chr2:21024950-21025882	chr2	+	21025128	21025852	True	NM_021925,NM_182828	chr2,chr2	-,+	C2orf43,GDF7	-2301,-158756
chr17:74073759-74074042	chr17	+	74073811	74074019	True	NM_003857,NM_180990,NM_014230	chr17,chr17,chr17	+,+,-	GALR2,ZACN,SRP68	-2971,1243,-5204
chr16:3661957-3662342	chr16	+	3662153	3662227	True	NM_005223,NM_032444	chr16,chr16	+,-	DNASE1,SLX4	40712,-568
chr1:150483694-150484066	chr1	+	150483723	150483989	True	NM_004425,NM_001202858,NM_001197320,NM_022664	chr1,chr1,chr1,chr1	+,+,-,+	ECM1,ECM1,MCL1,ECM1	-3287,-3287,68275,-3287
chr2:91755433-91755747	chr10	+	43359752	43359802	True	NM_014753,NM_006955	chr10,chr10	+,-	BMS1,ZNF33B	-81849,-225760
chr2:91755433-91755747	chr2	+	91755482	91755790	False	NR_003503,NR_027238	chr2,chr2	+,-	GGT8P,LOC654342	207577,92248
chr2:91755433-91755747	chr2	-	87571170	87571324	False	NR_026846,NR_024204	chr2,chr2	-,+	LOC285074,NCRNA00152	-267634,183649
chr2:91755433-91755747	chr2	-	90279260	90279414	False	NM_004836,NR_015424	chr2,chr2	-,+	EIF2AK3,ANKRD36BP2	-1352166,-1213892
chr11:36346771-36347443	chr11	+	36346779	36347494	True	NM_014186,NM_001160167	chr11,chr11	-,+	COMMD9,PRR5L	-35780,-29105
chr15:62354232-62356126	chr15	+	62354330	62356026	True	NM_017684,NM_001018088,NM_018080,NM_020821,NM_207322	chr15,chr15,chr15,chr15,chr15	-,-,-,-,+	VPS13C,VPS13C,VPS13C,VPS13C,C2CD4A	-1666,-1666,-1666,-1666,3149
chr17:45281485-45282521	chr17	+	45281492	45282540	True	NM_002476,NM_001002841,NM_001256	chr17,chr17,chr17	+,+,-	MYL4,MYL4,CDC27	4173,3887,-14827
chr4:7069626-7069934	chr4	+	7069825	7069911	True	NM_152293,NM_025196	chr4,chr4	+,-	TADA2B,GRPEL1	-24720,-25
chr17:17736816-17737016	chr17	+	17736823	17736919	True	NM_001005291,NM_004176,NM_001130091	chr17,chr17,chr17	-,-,+	SREBF1,SREBF1,LRRC48	3466,3466,139207
chr18:3847390-3848730	chr18	+	3847606	3848749	True	NR_024101,NM_001003809	chr18,chr18	+,-	FLJ35776,DLGAP1	-253548,-2310
chr13:41345545-41345827	chr13	+	41345569	41345715	True	NM_005830,NM_014252	chr13,chr13	-,+	MRPS31,SLC25A15	-222,17831
chr14:39585044-39585711	chr14	+	39585077	39585602	True	NM_006364,NM_003616,NM_001009183,NM_001009182	chr14,chr14,chr14,chr14	-,+,+,+	SEC23A,SIP1,SIP1,SIP1	-12640,-1641,-1641,-1641
chr3:194184744-194185486	chr3	+	194185043	194185439	True	NR_033929,NM_024524	chr3,chr3	+,-	FLJ34208,ATP13A3	22429,3585
chr22:41763074-41763332	chr22	+	41763111	41763283	True	NM_001145398,NM_016272	chr22,chr22	+,-	TEF,TOB2	108,79794
chr7:150105711-150106001	chr7	+	150105725	150106001	True	NR_027237,NM_002889	chr7,chr7	+,-	LOC728743,RARRES2	-2936,-66962
chr5:1552734-1553037	chr5	+	1552740	1553020	True	NM_024830,NM_004553	chr5,chr5	-,+	LPCAT1,NDUFS6	-28664,248475
chr3:10030954-10031867	chr3	+	10031389	10031710	True	NM_018447,NM_033084	chr3,chr3	-,+	TMEM111,FANCD2	-2867,36402
chr17:10590763-10592153	chr17	+	10590782	10592155	True	NM_004589,NM_020233	chr17,chr17	-,+	SCO1,C17orf48	8793,8771
chr17:4464034-4464292	chr17	+	4464061	4464275	True	NM_198501,NM_001105538,NM_014520,NM_153338,NM_001122890	chr17,chr17,chr17,chr17,chr17	+,-,-,-,-	SMTNL2,MYBBP1A,MYBBP1A,GGT6,GGT6	23000,-5380,-5380,-185,-185
chr6:116573429-116574133	chr6	+	116573455	116574153	True	NM_021648,NM_001080976	chr6,chr6	-,+	TSPYL4,DSE	1158,27129
chr19:45826628-45826861	chr19	+	45826717	45826904	True	NM_001824,NM_177417	chr19,chr19	-,+	CKM,KLC3	-484,17093
chr4:37018687-37019542	chr4	+	37018713	37019529	True	NM_001085399,NM_001144990	chr4,chr4	-,+	RELL1,KIAA1239	668520,227160
chr3:146252358-146252585	chr3	+	146252366	146252433	True	NM_003412,NM_021105	chr3,chr3	+,-	ZIC1,PLSCR1	874747,10246
chrX:153058139-153059274	chrX	+	153058177	153059319	True	NM_001204526,NM_001204527,NM_174869,NR_037927,NM_004135,NM_006280	chrX,chrX,chrX,chrX,chrX,chrX	+,+,-,+,-,+	SSR4,SSR4,IDH3G,SSR4,IDH3G,SSR4	584,310,698,584,698,699
chr1:1654880-1655394	chr1	+	1655112	1655368	True	NM_024011,NM_033489,NM_033488,NR_002946,NM_033487,NM_033486,NM_033492,NM_033493,NM_033529	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,-,-,-,-	CDK11A,CDK11B,CDK11B,MMP23A,CDK11B,CDK11B,CDK11B,CDK11B,CDK11A	473,457,457,-23793,457,457,457,457,473
chr1:1654880-1655394	chr1	+	1589790	1590046	False	NM_001110781,NR_002946	chr1,chr1	-,+	SLC35E2B,MMP23A	34247,-21690
chr21:43615594-43617050	chr21	+	43615613	43616747	True	NR_027243,NM_207627,NM_207628	chr21,chr21,chr21	-,+,+	C21orf128,ABCG1,ABCG1	-86969,3051,3174
chr20:896685-897058	chr20	+	896714	897048	True	NM_015985,NM_031424	chr20,chr20	-,+	ANGPT4,FAM110A	0,-71480
chr4:56759376-56760345	chr4	+	56759638	56760136	True	NM_006681,NM_178237	chr4,chr4	-,+	NMU,EXOC1	-257173,-39877
chr4:2755445-2756234	chr4	+	2755481	2756034	True	NM_001122681,NM_001161527,NM_024309	chr4,chr4,chr4	+,-,-	SH3BP2,TNIP2,TNIP2	38715,1775,2126
chr17:18162087-18162370	chr17	+	18162217	18162367	True	NM_001144900,NM_148886,NM_002018,NM_139162	chr17,chr17,chr17,chr17	+,+,-,+	SMCR7,SMCR7,FLII,SMCR7	1480,2056,-162,1480
chr12:58161987-58163656	chr12	+	58162078	58163694	True	NM_000785,NM_023033,NM_005371,NM_015433,NM_206914	chr12,chr12,chr12,chr12,chr12	-,-,-,+,+	CYP27B1,METTL1,METTL1,METTL21B,METTL21B	-1102,2270,2270,2688,2688
chrX:151805267-151806147	chrX	+	151805287	151806008	True	NM_001129826,NM_018558	chrX,chrX	-,+	CSAG3,GABRQ	71712,628
chr15:42696346-42697599	chr15	+	42696446	42697262	True	NM_022473,NM_173090,NM_173088,NM_173089	chr15,chr15,chr15,chr15	-,+,+,+	ZFP106,CAPN3,CAPN3,CAPN3	52518,-84,-1910,-84
chr4:148540639-148541738	chr4	+	148540920	148541646	True	NM_018241,NM_138364	chr4,chr4	+,-	TMEM184C,PRMT10	-2432,63684
chr1:31197381-31199113	chr1	+	31197577	31198907	True	NR_034182,NM_002379	chr1,chr1	+,-	LOC100129196,MATN1	-6010,-1145
chr8:52701959-52703187	chr8	+	52701998	52703215	True	NM_144651,NM_005285	chr8,chr8	-,+	PXDNL,NPBWR1	18840,1149252
chr22:39103873-39105005	chr22	+	39103873	39104891	True	NM_014876,NM_004286	chr22,chr22	-,+	JOSD1,GTPBP1	-7414,-2119
chr7:74282348-74282980	chr7	+	74282485	74282884	True	NM_173537,NR_027775	chr7,chr7	-,+	GTF2IRD2,PMS2P5	-14644,24009
chr7:74282348-74282980	chr7	-	74493345	74493672	False	NM_030798,NM_001003795	chr7,chr7	-,+	WBSCR16,GTF2IRD2B	-3646,14674
chr15:35085545-35086944	chr15	+	35085802	35086828	True	NR_003144,NM_005159	chr15,chr15	+,-	LOC723972,ACTC1	442698,1149
chr5:180673219-180673434	chr5	+	180673219	180673385	True	NR_002592,NM_006098,NR_002591,NM_201627	chr5,chr5,chr5,chr5	-,-,-,+	SNORD96A,GNB2L1,SNORD95,TRIM41	-4330,-2313,-2843,-22964
chr21:38735312-38736650	chr21	+	38735725	38736675	True	NM_101395,NM_006052	chr21,chr21	+,-	DYRK1A,DSCR3	3183,-95892
chr15:50474966-50476071	chr15	+	50475007	50475949	True	NM_003645,NM_001159629,NM_024837	chr15,chr15,chr15	+,+,-	SLC27A2,SLC27A2,ATP8B4	-665,-665,-63588
chr12:570710-570986	chr12	+	570713	571019	True	NM_001042603,NM_173593	chr12,chr12	-,+	KDM5A,B4GALNT3	-72093,-1221
chr10:42857101-42857932	chr10	+	42857410	42857966	True	NR_024380,NR_026827	chr10,chr10	-,+	LOC441666,LOC84856	5577,112972
chr10:21432300-21433374	chr10	+	21432413	21433319	True	NM_001177483,NM_001010896,NM_001195627	chr10,chr10,chr10	-,-,+	C10orf113,C10orf113,MLLT10	2219,2219,389781
chrX:119499715-119500385	chrX	+	119499761	119500421	True	NM_017938,NM_001142447,NM_012069	chrX,chrX,chrX	-,+,+	FAM70A,ATP1B4,ATP1B4	-54370,-3884,-3884
chr1:20831672-20833234	chr1	+	20831703	20832904	True	NM_024544,NM_207334	chr1,chr1	-,+	MUL1,FAM43B	1820,46027
chrX:130201495-130201983	chrX	+	130201563	130201900	True	NM_144967,NM_182314	chrX,chrX	+,-	ARHGAP36,ENOX2	-9398,-164355
chr4:166032342-166033393	chr4	+	166032573	166033368	True	NM_001100389,NM_152620	chr4,chr4	-,+	TMEM192,TRIM60	707,-79480
chr1:48459680-48460163	chr1	+	48459822	48460150	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	2462,228206
chr4:87300347-87300690	chr4	+	87300351	87300439	True	NM_138982,NM_006264	chr4,chr4	-,+	MAPK10,PTPN13	-18976,215028
chr15:90931759-90931967	chr15	+	90931892	90931972	True	NR_028287,NM_003870	chr15,chr15	-,+	GABARAPL3,IQGAP1	-39213,-470
chr1:33117748-33118412	chr1	+	33117792	33117981	True	NM_001135255,NM_001135256,NM_005610,NM_178547	chr1,chr1,chr1,chr1	+,+,+,-	RBBP4,RBBP4,RBBP4,ZBTB8OS	-1098,-888,-1098,-1607
chr6:52535962-52537267	chr6	+	52536315	52537301	True	NM_014051,NR_024405,NR_033760,NR_024403	chr6,chr6,chr6,chr6	+,+,-,+	TMEM14A,LOC730101,GSTA7P,LOC730101	-482,-7167,72706,-7167
chr8:9761139-9761343	chr8	+	9761179	9761269	True	NR_024281,NM_001135670,NR_029668	chr8,chr8,chr8	-,+,-	LOC157627,MSRA,MIR124-1	-340,150560,-197
chr17:18904187-18906170	chr17	+	18904423	18905993	True	NM_001039999,NM_152351	chr17,chr17	-,+	FAM83G,SLC5A10	2117,-48996
chr17:40333044-40333332	chr17	+	40333105	40333310	True	NM_001524,NM_033194,NM_012285	chr17,chr17,chr17	-,+,-	HCRT,HSPB9,KCNH4	4210,-58400,36
chr3:53386093-53386787	chr3	+	53386199	53386639	True	NM_018403,NM_000720	chr3,chr3	-,+	DCP1A,CACNA1D	-4545,142391
chr19:22811877-22813110	chr19	+	22812027	22812838	True	NM_020855,NM_001080409	chr19,chr19	+,-	ZNF492,ZNF99	4287,140009
chr15:22891577-22892072	chr15	+	22891654	22892056	True	NM_014608,NM_001008860	chr15,chr15	+,-	CYFIP1,NIPA2	627,142421
chr19:11649733-11649970	chr19	+	11649750	11649816	True	NM_001142464,NM_001142465,NM_016581,NM_001299	chr19,chr19,chr19,chr19	-,-,-,+	ECSIT,ECSIT,ECSIT,CNN1	-9763,-9763,-9763,-222
chr6:168479850-168480484	chr6	+	168479909	168480433	True	NM_030615,NM_001122841,NM_024919	chr6,chr6,chr6	+,-,-	KIF25,FRMD1,FRMD1	-61407,-3377,-70
chr19:42188545-42189028	chr19	+	42188550	42188984	True	NM_004363,NM_006890	chr19,chr19	+,-	CEACAM5,CEACAM7	23545,3162
chr19:42027730-42028379	chr19	+	42027730	42028336	True	NM_001098506,NR_030765	chr19,chr19	+,-	CEACAM21,ATP5SL	54194,-81887
chr16:8350792-8351483	chr16	+	8350908	8351513	True	NM_001146336,NM_024109	chr16,chr16	-,+	TMEM114,METTL22	270764,364013
chr19:50978199-50978436	chr19	+	50978252	50978478	True	NM_138411,NM_175063,NM_206538	chr19,chr19,chr19	-,+,+	FAM71E1,C19orf63,C19orf63	1575,1257,1257
chr1:24049084-24049978	chr1	+	24049310	24050019	True	NM_003198,NM_001127621	chr1,chr1	+,-	TCEB3,GALE	19836,76097
chr1:31226945-31228536	chr1	+	31227008	31228529	True	NM_006762,NR_034182	chr1,chr1	-,+	LAPTM5,LOC100129196	2204,-35440
chr22:22877360-22878242	chr22	+	22877500	22878054	True	NM_080740,NR_027426	chr22,chr22	-,+	ZNF280A,LOC648691	-2887,23701
chr16:1292168-1292465	chr16	+	1292173	1292485	True	NM_024164,NM_003294	chr16,chr16	-,+	TPSB2,TPSAB1	-11988,-1546
chr16:1292168-1292465	chr16	-	1278663	1278717	False	NM_012467,NM_024164,NM_003294	chr16,chr16,chr16	-,-,+	TPSG1,TPSB2,TPSAB1	-3409,1518,11960
chr16:1292168-1292465	chr16	+	1308429	1308483	False	NM_024164,NM_012217	chr16,chr16	-,+	TPSB2,TPSD1	-28244,-2207
chr17:10739513-10740512	chr17	+	10739576	10740404	True	NM_020233,NM_001101387	chr17,chr17	+,-	C17orf48,PIRT	-138700,1064
chr2:203879771-203880026	chr2	+	203879812	203880060	True	NM_018256,NM_001114132	chr2,chr2	-,+	WDR12,NBEAL1	-102863,-261
chr10:35895671-35896615	chr10	+	35895707	35896641	True	NM_153368,NM_031866	chr10,chr10	+,-	GJD4,FZD8	-1422,33771
chr2:219036395-219038290	chr2	+	219036394	219038007	True	NM_000634,NM_152862	chr2,chr2	-,+	CXCR1,ARPC2	-4678,43866
chr5:177302869-177303620	chr5	+	177303152	177303644	True	NR_003615,NM_173663	chr5,chr5	+,-	LOC728554,FAM153A	-941,-95647
chr5:177302869-177303620	chr5	-	175394158	175394392	False	NM_032361,NM_001008220	chr5,chr5	-,+	THOC3,CPLX2	1211,-95708
chr6:168424269-168425355	chr6	+	168424478	168425332	True	NM_030615,NM_005355,NM_001129895	chr6,chr6,chr6	+,+,-	KIF25,KIF25,HGC6.3	-5976,-5976,-46859
chr8:11997454-11997850	chr8	+	11997514	11997723	True	NM_201402,NR_027425	chr8,chr8	-,+	USP17L2,FAM66D	-1245,-24281
chr12:104684830-104685547	chr12	+	104684853	104684925	True	NM_006166,NM_003330,NM_182743,NM_182729,NM_182742	chr12,chr12,chr12,chr12,chr12	-,+,+,+,+	NFYB,TXNRD1,TXNRD1,TXNRD1,TXNRD1	-152813,-4177,-4177,-4177,-4177
chr1:153537642-153538291	chr1	+	153537806	153538138	True	NM_006271,NM_005978	chr1,chr1	+,-	S100A1,S100A2	62734,218
chr17:42386512-42387300	chr17	+	42386538	42387338	True	NM_001144826,NM_001143780,NM_001144825,NM_006695	chr17,chr17,chr17,chr17	+,-,+,+	RUNDC3A,SLC25A39,RUNDC3A,RUNDC3A	-662,14929,-662,-662
chr12:101685052-101685849	chr12	+	101685342	101685790	True	NM_014503,NM_145913	chr12,chr12	+,-	UTP20,SLC5A8	-11495,-81326
chr1:171111430-171112399	chr1	+	171111468	171112434	True	NR_002601,NR_031627	chr1,chr1	+,-	FMO6P,MIR1295	-4641,-40521
chr10:115997006-115997556	chr10	+	115997005	115997430	True	NM_198496,NM_018017	chr10,chr10	+,-	VWA2,C10orf118	1587,-62641
chr15:22705872-22706197	chr15	+	22705900	22706210	True	NR_027407,NM_001001413	chr15,chr15	-,+	GOLGA8DP,GOLGA6L1	9568,30035
chr15:22705872-22706197	chr15	-	28633314	28633624	False	NM_004667,NR_033351,NR_033353	chr15,chr15,chr15	-,+,+	HERC2,GOLGA8F,GOLGA8G	-66019,-9581,-9581
chr15:22705872-22706197	chr15	+	28768303	28768613	False	NR_036443,NR_033351,NR_033353	chr15,chr15,chr15	+,-,-	HERC2P9,GOLGA8F,GOLGA8G	130974,9580,9580
chr15:22705872-22706197	chr15	-	20777169	20777479	False	NM_001145004,NR_027411	chr15,chr15	-,+	GOLGA6L6,GOLGA8C	-30055,-9546
chr15:22705872-22706197	chr15	-	23444567	23444877	False	NR_002824,NR_033350	chr15,chr15	-,+	HERC2P2,GOLGA8E	-66308,-9548
chr4:187162495-187163389	chr4	+	187162503	187163014	True	NR_033900,NM_000892	chr4,chr4	-,+	LOC285441,KLKB1	259259,-13882
chr5:78530729-78531580	chr5	+	78530842	78531594	True	NM_013391,NM_152405	chr5,chr5	-,+	DMGDH,JMY	-165393,330
chr9:21801892-21802217	chr9	+	21801985	21802247	True	NM_058197,NM_002451	chr9,chr9	-,+	CDKN2A,MTAP	172629,387
chr17:80330182-80330682	chr17	+	80330396	80330722	True	NM_003004,NM_018949	chr17,chr17	-,+	SECTM1,UTS2R	-38475,1478
chr8:95199608-95200011	chr8	+	95199649	95199983	True	NM_004063,NM_001161778	chr8,chr8	-,+	CDH17,PDP1	20882,-269716
chr10:80830527-80830922	chr10	+	80830664	80830744	True	NR_024429,NR_015429,NR_024431,NM_020338	chr10,chr10,chr10,chr10	-,-,-,+	LOC283050,LOC283050,LOC283050,ZMIZ1	-3459,-3459,-3459,-1923
chr20:35376491-35377306	chr20	+	35376593	35377176	True	NM_032013,NM_080628,NM_022477	chr20,chr20,chr20	-,+,-	NDRG3,C20orf118,NDRG3	-2112,127393,-2112
chr5:173492361-173493798	chr5	+	173492416	173493783	True	NM_138369,NM_015980	chr5,chr5	-,+	BOD1,HMP19	-448750,-19751
chr7:30027386-30028082	chr7	+	30027395	30028110	True	NM_001197026,NM_001145513,NM_001145515,NM_014766,NM_001145514	chr7,chr7,chr7,chr7,chr7	+,-,-,-,-	PLEKHA8,SCRN1,SCRN1,SCRN1,SCRN1	39866,1674,1365,1365,1845
chr11:130652009-130653056	chr11	+	130652019	130653010	True	NM_139055,NM_014758	chr11,chr11	+,-	ADAMTS15,SNX19	-333201,133423
chr7:10982613-10983499	chr7	+	10982742	10983280	True	NM_002489,NM_014660	chr7,chr7	-,+	NDUFA4,PHF14	-2929,30218
chr21:40812436-40813049	chr21	+	40812480	40812990	True	NM_001001713,NM_152505	chr21,chr21	+,-	SH3BGR,LCA5L	4806,3188
chr6:28236813-28237880	chr6	+	28237185	28237581	True	NM_001111039,NM_001023560,NM_019110,NM_152736	chr6,chr6,chr6,chr6	+,+,-,+	ZNF187,ZNF187,ZKSCAN4,ZNF187	-2458,-2458,-17183,-2458
chr9:99798966-99800897	chr9	+	99798985	99800717	True	NM_001333,NM_001045477,NM_001201575	chr9,chr9,chr9	-,+,-	CTSL2,FAM22G,CTSL2	925,-107751,1258
chr22:22238924-22239678	chr18	+	11891056	11891170	False	NM_023075,NM_020412	chr18,chr18	-,+	MPPE1,CHMP1B	17529,-39723
chr22:22238924-22239678	chr22	+	22239128	22239362	True	NM_148176,NM_138957	chr22,chr22	+,-	PPIL2,MAPK1	-218910,-17158
chr3:58520225-58520877	chr3	+	58520292	58520876	True	NM_003500,NM_153331	chr3,chr3	-,+	ACOX2,KCTD6	2103,-36251
chr3:10151797-10152166	chr3	+	10151817	10151973	True	NM_173472,NM_018462,NM_001164839	chr3,chr3,chr3	-,+,-	C3orf24,C3orf10,C3orf24	-1902,5359,-1902
chr3:33315071-33315999	chr3	+	33315124	33316039	True	NM_012157,NM_015551,NM_001171713	chr3,chr3,chr3	+,-,+	FBXL2,SUSD5,FBXL2	2894,-54417,2897
chr19:15591176-15591856	chr19	+	15591326	15591560	True	NM_173483,NM_052890	chr19,chr19	+,-	CYP4F22,PGLYRP2	27775,-1011
chr5:61718531-61719680	chr5	+	61718535	61719539	True	NM_014473,NM_001134779	chr5,chr5	-,+	DIMT1L,IPO11	-18807,-3875
chr5:169759475-169760379	chr5	+	169759576	169760415	True	NR_026945,NM_005565	chr5,chr5	+,-	LOC257358,LCP2	-1193,-34754
chr1:26668981-26669343	chr1	+	26669193	26669277	True	NM_001039775,NM_001803	chr1,chr1	-,+	AIM1L,CD52	11394,-24833
chr17:61949659-61950115	chr17	+	61949774	61950056	True	NM_020991,NM_022645,NM_022644,NM_022557,NM_022556,NR_002947,NM_002059,NM_022558	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,+,-,-	CSH2,CSH2,CSH2,GH2,GH2,TCAM1P,GH2,GH2	1083,1083,1083,9217,9217,-15449,9217,9217
chr17:61949659-61950115	chr17	+	61972686	61972952	False	NM_022641,NM_022640,NR_002947,NM_001317	chr17,chr17,chr17,chr17	-,-,+,-	CSH1,CSH1,TCAM1P,CSH1	1119,1119,-38361,1119
chr17:74537851-74538733	chr17	+	74538008	74538516	True	NM_134268,NM_001077620	chr17,chr17	-,+	CYGB,PRCD	-4226,-1938
chr2:109066770-109067057	chr2	+	109066771	109067042	True	NR_028063,NM_022336,NM_181453	chr2,chr2,chr2	+,-,+	GCC2,EDAR,GCC2	-1252,538849,-1252
chr8:74888411-74888611	chr8	+	74888422	74888592	True	NM_001204858,NM_001204859,NM_001204857,NM_017866,NM_001204861,NR_033334,NM_001204863,NM_001204862,NM_005648,NM_001204860,NM_001204864,NM_001040613	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,+,-,+,-,-,-,-,-,+	TCEB1,TCEB1,TCEB1,TMEM70,TCEB1,TMEM70,TCEB1,TCEB1,TCEB1,TCEB1,TCEB1,TMEM70	-3900,-3900,-3900,-96,-4279,-96,-3900,-4279,-3900,-3900,-3900,-96
chr2:160145376-160146086	chr2	+	160145529	160145888	True	NM_001128213,NM_001128212,NM_033394,NM_152528	chr2,chr2,chr2,chr2	-,-,+,-	WDSUB1,WDSUB1,TANC1,WDSUB1	-2426,-2293,-320434,-2466
chr1:33355909-33356588	chr1	+	33355928	33356630	True	NM_033504,NM_002143	chr1,chr1	-,+	TMEM54,HPCA	10373,-3888
chr13:49818990-49820227	chr13	+	49819036	49820102	True	NM_001193478,NM_030925,NM_030911,NR_036439	chr13,chr13,chr13,chr13	+,-,+,+	CDADC1,CAB39L,CDADC1,CDADC1	1944,155683,1944,1944
chrY:24329121-24330041	chrY	+	24329413	24329491	True	NM_001006117,NR_002175,NM_152585	chrY,chrY,chrY	-,+,-	RBMY1J,TTTY6B,RBMY1F	-324,-38330,-324
chrY:24329121-24330041	chrY	-	24549220	24549298	False	NM_001006117,NR_002175	chrY,chrY	+,-	RBMY1J,TTTY6B	324,38336
chr1:155528775-155529049	chr1	+	155528916	155529055	True	NR_027023,NM_018489	chr1,chr1	+,-	LOC645676,ASH1L	2716,3320
chr2:74534799-74535016	chr2	+	74534807	74534929	True	NR_024463,NM_021196	chr2,chr2	+,-	LOC100189589,SLC4A5	77915,7273
chr5:118794128-118794981	chr5	+	118794268	118794997	True	NM_173666,NM_000414,NM_001199292,NM_001199291	chr5,chr5,chr5,chr5	-,+,+,+	DTWD2,HSD17B4,HSD17B4,HSD17B4	-470028,-6181,-6181,-6117
chr1:149911683-149913183	chr1	+	149911868	149913198	True	NM_181873,NM_016074,NM_001145862	chr1,chr1,chr1	-,+,-	MTMR11,BOLA1,MTMR11	-3602,-40764,-3077
chr14:105266141-105266482	chr14	+	105266175	105266450	True	NM_005163,NM_001137601,NM_001014431,NM_001014432	chr14,chr14,chr14,chr14	-,+,-,-	AKT1,ZBTB42,AKT1,AKT1	-6237,482,-4095,-4095
chr11:71790553-71791016	chr11	+	71790596	71791034	True	NM_006185,NR_036123,NM_145309,NM_001145310,NR_026886,NM_001205138,NM_001145307,NM_001145308,NM_001145309	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,+,+,+,+,+,+,+	NUMA1,MIR3165,LRTOMT,LRTOMT,LRTOMT,LRTOMT,LRTOMT,LRTOMT,LRTOMT	589,-7248,342,347,658,342,342,342,347
chr13:19784724-19786579	chr13	+	19784983	19786453	True	NM_006001,NR_034026	chr13,chr13	-,+	TUBA3C,LOC100287114	-28991,132735
chr13:95951367-95952254	chr13	+	95951542	95952089	True	NM_001105515,NM_005845,NM_001160100	chr13,chr13,chr13	-,-,+	ABCC4,ABCC4,CLDN10	1648,1648,133763
chr12:10658471-10659262	chr12	+	10658555	10659153	True	NM_213658,NM_007334	chr12,chr12	-,+	KLRC1,KLRD1	-51340,-198189
chr15:79528589-79528858	chr15	+	79528653	79528828	True	NR_029705,NM_002891	chr15,chr15	+,-	MIR184,RASGRF1	-26578,-145438
chr22:19940084-19940620	chr22	+	19940527	19940611	True	NM_001135162,NM_001135161,NM_007310,NM_006440	chr22,chr22,chr22,chr22	+,+,+,-	COMT,COMT,COMT,TXNRD2	-1534,-2119,9458,-11168
chr16:29789261-29790925	chr16	+	29789407	29790973	True	NM_175900,NM_152338	chr16,chr16	-,+	C16orf54,ZG16	-32067,103
chr9:88709069-88709852	chr9	+	88709097	88709509	True	NM_177937,NM_024635,NM_016548	chr9,chr9,chr9	-,+,-	GOLM1,NAA35,GOLM1	5659,-153103,5053
chr7:130022123-130022463	chr7	+	130022225	130022321	True	NM_001868,NM_018718	chr7,chr7	+,-	CPA1,TSGA14	-1986,58589
chr10:45647036-45647545	chr10	+	45647040	45647516	True	NR_033891,NR_024472	chr10,chr10	+,-	LOC338579,LOC100133308	2593,2578
chr1:219647323-219648742	chr1	+	219647784	219648422	True	NM_138794,NM_018713	chr1,chr1	+,-	LYPLAL1,SLC30A10	-300648,453629
chr17:44666912-44667674	chr17_ctg5_hap1	-	380999	381633	False	NM_006178,NM_001113738,NM_001039083,NM_016632,NM_001103154,NR_033799	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	-,+,+,+,+,-	NSF,ARL17A,ARL17B,ARL17A,ARL17B,NSFP1	-384,9949,9978,9949,9978,-446
chr17:44666912-44667674	chr17_ctg5_hap1	+	1523832	1524466	False	NM_016632	chr17_ctg5_hap1	-	ARL17A	-9948
chr17:44666912-44667674	chr17	+	44667019	44667653	True	NM_001113738,NM_006178,NM_016632,NR_033799	chr17,chr17,chr17,chr17	-,+,-,+	ARL17A,NSF,ARL17A,NSFP1	-9931,384,-9931,446
chr17:44666912-44667674	chr17	+	44449098	44449732	False	NM_001039083,NM_001113738,NM_001103154,NR_033799,NM_016632	chr17,chr17,chr17,chr17,chr17	-,-,-,+,-	ARL17B,ARL17A,ARL17B,NSFP1,ARL17A	-9964,-9935,-9964,446,-9935
chr6:26521230-26521630	chr6	+	26521237	26521679	True	NR_026790,NM_024639	chr6,chr6	+,-	HCG11,ZNF322A	254,138339
chr7:64603234-64603569	chr7	+	64603509	64603572	True	NR_027393,NM_001007253	chr7,chr7	+,-	INTS4L1,ERV3	-1960,-136385
chr17:27057397-27057990	chr17	+	27057582	27057652	True	NR_000014,NM_178170,NR_000010,NM_138463,NM_001160407,NR_000009	chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,-,-,+	SNORD42A,NEK8,SNORD4A,TLCD1,TLCD1,SNORD4B	-7186,-1801,-8033,-4352,-3633,-6934
chr1:24650567-24651113	chr1	+	24650566	24651158	True	NM_198173,NM_021180,NM_001195010,NM_001199013,NM_198174	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	GRHL3,GRHL3,GRHL3,C1orf201,GRHL3	-4806,-1088,-4562,89154,-4806
chr8:59570055-59571545	chr8	+	59570147	59571337	True	NM_005625,NM_003580,NM_001144772	chr8,chr8,chr8	+,-,-	SDCBP,NSMAF,NSMAF	-104470,1117,679
chr19:54986816-54987253	chr19	+	54986936	54987032	True	NM_052925,NM_145057	chr19,chr19	+,-	LENG8,CDC42EP5	-26929,-2514
chr16:33957990-33959407	chr16	+	33958974	33959358	True	NR_027080,NR_002837	chr16,chr16	+,-	LOC283914,UBE2MP1	638428,445454
chr15:84877878-84879093	chr15	+	84878056	84878750	True	NR_027001,NR_033738	chr15,chr15	-,+	LOC388152,LOC440300	20221,-17518
chr15:84877878-84879093	chr15	+	85757659	85757723	False	NM_006738,NM_014300	chr15,chr15	+,-	AKAP13,SEC11A	166147,-497985
chr15:84877878-84879093	chr15	+	82774072	82774133	False	NR_026811,NR_033579	chr15,chr15	-,+	LOC80154,LOC440297	24251,-20687
chr15:84877878-84879093	chr15	-	82965740	82965801	False	NR_026811,NR_033579	chr15,chr15	+,-	LOC80154,LOC440297	-20980,20687
chr15:84877878-84879093	chr15	+	83150656	83150717	False	NR_026811,NR_033579	chr15,chr15	-,+	LOC80154,LOC440297	32245,-20685
chr12:76424904-76425157	chr12	+	76424966	76425098	True	NM_007350,NM_006851	chr12,chr12	-,+	PHLDA1,GLIPR1	508,-550504
chr15:31393066-31393427	chr15	+	31393075	31393419	True	NM_014967,NM_002420	chr15,chr15	+,-	FAN1,TRPM1	-197050,555
chr15:21072658-21072983	chr18	+	14544208	14544526	False	NM_001137671,NM_001145029	chr18,chr18	-,+	POTEC,ANKRD30B	-609,203712
chr15:21072658-21072983	chr15	+	21072663	21072981	True	NM_207355,NR_027411	chr15,chr15	-,+	POTEB,GOLGA8C	-686,-305040
chr15:21072658-21072983	chr15	+	22083824	22084142	False	NR_015416,NM_207355	chr15,chr15	+,-	LOC727924,POTEB	193889,-687
chr15:21072658-21072983	chr21	-	14981153	14981471	False	NR_036164,NM_174981	chr21,chr21	-,+	MIR3156-3,POTED	-202372,1026
chr10:111986105-111987285	chr10	+	111986104	111987232	True	NM_005962,NM_005871	chr10,chr10	+,-	MXI1,SMNDC1	-393,77525
chr7:139540116-139540987	chr7	+	139540152	139540765	True	NR_029394,NM_022740	chr7,chr7	+,-	TBXAS1,HIPK2	-11254,-62459
chr17:46619966-46620411	chr17	+	46619983	46620378	True	NM_002145,NR_033201	chr17,chr17	-,+	HOXB2,LOC404266	2065,47444
chr3:50230283-50230568	chr3	+	50230350	50230608	True	NM_000172,NM_006764,NM_144499	chr3,chr3,chr3	+,-,+	GNAT1,IFRD2,GNAT1	-1365,99468,-1365
chr6:121649723-121651541	chr6	+	121649829	121651555	True	NM_152730,NM_000165	chr6,chr6	-,+	C6orf170,GJA1	4141,105189
chr18:64189646-64191136	chr18	+	64190044	64191075	True	NM_004361,NM_021153	chr18,chr18	+,-	CDH7,CDH19	-771949,80191
chr9:97352438-97352751	chr9	+	97352475	97352702	True	NM_003837,NM_001193331	chr9,chr9	-,+	FBP2,C9orf3	3430,136248
chr22:25029351-25030130	chr22	+	25029373	25029973	True	NR_024593,NR_024494	chr22,chr22	-,+	POM121L10P,BCRP3	25191,-542
chr22:25029351-25030130	chr22	-	24640499	24640549	False	NM_001099782,NM_001099781,NM_004121,NR_003714	chr22,chr22,chr22,chr22	-,-,-,+	GGT5,GGT5,GGT5,POM121L9P	611,611,611,7039
chr2:99758397-99759695	chr2	+	99758481	99759427	True	NM_182911,NM_144706	chr2,chr2	-,+	TSGA10,C2orf15	-444,-347
chr15:57670083-57670432	chr15	+	57670094	57670377	True	NM_032866,NR_015419	chr15,chr15	+,-	CGNL1,LOC145783	-1446,-459397
chr16:33205937-33206262	chr16	+	33205945	33206281	True	NM_001205260,NM_001205265,NM_001205259,NM_001099687,NM_016212,NR_033866	chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,-	LOC653550,TP53TG3B,LOC653550,TP53TG3B,TP53TG3,LOC390705	-411,-411,-411,-411,-1016,92471
chr16:33205937-33206262	chr16	+	33262480	33262816	False	NM_001205260,NM_001205265,NM_001205259,NM_001099687,NM_016212,NR_033866	chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,-	LOC653550,TP53TG3B,LOC653550,TP53TG3B,TP53TG3,LOC390705	-411,-411,-411,-411,-1016,35936
chr16:33205937-33206262	chr16	+	32265005	32265341	False	NR_033866,NM_003414	chr16,chr16	-,+	LOC390705,ZNF267	36011,-379977
chr16:33205937-33206262	chr16	-	32686751	32687087	False	NM_001205260,NM_016212,NM_001099687,NM_001205259,NM_001205265	chr16,chr16,chr16,chr16,chr16	-,-,-,-,-	LOC653550,TP53TG3,TP53TG3B,LOC653550,TP53TG3B	411,1016,411,411,411
chr10:18243476-18245101	chr10	+	18243475	18245050	True	NM_001145195,NM_014241,NM_152725	chr10,chr10,chr10	+,-,+	SLC39A12,PTPLA,SLC39A12	-2765,-584102,-2765
chr19:6883314-6883742	chr19	+	6883344	6883490	True	NR_024075,NM_001974	chr19,chr19	-,+	EMR4P,EMR1	107421,4091
chr8:144767729-144768358	chr8	+	144767847	144768137	True	NM_001162914,NM_001100598,NM_001100599,NM_173831	chr8,chr8,chr8,chr8	-,+,+,+	LOC100130274,ZNF707,ZNF707,ZNF707	22192,-1277,-1277,-1277
chr7:1610528-1611303	chr7	+	1610669	1610855	True	NM_001134340,NR_021487,NM_032302,NR_027328,NR_027329	chr7,chr7,chr7,chr7,chr7	-,+,-,+,+	PSMG3,KIAA1908,PSMG3,KIAA1908,KIAA1908	-1001,-1011,-1040,-1011,-1011
chr19:54929459-54930390	chr19	+	54929489	54930395	True	NM_001201461,NM_198988,NM_020659,NM_001005367	chr19,chr19,chr19,chr19	+,-,+,+	TTYH1,LENG9,TTYH1,TTYH1	-2935,44549,-2935,-2935
chr18:14486273-14486962	chr18	+	14486770	14486994	True	NR_024076,NR_026756	chr18,chr18	-,+	CXADRP3,LOC284233	11761,-149399
chr18:14486273-14486962	chr21	-	15038686	15038798	False	NR_026755,NM_174981	chr21,chr21	-,+	C21orf15,POTED	181937,-56239
chr1:205739198-205739937	chr1	+	205739201	205739948	True	NM_003929,NM_001135662,NM_001135663,NM_001135664,NM_181644	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	RAB7L1,RAB7L1,RAB7L1,RAB7L1,MFSD4	4713,4713,4713,4713,-201140
chr16:88801710-88802471	chr16	+	88801868	88802520	True	NM_178841,NM_001012762	chr16,chr16	-,+	RNF166,CTU2	-29039,-29028
chr14:20129070-20130274	chr22	+	16396966	16397117	False	NM_001005239,NR_001591	chr22,chr22	-,+	OR11H1,psiTPTE22	52748,685683
chr14:20129070-20130274	chr14	+	20129269	20130150	True	NM_001197287,NM_172194	chr14,chr14	-,+	OR11H2,OR4Q3	52391,85436
chr14:20129070-20130274	chr14	-	19430283	19430344	False	NM_001145442,NM_001013354	chr14,chr14	-,+	POTEM,OR11H12	589989,-52751
chr11:71157864-71158709	chr11	+	71157874	71158598	True	NM_018161,NM_001360,NM_001163817	chr11,chr11,chr11	+,-,-	NADSYN1,DHCR7,DHCR7	5618,929,929
chr19:5454877-5455215	chr19	+	5455078	5455168	True	NM_181710,NR_027064	chr19,chr19	+,-	ZNRF4,PLAC2	257,112887
chr3:157821476-157821818	chr3	+	157821521	157821833	True	NM_001163678,NM_003030,NM_006884,NM_016625	chr3,chr3,chr3,chr3	-,-,-,+	SHOX2,SHOX2,SHOX2,RSRC1	2169,2169,2169,6058
chr17:35731991-35732793	chr17	+	35732518	35732814	True	NM_198836,NM_173625	chr17,chr17	-,+	ACACA,C17orf78	-16459,170
chr10:1108176-1108747	chr10	+	1108178	1108705	True	NM_004508,NM_014023	chr10,chr10	-,+	IDI1,WDR37	-13117,-5455
chr12:6582928-6584510	chr12	+	6583130	6583696	True	NM_014865,NM_014231,NM_016830,NM_199245	chr12,chr12,chr12,chr12	+,-,-,-	NCAPD2,VAMP1,VAMP1,VAMP1	19601,-3287,-3287,-3287
chr13:28675049-28676485	chr13	+	28675155	28675611	True	NM_004119,NM_175854	chr13,chr13	-,+	FLT3,PAN3	-426,37031
chr16:50784841-50786639	chr16	+	50784888	50786673	True	NM_001042355,NM_015247,NM_001042412,NM_182854	chr16,chr16,chr16,chr16	+,+,+,-	CYLD,CYLD,CYLD,SNX20	-8993,-8993,-8925,-69624
chr7:151137574-151139550	chr7	+	151137791	151139458	True	NR_034013,NM_144727,NR_037468	chr7,chr7,chr7	+,-,-	LOC100131176,CRYGN,MIR3907	-31520,-692,-7066
chr15:83317798-83318468	chr15	+	83317814	83318508	True	NM_030594,NR_003011	chr15,chr15	-,+	CPEB1,SCARNA15	-1086,106188
chr1:19987849-19989407	chr1	+	19987985	19989455	True	NM_181719,NM_000871	chr1,chr1	-,+	TMCO4,HTR6	137005,2324
chr12:11183659-11183978	chr12	+	11183658	11184000	True	NM_176888,NM_001110213,NM_176885	chr12,chr12,chr12	-,+,-	TAS2R19,PRH2,TAS2R31	-8488,-101881,56
chr15:70394513-70396052	chr15	+	70394518	70395668	True	NM_020908,NM_001105192,NM_005078,NR_026764	chr15,chr15,chr15,chr15	-,-,-,+	TLE3,TLE3,TLE3,C15orf50	-4262,-4262,-4262,-266996
chr6:57036788-57037114	chr6	+	57036787	57036997	True	NM_183227,NM_004282	chr6,chr6	-,+	RAB23,BAG2	49310,106
chr1:19218644-19219191	chr1	+	19218746	19219154	True	NM_001161504,NM_001135254	chr1,chr1	-,+	ALDH4A1,PAX7	-1361,-261297
chr6:43269819-43270149	chr6	+	43269831	43270103	True	NM_006672,NM_153320,NM_206922	chr6,chr6,chr6	+,+,-	SLC22A7,SLC22A7,CRIP3	-3884,-3884,6477
chr5:148758558-148759076	chr5	+	148758572	148758894	True	NM_024028,NM_014443	chr5,chr5	+,-	PCYOX1L,IL17B	-21053,2
chr5:42808944-42810652	chr5	+	42809136	42810333	True	NM_001093726,NM_005410,NM_001085486,NM_001134848	chr5,chr5,chr5,chr5	-,-,-,+	SEPP1,SEPP1,SEPP1,CCDC152	1752,1752,1752,-52267
chr17:3210574-3211014	chr17	+	3210605	3211027	True	NM_002550,NR_024128	chr17,chr17	-,+	OR3A1,OR3A4	-14729,2511
chr5:135165887-135166465	chr5	+	135165898	135166504	True	NM_145282,NM_000590	chr5,chr5	+,-	SLC25A48,IL9	3860,65062
chr20:62667880-62668515	chr20	+	62668081	62668358	True	NR_027687,NR_027686,NM_018419	chr20,chr20,chr20	+,+,-	NCRNA00176,NCRNA00176,SOX18	-2435,-2435,12672
chr7:126891698-126891907	chr7	+	126891796	126891956	True	NR_028041,NM_000845,NM_001127323,NM_001662	chr7,chr7,chr7,chr7	-,-,-,+	GRM8,GRM8,GRM8,ARF5	-8227,-8227,522,336449
chr2:23683925-23684489	chr2	+	23684002	23684506	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	465478,-75761
chr15:64792879-64794654	chr15	+	64792900	64794655	True	NM_015042,NM_014736	chr15,chr15	+,-	ZNF609,KIAA0101	-1341,-119198
chr5:138876925-138877800	chr5	+	138876962	138877842	True	NM_198282,NM_003339	chr5,chr5	-,+	TMEM173,UBE2D2	-14619,62908
chr10:27702283-27702647	chr10	+	27702329	27702579	True	NM_021252,NM_001034842	chr10,chr10	+,-	RAB18,PTCHD3	90669,768
chr20:1306378-1306616	chr20	+	1306386	1306662	True	NM_014723,NM_001199784,NM_080489	chr20,chr20,chr20	+,-,-	SNPH,SDCBP2,SDCBP2	-59477,43,3267
chr12:1728645-1729960	chr12	+	1728649	1729703	True	NM_032642,NM_030775,NM_152441	chr12,chr12,chr12	+,+,-	WNT5B,WNT5B,FBXL14	8708,-2488,-25318
chr7:5922285-5923417	chr7	+	5922401	5923448	True	NM_001097622,NM_001099697	chr7,chr7	+,-	OCM,RSPH10B2	-2023,86916
chr8:68656265-68656862	chr8	+	68656421	68656875	True	NM_020361,NM_025170	chr8,chr8	-,+	CPA6,PREX2	1795,207727
chr1:212458230-212458707	chr1	+	212458300	212458594	True	NM_006243,NM_001198862	chr1,chr1	+,-	PPP2R5A,TMEM206	284,129699
chr2:211038343-211040316	chr2	+	211038363	211040049	True	NM_152519,NM_199229	chr2,chr2	-,+	C2orf67,RPE	-2312,-171040
chr6:142920669-142921916	chr6	+	142921340	142921966	True	NR_027311,NM_198569	chr6,chr6	-,+	LOC153910,GPR126	37059,-298335
chr11:7870556-7872378	chr11	+	7870635	7871961	True	NR_027711,NM_153445	chr11,chr11	+,-	OR5E1P,OR5P3	-88,-23116
chr17:20947063-20948397	chr17	+	20947070	20948417	True	NM_015276,NM_015510	chr17,chr17	-,+	USP22,DHRS7B	-718,81840
chr6:43325244-43326144	chr6	+	43325254	43325849	True	NM_014345,NM_153320	chr6,chr6	-,+	ZNF318,SLC22A7	11383,-59309
chr11:88932100-88933334	chr11	+	88932481	88933290	True	NM_000842,NM_000372	chr11,chr11	-,+	GRM5,TYR	-135665,-21508
chr6:134210305-134210542	chr6	+	134210404	134210588	True	NM_003206,NM_145176,NM_198392	chr6,chr6,chr6	+,-,+	TCF21,SLC2A12,TCF21	-195,163251,-196
chr14:105941720-105942034	chr14	+	105941731	105942027	True	NM_001312,NM_001519	chr14,chr14	+,-	CRIP2,BRF1	-651,-174402
chr1:27117326-27118857	chr1	+	27117401	27118603	True	NM_001202554,NM_018066,NM_017837	chr1,chr1,chr1	+,-,+	PIGV,GPN2,PIGV	-2773,98318,-2998
chr2:219262968-219263190	chr2	+	219262968	219263144	True	NM_022152,NM_021198,NR_029500,NM_182642	chr2,chr2,chr2,chr2	-,+,+,+	TMBIM1,CTDSP1,MIR26B,CTDSP1	-105688,1333,4224,1669
chr1:1217453-1217662	chr1	+	1217534	1217678	True	NR_037668,NM_194458,NM_194315,NM_194457,NM_001130413,NM_058167	chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,-,+,-	SCNN1D,UBE2J2,UBE2J2,UBE2J2,SCNN1D,UBE2J2	-6947,-8300,-8300,-8300,-6947,-8300
chr22:25395007-25395638	chr22	+	25395011	25395536	True	NM_001001663,NM_001145206	chr22,chr22	-,+	TMEM211,KIAA1671	-59697,28404
chr3:52487103-52487818	chr3	+	52487258	52487796	True	NM_003280,NM_020163,NM_007184	chr3,chr3,chr3	-,-,+	TNNC1,SEMA3G,NISCH	311,-8215,1727
chr5:140581651-140582087	chr5	+	140581651	140581850	True	NM_018932,NM_031947,NM_018930,NM_018931	chr5,chr5,chr5,chr5	+,-,+,+	PCDHB12,SLC25A2,PCDHB10,PCDHB11	6440,101815,-9753,-2357
chr12:102415497-102416388	chr12	+	102415496	102416417	True	NM_017915,NM_016053	chr12,chr12	+,-	C12orf48,CCDC53	97538,39532
chr6:26032250-26032737	chr6	+	26032254	26032739	True	NM_003537,NM_003544,NM_003538,NM_003513	chr6,chr6,chr6,chr6	-,-,+,-	HIST1H3B,HIST1H4B,HIST1H4A,HIST1H2AB	34,-4774,-10398,1108
chr19:49539936-49540276	chr19	+	49539977	49540305	True	NR_004383,NM_033378,NM_033377,NR_024244,NM_033043	chr19,chr19,chr19,chr19,chr19	+,+,-,-,+	SNAR-G1,CGB2,CGB1,SNAR-G2,CGB5	23,-4898,-6,-4933,6796
chr3:184874676-184875062	chr3	+	184874748	184875088	True	NM_004721,NM_001025266	chr3,chr3	+,-	MAP3K13,C3orf70	205881,-3946
chrX:38077268-38078211	chrX	+	38077268	38078198	True	NM_006307,NM_000531,NM_001170752,NM_001170751,NM_001170750	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	SRPX,OTC,SRPX,SRPX,SRPX	2029,133537,2029,2029,2029
chr2:142890194-142891440	chr2	+	142890477	142891254	True	NM_018557,NM_001032998	chr2,chr2	-,+	LRP1B,KYNU	-1207,743940
chr2:241807641-241808400	chr2	+	241807716	241808300	True	NM_024861,NM_000030	chr2,chr2	-,+	C2orf54,AGXT	23202,13
chr17:38136749-38137041	chr17	+	38136751	38136932	True	NM_139280,NM_002809	chr17,chr17	-,+	ORMDL3,PSMD3	-52867,127
chr7:134256878-134257103	chr7	+	134256878	134257128	True	NM_001628,NM_001080538	chr7,chr7	-,+	AKR1B1,AKR1B15	-112990,-23080
chr11:67184415-67184756	chr11	+	67184422	67184728	True	NM_001166222,NM_020811,NM_206873	chr11,chr11,chr11	+,+,-	CARNS1,CARNS1,PPP1CA	-1324,-1324,-15046
chr19:49079499-49080663	chr19	+	49079520	49080257	True	NM_017708,NM_004605	chr19,chr19	-,+	FAM83E,SULT2B1	36494,-578
chr10:14884789-14885468	chr10	+	14884883	14885354	True	NM_001029954,NM_016299	chr10,chr10	-,+	CDNF,HSPA14	-4900,-4674
chr19:56189078-56189536	chr19	+	56189119	56189575	True	NM_001130072,NM_203374,NM_001130071,NM_013333	chr19,chr19,chr19,chr19	+,-,+,+	EPN1,ZNF784,EPN1,EPN1	-2610,-53178,-1180,-2610
chr12:7055584-7055909	chr12	+	7055691	7055923	True	NM_138425,NM_080548,NM_080549,NR_003010,NM_002831	chr12,chr12,chr12,chr12,chr12	+,+,+,-,+	C12orf57,PTPN6,PTPN6,SCARNA12,PTPN6	-2539,-2,4510,20896,4510
chr7:7750653-7750987	chr7	+	7750669	7751037	True	NR_034084,NM_002947	chr7,chr7	+,-	LOC729852,RPA3	-70378,7259
chr6:146134336-146135489	chr6	+	146134392	146135390	True	NM_032145,NM_000838	chr6,chr6	-,+	FBXO30,GRM1	581,213391
chr3:53382828-53383376	chr3	+	53383008	53383244	True	NM_018403,NM_000720	chr3,chr3	-,+	DCP1A,CACNA1D	-1354,145786
chr5:72683907-72685424	chr5	+	72684310	72685234	True	NM_004472,NM_001037637	chr5,chr5	-,+	FOXD1,BTF3	59169,109015
chr2:128420968-128421761	chr2	+	128421014	128421738	True	NM_005291,NM_017980	chr2,chr2	+,-	GPR17,LIMS2	-17628,479
chr17:7122594-7122947	chr17	+	7122646	7122883	True	NM_001365,NR_029896,NM_001033859,NM_000018,NM_001128827	chr17,chr17,chr17,chr17,chr17	-,-,+,+,-	DLG4,MIR324,ACADVL,ACADVL,DLG4	537,3866,269,269,-1718
chr1:54663771-54664096	chr1	+	54663771	54663987	True	NM_001031672,NM_016491	chr1,chr1	-,+	CYB5RL,MRPL37	1809,1852
chr5:173116564-173116774	chr5	+	173116602	173116820	True	NR_027109,NM_138369	chr5,chr5	+,-	LOC285593,BOD1	-109996,-72936
chr22:39548559-39548778	chr22	+	39548602	39548674	True	NM_181773,NM_175709	chr22,chr22	+,-	APOBEC3H,CBX7	-55424,-64
chr20:2083796-2084063	chr20	+	2083872	2084000	True	NM_080836,NM_024411	chr20,chr20	+,-	STK35,PDYN	-1395,-108941
chr8:30014251-30015187	chr8	+	30014464	30015016	True	NM_006571,NM_001100916	chr8,chr8	+,-	DCTN6,MBOAT4	-717,-12264
chr10:77160004-77160876	chr10	+	77160073	77160673	True	NM_032772,NR_024422,NR_024421	chr10,chr10,chr10	-,+,+	ZNF503,NCRNA00245,NCRNA00245	890,2840,612
chr15:24823620-24824023	chr15	+	24823703	24824039	True	NR_026646,NR_026647	chr15,chr15	+,-	PWRN1,PWRN2	-20450,-408650
chr19:19781488-19781837	chr19	+	19781570	19781646	True	NM_020410,NM_033204	chr19,chr19	-,+	ATP13A1,ZNF101	-7067,-1967
chr10:25296522-25298021	chr10	+	25296798	25297485	True	NM_024838,NM_145010	chr10,chr10	+,-	THNSL1,ENKUR	8022,7603
chr19:45971478-45971696	chr19	+	45971479	45971685	True	NM_001114171,NM_006732,NM_206901	chr19,chr19,chr19	+,+,-	FOSB,FOSB,RTN2	-277,-277,24839
chr14:39643864-39644343	chr14	+	39643987	39644389	True	NM_001079537,NM_177452,NM_002687	chr14,chr14,chr14	-,-,+	TRAPPC6B,TRAPPC6B,PNN	-4353,-4353,-3
chr1:54304059-54305129	chr1	+	54304275	54305145	True	NM_000792,NR_033142,NM_001168551,NM_018087	chr1,chr1,chr1,chr1	+,-,-,-	DIO1,TMEM48,TMEM48,TMEM48	54715,-50,-50,-50
chr1:9879145-9880297	chr1	+	9879195	9880300	True	NM_022787,NM_001009566,NM_014944	chr1,chr1,chr1	+,-,-	NMNAT1,CLSTN1,CLSTN1	123185,4300,4300
chr11:74659051-74659629	chr11	+	74659105	74659672	True	NM_182969,NM_014752	chr11,chr11	-,+	XRRA1,SPCS2	610,619
chr13:76045598-76046097	chr13	+	76045887	76045971	True	NM_014832,NM_006002	chr13,chr13	-,+	TBC1D4,UCHL3	10329,77955
chr4:54248975-54249548	chr4	+	54249009	54249514	True	NM_001134938,NM_001134937,NM_030917,NM_152540	chr4,chr4,chr4,chr4	+,+,+,-	FIP1L1,FIP1L1,FIP1L1,SCFD2	-5253,-5253,-5253,-16767
chr11:134146768-134146969	chr11	+	134146890	134147018	True	NM_001080407,NM_199298	chr11,chr11	+,-	GLB1L3,THYN1	-666,-23630
chr12:68041416-68041884	chr12	+	68041451	68041807	True	NM_003583,NM_000619,NM_006482	chr12,chr12,chr12	+,-,+	DYRK2,IFNG,DYRK2	704,511764,704
chr17:61521550-61522459	chr17	+	61521651	61522130	True	NM_001915,NM_001017916,NM_001017917,NM_000789	chr17,chr17,chr17,chr17	-,-,-,+	CYB561,CYB561,CYB561,ACE	1643,1466,-3444,32291
chr15:74218408-74218695	chr15	+	74218438	74218732	True	NM_004809,NM_005576	chr15,chr15	-,+	STOML1,LOXL1	65953,56
chr16:30903962-30904224	chr16	+	30904020	30904190	True	NM_001330,NM_004765,NR_031576,NM_001142544	chr16,chr16,chr16,chr16	+,-,+,+	CTF1,BCL7C,MIR762,CTF1	3737,1259,1033,3737
chr17:6661477-6662383	chr17	+	6661498	6662208	True	NM_199139,NM_177550,NM_017523	chr17,chr17,chr17	+,-,+	XAF1,SLC13A5,XAF1	-2393,-44758,-2393
chr8:97780165-97780704	chr8	+	97780214	97780733	True	NM_016134,NM_015942	chr8,chr8	+,-	PGCP,MTERFD1	-122766,-506418
chr11:76380622-76381349	chr11	+	76380673	76381379	True	NM_015516,NM_001128922,NM_005512	chr11,chr11,chr11	+,-,-	TSKU,LRRC32,LRRC32	112905,462,-7
chr12:56883275-56884704	chr12	+	56883289	56884647	True	NM_013267,NM_207344	chr12,chr12	-,+	GLS2,SPRYD4	-1108,-21045
chr3:39228191-39228425	chr3	+	39228246	39228472	True	NM_145755,NM_001198621,NM_194293	chr3,chr3,chr3	+,-,-	TTC21A,XIRP1,XIRP1	-79145,5663,5655
chr8:141466771-141467217	chr8	+	141466798	141467178	True	NM_001160372,NM_017444,NM_031466	chr8,chr8,chr8	-,+,-	TRAPPC9,CHRAC1,TRAPPC9	733,54222,1550
chr20:31069635-31070195	chr20	+	31069792	31070181	True	NM_080616,NR_034152	chr20,chr20	-,+	C20orf112,LOC149950	1162,105099
chr19:55889579-55890123	chr19	+	55889585	55890111	True	NM_139172,NM_001190764,NM_000991,NM_001136135,NM_001136134,NM_001136137,NM_001136136,NM_000641	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+,+,-	TMEM190,LOC388564,RPL28,RPL28,RPL28,RPL28,RPL28,IL11	-1432,5566,7188,7188,7188,7188,7188,-7771
chr12:57642833-57643892	chr12	+	57642835	57643874	True	NM_145064,NM_020142,NM_001166357	chr12,chr12,chr12	-,-,+	STAC3,NDUFA4L2,SHMT2	1152,-8360,-18747
chr1:46049355-46049589	chr1	+	46049433	46049557	True	NM_002482,NM_001195193,NM_001114938,NM_152298	chr1,chr1,chr1,chr1	+,+,-,+	NASP,NASP,CCDC17,NASP	102,102,40224,102
chr1:202782313-202783152	chr1	+	202782315	202782540	True	NM_006618,NR_002929	chr1,chr1	-,+	KDM5B,LOC148709	-4766,48341
chr7:150746897-150747200	chr7	+	150746920	150747240	True	NM_004769,NM_001164410,NM_020321,NM_020322,NM_001199692,NM_003040,NM_004935	chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,-,+,+,+,+,-	ACCN3,CDK5,ACCN3,ACCN3,SLC4A2,SLC4A2,CDK5	-1367,7862,-1367,-1367,8058,9416,7862
chr6:33357126-33357418	chr6_mcf_hap5	+	4830923	4831021	False	NM_001350,NM_001185181	chr6_mcf_hap5,chr6_mcf_hap5	-,+	DAXX,PFDN6	-66388,-99818
chr6:33357126-33357418	chr6	+	33357166	33357264	True	NM_001014433,NM_002263	chr6,chr6	-,+	CUTA,KIFC1	28851,2048
chr6:33357126-33357418	chr6_ssto_hap7	+	4837383	4837481	False	NM_001014433,NM_002263	chr6_ssto_hap7,chr6_ssto_hap7	-,+	CUTA,KIFC1	28880,2047
chr19:7660399-7660638	chr19	+	7660398	7660584	True	NM_020196,NM_020902,NM_001080429	chr19,chr19,chr19	-,+,+	XAB2,KIAA1543,KIAA1543	33905,203,203
chr20:61201227-61201874	chr20	+	61201450	61201870	True	NR_033263,NR_029676	chr20,chr20	-,+	C20orf200,MIR133A2	-52682,-39382
chr18:76738819-76739065	chr18	+	76738849	76739112	True	NM_001146343,NM_171999	chr18,chr18	-,+	PQLC1,SALL3	972591,1162
chr4:41998973-41999959	chr4	+	41999103	41999991	True	NM_006345,NM_001159547	chr4,chr4	+,-	SLC30A9,BEND4	-6631,154961
chr5:44388192-44388731	chr5	+	44388446	44388612	True	NM_004465,NM_016640	chr5,chr5	-,+	FGF10,MRPS30	222,420414
chr19:18313646-18313848	chr19	+	18313646	18313756	True	NM_002866,NM_032683	chr19,chr19	-,+	RAB3A,MPV17L2	1168,-9657
chr1:32535637-32536646	chr1	+	32535748	32536479	True	NM_018056,NM_080391	chr1,chr1	+,-	TMEM39B,PTP4A2	2023,-131760
chr14:65378695-65380180	chr14	+	65379179	65379859	True	NM_001202559,NM_001202558,NM_002083,NM_001204063,NM_001204064,NM_145165	chr14,chr14,chr14,chr14,chr14,chr14	+,+,-,+,+,+	CHURC1-FNTB,CHURC1-FNTB,GPX2,CHURC1,CHURC1,CHURC1	1219,1219,29722,1219,1219,1219
chr19:17390577-17391783	chr19	+	17390583	17391173	True	NM_152363,NM_031941	chr19,chr19	+,-	ANKLE1,USHBP1	1280,-15039
chr22:21904365-21904613	chr22	+	21904369	21904661	True	NM_001128635,NM_003347,NM_001128633	chr22,chr22,chr22	-,+,-	RIMBP3B,UBE2L3,RIMBP3C	762,17295,1139
chr22:21904365-21904613	chr22	+	20460405	20460697	False	NM_015672,NR_026919	chr22,chr22	-,+	RIMBP3,LOC150197	1139,-266601
chr22:21904365-21904613	chr22	-	21738751	21739043	False	NM_001128635,NR_003700,NM_001128633	chr22,chr22,chr22	+,-,+	RIMBP3B,PI4KAP2,RIMBP3C	-762,132787,-1139
chrX:48243393-48244383	chrX	+	48243522	48244360	True	NM_175729,NM_175711,NM_001040612,NM_005636,NM_001034832	chrX,chrX,chrX,chrX,chrX	+,-,+,+,+	SSX4,SSX3,SSX4B,SSX4,SSX4B	-605,-27380,-605,-605,-605
chrX:48243393-48244383	chrX	-	48269949	48270786	False	NM_175729,NM_001040612,NM_005636,NM_001034832	chrX,chrX,chrX,chrX	-,-,-,-	SSX4,SSX4B,SSX4,SSX4B	608,608,608,608
chr20:43160047-43160349	chr20	+	43160185	43160307	True	NM_198941,NM_007066,NM_006811,NM_181805,NM_181804	chr20,chr20,chr20,chr20,chr20	-,+,-,+,+	SERINC3,PKIG,SERINC3,PKIG,PKIG	-9459,128,-9459,128,128
chrX:70985227-70985805	chrX	+	70985481	70985797	True	NR_001568,NM_001145140,NM_001145139	chrX,chrX,chrX	-,+,+	BCYRN1,CXorf49,CXorf49B	-36519,-2392,-2392
chrX:70985227-70985805	chrX	-	70935477	70935793	False	NR_034005,NM_001145140,NM_001145139	chrX,chrX,chrX	+,-,-	FLJ46446,CXorf49,CXorf49B	-18482,2392,2392
chr13:28515029-28516051	chr13	+	28515444	28516091	True	NR_002162,NM_001265	chr13,chr13	+,-	ATP5EP2,CDX2	3251,27277
chr1:212208738-212209040	chr1	+	212208753	212208828	True	NM_001199809,NM_001199811,NM_001199812,NM_015434,NR_037667,NM_016448	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,+	INTS7,INTS7,INTS7,INTS7,INTS7,DTL	225,225,225,225,225,90
chr9:139746325-139746659	chr9	+	139746336	139746510	True	NM_003792,NM_014172,NM_206920,NM_001080482,NM_001135861	chr9,chr9,chr9,chr9,chr9	-,+,+,+,+	EDF1,PHPT1,MAMDC4,C9orf172,PHPT1	14278,-3131,308,-7520,-3131
chr6:133037166-133038234	chr6	+	133037170	133037989	True	NM_004666,NM_001016	chr6,chr6	-,+	VNN1,RPS12	-1976,97718
chr12:71008565-71009166	chr12	+	71008564	71009124	True	NM_002837,NM_014505	chr12,chr12	-,+	PTPRB,KCNMB4	-4940,-248560
chr19:44287407-44288162	chr19	+	44287418	44288126	True	NM_181845,NM_002250	chr19,chr19	+,-	ZNF283,KCNN4	43346,-2009
chr6:12719182-12720775	chr6	+	12719181	12720663	True	NM_001143964,NM_030948	chr6,chr6	-,+	TBC1D7,PHACTR1	608174,-1400
chr7:102309980-102311135	chr7	+	102310169	102310953	True	NM_032959,NM_001166339	chr7,chr7	-,+	POLR2J2,SPDYE2L	1279,-19449
chr7:102309980-102311135	chr7	+	44057324	44057374	False	NM_175064,NR_003655	chr7,chr7	+,-	SPDYE1,POLR2J4	-16886,1424
chr7:102309980-102311135	chr7	+	102117919	102117969	False	NM_006234,NM_152892	chr7,chr7	-,+	POLR2J,LRWD1	1462,-12580
chr7:102309980-102311135	chr7	+	102211575	102211873	False	NM_001166339,NM_001097615	chr7,chr7	+,-	SPDYE2L,POLR2J3	-19947,1245
chr11:125703469-125705214	chr11	+	125703663	125705099	True	NM_001144874,NM_212555	chr11,chr11	+,-	PATE4,PATE2	-511,-54949
chrX:153663655-153664094	chrX	+	153663665	153663945	True	NM_001009934,NM_004699,NM_001493,NM_001183	chrX,chrX,chrX,chrX	-,+,+,+	DNASE1L1,FAM50A,GDI1,ATP6AP1	-23238,8539,1313,-6738
chr19:2390886-2392565	chr19	+	2391300	2392280	True	NM_182973,NM_012458	chr19,chr19	+,-	TMPRSS9,TIMM13	-1568,35646
chr20:62688389-62688715	chr20	+	62688622	62688698	True	NM_198723,NM_018419,NM_003195	chr20,chr20,chr20	+,-,+	TCEA2,SOX18,TCEA2	-234,-7643,5311
chr1:202175719-202176338	chr1	+	202175929	202176386	True	NM_021636,NR_037664,NM_001017404	chr1,chr1,chr1	+,-,+	LGR6,PTPN7,LGR6	-3078,-45213,6896
chr2:238601671-238602200	chr2	+	238601811	238602190	True	NM_001137551,NM_001137552,NM_001137553,NM_004735,NR_033308	chr2,chr2,chr2,chr2,chr2	+,+,+,+,-	LRRFIP1,LRRFIP1,LRRFIP1,LRRFIP1,RAB17	-1065,-1065,-1065,-1065,-102042
chr8:6264957-6265479	chr8	+	6264961	6265528	True	NM_001172575,NM_001172574,NM_001118887,NM_024596	chr8,chr8,chr8,chr8	+,+,-,+	MCPH1,MCPH1,ANGPT2,MCPH1	-899,-899,155306,-899
chr17:4483990-4485164	chr17	+	4484442	4484930	True	NM_198501,NM_001114974,NM_153338	chr17,chr17,chr17	+,+,-	SMTNL2,SMTNL2,GGT6	2345,2903,-20566
chr18:76837991-76838833	chr18	+	76837993	76838521	True	NM_198531,NM_001146343	chr18,chr18	+,-	ATP9B,PQLC1	-8647,873182
chr5:180257393-180258007	chr5	+	180257440	180257980	True	NR_027183,NM_001114617	chr5,chr5	+,-	LOC729678,MGAT1	-532,-20303
chr19:675104-675793	chr19	+	675157	675557	True	NM_005860,NM_194460	chr19,chr19	+,-	FSTL3,RNF126	831,-11924
chr9:32635090-32635566	chr9	+	32635241	32635595	True	NM_153809,NR_033992	chr9,chr9	-,+	TAF1L,LOC100129250	122,-83528
chr1:97190114-97190946	chr1	+	97190152	97190862	True	NM_000110,NM_021190	chr1,chr1	-,+	DPYD,PTBP2	1195809,-3028
chrX:101472922-101473546	chrX	+	101472940	101473436	True	NM_001012978,NM_017809,NM_001099686	chrX,chrX,chrX	-,+,+	BEX5,NXF2,NXF2B	-61954,-2724,-2724
chrX:101472922-101473546	chrX	-	101723575	101724071	False	NM_017809,NR_002216,NM_001099686	chrX,chrX,chrX	-,+,-	NXF2,NXF4,NXF2B	2724,80821,2724
chrX:153031374-153031760	chrX	+	153031449	153031793	True	NM_001163257,NM_004135,NM_005393	chrX,chrX,chrX	+,-,+	PLXNB3,IDH3G,PLXNB3	-1849,28224,-1849
chr1:32802967-32804103	chr1	+	32803016	32804138	True	NM_023009,NM_052841	chr1,chr1	-,+	MARCKSL1,TSSK3	-1182,23723
chr8:82017363-82018323	chr8	+	82017490	82018239	True	NM_001444,NM_018440	chr8,chr8	+,-	FABP5,PAG1	174478,6114
chr7:89749117-89749724	chr7	+	89749157	89749333	True	NR_003551,NM_152706	chr7,chr7	+,-	DPY19L2P4,C7orf62	-494,-1324126
chr9:74764381-74764677	chr9	+	74764402	74764678	True	NM_004293,NM_001128618	chr9,chr9	+,-	GDA,C9orf57	-160,-88881
chrX:105065958-105066209	chrX	+	105065978	105066164	True	NM_198465,NM_000354	chrX,chrX	+,-	NRK,SERPINA7	371,216604
chr14:23905694-23906535	chr14	+	23905779	23906530	True	NM_000257,NM_001042635	chr14,chr14	-,+	MYH7,NGDN	-909,32367
chr2:174220303-174220631	chr2	+	174220331	174220509	True	NM_031942,NM_145810,NR_033882	chr2,chr2,chr2	+,+,-	CDCA7,CDCA7,LOC339751	-821,-821,-73567
chr19:9240251-9240584	chr19	+	9240453	9240591	True	NM_001190791,NM_001001958	chr19,chr19	+,-	ZNF317,OR7G3	10464,-2827
chr6:144639966-144641148	chr6	+	144640340	144640641	True	NM_007124,NM_031287	chr6,chr6	+,-	UTRN,SF3B5	-27518,-223586
chr11:64731232-64731640	chr11	+	64731350	64731438	True	NM_001037225,NM_006244	chr11,chr11	-,+	C11orf85,PPP2R5B	-3741,-39271
chr10:105881699-105881999	chr10	+	105881702	105881874	True	NM_000494,NM_145247,NM_001002759	chr10,chr10,chr10	-,+,+	COL17A1,MEIR5,MEIR5	-36064,-27,54
chr15:37394060-37394511	chr15	+	37394201	37394539	True	NM_170674,NM_170675,NM_170676,NM_170677,NM_172315,NM_172316,NM_002399,NM_032499	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,-,-,-,-,-,+	MEIS2,MEIS2,MEIS2,MEIS2,MEIS2,MEIS2,MEIS2,C15orf41	-1497,-1497,-1497,-1497,-3698,-2604,-701,-461446
chr8:145731459-145731708	chr8	+	145731485	145731723	True	NM_032902,NM_005309,NM_004260,NM_138431	chr8,chr8,chr8,chr8	+,+,-,+	PPP1R16A,GPT,RECQL4,MFSD3	-9427,-2071,11537,2828
chr5:54467063-54467698	chr5	+	54467222	54467292	True	NR_031572,NR_030387,NR_029960,NM_001170402,NM_152623,NM_001145734,NM_001008397	chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,-,-,+	MIR449C,MIR449B,MIR449A,CDC20B,CDC20B,CDC20B,GPX8	939,-652,-772,1763,1763,1763,-11298
chr17:4842062-4842458	chr17	+	4842061	4842435	True	NM_001165418,NM_005022,NM_001165417,NM_003562,NM_000173,NM_015528	chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,+,+	SLC25A11,PFN1,SLC25A11,SLC25A11,GP1BA,RNF167	1077,9440,1077,1077,-6520,1194
chr19:39988653-39988912	chr19	+	39988813	39988961	True	NM_016941,NM_152361,NM_203486	chr19,chr19,chr19	+,-,+	DLL3,EID2B,DLL3	595,34583,595
chr12:48579224-48580171	chr12	+	48579303	48580129	True	NM_001013635,NM_001004134	chr12,chr12	+,-	C12orf68,OR10AD1	-1988,16996
chr11:17189982-17190717	chr11	+	17190217	17190669	True	NM_002645,NM_005013	chr11,chr11	-,+	PIK3C2A,NUCB2	735,107616
chr2:242800792-242801373	chr2	+	242800908	242801350	True	NM_173821	chr2	+	C2orf85	10535
chr12:62654930-62655972	chr12	+	62654973	62655612	True	NM_006313,NM_178539	chr12,chr12	+,-	USP15,FAM19A2	-845,-68422
chrX:74145065-74145439	chrX	+	74145152	74145230	True	NM_145052,NM_001008537	chrX,chrX	+,-	UPRT,KIAA2022	348663,107
chr19:36268454-36269377	chr19	+	36268457	36269417	True	NM_052948,NM_144617,NM_001172630	chr19,chr19,chr19	+,-,+	ARHGAP33,HSPB6,ARHGAP33	-2091,-20527,-2091
chr20:62186580-62187009	chr20	+	62186717	62187057	True	NM_024059,NM_080823	chr20,chr20	+,-	C20orf195,SRMS	-2395,-7860
chr19:35841950-35842382	chr19	+	35842113	35842373	True	NM_005303,NM_152481,NM_005304	chr19,chr19,chr19	+,-,+	FFAR1,FAM187B,FFAR3	71,-122485,7114
chr11:78129528-78131227	chr11	+	78129768	78130907	True	NM_080491,NM_020798	chr11,chr11	-,+	GAB2,USP35	-900,-229961
chr12:85524707-85526462	chr12	+	85525118	85526219	True	NM_001100917,NM_001079910	chr12,chr12	-,+	TSPAN19,LRRIQ1	-95063,-95070
chr10:5405357-5405934	chr10	+	5405397	5405765	True	NM_001171864,NM_053049	chr10,chr10	-,+	TUBAL3,UCN3	41078,1210
chr19:53193300-53193810	chr19	+	53193350	53193752	True	NR_003936,NR_023311	chr19,chr19	-,+	ZNF83,ZNF137P	184,-93464
chr7:138719716-138720006	chr7	+	138719925	138720045	True	NM_001144920,NM_080660	chr7,chr7	+,-	TTC26,ZC3HAV1L	98444,780
chr1:53310432-53310674	chr1	+	53310447	53310560	True	NM_001198961,NM_001004339	chr1,chr1	-,+	ECHDC2,ZYG11A	76941,-2318
chr15:72946820-72947260	chr15	+	72946857	72947176	True	NR_002780,NM_018652	chr15,chr15	-,+	HIGD2B,GOLGA6B	31371,130
chr15:72946820-72947260	chr15	-	74374752	74375071	False	NM_001130136,NM_001038640	chr15,chr15	+,-	ISLR2,GOLGA6A	46643,-130
chr15:72946820-72947260	chr15	+	75550718	75551037	False	NR_030360,NM_001164404	chr15,chr15	-,+	MIR631,GOLGA6C	95046,130
chr15:72946820-72947260	chr15	+	75574995	75575314	False	NR_030360,NM_001145224	chr15,chr15	-,+	MIR631,GOLGA6D	70769,-125
chr1:77165296-77165575	chr1	+	77165397	77165623	True	NM_005482,NM_030965	chr1,chr1	-,+	PIGK,ST6GALNAC5	519559,167562
chr2:27717089-27717328	chr2	+	27717094	27717374	True	NM_022823,NM_015662,NM_001486	chr2,chr2,chr2	-,-,+	FNDC4,IFT172,GCKR	802,-4523,2331
chr6:392626-392923	chr6	+	392701	392871	True	NM_148959,NM_002460,NM_001195286,NR_036585	chr6,chr6,chr6,chr6	-,+,+,+	HUS1B,IRF4,IRF4,IRF4	264143,-1013,-1013,-1013
chr11:63707386-63707681	chr11	+	63707398	63707513	True	NM_024771,NM_173587	chr11,chr11	+,-	NAA40,RCOR2	-1015,-23082
chr8:41436127-41437076	chr8	+	41436355	41437014	True	NM_152568,NM_178819	chr8,chr8	-,+	NKX6-3,AGPAT6	67915,-699
chr11:3253530-3253776	chr11	+	3253561	3253825	True	NR_027138,NM_001039165	chr11,chr11	+,-	C11orf36,MRGPRE	-14050,-31
chr7:98251316-98251846	chr7	+	98251494	98251840	True	NM_002523,NM_001134450	chr7,chr7	+,-	NPTX2,TMEM130	-4948,215883
chrY:24442050-24443528	chrY	+	24442070	24443565	True	NR_001541,NR_002193	chrY,chrY	-,+	TTTY5,RBMY2FP	1508,11440
chr5:25909684-25909966	chr5	+	25909688	25909984	True	NR_037896,NM_020227	chr5,chr5	-,+	LOC340107,PRDM9	-1068996,-2402015
chr1:186648972-186649322	chr1	+	186649074	186649296	True	NM_024420,NM_000963	chr1,chr1	+,-	PLA2G4A,PTGS2	148735,313
chr20:42937756-42938178	chr20	+	42938114	42938181	True	NM_178491,NM_001080472	chr20,chr20	+,-	R3HDML,FITM2	27444,1759
chr7:65122918-65123248	chr7	+	65123025	65123125	True	NM_000181,NR_027392	chr7,chr7	-,+	GUSB,INTS4L2	324228,-10305
chr7:65122918-65123248	chr7	+	64611804	64611904	False	NR_027393,NM_001007253	chr7,chr7	+,-	INTS4L1,ERV3	-10258,-144680
chr7:65122918-65123248	chr7	-	65009355	65009455	False	NM_000181,NR_027392	chr7,chr7	-,+	GUSB,INTS4L2	437902,103321
chr7:65122918-65123248	chr11	-	77668604	77668704	False	NM_003251,NM_033547	chr11,chr11	+,-	THRSP,INTS4	106202,37069
chr6:165515721-165517367	chr6	+	165515823	165517125	True	NM_144980,NR_027284	chr6,chr6	-,+	C6orf118,LOC441177	206048,883913
chr1:27220102-27220842	chr1	+	27220562	27220886	True	NM_018066,NM_022078,NM_006600	chr1,chr1,chr1	-,-,+	GPN2,GPATCH3,NUDC	-3693,6126,27337
chr9:79376475-79377261	chr9	+	79376552	79377308	True	NR_015342,NM_015225	chr9,chr9	+,-	PCA3,PRUNE2	2045,143746
chr7:133820106-133820567	chr7	+	133820116	133820448	True	NM_032826,NM_144648	chr7,chr7	-,+	SLC35B4,LRGUK	181429,-8066
chr12:57029115-57029611	chr12	+	57029280	57029628	True	NR_003046,NM_002898,NM_013449,NR_002737	chr12,chr12,chr12,chr12	-,+,-,-	SNORD59B,RBMS2,BAZ2A,SNORD59A	7960,-113722,585,9307
chr19:16045689-16046238	chr19	+	16045823	16046229	True	NM_001004465,NM_021187,NM_001128932	chr19,chr19,chr19	+,-,-	OR10H4,CYP4F11,CYP4F11	13588,-147,-147
chr21:26965068-26966721	chr21	+	26965126	26966411	True	NR_024092,NR_030784	chr21,chr21	-,+	C21orf71,MIR155	-9590,-18885
chr7:150434244-150435181	chr7	+	150434320	150435105	True	NM_001101311,NM_018384	chr7,chr7	-,+	TMEM176B,GIMAP5	62566,58
chr2:239008207-239008527	chr2	+	239008271	239008332	True	NM_194312,NM_030768	chr2,chr2	+,-	ESPNL,ILKAP	618,104043
chr16:46782776-46783398	chr16	+	46782779	46783407	True	NM_182493,NR_037620	chr16,chr16	-,+	MYLK3,ORC6	-558,-59272
chr8:144514546-144514746	chr8	+	144514549	144514701	True	NM_201589,NM_052924	chr8,chr8	-,+	MAFA,RHPN1	-1947,-63575
chrX:67866245-67866957	chrX	+	67866277	67866985	True	NM_014725,NM_002547,NM_001142503	chrX,chrX,chrX	+,-,+	STARD8,OPHN1,STARD8	525,-212978,525
chrX:23350873-23351431	chrX	+	23350892	23351407	True	NM_173495,NM_001033583	chrX,chrX	+,-	PTCHD1,ACOT9	1577,410050
chr5:10617090-10617842	chr5	+	10617145	10617615	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-52762,143822
chr1:13741958-13742819	chr1	+	13742388	13742824	True	NM_001100114,NM_001099852,NM_001099850	chr1,chr1,chr1	+,+,-	PRAMEF21,PRAMEF20,PRAMEF18	-23,-5533,-43983
chr1:13741958-13742819	chr1	+	13521549	13521985	False	NM_001100114,NM_001099852,NM_001099850	chr1,chr1,chr1	+,+,-	PRAMEF21,PRAMEF20,PRAMEF18	-23,-5535,-43980
chr2:233243845-233244524	chr2	+	233243995	233244573	True	NR_028501,NM_001632	chr2,chr2	-,+	ECEL1P2,ALPP	7231,-698
chr16:55910377-55910986	chr16	+	55910461	55910967	True	NM_145024,NR_003276,NM_001143685	chr16,chr16,chr16	-,+,-	CES5A,CES1P1,CES5A	-1179,-116001,-1179
chr6:15058629-15058955	chr6	+	15058640	15058915	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	187611,604433
chr17:66570508-66572002	chr17	+	66570525	66572023	True	NR_027751,NM_212472	chr17,chr17	-,+	FAM20A,PRKAR1A	-15957,-62034
chr19:6464352-6464564	chr19	+	6464449	6464509	True	NM_139161,NM_174881,NM_024103	chr19,chr19,chr19	+,+,-	CRB3,CRB3,SLC25A23	-240,-240,-4668
chr17:39844237-39844856	chr17	+	39844238	39844871	True	NM_005801,NM_001079870	chr17,chr17	+,-	EIF1,HAP1	255,46077
chr17:33415513-33415820	chr17	+	33415533	33415739	True	NM_017559,NR_037713	chr17,chr17	+,-	FNDC8,RFFL	32891,659
chr6:157804755-157805505	chr6	+	157804767	157805522	True	NM_018452,NM_153746,NM_024630	chr6,chr6,chr6	-,+,+	C6orf35,ZDHHC14,ZDHHC14	-59514,-2261,-2261
chr1:27700890-27701631	chr1	+	27701021	27701521	True	NM_003665,NM_207397,NM_005281,NM_004672,NM_173452	chr1,chr1,chr1,chr1,chr1	-,-,+,-,-	FCN3,CD164L2,GPR3,MAP3K6,FCN3	-156,8334,17630,-7684,-156
chr4:48128676-48129793	chr4	+	48128829	48129823	True	NM_003328,NM_207330	chr4,chr4	-,+	TXK,NIPAL1	6500,-110089
chr1:148003456-148003838	chr1	+	148003625	148003702	True	NM_001170755,NM_015383	chr1,chr1	+,-	NBPF15,NBPF14	554485,22198
chr17:61817590-61818430	chr17	+	61817990	61818455	True	NM_001003788,NM_153335,NM_007372,NM_001165969,NM_001165970,NM_001003787,NM_001003786	chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,-,-,-,-	STRADA,STRADA,DDX42,STRADA,STRADA,STRADA,STRADA	926,926,33111,926,926,926,926
chr20:34702824-34704516	chr20	+	34702843	34704359	True	NM_177996,NR_027451	chr20,chr20	+,-	EPB41L1,LOC647979	-2546,-63961
chr22:41139582-41140696	chr22	+	41139766	41139841	True	NM_006358,NM_005297	chr22,chr22	-,+	SLC25A17,MCHR1	75606,-64639
chr20:56196779-56197278	chr20	+	56196925	56197327	True	NM_030776,NM_001160417,NM_001160419,NM_001160418,NM_002591	chr20,chr20,chr20,chr20,chr20	-,-,-,-,+	ZBP1,ZBP1,ZBP1,ZBP1,PCK1	-1293,-1293,-1293,-1293,-60839
chr20:2515860-2517045	chr20	+	2515931	2517082	True	NM_024325,NM_080751	chr20,chr20	-,+	ZNF343,TMC2	-26153,170
chr2:148778047-148778307	chr2	+	148778075	148778315	True	NM_001190881,NM_001190882,NM_001190879,NM_018328,NM_181741,NM_181742,NM_002552	chr2,chr2,chr2,chr2,chr2,chr2,chr2	-,-,-,+,-,-,-	ORC4,ORC4,ORC4,MBD5,ORC4,ORC4,ORC4	65,41,51,264,198,908,64
chr20:16554883-16555473	chr20	+	16555025	16555403	True	NM_001199865,NM_001199866,NM_024704,NM_003092	chr20,chr20,chr20,chr20	-,-,-,+	KIF16B,KIF16B,KIF16B,SNRPB2	-946,-946,-946,155205
chr17:5032327-5033375	chr17	+	5032337	5033169	True	NM_014519,NM_004505	chr17,chr17	-,+	ZNF232,USP6	-5940,-701
chr2:48126335-48128134	chr2	+	48126587	48127631	True	NM_000179,NM_001190274	chr2,chr2	+,-	MSH6,FBXO11	-116425,5351
chr1:114295113-114296499	chr1	+	114295344	114296033	True	NR_037864,NM_006608	chr1,chr1	+,-	LOC100287722,PHTF1	103223,5807
chr12:49075824-49076056	chr12	+	49075852	49076102	True	NR_029448,NM_017822	chr12,chr12	+,-	LOC255411,C12orf41	45115,-17
chr6:46027447-46029017	chr6	+	46027451	46028766	True	NM_001114086,NM_014936	chr6,chr6	-,+	CLIC5,ENPP4	19376,68934
chr7:150719655-150720296	chr7	+	150720002	150720284	True	NM_173681,NM_007188	chr7,chr7	-,+	ATG9B,ABCB8	1360,5225
chr12:87176117-87176713	chr12	+	87176457	87176639	True	NM_006183,NM_013244	chr12,chr12	+,-	NTS,MGAT4C	-908444,56092
chr1:174847656-174848664	chr1	+	174847732	174847952	True	NM_001035230,NM_022100	chr1,chr1	+,-	RABGAP1L,MRPS14	-3107,144695
chr19:48113762-48115079	chr19	+	48113967	48115061	True	NM_015711,NM_001101419	chr19,chr19	+,-	GLTSCR1,ZNF541	-2566,-54854
chr16:15027013-15027331	chr16	+	15027017	15027077	True	NR_023387,NM_006985	chr16,chr16	-,+	ABCC6P2,NPIP	-108458,4222
chr12:7350919-7351152	chr12	+	7350918	7351178	True	NM_000319,NM_031491,NM_001131026,NM_001131024,NM_001131025,NM_001131023	chr12,chr12,chr12,chr12,chr12,chr12	+,-,+,+,+,+	PEX5,RBP5,PEX5,PEX5,PEX5,PEX5	-8019,-69452,-9218,-8695,-8695,-8695
chr7:31630969-31632392	chr7	+	31630989	31632378	True	NM_194300,NM_022728	chr7,chr7	+,-	CCDC129,NEUROD6	-74069,-250451
chr12:39837580-39838687	chr12	+	39837646	39838416	True	NM_001173464,NM_001173465,NM_001031748,NM_017641,NM_001173463	chr12,chr12,chr12,chr12,chr12	-,-,+,-,-	KIF21A,KIF21A,C12orf40,KIF21A,KIF21A	-454,-454,181555,-454,-454
chr6:36307148-36308387	chr6	+	36307180	36308433	True	NM_001010903,NM_001145717	chr6,chr6	-,+	C6orf222,PNPLA1	-2518,-68994
chr1:161275246-161275551	chr1	+	161275326	161275598	True	NM_003001,NM_000530,NM_001035511,NM_001035513,NM_001035512	chr1,chr1,chr1,chr1,chr1	+,-,+,+,+	SDHC,MPZ,SDHC,SDHC,SDHC	8567,4214,8567,8567,8567
chr4:157864321-157864634	chr4	+	157864324	157864681	True	NM_000824,NM_016205	chr4,chr4	+,-	GLRB,PDGFC	132595,27922
chr7:106509628-106511072	chr7	+	106509650	106511121	True	NM_175884,NM_002649	chr7,chr7	-,+	FLJ36031,PIK3CG	-208016,-3777
chr8:145688217-145688483	chr8	+	145688457	145688523	True	NM_145754,NM_138496,NM_032687,NM_001129888	chr8,chr8,chr8,chr8	+,-,-,-	KIFC2,CYHR1,CYHR1,CYHR1	3214,1945,2376,2558
chr1:68681624-68683328	chr1	+	68681920	68683202	True	NM_001002292,NM_001924	chr1,chr1	-,+	WLS,GADD45A	15078,-531114
chr11:71935279-71935658	chr11	+	71935389	71935537	True	NM_001113534,NM_005169,NM_001567,NM_000803,NM_001113535,NM_001113536	chr11,chr11,chr11,chr11,chr11,chr11	+,-,+,+,+,+	FOLR2,PHOX2A,INPPL1,FOLR2,FOLR2,FOLR2	-7621,19733,344,-7621,-7621,-7621
chr1:116930377-116932302	chr1	+	116930524	116932319	True	NM_001160234,NR_024126	chr1,chr1	+,-	ATP1A1,ATP1A1OS	-4583,28912
chr17:32907479-32907737	chr17	+	32907557	32907731	True	NM_207454,NM_207313	chr17,chr17	-,+	C17orf102,TMEM132E	-1169,36
chr2:215675010-215676660	chr2	+	215675125	215676224	True	NM_000465,NM_001080500	chr2,chr2	-,+	BARD1,VWC2L	-697,-398716
chr7:86273264-86273934	chr7	+	86273358	86273788	True	NM_152748,NM_000840	chr7,chr7	-,+	KIAA1324L,GRM3	321553,-179
chr9:99654808-99656002	chr9	+	99654807	99655443	True	NR_028350,NM_001001662	chr9,chr9	+,-	LOC441454,ZNF782	15913,-38418
chr9:135852935-135853421	chr9	+	135852947	135853405	True	NM_001135031,NM_001162427,NM_004188	chr9,chr9,chr9	+,-,+	GFI1B,TSC1,GFI1B	692,-32927,692
chrX:110649542-110650566	chrX	+	110649541	110650582	True	NM_000555,NR_033974,NM_001195553,NM_178151,NM_178153,NM_178152	chrX,chrX,chrX,chrX,chrX,chrX	-,+,-,-,-,-	DCX,DKFZp686D0853,DCX,DCX,DCX,DCX	3842,104307,4928,4887,4928,4928
chr19:49588409-49588612	chr19	+	49588432	49588658	True	NM_031886,NM_003089	chr19,chr19	-,+	KCNA7,SNRNP70	-12234,-18
chr14:24911887-24912116	chr14	+	24911960	24912132	True	NM_015299,NM_020195	chr14,chr14	+,-	KHNYN,SDR39U1	-12870,3
chr11:3824650-3826225	chr11	+	3824947	3825851	True	NR_027018,NM_005387,NM_139131,NM_139132,NM_014489,NR_027016,NR_027017,NR_027014,NR_027015,NM_001145438,NM_016320	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,-,-,-,+,+,+,+,+,+,-	PGAP2,NUP98,NUP98,NUP98,PGAP2,PGAP2,PGAP2,PGAP2,PGAP2,PGAP2,NUP98	3388,-5925,-5925,-5925,3914,3914,-5815,-6051,-5873,-5956,-5925
chr17:41994382-41994618	chr17	+	41994490	41994594	True	NR_026770,NM_005374	chr17,chr17	+,-	C17orf88,MPP2	3,-9377
chr11:105480922-105481125	chr11	+	105480941	105481147	True	NM_032424,NM_001077243,NM_001112812,NM_001077244,NM_000829	chr11,chr11,chr11,chr11,chr11	-,+,+,+,+	KIAA1826,GRIA4,GRIA4,GRIA4,GRIA4	411857,-192,263,-192,-192
chr4:103871040-103871709	chr4	+	103871307	103871758	True	NM_001008388,NM_001100874	chr4,chr4	+,-	CISD2,NHEDC1	-81231,69189
chr20:25998880-25999601	chr20	+	25999100	25999648	True	NR_004846,NR_003678	chr20,chr20	+,-	LOC100134868,C20orf191	-8717,95079
chr20:25998880-25999601	chr20	-	25817531	25818079	False	NR_004846,NR_026714	chr20,chr20	+,-	LOC100134868,FAM182B	172355,-35604
chr19:56653181-56653985	chr19	+	56653194	56654000	True	NM_001002836,NM_018337	chr19,chr19	-,+	ZNF787,ZNF444	-20545,-689
chr9:139637618-139637825	chr9	+	139637642	139637820	True	NM_198946,NR_033913,NM_001001712	chr9,chr9,chr9	-,+,-	LCN6,LOC100128593,LCN10	5210,2792,-231
chrY:9573038-9573612	chrY	+	9573037	9573541	True	NR_003590,NR_003588,NR_001536	chrY,chrY,chrY	+,-,+	TTTY2B,TTTY21B,TTTY2	353,-14132,353
chrY:9573038-9573612	chrY	-	6296838	6297342	False	NR_001535,NR_003590,NR_001536	chrY,chrY,chrY	+,-,-	TTTY21,TTTY2B,TTTY2	14132,-353,-353
chr6:10835651-10836301	chr6	+	10835976	10836346	True	NM_001040274,NM_005906	chr6,chr6	+,-	SYCP2L,MAK	50717,-4866
chr11:9598065-9599268	chr11	+	9598065	9599309	True	NR_036539,NM_003390,NM_001143976	chr11,chr11,chr11	-,+,+	LOC644656,WEE1,WEE1	-115820,-2891,-1885
chrX:50555038-50556275	chrX	+	50555105	50555953	True	NM_020717,NR_027121,NR_003933	chrX,chrX,chrX	-,-,+	SHROOM4,SHROOM4,LOC347376	1141,1141,92478
chr14:37635802-37636288	chr14	+	37635871	37636311	True	NM_001171170,NR_033240,NM_030631	chr14,chr14,chr14	-,+,-	SLC25A21,LOC100129794,SLC25A21	5604,4919,5604
chr16:29819551-29820079	chr16	+	29819561	29820027	True	NM_001042539,NM_145239,NM_002383,NM_006319,NM_024516	chr16,chr16,chr16,chr16,chr16	+,+,+,-,+	MAZ,PRRT2,MAZ,CDIPT,C16orf53	-1757,3381,-1757,54601,7500
chr6:117000946-117002629	chr6	+	117001137	117002517	True	NM_145062,NM_002269	chr6,chr6	-,+	ZUFSP,KPNA5	-11164,-151
chr13:31194991-31195622	chr13	+	31194993	31195351	True	NM_005800,NM_002128	chr13,chr13	+,-	USPL1,HMGB1	-3214,-154912
chr9:124260496-124260956	chr9	+	124260519	124260832	True	NR_003191,NM_032552	chr9,chr9	-,+	GGTA1,DAB2IP	1531,68566
chr4:6571087-6572283	chr4	+	6572005	6572305	True	NM_020416,NM_015274	chr4,chr4	-,+	PPP2R2C,MAN2B2	-97679,4596
chr7:27186388-27186962	chr7	+	27186533	27187007	True	NR_002795,NM_024014,NM_006896,NM_019102	chr7,chr7,chr7,chr7	+,-,-,-	HOXA11-AS1,HOXA6,HOXA7,HOXA5	38019,411,9339,-3246
chr8:136244954-136245566	chr8	+	136244955	136245231	True	NR_026706,NR_029599	chr8,chr8	+,-	LOC286094,MIR30D	1142,-427767
chr17:27072592-27073669	chr17	+	27072888	27073628	True	NM_004295,NM_001160407	chr17,chr17	+,-	TRAF4,TLCD1	-1916,-18939
chr20:42086029-42086494	chr20	+	42086033	42086421	True	NR_034009,NM_133170,NM_006275	chr20,chr20,chr20	+,-,+	SRSF6,PTPRT,SRSF6	82,-267476,82
chr17:18325727-18325971	chr17	+	18325756	18326012	True	NM_148918,NR_001443	chr17,chr17	-,+	SHMT1,LOC339240	-58900,-312
chr17:18325727-18325971	chr17	-	16753349	16753605	False	NR_026810,NR_029392	chr17,chr17	+,-	FAM106C,KRT16P2	-61343,-17202
chr2:128854269-128856226	chr2	+	128854455	128856024	True	NM_024545,NM_020120,NR_027671	chr2,chr2,chr2	-,+,+	SAP130,UGGT1,UGGT1	-69586,-5761,-5733
chr17:43027072-43027613	chr17	+	43027080	43027428	True	NM_001080443,NM_213607	chr17,chr17	-,+	KIF18B,CCDC103	-1998,-49985
chr7:50344450-50344869	chr7	+	50344494	50344857	True	NM_001042762,NM_006060	chr7,chr7	-,+	FIGNL1,IKZF1	173285,-174
chr11:810715-810920	chr11	+	810804	810887	True	NM_001004,NM_145887,NR_002585,NM_145886,NM_020376	chr11,chr11,chr11,chr11,chr11	+,-,+,-,+	RPLP2,LRDD,SNORA52,LRDD,PNPLA2	-922,-5554,793,-5554,8013
chr7:29188899-29190118	chr7	+	29189161	29190145	True	NM_031311,NM_004067,NM_019029	chr7,chr7,chr7	-,+,-	CPVL,CHN2,CPVL	-3008,43975,-3008
chr1:150849107-150849511	chr1	+	150849239	150849439	True	NM_001197325,NM_001145415,NM_001668,NM_178427	chr1,chr1,chr1,chr1	-,+,-,-	ARNT,SETDB1,ARNT,ARNT	5,49375,5,5
chr2:170371836-170373385	chr2	+	170371990	170373150	True	NM_006063,NM_024622	chr2,chr2	+,-	KBTBD10,FASTKD1	-5829,57337
chr1:40844277-40845309	chr1	+	40844279	40845137	True	NM_022733,NM_001198978,NM_001852	chr1,chr1,chr1	+,+,-	SMAP2,SMAP2,COL9A2	-4964,-4037,-61340
chr6:47456424-47457205	chr6	+	47456659	47456853	True	NM_014452,NM_012120	chr6,chr6	-,+	TNFRSF21,CD2AP	-178979,-11191
chr2:182521766-182522748	chr2	+	182521989	182522761	True	NM_001030311,NM_001030312,NM_001030313,NM_000885,NR_027689,NM_201548,NR_027690,NM_001160277	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	-,-,-,+,-,-,-,-	CERKL,CERKL,CERKL,ITGA4,CERKL,CERKL,CERKL,CERKL	-155,-155,-155,-200422,-155,-155,-155,-155
chr2:42724647-42725562	chr2	+	42724746	42725401	True	NM_020744,NM_172344,NM_133329	chr2,chr2,chr2	+,-,-	MTA3,KCNG3,KCNG3	70269,-3509,-3509
chr15:75495619-75496414	chr15	+	75495777	75496457	True	NM_015492,NR_030360	chr15,chr15	+,-	C15orf39,MIR631	-1607,149619
chr22:38713515-38714270	chr22	+	38713620	38714308	True	NM_152221,NM_001161573,NM_001894	chr22,chr22,chr22	-,+,-	CSNK1E,MAFF,CSNK1E	-207,-114644,-31
chr3:49851940-49852570	chr3	+	49852246	49852338	True	NM_003335,NM_203370	chr3,chr3	-,+	UBA7,C3orf54	-855,-11618
chr12:121404700-121404918	chr12	+	121404701	121404952	True	NR_024345,NM_000545	chr12,chr12	-,+	NCRNA00262,HNF1A	5196,11596
chr9:71320697-71320908	chr9	+	71320741	71320917	True	NM_003558,NM_153237	chr9,chr9	+,-	PIP5K1B,C9orf71	-176,-164958
chrX:11248609-11250460	chrX	+	11248636	11250014	True	NM_001142,NM_013423	chrX,chrX	+,-	AMELX,ARHGAP6	61518,34131
chr16:58283044-58283782	chr16	+	58283048	58283729	True	NM_014157,NM_001142302,NM_001080492	chr16,chr16,chr16	+,+,-	CCDC113,CCDC113,PRSS54	110,110,45273
chr8:59465904-59466112	chr8	+	59465932	59466012	True	NM_000780,NM_005625,NM_001007070,NM_001007067,NM_001007068,NM_001007069	chr8,chr8,chr8,chr8,chr8,chr8	-,+,+,+,+,+	CYP7A1,SDCBP,SDCBP,SDCBP,SDCBP,SDCBP	-53212,-255,-255,-255,-255,-255
chr12:25214222-25216118	chr12	+	25214595	25215819	True	NM_001101339,NM_006152,NM_001204126,NM_001204127	chr12,chr12,chr12,chr12	-,+,+,+	C12orf77,LRMP,LRMP,LRMP	-64222,-9476,-9476,-9476
chr14:101193536-101194229	chr14	+	101193605	101194255	True	NM_003836,NM_020836,NM_001134888	chr14,chr14,chr14	+,-,-	DLK1,BEGAIN,RTL1	-454,-157474,156979
chr1:147484607-147485561	chr1	+	147484818	147485458	True	NR_003377,NM_001097616	chr1,chr1	-,+	PDZK1P1,GPR89C	-487,-59303
chr1:147484607-147485561	chr1	+	145943107	145943747	False	NR_003377,NM_001097616	chr1,chr1	-,+	PDZK1P1,GPR89C	-488,-59291
chrY:24652504-24653245	chrY	+	24652536	24653272	True	NM_004676,NR_001527	chrY,chrY	+,-	PRY,TTTY6	-16043,-64930
chrY:24652504-24653245	chrY	+	28126531	28127267	False	NR_002179,NR_002176	chrY,chrY	-,+	TTTY17C,TTTY3B	-795611,-251945
chrY:24652504-24653245	chrY	-	24225425	24226161	False	NM_001002758,NR_001527	chrY,chrY	-,+	PRY2,TTTY6	16043,64950
chrY:24652504-24653245	chrY	-	25835102	25835838	False	NR_001524,NM_020363	chrY,chrY	-,+	TTTY3,DAZ2	251981,-469549
chr17:27897682-27899037	chr17	+	27897690	27898762	True	NM_138349,NM_198147	chr17,chr17	+,-	TP53I13,ABHD15	-2002,-3648
chr22:39641067-39641534	chr22	+	39641370	39641534	True	NM_145731,NM_002608,NM_033016	chr22,chr22,chr22	+,-,-	SYNGR1,PDGFB,PDGFB	104419,-413,-4456
chr20:61571313-61571627	chr20	+	61571418	61571522	True	NM_033081,NM_017896,NM_022105,NM_080797	chr20,chr20,chr20,chr20	-,+,-,-	DIDO1,C20orf11,DIDO1,DIDO1	-2114,-2038,-2114,-2114
chr5:157174379-157175088	chr5	+	157174411	157175117	True	NM_173491,NM_178424	chr5,chr5	+,-	LSM11,SOX30	-3707,-94983
chr2:27274713-27276199	chr2	+	27275018	27276127	True	NM_001035507,NM_021831,NM_001134693	chr2,chr2,chr2	+,+,-	AGBL5,AGBL5,OST4	-578,-578,18490
chr7:153756714-153758197	chr7	+	153757546	153758148	True	NM_130797,NM_007349	chr7,chr7	+,-	DPP6,PAXIP1	-7820,1036584
chrX:135229987-135231405	chrX	+	135230659	135231256	True	NM_001173517,NM_001159700,NR_027621,NM_001449,NM_001159703,NM_001159702	chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,+	MAP7D3,FHL1,FHL1,FHL1,FHL1,FHL1	102544,27,-1849,-1151,-1151,-1151
chr11:50151397-50152228	chr11	+	50151598	50152126	True	NR_003034,NM_001001955	chr11,chr11	-,+	LOC441601,OR4C13	105557,-177706
chr11:124670768-124671098	chr11	+	124670817	124671122	True	NM_006176,NM_024631	chr11,chr11	+,-	NRGN,C11orf61	-61040,-518
chr4:113558334-113558616	chr4	+	113558374	113558602	True	NM_018392,NM_015454,NM_016648	chr4,chr4,chr4	-,+,+	C4orf21,LARP7,LARP7	-223,9,-305
chr19:51646353-51646693	chr19	+	51646390	51646662	True	NM_014385,NM_145232,NM_016543	chr19,chr19,chr19	+,-,+	SIGLEC7,CTU1,SIGLEC7	-883,-34743,-883
chr19:51137559-51138790	chr19	+	51137629	51138774	True	NM_001160328,NM_001195076,NM_001160329,NM_032298	chr19,chr19,chr19,chr19	-,+,-,-	SYT3,LOC342918,SYT3,SYT3	4368,13927,4368,2578
chrX:153484428-153485077	chrX	+	153484431	153484591	True	NM_001586,NM_000513,NM_001048181	chrX,chrX,chrX	-,+,+	TEX28,OPN1MW,OPN1MW2	38919,611,611
chrX:153484428-153485077	chrX	+	153447312	153447462	False	NM_001586,NM_000513,NM_001048181	chrX,chrX,chrX	-,+,+	TEX28,OPN1MW,OPN1MW2	76042,622,622
chrX:153484428-153485077	chrX	+	153522238	153522388	False	NM_001205201,NM_001145933,NM_012253,NM_001586	chrX,chrX,chrX,chrX	-,+,+,-	TEX28,TKTL1,TKTL1,TEX28	1226,1638,1638,1116
chr11:75529852-75530483	chr11	+	75529872	75530372	True	NM_003369,NM_207577	chr11,chr11	+,-	UVRAG,MAP6	-3719,-150393
chr10:21436321-21437495	chr10	+	21436454	21437314	True	NM_001177483,NM_001010896,NM_001195627	chr10,chr10,chr10	-,-,+	C10orf113,C10orf113,MLLT10	-966,-966,385786
chr2:130957886-130958259	chr2	+	130957978	130958304	True	NM_025029,NM_207312	chr2,chr2	+,-	MZT2B,TUBA3E	-18539,-1944
chr2:130957886-130958259	chr2	-	132231513	132231675	False	NM_001085365,NM_080386	chr2,chr2	-,+	MZT2A,TUBA3D	18450,1990
chr12:122352377-122352949	chr12	+	122352824	122352952	True	NM_144668,NM_001178003,NM_001171993	chr12,chr12,chr12	+,+,-	WDR66,WDR66,HPD	3527,3510,-26307
chr1:149400056-149400383	chr1	+	149400069	149400403	True	NR_027484,NM_001024599	chr1,chr1	+,-	FCGR1C,HIST2H2BF	-30834,-840
chr1:149400056-149400383	chr1	-	120905024	120905074	False	NR_027337,NM_001004340	chr1,chr1	+,-	HIST2H2BA,FCGR1B	959,30920
chr1:149400056-149400383	chr1	+	149784763	149784821	False	NM_001024599,NM_001161334,NM_001123375,NM_001034077	chr1,chr1,chr1,chr1	-,-,-,+	HIST2H2BF,HIST2H2BF,HIST2H3D,HIST2H4B	-835,-835,473,19399
chr16:67879857-67880252	chr16	+	67879863	67880291	True	NM_025082,NM_020457,NM_005796	chr16,chr16,chr16	-,+,+	CENPT,THAP11,NUTF2	1120,-3701,527
chr10:104534133-104535364	chr10	+	104534156	104535402	True	NM_004311,NM_017787	chr10,chr10	-,+	ARL3,C10orf26	-59966,485
chr17:39521056-39521590	chr17	+	39521236	39521310	True	NM_030975,NM_002279	chr17,chr17	+,-	KRTAP9-9,KRT33B	-109651,4787
chr11:60212233-60213930	chr11	+	60212267	60213871	True	NM_021950,NM_022349,NM_152866	chr11,chr11,chr11	+,-,+	MS4A1,MS4A6A,MS4A1	9410,-261593,9410
chr5:10569827-10571404	chr5	+	10570318	10571215	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-5934,190228
chr11:2423157-2423453	chr11	+	2423294	2423500	True	NM_005706,NM_014555	chr11,chr11	+,-	TSSC4,TRPM5	22,20825
chr6:26225266-26225472	chr6	+	26225268	26225440	True	NM_003518,NM_003532,NM_005320,NM_021052	chr6,chr6,chr6,chr6	-,+,-,+	HIST1H2BG,HIST1H3E,HIST1H1D,HIST1H2AE	-8396,-36,9826,-8171
chr17:4872236-4872473	chr17	+	4872243	4872389	True	NM_004890,NM_053013	chr17,chr17	-,+	SPAG7,ENO3	-1111,-17910
chr5:179111634-179111990	chr5	+	179111633	179111762	True	NM_001024649,NM_001164444	chr5,chr5	+,-	CANX,CBY3	14167,-3658
chr6:7905449-7906490	chr6	+	7905529	7906057	True	NR_027712,NM_001145549,NM_030810	chr6,chr6,chr6	+,-,-	PIP5K1P1,TXNDC5,TXNDC5	80277,4313,5050
chr2:172068683-172069087	chr2	+	172068695	172069133	True	NM_001136554,NM_001164821	chr2,chr2	-,+	TLK1,DCAF17	18744,221627
chr3:156586180-156587726	chr3	+	156586183	156587743	True	NM_001193283,NR_003284	chr3,chr3	+,-	LEKR1,PA2G4P4	-42086,-56373
chr8:59569243-59570055	chr8	+	59569580	59570028	True	NM_005625,NM_003580,NM_001144772	chr8,chr8,chr8	+,-,-	SDCBP,NSMAF,NSMAF	-103910,2434,1996
chr9:140500888-140501125	chr9	+	140500955	140501047	True	NM_152285,NM_032937	chr9,chr9	+,-	ARRDC1,C9orf37	-910,12311
chr1:34648475-34649944	chr1	+	34648539	34649948	True	NM_001134734,NM_052896	chr1,chr1	+,-	C1orf94,CSMD2	-6038,-17096
chr10:31318753-31319714	chr10	+	31318862	31319769	True	NM_001174093,NM_001143768,NM_182755,NR_026560,NM_001143771,NM_001143770,NM_001143766,NM_001143767	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,-,-,-,-,-,-,-	ZEB1,ZNF438,ZNF438,ZNF438,ZNF438,ZNF438,ZNF438,ZNF438	288331,1153,1153,1153,1153,1153,1153,1153
chr7:141630156-141631724	chr7	+	141630260	141631740	True	NM_013252,NM_001001656	chr7,chr7	-,+	CLEC5A,OR9A4	15093,-11635
chr6:88413386-88414393	chr6	+	88413487	88414002	True	NM_018064,NM_001197259,NR_002767	chr6,chr6,chr6	-,+,-	AKIRIN2,ORC3,AKIRIN2-AS1	-1502,-113769,-2554
chr17:71643819-71644389	chr17	+	71643825	71644380	True	NM_001144952,NM_017941	chr17,chr17	-,+	SDK2,C17orf80	-3598,-415100
chr17:19650389-19651506	chr17	+	19650478	19651243	True	NM_000382,NM_001135168,NM_001135167,NM_000691	chr17,chr17,chr17,chr17	+,-,-,-	ALDH3A2,ALDH3A1,ALDH3A1,ALDH3A1	-98465,-1706,-1553,554
chr14:103059226-103059549	chr14	+	103059250	103059540	True	NM_152326,NM_015156	chr14,chr14	-,+	ANKRD9,RCOR1	-83122,-68
chr11:68818696-68819086	chr11	+	68818746	68819102	True	NM_139075,NM_145015	chr11,chr11	+,-	TPCN2,MRGPRF	-2455,-37896
chrX:71792746-71792999	chrX	+	71792811	71793021	True	NM_018486,NM_001080851,NM_001166448,NM_001166419,NM_001166418,NM_001166422,NM_001166420	chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,+,-,-,-,-,-	HDAC8,DMRTC1B,HDAC8,HDAC8,HDAC8,HDAC8,HDAC8	-18,271854,-18,-18,-18,-18,-18
chr16:420753-420994	chr16	+	420901	421017	True	NM_006428,NR_024453	chr16,chr16	-,+	MRPL28,LOC100134368	-332,11223
chr12:4753325-4754933	chr12	+	4753368	4754828	True	NM_006422,NM_005002	chr12,chr12	-,+	AKAP3,NDUFA9	-27,3435
chr15:91538139-91538759	chr15	+	91538158	91538725	True	NM_199413,NM_033544,NM_199414,NM_003981	chr15,chr15,chr15,chr15	-,+,-,-	PRC1,RCCD1,PRC1,PRC1	-354,-40103,-354,-354
chr9:210125-211563	chr9	+	210607	211596	True	NM_203447,NM_152569	chr9,chr9	+,-	DOCK8,C9orf66	3268,4354
chr1:150335629-150336363	chr1	+	150335747	150336150	True	NM_016022,NM_015203	chr1,chr1	-,+	APH1A,RPRD2	-94215,839
chr2:44592674-44594157	chr2	+	44592826	44594206	True	NM_024766,NM_001171617,NM_006036,NM_001042386,NM_001171603,NM_001042385,NM_001171606,NM_001171613	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-,-,-	CAMKMT,PREPL,PREPL,PREPL,PREPL,PREPL,PREPL,PREPL	-3834,-3825,-5013,-5938,-3825,-5938,-4126,-4126
chr4:84371420-84371838	chr4	+	84371536	84371747	True	NM_133636,NM_016067	chr4,chr4	-,+	HELQ,MRPS18C	5335,5370
chr14:23424352-23425426	chr14	+	23424484	23425457	True	NM_017815,NM_173527,NM_001166269,NM_001166270	chr14,chr14,chr14,chr14	-,+,-,-	HAUS4,REM2,HAUS4,HAUS4	944,-72103,944,944
chr4:9677834-9679652	chr4	+	9678683	9679533	True	NR_031688,NM_000798	chr4,chr4	-,+	MIR548I2,DRD5	-120746,103724
chrX:2419121-2419487	chrY	+	2369410	2369480	False	NM_001171135,NM_001171136,NM_004729,NM_145177,NR_033381	chrY,chrY,chrY,chrY,chrY	-,-,-,-,+	ZBED1,ZBED1,ZBED1,DHRSX,CD99P1	-830,-402,-402,-395,107825
chrX:2419121-2419487	chrX	+	2419410	2419480	True	NM_001171135,NM_001171136,NM_004729,NM_145177,NR_033381	chrX,chrX,chrX,chrX,chrX	-,-,-,-,+	ZBED1,ZBED1,ZBED1,DHRSX,CD99P1	-830,-402,-402,-395,107825
chr6:146865294-146865604	chr6	+	146865329	146865605	True	NR_003954,NM_006834	chr6,chr6	-,+	LOC729176,RAB32	259405,-552
chrY:7140849-7141318	chrY	+	7140884	7141320	True	NR_028062,NM_001143	chrY,chrY	+,-	PRKY,AMELY	692,-398816
chr12:7024358-7024653	chr12	+	7024430	7024642	True	NM_032641,NM_001007026,NM_001975	chr12,chr12,chr12	-,+,+	SPSB2,ATN1,ENO2	-41909,8983,-867
chr1:247511561-247512393	chr1	+	247511600	247512215	True	NM_032752,NM_001079821	chr1,chr1	-,+	ZNF496,NLRP3	-16555,67242
chr11:18653672-18654054	chr11	+	18653718	18653849	True	NM_153347,NM_194285	chr11,chr11	+,-	TMEM86A,SPTY2D1	66501,2226
chrX:152612158-152612615	chrX	+	152612232	152612520	True	NM_001080485,NM_080701	chrX,chrX	+,-	ZNF275,TREX2	-12670,99475
chr6:41511642-41513065	chr6	+	41511656	41512707	True	NM_001012426,NM_001012427,NM_007162,NM_138457	chr6,chr6,chr6,chr6	+,+,-,+	FOXP4,FOXP4,TFEB,FOXP4	1456,1456,190142,1456
chr20:22563929-22564168	chr20	+	22563935	22564217	True	NM_021784,NM_153675,NR_001558,NM_001052	chr20,chr20,chr20,chr20	-,-,-,+	FOXA2,FOXA2,NCRNA00261,SSTR4	934,1934,-4655,451839
chr13:114584153-114585820	chr13	+	114584782	114585784	True	NM_000820,NR_024609	chr13,chr13	-,+	GAS6,FLJ44054	-17736,825
chrY:4867391-4868118	chrY	+	4867597	4867945	True	NM_032971,NR_001540	chrY,chrY	+,-	PCDH11Y,TTTY23	321,1243756
chrY:4867391-4868118	chrX	+	91033634	91033860	False	NM_032967,NM_004538	chrX,chrX	+,-	PCDH11X,NAP1L3	399,1894872
chr16:5083921-5084883	chr16	+	5083960	5084858	True	NM_019109,NM_016256	chr16,chr16	+,-	ALG1,NAGPA	36951,-18
chr12:51154589-51155165	chr12	+	51154589	51154788	True	NM_005171,NM_001174130	chr12,chr12	+,-	ATF1,SLC11A2	3000,248328
chr22:25427643-25429480	chr22	+	25427671	25429510	True	NM_001001663,NM_001145206	chr22,chr22	-,+	TMEM211,KIAA1671	-92357,-3781
chr19:10764456-10764955	chr19	+	10764477	10764839	True	NM_017620,NM_012218,NM_153464,NM_001137673,NR_024333,NM_004516	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,-,+	ILF3,ILF3,ILF3,ILF3,LOC147727,ILF3	97,97,97,97,71,97
chr3:97219425-97221306	chr3	+	97219518	97221000	True	NM_001042533,NM_173655	chr3,chr3	-,+	MINA,EPHA6	470287,-61089
chr3:52097662-52099458	chr3	+	52097832	52099428	True	NM_001198898,NM_001947,NR_027331	chr3,chr3,chr3	+,-,-	ACY1,DUSP7,C3orf74	-80590,-7371,50
chr19:53323663-53323889	chr19	+	53323697	53323913	True	NR_036599,NR_036600,NM_152473,NM_006969	chr19,chr19,chr19,chr19	-,-,+,-	ZNF28,ZNF28,HERV-V1,ZNF28	1059,1059,193430,1059
chr19:53323663-53323889	chr19	+	53359840	53359902	False	NM_199132,NM_152473,NM_001008801	chr19,chr19,chr19	-,+,-	ZNF468,HERV-V1,ZNF468	1050,157441,1050
chr8:122653875-122654206	chr8	+	122653874	122654252	True	NR_002835,NM_005328	chr8,chr8	+,-	HAS2-AS1,HAS2	-2348,-244
chr16:16313414-16313650	chr16	+	16313426	16313696	True	NM_001171,NM_001079528,NM_001004067	chr16,chr16,chr16	-,-,+	ABCC6,ABCC6,NOMO3	3682,3682,12692
chr16:16313414-16313650	chr16	-	18586410	18586460	False	NR_003569,NM_173614	chr16,chr16	+,-	ABCC6P1,NOMO2	-3891,-12976
chr16:16313414-16313650	chr16	+	14914664	14914934	False	NR_023387,NM_014287	chr16,chr16	-,+	ABCC6P2,NOMO1	3675,12708
chr7:74681870-74682478	chr7	+	74682055	74682309	True	NM_001003795,NR_003580	chr7,chr7	+,-	GTF2IRD2B,LOC100093631	-173770,-28596
chr7:74681870-74682478	chr7	-	72540318	72540572	False	NR_003664,NR_003580	chr7,chr7	-,+	SPDYE8P,LOC100093631	-40009,28439
chr7:74681870-74682478	chr7	-	74349776	74350030	False	NM_001025202,NM_001145063	chr7,chr7	-,+	STAG3L2,GATSL1	-43045,29052
chr7:74681870-74682478	chr7	+	74896308	74896562	False	NM_001145064,NR_003664	chr7,chr7	-,+	GATSL2,SPDYE8P	-28967,39970
chr11:66316569-66318460	chr11	+	66316612	66318378	True	NM_001104,NM_207340	chr11,chr11	+,-	ACTN3,ZDHHC24	-2272,-2941
chr3:4509806-4510519	chr3	+	4509904	4510536	True	NM_001099952,NM_182760,NM_001164675,NM_001164674	chr3,chr3,chr3,chr3	+,-,-,-	ITPR1,SUMF1,SUMF1,SUMF1	24495,-938,-938,-938
chr5:54808843-54809393	chr5	+	54808843	54809447	True	NR_001575,NM_015360	chr5,chr5	-,+	RNF138P1,SKIV2L2	20981,-205325
chr9:80852895-80853521	chr9	+	80853067	80853400	True	NM_001098802,NM_002072,NM_032171	chr9,chr9,chr9	+,-,+	CEP78,GNAQ,CEP78	-2127,-206848,-2127
chr7:134591095-134591709	chr7	+	134591147	134591735	True	NM_033140,NM_024033	chr7,chr7	+,-	CALD1,C7orf49	-15064,263847
chr2:47143408-47143932	chr2	+	47143492	47143768	True	NM_139279,NM_001171509,NM_020458,NM_001171507,NM_001171510,NM_001171506	chr2,chr2,chr2,chr2,chr2,chr2	-,-,+,-,-,-	MCFD2,MCFD2,TTC7A,MCFD2,MCFD2,MCFD2	-485,-485,24544,-241,-241,-485
chr14:41188784-41190501	chr14	+	41189724	41190523	True	NM_152447,NM_203301	chr14,chr14	+,-	LRFN5,FBXO33	886240,-1288020
chr1:231004986-231005385	chr1	+	231005014	231005414	True	NM_001136494,NM_032800,NM_022786	chr1,chr1,chr1	-,-,+	C1orf198,C1orf198,ARV1	-5,-712,109408
chr2:103095484-103095781	chr2	+	103095484	103095788	True	NM_001011552,NM_032718	chr2,chr2	+,-	SLC9A4,MFSD9	-5773,257599
chr3:49452385-49452803	chr3	+	49452473	49452603	True	NR_028435,NM_022171,NM_000481,NM_001164712,NM_001664,NM_001164710,NM_001164711	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-,-	AMT,TCTA,AMT,AMT,RHOA,AMT,AMT	7558,-2885,7558,7558,-2947,7558,7558
chr22:24402425-24402828	chr22	+	24402527	24402597	True	NR_003082,NM_012295,NM_001201429,NM_001199281	chr22,chr22,chr22,chr22	-,+,+,+	GSTTP2,CABIN1,CABIN1,CABIN1	-628,5167,5167,5222
chr19:55363480-55364486	chr19	+	55363507	55364383	True	NM_006737,NM_001127255	chr19,chr19	+,-	KIR3DL2,NLRP7	-1660,94540
chr2:160599302-160600589	chr2	+	160599480	160599846	True	NM_001198763,NM_022826	chr2,chr2	-,+	CD302,MARCH7	54974,-30529
chr22:38239352-38239810	chr22	+	38239481	38239687	True	NM_138797,NR_030395,NM_016091,NR_036556,NR_030396	chr22,chr22,chr22,chr22,chr22	-,-,+,-,-	ANKRD54,MIR658,EIF3L,ANKRD54,MIR659	716,741,5682,716,4144
chrX:153141524-153143389	chrX	+	153141766	153143369	True	NM_000425,NM_001143963,NM_024003,NR_027419	chrX,chrX,chrX,chrX	-,-,-,+	L1CAM,L1CAM,L1CAM,AVPR2	-367,-367,-367,24615
chr16:72130367-72130757	chr16	+	72130372	72130800	True	NM_001142317,NM_017853,NM_014003,NM_001142318	chr16,chr16,chr16,chr16	-,-,+,-	TXNL4B,TXNL4B,DHX38,TXNL4B	-2604,-2833,-2808,-2157
chr3:99792600-99793831	chr3	+	99792614	99793176	True	NM_001167924,NM_182909	chr3,chr3	+,-	C3orf26,FILIP1L	40597,40223
chr13:20207594-20208116	chr13	+	20207612	20208004	True	NM_199254,NM_017520	chr13,chr13	-,+	TPTE2,MPHOSPH8	-96709,-5
chr4:24975809-24976115	chr4	+	24975836	24976160	True	NM_003102,NM_173463	chr4,chr4	+,-	SOD3,CCDC149	-178802,5716
chr4:8160857-8161074	chr4	+	8160862	8161048	True	NM_001130083,NM_001130087,NM_001130086,NM_001130085,NM_001130084,NM_001130088,NM_032432,NM_018986	chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4	-,-,-,-,-,-,-,+	ABLIM2,ABLIM2,ABLIM2,ABLIM2,ABLIM2,ABLIM2,ABLIM2,SH3TC1	-303,-303,-303,-303,-303,-303,-303,40011
chr15:52266008-52266573	chr15	+	52266141	52266582	True	NM_138792,NM_002748	chr15,chr15	-,+	LEO1,MAPK6	-2183,44828
chr10:81967393-81967674	chr10	+	81967481	81967628	True	NM_145869,NM_145868,NM_001012973,NM_001157	chr10,chr10,chr10,chr10	-,-,+,-	ANXA11,ANXA11,PLAC9,ANXA11	-2153,-2153,-75274,-2153
chr4:76475802-76476871	chr4	+	76475834	76476584	True	NR_037914,NM_178497	chr4,chr4	-,+	RCHY1,C4orf26	-36194,4673
chr6:6318310-6318718	chr6	+	6318354	6318610	True	NM_000129,NM_004271	chr6,chr6	-,+	F13A1,LY86	2364,270323
chr9:72434699-72435203	chr9	+	72434703	72435059	True	NM_001099666,NM_001010940	chr9,chr9	-,+	PTAR1,C9orf135	-59827,671
chr7:65215338-65215604	chr7	+	65215374	65215622	True	NR_003110,NM_000181,NR_002961	chr7,chr7,chr7	+,-,+	CCT6P1,GUSB,SNORA22	469,231729,4890
chr3:48501622-48503329	chr3	+	48502129	48502995	True	NM_033629,NM_024661,NM_016381	chr3,chr3,chr3	+,-,+	TREX1,CCDC51,TREX1	4233,-20600,4233
chr11:64020455-64020678	chr11	+	64020523	64020723	True	NM_138689,NM_000932,NM_001184883	chr11,chr11,chr11	-,+,+	PPP1R14B,PLCB3,PLCB3	-6110,-1579,-1579
chr14:34418607-34418879	chr14	+	34418606	34418914	True	NR_002937,NM_022073	chr14,chr14	+,-	C14orf19,EGLN3	990213,1420
chr16:28887856-28888538	chr16	+	28887970	28888528	True	NM_003321,NM_173201,NM_004320	chr16,chr16,chr16	-,+,+	TUFM,ATP2A1,ATP2A1	-30241,1280,1280
chr9:129619284-129619529	chr9	+	129619478	129619568	True	NM_001099270,NM_012098	chr9,chr9	+,-	ZBTB34,ANGPTL2	3375,265526
chr1:241802899-241803440	chr1	+	241803167	241803399	True	NM_014322,NM_144625,NM_001821	chr1,chr1,chr1	-,+,-	OPN3,WDR64,CHML	352,12180,-3935
chr19:58991029-58991288	chr19	+	58991034	58991244	True	NM_012254,NM_017908	chr19,chr19	-,+	SLC27A5,ZNF446	32238,-3290
chr7:134677041-134678271	chr7	+	134677049	134677884	True	NM_178563,NM_024033	chr7,chr7	+,-	AGBL3,C7orf49	-5848,177699
chr1:119531141-119531730	chr1	+	119531177	119531769	True	NM_001005783,NM_152380	chr1,chr1	+,-	HAO2,TBX15	379632,460
chr14:58760114-58761718	chr14	+	58760244	58761765	True	NM_023000,NM_023001,NM_002892,NR_029434,NR_029435	chr14,chr14,chr14,chr14,chr14	+,+,+,-,-	ARID4A,ARID4A,ARID4A,FLJ31306,FLJ31306	3456,3456,3456,3140,3140
chr8:9910425-9911785	chr8	+	9910905	9911759	True	NM_001135670,NR_029668,NM_012331	chr8,chr8,chr8	+,-,+	MSRA,MIR124-1,MSRA	70,-149923,70
chr7:134578265-134578980	chr7	+	134578301	134579013	True	NM_033139,NM_033140,NM_024033	chr7,chr7,chr7	+,+,-	CALD1,CALD1,C7orf49	-2202,-2202,276569
chr9:34381384-34381598	chr9	+	34381386	34381628	True	NM_147168,NM_147169,NM_020702,NM_147173	chr9,chr9,chr9,chr9	-,-,-,+	C9orf24,C9orf24,KIAA1161,NUDT2	20,20,-4492,-51933
chr20:44454418-44454805	chr20	+	44454570	44454828	True	NM_003279,NM_033421,NM_001042632,NM_001042633,NM_152897	chr20,chr20,chr20,chr20,chr20	-,+,+,+,+	TNNC2,SNX21,SNX21,SNX21,SNX21	1175,7641,7641,7641,7641
chr3:46411081-46412476	chr3	+	46411227	46412449	True	NM_001199149,NM_000579,NM_001100168	chr3,chr3,chr3	-,+,+	LTF,CCR5,CCR5	92762,62,62
chr16:67186506-67187012	chr16	+	67186622	67186998	True	NM_003789,NM_033309,NM_018378	chr16,chr16,chr16	-,-,+	TRADD,B3GNT9,FBXL8	6864,-1720,6892
chr19:53632119-53633172	chr19	+	53632221	53633007	True	NM_001164309,NR_028343,NM_001191055,NM_018355,NM_001136038	chr19,chr19,chr19,chr19,chr19	-,-,+,-,-	ZNF415,ZNF415,HERV-V2,ZNF415,ZNF415	3214,3216,-84281,3188,3214
chr1:76399076-76400064	chr1	+	76399262	76400076	True	NM_080868,NR_026546,NM_002440	chr1,chr1,chr1	-,-,+	ASB17,ASB17,MSH4	-1146,-1146,-136693
chr2:171922206-171923964	chr2	+	171922343	171923565	True	NM_015530,NM_001136555	chr2,chr2	+,-	GORASP2,TLK1	-137366,-12
chr19:5567630-5567944	chr19	+	5567721	5567917	True	NM_001201338,NR_027064	chr19,chr19	+,-	SAFB,PLAC2	55128,138
chr8:8751840-8753469	chr8	+	8752050	8753230	True	NM_153332,NM_004225	chr8,chr8	+,-	ERI1,MFHAS1	107083,-919
chr15:72488984-72489319	chr15	+	72489007	72489323	True	NM_001012642,NM_145204	chr15,chr15	-,+	GRAMD2,SENP8	863,-78427
chr9:128509766-128509975	chr9	+	128509885	128509959	True	NM_001006618,NM_006195,NR_024123,NR_024122,NM_001134778	chr9,chr9,chr9,chr9,chr9	-,+,+,+,+	MAPKAP1,PBX3,PBX3,PBX3,PBX3	-40372,-319,-319,-319,518
chr17:48173300-48173552	chr17	+	48173320	48173568	True	NM_001199899,NM_001199898,NM_174920,NM_002611,NM_001199900	chr17,chr17,chr17,chr17,chr17	+,+,-,+,+	PDK2,PDK2,SAMD14,PDK2,PDK2	-312,-1270,33649,-732,-732
chr15:32321714-32322191	chr15	+	32321925	32322095	True	NM_001190455,NM_000746,NM_130901	chr15,chr15,chr15	+,+,-	CHRNA7,CHRNA7,OTUD7A	595,595,-374383
chr6:168427852-168428335	chr6	+	168428199	168428285	True	NM_030615,NM_001122841,NM_005355	chr6,chr6,chr6	+,-,+	KIF25,FRMD1,KIF25	-9705,48297,-9705
chr6:32189860-32191160	chr6_qbl_hap6	+	3451388	3451438	True	NR_003129,NM_004557	chr6_qbl_hap6,chr6_qbl_hap6	+,-	RNF5P1,NOTCH4	-44187,1477
chr10:14884312-14884689	chr10	+	14884323	14884609	True	NM_001029954,NM_016299	chr10,chr10	-,+	CDNF,HSPA14	-4340,-4113
chr3:150956093-150956861	chr3	+	150956313	150956883	True	NM_053002,NM_001081455	chr3,chr3	+,-	MED12L,P2RY14	-151704,10165
chr10:31989192-31989394	chr10	+	31989198	31989354	True	NM_001174094,NM_018287	chr10,chr10	+,-	ZEB1,ARHGAP12	-379188,228466
chrX:139586002-139586278	chrX	+	139586014	139586306	True	NR_028345,NM_005634	chrX,chrX	+,-	RP1-177G6.2,SOX3	205617,969
chrX:47513898-47515584	chrX	+	47513915	47515565	True	NM_005229,NR_028119,NM_004182,NR_027444,NM_153477,NM_001114123	chrX,chrX,chrX,chrX,chrX,chrX	-,+,-,+,-,-	ELK1,LOC100133957,UXT,LOC100133957,UXT,ELK1	-3912,2666,3054,2686,3010,-3912
chr11:63533654-63533882	chr11	+	63533653	63533861	True	NM_138471,NM_001144936	chr11,chr11	+,-	C11orf84,C11orf95	47061,2302
chr12:18237476-18237833	chr12	+	18237479	18237712	True	NM_004570,NM_024730	chr12,chr12	+,-	PIK3C2G,RERGL	176761,5459
chr8:92081719-92082479	chr8	+	92081779	92082355	True	NM_016023,NM_018710	chr8,chr8	+,-	OTUD6B,TMEM55A	68,-28576
chr9:102584598-102584808	chr9	+	102584624	102584780	True	NM_173199,NM_015051,NM_173200,NM_006981	chr9,chr9,chr9,chr9	+,-,+,+	NR4A3,ERP44,NR4A3,NR4A3	-538,276600,4228,-538
chr7:76040738-76042088	chr7	+	76041025	76041754	True	NM_080744,NM_001110354	chr7,chr7	-,+	SRCRB4D,ZP3	-2013,12517
chr8:99839484-99839973	chr8	+	99839576	99839762	True	NM_006281,NM_001142462	chr8,chr8	-,+	STK3,OSR2	-1667,116868
chr5:175232593-175233652	chr5	+	175232758	175233434	True	NM_032361,NM_006650	chr5,chr5	-,+	THOC3,CPLX2	162161,-9199
chr12:93325670-93325921	chr12	+	93325700	93325786	True	NM_001004330,NM_003566	chr12,chr12	+,-	PLEKHG7,EEA1	-195489,-2593
chr2:177131213-177132532	chr2	+	177131268	177132340	True	NR_033979,NM_006554,NR_027850	chr2,chr2,chr2	-,+,+	LOC401022,MTX2,MTX2	-77582,1782,1782
chr11:72431528-72432213	chr11	+	72431589	72432189	True	NM_015242,NM_001135190,NM_033388	chr11,chr11,chr11	-,-,+	ARAP1,ARAP1,ATG16L2	1264,1264,93261
chr11:2230349-2230588	chr11	+	2230371	2230479	True	NM_199293,NR_028044	chr11,chr11	-,+	TH,IGF2AS	-37336,-68664
chr10:31301211-31301968	chr10	+	31301562	31301954	True	NM_001143769,NM_001174093	chr10,chr10	-,+	ZNF438,ZEB1	-13116,306146
chr12:123758060-123758468	chr12	+	123758094	123758284	True	NM_001143905,NM_004642	chr12,chr12	+,-	C12orf65,CDK2AP1	-39854,-1407
chr2:172949357-172949668	chr2	+	172949466	172949630	True	NM_178120,NM_001038493,NM_004405	chr2,chr2,chr2	+,+,-	DLX1,DLX1,DLX2	577,577,17898
chr1:150897854-150898105	chr1	+	150897863	150898004	True	NM_001145415,NM_001668,NR_026977,NM_012432	chr1,chr1,chr1,chr1	+,-,+,+	SETDB1,ARNT,SETDB1,SETDB1	810,-48619,820,810
chr2:26781491-26781762	chr2	+	26781560	26781794	True	NM_001105519,NM_194248	chr2,chr2	+,-	C2orf70,OTOF	3686,6
chr1:57430501-57430833	chr1	+	57430552	57430764	True	NM_000562,NM_000066	chr1,chr1	+,-	C8A,C8B	-110160,974
chr19:35993460-35994100	chr19	+	35993704	35994084	True	NM_014364,NR_033746,NM_001035516,NM_001126059	chr19,chr19,chr19,chr19	+,-,-,-	GAPDHS,DMKN,DMKN,DMKN	30229,7378,-891,7357
chr4:119601761-119602613	chr4	+	119601760	119602630	True	NM_014822,NM_020961	chr4,chr4	-,+	SEC24D,METTL14	154746,3943
chr19:42303797-42304335	chr19	+	42303846	42304292	True	NM_173506,NM_001815	chr19,chr19	-,+	LYPD4,CEACAM3	44266,-3363
chr11:126048080-126048436	chr11	+	126048140	126048297	True	NM_001144827,NM_024556	chr11,chr11	-,+	RPUSD4,FAM118B	33345,33321
chr1:204652735-204653575	chr1	+	204652807	204653477	True	NM_201630,NM_001005389,NM_006338	chr1,chr1,chr1	-,+,-	LRRN2,NFASC,LRRN2	1170,144304,1054
chr11:131243493-131243819	chr11	+	131243498	131243758	True	NM_001048209,NM_014758	chr11,chr11	+,-	NTM,SNX19	-3178,-457116
chr18:14965719-14966734	chr18	+	14965767	14966507	True	NR_027417,NR_036153	chr18,chr18	-,+	LOC644669,MIR3156-2	359461,-135653
chr3:13523462-13524002	chr3	+	13523569	13523948	True	NM_001136041,NM_024827,NM_024923	chr3,chr3,chr3	+,+,-	HDAC11,HDAC11,NUP210	-1776,-1905,-61760
chr3:50127201-50127614	chr3	+	50127221	50127594	True	NR_036627,NM_032355,NM_005778	chr3,chr3,chr3	+,-,+	RBM5,MON1A,RBM5	-926,-159776,-926
chr18:75687088-75687881	chr18	+	75687110	75687910	True	NM_001480,NM_001025100	chr18,chr18	+,-	GALR1,MBP	-725154,-842336
chr2:149403005-149403343	chr2	+	149403020	149403356	True	NM_181742,NM_015630	chr2,chr2	-,+	ORC4,EPC2	-623847,-511
chr3:46063001-46063647	chr3	+	46063041	46063519	True	NM_005283,NM_001024644,NM_006564	chr3,chr3,chr3	-,-,+	XCR1,XCR1,CXCR6	5510,5510,-78119
chr7:43622134-43622443	chr7	+	43622231	43622405	True	NM_018224,NM_004760	chr7,chr7	-,+	C7orf44,STK17A	146728,286
chr10:134902578-134902785	chr10	+	134902619	134902717	True	NM_173572,NM_001083909	chr10,chr10	-,+	C10orf93,GPR123	-146530,-1261
chrX:118710556-118711045	chrX	+	118710556	118710823	True	NM_181762,NM_003336,NM_181777,NM_022101	chrX,chrX,chrX,chrX	+,+,+,-	UBE2A,UBE2A,UBE2A,CXorf56	-2116,-2116,3474,-11159
chr12:54427308-54427692	chr12	+	54427319	54427549	True	NM_004503,NM_018953,NR_030753,NR_026658	chr12,chr12,chr12,chr12	+,+,+,-	HOXC6,HOXC5,MIR615,LOC100240735	-5176,-538,184,48108
chr3:47050485-47050821	chr3	+	47050509	47050821	True	NR_024046,NM_144716	chr3,chr3	+,-	NRADDP,CCDC12	2210,-32239
chr19:10344470-10345274	chr19	+	10344643	10344922	True	NR_036206,NM_004230	chr19,chr19	+,-	MIR4322,S1PR2	-3614,-2695
chr19:57031373-57032175	chr19	+	57031401	57032057	True	NM_020813,NR_030740	chr19,chr19	+,-	ZNF471,ZNF667	-12240,-42631
chr3:72924985-72925515	chr3	+	72925171	72925371	True	NM_001080393,NM_018130	chr3,chr3	+,-	GXYLT2,SHQ1	12013,-27573
chr18:56888167-56888464	chr18	+	56888172	56888414	True	NM_013435,NM_001012512,NM_001012513,NM_002091	chr18,chr18,chr18,chr18	-,+,+,+	RAX,GRP,GRP,GRP	52261,-823,-823,-823
chr9:70489100-70489542	chr9	+	70489490	70489574	True	NM_001024916,NM_201453	chr9,chr9	-,-	CBWD5,CBWD3	647,653
chr9:70489100-70489542	chr9	+	69261921	69261993	False	NM_001085457,NM_001098805	chr9,chr9	-,+	CBWD6,ANKRD20A4	650,119987
chr9:70489100-70489542	chr9	-	70857441	70857513	False	NR_015423,NM_201453	chr9,chr9	-,+	LOC572558,CBWD3	115294,-653
chr1:24193496-24194276	chr1	+	24193625	24194099	True	NM_000147,NM_007260	chr1,chr1	-,+	FUCA1,LYPLA2	810,-76031
chr12:64216719-64217155	chr12	+	64216738	64217182	True	NM_020762,NM_173812	chr12,chr12	+,-	SRGAP1,DPY19L2	21358,-154384
chr7:107767306-107767662	chr7	+	107767337	107767699	True	NM_007356,NM_000108	chr7,chr7	-,+	LAMB4,DLD	3152,-235802
chr2:183370292-183372112	chr2	+	183370536	183372042	True	NM_018981,NM_005019	chr2,chr2	+,-	DNAJC10,PDE1A	208956,15268
chr16:48270946-48272568	chr16	+	48271087	48272394	True	NM_145186,NM_033151,NM_032583,NM_031490	chr16,chr16,chr16,chr16	-,-,-,+	ABCC11,ABCC11,ABCC11,LONP2	-1999,-4905,-1999,5816
chr12:55005005-55005630	chr12	+	55005105	55005613	True	NM_001165975,NR_003039	chr12,chr12	+,-	PDE1B,GLYCAM1	-50057,-859
chr12:96429420-96429844	chr12	+	96429467	96429812	True	NM_000895,NM_152435	chr12,chr12	-,+	LTA4H,AMDHD1	-102,-92447
chr12:58132407-58132668	chr12	+	58132454	58132648	True	NM_001122772,NM_005981,NM_014770	chr12,chr12,chr12	-,+,-	AGAP2,TSPAN31,AGAP2	-425,6135,3342
chr9:117147764-117149757	chr9	+	117147860	117148723	True	NM_030767,NM_000608	chr9,chr9	-,+	AKNA,ORM2	8012,-55842
chr20:328243-328464	chr20	+	328254	328370	True	NM_153269,NM_024958	chr20,chr20	-,+	C20orf96,NRSN2	-56864,-935
chr1:40255138-40255389	chr1	+	40255197	40255377	True	NM_001720,NM_001195007	chr1,chr1	-,+	BMP8B,PPIE	-664,-50731
chr1:110199539-110199777	chr1	+	110199596	110199726	True	NM_000850,NM_147148,NR_024538,NM_005272	chr1,chr1,chr1,chr1	+,+,+,-	GSTM4,GSTM4,GSTM4,GNAT2	-949,-949,-949,-43891
chr1:110199539-110199777	chr1	+	110231120	110231184	False	NM_000561,NM_000849,NM_146421	chr1,chr1,chr1	+,-,+	GSTM1,GSTM3,GSTM1	-753,52526,-753
chr7:39768695-39769321	chr7	+	39768761	39768982	True	NM_138701,NR_026999	chr7,chr7	-,+	C7orf11,NCRNA00265	405326,4184
chr17:60463381-60465339	chr17	+	60463851	60465285	True	NM_173503,NR_027486	chr17,chr17	+,-	EFCAB3,TBC1D3P2	-5995,-110835
chr11:205625-206005	chr11	+	205624	206028	True	NM_016526,NM_001098787,NM_021932,NM_053280	chr11,chr11,chr11,chr11	-,-,+,+	BET1L,BET1L,RIC8A,ODF3	1444,1444,2501,-8914
chr7:72847734-72847974	chr7	+	72847831	72847975	True	NM_003508,NM_032408	chr7,chr7	+,-	FZD9,BAZ1B	133,88690
chr19:14890331-14890707	chr19	+	14890472	14890582	True	NM_152917,NM_152916,NM_152919,NM_152918,NM_032433,NM_013447,NM_152920,NM_152921	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,+,-,-,-	EMR2,EMR2,EMR2,EMR2,ZNF333,EMR2,EMR2,EMR2	-1119,-1119,-1119,-1119,-89653,-1119,-1119,-1119
chr3:45877080-45877623	chr3	+	45877123	45877542	True	NM_020347,NM_006641	chr3,chr3	-,+	LZTFL1,CCR9	6138,50453
chr9:114285181-114285987	chr9	+	114285182	114285868	True	NM_001007169,NM_001080398,NM_133464	chr9,chr9,chr9	+,-,+	ZNF483,KIAA0368,ZNF483	1578,-38157,1578
chr8:13325935-13326420	chr8	+	13325953	13326321	True	NM_001007090,NM_182643	chr8,chr8	+,-	C8orf48,DLC1	98030,46164
chr15:51604335-51604770	chr15	+	51604357	51604770	True	NM_000103,NM_181789	chr15,chr15	-,+	CYP19A1,GLDN	26076,28942
chr20:22563270-22563505	chr20	+	22563285	22563417	True	NM_021784,NM_153675,NR_001558,NM_001052	chr20,chr20,chr20,chr20	-,-,-,+	FOXA2,FOXA2,NCRNA00261,SSTR4	1734,2734,-4005,452639
chr4:175441112-175441697	chr4	+	175441197	175441726	True	NM_000860,NR_036236,NR_027332,NM_001145816	chr4,chr4,chr4,chr4	-,+,-,-	HPGD,MIR4276,HPGD,HPGD	2117,-96309,2369,2117
chr3:52866223-52866620	chr3	+	52866333	52866609	True	NM_002218,NM_001166449,NM_205853,NM_002217	chr3,chr3,chr3,chr3	-,-,-,+	ITIH4,ITIH4,MUSTN1,ITIH3	-1616,-1616,2676,-37600
chr19:49544322-49544733	chr19	+	49544612	49544792	True	NR_024244,NM_033183,NR_004383,NM_033377,NM_033043,NM_033378	chr19,chr19,chr19,chr19,chr19,chr19	-,-,+,-,+,+	SNAR-G2,CGB8,SNAR-G1,CGB1,CGB5,CGB2	-9568,7638,-4386,-4421,2309,-9533
chr10:71079336-71079819	chr10	+	71079341	71079791	True	NM_033496,NM_001057,NM_000188	chr10,chr10,chr10	+,-,+	HK1,TACR2,HK1	-3782,96933,-789
chr1:169555969-169556655	chr1	+	169555992	169556527	True	NM_018186,NM_000130	chr1,chr1	+,-	C1orf112,F5	208022,-223
chrX:103268718-103269592	chrX	+	103268717	103269571	True	NM_001002916,NM_001164416	chrX,chrX	-,+	H2BFWT,H2BFM	-461,24944
chr10:6129022-6130748	chr10	+	6129629	6130636	True	NM_001145547,NM_032905,NM_000417	chr10,chr10,chr10	+,+,-	RBM17,RBM17,IL2RA	672,312,-25296
chr17:28886193-28886426	chr17	+	28886198	28886314	True	NM_206832,NM_015594	chr17,chr17	-,+	TMIGD1,TBC1D29	-225133,269
chr22:39746364-39746582	chr22	+	39746392	39746631	True	NM_001033853,NM_145731,NM_004711	chr22,chr22,chr22	-,+,+	RPL3,SYNGR1,SYNGR1	-30722,-489,-489
chr3:69088459-69089797	chr3	+	69088671	69089754	True	NR_036087,NM_006407	chr3,chr3	-,+	MIR3136,ARL6IP5	8495,44335
chr4:94748684-94749576	chr4	+	94748845	94749437	True	NM_005172,NM_014485	chr4,chr4	+,-	ATOH1,HPGDS	640,514640
chr5:132077336-132078284	chr5	+	132077593	132078081	True	NM_007054,NM_001039780	chr5,chr5	-,+	KIF3A,CCNI2	-4328,5055
chr9:88895716-88896557	chr9	+	88895931	88896589	True	NM_024635,NM_030940	chr9,chr9	+,-	NAA35,ISCA1	-339925,951
chr9:139579647-139580432	chr9	+	139579738	139580382	True	NR_029695,NM_006412,NM_001012727	chr9,chr9,chr9	+,-,-	MIR126,AGPAT2,AGPAT2	-14735,1579,1579
chr4:165900813-165901106	chr4	+	165900898	165901000	True	NM_153027,NM_001012414	chr4,chr4	+,-	C4orf39,TRIM61	-22850,-2080
chr1:28163281-28163864	chr1	+	28163410	28163669	True	NM_014110,NR_002997,NM_002713,NM_138558,NM_002946	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	PPP1R8,SCARNA1,PPP1R8,PPP1R8,RPA2	-6219,-2559,-6146,-6146,77618
chr5:130498823-130500244	chr5	+	130498822	130500124	True	NM_181705,NR_024611,NR_024610,NM_005340	chr5,chr5,chr5,chr5	+,-,-,-	LYRM7,HINT1,HINT1,HINT1	6516,952,960,960
chr15:93633276-93634305	chr15	+	93633390	93634322	True	NM_001166287,NM_020211,NR_036136	chr15,chr15,chr15	-,-,+	RGMA,RGMA,MIR3175	-1638,-947,-185812
chr22:42097360-42098436	chr22	+	42097551	42098131	True	NM_001003796,NM_152513	chr22,chr22	-,+	NHP2L1,MEI1	-12638,-2084
chr1:28905155-28905620	chr1	+	28905170	28905594	True	NR_024127,NR_002987,NR_003077,NM_152304,NR_002976,NR_003035	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,-	SNHG12,SNORA61,SNORD99,RAB42,SNORA44,SNORA16A	2822,861,18,13117,1480,2021
chr1:47187800-47189708	chr1	+	47188096	47189442	True	NM_014774,NM_001145474	chr1,chr1	-,+	KIAA0494,C1orf223	-3360,-50647
chr22:42192491-42194300	chr22	+	42192513	42194309	True	NM_001003796,NM_024821	chr22,chr22	-,+	NHP2L1,CCDC134	-107600,2368
chr1:215741068-215742622	chr1	+	215741398	215742421	True	NM_206933,NM_016121	chr1,chr1	-,+	USH2A,KCTD3	854380,-718
chr17:43238949-43240366	chr17	+	43238968	43240398	True	NM_144608,NM_133373	chr17,chr17	+,-	HEXIM2,PLCD3	-757,-29077
chr12:4551266-4551768	chr12	+	4551295	4551807	True	NM_020996,NM_001130862	chr12,chr12	-,+	FGF6,RAD51AP1	3023,96142
chr14:99736541-99736842	chr14	+	99736541	99736886	True	NM_022898,NM_001099402,NM_138576	chr14,chr14,chr14	-,+,-	BCL11B,CCNK,BCL11B	986,210852,986
chr11:64647954-64649266	chr11	+	64648069	64649282	True	NM_006795,NM_006244,NR_029829,NR_029578	chr11,chr11,chr11,chr11	-,+,-,-	EHD1,PPP2R5B,MIR194-2,MIR192	-1878,42860,9686,9493
chr2:88756181-88757183	chr2	+	88756289	88756763	True	NM_152670,NM_001135649	chr2,chr2	+,-	C2orf51,FOXI3	67405,-4236
chr2:68717390-68719374	chr2	+	68717443	68719278	True	NM_173545,NM_001024680	chr2,chr2	+,-	APLF,FBXO48	-22809,-23053
chr4:52900420-52900838	chr4	+	52900537	52900895	True	NM_145263,NM_000232	chr4,chr4	+,-	SPATA18,SGCB	16697,3648
chr17:33905670-33905886	chr17	+	33905669	33905861	True	NR_003037,NM_001282,NM_001030006,NM_000286	chr17,chr17,chr17,chr17	+,+,+,-	SNORD7,AP2B1,AP2B1,PEX12	-5044,8420,8420,-13
chr20:23108788-23109589	chr20	+	23108880	23109576	True	NR_034149,NM_001052	chr20,chr20	-,+	LOC200261,SSTR4	3747,-92874
chr10:95257801-95259369	chr10	+	95257975	95259073	True	NM_001127182,NM_133337,NM_018131	chr10,chr10,chr10	+,-,+	CEP55,MYOF,CEP55	-1657,-15901,-1637
chr1:64056816-64058806	chr1	+	64057044	64058765	True	NM_001172819,NM_014288,NM_002633	chr1,chr1,chr1	+,-,+	PGM1,ITGB3BP,PGM1	714,-68209,181
chr20:42198440-42199090	chr20	+	42198446	42199084	True	NM_016276,NM_001199264,NM_001008901	chr20,chr20,chr20	+,+,-	SGK2,SGK2,GTSF1L	-3760,-4742,156608
chr19:10424451-10425699	chr19	+	10424991	10425381	True	NM_001031734,NM_001103167,NM_003259	chr19,chr19,chr19	-,-,+	FDX1L,ZGLP1,ICAM5	1360,-4758,-24401
chr11:62750607-62750975	chr11	+	62750839	62750909	True	NR_037193,NM_153278,NM_153277,NM_153276,NM_004790	chr11,chr11,chr11,chr11,chr11	+,-,-,-,-	SLC3A2,SLC22A6,SLC22A6,SLC22A6,SLC22A6	-101719,1610,1610,1610,1610
chr10:17221171-17222259	chr10	+	17221187	17222115	True	NM_003380,NM_004412	chr10,chr10	+,-	VIM,TRDMT1	48142,22011
chr2:40643124-40644740	chr2	+	40643232	40644524	True	NM_001112800,NM_152390	chr2,chr2	-,+	SLC8A1,TMEM178	12970,-750263
chr7:149469509-149469763	chr7	+	149469527	149469770	True	NM_207336,NM_198455	chr7,chr7	-,+	ZNF467,SSPO	575,3360
chr8:116681443-116682885	chr8	+	116681519	116682695	True	NM_014112,NM_032334	chr8,chr8	-,+	TRPS1,UTP23	-291,1096046
chr11:78274555-78275038	chr11	+	78274554	78274619	True	NM_024678,NM_020798	chr11,chr11	-,+	NARS2,USP35	11343,-374748
chr3:43751256-43751971	chr3	+	43751762	43752003	True	NM_001204834,NM_016006	chr3,chr3	-,+	ANO10,ABHD5	-88202,-19446
chr9:77642321-77642750	chr9	+	77642339	77642628	True	NM_012383,NM_152420	chr9,chr9	+,-	OSTF1,C9orf41	60769,733
chr6:84605818-84606801	chr6	+	84605850	84606160	True	NR_026669,NM_016230	chr6,chr6	-,+	SNAP91,CYB5R4	-186723,-36531
chr3:125580831-125581738	chr3	+	125581105	125581714	True	NR_024250,NR_031687	chr3,chr3	+,-	LOC100125556,MIR548I1	53729,-71710
chr2:219090870-219091243	chr2	+	219091023	219091099	True	NM_005731,NM_001087,NM_152862	chr2,chr2,chr2	+,-,+	ARPC2,AAMP,ARPC2	-8961,43848,-9207
chr14:77741912-77743022	chr14	+	77742031	77742989	True	NM_021257,NR_031661	chr14,chr14	-,+	NGB,MIR1260	-4376,-9521
chr11:45927851-45928430	chr11	+	45927987	45928455	True	NM_152312,NM_001080446	chr11,chr11	+,-	GYLTL1B,C11orf94	14740,428
chr19:8580234-8581281	chr19	+	8580341	8580985	True	NM_001146175,NM_032370,NM_031203	chr19,chr19,chr19	-,-,+	ZNF414,ZNF414,HNRNPM	-1293,-1293,-70589
chr10:79397416-79397617	chr10	+	79397445	79397611	True	NR_024585,NM_001014797,NM_001161353,NM_001161352,NM_002247	chr10,chr10,chr10,chr10,chr10	+,-,-,-,-	LOC100128292,KCNMA1,KCNMA1,KCNMA1,KCNMA1	288958,16,16,16,16
chr20:16723997-16725621	chr20	+	16724375	16725626	True	NM_001199866,NM_020157	chr20,chr20	-,+	KIF16B,OTOR	-170296,3376
chr4:68558237-68560201	chr4	+	68558385	68559574	True	NR_015439,NM_018227	chr4,chr4	+,-	LOC550112,UBA6	7421,7376
chr16:2568755-2569254	chr16	+	2569022	2569300	True	NM_001048212,NM_001198569,NM_015944,NM_001145815,NM_001694	chr16,chr16,chr16,chr16,chr16	-,+,+,+,+	CEMP1,ATP6V0C,AMDHD2,AMDHD2,ATP6V0C	12159,-5346,1062,1062,-5202
chr10:70886245-70886841	chr10	+	70886341	70886691	True	NM_001057,NM_001035260,NM_004896	chr10,chr10,chr10	-,+,+	TACR2,VPS26A,VPS26A	290038,-2494,-2494
chr17:70115329-70115637	chr17	+	70115390	70115681	True	NM_000346,NR_036488	chr17,chr17	+,-	SOX9,LOC100499467	1479,473319
chr16:66731245-66731714	chr16	+	66731275	66731485	True	NR_037619,NM_178818,NM_181521	chr16,chr16,chr16	+,-,-	CMTM3,CMTM4,CMTM4	-92692,-665,-665
chr1:180124899-180126791	chr1	+	180124978	180126749	True	NM_001004128,NR_037642,NM_002826	chr1,chr1,chr1	+,-,+	QSOX1,LOC100527964,QSOX1	-1061,117124,-1061
chr1:1343226-1343507	chr1	+	1343332	1343394	True	NM_001039577,NM_017971,NR_015434,NM_030937	chr1,chr1,chr1,chr1	-,-,+,-	CCNL2,MRPL20,LOC148413,CCNL2	-8614,-639,-8473,-8614
chr19:49778984-49780892	chr19	+	49779252	49780801	True	NM_001040031,NR_036209	chr19,chr19	+,-	CD37,MIR4324	57875,31374
chr4:122690248-122690610	chr4	+	122690334	122690650	True	NM_152399,NR_024365	chr4,chr4	-,+	TMEM155,LOC100192379	-3994,-4660
chr17:25666351-25666811	chr17	+	25666352	25666772	True	NM_000625,NM_134265	chr17,chr17	-,+	NOS2,WSB1	460833,-45310
chr1:111772226-111772611	chr1	+	111772356	111772656	True	NM_001025199,NM_004000,NM_024901,NM_001025197	chr1,chr1,chr1,chr1	+,+,-,+	CHI3L2,CHI3L2,DENND2D,CHI3L2	-74,-2126,-29075,-2126
chr19:46297666-46298723	chr19	+	46297967	46298357	True	NM_004943,NM_004497	chr19,chr19	-,+	DMWD,FOXA3	-1907,69160
chr2:74406133-74406521	chr2	+	74406187	74406367	True	NM_018221,NM_006636	chr2,chr2	-,+	MOBKL1B,MTHFD2	-192,19322
chr6:47276731-47276946	chr6	+	47276848	47276940	True	NM_012120,NM_014452	chr6,chr6	+,-	CD2AP,TNFRSF21	168584,790
chr5:68468333-68468691	chr5	+	68468383	68468516	True	NM_176816,NM_031966	chr5,chr5	-,+	CCDC125,CCNB1	147945,-5528
chr17:71641735-71641978	chr17	+	71641887	71642013	True	NM_001144952,NM_017941	chr17,chr17	-,+	SDK2,C17orf80	-1660,-413162
chr4:108752510-108753150	chr4	+	108752622	108753097	True	NM_001136258,NM_005443	chr4,chr4	+,-	SGMS2,PAPSS1	-6961,-111203
chr8:4851532-4851739	chr8	+	4851531	4851629	True	NM_033225,NM_001172574	chr8,chr8	-,+	CSMD1,MCPH1	749,1412483
chr11:111742138-111742719	chr11	+	111742220	111742768	True	NM_138378,NM_001077690,NM_001077691,NM_024740,NM_022761,NM_001077692	chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,+,-	FDXACB1,ALG9,ALG9,ALG9,C11orf1,ALG9	7435,27,-216,27,7179,-216
chr12:53473544-53474524	chr12	+	53473600	53474500	True	NM_002178,NM_032840	chr12,chr12	+,-	IGFBP6,SPRYD3	16935,-396
chr1:181056541-181057418	chr1	+	181056601	181057192	True	NM_016545,NM_005819	chr1,chr1	+,-	IER5,STX6	445,-64555
chrX:70985826-70986113	chrX	+	70985873	70986135	True	NR_001568,NM_001145140,NM_001145139	chrX,chrX,chrX	-,+,+	BCYRN1,CXorf49,CXorf49B	-36911,-2784,-2784
chrX:70985826-70986113	chrX	-	70935139	70935401	False	NR_034005,NM_001145140,NM_001145139	chrX,chrX,chrX	+,-,-	FLJ46446,CXorf49,CXorf49B	-18144,2784,2784
chr22:22595478-22596509	chr22	+	22596021	22596495	True	NM_007128,NM_003935	chr22,chr22	+,-	VPREB1,TOP3B	2704,-258874
chr14:95942825-95943453	chr14	+	95942949	95943157	True	NM_016417,NM_152592	chr14,chr14	+,-	GLRX5,C14orf49	58165,-776
chr9:40792288-40793171	chr9	+	40792306	40792938	True	NR_026801,NM_033160	chr9,chr9	+,-	FAM74A3,ZNF658	-76833,-194
chr9:40792288-40793171	chr9	+	39464823	39465344	False	NM_001040065,NR_003528	chr9,chr9	+,-	FAM75A2,LOC653501	-109181,-297
chr9:40792288-40793171	chr9	+	41609841	41610363	False	NM_001113541,NR_003528	chr9,chr9	+,-	FAM75A5,LOC653501	-109219,-297
chr1:152783487-152784852	chr1	+	152783495	152784779	True	NM_178351,NM_178349	chr1,chr1	-,+	LCE1C,LCE1B	-4388,-173
chr2:103237470-103238430	chr2	+	103238028	103238469	True	NM_003048,NM_032718	chr2,chr2	+,-	SLC9A2,MFSD9	-1922,114925
chr5:89913678-89915590	chr5	+	89913691	89915218	True	NM_198273,NR_003149	chr5,chr5	-,+	LYSMD3,GPR98	-88290,-59137
chr11:63663859-63664108	chr11	+	63663863	63664123	True	NM_017490,NM_173587	chr11,chr11	+,-	MARK2,RCOR2	-7927,20243
chr3:169486916-169487233	chr3	+	169487095	169487281	True	NR_001566,NM_001185118,NM_018657,NR_033702,NM_032487,NR_033703,NM_001185119	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,+,+,-,+,+	TERC,MYNN,MYNN,MYNN,ARPM1,MYNN,MYNN	-4247,3571,3571,3571,452,3571,4771
chr16:2835033-2835341	chr16	+	2835077	2835289	True	NM_152891,NM_001135086,NM_007108,NM_207013	chr16,chr16,chr16,chr16	-,+,-,-	PRSS33,PRSS41,TCEB2,TCEB2	1469,13196,-7780,-7780
chr9:92255725-92255948	chr9	+	92255751	92255967	True	NR_024280,NM_006378	chr9,chr9	+,-	LOC100129066,SEMA4D	-1104,-161140
chr8:19805274-19805774	chr8	+	19805294	19805814	True	NM_001135691,NM_000237	chr8,chr8	-,+	SLC18A1,LPL	234953,-8763
chr17:685913-686221	chr17	+	685924	686096	True	NM_018146,NM_016080	chr17,chr17	+,-	RNMTL1,GLOD4	-462,-353
chr18:24764520-24764739	chr18	+	24764564	24764720	True	NR_026908,NM_031422	chr18,chr18	+,-	C18orf16,CHST9	-319343,619
chr22:19132140-19132658	chr22	+	19132210	19132472	True	NM_005315,NM_053006,NM_022719	chr22,chr22,chr22	-,+,-	GSC2,TSSK2,DGCR14	5374,-13940,-20
chr4:113232857-113233520	chr4	+	113232859	113233218	True	NM_052864,NM_025144	chr4,chr4	-,+	TIFA,ALPK1	-25800,-14411
chr1:205897407-205898011	chr1	+	205897414	205898008	True	NM_052934,NM_001123168	chr1,chr1	-,+	SLC26A9,FAM72A	14630,240902
chr6:111301254-111301780	chr6	+	111301351	111301799	True	NM_032194,NR_002932	chr6,chr6	+,-	RPF2,GSTM2P1	1491,67008
chrX:2883465-2883864	chrX	+	2883612	2883672	True	NM_000047,NM_001011719	chrX,chrX	-,+	ARSE,ARSH	-1118,40981
chrX:128661924-128662978	chrX	+	128662032	128663022	True	NM_003069,NM_000276,NM_139035	chrX,chrX,chrX	-,+,-	SMARCA1,OCRL,SMARCA1	-4572,11229,-4572
chrX:97848559-97848857	chrX	+	97848620	97848885	True	NR_024608,NM_013347	chrX,chrX	-,+	LOC442459,RPA4	1346007,-1709775
chr9:136399922-136400229	chr9	+	136400001	136400263	True	NM_014694,NM_001080483,NM_001145320	chr9,chr9,chr9	+,-,+	ADAMTSL2,TMEM8C,ADAMTSL2	-77,-9933,-2766
chr5:112822394-112822936	chr5	+	112822647	112822993	True	NM_001085377,NM_022828	chr5,chr5	-,+	MCC,YTHDC2	1592,26397
chrY:20927496-20928921	chrY	+	20927540	20928959	True	NM_033108,NR_002159,NM_152584,NR_003509,NM_001001877,NR_003510,NM_153716	chrY,chrY,chrY,chrY,chrY,chrY,chrY	-,+,-,-,-,-,-	HSFY1,TTTY9B,HSFY1,HSFY2,HSFY2,HSFY1,HSFY2	6695,-35823,6692,6712,6692,6692,6712
chrY:20927496-20928921	chrY	-	20715214	20716633	False	NM_033108,NM_152584,NR_003509,NR_001530,NM_001001877,NR_003510,NM_153716	chrY,chrY,chrY,chrY,chrY,chrY,chrY	+,+,+,-,+,+,+	HSFY1,HSFY1,HSFY2,TTTY9A,HSFY2,HSFY1,HSFY2	-6691,-6688,-6708,35824,-6688,-6688,-6708
chr13:106123430-106124412	chr13	+	106123606	106124341	True	NM_001161814,NM_004093,NM_001161812,NM_172370	chr13,chr13,chr13,chr13	+,-,+,+	DAOA,EFNB2,DAOA,DAOA	-5451,1063106,-5102,-5303
chr10:50596975-50598858	chr10	+	50596995	50598872	True	NM_001080520,NM_199459	chr10,chr10	-,+	DRGX,C10orf71	1086,-89859
chr6:38608214-38608620	chr6	+	38608256	38608664	True	NM_052893,NM_001099272,NM_001371	chr6,chr6,chr6	-,-,+	BTBD9,BTBD9,DNAH8	-332,-332,81887
chr6:16129166-16129415	chr6	+	16129277	16129343	True	NM_013262,NR_036448	chr6,chr6	+,-	MYLIP,DTNBP1	-11,-465988
chr17:78519014-78520675	chr17	+	78519256	78520225	True	NM_002522,NM_020761,NM_001163034	chr17,chr17,chr17	-,+,+	NPTX1,RPTOR,RPTOR	-68852,-682,-682
chr1:48902549-48904075	chr1	+	48902774	48904103	True	NM_001135181,NM_019073	chr1,chr1	+,-	SLC5A9,SPATA6	-214470,33823
chr10:38645146-38645404	chr10	+	38645209	38645409	True	NR_027269,NR_003086	chr10,chr10	-,+	SEPT7L,HSD17B7P2	46421,-28
chr10:38645146-38645404	chr1	+	162760417	162760607	False	NM_178550,NM_016371	chr1,chr1	-,+	C1orf110,HSD17B7	78048,28
chr5:159624566-159624845	chr5	+	159624572	159624798	True	NM_001130864,NM_001040442	chr5,chr5	-,+	PWWP2A,FABP6	-78120,1249
chr11:197595-198265	chr11	+	197727	198249	True	NM_053280,NM_001097610,NM_145651,NM_001098787,NM_016526	chr11,chr11,chr11,chr11,chr11	+,+,+,-,-	ODF3,LOC653486,SCGB1C1,BET1L,BET1L	-1017,-4698,-4698,9223,9223
chr1:15272924-15273456	chr1	+	15273068	15273368	True	NM_001017999,NR_027136	chr1,chr1	+,-	KAZN,C1orf126	-706,205642
chr4:71856126-71857933	chr4	+	71856289	71857972	True	NM_002092,NM_000788	chr4,chr4	-,+	GRSF1,DCK	-150662,1292
chr11:94801150-94801819	chr11	+	94801222	94801650	True	NM_032102,NM_016403	chr11,chr11	+,-	SRSF8,CWC15	-1218,-94446
chr17:40936062-40936336	chr17	+	40936061	40936299	True	NM_032387,NM_001040431	chr17,chr17	+,-	WNK4,CCDC56	-3463,14455
chr9:134310607-134311674	chr9	+	134311064	134311581	True	NM_001135954,NM_013318	chr9,chr9	-,+	UCK1,PRRC2B	95142,-5648
chr19:17904596-17905604	chr19	+	17904596	17905616	True	NM_014256,NM_005543	chr19,chr19	+,-	B3GNT3,INSL3	302,26754
chr16:2838193-2838620	chr16	+	2838211	2838301	True	NM_152891,NM_001135086	chr16,chr16	-,+	PRSS33,PRSS41	-1503,10184
chr2:97172927-97173497	chr2	+	97172954	97173544	True	NM_212481,NR_026875	chr2,chr2	+,-	ARID5A,NEURL3	28919,352
chr3:63807742-63809567	chr3	+	63808089	63809451	True	NR_026866,NM_025075	chr3,chr3	+,-	C3orf49,THOC7	-3107,40197
chr9:140064683-140065123	chr9	+	140064733	140065091	True	NM_001013653,NR_037416,NM_003731	chr9,chr9,chr9	-,-,+	LRRC26,MIR3621,SSNA1	-242,-1011,17962
chr1:202091354-202091931	chr1	+	202091548	202091892	True	NM_004767,NM_138795	chr1,chr1	+,-	GPR37L1,ARL8A	136,22024
chr6:87647697-87647937	chr6	+	87647705	87647881	True	NM_000735,NM_000865	chr6,chr6	-,+	CGA,HTR1E	156993,-734
chr18:11694937-11696426	chr18	+	11694987	11696101	True	NM_023075,NM_182978	chr18,chr18	-,+	MPPE1,GNAL	212596,-5905
chr6:168479018-168479499	chr6	+	168479023	168479183	True	NM_030615,NM_001122841,NM_024919	chr6,chr6,chr6	+,-,-	KIF25,FRMD1,FRMD1	-60528,-2491,706
chr1:240763746-240764927	chr1	+	240764117	240764868	True	NM_022469,NM_020066	chr1,chr1	-,+	GREM2,FMN2	10651,-508983
chr11:67212224-67212605	chr11	+	67212301	67212653	True	NM_020441,NM_145200,NM_206997,NM_001018070,NM_005608	chr11,chr11,chr11,chr11,chr11	-,+,-,-,-	CORO1B,CABP4,GPR152,CORO1B,PTPRCAP	-1318,10164,7597,-1038,-7148
chr17:51900312-51901776	chr17	+	51900472	51901738	True	NM_032559,NR_027941	chr17,chr17	+,-	KIF2B,COX11	-284,1144376
chr3:9695402-9697235	chr3	+	9695438	9696695	True	NM_001077526,NM_198560,NM_022485,NM_001077525	chr3,chr3,chr3,chr3	+,-,+,+	MTMR14,LHFPL4,MTMR14,MTMR14	-4372,-99952,-4372,-4372
chr19:7810764-7811456	chr19	+	7810893	7811393	True	NM_021155,NM_001144893,NM_001144897,NM_001144896,NM_001144895,NM_001144894,NR_026692,NM_001144899,NM_001144904	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,-,+	CD209,CD209,CD209,CD209,CD209,CD209,CD209,CD209,CLEC4M	1121,1121,1121,1121,1121,1121,1121,1121,16641
chr9:70341097-70342694	chr9	+	70341217	70341267	True	NM_201453,NM_001099279	chr9,chr9	+,-	CBWD3,FOXD4L2	515571,88514
chr9:70341097-70342694	chr9	-	42805354	42805404	False	NR_026759,NR_026558	chr9,chr9	-,+	FAM95B1,AQP7P3	227958,52747
chr1:162372230-162372789	chr1	+	162372332	162372691	True	NM_001085375,NM_053282	chr1,chr1	+,-	C1orf226,SH2D1B	-20863,9298
chr1:51433244-51433741	chr1	+	51433267	51433758	True	NM_001262,NM_007051,NM_078626	chr1,chr1,chr1	+,-,+	CDKN2C,FAF1,CDKN2C	608,-7331,1883
chr7:100449334-100449829	chr7	+	100449516	100449878	True	NM_020246,NM_004444	chr7,chr7	+,-	SLC12A9,EPHB4	479,-24373
chr5:141704510-141705013	chr5	+	141704543	141704805	True	NM_030571,NM_001127496,NM_030964	chr5,chr5,chr5	+,-,-	NDFIP1,SPRY4,SPRY4	-216270,-3,-3
chr3:128969925-128970356	chr3	+	128970112	128970194	True	NM_006026,NM_016128	chr3,chr3	-,+	H1FX,COPG	64988,-1717
chr2:26538601-26539165	chr2	+	26538635	26539145	True	NM_001145168,NM_001145169,NM_033505	chr2,chr2,chr2	-,-,+	GPR113,GPR113,EPT1	2822,2875,29808
chr19:4967405-4967794	chr19	+	4967430	4967842	True	NM_015015,NM_001080523	chr19,chr19	+,-	KDM4B,ARRDC5	1281,-64551
chr3:141725992-141726930	chr3	+	141726147	141726935	True	NM_001178140,NM_001679	chr3,chr3	-,+	TFDP2,ATP1B3	-6918,-130729
chr2:102955194-102956792	chr2	+	102955333	102956725	True	NM_032718,NM_003856	chr2,chr2	-,+	MFSD9,IL1RL1	396662,-1674
chr17:48129167-48130690	chr17	+	48129260	48130464	True	NM_005220,NM_002204,NM_005501	chr17,chr17,chr17	-,+,+	DLX3,ITGA3,ITGA3	-56672,2875,2875
chr6:109704348-109705177	chr6	+	109704347	109705146	True	NM_001142404,NM_001142402,NM_001142403,NM_001142401,NM_006016,NM_003080	chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,-,-,+	CD164,CD164,CD164,CD164,CD164,SMPD2	-585,-585,-585,-585,-585,56784
chr3:133614850-133615401	chr3	+	133614981	133615381	True	NM_021203,NM_016577	chr3,chr3	+,-	SRPRB,RAB6B	-112155,-290
chr9:139744812-139745150	chr9	+	139744825	139745199	True	NM_003792,NM_206920,NM_014172,NM_001080482,NM_001135861	chr9,chr9,chr9,chr9,chr9	-,+,+,+,+	EDF1,MAMDC4,PHPT1,C9orf172,PHPT1	15589,1619,-1620,-6009,-1620
chr9:124508492-124509138	chr9	+	124508546	124509066	True	NR_003191,NM_138709	chr9,chr9	-,+	GGTA1,DAB2IP	-246240,-3533
chr20:50805437-50806136	chr20	+	50805527	50806016	True	NM_173485,NM_018197,NM_199426,NM_022088,NM_199427	chr20,chr20,chr20,chr20,chr20	+,-,-,-,-	TSHZ2,ZFP64,ZFP64,ZFP64,ZFP64	782929,2562,2562,2562,2562
chr12:12488433-12488832	chr12	+	12488784	12488844	True	NM_058169,NM_018050	chr12,chr12	+,-	LOH12CR1,MANSC1	21175,14375
chr19:40477496-40478078	chr19	+	40477585	40478025	True	NM_153001,NM_003890,NM_006503	chr19,chr19,chr19	+,-,+	PSMC4,FCGBP,PSMC4	-570,-37052,-570
chr11:9116158-9116973	chr11	+	9116427	9116979	True	NM_020974,NM_001170690,NR_027713	chr11,chr11,chr11	-,-,+	SCUBE2,SCUBE2,KRT8P41	-3277,-3277,-568
chr17:28654536-28655904	chr17	+	28654809	28655397	True	NM_206832,NM_001304	chr17,chr17	-,+	TMIGD1,CPD	5720,50544
chr1:156784150-156784830	chr1	+	156784228	156784856	True	NM_003975,NM_001007792,NM_001161441,NM_001161443,NM_001161442,NM_001161444	chr1,chr1,chr1,chr1,chr1,chr1	-,+,-,-,-,-	SH2D2A,NTRK1,SH2D2A,SH2D2A,SH2D2A,SH2D2A	1834,685,1834,1133,1834,1834
chr1:40974213-40974468	chr1	+	40974217	40974483	True	NM_022774,NM_014747	chr1,chr1	+,-	DEM1,RIMS3	-51,156891
chr11:118766201-118766580	chr11	+	118766325	118766559	True	NM_182557,NM_032966	chr11,chr11	-,+	BCL9L,CXCR5	15104,-2275
chr9:116223941-116224563	chr9	+	116223969	116224559	True	NM_017443,NM_017790	chr9,chr9	-,+	POLE3,RGS3	-50940,1449
chr16:3307198-3308116	chr16	+	3307201	3308167	True	NR_033904,NM_001198536,NM_000243	chr16,chr16,chr16	+,-,-	FLJ39639,MEFV,MEFV	5600,-574,-574
chr1:149276705-149277583	chr1	+	149277199	149277609	True	NM_001024599,NR_027002	chr1,chr1	-,+	HIST2H2BF,LOC388692	121673,1866
chr1:149276705-149277583	chr1	+	149662770	149663180	False	NM_001161334,NR_024510	chr1,chr1	-,+	HIST2H2BF,LOC728855	120801,-86368
chr4:100007110-100007815	chr4	+	100007420	100007728	True	NM_000671,NR_037884	chr4,chr4	-,+	ADH5,LOC100507053	2253,2279
chrX:134230245-134231754	chrX	+	134230386	134231696	True	NR_024493,NM_001078171	chrX,chrX	-,+	NCRNA00087,FAM127A	1087,-64104
chr22:47156950-47157746	chr22	+	47156952	47157539	True	NM_022766,NM_014346	chr22,chr22	-,+	CERK,TBC1D22A	-22800,978
chr7:24613733-24614182	chr7	+	24613773	24614137	True	NM_016447,NM_001127453	chr7,chr7	+,-	MPP6,DFNA5	-739,182998
chr2:85202245-85203603	chr2	+	85202428	85203165	True	NM_020122,NM_001080824	chr2,chr2	+,-	KCMF1,C2orf89	-4251,-94176
chr19:3787464-3788990	chr19	+	3787672	3788208	True	NM_139354,NM_139355,NM_172251	chr19,chr19,chr19	-,-,+	MATK,MATK,MRPL54	-1257,-1257,-25058
chr15:44714946-44715792	chr15	+	44715277	44715744	True	NR_034171,NM_016396	chr15,chr15	-,+	LOC645212,CTDSPL2	113413,3834
chr12:57412059-57413998	chr12	+	57412360	57413935	True	NR_033654,NM_007264,NM_013251,NM_001178054	chr12,chr12,chr12,chr12	-,+,-,-	TAC3,GPR182,TAC3,TAC3	-2016,-24060,-2016,-2016
chr21:34397731-34398004	chr21	+	34397733	34398043	True	NR_024102,NM_005806	chr21,chr21	-,+	C21orf54,OLIG2	144548,195
chr7:141402187-141403464	chr7	+	141402298	141403308	True	NM_001080392,NM_001105558	chr7,chr7	-,+	KIAA1147,WEE2	-345,4844
chr11:106887746-106888325	chr11	+	106887781	106888138	True	NM_001130037,NM_000855	chr11,chr11	+,-	ELMOD1,GUCY1A2	573678,1083
chr11:69925658-69926095	chr11	+	69925714	69926128	True	NM_005247,NM_018043,NR_030691	chr11,chr11,chr11	-,+,+	FGF3,ANO1,ANO1	-291522,-1357,5387
chr1:4483121-4484529	chr1	+	4483467	4484361	True	NR_027088,NM_207356	chr1,chr1	+,-	LOC284661,C1orf174	-11408,-666610
chr15:73975550-73975876	chr15	+	73975683	73975843	True	NM_025240,NM_001024736,NM_017455	chr15,chr15,chr15	+,+,-	CD276,CD276,NPTN	778,778,-49930
chr22:42389945-42390715	chr22	+	42389953	42390703	True	NM_152613,NM_024053	chr22,chr22	+,-	WBP2NL,CENPM	4025,-46805
chr1:1849496-1849794	chr1	+	1849562	1849838	True	NM_138705,NM_178545	chr1,chr1	+,-	CALML6,TMEM52	-3347,952
chr7:135242646-135243508	chr7	+	135242674	135243555	True	NM_015135,NM_001190848	chr7,chr7	+,-	NUP205,CNOT4	-63,-47799
chr1:186649345-186649690	chr1	+	186649514	186649642	True	NM_024420,NM_000963	chr1,chr1	+,-	PLA2G4A,PTGS2	148389,27
chr7:29875481-29876691	chr7	+	29875614	29876074	True	NM_001080529,NR_027347	chr7,chr7	+,-	WIPF3,LOC100271874	-1324,-150177
chr5:169759038-169759475	chr5	+	169759048	169759494	True	NR_026945,NM_005565	chr5,chr5	+,-	LOC257358,LCP2	-664,-34226
chr15:52405417-52405836	chr15	+	52405448	52405758	True	NM_002748,NM_020396	chr15,chr15	+,-	MAPK6,BCL2L10	-94088,-476
chr19:55393259-55393628	chr19	+	55393345	55393635	True	NM_002000,NM_001127255,NM_133279,NM_133278,NM_133269,NM_133274,NM_133277,NM_133271,NM_133273,NM_133272	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+,+,+,+,+	FCAR,NLRP7,FCAR,FCAR,FCAR,FCAR,FCAR,FCAR,FCAR,FCAR	-7848,65288,-7848,-7848,-7848,-7848,-7848,-7848,-7848,-7848
chr9:116168711-116170295	chr9	+	116169366	116170336	True	NR_027261,NM_017443,NM_152786,NM_000031	chr9,chr9,chr9,chr9	-,-,+,-	POLE3,POLE3,C9orf43,ALAD	2669,2743,2685,-5748
chr15:90319365-90319582	chr15	+	90319447	90319629	True	NM_001039958,NM_018670	chr15,chr15	+,-	MESP2,MESP1	17,-24907
chr19:13873959-13874266	chr19	+	13874015	13874283	True	NR_036515,NM_001031727,NM_032285	chr19,chr19,chr19	-,+,+	LOC284454,MRI1,MRI1	72870,1053,1053
chr8:93005412-93006074	chr8	+	93005418	93005708	True	NM_175636,NM_052832	chr8,chr8	-,+	RUNX1T1,SLC26A7	24250,-743953
chr16:31366375-31367105	chr16	+	31366559	31367023	True	NM_000887,NM_005205	chr16,chr16	+,-	ITGAX,COX6A2	-101,72776
chr15:78633325-78633785	chr15	+	78633401	78633523	True	NM_004378,NM_025234	chr15,chr15	+,-	CRABP1,WDR61	-786,-41461
chr4:3443767-3444399	chr4	+	3443846	3444356	True	NM_002337,NM_001528	chr4,chr4	-,+	LRPAP1,HGFAC	89918,-171
chr11:68672635-68673205	chr11	+	68672689	68673205	True	NM_181515,NM_181514,NM_002180	chr11,chr11,chr11	-,-,+	MRPL21,MRPL21,IGHMBP2	-1386,-1386,-1421
chr22:22873698-22874535	chr22	+	22873803	22874487	True	NM_080740,NR_027426	chr22,chr22	-,+	ZNF280A,LOC648691	176,27268
chr9:21025981-21027853	chr9	+	21026081	21027677	True	NR_030166,NM_001010915	chr9,chr9	+,-	MIR491,PTPLAD2	-310028,4008
chr15:74503900-74504838	chr15	+	74504316	74504830	True	NM_022369,NM_001199042,NM_001199040,NM_001199041,NM_001142619,NM_001142618,NM_001142617,NM_001142620,NM_025055	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,-,-,-,-,-,-,+	STRA6,STRA6,STRA6,STRA6,STRA6,STRA6,STRA6,STRA6,CCDC33	-9096,-9096,-2270,-3921,-2945,-8760,-2945,-2945,23836
chr12:12870192-12870423	chr12	+	12870247	12870447	True	NM_004064,NM_006143,NM_001130415	chr12,chr12,chr12	+,-,+	CDKN1B,GPR19,APOLD1	-3,-21126,8403
chr12:50559960-50560631	chr12	+	50560133	50560444	True	NM_032901,NM_147190	chr12,chr12	+,-	C12orf62,LASS5	-54285,710
chr6:5086640-5086988	chr6	+	5086662	5087016	True	NM_001145115,NR_037462	chr6,chr6	+,-	PPP1R3G,MIR3691	-993,61590
chr12:78265814-78267684	chr12	+	78266016	78266895	True	NM_203394,NM_014903	chr12,chr12	-,+	E2F7,NAV3	-806656,-41005
chrX:125299031-125299407	chrX	+	125299079	125299445	True	NM_001013628,NM_001122716	chrX,chrX	-,+	DCAF12L2,CXorf64	685,654301
chrX:125299031-125299407	chrX	+	125686079	125686129	False	NM_001122716,NM_178470	chrX,chrX	+,-	CXorf64,DCAF12L1	267617,763
chrX:84583369-84584418	chrX	+	84583634	84584463	True	NM_021998,NM_024921	chrX,chrX	+,-	ZNF711,POF1B	-84689,50342
chr6:37214426-37214723	chr6	+	37214711	37214771	True	NM_145316,NM_017772	chr6,chr6	-,+	TMEM217,TBC1D22B	10692,10776
chr14:104093765-104094312	chr14	+	104094005	104094286	True	NM_005552,NM_182923,NM_001130107,NM_001015048	chr14,chr14,chr14,chr14	+,+,+,-	KLC1,KLC1,KLC1,BAG5	1238,1238,1238,-64854
chr16:72039553-72041493	chr16	+	72039618	72041450	True	NM_001361,NM_181536	chr16,chr16	+,-	DHODH,PKD1L3	1192,-5741
chr16:21665659-21666789	chr16	+	21665876	21666735	True	NM_144672,NM_005849	chr16,chr16	+,-	OTOA,IGSF6	23099,-1904
chr13:32883286-32883580	chr13	+	32883418	32883628	True	NM_000059,NM_001136571	chr13,chr13	+,-	BRCA2,ZAR1L	5988,2517
chr7:72972407-72972851	chr7	+	72972446	72972757	True	NM_001077621,NR_036682,NM_001707,NM_001197244	chr7,chr7,chr7,chr7	+,-,-,-	VPS37D,BCL7B,BCL7B,BCL7B	109416,-844,-381,-381
chr20:61340655-61340974	chr20	+	61340660	61340954	True	NM_002531,NR_024470	chr20,chr20	+,-	NTSR1,LOC100127888	-522,-42687
chr4:21546215-21547179	chr4	+	21546251	21546720	True	NM_001035004,NM_145048	chr4,chr4	-,+	KCNIP4,PACRGL	0,-844266
chr7:97909066-97909466	chr7	+	97909149	97909243	True	NM_001159491,NM_015395,NM_015379	chr7,chr7,chr7	+,-,+	BRI3,TECPR1,BRI3	1735,-27681,1735
chrX:65414304-65414949	chrX	+	65414341	65414635	True	NM_014799,NM_007268	chrX,chrX	+,-	HEPH,VSIG4	-30291,-154374
chr2:207081271-207081832	chr2	+	207081307	207081882	True	NM_001098199,NM_005279,NR_002590	chr2,chr2,chr2	-,-,+	GPR1,GPR1,SNORA41	946,946,-54406
chr7:62764350-62765059	chr7	+	62764466	62764880	True	NR_028348,NR_003952	chr7,chr7	+,-	LOC100287704,LOC643955	44567,-32
chr7:62764350-62765059	chr7	-	62904065	62904479	False	NR_028349	chr7	-	LOC100287834	-44646
chr6:44266362-44267875	chr6	+	44266380	44267612	True	NM_001137560,NM_182539	chr6,chr6	+,-	TMEM151B,TCTE1	-27951,-922
chr3:146216628-146217976	chr3	+	146216627	146217913	True	NM_003412,NM_001199979	chr3,chr3	+,-	ZIC1,PLSCR2	909267,-2849
chr15:35281850-35282578	chr15	+	35281861	35282424	True	NM_014106,NR_003144	chr15,chr15	-,+	ZNF770,LOC723972	-1364,247102
chr3:194405964-194406439	chr3	+	194406022	194406447	True	NM_018385,NM_153690	chr3,chr3	-,+	LSG1,FAM43A	-12816,174
chr13:25559642-25561098	chr13	+	25560040	25561072	True	NR_026730,NM_030979	chr13,chr13	-,+	TPTE2P1,PABPC3	-17433,109203
chr9:117849043-117849278	chr9	+	117849107	117849327	True	NM_017418,NM_002160	chr9,chr9	+,-	DEC1,TNC	54769,31209
chr19:38716611-38716955	chr19	+	38716614	38716868	True	NM_001135156,NM_004647,NM_001135155,NM_001166103	chr19,chr19,chr19,chr19	-,-,-,+	DPF1,DPF1,DPF1,SPINT2	3499,-1724,-1724,38229
chr1:153939572-153939824	chr1	+	153939571	153939863	True	NM_014437,NM_130898,NM_181715	chr1,chr1,chr1	-,+,-	SLC39A1,CREB3L4,CRTC2	375,533,-8439
chr3:156045357-156046452	chr3	+	156045368	156046487	True	NM_007107,NM_172159	chr3,chr3	-,+	SSR3,KCNAB1	226537,-36656
chr2:85839316-85839676	chr2	+	85839356	85839610	True	NR_033179,NM_006590,NM_001013649,NM_001031738	chr2,chr2,chr2,chr2	-,+,-,-	TMEM150A,USP39,C2orf68,TMEM150A	-9534,3672,-177,-9534
chr2:50572692-50572942	chr2	+	50572784	50572942	True	NM_138735,NM_006872	chr2,chr2	-,+	NRXN1,GTF2A1L	2002,-1727898
chr14:73525792-73526167	chr14	+	73525837	73526211	True	NM_021239,NM_021260	chr14,chr14	+,-	RBM25,ZFYVE1	-667,-31917
chr4:172759498-172760124	chr4	+	172759779	172760164	True	NR_036751,NM_001034845	chr4,chr4	-,+	HSP90AA6P,GALNTL6	-1233644,-25266
chr19:54496187-54496456	chr19	+	54496284	54496430	True	NM_145814,NM_145815,NM_198481,NM_031897	chr19,chr19,chr19,chr19	+,+,-,+	CACNG6,CACNG6,VSTM1,CACNG6	-793,-793,70827,-793
chr7:99868262-99868623	chr7	+	99868290	99868557	True	NR_028040,NM_001004351,NR_028039,NR_028038,NM_178831	chr7,chr7,chr7,chr7,chr7	-,+,-,-,-	GATS,SPDYE3,GATS,GATS,GATS	1348,36767,1348,1348,1348
chr11:64938457-64938665	chr11	+	64938459	64938639	True	NM_001008778,NM_172230	chr11,chr11	+,-	SPDYC,SYVN1	-806,-36456
chr6:47680957-47682264	chr6	+	47681033	47682309	True	NM_153838,NM_001013732	chr6,chr6	+,-	GPR115,C6orf138	-14795,354166
chr22:24823294-24823820	chr22	+	24823446	24823532	True	NR_028484,NM_000675	chr22,chr22	-,+	C22orf45,ADORA2A	67301,3
chr13:36052836-36053073	chr13	+	36052939	36053078	True	NM_001204197,NM_005584	chr13,chr13	+,-	NBEA,MAB21L1	-2104,-2107
chrX:140671558-140672074	chrX	+	140671818	140671992	True	NM_013453,NM_145662	chrX,chrX	-,-	SPANXA1,SPANXA2	894,918
chrX:140671558-140672074	chrX	+	140335608	140335697	False	NM_022661,NM_145664	chrX,chrX	-,+	SPANXC,SPANXB2	1006,-238908
chrX:140671558-140672074	chrX	+	140785590	140785669	False	NM_032417,NM_013453,NM_145665	chrX,chrX,chrX	-,+,-	SPANXD,SPANXA1,SPANXE	986,-107791,1043
chrX:140671558-140672074	chrX	-	140678702	140678876	False	NM_013453,NM_145662	chrX,chrX	+,+	SPANXA1,SPANXA2	-894,-918
chr15:72669045-72669341	chr15	+	72669132	72669389	True	NR_027262,NM_000520	chr15,chr15	+,-	C15orf34,HEXA	-736,-612
chr1:144992366-144993044	chr1	+	144992569	144993043	True	NM_014644,NM_001195260,NM_001195261,NM_004892,NM_001002812,NM_001002810,NM_001198834	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,-,-	PDE4DIP,PDE4DIP,PDE4DIP,SEC22B,PDE4DIP,PDE4DIP,PDE4DIP	2029,4118,2089,103363,2029,2040,2040
chr9:139701931-139702214	chr9	+	139702038	139702210	True	NM_024718,NM_001173989,NM_001173988,NR_024580	chr9,chr9,chr9,chr9	+,+,+,-	C9orf86,C9orf86,C9orf86,LOC100131193	163,163,163,1140
chr2:26382175-26383548	chr2	+	26382458	26383500	True	NM_000182,NM_001168241	chr2,chr2	-,+	HADHA,FAM59B	84144,12459
chr4:68380232-68380903	chr4	+	68380237	68380750	True	NM_001812,NM_012108	chr4,chr4	-,+	CENPC1,STAP1	30571,43695
chr4:53729444-53730952	chr4	+	53729569	53730982	True	NM_022832,NM_023940	chr4,chr4	-,+	USP46,RASL11B	-204067,-1125
chr13:39569216-39570048	chr13	+	39569524	39569733	True	NM_001012754,NM_001144033,NM_145286	chr13,chr13,chr13	+,-,-	NHLRC3,STOML3,STOML3	42721,-4528,-4528
chr12:53694193-53694862	chr12	+	53694322	53694682	True	NM_021640,NM_002624,NM_001173466,NM_145897	chr12,chr12,chr12,chr12	+,+,-,+	C12orf10,PFDN5,AAAS,PFDN5	-904,-5139,20784,-5139
chr16:67196460-67196855	chr16	+	67196468	67196846	True	NM_001040667,NM_001538,NM_003789,NM_018378,NM_001185058	chr16,chr16,chr16,chr16,chr16	+,+,-,+,+	HSF4,HSF4,TRADD,FBXL8,NOL3	441,441,-2656,-2628,7558
chr19:41354104-41354528	chr19	+	41354133	41354209	True	NM_000762,NM_053046	chr19,chr19	-,+	CYP2A6,EGLN2	2193,-48850
chr14:23070921-23071386	chr14	+	23070997	23071327	True	NM_022060,NM_001344	chr14,chr14	+,-	ABHD4,DAD1	-3901,-12854
chr5:121296532-121297048	chr5	+	121296596	121297068	True	NM_152546,NM_001178102	chr5,chr5	+,-	SRFBP1,LOX	587,115900
chrX:134232419-134232667	chrX	+	134232423	134232615	True	NR_024493,NM_001078171	chrX,chrX	-,+	NCRNA00087,FAM127A	168,-66141
chr1:157013447-157015198	chr1	+	157013506	157015246	True	NM_198236,NM_014784,NR_001560	chr1,chr1,chr1	-,-,+	ARHGEF11,ARHGEF11,CYCSP52	-34,-34,82907
chr1:157660317-157662168	chr1	+	157660384	157661837	True	NM_018240,NM_052939	chr1,chr1	+,-	KIRREL,FCRL3	301225,8861
chr4:39079861-39081198	chr4	+	39080621	39081224	True	NM_199039,NM_024943	chr4,chr4	+,-	KLHL5,TMEM156	-16829,-46580
chr1:40504142-40505375	chr1	+	40504348	40505418	True	NM_006367,NM_000310,NM_001105530	chr1,chr1,chr1	+,-,+	CAP1,PPT1,CAP1	836,57774,836
chr10:18556787-18557272	chr10	+	18556943	18557290	True	NM_000724,NM_182543	chr10,chr10	+,-	CACNB2,NSUN6	-7417,383319
chr19:9202494-9203431	chr19	+	9202924	9203153	True	NM_001005193,NM_001004456	chr19,chr19	-,+	OR7G2,OR1M1	10880,767
chrX:103409483-103409905	chrX	+	103409588	103409943	True	NM_001012755,NM_207318	chrX,chrX	-,+	MCART6,FAM199X	-7880,1357
chr14:39570543-39571155	chr14	+	39570913	39571164	True	NM_006364,NM_001009182	chr14,chr14	-,+	SEC23A,SIP1	1330,12323
chr10:27263562-27265265	chr10	+	27263684	27265122	True	NR_026795,NM_001172303	chr10,chr10	-,+	NCRNA00202,MASTL	-32754,178630
chr16:3142130-3142348	chr16	+	3142173	3142353	True	NM_001042428,NM_032805	chr16,chr16	+,-	ZNF205,ZSCAN10	20209,562
chr1:43825051-43825694	chr1	+	43825065	43825675	True	NM_022821,NM_001255	chr1,chr1	-,+	ELOVL1,CDC20	8074,-490
chr6:125475759-125476405	chr6	+	125475979	125476344	True	NM_016063,NM_003287,NM_001003396,NM_001003397,NM_001003395	chr6,chr6,chr6,chr6,chr6	-,+,+,+,+	HDDC2,TPD52L1,TPD52L1,TPD52L1,TPD52L1	146997,-1151,-1151,-1151,-610
chr17:33842302-33842645	chr17	+	33842309	33842449	True	NR_003037,NM_001195790	chr17,chr17	+,-	SNORD7,SLFN12L	58226,-27551
chr7:2440979-2441691	chr7	+	2441339	2441727	True	NM_018641,NM_013321	chr7,chr7	+,-	CHST12,SNX8	1531,-87240
chr1:48234079-48234691	chr1	+	48234110	48234710	True	NM_001194986,NM_004474	chr1,chr1	-,+	LOC388630,FOXD2	227902,-332472
chr20:2646774-2648216	chr20	+	2647019	2647698	True	NM_174855,NM_174856,NM_006899,NR_002738,NR_002739	chr20,chr20,chr20,chr20,chr20	-,-,-,+,+	IDH3B,IDH3B,IDH3B,SNORD57,SNORD56	-2176,-2176,-2176,-9492,-9807
chr1:8025714-8026025	chr1	+	8025738	8025862	True	NM_001561,NM_007262,NM_001123377	chr1,chr1,chr1	-,+,+	TNFRSF9,PARK7,PARK7	-22513,-4076,-4076
chr1:226958616-226960373	chr1	+	226959344	226960324	True	NM_002221,NM_000447	chr1,chr1	-,+	ITPKB,PSEN2	-32468,97948
chr10:16480440-16480674	chr10	+	16480596	16480656	True	NM_001001484,NM_001010908,NM_030664	chr10,chr10,chr10	+,-,+	PTER,C1QL3,PTER	-1680,83398,-1680
chr20:36130163-36130544	chr20	+	36130163	36130495	True	NM_005386,NM_001167823	chr20,chr20	+,-	NNAT,BLCAP	19111,22508
chr17:30226884-30228326	chr17	+	30227730	30228370	True	NM_015355,NM_018428	chr17,chr17	+,-	SUZ12,UTP6	35673,409
chr5:178054374-178054576	chr5	+	178054451	178054621	True	NM_020666,NM_058230	chr5,chr5	-,+	CLK4,ZNF354B	-397,232332
chr7:150442464-150443125	chr7	+	150442536	150442997	True	NM_001162367,NM_001101311,NM_018384	chr7,chr7,chr7	+,-,+	LOC100128542,TMEM176B,GIMAP5	3826,54675,-8151
chr2:72373889-72374416	chr2	+	72373892	72374305	True	NM_019885,NM_001130987	chr2,chr2	-,+	CYP26B1,DYSF	708,-680111
chr1:152192368-152192635	chr1	+	152192376	152192648	True	NM_001009931,NM_178438	chr1,chr1	-,+	HRNR,LCE5A	4071,290671
chr1:144678789-144680595	chr1	+	144679105	144680623	True	NR_037182,NM_001037675	chr1,chr1	-,+	LOC653513,NBPF9	48,-64213
chr1:144678789-144680595	chr1	+	144955300	144955583	False	NM_004892,NM_001002811	chr1,chr1	+,-	SEC22B,PDE4DIP	140823,-23268
chr14:50557940-50558227	chr14	+	50557968	50558186	True	NM_001014830,NM_001663	chr14,chr14	-,+	C14orf183,ARF6	1225,-198290
chr10:75451409-75452966	chr10	+	75452205	75453006	True	NM_001144000,NM_004922	chr10,chr10	-,+	AGAP5,SEC24C	4598,51124
chr17:58675821-58677089	chr17	+	58675997	58676960	True	NM_003620,NM_006380	chr17,chr17	+,-	PPM1D,APPBP2	583,-72417
chr19:46009017-46009561	chr19	+	46009367	46009603	True	NM_003370,NM_005619,NM_206900,NM_001080401	chr19,chr19,chr19,chr19	+,-,-,+	VASP,RTN2,RTN2,PPM1N	1084,-9056,-9054,-7688
chr20:62152036-62152314	chr20	+	62152121	62152187	True	NM_024299,NM_005975	chr20,chr20	+,-	PPDPF,PTK6	-39,16570
chr11:67721651-67722281	chr11	+	67721741	67722251	True	NM_030930,NM_001161473	chr11,chr11	-,+	UNC93B1,ALDH3B1	49392,53796
chr5:67594335-67596158	chr5	+	67594505	67596159	True	NM_181504,NM_176816	chr5,chr5	+,-	PIK3R1,CCDC125	-8070,1020302
chrX:69665389-69665767	chrX	+	69665517	69665581	True	NM_020730,NM_016484,NM_021120,NM_001166278	chrX,chrX,chrX,chrX	+,-,+,+	DLG3,PDZD11,DLG3,DLG3	6573,-155719,-863,9364
chr1:22301395-22301617	chr1	+	22301421	22301533	True	NM_005529,NM_007352	chr1,chr1	-,+	HSPG2,CELA3B	-37671,1884
chr1:22301395-22301617	chr1	+	22326347	22326399	False	NM_005529,NM_005747	chr1,chr1	-,+	HSPG2,CELA3A	-62597,1749
chr2:73118506-73119411	chr2	+	73118628	73119398	True	NM_003124,NM_015189	chr2,chr2	+,-	SPR,EXOC6B	-4167,-65451
chr9:13206834-13207235	chr9	+	13206937	13207133	True	NM_203403,NM_003829	chr9,chr9	+,-	C9orf150,MPDZ	-431982,43290
chr2:169851394-169852366	chr2	+	169851409	169852404	True	NM_005771,NM_003742	chr2,chr2	+,-	DHRS9,ABCB11	68894,35479
chr2:130955719-130955919	chr2	+	130955730	130955966	True	NM_025029,NM_207312	chr2,chr2	+,-	MZT2B,TUBA3E	-16280,118
chr2:130955719-130955919	chr2	-	132233803	132233927	False	NM_001085365,NM_080386	chr2,chr2	-,+	MZT2A,TUBA3D	16187,-188
chr2:11448603-11449187	chr2	+	11448602	11449236	True	NM_152391,NM_004850	chr2,chr2	+,-	PQLC3,ROCK2	-153113,35525
chr4:68441851-68443610	chr4	+	68441888	68443261	True	NM_012108,NM_001812	chr4,chr4	+,-	STAP1,CENPC1	-17493,-30632
chr3:153203214-153203807	chr3	+	153203456	153203846	True	NR_037901,NM_001101337	chr3,chr3	-,+	LOC100507524,C3orf79	635203,-1229
chr9:38621988-38622351	chr9	+	38622160	38622322	True	NR_027294,NM_147195	chr9,chr9	+,-	FAM201A,ANKRD18A	-1126,-1800
chr7:74678773-74678973	chr7	+	74678782	74678915	True	NM_001003795,NR_003580	chr7,chr7	+,-	GTF2IRD2B,LOC100093631	-170495,-25323
chr7:74678773-74678973	chr7	-	72543709	72543842	False	NR_003664,NR_003580	chr7,chr7	-,+	SPDYE8P,LOC100093631	-43400,25169
chr7:74678773-74678973	chr7	-	74353231	74353313	False	NM_001025202,NM_001145063	chr7,chr7	-,+	STAG3L2,GATSL1	-46500,25769
chr7:74678773-74678973	chr7	+	74893039	74893172	False	NM_001145064,NR_003664	chr7,chr7	-,+	GATSL2,SPDYE8P	-25698,43360
chr11:77899139-77899362	chr11	+	77899336	77899404	True	NM_001029859,NM_020798	chr11,chr11	-,+	KCTD21,USP35	310,453
chr14:105995191-105995535	chr14	+	105995282	105995465	True	NM_025268,NM_001519	chr14,chr14	+,-	TMEM121,BRF1	-2380,-227953
chr1:22140522-22140982	chr1	+	22140661	22141011	True	NM_001032730,NM_001013693	chr1,chr1	-,+	USP48,LDLRAD2	-30973,-1956
chr1:45138409-45139392	chr1	+	45138520	45139332	True	NM_001145636,NM_024587	chr1,chr1	+,-	C1orf228,TMEM53	1061,817
chr16:30006936-30007182	chr16	+	30006960	30007209	True	NM_003609,NM_173618	chr16,chr16	-,+	HIRIP3,INO80E	253,321
chr20:30867427-30868439	chr20	+	30867630	30868240	True	NM_002657,NM_004798	chr20,chr20	-,+	PLAGL2,KIF3B	-72084,-2227
chr6:31803023-31803612	chr6_qbl_hap6	+	3096772	3096959	False	NM_001040437,NR_002745,NM_005527,NR_002742,NM_005346,NM_001040438	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,SNORD52,HSPA1B,C6orf48	-471,-124,-20290,1549,-7660,-471
chr6:31803023-31803612	chr6_dbb_hap3	+	3088700	3088887	False	NM_001040437,NR_002745,NM_005527,NR_002742,NM_005346,NM_001040438	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,SNORD52,HSPA1B,C6orf48	-471,-124,-20278,1551,-7652,-471
chr6:31803023-31803612	chr6	+	31803114	31803301	True	NM_001040437,NR_002745,NM_005527,NR_002742,NM_005346,NM_001040438	chr6,chr6,chr6,chr6,chr6,chr6	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,SNORD52,HSPA1B,C6orf48	-472,-125,-20279,1551,-7653,-472
chr6:31803023-31803612	chr6_apd_hap1	+	3117867	3118054	False	NM_001040437,NR_002745,NM_005527,NR_002742,NM_005346,NM_001040438	chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,SNORD52,HSPA1B,C6orf48	-471,-124,-20271,1553,-7642,-471
chr6:31803023-31803612	chr6_cox_hap2	+	3312689	3312876	False	NM_001040437,NR_002745,NM_005527,NR_002742,NM_005346,NM_001040438	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,SNORD52,HSPA1B,C6orf48	-471,-124,-20274,1550,-7646,-471
chr1:112282557-112282896	chr1	+	112282625	112282921	True	NM_019099,NM_007204	chr1,chr1	-,+	C1orf183,DDX20	-579,15268
chr1:32646204-32646956	chr1	+	32646306	32646812	True	NM_175852,NM_019118	chr1,chr1	+,-	TXLNA,TMEM234	-1012,41164
chr16:200440-201916	chr16	+	200859	201792	True	NM_001077350,NM_005332	chr16,chr16	-,+	NPRL3,HBZ	-12187,1061
chr14:21539713-21539968	chr14	+	21539779	21539899	True	NM_016423,NM_018071	chr14,chr14	-,+	ZNF219,ARHGEF40	26959,-1303
chr6:34390917-34392505	chr6	+	34391327	34392334	True	NM_001204091,NM_001203245,NM_020804,NM_001202470,NM_001014	chr6,chr6,chr6,chr6,chr6	-,-,+,-,-	RPS10,RPS10,PACSIN1,RPS10-NUDT3,RPS10	1618,1534,41518,1618,1618
chr5:68629388-68629690	chr5	+	68629506	68629732	True	NM_176816,NM_133343	chr5,chr5	-,+	CCDC125,RAD17	-13096,35391
chr5:10567203-10567629	chr5	+	10567206	10567574	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-2822,193863
chr16:1728060-1728325	chr16	+	1728112	1728340	True	NM_144570,NM_014714	chr16,chr16	+,-	HN1L,IFT140	19,-66003
chr9:77502671-77503700	chr9	+	77502725	77503110	True	NM_012383,NM_001177310,NM_001177311,NM_017662	chr9,chr9,chr9,chr9	+,-,-,-	OSTF1,TRPM6,TRPM6,TRPM6	200287,-89,-462,-41
chr1:20879874-20880203	chr1	+	20879880	20880230	True	NM_024544,NM_207334	chr1,chr1	-,+	MUL1,FAM43B	-45206,-999
chr7:55434058-55434268	chr7	+	55434064	55434248	True	NM_018697,NM_030796	chr7,chr7	+,-	LANCL2,VOPP1	-974,206002
chr3:47843911-47844159	chr3	+	47843968	47844041	True	NM_003074,NM_014966,NM_138615	chr3,chr3,chr3	-,+,+	SMARCC1,DHX30,DHX30	-20563,357,357
chr2:231920738-231921537	chr2	+	231920750	231921478	True	NR_033879,NM_002807,NM_001191037,NR_034059	chr2,chr2,chr2,chr2	-,+,+,+	LOC348761,PSMD1,PSMD1,PSMD1	-60003,99,99,99
chr8:80681689-80681947	chr8	+	80681896	80681978	True	NM_001040708,NM_007029,NM_012258	chr8,chr8,chr8	-,+,-	HEY1,STMN2,HEY1	-1798,-158898,-1798
chr19:19778957-19779229	chr19	+	19778961	19779263	True	NM_020410,NM_033204	chr19,chr19	-,+	ATP13A1,ZNF101	-4458,399
chr10:101685294-101686324	chr10	+	101685462	101686284	True	NR_024130,NM_015221	chr10,chr10	+,-	DNMBP-AS1,DNMBP	681,83442
chr8:121822888-121823227	chr8	+	121822942	121823246	True	NM_021021,NM_022045	chr8,chr8	-,+	SNTB1,MTBP	1113,-365328
chr10:15003629-15004438	chr10	+	15004140	15004479	True	NM_001080836,NM_001033858,NM_022487,NM_001033857,NM_001033855	chr10,chr10,chr10,chr10,chr10	+,-,-,-,-	MEIG1,DCLRE1C,DCLRE1C,DCLRE1C,DCLRE1C	-2754,-8046,-8046,-8046,-8046
chr5:82375482-82376065	chr5	+	82375646	82375971	True	NM_003401,NM_022550,NM_022406,NM_174909	chr5,chr5,chr5,chr5	+,+,+,-	XRCC4,XRCC4,XRCC4,TMEM167A	-2387,-2387,-2387,-2374
chr1:197887722-197887953	chr1	+	197887753	197888003	True	NM_001014434,NM_001195216,NM_020204	chr1,chr1,chr1	+,-,+	LHX9,DENND1B,LHX9	-6169,-143130,-1287
chr1:55231129-55232043	chr1	+	55231365	55231973	True	NM_001110533,NM_152268	chr1,chr1	+,-	C1orf177,PARS2	39762,-1139
chr1:53005238-53005813	chr1	+	53005322	53005384	True	NM_001009881,NM_015696	chr1,chr1	-,+	ZCCHC11,GPX7	13428,62658
chr1:48243449-48244140	chr1	+	48243579	48244139	True	NM_001194986,NM_004474	chr1,chr1	-,+	LOC388630,FOXD2	218473,-341941
chr5:139927761-139928548	chr5	+	139927936	139928542	True	NM_001035235,NM_003732	chr5,chr5	-,+	SRA1,EIF4EBP3	9186,-736
chr17:39742976-39743560	chr17	+	39743132	39743548	True	NM_005801,NM_000526	chr17,chr17	+,-	EIF1,KRT14	101578,9
chr3:39532144-39532430	chr3	+	39532392	39532472	True	NM_001171174,NR_003090	chr3,chr3	-,+	CX3CR1,MOBP	-209166,-23373
chr19:19740092-19740806	chr19	+	19740260	19740756	True	NM_004720,NM_033204	chr19,chr19	-,+	LPAR2,ZNF101	-1221,38906
chr10:88719260-88719868	chr10	+	88719384	88719866	True	NM_003087,NM_024756,NM_006829	chr10,chr10,chr10	+,-,+	SNCG,MMRN2,C10orf116	-1147,-1959,8321
chr12:133655013-133655331	chr12	+	133655024	133655150	True	NM_003440,NM_001164715	chr12,chr12	+,-	ZNF140,ZNF605	1886,-122132
chr11:67887549-67888143	chr11	+	67887737	67888066	True	NM_001277,NM_212469,NM_006053	chr11,chr11,chr11	-,-,+	CHKA,CHKA,TCIRG1	844,844,-77341
chr11:72144074-72144506	chr11	+	72144149	72144284	True	NM_001567,NM_030813	chr11,chr11	+,-	INPPL1,CLPB	-208318,1341
chr1:202168792-202169279	chr1	+	202168854	202169249	True	NR_037664,NM_021636,NM_001017403	chr1,chr1,chr1	-,+,+	PTPN7,LGR6,LGR6	-38138,3655,-5787
chr2:103373556-103375406	chr2	+	103373847	103375450	True	NM_144632,NM_032718	chr2,chr2	+,-	TMEM182,MFSD9	3039,-20510
chrX:151935389-151935778	chrX	+	151935391	151935739	True	NM_001129826,NM_001129828,NM_005362,NM_004909,NM_001080848	chrX,chrX,chrX,chrX,chrX	+,+,-,+,+	CSAG3,CSAG3,MAGEA3,CSAG2,CSAG2	-7631,-7708,2551,-7708,-7708
chr1:1631756-1632046	chr1	+	1631782	1631930	True	NM_001110781,NR_002946	chr1,chr1	-,+	SLC35E2B,MMP23A	-7539,-455
chr1:1631756-1632046	chr1	+	1568563	1568711	False	NM_001110781,NM_006983,NR_002946	chr1,chr1,chr1	-,+,+	SLC35E2B,MMP23B,MMP23A	55582,-1054,-455
chr19:1607515-1608157	chr19	+	1607515	1608025	True	NM_006830,NR_026557	chr19,chr19	-,+	UQCR11,PLK5P	-2032,-83488
chr10:69876347-69876696	chr10	+	69876568	69876709	True	NM_032578,NM_022079	chr10,chr10	+,-	MYPN,HERC4	-7374,-41465
chr3:119174105-119175908	chr3	+	119174254	119175512	True	NM_018266,NM_152305	chr3,chr3	-,+	TMEM39A,POGLUT1	7011,12272
chr6:130006172-130007140	chr6	+	130006237	130007075	True	NM_001007102,NM_033515	chr6,chr6	+,-	L3MBTL3,ARHGAP18	332652,24345
chr4:120221199-120221645	chr4	+	120221206	120221692	True	NM_019050,NM_001170330,NM_001001701	chr4,chr4,chr4	+,-,-	USP53,C4orf3,C4orf3	-87475,3958,326
chr11:119054048-119055384	chr11	+	119054291	119054840	True	NM_001168468,NM_024791,NM_001145018,NR_033122	chr11,chr11,chr11,chr11	+,+,-,+	PDZD3,PDZD3,CCDC153,PDZD3	1325,1325,11795,1325
chr9:123690236-123690731	chr9	+	123690262	123690650	True	NM_005658,NR_024408,NM_001190945	chr9,chr9,chr9	-,+,-	TRAF1,LOC253039,TRAF1	-1089,-84993,852
chr3:36987318-36987650	chr3	+	36987406	36987668	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	-858,47172
chr2:88469527-88469728	chr2	+	88469714	88469776	True	NM_018271,NM_001443	chr2,chr2	+,-	THNSL2,FABP1	58,-42064
chr18:43680139-43680533	chr18	+	43680316	43680409	True	NR_026978,NM_138443,NM_004046,NM_001001937	chr18,chr18,chr18,chr18	+,+,-,-	HAUS1,HAUS1,ATP5A1,ATP5A1	3888,3888,-2029,3843
chr17:39580515-39581964	chr17	+	39580943	39581929	True	NM_030975,NM_003770	chr17,chr17	+,-	KRTAP9-9,KRT37	-169359,-121
chr17:10444777-10445310	chr17	+	10445190	10445290	True	NM_001100112,NM_020233,NM_017534	chr17,chr17,chr17	-,+,-	MYH2,C17orf48,MYH2	7712,155636,7789
chr21:28340152-28340926	chr21	+	28340288	28340915	True	NR_024357,NM_007038	chr21,chr21	+,-	NCRNA00113,ADAMTS5	753782,-849
chr5:78406597-78408246	chr5	+	78406843	78407479	True	NM_013391,NM_001713	chr5,chr5	-,+	DMGDH,BHMT	-41394,124
chr10:43969057-43970161	chr10	+	43969126	43970040	True	NR_026693,NM_001098204	chr10,chr10	+,-	ZNF487P,HNRNPF	-36605,-64430
chr16:29973048-29973327	chr16	+	29973125	29973267	True	NM_001083613,NM_003609,NM_194280	chr16,chr16,chr16	+,-,+	TMEM219,HIRIP3,TMEM219	83,34195,83
chr9:134585312-134585995	chr9	+	134585316	134585825	True	NM_007171,NM_198679	chr9,chr9	+,-	POMT1,RAPGEF1	-207079,-87
chr16:59789866-59791382	chr16	+	59790046	59791401	True	NR_028471,NM_024860	chr16,chr16	-,+	LOC644649,SETD6	-951,-1240714
chr3:52314183-52314952	chr3	+	52314183	52314696	True	NM_001144951,NM_025222,NR_026701,NR_026700,NR_026702,NM_145262,NR_026699	chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,-,+,+,+,+,+	GLYCTK,WDR82,GLYCTK,GLYCTK,GLYCTK,GLYCTK,GLYCTK	7139,-1524,7139,7139,7139,7139,7139
chr3:147122987-147123713	chr3	+	147123001	147123637	True	NM_001168378,NM_001168379,NM_032153,NM_003412	chr3,chr3,chr3,chr3	-,-,-,+	ZIC4,ZIC4,ZIC4,ZIC1	-930,42,820,3543
chr14:73604702-73605017	chr14	+	73604807	73604883	True	NM_007318,NM_000021,NM_021260	chr14,chr14,chr14	+,+,-	PSEN1,PSEN1,ZFYVE1	-1725,-1725,-110887
chr8:92379326-92380944	chr8	+	92379757	92380599	True	NM_018710,NM_052832	chr8,chr8	-,+	TMEM55A,SLC26A7	-326554,-118292
chrX:15372386-15373944	chrX	+	15372512	15373981	True	NR_033836,NM_203281	chrX,chrX	-,+	PIGA,BMX	-18836,144918
chr9:115248154-115248727	chr9	+	115248358	115248688	True	NR_036085,NM_133465	chr9,chr9	-,+	MIR3134,KIAA1958	-135813,559
chr2:113882703-113883873	chr2	+	113882720	113883735	True	NM_173842,NM_000577,NM_173841,NM_173178,NM_173843	chr2,chr2,chr2,chr2,chr2	+,+,+,-,+	IL1RN,IL1RN,IL1RN,IL1F8,IL1RN	1402,-7301,-7301,-72280,-7301
chr15:66993993-66994407	chr15	+	66994154	66994372	True	NM_005585,NR_027654,NM_207338,NM_001142861	chr15,chr15,chr15,chr15	+,+,-,+	SMAD6,SMAD6,LCTL,SMAD6	301,301,-136319,6557
chr1:109193346-109194073	chr1	+	109193405	109193993	True	NM_001102592,NM_018061	chr1,chr1	-,+	HENMT1,PRPF38B	9810,40938
chr12:101188574-101189062	chr12	+	101188578	101189049	True	NM_145913,NM_178826	chr12,chr12	-,+	SLC5A8,ANO4	415024,-256
chr14:31480421-31481217	chr14	+	31480423	31480922	True	NM_007077,NR_030354	chr14,chr14	+,-	AP4S1,MIR624	13760,3085
chr1:26793364-26793942	chr1	+	26793444	26793876	True	NM_005517,NM_173574	chr1,chr1	+,-	HMGN2,ZNF683	5025,-94178
chr18:19181329-19182036	chr18	+	19181523	19181708	True	NM_006938,NM_052911	chr18,chr18	+,-	SNRPD1,ESCO1	10551,-830
chrX:31087893-31089576	chrX	+	31088002	31089371	True	NM_203391,NM_031894	chrX,chrX	+,-	GK,FTHL17	-416578,856
chr14:69726073-69726317	chr14	+	69726085	69726365	True	NM_003861,NM_020692,NM_001168368	chr14,chr14,chr14	-,+,+	DCAF5,GALNTL1,GALNTL1	-106171,315,315
chr7:1178687-1179456	chr7	+	1178874	1179408	True	NM_001134396,NM_001134395,NM_032350,NM_001098201	chr7,chr7,chr7,chr7	-,-,-,+	C7orf50,C7orf50,C7orf50,GPER	-981,-981,-981,-51202
chr9:135757309-135759236	chr9	+	135757574	135759096	True	NM_152572,NM_018956	chr9,chr9	-,+	AK8,C9orf9	-3376,-3335
chr17:30349509-30350231	chr17	+	30349623	30350137	True	NM_018428,NM_052888	chr17,chr17	-,+	UTP6,LRRC37B	-120894,-1519
chr17:30349509-30350231	chr17	-	29373889	29374403	False	NM_001128147,NM_024683	chr17,chr17	+,-	NF1,C17orf42	47541,-140603
chr16:64275917-64277355	chr16	+	64276033	64277317	True	NM_001795,NM_001797	chr16,chr16	+,-	CDH5,CDH11	2123207,878652
chr3:23847350-23847611	chr3	+	23847438	23847504	True	NM_003341,NM_182666,NM_020345,NM_001202476	chr3,chr3,chr3,chr3	+,+,-,+	UBE2E1,UBE2E1,NKIRAS1,UBE2E1	-105,-105,111083,4429
chr8:146278390-146278737	chr8	+	146278432	146278724	True	NR_023392	chr8	-	ZNF252	-50147
chr4:68338364-68338942	chr4	+	68338442	68338736	True	NM_001812,NM_012108	chr4,chr4	-,+	CENPC1,STAP1	72580,85709
chr9:130700907-130702056	chr9	+	130701086	130701748	True	NM_001135219,NM_003863,NM_001006641	chr9,chr9,chr9	-,-,+	PIP5KL1,DPM2,SLC25A25	-8010,-323,128730
chr19:41508544-41509273	chr19	+	41508776	41509260	True	NM_030589,NM_000767	chr19,chr19	-,+	CYP2A7,CYP2B6	-120119,-11636
chr6:24910121-24910560	chr6	+	24910179	24910555	True	NM_015895,NM_014722	chr6,chr6	+,-	GMNN,FAM65B	-135066,690
chrX:119384580-119384798	chrX	+	119384580	119384828	True	NM_006777,NR_027131,NM_001184742	chrX,chrX,chrX	+,-,+	ZBTB33,NKAPP1,ZBTB33	-24,-5458,-21
chr20:32077987-32078187	chr20	+	32077998	32078116	True	NM_001032999,NM_003098	chr20,chr20	+,-	CBFA2T2,SNTA1	-121,-46300
chr13:57715282-57715639	chr13	+	57715361	57715669	True	NM_001130407,NM_001130406,NM_001130405,NM_001130404,NM_198441,NR_031628	chr13,chr13,chr13,chr13,chr13,chr13	+,+,+,+,+,-	PRR20E,PRR20D,PRR20C,PRR20B,PRR20A,MIR1297	-360,-360,-360,-360,-360,-2829178
chr13:57715282-57715639	chr13	+	57721931	57722239	False	NM_001130407,NM_001130406,NM_001130405,NM_001130404,NM_198441,NR_031628	chr13,chr13,chr13,chr13,chr13,chr13	+,+,+,+,+,-	PRR20E,PRR20D,PRR20C,PRR20B,PRR20A,MIR1297	-360,-360,-360,-360,-360,-2835748
chr13:57715282-57715639	chr13	+	57728504	57728812	False	NM_001130407,NM_001130406,NM_001130405,NM_001130404,NM_198441,NR_031628	chr13,chr13,chr13,chr13,chr13,chr13	+,+,+,+,+,-	PRR20E,PRR20D,PRR20C,PRR20B,PRR20A,MIR1297	-360,-360,-360,-360,-360,-2842321
chr13:57715282-57715639	chr13	+	57735075	57735383	False	NM_001130407,NM_001130406,NM_001130405,NM_001130404,NM_198441,NR_031628	chr13,chr13,chr13,chr13,chr13,chr13	+,+,+,+,+,-	PRR20E,PRR20D,PRR20C,PRR20B,PRR20A,MIR1297	-360,-360,-360,-360,-360,-2848892
chr13:57715282-57715639	chr13	+	57741640	57741948	False	NM_001130407,NM_001130406,NM_001130405,NM_001130404,NM_198441,NM_030932	chr13,chr13,chr13,chr13,chr13,chr13	+,+,+,+,+,-	PRR20E,PRR20D,PRR20C,PRR20B,PRR20A,DIAPH3	-360,-360,-360,-360,-360,2845445
chr16:19533813-19534720	chr16	+	19533816	19534396	True	NM_001199022,NM_014711,NM_016641	chr16,chr16,chr16	+,+,-	CP110,CP110,GDE1	782,782,-366
chr12:50303901-50304293	chr12	+	50303924	50304330	True	NM_000486,NM_012306,NR_026948	chr12,chr12,chr12	+,-,-	AQP2,FAIM2,LOC283332	40193,-6164,1366
chr12:88429586-88431118	chr12	+	88429748	88431155	True	NM_152589,NM_001009894	chr12,chr12	-,+	C12orf50,C12orf29	-6572,-531
chr22:46936618-46937146	chr22	+	46936695	46937033	True	NM_015124,NM_014246	chr22,chr22	+,-	GRAMD4,CELSR1	85624,-3628
chr1:40846292-40846917	chr1	+	40846542	40846931	True	NM_022733,NM_001198978,NM_001852	chr1,chr1,chr1	+,+,-	SMAP2,SMAP2,COL9A2	-7221,-6294,-63603
chr17:30348887-30349509	chr17	+	30348919	30349341	True	NM_018428,NM_052888	chr17,chr17	-,+	UTP6,LRRC37B	-120190,-818
chr2:201212235-201214078	chr2	+	201212295	201213940	True	NM_001100423,NM_152387	chr2,chr2	+,-	SPATS2L,KCTD18	-40991,160902
chr2:85813553-85813914	chr2	+	85813718	85813904	True	NM_003761,NM_016494,NM_001031738,NM_006634	chr2,chr2,chr2,chr2	+,+,-,+	VAMP8,RNF181,TMEM150A,VAMP5	-9159,8932,15970,-2242
chr1:150479967-150480616	chr1	+	150480064	150480612	True	NM_004425,NM_001202858,NM_001197320,NM_022664	chr1,chr1,chr1,chr1	+,+,-,+	ECM1,ECM1,MCL1,ECM1	28,28,71652,28
chr22:30277389-30277735	chr22	+	30277430	30277619	True	NM_021090,NM_153051,NM_153050,NM_032204	chr22,chr22,chr22,chr22	+,+,+,-	MTMR3,MTMR3,MTMR3,ASCC2	1538,1538,1538,-43176
chr16:1544317-1544564	chr16	+	1544321	1544599	True	NM_001013658,NM_016111	chr16,chr16	-,+	PTX4,TELO2	-5853,-1020
chr15:64343068-64344405	chr15	+	64343207	64344389	True	NM_003099,NM_014326	chr15,chr15	+,-	SNX1,DAPK2	43787,-4686
chr2:47790081-47790797	chr2	+	47790157	47790733	True	NM_022055,NM_000251	chr2,chr2	-,+	KCNK12,MSH2	6787,-159945
chr8:103253224-103253773	chr8	+	103253525	103253636	True	NM_015713,NM_001172477,NM_001172478,NM_024410	chr8,chr8,chr8,chr8	-,-,-,+	RRM2B,RRM2B,RRM2B,ODF1	-2179,-2466,-2179,310211
chr6:114178796-114179177	chr6	+	114178885	114179169	True	NM_001527,NM_002356	chr6,chr6	-,+	HDAC2,MARCKS	113250,-409
chr3:183972355-183973579	chr3	+	183972630	183973562	True	NM_005787,NM_001006941,NM_033259,NM_032331,NM_014693,NR_024534,NR_024533	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,+,+,-,-	ALG3,ALG3,CAMK2N2,ECE2,ECE2,ALG3,ALG3	-5871,-5317,5741,-5236,-5236,-5871,-5871
chr12:56622975-56623440	chr12	+	56622988	56623164	True	NM_005785,NM_173596,NM_194359,NM_194358,NM_001135195,NM_024068	chr12,chr12,chr12,chr12,chr12,chr12	-,+,-,-,+,+	RNF41,SLC39A5,RNF41,RNF41,SLC39A5,OBFC2B	-7284,655,-7253,-7284,1336,-4914
chr3:171177222-171177453	chr3	+	171177324	171177452	True	NM_015028,NM_001164436,NR_027767,NM_001161566,NM_001161564,NM_001161565,NM_001161562,NM_001161563,NM_001161560,NM_001161561	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-,-,-,-,-	TNIK,TMEM212,TNIK,TNIK,TNIK,TNIK,TNIK,TNIK,TNIK,TNIK	795,383686,795,795,795,795,795,795,795,795
chr17:72427691-72427944	chr17	+	72427744	72427944	True	NM_018653,NM_022036,NM_001080466	chr17,chr17,chr17	+,+,-	GPRC5C,GPRC5C,BTBD17	1891,-128,-69786
chr1:111215132-111215964	chr1	+	111215267	111215891	True	NM_002232,NR_003599	chr1,chr1	-,+	KCNA3,CYMP	1814,-191938
chr22:50985031-50985352	chr22	+	50985030	50985248	True	NM_138433,NM_001014440	chr22,chr22	+,-	KLHDC7B,ODF3B	1213,-14022
chr10:33199267-33200476	chr19	+	14732942	14732992	True	NM_004146,NM_207390	chr19,chr19	-,+	NDUFB7,CLEC17A	-50053,-39097
chrX:128695319-128696347	chrX	+	128695369	128696308	True	NM_139035,NM_001587	chrX,chrX	-,+	SMARCA1,OCRL	-37909,-21181
chr12:110211366-110212287	chr12	+	110211379	110212327	True	NR_026662,NM_032829,NR_026661	chr12,chr12,chr12	-,+,-	MGC14436,C12orf34,MGC14436	-87,-59243,-90
chr19:34916246-34917156	chr19	+	34916559	34917157	True	NR_027620,NM_005499	chr19,chr19	-,+	LOC643719,UBA2	151489,2110
chr16:85214784-85215168	chr16	+	85214878	85215180	True	NR_033984,NM_198491	chr16,chr16	+,-	LOC400548,FAM92B	-44173,-68764
chr22:50052703-50052918	chr22	+	50052712	50052910	True	NR_026997,NM_014838	chr22,chr22	-,+	C22orf34,ZBED4	-1522,194586
chr12:8223389-8223709	chr12	+	8223432	8223514	True	NM_004054,NM_015509	chr12,chr12	-,+	C3AR1,NECAP1	-4477,11292
chr16:11363852-11364312	chr16	+	11363888	11364187	True	NM_021247,NM_005425,NM_152308,NM_002762	chr16,chr16,chr16,chr16	-,-,+,-	PRM3,TNP2,C16orf75,PRM2	3322,-728,75123,6207
chr20:45307578-45307915	chr20	+	45307788	45307919	True	NM_030777,NM_001011554,NM_001193340	chr20,chr20,chr20	+,-,-	SLC2A10,SLC13A3,SLC13A3	30359,5256,5256
chr18:39061605-39062182	chr18	+	39061646	39062182	True	NM_002647,NR_002838	chr18,chr18	+,-	PIK3C3,KC6	473016,38429
chr19:33554018-33554547	chr19	+	33554067	33554569	True	NM_033103,NM_018025	chr19,chr19	-,+	RHPN2,GPATCH1	1305,17216
chr6:138823657-138824555	chr6	+	138823765	138824574	True	NM_001144060,NM_014320	chr6,chr6	-,+	NHSL1,HEBP2	-3186,-98491
chr13:50464736-50465943	chr13	+	50464803	50465603	True	NR_003268,NM_001127482	chr13,chr13	+,-	CTAGE10P,C13orf1	-309,45084
chrY:14482033-14482965	chrY	+	14482214	14482924	True	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	291373,50515
chr1:247583873-247584622	chr1	+	247584068	247584572	True	NM_183395,NM_001079821,NM_004895,NM_001127461,NM_001004492,NM_001127462	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,-,+	NLRP3,NLRP3,NLRP3,NLRP3,OR2B11,NLRP3	-2768,-4661,-2768,-4661,30762,-2768
chr12:109577785-109578794	chr12	+	109577854	109578635	True	NM_001093,NM_001205180	chr12,chr12	+,-	ACACB,ALKBH2	-705,-46561
chr12:21927588-21927890	chr12	+	21927632	21927860	True	NM_030572,NM_004982	chr12,chr12	+,-	C12orf39,KCNJ8	-248429,-51
chr8:143278616-143278863	chr8	+	143278711	143278855	True	NM_145003,NR_024378	chr8,chr8	-,+	TSNARE1,NCRNA00051	205738,861
chr1:168106336-168106685	chr1	+	168106353	168106729	True	NM_153832,NM_001031800	chr1,chr1	-,+	GPR161,TIPRL	-729,41441
chr16:3406452-3406723	chr16	+	3406489	3406741	True	NM_012368,NM_001190476	chr16,chr16	+,-	OR2C1,MTRNR2L4	-651,15592
chr11:64863929-64864190	chr11	+	64864023	64864199	True	NM_013265,NM_080668	chr11,chr11	+,-	C11orf2,CDCA5	-391,-12408
chr7:73038086-73038407	chr7	+	73038157	73038437	True	NM_032951,NM_032952,NM_032953,NM_032954,NM_001077621	chr7,chr7,chr7,chr7,chr7	-,-,-,-,+	MLXIPL,MLXIPL,MLXIPL,MLXIPL,VPS37D	483,483,483,483,43736
chr16:1991453-1992278	chr16	+	1991541	1992080	True	NM_016332,NM_004548	chr16,chr16	-,+	SEPX1,NDUFB10	1265,17436
chr10:13037453-13039340	chr10	+	13037557	13039246	True	NM_031455,NM_001008211	chr10,chr10	-,+	CCDC3,OPTN	4512,102835
chr8:146012890-146013227	chr8	+	146012978	146013127	True	NM_000973,NM_033301,NM_030580,NM_213605	chr8,chr8,chr8,chr8	-,-,-,+	RPL8,RPL8,ZNF34,ZNF517	4729,4653,-253,11133
chr1:46908766-46909318	chr1	+	46908781	46908964	True	NM_001097611,NM_001441	chr1,chr1	-,+	KNCN,FAAH	107976,-48893
chrX:62690535-62691071	chrX	+	62690539	62691077	True	NM_001010888,NR_015353	chrX,chrX	+,-	ZC3H12B,LOC92249	2017537,89846
chr6:126307786-126308011	chr6	+	126307984	126308050	True	NM_016063,NM_001031712	chr6,chr6	-,+	HDDC2,TRMT11	-684702,-460
chr9:94902737-94902995	chr9	+	94902749	94903021	True	NR_015444,NM_178324,NR_027341	chr9,chr9,chr9	+,-,+	LOC100128076,SPTLC1,C9orf44	-7684,-25059,727
chr19:11780886-11782688	chr19	+	11780914	11782519	True	NR_028594,NM_001080493	chr19,chr19	+,-	ZNF833P,ZNF823	2293,67299
chr12:56201569-56202056	chr12	+	56201626	56201952	True	NR_026723,NR_026722,NM_033082,NM_014182	chr12,chr12,chr12,chr12	-,-,-,+	SARNP,SARNP,SARNP,ORMDL2	9642,9642,9642,9853
chr21:46046642-46047202	chr21	+	46046819	46047149	True	NM_198698,NM_198690	chr21,chr21	-,+	KRTAP12-4,KRTAP10-9	27477,98
chr5:68713177-68713575	chr5	+	68713181	68713279	True	NM_001015892,NM_001038603	chr5,chr5	-,+	TAF9,MARVELD2	-47341,-2300
chr5:34182417-34183271	chr5	+	34182652	34182941	True	NM_016568,NR_037951	chr5,chr5	+,-	RXFP3,C1QTNF3-AMACR	-246212,-58019
chr5:34182417-34183271	chr5	-	21491699	21491749	False	NR_027026,NM_004061	chr5,chr5	+,-	GUSBP1,CDH12	-32161,1362032
chr6:79943673-79944160	chr6	+	79943709	79944159	True	NM_001201363,NM_001201362,NM_001010844,NM_004242,NM_138730	chr6,chr6,chr6,chr6,chr6	-,-,+,-,-	HMGN3,HMGN3,IRAK1BP1,HMGN3,HMGN3	346,346,-366571,346,346
chr18:42260977-42261223	chr18	+	42261053	42261259	True	NM_015559,NM_001130110,NR_036203	chr18,chr18,chr18	+,+,-	SETBP1,SETBP1,MIR4319	-247,-972,288922
chr2:169674401-169675855	chr2	+	169674515	169675884	True	NM_020675,NM_052946	chr2,chr2	-,+	SPC25,NOSTRIN	71110,-15465
chr5:125937932-125938588	chr5	+	125937952	125938393	True	NM_001201377,NM_032177,NM_001202404,NM_001182	chr5,chr5,chr5,chr5	-,+,-,-	ALDH7A1,PHAX,ALDH7A1,ALDH7A1	-6870,-1396,-6870,-6870
chr10:52498201-52498672	chr10	+	52498224	52498348	True	NM_147156,NM_001079516	chr10,chr10	-,+	SGMS1,ASAH2B	-114487,1359
chr20:34545228-34546276	chr20	+	34545396	34546015	True	NM_033630,NM_080834,NM_016558	chr20,chr20,chr20	-,+,-	SCAND1,C20orf152,SCAND1	-2848,10513,-2115
chr16:2287263-2287468	chr16	+	2287263	2287465	True	NM_001374,NM_001178029	chr16,chr16	+,-	DNASE1L2,ECI1	-846,14187
chr5:156591456-156592867	chr5	+	156591511	156592772	True	NM_130899,NM_005546	chr5,chr5	-,+	FAM71B,ITK	557,15134
chr14:24601793-24602663	chr14	+	24601852	24602671	True	NM_016049,NM_203402,NM_006263,NM_176783	chr14,chr14,chr14,chr14	-,+,+,+	FAM158A,FITM1,PSME1,PSME1	8179,-1228,2706,2706
chr15:28578844-28579051	chr15	+	28578958	28579100	True	NM_004667,NR_033351	chr15,chr15	-,+	HERC2,GOLGA8F	-11663,44683
chr15:28578844-28579051	chr15	-	28822819	28822961	False	NR_036443,NR_033351	chr15,chr15	+,-	HERC2P9,GOLGA8F	76626,-44676
chr15:28578844-28579051	chr15	+	20723076	20723188	False	NR_036432,NR_027411	chr15,chr15	-,+	HERC2P3,GOLGA8C	-11643,44485
chr15:28578844-28579051	chr15	+	23389889	23389983	False	NR_036470,NR_002824	chr15,chr15	+,-	HERC2P7,HERC2P2	738,-11630
chr15:28578844-28579051	chr15	+	23677588	23677682	False	NM_005664,NM_019066	chr15,chr15	+,-	MKRN3,MAGEL2	132771,215361
chr22:38083898-38084170	chr22	+	38083912	38084188	True	NM_006498,NM_024313,NM_001039141	chr22,chr22,chr22	-,+,+	LGALS2,NOL12,TRIOBP	-107888,-1619,8806
chr7:39646175-39647358	chr7	+	39646225	39647159	True	NM_138701,NR_024390	chr7,chr7	-,+	C7orf11,LOC646999	527142,1926
chr1:93542485-93543649	chr1	+	93542583	93543233	True	NM_001167830,NM_001164392,NM_001164393,NM_007358,NM_001164391	chr1,chr1,chr1,chr1,chr1	-,+,+,+,+	TMED5,MTF2,MTF2,MTF2,MTF2	103069,1558,1558,1558,1558
chr4:83482171-83482611	chr4	+	83482182	83482627	True	NM_001080506,NM_021204	chr4,chr4	-,+	TMEM150C,ENOPH1	549,-130507
chr9:112402567-112402797	chr9	+	112402617	112402701	True	NM_002829,NM_001037293	chr9,chr9	-,+	PTPN3,PALM2	-142024,366
chr5:176438114-176438760	chr5	+	176438221	176438697	True	NM_001199297,NM_012279,NM_016290,NM_001199298	chr5,chr5,chr5,chr5	-,+,-,-	UIMC1,ZNF346,UIMC1,UIMC1	-4441,10999,-4778,-4426
chr6:106771407-106772804	chr6	+	106771417	106772823	True	NM_004849,NM_001624	chr6,chr6	-,+	ATG5,AIM1	922,186906
chrX:24483877-24484344	chrX	+	24483880	24484314	True	NM_001136233,NM_005391,NM_001142386	chrX,chrX,chrX	-,+,+	FAM48B2,PDK3,PDK3	-152448,-587,-587
chr12:56434373-56435154	chr12	+	56434578	56434986	True	NM_006928,NM_001029	chr12,chr12	-,+	PMEL,RPS26	-74082,699
chr2:23667318-23668362	chr2	+	23667487	23668346	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	481638,-59248
chr17:20055284-20056075	chr17	+	20055627	20055919	True	NM_007202,NM_001033555,NM_001033554	chr17,chr17,chr17	-,+,+	AKAP10,SPECC1,SPECC1	-174498,3482,3482
chr6:46141928-46142261	chr6	+	46141928	46142288	True	NM_014936,NM_021572	chr6,chr6	+,-	ENPP4,ENPP5	-44282,-3211
chr7:25218379-25219432	chr7	+	25218833	25219332	True	NM_138811,NM_016447	chr7,chr7	-,+	C7orf31,MPP6	542,-605803
chr8:97171615-97171825	chr8	+	97171705	97171825	True	NM_001001557,NM_014754	chr8,chr8	-,+	GDF6,PTDSS1	1245,102341
chr3:107632242-107633572	chr3	+	107632402	107633605	True	NR_015394,NR_024276	chr3,chr3	+,-	LOC285205,LOC151658	-30408,-35487
chr19:11649284-11649618	chr19	+	11649288	11649644	True	NM_001142464,NM_001142465,NM_016581,NR_024551,NM_001299	chr19,chr19,chr19,chr19,chr19	-,-,-,-,+	ECSIT,ECSIT,ECSIT,ECSIT,CNN1	-9301,-9301,-9301,-9608,48
chr1:25869460-25869986	chr1	+	25869671	25869957	True	NM_015627,NM_138618	chr1,chr1	+,-	LDLRAP1,RHCE	118,-122308
chrX:118109582-118110040	chrX	+	118109716	118110058	True	NM_001031855,NM_024778,NM_020721	chrX,chrX,chrX	+,+,-	LONRF3,LONRF3,KIAA1210	-1055,-1055,174534
chr16:18990970-18992620	chr16	+	18991148	18992426	True	NM_015092,NM_024847,NM_001160364	chr16,chr16,chr16	-,+,+	SMG1,TMC7,TMC7	-53422,2829,3182
chr22:36423956-36424194	chr22	+	36424069	36424135	True	NM_001082579,NM_001082578,NM_001136540	chr22,chr22,chr22	-,-,+	RBFOX2,RBFOX2,APOL1	500,500,224981
chr11:112059154-112060219	chr11	+	112059192	112059940	True	NM_001562,NM_001037290	chr11,chr11	-,+	IL18,BCO2	-24352,-12154
chr11:44097296-44098086	chr11	+	44097373	44098128	True	NM_032592,NM_021926,NM_001127219	chr11,chr11,chr11	+,-,+	ACCS,ALX4,ACCS	-9612,233639,-9695
chr12:48123670-48125409	chr12	+	48123952	48124859	True	NM_001172439,NM_006025,NM_001172440,NM_017842	chr12,chr12,chr12,chr12	-,-,-,+	ENDOU,ENDOU,ENDOU,SLC48A1	-4597,-4597,-4597,42107
chr11:65668149-65668419	chr11	+	65668213	65668352	True	NM_005438,NM_006848	chr11,chr11	-,+	FOSL1,CCDC85B	-216,-10389
chr7:5015393-5016626	chr7	+	5015940	5016460	True	NM_198403,NR_023384,NR_023385,NR_015449	chr7,chr7,chr7,chr7	-,+,+,+	MMD2,RNF216L,RNF216L,RNF216L	-17096,-2376,-2376,-2376
chrX:40692785-40693386	chrX	+	40692965	40693424	True	NR_027761,NM_001195522	chrX,chrX	-,+	LOC100132831,LOC347411	-516,-210198
chr12:130530135-130531201	chr12	+	130530191	130531185	True	NR_024457,NM_007197	chr12,chr12	-,+	LOC100190940,FZD10	-3304,115818
chr10:47419067-47419990	chr10	+	47419201	47419809	True	NR_024495,NR_027634	chr10,chr10	-,+	LOC642826,FAM35B2	-175707,-39548
chr10:47419067-47419990	chr10	+	46937112	46937610	False	NR_027632,NM_181519	chr10,chr10	+,-	FAM35B,SYT15	-39538,33041
chr11:4118369-4119726	chr11	+	4118580	4119747	True	NM_001665,NM_001033	chr11,chr11	-,+	RHOG,RRM1	-256367,-2714
chr12:4134961-4135230	chr12	+	4134965	4135229	True	NM_001759,NM_020367	chr12,chr12	+,-	CCND2,PARP11	247672,-152357
chr12:107350208-107350726	chr12	+	107350234	107350676	True	NM_001033050,NM_152261	chr12,chr12	-,+	MTERFD3,C12orf23	30303,-741
chr4:74847160-74847527	chr4	+	74847296	74847506	True	NM_001511,NM_002619,NM_002704	chr4,chr4,chr4	+,-,-	CXCL1,PF4,PPBP	-112238,259,6451
chr10:131762705-131763066	chr10	+	131762789	131762935	True	NM_001005463,NM_006541	chr10,chr10	-,+	EBF3,GLRX3	-698,171703
chr9:74525831-74526031	chr9	+	74525860	74526056	True	NM_001025780,NM_182505,NM_016014	chr9,chr9,chr9	-,+,-	FAM108B1,C9orf85,FAM108B1	142,366,142
chr19:53236712-53237409	chr19	+	53236847	53237430	True	NR_023311,NM_001161499,NM_001161500,NM_001161501,NM_030972	chr19,chr19,chr19,chr19,chr19	+,-,-,-,-	ZNF137P,ZNF611,ZNF611,ZNF611,ZNF611	-136961,928,928,918,-3712
chr3:28514888-28516410	chr3	+	28515325	28516284	True	NM_001040432,NM_001134433	chr3,chr3	+,-	ZCWPW2,AZI2	-83389,-124707
chr20:35884858-35885299	chr20	+	35884869	35885299	True	NM_021081,NM_001003897,NM_001184731	chr20,chr20,chr20	-,+,-	GHRH,MANBAL,GHRH	50,32751,50
chr5:53156157-53157991	chr5	+	53156494	53157706	True	NR_030307,NM_002495	chr5,chr5	-,+	MIR581,NDUFS4	89779,-300089
chr20:57520816-57521680	chr20	+	57520820	57521470	True	NM_001336,NM_198976	chr20,chr20	-,+	CTSZ,TH1L	60889,34840
chr9:99674405-99674748	chr9	+	99674419	99674471	True	NR_028350,NM_001001662	chr9,chr9	+,-	LOC441454,ZNF782	-3113,-58030
chr6:111138734-111140280	chr6	+	111138998	111140282	True	NM_001634,NM_015076	chr6,chr6	+,-	AMD1,CDK19	55704,-2586
chr6:29864071-29864495	chr6	+	29864189	29864257	True	NR_001317,NR_001434,NR_001318	chr6,chr6,chr6	-,+,+	HCG4P6,HLA-H,HCG2P7	29221,-8857,2550
chr12:12711446-12712870	chr12	+	12711489	12712791	True	NM_001310,NM_030640	chr12,chr12	+,-	CREBL2,DUSP16	52039,2707
chr16:58222346-58223153	chr16	+	58222345	58223201	True	NM_001142302,NM_001896	chr16,chr16	+,-	CCDC113,CSNK2A2	60638,8631
chr12:25100335-25101411	chr12	+	25100622	25101278	True	NM_005504,NM_001204126,NM_001178091,NM_001178092	chr12,chr12,chr12,chr12	-,+,-,-	BCAT1,LRMP,BCAT1,BCAT1	1165,103902,1165,1165
chr4:144435736-144435988	chr4	+	144435756	144436004	True	NM_001168235,NM_003601	chr4,chr4	-,+	FREM3,SMARCA5	185874,-1191
chr4:152329362-152329823	chr4	+	152329383	152329751	True	NM_001128923,NM_001109977	chr4,chr4	-,+	SH3D19,FAM160A1	-181723,646
chr5:133562541-133562843	chr5	+	133562680	133562848	True	NR_037434,NM_002715	chr5,chr5	+,-	MIR3661,PPP2CA	-1283,-730
chr16:57125696-57126106	chr16	+	57125748	57126030	True	NM_152727,NM_024946	chr16,chr16	+,-	CPNE2,FAM192A	424,93996
chr1:65727740-65728750	chr1	+	65727744	65728790	True	NR_029516,NM_014787	chr1,chr1	-,+	MIR101-1,DNAJC6	-203553,1639
chr5:124150849-124152214	chr5	+	124151234	124152257	True	NM_004384,NM_020747	chr5,chr5	+,-	CSNK1G3,ZNF608	-1303492,-70429
chr1:228753449-228753818	chr1	+	228753803	228753867	True	NR_037962,NM_033445	chr1,chr1	+,-	RHOU,HIST3H2A	26526,-108243
chr1:228753449-228753818	chr1	+	228762719	228762783	False	NR_037962,NM_033445	chr1,chr1	+,-	RHOU,HIST3H2A	17610,-117159
chr15:69743831-69744037	chr15	+	69743845	69744093	True	NR_030714,NM_213725,NM_001003	chr15,chr15,chr15	-,+,+	MIR629,RPLP1,RPLP1	627771,1065,1065
chr3:58522280-58522523	chr3	+	58522298	58522483	True	NM_003500,NM_153331	chr3,chr3	-,+	ACOX2,KCTD6	501,-38257
chr20:62284778-62285205	chr20	+	62285083	62285149	True	NM_015894,NM_016434,NR_037882,NM_032957	chr20,chr20,chr20,chr20	-,+,+,+	STMN3,RTEL1,RTEL1-TNFRSF6B,RTEL1	-303,4013,4013,4013
chr7:98923764-98924522	chr7	+	98923819	98924577	True	NM_014891,NM_006409,NM_001190996	chr7,chr7,chr7	-,+,+	PDAP1,ARPC1A,ARPC1A	81786,-374,-374
chr10:43279952-43281073	chr10	+	43279997	43281115	True	NM_014753,NM_006955	chr10,chr10	+,-	BMS1,ZNF33B	-2094,-146005
chr12:104532868-104533320	chr12	+	104532891	104533190	True	NM_006166,NM_013320	chr12,chr12	-,+	NFYB,HCFC2	-851,-74706
chr20:32262900-32263480	chr20	+	32262985	32263505	True	NM_031231,NM_031232,NM_001024675	chr20,chr20,chr20	-,-,+	NECAB3,NECAB3,C20orf134	-721,-721,-8732
chr12:51161225-51162308	chr12	+	51161327	51162017	True	NM_005171,NM_001174130	chr12,chr12	+,-	ATF1,SLC11A2	-3589,241086
chr19:18043560-18043833	chr19	+	18043560	18043792	True	NM_001136203,NM_138442,NM_000215	chr19,chr19,chr19	+,+,-	CCDC124,CCDC124,JAK3	31,2112,-84719
chr10:98945807-98946100	chr10	+	98945806	98945956	True	NM_005479,NM_003061	chr10,chr10	+,-	FRAT1,SLIT1	133065,-123
chr7:14810953-14811678	chr7	+	14811028	14811630	True	NM_001195280,NM_004080	chr7,chr7	+,-	LOC100506049,DGKB	1754874,69495
chr19:1240022-1240224	chr19	+	1240022	1240110	True	NM_001001975,NM_177401,NM_001687,NM_152769	chr19,chr19,chr19,chr19	+,+,+,-	ATP5D,MIDN,ATP5D,C19orf26	1638,8441,1638,-2032
chr20:44163779-44164312	chr20	+	44163807	44164368	True	NM_080827,NM_006103	chr20,chr20	-,+	WFDC6,WFDC2	3823,-65464
chr11:1966693-1967015	chr11	+	1966692	1967008	True	NR_024471,NM_021134	chr11,chr11	-,+	LOC100133545,MRPL23	44192,1493
chr2:85918539-85919689	chr2	+	85918774	85919712	True	NM_198843,NM_012483,NM_006433	chr2,chr2,chr2	-,+,+	SFTPB,GNLY,GNLY	-22910,1701,1701
chr12:98985351-98985898	chr12	+	98985482	98985732	True	NM_005888,NR_003015,NM_002635,NM_213611,NM_201612	chr12,chr12,chr12,chr12,chr12	+,+,+,+,-	SLC25A3,SNORA53,SLC25A3,SLC25A3,IKBIP	1670,7680,1670,1670,52907
chr10:35895433-35895671	chr10	+	35895433	35895706	True	NM_153368,NM_031866	chr10,chr10	+,-	GJD4,FZD8	-1154,34707
chr2:135024177-135025714	chr2	+	135024271	135025571	True	NM_002410,NM_030923	chr2,chr2	+,-	MGAT5,TMEM163	-12492,451050
chr2:32048812-32049894	chr2	+	32048867	32049329	True	NM_014946,NM_001137602	chr2,chr2	+,-	SPAST,MEMO1	239350,186433
chr17:63554704-63555366	chr17	+	63554712	63555319	True	NM_004655,NM_003835	chr17,chr17	-,+	AXIN2,RGS9	2471,-421307
chr13:20136291-20136987	chr13	+	20136525	20136693	True	NM_199254,NM_017520	chr13,chr13	-,+	TPTE2,MPHOSPH8	-25622,71094
chr3:183544958-183545464	chr3	+	183545245	183545513	True	NM_024871,NM_018023	chr3,chr3	-,+	MAP6D1,YEATS2	-1852,-129697
chr16:19180945-19181237	chr16	+	19181000	19181272	True	NM_016524,NM_015092	chr16,chr16	+,-	SYT17,SMG1	-1413,-243274
chr10:17271113-17271365	chr10	+	17271161	17271386	True	NM_003380,NM_004412	chr10,chr10	+,-	VIM,TRDMT1	-954,-27091
chr13:19526644-19528126	chr13	+	19526679	19528171	True	NR_027995,NR_026852	chr13,chr13	-,+	LOC284232,LOC348021	-80570,54227
chr9:32990261-32991217	chr9	+	32990462	32991262	True	NM_001539,NM_001195249	chr9,chr9	+,-	DNAJA1,APTX	33946,10362
chr6:33377988-33378253	chr6_qbl_hap6	+	4610233	4610443	False	NM_001350,NM_002263	chr6_qbl_hap6,chr6_qbl_hap6	-,+	DAXX,KIFC1	-87191,-18744
chr6:33377988-33378253	chr6	+	33378028	33378238	True	NM_002636,NM_001014838,NM_006772,NM_001014433,NM_001014837,NM_001014840,NM_024165,NR_027692,NM_015921	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	+,-,+,-,-,-,+,+,-	PHF1,CUTA,SYNGAP1,CUTA,CUTA,CUTA,PHF1,PHF1,CUTA	534,7877,9608,7877,7877,7877,534,534,7877
chr6:33377988-33378253	chr6_ssto_hap7	+	4858247	4858457	False	NM_002636,NM_001014838,NM_006772,NM_001014433,NM_001014837,NM_001014840,NM_024165,NR_027692	chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7	+,-,+,-,-,-,+,+	PHF1,CUTA,SYNGAP1,CUTA,CUTA,CUTA,PHF1,PHF1	563,7904,9635,7904,7904,7904,563,563
chr14:89056284-89057503	chr14	+	89056505	89057352	True	NM_207662,NM_007039	chr14,chr14	+,-	ZC3H14,PTPN21	3377,-35382
chr11:16424942-16425889	chr11	+	16425014	16425929	True	NM_001145819,NM_014267,NM_017508,NM_001145811	chr11,chr11,chr11,chr11	-,+,-,-	SOX6,C11orf58,SOX6,SOX6	-601,334218,-601,4552
chr1:43824776-43824997	chr1	+	43824871	43824941	True	NM_022821,NM_001255	chr1,chr1	-,+	ELOVL1,CDC20	8808,-296
chr11:56310055-56310669	chr11	+	56310158	56310706	True	NM_001004730,NM_001005245	chr11,chr11	+,-	OR5AR1,OR5M11	120455,77
chr1:43997538-43997897	chr1	+	43997537	43997853	True	NM_002840,NM_031207,NM_130440	chr1,chr1,chr1	+,-,+	PTPRF,HYI,PTPRF	-1041,-77877,-1041
chr2:37572371-37572698	chr2	+	37572505	37572701	True	NM_012413,NM_005813	chr2,chr2	+,-	QPCT,PRKD3	-803,-28283
chr2:27504503-27505045	chr2	+	27504535	27505013	True	NM_003459,NM_173650,NM_187841,NM_032546	chr2,chr2,chr2,chr2	-,+,+,+	SLC30A3,DNAJC5G,TRIM54,TRIM54	-18575,-6297,283,283
chr1:200293956-200294951	chr1	+	200294045	200294773	True	NM_001105517,NM_012482	chr1,chr1	+,-	FAM58B,ZNF281	-111452,84453
chr2:69871757-69872409	chr2	+	69871857	69872453	True	NM_014911,NM_001153	chr2,chr2	-,+	AAK1,ANXA4	-880,96673
chr12:10148786-10149453	chr12	+	10148902	10149490	True	NM_016509,NM_001099431,NM_205852	chr12,chr12,chr12	-,-,+	CLEC1B,CLEC1B,CLEC12B	2460,2460,13740
chr1:38327427-38328778	chr1	+	38327774	38328766	True	NM_198446,NM_005955	chr1,chr1	+,-	C1orf122,MTF1	-54352,-2482
chr1:62661889-62662423	chr1	+	62661963	62662221	True	NM_181712,NM_001164835,NM_019079	chr1,chr1,chr1	-,+,+	KANK4,L1TD1,L1TD1	122912,-1551,-1551
chr1:21672643-21673740	chr1	+	21672831	21673727	True	NM_032264,NM_001113348	chr1,chr1	+,-	NBPF3,ECE1	92903,-797
chr20:2671020-2672037	chr20	+	2671064	2672034	True	NM_174856,NM_001110514	chr20,chr20	-,+	IDH3B,EBF4	-26221,1489
chr13:115000803-115001384	chr13	+	115000881	115001391	True	NM_001078645,NM_003903,NM_007368	chr13,chr13,chr13	+,+,-	CDC16,CDC16,RASA3	-570,-570,-102786
chr11:32816225-32816726	chr11	+	32816225	32816700	True	NM_001008391,NM_024081	chr11,chr11	-,+	CCDC73,PRRG4	-38,34788
chr16:2257459-2257763	chr16	+	2257484	2257750	True	NM_001199174,NM_001199175,NM_001199173,NM_182563,NM_022372,NM_001042371	chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,-,+,-	MLST8,MLST8,MLST8,C16orf79,MLST8,PGP	-1803,-2357,-2357,3369,-2357,7122
chr12:132627257-132627708	chr12	+	132627321	132627628	True	NM_175066,NM_024078	chr12,chr12	-,+	DDX51,NOC4L	1303,1364
chr10:11573443-11574298	chr10	+	11573600	11574337	True	NM_001080491,NM_024693	chr10,chr10	-,+	USP6NL,ECHDC3	9,210018
chr9:35815075-35815539	chr9	+	35815159	35815437	True	NM_001039592,NM_016446,NM_032593,NM_172312	chr9,chr9,chr9,chr9	-,+,-,-	SPAG8,TMEM8B,HINT2,SPAG8	-2900,13784,-117,-2900
chr3:190232179-190232579	chr3	+	190232182	190232453	True	NM_001167928,NM_001167929,NM_001167931,NM_001167930,NM_134470,NM_207316,NM_002182	chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,+,-,+	IL1RAP,IL1RAP,IL1RAP,IL1RAP,IL1RAP,TMEM207,IL1RAP	-393,-393,-393,-393,-393,-64517,-393
chr9:135936346-135937156	chr9	+	135936489	135937103	True	NM_001807,NM_006266	chr9,chr9	+,-	CEL,RALGDS	261,59508
chr11:131244249-131245112	chr11	+	131244254	131244986	True	NM_001048209,NM_014758	chr11,chr11	+,-	NTM,SNX19	-3934,-457872
chr19:7910063-7911052	chr19	+	7910374	7910888	True	NM_001159944,NM_001190467	chr19,chr19	+,-	EVI5L,FLJ22184	497,28488
chr1:19809349-19810900	chr1	+	19809386	19810708	True	NM_001032363,NM_004930	chr1,chr1	+,-	C1orf151,CAPZB	112762,1408
chr6:100002910-100004652	chr6	+	100003151	100004508	True	NM_001013399,NM_001195131	chr6,chr6	-,+	CCNC,LOC100130890	12232,-34339
chr5:71782695-71783005	chr5	+	71782919	71783021	True	NM_024754,NM_152625	chr5,chr5	+,-	PTCD2,ZNF366	-166777,20278
chr12:51664332-51664549	chr12	+	51664396	51664544	True	NM_001136269,NM_001033873,NM_001031628	chr12,chr12,chr12	+,-,-	DAZAP2,SMAGP,SMAGP	-31939,-402,-194
chr3:192953777-192955591	chr3	+	192953859	192955153	True	NR_026877,NM_020386,NM_198505	chr3,chr3,chr3	+,+,-	MGC2889,HRASLS,ATP13A5	4414,3764,141419
chr3:44684891-44685850	chr3	+	44684930	44685693	True	NM_003420,NM_020696	chr3,chr3	+,-	ZNF35,KIAA1143	4539,117539
chr16:29909599-29910600	chr16	+	29909848	29910436	True	NM_012410,NM_001114099,NM_001114100,NM_181718,NM_201575	chr16,chr16,chr16,chr16,chr16	-,-,-,+,-	SEZ6L2,SEZ6L2,SEZ6L2,ASPHD1,SEZ6L2	194,194,194,1710,194
chr9:35564417-35564651	chr9	+	35564482	35564545	True	NM_001099951,NM_001135999,NM_001164310	chr9,chr9,chr9	-,+,-	FAM166B,RUSC2,FAM166B	-586,-25908,-586
chr14:35756658-35757084	chr14	+	35756659	35757115	True	NM_002791,NM_020529	chr14,chr14	+,-	PSMA6,NFKBIA	4458,116895
chr13:103053271-103054015	chr13	+	103053346	103054064	True	NR_036487,NR_036486,NM_175929	chr13,chr13,chr13	+,-,-	LOC283481,LOC283480,FGF14	-6470,-6477,112
chr11:22215339-22215938	chr11	+	22215460	22215965	True	NM_001142649,NM_213599,NM_022725	chr11,chr11,chr11	+,+,-	ANO5,ANO5,FANCF	-789,-789,431473
chr11:35516174-35517146	chr11	+	35516197	35517160	True	NM_014344,NM_001001991	chr11,chr11	+,-	FJX1,PAMR1	122574,30073
chr2:74373924-74374508	chr2	+	74373998	74374546	True	NM_212552,NM_006636,NM_001035505	chr2,chr2,chr2	-,+,-	BOLA3,MTHFD2,BOLA3	543,51143,543
chrX:1455985-1456241	chrY	+	1405995	1406225	False	NM_001636,NM_002183	chrY,chrY	-,+	SLC25A6,IL3RA	54864,-537
chrX:1455985-1456241	chrX	+	1455995	1456225	True	NM_001636,NM_002183	chrX,chrX	-,+	SLC25A6,IL3RA	54864,-537
chr2:165976672-165977405	chr2	+	165976695	165977406	True	NM_001040142,NM_001081676	chr2,chr2	+,-	SCN2A,SCN3A	118505,83222
chr11:18414200-18415093	chr11	+	18414300	18414938	True	NR_028500,NM_001165416,NM_001135239,NM_001165415,NM_005566,NM_181508,NM_001165414	chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,-,+	LDHA,LDHA,LDHA,LDHA,LDHA,HPS5,LDHA	997,997,997,997,997,-70579,2874
chr14:104394146-104394428	chr14	+	104394317	104394459	True	NM_001127393,NM_153046,NM_004894	chr14,chr14,chr14	-,+,-	C14orf2,TDRD9,C14orf2	-6414,357,-6414
chr22:48882561-48884231	chr22	+	48882645	48884050	True	NR_033377,NM_001082967	chr22,chr22	-,+	FLJ46257,FAM19A5	-855327,1237
chr4:1861738-1862508	chr4	+	1861824	1861953	True	NM_012318,NM_001042424	chr4,chr4	-,+	LETM1,WHSC1	-3850,11169
chr4:88342935-88343700	chr4	+	88343131	88343749	True	NM_198038,NM_024047,NM_016245	chr4,chr4,chr4	+,+,-	NUDT9,NUDT9,HSD17B11	11,11,-30676
chr9:140147489-140147723	chr9	+	140147575	140147749	True	NM_001004353,NM_015456,NM_001001710	chr9,chr9,chr9	+,+,-	C9orf173,COBRA1,FAM166A	-1896,2009,-5353
chr9:139092772-139092972	chr9	+	139092847	139093009	True	NM_015597,NM_014564,NM_178138	chr9,chr9,chr9	+,-,-	GPSM1,LHX3,LHX3	128922,2045,3996
chr22:37918269-37918728	chr22	+	37918350	37918760	True	NM_014550,NM_152243	chr22,chr22	-,+	CARD10,CDC42EP1	-3140,37710
chr11:2321768-2322070	chr11	+	2321805	2322063	True	NM_139022,NM_001142946,NR_024621	chr11,chr11,chr11	+,-,-	TSPAN32,C11orf21,C11orf21	1179,1130,1130
chr6:143267452-143267702	chr6	+	143267600	143267668	True	NM_016108,NM_006734	chr6,chr6	+,-	AIG1,HIVEP2	114354,-1262
chr19:51220661-51220994	chr19	+	51220748	51221040	True	NM_016148,NM_002975	chr19,chr19	-,+	SHANK1,CLEC11A	-553,5564
chr2:70315187-70315433	chr2	+	70315192	70315432	True	NM_006196,NR_033872	chr2,chr2	+,-	PCBP1,LOC400960	-658,-1045
chr15:86225333-86226791	chr15	+	86225380	86226613	True	NR_031682,NM_144767	chr15,chr15	-,+	MIR1276,AKAP13	87246,-5163
chr16:65596681-65598037	chr16	+	65596691	65597109	True	NM_001795,NR_027755	chr16,chr16	+,-	CDH5,LOC283867	803415,13156
chr18:67870728-67871817	chr18	+	67870925	67871871	True	NM_173630,NM_004232	chr18,chr18	-,+	RTTN,SOCS6	1148,84265
chr3:49938099-49939811	chr3	+	49938682	49939541	True	NM_001167582,NM_002447	chr3,chr3	+,-	RBM6,MST1R	37935,1815
chr9:33449500-33450032	chr9	+	33449662	33449979	True	NM_004925,NM_002504	chr9,chr9	-,+	AQP3,NFX1	-2072,-159295
chr2:120984079-120984701	chr2	+	120984086	120984745	True	NM_002881,NR_000034	chr2,chr2	+,-	RALB,TMEM185B	25668,-3102
chr1:87792144-87793880	chr1	+	87792143	87793632	True	NM_006769,NM_203341	chr1,chr1	+,-	LMO4,SEP15	518,-412036
chr13:50701259-50701688	chr13	+	50701287	50701677	True	NR_002612,NR_002183	chr13,chr13	-,+	DLEU2,ST13P4	-1610,44476
chr18:8718690-8719290	chr18	+	8718741	8719336	True	NM_015210,NR_024419	chr18,chr18	+,-	KIAA0802,LOC100192426	-1437,-351709
chr8:145018379-145018814	chr8	+	145018579	145018835	True	NM_000837,NR_030383,NM_201379,NM_201384,NM_201381,NM_201380,NM_201383,NM_201382	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	+,-,-,-,-,-,-,-	GRINA,MIR661,PLEC,PLEC,PLEC,PLEC,PLEC,PLEC	45390,662,9303,-4821,120,6259,-1887,-469
chr2:37311747-37312404	chr2	+	37311760	37312266	True	NM_174931,NM_019024	chr2,chr2	+,-	CCDC75,HEATR5B	-217,-275
chr6:53608817-53609249	chr6	+	53609025	53609306	True	NM_018214,NM_001003760	chr6,chr6	+,-	LRRC1,KLHL31	50471,-78519
chr13:99408199-99408767	chr13	+	99408203	99408673	True	NM_005073,NM_001144072	chr13,chr13	-,+	SLC15A1,UBAC2	-3274,444005
chr19:916544-917057	chr19	+	916725	917103	True	NM_138774,NM_005224,NM_032551	chr19,chr19,chr19	-,+,+	C19orf22,ARID3A,KISS1R	-3500,8933,238
chr19:36980899-36981584	chr19	+	36980938	36981339	True	NM_001145344,NM_001145345,NM_032838,NR_036504,NM_001145343	chr19,chr19,chr19,chr19,chr19	-,-,-,+,-	ZNF566,ZNF566,ZNF566,LOC728752,ZNF566	-475,-475,-601,-460,-475
chr22:20310674-20312110	chr22	+	20310774	20311956	True	NR_026919,NM_033257	chr22,chr22	+,-	LOC150197,DGCR6L	-116970,-3146
chr11:45826430-45826686	chr11	+	45826433	45826535	True	NM_018389,NM_001145266,NM_001145265,NM_001080446	chr11,chr11,chr11,chr11	+,+,+,-	SLC35C1,SLC35C1,SLC35C1,C11orf94	105,-861,-861,102348
chr3:114847868-114848128	chr3	+	114847956	114848184	True	NM_001130064,NM_015642	chr3,chr3	+,-	GAP43,ZBTB20	493966,18001
chr12:49463224-49463723	chr12	+	49463258	49463752	True	NM_144593,NM_005430	chr12,chr12	-,+	RHEBL1,WNT1	73,-91073
chr6:14795881-14796711	chr6	+	14795941	14796753	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	449773,866586
chr16:81113261-81113646	chr16	+	81113394	81113495	True	NM_152337,NM_015251,NM_001100873	chr16,chr16,chr16	-,+,-	C16orf46,ATMIN,C16orf46	-2522,-43994,-2522
chr7:102717136-102718564	chr7	+	102717610	102718387	True	NM_001111038,NM_001161012,NM_001161013,NM_001161010,NM_001161011,NM_001161009,NM_031905,NM_145032	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,+,+,+,-	FBXL13,ARMC10,ARMC10,ARMC10,ARMC10,ARMC10,ARMC10,FBXL13	-2322,-2340,-2340,-2340,-2340,-2340,-2340,-2595
chr19:9416990-9417731	chr19	+	9417128	9417582	True	NM_001202406,NM_198535	chr19,chr19	+,-	ZNF559,ZNF699	16865,-1333
chr8:61194132-61195298	chr8	+	61194261	61195316	True	NM_004056,NM_002865	chr8,chr8	-,+	CA8,RAB2A	-307,234242
chr6:39021720-39022594	chr6	+	39021905	39022513	True	NM_002062,NM_018322	chr6,chr6	+,-	GLP1R,C6orf64	-5399,60402
chr19:10681837-10682061	chr19	+	10681884	10681950	True	NM_079421,NM_023008,NR_031603,NM_001800	chr19,chr19,chr19,chr19	-,-,+,-	CDKN2D,KRI1,MIR1238,CDKN2D	-2229,-5182,-19137,-2253
chr19:51293867-51294096	chr19	+	51293938	51294134	True	NR_003068,NM_033068,NR_003067	chr19,chr19,chr19	-,+,-	SNORD88B,ACPT,SNORD88A	8298,-317,8708
chr11:19265945-19267355	chr11	+	19265950	19267109	True	NM_001111018,NM_024680	chr11,chr11	+,-	NAV2,E2F8	105161,-3443
chr12:19283857-19284364	chr12	+	19283940	19284214	True	NM_019012,NM_033123,NM_001143821,NM_001190860	chr12,chr12,chr12,chr12	+,-,+,+	PLEKHA5,PLCZ1,PLEKHA5,PLEKHA5	-1365,-393022,-1365,-1365
chr14:77738456-77739806	chr14	+	77738535	77739829	True	NM_021257,NR_031661	chr14,chr14	-,+	NGB,MIR1260	-880,-6025
chr9:33025768-33026118	chr9	+	33026041	33026165	True	NM_001539,NR_036577	chr9,chr9	+,-	DNAJA1,APTX	-886,-24402
chr15:52403487-52404240	chr15	+	52403638	52404249	True	NM_002748,NM_020396	chr15,chr15	+,-	MAPK6,BCL2L10	-92285,773
chr12:4132611-4132907	chr12	+	4132849	4132915	True	NM_001759,NM_020367	chr12,chr12	+,-	CCND2,PARP11	249986,-150241
chr7:128501498-128501980	chr7	+	128501738	128501860	True	NM_001198909,NM_001195150,NM_004231,NM_001135914	chr7,chr7,chr7,chr7	+,+,+,-	ATP6V1F,LOC100130705,ATP6V1F,KCP	996,4603,996,48963
chr2:95778604-95779787	chr2	+	95778858	95779565	True	NM_031902,NM_001017396	chr2,chr2	-,+	MRPS5,ZNF2	8251,51617
chrX:47931804-47932228	chrX	+	47931829	47931920	True	NM_001190255,NM_001037735,NR_028366,NR_033730	chrX,chrX,chrX,chrX	-,-,+,-	ZNF630,ZNF630,SSX6,ZNF630	-828,-1321,35446,-804
chr1:110306242-110306460	chr1	+	110306241	110306375	True	NM_139053,NM_000851,NM_133181,NM_024526	chr1,chr1,chr1,chr1	-,+,-,-	EPS8L3,GSTM5,EPS8L3,EPS8L3	319,-51428,319,319
chr8:39364149-39364891	chr8	+	39364166	39364937	True	NM_001190956,NR_001569	chr8,chr8	+,-	ADAM18,ADAM3A	77149,15583
chr1:201619780-201620050	chr1	+	201619798	201620064	True	NM_020443,NM_004078	chr1,chr1	+,-	NAV1,CSRP1	-2399,-143411
chr19:58090418-58092180	chr19	+	58090583	58092215	True	NM_001010879,NM_017879	chr19,chr19	+,-	ZIK1,ZNF416	3412,-340
chr12:13041569-13043127	chr12	+	13041629	13043125	True	NM_018654,NM_003979	chr12,chr12	-,+	GPRC5D,GPRC5A	60243,830
chr17:16256322-16256524	chr17	+	16256335	16256423	True	NM_181716,NM_018955	chr17,chr17	-,+	CENPV,UBB	439,27943
chr5:132161910-132163028	chr5	+	132162162	132163024	True	NM_001172700,NM_175873,NM_133456	chr5,chr5,chr5	-,+,-	SHROOM1,ANKRD43,SHROOM1	3616,-13180,-160
chr3:16646452-16646737	chr3	+	16646602	16646684	True	NM_001144382,NM_001351,NM_001190811	chr3,chr3,chr3	+,-,-	PLCL2,DAZL,DAZL	279767,372,-305
chr3:53106867-53107214	chr3	+	53106926	53107198	True	NM_016329,NM_006254	chr3,chr3	-,+	SFMBT1,PRKCD	-26837,88024
chr21:32432747-32433732	chr21	+	32432762	32433717	True	NM_001128077,NM_001099219	chr21,chr21	+,-	KRTAP20-3,KRTAP19-8	-417630,-21967
chr10:127465011-127465560	chr10	+	127465018	127465418	True	NM_147191,NM_078468	chr10,chr10	-,+	MMP21,BCCIP	-628,46685
chr3:133746416-133747502	chr3	+	133746477	133747539	True	NM_021203,NM_005630	chr3,chr3	+,-	SRPRB,SLCO2A1	-243651,1431
chr21:45625165-45626134	chr21	+	45625291	45626053	True	NM_198155,NM_015259	chr21,chr21	+,-	C21orf33,ICOSLG	-71848,34831
chr17:1934574-1935729	chr17	+	1935077	1935741	True	NM_178568,NM_001383,NM_080822	chr17,chr17,chr17	-,+,+	RTN4RL1,DPH1,OVCA2	-6899,-1698,9535
chrX:46696201-46696438	chrX	+	46696246	46696354	True	NM_032591,NM_006915	chrX,chrX	-,+	SLC9A7,RP2	-77774,-8
chr17:38335759-38335985	chr17	+	38335789	38335962	True	NM_016339,NM_021724	chr17,chr17	+,-	RAPGEFL1,NR1D1	-1605,-78816
chr7:44105762-44106696	chr7	+	44105821	44106652	True	NM_000290,NM_014063	chr7,chr7	-,+	PGAM2,DBNL	-635,-21633
chr17:17106969-17108774	chr17	+	17107034	17108638	True	NM_178836,NM_020201	chr17,chr17	-,+	PLD6,NT5M	1058,98041
chr17:73976769-73977990	chr17	+	73976791	73977625	True	NM_001113324,NM_001185039,NM_007292,NR_037709,NM_004035	chr17,chr17,chr17,chr17,chr17	+,-,-,+,-	C17orf106,ACOX1,ACOX1,C17orf106-CDK3,ACOX1	-1544,-1276,-1276,-1544,-1276
chr3:112204179-112204500	chr3	+	112204183	112204392	True	NM_017945,NM_001085357	chr3,chr3	+,-	SLC35A5,BTLA	76502,14075
chr17:34122816-34124062	chr17	+	34122879	34124108	True	NM_001032278,NM_024302,NM_139215	chr17,chr17,chr17	-,-,+	MMP28,MMP28,TAF15	-239,-239,12379
chr1:32226933-32228371	chr1	+	32227197	32228191	True	NM_001703,NR_036216,NM_001525	chr1,chr1,chr1	-,-,+	BAI2,MIR4254,HCRTR1	1507,-2861,-143947
chr5:169729010-169729913	chr5	+	169729016	169729932	True	NM_005565,NR_026945	chr5,chr5	-,+	LCP2,LOC257358	-4194,28502
chr2:27666665-27666895	chr2	+	27666758	27666934	True	NM_177983,NM_173853,NM_001168364	chr2,chr2,chr2	-,+,+	PPM1G,KRTCAP3,KRTCAP3	-34262,-1577,-1577
chrX:149106965-149107498	chrX	+	149106993	149107306	True	NR_027456,NM_001013845	chrX,chrX	+,-	LOC100272228,CXorf40B	-278,-277
chr2:191043240-191044978	chr2	+	191043404	191044907	True	NM_001042519,NM_005259,NM_032321	chr2,chr2,chr2	+,-,+	C2orf88,MSTN,C2orf88	681,-115949,773
chr5:176732933-176733807	chr5	+	176732951	176733690	True	NM_130781,NM_001142935,NM_013237,NM_031300,NM_001031677	chr5,chr5,chr5,chr5,chr5	-,-,+,-,-	RAB24,MXD3,PRELID1,MXD3,RAB24	-2207,5653,-2167,5653,-2207
chr16:56966420-56966688	chr16	+	56966565	56966659	True	NM_001010990,NM_001010989,NM_014685,NM_024946	chr16,chr16,chr16,chr16	+,+,+,-	HERPUD1,HERPUD1,HERPUD1,FAM192A	-868,-868,-868,253367
chr17:49198725-49199348	chr17	+	49198767	49199396	True	NM_001130528,NM_001018136,NM_003971	chr17,chr17,chr17	-,+,-	SPAG9,NME1-NME2,SPAG9	-541,31500,-541
chr22:41074724-41075560	chr22	+	41074767	41075457	True	NM_020831,NM_005297	chr22,chr22	-,+	MKL1,MCHR1	-42077,-68
chr15:40452418-40452876	chr15	+	40452579	40452895	True	NM_001003940,NM_001211	chr15,chr15	-,+	BMF,BUB1B	-51504,314
chr16:16313650-16314472	chr16	+	16313666	16314356	True	NM_001171,NM_001079528,NM_001004067	chr16,chr16,chr16	-,-,+	ABCC6,ABCC6,NOMO3	3022,3022,12032
chr16:16313650-16314472	chr16	+	14914904	14915449	False	NR_023387,NM_014287	chr16,chr16	-,+	ABCC6P2,NOMO1	3161,12193
chr16:16313650-16314472	chr16	-	18585530	18586110	False	NR_003569,NM_173614	chr16,chr16	+,-	ABCC6P1,NOMO2	-3011,-12096
chr15:100104415-100105316	chr15	+	100104432	100105242	True	NM_001171894,NM_001130926,NM_001130927,NM_005587,NM_152449	chr15,chr15,chr15,chr15,chr15	+,+,+,+,-	MEF2A,MEF2A,MEF2A,MEF2A,LYSMD4	890,890,890,890,168434
chrX:49687805-49688780	chrX	+	49687844	49688723	True	NM_001127898,NM_001127899,NR_026742	chrX,chrX,chrX	+,+,-	CLCN5,CLCN5,LOC158572	-670,-670,-43885
chr14:92793588-92794480	chr14	+	92793760	92794400	True	NM_153648,NM_004545,NM_153646,NM_153647	chr14,chr14,chr14,chr14	+,-,+,+	SLC24A4,NDUFB1,SLC24A4,SLC24A4	-4886,-205607,-3659,-4274
chr19:36394682-36395649	chr19	+	36395431	36395681	True	NM_001007469,NM_003332,NM_001173514,NM_001173515,NR_033390,NM_198125,NM_139239,NM_014266	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,-,-,-,-,-,+	HCST,TYROBP,TYROBP,TYROBP,TYROBP,TYROBP,NFKBID,HCST	-2101,3590,3590,3590,3590,3590,-3879,-2101
chr17:6733848-6735221	chr17	+	6734061	6735102	True	NR_002710,NM_053285	chr17,chr17	+,-	ALOX12P2,TEKT1	21792,8
chr1:202312900-202313484	chr1	+	202312910	202313289	True	NM_014176,NM_001167858,NM_002481,NM_001167857	chr1,chr1,chr1,chr1	-,+,+,+	UBE2T,PPP1R12B,PPP1R12B,PPP1R12B	-1816,4540,4540,4540
chr2:134899938-134900567	chr2	+	134899956	134900569	True	NM_207481,NR_037450	chr2,chr2	-,+	NCKAP5,MIR3679	-573925,-15312
chr3:192128194-192129050	chr3	+	192128280	192129046	True	NM_020386,NM_021032	chr3,chr3	+,-	HRASLS,FGF12	829871,-1442
chr1:151584103-151584373	chr1	+	151584110	151584418	True	NM_030918,NM_001172648	chr1,chr1	+,-	SNX27,CELF3	243,104424
chr14:20921616-20922276	chr14	+	20921817	20922328	True	NM_001641,NM_017807,NM_001100814,NM_080649,NM_080648,NM_144568	chr14,chr14,chr14,chr14,chr14,chr14	+,-,-,+,+,-	APEX1,OSGEP,TMEM55B,APEX1,APEX1,TMEM55B	961,999,7369,961,961,7369
chr12:24069651-24070194	chr12	+	24069683	24070090	True	NR_030625,NM_006940	chr12,chr12	+,-	MIR920,SOX5	295264,32611
chr22:21986236-21986587	chr22	+	21986408	21986610	True	NM_152612,NM_001017964,NM_022044	chr22,chr22,chr22	+,-,+	CCDC116,YDJC,SDF2L1	475,-2068,9931
chr10:45497094-45498896	chr10	+	45497100	45498858	True	NM_001039380,NM_006963	chr10,chr10	-,+	C10orf25,ZNF22	-630,-883
chr19:11407434-11407858	chr19	+	11407739	11407873	True	NM_020812,NM_012466	chr19,chr19	-,+	DOCK6,TSPAN16	-34582,-974
chr12:123449888-123450176	chr12	+	123449901	123450201	True	NM_203444,NM_019625,NM_019624,NM_024623	chr12,chr12,chr12,chr12	-,-,-,+	ABCB9,ABCB9,ABCB9,OGFOD2	9601,905,905,9152
chr19:55917320-55918678	chr19	+	55917413	55918139	True	NM_000991,NM_014501	chr19,chr19	+,-	RPL28,UBE2S	-20164,1236
chr9:127707554-127709193	chr9	+	127707977	127709245	True	NM_030978,NM_002077	chr9,chr9	+,-	ARPC5L,GOLGA1	-76554,-4591
chr18:9478836-9479449	chr18	+	9478970	9479066	True	NM_001042388,NM_006788	chr18,chr18	-,+	PPP4R1,RALBP1	135584,-3493
chr9:32552484-32553345	chr9	+	32552617	32553165	True	NM_001195622,NM_005802,NR_033992,NR_033991	chr9,chr9,chr9,chr9	-,-,+,+	TOPORS,TOPORS,LOC100129250,LOC100129250	9,9,-897,-1526
chr19:15620527-15621868	chr19	+	15620531	15621553	True	NM_173483,NM_052890	chr19,chr19	+,-	CYP4F22,PGLYRP2	-1246,-30216
chr2:242627405-242627864	chr2	+	242627405	242627912	True	NM_012145,NR_033255,NM_001165031,NM_032329	chr2,chr2,chr2,chr2	-,-,-,+	DTYMK,DTYMK,DTYMK,ING5	-1022,-1022,-1022,13543
chr19:58613750-58615461	chr19	+	58613992	58615333	True	NM_001145543,NM_007134,NM_001145544,NM_023926	chr19,chr19,chr19,chr19	-,+,-,-	ZSCAN18,ZNF135,ZSCAN18,ZSCAN18	-4262,-43437,-4262,-4262
chr10:90966715-90966928	chr10	+	90966790	90966952	True	NM_003956,NM_001547	chr10,chr10	-,+	CH25H,IFIT2	169,94753
chr22:38304398-38305150	chr22	+	38304674	38305000	True	NM_032561,NM_033386	chr22,chr22	-,+	C22orf23,MICALL1	44653,-2379
chrX:62972703-62974498	chrX	+	62972706	62974444	True	NM_015185,NM_001010888,NM_001173480	chrX,chrX,chrX	-,+,-	ARHGEF9,ZC3H12B,ARHGEF9	637,1734170,637
chr15:52971085-52971327	chr15	+	52971087	52971267	True	NM_002748,NM_019600	chr15,chr15	+,-	MAPK6,KIAA1370	-659727,-267
chr3:133523903-133524670	chr3	+	133523919	133524478	True	NM_016577,NM_021203	chr3,chr3	-,+	RAB6B,SRPRB	90270,-21093
chr11:69289801-69290303	chr11	+	69289807	69290197	True	NM_153451,NM_053056	chr11,chr11	-,+	ORAOV1,CCND1	200018,165675
chr1:24070053-24070265	chr1	+	24070095	24070259	True	NM_003198,NM_001127621	chr1,chr1	+,-	TCEB3,GALE	-290,55851
chr1:202443534-202444933	chr1	+	202443801	202444789	True	NM_014176,NM_032104	chr1,chr1	-,+	UBE2T,PPP1R12B	-132707,-11981
chr1:120190081-120190518	chr1	+	120190135	120190425	True	NM_006623,NM_001080470	chr1,chr1	+,-	PHGDH,ZNF697	63993,15
chr6:146371240-146371971	chr6	+	146371287	146372021	True	NM_001114329,NM_173082	chr6,chr6	+,-	GRM1,SHPRH	-22557,-86054
chr16:56681006-56681701	chr16	+	56681058	56681508	True	NR_003658,NM_005946,NM_005947,NM_005950,NR_027781	chr16,chr16,chr16,chr16,chr16	+,+,+,-,+	MT1DP,MT1A,MT1B,MT1G,MT1DP	-3393,-8531,4302,20519,-3510
chr5:72154586-72155917	chr5	+	72154719	72155827	True	NM_153188,NM_152625	chr5,chr5	+,-	TNPO1,ZNF366	-10848,-351470
chr17:62938696-62940136	chr17	+	62938860	62940063	True	NM_199340,NM_001165933	chr17,chr17	-,+	LRRC37A3,RGS9	-23957,193392
chr10:116396951-116397260	chr10	+	116396954	116397229	True	NM_020940,NM_002313	chr10,chr10	+,-	FAM160B1,ABLIM1	184273,20892
chr7:149411012-149411276	chr7	+	149411036	149411276	True	NM_207336,NM_032534	chr7,chr7	-,+	ZNF467,KRBA1	59069,871
chr14:68004598-68005917	chr14	+	68004699	68005839	True	NM_020715,NM_182526	chr14,chr14	+,-	PLEKHH1,TMEM229B	-4750,-22678
chr5:96087490-96088907	chr5	+	96087512	96088344	True	NR_033798,NM_016442	chr5,chr5	+,-	CAST,ERAP1	-8322,55598
chr10:70657905-70658522	chr10	+	70657917	70658330	True	NM_024045,NM_152707	chr10,chr10	+,-	DDX50,SLC25A16	2703,-370637
chr19:58789083-58789481	chr19	+	58789210	58789427	True	NM_021089,NM_130786	chr19,chr19	+,-	ZNF8,A1BG	890,75489
chr2:150428820-150429472	chr2	+	150428877	150429514	True	NM_015702,NM_194317	chr2,chr2	-,+	MMADHC,LYPD6	14867,-241906
chr20:62438991-62439207	chr20	+	62439022	62439130	True	NM_080622,NM_025224	chr20,chr20	+,-	ABHD16B,ZBTB46	53435,-2166
chr1:173639034-173640423	chr1	+	173639367	173640401	True	NM_001195190,NM_198493	chr1,chr1	+,-	LOC730159,ANKRD45	-34757,-366
chr2:223311187-223312141	chr2	+	223311498	223312158	True	NM_013942,NM_152386	chr2,chr2	-,+	PAX3,SGPP2	-147783,-22227
chr7:50799680-50800005	chr7	+	50799718	50799992	True	NM_001001549,NM_005311,NR_033845	chr7,chr7,chr7	-,-,+	GRB10,GRB10,LOC100129427	108,108,-200316
chr14:53260935-53262805	chr14	+	53261293	53262263	True	NM_198066,NM_145251	chr14,chr14	-,+	GNPNAT1,STYX	-2907,-64468
chr12:71834300-71834803	chr12	+	71834322	71834800	True	NM_003667,NM_144982	chr12,chr12	+,-	LGR5,ZFC3H1	-560,222999
chr1:203735535-203736275	chr1	+	203735645	203736326	True	NM_017773,NR_027902,NM_001136190	chr1,chr1,chr1	+,-,+	LAX1,C1orf157,LAX1	-1426,274123,-1426
chr16:74404990-74405298	chr16	+	74405026	74405204	True	NR_026950,NM_002811	chr16,chr16	-,+	LOC283922,PSMD7	-2873,-74404
chr16:74404990-74405298	chr16	-	70145189	70145267	False	NM_017990,NR_003610	chr16,chr16	+,-	PDPR,PDXDC2P	2261,-45338
chr4:109551148-109551848	chr4	+	109551163	109551723	True	NM_000995,NM_033625,NR_026968	chr4,chr4,chr4	+,+,-	RPL34,RPL34,LOC285456	-9492,-9465,-9550
chr12:89748030-89748396	chr12	+	89748054	89748401	True	NR_028138,NM_022652,NM_001946	chr12,chr12,chr12	+,-,-	LOC338758,DUSP6,DUSP6	354330,-1758,-1758
chr16:67883854-67884198	chr16	+	67883969	67884113	True	NM_025082,NM_020457,NM_005796	chr16,chr16,chr16	-,+,+	CENPT,THAP11,NUTF2	-2608,-7809,-3203
chr1:205012949-205013159	chr1	+	205012960	205013106	True	NM_203376,NM_005076	chr1,chr1	-,+	TMEM81,CNTN2	40532,-671
chr6:66496935-66497674	chr6	+	66497026	66497652	True	NR_026540,NM_001142801	chr6,chr6	+,-	MCART3P,EYS	119,-79908
chr11:61734422-61734711	chr11	+	61734435	61734665	True	NM_004183,NM_002032	chr11,chr11	+,-	BEST1,FTH1	-17130,517
chr5:99724211-99724611	chr5	+	99724350	99724516	True	NM_198507,NR_027503	chr5,chr5	+,-	FAM174A,LOC100133050	146607,-392
chr5:99724211-99724611	chr5	-	98861227	98861393	False	NM_001270,NR_036530	chr5,chr5	-,+	CHD1,LOC100289230	-598989,-596440
chr11:110298719-110300148	chr11	+	110299126	110300179	True	NM_002906,NM_004109	chr11,chr11	-,+	RDX,FDX1	-131689,414
chr4:175173278-175174044	chr4	+	175173597	175173795	True	NM_012180,NM_001040157	chr4,chr4	-,+	FBXO8,KIAA1712	31657,31032
chr1:203056148-203056933	chr1	+	203056181	203056935	True	NM_015053,NM_002479	chr1,chr1	+,-	PPFIA4,MYOG	-35921,-804
chr6:170096932-170097514	chr6	+	170097028	170097488	True	NM_182552,NM_001202550,NM_001029863	chr6,chr6,chr6	-,-,+	WDR27,WDR27,C6orf120	4721,4721,4768
chr4:87533377-87534641	chr4	+	87533577	87534499	True	NM_080685,NM_002753	chr4,chr4	+,-	PTPN13,MAPK10	-18167,-159294
chr15:89456411-89456629	chr15	+	89456603	89456669	True	NM_013227,NM_001114614,NM_005928	chr15,chr15,chr15	+,-,-	ACAN,MFGE8,MFGE8	-109980,44,44
chr8:37352786-37353101	chr8	+	37352922	37353110	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	200190,252504
chr2:27276425-27276901	chr2	+	27276512	27276922	True	NM_001035507,NM_021831,NM_001134693	chr2,chr2,chr2	+,+,-	AGBL5,AGBL5,OST4	-2079,-2079,17695
chr7:110727427-110727957	chr7	+	110727678	110727977	True	NM_018334,NM_032549,NM_001099658,NM_001099660	chr7,chr7,chr7,chr7	+,-,+,+	LRRN3,IMMP2L,LRRN3,LRRN3	3084,474426,3084,3084
chr5:113694901-113695823	chr5	+	113694904	113695862	True	NM_018700,NM_021614	chr5,chr5	-,+	TRIM36,KCNN2	820431,2153
chr7:102259201-102260039	chr7	+	102259389	102259587	True	NM_001079877,NM_001031618,NM_006989	chr7,chr7,chr7	-,+,-	RASA4,SPDYE2,RASA4	-2184,31184,-2184
chr7:102259201-102260039	chr7	-	76695324	76695437	False	NM_006682,NR_028058	chr7,chr7	-,+	FGL2,LOC100132832	133763,-26605
chr7:102259201-102260039	chr7	+	102160429	102160627	False	NM_001031618,NM_006234	chr7,chr7	+,-	SPDYE2,POLR2J	31051,-41048
chr11:102570190-102571333	chr11	+	102570224	102571204	True	NM_001166,NM_022122	chr11,chr11	+,-	BIRC2,MMP27	-352310,5328
chr19:17139436-17139653	chr19	+	17139443	17139697	True	NM_001130065,NM_015692	chr19,chr19	+,-	MYO9B,CPAMD8	46893,-1818
chr20:35402508-35402771	chr20	+	35402554	35402740	True	NM_080628,NM_024918,NM_001145317,NM_001145316,NM_001145315,NM_001145318	chr20,chr20,chr20,chr20,chr20,chr20	+,-,-,-,-,-	C20orf118,DSN1,DSN1,DSN1,DSN1,DSN1	101829,-400,-324,-400,-324,-324
chr6:149960457-149961843	chr6	+	149960778	149961387	True	NM_007044,NM_138785,NM_001204076	chr6,chr6,chr6	-,+,-	KATNA1,C6orf72,KATNA1	8612,-73301,8612
chr7:150498296-150498668	chr7	+	150498555	150498663	True	NM_018487,NM_001101311,NM_001101314,NM_014020,NM_001101312	chr7,chr7,chr7,chr7,chr7	+,-,-,-,-	TMEM176A,TMEM176B,TMEM176B,TMEM176B,TMEM176B	-752,-934,-934,-107,-934
chr1:175037179-175037762	chr1	+	175037226	175037592	True	NR_037606,NM_022093	chr1,chr1	-,+	MRPS14,TNN	-44635,-283
chr12:14517950-14518546	chr12	+	14517985	14518359	True	NM_024829,NM_018179	chr12,chr12	-,+	PLBD1,ATF7IP	202482,251
chr17:45333298-45334695	chr17	+	45333385	45334690	True	NM_000212,NM_001256	chr17,chr17	+,-	ITGB3,CDC27	-2229,-66720
chr15:60297172-60297393	chr15	+	60297183	60297401	True	NM_012182,NM_004330	chr15,chr15	+,-	FOXB1,BNIP2	-813,-315541
chr3:141499475-141499948	chr3	+	141499515	141499974	True	NM_001178140,NM_139209	chr3,chr3	-,+	TFDP2,GRK7	219305,-2523
chr8:42128293-42128532	chr8	+	42128361	42128495	True	NM_001190720,NM_001190721,NM_001190722,NR_033818,NR_033819,NM_033011,NR_033820,NM_001556	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	+,+,+,+,+,-,+,+	IKBKB,IKBKB,IKBKB,IKBKB,IKBKB,PLAT,IKBKB,IKBKB	340,379,324,324,324,-63167,324,324
chr7:128695310-128696227	chr7	+	128695317	128696240	True	NM_001191028,NM_012470,NR_002187,NR_034053	chr7,chr7,chr7,chr7	-,-,+,-	TNPO3,TNPO3,TPI1P2,TNPO3	-90,-90,-91,-90
chr22:23745729-23746093	chr22	+	23745790	23746104	True	NR_033408,NR_003950	chr22,chr22	+,-	FBXW4P1,ZDHHC8P1	-140887,-991
chr17:2239938-2240221	chr17	+	2240007	2240209	True	NR_003072,NR_003073,NM_014853,NM_018128,NM_001098509	chr17,chr17,chr17,chr17,chr17	-,-,+,-,+	SNORD91A,SNORD91B,SGSM2,TSR1,SGSM2	-6343,-7503,596,519,598
chr5:139684140-139685390	chr5	+	139684296	139685184	True	NM_031467,NM_002622	chr5,chr5	+,-	SLC4A9,PFDN1	54602,-1607
chr19:46973323-46973691	chr19	+	46973361	46973647	True	NM_006247,NM_018215,NM_001103149	chr19,chr19,chr19	+,-,-	PPP5C,PNMAL1,PNMAL1	-123161,1223,1223
chr15:92399025-92399582	chr15	+	92399070	92399580	True	NM_013272,NM_001145044,NR_021493	chr15,chr15,chr15	+,+,-	SLCO3A1,SLCO3A1,LOC100144604	-2188,-2188,715963
chr11:77771823-77772767	chr11	+	77772136	77772604	True	NM_001203260,NM_003251	chr11,chr11	-,+	NDUFC2-KCTD14,THRSP	18711,2302
chr2:230136601-230136898	chr2	+	230136601	230136947	True	NM_174899,NM_001100818,NM_017933	chr2,chr2,chr2	+,-,-	FBXO36,PID1,PID1	650259,-544,-544
chr15:40329087-40329302	chr15	+	40329089	40329204	True	NM_001013703,NM_003134	chr15,chr15	+,-	EIF2AK4,SRP14	-102794,2240
chr19:54385792-54386292	chr19	+	54385826	54386076	True	NM_144687,NM_002739	chr19,chr19	-,+	NLRP12,PRKCG	-58178,-410
chr11:64087606-64089050	chr11	+	64087904	64088539	True	NM_181652,NM_012094,NM_016404,NM_181651	chr11,chr11,chr11,chr11	+,+,-,+	PRDX5,PRDX5,TRMT112,PRDX5	-2387,-2387,-2871,-2387
chr14:105045384-105045875	chr14	+	105045396	105045860	True	NM_207379,NM_001008404	chr14,chr14	-,+	TMEM179,C14orf180	25287,195
chr14:58767520-58768932	chr14	+	58767616	58768682	True	NM_023000,NM_023001,NM_002892,NR_029434,NR_029435	chr14,chr14,chr14,chr14,chr14	+,+,+,-,-	ARID4A,ARID4A,ARID4A,FLJ31306,FLJ31306	-2456,-2456,-2456,-2761,-2761
chr17:43683625-43684349	chr17_ctg5_hap1	-	1184169	1184245	False	NR_026901,NR_037772	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LOC644172,CRHR1	4193,-13716
chr17:43683625-43684349	chr17	+	43683762	43684006	True	NR_026901,NR_037772	chr17,chr17	-,+	LOC644172,CRHR1	-4014,13703
chr6:20201165-20201970	chr6	+	20201246	20201817	True	NM_001949,NM_001080480	chr6,chr6	+,-	E2F3,MBOAT1	200319,10914
chr19:14379359-14380439	chr19	+	14379646	14380466	True	NM_014921,NM_001025160	chr19,chr19	-,+	LPHN1,CD97	-62649,111746
chr19:42809589-42810416	chr19	+	42809751	42810243	True	NM_199285,NM_173633,NM_002573,NM_001145939,NM_001145940	chr19,chr19,chr19,chr19,chr19	+,+,-,-,-	PRR19,TMEM145,PAFAH1B3,PAFAH1B3,PAFAH1B3	-3525,7233,-2955,-2822,-2799
chr6:2969097-2970236	chr6	+	2969102	2969984	True	NR_026855,NM_001195291,NM_004568	chr6,chr6,chr6	+,-,-	DKFZP686I15217,SERPINB6,SERPINB6	18216,2468,2468
chr18:15330137-15330458	chr18	+	15330231	15330451	True	NR_027417,NR_036153	chr18,chr18	-,+	LOC644669,MIR3156-2	-4313,-500117
chr3:49138468-49138862	chr3	+	49138515	49138883	True	NM_173546,NM_005051,NM_017730,NM_198880	chr3,chr3,chr3,chr3	+,-,-,-	KLHDC8B,QARS,QRICH1,QRICH1	70134,3338,-7011,-7011
chr7:76038983-76039955	chr7	+	76039146	76040004	True	NM_080744,NM_007155	chr7,chr7	-,+	SRCRB4D,ZP3	-134,-12356
chr5:141030765-141030968	chr5	+	141030920	141030984	True	NM_033449,NM_173828	chr5,chr5	-,+	FCHSD1,RELL2	52,-14454
chr12:56499039-56500729	chr12	+	56499280	56500668	True	NM_001035267,NM_001130420,NM_006191,NM_021104	chr12,chr12,chr12,chr12	+,-,+,+	RPL41,SMARCC2,PA2G4,RPL41	9705,82736,-1240,9705
chr11:57789821-57790769	chr11	+	57790091	57790747	True	NM_001005211,NM_001005212,NM_001005186	chr11,chr11,chr11	-,+,+	OR9I1,OR9Q1,OR6Q1	96219,605,7677
chr9:34655658-34656187	chr9	+	34655679	34656036	True	NM_147162,NM_001142784,NM_000155,NM_004512,NM_006664	chr9,chr9,chr9,chr9,chr9	+,+,+,+,-	IL11RA,IL11RA,GALT,IL11RA,CCL27	-1798,-3548,-9095,-1798,6706
chr10:7831536-7832410	chr10	+	7831538	7832190	True	NM_005174,NM_012311,NM_001001973	chr10,chr10,chr10	+,-,+	ATP5C1,KIN,ATP5C1	-1496,-1594,-1496
chr1:8384934-8385394	chr1	+	8384933	8385439	True	NM_001042682,NM_001080397	chr1,chr1	-,+	RERE,SLC45A1	98358,-600
chrX:50213762-50214271	chrX	+	50213816	50214302	True	NM_033670,NM_001013742	chrX,chrX	+,-	CCNB3,DGKK	-186327,-95
chr3:69434933-69435161	chr3	+	69435033	69435189	True	NM_006407,NM_015123	chr3,chr3	+,-	ARL6IP5,FRMD4B	-300994,291
chr1:229571035-229572396	chr1	+	229571050	229572344	True	NM_006542,NM_001100	chr1,chr1	+,-	SPHAR,ACTA1	-130974,-1207
chr20:25062100-25062307	chr20	+	25062277	25062349	True	NM_014588,NM_001114089,NM_199425	chr20,chr20,chr20	-,+,-	VSX1,ENTPD6,VSX1	468,113989,468
chr1:95538482-95539749	chr1	+	95538505	95539589	True	NM_001199679,NM_144988	chr1,chr1	+,-	TMEM56,ALG14	18483,2
chr1:38258673-38259099	chr1	+	38258729	38259105	True	NM_001031740,NM_152496,NM_001113482,NM_024640	chr1,chr1,chr1,chr1	+,+,+,-	MANEAL,MANEAL,MANEAL,YRDC	668,2054,668,14810
chr2:102997049-102998096	chr2	+	102997313	102998126	True	NM_003855,NM_032718	chr2,chr2	+,-	IL18R1,MFSD9	-18274,355268
chr18:24130642-24130870	chr18	+	24130647	24130885	True	NM_001136205,NR_026908,NM_001142730	chr18,chr18,chr18	-,+,-	KCTD1,C18orf16,KCTD1	-1248,314386,-2147
chr19:48500119-48500417	chr19	+	48500155	48500415	True	NM_022142,NM_001128326	chr19,chr19	+,-	ELSPBP1,BSPH1	-2315,-4728
chr13:45917672-45917882	chr13	+	45917724	45917885	True	NR_002967,NM_003295,NR_024458	chr13,chr13,chr13	-,-,+	SNORA31,TPT1,LOC100190939	-5980,-2427,-2308
chr21:29103393-29105210	chr21	+	29103442	29104933	True	NM_007038,NR_024357	chr21,chr21	-,+	ADAMTS5,NCRNA00113	-764003,-8811
chr14:73602369-73602908	chr14	+	73602404	73602918	True	NM_007318,NM_000021,NM_021260	chr14,chr14,chr14	+,+,-	PSEN1,PSEN1,ZFYVE1	224,224,-108484
chr2:109409675-109410143	chr2	+	109409859	109410044	True	NM_144978,NM_022336	chr2,chr2	+,-	CCDC138,EDAR	-6698,195843
chr1:209892924-209893699	chr1	+	209892981	209893747	True	NM_152485,NM_005525	chr1,chr1	-,+	C1orf74,HSD11B1	64193,-14842
chr11:120972211-120973005	chr11	+	120972214	120973044	True	NM_012101,NM_005422	chr11,chr11	-,+	TRIM29,TECTA	-963351,330
chr1:201620050-201621667	chr1	+	201620338	201621624	True	NM_020443,NM_004078	chr1,chr1	+,-	NAV1,CSRP1	-2939,-143951
chr1:160535529-160537200	chr1	+	160535828	160537226	True	NM_001184879,NM_020335	chr1,chr1	-,+	CD84,VANGL2	12130,-165515
chr12:49449061-49449789	chr12	+	49449140	49449780	True	NM_003482,NM_005430	chr12,chr12	-,+	MLL2,WNT1	-33,-76956
chr16:56458374-56458722	chr16	+	56458444	56458620	True	NM_018233,NM_001144	chr16,chr16	+,-	OGFOD1,AMFR	26803,874
chr7:28449953-28450218	chr7	+	28449957	28450153	True	NM_182898,NM_175061	chr7,chr7	+,-	CREB5,JAZF1	1990,-229520
chr1:114292203-114292833	chr1	+	114292205	114292600	True	NR_037864,NM_006608	chr1,chr1	+,-	LOC100287722,PHTF1	106656,9234
chr9:69381182-69381608	chr9	+	69381215	69381561	True	NM_001085457,NM_001098805	chr9,chr9	-,+	CBWD6,ANKRD20A4	-118622,419
chr9:69381182-69381608	chr9	+	67925995	67926321	False	NR_027422,NM_001012419,NM_032250	chr9,chr9,chr9	-,+,+	FAM27B,ANKRD20A3,ANKRD20A1	-131806,439,439
chr9:69381182-69381608	chr9	-	44118995	44119049	False	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	-488265,-434165
chr9:69381182-69381608	chr9	+	42367593	42367968	False	NR_003670,NM_001012419,NM_001012421	chr9,chr9,chr9	-,+,+	KGFLP2,ANKRD20A3,ANKRD20A2	-348009,334,334
chr9:69381182-69381608	chr9	-	43133963	43134309	False	NM_001012419,NR_026558,NM_001012421	chr9,chr9,chr9	-,+,-	ANKRD20A3,AQP7P3,ANKRD20A2	-419,-275862,-419
chr17:4939574-4941372	chr17	+	4940019	4941124	True	NM_006612,NM_001104577,NM_017986	chr17,chr17,chr17	+,-,-	KIF1C,GPR172B,GPR172B	-38827,-1292,-1292
chr1:156087184-156087715	chr1	+	156087540	156087748	True	NM_001093725,NM_005572,NM_170707,NM_170708	chr1,chr1,chr1,chr1	-,+,+,+	MEX3A,LMNA,LMNA,LMNA	-35751,-3134,-3134,-3134
chr17:7165138-7165389	chr17	+	7165219	7165383	True	NM_015343,NM_001307,NM_203415,NM_203414,NM_203413,NM_015362,NM_001185023,NM_001185022	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,+,+,+,-,-	CTDNEP1,CLDN7,C17orf81,C17orf81,C17orf81,C17orf81,CLDN7,CLDN7	-9960,931,-9898,-9719,-9719,-9719,931,1179
chr9:136246021-136247065	chr9	+	136246087	136246619	True	NM_153710,NM_033161	chr9,chr9	+,-	C9orf96,SURF4	-2854,-3117
chr2:241938860-241939160	chr2	+	241938971	241939193	True	NR_033841,NM_001080437	chr2,chr2	-,+	LOC200772,SNED1	-32103,-767
chr12:96252567-96253079	chr12	+	96252644	96253042	True	NM_003095,NM_021229	chr12,chr12	+,-	SNRPF,NTN4	14,-68108
chr6:152639202-152640090	chr6	+	152639209	152640105	True	NM_025107,NM_015293	chr6,chr6	+,-	MYCT1,SYNE1	378924,-56
chr10:28819773-28820931	chr10	+	28819931	28820808	True	NM_016628,NR_033805,NR_024557,NM_100486	chr10,chr10,chr10,chr10	+,-,+,+	WAC,LOC220906,WAC,WAC	1615,525,618,1615
chr12:14827376-14827863	chr12	+	14827376	14827810	True	NM_177925,NM_004963	chr12,chr12	+,-	H2AFJ,GUCY2C	99459,21759
chr9:139223786-139224586	chr9	+	139223800	139224513	True	NM_015597,NM_001145638,NR_026964	chr9,chr9,chr9	+,+,-	GPSM1,GPSM1,LOC26102	-1919,-1919,-2021
chr6:69345181-69345461	chr6	+	69345237	69345423	True	NM_018368,NM_001704	chr6,chr6	-,+	LMBRD1,BAI3	1161676,208
chr1:39956298-39956548	chr1	+	39956313	39956523	True	NR_003929,NM_181809	chr1,chr1	-,+	PPIEL,BMP8A	68897,794
chr1:39956298-39956548	chr1	-	40255236	40255286	False	NM_001720,NM_001195007	chr1,chr1	-,+	BMP8B,PPIE	-703,-50770
chr8:42752755-42753005	chr8	+	42752813	42753019	True	NM_001160223,NM_001160224,NM_032410,NM_030954,NM_001160225,NR_027669,NR_027668	chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,+,-,-,-,-	RNF170,RNF170,HOOK3,RNF170,RNF170,RNF170,RNF170	-947,-947,-831,-947,-947,-947,-947
chr4:171014145-171014503	chr4	+	171014145	171014320	True	NM_016228,NM_182662,NM_173872	chr4,chr4,chr4	-,-,+	AADAT,AADAT,CLCN3	-2962,-2773,-472478
chr13:67804322-67804530	chr13	+	67804322	67804515	True	NR_002717,NM_020403,NM_203487	chr13,chr13,chr13	+,-,-	ATXN8OS,PCDH9,PCDH9	2876829,4,4
chr21:33671484-33672958	chr21	+	33671572	33672958	True	NM_206898,NM_018944,NM_178817	chr21,chr21,chr21	+,-,+	MRAP,MIS18A,MRAP	-7507,-20196,-7507
chr17:63817035-63817828	chr17	+	63817039	63817356	True	NM_002737,NM_001037325	chr17,chr17	+,-	PRKCA,CCDC46	481569,5367
chr19:10533714-10533925	chr19	+	10533755	10533838	True	NM_007065,NM_001111307,NM_001111309,NM_001111308	chr19,chr19,chr19,chr19	-,+,+,+	CDC37,PDE4A,PDE4A,PDE4A	-19484,-2473,9272,7682
chr8:8559990-8560298	chr8	+	8560006	8560318	True	NM_004225,NM_194284	chr8,chr8	-,+	MFHAS1,CLDN23	190863,-391
chr1:28652821-28654097	chr1	+	28653253	28653898	True	NM_014280,NM_017638,NM_001127350	chr1,chr1,chr1	-,+,+	DNAJC8,MED18,MED18	-93711,1614,1614
chr13:42030068-42031443	chr13	+	42030072	42031060	True	NM_014059,NM_004294	chr13,chr13	+,-	C13orf15,MTRF1	481,-192359
chr16:89785667-89785986	chr16	+	89785699	89786023	True	NM_152287,NR_036480,NM_001113525,NM_004913	chr16,chr16,chr16,chr16	+,+,+,-	ZNF276,LOC100128881,ZNF276,C16orf7	1369,-7486,1928,1421
chrX:35975180-35976385	chrX	+	35975362	35976215	True	NM_152632,NM_031442	chrX,chrX	+,-	CXorf22,TMEM47	-37563,-1299957
chr19:42126435-42127220	chr19	+	42126567	42127201	True	NM_033543,NM_001817	chr19,chr19	+,-	CEACAM21,CEACAM4	-44087,6291
chr9:90591310-90591864	chr9	+	90591477	90591787	True	NM_001039803,NM_001145124,NM_001170640,NM_178432,NM_001170639,NM_012119	chr9,chr9,chr9,chr9,chr9,chr9	-,+,-,-,-,-	CDK20,FAM75C1,CDK20,CDK20,CDK20,CDK20	-1782,-58658,-1782,-1782,-1782,-1782
chr11:62496488-62496961	chr11	+	62496510	62496733	True	NM_001079559,NR_037946,NM_173810	chr11,chr11,chr11	-,-,+	HNRNPUL2,HNRNPUL2-BSCL2,TTC9C	-1653,-1654,-616
chr14:50778806-50779044	chr14	+	50778806	50779052	True	NR_033761,NM_024884,NM_001003805,NM_001003803,NM_015684	chr14,chr14,chr14,chr14,chr14	+,-,+,+,+	ATP5S,L2HGDH,ATP5S,ATP5S,ATP5S	-6,51,-6,-6,-6
chr2:203738319-203738832	chr2	+	203738421	203738636	True	NM_138468,NM_001104586,NM_178231	chr2,chr2,chr2	-,+,-	ICA1L,ALS2CR8,ICA1L	-2050,38341,-2226
chr19:18528667-18529168	chr19	+	18528861	18529119	True	NM_032627,NM_001170939,NM_001009998	chr19,chr19,chr19	+,-,+	SSBP4,ISYNA1,SSBP4	1026,19852,1026
chr19:5905105-5905589	chr19	+	5905176	5905306	True	NR_034166,NM_001193375,NM_001017921,NM_175614,NM_004058,NM_080590	chr19,chr19,chr19,chr19,chr19,chr19	-,-,+,-,+,+	NDUFA11,NDUFA11,VMAC,NDUFA11,CAPS,CAPS	-1152,-1152,-377,-1152,8886,8886
chr20:4661289-4662757	chr20	+	4661291	4662548	True	NM_000311,NM_001080121,NM_001080122,NM_001080123,NM_183079,NR_024267	chr20,chr20,chr20,chr20,chr20,chr20	+,+,+,+,+,-	PRNP,PRNP,PRNP,PRNP,PRNP,PRNT	4248,4248,4248,4608,4248,58816
chr19:10304420-10304820	chr19	+	10304464	10304866	True	NM_001130823,NR_036206,NM_001379	chr19,chr19,chr19	-,+,-	DNMT1,MIR4322,DNMT1	939,36222,939
chr1:40845309-40846292	chr1	+	40845526	40846029	True	NM_022733,NM_001198978,NM_001852	chr1,chr1,chr1	+,+,-	SMAP2,SMAP2,COL9A2	-6201,-5274,-62587
chr2:26984995-26985556	chr2	+	26985408	26985586	True	NM_017877,NM_001029881	chr2,chr2	+,-	C2orf18,CIB4	1555,-121197
chr7:75113572-75114665	chr7	+	75113586	75114685	True	NM_001099415,NM_001099435	chr7,chr7	-,+	POM121C,SPDYE5	933,9613
chr7:75113572-75114665	chr7	-	102005315	102006021	False	NM_024653,NM_001146210	chr7,chr7	+,-	PRKRIP1,SPDYE6	30782,-8426
chr7:75113572-75114665	chr7	-	76179635	76180727	False	NR_029411,NM_012230,NR_003262	chr7,chr7,chr7	+,-,-	LOC100133091,POMZP3,FDPSL2A	-1028,75944,-75318
chr7:75113572-75114665	chr7	-	72350913	72352010	False	NR_003666,NM_172020	chr7,chr7	-,+	SPDYE7P,POM121	-11258,-1028
chr15:83314541-83315188	chr15	+	83314650	83315192	True	NM_030594,NR_003011	chr15,chr15	-,+	CPEB1,SCARNA15	1586,109504
chr10:51371601-51373246	chr10	+	51371668	51373282	True	NM_003631,NR_029388,NM_002443	chr10,chr10,chr10	-,-,+	PARG,LOC728407,MSMB	-337,-352,176270
chr10:51371601-51373246	chr10	-	51621469	51622818	False	NM_001145262,NM_006327	chr10,chr10	+,-	NCOA4,TIMM23	-45236,568
chr3:150418529-150420154	chr3	+	150418717	150419729	True	NM_016275,NM_152394	chr3,chr3	+,-	SELT,FAM194A	-97713,2074
chr1:227059541-227060732	chr1	+	227059718	227060574	True	NM_002221,NM_012486,NM_000447	chr1,chr1,chr1	-,+,+	ITPKB,PSEN2,PSEN2	-132842,-1496,-1496
chr8:22464809-22465139	chr8	+	22464826	22464984	True	NM_001013842,NM_173686,NR_027715,NM_021174,NR_033902,NM_001198827	chr8,chr8,chr8,chr8,chr8,chr8	+,+,-,+,+,+	C8orf58,C8orf58,FLJ14107,KIAA1967,KIAA1967,C8orf58	-7763,-7763,34792,-2338,-2732,-7763
chr7:155090906-155092304	chr7	+	155090937	155092262	True	NM_001103176,NM_005542,NM_198337,NM_198336	chr7,chr7,chr7,chr7	-,+,+,+	CNPY1,INSIG1,INSIG1,INSIG1	234328,-1502,-1502,-1502
chrX:2743417-2743955	chrX	+	2743494	2743820	True	NM_001184703,NM_001184702,NM_001184704,NM_003918,NM_001079855,NM_001669	chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,-	GYG2,GYG2,GYG2,GYG2,GYG2,ARSD	3042,3042,3042,3042,3042,103622
chr3:143546735-143548110	chr3	+	143546764	143548048	True	NM_173653,NM_173552	chr3,chr3	-,+	SLC9A9,C3orf58	19375,142591
chr16:33944058-33944471	chr16	+	33944147	33944469	True	NR_027080,NR_002837	chr16,chr16	+,-	LOC283914,UBE2MP1	653317,460343
chr2:122288211-122289025	chr2	+	122288219	122288858	True	NR_023343,NM_001142273	chr2,chr2	+,-	RNU4ATAC,CLASP1	56,118244
chr5:43396820-43397272	chr5	+	43396885	43397253	True	NM_153361,NM_148672	chr5,chr5	+,-	MGC42105,CCL28	-204609,15285
chr3:12409839-12410913	chr3	+	12410121	12410720	True	NM_001195279,NM_015869	chr3,chr3	-,+	LOC100129480,PPARG	176304,-17178
chr11:67158535-67158931	chr11	+	67158697	67158943	True	NM_001008709,NM_004584	chr11,chr11	-,+	PPP1CA,RAD9A	10483,479
chr5:41931051-41932831	chr5	+	41931076	41932689	True	NM_033484,NM_012176,NM_000436	chr5,chr5,chr5	+,+,-	FBXO4,FBXO4,OXCT1	-5778,-5778,-60285
chr6:44101420-44102570	chr6	+	44101576	44102552	True	NM_018426,NM_032111	chr6,chr6	+,-	TMEM63B,MRPL14	-6251,-6385
chr12:54867012-54867276	chr12	+	54867150	54867307	True	NM_005337,NM_144594	chr12,chr12	+,-	NCKAP1L,GTSF1	24187,130
chr4:48341860-48343091	chr4	+	48341954	48343063	True	NM_020846,NM_003215	chr4,chr4	+,-	SLAIN2,TEC	549,-70140
chrX:153637911-153638430	chrX	+	153638020	153638278	True	NM_001009932,NM_001009933,NM_001009934,NM_000116,NM_006730,NM_181313,NM_181312,NM_181311,NR_000011,NR_024048	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,+,-,+,+,+,+,+	DNASE1L1,DNASE1L1,DNASE1L1,TAZ,DNASE1L1,TAZ,TAZ,TAZ,SNORA70,TAZ	2207,2207,2207,1598,-445,1598,1598,1598,-9449,1598
chr7:15725588-15726174	chr7	+	15725914	15726184	True	NM_001195280,NM_005924	chr7,chr7	+,-	LOC100506049,MEOX2	840320,174
chr2:68436710-68438394	chr2	+	68436883	68437760	True	NM_000945,NM_020143	chr2,chr2	-,+	PPP3R1,PNO1	41950,-51929
chr1:6241522-6242217	chr1	+	6241690	6242000	True	NM_207396,NM_015557	chr1,chr1	+,-	RNF207,CHD5	24188,-1496
chr1:17866995-17867331	chr1	+	17866996	17867230	True	NM_018125,NM_018715	chr1,chr1	+,-	ARHGEF10L,RCC2	-717,-100776
chr22:19948865-19949657	chr22	+	19948869	19949557	True	NM_001135162,NM_007310,NM_006440	chr22,chr22,chr22	+,+,-	COMT,COMT,TXNRD2	-9875,512,-19510
chr10:99495159-99496360	chr10	+	99495233	99496348	True	NM_001002261,NM_001002262,NM_001174119,NM_001174120,NM_001174121,NM_001174122,NM_144588,NR_026754	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,+,+,-	ZFYVE27,ZFYVE27,ZFYVE27,ZFYVE27,ZFYVE27,ZFYVE27,ZFYVE27,LOC100270710	1885,529,529,529,529,529,529,-17331
chr19:4866503-4867010	chr19	+	4866514	4866982	True	NM_005817,NM_001048201,NM_001164189,NM_001164194	chr19,chr19,chr19,chr19	-,+,-,-	PLIN3,UHRF1,PLIN3,PLIN3	848,42527,848,848
chr16:69162109-69163053	chr16	+	69162142	69163051	True	NM_001039690,NR_033227,NM_001040146,NM_032830	chr16,chr16,chr16,chr16	-,-,-,+	CHTF8,CHTF8,CHTF8,CIRH1A	3492,3492,3061,3447
chr15:68117593-68117851	chr15	+	68117601	68117895	True	NM_001031807,NM_001031733	chr15,chr15	+,-	SKOR1,CALML4	45,380603
chr12:113624698-113625452	chr12	+	113624867	113625294	True	NM_024072,NM_001111322,NM_032848	chr12,chr12,chr12	-,-,+	DDX54,DDX54,C12orf52	-1583,-1583,-1363
chr7:128167306-128168665	chr7	+	128167713	128167782	True	NM_183243,NM_018396	chr7,chr7	-,+	IMPDH1,METTL2B	-117677,-50988
chr8:144814408-144815273	chr8	+	144814817	144815247	True	NM_198488,NR_033849	chr8,chr8	-,+	FAM83H,LOC100128338	717,1062
chr1:43826958-43828003	chr1	+	43827047	43828015	True	NM_022821,NM_001255	chr1,chr1	-,+	ELOVL1,CDC20	5734,-2472
chr10:30639317-30640227	chr10	+	30639316	30640065	True	NM_018109,NM_005204	chr10,chr10	-,+	MTPAP,MAP3K8	-1049,82800
chr1:161408912-161409592	chr1	+	161408940	161409378	True	NM_001136219,NM_001013625	chr1,chr1	+,-	FCGR2A,C1orf192	65826,-71276
chr14:103762882-103763444	chr14	+	103763095	103763492	True	NR_033938,NM_001969	chr14,chr14	-,+	LOC100131366,EIF5	-107730,37000
chr6:85475377-85475894	chr6	+	85475733	85475915	True	NM_001204813,NM_001080508	chr6,chr6	+,-	NT5E,TBX18	683386,-1834
chrX:47859464-47859680	chrX	+	47859595	47859663	True	NM_001007088,NM_205856,NM_006962,NM_001178099,NM_001079900	chrX,chrX,chrX,chrX,chrX	-,+,-,-,+	ZNF182,SPACA5,ZNF182,ZNF182,SPACA5B	3772,4070,3772,3789,7506
chr3:23958326-23958529	chr3	+	23958352	23958556	True	NM_002948,NM_020345	chr3,chr3	+,-	RPL15,NKIRAS1	82,31
chr7:128826342-128828064	chr7	+	128827065	128828021	True	NM_005631,NR_034053	chr7,chr7	+,-	SMO,TNPO3	691,-131838
chr2:219853460-219854988	chr2	+	219853618	219854960	True	NM_057093,NM_005209,NM_057094,NM_017521,NR_024385	chr2,chr2,chr2,chr2,chr2	-,-,-,-,+	CRYBA2,CRYBA2,CRYBA2,FEV,LOC151300	3217,3211,3217,-3239,-12663
chr2:173028920-173029872	chr2	+	173029165	173029843	True	NM_178120,NM_004405	chr2,chr2	+,-	DLX1,DLX2	-79021,-61687
chr9:41998251-41999298	chr9	+	41998282	41998763	True	NR_003670,NM_001012421	chr9,chr9	-,+	KGFLP2,ANKRD20A2	20880,369539
chr9:41998251-41999298	chr9	+	46823041	46823522	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-3192311,-135532
chr9:41998251-41999298	chr9	-	46708274	46708755	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-3077544,-20768
chr9:41998251-41999298	chr9	-	44266269	44266334	False	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	-635539,-581444
chr9:41998251-41999298	chr9	+	44381134	44381615	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	608620,-750404
chr12:121791536-121791882	chr12	+	121791641	121791725	True	NM_001137559,NM_016237,NM_025126	chr12,chr12,chr12	-,-,+	ANAPC5,ANAPC5,RNF34	337,-1376,46176
chr17:40436821-40437957	chr17	+	40436881	40437920	True	NM_012448,NM_003152	chr17,chr17	-,+	STAT5B,STAT5A	-8457,1644
chr19:40434014-40434465	chr19	+	40434021	40434431	True	NM_003890,NM_006503	chr19,chr19	-,+	FCGBP,PSMC4	6152,42641
chr19:13904292-13904938	chr19	+	13904599	13904951	True	NR_036515,NM_023072	chr19,chr19	-,+	LOC284454,ZSWIM4	42202,1322
chr3:187926188-187926407	chr3	+	187926190	187926426	True	NM_005578,NR_036497	chr3,chr3	+,-	LPP,LOC339929	4294,-54314
chr7:158624256-158624487	chr7	+	158624282	158624516	True	NM_018051,NM_020728	chr7,chr7	+,-	WDR60,ESYT2	24752,-1963
chr1:12775953-12776414	chr1	+	12776083	12776451	True	NM_004753,NM_001103169,NM_001103170	chr1,chr1,chr1	-,+,+	DHRS3,AADACL3,AADACL3	-98263,-16,-16
chr9:95571025-95571250	chr9	+	95571103	95571251	True	NM_015250,NR_026868	chr9,chr9	-,+	BICD2,ANKRD19	-44020,641
chr2:127415135-127415588	chr2	+	127415185	127415563	True	NM_002101,NM_016815,NM_139348	chr2,chr2,chr2	+,+,-	GYPC,GYPC,BIN1	-1552,-1552,449351
chr14:45553767-45555237	chr14	+	45553835	45555028	True	NM_017922,NM_002013	chr14,chr14	+,-	PRPF39,FKBP3	-585,48761
chr9:79522037-79523714	chr9	+	79522175	79523519	True	NM_001013735,NM_015225	chr9,chr9	+,-	FOXB2,PRUNE2	111051,-1172
chr3:125495639-125496145	chr7	-	97548482	97548532	True	NM_013998,NM_183356	chr7,chr7	+,-	TAC1,ASNS	-187262,-46628
chr9:65493242-65493788	chr9	+	65493720	65493830	True	NR_026802,NR_024496,NR_027461	chr9,chr9,chr9	-,+,-	FAM74A4,LOC442421,FAM74A2	606,1000438,606
chr9:65493242-65493788	chr9	+	43614833	43614977	False	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	15871,69907
chr9:65493242-65493788	chr9	-	40716107	40716217	False	NR_026801,NM_033160	chr9,chr9	+,-	FAM74A3,ZNF658	-634,75945
chr9:65493242-65493788	chr9	-	41516463	41516573	False	NM_001113541,NR_027861	chr9,chr9	+,-	FAM75A5,ZNF658B	-15835,75684
chr16:4557300-4557820	chr16	+	4557463	4557859	True	NM_001199054,NM_001127205	chr16,chr16	-,+	C16orf5,HMOX2	30662,-11666
chr6:80731175-80732159	chr6	+	80731371	80732199	True	NM_022726,NM_003318	chr6,chr6	-,+	ELOVL4,TTK	-74056,-17113
chr14:99737688-99738004	chr14	+	99737929	99738031	True	NM_022898,NM_001099402,NM_138576	chr14,chr14,chr14	-,+,-	BCL11B,CCNK,BCL11B	-107,209707,-107
chr9:35689083-35689619	chr9	+	35689169	35689445	True	NM_001216,NM_003289,NM_213674	chr9,chr9,chr9	+,-,-	CA9,TPM2,TPM2	-15305,658,658
chr3:138066728-138067051	chr3	+	138066799	138067097	True	NM_012219,NM_001085049,NM_178130	chr3,chr3,chr3	+,+,-	MRAS,MRAS,TXNDC6	-225,410,-18071
chr2:220033547-220034052	chr2	+	220033580	220033994	True	NM_015680,NM_024782,NM_001144890,NM_144712,NM_001144889,NM_024293	chr2,chr2,chr2,chr2,chr2,chr2	-,-,-,-,-,+	CNPPD1,NHEJ1,SLC23A3,SLC23A3,SLC23A3,FAM134A	7758,-7993,873,873,873,8944
chr1:110614477-110615666	chr1	+	110614651	110615700	True	NM_033088,NM_006492	chr1,chr1	+,-	FAM40A,ALX3	-37469,-1329
chr12:78263866-78264824	chr12	+	78264214	78264858	True	NM_203394,NM_014903	chr12,chr12	-,+	E2F7,NAV3	-804854,-39202
chr3:141942893-141943822	chr3	+	141943400	141943771	True	NM_001679,NM_001039547,NR_033289	chr3,chr3,chr3	+,-,-	ATP1B3,GK5,GK5	-347981,729,729
chr17:61525820-61526414	chr17	+	61525972	61526366	True	NM_001017917,NM_001915,NM_000789,NM_001017916	chr17,chr17,chr17,chr17	-,-,+,-	CYB561,CYB561,ACE,CYB561	-7765,-2250,28055,-2427
chr11:10551594-10552776	chr11	+	10551682	10552576	True	NM_016422,NR_034094	chr11,chr11	-,+	RNF141,LOC100129827	10262,10210
chr17:4459406-4460228	chr17	+	4459521	4460251	True	NM_198501,NM_001122890,NM_014520,NM_153338,NM_001105538	chr17,chr17,chr17,chr17,chr17	+,-,-,-,-	SMTNL2,GGT6,MYBBP1A,GGT6,MYBBP1A	27024,3675,-840,3675,-840
chr9:86319663-86320451	chr9	+	86319903	86320134	True	NM_053067,NM_013438,NM_001190727	chr9,chr9,chr9	-,-,+	UBQLN1,UBQLN1,C9orf103	3093,3093,-81928
chr11:118828953-118829435	chr11	+	118829152	118829331	True	NM_006760,NR_003040	chr11,chr11	+,-	UPK2,RPL23AP64	-2195,45022
chr7:31093154-31094365	chr7	+	31093485	31094347	True	NM_022728,NM_001199635,NM_001199637,NM_001118,NM_001199636	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	NEUROD6,ADCYAP1R1,ADCYAP1R1,ADCYAP1R1,ADCYAP1R1	286241,-1460,-1460,-1460,-1460
chr17:43223086-43224554	chr17	+	43223198	43224392	True	NM_133373,NM_006460	chr17,chr17	-,+	PLCD3,HEXIM1	-13307,291
chr7:7541684-7542487	chr7	+	7541829	7542219	True	NM_001037763,NM_019005	chr7,chr7	-,+	COL28A1,MIOS	33291,64396
chr12:12504834-12505436	chr12	+	12504872	12505472	True	NM_058169,NM_018050,NR_024061	chr12,chr12,chr12	+,-,-	LOH12CR1,MANSC1,LOH12CR2	4547,-1703,4580
chr11:9012770-9014177	chr11	+	9013158	9013928	True	NM_182901,NM_020645	chr11,chr11	+,-	C11orf17,NRIP3	-80414,11718
chr6:50785332-50786075	chr6	+	50785435	50786110	True	NM_001037498,NM_003221	chr6,chr6	-,+	DEFB112,TFAP2B	-769071,328
chr1:217260908-217262025	chr1	+	217260908	217262062	True	NM_138796,NM_206595,NM_206594	chr1,chr1,chr1	+,-,-	SPATA17,ESRRG,ESRRG	542632,965,965
chr6:82798329-82800070	chr6	+	82798570	82799430	True	NM_006670,NM_015525	chr6,chr6	+,-	TPBG,IBTK	273492,158068
chr11:3817964-3818303	chr11	+	3818021	3818267	True	NM_005387,NM_139131,NM_139132,NR_027017,NR_027014,NR_027015,NM_001145438,NM_016320	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,+,+,+,+,-	NUP98,NUP98,NUP98,PGAP2,PGAP2,PGAP2,PGAP2,NUP98	805,805,805,922,686,864,781,805
chr17:39622249-39623326	chr17	+	39622351	39623071	True	NM_030975,NM_002278	chr17,chr17	+,-	KRTAP9-9,KRT32	-210766,617
chr8:145731708-145732078	chr8	+	145731899	145732011	True	NM_032902,NM_005309,NM_004260,NM_138431	chr8,chr8,chr8,chr8	+,+,-,+	PPP1R16A,GPT,RECQL4,MFSD3	-9841,-2485,11249,2540
chr22:39885028-39885327	chr22	+	39885081	39885205	True	NM_001098270,NM_194326	chr22,chr22	+,-	MGAT3,RPS19BP1	-1903,43705
chr1:43257442-43258493	chr1	+	43257898	43258520	True	NM_022356,NM_199342,NM_001017922	chr1,chr1,chr1	-,-,+	LEPRE1,CCDC23,ERMAP	-25143,24589,24255
chr10:99481812-99482124	chr10	+	99481932	99482079	True	NR_026754,NM_031484	chr10,chr10	-,+	LOC100270710,MARVELD1	-4030,-8519
chr14:53166603-53168514	chr14	+	53166960	53168250	True	NM_002806,NM_014584	chr14,chr14	+,-	PSMC6,ERO1L	5645,-4541
chr19:29436278-29437719	chr19	+	29436501	29437757	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	18280,266429
chr1:205475841-205476185	chr1	+	205475845	205476231	True	NM_212503,NM_002596,NR_027086,NM_212502	chr1,chr1,chr1,chr1	+,+,-,+	CDK18,CDK18,LOC284578,CDK18	-2212,-2212,49582,-2212
chr14:90426632-90427997	chr14	+	90426663	90427952	True	NM_145231,NM_018319,NM_001008744	chr14,chr14,chr14	-,+,+	EFCAB11,TDP1,TDP1	-5574,-4476,-4476
chr2:74604160-74605330	chr2	+	74604202	74605258	True	NM_001135040,NM_001135041,NM_023019,NM_001190837,NR_024463,NM_004082	chr2,chr2,chr2,chr2,chr2,chr2	-,-,-,-,+,-	DCTN1,DCTN1,DCTN1,DCTN1,LOC100189589,DCTN1	2274,-2340,-2340,2274,7586,2274
chr17:55123994-55124447	chr17	+	55124056	55124346	True	NM_004645,NR_002818	chr17,chr17	-,+	COIL,RNF126P1	-85645,-1269
chr8:23144744-23145593	chr8	+	23144786	23145492	True	NM_001136108,NM_003844	chr8,chr8	+,-	R3HCC1,TNFRSF10A	119,-62106
chr17:73720306-73720556	chr17	+	73720310	73720544	True	NM_000154,NM_000213,NM_001005619,NM_001005731	chr17,chr17,chr17,chr17	-,+,+,+	GALK1,ITGB4,ITGB4,ITGB4	40786,-2845,231,-2845
chrX:77041551-77042038	chrX	+	77041550	77042055	True	NM_138270,NM_001866,NM_000489	chrX,chrX,chrX	-,+,-	ATRX,COX7B,ATRX	-15,112905,-15
chr10:73080667-73081820	chr10	+	73080790	73081584	True	NM_001174098,NM_018344,NR_033414,NR_033413,NM_001164375	chr10,chr10,chr10,chr10,chr10	+,+,+,+,-	SLC29A3,SLC29A3,SLC29A3,SLC29A3,C10orf105	-1838,-1838,-1838,-1838,398044
chr19:6336070-6336803	chr19	+	6336305	6336533	True	NM_006012,NM_133492	chr19,chr19	+,-	CLPP,ACER1	24929,-2665
chr3:12880900-12881670	chr3	+	12881036	12881578	True	NM_001007073,NM_012298,NR_002582,NM_000994,NM_001007074	chr3,chr3,chr3,chr3,chr3	-,+,-,-,-	RPL32,CAND2,SNORA7A,RPL32,RPL32	1553,-42916,421,1553,421
chr18:48405974-48406219	chr18	+	48406057	48406267	True	NM_001168335,NM_002396,NM_001127174	chr18,chr18,chr18	+,+,-	ME2,ME2,MRO	-676,-676,-54303
chr17:61562645-61562861	chr17	+	61562649	61562735	True	NM_152830,NM_001915,NM_000789,NM_001178057	chr17,chr17,chr17,chr17	+,-,+,+	ACE,CYB561,ACE,ACE	-522,-38927,-8278,-522
chr9:46269096-46269694	chr4	-	3551859	3551935	False	NM_002337,NM_173660	chr4,chr4	-,+	LRPAP1,DOK7	-17635,-86877
chr9:46269096-46269694	chr9	+	46269401	46269525	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2638671,418040
chr9:46269096-46269694	chr9	+	67678360	67678436	False	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	115803,248324
chr9:46269096-46269694	chr9	-	47171032	47171108	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-3540302,-483517
chr9:46269096-46269694	chr9	+	44757082	44757206	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	233029,-1126352
chr9:46269096-46269694	chr9	-	45113792	45113916	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-123607,-1483062
chr20:56726627-56727516	chr20	+	56726906	56727478	True	NM_178456,NR_003505	chr20,chr20	+,-	C20orf85,PPP4R1L	-992,157073
chr5:154089128-154090157	chr5	+	154089189	154089825	True	NM_015315,NR_036094	chr5,chr5	+,-	LARP1,MIR3141	2636,-113557
chr1:67395349-67395795	chr1	+	67395364	67395672	True	NM_020948,NM_024763,NM_001146110,NM_001146111,NM_001146112,NM_001146113,NM_001077704,NM_207014,NM_001077702,NM_001077703,NM_001077700,NM_001077701	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,-,+,+,+,+,+,-,+,+,+,+	MIER1,WDR78,MIER1,MIER1,MIER1,MIER1,MIER1,WDR78,MIER1,MIER1,MIER1,MIER1	-4837,-4794,-4837,-4837,-4837,-4837,253,-4794,-4837,-4837,-4837,253
chr14:75343965-75344461	chr14	+	75344283	75344447	True	NR_033814,NM_001080408,NM_001933	chr14,chr14,chr14	+,-,+	DLST,PROX2,DLST	4146,-13746,4146
chr5:1110270-1110676	chr5	+	1110284	1110674	True	NM_001003841,NM_006598	chr5,chr5	+,-	SLC6A19,SLC12A7	91035,1556
chr4:100748612-100750559	chr4	+	100748807	100750232	True	NM_021970,NM_014395	chr4,chr4	-,+	LAMTOR3,DAPP1	65531,-10877
chr12:120805759-120805962	chr12	+	120805802	120805952	True	NM_012240,NM_002442	chr12,chr12	+,-	SIRT4,MSI1	-65729,1056
chr4:144255510-144256489	chr4	+	144255742	144256374	True	NM_001168235,NM_207123,NM_002039	chr4,chr4,chr4	-,+,+	FREM3,GAB1,GAB1	365506,1608,1608
chr12:48168229-48169945	chr12	+	48168366	48169837	True	NM_001098531,NM_017842	chr12,chr12	-,+	RAPGEF3,SLC48A1	-15477,-1450
chr20:62483448-62483891	chr20	+	62483610	62483892	True	NM_080622,NM_025224	chr20,chr20	+,-	ABHD16B,ZBTB46	8673,-46754
chr13:45699731-45700477	chr13	+	45699757	45700385	True	NM_004128,NM_198404	chr13,chr13	+,-	GTF2F2,KCTD4	-5177,74844
chr1:13521980-13522436	chr1	+	13522177	13522403	True	NM_001100114,NM_001099852,NM_001099850	chr1,chr1,chr1	+,+,-	PRAMEF21,PRAMEF20,PRAMEF18	-265,-6162,-44608
chr1:13521980-13522436	chr1	+	13742597	13743242	False	NM_001100114,NM_001099852,NM_001099850	chr1,chr1,chr1	+,+,-	PRAMEF21,PRAMEF20,PRAMEF18	-301,-6196,-44192
chr12:56658710-56660107	chr12	+	56659251	56660130	True	NM_173595,NM_144576,NM_001099337	chr12,chr12,chr12	-,+,+	ANKRD52,COQ10A,COQ10A	-7108,511,936
chr9:130495652-130496701	chr9	+	130495670	130496594	True	NM_130459,NM_144965,NM_001085347,NM_001134430,NM_001134431	chr9,chr9,chr9,chr9,chr9	-,+,-,-,-	TOR2A,TTC16,TOR2A,TOR2A,TOR2A	1060,-17363,1060,1060,1060
chr11:72464114-72464553	chr11	+	72464146	72464546	True	NM_001040118,NM_033388	chr11,chr11	-,+	ARAP1,ATG16L2	-712,60904
chr21:33954400-33954641	chr21	+	33954402	33954668	True	NM_058187,NM_144659	chr21,chr21	+,-	C21orf63,TCP10L	-169701,3227
chr15:69222672-69222958	chr15	+	69222696	69223006	True	NR_033672,NM_145658,NM_001184780,NR_033671,NM_006305	chr15,chr15,chr15,chr15,chr15	+,+,+,+,-	NOX5,SPESP1,NOX5,NOX5,ANP32A	92,92,92,-71,-109435
chr12:50016508-50017030	chr12	+	50016655	50017016	True	NM_012272,NM_001031698,NM_032130	chr12,chr12,chr12	+,+,-	PRPF40B,PRPF40B,FAM186B	386,7310,-17222
chr3:45018493-45018712	chr3	+	45018568	45018722	True	NM_015004,NR_023353,NM_016598,NM_001135179	chr3,chr3,chr3,chr3	+,+,-,-	EXOSC7,EXOSC7,ZDHHC3,ZDHHC3	-881,-881,-894,-894
chr15:89920119-89920705	chr15	+	89920177	89920670	True	NR_029692,NR_015411,NM_002693	chr15,chr15,chr15	+,+,-	MIR9-3,LOC254559,POLG	-8980,602,-42151
chr16:30089018-30090177	chr16	+	30089086	30090139	True	NM_002720,NM_004608	chr16,chr16	+,-	PPP4C,TBX6	-1755,13117
chr1:151321418-151322214	chr1	+	151321573	151321809	True	NM_000449,NM_002796,NM_001025603	chr1,chr1,chr1	-,+,-	RFX5,PSMB4,RFX5	-1804,50231,-1804
chr17:57973287-57973645	chr17	+	57973310	57973541	True	NM_001193611,NM_001193610,NM_001193613,NM_001193612,NM_001193609,NM_016261,NM_003161	chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,-,+	TUBD1,TUBD1,TUBD1,TUBD1,TUBD1,TUBD1,RPS6KB1	-3004,-3004,-3004,-3004,-3004,-3004,-2930
chr1:44399532-44399744	chr1	+	44399559	44399791	True	NM_057090,NM_001136215,NM_006934,NM_057091	chr1,chr1,chr1,chr1	+,+,-,+	ARTN,ARTN,SLC6A9,ARTN	-618,-618,83256,-618
chr9:39463436-39464220	chr9	+	39463631	39464195	True	NM_001040065,NR_003528	chr9,chr9	+,-	FAM75A2,LOC653501	-107983,381
chr9:39463436-39464220	chr9	+	41608649	41609213	False	NM_001113541,NR_003528	chr9,chr9	+,-	FAM75A5,LOC653501	-108021,381
chr9:39463436-39464220	chr9	+	40791233	40791640	False	NR_026801,NM_033160	chr9,chr9	+,-	FAM74A3,ZNF658	-75760,528
chr19:35595497-35597346	chr19	+	35595585	35597107	True	NM_001136012,NM_001136010,NM_001136011,NM_021910,NR_024562,NR_024561,NM_001136009,NM_001136008,NM_001136007,NM_005971	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,-,-,+,+,+,+	FXYD3,FXYD3,FXYD3,FXYD3,LOC100128675,LOC100128675,FXYD3,FXYD3,FXYD3,FXYD3	9624,9624,9624,9624,151,118,9624,9624,9624,9624
chr9:136223480-136223831	chr9	+	136223487	136223879	True	NM_133640,NM_000972,NM_181491,NR_000017,NR_002447,NM_003172,NM_017503,NR_002448,NR_000016	chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,+,-,+,+,-,+,+,+	MED22,RPL7A,MED22,SNORD36B,SNORD24,SURF1,SURF2,SNORD36A,SNORD36C	-8515,-8469,-8515,-6589,-7287,-126,-117,-6227,-5837
chr17:19034510-19035174	chr17	+	19034519	19035114	True	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	-3788,-84183
chr17:19034510-19035174	chr17	-	18946057	18946652	False	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	84129,3734
chr19:54849435-54850146	chr19	+	54849471	54850005	True	NM_012276,NM_001005367	chr19,chr19	-,+	LILRA4,TTYH1	466,76599
chr20:62373638-62374258	chr20	+	62373702	62374300	True	NM_020062,NM_003224,NM_017806	chr20,chr20,chr20	+,-,+	SLC2A4RG,ARFRP1,LIME1	-2542,-34347,-5775
chr7:48010291-48011018	chr7	+	48010391	48010973	True	NM_001100159,NM_004507,NR_037917	chr7,chr7,chr7	+,-,-	C7orf57,HUS1,HUS1	64143,8299,8299
chrX:49028248-49028513	chrX	+	49028265	49028457	True	NM_002668,NM_006150,NM_001099682,NM_001099681,NM_001099680,NM_024859	chrX,chrX,chrX,chrX,chrX,chrX	+,-,+,+,+,+	PLP2,PRICKLE3,MAGIX,MAGIX,MAGIX,MAGIX	-132,14369,-9135,-9135,-8046,-9135
chr5:68788178-68788467	chr5	+	68788241	68788493	True	NM_002538,NM_001205254,NM_001015892	chr5,chr5,chr5	+,+,-	OCLN,OCLN,TAF9	-173,96,-122401
chr15:22554959-22555871	chr16	-	87516283	87516333	True	NM_022818,NM_015144	chr16,chr16	+,-	MAP1LC3B,ZCCHC14	-90533,9177
chr22:47132373-47133044	chr22	+	47132420	47132816	True	NM_022766,NM_014346	chr22,chr22	-,+	CERK,TBC1D22A	1386,25701
chr5:127420362-127420614	chr5	+	127420469	127420629	True	NR_015360,NM_001046	chr5,chr5	-,+	FLJ33630,SLC12A2	-1703,-1037
chr1:155891242-155892558	chr1	+	155891329	155892600	True	NR_002974,NM_181885,NR_003005	chr1,chr1,chr1	-,+,-	SNORA42,RXFP4,SCARNA4	-1496,18879,3332
chr10:11202569-11204142	chr10	+	11202921	11203860	True	NM_001083591,NR_024411,NM_001025076	chr10,chr10,chr10	+,-,+	CELF2,LOC254312,CELF2	3132,-208795,3132
chr11:89306629-89307117	chr11	+	89306693	89307085	True	NM_153696,NM_001143837	chr11,chr11	+,-	FOLH1B,NOX4	85379,15744
chr3:13978091-13979731	chr3	+	13978112	13979637	True	NR_036481,NM_004625,NR_002223	chr3,chr3,chr3	+,-,+	LOC100132526,WNT7A,TPRXL	-3610,-56494,-1
chr14:105888111-105888431	chr14	+	105888319	105888451	True	NM_004689,NM_001203258,NM_001519	chr14,chr14,chr14	+,+,-	MTA1,MTA1,BRF1	-2184,-2184,-120990
chr17:76183887-76184221	chr17	+	76184093	76184193	True	NM_001010982,NR_027083,NM_001145526,NM_003258	chr17,chr17,chr17,chr17	+,+,+,-	AFMID,AFMID,AFMID,TK1	-746,-746,-746,-808
chr16:29084435-29085778	chr16	+	29084726	29084795	True	NM_024816,NR_003369	chr16,chr16	-,+	RABEP2,RRN3P2	-148194,1367
chr13:46040331-46040660	chr13	+	46040466	46040703	True	NM_001204476,NM_001010875,NM_031431	chr13,chr13,chr13	+,-,+	COG3,SLC25A30,COG3	-1496,-47950,-1496
chr10:15748352-15749789	chr10	+	15748773	15749308	True	NM_183005,NM_003638	chr10,chr10	+,-	RPP38,ITGA8	-609645,12523
chr14:22103687-22104939	chr14	+	22103689	22104662	True	NM_001001912,NM_001005466	chr14,chr14	+,-	OR4E2,OR10G2	28634,-691
chr1:48390098-48390479	chr1	+	48390137	48390410	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	72203,297946
chr1:120146189-120147821	chr1	+	120146354	120147837	True	NR_033781,NR_036540	chr1,chr1	+,-	HSD3BP4,LOC644242	-39902,-4440
chr11:63973610-63973844	chr11	+	63973636	63973836	True	NM_178443,NM_001160393,NM_031471	chr11,chr11,chr11	+,-,+	FERMT3,TRPT1,FERMT3	315,19555,315
chr14:104392891-104393343	chr14	+	104393015	104393179	True	NM_001127393,NM_153046,NM_004894	chr14,chr14,chr14	-,+,-	C14orf2,TDRD9,C14orf2	-5112,1637,-5112
chr19:50315084-50315804	chr19	+	50315485	50315778	True	NM_025129,NR_033269,NM_001171937,NM_030973	chr19,chr19,chr19,chr19	-,-,-,+	FUZ,FUZ,FUZ,MED25	840,840,840,5757
chr19:49313146-49313853	chr19	+	49313161	49313719	True	NM_019113,NR_028451,NM_001164773,NR_028450,NM_001190	chr19,chr19,chr19,chr19,chr19	+,-,-,-,-	FGF21,BCAT2,BCAT2,BCAT2,BCAT2	-53870,509,651,651,651
chr22:37977770-37979156	chr22	+	37977802	37979091	True	NM_152243,NM_006498	chr22,chr22	+,-	CDC42EP1,LGALS2	-21382,-1778
chr11:58384255-58385168	chr11	+	58384255	58385165	True	NM_000614,NM_001143995	chr11,chr11	+,-	CNTF,LPXN	4980,-38616
chr16:82088237-82089377	chr16	+	82088247	82089413	True	NM_145168,NM_002153	chr16,chr16	-,+	SDR42E1,HSD17B2	-43154,-19441
chrM:7206-8113	chr1	+	567876	568562	False	NM_001005221,NR_015368	chr1,chr1	-,+	OR4F29,LOC643837	53522,194501
chr1:201476842-201477258	chr1	+	201476899	201477307	True	NM_001193570,NM_001193571,NR_026667,NM_004078	chr1,chr1,chr1,chr1	-,-,+,-	CSRP1,CSRP1,RPS10P7,CSRP1	-512,-932,11724,-512
chr11:65231678-65233024	chr11	+	65232461	65232918	True	NR_030343,NM_182556	chr11,chr11	+,-	MIR612,SLC25A45	-20592,-82319
chr10:32897599-32899191	chr10	+	32897971	32898883	True	NM_024688,NM_025209	chr10,chr10	+,-	C10orf68,EPC1	-41371,-261858
chr9:78514465-78515485	chr9	+	78514623	78515151	True	NM_006200,NR_031679,NM_001190482	chr9,chr9,chr9	+,-,+	PCSK5,MIR548H3,PCSK5	-9122,-175879,-9122
chr11:2952437-2954097	chr11	+	2952750	2954084	True	NM_002555,NM_003311	chr11,chr11	+,-	SLC22A18,PHLDA2	-29289,-2100
chr8:99441641-99442505	chr8	+	99441790	99442550	True	NM_024759,NM_020697	chr8,chr8	-,+	NIPAL2,KCNS2	-135169,-2593
chr1:36690454-36690656	chr1	+	36690492	36690700	True	NM_014408,NM_005119	chr1,chr1	-,+	TRAPPC3,THRAP3	-75425,-526
chr18:61777651-61779111	chr18	+	61777667	61779159	True	NR_027245,NR_033881	chr18,chr18	-,+	C18orf20,LOC284294	37158,-6402
chr1:151965453-151965777	chr1	+	151965452	151965801	True	NR_024237,NM_002966	chr1,chr1	+,-	LOC100132111,S100A10	-154559,963
chr3:180326910-180327775	chr3	+	180326947	180327817	True	NM_001042601,NM_133462,NM_181426	chr3,chr3,chr3	+,+,-	TTC14,TTC14,CCDC39	-7080,-7080,69522
chr10:90711464-90711761	chr10	+	90711474	90711762	True	NM_001613,NM_000043	chr10,chr10	-,+	ACTA2,FAS	868,38525
chr3:52726009-52726490	chr3	+	52726025	52726223	True	NR_003047,NM_018313,NR_003687,NM_014366,NR_003057,NM_206825,NM_206826	chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,-,+,+,+,+,+	SNORD19,PBRM1,SNORD19B,GNL3,SNORD69,GNL3,GNL3	-2828,-6159,-1330,-6148,528,-6148,-6148
chr16:65234929-65235597	chr16	+	65234931	65235633	True	NM_001795,NM_001797	chr16,chr16	+,-	CDH5,CDH11	1164891,-79012
chr7:131376142-131377018	chr7	+	131376155	131376977	True	NM_005397,NM_013255	chr7,chr7	-,+	PODXL,MKLN1	-134779,-363611
chr5:61602915-61603124	chr5	+	61602952	61603172	True	NM_004520,NM_014473,NM_001098511	chr5,chr5,chr5	+,-,+	KIF2A,DIMT1L,KIF2A	-1014,96606,-1014
chr3:11763318-11764365	chr3	+	11763326	11763808	True	NM_014667,NM_003178	chr3,chr3	-,+	VGLL4,SYN2	-1106,282053
chr13:36923322-36924419	chr13	+	36923471	36924453	True	NM_015087,NM_001111046,NM_001142296,NM_001142295	chr13,chr13,chr13,chr13	-,+,-,-	SPG20,CCNA1,SPG20,SPG20	-2825,81513,-2825,-2537
chr22:18507665-18507903	chr22	+	18507675	18507844	True	NM_001136004,NM_015241,NR_024417,NM_001122731	chr22,chr22,chr22,chr22	-,-,+,-	MICAL3,MICAL3,FLJ41941,MICAL3	-350,-350,4306,-350
chr2:114648516-114648739	chr2	+	114648515	114648769	True	NM_005721,NR_034130	chr2,chr2	+,-	ACTR3,LOC100499194	-1035,88848
chr4:113711802-113712735	chr4	+	113712040	113712603	True	NR_029857,NM_001127493	chr4,chr4	-,+	MIR302B,ANK2	-142327,26635
chr5:95185867-95186837	chr5	+	95186110	95186692	True	NR_026936,NM_002064	chr5,chr5	+,-	C5orf27,GLRX	1243,-27533
chr11:108095809-108096502	chr11	+	108095838	108096555	True	NM_000051,NM_002519	chr11,chr11	+,-	ATM,NPAT	-2334,-2473
chr1:145434328-145435948	chr1	+	145435066	145435658	True	NM_006472,NM_032305	chr1,chr1	+,-	TXNIP,POLR3GL	2803,34779
chr2:113033954-113034226	chr2	+	113033986	113034268	True	NM_198581,NM_032494	chr2,chr2	+,-	ZC3H6,ZC3H8	-864,-21322
chr8:145729322-145729707	chr8	+	145729508	145729746	True	NM_032902,NM_005309,NM_004260,NM_138431	chr8,chr8,chr8,chr8	+,+,-,+	PPP1R16A,GPT,RECQL4,MFSD3	-7450,-94,13514,4805
chr6:112064031-112064260	chr6	+	112064048	112064134	True	NR_034109,NM_153048	chr6,chr6	+,-	LOC643749,FYN	-259427,16207
chr8:22025243-22025904	chr8	+	22025264	22025838	True	NM_139278,NM_001199,NM_001172357,NR_033403,NR_033404,NM_001172410,NM_006129,NM_003018	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,+,+,+,+,+,+,+	LGI3,BMP1,SFTPC,BMP1,BMP1,SFTPC,BMP1,SFTPC	-10920,-2662,-6131,-2662,-2662,-6131,-2662,-6131
chr21:34189800-34191053	chr21	+	34189822	34190840	True	NM_001162496,NM_001162495,NM_019596,NR_024623	chr21,chr21,chr21,chr21	-,-,-,+	C21orf62,C21orf62,C21orf62,C21orf49	-3769,-3769,-3769,-45469
chr22:32649625-32650127	chr22	+	32649625	32650165	True	NM_014227,NM_006604	chr22,chr22	-,+	SLC5A4,RFPL3	1203,100706
chr17:30732072-30733221	chr17	+	30732330	30733226	True	NM_002815,NM_022344	chr17,chr17	+,-	PSMD11,C17orf75	38275,-63141
chr11:66047849-66048070	chr11	+	66047854	66048052	True	NM_020470,NM_182553	chr11,chr11	-,+	YIF1A,CNIH2	8636,-2209
chr20:23433884-23434358	chr20	+	23434021	23434357	True	NM_130794,NM_138283,NM_080830	chr20,chr20,chr20	-,+,-	CST11,CSTL1,CST11	-539,-13750,-539
chr4:71001772-71003099	chr4	+	71002047	71003005	True	NR_033311,NM_001891	chr4,chr4	+,-	CSN1S2BP,CSN2	-2784,-175321
chr5:691548-692653	chr5	+	691600	692699	True	NM_018140,NM_007030	chr5,chr5	+,-	CEP72,TPPP	-79246,861
chr5:691548-692653	chr5	+	783665	784080	False	NM_001166260,NM_024786	chr5,chr5	+,-	TRIP13,ZDHHC11	108888,67071
chr20:33870951-33871903	chr20	+	33871112	33871896	True	NM_006690,NM_002212,NM_181466,NM_181468,NM_178468	chr20,chr20,chr20,chr20,chr20	+,-,-,-,-	MMP24,EIF6,EIF6,EIF6,FAM83C	-56624,748,748,660,8379
chrX:77168897-77170821	chrX	+	77168923	77170535	True	NM_000052,NM_032121	chrX,chrX	+,-	ATP7A,MAGT1	-2783,-17858
chr6:10729490-10730185	chr6	+	10729640	10729702	True	NM_001165258,NR_026736,NM_016462	chr6,chr6,chr6	+,-,+	TMEM14C,C6orf52,TMEM14C	-6543,-34610,-6543
chr17:33451836-33452189	chr17	+	33452123	33452199	True	NM_002878,NR_037711,NR_037712,NR_037714,NM_133629,NM_017559,NM_001142571	chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,+,-	RAD51L3,RAD51L3,RAD51L3,RAD51L3-RFFL,RAD51L3,FNDC8,RAD51L3	-5235,-5235,-5235,-3582,-5235,-3553,-5235
chr5:94982124-94982373	chr5	+	94982127	94982389	True	NM_031952,NM_001131066,NM_173362,NM_001131065	chr5,chr5,chr5,chr5	-,+,+,+	SPATA9,RFESD,RFESD,RFESD	36375,91,193,193
chr11:5529347-5530071	chr11	+	5529449	5530097	True	NM_001005163,NM_145053,NM_017481	chr11,chr11,chr11	+,-,-	OR52D1,UBQLNL,UBQLN3	-19585,7909,1106
chr1:157043740-157043976	chr1	+	157043809	157044003	True	NM_001004341,NR_001560	chr1,chr1	-,+	ETV3L,CYCSP52	25647,54150
chr9:46114523-46115010	chr9	+	46114525	46114999	True	NM_001145196,NR_024060	chr9,chr9	-,+	FAM75A6,FAM27A	-2483795,-387547
chr9:46114523-46115010	chr9	-	67788807	67788857	False	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	5382,137903
chr9:46114523-46115010	chr9	+	44995543	44995593	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-5358,-1364813
chr9:46114523-46115010	chr9	-	46389316	46389790	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2758586,297775
chr9:46114523-46115010	chr9	+	45730969	45731250	False	NM_001145196,NR_024060	chr9,chr9	-,+	FAM75A6,FAM27A	-2100239,-3991
chr2:191045332-191045549	chr2	+	191045364	191045466	True	NM_001042519,NM_005259,NM_032321	chr2,chr2,chr2	+,-,+	C2orf88,MSTN,C2orf88	122,-117909,214
chr19:54961591-54963339	chr19	+	54961749	54963190	True	NM_198988,NM_052925	chr19,chr19	-,+	LENG9,LENG8	11758,-1737
chr19:7739362-7739836	chr19	+	7739421	7739622	True	NM_001193374,NM_001042461,NM_174894,NM_174918,NM_002002,NM_020415,NM_001042462	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,-,+,+	RETN,TRAPPC5,TRAPPC5,C19orf59,FCER2,RETN,TRAPPC5	-5500,6141,6138,2320,27467,-5500,6084
chr19:18796321-18796625	chr19	+	18796474	18796636	True	NM_004750,NM_001098482,NM_015321	chr19,chr19,chr19	-,+,+	CRLF1,CRTC1,CRTC1	-78814,-2100,-2100
chr17:80607521-80608021	chr17	+	80607530	80608018	True	NM_019613,NM_024619	chr17,chr17	-,+	WDR45L,FN3KRP	-1119,66563
chr2:44065197-44065625	chr2	+	44065196	44065602	True	NM_022436,NM_022437	chr2,chr2	-,+	ABCG5,ABCG8	406,500
chr10:17224025-17225575	chr10	+	17224114	17224978	True	NM_003380,NM_004412	chr10,chr10	+,-	VIM,TRDMT1	45279,19150
chr2:34093176-34095070	chr2	+	34093489	34095014	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-354604,-140205
chr2:234193785-234194979	chr2	+	234193785	234194850	True	NR_003008,NR_003006,NM_018218	chr2,chr2,chr2	+,+,-	SCARNA5,SCARNA6,USP40	-9465,2471,279443
chr12:109217168-109217945	chr12	+	109217209	109217897	True	NM_001917,NM_001161331	chr12,chr12	+,-	DAO,SSH1	55959,3488
chr6:88867996-88869901	chr6	+	88867995	88869494	True	NM_001160259,NM_001160258,NM_001160226,NM_030960,NM_001160260,NM_016083	chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,+,-,-	CNR1,CNR1,CNR1,SPACA1,CNR1,CNR1	6334,6334,6334,-110546,-7113,6334
chr1:16539040-16539242	chr1	+	16539161	16539223	True	NM_153213,NM_001114600	chr1,chr1	-,+	ARHGEF19,C1orf144	-57,154359
chr16:69601320-69601935	chr16	+	69601497	69601940	True	NM_173214,NR_031719,NM_001113178,NM_006599,NM_138714,NM_138713	chr16,chr16,chr16,chr16,chr16,chr16	+,-,+,+,+,+	NFAT5,MIR1538,NFAT5,NFAT5,NFAT5,NFAT5	-2551,-1726,-2551,-2551,-2551,-2551
chr11:6239949-6240729	chr11	+	6239953	6240745	True	NM_173525,NM_001098794	chr11,chr11	+,-	C11orf42,FAM160A2	-13206,15246
chr7:6677633-6677845	chr7	+	6677713	6677773	True	NM_017560,NM_006956	chr7,chr7	+,-	ZNF853,ZNF12	-22237,68843
chr17:74463719-74464091	chr17	+	74463762	74463988	True	NM_022066,NM_001088	chr17,chr17	-,+	UBE2O,AANAT	-14474,-183
chr10:70982458-70983886	chr10	+	70982480	70983191	True	NM_001057,NM_025130	chr10,chr10	-,+	TACR2,HKDC1	193540,-2472
chr2:130901564-130901803	chr2	+	130901616	130901706	True	NM_207310,NR_033903	chr2,chr2	-,+	CCDC74B,LOC285103	975,-14471
chr15:48514267-48515255	chr15	+	48514294	48515271	True	NM_016132,NM_001184832	chr15,chr15	-,+	MYEF2,SLC12A1	-43736,-15847
chr1:67390954-67391183	chr1	+	67390988	67391182	True	NM_020948,NM_024763,NM_001146110,NM_001146111,NM_001146112,NM_001146113,NM_001077704,NM_207014,NM_001077702,NM_001077703,NM_001077700,NM_001077701	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,-,+,+,+,+,+,-,+,+,+,+	MIER1,WDR78,MIER1,MIER1,MIER1,MIER1,MIER1,WDR78,MIER1,MIER1,MIER1,MIER1	-461,-418,-461,-461,-461,-461,4743,-418,-461,-461,-461,4743
chr16:57663594-57664108	chr16	+	57663613	57664081	True	NM_001145771,NM_001145770,NM_001145773,NM_001145772,NM_001145774,NM_033212,NM_201525,NM_201524,NM_005682	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,-,+,+,+	GPR56,GPR56,GPR56,GPR56,GPR56,CCDC102A,GPR56,GPR56,GPR56	-1245,-9754,-1245,-1245,9125,-93136,-1245,-1245,-9754
chr1:178691158-178692296	chr1	+	178691189	178691752	True	NM_152663,NM_004673	chr1,chr1	+,-	RALGPS2,ANGPTL1	2547,148520
chr7:69064228-69064623	chr7	+	69064227	69064349	True	NM_001127231,NM_001127232,NM_015570,NR_037477	chr7,chr7,chr7,chr7	+,+,+,-	AUTS2,AUTS2,AUTS2,MIR3914-1	-373,-372,-372,1708457
chr8:145670218-145670610	chr8	+	145670340	145670586	True	NM_145754,NM_013432	chr8,chr8	+,-	KIFC2,TONSL	21151,-528
chr17:5026880-5028678	chr17	+	5026927	5028533	True	NM_014519,NM_004505	chr17,chr17	-,+	ZNF232,USP6	-530,3153
chr16:31177310-31177878	chr16	+	31177608	31177680	True	NM_173502,NM_001170634	chr16,chr16	-,+	PRSS36,FUS	-16193,13750
chr19:2248425-2249215	chr19	+	2248576	2249198	True	NR_036207,NM_144616,NM_000479	chr19,chr19,chr19	+,-,+	MIR4321,JSRP1,AMH	1439,7274,34
chr14:52321555-52323309	chr14	+	52321604	52323045	True	NR_037676,NM_053064	chr14,chr14	-,+	C14orf82,GNG2	-203142,4004
chr8:37708589-37709416	chr8	+	37708627	37709254	True	NM_018310,NM_032777	chr8,chr8	-,+	BRF2,GPR124	-1196,-54290
chr20:3389420-3389720	chr20	+	3389467	3389627	True	NM_001009984,NM_139322	chr20,chr20	-,+	C20orf194,ATRN	-1212,62037
chr16:57405794-57406042	chr16	+	57405810	57406022	True	NM_020313,NM_002996	chr16,chr16	-,+	CIAPIN1,CX3CL1	75397,391
chr9:89647216-89647818	chr9	+	89647238	89647858	True	NR_027471,NM_001001709	chr9,chr9	-,+	LOC440173,C9orf170	9233,115700
chr1:26703638-26704634	chr1	+	26704155	26704664	True	NM_001114759,NM_024674,NM_173574	chr1,chr1,chr1	-,+,-	ZNF683,LIN28A,ZNF683	-4889,32604,-4889
chr9:33818278-33819848	chr9	+	33818438	33819477	True	NR_003685,NM_017811	chr9,chr9	-,+	SNORD121A,UBE2R2	133427,-1307
chr17:33519963-33520289	chr17	+	33520081	33520279	True	NM_173167,NM_152462	chr17,chr17	+,-	UNC45B,AMAC1	-45296,1183
chr17:33519963-33520289	chr17	-	7386370	7386456	False	NM_000937,NM_020899,NM_001128833,NM_001102614	chr17,chr17,chr17,chr17	+,-,-,+	POLR2A,ZBTB4,ZBTB4,AMAC1L3	1241,1162,-3426,-1700
chr5:50678054-50678469	chr5	+	50678143	50678503	True	NM_198449,NM_002202	chr5,chr5	-,+	EMB,ISL1	-940909,454
chr20:54579297-54579928	chr20	+	54579300	54579924	True	NM_080617,NM_019888	chr20,chr20	-,+	CBLN4,MC3R	138,243863
chr18:9115778-9117326	chr18	+	9116121	9117375	True	NM_001042388,NM_021074	chr18,chr18	-,+	PPP4R1,NDUFV2	497277,-13557
chr1:6615536-6616022	chr1	+	6615742	6615902	True	NM_177540,NM_024654,NM_138697	chr1,chr1,chr1	+,-,+	TAS1R1,NOL9,TAS1R1	-455,-1084,-455
chr2:91960645-91961132	chr22	+	25003841	25004148	False	NM_005265,NM_207644,NM_001032365,NM_001032364	chr22,chr22,chr22,chr22	+,-,+,+	GGT1,C22orf36,GGT1,GGT1	-4891,-14806,-445,-4947
chr2:91960645-91961132	chr2	+	91960788	91961100	True	NR_003503,NR_027238	chr2,chr2	+,-	GGT8P,LOC654342	2267,-112813
chr2:88477424-88478407	chr2	+	88477499	88478365	True	NM_018271,NM_001443	chr2,chr2	+,-	THNSL2,FABP1	-7716,-49849
chr6:86352685-86352991	chr6	+	86352814	86352996	True	NM_006372,NM_002526,NM_001159673,NM_001159675,NM_001159674,NM_001159677,NM_001159676	chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,+,-,-,-,-,-	SYNCRIP,NT5E,SYNCRIP,SYNCRIP,SYNCRIP,SYNCRIP,SYNCRIP	97,-193563,-174,-1645,-206,97,-1645
chr11:64017617-64018438	chr11	+	64017645	64018427	True	NM_057092,NM_138689,NM_001184883,NM_004470,NM_000932,NM_001135208	chr11,chr11,chr11,chr11,chr11,chr11	+,-,+,+,+,+	FKBP2,PPP1R14B,PLCB3,FKBP2,PLCB3,FKBP2	-8108,-3232,567,-9283,567,-9092
chr19:17444727-17445122	chr19	+	17444748	17445098	True	NM_133644,NM_020959,NM_001128855,NM_001195422,NM_032620	chr19,chr19,chr19,chr19,chr19	+,-,+,+,+	GTPBP3,ANO8,GTPBP3,GTPBP3,GTPBP3	3227,590,3227,692,3227
chr15:64646825-64647463	chr15	+	64646838	64647517	True	NM_022048,NM_016213	chr15,chr15	-,+	CSNK1G1,TRIP4	982,32485
chrX:57935517-57936136	chrX	+	57935521	57936037	True	NM_007156,NM_007157	chrX,chrX	-,+	ZXDA,ZXDB	1080,-317303
chr19:52032157-52032726	chr19	+	52032312	52032698	True	NM_001177547,NM_198845,NM_198846,NM_001177549,NM_001177548,NM_007147,NM_001245	chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,+,-	SIGLEC6,SIGLEC6,SIGLEC6,SIGLEC6,SIGLEC6,ZNF175,SIGLEC6	2462,2462,2462,2462,2462,41832,2462
chr15:55556492-55557161	chr15	+	55556711	55557124	True	NM_004855,NM_004580,NM_183236,NM_183234	chr15,chr15,chr15,chr15	+,-,-,-	PIGB,RAB27A,RAB27A,RAB27A	54008,5518,6040,5417
chr19:35453220-35453945	chr19	+	35453276	35453909	True	NR_024018,NM_175872	chr19,chr19	+,-	ZNF30,ZNF792	-35520,1097
chr12:6047913-6048305	chr12	+	6048000	6048085	True	NM_020373,NM_001769	chr12,chr12	-,+	ANO2,CD9	7366,261396
chr3:93781996-93782251	chr3	+	93782005	93782201	True	NM_001195643,NM_022072,NM_176815	chr3,chr3,chr3	-,+,-	DHFRL1,NSUN3,DHFRL1	-26,-201,-174
chr10:8098266-8098557	chr10	+	8098278	8098594	True	NR_024255,NM_002051,NR_024256,NM_001002295	chr10,chr10,chr10,chr10	-,+,-,+	FLJ45983,GATA3,FLJ45983,GATA3	-2831,-1662,-2831,-1662
chr2:149404601-149405292	chr2	+	149404695	149404798	True	NM_181742,NM_015630	chr2,chr2	-,+	ORC4,EPC2	-625522,-2192
chr4:39100830-39101242	chr4	+	39100932	39101238	True	NM_199039,NM_024943	chr4,chr4	+,-	KLHL5,TMEM156	-37139,-66891
chr22:35478856-35479896	chr22	+	35478926	35479849	True	NM_001008494,NM_005368	chr22,chr22	+,-	ISX,MB	-16847,533585
chr3:196013639-196014153	chr3	+	196013804	196014080	True	NM_005017,NM_152672	chr3,chr3	-,+	PCYT1A,OSTalpha	554,-70479
chr15:82824019-82824265	chr15	+	82824122	82824304	True	NM_001199057,NR_033579,NM_001021	chr15,chr15,chr15	-,+,-	LOC100505503,LOC440297,RPS17	611,-70728,611
chr15:82824019-82824265	chr15	+	83208465	83208647	False	NM_001199057,NR_033579,NM_001021	chr15,chr15,chr15	-,+,-	LOC100505503,LOC440297,RPS17	611,-78485,611
chr16:1825520-1825741	chr16	+	1825573	1825679	True	NM_080861,NM_002513,NM_001010865,NM_023936,NM_012225	chr16,chr16,chr16,chr16,chr16	-,-,+,-,+	SPSB3,NME3,EME2,MRPS34,NUBP2	6952,-3863,-2395,-2433,7253
chr3:126430748-126431793	chr3	+	126430785	126431829	True	NM_032343,NM_052883	chr3,chr3	+,-	CHCHD6,TXNRD3	-7719,-56818
chr12:131676539-131677339	chr12	+	131676539	131677380	True	NR_026670,NM_194356	chr12,chr12	+,-	LOC116437,STX2	-27036,-352728
chr20:35918364-35918699	chr20	+	35918416	35918706	True	NM_022077,NM_021081,NM_001003897	chr20,chr20,chr20	+,-,+	MANBAL,GHRH,MANBAL	-416,-33117,-416
chrX:8700363-8700768	chrX	+	8700639	8700791	True	NM_001001888,NM_000216	chrX,chrX	+,-	VCX3B,KAL1	-267819,-412
chr2:20422618-20422935	chr2	+	20422733	20422973	True	NM_004040,NM_002997,NM_001006946	chr2,chr2,chr2	+,-,-	RHOB,SDC1,SDC1	223861,2004,2271
chr19:8213087-8213340	chr19	+	8213091	8213329	True	NM_024552,NM_032447	chr19,chr19	+,-	LASS4,FBN3	60887,-706
chr9:35791980-35792249	chr9	+	35792064	35792216	True	NM_003995,NM_172312	chr9,chr9	+,-	NPR2,SPAG8	189,20093
chr2:190048573-190049840	chr2	+	190048704	190049654	True	NM_000393,NR_037401	chr2,chr2	-,+	COL5A2,MIR3606	-4099,-188409
chr19:11548331-11548769	chr19	+	11548523	11548817	True	NM_001001329,NM_145045,NM_002743	chr19,chr19,chr19	+,-,+	PRKCSH,CCDC151,PRKCSH	-2305,-2543,-2305
chr5:180421944-180423357	chr5	+	180422411	180423373	True	NM_197975,NM_152283	chr5,chr5	+,-	BTNL3,ZFP62	-6624,-134125
chr3:48663842-48664100	chr3	+	48663890	48664131	True	NM_134263,NM_022911,NM_134426,NM_033629,NM_001040454,NM_001008269	chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,+,-,-	SLC26A6,SLC26A6,SLC26A6,TREX1,SLC26A6,TMEM89	8845,8845,8845,-156712,7198,-4701
chr1:20249232-20249668	chr1	+	20249318	20249708	True	NM_015207,NM_014589	chr1,chr1	+,-	OTUD3,PLA2G2E	-40481,452
chr2:74430628-74432243	chr2	+	74430854	74431789	True	NR_027405,NM_018221,NM_006636	chr2,chr2,chr2	+,-,+	MTHFD2,MOBKL1B,MTHFD2	-5215,-24859,-5215
chr1:161382468-161384226	chr1	+	161383616	161384231	True	NM_001136219,NM_001013625	chr1,chr1	+,-	FCGR2A,C1orf192	90973,-45952
chr1:213225344-213227336	chr1	+	213225447	213226946	True	NM_012424,NM_144567,NM_001136138	chr1,chr1,chr1	+,-,+	RPS6KC1,ANGEL2,RPS6KC1	-912,-36279,-912
chr1:177941809-177942295	chr1	+	177941819	177942333	True	NM_170692,NM_033127	chr1,chr1	+,-	RASAL2,SEC16B	120530,-2769
chr16:2021049-2021321	chr16	+	2021107	2021193	True	NR_003142,NM_174903,NM_002952,NR_002327,NR_002326,NM_006453,NR_003020	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,-,-,-,+,+	SNHG9,RNF151,RPS2,SNORA10,SNORA64,TBL3,SNORA78	-6161,-4283,-6280,-8640,-8000,870,-5973
chr3:25705410-25705677	chr3	+	25705482	25705544	True	NM_001068,NM_001145391	chr3,chr3	-,+	TOP2B,OXSM	294,126018
chrX:38662189-38662795	chrX	+	38662334	38662646	True	NM_001034853,NM_001098790,NM_001098791,NM_021242	chrX,chrX,chrX,chrX	-,+,+,+	RPGR,MID1IP1,MID1IP1,MID1IP1	-475546,-1701,-1701,426
chr12:118571865-118572479	chr12	+	118571947	118572285	True	NM_002567,NM_019086	chr12,chr12	+,-	PEBP1,VSIG10	1584,-30137
chr11:27739917-27740506	chr11	+	27739930	27740414	True	NM_170731,NR_033315,NM_170732,NM_001143805,NM_001143807,NM_001143806	chr11,chr11,chr11,chr11,chr11,chr11	-,+,-,-,-,-	BDNF,BDNF-AS1,BDNF,BDNF,BDNF,BDNF	3241,-211582,1962,1962,930,1962
chr1:151484098-151484523	chr1	+	151484228	151484560	True	NM_145796,NM_020770	chr1,chr1	-,+	POGZ,CGN	-52287,-417
chr16:31085282-31085523	chr16	+	31085313	31085561	True	NM_001172669,NM_001172670,NM_024706,NM_001172668,NM_014699	chr16,chr16,chr16,chr16,chr16	-,-,-,-,+	ZNF668,ZNF668,ZNF668,ZNF668,ZNF646	-8904,-8904,130,-490,181
chr4:115866001-115866295	chr4	+	115866005	115866087	True	NM_022569,NR_030303	chr4,chr4	-,+	NDST4,MIR577	168995,-288141
chr16:29987599-29987954	chr16	+	29987726	29987994	True	NM_004783,NM_016151,NM_003609	chr16,chr16,chr16	+,+,-	TAOK2,TAOK2,HIRIP3	-2566,-2566,19468
chr8:128805088-128805378	chr8	+	128805212	128805358	True	NR_003367,NR_024393,NR_031609	chr8,chr8,chr8	+,-,+	PVT1,LOC727677,MIR1204	1420,-310828,2849
chr9:99178661-99179600	chr9	+	99178837	99179591	True	NM_153695,NM_014282	chr9,chr9	-,+	ZNF367,HABP4	1128,32822
chr11:124765730-124766106	chr11	+	124765729	124766145	True	NM_019055,NM_001037558	chr11,chr11	-,+	ROBO4,HEPN1	1736,23000
chr21:47512663-47513141	chr21	+	47512680	47513109	True	NM_001849,NM_058174,NM_058175,NM_006657	chr21,chr21,chr21,chr21	+,+,+,-	COL6A2,COL6A2,COL6A2,FTCD	4923,4923,4923,62429
chr19:2865679-2866485	chr19	+	2865726	2866276	True	NM_021217,NM_024967	chr19,chr19	-,+	ZNF77,ZNF556	78749,1056
chr22:35697802-35698419	chr22	+	35697859	35698295	True	NM_001135729,NM_005368,NM_001135732,NM_001135730,NM_005488,NR_024194,NR_024195	chr22,chr22,chr22,chr22,chr22,chr22,chr22	+,-,+,+,+,+,+	TOM1,MB,TOM1,TOM1,TOM1,TOM1,TOM1	-2649,315139,-2120,-2120,-2120,-2120,-2120
chr17:42263610-42263817	chr17	+	42263699	42263837	True	NM_178542,NM_001076674,NM_024107,NM_177441	chr17,chr17,chr17,chr17	-,+,+,+	C17orf65,TMUB2,TMUB2,TMUB2	295,516,516,736
chr3:197459275-197459632	chr3	+	197459469	197459633	True	NM_001011537,NM_014687	chr3,chr3	+,-	FYTTD1,KIAA0226	16790,4190
chr14:105560626-105561141	chr14	+	105560646	105561076	True	NM_174891,NM_013345	chr14,chr14	+,-	C14orf79,GPR132	-108081,-28892
chr8:7346541-7347333	chr8	+	7346689	7347133	True	NM_001040703,NM_001040704,NM_001040705,NM_001037668,NM_152250,NM_152251	chr8,chr8,chr8,chr8,chr8,chr8	+,-,+,+,+,-	DEFB105B,DEFB106B,DEFB107B,DEFB107A,DEFB105A,DEFB106A	-1504,-2780,6234,6234,-1504,-2780
chr8:7346541-7347333	chr8	-	7679469	7679913	False	NM_001040703,NM_001040704,NM_001040705,NM_001037668,NM_152250,NM_152251	chr8,chr8,chr8,chr8,chr8,chr8	-,+,-,-,-,+	DEFB105B,DEFB106B,DEFB107B,DEFB107A,DEFB105A,DEFB106A	1504,2780,-6231,-6231,1504,2780
chr11:3877428-3878604	chr11	+	3877462	3878439	True	NM_001665,NM_003156	chr11,chr11	-,+	RHOG,STIM1	-15249,-580
chr12:48098310-48098532	chr12	+	48098448	48098524	True	NM_001146076,NM_001146075,NM_017842,NM_024604	chr12,chr12,chr12,chr12	-,-,+,-	RPAP3,RPAP3,SLC48A1,RPAP3	1370,1370,68442,1370
chr9:130333052-130333696	chr9	+	130333054	130333683	True	NM_001032221,NM_022833,NM_001035534	chr9,chr9,chr9	+,-,-	STXBP1,FAM129B,FAM129B	40802,-1699,7635
chr1:11994012-11994599	chr1	+	11994359	11994431	True	NM_000302,NM_138346	chr1,chr1	+,-	PLOD1,KIAA2013	292,-7874
chr2:10279157-10280296	chr2	+	10279237	10280053	True	NR_036222,NM_182626	chr2,chr2	-,+	MIR4261,C2orf48	52794,1455
chr8:121478561-121478968	chr8	+	121478562	121478840	True	NM_022045,NM_014078	chr8,chr8	+,-	MTBP,MRPL13	-20947,-20915
chrX:150560539-150560899	chrX	+	150560544	150560928	True	NM_001017980,NM_134446	chrX,chrX	+,-	VMA21,CD99L2	4728,-493255
chr8:65714549-65715752	chr8	+	65714580	65715606	True	NM_152414,NM_004820	chr8,chr8	+,-	BHLHE22,CYP7B1	-221843,-3232
chr17:7237400-7239158	chr17	+	7237899	7239153	True	NM_001005408,NM_032442,NM_014716	chr17,chr17,chr17	-,-,+	NEURL4,NEURL4,ACAP1	-5261,-5261,694
chr8:69402278-69402741	chr8	+	69402332	69402712	True	NM_052958,NM_020361	chr8,chr8	+,-	C8orf34,CPA6	-159426,-743712
chr1:1369255-1369591	chr1	+	1369316	1369600	True	NM_199121,NR_026871,NM_001146685,NM_022834	chr1,chr1,chr1,chr1	+,-,+,+	VWA1,LOC441869,TMEM88B,VWA1	1302,-12666,-7859,1302
chr19:40006459-40006692	chr19	+	40006605	40006689	True	NM_152361,NM_182704	chr19,chr19	-,+	EID2B,SELV	16855,-903
chr13:108518993-108519291	chr13	+	108518992	108519213	True	NM_032859,NM_001080396	chr13,chr13	+,-	ABHD13,FAM155A	351549,297
chr2:201754181-201754800	chr2	+	201754358	201754806	True	NM_001142356,NM_032472,NM_001142355,NM_001136039,NM_130906,NM_021824	chr2,chr2,chr2,chr2,chr2,chr2	+,-,+,+,-,+	NIF3L1,PPIL3,NIF3L1,NIF3L1,PPIL3,NIF3L1	1834,-509,-359,-359,-509,-301
chr3:194121501-194122719	chr3	+	194122064	194122700	True	NR_033929,NM_004488	chr3,chr3	+,-	FLJ34208,GP5	85168,-2069
chr15:97325194-97326891	chr15	+	97325514	97326850	True	NM_173499,NR_024172	chr15,chr15	+,-	SPATA8,LOC91948	-172,1090859
chr3:121312279-121312871	chr3	+	121312284	121312721	True	NM_199420,NM_016298	chr3,chr3	-,+	POLQ,FBXO40	-47431,-165
chr20:46043095-46043484	chr20	+	46043234	46043450	True	NM_183048,NM_001174087	chr20,chr20	-,+	ZMYND8,NCOA3	-57760,87150
chr14:92572431-92572634	chr14	+	92572476	92572598	True	NM_001164776,NM_001164777,NR_028453,NR_028457,NR_028456,NR_028455,NR_028454,NM_001164778,NM_001164779,NR_028459,NR_028458,NR_028470,NM_017437,NR_031765,NM_001164781,NM_001164780,NM_001164782,NM_004993,NR_028468,NR_028469,NR_028466,NR_028467,NR_028464,NR_028465,NR_028462,NR_028463,NR_028460,NR_028461,NM_030660,NM_001127696,NM_001127697,NM_001164774	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	-,-,-,-,-,-,-,-,-,-,-,-,+,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-	ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,CPSF2,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3	417,417,417,417,417,417,417,417,417,417,417,417,15699,417,417,417,417,417,417,417,417,417,417,417,417,417,417,417,417,417,417,417
chr11:120895304-120896451	chr11	+	120895684	120896416	True	NM_001130047,NM_012101,NM_152715	chr11,chr11,chr11	+,-,+	TBCEL,TRIM29,TBCEL	-932,-886821,-922
chr5:132302042-132302554	chr5	+	132302439	132302537	True	NM_014423,NM_002154	chr5,chr5	-,+	AFF4,HSPA4	-3085,85124
chr1:48307275-48307823	chr1	+	48307387	48307871	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	154741,380485
chr11:109293242-109293670	chr11	+	109293328	109293703	True	NM_015065,NM_207645	chr11,chr11	-,+	EXPH5,C11orf87	-828954,-533
chr18:60991460-60992420	chr18	+	60991865	60992443	True	NM_002639,NM_000657,NM_000633	chr18,chr18,chr18	+,-,-	SERPINB5,BCL2,BCL2	151700,-5252,-5252
chr1:110454868-110456453	chr1	+	110455384	110456492	True	NM_172210,NM_000757,NM_172212,NM_139053,NM_172211	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	CSF1,CSF1,CSF1,EPS8L3,CSF1	-2203,-2203,-2203,-148740,-2203
chr22:30683047-30684864	chr22	+	30683352	30684636	True	NM_001037666,NM_001017437	chr22,chr22	-,+	GATSL3,CCDC157	1030,67990
chr5:142078764-142080523	chr5	+	142078971	142080336	True	NM_001135608,NM_001144934,NM_001144935,NR_026695,NR_026696	chr5,chr5,chr5,chr5,chr5	+,-,-,-,-	ARHGAP26,FGF1,FGF1,FGF1,FGF1	69955,-1336,-1336,-1336,-1336
chr9:139620718-139622371	chr9	+	139620816	139622345	True	NR_003672,NR_024543,NR_024542,NM_152421,NR_002975,NR_002958	chr9,chr9,chr9,chr9,chr9,chr9	-,-,-,+,-,-	SNHG7,SNHG7,SNHG7,FAM69B,SNORA43,SNORA17	341,341,341,-13843,-127,-93
chr2:122406640-122406865	chr2	+	122406719	122406791	True	NR_037856,NR_037858,NM_001142274,NR_037857,NM_015282,NM_001142273	chr2,chr2,chr2,chr2,chr2,chr2	+,+,-,+,-,-	LOC254128,LOC254128,CLASP1,LOC254128,CLASP1,CLASP1	773,438,311,438,311,311
chr9:19411768-19413667	chr9	+	19411807	19413203	True	NM_001010,NM_001010887	chr9,chr9	-,+	RPS6,ACER2	-31572,-2945
chr2:26539728-26539973	chr2	+	26539759	26539937	True	NM_001145168,NM_001145169,NM_033505	chr2,chr2,chr2	-,-,+	GPR113,GPR113,EPT1	2030,2083,29016
chr4:114900173-114900525	chr4	+	114900177	114900544	True	NM_001128174,NM_024590	chr4,chr4	+,-	UGT8,ARSJ	619066,384
chr17:21157975-21158667	chr17	+	21158103	21158611	True	NM_152914,NM_145109	chr17,chr17	-,+	C17orf103,MAP2K3	-1525,29356
chr17:6917141-6917609	chr17	+	6917233	6917605	True	NR_030178,NM_001142799,NM_001004333,NM_001142798,NM_174893,NR_037715,NR_037716,NR_037717,NR_029712,NM_181844	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,+,+,+,+,+,+,-,+	MIR497,C17orf49,RNASEK,C17orf49,C17orf49,RNASEK,RNASEK,RNASEK-C17ORF49,MIR195,BCL6B	3786,450,-1548,450,450,-1548,-1548,-1548,3465,8763
chrX:15540412-15540761	chrX	+	15540469	15540677	True	NM_003662,NM_001721	chrX,chrX	-,+	PIR,BMX	-28758,-15089
chr1:54409588-54410037	chr1	+	54409611	54409906	True	NM_052940,NM_016126	chr1,chr1	+,-	LRRC42,HSPB11	2130,1432
chr5:174906319-174907218	chr5	+	174906429	174907000	True	NM_000794,NM_022754	chr5,chr5	-,+	DRD1,SFXN1	-35266,-966
chr8:104053618-104055437	chr8	+	104053645	104055462	True	NM_001695,NR_027071	chr8,chr8	+,-	ATP6V1C1,C8orf56	-20455,98158
chr16:3546650-3547995	chr16	+	3546681	3548032	True	NM_015041,NM_001080524	chr16,chr16	+,-	CLUAP1,C16orf90	2930,-1260
chr19:20189120-20189336	chr19	+	20189135	20189239	True	NM_033196,NM_007138	chr19,chr19	-,+	ZNF682,ZNF90	-38858,-383
chr19:20189120-20189336	chr19	+	22817471	22817534	False	NM_020855,NM_001080409	chr19,chr19	+,-	ZNF492,ZNF99	-409,135313
chr5:113720494-113721595	chr5	+	113720726	113721462	True	NM_018700,NM_021614	chr5,chr5	-,+	TRIM36,KCNN2	794837,-22775
chr4:86851220-86852056	chr4	+	86851385	86852101	True	NM_031305,NM_138981	chr4,chr4	+,-	ARHGAP24,MAPK10	-10,176755
chr12:109225995-109226621	chr12	+	109226187	109226641	True	NM_001917,NM_001161331	chr12,chr12	+,-	DAO,SSH1	47215,-4860
chr18:28621081-28621328	chr18	+	28621114	28621366	True	NM_001941,NM_001942,NM_024423	chr18,chr18,chr18	-,+,-	DSC3,DSG1,DSC3	1465,276685,1465
chrX:41785871-41787782	chrX	+	41786047	41787592	True	NM_003688,NM_001126055,NM_001126054,NM_080817	chrX,chrX,chrX,chrX	-,-,-,+	CASK,CASK,CASK,GPR82	-3760,-3760,-3760,-202690
chr10:103813658-103814472	chr10	+	103813757	103814478	True	NM_024747,NM_024541	chr10,chr10	+,-	HPS6,C10orf76	10645,1504
chr19:10628713-10629025	chr19	+	10628719	10629067	True	NM_001166215,NM_030760,NM_032885	chr19,chr19,chr19	-,-,+	S1PR5,S1PR5,ATG4D	-51,-593,25579
chr22:21334395-21336014	chr22	+	21334676	21335926	True	NM_001008695,NM_006767	chr22,chr22	-,+	THAP7,LZTR1	20528,631
chr11:57335762-57336340	chr11	+	57335855	57336309	True	NM_004223,NM_001105565,NM_198183	chr11,chr11,chr11	-,+,-	UBE2L6,SMTNL1,UBE2L6	-675,-25796,-402
chr7:55799331-55799824	chr7	+	55799523	55799871	True	NM_182633,NR_003949	chr7,chr7	+,-	ZNF713,FKBP9L	180459,-27263
chr3:112070045-112070885	chr3	+	112070093	112070848	True	NM_005944,NM_183061	chr3,chr3	+,-	CD200,SLC9A10	-18241,-57019
chr10:75756832-75757568	chr10	+	75756837	75757443	True	NM_003373,NM_001001791,NM_014000	chr10,chr10,chr10	+,-,+	VCL,C10orf55,VCL	428,-74302,428
chr8:126007863-126008524	chr8	+	126008022	126008503	True	NM_003129,NM_014846	chr8,chr8	+,-	SQLE,KIAA0196	2216,95615
chr5:150073771-150074747	chr5	+	150073855	150074613	True	NM_018047,NM_133371	chr5,chr5	-,+	RBM22,MYOZ3	6106,-33502
chr19:4247219-4248159	chr19	+	4247222	4248131	True	NM_001169126,NM_018074	chr19,chr19	-,+	TMIGD2,CCDC94	54347,-162
chr8:109263048-109263604	chr8	+	109263337	109263608	True	NM_001568,NM_014673	chr8,chr8	-,+	EIF3E,TTC35	-2378,192244
chrX:154459056-154460930	chrX	+	154459268	154460969	True	NM_003372,NM_171998	chrX,chrX	+,-	VBP1,RAB39B	-14618,32933
chr8:37413387-37413717	chr8	+	37413397	37413759	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	139541,191855
chr10:49621361-49623313	chr10	+	49621439	49623286	True	NM_001018071,NM_139049	chr10,chr10	-,+	FRMPD2,MAPK8	-138498,-11809
chr17:15588386-15588885	chr17	+	15588620	15588683	True	NM_006470,NM_001130842	chr17,chr17	-,+	TRIM16,ZNF286A	-2427,14207
chr17:15588386-15588885	chr17	-	18600247	18600310	False	NM_001145045,NM_001037330	chr17,chr17	-,+	ZNF286B,TRIM16L	-14675,25091
chr15:59908158-59908420	chr15	+	59908166	59908466	True	NM_004751,NM_004492	chr15,chr15	+,-	GCNT3,GTF2A2	-4242,41321
chr20:36975520-36975869	chr20	+	36975524	36975673	True	NM_004139,NR_002910	chr20,chr20	+,-	LBP,SNORA71B	-702,78361
chr1:19614114-19614427	chr1	+	19614129	19614475	True	NM_012067,NR_037847,NM_001040125	chr1,chr1,chr1	-,-,+	AKR7A3,LOC100506730,PQLC2	855,7805,24264
chr15:75229263-75229668	chr15	+	75229294	75229687	True	NM_002435,NM_004255	chr15,chr15	+,-	MPI,COX5A	-46943,859
chr11:64411354-64412083	chr11	+	64411427	64412115	True	NM_153378,NM_138734	chr11,chr11	+,-	SLC22A12,NRXN2	-53196,-640
chr8:52811891-52812153	chr8	+	52811961	52812125	True	NM_052937,NM_005285	chr8,chr8	-,+	PCMTD1,NPBWR1	-226,1040342
chr7:20899535-20900434	chr7	+	20899635	20900284	True	NM_198956,NR_026673	chr7,chr7	-,+	SP8,RPL23P8	-73127,-32777
chr5:173127883-173128154	chr5	+	173127916	173128172	True	NR_027109,NM_138369	chr5,chr5	+,-	LOC285593,BOD1	-121317,-84250
chr1:113618612-113618931	chr1	+	113618916	113618981	True	NM_003051,NM_014813	chr1,chr1	-,+	SLC16A1,LRIG2	-119941,-3136
chr1:163117482-163117808	chr1	+	163117482	163117696	True	NM_001195303,NM_001113380	chr1,chr1	-,+	RGS5,RGS4	54991,-75838
chr21:42793939-42795127	chr21	+	42794099	42794895	True	NM_002462,NM_001135099,NM_001178046,NM_001144925	chr21,chr21,chr21,chr21	+,-,+,+	MX1,TMPRSS2,MX1,MX1	3082,85147,3207,-1631
chr18:46475472-46475808	chr18	+	46475577	46475748	True	NM_001190823,NM_001190822,NM_001190821,NM_005904,NM_014772	chr18,chr18,chr18,chr18,chr18	-,-,-,-,+	SMAD7,SMAD7,SMAD7,SMAD7,CTIF	-6400,6,1384,1384,-410201
chr22:38796156-38797022	chr22	+	38796402	38797035	True	NM_016657,NR_002821	chr22,chr22	+,-	KDELR3,LOC400927	67047,-1471
chr6:72294776-72295232	chr6	+	72294791	72295205	True	NM_024576,NR_026807	chr6,chr6	+,-	OGFRL1,C6orf155	-296365,-164343
chr14:51560784-51561000	chr14	+	51560796	51560970	True	NM_052978,NM_015163,NM_030755	chr14,chr14,chr14	-,-,+	TRIM9,TRIM9,TMX1	1502,1502,145915
chr1:182357737-182359054	chr1	+	182357944	182358930	True	NR_034131,NM_001033044,NM_002065,NM_001033056	chr1,chr1,chr1,chr1	+,-,-,-	NCRNA00272,GLUL,GLUL,GLUL	17825,2461,2461,1659
chr9:134164648-134164890	chr9	+	134164647	134164885	True	NM_032728,NM_033387	chr9,chr9	+,-	PPAPDC3,FAM78A	195,-12741
chr14:105557744-105557974	chr14	+	105557841	105558023	True	NM_174891,NM_013345	chr14,chr14	+,-	C14orf79,GPR132	-105276,-26087
chr17:7184744-7185087	chr17	+	7184789	7185005	True	NM_001042,NM_015982	chr17,chr17	+,-	SLC2A4,YBX2	48,12921
chr1:102439099-102440269	chr1	+	102439287	102440247	True	NR_033424,NM_058170	chr1,chr1	+,-	DNAJA1P5,OLFM3	-101779,22595
chr20:58297696-58299131	chr20	+	58297938	58298952	True	NM_014258,NM_183246,NM_183244	chr20,chr20,chr20	-,+,+	SYCP2,PHACTR3,PHACTR3	208307,-1724,-1724
chr16:68033611-68035013	chr16	+	68033844	68034703	True	NM_017803,NM_022355	chr16,chr16	+,-	DUS2L,DPEP2	22500,-480
chr16:432585-433007	chr16	+	432587	432889	True	NM_021259,NR_024453	chr16,chr16	-,+	TMEM8A,LOC100134368	-637,-397
chr21:46237802-46238006	chr21	+	46237816	46237902	True	NM_198699,NM_006936	chr21,chr21	+,-	KRTAP10-12,SUMO3	-120780,192
chr17:4462264-4462480	chr17	+	4462284	4462452	True	NM_198501,NM_001105538,NM_014520,NM_153338,NM_001122890	chr17,chr17,chr17,chr17,chr17	+,-,-,-,-	SMTNL2,MYBBP1A,MYBBP1A,GGT6,GGT6	24823,-3603,-3603,1474,1474
chr9:97021949-97022284	chr9	+	97022043	97022161	True	NM_194320,NM_017561	chr9,chr9	+,-	ZNF169,FAM22F	-516,68815
chr5:131346771-131347008	chr5	+	131346811	131347003	True	NM_001205247,NM_001205251,NM_001205250,NM_001205248,NM_000588,NM_015256,NM_001009185	chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,+,-,-	ACSL6,ACSL6,ACSL6,ACSL6,IL3,ACSL6,ACSL6	402,654,808,654,49343,402,402
chrX:72161660-72162570	chrX	+	72161699	72162595	True	NR_034116,NR_026594,NR_026595	chrX,chrX,chrX	+,-,-	LOC100129407,NCRNA00246B,NCRNA00246	-3755,1044,1044
chrX:72161660-72162570	chrX	-	71997890	71998787	False	NR_034116,NM_001080851	chrX,chrX	-,+	LOC100129407,DMRTC1B	3755,66088
chrX:68836854-68837225	chrX	+	68836869	68837247	True	NM_001002254,NM_001399,NM_001005609,NM_001005610,NM_001005613,NM_001005612	chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,+	AWAT2,EDA,EDA,EDA,EDA,EDA	432591,-1009,-1009,-1009,-1009,-1009
chr6:44236246-44237691	chr6	+	44236353	44237498	True	NM_001137560,NM_004556	chr6,chr6	+,-	TMEM151B,NFKBIE	981,-2828
chr2:73430627-73430948	chr2	+	73430706	73430819	True	NM_032319,NM_001134462	chr2,chr2	-,+	C2orf7,NOTO	29588,-1371
chr16:83934179-83935192	chr16	+	83934233	83935210	True	NM_001080442,NM_012213	chr16,chr16	-,+	SLC38A8,MLYCD	140603,-1558
chr11:19215199-19215688	chr11	+	19215520	19215726	True	NM_001127656,NM_003476,NM_019028	chr11,chr11,chr11	-,-,+	CSRP3,CSRP3,ZDHHC13	7854,7913,-76880
chr13:46658459-46659108	chr13	+	46658514	46658805	True	NM_001872,NM_152719	chr13,chr13	-,+	CPB2,SPERT	20476,-382135
chr19:54850843-54851282	chr19	+	54850933	54851301	True	NM_012276,NM_001005367	chr19,chr19	-,+	LILRA4,TTYH1	-512,75303
chr19:59028879-59029436	chr19	+	59028899	59029369	True	NM_012254,NM_032792,NM_005762	chr19,chr19,chr19	-,-,+	SLC27A5,ZBTB45,TRIM28	-5467,1602,26466
chr6:82957400-82957627	chr6	+	82957399	82957577	True	NM_006670,NM_015525	chr6,chr6	+,-	TPBG,IBTK	115345,-19
chr11:6499067-6499509	chr11	+	6499074	6499500	True	NM_012192,NM_006458,NM_033278,NM_012402	chr11,chr11,chr11,chr11	+,-,-,-	FXC1,TRIM3,TRIM3,ARFIP2	3176,-3869,-3869,3145
chr7:11011856-11012952	chr7	+	11012077	11012946	True	NM_002489,NR_033435,NM_014660,NR_033436	chr7,chr7,chr7,chr7	-,+,+,+	NDUFA4,PHF14,PHF14,PHF14	-32264,552,552,552
chr10:123687605-123687841	chr10	+	123687612	123687882	True	NM_001001976,NM_206861,NM_007041	chr10,chr10,chr10	-,+,-	ATE1,TACC2,ATE1	-66,60806,-66
chr20:34287730-34289530	chr20	+	34287814	34289134	True	NR_037570,NM_001198989,NM_021100,NM_080748	chr20,chr20,chr20,chr20	-,-,-,+	NFS1,NFS1,NFS1,ROMO1	-527,-527,-527,-639
chr4:185221433-185222186	chr4	+	185221716	185222067	True	NM_152683,NM_153343	chr4,chr4	+,-	CCDC111,ENPP6	348699,-82602
chr8:82632816-82633429	chr8	+	82632899	82633120	True	NM_001170797,NM_001170796,NM_024699,NR_033196,NR_033194,NR_033195,NR_033193,NM_152284	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,-,-,-,+	ZFAND1,ZFAND1,ZFAND1,ZFAND1,ZFAND1,ZFAND1,ZFAND1,CHMP4C	470,470,470,470,470,470,470,11567
chr6:127664349-127664562	chr6	+	127664371	127664505	True	NM_001105544,NM_001105545,NM_001139510,NM_030963,NM_001002030,NM_018479	chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,+,-,-	ECHDC1,ECHDC1,ECHDC1,RNF146,ECHDC1,ECHDC1	299,299,-819,-76402,299,299
chr20:23110353-23110563	chr20	+	23110501	23110575	True	NR_034149,NM_001052	chr20,chr20	-,+	LOC200261,SSTR4	2748,-94498
chr7:5919035-5919678	chr7	+	5919058	5919710	True	NM_001097622,NM_001099697	chr7,chr7	+,-	OCM,RSPH10B2	718,90654
chr1:165739494-165741324	chr1	+	165739655	165741018	True	NM_019026,NM_012474	chr1,chr1	-,+	TMCO1,UCK2	-1520,55713
chr19:48972734-48972938	chr19	+	48972809	48972939	True	NM_017457,NM_004228,NM_001080434,NM_170720	chr19,chr19,chr19,chr19	+,+,-,+	CYTH2,CYTH2,LMTK3,KCNJ14	-395,-395,43557,-8354
chr1:46805528-46805831	chr1	+	46805594	46805678	True	NM_006369,NM_199044	chr1,chr1	-,+	LRRC41,NSUN4	-36556,711
chr10:93561930-93562990	chr10	+	93562001	93562895	True	NM_025235,NM_152429	chr10,chr10	+,-	TNKS2,FGFBP3	-3916,106413
chr9:95629686-95630932	chr9	+	95630009	95630662	True	NM_001007101,NR_026868,NM_031486	chr9,chr9,chr9	-,+,-	ZNF484,ANKRD19,ZNF484	9659,-58167,9679
chrX:13739619-13741136	chrX	+	13739644	13740842	True	NM_001011658,NM_003611	chrX,chrX	-,+	TRAPPC2,OFD1	11962,11989
chr22:18120437-18121079	chr22	+	18120492	18121008	True	NM_001696,NM_001039366,NM_001039367,NM_015367	chr22,chr22,chr22,chr22	-,-,-,+	ATP6V1E1,ATP6V1E1,ATP6V1E1,BCL2L13	-8904,-8904,-8904,476
chr16:89682218-89682732	chr16	+	89682231	89682683	True	NM_001083314,NM_001128141,NM_004413	chr16,chr16,chr16	-,+,+	CHMP1A,DPEP1,DPEP1	41496,-2566,4316
chr12:108153564-108153998	chr12	+	108153564	108154003	True	NM_012406,NM_203436	chr12,chr12	-,+	PRDM4,ASCL4	970,14158
chr17:38075312-38075778	chr17	+	38075330	38075692	True	NM_139280,NM_001042471,NM_018530,NM_001165959,NM_001165958,NM_001195545	chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,+	ORMDL3,GSDMB,GSDMB,GSDMB,GSDMB,LOC100505591	8242,-427,-1537,-427,-427,22034
chr17:79849685-79849933	chr17	+	79849687	79849931	True	NM_016476,NM_005782,NM_001002249,NM_001002248,NM_001002247,NM_001002246,NM_001002245,NM_001002244	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,-,+,+,+,+,+,+	ANAPC11,THOC4,ANAPC11,ANAPC11,ANAPC11,ANAPC11,ANAPC11,ANAPC11	-139,-225,62,-139,-139,-139,-139,-139
chr11:47208305-47208764	chr11	+	47208309	47208652	True	NM_032389,NM_000107,NM_001184974,NM_001184975,NM_016223	chr11,chr11,chr11,chr11,chr11	-,+,-,-,-	ARFGAP2,DDB2,PACSIN3,PACSIN3,PACSIN3	-9890,27840,-299,-877,-299
chr10:100206062-100206276	chr10	+	100206062	100206124	True	NM_182639,NM_014472,NM_000195	chr10,chr10,chr10	-,+,-	HPS1,C10orf28,HPS1	630,-311732,630
chr4:106623451-106624097	chr4	+	106623677	106624145	True	NM_020395,NM_001031720,NM_024751,NM_001142471	chr4,chr4,chr4,chr4	-,+,+,-	INTS12,GSTCD,GSTCD,INTS12	5793,7824,5795,5793
chr1:13493553-13494836	chr1	+	13493653	13494847	True	NM_001045480,NM_001099850	chr1,chr1	+,-	PRAMEF16,PRAMEF18	406,-16084
chr1:13493553-13494836	chr1	+	13714486	13715681	False	NM_001099850,NM_001099851	chr1,chr1	-,+	PRAMEF18,PRAMEF17	-16081,406
chr17:78012913-78013823	chr17	+	78013463	78013824	True	NM_017950,NM_019020	chr17,chr17	+,-	CCDC40,TBC1D16	-3087,-3816
chr17:39769173-39769665	chr17	+	39769209	39769623	True	NM_005801,NM_005557	chr17,chr17	+,-	EIF1,KRT16	75503,-130
chr6:150071415-150072172	chr6	+	150071524	150072159	True	NM_005389,NM_198887	chr6,chr6	+,-	PCMT1,NUP43	-744,-3836
chr14:64972168-64972970	chr14	+	64972259	64972669	True	NM_006977,NM_001123329,NM_014950	chr14,chr14,chr14	-,+,+	ZBTB25,ZBTB1,ZBTB1	-1705,-1018,-1018
chr16:22104521-22105388	chr16	+	22104708	22105042	True	NM_173615,NR_033694	chr16,chr16	+,-	VWA3A,PDZD9	-897,-92277
chr17:55163589-55163879	chr17	+	55163649	55163919	True	NM_004645,NM_003488	chr17,chr17	-,+	COIL,AKAP1	-125238,-1147
chr17:7345299-7346007	chr17	+	7345469	7346005	True	NM_000747,NM_001128833,NM_178518,NM_004112	chr17,chr17,chr17,chr17	+,-,+,+	CHRNB1,ZBTB4,TMEM102,FGF11	2400,36989,-6758,-2831
chr17:9929435-9929885	chr17	+	9929460	9929774	True	NM_004246,NM_001130831	chr17,chr17	+,-	GLP2R,GAS7	-200130,-41
chr1:161370697-161371591	chr1	+	161370815	161371333	True	NM_001013625,NM_003001	chr1,chr1	-,+	C1orf192,SDHC	-33151,-86708
chr16:29759005-29759734	chr16	+	29759010	29759470	True	NM_175900,NM_152338	chr16,chr16	-,+	C16orf54,ZG16	-1670,30090
chr10:114138882-114139734	chr10	+	114139228	114139756	True	NR_028134,NM_203380,NM_203379,NM_016234	chr10,chr10,chr10,chr10	-,+,+,+	GUCY2GP,ACSL5,ACSL5,ACSL5	-22875,-4263,-5370,-3330
chr12:107077999-107078446	chr12	+	107078224	107078444	True	NM_001033050,NM_032491	chr12,chr12	-,+	MTERFD3,RFX4	302535,41
chr8:124734701-124736581	chr8	+	124734830	124736599	True	NM_144963,NM_001003954	chr8,chr8	+,-	FAM91A1,ANXA13	44282,13105
chr3:149150473-149151430	chr3	+	149150917	149151475	True	NM_004617,NM_014220	chr3,chr3	+,-	TM4SF4,TM4SF1	40892,-55349
chr17:76836904-76837184	chr17	+	76836914	76837198	True	NM_030968,NM_025090	chr17,chr17	+,-	C1QTNF1,USP36	183052,21
chr6:35522166-35523753	chr6	+	35522710	35523665	True	NM_003322,NM_007104	chr6,chr6	-,+	TULP1,RPL10A	-42063,-86583
chr2:36584521-36584841	chr2	+	36584570	36584832	True	NR_037631,NM_016441	chr2,chr2	-,+	LOC100288911,CRIM1	-1857,-1251
chr1:149872259-149873700	chr1	+	149872261	149873505	True	NM_175065,NM_016074	chr1,chr1	-,+	HIST2H2AB,BOLA1	-12795,-1157
chr17:66594439-66594890	chr17	+	66594505	66594915	True	NM_212472,NM_017565	chr17,chr17	+,-	PRKAR1A,FAM20A	-86013,2230
chr3:28522515-28523150	chr3	+	28523111	28523190	True	NM_001040432,NM_001134433	chr3,chr3	+,-	ZCWPW2,AZI2	-91185,-132493
chr18:18693984-18694301	chr18	+	18694164	18694237	True	NM_005406,NM_001142966	chr18,chr18	-,+	ROCK1,GREB1L	-2352,127965
chr9:113800752-113801012	chr9	+	113800800	113800890	True	NM_057159,NM_001401,NM_005592	chr9,chr9,chr9	-,-,+	LPAR1,LPAR1,MUSK	-435,-435,-369800
chr16:57663208-57663479	chr16	+	57663285	57663469	True	NM_001145771,NM_001145770,NM_001145773,NM_001145772,NM_001145774,NM_033212,NM_201525,NM_201524,NM_005682	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,-,+,+,+	GPR56,GPR56,GPR56,GPR56,GPR56,CCDC102A,GPR56,GPR56,GPR56	-917,-9426,-917,-917,9737,-92808,-917,-917,-9426
chr5:139685390-139687159	chr5	+	139685616	139686782	True	NM_031467,NM_002622	chr5,chr5	+,-	SLC4A9,PFDN1	53004,-2927
chr7:64613082-64613871	chr7	+	64613315	64613532	True	NR_027393,NM_001007253	chr7,chr7	+,-	INTS4L1,ERV3	-11770,-146191
chr7:64613082-64613871	chr7	+	65124592	65124731	False	NM_000181,NR_027392	chr7,chr7	-,+	GUSB,INTS4L2	322627,-11876
chr7:64613082-64613871	chr7	-	65007749	65007888	False	NM_000181,NR_027392	chr7,chr7	-,+	GUSB,INTS4L2	439473,104888
chr19:8372098-8372801	chr19	+	8372239	8372827	True	NM_001031,NM_016579,NM_001165895	chr19,chr19,chr19	+,-,-	RPS28,CD320,CD320	13556,463,463
chr2:178127491-178128412	chr2	+	178127598	178128270	True	NM_194247,NM_006164,NR_036075,NM_001145412,NM_001145413	chr2,chr2,chr2,chr2,chr2	+,-,-,-,-	HNRNPA3,NFE2L2,MIR3128,NFE2L2,NFE2L2	-50233,1639,-6860,397,397
chr4:186872561-186873585	chr4	+	186872675	186873538	True	NM_021069,NM_003265	chr4,chr4	-,+	SORBS2,TLR3	4388,116770
chr6:36302020-36302846	chr6	+	36302184	36302867	True	NM_001010903,NM_001145717	chr6,chr6	-,+	C6orf222,PNPLA1	1846,-63998
chr14:102095710-102096688	chr14	+	102095816	102096452	True	NR_031649,NM_001362	chr14,chr14	-,+	MIR1247,DIO3	-69057,-68179
chr3:183966763-183967136	chr3	+	183966767	183967172	True	NM_005787,NM_001006941,NR_030410,NM_032331,NM_014693,NR_024534,NR_024533	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,+,+,+,-,-	ALG3,ALG3,MIR1224,ECE2,ECE2,ALG3,ALG3	-8,192,-7625,272,272,-8,-8
chr1:156163546-156163882	chr1	+	156163602	156163922	True	NM_014655,NM_198406	chr1,chr1	+,-	SLC25A44,PAQR6	-3,53920
chr19:9413593-9414224	chr19	+	9413762	9414264	True	NM_001202406,NM_198535	chr19,chr19	+,-	ZNF559,ZNF699	20183,1581
chr3:185304494-185305444	chr3	+	185304557	185305296	True	NM_021627,NM_139248	chr3,chr3	+,-	SENP2,LIPH	-577,-34188
chr14:23512193-23512777	chr14	+	23512437	23512739	True	NM_001099780,NM_001144932,NM_002797,NM_001130725	chr14,chr14,chr14,chr14	+,-,-,-	PSMB11,PSMB5,PSMB5,PSMB5	-1112,-8083,-8083,-8008
chr1:6259854-6260058	chr1	+	6259971	6260100	True	NM_000983,NM_207396	chr1,chr1	-,+	RPL22,RNF207	-292,6088
chr11:18053543-18054251	chr11	+	18053655	18054084	True	NM_054031,NM_004179	chr11,chr11	+,-	MRGPRX3,TPH1	88417,8310
chr20:46990026-46990399	chr20	+	46990151	46990240	True	NR_026958,NM_020820	chr20,chr20	+,-	LOC284749,PREX1	-1555,454241
chr19:819807-820678	chr19	+	819938	820361	True	NM_001700,NM_024888,NR_036154	chr19,chr19,chr19	+,-,+	AZU1,LPPR3,MIR3187	7469,1648,-6405
chr12:40456896-40457474	chr12	+	40457011	40457477	True	NM_052885,NM_198578	chr12,chr12	-,+	SLC2A13,LRRK2	42234,161335
chrX:153990476-153990884	chrX	+	153990655	153990869	True	NM_080612,NR_002969,NM_001363,NM_001142463	chrX,chrX,chrX,chrX	-,+,+,+	GAB3,SNORA36A,DKC1,DKC1	-11307,5933,161,161
chrX:87349955-87351472	chrX	+	87350305	87351517	True	NM_019117,NM_001145414	chrX,chrX	+,-	KLHL4,CHM	-577652,-2047739
chr19:37341575-37342075	chr19	+	37341651	37342109	True	NM_003419,NM_206894	chr19,chr19	+,-	ZNF345,ZNF790	-435,-12367
chr1:231007988-231008765	chr1	+	231008129	231008571	True	NM_001136494,NM_032800,NM_022786	chr1,chr1,chr1	-,-,+	C1orf198,C1orf198,ARV1	-2794,-3827,106251
chr12:6695489-6696070	chr12	+	6695748	6695816	True	NR_003012,NM_002046	chr12,chr12	-,+	SCARNA11,GAPDH	-4973,-52142
chr8:140714395-140714603	chr8	+	140714502	140714584	True	NM_016601,NM_017444	chr8,chr8	-,+	KCNK9,CHRAC1	765,806816
chr13:50265781-50265989	chr13	+	50265789	50265993	True	NM_032565,NM_138450	chr13,chr13	-,+	EBPL,ARL11	-166,-63405
chr4:89204904-89205131	chr4	+	89204908	89205154	True	NM_001165136,NM_152542	chr4,chr4	+,-	HERC6,PPM1K	94736,784
chr9:211563-212187	chr9	+	211725	212216	True	NM_203447,NM_152569	chr9,chr9	+,-	DOCK8,C9orf66	2648,3730
chr3:137845692-137846338	chr3	+	137846038	137846112	True	NM_014154,NM_016161	chr3,chr3	+,-	ARMC8,A4GNT	60035,5173
chr3:49042600-49044306	chr3	+	49042663	49044035	True	NM_001009996,NM_018031	chr3,chr3	-,+	DALRD3,WDR6	12032,601
chr22:36043885-36045476	chr22	+	36044078	36045036	True	NM_203377,NM_030641	chr22,chr22	-,+	MB,APOL6	-24677,-123
chr13:53192767-53193233	chr13	+	53192883	53193094	True	NM_001011724,NM_001011725,NM_001011705	chr13,chr13,chr13	+,+,-	HNRNPA1L2,HNRNPA1L2,LECT1	-1337,-1337,120914
chr8:7957736-7958799	chr8	+	7958254	7958430	True	NR_031689,NR_024362	chr8,chr8	-,+	MIR548I3,FLJ10661	-11643,127661
chr8:7957736-7958799	chr8	-	7044115	7044291	False	NR_027000,NM_001164452	chr8,chr8	-,+	LOC349196,FAM90A14	76773,70134
chr15:65318359-65319253	chr15	+	65318520	65319238	True	NM_178859,NM_139242	chr15,chr15	+,-	OSTBETA,MTFMT	18469,2789
chr20:44106371-44107405	chr20	+	44106973	44107123	True	NM_006103,NM_006652	chr20,chr20	+,-	WFDC2,SPINT3	-8630,37191
chr21:31588017-31588276	chr21	+	31588020	31588264	True	NM_199328,NM_181599	chr21,chr21	-,+	CLDN8,KRTAP13-1	255,180127
chr20:30641672-30642200	chr20	+	30641741	30642117	True	NM_030815,NM_002110,NM_001172129,NM_001172131,NM_001172130,NM_001172133,NM_001172132	chr20,chr20,chr20,chr20,chr20,chr20,chr20	-,+,+,+,+,+,+	PDRG1,HCK,HCK,HCK,HCK,HCK,HCK	-101858,-1801,-1801,-1801,-1801,-1801,-1801
chr10:71927912-71928270	chr10	+	71927917	71928090	True	NM_001142648,NM_018649,NM_020150	chr10,chr10,chr10	-,+,-	SAR1A,H2AFY2,SAR1A	2254,-115611,2254
chr1:167522138-167522537	chr1	+	167522340	167522552	True	NM_003851,NM_052862	chr1,chr1	-,+	CREG1,RCSD1	554,76921
chr17:35294577-35294881	chr17	+	35294679	35294925	True	NM_198837,NM_005568	chr17,chr17	-,+	ACACA,LHX1	361817,-22
chr3:69129620-69131523	chr3	+	69129693	69131487	True	NM_006407,NM_003968,NM_198195	chr3,chr3,chr3	+,-,-	ARL6IP5,UBA3,UBA3	2602,-169,-169
chrX:101967067-101967507	chrX	+	101967076	101967148	True	NM_030639,NM_001184875,NM_001184874,NM_001184876,NM_001004051,NM_138437,NM_001142528,NM_021992,NM_001142525,NM_001142524,NM_001142527,NM_001142526	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,+,+,-,+,+,+,+	BHLHB9,GPRASP2,GPRASP2,GPRASP2,GPRASP2,GPRASP2,BHLHB9,TMSB15A,BHLHB9,BHLHB9,BHLHB9,BHLHB9	8493,-23,-23,-23,-23,-23,8493,-195377,8493,8493,8493,8493
chr7:44182634-44183640	chr7	+	44182905	44183467	True	NM_021223,NM_001129	chr7,chr7	-,+	MYL7,AEBP1	-1989,-39004
chr1:47901553-47902267	chr1	+	47901592	47902194	True	NR_026878,NM_004474	chr1,chr1	-,+	MGC12982,FOXD2	-1279,46
chr15:30685045-30685319	chr15	+	30685157	30685345	True	NM_148911,NM_139320,NR_026858	chr15,chr15,chr15	-,-,+	CHRFAM7A,CHRFAM7A,FAM7A1	569,569,179412
chr16:18583361-18584133	chr16	+	18583553	18584125	True	NR_003569,NM_173614	chr16,chr16	+,-	ABCC6P1,NOMO2	-1034,-10119
chr16:18583361-18584133	chr16	-	14917233	14917284	False	NR_023387,NM_014287	chr16,chr16	-,+	ABCC6P2,NOMO1	1326,10358
chr16:18583361-18584133	chr16	-	16315996	16316091	False	NM_001171,NM_001079528,NM_001004067	chr16,chr16,chr16	-,-,+	ABCC6,ABCC6,NOMO3	1287,1287,10297
chr16:1022500-1022791	chr16	+	1022611	1022821	True	NR_033646,NR_033645,NM_014587,NR_036442,NM_022773	chr16,chr16,chr16,chr16,chr16	-,-,+,-,-	LMF1,LMF1,SOX8,LMF1,LMF1	-1627,8547,8986,8547,-1627
chr9:99962420-99964182	chr9	+	99962643	99963606	True	NM_199005,NR_036526	chr9,chr9	-,+	ZNF322B,LOC100499484	-733,37101
chr11:110561721-110562744	chr11	+	110562090	110562788	True	NM_020809,NM_004109	chr11,chr11	-,+	ARHGAP20,FDX1	20713,-261547
chr4:114682554-114682755	chr4	+	114682568	114682628	True	NM_001221,NM_172115,NM_172129,NM_172127,NM_172114,NM_172128,NR_031641	chr4,chr4,chr4,chr4,chr4,chr4,chr4	-,-,-,-,-,-,+	CAMK2D,CAMK2D,CAMK2D,CAMK2D,CAMK2D,CAMK2D,MIR1243	505,505,505,505,505,505,-654600
chr3:131079133-131079607	chr3	+	131079134	131079462	True	NR_002949,NR_002985,NR_027766	chr3,chr3,chr3	+,-,+	NUDT16P1,SNORA58,NUDT16P1	1226,118665,1255
chr12:48919112-48919482	chr12	+	48919245	48919421	True	NM_001005203,NM_002289	chr12,chr12	+,-	OR8S1,LALBA	-7,44464
chr17:26927989-26928456	chr17	+	26928101	26928500	True	NM_003170,NM_006461	chr17,chr17	+,-	SUPT6H,SPAG5	60801,-2045
chr16:72125299-72126163	chr16	+	72125398	72125808	True	NM_001142317,NM_017853,NM_014003,NM_001142318	chr16,chr16,chr16,chr16	-,-,+,-	TXNL4B,TXNL4B,DHX38,TXNL4B	2018,1789,1806,2465
chrX:70571529-70572786	chrX	+	70571833	70572821	True	NM_001171162,NM_004606	chrX,chrX	-,+	ZMYM3,TAF1	-96786,13292
chrX:70571529-70572786	chrX	-	70634059	70634370	False	NR_002226,NM_138923	chrX,chrX	-,+	INGX,TAF1	78295,-48003
chr6:31802102-31802413	chr6_qbl_hap6	+	3095808	3096063	False	NM_001040437,NR_002745,NM_005527,NR_002742,NM_005346,NM_001040438	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,SNORD52,HSPA1B,C6orf48	288,635,-19326,2445,-6696,288
chr6:31802102-31802413	chr6_dbb_hap3	+	3087736	3087991	False	NM_001040437,NR_002745,NM_005527,NR_002742,NM_005346,NM_001040438	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,SNORD52,HSPA1B,C6orf48	288,635,-19314,2447,-6688,288
chr6:31802102-31802413	chr6	+	31802149	31802404	True	NM_001040437,NR_002745,NM_005527,NR_002742,NM_005346,NM_001040438	chr6,chr6,chr6,chr6,chr6,chr6	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,SNORD52,HSPA1B,C6orf48	288,635,-19314,2448,-6688,288
chr6:31802102-31802413	chr6_apd_hap1	+	3116903	3117158	False	NM_001040437,NR_002745,NM_005527,NR_002742,NM_005346,NM_001040438	chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,SNORD52,HSPA1B,C6orf48	288,635,-19307,2449,-6678,288
chr6:31802102-31802413	chr6_cox_hap2	+	3311725	3311980	False	NM_001040437,NR_002745,NM_005527,NR_002742,NM_005346,NM_001040438	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,SNORD52,HSPA1B,C6orf48	288,635,-19310,2446,-6682,288
chrX:12921477-12923212	chrX	+	12921524	12922984	True	NM_138636,NR_030727	chrX,chrX	+,-	TLR8,LOC349408	1754,38485
chr1:28843605-28844355	chr1	+	28843666	28844314	True	NM_001269,NM_001048195,NM_001048194,NR_003077	chr1,chr1,chr1,chr1	+,+,+,-	RCC1,RCC1,RCC1,SNORD99	430,430,430,61070
chr14:92985021-92985873	chr14	+	92985192	92985618	True	NM_001008530,NM_024832	chr14,chr14	-,+	LGMN,RIN3	229479,-5118
chr16:22306010-22306469	chr16	+	22306215	22306410	True	NM_018119,NM_001802	chr16,chr16	+,-	POLR3E,CDR2	2330,79591
chrX:11684592-11685168	chrX	+	11684643	11685222	True	NM_078628,NM_013427,NM_006125	chrX,chrX,chrX	+,-,-	MSL3,ARHGAP6,ARHGAP6	91055,-822,-822
chr14:21273810-21274885	chr14	+	21273810	21274700	True	NM_198232,NM_005615,NM_198234,NM_002933,NM_198235	chr14,chr14,chr14,chr14,chr14	-,+,-,-,-	RNASE1,RNASE6,RNASE1,RNASE1,RNASE1	-3252,-24651,-2774,-2774,-2774
chr20:56068439-56068685	chr20	+	56068502	56068694	True	NM_002591,NM_080618	chr20,chr20	+,-	PCK1,CTCFL	67442,31510
chr4:57253188-57253499	chr4	+	57253187	57253489	True	NM_006452,NM_181806	chr4,chr4	+,-	PAICS,AASDH	48425,199
chr17:39204996-39206385	chr17	+	39205019	39205555	True	NM_033032,NM_001123387,NM_030967,NM_033061	chr17,chr17,chr17,chr17	-,-,-,+	KRTAP2-2,KRTAP2-1,KRTAP1-1,KRTAP4-7	5965,-1451,-7306,34903
chr2:29046702-29047571	chr2	+	29046901	29047073	True	NM_001008779,NM_017910	chr2,chr2	+,-	SPDYA,TRMT61B	-8096,46158
chr20:46030311-46030535	chr20	+	46030430	46030540	True	NM_183048,NR_024594	chr20,chr20	-,+	ZMYND8,LOC100131496	-44956,-83235
chr19:18111370-18111698	chr19	+	18111585	18111677	True	NM_001025604,NM_015683,NM_005535	chr19,chr19,chr19	+,+,-	ARRDC2,ARRDC2,IL12RB1	266,7299,86070
chr11:119215497-119216456	chr11	+	119215605	119216398	True	NM_015645,NM_032015,NM_031433	chr11,chr11,chr11	-,+,-	C1QTNF5,RNF26,MFRP	1036,-10419,1036
chr19:10444950-10445332	chr19	+	10445057	10445325	True	NM_002162,NM_133452,NM_003259	chr19,chr19,chr19	-,-,+	ICAM3,RAVER1,ICAM5	5070,-743,-44453
chr8:57128218-57129077	chr8	+	57128364	57129114	True	NM_001011669,NM_001011668,NM_001011667,NM_001011670,NM_001011671,NM_024300,NM_001114634,NM_001114635,NM_002655	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	+,+,+,+,+,+,-,-,-	CHCHD7,CHCHD7,CHCHD7,CHCHD7,CHCHD7,CHCHD7,PLAG1,PLAG1,PLAG1	-4105,-4105,-4105,-4105,-4105,-4105,-4505,-4505,-4505
chr6:56355821-56357389	chr6	+	56356046	56357121	True	NM_152731,NM_015548	chr6,chr6	+,-	BEND6,DST	462651,150628
chr19:53665827-53666377	chr19	+	53666118	53666290	True	NM_032584,NM_173856,NM_001172674,NM_001172675	chr19,chr19,chr19,chr19	-,+,-,-	ZNF347,VN1R2,ZNF347,ZNF347	-3796,95254,-3805,-3796
chr16:3163482-3163841	chr16	+	3163514	3163788	True	NM_001042428,NR_024167,NR_024166,NM_003456	chr16,chr16,chr16,chr16	+,-,-,+	ZNF205,MGC3771,MGC3771,ZNF205	-1002,1861,1861,-1002
chr2:143892294-143894144	chr2	+	143892688	143894144	True	NM_018460,NM_018557	chr2,chr2	+,-	ARHGAP15,LRP1B	-5850,-1003418
chr1:153942037-153942495	chr1	+	153942036	153942102	True	NM_130898,NM_014437,NM_006694	chr1,chr1,chr1	+,-,-	CREB3L4,SLC39A1,JTB	-1690,-1848,8405
chrX:70471507-70472825	chrX	+	70471538	70472459	True	NM_001171163,NM_005096,NM_000166,NM_201599,NM_001171162	chrX,chrX,chrX,chrX,chrX	-,-,+,-,-	ZMYM3,ZMYM3,GJB1,ZMYM3,ZMYM3	2090,2090,-28533,1629,2638
chr1:155949635-155951458	chr1	+	155949727	155951454	True	NM_001162383,NM_004723,NM_181885,NM_001162384	chr1,chr1,chr1,chr1	-,-,+,-	ARHGEF2,ARHGEF2,RXFP4,ARHGEF2	-1391,-1761,-38298,-1391
chr8:81084046-81085117	chr8	+	81084465	81085035	True	NM_005079,NM_001025253,NM_001105539	chr8,chr8,chr8	-,-,+	TPD52,TPD52,ZBTB10	-629,-629,313412
chrX:74504796-74505916	chrX	+	74505026	74505822	True	NM_004299,NR_030774	chrX,chrX	-,+	ABCB7,UPRT	-128894,-11183
chr9:38063671-38065172	chr9	+	38063687	38065142	True	NM_003028,NM_024345	chr9,chr9	-,+	SHB,DCAF10	4125,-262954
chr7:95058517-95059703	chr7	+	95058788	95059576	True	NM_145872,NM_001018161,NM_000305	chr7,chr7,chr7	+,-,-	ASB4,PON2,PON2	55636,4858,4858
chr1:33638916-33640731	chr1	+	33638944	33640408	True	NM_152493,NM_018207	chr1,chr1	+,-	ZNF362,TRIM62	81765,7313
chr13:93928286-93928540	chr13	+	93928441	93928575	True	NM_001129889,NM_005708	chr13,chr13	-,+	DCT,GPC6	1203411,-49418
chr2:170336835-170337481	chr2	+	170336837	170337167	True	NM_152384,NM_024622	chr2,chr2	+,-	BBS5,FASTKD1	-888,93315
chr9:47166035-47166274	chr9	+	47166092	47166268	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-3535362,-478577
chr9:47166035-47166274	chr9	-	67683190	67683268	False	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	110971,243492
chr9:47166035-47166274	chr9	-	46274399	46274449	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2643669,413116
chr9:47166035-47166274	chr9	+	45108870	45108920	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-118685,-1478140
chr9:47166035-47166274	chr9	-	44761952	44762010	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	228225,-1131222
chr22:19118046-19118760	chr22	+	19118096	19118784	True	NM_053006,NM_005137,NM_001173533,NM_001184781,NM_001173534,NR_033674	chr22,chr22,chr22,chr22,chr22,chr22	+,-,-,-,-,-	TSSK2,DGCR2,DGCR2,DGCR2,DGCR2,DGCR2	-21,-8129,-8129,-8129,-8129,-8129
chr7:140623882-140624162	chr7	+	140623920	140624090	True	NM_001195278,NM_004333	chr7,chr7	+,-	LOC100131199,BRAF	149941,524
chr19:53237409-53237624	chr19	+	53237454	53237672	True	NR_023311,NM_001161499,NM_001161500,NM_001161501,NM_030972	chr19,chr19,chr19,chr19,chr19	+,-,-,-,-	ZNF137P,ZNF611,ZNF611,ZNF611,ZNF611	-137568,685,685,675,-4319
chr15:90233529-90233733	chr15	+	90233598	90233744	True	NM_003847,NM_020212	chr15,chr15	-,+	PEX11A,WDR93	264,283
chr2:143670573-143672518	chr2	+	143670832	143672520	True	NM_018557,NM_003937	chr2,chr2	-,+	LRP1B,KYNU	-781562,-35698
chr22:21318699-21318993	chr22	+	21318732	21318924	True	NM_001018060,NM_001008695,NR_027464,NM_001146288,NM_144704	chr22,chr22,chr22,chr22,chr22	+,-,+,+,+	AIFM3,THAP7,AIFM3,AIFM3,AIFM3	493,37530,2522,2522,493
chr4:122134736-122135405	chr4	+	122135169	122135445	True	NR_024365,NM_001128843	chr4,chr4	+,-	LOC100192379,TNIP3	550294,2260
chr6:66390857-66392555	chr6	+	66390884	66392586	True	NM_001142800,NR_026540	chr6,chr6	-,+	EYS,MCART3P	24594,105185
chr1:165897163-165897727	chr1	+	165897418	165897753	True	NM_019026,NR_037431	chr1,chr1	-,+	TMCO1,MIR3658	-159283,-20314
chr19:346530-347451	chr19	+	346872	347072	True	NM_017550,NM_130760	chr19,chr19	-,+	MIER2,MADCAM1	-2081,149417
chr18:3881215-3881498	chr18	+	3881387	3881543	True	NR_024101,NM_004746	chr18,chr18	+,-	FLJ35776,DLGAP1	-287326,-1252
chr1:182919746-182921213	chr1	+	182919837	182921022	True	NM_030933,NM_002293	chr1,chr1	-,+	SHCBP1L,LAMC1	1588,71572
chr20:13052980-13054769	chr20	+	13053023	13054666	True	NM_018327,NM_017714	chr20,chr20	+,-	SPTLC3,TASP1	-63447,564967
chr7:27223192-27223631	chr7	+	27223434	27223631	True	NM_005523,NM_018951,NR_037940,NR_002795,NM_153715,NR_037939	chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,+,-,-	HOXA11,HOXA10,HOXA10-HOXA9,HOXA11-AS1,HOXA10,HOXA10	1254,-9479,-3554,1395,-3558,-3554
chr2:200774222-200775195	chr2	+	200774485	200775019	True	NM_001039693,NM_153689	chr2,chr2	-,+	C2orf60,C2orf69	45490,959
chr20:54985184-54985649	chr20	+	54985189	54985464	True	NM_020356,NM_001164114,NM_001164115,NM_001164116,NM_198437	chr20,chr20,chr20,chr20,chr20	+,+,+,+,-	CASS4,CASS4,CASS4,CASS4,AURKA	1849,1849,1849,1703,-17838
chr15:97297617-97298958	chr15	+	97298454	97298946	True	NM_173499,NR_024172	chr15,chr15	+,-	SPATA8,LOC91948	27732,1118769
chr12:12967770-12968698	chr12	+	12967899	12968667	True	NM_016355,NM_201224,NM_006143	chr12,chr12,chr12	+,+,-	DDX47,DDX47,GPR19	-1678,-1678,-118778
chr19:15917628-15919381	chr19	+	15917841	15919127	True	NM_013940,NM_001004466	chr19,chr19	-,+	OR10H1,OR10H5	-37,-13040
chr14:76130399-76132055	chr14	+	76130571	76131864	True	NM_015072,NM_007176	chr14,chr14	+,-	TTLL5,C14orf1	-3075,-3033
chr5:137675416-137676040	chr5	+	137675462	137676056	True	NM_001135647,NM_001790,NM_022809,NM_016605	chr5,chr5,chr5,chr5	+,-,-,+	FAM53C,CDC25C,CDC25C,FAM53C	-2300,-7946,-7946,-1820
chrX:86800871-86802746	chrX	+	86801087	86802512	True	NM_019117,NM_001145414	chrX,chrX	+,-	KLHL4,CHM	-28431,-1498521
chr12:44152811-44153011	chr12	+	44152831	44153001	True	NM_016123,NM_001114182,NM_001145256,NM_001145258,NM_001098615,NM_001098614,NM_031292,NM_001145257	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,+,+,-,-,-,+	IRAK4,IRAK4,IRAK4,IRAK4,PUS7L,PUS7L,PUS7L,IRAK4	-135,-135,-135,-135,-270,-269,-235,-135
chrX:38660775-38661114	chrX	+	38660982	38661139	True	NM_001034853,NM_001098790,NM_001098791,NM_021242	chrX,chrX,chrX,chrX	-,+,+,+	RPGR,MID1IP1,MID1IP1,MID1IP1	-474194,-348,-348,1933
chr18:22009465-22009832	chr18	+	22009464	22009533	True	NM_018439,NM_080597	chr18,chr18	+,-	IMPACT,OSBPL1A	-2910,-31674
chr3:143534654-143536029	chr3	+	143534747	143535805	True	NM_173653,NM_173552	chr3,chr3	-,+	SLC9A9,C3orf58	31628,154834
chr19:16240633-16241126	chr19	+	16240771	16241165	True	NM_032855,NM_054113	chr19,chr19	+,-	HSH2D,CIB3	3672,43171
chr20:46605679-46606732	chr20	+	46605703	46606537	True	NR_026958,NM_198596	chr20,chr20	+,-	LOC284749,SULF2	382116,-190343
chr20:46605679-46606732	chr20	-	46998224	46998274	False	NR_026958,NM_020820	chr20,chr20	+,-	LOC284749,PREX1	-9621,446196
chr7:152445341-152446002	chr7	+	152445934	152446038	True	NM_005431,NM_001040135	chr7,chr7	-,+	XRCC2,ACTR3B	-72684,10812
chr9:95710286-95710745	chr9	+	95710291	95710783	True	NM_001083536,NM_031486	chr9,chr9	+,-	FGD3,ZNF484	-741,-70001
chr9:98082703-98083147	chr9	+	98082710	98082987	True	NM_000136,NR_029496	chr9,chr9	-,+	FANCC,MIR24-1	-2719,-234465
chr9:70978079-70980075	chr9	+	70978167	70979924	True	NR_015423,NM_021965	chr9,chr9	-,+	LOC572558,PGM5	-5410,-6403
chr9:70978079-70980075	chr9	-	68803571	68803621	False	NR_002836,NR_034006	chr9,chr9	-,+	PGM5P2,LOC100132352	344283,-77081
chr9:70978079-70980075	chr9	-	69141666	69141716	False	NR_002836,NM_001098805	chr9,chr9	-,+	PGM5P2,ANKRD20A4	6188,240264
chr10:52419014-52419434	chr10	+	52419050	52419482	True	NM_147156,NM_001079516	chr10,chr10	-,+	SGMS1,ASAH2B	-35313,80225
chr7:91569810-91570085	chr7	+	91569809	91570055	True	NM_006980,NM_147185,NM_005751	chr7,chr7,chr7	-,+,+	MTERF,AKAP9,AKAP9	-59793,133,133
chr11:68452982-68453300	chr11	+	68453055	68453297	True	NM_015973,NM_004923	chr11,chr11	+,-	GAL,MTL5	-1123,65741
chr5:173139981-173141874	chr5	+	173140361	173141770	True	NR_027109,NM_138369	chr5,chr5	+,-	LOC285593,BOD1	-133755,-96695
chr11:63273238-63273623	chr11	+	63273518	63273660	True	NM_001142536,NM_001142537,NM_001142535,NM_033101,NM_001142538,NM_054108	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,-	LGALS12,LGALS12,LGALS12,LGALS12,LGALS12,HRASLS5	-45,1798,-45,-45,1798,-14838
chr11:64761976-64762411	chr11	+	64762059	64762311	True	NM_001199745,NM_138456	chr11,chr11	+,-	ARL2,BATF2	19273,2256
chr2:171076076-171076488	chr2	+	171076182	171076397	True	NM_138995,NM_014168	chr2,chr2	+,-	MYO3B,METTL5	-41579,-394829
chr11:10314148-10315257	chr11	+	10314456	10314994	True	NM_030962,NM_001124	chr11,chr11	-,+	SBF2,ADM	810,11647
chr1:111966188-111968103	chr1	+	111966259	111968050	True	NM_001688,NM_002557	chr1,chr1	+,-	ATP5F1,OVGP1	23692,2399
chr1:151227932-151228241	chr1	+	151227951	151228125	True	NM_005997,NM_002810	chr1,chr1	-,+	VPS72,PSMD4	-65311,-805
chr11:128916877-128918094	chr11	+	128917061	128917954	True	NM_000890,NM_014715	chr11,chr11	+,-	KCNJ5,ARHGAP32	-155806,-22973
chr12:101799265-101801183	chr12	+	101799576	101801173	True	NM_152323,NM_001177	chr12,chr12	+,-	SPIC,ARL1	70161,449
chr18:8725946-8727487	chr18	+	8726112	8726924	True	NM_015210,NR_024419	chr18,chr18	+,-	KIAA0802,LOC100192426	-8801,-359080
chr14:23907759-23908130	chr14	+	23907949	23908121	True	NM_000257,NM_001042635	chr14,chr14	-,+	MYH7,NGDN	-3079,30776
chr12:105379560-105380099	chr12	+	105379847	105379919	True	NM_152318,NM_032148	chr12,chr12	+,-	C12orf45,SLC41A2	178,-57375
chr17:61678972-61680008	chr17	+	61678971	61679783	True	NM_016360,NM_030576	chr17,chr17	+,-	TACO1,LIMD2	-794,97794
chr1:151802720-151803150	chr1	+	151802851	151803021	True	NR_024237,NM_001001523,NM_005060	chr1,chr1,chr1	+,-,-	LOC100132111,RORC,RORC	7923,-4298,1377
chr2:231918120-231919254	chr2	+	231918161	231919176	True	NR_033879,NM_002807,NM_001191037,NR_034059	chr2,chr2,chr2,chr2	-,+,+,+	LOC348761,PSMD1,PSMD1,PSMD1	-57414,2401,2401,2401
chr2:197034082-197035732	chr2	+	197034395	197035576	True	NM_001080539,NM_004226	chr2,chr2	+,-	CCDC150,STK17B	468779,810
chr1:87251140-87252695	chr1	+	87251455	87252588	True	NM_016009,NM_004261	chr1,chr1	+,-	SH3GLB1,SEP15	-81249,127572
chr19:56154402-56154715	chr19	+	56154422	56154728	True	NM_016535,NM_016202,NM_013301,NM_001163423,NM_203374,NM_207115	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,-,+	ZNF581,ZNF580,CCDC106,ZNF580,ZNF784,ZNF580	257,-1055,4225,-1010,-18481,-2081
chr2:201982771-201983000	chr2	+	201982872	201983031	True	NM_173822,NM_001202517,NM_001202516,NM_001202519,NM_001127183,NM_001127184,NM_003879	chr2,chr2,chr2,chr2,chr2,chr2,chr2	-,+,+,+,+,+,+	FAM126B,CFLAR,CFLAR,CFLAR,CFLAR,CFLAR,CFLAR	-46480,-2051,-2051,-2051,237,-2051,-2051
chr7:103971804-103972117	chr7	+	103971804	103972127	True	NM_199000,NM_181747	chr7,chr7	+,-	LHFPL3,ORC5	-2754,-123309
chr11:118783324-118784185	chr11	+	118783339	118784207	True	NM_032966,NM_182557	chr11,chr11	+,-	CXCR5,BCL9L	-19289,-1726
chr11:72501532-72502469	chr11	+	72501608	72502430	True	NM_033388,NM_006645	chr11,chr11	+,-	ATG16L2,STARD10	23020,2370
chr11:124767779-124768812	chr11	+	124767879	124768685	True	NM_019055,NM_001037558	chr11,chr11	-,+	ROBO4,HEPN1	-48,20460
chr5:43107044-43108279	chr5	+	43107202	43108098	True	NM_003432,NR_034127	chr5,chr5	+,-	ZNF131,LOC100132356	13543,-40129
chr19:41620968-41622186	chr19	+	41620995	41622180	True	NM_030589,NM_000774	chr19,chr19	-,+	CYP2A7,CYP2F1	-232338,-693
chr17:42736017-42736715	chr17	+	42736201	42736726	True	NM_001099225,NM_001145080	chr17,chr17	-,+	CCDC43,C17orf104	30489,-2498
chr5:162930608-162931216	chr5	+	162930616	162931179	True	NM_182796,NM_145266,NM_013283	chr5,chr5,chr5	+,-,+	MAT2B,NUDCD2,MAT2B	-436,-43473,1405
chr1:15800891-15801408	chr1	+	15800927	15801456	True	NM_015849,NM_001229	chr1,chr1	+,-	CELA2B,CASP9	1139,49534
chr11:27741080-27741827	chr11	+	27741116	27741859	True	NM_170731,NR_033315,NM_170732,NM_001143805,NM_001143807,NM_001143806	chr11,chr11,chr11,chr11,chr11,chr11	-,+,-,-,-,-	BDNF,BDNF-AS1,BDNF,BDNF,BDNF,BDNF	1796,-212768,517,517,-39,517
chr10:71891603-71892091	chr10	+	71891631	71891937	True	NM_032797,NM_001198696,NM_018649	chr10,chr10,chr10	-,-,+	AIFM2,AIFM2,H2AFY2	803,803,-79325
chr5:74062638-74062951	chr5	+	74062667	74062989	True	NM_014886,NM_032380,NM_170681,NM_170691	chr5,chr5,chr5,chr5	+,-,-,-	NSA2,GFM2,GFM2,GFM2	113,103,103,103
chr3:37440509-37441306	chr3	+	37440672	37441350	True	NM_178339,NM_017724,NM_178342	chr3,chr3,chr3	+,-,+	C3orf35,LRRFIP2,C3orf35	24,-222821,24
chr3:101529957-101531171	chr3	+	101529995	101531219	True	NM_001005474,NM_000986	chr3,chr3	+,-	NFKBIZ,RPL24	15614,-124432
chr15:85264286-85266052	chr15	+	85264556	85265676	True	NM_014630,NM_014300	chr15,chr15	+,-	ZNF592,SEC11A	26141,-4882
chr2:114344221-114346082	chr2	+	114345023	114345489	True	NR_024077,NR_024005	chr2,chr2	+,-	WASH2P,DDX11L2	-3848,13714
chr19:15162025-15163038	chr19	+	15162386	15163033	True	NM_006844,NM_012114	chr19,chr19	-,+	ILVBL,CASP14	73595,-2147
chr10:5529937-5530282	chr10	+	5530273	5530331	True	NM_017422,NM_005185	chr10,chr10	-,+	CALML5,CALML3	11252,36592
chr3:33752349-33754125	chr3	+	33752451	33754170	True	NM_015097,NR_027868	chr3,chr3	-,+	CLASP2,PDCD6IP	5728,85895
chr9:109625681-109626121	chr9	+	109625701	109626081	True	NR_031752,NM_021224	chr9,chr9	-,+	MIR548Q,ZNF462	222685,-374
chr16:30394600-30396598	chr16	+	30394866	30396600	True	NM_152652,NM_013292,NM_052838	chr16,chr16,chr16	+,+,-	ZNF48,MYLPF,SEPT1	10456,-8795,-695
chr19:13028161-13029373	chr19	+	13028778	13029244	True	NM_001105578,NM_004343	chr19,chr19	-,+	SYCE2,CALR	892,20169
chrX:65297516-65299150	chrX	+	65297646	65299024	True	NR_029637,NM_007268	chrX,chrX	+,-	MIR223,VSIG4	-58996,-37679
chr10:52641042-52641917	chr10	+	52641049	52641590	True	NM_001098512,NM_138933,NM_138932,NM_014576,NM_001198820,NM_001198818,NM_001198819	chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,-,-,-,-,-,-	PRKG1,A1CF,A1CF,A1CF,A1CF,A1CF,A1CF	109354,3910,3910,3910,3910,3910,3910
chr19:46916022-46916375	chr19	+	46916070	46916422	True	NM_006247,NM_032040	chr19,chr19	+,-	PPP5C,CCDC8	-65870,547
chr5:107007527-107008069	chr5	+	107007543	107008003	True	NM_005246,NM_001962	chr5,chr5	+,-	FER,EFNA5	1075519,-947
chr5:138629238-138629550	chr5	+	138629238	138629474	True	NM_005847,NM_018834,NM_001194956,NM_001194955	chr5,chr5,chr5,chr5	-,+,+,+	SLC23A1,MATR3,MATR3,MATR3	89615,34,-36,-36
chr1:196737978-196739324	chr1	+	196738077	196739203	True	NM_001166624,NM_021023,NM_198503	chr1,chr1,chr1	+,+,-	CFHR3,CFHR3,KCNT2	4726,4726,-160578
chr19:1448564-1449005	chr19	+	1448993	1449053	True	NM_152482,NM_005883	chr19,chr19	-,+	C19orf25,APC2	30225,1094
chr11:57156169-57157676	chr11	+	57156199	57157714	True	NM_002728,NM_006093,NM_002559	chr11,chr11,chr11	-,-,+	PRG2,PRG3,P2RX3	467,-7576,-50301
chr17:73998029-73999369	chr17	+	73998097	73999343	True	NM_001258,NM_007292	chr17,chr17	+,-	CDK3,ACOX1	-1161,-22582
chr19:48497562-48498080	chr19	+	48497711	48498105	True	NM_022142,NM_001128326	chr19,chr19	+,-	ELSPBP1,BSPH1	-36,-2284
chr13:45567490-45568437	chr13	+	45567652	45568119	True	NM_012345,NM_018559	chr13,chr13	-,+	NUFIP1,KIAA1704	-4039,-4016
chr13:114452093-114452327	chr13	+	114452218	114452296	True	NM_182614,NR_028064	chr13,chr13	+,-	FAM70B,LOC100130386	9919,1816
chr13:19919143-19919384	chr13	+	19919178	19919428	True	NR_034026,NR_027248	chr13,chr13	+,-	LOC100287114,ANKRD26P3	-40,-65
chr7:100963833-100964346	chr7	+	100963952	100964020	True	NM_001130821,NM_001130820,NM_022777,NM_001130822,NM_133457	chr7,chr7,chr7,chr7,chr7	-,-,-,-,+	RABL5,RABL5,RABL5,RABL5,EMID2	1123,1123,1123,1123,42101
chr22:21400203-21400638	chr22	+	21400229	21400689	True	NR_002829,NR_027006	chr22,chr22	-,+	P2RX6P,LOC400891	-1691,-31
chr7:127982913-127983344	chr7	+	127982936	127983395	True	NM_000230,NM_001166135,NM_018077	chr7,chr7,chr7	+,-,-	LEP,RBM28,RBM28	-101656,624,624
chr1:117744936-117745152	chr1	+	117745061	117745175	True	NM_024626,NR_030640	chr1,chr1	-,+	VTCN1,MIR942	8424,-107860
chrX:49041190-49041552	chrX	+	49041265	49041601	True	NM_002668,NM_006150	chrX,chrX	+,-	PLP2,PRICKLE3	-13132,1225
chr9:101580750-101581361	chr9	+	101580839	101581405	True	NM_173551,NM_024642	chr9,chr9	-,+	ANKS6,GALNT12	-22045,-10917
chr17:7624650-7624881	chr17	+	7624832	7624916	True	NM_001126114,NM_020877	chr17,chr17	-,+	TP53,DNAH2	-33969,-1844
chr13:21533548-21534440	chr13	+	21534034	21534312	True	NM_022459,NM_005870	chr13,chr13	-,+	XPO4,SAP18	-57121,180340
chr3:184454597-184455800	chr3	+	184454794	184455814	True	NM_001009921,NM_022149	chr3,chr3	+,-	VPS8,MAGEF1	74116,-24958
chr3:193922404-193923524	chr3	+	193922442	193923344	True	NR_024480,NM_005524	chr3,chr3	-,+	LOC100131551,HES1	107310,-68562
chr19:52512365-52513009	chr19	+	52512465	52512723	True	NM_198480,NM_001199324,NM_024840	chr19,chr19,chr19	-,-,+	ZNF615,ZNF615,ZNF613	-982,-982,-81829
chr1:6558119-6558322	chr1	+	6558118	6558314	True	NM_001042664,NM_020631,NM_138697,NM_001042663	chr1,chr1,chr1,chr1	-,-,+,-	PLEKHG5,PLEKHG5,TAS1R1,PLEKHG5	-7478,-6358,57023,-634
chr5:140593503-140594463	chr5	+	140593571	140594483	True	NM_018934,NM_018932,NM_018933,NM_031947	chr5,chr5,chr5,chr5	+,+,+,-	PCDHB14,PCDHB12,PCDHB13,SLC25A2	8594,-5332,-114,89179
chr5:140593503-140594463	chr5	+	140557827	140557879	False	NM_019120,NM_020957,NM_031947,NM_019119,NM_018940	chr5,chr5,chr5,chr5,chr5	+,+,-,+,+	PCDHB8,PCDHB16,SLC25A2,PCDHB9,PCDHB7	-450,3100,125785,9013,-5637
chr9:34628236-34628760	chr9	+	34628241	34628757	True	NM_000155,NM_001017363,NM_147157,NM_024348,NM_007234,NM_005866	chr9,chr9,chr9,chr9,chr9,chr9	+,-,-,-,-,-	GALT,ARID3C,SIGMAR1,DCTN3,DCTN3,SIGMAR1	17877,-230,9061,-7745,-7745,9061
chr2:219822577-219823961	chr2	+	219822587	219823621	True	NM_003936,NM_017521	chr2,chr2	+,-	CDK5R2,FEV	776,26808
chr12:53077590-53079369	chr12	+	53077704	53079321	True	NM_199187,NM_006121	chr12,chr12	+,-	KRT18,KRT1	263333,-3513
chr16:81111635-81112733	chr16	+	81111720	81112402	True	NM_152337,NM_015251,NM_001100873	chr16,chr16,chr16	-,+,-	C16orf46,ATMIN,C16orf46	-848,-42320,-848
chr9:134379072-134379466	chr9	+	134379269	134379465	True	NM_001136114,NM_001136113,NM_001135954,NM_007171,NM_001077365,NM_001077366	chr9,chr9,chr9,chr9,chr9,chr9	+,+,-,+,+,+	POMT1,POMT1,UCK1,POMT1,POMT1,POMT1	-1031,-1031,27247,-1031,-1031,-1031
chr1:173837189-173837452	chr1	+	173837215	173837480	True	NR_002746,NM_032522,NR_003944,NR_037605,NR_003942,NR_003943,NR_003940,NR_003941,NR_002750,NM_001122770,NR_002578,NR_002579,NR_003939,NR_003938	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,+,-,+,-,-,-,-,-,+,-,-,-,-	SNORD47,ZBTB37,SNORD78,LOC100506046,SNORD76,SNORD77,SNORD80,SNORD75,SNORD44,ZBTB37,GAS5,SNORD74,SNORD79,SNORD81	-3632,12,-2391,-4880,-1362,-1706,-3174,-1139,-2049,12,-90,-332,-2647,-3860
chr1:145610999-145611201	chr1	+	145611045	145611207	True	NM_014455,NM_006468	chr1,chr1	+,-	RNF115,POLR3C	-60,-161
chr7:66351948-66353559	chr7	+	66352612	66353608	True	NR_003934,NM_017994	chr7,chr7	-,+	LOC729156,C7orf42	-42799,32594
chr1:55013456-55013966	chr1	+	55013507	55014015	True	NM_015547,NM_147161,NM_176782	chr1,chr1,chr1	+,+,-	ACOT11,ACOT11,FAM151A	17,17,75235
chr2:128781208-128782230	chr2	+	128781435	128782006	True	NM_024545,NM_020120,NM_001145928	chr2,chr2,chr2	-,+,-	SAP130,UGGT1,SAP130	2914,66747,2914
chr19:20022649-20023606	chr19	+	20023064	20023656	True	NM_001145404,NM_031218	chr19,chr19	-,+	ZNF506,ZNF93	-90504,-11393
chr6:15959856-15960763	chr6	+	15959987	15960791	True	NM_013262,NR_036448	chr6,chr6	+,-	MYLIP,DTNBP1	168525,-296698
chr1:67217215-67217541	chr1	+	67217214	67217580	True	NM_005478,NM_152665	chr1,chr1	-,+	INSL5,TCTEX1D1	49412,559
chr20:52681466-52682025	chr20	+	52681538	52682008	True	NM_003657,NM_002623	chr20,chr20	-,+	BCAS1,PFDN4	5346,142493
chr9:130374830-130375393	chr9	+	130374968	130375386	True	NM_003165,NM_001032221,NM_001035534	chr9,chr9,chr9	+,+,-	STXBP1,STXBP1,FAM129B	-533,-533,-33700
chr21:38640456-38641993	chr21	+	38640642	38641903	True	NM_006052,NR_026719	chr21,chr21	-,+	DSCR3,DSCR9	-809,-59744
chr11:66791573-66791937	chr11	+	66791664	66791984	True	NM_177963,NM_001040716,NM_001177880	chr11,chr11,chr11	+,-,+	SYT12,PC,SYT12	-899,-65817,-1525
chr5:43515312-43516431	chr5	+	43515420	43516223	True	NM_198566,NM_012343	chr5,chr5	-,+	C5orf34,NNT	-147,86567
chr13:54878329-54878850	chr13	+	54878509	54878795	True	NR_031628,NM_006418	chr13,chr13	-,+	MIR1297,OLFM4	7438,-1275693
chr19:37564564-37566364	chr19	+	37565405	37566303	True	NM_144689,NM_199126	chr19,chr19	+,-	ZNF420,ZNF585A	3078,97085
chr1:4048941-4050304	chr1	+	4049222	4049536	True	NR_024455,NM_207356	chr1,chr1	+,-	LOC100133612,C1orf174	-232312,-232365
chr4:187060691-187061520	chr4	+	187060864	187061383	True	NM_001006655,NM_015398,NM_021069	chr4,chr4,chr4	+,+,-	FAM149A,FAM149A,SORBS2	8943,4611,-182994
chr9:34642061-34643452	chr9	+	34642855	34643420	True	NM_000155,NM_147157,NM_001142784,NM_005866	chr9,chr9,chr9,chr9	+,-,+,-	GALT,SIGMAR1,IL11RA,SIGMAR1	3214,-5087,8761,-5087
chr5:140766776-140767407	chr5	+	140766872	140767420	True	NM_032087,NM_003736,NM_032098,NM_032088,NM_005642,NM_014004,NM_018920	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,-,+,+	PCDHGA7,PCDHGB4,PCDHGB4,PCDHGA8,TAF7,PCDHGA8,PCDHGA7	-4464,31,31,4062,-66521,4062,-4464
chr14:75996329-75997752	chr14	+	75996558	75997764	True	NM_006399,NM_007176	chr14,chr14	+,-	BATF,C14orf1	-7826,129824
chr1:145073264-145075183	chr1	+	145073594	145075212	True	NM_004892,NM_022359	chr1,chr1	+,-	SEC22B,PDE4DIP	21194,1024
chr10:134971925-134972375	chr10	+	134971985	134972339	True	NR_030170,NM_152643	chr10,chr10	-,+	MIR202,KNDC1	88835,1631
chr20:37352710-37352945	chr20	+	37352718	37352874	True	NM_080552,NR_027241	chr20,chr20	+,-	SLC32A1,LOC388796	230,-288700
chr1:156263922-156265247	chr1	+	156264112	156265172	True	NM_144580,NM_032323,NM_001004319	chr1,chr1,chr1	-,+,-	C1orf85,TMEM79,VHLL	327,-10093,4306
chr6:100440016-100441299	chr6	+	100440083	100441257	True	NM_032503,NM_021620,NM_001040179	chr6,chr6,chr6	-,+,-	MCHR2,PRDM13,MCHR2	907,-385484,892
chr15:98411038-98412475	chr15	+	98411188	98412417	True	NM_183376,NR_024172,NR_024173	chr15,chr15,chr15	+,-,-	ARRDC4,LOC91948,LOC91948	91515,5293,5293
chr17:73720556-73721435	chr17	+	73720692	73721386	True	NM_000154,NM_000213,NM_001005619,NM_001005731	chr17,chr17,chr17,chr17	-,+,+,+	GALK1,ITGB4,ITGB4,ITGB4	39944,-3227,33,-3227
chr1:144936090-144937231	chr1	+	144936143	144937274	True	NM_004892,NM_001002811	chr1,chr1	+,-	SEC22B,PDE4DIP	159132,-4111
chr11:67172883-67173180	chr11	+	67172942	67173194	True	NM_001008709,NM_198517,NM_001166222,NM_206873,NM_002708,NM_020811	chr11,chr11,chr11,chr11,chr11,chr11	-,+,+,-,-,+	PPP1CA,TBC1D10C,CARNS1,PPP1CA,PPP1CA,CARNS1	-3566,-1581,9954,-3566,-3566,9954
chr6:14874487-14875600	chr6	+	14874588	14875646	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	370880,787693
chr1:6552733-6553874	chr1	+	6552809	6553649	True	NM_001042665,NM_001042664,NM_020631,NM_138697,NM_001042663	chr1,chr1,chr1,chr1,chr1	-,-,-,+,-	PLEKHG5,PLEKHG5,PLEKHG5,TAS1R1,PLEKHG5	-6795,-2169,-1049,61688,3885
chr8:24245450-24247315	chr8	+	24245897	24247364	True	NM_003155,NM_014479,NM_001145271,NM_001145272	chr8,chr8,chr8,chr8	-,+,+,+	STC1,ADAMDEC1,ADAMDEC1,ADAMDEC1	-533577,-4150,-4150,-4150
chrX:113816550-113817249	chrX	+	113816563	113817067	True	NM_000868,NM_000640	chrX,chrX	+,-	HTR2C,IL13RA2	1483,435190
chr8:81456331-81457636	chr8	+	81456335	81457424	True	NM_001033723,NM_023929	chr8,chr8	-,+	ZNF704,ZBTB10	329643,-57938
chr2:238971318-238972583	chr2	+	238971423	238972531	True	NM_016510,NM_030768	chr2,chr2	+,-	SCLY,ILKAP	-1919,139843
chr19:48898143-48898550	chr19	+	48898239	48898517	True	NM_000836,NM_006801	chr19,chr19	+,-	GRIN2D,KDELR1	-158,-3429
chr5:76008420-76009136	chr5	+	76008658	76008944	True	NR_028375,NM_001992,NM_004101	chr5,chr5,chr5	+,+,-	NCRUPAR,F2R,F2RL2	-950,2923,-89418
chr9:130713167-130713521	chr9	+	130713333	130713553	True	NM_203305,NM_001006641	chr9,chr9	-,+	FAM102A,SLC25A25	-340,116925
chr1:92765092-92766760	chr1	+	92765366	92766650	True	NM_053274,NM_024813	chr1,chr1	-,+	GLMN,RPAP2	-800,-902
chr2:62903130-62903867	chr2	+	62903235	62903901	True	NM_198276,NM_001142615	chr2,chr2	-,+	TMEM17,EHBP1	-169631,-2310
chr22:38217275-38218003	chr22	+	38217279	38218050	True	NM_138797,NM_003614	chr22,chr22	-,+	ANKRD54,GALR3	22353,1338
chr1:43751268-43751565	chr1	+	43751273	43751597	True	NM_005424,NM_182517,NM_001164829	chr1,chr1,chr1	+,-,-	TIE1,C1orf210,C1orf210	15066,-23,15
chr5:173171091-173171326	chr5	+	173171103	173171227	True	NM_030627,NM_138369	chr5,chr5	+,-	CPEB4,BOD1	144103,-127437
chr3:12299980-12301081	chr3	+	12300655	12300954	True	NM_003256,NM_005037	chr3,chr3	-,+	TIMP4,PPARG	-99804,28394
chr8:75233608-75233828	chr8	+	75233611	75233835	True	NM_018972,NM_020647	chr8,chr8	+,-	GDAP1,JPH1	28782,-49
chr3:169684592-169684899	chr3	+	169684606	169684923	True	NM_003262,NR_027622,NR_024409	chr3,chr3,chr3	+,-,-	SEC62,LOC100128164,LOC100128164	-77,-84,-84
chr19:43690219-43691839	chr19	+	43690585	43691695	True	NM_002781,NM_001130014,NR_026881	chr19,chr19,chr19	-,-,+	PSG5,PSG5,PRG1	103,103,161512
chr19:43690219-43691839	chr19	+	43709940	43709993	False	NM_002780,NR_026881,NM_213633	chr19,chr19,chr19	-,+,-	PSG4,PRG1,PSG4	-150,143214,-150
chr1:224518160-224518755	chr1	+	224518243	224518714	True	NM_002533,NM_206840,NM_014184	chr1,chr1,chr1	-,-,+	NVL,NVL,CNIH4	-371,-371,25880
chr18:502301-503678	chr18	+	502705	503255	True	NM_130386,NM_004066	chr18,chr18	-,+	COLEC12,CETN1	-1976,77113
chr11:82447176-82448364	chr11	+	82447377	82448403	True	NM_145018,NM_175885	chr11,chr11	+,-	C11orf82,FAM181B	164333,-2471
chrX:152908320-152909012	chrX	+	152908414	152908974	True	NM_001395,NM_001135740	chrX,chrX	+,-	DUSP9,PNCK	-568,29819
chr19:6375939-6376207	chr19	+	6375961	6376162	True	NM_004158,NM_032306	chr19,chr19	-,+	PSPN,ALKBH7	-101,-3568
chr2:74008271-74008981	chr2	+	74008549	74008822	True	NM_001080474,NM_003584	chr2,chr2	+,-	C2orf78,DUSP11	2493,-1265
chr8:134072347-134073346	chr8	+	134072491	134073258	True	NM_006748,NM_001204869	chr8,chr8	-,+	SLA,WISP1	20,130023
chr15:78530083-78531571	chr15	+	78530269	78531554	True	NM_015162,NM_018602,NM_001199377	chr15,chr15,chr15	-,+,-	ACSBG1,DNAJA4,ACSBG1	-3220,24932,-3220
chr8:7322973-7324167	chr8	+	7323008	7323962	True	NM_080389,NM_001040702,NM_001040703,NM_016512,NM_058200,NM_058201,NM_058202,NM_058203	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,+,-,-,-,-,-	DEFB104A,DEFB104B,DEFB105B,SPAG11B,SPAG11B,SPAG11B,SPAG11B,SPAG11B	8700,8700,21280,-1816,-1816,-1816,-1816,-1816
chr8:7322973-7324167	chr8	-	7702631	7703585	False	NM_080389,NM_001040702,NM_001081552,NM_152250,NM_058203	chr8,chr8,chr8,chr8,chr8	+,+,+,-,+	DEFB104A,DEFB104B,SPAG11A,DEFB105A,SPAG11B	-8697,-8697,1816,-21271,1816
chr21:33751049-33752018	chr21	+	33751182	33751692	True	NR_002996,NR_026845	chr21,chr21	-,+	SNORA80,C21orf119	-1551,13749
chr1:51843818-51844563	chr1	+	51844151	51844517	True	NM_014372,NM_001144832	chr1,chr1	+,-	RNF11,TTC39A	-142263,-33366
chr9:140010316-140010678	chr9	+	140010398	140010648	True	NM_013379,NM_000832	chr9,chr9	-,+	DPP7,GRIN1	-1203,22960
chr7:102117244-102118392	chr7	+	102117467	102118219	True	NM_006234,NM_152892	chr7,chr7	-,+	POLR2J,LRWD1	1212,-12129
chr7:102117244-102118392	chr7	+	44057324	44057374	False	NM_175064,NR_003655	chr7,chr7	+,-	SPDYE1,POLR2J4	-16886,1424
chr7:102117244-102118392	chr7	+	102211575	102211625	False	NM_001166339,NM_001097615	chr7,chr7	+,-	SPDYE2L,POLR2J3	-19947,1493
chr7:102117244-102118392	chr7	+	102310655	102310705	False	NM_032959,NM_001166339	chr7,chr7	-,+	POLR2J2,SPDYE2L	1527,-19934
chr13:30866026-30867531	chr13	+	30866273	30867530	True	NM_005800,NM_001014380	chr13,chr13	+,-	USPL1,KATNAL1	324299,13683
chr22:41345056-41345536	chr22	+	41345173	41345575	True	NM_014248,NM_145174	chr22,chr22	+,-	RBX1,DNAJB7	1775,-87043
chrX:31089583-31089938	chrX	+	31089624	31089986	True	NM_203391,NM_031894	chrX,chrX	+,-	GK,FTHL17	-418199,234
chr10:99531233-99531511	chr10	+	99531240	99531526	True	NM_003015,NM_001002261	chr10,chr10	-,+	SFRP5,ZFYVE27	280,-33057
chr3:33838306-33839852	chr3	+	33838603	33839706	True	NM_001162429,NR_027868,NM_013374,NM_015097	chr3,chr3,chr3,chr3	+,+,+,-	PDCD6IP,PDCD6IP,PDCD6IP,CLASP2	359,359,359,-78755
chr22:50967824-50968026	chr22	+	50967920	50968034	True	NM_005138,NM_001953,NM_001169111,NM_001169110,NM_001113756,NM_001169109,NM_001113755,NM_001014440,NM_138433	chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,-,-,-,-,+	SCO2,TYMP,SCO2,SCO2,TYMP,SCO2,TYMP,ODF3B,KLHDC7B	-3886,530,-3887,-3346,274,-3052,530,3024,18427
chr2:113541203-113542856	chr2	+	113541224	113542522	True	NM_000575,NM_014439	chr2,chr2	-,+	IL1A,IL1F7	499,128025
chr3:195159719-195160514	chr3	+	195159801	195160348	True	NM_012287,NR_003265	chr3,chr3	-,+	ACAP2,SDHAP2	3521,224561
chr9:107509929-107510136	chr9	+	107509966	107510124	True	NM_015469,NM_001001956	chr9,chr9	+,-	NIPSNAP3A,OR13C9	-48,-129481
chr19:8643968-8645399	chr19	+	8644033	8645182	True	NM_012335,NM_031203	chr19,chr19	-,+	MYO1F,HNRNPM	-1702,-134281
chr6:43022822-43023659	chr6	+	43023109	43023591	True	NM_015950,NM_001168370,NM_014780,NM_201521,NM_201523,NM_201522,NM_138343	chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,+,+,+,+	MRPL2,CUL7,CUL7,KLC4,KLC4,KLC4,KLC4	3701,-1426,-1426,3780,4037,4590,3780
chr1:2324471-2324985	chr1	+	2324529	2324704	True	NM_024848,NM_007033	chr1,chr1	-,+	MORN1,RER1	-1536,-1366
chr15:48938764-48940635	chr15	+	48938859	48940629	True	NM_014335,NM_000138	chr15,chr15	+,-	EID1,FBN1	229660,-874
chr13:27999124-28000015	chr13	+	27999216	27999936	True	NM_002097,NM_001166262	chr13,chr13	+,-	GTF3A,MTIF3	-586,24440
chr4:6643727-6644619	chr4	+	6643872	6644591	True	NM_033296,NM_203462	chr4,chr4	+,-	MRFAP1,MRFAP1L1	-1478,67065
chr16:31715086-31715510	chr16	+	31715339	31715469	True	NR_027011,NR_024034,NM_001130913	chr16,chr16,chr16	-,+,+	CSDAP1,KIAA0664L3,ZNF720	-134494,-3456,9080
chr8:21947654-21948422	chr8	+	21947676	21948470	True	NM_024815,NM_022749	chr8,chr8	-,+	NUDT18,FAM160B2	18512,-1015
chr20:57266640-57267028	chr20	+	57266682	57266899	True	NR_029844,NM_024663,NM_001204873,NM_001204872	chr20,chr20,chr20,chr20	-,+,+,+	MIR296,NPEPL1,NPEPL1,NPEPL1	125900,962,-2546,-2546
chr2:215319619-215321182	chr2	+	215319642	215321213	True	NM_000465,NM_001080500	chr2,chr2	-,+	BARD1,VWC2L	353272,-43238
chr3:182689283-182690684	chr3	+	182689574	182690529	True	NM_014616,NM_020640	chr3,chr3	+,-	ATP11B,DCUN1D1	-178334,7847
chr19:1862273-1862513	chr19	+	1862292	1862354	True	NR_034114,NM_031918	chr19,chr19	+,-	LOC100288123,KLF16	-40255,1260
chr11:115372583-115372910	chr11	+	115372698	115372938	True	NM_001098517,NM_182495,NM_014333	chr11,chr11,chr11	-,+,-	CADM1,FAM55B,CADM1	2353,-823562,2353
chr12:8390263-8391229	chr12	+	8390376	8390828	True	NR_024254,NR_026788	chr12,chr12	-,+	LOC653113,FAM66C	4764,-57622
chr1:36273246-36273523	chr1	+	36273298	36273478	True	NM_017629,NM_022111	chr1,chr1	+,-	EIF2C4,CLSPN	349,-37747
chr22:38902259-38902586	chr22	+	38902324	38902604	True	NM_006855,NM_001098504,NM_006386	chr22,chr22,chr22	+,-,-	KDELR3,DDX17,DDX17	-38292,7,7
chr16:56624212-56625229	chr16	+	56624420	56625026	True	NM_005954,NM_031885	chr16,chr16	+,-	MT3,BBS2	-1204,-70412
chr16:74734254-74734533	chr16	+	74734368	74734568	True	NM_152649,NM_032268,NM_001142497	chr16,chr16,chr16	-,+,-	MLKL,ZNRF1,MLKL	271,298346,271
chr20:62106227-62106785	chr20	+	62106251	62106711	True	NM_172106,NM_172107,NM_024299,NM_172108,NM_172109,NM_004518	chr20,chr20,chr20,chr20,chr20,chr20	-,-,+,-,-,-	KCNQ2,KCNQ2,PPDPF,KCNQ2,KCNQ2,KCNQ2	-2258,-2258,45421,-2258,-2258,-2258
chr7:151575075-151575524	chr7	+	151575279	151575571	True	NM_145292,NM_016203	chr7,chr7	+,-	GALNTL5,PRKAG2	77892,-963
chr8:39797776-39798799	chr8	+	39797845	39798354	True	NM_194294,NM_001464	chr8,chr8	+,-	IDO2,ADAM2	-5425,-102066
chr3:37476576-37477087	chr3	+	37476628	37477090	True	NM_002207,NM_017724	chr3,chr3	+,-	ITGA9,LRRFIP2	16722,-258777
chr19:58460567-58460918	chr19	+	58460632	58460956	True	NR_036508,NM_005773	chr19,chr19	+,-	LOC100128398,ZNF256	53305,-1555
chr11:46940664-46941904	chr11	+	46940779	46941808	True	NM_001003676,NM_002334	chr11,chr11	+,-	C11orf49,LRP4	16442,-606
chr2:74419795-74420885	chr2	+	74420155	74420463	True	NR_027405,NM_018221,NM_006636	chr2,chr2,chr2	+,-,+	MTHFD2,MOBKL1B,MTHFD2	5226,-14160,5226
chr11:62556312-62557440	chr11	+	62556399	62557395	True	NM_199337,NM_001080501	chr11,chr11	+,-	TMEM179B,TMEM223	-1578,2141
chr18:9882135-9882678	chr18	+	9882241	9882699	True	NM_005134,NM_001098529,NM_032243	chr18,chr18,chr18	-,+,+	PPP4R1,TXNDC2,TXNDC2	-267641,3023,3023
chr10:75546037-75546251	chr10	+	75546134	75546267	True	NM_015037,NM_003635,NM_203298	chr10,chr10,chr10	+,-,+	KIAA0913,NDST2,CHCHD1	-581,25373,-4378
chr4:124318217-124318624	chr4	+	124318295	124318639	True	NM_198041,NM_199327,NM_005841	chr4,chr4,chr4	-,+,+	NUDT6,SPRY1,SPRY1	-474172,-391,2043
chr22:21357830-21358117	chr22	+	21357961	21358149	True	NR_027051,NM_030573,NR_027052,NM_001008695	chr22,chr22,chr22,chr22	+,-,+,-	FLJ39582,THAP7,FLJ39582,THAP7	-1809,-1557,-1809,-1557
chr4:156868831-156869946	chr4	+	156868856	156869964	True	NM_005651,NM_001334	chr4,chr4	+,-	TDO2,CTSO	-44061,5134
chr1:247169767-247170527	chr1	+	247170158	247170403	True	NR_015422,NM_001204221,NR_037892,NM_020394	chr1,chr1,chr1,chr1	+,-,-,-	LOC149134,ZNF695,ZNF695,ZNF695	-217290,1043,1043,1043
chr16:53747022-53748470	chr16	+	53747455	53748514	True	NM_001080432,NM_015272,NM_001127897	chr16,chr16,chr16	+,-,-	FTO,RPGRIP1L,RPGRIP1L	-9631,-9684,-9684
chr9:32999880-33000546	chr9	+	32999978	33000319	True	NM_001195254,NR_036577,NM_001195252,NM_001195251,NM_001195250,NR_036579,NR_036578,NM_001195248,NM_001195249,NM_175069,NM_001539,NM_175073,NR_036576	chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,-,-,-,-,-,-,-,-,-,+,-,-	APTX,APTX,APTX,APTX,APTX,APTX,APTX,APTX,APTX,APTX,DNAJA1,APTX,APTX	1342,1371,1371,1371,1371,1306,1342,1371,1306,1371,24889,1371,1371
chr8:67403774-67404669	chr8	+	67403825	67404720	True	NM_001080416,NM_152765	chr8,chr8	-,+	MYBL1,C8orf46	120823,770
chr4:49289139-49289550	chr4	+	49289537	49289599	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-301323,-380722
chr11:9402036-9403115	chr11	+	9402177	9403012	True	NM_006391,NM_001165030	chr11,chr11	+,-	IPO7,TMEM41B	3156,-65881
chr11:11633017-11633258	chr11	+	11633058	11633306	True	NM_198516,NM_017944	chr11,chr11	-,+	GALNTL4,USP47	10305,229663
chr7:95941679-95943059	chr7	+	95941751	95942477	True	NR_027662,NM_004411,NM_014251,NM_001160210	chr7,chr7,chr7,chr7	-,+,-,-	SLC25A13,DYNC1I1,SLC25A13,SLC25A13	9032,-539992,9032,9032
chr14:41109768-41110485	chr14	+	41109966	41110419	True	NM_152447,NM_203301	chr14,chr14	+,-	LRFN5,FBXO33	966344,-1208262
chr17:16319569-16320046	chr17	+	16319661	16320061	True	NM_016113,NM_181716	chr17,chr17	+,-	TRPV2,CENPV	-856,-62849
chr11:61448965-61449174	chr11	+	61448964	61449088	True	NR_026882,NM_006133	chr11,chr11	-,+	DKFZP434K028,DAGLA	76098,-1110
chr12:6983045-6983748	chr12	+	6983134	6983251	True	NR_027483,NR_002803,NM_001146316,NM_001159287,NM_032641,NM_000365	chr12,chr12,chr12,chr12,chr12,chr12	+,+,-,+,-,+	TPI1,RPL13P5,SPSB2,TPI1,SPSB2,TPI1	-5907,9893,-685,-6601,-613,-6492
chr2:28113113-28113519	chr2	+	28113293	28113461	True	NM_004899,NM_199191,NM_199192,NM_199193,NM_199194,NM_022128,NR_028308	chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,+,-,-	BRE,BRE,BRE,BRE,BRE,RBKS,LOC100302650	95,95,95,20,20,-70,570
chr9:26996928-26998846	chr9	+	26997738	26998706	True	NM_025103,NM_022901	chr9,chr9	+,-	IFT74,LRRC19	-41431,7043
chr8:8560500-8560810	chr8	+	8560532	8560804	True	NM_004225,NM_194284	chr8,chr8	-,+	MFHAS1,CLDN23	190377,-917
chr12:70093075-70094095	chr12	+	70093175	70093986	True	NM_032735,NM_022456	chr12,chr12	-,+	BEST3,RAB3IP	1,38644
chr17:40990609-40991782	chr17	+	40990726	40991706	True	NM_176863,NM_001158,NM_009590,NM_005789,NM_003766	chr17,chr17,chr17,chr17,chr17	+,+,+,+,-	PSME3,AOC2,AOC2,PSME3,BECN1	-5354,4902,4902,-5354,-14416
chr19:34859119-34859519	chr19	+	34859118	34859560	True	NR_027620,NM_001184722,NM_000175	chr19,chr19,chr19	-,+,+	LOC643719,GPI,GPI	209086,-3526,-3139
chr22:21022190-21022491	chr19	+	1877410	1877545	False	NM_079834,NM_001130111,NM_031213	chr19,chr19,chr19	+,-,-	SCAMP4,FAM108A1,FAM108A1	27827,8108,8108
chr22:21022190-21022491	chr22	+	21022265	21022367	True	NM_002650,NR_024592	chr22,chr22	-,+	PI4KA,POM121L4P	66638,21475
chr22:21022190-21022491	chr22	+	22469435	22469497	False	NM_007128,NM_003935	chr22,chr22	+,-	VPREB1,TOP3B	129702,-132288
chr22:21022190-21022491	chr1	+	214779216	214779281	False	NM_016343,NM_005401	chr1,chr1	+,-	CENPF,PTPN14	-2735,-54192
chr22:21022190-21022491	chr1	-	146079744	146079809	False	NM_001097616,NM_183372	chr1,chr1	+,-	GPR89C,NBPF11	-195930,2874
chr22:21022190-21022491	chr1	-	147621580	147621645	False	NM_001097616,NM_183372	chr1,chr1	+,-	GPR89C,NBPF11	-196067,2874
chr14:81862214-81862458	chr14	+	81862221	81862457	True	NM_033104,NM_000369	chr14,chr14	-,+	STON2,TSHR	2520,-440403
chr20:61194391-61194762	chr20	+	61194530	61194644	True	NR_033263,NR_029676	chr20,chr20	-,+	C20orf200,MIR133A2	-45762,-32462
chr12:104458984-104459509	chr12	+	104459102	104459551	True	NM_031302,NM_013320	chr12,chr12	-,+	GLT8D2,HCFC2	-15187,-917
chr22:50217164-50217610	chr22	+	50217243	50217559	True	NM_014838,NM_014577	chr22,chr22	+,-	ZBED4,BRD1	29937,943
chr14:50776000-50777779	chr14	+	50776298	50777510	True	NR_033761,NM_024884,NM_001003805,NM_001003803,NM_015684	chr14,chr14,chr14,chr14,chr14	+,-,+,+,+	ATP5S,L2HGDH,ATP5S,ATP5S,ATP5S	1536,1487,1536,1536,1536
chr2:74742811-74743144	chr2	+	74742818	74743004	True	NM_016170,NM_032673	chr2,chr2	+,-	TLX2,PCGF1	-1273,-7997
chr1:227916475-227917382	chr1	+	227916553	227917359	True	NR_024485,NR_024486,NM_053052,NM_001161465,NM_023007	chr1,chr1,chr1,chr1,chr1	+,+,+,-,-	LOC100130093,LOC100130093,SNAP47,JMJD4,JMJD4	-364,-364,5337,5803,5803
chr21:45623757-45624105	chr21	+	45623784	45624064	True	NM_198155,NM_015259	chr21,chr21	+,-	C21orf33,ICOSLG	-70341,36820
chr16:89285121-89286779	chr16	+	89285621	89286733	True	NR_037705,NM_001201407,NM_005187,NM_182531	chr16,chr16,chr16,chr16	+,+,-,+	ZNF778,ZNF778,CBFA2T3,ZNF778	-1563,-1563,-242117,-1563
chr13:33772272-33774006	chr13	+	33772387	33773902	True	NM_004795,NM_052851	chr13,chr13	+,-	KL,STARD13	-181873,6336
chr9:79058491-79059029	chr9	+	79058912	79059048	True	NM_001097634,NM_018339	chr9,chr9	+,-	GCNT1,RFK	-2384,-49468
chr11:113848439-113849386	chr11	+	113848590	113849225	True	NM_000869,NM_213621,NM_001161772,NM_020886	chr11,chr11,chr11,chr11	+,+,+,-	HTR3A,HTR3A,HTR3A,USP28	-2844,-2844,-419,-102334
chr20:30798229-30798538	chr20	+	30798263	30798493	True	NM_015352,NM_172236,NM_002657	chr20,chr20,chr20	+,+,-	POFUT1,POFUT1,PLAGL2	-2618,-2618,-2717
chrX:48979047-48979371	chrX	+	48979055	48979410	True	NM_001099681,NM_015698	chrX,chrX	+,-	MAGIX,GPKOW	39770,720
chr2:96011589-96011913	chr2	+	96011594	96011886	True	NM_001164464,NM_001034914	chr2,chr2	-,+	TRIM43B,KCNIP3	138643,881
chr6:52925684-52926357	chr6	+	52925717	52926277	True	NM_012347,NM_014920,NM_033481,NM_033480,NM_016513	chr6,chr6,chr6,chr6,chr6	+,-,+,+,-	FBXO9,ICK,FBXO9,FBXO9,ICK	9493,373,3518,3979,373
chr1:1266275-1266495	chr1	+	1266323	1266543	True	NM_152228,NM_017871,NM_001029885	chr1,chr1,chr1	+,-,+	TAS1R3,CPSF3L,GLTPD1	182,-6277,-6231
chr21:14981472-14982361	chr21	+	14982086	14982154	True	NR_036164,NM_174981	chr21,chr21	-,+	MIR3156-3,POTED	-203305,343
chr10:6371481-6372249	chr10	+	6371488	6372220	True	NM_004566,NM_006257	chr10,chr10	+,-	PFKFB3,PRKCQ	-126699,250069
chr19:37408385-37409007	chr19	+	37408464	37408542	True	NM_001037232,NM_001171979,NM_001204838,NM_001204839,NM_198539,NM_001204835,NM_001204836,NM_001204837	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,+,+,+,+,+,+	ZNF829,ZNF829,ZNF568,ZNF568,ZNF568,ZNF568,ZNF568,ZNF568	-1271,-1541,-1297,-1297,-1297,-1297,-1297,-1297
chr22:38141164-38141812	chr22	+	38141255	38141786	True	NM_138797,NM_138632,NM_007032	chr22,chr22,chr22	-,+,+	ANKRD54,TRIOBP,TRIOBP	98617,454,454
chr1:151137894-151138116	chr1	+	151137902	151138065	True	NM_024575,NM_001204848,NR_037937,NM_001204856,NM_001136543,NM_024041,NM_212551	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,-,+,-	TNFAIP8L2,TNFAIP8L2-SCNM1,SCNM1,SCNM1,LYSMD1,SCNM1,LYSMD1	-8848,-8848,432,432,416,432,362
chr3:125497056-125498675	chr3	+	125497407	125498268	True	NR_024250,NR_031687	chr3,chr3	+,-	LOC100125556,MIR548I1	137175,11177
chr7:128696227-128697600	chr7	+	128696230	128697429	True	NM_001191028,NM_012470,NR_002187,NR_034053	chr7,chr7,chr7,chr7	-,-,+,-	TNPO3,TNPO3,TPI1P2,TNPO3	-1003,-1003,-1004,-1003
chr6:52864133-52865733	chr6	+	52864180	52865351	True	NM_001512,NM_033481	chr6,chr6	-,+	GSTA4,FBXO9	-4002,64444
chr6:99964112-99966028	chr6	+	99964112	99965819	True	NM_001080481,NM_001195131	chr6,chr6	-,+	USP45,LOC100130890	-860,3050
chr19:18112515-18112757	chr19	+	18112737	18112805	True	NM_001025604,NM_015683,NM_005535	chr19,chr19,chr19	+,+,-	ARRDC2,ARRDC2,IL12RB1	-844,6171,84942
chr18:32418783-32419075	chr18	+	32418795	32419095	True	NM_001112734,NM_032980	chr18,chr18	-,+	ZSCAN30,DTNA	451151,-20544
chr11:18720773-18721628	chr11	+	18720847	18721647	True	NM_153347,NM_173588	chr11,chr11	+,-	TMEM86A,IGSF22	-547,26180
chr13:28366106-28366548	chr13	+	28366275	28366597	True	NM_153371,NM_145657	chr13,chr13	-,+	LNX2,GSX1	-171555,182
chr3:57309402-57309815	chr3	+	57309542	57309814	True	NM_012096,NM_130387	chr3,chr3	+,-	APPL1,ASB14	-47828,3216
chr19:849987-850605	chr19	+	849986	850396	True	NM_001972,NM_001928,NM_002777,NM_024888	chr19,chr19,chr19,chr19	+,+,+,-	ELANE,CFD,PRTN3,LPPR3	1894,9268,-9057,-28034
chr12:56504066-56505616	chr12	+	56504294	56505357	True	NM_032786,NM_001035267,NM_001130420,NM_006191,NM_021104	chr12,chr12,chr12,chr12,chr12	+,+,-,+,+	ZC3H10,RPL41,SMARCC2,PA2G4,RPL41	6672,5016,78044,-6249,5016
chr6:52698354-52699709	chr6	+	52698509	52699520	True	NM_014051,NM_153699	chr6,chr6	+,-	TMEM14A,GSTA5	-162676,11423
chr17:72576489-72577098	chr17	+	72576488	72577125	True	NM_152460,NM_001115152	chr17,chr17	+,-	C17orf77,CD300LD	3931,11295
chr2:233405398-233405935	chr2	+	233405477	233405886	True	NM_005199,NM_004846,NM_145702	chr2,chr2,chr2	+,+,-	CHRNG,EIF4E2,TIGD1	-1091,9470,9391
chr17:9860719-9861067	chr17	+	9860779	9860843	True	NM_003644,NM_004246	chr17,chr17	-,+	GAS7,GLP2R	1973,-131449
chr15:100351538-100351912	chr15	+	100351581	100351954	True	NR_003260,NM_001130928	chr15,chr15	-,+	DNM1P46,MEF2A	-4449,-178462
chr14:67708367-67708615	chr14	+	67708444	67708664	True	NM_022474,NM_015994	chr14,chr14	+,-	MPP5,ATP6V1D	-474,118106
chr11:64005830-64007811	chr11	+	64006113	64007639	True	NM_057092,NM_138689,NM_005528,NM_003377,NM_004470,NM_001135208	chr11,chr11,chr11,chr11,chr11,chr11	+,-,+,+,+,+	FKBP2,PPP1R14B,DNAJC4,VEGFB,FKBP2,FKBP2	1948,6825,-8411,-3898,773,964
chr7:79764992-79766767	chr7	+	79764996	79766220	True	NM_001102386,NM_002069	chr7,chr7	-,+	GNAT3,GNAI1	375073,-907
chr12:85526462-85527972	chr12	+	85526632	85527984	True	NM_001100917,NM_001079910	chr12,chr12	-,+	TSPAN19,LRRIQ1	-96577,-96584
chr4:109571500-109571760	chr4	+	109571510	109571746	True	NR_026968,NM_021227	chr4,chr4	-,+	LOC285456,OSTC	-29897,-6
chr11:20048121-20048851	chr11	+	20048197	20048835	True	NM_001111019,NM_001029865	chr11,chr11	+,-	NAV2,DBX1	-3620,133085
chr22:21370800-21372213	chr22	+	21370916	21372088	True	NM_001159554,NR_003608,NM_005446	chr22,chr22,chr22	+,-,+	P2RX6,MGC16703,P2RX6	-1525,-2340,-1503
chr2:23654687-23655971	chr2	+	23654895	23655945	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	494039,-46655
chr12:120741200-120741651	chr12	+	120741360	120741652	True	NM_000928,NM_012240	chr12,chr12	-,+	PLA2G1B,SIRT4	23990,-1287
chrX:23764864-23766272	chrX	+	23764863	23766276	True	NM_001037171,NM_002970,NM_001033583	chrX,chrX,chrX	-,+,-	ACOT9,SAT1,ACOT9	-3456,34998,-3456
chrX:135733170-135734586	chrX	+	135733196	135734604	True	NM_004840,NM_000074	chrX,chrX	-,+	ARHGEF6,CD40LG	128949,-2911
chr2:62116740-62117445	chr2	+	62116804	62117303	True	NM_006430,NM_152516	chr2,chr2	-,+	CCT4,COMMD1	-1013,15499
chr14:31344306-31344592	chr14	+	31344391	31344583	True	NM_004086,NM_001135058,NR_030354	chr14,chr14,chr14	+,+,-	COCH,COCH,MIR624	-701,-701,139415
chr11:74657887-74658861	chr11	+	74658085	74658748	True	NM_014752,NM_182969	chr11,chr11	+,-	SPCS2,XRRA1	1543,1535
chr17:79354136-79354453	chr17	+	79354149	79354443	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	19096,-49675
chr3:55691642-55692299	chr3	+	55691935	55692305	True	NR_024615,NM_001012506	chr3,chr3	-,+	C3orf51,CCDC66	1242,898878
chr9:1048029-1049116	chr9	+	1048104	1049028	True	NM_006557,NM_001130865,NM_152569,NM_181872	chr9,chr9,chr9,chr9	+,+,-,+	DMRT2,DMRT2,C9orf66,DMRT2	1317,1325,-832211,1591
chr5:145718714-145718925	chr5	+	145718717	145718973	True	NM_020117,NM_002700	chr5,chr5	-,+	LARS,POU4F3	-156423,-181
chr3:52488850-52489163	chr3	+	52488866	52489190	True	NM_003280,NM_020163,NM_007184	chr3,chr3,chr3	-,-,+	TNNC1,SEMA3G,NISCH	-809,-9823,333
chr7:75730464-75732188	chr7	+	75730571	75731809	True	NM_005918,NM_016086	chr7,chr7	+,-	MDH2,STYXL1	-53229,-53250
chr18:23723844-23725173	chr18	+	23724250	23724720	True	NM_005637,NM_144662	chr18,chr18	-,+	SS18,PSMA8	-53639,-10498
chr5:70881988-70882436	chr5	+	70882167	70882409	True	NM_022132,NR_033968	chr5,chr5	+,-	MCCC2,LOC100049076	705,-327045
chr2:233319499-233320344	chr2	+	233319750	233320311	True	NM_001631,NM_004826	chr2,chr2	+,-	ALPI,ECEL1	521,32272
chr18:72125225-72125496	chr18	+	72125228	72125332	True	NM_001044369,NM_018235	chr18,chr18	-,+	FAM69C,CNDP2	-725,38167
chr3:139654296-139654539	chr3	+	139654372	139654526	True	NM_022131,NM_178177	chr3,chr3	+,-	CLSTN2,NMNAT3	-396,-257487
chrX:102834671-102835524	chrX	+	102834687	102835136	True	NM_001006935,NM_001006937,NM_080879,NM_024863	chrX,chrX,chrX,chrX	+,+,-,+	TCEAL4,TCEAL4,RAB40A,TCEAL4	5282,5282,-60270,5282
chr10:120939280-120939554	chr10	+	120939279	120939362	True	NM_005308,NM_014098,NM_006793	chr10,chr10,chr10	+,-,-	GRK5,PRDX3,PRDX3	27834,-934,-934
chr9:135756368-135757309	chr9	+	135756506	135757358	True	NM_152572,NM_018956	chr9,chr9	-,+	AK8,C9orf9	-2308,-2274
chr4:187158091-187158343	chr4	+	187158094	187158219	True	NR_033900,NM_000892	chr4,chr4	-,+	LOC285441,KLKB1	264044,-9475
chr5:141026932-141028824	chr5	+	141027136	141028586	True	NM_033449,NM_173828	chr5,chr5	-,+	FCHSD1,RELL2	2450,-10670
chr1:9888186-9888934	chr1	+	9888187	9888311	True	NM_022787,NM_001009566,NM_014944	chr1,chr1,chr1	+,-,-	NMNAT1,CLSTN1,CLSTN1	115174,-3637,-3637
chr7:119915570-119915881	chr7	+	119915574	119915882	True	NM_012281,NM_012338	chr7,chr7	+,-	KCND2,TSPAN12	-1903,582345
chr19:56895697-56897381	chr19	+	56895778	56897269	True	NM_144690,NR_037161,NR_037160,NR_037159	chr19,chr19,chr19,chr19	-,+,+,+	ZNF582,LOC386758,LOC386758,LOC386758	7679,7775,7775,7775
chr3:194392199-194392686	chr3	+	194392204	194392728	True	NM_018385,NM_153690	chr3,chr3	-,+	LSG1,FAM43A	528,13893
chr17:76922333-76922644	chr17	+	76922394	76922496	True	NM_003255,NM_030968	chr17,chr17	-,+	TIMP2,C1QTNF1	-922,97754
chr8:37821644-37821984	chr8	+	37821661	37822023	True	NM_000025,NM_004095	chr8,chr8	-,+	ADRB3,EIF4EBP1	2211,65996
chr6:32558173-32558647	chr6	+	32558172	32558653	True	NM_002124,NM_002122	chr6,chr6	-,+	HLA-DRB1,HLA-DQA1	-610,46529
chr15:99549045-99549418	chr15	+	99549063	99549441	True	NM_001102612,NM_001167902,NM_015286	chr15,chr15,chr15	-,-,+	PGPEP1L,PGPEP1L,SYNM	-178,1633,95844
chr17:79857804-79858333	chr17	+	79857845	79858255	True	NM_016476,NM_005782,NM_001002249,NM_001002248,NM_001002247,NM_001002246,NM_001002245,NM_001002244,NM_148896	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,-,+,+,+,+,+,+,+	ANAPC11,THOC4,ANAPC11,ANAPC11,ANAPC11,ANAPC11,ANAPC11,ANAPC11,NPB	-8297,-8383,-8078,-8297,-8297,-8297,-8297,-8297,1816
chr19:2476107-2476408	chr19	+	2476118	2476388	True	NM_032737,NM_015675	chr19,chr19	-,+	LMNB2,GADD45B	-19160,-46
chr2:230565491-230567353	chr2	+	230565792	230567332	True	NM_174899,NM_139072	chr2,chr2	+,-	FBXO36,DNER	219874,12004
chr17:3499207-3499857	chr17	+	3499316	3499736	True	NM_080705,NM_080706,NM_018727,NM_001031681	chr17,chr17,chr17,chr17	-,-,-,+	TRPV1,TRPV1,TRPV1,CTNS	-191,-3145,650,40025
chr17:43135572-43136177	chr17	+	43136125	43136193	True	NM_021079,NM_001128631,NM_024819	chr17,chr17,chr17	+,-,-	NMT1,DCAKD,DCAKD	2486,-7147,2330
chr10:6777109-6777650	chr10	+	6777322	6777650	True	NR_036503,NM_006257	chr10,chr10	+,-	LOC439949,PRKCQ	-154999,-155084
chr1:211850891-211852168	chr1	+	211851222	211851746	True	NR_026761,NM_002497,NM_001204182,NM_001204183	chr1,chr1,chr1,chr1	+,-,-,-	C1orf97,NEK2,NEK2,NEK2	-295176,-2250,-2250,-2250
chr10:8900597-8902370	chr10	+	8900946	8902404	True	NM_002051,NR_024256	chr10,chr10	+,-	GATA3,FLJ45983	-804343,-805499
chr16:31102682-31103062	chr16	+	31102701	31102938	True	NM_001122957,NM_024006,NM_001039503,NM_206824	chr16,chr16,chr16,chr16	+,-,-,-	BCKDK,VKORC1,PRSS53,VKORC1	16723,3393,-2571,3393
chr5:174904276-174904683	chr5	+	174904363	174904681	True	NM_000794,NM_022754	chr5,chr5	-,+	DRD1,SFXN1	-33200,832
chr2:159150251-159151141	chr2	+	159150252	159151081	True	NM_001005476,NM_138803	chr2,chr2	+,-	PKP4,CCDC148	162394,162240
chr17:7451305-7451799	chr17	+	7451784	7451848	True	NM_172087,NM_003808,NM_003809,NM_172089,NM_172088,NM_006942,NM_001198624,NM_001198623,NM_001198622,NR_037146	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,-,+,+,+,+	TNFSF13,TNFSF13,TNFSF12,TNFSF12-TNFSF13,TNFSF13,SOX15,TNFSF13,TNFSF13,TNFSF13,TNFSF12	9760,9760,526,526,9760,41690,9760,9760,9760,526
chr15:83419304-83419965	chr15	+	83419507	83419959	True	NR_036446,NR_003011	chr15,chr15	-,+	LOC283693,SCARNA15	-10975,4737
chr9:1050757-1051291	chr9	+	1050813	1051315	True	NM_181872,NM_001130865,NM_152569,NM_006557	chr9,chr9,chr9,chr9	+,+,-,+	DMRT2,DMRT2,C9orf66,DMRT2	-250,-516,-834920,-524
chr14:50580601-50582162	chr14	+	50580648	50581817	True	NM_024558,NM_001040662,NM_015684	chr14,chr14,chr14	-,-,+	METTL21D,METTL21D,ATP5S	1535,1535,197229
chr1:156123696-156124320	chr1	+	156123704	156124214	True	NM_001093725,NM_001193302,NM_001193301,NM_001193300,NM_022367	chr1,chr1,chr1,chr1,chr1	-,+,+,+,+	MEX3A,SEMA4A,SEMA4A,SEMA4A,SEMA4A	-71915,-386,-4020,-433,-433
chr7:73081022-73081250	chr7	+	73081026	73081126	True	NM_001077621,NM_032317	chr7,chr7	+,-	VPS37D,DNAJC30	1047,16719
chr10:24533787-24534039	chr10	+	24533792	24534001	True	NM_020824,NR_023388	chr10,chr10	-,+	ARHGAP21,PRINS	478647,2052
chr7:158801302-158802894	chr7	+	158801508	158802876	True	NM_003382	chr7	-	VIPR2	134823
chr14:32421354-32421563	chr14	+	32421356	32421570	True	NR_027263,NM_001030055	chr14,chr14	-,+	C14orf128,ARHGAP5	124385,124924
chr8:140714034-140714395	chr8	+	140714068	140714252	True	NM_016601,NM_017444	chr8,chr8	-,+	KCNK9,CHRAC1	1097,807148
chr15:43887627-43888594	chr15	+	43887634	43888516	True	NM_001190214,NM_001130858,NM_001130859,NM_020990	chr15,chr15,chr15,chr15	-,-,-,+	PPIP5K1,PPIP5K1,PPIP5K1,CKMT1B	-5183,-5183,-5183,-2434
chr15:43887627-43888594	chr15	+	43987466	43988348	False	NM_001015001,NM_172097	chr15,chr15	+,-	CKMT1A,CATSPER2	-2434,-46427
chr17:35303734-35304775	chr17	+	35303888	35304825	True	NM_012138,NM_198837,NM_005568	chr17,chr17,chr17	+,-,+	AATF,ACACA,LHX1	1349,351918,-9168
chr14:102786485-102787165	chr14	+	102786662	102787190	True	NM_014226,NM_018335	chr14,chr14	-,+	RAGE,ZNF839	-15131,-617
chr1:50887761-50888113	chr1	+	50887844	50888086	True	NM_021952,NM_032110	chr1,chr1	+,-	ELAVL4,DMRTA2	-313302,1105
chrX:49156848-49158274	chrX	+	49157305	49157884	True	NM_001098413,NM_014009	chrX,chrX	+,-	GAGE10,FOXP3	2240,-36017
chr10:119305093-119305338	chr10	+	119305169	119305365	True	NM_004098,NR_002791,NM_001165924	chr10,chr10,chr10	+,-,+	EMX2,EMX2OS,EMX2	-3264,-590,-3264
chr19:49957262-49958754	chr19	+	49957631	49957993	True	NM_153329,NM_001145396,NM_017916	chr19,chr19,chr19	+,+,-	ALDH16A1,ALDH16A1,PIH1D1	-1209,-1209,-2516
chr6:105585479-105586107	chr6	+	105585647	105586143	True	NM_007073,NR_037157,NM_001199563,NM_147147	chr6,chr6,chr6,chr6	-,+,-,-	BVES,C6orf112,BVES,BVES	-1104,-136,-598,-1426
chr19:18497908-18499107	chr19	+	18497914	18499074	True	NM_145256,NM_004864,NR_036156	chr19,chr19,chr19	-,+,+	LRRC25,GDF15,MIR3189	9391,-997,-593
chr9:124062503-124062858	chr9	+	124062520	124062878	True	NM_004099,NM_000177	chr9,chr9	-,+	STOM,GSN	69717,-492
chrX:106452821-106453950	chrX	+	106453141	106453610	True	NM_001169154,NM_017681,NM_173494,NR_033676	chrX,chrX,chrX,chrX	+,-,+,-	CXorf41,NUP62CL,CXorf41,NUP62CL	-3337,-3471,-3337,-3471
chr6:32795625-32796964	chr6_qbl_hap6	+	4027735	4028170	False	NM_018833,NR_037173	chr6_qbl_hap6,chr6_qbl_hap6	-,+	TAP2,LOC100507463	10542,15799
chr6:32795625-32796964	chr6_mcf_hap5	+	4132517	4132952	False	NM_018833,NM_002120,NR_037173	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	-,-,+	TAP2,HLA-DOB,LOC100507463	10527,-10791,15787
chr6:32795625-32796964	chr6_mann_hap4	+	4252824	4253259	False	NM_018833,NR_037173	chr6_mann_hap4,chr6_mann_hap4	-,+	TAP2,LOC100507463	10542,15799
chr6:32795625-32796964	chr6	+	32795629	32796064	True	NM_018833,NM_002120,NR_037173	chr6,chr6,chr6	-,-,+	TAP2,HLA-DOB,LOC100507463	10540,-10804,15798
chr6:32795625-32796964	chr6_cox_hap2	+	4240158	4240593	False	NM_018833,NM_002120,NR_037173	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	-,-,+	TAP2,HLA-DOB,LOC100507463	10539,-10803,15797
chr13:107077046-107078398	chr13	+	107077368	107078304	True	NM_004093,NR_034119	chr13,chr13	-,+	EFNB2,LOC728192	109134,-48508
chr17:26850358-26850644	chr17	+	26850377	26850625	True	NM_005148,NM_003593	chr17,chr17	-,+	UNC119,FOXN1	29071,333
chr18:21602903-21604164	chr18	+	21602945	21603690	True	NM_001135993,NR_024232,NM_018030	chr18,chr18,chr18	+,+,-	TTC39C,TTC39C,OSBPL1A	-8612,-8612,248557
chr2:86428082-86430056	chr2	+	86428148	86429793	True	NM_006839,NM_016622,NM_001100170,NM_145644,NM_001100169	chr2,chr2,chr2,chr2,chr2	-,+,-,+,-	IMMT,MRPL35,IMMT,MRPL35,IMMT	-5255,-1643,-5255,-1643,-5255
chr20:30310003-30310460	chr20	+	30310022	30310321	True	NM_012112,NM_138578,NM_001191	chr20,chr20,chr20	+,-,-	TPX2,BCL2L1,BCL2L1	16582,386,386
chr2:48948480-48949009	chr2	+	48948544	48948999	True	NM_000233,NM_006872	chr2,chr2	-,+	LHCGR,GTF2A1L	33938,-103666
chr1:207033796-207035392	chr1	+	207034019	207034910	True	NM_001193338,NM_018724	chr1,chr1	-,+	FAIM3,IL20	60376,4243
chr19:50274531-50275202	chr19	+	50274611	50275235	True	NM_021733,NM_130787,NM_014203	chr19,chr19,chr19	-,+,+	TSKS,AP2A1,AP2A1	-8096,-4493,-4493
chrX:154259119-154260342	chrX	+	154259402	154260227	True	NM_023934,NM_000132	chrX,chrX	+,-	FUNDC2,F8	-4400,-8404
chr3:129613893-129614176	chr3	+	129614110	129614174	True	NM_001128224,NR_037893	chr3,chr3	-,+	TMCC1,LOC100507032	-1691,-1456
chr17:74451227-74452017	chr17	+	74451560	74451825	True	NM_022066,NM_001166579	chr17,chr17	-,+	UBE2O,AANAT	-2272,-2185
chr9:94871573-94871974	chr9	+	94871657	94871843	True	NR_015444,NM_006415,NM_178324	chr9,chr9,chr9	+,-,-	LOC100128076,SPTLC1,SPTLC1	23272,5897,5897
chr9:94871573-94871974	chr9	-	85042390	85042472	False	NM_152573,NM_001001670	chr9,chr9	-,+	RASEF,FAM75D1	635628,-438754
chr9:27297598-27298551	chr9	+	27297601	27298585	True	NM_001161585,NM_020641,NM_000459	chr9,chr9,chr9	-,-,+	C9orf11,C9orf11,TEK	-464,-464,-188505
chr10:6020902-6022612	chr10	+	6021063	6022516	True	NM_032807,NR_033494,NM_002189,NM_172200	chr10,chr10,chr10,chr10	+,-,-,-	FBXO18,IL15RA,IL15RA,IL15RA	-84779,-921,-1489,-1489
chr19:42214136-42214670	chr19	+	42214239	42214555	True	NM_004363,NM_006890	chr19,chr19	+,-	CEACAM5,CEACAM7	-1760,-22143
chr3:49942094-49942618	chr3	+	49942099	49942461	True	NM_001167582,NM_002447	chr3,chr3	+,-	RBM6,MST1R	35015,-793
chr2:85838670-85838945	chr2	+	85838669	85838734	True	NR_033179,NM_006590,NM_001013649,NM_001031738	chr2,chr2,chr2,chr2	-,+,-,-	TMEM150A,USP39,C2orf68,TMEM150A	-8847,4548,496,-8847
chr1:85565372-85567265	chr1	+	85566868	85567100	True	NM_145172,NM_018298	chr1,chr1	+,-	WDR63,MCOLN3	-38938,-52699
chr16:67226398-67226935	chr16	+	67226407	67226977	True	NM_024712,NM_001950,NM_178516,NR_029887,NM_001040715	chr16,chr16,chr16,chr16,chr16	+,+,-,-,-	ELMO3,E2F4,EXOC3L1,MIR328,KIAA0895L	6050,-390,-2300,9371,-8524
chr21:46708727-46710137	chr21	+	46708772	46710056	True	NM_133635,NR_026943,NR_004858,NM_015227	chr21,chr21,chr21,chr21	-,+,-,-	POFUT2,LOC642852,POFUT2,POFUT2	-961,-858,-961,-961
chr2:113742029-113742521	chr2	+	113742039	113742471	True	NM_019618,NM_014438	chr2,chr2	+,-	IL1F9,IL1F8	-6484,68019
chr12:111283728-111284583	chr12	+	111283926	111284599	True	NM_152591,NM_000432	chr12,chr12	+,-	CCDC63,MYL2	211,73855
chr6:112576391-112577312	chr6	+	112576408	112577014	True	NM_001013734,NM_001105209,NM_001105208,NM_002290,NM_001105207,NM_001105206	chr6,chr6,chr6,chr6,chr6,chr6	+,-,-,-,-,-	RFPL4B,LAMA4,LAMA4,LAMA4,LAMA4,LAMA4	91517,-580,-580,-580,-580,-580
chr3:196755019-196755525	chr3	+	196755019	196755537	True	NR_024388,NM_005929,NM_033316	chr3,chr3,chr3	+,-,-	LOC152217,MFI2,MFI2	-85576,1200,1199
chr5:138533371-138533796	chr5	+	138533417	138533784	True	NM_001194954,NM_001037633,NM_022464	chr5,chr5,chr5	+,-,-	MATR3,SIL1,SIL1	75656,332,332
chr11:118765280-118765554	chr11	+	118765333	118765501	True	NM_182557,NM_032966	chr11,chr11	-,+	BCL9L,CXCR5	16162,-1283
chr7:154735337-154736074	chr7	+	154735825	154736039	True	NM_007349,NR_024476	chr7,chr7	-,+	PAXIP1,LOC100132707	58693,-15649
chr9:130660594-130660843	chr9	+	130660726	130660886	True	NM_001018078,NM_013443	chr9,chr9	+,-	FPGS,ST6GALNAC6	-95269,1035
chr17:30669278-30669674	chr17	+	30669330	30669642	True	NM_001098507,NM_001032293,NR_030362,NM_022344,NM_003457	chr17,chr17,chr17,chr17,chr17	+,+,+,-,+	ZNF207,ZNF207,MIR632,C17orf75,ZNF207	7514,7514,7485,-141,7514
chr2:86948277-86949764	chr2	+	86948432	86949741	True	NM_022780,NM_001198954	chr2,chr2	+,-	RMND5A,RNF103-VPS24	-1070,-187
chr2:86948277-86949764	chr2	-	87301379	87302541	False	NR_026846,NM_001024457	chr2,chr2	-,+	LOC285074,RGPD1	1046,-156692
chr15:91537032-91537330	chr15	+	91537192	91537274	True	NM_199413,NM_033544,NM_199414,NM_003981	chr15,chr15,chr15,chr15	-,+,-,-	PRC1,RCCD1,PRC1,PRC1	580,-39141,580,580
chr6:111927057-111927339	chr6	+	111927099	111927394	True	NM_001164281,NR_028338,NM_147686,NR_034109	chr6,chr6,chr6,chr6	-,-,-,+	TRAF3IP2,TRAF3IP2,TRAF3IP2,LOC643749	137,137,137,-122475
chr12:8210564-8212298	chr12	+	8211052	8212322	True	NM_004054,NM_015509	chr12,chr12	-,+	C3AR1,NECAP1	6683,22484
chr14:23479748-23480390	chr14	+	23479747	23479991	True	NM_001130706,NM_021944,NM_001130708,NM_001099780	chr14,chr14,chr14,chr14	-,-,-,+	C14orf93,C14orf93,C14orf93,PSMB11	-387,-387,-387,31384
chr14:52790738-52791249	chr14	+	52790839	52791249	True	NM_000956,NM_001160047	chr14,chr14	+,-	PTGER2,TXNDC16	-9875,228102
chr19:39735599-39735980	chr19	+	39735602	39735960	True	NM_172139,NM_172138	chr19,chr19	-,+	IL28B,IL28A	9,23196
chr19:39735599-39735980	chr19	-	39758965	39759237	False	NM_172139,NM_172138	chr19,chr19	-,+	IL28B,IL28A	-23354,45
chr6:4127807-4129438	chr6	+	4128001	4129252	True	NM_006117,NR_028588,NM_001085401,NM_206836,NM_001166010	chr6,chr6,chr6,chr6,chr6	-,-,+,-,-	ECI2,ECI2,C6orf201,ECI2,ECI2	6629,6629,-48619,6629,6500
chr11:65292992-65293777	chr11	+	65293060	65293690	True	NM_001048218,NM_001130144,NM_020680	chr11,chr11,chr11	+,-,+	SCYL1,LTBP3,SCYL1	-563,32059,-563
chr6:88182656-88182891	chr6	+	88182853	88182915	True	NM_006416,NM_020320,NM_001168398	chr6,chr6,chr6	+,-,+	SLC35A1,RARS2,SLC35A1	-261,116870,-261
chr5:76788124-76788352	chr5	+	76788163	76788383	True	NM_003719,NM_018268	chr5,chr5	+,-	PDE8B,WDR41	-281508,-1
chrX:47343017-47344227	chrX	+	47343159	47344005	True	NM_001654,NM_153380,NM_007130	chrX,chrX,chrX	+,-,-	ARAF,ZNF41,ZNF41	76510,-814,-814
chr12:49054218-49056046	chr12	+	49054222	49055547	True	NR_029448,NR_031623,NR_002950,NR_002951,NR_002968	chr12,chr12,chr12,chr12,chr12	+,-,-,-,-	LOC255411,MIR1291,SNORA2A,SNORA2B,SNORA34	65670,-5909,-3657,5880,-5921
chr8:124099169-124100142	chr8	+	124099368	124099986	True	NM_024295,NM_145647	chr8,chr8	-,+	DERL1,WDR67	-44720,-14499
chr19:56653985-56654228	chr19	+	56653984	56654228	True	NM_001002836,NM_018337	chr19,chr19	-,+	ZNF787,ZNF444	-21335,-1479
chr5:60670038-60670471	chr5	+	60670201	60670363	True	NM_001048249,NM_020928	chr5,chr5	-,+	C5orf43,ZSWIM6	-211899,-42159
chr3:2948495-2948976	chr3	+	2948570	2948921	True	NM_000564,NM_182916	chr3,chr3	-,+	IL5RA,TRNT1	203200,219678
chr19:51412465-51414343	chr19	+	51412529	51414381	True	NM_004917,NM_005551	chr19,chr19	-,+	KLK4,KLK2	-91,-35891
chr1:184938929-184940137	chr1	+	184938950	184939970	True	NM_052966,NM_007212	chr1,chr1	-,+	FAM129A,RNF2	3762,74580
chr10:112064679-112064884	chr10	+	112064696	112064908	True	NM_005962,NM_005871	chr10,chr10	+,-	MXI1,SMNDC1	-78985,-5
chr1:159915881-159917131	chr1	+	159915935	159916843	True	NM_001135050,NM_033438,NM_001146173,NM_020125,NM_001146172,NM_020789	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,-	IGSF9,SLAMF9,SLAMF9,SLAMF8,SLAMF9,IGSF9	-549,7251,7251,-119507,7251,-549
chr2:62131917-62132895	chr2	+	62131985	62132639	True	NM_006430,NM_152516	chr2,chr2	-,+	CCT4,COMMD1	-16194,163
chr5:140574156-140574406	chr5	+	140574155	140574455	True	NM_031947,NM_019119,NM_018930,NM_018931	chr5,chr5,chr5,chr5	-,+,+,+	SLC25A2,PCDHB9,PCDHB10,PCDHB11	109207,-7313,-2254,4892
chr5:140574156-140574406	chr5	+	140569045	140569095	False	NM_020957,NM_018930,NM_019119,NM_031947	chr5,chr5,chr5,chr5	+,+,+,-	PCDHB16,PCDHB10,PCDHB9,SLC25A2	-8116,2856,-2203,114567
chr10:119301796-119302009	chr10	+	119301938	119302052	True	NM_004098,NR_002791,NM_001165924	chr10,chr10,chr10	+,-,+	EMX2,EMX2OS,EMX2	-33,2577,-33
chr17:62659466-62659976	chr17	+	62659466	62659920	True	NM_022739,NM_138363	chr17,chr17	-,+	SMURF2,CCDC45	-1080,-156367
chr7:28726384-28726847	chr7	+	28726609	28726868	True	NM_014817,NM_001011666	chr7,chr7	-,+	TRIL,CREB5	271220,-948
chr10:64894773-64895697	chr10	+	64894984	64895749	True	NM_004241,NM_030759	chr10,chr10	-,+	JMJD1C,NRBF2	133288,-2036
chr22:23522458-23522673	chr22	+	23522481	23522551	True	NM_004327,NM_021574,NM_014433	chr22,chr22,chr22	+,+,-	BCR,BCR,RTDR1	0,0,-38240
chr19:12918988-12920945	chr19	+	12919110	12920760	True	NM_005809,NM_181738,NM_006397	chr19,chr19,chr19	-,-,+	PRDX2,PRDX2,RNASEH2A	-6416,-6416,-1733
chr2:33953334-33953587	chr2	+	33953439	33953502	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-214548,-155
chr21:48057017-48057788	chr21	+	48057026	48057661	True	NM_006272,NM_001535	chr21,chr21	-,+	S100B,PRMT2	-31991,-1550
chr3:123170832-123171491	chr3	+	123171151	123171498	True	NM_012430,NM_183357	chr3,chr3	+,-	SEC22A,ADCY5	-250436,-3759
chr1:48372719-48373308	chr1	+	48372773	48373353	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	89259,315003
chr3:150660874-150662366	chr3	+	150660905	150662345	True	NR_024066,NM_052995	chr3,chr3	+,-	CLRN1OS,CLRN1	28119,0
chr5:112200373-112201582	chr5	+	112200400	112201065	True	NM_001204199,NM_001204196,NM_001204194,NM_001204193,NM_005669,NM_003135	chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,-,+	SRP19,SRP19,SRP19,SRP19,REEP5,SRP19	-3567,-3567,-3567,-3567,57027,-3567
chr2:27601382-27601717	chr2	+	27601386	27601698	True	NM_001201459,NM_001034116,NM_014748,NM_015636,NM_144631,NM_172195	chr2,chr2,chr2,chr2,chr2,chr2	-,-,+,-,-,-	ZNF513,EIF2B4,SNX17,EIF2B4,ZNF513,EIF2B4	1663,-8062,-8048,-8062,1963,-8467
chr1:85632818-85633292	chr1	+	85633081	85633168	True	NM_145172,NM_032184	chr1,chr1	+,-	WDR63,SYDE2	-105150,33617
chr5:149884853-149885432	chr5	+	149884854	149885306	True	NM_001025070,NM_001543	chr5,chr5	-,+	RPS14,NDST1	-55535,2367
chr7:39662183-39662745	chr7	+	39662247	39662745	True	NM_138701,NM_005402	chr7,chr7	-,+	C7orf11,RALA	511556,406
chr1:43289910-43291099	chr1	+	43290229	43291065	True	NM_018538,NM_199342,NM_001017922	chr1,chr1,chr1	+,-,+	ERMAP,CCDC23,ERMAP	183,-7170,-7506
chr1:32689692-32690362	chr1	+	32689721	32690259	True	NM_003757,NM_019118	chr1,chr1	+,-	EIF3I,TMEM234	-1801,-1795
chr8:22550449-22551028	chr8	+	22550505	22551077	True	NM_021174,NM_001199880,NM_004430,NM_001199881	chr8,chr8,chr8,chr8	+,-,-,-	KIAA1967,EGR3,EGR3,EGR3	-88017,-603,26,-412
chr19:58341172-58341631	chr19	+	58341259	58341572	True	NR_024162,NM_001204818	chr19,chr19	-,+	FKBP1AP1,LOC100293516	-2429,89
chr11:64544975-64545213	chr11	+	64544979	64545237	True	NM_001178030,NM_001178031,NM_004630,NR_033649,NM_006244,NM_201995,NM_201997,NM_201998,NR_033650	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,+,-,-,-,-	SF1,SF1,SF1,SF1,PPP2R5B,SF1,SF1,SF1,SF1	751,45,1129,1129,146905,1129,1129,1129,1129
chr4:88144200-88145394	chr4	+	88144411	88145442	True	NM_020803,NM_024047	chr4,chr4	-,+	KLHL8,NUDT9	-2737,198292
chr10:124132199-124133566	chr10	+	124132329	124133513	True	NM_001001974,NM_001010912	chr10,chr10	+,-	PLEKHA1,C10orf120	580,325877
chr16:89755412-89755670	chr16	+	89755519	89755717	True	NM_001098533,NM_001160367,NM_052987,NR_027702,NR_027703,NM_152339,NM_052988	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,-,+	CDK10,CDK10,CDK10,CDK10,CDK10,SPATA2L,CDK10	-2494,-2494,-2494,-2494,-2494,12454,-2494
chr19:1024363-1025439	chr19	+	1024894	1025395	True	NM_004368,NM_033420,NM_001033026,NM_201277	chr19,chr19,chr19,chr19	+,-,-,+	CNN2,C19orf6,C19orf6,CNN2	902,-3753,-3753,902
chrX:106869844-106871542	chrX	+	106869939	106871487	True	NM_002764,NM_001015881,NM_001204402	chrX,chrX,chrX	+,-,+	PRPS1,TSC22D3,PRPS1	166,88274,166
chr1:16817529-16818488	chr1	+	16818046	16818492	True	NR_023386,NM_018090	chr1,chr1	-,+	CROCCP3,NECAP2	754,-50930
chr1:16817529-16818488	chr1	-	17247962	17248028	False	NM_014675,NM_001135248	chr1,chr1	+,-	CROCC,MFAP2	416,59211
chr19:8838150-8839402	chr19	+	8838255	8839248	True	NM_178525,NM_001004699	chr19,chr19	-,+	ACTL9,OR2Z1	-29083,2142
chr10:111678239-111679712	chr10	+	111678746	111679524	True	NM_020383,NM_019903,NR_030724,NM_001167604	chr10,chr10,chr10,chr10	-,+,-,-	XPNPEP1,ADD3,XPNPEP1,XPNPEP1	3837,86201,3837,3837
chr17:38335985-38337198	chr17	+	38336192	38336981	True	NM_016339,NM_021724	chr17,chr17	+,-	RAPGEFL1,NR1D1	-2001,-79219
chr4:47891526-47891928	chr4	+	47891537	47891947	True	NM_152995,NM_207330	chr4,chr4	-,+	NFXL1,NIPAL1	24750,126843
chr10:7451866-7452105	chr10	+	7451948	7452011	True	NM_002216,NM_001029880,NM_001018039	chr10,chr10,chr10	+,-,-	ITIH2,SFMBT2,SFMBT2	293224,1490,-645
chr2:118583160-118585085	chr2	+	118583254	118584832	True	NM_019044,NM_006773	chr2,chr2	-,+	CCDC93,DDX18	186957,-11057
chr11:19257722-19258745	chr11	+	19257805	19258663	True	NM_001111018,NM_024680	chr11,chr11	+,-	NAV2,E2F8	113607,3894
chr17:76625369-76625942	chr17	+	76625404	76625962	True	NM_173628,NM_024419	chr17,chr17	-,+	DNAH17,PGS1	-51928,-250727
chr12:6547723-6549278	chr12	+	6547735	6549013	True	NM_001242,NR_015382	chr12,chr12	+,-	CD27,LOC678655	5037,11720
chr19:49121446-49122292	chr19	+	49121486	49122212	True	NM_001204159,NM_001204158,NM_001204160,NM_000979,NM_017708,NM_020126	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,-,-,+	SPHK2,SPHK2,SPHK2,RPL18,FAM83E,SPHK2	578,335,5996,271,-4792,335
chr9:139743987-139744293	chr9	+	139743995	139744251	True	NM_003792,NM_206920,NM_014172,NM_001080482,NM_001135861	chr9,chr9,chr9,chr9,chr9	-,+,+,+,+	EDF1,MAMDC4,PHPT1,C9orf172,PHPT1	16537,2567,-790,-5179,-790
chrX:2748179-2748682	chrX	+	2748214	2748696	True	NM_001184703,NM_001184702,NM_001184704,NM_003918,NM_001079855,NM_001669	chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,-	GYG2,GYG2,GYG2,GYG2,GYG2,ARSD	-1402,-1402,-1402,-1402,-1402,98746
chr10:32343250-32344497	chr10	+	32343263	32344381	True	NM_004521,NM_001026383	chr10,chr10	-,+	KIF5B,CCDC7	1048,390659
chr17:21904745-21905270	chr17	+	21904799	21905291	True	NM_001113434,NR_027084	chr17,chr17	-,+	C17orf51,FLJ36000	-449858,-788
chr17:21904745-21905270	chr17	+	21902311	21902577	False	NM_001113434,NR_027084	chr17,chr17	-,+	C17orf51,FLJ36000	-447370,1484
chr17:21904745-21905270	chr17	+	21907173	21907665	False	NM_001113434,NR_027084	chr17,chr17	-,+	C17orf51,FLJ36000	-452232,-3162
chr7:26186620-26187324	chr7	+	26186621	26186971	True	NM_002137,NM_004289	chr7,chr7	-,+	HNRNPA2B1,NFE2L3	53492,4875
chr5:173413689-173414665	chr5	+	173414222	173414496	True	NM_138369,NM_001144954	chr5,chr5	-,+	BOD1,C5orf47	-370556,1665
chr19:57018134-57019043	chr19	+	57018167	57018716	True	NM_020813,NR_030740	chr19,chr19	+,-	ZNF471,ZNF667	495,-29397
chrX:70713022-70713552	chrX	+	70713169	70713467	True	NR_002226,NM_181672	chrX,chrX	-,+	INGX,OGT	-565,39444
chr5:34657269-34657743	chr5	+	34657369	34657649	True	NM_001145520,NR_026591,NM_001145522,NM_015577	chr5,chr5,chr5,chr5	+,-,+,+	RAI14,RAD1,RAI14,RAI14	-824,258132,-987,-987
chr21:44872731-44873107	chr21	+	44873024	44873148	True	NR_026960,NR_026863	chr21,chr21	+,-	C21orf125,C21orf84	-3171,25005
chr1:33283325-33283606	chr1	+	33283397	33283649	True	NM_003680,NM_001017406,NM_022753	chr1,chr1,chr1	-,+,+	YARS,S100PBP,S100PBP	34,-272,-272
chr1:46244037-46244987	chr1	+	46244290	46244892	True	NM_005897,NM_015112	chr1,chr1	-,+	IPP,MAST2	-27805,24392
chr21:42801135-42801689	chr21	+	42801171	42801609	True	NM_002462,NM_001135099,NM_001178046,NM_001144925	chr21,chr21,chr21,chr21	+,-,+,+	MX1,TMPRSS2,MX1,MX1	-3250,78433,-3125,-8708
chr6:138821572-138823237	chr6	+	138821620	138823215	True	NM_001144060,NM_014320	chr6,chr6	-,+	NHSL1,HEBP2	-1041,-96342
chr1:171711475-171711800	chr1	+	171711522	171711838	True	NM_001007239,NM_003762,NR_033704,NM_001185127	chr1,chr1,chr1,chr1	+,-,-,-	METTL13,VAMP4,VAMP4,VAMP4	38922,-143,-143,-143
chr1:39958072-39958295	chr1	+	39958072	39958296	True	NR_003929,NM_181809	chr1,chr1	-,+	PPIEL,BMP8A	67124,-805
chr1:39958072-39958295	chr1	-	40253658	40253708	False	NM_001720,NM_001195007	chr1,chr1	-,+	BMP8B,PPIE	875,-49192
chr8:120857484-120859092	chr8	+	120857611	120858793	True	NM_024094,NM_022783	chr8,chr8	-,+	DSCC1,DEPTOR	9440,27106
chr10:76997412-76997767	chr10	+	76997412	76997815	True	NM_144589,NR_033675	chr10,chr10	-,+	COMTD1,VDAC2	-1642,-27163
chr1:7911183-7911597	chr1	+	7911237	7911595	True	NM_006786,NM_021995,NM_016831	chr1,chr1,chr1	-,-,+	UTS2,UTS2,PER3	1559,2006,-66525
chr5:37833367-37834169	chr5	+	37833470	37834126	True	NM_152403,NM_000514,NM_001190469,NM_001190468,NM_199231	chr5,chr5,chr5,chr5,chr5	+,-,-,-,-	EGFLAM,GDNF,GDNF,GDNF,GDNF	424406,5707,1854,1854,1518
chr9:139846332-139846923	chr9	+	139846356	139846952	True	NM_000606,NM_018998,NM_178536	chr9,chr9,chr9	+,-,+	C8G,FBXW5,LCN12	-6709,-7183,33
chr5:10568920-10569827	chr5	+	10568946	10569794	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-4562,191650
chr5:68679500-68680330	chr5	+	68679553	68680163	True	NM_133339,NM_001015892	chr5,chr5	+,-	RAD17,TAF9	-12324,-13713
chr15:69854202-69854564	chr15	+	69854217	69854602	True	NR_026979,NR_030714	chr15,chr15	+,-	LOC145837,MIR629	-209,517256
chr18:51751170-51752216	chr18	+	51751425	51752217	True	NR_002970,NM_007195,NM_015832,NM_003927	chr18,chr18,chr18,chr18	-,+,-,-	SNORA37,POLI,MBD2,MBD2	-2643,43631,-267,-267
chr6:41607866-41608123	chr6	+	41607889	41608123	True	NM_005586,NM_007162	chr6,chr6	+,-	MDFI,TFEB	-1745,94725
chr4:16256971-16258161	chr4	+	16257091	16258157	True	NM_153365,NR_027697	chr4,chr4	-,+	TAPT1,FLJ39653	-28930,-28869
chr2:128646206-128647479	chr2	+	128646384	128647444	True	NM_032740,NM_031445,NM_001199140	chr2,chr2,chr2	+,-,-	SFT2D3,AMMECR1L,AMMECR1L	-187838,-3950,-2870
chr8:81397867-81398104	chr8	+	81397883	81398097	True	NM_005079,NM_023929,NM_001105539	chr8,chr8,chr8	-,+,+	TPD52,ZBTB10,ZBTB10	-314047,350,350
chr17:48911575-48911793	chr17	+	48911586	48911748	True	NM_005749,NM_175575	chr17,chr17	-,+	TOB1,WFIKKN2	29715,856
chr1:6480119-6480481	chr1	+	6480270	6480520	True	NM_019089,NR_036218,NM_031475	chr1,chr1,chr1	-,-,+	HES2,MIR4252,ESPN	-291,9486,4327
chr5:1345824-1346059	chr5	+	1345927	1346030	True	NM_182632,NM_030782	chr5,chr5	+,-	SLC6A18,CLPTM1L	-120508,-925
chr2:189861202-189861637	chr2	+	189861278	189861399	True	NR_036076,NR_037401	chr2,chr2	-,+	MIR3129,MIR3606	136497,-985
chr12:56116225-56116571	chr12	+	56116224	56116300	True	NM_001780,NR_037656,NR_037658,NM_001040034,NR_037655,NR_037657,NM_001487,NM_002905,NM_001199771	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,-,+,+,+,+,+	CD63,BLOC1S1,BLOC1S1-RDH5,CD63,BLOC1S1,BLOC1S1,BLOC1S1,RDH5,RDH5	6660,-6199,-6457,6660,-6457,-6199,-6457,-2124,-2124
chr17:27047399-27047668	chr17	+	27047478	27047716	True	NR_024575,NR_024579,NM_000984,NR_000014,NM_178170,NM_031934,NM_001142624,NR_000013,NR_000009,NR_000010,NM_138463,NM_001144942,NM_152465,NM_001160407,NM_001144943,NM_001142625	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,+,+,-,-,+,+,+,-,-,-,-,-,-	RAB34,RAB34,RPL23A,SNORD42A,NEK8,RAB34,RAB34,SNORD42B,SNORD4B,SNORD4A,TLCD1,RAB34,PROCA1,TLCD1,RAB34,RAB34	-2227,-2227,-537,2730,8115,-2570,-2192,1,2982,1883,5564,-2570,-8606,6283,-2192,-2192
chrX:48216251-48217202	chrX	+	48216339	48217119	True	NM_175711,NM_021014,NM_001034832	chrX,chrX,chrX	-,-,+	SSX3,SSX3,SSX4B	-197,-197,25848
chrX:134936178-134936384	chrX	+	134936178	134936424	True	NM_018666,NM_001017436	chrX,chrX	+,-	SAGE1,CT45A4	39360,361
chrX:134936178-134936384	chrX	+	134953437	134953683	False	NM_001007551,NM_018666,NM_001172288	chrX,chrX,chrX	-,+,-	CT45A5,SAGE1,CT45A5	361,22101,361
chrX:134936178-134936384	chrX	+	134970687	134970933	False	NM_001017438,NM_018666	chrX,chrX	-,+	CT45A6,SAGE1	361,4851
chrX:134936178-134936384	chrX	-	134866524	134866770	False	NM_152582,NM_001017436	chrX,chrX	+,+	CT45A2,CT45A4	-361,-361
chrX:134936178-134936384	chrX	-	134883798	134884044	False	NM_001017436,NM_001017435	chrX,chrX	-,+	CT45A4,CT45A3	52741,-361
chr4:169929711-169930427	chr4	+	169929734	169930375	True	NM_001166110,NM_032783	chr4,chr4	+,-	PALLD,CBR4	-176629,1151
chr10:18430314-18430688	chr10	+	18430502	18430706	True	NM_001167945,NM_201596,NM_201597,NM_201593,NM_201572,NM_201571,NM_182543	chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,+,-	CACNB2,CACNB2,CACNB2,CACNB2,CACNB2,CACNB2,NSUN6	-811,-947,-947,-947,-811,-811,509894
chrX:27999305-28001142	chrX	+	27999654	28000665	True	NM_182506,NM_001017930	chrX,chrX	+,-	MAGEB10,DCAF8L1	-173598,-88
chr2:175547722-175548023	chr2	+	175548003	175548069	True	NM_024583,NM_001077269	chr2,chr2	+,-	SCRN3,WIPF1	-287597,-376
chr9:35101446-35101706	chr9	+	35101516	35101746	True	NM_032634,NM_203299,NM_152850,NM_013442,NM_001201484	chr9,chr9,chr9,chr9,chr9	-,+,-,-,-	PIGO,C9orf131,PIGO,STOML2,PIGO	-4970,-59344,-4918,1458,-4970
chr5:76332604-76334568	chr5	+	76332774	76334592	True	NM_018046,NR_003014	chr5,chr5	+,-	AGGF1,SNORA47	-6631,41861
chr19:4671356-4671777	chr19	+	4671355	4671777	True	NM_001167942,NM_019107	chr19,chr19	+,-	TNFAIP8L1,C19orf10	-31387,-940
chr16:31733681-31734595	chr16	+	31733680	31734621	True	NR_027011,NM_001130913	chr16,chr16	-,+	CSDAP1,ZNF720	-152835,-9189
chr1:162367054-162367480	chr1	+	162367057	162367497	True	NM_001085375,NM_053282	chr1,chr1	+,-	C1orf226,SH2D1B	-15590,14481
chr12:113912072-113912929	chr12	+	113912076	113912800	True	NM_022363,NM_138432	chr12,chr12	-,+	LHX5,SDSL	-2199,-51911
chr19:41107577-41107892	chr19	+	41107621	41107818	True	NM_001042544,NM_001042545,NM_004756,NM_003573	chr19,chr19,chr19,chr19	+,+,-,+	LTBP4,LTBP4,NUMBL,LTBP4	-4531,-395,88788,-8600
chr4:39480096-39480854	chr4	+	39480152	39480467	True	NR_026854,NM_000661	chr4,chr4	+,-	LOC401127,RPL9	1407,-19584
chr13:53608121-53608498	chr13	+	53608231	53608535	True	NM_032949,NM_006418	chr13,chr13	-,+	PCDH8,OLFM4	-185456,-5407
chr5:147767540-147769307	chr5	+	147767657	147769155	True	NM_205836,NM_030793,NM_001040169	chr5,chr5,chr5	+,+,-	FBXO38,FBXO38,HTR4	-4173,-4173,247526
chr1:208083459-208083911	chr1	+	208083479	208083885	True	NM_001773,NM_001025109,NR_026817	chr1,chr1,chr1	-,-,+	CD34,CD34,LOC148696	848,848,-91807
chr11:6440806-6441052	chr11	+	6440807	6441033	True	NM_001164,NM_145689,NM_001007593	chr11,chr11,chr11	-,-,+	APBB1,APBB1,SMPD1	-507,-163,-29214
chr15:43479558-43480994	chr15	+	43479915	43480961	True	NR_027513,NM_000119,NR_027514,NM_012142,NM_037370	chr15,chr15,chr15,chr15,chr15	+,-,+,+,+	CCNDBP1,EPB42,CCNDBP1,CCNDBP1,CCNDBP1	-2500,32414,-2500,-2500,-1828
chr20:2644979-2645378	chr20	+	2645076	2645392	True	NR_004399,NR_002981,NM_006899,NR_002738,NR_002739,NM_174855,NM_174856	chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,+,-,+,+,-,-	SNORD86,SNORA51,IDH3B,SNORD57,SNORD56,IDH3B,IDH3B	-8384,-9414,-233,-7542,-7857,-233,-233
chr22:39004526-39004891	chr22	+	39004722	39004799	True	NM_001002880,NM_007068	chr22,chr22	+,-	CBY1,DMC1	47858,-38533
chr9:137003642-137004954	chr9	+	137003715	137004845	True	NR_023344,NM_017588,NM_052821	chr9,chr9,chr9	-,+,+	RNU6ATAC,WDR5,WDR5	24897,-2556,68
chr7:26677860-26678505	chr7	+	26677963	26678379	True	NR_022006,NM_001145531	chr7,chr7	-,+	KIAA0087,C7orf71	-99519,-524
chr16:86613437-86613713	chr16	+	86613451	86613695	True	NM_005250,NR_027490	chr16,chr16	+,-	FOXL1,MTHFSD	-1387,-24610
chr1:43854947-43855206	chr1	+	43854964	43855248	True	NM_001012961,NM_201542,NM_052877	chr1,chr1,chr1	+,-,-	C1orf84,MED8,MED8	307,285,285
chr19:6669015-6669416	chr19	+	6669124	6669221	True	NM_003807,NM_172014,NM_004240	chr19,chr19,chr19	-,-,+	TNFSF14,TNFSF14,TRIP10	1429,1429,70485
chr9:127703800-127704274	chr9	+	127703906	127704029	True	NM_030978,NM_002077	chr9,chr9	+,-	ARPC5L,GOLGA1	-72476,-520
chr10:102027410-102027781	chr10	+	102027413	102027681	True	NM_018294,NM_005063	chr10,chr10	-,+	CWF19L1,SCD	8,79090
chr11:14912794-14913300	chr11	+	14912858	14913140	True	NM_024514,NM_000728	chr11,chr11	-,+	CYP2R1,CALCB	661,182005
chr11:6502735-6503504	chr11	+	6502768	6503290	True	NM_012192,NM_006458,NM_033278,NM_012402	chr11,chr11,chr11,chr11	+,-,-,-	FXC1,TRIM3,TRIM3,ARFIP2	-142,-7563,-7563,-173
chr19:16310272-16310712	chr19	+	16310271	16310753	True	NM_001130524,NM_032493,NM_054113	chr19,chr19,chr19	+,+,-	AP1M1,AP1M1,CIB3	-1658,-1658,-25985
chr19:42776187-42776469	chr19	+	42776247	42776477	True	NM_006494,NM_015125	chr19,chr19	-,+	ERF,CIC	-16938,12339
chr19:55670286-55670640	chr19	+	55670325	55670403	True	NM_001126132,NM_001126133,NM_017729,NM_178837,NM_000363,NM_003283	chr19,chr19,chr19,chr19,chr19,chr19	-,-,+,-,-,-	TNNT1,TNNT1,EPS8L1,C19orf51,TNNI3,TNNT1	-9719,-9719,-78617,7665,-1225,-9719
chr17:21114700-21114929	chr17	+	21114804	21114944	True	NM_003876,NM_145109,NR_024547	chr17,chr17,chr17	-,+,-	TMEM11,MAP2K3,TMEM11	3014,73023,3014
chrX:148570010-148570237	chrX	+	148570073	148570239	True	NM_001171907,NM_000202	chrX,chrX	+,-	CXorf40A,IDS	52279,16695
chrX:148570010-148570237	chrX	-	148608283	148608449	False	NM_001171907,NR_027455	chrX,chrX	+,-	CXorf40A,LOC100131434	14069,12913
chr1:6558759-6559268	chr1	+	6558769	6559305	True	NM_001042664,NM_020631,NM_138697,NM_001042663	chr1,chr1,chr1,chr1	-,-,+,-	PLEKHG5,PLEKHG5,TAS1R1,PLEKHG5	-8129,-7009,56032,-1285
chr11:66385987-66386459	chr11	+	66386168	66386496	True	NM_018219,NM_001198845,NM_006328,NM_001198846,NM_001198836,NM_001198837	chr11,chr11,chr11,chr11,chr11,chr11	-,+,+,+,+,+	CCDC87,RBM14-RBM4,RBM14,RBM14-RBM4,RBM14,RBM14	-25614,-2168,-2168,-2168,-2168,-2168
chr2:133040422-133040659	chr2	+	133040556	133040692	True	NM_001508,NR_027020	chr2,chr2	+,-	GPR39,ANKRD30BL	133454,-25014
chr8:23143974-23144744	chr8	+	23144000	23144781	True	NM_001136108,NM_003844	chr8,chr8	+,-	R3HCC1,TNFRSF10A	830,-61320
chr12:123940917-123941488	chr12	+	123940996	123941235	True	NM_022717,NM_180699,NM_145058	chr12,chr12,chr12	+,+,-	SNRNP35,SNRNP35,RILPL2	1415,3150,-19732
chr16:71664449-71665437	chr16	+	71664742	71665118	True	NM_000353,NM_001017967,NM_052858	chr16,chr16,chr16	-,+,+	TAT,MARVELD3,MARVELD3	-53744,-4731,-4731
chr11:36532069-36532280	chr11	+	36532074	36532274	True	NM_145803,NM_000448,NM_004620	chr11,chr11,chr11	-,+,-	TRAF6,RAG1,TRAF6	-252,57288,-252
chr21:43622264-43622570	chr21	+	43622324	43622548	True	NR_027243,NM_207627,NM_207628	chr21,chr21,chr21	-,+,+	C21orf128,ABCG1,ABCG1	-93680,-2576,-2453
chr16:21696701-21697524	chr16	+	21696742	21697567	True	NM_144672,NM_001161683,NM_005849	chr16,chr16,chr16	+,+,-	OTOA,OTOA,IGSF6	-6959,-1044,-32770
chrX:153145451-153145870	chrX	+	153145582	153145880	True	NM_000425,NM_001143963,NM_024003,NR_027419	chrX,chrX,chrX,chrX	-,-,-,+	L1CAM,L1CAM,L1CAM,AVPR2	-4183,-4183,-4183,22104
chr7:100034906-100035160	chr7	+	100034910	100035156	True	NM_001194992,NM_001194991,NM_001194990,NM_019606,NM_017984,NM_145030	chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,-,-	MEPCE,MEPCE,MEPCE,MEPCE,ZCWPW1,C7orf47	-8548,-8548,-8548,-7707,-8608,-816
chr10:70320964-70321292	chr10	+	70321019	70321273	True	NM_030625,NM_152707	chr10,chr10	+,-	TET1,SLC25A16	-953,-33739
chrX:14914315-14915698	chrX	+	14914403	14915659	True	NM_152633,NM_001177475	chrX,chrX	-,+	FANCB,MOSPD2	-23219,-11041
chr1:220920862-220921788	chr1	+	220921269	220921708	True	NM_017898,NM_012414	chr1,chr1	+,-	MOSC2,RAB3GAP2	-33,-475426
chr8:145063360-145063954	chr8	+	145063496	145063956	True	NM_000837,NM_032789,NM_001009184	chr8,chr8,chr8	+,-,+	GRINA,PARP10,GRINA	269,-2861,269
chr1:24118382-24118739	chr1	+	24118437	24118747	True	NM_001008216,NM_000403,NM_001127621,NM_007260	chr1,chr1,chr1,chr1	-,-,-,+	GALE,GALE,GALE,LYPLA2	8597,8337,7363,-842
chr22:38350601-38350892	chr22	+	38350601	38350873	True	NM_032561,NM_021974	chr22,chr22	-,+	C22orf23,POLR2F	-998,-978
chr11:629326-630637	chr11	+	629332	629678	True	NM_031264,NM_021924,NM_001171968,NM_000797,NM_021920	chr11,chr11,chr11,chr11,chr11	-,-,-,+,-	CDHR5,CDHR5,CDHR5,DRD4,SCT	-4265,-4265,-4265,7626,-2159
chr9:88961975-88963863	chr9	+	88962392	88963905	True	NM_001185059,NM_001185074,NM_024617,NM_024635	chr9,chr9,chr9,chr9	-,-,-,+	ZCCHC6,ZCCHC6,ZCCHC6,NAA35	5547,5547,5547,-406396
chr2:114195967-114196409	chr2	+	114195967	114196456	True	NM_172003,NM_013992	chr2,chr2	+,-	CBWD2,PAX8	-750,-159469
chr2:114195967-114196409	chr9	-	178128	178447	False	NM_001145356,NM_001145355,NM_203447,NM_018491	chr9,chr9,chr9,chr9	-,-,+,-	CBWD1,CBWD1,DOCK8,CBWD1	678,678,36417,678
chr2:114195967-114196409	chr9	-	69261646	69261751	False	NM_001085457,NM_001098805	chr9,chr9	-,+	CBWD6,ANKRD20A4	897,120229
chr2:114195967-114196409	chr9	-	70489227	70489332	False	NM_001024916,NM_201453	chr9,chr9	-,-	CBWD5,CBWD3	894,900
chr2:114195967-114196409	chr9	+	70857683	70857788	False	NR_015423,NM_201453	chr9,chr9	-,+	LOC572558,CBWD3	115024,-900
chr7:64125900-64126495	chr7	+	64126095	64126465	True	NM_001013746,NM_001130022,NM_016220	chr7,chr7,chr7	+,-,+	ZNF107,ZNF680,ZNF107	45,-102590,45
chr8:114445861-114447030	chr8	+	114445977	114447029	True	NR_031745,NM_052900,NM_198123	chr8,chr8,chr8	+,-,-	MIR2053,CSMD3,CSMD3	-790306,2263,2263
chr17:72540363-72540747	chr17	+	72540553	72540793	True	NM_152460,NM_006678	chr17,chr17	+,-	C17orf77,CD300C	40263,1539
chr7:96654130-96654780	chr7	+	96654147	96654802	True	NM_005221,NM_005222	chr7,chr7	-,+	DLX5,DLX6	-4,-18908
chr20:43936874-43937153	chr20	+	43936874	43937128	True	NM_003833,NM_030592,NM_030590,NM_014276	chr20,chr20,chr20,chr20	-,-,-,+	MATN4,MATN4,MATN4,RBPJL	29,29,29,-1434
chr5:134735122-134735438	chr5	+	134735173	134735333	True	NM_138609,NM_138610,NM_004893,NM_001040158,NM_178019	chr5,chr5,chr5,chr5,chr5	-,-,-,-,+	H2AFY,H2AFY,H2AFY,H2AFY,CATSPER3	-245,-245,294,-245,-431628
chr17:40719670-40720099	chr17	+	40719687	40720087	True	NM_016556,NM_170607,NM_198204,NM_198205,NM_025233,NM_001042531,NM_001042530,NM_001042532,NM_013290,NM_001042529	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,+,+,+,+,+,+,-,+	PSMC3IP,MLX,MLX,MLX,COASY,COASY,COASY,COASY,PSMC3IP,COASY	9710,-660,-660,-660,-5646,-5646,-5646,-5646,9710,-5646
chr19:19626465-19626865	chr19	+	19626489	19626838	True	NM_032037,NM_015965	chr19,chr19	-,+	TSSK6,NDUFA13	-20,180
chr1:1358525-1359017	chr1	+	1358539	1358791	True	NR_026871,NM_001146685,NM_001145210	chr1,chr1,chr1	-,+,-	LOC441869,TMEM88B,LOC441869	-1889,2716,-1889
chr17:33700360-33700563	chr17	+	33700474	33700570	True	NM_001104587,NM_001104590,NM_001104589,NM_001104588,NM_144975,NM_152270	chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,+,-	SLFN11,SLFN11,SLFN11,SLFN11,SLFN5,SLFN11	200,200,200,200,-130439,200
chr7:55430746-55430946	chr7	+	55430792	55430880	True	NM_018697,NM_030796	chr7,chr7	+,-	LANCL2,VOPP1	2260,209370
chr12:52446492-52447738	chr12	+	52446525	52447371	True	NM_002135,NM_173157,NM_001081492	chr12,chr12,chr12	+,+,-	NR4A1,NR4A1,KRT80	-1390,-1390,138463
chr1:160990383-160990970	chr1	+	160990664	160990846	True	NR_033385,NM_016946	chr1,chr1	+,-	KLHDC9,F11R	77304,337
chr3:49724867-49725181	chr3	+	49724981	49725111	True	NM_022064,NM_020998	chr3,chr3	+,-	RNF123,MST1	1878,1135
chr2:111438223-111439037	chr2	+	111438222	111438542	True	NM_004336,NM_001142807	chr2,chr2	-,+	BUB1,ACOXL	-2538,51607
chr4:186457200-186458365	chr4	+	186457225	186458235	True	NM_001114357,NM_001114107,NM_014476	chr4,chr4,chr4	+,-,-	C4orf47,PDLIM3,PDLIM3	-106731,-513,-513
chr3:192636028-192637350	chr3	+	192636097	192637339	True	NM_020386,NM_178496	chr3,chr3	+,-	HRASLS,MB21D2	321578,-147
chr11:113928943-113929741	chr11	+	113928947	113929779	True	NM_020886,NM_001018011,NM_006006	chr11,chr11,chr11	-,+,+	USP28,ZBTB16,ZBTB16	-182691,1508,651
chrY:14835614-14836643	chrY	+	14835730	14836658	True	NM_004654,NR_033667	chrY,chrY	+,-	USP9Y,GYG2P1	-22622,-302341
chrX:136116126-136116326	chrX	+	136116166	136116340	True	NM_054021,NM_000074	chrX,chrX	-,+	GPR101,CD40LG	-2333,-385881
chr5:43450254-43451027	chr5	+	43450581	43450790	True	NM_022483,NM_012343	chr5,chr5	-,+	C5orf28,NNT	33261,152000
chr5:1346924-1347126	chr5	+	1346923	1347169	True	NM_182632,NM_030782	chr5,chr5	+,-	SLC6A18,CLPTM1L	-121504,-1921
chr3:182512581-182513299	chr3	+	182512592	182513320	True	NM_014616,NM_020640	chr3,chr3	+,-	ATP11B,DCUN1D1	-1357,185056
chr16:16316664-16316972	chr16	+	16316725	16316949	True	NM_001171,NM_001079528,NM_001004067	chr16,chr16,chr16	-,-,+	ABCC6,ABCC6,NOMO3	429,429,9439
chr16:16316664-16316972	chr16	+	14918040	14918184	False	NR_023387,NM_014287	chr16,chr16	-,+	ABCC6P2,NOMO1	425,9458
chr16:16316664-16316972	chr16	-	18582939	18583083	False	NR_003569,NM_173614,NM_001004060	chr16,chr16,chr16	+,-,-	ABCC6P1,NOMO2,NOMO2	-420,-9505,-9505
chr4:113738089-113739360	chr4	+	113738228	113739299	True	NR_029857,NM_001127493	chr4,chr4	-,+	MIR302B,ANK2	-168515,-61
chr12:69890138-69890948	chr12	+	69890231	69890965	True	NM_006654,NR_037475	chr12,chr12	+,-	FRS2,MIR3913-1	-26164,87688
chr11:89955620-89955851	chr11	+	89955656	89955784	True	NM_012124,NM_005467,NM_001144073	chr11,chr11,chr11	-,+,-	CHORDC1,NAALAD2,CHORDC1	798,-87892,798
chr16:81130178-81130571	chr16	+	81130268	81130616	True	NM_004483,NR_033249,NR_033247,NM_015251	chr16,chr16,chr16,chr16	-,-,-,+	GCSH,GCSH,LOC100329108,ATMIN	-288,-288,-314,-60869
chr17:46895659-46895944	chr17	+	46895667	46895977	True	NM_005831,NM_001130918	chr17,chr17	+,-	CALCOCO2,TTLL6	12394,-1198
chr8:38587309-38587849	chr8	+	38587408	38587742	True	NM_001146216,NR_003129	chr8,chr8	+,-	TACC1,RNF5P1	-1755,-128633
chr1:220486997-220488732	chr1	+	220487051	220488655	True	NM_018650,NM_012414	chr1,chr1	+,-	MARK1,RAB3GAP2	212912,-41208
chr17:76623645-76623979	chr17	+	76623810	76623877	True	NM_173628,NM_024419	chr17,chr17	-,+	DNAH17,PGS1	-50334,-249136
chr12:71544305-71544934	chr12	+	71544416	71544851	True	NM_003667,NM_004616	chr12,chr12	+,-	LGR5,TSPAN8	288961,6991
chr19:3222416-3223333	chr19	+	3222755	3223193	True	NM_001172673,NM_198969,NM_021938,NR_033342	chr19,chr19,chr19,chr19	+,-,+,+	CELF5,AES,CELF5,CELF5	1508,-159791,1507,2289
chr5:161298801-161300199	chr5	+	161298800	161300234	True	NM_001127648,NM_021911	chr5,chr5	+,-	GABRA1,GABRB2	-21157,-323670
chr19:46417253-46417553	chr19	+	46417262	46417590	True	NM_004497,NM_001029861	chr19,chr19	+,-	FOXA3,NANOS2	-49795,496
chr22:17602559-17603816	chr22	+	17602726	17603808	True	NM_031890,NM_001163079,NM_014339,NR_024482	chr22,chr22,chr22,chr22	-,-,+,+	CECR6,CECR6,IL17RA,CECR4	-513,-469,-36926,36470
chr14:102977299-102977846	chr14	+	102977379	102977877	True	NM_152326,NR_036192	chr14,chr14	-,+	ANKRD9,MIR4309	-1251,28103
chr4:15963650-15963879	chr4	+	15963658	15963926	True	NM_031950,NM_001775	chr4,chr4	-,+	FGFBP2,CD38	983,-183778
chr7:6745272-6745921	chr7	+	6745433	6745825	True	NR_002217,NM_006956,NM_016265	chr7,chr7,chr7	+,-,-	PMS2CL,ZNF12,ZNF12	29110,791,791
chr5:141017404-141017625	chr5	+	141017440	141017622	True	NM_001130029,NM_173828,NM_003883	chr5,chr5,chr5	+,+,-	RELL2,RELL2,HDAC3	-974,-974,-1017
chr13:90016095-90017994	chr13	+	90016903	90017860	True	NR_030754,NR_027039	chr13,chr13	+,-	MIR622,LOC144776	865575,1561052
chr13:43597329-43597625	chr13	+	43597377	43597669	True	NM_013238,NM_033255	chr13,chr13	+,-	DNAJC15,EPSTI1	-66,-31000
chr13:96342120-96342778	chr13	+	96342119	96342191	True	NM_006260,NM_198968	chr13,chr13	+,-	DNAJC3,DZIP1	-12780,-45162
chr11:33726238-33726686	chr11	+	33726248	33726732	True	NM_012194,NM_001166692	chr11,chr11	+,-	C11orf41,C11orf91	-162422,-3962
chr1:156721777-156722145	chr1	+	156721838	156722192	True	NM_004494,NM_005973,NM_001126051,NM_001126050	chr1,chr1,chr1,chr1	-,+,-,-	HDGF,PRCC,HDGF,HDGF	-295,15081,-28,98
chr2:162543483-162544210	chr2	+	162543676	162544157	True	NM_001935,NM_022058	chr2,chr2	-,+	DPP4,SLC4A10	386955,-62895
chr22:17469341-17469733	chr22	+	17469439	17469731	True	NR_015352,NM_001037814	chr22,chr22	+,-	CECR7,GAB4	47728,19431
chr10:101686324-101686809	chr10	+	101686470	101686740	True	NR_024130,NM_015221	chr10,chr10	+,-	DNMBP-AS1,DNMBP	225,82986
chr12:49741173-49741529	chr12	+	49741249	49741419	True	NM_001008223,NM_024902	chr12,chr12	-,+	C1QL4,DNAJC22	-10278,-259
chr7:66344902-66346575	chr7	+	66345107	66346315	True	NR_003934,NM_017994	chr7,chr7	-,+	LOC729156,C7orf42	-35294,39887
chr22:25363814-25364350	chr22	+	25363972	25364246	True	NM_001145206,NM_001001663	chr22,chr22	+,-	KIAA1671,TMEM211	59694,-28658
chr12:93769854-93771021	chr12	+	93770060	93771032	True	NM_003348,NM_199040,NM_019094,NR_002212	chr12,chr12,chr12,chr12	-,+,+,+	UBE2N,NUDT4,NUDT4,NUDT4P1	65046,668,668,713
chr6:76456834-76458436	chr6	+	76457093	76458336	True	NM_015687,NM_004999	chr6,chr6	-,+	FILIP1,MYO6	-253597,572
chr13:101329412-101331223	chr13	+	101330808	101331210	True	NM_032813,NM_001178004,NM_001079669	chr13,chr13,chr13	-,+,-	TMTC4,PCCA,TMTC4	-3705,-589599,-3705
chr10:50821197-50822166	chr10	+	50821205	50822193	True	NM_000124,NM_020984,NM_001142934,NM_001142933,NM_001142929,NM_020549,NM_003055,NM_020985,NM_020986	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,+,+,+,+,+,+,+,+	ERCC6,CHAT,CHAT,CHAT,CHAT,CHAT,SLC18A3,CHAT,CHAT	-74058,-4115,-111,-111,-111,-111,-2909,-102,-102
chr12:131439119-131439383	chr12	+	131439150	131439326	True	NM_194356,NM_198827	chr12,chr12	-,+	STX2,GPR133	-115339,-749
chr19:11926014-11926439	chr19	+	11926138	11926368	True	NM_152357,NM_001080493	chr19,chr19	+,-	ZNF440,ZNF823	-1082,-76378
chr16:1128421-1128627	chr16	+	1128434	1128632	True	NM_001172560,NM_001053,NR_027242	chr16,chr16,chr16	+,+,-	SSTR5,SSTR5,LOC146336	-5729,148,149
chr7:119463829-119464307	chr7	+	119463829	119464331	True	NM_012281,NM_012338	chr7,chr7	+,-	KCND2,TSPAN12	449390,1033902
chr1:7842340-7843095	chr1	+	7842576	7843094	True	NM_006786,NM_016831	chr1,chr1	-,+	UTS2,PER3	70060,1668
chr21:43343395-43343937	chr21	+	43343472	43343913	True	NM_199050,NR_027273	chr21,chr21	-,+	C2CD2,C21orf121	2937,98199
chr10:77551903-77552113	chr10	+	77551912	77552026	True	NM_032772,NM_032024	chr10,chr10	-,+	ZNF503,C10orf11	-390399,-9451
chr2:37311209-37311443	chr2	+	37311258	37311430	True	NM_174931,NM_019024	chr2,chr2	+,-	CCDC75,HEATR5B	163,105
chr1:6451538-6452375	chr1	+	6451657	6452394	True	NM_007274,NM_181864,NM_031475	chr1,chr1,chr1	-,-,+	ACOT7,ACOT7,ESPN	1482,-5774,32453
chr4:25236429-25236922	chr4	+	25236636	25236960	True	NM_018323,NM_016955	chr4,chr4	+,-	PI4K2B,SEPSECS	-1035,-74432
chr12:69001356-69002895	chr12	+	69001694	69002692	True	NM_015646,NM_001010942,NR_033335	chr12,chr12,chr12	+,+,-	RAP1B,RAP1B,SNORA70G	1959,1959,18523
chr17:21437449-21438068	chr17	+	21437475	21438021	True	NM_001113434,NM_001194958	chr17,chr17	-,+	C17orf51,KCNJ18	16970,-129078
chr4:78741922-78742143	chr4	+	78741934	78742192	True	NM_020236,NM_144571	chr4,chr4	+,-	MRPL1,CNOT6L	41612,-1390
chr16:89628792-89629203	chr16	+	89628800	89629194	True	NM_033251,NR_002450,NM_000977,NM_013275	chr16,chr16,chr16,chr16	+,+,+,-	RPL13,SNORD68,RPL13,ANKRD11	-1720,-1013,-1761,-71831
chr16:65157060-65157507	chr16	+	65157171	65157412	True	NM_001795,NM_001797	chr16,chr16	+,-	CDH5,CDH11	1243112,-1252
chr1:13701494-13702310	chr1	+	13701628	13702110	True	NM_001099790,NM_001099850,NM_001099851	chr1,chr1,chr1	-,-,+	PRAMEF19,PRAMEF18,PRAMEF17	-3223,-3223,13977
chr1:13701494-13702310	chr1	+	13480791	13481273	False	NM_001045480,NM_001099790,NM_001099850	chr1,chr1,chr1	+,-,-	PRAMEF16,PRAMEF19,PRAMEF18	13980,-3222,-3222
chr7:80549169-80549533	chr7	+	80549173	80549586	True	NM_006379,NM_001127444	chr7,chr7	-,+	SEMA3C,CD36	-506,-273469
chr22:29132533-29133616	chr22	+	29132540	29133281	True	NM_007194,NM_001005735,NM_172002,NM_145862	chr22,chr22,chr22,chr22	-,-,+,-	CHEK2,CHEK2,HSCB,CHEK2	4599,4599,4761,4599
chr5:10443713-10444493	chr5	+	10443836	10444184	True	NM_031916,NM_138809,NM_001201466	chr5,chr5,chr5	+,-,+	ROPN1L,CMBL,ROPN1L	-1913,-135668,-1913
chr18:33254452-33254869	chr18	+	33254488	33254680	True	NM_194281,NM_020474	chr18,chr18	-,+	INO80C,GALNT1	-176533,-20006
chr1:225649444-225649952	chr1	+	225649444	225649908	True	NM_194442,NM_001130440	chr1,chr1	-,+	LBR,SRP9	-32887,315606
chr16:29283220-29283561	chr16	+	29283406	29283610	True	NR_002939,NM_001031827	chr16,chr16	+,-	RUNDC2C,BOLA2	18930,182725
chr16:29283220-29283561	chr16	+	88279306	88279631	False	NM_001127464,NM_001739	chr16,chr16	+,-	ZNF469,CA5A	214247,-309194
chr20:46618804-46619931	chr20	+	46618831	46619978	True	NR_026958,NM_198596	chr20,chr20	+,-	LOC284749,SULF2	368675,-203471
chr11:59834549-59835240	chr11	+	59834548	59835210	True	NM_006138,NM_152851	chr11,chr11	+,-	MS4A3,MS4A6A	-10509,115524
chr1:109827559-109828694	chr1	+	109827817	109828455	True	NM_001408,NM_001005290,NM_032636,NM_001032291	chr1,chr1,chr1,chr1	+,-,-,-	CELSR2,PSRC1,PSRC1,PSRC1	-35227,-2027,-2027,-2027
chr8:144499633-144499964	chr8	+	144499638	144499980	True	NM_201589,NM_052924	chr8,chr8	-,+	MAFA,RHPN1	12672,-48664
chr10:43949659-43950502	chr10	+	43949824	43950454	True	NR_026693,NM_001098204	chr10,chr10	+,-	ZNF487P,HNRNPF	-17313,-45128
chr19:55884882-55885639	chr19	+	55885027	55885545	True	NM_000641,NM_139172	chr19,chr19	-,+	IL11,TMEM190	-3213,2658
chr10:118899229-118899463	chr10	+	118899440	118899512	True	NM_001112704,NM_199131,NM_181840	chr10,chr10,chr10	-,-,+	VAX1,VAX1,KCNK18	-1628,-1628,57487
chr14:105443275-105443558	chr14	+	105443278	105443428	True	NM_174891,NM_138420	chr14,chr14	+,-	C14orf79,AHNAK2	9187,1316
chr6:150069370-150069665	chr6	+	150069504	150069665	True	NM_005389,NM_198887	chr6,chr6	+,-	PCMT1,NUP43	1165,-1816
chr1:230204902-230206313	chr1	+	230205047	230206327	True	NM_004481,NM_024554	chr1,chr1	+,-	GALNT2,PGBD5	-2143,307114
chr9:70096855-70097553	chr9	+	70097460	70097536	True	NM_001126334,NR_024443	chr9,chr9	-,+	FOXD4L5,LOC100133920	81329,-446150
chr12:48881822-48882298	chr12	+	48881914	48882346	True	NM_152319,NM_002289	chr12,chr12	+,-	C12orf54,LALBA	-5686,81539
chr19:42187949-42188545	chr19	+	42188106	42188590	True	NM_004363,NM_006890	chr19,chr19	+,-	CEACAM5,CEACAM7	23939,3556
chr17:40305716-40306917	chr17	+	40305784	40306736	True	NM_004583,NM_201434,NM_033194	chr17,chr17,chr17	-,-,+	RAB5C,RAB5C,HSPB9	336,336,-31079
chr2:71357298-71357667	chr2	+	71357348	71357708	True	NM_005791,NM_032601	chr2,chr2	+,-	MPHOSPH10,MCEE	45,46
chr3:157824504-157824904	chr3	+	157824534	157824786	True	NM_001163678,NM_003030,NM_006884,NM_016625	chr3,chr3,chr3,chr3	-,-,-,+	SHOX2,SHOX2,SHOX2,RSRC1	-582,-582,-582,3105
chr3:149933107-149934126	chr3	+	149933308	149934146	True	NM_053024,NM_014779	chr3,chr3	-,+	PFN2,TSC22D2	-244567,192641
chr16:71489553-71491320	chr16	+	71489579	71490952	True	NM_145911,NM_005769	chr16,chr16	-,+	ZNF23,CHST4	5216,69070
chr11:107257871-107259199	chr11	+	107257871	107259034	True	NM_001130037,NM_152434	chr11,chr11	+,-	ELMOD1,CWF19L2	202782,69595
chr3:49065265-49066475	chr3	+	49065366	49066516	True	NM_001009996,NM_199074,NM_199073,NR_029948,NM_199070,NM_000884,NR_029690,NM_018114,NM_199069	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,+,-,+,-,-,-,+	DALRD3,NDUFAF3,NDUFAF3,MIR425,NDUFAF3,IMPDH2,MIR191,DALRD3,NDUFAF3	-9349,-7509,-6799,-7699,-6343,409,-7224,-6899,-6343
chr17:37558070-37558392	chr17	+	37558097	37558411	True	NM_001184906,NM_015083,NM_032875	chr17,chr17,chr17	-,+,-	FBXL20,CDK12,FBXL20	-188,59327,-188
chr15:67834117-67834629	chr15	+	67834211	67834589	True	NM_002757,NM_145160,NM_024666	chr15,chr15,chr15	+,+,-	MAP2K5,MAP2K5,AAGAB	431,431,-287137
chr9:125131997-125132231	chr9	+	125132136	125132240	True	NR_027126,NM_080591,NM_000962	chr9,chr9,chr9	-,+,+	RBM18,PTGS1,PTGS1	-104993,988,988
chr21:28517384-28518741	chr21	+	28517434	28518458	True	NR_024357,NM_007038	chr21,chr21	+,-	NCRNA00113,ADAMTS5	576239,-177995
chr3:52099638-52100010	chr3	+	52099642	52099910	True	NM_001198898,NM_001947,NR_027331	chr3,chr3,chr3	+,-,-	ACY1,DUSP7,C3orf74	-82393,-9181,-514
chr16:1019684-1020044	chr16	+	1019775	1019873	True	NR_033646,NM_014587,NM_022773	chr16,chr16,chr16	-,+,-	LMF1,SOX8,LMF1	1161,11934,1161
chr19:55956042-55956979	chr19	+	55956099	55956833	True	NM_033113,NM_001145176	chr19,chr19	+,-	ZNF628,SHISA7	30865,-1869
chr16:1292465-1292804	chr16	+	1292511	1292823	True	NM_024164,NM_003294	chr16,chr16	-,+	TPSB2,TPSAB1	-12326,-1884
chr16:1292465-1292804	chr16	-	1278067	1278379	False	NM_012467,NM_024164,NM_003294	chr16,chr16,chr16	-,-,+	TPSG1,TPSB2,TPSAB1	-2813,1856,12298
chr1:187186370-187186637	chr1	+	187186371	187186621	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-536812,-388391
chr2:135783114-135784669	chr2	+	135783289	135784574	True	NM_001018046,NM_025052,NM_001172435	chr2,chr2,chr2	-,-,+	YSK4,YSK4,RAB3GAP1	-1041,-1041,25260
chr1:192995188-192996534	chr1	+	192995455	192996543	True	NM_001173524,NM_001199261	chr1,chr1	+,-	TROVE2,UCHL5	32008,32036
chrX:26213113-26214964	chrX	+	26213467	26214995	True	NM_139058,NM_173523	chrX,chrX	-,+	ARX,MAGEB6	-1179402,-2970
chrX:47009052-47009658	chrX	+	47009051	47009141	True	NR_024235,NR_024234,NM_019056,NM_001135998,NM_005676,NM_001204467,NM_001204466,NM_152856,NM_001204468	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,+,+,+,+,+	NDUFB11,NDUFB11,NDUFB11,NDUFB11,RBM10,RBM10,RBM10,RBM10,RBM10	-4442,-4442,-4956,-4956,-4496,-4496,-4496,-4496,-4496
chr16:46655435-46657028	chr16	+	46655641	46656599	True	NM_014321,NM_024745	chr16,chr16	+,-	ORC6,SHCBP1	66958,-330
chr1:156862297-156862707	chr1	+	156862307	156862371	True	NM_014215,NM_001080471	chr1,chr1	-,+	INSRR,PEAR1	-33595,1151
chr3:107810406-107810676	chr3	+	107810520	107810724	True	NM_198793,NR_015394,NM_001777	chr3,chr3,chr3	-,+,-	CD47,LOC285205,CD47	-585,-208519,-585
chr8:67343715-67344188	chr8	+	67343902	67344228	True	NM_001080416,NM_015169,NM_144650	chr8,chr8,chr8	-,+,+	MYBL1,RRS1,ADHFE1	181302,-2702,489
chr1:25740964-25741997	chr1	+	25741150	25741754	True	NM_020485,NM_138618,NM_138616,NM_138617,NM_018202	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	RHCE,RHCE,RHCE,RHCE,TMEM57	5659,5659,5659,5659,15633
chr1:25740964-25741997	chr1	-	25604571	25604970	False	NM_001127691,NM_020317,NM_016124	chr1,chr1,chr1	+,-,+	RHD,C1orf63,RHD	-5641,-30586,-5641
chr3:12881670-12882083	chr3	+	12881804	12882132	True	NM_001007073,NM_012298,NR_002582,NM_000994,NM_001007074	chr3,chr3,chr3,chr3,chr3	-,+,-,-,-	RPL32,CAND2,SNORA7A,RPL32,RPL32	999,-43684,-9,999,-9
chr3:12881670-12882083	chr3	+	129116200	129116784	False	NR_003111,NM_018262,NR_002992	chr3,chr3,chr3	-,+,-	RPL32P3,IFT122,SNORA7B	1968,42183,-9
chr3:72499299-72499602	chr3	+	72499459	72499631	True	NM_001080393,NM_012234	chr3,chr3	+,-	GXYLT2,RYBP	437753,-3685
chr12:2902995-2903255	chr12	+	2903117	2903303	True	NM_002014,NR_033958	chr12,chr12	+,-	FKBP4,LOC283440	804,-22282
chr4:81950158-81951160	chr4	+	81950163	81951182	True	NM_006259,NM_001201	chr4,chr4	-,+	PRKG2,BMP3	175083,936
chr15:22710246-22711576	chr15	+	22710922	22711216	True	NR_027407,NM_001001413	chr15,chr15	-,+	GOLGA8DP,GOLGA6L1	4562,25029
chr15:22710246-22711576	chr15	-	23439825	23439875	False	NR_002824,NR_033350	chr15,chr15	-,+	HERC2P2,GOLGA8E	-61566,-4806
chr1:6553874-6555686	chr1	+	6554725	6555703	True	NM_001042665,NM_001042664,NM_020631,NM_138697,NM_001042663	chr1,chr1,chr1,chr1,chr1	-,-,-,+,-	PLEKHG5,PLEKHG5,PLEKHG5,TAS1R1,PLEKHG5	-8711,-4085,-2965,59634,1831
chr16:29820079-29820432	chr16	+	29820131	29820473	True	NM_001042539,NM_145239,NM_002383,NM_006319,NM_024516	chr16,chr16,chr16,chr16,chr16	+,+,+,-,+	MAZ,PRRT2,MAZ,CDIPT,C16orf53	-2327,2935,-2327,54155,7054
chr6:42793275-42794131	chr6	+	42793495	42793971	True	NM_015349,NM_001008739	chr6,chr6	+,-	KIAA0240,C6orf226	-4763,64633
chr17:34079093-34079587	chr17	+	34079149	34079535	True	NM_145272,NM_139285	chr17,chr17	+,-	C17orf50,GAS2L2	8380,412
chr9:115873911-115874719	chr9	+	115873988	115874720	True	NR_024376,NR_024366	chr9,chr9	-,+	NCRNA00256B,NCRNA00256A	-31,455
chr1:93253058-93253746	chr1	+	93253323	93253676	True	NM_005665,NM_000969	chr1,chr1	-,+	EVI5,RPL5	4344,43917
chr11:63652637-63652865	chr11	+	63652673	63652841	True	NM_017490,NM_173587	chr11,chr11	+,-	MARK2,RCOR2	3145,31525
chr17:74447934-74448154	chr17	+	74447936	74448180	True	NM_022066,NM_001166579	chr17,chr17	-,+	UBE2O,AANAT	1158,1252
chrX:10126876-10127821	chrX	+	10126884	10127669	True	NM_001830,NM_000273	chrX,chrX	+,-	CLCN4,GPR143	-1950,-392879
chr21:45717821-45718832	chr21	+	45718048	45718521	True	NR_024108,NM_000658,NM_002626,NM_175867	chr21,chr21,chr21,chr21	+,+,+,-	PFKL,AIRE,PFKL,DNMT3L	1403,-7838,1408,-35949
chr19:41697129-41697692	chr19	+	41697321	41697423	True	NM_030622,NM_000660	chr19,chr19	+,-	CYP2S1,TGFB1	1691,162460
chr18:71958936-71959187	chr18	+	71958979	71959117	True	NM_001914,NM_148923,NM_001190807,NM_001174123	chr18,chr18,chr18,chr18	-,-,-,+	CYB5A,CYB5A,CYB5A,DKFZP781G0119	184,184,184,23992
chr17:49338902-49339738	chr17	+	49338996	49339388	True	NM_017643,NM_016001	chr17,chr17	-,+	MBTD1,UTP18	-1569,-1158
chr22:35463249-35463559	chr22	+	35463369	35463535	True	NM_001008494,NM_005368	chr22,chr22	+,-	ISX,MB	-1297,549899
chr21:30452270-30453590	chr21	+	30452286	30453382	True	NM_020152,NM_006585	chr21,chr21	+,-	C21orf7,CCT8	-8,-6276
chr1:117905805-117907446	chr1	+	117906299	117907443	True	NM_006699,NM_024626	chr1,chr1	+,-	MAN1A2,VTCN1	2641,-152750
chr17:42786337-42786717	chr17	+	42786440	42786706	True	NM_145663,NM_144609,NM_025104,NR_036623	chr17,chr17,chr17,chr17	+,-,+,+	DBF4B,CCDC43,DBF4B,DBF4B	-515,-19275,-515,-515
chr6:11382202-11382593	chr6	+	11382277	11382631	True	NM_001142393,NM_001100829	chr6,chr6	-,+	NEDD9,TMEM170B	0,155879
chr15:43622829-43624776	chr15	+	43622856	43624441	True	NM_001159280,NM_014793,NM_001012969	chr15,chr15,chr15	+,-,+	ADAL,LCMT2,ADAL	-35,-36,-35
chr10:6351776-6352107	chr10	+	6351782	6352001	True	NM_004566,NM_000417	chr10,chr10	+,-	PFKFB3,IL2RA	-106996,-247449
chr17:8664724-8665620	chr17	+	8664739	8665271	True	NM_004822,NM_001128076	chr17,chr17	+,-	NTN1,SPDYE4	259587,-2862
chr10:61127457-61128544	chr10	+	61127629	61128242	True	NM_001143773,NM_001143774,NM_198215,NM_001001971,NM_001166698	chr10,chr10,chr10,chr10,chr10	-,+,-,-,-	FAM13C,PHYHIPL,FAM13C,FAM13C,FAM13C	-4968,-190458,-5277,-5277,-5277
chr22:39353715-39353934	chr22	+	39353743	39353925	True	NM_014292,NM_001193289,NM_145699	chr22,chr22,chr22	-,+,+	CBX6,APOBEC3A,APOBEC3A	-85485,-267,-267
chr2:191521127-191522123	chr2	+	191521208	191522142	True	NM_005966,NM_001142645	chr2,chr2	+,-	NAB1,TMEM194B	-7411,-121740
chr22:50788166-50788954	chr22	+	50788561	50788998	True	NM_001001794,NM_014678	chr22,chr22	-,+	FAM116B,PPP6R2	-23072,-6861
chr14:76039919-76040152	chr14	+	76039922	76039982	True	NM_017791,NM_007176	chr14,chr14	+,-	FLVCR2,C14orf1	4957,87606
chr15:89455544-89455799	chr15	+	89455553	89455701	True	NM_013227,NM_001114614,NM_005928	chr15,chr15,chr15	+,-,-	ACAN,MFGE8,MFGE8	-108930,1014,1014
chr20:34240933-34241238	chr20	+	34240937	34241157	True	NM_003915,NM_003116	chr20,chr20	-,+	CPNE1,SPAG4	724,-37179
chrX:119008216-119008610	chrX	+	119008289	119008506	True	NM_006978,NM_004541	chrX,chrX	-,+	RNF113A,NDUFA1	-2498,-2613
chr4:140373892-140374508	chr4	+	140373939	140374508	True	NM_031296,NM_030648	chr4,chr4	+,-	RAB33B,SETD7	452,103119
chr19:46474267-46474974	chr19	+	46474282	46474899	True	NM_002516,NM_001080402	chr19,chr19	-,+	NOVA2,CCDC61	1808,23439
chr1:153748144-153748375	chr1	+	153748202	153748316	True	NM_024330,NM_004515	chr1,chr1	+,-	SLC27A3,ILF2	-485,-104723
chr6:27775003-27775371	chr6	+	27775007	27775327	True	NM_003536,NM_003509,NM_003521,NM_003519,NM_021066	chr6,chr6,chr6,chr6,chr6	+,+,+,-,-	HIST1H3H,HIST1H2AI,HIST1H2BM,HIST1H2BL,HIST1H2AJ	2514,649,7494,432,7241
chr1:14926132-14926983	chr1	+	14926151	14926995	True	NM_201628,NM_015209,NR_027136	chr1,chr1,chr1	+,+,-	KAZN,KAZN,C1orf126	-989,-989,552016
chr13:36050301-36050773	chr13	+	36050341	36050735	True	NM_001204197,NM_005584	chr13,chr13	+,-	NBEA,MAB21L1	150,147
chr11:48236781-48237148	chr11	+	48236849	48237047	True	NM_001005470,NM_001005513	chr11,chr11	+,-	OR4B1,OR4C45	1314,137008
chr19:54468583-54469241	chr19	+	54468697	54469177	True	NM_198481,NM_031895	chr19,chr19	-,+	VSTM1,CACNG8	98080,-2458
chr1:32671762-32672478	chr1	+	32671793	32672477	True	NM_001160042,NM_018134,NM_001099434,NM_024296,NM_019118	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	IQCC,IQCC,DCDC2B,CCDC28B,TMEM234	-608,-608,2217,-5642,15499
chr20:32147986-32148774	chr20	+	32148140	32148640	True	NM_005093,NM_001039709,NM_031231	chr20,chr20,chr20	+,+,-	CBFA2T2,CBFA2T2,NECAB3	1530,1530,113690
chr16:66854894-66856328	chr16	+	66855000	66856221	True	NM_003905,NM_005182,NM_001018159,NM_001018160	chr16,chr16,chr16,chr16	-,+,-,-	NAE1,CA7,NAE1,NAE1	8708,22060,8708,8708
chr7:43946440-43947771	chr7	+	43946482	43947570	True	NM_017920,NM_001204871,NM_001077663,NM_015983	chr7,chr7,chr7,chr7	-,-,-,+	URGCP,URGCP-MRPS24,URGCP,UBE2D4	-251,-251,-251,18464
chr1:109634246-109635920	chr1	+	109634261	109635618	True	NM_020141,NR_003023,NM_005645	chr1,chr1,chr1	+,+,-	TMEM167B,SCARNA2,TAF13	-912,7196,-15637
chr5:10638026-10638941	chr5	+	10638107	10638964	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-73724,122474
chr7:1652527-1652993	chr7	+	1652720	1652802	True	NM_001134340,NR_001288	chr7,chr7	-,+	PSMG3,TFAMP1	-43052,1303
chr5:6584557-6584850	chr5	+	6584561	6584895	True	NR_024424,NR_024423,NM_001193455	chr5,chr5,chr5	+,+,-	LOC255167,LOC255167,NSUN2	-1202,-2325,48628
chr18:52614310-52615076	chr18	+	52614452	52614990	True	NM_004163,NM_001143829	chr18,chr18	+,-	RAB27B,CCDC68	-118664,10347
chr7:64611696-64612025	chr7	+	64611799	64611903	True	NR_027393,NM_001007253	chr7,chr7	+,-	INTS4L1,ERV3	-10254,-144675
chr7:64611696-64612025	chr7	-	65009356	65009460	False	NM_000181,NR_027392	chr7,chr7	-,+	GUSB,INTS4L2	437898,103316
chr7:64611696-64612025	chr7	+	65123020	65123124	False	NM_000181,NR_027392	chr7,chr7	-,+	GUSB,INTS4L2	324229,-10301
chr7:64611696-64612025	chr11	-	77668605	77668703	False	NM_003251,NM_033547	chr11,chr11	+,-	THRSP,INTS4	106203,37069
chr9:74383186-74383397	chr9	+	74383286	74383440	True	NM_001135820,NM_013390,NM_182505	chr9,chr9,chr9	-,-,+	TMEM2,TMEM2,C9orf85	410,410,142982
chr10:73976047-73976645	chr10	+	73976256	73976694	True	NM_001198799,NM_001198800,NM_173473,NM_015947,NM_001198798	chr10,chr10,chr10,chr10,chr10	-,-,+,-,-	ASCC1,ASCC1,ANAPC16,ASCC1,ASCC1	-73,-73,-501,-505,-505
chr20:55925867-55926270	chr20	+	55926137	55926257	True	NM_001190472,NM_001015885,NM_003610	chr20,chr20,chr20	-,+,+	MTRNR2L3,RAE1,RAE1	8671,360,-48
chr9:139686926-139688668	chr9	+	139687157	139688392	True	NM_001039374,NM_032928,NR_024580	chr9,chr9,chr9	+,+,-	KIAA1984,TMEM141,LOC100131193	2397,-1431,14959
chr4:88439535-88440313	chr4	+	88439545	88440150	True	NM_014208,NM_001128310	chr4,chr4	+,-	DSPP,SPARCL1	89530,10570
chr5:140805569-140805884	chr5	+	140805579	140805859	True	NM_032091,NM_018927,NM_032092,NM_003735,NM_032101,NM_005642,NM_018914,NR_001297,NM_032094	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,-,+,+,+	PCDHGA11,PCDHGB7,PCDHGA11,PCDHGA12,PCDHGB7,TAF7,PCDHGA11,PCDHGB8P,PCDHGA12	-5093,-8370,-5093,4298,-8416,-105228,-5093,-7,4298
chr16:84400168-84401751	chr16	+	84400551	84401470	True	NM_014861,NM_172347	chr16,chr16	+,-	ATP2C2,KCNG4	662,-127195
chr3:155349911-155351498	chr3	+	155350047	155351380	True	NM_001130960,NM_003875	chr3,chr3	-,+	PLCH1,GMPS	42775,236944
chrX:46937195-46937592	chrX	+	46937216	46937575	True	NM_004683,NM_152869,NM_001135998	chrX,chrX,chrX	+,+,-	RGN,RGN,NDUFB11	199,199,66570
chr5:10762287-10762927	chr5	+	10762294	10762852	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-197917,-907
chr10:82043775-82045672	chr10	+	82044110	82045369	True	NM_000429,NM_032372	chr10,chr10	-,+	MAT1A,DYDC2	4116,71188
chr20:25372657-25372934	chr20	+	25372707	25372779	True	NM_015600,NM_021067,NM_001042472	chr20,chr20,chr20	-,+,-	ABHD12,GINS1,ABHD12	-1089,15543,-1089
chr17:9931513-9932527	chr17	+	9931794	9932540	True	NM_004246,NM_201432,NM_001130831	chr17,chr17,chr17	+,-,-	GLP2R,GAS7,GAS7	-202472,7574,-2171
chr18:59556062-59556407	chr18	+	59556104	59556424	True	NM_020854,NM_173557	chr18,chr18	+,-	KIAA1468,RNF152	298099,3930
chr1:91853143-91854809	chr1	+	91853534	91854659	True	NM_001134419,NM_001017975	chr1,chr1	+,-	CDC7,HFM1	111744,15824
chr15:45879991-45880952	chr15	+	45880074	45880979	True	NM_012388,NM_013309	chr15,chr15	+,-	PLDN,SLC30A4	-716,-65072
chr13:29293448-29294597	chr13	+	29293506	29294338	True	NM_181785,NM_001135919,NM_015932	chr13,chr13,chr13	-,-,+	SLC46A3,SLC46A3,POMP	-356,-356,-60416
chr4:146538499-146540052	chr4	+	146538688	146540079	True	NM_178835,NM_172250	chr4,chr4	-,+	ZNF827,MMAA	319578,460
chr19:17187706-17187920	chr19	+	17187714	17187968	True	NM_001130065,NM_001011699,NM_033417,NM_004145	chr19,chr19,chr19,chr19	+,-,-,+	MYO9B,HAUS8,HAUS8,MYO9B	-1174,-1371,-1371,-1174
chr17:40076210-40076766	chr17	+	40076258	40076488	True	NM_031421,NM_198830,NM_001096	chr17,chr17,chr17	+,-,-	TTC25,ACLY,ACLY	10399,-986,-986
chr16:68060052-68060701	chr16	+	68060187	68060509	True	NM_017803,NM_018380	chr16,chr16	+,-	DUS2L,DDX28	-3040,-2417
chr1:44821110-44823038	chr1	+	44821290	44822974	True	NM_018150,NM_024066	chr1,chr1	+,-	RNF220,ERI3	47985,-351
chr1:90287582-90288140	chr1	+	90287683	90288165	True	NM_018103,NM_001134479,NR_002830	chr1,chr1,chr1	+,+,-	LRRC8D,LRRC8D,GEMIN8P4	-254,-1161,172410
chr2:153029307-153030001	chr2	+	153029420	153029854	True	NM_052905,NM_005843	chr2,chr2	+,-	FMNL2,STAM2	161896,2714
chr11:76742259-76742878	chr11	+	76742398	76742820	True	NM_182833,NM_138706	chr11,chr11	-,+	GDPD4,B3GNT6	255703,2614
chrX:80456192-80457492	chrX	+	80456365	80457457	True	NM_030763,NM_003022	chrX,chrX	-,+	HMGN5,SH3BGRL	44,-27
chr3:124609339-124610328	chr3	+	124609355	124610235	True	NM_002213,NR_033437	chr3,chr3	-,+	ITGB5,UMPS	-3211,-160193
chr9:79634963-79635210	chr9	+	79635081	79635161	True	NM_015225,NM_001013735	chr9,chr9	-,+	PRUNE2,FOXB2	-114078,-561
chr2:75062828-75064444	chr2	+	75062973	75064385	True	NM_138804,NM_000189	chr2,chr2	-,+	C2orf65,HK2	-187809,-3242
chr8:17433515-17434121	chr8	+	17433546	17434102	True	NM_020749,NM_006207	chr8,chr8	-,+	MTUS1,PDGFRL	121194,5
chr10:48439265-48440937	chr10	+	48439417	48440809	True	NM_004962,NM_153034	chr10,chr10	-,+	GDF10,ZNF488	-279,-84379
chr21:43788075-43789713	chr21	+	43788211	43789653	True	NM_003225,NM_001001895	chr21,chr21	-,+	TFF1,UBASH3A	-1567,34365
chr9:116344530-116344783	chr9	+	116344549	116344791	True	NM_017443,NM_021106	chr9,chr9	-,+	POLE3,RGS3	-171520,-1673
chr22:25160376-25160710	chr22	+	25160381	25160511	True	NM_001008496,NR_001283	chr22,chr22	-,+	PIWIL3,TOP1P2	10230,2
chr17:29649420-29650040	chr17	+	29649734	29649988	True	NM_032932,NM_001003927,NM_014210,NM_006495	chr17,chr17,chr17,chr17	+,-,-,-	RAB11FIP4,EVI2A,EVI2A,EVI2B	68653,-967,-967,-8604
chr9:123636872-123637814	chr9	+	123636876	123637835	True	NM_015651,NR_024408,NM_001009936	chr9,chr9,chr9	-,+,-	PHF19,LOC253039,PHF19	1821,-31607,1821
chr21:43350733-43351253	chr21	+	43350892	43351248	True	NM_199050,NR_027273	chr21,chr21	-,+	C2CD2,C21orf121	-4093,90864
chr21:43815214-43815552	chr21	+	43815282	43815574	True	NM_018961,NM_024022,NM_032405,NM_001001895,NR_027348	chr21,chr21,chr21,chr21,chr21	+,-,-,+,-	UBASH3A,TMPRSS3,TMPRSS3,UBASH3A,TMPRSS3	8444,676,676,8444,-6029
chr11:2399656-2400203	chr11	+	2399735	2400129	True	NM_004356,NM_014555	chr11,chr11	+,-	CD81,TRPM5	-1239,44196
chr1:154926849-154927133	chr1	+	154926902	154927158	True	NM_001826,NM_020524,NM_138300	chr1,chr1,chr1	+,-,-	CKS1B,PBXIP1,PYGO2	19959,1459,7150
chr9:114423489-114423785	chr9	+	114423513	114423751	True	NM_001017998,NR_034087,NM_001198664	chr9,chr9,chr9	+,-,+	GNG10,C9orf29,GNG10	99,-47680,99
chr14:68156938-68157439	chr14	+	68156962	68157376	True	NM_016026,NM_152443	chr14,chr14	-,+	RDH11,RDH12	5186,11226
chr1:16847292-16847540	chr1	+	16847301	16847581	True	NR_023386,NR_037446	chr1,chr1	-,+	CROCCP3,MIR3675	-28105,27827
chr1:16847292-16847540	chr1	-	17215818	17215868	False	NM_014675,NR_037446	chr1,chr1	+,-	CROCC,MIR3675	32576,-30302
chr10:101424727-101426010	chr10	+	101425047	101425912	True	NM_020354,NM_031212	chr10,chr10	+,-	ENTPD7,SLC25A28	-5836,-44826
chr11:45908330-45909385	chr11	+	45908508	45909380	True	NM_005456,NM_001080446	chr11,chr11	+,-	MAPK8IP1,C11orf94	-1357,19503
chr17:8190156-8190996	chr17	+	8190387	8191023	True	NM_201520,NM_001177802,NM_016492,NM_001177801	chr17,chr17,chr17,chr17	-,+,+,+	SLC25A35,RANGRF,RANGRF,RANGRF	7197,945,945,945
chr2:114349228-114349630	chr12	+	82126	82176	True	NR_028269,NR_026823	chr12,chr12	+,-	LOC100288778,FAM138D	5807,67286
chr3:160283871-160284621	chr3	+	160283962	160284663	True	NM_002268,NM_025047	chr3,chr3	-,+	KPNA4,ARL14	-586,110284
chr7:152125638-152126981	chr7	+	152125806	152126578	True	NR_002935,NM_170606	chr7,chr7	+,-	FABP5P3,MLL3	7401,6572
chr13:108917704-108918524	chr13	+	108917729	108918565	True	NM_006573,NM_001145645,NM_001098268	chr13,chr13,chr13	+,+,-	TNFSF13B,TNFSF13B,LIG4	3411,3411,-47013
chr2:85844903-85845236	chr2	+	85844908	85845064	True	NM_006590,NM_001013649	chr2,chr2	+,-	USP39,C2orf68	-1684,-5729
chr13:41883532-41884522	chr13	+	41883788	41884524	True	NM_001110798,NM_004294,NM_018527,NM_024561	chr13,chr13,chr13,chr13	+,-,+,+	NAA16,MTRF1,NAA16,NAA16	816,-46075,816,816
chr20:6193450-6194158	chr20	+	6193713	6194207	True	NM_001127458,NM_017671	chr20,chr20	+,-	CRLS1,FERMT1	-205866,-89522
chr15:43561766-43563021	chr15	+	43561876	43562724	True	NM_201631,NM_001012969,NM_004245	chr15,chr15,chr15	-,+,-	TGM5,ADAL,TGM5	-2821,60147,-2821
chr21:44781722-44781948	chr21	+	44781750	44781924	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	87979,65128
chrX:84632816-84633981	chrX	+	84633121	84633962	True	NM_021998,NM_024921	chrX,chrX	+,-	ZNF711,POF1B	-134182,849
chr2:54685049-54685622	chr2	+	54685172	54685671	True	NM_003128,NM_001003937	chr2,chr2	+,-	SPTBN1,TSPYL6	-1777,-201763
chr2:114342206-114344020	chr2	+	114342639	114343260	True	NR_026821,NR_024077,NR_024005	chr2,chr2,chr2	+,+,-	FAM138B,WASH2P,DDX11L2	-7732,-1461,15952
chr9:132384214-132385162	chr9	+	132384383	132385000	True	NM_199350,NM_014064	chr9,chr9	-,+	C9orf50,METTL11A	-1328,3434
chr4:88582667-88583445	chr4	+	88582882	88583442	True	NM_004407,NM_004684	chr4,chr4	+,-	DMP1,SPARCL1	-11488,-132227
chr2:114643709-114644050	chr2	+	114643879	114644077	True	NM_005721,NR_034130	chr2,chr2	+,-	ACTR3,LOC100499194	3459,93534
chrX:128976726-128977260	chrX	+	128976733	128977268	True	NM_001008222,NM_018990,NM_001166221,NM_016032	chrX,chrX,chrX,chrX	-,+,+,-	ZDHHC9,SASH3,UTP14A,ZDHHC9	343,-62905,62828,692
chr16:88878151-88878387	chr16	+	88878258	88878334	True	NM_000485,NM_001030018,NM_030928	chr16,chr16,chr16	-,-,+	APRT,APRT,CDT1	58,58,-8123
chr8:144911649-144911974	chr8	+	144911709	144911953	True	NM_078480,NR_033849,NM_014281,NM_001136033	chr8,chr8,chr8,chr8	-,+,-,-	PUF60,LOC100128338,PUF60,PUF60	-172,-95450,-172,-513
chr2:43036076-43036977	chr2	+	43036127	43036976	True	NM_020744,NM_012205	chr2,chr2	+,-	MTA3,HAAO	-240515,-16376
chr19:49927827-49928847	chr19	+	49928148	49928721	True	NM_001195256,NM_178449	chr19,chr19	+,-	LOC645971,PTH2	966,-1450
chr17:39681621-39682314	chr17	+	39681777	39682197	True	NM_002276,NM_005801,NM_002275	chr17,chr17,chr17	-,+,-	KRT19,EIF1,KRT15	2494,162929,-6507
chr8:41755201-41755990	chr8	+	41755246	41755969	True	NM_001134296,NM_001142446	chr8,chr8	+,-	AP3M2,ANK1	254494,-966
chr3:44790735-44792510	chr3	+	44791019	44792543	True	NM_020242,NM_020696	chr3,chr3	+,-	KIF15,KIAA1143	10665,10683
chr3:44790735-44792510	chr14	+	32737801	32738767	False	NR_027263,NM_004274	chr14,chr14	-,+	C14orf128,AKAP6	-191896,59711
chr9:35676940-35677725	chr9	+	35677190	35677706	True	NM_032818,NM_001216	chr9,chr9	-,+	C9orf100,CA9	-11912,-3343
chr2:191235676-191236141	chr2	+	191235699	191236079	True	NM_198047,NM_002194	chr2,chr2	-,+	HIBCH,INPP1	-50928,-27561
chr14:81868875-81870008	chr14	+	81868935	81870043	True	NM_033104,NM_000369	chr14,chr14	-,+	STON2,TSHR	-4008,-447117
chrX:48401146-48401783	chrX	+	48401277	48401618	True	NM_033518,NM_002536	chrX,chrX	-,+	SLC38A5,TBC1D25	-72633,-3260
chr19:18263016-18263250	chr19	+	18263173	18263249	True	NM_002866,NM_005027	chr19,chr19	-,+	RAB3A,PIK3R2	51675,766
chr2:61698845-61699126	chr2	+	61698849	61699139	True	NM_014709,NM_152392	chr2,chr2	-,+	USP34,AHSA2	-1000,-294345
chrX:110653150-110653560	chrX	+	110653182	110653604	True	NM_000555,NR_033974,NM_001195553,NM_178151,NM_178153,NM_178152	chrX,chrX,chrX,chrX,chrX,chrX	-,+,-,-,-,-	DCX,DKFZp686D0853,DCX,DCX,DCX,DCX	820,101285,1906,1865,1906,1906
chr20:33816840-33817425	chr20	+	33816848	33817443	True	NM_006690,NM_181468	chr20,chr20	+,-	MMP24,EIF6	-2366,55124
chr2:229442405-229443453	chr2	+	229442502	229443231	True	NM_178821,NM_030623	chr2,chr2	+,-	WDR69,SPHKAP	-706226,-396141
chr5:141703417-141703627	chr5	+	141703421	141703597	True	NM_030571,NM_001127496,NM_030964	chr5,chr5,chr5	+,-,-	NDFIP1,SPRY4,SPRY4	-215148,1073,1073
chr14:50233010-50233388	chr14	+	50233163	50233287	True	NM_001197331,NM_014315	chr14,chr14	-,+	POLE2,KLHDC2	-78065,1499
chr5:61711588-61712101	chr5	+	61711610	61711988	True	NM_014473,NM_016338,NM_001134779	chr5,chr5,chr5	-,+,+	DIMT1L,IPO11,IPO11	-11882,-3097,2722
chr10:71334225-71334446	chr10	+	71334375	71334485	True	NM_145306,NM_020999	chr10,chr10	+,-	C10orf35,NEUROG3	55517,-1165
chr3:190958636-190959058	chr3	+	190958663	190958960	True	NM_198184,NM_198152	chr3,chr3	+,-	OSTN,UTS2D	-28407,89422
chr11:71900409-71901668	chr11	+	71900531	71901695	True	NM_016725,NM_016724,NM_005169,NM_016729,NM_000802	chr11,chr11,chr11,chr11,chr11	+,+,-,+,+	FOLR1,FOLR1,PHOX2A,FOLR1,FOLR1	20,20,53575,1477,-31
chrY:59226895-59228451	chrY	+	59226917	59228227	True	NR_033715,NR_002179	chrY,chrY	+,-	VAMP7,TTTY17C	-13019,-31895997
chrY:59226895-59228451	chrX	+	155123911	155125221	False	NR_033715,NM_018196	chrX,chrX	+,-	VAMP7,TMLHE	-13019,-281289
chr8:106331521-106331867	chr8	+	106331565	106331781	True	NM_013437,NM_012082	chr8,chr8	-,+	LRP12,ZFPM2	-730313,-469
chr11:62783359-62785351	chr11	+	62783370	62785267	True	NM_001184736,NR_037193,NM_001184732,NM_001184733,NM_004254	chr11,chr11,chr11,chr11,chr11	-,+,-,-,-	SLC22A8,SLC3A2,SLC22A8,SLC22A8,SLC22A8	-53,-134250,-53,-53,-53
chr19:48282988-48283384	chr19	+	48283193	48283311	True	NM_198479,NM_003009	chr19,chr19	-,+	TPRX1,SEPW1	23600,-1402
chr1:2408975-2409189	chr1	+	2409012	2409224	True	NM_014638,NM_018216	chr1,chr1	+,-	PLCH2,PANK4	-1309,48861
chr9:35810976-35811282	chr9	+	35811033	35811311	True	NM_016446,NM_001039592,NM_032593,NM_172312	chr9,chr9,chr9,chr9	+,-,-,-	TMEM8B,SPAG8,HINT2,SPAG8	17910,998,3781,998
chr13:50069507-50069927	chr13	+	50069506	50069574	True	NM_001079670,NM_001040444,NM_001040443	chr13,chr13,chr13	-,+,+	CAB39L,PHF11,PHF11	-51285,953,226
chr22:31317825-31318738	chr22	+	31317828	31318455	True	NM_014941,NR_026920	chr22,chr22	-,+	MORC2,C22orf27	45782,-118
chr11:92703374-92704420	chr11	+	92703499	92704123	True	NM_152313,NM_005959	chr11,chr11	-,+	SLC36A4,MTNR1B	227032,-763
chr20:16725621-16725918	chr20	+	16725741	16725961	True	NM_001199866,NM_020157	chr20,chr20	-,+	KIF16B,OTOR	-171662,3041
chrX:77394109-77394897	chrX	+	77394364	77394869	True	NM_000291,NM_015975	chrX,chrX	+,-	PGK1,TAF9B	-34750,360
chr6:53013977-53014187	chr6	+	53014033	53014166	True	NM_012347,NM_003643	chr6,chr6	+,-	FBXO9,GCM1	-78326,-409
chrX:20006609-20007333	chrX	+	20006762	20007334	True	NR_024440,NM_001173456	chrX,chrX	-,+	LOC729609,PDHA1	626,-644807
chr17:15392283-15392878	chr17	+	15392368	15392926	True	NM_001204477,NM_001130842	chr17,chr17	-,+	CDRT4,ZNF286A	-21443,209964
chr3:112695380-112696849	chr3	+	112695658	112696862	True	NM_138806,NM_138939,NM_170780,NM_138940,NM_014170	chr3,chr3,chr3,chr3,chr3	-,-,-,-,+	CD200R1,CD200R1,CD200R1,CD200R1,GTPBP8	-1721,-1721,-1721,-1721,12937
chr14:105288756-105289776	chr14	+	105288808	105289772	True	NR_024396,NM_001014432	chr14,chr14	+,-	MGC23270,AKT1	-1321,-26728
chr7:134255268-134256878	chr7	+	134255628	134256912	True	NM_001628,NM_001080538	chr7,chr7	-,+	AKR1B1,AKR1B15	-111740,-21830
chr19:11643421-11644233	chr19	+	11643724	11644023	True	NM_001142464,NM_001142465,NM_016581,NR_024551,NM_001299	chr19,chr19,chr19,chr19,chr19	-,-,-,-,+	ECSIT,ECSIT,ECSIT,ECSIT,CNN1	-3737,-3737,-3737,-4044,5555
chr10:5540877-5541165	chr10	+	5540963	5541157	True	NM_017422,NM_005185	chr10,chr10	-,+	CALML5,CALML3	426,25766
chr6:5243299-5243503	chr6	+	5243305	5243413	True	NM_006567,NM_001164841	chr6,chr6	+,-	FARS2,LYRM4	18170,17809
chr5:36610918-36612541	chr5	+	36610994	36612142	True	NM_001166695,NM_001166696,NM_004172,NM_145000	chr5,chr5,chr5,chr5	+,+,+,-	SLC1A3,SLC1A3,SLC1A3,RANBP3L	-2626,-4600,-4600,-308983
chr12:49176080-49176617	chr12	+	49176212	49176634	True	NM_000725,NM_020983,NM_015270	chr12,chr12,chr12	+,-,-	CACNB3,ADCY6,ADCY6	35877,6236,1293
chrX:52927644-52928666	chrX	+	52927666	52928618	True	NM_014138,NM_133179,NM_001099684	chrX,chrX,chrX	+,-,+	FAM156A,XAGE3,FAM156B	63,-30547,-38
chrX:52927644-52928666	chrX	-	52985419	52986371	False	NM_014138,NM_001099684	chrX,chrX	-,-	FAM156A,FAM156B	-63,38
chr11:14537324-14537610	chr11	+	14537380	14537492	True	NM_001143937,NM_002786,NM_000922	chr11,chr11,chr11	-,-,+	PSMA1,PSMA1,PDE3B	4549,4549,127776
chr14:51710394-51710610	chr14	+	51710394	51710635	True	NM_052978,NM_030755	chr14,chr14	-,+	TRIM9,TMX1	-147972,-3562
chr7:119412279-119412881	chr7	+	119412370	119412901	True	NM_012281,NM_012338	chr7,chr7	+,-	KCND2,TSPAN12	500820,1085326
chr7:27155714-27155950	chr7	+	27155823	27155895	True	NM_030661,NR_002795	chr7,chr7	-,+	HOXA3,HOXA11-AS1	3369,69131
chr16:30101105-30102137	chr16	+	30101336	30102136	True	NM_002720,NM_004608,NM_001145524,NM_031477	chr16,chr16,chr16,chr16	+,-,-,-	PPP4C,TBX6,YPEL3,YPEL3	-14003,1119,5451,5435
chr8:29117950-29118292	chr8	+	29117950	29118095	True	NM_015254,NM_024567	chr8,chr8	-,+	KIF13B,HMBOX1	2570,-369783
chr3:151162254-151163281	chr3	+	151162690	151163318	True	NM_001178146,NR_031678,NM_001178145	chr3,chr3,chr3	-,+,-	IGSF10,MIR548H2,IGSF10	-4112,184001,-4112
chr1:201488956-201489162	chr1	+	201489059	201489210	True	NR_026667,NM_004078	chr1,chr1	+,-	RPS10P7,CSRP1	-83,-12672
chr4:76439655-76439898	chr4	+	76439688	76439892	True	NM_001009922,NR_037913,NR_037914,NM_001008925,NM_015436,NM_144721	chr4,chr4,chr4,chr4,chr4,chr4	-,-,-,-,-,+	RCHY1,RCHY1,RCHY1,RCHY1,RCHY1,THAP6	-48,-48,-48,-48,-48,-85
chr14:35870674-35871300	chr14	+	35870769	35871331	True	NM_002791,NM_020529	chr14,chr14	+,-	PSMA6,NFKBIA	-109251,2679
chr8:37964322-37966255	chr8	+	37964494	37965840	True	NM_004674,NM_000349,NM_001105214	chr8,chr8,chr8	+,-,+	ASH2L,STAR,ASH2L	-1534,42810,-1196
chrX:44598122-44599370	chrX	+	44598584	44598644	True	NM_022076,NM_173794	chrX,chrX	+,-	DUSP21,FUNDC1	104604,-196363
chr3:124930385-124930726	chr3	+	124930387	124930763	True	NM_001195483,NR_033437,NM_024628	chr3,chr3,chr3	-,+,-	SLC12A8,UMPS,SLC12A8	-144,-481225,896
chr6:14971658-14971889	chr6	+	14971788	14971899	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	274627,691445
chr19:3556132-3556333	chr19	+	3556139	3556301	True	NM_001042680,NM_021731,NM_006339,NM_174983	chr19,chr19,chr19,chr19	-,-,+,-	C19orf28,C19orf28,HMG20B,C19orf28	1320,1320,16641,1320
chr1:16301523-16302052	chr1	+	16301581	16301997	True	NM_003443,NM_178840	chr1,chr1	-,+	ZBTB17,C1orf64	680,28733
chr1:37921369-37921605	chr1	+	37921368	37921632	True	NM_022756,NM_025079	chr1,chr1	-,+	MEAF6,ZC3H12A	58788,18486
chr12:47612815-47614045	chr12	+	47613157	47613437	True	NM_138371,NR_026544	chr12,chr12	+,-	FAM113B,LOC100233209	-3157,-2931
chr1:6319772-6320053	chr1	+	6319775	6320069	True	NM_207370,NM_001024598	chr1,chr1	-,+	GPR153,HES3	1016,-15574
chr6:108486843-108487356	chr6	+	108486868	108487124	True	NM_003269,NM_014028	chr6,chr6	+,-	NR2E1,OSTM1	90,-90927
chr15:74723289-74724684	chr15	+	74723464	74724434	True	NM_001146029,NM_006465,NM_001146030,NM_003612	chr15,chr15,chr15,chr15	-,+,-,-	SEMA7A,ARID3B,SEMA7A,SEMA7A	1915,109113,1617,1915
chr17:45906552-45907222	chr17	+	45906750	45906983	True	NM_145798,NM_145255,NR_037575,NM_033413,NM_148887	chr17,chr17,chr17,chr17,chr17	-,-,-,+,-	OSBPL7,MRPL10,MRPL10,LRRC46,MRPL10	-7603,1975,1975,2009,1975
chr20:34743943-34744804	chr20	+	34744200	34744556	True	NM_012156,NR_027451	chr20,chr20	+,-	EPB41L1,LOC647979	-1589,-105318
chr5:179634800-179635085	chr5	+	179634894	179635078	True	NM_015455,NM_175062	chr5,chr5	+,-	CNOT6,RASGEF1C	286338,1102
chr22:25159358-25159874	chr22	+	25159557	25159893	True	NM_001008496,NR_001283	chr22,chr22	-,+	PIWIL3,TOP1P2	10840,574
chr15:74612175-74612533	chr15	+	74612195	74612556	True	NM_001099773,NM_182791	chr15,chr15	-,+	CYP11A1,CCDC33	46047,-1346
chr1:244512294-244513186	chr1	+	244512394	244513112	True	NM_001012970,NM_001126	chr1,chr1	+,-	C1orf100,ADSS	2824,102374
chr2:114384479-114384753	chr22	-	51222358	51222427	False	NM_001003789,NM_001130919,NM_001130920,NM_001130921,NM_001130922,NM_001130923	chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,-,-	RABL2B,RABL2B,RABL2B,RABL2B,RABL2B,RABL2B	-271,-271,-271,-271,-271,-271
chr2:114384479-114384753	chr2	+	114384479	114384669	True	NM_007082,NR_000029,NM_013412,NR_024529,NR_024528,NR_024530,NR_024531	chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,-,+,-,-,-,-	RABL2A,RPL23AP7,RABL2A,RPL23AP7,RPL23AP7,RPL23AP7,RPL23AP7	147,96,147,96,96,96,96
chr11:129872485-129873197	chr11	+	129872503	129872999	True	NM_199437,NR_024233,NM_020228	chr11,chr11,chr11	-,+,-	PRDM10,NCRNA00167,PRDM10	-29,-35,-29
chr14:105555699-105556416	chr14	+	105555905	105556351	True	NM_174891,NM_013345	chr14,chr14	+,-	C14orf79,GPR132	-103340,-24151
chr16:30033096-30033846	chr16	+	30033234	30033669	True	NM_031478,NM_001109660,NM_001109659	chr16,chr16,chr16	-,+,+	FAM57B,C16orf92,C16orf92	8569,985,985
chr6:30861703-30862395	chr6_qbl_hap6	+	2155037	2155307	False	NM_001202521,NM_001202522,NM_001202523,NM_013994,NM_013993,NM_205854	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	+,+,+,+,+,-	DDR1,DDR1,DDR1,DDR1,DDR1,SFTA2	-5636,-5636,-9344,-5636,-9774,37666
chr6:30861703-30862395	chr6_dbb_hap3	+	2156166	2156436	False	NM_001202521,NM_001202522,NM_001202523,NM_013994,NM_013993,NM_205854	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	+,+,+,+,+,-	DDR1,DDR1,DDR1,DDR1,DDR1,SFTA2	-5650,-5650,-9358,-5650,-9788,37676
chr6:30861703-30862395	chr6_mann_hap4	+	2210129	2210399	False	NM_001202521,NM_001202522,NM_001202523,NM_013994,NM_013993,NM_205854	chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4	+,+,+,+,+,-	DDR1,DDR1,DDR1,DDR1,DDR1,SFTA2	-5630,-5630,-9338,-5630,-9768,37684
chr6:30861703-30862395	chr6	+	30861710	30862318	True	NM_013993,NM_001202521,NM_001202522,NM_001202523,NM_013994,NM_001954,NM_205854	chr6,chr6,chr6,chr6,chr6,chr6,chr6	+,+,+,+,+,+,-	DDR1,DDR1,DDR1,DDR1,DDR1,DDR1,SFTA2	-9434,-5296,-5296,-9004,-5296,-9900,37684
chr6:30861703-30862395	chr6_cox_hap2	+	2374148	2374418	False	NM_001202521,NM_001202522,NM_001202523,NM_013994,NM_013993,NM_205854	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,+,+,+,+,-	DDR1,DDR1,DDR1,DDR1,DDR1,SFTA2	-5636,-5636,-9344,-5636,-9774,37507
chr6:36514351-36514611	chr6	+	36514359	36514647	True	NM_003017,NM_007271	chr6,chr6	+,-	SRSF3,STK38	47442,650
chr8:124665874-124666137	chr8	+	124665926	124666117	True	NM_001081675,NM_144963	chr8,chr8	-,+	KLHL38,FAM91A1	-736,114764
chr8:143806667-143807247	chr8	+	143806707	143807155	True	NM_016647,NM_020427	chr8,chr8	+,-	C8orf55,SLURP1	1465,16724
chr17:9863007-9863903	chr17	+	9863158	9863852	True	NM_003644,NM_004246	chr17,chr17	-,+	GAS7,GLP2R	-392,-133828
chr10:7831070-7831536	chr10	+	7831096	7831584	True	NM_005174,NM_012311,NM_001001973	chr10,chr10,chr10	+,-,+	ATP5C1,KIN,ATP5C1	-1054,-1152,-1054
chr7:112758952-112759658	chr7	+	112758956	112759634	True	NR_024412,NM_182597,NR_015442	chr7,chr7,chr7	-,+,-	LOC401397,C7orf53,LOC401397	-319,-637941,-319
chr17:42347138-42347391	chr17	+	42347200	42347306	True	NM_001144826,NM_000342	chr17,chr17	+,-	RUNDC3A,SLC4A1	38620,-1698
chr19:51879086-51879678	chr19	+	51879272	51879400	True	NM_001985,NM_152353,NR_033235,NM_005601	chr19,chr19,chr19,chr19	-,-,+,-	ETFB,CLDND2,LOC100129083,NKG7	-9600,-7015,39759,-3312
chr3:42200887-42201647	chr3	+	42200904	42201480	True	NM_014965,NM_001174138	chr3,chr3	+,-	TRAK1,CCK	180,104009
chr3:129802840-129803892	chr3	+	129803155	129803671	True	NM_001136152,NR_024252	chr3,chr3	+,-	ALG1L2,LOC729375	-2538,26655
chr17:7606595-7607284	chr17	+	7606659	7607217	True	NM_001126114,NM_001406	chr17,chr17	-,+	TP53,EFNB3	-15796,1302
chr8:96283946-96284549	chr8	+	96284148	96284223	True	NM_177965,NM_024613	chr8,chr8	-,+	C8orf37,PLEKHF2	-2686,-138251
chrY:20134417-20134633	chrY	+	20134569	20134650	True	NM_004825,NM_001001722	chrY,chrY	+,+	CDY2A,CDY2B	3016,3017
chrY:20134417-20134633	chrY	-	19995116	19995197	False	NM_004825,NM_001001722	chrY,chrY	-,-	CDY2A,CDY2B	-3016,-3017
chrY:20134417-20134633	chrY	+	27765181	27765262	False	NM_004680,NR_002179,NM_001003895,NM_001003894,NM_170723	chrY,chrY,chrY,chrY,chrY	+,-,+,+,+	CDY1,TTTY17C,CDY1B,CDY1B,CDY1	3001,-434261,3001,3001,3001
chrY:20134417-20134633	chrY	-	26197162	26197243	False	NM_004680,NM_001003895,NM_001003894,NR_001526,NM_170723	chrY,chrY,chrY,chrY,chrY	-,-,-,+,-	CDY1,CDY1B,CDY1B,TTTY17A,CDY1	-3001,-3001,-3001,434235,-3001
chr15:88117952-88119832	chr15	+	88118355	88119808	True	NM_001012338,NR_026869	chr15,chr15	-,+	NTRK3,NCRNA00052	679912,351
chr18:10624441-10625313	chr18	+	10624485	10625254	True	NM_003826,NM_022068	chr18,chr18	+,-	NAPG,FAM38B	-98663,523566
chr18:10624441-10625313	chr18	-	12211114	12211192	False	NM_006796,NM_001279	chr18,chr18	-,+	AFG3L2,CIDEA	166133,43125
chr2:219697365-219698841	chr2	+	219697766	219698854	True	NM_017431,NM_006522	chr2,chr2	-,+	PRKAG3,WNT6	-1254,25691
chrX:33266249-33267455	chrX	+	33266734	33267259	True	NM_004006,NM_152631	chrX,chrX	-,+	DMD,FAM47B	-37061,1693653
chr15:45322327-45323370	chr15	+	45322423	45323203	True	NR_034039,NM_003104,NM_014080	chr15,chr15,chr15	+,+,-	SORD,SORD,DUOX2	-7182,-7182,83218
chrX:149107498-149107877	chrX	+	149107608	149107678	True	NR_027456,NM_001013845	chrX,chrX	+,-	LOC100272228,CXorf40B	-893,-892
chr11:65150753-65151083	chr11	+	65150755	65150952	True	NM_031904,NM_182556,NM_001077241	chr11,chr11,chr11	+,-,-	FRMD8,SLC25A45,SLC25A45	3088,-613,-613
chr6:94113471-94115451	chr6	+	94113514	94115487	True	NR_015362,NM_004440	chr6,chr6	+,-	TSG1,EPHA7	301313,13863
chr11:74955115-74955347	chr11	+	74955118	74955290	True	NM_001195528,NR_029891	chr11,chr11	+,-	LOC441617,MIR326	-3219,90990
chrX:80064383-80064643	chrX	+	80064386	80064678	True	NM_152630,NM_153252	chrX,chrX	+,-	FAM46D,BRWD3	-388491,605
chr1:220864757-220865271	chr1	+	220864856	220865202	True	NM_024709,NM_012414	chr1,chr1	+,-	C1orf115,RAB3GAP2	-1279,-419013
chr17:76338707-76339370	chr17	+	76338714	76339364	True	NM_003955,NM_024419	chr17,chr17	-,+	SOCS3,PGS1	16844,35370
chrX:102630387-102630607	chrX	+	102630398	102630533	True	NM_206915,NM_206917,NM_014380,NM_032621	chrX,chrX,chrX,chrX	+,+,+,-	NGFRAP1,NGFRAP1,NGFRAP1,BEX2	734,734,1575,-64424
chrX:51486446-51486654	chrX	+	51486496	51486622	True	NR_033773,NM_018094	chrX,chrX	-,+	LOC441495,GSPT2	-61049,-66
chr2:106048368-106049932	chr2	+	106048503	106049549	True	NM_024093,NM_201557	chr2,chr2	+,-	C2orf49,FHL2	-94541,5731
chr6:31431111-31432600	chr6	+	31431276	31432115	True	NR_002812,NM_006674,NR_003140	chr6,chr6,chr6	+,+,-	HCG26,HCP5,SNORD117	6890,-370,72161
chr6:31431111-31432600	chr6_ssto_hap7	+	2762046	2762885	False	NR_002812,NM_006674,NR_003140	chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7	+,+,-	HCG26,HCP5,SNORD117	6886,-370,72196
chr6:31431111-31432600	chr6_cox_hap2	+	2940930	2941769	False	NR_002812,NM_006674,NR_003140	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,+,-	HCG26,HCP5,SNORD117	6890,-370,72169
chr8:139504205-139505090	chr8	+	139504221	139505079	True	NM_015912,NM_017444	chr8,chr8	-,+	FAM135B,CHRAC1	4036,2016321
chr15:91566681-91568293	chr15	+	91566935	91568289	True	NM_018668,NM_033544	chr15,chr15	-,+	VPS33B,RCCD1	-1102,-68884
chr19:17393095-17393363	chr19	+	17393242	17393386	True	NM_152363,NM_031941	chr19,chr19	+,-	ANKLE1,USHBP1	-839,-17698
chr12:57635741-57636131	chr12	+	57635804	57636088	True	NM_145064,NM_020142,NM_001166357	chr12,chr12,chr12	-,-,+	STAC3,NDUFA4L2,SHMT2	8931,-1329,-11712
chr11:62439702-62440106	chr11	+	62439789	62439901	True	NM_015853,NR_004390,NM_001043229,NM_001085372,NM_024099	chr11,chr11,chr11,chr11,chr11	-,+,+,+,-	UBXN1,SNORA57,METTL12,C11orf83,C11orf48	6676,-6946,-7061,-714,-548
chr1:171233905-171234245	chr1	+	171234051	171234197	True	NM_002021,NR_031627	chr1,chr1	+,-	FMO1,MIR1295	-16439,-163104
chr3:49939857-49940115	chr3	+	49939878	49940164	True	NM_001167582,NM_002447	chr3,chr3	+,-	RBM6,MST1R	37312,1192
chr1:205913420-205914189	chr1	+	205913574	205914234	True	NM_052934,NM_001123168,NM_134325	chr1,chr1,chr1	-,+,-	SLC26A9,FAM72A,SLC26A9	-986,224676,-986
chr5:140207813-140208075	chr5	+	140207862	140208124	True	NM_031849,NM_002109,NM_018908,NM_018909,NM_031848,NM_031501,NM_018910,NM_031852	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,-,+,+,+,+,+,+	PCDHA6,HARS,PCDHA5,PCDHA6,PCDHA6,PCDHA5,PCDHA7,PCDHA7	-263,-136891,-6552,-263,-263,-6552,5844,5844
chr1:24070711-24071034	chr1	+	24070737	24070808	True	NM_003198,NM_001127621	chr1,chr1	+,-	TCEB3,GALE	-933,55305
chr1:147231187-147232593	chr1	+	147231415	147232539	True	NM_005267,NM_181703	chr1,chr1	+,-	GJA8,GJA5	142406,225
chr10:32633568-32635045	chr10	+	32633803	32635079	True	NM_025209,NM_001026383	chr10,chr10	-,+	EPC1,CCDC7	1084,99961
chr9:88712735-88713770	chr9	+	88712875	88713687	True	NM_177937,NM_024635,NM_016548	chr9,chr9,chr9	-,+,-	GOLM1,NAA35,GOLM1	1479,-156870,873
chr1:151042874-151043228	chr1	+	151042895	151043249	True	NM_144618,NM_020239	chr1,chr1	+,-	GABPB2,CDC42SE1	-16,-10770
chr8:126008694-126010243	chr8	+	126008954	126010079	True	NM_003129,NM_014846	chr8,chr8	+,-	SQLE,KIAA0196	640,94032
chrY:22918262-22918566	chrY	+	22918273	22918603	True	NM_001039567,NR_001542	chrY,chrY	+,-	RPS4Y2,TTTY10	-370,-237159
chr17:8857972-8858540	chr17	+	8858272	8858584	True	NM_004822,NM_001142633	chr17,chr17	+,-	NTN1,PIK3R5	66274,10490
chr2:238599302-238599698	chr2	+	238599419	238599659	True	NM_001137551,NM_001137552,NM_001137553,NM_004735,NR_033308	chr2,chr2,chr2,chr2,chr2	+,+,+,+,-	LRRFIP1,LRRFIP1,LRRFIP1,LRRFIP1,RAB17	1147,1147,1147,1147,-99650
chr21:33759650-33760398	chr21	+	33759816	33760375	True	NM_014825,NR_026845	chr21,chr21	-,+	URB1,C21orf119	4987,5066
chr11:5987458-5988904	chr11	+	5987775	5988831	True	NM_001146033,NM_001003443	chr11,chr11	-,+	OR56A5,OR56A3	943,-19263
chrX:52929259-52929715	chrX	+	52929506	52929704	True	NM_014138,NM_133179,NM_001099684	chrX,chrX,chrX	+,-,+	FAM156A,XAGE3,FAM156B	-1695,-32387,-1148
chrX:52929259-52929715	chrX	-	52984333	52984531	False	NM_014138,NM_001099684	chrX,chrX	-,-	FAM156A,FAM156B	1695,1148
chr10:5934988-5936037	chr10	+	5935416	5935990	True	NM_019046,NM_001009941,NM_032807,NM_001009943,NM_178150	chr10,chr10,chr10,chr10,chr10	-,-,+,-,+	ANKRD16,ANKRD16,FBXO18,ANKRD16,FBXO18	-3556,-3556,358,-3556,-3253
chr18:5243223-5243787	chr18	+	5243431	5243577	True	NR_015389,NR_026849	chr18,chr18	+,-	LOC339290,C18orf18	-5394,-5403
chr10:98033825-98035513	chr10	+	98034033	98035551	True	NM_001017520,NM_001114094,NM_013314	chr10,chr10,chr10	+,-,-	DNTT,BLNK,BLNK	28533,-2700,-2700
chr11:11647805-11648167	chr11	+	11647808	11648156	True	NM_198516,NM_017944	chr11,chr11	-,+	GALNTL4,USP47	-4247,214813
chr3:169636856-169637280	chr3	+	169637009	169637316	True	NR_027622,NM_182610	chr3,chr3	-,+	LOC100128164,SAMD7	47257,-7580
chr8:109255712-109257552	chr8	+	109256144	109257289	True	NM_001568,NM_014673	chr8,chr8	-,+	EIF3E,TTC35	3720,198563
chr3:195717605-195718424	chr3	+	195717755	195718456	True	NR_034088,NR_003264	chr3,chr3	+,-	LOC401109,SDHAP1	151050,-605
chr3:195717605-195718424	chr3	+	197355720	197356039	False	NR_003266,NM_001011537	chr3,chr3	-,+	LOC220729,FYTTD1	-968,120384
chr3:195717605-195718424	chr3	-	195383647	195384342	False	NM_001647,NR_003265	chr3,chr3	-,+	APOD,SDHAP2	-72571,567
chr11:5663492-5664059	chr11	+	5663527	5664025	True	NM_033034,NR_002777	chr11,chr11	-,+	TRIM5,TRIM78P	42376,386
chr15:68872135-68872691	chr15	+	68872477	68872567	True	NM_006091,NM_001004439	chr15,chr15	+,-	CORO2B,ITGA11	-956,-147985
chr4:100205897-100207069	chr4	+	100205925	100206907	True	NM_000667,NR_037884	chr4,chr4	-,+	ADH1A,LOC100507053	5334,-195968
chr6:26537546-26538330	chr6	+	26537647	26538247	True	NM_006353,NM_024639	chr6,chr6	+,-	HMGN4,ZNF322A	324,121766
chr7:140105762-140106776	chr7	+	140106127	140106678	True	NM_001008749,NM_032295,NM_207113	chr7,chr7,chr7	+,-,-	RAB19,SLC37A3,SLC37A3	-2335,-7816,-7816
chr11:117104137-117104855	chr11	+	117104228	117104835	True	NM_004716,NM_207343,NM_001077239	chr11,chr11,chr11	-,+,+	PCSK7,RNF214,RNF214	-1417,-883,-835
chr2:33950665-33952469	chr2	+	33951150	33952185	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-212265,1149
chr20:61439145-61439702	chr20	+	61439173	61439701	True	NM_007346,NM_001853,NM_006602	chr20,chr20,chr20	+,+,-	OGFR,COL9A3,TCFL5	-3047,8712,53464
chr17:41437144-41437759	chr17	+	41437160	41437749	True	NR_027412,NM_001661	chr17,chr17	-,+	LOC100130581,ARL4D	28568,38603
chr6:142477602-142478155	chr6	+	142477629	142478053	True	NM_016485,NM_002511	chr6,chr6	+,-	VTA1,NMBR	-9280,-67693
chr19:1351371-1351764	chr19	+	1351445	1351779	True	NR_024247,NM_000156,NM_032853	chr19,chr19,chr19	+,-,+	MUM1,GAMT,MUM1	4543,49823,3196
chr8:66560410-66560872	chr8	+	66560618	66560927	True	NM_018120,NM_014637,NM_001145839	chr8,chr8,chr8	-,+,+	ARMC1,MTFR1,MTFR1	-14166,-3792,-3792
chr9:139623515-139623856	chr9	+	139623555	139623847	True	NR_003672,NR_024543,NR_024542,NM_152421,NR_002975,NR_033913,NR_002958	chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,-,-,+,-,+,-	SNHG7,SNHG7,SNHG7,FAM69B,SNORA43,LOC100128593,SNORA17	-919,-919,-919,-16583,-2866,16765,-2224
chr1:177108940-177110206	chr1	+	177108943	177109909	True	NM_004319,NM_021165	chr1,chr1	-,+	ASTN1,FAM5B	24167,30723
chr19:18904040-18904704	chr19	+	18904128	18904714	True	NM_000095,NM_002911	chr19,chr19	-,+	COMP,UPF1	-2014,38029
chr19:55124310-55125569	chr19	+	55124551	55125584	True	NM_006669,NM_145057	chr19,chr19	+,-	LILRB1,CDC42EP5	3044,-140129
chr22:35854561-35854768	chr22	+	35854610	35854755	True	NM_005368,NM_006739	chr22,chr22	-,+	MB,MCM5	158680,-58546
chr17:37358322-37358579	chr17	+	37358343	37358605	True	NM_199248,NM_000981,NM_000723,NM_199247	chr17,chr17,chr17,chr17	-,+,-,-	CACNB1,RPL19,CACNB1,CACNB1	-4442,-1864,-4442,-4442
chr7:131449450-131450819	chr7	+	131449473	131450811	True	NM_005397,NM_013255	chr7,chr7	-,+	PODXL,MKLN1	-208097,-436929
chr18:19190227-19190735	chr18	+	19190231	19190747	True	NM_006938,NM_052911	chr18,chr18	+,-	SNRPD1,ESCO1	1512,-9538
chr6:121753704-121755387	chr6	+	121753703	121755189	True	NM_000165,NM_152730	chr6,chr6	+,-	GJA1,C6orf170	1555,-98059
chr22:22222053-22222285	chr22	+	22222055	22222331	True	NM_148176,NM_002745,NM_138957	chr22,chr22,chr22	+,-,-	PPIL2,MAPK1,MAPK1	-201833,-85,-85
chr2:20731855-20733324	chr2	+	20731968	20733094	True	NM_022460,NM_004040	chr2,chr2	-,+	HS1BP3,RHOB	117820,-85188
chr3:48484503-48485771	chr3	+	48485005	48485669	True	NM_130384,NM_024661,NM_015933,NM_032166	chr3,chr3,chr3,chr3	+,-,+,+	ATRIP,CCDC51,CCDC72,ATRIP	2548,-3476,-3370,2548
chr6:122948310-122949341	chr6	+	122948408	122948958	True	NM_020755,NM_181795	chr6,chr6	-,+	SERINC1,PKIB	-155456,-17089
chr13:111768492-111768726	chr13	+	111768517	111768721	True	NM_001113512,NM_145735,NM_001113511,NM_017664	chr13,chr13,chr13,chr13	+,+,+,-	ARHGEF7,ARHGEF7,ARHGEF7,ANKRD10	-944,-944,-944,-201101
chr15:59981570-59982079	chr15	+	59981704	59981988	True	NM_004751,NM_004330	chr15,chr15	+,-	GCNT3,BNIP2	-77773,-62
chr1:226187635-226188268	chr1	+	226187666	226188134	True	NM_152608,NM_002107	chr1,chr1	-,+	C1orf55,H3F3A	-600,62273
chr4:21632203-21633927	chr4	+	21632209	21633587	True	NM_001035003,NM_145048	chr4,chr4	-,+	KCNIP4,PACRGL	65781,-930225
chr10:104192773-104193361	chr10	+	104193341	104193405	True	NM_024040,NR_030169	chr10,chr10	-,+	CUEDC2,MIR146B	-918,2863
chr22:23869906-23870126	chr22	+	23869905	23869981	True	NM_153615,NM_020070	chr22,chr22	+,-	RGL4,IGLL1	163066,52564
chr16:2849997-2851880	chr16	+	2850025	2851185	True	NM_152891,NM_001135086	chr16,chr16	-,+	PRSS33,PRSS41	-13317,-1592
chr16:79805539-79806378	chr16	+	79805548	79806361	True	NM_005360,NM_130897	chr16,chr16	-,+	MAF,DYNLRB2	-170926,768492
chr1:3540562-3540840	chr1	+	3540608	3540810	True	NM_001409,NM_182752	chr1,chr1	-,+	MEGF6,TPRG1L	-12549,745
chr8:19800400-19801580	chr8	+	19800449	19801247	True	NM_001135691,NM_000237	chr8,chr8	-,+	SLC18A1,LPL	239532,-3925
chr1:186343749-186344295	chr1	+	186343750	186344120	True	NM_017847,NM_003292,NM_001164246,NM_001164245	chr1,chr1,chr1,chr1	+,-,+,+	C1orf27,TPR,C1orf27,C1orf27	769,387,769,769
chr6:125341780-125342503	chr6	+	125341780	125342376	True	NR_026876,NM_152553	chr6,chr6	-,+	STL,RNF217	-57607,-37317
chr19:1814147-1814514	chr19	+	1814386	1814546	True	NR_031730,NR_034114,NM_138813,NM_001178002	chr19,chr19,chr19,chr19	-,+,-,-	MIR1909,LOC100288123,ATP8B3,ATP8B3	1741,7541,-2116,-2187
chr3:14859911-14860727	chr3	+	14859918	14860708	True	NM_152536,NM_022497	chr3,chr3	+,-	FGD5,MRPS25	-30,246158
chr7:1597671-1597987	chr7	+	1597670	1597992	True	NR_021487,NM_001097620	chr7,chr7	+,-	KIAA1908,TMEM184A	11716,-1604
chr3:135684924-135685208	chr3	+	135685024	135685228	True	NM_002718,NM_001145417,NM_001190447	chr3,chr3,chr3	+,-,+	PPP2R3A,MSL2,PPP2R3A	-560,228132,-560
chr3:9594129-9594368	chr3	+	9594226	9594342	True	NM_198560,NM_001077525	chr3,chr3	-,+	LHFPL4,MTMR14	1194,96774
chr2:88743982-88745196	chr2	+	88744143	88745242	True	NM_152670,NM_001135649	chr2,chr2	+,-	C2orf51,FOXI3	78926,6861
chr18:44103546-44104460	chr18	+	44103558	44104456	True	NM_001173129,NM_152470,NM_001145473	chr18,chr18,chr18	-,+,-	LOXHD1,RNF165,LOXHD1	-4509,-189432,-4509
chr9:116331404-116333056	chr9	+	116331442	116332675	True	NM_017443,NM_134427	chr9,chr9	-,+	POLE3,RGS3	-158413,-4132
chr22:35516227-35517899	chr22	+	35516392	35517770	True	NM_001008494,NM_005368	chr22,chr22	+,-	ISX,MB	-54313,495664
chr8:61586609-61587366	chr8	+	61586653	61587261	True	NR_034003,NM_017780	chr8,chr8	-,+	LOC100130298,CHD7	293104,4077
chrY:14507156-14507747	chrY	+	14507190	14507515	True	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	266782,25933
chr2:96874479-96874773	chr2	+	96874479	96874787	True	NM_020151,NM_001037228	chr2,chr2	-,+	STARD7,LOC285033	-12,31189
chr12:104533388-104533833	chr12	+	104533479	104533668	True	NM_006166,NM_013320	chr12,chr12	-,+	NFYB,HCFC2	-1439,-75302
chr1:201252358-201252569	chr1	+	201252501	201252583	True	NM_000364,NM_000299,NM_001005337	chr1,chr1,chr1	-,+,+	TNNT2,PKP1,PKP1	94272,-4,-4
chr10:134213162-134213552	chr10	+	134213217	134213477	True	NM_001098637,NM_138499,NM_173575	chr10,chr10,chr10	+,+,-	PWWP2B,PWWP2B,STK32C	-2566,-2566,-91740
chr11:63452822-63453662	chr11	+	63453169	63453610	True	NM_201428,NM_201429,NM_006054,NM_015459,NM_201430	chr11,chr11,chr11,chr11,chr11	+,+,+,-,+	RTN3,RTN3,RTN3,ATL3,RTN3	-4299,-4299,-4299,-14086,-4299
chr16:2247733-2248227	chr16	+	2247778	2248060	True	NM_001199174,NM_001199175,NM_020764,NM_001199173,NM_022372	chr16,chr16,chr16,chr16,chr16	+,+,-,+,+	MLST8,MLST8,CASKIN1,MLST8,MLST8	7671,7117,-1313,7117,7117
chr16:30798774-30798974	chr16	+	30798880	30799004	True	NM_001080417,NM_014771	chr16,chr16	-,+	ZNF629,RNF40	-357,-25301
chr15:34876748-34877380	chr15	+	34876793	34877367	True	NM_175741,NR_027410	chr15,chr15	+,-	C15orf55,GOLGA8B	-238778,-1022
chr1:159158033-159158235	chr1	+	159158131	159158229	True	NM_002036,NR_037870	chr1,chr1	+,-	DARC,LOC100131825	15573,14033
chr11:77851451-77853032	chr11	+	77851880	77852894	True	NM_024079,NM_001007027,NM_020798	chr11,chr11,chr11	-,-,+	ALG8,ALG8,USP35	-1181,-1181,46963
chr11:63449848-63451513	chr11	+	63449852	63451346	True	NM_201428,NM_201429,NM_006054,NM_015459,NM_201430	chr11,chr11,chr11,chr11,chr11	+,+,+,-,+	RTN3,RTN3,RTN3,ATL3,RTN3	-981,-981,-981,-10769,-981
chr12:10083682-10084740	chr12	+	10083681	10084753	True	NM_138337,NM_001130711	chr12,chr12	+,-	CLEC12A,CLEC2A	39254,278
chr8:38382148-38383122	chr8	+	38382267	38382855	True	NM_207412,NM_001199660	chr8,chr8	-,+	C8orf86,LETM2	3380,-137684
chr3:38070369-38070603	chr3	+	38070423	38070515	True	NM_006225,NR_024071,NM_001130964,NM_007335	chr3,chr3,chr3,chr3	-,-,-,+	PLCD1,PLCD1,PLCD1,DLEC1	689,-4145,-4145,10180
chr6:26158706-26159111	chr6	+	26158765	26159135	True	NM_138720,NM_003539,NM_005321,NM_021063	chr6,chr6,chr6,chr6	+,-,+,+	HIST1H2BD,HIST1H4D,HIST1H1E,HIST1H2BD	-472,30219,-2262,-472
chr5:107716893-107717168	chr5	+	107716901	107717105	True	NM_005246,NM_001163315	chr5,chr5	+,-	FER,FBXL17	366417,744
chr3:37034697-37035171	chr3	+	37034743	37035199	True	NM_001167617,NM_014805,NM_000249,NM_001167618,NM_001167619	chr3,chr3,chr3,chr3,chr3	+,-,+,+,+	MLH1,EPM2AIP1,MLH1,MLH1,MLH1	68,36,31,68,68
chr15:85200397-85200986	chr15	+	85200448	85200982	True	NR_004859,NM_032856,NM_021077,NM_205858	chr15,chr15,chr15,chr15	+,-,-,-	SCAND2,WDR73,NMB,NMB	-25808,-2927,870,870
chr7:32934475-32935587	chr7	+	32935073	32935530	True	NM_015483,NM_007270	chr7,chr7	-,+	KBTBD2,FKBP9	-3605,61474
chr1:149812691-149812897	chr1	+	149812694	149812916	True	NM_001040874,NM_001005464,NM_003548,NR_036461,NM_001034077,NM_003516,NM_021059	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,+,-,+,-,-	HIST2H2AA4,HIST2H3A,HIST2H4A,HIST2H2BC,HIST2H4B,HIST2H2AA3,HIST2H3C	1452,-29,-8524,9474,-8524,1452,-29
chr1:149812691-149812897	chr1	-	149824029	149824251	False	NM_001040874,NM_001005464,NM_003548,NR_036461,NM_001034077,NM_003516,NM_021059	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,-,-,+,+	HIST2H2AA4,HIST2H3A,HIST2H4A,HIST2H2BC,HIST2H4B,HIST2H2AA3,HIST2H3C	-1452,29,8524,-1689,8524,-1452,29
chrX:131191051-131192355	chrX	+	131191092	131192390	True	NM_001042452,NM_194277	chrX,chrX	+,-	MST4,FRMD7	-33507,69710
chr14:78082188-78082437	chr14	+	78082202	78082420	True	NM_031210,NM_004863	chr14,chr14	+,-	C14orf156,SPTLC2	92004,740
chr8:67839306-67839845	chr8	+	67839319	67839791	True	NR_002598,NR_002599,NM_001136160	chr8,chr8,chr8	-,-,+	SNORD87,SNHG6,C8orf45	-4535,-1542,-55644
chr3:36986990-36987195	chr3	+	36987006	36987222	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	-458,47618
chr18:2845799-2846388	chr18	+	2845963	2846381	True	NR_026659,NM_032048	chr18,chr18	-,+	LOC727896,EMILIN2	100290,646
chr6:165466514-165467424	chr6	+	165466521	165467463	True	NM_144980,NR_027284	chr6,chr6	-,+	C6orf118,LOC441177	255704,933575
chr14:48137490-48138535	chr14	+	48137611	48138407	True	NR_037792,NM_001113498	chr14,chr14	+,-	LRR1,MDGA2	1927007,5802
chr7:140099678-140101245	chr7	+	140099716	140101013	True	NM_207113,NM_032295,NM_001008749	chr7,chr7,chr7	-,-,+	SLC37A3,SLC37A3,RAB19	-1405,-1405,2829
chr16:90077111-90077744	chr16	+	90077175	90077743	True	NM_001042610,NM_024043,NR_023348	chr16,chr16,chr16	-,-,+	DBNDD1,DBNDD1,GAS8	8244,-646,11264
chr12:122715050-122716458	chr12	+	122715181	122716250	True	NM_030765,NR_024600,NM_138929,NM_019887,NR_024601	chr12,chr12,chr12,chr12,chr12	+,-,-,-,-	B3GNT4,DIABLO,DIABLO,DIABLO,DIABLO	-27005,-3113,-3113,-3113,-3113
chr1:41489812-41491301	chr1	+	41489816	41491274	True	NR_037868,NM_144990,NM_001168247	chr1,chr1,chr1	+,-,-	LOC100507178,SLFNL1,SLFNL1	-9605,-2389,-2419
chr11:8107062-8108279	chr11	+	8107288	8108262	True	NM_177972,NM_001135109	chr11,chr11	+,-	TUB,RIC3	-4430,82378
chr2:55746890-55747489	chr2	+	55747040	55747512	True	NM_080667,NM_001122964	chr2,chr2	+,-	CCDC104,SMEK2	-351,97334
chr9:86969510-86971466	chr9	+	86969973	86971441	True	NM_022127,NM_001018064	chr9,chr9	-,+	SLC28A3,NTRK2	12033,312024
chr16:34408801-34409241	chr16	+	34408821	34409071	True	NR_027080,NR_002837	chr16,chr16	+,-	LOC283914,UBE2MP1	188715,-4059
chr11:113347101-113348964	chr11	+	113347309	113348473	True	NM_016574,NM_178510,NM_000795	chr11,chr11,chr11	-,+,-	DRD2,ANKK1,DRD2	-1308,-88847,-1308
chr13:46746886-46747932	chr13	+	46747067	46747920	True	NM_002298,NM_001164211	chr13,chr13	-,+	LCP1,LRCH1	8590,379375
chr3:195620149-195621049	chr3	+	195620262	195621014	True	NM_001098516,NM_001010938	chr3,chr3	+,-	MUC20,TNK2	-169215,1468
chr9:136216839-136218524	chr9	+	136216980	136218321	True	NM_133640,NM_000972,NM_181491,NR_000017,NR_002447,NM_003172,NM_017503,NR_002448,NR_000016	chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,+,-,+,+,-,+,+,+	MED22,RPL7A,MED22,SNORD36B,SNORD24,SURF1,SURF2,SNORD36A,SNORD36C	-2008,-1963,-2008,-83,-781,5090,5099,-18,-87
chr2:191988902-191990502	chr2	+	191989345	191990202	True	NM_001130158,NM_003151	chr2,chr2	+,-	MYO1B,STAT4	119904,25786
chr1:154300673-154300989	chr1	+	154300675	154300957	True	NM_020452,NM_080429,NM_138740,NM_001005855	chr1,chr1,chr1,chr1	+,+,-,+	ATP8B2,AQP10,C1orf43,ATP8B2	-450,-7134,-107402,-2690
chr6:109102506-109102823	chr6	+	109102528	109102864	True	NR_033376,NM_001199934	chr6,chr6	+,-	NCRNA00222,SESN1	-29722,227379
chr11:62751318-62751622	chr11	+	62751391	62751671	True	NR_037193,NM_153278,NM_153277,NM_153276,NM_004790	chr11,chr11,chr11,chr11,chr11	+,-,-,-,-	SLC3A2,SLC22A6,SLC22A6,SLC22A6,SLC22A6	-102271,848,848,848,848
chr17:35850364-35850619	chr17	+	35850486	35850652	True	NM_198839,NM_007026	chr17,chr17	-,+	ACACA,DUSP14	-83584,-586
chr22:46403045-46403284	chr22	+	46403049	46403203	True	NM_058238,NR_027240	chr22,chr22	-,+	WNT7B,LOC730668	-30041,-604
chr20:21736630-21738599	chr20	+	21736629	21738641	True	NM_002509,NM_006192	chr20,chr20	-,+	NKX2-2,PAX1	-241965,-50383
chr11:46142030-46142860	chr11	+	46142043	46142691	True	NM_001101802,NM_052854,NM_016621	chr11,chr11,chr11	-,+,-	PHF21A,CREB3L1,PHF21A	348,156536,348
chr12:7271986-7272847	chr12	+	7272139	7272847	True	NM_014718,NM_031491	chr12,chr12	+,-	CLSTN3,RBP5	10119,8669
chr20:31590706-31591339	chr20	+	31590728	31591337	True	NM_025227,NM_080675	chr20,chr20	+,-	BPIL1,SUN5	4069,952
chr12:51250766-51251702	chr12	+	51251193	51251507	True	NM_182559,NM_001174130	chr12,chr12	+,-	TMPRSS12,SLC11A2	-14543,151606
chr17:39659215-39659634	chr17	+	39659296	39659624	True	NM_005801,NM_002274,NM_153490	chr17,chr17,chr17	+,-,-	EIF1,KRT13,KRT13	185502,2291,2291
chr14:39706490-39707102	chr14	+	39706621	39706823	True	NM_177452,NM_054024	chr14,chr14	-,+	TRAPPC6B,MIA2	-66987,-3551
chr1:23039165-23040264	chr1	+	23039243	23039912	True	NR_036214,NM_017449,NM_004442	chr1,chr1,chr1	-,+,+	MIR4253,EPHB2,EPHB2	149858,-1963,-1963
chr12:25399705-25401088	chr12	+	25399913	25400723	True	NM_001001660,NM_004985,NM_033360	chr12,chr12,chr12	+,-,-	LYRM5,KRAS,KRAS	-51829,3199,3199
chr19:18198624-18199050	chr19	+	18198639	18198761	True	NM_015016,NM_005535,NM_153701	chr19,chr19,chr19	+,-,-	MAST3,IL12RB1,IL12RB1	9841,-942,-942
chr7:5597857-5598489	chr7	+	5597893	5598523	True	NM_001101,NM_003088	chr7,chr7	-,+	ACTB,FSCN1	-27661,33930
chr16:68268749-68269009	chr16	+	68268775	68268914	True	NM_024939,NM_012320	chr16,chr16	-,+	ESRP2,PLA2G15	1283,10332
chr4:174255757-174256249	chr4	+	174255763	174256172	True	NM_003864,NM_001130689,NM_001130688,NM_002129	chr4,chr4,chr4,chr4	+,-,-,-	SAP30,HMGB2,HMGB2,HMGB2	35920,-843,-254,-168
chr3:50380498-50380956	chr3	+	50380554	50380876	True	NM_015896,NM_007022,NM_006545,NM_170712,NM_170713,NM_007182,NM_170714	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-,-	ZMYND10,CYB561D2,NPRL2,RASSF1,RASSF1,RASSF1,RASSF1	2330,7420,7660,-4890,-5659,-2187,-2187
chr5:135386562-135386848	chr5	+	135386587	135386846	True	NM_000358,NR_030583	chr5,chr5	+,-	TGFBI,VTRNA2-1	-22061,29497
chr7:66044020-66045963	chr7	+	66044371	66045888	True	NM_001167961,NR_002933	chr7,chr7	+,-	KCTD7,LOC493754	47979,-873
chr7:66044020-66045963	chr7	-	66230291	66230358	False	NR_003934,NM_014504	chr7,chr7	-,+	LOC729156,RABGEF1	79522,-24716
chr18:29038538-29040155	chr18	+	29038576	29039990	True	NM_004775,NM_001944	chr18,chr18	-,+	B4GALT6,DSG3	224746,-10895
chr4:493376-494848	chr4	+	493798	494888	True	NM_001127178,NM_133474,NM_017733	chr4,chr4,chr4	+,-,+	PIGG,ZNF721,PIGG	-860,-356,-860
chr11:94208661-94210110	chr11	+	94208697	94209593	True	NM_017704,NM_005590	chr11,chr11	+,-	ANKRD49,MRE11A	17559,17507
chr12:118454822-118456505	chr12	+	118455119	118456319	True	NM_018639,NM_181578,NM_007370,NM_001130113,NM_001130112	chr12,chr12,chr12,chr12,chr12	-,+,+,+,+	WSB2,RFC5,RFC5,RFC5,RFC5	42689,-662,-662,-662,-662
chrX:123096033-123096388	chrX	+	123096037	123096427	True	NM_001042751,NM_001042750,NM_006603,NM_001081550,NM_001042749	chrX,chrX,chrX,chrX,chrX	+,+,+,-,+	STAG2,STAG2,STAG2,THOC2,STAG2	-532,-532,-532,-229133,-1613
chr19:52511619-52511832	chr19	+	52511660	52511812	True	NM_198480,NM_001199324,NM_024840	chr19,chr19,chr19	-,-,+	ZNF615,ZNF615,ZNF613	-177,-177,-81023
chr17:263224-264286	chr17	+	263863	264261	True	NM_182705,NM_001013672	chr17,chr17	-,+	FAM101B,C17orf97	31528,-3797
chr8:23388564-23388840	chr8	+	23388571	23388871	True	NM_016612,NM_001128930	chr8,chr8	+,-	SLC25A37,ENTPD4	-2261,-73327
chr1:223742727-223743006	chr1	+	223742730	223742808	True	NM_001146068,NM_001143962	chr1,chr1	+,-	CAPN2,CAPN8	146486,110678
chr1:223742727-223743006	chr9	+	138942235	138942313	False	NM_015597,NM_144653	chr9,chr9	+,-	GPSM1,NACC2	279618,44868
chr19:33795565-33796182	chr19	+	33795724	33796186	True	NR_026887,NM_004364	chr19,chr19	+,-	LOC80054,CEBPA	-2012,-2294
chr19:37862208-37863949	chr19	+	37862238	37863884	True	NM_032453,NM_152484	chr19,chr19	+,-	ZNF527,ZNF569	-230,94517
chr14:56267125-56268084	chr14	+	56267177	56267986	True	NR_026796,NR_026797,NR_004844	chr14,chr14,chr14	-,-,+	C14orf34,C14orf34,RPL13AP3	-3785,-3785,-34265
chr12:8975801-8976103	chr12	+	8975821	8976041	True	NM_144670,NM_002355	chr12,chr12	+,-	A2ML1,M6PR	-723,126267
chr13:42623375-42623645	chr13	+	42623461	42623533	True	NM_178009,NM_001204504,NM_152910,NM_001009814	chr13,chr13,chr13,chr13	+,+,+,-	DGKH,DGKH,DGKH,KIAA0564	-669,-9340,-669,-88240
chr9:35862769-35863644	chr9	+	35862845	35863617	True	NM_001004487,NR_024006	chr9,chr9	-,+	OR13J1,LOC92973	6841,-2626
chr11:1412934-1413313	chr11	+	1412984	1413324	True	NM_019009,NM_003957	chr11,chr11	-,+	TOLLIP,BRSK2	-82092,-1906
chr9:115510978-115512882	chr9	+	115511417	115512650	True	NM_001012994,NM_021218	chr9,chr9	+,-	SNX30,C9orf80	483,-31030
chr3:9594435-9595192	chr3	+	9594850	9595048	True	NM_198560,NM_001077525	chr3,chr3	-,+	LHFPL4,MTMR14	488,96068
chr21:38072268-38072996	chr21	+	38072337	38073017	True	NM_001146077,NM_005069,NM_009586	chr21,chr21,chr21	-,+,+	CLDN14,SIM2,SIM2	-123470,-397,-397
chr18:21602160-21602903	chr18	+	21602469	21602933	True	NM_001135993,NR_024232,NM_018030	chr18,chr18,chr18	+,+,-	TTC39C,TTC39C,OSBPL1A	-8138,-8138,249315
chr1:13331304-13333214	chr1	+	13331650	13332951	True	NM_001013407,NM_001100631,NM_001013692	chr1,chr1,chr1	+,-,-	PRAMEF5,PRAMEF22,PRAMEF3	26867,21,42
chr1:13331304-13333214	chr1	-	13034262	13035563	False	NM_001100631,NM_001010889	chr1,chr1	+,-	PRAMEF22,PRAMEF6	-21,-26856
chr1:13331304-13333214	chr1	-	13139167	13140470	False	NM_001100631,NM_001013407	chr1,chr1	+,-	PRAMEF22,PRAMEF5	-103676,-21416
chrX:33267455-33268609	chrX	+	33267657	33268463	True	NM_004006,NM_152631	chrX,chrX	-,+	DMD,FAM47B	-37984,1692449
chr4:6989123-6989405	chr4	+	6989194	6989386	True	NM_153376,NM_001113363	chr4,chr4	-,+	CCDC96,TBC1D14	55392,-356
chr4:79012893-79013427	chr4	+	79013165	79013451	True	NM_025074,NM_144571	chr4,chr4	+,-	FRAS1,CNOT6L	-34492,-272621
chr3:183735426-183735827	chr3	+	183735626	183735782	True	NM_182537,NM_001023587,NM_005688	chr3,chr3,chr3	+,-,-	HTR3D,ABCC5,ABCC5	13549,-5,-5
chr1:110255684-110256085	chr1	+	110255886	110256018	True	NM_000851,NM_000849	chr1,chr1	+,-	GSTM5,GSTM3	-1073,27692
chr1:110255684-110256085	chr1	+	110211692	110211824	False	NM_005272,NM_001142368,NM_000848	chr1,chr1,chr1	-,+,+	GNAT2,GSTM2,GSTM2	-55987,-1099,-1099
chr5:10614853-10615234	chr5	+	10615009	10615275	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-50632,146162
chr4:147444202-147445567	chr4	+	147444201	147445585	True	NM_001029998,NM_032128,NM_004575	chr4,chr4,chr4	-,-,+	SLC10A7,SLC10A7,POU4F2	-1078,-1078,114459
chr1:151042577-151042874	chr1	+	151042678	151042864	True	NM_144618,NM_020239	chr1,chr1	+,-	GABPB2,CDC42SE1	215,-10553
chr7:140294607-140295460	chr7	+	140295122	140295244	True	NM_015689,NM_052853	chr7,chr7	-,+	DENND2A,ADCK2	7152,77708
chr21:44810042-44810283	chr21	+	44810071	44810253	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	59650,36799
chr19:10420511-10421064	chr19	+	10420888	10420955	True	NM_001031734,NM_001103167,NM_003259	chr19,chr19,chr19	-,-,+	FDX1L,ZGLP1,ICAM5	5787,-655,-20284
chr3:129800389-129800988	chr3	+	129800460	129800598	True	NM_001136152,NR_024252	chr3,chr3	+,-	ALG1L2,LOC729375	75,29732
chr4:80243323-80243932	chr4	+	80243322	80243901	True	NM_032693,NR_026555	chr4,chr4	-,+	NAA11,GDEP	3325,504723
chr5:114867259-114867567	chr5	+	114867259	114867593	True	NM_020177,NM_001284	chr5,chr5	-,+	FEM1C,AP3S1	13048,310025
chr19:33687975-33688568	chr19	+	33687999	33688261	True	NM_002333,NM_019849	chr19,chr19	+,-	LRP3,SLC7A10	-2458,28545
chr17:66449106-66449660	chr17	+	66449131	66449561	True	NM_017983,NM_212471	chr17,chr17	-,+	WIPI1,PRKAR1A	4145,58548
chr10:71906644-71907927	chr10	+	71906741	71907589	True	NM_018649,NM_001040273,NM_173555	chr10,chr10,chr10	+,-,-	H2AFY2,TYSND1,TYSND1	-94435,-245,-245
chr6:12008966-12009204	chr6	+	12008986	12009141	True	NM_032744,NM_002114	chr6,chr6	-,+	C6orf105,HIVEP1	-229706,3582
chr1:162487011-162488913	chr1	+	162487677	162488837	True	NM_175866,NM_053282	chr1,chr1	+,-	UHMK1,SH2D1B	-20140,-105749
chr9:33504167-33505769	chr9	+	33504307	33505058	True	NR_003667,NR_003573	chr9,chr9	-,+	SUGT1P1,ANXA2P2	6156,119164
chr16:86379449-86381345	chr16	+	86379842	86381206	True	NR_024406,NM_001451	chr16,chr16	-,+	LOC732275,FOXF1	-557,162926
chr7:145821177-145822522	chr7	+	145821452	145822174	True	NR_031645,NM_014141	chr7,chr7	-,+	MIR548F4,CNTNAP2	1253094,-8057
chrX:135629318-135629964	chrX	+	135629366	135629992	True	NM_004840,NR_030631	chrX,chrX	-,+	ARHGEF6,MIR934	233561,3044
chr15:41063518-41063877	chr15	+	41063653	41063909	True	NM_018145,NM_001130448,NM_005258	chr15,chr15,chr15	-,+,+	FAM82A2,C15orf62,GCHFR	-16195,-1545,-7419
chr4:84256396-84258220	chr4	+	84256400	84257965	True	NM_006665,NM_001098540,NM_001166498,NM_001199830,NM_016067	chr4,chr4,chr4,chr4,chr4	-,-,-,-,+	HPSE,HPSE,HPSE,HPSE,MRPS18C	-94,-366,-94,-434,119152
chr12:52001963-52003585	chr12	+	52002343	52003090	True	NM_014191,NM_007210	chr12,chr12	+,-	SCN8A,GALNT6	-17380,-217143
chr17:295701-296099	chr17	+	295716	295785	True	NM_182705,NM_001013672	chr17,chr17	-,+	FAM101B,C17orf97	3,-35649
chr19:57335929-57336794	chr19	+	57336033	57336760	True	NM_001146186,NR_023847	chr19,chr19	-,+	PEG3,PEG3-AS1	85,-12236
chr19:14062916-14063229	chr19	+	14063043	14063261	True	NM_138353,NM_001146255,NM_001146254	chr19,chr19,chr19	+,-,-	DCAF15,PODNL1,PODNL1	57,993,993
chr1:236228802-236229099	chr1	+	236228853	236229143	True	NM_002508,NM_003272	chr1,chr1	-,+	NID1,GPR137B	-372,76688
chr14:21151094-21151346	chr14	+	21151166	21151363	True	NM_001097577,NM_002937,NM_001145,NM_194431,NM_001001968	chr14,chr14,chr14,chr14,chr14	+,+,+,+,-	ANG,RNASE4,ANG,RNASE4,OR6S1	5568,1008,972,5568,-41316
chr15:80351520-80351830	chr15	+	80351614	80351718	True	NM_004049,NM_019006	chr15,chr15	-,+	BCL2A1,ZFAND6	-87971,302
chr20:25605146-25605690	chr20	+	25605198	25605584	True	NM_021067,NM_152667	chr20,chr20	+,-	GINS1,NANP	-216926,-550
chr11:64854055-64854469	chr11	+	64854071	64854303	True	NM_013265,NM_006782,NM_080668	chr11,chr11,chr11	+,+,-	C11orf2,ZFPL1,CDCA5	9379,-2428,-2456
chr3:101569019-101569276	chr3	+	101569029	101569323	True	NM_000986,NM_031419	chr3,chr3	-,+	RPL24,NFKBIZ	-163466,-722
chr4:87566080-87567608	chr4	+	87566385	87567316	True	NM_080685,NM_002753	chr4,chr4	+,-	PTPN13,MAPK10	-50973,-192102
chr2:153608037-153609313	chr2	+	153608047	153609299	True	NR_024526,NM_017892	chr2,chr2	+,-	ARL6IP6,PRPF40A	-33675,-34072
chr7:121036610-121037435	chr7	+	121036705	121037463	True	NM_057168,NM_001040020,NM_014888	chr7,chr7,chr7	+,-,-	WNT16,FAM3C,FAM3C	-67666,-283,-283
chr19:33465581-33465872	chr19	+	33465711	33465781	True	NM_152266,NM_032816	chr19,chr19	+,-	C19orf40,CCDC123	-2623,-2842
chr7:73155379-73155658	chr7	+	73155421	73155481	True	NM_148912,NM_148913,NR_026910,NR_026912,NR_026690,NM_001145364	chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,+,-	ABHD11,ABHD11,ABHD11,ABHD11,WBSCR26,ABHD11	-2237,-2237,-2237,-2231,-6073,-2237
chr8:95274124-95274441	chr8	+	95274213	95274403	True	NM_005261,NM_181702,NM_001161778	chr8,chr8,chr8	-,-,+	GEM,GEM,PDP1	194,194,-344272
chr11:107433222-107434868	chr11	+	107433600	107434880	True	NM_138775,NM_001130037	chr11,chr11	-,+	ALKBH8,ELMOD1	1631,26936
chr4:32146713-32147906	chr4	+	32147088	32147895	True	NM_015230,NM_032457	chr4,chr4	-,+	ARAP2,PCDH7	4098135,-1425109
chr19:55952771-55953379	chr19	+	55952917	55953359	True	NM_033113,NM_001145176	chr19,chr19	+,-	ZNF628,SHISA7	34339,921
chr7:143747420-143749160	chr7	+	143747453	143749201	True	NM_001003702,NM_012365	chr7,chr7	-,+	ARHGEF35,OR2A5	143650,-9
chr19:18435002-18435965	chr19	+	18435004	18435627	True	NM_017712,NM_012321	chr19,chr19	+,-	PGPEP1,LSM4	15780,-1003
chr9:132818450-132819077	chr9	+	132818798	132818876	True	NM_001136557,NM_015033,NM_020960,NM_001136558	chr9,chr9,chr9,chr9	+,-,+,+	GPR107,FNBP1,GPR107,GPR107	-2870,-13325,-2870,-2870
chr8:101575736-101576444	chr8	+	101575913	101576477	True	NM_198401,NM_003114	chr8,chr8	-,+	ANKRD46,SPAG1	-3901,-405401
chr13:99231680-99231960	chr13	+	99231688	99232002	True	NM_001032296,NR_036129	chr13,chr13	-,+	STK24,MIR3170	-2292,-370961
chr20:23667700-23669208	chr20	+	23668013	23669231	True	NM_001899,NR_001279	chr20,chr20	-,+	CST4,CSTT	481,-168281
chr3:183540681-183541109	chr3	+	183540686	183541120	True	NM_024871,NM_018023	chr3,chr3	-,+	MAP6D1,YEATS2	2323,-125131
chr7:139479038-139479397	chr7	+	139479101	139479385	True	NM_001166254,NM_022740,NM_001113239,NM_001130966	chr7,chr7,chr7,chr7	+,-,-,+	TBXAS1,HIPK2,HIPK2,TBXAS1	-1105,-1408,-1408,-1105
chr11:4628268-4629130	chr11	+	4628277	4629033	True	NM_018073,NM_001005169	chr11,chr11	-,+	TRIM68,OR52I1	454,-13059
chr1:47795767-47796799	chr1	+	47795978	47796464	True	NM_001136140,NM_003035,NM_016308	chr1,chr1,chr1	+,-,+	CMPK1,STIL,CMPK1	3004,-16159,3004
chr17:28902049-28902709	chr17	+	28902081	28902746	True	NM_206832,NR_015341	chr17,chr17	-,+	TMIGD1,LRRC37BP1	-241016,736
chr17:28902049-28902709	chr17	+	20535864	20535916	False	NM_001190790,NR_029393	chr17,chr17	+,-	CDRT15L2,KRT16P3	-52880,-128053
chr17:28902049-28902709	chr17	+	15720358	15720410	False	NM_006470,NR_002211	chr17,chr17	-,+	TRIM16,MEIS3P1	-134165,-30247
chr17:28902049-28902709	chr17	+	16796025	16796079	False	NR_026810,NR_029392	chr17,chr17	+,-	FAM106C,KRT16P2	-104023,-59878
chr5:168726907-168727702	chr5	+	168726956	168727422	True	NM_017785,NM_003062	chr5,chr5	+,-	CCDC99,SLIT3	283215,761
chr3:57679095-57680030	chr3	+	57679389	57679897	True	NM_007159,NM_152678	chr3,chr3	+,-	SLMAP,FAM116A	63276,-573
chr20:44048984-44050122	chr20	+	44049026	44049847	True	NM_001184729,NM_001184728,NM_015937,NM_014477,NM_001184730	chr20,chr20,chr20,chr20,chr20	+,+,+,-,+	PIGT,PIGT,PIGT,TP53TG5,PIGT	-4370,-4370,-4370,-42069,-4370
chr5:6583894-6584549	chr5	+	6583901	6584415	True	NR_024424,NR_024423,NM_001193455	chr5,chr5,chr5	+,+,-	LOC255167,LOC255167,NSUN2	-542,-1665,49108
chr20:44006076-44007545	chr20	+	44006158	44007290	True	NR_003189,NM_014477	chr20,chr20	+,-	SYS1-DBNDD2,TP53TG5	-14400,-133
chr8:145671524-145672536	chr8	+	145671624	145672118	True	NM_145754,NM_013432	chr8,chr8	+,-	KIFC2,TONSL	19619,-1812
chr4:190904196-190904689	chr4	+	190904446	190904531	True	NM_020040,NM_004477	chr4,chr4	-,+	TUBB4Q,FRG1	1546,-42523
chr4:190904196-190904689	chr16	-	90161736	90161792	False	NM_001098173,NR_023348	chr16,chr16	-,+	PRDM7,GAS8	-19398,-72779
chr6:26359091-26360739	chr6	+	26359237	26360415	True	NM_003543,NM_007047,NM_001197248,NM_001197249,NM_001197246,NM_001197247	chr6,chr6,chr6,chr6,chr6,chr6	-,+,+,+,+,+	HIST1H4H,BTN3A2,BTN3A2,BTN3A2,BTN3A2,BTN3A2	-73510,4982,5054,4982,7990,4982
chr1:187061445-187061972	chr1	+	187061447	187061825	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-411888,-263467
chr9:37753269-37753703	chr9	+	37753341	37753583	True	NM_016042,NM_144964	chr9,chr9	-,+	EXOSC3,RG9MTD3	31532,218
chr4:62411896-62413084	chr4	+	62411896	62412778	True	NM_015236,NM_001010874	chr4,chr4	+,-	LPHN3,TECRL	-49111,2862464
chr17:58153059-58153818	chr17	+	58153237	58153675	True	NM_000717,NM_022070	chr17,chr17	+,-	CA4,HEATR6	73626,2673
chr7:127253618-127253855	chr7	+	127253677	127253837	True	NM_006193,NM_020369	chr7,chr7	-,+	PAX4,FSCN3	1993,-20039
chr12:56583476-56584059	chr12	+	56583506	56584107	True	NM_139067,NM_003075,NM_001130420,NM_079423	chr12,chr12,chr12,chr12	-,-,-,+	SMARCC2,SMARCC2,SMARCC2,MYL6	-155,-155,-155,-31512
chr11:65627927-65628201	chr11	+	65627949	65628209	True	NM_025128,NM_005507	chr11,chr11	+,-	MUS81,CFL1	-128,-2145
chr1:27669805-27670276	chr1	+	27670108	27670312	True	NM_032872,NM_001193308,NM_004672	chr1,chr1,chr1	+,+,-	SYTL1,SYTL1,MAP3K6	-1676,-1676,23075
chr1:32084321-32085009	chr1	+	32084366	32084954	True	NM_001525,NR_033688	chr1,chr1	+,-	HCRTR1,PEF1	-1116,25314
chr19:51769174-51769411	chr19	+	51769237	51769337	True	NM_173635,NM_001163922	chr19,chr19	+,-	C19orf75,VSIG10L	-8324,76091
chr16:71554139-71555233	chr16	+	71554334	71554896	True	NM_001166395,NM_005769,NM_006961	chr16,chr16,chr16	+,+,-	CHST4,CHST4,ZNF19	5257,5126,-31080
chr8:144922078-144922970	chr8	+	144922112	144922924	True	NR_033849,NM_178564	chr8,chr8	+,-	LOC100128338,NRBP2	-105853,272
chr6:150284686-150285019	chr6	+	150284773	150284856	True	NM_025218,NM_001001788	chr6,chr6	+,-	ULBP1,RAET1G	286,-40559
chr8:21881099-21881681	chr8	+	21881186	21881648	True	NM_024815,NM_182795	chr8,chr8	-,+	NUDT18,NPM2	85334,705
chr7:75547479-75547702	chr7	+	75547640	75547738	True	NM_031925,NM_000941	chr7,chr7	-,+	TMEM120A,POR	76304,-3279
chr6:52706219-52707721	chr6	+	52706307	52707543	True	NM_014051,NM_153699	chr6,chr6	+,-	TMEM14A,GSTA5	-170484,3407
chr4:148652478-148652726	chr4	+	148652589	148652717	True	NM_138364,NM_024605	chr4,chr4	-,+	PRMT10,ARHGAP10	-47309,735
chr1:26128005-26129005	chr1	+	26128185	26128833	True	NM_206926,NM_020451,NR_024498	chr1,chr1,chr1	+,+,-	SEPN1,SEPN1,LOC646471	-1569,-1569,21324
chr13:37495688-37496616	chr13	+	37495732	37496498	True	NM_001127217,NM_005905,NM_181503	chr13,chr13,chr13	-,-,+	SMAD9,SMAD9,EXOSC8	-1323,-1323,78179
chr20:34000302-34000646	chr20	+	34000485	34000649	True	NM_018244,NM_199487,NM_007186,NM_001184977	chr20,chr20,chr20,chr20	-,-,+,-	UQCC,UQCC,CEP250,UQCC	-540,-540,42573,-540
chr12:6678807-6680058	chr12	+	6678921	6680103	True	NM_002046,NM_001033714,NM_006170	chr12,chr12,chr12	+,-,-	GAPDH,NOP2,NOP2	-35318,-1441,-1441
chr1:48321183-48323042	chr1	+	48321206	48322841	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	139772,365515
chr6:107774462-107775409	chr6	+	107774783	107775254	True	NM_018013,NM_020381	chr6,chr6	+,-	SOBP,PDSS2	36062,5582
chr20:33558333-33559488	chr20	+	33558397	33559258	True	NM_000178,NM_020884	chr20,chr20	-,+	GSS,MYH7B	-14796,-14745
chr5:138891978-138892521	chr5	+	138892034	138892550	True	NM_198282,NM_003339	chr5,chr5	-,+	TMEM173,UBE2D2	-29691,48200
chr2:139538327-139538744	chr2	+	139538334	139538754	True	NM_007226,NR_033658	chr2,chr2	-,+	NXPH2,LOC647012	-523,116139
chr18:44235776-44236374	chr18	+	44235818	44236414	True	NM_144612,NM_031303	chr18,chr18	-,+	LOXHD1,KATNAL2	632,290372
chr19:54985753-54986748	chr19	+	54985948	54986246	True	NM_052925,NM_145057	chr19,chr19	+,-	LENG8,CDC42EP5	-25941,-1526
chr16:68483214-68483620	chr16	+	68483259	68483577	True	NM_133458,NM_018667	chr16,chr16	+,-	ZFP90,SMPD3	90083,-850
chr2:74602548-74604160	chr2	+	74602722	74603986	True	NM_001135040,NM_001135041,NM_023019,NM_001190837,NR_024463,NM_004082	chr2,chr2,chr2,chr2,chr2,chr2	-,-,-,-,+,-	DCTN1,DCTN1,DCTN1,DCTN1,LOC100189589,DCTN1	3546,-860,-860,3546,8858,3546
chr16:33486537-33488499	chr16	+	33486754	33488380	True	NR_033866,NM_001205265	chr16,chr16	-,+	LOC390705,TP53TG3B	-188052,-224687
chrX:44193880-44195352	chrX	+	44194287	44195153	True	NM_022076,NM_025184	chrX,chrX	+,-	DUSP21,EFHC2	508095,7830
chr19:2015659-2016274	chr19	+	2015661	2016316	True	NM_001319,NM_017797	chr19,chr19	+,-	CSNK1G2,BTBD2	-74551,41
chr3:137890171-137891291	chr3	+	137890472	137890876	True	NM_014154,NM_016216	chr3,chr3	+,-	ARMC8,DBR1	15271,2965
chr7:128095055-128095771	chr7	+	128095296	128095754	True	NM_183243,NM_001098786,NM_013332	chr7,chr7,chr7	-,+,+	IMPDH1,C7orf68,C7orf68	-45260,129,129
chr9:79521160-79521469	chr9	+	79521283	79521505	True	NM_001013735,NM_015225	chr9,chr9	+,-	FOXB2,PRUNE2	113065,-280
chr4:76826306-76827623	chr4	+	76827118	76827634	True	NM_001130017,NM_006239	chr4,chr4	+,-	ART3,PPEF2	104702,-3437
chr17:17485121-17485379	chr17	+	17485124	17485358	True	NM_007169,NM_030665,NM_148172,NM_148173	chr17,chr17,chr17,chr17	-,+,-,-	PEMT,RAI1,PEMT,PEMT	437,99428,9686,-4345
chr9:116636913-116638098	chr9	+	116636912	116638116	True	NM_133374,NM_001633	chr9,chr9	+,-	ZNF618,AMBP	445,202686
chr10:85932119-85932471	chr10	+	85932193	85932453	True	NM_001017924,NM_207373	chr10,chr10	-,+	LRIT2,C10orf99	52881,1100
chr16:89043608-89043989	chr16	+	89043612	89043958	True	NR_023316,NM_005187	chr16,chr16	+,-	ACSF3,CBFA2T3	116295,-108
chr17:36281832-36282802	chr17	+	36282008	36282848	True	NM_032258,NR_024178,NM_001123391	chr17,chr17,chr17	+,-,+	TBC1D3F,LOC284100,TBC1D3	1111,-37645,1111
chr17:36281832-36282802	chr17	-	34758165	34758383	False	NM_001123392,NM_004773	chr17,chr17	-,+	TBC1D3H,ZNHIT3	-1115,84089
chr17:36281832-36282802	chr17	-	34809214	34809432	False	NM_001001418,NM_004773,NM_001040282	chr17,chr17,chr17	-,+,-	TBC1D3C,ZNHIT3,TBC1D3G	-1123,33040,-1111
chr17:36281832-36282802	chr17	-	34505106	34505324	False	NM_001001417,NM_001001435	chr17,chr17	-,+	TBC1D3B,CCL4L1	-1118,33143
chr17:36281832-36282802	chr17	-	34593150	34593368	False	NM_001001435,NM_001001418	chr17,chr17	+,-	CCL4L1,TBC1D3C	46665,-1123
chrX:70572786-70573280	chrX	+	70572809	70573291	True	NM_001171162,NM_004606	chrX,chrX	-,+	ZMYM3,TAF1	-97762,12822
chr22:39241243-39243086	chr22	+	39241374	39242883	True	NM_014293,NM_145699	chr22,chr22	-,+	NPTXR,APOBEC3A	-1357,110643
chr7:44086089-44087788	chr7	+	44086280	44087496	True	NR_024116,NM_001014436,NM_001122956,NR_015401,NM_014063,NR_024416	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,+,+	RASA4P,DBNL,DBNL,FLJ35390,DBNL,FLJ35390	-6058,-2092,-2092,-7633,-2092,-7264
chr14:20136936-20137281	chr22	+	16404698	16404913	False	NM_001005239,NR_001591	chr22,chr22	-,+	OR11H1,psiTPTE22	44941,677887
chr14:20136936-20137281	chr14	+	20136986	20137194	True	NM_001197287,NM_172194	chr14,chr14	-,+	OR11H2,OR4Q3	45347,78392
chr14:20136936-20137281	chr14	-	19422484	19422534	False	NM_001145442,NM_001013354	chr14,chr14	-,+	POTEM,OR11H12	597788,-44941
chr1:1824917-1825177	chr1	+	1824930	1825200	True	NM_002074,NM_138705	chr1,chr1	-,+	GNB1,CALML6	-2404,21065
chr19:55668378-55668901	chr19	+	55668410	55668878	True	NM_001126132,NM_001126133,NM_017729,NM_178837,NM_000363,NM_003283	chr19,chr19,chr19,chr19,chr19,chr19	-,-,+,-,-,-	TNNT1,TNNT1,EPS8L1,C19orf51,TNNI3,TNNT1	-7804,-7804,-76701,9190,272,-7804
chr2:203502690-203503970	chr2	+	203502892	203504002	True	NM_178231,NM_173511	chr2,chr2	-,+	ICA1L,FAM117B	232244,-3049
chr1:46669343-46669670	chr1	+	46669355	46669619	True	NM_001013615,NM_017739	chr1,chr1	+,-	C1orf190,POMGNT1	-400,-5234
chr21:45579758-45580797	chr21	+	45579830	45580584	True	NM_198155,NM_015259	chr21,chr21	+,-	C21orf33,ICOSLG	-26387,80300
chr11:58912161-58912442	chr11	+	58912187	58912351	True	NM_198847,NM_001142519,NM_001142520,NM_022074,NM_001142521,NM_001039396	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,-	FAM111A,FAM111A,FAM111A,FAM111A,FAM111A,MPEG1	2,-1920,-1920,2,-1920,68193
chr7:150554782-150555730	chr7	+	150554834	150555772	True	NM_001091,NM_014020	chr7,chr7	+,-	ABP1,TMEM176B	-5312,-56386
chr5:25286707-25287244	chr5	+	25286724	25287290	True	NR_037896,NM_020227	chr5,chr5	-,+	LOC340107,PRDM9	-446032,-1779058
chr14:93386866-93387299	chr14	+	93386891	93387286	True	NM_005606,NM_001275	chr14,chr14	-,+	LGMN,CHGA	-171844,2158
chr3:19977251-19978582	chr3	+	19977517	19977813	True	NM_144715,NM_004162	chr3,chr3	-,+	EFHB,RAB5A	-1811,10758
chr2:209054686-209056011	chr2	+	209054912	209056046	True	NM_001178000,NM_001099334	chr2,chr2	+,-	PIKFYVE,C2orf80	74944,-139
chr12:31403763-31404198	chr12	+	31403956	31404130	True	NR_026806,NM_001135811	chr12,chr12	+,-	FLJ13224,FAM60A	73119,75045
chrX:2669005-2669969	chrY	+	2619183	2619573	False	NR_003254,NM_003140	chrY,chrY	+,-	XGPY2,SRY	763,36269
chrX:2669005-2669969	chrX	+	2669183	2669573	True	NM_001141919,NM_001141920,NR_003254,NR_037842,NM_175569	chrX,chrX,chrX,chrX,chrX	+,+,+,-,+	XG,XG,XGPY2,NCRNA00102,XG	519,519,763,-135795,519
chr11:17409642-17409848	chr11	+	17409689	17409851	True	NM_000525,NM_001202439,NM_001166290	chr11,chr11,chr11	-,+,-	KCNJ11,DKFZp686O24166,KCNJ11	405,-36431,1077
chr3:122344307-122345679	chr3	+	122344645	122345569	True	NM_031458,NM_152615	chr3,chr3	-,+	PARP9,PARP15	-61122,-10171
chr7:128693984-128694491	chr7	+	128694174	128694497	True	NM_001191028,NM_012470,NR_002187,NR_034053	chr7,chr7,chr7,chr7	-,-,+,-	TNPO3,TNPO3,TPI1P2,TNPO3	781,781,779,781
chr9:133320758-133320967	chr9	+	133320791	133320853	True	NM_000050,NR_027440,NM_054012	chr9,chr9,chr9	+,-,+	ASS1,LOC100272217,ASS1	-748,134078,-748
chr10:134212589-134212836	chr10	+	134212591	134212869	True	NM_001098637,NM_138499,NM_173575	chr10,chr10,chr10	+,+,-	PWWP2B,PWWP2B,STK32C	-1940,-1940,-91114
chrX:109971710-109972862	chrX	+	109971766	109972757	True	NR_002718,NM_145234	chrX,chrX	+,-	TDGF3,CHRDL1	-208277,66376
chr1:93852413-93854100	chr1	+	93852505	93853510	True	NR_034089,NM_001938	chr1,chr1	-,+	LOC100131564,DR1	-41137,-41079
chr3:52865073-52865590	chr3	+	52865167	52865639	True	NM_002218,NM_001166449,NM_205853,NM_002217	chr3,chr3,chr3,chr3	-,-,-,+	ITIH4,ITIH4,MUSTN1,ITIH3	-450,-450,3646,-36434
chr6:14667710-14668857	chr6	+	14667775	14668785	True	NM_001031713,NM_004233	chr6,chr6	-,+	CCDC90A,CD83	-852986,-549961
chr6:26213101-26214419	chr6	+	26213101	26214172	True	NM_003545,NM_003518,NM_021052	chr6,chr6,chr6	+,-,+	HIST1H4E,HIST1H2BG,HIST1H2AE	-8279,2757,2975
chr6:52146555-52148090	chr6	+	52146888	52148134	True	NM_133367,NM_002388	chr6,chr6	+,-	PAQR8,MCM3	78791,1498
chr15:41046486-41046802	chr15	+	41046673	41046837	True	NM_018145,NM_005258	chr15,chr15	-,+	FAM82A2,GCHFR	671,9447
chr20:49346293-49346878	chr20	+	49346352	49346818	True	NM_032521,NM_080829	chr20,chr20	+,-	PARD6B,FAM65C	1262,-92926
chr8:30601938-30602247	chr8	+	30601950	30602122	True	NM_005671,NM_001195104	chr8,chr8	+,-	UBXN8,GSR	-311,-16464
chr12:112559430-112559666	chr12	+	112559601	112559679	True	NM_001143906,NM_024953,NM_006700	chr12,chr12,chr12	+,-,+	TRAFD1,NAA25,TRAFD1	3669,-12966,3669
chr11:118972596-118972835	chr11	+	118972606	118972852	True	NM_014807,NM_001382,NM_002105	chr11,chr11,chr11	+,-,-	C2CD2L,DPAGT1,H2AFX	5240,-13,-6429
chr8:17651606-17653239	chr8	+	17651989	17653038	True	NM_006197,NM_001001925,NM_001001924	chr8,chr8,chr8	+,-,-	PCM1,MTUS1,MTUS1	127327,5445,5445
chr3:49377889-49378508	chr3	+	49378037	49378506	True	NM_003363,NM_199443,NR_036233	chr3,chr3,chr3	-,-,+	USP4,USP4,MIR4271	-501,-501,-66535
chrX:70797342-70798120	chrX	+	70797526	70798152	True	NM_052957,NM_001142797	chrX,chrX	+,-	ACRC,CXCR3	-53,40265
chr12:54786123-54787257	chr12	+	54786556	54787306	True	NM_001130968,NM_015481,NR_029894,NM_001130967	chr12,chr12,chr12,chr12	-,-,+,-	ZNF385A,ZNF385A,MIR148B,ZNF385A	-1473,-8075,-55607,-1473
chr1:111681127-111682239	chr1	+	111681585	111682280	True	NM_178454,NM_006090,NM_001007794	chr1,chr1,chr1	-,+,+	DRAM2,CEPT1,CEPT1	608,552,-18
chr20:20693379-20693605	chr20	+	20693407	20693603	True	NM_020343,NM_002196	chr20,chr20	-,+	RALGAPA2,INSM1	-141,-344693
chr3:97709350-97710237	chr3	+	97709516	97710268	True	NM_153182,NM_054106	chr3,chr3	-,+	MINA,OR5AC2	-18221,95748
chr2:74650620-74650994	chr2	+	74650713	74651043	True	NM_001145054,NM_032118	chr2,chr2	-,+	C2orf81,WDR54	-5869,-1879
chr10:7661865-7662611	chr10	+	7662266	7662558	True	NM_002216,NM_032817	chr10,chr10	+,-	ITIH2,ITIH5	82677,-630
chr15:43401565-43401822	chr15	+	43401655	43401721	True	NM_024956,NM_174916	chr15,chr15	+,-	TMEM62,UBR1	24000,-3369
chr21:45554430-45555598	chr21	+	45554476	45555478	True	NM_198155,NM_004649,NM_015259	chr21,chr21,chr21	+,+,-	C21orf33,C21orf33,ICOSLG	-1034,-1034,105406
chr18:54307958-54309098	chr18	+	54308022	54309128	True	NM_052834,NM_015285,NM_004786,NR_024546	chr18,chr18,chr18,chr18	+,+,-,-	WDR7,WDR7,TXNL1,TXNL1	9487,9487,-2102,-2102
chr4:2063629-2063835	chr4	+	2063693	2063759	True	NM_005663,NM_178557	chr4,chr4	-,+	WHSC2,NAT8L	-52734,-2505
chr14:68162133-68162425	chr14	+	68162190	68162464	True	NM_016026,NM_152443	chr14,chr14	-,+	RDH11,RDH12	96,6138
chr15:78189646-78189917	chr15	+	78189706	78189890	True	NM_001101404,NR_027024	chr15,chr15	+,-	SH2D7,LOC645752	195036,29348
chr17:40834552-40834801	chr17	+	40834593	40834849	True	NM_016602,NM_024927,NM_003632	chr17,chr17,chr17	-,-,+	CCR10,PLEKHH3,CNTNAP1	-748,-5545,-12
chr14:75530862-75531291	chr14	+	75530902	75531163	True	NM_203488,NM_001042430,NM_001107,NM_024643	chr14,chr14,chr14,chr14	-,+,-,+	ACYP1,FAM164C,ACYP1,FAM164C	-166,5135,-166,5135
chr7:100888529-100888735	chr7	+	100888602	100888772	True	NM_016068,NM_006349,NM_014343,NM_001185080	chr7,chr7,chr7,chr7	-,+,-,-	FIS1,ZNHIT1,CLDN15,CLDN15	-231,-27668,-7375,-6501
chr16:14722884-14723625	chr16	+	14722943	14723548	True	NM_002582,NM_001134477,NM_016561	chr16,chr16,chr16	-,-,+	PARN,PARN,BFAR	633,629,3119
chr15:58337015-58337929	chr15	+	58337035	58337156	True	NM_020980,NM_003888	chr15,chr15	+,-	AQP9,ALDH1A2	93251,20807
chr21:35558797-35559394	chr21	+	35558811	35559433	True	NM_001127670,NR_027267,NR_027266	chr21,chr21,chr21	-,+,+	KCNE1,C21orf82,C21orf82	268680,-5886,-5886
chr7:128414306-128415038	chr7	+	128414439	128415007	True	NM_001201372,NM_001708	chr7,chr7	+,-	CCDC136,OPN1SW	16456,887
chr12:124019149-124019407	chr12	+	124019249	124019363	True	NR_037470,NM_178314	chr12,chr12	+,-	MIR3908,RILPL1	1592,-984
chr13:52581318-52582380	chr13	+	52581455	52582075	True	NM_001005918,NM_000053,NR_036571,NM_001004127	chr13,chr13,chr13,chr13	-,-,+,+	ATP7B,ATP7B,ALG11,ALG11	3605,3605,4447,4447
chr8:85125548-85127299	chr8	+	85126051	85126967	True	NM_001100391,NM_001099670	chr8,chr8	+,-	RALYL,C8orf59	-29016,1005734
chr16:70485115-70485753	chr16	+	70485255	70485701	True	NM_145059,NM_006927	chr16,chr16	+,-	FUK,ST3GAL2	2796,-12264
chr6:51920422-51921511	chr6	+	51920635	51921527	True	NR_029713,NM_138694	chr6,chr6	+,-	MIR206,PKHD1	87619,30946
chr20:43848668-43849728	chr20	+	43849027	43849778	True	NM_003064,NM_003008	chr20,chr20	-,+	SLPI,SEMG2	33486,231
chr6:37139032-37139278	chr6	+	37139145	37139221	True	NM_145316,NM_002648	chr6,chr6	-,+	TMEM217,PIM1	86242,-1274
chr2:130989217-130990548	chr2	+	130989309	130990374	True	NM_025029,NM_207312	chr2,chr2	+,-	MZT2B,TUBA3E	-49859,-33275
chr2:130989217-130990548	chr2	-	132199461	132199848	False	NR_002826,NM_080386	chr2,chr2	-,+	LOC401010,TUBA3D	2857,33817
chr15:43515437-43517196	chr15	+	43515558	43516980	True	NM_000119,NM_001114134,NM_037370	chr15,chr15,chr15	-,-,+	EPB42,EPB42,CCNDBP1	-2235,-2235,-37480
chr1:93810286-93811221	chr1	+	93810328	93811108	True	NR_034089,NM_001938	chr1,chr1	-,+	LOC100131564,DR1	317,369
chr6:41838815-41840100	chr6	+	41838974	41840005	True	NM_018561,NM_004053	chr6,chr6	-,+	USP49,BYSL	23144,48959
chr7:130132108-130132411	chr7	+	130132109	130132409	True	NR_004382,NM_002402,NM_177525,NR_029899,NM_177524	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	MESTIT1,MEST,MEST,MIR335,MEST	-1096,-222,-987,3542,-6114
chr12:31945587-31947035	chr12	+	31945606	31947048	True	NM_001135863,NM_001013699	chr12,chr12	+,-	METTL20,H3F3C	-133048,-431
chr10:71992621-71992821	chr10	+	71992623	71992715	True	NM_021129,NM_004096	chr10,chr10	-,+	PPA1,EIF4EBP2	525,171145
chr17:56322102-56322717	chr17	+	56322148	56322550	True	NM_006151,NR_027647,NM_001160102,NM_001165927	chr17,chr17,chr17,chr17	+,+,+,-	LPO,LPO,LPO,MKS1	-6412,-6412,-6412,-25182
chr1:213093784-213093994	chr1	+	213093801	213094021	True	NM_001136474,NR_027286	chr1,chr1	+,-	VASH2,NCRNA00292	29865,-62321
chr10:11069928-11070449	chr10	+	11070005	11070367	True	NR_024411,NM_006561	chr10,chr10	-,+	LOC254312,CELF2	-75879,-10164
chr17:27916929-27917198	chr17	+	27917106	27917172	True	NM_001085454,NM_014030,NM_152345	chr17,chr17,chr17	-,-,+	GIT1,GIT1,ANKRD13B	-496,-496,3354
chr12:129336409-129336826	chr12	+	129336537	129336873	True	NM_145648,NM_144669	chr12,chr12	-,+	SLC15A4,GLT1D1	-27996,1207
chr10:104612320-104612938	chr10	+	104612485	104612808	True	NM_000102,NM_144591,NR_037644,NM_001136200	chr10,chr10,chr10,chr10	-,+,+,+	CYP17A1,C10orf32,C10orf32-AS3MT,C10orf32	-15195,1158,1158,1158
chr9:33507783-33509360	chr9	+	33508198	33509228	True	NR_003667,NR_003573	chr9,chr9	-,+	SUGT1P1,ANXA2P2	1986,114994
chr16:66640820-66641839	chr16	+	66640942	66641557	True	NM_181553,NM_144601,NR_037619,NM_004614,NR_037613	chr16,chr16,chr16,chr16,chr16	+,+,+,-,+	CMTM3,CMTM3,CMTM3,TK2,CMTM3	-2428,-2767,-2361,-56627,-3060
chr12:122151515-122151980	chr12	+	122151712	122151977	True	NM_173855,NM_001080825	chr12,chr12	-,+	MORN3,TMEM120B	-44152,-1105
chr17:76162872-76163095	chr17	+	76162922	76162999	True	NM_003258,NM_004710	chr17,chr17	-,+	TK1,SYNGR2	20349,1671
chr1:115868666-115869773	chr1	+	115868733	115869817	True	NM_000549,NM_002506	chr1,chr1	+,-	TSHB,NGF	-296370,11097
chr12:57915661-57915922	chr12	+	57915755	57915945	True	NM_004083,NM_052897,NM_001195053,NM_001195055,NM_001195054,NM_001195057,NM_001195056	chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,+,-,-,-,-,-	DDIT3,MBD6,DDIT3,DDIT3,DDIT3,DDIT3,DDIT3	-1455,713,-1455,-1455,-1455,-1455,-1455
chr14:92788692-92789191	chr14	+	92788806	92789235	True	NM_153648,NM_004545,NM_153646,NM_153647	chr14,chr14,chr14,chr14	+,-,+,+	SLC24A4,NDUFB1,SLC24A4,SLC24A4	-2,-200653,916,301
chr4:155666466-155668075	chr4	+	155666542	155668079	True	NM_004744,NM_021870	chr4,chr4	+,-	LRAT,FGG	-1431,-132640
chr14:21458434-21459080	chr14	+	21458528	21458918	True	NM_014579,NM_201538,NM_001029991,NR_033419,NM_022734	chr14,chr14,chr14,chr14,chr14	+,-,+,+,+	SLC39A2,NDRG2,METTL17,SLC39A2,METTL17	8495,34405,-614,8495,-614
chr14:61114398-61114682	chr14	+	61114470	61114728	True	NM_001177963,NM_005982	chr14,chr14	+,-	MNAT1,SIX1	86730,1477
chr22:21636333-21636700	chr22	+	21636473	21636553	True	NR_003700,NR_024583	chr22,chr22	-,+	PI4KAP2,POM121L8P	235277,160
chr7:139207470-139207824	chr7	+	139207809	139207873	True	NM_001080511,NM_198508	chr7,chr7	+,-	CLEC2L,KLRG2	800,-39352
chr1:13449152-13451024	chr1	+	13449632	13451036	True	NM_001099854,NM_001024661,NM_001010890	chr1,chr1,chr1	-,-,+	PRAMEF14,PRAMEF13,PRAMEF9	1670,1670,-28508
chr1:13449152-13451024	chr1	+	13670487	13671891	False	NM_001099854,NM_001010890	chr1,chr1	-,+	PRAMEF14,PRAMEF9	1670,-28566
chr11:66276084-66277361	chr11	+	66276286	66277297	True	NM_024649,NM_207340	chr11,chr11	+,-	BBS1,ZDHHC24	821,36425
chr22:24251184-24251582	chr22	+	24251192	24251504	True	NM_001080843,NM_002415	chr22,chr22	-,+	GSTT2B,MIF	51924,-14678
chr5:76113314-76114473	chr5	+	76113519	76114521	True	NM_005242,NM_004101	chr5,chr5	+,-	F2RL1,F2RL2	311,-194279
chr8:86374302-86374893	chr8	+	86374320	86374878	True	NM_001738,NM_000067	chr8,chr8	-,+	CA1,CA2	-83978,1252
chr13:51409165-51409469	chr13	+	51409322	51409470	True	NM_198989,NM_024570	chr13,chr13	-,+	DLEU7,RNASEH2B	8465,74343
chr1:77334498-77334731	chr1	+	77334560	77334776	True	NM_005482,NM_030965	chr1,chr1	-,+	PIGK,ST6GALNAC5	350406,-1426
chr16:47008341-47008545	chr16	+	47008349	47008538	True	NM_005880,NM_001142466	chr16,chr16	-,+	DNAJA2,GPT2	-724,-89298
chr1:109792717-109793161	chr1	+	109792873	109793147	True	NM_001408,NM_001005290	chr1,chr1	+,-	CELSR2,PSRC1	-283,32693
chr15:66646422-66647462	chr15	+	66646515	66647302	True	NM_017858,NR_004388,NM_002755	chr15,chr15,chr15	-,-,+	TIPIN,SCARNA14,MAP2K1	1803,-6835,31908
chr10:101540134-101540590	chr10	+	101540139	101540590	True	NM_000392,NM_078470	chr10,chr10	+,-	ABCC2,COX15	1872,-47716
chr9:90588184-90589048	chr9	+	90588188	90588973	True	NM_001039803,NM_001145124,NM_001170640,NM_178432,NM_001170639,NM_012119	chr9,chr9,chr9,chr9,chr9,chr9	-,+,-,-,-,-	CDK20,FAM75C1,CDK20,CDK20,CDK20,CDK20	772,-55362,772,772,772,772
chr3:49821540-49821932	chr3	+	49821736	49821808	True	NM_153273,NM_001006115,NM_203370	chr3,chr3,chr3	-,-,+	IP6K1,IP6K1,C3orf54	2215,2215,18878
chr20:60715063-60716131	chr20	+	60715159	60716030	True	NM_198935,NM_002792	chr20,chr20	+,-	SS18L1,PSMA7	2791,2499
chr4:76439104-76439478	chr4	+	76439114	76439430	True	NM_001009922,NR_037913,NR_037914,NM_001008925,NM_015436,NM_144721	chr4,chr4,chr4,chr4,chr4,chr4	-,-,-,-,-,+	RCHY1,RCHY1,RCHY1,RCHY1,RCHY1,THAP6	260,260,260,260,260,223
chr12:51614782-51615322	chr12	+	51614896	51615193	True	NR_026893,NM_001136264	chr12,chr12	-,+	POU6F1,DAZAP2	-3419,17314
chr19:48775705-48776143	chr19	+	48775951	48776053	True	NM_001184904,NM_153608	chr19,chr19	-,+	CARD8,ZNF114	-16748,-1349
chr17:68123730-68125141	chr17	+	68123807	68125133	True	NM_170742,NR_036534	chr17,chr17	+,-	KCNJ16,FLJ36644	-22864,40460
chr5:177594204-177594933	chr5	+	177594297	177594981	True	NM_022762,NM_004499,NM_017838	chr5,chr5,chr5	+,+,-	RMND5B,HNRNPAB,NHP2	-36322,36526,-13336
chr11:65103577-65104281	chr11	+	65103582	65103689	True	NM_006268,NM_001077241	chr11,chr11	+,-	DPF2,SLC25A45	-2294,46504
chr12:50504325-50504687	chr12	+	50504388	50504692	True	NM_032901,NM_147190,NM_005276	chr12,chr12,chr12	+,-,+	C12orf62,LASS5,GPD1	1207,56455,-6638
chr20:52685780-52687014	chr20	+	52685784	52686952	True	NM_003657,NM_002623	chr20,chr20	-,+	BCAS1,PFDN4	402,137549
chr11:64885403-64885650	chr11	+	64885423	64885583	True	NM_001997,NR_037568,NR_037567,NM_014205,NM_003273,NM_004927	chr11,chr11,chr11,chr11,chr11,chr11	-,+,+,-,+,+	FAU,MRPL49,MRPL49,ZNHIT2,TM7SF2,MRPL49	4139,4132,4071,-253,-6133,4132
chr16:84001518-84001792	chr16	+	84001539	84001767	True	NM_001080442,NM_019065	chr16,chr16	-,+	SLC38A8,NECAB2	74045,469
chr15:42646760-42647496	chr15	+	42646833	42647383	True	NM_173087,NM_000070,NM_024344,NM_001110503	chr15,chr15,chr15,chr15	+,+,+,-	CAPN3,CAPN3,CAPN3,TMEM87A	4314,4314,4314,-81078
chr7:129250712-129251160	chr7	+	129250955	129251150	True	NR_029614,NM_005011	chr7,chr7	-,+	MIR182,NRF1	159233,404
chr10:99259378-99259741	chr10	+	99259415	99259707	True	NM_022362,NM_024954	chr10,chr10	-,+	MMS19,UBTD1	-1049,-698
chr21:44861491-44862017	chr21	+	44861758	44861994	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	7909,-14756
chr5:133447099-133448679	chr5	+	133447361	133448650	True	NM_001134851,NR_033449,NM_003202,NM_213648,NM_006930,NM_201632,NM_201634	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,-,+,+	TCF7,TCF7,TCF7,TCF7,SKP1,TCF7,TCF7	2647,2699,1751,2647,64124,2647,2647
chr16:85785906-85786108	chr16	+	85786012	85786128	True	NM_001861,NM_206967	chr16,chr16	+,-	COX4I1,C16orf74	47044,-1323
chr19:7992282-7992540	chr19	+	7992309	7992393	True	NM_206833,NM_003083,NR_030717	chr19,chr19,chr19	-,+,+	CTXN1,SNAPC2,SNAPC2	-1258,-7166,-6493
chr6:41243738-41243960	chr6	+	41243738	41243998	True	NR_002794,NM_018643	chr6,chr6	+,-	TREML2P1,TREM1	-26678,10509
chr3:137887216-137888493	chr3	+	137887473	137888246	True	NM_014154,NM_016216	chr3,chr3	+,-	ARMC8,DBR1	17901,5602
chr5:149738322-149739667	chr5	+	149738440	149739700	True	NM_001135244,NM_001135243,NM_001195141,NM_001135245,NM_000356,NM_001008657,NM_001025159	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,-	TCOF1,TCOF1,TCOF1,TCOF1,TCOF1,TCOF1,CD74	-1289,-1289,-1289,-1289,-1289,-1289,52673
chr4:149363320-149363527	chr4	+	149363324	149363542	True	NM_001166104,NM_000901,NM_024605	chr4,chr4,chr4	-,-,+	NR3C2,NR3C2,ARHGAP10	180,180,-709922
chr10:131262786-131263508	chr10	+	131262809	131263545	True	NM_002412,NR_036179	chr10,chr10	+,-	MGMT,MIR4297	1908,378143
chr1:44113272-44113714	chr1	+	44113490	44113574	True	NR_033827,NM_014663	chr1,chr1	-,+	LOC100132774,KDM4A	59494,2222
chr7:17086264-17087634	chr7	+	17086301	17087668	True	NM_176813,NM_001621	chr7,chr7	-,+	AGR3,AHR	-164688,250607
chrX:118697540-118698313	chrX	+	118697701	118698141	True	NM_001170569,NM_003336,NM_001170570,NM_022101	chrX,chrX,chrX,chrX	-,+,-,-	CXorf56,UBE2A,CXorf56,CXorf56	1281,10357,1306,1306
chr11:12697156-12697916	chr11	+	12697163	12697900	True	NM_021961,NM_013253	chr11,chr11	+,-	TEAD1,DKK3	-1251,-666246
chr20:37073701-37075272	chr20	+	37073970	37075210	True	NR_003239,NR_002972,NR_002986,NR_027241	chr20,chr20,chr20,chr20	+,+,+,-	SNHG11,SNORA39,SNORA60,LOC388796	86,1515,2801,-9952
chr4:132385907-132386436	chr4	+	132386133	132386389	True	NM_144643,NM_020815	chr4,chr4	-,+	SCLT1,PCDH10	-2371369,1684080
chr1:171702386-171702862	chr1	+	171702631	171702896	True	NM_001007239,NM_003762,NR_033704,NM_001185127	chr1,chr1,chr1,chr1	+,-,-,-	METTL13,VAMP4,VAMP4,VAMP4	47864,8542,8542,8542
chr19:37855890-37857837	chr19	+	37856225	37857774	True	NM_032453,NR_029390	chr19,chr19	+,-	ZNF527,LOC284412	4284,-96313
chr6:80377607-80377903	chr6	+	80377631	80377934	True	NM_031469,NM_181714	chr6,chr6	+,-	SH3BGRL2,LCA5	-36691,-130484
chr13:25089653-25091413	chr13	+	25089653	25091207	True	NM_006437,NR_002815	chr13,chr13	-,+	PARP4,LOC374491	-2705,63138
chr2:197032063-197033095	chr2	+	197032180	197032973	True	NM_001080539,NM_004226	chr2,chr2	+,-	CCDC150,STK17B	471382,3413
chr2:27357593-27358448	chr2	+	27357686	27358490	True	NM_032604,NM_178553,NM_013388	chr2,chr2,chr2	+,-,-	ABHD1,C2orf53,PREB	-11080,3892,-144
chr15:78735396-78736147	chr15	+	78735396	78735908	True	NM_025234,NM_004136	chr15,chr15	-,+	WDR61,IREB2	-143456,-4932
chr5:37374387-37376304	chr5	+	37375333	37376329	True	NM_153485,NM_018034,NM_004298	chr5,chr5,chr5	-,+,-	NUP155,WDR70,NUP155	-4136,3082,-4446
chr16:18940500-18942369	chr16	+	18941574	18941993	True	NM_015092,NM_024847	chr16,chr16	-,+	SMG1,TMC7	-3848,53262
chr1:109655505-109655731	chr1	+	109655516	109655730	True	NM_001122961,NM_020775	chr1,chr1	-,+	C1orf194,KIAA1324	799,854
chr10:90708622-90708952	chr10	+	90708669	90708989	True	NM_001613,NM_000043	chr10,chr10	-,+	ACTA2,FAS	3641,41298
chr4:169424652-169425042	chr4	+	169424858	169425044	True	NM_001012967,NM_001166108,NM_016081	chr4,chr4,chr4	-,+,+	DDX60L,PALLD,PALLD	-23220,-6699,-6699
chr6:13583292-13583616	chr6	+	13583442	13583506	True	NM_018988,NM_001193267,NM_031244,NM_012241	chr6,chr6,chr6,chr6	-,+,+,+	GFOD1,SIRT5,SIRT5,SIRT5	-95655,-8706,-8706,-8623
chr8:56039971-56041921	chr8	+	56040867	56041933	True	NM_052898,NR_027765	chr8,chr8	+,-	XKR4,SBF1P1	-25901,325998
chr21:46974568-46974798	chr21	+	46974618	46974798	True	NM_130444,NM_194255	chr21,chr21	+,-	COL18A1,SLC19A1	-99245,-12233
chr7:73275434-73275667	chr7	+	73275460	73275708	True	NM_152559,NM_182504	chr7,chr7	-,+	WBSCR27,WBSCR28	-18605,-22
chrX:64885591-64885970	chrX	+	64885663	64885813	True	NM_002444,NR_033742	chrX,chrX	+,-	MSN,FKSG43	1697,-113362
chr10:135384416-135385773	chr10	+	135384433	135385725	True	NM_001143764,NR_033789,NM_001143763,NM_130784,NM_000773	chr10,chr10,chr10,chr10,chr10	-,-,-,-,+	SYCE1,SPRNP1,SYCE1,SYCE1,CYP2E1	-5295,-971,-5295,-1557,-43617
chr10:135384416-135385773	chr10	+	135239638	135240591	False	NR_002934,NM_001012508	chr10,chr10	+,-	LOC619207,SPRN	26840,-1517
chr12:110172596-110173178	chr12	+	110172692	110173222	True	NM_032829,NR_026661	chr12,chr12	+,-	C12orf34,MGC14436	-20556,38117
chr1:230787933-230789124	chr1	+	230788079	230788956	True	NM_001145036,NM_007357,NM_000029	chr1,chr1,chr1	+,+,-	COG2,COG2,AGT	-9939,-9939,61435
chrX:46306709-46306979	chrX	+	46306713	46307017	True	NM_001039891,NM_001129898,NM_001129899,NM_001129900,NM_017776	chrX,chrX,chrX,chrX,chrX	-,+,+,+,+	ZNF674,ZNF673,ZNF673,ZNF673,ZNF673	97925,-140,-140,-140,-140
chr1:155826704-155826952	chr1	+	155826788	155827000	True	NM_001037533,NM_032292,NM_152280	chr1,chr1,chr1	-,-,+	GON4L,GON4L,SYT11	22,22,2259
chr22:35938102-35938525	chr22	+	35938227	35938443	True	NM_005368,NM_014310	chr22,chr22	-,+	MB,RASD2	74991,-926
chrX:30251587-30252681	chrX	+	30251740	30252630	True	NM_002363,NM_177415,NM_000475,NM_002365,NM_002367	chrX,chrX,chrX,chrX,chrX	+,+,-,+,+	MAGEB1,MAGEB1,NR0B1,MAGEB3,MAGEB4	9217,9217,74915,-3238,7426
chr17:1959462-1959747	chr17	+	1959569	1959681	True	NM_006497,NM_001098202,NR_029674,NR_029625	chr17,chr17,chr17,chr17	+,+,-,-	HIC1,HIC1,MIR132,MIR212	-1227,-16,-6267,-5895
chr20:3826307-3826619	chr20	+	3826316	3826487	True	NM_001810,NM_020746,NR_037922,NR_037921	chr20,chr20,chr20,chr20	-,+,+,+	CENPB,MAVS,MAVS,MAVS	-58979,958,958,958
chr5:130969962-130970431	chr5	+	130969962	130970431	True	NM_001164389,NM_001164388,NM_016340,NM_001164390,NM_001164386,NM_001164387,NM_020240	chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,-,-,+	RAPGEF6,RAPGEF6,RAPGEF6,RAPGEF6,RAPGEF6,RAPGEF6,CDC42SE2	550,550,550,550,550,550,-370318
chr3:120170855-120172347	chr3	+	120170857	120172231	True	NM_001168331,NM_007085	chr3,chr3	+,-	NDUFB4,FSTL1	142896,-939
chr14:73525483-73525792	chr14	+	73525601	73525681	True	NM_021239,NM_021260	chr14,chr14	+,-	RBM25,ZFYVE1	-431,-31681
chr11:10670508-10671175	chr11	+	10670517	10671167	True	NM_014633,NM_001098579	chr11,chr11	+,-	CTR9,MRVI1	101643,2731
chr17:11898580-11900478	chr17	+	11899040	11900326	True	NM_144680,NM_003010	chr17,chr17	-,+	ZNF18,MAP2K4	413,23808
chr21:35990223-35990824	chr21	+	35990253	35990767	True	NM_004414,NM_203417,NM_053277	chr21,chr21,chr21	-,-,+	RCAN1,RCAN1,CLIC6	-2871,-3508,50920
chr19:56246691-56247144	chr19	+	56246829	56247033	True	NM_001145014,NM_176820	chr19,chr19	+,-	RFPL4A,NLRP9	23473,2797
chr9:37800327-37800573	chr9	+	37800423	37800520	True	NM_001002269,NM_024345	chr9,chr9	-,+	EXOSC3,DCAF10	-15356,269
chr14:65069259-65071213	chr14	+	65069680	65071048	True	NM_006977,NM_172365	chr14,chr14	-,+	ZBTB25,C14orf50	-99126,-53111
chr20:48789050-48790865	chr20	+	48789211	48790556	True	NR_027889,NM_005194	chr20,chr20	-,+	TMEM189,CEBPB	-18876,16819
chr17:5028678-5029367	chr17	+	5028683	5028911	True	NM_014519,NM_004505	chr17,chr17	-,+	ZNF232,USP6	-2286,2775
chr2:10182329-10182540	chr2	+	10182332	10182405	True	NM_001177716,NM_003597,NM_001037160,NM_001177718	chr2,chr2,chr2,chr2	+,+,-,+	KLF11,KLF11,CYS1,KLF11	1550,1276,38184,1966
chr12:83081719-83082354	chr12	+	83081763	83082372	True	NM_152588,NR_033192	chr12,chr12	+,-	TMTC2,CCDC59	-887,-329179
chr5:134780083-134780435	chr5	+	134780133	134780435	True	NM_145282,NM_130848,NM_001099221	chr5,chr5,chr5	+,-,-	SLC25A48,C5orf20,TIFAB	389929,2653,7704
chr1:150568063-150569481	chr1	+	150568588	150569212	True	NM_182763,NR_036211	chr1,chr1	-,+	MCL1,MIR4257	-16374,-44234
chr1:9597633-9598170	chr1	+	9597954	9598172	True	NR_027045,NM_032315	chr1,chr1	-,+	C1orf200,SLC25A33	116522,1355
chr1:38476742-38478328	chr1	+	38476980	38478351	True	NM_004468,NM_016037	chr1,chr1	-,+	FHL3,UTP11L	-5746,32
chr19:34289089-34289372	chr19	+	34289161	34289243	True	NM_001129995,NM_001129994,NM_001166057,NM_024076	chr19,chr19,chr19,chr19	+,+,-,+	KCTD15,KCTD15,PEPD,KCTD15	-1469,-1469,-276362,-1469
chr8:56986211-56986681	chr8	+	56986236	56986652	True	NM_001011667,NM_001146227,NR_002437,NM_001023	chr8,chr8,chr8,chr8	+,-,-,-	CHCHD7,RPS20,SNORD54,RPS20	137662,538,48,538
chr13:100742915-100743704	chr13	+	100743063	100743725	True	NM_001127692,NM_001178004,NM_000282,NM_033132	chr13,chr13,chr13,chr13	+,+,+,-	PCCA,PCCA,PCCA,ZIC5	-1845,-1845,-1845,-118885
chr16:70209490-70209984	chr16	+	70209507	70209974	True	NR_033959,NM_173619	chr16,chr16	-,+	LOC729513,CLEC18C	50013,-1630
chr16:70209490-70209984	chr16	-	74453365	74453832	False	NM_001011880,NM_002811	chr16,chr16	-,+	CLEC18B,PSMD7	1586,-122744
chr12:56913829-56915152	chr12	+	56914142	56914851	True	NM_013267,NM_002898	chr12,chr12	-,+	GLS2,RBMS2	-31961,757
chr1:19598549-19599211	chr1	+	19598597	19599254	True	NM_001145289,NM_201252,NM_016183	chr1,chr1,chr1	-,-,+	AKR7L,AKR7L,MRTO4	1364,1364,-20573
chr19:43356529-43357412	chr19	+	43356712	43357452	True	NR_026824,NR_036584	chr19,chr19	-,+	PSG10P,LOC100289650	2468,-30748
chr6:10703198-10703882	chr6	+	10703335	10703823	True	NM_001145020,NR_026736,NR_026737,NM_017906	chr6,chr6,chr6,chr6	-,-,-,+	C6orf52,C6orf52,C6orf52,PAK1IP1	-8496,-8305,-8496,-8205
chr17:17479740-17480317	chr17	+	17479754	17480350	True	NM_007169,NM_018019,NM_148173	chr17,chr17,chr17	-,+,-	PEMT,MED9,PEMT	5445,-99505,479
chr8:134074796-134075968	chr8	+	134075065	134075990	True	NM_006748,NM_001204869	chr8,chr8	-,+	SLA,WISP1	-2462,127291
chr1:41250743-41251313	chr1	+	41250906	41251352	True	NM_004700,NM_172163,NM_133467	chr1,chr1,chr1	+,+,-	KCNQ4,KCNQ4,CITED4	-1273,-1273,76716
chr12:56224409-56224780	chr12	+	56224408	56224752	True	NR_036478,NR_036479,NR_036476,NR_036477,NM_032364	chr12,chr12,chr12,chr12,chr12	+,+,+,+,-	LOC440104,LOC440104,LOC440104,LOC440104,DNAJC14	-1067,-1067,-1067,-1067,-988
chr9:19238742-19239643	chr9	+	19238973	19239037	True	NR_038064,NM_017925	chr9,chr9	-,+	PLIN2,DENND4C	-111369,51711
chr4:156696511-156697744	chr4	+	156696802	156697584	True	NM_017419,NM_000857	chr4,chr4	-,+	ACCN5,GUCY1B3	89905,-16734
chr1:161043672-161044579	chr1	+	161043769	161044475	True	NR_033385,NM_001025598,NM_181720	chr1,chr1,chr1	+,-,-	KLHDC9,ARHGAP30,ARHGAP30	23675,-4009,-4009
chr12:7054047-7055328	chr12	+	7054109	7055189	True	NM_138425,NM_080548,NM_080549,NR_003010,NM_002831	chr12,chr12,chr12,chr12,chr12	+,+,+,-,+	C12orf57,PTPN6,PTPN6,SCARNA12,PTPN6	-967,550,5244,21630,5244
chr6:31368486-31369029	chr6_qbl_hap6	+	2661948	2662456	False	NM_001177519,NM_000247,NR_036523,NR_036524,NM_005514	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	+,+,+,+,-	MICA,MICA,MICA,MICA,HLA-B	2360,2360,-992,-80,-43443
chr6:31368486-31369029	chr6	+	31368502	31369010	True	NM_001177519,NM_000247,NR_036523,NR_036524,NM_005514	chr6,chr6,chr6,chr6,chr6	+,+,+,+,-	MICA,MICA,MICA,MICA,HLA-B	2360,2360,-992,-80,-43513
chr6:31368486-31369029	chr6_mann_hap4	+	2715168	2715332	False	NM_001177519,NM_000247,NR_036523,NR_036524,NM_005514	chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4	+,+,+,+,-	MICA,MICA,MICA,MICA,HLA-B	2472,2472,-1222,-310,-43724
chr6:31368486-31369029	chr6_ssto_hap7	+	2702300	2702808	False	NM_001177519,NM_000247,NR_036523,NR_036524,NM_005514	chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7	+,+,+,+,-	MICA,MICA,MICA,MICA,HLA-B	2359,2359,-992,-80,-43552
chr6:31368486-31369029	chr6_cox_hap2	+	2881198	2881706	False	NM_001177519,NM_000247,NR_036523,NR_036524,NM_005514	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,+,+,+,-	MICA,MICA,MICA,MICA,HLA-B	2363,2363,-992,-80,-43521
chr7:56021030-56021234	chr7	+	56021088	56021240	True	NM_015969,NM_207366	chr7,chr7	+,-	MRPS17,SEPT14	-1528,-90606
chr17:62972252-62972537	chr17	+	62972296	62972376	True	NR_026903,NM_001165933	chr17,chr17	-,+	AMZ2P1,RGS9	-593,161079
chr16:3099102-3099569	chr16	+	3099105	3099478	True	NM_001103175,NM_022468	chr16,chr16	-,+	CCDC64B,MMP25	-13563,-2474
chr4:184582817-184583073	chr4	+	184582816	184582896	True	NM_199053,NM_152682,NM_021942	chr4,chr4,chr4	+,-,+	C4orf41,RWDD4,C4orf41	-2426,-2485,-2426
chr17:29418761-29419301	chr17	+	29418900	29419344	True	NM_001128147,NM_001042492,NM_000267,NM_024683	chr17,chr17,chr17,chr17	+,+,+,-	NF1,NF1,NF1,C17orf42	2600,2600,2600,-185614
chr13:48804317-48805530	chr13	+	48804553	48805470	True	NM_014166,NM_021999	chr13,chr13	-,+	MED4,ITM2B	-135313,1803
chr3:127392852-127393458	chr3	+	127392929	127393435	True	NR_033428,NR_033429,NM_172027,NM_001142646	chr3,chr3,chr3,chr3	+,+,+,-	ABTB1,ABTB1,ABTB1,TPRA1	-1199,-1199,-1199,-83361
chr18:73138042-73138355	chr18	+	73138041	73138181	True	NM_005786,NM_001037331	chr18,chr18	+,-	TSHZ1,C18orf62	-215369,1468
chr3:112207269-112207551	chr3	+	112207352	112207460	True	NM_017945,NM_001085357	chr3,chr3	+,-	SLC35A5,BTLA	73434,10998
chr13:77167712-77168182	chr13	+	77167927	77168219	True	NR_026983,NM_138444	chr13,chr13	+,-	BTF3P11,KCTD12	334365,292371
chr17:29887600-29888665	chr17	+	29887606	29888607	True	NR_029710,NM_014210	chr17,chr17	+,-	MIR193A,EVI2A	-642,-238839
chr9:138854774-138855216	chr9	+	138854775	138855251	True	NM_016172,NM_020822	chr9,chr9	-,+	UBAC1,KCNT1	-1549,-260795
chr6:82578672-82580014	chr6	+	82578671	82579714	True	NM_006670,NM_017633	chr6,chr6	+,-	TPBG,FAM46A	493208,-116243
chr15:85429200-85430906	chr15	+	85429201	85430491	True	NM_201651,NM_004213,NM_014300	chr15,chr15,chr15	+,+,-	SLC28A1,SLC28A1,SEC11A	-1350,-1350,-169527
chr6:82806368-82807117	chr6	+	82806474	82806935	True	NM_006670,NM_015525	chr6,chr6	+,-	TPBG,IBTK	265987,150574
chrX:193413-193639	chrY	+	143534	143624	False	NR_028057,NM_018390,NM_012227	chrY,chrY,chrY	+,+,-	PLCXD1,PLCXD1,GTPBP6	-594,4436,37313
chrX:193413-193639	chrX	+	193534	193624	True	NR_028057,NM_018390,NM_012227	chrX,chrX,chrX	+,+,-	PLCXD1,PLCXD1,GTPBP6	-594,4436,37313
chr10:93669227-93670014	chr10	+	93669292	93669902	True	NM_003972,NM_152429	chr10,chr10	+,-	BTAF1,FGFBP3	13833,-34
chr15:44829946-44831757	chr15	+	44829977	44831215	True	NR_034171,NR_034170,NM_003758	chr15,chr15,chr15	-,-,+	LOC645212,LOC645212,EIF3J	-879,-856,-762
chr3:79783390-79784740	chr3	+	79783495	79784594	True	NM_001128929,NM_002941	chr3,chr3	+,-	ROBO2,ROBO1	-2636383,32517
chr1:35737291-35738400	chr1	+	35737688	35738280	True	NM_005066,NM_005095	chr1,chr1	-,+	SFPQ,ZMYM4	-78945,-3178
chr1:63061151-63061966	chr1	+	63061151	63061998	True	NM_033407,NM_014495	chr1,chr1	-,+	DOCK7,ANGPTL3	92021,1188
chr7:66337679-66339058	chr7	+	66337934	66338785	True	NR_003934,NM_017994	chr7,chr7	-,+	LOC729156,C7orf42	-28121,47417
chr2:234776527-234777015	chr2	+	234776725	234776995	True	NM_024080,NR_024322	chr2,chr2	+,-	TRPM8,MSL3P1	49047,110
chr10:97051351-97051551	chr10	+	97051372	97051510	True	NM_207321,NM_020992	chr10,chr10	+,-	C10orf129,PDLIM1	-97476,-591
chr14:60722182-60723073	chr14	+	60722268	60722832	True	NM_177951,NM_177952,NM_016029,NM_021003	chr14,chr14,chr14,chr14	+,+,-,+	PPM1A,PPM1A,DHRS7,PPM1A	-6355,-9851,-90057,-6355
chr11:72462163-72462769	chr11	+	72462355	72462755	True	NM_001040118,NM_033388	chr11,chr11	-,+	ARAP1,ATG16L2	729,62695
chr8:37370782-37371912	chr8	+	37371025	37371904	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	181396,233710
chr19:40500146-40501057	chr19	+	40500183	40500949	True	NM_003890,NM_178544	chr19,chr19	-,+	FCGBP,ZNF546	-59650,1993
chr12:49730074-49730358	chr12	+	49730149	49730359	True	NM_001008223,NM_024902	chr12,chr12	-,+	C1QL4,DNAJC22	662,10681
chr1:151297675-151298697	chr1	+	151297924	151298741	True	NM_002651,NM_001198775,NM_001198774,NM_001198773,NM_020832	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	PI4KB,PI4KB,PI4KB,PI4KB,ZNF687	1442,1442,1500,1442,-43184
chr18:13137866-13138719	chr18	+	13138024	13138623	True	NM_002828,NM_181481	chr18,chr18	-,+	PTPN2,C18orf1	-253690,80162
chr12:48357792-48358149	chr12	+	48357817	48358179	True	NM_001143841,NM_001844,NM_001143843,NM_001143842,NM_024056	chr12,chr12,chr12,chr12,chr12	+,-,+,+,+	TMEM106C,COL2A1,TMEM106C,TMEM106C,TMEM106C	-538,40156,-538,-538,-538
chr7:6750340-6750690	chr7	+	6750339	6750416	True	NR_002217,NM_006956,NM_016265	chr7,chr7,chr7	+,-,-	PMS2CL,ZNF12,ZNF12	24519,-3773,-3773
chr5:32443463-32443832	chr5	+	32443463	32443835	True	NM_016107,NM_006713	chr5,chr5	-,+	ZFR,SUB1	1059,141769
chr19:37095004-37095755	chr19	+	37095172	37095674	True	NM_001145649,NM_032825,NM_001145650,NR_027239	chr19,chr19,chr19,chr19	-,+,-,-	ZNF529,ZNF382,ZNF529,ZNF529	554,546,554,554
chr9:33236218-33236444	chr9	+	33236238	33236420	True	NM_014471,NM_001172415	chr9,chr9	+,-	SPINK4,BAG1	3775,28389
chr2:64234046-64235266	chr2	+	64234119	64235232	True	NM_006759,NM_001005739	chr2,chr2	+,-	UGP2,VPS54	-165156,11032
chr3:189356218-189357553	chr3	+	189356224	189357565	True	NM_001114979,NM_001114978,NM_003722,NM_018192	chr3,chr3,chr3,chr3	+,+,+,-	TP63,TP63,TP63,LEPREL1	-7073,-7073,-7073,481400
chr22:26568790-26569803	chr22	+	26568852	26569840	True	NM_021115,NM_001184773,NM_001184776,NM_001184777,NM_001184774,NM_001184775,NM_152841	chr22,chr22,chr22,chr22,chr22,chr22,chr22	+,+,+,+,+,+,-	SEZ6L,SEZ6L,SEZ6L,SEZ6L,SEZ6L,SEZ6L,HPS4	-3463,-3463,-3463,-3463,-3463,-3463,305761
chr10:118380394-118380690	chr10	+	118380398	118380644	True	NM_005396,NM_144661	chr10,chr10	+,-	PNLIPRP2,C10orf82	8,48887
chr1:148929881-148930148	chr2	-	91846287	91846339	False	NR_003503,NR_027238	chr2,chr2	+,-	GGT8P,LOC654342	117028,1686
chr1:148929881-148930148	chr1	+	148929976	148930190	True	NR_027355,NR_027354,NM_001024599,NR_027356	chr1,chr1,chr1,chr1	+,+,-,+	LOC645166,LOC645166,HIST2H2BF,LOC645166	-1741,214,469089,-1741
chr8:49294929-49295290	chr8	+	49294928	49295007	True	NM_003350,NM_001142857	chr8,chr8	+,-	UBE2V2,EFCAB1	-373984,352926
chr11:44069813-44070892	chr11	+	44069969	44070591	True	NM_001031854,NM_021926	chr11,chr11	+,-	ACCSL,ALX4	-489,261175
chr5:170313288-170313752	chr5	+	170313288	170313521	True	NM_004137,NM_022897	chr5,chr5	-,+	KCNMB1,RANBP17	-496650,-24443
chr12:118407313-118408033	chr12	+	118407478	118408064	True	NM_173598,NM_001130112	chr12,chr12	-,+	KSR2,RFC5	-1450,46443
chr10:75545618-75545906	chr10	+	75545660	75545728	True	NM_015037,NM_003635,NM_203298	chr10,chr10,chr10	+,-,+	KIAA0913,NDST2,CHCHD1	-106,25911,-3903
chr10:122621693-122622884	chr10	+	122622027	122622865	True	NM_018117,NR_033850	chr10,chr10	+,-	WDR11,LOC283089	-11398,-11336
chr6:151649493-151650340	chr6	+	151649855	151650215	True	NM_144497,NM_020861	chr6,chr6	+,-	AKAP12,ZBTB2	-3244,62526
chr10:74450321-74450932	chr10	+	74450401	74450820	True	NM_138357,NM_006077	chr10,chr10	+,-	CCDC109A,CBARA1	1068,-64452
chr1:228297510-228298028	chr1	+	228297878	228298070	True	NM_181456,NM_181454,NM_181455,NM_181441,NR_037415,NM_181465,NM_181464,NM_024319,NM_181463,NM_181462	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,+,-,-,-,-,-	MRPL55,MRPL55,MRPL55,MRPL55,MIR3620,MRPL55,MRPL55,C1orf35,MRPL55,MRPL55	-865,-865,-865,-865,-12974,-865,-865,-6856,-865,-865
chr5:135382204-135382899	chr5	+	135382318	135382886	True	NM_000358,NR_030583	chr5,chr5	+,-	TGFBI,VTRNA2-1	-17785,33452
chr22:36784098-36784400	chr22	+	36784145	36784359	True	NM_145343,NM_002473	chr22,chr22	+,-	APOL1,MYH9	-135079,-82
chr18:43199663-43199983	chr18	+	43199681	43199915	True	NM_007163,NM_020964	chr18,chr18	+,-	SLC14A2,EPG5	-4966,347440
chr4:146855688-146857350	chr4	+	146855848	146857218	True	NM_007080,NM_178835	chr4,chr4	+,-	LSM6,ZNF827	239616,2439
chr10:72433270-72434034	chr10	+	72433276	72434058	True	NM_139155,NM_080722,NM_005041	chr10,chr10,chr10	+,+,-	ADAMTS14,ADAMTS14,PRF1	-768,-768,-70745
chr12:26986970-26987537	chr12	+	26986987	26987321	True	NM_002223,NM_001171888	chr12,chr12	-,+	ITPR2,FGFR1OP2	-856,103983
chr9:33601295-33601935	chr9	+	33601830	33601920	True	NR_023917,NR_003573	chr9,chr9	-,+	PTENP1,ANXA2P2	75558,22302
chr22:25026123-25027446	chr22	+	25026828	25026888	True	NR_024593,NR_024494	chr22,chr22	-,+	POM121L10P,BCRP3	28276,1993
chr22:25026123-25027446	chr22	+	22992233	22992672	False	NM_199127,NR_024591	chr22,chr22	+,-	GGTLC2,POM121L1P	-3509,-5221
chr22:25026123-25027446	chr20	-	23963771	23963830	False	NM_178312,NM_178311,NR_001279	chr20,chr20,chr20	-,-,+	GGTLC1,GGTLC1,CSTT	3739,5643,-464046
chr9:26892128-26892458	chr9	+	26892187	26892461	True	NM_024828,NM_001099223,NM_001167575	chr9,chr9,chr9	-,+,-	C9orf82,IFT74,C9orf82	415,54575,415
chr1:111145702-111146147	chr1	+	111145763	111146195	True	NM_004974,NR_003599	chr1,chr1	-,+	KCNA2,CYMP	2830,-122439
chr2:46952-47164	chr2	+	46962	47148	True	NM_001077710,NM_001040649	chr2,chr2	-,+	FAM110C,ACP1	-374,217720
chr19:10813267-10813536	chr19	+	10813339	10813438	True	NM_031209,NR_024333	chr19,chr19	+,-	QTRT1,LOC147727	-1283,-48791
chr19:12793849-12794068	chr19	+	12793849	12793911	True	NM_013407,NM_032332,NM_001930,NM_013406	chr19,chr19,chr19,chr19	-,+,-,-	DHPS,WDR83,DHPS,DHPS	-1172,-13383,-1172,-1172
chr16:4401498-4402025	chr16	+	4401568	4402035	True	NM_032575,NM_016069	chr16,chr16	+,-	GLIS2,PAM16	-19404,-195
chr2:233470548-233470748	chr2	+	233470640	233470700	True	NM_145702,NR_027663	chr2,chr2	-,+	TIGD1,EFHD1	-55414,66
chr1:51698119-51698810	chr1	+	51698413	51698645	True	NM_001080494,NM_014372	chr1,chr1	-,+	TTC39A,RNF11	89343,3299
chr16:1823788-1824217	chr16	+	1823839	1824081	True	NM_080861,NM_002513,NM_001010865,NM_023936,NM_012225	chr16,chr16,chr16,chr16,chr16	-,-,+,-,+	SPSB3,NME3,EME2,MRPS34,NUBP2	8550,-2129,-661,-699,8851
chr1:6452375-6452940	chr1	+	6452402	6452922	True	NM_007274,NM_181864,NM_031475	chr1,chr1,chr1	-,-,+	ACOT7,ACOT7,ESPN	954,-6519,31925
chr14:105953778-105954014	chr14	+	105953800	105953934	True	NM_001311,NM_001519,NM_001198983,NM_001134876,NM_001134877,NM_001134875	chr14,chr14,chr14,chr14,chr14,chr14	+,-,+,+,+,+	CRIP1,BRF1,C14orf80,C14orf80,C14orf80,C14orf80	-594,-186471,2257,3651,2585,3651
chr3:37510680-37512593	chr3	+	37510733	37512484	True	NM_002207,NM_017724	chr3,chr3	+,-	ITGA9,LRRFIP2	-16971,-292882
chr6:110005999-110007431	chr6	+	110006993	110007437	True	NM_145025,NM_001145128,NM_014845	chr6,chr6,chr6	-,-,+	AKD1,AKD1,FIG4	5028,5028,4986
chr10:4693166-4694624	chr10	+	4693184	4694651	True	NR_024475,NR_015425	chr10,chr10	-,+	LOC100216001,LOC338588	25661,3696
chr6:43737346-43737563	chr6	+	43737390	43737450	True	NM_018135,NM_001025369,NM_001025368,NM_001025367,NM_001025366,NM_001033756,NM_001025370,NM_003376,NM_001171624,NM_001171625,NM_001171626,NM_001171627,NM_001171622,NM_001171623,NM_001204384,NM_001204385,NM_001171628,NM_001171629,NM_001171630	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+	MRPS18A,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA	-81841,495,495,495,495,495,495,495,495,495,495,495,495,495,495,495,495,495,495
chr5:58791977-58792464	chr5	+	58791976	58792414	True	NM_006203,NM_138453	chr5,chr5	-,+	PDE4D,RAB3C	89960,-913088
chr14:92203162-92203765	chr14	+	92203162	92203627	True	NM_024764,NM_017437	chr14,chr14	-,+	CATSPERB,CPSF2	-4749,384670
chr3:52312168-52312411	chr3	+	52312228	52312356	True	NM_001144951,NM_025222,NR_026701,NR_026700,NR_026702,NM_145262,NR_026699,NR_029660	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,-,+,+,+,+,+,-	GLYCTK,WDR82,GLYCTK,GLYCTK,GLYCTK,GLYCTK,GLYCTK,MIRLET7G	9479,353,9479,9479,9479,9479,9479,-9851
chr15:45492440-45493104	chr15	+	45492461	45493141	True	NM_138356,NM_004212	chr15,chr15	-,+	SHF,SLC28A2	282,51286
chr1:45672700-45673521	chr1	+	45672797	45673406	True	NM_020883,NR_024270	chr1,chr1	-,+	ZSWIM5,LOC400752	-547,96175
chr17:29247057-29247394	chr17	+	29247071	29247413	True	NM_024683,NM_018404	chr17,chr17	-,+	C17orf42,ADAP2	-13785,1340
chr14:94773372-94774533	chr14	+	94773432	94774261	True	NM_001100607,NM_058237	chr14,chr14	-,+	SERPINA10,PPP4R4	-13836,-132834
chrX:113817714-113817960	chrX	+	113817717	113817929	True	NM_000868,NM_000640	chrX,chrX	+,-	HTR2C,IL13RA2	621,434328
chr19:11689865-11690204	chr19	+	11689906	11690034	True	NM_001611,NM_145295,NM_001111036,NM_001111035,NM_001111034	chr19,chr19,chr19,chr19,chr19	-,+,-,-,-	ACP5,ZNF627,ACP5,ACP5,ACP5	-1353,18200,-105,-105,-314
chr6:25726665-25727139	chr6	+	25726678	25727170	True	NM_170745,NM_170610	chr6,chr6	-,+	HIST1H2AA,HIST1H2BA	44,-34
chr1:218458673-218459675	chr1	+	218458852	218459640	True	NM_016052,NM_018040	chr1,chr1	+,-	RRP15,GPATCH2	-274,-654443
chr3:196064893-196065368	chr3	+	196064910	196065168	True	NM_138461,NM_001204898,NM_152672,NM_001204897,NR_037950	chr3,chr3,chr3,chr3,chr3	-,-,+,-,-	TM4SF19,TM4SF19,OSTalpha,TM4SF19,TM4SF19-TCTEX1D2	173,173,-121578,173,173
chr8:48652291-48652937	chr8	+	48652353	48652743	True	NM_005914,NM_005195	chr8,chr8	+,-	MCM4,CEBPD	220019,-1627
chr17:13926716-13927238	chr17	+	13926759	13927277	True	NR_003261,NM_001007530	chr17,chr17	+,-	CDRT15P,CDRT15	537,212923
chr17:13926716-13927238	chr17	-	14140697	14141215	False	NM_001007530,NM_006041	chr17,chr17	-,+	CDRT15,HS3ST3B1	-547,63290
chr1:147419349-147421261	chr1	+	147419507	147420661	True	NR_003377,NM_001097616	chr1,chr1	-,+	PDZK1P1,GPR89C	63720,4905
chr1:147419349-147421261	chr1	-	145806890	145807946	False	NM_001097612,NM_001097616	chr1,chr1	-,+	GPR89A,GPR89C	19208,75921
chr11:4234378-4234984	chr11	+	4234452	4234934	True	NM_001005161,NM_001033	chr11,chr11	-,+	OR52B4,RRM1	154740,-118579
chr9:100161666-100162211	chr9	+	100161786	100162190	True	NR_026847,NM_014290	chr9,chr9	-,+	LOC286359,TDRD7	-2813,12111
chr11:45929916-45930522	chr11	+	45929999	45930547	True	NM_152312,NM_004813,NM_001080446,NM_057174	chr11,chr11,chr11,chr11	+,-,-,-	GYLTL1B,PEX16,C11orf94,PEX16	12648,9177,-1166,9177
chr12:112856205-112856488	chr12	+	112856366	112856510	True	NM_002834,NM_000970,NM_001024662	chr12,chr12,chr12	+,-,-	PTPN11,RPL6,RPL6	25,-8923,-8923
chr3:71799659-71800005	chr3	+	71799659	71799793	True	NM_173359,NM_018971,NM_001134649	chr3,chr3,chr3	-,+,-	EIF4E3,GPR27,EIF4E3	4181,3407,3789
chr11:62378903-62379157	chr11	+	62378958	62379124	True	NM_004739,NM_153265,NM_000327	chr11,chr11,chr11	-,-,+	MTA2,EML3,ROM1	-9655,1163,1088
chr11:8965638-8966170	chr11	+	8965672	8966066	True	NM_020646,NM_182901	chr11,chr11	-,+	ASCL3,C11orf17	-1092,-32925
chr11:64488842-64490083	chr11	+	64488885	64490078	True	NM_153378,NM_138732,NM_015080	chr11,chr11,chr11	+,-,-	SLC22A12,NRXN2,NRXN2	-130654,632,632
chr14:62297261-62298117	chr14	+	62297344	62297936	True	NM_001017970,NM_003082	chr14,chr14	-,+	TMEM30B,SNAPC1	-548814,-68320
chr2:61700214-61701121	chr2	+	61700709	61701049	True	NM_014709,NM_152392	chr2,chr2	-,+	USP34,AHSA2	-2860,-296208
chr14:50235351-50235622	chr14	+	50235351	50235595	True	NM_001197331,NM_014315	chr14,chr14	-,+	POLE2,KLHDC2	-80253,-615
chr4:187810662-187811231	chr4	+	187810699	187811097	True	NM_000128,NM_005245	chr4,chr4	+,-	F11,FAT1	-623632,-165712
chr5:112312162-112312404	chr5	+	112312271	112312366	True	NM_005669,NM_152624	chr5,chr5	-,+	REEP5,DCP2	-54240,66
chr19:51146622-51146859	chr19	+	51146738	51146870	True	NM_032298,NM_001195076,NM_001160329,NM_001160328	chr19,chr19,chr19,chr19	-,+,-,-	SYT3,LOC342918,SYT3,SYT3	-5436,5831,-3646,-3646
chr5:140263260-140263539	chr5	+	140263265	140263483	True	NM_031865,NM_031864,NM_002109,NM_018903,NM_018904	chr5,chr5,chr5,chr5,chr5	+,+,-,+,+	PCDHA13,PCDHA12,HARS,PCDHA12,PCDHA13	-1462,-8385,-192294,-8385,-1462
chr22:27281881-27282915	chr22	+	27281953	27282812	True	NR_033321,NM_001887	chr22,chr22	+,-	MIAT,CRYBB1	-228558,-267962
chr11:33786623-33787836	chr11	+	33786883	33787892	True	NM_012175,NM_033406,NM_012194	chr11,chr11,chr11	-,-,+	FBXO3,FBXO3,C11orf41	8236,8236,-223065
chr1:180989153-180991060	chr1	+	180989702	180990946	True	NM_001194999,NM_005819	chr1,chr1	+,-	MR1,STX6	11614,1157
chr4:102718875-102720729	chr4	+	102718955	102719535	True	NM_001130692,NM_001127507,NM_017935	chr4,chr4,chr4	-,+,+	PPP3CA,BANK1,BANK1	-450327,-7255,-7255
chr8:17438814-17439818	chr8	+	17438868	17439755	True	NM_020749,NM_006207	chr8,chr8	-,+	MTUS1,PDGFRL	115546,-4977
chr22:24576837-24577118	chr22	+	24576972	24577110	True	NM_001099781,NM_019601	chr22,chr22	-,+	GGT5,SUSD2	64050,333
chr1:13910408-13910665	chr1	+	13910501	13910691	True	NM_001006625,NM_001010847,NM_006474,NM_001006624,NM_198389	chr1,chr1,chr1,chr1,chr1	+,-,+,+,+	PDPN,LRRC38,PDPN,PDPN,PDPN	1275,-70259,-300,1275,-300
chr15:72524235-72525100	chr15	+	72524247	72525035	True	NM_182471,NM_182470,NM_002654,NM_145204	chr15,chr15,chr15,chr15	-,-,-,+	PKM2,PKM2,PKM2,SENP8	-563,-563,-563,-113667
chr11:126046847-126047425	chr11	+	126046857	126047455	True	NM_001144827,NM_024556	chr11,chr11	-,+	RPUSD4,FAM118B	34182,34163
chr3:50130593-50131680	chr3	+	50131019	50131365	True	NR_036627,NM_032355,NM_005778	chr3,chr3,chr3	+,-,+	RBM5,MON1A,RBM5	-4718,-163574,-4718
chr10:124212994-124214862	chr10	+	124213514	124214764	True	NM_001099667,NM_001010912,NM_002775	chr10,chr10,chr10	+,-,+	ARMS2,C10orf120,HTRA1	-96,244632,6276
chr6:43739397-43739685	chr6	+	43739523	43739583	True	NM_018135,NM_001025369,NM_001025368,NM_001025367,NM_001025366,NM_001033756,NM_001025370,NM_003376,NM_001171624,NM_001171625,NM_001171626,NM_001171627,NM_001171622,NM_001171623,NM_001204384,NM_001204385,NM_001171628,NM_001171629,NM_001171630	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+	MRPS18A,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA	-83974,-1628,-1628,-1628,-1628,-1628,-1628,-1628,-1628,-1628,-1628,-1628,-1628,-1628,-1628,-1628,-1628,-1628,-1628
chr2:37420577-37421733	chr2	+	37420836	37421772	True	NR_037880,NR_037879,NM_001032377	chr2,chr2,chr2	+,+,-	LOC100505876,LOC100505876,SULT6B1	1862,1862,-5146
chr1:76249255-76250794	chr1	+	76250124	76250576	True	NM_004582,NM_080868,NR_003042,NR_002749,NR_002748	chr1,chr1,chr1,chr1,chr1	+,-,+,+,+	RABGGTB,ASB17,SNORD45C,SNORD45A,SNORD45B	1309,147590,2180,2997,4585
chr10:8097085-8097290	chr10	+	8097218	8097290	True	NR_024255,NM_002051,NR_024256,NM_001002295	chr10,chr10,chr10,chr10	-,+,-,+	FLJ45983,GATA3,FLJ45983,GATA3	-1771,-602,-1771,-602
chr6:125340063-125341780	chr6	+	125340080	125341819	True	NR_026876,NM_152553	chr6,chr6	-,+	STL,RNF217	-55907,-35617
chr12:49353173-49353564	chr12	+	49353451	49353515	True	NM_001659,NM_005430	chr12,chr12	-,+	ARF3,WNT1	-2199,18720
chr10:122635703-122637326	chr10	+	122635783	122636496	True	NM_018117,NR_033850	chr10,chr10	+,-	WDR11,LOC283089	-25149,-25092
chr16:81129677-81129930	chr16	+	81129700	81129772	True	NM_004483,NR_033249,NR_033247,NM_015251	chr16,chr16,chr16,chr16	-,-,-,+	GCSH,GCSH,LOC100329108,ATMIN	258,258,232,-60293
chr17:76026321-76026895	chr17	+	76026494	76026888	True	NM_018996,NM_001127198	chr17,chr17	+,-	TNRC6C,TMC6	-26227,98023
chrX:48454193-48455473	chrX	+	48454474	48455316	True	NM_017883,NM_001166426,NM_033518,NR_029427	chrX,chrX,chrX,chrX	+,+,-,+	WDR13,WDR13,SLC38A5,WDR13	563,907,-125830,563
chr17:77753306-77753780	chr17	+	77753424	77753804	True	NM_005189,NM_020649,NM_032647	chr17,chr17,chr17	+,-,+	CBX2,CBX8,CBX2	-1498,17161,-1498
chr4:62418071-62418684	chr4	+	62418074	62418733	True	NM_015236,NM_001010874	chr4,chr4	+,-	LPHN3,TECRL	-55293,2856502
chr17:38258180-38258534	chr17	+	38258229	38258519	True	NM_001012241,NM_021724	chr17,chr17	+,-	MSL1,NR1D1	20270,-1256
chrX:125954003-125955210	chrX	+	125954235	125955241	True	NM_178470,NM_001122716	chrX,chrX	-,+	DCAF12L1,CXorf64	-267393,-551
chr16:730056-730388	chr16	+	730099	730215	True	NM_001005920,NM_003961,NM_005861	chr16,chr16,chr16	-,+,+	JMJD8,RHBDL1,STUB1	4274,-4075,-35
chr1:84944446-84944885	chr1	+	84944648	84944886	True	NM_025065,NM_005274	chr1,chr1	+,-	RPF1,GNG5	33,27429
chr12:15127342-15128578	chr12	+	15127355	15128442	True	NM_001175,NM_006205	chr12,chr12	-,+	ARHGDIB,PDE6H	-12793,-1450
chr2:163695760-163696309	chr2	+	163695856	163696328	True	NM_033272,NM_012198,NM_173162	chr2,chr2,chr2	-,+,-	KCNH7,GCA,KCNH7	-599,-495325,-599
chrX:15804152-15805794	chrX	+	15804286	15805584	True	NR_002725,NM_005089	chrX,chrX	-,+	INE2,ZRSR2	180,2989
chr3:186651114-186652646	chr3	+	186651209	186652502	True	NM_181573,NM_173217,NM_173216	chr3,chr3,chr3	-,+,+	RFC4,ST6GAL1,ST6GAL1	-126725,-2945,-2945
chr7:918916-919149	chr7	+	918979	919149	True	NM_015949,NM_006869	chr7,chr7	+,-	GET4,ADAP1	-2840,75190
chr17:41323302-41323504	chr17	+	41323417	41323553	True	NM_007300,NM_031858,NM_005899,NM_031862	chr17,chr17,chr17,chr17	-,+,+,+	BRCA1,NBR1,NBR1,NBR1	-45917,-958,-223,-971
chr17:29301788-29302673	chr17	+	29302348	29302694	True	NM_001184992,NM_197939,NM_024683,NR_002221,NM_032322	chr17,chr17,chr17,chr17,chr17	+,+,-,+,+	RNF135,RNF135,C17orf42,DPRXP4,RNF135	-4443,-4443,-69062,-46,-4443
chr2:234757122-234758215	chr2	+	234757309	234758233	True	NM_018410,NM_024080	chr2,chr2	-,+	HJURP,TRPM8	5029,67809
chr2:176982540-176983919	chr2	+	176982573	176983963	True	NM_002148,NM_014213,NM_001080458	chr2,chr2,chr2	+,+,-	HOXD10,HOXD9,EVX2	-1132,3449,-33883
chr5:150021102-150022731	chr5	+	150021263	150022723	True	NM_018047,NM_007286,NM_001109974	chr5,chr5,chr5	-,+,+	RBM22,SYNPO,SYNPO	57996,-1115,-1115
chr19:48017402-48017716	chr19	+	48017401	48017727	True	NM_015711,NM_003827	chr19,chr19	+,-	GLTSCR1,NAPA	93725,820
chr6:107809640-107810086	chr6	+	107809683	107810103	True	NM_018013,NM_020381	chr6,chr6	+,-	SOBP,PDSS2	1213,-28904
chr13:19528126-19528791	chr13	+	19528127	19528801	True	NR_027995,NR_026852	chr13,chr13	-,+	LOC284232,LOC348021	-82018,53597
chr14:82000101-82000310	chr14	+	82000113	82000205	True	NM_005065,NM_000369	chr14,chr14	-,+	SEL1L,TSHR	50,-578295
chr3:58655592-58656662	chr3	+	58655717	58656701	True	NM_138805,NM_153331	chr3,chr3	-,+	FAM3D,KCTD6	-3156,-171683
chr8:27632370-27632675	chr8	+	27632435	27632697	True	NM_018246,NM_001017420	chr8,chr8	-,+	CCDC25,ESCO2	-2265,-428
chr2:239050138-239050780	chr2	+	239050233	239050779	True	NM_198582,NM_030768	chr2,chr2	+,-	KLHL30,ILKAP	-2921,61595
chr14:34927945-34928201	chr14	+	34927945	34928061	True	NR_002937,NM_138288	chr14,chr14	+,-	C14orf19,C14orf147	481066,3465
chr14:72431521-72432255	chr14	+	72431561	72432301	True	NM_004296,NM_012074	chr14,chr14	+,-	RGS6,DPF3	-31826,928558
chr16:70720892-70721295	chr16	+	70720976	70721226	True	NM_001172772,NM_138383	chr16,chr16	+,-	IL34,MTSS1L	-63132,-1022
chr16:79729234-79729581	chr16	+	79729235	79729419	True	NM_005360,NM_130897	chr16,chr16	-,+	MAF,DYNLRB2	-94613,845434
chr17:7940774-7941469	chr17	+	7940789	7941225	True	NM_001141,NM_001139,NM_001039131,NM_001039130	chr17,chr17,chr17,chr17	+,-,+,+	ALOX15B,ALOX12B,ALOX15B,ALOX15B	1132,49846,1132,1132
chr1:19579115-19579492	chr1	+	19579419	19579517	True	NM_016183,NM_015047	chr1,chr1	+,-	MRTO4,KIAA0090	-1395,-1373
chr2:223535847-223536141	chr2	+	223535933	223536109	True	NM_058165,NM_005687	chr2,chr2	+,-	MOGAT1,FARSB	347,-15106
chr13:29593439-29594575	chr13	+	29593462	29594623	True	NM_181785,NM_001033602	chr13,chr13	-,+	SLC46A3,MTUS2	-300312,4124
chr2:73339667-73339877	chr2	+	73339708	73339806	True	NM_015470,NM_001134462	chr2,chr2	-,+	RAB11FIP5,NOTO	390,89579
chr2:210873316-210875194	chr2	+	210873364	210875105	True	NM_152519,NM_006916,NM_199229	chr2,chr2,chr2	-,+,+	C2orf67,RPE,RPE	161007,-6063,-6034
chr17:79448718-79449252	chr17	+	79448787	79449045	True	NM_001077182,NR_036152	chr17,chr17	+,-	FSCN2,MIR3186	46371,-30573
chr6:52627474-52628842	chr6	+	52627597	52628884	True	NM_014051,NM_000846	chr6,chr6	+,-	TMEM14A,GSTA2	-91764,105
chr3:57322901-57323250	chr3	+	57323098	57323288	True	NM_012096,NM_001142733	chr3,chr3	+,-	APPL1,ASB14	-61396,3472
chr1:26670796-26671541	chr1	+	26670821	26671263	True	NM_001039775,NM_001803	chr1,chr1	-,+	AIM1L,CD52	9408,-26461
chr17:6730671-6731394	chr17	+	6730867	6731173	True	NR_002710,NM_053285	chr17,chr17	+,-	ALOX12P2,TEKT1	25721,3949
chr5:167915641-167917112	chr5	+	167915708	167917163	True	NM_002887,NR_029520	chr5,chr5	+,-	RARS,MIR103-1	-2299,70867
chr4:6199943-6200350	chr4	+	6199959	6200375	True	NM_001099433,NM_144720,NR_037863	chr4,chr4,chr4	-,-,+	JAKMIP1,JAKMIP1,LOC285484	1993,1993,2084
chr2:232824864-232825342	chr2	+	232825181	232825255	True	NM_024409,NM_152383	chr2,chr2	-,+	NPPC,DIS3L2	-34222,1037
chr15:78529620-78529981	chr15	+	78529677	78529935	True	NM_015162,NM_018602,NM_001199377	chr15,chr15,chr15	-,+,-	ACSBG1,DNAJA4,ACSBG1	-2628,26551,-2628
chr11:18474085-18475362	chr11	+	18474109	18475138	True	NM_144972,NM_001144071,NM_006292	chr11,chr11,chr11	+,+,-	LDHAL6A,LDHAL6A,TSG101	2235,2235,73408
chr1:104663828-104665217	chr1	+	104663936	104665144	True	NM_001008221,NR_033990	chr1,chr1	-,+	AMY1A,LOC100129138	-424863,-48349
chr16:23690399-23690654	chr16	+	23690454	23690644	True	NM_005030,NM_033266	chr16,chr16	+,-	PLK1,ERN2	-304,34227
chr3:196160128-196160647	chr3	+	196160361	196160515	True	NM_001105573,NM_015562	chr3,chr3	+,-	FBXO45,UBXN7	135209,-1016
chr7:150435181-150435437	chr7	+	150435189	150435485	True	NM_001101311,NM_018384	chr7,chr7	-,+	TMEM176B,GIMAP5	62186,-804
chr22:36021141-36022944	chr22	+	36021209	36022781	True	NM_203377,NM_030641,NM_203378,NM_005368	chr22,chr22,chr22,chr22	-,+,-,-	MB,APOL6,MB,MB	-1808,21642,-7654,-7825
chr2:27007235-27008232	chr2	+	27007640	27008098	True	NM_001029881,NM_001809,NM_001042426	chr2,chr2,chr2	-,+,+	CIB4,CENPA,CENPA	-143429,783,784
chr7:92209895-92211485	chr7	+	92209974	92211220	True	NR_026902,NM_152789,NM_001040057,NR_034169	chr7,chr7,chr7,chr7	+,-,-,-	MGC16142,FAM133B,FAM133B,LOC728066	-42236,8536,8536,8526
chr5:61695485-61696285	chr5	+	61695755	61695988	True	NM_014473,NM_016338	chr5,chr5	-,+	DIMT1L,IPO11	3809,12584
chr5:78810723-78812416	chr5	+	78810770	78811797	True	NM_004272,NM_001114393	chr5,chr5	-,+	HOMER1,PAPD4	-1070,96445
chr16:2392148-2392859	chr16	+	2392248	2392883	True	NR_003574,NM_001089	chr16,chr16	+,-	ABCA17P,ABCA3	-1376,-1501
chr16:28305924-28306708	chr16	+	28305941	28306659	True	NM_001024401,NM_015171	chr16,chr16	+,-	SBK1,XPO6	-2152,-82751
chr16:1402396-1403683	chr16	+	1402435	1403324	True	NM_032520,NM_001001410	chr16,chr16	+,-	GNPTG,C16orf42	-593,-562
chr8:21882296-21882525	chr8	+	21882388	21882536	True	NM_024815,NM_182795	chr8,chr8	-,+	NUDT18,NPM2	84446,-85
chr10:82045878-82047405	chr10	+	82045878	82047273	True	NM_000429,NM_032372	chr10,chr10	-,+	MAT1A,DYDC2	2218,69284
chr1:151003757-151005111	chr1	+	151003957	151004372	True	NM_138278,NM_001159642,NM_018379	chr1,chr1,chr1	+,+,-	BNIPL,BNIPL,FAM63A	4656,4656,-23103
chr12:31947237-31948162	chr12	+	31947397	31948048	True	NM_001135863,NM_001013699	chr12,chr12	+,-	METTL20,H3F3C	-134853,-2222
chr22:24092172-24092914	chr22	+	24092183	24092892	True	NM_013378,NM_021916,NM_182520	chr22,chr22,chr22	-,-,+	VPREB3,ZNF70,C22orf15	3795,444,12315
chr6:87796104-87796719	chr6	+	87796104	87796164	True	NM_000735,NM_015021	chr6,chr6	-,+	CGA,ZNF292	8710,69104
chr7:100287303-100288489	chr7	+	100287384	100288516	True	NM_005273,NM_005837,NM_022574	chr7,chr7,chr7	+,+,-	GNB2,POP7,GIGYF1	-16072,15159,-514
chr20:50383902-50384282	chr20	+	50383997	50384121	True	NM_006045,NM_014484	chr20,chr20	-,+	ATP9A,MOCS3	837,-808685
chr14:24838976-24839257	chr14	+	24839130	24839216	True	NM_001198966,NM_001198967,NM_001198965,NM_006871,NM_004554,NM_001136022	chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,-,+,+	NFATC4,NFATC4,NFATC4,RIPK3,NFATC4,NFATC4	-879,-3036,-1955,-29888,-1955,-3036
chr19:52410911-52411555	chr19	+	52411047	52411273	True	NM_023074,NM_001031721	chr19,chr19	-,+	ZNF649,ZNF613	-2742,19414
chr17:18952427-18952716	chr17	+	18952462	18952732	True	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	78049,-2126
chr17:18952427-18952716	chr17	-	19028437	19028707	False	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	2074,-78101
chr2:7027660-7029041	chr2	+	7027723	7028985	True	NM_207315,NM_080657	chr2,chr2	-,+	CMPK2,RSAD2	-21787,-9979
chr8:87534886-87536109	chr8	+	87534917	87535701	True	NM_016033,NM_003909	chr8,chr8	-,+	FAM82B,CPNE3	-13908,-8312
chr4:4284440-4285169	chr4	+	4284563	4285218	True	NM_017816,NM_145291,NM_001145725	chr4,chr4,chr4	-,+,-	LYAR,ZBTB49,LYAR	6730,6705,6582
chr7:127293065-127294069	chr7	+	127293064	127294115	True	NM_006193,NM_014390	chr7,chr7	-,+	PAX4,SND1	-37284,-915
chr9:131133616-131133876	chr9	+	131133630	131133920	True	NR_029837,NM_030914,NM_001135947	chr9,chr9,chr9	-,+,+	MIR219-2,URM1,URM1	21123,-83,-83
chr4:87770780-87772303	chr4	+	87770783	87772111	True	NM_001166693,NM_197965	chr4,chr4	+,-	AFF1,SLC10A6	84042,-367
chr8:25040104-25040818	chr8	+	25040176	25040724	True	NM_024940,NM_006158	chr8,chr8	+,-	DOCK5,NEFL	1562,-226045
chr1:54619653-54619893	chr1	+	54619671	54619861	True	NM_201546,NM_016491	chr1,chr1	-,+	CDCP2,MRPL37	-228,45978
chr6:12012780-12013121	chr6	+	12012980	12013170	True	NM_032744,NM_002114	chr6,chr6	-,+	C6orf105,HIVEP1	-233700,-307
chr2:30375240-30375925	chr2	+	30375340	30375731	True	NM_004304,NM_001127399,NM_016061,NM_001127401,NM_001127400	chr2,chr2,chr2,chr2,chr2	-,+,+,+,+	ALK,YPEL5,YPEL5,YPEL5,YPEL5	-230863,-5649,-5649,-5649,-5649
chrX:48555560-48555861	chrX	+	48555773	48555907	True	NM_013271,NM_003173	chrX,chrX	-,+	PCSK1N,SUV39H1	138103,-693
chr17:66034382-66035000	chr17	+	66034565	66034737	True	NM_002266,NM_181656	chr17,chr17	+,-	KPNA2,C17orf58	-2776,-44800
chr18:2654924-2655261	chr18	+	2654923	2655203	True	NR_033754,NM_015295	chr18,chr18	-,+	LOC645158,SMCHD1	-1692,682
chrX:100872284-100872628	chrX	+	100872471	100872677	True	NM_019007,NM_001009584,NM_001184768,NR_033670,NM_016607,NM_177948,NM_177947,NR_033669	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,+,+,+,-	ARMCX6,ARMCX6,ARMCX6,ARMCX6,ARMCX3,ARMCX3,ARMCX3,ARMCX6	364,364,364,364,5442,5673,5442,364
chr10:120632286-120632559	chr10	+	120632305	120632488	True	NM_199461,NM_153810	chr10,chr10	+,-	NANOS1,C10orf46	156739,-117547
chr12:96252139-96252522	chr12	+	96252164	96252520	True	NM_003095,NM_021229	chr12,chr12	+,-	SNRPF,NTN4	188,-67628
chr15:57670432-57672321	chr15	+	57670478	57672105	True	NM_032866,NR_015419	chr15,chr15	+,-	CGNL1,LOC145783	-1830,-459781
chr4:76815032-76815677	chr4	+	76815066	76815702	True	NM_001130017,NM_006239	chr4,chr4	+,-	ART3,PPEF2	116634,8029
chr2:210289208-210289904	chr2	+	210289232	210289931	True	NM_152519,NM_001039538	chr2,chr2	-,+	C2orf67,MAP2	746177,-512
chr17:36997777-36998012	chr17	+	36997819	36998058	True	NM_006148,NM_001080465	chr17,chr17	+,-	LASP1,C17orf98	28053,-177
chrX:151306531-151306735	chrX	+	151306582	151306648	True	NM_001204811,NM_001011550,NM_021048,NM_001011543	chrX,chrX,chrX,chrX	-,+,-,-	MAGEA10-MAGEA5,MAGEA4,MAGEA10,MAGEA10	427,-219873,427,427
chr10:79788630-79789053	chr10	+	79788642	79789008	True	NM_001026,NM_007055,NM_001142282,NM_001142283,NM_001142284,NM_033022,NM_001142285	chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,-,+,+,+,+,+	RPS24,POLR3A,RPS24,RPS24,RPS24,RPS24,RPS24	4509,340,4509,4509,4509,4509,4509
chr17:72575316-72576489	chr17	+	72575342	72576536	True	NM_152460,NM_001115152	chr17,chr17	+,-	C17orf77,CD300LD	4520,11884
chr12:54518559-54519707	chr12	+	54518675	54519591	True	NR_026656,NR_026658	chr12,chr12	+,-	LOC400043,LOC100240735	263,-43068
chr1:161520403-161521654	chr1	+	161520907	161521424	True	NM_000569,NM_001127593,NM_001127592,NM_001127595,NM_001127596,NM_002155	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,+	FCGR3A,FCGR3A,FCGR3A,FCGR3A,FCGR3A,HSPA6	-1089,-494,-1089,-494,-494,-26922
chr11:2891792-2892515	chr11	+	2891841	2892341	True	NR_024627,NM_000076	chr11,chr11	+,-	KCNQ1DN,CDKN1C	-629,14704
chr13:51409469-51410530	chr13	+	51409598	51410347	True	NM_198989,NM_024570	chr13,chr13	-,+	DLEU7,RNASEH2B	7588,73466
chr4:69207904-69209213	chr4_ctg9_hap1	+	37883	38752	False	NM_014058,NM_133370,NM_001031732	chr4_ctg9_hap1,chr4_ctg9_hap1,chr4_ctg9_hap1	+,-,-	TMPRSS11E,YTHDC1,YTHDC1	104336,7053,7053
chr4:69207904-69209213	chr4	+	69207961	69208830	True	NM_014058,NM_133370,NM_001031732	chr4,chr4,chr4	+,-,-	TMPRSS11E,YTHDC1,YTHDC1	104336,7053,7053
chr12:3983720-3984795	chr12	+	3983729	3984679	True	NM_019854,NM_020367	chr12,chr12	+,-	PRMT8,PARP11	-383365,-1121
chr17:3706489-3707193	chr17	+	3706494	3706889	True	NM_031965,NM_002208	chr17,chr17	+,-	GSG2,ITGAE	-79355,-1957
chr22:18507984-18508213	chr22	+	18508009	18508213	True	NM_001136004,NM_015241,NR_024417,NM_001122731	chr22,chr22,chr22,chr22	-,-,+,-	MICAL3,MICAL3,FLJ41941,MICAL3	-684,-684,3937,-684
chr19:4558435-4559007	chr19	+	4558540	4558934	True	NM_152362,NM_032108	chr19,chr19	+,-	TNFAIP8L1,SEMA6B	80592,887
chr16:29626464-29626780	chr16	+	29626481	29626715	True	NR_002593,NM_001030288	chr16,chr16	-,+	SLC7A5P1,SPN	-1443,47584
chr16:29626464-29626780	chr16	+	21533375	21533431	False	NM_001077180,NR_002594	chr16,chr16	+,-	METTL9,SLC7A5P2	77424,-1610
chr12:102471248-102471825	chr12	+	102471303	102471834	True	NM_017915,NM_016053	chr12,chr12	+,-	C12orf48,CCDC53	42121,-15404
chr2:74531269-74532072	chr2	+	74531275	74532115	True	NR_024463,NM_021196	chr2,chr2	+,-	LOC100189589,SLC4A5	80729,10087
chr10:74714323-74715398	chr10	+	74714583	74715373	True	NM_152635,NM_032562	chr10,chr10	+,-	OIT3,PLA2G12B	-61295,-73
chr19:50371807-50372093	chr19	+	50371826	50371916	True	NM_032375,NM_024682,NM_007254,NM_001168222,NM_001098633,NM_001098632	chr19,chr19,chr19,chr19,chr19,chr19	-,+,-,+,-,-	AKT1S1,TBC1D17,PNKP,TBC1D17,AKT1S1,AKT1S1	8712,8765,-1004,8765,8746,8778
chr6:130761731-130762769	chr6	+	130761767	130762754	True	NM_052913,NM_001017373	chr6,chr6	+,-	TMEM200A,SAMD3	-3557,-217668
chr19:910486-910840	chr19	+	910668	910782	True	NM_138774,NM_032551	chr19,chr19	-,+	C19orf22,KISS1R	2493,6559
chr19:15385963-15386537	chr19	+	15386085	15386485	True	NM_014299,NM_058243,NM_033025	chr19,chr19,chr19	-,-,+	BRD4,BRD4,SYDE1	4827,4827,-167924
chr14:24775524-24775844	chr14	+	24775678	24775886	True	NM_001164692,NM_174913,NM_001136050,NM_019839,NM_138452,NM_001143919,NM_181657,NM_014430	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,+,-,+,-,+,+,-	LTB4R2,C14orf21,DHRS1,LTB4R2,DHRS1,LTB4R,LTB4R,CIDEB	3470,-6631,-6639,3470,-7012,4818,6426,4740
chr8:8023206-8023493	chr8	+	8023242	8023356	True	NR_031689,NR_024362	chr8,chr8	-,+	MIR548I3,FLJ10661	-76631,62735
chr8:8023206-8023493	chr8	-	12357340	12357454	False	NR_026789,NM_001137610	chr8,chr8	+,-	FAM66A,FAM86B2	-137863,-63488
chr11:66334492-66334735	chr11	+	66334491	66334789	True	NM_003793,NM_001104	chr11,chr11	-,+	CTSF,ACTN3	1316,-20151
chr14:23527991-23528371	chr14	+	23528004	23528268	True	NM_144985,NM_022478,NM_001099780	chr14,chr14,chr14	-,-,+	CDH24,CDH24,PSMB11	-1257,-1257,-16679
chr3:64200545-64202102	chr3	+	64200623	64202071	True	NM_198859,NM_001128149	chr3,chr3	-,+	PRICKLE2,ATXN7	9111,-247255
chr14:24403019-24403506	chr14	+	24403039	24403329	True	NR_024081,NM_021004	chr14,chr14	-,+	C14orf165,DHRS4	500,19635
chr16:56710192-56710444	chr16	+	56710220	56710308	True	NM_005952,NM_005950,NR_003669,NM_005951	chr16,chr16,chr16,chr16	+,-,+,+	MT1X,MT1G,MT1IP,MT1H	6073,-8243,-622,-6545
chr7:140901194-140902618	chr7	+	140901474	140902636	True	NM_053035,NM_001195278	chr7,chr7	-,+	MRPS33,LOC100131199	-186693,-127493
chrX:107980429-107981146	chrX	+	107980434	107981180	True	NM_033380,NM_003604	chrX,chrX	+,-	COL4A5,IRS4	-297331,-827
chrX:113288276-113289378	chrX	+	113288855	113289283	True	NM_000868,NM_000640	chrX,chrX	+,-	HTR2C,IL13RA2	529267,962980
chr6:36354027-36354510	chr6	+	36354148	36354470	True	NM_016135,NM_173562	chr6,chr6	-,+	ETV7,KCTD20	1047,56073
chr11:82611375-82612263	chr11	+	82611722	82612218	True	NM_199418,NM_145018,NM_005040	chr11,chr11,chr11	-,+,-	PRCP,C11orf82,PRCP	-165,518,-165
chr16:2275766-2276822	chr16	+	2276106	2276737	True	NM_004424,NM_001374,NM_001042371	chr16,chr16,chr16	+,+,-	E4F1,DNASE1L2,PGP	-2591,9730,-11284
chr1:236679647-236680222	chr1	+	236679994	236680204	True	NM_201545,NM_201544,NM_201543,NR_034040,NM_006499	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	LGALS8,LGALS8,LGALS8,LOC100287902,LGALS8	1309,6822,6534,7654,6534
chr19:56441906-56442929	chr19	+	56442182	56442763	True	NM_176810,NM_176811	chr19,chr19	-,+	NLRP13,NLRP8	989,16434
chr2:170573649-170574989	chr2	+	170573671	170574899	True	NM_001085447,NM_144711	chr2,chr2	-,+	C2orf77,KLHL23	-22740,15456
chr22:24031392-24032491	chr22	+	24031574	24032432	True	NM_153615,NR_024448	chr22,chr22	+,-	RGL4,LOC91316	615,27228
chr9:127964416-127966333	chr9	+	127965272	127965991	True	NM_002721,NM_005833,NM_001174152,NM_001174153	chr9,chr9,chr9,chr9	-,+,+,+	PPP6C,RABEPK,RABEPK,RABEPK	-13054,-2461,-2502,-2502
chr13:45151208-45151426	chr13	+	45151239	45151317	True	NM_001010897,NM_183422	chr13,chr13	+,-	SERP2,TSC22D1	-203312,-538
chr17:4677922-4678427	chr17	+	4678228	4678452	True	NM_001144939,NM_003963	chr17,chr17	-,+	VMO1,TM4SF5	11327,-3092
chr10:82173315-82175260	chr10	+	82173354	82175123	True	NR_024572,NM_032333,NM_138812	chr10,chr10,chr10	+,+,-	C10orf58,C10orf58,DYDC1	179,-5170,-56854
chr12:49111129-49111693	chr12	+	49111305	49111684	True	NM_001240,NR_029448,NR_029449	chr12,chr12,chr12	-,+,+	CCNT1,LOC255411,LOC255411	-524,9533,9533
chr5:168042516-168043382	chr5	+	168042690	168043347	True	NM_024594,NR_031721	chr5,chr5	-,+	PANK3,MIR103-1AS	-36076,-54834
chr20:33459826-33460402	chr20	+	33459977	33460279	True	NM_178026,NM_018677,NM_001076552,NR_028046	chr20,chr20,chr20,chr20	-,+,+,+	GGT7,ACSS2,ACSS2,ACSS2	432,4048,4048,2486
chr8:16857651-16858191	chr8	+	16857717	16858169	True	NM_181723,NM_019851	chr8,chr8	+,-	EFHA2,FGF20	26577,1563
chr10:118034701-118035113	chr10	+	118034700	118035055	True	NM_005264,NM_145793,NM_198515,NM_001145453	chr10,chr10,chr10,chr10	-,-,+,-	GFRA1,GFRA1,C10orf96,GFRA1	-1574,-2881,48884,-1904
chr12:111052950-111054179	chr12	+	111053083	111053914	True	NM_139283,NM_001082538,NM_001082537,NM_024549,NM_001173976,NM_001173975	chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,+,+,+	PPTC7,TCTN1,TCTN1,TCTN1,TCTN1,TCTN1	-32019,-1302,-1302,-1302,-1302,-1222
chr11:77900196-77900658	chr11	+	77900243	77900682	True	NM_001029859,NM_020798	chr11,chr11	-,+	KCTD21,USP35	-579,-436
chr1:236031531-236032086	chr1	+	236031542	236031934	True	NM_000081,NM_003272	chr1,chr1	-,+	LYST,GPR137B	-1322,273897
chr7:155753291-155753662	chr7	+	155753291	155753709	True	NM_000193,NM_053043	chr7,chr7	-,+	SHH,RBM33	-148324,-316141
chr10:13279371-13280356	chr10	+	13279595	13280384	True	NM_145314,NM_182751	chr10,chr10	-,+	UCMA,MCM10	-3267,-76092
chr14:21738664-21739655	chr14	+	21738893	21739693	True	NM_001077443,NM_001077442,NM_020366,NM_004500,NM_031314	chr14,chr14,chr14,chr14,chr14	-,-,+,-,-	HNRNPC,HNRNPC,RPGRIP1,HNRNPC,HNRNPC	-1255,-1255,16442,-1255,-1255
chr11:76382332-76383688	chr11	+	76382389	76383527	True	NM_015516,NM_001128922,NM_005512	chr11,chr11,chr11	+,-,-	TSKU,LRRC32,LRRC32	110757,-598,-1345
chr19:53872773-53873068	chr19	+	53872785	53872968	True	NM_033341,NR_003699	chr19,chr19	-,+	BIRC8,ZNF525	-77910,-3877
chr4:37892942-37893223	chr4	+	37893170	37893232	True	NM_001085400,NM_015173	chr4,chr4	-,+	RELL1,TBC1D1	-205171,-501
chr16:50728607-50730145	chr16	+	50728650	50729935	True	NM_022162,NM_182854	chr16,chr16	+,-	NOD2,SNX20	1114,-13386
chrX:140678165-140678616	chrX	+	140678501	140678663	True	NM_013453,NM_145662	chrX,chrX	+,+	SPANXA1,SPANXA2	-693,-717
chrX:140678165-140678616	chrX	-	140672031	140672193	False	NM_013453,NM_145662	chrX,chrX	-,-	SPANXA1,SPANXA2	693,717
chrX:140678165-140678616	chrX	-	140335821	140335881	False	NM_022661,NM_145664	chrX,chrX	-,+	SPANXC,SPANXB2	815,-239111
chrX:140678165-140678616	chrX	+	140085585	140085645	False	NM_032461,NR_031725,NM_145664,NM_139019	chrX,chrX,chrX,chrX	+,-,+,+	SPANXB1,MIR320D2,SPANXB2,SPANXF1	-880,-77201,-880,-880
chrX:140678165-140678616	chrX	+	140097590	140097650	False	NM_032461,NR_031725,NM_145664,NM_139019	chrX,chrX,chrX,chrX	+,-,+,+	SPANXB1,MIR320D2,SPANXB2,SPANXF1	-880,-89206,-880,-880
chr8:145017293-145017620	chr8	+	145017299	145017653	True	NM_000837,NR_030383,NM_201384,NM_201381,NM_201380,NM_201383,NM_201382	chr8,chr8,chr8,chr8,chr8,chr8,chr8	+,-,-,-,-,-,-	GRINA,MIR661,PLEC,PLEC,PLEC,PLEC,PLEC	46572,1844,-3541,1302,7441,-607,507
chr6:31591554-31592062	chr6	+	31591881	31591965	True	NM_004638,NM_080686,NM_001098534,NR_002971,NM_001623,NM_032955,NM_004847	chr6,chr6,chr6,chr6,chr6,chr6,chr6	+,+,-,+,+,+,+	PRRC2A,PRRC2A,BAG6,SNORA38,AIF1,AIF1,AIF1	-3487,-3487,28263,-1081,-8904,-8148,-8943
chr6:31591554-31592062	chr6_mann_hap4	+	2934765	2934849	False	NM_004638,NR_002971,NM_080686,NM_001098534	chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4	+,+,+,-	PRRC2A,SNORA38,PRRC2A,BAG6	-3487,-1084,-3487,28268
chr17:61600151-61600469	chr17	+	61600246	61600517	True	NM_001915,NM_173092,NM_030779	chr17,chr17,chr17	-,+,+	CYB561,KCNH6,KCNH6	-76524,177,177
chr8:21785147-21785562	chr8	+	21785405	21785600	True	NM_003974,NM_015024	chr8,chr8	-,+	DOK2,XPO7	-14200,-8287
chr3:39522175-39523997	chr3	+	39522350	39523866	True	NM_001171174,NR_003090	chr3,chr3	-,+	CX3CR1,MOBP	-199124,-13332
chr17:28563578-28563964	chr17	+	28563639	28563998	True	NR_029945,NM_001045	chr17,chr17	+,-	MIR423,SLC6A4	-119593,-685
chr7:138935772-138936721	chr7	+	138936065	138936763	True	NM_173569,NM_024625	chr7,chr7	+,-	UBN2,ZC3HAV1	-19886,-141600
chrX:48755500-48756345	chrX	+	48755581	48756032	True	NM_001032384,NM_001032381,NM_005834,NM_001032383,NM_001032382,NM_005710,NM_001167947,NM_001167989,NM_001167990,NM_144495,NM_001167992	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,-,+,+,+,-,+,+,+,+	PQBP1,PQBP1,TIMM17B,PQBP1,PQBP1,PQBP1,TIMM17B,PQBP1,PQBP1,PQBP1,PQBP1	-93,-437,-155,-437,-437,-93,-155,-437,-419,-437,41
chr16:67019835-67021514	chr16	+	67020544	67021220	True	NM_173815,NR_024525	chr16,chr16	+,-	CES4A,FAM96B	1271,-52224
chr1:41247212-41247989	chr1	+	41247283	41247937	True	NM_004700,NM_172163,NM_133467	chr1,chr1,chr1	+,+,-	KCNQ4,KCNQ4,CITED4	1746,1746,80131
chr2:74213242-74213563	chr2	+	74213375	74213611	True	NM_080918,NM_001035505	chr2,chr2	+,-	DGUOK,BOLA3	-59473,161478
chr20:60813240-60813451	chr20	+	60813243	60813391	True	NM_007232,NM_014835,NM_144498	chr20,chr20,chr20	-,+,+	HRH3,OSBPL2,OSBPL2	-17920,188,188
chr19:45178169-45179623	chr19	+	45178254	45179404	True	NM_001127893,NM_020219,NR_027754	chr19,chr19,chr19	+,+,-	CEACAM19,CEACAM19,CEACAM22P	-3581,-3581,-118104
chr10:75681639-75683387	chr10	+	75681771	75682871	True	NM_002658,NM_001001791	chr10,chr10	+,-	PLAU,C10orf55	-10968,-74
chr8:114374591-114375759	chr8	+	114374712	114375765	True	NR_031745,NM_198124	chr8,chr8	+,-	MIR2053,CSMD3	-719041,13668
chr21:47649727-47649965	chr21	+	47649760	47650012	True	NM_001145436,NM_002340,NR_002776,NM_001001438,NM_001145437	chr21,chr21,chr21,chr21,chr21	-,-,+,-,-	LSS,LSS,MCM3AP-AS1,LSS,LSS	-1022,-1022,-653,-1022,-1022
chr17:41908517-41909231	chr17	+	41908647	41908927	True	NR_003562,NM_001168324,NM_001932	chr17,chr17,chr17	-,+,-	MPP3,CD300LG,MPP3	1670,15588,1670
chr3:100439747-100440714	chr3	+	100439988	100440598	True	NM_015429,NM_001195478	chr3,chr3	-,+	ABI3BP,TFG	271786,-11665
chr6:106537989-106538496	chr6	+	106538005	106538519	True	NM_182907,NM_004849,NM_001198	chr6,chr6,chr6	+,-,+	PRDM1,ATG5,PRDM1	8295,235226,-3861
chrX:65423004-65423374	chrX	+	65423061	65423413	True	NM_014799,NM_007268	chrX,chrX	+,-	HEPH,VSIG4	-39014,-163094
chr19:54746611-54746848	chr19	+	54746619	54746711	True	NM_001013,NM_024318	chr19,chr19	+,-	RPS9,LILRA6	-41944,63
chr19:54746611-54746848	chr19	+	54726867	54726959	False	NM_001013,NM_001081450,NM_006864	chr19,chr19,chr19	+,-,-	RPS9,LILRB3,LILRB3	-22192,50,50
chr12:71004370-71005159	chr12	+	71004489	71005021	True	NM_002837,NM_014505	chr12,chr12	-,+	PTPRB,KCNMB4	-865,-244488
chr6:109805761-109806227	chr6	+	109805808	109806181	True	NM_014797,NM_003080,NM_001164313	chr6,chr6,chr6	-,+,-	ZBTB24,SMPD2,ZBTB24	-1368,-43937,-1368
chr21:37852240-37853125	chr21	+	37852269	37853149	True	NM_005441,NM_144492,NM_001146079	chr21,chr21,chr21	+,-,-	CHAF1B,CLDN14,CLDN14	-94631,-67,-67
chr20:42218595-42218916	chr20	+	42218622	42218906	True	NM_016004,NM_001008901	chr20,chr20	+,-	IFT52,GTSF1L	672,136786
chr11:49215564-49217560	chr11	+	49215904	49217328	True	NM_001014986,NR_027044	chr11,chr11	-,+	FOLH1,LOC440040	12952,362751
chr11:49215564-49217560	chr11	-	89384167	89384225	False	NM_153696,NM_001143837	chr11,chr11	+,-	FOLH1B,NOX4	8239,-61388
chr2:218996473-218997929	chr2	+	218996517	218997921	True	NM_000634,NM_001557,NM_001168298	chr2,chr2,chr2	-,+,+	CXCR1,CXCR2,CXCR2	33845,-5832,-6555
chr1:113258129-113258438	chr1	+	113258189	113258391	True	NM_001042678,NM_001042679,NM_175744,NM_001004440,NM_005167,NM_182759	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,+	RHOC,RHOC,RHOC,FAM19A3,PPM1J,FAM19A3	-8164,-8511,-8164,4797,-239,4797
chr15:43027804-43028241	chr15	+	43027890	43028288	True	NM_020759,NM_138477	chr15,chr15	+,-	STARD9,CDAN1	-160084,1179
chr1:201253429-201253912	chr1	+	201253459	201253845	True	NM_000364,NM_000299,NM_001005337	chr1,chr1,chr1	-,+,+	TNNT2,PKP1,PKP1	93010,-930,-930
chr2:73437141-73438688	chr2	+	73437236	73438580	True	NM_006062,NM_032319,NM_001134462	chr2,chr2,chr2	+,-,+	SMYD5,C2orf7,NOTO	2785,21826,-7901
chr7:151723133-151724054	chr7	+	151723208	151724028	True	NM_022087,NM_016203	chr7,chr7	+,-	GALNT11,PRKAG2	-481,-148892
chr17:35659432-35660502	chr17	+	35659526	35660481	True	NM_198837,NM_198838,NM_173625	chr17,chr17,chr17	-,-,+	ACACA,ACACA,C17orf78	-2834,-2834,72503
chr3:161219342-161219813	chr3	+	161219363	161219642	True	NM_001080440,NM_001040100	chr3,chr3	+,-	OTOL1,C3orf57	-4825,-129492
chr7:64145804-64147196	chr7	+	64146123	64147128	True	NM_001130022,NM_016220	chr7,chr7	-,+	ZNF680,ZNF107	-122618,-19663
chr9:86525659-86526072	chr9	+	86525692	86525958	True	NM_017576,NM_024945	chr9,chr9	-,+	KIF27,RMI1	10446,69678
chr9:86525659-86526072	chr9	-	88435417	88435686	False	NR_029410,NM_015239	chr9,chr9	+,-	LOC389765,AGTPBP1	-14563,-78473
chr4:170544961-170546101	chr4	+	170545055	170545769	True	NM_012224,NM_173872,NM_001829	chr4,chr4,chr4	-,+,+	NEK1,CLCN3,CLCN3	-11277,-3399,-3399
chr7:148685950-148687499	chr7	+	148685986	148687470	True	NM_004911,NM_020781	chr7,chr7	-,+	PDIA4,ZNF398	38369,136037
chr16:69420115-69421012	chr16	+	69420547	69421021	True	NM_030579,NM_005652	chr16,chr16	+,-	CYB5B,TERF2	37476,-673
chr3:9941617-9942307	chr3	+	9941874	9942318	True	NM_032492,NM_001193380,NM_153480,NM_001199552,NM_153483	chr3,chr3,chr3,chr3,chr3	+,+,+,-,+	JAGN1,IL17RE,IL17RE,CIDEC,IL17RE	-9654,2193,2193,-19936,1977
chr7:5325014-5325498	chr7	+	5325204	5325340	True	NM_153247,NM_001040661,NM_001080495	chr7,chr7,chr7	+,+,-	SLC29A4,SLC29A4,TNRC18	-2694,-2694,137887
chr7:5325014-5325498	chr7	-	57014195	57014245	False	NR_036270,NR_026929,NR_036246	chr7,chr7,chr7	-,+,-	MIR4283-2,DKFZp434L192,MIR4283-1	9376,-450330,9376
chr7:5325014-5325498	chr7	+	63090796	63090846	False	NR_036270,NR_028349,NR_036246	chr7,chr7,chr7	+,-,+	MIR4283-2,LOC100287834,MIR4283-1	-9379,-231377,-9379
chr13:49724802-49725902	chr13	+	49725096	49725402	True	NM_014923,NM_030925	chr13,chr13	+,-	FNDC3A,CAB39L	-40706,250391
chr22:18922302-18922576	chr22	+	18922341	18922571	True	NM_001195226,NM_005675,NM_016335	chr22,chr22,chr22	-,+,-	PRODH,DGCR6,PRODH	1443,-28656,1545
chr22:18922302-18922576	chr22	-	20288511	20288655	False	NR_026919,NM_033257	chr22,chr22	+,-	LOC150197,DGCR6L	-94707,19023
chr17:6347146-6347375	chr17	+	6347207	6347333	True	NM_019013,NM_014336,NM_001033054,NM_001195228,NM_001033055	chr17,chr17,chr17,chr17,chr17	+,-,-,+,-	FAM64A,AIPL1,AIPL1,FAM64A,AIPL1	401,-8688,-8688,401,-8688
chr22:35537505-35538210	chr22	+	35537515	35538140	True	NM_001008494,NM_005368	chr22,chr22	+,-	ISX,MB	-75436,475294
chr15:78832464-78832964	chr15	+	78832538	78832988	True	NM_001166694,NM_001102668,NM_002789,NM_001102667	chr15,chr15,chr15,chr15	-,+,+,+	CHRNA3,PSMA4,PSMA4,PSMA4	80699,-86,-86,-86
chr1:11108761-11109786	chr1	+	11109014	11109789	True	NM_006610,NM_007375,NM_139208	chr1,chr1,chr1	-,+,-	MASP2,TARDBP,MASP2	-1718,-36387,-1718
chr12:49503634-49503973	chr12	+	49503643	49503930	True	NM_005430,NM_018113	chr12,chr12	+,-	WNT1,LMBR1L	-131458,800
chr12:4555024-4556273	chr12	+	4555051	4556292	True	NM_020996,NM_001130862	chr12,chr12	-,+	FGF6,RAD51AP1	-271,91657
chr11:65605213-65606791	chr11	+	65605303	65606464	True	NM_005507,NM_152760	chr11,chr11	-,+	CFL1,SNX32	19403,-3947
chr3:38220262-38221390	chr3	+	38220279	38221272	True	NM_005109,NR_024024	chr3,chr3	+,-	OXSR1,ACAA1	-13311,-41546
chr5:151066710-151067483	chr5	+	151066874	151067396	True	NM_003118,NM_005754	chr5,chr5	-,+	SPARC,G3BP1	-357,84079
chrX:48644404-48644636	chrX	+	48644475	48644543	True	NM_002049,NM_013271	chrX,chrX	+,-	GATA1,PCSK1N	438,49467
chr13:26624073-26624335	chr13	+	26624083	26624250	True	NM_001260,NM_001007538	chr13,chr13	+,-	CDK8,SHISA2	204505,998
chr3:148575658-148576079	chr3	+	148575711	148576084	True	NM_001870,NM_003071	chr3,chr3	+,-	CPA3,HLTF	6958,228314
chr4:185136232-185137019	chr4	+	185136363	185137067	True	NM_020225,NM_153343	chr4,chr4	+,-	STOX2,ENPP6	-309907,2097
chr14:53018049-53018403	chr14	+	53018250	53018448	True	NM_020784,NM_001160047,NM_001099652	chr14,chr14,chr14	-,-,+	TXNDC16,TXNDC16,GPR137C	903,903,1417
chr16:72096362-72097733	chr16	+	72096467	72097599	True	NM_020995,NM_001126102,NM_017853,NM_005143	chr16,chr16,chr16,chr16	+,+,-,+	HPR,HP,TXNL4B,HP	85,-8010,30000,-8010
chrX:147582518-147582767	chrX	+	147582617	147582749	True	NM_002025,NR_024503,NM_001169124,NM_001169125,NM_001169122,NM_001169123	chrX,chrX,chrX,chrX,chrX,chrX	+,-,+,+,+,+	AFF2,FMR1-AS1,AFF2,AFF2,AFF2,AFF2	-529,-578941,-529,-529,-529,-529
chr3:25709663-25710943	chr3	+	25709723	25710801	True	NM_001068,NM_001145391	chr3,chr3	-,+	TOP2B,OXSM	-3935,120761
chr10:104675564-104676729	chr10	+	104676032	104676543	True	NM_199077,NM_017649,NM_000102,NM_199076	chr10,chr10,chr10,chr10	+,+,-,+	CNNM2,CNNM2,CYP17A1,CNNM2	1570,1570,-78742,1570
chr4:9555510-9556213	chr4	+	9555739	9555820	True	NR_031688,NM_001040448	chr4,chr4	-,+	MIR548I2,DEFB131	2174,-109534
chr17:901478-901919	chr17	+	901566	901896	True	NM_013337,NM_022463	chr17,chr17	+,-	TIMM22,NXN	-1268,-18556
chr9:136324508-136325121	chr9	+	136324516	136325044	True	NM_017586,NM_001145099,NM_001135775	chr9,chr9,chr9	+,-,+	C9orf7,SLC2A6,C9orf7	42,19282,42
chr15:37394511-37394816	chr15	+	37394513	37394861	True	NM_170674,NM_170675,NM_170676,NM_170677,NM_172315,NM_172316,NM_002399,NM_032499	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,-,-,-,-,-,+	MEIS2,MEIS2,MEIS2,MEIS2,MEIS2,MEIS2,MEIS2,C15orf41	-1809,-1809,-1809,-1809,-4010,-2916,-1013,-461765
chr4:159594378-159595548	chr4	+	159594472	159595120	True	NM_001008393,NM_004453	chr4,chr4	-,+	C4orf46,ETFDH	-1270,-1255
chrX:53197515-53198904	chrX	+	53198197	53198957	True	NM_022117,NM_001146702	chrX,chrX	+,-	TSPYL2,KDM5C	-86707,55711
chr1:225160258-225160802	chr1	+	225160643	225160850	True	NM_144989,NM_002296	chr1,chr1	+,-	DNAH14,LBR	-43331,455022
chr15:67541163-67541394	chr15	+	67541163	67541297	True	NM_001031715,NM_022784,NM_024666	chr15,chr15,chr15	+,+,-	IQCH,IQCH,AAGAB	5840,5840,5831
chr1:163038579-163039182	chr1	+	163038632	163039222	True	NM_001113380,NM_001113381,NM_001102445,NM_001195303,NM_005613	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	RGS4,RGS4,RGS4,RGS5,RGS4	2472,16,-287,133453,12
chr3:10149916-10151595	chr3	+	10149937	10151025	True	NM_173472,NM_018462,NM_001164839	chr3,chr3,chr3	-,+,-	C3orf24,C3orf10,C3orf24	-22,6307,-22
chr12:117538127-117539197	chr12	+	117538249	117539166	True	NM_001168325,NM_153348,NM_017899,NR_031766	chr12,chr12,chr12,chr12	-,+,-,-	TESC,FBXW8,TESC,TESC	-998,-189539,-998,-998
chr10:95354378-95354616	chr10	+	95354388	95354628	True	NM_006744,NM_006204	chr10,chr10	-,+	RBP4,PDE6C	6415,17716
chr5:10622790-10623377	chr5	+	10622793	10623331	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-58409,138106
chr19:49124629-49125232	chr19	+	49124779	49125199	True	NM_001204159,NM_001204158,NM_001204160,NM_000979,NM_017708,NM_020126	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,-,-,+	SPHK2,SPHK2,SPHK2,RPL18,FAM83E,SPHK2	-2039,-2282,3009,-2346,-8085,-2282
chr18:44550624-44551592	chr18	+	44550865	44551431	True	NM_145653,NM_001100817,NM_031303	chr18,chr18,chr18	-,-,+	TCEB3C,TCEB3CL,KATNAL2	-331,-567,-24135
chr18:44550624-44551592	chr18	+	44556780	44557346	False	NM_145653,NM_001100817,NM_016427,NM_031303	chr18,chr18,chr18,chr18	-,-,-,+	TCEB3C,TCEB3CL,TCEB3B,KATNAL2	-331,-567,4692,-30050
chr18:44550624-44551592	chr18	+	44544938	44545504	False	NM_145653,NM_001100817,NM_031303	chr18,chr18,chr18	-,-,+	TCEB3C,TCEB3CL,KATNAL2	5080,-567,-18208
chr2:27865729-27866765	chr2	+	27865939	27866693	True	NR_026735,NM_024584	chr2,chr2	+,-	GPN1,CCDC121	-14135,-14041
chr22:20749209-20749798	chr22	+	20749405	20749676	True	NM_153334,NR_003253,NM_003426	chr22,chr22,chr22	-,+,+	SCARF2,ZNF74,ZNF74	42521,-977,-977
chr16:89722959-89723362	chr16	+	89722970	89723234	True	NM_002768,NM_001083314,NM_153025	chr16,chr16,chr16	-,-,+	CHMP1A,CHMP1A,C16orf55	945,945,975
chr2:131110644-131111124	chr2	+	131110734	131111138	True	NM_032357,NM_001142370,NM_014369	chr2,chr2,chr2	-,+,+	CCDC115,PTPN18,PTPN18	-10812,2441,2441
chr7:150654359-150654904	chr7	+	150654382	150654558	True	NM_172057,NM_000603,NM_001204798	chr7,chr7,chr7	-,+,-	KCNH2,NOS3,KCNH2	-1465,33585,-1465
chrX:71262693-71263391	chrX	+	71262731	71263390	True	NR_002309,NM_001024455	chrX,chrX	+,-	RPS26P11,RGAG4	868,88418
chrX:100095646-100097533	chrX	+	100095761	100097559	True	NM_001325,NM_007052	chrX,chrX	+,-	CSTF2,NOX1	-20464,31831
chr22:30686513-30687351	chr22	+	30686665	30687397	True	NM_001037666,NM_001017437	chr22,chr22	-,+	GATSL3,CCDC157	-1049,65229
chr1:204380529-204380895	chr1	+	204380578	204380944	True	NM_001204171,NM_032833	chr1,chr1	+,-	MDM4,PPP1R15B	104562,50
chr10:105034955-105035697	chr10	+	105034990	105035616	True	NM_032727,NM_001011663	chr10,chr10	+,-	INA,PCGF6	1303,75325
chr13:114565968-114566193	chr13	+	114566069	114566143	True	NM_000820,NR_024609	chr13,chr13	-,+	GAS6,FLJ44054	953,20466
chr7:65865156-65865765	chr7	+	65865493	65865753	True	NR_026873,NM_003596	chr7,chr7	-,+	NCRNA00174,TPST1	-98,-195292
chr11:62340556-62340781	chr11	+	62340599	62340797	True	NM_001404,NM_000327	chr11,chr11	-,+	EEF1G,ROM1	713,39415
chr10:103455336-103456132	chr10	+	103455421	103456159	True	NR_036114,NM_022039	chr10,chr10	+,-	MIR3158-1,FBXW4	-94298,-678
chr11:76476714-76477778	chr11	+	76476738	76477648	True	NM_015516,NR_024042	chr11,chr11	+,-	TSKU,GUCY2E	16636,-43905
chr12:54362167-54362494	chr12	+	54362169	54362467	True	NM_014212,NR_003716	chr12,chr12	+,-	HOXC11,HOTAIR	4442,98
chr7:155606966-155607227	chr7	+	155606966	155607250	True	NM_000193,NM_053043	chr7,chr7	-,+	SHH,RBM33	-1999,-169814
chr12:100592629-100592984	chr12	+	100592841	100593001	True	NM_022496,NR_024261,NR_031728	chr12,chr12,chr12	+,-,+	ACTR6,GOLGA2B,MIR1827	1572,-25720,-9232
chr10:27541315-27541657	chr10	+	27541319	27541473	True	NR_003525,NM_032844	chr10,chr10	-,+	LOC387646,MASTL	-84,-97617
chr1:42385011-42385899	chr1	+	42385141	42385883	True	NM_024503,NM_007102,NM_001127714	chr1,chr1,chr1	-,+,-	HIVEP3,GUCA2B,HIVEP3	-645,233208,-645
chr5:140798824-140799266	chr5	+	140798853	140799159	True	NM_032091,NM_032090,NM_018927,NM_032092,NM_032101,NM_005642,NM_018914,NR_001297,NM_018913	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,-,+,+,+	PCDHGA11,PCDHGA10,PCDHGB7,PCDHGA11,PCDHGB7,TAF7,PCDHGA11,PCDHGB8P,PCDHGA10	1377,-6161,-1644,1377,-1690,-98502,1377,6693,-6161
chr1:26349801-26350356	chr1	+	26349956	26350405	True	NM_001004434,NM_004455	chr1,chr1	-,+	SLC30A2,EXTL1	22249,-1736
chr16:23158654-23158861	chr16	+	23158726	23158876	True	NM_001039,NM_020718	chr16,chr16	+,-	SCNN1G,USP31	35163,1765
chr11:67418084-67418356	chr11	+	67418157	67418403	True	NM_007103,NM_080658	chr11,chr11	+,-	NDUFV1,ACY3	-43885,-27
chr20:23436373-23437734	chr20	+	23436417	23437665	True	NM_130794,NM_138283,NM_080830	chr20,chr20,chr20	-,+,-	CST11,CSTL1,CST11	-2935,-16146,-2935
chr2:54079694-54081085	chr2	+	54079781	54081061	True	NM_001164165,NM_006794,NM_015701,NR_037453	chr2,chr2,chr2,chr2	-,-,+,-	GPR75-ASB3,GPR75,ERLEC1,MIR3682	6159,6159,-65771,-3439
chr17:26682824-26684049	chr17	+	26682859	26684016	True	NM_001080837,NM_015584,NM_152464	chr17,chr17,chr17	-,-,+	SEBOX,POLDIP2,TMEM199	8299,637,670
chrY:27597951-27598411	chrY	+	27598056	27598390	True	NR_002179,NR_002195,NR_001555	chrY,chrY,chrY	-,+,+	TTTY17C,GOLGA2P3Y,GOLGA2P2Y	-267136,3067,3067
chrY:27597951-27598411	chrY	-	26364045	26364379	False	NR_002195,NR_001526,NR_001555	chrY,chrY,chrY	-,+,-	GOLGA2P3Y,TTTY17A,GOLGA2P2Y	-3067,267099,-3067
chr1:214161739-214162270	chr1	+	214161793	214162191	True	NR_037850,NM_002763	chr1,chr1	-,+	LOC100505832,PROX1	-22185,16
chr4:25530197-25530994	chr4	+	25530579	25530943	True	NM_015187,NM_001177998	chr4,chr4	-,+	SEL1L3,SLC34A2	333717,126491
chr19:14378945-14379183	chr19	+	14379115	14379195	True	NM_014921,NM_001025160	chr19,chr19	-,+	LPHN1,CD97	-62118,113017
chr20:43804664-43805016	chr20	+	43804688	43805006	True	NM_080869,NM_002638	chr20,chr20	-,+	WFDC12,PI3	-51582,-1199
chr7:37780135-37780453	chr7	+	37780142	37780494	True	NM_003014,NM_181791	chr7,chr7	-,+	SFRP4,GPR141	176081,-197
chr6:135844684-135845150	chr6	+	135844709	135845006	True	NM_001134832,NR_026805	chr6,chr6	-,+	AHI1,NCRNA00271	-25806,-25828
chr2:241809749-241810134	chr2	+	241809780	241810116	True	NM_024861,NM_000030	chr2,chr2	-,+	C2orf54,AGXT	21386,-1669
chr6:74406008-74406246	chr6	+	74406161	74406245	True	NM_001159587,NM_012434,NM_133493,NM_001159588	chr6,chr6,chr6,chr6	+,-,+,+	CD109,SLC17A5,CD109,CD109	-704,-42424,-698,-704
chr11:67479583-67480475	chr11	+	67479614	67479916	True	NM_007103,NM_001031615	chr11,chr11	+,-	NDUFV1,ALDH3B2	-105342,-30929
chr11:67479583-67480475	chr11	+	67759716	67759766	False	NM_030930,NM_001161473	chr11,chr11	-,+	UNC93B1,ALDH3B1	11877,16281
chr1:38101809-38102676	chr1	+	38101884	38102432	True	NM_001038633,NM_018101	chr1,chr1	-,+	RSPO1,CDCA8	-1393,55726
chr11:19735699-19735909	chr11	+	19735710	19735930	True	NM_182964,NR_015384,NM_145117	chr11,chr11,chr11	+,-,+	NAV2,LOC100126784,NAV2	-880,266,-880
chr1:12835069-12835620	chr1	+	12835130	12835667	True	NM_001146344,NM_001080830	chr1,chr1	-,+	PRAMEF11,PRAMEF12	55648,-197
chr11:8176622-8177045	chr11	+	8176786	8176852	True	NM_177972,NM_001135109	chr11,chr11	+,-	TUB,RIC3	-73933,13794
chr1:158319187-158321016	chr1	+	158319406	158320593	True	NM_001764,NM_001185108,NM_001185107,NM_001185113,NM_001185112,NM_001185115,NM_001185110,NM_001185114,NM_001042583,NM_001042584,NM_001042585,NM_001042586,NM_001042587,NM_030893	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,+,+,+,+,+,+,+,+,+,+,+	CD1B,CD1E,CD1E,CD1E,CD1E,CD1E,CD1E,CD1E,CD1E,CD1E,CD1E,CD1E,CD1E,CD1E	-18085,2892,2892,2892,2892,2892,2892,2892,2892,2892,2892,2892,2892,2892
chr3:51708393-51708751	chr3	+	51708521	51708793	True	NM_015926,NM_001129884,NR_024012,NM_001143833	chr3,chr3,chr3,chr3	+,+,+,-	TEX264,TEX264,TEX264,IQCF6	-3350,-3350,-3350,104460
chr11:82799725-82800563	chr11	+	82799958	82800400	True	NM_015885,NM_014488	chr11,chr11	+,-	PCF11,RAB30	67736,-17074
chr14:89054898-89056193	chr14	+	89054927	89056169	True	NM_207662,NM_007039	chr14,chr14	+,-	ZC3H14,PTPN21	4560,-33804
chr21:15357661-15358343	chr21	+	15357676	15358356	True	NR_027270,NM_144770	chr21,chr21	-,+	C21orf81,RBM11	-4911,230109
chr21:15357661-15358343	chr21	-	15430766	15430816	False	NR_027270,NM_144770	chr21,chr21	-,+	C21orf81,RBM11	-78001,157649
chr5:31531017-31531502	chr5	+	31531081	31531532	True	NM_018356,NM_013235,NM_001100412	chr5,chr5,chr5	+,-,-	C5orf22,DROSHA,DROSHA	840,801,801
chr5:143539565-143540999	chr5	+	143539566	143540829	True	NM_020768,NM_030799,NM_001024947	chr5,chr5,chr5	+,-,-	KCTD16,YIPF5,YIPF5	9607,9507,9507
chr19:238327-240030	chr19	+	238416	238814	True	NM_001005240,NR_028324	chr19,chr19	+,-	OR4F17,FLJ45445	-127788,-36207
chr16:57392616-57393703	chr16	+	57392625	57393019	True	NM_015993,NM_002990	chr16,chr16	-,+	PLLP,CCL22	-74041,19
chr5:80693676-80694423	chr5	+	80693684	80693948	True	NM_032280,NM_130767	chr5,chr5	+,-	ZCCHC9,ACOT12	-96333,-3696
chr2:113343626-113345325	chr2	+	113343629	113345374	True	NM_032309,NR_033871	chr2,chr2	+,-	CHCHD5,FLJ42351	-1644,56434
chr4:5890537-5891167	chr4	+	5890597	5890999	True	NM_001313,NM_153717,NM_001014809	chr4,chr4,chr4	-,+,-	CRMP1,EVC,CRMP1	-282,-177724,3836
chr1:26799143-26799616	chr1	+	26799180	26799482	True	NM_005517,NM_173574	chr1,chr1	+,-	HMGN2,ZNF683	-329,-99914
chr11:61736817-61738232	chr11	+	61737073	61738107	True	NM_004183,NM_002032	chr11,chr11	+,-	BEST1,FTH1	-19777,-1941
chr7:91510062-91510312	chr7	+	91510300	91510360	True	NM_006980,NM_005751	chr7,chr7	-,+	MTERF,AKAP9	-284,59828
chr1:36851572-36851925	chr1	+	36851637	36851973	True	NM_024676,NM_032017	chr1,chr1	+,-	SH3D21,STK40	-78980,-152
chr14:73361129-73361926	chr14	+	73361147	73361844	True	NM_012074,NM_001163508	chr14,chr14	-,+	DPF3,DCAF4	-338,31195
chr7:100064800-100065214	chr7	+	100065151	100065225	True	NM_001004323,NM_173564	chr7,chr7	-,+	C7orf61,C7orf51	-3257,16324
chr10:97407661-97409202	chr10	+	97407671	97408874	True	NM_001098175,NM_001017423,NM_002860	chr10,chr10,chr10	+,-,-	ENTPD1,ALDH18A1,ALDH18A1	62661,7752,7752
chr17:76976089-76976723	chr17	+	76976191	76976709	True	NM_005567,NM_030968	chr17,chr17	-,+	LGALS3BP,C1QTNF1	-130,43541
chr4:117518170-117519302	chr4	+	117518446	117519261	True	NM_152402,NR_031737	chr4,chr4	-,+	TRAM1L1,MIR1973	487525,-297616
chr8:36641136-36641769	chr8	+	36641168	36641689	True	NM_001031836,NR_003671	chr8,chr8	+,-	KCNU1,LOC728024	152,963938
chr13:24475335-24476154	chr13	+	24475477	24476167	True	NM_001135816,NM_001007537	chr13,chr13	+,-	PCOTH,C1QTNF9B	-11936,-4352
chrX:24713888-24714548	chrX	+	24713963	24714571	True	NM_016937,NM_001163264	chrX,chrX	+,-	POLA1,PCYT1B	-1951,-22984
chr1:51844563-51844882	chr1	+	51844615	51844786	True	NM_014372,NM_001144832	chr1,chr1	+,-	RNF11,TTC39A	-142726,-33830
chr15:31127621-31129034	chr15	+	31127916	31128735	True	NM_017762,NM_001146095	chr15,chr15	-,+	MTMR10,FAN1	155123,67319
chr15:31127621-31129034	chr15	-	28387761	28387812	False	NM_000275,NR_033351	chr15,chr15	-,+	OCA2,GOLGA8F	-43303,235971
chr11:64980578-64981295	chr11	+	64980788	64981260	True	NM_172230,NM_001004326,NR_033396	chr11,chr11,chr11	-,+,+	SYVN1,SLC22A20,SLC22A20	-78785,50,50
chr1:40033851-40034873	chr1	+	40034068	40034890	True	NR_003929,NM_181809,NM_003819,NR_002983,NM_001135653,NM_001135654	chr1,chr1,chr1,chr1,chr1,chr1	-,+,-,-,-,-	PPIEL,BMP8A,PABPC4,SNORA55,PABPC4,PABPC4	-8698,-76801,7681,-886,7681,7681
chr22:35882091-35883250	chr22	+	35882191	35883054	True	NM_005368,NM_014310	chr22,chr22	-,+	MB,RASD2	130380,54297
chr20:20349059-20349283	chr20	+	20349208	20349292	True	NM_002196,NM_016652	chr20,chr20	+,-	INSM1,CRNKL1	-494,-312518
chr15:78444995-78446080	chr15	+	78445071	78445919	True	NM_006383,NM_005530	chr15,chr15	-,+	CIB2,IDH3A	-21193,-3417
chr1:175890304-175891187	chr1	+	175890532	175891226	True	NM_021936,NR_002998	chr1,chr1	+,-	PAPPA2,SCARNA3	541080,46500
chr17:74869004-74870519	chr17	+	74869339	74870401	True	NM_144677,NM_198955,NM_001199172,NR_036608	chr17,chr17,chr17,chr17	+,+,+,-	MGAT5B,MGAT5B,MGAT5B,SRSF2	-4592,-661,-4592,-135846
chr3:10289878-10290095	chr3	+	10289884	10290060	True	NM_001134941,NM_014760	chr3,chr3	-,+	GHRL,TATDN2	42409,116
chr17:73128121-73128322	chr17	+	73128130	73128196	True	NM_014595,NM_024585	chr17,chr17	-,+	NT5C,ARMC7	-253,-22099
chr6:41513164-41513393	chr6	+	41513190	41513434	True	NM_001012426,NM_001012427,NM_007162,NM_138457	chr6,chr6,chr6,chr6	+,+,-,+	FOXP4,FOXP4,TFEB,FOXP4	729,729,189414,729
chr1:93938291-93938914	chr1	+	93938422	93938886	True	NR_034089,NM_017737	chr1,chr1	-,+	LOC100131564,FNBP1L	-127054,-24800
chr3:194387708-194387938	chr3	+	194387730	194387803	True	NM_018385,NM_153690	chr3,chr3	-,+	LSG1,FAM43A	5462,18818
chr3:71838601-71839430	chr3	+	71838834	71839212	True	NM_018971,NM_001126128,NM_021935	chr3,chr3,chr3	+,-,-	GPR27,PROK2,PROK2	-35684,-4477,-4477
chr2:105853246-105853621	chr2	+	105853292	105853564	True	NM_001142621,NM_007227	chr2,chr2	-,+	TGFBRAP1,GPR45	92634,4635
chr1:51811164-51812153	chr1	+	51811698	51812156	True	NM_014372,NM_001144832	chr1,chr1	+,-	RNF11,TTC39A	-109811,-913
chr3:135086216-135087282	chr3	+	135086227	135087226	True	NM_178554,NM_004441	chr3,chr3	-,+	KY,EPHB1	-716363,-572195
chr2:85554180-85554469	chr2	+	85554184	85554500	True	NM_001135021,NM_006464	chr2,chr2	+,-	ELMOD3,TGOLN2	27342,924
chr16:71730498-71731841	chr16	+	71730656	71731668	True	NR_033337,NM_001017967	chr16,chr16	-,+	SNORA70D,MARVELD3	986,-70651
chr19:637867-638809	chr19	+	637907	638829	True	NM_005035,NM_020637	chr19,chr19	-,+	POLRMT,FGF22	-4339,1096
chr8:57228204-57228720	chr8	+	57228208	57228752	True	NM_138969,NM_024300	chr8,chr8	-,+	SDR16C5,CHCHD7	4539,-103945
chr6:152494750-152495341	chr6	+	152494781	152495333	True	NM_000125,NM_133650	chr6,chr6	+,-	ESR1,SYNE1	-366018,5326
chr12:5279566-5280550	chr12	+	5279742	5280476	True	NM_006422,NM_002234	chr12,chr12	-,+	AKAP3,KCNA5	-525399,-126708
chr22:24577750-24578278	chr22	+	24577966	24578312	True	NM_001099781,NM_019601	chr22,chr22	-,+	GGT5,SUSD2	62848,-573
chr1:167877532-167879162	chr1	+	167877682	167879082	True	NM_018417,NM_001017977,NM_001167749	chr1,chr1,chr1	-,+,-	ADCY10,DCAF6,ADCY10	4421,26714,4421
chr1:178508591-178508825	chr1	+	178508607	178508703	True	NR_033186,NM_004673	chr1,chr1	+,-	C1orf220,ANGPTL1	3227,331562
chr3:121935525-121936043	chr3	+	121935590	121935874	True	NM_001017928,NM_001178065	chr3,chr3	-,+	CCDC58,CASR	166250,-32470
chr2:48839696-48841512	chr2	+	48839785	48840975	True	NM_001193487,NM_000233,NM_006872	chr2,chr2,chr2	+,-,+	GTF2A1L,LHCGR,GTF2A1L	3961,141966,3961
chrX:15684442-15685214	chrX	+	15684685	15685089	True	NM_020665,NR_026551	chrX,chrX	-,+	TMEM27,CA5BP1	-1531,7949
chrX:2608637-2609002	chrY	+	2558723	2559045	False	NM_003140,NM_002414,NM_001122898	chrY,chrY,chrY	-,+,+	SRY,CD99,CD99	96797,182,182
chrX:2608637-2609002	chrX	+	2608723	2609045	True	NR_037842,NM_002414,NM_001122898	chrX,chrX,chrX	-,+,+	NCRNA00102,CD99,CD99	-75335,182,182
chr1:36565042-36565745	chr1	+	36565048	36565720	True	NM_005202,NM_017825	chr1,chr1	-,+	COL8A2,ADPRHL2	180,-10646
chr17:37842802-37843693	chr17	+	37843143	37843735	True	NM_001005862,NM_033419	chr17,chr17	+,-	ERBB2,PGAP3	657,625
chr22:50711020-50711257	chr22	+	50711063	50711133	True	NM_002751,NM_014678	chr22,chr22	-,+	MAPK11,PPP6R2	-2284,70626
chr14:75746887-75747336	chr14	+	75746978	75747330	True	NM_006827,NM_005252	chr14,chr14	-,+	TMED10,FOS	-103629,-1548
chr1:165729960-165731040	chr1	+	165730162	165730494	True	NM_019026,NR_036683	chr1,chr1	-,+	TMCO1,LOC440700	7697,-62233
chr6:74164764-74165324	chr6	+	74164765	74164854	True	NM_001123226,NM_012123,NM_133645,NM_138441	chr6,chr6,chr6,chr6	+,+,+,-	MTO1,MTO1,MTO1,MB21D1	6599,6599,6599,-2722
chr2:74739330-74739661	chr2	+	74739336	74739484	True	NM_016170,NM_001009812,NM_032673,NR_024606	chr2,chr2,chr2,chr2	+,-,-,+	TLX2,LBX2,PCGF1,LOC151534	2111,-8893,-4515,-9643
chr9:125714937-125715771	chr9	+	125715016	125715640	True	NM_012197,NM_020924	chr9,chr9	+,-	RABGAP1,ZBTB26	-11780,-21237
chr9:5341406-5342031	chr9	+	5341544	5342060	True	NM_014143,NM_006911	chr9,chr9	+,-	CD274,RLN1	108442,-1671
chr9:5341406-5342031	chr9	+	5306474	5306535	False	NM_005059,NM_134441,NM_002195	chr9,chr9,chr9	-,-,+	RLN2,RLN2,INSL4	-1894,-1894,-75117
chr6:139350956-139352246	chr6	+	139351127	139352205	True	NM_031922,NM_021243	chr6,chr6	-,+	REPS1,C6orf115	-41729,-1359
chr6:165510057-165511633	chr6	+	165510066	165511356	True	NM_144980,NR_027284	chr6,chr6	-,+	C6orf118,LOC441177	211805,889682
chr10:30999749-31000453	chr10	+	30999777	31000435	True	NM_183058,NM_005204	chr10,chr10	-,+	LYZL2,MAP3K8	-81130,-276964
chr5:72790414-72791694	chr5	+	72790503	72791526	True	NM_004472,NM_001037637,NM_001207	chr5,chr5,chr5	-,+,+	FOXD1,BTF3,BTF3	-46151,2723,2723
chr2:240984791-240985074	chr2	+	240984805	240985052	True	NR_037808,NM_173351,NM_001080835	chr2,chr2,chr2	+,-,-	LOC150935,OR6B3,PRR21	-300302,488,-2406
chr2:240984791-240985074	chr2	+	240969314	240969409	False	NM_001005853,NR_037808,NM_004544	chr2,chr2,chr2	-,+,-	OR6B2,LOC150935,NDUFA10	488,-284811,-4495
chr20:6024410-6024807	chr20	+	6024596	6024787	True	NM_001127458,NM_152611	chr20,chr20	+,-	CRLS1,LRRN4	-36749,9958
chr19:10829445-10831397	chr19	+	10829781	10830872	True	NR_030368,NM_001005360,NM_001005362,NM_004945,NM_001005361,NR_024333,NM_001190716	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,-,+	MIR638,DNM2,DNM2,DNM2,DNM2,LOC147727,DNM2	-752,-1103,-1103,-1103,-1103,-65233,-1103
chr8:8012162-8013008	chr8	+	8012408	8012972	True	NR_031689,NR_024362	chr8,chr8	-,+	MIR548I3,FLJ10661	-65797,73119
chr8:8012162-8013008	chr8	-	12367711	12368274	False	NR_026789,NM_001137610	chr8,chr8	+,-	FAM66A,FAM86B2	-148234,-73859
chr16:85041575-85043405	chr16	+	85041818	85043136	True	NM_017740,NM_001145548,NM_014732	chr16,chr16,chr16	-,-,+	ZDHHC7,ZDHHC7,KIAA0513	2055,2055,18273
chr16:30456413-30456738	chr16	+	30456433	30456551	True	NM_001114380,NM_012248	chr16,chr16	+,-	ITGAL,SEPHS2	27431,723
chr12:48723106-48723330	chr12	+	48723156	48723360	True	NM_001172681,NM_181788	chr12,chr12	-,+	ZNF641,H1FNT	21364,-444
chr16:50583462-50583738	chr16	+	50583540	50583660	True	NM_001144972,NM_033119	chr16,chr16	-,+	SNX20,NKD1	131654,-1350
chr12:16069475-16070620	chr12	+	16069661	16070575	True	NM_004447,NM_015954	chr12,chr12	-,+	EPS8,DERA	-127151,-5526
chr14:32419645-32420683	chr14	+	32419686	32420635	True	NR_027263,NM_001030055	chr14,chr14	-,+	C14orf128,ARHGAP5	125321,125859
chr1:28654779-28655077	chr1	+	28654822	28654928	True	NM_014280,NM_017638,NM_001127350	chr1,chr1,chr1	-,+,+	DNAJC8,MED18,MED18	-95280,584,584
chr5:148742183-148742596	chr5	+	148742250	148742622	True	NM_024028,NM_014443	chr5,chr5	+,-	PCYOX1L,IL17B	-4731,16266
chr17:61951040-61951752	chr17	+	61951044	61951744	True	NM_020991,NM_022645,NM_022644,NM_022557,NM_022556,NR_002947,NM_002059,NM_022558	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,+,-,-	CSH2,CSH2,CSH2,GH2,GH2,TCAM1P,GH2,GH2	45,45,45,7529,7529,-16719,7529,7529
chr17:61951040-61951752	chr17	+	61973941	61974447	False	NM_022641,NM_022640,NR_002947,NM_001317	chr17,chr17,chr17,chr17	-,-,+,-	CSH1,CSH1,TCAM1P,CSH1	80,80,-39616,80
chr1:152480430-152480958	chr1	+	152480433	152481008	True	NM_178438,NM_019060,NM_178435	chr1,chr1,chr1	+,+,-	LCE5A,CRCT1,LCE3E	2311,5969,58293
chr6:37322106-37322330	chr6	+	37322123	37322269	True	NM_183078,NM_001162900,NM_003958	chr6,chr6,chr6	+,-,+	RNF8,TMEM217,RNF8	-426,-96192,-426
chr19:9436322-9436944	chr19	+	9436581	9436756	True	NM_001172650,NM_001202425,NM_032497,NM_198535,NM_001202409,NM_001202408,NM_001202407,NM_001202406,NM_001202410,NM_001202411,NM_001202412	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,-,+,+,+,+,+,+,+	ZNF559-ZNF177,ZNF559-ZNF177,ZNF559,ZNF699,ZNF559,ZNF559,ZNF559,ZNF559,ZNF559,ZNF559,ZNF559	-1735,-1266,-2189,-20786,-2189,-2189,-2189,-2189,-2189,-2189,-1735
chr4:142055710-142056001	chr4	+	142055729	142055931	True	NM_020724,NM_014487	chr4,chr4	-,+	RNF150,ZNF330	-1113,86117
chr9:34397034-34397495	chr9	+	34397060	34397532	True	NM_012144,NM_032596	chr9,chr9	+,-	DNAI1,C9orf24	61278,367
chr17:19770120-19770403	chr17	+	19770204	19770380	True	NM_000382,NM_014683,NM_001142610	chr17,chr17,chr17	+,-,-	ALDH3A2,ULK2,ULK2	-218191,909,909
chr12:31481669-31482339	chr12	+	31481944	31482214	True	NM_021238,NR_026806,NM_001135812,NM_001135811	chr12,chr12,chr12,chr12	-,+,-,-	FAM60A,FLJ13224,FAM60A,FAM60A	-2823,-4755,-2785,-2823
chr1:2006900-2007102	chr1	+	2006916	2007150	True	NM_001080484,NM_001033581	chr1,chr1	-,+	KIAA1751,PRKCZ	-71640,-1881
chr22:42526232-42526668	chr22	+	42526248	42526654	True	NM_001025161,NM_000106,NR_034118	chr22,chr22,chr22	-,-,+	CYP2D6,CYP2D6,LOC100132273	279,279,-39363
chr22:42526232-42526668	chr22	+	42539919	42540325	False	NR_002570,NR_034118	chr22,chr22	-,+	CYP2D7P1,LOC100132273	300,-53034
chrX:49456459-49458455	chrX	+	49456922	49458329	True	NM_003785,NM_001468	chrX,chrX	-,+	PAGE1,GAGE1	2323,-93366
chr1:150240629-150241080	chr1	+	150240646	150240950	True	NM_024579,NM_016022,NM_001077628	chr1,chr1,chr1	+,-,-	C1orf54,APH1A,APH1A	4232,632,632
chr10:135120425-135122052	chr10	+	135120566	135121967	True	NM_145806,NM_006659	chr10,chr10	+,-	ZNF511,TUBGCP2	455,727
chr22:24953712-24954794	chr22	+	24953736	24954766	True	NM_004175,NM_031444	chr22,chr22	+,-	SNRPD3,C22orf13	-2169,-2461
chr16:68036832-68038006	chr16	+	68036879	68037721	True	NM_017803,NM_022355	chr16,chr16	+,-	DUS2L,DPEP2	19482,-3515
chrX:153997592-153998507	chrX	+	153997592	153998330	True	NR_002984,NM_080612,NM_001363,NR_002969,NM_001142463	chrX,chrX,chrX,chrX,chrX	+,-,+,+,+	SNORA56,GAB3,DKC1,SNORA36A,DKC1	4942,-18244,-6613,-841,-6613
chr4:109518492-109520064	chr4	+	109519513	109520027	True	NR_026968,NM_000995	chr4,chr4	-,+	LOC285456,RPL34	21646,21694
chr19:11483796-11484867	chr19	+	11483956	11484607	True	NM_000121,NM_175871	chr19,chr19	-,+	EPOR,C19orf39	10464,775
chr13:111358032-111358261	chr13	+	111358035	111358305	True	NM_198218,NM_198219,NM_005537,NM_024537,NM_198217	chr13,chr13,chr13,chr13,chr13	+,+,+,-,+	ING1,ING1,ING1,CARS2,ING1	7304,7319,9053,225,6777
chr2:45238305-45239656	chr2	+	45238321	45239575	True	NM_005413,NM_016932	chr2,chr2	+,-	SIX3,SIX2	-69335,-1779
chr2:176972131-176972360	chr2	+	176972155	176972281	True	NM_002148,NM_001080458,NM_021192,NM_021193	chr2,chr2,chr2,chr2	+,-,+,+	HOXD10,EVX2,HOXD11,HOXD12	9210,-23465,-122,-7676
chr19:1525180-1525391	chr19	+	1525228	1525372	True	NR_026557,NM_213604	chr19,chr19	+,-	PLK5P,ADAMTSL5	-1201,-12040
chr11:35417044-35418793	chr11	+	35417107	35417195	True	NM_014344,NM_004171	chr11,chr11	+,-	FJX1,SLC1A2	222539,23960
chr17:74732953-74733258	chr17	+	74733017	74733181	True	NR_036608,NM_003016,NM_024311,NR_030366,NM_001195427	chr17,chr17,chr17,chr17,chr17	-,-,+,-,-	SRSF2,SRSF2,MFSD11,MIR636,SRSF2	362,362,601,-387,362
chr15:22955818-22956294	chr15	+	22956020	22956256	True	NM_001033028,NM_001008860	chr15,chr15	+,-	CYFIP1,NIPA2	-316,78221
chrX:53311300-53311853	chrX	+	53311311	53311901	True	NR_024449,NM_015075,NM_144968	chrX,chrX,chrX	-,-,+	IQSEC2,IQSEC2,RIBC1	-515,-515,137937
chr4:16085884-16086290	chr4	+	16085971	16086247	True	NM_001145849,NM_001145848,NM_001145847,NM_001145850,NM_001145851,NM_001145852,NM_006017,NR_027696	chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4	-,-,-,-,-,-,-,+	PROM1,PROM1,PROM1,PROM1,PROM1,PROM1,PROM1,FLJ39653	-8230,-348,-377,-8230,-8230,-8230,-8230,142038
chr5:76383272-76383913	chr5	+	76383300	76383816	True	NR_003014,NR_024398,NM_032367	chr5,chr5,chr5	-,+,-	SNORA47,LOC728723,ZBED3	-6904,-728,-270
chr7:30726892-30728074	chr7	+	30726925	30728089	True	NM_001202483,NM_001202482,NM_001199219,NM_001883	chr7,chr7,chr7,chr7	-,-,+,-	CRHR2,CRHR2,INMT,CRHR2	-4784,-4784,63661,-4784
chr10:112626904-112627235	chr10	+	112626904	112627284	True	NM_014456,NR_026932,NM_145341,NM_001199492	chr10,chr10,chr10,chr10	+,-,+,+	PDCD4,LOC282997,PDCD4,PDCD4	4268,3428,4268,4268
chr10:103982810-103984578	chr10	+	103983106	103984407	True	NM_005029,NM_152310	chr10,chr10	-,+	PITX3,ELOVL3	16875,1735
chr3:135969514-135970935	chr3	+	135969531	135970643	True	NM_001178014,NM_000532,NM_018133	chr3,chr3,chr3	+,+,-	PCCB,PCCB,MSL2	-415,-415,-54843
chr16:57407772-57409370	chr16	+	57407962	57409339	True	NM_020313,NM_002996	chr16,chr16	-,+	CIAPIN1,CX3CL1	72081,-1600
chr2:171569105-171569568	chr2	+	171569121	171569566	True	NM_001003845,NR_027433	chr2,chr2	+,-	SP5,LOC440925	2290,1562
chr12:5541333-5541650	chr12	+	5541416	5541514	True	NM_020373,NM_001102654	chr12,chr12	-,+	ANO2,NTF3	513934,-187
chr2:17694069-17694338	chr2	+	17694072	17694379	True	NM_003385,NM_001099218	chr2,chr2	+,-	VSNL1,RAD51AP2	27427,5382
chr12:109835341-109835559	chr12	+	109835343	109835589	True	NM_001101421,NM_031954	chr12,chr12	+,-	MYO1H,KCTD10	-8878,79616
chr16:3162805-3163119	chr16	+	3162920	3163160	True	NM_001042428,NR_024167,NR_024166,NM_003456	chr16,chr16,chr16,chr16	+,-,-,+	ZNF205,MGC3771,MGC3771,ZNF205	-408,2489,2489,-408
chr21:27544276-27544693	chr21	+	27544360	27544716	True	NM_201413,NM_000484,NM_001204302,NM_201414,NM_001204301,NM_001136129,NM_002040,NM_001136131,NM_001136130,NM_001204303	chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21	-,-,-,-,-,-,+,-,-,-	APP,APP,APP,APP,APP,APP,GABPA,APP,APP,APP	-1222,-1222,-1222,-1222,-1222,-1222,-437083,-914,-1222,-1222
chr19:48869569-48870612	chr19	+	48870007	48870094	True	NM_018273,NM_012451	chr19,chr19	-,+	TMEM143,SYNGR4	-2821,-2416
chr1:156083017-156084485	chr1	+	156083430	156084534	True	NM_001093725,NM_005572,NM_170707,NM_170708	chr1,chr1,chr1,chr1	-,+,+,+	MEX3A,LMNA,LMNA,LMNA	-31641,-74,-74,-74
chr15:35838613-35839096	chr15	+	35838681	35839053	True	NM_080650,NM_001141972,NR_003144	chr15,chr15,chr15	-,-,+	ATPBD4,ATPBD4,LOC723972	-277,-277,-309205
chr1:156562213-156562759	chr1	+	156562324	156562748	True	NM_144772,NM_182679,NM_015590	chr1,chr1,chr1	+,-,-	APOA1BP,GPATCH4,GPATCH4	-817,8581,8581
chr6:39080834-39082142	chr6	+	39080924	39082175	True	NM_018322,NM_002062	chr6,chr6	-,+	C6orf64,GLP1R	740,-64418
chr1:110254484-110254724	chr1	+	110254501	110254649	True	NM_000851,NM_000849	chr1,chr1	+,-	GSTM5,GSTM3	214,29061
chr1:110254484-110254724	chr1	+	110230123	110230201	False	NM_000561,NM_000849,NM_146421	chr1,chr1,chr1	+,-,+	GSTM1,GSTM3,GSTM1	216,53509,216
chr1:115302228-115303726	chr1	+	115302590	115303633	True	NM_007158,NM_001007553,NM_001130523,NM_003176	chr1,chr1,chr1,chr1	-,-,-,+	CSDE1,CSDE1,CSDE1,SYCP1	-1966,-1966,-1919,93821
chr14:71107311-71107542	chr14	+	71107367	71107557	True	NM_015351,NM_005466	chr14,chr14	+,-	TTC9,MED6	946,-39983
chr1:222914334-222914559	chr1	+	222914333	222914399	True	NM_207468,NM_022831	chr1,chr1	+,-	FAM177B,AIDA	-3828,-28469
chr10:50732817-50734750	chr10	+	50732829	50734704	True	NM_020984,NM_170753	chr10,chr10	+,-	CHAT,PGBD3	82436,-470
chr18:74531596-74532173	chr18	+	74531920	74532120	True	NM_007345,NM_001025081	chr18,chr18	+,-	ZNF236,MBP	3995,196985
chr17:39115048-39116585	chr17	+	39115072	39116626	True	NM_033061,NM_213656	chr17,chr17	+,-	KRTAP4-7,KRT39	123832,6568
chr17:41129475-41129815	chr17	+	41129747	41129819	True	NM_001142653,NM_001136042,NM_025267,NM_173079,NM_001142654	chr17,chr17,chr17,chr17,chr17	-,-,-,+,-	AARSD1,AARSD1,AARSD1,RUNDC1,AARSD1	2776,2776,2251,2762,2776
chr10:89578163-89578730	chr10	+	89578169	89578767	True	NM_032810,NR_028492	chr10,chr10	-,+	ATAD1,CFLP1	-252,-150
chr5:140209083-140209362	chr5	+	140209168	140209410	True	NM_031849,NM_002109,NM_018908,NM_018909,NM_031848,NM_031501,NM_018910,NM_031852	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,-,+,+,+,+,+,+	PCDHA6,HARS,PCDHA5,PCDHA6,PCDHA6,PCDHA5,PCDHA7,PCDHA7	-1569,-138197,-7858,-1569,-1569,-7858,4558,4558
chr5:10352298-10353347	chr5	+	10352309	10353345	True	NM_005885,NM_138809	chr5,chr5	+,-	MARCH6,CMBL	482,-44141
chr2:135206369-135207410	chr2	+	135206516	135207405	True	NM_030923,NR_024275	chr2,chr2	-,+	TMEM163,LOC151162	269216,33
chr7:141437739-141438085	chr7	+	141437961	141438127	True	NM_003143,NR_015392	chr7,chr7	+,-	SSBP1,FLJ40852	48,21
chr12:56137274-56137635	chr12	+	56137308	56137538	True	NM_001780,NM_005811	chr12,chr12	-,+	CD63,GDF11	-14398,-295
chr5:150632323-150632604	chr5	+	150632538	150632652	True	NM_000405,NM_015621,NM_001167607	chr5,chr5,chr5	+,-,+	GM2A,CCDC69,GM2A	16,-28884,16
chr11:99036987-99038832	chr11	+	99037195	99038393	True	NM_175566,NM_001202474	chr11,chr11	+,-	CNTN5,PGR	-145377,1961461
chr10:43961440-43962616	chr10	+	43962137	43962308	True	NR_026693,NM_001098204	chr10,chr10	+,-	ZNF487P,HNRNPF	-29622,-57441
chr15:25419652-25420953	chr15	+	25420001	25420869	True	NR_003304,NM_130838,NR_003298,NR_003299,NR_001291,NR_003300,NR_003301,NR_003302,NR_003296,NR_003297,NR_003294,NR_003295	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,-,+,+,+,+,+,+,+,+,+,+	SNORD115-12,UBE3A,SNORD115-6,SNORD115-7,SNORD115-1,SNORD115-8,SNORD115-9,SNORD115-10,SNORD115-4,SNORD115-5,SNORD115-2,SNORD115-3	3018,229834,4774,6662,-4182,8583,3018,3018,1109,3015,-2270,22
chr3:39423192-39423625	chr3	+	39423232	39423468	True	NM_001171174,NM_017875	chr3,chr3	-,+	CX3CR1,SLC25A38	-100006,1346
chr3:127543897-127545282	chr3	+	127543997	127544855	True	NM_207335,NM_001003794,NM_007283	chr3,chr3,chr3	+,-,-	KBTBD12,MGLL,MGLL	97046,-1946,-2296
chr9:86570036-86570425	chr9	+	86570323	86570466	True	NM_024945,NM_032307	chr9,chr9	+,-	RMI1,C9orf64	25170,1248
chr14:102412576-102413411	chr14	+	102412595	102413277	True	NM_001376,NM_005348	chr14,chr14	+,-	DYNC1H1,HSP90AA1	17587,140285
chr3:51739739-51741019	chr3	+	51739834	51740574	True	NM_001143833,NM_001130063,NM_000839	chr3,chr3,chr3	-,+,+	IQCF6,GRM2,GRM2	72679,506,506
chr9:80913067-80914519	chr9	+	80913187	80914414	True	NM_002072,NM_021154,NM_058179	chr9,chr9,chr9	-,+,+	GNAQ,PSAT1,PSAT1	-266968,-1192,-1192
chr16:66584946-66585381	chr16	+	66585188	66585400	True	NM_001204099,NM_001204098,NM_016951,NM_001172645,NM_001172644,NM_001172643,NM_001202509,NM_001040138,NM_004614,NM_181641,NM_181640,NM_016326	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,-,-,-,+,+,-,+,+,+	CKLF-CMTM1,CKLF-CMTM1,CKLF,TK2,TK2,TK2,CKLF-CMTM1,CKLF,TK2,CKLF,CKLF,CKLF	1065,1065,1065,-873,-873,-994,1065,1065,-873,1065,1065,1065
chr16:20421625-20423387	chr16	+	20421651	20422998	True	NM_174924,NM_017888	chr16,chr16	-,+	PDILT,ACSM5	-5618,-859
chr17:13507385-13508789	chr17	+	13507688	13508744	True	NR_003261,NM_006042	chr17,chr17	+,-	CDRT15P,HS3ST3A1	419070,-2444
chr11:69519601-69519926	chr11	+	69519639	69519699	True	NM_005117,NM_053056	chr11,chr11	-,+	FGF19,CCND1	-533,-63817
chr1:41848518-41848934	chr1	+	41848663	41848863	True	NM_001956,NR_037868	chr1,chr1	-,+	EDN2,LOC100507178	101531,-368452
chr4:185939694-185940499	chr4	+	185939701	185940526	True	NM_001029887,NR_037510	chr4,chr4	+,-	HELT,MIR3945	-48,-167437
chr6:168197623-168198220	chr6	+	168197690	168198190	True	NR_026773,NM_001040000	chr6,chr6	-,+	C6orf123,MLLT4	-151,29480
chr14:68059661-68061586	chr14	+	68059792	68061439	True	NM_001172,NM_004569	chr14,chr14	+,-	ARG2,PIGH	25139,5628
chr4:2759353-2760013	chr4	+	2759356	2759746	True	NM_001122681,NM_001161527,NM_024309	chr4,chr4,chr4	+,-,-	SH3BP2,TNIP2,TNIP2	35003,-1604,-1253
chr10:49086658-49087159	chr10	+	49086795	49087209	True	NM_001137548,NM_002750	chr10,chr10	-,+	FAM25C,MAPK8	120670,522477
chr10:49086658-49087159	chr10	+	46897045	46897459	False	NR_027632,NM_181519	chr10,chr10	+,-	FAM35B,SYT15	181,73196
chr10:49086658-49087159	chr10	+	47379125	47379539	False	NR_024495,NR_027634	chr10,chr10	-,+	LOC642826,FAM35B2	-135631,180
chrX:32314228-32315549	chrX	+	32314531	32315272	True	NM_004011,NM_203391	chrX,chrX	-,+	DMD,GK	115156,-1643106
chr7:150017774-150019027	chr7	+	150017889	150018528	True	NM_001142928,NM_138434,NM_001164458,NM_023942	chr7,chr7,chr7,chr7	+,+,-,+	LRRC61,C7orf29,ACTR3C,LRRC61	1767,8409,2293,1767
chrX:48916553-48916858	chrX	+	48916556	48916886	True	NM_007213,NM_033626,NM_001163322,NM_001163323,NM_001163321	chrX,chrX,chrX,chrX,chrX	-,+,+,+,+	PRAF2,CCDC120,CCDC120,CCDC120,CCDC120	14826,-91,-91,-84,-84
chr1:17636540-17637042	chr1	+	17636612	17636886	True	NM_001136204,NM_012387	chr1,chr1	-,+	RCC2,PADI4	128221,-1984
chr2:41385323-41386423	chr2	+	41385504	41386262	True	NR_033996,NM_001112802	chr2,chr2	+,-	LOC388942,SLC8A1	718432,-645929
chr7:158649756-158650476	chr7	+	158649798	158650050	True	NM_020728,NM_018051	chr7,chr7	-,+	ESYT2,WDR60	-27479,-590
chr12:123214226-123214496	chr12	+	123214266	123214518	True	NM_032554,NM_003677	chr12,chr12	-,+	GPR81,DENR	661,22852
chr16:67359987-67360381	chr16	+	67360121	67360181	True	NM_018296,NM_001100915	chr16,chr16	+,-	LRRC36,KCTD19	565,530
chr12:17142032-17142637	chr12	+	17142037	17142483	True	NR_036619,NM_001001395	chr12,chr12	+,-	LOC728622,LMO3	-407,-381013
chr10:101294316-101294700	chr10	+	101294322	101294664	True	NM_031212,NM_145285	chr10,chr10	-,+	SLC25A28,NKX2-3	85607,-1683
chr6:25963507-25963964	chr6	+	25963740	25964005	True	NM_006355,NM_005835	chr6,chr6	+,-	TRIM38,SLC17A2	-720,-32794
chr17:44242757-44243732	chr17_ctg5_hap1	-	623070	623137	False	NM_001193466,NR_034172	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	KIAA1267,LOC644246	-26954,-27684
chr17:44242757-44243732	chr17_ctg5_hap1	-	1351617	1351684	False	NR_002940,NM_016632	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LRRC37A4,ARL17A	129692,162256
chr17:44242757-44243732	chr17	+	44243157	44243286	True	NM_001193466,NR_034172	chr17,chr17	-,+	KIAA1267,LOC644246	26935,27652
chr17:43127705-43128264	chr17	+	43127720	43128240	True	NM_021079,NM_001128631	chr17,chr17	+,-	NMT1,DCAKD	10439,788
chr19:52067926-52069609	chr19	+	52068315	52069612	True	NM_007147,NR_034159	chr19,chr19	+,-	ZNF175,FLJ30403	4918,28072
chr3:124604807-124605303	chr3	+	124604854	124605266	True	NM_002213,NR_033437	chr3,chr3	-,+	ITGB5,UMPS	928,-155692
chr1:226735528-226736396	chr1	+	226735648	226736222	True	NM_001618,NM_001003665	chr1,chr1	-,+	PARP1,C1orf95	-139847,278
chr15:44173582-44173825	chr15	+	44173601	44173873	True	NM_024908,NR_003571	chr15,chr15	+,-	WDR76,LOC728758	-54540,-3232
chr9:17572930-17574140	chr9	+	17573013	17574183	True	NM_003026,NM_017637	chr9,chr9	+,-	SH3GL2,BNC2	4769,-702227
chr17:42275026-42276210	chr17	+	42275050	42276106	True	NM_020218,NM_177441,NM_001098833	chr17,chr17,chr17	-,+,-	ATXN7L3,TMUB2,ATXN7L3	97,-10527,97
chr5:137600794-137600996	chr5	+	137600806	137600899	True	NM_001496,NM_001135647	chr5,chr5	-,+	GFRA3,FAM53C	9413,72324
chr17:8288048-8288946	chr17	+	8288101	8288951	True	NM_000987,NM_153007	chr17,chr17	-,+	RPL26,ODF4	-1536,-44964
chr12:53834681-53835100	chr12	+	53834819	53835119	True	NM_001193511,NM_001005354,NM_018457	chr12,chr12,chr12	-,+,+	MAP3K12,PRR13,PRR13	58375,313,313
chr17:40974143-40975364	chr17	+	40974280	40975286	True	NM_003766,NM_005789	chr17,chr17	-,+	BECN1,PSME3	1083,10136
chr2:107079853-107080522	chr2	+	107080115	107080181	True	NM_001144013,NR_003506	chr2,chr2	-,+	RGPD3,PLGLA	4670,-77398
chr2:107079853-107080522	chr2	-	108448664	108448730	False	NM_182588,NR_024439	chr2,chr2	+,-	RGPD4,LOC729121	-5327,-6081
chr19:46849926-46850281	chr19	+	46850019	46850267	True	NM_006247,NM_001204284,NM_032040	chr19,chr19,chr19	+,+,-	PPP5C,PPP5C,CCDC8	-17,-17,66702
chr1:200591264-200592020	chr1	+	200591617	200591683	True	NM_014875,NM_203459	chr1,chr1	-,+	KIF14,CAMSAP1L1	-1755,117002
chr15:43213781-43214796	chr15	+	43213790	43214740	True	NM_024956,NM_173500	chr15,chr15	+,-	TMEM62,TTBK2	210981,-783
chr10:106398990-106399823	chr10	+	106399031	106399809	True	NM_033397,NM_014978	chr10,chr10	-,+	ITPRIP,SORCS3	-305368,1049
chr1:10491833-10492435	chr1	+	10491926	10492484	True	NM_198544,NM_004401,NR_036462,NM_199294,NM_199006,NR_037187,NR_037186	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,-,+,+,+,+,+	APITD1-CORT,DFFA,APITD1,APITD1,APITD1-CORT,APITD1-CORT,APITD1-CORT	-1826,40179,-1181,-1826,-1826,-1181,-1181
chr5:176740033-176740363	chr5	+	176740098	176740268	True	NM_130781,NM_013237,NM_001142935,NM_031300,NM_001031677	chr5,chr5,chr5,chr5,chr5	-,+,-,-,-	RAB24,PRELID1,MXD3,MXD3,RAB24	-9354,-9314,-806,-806,-9354
chr8:144681299-144681533	chr8	+	144681334	144681462	True	NM_001130053,NM_032378,NM_001130055,NM_001130056,NM_001130057,NM_032862,NM_001960,NM_001195203	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,-,+,-,-	EEF1D,EEF1D,EEF1D,EEF1D,EEF1D,TIGD5,EEF1D,EEF1D	-1489,-1489,-1489,-1489,-1776,-1311,-1489,-1489
chr17:64880171-64880378	chr17	+	64880343	64880427	True	NM_014877,NM_145811	chr17,chr17	-,+	HELZ,CACNG5	360942,-7003
chr10:73531130-73532267	chr10	+	73531215	73532205	True	NM_022153,NM_001171933	chr10,chr10	-,+	C10orf54,CDH23	1182,23322
chr2:65357324-65357599	chr2	+	65357328	65357612	True	NM_004161,NM_015147,NM_015543	chr2,chr2,chr2	-,+,-	RAB1A,CEP68,RAB1A	79,-73884,79
chrX:48780988-48781254	chrX	+	48780999	48781239	True	NM_006875,NM_001167992	chrX,chrX	-,+	PIM2,PQBP1	-4586,-25275
chr3:49203797-49204001	chr3	+	49203895	49203973	True	NM_173546,NM_022903	chr3,chr3	+,-	KLHDC8B,CCDC71	5044,-110
chr13:21278922-21279758	chr13	+	21279071	21279703	True	NM_138284,NM_174928	chr13,chr13	+,-	IL17D,N6AMT2	-1640,68405
chr8:72979451-72981050	chr8	+	72979455	72980995	True	NM_007332,NR_033651	chr8,chr8	-,+	TRPA1,LOC100132891	6885,-223155
chr11:125757123-125757375	chr11	+	125757180	125757414	True	NM_001134793,NM_145014,NM_031307	chr11,chr11,chr11	+,+,-	HYLS1,HYLS1,PUS3	-276,-3722,15752
chr8:94861969-94862949	chr8	+	94861972	94862351	True	NM_203390,NM_018444	chr8,chr8	-,+	RBM12B,PDP1	-108748,66731
chr9:98147252-98147756	chr9	+	98147516	98147776	True	NM_000136,NR_029496	chr9,chr9	-,+	FANCC,MIR24-1	-67525,-299265
chr8:21790904-21791898	chr8	+	21790996	21791608	True	NM_003974,NM_015024	chr8,chr8	-,+	DOK2,XPO7	-19791,-13880
chr10:7658529-7660225	chr10	+	7658859	7659928	True	NM_002216,NM_032817	chr10,chr10	+,-	ITIH2,ITIH5	85307,1765
chr1:206326304-206327333	chr1	+	206326329	206327345	True	NM_001007544,NM_001910,NM_148964	chr1,chr1,chr1	-,+,+	C1orf186,CTSE,CTSE	-37682,-8921,-8921
chr4:147441857-147442182	chr4	+	147441857	147442213	True	NM_001029998,NM_032128,NM_004575	chr4,chr4,chr4	-,-,+	SLC10A7,SLC10A7,POU4F2	960,960,117831
chr17:72356423-72357285	chr17	+	72356524	72357262	True	NM_181790,NM_001080466	chr17,chr17	+,-	GPR142,BTBD17	6382,746
chr17:3569079-3569664	chr17	+	3569089	3569651	True	NM_001204698,NM_001014764,NM_014604,NM_031298	chr17,chr17,chr17,chr17	-,+,-,+	TAX1BP3,TMEM93,TAX1BP3,TMEM93	2372,2438,2372,2438
chr19:927475-927751	chr19	+	927729	927799	True	NM_138774,NM_005224	chr19,chr19	-,+	C19orf22,ARID3A	-14504,-1743
chr16:22559707-22561008	chr16	+	22560218	22560970	True	NR_003676,NR_027460	chr16,chr16	+,-	LOC653786,RRN3P3	-3259,-111182
chr16:22559707-22561008	chr16	+	21744090	21744645	False	NM_170664,NM_005849	chr16,chr16	+,-	OTOA,IGSF6	-27866,-80118
chr17:58209038-58210403	chr17	+	58209221	58210166	True	NM_000717,NR_027408	chr17,chr17	+,-	CA4,LOC653653	17135,-28941
chr19:18265111-18265402	chr19	+	18265277	18265441	True	NM_002866,NM_005027	chr19,chr19	-,+	RAB3A,PIK3R2	49483,-1312
chr11:63992670-63993600	chr11	+	63992893	63993469	True	NM_031472,NM_001160389,NM_001033678,NM_032344,NM_005528,NM_003377,NM_001160392,NM_001160393,NM_001160390,NM_001128613,NM_001128612	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,+,+,+,-,-,-,+,+	TRPT1,TRPT1,TRPT1,NUDT22,DNAJC4,VEGFB,TRPT1,TRPT1,TRPT1,NUDT22,NUDT22	307,307,307,268,4283,8796,307,-72,307,268,268
chr6:34522075-34523226	chr6	+	34522144	34523260	True	NM_001199583,NM_012391	chr6,chr6	+,-	PACSIN1,SPDEF	-39546,881
chr17:47441211-47442572	chr17	+	47441812	47442392	True	NM_014897,NR_034161,NM_001145365	chr17,chr17,chr17	-,+,-	ZNF652,FLJ40194,ZNF652	-1977,-116258,-2336
chr7:28500139-28501709	chr7	+	28500142	28501343	True	NM_004904,NM_175061	chr7,chr7	+,-	CREB5,JAZF1	-24959,-279705
chr20:43436439-43437952	chr20	+	43436474	43437881	True	NM_182970,NM_022358	chr20,chr20	-,+	RIMS4,KCNK15	1082,-62037
chr5:40681408-40681808	chr5	+	40681419	40681751	True	NM_012382,NM_000958	chr5,chr5	-,+	TTC33,PTGER4	74371,-1438
chr10:17685052-17685597	chr10	+	17685202	17685580	True	NM_003473,NM_014241,NR_037774	chr10,chr10,chr10	+,-,+	STAM,PTPLA,STAM	543,-25829,543
chr11:66278237-66279324	chr11	+	66278274	66279122	True	NM_024649,NM_207340	chr11,chr11	+,-	BBS1,ZDHHC24	-206,34607
chr11:67504841-67505510	chr11	+	67505141	67505363	True	NM_007103,NM_001031615	chr11,chr11	+,-	NDUFV1,ALDH3B2	-130869,-56456
chr7:30805661-30806500	chr7	+	30805722	30806454	True	NM_032222,NM_001202481	chr7,chr7	+,-	FAM188B,CRHR2	4578,-66003
chr11:65023820-65024560	chr11	+	65023948	65024065	True	NM_002689,NM_172230	chr11,chr11	+,-	POLA2,SYVN1	5366,-121945
chr2:190317142-190317605	chr2	+	190317347	190317589	True	NM_032168,NM_014585	chr2,chr2	+,-	WDR75,SLC40A1	-11252,128012
chr2:1414444-1415129	chr2	+	1414519	1415123	True	NM_175721,NM_175719,NM_012293,NM_175722,NM_000547	chr2,chr2,chr2,chr2,chr2	+,+,-,+,+	TPO,TPO,PXDN,TPO,TPO	3056,2109,333218,3056,2109
chr12:96788896-96789689	chr12	+	96789078	96789738	True	NM_001170464,NM_002595,NM_005230	chr12,chr12,chr12	-,-,+	CDK17,CDK17,ELK3	4678,4678,-200937
chr19:53835285-53836113	chr19	+	53835389	53835878	True	NM_138374,NM_033341	chr19,chr19	+,-	ZNF845,BIRC8	1123,-40514
chr2:130810995-130811263	chr2	+	130811005	130811271	True	NR_026758,NM_032144	chr2,chr2	-,+	LOC440905,RAB6C	-2301,-73821
chr2:130810995-130811263	chr2	-	132041423	132041497	False	NR_030728,NM_001077637	chr2,chr2	+,-	LOC440910,LOC150786	-4611,80284
chr2:130810995-130811263	chr2	+	131201719	131201773	False	NM_032357,NM_001079530	chr2,chr2	-,+	CCDC115,CFC1B	-101797,76893
chr2:130810995-130811263	chr2	-	131434897	131434951	False	NR_023391,NM_001079530	chr2,chr2	+,-	C2orf14,CFC1B	2671,-77646
chr19:57760305-57761759	chr19	+	57760341	57761566	True	NM_001023563,NM_001012729,NM_001145078	chr19,chr19,chr19	+,-,+	ZNF805,DUXA,ZNF805	-8347,-81485,-8347
chr16:46781109-46781454	chr16	+	46781157	46781501	True	NM_182493,NR_037620	chr16,chr16	-,+	MYLK3,ORC6	770,-57650
chr7:16833808-16834709	chr7	+	16833918	16834636	True	NM_006408,NM_014399	chr7,chr7	-,+	AGR2,TSPAN13	10160,-40618
chr1:24741313-24741907	chr1	+	24741409	24741889	True	NM_020448,NM_001199013,NM_001199012,NM_001199014,NM_178122	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	NIPAL3,C1orf201,C1orf201,C1orf201,C1orf201	355,-1147,-6,-1147,-1147
chr7:65218287-65219818	chr7	+	65219159	65219635	True	NR_003110,NM_000181,NR_002961	chr7,chr7,chr7	+,-,+	CCT6P1,GUSB,SNORA22	-3118,227716,877
chr10:88415199-88417040	chr10	+	88415283	88416978	True	NM_033282,NM_015045,NM_001030015	chr10,chr10,chr10	+,-,+	OPN4,WAPAL,OPN4	-1020,-133742,-1020
chrX:65423374-65423955	chrX	+	65423385	65423973	True	NM_014799,NM_007268	chrX,chrX	+,-	HEPH,VSIG4	-39327,-163418
chr20:18117542-18117860	chr20	+	18117541	18117796	True	NR_028402,NM_020536,NM_001164811,NM_021220	chr20,chr20,chr20,chr20	+,+,+,-	CSRP2BP,CSRP2BP,PET117,OVOL2	7946,5071,702,-79020
chr5:180670715-180670922	chr5	+	180670731	180670903	True	NR_002592,NM_006098,NR_002591,NM_201627	chr5,chr5,chr5,chr5	-,-,-,+	SNORD96A,GNB2L1,SNORD95,TRIM41	-1842,53,-355,-20476
chr2:9146097-9147032	chr2	+	9146293	9146979	True	NM_001135191,NM_138799	chr2,chr2	+,-	ASAP2,MBOAT2	199914,-2417
chr1:40237155-40237399	chr1	+	40237281	40237413	True	NM_022120,NM_001195007	chr1,chr1	-,+	OXCT2,PPIE	-261,-32815
chr1:40237155-40237399	chr1	-	39980142	39980274	False	NR_003929,NM_181809	chr1,chr1	-,+	PPIEL,BMP8A	45146,-22875
chr14:93583960-93585089	chr14	+	93584159	93584882	True	NM_001142594,NR_002808,NM_014216,NM_001142593	chr14,chr14,chr14,chr14	-,+,-,-	ITPK1,ITPK1-AS1,ITPK1,ITPK1	-1896,-50413,-1896,-1896
chr10:124136300-124137699	chr10	+	124136364	124137726	True	NM_001001974,NM_001010912,NM_001195608	chr10,chr10,chr10	+,-,+	PLEKHA1,C10orf120,PLEKHA1	-2333,321662,7858
chr5:59972050-59972404	chr5	+	59972277	59972423	True	NR_028509,NM_001145208	chr5,chr5	+,-	PART1,DEPDC1B	-188576,23620
chr3:18459438-18459836	chr3	+	18459476	18459768	True	NM_002971,NM_144633,NM_001195470	chr3,chr3,chr3	-,+,-	SATB1,KCNH8,SATB1	7113,730248,7113
chr8:41522340-41522559	chr8	+	41522344	41522556	True	NM_020478,NR_030161,NM_178819,NM_020480,NM_001142445	chr8,chr8,chr8,chr8,chr8	-,-,+,-,-	ANK1,MIR486,AGPAT6,ANK1,ANK1	298,-4318,-86688,298,298
chrX:119492722-119493464	chrX	+	119492766	119493440	True	NM_017938,NM_001142447,NM_012069	chrX,chrX,chrX	-,+,+	FAM70A,ATP1B4,ATP1B4	-47375,2499,2499
chr7:2717173-2717391	chr7	+	2717271	2717364	True	NM_133463,NM_152743	chr7,chr7	+,-	AMZ1,BRAT1	1798,-121879
chr10:38301450-38302129	chr10	+	38301737	38301947	True	NM_006974,NM_145011,NM_006954	chr10,chr10,chr10	+,-,+	ZNF33A,ZNF25,ZNF33A	-2217,-36284,-2217
chr17:42091912-42092182	chr17	+	42092015	42092220	True	NM_032376,NM_153006	chr17,chr17	-,+	TMEM101,NAGS	175,-10034
chr14:75469876-75470080	chr14	+	75469918	75470122	True	NM_002632,NM_014239	chr14,chr14	-,+	PGF,EIF2B2	-47627,-357
chr9:46303615-46303845	chr9	+	46303621	46303893	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2672891,383672
chr9:46303615-46303845	chr9	+	67712558	67712830	False	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	81409,213930
chr9:46303615-46303845	chr9	-	45079293	45079565	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-89108,-1448563
chr9:46303615-46303845	chr9	-	45814031	45814303	False	NM_001145196,NR_024060	chr9,chr9	-,+	FAM75A6,FAM27A	-2183301,-87053
chr9:46303615-46303845	chr9	-	46200334	46200606	False	NM_001145196,NR_024060	chr9,chr9	-,+	FAM75A6,FAM27A	-2569604,-473356
chr12:56658062-56658642	chr12	+	56658170	56658527	True	NM_173595,NM_144576,NM_001099337	chr12,chr12,chr12	-,+,+	ANKRD52,COQ10A,COQ10A	-6027,2114,2539
chr6:43043588-43043813	chr6	+	43043621	43043851	True	NM_002821,NM_015950,NM_152882,NM_152881,NM_152880	chr6,chr6,chr6,chr6,chr6	+,-,+,+,+	PTK7,MRPL2,PTK7,PTK7,PTK7	177,-16379,177,177,177
chr16:72031569-72032890	chr16	+	72031725	72032808	True	NM_001361,NM_181536	chr16,chr16	+,-	DHODH,PKD1L3	9834,1128
chr8:124889948-124891862	chr8	+	124890097	124891912	True	NM_004306,NM_001039112	chr8,chr8	-,+	ANXA13,FER1L6	-140450,-25929
chr12:14926510-14927130	chr12	+	14926700	14927170	True	NM_177925,NR_027716,NM_175054	chr12,chr12,chr12	+,+,-	H2AFJ,H2AFJ,HIST4H4	99,99,-2635
chr19:51811753-51812261	chr19	+	51811773	51812149	True	NM_001163922,NM_001101372	chr19,chr19	-,+	VSIG10L,IGLON5	33279,2952
chr12:128046697-128047265	chr12	+	128046864	128047229	True	NR_033970,NR_033987	chr12,chr12	-,+	LOC440117,FLJ37505	-687628,318932
chr11:118048345-118049718	chr11	+	118048527	118049564	True	NM_004588,NM_019894	chr11,chr11	-,+	SCN2B,TMPRSS4	-1190,-100859
chr19:10304820-10305056	chr19	+	10304828	10305016	True	NM_001130823,NR_036206,NM_001379	chr19,chr19,chr19	-,+,-	DNMT1,MIR4322,DNMT1	789,36072,789
chrX:67916064-67917038	chrX	+	67916192	67917090	True	NM_001142504,NM_002547	chrX,chrX	+,-	STARD8,OPHN1	-2761,-262893
chr14:98443177-98443972	chr14	+	98443297	98443942	True	NR_015430,NM_182560	chr14,chr14	-,+	C14orf64,C14orf177	570,734007
chr22:38711357-38711788	chr22	+	38711434	38711822	True	NM_152221,NM_001161573,NM_001894	chr22,chr22,chr22	-,+,-	CSNK1E,MAFF,CSNK1E	1641,-112458,2317
chr2:143884417-143884972	chr2	+	143884813	143884976	True	NM_018460,NM_018557	chr2,chr2	+,-	ARHGAP15,LRP1B	1922,-995543
chr2:189154495-189156338	chr2	+	189154509	189156166	True	NR_030287,NM_052952,NM_016315	chr2,chr2,chr2	+,-,+	MIR561,DIRC1,GULP1	6052,498722,1223
chr19:15077023-15079000	chr19	+	15077887	15078883	True	NM_005071,NM_012377	chr19,chr19	-,+	SLC1A6,OR7C2	4899,-25638
chr7:150786505-150787043	chr7	+	150786554	150787058	True	NM_031434,NM_031946,NM_001042535,NM_001136044,NM_033015,NM_006712	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,-,-,-	TMUB1,AGAP3,AGAP3,TMUB1,FASTK,FASTK	-6141,-2779,-2779,-5934,-8603,-8603
chr1:118481171-118481702	chr1	+	118481260	118481744	True	NM_001135589,NM_006784,NM_017686	chr1,chr1,chr1	-,+,-	GDAP2,WDR3,GDAP2	-8958,-8946,-8958
chr12:4219278-4220696	chr12	+	4219326	4220620	True	NM_001759,NM_020367	chr12,chr12	+,-	CCND2,PARP11	162281,-236718
chr9:139949735-139949935	chr9	+	139949735	139949835	True	NM_207309,NM_001246,NM_203468,NM_015392	chr9,chr9,chr9,chr9	+,-,-,-	UAP1L1,ENTPD2,ENTPD2,NPDC1	22117,-1230,-1230,-9059
chr7:129708547-129709915	chr7	+	129709083	129709849	True	NM_016478,NM_014997	chr7,chr7	-,+	ZC3HC1,KLHDC10	-17850,499
chr15:34787645-34788117	chr15	+	34787651	34788013	True	NM_175741,NR_036050	chr15,chr15	+,-	C15orf55,MIR1233-1	-149636,32609
chr8:53478394-53478614	chr8	+	53478398	53478580	True	NM_207413,NM_005285	chr8,chr8	-,+	FAM150A,NPBWR1	-377,373887
chr15:72980845-72982242	chr15	+	72981109	72981718	True	NR_002780,NM_033028	chr15,chr15	-,+	HIGD2B,BBS4	-2619,-2636
chr2:115934915-115935498	chr2	+	115934915	115935266	True	NR_036580,NM_001004360	chr2,chr2	-,+	LOC389023,DPP10	-15995,-15285
chr4:9634061-9634733	chr4	+	9634199	9634743	True	NR_031688,NM_000798	chr4,chr4	-,+	MIR548I2,DRD5	-76262,148514
chr16:29470539-29470745	chr16	+	29470558	29470620	True	NM_177552,NR_037608,NR_037609,NM_001017390,NM_001014999,NR_002556,NM_001015000,NM_024044,NM_001031827,NR_002454,NM_001039182,NR_002557,NM_178044	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,-,+,+,-,+,-,-,+	SULT1A3,SLX1A-SULT1A3,SLX1B-SULT1A4,SULT1A4,SLX1A,LOC388242,SLX1A,SLX1B,BOLA2,LOC606724,BOLA2B,LOC613038,SLX1B	586,-4197,-4197,586,-4787,8329,-4787,-4787,-4273,-9943,-4273,8329,-4787
chr16:29470539-29470745	chr16	+	30209900	30209962	False	NM_177552,NR_037608,NR_037609,NM_001017390,NM_001014999,NR_002556,NM_001015000,NM_024044,NM_001031827,NR_002454,NM_001039182,NR_002557,NM_178044	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,-,+,+,-,+,-,-,+	SULT1A3,SLX1A-SULT1A3,SLX1B-SULT1A4,SULT1A4,SLX1A,LOC388242,SLX1A,SLX1B,BOLA2,LOC606724,BOLA2B,LOC613038,SLX1B	586,-4197,-4197,586,-4787,8336,-4787,-4787,-4273,-9946,-4273,8336,-4787
chr5:102201322-102201582	chr5	+	102201410	102201562	True	NM_138821,NM_138822,NM_001177306,NR_033440,NM_017676,NM_138766,NM_000919	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,-,+,+	PAM,PAM,PAM,PAM,GIN1,PAM,PAM	15,15,15,15,254330,15,15
chr9:117852970-117853207	chr9	+	117853089	117853177	True	NM_017418,NM_002160	chr9,chr9	+,-	DEC1,TNC	50919,27359
chr8:103136758-103137108	chr8	+	103136866	103137103	True	NM_001040630,NM_001040627,NM_001040626,NM_001040625,NM_001040624,NM_001040629,NM_001040628,NM_024410	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,-,-,-,+	NCALD,NCALD,NCALD,NCALD,NCALD,NCALD,NCALD,ODF1	87,-304,-304,-304,-304,-304,-304,426744
chr2:224813824-224814588	chr2	+	224813982	224814634	True	NM_020830,NM_022915	chr2,chr2	-,+	WDFY1,MRPL44	-3930,7486
chr3:126705850-126707499	chr3	+	126706054	126707340	True	NM_032242,NM_052883	chr3,chr3	+,-	PLXNA1,TXNRD3	96,-332087
chr19:39971823-39972134	chr19	+	39971927	39972039	True	NM_001001563,NM_001020	chr19,chr19	+,-	TIMM50,RPS16	-926,-45309
chr10:135383603-135383850	chr10	+	135383613	135383726	True	NM_001143764,NR_033789,NM_001143763,NM_130784,NM_000773	chr10,chr10,chr10,chr10,chr10	-,-,-,-,+	SYCE1,SPRNP1,SYCE1,SYCE1,CYP2E1	-4475,-151,-4475,-737,-42804
chr10:135383603-135383850	chr10	+	135238818	135238931	False	NR_002934,NM_001012508	chr10,chr10	+,-	LOC619207,SPRN	28500,-697
chr11:20044749-20045063	chr11	+	20044932	20045078	True	NM_001111019,NM_001029865	chr11,chr11	+,-	NAV2,DBX1	-347,136842
chrX:133930979-133931215	chrX	+	133931132	133931252	True	NM_001170779,NM_001170782,NM_001166599,NM_001170757,NM_001170756,NM_001166600,NM_001170783,NM_001170784,NM_001170780,NM_138819,NM_001170781,NM_145284	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,-,-,-,-,+,+,+,+,+,-	FAM122C,FAM122C,FAM122B,FAM122B,FAM122B,FAM122B,FAM122C,FAM122C,FAM122C,FAM122C,FAM122C,FAM122B	9970,9952,7,60,-747,60,9970,9952,-740,9970,9970,-747
chr6:43967218-43967614	chr6	+	43967356	43967662	True	NM_001171992,NM_153246,NM_032111	chr6,chr6,chr6	+,+,-	C6orf223,C6orf223,MRPL14	674,674,127579
chr12:85673504-85673717	chr12	+	85673558	85673636	True	NM_001100917,NM_006982	chr12,chr12	-,+	TSPAN19,ALX1	-243503,399
chr5:756251-756594	chr5	+	756408	756576	True	NM_001166260,NM_007030	chr5,chr5	+,-	TRIP13,TPPP	136392,-62898
chr3:139063052-139063358	chr3	+	139063071	139063331	True	NM_004766,NM_020191	chr3,chr3	-,+	COPB2,MRPS22	45241,-261
chr7:143743653-143744355	chr7	+	143743880	143744372	True	NM_014719,NM_012365	chr7,chr7	-,+	FAM115A,OR2A5	-144708,3122
chr11:76320395-76321946	chr11	+	76320704	76321852	True	NM_020193,NM_005512	chr11,chr11	+,-	C11orf30,LRRC32	-164694,59242
chr8:74883636-74884045	chr8	+	74883676	74883995	True	NM_001204858,NM_001204859,NM_001204857,NM_017866,NM_005648,NR_033334,NM_001204863,NM_001204862,NM_001204861,NM_001204860,NM_001204864,NM_001040613	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,+,-,+,-,-,-,-,-,+	TCEB1,TCEB1,TCEB1,TMEM70,TCEB1,TMEM70,TCEB1,TCEB1,TCEB1,TCEB1,TCEB1,TMEM70	578,578,578,4381,578,4381,578,199,199,578,578,4381
chr15:65671914-65672628	chr15	+	65672014	65672650	True	NM_004884,NM_016395	chr15,chr15	-,+	IGDCC3,PTPLAD1	-1636,150176
chr4:49337030-49338639	chr4	+	49337297	49337374	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-349086,-428482
chr4:49337030-49338639	chr4	+	49522311	49522388	False	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-534100,-613496
chr4:49337030-49338639	chr4	-	49276920	49276997	False	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-288707,-368105
chr3:141497480-141499475	chr3	+	141497656	141499515	True	NM_001178140,NM_139209	chr3,chr3	-,+	TFDP2,GRK7	219764,-664
chr10:105110979-105111481	chr10	+	105111075	105111364	True	NM_006951,NM_032154,NM_001011663	chr10,chr10,chr10	+,-,-	TAF5,PCGF6,PCGF6	16359,-184,-184
chr11:111842754-111843490	chr11	+	111842938	111843494	True	NM_001885,NM_033425	chr11,chr11	-,+	CRYAB,DIXDC1	-60465,4538
chr10:23726960-23727332	chr10	+	23726960	23727302	True	NM_153714,NM_001145373	chr10,chr10	-,+	C10orf67,OTUD1	-93188,895
chr11:1706463-1707209	chr11	+	1706529	1707219	True	NR_026642,NM_001012416	chr11,chr11	-,+	FAM99B,KRTAP5-6	0,11205
chr11:1706463-1707209	chr11	-	1687082	1687132	False	NR_026642,NR_026643	chr11,chr11	-,+	FAM99B,FAM99A	19777,-304
chr11:61717393-61718298	chr11	+	61717540	61718298	True	NM_001139443,NM_004183,NM_002032	chr11,chr11,chr11	+,+,-	BEST1,BEST1,FTH1	-235,-235,16884
chr17:65238385-65239520	chr17	+	65238854	65239562	True	NM_014877,NM_012417	chr17,chr17	-,+	HELZ,PITPNC1	1815,134361
chr15:76207499-76208163	chr15	+	76207624	76207798	True	NR_003136,NR_037623	chr15,chr15	-,+	FBXO22OS,FBXO22	17729,-11484
chr12:54938704-54939193	chr12	+	54938827	54939231	True	NM_006741,NM_000924	chr12,chr12	-,+	PPP1R1A,PDE1B	43262,3945
chr6:26446059-26447249	chr6	+	26446284	26447296	True	NM_197974,NM_006994,NM_003543	chr6,chr6,chr6	+,+,-	BTN3A3,BTN3A3,HIST1H4H	-5635,-5635,-160557
chr19:43890942-43891845	chr19	+	43891632	43891886	True	NM_031451,NM_014400	chr19,chr19	+,-	TEX101,LYPD3	876,77995
chr5:121294921-121296532	chr5	+	121295308	121296208	True	NM_152546,NM_001178102	chr5,chr5	+,-	SRFBP1,LOX	1447,116770
chr3:113882659-113882990	chr3	+	113882677	113882755	True	NM_000796,NM_024638	chr3,chr3	-,+	DRD3,QTRTD1	15202,-107121
chr14:69445905-69446169	chr14	+	69445988	69446194	True	NM_001130004,NM_001193360,NM_001130005,NM_001102	chr14,chr14,chr14,chr14	-,+,-,-	ACTN1,EXD2,ACTN1,ACTN1	-61,211999,-61,-61
chr1:55229798-55230173	chr1	+	55229869	55230089	True	NM_001110533,NM_152268	chr1,chr1	+,-	C1orf177,PARS2	41646,187
chr1:208412321-208413057	chr1	+	208412325	208413080	True	NR_026817,NM_025179	chr1,chr1	+,-	LOC148696,PLXNA2	-420652,4635
chr17:40612048-40612926	chr17	+	40612047	40612905	True	NM_001130021,NM_001130020,NM_005177,NM_012232	chr17,chr17,chr17,chr17	+,+,+,-	ATP6V0A1,ATP6V0A1,ATP6V0A1,PTRF	-1236,-1236,-1236,-36709
chr1:43613819-43614401	chr1	+	43613892	43614458	True	NM_001101376,NM_006824	chr1,chr1	+,-	FAM183A,EBNA1BP2	-356,23586
chr12:53976542-53978054	chr12	+	53976655	53977711	True	NM_001130059,NM_134324	chr12,chr12	-,+	ATF7,TARBP2	17150,-81337
chr3:125239411-125239613	chr3	+	125239411	125239493	True	NR_024250,NM_003794	chr3,chr3	+,-	LOC100125556,SNX4	395950,-353
chr4:86396373-86396684	chr4	+	86396490	86396704	True	NM_001025616,NM_014991	chr4,chr4	+,-	ARHGAP24,WDFY3	-257,-508946
chr11:65549638-65549901	chr11	+	65549764	65549950	True	NM_138368,NM_004561	chr11,chr11	-,+	DKFZp761E198,OVOL1	-1942,4578
chr1:43637243-43637985	chr1	+	43637250	43638032	True	NM_001159936,NM_001167965,NM_001167966,NR_030778,NM_152498,NM_006824	chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,+,+,-	EBNA1BP2,WDR65,WDR65,WDR65,WDR65,EBNA1BP2	259,-14,0,-14,-14,4
chr5:124216124-124216839	chr5	+	124216774	124216854	True	NM_004384,NM_020747	chr5,chr5	+,-	CSNK1G3,ZNF608	-1369032,-135969
chr19:45907765-45908030	chr19	+	45907816	45907892	True	NM_012099,NM_006663,NM_001142502	chr19,chr19,chr19	+,-,-	CD3EAP,PPP1R13L,PPP1R13L	1574,470,1765
chr8:80991901-80992572	chr8	+	80991980	80992601	True	NM_001025252,NM_001105539	chr8,chr8	-,+	TPD52,ZBTB10	459,405846
chr19:14015212-14015546	chr19	+	14015211	14015595	True	NM_024323,NM_017721	chr19,chr19	-,+	C19orf57,CC2D1A	1364,1360
chr14:97398393-97399079	chr14	+	97398572	97399072	True	NM_003384,NM_018036	chr14,chr14	+,-	VRK1,ATG2B	-134940,-568894
chr1:52828989-52829443	chr1	+	52829140	52829355	True	NM_032864,NM_032449	chr1,chr1	+,-	PRPF38A,CC2D1B	40863,2581
chr9:125330693-125331070	chr9	+	125330712	125331071	True	NM_001004454,NM_001004457	chr9,chr9	-,+	OR1L8,OR1N2	-30,-15314
chr17:48711832-48712151	chr17	+	48711832	48712031	True	NM_052855,NM_001144070,NM_003786	chr17,chr17,chr17	-,+,+	ANKRD40,ABCC3,ABCC3	73289,186,186
chr7:150747811-150748112	chr7	+	150747976	150748044	True	NM_004769,NM_001164410,NM_020321,NM_020322,NM_001199692,NM_003040,NM_004935	chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,-,+,+,+,+,-	ACCN3,CDK5,ACCN3,ACCN3,SLC4A2,SLC4A2,CDK5	-2422,7058,-2422,-2422,7254,8612,7058
chr17:40993564-40993971	chr17	+	40993626	40993996	True	NM_001158,NM_003734,NM_176863,NM_009590,NM_005789,NM_003766	chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,-	AOC2,AOC3,PSME3,AOC2,PSME3,BECN1	2612,9204,-8254,2612,-8254,-17316
chr3:157155483-157155683	chr3	+	157155510	157155676	True	NM_002852,NM_001167917	chr3,chr3	+,-	PTX3,VEPH1	-981,57669
chr6:158400138-158402095	chr6	+	158400403	158401992	True	NM_003898,NM_032861	chr6,chr6	+,-	SYNJ2,SERAC1	895,187370
chr4:68827389-68829042	chr4	+	68827566	68829042	True	NM_001114387,NR_015446,NM_182606	chr4,chr4,chr4	-,+,-	TMPRSS11A,FTLP10,TMPRSS11A	240,218967,240
chr3:138041480-138041978	chr3	+	138041511	138041977	True	NM_012219,NM_178130	chr3,chr3	+,-	MRAS,TXNDC6	24647,6801
chr8:37800190-37800576	chr8	+	37800269	37800567	True	NM_004095,NM_152413	chr8,chr8	+,-	EIF4EBP1,GOT1L1	87452,-2622
chr6:41747163-41747401	chr6	+	41747184	41747402	True	NM_001134493,NM_013397,NM_006653	chr6,chr6,chr6	+,+,-	TOMM6,PRICKLE4,FRS3	7778,1097,278
chr19:36499745-36500178	chr19	+	36499773	36499865	True	NM_198867,NM_032878,NM_001039876,NM_001042631	chr19,chr19,chr19,chr19	-,-,-,+	ALKBH6,ALKBH6,C19orf46,SDHAF1	5326,5326,-101,-13734
chr5:9540421-9540958	chr5	+	9540735	9540859	True	NM_003966,NR_003689	chr5,chr5	-,+	SEMA5A,SNORD123	5424,8079
chr8:21769454-21769847	chr8	+	21769563	21769701	True	NM_003974,NM_015024	chr8,chr8	-,+	DOK2,XPO7	1554,7478
chr7:120701148-120702762	chr7	+	120701507	120702743	True	NM_001105533,NM_012338	chr7,chr7	+,-	C7orf58,TSPAN12	-72126,-203330
chr7:44888305-44888624	chr7	+	44888382	44888447	True	NM_201436,NM_012412,NM_201516,NM_201517,NM_021130,NM_138635	chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,+,-	H2AFV,H2AFV,H2AFV,H2AFV,PPIA,H2AFV	-657,-657,-657,-657,-52198,-657
chr19:2251608-2251949	chr19	+	2251660	2251928	True	NR_036207,NM_144616,NM_000479	chr19,chr19,chr19	+,-,+	MIR4321,JSRP1,AMH	-1073,4544,-2598
chr19:50829120-50829579	chr19	+	50829274	50829556	True	NM_004977,NM_007121	chr19,chr19	-,+	KCNC3,NR1H2	3128,50128
chr22:50965611-50966507	chr22	+	50965725	50966115	True	NM_005138,NM_001953,NM_001169111,NM_001169110,NM_001014440,NM_152299,NM_001169109,NM_001113755,NM_001113756	chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,-,+,-,-,-	SCO2,TYMP,SCO2,SCO2,ODF3B,NCAPH2,SCO2,TYMP,TYMP	-1691,2449,-1692,-1151,4943,-19131,-857,2449,2193
chr11:89659755-89660001	chr11	+	89659806	89659893	True	NM_001105522	chr11	+	TRIM49L1	-2640
chr11:89659755-89660001	chr11	+	55032262	55032343	False	NM_001004700,NM_024114	chr11,chr11	-,+	OR4C11,TRIM48	339565,-2669
chr11:89659755-89660001	chr11	-	89650914	89651001	False	NM_001105522	chr11	-	TRIM49L1	2640
chr6:14765061-14765525	chr6	+	14765379	14765521	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	481005,897818
chr19:49531012-49531824	chr19	+	49531453	49531869	True	NR_004383,NR_024244,NM_033378,NM_033377,NM_000737	chr19,chr19,chr19,chr19,chr19	+,-,+,-,-	SNAR-G1,SNAR-G2,CGB2,CGB1,CGB	8407,3225,3260,8372,-3860
chr19:49531012-49531824	chr19	+	49556441	49556491	False	NM_033183,NM_033043,NM_033142	chr19,chr19,chr19	-,+,-	CGB8,CGB5,CGB7	-4073,-9390,2556
chr19:49531012-49531824	chr19	-	49543630	49543882	False	NR_024244,NM_033378,NR_004383,NM_033377,NM_033043,NM_033183	chr19,chr19,chr19,chr19,chr19,chr19	-,+,+,-,+,-	SNAR-G2,CGB2,SNAR-G1,CGB1,CGB5,CGB8	-8586,-8551,-3404,-3439,3219,8536
chr13:51658503-51659034	chr13	+	51658524	51659050	True	NR_003923,NM_145019	chr13,chr13	-,+	GUCY1B2,FAM124A	-18231,137456
chr7:97605637-97606932	chr7	+	97606167	97606940	True	NR_002822,NM_014916	chr7,chr7	-,+	MGC72080,LMTK2	-4529,129256
chr2:69176938-69178180	chr2	+	69176969	69178185	True	NM_182536,NM_019617	chr2,chr2	-,+	GKN2,GKN1	1968,23519
chr7:44240637-44240984	chr7	+	44240716	44240842	True	NM_006555,NM_000162	chr7,chr7	+,-	YKT6,GCK	-189,-11694
chrX:77154459-77154835	chrX	+	77154661	77154851	True	NM_032121,NM_001866	chrX,chrX	-,+	MAGT1,COX7B	-3596,109
chr16:19078505-19078871	chr16	+	19078599	19078795	True	NM_015092,NM_001190983,NM_016138	chr16,chr16,chr16	-,+,+	SMG1,COQ7,COQ7	-140873,443,121
chr17:33382970-33383555	chr17	+	33382999	33383294	True	NM_017559,NM_001017368	chr17,chr17	+,-	FNDC8,RFFL	65336,7516
chr20:49539207-49539467	chr20	+	49539408	49539468	True	NM_181442,NM_015339,NM_014484	chr20,chr20,chr20	-,-,+	ADNP,ADNP,MOCS3	8109,8109,35894
chr6:135834116-135835243	chr6	+	135834525	135835280	True	NM_001134832,NR_026805	chr6,chr6	-,+	AHI1,NCRNA00271	-15622,-15643
chr13:60970889-60971234	chr13	+	60970891	60971158	True	NM_001042517,NM_030794,NM_001146071,NM_001146070	chr13,chr13,chr13,chr13	-,+,+,+	DIAPH3,TDRD3,TDRD3,TDRD3	-232772,-351,-351,268
chr11:60678573-60679303	chr11	+	60678581	60679005	True	NM_014502,NM_024092	chr11,chr11	-,+	PRPF19,TMEM109	-4520,2365
chr6:20404617-20404873	chr6	+	20404658	20404809	True	NM_001949,NM_001080480	chr6,chr6	+,-	E2F3,MBOAT1	-2572,-191988
chr7:95401228-95401778	chr7	+	95401499	95401725	True	NM_001135556,NM_001135557,NM_002612,NM_004411	chr7,chr7,chr7,chr7	+,+,-,+	DYNC1I1,DYNC1I1,PDK4,DYNC1I1	92,92,-175574,92
chr10:43571217-43571537	chr10	+	43571306	43571534	True	NM_020975,NM_020630,NM_145313	chr10,chr10,chr10	+,+,-	RET,RET,RASGEF1A	982,982,190883
chr10:70944319-70945348	chr10	+	70944628	70945247	True	NM_001057,NM_003171	chr10,chr10	-,+	TACR2,SUPV3L1	231478,-4686
chrX:152242841-152243077	chrX	+	152242920	152243124	True	NM_032882,NM_001170944	chrX,chrX	+,+	PNMA6A,LOC100287428	-2132,-2152
chrX:152242841-152243077	chrX	+	152340382	152340586	False	NM_032882	chrX	-	PNMA6A	-94424
chr1:248458724-248459400	chr1	+	248458760	248459020	True	NM_001004692,NM_001001918	chr1,chr1	-,+	OR2T12,OR14C36	-52,53056
chr12:77265398-77266566	chr12	+	77265706	77266414	True	NM_001321,NM_015336	chr12,chr12	-,+	CSRP2,ZDHHC17	6435,-107903
chr16:56553908-56554712	chr16	+	56554089	56554657	True	NM_031885,NM_032935	chr16,chr16	-,+	BBS2,MT4	-81,44303
chr1:63246647-63248346	chr1	+	63246883	63248369	True	NM_033407,NM_178221,NM_032852	chr1,chr1,chr1	-,+,+	DOCK7,ATG4C,ATG4C	-92914,1407,1407
chr7:33179933-33181593	chr7	+	33179941	33181413	True	NM_203288,NM_198428	chr7,chr7	-,+	RP9,BBS9	-30939,-10840
chr14:74084088-74085016	chr14	+	74084196	74084991	True	NM_001037162,NM_203309	chr14,chr14	+,-	ACOT6,HEATR4	-708,-58545
chr2:42411546-42412213	chr2	+	42411603	42412226	True	NM_019063,NM_004718	chr2,chr2	+,-	EML4,COX7A2L	-15164,176194
chr1:6258485-6258922	chr1	+	6258543	6258959	True	NM_000983,NM_207396	chr1,chr1	-,+	RPL22,RNF207	770,7229
chr10:5567825-5568840	chr10	+	5568111	5568741	True	NM_017422,NM_005185	chr10,chr10	-,+	CALML5,CALML3	-26578,-1238
chr20:652269-652659	chr20	+	652294	652458	True	NM_033129,NM_001042353	chr20,chr20	-,+	SCRT2,FAM110A	4415,161897
chr18:55252351-55252920	chr18	+	55252530	55252960	True	NM_001012515,NM_004852,NM_000140	chr18,chr18,chr18	-,+,-	FECH,ONECUT2,FECH	1059,-149673,1059
chr6:33771015-33771459	chr6	+	33771361	33771497	True	NM_002224,NM_002418,NM_001184698,NM_001040109	chr6,chr6,chr6,chr6	+,-,-,-	ITPR3,MLN,MLN,MLN	-182256,346,346,346
chr6:43153943-43154159	chr6	+	43154012	43154094	True	NM_006443,NM_015089	chr6,chr6	-,+	C6orf108,CUL9	43167,-4141
chr2:175629920-175630536	chr2	+	175629957	175630583	True	NM_024583,NM_000079,NM_001039523	chr2,chr2,chr2	+,-,-	SCRN3,CHRNA1,CHRNA1	-369552,-757,-757
chr3:121316667-121317485	chr3	+	121316915	121317505	True	NM_199420,NM_016298	chr3,chr3	-,+	POLQ,FBXO40	-52062,-4797
chr18:9883244-9883855	chr18	+	9883247	9883633	True	NM_005134,NM_001098529,NM_032243	chr18,chr18,chr18	-,+,+	PPP4R1,TXNDC2,TXNDC2	-268647,2089,2089
chr1:36563993-36564369	chr1	+	36564063	36564363	True	NM_005202,NM_017825	chr1,chr1	-,+	COL8A2,ADPRHL2	1537,-9661
chr14:24617106-24617745	chr14	+	24617189	24617761	True	NM_017999,NM_016049,NM_002818	chr14,chr14,chr14	+,-,-	RNF31,FAM158A,PSME2	-581,-6392,-1334
chr1:174124453-174125235	chr1	+	174124629	174125240	True	NM_172071,NM_014857	chr1,chr1	-,+	RC3H1,RABGAP1L	-162419,3393
chr10:98947346-98948112	chr10	+	98947567	98948139	True	NM_005479,NM_003061	chr10,chr10	+,-	FRAT1,SLIT1	130882,-1884
chr11:58604557-58605745	chr11	+	58604729	58605767	True	NM_145016,NM_080661	chr11,chr11	-,+	GLYATL2,GLYATL1	6280,104954
chr6:31109263-31110937	chr6_mcf_hap5	+	2491694	2491748	False	NM_014069,NM_001077511	chr6_mcf_hap5,chr6_mcf_hap5	-,+	PSORS1C2,TCF19	-2622,16511
chr6:31109263-31110937	chr6	+	31109758	31109984	True	NM_014069,NM_001077511	chr6,chr6	-,+	PSORS1C2,TCF19	-2631,16318
chr6:31109263-31110937	chr6_mann_hap4	+	2458116	2458170	False	NM_014069,NM_001077511	chr6_mann_hap4,chr6_mann_hap4	-,+	PSORS1C2,TCF19	-2621,16510
chr12:7050556-7052124	chr12	+	7050577	7052173	True	NM_138425,NM_080548,NM_080549,NR_003010,NM_002831	chr12,chr12,chr12,chr12,chr12	+,+,+,-,+	C12orf57,PTPN6,PTPN6,SCARNA12,PTPN6	1029,3566,8260,24646,8260
chr12:56860760-56861772	chr12	+	56861060	56861564	True	NM_012064,NM_207344	chr12,chr12	-,+	MIP,SPRYD4	-12625,736
chr2:132119521-132120767	chr2	+	132119660	132120814	True	NM_001077637,NR_036499	chr2,chr2	-,+	LOC150786,LOC389043	967,39659
chr2:132119521-132120767	chr2	-	130738167	130739320	False	NR_036537,NM_032144	chr2,chr2	-,+	LOC100131320,RAB6C	-122,-983
chr22:18113447-18114578	chr22	+	18113719	18114291	True	NM_015367,NM_001039366,NM_001039367,NM_001696	chr22,chr22,chr22,chr22	+,-,-,-	BCL2L13,ATP6V1E1,ATP6V1E1,ATP6V1E1	7193,-2131,-2131,-2131
chr1:95540198-95540916	chr1	+	95540198	95540630	True	NM_001199679,NM_144988	chr1,chr1	+,-	TMEM56,ALG14	17442,-1691
chr2:121222487-121222771	chr2	+	121222496	121222786	True	NM_002193,NR_027181	chr2,chr2	+,-	INHBB,LOC84931	-118828,1189
chr19:51520250-51521046	chr19	+	51520349	51520849	True	NM_012315,NM_002776,NM_001136032,NM_145888,NM_001077500,NM_014441	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,+	KLK9,KLK10,KLK11,KLK10,KLK10,SIGLEC9	-7459,2483,9073,2155,2632,107287
chr6:21594871-21595148	chr6	+	21594951	21595125	True	NM_003107,NR_034143	chr6,chr6	+,-	SOX4,LOC729177	-1030,552347
chr1:244627382-244628428	chr1	+	244627495	244628195	True	NM_173807,NM_001126,NM_001130957	chr1,chr1,chr1	+,-,+	C1orf101,ADSS,C1orf101	-2883,-12059,-2883
chr13:37632294-37632909	chr13	+	37632500	37632927	True	NM_017569,NM_001014286,NM_181503	chr13,chr13,chr13	-,-,+	FAM48A,FAM48A,EXOSC8	978,978,-57876
chrY:14474970-14476008	chrY	+	14475202	14475885	True	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	298412,57557
chr7:99006768-99007013	chr7	+	99006840	99007062	True	NM_003910,NM_014891	chr7,chr7	+,-	BUD31,PDAP1	-290,-535
chr3:48282514-48282914	chr3	+	48282560	48282960	True	NM_016089,NM_201567	chr3,chr3	+,-	ZNF589,CDC25A	-15,-52759
chr13:76351872-76352661	chr13	+	76352130	76352708	True	NM_203497,NM_015842	chr13,chr13	-,+	COMMD6,LMO7	-240139,-17392
chr6:138427725-138428382	chr6	+	138427732	138428376	True	NM_022121,NM_020340	chr6,chr6	-,+	PERP,KIAA1244	334,54676
chr5:68538726-68539750	chr5	+	68538952	68539204	True	NM_176816,NM_001799	chr5,chr5	-,+	CCDC125,CDK7	77256,-8382
chr1:46770842-46771102	chr1	+	46771003	46771109	True	NM_006004,NM_006369	chr1,chr1	+,-	UQCRH,LRRC41	-1674,-1965
chr1:228602853-228603127	chr1	+	228602891	228602973	True	NM_001024940,NM_175055,NM_001134855,NM_145214,NM_016102	chr1,chr1,chr1,chr1,chr1	-,+,-,-,-	TRIM17,HIST3H2BB,TRIM17,TRIM11,TRIM17	1660,42834,1660,-8374,1660
chr2:44589740-44590812	chr2	+	44589758	44590265	True	NM_024766,NM_001171617,NM_006036,NM_001042386,NM_001171603,NM_001042385,NM_001171606,NM_001171613	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-,-,-	CAMKMT,PREPL,PREPL,PREPL,PREPL,PREPL,PREPL,PREPL	-766,-757,-1945,-2870,-757,-2870,-1058,-1058
chr19:46170935-46171449	chr19	+	46170939	46171367	True	NM_000164,NR_037512,NR_030372	chr19,chr19,chr19	+,-,+	GIPR,MIR642B,MIR642A	134,6949,6818
chr19:2271918-2272251	chr19	+	2272042	2272148	True	NM_004152,NM_198532	chr19,chr19	+,-	OAZ1,C19orf35	-2573,10083
chr10:49382873-49383073	chr10	+	49382932	49383058	True	NR_033178,NR_033172,NM_002750	chr10,chr10,chr10	-,-,+	FRMPD2,FRMPD2P1,MAPK8	232,232,226628
chr10:49382873-49383073	chr10	+	46675480	46675606	False	NR_027632,NM_015605	chr10,chr10	+,-	FAM35B,PTPN20B	222034,-34477
chr10:49382873-49383073	chr10	+	48862380	48862506	False	NR_033172,NM_153034	chr10,chr10	-,+	FRMPD2P1,ZNF488	232,-507342
chr17:72707364-72708698	chr17	+	72707439	72708491	True	NM_001163989,NM_139018	chr17,chr17	+,-	RAB37,CD300LF	24467,667
chr5:79599475-79600014	chr5	+	79599686	79599950	True	NM_032567,NR_004845	chr5,chr5	+,-	SPZ1,LOC644936	15839,-3389
chr16:67676528-67678100	chr16	+	67676559	67678121	True	NM_001013838,NM_001082486	chr16,chr16	+,-	RLTPR,ACD	908,16647
chrX:147088667-147088899	chrX	+	147088677	147088801	True	NM_152578,NR_024503	chrX,chrX	+,-	FMR1NB,FMR1-AS1	-25881,-85001
chr2:99760777-99761034	chr2	+	99760796	99760940	True	NM_182911,NM_144706	chr2,chr2	-,+	TSGA10,C2orf15	-2759,-2662
chr6:131498961-131499759	chr6	+	131498993	131499771	True	NM_001431,NM_016377	chr6,chr6	-,+	EPB41L2,AKAP7	-114531,-32583
chr3:196230917-196231341	chr3	+	196231234	196231356	True	NM_001105573,NM_152617	chr3,chr3	+,-	FBXO45,RNF168	64368,-595
chr8:104419125-104420247	chr8	+	104419189	104420064	True	NM_030780,NM_015420	chr8,chr8	-,+	SLC25A32,DCAF13	7461,6877
chr7:151108498-151108929	chr7	+	151108615	151108891	True	NR_034012,NR_034013,NM_198285	chr7,chr7,chr7	+,+,-	LOC100131176,LOC100131176,WDR86	-2344,-2344,-1491
chr22:38302764-38302966	chr22	+	38302841	38302977	True	NM_032561,NM_033386	chr22,chr22	-,+	C22orf23,MICALL1	46676,-546
chr12:6936185-6936938	chr12	+	6936230	6936848	True	NM_014262,NM_031299,NM_019858,NM_014449	chr12,chr12,chr12,chr12	+,-,+,+	LEPREL2,CDCA3,GPR162,GPR162	723,23658,-5318,-5318
chr11:2193032-2193549	chr11	+	2193178	2193538	True	NM_199293,NM_199292,NR_028044,NM_000360	chr11,chr11,chr11,chr11	-,-,+,-	TH,TH,IGF2AS,TH	-143,-143,-31471,-143
chr19:22879996-22880250	chr19	+	22879996	22880061	True	NM_020855,NM_001080409	chr19,chr19	+,-	ZNF492,ZNF99	-62925,72778
chr16:20702486-20703828	chr16	+	20702559	20703865	True	NM_202000,NM_052956	chr16,chr16	+,-	ACSM3,ACSM1	71446,19
chr8:89340478-89340714	chr8	+	89340491	89340763	True	NM_005941,NM_003821	chr8,chr8	-,+	MMP16,RIPK2	-774,1429211
chr9:130862229-130862523	chr9	+	130862346	130862532	True	NM_052901,NR_033374,NM_001006643,NM_001006642	chr9,chr9,chr9,chr9	+,-,+,+	SLC25A25,LOC100289019,SLC25A25,SLC25A25	-1580,18531,-1561,-8269
chr7:140946566-140947930	chr7	+	140946805	140947827	True	NM_053035,NM_001195278	chr7,chr7	-,+	MRPS33,LOC100131199	-232024,-172824
chr8:103563904-103565310	chr8	+	103563913	103564839	True	NM_024410,NM_001032282	chr8,chr8	+,-	ODF1,KLF10	-116,101379
chr14:47120555-47120909	chr14	+	47120637	47120925	True	NM_020937,NM_080746	chr14,chr14	+,-	FANCM,RPL10L	-1515552,153
chr17:21907119-21907644	chr17	+	21907173	21907665	True	NM_001113434,NR_027084	chr17,chr17	-,+	C17orf51,FLJ36000	-452232,-3162
chr17:21907119-21907644	chr17	+	21902527	21902577	False	NM_001113434,NR_027084	chr17,chr17	-,+	C17orf51,FLJ36000	-447586,1484
chr17:21907119-21907644	chr17	+	21904799	21905291	False	NM_001113434,NR_027084	chr17,chr17	-,+	C17orf51,FLJ36000	-449858,-788
chr9:138438671-138438938	chr9	+	138438711	138438973	True	NM_014582,NM_144654	chr9,chr9	+,-	OBP2A,C9orf116	-777,-46950
chr9:138438671-138438938	chr9	-	136083640	136083690	False	NM_014581,NR_001275	chr9,chr9	-,+	OBP2B,CELP	988,-125765
chr17:48712921-48714316	chr17	+	48713357	48714186	True	NM_052855,NM_001144070,NM_003786	chr17,chr17,chr17	-,+,+	ANKRD40,ABCC3,ABCC3	71134,-1190,-1190
chr19:47248942-47249146	chr19	+	47248941	47249133	True	NM_013403,NM_001039877,NM_001039885,NM_024301	chr19,chr19,chr19,chr19	-,-,+,+	STRN4,STRN4,FKRP,FKRP	637,637,169,169
chr16:623007-623248	chr16	+	623148	623272	True	NM_004204,NM_176677,NR_024121,NM_148920	chr16,chr16,chr16,chr16	+,+,-,+	PIGQ,NHLRC4,NCRNA00235,PIGQ	-3195,-6167,-45741,-3195
chrX:17650745-17651304	chrX	+	17650984	17651320	True	NM_001136024,NR_033348	chrX,chrX	+,-	NHS,RAI2	2092,227685
chr7:74307415-74309302	chr7	+	74307518	74307796	True	NR_027777,NR_027776,NR_027775,NM_001025202	chr7,chr7,chr7,chr7	+,+,+,-	PMS2P5,PMS2P5,PMS2P5,STAG3L2	-683,-683,-683,-787
chr7:74307415-74309302	chr7	-	99932630	99932680	False	NR_036570,NR_036569,NR_003613	chr7,chr7,chr7	+,+,-	PILRB,PILRB,PMS2P1	1007,1007,1300
chr11:124669000-124669376	chr11	+	124669067	124669323	True	NM_006176,NM_024631	chr11,chr11	+,-	NRGN,C11orf61	-59289,1026
chr18:29598969-29599451	chr18	+	29599080	29599496	True	NM_014939,NM_017831	chr18,chr18	-,+	TRAPPC8,RNF125	-75989,-686
chr19:43423324-43424596	chr19	+	43423828	43424050	True	NM_002782,NM_001031850,NR_036584	chr19,chr19,chr19	-,-,+	PSG6,PSG6,LOC100289650	-1839,-1785,-97869
chr10:112067564-112068597	chr10	+	112067710	112068285	True	NM_005962,NM_005871	chr10,chr10	+,-	MXI1,SMNDC1	-82009,-3003
chr19:14545540-14545773	chr19	+	14545545	14545817	True	NM_005804,NM_213560,NM_002741	chr19,chr19,chr19	-,+,+	DDX39A,PKN1,PKN1	-15350,5268,-1430
chr16:34405566-34406795	chr16	+	34405641	34406793	True	NR_027080,NR_002837	chr16,chr16	+,-	LOC283914,UBE2MP1	190993,-879
chr4:52870467-52871675	chr4	+	52870784	52871438	True	NM_145263,NM_001024611	chr4,chr4	+,-	SPATA18,LRRC66	46154,12398
chr2:105472736-105473139	chr2	+	105472877	105473139	True	NM_006236,NR_037883	chr2,chr2	+,-	POU3F3,LOC100506421	-959,-4943
chr6:14884026-14884422	chr6	+	14884193	14884387	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	362139,778952
chr19:36232866-36233512	chr19	+	36233039	36233521	True	NM_024660,NM_144987,NM_172341,NM_001040425,NM_019104	chr19,chr19,chr19,chr19,chr19	-,-,+,-,+	IGFLR1,U2AF1L4,PSENEN,U2AF1L4,LIN37	-64,2865,2972,2865,5990
chr13:28492659-28493062	chr13	+	28492801	28493000	True	NM_000209,NM_001265	chr13,chr13	+,-	PDX1,CDX2	1167,50367
chr3:50304967-50306682	chr3	+	50304968	50306382	True	NM_006764,NM_004636,NM_001005914	chr3,chr3,chr3	-,+,+	IFRD2,SEMA3B,SEMA3B	23694,21,21
chr1:10535775-10536639	chr1	+	10535911	10536551	True	NM_213566,NM_004565,NM_004401	chr1,chr1,chr1	-,+,-	DFFA,PEX14,DFFA	-3298,-968,-3298
chr9:107525984-107526377	chr9	+	107526066	107526226	True	NM_018376,NM_001001956	chr9,chr9	+,-	NIPSNAP3B,OR13C9	224,-145581
chr1:33008843-33009436	chr1	+	33008974	33009236	True	NM_178547,NM_001040441	chr1,chr1	-,+	ZBTB8OS,ZBTB8A	107011,-4260
chr16:65612813-65613164	chr16	+	65612903	65613158	True	NM_001795,NR_027755	chr16,chr16	+,-	CDH5,LOC283867	787366,-2700
chr7:103829776-103830672	chr7	+	103829966	103830695	True	NM_002553,NM_199000	chr7,chr7	-,+	ORC5,LHFPL3	17856,138408
chr2:236404599-236404886	chr2	+	236404668	236404854	True	NM_014914,NM_001037131,NM_001485	chr2,chr2,chr2	+,+,-	AGAP1,AGAP1,GBX2	-1983,-1983,671848
chr12:118812111-118813743	chr12	+	118812335	118813566	True	NM_022491,NM_016281	chr12,chr12	+,-	SUDS3,TAOK3	791,-1585
chr5:65017294-65017643	chr5	+	65017294	65017499	True	NM_020726,NM_019072	chr5,chr5	+,-	NLN,SGTB	523,495
chrX:49370234-49371167	chrX	+	49370585	49371215	True	NM_003785,NM_001040663,NM_001468	chrX,chrX,chrX	-,+,+	PAGE1,GAGE1,GAGE1	89445,-7028,-7028
chr10:74110653-74111367	chr10	+	74110680	74111288	True	NM_019058,NM_017626,NM_001002762	chr10,chr10,chr10	+,-,-	DDIT4,DNAJB12,DNAJB12	-77054,3669,3669
chr1:240763157-240763746	chr1	+	240763303	240763753	True	NM_022469,NM_020066	chr1,chr1	-,+	GREM2,FMN2	11765,-508176
chr19:3046025-3046350	chr19	+	3046025	3046397	True	NM_001144761,NM_002067	chr19,chr19	-,+	TLE2,GNA11	1286,48010
chr13:28544758-28545261	chr13	+	28544838	28545274	True	NM_001265,NR_002162	chr13,chr13	-,+	CDX2,ATP5EP2	-1521,-25546
chr11:124977857-124978655	chr11	+	124978011	124978712	True	NM_198277,NM_001080546	chr11,chr11	+,-	SLC37A2,TMEM218	-45050,-4806
chr6:132022304-132022740	chr7	+	143956716	143956843	False	NR_002158,NM_198495,NM_001005328,NR_002157	chr7,chr7,chr7,chr7	-,-,-,-	OR2A20P,CTAGE4,OR2A7,OR2A9P	-8020,9606,5,-8168
chr6:132022304-132022740	chr6	+	132022486	132022663	True	NM_030908,NM_005021,NM_001145659	chr6,chr6,chr6	-,+,-	OR2A4,ENPP3,CTAGE9	5,-64095,9551
chr10:97355684-97356813	chr10	+	97356593	97356849	True	NM_024991,NM_001098175	chr10,chr10	-,+	SORBS1,ENTPD1	-35422,114686
chr1:113032040-113033202	chr1	+	113032247	113033056	True	NR_036210,NM_024494	chr1,chr1	-,+	MIR4256,WNT2B	-27792,18313
chr11:111943510-111944351	chr11	+	111943705	111944367	True	NM_138789,NM_001082969,NM_018195,NM_001082619,NM_001082970	chr11,chr11,chr11,chr11,chr11	-,+,+,-,+	PIH1D2,C11orf57,C11orf57,PIH1D2,C11orf57	578,600,600,578,600
chr5:93961862-93963625	chr5	+	93962389	93963403	True	NM_001145678,NM_173665,NM_032290	chr5,chr5,chr5	-,-,+	KIAA0825,KIAA0825,ANKRD32	-8080,-8080,-8056
chr12:49712855-49713485	chr12	+	49712903	49713097	True	NM_001100620,NM_001008223,NM_005480	chr12,chr12,chr12	+,-,+	TROAP,C1QL4,TROAP	3873,17936,3873
chr15:48441131-48441509	chr15	+	48441181	48441481	True	NM_205850,NM_016132	chr15,chr15	+,-	SLC24A5,MYEF2	-28080,29127
chr9:14880524-14881021	chr9	+	14880760	14881059	True	NR_003920,NM_144966	chr9,chr9	+,-	LOC389705,FREM1	112265,29985
chrX:118369299-118369626	chrX	+	118369376	118369585	True	NM_006667,NM_020721	chrX,chrX	+,-	PGRMC1,KIAA1210	625,-84834
chr17:3374371-3374573	chr17	+	3374513	3374601	True	NM_001170696,NM_001170697,NM_001170695,NM_001170698,NM_001170699,NM_000049,NM_032598,NM_001128085	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,+,-,+	SPATA22,SPATA22,SPATA22,SPATA22,SPATA22,ASPA,SPATA22,ASPA	591,575,591,548,516,4694,490,2802
chr16:3075348-3075970	chr16	+	3075374	3076008	True	NM_001142350,NM_024339,NM_017885,NM_001103175,NM_001002017,NM_001002018,NM_021195,NM_016639	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,-,-,-,-,-,+	THOC6,THOC6,HCFC1R1,CCDC64B,HCFC1R1,HCFC1R1,CLDN6,TNFRSF12A	-1403,-1403,-1087,9584,-1087,-1087,-7186,-5122
chr19:58545984-58546339	chr19	+	58546203	58546363	True	NM_182572,NM_025027	chr19,chr19	+,-	ZSCAN1,ZNF606	-820,-31489
chr11:120975387-120975922	chr11	+	120975475	120975912	True	NM_012101,NM_005422	chr11,chr11	-,+	TRIM29,TECTA	-966612,-2151
chr8:72986150-72987565	chr8	+	72986226	72987581	True	NM_007332,NR_033651	chr8,chr8	-,+	TRPA1,LOC100132891	288,-229928
chr12:4826085-4826904	chr12	+	4826170	4826951	True	NM_006422,NM_017417	chr12,chr12	-,+	AKAP3,GALNT8	-71827,2800
chr1:185286363-185286732	chr1	+	185286456	185286752	True	NM_017673,NM_006469	chr1,chr1	+,-	SWT1,IVNS1ABP	-160216,-3
chr11:60043038-60044287	chr11	+	60043135	60044301	True	NM_148975,NM_024021,NM_022349	chr11,chr11,chr11	+,+,-	MS4A4A,MS4A4A,MS4A6A	3837,5784,-92461
chr17:71188442-71188648	chr17	+	71188532	71188610	True	NM_018714,NM_001098832	chr17,chr17	+,-	COG1,FAM104A	562,39973
chr21:34542760-34543700	chr21	+	34543018	34543608	True	NR_024102,NM_000874	chr21,chr21	-,+	C21orf54,IFNAR2	-477,58622
chr8:70854818-70855126	chr8	+	70854818	70855057	True	NM_001128206,NM_030958	chr8,chr8	+,-	SULF1,SLCO5A1	-449841,-107519
chr19:3047424-3047946	chr19	+	3047576	3047969	True	NM_001144761,NM_002067	chr19,chr19	-,+	TLE2,GNA11	15,46438
chr11:100566329-100567175	chr11	+	100566328	100566687	True	NM_001202474,NM_152432	chr11,chr11	-,+	PGR,ARHGAP42	433158,-7978
chr12:861777-861986	chr12	+	861875	861937	True	NM_001184985,NM_016533,NM_018979,NM_213655,NM_014823	chr12,chr12,chr12,chr12,chr12	+,-,+,+,+	WNK1,NINJ2,WNK1,WNK1,WNK1	151,-89120,151,151,151
chr3:178254493-178254806	chr3	+	178254493	178254793	True	NM_022470,NM_181361	chr3,chr3	-,+	ZMAT3,KCNMB2	534913,-327
chr1:11986631-11986973	chr1	+	11986683	11986855	True	NM_000302,NM_138346	chr1,chr1	+,-	PLOD1,KIAA2013	7868,-198
chr22:19841446-19842171	chr22	+	19841613	19842149	True	NM_024627,NM_000754,NM_053004	chr22,chr22,chr22	-,+,-	C22orf29,COMT,GNB1L	272,87113,363
chr3:50339304-50339540	chr3	+	50339436	50339550	True	NM_001200016,NM_001200029,NM_003549,NM_153282,NM_153283,NM_033159,NM_012191,NM_001200018,NM_153285,NM_007312,NM_001200030,NM_153215,NM_001200031,NM_006764,NM_001200032	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,-,-,-,-,-,-,-,+,-,-,-	NAT6,HYAL3,HYAL3,HYAL1,HYAL1,HYAL1,NAT6,NAT6,HYAL1,HYAL1,HYAL3,C3orf45,HYAL3,IFRD2,HYAL3	-2584,-3143,-2537,1504,1504,1504,-2584,-3116,1504,1504,-2537,-22969,-2537,-9410,-2537
chr2:215886108-215886421	chr2	+	215886140	215886407	True	NM_004044,NM_015657	chr2,chr2	+,-	ATIC,ABCA12	290271,10468
chr15:84892095-84894011	chr15	+	84892284	84893505	True	NR_027001,NR_033738	chr15,chr15	-,+	LOC388152,LOC440300	5472,-31737
chr15:84892095-84894011	chr15	+	85771390	85772611	False	NM_006738,NM_014300	chr15,chr15	+,-	AKAP13,SEC11A	151259,-511716
chr15:84892095-84894011	chr15	-	82950178	82951399	False	NR_026811,NR_033936,NR_033579	chr15,chr15,chr15	+,+,-	LOC80154,LOC727849,LOC440297	-5414,-5443,35080
chr15:84892095-84894011	chr15	+	83165069	83165949	False	NR_026811,NR_033579	chr15,chr15	-,+	LOC80154,LOC440297	17004,-35089
chr2:27866964-27868754	chr2	+	27867237	27868442	True	NR_026735,NM_024584	chr2,chr2	+,-	GPN1,CCDC121	-15432,-15339
chr12:122324173-122324897	chr12	+	122324409	122324734	True	NM_001171993,NM_002813	chr12,chr12	-,+	HPD,PSMD9	1842,1911
chr5:767489-768485	chr5	+	767497	768210	True	NM_001166260,NM_007030	chr5,chr5	+,-	TRIP13,TPPP	124758,-73987
chr5:767489-768485	chr5	+	878114	879169	False	NM_001009877,NM_001166260	chr5,chr5	-,+	BRD9,TRIP13	13556,13799
chr6:14741989-14742581	chr6	+	14742055	14742619	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	503907,920720
chr6:83072571-83072779	chr6	+	83072645	83072759	True	NM_001166392,NM_006670,NM_015525	chr6,chr6,chr6	+,+,-	TPBG,TPBG,IBTK	1201,163,-115197
chr2:63278106-63278392	chr2	+	63278216	63278424	True	NR_027069,NM_014562,NM_001199770,NR_033389	chr2,chr2,chr2,chr2	-,+,+,-	LOC100132215,OTX1,OTX1,LOC100132215	-3370,-330,-1075,-2560
chr5:141020854-141021093	chr5	+	141020924	141021040	True	NM_001130029,NM_033449,NM_173828,NM_003883	chr5,chr5,chr5,chr5	+,-,+,-	RELL2,FCHSD1,RELL2,HDAC3	-4458,9996,-4458,-4501
chr19:45752239-45752928	chr19	+	45752257	45752749	True	NM_031417,NM_001199867,NM_138568	chr19,chr19,chr19	+,+,-	MARK4,MARK4,EXOC3L2	1766,1766,-14788
chr6:55444842-55445359	chr6	+	55444901	55445141	True	NM_207410,NM_019036,NM_001042406	chr6,chr6,chr6	+,-,-	GFRAL,HMGCLL1,HMGCLL1	-252685,-889,-889
chr10:99185048-99185447	chr10	+	99185201	99185465	True	NM_002629,NM_016046	chr10,chr10	+,-	PGAM1,EXOSC1	561,20357
chr11:76742878-76744299	chr11	+	76743134	76744163	True	NM_182833,NM_138706	chr11,chr11	-,+	GDPD4,B3GNT6	254361,1271
chr19:2744973-2745633	chr19	+	2745622	2745682	True	NM_003249,NM_213568,NM_144564	chr19,chr19,chr19	+,-,-	THOP1,SLC39A3,SLC39A3	39823,-5548,-5548
chr19:58071270-58071675	chr19	+	58071283	58071603	True	NM_001039654,NM_001010879	chr19,chr19	-,+	ZNF550,ZIK1	-3558,24024
chr22:38379844-38380172	chr22	+	38379847	38380095	True	NM_006941,NM_021974	chr22,chr22	-,+	SOX10,POLR2F	494,-30224
chr8:7336650-7337260	chr8	+	7336663	7337290	True	NM_080389,NM_001040702,NM_001040703,NM_001040704,NM_152250,NM_152251	chr8,chr8,chr8,chr8,chr8,chr8	-,-,+,-,+,-	DEFB104A,DEFB104B,DEFB105B,DEFB106B,DEFB105A,DEFB106A	-4059,-4059,7952,6669,7952,6669
chr8:7336650-7337260	chr8	-	7689298	7689925	False	NM_080389,NM_001040702,NM_001040703,NM_001040704,NM_152250,NM_152251	chr8,chr8,chr8,chr8,chr8,chr8	+,+,-,+,-,+	DEFB104A,DEFB104B,DEFB105B,DEFB106B,DEFB105A,DEFB106A	4067,4067,-7938,-6655,-7938,-6655
chrX:153797869-153798539	chrX	+	153797894	153798408	True	NM_001042351,NR_027401,NR_027402	chrX,chrX,chrX	-,+,+	G6PD,NCRNA00204,NCRNA00204B	-22107,1070,1070
chrX:153797869-153798539	chrX	-	153862518	153863032	False	NR_027401,NM_139250,NR_027402	chrX,chrX,chrX	-,+,-	NCRNA00204,CTAG1A,NCRNA00204B	-1070,-49151,-1070
chr3:49508231-49509960	chr3	+	49508383	49509925	True	NM_001177639,NM_001177638,NM_001177635,NM_001177634,NM_001177637,NM_001177636,NM_004393,NM_001165928,NM_032316,NM_001177644,NM_001177640,NM_001177641,NM_001177642,NM_001177643	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,+,+,+,+,-,+,+,+,+,+	DAG1,DAG1,DAG1,DAG1,DAG1,DAG1,DAG1,DAG1,NICN1,DAG1,DAG1,DAG1,DAG1,DAG1	-869,-869,-869,-869,-869,-869,-869,-869,-41626,-869,-869,-869,-869,-2288
chr4:84406447-84407328	chr4	+	84406520	84407043	True	NM_139076,NM_016067	chr4,chr4	-,+	FAM175A,MRPS18C	-230,-29461
chr16:20925423-20926704	chr16	+	20925499	20926442	True	NM_001128302,NM_173475	chr16,chr16	+,-	LYRM1,DCUN1D3	-13475,-13938
chr20:237298-238820	chr20	+	237297	238641	True	NM_207469,NM_153269	chr20,chr20	+,-	DEFB132,C20orf96	13,32799
chr4:1241266-1241548	chr4	+	1241401	1241541	True	NM_001012614,NR_033339,NM_001328	chr4,chr4,chr4	-,+,-	CTBP1,C4orf42,CTBP1	1417,1686,1417
chr1:11104978-11105415	chr1	+	11105014	11105292	True	NM_006610,NM_007375,NM_139208	chr1,chr1,chr1	-,+,-	MASP2,TARDBP,MASP2	2054,-32386,2054
chr14:105219930-105220155	chr14	+	105219933	105220147	True	NM_005163,NM_021709,NM_006427	chr14,chr14,chr14	-,+,+	AKT1,SIVA1,SIVA1	39841,-514,-514
chr2:175200725-175201021	chr2	+	175200866	175200956	True	NM_001145250,NM_004882	chr2,chr2	+,-	SP9,CIR1	-1096,59537
chr11:124266765-124267683	chr11	+	124266811	124267599	True	NM_001005198,NM_001005467	chr11,chr11	+,-	OR8G5,OR8B3	-132139,140
chr11:124266765-124267683	chr11	+	124252803	124252853	False	NM_001005468,NM_001005198	chr11,chr11	-,+	OR8B2,OR8G5	436,-118131
chrX:70285576-70287551	chrX	+	70286106	70287432	True	NM_001170931,NM_013346	chrX,chrX	+,-	FOXO4,SNX12	28566,849
chr6:84737780-84739730	chr6	+	84738438	84739572	True	NM_014895,NM_138409	chr6,chr6	-,+	KIAA1009,MRAP2	197813,3847
chr2:50535854-50536324	chr2	+	50535892	50536349	True	NM_138735,NM_006872	chr2,chr2	-,+	NRXN1,GTF2A1L	38596,-1691009
chr11:19741494-19742965	chr11	+	19741542	19742986	True	NM_182964,NR_015384,NM_145117	chr11,chr11,chr11	+,-,+	NAV2,LOC100126784,NAV2	-6712,-5396,-6712
chr9:139686017-139686361	chr9	+	139686171	139686251	True	NM_001039374,NM_032928,NR_024580	chr9,chr9,chr9	+,+,-	KIAA1984,TMEM141,LOC100131193	4538,-445,17099
chr1:6420500-6421140	chr1	+	6420647	6421183	True	NM_031475,NM_181865,NM_181866	chr1,chr1,chr1	+,-,-	ESPN,ACOT7,ACOT7	63664,99,-1643
chr7:42971554-42971960	chr7	+	42971620	42971946	True	NM_002787,NM_031903	chr7,chr7	-,+	PSMA2,MRPL32	-91,-8
chr19:2254456-2255491	chr19	+	2254916	2255506	True	NR_036207,NM_000479,NM_144616	chr19,chr19,chr19	+,+,-	MIR4321,AMH,JSRP1	-4329,-5854,966
chr20:21104907-21105419	chr20	+	21105075	21105352	True	NM_033176,NM_001163023,NM_001163022,NM_018474	chr20,chr20,chr20,chr20	-,+,+,+	NKX2-4,PLK1S1,PLK1S1,PLK1S1	272754,1271,1271,1271
chr1:176176803-176178069	chr1	+	176176842	176177881	True	NM_021936,NM_001001740,NM_022457	chr1,chr1,chr1	+,-,-	PAPPA2,RFWD2,RFWD2	254425,-472,-472
chr1:64246622-64247900	chr1	+	64246683	64247709	True	NM_001083592,NM_014288,NM_005012	chr1,chr1,chr1	+,-,+	ROR1,ITGB3BP,ROR1	-7044,-257848,-7044
chr11:233375-234708	chr11	+	233558	234762	True	NM_002817,NM_175932,NM_001017524,NM_012239	chr11,chr11,chr11,chr11	+,+,-,-	PSMD13,PSMD13,SIRT3,SIRT3	2045,2045,1655,1655
chr12:8396518-8398153	chr12	+	8396534	8397570	True	NR_024254,NR_026788	chr12,chr12	-,+	LOC653113,FAM66C	-992,-63780
chr10:105678022-105678931	chr10	+	105678335	105678873	True	NM_024928,NM_014720	chr10,chr10	-,+	OBFC1,SLK	-290,48596
chr19:29444997-29445953	chr19	+	29445168	29445944	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	10093,258242
chr5:156533698-156534761	chr5	+	156533801	156534763	True	NM_005546,NM_032782	chr5,chr5	+,-	ITK,HAVCR2	73143,1425
chr4:980468-980700	chr4	+	980566	980650	True	NM_022042,NM_000203,NM_134425,NM_213613	chr4,chr4,chr4,chr4	-,+,-,-	SLC26A1,IDUA,SLC26A1,SLC26A1	6583,134,6583,6624
chr10:104519077-104520224	chr10	+	104519250	104520090	True	NM_004311,NM_017787,NM_001083913	chr10,chr10,chr10	-,+,+	ARL3,C10orf26,C10orf26	-45060,15797,-15580
chr8:105564617-105565457	chr8	+	105564773	105565228	True	NM_001135703,NM_030788	chr8,chr8	-,+	LRP12,TM7SF4	36075,-212777
chr14:53197370-53198246	chr14	+	53197517	53198024	True	NM_014584,NM_001130701,NM_145251	chr14,chr14,chr14	-,+,+	ERO1L,STYX,STYX	-35098,-689,-689
chr1:39351060-39351370	chr1	+	39351059	39351385	True	NR_037633,NR_037637,NR_037636,NR_037635,NR_037634,NM_030772,NM_001136275	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,-,+	GJA9-MYCBP,GJA9-MYCBP,GJA9-MYCBP,GJA9-MYCBP,GJA9-MYCBP,GJA9,AKIRIN1	-3761,-3761,-3761,-3761,-3761,-3761,105530
chr9:131869216-131870390	chr9	+	131869656	131870328	True	NR_028048,NM_000755,NM_178000,NM_021131,NM_178003,NM_001193397,NM_178001	chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,-,+,+,+,+,+	CRAT,CRAT,PPP2R4,PPP2R4,PPP2R4,PPP2R4,PPP2R4	2792,2792,3264,2899,3264,3638,3264
chr3:52270239-52271959	chr3	+	52270436	52271880	True	NM_001122870,NM_007284,NM_144641	chr3,chr3,chr3	+,-,+	PPM1M,TWF2,PPM1M	8305,1353,7928
chr20:45181845-45183538	chr20	+	45181966	45183491	True	NM_030777,NM_080721	chr20,chr20	+,-	SLC2A10,C20orf123	154787,-2753
chr12:53398275-53399196	chr12	+	53398604	53399044	True	NM_001417,NR_033854	chr12,chr12	+,-	EIF4B,LOC283335	1017,49232
chr17:19141761-19142582	chr17	+	19141774	19142438	True	NM_014964,NM_148921,NM_001102664,NR_031591	chr17,chr17,chr17,chr17	+,+,+,-	EPN2,EPN2,EPN2,MIR1180	-1135,-1135,-1135,105499
chr11:1592099-1592299	chr11	+	1592173	1592345	True	NM_004420,NR_021489	chr11,chr11	-,+	DUSP8,LOC338651	855,1625
chr22:46408992-46409458	chr22	+	46409149	46409435	True	NR_027036,NR_027240	chr22,chr22	-,+	LOC100271722,LOC730668	31363,-6704
chr4:185750354-185750960	chr4	+	185750475	185750938	True	NM_152683,NM_001995	chr4,chr4	+,-	CCDC111,ACSL1	-179771,-3260
chr2:121225971-121227478	chr2	+	121225972	121227476	True	NM_002193,NR_027181	chr2,chr2	+,-	INHBB,LOC84931	-122304,-2047
chr17:42216652-42217058	chr17	+	42216758	42216858	True	NM_001171251,NM_005474,NM_024032	chr17,chr17,chr17	+,-,+	C17orf53,HDAC5,C17orf53	2415,-15744,2415
chr2:165977405-165977817	chr2	+	165977587	165977851	True	NM_001040142,NM_001081676	chr2,chr2	+,-	SCN2A,SCN3A	118060,82776
chr3:176915168-176915405	chr3	+	176915213	176915297	True	NM_024665,NM_181361	chr3,chr3	-,+	TBL1XR1,KCNMB2	-165,1338926
chr5:77660086-77660694	chr5	+	77660321	77660580	True	NM_003664,NM_004866	chr5,chr5	-,+	AP3B1,SCAMP1	-69793,-4033
chr13:50572437-50572811	chr13	+	50572439	50572756	True	NM_005798,NM_052811,NR_037407,NM_001007278,NM_213590	chr13,chr13,chr13,chr13,chr13	+,+,-,+,+	TRIM13,TRIM13,MIR3613,TRIM13,TRIM13	-1359,-1359,-1802,-1359,-1359
chr4:7941785-7942049	chr4	+	7941794	7942000	True	NM_001134647,NR_026892,NM_198595	chr4,chr4,chr4	-,+,-	AFAP1,AFAP1-AS1,AFAP1	-141,-186028,-141
chr9:124132056-124132326	chr9	+	124132080	124132288	True	NM_004099,NM_000177,NM_198194	chr9,chr9,chr9	-,+,-	STOM,GSN,STOM	307,-70052,307
chr20:23617143-23617923	chr20	+	23617269	23617947	True	NM_000099,NR_001279	chr20,chr20	-,+	CST3,CSTT	677,-117537
chr19:40807990-40808911	chr19	+	40808486	40808886	True	NM_001031696,NM_001626	chr19,chr19	+,-	PLD3,AKT2	45445,-17221
chr19:893888-894420	chr19	+	893949	894040	True	NM_005481,NM_032551	chr19,chr19	-,+	MED16,KISS1R	-731,23301
chr4:25023273-25023952	chr4	+	25023571	25023841	True	NR_037934,NM_018176	chr4,chr4	+,-	LOC285540,LGI2	138452,8623
chr19:49140220-49140460	chr19	+	49140359	49140485	True	NM_001217,NM_001352,NR_004401	chr19,chr19,chr19	-,-,+	CA11,DBP,SEC1	9016,204,810
chr14:96727752-96728056	chr14	+	96727754	96728076	True	NM_018036,NM_000710	chr14,chr14	-,+	ATG2B,BDKRB1	101652,-5246
chr15:50716370-50716700	chr15	+	50716418	50716716	True	NM_005154,NM_181427,NM_001128611,NM_001128610	chr15,chr15,chr15,chr15	+,-,+,+	USP8,GABPB1,USP8,USP8	-14,-68813,-14,-14
chr12:107714367-107714777	chr12	+	107714371	107714767	True	NM_001018072,NM_004075	chr12,chr12	+,-	BTBD11,CRY1	-2225,-226773
chr17:15604306-15605720	chr17	+	15604344	15605059	True	NM_006470,NM_001130842,NM_020652	chr17,chr17,chr17	-,+,+	TRIM16,ZNF286A,ZNF286A	-18151,-1505,-1505
chr17:15604306-15605720	chr17	-	18583546	18584049	False	NM_001145045,NM_001037330,NR_026718	chr17,chr17,chr17	-,+,-	ZNF286B,TRIM16L,FOXO3B	1582,41352,-7052
chr12:28524114-28524706	chr12	+	28524204	28524754	True	NM_018318,NM_002820	chr12,chr12	+,-	CCDC91,PTHLH	-114130,-399288
chr13:30009652-30010521	chr13	+	30009657	30010429	True	NM_015233,NM_003045	chr13,chr13	+,-	MTUS2,SLC7A1	-6931,159446
chrX:10577654-10577916	chrX	+	10577654	10577744	True	NM_000381,NM_001830	chrX,chrX	-,+	MID1,CLCN4	10984,-452723
chr14:55476280-55476830	chr14	+	55476463	55476881	True	NM_001008396,NM_080867	chr14,chr14	-,+	WDHD1,SOCS4	16994,16962
chr19:14016001-14016484	chr19	+	14016007	14016502	True	NM_024323,NM_017721	chr19,chr19	-,+	C19orf57,CC2D1A	457,453
chr21:46873706-46873936	chr21	+	46873709	46873983	True	NM_130444,NR_027498,NM_030582	chr21,chr21,chr21	+,-,+	COL18A1,NCRNA00175,COL18A1	1440,-28724,1440
chr2:44066352-44068323	chr2	+	44066442	44068258	True	NM_022436,NM_022437	chr2,chr2	-,+	ABCG5,ABCG8	-484,-397
chr5:55292330-55293134	chr5	+	55292404	55293138	True	NM_002184,NM_001190981,NM_175767,NM_139017	chr5,chr5,chr5,chr5	-,-,-,+	IL6ST,IL6ST,IL6ST,IL31RA	-1583,-1583,-1583,-145128
chr3:42007064-42008178	chr3	+	42007065	42007721	True	NM_001042646,NM_017886	chr3,chr3	+,-	TRAK1,ULK4	125024,-3405
chr11:120196344-120196830	chr11	+	120196459	120196867	True	NM_001198674,NM_001198675,NM_001198672,NM_001198673,NM_001198670,NM_001198671,NM_012101,NM_174926	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,+,-,+	TMEM136,TMEM136,TMEM136,TMEM136,TMEM136,TMEM136,TRIM29,TMEM136	-672,-672,-672,-672,-672,-672,-187596,-672
chr15:84766795-84768541	chr15	+	84767003	84768318	True	NR_027001,NR_036652	chr15,chr15	-,+	LOC388152,LOC648809	130652,-18119
chr9:114392917-114393235	chr9	+	114392918	114393206	True	NM_004125,NM_001015882,NR_037148,NR_034087	chr9,chr9,chr9,chr9	+,+,+,-	DNAJC25-GNG10,DNAJC25,DNAJC25,C9orf29	425,425,425,-17085
chr2:48809301-48811012	chr2	+	48809359	48810573	True	NM_001198594,NM_000233	chr2,chr2	+,-	STON1-GTF2A1L,LHCGR	-1684,172363
chr3:57676086-57677678	chr3	+	57676513	57677648	True	NM_007159,NM_152678	chr3,chr3	+,-	SLMAP,FAM116A	65525,1225
chr14:104388138-104388354	chr14	+	104388146	104388230	True	NM_001127393,NM_153046,NM_004894	chr14,chr14,chr14	-,+,-	C14orf2,TDRD9,C14orf2	-243,6586,-243
chr19:52798731-52799064	chr19	+	52798827	52798959	True	NM_001102657,NM_144684	chr19,chr19	-,+	ZNF836,ZNF480	-123931,1466
chr10:70319299-70320129	chr10	+	70319384	70320064	True	NM_030625,NM_152707	chr10,chr10	+,-	TET1,SLC25A16	52,-32104
chr7:752036-752261	chr7	+	752035	752167	True	NM_001164762,NM_002735,NM_001164761,NM_017802	chr7,chr7,chr7,chr7	-,-,-,+	PRKAR1B,PRKAR1B,PRKAR1B,HEATR2	460,44,727,14170
chr7:148296656-148297985	chr7	+	148296860	148297852	True	NM_145304,NM_001203249	chr7,chr7	+,-	C7orf33,EZH2	-9254,282805
chr17:41926019-41926490	chr17	+	41926039	41926507	True	NR_003562,NM_001168324,NM_001168323,NM_001168322,NM_145273	chr17,chr17,chr17,chr17,chr17	-,+,+,+,+	MPP3,CD300LG,CD300LG,CD300LG,CD300LG	-15492,-1574,-1574,-1574,-1574
chr4:129996887-129997775	chr4	+	129997036	129997826	True	NM_144643,NM_173487	chr4,chr4	-,+	SCLT1,C4orf33	16995,17002
chr13:113952684-113953177	chr13	+	113952748	113953141	True	NM_024719,NM_005561	chr13,chr13	-,+	GRTP1,LAMP1	65385,-1334
chrX:133681243-133681565	chrX	+	133681243	133681606	True	NR_029962,NR_029946,NR_024607,NR_030399,NM_000194,NR_030227,NR_030587,NR_030228	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,+,-,-,-	MIR450A1,MIR424,MGC16121,MIR542,HPRT1,MIR450A2,MIR450B,MIR503	-6782,-502,-583,-5776,-87131,-6606,-6951,-815
chr11:1075134-1075419	chr11	+	1075383	1075445	True	NM_002457,NM_005961	chr11,chr11	+,-	MUC2,MUC6	-559,-38677
chr9:127622530-127623458	chr9	+	127622564	127623381	True	NM_007209,NM_030978,NM_001045476	chr9,chr9,chr9	-,+,+	RPL35,ARPC5L,WDR38	909,8102,-6860
chr2:158295406-158295842	chr2	+	158295406	158295877	True	NM_014568,NM_004288	chr2,chr2	+,-	GALNT5,CYTIP	-181127,4777
chr12:26274592-26275048	chr12	+	26274610	26274998	True	NM_001164746,NM_030762	chr12,chr12	+,-	RASSF8,BHLHE41	-69174,3055
chr8:145578412-145579015	chr8	+	145578476	145578830	True	NM_024531,NM_012162,NR_015428,NM_024555	chr8,chr8,chr8,chr8	+,-,-,-	GPR172A,FBXL6,C8ORFK29,FBXL6	3394,3352,29,3352
chr3:9405299-9406076	chr3	+	9405345	9405985	True	NM_001114092,NM_015453,NR_027007	chr3,chr3,chr3	+,+,-	THUMPD3,THUMPD3,LOC440944	-686,-686,33252
chr5:134092898-134093816	chr5	+	134093245	134093844	True	NM_014829,NM_016103	chr5,chr5	+,-	DDX46,SAR1B	616,-124712
chr3:87275062-87275871	chr3	+	87275100	87275681	True	NM_014043,NM_000306	chr3,chr3	+,-	CHMP2B,POU1F1	731,50109
chr9:99177938-99178527	chr9	+	99178066	99178260	True	NM_153695,NM_014282	chr9,chr9	-,+	ZNF367,HABP4	2459,34153
chr22:38428521-38429646	chr22	+	38428538	38429266	True	NM_001039583,NM_006941	chr22,chr22	+,-	PICK1,SOX10	23995,-47999
chr3:196161088-196162024	chr3	+	196161255	196161613	True	NM_001105573,NM_015562	chr3,chr3	+,-	FBXO45,UBXN7	134111,-1910
chr22:38864155-38864432	chr22	+	38864198	38864276	True	NM_016657,NM_006855,NM_152868	chr22,chr22,chr22	+,+,-	KDELR3,KDELR3,KCNJ4	-166,-166,-12995
chr22:39474369-39474879	chr22	+	39474387	39474695	True	NM_021822,NM_175709	chr22,chr22	+,-	APOBEC3G,CBX7	-1428,73897
chr2:48794709-48796149	chr2	+	48794948	48796024	True	NM_000233,NM_172311	chr2,chr2	-,+	LHCGR,STON1-GTF2A1L	186906,134
chr17:61821313-61823077	chr17	+	61821313	61823017	True	NM_001003788,NM_153335,NM_007372,NM_001165969,NM_001165970,NM_001003787,NM_001003786	chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,-,-,-,-	STRADA,STRADA,DDX42,STRADA,STRADA,STRADA,STRADA	-1983,-1983,28549,-1983,-1983,-1983,-1983
chr1:19284293-19285093	chr1	+	19284315	19284999	True	NM_001136265,NM_016183	chr1,chr1	-,+	IFFO2,MRTO4	-1489,293075
chr12:82098948-82100390	chr12	+	82099265	82100202	True	NM_024560,NM_003625	chr12,chr12	+,-	ACSS3,PPFIA2	-627507,52967
chr3:149040842-149042014	chr3	+	149041046	149042052	True	NM_001184723,NM_004617,NM_138786	chr3,chr3,chr3	-,+,-	TM4SF18,TM4SF4,TM4SF18	9257,150315,9546
chr10:102235028-102235329	chr10	+	102235150	102235360	True	NM_015490,NM_003393	chr10,chr10	-,+	SEC31B,WNT8B	44285,-12396
chr3:12883117-12884011	chr3	+	12883294	12883606	True	NM_001007073,NM_012298,NR_002582,NM_000994,NM_001007074	chr3,chr3,chr3,chr3,chr3	-,+,-,-,-	RPL32,CAND2,SNORA7A,RPL32,RPL32	-213,-45174,-1345,-213,-1345
chr6:75972279-75974071	chr6	+	75972507	75973993	True	NR_029466,NM_001100409	chr6,chr6	-,+	COX7A2,SENP6	-18863,337628
chr14:32818170-32818634	chr14	+	32818181	32818667	True	NR_027263,NM_004274	chr14,chr14	-,+	C14orf128,AKAP6	-272276,-19753
chr17:61817352-61817590	chr17	+	61817398	61817598	True	NM_001003788,NM_153335,NM_007372,NM_001165969,NM_001165970,NM_001003787,NM_001003786	chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,-,-,-,-	STRADA,STRADA,DDX42,STRADA,STRADA,STRADA,STRADA	1782,1782,33968,1782,1782,1782,1782
chr2:128405456-128405842	chr2	+	128405627	128405843	True	NM_005291,NM_001161416,NR_027823,NM_001161417,NM_001161415	chr2,chr2,chr2,chr2,chr2	+,+,-,+,+	GPR17,GPR17,LIMS2,GPR17,GPR17	-2239,-2239,14,-2239,-2239
chr12:124198666-124199196	chr12	+	124198666	124199228	True	NM_012463,NM_001414	chr12,chr12	+,-	ATP6V0A2,EIF2B1	-1853,-80343
chr9:70860606-70861839	chr9	+	70860825	70861621	True	NR_015423,NM_201453	chr9,chr9	-,+	LOC572558,CBWD3	111191,-4044
chr9:70860606-70861839	chr9	-	69257811	69258609	False	NM_001085457,NM_001098805	chr9,chr9	-,+	CBWD6,ANKRD20A4	4041,123371
chr9:70860606-70861839	chr9	-	70485384	70486180	False	NM_001024916,NM_201453	chr9,chr9	-,-	CBWD5,CBWD3	4048,4054
chr14:69950618-69950941	chr14	+	69950627	69950791	True	NM_004450,NM_001161498	chr14,chr14	-,+	ERH,UPF0639	-85606,679
chr9:77569329-77569965	chr9	+	77569662	77570003	True	NM_012383,NM_017998	chr9,chr9	+,-	OSTF1,C9orf40	133394,-1860
chr19:13032776-13033663	chr19	+	13033200	13033706	True	NM_001105578,NM_004343	chr19,chr19	-,+	SYCE2,CALR	-3114,15707
chr1:100598157-100598414	chr1	+	100598199	100598463	True	NM_019083,NM_194292	chr1,chr1	+,-	CCDC76,SASS6	242,98
chr10:81963511-81964316	chr10	+	81963586	81964302	True	NM_145869,NM_145868,NM_001012973,NM_001157	chr10,chr10,chr10,chr10	-,-,+,-	ANXA11,ANXA11,PLAC9,ANXA11	1076,1076,-71379,1076
chr1:231295905-231296269	chr1	+	231295942	231296302	True	NM_152379,NM_001004342	chr1,chr1	-,+	C1orf131,TRIM67	80674,2371
chr8:6569431-6570622	chr8	+	6570012	6570306	True	NM_018361,NM_207411	chr8,chr8	+,-	AGPAT5,XKR5	-4195,122923
chr6:72597112-72598544	chr6	+	72597490	72598578	True	NR_026807,NM_014989	chr6,chr6	-,+	C6orf155,RIMS1	-467042,-898
chr6:150364457-150364984	chr6	+	150364513	150364937	True	NM_025218,NM_130900	chr6,chr6	+,-	ULBP1,RAET1L	-79421,-17845
chr8:27693227-27694753	chr8	+	27693437	27694777	True	NM_001017420,NM_018492	chr8,chr8	+,-	ESCO2,PBK	-61431,622
chr16:28413875-28414655	chr16	+	28413924	28414617	True	NM_003752,NM_018690,NM_001099661,NM_001037808	chr16,chr16,chr16,chr16	-,+,-,-	EIF3C,APOBR,EIF3CL,EIF3C	598,91375,595,598
chr16:28413875-28414655	chr16	-	28723329	28724022	False	NM_003752,NM_001099661,NM_001037808,NM_177536	chr16,chr16,chr16,chr16	+,+,+,-	EIF3C,EIF3CL,EIF3C,SULT1A1	-598,-595,-598,-88463
chr9:21964805-21965071	chr9	+	21964912	21964974	True	NM_058197,NR_024274	chr9,chr9	-,+	CDKN2A,C9orf53	9902,2163
chr15:73755801-73756757	chr15	+	73755800	73756757	True	NM_001042367,NM_005477	chr15,chr15	+,-	C15orf60,HCN4	-20358,-94195
chr9:79007630-79007936	chr9	+	79007851	79007983	True	NM_018339,NR_026890	chr9,chr9	-,+	RFK,RPSAP9	1519,5531
chr9:99330101-99331121	chr9	+	99330308	99330901	True	NM_001077181,NM_014282	chr9,chr9	-,+	CDC14B,HABP4	-1105,-117950
chr16:89226700-89227108	chr16	+	89226700	89227139	True	NR_024347,NM_005187	chr16,chr16	+,-	C16orf81,CBFA2T3	-1123,-183196
chr6:43044465-43044706	chr6	+	43044553	43044613	True	NM_002821,NM_015950,NM_152882,NM_152881,NM_152880	chr6,chr6,chr6,chr6,chr6	+,-,+,+,+	PTK7,MRPL2,PTK7,PTK7,PTK7	-575,-17311,-575,-575,-575
chrX:72162570-72162827	chrX	+	72162607	72162841	True	NR_034116,NR_026594,NR_026595	chrX,chrX,chrX	+,-,-	LOC100129407,NCRNA00246B,NCRNA00246	-4655,798,798
chrX:72162570-72162827	chrX	-	71997644	71997878	False	NR_034116,NM_001080851	chrX,chrX	-,+	LOC100129407,DMRTC1B	4656,66997
chr11:72435358-72436211	chr11	+	72435363	72435985	True	NM_015242,NM_001135190,NM_033388	chr11,chr11,chr11	-,-,+	ARAP1,ARAP1,ATG16L2	-1960,-1960,89465
chr15:88799246-88799594	chr15	+	88799249	88799566	True	NM_002530,NM_001012338,NM_022839,NM_001007156	chr15,chr15,chr15,chr15	-,-,+,-	NTRK3,NTRK3,MRPS11,NTRK3	145,145,211117,145
chr8:19535745-19537166	chr8	+	19535752	19537159	True	NR_024040,NM_018371,NM_018142	chr8,chr8,chr8	-,-,+	CSGALNACT1,CSGALNACT1,INTS10	3153,2986,137758
chr3:135685402-135685814	chr3	+	135685411	135685845	True	NM_002718,NM_001145417,NM_001190447	chr3,chr3,chr3	+,-,+	PPP2R3A,MSL2,PPP2R3A	-947,227515,-947
chr3:126314743-126315360	chr3	+	126314831	126315241	True	NR_034158,NM_001039783	chr3,chr3	+,-	C3orf46,TXNRD3IT1	65682,12215
chr5:98259679-98260573	chr5	+	98259981	98260407	True	NR_036530,NM_001270	chr5,chr5	+,-	LOC100289230,CHD1	4430,1881
chr4:151003004-151003804	chr4	+	151003179	151003847	True	NM_001040261,NM_001040260,NM_001199282,NR_036614	chr4,chr4,chr4,chr4	+,+,-,+	DCLK2,DCLK2,LRBA,DCLK2	-3812,-3812,932641,-3812
chr1:47800085-47800402	chr1	+	47800179	47800297	True	NM_001136140,NM_003035,NM_016308	chr1,chr1,chr1	+,-,+	CMPK1,STIL,CMPK1	-761,-20360,-761
chr9:37594828-37595856	chr9	+	37595215	37595895	True	NM_014907,NM_001001790,NM_001134485,NM_001134484	chr9,chr9,chr9,chr9	+,-,-,-	FRMPD1,TOMM5,TOMM5,TOMM5	55156,-2579,-2579,-2579
chr1:112184789-112185514	chr1	+	112184915	112185119	True	NM_002884,NR_034126	chr1,chr1	+,-	RAP1A,LOC100129269	-22568,-33975
chr10:31989580-31990107	chr10	+	31989648	31989919	True	NM_001174094,NM_018287	chr10,chr10	+,-	ZEB1,ARHGAP12	-379645,227902
chr10:51236455-51238142	chr10	+	51237799	51237870	True	NM_001077686,NM_002443	chr10,chr10	-,+	AGAP8,MSMB	8724,311682
chr10:51236455-51238142	chr10	+	46334189	46334260	False	NM_133446,NM_015262	chr10,chr10	-,+	AGAP4,FAM21C	8720,-111599
chr7:92861218-92861486	chr7	+	92861352	92861522	True	NM_024553,NM_017667,NM_001039372	chr7,chr7,chr7	+,+,-	CCDC132,CCDC132,HEPACAM2	130,130,-5570
chr5:34221003-34221986	chr5	+	34221029	34222013	True	NM_016568,NR_037951	chr5,chr5	+,-	RXFP3,C1QTNF3-AMACR	-284589,-96396
chr15:59060149-59061219	chr15	+	59060176	59061268	True	NM_001040450,NM_001110,NM_001040453	chr15,chr15,chr15	+,-,+	FAM63B,ADAM10,FAM63B	2124,-17999,2124
chr11:441141-441454	chr11	+	441152	441482	True	NM_030783,NM_001012302	chr11,chr11	+,-	PTDSS2,ANO9	8797,579
chr6:167276565-167277622	chr6	+	167276907	167277447	True	NM_007045,NM_001006932	chr6,chr6	+,-	FGFR1OP,RPS6KA2	135368,-1136
chr3:69144230-69145845	chr3	+	69144245	69145648	True	NM_006407,NM_198195	chr3,chr3	+,-	ARL6IP5,UBA3	-10206,-14721
chr16:740530-740758	chr16	+	740542	740608	True	NM_032259,NM_005861,NM_001005920	chr16,chr16,chr16	-,+,-	WDR24,STUB1,JMJD8	-142,-10478,-6103
chr15:42296039-42297114	chr15	+	42296165	42297110	True	NM_001080490,NM_001114633	chr15,chr15	-,+	PLA2G4E,PLA2G4B	5385,-165205
chr9:86151646-86152368	chr9	+	86151744	86152368	True	NM_174938,NM_001001551	chr9,chr9	-,+	FRMD3,C9orf103	1030,85664
chr14:24458686-24459305	chr14	+	24458867	24459343	True	NR_023922,NM_198083	chr14,chr14	-,+	C14orf167,DHRS4L2	-34569,-904
chr2:240320615-240321683	chr2	+	240320788	240321682	True	NR_036229,NM_006037	chr2,chr2	+,-	MIR4269,HDAC4	-93685,1020
chr4:77050909-77051224	chr4	+	77051040	77051121	True	NM_001179,NM_017426	chr4,chr4	+,-	ART3,NUP54	-55232,18587
chr17:75278248-75278772	chr17	+	75278261	75278807	True	NM_001113492,NM_001113491,NR_036200	chr17,chr17,chr17	+,+,-	SEPT9,SEPT9,MIR4316	5165,-820,114379
chr1:247494018-247494291	chr1	+	247494041	247494246	True	NM_032752,NM_173858	chr1,chr1	-,+	ZNF496,VN1R5	856,-74718
chr16:2892976-2893700	chr16	+	2893478	2893734	True	NR_026864,NM_145252	chr16,chr16	-,+	PRSS30P,ZG16B	-726,-13364
chr20:4981096-4981483	chr20	+	4981167	4981418	True	NM_005116,NR_028370,NM_203327	chr20,chr20,chr20	-,+,-	SLC23A2,PCNA-AS1,SLC23A2	782,118813,9576
chr3:149502262-149503946	chr3	+	149502374	149502948	True	NM_007282,NM_001144960	chr3,chr3	+,-	RNF13,C3orf16	27526,7712
chr13:50202500-50202846	chr13	+	50202511	50202892	True	NM_138450,NM_018191	chr13,chr13	+,-	ARL11,RCBTB1	-127,-42792
chr7:75420435-75421913	chr7	+	75420675	75421623	True	NM_001040456,NM_006072	chr7,chr7	+,-	RHBDD2,CCL26	86693,-1611
chr1:160173230-160173723	chr1	+	160173452	160173724	True	NM_003768,NR_028106	chr1,chr1	+,-	PEA15,DCAF8	1400,58603
chr20:42200132-42200502	chr20	+	42200159	42200505	True	NM_016276,NM_001199264,NM_001008901	chr20,chr20,chr20	+,+,-	SGK2,SGK2,GTSF1L	-5473,-6455,155187
chr16:55601252-55602814	chr16	+	55601292	55602850	True	NM_032330,NM_001025194	chr16,chr16	+,-	CAPNS2,CES1	-759,264275
chr22:22337890-22338627	chr22	+	22338169	22338320	True	NM_007128,NM_003935	chr22,chr22	+,-	VPREB1,TOP3B	260879,-1022
chr13:37599168-37599524	chr13	+	37599370	37599573	True	NM_181503,NM_013338	chr13,chr13	+,-	EXOSC8,ALG5	-24752,-25866
chr3:176914371-176914642	chr3	+	176914383	176914519	True	NM_024665,NM_181361	chr3,chr3	-,+	TBL1XR1,KCNMB2	579,1339704
chr15:25452086-25452370	chr15	+	25452151	25452415	True	NR_003315,NR_003314,NR_003313,NR_003312,NR_003311,NR_003310,NR_022010,NR_003495,NR_003308,NR_003309,NM_130838,NR_003342,NR_003307	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,+,-,+,+	SNORD115-23,SNORD115-22,SNORD115-21,SNORD115-20,SNORD115-19,SNORD115-18,PAR4,SNORD115-24,SNORD115-16,SNORD115-17,UBE3A,SNORD115-25,SNORD115-15	4527,2649,-793,-793,-2698,-2698,4423,6390,-7607,-2698,198288,8272,-793
chr16:88219806-88220024	chr16	+	88219931	88219991	True	NM_001173543,NM_001739	chr16,chr16	+,-	BANP,CA5A	-216358,-249819
chr12:105221583-105221964	chr12	+	105221583	105221965	True	NM_152318,NM_032148	chr12,chr12	+,-	C12orf45,SLC41A2	158132,100557
chr6:27704478-27706196	chr6	+	27704587	27706132	True	NM_003509,NM_003519	chr6,chr6	+,-	HIST1H2AI,HIST1H2BL	69844,69628
chr21:37430937-37431156	chr21	+	37431099	37431173	True	NM_017438,NM_001007259,NM_001757	chr21,chr21,chr21	-,-,+	SETD4,SETD4,CBR1	1693,1488,11111
chrX:99989444-99990508	chrX	+	99989597	99990388	True	NM_001325,NM_080737,NM_001129896,NM_001174068	chrX,chrX,chrX,chrX	+,-,-,-	CSTF2,SYTL4,SYTL4,SYTL4	84959,-3075,-2462,-3075
chr10:112696484-112696769	chr10	+	112696631	112696757	True	NR_026715,NM_007373	chr10,chr10	-,+	RPL13AP6,SHOC2	306,-17381
chr12:21328406-21330071	chr12	+	21328557	21330038	True	NM_021094,NM_006446	chr12,chr12	-,+	SLCO1A2,SLCO1B1	157851,-44486
chr1:1266655-1266883	chr1	+	1266687	1266931	True	NM_152228,NM_017871,NM_001029885	chr1,chr1,chr1	+,-,+	TAS1R3,CPSF3L,GLTPD1	-12,-6641,-6595
chr2:220301347-220302547	chr2	+	220301660	220302594	True	NM_012100,NM_005876	chr2,chr2	-,+	DNPEP,SPEG	-48998,-2018
chr9:101703870-101705286	chr9	+	101704000	101705331	True	NM_173551,NM_001855	chr9,chr9	-,+	ANKS6,COL15A1	-145206,806
chr1:155098963-155099248	chr1	+	155098979	155099125	True	NM_004428,NM_018973,NM_018845,NM_001122839,NM_001122837,NM_182685	chr1,chr1,chr1,chr1,chr1,chr1	+,-,+,+,+,+	EFNA1,DPM3,SLC50A1,SLC50A1,SLC50A1,EFNA1	1223,13808,9162,9162,9162,1223
chr11:36515981-36517163	chr11	+	36515989	36517172	True	NM_000448,NM_004620	chr11,chr11	+,-	RAG1,TRAF6	72390,14701
chr2:107503949-107504747	chr2	+	107504006	107504725	True	NM_001142352,NM_032528,NM_001142351,NR_003506	chr2,chr2,chr2,chr2	-,-,-,+	ST6GAL2,ST6GAL2,ST6GAL2,PLGLA	-443,-443,-1396,-501288
chr4:109087628-109087879	chr4	+	109087647	109087923	True	NM_001130714,NM_001130713,NM_001166119,NM_016269,NR_029374,NR_029373	chr4,chr4,chr4,chr4,chr4,chr4	-,-,-,-,+,+	LEF1,LEF1,LEF1,LEF1,LOC641518,LOC641518	2239,2239,80,2239,757,5352
chr11:117667398-117667623	chr11	+	117667455	117667579	True	NM_020693,NM_001558	chr11,chr11	-,+	DSCAML1,IL10RA	447,189526
chr1:24826951-24828395	chr1	+	24826976	24828365	True	NM_001199012,NM_013441	chr1,chr1	-,+	C1orf201,RCAN3	-85389,1021
chr7:5014366-5014610	chr7	+	5014400	5014543	True	NM_198403,NR_023384,NR_023385,NR_015449	chr7,chr7,chr7,chr7	-,+,+,+	MMD2,RNF216L,RNF216L,RNF216L	-15556,-835,-835,-835
chr20:444557-446349	chr20	+	445073	445997	True	NM_144628,NM_031229	chr20,chr20	-,+	TBC1D20,RBCK1	-1886,-56423
chr22:51193795-51194981	chr22	+	51193796	51194931	True	NM_001003789,NR_026981	chr22,chr22	-,+	RABL2B,RPL23AP82	27206,582
chr22:51193795-51194981	chr2	-	114415481	114415533	False	NR_024531,NM_013412	chr2,chr2	-,+	RPL23AP7,RABL2A	-30766,-30715
chr22:51193795-51194981	chr15	+	101835334	101835386	False	NM_024652,NM_003090	chr15,chr15	+,-	LRRK1,SNRPA1	-375925,124
chr8:144295134-144295657	chr8	+	144295403	144295689	True	NM_178172,NM_001130478	chr8,chr8	+,-	GPIHBP1,LY6H	-386,-53350
chrX:68723472-68723801	chrX	+	68723474	68723826	True	NM_145119,NM_015686	chrX,chrX	-,+	PJA1,FAM155B	-338109,1251
chr1:169596091-169597427	chr1	+	169596372	169597479	True	NM_003005,NM_018186	chr1,chr1	-,+	SELP,C1orf112	1951,167070
chr1:181000613-181001339	chr1	+	181000674	181001388	True	NM_005819,NM_001531,NM_001195000,NM_001195035,NM_001194999	chr1,chr1,chr1,chr1,chr1	-,+,+,+,+	STX6,MR1,MR1,MR1,MR1	-8628,1172,1172,1172,1172
chr13:36700034-36700404	chr13	+	36700046	36700250	True	NM_001111046,NM_004734	chr13,chr13	+,-	CCNA1,DCLK1	305716,5314
chr2:96876675-96878341	chr2	+	96876895	96878389	True	NM_020151,NM_001037228	chr2,chr2	-,+	STARD7,LOC285033	-2322,27587
chr17:43212116-43212423	chr17	+	43212185	43212257	True	NM_024722,NM_001135704,NM_001135707,NM_001135706,NM_001135705,NM_133373	chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,-	ACBD4,ACBD4,ACBD4,ACBD4,ACBD4,PLCD3	756,-2279,756,756,756,-2294
chr2:23652412-23653628	chr2	+	23652874	23653644	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	496340,-44627
chr5:775126-776571	chr5	+	775523	776499	True	NM_001166260,NM_024786	chr5,chr5	+,-	TRIP13,ZDHHC11	116469,74652
chr1:144932243-144932453	chr1	+	144932243	144932367	True	NM_004892,NM_001002811	chr1,chr1	+,-	SEC22B,PDE4DIP	164039,-211
chr12:102428858-102429621	chr12	+	102429032	102429656	True	NM_017915,NM_016053	chr12,chr12	+,-	C12orf48,CCDC53	84299,26297
chr12:66697380-66697623	chr12	+	66697450	66697658	True	NM_016056,NM_033647	chr12,chr12	-,+	TMBIM4,HELB	-133643,-1152
chr3:108476538-108477707	chr3	+	108476537	108477460	True	NM_016388,NM_032579	chr3,chr3	+,-	TRAT1,RETNLB	64170,-407
chr1:45474777-45475906	chr1	+	45474797	45475783	True	NM_024602,NR_036510,NM_000374	chr1,chr1,chr1	-,+,+	HECTD3,UROD,UROD	1294,2021,2021
chr14:77492900-77493137	chr14	+	77492906	77493148	True	NM_024496,NM_033426	chr14,chr14	-,+	IRF2BPL,KIAA1737	1936,71429
chr7:2720618-2720948	chr7	+	2720633	2720865	True	NM_133463,NM_152743	chr7,chr7	+,-	AMZ1,BRAT1	-1521,-125241
chr22:46645585-46645813	chr22	+	46645750	46645812	True	NM_207327,NM_017931	chr22,chr22	-,+	C22orf40,TTC38	431,18048
chr14:91317472-91318529	chr14	+	91317782	91318410	True	NM_001010854,NM_001102366	chr14,chr14	-,+	TTC7B,C14orf159	-35021,261946
chr1:33166808-33167980	chr1	+	33166925	33167971	True	NM_030786,NM_001161708,NM_020888	chr1,chr1,chr1	-,-,+	SYNC,SYNC,KIAA1522	440,440,39540
chr9:139964979-139965184	chr9	+	139965029	139965125	True	NM_207309,NM_178448	chr9,chr9	+,-	UAP1L1,C9orf140	6827,-1
chr12:54448003-54448685	chr12	+	54448077	54448706	True	NM_153633,NR_026655,NR_026658	chr12,chr12,chr12	+,+,-	HOXC4,FLJ12825,LOC100240735	-467,3331,26951
chr16:85058130-85058844	chr16	+	85058194	85058602	True	NM_017740,NM_014732	chr16,chr16	-,+	ZDHHC7,KIAA0513	-13053,2807
chr4:2626743-2627037	chr4	+	2626839	2627030	True	NM_003704,NM_001161527	chr4,chr4	+,-	FAM193A,TNIP2	128,130772
chr9:122130815-122131228	chr9	+	122130815	122131089	True	NR_027442,NM_014618	chr9,chr9	+,-	LOC100288842,DBC1	1424685,700
chr8:133491000-133491584	chr8	+	133491005	133491550	True	NM_004519,NM_198513	chr8,chr8	-,+	KCNQ3,PHF20L1	1505,296053
chr19:5980054-5980957	chr19	+	5980379	5980863	True	NM_080590,NM_007322,NM_003624,NM_007320	chr19,chr19,chr19,chr19	+,-,-,-	CAPS,RANBP3,RANBP3,RANBP3	-66252,-2059,-2059,-2059
chr9:90499121-90499659	chr9	+	90499216	90499646	True	NM_001039803,NM_178828	chr9,chr9	-,+	CDK20,C9orf79	90099,-1495
chr19:50668881-50669169	chr19	+	50668899	50669205	True	NM_001145809,NM_152358	chr19,chr19	+,-	MYH14,IZUMO2	37679,-2361
chr17:3792619-3793084	chr17	+	3792628	3792968	True	NM_172207,NM_172206,NM_032294,NM_031965	chr17,chr17,chr17,chr17	-,-,-,+	CAMKK1,CAMKK1,CAMKK1,GSG2	3419,1119,3419,-165482
chr7:66204361-66205001	chr7	+	66204673	66204915	True	NR_003934,NM_014504	chr7,chr7	-,+	LOC729156,RABGEF1	104956,727
chr4:74864382-74864707	chr4	+	74864389	74864733	True	NM_001511,NM_002994	chr4,chr4	+,-	CXCL1,CXCL5	-129331,27
chrX:103229954-103230237	chrX	+	103229964	103230280	True	NR_003238,NM_001002916	chrX,chrX	+,-	H2BFXP,H2BFWT	221,38026
chrX:103229954-103230237	chrX	-	103317723	103318039	False	NR_003238,NM_001164416	chrX,chrX	-,+	H2BFXP,H2BFM	-221,-23258
chr22:23972097-23973326	chr22	+	23972472	23973138	True	NM_153615,NM_016449	chr22,chr22	+,-	RGL4,C22orf43	59909,1420
chr1:230802813-230804197	chr1	+	230802826	230804106	True	NM_007357,NM_000029	chr1,chr1	+,-	COG2,AGT	-24675,46280
chr17:73777336-73777828	chr17	+	73777495	73777666	True	NM_005324,NM_001080419	chr17,chr17	-,+	H3F3B,UNK	-1635,3014
chr19:55676755-55677717	chr19	+	55676778	55677702	True	NM_178837,NM_000363,NM_017729	chr19,chr19,chr19	-,-,+	C19orf51,TNNI3,EPS8L1	366,-7678,-85069
chr4:6274525-6275006	chr4	+	6274534	6275038	True	NM_006005,NM_144720,NM_001145853	chr4,chr4,chr4	+,-,+	WFS1,JAKMIP1,WFS1	-3008,-72216,-3008
chr17:10558406-10559260	chr17	+	10558543	10558880	True	NM_002470,NM_020233	chr17,chr17	-,+	MYH3,C17orf48	635,42046
chr3:128228506-128228719	chr3	+	128228564	128228726	True	NR_026954,NM_032638	chr3,chr3	+,-	LOC90246,GATA2	-1937,-16534
chr1:110883310-110883898	chr1	+	110883343	110883773	True	NM_001201545,NR_036595,NM_022768	chr1,chr1,chr1	+,-,+	RBM15,LOC440600,RBM15	-1450,-1550,-1450
chr16:75019554-75020012	chr16	+	75019651	75019849	True	NM_030581,NM_032268	chr16,chr16	-,+	WDR59,ZNRF1	-634,13065
chr7:150069943-150070207	chr7	+	150069953	150070047	True	NM_002889,NM_173680,NM_013400,NM_014374,NM_001099695,NM_001099696	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,+,+	RARRES2,ZNF775,REPIN1,REPIN1,REPIN1,REPIN1	-31190,6358,-4125,-1746,-4125,-4125
chr19:4008485-4009112	chr19	+	4008532	4009088	True	NM_015897,NM_001961	chr19,chr19	+,-	PIAS4,EEF2	-834,-23071
chr18:24436228-24437381	chr18	+	24436261	24437210	True	NM_004028,NR_026908,NM_001650	chr18,chr18,chr18	-,+,-	AQP4,C18orf16,AQP4	5415,8061,8556
chr12:120313903-120314731	chr12	+	120313924	120314758	True	NM_207311,NM_007174	chr12,chr12	+,-	CCDC64,CIT	112889,384
chr2:96875988-96876473	chr2	+	96876071	96876421	True	NM_020151,NM_001037228	chr2,chr2	-,+	STARD7,LOC285033	-1498,29555
chr2:231903110-231904075	chr2	+	231903175	231904099	True	NR_033879,NM_001144994	chr2,chr2	-,+	LOC348761,C2orf72	-42428,-945
chr16:3248814-3250461	chr16	+	3249588	3250284	True	NM_012360,NM_001145447	chr16,chr16	+,-	OR1F1,ZNF200	3962,34955
chr13:49106936-49107174	chr13	+	49106936	49107200	True	NM_001268,NM_020377	chr13,chr13	-,+	RCBTB2,CYSLTR2	166,173750
chr10:44060622-44061117	chr10	+	44060822	44061030	True	NM_005674,NM_001099283,NM_001099282,NM_145312,NM_001099284	chr10,chr10,chr10,chr10,chr10	-,-,-,+,-	ZNF239,ZNF239,ZNF239,ZNF485,ZNF239	2933,9092,9091,40824,9092
chrX:134972031-134972496	chrX	+	134972168	134972486	True	NM_001017438,NM_018666	chrX,chrX	-,+	CT45A6,SAGE1	-924,3298
chr17:37558392-37558612	chr17	+	37558415	37558505	True	NM_001184906,NM_015083,NM_032875	chr17,chr17,chr17	-,+,-	FBXL20,CDK12,FBXL20	-506,59233,-506
chr7:74267290-74267522	chr7	+	74267329	74267451	True	NM_173537,NR_027775	chr7,chr7	-,+	GTF2IRD2,PMS2P5	440,39442
chr12:104456922-104457291	chr12	+	104456948	104457176	True	NM_031302,NM_013320	chr12,chr12	-,+	GLT8D2,HCFC2	-13033,1059
chr3:113234508-113236271	chr3	+	113234885	113235917	True	NM_144718,NM_017699	chr3,chr3	-,+	SPICE1,SIDT1	-851,15300
chr7:105513522-105514493	chr7	+	105513712	105514236	True	NM_020725,NM_152750,NM_152749	chr7,chr7,chr7	-,+,-	ATXN7L1,CDHR3,ATXN7L1	2845,89420,2845
chr9:112974402-112975056	chr9	+	112974656	112975050	True	NM_001136562,NM_001012993	chr9,chr9	+,-	AKAP2,C9orf152	-86926,-4243
chr3:149194812-149196229	chr3	+	149194921	149195873	True	NM_004617,NM_014220	chr3,chr3	+,-	TM4SF4,TM4SF1	-2612,-99353
chr4:10456650-10458047	chr4	+	10456750	10457917	True	NM_000798,NM_053042	chr4,chr4	+,-	DRD5,ZNF518B	-673544,1168
chr12:6798262-6798533	chr12	+	6798378	6798570	True	NM_001039917,NM_001039916,NM_001039920,NM_001135734,NM_001039919,NM_001039918,NM_133476,NM_001164094	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,-,-,-,-,-,-,+	ZNF384,ZNF384,ZNF384,ZNF384,ZNF384,ZNF384,ZNF384,COPS7A	149,-553,149,156,149,7,7,34579
chr1:10269131-10269843	chr1	+	10269378	10269861	True	NM_015074,NM_004401,NM_183416	chr1,chr1,chr1	+,-,+	KIF1B,DFFA,KIF1B	902,262803,902
chr11:101915768-101917280	chr11	+	101916249	101917236	True	NM_178127,NM_032930,NM_001195005	chr11,chr11,chr11	-,+,+	ANGPTL5,C11orf70,C11orf70	-128996,932,932
chr7:66042512-66044020	chr7	+	66042527	66043859	True	NM_001167961,NR_002933	chr7,chr7	+,-	KCTD7,LOC493754	50008,-103
chr12:112280695-112280923	chr12	+	112280817	112280966	True	NR_015404,NM_139078,NM_003668	chr12,chr12,chr12	-,+,+	C12orf47,MAPKAPK5,MAPKAPK5	-111,-589,-589
chr11:85397014-85398693	chr11	+	85397149	85398371	True	NM_152723,NM_032273	chr11,chr11	-,+	CCDC89,TMEM126A	-47,-38237
chr15:52863015-52863660	chr15	+	52863185	52863463	True	NM_006628,NM_002748	chr15,chr15	-,+	ARPP19,MAPK6	-1972,-551825
chr19:21353769-21354614	chr19	+	21353811	21354343	True	NM_133473,NM_021269	chr19,chr19	+,-	ZNF431,ZNF708	-29029,157934
chr1:16944588-16945463	chr1	+	16944733	16945357	True	NR_027504,NM_017940	chr1,chr1	+,-	MST1P2,NBPF1	26711,-4751
chr9:117092294-117092853	chr9	+	117092719	117092795	True	NM_000607,NM_000608,NM_030767	chr9,chr9,chr9	+,+,-	ORM1,ORM2,AKNA	-7467,-701,63940
chr9:117092294-117092853	chr9	+	117085948	117086024	False	NM_000607,NM_000608,NM_030767	chr9,chr9,chr9	+,+,-	ORM1,ORM2,AKNA	-696,6044,70711
chr8:26433515-26434371	chr8	+	26433523	26434241	True	NM_001386,NM_007257	chr8,chr8	+,-	DPYSL2,PNMA2	1179,-62040
chr15:51055815-51056864	chr15	+	51056121	51056797	True	NM_032802,NM_007347	chr15,chr15	-,+	SPPL2A,AP4E1	1171,144148
chr11:12133004-12133216	chr11	+	12133093	12133265	True	NM_013253,NM_014632	chr11,chr11	-,+	DKK3,MICAL2	-102176,-1006
chr22:17517637-17517867	chr22	+	17517638	17517858	True	NM_001037814,NR_015352	chr22,chr22	-,+	GAB4,CECR7	-28526,-229
chr22:17517637-17517867	chr21	+	11169245	11169309	False	NM_001187,NR_037458	chr21,chr21	-,+	BAGE,MIR3687	-70308,-1343093
chr2:204571860-204572512	chr2	+	204571958	204572552	True	NM_006139,NM_203365	chr2,chr2	+,-	CD28,RAPH1	-818,-171900
chr3:195942296-195942923	chr3	+	195942543	195942878	True	NM_001039617,NM_152672	chr3,chr3	-,+	ZDHHC19,OSTalpha	-4243,504
chr18:43684772-43685266	chr18	+	43684815	43685051	True	NR_026978,NM_138443,NM_004046,NM_001001937	chr18,chr18,chr18,chr18	+,+,-,-	HAUS1,HAUS1,ATP5A1,ATP5A1	-578,-578,-6528,-616
chr6:164727243-164728593	chr6	+	164727407	164728534	True	NM_206855,NR_037593	chr6,chr6	+,-	QKI,LOC100526820	-891786,-892425
chr9:126776279-126777282	chr9	+	126776396	126777218	True	NM_004789,NM_024820	chr9,chr9	+,-	LHX2,DENND1A	-2558,-83979
chr16:840091-841231	chr16	+	840431	841183	True	NM_001025190,NM_022092,NM_016541,NM_058192	chr16,chr16,chr16,chr16	-,+,-,-	MSLNL,CHTF18,GNG13,RPUSD1	-7505,-1860,9600,-2048
chr21:42790522-42791428	chr21	+	42790602	42791421	True	NM_002462,NM_001135099,NM_001178046,NM_001144925	chr21,chr21,chr21,chr21	+,-,+,+	MX1,TMPRSS2,MX1,MX1	6556,88621,6681,1098
chr17:202501-203027	chr17	+	202587	203063	True	NM_001190412,NM_001190413,NM_001190411,NM_001013672,NM_006987	chr17,chr17,chr17,chr17,chr17	-,-,-,+,-	RPH3AL,RPH3AL,RPH3AL,C17orf97,RPH3AL	46,46,46,57054,46
chr16:84151233-84151609	chr16	+	84151275	84151404	True	NM_003791,NM_178452	chr16,chr16	-,+	MBTPS1,LRRC50	-758,27460
chr5:56123545-56125168	chr5	+	56123793	56124993	True	NM_152622,NM_005921	chr5,chr5	-,+	MIER3,MAP3K1	123021,-12952
chr7:148133241-148134301	chr7	+	148133332	148134340	True	NM_145304,NM_001203249	chr7,chr7	+,-	C7orf33,EZH2	153316,446311
chr2:133172411-133173455	chr2	+	133172504	133173418	True	NM_001508,NR_027020	chr2,chr2	+,-	GPR39,ANKRD30BL	728,-156962
chr1:160380269-160380716	chr1	+	160380349	160380738	True	NM_004371,NM_020335	chr1,chr1	-,+	COPA,VANGL2	-66995,-10036
chr5:122758241-122758708	chr5	+	122758246	122758691	True	NM_001031812,NM_153223,NM_001166226	chr5,chr5,chr5	+,-,-	CSNK1G3,CEP120,CEP120	89101,645,645
chr13:21520357-21520561	chr13	+	21520507	21520589	True	NM_022459,NM_005870	chr13,chr13	-,+	XPO4,SAP18	-43594,194063
chr19:4246945-4247211	chr19	+	4246984	4247184	True	NM_001169126,NM_018074	chr19,chr19	-,+	TMIGD2,CCDC94	55294,12
chr22:21736482-21737885	chr22	+	21736498	21737894	True	NM_001128635,NR_003700,NM_001128633	chr22,chr22,chr22	+,-,+	RIMBP3B,PI4KAP2,RIMBP3C	145,133936,-46
chr22:21736482-21737885	chr22	-	21905704	21906924	False	NM_001128635,NM_003347,NM_001128633	chr22,chr22,chr22	-,+,-	RIMBP3B,UBE2L3,RIMBP3C	-331,15032,46
chr22:21736482-21737885	chr22	-	20461740	20462963	False	NM_015672,NR_026919	chr22,chr22	-,+	RIMBP3,LOC150197	46,-267936
chrX:140271055-140271336	chrX	+	140271097	140271269	True	NM_145664,NM_012317	chrX,chrX	+,-	SPANXB2,LDOC1	-174387,91
chr6:154404222-154404797	chr6	+	154404241	154404809	True	NM_001130699,NM_001145287	chr6,chr6	-,+	IPCEF1,OPRM1	246456,2832
chr2:118845701-118845920	chr2	+	118845760	118845912	True	NM_019044,NM_016133	chr2,chr2	-,+	CCDC93,INSIG2	-74021,137
chr3:49840975-49841397	chr3	+	49841001	49841287	True	NM_001007540,NM_203370	chr3,chr3	-,+	CDHR4,C3orf54	-3747,-365
chr1:27527968-27529274	chr1	+	27528087	27529206	True	NM_015023,NM_003047	chr1,chr1	+,-	WDTC1,SLC9A1	31800,-46636
chr7:44836927-44838035	chr7	+	44836942	44837805	True	NM_138635,NM_021130	chr7,chr7	-,+	H2AFV,PPIA	49971,-752
chr17:66287038-66287390	chr17	+	66287039	66287127	True	NM_004694,NM_001174166,NM_014960	chr17,chr17,chr17	-,-,+	SLC16A6,SLC16A6,ARSG	328,328,-31767
chr8:8236555-8237034	chr8	+	8236708	8237018	True	NR_024361,NM_001080826	chr8,chr8	+,-	FLJ10661,SGK223	-150667,2289
chrX:149862908-149864412	chrX	+	149862967	149864395	True	NM_001184808,NM_003828	chrX,chrX	-,+	CD99L2,MTMR1	202944,-1149
chr2:97484113-97484403	chr2	+	97484295	97484429	True	NM_017623,NM_144994,NM_199078	chr2,chr2,chr2	+,-,+	CNNM3,ANKRD23,CNNM3	-2358,25379,-2358
chr12:110270324-110270629	chr12	+	110270504	110270564	True	NM_021625,NM_001143852	chr12,chr12	-,+	TRPV4,TCHP	698,67514
chr2:128293098-128293316	chr2	+	128293205	128293341	True	NM_017969,NM_001080527	chr2,chr2	-,+	IWS1,MYO7B	-9118,36
chr5:140794188-140794504	chr5	+	140794194	140794346	True	NM_032091,NM_032090,NM_032101,NM_032092,NM_005642,NM_018927,NM_018926,NM_032100,NM_018914,NM_018913	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,-,+,+,+,+,+	PCDHGA11,PCDHGA10,PCDHGB7,PCDHGA11,TAF7,PCDHGB7,PCDHGB6,PCDHGB6,PCDHGA11,PCDHGA10	6190,-1502,2867,6190,-93843,2913,-6475,-6475,6190,-1502
chr5:137475011-137475715	chr5	+	137475046	137475742	True	NM_003551,NM_005733	chr5,chr5	-,+	NME5,KIF20A	86,38674
chr11:118243032-118244310	chr11	+	118243143	118244330	True	NM_004788,NM_001040651	chr11,chr11	+,-	UBE4A,CD3D	-12906,-29684
chr17:62102968-62103765	chr17	+	62103008	62103654	True	NM_001099788,NM_001099789,NM_001099786,NM_001099787,NM_001191031	chr17,chr17,chr17,chr17,chr17	-,-,-,-,+	ICAM2,ICAM2,ICAM2,ICAM2,C17orf72	-5014,-5014,-5014,-5014,-27348
chr15:41623673-41624368	chr15	+	41623854	41624234	True	NM_007280,NM_018454,NM_001129897,NM_016359	chr15,chr15,chr15,chr15	-,+,+,+	OIP5,NUSAP1,NUSAP1,NUSAP1	635,691,691,691
chr7:56119492-56119694	chr7	+	56119496	56119566	True	NM_001762,NM_004577,NR_002957,NM_001009186	chr7,chr7,chr7,chr7	+,-,+,+	CCT6A,PSPH,SNORA15,CCT6A	-169,-228,8596,-169
chr1:48456009-48457935	chr1	+	48456050	48457715	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	4904,230641
chr12:117804488-117804939	chr12	+	117804559	117804967	True	NM_000620,NM_001204218,NM_153348	chr12,chr12,chr12	-,-,+	NOS1,NOS1,FBXW8	-4952,-4952,-455849
chr4:129729949-129730680	chr4	+	129730019	129730608	True	NM_199320,NM_024900,NM_144643	chr4,chr4,chr4	+,+,-	PHF17,PHF17,SCLT1	170,170,284207
chr4:120060039-120060411	chr4	+	120060090	120060448	True	NM_016599,NM_001001701	chr4,chr4	+,-	MYOZ2,C4orf3	-3211,161570
chr8:95562629-95563037	chr8	+	95562807	95562929	True	NM_183009,NM_015496,NM_001034915	chr8,chr8,chr8	-,-,+	KIAA1429,KIAA1429,ESRP1	2873,2873,90434
chr9:46294653-46296033	chr9	+	46294790	46295475	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2664060,392090
chr9:46294653-46296033	chr9	-	45087734	45088419	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-97552,-1457004
chr9:46294653-46296033	chr9	-	46208799	46209484	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2578069,478081
chr10:27803310-27803850	chr10	+	27803314	27803614	True	NM_021252,NM_001034842	chr10,chr10	+,-	RAB18,PTCHD3	-10127,-100017
chr12:53194035-53194945	chr12	+	53194065	53194918	True	NM_199187,NM_057088	chr12,chr12	+,-	KRT18,KRT3	147736,-4173
chr4:16216091-16216768	chr4	+	16216099	16216602	True	NM_153365,NR_027696	chr4,chr4	-,+	TAPT1,FLJ39653	11610,11683
chr22:44397052-44399022	chr22	+	44397166	44399038	True	NM_001003828,NM_138814	chr22,chr22	+,-	PARVB,PNPLA5	-2055,-109273
chr8:95487773-95488185	chr8	+	95487773	95488097	True	NM_001205262,NM_012415,NM_001034915	chr8,chr8,chr8	-,-,+	RAD54B,RAD54B,ESRP1	-430,-430,165266
chr6:109189059-109189713	chr6	+	109189177	109189768	True	NM_001199934,NM_032131	chr6,chr6	-,+	SESN1,ARMC2	140481,-19613
chr15:42386021-42386271	chr15	+	42386034	42386270	True	NM_198141,NM_178034	chr15,chr15	+,-	GANC,PLA2G4D	180095,532
chr16:30366827-30367155	chr16	+	30366830	30367192	True	NR_024465,NM_013292,NM_006110	chr16,chr16,chr16	-,+,-	CD2BP2,MYLPF,CD2BP2	-575,18930,-148
chr1:114693141-114694854	chr1	+	114693222	114694781	True	NM_205848,NM_020190	chr1,chr1	-,+	SYT6,OLFML3	1741,-171243
chr19:9325147-9325740	chr19	+	9325149	9325679	True	NM_001005191,NM_175883	chr19,chr19	-,+	OR7D4,OR7D2	8,-28930
chr6:134499456-134499713	chr6	+	134499487	134499657	True	NM_004865,NM_001143678,NM_005627,NM_001143677	chr6,chr6,chr6,chr6	+,-,-,-	TBPL1,SGK1,SGK1,SGK1	-225237,-2417,-3453,-477
chr17:43718772-43719544	chr17_ctg5_hap1	-	1147747	1148409	False	NR_026901,NR_026906,NR_026905	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	+,-,-	LOC644172,C17orf69,C17orf69	40029,2613,2613
chr17:43718772-43719544	chr17	+	43718903	43719565	True	NR_026901,NR_026906,NR_026905	chr17,chr17,chr17	-,+,+	LOC644172,C17orf69,C17orf69	-39155,-2613,-2613
chr6:33715725-33716766	chr6	+	33715774	33716727	True	NM_001142883,NM_054111,NM_002224	chr6,chr6,chr6	-,-,+	IP6K3,IP6K3,ITPR3	-1012,-1012,-126669
chr19:12914136-12915012	chr19	+	12914137	12915055	True	NM_005809,NM_181738,NM_006397	chr19,chr19,chr19	-,-,+	PRDX2,PRDX2,RNASEH2A	-1443,-1443,2372
chr3:184081546-184082108	chr3	+	184081569	184082022	True	NM_004366,NM_001171088,NM_001171087,NM_006232,NM_001171089	chr3,chr3,chr3,chr3,chr3	-,-,-,+,-	CLCN2,CLCN2,CLCN2,POLR2H,CLCN2	-2178,-2178,-2178,-426,-2178
chr3:10332133-10332864	chr3	+	10332141	10332583	True	NM_001134941,NM_001134946,NM_001134944,NM_001134945,NR_026829,NR_024138,NR_004431,NR_024146,NM_016362,NR_024145,NR_024144,NR_024132,NR_024133,NR_024134,NR_024135,NR_024136,NR_024137	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,+,-,+,+,-,+,+,-,-,-,-,-,-	GHRL,GHRL,GHRL,GHRL,C3orf42,GHRL,GHRLOS,GHRLOS,GHRL,GHRLOS,GHRLOS,GHRL,GHRL,GHRL,GHRL,GHRL,GHRL	-6,2098,2098,2098,-6089,2098,-4754,-4754,-6,-4754,-4754,2098,2098,2098,2098,2098,2098
chr12:112037508-112037866	chr12	+	112037588	112037764	True	NM_001136538,NM_002973	chr12,chr12	+,-	ACAD10,ATXN2	86092,-108
chr12:121088088-121088406	chr12	+	121088163	121088343	True	NM_031205,NM_001033677,NM_198202,NM_004276	chr12,chr12,chr12,chr12	+,+,-,+	CABP1,CABP1,POP5,CABP1	27,-9793,-68962,27
chr19:11592824-11593100	chr19	+	11592867	11593025	True	NM_032281,NM_001420,NM_002743	chr19,chr19,chr19	-,-,+	ELAVL3,ELAVL3,PRKCSH	-1064,-1064,-46649
chr14:74416355-74416633	chr14	+	74416420	74416536	True	NM_182480,NM_152445,NM_182476	chr14,chr14,chr14	+,-,+	COQ6,FAM161B,COQ6	106,349,419
chr3:49067098-49068055	chr3	+	49067110	49068072	True	NM_199074,NM_199073,NR_029948,NM_199070,NM_000884,NR_029690,NM_018114,NM_199069	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,-,+,-,-,-,+	NDUFAF3,NDUFAF3,MIR425,NDUFAF3,IMPDH2,MIR191,DALRD3,NDUFAF3	-9260,-8550,-9443,-8094,-235,-8968,-8643,-8094
chr1:226111386-226111641	chr1	+	226111444	226111638	True	NM_000120,NM_013328	chr1,chr1	+,-	EPHX1,PYCR2	-98493,377
chr7:126892514-126892832	chr7	+	126892558	126892831	True	NR_028041,NM_000845,NM_001127323,NM_001662	chr7,chr7,chr7,chr7	-,-,-,+	GRM8,GRM8,GRM8,ARF5	-8989,-8989,-130,335574
chr17:26691948-26692363	chr17	+	26692001	26692343	True	NM_015584,NM_001080837,NM_000638,NM_152464,NM_015077	chr17,chr17,chr17,chr17,chr17	-,-,-,+,+	POLDIP2,SEBOX,VTN,TMEM199,SARM1	-7398,-18,5080,-7365,6643
chr2:233897015-233897705	chr2	+	233897070	233897718	True	NM_005383,NM_019850	chr2,chr2	+,-	NEU2,NGEF	-69,-19119
chr9:69388941-69389736	chr9	+	69389232	69389784	True	NM_001085457,NM_001098805	chr9,chr9	-,+	CBWD6,ANKRD20A4	-126639,-7302
chr9:69388941-69389736	chr9	+	67934016	67934942	False	NR_027422,NM_001012419,NM_032250	chr9,chr9,chr9	-,+,+	FAM27B,ANKRD20A3,ANKRD20A1	-139827,-7306,-7306
chr9:69388941-69389736	chr9	+	42375581	42375882	False	NR_003670,NM_001012419,NM_001012421	chr9,chr9,chr9	-,+,+	KGFLP2,ANKRD20A3,ANKRD20A2	-355997,-7329,-7329
chr9:69388941-69389736	chr9	-	43125961	43126262	False	NM_001012419,NR_026558,NM_001012421	chr9,chr9,chr9	-,+,-	ANKRD20A3,AQP7P3,ANKRD20A2	7332,-267867,7332
chr11:12024913-12025513	chr11	+	12024935	12025534	True	NM_013253,NM_014632,NM_015881,NM_001018057	chr11,chr11,chr11,chr11	-,+,-,-	DKK3,MICAL2,DKK3,DKK3	5433,106603,5145,4702
chr16:1274498-1274752	chr16	+	1274581	1274659	True	NM_012467,NM_024164,NM_003294	chr16,chr16,chr16	-,-,+	TPSG1,TPSB2,TPSAB1	645,5576,16018
chr7:97738384-97738775	chr7	+	97738460	97738774	True	NM_006188,NM_014916	chr7,chr7	-,+	OCM2,LMTK2	-119044,-2318
chrX:24176390-24176774	chrX	+	24176574	24176693	True	NM_030624,NM_003410,NM_001178086,NM_001178095,NM_001178085,NM_001178084	chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,+	KLHL15,ZFX,ZFX,ZFX,ZFX,ZFX	-131271,-8781,-8873,-8873,-8789,-8794
chr1:14743087-14744212	chr1	+	14743783	14744218	True	NM_015209,NR_027136	chr1,chr1	+,-	KAZN,C1orf126	180994,734793
chr14:75326723-75327790	chr14	+	75326730	75327662	True	NM_001933,NM_001080408	chr14,chr14	+,-	DLST,PROX2	20931,2931
chr4:83320443-83321155	chr4	+	83320554	83321128	True	NM_031370,NM_021204	chr4,chr4	-,+	HNRNPD,ENOPH1	-25405,30597
chr1:187133010-187133844	chr1	+	187133136	187133844	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-483577,-335162
chr10:26928003-26929375	chr10	+	26928050	26929302	True	NR_026794,NM_001012750	chr10,chr10	+,-	LOC731789,ABI1	2734,220764
chr7:50014919-50016272	chr7	+	50014924	50016294	True	NM_001159878,NM_001161834	chr7,chr7	-,+	ZPBP,C7orf72	116625,119387
chr2:16847286-16847829	chr2	+	16847466	16847868	True	NM_005378,NM_030797	chr2,chr2	+,-	MYCN,FAM49A	-766836,-332
chr1:109585067-109585616	chr1	+	109585078	109585488	True	NM_001142550,NM_001142551,NM_014969,NM_020141	chr1,chr1,chr1,chr1	-,-,-,+	WDR47,WDR47,WDR47,TMEM167B	-228,-228,-228,47914
chr19:49497467-49498962	chr19	+	49497531	49498755	True	NR_027763,NM_006666,NM_002103,NM_001161587	chr19,chr19,chr19,chr19	-,+,-,-	GYS1,RUVBL2,GYS1,GYS1	-921,-426,-921,-921
chr10:81681112-81682003	chr10	+	81681147	81681755	True	NR_002724,NM_003019	chr10,chr10	+,-	MBL1P,SFTPD	-1264,27156
chr4:88420945-88422373	chr4	+	88420948	88421948	True	NM_198038,NM_001128310	chr4,chr4	+,-	NUDT9,SPARCL1	-77266,28757
chr22:45899901-45900366	chr22	+	45899955	45900067	True	NM_001996,NM_006485,NM_006487,NM_006486,NM_148674	chr22,chr22,chr22,chr22,chr22	+,+,+,+,-	FBLN1,FBLN1,FBLN1,FBLN1,SMC1B	-1287,-1287,-1287,-1287,-90455
chr12:51479069-51479701	chr12	+	51479068	51479643	True	NM_030809,NM_015416	chr12,chr12	-,+	CSRNP2,LETMD1	-1735,-37037
chr19:6393216-6393710	chr19	+	6393276	6393436	True	NM_002096,NM_032306	chr19,chr19	-,+	GTF2F1,ALKBH7	15,-20883
chr12:6546479-6546924	chr12	+	6546788	6546880	True	NM_001242,NR_015382	chr12,chr12	+,-	CD27,LOC678655	7170,13853
chr3:126276280-126276917	chr3	+	126276283	126276803	True	NM_152533,NM_152889	chr3,chr3	-,+	C3orf22,CHST13	1005,-33158
chr7:101929551-101929766	chr7	+	101929574	101929764	True	NR_036245,NM_020979,NM_001146210	chr7,chr7,chr7	+,+,-	MIR4285,SH2B2,SPDYE6	6604,-1220,67175
chr7:96655214-96655499	chr7	+	96655240	96655540	True	NM_005221,NM_005222	chr7,chr7	-,+	DLX5,DLX6	-1097,-20001
chr21:45232420-45233000	chr21	+	45232486	45232782	True	NR_026961,NM_003683	chr21,chr21	-,+	LOC284837,RRP1	-38,-23119
chr18:9333546-9333941	chr18	+	9333861	9333935	True	NM_020648,NM_001042388	chr18,chr18	+,-	TWSG1,PPP4R1	829,280715
chr17:76125245-76126261	chr17	+	76125292	76126251	True	NM_152468,NM_001127198,NM_007267	chr17,chr17,chr17	+,-,-	TMC8,TMC6,TMC6	607,-431,2288
chr7:114079397-114079690	chr7	+	114079447	114079727	True	NM_002711,NM_148899	chr7,chr7	-,+	PPP1R3A,FOXP2	-520365,-12953
chr12:49960205-49960489	chr12	+	49960209	49960537	True	NM_006337,NM_012284,NM_001012300	chr12,chr12,chr12	-,+,-	MCRS1,KCNH3,MCRS1	1424,-27320,13
chr7:53753057-53753680	chr7	+	53753250	53753712	True	NM_182595,NR_004422	chr7,chr7	+,-	POM121L12,HPVC1	-649960,516452
chr14:92039794-92040734	chr14	+	92039885	92040783	True	NR_003709,NM_001080113	chr14,chr14	+,-	SNORA11B,C14orf184	-447178,650
chr3:48492310-48493654	chr3	+	48492913	48493639	True	NM_130384,NM_024661,NM_032166	chr3,chr3,chr3	+,-,+	ATRIP,CCDC51,ATRIP	-4753,-11384,-4753
chr17:73762751-73764239	chr17	+	73763257	73763331	True	NM_000154,NM_001080419	chr17,chr17	-,+	GALK1,UNK	-1977,17349
chr1:165597748-165599040	chr1	+	165597900	165599007	True	NM_004528,NR_026744	chr1,chr1	+,-	MGST3,LOC400794	1442,-46559
chr5:53606859-53607271	chr5	+	53606868	53607327	True	NM_006308,NM_019087	chr5,chr5	+,-	HSPB3,ARL15	144103,-465
chr1:209848740-209849307	chr1	+	209848739	209849347	True	NM_015714,NM_000228	chr1,chr1	+,-	G0S2,LAMB3	-120,-22919
chr3:87042050-87042936	chr3	+	87042230	87042963	True	NM_016206,NM_014043	chr3,chr3	-,+	VGLL3,CHMP2B	-1973,233449
chr2:208031460-208031729	chr2	+	208031524	208031754	True	NM_003709,NM_173077	chr2,chr2	-,+	KLF7,CPO	-910,-227297
chr4:90033516-90034417	chr4	+	90033522	90034450	True	NM_014883,NM_145715	chr4,chr4	-,+	FAM13A,TIGD2	-55199,-44
chr19:10213022-10214029	chr19	+	10213098	10213936	True	NM_002566,NM_031917,NM_001198690,NR_003688,NR_004381,NM_001040664,NM_020230	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+,+	P2RY11,ANGPTL6,PPAN-P2RY11,SNORD105B,SNORD105,PPAN-P2RY11,PPAN	8260,-1,2962,6488,4390,2962,2962
chr5:54617280-54617729	chr5	+	54617279	54617785	True	NM_019030,NM_015360	chr5,chr5	-,+	DHX29,SKIV2L2	-13758,-13759
chr1:14075319-14075595	chr1	+	14075347	14075542	True	NM_001007257,NM_001010847	chr1,chr1	+,-	PRDM2,LRRC38	333,-235105
chr9:130924214-130924580	chr9	+	130924343	130924571	True	NM_024112,NM_001131016	chr9,chr9	+,-	C9orf16,CIZ1	-1855,29347
chr3:123602655-123602917	chr3	+	123602696	123602768	True	NM_053025,NM_053027,NM_053026,NR_028136,NM_053028	chr3,chr3,chr3,chr3,chr3	-,-,-,+,-	MYLK,MYLK,MYLK,KALRN,MYLK	431,431,431,210789,431
chr3:141944888-141945742	chr3	+	141944934	141945724	True	NM_001679,NM_001039547,NR_033289	chr3,chr3,chr3	+,-,-	ATP1B3,GK5,GK5	-349515,-485,-485
chr20:15186146-15187421	chr20	+	15186228	15187251	True	NR_037841,NM_001033087	chr20,chr20	-,+	NCRNA00186,MACROD2	-276067,-8783
chr12:50419264-50419473	chr12	+	50419299	50419520	True	NM_001126103,NM_001126104,NM_001095,NM_013277	chr12,chr12,chr12,chr12	-,-,+,-	RACGAP1,RACGAP1,ACCN2,RACGAP1	8,8,31966,8
chr19:37957251-37957758	chr19	+	37957549	37957763	True	NM_144694,NM_152484	chr19,chr19	+,-	ZNF570,ZNF569	2218,626
chr5:780227-780717	chr5	+	780262	780704	True	NM_001166260,NM_024786	chr5,chr5	+,-	TRIP13,ZDHHC11	112264,70447
chr5:780227-780717	chr5	+	688269	688375	False	NM_018140,NM_007030	chr5,chr5	+,-	CEP72,TPPP	-75915,5185
chrX:17394308-17394542	chrX	+	17394331	17394585	True	NR_033348,NM_198270	chrX,chrX	-,+	RAI2,NHS	484412,-839
chr1:23495803-23497099	chr1	+	23495886	23496684	True	NM_033631,NM_001142546,NR_036057	chr1,chr1,chr1	-,-,+	LUZP1,LUZP1,MIR3115	-535,-535,-125152
chr3:50317744-50318115	chr3	+	50317864	50317952	True	NM_006764,NM_153215	chr3,chr3	-,+	IFRD2,C3orf45	12124,-1397
chr17:18623450-18624197	chr17	+	18623622	18624214	True	NM_001145045,NM_001037330	chr17,chr17	-,+	ZNF286B,TRIM16L	-38050,1187
chr17:18623450-18624197	chr17	-	15547923	15548055	False	NM_006382,NM_001130842	chr17,chr17	-,+	CDRT1,ZNF286A	-24905,54835
chr1:33337376-33338046	chr1	+	33337392	33337807	True	NM_001171941,NM_001171940,NM_153756,NM_002143	chr1,chr1,chr1,chr1	-,-,-,+	FNDC5,FNDC5,FNDC5,HPCA	325,-978,-978,14290
chr16:2929389-2930653	chr16	+	2929631	2930474	True	NM_001142499,NM_138439,NM_022119,NM_001142500	chr16,chr16,chr16,chr16	+,+,-,+	FLYWCH2,FLYWCH2,PRSS22,FLYWCH2	2721,2721,-21460,2721
chr3:151097641-151098239	chr3	+	151097651	151098027	True	NM_022788,NR_031678	chr3,chr3	-,+	P2RY12,MIR548H2	4573,249292
chr17:80407064-80407588	chr17	+	80407113	80407629	True	NM_012336,NM_001193655,NM_001193654,NM_001193657,NM_031968,NM_001193653,NM_001083608,NM_001033046,NM_001100408,NR_036514,NR_036517,NR_036516,NR_036519,NR_036518,NM_001038618,NM_001100407	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,-,+,-,+,-,-,-,-,-,-,-,+,-	NARF,C17orf62,C17orf62,C17orf62,NARF,C17orf62,NARF,C17orf62,C17orf62,C17orf62,C17orf62,C17orf62,C17orf62,C17orf62,NARF,C17orf62	8910,23,1128,1128,8910,1128,8910,1128,1128,1128,1128,1128,1128,1128,8430,1128
chr17:2320075-2320516	chr17	+	2320074	2320334	True	NM_001098509,NR_028335	chr17,chr17	+,-	SGSM2,LOC284009	-79324,-1344
chr11:47270428-47271505	chr11	+	47270591	47271338	True	NM_001130102,NM_001610,NM_001130101,NM_005693,NM_001131064	chr11,chr11,chr11,chr11,chr11	+,-,+,+,-	NR1H3,ACP2,NR1H3,NR1H3,ACP2	-193,-134,8158,8158,-134
chr11:66036752-66037770	chr11	+	66036818	66037708	True	NM_030981,NM_020470,NM_182553	chr11,chr11,chr11	+,-,+	RAB1B,YIF1A,CNIH2	-814,18986,7987
chr3:187421108-187422857	chr3	+	187421193	187422909	True	NR_034062,NM_001004312	chr3,chr3	+,-	LOC100131635,RTP2	-1096,-848
chr12:128900015-128900702	chr12	+	128900118	128900667	True	NM_145648,NR_037406	chr12,chr12	-,+	SLC15A4,MIR3612	407925,-121532
chr4:82383065-82384649	chr4	+	82383079	82384618	True	NM_152545,NM_001201	chr4,chr4	-,+	RASGEF1B,BMP3	8508,-431011
chr12:31080063-31080296	chr12	+	31080088	31080238	True	NM_032156,NM_001080509	chr12,chr12	-,+	CAPRIN2,TSPAN11	-172640,-301
chr8:13320661-13321258	chr8	+	13320661	13321305	True	NM_001007090,NM_182643	chr8,chr8	+,-	C8orf48,DLC1	103046,51174
chr12:107015054-107016907	chr12	+	107015125	107016390	True	NM_001033050,NM_002920	chr12,chr12	-,+	MTERFD3,RFX4	364590,-20233
chr19:56151141-56151635	chr19	+	56151329	56151655	True	NM_016535,NM_016202,NM_013301,NM_001163423,NM_203374,NM_207115	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,-,+	ZNF581,ZNF580,CCDC106,ZNF580,ZNF784,ZNF580	3330,1762,7298,1807,-15388,736
chr22:45563310-45564760	chr22	+	45563537	45564597	True	NM_007172,NR_031651,NM_153645	chr22,chr22,chr22	+,-,+	NUP50,MIR1249,NUP50	-3863,32353,-3037
chr2:99951471-99952487	chr2	+	99951710	99952438	True	NM_015904,NM_005783	chr2,chr2	+,-	EIF5B,TXNDC9	1395,472
chr5:31532185-31532387	chr5	+	31532271	31532341	True	NM_018356,NM_013235,NM_001100412	chr5,chr5,chr5	+,-,-	C5orf22,DROSHA,DROSHA	31,1,1
chr2:211478644-211479594	chr2	+	211478646	211478994	True	NM_001136575,NR_002763	chr2,chr2	-,+	LANCL1,CPS1-IT1	-137147,3300
chr3:183744504-183744892	chr3	+	183744540	183744934	True	NM_182537,NM_001023587,NM_001145143,NM_005688,NM_001163646	chr3,chr3,chr3,chr3,chr3	+,-,+,-,+	HTR3D,ABCC5,HTR3D,ABCC5,HTR3D	4397,-8813,4595,-8813,5684
chr11:64072392-64072777	chr11	+	64072391	64072669	True	NM_004451,NM_001039496,NM_016404	chr11,chr11,chr11	+,+,-	ESRRA,C11orf20,TRMT112	374,-4579,12414
chr19:17933784-17935230	chr19	+	17933906	17935225	True	NM_014256,NM_005543	chr19,chr19	+,-	B3GNT3,INSL3	-28038,-1586
chr11:46638056-46638639	chr11	+	46638081	46638659	True	NR_024589,NR_024588,NM_001205119,NR_024587,NM_014741,NM_173811,NM_001205121,NM_001205120,NM_001205122,NM_001142673	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,-,+,+,+,+	ATG13,ATG13,ATG13,ATG13,ATG13,HARBI1,ATG13,ATG13,ATG13,ATG13	166,166,166,166,166,168,166,166,166,166
chr4:190201359-190202894	chr4	+	190201441	190202887	True	NR_036692,NM_020040	chr4,chr4	+,-	HSP90AA4P,TUBB4Q	191411,703187
chr19:55012670-55013658	chr19	+	55013049	55013563	True	NM_145057,NM_021270,NM_002288	chr19,chr19,chr19	-,+,+	CDC42EP5,LAIR2,LAIR2	-28627,449,449
chr19:55012670-55013658	chr19	-	54877563	54877818	False	NM_002287,NM_021706,NM_001005367	chr19,chr19,chr19	-,-,+	LAIR1,LAIR1,TTYH1	-842,-842,48786
chr13:111588932-111589926	chr13	+	111588932	111589868	True	NM_017664,NM_001113511	chr13,chr13	-,+	ANKRD10,ARHGEF7	-21516,177755
chr10:124907716-124907927	chr10	+	124907812	124907912	True	NM_001007793,NM_004725,NM_022466,NM_005519	chr10,chr10,chr10,chr10	+,+,-,+	BUB3,BUB3,IKZF5,HMX2	5847,5847,-139501,-225
chr4:8201144-8201513	chr4	+	8201182	8201506	True	NM_001130088,NM_018986	chr4,chr4	-,+	ABLIM2,SH3TC1	-40623,-174
chr3:58423222-58424936	chr3	+	58423295	58424800	True	NR_033384,NM_001173468,NM_000925,NM_001128214	chr3,chr3,chr3,chr3	-,-,-,+	PDHB,PDHB,PDHB,KCTD6	-3729,-3716,-3716,53022
chr2:147345255-147346788	chr2	+	147345339	147346821	True	NM_001190882,NR_026904	chr2,chr2	-,+	ORC4,PABPC1P2	1431535,-765
chr14:67707453-67707772	chr14	+	67707476	67707741	True	NM_022474,NM_015994	chr14,chr14	+,-	MPP5,ATP6V1D	279,119030
chr8:37405102-37405798	chr8	+	37405299	37405698	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	147602,199917
chr2:61107013-61108233	chr2	+	61107257	61108055	True	NM_002908,NR_033980	chr2,chr2	+,-	REL,FLJ16341	696,448
chr20:1253254-1253741	chr20	+	1253256	1253628	True	NM_014723,NM_015685	chr20,chr20	+,-	SNPH,SDCBP2	-6347,40739
chr2:237476041-237476384	chr2	+	237476054	237476204	True	NM_020311,NM_024726	chr2,chr2	+,-	CXCR7,IQCA1	2175,-59962
chr4:107955810-107956751	chr4	+	107955821	107956596	True	NM_014421,NM_001142416	chr4,chr4	-,+	DKK2,AIMP1	907,-718209
chr16:2077883-2078262	chr16	+	2077892	2078234	True	NM_001130012,NM_178167,NM_001099456,NM_004785	chr16,chr16,chr16,chr16	+,-,+,+	SLC9A3R2,ZNF598,NPW,SLC9A3R2	-1055,-18129,-8422,-1055
chr4:9652022-9652915	chr4	+	9652234	9652709	True	NR_031688,NM_000798	chr4,chr4	-,+	MIR548I2,DRD5	-94297,130548
chr4:9652022-9652915	chr4	-	3995485	3995543	False	NM_000683,NR_024253	chr4,chr4	+,-	ADRA2C,LOC348926	-227240,-38337
chr1:32740503-32741222	chr1	+	32740581	32741163	True	NM_001042771,NR_026850	chr1,chr1	+,-	LCK,MTMR9LP	-920,-33270
chr18:19179221-19179711	chr18	+	19179328	19179760	True	NM_006938,NM_052911	chr18,chr18	+,-	SNRPD1,ESCO1	12499,983
chr20:42543702-42544418	chr20	+	42543789	42544351	True	NM_176791,NM_032883,NM_001098796,NM_001098797	chr20,chr20,chr20,chr20	-,+,+,+	GTSF1L,TOX2,TOX2,TOX2	-188147,430,430,-348
chr15:42693959-42695167	chr15	+	42693974	42695206	True	NM_022473,NM_173090,NM_173088,NM_173089	chr15,chr15,chr15,chr15	-,+,+,+	ZFP106,CAPN3,CAPN3,CAPN3	54574,1770,9,1770
chr9:34654926-34655658	chr9	+	34655103	34655669	True	NM_147162,NM_001142784,NM_000155,NM_004512,NM_006664	chr9,chr9,chr9,chr9,chr9	+,+,+,+,-	IL11RA,IL11RA,GALT,IL11RA,CCL27	-1223,-2973,-8520,-1223,7070
chr1:177936341-177937998	chr1	+	177936389	177937731	True	NM_170692,NM_033127	chr1,chr1	+,-	RASAL2,SEC16B	125132,1377
chr2:34274824-34276042	chr2	+	34274943	34275869	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-536052,-321659
chr7:141268530-141269188	chr7	+	141268687	141268955	True	NM_018238,NM_001080392	chr7,chr7	+,-	AGK,KIAA1147	-17660,133054
chr6:86301585-86302427	chr6	+	86301770	86302433	True	NM_153816,NM_002526,NM_020468	chr6,chr6,chr6	-,+,-	SNX14,NT5E,SNX14	1246,-142528,1246
chr18:7574189-7574884	chr18	+	7574189	7574671	True	NM_005559,NM_002845,NM_001105244	chr18,chr18,chr18	-,+,+	LAMA1,PTPRM,PTPRM	-456376,-6926,-6926
chr19:55461519-55462834	chr19	+	55461553	55461669	True	NM_206828,NM_139176,NM_001174081,NM_001127255	chr19,chr19,chr19,chr19	-,-,+,-	NLRP7,NLRP7,NLRP2,NLRP7	-2680,-2680,14982,-2680
chr11:8563992-8564551	chr11	+	8564050	8564604	True	NM_000990,NM_030906	chr11,chr11	+,-	RPL27A,STK33	139390,50953
chr8:144678289-144678617	chr8	+	144678345	144678663	True	NM_001130053,NM_032378,NM_001130055,NM_001130056,NM_001130057,NM_032862,NM_001960,NM_001195203	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,-,+,-,-	EEF1D,EEF1D,EEF1D,EEF1D,EEF1D,TIGD5,EEF1D,EEF1D	1232,1232,1232,1232,945,1410,1232,1232
chr3:38304036-38305007	chr3	+	38304074	38305051	True	NM_004256,NR_024024	chr3,chr3	+,-	SLC22A13,ACAA1	2246,-125341
chrX:154521308-154521915	chrX	+	154521323	154521660	True	NM_003372,NM_171998	chrX,chrX	+,-	VBP1,RAB39B	-76673,-27471
chr17:77727211-77729124	chr17	+	77727292	77728492	True	NM_178543,NM_020649,NM_032647	chr17,chr17,chr17	+,-,+	ENPP7,CBX8,CBX2	-22467,42479,23484
chr20:5100204-5100549	chr20	+	5100241	5100595	True	NM_001009923,NM_182649,NM_001009925,NM_001009924,NR_028370,NM_002592,NM_014145,NM_003818	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	-,-,-,-,+,-,-,+	C20orf30,PCNA,C20orf30,C20orf30,PCNA-AS1,PCNA,C20orf30,CDS2	-6508,102,-6508,-6508,-60,6723,-6508,6886
chr16:58228364-58229521	chr16	+	58228501	58229550	True	NM_001142302,NM_001896	chr16,chr16	+,-	CCDC113,CSNK2A2	54289,2283
chr19:47247799-47248120	chr19	+	47247937	47248163	True	NM_013403,NM_001039877,NM_001039885,NM_024301	chr19,chr19,chr19,chr19	-,-,+,+	STRN4,STRN4,FKRP,FKRP	1607,1607,1139,1139
chr2:139529145-139530160	chr2	+	139529256	139530210	True	NM_007226,NR_033658	chr2,chr2	-,+	NXPH2,LOC647012	7653,124683
chr7:75446911-75447919	chr7	+	75447432	75447546	True	NM_002991,NM_001040456	chr7,chr7	-,+	CCL24,RHBDD2	-4399,60770
chr14:24731309-24732046	chr14	+	24731522	24731994	True	NM_000359,NM_004581,NM_016576,NM_182836	chr14,chr14,chr14,chr14	-,-,+,-	TGM1,RABGGTA,GMPR2,RABGGTA	472,8799,-29470,8859
chr4:119199390-119199637	chr4	+	119199621	119199683	True	NR_003584,NR_034011,NR_002963,NR_034010,NM_003619	chr4,chr4,chr4,chr4,chr4	+,+,+,+,-	SNHG8,SNHG8,SNORA24,SNHG8,PRSS12	233,233,661,233,74289
chr3:15544214-15544678	chr3	+	15544271	15544629	True	NM_033083,NM_080538,NR_036232	chr3,chr3,chr3	+,-,-	EAF1,COLQ,MIR4270	-75258,-3892,-6456
chr19:57761893-57762907	chr19	+	57761944	57762789	True	NM_001023563,NM_001012729,NM_001145078	chr19,chr19,chr19	+,-,+	ZNF805,DUXA,ZNF805	-9949,-83088,-9949
chr12:56523282-56523856	chr12	+	56523317	56523665	True	NM_015292,NM_001130420,NM_001184796	chr12,chr12,chr12	+,-,+	ESYT1,SMARCC2,ESYT1	-1382,59736,-1382
chr4:9445355-9446521	chr11	+	71588717	71588768	True	NR_029192,NM_001002035	chr11,chr11	-,+	LOC100133315,DEFB108B	50776,-44523
chr16:90114066-90114809	chr16	+	90114789	90114853	True	NR_027336,NR_027335,NR_023348	chr16,chr16,chr16	-,-,+	LOC100130015,LOC100130015,GAS8	-598,-756,-25832
chr21:38361972-38362172	chr21	+	38362010	38362070	True	NM_000411,NM_018962	chr21,chr21	-,+	HLCS,DSCR6	516,16792
chr16:89896660-89897408	chr16	+	89896775	89897318	True	NM_032451,NM_001018112	chr16,chr16	+,-	SPIRE2,FANCA	-1921,-13710
chr2:29130692-29132095	chr2	+	29130889	29131926	True	NM_017910,NR_003074	chr2,chr2	-,+	TRMT61B,SNORD92	-37714,4601
chr11:64902728-64903399	chr11	+	64902777	64903260	True	NM_032431,NM_172230,NR_037568	chr11,chr11,chr11	-,-,+	SYVN1,SYVN1,MRPL49	-774,-774,-13112
chr6:158954776-158955632	chr6	+	158954974	158955446	True	NM_006519,NM_020823	chr6,chr6	-,+	DYNLT1,TMEM181	110408,2021
chr4:186297217-186297741	chr4	+	186297310	186297372	True	NM_181726,NM_018409	chr4,chr4	+,-	ANKRD37,LRP2BP	20467,2830
chr15:25474741-25475370	chr15	+	25474844	25475412	True	NR_003353,NR_003352,NR_003358,NR_003496,NR_003497,NR_003351,NR_003344,NR_003345,NR_003346,NR_003347,NM_130838,NR_003303,NR_003348,NR_003349,NR_003350	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,+,-,+,+,+,+	SNORD115-38,SNORD115-37,SNORD115-43,HBII-52-27,HBII-52-28,SNORD115-36,SNORD115-29,SNORD115-30,SNORD115-31,SNORD115-32,UBE3A,SNORD115-11,SNORD115-33,SNORD115-34,SNORD115-35	9572,7720,5819,-9245,-7394,5819,5819,-4545,-2639,-781,175291,5819,572,2121,3981
chr1:23038278-23038667	chr1	+	23038445	23038667	True	NR_036214,NM_017449,NM_004442	chr1,chr1,chr1	-,+,+	MIR4253,EPHB2,EPHB2	151102,-1165,-1165
chr8:21910428-21910853	chr8	+	21910564	21910754	True	NM_001978,NM_024815,NM_001114135,NM_001114137,NM_001114136,NM_001114139,NM_001114138	chr8,chr8,chr8,chr8,chr8,chr8,chr8	+,-,+,+,+,+,+	EPB49,NUDT18,EPB49,EPB49,EPB49,EPB49,EPB49	5931,56228,4621,326,1573,1573,5931
chr5:140625111-140625337	chr5	+	140625161	140625383	True	NM_018935,NR_001282,NM_031947	chr5,chr5,chr5	+,+,-	PCDHB15,PCDHB19P,SLC25A2	-65,-5523,58279
chr21:32933861-32934623	chr21	+	32934101	32934577	True	NM_000454,NM_003253	chr21,chr21	+,-	SOD1,TIAM1	97357,-2811
chr5:173114709-173115259	chr5	+	173114772	173115294	True	NR_027109,NM_138369	chr5,chr5	+,-	LOC285593,BOD1	-108170,-71106
chr19:43174129-43174566	chr19	+	43174133	43174561	True	NR_036584,NM_021016	chr19,chr19	+,-	LOC100289650,PSG3	151453,70157
chr17:15243802-15244848	chr17	+	15243981	15244765	True	NM_031898,NR_033371	chr17,chr17	-,+	TEKT3,CDRT7	243,-309745
chr2:228339849-228341708	chr2	+	228339963	228341484	True	NM_024795,NM_001135187,NM_001135189,NM_001135188,NM_004504	chr2,chr2,chr2,chr2,chr2	-,+,+,+,+	TM4SF20,AGFG1,AGFG1,AGFG1,AGFG1	-95941,-3128,-3128,-3128,-3128
chr16:4613863-4614374	chr16	+	4613866	4614327	True	NM_001145011,NM_013399	chr16,chr16	+,-	LOC342346,C16orf5	-7433,-25050
chr11:102190685-102192207	chr11	+	102191496	102192078	True	NM_001165,NM_052932,NM_182962	chr11,chr11,chr11	+,-,+	BIRC3,TMEM123,BIRC3	-3365,131756,-3365
chr5:81281246-81281672	chr5	+	81281307	81281582	True	NM_031482,NM_012446	chr5,chr5	+,-	ATG10,SSBP2	-13520,-234235
chr6:24405405-24406049	chr6	+	24405454	24405991	True	NM_001195610,NM_020662	chr6,chr6	-,+	DCDC2,MRS2	-21934,-2360
chr8:39787602-39788069	chr8	+	39787776	39788086	True	NM_194294,NM_001464	chr8,chr8	+,-	IDO2,ADAM2	4387,-91997
chr16:50584550-50585412	chr16	+	50584699	50585361	True	NM_001144972,NM_033119	chr16,chr16	-,+	SNX20,NKD1	129953,-2511
chr3:121838051-121839569	chr3	+	121838086	121839382	True	NM_006889,NM_001199799	chr3,chr3	+,-	CD86,ILDR1	-41387,-96959
chr12:57121209-57122321	chr12	+	57121341	57122370	True	NM_001113202,NM_001113203,NM_005594,NM_001113201,NM_003725	chr12,chr12,chr12,chr12,chr12	-,-,-,-,+	NACA,NACA,NACA,NACA,HSD17B6	-2015,-2015,-2275,-2275,34737
chr13:72439976-72440180	chr13	+	72440047	72440229	True	NM_004392,NM_080760,NM_024808,NM_080759	chr13,chr13,chr13,chr13	-,-,+,-	DACH1,DACH1,C13orf34,DACH1	1151,1151,861812,1151
chr14:77429507-77430091	chr14	+	77429598	77430090	True	NM_024496,NM_033426	chr14,chr14	-,+	IRF2BPL,KIAA1737	64994,134487
chr2:233472006-233472799	chr2	+	233472319	233472771	True	NM_145702,NR_027663	chr2,chr2	-,+	TIGD1,EFHD1	-57093,-1603
chr19:18631393-18632039	chr19	+	18631557	18632060	True	NM_001171948,NM_006532	chr19,chr19	+,-	C19orf50,ELL	36511,927
chr1:85665821-85666126	chr1	+	85665868	85666008	True	NM_145172,NM_032184	chr1,chr1	+,-	WDR63,SYDE2	-137926,770
chr14:63531453-63533078	chr14	+	63531671	63532702	True	NM_172375,NM_020663	chr14,chr14	-,+	KCNH5,RHOJ	-19716,138442
chr11:57282312-57282704	chr11	+	57282321	57282689	True	NM_003627,NM_001198810,NM_001105565	chr11,chr11,chr11	-,-,+	SLC43A1,SLC43A1,SMTNL1	553,-1,27424
chr9:133883742-133884079	chr9	+	133883878	133884065	True	NM_001145106,NM_006059	chr9,chr9	-,+	FIBCD1,LAMC3	-69423,438
chr16:3931478-3931694	chr16	+	3931614	3931736	True	NM_005223,NM_004380,NM_001079846	chr16,chr16,chr16	+,-,-	DNASE1,CREBBP,CREBBP	-228725,-1493,-1493
chr22:30964045-30964917	chr22	+	30964112	30964710	True	NM_004861,NM_000355	chr22,chr22	-,+	GAL3ST1,TCN2	-3236,38359
chr13:111271475-111272069	chr13	+	111271475	111272047	True	NM_017817,NM_018210	chr13,chr13	-,+	RAB20,CARKD	-57404,-3525
chr22:41460562-41460816	chr22	+	41460630	41460704	True	NM_138481,NR_031694	chr22,chr22	-,+	CHADL,MIR1281	176281,27812
chr1:190448124-190449772	chr1	+	190448186	190449728	True	NM_199051,NR_033922	chr1,chr1	-,+	FAM5C,LOC440704	-1427,144291
chr17:34953819-34954121	chr17	+	34953855	34954165	True	NM_024864,NM_001033580,NM_024308	chr17,chr17,chr17	+,-,+	MRM1,MYO19,DHRS11	3859,-62550,-5680
chr12:76451227-76452498	chr12	+	76451309	76452066	True	NM_007350,NM_006851	chr12,chr12	-,+	PHLDA1,GLIPR1	-25753,-576847
chr12:76946900-76947679	chr12	+	76946929	76947172	True	NM_020841,NM_001003712,NM_015336	chr12,chr12,chr12	-,-,+	OSBPL8,OSBPL8,ZDHHC17	6468,6468,210681
chr8:86093724-86095206	chr8	+	86093869	86095173	True	NM_001099670,NM_001951,NM_001083588,NM_001083589	chr8,chr8,chr8,chr8	-,+,+,+	C8orf59,E2F5,E2F5,E2F5	37520,-4308,-4308,4736
chr6:170151966-170152175	chr6	+	170152084	170152170	True	NM_018341,NM_174910	chr6,chr6	+,-	C6orf70,TCTE3	-414,-446
chr8:101963029-101963435	chr8	+	101963162	101963382	True	NM_145690,NM_001135702,NM_001135701,NM_001135700,NM_003406,NM_001135699,NR_033962	chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,-,-,+	YWHAZ,YWHAZ,YWHAZ,YWHAZ,YWHAZ,YWHAZ,FLJ42969	1025,-363,228,228,2291,1889,100899
chr16:67680337-67680912	chr16	+	67680531	67680849	True	NM_001013838,NM_001082486	chr16,chr16	+,-	RLTPR,ACD	-1552,13919
chr1:95536590-95538174	chr1	+	95536639	95537883	True	NM_001199679,NM_144988	chr1,chr1	+,-	TMEM56,ALG14	20189,674
chr19:18497256-18497557	chr19	+	18497320	18497484	True	NM_145256,NM_004864,NR_036156	chr19,chr19,chr19	-,+,+	LRRC25,GDF15,MIR3189	10981,-404,0
chr7:115670042-115670669	chr7	+	115670123	115670718	True	NM_001018058,NM_015641,NM_012252	chr7,chr7,chr7	-,+,-	TFEC,TES,TFEC	132,179828,132
chr1:46571416-46572726	chr1	+	46571546	46572452	True	NM_003629,NM_005727	chr1,chr1	-,+	PIK3R3,TSPAN1	25990,68296
chr14:65014266-65014475	chr14	+	65014367	65014484	True	NM_006977,NM_021979,NM_172365	chr14,chr14,chr14	-,+,+	ZBTB25,HSPA2,C14orf50	-43813,-7237,2135
chr2:239049676-239049945	chr2	+	239049689	239049983	True	NM_198582,NM_030768	chr2,chr2	+,-	KLHL30,ILKAP	-2377,62391
chr8:102217800-102218122	chr8	+	102217864	102218164	True	NM_001042511,NM_001042510,NM_016096,NR_033962	chr8,chr8,chr8,chr8	-,-,-,+	ZNF706,ZNF706,ZNF706,FLJ42969	7,-24,-24,-153633
chr21:31310918-31311303	chr21	+	31310927	31311253	True	NM_175611,NR_027021,NM_000830	chr21,chr21,chr21	-,+,-	GRIK1,GRIK1-AS1,GRIK1	1079,-190484,1079
chr9:132565259-132565511	chr9	+	132565286	132565510	True	NM_000113,NM_014506	chr9,chr9	-,+	TOR1A,TOR1B	20981,-79
chr2:231578970-231580463	chr2	+	231579037	231580310	True	NM_001130850,NM_005683,NM_001130849,NM_016289	chr2,chr2,chr2,chr2	+,-,+,+	CAB39,GPR55,CAB39,CAB39	-832,209681,-832,-1538
chr19:38037839-38039393	chr19	+	38037953	38039184	True	NM_016536,NM_152606	chr19,chr19	-,+	ZNF571,ZNF540	46539,3123
chr2:220025415-220025666	chr2	+	220025424	220025712	True	NM_024782,NM_001144889,NM_024293,NM_001144890,NM_144712	chr2,chr2,chr2,chr2,chr2	-,-,+,-,-	NHEJ1,SLC23A3,FAM134A,SLC23A3,SLC23A3	-75,9155,17226,9155,9155
chr12:33592377-33592592	chr12	+	33592412	33592580	True	NM_198992,NM_032834	chr12,chr12	-,+	SYT10,ALG10	224,582635
chr12:122018970-122019995	chr12	+	122019095	122019985	True	NM_032590,NM_032790,NM_001005366	chr12,chr12,chr12	-,+,-	KDM2B,ORAI1,KDM2B	-175,44469,-731
chr7:134706590-134708130	chr7	+	134707603	134708096	True	NM_178563,NM_024033	chr7,chr7	+,-	AGBL3,C7orf49	-36404,147486
chr10:45405298-45406185	chr10	+	45405490	45406121	True	NR_033842,NM_001123376	chr10,chr10	-,+	LOC220980,TMEM72	49073,642
chr2:16081699-16082047	chr2	+	16081704	16082080	True	NR_026766,NM_005378	chr2,chr2	-,+	MYCNOS,MYCN	55,-1072
chr8:146025460-146026613	chr8	+	146025554	146026610	True	NM_000973,NM_033301,NM_213605	chr8,chr8,chr8	-,-,+	RPL8,RPL8,ZNF517	-7749,-7825,-1344
chr17:62657094-62657353	chr17	+	62657136	62657398	True	NM_022739,NM_138363	chr17,chr17	-,+	SMURF2,CCDC45	1038,-154036
chr2:17565728-17566530	chr2	+	17565815	17566287	True	NM_003385,NM_001099218	chr2,chr2	+,-	VSNL1,RAD51AP2	155519,133476
chr7:77329204-77330193	chr7	+	77329442	77330192	True	NM_032936,NM_198467	chr7,chr7	-,+	TMEM60,RSBN1L	97606,-3756
chr21:47601095-47601588	chr21	+	47601103	47601637	True	NR_002776,NM_001142854,NM_032261	chr21,chr21,chr21	+,-,-	MCM3AP-AS1,C21orf56,C21orf56	47520,2786,2786
chr19:40895431-40896979	chr19	+	40895537	40896521	True	NM_012268,NM_144685	chr19,chr19	+,-	PLD3,HIPK4	-41256,-69
chr22:26136282-26136707	chr22	+	26136294	26136756	True	NM_001135772,NM_032608	chr22,chr22	-,+	LRP5L,MYO18B	-358750,1363
chr16:4400591-4401011	chr16	+	4400711	4400919	True	NM_032575,NM_016069	chr16,chr16	+,-	GLIS2,PAM16	-18537,504
chr6:56938634-56939465	chr6	+	56938863	56939463	True	NM_001031623,NM_183227	chr6,chr6	+,-	ZNF451,RAB23	15364,146844
chr21:43097796-43098120	chr21	+	43097978	43098162	True	NR_027272,NR_024367	chr21,chr21	-,+	C21orf129,NCRNA00111	37823,1299
chr2:65589697-65590494	chr2	+	65589701	65590510	True	NM_005722,NM_001128210	chr2,chr2	+,-	ACTR2,SPRED2	-134923,3471
chr19:17572954-17573975	chr19	+	17573550	17573975	True	NM_198580,NM_138454	chr19,chr19	+,-	SLC27A1,NXNL1	7324,-1825
chr7:128785628-128787529	chr7	+	128785646	128787237	True	NM_178562,NR_034053	chr7,chr7	+,-	TSPAN33,TNPO3	-985,-90419
chr6:75982954-75984459	chr6	+	75983083	75984423	True	NM_001143958,NM_001100409	chr6,chr6	-,+	TMEM30A,SENP6	10259,327198
chr18:31801859-31802410	chr18	+	31801985	31802393	True	NM_001198548,NM_001392,NM_001198546,NM_001198547,NM_003787,NR_036752	chr18,chr18,chr18,chr18,chr18,chr18	-,+,-,-,-,-	NOL4,DTNA,NOL4,NOL4,NOL4,NOL4	1172,270860,1172,91,1172,91
chr9:139375196-139375677	chr9	+	139375386	139375582	True	NM_152571,NM_014866	chr9,chr9	+,-	C9orf163,SEC16A	2364,1983
chrX:69353901-69355480	chrX	+	69354075	69355515	True	NM_001002254,NM_001551	chrX,chrX	-,+	AWAT2,IGBP1	-84287,-808
chr17:39676417-39676661	chr17	+	39676424	39676552	True	NM_002276,NM_005801,NM_002275	chr17,chr17,chr17	-,+,-	KRT19,EIF1,KRT15	8139,168574,-1154
chr8:99058116-99058348	chr8	+	99058303	99058379	True	NR_002581,NM_001170806,NM_000989	chr8,chr8,chr8	-,+,-	SNORA72,C8orf47,RPL30	-3858,18370,-485
chr1:117566405-117567021	chr1	+	117566554	117566736	True	NM_001145635,NM_004258	chr1,chr1	-,+	TRIM45,CD101	97725,-22223
chr14:103757932-103759708	chr14	+	103758216	103759522	True	NR_033938,NM_001969	chr14,chr14	-,+	LOC100131366,EIF5	-102851,40970
chrX:133942703-133943286	chrX	+	133942859	133943193	True	NM_001170757,NM_001170781,NM_001170782,NM_001170783,NM_001170779,NM_138819,NM_001170784	chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,+,+	FAM122B,FAM122C,FAM122C,FAM122C,FAM122C,FAM122C,FAM122C	-11597,-1697,-1715,-1697,-1697,-1697,-1715
chr6:15658547-15659623	chr6	+	15658562	15659434	True	NM_183040,NR_036448,NM_004973,NM_032122	chr6,chr6,chr6,chr6	-,-,+,-	DTNBP1,DTNBP1,JARID2,DTNBP1	3915,3915,-412093,3915
chr5:5039494-5039927	chr5	+	5039540	5039726	True	NR_026994,NR_028351	chr5,chr5	+,-	LOC340094,FLJ33360	-5119,1297729
chr9:138800611-138800993	chr9	+	138800635	138801029	True	NM_015447,NM_020822	chr9,chr9	-,+	CAMSAP1,KCNT1	-1630,-206655
chr1:74714002-74715443	chr1	+	74714150	74715471	True	NM_015978,NM_001105659	chr1,chr1	+,-	TNNI3K,LRRIQ3	-13144,-50279
chr7:87909852-87911755	chr7	+	87910046	87911371	True	NM_024636,NM_021723	chr7,chr7	-,+	STEAP4,ADAM22	24894,-346543
chr20:34339209-34340299	chr20	+	34339546	34340305	True	NM_184234,NM_004902,NM_016436	chr20,chr20,chr20	-,-,+	RBM39,RBM39,PHF20	-9353,-9353,19617
chr3:115510623-115510843	chr3	+	115510729	115510791	True	NM_002045,NM_015642	chr3,chr3	+,-	GAP43,ZBTB20	-168629,-644602
chr12:54446251-54446798	chr12	+	54446287	54446631	True	NM_153633,NR_026655,NR_026658	chr12,chr12,chr12	+,+,-	HOXC4,FLJ12825,LOC100240735	1029,5406,29026
chr12:110318584-110320553	chr12	+	110318741	110320322	True	NM_016433,NM_001143852	chr12,chr12	-,+	GLTP,TCHP	-448,17756
chr4:83546527-83546943	chr4	+	83546617	83546939	True	NR_024088,NM_021204,NR_024087	chr4,chr4,chr4	-,+,-	C4orf11,ENOPH1,C4orf11	-4027,-194943,-4027
chr17:17943492-17944529	chr17	+	17943578	17944340	True	NM_024052,NM_145691	chr17,chr17	+,-	C17orf39,ATPAF2	-1018,-1098
chr22:29836720-29837010	chr22	+	29836850	29837056	True	NR_002727,NM_021026	chr22,chr22	-,+	RFPL1S,RFPL1	1112,-2333
chr14:105547300-105548038	chr14	+	105547575	105548022	True	NM_174891,NM_013345	chr14,chr14	+,-	C14orf79,GPR132	-95019,-15821
chr14:20882838-20883742	chr14	+	20883316	20883581	True	NM_007110,NM_001641	chr14,chr14	-,+	TEP1,APEX1	-1737,39708
chr8:63982871-63984077	chr8	+	63982930	63984092	True	NR_027378,NM_000370	chr8,chr8	+,-	LOC643763,TTPA	-92567,14570
chr7:100889924-100890617	chr7	+	100890097	100890304	True	NM_016068,NM_006349,NM_014343,NM_001185080	chr7,chr7,chr7,chr7	-,+,-,-	FIS1,ZNHIT1,CLDN15,CLDN15	-1726,-29170,-8870,-7996
chrX:39957045-39957500	chrX	+	39957078	39957448	True	NM_005765,NM_001123385,NM_017745	chrX,chrX,chrX	+,-,-	ATP6AP2,BCOR,BCOR	482767,-359,-359
chr20:36130544-36131536	chr20	+	36130669	36131357	True	NM_005386,NM_001167823	chr20,chr20	+,-	NNAT,BLCAP	18249,21646
chr11:65488099-65488678	chr11	+	65488136	65488421	True	NM_182709,NM_006388,NM_182710,NM_032193	chr11,chr11,chr11,chr11	+,+,+,-	KAT5,KAT5,KAT5,RNASEH2C	-8698,-8698,-8698,38
chr19:43411232-43411643	chr19	+	43411240	43411648	True	NM_002782,NR_036584	chr19,chr19	-,+	PSG6,LOC100289650	10391,-85276
chr3:164914633-164915013	chr3	+	164914806	164915016	True	NM_001122752,NM_014926	chr3,chr3	+,-	SERPINI1,SLITRK3	2538415,-337
chr12:5419680-5420417	chr12	+	5419756	5420432	True	NM_020373,NM_001102654	chr12,chr12	-,+	ANO2,NTF3	635016,120847
chr19:52197919-52198762	chr19	+	52197929	52198783	True	NM_001523,NR_029843,NR_029693,NR_024330,NR_029482	chr19,chr19,chr19,chr19,chr19	-,+,+,+,+	HAS1,MIR99B,MIR125A,NCRNA00085,MIRLET7E	28488,-2115,-1473,-1387,-1941
chr8:139507911-139508579	chr8	+	139508023	139508539	True	NM_015912,NM_017444	chr8,chr8	-,+	FAM135B,CHRAC1	576,2012861
chr1:113223200-113223617	chr1	+	113223605	113223674	True	NM_001130079,NM_020963,NM_001042679	chr1,chr1,chr1	+,+,-	MOV10,MOV10,RHOC	-6609,-6609,26063
chr4:152203046-152203535	chr4	+	152203144	152203420	True	NM_183375,NM_001128923	chr4,chr4	+,-	PRSS48,SH3D19	-4871,-55484
chr15:65901366-65903049	chr15	+	65901596	65903011	True	NM_030800,NM_001136043,NM_004727	chr15,chr15,chr15	-,-,+	C15orf44,C15orf44,SLC24A1	447,509,11258
chr2:219743858-219744620	chr2	+	219744006	219744602	True	NM_017431,NM_025216	chr2,chr2	-,+	PRKAG3,WNT10A	-47494,652
chr17:46874296-46875072	chr17	+	46874444	46874842	True	NM_005831,NM_173623	chr17,chr17	+,-	CALCOCO2,TTLL6	33529,-2758
chr17:67229532-67231436	chr17	+	67229900	67231467	True	NM_080282,NM_002758	chr17,chr17	-,+	ABCA10,MAP2K6	9542,179370
chr22:27041509-27042627	chr22	+	27041536	27042552	True	NR_003491,NM_001887	chr22,chr22	+,-	MIAT,CRYBB1	10893,-27545
chr7:135351255-135353083	chr7	+	135351539	135353118	True	NM_001130929,NM_012450	chr7,chr7	+,-	PL-5283,SLC13A4	-4381,59865
chr11:76478610-76479545	chr11	+	76478704	76479312	True	NM_015516,NR_024042	chr11,chr11	+,-	TSKU,GUCY2E	14972,-45871
chr4:17991880-17992374	chr4	+	17992028	17992343	True	NM_153686,NM_022346	chr4,chr4	-,+	LCORL,NCAPG	31190,-179562
chr10:94353354-94354907	chr10	+	94353530	94354738	True	NM_004969,NM_004523	chr10,chr10	-,+	IDE,KIF11	-19678,-765
chr16:33139832-33140283	chr16	+	33140039	33140151	True	NR_033866,NM_016212	chr16,chr16	-,+	LOC390705,TP53TG3	158601,64828
chr16:33139832-33140283	chr16	+	32199059	32199171	False	NR_002827,NM_003414	chr16,chr16	-,+	HERC2P4,ZNF267	-35185,-314031
chr16:33139832-33140283	chr16	-	32752898	32753010	False	NM_016212	chr16	-	TP53TG3	-64845
chr1:46689041-46690046	chr1	+	46689262	46690063	True	NM_001013615,NR_024332	chr1,chr1	+,-	C1orf190,POMGNT1	-20308,-3285
chr16:23654250-23654671	chr16	+	23654262	23654448	True	NM_001199011,NM_032486,NR_037573,NM_001199743,NM_024675	chr16,chr16,chr16,chr16,chr16	+,+,+,+,-	DCTN5,DCTN5,DCTN5,DCTN5,PALB2	-1626,-1626,-1626,-1626,-1584
chr7:149414160-149414736	chr7	+	149414187	149414626	True	NM_207336,NM_032534	chr7,chr7	-,+	ZNF467,KRBA1	55720,-2090
chr3:184094459-184095308	chr3	+	184094674	184095276	True	NM_001177598,NM_003741,NM_000460,NM_001177597	chr3,chr3,chr3,chr3	-,+,-,-	THPO,CHRD,THPO,THPO	706,2584,706,706
chr5:156483119-156483549	chr5	+	156483273	156483359	True	NM_001099414,NM_012206,NM_001173393,NM_005546	chr5,chr5,chr5,chr5	-,-,-,+	HAVCR1,HAVCR1,HAVCR1,ITK	2182,2182,2665,124547
chr2:97567204-97568867	chr2	+	97567502	97568766	True	NM_001172667,NM_199078,NM_016490	chr2,chr2,chr2	-,+,-	FAM178B,CNNM3,FAM178B	-6603,-85572,-3632
chr6:161413068-161413296	chr6	+	161413067	161413151	True	NM_006724,NR_024277,NM_005922	chr6,chr6,chr6	+,-,+	MAP3K4,NCRNA00241,MAP3K4	-296,169913,-296
chr8:124551819-124552164	chr8	+	124551894	124552210	True	NM_148177,NM_018024,NM_058229	chr8,chr8,chr8	-,+,-	FBXO32,WDYHV1,FBXO32	-7511,-122983,1286
chr14:96969447-96971195	chr14	+	96969462	96971238	True	NM_018036,NM_032632	chr14,chr14	-,+	ATG2B,PAPOLA	-139784,-793
chr1:220445882-220446192	chr1	+	220445949	220446138	True	NR_001587,NM_018060,NM_012414	chr1,chr1,chr1	-,+,-	AURKAPS1,IARS2,RAB3GAP2	-4892,-178545,-106
chr1:17906587-17907186	chr1	+	17906587	17907171	True	NM_018715,NM_001011722	chr1,chr1	-,+	RCC2,ARHGEF10L	-140367,-10
chr7:145842655-145844164	chr7	+	145842686	145844206	True	NR_031645,NM_014141	chr7,chr7	-,+	MIR548F4,CNTNAP2	1231064,-29284
chr20:48732638-48733400	chr20	+	48732664	48733168	True	NM_021988,NM_001032288,NM_022442,NM_005194,NM_199144	chr20,chr20,chr20,chr20,chr20	-,-,-,+,-	UBE2V1,UBE2V1,UBE2V1,CEBPB,UBE2V1	-170,-2954,-173,74207,-170
chr12:49464963-49465616	chr12	+	49465001	49465516	True	NM_144593,NM_005430	chr12,chr12	-,+	RHEBL1,WNT1	-1226,-92816
chr20:32264295-32264673	chr20	+	32264426	32264722	True	NM_001024675,NM_031231,NM_031232,NM_005225	chr20,chr20,chr20,chr20	+,-,-,-	C20orf134,NECAB3,NECAB3,E2F1	-10173,-2162,-2162,9538
chr2:130936339-130936852	chr2	+	130936413	130936687	True	NM_017951,NM_025029,NM_017751,NR_033232,NR_033231,NR_033230,NM_001171083	chr2,chr2,chr2,chr2,chr2,chr2,chr2	-,+,-,-,-,-,-	SMPD4,MZT2B,SMPD4,SMPD4,SMPD4,SMPD4,SMPD4	2693,2813,2693,2693,2693,3686,2693
chr9:125273136-125273571	chr9	+	125273306	125273470	True	NM_012363,NM_054107,NM_001004452	chr9,chr9,chr9	-,+,+	OR1N1,OR1J2,OR1J4	16154,-276,7949
chr2:179655835-179656497	chr2	+	179655865	179656535	True	NM_019091,NM_003319	chr2,chr2	+,-	PLEKHA3,TTN	-310717,15665
chr2:204194154-204194618	chr2	+	204194153	204194409	True	NM_213589,NM_005759	chr2,chr2	-,+	RAPH1,ABI2	205707,-1201
chr16:23520794-23521452	chr16	+	23520812	23521334	True	NM_019116,NM_015044	chr16,chr16	+,-	UBFD1,GGA2	47527,531
chr7:16400276-16401570	chr7	+	16400837	16401191	True	NM_001195280,NM_001101417	chr7,chr7	+,-	LOC100506049,ISPD	165313,59806
chr3:127301911-127302672	chr3	+	127302406	127302486	True	NM_004526,NM_016372,NM_001136053,NM_001142646	chr3,chr3,chr3,chr3	+,-,-,-	MCM2,TPRA1,TPRA1,TPRA1	14766,-3126,7060,7132
chr8:133106911-133108580	chr8	+	133107066	133108609	True	NM_015137,NM_001145095	chr8,chr8	+,-	EFR3A,HHLA1	-190761,8953
chr2:128158945-128159274	chr2	+	128159120	128159270	True	NM_000312,NM_006609	chr2,chr2	+,-	PROC,MAP3K2	16725,-58350
chr20:57269683-57270484	chr20	+	57269852	57270490	True	NR_029844,NM_024663,NM_001204873,NM_001204872	chr20,chr20,chr20,chr20	-,+,+,+	MIR296,NPEPL1,NPEPL1,NPEPL1	122309,-2041,-5716,-5716
chr9:127952348-127953934	chr9	+	127952447	127953810	True	NM_005833,NM_001123355,NM_002721,NM_001123369,NM_001174153,NM_001174152	chr9,chr9,chr9,chr9,chr9,chr9	+,-,-,-,+,+	RABEPK,PPP6C,PPP6C,PPP6C,RABEPK,RABEPK	9051,-229,-229,-229,9010,9010
chr8:144330801-144331636	chr8	+	144330973	144331539	True	NM_173832,NM_052963	chr8,chr8	+,-	ZFP41,TOP1MT	-1915,85561
chr14:99948035-99948313	chr14	+	99948174	99948358	True	NM_032233,NM_001099402,NM_199123	chr14,chr14,chr14	-,+,-	SETD3,CCNK,SETD3	-948,-486,-948
chr22:42473647-42474434	chr22	+	42473650	42474460	True	NM_033318,NM_001002034,NM_000262	chr22,chr22,chr22	+,+,-	C22orf32,FAM109B,NAGA	1238,-3446,-6804
chr6:154680962-154681373	chr6	+	154681049	154681382	True	NM_015553,NM_001130700,NM_001145287	chr6,chr6,chr6	-,-,+	IPCEF1,IPCEF1,OPRM1	-3149,-3149,-273458
chr1:2124544-2124810	chr1	+	2124570	2124766	True	NM_003036,NR_024445,NM_182533	chr1,chr1,chr1	+,-,-	SKI,LOC100128003,C1orf86	35367,308,1498
chrX:47077300-47077976	chrX	+	47077325	47077962	True	NM_033018,NR_024235,NM_006201,NM_001170460	chrX,chrX,chrX,chrX	+,-,+,+	CDK16,NDUFB11,CDK16,CDK16	-13,-72716,113,4454
chr11:3648071-3648990	chr11	+	3648145	3648775	True	NM_053017,NR_002720	chr11,chr11	-,+	ART5,TRPC2	14760,-482
chr19:3969502-3969738	chr19	+	3969538	3969738	True	NM_170678,NM_001348,NR_030367	chr19,chr19,chr19	+,-,-	ITGB1BP3,DAPK3,MIR637	-36488,138,-8028
chr1:204005885-204007392	chr1	+	204006168	204007082	True	NM_005686,NR_027902	chr1,chr1	+,-	SOX13,C1orf157	35163,3361
chr1:46049697-46049943	chr1	+	46049723	46049915	True	NM_002482,NM_001195193,NM_001114938,NM_152298	chr1,chr1,chr1,chr1	+,+,-,+	NASP,NASP,CCDC17,NASP	-114,-114,39866,-114
chr10:105252718-105252947	chr10	+	105252758	105252966	True	NM_001129742,NM_004210	chr10,chr10	-,+	CALHM3,NEURL	-13761,768
chr6:41029122-41029412	chr6	+	41029122	41029424	True	NM_145063,NM_006789	chr6,chr6	-,+	C6orf130,APOBEC2	10814,-8233
chr7:56228949-56229490	chr7	+	56229016	56229420	True	NM_015411,NM_001145712	chr7,chr7	+,-	SUMF2,LOC389493	-97157,-44926
chr10:82216254-82217237	chr10	+	82216305	82217294	True	NM_001128309,NM_030927,NM_138812	chr10,chr10,chr10	+,+,-	TSPAN14,TSPAN14,DYDC1	-2319,-2319,-99805
chr21:30696292-30697269	chr21	+	30696574	30697200	True	NR_027655,NM_006585	chr21,chr21	+,-	BACH1,CCT8	-19072,-250564
chr12:46667992-46669901	chr12	+	46668403	46669170	True	NM_001077484,NM_030674,NM_152641	chr12,chr12,chr12	-,-,+	SLC38A1,SLC38A1,ARID2	-5195,-5195,-544835
chr9:34376504-34376806	chr9	+	34376547	34376755	True	NM_147168,NM_147169,NM_020702,NM_147173	chr9,chr9,chr9,chr9	-,-,-,+	C9orf24,C9orf24,KIAA1161,NUDT2	4893,4893,189,-47094
chr17:41856710-41857545	chr17	+	41856841	41857496	True	NM_004090,NM_001136483	chr17,chr17	-,+	DUSP3,C17orf105	-473,306
chr1:38159666-38159885	chr1	+	38159817	38159923	True	NM_017850,NM_018101	chr1,chr1	-,+	C1orf109,CDCA8	-3625,-1709
chr17:75879136-75879502	chr17	+	75879142	75879530	True	NM_001142640,NR_028337	chr17,chr17	+,-	TNRC6C,FLJ45079	120787,689
chr15:41955962-41956336	chr15	+	41955987	41956270	True	NM_001080541,NM_015540,NM_001164273	chr15,chr15,chr15	+,-,+	MGA,RPAP1,MGA	-3431,-119523,-3431
chr16:20751640-20752306	chr16	+	20751731	20752304	True	NM_202000,NM_017736	chr16,chr16	+,-	ACSM3,THUMPD1	23007,945
chr12:129309192-129309785	chr12	+	129309195	129309771	True	NM_145648,NM_144669	chr12,chr12	-,+	SLC15A4,GLT1D1	-654,28309
chr5:34702902-34704238	chr5	+	34703351	34704272	True	NR_026591,NM_001145523	chr5,chr5	-,+	RAD1,RAI14	211509,-15748
chr17:76609910-76611622	chr17	+	76610017	76610611	True	NM_173628,NM_024419	chr17,chr17	-,+	DNAH17,PGS1	-36541,-235344
chr3:185215698-185215907	chr3	+	185215698	185215768	True	NM_080652,NM_021627	chr3,chr3	-,+	TMEM41A,SENP2	1127,88262
chr4:174089596-174089797	chr4	+	174089596	174089764	True	NM_017423,NM_001130689	chr4,chr4	+,-	GALNT7,HMGB2	139,165206
chr4:108642166-108642467	chr4	+	108642358	108642474	True	NM_001136258,NM_005443	chr4,chr4	+,-	SGMS2,PAPSS1	103246,-939
chr13:64314271-64314597	chr13	+	64314288	64314610	True	NM_022843,NR_002171	chr13,chr13	-,+	PCDH20,OR7E156P	-2324633,-2771
chr9:34377133-34377339	chr9	+	34377243	34377385	True	NM_147168,NM_147169,NM_020702,NM_147173	chr9,chr9,chr9,chr9	-,-,-,+	C9orf24,C9orf24,KIAA1161,NUDT2	4263,4263,-349,-47790
chr12:93325921-93326967	chr12	+	93326138	93326738	True	NM_001004330,NM_003566	chr12,chr12	+,-	PLEKHG7,EEA1	-195924,-3031
chr11:46638742-46639100	chr11	+	46638843	46639069	True	NR_024589,NR_024588,NM_014741,NR_024587,NM_173811,NM_001205119,NM_001205121,NM_001205120,NM_001205122,NM_001142673	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,-,+,+,+,+,+	ATG13,ATG13,ATG13,ATG13,HARBI1,ATG13,ATG13,ATG13,ATG13,ATG13	-68,-68,-68,-68,-66,-68,-68,-68,-68,-68
chr21:40031345-40031999	chr21	+	40031363	40031917	True	NM_005239,NM_004449,NM_001136154	chr21,chr21,chr21	+,-,-	ETS2,ERG,ERG	145931,1837,1837
chr3:19987356-19988338	chr3	+	19987356	19988079	True	NM_144715,NM_004162	chr3,chr3	-,+	EFHB,RAB5A	-11650,492
chr8:56364308-56364641	chr8	+	56364341	56364607	True	NR_027765,NM_024831	chr8,chr8	-,+	SBF1P1,TGS1	3324,321183
chr19:38745717-38745926	chr19	+	38745716	38745778	True	NM_021102,NM_001166103,NM_033256	chr19,chr19,chr19	+,+,-	SPINT2,SPINT2,PPP1R14A	9319,9319,1446
chr6:34393050-34393380	chr6	+	34393050	34393368	True	NM_001204091,NM_001203245,NM_020804,NM_001202470,NM_001014	chr6,chr6,chr6,chr6,chr6	-,-,+,-,-	RPS10,RPS10,PACSIN1,RPS10-NUDT3,RPS10	584,500,40484,584,584
chr17:5387657-5389156	chr17	+	5387883	5389176	True	NM_016041,NM_024039	chr17,chr17	-,+	DERL2,MIS12	368,1070
chr2:234262750-234262950	chr2	+	234262836	234262948	True	NM_018218,NM_152879	chr2,chr2	-,+	USP40,DGKD	211338,204
chr6:34099847-34100993	chr6	+	34099865	34101030	True	NM_002131,NM_000841	chr6,chr6	+,-	HMGA1,GRM4	103546,463
chr5:525550-525796	chr5	+	525633	525777	True	NM_007277,NM_004174	chr5,chr5	+,-	EXOC3,SLC9A3	-82350,-1084
chr9:133770684-133770971	chr9	+	133770688	133771018	True	NM_005157,NM_198180	chr9,chr9	+,-	ABL1,QRFP	-59908,-1463
chr16:2907612-2908013	chr16	+	2907783	2907929	True	NM_001142499,NM_022119	chr16,chr16	+,-	FLYWCH2,PRSS22	25266,292
chr16:33489627-33490040	chr16	+	33489651	33490031	True	NR_033866,NM_001205265	chr16,chr16	-,+	LOC390705,TP53TG3B	-190949,-227582
chr11:104949682-104949888	chr11	+	104949718	104949889	True	NM_001077244,NM_001223	chr11,chr11	+,-	GRIA4,CASP1	530910,22328
chr15:75038422-75039353	chr15	+	75038706	75039353	True	NM_000499,NM_000761	chr15,chr15	-,+	CYP1A1,CYP1A2	-20829,1830
chr1:156211473-156211741	chr1	+	156211536	156211780	True	NM_024897,NM_199173,NM_198406	chr1,chr1,chr1	-,+,-	PAQR6,BGLAP,PAQR6	6113,170,6062
chr11:111808881-111809699	chr11	+	111809044	111809734	True	NM_001885,NM_001037954	chr11,chr11	-,+	CRYAB,DIXDC1	-26571,-1168
chr12:63548394-63549749	chr12	+	63548407	63549763	True	NM_000706,NR_029661	chr12,chr12	-,+	AVPR1A,MIRLET7I	-1817,-551001
chr4:156302706-156304455	chr4	+	156302730	156303988	True	NM_000910,NM_001039580	chr4,chr4	+,-	NPY2R,MAP9	-173000,-4608
chr13:38923625-38924045	chr13	+	38923701	38924087	True	NM_016179,NM_016617	chr13,chr13	-,+	TRPC4,UFM1	-479762,10
chr9:95278436-95279983	chr9	+	95279126	95279995	True	NR_036505,NM_001197296	chr9,chr9	+,-	LOC100128361,ECM2	100336,18429
chr1:203733969-203734260	chr1	+	203733976	203734284	True	NM_017773,NR_027902,NM_001136190	chr1,chr1,chr1	+,-,+	LAX1,C1orf157,LAX1	-1,276158,-1
chr3:36926346-36928257	chr3	+	36926497	36927948	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	58650,106892
chr11:74864326-74865061	chr11	+	74864343	74864900	True	NM_001005285,NM_001145212,NM_007256,NM_001145211	chr11,chr11,chr11,chr11	-,+,+,+	OR2AT4,SLCO2B1,SLCO2B1,SLCO2B1	-63585,-2362,-2362,5943
chr8:67932729-67933039	chr8	+	67932734	67933044	True	NM_024790,NM_001013626	chr8,chr8	+,-	CSPP1,LRRC67	43558,7800
chr9:67678605-67679369	chr4	-	3551427	3551477	True	NM_002337,NM_173660	chr4,chr4	-,+	LRPAP1,DOK7	-17203,-86445
chr9:67678605-67679369	chr9	+	67678682	67679374	False	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	114865,247386
chr9:67678605-67679369	chr9	+	46269771	46269821	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2639041,417744
chr8:9918903-9919997	chr8	+	9918994	9920020	True	NM_001135670,NR_029668,NM_012331	chr8,chr8,chr8	+,-,+	MSRA,MIR124-1,MSRA	-7216,-158012,-7216
chr6:43608152-43609878	chr6	+	43608178	43609507	True	NM_014628,NM_152732,NM_019096,NM_001193341	chr6,chr6,chr6,chr6	+,+,-,+	MAD2L1BP,RSPH9,GTPBP2,RSPH9	-4652,3259,-11242,3259
chr17:10607548-10608716	chr17	+	10607547	10608761	True	NM_004589,NM_020233	chr17,chr17	-,+	SCO1,C17orf48	-6662,-6675
chr17:78390713-78391695	chr17	+	78390886	78391724	True	NM_001164637,NR_029376,NM_001164638,NM_173627	chr17,chr17,chr17,chr17	+,-,+,+	FLJ35220,LOC100294362,FLJ35220,FLJ35220	-1970,-1918,-1970,-1970
chr19:47852752-47853970	chr19	+	47852824	47853404	True	NM_001009813,NM_014681	chr19,chr19	-,+	MEIS3,DHX34	69445,-337
chr20:10416719-10417095	chr20	+	10416719	10416985	True	NM_170784,NM_018848,NM_001009608	chr20,chr20,chr20	-,-,+	MKKS,MKKS,C20orf94	-1853,-4149,-825
chrX:72299065-72299447	chrX	+	72299064	72299234	True	NM_001042506,NM_001012977	chrX,chrX	+,-	PABPC1L2B,PABPC1L2A	-75763,167
chrX:72299065-72299447	chrX	-	72223472	72223642	False	NR_026595,NM_001042506	chrX,chrX	-,+	NCRNA00246,PABPC1L2B	-59883,-171
chr1:36616543-36617568	chr1	+	36616715	36617478	True	NM_014408,NM_018067	chr1,chr1	-,+	TRAPPC3,MAP7D1	-1648,4324
chr20:18477928-18478463	chr20	+	18477980	18478477	True	NM_001172746,NM_006606,NM_032986,NM_032985,NM_006363	chr20,chr20,chr20,chr20,chr20	+,-,+,+,+	SEC23B,RBBP9,SEC23B,SEC23B,SEC23B	9732,-93,9710,9710,9710
chr2:85193817-85194411	chr2	+	85193946	85194290	True	NM_020122,NM_001080824	chr2,chr2	+,-	KCMF1,C2orf89	3940,-85694
chr16:22106088-22107500	chr16	+	22106356	22107546	True	NM_173615,NR_033694	chr16,chr16	+,-	VWA3A,PDZD9	-2544,-93925
chr10:44102278-44102589	chr10	+	44102301	44102625	True	NM_001099284,NM_145312	chr10,chr10	-,+	ZNF239,ZNF485	-32235,-497
chr22:51111569-51112158	chr22	+	51111594	51112070	True	NM_001080420,NM_001085428	chr22,chr22	+,-	SHANK3,ARSA	999,-44993
chr7:132318985-132320548	chr7	+	132319060	132320579	True	NM_001037126,NM_181775	chr7,chr7	+,-	EXOC4,PLXNA4	617243,12925
chr3:128718679-128719390	chr3	+	128718738	128719424	True	NM_020741,NM_024768	chr3,chr3	-,+	KIAA1257,CCDC48	-5752,1047
chr2:98705088-98705375	chr2	+	98705088	98705183	True	NM_015348,NM_144992	chr2,chr2	-,+	TMEM131,VWA3B	-92734,-1545
chr1:27956857-27957769	chr1	+	27956981	27957785	True	NM_001042747,NM_001042729,NM_005248,NM_001143912	chr1,chr1,chr1,chr1	-,-,-,+	FGR,FGR,FGR,FAM76A	-4230,-3875,3992,94704
chr8:143958898-143959409	chr8	+	143959110	143959372	True	NM_001026213,NM_002066,NM_000497	chr8,chr8,chr8	-,+,-	CYP11B1,GML,CYP11B1	1914,-42944,1914
chr19:49943020-49944322	chr19	+	49943056	49944136	True	NM_020309,NM_001145396	chr19,chr19	-,+	SLC17A7,ALDH16A1	722,12336
chr10:51769876-51770379	chr10	+	51770189	51770273	True	NM_001077665,NM_006327	chr10,chr10	+,-	AGAP6,TIMM23	-22170,-146853
chr13:70681909-70682210	chr13	+	70681950	70682242	True	NR_002717,NM_020866	chr13,chr13	+,-	ATXN8OS,KLHL1	-656,433
chr3:171760248-171760795	chr3	+	171760255	171760620	True	NM_001135095,NM_002662,NM_022763	chr3,chr3,chr3	+,-,+	FNDC3B,PLD1,FNDC3B	-1967,-231982,-2893
chr6:42685228-42686947	chr6	+	42685234	42686744	True	NM_000322,NR_037141	chr6,chr6	-,+	PRPH2,LOC442211	3669,8569
chr16:28219023-28220680	chr16	+	28219029	28220316	True	NM_015171,NM_001024401	chr16,chr16	-,+	XPO6,SBK1	2933,83523
chr20:48185527-48185920	chr20	+	48185785	48185953	True	NM_015266,NM_000961	chr20,chr20	+,-	SLC9A8,PTGIS	243296,-1078
chr1:156219478-156220214	chr1	+	156219676	156220196	True	NM_024897,NM_199173,NM_198406	chr1,chr1,chr1	-,+,-	PAQR6,BGLAP,PAQR6	-1833,-7776,-1884
chr2:132218883-132219580	chr2	+	132218900	132219262	True	NR_002826,NM_080386	chr2,chr2	-,+	LOC401010,TUBA3D	-16433,14403
chr2:132218883-132219580	chr2	+	46803353	46803717	False	NM_002643,NM_012249	chr2,chr2	-,+	PIGF,RHOQ	40898,-33851
chr2:132218883-132219580	chr2	-	130970370	130970622	False	NM_025029,NM_207312	chr2,chr2	+,-	MZT2B,TUBA3E	-30922,-14336
chr10:75174088-75174550	chr10	+	75174245	75174538	True	NM_173348,NM_001156,NM_004034	chr10,chr10,chr10	+,-,-	FAM149B1,ANXA7,ANXA7	-246425,-404,-404
chr9:126773495-126773779	chr9	+	126773565	126773655	True	NM_004789,NM_024820	chr9,chr9	+,-	LHX2,DENND1A	233,-81148
chr3:138021762-138022430	chr3	+	138021837	138022467	True	NM_012219,NM_178130	chr3,chr3	+,-	MRAS,TXNDC6	44157,26311
chr3:134207373-134207646	chr3	+	134207606	134207670	True	NM_025180,NM_001042400,NM_001042384,NM_015391,NM_001042383,NR_024400,NR_024401	chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,-,+,-,-	CEP63,CEP63,CEP63,ANAPC13,CEP63,ANAPC13,ANAPC13	-2612,-2762,-3084,-2743,-3084,-2741,-2775
chr3:149877052-149878167	chr3	+	149877104	149878020	True	NM_053024,NR_036538	chr3,chr3	-,+	PFN2,LOC646903	-188363,-188097
chr9:130828536-130829091	chr9	+	130828582	130829002	True	NM_197956,NM_001006641	chr9,chr9	-,+	NAIF1,SLC25A25	647,1476
chr3:155174893-155175850	chr3	+	155174961	155175719	True	NM_007289,NR_037902	chr3,chr3	+,-	MME,LOC100507537	-376933,-163472
chr4:56412667-56412903	chr4	+	56412860	56412922	True	NM_004898,NM_018475	chr4,chr4	-,+	CLOCK,TMEM165	125,-150821
chr1:12679839-12680076	chr1	+	12679840	12680124	True	NM_004753,NM_001013630	chr1,chr1	-,+	DHRS3,AADACL4	-2020,24441
chr22:21368681-21369101	chr22	+	21368691	21369117	True	NM_001159554,NR_003608,NM_005446	chr22,chr22,chr22	+,-,+	P2RX6,MGC16703,P2RX6	324,-115,346
chr15:25475370-25475679	chr15	+	25475374	25475728	True	NR_003353,NR_003358,NR_003496,NR_003352,NR_003497,NR_003351,NR_003344,NR_003345,NR_003346,NR_003347,NM_130838,NR_003303,NR_003348,NR_003349,NR_003350	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,+,-,+,+,+,+	SNORD115-38,SNORD115-43,HBII-52-27,SNORD115-37,HBII-52-28,SNORD115-36,SNORD115-29,SNORD115-30,SNORD115-31,SNORD115-32,UBE3A,SNORD115-11,SNORD115-33,SNORD115-34,SNORD115-35	9256,5503,-9775,7404,-7924,5503,5503,-5075,-3169,-1311,174975,5503,256,1805,3665
chr11:66510374-66511062	chr11	+	66510637	66511043	True	NM_024650,NM_006946	chr11,chr11	+,-	C11orf80,SPTBN2	1163,-21767
chrX:2609621-2609903	chrY	+	2559652	2559951	False	NM_003140,NM_002414,NM_001122898	chrY,chrY,chrY	-,+,+	SRY,CD99,CD99	95891,-475,-475
chrX:2609621-2609903	chrX	+	2609652	2609951	True	NR_037842,NM_002414,NM_001122898	chrX,chrX,chrX	-,+,+	NCRNA00102,CD99,CD99	-76264,-475,-475
chr10:27542210-27542889	chr10	+	27542322	27542622	True	NR_003525,NM_032844	chr10,chr10	-,+	LOC387646,MASTL	-1087,-98627
chr7:157128287-157129114	chr7	+	157128294	157129101	True	NR_029689,NM_058246,NM_005494	chr7,chr7,chr7	-,+,+	MIR153-2,DNAJB6,DNAJB6	238063,609,608
chr14:76450138-76451942	chr14	+	76450500	76451946	True	NM_001102564,NM_052873,NM_003239	chr14,chr14,chr14	+,+,-	C14orf179,C14orf179,TGFB3	149,149,-2408
chr19:51472979-51473482	chr19	+	51472986	51473130	True	NM_005551,NM_001012964,NM_001012965,NM_002774	chr19,chr19,chr19,chr19	+,-,-,-	KLK2,KLK6,KLK6,KLK6	-96348,-939,-939,-57
chr5:180230957-180231295	chr5	+	180230961	180231257	True	NM_001114617,NM_001114618,NM_001114619,NR_027183,NM_002406,NM_001114620	chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,+,-,-	MGAT1,MGAT1,MGAT1,LOC729678,MGAT1,MGAT1	5930,5610,-59,25701,-913,-59
chr22:38142644-38142871	chr22	+	38142839	38142917	True	NM_138797,NM_138632,NM_007032	chr22,chr22,chr22	-,+,+	ANKRD54,TRIOBP,TRIOBP	97486,-649,-649
chr7:156432742-156433010	chr7	+	156432744	156433014	True	NR_026865,NM_001184996,NM_001184997,NM_030936	chr7,chr7,chr7,chr7	-,+,+,+	C7orf13,RNF32,RNF32,RNF32	384,426,2656,338
chr1:44436417-44436839	chr1	+	44436429	44436769	True	NM_001384,NM_001005417,NM_003780,NM_004047,NM_001039457,NM_006934,NM_001039589	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-,+	DPH2,B4GALT2,B4GALT2,ATP6V0B,ATP6V0B,SLC6A9,DPH2	-827,9413,8096,3832,3832,46278,-827
chr11:108335179-108337020	chr11	+	108335428	108336890	True	NM_004398,NM_152587	chr11,chr11	+,-	DDX10,C11orf65	198925,1419
chr15:40456722-40458144	chr15	+	40456744	40457581	True	NM_001003940,NM_001211	chr15,chr15	-,+	BMF,BUB1B	-55669,-3597
chr22:27055215-27055986	chr22	+	27055223	27055438	True	NR_033321,NR_003491,NR_033320,NM_001887,NR_033319	chr22,chr22,chr22,chr22,chr22	+,+,+,-,+	MIAT,MIAT,MIAT,CRYBB1,MIAT	-1829,-1829,-1829,-41232,-1829
chr5:78361561-78362267	chr5	+	78361574	78362104	True	NM_013391,NM_001178005,NM_017614	chr5,chr5,chr5	-,+,+	DMGDH,BHMT2,BHMT2	3401,3442,3442
chr13:60739346-60740155	chr13	+	60739456	60740204	True	NM_001042517,NM_001146071	chr13,chr13	-,+	DIAPH3,TDRD3	-1337,230386
chr11:133774899-133775477	chr11	+	133774907	133775492	True	NR_024344,NR_027276	chr11,chr11	-,+	LOC283174,LOC100128239	-3272,126674
chr16:58497575-58497925	chr16	+	58497610	58497724	True	NM_001130487,NR_002978,NM_020465,NM_022910	chr16,chr16,chr16,chr16	+,-,+,+	NDRG4,SNORA46,NDRG4,NDRG4	269,84863,-112,1040
chr19:58845132-58845773	chr19	+	58845416	58845602	True	NM_181846,NM_130786	chr19,chr19	+,-	ZSCAN22,A1BG	-7090,19313
chr5:132200514-132201905	chr5	+	132200638	132201751	True	NM_014402,NM_052971,NM_005260	chr5,chr5,chr5	+,+,-	UQCRQ,LEAP2,GDF9	567,7606,-161
chr8:38088199-38088777	chr8	+	38088320	38088691	True	NM_001164232,NM_015214,NM_001164234,NM_001102559	chr8,chr8,chr8,chr8	+,+,+,-	DDHD2,DDHD2,DDHD2,PPAPDC1B	779,317,317,38097
chr12:8185733-8186169	chr12	+	8185753	8186099	True	NM_004054,NM_018416	chr12,chr12	-,+	C3AR1,FOXJ2	32906,-445
chr2:54200460-54201133	chr2	+	54200778	54200988	True	NM_014614,NM_138448	chr2,chr2	-,+	PSME4,ACYP2	-2801,141421
chr2:239230749-239231250	chr2	+	239230762	239231036	True	NM_015650,NM_022817,NM_001139490	chr2,chr2,chr2	+,-,+	TRAF3IP1,PER2,TRAF3IP1	-1628,-33555,-1628
chr19:11528480-11529049	chr19	+	11528725	11528989	True	NM_001001329,NM_001161616,NM_001035223	chr19,chr19,chr19	+,-,-	PRKCSH,RGL3,RGL3	17279,1079,1079
chr1:196795873-196796342	chr1	+	196795912	196796374	True	NM_002113,NM_198503	chr1,chr1	+,-	CFHR1,KCNT2	-7107,-218413
chr10:82220929-82222677	chr10	+	82220978	82222626	True	NM_001128309,NM_030927,NM_138812	chr10,chr10,chr10	+,+,-	TSPAN14,TSPAN14,DYDC1	-6991,-6991,-104478
chr10:124027652-124028038	chr10	+	124027654	124028006	True	NM_017615,NM_144587	chr10,chr10	-,+	NSMCE4A,BTBD16	-292911,2814
chr15:31615881-31616832	chr15	+	31615978	31616874	True	NM_015995,NM_002420	chr15,chr15	+,-	KLF13,TRPM1	2208,-222054
chr22:40766059-40766660	chr22	+	40766374	40766642	True	NM_020831,NM_015705	chr22,chr22	-,+	MKL1,SGSM3	266098,-48
chr7:39600542-39601388	chr7	+	39600662	39601100	True	NM_138701,NM_020192	chr7,chr7	-,+	C7orf11,C7orf36	573201,4902
chr11:73499230-73499585	chr11	+	73499305	73499484	True	NM_198896,NM_016055	chr11,chr11	-,+	RAB6A,MRPL48	-27104,-439
chr3:44517734-44518847	chr3	+	44517734	44518858	True	NM_018651,NM_181489	chr3,chr3	+,-	ZNF167,ZNF445	77854,361
chr11:104886400-104887122	chr11	+	104886412	104886996	True	NR_024239,NR_036562,NM_001136110,NM_001136109,NM_004347,NM_001077244,NM_001136112	chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,-,+,-	CASP5,CASP5,CASP5,CASP5,CASP5,GRIA4,CASP5	6949,6949,6949,6949,6949,593803,6949
chr7:73867509-73867786	chr7	+	73867510	73867786	True	NM_016328,NM_001199207,NM_005685,NM_181471	chr7,chr7,chr7,chr7	+,+,+,-	GTF2IRD1,GTF2IRD1,GTF2IRD1,RFC2	333,333,333,-198772
chr13:106116351-106117084	chr13	+	106116400	106117116	True	NM_001161814,NM_004093,NM_001161812,NM_172370	chr13,chr13,chr13,chr13	+,-,+,+	DAOA,EFNB2,DAOA,DAOA	1099,1070322,1448,1247
chr1:59757744-59758898	chr1	+	59757755	59758925	True	NR_027120,NM_018291,NM_001113411	chr1,chr1,chr1	-,+,+	LOC729467,FGGY,FGGY	-145276,3699,3699
chrX:54837900-54838443	chrX	+	54837905	54838489	True	NM_177433,NR_002953,NM_201222,NM_014599,NM_198510	chrX,chrX,chrX,chrX,chrX	+,+,+,+,-	MAGED2,SNORA11,MAGED2,MAGED2,ITIH5L	-3785,2313,-2463,-3159,-13232
chr1:226375650-226376074	chr1	+	226375794	226375893	True	NM_022735,NM_031944	chr1,chr1	-,+	ACBD3,MIXL1	-1371,35489
chr8:94769585-94770483	chr8	+	94770317	94770538	True	NM_001142301,NR_024522,NM_203390,NM_153704	chr8,chr8,chr8,chr8	+,+,-,+	TMEM67,TMEM67,RBM12B,TMEM67	-3301,-3301,-17093,-3301
chr9:139375883-139376896	chr9	+	139375977	139376890	True	NM_152571,NM_014866	chr9,chr9	+,-	C9orf163,SEC16A	1056,667
chr14:21493390-21493609	chr14	+	21493404	21493590	True	NM_001012264,NM_201536,NM_201537,NM_201535,NM_173846,NM_201538,NM_016250,NM_201539,NM_201541,NM_201540	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	-,-,-,-,+,-,-,-,-,-	RNASE13,NDRG2,NDRG2,NDRG2,TPPP2,NDRG2,NDRG2,NDRG2,NDRG2,NDRG2	9404,395,395,395,4754,-140,395,-140,-140,-140
chr2:238321779-238322198	chr2	+	238321954	238322246	True	NM_001042467,NM_057164,NM_057165,NM_057166,NM_057167,NM_004369	chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-	MLPH,COL6A3,COL6A3,COL6A3,COL6A3,COL6A3	73631,654,654,654,654,654
chr2:73912181-73912401	chr2	+	73912236	73912406	True	NM_016347,NR_003683	chr2,chr2	-,+	NAT8B,ALMS1P	16111,-40241
chr2:73912181-73912401	chr2	+	73852060	73852122	False	NM_003960,NR_003683	chr2,chr2	-,+	NAT8,ALMS1P	17465,19923
chr17:27168826-27169255	chr17	+	27168825	27169227	True	NM_018182,NM_001077498,NM_005702	chr17,chr17,chr17	-,-,+	C17orf63,C17orf63,ERAL1	664,664,12815
chr7:72991625-72992488	chr7	+	72991929	72992469	True	NM_001077621,NM_012453	chr7,chr7	+,-	VPS37D,TBL2	89704,594
chr11:5007969-5008739	chr11	+	5008055	5008546	True	NM_021801,NM_001004748	chr11,chr11	+,-	MMP26,OR51A2	877,-31112
chr11:34131688-34131906	chr11	+	34131703	34131861	True	NM_001144030,NM_024662,NM_005574	chr11,chr11,chr11	+,+,-	NAT10,NAT10,LMO2	-4643,-4643,-217867
chr11:63662315-63662734	chr11	+	63662321	63662773	True	NM_017490,NM_173587	chr11,chr11	+,-	MARK2,RCOR2	-6385,21593
chr7:103848548-103848750	chr7	+	103848549	103848683	True	NM_002553,NM_199000,NM_181747	chr7,chr7,chr7	-,+,-	ORC5,LHFPL3,ORC5	-54,120420,-54
chr22:23484295-23484615	chr22	+	23484311	23484512	True	NM_004914,NM_014433	chr22,chr22	+,-	RAB36,RTDR1	3000,-70
chr2:111120356-111121022	chr2	+	111120382	111120864	True	NR_037626,NR_027244	chr2,chr2	+,-	LOC100507334,LOC151009	-117231,21299
chr2:111120356-111121022	chr2	-	110765680	110766162	False	NR_037627,NR_036225	chr2,chr2	+,-	LOC100288570,MIR4267	-60464,61520
chr9:19380334-19380562	chr9	+	19380341	19380561	True	NM_001010,NM_001010887	chr9,chr9	-,+	RPS6,ACER2	-106,28363
chr2:161994339-161995133	chr2	+	161994563	161995149	True	NM_133484,NM_016836,NM_004180	chr2,chr2,chr2	+,-,+	TANK,RBMS1,TANK	-1157,-644245,-1157
chr10:49090634-49091074	chr10	+	49090718	49090984	True	NM_001137548,NM_002750	chr10,chr10	-,+	FAM25C,MAPK8	116899,518702
chr10:49090634-49091074	chr10	+	88914616	88914695	False	NM_019054,NM_005271	chr10,chr10	+,-	FAM35A,GLUD1	-59720,-59840
chr10:49090634-49091074	chr10	+	46901102	46901234	False	NR_027632,NM_181519	chr10,chr10	+,-	FAM35B,SYT15	-3520,69425
chr10:49090634-49091074	chr10	+	47383179	47383312	False	NR_024495,NR_027634	chr10,chr10	-,+	LOC642826,FAM35B2	-139685,-3518
chr14:94760434-94760694	chr14	+	94760433	94760741	True	NM_001100607,NM_058237,NM_016186	chr14,chr14,chr14	-,+,-	SERPINA10,PPP4R4,SERPINA10	-837,-119836,-1072
chr5:525796-526266	chr5	+	525911	526217	True	NM_007277,NM_004174	chr5,chr5	+,-	EXOC3,SLC9A3	-82628,-1362
chr16:19181237-19182173	chr16	+	19181346	19182221	True	NM_016524,NM_015092	chr16,chr16	+,-	SYT17,SMG1	-1761,-243620
chr2:43060169-43061387	chr2	+	43060224	43061334	True	NM_020744,NM_012205	chr2,chr2	+,-	MTA3,HAAO	-264604,-40473
chr19:10217843-10218425	chr19	+	10218007	10218309	True	NM_002566,NM_031917,NM_001198690,NR_003688,NR_004381,NM_001040664,NM_020230	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+,+	P2RY11,ANGPTL6,PPAN-P2RY11,SNORD105B,SNORD105,PPAN-P2RY11,PPAN	3887,-4582,-1160,2115,17,-1160,-1160
chr2:176949628-176950001	chr2	+	176949641	176950033	True	NM_001080458,NM_000523	chr2,chr2	-,+	EVX2,HOXD13	-951,7498
chr19:47634352-47634718	chr19	+	47634374	47634756	True	NM_015168,NR_027280,NM_001145713,NM_005500,NM_001145714	chr19,chr19,chr19,chr19,chr19	-,+,+,+,+	ZC3H4,SAE1,SAE1,SAE1,SAE1	-17365,-310,-345,-345,-345
chr16:56995199-56995793	chr16	+	56995317	56995676	True	NM_000078,NM_024946	chr16,chr16	+,-	CETP,FAM192A	158,224351
chr11:64792392-64793553	chr11	+	64792745	64793229	True	NM_013306,NM_147777,NM_138456	chr11,chr11,chr11	+,+,-	SNX15,SNX15,BATF2	1650,1650,-28228
chr7:44079532-44079739	chr7	+	44079555	44079745	True	NR_024116,NM_001014436,NM_001122956,NR_015401,NM_014063,NR_024416	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,+,+	RASA4P,DBNL,DBNL,FLJ35390,DBNL,FLJ35390	527,4493,4493,-908,4493,-539
chr7:44079532-44079739	chr7	+	102134725	102134899	False	NM_006234,NM_152892	chr7,chr7	-,+	POLR2J,LRWD1	-15344,-29386
chr7:44079532-44079739	chr7	+	102233894	102234068	False	NM_001166339,NM_001097615	chr7,chr7	+,-	SPDYE2L,POLR2J3	-42266,-20826
chr7:44079532-44079739	chr7	+	102329804	102329978	False	NM_032959,NM_001166339	chr7,chr7	-,+	POLR2J2,SPDYE2L	-17622,-39083
chrX:49396941-49397499	chrX	+	49397236	49397476	True	NM_003785,NM_001468	chrX,chrX	-,+	PAGE1,GAGE1	63170,-33671
chr1:40506957-40507663	chr1	+	40507066	40507642	True	NM_006367,NM_000310,NM_001105530	chr1,chr1,chr1	+,-,+	CAP1,PPT1,CAP1	-863,55550,-863
chr1:240252042-240253180	chr1	+	240252177	240253187	True	NM_022469,NM_020066	chr1,chr1	-,+	GREM2,FMN2	522326,1997
chr11:7331970-7332455	chr11	+	7331970	7332223	True	NM_013249,NM_175733	chr11,chr11	-,+	ZNF214,SYT9	-290384,-58841
chr12:109273997-109275675	chr12	+	109274059	109275140	True	NM_001917,NM_001161330	chr12,chr12	+,-	DAO,SSH1	-253,-22700
chr6:153304925-153305212	chr6	+	153304935	153305233	True	NM_194435,NM_012177,NM_001142522	chr6,chr6,chr6	+,-,-	VIP,FBXO5,FBXO5	-233053,-732,-195
chr11:67168128-67168405	chr11	+	67168153	67168393	True	NM_198517,NM_002708,NM_001008709,NM_004584,NM_206873	chr11,chr11,chr11,chr11,chr11	+,-,-,+,-	TBC1D10C,PPP1CA,PPP1CA,RAD9A,PPP1CA	3018,1033,1033,-8781,1033
chr4:2813540-2813865	chr4	+	2813610	2813882	True	NM_001145855,NM_001145856,NM_024309,NM_003023	chr4,chr4,chr4,chr4	+,+,-,+	SH3BP2,SH3BP2,TNIP2,SH3BP2	63,6029,-55507,6658
chr4:30720949-30721246	chr4	+	30720985	30721089	True	NM_002589,NM_000730,NM_032457,NM_001173523,NM_032456	chr4,chr4,chr4,chr4,chr4	+,-,+,+,+	PCDH7,CCKAR,PCDH7,PCDH7,PCDH7	947,-4228943,947,947,940
chr5:159793885-159795345	chr5	+	159794122	159795057	True	NM_031908,NM_004219	chr5,chr5	-,+	C1QTNF2,PTTG1	2641,53807
chrX:67917600-67918378	chrX	+	67917793	67918417	True	NM_001142504,NM_002547	chrX,chrX	+,-	STARD8,OPHN1	-4363,-264494
chr15:76627582-76627921	chr15	+	76627584	76627962	True	NM_001127716,NM_145805	chr15,chr15	-,+	ETFA,ISL2	-23774,1184
chr13:19526408-19526644	chr13	+	19526461	19526693	True	NR_027995,NR_026852	chr13,chr13	-,+	LOC284232,LOC348021	-80352,55705
chr20:32318404-32319220	chr20	+	32318777	32319055	True	NM_032819,NM_183397	chr20,chr20	+,-	ZNF341,PXMP4	752,-10641
chr14:95878034-95878476	chr14	+	95878037	95878347	True	NM_016417,NR_026779	chr14,chr14	+,-	GLRX5,C14orf139	122975,-1610
chr14:23503820-23504053	chr14	+	23503893	23504099	True	NM_001144932,NM_001099780,NM_002797,NM_001130725	chr14,chr14,chr14,chr14	-,+,-,-	PSMB5,PSMB11,PSMB5,PSMB5	305,7276,305,380
chr14:24658813-24659384	chr14	+	24658912	24659427	True	NM_024658,NM_006405,NM_001014842,NM_001184739	chr14,chr14,chr14,chr14	-,-,-,+	IPO4,TM9SF1,TM9SF1,TSSK4	-788,5508,5508,15498
chr1:201182690-201183351	chr1	+	201182702	201183050	True	NM_001164586,NM_016456	chr1,chr1	+,-	IGFN1,TMEM9	-22800,-59070
chr13:26624485-26624810	chr13	+	26624526	26624662	True	NM_001260,NM_001007538	chr13,chr13	+,-	CDK8,SHISA2	204093,586
chr2:113237835-113238778	chr2	+	113237939	113238605	True	NM_153712,NM_001164463	chr2,chr2	+,-	TTL,RGPD8	1137,-46717
chr9:114503339-114503565	chr9	+	114503525	114503626	True	NM_001080551,NM_001198664	chr9,chr9	-,+	C9orf84,GNG10	18250,-79735
chr8:27687687-27688724	chr8	+	27687979	27688627	True	NM_001017420,NM_018492	chr8,chr8	+,-	ESCO2,PBK	-55986,6779
chr2:26255040-26255624	chr2	+	26255160	26255546	True	NM_002254,NM_016131	chr2,chr2	-,+	KIF3C,RAB10	-49717,1182
chr6:144164073-144164305	chr6	+	144164207	144164344	True	NM_001080952,NM_032860	chr6,chr6	-,+	PLAGL1,LTV1	165247,163
chr9:40731-41416	chr12	-	60423	60473	False	NR_028269,NR_026823	chr12,chr12	+,-	LOC100288778,FAM138D	27510,88989
chr9:40731-41416	chr2	-	114329496	114329918	True	NR_026821,NR_024005	chr2,chr2	+,-	FAM138B,DDX11L2	5040,29285
chr1:46047454-46047968	chr1	+	46047707	46048011	True	NM_002482,NM_001195193,NM_001114938,NM_152298	chr1,chr1,chr1,chr1	+,+,-,+	NASP,NASP,CCDC17,NASP	1648,1648,41770,1648
chr2:238706590-238707007	chr2	+	238706747	238706985	True	NM_001080504,NR_033308	chr2,chr2	+,-	RBM44,RAB17	402,-206978
chr9:129574196-129575418	chr9	+	129574431	129575217	True	NM_014007,NM_001135776,NM_012098	chr9,chr9,chr9	+,+,-	ZBTB43,ZBTB43,ANGPTL2	-7197,-7197,309877
chr15:35376069-35377034	chr12	-	7947773	7947878	False	NM_024865,NM_203503	chr12,chr12	+,-	NANOG,CLEC4C	-5830,-45704
chr15:35376069-35377034	chr15	+	35376206	35376938	True	NM_014106,NR_003144	chr15,chr15	-,+	ZNF770,LOC723972	-95709,152588
chr6:116937625-116938080	chr6	+	116937667	116938129	True	NM_145062,NM_001161664,NM_001010892	chr6,chr6,chr6	-,+,+	ZUFSP,RSPH4A,RSPH4A	51894,-76,-76
chr5:177209023-177209283	chr5	+	177209096	177209184	True	NR_003615,NM_173663	chr5,chr5	+,-	LOC728554,FAM153A	93077,-1591
chr5:177209023-177209283	chr5	-	177434658	177434722	False	NM_006261,NM_001079527	chr5,chr5	-,+	PROP1,FAM153C	-11415,966
chr5:177209023-177209283	chr5	-	175489038	175489126	False	NM_032361,NM_001079529	chr5,chr5	-,+	THOC3,FAM153B	-93493,22782
chr12:70637746-70637999	chr12	+	70637760	70638014	True	NR_037615,NM_014515,NM_002837,NM_001199303,NM_001199302	chr12,chr12,chr12,chr12,chr12	+,+,-,+,+	CNOT2,CNOT2,PTPRB,CNOT2,CNOT2	-327,-1047,365660,-327,-1011
chr1:93914521-93914790	chr1	+	93914560	93914786	True	NM_001024948,NR_034089,NM_017737,NM_001164473	chr1,chr1,chr1,chr1	+,-,+,+	FNBP1L,LOC100131564,FNBP1L,FNBP1L	-929,-103192,-929,-929
chr12:28474631-28476185	chr12	+	28474862	28475808	True	NM_018318,NM_002820	chr12,chr12	+,-	CCDC91,PTHLH	-64799,-349946
chr3:186649670-186649929	chr3	+	186649704	186649834	True	NM_181573,NM_173217,NM_173216	chr3,chr3,chr3	-,+,+	RFC4,ST6GAL1,ST6GAL1	-125220,-1442,-1442
chr14:22041469-22042362	chr14	+	22041491	22042138	True	NM_001001912,NM_001005465	chr14,chr14	+,-	OR4E2,OR10G3	91158,-2616
chr11:93575433-93575987	chr11	+	93575465	93575879	True	NM_001144871,NM_004268	chr11,chr11	-,+	C11orf90,MED17	7839,-58119
chr11:89326068-89327077	chr11	+	89326180	89326922	True	NM_153696,NM_001143837	chr11,chr11	+,-	FOLH1B,NOX4	65542,-3401
chr5:170208513-170209466	chr5	+	170208520	170209484	True	NM_014211,NM_004137	chr5,chr5	+,-	GABRP,KCNMB1	1238,-391882
chr21:45597082-45597847	chr21	+	45597345	45597790	True	NM_198155,NM_015259	chr21,chr21	+,-	C21orf33,ICOSLG	-43902,63107
chr3:45883427-45883697	chr3	+	45883600	45883726	True	NM_020347,NM_006641	chr3,chr3	-,+	LZTFL1,CCR9	21,44269
chr3:48670083-48670419	chr3	+	48670261	48670461	True	NM_001040454,NM_134263,NM_033629,NM_022911,NM_134426	chr3,chr3,chr3,chr3,chr3	-,-,+,-,-	SLC26A6,SLC26A6,TREX1,SLC26A6,SLC26A6	868,2515,-163083,2515,2515
chr17:4807651-4808870	chr17	+	4807734	4808555	True	NM_000080,NM_001145536	chr17,chr17	-,+	CHRNE,C17orf107	-1365,-4837
chr19:42497156-42498091	chr19	+	42497417	42498041	True	NM_152296,NM_022752	chr19,chr19	-,+	ATP1A3,ZNF574	391,82248
chr19:11784158-11785041	chr19	+	11784178	11784926	True	NR_028594,NM_001080493	chr19,chr19	+,-	ZNF833P,ZNF823	68,64884
chr9:123342586-123343243	chr9	+	123342645	123342978	True	NR_027442,NM_018249,NM_001011649	chr9,chr9,chr9	+,-,-	LOC100288842,CDK5RAP2,CDK5RAP2	212796,-208,-208
chr11:4464974-4466529	chr11	+	4465166	4466552	True	NM_001005172,NM_003141	chr11,chr11	+,-	OR52K2,TRIM21	3972,-50240
chr6:82958054-82958629	chr6	+	82958077	82958370	True	NM_006670,NM_015525	chr6,chr6	+,-	TPBG,IBTK	114552,-629
chr4:105412238-105412492	chr4	+	105412270	105412420	True	NM_025212,NM_017628	chr4,chr4	-,+	CXXC4,TET2	97,654611
chrX:39648808-39649213	chrX	+	39649074	39649258	True	NM_005765,NM_001123385	chrX,chrX	+,-	ATP6AP2,BCOR	790957,307511
chr4:190948624-190950506	chr10	+	135440522	135442199	False	NM_001127386	chr10	+	DUX4L2	38168
chr4:190948624-190950506	chr4	+	190948635	190950312	True	NM_012147,NM_001005217	chr4,chr4	+,-	DUX2,FRG2	38554,-223
chr15:49165860-49166600	chr15	+	49165981	49166539	True	NM_014335,NM_014985	chr15,chr15	+,-	EID1,CEP152	3750,-62638
chr7:106685940-106687826	chr7	+	106685966	106687865	True	NM_002736,NM_175884	chr7,chr7	+,-	PRKAR2B,FLJ36031	-839,-384332
chr7:83827811-83829194	chr7	+	83827975	83829199	True	NM_006080,NM_000840	chr7,chr7	-,+	SEMA3A,GRM3	-3758,2444030
chr19:54618931-54619373	chr19	+	54618940	54619274	True	NM_013342,NM_015629	chr19,chr19	-,+	TFPT,PRPF31	-27,-201
chr4:3532378-3532726	chr4	+	3532433	3532645	True	NM_002337,NM_173660	chr4,chr4	-,+	LRPAP1,DOK7	1629,-67451
chr11:2482231-2482592	chr11	+	2482385	2482629	True	NM_181798,NM_014555	chr11,chr11	+,-	KCNQ1,TRPM5	54,-38110
chr1:148930542-148930824	chr2	-	91845495	91845555	False	NR_003503,NR_027238	chr2,chr2	+,-	GGT8P,LOC654342	117812,2470
chr1:148930542-148930824	chr1	+	148930582	148930820	True	NR_027355,NR_027354,NM_001024599,NR_027356	chr1,chr1,chr1,chr1	+,+,-,+	LOC645166,LOC645166,HIST2H2BF,LOC645166	-2347,-228,468459,-2347
chr17:17348176-17349009	chr17	+	17348307	17348919	True	NM_018019,NM_001199989	chr17,chr17	+,-	MED9,RASD1	31380,50840
chrX:137794275-137795107	chrX	+	137794286	137795126	True	NM_004114,NR_028597	chrX,chrX	-,+	FGF13,SRD5A1P1	-459,733851
chr3:138826609-138826998	chr3	+	138826634	138827036	True	NM_001134657,NR_026783	chr3,chr3	-,+	PRR23C,BPESC1	-62900,-3658
chr22:30956465-30956704	chr22	+	30956573	30956695	True	NM_004861,NM_000355	chr22,chr22	-,+	GAL3ST1,TCN2	4231,46374
chr6:28367126-28367329	chr6	+	28367137	28367287	True	NM_024493,NM_001163391,NR_028077	chr6,chr6,chr6	+,-,-	ZKSCAN3,ZSCAN12,ZSCAN12	-49497,307,307
chr2:202122059-202122469	chr2	+	202122254	202122469	True	NM_001080125,NM_001127391,NM_033356	chr2,chr2,chr2	+,-,+	CASP8,ALS2CR12,CASP8	284,99683,2753
chr10:72201906-72203780	chr10	+	72202004	72203669	True	NM_018055,NM_014431	chr10,chr10	-,+	NODAL,KIAA1274	-539,34894
chr14:105218756-105219505	chr14	+	105218839	105219495	True	NM_005163,NM_021709,NM_006427	chr14,chr14,chr14	-,+,+	AKT1,SIVA1,SIVA1	40493,-26,-26
chr16:84003248-84003525	chr16	+	84003276	84003474	True	NM_001080442,NM_019065	chr16,chr16	-,+	SLC38A8,NECAB2	72338,-1090
chr2:74880513-74881165	chr2	+	74880671	74881177	True	NM_138804,NM_004263	chr2,chr2	-,+	C2orf65,SEMA4F	-5507,215
chr2:114254436-114255214	chr2	+	114254439	114254499	True	NM_012184,NR_024005	chr2,chr2	+,-	FOXD4L1,DDX11L2	2161,104704
chr16:89557543-89557977	chr16	+	89557716	89558010	True	NM_199367,NM_013275	chr16,chr16	+,-	SPG7,ANKRD11	16794,-747
chr1:94884396-94884698	chr1	+	94884509	94884735	True	NM_002858,NM_001178096,NM_001122674	chr1,chr1,chr1	+,-,+	ABCD3,F3,ABCD3	-627,122728,-627
chr11:64528648-64529063	chr11	+	64528685	64528767	True	NM_006244,NM_001164716,NM_005609	chr11,chr11,chr11	+,-,-	PPP2R5B,PYGM,PYGM	163375,-498,-498
chr6:26200096-26200547	chr6	+	26200146	26200590	True	NM_021065,NM_003545,NM_003530,NM_003522	chr6,chr6,chr6,chr6	-,+,-,+	HIST1H2AD,HIST1H4E,HIST1H3D,HIST1H2BF	-675,4282,-682,-415
chr5:122371643-122371897	chr5	+	122371663	122371903	True	NM_001136239,NM_000943	chr5,chr5	+,-	PRDM6,PPIC	52937,572
chr6:76160525-76161281	chr6	+	76160704	76160893	True	NM_015687,NM_001100409	chr6,chr6	-,+	FILIP1,SENP6	42668,150728
chr9:139703948-139705084	chr9	+	139704088	139704846	True	NM_024718,NM_001173989,NM_001173988,NR_024580	chr9,chr9,chr9,chr9	+,+,+,-	C9orf86,C9orf86,C9orf86,LOC100131193	-1770,-1770,-1770,-788
chr5:32600321-32600868	chr5	+	32600323	32600630	True	NM_016107,NM_006713	chr5,chr5	-,+	ZFR,SUB1	-155479,-14769
chr8:21970271-21970740	chr8	+	21970278	21970501	True	NM_024815,NM_022749	chr8,chr8	-,+	NUDT18,FAM160B2	-3346,-23627
chr5:14581219-14581505	chr5	+	14581233	14581403	True	NM_019018,NR_037899	chr5,chr5	+,-	FAM105A,LOC100128508	487,195790
chrX:153626579-153627024	chrX	+	153626610	153627036	True	NM_006013,NM_006730,NR_000011,NR_026898	chrX,chrX,chrX,chrX	+,-,+,+	RPL10,DNASE1L1,SNORA70,RPL10	-90,10589,1585,-90
chr5:96517287-96518724	chr5	+	96517345	96518599	True	NM_001159749,NM_018343,NM_175920	chr5,chr5,chr5	-,-,+	RIOK2,RIOK2,LNPEP	456,456,-223252
chr19:47552074-47552453	chr19	+	47552108	47552232	True	NM_002517,NM_017854	chr19,chr19	+,-	NPAS1,TMEM160	-28016,-226
chr10:124457439-124457904	chr10	+	124457575	124457943	True	NM_001010912,NR_003570	chr10,chr10	-,+	C10orf120,FLJ46361	1445,58266
chr9:138394122-138394657	chr9	+	138394153	138394625	True	NM_016034,NM_001048265,NM_144654	chr9,chr9,chr9	+,-,-	MRPS2,C9orf116,C9orf116	-1721,-2392,-2392
chr14:35856105-35856892	chr14	+	35856131	35856819	True	NM_002791,NM_020529	chr14,chr14	+,-	PSMA6,NFKBIA	-94609,17198
chr5:146352817-146353674	chr5	+	146352966	146353700	True	NM_145001,NM_181674	chr5,chr5	+,-	STK32A,PPP2R2B	260878,82056
chr14:103014215-103014573	chr14	+	103014312	103014452	True	NM_152326,NR_036192	chr14,chr14	-,+	ANKRD9,MIR4309	-38184,-8389
chr20:3995463-3995737	chr20	+	3995487	3995731	True	NM_001134337,NR_029519,NM_001134338,NM_007219	chr20,chr20,chr20,chr20	-,+,-,-	RNF24,MIR103-2,RNF24,RNF24	535,-97397,535,373
chr18:18692056-18692264	chr18	+	18692088	18692248	True	NM_005406,NM_001142966	chr18,chr18	-,+	ROCK1,GREB1L	-276,129954
chr11:64514247-64514554	chr11	+	64514250	64514467	True	NM_001098671,NM_001098670,NM_153378,NM_153819	chr11,chr11,chr11,chr11	-,-,+,-	RASGRP2,RASGRP2,SLC22A12,RASGRP2	-2620,-1921,-156019,-1322
chr2:178971110-178971541	chr2	+	178971133	178971275	True	NM_001077197,NM_152945	chr2,chr2	-,+	PDE11A,RBM45	1843,5906
chr5:169075930-169076828	chr5	+	169076046	169076602	True	NM_001129891,NM_004946	chr5,chr5	-,+	FAM196B,DOCK2	331192,-11846
chr6:1099724-1100705	chr6	+	1099745	1100615	True	NR_027116,NR_027115,NM_033260	chr6,chr6,chr6	-,-,+	LOC285768,LOC285768,FOXQ1	1002,1002,212059
chr4:143766279-143766538	chr4	+	143766448	143766536	True	NM_001101669,NM_032557,NM_003866	chr4,chr4,chr4	-,+,-	INPP4B,USP38,INPP4B	1118,339533,1118
chr8:21945315-21945683	chr8	+	21945314	21945394	True	NM_024815,NM_022749	chr8,chr8	-,+	NUDT18,FAM160B2	21590,1319
chr3:126707499-126707959	chr3	+	126707604	126707920	True	NM_032242,NM_052883	chr3,chr3	+,-	PLXNA1,TXNRD3	-218,-333637
chr2:20644946-20645178	chr2	+	20644945	20645211	True	NM_015317,NM_004040	chr2,chr2	-,+	PUM2,RHOB	-117801,1623
chrX:144903689-144903983	chrX	+	144903722	144904020	True	NM_004709,NM_032539,NM_001144010,NM_001144003,NM_001144004,NM_001144005,NM_001144006,NR_030589,NM_001144008,NM_001144009	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,+,+,-,+,+	CXorf1,SLITRK2,SLITRK2,SLITRK2,SLITRK2,SLITRK2,SLITRK2,MIR890,SLITRK2,SLITRK2	4907,-4430,-911,-4430,-4430,-4430,-911,171899,-911,-911
chr22:51016799-51017160	chr22	+	51016989	51017143	True	NM_001145137,NM_001145136,NM_001145135,NM_001145134,NR_021492,NM_005198,NM_152245,NR_027928,NM_004377,NM_152246	chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,+,-,-,-,-,-	CPT1B,CPT1B,CPT1B,CPT1B,LOC100144603,CHKB,CPT1B,CHKB-CPT1B,CPT1B,CPT1B	-483,3,3,3,4311,4335,3,4335,-95,-95
chr19:3770026-3770571	chr19	+	3770031	3770551	True	NM_032753,NM_172251,NM_004886	chr19,chr19,chr19	-,+,-	RAX2,MRPL54,APBA3	1718,-7417,-8358
chr1:201618311-201618652	chr1	+	201618316	201618692	True	NM_020443,NM_004078	chr1,chr1	+,-	NAV1,CSRP1	-917,-141929
chr19:10613876-10614102	chr19	+	10614041	10614127	True	NM_203500,NM_012289,NM_032885	chr19,chr19,chr19	-,-,+	KEAP1,KEAP1,ATG4D	5,-560,40519
chr1:108504985-108506568	chr1	+	108505183	108506506	True	NM_001143987,NM_006113	chr1,chr1	+,-	NBPF6,VAV3	486397,1089
chr21:37850128-37851707	chr21	+	37850201	37851567	True	NM_005441,NM_144492,NM_001146079	chr21,chr21,chr21	+,-,-	CHAF1B,CLDN14,CLDN14	-92563,871,871
chr3:10068846-10069308	chr3	+	10068849	10069301	True	NR_002786,NM_033084,NM_001018115	chr3,chr3,chr3	-,+,+	CIDECP,FANCD2,FANCD2	-1029,-787,-787
chrX:52239119-52239790	chrX	+	52239187	52239793	True	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,+,+,+,+,+,+,+,+,+,+	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	-275,-219,-219,-428,-219,-219,-219,-275,-428,-275,-428,-428,-428,-275,-275
chrX:52239119-52239790	chrX	-	52259379	52259985	False	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,-,-,-,-,-,-,-,-,-,-	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	275,219,219,428,219,219,219,275,428,275,428,428,428,275,275
chrX:52239119-52239790	chrX	+	52512138	52512744	False	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,+,+,+,+,+,+,+,+,+,+	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	-275,-219,-219,-428,-219,-219,-219,-275,-428,-275,-428,-428,-428,-275,-275
chrX:52239119-52239790	chrX	-	52532319	52532925	False	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,-,-,-,-,-,-,-,-,-,-	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	275,219,219,428,219,219,219,275,428,275,428,428,428,275,275
chrX:52239119-52239790	chrX	-	52545213	52545819	False	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,-,-,-,-,-,-,-,-,-,-	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	275,219,219,428,219,219,219,275,428,275,428,428,428,275,275
chr17:80010725-80011518	chr17	+	80010752	80011432	True	NM_004127,NM_002917,NM_212492	chr17,chr17,chr17	+,-,+	GPS1,RFNG,GPS1	-1040,-1102,-1040
chr12:111023194-111024359	chr12	+	111023222	111024022	True	NM_139283,NM_001082537	chr12,chr12	-,+	PPTC7,TCTN1	-2158,27809
chr7:1271256-1271720	chr7	+	1271304	1271644	True	NM_001080461,NM_182491	chr7,chr7	+,-	UNCX,ZFAND2A	1009,-71449
chr13:20440659-20441856	chr13	+	20441169	20441742	True	NM_001142684,NM_001039649,NM_003453,NM_001039650	chr13,chr13,chr13,chr13	-,-,+,-	ZMYM5,ZMYM5,ZMYM2,ZMYM5	-3393,-3393,91067,-3393
chr6:43211466-43211666	chr6	+	43211546	43211634	True	NM_032538,NM_199184	chr6,chr6	+,-	TTBK1,C6orf108	-375,-14335
chr3:186437822-186438767	chr3	+	186437824	186438556	True	NM_001102416,NM_002916,NM_001166451,NM_000893	chr3,chr3,chr3,chr3	+,-,+,+	KNG1,RFC4,KNG1,KNG1	-2779,85792,-2779,-2779
chr11:68050142-68050342	chr11	+	68050167	68050315	True	NM_022338,NM_002335	chr11,chr11	-,+	C11orf24,LRP5	-10698,29792
chr13:46961041-46961249	chr13	+	46961102	46961196	True	NM_001164211,NM_025113	chr13,chr13	+,-	LRCH1,C13orf18	166099,489
chr8:145981576-145982817	chr8	+	145981866	145982864	True	NM_138367,NM_213605	chr8,chr8	-,+	ZNF251,ZNF517	-896,41396
chr19:18195965-18197338	chr19	+	18196081	18197297	True	NM_015016,NM_005535,NM_153701	chr19,chr19,chr19	+,-,-	MAST3,IL12RB1,IL12RB1	11305,462,462
chr22:44963592-44964231	chr22	+	44963615	44964167	True	NR_028409,NM_032287,NR_028411,NR_028410	chr22,chr22,chr22,chr22	+,-,+,+	NCRNA00207,LDOC1L,NCRNA00207,NCRNA00207	1052,-69610,1052,1052
chr12:120636989-120637707	chr12	+	120637014	120637734	True	NM_053275,NM_012240,NM_006836,NM_001002	chr12,chr12,chr12,chr12	-,+,-,-	RPLP0,SIRT4,GCN1L1,RPLP0	1333,102389,-4501,1333
chr17:72675172-72676813	chr17	+	72675434	72676708	True	NM_175738,NM_139018	chr17,chr17	+,-	RAB37,CD300LF	-8229,32450
chrX:102840511-102840822	chrX	+	102840510	102840821	True	NM_001006935,NM_001006937,NM_080879,NM_024863	chrX,chrX,chrX,chrX	+,+,-,+	TCEAL4,TCEAL4,RAB40A,TCEAL4	-142,-142,-66093,-142
chr9:134405221-134405435	chr9	+	134405291	134405475	True	NM_001135954,NM_007171,NM_031432	chr9,chr9,chr9	-,+,-	UCK1,POMT1,UCK1	1237,-27053,1237
chr10:116700173-116701395	chr10	+	116700199	116701442	True	NM_139169,NM_001003408	chr10,chr10	+,-	TRUB1,ABLIM1	-2305,-255785
chr11:67274166-67274377	chr11	+	67274239	67274421	True	NM_003977,NM_005851,NM_004910,NM_001130848	chr11,chr11,chr11,chr11	+,-,-,-	AIP,CDK2AP2,PITPNM1,PITPNM1	-23785,1731,-1396,-1396
chr2:208888465-208890077	chr2	+	208888999	208890051	True	NM_001080475,NM_001178000	chr2,chr2	-,+	PLEKHM3,PIKFYVE	283,240939
chr1:33494176-33495105	chr1	+	33494226	33494930	True	NM_001625,NR_037592,NM_001199199,NM_013411,NR_037591,NM_052998	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,+	AK2,AK2,AK2,AK2,AK2,ADC	7632,7632,7632,7632,7632,51783
chr4:38867968-38868819	chr4	+	38868225	38868800	True	NM_006068,NM_138389,NR_030300,NR_033290	chr4,chr4,chr4,chr4	-,+,+,+	TLR6,FAM114A1,MIR574,FAM114A1	-9787,553,852,553
chr17:34992976-34993414	chr17	+	34993058	34993447	True	NM_024864,NM_001033580	chr17,chr17	+,-	MRM1,MYO19	-35096,-101753
chr16:1384670-1385580	chr16	+	1384739	1385575	True	NM_001001410,NM_001199098,NM_001199099,NM_003933,NM_001199097,NM_001199096	chr16,chr16,chr16,chr16,chr16,chr16	-,+,+,+,+,+	C16orf42,BAIAP3,BAIAP3,BAIAP3,BAIAP3,BAIAP3	16348,-1184,-1184,-285,-1184,622
chr19:14018256-14018909	chr19	+	14018535	14018787	True	NM_017721,NM_024323	chr19,chr19	+,-	CC2D1A,C19orf57	-1630,-1626
chr9:13986439-13988093	chr9	+	13986480	13987844	True	NR_003920,NM_001190737	chr9,chr9	+,-	LOC389705,NFIB	1005480,326251
chr10:18949455-18949936	chr10	+	18949485	18949764	True	NM_178815,NM_182543	chr10,chr10	+,-	ARL5B,NSUN6	-1227,-8935
chr18:3384187-3384716	chr18	+	3384527	3384735	True	NM_019856,NM_174886	chr18,chr18	-,+	MYOM1,TGIF1	-164421,27336
chr1:111770109-111772024	chr1	+	111770261	111771979	True	NM_001025199,NM_004000,NM_024901,NM_001025197	chr1,chr1,chr1,chr1	+,+,-,+	CHI3L2,CHI3L2,DENND2D,CHI3L2	353,-31,-26980,-31
chr16:85588609-85588975	chr16	+	85588633	85588999	True	NM_001134473,NM_016095	chr16,chr16	+,-	KIAA0182,GINS2	56029,133639
chr3:123165604-123166235	chr3	+	123165621	123166205	True	NM_012430,NM_183357	chr3,chr3	+,-	SEC22A,ADCY5	-244898,1237
chr19:53449206-53449835	chr19	+	53449310	53449678	True	NM_152473,NR_037805	chr19,chr19	+,-	HERV-V1,ZNF321	67665,-3463
chr18:30351667-30351893	chr18	+	30351670	30351942	True	NR_003558,NM_020805	chr18,chr18	+,-	WBP11P1,KLHL14	-260095,1082
chr11:62444435-62445445	chr11	+	62444489	62445247	True	NM_015853,NM_001085372,NM_024099	chr11,chr11,chr11	-,+,-	UBXN1,C11orf83,C11orf48	1330,-5414,-5248
chr19:37958559-37958860	chr19	+	37958605	37958887	True	NM_144694,NM_152484	chr19,chr19	+,-	ZNF570,ZNF569	1094,-266
chr12:80297153-80297917	chr12	+	80297401	80297740	True	NM_001143886,NM_173591	chr12,chr12	-,+	PPP1R12A,OTOGL	10014,305492
chr22:20752414-20754036	chr22	+	20752628	20753672	True	NM_153334,NR_003253,NM_003426	chr22,chr22,chr22	-,+,+	SCARF2,ZNF74,ZNF74	38537,-4199,-4199
chr10:120862309-120863508	chr10	+	120862370	120863261	True	NM_207009,NR_027141,NM_003750	chr10,chr10,chr10	+,+,-	FAM45A,FAM45B,EIF3A	349,367,-22036
chr12:93321583-93322291	chr12	+	93321752	93322260	True	NM_001004330,NM_003566	chr12,chr12	+,-	PLEKHG7,EEA1	-191538,897
chr5:173165961-173167080	chr5	+	173166455	173167016	True	NM_030627,NM_138369	chr5,chr5	+,-	CPEB4,BOD1	148314,-122789
chr17:76779100-76779697	chr17	+	76779311	76779533	True	NM_017456,NM_030968,NM_004762	chr17,chr17,chr17	-,+,-	CYTH1,C1QTNF1,CYTH1	-935,240717,-935
chr6:167278397-167278982	chr6	+	167278400	167278752	True	NM_007045,NM_001006932	chr6,chr6	+,-	FGFR1OP,RPS6KA2	134063,-2629
chr14:31677114-31677569	chr14	+	31677135	31677617	True	NM_015382,NM_001128126	chr14,chr14	-,+	HECTD1,AP4S1	-446,-182503
chr12:88409826-88410443	chr12	+	88409847	88410471	True	NM_152589,NM_001009894	chr12,chr12	-,+	C12orf50,C12orf29	12755,18796
chr19:40791656-40792009	chr19	+	40791801	40792011	True	NM_001031696,NR_030371,NM_001626	chr19,chr19,chr19	+,-,-	PLD3,MIR641,AKT2	62320,-3253,-536
chr5:99388820-99389861	chr5	+	99388820	99389836	True	NM_198507,NR_027503	chr5,chr5	+,-	FAM174A,LOC100133050	481287,334184
chr19:14798966-14799360	chr19	+	14798965	14799040	True	NM_032433,NM_032571	chr19,chr19	+,-	ZNF333,EMR3	1829,-13235
chr2:11272422-11272639	chr2	+	11272498	11272658	True	NM_182500,NM_004850	chr2,chr2	+,-	C2orf50,ROCK2	520,212103
chr16:3350970-3352218	chr16	+	3350998	3352129	True	NM_153028,NM_033208	chr16,chr16	+,-	ZNF75A,TIGD7	3303,3362
chr3:47518298-47518607	chr3	+	47518326	47518616	True	NM_012235,NM_015466	chr3,chr3	-,+	SCAP,PTPN23	-881,-95886
chr20:21495837-21496150	chr20	+	21496008	21496142	True	NM_002509,NM_006192	chr20,chr20	-,+	NKX2-2,PAX1	-1344,190154
chr2:121010907-121011153	chr2	+	121010940	121011194	True	NM_002881,NR_000034	chr2,chr2	+,-	RALB,TMEM185B	-577,-29956
chr22:35796334-35796615	chr22	+	35796420	35796592	True	NM_005368,NM_006739	chr22,chr22	-,+	MB,MCM5	216842,-355
chr15:30685965-30686318	chr15	+	30686006	30686068	True	NM_148911,NM_139320,NR_026858	chr15,chr15,chr15	-,-,+	CHRFAM7A,CHRFAM7A,FAM7A1	-142,-142,178689
chr15:30685965-30686318	chr15	-	30864605	30864667	False	NR_027470,NM_148911,NR_026858	chr15,chr15,chr15	+,-,+	FAM7A2,CHRFAM7A,FAM7A1	90,-178741,90
chr15:30685965-30686318	chr15	+	32727340	32727402	False	NR_027470,NR_026859,NR_026858,NM_199357	chr15,chr15,chr15,chr15	-,-,-,+	FAM7A2,FAM7A3,FAM7A1,ARHGAP11A	-90,-275,-90,180288
chr12:122239486-122241012	chr12	+	122239495	122240911	True	NM_015048,NM_019034,NR_002809	chr12,chr12,chr12	+,-,-	SETD1B,RHOF,LOC338799	1726,-7901,529
chr11:33744821-33745773	chr11	+	33744829	33745821	True	NM_001127223,NM_001127227,NM_001127226,NM_001127225,NM_012194	chr11,chr11,chr11,chr11,chr11	-,-,-,-,+	CD59,CD59,CD59,CD59,C11orf41	-556,-331,-556,-556,-181003
chr9:33447741-33449360	chr9	+	33447978	33449352	True	NM_004925,NM_002504	chr9,chr9	-,+	AQP3,NFX1	-388,-157611
chr6:99873905-99874646	chr6	+	99873975	99874626	True	NM_032870,NM_015491,NM_001195131	chr6,chr6,chr6	-,-,+	SFRS18,SFRS18,LOC100130890	-768,-768,94243
chr22:19434158-19434563	chr22	+	19434158	19434508	True	NM_001166242,NM_173793,NM_003776	chr22,chr22,chr22	-,-,+	C22orf39,C22orf39,MRPL40	1297,1297,-14173
chr1:147247087-147247969	chr1	+	147247210	147247966	True	NM_005266,NM_005267	chr1,chr1	-,+	GJA5,GJA8	-1726,126979
chr13:41055725-41056515	chr13	+	41055828	41056462	True	NR_024505,NR_024507,NR_024506,NM_014252	chr13,chr13,chr13,chr13	-,-,-,+	LOC646982,LOC646982,LOC646982,SLC25A15	-685,-685,-685,307084
chr1:2037630-2038137	chr1	+	2037665	2037784	True	NR_024445,NM_001033582	chr1,chr1	-,+	LOC100128003,PRKCZ	87291,-1561
chr3:49836406-49837205	chr3	+	49836435	49837175	True	NM_001007540,NM_203370	chr3,chr3	-,+	CDHR4,C3orf54	129,3511
chr9:86154368-86155019	chr9	+	86154400	86155060	True	NM_174938,NM_001001551	chr9,chr9	-,+	FRMD3,C9orf103	-1052,82972
chr9:32566022-32566498	chr9	+	32566083	32566483	True	NM_001199987,NM_002493,NR_033992,NM_182739	chr9,chr9,chr9,chr9	-,-,+,-	NDUFB6,NDUFB6,LOC100129250,NDUFB6	6749,6749,-14363,6749
chr1:152768265-152768725	chr1	+	152768279	152768769	True	NM_178353,NM_178352,NM_178351	chr1,chr1,chr1	+,+,-	LCE1E,LCE1D,LCE1C	-9577,457,10388
chr2:10444658-10444978	chr2	+	10444714	10444786	True	NM_134421,NM_002149,NR_036222	chr2,chr2,chr2	+,+,-	HPCAL1,HPCAL1,MIR4261	-941,-1727,-111917
chr3:123688446-123688995	chr3	+	123688578	123688994	True	NR_028136,NM_022757	chr3,chr3	+,-	KALRN,CCDC14	124563,-8323
chr19:52303192-52303422	chr19	+	52303193	52303399	True	NM_002029,NM_002030	chr19,chr19	-,+	FPR1,FPR3	-48043,-4833
chr15:35838157-35838430	chr15	+	35838211	35838475	True	NM_080650,NM_001141972,NR_003144	chr15,chr15,chr15	-,-,+	ATPBD4,ATPBD4,LOC723972	-21,-21,-308735
chr13:41054152-41054581	chr13	+	41054152	41054564	True	NR_024505,NR_024507,NR_024506,NM_014252	chr13,chr13,chr13,chr13	-,-,-,+	LOC646982,LOC646982,LOC646982,SLC25A15	629,629,629,308982
chr8:117747047-117747734	chr8	+	117747223	117747664	True	NM_003756,NM_032334	chr8,chr8	-,+	EIF3H,UTP23	20455,31077
chr1:32671028-32671450	chr1	+	32671037	32671321	True	NM_001160042,NM_018134,NM_001099434,NM_024296,NM_019118	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	IQCC,IQCC,DCDC2B,CCDC28B,TMEM234	-12,-12,3373,-4886,16655
chr21:47607058-47608419	chr21	+	47607083	47608239	True	NR_002776,NM_001142854,NM_032261	chr21,chr21,chr21	+,-,-	MCM3AP-AS1,C21orf56,C21orf56	40918,-2710,-2710
chr19:11464171-11465369	chr19	+	11464203	11465212	True	NM_001170635,NM_001080503,NM_022737,NM_198536,NM_001145416,NM_033408	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,-,-,-	LPPR2,CCDC159,LPPR2,TMEM205,TMEM205,TMEM205	849,-7073,849,-7222,-7222,-7222
chr22:29875716-29875951	chr22	+	29875748	29875956	True	NR_002727,NM_021076	chr22,chr22	-,+	RFPL1S,NEFH	-37630,224
chr21:26734636-26735556	chr21	+	26735244	26735603	True	NR_024027,NR_001458	chr21,chr21	-,+	NCRNA00158,MIR155HG	68469,198853
chr1:47066880-47067803	chr1	+	47066922	47067792	True	NM_198973,NM_001145474,NM_003684,NR_024174,NM_001135553,NR_024176	chr1,chr1,chr1,chr1,chr1,chr1	-,+,-,-,-,-	MKNK1,C1orf223,MKNK1,MKNK1,MKNK1,MKNK1	2224,69707,2224,2224,2224,2224
chr19:37825271-37825554	chr19	+	37825283	37825563	True	NM_181786,NR_029390	chr19,chr19	+,-	HKR1,LOC284412	16,-65371
chr15:43208822-43210420	chr15	+	43208955	43210260	True	NM_024956,NM_173500	chr15,chr15	+,-	TMEM62,TTBK2	215461,2808
chrX:48165356-48165661	chrX	+	48165356	48165417	True	NM_021014,NM_005635	chrX,chrX	-,+	SSX3,SSX1	50776,-50610
chrX:48165356-48165661	chrX	+	52683576	52683637	False	NR_027250,NM_173358	chrX,chrX	+,-	SSX8,SSX7	-31642,364
chr8:21948558-21949810	chr8	+	21948636	21949577	True	NM_024815,NM_022749	chr8,chr8	-,+	NUDT18,FAM160B2	17405,-1973
chr22:40256483-40257829	chr22	+	40256482	40257838	True	NM_004810,NM_152512	chr22,chr22	+,-	GRAP2,ENTHD1	39247,32008
chrX:47972163-47973297	chrX	+	47972224	47972977	True	NM_001205103,NR_028366,NR_033730	chrX,chrX,chrX	+,+,-	LOC100509575,SSX6,ZNF630	-4906,-4916,-41199
chrX:47972163-47973297	chrX	+	52656935	52657003	False	NR_027250,NM_173358	chrX,chrX	+,-	SSX8,SSX7	-5019,27015
chr2:133427306-133427509	chr2	+	133427433	133427517	True	NM_001077427,NM_001508,NM_144586	chr2,chr2,chr2	-,+,-	LYPD1,GPR39,LYPD1	1603,-253337,1014
chr7:37908352-37908578	chr7	+	37908351	37908628	True	NM_003014,NM_016616	chr7,chr7	-,+	SFRP4,TXNDC3	47948,-20206
chr16:14728087-14729779	chr16	+	14728254	14729507	True	NM_016561,NM_002582,NM_001134477	chr16,chr16,chr16	+,-,-	BFAR,PARN,PARN	-1637,-4130,-4134
chr21:34776413-34776685	chr21	+	34776503	34776651	True	NM_005534,NM_006134	chr21,chr21	+,-	IFNGR2,TMEM50B	-1352,75680
chr7:1785861-1786072	chr7	+	1785870	1786100	True	NM_001134340,NM_001128636	chr7,chr7	-,+	PSMG3,ELFN1	-176202,-37123
chr8:81213721-81214655	chr8	+	81213862	81214320	True	NM_005079,NM_001105539	chr8,chr8	-,+	TPD52,ZBTB10	-130026,184127
chr12:54758362-54759294	chr12	+	54758370	54759012	True	NR_029894,NM_020370	chr12,chr12	+,-	MIR148B,GPR84	-27421,-100
chrX:119442366-119442960	chrX	+	119442367	119442957	True	NM_001104545,NM_001104544,NM_001142447,NM_017938	chrX,chrX,chrX,chrX	-,-,+,-	FAM70A,FAM70A,ATP1B4,FAM70A	2484,2484,52982,2484
chrX:31089938-31090180	chrX	+	31089942	31090190	True	NM_203391,NM_031894	chrX,chrX	+,-	GK,FTHL17	-418517,30
chr19:58864284-58864614	chr19	+	58864329	58864563	True	NM_198458,NM_130786,NR_015380	chr19,chr19,chr19	-,-,+	ZNF497,A1BG,A1BG-AS1	9607,352,-1044
chr17:2242243-2242924	chr17	+	2242359	2242459	True	NR_003072,NR_003073,NM_014853,NM_018128,NM_001098509	chr17,chr17,chr17,chr17,chr17	-,-,+,-,+	SNORD91A,SNORD91B,SGSM2,TSR1,SGSM2	-8695,-9855,-1605,-1681,-1603
chr21:44781232-44781449	chr21	+	44781252	44781441	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	88462,65612
chr8:29953544-29955110	chr8	+	29953579	29954872	True	NM_001128208,NM_016127,NM_015344	chr8,chr8,chr8	+,-,+	LEPROTL1,TMEM66,LEPROTL1	-708,-12930,-708
chr13:96747798-96749657	chr13	+	96747995	96749539	True	NM_153456,NM_020121	chr13,chr13	+,-	HS6ST3,UGGT2	-4953,-42259
chr22:50626331-50626896	chr22	+	50626808	50626944	True	NM_025204,NM_020461	chr22,chr22	+,-	TRABD,TUBGCP6	-2499,56506
chr7:50861652-50862836	chr7	+	50861734	50862868	True	NM_001001555,NR_033845	chr7,chr7	-,+	GRB10,LOC100129427	-575,-262328
chr19:58221154-58221763	chr19	+	58221372	58221788	True	NM_001085384,NM_138347	chr19,chr19	-,+	ZNF154,ZNF551	-793,-28066
chr13:74707685-74708076	chr13	+	74707716	74708066	True	NR_034024,NM_007249	chr13,chr13	+,-	LOC338864,KLF12	418913,50
chr17:10102694-10103136	chr17	+	10102705	10102909	True	NM_201433,NM_004246	chr17,chr17	-,+	GAS7,GLP2R	-837,-373375
chr4:154711853-154712099	chr4	+	154711884	154712052	True	NM_003264,NM_003013	chr4,chr4	+,-	TLR2,SFRP2	-106494,-1656
chr9:35674188-35675078	chr9	+	35674215	35674979	True	NM_032818,NM_001216	chr9,chr9	-,+	C9orf100,CA9	-8937,-351
chr19:50016742-50017004	chr19	+	50016832	50016892	True	NM_004107,NM_001136019,NR_029703	chr19,chr19,chr19	+,+,-	FCGRT,FCGRT,MIR150	-447,-1347,-12707
chr7:39053049-39053251	chr7	+	39053176	39053315	True	NM_007252,NM_080631	chr7,chr7	+,-	POU6F2,VPS41	-35628,-104376
chr17:34209802-34210998	chr17	+	34210305	34210766	True	NM_002985,NM_003487	chr17,chr17	-,+	CCL5,TAF15	-2928,-73876
chr5:35629552-35630652	chr5	+	35629552	35630136	True	NM_024867,NM_001042625	chr5,chr5	+,-	SPEF2,CAPSL	-11617,308651
chr7:100082129-100082855	chr7	+	100082172	100082782	True	NM_173564,NM_030935	chr7,chr7	+,-	C7orf51,TSC22D4	-673,-5270
chr15:73917965-73919295	chr15	+	73918239	73919299	True	NM_017455,NM_001161363,NM_001161364,NM_012428,NM_001024736	chr15,chr15,chr15,chr15,chr15	-,-,-,-,+	NPTN,NPTN,NPTN,NPTN,CD276	6513,6513,6513,6513,57322
chr4:88315019-88315457	chr4	+	88315212	88315462	True	NM_024047,NM_016245	chr4,chr4	+,-	NUDT9,HSD17B11	28272,-2757
chr2:85808085-85809012	chr2	+	85808110	85808790	True	NM_003761,NM_001142269,NM_006634	chr2,chr2,chr2	+,-,+	VAMP8,GGCX,VAMP5	-3554,-19453,2740
chr1:87598461-87599928	chr1	+	87598591	87599890	True	NR_026989,NR_026988,NR_026987,NR_026986,NR_026985,NM_203341	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-	LOC339524,LOC339524,LOC339524,LOC339524,LOC339524,SEP15	-3194,-3194,-1033,-1033,-1033,-218484
chr3:132441105-132441346	chr3	+	132441194	132441264	True	NR_002811,NR_037804,NM_153240	chr3,chr3,chr3	+,-,-	NCRNA00119,NPHP3-ACAD11,NPHP3	-59,89,89
chr15:37389477-37389898	chr15	+	37389644	37389877	True	NM_170674,NM_170675,NM_170676,NM_170677,NM_172315,NM_172316,NM_002399,NM_032499	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,-,-,-,-,-,+	MEIS2,MEIS2,MEIS2,MEIS2,MEIS2,MEIS2,MEIS2,C15orf41	2877,2877,2877,2877,676,1770,3673,-456889
chr4:86953574-86954406	chr4	+	86953779	86954421	True	NM_031305,NM_138981	chr4,chr4	+,-	ARHGAP24,MAPK10	-102404,74435
chr19:42893356-42894531	chr19	+	42893638	42894304	True	NM_032488,NM_001410	chr19,chr19	-,+	CNFN,MEGF8	190,-63928
chr7:56159590-56160056	chr7	+	56159592	56159796	True	NM_015411,NM_006213	chr7,chr7	+,-	SUMF2,PHKG1	-27726,943
chr2:174632179-174632819	chr2	+	174632240	174632688	True	NM_145810,NM_001017371	chr2,chr2	+,-	CDCA7,SP3	-412730,196313
chr8:92048207-92048476	chr8	+	92048274	92048513	True	NM_016023,NM_018710	chr8,chr8	+,-	OTUD6B,TMEM55A	33910,4741
chr13:113863198-113863446	chr13	+	113863279	113863445	True	NM_003589,NM_001127202,NM_001127203,NM_001008895,NM_018386	chr13,chr13,chr13,chr13,chr13	+,-,-,+,-	CUL4A,PCID2,PCID2,CUL4A,PCID2	-244,-250,-250,485,-250
chr9:14993762-14994526	chr9	+	14993938	14994534	True	NR_003920,NM_144966	chr9,chr9	+,-	LOC389705,FREM1	-664,-82945
chr5:112256769-112257191	chr5	+	112256847	112257131	True	NM_005669,NM_152624	chr5,chr5	-,+	REEP5,DCP2	950,55301
chr7:45808826-45809273	chr7	+	45808866	45809158	True	NR_024271,NM_000596	chr7,chr7	-,+	SEPT7P2,IGFBP1	-249,118800
chr12:18418870-18419507	chr12	+	18419023	18419555	True	NM_004570,NM_024730	chr12,chr12	+,-	PIK3C2G,RERGL	-4614,-175909
chr22:25757407-25757694	chr22	+	25757407	25757473	True	NR_029395,NM_182492	chr22,chr22	+,-	IGLL3P,LRP5L	-43234,1101
chr14:97260005-97260928	chr14	+	97260045	97260695	True	NM_003384,NM_018036	chr14,chr14	+,-	VRK1,ATG2B	2988,-430367
chr16:100681-101348	chr16	+	101188	101348	True	NM_016310,NM_024571	chr16,chr16	-,+	POLR3K,SNRNP25	2334,2480
chrY:23968880-23969351	chrY	+	23968966	23969286	True	NM_001006120,NM_001006118	chrY,chrY	+,-	RBMY1D,RBMY1E	-272212,71397
chr12:54379442-54379831	chr12	+	54379475	54379813	True	NR_029617,NR_003716,NM_017409	chr12,chr12,chr12	+,-,+	MIR196A2,HOTAIR,HOXC10	5708,-16960,-580
chr1:11536915-11537356	chr1	+	11536967	11537391	True	NM_012168,NM_020780	chr1,chr1	-,+	FBXO2,PTCHD2	177547,1903
chr9:80853521-80853827	chr9	+	80853543	80853695	True	NM_001098802,NM_002072,NM_032171	chr9,chr9,chr9	+,-,+	CEP78,GNAQ,CEP78	-2603,-207324,-2603
chr8:74909385-74911364	chr8	+	74909531	74911020	True	NM_005648,NM_015364,NM_001195797	chr8,chr8,chr8	-,+,+	TCEB1,LY96,LY96	-25009,-6026,-6026
chr10:13342220-13342699	chr10	+	13342590	13342692	True	NM_006214,NM_001037537,NM_182751	chr10,chr10,chr10	-,-,+	PHYH,PHYH,MCM10	-460,-844,-139087
chrX:119712438-119713284	chrX	+	119712657	119712910	True	NM_014060,NM_003588	chrX,chrX	+,-	MCTS1,CUL4B	24833,-2973
chr7:103617825-103619739	chr7	+	103617840	103619710	True	NM_005045,NM_199000	chr7,chr7	-,+	RELN,LHFPL3	10305,349393
chr19:39617101-39617328	chr19	+	39617158	39617338	True	NM_001014832,NM_001014831,NM_001014835,NM_001014834,NM_005884,NM_001080468	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,-	PAK4,PAK4,PAK4,PAK4,PAK4,SYCN	-795,-795,-795,-795,-795,77618
chr21:42208942-42209517	chr21	+	42208979	42209559	True	NM_001389,NR_036167	chr21,chr21	-,+	DSCAM,MIR3197	9530,329924
chr6:20531271-20532327	chr6	+	20531271	20532374	True	NM_017774,NM_001080480	chr6,chr6	+,-	CDKAL1,MBOAT1	2313,-318601
chr4:128563735-128565124	chr4	+	128563827	128565120	True	NM_152778,NM_015693	chr4,chr4	-,+	MFSD8,INTU	322069,-9795
chr1:31229878-31230096	chr1	+	31229877	31230133	True	NM_006762,NR_034182	chr1,chr1	-,+	LAPTM5,LOC100129196	600,-38309
chr21:34099182-34099544	chr21	+	34099186	34099571	True	NM_003895,NM_203446,NM_001160306,NR_024622,NM_001160302	chr21,chr21,chr21,chr21,chr21	-,-,-,+,-	SYNJ1,SYNJ1,SYNJ1,C21orf49,SYNJ1	831,831,730,44839,730
chr2:74686126-74687155	chr2	+	74686353	74687191	True	NM_001146158,NM_006302,NM_031288,NM_012477,NR_037849	chr2,chr2,chr2,chr2,chr2	-,-,+,+,+	MOGS,MOGS,INO80B,WBP1,INO80B-WBP1	5396,5396,-4254,-877,-4254
chr10:121574536-121575343	chr10	+	121574738	121575384	True	NM_024834,NR_003252	chr10,chr10	-,+	MCMBP,INPP5F	57060,3401
chr5:179783244-179783497	chr5	+	179783290	179783542	True	NM_005110,NM_015455	chr5,chr5	-,+	GFPT2,CNOT6	-2975,137874
chr19:1751798-1752026	chr19	+	1751836	1751910	True	NM_001178002,NM_001080488	chr19,chr19	-,+	ATP8B3,ONECUT3	60339,1751
chr2:101035302-101036032	chr2	+	101035616	101035793	True	NM_004854,NM_001011717	chr2,chr2	-,+	CHST10,NMS	-1486,51150
chr2:220091264-220092434	chr2	+	220091452	220092365	True	NM_024085,NM_001077198,NM_018089,NM_001042410,NM_005689	chr2,chr2,chr2,chr2,chr2	-,-,+,+,-	ATG9A,ATG9A,ANKZF1,ANKZF1,ABCB6	2053,2053,2113,2244,-7740
chr2:30368526-30369746	chr2	+	30368652	30369400	True	NM_004304,NM_001127399,NM_016061,NM_001127401,NM_001127400	chr2,chr2,chr2,chr2,chr2	-,+,+,+,+	ALK,YPEL5,YPEL5,YPEL5,YPEL5	-224175,349,349,349,349
chr14:105543599-105544025	chr14	+	105543697	105543959	True	NM_174891,NM_013345	chr14,chr14	+,-	C14orf79,GPR132	-91132,-11943
chr5:695249-695468	chr5	+	695323	695385	True	NM_018140,NM_007030	chr5,chr5	+,-	CEP72,TPPP	-82969,-1813
chr5:695249-695468	chr5	+	786655	786717	False	NM_001166260,NM_024786	chr5,chr5	+,-	TRIP13,ZDHHC11	106251,64434
chr19:48020568-48021383	chr19	+	48020898	48021180	True	NM_015711,NM_003827	chr19,chr19	+,-	GLTSCR1,NAPA	90272,-2401
chr13:51797069-51797287	chr13	+	51797120	51797204	True	NR_003923,NM_145019	chr13,chr13	-,+	GUCY1B2,FAM124A	-156827,-664
chr1:155112045-155112567	chr1	+	155112144	155112551	True	NM_018973,NM_153741,NM_018845,NM_001122839,NM_001122837	chr1,chr1,chr1,chr1,chr1	-,-,+,+,+	DPM3,DPM3,SLC50A1,SLC50A1,SLC50A1	382,495,-3914,-3914,-3914
chr5:78378133-78378746	chr5	+	78378137	78378723	True	NM_017614,NM_013391	chr5,chr5	+,-	BHMT2,DMGDH	-12650,-12688
chr11:126174288-126176240	chr11	+	126174479	126175777	True	NM_014026,NM_003139	chr11,chr11	+,-	DCPS,SRPR	-884,-35602
chr4:39101242-39103187	chr4	+	39101280	39103181	True	NM_199039,NM_024943	chr4,chr4	+,-	KLHL5,TMEM156	-37479,-67239
chrX:15285586-15286173	chrX	+	15285935	15286182	True	NM_024087,NM_203281,NM_001031739,NM_001168530,NM_001168531	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	ASB9,BMX,ASB9,ASB9,ASB9	2161,232717,2161,2161,2457
chr20:21095019-21095406	chr20	+	21095172	21095426	True	NM_033176,NM_001163022	chr20,chr20	-,+	NKX2-4,PLK1S1	282671,11197
chr4:100870402-100870826	chr4	+	100870403	100870825	True	NM_001031723,NM_002106,NR_002799	chr4,chr4,chr4	-,-,+	DNAJB14,H2AFZ,LOC256880	-2524,737,810
chrX:134865562-134865878	chrX	+	134865707	134865770	True	NM_152582,NM_001017436	chrX,chrX	+,+	CT45A2,CT45A4	443,443
chrX:134865562-134865878	chrX	+	134882982	134883045	False	NM_001017436,NM_001017435	chrX,chrX	-,+	CT45A4,CT45A3	53741,442
chrX:134865562-134865878	chrX	-	134937178	134937241	False	NM_018666,NM_001017436	chrX,chrX	+,-	SAGE1,CT45A4	38543,-443
chrX:134865562-134865878	chrX	-	134954433	134954496	False	NM_001007551,NM_018666,NM_001172288	chrX,chrX,chrX	-,+,-	CT45A5,SAGE1,CT45A5	-439,21288,-439
chr10:18428512-18428977	chr10	+	18428778	18429008	True	NM_201593,NM_201596,NM_201597,NM_001167945,NM_201572,NM_201571,NM_182543	chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,+,-	CACNB2,CACNB2,CACNB2,CACNB2,CACNB2,CACNB2,NSUN6	597,597,597,733,733,733,511592
chr7:141434614-141435488	chr7	+	141434619	141434945	True	NM_003143,NR_015392	chr7,chr7	+,-	SSBP1,FLJ40852	3230,3135
chr10:97412208-97414012	chr10	+	97412547	97413924	True	NM_001098175,NM_001017423,NM_002860	chr10,chr10,chr10	+,-,-	ENTPD1,ALDH18A1,ALDH18A1	57611,2700,2700
chr3:54155882-54156112	chr3	+	54155881	54156029	True	NM_018398,NM_021237	chr3,chr3	+,-	CACNA2D3,SELK	663,-229892
chr12:57471135-57471585	chr12	+	57471335	57471525	True	NM_001130963,NM_005967,NM_015257	chr12,chr12,chr12	-,+,-	TMEM194A,NAB2,TMEM194A	1111,11151,1111
chr12:133067572-133068394	chr12	+	133067791	133068041	True	NM_001142641,NM_001195520	chr12,chr12	+,-	FBRSL1,LOC645277	-685,119046
chr1:35220752-35220956	chr1	+	35220770	35220926	True	NM_001164824,NM_153212,NM_005268	chr1,chr1,chr1	-,+,+	C1orf212,GJB4,GJB5	103770,4415,-100
chr11:73018896-73019243	chr11	+	73018902	73019230	True	NM_014824,NM_014786	chr11,chr11	-,+	FCHSD2,ARHGEF17	-165759,432
chr2:98964689-98965326	chr2	+	98964743	98965341	True	NM_001008215,NM_001298,NM_001079878	chr2,chr2,chr2	-,+,+	C2orf64,CNGA3,CNGA3	259664,-2176,-2176
chr9:140472489-140472707	chr9	+	140472520	140472584	True	NM_032477,NM_138778	chr9,chr9	+,-	MRPL41,WDR85	-26262,853
chr10:71562922-71563849	chr10	+	71563121	71563677	True	NM_080802,NM_080800,NM_001130103,NM_080801,NM_080798,NM_020999,NM_080805	chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,-,+	COL13A1,COL13A1,COL13A1,COL13A1,COL13A1,NEUROG3,COL13A1	-1538,-1538,-1538,-1538,-1538,-229911,-1538
chr7:65583714-65584896	chr7	+	65583820	65584751	True	NR_024548,NM_001040647,NM_014478,NM_001040648,NM_001142414,NM_000181	chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,+,-	CRCP,CRCP,CRCP,CRCP,CRCP,GUSB	-4066,-4066,-4066,-4066,-4066,-136519
chr7:148394798-148395338	chr7	+	148394804	148395224	True	NM_003592,NM_001203249	chr7,chr7	+,-	CUL1,EZH2	708,185428
chr5:147581884-147582380	chr5	+	147582168	147582430	True	NM_001195290,NM_206966,NM_205841	chr5,chr5,chr5	+,-,+	SPINK6,C5orf46,SPINK6	-27,-296067,-27
chr5:57755626-57755846	chr5	+	57755690	57755874	True	NM_006622,NM_152687	chr5,chr5	-,+	PLK2,GAPT	89,31455
chr20:50176323-50177569	chr20	+	50176322	50177598	True	NM_014484,NM_001136021	chr20,chr20	+,-	MOCS3,NFATC2	-601010,1622
chr14:77734838-77736270	chr14	+	77735098	77736248	True	NM_021257,NR_031661	chr14,chr14	-,+	NGB,MIR1260	1462,-2588
chr10:43954106-43954808	chr10	+	43954105	43954537	True	NR_026693,NM_001098204	chr10,chr10	+,-	ZNF487P,HNRNPF	-21582,-49409
chr16:71881980-71882415	chr16	+	71881979	71882443	True	NM_001201553,NM_001137675,NR_024612	chr16,chr16,chr16	-,+,+	ZNF821,ATXN1L,ATXN1L	35051,-2137,-2137
chr12:125399209-125399423	chr12	+	125399252	125399472	True	NM_021009,NM_080626	chr12,chr12	-,+	UBC,BRI3BP	165,78721
chr14:35004931-35005403	chr14	+	35005129	35005447	True	NM_018453,NR_002937	chr14,chr14	-,+	EAPP,C14orf19	3552,403680
chr5:124078286-124079868	chr5	+	124078719	124079787	True	NM_004384,NM_020747	chr5,chr5	+,-	CSNK1G3,ZNF608	-1230977,1068
chr21:31747425-31747717	chr21	+	31747466	31747744	True	NR_036221,NM_181599,NM_181621	chr21,chr21,chr21	-,+,-	MIR4327,KRTAP13-1,KRTAP13-2	2,20647,-2909
chr5:156483684-156485294	chr5	+	156484559	156485271	True	NM_001099414,NM_012206,NM_001173393,NM_005546	chr5,chr5,chr5,chr5	-,-,-,+	HAVCR1,HAVCR1,HAVCR1,ITK	266,266,749,122635
chr11:122485130-122485488	chr11	+	122485205	122485403	True	NM_032873,NM_001098169	chr11,chr11	+,-	UBASH3B,BSX	40994,367026
chr3:42728611-42728846	chr3	+	42728617	42728881	True	NM_152393,NR_027753	chr3,chr3	+,-	KBTBD5,HHATL	-1657,14182
chr2:102924011-102925704	chr2	+	102924339	102925355	True	NM_016232,NM_032718	chr2,chr2	+,-	IL1RL1,MFSD9	2606,428032
chr11:71818167-71818860	chr11	+	71818400	71818802	True	NM_014042,NR_026886,NM_017907	chr11,chr11,chr11	-,+,-	C11orf51,LRTOMT,LAMTOR1	5070,-26758,-3967
chr15:101835317-101835544	chr15	+	101835405	101835545	True	NM_024652,NM_003090	chr15,chr15	+,-	LRRK1,SNRPA1	-375996,-9
chr7:141616503-141618350	chr7	+	141616543	141618321	True	NM_013252,NM_001001656	chr7,chr7	-,+	CLEC5A,OR9A4	28512,354
chr19:17336747-17337065	chr19	+	17336885	17337099	True	NM_005234,NM_024578	chr19,chr19	-,+	NR2F6,OCEL1	19102,-45
chr10:31626905-31628620	chr10	+	31626905	31628352	True	NM_001174094,NR_024284	chr10,chr10	+,-	ZEB1,LOC220930	-16899,-18881
chr15:25226504-25226742	chr15	+	25226708	25226801	True	NR_022008,NR_022011,NM_130838,NR_001292,NR_001293,NR_001294	chr15,chr15,chr15,chr15,chr15,chr15	+,+,-,+,+,+	PAR5,PAR-SN,UBE3A,SNORD108,SNORD107,SNORD64	3205,339,423913,5270,339,3445
chr12:12508176-12509042	chr12	+	12508177	12508809	True	NM_058169,NM_018050,NR_024061	chr12,chr12,chr12	+,-,-	LOH12CR1,MANSC1,LOH12CR2	1210,-5008,1242
chr1:154834014-154834240	chr1	+	154834159	154834287	True	NM_001826,NM_001204087,NM_002249,NM_170782	chr1,chr1,chr1,chr1	+,-,-,-	CKS1B,KCNN3,KCNN3,KCNN3	112830,8517,8517,-1821
chr9:130359059-130359970	chr9	+	130359591	130359771	True	NM_001032221,NM_001035534	chr9,chr9	+,-	STXBP1,FAM129B	14714,-18323
chr17:48543078-48543538	chr17	+	48543145	48543408	True	NM_018346,NM_001267	chr17,chr17	+,-	RSAD1,CHAD	12781,2874
chr6:136560718-136561949	chr6	+	136560766	136561841	True	NM_001099286,NM_018945,NM_138419	chr6,chr6,chr6	-,+,-	FAM54A,PDE7B,FAM54A	9669,-387983,9669
chr16:5010283-5010992	chr16	+	5010291	5010941	True	NM_014692,NM_002705	chr16,chr16	+,-	SEC14L5,PPL	-2033,-23155
chr1:111432245-111433043	chr1	+	111432291	111432780	True	NM_000560,NM_001006945	chr1,chr1	+,-	CD53,C1orf103	-16622,73837
chr20:61494252-61494817	chr20	+	61494251	61494495	True	NM_006602,NM_080750	chr20,chr20	-,+	TCFL5,DPH3P1	-1136,-17833
chr1:247067062-247068721	chr1	+	247067227	247068317	True	NR_015422,NM_015446	chr1,chr1	+,-	LOC149134,AHCTF1	-114369,26460
chr4:88140182-88140889	chr4	+	88140426	88140911	True	NM_020803,NM_024047	chr4,chr4	-,+	KLHL8,NUDT9	813,202823
chr5:175962958-175963209	chr5	+	175963016	175963256	True	NM_001171976,NM_014901	chr5,chr5	+,-	CDHR2,RNF44	6255,1215
chrX:70443598-70443979	chrX	+	70443599	70444015	True	NM_000166,NM_001097642,NM_201599	chrX,chrX,chrX	+,+,-	GJB1,GJB1,ZMYM3	-594,-8588,30073
chr1:20880671-20880919	chr1	+	20880696	20880924	True	NM_024544,NM_207334	chr1,chr1	-,+	MUL1,FAM43B	-46022,-1815
chr2:154810087-154810903	chr2	+	154810120	154810912	True	NM_019845,NM_052917	chr2,chr2	-,+	RPRM,GALNT13	-474798,-81753
chrX:106164368-106166117	chrX	+	106164557	106165993	True	NM_001171095,NM_138382,NM_020384	chrX,chrX,chrX	+,-,+	CLDN2,RIPPLY1,CLDN2	-3018,-17996,-1002
chr14:31916746-31918258	chr14	+	31917105	31917973	True	NM_080664,NM_025152	chr14,chr14	-,+	C14orf126,NUBPL	8763,112617
chr16:88868750-88869041	chr16	+	88868843	88868907	True	NM_000485,NM_001030018,NM_030928	chr16,chr16,chr16	-,-,+	APRT,APRT,CDT1	9485,9485,1278
chr1:62190027-62190670	chr1	+	62190189	62190667	True	NM_176877,NM_032027	chr1,chr1	+,-	INADL,TM2D1	17481,478
chrX:110923726-110924302	chrX	+	110924003	110924151	True	NM_001168385,NR_033132,NM_018466,NR_033134,NR_033127,NM_001039210,NR_033125,NR_033124,NM_001099922,NR_033129,NR_033128,NM_178153,NR_033131	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,+,+,+,+,+,+,-,+	ALG13,ALG13,ALG13,ALG13,ALG13,ALG13,ALG13,ALG13,ALG13,ALG13,ALG13,DCX,ALG13	194,733,194,246,246,194,194,194,194,246,246,-268543,246
chr1:120378784-120380579	chr1	+	120378869	120380154	True	NM_006623,NM_001047980	chr1,chr1	+,-	PHGDH,NBPF7	-124502,7682
chr5:137549535-137549860	chr5	+	137549604	137549733	True	NM_005733,NM_004661	chr5,chr5	+,-	KIF20A,CDC23	-35244,-572
chr2:71061143-71062532	chr2	+	71061291	71062428	True	NM_015717,NM_012476	chr2,chr2	-,+	CD207,VAX2	582,65291
chr16:29691570-29692378	chr16	+	29691582	29692360	True	NM_175900,NM_014298	chr16,chr16	-,+	C16orf54,QPRT	65030,-1192
chr1:163144989-163145378	chr1	+	163145021	163145427	True	NM_001195303,NM_001113380	chr1,chr1	-,+	RGS5,RGS4	27248,-103377
chr2:87284650-87285447	chr2	+	87284671	87285243	True	NR_026846,NM_001024457	chr2,chr2	-,+	LOC285074,RGPD1	18349,-139984
chr2:87284650-87285447	chr2	-	86965730	86966302	False	NM_022780,NM_001198954	chr2,chr2	+,-	RMND5A,RNF103-VPS24	-18373,-17485
chr10:103542665-103543053	chr10	+	103542672	103542988	True	NM_006993,NM_033164,NM_033165,NM_033163,NR_036114,NM_006119	chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,+,-	NPM3,FGF8,FGF8,FGF8,MIR3158-1,FGF8	232,-6913,-6913,-6913,-181549,-6913
chr2:42796114-42796397	chr2	+	42796121	42796295	True	NM_172344,NM_020744	chr2,chr2	-,+	KCNG3,MTA3	-74884,-501
chr5:112197862-112199520	chr5	+	112198153	112199354	True	NM_001204199,NM_001204196,NM_001204194,NM_001204193,NM_005669,NM_003135	chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,-,+	SRP19,SRP19,SRP19,SRP19,REEP5,SRP19	-1319,-1319,-1319,-1319,58728,-1319
chr2:219157346-219158414	chr2	+	219157398	219158256	True	NM_015488,NM_022152	chr2,chr2	+,-	PNKD,TMBIM1	-22343,-118
chr3:51929747-51931089	chr3	+	51929758	51930924	True	NM_152397,NM_203424	chr3,chr3	-,+	IQCF1,IQCF2	6512,-34164
chr1:113265806-113266681	chr1	+	113265867	113266587	True	NM_182759,NM_005167,NM_001004440	chr1,chr1,chr1	+,-,+	FAM19A3,PPM1J,FAM19A3	-2729,-7917,-2729
chr6:43459187-43459707	chr6	+	43459314	43459738	True	NM_001012974,NM_001146017	chr6,chr6	-,+	C6orf154,TJAP1	18736,-2056
chr1:152784852-152785064	chr1	+	152784855	152784943	True	NM_178351,NM_178349	chr1,chr1	-,+	LCE1C,LCE1B	-5748,-459
chr9:5304345-5304671	chr9	+	5304439	5304719	True	NM_005059,NM_134441,NM_002195	chr9,chr9,chr9	-,-,+	RLN2,RLN2,INSL4	71,71,-73071
chr9:5304345-5304671	chr9	+	5339605	5339655	False	NM_002195,NM_006911	chr9,chr9	+,-	INSL4,RLN1	-108237,268
chr18:43650111-43651426	chr18	+	43650121	43650987	True	NM_024430,NM_138443	chr18,chr18	-,+	PSTPIP2,HAUS1	1313,33310
chr7:45146683-45146898	chr7	+	45146814	45146910	True	NM_030900,NM_199122,NR_002990,NR_002919,NR_002991,NM_004749,NM_005856	chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,-,+	TBRG4,TBRG4,SNORA5B,SNORA5A,SNORA5C,TBRG4,RAMP3	4457,4457,-1116,-2733,-2173,4457,50456
chr1:31384475-31384681	chr1	+	31384498	31384730	True	NR_002762,NM_014654	chr1,chr1	+,-	PRO0611,SDC3	76181,-3018
chr11:71791016-71791324	chr11	+	71791090	71791206	True	NM_006185,NR_036123,NM_145309,NM_001145310,NR_026886,NM_001205138,NM_001145307,NM_001145308,NM_001145309	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,+,+,+,+,+,+,+	NUMA1,MIR3165,LRTOMT,LRTOMT,LRTOMT,LRTOMT,LRTOMT,LRTOMT,LRTOMT	417,-7742,170,175,486,170,170,170,175
chr3:42743139-42743742	chr3	+	42743188	42743786	True	NM_152393,NM_020707,NR_027753	chr3,chr3,chr3	+,-,-	KBTBD5,HHATL,HHATL	-16228,583,-175
chr21:40721424-40721761	chr21	+	40721427	40721539	True	NM_004627,NM_004965	chr21,chr21	+,-	WRB,HMGN1	30673,-380
chr9:35749778-35751275	chr9	+	35749997	35751239	True	NM_020944,NM_001080496,NM_001044264	chr9,chr9,chr9	-,+,-	GBA2,RGP1,MSMP	-772,-771,3085
chr9:123340935-123341645	chr9	+	123341157	123341593	True	NR_027442,NM_018249,NM_001011649	chr9,chr9,chr9	+,-,-	LOC100288842,CDK5RAP2,CDK5RAP2	214181,894,894
chr7:44183640-44184791	chr7	+	44183771	44184782	True	NM_021223,NM_001129	chr7,chr7	-,+	MYL7,AEBP1	-2855,-39864
chr2:85661561-85661925	chr2	+	85661568	85661963	True	NM_001747,NM_198482	chr2,chr2	-,+	CAPG,SH2D6	-23892,18
chr14:62498500-62499370	chr14	+	62498504	62499384	True	NM_031914,NM_001017970	chr14,chr14	+,-	SYT16,TMEM30B	-36017,-749974
chr1:155214113-155214324	chr1	+	155214256	155214316	True	NM_000157,NM_020897,NM_001171812,NM_001171811,NM_001005742,NM_001005741	chr1,chr1,chr1,chr1,chr1,chr1	-,+,-,-,-,-	GBA,HCN3,GBA,GBA,GBA,GBA	-3187,33057,-3190,387,387,387
chr16:74701002-74701439	chr16	+	74701074	74701390	True	NM_018124,NM_032268	chr16,chr16	-,+	RFWD3,ZNRF1	-295,331524
chr3:42726988-42727283	chr3	+	42727137	42727227	True	NM_152393,NR_027753	chr3,chr3	+,-	KBTBD5,HHATL	-177,15836
chr11:111632606-111633567	chr11	+	111632759	111633221	True	NM_181699,NM_181700,NM_022761,NM_002716,NM_001177563,NM_001177562	chr11,chr11,chr11,chr11,chr11,chr11	-,-,+,-,-,-	PPP2R1B,PPP2R1B,C11orf1,PPP2R1B,PPP2R1B,PPP2R1B	3998,3998,116726,3998,3998,3998
chr19:1594168-1594796	chr19	+	1594296	1594566	True	NR_026557,NM_003926	chr19,chr19	+,-	PLK5P,MBD3	-70269,-1644
chr20:24930239-24931205	chr20	+	24930456	24931108	True	NM_003650,NM_020531	chr20,chr20	+,-	CST7,C20orf3	-642,42367
chr16:15189429-15190751	chr16	+	15190260	15190646	True	NM_018427,NM_015027	chr16,chr16	-,+	RRN3,PDXDC1	-2102,-121486
chr16:15189429-15190751	chr16	+	21833975	21834025	False	NM_170664,NR_003370	chr16,chr16	+,-	OTOA,RRN3P1	-117742,-3480
chr16:15189429-15190751	chr16	-	29084816	29084938	False	NM_024816,NR_003369	chr16,chr16	-,+	RABEP2,RRN3P2	-148284,1224
chr19:41304236-41304484	chr19	+	41304266	41304531	True	NM_053046,NM_198476,NM_080732	chr19,chr19,chr19	+,-,+	EGLN2,C19orf54,EGLN2	802,-48438,516
chrX:142721838-142722142	chrX	+	142721899	142722191	True	NM_001012989,NM_001184750,NM_001184749,NM_173078	chrX,chrX,chrX,chrX	+,-,-,-	UBE2NL,SLITRK4,SLITRK4,SLITRK4	244981,178,1785,878
chr9:90559233-90559500	chr9	+	90559338	90559424	True	NM_001145124,NM_001039803	chr9,chr9	+,-	FAM75C1,CDK20	-26512,30321
chr19:51504453-51504671	chr19	+	51504453	51504715	True	NM_012315,NM_144505,NM_144507,NM_144506,NM_014441,NM_007196	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,+,-	KLK9,KLK8,KLK8,KLK8,SIGLEC9,KLK8	8225,293,293,293,123421,293
chr17:79342786-79343159	chr17	+	79342816	79342956	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	30583,-38342
chr19:20736223-20737827	chr19	+	20736649	20737620	True	NM_001159293,NR_034060	chr19,chr19	-,+	ZNF737,ZNF85	11060,368438
chr19:10561526-10563285	chr19	+	10561819	10563277	True	NM_006202,NM_007065	chr19,chr19	+,-	PDE4A,CDC37	355,-47548
chr11:75479186-75479513	chr11	+	75479282	75479428	True	NM_032564,NM_207577	chr11,chr11	+,-	DGAT2,MAP6	349,-99803
chr3:101441679-101442677	chr3	+	101441765	101441834	True	NM_000986,NM_024548	chr3,chr3	-,+	RPL24,CEP97	-36202,1659
chr17:41857712-41858986	chr17	+	41857712	41858528	True	NM_004090,NM_001136483	chr17,chr17	-,+	DUSP3,C17orf105	-1344,40
chr2:207609455-207610745	chr2	+	207609758	207610397	True	NM_001039845,NM_001136193	chr2,chr2	-,+	MDH1B,FASTKD2	19710,19714
chr15:75495211-75495453	chr15	+	75495214	75495501	True	NM_015492,NR_030360	chr15,chr15	+,-	C15orf39,MIR631	-1044,150575
chr1:87170307-87170518	chr1	+	87170322	87170398	True	NM_016009,NM_004261	chr1,chr1	+,-	SH3GLB1,SEP15	-116,209759
chr17:27050509-27051318	chr19	+	15723157	15723213	True	NM_007253,NM_052890	chr19,chr19	+,-	CYP4F8,PGLYRP2	2815,-132842
chr5:179231421-179232586	chr5	+	179231554	179232602	True	NR_031598,NM_054013,NM_001142298,NM_014275,NM_001142299	chr5,chr5,chr5,chr5,chr5	-,-,+,-,+	MIR1229,MGAT4B,SQSTM1,MGAT4B,SQSTM1	-6208,-1679,785,1400,1400
chrX:69509942-69510214	chrX	+	69510017	69510210	True	NM_016484,NM_012310,NM_001032726	chrX,chrX,chrX	-,+,+	PDZD11,KIF4A,RAB41	-219,-189,-8046
chr8:32517931-32518180	chr8	+	32517962	32518220	True	NM_013959,NM_032664	chr8,chr8	+,-	NRG1,FUT10	-13771,812494
chrX:148620949-148621375	chrX	+	148620988	148621092	True	NM_001171909,NM_001171907,NM_178124,NM_001171908,NR_027455	chrX,chrX,chrX,chrX,chrX	+,+,+,+,-	CXorf40A,CXorf40A,CXorf40A,CXorf40A,LOC100131434	4973,1426,1426,1426,270
chr8:39808631-39808876	chr8	+	39808630	39808920	True	NM_194294,NM_001464	chr8,chr8	+,-	IDO2,ADAM2	-16207,-112851
chr9:80617787-80618450	chr9	+	80617807	80618459	True	NM_001098802,NM_002072	chr9,chr9	+,-	CEP78,GNAQ	232531,27811
chr12:132310335-132311433	chr12	+	132310551	132311449	True	NM_175066,NM_016155	chr12,chr12	-,+	DDX51,MMP17	317481,1491
chr6:33256375-33256581	chr6_mcf_hap5	+	4730118	4730180	False	NM_014260,NM_001164267,NM_005452	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	+,-,-	PFDN6,WDR46,WDR46	941,918,918
chr6:33256375-33256581	chr6_dbb_hap3	+	4537700	4537762	False	NM_014260,NM_001164267,NM_005452	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	+,-,-	PFDN6,WDR46,WDR46	941,918,918
chr6:33256375-33256581	chr6	+	33256374	33256436	True	NM_014260,NM_001185181,NM_001164267,NM_005452	chr6,chr6,chr6,chr6	+,+,-,-	PFDN6,PFDN6,WDR46,WDR46	941,975,918,918
chr6:33256375-33256581	chr6_cox_hap2	+	4700188	4700250	False	NM_014260,NM_001164267,NM_005452	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,-,-	PFDN6,WDR46,WDR46	941,918,918
chr14:32818634-32820238	chr14	+	32818709	32820089	True	NR_027263,NM_004274	chr14,chr14	-,+	C14orf128,AKAP6	-272804,-20288
chr1:46649130-46649992	chr1	+	46649207	46650009	True	NM_017739,NM_005727	chr1,chr1	-,+	POMGNT1,TSPAN1	14162,-8509
chr14:24566924-24568411	chr14	+	24567323	24568339	True	NM_001018073,NM_006177,NM_004563	chr14,chr14,chr14	+,-,+	PCK2,NRL,PCK2	-3891,-13491,-3891
chr6:26991551-26991810	chr6	+	26991637	26991837	True	NR_026775,NR_026776	chr6,chr6	+,-	NCRNA00240,LOC100270746	-66916,-3552
chr8:67784057-67784912	chr8	+	67784207	67784893	True	NR_002598,NM_173518,NM_001136160,NM_001136161	chr8,chr8,chr8,chr8	-,+,+,+	SNORD87,C8orf45,C8orf45,C8orf45	49949,-1281,-528,-1281
chr16:70323861-70324160	chr16	+	70323871	70323949	True	NM_001014451,NM_001014449,NM_007242,NM_001605	chr16,chr16,chr16,chr16	+,+,+,-	DDX19B,DDX19B,DDX19B,AARS	9122,9122,9122,-459
chr11:5257142-5258337	chr11	+	5257141	5258167	True	NR_001589,NM_000519,NM_000518,NM_001004750	chr11,chr11,chr11,chr11	-,-,-,+	HBBP1,HBD,HBB,OR51B6	6719,-1283,-8840,114570
chr15:49466226-49466633	chr15	+	49466225	49466503	True	NM_004236,NM_002044	chr15,chr15	-,+	COPS2,GALK2	-18371,-3859
chr2:235406412-235406664	chr2	+	235406504	235406662	True	NM_006944,NM_005737	chr2,chr2	+,-	SPP2,ARL4C	-447209,-811
chr1:6558502-6558725	chr1	+	6558503	6558563	True	NM_001042664,NM_020631,NM_138697,NM_001042663	chr1,chr1,chr1,chr1	-,-,+,-	PLEKHG5,PLEKHG5,TAS1R1,PLEKHG5	-7863,-6743,56774,-1019
chr4:25862705-25863714	chr4	+	25862720	25863734	True	NM_001145432,NM_015187	chr4,chr4	+,-	C4orf52,SEL1L3	52079,926
chr20:62131644-62131903	chr20	+	62131776	62131952	True	NM_024299,NM_001958	chr20,chr20	+,-	PPDPF,EEF1A2	20180,-1271
chr1:223894704-223896048	chr1	+	223894796	223896010	True	NM_001143962,NM_001146068,NM_001748	chr1,chr1,chr1	-,+,+	CAPN8,CAPN2,CAPN2	-41360,-5552,4108
chr12:113382971-113384583	chr12	+	113383234	113384287	True	NM_001193521,NM_006187	chr12,chr12	-,+	RASAL1,OAS3	189329,-7036
chr2:169886543-169887251	chr2	+	169886555	169887301	True	NM_005771,NM_003742	chr2,chr2	+,-	DHRS9,ABCB11	33997,584
chr10:48952872-48953323	chr10	+	48952881	48953352	True	NR_026566,NM_153034,NR_003611	chr10,chr10,chr10	-,+,-	BMS1P1,ZNF488,BMS1P5	-252,-597843,-252
chr10:48952872-48953323	chr10	-	48184976	48185468	False	NM_002900,NR_024495	chr10,chr10	-,+	RBP3,LOC642826	205573,387
chr10:48952872-48953323	chr10	+	46763561	46763615	False	NR_027632,NR_026566,NR_003611	chr10,chr10,chr10	+,-,-	FAM35B,BMS1P1,BMS1P5	134025,-669,-669
chr10:48952872-48953323	chr10	+	47243881	47244380	False	NR_027634,NR_024495	chr10,chr10	+,-	FAM35B2,LOC642826	135339,-387
chr7:44039766-44040747	chr7	+	44040422	44040580	True	NM_175064,NR_003655	chr7,chr7	+,-	SPDYE1,POLR2J4	16,18218
chr14:37639383-37640009	chr14	+	37639528	37639766	True	NM_001171170,NR_033240,NM_030631	chr14,chr14,chr14	-,+,-	SLC25A21,LOC100129794,SLC25A21	2149,1464,2149
chr9:139302297-139303174	chr9	+	139302300	139303144	True	NM_006643,NM_003086,NM_015160,NM_001039707,NM_001039708	chr9,chr9,chr9,chr9,chr9	-,-,+,-,-	SDCCAG3,SNAPC4,PMPCA,SDCCAG3,SDCCAG3	1960,-9411,1971,1960,1960
chr11:64937398-64938203	chr11	+	64937663	64937962	True	NM_001008778,NM_172230	chr11,chr11	+,-	SPDYC,SYVN1	-7,-35660
chr8:145161122-145161372	chr8	+	145161219	145161389	True	NM_030974,NR_024207,NM_032272	chr8,chr8,chr8	-,+,+	SHARPIN,KIAA1875,MAF1	-2079,1239,-1965
chr11:128758228-128759907	chr11	+	128758356	128759779	True	NM_000890,NM_145013	chr11,chr11	+,-	KCNJ5,C11orf45	1533,15864
chr6:24134155-24134632	chr6	+	24134427	24134679	True	NM_016356,NM_080723	chr6,chr6	-,+	DCDC2,NRSN1	223651,-8076
chr6:150686154-150687596	chr6	+	150686376	150687588	True	NM_001164695,NM_001164694,NM_203395,NM_024518	chr6,chr6,chr6,chr6	+,+,+,-	IYD,IYD,IYD,ULBP3	2439,2439,2439,-296174
chr19:2736547-2736863	chr19	+	2736647	2736841	True	NM_003249,NM_213568,NM_144564	chr19,chr19,chr19	+,-,-	THOP1,SLC39A3,SLC39A3	48664,3283,3283
chr7:138349555-138350950	chr7	+	138349940	138350846	True	NM_174959,NM_001085429	chr7,chr7	-,+	SVOPL,TMEM213	-971,131892
chr3:119218567-119219308	chr3	+	119218621	119219351	True	NM_016589,NM_018266	chr3,chr3	+,-	C3orf1,TMEM39A	-1304,-36150
chr9:87296457-87298116	chr9	+	87296628	87297883	True	NM_001007097,NM_022127	chr9,chr9	+,-	NTRK2,SLC28A3	-12060,-313215
chr21:46711691-46712047	chr21	+	46711758	46712036	True	NM_133635,NR_026943,NR_004858,NM_015227	chr21,chr21,chr21,chr21	-,+,-,-	POFUT2,LOC642852,POFUT2,POFUT2	-3947,-3842,-3947,-3947
chr17:36506829-36507583	chr17	+	36506981	36507621	True	NM_001004334,NM_014598	chr17,chr17	-,+	GPR179,SOCS7	-7288,385
chr7:150079012-150079383	chr7	+	150079189	150079415	True	NM_173680,NM_002889	chr7,chr7	+,-	ZNF775,RARRES2	-2834,-40426
chr10:17685615-17686311	chr10	+	17685684	17686310	True	NM_003473,NM_014241,NR_037774	chr10,chr10,chr10	+,-,+	STAM,PTPLA,STAM	85,-26311,85
chr19:3227770-3228392	chr19	+	3227801	3228291	True	NR_033342,NM_198969,NM_021938,NM_001172673	chr19,chr19,chr19,chr19	+,-,+,+	CELF5,AES,CELF5,CELF5	-2369,-164837,-3151,-3150
chr9:37750857-37751836	chr9	+	37751017	37751633	True	NM_016042,NM_144964	chr9,chr9	-,+	EXOSC3,RG9MTD3	33482,2168
chr21:11175439-11176866	chr22	-	18692793	18692853	False	NR_003267,NM_017414	chr22,chr22	-,+	GGT3P,USP18	86681,-60096
chr21:11175439-11176866	chr22	+	18712884	18712944	False	NM_017414,NR_003267	chr22,chr22	+,-	USP18,GGT3P	-80187,66590
chr21:11175439-11176866	chr22	+	21515793	21515853	False	NR_037566,NR_002829	chr22,chr22	+,-	BCRP2,P2RX6P	-58549,-117255
chr21:11175439-11176866	chr22	-	21685345	21685405	False	NR_003700,NR_024583	chr22,chr22	-,+	PI4KAP2,POM121L8P	186435,-48692
chr21:11175439-11176866	chr22	+	20321084	20321144	False	NR_026919,NM_033257	chr22,chr22	+,-	LOC150197,DGCR6L	-127290,-13456
chr21:11175439-11176866	chr22	+	20684856	20684916	False	NM_153334,NM_003426	chr22,chr22	-,+	SCARF2,ZNF74	107290,63563
chr21:11175439-11176866	chr21	+	11176274	11176338	True	NM_001187,NR_037458	chr21,chr21	-,+	BAGE,MIR3687	-77337,-1350122
chr16:71257497-71258555	chr16	+	71258075	71258423	True	NM_032821,NM_001198542,NM_001198543,NM_001740,NM_017558	chr16,chr16,chr16,chr16,chr16	-,-,-,+,-	HYDIN,HYDIN,HYDIN,CALB2,HYDIN	6210,6266,6266,134192,6233
chr9:136245226-136246021	chr9	+	136245277	136246009	True	NM_153710,NM_033161	chr9,chr9	+,-	C9orf96,SURF4	-2044,-2307
chr1:157563618-157564847	chr1	+	157563695	157564672	True	NM_018240,NM_031282	chr1,chr1	+,-	KIRREL,FCRL4	398390,3256
chr10:95109-96015	chr10	+	95128	96052	True	NM_001164154,NM_177987,NM_006624	chr10,chr10,chr10	-,-,+	TUBB8,TUBB8,ZMYND11	140,50,84352
chr11:2229780-2230146	chr11	+	2229779	2230187	True	NM_199293,NR_028044	chr11,chr11	-,+	TH,IGF2AS	-36744,-68072
chr7:6691248-6691451	chr7	+	6691398	6691474	True	NM_017560,NM_006956	chr7,chr7	+,-	ZNF853,ZNF12	-35922,55142
chrX:11777132-11777785	chrX	+	11777301	11777821	True	NM_078628,NM_006800,NM_001193270,NM_006125,NM_078629	chrX,chrX,chrX,chrX,chrX	+,+,+,-,+	MSL3,MSL3,MSL3,ARHGAP6,MSL3	-1074,67,-643,-93480,-1074
chr7:149033418-149035022	chr7	+	149033801	149034719	True	NR_036573,NM_015694	chr7,chr7	+,-	LOC155060,ZNF777	-51493,123393
chr15:97951744-97953482	chr15	+	97951860	97953183	True	NM_183376,NR_024172	chr15,chr15	+,-	ARRDC4,LOC91948	550749,464526
chr2:98700517-98700758	chr2	+	98700584	98700807	True	NM_015348,NM_144992	chr2,chr2	-,+	TMEM131,VWA3B	-88230,2787
chr10:17272343-17272992	chr10	+	17272622	17272874	True	NM_003380,NM_004412	chr10,chr10	+,-	VIM,TRDMT1	-2415,-28552
chr12:120718505-120720053	chr12	+	120718929	120720091	True	NM_002859,NM_012240	chr12,chr12	-,+	PXN,SIRT4	-15366,20032
chr4:68337712-68338364	chr4	+	68337722	68338408	True	NM_001812,NM_012108	chr4,chr4	-,+	CENPC1,STAP1	72902,86037
chr6:108486269-108486500	chr6	+	108486290	108486534	True	NM_003269,NM_014028	chr6,chr6	+,-	NR2E1,OSTM1	680,-90349
chr7:130798550-130799550	chr7	+	130798816	130799362	True	NR_015431,NM_001145354,NR_024153	chr7,chr7,chr7	-,+,-	FLJ43663,MKLN1,FLJ43663	-5254,-4025,-7027
chr13:22246138-22246400	chr13	+	22246228	22246364	True	NM_152726,NM_002010	chr13,chr13	-,+	EFHA1,FGF9	-67873,-1064
chr22:39915814-39916069	chr22	+	39915813	39915935	True	NM_194326,NM_182810,NM_001675	chr22,chr22,chr22	-,+,+	RPS19BP1,ATF4,ATF4	12975,633,633
chr1:6578994-6579387	chr1	+	6579200	6579416	True	NM_198681,NM_138697	chr1,chr1	-,+	PLEKHG5,TAS1R1	703,35921
chrX:19501230-19502242	chrX	+	19501398	19502186	True	NM_001173456,NM_001001671	chrX,chrX	+,-	PDHA1,MAP3K15	-139441,31246
chr1:24151848-24152259	chr1	+	24151847	24152128	True	NM_000191,NM_001166059,NM_007260	chr1,chr1,chr1	-,-,+	HMGCL,HMGCL,LYPLA2	-78,-78,-34252
chr4:103220048-103221084	chr4	+	103220064	103221059	True	NM_001135148,NM_001165412	chr4,chr4	-,+	SLC39A8,NFKB1	24460,201426
chr9:136222155-136222942	chr9	+	136222443	136222964	True	NM_133640,NM_000972,NM_181491,NR_000017,NR_002447,NM_003172,NM_017503,NR_002448,NR_000016	chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,+,-,+,+,-,+,+,+	MED22,RPL7A,MED22,SNORD36B,SNORD24,SURF1,SURF2,SNORD36A,SNORD36C	-7471,-7436,-7471,-5556,-6254,447,456,-5194,-4804
chr10:124906972-124907200	chr10	+	124906976	124907168	True	NM_001007793,NM_004725,NM_022466,NM_005519	chr10,chr10,chr10,chr10	+,+,-,+	BUB3,BUB3,IKZF5,HMX2	6591,6591,-138665,469
chr2:98207167-98208411	chr2	+	98207286	98208217	True	NM_025190,NM_001862	chr2,chr2	-,+	ANKRD36B,COX5B	-858,54303
chr2:98207167-98208411	chr2	+	96659442	96659500	False	NM_207328,NR_003698	chr2,chr2	-,+	GPAT2,LOC729234	41285,16798
chr1:112933888-112934335	chr1	+	112933992	112934312	True	NM_018704,NR_036210	chr1,chr1	+,-	CTTNBP2NL,MIR4256	4487,70193
chr3:26666119-26666785	chr3	+	26666247	26666780	True	NM_052953,NM_199347	chr3,chr3	+,-	LRRC3B,NEK10	-1998,744182
chr5:94397432-94398960	chr5	+	94397533	94398965	True	NM_152548,NM_001002796	chr5,chr5	+,-	FAM81B,MCTP1	328082,18630
chr10:126107818-126108096	chr10	+	126107923	126108146	True	NM_000274,NM_001171814,NM_001167880	chr10,chr10,chr10	-,-,+	OAT,OAT,LHPP	-378,-378,42194
chr1:201473100-201473946	chr1	+	201473105	201473787	True	NM_001193570,NM_001193571,NM_001193572,NR_026667,NM_004078	chr1,chr1,chr1,chr1,chr1	-,-,-,+,-	CSRP1,CSRP1,CSRP1,RPS10P7,CSRP1	2650,2230,-7404,15244,2650
chr1:10492435-10492806	chr1	+	10492460	10492773	True	NM_198544,NM_004401,NR_036462,NM_199294,NM_199006,NR_037187,NR_037186	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,-,+,+,+,+,+	APITD1-CORT,DFFA,APITD1,APITD1,APITD1-CORT,APITD1-CORT,APITD1-CORT	-2352,39891,-1707,-2352,-2352,-1707,-1707
chr3:46039356-46040840	chr3	+	46039508	46040858	True	NM_024513,NM_006564	chr3,chr3	-,+	FYCO1,CXCR6	-2201,-54588
chr1:171118799-171120434	chr1	+	171118837	171120453	True	NR_002601,NR_031627	chr1,chr1	+,-	FMO6P,MIR1295	-12009,-47890
chr17:60215826-60216147	chr19	+	621818	622172	False	NM_005035,NM_020637	chr19,chr19	-,+	POLRMT,FGF22	11748,17753
chr17:60215826-60216147	chr17	+	60215900	60216196	True	NM_001144933,NM_005121	chr17,chr17	+,-	EFCAB3,MED13	231382,-73257
chr7:150554124-150554535	chr7	+	150554132	150554550	True	NM_001091,NM_014020	chr7,chr7	+,-	ABP1,TMEM176B	-4610,-55684
chr17:48453207-48453974	chr17	+	48453314	48453876	True	NM_152463,NM_016504,NM_001166131	chr17,chr17,chr17	+,-,+	EME1,MRPL27,EME1	-2785,-2752,-2785
chr2:97564401-97566049	chr2	+	97564449	97566067	True	NM_001172667,NM_199078,NM_016490	chr2,chr2,chr2	-,+,-	FAM178B,CNNM3,FAM178B	-3550,-82509,-579
chr12:104607630-104609510	chr12	+	104607868	104609474	True	NM_006166,NM_001093771	chr12,chr12	-,+	NFYB,TXNRD1	-75828,84
chr10:91371686-91372530	chr10	+	91371715	91372548	True	NR_029524,NM_016195	chr10,chr10	-,+	MIR107,KIF20B	-19131,88818
chr1:206854654-206855955	chr1	+	206854764	206855921	True	NM_032960,NM_004759,NM_006893	chr1,chr1,chr1	+,+,-	MAPKAPK2,MAPKAPK2,EIF2D	2367,2367,-68860
chr2:10445571-10446244	chr2	+	10445708	10446232	True	NM_134421,NM_002149,NR_036222	chr2,chr2,chr2	+,+,-	HPCAL1,HPCAL1,MIR4261	-1940,-2726,-112911
chr3:119378778-119379368	chr3	+	119378832	119379408	True	NM_033364,NM_022135	chr3,chr3	+,-	C3orf15,POPDC2	42460,46
chr11:117106071-117106767	chr11	+	117106599	117106688	True	NM_004716,NM_207343,NM_001077239	chr11,chr11,chr11	-,+,+	PCSK7,RNF214,RNF214	-3788,-3253,-3205
chr3:50329411-50329672	chr3	+	50329446	50329716	True	NM_001200016,NM_001200029,NM_003549,NM_001200030,NM_001200031,NM_001200032,NM_012191,NM_001200018,NM_153215,NM_006764	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,-,-,-,-,+,-	NAT6,HYAL3,HYAL3,HYAL3,HYAL3,HYAL3,NAT6,NAT6,C3orf45,IFRD2	7186,6627,7233,7233,7233,7233,7186,6654,-12979,360
chr11:124617770-124618405	chr11	+	124617774	124618444	True	NM_001126181,NM_006176,NM_014312	chr11,chr11,chr11	+,+,-	NRGN,NRGN,VSIG2	-7996,-7996,3715
chr5:99384699-99385134	chr5	+	99384766	99385135	True	NM_198507,NR_027503	chr5,chr5	+,-	FAM174A,LOC100133050	485988,338874
chr19:51302788-51303141	chr19	+	51302845	51303059	True	NR_003067,NR_003069,NR_003068,NM_033068,NM_199249,NM_199250	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,+,-,-	SNORD88A,SNORD88C,SNORD88B,ACPT,C19orf48,C19orf48	-53,2669,-463,-9224,4965,4963
chr19:7747070-7747366	chr19	+	7747138	7747408	True	NM_002002,NM_174894,NM_001042462,NM_001042461,NM_174918	chr19,chr19,chr19,chr19,chr19	-,+,+,+,+	FCER2,TRAPPC5,TRAPPC5,TRAPPC5,C19orf59	19674,-1428,-1482,-1425,-5246
chr2:179737607-179739393	chr2	+	179737606	179739084	True	NM_019091,NM_133379	chr2,chr2	+,-	PLEKHA3,TTN	-392466,-65456
chr1:207087326-207088500	chr1	+	207087335	207088541	True	NM_005449,NM_001142473,NM_006850,NM_001193338	chr1,chr1,chr1,chr1	-,-,+,-	FAIM3,FAIM3,IL24,FAIM3	6887,6887,-16599,6744
chr11:916700-917303	chr11	+	917006	917150	True	NM_012305,NM_001142675,NM_001142674,NM_001142677,NM_001142676,NM_023947	chr11,chr11,chr11,chr11,chr11,chr11	+,-,-,-,-,-	AP2A2,CHID1,CHID1,CHID1,CHID1,CHID1	8690,-1948,-6132,-6132,-6132,-6132
chr13:25943021-25944633	chr13	+	25943071	25944429	True	NM_004685,NM_016529	chr13,chr13	-,+	MTMR6,ATP8A2	-81367,1779
chr5:156884827-156886026	chr5	+	156885039	156885942	True	NM_001099287,NM_001001343,NM_001172292	chr5,chr5,chr5	+,-,+	NIPAL4,FNDC9,NIPAL4	1084,-112310,1084
chr15:28342545-28342960	chr15	+	28342548	28342860	True	NM_000275,NR_033351	chr15,chr15	-,+	OCA2,GOLGA8F	1648,280923
chr1:120933669-120934351	chr1	+	120933701	120934290	True	NM_001004340,NR_027337,NM_001017986	chr1,chr1,chr1	-,+,-	FCGR1B,HIST2H2BA,FCGR1B	1705,-27727,1705
chr1:120933669-120934351	chr1	-	149371054	149371104	False	NR_027484,NM_001024599	chr1,chr1	+,-	FCGR1C,HIST2H2BF	-1811,28175
chr1:120933669-120934351	chr1	-	149755901	149755952	False	NM_001161334,NM_000566	chr1,chr1	-,+	HIST2H2BF,FCGR1A	28027,-1703
chr14:90407848-90409331	chr14	+	90408618	90409332	True	NM_145231,NM_001008744	chr14,chr14	-,+	EFCAB11,TDP1	11807,12913
chrX:70340619-70340881	chrX	+	70340752	70340884	True	NM_000206,NM_005120	chrX,chrX	-,+	IL2RG,MED12	-9271,-2404
chr15:101418965-101419241	chr15	+	101418969	101419174	True	NM_001040616,NM_000693	chr15,chr15	-,+	LINS,ALDH1A3	-276524,834
chr22:42470606-42470866	chr22	+	42470831	42470908	True	NM_000262,NM_001002034,NM_033318	chr22,chr22,chr22	-,+,+	NAGA,FAM109B,C22orf32	-3985,-628,4790
chr17:7127327-7127685	chr17	+	7127346	7127720	True	NM_001365,NR_029896,NM_001033859,NM_000018,NM_001128827	chr17,chr17,chr17,chr17,chr17	-,-,+,+,-	DLG4,MIR324,ACADVL,ACADVL,DLG4	-3977,-648,-4244,-4244,-6418
chr2:170581945-170583759	chr2	+	170581945	170583775	True	NM_001085447,NM_144711	chr2,chr2	-,+	C2orf77,KLHL23	-31014,6580
chr20:19803192-19804531	chr20	+	19803191	19804004	True	NM_016652,NM_018993	chr20,chr20	-,+	CRNKL1,RIN2	232737,66205
chr19:41948292-41949116	chr19	+	41948486	41949110	True	NM_001167869,NM_001167868,NM_018035,NM_001167870,NM_001167871,NM_001167867,NM_001130514,NR_030765	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,+,-	ATP5SL,ATP5SL,ATP5SL,ATP5SL,ATP5SL,ATP5SL,C19orf69,ATP5SL	-2643,-3005,-2643,-2643,-2643,-3005,-48,-2643
chr19:41901486-41902408	chr19	+	41901609	41902458	True	NM_020158,NM_000709,NM_001164783	chr19,chr19,chr19	-,+,+	EXOSC5,BCKDHA,BCKDHA	849,1235,1235
chrX:74316182-74318066	chrX	+	74316293	74317839	True	NM_145052,NM_004299	chrX,chrX	+,-	UPRT,ABCB7	176054,58355
chr4:183741266-183741497	chr4	+	183741339	183741411	True	NR_003612,NM_001012732	chr4,chr4	+,-	FAM92A3,DCTD	217406,97269
chr7:149015440-149017110	chr7	+	149015445	149017091	True	NR_036573,NM_015694	chr7,chr7	+,-	LOC155060,ZNF777	-33124,141012
chr7:32916788-32917578	chr7	+	32916959	32917318	True	NM_015483,NM_007270	chr7,chr7	-,+	KBTBD2,FKBP9	14201,79686
chr5:150724631-150724861	chr5	+	150724670	150724896	True	NM_001167607,NM_181776	chr5,chr5	+,-	GM2A,SLC36A2	-92111,2305
chr1:11244941-11245858	chr1	+	11245005	11245759	True	NM_021146,NM_004958	chr1,chr1	+,-	ANGPTL7,MTOR	3638,76908
chr5:9547833-9549234	chr5	+	9547911	9549273	True	NM_003966,NR_003689	chr5,chr5	-,+	SEMA5A,SNORD123	-1678,-108
chr19:15531732-15532837	chr19	+	15531976	15532622	True	NM_014371,NR_031716	chr19,chr19	-,+	AKAP8L,MIR1470	-2143,27736
chr14:77229094-77229352	chr14	+	77229095	77229309	True	NM_015305,NM_014909	chr14,chr14	-,+	ANGEL1,VASH1	50024,-911
chr9:37467850-37468376	chr9	+	37467981	37468349	True	NM_022490,NM_014872	chr9,chr9	+,-	POLR1E,ZBTB5	17595,-2574
chr15:81614574-81614776	chr15	+	81614692	81614816	True	NM_181900,NM_004513	chr15,chr15	-,+	STARD5,IL16	1758,-25490
chr7:856686-856890	chr7	+	856753	856939	True	NM_025154,NM_001164759,NM_001171945,NM_001171944,NM_001171946	chr7,chr7,chr7,chr7,chr7	+,-,+,+,+	SUN1,PRKAR1B,SUN1,SUN1,SUN1	-552,-89440,-552,-552,-1610
chr17:43224554-43224771	chr17	+	43224686	43224820	True	NM_133373,NM_006460	chr17,chr17	-,+	PLCD3,HEXIM1	-14795,-53
chr22:46547529-46549231	chr22	+	46547830	46548642	True	NM_018280,NM_207327,NM_001001928,NM_005036	chr22,chr22,chr22,chr22	-,-,+,+	C22orf26,C22orf40,PPARA,PPARA	-97806,97601,-1382,-1382
chr4:122685421-122685755	chr4	+	122685620	122685796	True	NM_152399,NR_024365	chr4,chr4	-,+	TMEM155,LOC100192379	594,-1
chr3:119188471-119189345	chr3	+	119188474	119189122	True	NM_018266,NM_152305,NR_024265	chr3,chr3,chr3	-,+,+	TMEM39A,POGLUT1,POGLUT1	-6003,-740,-740
chr5:141993565-141993821	chr5	+	141993598	141993789	True	NM_001144892,NM_001135608,NM_033137	chr5,chr5,chr5	-,+,-	FGF1,ARHGAP26,FGF1	7175,156502,-6
chr6:34663540-34664100	chr6	+	34663544	34663889	True	NM_022758,NM_024294,NM_003093	chr6,chr6,chr6	-,-,+	C6orf106,C6orf106,SNRPC	787,787,60981
chr9:135036365-135036594	chr9	+	135036442	135036562	True	NM_032536,NM_004269	chr9,chr9	+,-	NTNG2,MED27	771,-81189
chr6:47674147-47674896	chr6	+	47674184	47674936	True	NM_153838,NM_001013732	chr6,chr6	+,-	GPR115,C6orf138	-7948,361539
chr16:46919859-46920073	chr16	+	46919964	46920068	True	NM_133443,NM_001142466,NM_001001436	chr16,chr16,chr16	+,+,-	GPT2,GPT2,C16orf87	-1707,-913,-54890
chr7:121757840-121758960	chr7	+	121758250	121758972	True	NM_005763,NR_036484	chr7,chr7	-,+	AASS,LOC154860	25422,184739
chr12:56613403-56613653	chr12	+	56613445	56613531	True	NM_005785,NM_194359,NM_194358,NM_024068	chr12,chr12,chr12,chr12	-,-,-,+	RNF41,RNF41,RNF41,OBFC2B	2227,2258,2227,4593
chr2:11497759-11498555	chr2	+	11497800	11498336	True	NM_004850,NM_014668	chr2,chr2	-,+	ROCK2,GREB1	-13089,175905
chr2:128568380-128568877	chr2	+	128568498	128568908	True	NM_032740,NM_018383,NM_001006622,NM_001006623	chr2,chr2,chr2,chr2	+,-,-,-	SFT2D3,WDR33,WDR33,WDR33	-109952,-43,-43,-43
chr4:158140828-158141447	chr4	+	158140889	158141465	True	NM_001083619,NM_000826,NR_036641,NM_001083620	chr4,chr4,chr4,chr4	+,+,-,+	GRIA2,GRIA2,PDGFC,GRIA2	270,270,-248343,354
chr16:46603319-46603581	chr16	+	46603333	46603557	True	NR_026556,NM_014321	chr16,chr16	-,+	ANKRD26P1,ORC6	-324,120000
chr8:9923252-9923623	chr8	+	9923251	9923481	True	NR_029668,NM_012331	chr8,chr8	-,+	MIR124-1,MSRA	-162269,-11476
chr2:219576016-219576472	chr2	+	219576044	219576514	True	NM_022453,NM_014640	chr2,chr2	-,+	RNF25,TTLL4	-39263,-527
chr1:157016211-157016725	chr1	+	157016267	157016561	True	NM_198236,NM_014784,NR_001560	chr1,chr1,chr1	-,-,+	ARHGEF11,ARHGEF11,CYCSP52	-1105,-1105,81592
chr12:13152465-13152768	chr12	+	13152567	13152668	True	NM_015987,NR_002774	chr12,chr12	-,+	HEBP1,HTR7P1	634,707
chr5:138610137-138610346	chr5	+	138610182	138610351	True	NR_003141,NR_002915,NR_036536,NR_036535,NM_022464,NM_199189,NM_001194954	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,-,+,+	SNHG4,SNORA74A,SNHG4,MATR3,SIL1,MATR3,MATR3	-799,4117,-799,-799,-76117,-799,-799
chr15:51898033-51898495	chr15	+	51898138	51898325	True	NM_001174116,NM_001165257	chr15,chr15	-,+	DMXL2,SCG3	16699,75224
chr3:46904967-46905610	chr3	+	46904996	46905626	True	NM_000316,NM_000258	chr3,chr3	+,-	PTH1R,MYL3	13609,-23
chr1:167689836-167690861	chr1	+	167689868	167690878	True	NM_003851,NM_024569,NM_001146191,NM_003953	chr1,chr1,chr1,chr1	-,+,+,+	CREG1,MPZL1,MPZL1,MPZL1	-166812,308,308,308
chr15:83621713-83621951	chr15	+	83621728	83621996	True	NM_031452,NM_004839,NM_199330,NM_199331,NM_199332	chr15,chr15,chr15,chr15,chr15	+,-,-,-,-	FAM103A1,HOMER2,HOMER2,HOMER2,HOMER2	32998,-255,-255,-255,-255
chrX:6145209-6145459	chrX	+	6145253	6145507	True	NM_020742,NM_000351,NM_181332	chrX,chrX,chrX	-,+,-	NLGN4X,STS,NLGN4X	431,991964,1249
chrX:48768242-48768837	chrX	+	48768260	48768792	True	NM_005660,NM_006875,NM_001167992,NM_001032289,NM_001042498	chrX,chrX,chrX,chrX,chrX	-,-,+,-,-	SLC35A2,PIM2,PQBP1,SLC35A2,SLC35A2	175,7671,-12536,191,493
chr9:139304313-139304515	chr9	+	139304400	139304510	True	NM_006643,NM_015160,NM_001039707,NM_001039708	chr9,chr9,chr9,chr9	-,+,-,-	SDCCAG3,PMPCA,SDCCAG3,SDCCAG3	594,605,594,594
chr7:77164564-77164899	chr7	+	77164685	77164756	True	NM_001131008,NM_002835,NM_017439,NM_001131009	chr7,chr7,chr7,chr7	+,+,-,+	PTPN12,PTPN12,PION,PTPN12	2595,2016,-118968,2595
chr1:154350298-154351212	chr1	+	154350434	154351178	True	NM_001010846,NM_000565	chr1,chr1	-,+	SHE,IL6R	123398,26490
chr14:58045342-58045732	chr14	+	58045342	58045705	True	NM_001080455,NM_001011713	chr14,chr14	-,+	SLC35F4,NAA30	17961,-188124
chr16:70473717-70474069	chr16	+	70473742	70474114	True	NM_145059,NM_006927	chr16,chr16	+,-	FUK,ST3GAL2	14383,-751
chr3:135915025-135915273	chr3	+	135915031	135915322	True	NM_000532,NM_001145417,NM_018133	chr3,chr3,chr3	+,-,-	PCCB,MSL2,MSL2	53844,-1721,-343
chr22:41346351-41346971	chr22	+	41346507	41346937	True	NM_014248,NM_145174	chr22,chr22	+,-	RBX1,DNAJB7	413,-88377
chr12:25216279-25217041	chr12	+	25216303	25216958	True	NM_001101339,NM_006152	chr12,chr12	-,+	C12orf77,LRMP	-65930,-11182
chr5:157160834-157162104	chr5	+	157161006	157161845	True	NM_017872,NM_173491,NM_178424	chr5,chr5,chr5	+,+,-	THG1L,LSM11,SOX30	-2740,8909,-81578
chr14:94423483-94423948	chr14	+	94423498	94423972	True	NM_016150,NM_138344	chr14,chr14	-,+	ASB2,FAM181A	1,-38291
chr7:130082793-130083220	chr7	+	130082854	130083002	True	NM_177524,NM_018718	chr7,chr7	+,-	MEST,TSGA14	43043,-2000
chr4:141677867-141678135	chr4	+	141677870	141678140	True	NM_015130,NM_153702	chr4,chr4	-,+	TBC1D9,ELMOD2	-399,-232609
chr15:65367576-65368980	chr15	+	65368910	65368984	True	NM_001101362,NM_016563	chr15,chr15	+,-	KBTBD13,RASL12	169,-8522
chrX:147133612-147134254	chrX	+	147133616	147134250	True	NM_152578,NR_024503	chrX,chrX	+,-	FMR1NB,FMR1-AS1	-70818,-129940
chr11:75377716-75378445	chr11	+	75377815	75378347	True	NM_033063,NM_025098,NM_207577	chr11,chr11,chr11	-,+,-	MAP6,MOGAT2,MAP6	1182,50586,1182
chr3:193710503-193712063	chr3	+	193710957	193711953	True	NR_027764,NR_033944,NM_005524	chr3,chr3,chr3	-,-,+	LOC100128023,LOC647323,HES1	124,9545,141977
chr8:65711429-65711639	chr8	+	65711459	65711665	True	NM_152414,NM_004820	chr8,chr8	+,-	BHLHE22,CYP7B1	-218715,-111
chr19:18943879-18944396	chr19	+	18944034	18944247	True	NM_000095,NM_002911	chr19,chr19	-,+	COMP,UPF1	-41920,-1341
chr22:30793613-30794803	chr22	+	30793690	30794844	True	NM_033382,NM_001204204,NM_001017981,NM_012429	chr22,chr22,chr22,chr22	+,+,-,+	SEC14L2,SEC14L2,RNF215,SEC14L2	-811,-811,-10388,-811
chr4:87342157-87343866	chr4	+	87342397	87343807	True	NM_006264,NM_002753	chr4,chr4	+,-	PTPN13,MAPK10	171660,30536
chr19:29382086-29382796	chr19	+	29382127	29382633	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	73404,321553
chr7:6311410-6311666	chr7	+	6311468	6311610	True	NM_006908,NM_004227	chr7,chr7	+,-	RAC1,CYTH3	102515,682
chr20:30063496-30064019	chr20	+	30063516	30064056	True	NM_001037500,NR_024358,NM_014012	chr20,chr20,chr20	-,+,+	DEFB124,NCRNA00028,REM1	-2700,9524,-462
chr19:1274715-1275066	chr19	+	1274738	1275014	True	NR_023313,NR_027271,NM_017914,NM_001280,NR_023312	chr19,chr19,chr19,chr19,chr19	+,-,+,+,+	CIRBP,C19orf23,C19orf24,CIRBP,CIRBP	-5522,-4479,505,-5522,-5522
chr20:54985649-54986316	chr20	+	54985883	54986312	True	NM_020356,NM_001164114,NM_001164115,NM_001164116,NM_198437	chr20,chr20,chr20,chr20,chr20	+,+,+,+,-	CASS4,CASS4,CASS4,CASS4,AURKA	1001,1001,1001,855,-18532
chr14:75642280-75642942	chr14	+	75642553	75642804	True	NM_006827,NM_005252	chr14,chr14	-,+	TMED10,FOS	596,102676
chr21:38524079-38524777	chr21	+	38524117	38524665	True	NR_028352,NR_026719	chr21,chr21	-,+	PIGP,DSCR9	-78659,56289
chr1:206967869-206968151	chr1	+	206967874	206968182	True	NM_153758,NM_000572	chr1,chr1	+,-	IL19,IL10	4032,-22035
chr10:119305338-119306147	chr10	+	119305443	119306078	True	NM_004098,NR_002791,NM_001165924	chr10,chr10,chr10	+,-,+	EMX2,EMX2OS,EMX2	-3538,-864,-3538
chr11:43739064-43740386	chr11	+	43739218	43740244	True	NR_033868,NM_016142	chr11,chr11	-,+	LOC399881,HSD17B12	-448299,-37135
chr2:6077582-6078436	chr2	+	6077597	6078468	True	NM_207315,NR_026832	chr2,chr2	-,+	CMPK2,LOC150622	927518,-4829
chr19:35531233-35531807	chr19	+	35531287	35531721	True	NM_199037,NM_001037,NM_182983,NR_024561,NM_002151	chr19,chr19,chr19,chr19,chr19	+,+,+,-,+	SCN1B,SCN1B,HPN,LOC100128675,HPN	-9753,-9753,34,65504,34
chr1:37979707-37979976	chr1	+	37979711	37979827	True	NM_022756,NM_025079	chr1,chr1	-,+	MEAF6,ZC3H12A	587,-39643
chr6:152129768-152130186	chr6	+	152129770	152130228	True	NM_017909,NM_000125,NM_001122741,NM_001122740	chr6,chr6,chr6,chr6	-,+,+,+	RMND1,ESR1,ESR1,ESR1	-356454,-1009,-3015,-1369
chrX:19139703-19140010	chrX	+	19139825	19139991	True	NM_001079858,NM_001079859,NM_001079860,NM_001184835,NM_001184834,NM_001184837,NM_001184836,NM_001184833,NM_000284,NM_005756	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,-,-,-,+,-	GPR64,GPR64,GPR64,GPR64,GPR64,GPR64,GPR64,GPR64,PDHA1,GPR64	814,814,814,814,814,814,814,814,222019,814
chrX:103081093-103082755	chrX	+	103081192	103082479	True	NM_199478,NM_016370	chrX,chrX	+,-	PLP1,RAB9B	-49490,4783
chr17:79354656-79354874	chr17	+	79354775	79354923	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	18616,-50301
chr19:44098047-44098705	chr19	+	44098119	44098591	True	NM_001007561,NM_024327,NM_001145347	chr19,chr19,chr19	-,+,+	IRGQ,ZNF576,ZNF576	1746,1952,2146
chr18:35148474-35149894	chr18	+	35148911	35149916	True	NM_020180,NM_001025088,NM_001025089,NM_001025087,NR_036202	chr18,chr18,chr18,chr18,chr18	-,-,-,-,+	CELF4,CELF4,CELF4,CELF4,MIR4318	-2911,-2911,-2911,-2911,87181
chr2:130807598-130808309	chr2	+	130807621	130808265	True	NR_026758,NM_032144	chr2,chr2	-,+	LOC440905,RAB6C	489,-70437
chr2:130807598-130808309	chr2	-	132044351	132044898	False	NR_030728,NM_001077637	chr2,chr2	+,-	LOC440910,LOC150786	-7542,76883
chr2:130807598-130808309	chr2	+	131198890	131199026	False	NM_032357,NM_001079530	chr2,chr2	-,+	CCDC115,CFC1B	-98968,79640
chr2:130807598-130808309	chr2	-	131437644	131438190	False	NR_023391,NM_001079530	chr2,chr2	+,-	C2orf14,CFC1B	-74,-80393
chr11:18255859-18256521	chr11	+	18255878	18256565	True	NM_006512,NR_026563	chr11,chr11	-,+	SAA4,LOC494141	1874,-25113
chrY:14473127-14474970	chrY	+	14473678	14474985	True	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	299312,58454
chrX:48241598-48243262	chrX	+	48241811	48243030	True	NM_175729,NM_175711,NM_001040612,NM_005636,NM_001034832	chrX,chrX,chrX,chrX,chrX	+,-,+,+,+	SSX4,SSX3,SSX4B,SSX4,SSX4B	-20,-25669,-20,-20,-20
chrX:48241598-48243262	chrX	-	48271281	48272500	False	NM_175729,NM_001040612,NM_005636,NM_001034832	chrX,chrX,chrX,chrX	-,-,-,-	SSX4,SSX4B,SSX4,SSX4B	20,20,20,20
chr6:10434950-10435714	chr6	+	10435014	10435515	True	NR_033910,NR_027793	chr6,chr6	+,-	LOC100130275,C6orf218	-22514,41
chr6:52228021-52229646	chr6	+	52228085	52229420	True	NM_133367,NM_002388	chr6,chr6	+,-	PAQR8,MCM3	-1210,-78503
chr1:1936709-1937067	chr1	+	1936745	1937016	True	NM_000815,NM_001080484	chr1,chr1	+,-	GABRD,KIAA1751	13751,-1469
chr9:94184712-94185685	chr9	+	94184846	94185445	True	NR_037472,NM_005384	chr9,chr9	+,-	MIR3910-1,NFIL3	213087,749
chr12:117319393-117319823	chr12	+	117319545	117319759	True	NM_003806,NM_012174	chr12,chr12	-,+	HRK,FBXW8	-313,29001
chr2:103233410-103233952	chr2	+	103233562	103233966	True	NM_003048,NM_032718	chr2,chr2	+,-	SLC9A2,MFSD9	2199,119421
chr5:169812984-169813603	chr5	+	169813182	169813588	True	NM_004137,NM_001034838	chr5,chr5	-,+	KCNMB1,KCNIP1	3100,-32358
chr1:231663391-231663753	chr1	+	231663435	231663676	True	NR_028393,NR_028394,NR_028395,NR_028396,NR_028397,NR_028398,NR_028399,NR_033826,NM_005999,NR_028400	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,+,+,-,+,+	TSNAX-DISC1,TSNAX-DISC1,TSNAX-DISC1,TSNAX-DISC1,TSNAX-DISC1,TSNAX-DISC1,TSNAX-DISC1,SNRPD2P2,TSNAX,TSNAX-DISC1	722,722,722,722,722,722,722,-51164,722,722
chr12:79948201-79948726	chr12	+	79948331	79948532	True	NR_031700,NM_002583	chr12,chr12	+,-	MIR1252,PAWR	-135346,136315
chr14:50318378-50319134	chr14	+	50318661	50319159	True	NM_004713,NM_001663	chr14,chr14	-,+	NEMF,ARF6	430,40576
chr5:10566032-10567203	chr5	+	10566256	10567238	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-1873,194199
chr7:142645553-142645804	chr7	+	142645572	142645828	True	NM_000420,NM_178829	chr7,chr7	-,+	KEL,C7orf34	13725,-9026
chr4:46256760-46257773	chr4	+	46256759	46257530	True	NM_173536,NM_000812	chr4,chr4	-,+	GABRG1,GABRB1	-130677,775764
chrX:30595983-30596310	chrX	+	30595994	30596221	True	NM_000167,NM_025159	chrX,chrX	+,-	GK,CXorf21	75254,-11
chr20:49639904-49640109	chr20	+	49640019	49640093	True	NM_002237,NM_014484	chr20,chr20	-,+	KCNG1,MOCS3	-344,-64707
chr14:31930726-31932011	chr14	+	31930974	31931998	True	NM_080664,NM_025152	chr14,chr14	-,+	C14orf126,NUBPL	-4294,98592
chr3:16557907-16558376	chr3	+	16558009	16558387	True	NM_138381,NM_015150	chr3,chr3	+,-	OXNAD1,RFTN1	-251398,-2787
chr1:853264-853611	chr1	+	853286	853596	True	NM_152486,NR_026874	chr1,chr1	+,-	SAMD11,FLJ39609	7524,1271
chr19:14640006-14640308	chr19	+	14640033	14640149	True	NR_038104,NR_030369,NM_138501,NM_006145,NR_038103	chr19,chr19,chr19,chr19,chr19	+,+,+,-,+	TECR,MIR639,TECR,DNAJB1,TECR	229,205,229,-10832,229
chr7:27141316-27141677	chr7	+	27141348	27141499	True	NM_005522,NM_153620,NM_006735,NR_002795	chr7,chr7,chr7,chr7	-,-,-,+	HOXA1,HOXA1,HOXA2,HOXA11-AS1	-5723,-5723,950,83527
chr7:6387830-6388173	chr7	+	6387894	6388120	True	NM_006908,NM_001037163	chr7,chr7	+,-	RAC1,C7orf70	26005,520
chr19:36398818-36399037	chr19	+	36398817	36398881	True	NM_001007469,NM_003332,NM_001173514,NM_001173515,NR_033390,NM_198125,NM_139239,NM_014266	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,-,-,-,-,-,+	HCST,TYROBP,TYROBP,TYROBP,TYROBP,TYROBP,NFKBID,HCST	-5486,380,380,380,380,380,-7265,-5486
chr16:31087823-31088396	chr16	+	31087875	31088409	True	NM_024706,NM_001172668,NM_014699	chr16,chr16,chr16	-,-,+	ZNF668,ZNF668,ZNF646	-2234,-3052,-2183
chr1:36183853-36184325	chr1	+	36183925	36184343	True	NM_017629,NM_152374	chr1,chr1	+,-	EIF2C4,C1orf216	89484,497
chr17:13506282-13507385	chr17	+	13506590	13507197	True	NR_003261,NM_006042	chr17,chr17	+,-	CDRT15P,HS3ST3A1	420617,-1346
chr19:42195473-42195723	chr19	+	42195506	42195699	True	NM_004363,NM_006890	chr19,chr19	+,-	CEACAM5,CEACAM7	16830,-3410
chr3:127312417-127314334	chr3	+	127312695	127314325	True	NM_004526,NM_001136053,NM_001142646	chr3,chr3,chr3	+,-,-	MCM2,TPRA1,TPRA1	2927,-3199,-3127
chr19:38802664-38803682	chr19	+	38803065	38803531	True	NM_001039673,NM_001145461,NM_001039671,NM_001039672,NM_001145462,NM_033520,NM_033557,NM_001145463,NM_004823	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,+,-,-,+	YIF1B,YIF1B,YIF1B,YIF1B,YIF1B,C19orf33,YIF1B,YIF1B,KCNK6	3125,2964,2964,3125,2964,-8312,-2556,3125,6952
chr19:58572351-58573791	chr19	+	58572510	58573617	True	NM_001164530,NM_001145543,NM_007134,NM_003436,NM_001164529,NM_001164527	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+	ZNF135,ZSCAN18,ZNF135,ZNF135,ZNF135,ZNF135	-1960,36166,-1960,-1960,-1960,-1960
chr1:16083177-16084321	chr1	+	16083271	16084280	True	NM_001024215,NM_001024216,NM_001089591,NM_017556	chr1,chr1,chr1,chr1	+,+,-,+	FBLIM1,FBLIM1,UQCRHL,FBLIM1	6713,7178,49965,974
chrX:134867161-134868041	chrX	+	134867279	134868022	True	NM_152582,NM_001017436	chrX,chrX	+,+	CT45A2,CT45A4	-1116,-1116
chrX:134867161-134868041	chrX	+	134884549	134885293	False	NM_001017436,NM_001017435	chrX,chrX	-,+	CT45A4,CT45A3	51497,-1112
chrX:134867161-134868041	chrX	-	134934926	134935669	False	NM_018666,NM_001017436	chrX,chrX	+,-	SAGE1,CT45A4	40115,1116
chrX:134867161-134868041	chrX	-	134952189	134952932	False	NM_001007551,NM_018666,NM_001172288	chrX,chrX,chrX	-,+,-	CT45A5,SAGE1,CT45A5	1112,22852,1112
chrX:134867161-134868041	chrX	-	134969438	134970182	False	NM_001017438,NM_018666	chrX,chrX	-,+	CT45A6,SAGE1	1112,5602
chr7:30511467-30512492	chr7	+	30511475	30512352	True	NM_006092,NR_002186	chr7,chr7	-,+	NOD1,DKFZP586I1420	6092,-101860
chr6:32074219-32076104	chr6_mcf_hap5	+	3454107	3455899	False	NM_138717,NM_019105	chr6_mcf_hap5,chr6_mcf_hap5	+,-	PPT2,TNXB	45152,1136
chr6:32074219-32076104	chr6_dbb_hap3	+	3353453	3355245	False	NM_138717,NM_019105	chr6_dbb_hap3,chr6_dbb_hap3	+,-	PPT2,TNXB	45156,1136
chr6:32074219-32076104	chr6	+	32074279	32076071	True	NM_138717,NM_019105	chr6,chr6	+,-	PPT2,TNXB	45157,1136
chr6:32074219-32076104	chr6_cox_hap2	+	3544941	3546733	False	NM_138717,NM_019105	chr6_cox_hap2,chr6_cox_hap2	+,-	PPT2,TNXB	45163,1136
chr7:20258686-20259715	chr7	+	20258809	20259651	True	NM_182762,NM_002214	chr7,chr7	-,+	MACC1,ITGB8	-1796,111073
chr7:149566836-149567082	chr7	+	149566840	149567106	True	NM_001100592,NM_145230,NR_027040	chr7,chr7,chr7	+,+,-	ATP6V0E2,ATP6V0E2,LOC401431	2950,2950,3895
chr5:179776033-179776610	chr5	+	179776055	179776516	True	NM_005110,NM_015455	chr5,chr5	-,+	GFPT2,CNOT6	3853,144900
chr8:69402741-69404689	chr8	+	69403162	69404374	True	NM_052958,NM_020361	chr8,chr8	+,-	C8orf34,CPA6	-160262,-744542
chr6:26250279-26250732	chr6	+	26250319	26250699	True	NM_003547,NM_021018,NM_003540,NM_003524	chr6,chr6,chr6,chr6	-,-,+,+	HIST1H4G,HIST1H3F,HIST1H4F,HIST1H2BH	-3114,186,-9717,1179
chr2:87037186-87038167	chr2	+	87037225	87037894	True	NM_001145873,NR_037931	chr2,chr2	-,+	CD8A,LOC100286979	-1706,51053
chr22:34317733-34317971	chr22	+	34317793	34317995	True	NM_133642,NM_000362,NM_004737	chr22,chr22,chr22	-,+,-	LARGE,TIMP3,LARGE	-1377,-1121042,-1377
chr1:33941562-33941794	chr1	+	33941580	33941792	True	NM_145238,NM_198040	chr1,chr1	+,-	ZSCAN20,PHC2	-3406,-100386
chr15:55554662-55556407	chr15	+	55555046	55556230	True	NM_004855,NM_004580,NM_183236,NM_183234	chr15,chr15,chr15,chr15	+,-,-,-	PIGB,RAB27A,RAB27A,RAB27A	54902,6411,6933,6310
chr5:148931612-148932164	chr5	+	148931640	148932088	True	NM_001892,NM_001001669,NM_001025105	chr5,chr5,chr5	-,+,-	CSNK1A1,ARHGEF37,CSNK1A1	-633,29046,-633
chr15:41524616-41524980	chr15	+	41524763	41525003	True	NM_152596,NM_007236	chr15,chr15	-,+	EXD1,CHP	-1868,-1384
chr12:109921185-109921475	chr12	+	109921186	109921520	True	NM_183415,NM_031954,NM_130466	chr12,chr12,chr12	+,-,+	UBE3B,KCTD10,UBE3B	-5798,-6031,-5798
chr1:114443583-114444752	chr1	+	114443843	114444493	True	NM_022836,NM_006594	chr1,chr1	+,-	DCLRE1B,AP4B1	3421,3298
chr14:60975411-60975809	chr14	+	60975419	60975804	True	NM_007374,NM_174978	chr14,chr14	+,-	SIX6,C14orf39	133,-22655
chr6:42896018-42896757	chr6	+	42896320	42896776	True	NM_006586,NM_001008739	chr6,chr6	+,-	CNPY3,C6orf226	83,-37766
chr14:55881311-55882881	chr14	+	55881386	55882921	True	NM_014924,NM_152231	chr14,chr14	-,+	ATG14,FBXO34	-2810,-142565
chr7:54827119-54827512	chr7	+	54827187	54827469	True	NM_182546,NM_001012456,NM_014302	chr7,chr7,chr7	+,-,-	VSTM2A,SEC61G,SEC61G	-217219,-248,-248
chr8:67579349-67579687	chr8	+	67579464	67579730	True	NM_019607,NM_001204173,NM_025054	chr8,chr8,chr8	+,+,-	C8orf44,C8orf44-SGK3,VCPIP1	56,56,-12
chr16:21255570-21255811	chr16	+	21255772	21255838	True	NM_003460,NM_145865	chr16,chr16	-,+	ZP2,ANKS4B	-32904,-10812
chr1:939038-939361	chr1	+	939061	939351	True	NM_005101,NM_021170,NM_001142467	chr1,chr1,chr1	+,-,-	ISG15,HES4,HES4	9495,-3509,-3509
chr5:121186018-121186817	chr5	+	121186017	121186710	True	NM_001178102,NM_177478	chr5,chr5	-,+	LOX,FTMT	226265,939
chr2:105045928-105046820	chr2	+	105045950	105046672	True	NR_015399,NR_037885	chr2,chr2	+,-	LOC150568,LOC100287010	4132,-21160
chr7:131422196-131422771	chr7	+	131422230	131422718	True	NM_005397,NM_013255	chr7,chr7	-,+	PODXL,MKLN1	-180854,-409686
chr1:41452565-41453742	chr1	+	41452692	41453484	True	NM_001905,NM_001168247	chr1,chr1	+,-	CTPS,SLFNL1	-7736,33963
chr1:180600482-180601246	chr1	+	180600574	180601142	True	NM_001135669,NM_032360,NM_004736	chr1,chr1,chr1	+,-,+	XPR1,ACBD6,XPR1	3,-128552,3
chr1:154155831-154156457	chr1	+	154155866	154156302	True	NM_001043352,NM_001043353,NM_001043351,NM_153649,NR_030600,NM_152263,NM_001127320	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,-,+	TPM3,TPM3,TPM3,TPM3,MIR190B,TPM3,UBAP2L	-141,-141,-141,-141,9975,8365,36352
chr13:20064037-20065887	chr13	+	20064335	20065599	True	NM_017520,NM_001141968	chr13,chr13	+,-	MPHOSPH8,TPTE2	142188,45360
chr12:54587485-54588316	chr12	+	54587489	54588094	True	NR_026656,NM_014311	chr12,chr12	+,-	LOC400043,SMUG1	-67685,-4732
chr15:29562136-29563845	chr15	+	29562185	29563591	True	NM_138704,NM_005503	chr15,chr15	-,+	NDNL2,APBA2	-168,-348396
chr14:77881835-77883121	chr14	+	77881979	77882619	True	NM_001010860,NM_001113475,NM_138791	chr14,chr14,chr14	+,-,-	SAMD15,C14orf148,C14orf148	-38281,6810,6663
chr19:35781339-35781757	chr19	+	35781453	35781791	True	NM_001199216,NM_152481,NM_021175,NM_080600,NM_002361	chr19,chr19,chr19,chr19,chr19	+,-,+,+,+	MAG,FAM187B,HAMP,MAG,MAG	1197,-61825,-8094,1197,1197
chr4:2247516-2248105	chr4	+	2247519	2248014	True	NM_001193282,NM_024511	chr4,chr4	+,-	LOC402160,HAUS3	172686,-3659
chr20:57608041-57608563	chr20	+	57608048	57608137	True	NR_037930,NR_037929,NM_006886,NM_016045,NM_001001977,NM_030773	chr20,chr20,chr20,chr20,chr20,chr20	-,-,-,-,-,+	SLMO2-ATP5E,SLMO2-ATP5E,ATP5E,SLMO2,ATP5E,TUBB1	9821,9821,-648,9821,-626,-13791
chr6:34102678-34103196	chr6	+	34102819	34103231	True	NM_002131,NM_000841	chr6,chr6	+,-	HMGA1,GRM4	101345,-1376
chr16:8763606-8765146	chr16	+	8763871	8765011	True	NM_020686,NM_015421	chr16,chr16	+,-	ABAT,TMEM186	3432,126554
chr2:158298453-158300437	chr2	+	158298514	158300451	True	NM_014568,NM_004288	chr2,chr2	+,-	GALNT5,CYTIP	-184227,203
chr11:2951724-2951983	chr11	+	2951876	2952002	True	NM_002555,NM_003311	chr11,chr11	+,-	SLC22A18,PHLDA2	-28416,-1226
chr17:45119647-45120787	chr17	+	45119693	45120516	True	NM_203400,NM_054022	chr17,chr17	-,+	RPRML,GOSR2	-63079,-119259
chr17:45119647-45120787	chr17	-	43602786	43603609	False	NR_002940,NR_037772	chr17,chr17	-,+	LRRC37A4,CRHR1	-4897,94100
chr9:130513931-130515807	chr9	+	130514015	130515649	True	NM_001142532,NM_001142533,NM_001142531,NM_001142534,NR_036055	chr9,chr9,chr9,chr9,chr9	-,-,-,-,+	SH2D3C,SH2D3C,SH2D3C,SH2D3C,MIR2861	9098,1984,9120,1962,32547
chr2:71217666-71218606	chr2	+	71217799	71218261	True	NM_144582,NM_024933	chr2,chr2	-,+	TEX261,ANKRD53	3790,-12275
chr5:755166-755554	chr5	+	755264	755520	True	NM_001166260,NM_007030	chr5,chr5	+,-	TRIP13,TPPP	137448,-61754
chr5:755166-755554	chr5	+	847780	847954	False	NM_001166260,NM_024786	chr5,chr5	+,-	TRIP13,ZDHHC11	45014,3197
chr5:34840340-34841074	chr5	+	34840365	34840838	True	NM_144725,NR_026591	chr5,chr5	+,-	TTC23L,RAD1	-1147,74943
chr17:42577980-42578639	chr17	+	42578038	42578467	True	NM_001466,NM_001002909,NR_036474	chr17,chr17,chr17	+,-,-	FZD2,GPATCH8,GPATCH8	56344,2542,2542
chr12:69137034-69138211	chr12	+	69137216	69138155	True	NM_018656,NR_033335	chr12,chr12	+,-	SLC35E3,SNORA70G	1780,-116061
chrX:48820428-48821699	chrX	+	48820813	48821281	True	NM_004979,NM_017602,NM_001136159,NM_001136158,NM_001167992,NM_001136157	chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,+,-	KCND1,OTUD5,OTUD5,OTUD5,PQBP1,OTUD5	7020,-5920,-5165,-5920,-65089,-5920
chrX:153410104-153410658	chrX	+	153410126	153410658	True	NM_020061,NM_001110792	chrX,chrX	+,-	OPN1LW,MECP2	-452,-46938
chrX:153410104-153410658	chrX	+	153448535	153449068	False	NM_001586,NM_000513,NM_001048181	chrX,chrX,chrX	-,+,+	TEX28,OPN1MW,OPN1MW2	74436,-501,-501
chrX:153410104-153410658	chrX	+	153485653	153486186	False	NM_001586,NM_000513,NM_001048181	chrX,chrX,chrX	-,+,+	TEX28,OPN1MW,OPN1MW2	37318,-501,-501
chr7:95025233-95025794	chr7	+	95025368	95025608	True	NM_145872,NM_000940	chr7,chr7	+,-	ASB4,PON3	89604,129
chr10:70230605-70231401	chr10	+	70230625	70231255	True	NM_030625,NM_001080449	chr10,chr10	+,-	TET1,DNA2	88861,529
chr4:183740770-183741266	chr4	+	183740870	183741289	True	NR_003612,NM_001012732	chr4,chr4	+,-	FAM92A3,DCTD	217528,97398
chr17:7472000-7472423	chr17	+	7472001	7472412	True	NM_001416,NR_002918,NR_037926,NR_002912,NR_002604,NM_015670,NM_001204510,NM_006942	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,+,+,-	EIF4A1,SNORA48,SENP3-EIF4A1,SNORA67,SNORD10,SENP3,EIF4A1,SOX15	3611,5618,-6748,8860,7716,-6748,3611,21133
chr8:98287070-98288608	chr8	+	98287464	98288649	True	NM_033512,NM_178812	chr8,chr8	-,+	TSPYL5,MTDH	1577,367757
chr6:109803401-109804142	chr6	+	109803826	109804029	True	NM_014797,NM_003080,NM_001164313	chr6,chr6,chr6	-,+,-	ZBTB24,SMPD2,ZBTB24	462,-41946,462
chr5:179126757-179127164	chr5	+	179126836	179127204	True	NM_001746,NM_001164444,NM_001024649	chr5,chr5,chr5	+,-,+	CANX,CBY3,CANX	-957,-18861,-957
chr16:69760870-69761377	chr16	+	69760873	69761187	True	NM_001025433,NM_000903,NM_199423,NM_001025434	chr16,chr16,chr16,chr16	-,-,+,-	NQO1,NQO1,WWP2,NQO1	-340,-340,35086,-340
chr12:57623071-57623857	chr12	+	57623078	57623673	True	NM_005412,NM_020142,NR_029415,NR_029416,NR_029417,NM_001166358,NM_001166359,NM_001166356,NM_001166357	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,-,+,+,+,+,+,+,+	SHMT2,NDUFA4L2,SHMT2,SHMT2,SHMT2,SHMT2,SHMT2,SHMT2,SHMT2	-108,10852,437,154,-108,154,437,-108,469
chr1:34630956-34631388	chr1	+	34631048	34631386	True	NM_052896,NM_032884	chr1,chr1	-,+	CSMD2,C1orf94	107,1237
chr19:37092299-37093550	chr19	+	37092407	37093526	True	NM_001145649,NM_032825,NM_001145650,NR_027239	chr19,chr19,chr19,chr19	-,+,-,-	ZNF529,ZNF382,ZNF529,ZNF529	2703,2694,2703,2703
chr5:145487011-145487627	chr5	+	145487392	145487553	True	NM_018989,NM_001029869	chr5,chr5	+,-	RBM27,PLAC8L1	95609,-3446
chrX:46309485-46310228	chrX	+	46309690	46310060	True	NM_001039891,NM_001129898,NM_001129899,NM_001129900,NM_017776	chrX,chrX,chrX,chrX,chrX	-,+,+,+,+	ZNF674,ZNF673,ZNF673,ZNF673,ZNF673	94882,-3125,-3125,-3125,-3125
chr1:227920940-227921722	chr1	+	227921141	227921739	True	NR_024485,NM_053052,NR_024486,NM_001161465,NM_023007	chr1,chr1,chr1,chr1,chr1	+,+,+,-,-	LOC100130093,SNAP47,LOC100130093,JMJD4,JMJD4	-4952,957,-4952,1423,1423
chr17:9863903-9865688	chr17	+	9864050	9865559	True	NM_003644,NM_004246	chr17,chr17	-,+	GAS7,GLP2R	-1284,-134726
chr2:73029308-73030085	chr2	+	73029480	73030111	True	NM_015189,NM_003124	chr2,chr2	-,+	EXOC6B,SPR	23116,84400
chr22:25355824-25356281	chr22	+	25356009	25356251	True	NM_001145206,NM_001001663	chr22,chr22	+,-	KIAA1671,TMEM211	67689,-20695
chr14:72431145-72431521	chr14	+	72431365	72431525	True	NM_004296,NM_012074	chr14,chr14	+,-	RGS6,DPF3	-31642,929334
chrX:230055-230802	chrY	+	180145	180597	False	NM_018390,NM_012227	chrY,chrY	+,-	PLCXD1,GTPBP6	-32136,340
chrX:230055-230802	chrX	+	230145	230597	True	NM_018390,NM_012227	chrX,chrX	+,-	PLCXD1,GTPBP6	-32136,340
chr18:56814317-56814718	chr18	+	56814326	56814732	True	NM_033280,NM_013435	chr18,chr18	+,-	SEC11C,RAX	-7252,125943
chr1:67629493-67630035	chr1	+	67629538	67629911	True	NM_001013674,NM_144701	chr1,chr1	-,+	C1orf141,IL23R	-35318,2257
chr1:160175671-160175978	chr1	+	160175836	160175978	True	NM_003768,NR_028106	chr1,chr1	+,-	PEA15,DCAF8	-767,56349
chr7:127227868-127228119	chr7	+	127227872	127228124	True	NM_024523,NM_020369,NM_001662	chr7,chr7,chr7	-,+,+	GCC1,FSCN3,ARF5	-2218,5564,281
chrX:48757661-48758336	chrX	+	48757775	48758350	True	NM_001032384,NM_001032381,NM_005834,NM_001032383,NM_001032382,NM_005710,NM_001167947,NM_001167989,NM_001167990,NM_144495,NM_001167992	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,-,+,+,+,-,+,+,+,+	PQBP1,PQBP1,TIMM17B,PQBP1,PQBP1,PQBP1,TIMM17B,PQBP1,PQBP1,PQBP1,PQBP1	-2298,-2642,-2349,-2642,-2642,-2298,-2349,-2642,-2624,-2642,-2062
chr9:130331598-130331855	chr9	+	130331620	130331698	True	NM_001032221,NM_022833,NM_001035534	chr9,chr9,chr9	+,-,-	STXBP1,FAM129B,FAM129B	42787,-265,9620
chr2:27426788-27427488	chr2	+	27426915	27427405	True	NM_016085,NR_028323,NM_021095,NM_001170795,NM_080592	chr2,chr2,chr2,chr2,chr2	+,-,-,+,+	C2orf28,SLC5A6,SLC5A6,C2orf28,C2orf28	7813,7820,7820,7813,7493
chr15:22547495-22547725	chr15	+	22547568	22547736	True	NR_027407,NR_033735	chr15,chr15	-,+	GOLGA8DP,REREP3	168042,-1054
chr5:139681333-139681992	chr5	+	139681333	139682005	True	NM_031467,NM_002622	chr5,chr5	+,-	SLC4A9,PFDN1	57781,735
chr1:31665487-31666074	chr1	+	31665595	31665753	True	NM_024522,NM_016505	chr1,chr1	-,+	NKAIN1,ZCCHC17	47039,104088
chr17:8767144-8769074	chr17	+	8767221	8768568	True	NM_004822,NM_001010855	chr17,chr17	+,-	NTN1,PIK3R6	156290,2476
chr10:124316634-124316841	chr10	+	124316673	124316760	True	NM_017579,NM_001010912,NM_004406,NM_007329	chr10,chr10,chr10,chr10	+,-,+,+	DMBT1,C10orf120,DMBT1,DMBT1	3420,142635,3420,3420
chr9:101985626-101985967	chr9	+	101985630	101986016	True	NM_006808,NR_024532,NM_033087	chr9,chr9,chr9	+,-,-	SEC61B,ALG2,ALG2	-1113,-1384,-1384
chr4:187110729-187111959	chr4	+	187110749	187111884	True	NM_207352,NM_021069	chr4,chr4	+,-	CYP4V2,SORBS2	789,-232879
chr9:19229194-19230031	chr9	+	19229314	19229854	True	NR_038064,NM_017925	chr9,chr9	-,+	PLIN2,DENND4C	-101710,60894
chr17:40429932-40430444	chr17	+	40430075	40430442	True	NM_012448,NM_003152	chr17,chr17	-,+	STAT5B,STAT5A	-1651,9122
chr8:66548937-66549197	chr8	+	66549029	66549252	True	NM_018120,NM_014637,NM_001145839	chr8,chr8,chr8	-,+,+	ARMC1,MTFR1,MTFR1	-2577,7635,7635
chr3:61236014-61236523	chr3	+	61236021	61236469	True	NM_002841,NM_001166243,NM_002012	chr3,chr3,chr3	+,-,-	PTPRG,FHIT,FHIT	310773,714,714
chr17:40022594-40024079	chr17	+	40023130	40024095	True	NM_018143,NM_152467	chr17,chr17	-,+	KLHL11,KLHL10	-1501,-29152
chr16:56226348-56227649	chr16	+	56226508	56227614	True	NM_020988,NR_026889,NR_027078,NM_138736	chr16,chr16,chr16,chr16	+,-,-,+	GNAO1,DKFZP434H168,LOC283856,GNAO1	-1316,873,-1502,-1316
chr17:7219259-7219563	chr17	+	7219264	7219540	True	NM_001970,NM_001143761,NM_004489,NM_001143760,NM_001143762	chr17,chr17,chr17,chr17,chr17	+,+,-,+,+	EIF5A,EIF5A,GPS2,EIF5A,EIF5A	-8459,-8027,-606,-8997,-7621
chr22:24304165-24304880	chr22	+	24304309	24304648	True	NM_001080843,NM_000854,NM_001084393	chr22,chr22,chr22	-,-,+	GSTT2B,GSTT2,DDTL	-941,-916,4377
chr22:24304165-24304880	chr22	-	24321058	24321397	False	NM_001355,NM_000854,NM_001084392	chr22,chr22,chr22	-,+,-	DDT,GSTT2,DDT	672,916,-4378
chr18:68097598-68097805	chr18	+	68097598	68097770	True	NM_173630,NM_004232	chr18,chr18	-,+	RTTN,SOCS6	-224636,-141512
chr7:107302158-107302400	chr7	+	107302161	107302429	True	NM_000441,NR_028137	chr7,chr7	+,-	SLC26A4,LOC286002	-1132,4
chr1:70227109-70228020	chr1	+	70227219	70228050	True	NM_020794,NM_017768	chr1,chr1	+,-	LRRC7,LRRC40	-1428,443369
chr11:57805496-57806754	chr11	+	57805686	57806396	True	NM_001005211,NM_001005186	chr11,chr11	-,+	OR9I1,OR6Q1	80578,-7319
chr15:77711076-77711563	chr15	+	77711079	77711603	True	NM_018200,NM_024776	chr15,chr15	+,-	HMG20A,PEAK1	1639,-133746
chr10:73606931-73607227	chr10	+	73607060	73607142	True	NM_001042466,NM_001042465,NM_002778,NM_001171936	chr10,chr10,chr10,chr10	-,-,-,+	PSAP,PSAP,PSAP,CDH23	3994,3994,3994,-35471
chr12:133405164-133405406	chr12	+	133405163	133405455	True	NM_001172557,NM_005895,NM_001170544	chr12,chr12,chr12	-,-,+	GOLGA3,GOLGA3,PGAM5	21,117,-117821
chr3:49400775-49401139	chr3	+	49400921	49400993	True	NM_201397,NM_022171,NM_000581	chr3,chr3,chr3	-,+,-	GPX1,TCTA,GPX1	-5130,48645,-5130
chr13:99634089-99634772	chr13	+	99634104	99634750	True	NM_001144072,NM_001130050,NM_001130048	chr13,chr13,chr13	+,-,-	UBAC2,DOCK9,DOCK9	217928,-3766,-3766
chr16:31712495-31713355	chr16	+	31712524	31713227	True	NR_027011,NR_024034	chr16,chr16	-,+	CSDAP1,KIAA0664L3	-131679,-649
chr11:19734568-19734783	chr11	+	19734622	19734824	True	NM_182964,NR_015384,NM_145117	chr11,chr11,chr11	+,-,+	NAV2,LOC100126784,NAV2	56,1372,56
chr1:160232091-160232304	chr1	+	160232101	160232307	True	NR_028105,NR_028104,NR_028106,NR_028103,NR_002190,NM_015726	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,+,-	DCAF8,DCAF8,DCAF8,DCAF8,SUMO1P3,DCAF8	61,61,20,61,54747,93
chr1:157740476-157742265	chr1	+	157740559	157742164	True	NM_030764,NM_018240	chr1,chr1	-,+	FCRL2,KIRREL	4815,220898
chr15:23033052-23033617	chr15	+	23033373	23033667	True	NM_001008892,NM_001184888,NM_030922,NM_001008860,NM_001008894,NM_001033028,NM_001184889	chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,-,-,-,+,-	NIPA2,NIPA2,NIPA2,NIPA2,NIPA2,CYFIP1,NIPA2	817,817,817,817,817,-77669,817
chr13:73636439-73638212	chr13	+	73636442	73638242	True	NM_001730,NM_014953	chr13,chr13	+,-	KLF5,DIS3	-3359,-280098
chr2:111143485-111144072	chr2	+	111143820	111144121	True	NR_037626,NR_027244	chr2,chr2	+,-	LOC100507334,LOC151009	-140658,-1707
chr2:111143485-111144072	chr2	-	110742533	110742834	False	NR_037627,NR_036225	chr2,chr2	+,-	LOC100288570,MIR4267	-37317,84837
chr8:142136949-142137568	chr8	+	142136981	142137559	True	NM_001080431,NM_014957	chr8,chr8	-,+	SLC45A4,DENND3	101172,1160
chr3:116145230-116146006	chr3	+	116145334	116145903	True	NR_015391,NM_002338	chr3,chr3	+,-	NCRNA00295,LSAMP	282731,18545
chr3:11888175-11889687	chr3	+	11888627	11889729	True	NM_138807,NM_003178	chr3,chr3	-,+	C3orf31,SYN2	-275,156132
chr10:43047608-43047975	chr10	+	43047614	43047958	True	NR_026827,NR_026777	chr10,chr10	+,-	LOC84856,ZNF37BP	-76726,372
chr8:24772744-24773266	chr8	+	24772837	24773278	True	NM_005382,NM_006158,NM_001105541	chr8,chr8,chr8	+,-,+	NEFM,NEFL,NEFM	-1614,40903,-433
chr11:86383250-86384734	chr11	+	86383606	86384704	True	NM_001014811,NM_007173,NM_001161586,NM_006680	chr11,chr11,chr11,chr11	-,+,-,-	ME3,PRSS23,ME3,ME3	-366,126786,72,-179
chr9:17574708-17575290	chr9	+	17574845	17575278	True	NM_003026,NM_017637	chr9,chr9	+,-	SH3GL2,BNC2	3674,-704059
chr2:234159589-234160132	chr2	+	234159736	234160109	True	NM_019850,NM_001190267,NM_001190266,NM_198890,NM_030803,NM_017974	chr2,chr2,chr2,chr2,chr2,chr2	-,+,+,+,+,+	NGEF,ATG16L1,ATG16L1,ATG16L1,ATG16L1,ATG16L1	-281785,107,107,107,107,107
chr12:54773578-54774701	chr12	+	54773693	54774655	True	NM_015481,NR_029894	chr12,chr12	-,+	ZNF385A,MIR148B	3876,-42744
chr17:43697310-43697744	chr17	+	43697420	43697598	True	NR_026680,NR_026901,NR_037772,NR_027295	chr17,chr17,chr17,chr17	+,-,+,+	MGC57346,LOC644172,CRHR1,MGC57346	113,-17672,111,382
chr15:58005246-58006130	chr15	+	58005428	58006019	True	NM_001018102,NM_015532,NM_170697,NR_027390	chr15,chr15,chr15,chr15	+,+,-,+	GRINL1A,GRINL1A,ALDH1A2,GRINL1A	-6588,-6588,300273,-6588
chr3:191300738-191300992	chr3	+	191300817	191300947	True	NM_001083308,NM_198152	chr3,chr3	+,-	PYDC2,UTS2D	-121916,-252492
chr7:143059069-143059284	chr7	+	143059093	143059161	True	NM_001010972,NM_001031690,NM_014690	chr7,chr7,chr7	+,-,-	ZYX,FAM131B,FAM131B	19198,729,62
chr10:52834340-52834679	chr10	+	52834347	52834621	True	NM_006258,NM_138933	chr10,chr10	+,-	PRKG1,A1CF	-164,-188912
chr11:9113923-9114135	chr11	+	9113929	9114184	True	NM_020974,NR_027713,NM_001170690	chr11,chr11,chr11	-,+,-	SCUBE2,KRT8P41,SCUBE2	-779,1725,-779
chr3:49238719-49239917	chr3	+	49239379	49239706	True	NM_178173,NM_001080528,NM_001135197	chr3,chr3,chr3	+,-,+	CCDC36,LOC646498,CCDC36	-3576,-10088,-2504
chr19:6482319-6483126	chr19	+	6482421	6482677	True	NM_174881,NM_024898	chr19,chr19	+,-	CRB3,DENND1C	-18213,-623
chr9:127269115-127269427	chr9	+	127269119	127269309	True	NM_004959,NM_001161808	chr9,chr9	-,+	NR5A1,GPR144	440,-55747
chr1:38325692-38325929	chr1	+	38325703	38325969	True	NM_198446,NM_005955	chr1,chr1	+,-	C1orf122,MTF1	-52281,-411
chr18:56885519-56885943	chr18	+	56885563	56885762	True	NM_013435,NM_001012512,NM_001012513,NM_002091	chr18,chr18,chr18,chr18	-,+,+,+	RAX,GRP,GRP,GRP	54926,1637,1637,1637
chr1:120056531-120057231	chr1	+	120056668	120057162	True	NM_000862,NR_036540	chr1,chr1	+,-	HSD3B1,LOC644242	-6893,84802
chr4:174102903-174104837	chr4	+	174103026	174104594	True	NM_017423,NM_001130689	chr4,chr4	+,-	GALNT7,HMGB2	-13186,150376
chr17:77029678-77031154	chr17	+	77029928	77031195	True	NM_198594,NM_138793,NM_030968,NM_198593	chr17,chr17,chr17,chr17	+,-,+,+	C1QTNF1,CANT1,C1QTNF1,C1QTNF1	-9728,-24029,-9728,-35
chr17:42736715-42737898	chr17	+	42736824	42737831	True	NM_001099225,NM_001145080	chr17,chr17	-,+	CCDC43,C17orf104	29385,-3125
chr4:103650819-103651274	chr4	+	103650867	103651265	True	NM_001008388,NM_005908	chr4,chr4	+,-	CISD2,MANBA	138869,30936
chr3:160479612-160480766	chr3	+	160479970	160480805	True	NM_139245,NM_002268	chr3,chr3	+,-	PPM1L,KPNA4	-6032,-196594
chr12:69326329-69326698	chr12	+	69326397	69326725	True	NM_001005502,NM_198320,NM_002392	chr12,chr12,chr12	-,-,+	CPM,CPM,MDM2	304,304,-124477
chr9:125704871-125705641	chr9	+	125704977	125705695	True	NM_012197,NM_020924	chr9,chr9	+,-	RABGAP1,ZBTB26	-1745,-11198
chr18:47795020-47795732	chr18	+	47795080	47795774	True	NM_145020,NM_001039535	chr18,chr18	-,+	CCDC11,SKA1	-2215,105617
chr15:63333557-63334393	chr15	+	63333822	63334194	True	NM_001018020,NM_001018007,NM_001018004,NM_001018005,NM_001018008,NM_000366,NM_001018006,NM_015920	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,-	TPM1,TPM1,TPM1,TPM1,TPM1,TPM1,TPM1,RPS27L	643,643,643,643,6441,643,643,115597
chr1:150510921-150511731	chr1	+	150511258	150511600	True	NM_001197320,NM_025008	chr1,chr1	-,+	MCL1,ADAMTSL4	40664,10297
chr22:38303391-38304398	chr22	+	38303457	38304239	True	NM_032561,NM_033386	chr22,chr22	-,+	C22orf23,MICALL1	45414,-1162
chr16:3352286-3353923	chr16	+	3352695	3353796	True	NM_153028,NM_033208	chr16,chr16	+,-	ZNF75A,TIGD7	1636,1701
chr2:131306109-131306602	chr2	+	131306120	131306642	True	NR_027313,NR_033930,NR_027314	chr2,chr2,chr2	-,-,-	LOC150527,LOC646743,LOC150527	879,896,876
chr2:131306109-131306602	chr2	-	131329247	131329769	False	NR_027313,NR_033930,NR_027314	chr2,chr2,chr2	+,+,+	LOC150527,LOC646743,LOC150527	-879,-896,-876
chr2:43873451-43874965	chr2	+	43873493	43874987	True	NM_001101330,NM_172069	chr2,chr2	-,+	LOC728819,PLEKHH2	28529,-9113
chr2:228733187-228734991	chr2	+	228733429	228734870	True	NM_025243,NM_178821	chr2,chr2	-,+	SLC19A3,WDR69	-150684,1456
chr10:102673034-102673298	chr10	+	102673080	102673346	True	NM_001136123,NR_024245,NM_018121,NM_176792	chr10,chr10,chr10,chr10	+,+,+,-	FAM178A,FAM178A,FAM178A,MRPL43	-805,-805,-805,73977
chr1:217310042-217310281	chr1	+	217310119	217310307	True	NM_001134285,NM_138796	chr1,chr1	-,+	ESRRG,SPATA17	840,494387
chr16:50189240-50190016	chr16	+	50189393	50190035	True	NM_001040285,NM_001040284,NM_001173984	chr16,chr16,chr16	+,+,-	PAPD5,PAPD5,BRD7	-2617,-2617,212862
chr3:127542246-127542706	chr3	+	127542280	127542698	True	NM_207335,NM_001003794,NM_007283	chr3,chr3,chr3	+,-,-	KBTBD12,MGLL,MGLL	99203,-229,-579
chr12:94837556-94837894	chr12	+	94837690	94837900	True	NM_001042399,NR_027035	chr12,chr12	-,+	CCDC41,LOC144486	15922,15878
chr6:109775915-109776203	chr6	+	109775933	109776163	True	NM_001159291,NM_022765,NM_003080	chr6,chr6,chr6	-,-,+	MICAL1,MICAL1,SMPD2	1077,1077,-14053
chr9:118247772-118249537	chr9	+	118248236	118249574	True	NM_017418,NM_002160	chr9,chr9	+,-	DEC1,TNC	-344190,-367750
chr16:31538684-31539585	chr16	+	31538714	31539530	True	NM_022744,NM_016633	chr16,chr16	-,+	C16orf58,AHSP	-19008,-16
chr13:48815871-48817684	chr13	+	48815880	48817650	True	NM_014166,NM_021999	chr13,chr13	-,+	MED4,ITM2B	-146640,-8671
chr2:69751607-69752495	chr2	+	69751857	69752513	True	NR_003705,NM_001153	chr2,chr2	-,+	SNORA36C,ANXA4	-4554,216613
chr17:7081566-7082101	chr17	+	7081590	7082024	True	NM_001671,NM_000018,NM_001197216	chr17,chr17,chr17	-,+,-	ASGR1,ACADVL,ASGR1	909,41128,909
chr17:2304990-2305318	chr17	+	2305064	2305294	True	NM_020310,NM_001098509	chr17,chr17	-,+	MNT,SGSM2	-806,-64307
chr16:89007979-89008365	chr16	+	89008170	89008262	True	NM_175931,NM_016209	chr16,chr16	-,+	CBFA2T3,TRAPPC2L	-562,-84715
chr1:161494338-161494729	chr1	+	161494404	161494776	True	NM_000569,NM_002155	chr1,chr1	-,+	FCGR3A,HSPA6	25092,-419
chr1:161494338-161494729	chr1	+	161576036	161576346	False	NM_000570,NR_024151	chr1,chr1	-,+	FCGR3B,HSPA7	24862,-238
chrX:48858122-48858556	chrX	+	48858348	48858456	True	NM_001163322,NM_207672,NM_020137	chrX,chrX,chrX	+,-,-	CCDC120,GRIPAP1,GRIPAP1	58059,269,269
chr12:54423613-54424117	chr12	+	54423804	54424068	True	NM_004503,NM_018953,NR_030753,NR_026658	chr12,chr12,chr12,chr12	+,+,+,-	HOXC6,HOXC5,MIR615,LOC100240735	-1672,2763,3665,51589
chr7:126880854-126881645	chr7	+	126880912	126881446	True	NR_028041,NM_000845,NM_001662	chr7,chr7,chr7	-,-,+	GRM8,GRM8,ARF5	2185,2185,346959
chr21:26772550-26774531	chr21	+	26772571	26773042	True	NR_024027,NR_001458	chr21,chr21	-,+	NCRNA00158,MIR155HG	31030,161414
chr10:45455556-45455875	chr10	+	45455578	45455900	True	NR_033842,NM_032023	chr10,chr10	-,+	LOC220980,RASSF4	-441,-411
chr20:43436147-43436439	chr20	+	43436160	43436439	True	NM_182970,NM_022358	chr20,chr20	-,+	RIMS4,KCNK15	2526,-61723
chr20:30192666-30192882	chr20	+	30192679	30192834	True	NM_181353,NR_036161,NM_001191,NM_002165	chr20,chr20,chr20,chr20	+,+,-,+	ID1,MIR3193,BCL2L1,ID1	257,2154,117873,257
chr1:33945132-33945829	chr1	+	33945268	33945709	True	NM_145238,NM_198040	chr1,chr1	+,-	ZSCAN20,PHC2	-7087,-104074
chr12:50790845-50791940	chr12	+	50790995	50791499	True	NR_033200,NM_052879,NM_001145475,NM_199190,NM_001170804,NM_001170803,NM_199188,NM_001170808	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,-,+,+,+,+,+	LARP4,LARP4,FAM186A,LARP4,LARP4,LARP4,LARP4,LARP4	3092,3092,-590,3092,3092,3092,3092,3092
chr1:228612897-228613808	chr1	+	228612907	228613323	True	NM_001024940,NM_003493,NM_001134855,NM_175055,NM_016102	chr1,chr1,chr1,chr1,chr1	-,-,-,+,-	TRIM17,HIST3H3,TRIM17,HIST3H2BB,TRIM17	-8324,35,-8324,32484,-8324
chr2:103353411-103354973	chr2	+	103353449	103354757	True	NM_144632,NM_032718	chr2,chr2	+,-	TMEM182,MFSD9	23732,-112
chr1:148595727-148596784	chr1	+	148596709	148596781	True	NM_001164262,NM_001102663	chr1,chr1	-,+	PPIAL4F,NBPF16	-394173,-19403
chr19:49997996-49999049	chr19	+	49998091	49998573	True	NR_001285,NR_026712,NR_000020,NR_000021,NM_012423,NR_000019,NR_000018,NM_001015,NR_029703	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,+,+,+,-	SNORD35B,RPL13AP5,SNORD33,SNORD32A,RPL13A,SNORD34,SNORD35A,RPS11,MIR150	2402,-7284,-4275,-4926,-7284,-3985,-3717,1060,5602
chr15:30831756-30832739	chr15	+	30832078	30832734	True	NM_148911,NR_026858	chr15,chr15	-,+	CHRFAM7A,FAM7A1	-146214,32023
chr15:30831756-30832739	chr15	+	32873607	32874020	False	NM_199357,NR_036650	chr15,chr15	+,-	ARHGAP11A,LOC100288615	33670,-47665
chr15:30831756-30832739	chr15	-	32759450	32759863	False	NR_027470,NM_199357	chr15,chr15	-,+	FAM7A2,ARHGAP11A	-32200,147827
chr15:30831756-30832739	chr15	-	30718070	30718483	False	NM_148911,NR_026858	chr15,chr15	-,+	CHRFAM7A,FAM7A1	-32206,146274
chr15:30831756-30832739	chr15	-	28968998	28969212	False	NR_033351,NR_026589	chr15,chr15	-,+	GOLGA8F,WHAMML2	-190855,13516
chr12:108080019-108080463	chr12	+	108080064	108080377	True	NM_012406,NM_007062	chr12,chr12	-,+	PRDM4,PWP1	74594,-525
chr3:179324285-179326138	chr3	+	179324467	179325941	True	NM_001199958,NM_002492,NM_177988,NM_020409,NM_001199957	chr3,chr3,chr3,chr3,chr3	+,+,-,-,+	NDUFB5,NDUFB5,MRPL47,MRPL47,NDUFB5	-1955,-1955,-2033,-2033,-1955
chr22:18959832-18960163	chr22	+	18959835	18960161	True	NR_002733,NM_016335	chr22,chr22	+,-	DGCR5,PRODH	-1859,-35769
chr22:18959832-18960163	chr22	-	20253607	20253933	False	NM_023004,NR_026919	chr22,chr22	-,+	RTN4R,LOC150197	1933,-59803
chr3:119813690-119814069	chr3	+	119813702	119814058	True	NM_002093,NM_001146156,NM_022002	chr3,chr3,chr3	-,-,+	GSK3B,GSK3B,NR1I2	-438,-438,-312196
chr4:3372913-3373681	chr4	+	3373057	3373348	True	NM_002337,NM_198227	chr4,chr4	-,+	LRPAP1,RGS12	160926,-1385
chr12:6643289-6643533	chr12	+	6643304	6643574	True	NM_001039670,NM_002046	chr12,chr12	-,+	IFFO1,GAPDH	21725,82
chr7:38315233-38315923	chr7	+	38315233	38315948	True	NM_001003806,NM_032016,NM_001003799	chr7,chr7,chr7	-,+,-	TARP,STARD3NL,TARP	-1985,-97354,-1985
chr4:13486515-13487810	chr4	+	13486746	13487829	True	NM_004249,NM_001017979,NM_001159601,NR_003132	chr4,chr4,chr4,chr4	-,-,-,+	RAB28,RAB28,RAB28,HSP90AB2P	-757,-757,-757,-151760
chr1:60378748-60380366	chr1	+	60378749	60379834	True	NM_000775,NM_015888	chr1,chr1	-,+	CYP2J2,HOOK1	12650,-98267
chr1:23812175-23813432	chr1	+	23812383	23813312	True	NR_033691,NM_001143778,NM_017707	chr1,chr1,chr1	+,-,-	C1orf213,ASAP3,ASAP3	-116730,-1633,-1633
chr14:20103269-20103996	chr22	+	16371207	16371377	False	NM_001005239,NR_001591	chr22,chr22	-,+	OR11H1,psiTPTE22	78487,711423
chr14:20103269-20103996	chr14	+	20103601	20103771	True	NM_001197287,NM_172194	chr14,chr14	-,+	OR11H2,OR4Q3	78780,111815
chr17:76840316-76841158	chr17	+	76840445	76841149	True	NM_030968,NM_025090	chr17,chr17	+,-	C1QTNF1,USP36	179101,-3476
chrX:91034870-91035085	chrY	+	4868890	4869080	False	NM_032971,NR_001540	chrY,chrY	+,-	PCDH11Y,TTTY23	-675,1242621
chrX:91034870-91035085	chrX	+	91034891	91035117	True	NM_032967,NM_004538	chrX,chrX	+,-	PCDH11X,NAP1L3	-682,1893615
chr6:151814140-151814702	chr6	+	151814275	151814647	True	NM_025059,NM_017909	chr6,chr6	+,-	C6orf97,RMND1	527,-40959
chr8:146176953-146178575	chr8	+	146177028	146177599	True	NM_001029976,NM_006958,NR_002807	chr8,chr8,chr8	-,-,+	ZNF16,ZNF16,TMED10P1	-754,-754,42651
chr12:70761139-70761405	chr12	+	70761250	70761448	True	NM_002837,NM_014505	chr12,chr12	-,+	PTPRB,KCNMB4	242226,-1239
chr11:60682584-60683115	chr11	+	60682608	60683134	True	NM_014502,NM_017870,NM_024092,NM_178031	chr11,chr11,chr11,chr11	-,+,+,+	PRPF19,TMEM132A,TMEM109,TMEM132A	-8547,8778,-1301,8778
chr6:152022441-152023057	chr6	+	152022713	152023100	True	NM_017909,NM_001122742	chr6,chr6	-,+	RMND1,ESR1	-249397,-11133
chr1:27648074-27648452	chr1	+	27648282	27648484	True	NR_037576,NM_004672,NR_037577,NM_032125,NR_033926,NR_037580	chr1,chr1,chr1,chr1,chr1,chr1	+,-,+,+,+,+	TMEM222,MAP3K6,TMEM222,TMEM222,LOC644961,TMEM222	151,44903,151,151,1880,151
chr5:6633198-6633445	chr5	+	6633227	6633311	True	NM_017755,NR_037947,NM_001193455,NM_001047	chr5,chr5,chr5,chr5	-,-,-,+	NSUN2,NSUN2,NSUN2,SRD5A1	212,212,212,188
chr8:143832755-143833052	chr8	+	143832882	143833074	True	NM_016647,NM_020427,NM_205545	chr8,chr8,chr8	+,-,-	C8orf55,SLURP1,LYPD2	-24312,-9053,928
chr15:73920598-73922091	chr15	+	73920690	73922114	True	NM_017455,NM_001161363,NM_001161364,NM_012428,NM_001024736	chr15,chr15,chr15,chr15,chr15	-,-,-,-,+	NPTN,NPTN,NPTN,NPTN,CD276	3689,3689,3689,3689,54507
chr10:52645364-52647231	chr10	+	52645375	52646756	True	NM_001098512,NM_138933,NM_138932,NM_014576,NM_001198820,NM_001198818,NM_001198819	chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,-,-,-,-,-,-	PRKG1,A1CF,A1CF,A1CF,A1CF,A1CF,A1CF	104188,48,48,48,48,48,48
chr22:37448230-37448873	chr22	+	37448413	37448901	True	NM_024681,NM_003312	chr22,chr22	+,-	KCTD17,TST	-685,-32922
chr1:226076710-226077279	chr1	+	226077011	226077273	True	NM_020997,NM_000120,NM_014698	chr1,chr1,chr1	-,+,-	LEFTY1,EPHX1,TMEM63A	-165,-64060,-6591
chr7:22866387-22867744	chr7	+	22866554	22867755	True	NR_003075,NM_019059	chr7,chr7	+,-	SNORD93,TOMM7	28476,-4133
chr1:197303769-197304854	chr1	+	197303805	197304570	True	NM_201253,NM_194314	chr1,chr1	+,-	CRB1,ZBTB41	-66536,-134133
chrX:105992989-105994628	chrX	+	105993326	105994448	True	NM_194463,NM_001171706	chrX,chrX	+,-	RNF128,RIPPLY1	-23490,152167
chr12:52886709-52886924	chr12	+	52886779	52886973	True	NM_002284,NM_005554	chr12,chr12	+,-	KRT86,KRT6A	-191181,258
chr12:52886709-52886924	chr12	+	52845813	52845863	False	NM_002284,NM_005555	chr12,chr12	+,-	KRT86,KRT6B	-150215,97
chr12:52886709-52886924	chr12	+	52867328	52867522	False	NM_173086,NM_002284	chr12,chr12	-,+	KRT6C,KRT86	97,-171730
chr9:31996959-31998556	chr9	+	31997183	31998613	True	NM_014314,NM_002197	chr9,chr9	-,+	DDX58,ACO1	527767,385987
chr2:128159339-128159550	chr2	+	128159346	128159542	True	NM_000312,NM_006609	chr2,chr2	+,-	PROC,MAP3K2	16453,-58576
chr3:50629814-50630797	chr3	+	50629894	50630782	True	NM_013324,NM_016173,NM_004635	chr3,chr3,chr3	-,+,+	CISH,HEMK1,MAPKAPK3	18530,-23043,23818
chr4:84456182-84456672	chr4	+	84456245	84456721	True	NM_032717,NM_139076	chr4,chr4	+,-	AGPAT9,FAM175A	931,-49955
chr1:2286095-2286450	chr1	+	2286348	2286444	True	NM_007033,NR_024489	chr1,chr1	+,-	RER1,LOC100129534	36769,-2248
chr12:56708667-56709153	chr12	+	56708711	56709151	True	NM_014255,NM_001190991,NM_016584	chr12,chr12,chr12	-,-,+	CNPY2,CNPY2,IL23A	1027,1027,23511
chr16:53085517-53087356	chr16	+	53085718	53087294	True	NR_033920,NM_025134	chr16,chr16	-,+	LOC643714,CHD9	-444831,1650
chr10:9801078-9801998	chr10	+	9801095	9801799	True	NR_027082,NM_001025077	chr10,chr10	-,+	SFTA1P,CELF2	1035128,1245459
chr9:42000004-42000955	chr9	+	42000204	42000720	True	NR_003670,NM_001012421	chr9,chr9	-,+	KGFLP2,ANKRD20A2	18914,367582
chr9:42000004-42000955	chr9	+	44383055	44383571	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	606664,-752325
chr9:42000004-42000955	chr9	-	46706318	46706834	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-3075588,-18803
chr9:42000004-42000955	chr9	+	46824962	46825478	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-3194232,-137447
chr10:129535035-129535282	chr10	+	129535170	129535262	True	NM_207426,NM_152311	chr10,chr10	+,-	FOXI2,CLRN3	275,155999
chr12:71314572-71315262	chr12	+	71314669	71315264	True	NM_002849,NM_003667	chr12,chr12	-,+	PTPRR,LGR5	-85,518548
chr19:48894523-48894743	chr19	+	48894537	48894619	True	NM_006801,NM_000836	chr19,chr19	-,+	KDELR1,GRIN2D	241,3512
chr11:113184027-113184673	chr11	+	113184028	113184584	True	NM_017868,NR_034101	chr11,chr11	+,-	TTC12,LOC100288346	666,-39405
chr19:17447941-17448181	chr19	+	17447946	17448176	True	NM_133644,NM_001195422,NM_001128855,NM_020959,NM_032620	chr19,chr19,chr19,chr19,chr19	+,+,+,-,+	GTPBP3,GTPBP3,GTPBP3,ANO8,GTPBP3	149,-2206,149,-2308,149
chrY:24658107-24658569	chrY	+	24658112	24658469	True	NM_004676,NR_001527	chrY,chrY	+,-	PRY,TTTY6	-21619,-70506
chrY:24658107-24658569	chrY	+	28132107	28132464	False	NR_002179,NR_002176	chrY,chrY	-,+	TTTY17C,TTTY3B	-801187,-257521
chrY:24658107-24658569	chrY	-	24220220	24220577	False	NM_001002758,NR_001527	chrY,chrY	-,+	PRY2,TTTY6	21627,70534
chrY:24658107-24658569	chrY	-	25829905	25830262	False	NR_001524,NM_020363	chrY,chrY	-,+	TTTY3,DAZ2	257557,-464363
chr2:17721695-17722515	chr2	+	17721724	17722556	True	NM_003385,NM_001099218	chr2,chr2	+,-	VSNL1,RAD51AP2	32,-22018
chrX:114425341-114426190	chrX	+	114425404	114426174	True	NM_001145346,NM_020871	chrX,chrX	+,-	RBMXL3,LRCH2	-1492,42511
chr5:173471724-173472630	chr5	+	173471781	173472587	True	NM_138369,NM_015980	chr5,chr5	-,+	BOD1,HMP19	-428115,136
chr14:103800378-103800603	chr14	+	103800430	103800612	True	NM_183004,NR_002964,NR_033938,NM_001969	chr14,chr14,chr14,chr14	+,+,-,+	EIF5,SNORA28,LOC100131366,EIF5	623,3573,-145065,4
chr3:150263419-150263636	chr3	+	150263418	150263611	True	NM_014445,NM_032025	chr3,chr3	-,+	SERP1,EIF2A	868,962
chr17:60487482-60488418	chr17	+	60487792	60488459	True	NR_027486,NM_181725	chr17,chr17	-,+	TBC1D3P2,METTL2A	-134776,12786
chr12:124196310-124196707	chr12	+	124196636	124196700	True	NM_012463,NM_001414	chr12,chr12	+,-	ATP6V0A2,EIF2B1	164,-78313
chr12:112204669-112204909	chr12	+	112204741	112204933	True	NR_015404,NM_001204889,NM_000690	chr12,chr12,chr12	-,+,+	C12orf47,ALDH2,ALDH2	75823,-101,-101
chr9:95945056-95946151	chr9	+	95945104	95945946	True	NM_004148,NM_006648	chr9,chr9	-,+	NINJ1,WNK2	-48534,1265
chr17:39134364-39135108	chr17	+	39134437	39135079	True	NM_033061,NM_182497	chr17,chr17	+,-	KRTAP4-7,KRT40	105379,8358
chr9:33235089-33236218	chr9	+	33235340	33236244	True	NM_014471,NM_001172415	chr9,chr9	+,-	SPINK4,BAG1	3951,28565
chr9:130855670-130856995	chr9	+	130855760	130857025	True	NM_001006643,NR_033374,NM_052901,NM_001006642	chr9,chr9,chr9,chr9	+,-,+,+	SLC25A25,LOC100289019,SLC25A25,SLC25A25	3810,24038,3791,-1683
chr15:75292697-75293321	chr15	+	75293068	75293320	True	NM_001178111,NM_017793,NM_001178112,NR_033660,NM_138967	chr15,chr15,chr15,chr15,chr15	+,-,+,+,+	SCAMP5,RPP25,SCAMP5,SCAMP5,SCAMP5	-5243,-43293,-5243,-5243,-5243
chr12:123267933-123268394	chr12	+	123268080	123268374	True	NM_032554,NM_201435,NM_032573,NR_027918	chr12,chr12,chr12,chr12	-,+,+,+	GPR81,CCDC62,CCDC62,CCDC62	-52951,-9068,-9068,-9068
chr2:37385055-37386079	chr2	+	37385407	37385921	True	NM_001135651,NR_037879,NM_002759	chr2,chr2,chr2	-,+,-	EIF2AK2,LOC100505876,EIF2AK2	-1217,37713,-1217
chr12:7270900-7271756	chr12	+	7270996	7271792	True	NR_026947,NM_016546,NM_031491	chr12,chr12,chr12	+,-,-	LOC283314,C1RL,RBP5	-10143,-9127,9724
chr3:121636255-121638159	chr3	+	121636591	121638082	True	NM_021082,NM_001023571	chr3,chr3	+,-	SLC15A2,IQCB1	-23475,-82665
chr2:178717731-178718057	chr2	+	178717739	178718070	True	NM_001077196,NM_152945	chr2,chr2	-,+	PDE11A,RBM45	35459,259111
chrX:131263650-131264068	chrX	+	131263654	131264102	True	NM_001042452,NM_194277	chrX,chrX	+,-	MST4,FRMD7	-106069,-1604
chr12:133196002-133196656	chr12	+	133196015	133196671	True	NM_174872,NM_174873,NM_170683,NM_170682,NM_012226,NM_016318,NM_001195520	chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,+,+,+,+,-	P2RX2,P2RX2,P2RX2,P2RX2,P2RX2,P2RX2,LOC645277	-663,-663,-663,-663,-663,-663,-8978
chr1:148008214-148009754	chr1	+	148009620	148009708	True	NM_001170755,NM_015383	chr1,chr1	+,-	NBPF15,NBPF14	548479,16190
chr18:271886-272521	chr18	+	272172	272542	True	NM_005131,NM_005151	chr18,chr18	-,+	THOC1,USP14	-4113,-113740
chrX:154691635-154693308	chrX	+	154691704	154693259	True	NR_036049,NM_001007524,NM_001007523,NM_012151,NM_080720,NR_036260,NR_036259,NM_001017991,NM_001017990	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,-,-,-,-,+,+,-,-	MIR1184-1,F8A3,F8A2,F8A1,H2AFB3,MIR1184-3,MIR1184-2,H2AFB2,H2AFB1	-4578,-3443,-3443,-3428,-2108,-4578,-4578,-2116,-2108
chrX:154691635-154693308	chrX	-	154606764	154608319	False	NR_036049,NM_001007524,NM_001007523,NM_012151,NM_080720,NR_036260,NR_036259,NM_001017991,NM_001017990	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,-,-,+,+	MIR1184-1,F8A3,F8A2,F8A1,H2AFB3,MIR1184-3,MIR1184-2,H2AFB2,H2AFB1	4579,3444,3444,3429,2108,4579,4579,2116,2108
chrX:154691635-154693308	chrX	-	154109699	154111208	False	NR_036049,NM_001007524,NM_001007523,NM_012151,NM_080720,NR_036260,NM_019863,NR_036259,NM_001017990	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,-,-,-,+	MIR1184-1,F8A3,F8A2,F8A1,H2AFB3,MIR1184-3,F8,MIR1184-2,H2AFB1	4576,3441,3441,3426,2108,4576,3420,4576,2108
chr7:99063539-99063739	chr7	+	99063593	99063787	True	NM_213603,NM_001198879,NM_001003714,NM_001039178,NM_001003713,NM_001013258,NM_004889	chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,-,-,-,-,+,-	ZNF789,ATP5J2-PTCD1,ATP5J2,ATP5J2,ATP5J2,ZNF789,ATP5J2	6727,87,87,87,87,6727,87
chr19:40033279-40034470	chr19	+	40033383	40034313	True	NM_152361,NM_153232,NM_182704	chr19,chr19,chr19	-,-,+	EID2B,EID2,SELV	-9889,-2545,-27681
chr19:18718720-18719780	chr19	+	18719003	18719725	True	NM_012109,NM_004750	chr19,chr19	+,-	TMEM59L,CRLF1	3956,-1343
chr11:76566882-76568164	chr11	+	76567213	76567877	True	NM_018367,NR_024042	chr11,chr11	+,-	ACER3,GUCY2E	4039,-134380
chr14:24035339-24036376	chr14	+	24035415	24036331	True	NR_023314,NM_003917	chr14,chr14	+,-	THTPA,AP1G2	-10268,998
chr16:88640085-88640489	chr16	+	88640132	88640255	True	NM_000101,NM_144604	chr16,chr16	-,+	CYBA,ZC3H18	77259,-3401
chr7:94550751-94551515	chr7	+	94550790	94551573	True	NM_001166163,NM_003919	chr7,chr7	+,-	PPP1R9A,SGCE	-11637,-265269
chr2:215673055-215673715	chr2	+	215673443	215673667	True	NM_000465,NM_001080500	chr2,chr2	-,+	BARD1,VWC2L	811,-397033
chr6:112404611-112406535	chr6	+	112404944	112406551	True	NM_001033564,NM_016262	chr6,chr6	+,-	C6orf225,TUBE1	2122,2251
chr1:161681927-161683133	chr1	+	161682029	161683171	True	NM_001184866,NM_001184867,NM_001184873,NM_001184872,NM_032738,NM_001184870,NM_001002901,NM_001184871,NR_002595	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,+,+,+,-	FCRLA,FCRLA,FCRLA,FCRLA,FCRLA,FCRLA,FCRLB,FCRLA,RPL31P11	-5318,-5318,-5318,-5318,-5318,-5318,9285,-5318,-26987
chr22:29977176-29977675	chr22	+	29977191	29977709	True	NM_181825,NM_001202502,NM_003634	chr22,chr22,chr22	+,-,-	NF2,NIPSNAP1,NIPSNAP1	21835,-106,25
chr1:226186575-226186815	chr1	+	226186574	226186790	True	NM_152608,NM_002107	chr1,chr1	-,+	C1orf55,H3F3A	326,63617
chr14:78085962-78086584	chr14	+	78086141	78086597	True	NM_031210,NM_004863	chr14,chr14	+,-	C14orf156,SPTLC2	87827,-3031
chr14:77426462-77428058	chr14	+	77426474	77427999	True	NM_194287,NM_024496	chr14,chr14	+,-	C14orf166B,IRF2BPL	-133800,67085
chr5:142150304-142150512	chr5	+	142150345	142150487	True	NM_015071,NM_001135608,NR_026696	chr5,chr5,chr5	+,+,-	ARHGAP26,ARHGAP26,FGF1	-104,-104,-72710
chr1:35490874-35491780	chr1	+	35491146	35491566	True	NM_024772,NM_007167	chr1,chr1	+,-	ZMYM1,ZMYM6	53405,6065
chr22:37096131-37097628	chr22	+	37096180	37097462	True	NM_006078,NM_000631	chr22,chr22	-,+	CACNG2,NCF4	1278,159567
chr14:24778990-24780118	chr14	+	24779154	24779942	True	NM_019839,NM_181657,NM_001164692,NM_001143919,NM_014430	chr14,chr14,chr14,chr14,chr14	+,+,+,+,-	LTB4R2,LTB4R,LTB4R2,LTB4R,CIDEB	-36,2370,-36,762,684
chr12:56840884-56841909	chr12	+	56841002	56841860	True	NM_003920,NM_012064,NM_207344	chr12,chr12,chr12	-,-,+	TIMELESS,MIP,SPRYD4	1390,6625,20440
chr21:45960537-45960941	chr21	+	45960749	45960852	True	NR_026548,NM_198691	chr21,chr21	+,-	C21orf90,KRTAP10-1	-23707,-671
chr11:62431399-62431948	chr11	+	62431586	62431798	True	NR_004390,NM_024099,NM_001085372,NM_001043229	chr11,chr11,chr11,chr11	+,-,+,+	SNORA57,C11orf48,C11orf83,METTL12	1095,7505,7327,980
chr19:46317573-46318191	chr19	+	46317618	46318128	True	NM_030785,NM_004497	chr19,chr19	-,+	RSPH6A,FOXA3	527,49389
chr18:37310394-37311062	chr18	+	37310601	37311078	True	NR_024391,NR_036202	chr18,chr18	-,+	LOC647946,MIR4318	20936,-2073565
chr8:12225993-12226511	chr8	+	12226096	12226486	True	NR_024044,NR_026789	chr8,chr8	-,+	DEFB109P1,FAM66A	31438,-6619
chr8:12225993-12226511	chr8	+	7819103	7819494	False	NR_003668,NR_027424	chr8,chr8	-,+	DEFB109P1B,FAM66E	35599,-6619
chr10:18431412-18432920	chr10	+	18431420	18432727	True	NM_001167945,NM_201596,NM_201597,NM_201593,NM_201572,NM_201571,NM_182543	chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,+,-	CACNB2,CACNB2,CACNB2,CACNB2,CACNB2,CACNB2,NSUN6	-1737,-1873,-1873,-1873,-1737,-1737,507874
chr5:180239158-180239828	chr5	+	180239168	180239833	True	NM_001114617,NM_001114618,NM_001114619,NR_027183,NM_002406,NM_001114620	chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,+,-,-	MGAT1,MGAT1,MGAT1,LOC729678,MGAT1,MGAT1	-2031,-2351,-8266,17125,-9120,-8266
chr17:39780385-39780648	chr17	+	39780481	39780681	True	NM_005801,NM_000422	chr17,chr17	+,-	EIF1,KRT17	64445,251
chr17:39780385-39780648	chr17	+	28898632	28898688	False	NM_206832,NR_015341	chr17,chr17	-,+	TMIGD1,LRRC37BP1	-237567,4794
chr7:54829201-54830942	chr7	+	54829289	54830909	True	NM_182546,NM_001012456,NM_014302	chr7,chr7,chr7	+,-,-	VSTM2A,SEC61G,SEC61G	-219321,-2350,-2350
chr19:20278346-20278571	chr19	+	20278414	20278476	True	NM_033196,NM_052852	chr19,chr19	-,+	ZNF682,ZNF486	-128137,-382
chr19:16178306-16178573	chr19	+	16178443	16178565	True	NM_001145160,NM_003290,NM_054113	chr19,chr19,chr19	+,+,-	TPM4,TPM4,CIB3	-178,8569,105771
chr7:64990609-64991471	chr7	+	64990716	64991504	True	NM_000181,NR_027392	chr7,chr7	-,+	GUSB,INTS4L2	455847,121272
chr7:64990609-64991471	chr7	-	64629776	64630564	False	NR_027393,NM_001007253	chr7,chr7	+,-	INTS4L1,ERV3	-28224,-162652
chr7:64990609-64991471	chr7	-	65140983	65141771	False	NM_000181,NR_027392	chr7,chr7	-,+	GUSB,INTS4L2	305587,-28257
chr7:64990609-64991471	chr11	+	77649871	77649928	False	NM_024684,NM_033547	chr11,chr11	+,-	C11orf67,INTS4	-117721,55846
chr1:85154237-85155722	chr1	+	85154264	85155628	True	NR_036561,NM_001166293,NM_001166295,NM_001166294,NM_001166417,NM_014021	chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,-,-,-	SPATA1,SSX2IP,SSX2IP,SSX2IP,SSX2IP,SSX2IP	-182342,662,573,662,573,662
chr10:135150035-135150430	chr10	+	135150207	135150433	True	NM_001145201,NM_015722	chr10,chr10	+,-	PRAP1,CALY	10410,92
chr13:31504350-31506002	chr13	+	31504391	31506014	True	NM_152325,NM_006644	chr13,chr13	+,-	C13orf26,HSPH1	819,230153
chr1:151829277-151831026	chr1	+	151829850	151830988	True	NR_024237,NM_182578	chr1,chr1	+,-	LOC100132111,THEM5	-18961,-3677
chr22:31796188-31797039	chr22	+	31796210	31797084	True	NM_032051,NM_004147	chr22,chr22	-,+	PATZ1,DRG1	-53961,-722
chr10:50747286-50748207	chr10	+	50747324	50747964	True	NM_020984,NM_000124	chr10,chr10	+,-	CHAT,ERCC6	69176,-177
chr17:44440403-44441640	chr17_ctg5_hap1	-	389228	390151	False	NM_006178,NM_001113738,NM_001039083,NM_016632,NM_001103154,NR_033799	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	-,+,+,+,+,-	NSF,ARL17A,ARL17B,ARL17A,ARL17B,NSFP1	-8613,1431,1460,1431,1460,-8675
chr17:44440403-44441640	chr17_ctg5_hap1	+	1515314	1516237	False	NM_016632	chr17_ctg5_hap1	-	ARL17A	-1430
chr17:44440403-44441640	chr17	+	44440592	44441515	True	NM_001039083,NM_001113738,NM_001103154,NM_016632,NR_033799	chr17,chr17,chr17,chr17,chr17	-,-,-,-,+	ARL17B,ARL17A,ARL17B,ARL17A,NSFP1	-1458,-1429,-1458,-1429,8663
chr17:44440403-44441640	chr17	+	44658517	44659440	False	NM_001113738,NR_033799,NM_016632,NM_006178	chr17,chr17,chr17,chr17	-,+,-,+	ARL17A,NSFP1,ARL17A,NSF	-1429,8659,-1429,8597
chr19:5916082-5916313	chr19	+	5916210	5916278	True	NR_034166,NM_004058,NM_080590	chr19,chr19,chr19	-,+,+	NDUFA11,CAPS,CAPS	-12186,-2068,-2068
chr15:40987933-40988163	chr15	+	40987932	40988063	True	NM_133487,NM_018145,NM_001164269,NM_001164270,NM_002875	chr15,chr15,chr15,chr15,chr15	+,-,+,+,+	RAD51,FAM82A2,RAD51,RAD51,RAD51	-657,59452,-606,-657,-657
chr6:167623409-167623760	chr6	+	167623415	167623685	True	NM_005299,NM_001145121	chr6,chr6	-,+	GPR31,TCP10L2	-52096,-39385
chr3:187455756-187456313	chr3	+	187455946	187456274	True	NM_001134738,NM_001130845,NM_001706,NR_034062	chr3,chr3,chr3,chr3	-,-,-,+	BCL6,BCL6,BCL6,LOC100131635	-3251,-1661,7289,-35844
chr3:11890684-11891212	chr3	+	11890716	11891006	True	NM_138807,NM_003178	chr3,chr3	-,+	C3orf31,SYN2	-2364,154855
chr19:54273666-54274005	chr19	+	54273757	54273845	True	NR_030221,NR_030222,NM_033297	chr19,chr19,chr19	+,+,-	MIR516A2,MIR519A2,NLRP12	-9421,-8210,38164
chr8:142014241-142014753	chr8	+	142014332	142014588	True	NM_153831,NM_005607,NM_014957,NM_001199649	chr8,chr8,chr8,chr8	-,-,+,-	PTK2,PTK2,DENND3,PTK2	-2920,-2920,124131,-2920
chr1:159141918-159142614	chr1	+	159141954	159142540	True	NM_001127173,NM_021189,NR_037870	chr1,chr1,chr1	+,+,-	CADM3,CADM3,LOC100131825	-591,-628,29722
chr2:43450963-43451294	chr2	+	43450972	43451343	True	NR_027251,NM_006887	chr2,chr2	+,-	LOC100129726,ZFP36L2	3006,2452
chr19:51586878-51587911	chr19	+	51586880	51587702	True	NM_022046,NM_014441	chr19,chr19	-,+	KLK14,SIGLEC9	18,40434
chr21:34178404-34179733	chr21	+	34178522	34179633	True	NM_001162496,NM_001162495,NM_019596,NR_024623	chr21,chr21,chr21,chr21	-,-,-,+	C21orf62,C21orf62,C21orf62,C21orf49	6477,6477,6477,-34162
chr15:100348066-100348446	chr15	+	100348084	100348415	True	NR_003260,NM_001130928	chr15,chr15	-,+	DNM1P46,MEF2A	-952,-174952
chr15:100348066-100348446	chr15	-	102284735	102285063	False	NM_152334,NM_001005326	chr15,chr15	-,+	TARSL2,OR4F6	-20090,60859
chr5:43108279-43108781	chr5	+	43108479	43108582	True	NM_003432,NR_034127	chr5,chr5	+,-	ZNF131,LOC100132356	13059,-41406
chr10:100178219-100178529	chr10	+	100178224	100178444	True	NM_014472,NM_032709	chr10,chr10	+,-	C10orf28,PYROXD2	-283894,-3246
chr14:101292347-101292551	chr14	+	101292347	101292593	True	NR_003531,NR_003530,NR_033360,NR_002766,NR_033358,NR_033359,NM_001134888	chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,+,+,+,-	MEG3,MEG3,MEG3,MEG3,MEG3,MEG3,RTL1	33,33,33,33,33,33,58641
chr12:57520444-57520913	chr12	+	57520507	57520953	True	NM_002332,NR_033659	chr12,chr12	+,-	LRP1,STAT6	1328,-15311
chr18:3220104-3220641	chr18	+	3220104	3220672	True	NM_019856,NM_006471,NM_003803	chr18,chr18,chr18	-,+,-	MYOM1,MYL12A,MYOM1	2,26855,2
chr4:185221021-185221299	chr4	+	185221216	185221285	True	NM_152683,NM_153343	chr4,chr4	+,-	CCDC111,ENPP6	349481,-82102
chr19:12473497-12474936	chr19	+	12473994	12474943	True	NM_003437,NM_030824	chr19,chr19	+,-	ZNF136,ZNF442	-200185,1582
chr4:1203047-1203540	chr4	+	1203090	1203460	True	NM_001199021,NR_033339,NR_024569	chr4,chr4,chr4	-,+,-	SPON2,C4orf42,LOC100130872	-340,39767,-340
chr1:155223724-155224082	chr1	+	155223863	155223975	True	NM_020897,NM_001171811,NM_006589,NM_005698,NM_198264,NM_052837,NM_001005742,NM_001005741	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,-,-,-,-,-	HCN3,GBA,FAM189B,SCAMP3,FAM189B,SCAMP3,GBA,GBA	23398,-9210,1349,8270,1349,8270,-9210,-9210
chr19:52838569-52839277	chr19	+	52838616	52839164	True	NM_001161427,NM_001161426,NM_001161425,NM_001102657,NM_173530	chr19,chr19,chr19,chr19,chr19	+,+,+,-,+	ZNF610,ZNF610,ZNF610,ZNF836,ZNF610	333,333,333,-163720,9517
chr17:73997471-73997787	chr17	+	73997485	73997731	True	NM_001258,NM_007292	chr17,chr17	+,-	CDK3,ACOX1	-549,-21970
chr5:32174888-32175697	chr5	+	32175052	32175583	True	NM_022130,NM_178140	chr5,chr5	-,+	GOLPH3,PDZD2	-627,-376072
chr1:70822133-70822631	chr1	+	70822420	70822510	True	NM_001031693,NM_030816,NM_001036645,NM_001036646,NR_027404	chr1,chr1,chr1,chr1,chr1	+,-,+,+,+	HHLA3,ANKRD13C,HHLA3,HHLA3,HHLA3	-1986,-2003,-1986,-1986,-1986
chr8:142239588-142240233	chr8	+	142239643	142240267	True	NM_014957,NM_001080431	chr8,chr8	+,-	DENND3,SLC45A4	-100974,-970
chr4:119759195-119759757	chr4	+	119759289	119759725	True	NM_001128933,NM_014822	chr4,chr4	+,-	SYNPO2,SEC24D	50270,-1963
chr19:14606150-14606578	chr19	+	14606157	14606469	True	NM_001146693,NM_202494,NM_202468,NM_005716,NM_202469,NM_202467,NM_202470	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,-,-,-,-,-	LOC100130932,GIPC1,GIPC1,GIPC1,GIPC1,GIPC1,GIPC1	-6450,525,525,525,525,525,525
chr20:45605317-45607049	chr20	+	45605406	45606989	True	NM_172110,NM_033550	chr20,chr20	+,-	EYA2,TP53RK	-82194,-287130
chr7:144050392-144051635	chr7	+	144050457	144051621	True	NM_005435,NM_001080413	chr7,chr7	+,-	ARHGEF5,NOBOX	867,49217
chr7:144050392-144051635	chr7	-	143992153	143992892	False	NR_002158,NR_033942,NR_002157	chr7,chr7,chr7	+,-,+	OR2A20P,LOC728377,OR2A9P	3573,-9057,3721
chr7:144050392-144051635	chr7	-	143893573	143894738	False	NM_001003702,NM_198495	chr7,chr7	-,+	ARHGEF35,CTAGE4	-782,-13078
chr1:1107398-1108562	chr1	+	1107409	1108608	True	NR_029834,NM_153254,NR_029957,NM_004195,NM_001130045,NR_029639	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,-,+,+	MIR200A,TTLL10,MIR429,TNFRSF18,TTLL10,MIR200B	-4217,6468,-3075,33531,677,-4976
chr3:3153825-3154593	chr3	+	3154073	3154462	True	NM_000564,NM_175728,NM_182916,NM_175725,NM_175724,NM_175727,NM_175726	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,+,-,-,-,-	IL5RA,IL5RA,TRNT1,IL5RA,IL5RA,IL5RA,IL5RA	-2015,-2015,14137,-2015,-2015,-2015,-2015
chr20:34742593-34742808	chr20	+	34742654	34742736	True	NM_012156,NR_027451	chr20,chr20	+,-	EPB41L1,LOC647979	-43,-103772
chr13:28562390-28563576	chr13	+	28562573	28563614	True	NM_001105577,NR_002162	chr13,chr13	-,+	PRHOXNB,ATP5EP2	55,-43281
chr17:18165098-18166497	chr17	+	18165103	18166413	True	NM_001144900,NM_002018,NM_148886,NM_139162	chr17,chr17,chr17,chr17	+,-,+,+	SMCR7,FLII,SMCR7,SMCR7	-1306,-3048,-730,-1306
chr16:14412945-14413987	chr16	+	14413301	14413921	True	NR_029854,NM_001134477	chr16,chr16	+,-	MIR365-1,PARN	-10217,310249
chr13:111836896-111837153	chr13	+	111836916	111837126	True	NM_001113513,NM_017664	chr13,chr13	+,-	ARHGEF7,ANKRD10	2046,-269500
chr19:42818840-42819892	chr19	+	42818990	42819631	True	NM_173633,NM_001145940	chr19,chr19	+,-	TMEM145,PAFAH1B3	-1564,-12038
chr16:11760676-11761583	chr16	+	11760827	11761629	True	NM_003498,NM_015914	chr16,chr16	+,-	SNN,TXNDC11	659,75076
chr5:15500849-15501195	chr5	+	15501024	15501216	True	NM_054027,NM_012304	chr5,chr5	-,+	ANKH,FBXL7	-629137,-771
chr8:32422932-32423591	chr8	+	32422931	32423553	True	NM_013964,NM_032664	chr8,chr8	+,-	NRG1,FUT10	-17255,907161
chr9:124328406-124328842	chr9	+	124328513	124328879	True	NR_003191,NM_032552	chr9,chr9	-,+	GGTA1,DAB2IP	-66207,519
chr11:18655937-18656157	chr11	+	18655990	18656074	True	NM_153347,NM_194285	chr11,chr11	+,-	TMEM86A,SPTY2D1	64276,0
chr1:111216134-111216598	chr1	+	111216367	111216567	True	NM_002232,NR_003599	chr1,chr1	-,+	KCNA3,CYMP	1138,-193030
chr22:25171558-25173524	chr22	+	25171767	25173494	True	NM_001008496,NR_001283	chr22,chr22	-,+	PIWIL3,TOP1P2	-1084,-11350
chr2:217273323-217273739	chr2	+	217273403	217273593	True	NM_014140,NM_020814,NM_001127207	chr2,chr2,chr2	+,-,+	SMARCAL1,MARCH4,SMARCAL1	3543,-36653,3879
chr20:36661492-36661850	chr20	+	36661530	36661897	True	NM_021215,NM_014657	chr20,chr20	+,-	RPRD1B,TTI1	50,-10
chr2:20205970-20206823	chr2	+	20206018	20206661	True	NR_033875,NM_002381	chr2,chr2	+,-	FLJ12334,MATN3	-137454,5845
chr1:110577934-110578794	chr1	+	110578027	110578767	True	NM_033088,NM_006492	chr1,chr1	+,-	FAM40A,ALX3	-837,34613
chr15:85195189-85196559	chr15	+	85195566	85196167	True	NR_004859,NM_032856,NM_021077,NM_205858	chr15,chr15,chr15,chr15	+,-,-,-	SCAND2,WDR73,NMB,NMB	-20927,1405,5686,5686
chr9:140134516-140134729	chr9	+	140134564	140134694	True	NM_006088,NM_001177317,NM_001001710,NM_080877,NM_001177316	chr9,chr9,chr9,chr9,chr9	+,+,-,+,+	TUBB2C,SLC34A3,FAM166A,SLC34A3,SLC34A3	1016,-9412,7582,-9236,-9412
chrX:153812474-153812709	chrX	+	153812537	153812601	True	NM_139250,NM_001327	chrX,chrX	+,+	CTAG1A,CTAG1B	816,816
chrX:153812474-153812709	chrX	-	153848338	153848402	False	NM_139250,NM_001327	chrX,chrX	-,-	CTAG1A,CTAG1B	-816,-816
chr12:101878568-101879872	chr12	+	101878712	101879916	True	NM_152323,NM_001177	chr12,chr12	+,-	SPIC,ARL1	-7442,-77140
chr17:73106522-73106777	chr17	+	73106544	73106773	True	NM_014595,NM_024585	chr17,chr17	-,+	NT5C,ARMC7	21155,-513
chr12:104850138-104850482	chr12	+	104850138	104850525	True	NM_006166,NM_001173982,NM_018413	chr12,chr12,chr12	-,+,+	NFYB,CHST11,CHST11	-318098,166,166
chr17:40020887-40021132	chr17	+	40020943	40021175	True	NM_018143,NM_152467	chr17,chr17	-,+	KLHL11,KLHL10	504,-26951
chr20:5291798-5293046	chr20	+	5291813	5293094	True	NM_144773,NR_029405	chr20,chr20	-,+	PROKR2,LOC643406	1972,158747
chr20:40245596-40246426	chr20	+	40245656	40246238	True	NM_032221,NM_022896	chr20,chr20	-,+	CHD6,LPIN3	945,-276155
chr7:64761482-64762956	chr7	+	64762260	64762695	True	NM_001007253,NM_007139	chr7,chr7	-,+	ERV3,ZNF92	-295136,76072
chr7:70600842-70601100	chr7	+	70600880	70601140	True	NM_022479,NR_037477	chr7,chr7	+,-	WBSCR17,MIR3914-1	-3142,171666
chr18:33645043-33646997	chr18	+	33645307	33646847	True	NM_018170,NM_018255	chr18,chr18	-,+	RPRD1A,ELP2	576,63039
chr17:73876532-73876784	chr17	+	73876546	73876754	True	NM_033452,NM_001080419	chr17,chr17	-,+	TRIM47,UNK	-1890,-95916
chr3:120621161-120622148	chr3	+	120621219	120622205	True	NM_173825,NM_014980	chr3,chr3	-,+	RABL3,STXBP5L	-159835,4844
chr7:116961913-116962355	chr7	+	116961948	116962317	True	NR_002332,NR_024047,NM_003391	chr7,chr7,chr7	+,-,-	ST7OT3,WNT2,WNT2	-139264,1077,1077
chr12:51594014-51594233	chr12	+	51594021	51594277	True	NM_002702,NM_001136264	chr12,chr12	-,+	POU6F1,DAZAP2	-2071,38230
chr11:88909386-88911348	chr11	+	88909390	88911327	True	NM_000842,NM_000372	chr11,chr11	-,+	GRM5,TYR	-112574,-19
chr3:51419905-51421684	chr3	+	51419922	51421727	True	NM_001171904,NM_006010,NM_013286	chr3,chr3,chr3	-,+,+	VPRBP,MANF,RBM15B	112341,964,6971
chr22:39855237-39856421	chr22	+	39855385	39856433	True	NM_002409,NM_194326	chr22,chr22	+,-	MGAT3,RPS19BP1	-2111,72477
chr1:196627848-196628774	chr1	+	196628260	196628790	True	NM_001014975,NM_000186,NM_198503	chr1,chr1,chr1	+,+,-	CFH,CFH,KCNT2	-7310,-7310,-50761
chr9:132403398-132403874	chr9	+	132403451	132403826	True	NM_014064,NM_017873,NM_001202403,NM_177999	chr9,chr9,chr9,chr9	+,-,-,-	METTL11A,ASB6,ASB6,ASB6	-15067,673,673,673
chr5:139556576-139557158	chr5	+	139556690	139557196	True	NM_002622,NM_032412	chr5,chr5	-,+	PFDN1,C5orf32	125543,-2089
chrX:72099093-72100050	chrX	+	72099303	72099472	True	NM_001080851,NM_033053	chrX,chrX	-,-	DMRTC1B,DMRTC1	-3681,-3681
chrX:72099093-72100050	chrX	-	72061026	72061195	False	NM_001080851,NM_033053	chrX,chrX	+,+	DMRTC1B,DMRTC1	3680,3680
chr19:22816695-22817110	chr19	+	22816845	22817003	True	NM_020855,NM_001080409	chr19,chr19	+,-	ZNF492,ZNF99	122,135831
chr2:228732082-228733014	chr13	-	51653137	51653197	True	NR_003923,NM_145019	chr13,chr13	-,+	GUCY1B2,FAM124A	-12844,143309
chr15:76033490-76034858	chr15	+	76033734	76034820	True	NM_175881,NR_024595	chr15,chr15	+,-	ODF3L1,DNM1P35	-17466,-1232
chr12:62860991-62861975	chr12	+	62861201	62861702	True	NM_175895,NM_015026	chr12,chr12	-,+	C12orf61,MON2	135562,-655
chr8:41345908-41346220	chr8	+	41345915	41346269	True	NM_001174124,NM_016099,NM_152568,NM_001002296	chr8,chr8,chr8,chr8	+,+,-,+	GOLGA7,GOLGA7,NKX6-3,GOLGA7	1811,1811,158659,1903
chr20:43726772-43727087	chr20	+	43726815	43727133	True	NM_002251,NM_002638	chr20,chr20	-,+	KCNS1,PI3	2670,76406
chr19:16581542-16582203	chr19	+	16581567	16582157	True	NM_021235,NM_032207	chr19,chr19	-,+	EPS15L1,C19orf44	655,25047
chr4:9783963-9784175	chr4	+	9784033	9784167	True	NR_031688,NM_000798	chr4,chr4	-,+	MIR548I2,DRD5	-226096,-826
chr2:50555080-50556970	chr2	+	50555232	50556588	True	NM_138735,NM_006872	chr2,chr2	-,+	NRXN1,GTF2A1L	18356,-1710346
chr16:67262886-67263522	chr16	+	67262971	67263547	True	NM_014187,NM_012163,NM_001004055	chr16,chr16,chr16	+,-,-	TMEM208,LRRC29,LRRC29	-2006,-2250,-2070
chr21:45210164-45211678	chr21	+	45210298	45211222	True	NM_000100,NM_003683	chr21,chr21	-,+	CSTB,RRP1	-14039,-931
chr1:44483237-44483769	chr1	+	44483397	44483775	True	NM_152499,NM_006934,NM_201649	chr1,chr1,chr1	+,-,-	CCDC24,SLC6A9,SLC6A9	-26168,-400,-400
chr7:72298955-72299300	chr7	+	72298955	72299258	True	NR_001588,NR_024110,NR_024111,NR_024109,NM_001145441,NM_001145440	chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,-,-	SBDSP1,SBDSP1,SBDSP1,SBDSP1,TYW1B,TYW1B	693,693,693,693,-142,-142
chr7:72298955-72299300	chr7	-	66461381	66461442	False	NM_018264,NM_016038	chr7,chr7	+,-	TYW1,SBDS	374,-793
chr20:42358690-42359074	chr20	+	42358844	42358962	True	NM_001008901,NM_176791,NM_002466	chr20,chr20,chr20	-,-,+	GTSF1L,GTSF1L,MYBL2	-3202,-3202,-63191
chr1:27691460-27692049	chr1	+	27691682	27691986	True	NM_032872,NM_003665,NM_004672,NM_173452	chr1,chr1,chr1,chr1	+,-,-,-	SYTL1,FCN3,MAP3K6,FCN3	-23250,9379,1401,9379
chr6:143925157-143926222	chr6	+	143925285	143926131	True	NM_001100166,NR_027113,NM_014721	chr6,chr6,chr6	+,-,+	PHACTR2,LOC285740,PHACTR2	3185,-34809,3185
chr10:65928896-65929580	chr10	+	65929044	65929598	True	NM_032776,NM_001001330	chr10,chr10	-,+	JMJD1C,REEP3	-703322,-647972
chr1:15853644-15854648	chr1	+	15853751	15854581	True	NM_015291,NM_032996,NM_001229	chr1,chr1,chr1	+,-,-	DNAJC16,CASP9,CASP9	-450,-2466,-2811
chrY:20898137-20900079	chrY	+	20898158	20900110	True	NR_001530,NM_001001877,NR_002159	chrY,chrY,chrY	+,-,+	TTTY9A,HSFY2,TTTY9B	-6449,35545,-6449
chrY:20898137-20900079	chrY	-	20744064	20746016	False	NR_001530,NR_002159,NR_003510	chrY,chrY,chrY	-,-,+	TTTY9A,TTTY9B,HSFY1	6449,6449,-35542
chr13:28714672-28715300	chr13	+	28714878	28715116	True	NR_029383,NM_175854	chr13,chr13	-,+	LOC100288730,PAN3	-1567,-2299
chr19:17444087-17444630	chr19	+	17444130	17444612	True	NM_133644,NM_020959,NM_001128855,NM_001195422,NM_032620	chr19,chr19,chr19,chr19,chr19	+,-,+,+,+	GTPBP3,ANO8,GTPBP3,GTPBP3,GTPBP3	3713,1076,3713,1178,3713
chr2:25896719-25897136	chr2	+	25896762	25897076	True	NM_183360,NM_183361,NM_033147,NM_016131,NM_021907,NM_033148	chr2,chr2,chr2,chr2,chr2,chr2	-,-,-,+,-,-	DTNB,DTNB,DTNB,RAB10,DTNB,DTNB	-259,-259,-259,359652,-259,-259
chr16:33490040-33491503	chr16	+	33490151	33491117	True	NR_033866,NM_001205265	chr16,chr16	-,+	LOC390705,TP53TG3B	-191449,-228085
chr16:89725633-89726010	chr16	+	89725659	89725807	True	NM_002768,NM_001083314,NM_153025	chr16,chr16,chr16	-,-,+	CHMP1A,CHMP1A,C16orf55	-1530,-1530,-1500
chr11:46407417-46407678	chr11	+	46407448	46407726	True	NM_000741,NM_002391,NM_001012334,NM_001012333	chr11,chr11,chr11,chr11	-,+,+,+	CHRM4,MDK,MDK,MDK	431,-4280,-4881,-4196
chr6:88116962-88117682	chr6	+	88117173	88117579	True	NM_001031743,NM_198568	chr6,chr6	+,-	C6orf165,GJB7	110,-78177
chr16:71528090-71528545	chr16	+	71528133	71528267	True	NM_005769,NM_006961	chr16,chr16	+,-	CHST4,ZNF19	31755,-4879
chr3:183978891-183979139	chr3	+	183978948	183979078	True	NM_033259,NM_014693	chr3,chr3	-,+	CAMK2N2,ECE2	223,-11554
chr5:71015613-71015933	chr5	+	71015676	71015914	True	NR_033968,NM_004291	chr5,chr5	-,+	LOC100049076,CARTPT	-460554,-737
chr22:39015419-39016128	chr22	+	39015655	39016159	True	NM_001002880,NM_001013647	chr22,chr22	+,-	CBY1,LOC646851	36498,36525
chr16:57125428-57125641	chr16	+	57125522	57125592	True	NM_152727,NM_024946	chr16,chr16	+,-	CPNE2,FAM192A	862,94434
chr12:118454214-118454424	chr12	+	118454229	118454311	True	NM_018639,NM_181578,NM_007370,NM_001130113,NM_001130112	chr12,chr12,chr12,chr12,chr12	-,+,+,+,+	WSB2,RFC5,RFC5,RFC5,RFC5	44690,196,196,196,196
chr3:64193887-64195631	chr3	+	64193933	64195659	True	NM_198859,NM_001128149	chr3,chr3	-,+	PRICKLE2,ATXN7	15522,-240572
chrX:72783400-72784016	chrX	+	72783511	72784031	True	NR_029423,NM_001039840	chrX,chrX	-,+	LOC139201,CHIC1	-590,-578
chr21:38445731-38445936	chr21	+	38445779	38445975	True	NM_003316,NM_153681,NM_153682,NR_028352,NM_001001894	chr21,chr21,chr21,chr21,chr21	+,-,-,-,+	TTC3,PIGP,PIGP,PIGP,TTC3	9271,-676,-321,-321,-259
chr2:73443990-73444371	chr2	+	73444021	73444422	True	NM_006062,NM_032319	chr2,chr2	+,-	SMYD5,C2orf7	-2713,15987
chr5:151150406-151150693	chr5	+	151150499	151150689	True	NM_005754,NM_198395,NM_004045	chr5,chr5,chr5	+,+,-	G3BP1,G3BP1,ATOX1	786,786,-12289
chr7:149191499-149192547	chr7	+	149191829	149192504	True	NR_036573,NM_001163474,NM_152557	chr7,chr7,chr7	+,-,-	LOC155060,ZNF746,ZNF746	-209508,2444,2444
chr5:114597637-114598186	chr5	+	114597823	114598136	True	NM_005023,NM_001284	chr5,chr5	-,+	PGGT1B,AP3S1	483,579482
chr15:54042051-54043969	chr15	+	54042050	54043974	True	NM_182758,NM_001080534	chr15,chr15	-,+	WDR72,UNC13C	7935,261126
chr9:75530691-75531094	chr9	+	75530721	75531069	True	NM_000700,NM_000689	chr9,chr9	+,-	ANXA1,ALDH1A1	235711,37214
chr1:245028448-245030143	chr1	+	245028470	245030163	True	NM_004501,NM_198076,NM_031844	chr1,chr1,chr1	-,+,-	HNRNPU,FAM36A,HNRNPU	-643,-29882,-643
chr16:66585447-66586702	chr16	+	66585550	66586652	True	NM_001204098,NM_001204099,NM_001172645,NM_016951,NM_001172643,NM_001202509,NM_001040138,NM_001172644,NM_004614,NM_181641,NM_181640,NM_016326	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,-,+,-,+,+,-,-,+,+,+	CKLF-CMTM1,CKLF-CMTM1,TK2,CKLF,TK2,CKLF-CMTM1,CKLF,TK2,TK2,CKLF,CKLF,CKLF	75,75,-1235,75,-1356,75,75,-1235,-1235,75,75,75
chr1:46690289-46690727	chr1	+	46690292	46690776	True	NM_001013615,NR_024332	chr1,chr1	+,-	C1orf190,POMGNT1	-21337,-4315
chr2:128778943-128780699	chr2	+	128779294	128780359	True	NM_024545,NM_020120,NM_001145928	chr2,chr2,chr2	-,+,-	SAP130,UGGT1,SAP130	4571,68394,4571
chr11:65340636-65340977	chr11	+	65340659	65341007	True	NM_001099409,NM_006396,NM_152832,NM_021070,NM_001098785,NM_001098784	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,-,+,+	EHBP1L1,SSSCA1,FAM89B,LTBP3,FAM89B,FAM89B	2501,-2767,-890,-14960,-890,-890
chr11:777946-778206	chr11	+	777991	778093	True	NM_006755,NM_182612	chr11,chr11	+,-	TALDO1,PDDC1	-30610,-504
chr18:3361341-3361718	chr18	+	3361421	3361716	True	NM_019856,NM_174886	chr18,chr18	-,+	MYOM1,TGIF1	-141315,50355
chr3:20058053-20059746	chr3	+	20058125	20059530	True	NM_003884,NR_027694	chr3,chr3	+,-	KAT2B,C3orf48	21993,-4360
chr6:5261247-5261478	chr6	+	5261296	5261506	True	NM_006567,NM_020408,NM_001164840,NM_001164841	chr6,chr6,chr6,chr6	+,-,-,-	FARS2,LYRM4,LYRM4,LYRM4	77,-124,-124,-124
chr7:55711079-55712909	chr7	+	55711833	55712925	True	NM_182633,NR_027340	chr7,chr7	+,-	ZNF713,FKBP9L	267405,42850
chr10:120938395-120938641	chr10	+	120938441	120938659	True	NM_005308,NM_014098,NM_006793	chr10,chr10,chr10	+,-,-	GRK5,PRDX3,PRDX3	28537,-96,-96
chr12:122359994-122361709	chr12	+	122360305	122361582	True	NM_001178003,NM_144668,NM_001171993	chr12,chr12,chr12	+,+,-	WDR66,WDR66,HPD	-3893,-3876,-33788
chr11:73493769-73494692	chr11	+	73494601	73494713	True	NM_198896,NM_016055	chr11,chr11	-,+	RAB6A,MRPL48	-22400,4203
chr22:42086789-42088506	chr22	+	42086803	42087758	True	NM_001003796,NM_001142964,NM_152513,NM_005008	chr22,chr22,chr22,chr22	-,+,+,-	NHP2L1,C22orf46,MEI1,NHP2L1	-1890,-307,7759,-8247
chr4:2469327-2469634	chr4	+	2469462	2469636	True	NM_001172657,NM_001185010,NM_002938,NM_001185009	chr4,chr4,chr4,chr4	-,+,+,+	ZFYVE28,RNF4,RNF4,RNF4	-49092,1158,1158,1543
chr18:22011599-22013202	chr18	+	22012157	22012905	True	NM_018439,NM_080597	chr18,chr18	+,-	IMPACT,OSBPL1A	-5599,-34367
chr1:103503943-103505424	chr1	+	103504059	103505460	True	NM_017619,NM_001190709	chr1,chr1	+,-	RNPC3,COL11A1	563117,68652
chr17:1182700-1183157	chr17	+	1182963	1183153	True	NM_001159746,NM_001164405,NM_172367	chr17,chr17,chr17	-,+,+	ABR,BHLHA9,TUSC5	-92347,-9156,-57
chr11:60688838-60689413	chr11	+	60688906	60689160	True	NM_014502,NM_017870,NM_024092,NM_178031	chr11,chr11,chr11,chr11	-,+,+,+	PRPF19,TMEM132A,TMEM109,TMEM132A	-14845,2752,-7586,2752
chr1:62900564-62900873	chr1	+	62900592	62900762	True	NM_001017415,NM_001017416,NM_181712,NM_003368	chr1,chr1,chr1,chr1	+,+,-,+	USP1,USP1,KANK4,USP1	1212,1212,-115509,1620
chr17:74497915-74499108	chr17	+	74498013	74499097	True	NR_033357,NM_024599	chr17,chr17	+,-	PRCD,RHBDF2	24570,-504
chr20:47894982-47895196	chr20	+	47895020	47895244	True	NR_003605,NR_003604,NR_002433,NR_003606,NR_003695,NR_036658,NR_036659,NM_021035,NR_003030	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,+,+,+,+,+,+,-,+	NCRNA00275,NCRNA00275,SNORD12C,NCRNA00275,SNORD12B,NCRNA00275,NCRNA00275,ZNFX1,SNORD12	-356,-356,237,-356,1605,-356,10,-264,1975
chr11:36310068-36311035	chr11	+	36310475	36310875	True	NM_014186,NM_001101653,NM_001160167	chr11,chr11,chr11	-,-,+	COMMD9,COMMD9,PRR5L	174,174,6849
chr1:2936569-2937041	chr1	+	2936762	2936958	True	NM_080431,NR_015440	chr1,chr1	+,-	ACTRT2,FLJ42875	1087,47381
chr11:66237564-66238748	chr11	+	66237597	66238624	True	NM_170739,NM_145065,NM_130443,NM_001098510,NM_005700	chr11,chr11,chr11,chr11,chr11	-,+,+,+,+	MRPL11,PELI3,DPP3,PELI3,DPP3	-31287,-3313,9255,-3313,9255
chr22:21992720-21993011	chr22	+	21992996	21993056	True	NM_152612,NM_001017964,NM_022044	chr22,chr22,chr22	+,-,+	CCDC116,YDJC,SDF2L1	-5961,-8656,3485
chrX:101802886-101803296	chrX	+	101802952	101803252	True	NR_002216,NM_021992	chrX,chrX	+,-	NXF4,TMSB15A	1640,-31253
chr11:47470310-47470645	chr11	+	47470315	47470473	True	NM_152264,NM_032645,NM_005055	chr11,chr11,chr11	+,-,-	SLC39A13,RAPSN,RAPSN	-40320,307,307
chr11:64684952-64685322	chr11	+	64684957	64685218	True	NM_015104,NM_006244	chr11,chr11	-,+	ATG2A,PPP2R5B	-235,6924
chr7:41731347-41732831	chr7	+	41731351	41732779	True	NM_002192,NR_027119,NR_027118	chr7,chr7,chr7	-,+,+	INHBA,LOC285954,LOC285954	9977,766,734
chr5:134779859-134780083	chr5	+	134779869	134780043	True	NM_145282,NM_130848,NM_001099221	chr5,chr5,chr5	+,-,-	SLC25A48,C5orf20,TIFAB	390321,3045,8096
chr5:132150667-132150915	chr5	+	132150726	132150906	True	NM_175873,NM_133456	chr5,chr5	+,-	ANKRD43,SHROOM1	-1744,11146
chr7:2444532-2444799	chr7	+	2444587	2444672	True	NM_018641,NM_013321	chr7,chr7	+,-	CHST12,SNX8	-1379,-90488
chr1:33115558-33115905	chr1	+	33115656	33115924	True	NM_001135255,NM_001135256,NM_178547,NM_005610	chr1,chr1,chr1,chr1	+,+,-,+	RBBP4,RBBP4,ZBTB8OS,RBBP4	824,1034,311,824
chr12:50367484-50368108	chr12	+	50367497	50368127	True	NM_001126103,NM_001652	chr12,chr12	-,+	RACGAP1,AQP6	51230,-928
chr1:48281873-48282218	chr1	+	48281886	48282160	True	NM_001194986,NM_004474	chr1,chr1	-,+	LOC388630,FOXD2	180452,-380248
chr15:50640162-50640741	chr15	+	50640257	50640360	True	NM_002041,NR_024490,NM_181427,NM_016655,NM_005254,NR_026891,NM_016654	chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,+,-,-,-,-,-	GABPB1,LOC100129387,GABPB1,GABPB1,GABPB1,FLJ10038,GABPB1	7306,6010,7306,7306,7306,6777,7306
chr5:73979736-73980443	chr5	+	73979995	73980343	True	NM_003633,NM_000521	chr5,chr5	-,+	ENC1,HEXB	-42746,625
chr18:48556559-48556806	chr18	+	48556586	48556696	True	NM_005359,NM_016626	chr18,chr18	+,-	SMAD4,MEX3C	-54,167405
chr13:50743887-50745396	chr13	+	50743952	50745404	True	NR_002612,NR_002183	chr13,chr13	-,+	DLEU2,ST13P4	-44275,749
chr16:15246020-15246662	chr16	+	15246114	15246366	True	NM_015027,NR_037466	chr16,chr16	+,-	PDXDC1,MIR3180-4	-177332,2543
chr16:15246020-15246662	chr16	+	18493550	18493600	False	NR_036142,NR_003569,NR_036141,NR_036144	chr16,chr16,chr16,chr16	-,+,-,-	MIR3180-2,ABCC6P1,MIR3180-1,MIR3180-3	2574,88969,2578,2578
chr16:15246020-15246662	chr16	-	15007606	15007656	False	NR_036142,NR_023387,NR_036141,NR_036144	chr16,chr16,chr16,chr16	+,-,+,+	MIR3180-2,ABCC6P2,MIR3180-1,MIR3180-3	-2576,-89047,-2580,-2580
chr16:15246020-15246662	chr16	-	16406260	16406310	False	NR_036142,NR_036447,NR_036141,NM_001079528,NR_036144	chr16,chr16,chr16,chr16,chr16	+,+,+,-,+	MIR3180-2,PKD1P1,MIR3180-1,ABCC6,MIR3180-3	-2575,5155,-2579,-88932,-2579
chr9:139740326-139740526	chr9	+	139740339	139740517	True	NM_003792,NM_206920,NM_014172,NM_001080482,NM_001135861	chr9,chr9,chr9,chr9,chr9	-,+,+,+,+	EDF1,MAMDC4,PHPT1,C9orf172,PHPT1	20271,6301,2738,-1523,2738
chr1:28099348-28099645	chr1	+	28099350	28099492	True	NM_177424,NM_022873	chr1,chr1	+,-	STX12,IFI6	201,-100626
chr5:59175184-59175658	chr5	+	59175184	59175556	True	NR_024617,NM_001104631	chr5,chr5	+,-	PART1,PDE4D	607983,14115
chr10:46901527-46902570	chr10	+	46901544	46902345	True	NR_027632,NM_181519	chr10,chr10	+,-	FAM35B,SYT15	-3962,68313
chr10:46901527-46902570	chr10	+	88915369	88915419	False	NM_019054,NM_005271	chr10,chr10	+,-	FAM35A,GLUD1	-60467,-60593
chr10:46901527-46902570	chr10	+	47383982	47384032	False	NR_024495,NR_027634	chr10,chr10	-,+	LOC642826,FAM35B2	-140488,-4313
chr10:46901527-46902570	chr10	+	49091294	49092420	False	NM_001137548,NM_002750	chr10,chr10	-,+	FAM25C,MAPK8	115462,517266
chr17:74448393-74448594	chr17	+	74448500	74448568	True	NM_022066,NM_001166579	chr17,chr17	-,+	UBE2O,AANAT	770,864
chr11:61063808-61064282	chr11	+	61064122	61064188	True	NM_015533,NM_152718	chr11,chr11	+,-	DAK,VWCE	36465,-1334
chrY:16102581-16103595	chrY	+	16102581	16103366	True	NM_181880,NM_004679	chrY,chrY	-,-	VCY1B,VCY	-4193,-4189
chrY:16102581-16103595	chrY	-	16163123	16163908	False	NM_181880,NM_004679	chrY,chrY	+,+	VCY1B,VCY	4193,4189
chrX:24041145-24042852	chrX	+	24041337	24042871	True	NM_030624,NM_001415	chrX,chrX	-,+	KLHL15,EIF2S3	2483,30193
chr13:109896378-109898365	chr13	+	109896548	109898331	True	NM_003749,NM_001198950	chr13,chr13	-,+	IRS2,MYO16	540633,-615029
chr3:38307758-38309257	chr3	+	38307878	38309080	True	NM_004256,NR_024024	chr3,chr3	+,-	SLC22A13,ACAA1	-631,-129145
chr3:123698877-123699112	chr3	+	123699013	123699157	True	NR_028136,NM_017578	chr3,chr3	+,-	KALRN,ROPN1	114400,11092
chr9:116205832-116207568	chr9	+	116206266	116207464	True	NM_144488,NM_017443	chr9,chr9	+,-	RGS3,POLE3	62,-33237
chr7:73669502-73669992	chr7	+	73669661	73669768	True	NM_181471,NM_003388,NM_002914	chr7,chr7,chr7	-,+,-	RFC2,CLIP2,RFC2	-923,34036,-923
chr16:28507024-28507344	chr16	+	28507091	28507151	True	NM_001042432,NM_018690,NM_000086	chr16,chr16,chr16	-,+,-	CLN3,APOBR,CLN3	-3468,-1149,-3688
chr10:29701803-29702246	chr10	+	29701810	29702119	True	NR_030335,NR_003930	chr10,chr10	-,+	MIR604,LOC387647	131960,-3367
chr21:37694963-37696264	chr21	+	37694985	37696007	True	NM_012130,NM_015358	chr21,chr21	-,+	CLDN14,MORC3	142775,-2557
chr5:140214358-140214583	chr5	+	140214377	140214625	True	NM_031849,NM_002109,NM_018909,NM_031848,NM_031856,NM_018910,NM_018911,NM_031852	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,-,+,+,+,+,+,+	PCDHA6,HARS,PCDHA6,PCDHA6,PCDHA8,PCDHA7,PCDHA8,PCDHA7	-6778,-143406,-6778,-6778,6281,-459,6281,-459
chr5:140214358-140214583	chr5	+	140228609	140228737	False	NM_014005,NM_031860,NM_002109,NM_018911,NM_031859,NM_031856,NM_031857,NM_018901	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,-,+,+,+,+,+	PCDHA9,PCDHA10,HARS,PCDHA8,PCDHA10,PCDHA8,PCDHA9,PCDHA10	-1303,6896,-157638,-7753,6896,-7753,-1303,6896
chr7:38695814-38696061	chr7	+	38695829	38696049	True	NM_139316,NM_001166018	chr7,chr7	-,+	AMPH,POU6F2	-24662,321559
chr9:18482858-18483679	chr9	+	18482871	18483517	True	NM_153707,NM_001040272,NM_052866	chr9,chr9,chr9	-,+,+	FAM154A,ADAMTSL1,ADAMTSL1	549789,-8829,-8829
chrX:153409267-153409665	chrX	+	153409286	153409694	True	NM_020061,NM_001110792	chrX,chrX	+,-	OPN1LW,MECP2	30,-46098
chr12:57080865-57081377	chr12	+	57080865	57081213	True	NM_003725,NM_006601	chr12,chr12	+,-	HSD17B6,PTGES3	75894,915
chr17:41130346-41130939	chr17	+	41130435	41130581	True	NM_001142653,NM_001136042,NM_025267,NM_173079,NM_001142654	chr17,chr17,chr17,chr17,chr17	-,-,-,+,-	AARSD1,AARSD1,AARSD1,RUNDC1,AARSD1	2020,2020,1495,2000,2020
chr3:49196089-49196921	chr3	+	49196122	49196666	True	NM_173546,NR_004405,NM_022903	chr3,chr3,chr3	+,-,-	KLHDC8B,LAMB2P1,CCDC71	12351,-4288,7169
chr2:27370754-27371688	chr2	+	27370769	27371655	True	NM_178553,NM_175769	chr2,chr2	-,+	C2orf53,TCF23	-8437,289
chr3:186523260-186523585	chr3	+	186523310	186523584	True	NR_002588,NM_181573,NM_002916	chr3,chr3,chr3	+,-,-	SNORA4,RFC4,RFC4	-17960,950,756
chrY:15012898-15014373	chrY	+	15013011	15014135	True	NM_004660,NM_001122665,NR_033667	chrY,chrY,chrY	+,+,-	DDX3Y,DDX3Y,GYG2P1	2563,1883,-479622
chr16:75597524-75599102	chr16	+	75597602	75599116	True	NM_001077418,NM_001077419,NM_001077416,NM_007285	chr16,chr16,chr16,chr16	-,-,-,+	TMEM231,TMEM231,TMEM231,GABARAPL2	-7432,-7432,-7466,1132
chr4:117519772-117520341	chr4	+	117519967	117520379	True	NM_152402,NR_031737	chr4,chr4	-,+	TRAM1L1,MIR1973	486407,-299137
chr5:74062051-74062565	chr5	+	74062225	74062605	True	NM_014886,NM_032380,NM_170681,NM_170691	chr5,chr5,chr5,chr5	+,-,-,-	NSA2,GFM2,GFM2,GFM2	497,487,487,487
chr3:160939454-160939897	chr3	+	160939578	160939931	True	NM_015938,NM_033168	chr3,chr3	+,-	NMD3,B3GALNT1	-532,-116418
chr20:17550303-17550630	chr20	+	17550478	17550540	True	NM_001011546,NM_001161705,NM_006870	chr20,chr20,chr20	+,-,+	DSTN,BFSP1,DSTN	58,-10873,58
chr19:7852212-7852480	chr19	+	7852262	7852442	True	NR_026692,NR_002931	chr19,chr19	-,+	CD209,CLEC4GP1	-39798,23
chr9:140148407-140148837	chr9	+	140148665	140148853	True	NM_015456,NM_001004353,NM_001001710	chr9,chr9,chr9	+,+,-	COBRA1,C9orf173,FAM166A	905,-2986,-6443
chr1:39797095-39797488	chr1	+	39797185	39797531	True	NM_033044,NR_003929	chr1,chr1	+,-	MACF1,PPIEL	-426,227889
chr18:3358479-3359980	chr18	+	3358717	3359945	True	NM_019856,NM_174886	chr18,chr18	-,+	MYOM1,TGIF1	-138611,52126
chr10:127506916-127507644	chr10	+	127507092	127507540	True	NM_000375,NM_016567,NM_078468,NM_078469	chr10,chr10,chr10,chr10	-,+,+,+	UROS,BCCIP,BCCIP,BCCIP	4347,4563,4563,4563
chr5:68489637-68490910	chr5	+	68489857	68490442	True	NM_176816,NM_022909	chr5,chr5	-,+	CCDC125,CENPH	126025,-4533
chr1:204166744-204167259	chr1	+	204166811	204167307	True	NM_005686,NM_002256	chr1,chr1	+,-	SOX13,KISS1	-124624,-1192
chr3:53904532-53905235	chr3	+	53904683	53905157	True	NM_022899,NM_018725	chr3,chr3	-,+	ACTR8,IL17RB	11122,-24157
chr15:26108815-26109243	chr15	+	26108818	26109234	True	NM_024490,NR_001295	chr15,chr15	-,+	ATP10A,SNORD109A	-469,-585380
chr2:74645795-74646027	chr2	+	74645855	74645939	True	NM_001145054,NM_032118	chr2,chr2	-,+	C2orf81,WDR54	-1011,2945
chr1:45139737-45140023	chr1	+	45139746	45140068	True	NM_001145636,NM_024587	chr1,chr1	+,-	C1orf228,TMEM53	325,81
chr9:37649126-37650316	chr9	+	37649144	37650203	True	NM_014907,NM_001134485	chr9,chr9	+,-	FRMPD1,TOMM5	848,-56508
chr12:50713399-50714930	chr12	+	50713941	50714551	True	NM_016357,NM_001170804	chr12,chr12	-,+	LIMA1,LARP4	-36588,80040
chr5:122116423-122118024	chr5	+	122116707	122117709	True	NM_000943,NM_003100	chr5,chr5	-,+	PPIC,SNX2	254766,-6016
chr9:15554311-15554796	chr9	+	15554336	15554775	True	NM_173550,NM_033222	chr9,chr9	+,-	C9orf93,PSIP1	-1299,-43333
chr19:5792039-5792925	chr19	+	5792430	5792814	True	NM_020175,NM_001134316,NM_001161619,NM_004558	chr19,chr19,chr19,chr19	-,-,-,+	DUS3L,PRR22,DUS3L,NRTN	-1181,-7654,-1181,31003
chr18:59996705-59997453	chr18	+	59996759	59997349	True	NM_176787,NM_003839	chr18,chr18	-,+	PIGN,TNFRSF11A	-142470,-4262
chr12:24074794-24076038	chr12	+	24074862	24075863	True	NR_030625,NM_006940	chr12,chr12	+,-	MIR920,SOX5	289491,26824
chr22:35617843-35619112	chr22	+	35618032	35618715	True	NM_001003681,NM_005368	chr22,chr22	+,-	HMGXB4,MB	34729,394732
chr5:150402677-150403378	chr5	+	150402865	150403414	True	NM_002084,NM_006058	chr5,chr5	+,-	GPX3,TNIP1	-2917,57634
chr13:41493775-41495191	chr13	+	41494524	41495219	True	NR_030352,NR_003365	chr13,chr13	+,-	MIR621,SUGT1P3	-109673,717
chr7:55088285-55088750	chr7	+	55088324	55088788	True	NM_201284,NM_005228,NM_014302,NM_201282,NM_201283	chr7,chr7,chr7,chr7,chr7	+,+,-,+,+	EGFR,EGFR,SEC61G,EGFR,EGFR	-1650,-1650,-261385,-1650,-1650
chr14:65747906-65748301	chr14	+	65747914	65748001	True	NM_178155,NR_024334	chr14,chr14	+,-	FUT8,LOC645431	129838,131389
chr6:110467171-110468403	chr6	+	110467502	110468191	True	NM_001024934,NM_015891	chr6,chr6	-,+	WASF1,CDC40	33066,33432
chr11:66826396-66826730	chr11	+	66826498	66826728	True	NM_014578,NM_001040716	chr11,chr11	+,-	RHOD,PC	-2260,-100651
chr10:65284626-65285269	chr10	+	65284807	65285101	True	NM_032776,NM_001001330	chr10,chr10	-,+	JMJD1C,REEP3	-59085,-3741
chrX:64883849-64885591	chrX	+	64884330	64885543	True	NM_002444,NR_033742	chrX,chrX	+,-	MSN,FKSG43	1967,-112029
chr16:89987993-89988250	chr16	+	89988073	89988223	True	NM_002386,NM_145039,NM_001197181,NM_006086	chr16,chr16,chr16,chr16	+,-,+,+	MC1R,CENPBD1,TUBB3,TUBB3	-3837,51067,193,1463
chr1:226371814-226372590	chr1	+	226371909	226372395	True	NM_022735,NM_031944	chr1,chr1	-,+	ACBD3,MIXL1	2086,38987
chr3:176913881-176914241	chr3	+	176913929	176914219	True	NM_024665,NM_181361	chr3,chr3	-,+	TBL1XR1,KCNMB2	881,1340004
chr7:40173663-40173935	chr7	+	40173684	40173824	True	NM_024728,NM_138701,NM_001193312,NM_001193313,NM_001193311	chr7,chr7,chr7,chr7,chr7	+,-,+,+,+	C7orf10,C7orf11,C7orf10,C7orf10,C7orf10	750,477,750,750,750
chr8:38121944-38122506	chr8	+	38122030	38122456	True	NM_001164232,NM_001102560,NM_001102559,NM_032483	chr8,chr8,chr8,chr8	+,-,-,-	DDHD2,PPAPDC1B,PPAPDC1B,PPAPDC1B	-32610,4342,4342,4342
chr18:2564207-2565132	chr18	+	2564363	2564888	True	NM_006101,NM_022840	chr18,chr18	+,-	NDC80,METTL4	6621,6656
chr3:44917070-44917652	chr3	+	44917219	44917690	True	NM_003241,NM_001135179	chr3,chr3	+,-	TGM4,ZDHHC3	-1172,100034
chr17:65048278-65048555	chr17	+	65048288	65048602	True	NM_014877,NM_000727	chr17,chr17	-,+	HELZ,CACNG1	192767,-7687
chrX:154002545-154003002	chrX	+	154002656	154002902	True	NR_002984,NM_080612,NR_002969	chrX,chrX,chrX	+,-,+	SNORA56,GAB3,SNORA36A	370,-23308,-5904
chr20:31988475-31989154	chr20	+	31988673	31988958	True	NM_016408,NM_001032999,NM_016082	chr20,chr20,chr20	-,+,-	CDK5RAP1,CBFA2T2,CDK5RAP1	436,88969,436
chr1:117542796-117543605	chr1	+	117542798	117543416	True	NM_001145635,NM_004258	chr1,chr1	-,+	TRIM45,CD101	121050,965
chr10:135040580-135040882	chr10	+	135040584	135040764	True	NR_030170,NM_003577	chr10,chr10	-,+	MIR202,UTF1	20410,3013
chr16:4816544-4816763	chr16	+	4816621	4816702	True	NM_021646,NR_029453	chr16,chr16	-,+	ZNF500,LOC440335	515,21695
chr17:17493269-17493921	chr17	+	17493435	17493941	True	NM_007169,NM_030665,NM_148172	chr17,chr17,chr17	-,+,-	PEMT,RAI1,PEMT	-7690,90845,1103
chr16:21514842-21515327	chr16	+	21515044	21515221	True	NM_001077180,NR_027155	chr16,chr16	+,-	METTL9,LOC100271836	95634,-1442
chr9:118257439-118259344	chr9	+	118257503	118259326	True	NM_017418,NM_002160	chr9,chr9	+,-	DEC1,TNC	-353464,-377017
chr1:53068832-53070436	chr1	+	53068945	53070153	True	NM_015696,NM_015269	chr1,chr1	+,-	GPX7,ZCCHC11	-953,-50183
chr10:135267145-135267633	chr10	+	135267187	135267629	True	NR_002934,NM_001012508	chr10,chr10	+,-	LOC619207,SPRN	0,-29066
chr11:72384889-72385187	chr11	+	72384946	72385216	True	NM_033388,NM_001146209,NM_002599	chr11,chr11,chr11	+,-,-	ATG16L2,PDE2A,PDE2A	140234,-4838,328
chr17:38720918-38721701	chr17	+	38721008	38721538	True	NM_001552,NM_001838	chr17,chr17	+,-	IGFBP4,CCR7	-121383,248
chr7:15564207-15565321	chr7	+	15564679	15565306	True	NM_001195280,NM_001004320	chr7,chr7	+,-	LOC100506049,AGMO	1001198,36384
chr9:79632039-79633339	chr9	+	79632047	79633199	True	NM_015225,NM_001013735	chr9,chr9	-,+	PRUNE2,FOXB2	-111044,1371
chr2:172868763-172869390	chr2	+	172869006	172869212	True	NM_199227,NM_004405	chr2,chr2	+,-	METAP1D,DLX2	-4255,98316
chr3:57582685-57583030	chr3	+	57582792	57583072	True	NM_001660,NM_177966	chr3,chr3	-,+	ARF4,PDE12	193,-40862
chr2:178971609-178972494	chr2	+	178971873	178972389	True	NM_001077197,NM_152945	chr2,chr2	-,+	PDE11A,RBM45	733,4792
chr17:37761211-37761431	chr17	+	37761215	37761301	True	NM_032192,NM_006160	chr17,chr17	+,-	PPP1R1B,NEUROD2	21877,2924
chr7:77428122-77428409	chr7	+	77428205	77428399	True	NM_032936,NM_001127360,NM_001127358	chr7,chr7,chr7	-,+,+	TMEM60,PHTF2,PHTF2	-458,-147,-147
chr7:77491027-77492058	chr7	+	77491414	77492117	True	NM_032936,NM_020432	chr7,chr7	-,+	TMEM60,PHTF2	-63667,-22026
chr16:85718278-85718997	chr16	+	85718277	85718889	True	NM_014615,NM_016095	chr16,chr16	+,-	KIAA0182,GINS2	-71408,3749
chr16:88213128-88214234	chr16	+	88213244	88214103	True	NM_001173543,NM_001739	chr16,chr16	+,-	BANP,CA5A	-209672,-243132
chr16:88213128-88214234	chr16	+	29225031	29225891	False	NR_002939,NM_001031827	chr16,chr16	+,-	RUNDC2C,BOLA2	76649,240452
chr8:7334041-7334902	chr8	+	7334172	7334804	True	NM_080389,NM_001040702,NM_152251,NM_001040704,NM_001040703	chr8,chr8,chr8,chr8,chr8	-,-,-,-,+	DEFB104A,DEFB104B,DEFB106A,DEFB106B,DEFB105B	-1568,-1568,9163,9163,10438
chr8:7334041-7334902	chr8	-	7691986	7692197	False	NM_080389,NM_001040702,NM_152251,NM_001040704,NM_152250	chr8,chr8,chr8,chr8,chr8	+,+,+,+,-	DEFB104A,DEFB104B,DEFB106A,DEFB106B,DEFB105A	1795,1795,-9352,-9352,-10626
chr1:55447145-55447407	chr1	+	55447304	55447456	True	NM_014762,NM_182532	chr1,chr1	-,+	DHCR24,TMEM61	-94383,-890
chr12:49181552-49182307	chr12	+	49181614	49182144	True	NM_000725,NM_020983,NM_015270	chr12,chr12,chr12	+,-,-	CACNB3,ADCY6,ADCY6	30367,726,-3737
chr11:6518035-6518483	chr11	+	6518230	6518344	True	NM_173589,NM_144666,NM_012402	chr11,chr11,chr11	+,+,-	DNHD1,DNHD1,ARFIP2	181,181,-15635
chr5:150637397-150637782	chr5	+	150637419	150637794	True	NM_000405,NM_015621,NM_001167607	chr5,chr5,chr5	+,-,+	GM2A,CCDC69,GM2A	-4857,-33765,-4857
chr5:148036380-148037189	chr5	+	148036552	148037228	True	NM_000024,NM_000870	chr5,chr5	+,-	ADRB2,HTR4	168927,-2813
chr4:85866862-85868253	chr4	+	85867187	85867916	True	NM_014991,NR_015359	chr4,chr4	-,+	WDFY3,NCRNA00247	19679,20054
chr11:2715218-2715937	chr11	+	2715263	2715981	True	NR_024627,NR_002728	chr11,chr11	+,-	KCNQ1DN,KCNQ1OT1	175281,5297
chr12:124777061-124777628	chr12	+	124777163	124777415	True	NM_001077261,NM_181709	chr12,chr12	-,+	NCOR2,FAM101A	274645,-3504
chr16:14405634-14406117	chr16	+	14405748	14405844	True	NR_029854,NM_001134477,NR_030177	chr16,chr16,chr16	+,-,+	MIR365-1,PARN,MIR193B	-2665,318326,-7983
chr2:34079665-34080317	chr2	+	34079845	34080229	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-340961,-126561
chr12:21801292-21802880	chr12	+	21801418	21802671	True	NM_030572,NM_002300,NM_001174097	chr12,chr12,chr12	+,-,-	C12orf39,LDHB,LDHB	-122216,8169,8108
chr4:68577520-68578486	chr4	+	68577524	68578435	True	NR_015439,NM_018227	chr4,chr4	+,-	LOC550112,UBA6	-10579,-10635
chr11:93517683-93517889	chr11	+	93517688	93517934	True	NM_024116,NM_004268	chr11,chr11	-,+	TAF1D,MED17	-42985,-334
chr1:183264362-183265074	chr1	+	183264417	183264953	True	NM_170706,NM_005562	chr1,chr1	-,+	NMNAT2,LAMC2	9114,-109302
chr2:33703555-33704379	chr2	+	33703588	33704395	True	NM_015475,NM_001139488	chr2,chr2	-,+	FAM98A,RASGRP3	120022,-2325
chr4:25866077-25866607	chr4	+	25866145	25866653	True	NM_001145432,NM_015187	chr4,chr4	+,-	C4orf52,SEL1L3	49160,-1535
chr4:119758224-119758697	chr4	+	119758224	119758735	True	NM_001128933,NM_014822	chr4,chr4	+,-	SYNPO2,SEC24D	51260,-898
chr9:96108045-96108525	chr9	+	96108158	96108449	True	NM_001098808,NM_014612	chr9,chr9	-,+	C9orf129,FAM120A	298,105723
chr17:39578968-39580515	chr17	+	39579261	39580143	True	NM_030975,NM_003770	chr17,chr17	+,-	KRTAP9-9,KRT37	-167676,729
chr12:56109196-56109841	chr12	+	56109242	56109740	True	NM_002905,NM_002206,NM_001144996,NM_001144997,NM_001487,NR_037655,NR_037657,NR_037656,NR_037658,NM_001199771	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,-,-,-,+,+,+,+,+,+	RDH5,ITGA7,ITGA7,ITGA7,BLOC1S1,BLOC1S1,BLOC1S1,BLOC1S1,BLOC1S1-RDH5,RDH5	4410,-7556,-7556,-3153,77,77,335,335,77,4410
chr1:117304380-117305630	chr1	+	117304415	117305533	True	NM_001767,NM_001542	chr1,chr1	+,-	CD2,IGSF3	-7380,-94101
chr11:78289279-78291114	chr11	+	78290124	78291020	True	NR_027479,NM_024678,NM_020798	chr11,chr11,chr11	-,-,+	NARS2,NARS2,USP35	-4215,-4215,-390324
chr2:223731022-223731498	chr2	+	223731132	223731368	True	NM_005687,NM_203372,NM_004457	chr2,chr2,chr2	-,+,+	FARSB,ACSL3,ACSL3	-210305,-5461,-5461
chr21:46239475-46239942	chr21	+	46239556	46239928	True	NM_058190,NM_006936	chr21,chr21	+,-	C21orf70,SUMO3	120026,-1512
chr1:1295747-1296739	chr1	+	1295951	1296699	True	NM_152228,NM_032348	chr1,chr1	+,-	TAS1R3,MXRA8	-29276,-2036
chr12:7848738-7849670	chr12	+	7849316	7849509	True	NM_199286,NM_020634	chr12,chr12	+,-	DPPA3,GDF3	14579,-956
chr20:49252618-49253205	chr20	+	49252645	49253221	True	NR_030375,NM_080829	chr20,chr20	+,-	MIR645,FAM65C	-50373,255
chr17:72731673-72732064	chr17	+	72731688	72731962	True	NM_001163989,NM_001163990,NM_001006638,NM_139018	chr17,chr17,chr17,chr17	+,+,+,-	RAB37,RAB37,RAB37,CD300LF	996,1393,1393,-22580
chr19:11529572-11529898	chr19	+	11529675	11529875	True	NM_001001329,NM_001161616,NM_001035223	chr19,chr19,chr19	+,-,-	PRKCSH,RGL3,RGL3	16393,193,193
chr22:25961727-25962653	chr22	+	25961727	25962702	True	NM_001135772,NM_005160	chr22,chr22	-,+	LRP5L,ADRBK2	-184183,-917
chr22:25961727-25962653	chr22	+	25680029	25680093	False	NR_029395,NM_182492	chr22,chr22	+,-	IGLL3P,LRP5L	34130,78495
chr1:54419703-54421392	chr1	+	54419703	54420441	True	NM_052940,NM_016126	chr1,chr1	+,-	LRRC42,HSPB11	-7717,-8415
chr3:9886490-9886910	chr3	+	9886616	9886828	True	NR_037162,NM_173659,NM_001142547	chr3,chr3,chr3	+,-,-	TTLL3,RPUSD3,RPUSD3	-35033,-914,-914
chr1:226412626-226413276	chr1	+	226412713	226413301	True	NM_022735,NM_031944	chr1,chr1	-,+	ACBD3,MIXL1	-38290,-1381
chr22:39927722-39928302	chr22	+	39927791	39928331	True	NM_182810,NM_194326	chr22,chr22	+,-	ATF4,RPS19BP1	-11273,579
chr18:57678418-57678749	chr18	+	57678501	57678750	True	NM_133459,NM_021127	chr18,chr18	-,+	CCBE1,PMAIP1	-313857,-111360
chr7:137025771-137026890	chr7	+	137025817	137026598	True	NM_002825,NR_030165	chr7,chr7	-,+	PTN,MIR490	2002,-437970
chr22:37418475-37419229	chr22	+	37418475	37419259	True	NM_001013436,NR_024038,NM_021126,NM_003312,NM_001130517	chr22,chr22,chr22,chr22,chr22	+,+,+,-,+	MPST,MPST,MPST,TST,MPST	-2824,-2824,-2824,-2984,-2824
chr3:169490531-169490776	chr3	+	169490531	169490655	True	NM_001185119,NM_001185118,NM_032487,NM_018657,NR_033702,NR_001566,NR_033703	chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,-,+,+,-,+	MYNN,MYNN,ARPM1,MYNN,MYNN,TERC,MYNN	1397,197,-2848,197,197,-7683,197
chr16:67228518-67229763	chr16	+	67228571	67229667	True	NM_178516,NM_001950,NM_024712,NR_029887	chr16,chr16,chr16,chr16	-,+,+,-	EXOC3L1,E2F4,ELMO3,MIR328	-4464,-2554,3360,6681
chr10:94834822-94835177	chr10	+	94834903	94835211	True	NM_013451,NM_057157,NM_000783	chr10,chr10,chr10	-,+,+	MYOF,CYP26A1,CYP26A1	406913,-1722,-1307
chr1:151430325-151430765	chr1	+	151430455	151430667	True	NM_001194937,NM_020770,NM_015100,NM_001194938,NM_145796	chr1,chr1,chr1,chr1,chr1	-,+,-,-,-	POGZ,CGN,POGZ,POGZ,POGZ	1324,53194,1324,1324,1324
chr1:154471032-154471516	chr1	+	154471216	154471573	True	NM_001010846,NM_182499,NM_001098475	chr1,chr1,chr1	-,+,+	SHE,TDRD10,TDRD10	3012,3121,3121
chr14:103567231-103568154	chr14	+	103567679	103568163	True	NM_001077594,NM_006035	chr14,chr14	+,-	EXOC3L4,CDC42BPB	-1249,-43937
chr20:33814985-33816840	chr20	+	33815078	33816872	True	NM_006690,NM_181468	chr20,chr20	+,-	MMP24,EIF6	-590,55684
chr20:43729872-43730573	chr20	+	43729984	43730575	True	NM_002251,NM_002638	chr20,chr20	-,+	KCNS1,PI3	-231,72964
chr9:88551585-88552581	chr9	+	88551885	88552442	True	NM_024635,NM_016548	chr9,chr9	+,-	NAA35,GOLM1	3614,162119
chr22:32604489-32605327	chr22	+	32604709	32605361	True	NM_001098527,NM_006604,NM_001159546,NM_001159545	chr22,chr22,chr22,chr22	-,+,-,-	RFPL2,RFPL3,RFPL2,RFPL2	-5245,145510,-6172,-3991
chr19:16285863-16286275	chr19	+	16285872	16286134	True	NM_014077,NM_054113	chr19,chr19	+,-	FAM32A,CIB3	10100,-1586
chr22:37306907-37307537	chr22	+	37307136	37307520	True	NM_000395,NM_002854	chr22,chr22	+,-	CSF2RB,PVALB	2154,-91619
chr12:95043148-95043365	chr12	+	95043194	95043386	True	NM_020698,NR_030171	chr12,chr12	-,+	TMCC3,MIR492	988,184787
chr18:51794238-51795589	chr18	+	51794270	51795323	True	NM_007195,NM_015832	chr18,chr18	+,-	POLI,MBD2	525,-43112
chr15:66790210-66790421	chr15	+	66790347	66790445	True	NM_006049,NM_000968,NR_003105,NR_002440,NR_002441,NR_002442,NR_002443,NM_017975	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,+,-,-,-,-,+	SNAPC5,RPL4,ZWILCH,SNORD16,SNORD18A,SNORD18B,SNORD18C,ZWILCH	-201,6789,6985,4853,5257,4034,3261,6985
chr9:137775567-137775942	chr9	+	137775766	137775828	True	NR_037460,NM_015837,NM_004108	chr9,chr9,chr9	-,+,+	MIR3689A,FCN2,FCN2	-33276,-3159,-3159
chr22:50962262-50962480	chr22	+	50962268	50962476	True	NM_005138,NM_001953,NM_001169111,NM_001169110,NM_001014440,NM_152299,NM_001169109,NM_001113755,NM_001113756	chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,-,+,-,-,-	SCO2,TYMP,SCO2,SCO2,ODF3B,NCAPH2,SCO2,TYMP,TYMP	1608,6088,1607,2148,8582,-15674,2442,6088,5832
chr7:73132670-73133000	chr7	+	73132712	73133019	True	NM_004603,NR_036247,NM_001165903	chr7,chr7,chr7	-,+,-	STX1A,MIR4284,STX1A	1048,-7116,1048
chr12:82809630-82810580	chr12	+	82809659	82810627	True	NM_032230,NR_033192	chr12,chr12	+,-	C12orf26,CCDC59	-57434,-57075
chr12:133337564-133337827	chr12	+	133337612	133337838	True	NM_001170544,NM_015114	chr12,chr12	+,-	PGAM5,ANKLE2	-50273,663
chr10:27381639-27381934	chr10	+	27381638	27381742	True	NM_014915,NM_001172303	chr10,chr10	-,+	ANKRD26,MASTL	7739,62010
chr19:2389980-2390331	chr19	+	2389986	2390150	True	NM_182973,NM_012458	chr19,chr19	+,-	TMPRSS9,TIMM13	-253,37775
chr5:176447590-176448201	chr5	+	176447718	176448018	True	NM_012279,NM_001199298	chr5,chr5	+,-	ZNF346,UIMC1	1678,-13923
chr12:5018786-5019002	chr12	+	5018845	5019051	True	NM_006422,NM_000217	chr12,chr12	-,+	AKAP3,KCNA1	-264502,21
chr4:186699764-186700070	chr4	+	186699791	186700111	True	NM_001145673,NM_003265	chr4,chr4	-,+	SORBS2,TLR3	-2725,290197
chr3:111731284-111732774	chr3	+	111731557	111732623	True	NM_001190259,NM_001008273	chr3,chr3	-,+	GCET2,TAGLN3	119579,-13609
chr3:120461097-120461585	chr3	+	120461313	120461513	True	NM_173825,NM_005513	chr3,chr3	-,+	RABL3,GTF2E1	13,44
chr22:21870041-21870695	chr22	+	21870049	21870709	True	NR_003700,NM_003347	chr22,chr22	-,+	PI4KAP2,UBE2L3	1121,51247
chr22:21870041-21870695	chr22	+	20426072	20426732	False	NR_003563,NR_026919	chr22,chr22	-,+	PI4KAP1,LOC150197	-27377,-232268
chr22:21870041-21870695	chr22	-	21772759	21773419	False	NM_015094,NR_003700	chr22,chr22	+,-	HIC2,PI4KAP2	-1117,98411
chr11:10714474-10715173	chr11	+	10714608	10715190	True	NM_001100167,NM_130385,NM_014633,NM_001100163	chr11,chr11,chr11,chr11	-,-,+,-	MRVI1,MRVI1,CTR9,MRVI1	-35,395,57620,395
chr1:144931498-144931814	chr1	+	144931497	144931673	True	NM_004892,NM_001002811	chr1,chr1	+,-	SEC22B,PDE4DIP	164733,409
chr22:18123949-18124656	chr22	+	18123975	18124300	True	NM_001696,NM_015367	chr22,chr22	-,+	ATP6V1E1,BCL2L13	-12387,-2552
chr17:79893237-79893662	chr17	+	79893242	79893630	True	NM_002359,NR_015454,NM_153824,NM_006907	chr17,chr17,chr17,chr17	-,+,-,-	MAFG,LOC92659,PYCR1,PYCR1	-7654,-7588,1388,1388
chr19:9786545-9787235	chr19	+	9786693	9786795	True	NM_001048241,NM_017656,NM_001130032,NM_001130031	chr19,chr19,chr19,chr19	+,-,-,-	UBL5,ZNF562,ZNF562,ZNF562	151772,-917,-917,-917
chr14:65289341-65289680	chr14	+	65289345	65289725	True	NM_001204063,NM_000347,NM_001024858	chr14,chr14,chr14	+,-,-	CHURC1,SPTB,SPTB	91353,191,191
chr9:130617425-130618817	chr9	+	130617590	130618619	True	NM_000118,NM_001114753,NM_001018078	chr9,chr9,chr9	-,-,+	ENG,ENG,FPGS	-543,-543,-52133
chr17:30470348-30471421	chr17	+	30470356	30471188	True	NM_001033566,NR_002222,NM_018307,NM_001033568	chr17,chr17,chr17,chr17	+,-,+,+	RHOT1,ARGFXP2,RHOT1,RHOT1	-944,7460,-944,-944
chr17:47839756-47840091	chr17	+	47839776	47840125	True	NM_030802,NM_001199155	chr17,chr17	-,+	FAM117A,MYST2	1444,25855
chr9:139922099-139922313	chr9	+	139922269	139922339	True	NM_004479,NM_001606,NM_212533,NM_207511	chr9,chr9,chr9,chr9	-,-,-,+	FUT7,ABCA2,ABCA2,C9orf139	5003,451,1085,-404
chr17:42247108-42248237	chr17	+	42247358	42248034	True	NM_178542,NM_080863	chr17,chr17	-,+	C17orf65,ASB16	16098,39
chr19:11670214-11670717	chr19	+	11670217	11670509	True	NM_032377,NM_001299	chr19,chr19	-,+	ELOF1,CNN1	-166,-20689
chr12:6879495-6879905	chr12	+	6879541	6879935	True	NM_002286,NR_026581,NM_002824	chr12,chr12,chr12	+,-,+	LAG3,MLF2,PTMS	1734,-16905,-4051
chr12:100596489-100597001	chr12	+	100596648	100597014	True	NM_022496,NR_024261	chr12,chr12	+,-	ACTR6,GOLGA2B	-2125,-29527
chr9:139699593-139699987	chr9	+	139699800	139700000	True	NM_024718,NM_001173989,NM_001173988,NR_024580,NM_001039374	chr9,chr9,chr9,chr9,chr9	+,+,+,-,+	C9orf86,C9orf86,C9orf86,LOC100131193,KIAA1984	2373,2373,2373,3350,-9061
chr14:103056753-103057011	chr14	+	103056753	103057002	True	NM_152326,NM_015156	chr14,chr14	-,+	ANKRD9,RCOR1	-80625,2230
chr17:32694119-32694511	chr17	+	32694325	32694481	True	NM_005408,NM_002981	chr17,chr17	+,-	CCL13,CCL1	-10913,-4073
chr22:44578783-44579215	chr22	+	44578792	44579244	True	NR_024426,NM_001099294,NM_001137606,NM_022141,NR_024428	chr22,chr22,chr22,chr22,chr22	+,-,+,+,+	PARVG,KIAA1644,PARVG,PARVG,PARVG	-2073,129537,-1586,-2073,-1627
chr5:851890-852790	chr5	+	852300	852564	True	NM_001166260,NM_024786	chr5,chr5	+,-	TRIP13,ZDHHC11	40404,-1199
chr10:21789469-21789699	chr10	+	21789495	21789649	True	NM_001010911,NM_001195627,NR_031736	chr10,chr10,chr10	-,+,-	C10orf114,MLLT10,MIR1915	-3282,33451,-3925
chr3:197352161-197353864	chr3	+	197352589	197353534	True	NR_003266,NM_001011537	chr3,chr3	-,+	LOC220729,FYTTD1	1269,122889
chr3:197352161-197353864	chr3	-	195386153	195386923	False	NM_001647,NR_003265	chr3,chr3	-,+	APOD,SDHAP2	-75077,-1295
chr3:197352161-197353864	chr3	+	195714999	195715945	False	NR_034088,NR_003264	chr3,chr3	+,-	LOC401109,SDHAP1	153561,1256
chr11:2922564-2922967	chr11	+	2922819	2922895	True	NM_183233,NM_007105,NM_002555	chr11,chr11,chr11	+,-,+	SLC22A18,SLC22A18AS,SLC22A18	-1919,2330,616
chr7:6865228-6865587	chr7	+	6865313	6865569	True	NM_198097,NM_173565	chr7,chr7	-,+	C7orf28B,RSPH10B	407,-71624
chr7:6865228-6865587	chr7	-	5938689	5938945	False	NM_001099697,NM_015622	chr7,chr7	-,+	RSPH10B2,CCZ1	71419,-399
chr12:122462208-122462879	chr12	+	122462239	122462772	True	NM_001171993,NM_020993,NM_001024808	chr12,chr12,chr12	-,+,+	HPD,BCL7A,BCL7A	-135722,-2429,-2429
chr18:9881262-9881932	chr18	+	9881730	9881825	True	NM_005134,NM_001098529,NM_032243	chr18,chr18,chr18	-,+,+	PPP4R1,TXNDC2,TXNDC2	-267130,3897,3897
chr11:59807975-59809246	chr11	+	59808013	59808933	True	NM_152851,NM_173801	chr11,chr11	-,+	MS4A6A,PLAC1L	141791,-323
chr17:27230131-27230849	chr17	+	27230286	27230622	True	NM_144683,NM_005702,NM_004475	chr17,chr17,chr17	-,+,-	DHRS13,ERAL1,FLOT2	-197,-48294,-5571
chr17:44439486-44439887	chr17_ctg5_hap1	-	391001	391256	False	NM_001039083,NM_001113738,NM_001103154,NM_016632,NM_006178	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	+,+,+,+,-	ARL17B,ARL17A,ARL17B,ARL17A,NSF	355,326,355,326,-10386
chr17:44439486-44439887	chr17_ctg5_hap1	+	1514210	1514465	False	NM_016632,NR_033799	chr17_ctg5_hap1,chr17_ctg5_hap1	-,+	ARL17A,NSFP1	-326,10447
chr17:44439486-44439887	chr17	+	44439489	44439828	True	NM_001039083,NM_001113738,NM_001103154,NM_016632,NR_033799	chr17,chr17,chr17,chr17,chr17	-,-,-,-,+	ARL17B,ARL17A,ARL17B,ARL17A,NSFP1	-355,-326,-355,-326,10350
chr17:44439486-44439887	chr17	+	44657414	44657669	False	NM_001113738,NM_016632,NM_006178	chr17,chr17,chr17	-,-,+	ARL17A,ARL17A,NSF	-326,-326,10368
chr13:46659144-46660219	chr13	+	46659476	46660068	True	NM_001872,NM_152719	chr13,chr13	-,+	CPB2,SPERT	19193,-383082
chr19:42349836-42350725	chr19	+	42350172	42350511	True	NM_173506,NM_001040283	chr19,chr19	-,+	LYPD4,DMRTC2	-1664,-1137
chr17:18266246-18266614	chr17	+	18266314	18266420	True	NM_004169,NM_148918,NM_001145127	chr17,chr17,chr17	-,-,+	SHMT1,SHMT1,EVPLL	486,486,14658
chr5:82369387-82370748	chr5	+	82369434	82370493	True	NM_003401,NM_174909,NM_022406,NR_003139,NM_022550	chr5,chr5,chr5,chr5,chr5	+,-,+,-,+	XRCC4,TMEM167A,XRCC4,SCARNA18,XRCC4	2823,2829,2823,-9278,2823
chr3:12706257-12706493	chr3	+	12706378	12706456	True	NM_002880,NM_014160	chr3,chr3	-,+	RAF1,MKRN2	-678,-107842
chr3:45267055-45267326	chr3	+	45267137	45267309	True	NM_015444,NM_015340	chr3,chr3	-,+	TMEM158,LARS2	555,162765
chr16:53087356-53087655	chr16	+	53087367	53087559	True	NR_033920,NM_025134	chr16,chr16	-,+	LOC643714,CHD9	-446480,1385
chr9:37650316-37650635	chr9	+	37650315	37650638	True	NM_014907,NM_001134485	chr9,chr9	+,-	FRMPD1,TOMM5	413,-57679
chr2:236405212-236405496	chr2	+	236405216	236405548	True	NM_014914,NM_001037131,NM_001485	chr2,chr2,chr2	+,+,-	AGAP1,AGAP1,GBX2	-2531,-2531,671160
chr18:14338285-14338606	chr13	-	19316427	19316549	True	NR_027995,NR_026852	chr13,chr13	-,+	LOC284232,LOC348021	129682,265849
chr19:10514351-10514913	chr19	+	10514630	10514850	True	NM_007065,NM_001111307,NR_031592	chr19,chr19,chr19	-,+,-	CDC37,PDE4A,MIR1181	-359,16482,-416
chr1:20249770-20250240	chr1	+	20250122	20250238	True	NM_015207,NM_014589	chr1,chr1	+,-	OTUD3,PLA2G2E	-41285,-12
chr21:34087502-34089092	chr21	+	34087870	34089121	True	NR_024622,NM_001160302	chr21,chr21	+,-	C21orf49,SYNJ1	55289,11179
chrX:153655466-153656285	chrX	+	153655606	153656334	True	NM_001009934,NM_001493,NM_001183	chrX,chrX,chrX	-,+,+	DNASE1L1,GDI1,ATP6AP1	-15179,8924,643
chr2:24342858-24343471	chr2	+	24343175	24343387	True	NM_001145710,NM_199346	chr2,chr2	+,-	LOC375190,PFN4	2962,2822
chr1:161518231-161519562	chr1	+	161518266	161519602	True	NM_000569,NM_001127593,NM_001127592,NM_001127595,NM_001127596,NM_002155	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,+	FCGR3A,FCGR3A,FCGR3A,FCGR3A,FCGR3A,HSPA6	266,861,266,861,861,-24281
chr1:161518231-161519562	chr1	+	161600340	161600390	False	NR_024151,NM_000570	chr1,chr1	+,-	HSPA7,FCGR3B	-24542,818
chr19:10489828-10490868	chr19	+	10490255	10490873	True	NM_001111307,NM_003331	chr19,chr19	+,-	PDE4A,TYK2	40459,433
chr7:20717274-20718523	chr7	+	20717395	20718539	True	NM_178559,NM_182700	chr7,chr7	+,-	ABCB5,SP8	-30486,108019
chr1:173888954-173890264	chr1	+	173889583	173890256	True	NM_001122770,NM_000488	chr1,chr1	+,-	ZBTB37,SERPINC1	-52145,-3067
chr5:150402304-150402677	chr5	+	150402309	150402675	True	NM_002084,NM_006058	chr5,chr5	+,-	GPX3,TNIP1	-2361,58372
chr19:42580807-42581414	chr19	+	42581011	42581431	True	NM_022752,NM_002088	chr19,chr19	+,-	ZNF574,GRIK5	-773,-11054
chr10:75632747-75632969	chr10	+	75632760	75632964	True	NM_001222,NM_172171,NM_172170,NM_172173,NM_001204492,NM_001145031,NM_172169	chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,-,+,-	CAMK2G,CAMK2G,CAMK2G,CAMK2G,CAMK2G,PLAU,CAMK2G	1435,1435,1435,1435,1435,37897,1435
chr14:77871660-77871861	chr14	+	77871792	77871910	True	NM_001010860,NM_138791	chr14,chr14	+,-	SAMD15,C14orf148	-28090,17372
chr3:107627993-107629297	chr3	+	107627999	107629225	True	NR_015394,NR_024276	chr3,chr3	+,-	LOC285205,LOC151658	-26005,-31084
chr12:129310178-129310717	chr12	+	129310285	129310613	True	NM_145648,NM_144669	chr12,chr12	-,+	SLC15A4,GLT1D1	-1744,27467
chr6:46998792-47000773	chr6	+	46998835	47000793	True	NM_025048,NM_153840,NM_005588	chr6,chr6,chr6	-,-,+	GPR110,GPR110,MEP1A	9339,9339,-237800
chr10:135381852-135382300	chr10	+	135381893	135382047	True	NM_001143764,NR_033789,NM_001143763,NM_130784,NM_000773	chr10,chr10,chr10,chr10,chr10	-,-,-,-,+	SYCE1,SPRNP1,SYCE1,SYCE1,CYP2E1	-2755,1465,-2755,879,-41077
chr12:57351189-57352059	chr12	+	57351439	57352027	True	NM_003708,NM_007264	chr12,chr12	-,+	RDH16,GPR182	-21,36327
chr17:45041794-45042239	chr17	+	45041805	45042177	True	NM_203400,NM_054022	chr17,chr17	-,+	RPRML,GOSR2	14495,-41370
chr7:76109764-76110091	chr7	+	76109785	76110135	True	NR_003262,NM_001102596	chr7,chr7	-,+	FDPSL2A,DTX2	-5468,-9
chr7:76109764-76110091	chr7	+	76607892	76608224	False	NR_023383,NM_006682	chr7,chr7	+,-	PMS2P11,FGL2	1914,220976
chr5:162885280-162886906	chr5	+	162885744	162886702	True	NM_012484,NM_012485,NM_145266,NM_001142556,NM_001142557	chr5,chr5,chr5,chr5,chr5	+,+,-,+,+	HMMR,HMMR,NUDCD2,HMMR,HMMR	814,814,491,814,814
chr7:4997134-4998413	chr7	+	4997309	4998213	True	NM_198403,NR_015449,NM_001100600	chr7,chr7,chr7	-,+,-	MMD2,RNF216L,MMD2	681,15402,681
chr10:60028448-60028815	chr10	+	60028452	60028846	True	NM_152230,NM_018464	chr10,chr10	-,+	IPMK,CISD1	-758,48
chrX:72784016-72784363	chrX	+	72784019	72784390	True	NR_029423,NM_001039840	chrX,chrX	-,+	LOC139201,CHIC1	-1098,-1086
chr7:39990192-39990430	chr7	+	39990211	39990391	True	NM_031267,NM_138701,NM_003718	chr7,chr7,chr7	+,-,+	CDK13,C7orf11,CDK13	-303,183910,-303
chr2:220040311-220040950	chr2	+	220040310	220040950	True	NM_024293,NM_015680,NM_001144890,NM_144712,NM_001144889	chr2,chr2,chr2,chr2,chr2	+,-,-,-,-	FAM134A,CNPPD1,SLC23A3,SLC23A3,SLC23A3	1988,802,-5493,-5493,-5493
chr1:63245944-63246647	chr1	+	63245963	63246540	True	NM_033407,NM_178221,NM_032852	chr1,chr1,chr1	-,+,+	DOCK7,ATG4C,ATG4C	-91994,3236,3236
chr3:150471303-150473065	chr3	+	150471601	150472909	True	NM_005067,NM_016275	chr3,chr3	-,+	SIAH2,SELT	8404,-150593
chr17:39995099-39996731	chr17	+	39995556	39996501	True	NM_052935,NR_033464,NR_033465,NM_152467	chr17,chr17,chr17,chr17	-,-,-,+	NT5C3L,NT5C3L,NT5C3L,KLHL10	-3033,-3068,-3033,-1571
chr1:203151132-203152699	chr1	+	203151218	203152524	True	NM_001276,NM_004997,NM_001048230	chr1,chr1,chr1	-,-,+	CHI3L1,MYBPH,ADORA1	3448,-6276,-54440
chr17:15526218-15528029	chr17	+	15526425	15527710	True	NM_006382,NM_001130842	chr17,chr17	-,+	CDRT1,ZNF286A	-3407,75180
chr17:15526218-15528029	chr17	-	18643903	18643962	False	NM_001145045,NM_031456	chr17,chr17	-,+	ZNF286B,FBXW10	-58331,3363
chr22:40742887-40743144	chr22	+	40742899	40743185	True	NM_001123378,NM_000026,NM_020831	chr22,chr22,chr22	+,+,-	ADSL,ADSL,MKL1	-446,-446,289555
chr1:28162601-28163016	chr1	+	28162647	28162881	True	NM_014110,NR_002997,NM_002713,NM_138558,NM_002946	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	PPP1R8,SCARNA1,PPP1R8,PPP1R8,RPA2	-5456,-1796,-5383,-5383,78413
chr3:53880870-53881464	chr3	+	53880919	53881451	True	NM_018397,NM_018725	chr3,chr3	-,+	CHDH,IL17RB	-499,-393
chr19:12990959-12991769	chr19	+	12991631	12991735	True	NM_006563,NM_001375,NM_000159	chr19,chr19,chr19	-,-,+	KLF1,DNASE2,GCDH	6332,650,10238
chr17:72683047-72683944	chr17	+	72683082	72683984	True	NM_175738,NM_139018	chr17,chr17	+,-	RAB37,CD300LF	-15877,25174
chr17:7993627-7995266	chr17	+	7993980	7994839	True	NR_036201,NM_001139	chr17,chr17	+,-	MIR4314,ALOX12B	-2672,-2959
chr19:13077801-13079122	chr19	+	13078371	13079040	True	NM_152654,NM_052850	chr19,chr19	+,-	DAND5,GADD45GIP1	1391,-10321
chr10:35534568-35534952	chr10	+	35534614	35534883	True	NM_001198777,NM_181698	chr10,chr10	-,+	CUL2,CCNY	-155044,1069
chr6:88192639-88193417	chr6	+	88192689	88193148	True	NM_006416,NM_020320	chr6,chr6	+,-	SLC35A1,RARS2	-10097,106638
chr2:98331598-98331961	chr2	+	98331648	98331906	True	NM_001079,NM_005735	chr2,chr2	+,-	ZAP70,ACTR1B	-1668,-51087
chr9:140136733-140137134	chr9	+	140136769	140137179	True	NM_001004353,NM_006088,NM_001001710	chr9,chr9,chr9	+,+,-	C9orf173,TUBB2C,FAM166A	8550,-1109,5093
chr1:160337095-160337446	chr1	+	160337190	160337462	True	NM_004371,NM_005598	chr1,chr1	-,+	COPA,NHLH1	-23836,-380
chr7:140813506-140814461	chr7	+	140813550	140814368	True	NM_053035,NM_001195278	chr7,chr7	-,+	MRPS33,LOC100131199	-98769,-39569
chr7:150946334-150946808	chr7	+	150946376	150946655	True	NR_030407,NM_001003801	chr7,chr7	+,-	MIR671,SMARCD3	-10920,-627
chr17:80171206-80171411	chr17	+	80171320	80171408	True	NM_001042422,NM_198082	chr17,chr17	+,-	SLC16A3,CCDC57	14884,-631
chr11:4630067-4630402	chr11	+	4630129	4630401	True	NM_018073,NM_001005169	chr11,chr11	-,+	TRIM68,OR52I1	-692,-14911
chr3:49210478-49212194	chr3	+	49210629	49211915	True	NM_173546,NM_022903	chr3,chr3	+,-	KLHDC8B,CCDC71	-1669,-6844
chr22:51172945-51174291	chr22	+	51173113	51174326	True	NM_001003789,NM_001097	chr22,chr22	-,+	RABL2B,ACR	47811,2325
chr17:17942306-17942852	chr17	+	17942316	17942644	True	NM_024052,NM_145691	chr17,chr17	+,-	C17orf39,ATPAF2	-34,28
chr15:90058860-90059390	chr15	+	90059023	90059209	True	NR_027074,NR_027075,NR_027076,NR_027077,NM_152259	chr15,chr15,chr15,chr15,chr15	-,-,-,-,+	LOC283761,LOC283761,LOC283761,LOC283761,C15orf42	8106,8106,8106,8106,59608
chr2:191160376-191160866	chr2	+	191160430	191160842	True	NM_001128928,NM_014362	chr2,chr2	+,-	INPP1,HIBCH	47353,23979
chr2:143947324-143948384	chr2	+	143947323	143948322	True	NM_018460,NM_024659	chr2,chr2	+,-	ARHGAP15,GTDC1	-60479,1046634
chr1:229567767-229567979	chr1	+	229567786	229567948	True	NM_006542,NM_001100	chr1,chr1	+,-	SPHAR,ACTA1	-127708,1945
chr11:74862915-74864025	chr11	+	74863075	74863883	True	NM_001005285,NM_001145212,NM_007256,NM_001145211	chr11,chr11,chr11,chr11	-,+,+,+	OR2AT4,SLCO2B1,SLCO2B1,SLCO2B1	-62317,-1094,-1094,6960
chr11:66035160-66035390	chr11	+	66035264	66035351	True	NM_030981,NM_020470	chr11,chr11	+,-	RAB1B,YIF1A	704,21340
chr17:48710349-48711068	chr17	+	48710474	48710938	True	NM_052855,NM_001144070,NM_003786	chr17,chr17,chr17	-,+,+	ANKRD40,ABCC3,ABCC3	74382,1279,1279
chr9:38623169-38623372	chr9	+	38623214	38623280	True	NR_027294,NM_147195	chr9,chr9	+,-	FAM201A,ANKRD18A	-2184,-2854
chr9:71650018-71650370	chr9	+	71650209	71650403	True	NM_001161706,NM_000144,NM_181425,NM_002732	chr9,chr9,chr9,chr9	+,+,+,-	FXN,FXN,FXN,PRKACG	75,75,75,-21170
chr7:99099972-99100300	chr7	+	99100144	99100317	True	NM_145102,NM_014569,NM_032164	chr7,chr7,chr7	+,+,-	ZKSCAN5,ZKSCAN5,ZNF394	1955,2255,-2267
chr1:14693801-14694817	chr1	+	14694076	14694834	True	NM_015209,NR_027136	chr1,chr1	+,-	KAZN,C1orf126	230378,784176
chr13:23758899-23759622	chr13	+	23758918	23759379	True	NM_000231,NM_014363	chr13,chr13	+,-	SGCG,SACS	-3909,248525
chr7:150079383-150079769	chr7	+	150079417	150079817	True	NM_173680,NM_002889	chr7,chr7	+,-	ZNF775,RARRES2	-3062,-40654
chr1:23497099-23498157	chr1	+	23497258	23498187	True	NM_033631,NM_001142546,NR_036057	chr1,chr1,chr1	-,-,+	LUZP1,LUZP1,MIR3115	-1907,-1907,-126514
chr12:116709353-116710087	chr12	+	116709462	116710090	True	NR_027345,NM_015335	chr12,chr12	+,-	NCRNA00173,MED13L	261136,4951
chr5:49971440-49972114	chr5	+	49971897	49972155	True	NM_024615,NM_198449,NM_001178056	chr5,chr5,chr5	+,-,+	PARP8,EMB,PARP8	-9189,-234663,-9189
chr17:65820538-65820979	chr17	+	65820596	65820966	True	NM_004459,NM_182641,NM_181655	chr17,chr17,chr17	+,+,-	BPTF,BPTF,C17orf58	813,813,168849
chr17:65820538-65820979	chr17	+	66200741	66200983	False	NR_027283,NM_001174166	chr17,chr17	+,-	LOC440461,SLC16A6	-5992,86472
chr19:12794305-12794549	chr19	+	12794305	12794369	True	NM_013407,NM_032332,NM_001930,NM_013406	chr19,chr19,chr19,chr19	-,+,-,-	DHPS,WDR83,DHPS,DHPS	-1628,-13839,-1628,-1628
chr12:7125533-7125735	chr12	+	7125583	7125677	True	NM_001734,NM_005768	chr12,chr12	+,-	C1S,LPCAT3	42302,215
chr2:87089653-87089960	chr2	+	87089879	87090007	True	NR_037931,NM_172101,NM_172102,NM_001178100,NM_172213,NM_004931	chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-	LOC100286979,CD8B,CD8B,CD8B,CD8B,CD8B	-982,-832,-832,-832,-832,-832
chr2:87089653-87089960	chr2	-	107102863	107102991	False	NM_001144013,NR_003506	chr2,chr2	-,+	RGPD3,PLGLA	-18062,-100145
chr1:16069088-16069619	chr1	+	16069340	16069558	True	NM_001089591,NM_001013641,NM_207348	chr1,chr1,chr1	-,+,+	UQCRHL,TMEM82,SLC25A34	64686,-474,-6582
chr1:171749374-171749834	chr1	+	171749410	171749696	True	NM_001007239,NM_014955,NM_015935,NR_033704	chr1,chr1,chr1,chr1	+,+,+,-	METTL13,METTL13,METTL13,VAMP4	1064,1064,1064,-38031
chr12:5473173-5475152	chr12	+	5473424	5474632	True	NM_020373,NM_001102654	chr12,chr12	-,+	ANO2,NTF3	580817,66647
chr2:241526369-241526605	chr2	+	241526388	241526600	True	NM_017844,NM_023083,NM_023085	chr2,chr2,chr2	-,+,+	ANKMY1,CAPN10,CAPN10	-28983,-306,-306
chr4:106067959-106068416	chr4	+	106067973	106068311	True	NM_001127208,NM_006903,NM_017628	chr4,chr4,chr4	+,-,+	TET2,PPA2,TET2	-182,326974,-992
chr7:27239052-27239263	chr7	+	27239135	27239195	True	NM_000522,NR_037843	chr7,chr7	-,+	HOXA13,NCRNA00213	580,860
chr13:29069835-29070174	chr13	+	29069940	29070224	True	NM_015932,NM_001159920,NM_001160031,NM_001160030,NM_002019	chr13,chr13,chr13,chr13,chr13	+,-,-,-,-	POMP,FLT1,FLT1,FLT1,FLT1	162916,-675,-675,-675,-675
chr17:74073414-74073759	chr17	+	74073471	74073789	True	NM_003857,NM_180990,NM_014230	chr17,chr17,chr17	+,+,-	GALR2,ZACN,SRP68	-2630,1473,-4864
chr17:29295228-29295562	chr17	+	29295318	29295390	True	NM_001184992,NM_197939,NM_024683,NM_032322,NR_002221	chr17,chr17,chr17,chr17,chr17	+,+,-,+,+	RNF135,RNF135,C17orf42,RNF135,DPRXP4	2565,2565,-62032,2565,6962
chr9:102588773-102590690	chr9	+	102588887	102590545	True	NM_173199,NM_015051,NM_173200,NM_006981	chr9,chr9,chr9,chr9	+,-,+,+	NR4A3,ERP44,NR4A3,NR4A3	-4810,270835,62,-4810
chr19:44809108-44809317	chr19	+	44809133	44809365	True	NM_004234,NM_181756	chr19,chr19	-,+	ZNF235,ZNF233	-19,-45108
chr1:185703404-185703604	chr1	+	185703423	185703547	True	NM_006469,NM_031935	chr1,chr1	-,+	IVNS1ABP,HMCN1	-416962,135
chr17:7347121-7348314	chr17	+	7347131	7348280	True	NM_004112,NM_001128833,NM_178518,NM_000747	chr17,chr17,chr17,chr17	+,-,+,+	FGF11,ZBTB4,TMEM102,CHRNB1	-4493,34721,-8420,125
chr5:71778496-71780031	chr5	+	71778656	71779670	True	NM_024754,NM_152625	chr5,chr5	+,-	PTCD2,ZNF366	-162507,23629
chr22:30475586-30476065	chr22	+	30475935	30476095	True	NM_152510,NM_002309	chr22,chr22	+,-	HORMAD2,LIF	357,166751
chr3:85779311-85781117	chr3	+	85779638	85780655	True	NR_033860,NM_153184	chr3,chr3	-,+	LOC440970,CADM2	-860912,-4070
chr11:64324127-64324492	chr11	+	64324126	64324538	True	NM_018484,NM_138734	chr11,chr11	+,-	SLC22A11,NRXN2	-1079,86299
chr2:121557775-121558347	chr2	+	121557823	121557883	True	NR_027181,NM_005270	chr2,chr2	-,+	LOC84931,GLI2	-333898,-3007
chr9:108044988-108045445	chr9	+	108045191	108045482	True	NM_080546,NM_005502	chr9,chr9	+,-	SLC44A1,ABCA1	-38316,-354664
chr10:6615982-6617455	chr10	+	6616223	6617457	True	NR_036502,NR_036503,NM_006257	chr10,chr10,chr10	+,+,-	LOC439949,LOC439949,PRKCQ	4929,4929,4831
chr19:49249121-49249930	chr19	+	49249170	49249928	True	NM_019113,NM_000148,NM_017805,NM_182575	chr19,chr19,chr19,chr19	+,-,-,-	FGF21,FUT1,RASIP1,IZUMO1	9415,8769,-5200,288
chr12:508629-510285	chr12	+	508708	510196	True	NM_001130146,NM_001042603,NM_032358	chr12,chr12,chr12	+,-,+	CCDC77,KDM5A,CCDC77	544,-10088,544
chr1:48318239-48318948	chr1	+	48318271	48318907	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	143705,369449
chr16:12995130-12995543	chr16	+	12995130	12995509	True	NM_001145205,NM_001145204,NM_018340	chr16,chr16,chr16	+,+,-	SHISA9,SHISA9,CPPED1	-25,-25,-97386
chr18:48493722-48494282	chr18	+	48493740	48494237	True	NM_018696,NM_001127174	chr18,chr18	+,-	ELAC1,MRO	149,-141986
chr12:50296501-50296974	chr12	+	50296501	50296989	True	NM_000486,NM_012306,NR_026948	chr12,chr12,chr12	+,-,-	AQP2,FAIM2,LOC283332	47534,821,8707
chr17:41742272-41742615	chr17	+	41742341	41742451	True	NM_001136483,NM_013999,NM_001040002,NM_004527	chr17,chr17,chr17,chr17	+,-,-,-	C17orf105,MEOX1,MEOX1,MEOX1	115351,-3410,-3079,-3410
chr12:125475881-125476670	chr12	+	125476116	125476182	True	NM_032656,NM_080626	chr12,chr12	-,+	DHX37,BRI3BP	-2449,2011
chr10:104158155-104158413	chr10	+	104158166	104158410	True	NM_001077493,NM_002502,NM_002779,NM_001077494	chr10,chr10,chr10,chr10	+,+,-,+	NFKB2,NFKB2,PSD,NFKB2	-3988,-2785,20541,-3878
chr2:62940516-62942340	chr2	+	62940759	62941957	True	NM_198276,NM_001142616,NM_001142614,NM_015252	chr2,chr2,chr2,chr2	-,+,+,+	TMEM17,EHBP1,EHBP1,EHBP1	-207155,-7814,-6783,-7814
chr15:50717019-50718144	chr15	+	50717047	50717763	True	NM_005154,NM_181427,NM_001128611,NM_001128610	chr15,chr15,chr15,chr15	+,-,+,+	USP8,GABPB1,USP8,USP8	-519,-69442,-519,-519
chr13:45696691-45697383	chr13	+	45696919	45697425	True	NM_004128,NM_198404	chr13,chr13	+,-	GTF2F2,KCTD4	-2350,77800
chr10:101189636-101189890	chr10	+	101189723	101189929	True	NM_002079,NM_020348	chr10,chr10	-,+	GOT1,CNNM1	651,-100925
chr10:129688085-129689033	chr10	+	129688125	129689073	True	NM_006504,NM_152311	chr10,chr10	+,-	PTPRE,CLRN3	16251,2188
chr9:34624648-34625021	chr9	+	34624720	34625003	True	NM_000155,NM_001017363,NM_024348,NM_007234	chr9,chr9,chr9,chr9	+,-,-,-	GALT,ARID3C,DCTN3,DCTN3	21631,3058,-4224,-4224
chr3:9589794-9590272	chr3	+	9589800	9590320	True	NM_198560,NM_001077525	chr3,chr3	-,+	LHFPL4,MTMR14	5216,100796
chrX:110364765-110366364	chrX	+	110365036	110366364	True	NM_001128172,NM_001128173,NM_001128168,NM_014289	chrX,chrX,chrX,chrX	+,+,+,-	PAK3,PAK3,PAK3,CAPN6	-60,-60,-60,147468
chr13:36705376-36705982	chr13	+	36705415	36706020	True	NM_001111046,NM_004734	chr13,chr13	+,-	CCNA1,DCLK1	299946,77
chr1:166917122-166917521	chr1	+	166917188	166917537	True	NM_199351,NM_032858	chr1,chr1	-,+	ILDR2,MAEL	27074,40981
chr2:69746126-69747792	chr2	+	69746363	69747427	True	NR_003705,NM_001153	chr2,chr2	-,+	SNORA36C,ANXA4	-74,221699
chr2:100725136-100725579	chr2	+	100725145	100725359	True	NM_001011717,NM_001025108	chr2,chr2	+,-	NMS,AFF3	361584,-3100
chr1:156268815-156269046	chr1	+	156268978	156269076	True	NM_144580,NM_032323,NM_001004319	chr1,chr1,chr1	-,+,-	C1orf85,TMEM79,VHLL	-3529,-14959,402
chr12:51477537-51477831	chr12	+	51477585	51477792	True	NM_030809,NM_015416	chr12,chr12	-,+	CSRNP2,LETMD1	-252,-35558
chr4:113707238-113707644	chr4	+	113707282	113707553	True	NR_029857,NM_001127493	chr4,chr4	-,+	MIR302B,ANK2	-137569,31685
chr9:139096483-139096814	chr9	+	139096561	139096771	True	NM_015597,NM_014564,NM_178138	chr9,chr9,chr9	+,-,-	GPSM1,LHX3,LHX3	125160,-1557,234
chr1:11318140-11319370	chr1	+	11318178	11319285	True	NM_004958,NM_013319	chr1,chr1	-,+	MTOR,UBIAD1	3374,13969
chr12:57984206-57984710	chr12	+	57984246	57984704	True	NM_001146259,NM_001146258,NM_024779,NM_001146260,NM_001478	chr12,chr12,chr12,chr12,chr12	+,+,+,+,-	PIP4K2C,PIP4K2C,PIP4K2C,PIP4K2C,B4GALNT1	237,237,237,237,42332
chr16:49402379-49403675	chr16	+	49402985	49403698	True	NM_144602,NM_004352	chr16,chr16	+,-	C16orf78,CBLN1	4109,-87243
chr1:162349122-162349722	chr1	+	162349188	162349708	True	NM_001135240,NM_001085375,NM_182581	chr1,chr1,chr1	+,+,-	C1orf226,C1orf226,C1orf111	-553,1811,-2544
chr19:7586663-7587270	chr19	+	7586706	7587222	True	NM_018083,NM_080662,NM_020533	chr19,chr19,chr19	+,-,+	ZNF358,PEX11G,MCOLN1	-5753,-32801,273
chr19:35991534-35992010	chr19	+	35991611	35992019	True	NM_014364,NR_033746,NM_001035516,NM_001126059	chr19,chr19,chr19,chr19	+,-,-,-	GAPDHS,DMKN,DMKN,DMKN	32294,9443,844,9422
chr17:41057985-41058314	chr17	+	41058077	41058338	True	NR_027254,NM_000151	chr17,chr17	-,+	LOC388387,G6PC	-7326,-5316
chr20:6750437-6750694	chr20	+	6750521	6750651	True	NM_017671,NM_001200	chr20,chr20	-,+	FERMT1,BMP2	-646330,-1827
chr8:139927055-139927304	chr8	+	139927104	139927350	True	NM_017444,NM_152888	chr8,chr8	+,-	CHRAC1,COL22A1	1594050,-868
chr12:107381469-107383301	chr12	+	107381468	107382982	True	NM_025198,NM_001033050,NM_152261	chr12,chr12,chr12	-,-,+	MTERFD3,MTERFD3,C12orf23	-539,-539,-31976
chr9:95645187-95645511	chr9	+	95645228	95645354	True	NM_001083536,NM_001007101,NM_031486	chr9,chr9,chr9	+,-,-	FGD3,ZNF484,ZNF484	64246,-4958,-4938
chr11:8828691-8829099	chr11	+	8828691	8829095	True	NM_139157,NM_213618,NM_020642	chr11,chr11,chr11	-,-,+	ST5,ST5,C11orf17	3837,3179,103605
chr12:121153427-121153687	chr12	+	121153663	121153733	True	NM_001080533,NM_000017,NM_198202	chr12,chr12,chr12	+,+,-	UNC119B,ACADS,POP5	-5883,9837,-134462
chr7:48081113-48082426	chr7	+	48081236	48082361	True	NM_152782,NM_001100159	chr7,chr7	-,+	SUN3,C7orf57	-12520,-6170
chr4:48486520-48486838	chr4	+	48486533	48486805	True	NM_175619,NM_152679,NM_003215	chr4,chr4,chr4	+,+,-	ZAR1,SLC10A4,TEC	5503,-1224,-214719
chr19:591778-592020	chr19	+	591922	591982	True	NM_001194,NM_005035	chr19,chr19	+,-	HCN2,POLRMT	-2080,41636
chr9:130828210-130828536	chr9	+	130828220	130828552	True	NM_197956,NM_001006641	chr9,chr9	-,+	NAIF1,SLC25A25	1097,1926
chr7:137769123-137769523	chr7	+	137769245	137769441	True	NM_005989,NM_194071,NM_001190906,NM_001190907	chr7,chr7,chr7,chr7	+,-,+,+	AKR1D1,CREB3L2,AKR1D1,AKR1D1	-8125,-82399,-8125,-8125
chr2:10262812-10263112	chr2	+	10262886	10263160	True	NM_001034,NM_001165931,NM_001037160	chr2,chr2,chr2	+,+,-	RRM2,RRM2,CYS1	-74,-242,-42348
chr9:125487083-125488491	chr9	+	125487216	125487370	True	NM_001004450,NM_001005235	chr9,chr9	-,+	OR1B1,OR1L4	-95402,-1007
chr17:46705752-46707010	chr17	+	46705777	46706710	True	NM_024017,NR_033205,NR_029582	chr17,chr17,chr17	-,+,-	HOXB9,LOC404266,MIR196A1	-1942,-32508,3261
chr7:99571958-99572616	chr7	+	99572280	99572663	True	NM_001185,NR_036679	chr7,chr7	-,+	AZGP1,AZGP1P1	1122,5721
chr2:29296258-29296491	chr2	+	29296275	29296539	True	NM_001029883,NM_024692	chr2,chr2	-,+	C2orf71,CLIP4	638,41768
chr6:168688299-168688774	chr6	+	168688365	168688755	True	NM_214462,NM_001166412	chr6,chr6	-,+	DACT2,SMOC2	31697,153075
chr17:72210372-72210658	chr17	+	72210440	72210666	True	NR_026914,NM_032646	chr17,chr17	-,+	MGC16275,TTYH2	-980,-795
chr17:56066137-56067148	chr17	+	56066156	56067168	True	NM_007146,NM_080677	chr17,chr17	-,+	VEZF1,DYNLL2	-541,93611
chr9:6756436-6757376	chr9	+	6756777	6757273	True	NM_000170,NM_015061,NM_001146695,NM_001146694	chr9,chr9,chr9,chr9	-,+,+,+	GLDC,KDM4C,KDM4C,KDM4C	-111085,367,367,367
chr1:156250116-156251776	chr1	+	156250224	156251592	True	NR_026678,NM_015327,NM_032323	chr1,chr1,chr1	+,-,+	TMEM79,SMG5,TMEM79	1111,1078,2477
chr1:42630041-42630284	chr1	+	42630086	42630214	True	NM_007102,NM_033553	chr1,chr1	+,-	GUCA2B,GUCA2A	-11045,231
chr12:111845202-111846149	chr12	+	111845485	111846014	True	NM_144671,NM_005475	chr12,chr12	-,+	FAM109A,SH2B3	-38560,-1784
chr16:89284535-89284919	chr16	+	89284563	89284885	True	NR_037705,NM_001201407,NM_005187,NM_182531	chr16,chr16,chr16,chr16	+,+,-,+	ZNF778,ZNF778,CBFA2T3,ZNF778	-503,-503,-241059,-503
chr17:7327631-7328919	chr17	+	7328228	7328920	True	NM_152766,NM_199339,NM_175734,NM_178518	chr17,chr17,chr17,chr17	-,+,+,+	C17orf61,SPEM1,C17orf74,TMEM102	-20778,-4600,14,9841
chr10:105220213-105221105	chr10	+	105220278	105220803	True	NR_024552,NM_001001412,NM_004210,NM_015916	chr10,chr10,chr10,chr10	-,-,+,-	CALHM2,CALHM1,NEURL,CALHM2	-8116,-1630,32931,-8116
chr12:7864804-7865084	chr12	+	7864843	7865041	True	NM_199286,NM_020634	chr12,chr12	+,-	DPPA3,GDF3	-806,-16483
chr14:50555373-50556774	chr14	+	50555397	50556412	True	NM_001014830,NM_001663	chr14,chr14	-,+	C14orf183,ARF6	3006,-195712
chr5:154320804-154322789	chr5	+	154320826	154322191	True	NM_001014990,NM_015465,NM_014180	chr5,chr5,chr5	+,-,+	MRPL22,GEMIN5,MRPL22	-244,-3050,-244
chr19:58696645-58697117	chr19	+	58696847	58697118	True	NM_024620,NM_016325,NM_133502,NM_016324	chr19,chr19,chr19,chr19	-,+,+,+	ZNF329,ZNF274,ZNF274,ZNF274	-34699,-2511,-2511,-2511
chr11:125753691-125754224	chr11	+	125753779	125754125	True	NM_145014,NM_001134793,NM_031307	chr11,chr11,chr11	+,+,-	HYLS1,HYLS1,PUS3	-332,2829,19053
chr22:22863284-22864450	chr22	+	22863502	22864228	True	NR_027426,NM_080764	chr22,chr22	+,-	LOC648691,ZNF280B	37527,3
chrX:135335915-135336402	chrX	+	135336176	135336255	True	NM_024597,NM_001173516,NM_001173517,NM_153834	chrX,chrX,chrX,chrX	-,-,-,+	MAP7D3,MAP7D3,MAP7D3,GPR112	-2438,2436,-2438,46866
chr16:67195675-67195952	chr16	+	67195716	67195928	True	NM_001040667,NM_001538,NM_003789,NM_018378,NM_001185058	chr16,chr16,chr16,chr16,chr16	+,+,-,+,+	HSF4,HSF4,TRADD,FBXL8,NOL3	1359,1359,-1904,-1876,8476
chr16:76270790-76272215	chr16	+	76270902	76272018	True	NM_005548,NM_033401	chr16,chr16	-,+	KARS,CNTNAP4	-589317,39157
chr9:214283-214610	chr9	+	214369	214639	True	NM_203447,NM_152569	chr9,chr9	+,-	DOCK8,C9orf66	225,1304
chr9:140150560-140150951	chr9	+	140150726	140150984	True	NM_015456,NM_001004353,NM_001001710	chr9,chr9,chr9	+,+,-	COBRA1,C9orf173,FAM166A	-1018,-5047,-8504
chr22:21087105-21088144	chr22	+	21087275	21088095	True	NM_002650,NR_026815	chr22,chr22	-,+	PI4KA,TMEM191A	910,-31924
chr22:21087105-21088144	chr22	+	20397129	20397949	False	NR_003563,NR_026919	chr22,chr22	-,+	PI4KAP1,LOC150197	796,-203325
chr22:21087105-21088144	chr22	+	21841105	21841925	False	NM_015094,NR_003700	chr22,chr22	+,-	HIC2,PI4KAP2	-69463,29905
chr21:46063976-46065458	chr21	+	46064154	46065280	True	NM_198698,NM_181688,NM_198692	chr21,chr21,chr21	-,+,+	KRTAP12-4,KRTAP10-10,KRTAP10-11	9346,-6932,1050
chr3:42607888-42609418	chr3	+	42608736	42609147	True	NM_016305,NM_001201584	chr3,chr3	+,-	SS18L2,SEC22C	23150,14431
chr22:43540567-43541428	chr22	+	43540991	43541366	True	NM_173467,NM_014507,NM_007311,NM_000714	chr22,chr22,chr22,chr22	-,-,+,+	MCAT,MCAT,TSPO,TSPO	-1588,-1588,6168,6168
chr1:24039074-24039799	chr1	+	24039121	24039503	True	NM_001199802,NM_001127621	chr1,chr1	+,-	RPL11,GALE	-20903,86607
chr19:43968882-43969372	chr19	+	43968887	43969067	True	NM_001130011,NM_014400	chr19,chr19	+,-	TEX101,LYPD3	-49903,814
chr5:76116035-76116864	chr5	+	76116184	76116882	True	NM_005242,NM_004101	chr5,chr5	+,-	F2RL1,F2RL2	-1409,-196944
chr1:151827185-151828013	chr1	+	151827279	151827790	True	NR_024237,NM_182578	chr1,chr1	+,-	LOC100132111,THEM5	-16386,-1106
chr11:2424974-2425184	chr11	+	2425062	2425160	True	NM_005706,NM_014555	chr11,chr11	+,-	TSSC4,TRPM5	-1590,19165
chr1:155878512-155878888	chr1	+	155878644	155878893	True	NM_006912,NM_181885	chr1,chr1	-,+	RIT1,RXFP4	2335,32586
chr14:30376414-30378258	chr14	+	30376429	30378041	True	NM_017769,NM_002742	chr14,chr14	+,-	G2E3,PRKD1	650287,18915
chr15:78857908-78858173	chr15	+	78857935	78858185	True	NM_001166694,NM_000745	chr15,chr15	-,+	CHRNA3,CHRNA5	55502,-124
chr9:88696202-88697696	chr9	+	88696837	88697285	True	NM_024635,NM_016548	chr9,chr9	+,-	NAA35,GOLM1	-140833,17276
chr8:41385858-41386168	chr8	+	41385925	41386007	True	NM_152568,NM_032336	chr8,chr8	-,+	NKX6-3,GINS4	118921,717
chr16:8894805-8895443	chr16	+	8894893	8895268	True	NM_000303,NM_015421	chr16,chr16	+,-	PMM2,TMEM186	-3289,-3388
chr21:32927956-32928330	chr21	+	32928024	32928378	True	NM_000454,NM_003253	chr21,chr21	+,-	SOD1,TIAM1	103556,2962
chr3:97199806-97200339	chr3	+	97200055	97200235	True	NM_001042533,NM_173655	chr3,chr3	-,+	MINA,EPHA6	491049,-41621
chr4:49283620-49284007	chr4	+	49283932	49284040	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-295718,-375117
chr4:49283620-49284007	chr4	-	49330256	49330364	False	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-342042,-421441
chr7:43763118-43763381	chr7	+	43763118	43763202	True	NM_000712,NM_018224	chr7,chr7	+,-	BLVRA,C7orf44	35069,5939
chr11:117794793-117795395	chr11	+	117794912	117795328	True	NM_001558,NM_001077263	chr11,chr11	+,-	IL10RA,TMPRSS13	61777,4837
chr2:10861205-10861468	chr2	+	10861210	10861404	True	NM_001039362,NM_144583,NM_024894	chr2,chr2,chr2	+,+,-	ATP6V1C2,ATP6V1C2,NOL10	370,370,-31098
chr14:102827900-102829089	chr14	+	102828219	102828961	True	NM_001177612,NM_001177611,NM_032630,NM_014844,NM_001172631	chr14,chr14,chr14,chr14,chr14	-,-,-,+,+	CINP,CINP,CINP,TECPR2,TECPR2	342,140,342,338,338
chr11:128813844-128814193	chr11	+	128813844	128814094	True	NM_000890,NM_001195194,NM_001195195,NM_022112	chr11,chr11,chr11,chr11	+,-,-,-	KCNJ5,TP53AIP1,TP53AIP1,TP53AIP1	-52583,-6115,-550,-550
chr2:217500404-217500637	chr2	+	217500403	217500653	True	NM_000597,NM_000599	chr2,chr2	+,-	IGFBP2,IGFBP5	-2327,59669
chr19:10531826-10532541	chr19	+	10532041	10532557	True	NM_007065,NM_001111307,NM_001111308	chr19,chr19,chr19	-,+,+	CDC37,PDE4A,PDE4A	-17770,-759,8963
chr17:29719542-29719811	chr17	+	29719696	29719818	True	NM_014210,NM_032932	chr17,chr17	-,+	EVI2A,RAB11FIP4	-70929,-1105
chr11:43906820-43907535	chr11	+	43906910	43907468	True	NM_021926,NM_139178	chr11,chr11	-,+	ALX4,ALKBH3	424298,-4611
chr3:8809236-8809784	chr3	+	8809235	8809693	True	NM_001234,NM_000916	chr3,chr3	+,-	CAV3,OXTR	-33790,1657
chr7:38725355-38725628	chr7	+	38725398	38725558	True	NR_028347,NM_001166018	chr7,chr7	-,+	FAM183B,POU6F2	1181,292050
chr10:85899470-85899690	chr10	+	85899556	85899730	True	NM_001017924,NM_014394	chr10,chr10	-,+	LRIT2,GHITM	85604,-422
chr12:104238169-104239824	chr12	+	104238174	104239080	True	NM_003299,NM_001031701	chr12,chr12	+,-	HSP90B1,NT5DC3	85108,-3199
chr5:180224374-180224715	chr5	+	180224445	180224679	True	NM_001114619,NR_027183,NM_001114620,NM_002406	chr5,chr5,chr5,chr5	-,+,-,-	MGAT1,LOC729678,MGAT1,MGAT1	6273,32279,6273,5419
chr3:75484951-75485165	chr3	+	75485068	75485150	True	NR_031714,NR_024241	chr3,chr3	+,-	MIR1324,FAM86DP	194763,-802
chr19:58507109-58507791	chr19	+	58507238	58507575	True	NR_036508,NM_025027	chr19,chr19	+,-	LOC100128398,ZNF606	6686,7189
chr17:62327943-62328940	chr17	+	62327973	62328943	True	NM_018469,NR_002995	chr17,chr17	-,+	TEX2,SNORA76	11760,-104326
chr1:224312575-224313434	chr1	+	224312655	224313287	True	NR_031574,NM_015176	chr1,chr1	-,+	MIR320B2,FBXO28	131606,-10915
chr6:2990053-2990753	chr6	+	2990089	2990735	True	NR_026855,NR_026856,NM_004568,NM_000904	chr6,chr6,chr6,chr6	+,+,-,+	DKFZP686I15217,DKFZP686I15217,SERPINB6,NQO2	-1939,-1939,-17690,9331
chr1:151511012-151511492	chr1	+	151511072	151511404	True	NM_001126337,NM_145796,NM_020127,NR_030280	chr1,chr1,chr1,chr1	+,-,+,+	TUFT1,POGZ,TUFT1,MIR554	1376,-79131,1376,6867
chr17:7381289-7381671	chr17	+	7381292	7381626	True	NM_000937,NM_020899,NM_001128833,NM_001102614	chr17,chr17,chr17,chr17	+,-,-,+	POLR2A,ZBTB4,ZBTB4,AMAC1L3	6071,5992,1368,3094
chr2:177054872-177056668	chr2	+	177054991	177056705	True	NR_033979,NM_024501	chr2,chr2	-,+	LOC401022,HOXD1	-1305,-1742
chr3:135692664-135693264	chr3	+	135692663	135693251	True	NM_002718,NM_001145417,NM_001190447	chr3,chr3,chr3	+,-,+	PPP2R3A,MSL2,PPP2R3A	-8205,220109,-8205
chr6:41245232-41247182	chr6	+	41245274	41247198	True	NR_002794,NM_018643	chr6,chr6	+,-	TREML2P1,TREM1	-28211,7309
chr2:230564239-230565491	chr2	+	230564463	230565324	True	NM_174899,NM_139072	chr2,chr2	+,-	FBXO36,DNER	221882,14022
chr7:76052661-76053250	chr7	+	76052676	76052942	True	NM_080744,NM_001110354	chr7,chr7	-,+	SRCRB4D,ZP3	-13664,1329
chr2:74211216-74211496	chr2	+	74211249	74211391	True	NM_080918,NM_001035505	chr2,chr2	+,-	DGUOK,BOLA3	-57347,163698
chr6:41082150-41082813	chr6	+	41082415	41082657	True	NR_026938,NM_178174	chr6,chr6	+,-	LOC221442,TREML1	-13701,39463
chr2:173965606-173966617	chr2	+	173965670	173966643	True	NR_033882,NM_016653	chr2,chr2	-,+	LOC339751,ZAK	180172,-25158
chr16:75570347-75570874	chr16	+	75570430	75570767	True	NM_024533,NM_007285	chr16,chr16	-,+	CHST5,GABARAPL2	-1362,29481
chr4:989500-990904	chr4	+	989530	990876	True	NM_022042,NM_000203,NM_134425,NM_213613	chr4,chr4,chr4,chr4	-,+,-,-	SLC26A1,IDUA,SLC26A1,SLC26A1	-2347,-8796,-2347,-2306
chr3:130458338-130459300	chr3	+	130458503	130459307	True	NM_014602,NM_001199181	chr3,chr3	-,+	PIK3R4,ATP2C1	6441,110061
chr2:216002861-216004489	chr2	+	216003104	216004294	True	NM_173076,NM_004044	chr2,chr2	-,+	ABCA12,ATIC	47,172384
chrX:16969023-16970372	chrX	+	16969200	16969991	True	NM_004726,NM_002893,NM_001080975	chrX,chrX,chrX	+,-,+	REPS2,RBBP7,REPS2	-4445,-80666,-4445
chr6:43965576-43965797	chr6	+	43965610	43965678	True	NM_001171992,NM_153246,NM_032111	chr6,chr6,chr6	+,+,-	C6orf223,C6orf223,MRPL14	2658,2658,129563
chr6:134668171-134668788	chr6	+	134668236	134668726	True	NM_004865,NM_001143676	chr6,chr6	+,-	TBPL1,SGK1	-393986,-29040
chr2:113191594-113192000	chr2	+	113191703	113191818	True	NM_153712,NM_005054,NM_001164463	chr2,chr2,chr2	+,-,-	TTL,RGPD5,RGPD8	47924,-596,-481
chr3:100427905-100428122	chr3	+	100428003	100428143	True	NM_006070,NM_001007565,NM_015429,NM_001195479,NM_001195478	chr3,chr3,chr3,chr3,chr3	+,+,-,+,+	TFG,TFG,ABI3BP,TFG,TFG	31,-2,284241,31,242
chr15:74423015-74423396	chr15	+	74423059	74423379	True	NM_001130137,NM_001130136,NM_001130138,NR_027073,NM_020851	chr15,chr15,chr15,chr15,chr15	+,+,+,-,+	ISLR2,ISLR2,ISLR2,LOC283731,ISLR2	-1119,-1400,-525,-1440,-372
chr5:173334192-173334465	chr5	+	173334425	173334511	True	NM_030627,NM_138369	chr5,chr5	+,-	CPEB4,BOD1	-19158,-290759
chr11:110300148-110300595	chr11	+	110300151	110300487	True	NM_002906,NM_004109	chr11,chr11	-,+	RDX,FDX1	-132714,106
chr17:56271129-56272111	chr17	+	56271148	56272049	True	NM_000502,NM_017777	chr17,chr17	+,-	EPX,MKS1	-1110,24680
chr11:63751346-63752010	chr11	+	63751350	63751818	True	NM_017670,NR_003089,NM_173587,NM_004074	chr11,chr11,chr11,chr11	+,+,-,+	OTUB1,OTUB1,RCOR2,COX8A	1506,1506,-67034,-9322
chr6:128814629-128816132	chr6	+	128814875	128816011	True	NM_002844,NM_000426	chr6,chr6	-,+	PTPRK,LAMA2	25863,388274
chr10:3213288-3213726	chr10	+	3213288	3213594	True	NM_002627,NM_014889	chr10,chr10	+,-	PFKP,PITRM1	-103593,1460
chr19:30092753-30093511	chr19	+	30093058	30093533	True	NM_001031726,NR_027368,NM_006627	chr19,chr19,chr19	-,+,+	C19orf12,POP4,POP4	112480,3636,3636
chr18:3880662-3881215	chr18	+	3881028	3881107	True	NR_024101,NM_004746	chr18,chr18	+,-	FLJ35776,DLGAP1	-286974,-893
chrX:48857187-48858122	chrX	+	48857348	48858086	True	NM_001163322,NM_207672,NM_020137	chrX,chrX,chrX	+,-,-	CCDC120,GRIPAP1,GRIPAP1	58429,639,639
chr13:31782306-31782583	chr13	+	31782315	31782557	True	NM_194318,NM_006644	chr13,chr13	+,-	B3GALTL,HSPH1	-8254,-46198
chr22:24317499-24318271	chr22	+	24317590	24318209	True	NM_001084393,NM_001355,NM_000854,NM_001084392	chr22,chr22,chr22,chr22	+,-,+,-	DDTL,DDT,GSTT2,DDT	-8615,3860,4104,-910
chr22:24317499-24318271	chr22	-	24307497	24308115	False	NM_000854,NM_001080843,NM_001084393,NM_001084392	chr22,chr22,chr22,chr22	-,-,+,-	GSTT2,GSTT2B,DDTL,DDT	-4104,-4129,910,8615
chr20:3022990-3023230	chr20	+	3023083	3023267	True	NM_001501,NM_178331,NM_000490,NM_178332,NM_030811	chr20,chr20,chr20,chr20,chr20	+,+,-,+,+	GNRH2,GNRH2,AVP,GNRH2,MRPS26	1000,1000,42153,1000,3407
chr7:100075814-100076045	chr7	+	100075879	100075943	True	NM_030935,NM_173564	chr7,chr7	-,+	TSC22D4,C7orf51	1009,5606
chr19:4455735-4456621	chr19	+	4455896	4456616	True	NM_025241,NM_001171091,NM_001001520	chr19,chr19,chr19	-,-,+	UBXN6,UBXN6,HDGFRP2	1225,-601,15638
chr5:138741225-138741440	chr5	+	138741238	138741334	True	NM_001033112,NM_194296	chr5,chr5	+,-	PAIP2,SPATA24	-63155,-1462
chr7:102561846-102563347	chr7	+	102562248	102563148	True	NM_001031692,NM_145032,NM_005824	chr7,chr7,chr7	+,-,+	LRRC17,FBXL13,LRRC17	-8965,151925,-8965
chr16:28506115-28507024	chr16	+	28506153	28506885	True	NM_001042432,NM_018690,NM_000086	chr16,chr16,chr16	-,+,-	CLN3,APOBR,CLN3	-2530,-211,-2750
chr5:78929398-78930268	chr5	+	78929570	78930062	True	NM_004272,NM_173797	chr5,chr5	-,+	HOMER1,PAPD4	-119870,-21378
chr3:111320773-111321539	chr3	+	111320960	111321580	True	NM_024508,NM_198196	chr3,chr3	-,+	ZBED2,CD96	-6794,-60086
chr19:51855084-51856040	chr19	+	51855117	51855809	True	NM_001014763,NM_001163922,NM_001101372	chr19,chr19,chr19	-,-,+	ETFB,VSIG10L,IGLON5	2337,-9739,-40066
chr2:198052319-198052724	chr2	+	198052614	198052765	True	NM_001195144,NM_025147	chr2,chr2	-,+	ANKRD44,COQ10B	122807,265465
chr2:228189572-228190024	chr2	+	228189584	228189970	True	NM_020194,NM_024795	chr2,chr2	+,-	MFF,TM4SF20	2257,54102
chr7:100209663-100209937	chr7	+	100209665	100209901	True	NM_001040098,NM_001040097,NM_002593,NM_023948,NM_002319,NM_001040099	chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,-,+	MOSPD3,MOSPD3,PCOLCE,MOSPD3,LRCH4,MOSPD3	151,9,-9834,212,-25889,212
chr16:31454594-31454829	chr16	+	31454594	31454658	True	NM_001136509,NM_001105247	chr16,chr16	-,+	ZNF843,ARMC5	-246,15658
chr3:184015768-184016209	chr3	+	184015909	184016183	True	NM_033259,NM_002808	chr3,chr3	-,+	CAMK2N2,PSMD2	-36658,838
chr19:42257319-42258024	chr19	+	42257332	42258013	True	NM_002483,NM_006890	chr19,chr19	+,-	CEACAM6,CEACAM7	1384,-65236
chr19:18197708-18198060	chr19	+	18197763	18198025	True	NM_015016,NM_005535,NM_153701	chr19,chr19,chr19	+,-,-	MAST3,IL12RB1,IL12RB1	10577,-66,-66
chr2:217475732-217475957	chr2	+	217475735	217475995	True	NM_000597,NM_000599	chr2,chr2	+,-	IGFBP2,IGFBP5	22131,84327
chr1:225965594-225966815	chr1	+	225965679	225966788	True	NM_003133,NM_001130440,NM_014698	chr1,chr1,chr1	+,+,-	SRP9,SRP9,TMEM63A	-215,-215,103691
chr9:35815566-35816113	chr9	+	35815648	35815933	True	NM_001039592,NM_016446,NM_032593,NM_172312	chr9,chr9,chr9,chr9	-,+,-,-	SPAG8,TMEM8B,HINT2,SPAG8	-3389,13288,-606,-3389
chr1:160916425-160916838	chr1	+	160916568	160916652	True	NM_080878,NM_002348	chr1,chr1	-,+	ITLN2,LY9	7987,-150704
chr2:100754673-100755125	chr2	+	100754848	100755115	True	NM_002285,NM_001011717	chr2,chr2	-,+	AFF3,NMS	3979,331828
chr8:11625881-11626632	chr8	+	11626066	11626636	True	NM_001135747,NM_001135746,NM_145043,NM_001908,NM_001135748	chr8,chr8,chr8,chr8,chr8	+,+,+,-,+	NEIL2,NEIL2,NEIL2,CTSB,NEIL2	535,535,535,99060,535
chr1:162485746-162487011	chr1	+	162485844	162486665	True	NM_175866,NM_053282	chr1,chr1	+,-	UHMK1,SH2D1B	-18304,-103916
chr11:86371308-86372392	chr11	+	86371382	86372344	True	NM_001014811,NM_007173	chr11,chr11	-,+	ME3,PRSS23	10946,139146
chr2:85897740-85899153	chr2	+	85898008	85899169	True	NM_000542,NM_198843,NM_006433	chr2,chr2,chr2	-,-,+	SFTPB,SFTPB,GNLY	-2144,-2144,22244
chr9:95087343-95087954	chr9	+	95087426	95087876	True	NR_024020,NM_001012267,NM_017948	chr9,chr9,chr9	-,+,-	NOL8,CENPP,NOL8	50,6,50
chr14:94561740-94562761	chr14	+	94561754	94562662	True	NM_020414,NM_206949,NM_001130080	chr14,chr14,chr14	-,+,+	DDX24,IFI27L1,IFI27	-14196,-14166,14416
chr12:42987804-42988885	chr12	+	42987832	42988824	True	NM_016488,NM_153026	chr12,chr12	+,-	PPHLN1,PRICKLE1	-267943,-4260
chr12:109535718-109536072	chr12	+	109535718	109536091	True	NM_001205179,NM_080911,NM_001205180,NM_001145375,NM_001145374,NM_003362,NM_001001655,NR_026930,NR_026931	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,+,-,-,-,+,-,-,-	ALKBH2,UNG,ALKBH2,ALKBH2,ALKBH2,UNG,ALKBH2,ALKBH2,ALKBH2	-4425,-370,-4425,-4425,-4425,40,-4425,-4425,-4425
chr11:31526504-31527866	chr11	+	31526506	31527745	True	NM_144981,NM_019040	chr11,chr11	-,+	IMMP1L,ELP4	3484,3551
chr1:205604588-205604929	chr1	+	205604682	205604967	True	NM_021795,NM_001973,NM_181644	chr1,chr1,chr1	-,-,+	ELK4,ELK4,MFSD4	-2682,-2682,-66629
chr11:7716001-7716917	chr11	+	7716253	7716887	True	NM_198185,NR_027711	chr11,chr11	-,+	OVCH2,OR5E1P	11106,153710
chr17:79355604-79355854	chr17	+	79355607	79355859	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	17680,-51133
chr17:42422192-42422663	chr17	+	42422283	42422611	True	NM_198475,NM_002087	chr17,chr17	-,+	FAM171A2,GRN	18674,9
chr2:220362946-220363214	chr2	+	220362977	220363205	True	NM_013335,NM_205847,NM_001195731	chr2,chr2,chr2	+,+,-	GMPPA,GMPPA,CHPF	381,411,44664
chr4:65211254-65212136	chr4	+	65211463	65212131	True	NR_034138,NM_001010874	chr4,chr4	+,-	LOC100144602,TECRL	1323547,63097
chr17:41467634-41468552	chr17	+	41467822	41467902	True	NR_027412,NR_027413,NM_001661	chr17,chr17,chr17	-,-,+	LOC100130581,LOC100130581,ARL4D	-1556,-1556,8450
chr16:690037-690973	chr16	+	690345	690779	True	NM_001040165,NM_001040160,NM_032366,NM_001040162,NM_053284,NM_138418,NM_145294,NM_001040161	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	-,-,-,-,+,+,+,-	C16orf13,C16orf13,C16orf13,C16orf13,WFIKKN1,FAM195A,WDR90,C16orf13	-3998,-3998,-3998,-3998,-9390,1069,8583,-3998
chr2:61302591-61303685	chr2	+	61302680	61303058	True	NM_032506,NM_144709,NM_001129993	chr2,chr2,chr2	+,-,+	KIAA1841,PUS10,KIAA1841	-9371,-57315,-9728
chr4:128983225-128983436	chr4	+	128983254	128983474	True	NM_032239,NM_018078,NM_178043,NM_152778	chr4,chr4,chr4,chr4	+,+,+,-	LARP1B,LARP1B,LARP1B,MFSD8	-802,-802,-802,-96115
chr10:5930174-5930685	chr10	+	5930272	5930722	True	NM_019046,NM_001009941,NM_178150,NM_001009943,NM_032807	chr10,chr10,chr10,chr10,chr10	-,-,+,-,+	ANKRD16,ANKRD16,FBXO18,ANKRD16,FBXO18	1188,1188,1491,1188,5626
chr21:45598370-45599105	chr21	+	45598387	45598937	True	NM_198155,NM_015259	chr21,chr21	+,-	C21orf33,ICOSLG	-44944,61947
chr22:38714547-38715219	chr22	+	38714594	38715256	True	NM_152221,NM_001161573,NM_001894	chr22,chr22,chr22	-,+,-	CSNK1E,MAFF,CSNK1E	-1181,-115618,-505
chr19:35847982-35849469	chr19	+	35848379	35849447	True	NM_005303,NM_152481,NM_005304	chr19,chr19,chr19	+,-,+	FFAR1,FAM187B,FFAR3	-5992,-128751,40
chr11:65550007-65550432	chr11	+	65550090	65550468	True	NM_138368,NM_004561	chr11,chr11	-,+	DKFZp761E198,OVOL1	-2268,4060
chr9:46385233-46386358	chr9	+	46385399	46386254	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2754669,301311
chr9:46385233-46386358	chr9	+	67784652	67785369	False	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	8870,141391
chr9:46385233-46386358	chr9	-	44999031	44999748	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-8846,-1368301
chr9:46385233-46386358	chr9	-	45734470	45735187	False	NM_001145196,NR_024060	chr9,chr9	-,+	FAM75A6,FAM27A	-2103740,-7492
chr9:46385233-46386358	chr9	-	46118061	46118913	False	NM_001145196,NR_024060	chr9,chr9	-,+	FAM75A6,FAM27A	-2487331,-391147
chr8:19673993-19674327	chr8	+	19674100	19674344	True	NR_024040,NM_018142	chr8,chr8	-,+	CSGALNACT1,INTS10	-133839,573
chr13:42015726-42016930	chr13	+	42016310	42016736	True	NM_004294,NR_002163	chr13,chr13	-,+	MTRF1,OR7E37P	-178597,19
chr14:105552815-105553148	chr14	+	105552930	105553078	True	NM_174891,NM_013345	chr14,chr14	+,-	C14orf79,GPR132	-100371,-21176
chr6:84761994-84762742	chr6	+	84762205	84762731	True	NM_014895,NM_138409	chr6,chr6	-,+	KIAA1009,MRAP2	174660,-18843
chr17:30186335-30187770	chr17	+	30186443	30187433	True	NM_018405,NM_015355	chr17,chr17	-,+	C17orf79,SUZ12	-117,76610
chr22:30662100-30662376	chr22	+	30662163	30662313	True	NM_020530,NM_001017437	chr22,chr22	-,+	OSM,CCDC157	566,90313
chr16:14008909-14009387	chr16	+	14009129	14009417	True	NM_005236,NM_001134477	chr16,chr16	+,-	ERCC4,PARN	4596,714753
chrX:54556177-54556454	chrX	+	54556221	54556463	True	NM_004463,NM_019067,NM_001184819	chrX,chrX,chrX	-,+,+	FGD1,GNL3L,GNL3L	-33622,180,180
chr13:21751828-21752431	chr13	+	21752117	21752317	True	NM_001166017,NM_145061,NM_024026	chr13,chr13,chr13	-,-,+	SKA3,SKA3,MRP63	-1376,-1376,-1799
chr20:13990469-13992265	chr20	+	13990690	13992166	True	NM_080676,NM_025229	chr20,chr20	+,-	MACROD2,SEL1L2	-14595,-19428
chr12:53835100-53835340	chr12	+	53835139	53835381	True	NM_001193511,NM_001005354,NM_018457	chr12,chr12,chr12	-,+,+	MAP3K12,PRR13,PRR13	58113,51,51
chr17:73179848-73180117	chr17	+	73179867	73180115	True	NM_001005849,NM_024844,NM_006937	chr17,chr17,chr17	-,+,-	SUMO2,NUP85,SUMO2	-769,21481,-769
chr2:114347607-114349228	chr9	-	22049	22106	True	NM_182905,NM_203447	chr9,chr9	-,+	WASH1,DOCK8	7690,192758
chr19:48828523-48829039	chr19	+	48828566	48828996	True	NM_144577,NM_001425	chr19,chr19	-,+	CCDC114,EMP3	-5234,12
chrX:70280882-70281450	chrX	+	70280898	70281297	True	NM_001170931,NM_013346	chrX,chrX	+,-	FOXO4,SNX12	34701,6984
chr12:57497645-57498109	chr12	+	57497731	57498067	True	NM_003153,NR_033659,NM_001178078,NM_005967,NM_001178079,NM_001178081,NM_001178080	chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,-,-,+,-,-,-	STAT6,STAT6,STAT6,NAB2,STAT6,STAT6,STAT6	7179,7179,7179,-15113,6072,7179,7179
chr15:25072868-25073616	chr15	+	25073132	25073580	True	NM_022807,NM_022806,NM_130838,NM_022808	chr15,chr15,chr15,chr15	+,+,-,+	SNRPN,SNRPN,UBE3A,SNRPN	-4397,-4397,577123,-4397
chr19:4403029-4403257	chr19	+	4403114	4403300	True	NM_001199943,NM_003025,NM_001199944,NM_005483	chr19,chr19,chr19,chr19	-,-,-,+	SH3GL1,SH3GL1,SH3GL1,CHAF1A	-2549,-2549,-2699,-505
chr14:105544119-105545475	chr14	+	105544339	105544923	True	NM_174891,NM_013345	chr14,chr14	+,-	C14orf79,GPR132	-91774,-12585
chr8:49982416-49983936	chr8	+	49982863	49983926	True	NM_003068,NM_001007176	chr8,chr8	-,+	SNAI2,C8orf22	-148864,976
chr1:15928581-15929003	chr1	+	15928923	15929052	True	NM_032341,NM_024758	chr1,chr1	+,-	DDI2,AGMAT	14900,-17318
chrX:140085147-140085598	chrX	+	140085488	140085642	True	NM_032461,NR_031725,NM_145664,NM_139019	chrX,chrX,chrX,chrX	+,-,+,+	SPANXB1,MIR320D2,SPANXB2,SPANXF1	-783,-77104,-783,-783
chrX:140085147-140085598	chrX	-	140672034	140672092	False	NM_013453,NM_145662	chrX,chrX	-,-	SPANXA1,SPANXA2	794,818
chrX:140085147-140085598	chrX	+	140678602	140678660	False	NM_013453,NM_145662	chrX,chrX	+,+	SPANXA1,SPANXA2	-794,-818
chrX:140085147-140085598	chrX	-	140335824	140335892	False	NM_022661,NM_145664	chrX,chrX	-,+	SPANXC,SPANXB2	804,-239114
chrX:140085147-140085598	chrX	+	140097493	140097647	False	NM_032461,NR_031725,NM_145664,NM_139019	chrX,chrX,chrX,chrX	+,-,+,+	SPANXB1,MIR320D2,SPANXB2,SPANXF1	-783,-89109,-783,-783
chr16:69599819-69600110	chr16	+	69599893	69600080	True	NM_173214,NR_031719,NM_001113178,NM_006599,NM_138714,NM_138713	chr16,chr16,chr16,chr16,chr16,chr16	+,-,+,+,+,+	NFAT5,MIR1538,NFAT5,NFAT5,NFAT5,NFAT5	-947,-122,-947,-947,-947,-947
chr1:54484159-54484534	chr1	+	54484183	54484571	True	NM_001010978,NM_153035	chr1,chr1	-,+	LDLRAD1,TCEANC2	-380,34702
chr10:29182743-29184683	chr10	+	29183098	29184237	True	NR_033805,NM_012342	chr10,chr10	-,+	LOC220906,BAMBI	-361815,-216726
chr20:30072397-30072996	chr20	+	30072521	30072882	True	NR_024358,NM_001037500,NM_014012	chr20,chr20,chr20	+,-,+	NCRNA00028,DEFB124,REM1	698,-11705,-9467
chr2:99757873-99758279	chr2	+	99757915	99758303	True	NM_182911,NM_144706	chr2,chr2	-,+	TSGA10,C2orf15	4,37
chr9:139876252-139876453	chr9	+	139876263	139876325	True	NM_000954,NM_004669,NM_207510	chr9,chr9,chr9	+,-,+	PTGDS,CLIC3,LCNL1	-4358,14749,1119
chr5:95011406-95011819	chr5	+	95011405	95011482	True	NM_031952,NM_173362	chr5,chr5	-,+	SPATA9,RFESD	7299,-28882
chr5:97549665-97550617	chr5	+	97549763	97550550	True	NM_001012761,NR_033932	chr5,chr5	+,-	RGMB,FLJ35946	554448,558288
chr12:117350561-117352324	chr12	+	117350674	117351765	True	NM_012174,NM_003806,NM_153348	chr12,chr12,chr12	+,-,+	FBXW8,HRK,FBXW8	-1967,-31442,-1967
chr8:70851346-70853129	chr8	+	70851802	70852438	True	NM_001128206,NM_030958	chr8,chr8	+,-	SULF1,SLCO5A1	-446825,-104503
chr4:187181500-187182565	chr4	+	187181536	187182596	True	NM_000128,NR_033900	chr4,chr4	+,-	F11,LOC285441	4521,239666
chr6:34185868-34187013	chr6	+	34186210	34186953	True	NM_002131,NM_001008703	chr6,chr6	+,-	HMGA1,C6orf1	17623,30008
chr3:9934481-9936298	chr3	+	9934612	9936129	True	NM_153483,NM_153480,NM_001199552,NM_001193380,NM_032492	chr3,chr3,chr3,chr3,chr3	+,+,-,+,+	IL17RE,IL17RE,CIDEC,IL17RE,JAGN1	8166,8382,-12674,8382,-2392
chr19:6740414-6740671	chr19	+	6740443	6740701	True	NM_004240,NM_001080452	chr19,chr19	+,-	TRIP10,GPR108	-787,-2810
chr17:28903793-28904813	chr17	+	28903904	28904352	True	NM_206832,NR_015341	chr17,chr17	-,+	TMIGD1,LRRC37BP1	-242839,-472
chr17:40975565-40975948	chr17	+	40975567	40975895	True	NM_176863,NM_003766,NM_005789	chr17,chr17,chr17	+,-,+	PSME3,BECN1,PSME3	9527,465,9527
chr19:36396709-36398155	chr19	+	36396886	36398161	True	NM_001007469,NM_003332,NM_001173514,NM_001173515,NR_033390,NM_198125,NM_139239,NM_014266	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,-,-,-,-,-,+	HCST,TYROBP,TYROBP,TYROBP,TYROBP,TYROBP,NFKBID,HCST	-3556,1100,1100,1100,1100,1100,-5334,-3556
chr1:153411015-153412270	chr1	+	153411082	153412266	True	NM_001045479,NM_176823	chr1,chr1	-,+	S100A7L2,S100A7A	287,-22133
chr1:11918418-11918765	chr1	+	11918488	11918792	True	NM_002521,NR_037806	chr1,chr1	-,+	NPPB,NPPA-AS1	250,-18163
chr15:90777596-90777887	chr15	+	90777654	90777926	True	NM_001013657,NM_006384	chr15,chr15	+,-	C15orf58,CIB1	-218,-375
chr1:40950771-40952687	chr1	+	40950849	40952544	True	NM_001852,NM_198494	chr1,chr1	-,+	COL9A2,ZNF642	-167910,-7602
chr17:45004971-45005355	chr17	+	45004976	45005334	True	NM_203400,NM_004287,NM_054022,NM_001012511	chr17,chr17,chr17,chr17	-,+,+,+	RPRML,GOSR2,GOSR2,GOSR2	51330,-4543,-4543,-4543
chr6:42988178-42989254	chr6	+	42988238	42989249	True	NM_057161,NM_033112,NM_014623	chr6,chr6,chr6	+,+,-	KLHDC3,RRP36,MEA1	-6312,135,-6620
chr5:33937798-33938114	chr5	+	33937802	33938092	True	NM_016568,NM_030955	chr5,chr5	+,-	RXFP3,ADAMTS12	-1362,-45678
chr9:35593215-35594681	chr9	+	35593379	35594702	True	NM_001782,NM_006285	chr9,chr9	-,+	CD72,TESK1	23772,10578
chr17:74464951-74465300	chr17	+	74464950	74465336	True	NM_022066,NM_001088	chr17,chr17	-,+	UBE2O,AANAT	-15662,-1371
chr4:47910894-47911921	chr4	+	47911075	47911447	True	NM_152995,NM_207330	chr4,chr4	-,+	NFXL1,NIPAL1	5236,107343
chr22:22851755-22853665	chr22	+	22851764	22853045	True	NR_027426,NM_080764	chr22,chr22	+,-	LOC648691,ZNF280B	48710,10518
chr21:39630336-39631398	chr21	+	39630487	39631327	True	NM_002243,NM_005867,NM_170736	chr21,chr21,chr21	+,-,+	KCNJ15,DSCR4,KCNJ15	-1875,-137033,-1669
chr16:84650180-84650487	chr16	+	84650183	84650438	True	NM_024731,NM_021149	chr16,chr16	+,-	KLHL36,COTL1	31692,1282
chr6:119470676-119471993	chr6	+	119470837	119472041	True	NM_001100411,NM_014034	chr6,chr6	-,+	FAM184A,ASF1A	-479,-255647
chr7:16394998-16396142	chr7	+	16394999	16396165	True	NM_001195280,NM_001101417	chr7,chr7	+,-	LOC100506049,ISPD	170339,64832
chr3:23844173-23844641	chr3	+	23844200	23844692	True	NM_003341,NM_182666,NM_020345,NM_001202476	chr3,chr3,chr3,chr3	+,+,-,+	UBE2E1,UBE2E1,NKIRAS1,UBE2E1	2691,2691,113897,7241
chrX:72346972-72347316	chrX	+	72347194	72347354	True	NR_027291,NM_001042506	chrX,chrX	-,+	NAP1L6,PABPC1L2B	615,-123893
chr5:756777-757387	chr5	+	756996	757420	True	NM_001166260,NM_007030	chr5,chr5	+,-	TRIP13,TPPP	135548,-63486
chr12:7902369-7902875	chr12	+	7902847	7902923	True	NM_203503,NM_001145465,NM_130441	chr12,chr12,chr12	-,+,-	CLEC4C,NANOGNB,CLEC4C	-778,14888,-778
chr8:108455775-108457117	chr8	+	108456303	108457085	True	NM_001198535,NM_001146	chr8,chr8	+,-	OXR1,ANGPT1	-718019,53219
chr17:62008921-62009145	chr17	+	62008946	62009163	True	NM_001164257,NM_001039933,NM_000626,NM_021602	chr17,chr17,chr17,chr17	+,-,-,-	C17orf72,CD79B,CD79B,CD79B	66547,591,591,591
chr6:66325681-66326400	chr6	+	66325892	66326330	True	NR_026540,NM_198283	chr6,chr6	+,-	MCART3P,EYS	171441,-36195
chr18:77628601-77629147	chr18	+	77628644	77628960	True	NM_012283,NM_001146343	chr18,chr18	+,-	KCNG2,PQLC1	-5029,82743
chr11:20409894-20410145	chr11	+	20409970	20410169	True	NM_001029865,NM_005788,NM_001145166,NM_001145167	chr11,chr11,chr11,chr11	-,+,+,+	DBX1,PRMT3,PRMT3,PRMT3	-228100,-945,-945,-945
chr1:23342690-23343880	chr1	+	23342713	23343580	True	NM_001142546,NM_015013,NM_001009999	chr1,chr1,chr1	-,+,+	LUZP1,KDM1A,KDM1A	151821,2360,2360
chr9:35656771-35657061	chr9	+	35656796	35657001	True	NM_032818,NM_014450,NM_001195201,NM_001195200,NR_003051,NM_001195217,NM_174923	chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,-,+,+,-,+,+	C9orf100,SIT1,CCDC107,CCDC107,RMRP,CCDC107,CCDC107	8328,-5849,1285,1285,1065,1285,1285
chr9:19230031-19230344	chr9	+	19230038	19230166	True	NR_038064,NM_017925	chr9,chr9	-,+	PLIN2,DENND4C	-102434,60582
chr21:46238935-46239475	chr21	+	46239064	46239482	True	NM_058190,NM_006936	chr21,chr21	+,-	C21orf70,SUMO3	120472,-1020
chr5:26990670-26991267	chr5	+	26990714	26991295	True	NR_033961,NM_016279	chr5,chr5	+,-	LOC729862,CDH9	1935681,47451
chr19:51072906-51073142	chr19	+	51072990	51073154	True	NR_004384,NM_001080457	chr19,chr19	+,-	SNAR-F,LRRC4B	35065,-1688
chr20:58586089-58586760	chr20	+	58586092	58586749	True	NM_021810,NM_006242	chr20,chr20	+,-	CDH26,PPP1R3D	-14726,-70740
chr19:54783030-54784664	chr19	+	54783222	54784686	True	NM_001013,NM_005874,NM_001080978	chr19,chr19,chr19	+,-,-	RPS9,LILRB2,LILRB2	-78547,397,397
chrX:100600600-100602536	chrX	+	100600867	100602582	True	NM_001145951,NM_021029,NM_004085	chrX,chrX,chrX	-,+,-	TIMM8A,RPL36A,TIMM8A	1176,43295,1425
chr15:34636344-34636938	chr15	+	34636762	34636891	True	NM_133647,NM_018648,NM_001042497,NM_175741,NM_001042495,NM_001042496,NM_001042494	chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,-,+,-,-,-	SLC12A6,NOP10,SLC12A6,C15orf55,SLC12A6,SLC12A6,SLC12A6	-7717,-1400,-7717,1174,-6497,-6801,-6801
chr5:39073293-39073609	chr5	+	39073299	39073486	True	NM_003999,NM_152756	chr5,chr5	+,-	OSMR,RICTOR	-227249,1072
chrX:54209966-54210532	chrX	+	54209971	54210419	True	NM_198456,NM_058163,NM_017848	chrX,chrX,chrX	-,+,-	FAM120C,TSR2,FAM120C	-257,256433,-257
chr13:99294384-99295243	chr13	+	99294559	99295040	True	NM_001032296,NR_036129	chr13,chr13	-,+	STK24,MIR3170	-65163,-433843
chr22:29973696-29975102	chr22	+	29974597	29975059	True	NM_181825,NM_001202502,NM_003634	chr22,chr22,chr22	+,-,-	NF2,NIPSNAP1,NIPSNAP1	24485,2076,2317
chr8:104388037-104388752	chr8	+	104388115	104388796	True	NM_138455,NM_030780	chr8,chr8	+,-	CTHRC1,SLC25A32	-4380,38731
chr12:42735074-42735514	chr12	+	42735141	42735400	True	NM_016488,NM_033114	chr12,chr12	+,-	PPHLN1,ZCRB1	-15253,-15209
chr1:46572913-46574685	chr1	+	46573048	46574378	True	NM_003629,NM_005727	chr1,chr1	-,+	PIK3R3,TSPAN1	24060,66370
chr18:12253374-12253857	chr18	+	12253402	12253742	True	NR_036468,NM_006796,NM_001279	chr18,chr18,chr18	+,-,+	CIDEA,AFG3L2,CIDEA	617,123583,575
chr2:105650705-105652651	chr2	+	105651288	105652466	True	NR_037883,NM_182640	chr2,chr2	-,+	LOC100506421,MRPS9	-183354,2016
chr17:27222574-27223824	chr17	+	27222574	27223859	True	NM_144683,NM_005702,NM_004475	chr17,chr17,chr17	-,+,-	DHRS13,ERAL1,FLOT2	6280,-40585,906
chr7:131373286-131375167	chr7	+	131373517	131374819	True	NM_005397,NM_013255	chr7,chr7	-,+	PODXL,MKLN1	-132141,-360973
chr17:44337580-44337819	chr17_ctg5_hap1	-	528222	528272	False	NM_001193465,NR_034172	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	KIAA1267,LOC644246	35225,67164
chr17:44337580-44337819	chr17_ctg5_hap1	+	1204658	1204708	False	NR_026901,NR_037772	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LOC644172,CRHR1	-16270,-34205
chr17:44337580-44337819	chr17_ctg5_hap1	+	1424038	1424342	False	NR_002940,NM_016632	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LRRC37A4,ARL17A	57034,89593
chr17:44337580-44337819	chr17	+	44337669	44337813	True	NM_001193465,NM_014834	chr17,chr17	-,+	KIAA1267,LRRC37A	-34929,34683
chr17:44337580-44337819	chr17	-	43663407	43663551	False	NR_026901,NR_037772	chr17,chr17	-,+	LOC644172,CRHR1	16247,34158
chr2:169312889-169313333	chr2	+	169312948	169313144	True	NM_203463,NM_013233	chr2,chr2	+,-	LASS6,STK39	-164,-208843
chr7:87317530-87319411	chr7	+	87318063	87319161	True	NM_138290,NM_000927	chr7,chr7	+,-	RUNDC3B,ABCB1	-60397,23535
chr5:140761555-140762054	chr5	+	140761708	140762097	True	NM_032086,NM_032087,NM_003736,NM_032098,NM_032088,NM_018919,NM_005642,NM_014004,NM_018920	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,-,+,+	PCDHGA6,PCDHGA7,PCDHGB4,PCDHGB4,PCDHGA8,PCDHGA6,TAF7,PCDHGA8,PCDHGA7	-8111,369,5354,5354,9385,-8111,-61357,9385,369
chr6:153311173-153311673	chr6	+	153311325	153311647	True	NM_194435,NM_012177,NM_001142522	chr6,chr6,chr6	+,-,-	VIP,FBXO5,FBXO5	-239453,-7122,-6585
chr3:186857656-186858854	chr3	+	186857705	186858436	True	NM_052969,NM_153708	chr3,chr3	-,+	RPL39L,RTP1	-442,56837
chr1:201915723-201915963	chr1	+	201915787	201915937	True	NM_006335,NM_012134	chr1,chr1	+,-	TIMM17A,LMOD1	8681,-71
chr7:6690109-6690700	chr7	+	6690153	6690629	True	NM_017560,NM_006956	chr7,chr7	+,-	ZNF853,ZNF12	-34677,55987
chr8:103136141-103136388	chr8	+	103136168	103136338	True	NM_001040630,NM_001040627,NM_001040626,NM_001040625,NM_001040624,NM_001040629,NM_001040628,NM_024410	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,-,-,-,+	NCALD,NCALD,NCALD,NCALD,NCALD,NCALD,NCALD,ODF1	847,274,274,274,274,274,274,427509
chr16:85936728-85938545	chr16	+	85936731	85938535	True	NM_002163,NM_006067	chr16,chr16	+,-	IRF8,COX4NB	-4008,-103583
chr1:184701164-184702005	chr1	+	184701964	184702036	True	NM_025191,NM_007212	chr1,chr1	-,+	EDEM3,RNF2	22055,312514
chr7:32059382-32059704	chr7	+	32059395	32059693	True	NM_001191057,NM_006658	chr7,chr7	-,+	PDE1C,C7orf16	50823,-332815
chrX:100104284-100105919	chrX	+	100104288	100105770	True	NM_001325,NM_007052	chrX,chrX	+,-	CSTF2,NOX1	-28992,23614
chr4:184427614-184428344	chr4	+	184427618	184428195	True	NR_033995,NM_001564	chr4,chr4	-,+	LOC389247,ING2	-1950,-1449
chr9:4489711-4490083	chr9	+	4489764	4490104	True	NM_001039395,NM_004170	chr9,chr9	-,+	C9orf68,SLC1A1	176620,322
chr4:170186406-170186783	chr4	+	170186405	170186628	True	NM_020870,NM_001829	chr4,chr4	-,+	SH3RF1,CLCN3	5680,355093
chr19:53718723-53719061	chr19	+	53718725	53718933	True	NM_024733,NM_173856	chr19,chr19	-,+	ZNF665,VN1R2	-22106,42611
chr2:242810431-242810848	chr2	+	242810508	242810784	True	NM_173821	chr2	+	C2orf85	1101
chr2:155555439-155555925	chr2	+	155555443	155555937	True	NM_019845,NM_002239	chr2,chr2	-,+	RPRM,KCNJ3	-1220121,-401
chr16:474265-474689	chr16	+	474310	474675	True	NM_014700,NM_021259	chr16,chr16	+,-	RAB11FIP3,TMEM8A	992,-42360
chrX:41545433-41547065	chrX	+	41545933	41546685	True	NM_005300,NM_001126054,NM_001097579	chrX,chrX,chrX	+,-,+	GPR34,CASK,GPR34	1540,235652,1540
chr1:79214353-79214845	chr1	+	79214435	79214893	True	NM_022159,NM_006417	chr1,chr1	-,+	ELTD1,IFI44	257652,-99013
chr12:49731766-49732995	chr12	+	49731813	49732681	True	NM_001008223,NM_024902	chr12,chr12	-,+	C1QL4,DNAJC22	-842,8359
chr12:54361367-54361943	chr12	+	54361385	54361953	True	NM_014212,NR_003716	chr12,chr12	+,-	HOXC11,HOTAIR	4956,612
chr7:129097888-129098479	chr7	+	129097919	129098495	True	NM_020704,NR_029614	chr7,chr7	+,-	FAM40B,MIR182	-23696,311887
chr19:12809586-12809951	chr19	+	12809708	12809952	True	NM_032301,NR_002751,NM_032332	chr19,chr19,chr19	-,-,+	FBXW9,SNORD41,WDR83	-2253,7438,-29242
chr6:43320178-43321070	chr6	+	43320281	43320874	True	NM_014345,NM_153320	chr6,chr6	-,+	ZNF318,SLC22A7	16368,-54336
chr1:23038667-23039165	chr1	+	23038671	23039070	True	NR_036214,NM_017449,NM_004442	chr1,chr1,chr1	-,+,+	MIR4253,EPHB2,EPHB2	150700,-1391,-1391
chr19:6768110-6768378	chr19	+	6768265	6768357	True	NM_005490,NM_005428	chr19,chr19	-,+	SH2D3A,VAV1	-742,4364
chr14:77600373-77601263	chr14	+	77600389	77601287	True	NM_174976,NM_033426	chr14,chr14	-,+	ZDHHC22,KIAA1737	6897,-35862
chr19:51982987-51983499	chr19	+	51983008	51983516	True	NM_033329,NM_001080405	chr19,chr19	-,+	SIGLEC12,CEACAM18	20181,-3221
chr5:112312655-112312905	chr5	+	112312770	112312844	True	NM_005669,NM_152624	chr5,chr5	-,+	REEP5,DCP2	-54739,-388
chr1:55195155-55195691	chr1	+	55195166	55195402	True	NM_004623,NM_152268	chr1,chr1	+,-	TTC4,PARS2	-13724,34882
chr19:41036392-41036622	chr19	+	41036416	41036504	True	NM_025213,NM_000713	chr19,chr19	+,-	SPTBN4,BLVRB	-72,-64691
chr11:118242824-118243032	chr11	+	118242973	118243088	True	NM_004788,NM_001040651	chr11,chr11	+,-	UBE4A,CD3D	-12739,-29514
chr1:55107289-55108380	chr1	+	55107555	55108218	True	NR_026782,NR_037639,NM_001039464,NR_037640,NR_037641,NM_176782	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-	HEATR8,HEATR8-TTC4,HEATR8,HEATR8-TTC4,HEATR8-TTC4,FAM151A	-186,-186,-186,-186,-186,-18355
chr6:6621218-6623141	chr6	+	6621457	6623154	True	NM_004271,NR_026970	chr6,chr6	+,-	LY86,LY86-AS1	-32574,-38
chr17:4937563-4938056	chr17	+	4937661	4938103	True	NM_006612,NM_001104577,NM_017986	chr17,chr17,chr17	+,-,-	KIF1C,GPR172B,GPR172B	-36469,674,674
chr10:111988028-111989965	chr10	+	111988356	111990019	True	NM_005962,NM_005871	chr10,chr10	+,-	MXI1,SMNDC1	-2646,74746
chr19:55998625-55998974	chr19	+	55998716	55998962	True	NM_024710,NM_001144950,NM_020378,NM_001195267	chr19,chr19,chr19,chr19	-,+,+,+	ISOC2,SSC5D,NAT14,SSC5D	-25667,907,-2210,907
chr3:184031570-184031840	chr3	+	184031569	184031747	True	NM_004953,NM_001194947,NM_198242,NM_198241,NM_001194946,NM_198244,NM_001171087,NM_182917	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,+,+,-,+	EIF4G1,EIF4G1,EIF4G1,EIF4G1,EIF4G1,EIF4G1,CLCN2,EIF4G1	6353,535,535,535,535,535,47702,1204
chr8:54749469-54750073	chr8	+	54749786	54749999	True	NM_015941,NM_170587,NM_213620,NM_213619	chr8,chr8,chr8,chr8	-,+,-,-	ATP6V1H,RGS20,ATP6V1H,ATP6V1H	5908,14368,5605,5908
chr1:113217179-113217554	chr1	+	113217317	113217593	True	NM_001130079,NM_020963,NM_001042679	chr1,chr1,chr1	+,+,-	MOV10,MOV10,RHOC	-320,-320,32135
chr4:76484064-76484375	chr4	+	76484226	76484424	True	NR_037914,NM_178497	chr4,chr4	-,+	RCHY1,C4orf26	-44586,-3031
chr3:194992364-194993230	chr3	+	194992509	194993106	True	NR_003265,NM_152531	chr3,chr3	+,-	SDHAP2,C3orf21	391803,-614
chr14:23306185-23306507	chr14	+	23306202	23306553	True	NM_004995,NM_181304,NM_181305,NM_181306,NM_181307,NM_180982,NM_001126106,NM_178336	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,+,+,+,-,+	MMP14,MRPL52,MRPL52,MRPL52,MRPL52,MRPL52,SLC7A7,MRPL52	-460,-7161,-7161,-7161,-7161,-7161,-17188,-7161
chr1:16061905-16062747	chr1	+	16061997	16062651	True	NM_001089591,NM_001013641,NM_207348	chr1,chr1,chr1	-,+,+	UQCRHL,TMEM82,SLC25A34	71593,6265,157
chr7:121002024-121002257	chr7	+	121002024	121002246	True	NM_057168,NM_001040020	chr7,chr7	+,-	WNT16,FAM3C	-32996,34228
chr5:69344707-69345413	chr5	+	69345334	69345412	True	NM_022876,NM_022877,NM_022874,NM_022875,NM_000344,NM_017411,NR_024054	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,-	SMN2,SMN2,SMN1,SMN2,SMN1,SMN2,LOC100170939	-36,-36,-36,-36,-36,-36,176260
chr5:69344707-69345413	chr5	+	70220752	70220830	False	NM_022876,NM_022877,NM_022874,NM_022875,NM_000344,NM_017411,NM_004536	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,-	SMN2,SMN2,SMN1,SMN2,SMN1,SMN2,NAIP	-36,-36,-36,-36,-36,-36,100161
chr22:36878258-36878465	chr22	+	36878263	36878382	True	NM_012473,NM_145343	chr22,chr22	-,+	TXN2,APOL1	-576,-229197
chr11:67091687-67093592	chr11	+	67091723	67092176	True	NM_021173,NR_024469	chr11,chr11	-,+	POLD4,LOC100130987	28935,-6464
chr12:70760593-70761021	chr12	+	70760608	70761010	True	NM_002837,NM_014505	chr12,chr12	-,+	PTPRB,KCNMB4	242664,-597
chr4:1904885-1905552	chr4	+	1904938	1905370	True	NM_012318,NM_133334	chr4,chr4	-,+	LETM1,WHSC1	-46964,-2637
chr20:32255072-32255337	chr20	+	32255197	32255365	True	NM_080825,NM_031231,NM_031232,NM_001024675	chr20,chr20,chr20,chr20	+,-,-,+	C20orf144,NECAB3,NECAB3,C20orf134	-5156,6949,6949,-944
chr7:54610114-54611288	chr7	+	54610223	54611213	True	NM_182546,NM_001012456	chr7,chr7	+,-	VSTM2A,SEC61G	-255,215780
chr1:221509982-221511693	chr1	+	221510018	221511378	True	NM_021958,NR_024236	chr1,chr1	+,-	HLX,LOC400804	-457327,-380
chr2:240982882-240984685	chr2	+	240983002	240984698	True	NM_173351,NR_037808,NM_001080835	chr2,chr2,chr2	-,+,-	OR6B3,LOC150935,PRR21	842,-298499,-603
chr3:183771842-183773423	chr3	+	183771892	183773166	True	NM_001023587,NM_130770	chr3,chr3	-,+	ABCC5,HTR3C	-36165,-1109
chr3:98474183-98474455	chr3	+	98474182	98474508	True	NM_006100,NM_080927	chr3,chr3	+,-	ST3GAL6,DCBLD2	-22669,146081
chr1:203098307-203099289	chr1	+	203098326	203099012	True	NM_001048230,NM_000674,NM_002479	chr1,chr1,chr1	+,+,-	ADORA1,ADORA1,MYOG	-1541,-1541,-42949
chr8:125950076-125951122	chr8	+	125950306	125951161	True	NR_027321,NM_014846	chr8,chr8	+,-	LOC157381,KIAA0196	3088,152951
chr15:75197079-75197282	chr15	+	75197104	75197282	True	NM_002435,NM_020447	chr15,chr15	+,-	MPI,C15orf17	-14745,2230
chr13:37247134-37247505	chr13	+	37247174	37247552	True	NM_001127217,NM_203451	chr13,chr13	-,+	SMAD9,C13orf36	246907,496
chr4:166307420-166308682	chr4	+	166307422	166308399	True	NR_030304,NR_026575,NM_001873	chr4,chr4,chr4	+,-,+	MIR578,GK3P,CPE	-89,-106247,-7386
chr19:8210778-8211177	chr19	+	8210925	8211219	True	NM_024552,NM_032447	chr19,chr19	+,-	LASS4,FBN3	62997,1216
chr5:72153067-72154518	chr5	+	72153200	72154257	True	NM_153188,NM_152625	chr5,chr5	+,-	TNPO1,ZNF366	-9328,-349951
chr1:246726284-246728140	chr1	+	246726918	246727963	True	NM_152609,NM_001139459,NM_022366	chr1,chr1,chr1	+,+,-	CNST,CNST,TFB2M	1675,1675,1659
chr11:119077486-119077730	chr11	+	119077650	119077710	True	NM_001145018,NM_005188	chr11,chr11	-,+	CCDC153,CBL	-11066,-711
chr10:38383398-38383611	chr10	+	38383509	38383651	True	NM_003421,NM_001007094,NM_145011,NM_001178101	chr10,chr10,chr10,chr10	+,+,-,+	ZNF37A,ZNF37A,ZNF25,ZNF37A	-296,-296,-118056,-296
chr20:48184825-48185527	chr20	+	48185237	48185527	True	NM_015266,NM_000961	chr20,chr20	+,-	SLC9A8,PTGIS	243722,-530
chr16:23726728-23728162	chr16	+	23726931	23728118	True	NM_005030,NM_022097,NM_033266	chr16,chr16,chr16	+,+,-	PLK1,CHP2,ERN2	-36789,37829,-2110
chr11:123524809-123525048	chr11	+	123524834	123524910	True	NM_020716,NM_001040151,NM_018400	chr11,chr11,chr11	+,-,-	GRAMD1B,SCN3B,SCN3B	-128357,455,455
chr8:7923993-7924516	chr8	+	7924104	7924322	True	NR_031689,NR_027424	chr8,chr8	-,+	MIR548I3,FAM66E	22339,-111620
chr8:7923993-7924516	chr8	-	12457561	12457738	False	NR_037492,NR_037495	chr8,chr8	-,+	MIR3926-1,MIR3926-2	127252,127007
chr8:7923993-7924516	chr8	-	7537011	7537063	False	NM_001136572,NM_001164452	chr8,chr8	-,+	FAM90A7,FAM90A14	-96836,35901
chr8:7923993-7924516	chr8	-	7078249	7078305	False	NR_027000,NM_001164452	chr8,chr8	-,+	LOC349196,FAM90A14	42759,36120
chr1:248616171-248616799	chr1	+	248616197	248616701	True	NM_001004694,NM_001004136	chr1,chr1	-,+	OR2T29,OR2T2	106123,-149
chr1:248616171-248616799	chr1	-	248801959	248802460	False	NM_001001827,NM_001013355	chr1,chr1	-,+	OR2T35,OR2G6	149,-117062
chrX:52896718-52896964	chrX	+	52896718	52896958	True	NM_133179,NM_014138,NM_130776	chrX,chrX,chrX	-,+,-	XAGE3,FAM156A,XAGE3	211,30903,-386
chr7:44180649-44181349	chr7	+	44180951	44181217	True	NM_021223,NM_001129	chr7,chr7	-,+	MYL7,AEBP1	-35,-37042
chr15:42697803-42699283	chr15	+	42697835	42699172	True	NM_022473,NM_173090,NM_173088,NM_173089	chr15,chr15,chr15,chr15	-,+,+,+	ZFP106,CAPN3,CAPN3,CAPN3	50608,-917,-3306,-917
chr19:36390930-36391432	chr19	+	36391204	36391286	True	NM_001007469,NM_003332,NM_001173514,NM_001173515,NR_033390,NM_198125,NM_139239,NM_014266	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,-,-,-,-,-,+	HCST,TYROBP,TYROBP,TYROBP,TYROBP,TYROBP,NFKBID,HCST	2095,7975,7975,7975,7975,7975,316,2095
chr21:45933166-45933489	chr21	+	45933253	45933505	True	NR_026548,NR_026547,NM_198691	chr21,chr21,chr21	+,+,-	C21orf90,C21orf90,KRTAP10-1	3592,3592,26623
chr13:51633008-51634876	chr13	+	51633031	51634827	True	NR_003923,NM_001142279	chr13,chr13	-,+	GUCY1B2,RNASEH2B	5516,-149268
chr4:140479751-140481376	chr4	+	140480022	140481370	True	NM_031296,NM_030648,NM_001204368	chr4,chr4,chr4	+,-,+	RAB33B,SETD7,MGST2	-105119,-2445,105551
chr2:45237959-45238305	chr2	+	45238083	45238343	True	NM_005413,NM_016932	chr2,chr2	+,-	SIX3,SIX2	-69097,-1541
chr11:76779468-76780591	chr11	+	76779613	76780633	True	NM_182833,NM_004055	chr11,chr11	-,+	GDPD4,CAPN5	217880,-1672
chrX:131162569-131162829	chrX	+	131162584	131162871	True	NM_001042452,NM_001042453,NM_194277,NM_016542	chrX,chrX,chrX,chrX	+,+,-,+	MST4,MST4,FRMD7,MST4	-5007,-5398,99230,-5398
chr5:161118599-161118989	chr5	+	161118636	161119023	True	NM_000811,NM_021911	chr5,chr5	+,-	GABRA6,GABRB2	-6032,-143506
chr17:2237829-2238600	chr17	+	2237858	2238582	True	NR_003072,NR_003073,NM_014853,NM_018128,NM_001098509	chr17,chr17,chr17,chr17,chr17	-,-,+,-,+	SNORD91A,SNORD91B,SGSM2,TSR1,SGSM2	-4194,-5354,2223,2146,2225
chr3:15671876-15672416	chr3	+	15672106	15672376	True	NM_000060,NM_012260	chr3,chr3	+,-	BTD,HACL1	-28902,-28976
chr2:229044311-229044546	chr2	+	229044342	229044601	True	NM_178821,NM_001142644,NM_030623	chr2,chr2,chr2	+,-,-	WDR69,SPHKAP,SPHKAP	-308075,1821,1821
chr7:25216479-25218374	chr7	+	25216490	25218327	True	NM_138811,NM_016447	chr7,chr7	-,+	C7orf31,MPP6	1548,-603456
chr16:74452758-74453248	chr16	+	74453054	74453146	True	NM_001011880,NM_002811	chr16,chr16	-,+	CLEC18B,PSMD7	2272,-122432
chr16:74452758-74453248	chr16	-	69987297	69987373	False	NM_001136214,NR_003610,NM_182619	chr16,chr16,chr16	+,-,+	CLEC18A,PDXDC2P,CLEC18A	-2722,112528,-2538
chr16:74452758-74453248	chr16	-	70210209	70210285	False	NR_033959,NM_173619	chr16,chr16	-,+	LOC729513,CLEC18C	49701,-2332
chr3:113460106-113461951	chr3	+	113460146	113461810	True	NM_001690,NM_025146	chr3,chr3	+,-	ATP6V1A,NAA50	4055,3360
chr10:105210359-105210996	chr10	+	105210410	105211012	True	NR_024552,NM_015916,NM_004210,NM_001001412	chr10,chr10,chr10,chr10	-,-,+,-	CALHM2,CALHM2,NEURL,CALHM1	1200,1200,42722,7686
chr11:83367339-83368672	chr11	+	83367707	83368371	True	NM_182603,NM_001142702	chr11,chr11	+,-	ANKRD42,DLG2	-462467,25147
chr6:3044449-3045398	chr6	+	3044640	3045215	True	NR_033884,NM_003804	chr6,chr6	-,+	LOC401233,RIPK1	-19635,31842
chr16:3029190-3029773	chr16	+	3029441	3029687	True	NR_033861,NM_004203,NM_182687	chr16,chr16,chr16	+,-,-	LOC283875,PKMYT1,PKMYT1	9367,903,903
chr2:128152321-128153483	chr2	+	128152325	128152955	True	NM_000312,NM_006609	chr2,chr2	+,-	PROC,MAP3K2	23040,-51555
chr19:38209414-38209813	chr19	+	38209429	38209851	True	NM_001172226,NM_001172677,NM_032689	chr19,chr19,chr19	+,-,-	ZNF540,ZNF607,ZNF607	-123749,288,890
chr5:96510524-96512204	chr5	+	96510826	96511791	True	NM_001159749,NM_018343,NM_175920	chr5,chr5,chr5	-,-,+	RIOK2,RIOK2,LNPEP	7267,7267,-216722
chr11:18802957-18803516	chr11	+	18803319	18803565	True	NM_153347,NM_001039970,NM_032781,NM_006906	chr11,chr11,chr11,chr11	+,-,-,-	TMEM86A,PTPN5,PTPN5,PTPN5	-83019,9874,9874,9874
chr10:91095354-91096120	chr10	+	91095353	91096141	True	NM_001549,NM_000235,NM_001031683	chr10,chr10,chr10	+,-,+	IFIT3,LIPA,IFIT3	-7803,-83693,-3166
chr11:88044310-88045624	chr11	+	88044483	88045617	True	NM_000372,NM_001814	chr11,chr11	+,-	TYR,CTSC	865422,25374
chr22:35547117-35548206	chr22	+	35547195	35547836	True	NM_001008494,NM_005368	chr22,chr22	+,-	ISX,MB	-85116,465605
chr10:90699435-90700400	chr10	+	90699438	90700438	True	NM_001613,NM_000043	chr10,chr10	-,+	ACTA2,FAS	12192,49849
chr7:56172164-56172459	chr7	+	56172185	56172271	True	NM_015411,NM_016139	chr7,chr7	+,-	SUMF2,CHCHD2	-40320,1970
chr1:32537274-32538239	chr1	+	32537433	32538125	True	NM_018056,NM_080391	chr1,chr1	+,-	TMEM39B,PTP4A2	377,-133445
chr12:49450988-49452083	chr12	+	49451059	49452083	True	NM_003482,NM_005430	chr12,chr12	-,+	MLL2,WNT1	-1952,-78874
chr17:1394199-1394401	chr17	+	1394209	1394383	True	NM_001080779,NM_001080950,NR_028514,NM_033375	chr17,chr17,chr17,chr17	-,-,+,-	MYO1C,MYO1C,LOC100306951,MYO1C	1668,-5158,25829,639
chr11:100999921-101000162	chr11	+	101000047	101000201	True	NM_032021,NM_001202474,NM_000926	chr11,chr11,chr11	+,-,-	TMEM133,PGR,PGR	-137287,-253,393
chrX:131539631-131540597	chrX	+	131540059	131540579	True	NM_001042452,NM_001170701,NM_001170702,NM_001170703	chrX,chrX,chrX,chrX	+,-,-,-	MST4,MBNL3,MBNL3,MBNL3	-382474,7086,7086,7119
chr3:61196426-61196722	chr3	+	61196585	61196681	True	NM_002841,NM_001166243	chr3,chr3	+,-	PTPRG,FHIT	350561,40504
chr1:72748250-72748490	chr1	+	72748456	72748538	True	NM_153742,NM_173808	chr1,chr1	+,-	CTH,NEGR1	-1871606,-179
chr19:3573830-3574229	chr19	+	3573867	3574247	True	NM_174983,NM_006339	chr19,chr19	-,+	C19orf28,HMG20B	-16296,-975
chr3:15468691-15469002	chr3	+	15468789	15469021	True	NM_033083,NM_152396	chr3,chr3	+,-	EAF1,METTL6	42,71
chr15:101399190-101399390	chr15	+	101399195	101399365	True	NM_001040616,NM_000693	chr15,chr15	-,+	LINS,ALDH1A3	-256750,20643
chr5:125936602-125936803	chr5	+	125936634	125936752	True	NM_001201377,NM_032177,NM_001202404,NM_001182	chr5,chr5,chr5,chr5	-,+,-,-	ALDH7A1,PHAX,ALDH7A1,ALDH7A1	-5552,-78,-5552,-5552
chr9:127616342-127616563	chr9	+	127616341	127616581	True	NM_007209,NM_001045476	chr9,chr9	-,+	RPL35,WDR38	7709,-637
chr7:34871999-34873296	chr7	+	34872159	34873181	True	NR_015356,NM_207173	chr7,chr7	-,+	AAA1,NPSR1	814,-174325
chr4:25554487-25556278	chr4	+	25554537	25556265	True	NM_015187,NM_001177998	chr4,chr4	-,+	SEL1L3,SLC34A2	308395,101169
chr2:27722270-27722783	chr2	+	27722274	27722610	True	NM_022823,NM_015662,NM_001486	chr2,chr2,chr2	-,-,+	FNDC4,IFT172,GCKR	-4148,-9703,-2626
chr21:44554972-44555661	chr21	+	44554980	44555465	True	NM_006758,NM_000394	chr21,chr21	-,+	U2AF1,CRYAA	-27292,33675
chr6:39906842-39907501	chr6	+	39906848	39907376	True	NM_001075098,NR_033233,NM_015345	chr6,chr6,chr6	-,-,+	MOCS1,MOCS1,DAAM2	-4558,-4558,-146126
chrX:37208554-37208804	chrX	+	37208581	37208799	True	NM_001173489,NM_001173486,NM_001173490,NM_001142395,NM_000950,NM_006520	chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,-	PRRG1,PRRG1,PRRG1,PRRG1,PRRG1,DYNLT3	-49,-104,-49,-104,-104,498140
chr15:25438007-25438421	chr15	+	25438105	25438457	True	NR_003308,NR_003358,NR_003311,NR_003310,NM_130838,NR_003297,NR_003344,NR_003309,NR_003351,NR_003300,NR_003301,NR_003302,NR_003303,NR_003304,NR_003305,NR_003306	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,-,+,+,+,+,+,+,+,+,+,+,+	SNORD115-16,SNORD115-43,SNORD115-19,SNORD115-18,UBE3A,SNORD115-5,SNORD115-29,SNORD115-17,SNORD115-36,SNORD115-8,SNORD115-9,SNORD115-10,SNORD115-11,SNORD115-12,SNORD115-13,SNORD115-14	6137,-3595,8012,8012,212246,-1590,-3595,8012,-3595,-8703,-1593,-1593,-3595,-1593,10,1610
chr12:31800186-31800685	chr12	+	31800227	31800462	True	NM_001135864,NM_144973	chr12,chr12	+,-	METTL20,DENND5B	-184,-56275
chr13:38923170-38923625	chr13	+	38923209	38923599	True	NM_016179,NM_016617	chr13,chr13	-,+	TRPC4,UFM1	-479270,342
chr3:50607796-50608597	chr3	+	50607860	50608526	True	NM_016173,NM_001171743,NM_016210,NM_001171741,NM_001171740	chr3,chr3,chr3,chr3,chr3	+,-,-,-,-	HEMK1,C3orf18,C3orf18,C3orf18,C3orf18	-1016,-2637,-2637,-18,-2637
chr11:61128372-61128851	chr11	+	61128586	61128842	True	NM_001161452,NM_016464,NM_153611,NM_001161454,NR_028473	chr11,chr11,chr11,chr11,chr11	-,+,-,-,+	CYBASC3,TMEM138,CYBASC3,CYBASC3,TMEM138	-4225,630,963,963,630
chr19:15750055-15751078	chr19	+	15750208	15750766	True	NM_000896,NM_001199208,NM_001199209,NR_033864	chr19,chr19,chr19,chr19	+,+,+,-	CYP4F3,CYP4F3,CYP4F3,CYP4F24P	940,940,940,140082
chr22:39929030-39929473	chr22	+	39929031	39929362	True	NM_182810,NM_194326	chr22,chr22	+,-	ATF4,RPS19BP1	-12513,-171
chr13:38368641-38370379	chr13	+	38368746	38370433	True	NM_001135955,NM_016617	chr13,chr13	-,+	TRPC4,UFM1	73562,553508
chr14:90800419-90801251	chr14	+	90800443	90801017	True	NM_199043,NM_017970,NM_006888	chr14,chr14,chr14	-,-,+	C14orf102,C14orf102,CALM1	-2164,-2164,62309
chr20:1373945-1375699	chr20	+	1374004	1375075	True	NR_037661,NM_000801,NM_014723,NM_054014,NM_001199786	chr20,chr20,chr20,chr20,chr20	-,-,+,-,-	FKBP1A-SDCBP2,FKBP1A,SNPH,FKBP1A,FKBP1A	-188,-188,-127095,-188,-188
chr12:7050097-7050546	chr12	+	7050141	7050468	True	NM_138425,NM_080548,NM_080549,NR_003010,NM_002831	chr12,chr12,chr12,chr12,chr12	+,+,+,-,+	C12orf57,PTPN6,PTPN6,SCARNA12,PTPN6	2734,5271,9965,26356,9965
chr20:56287228-56287530	chr20	+	56287263	56287519	True	NM_020182,NM_199169,NM_002591,NM_199170,NM_199171	chr20,chr20,chr20,chr20,chr20	-,-,+,-,-	PMEPA1,PMEPA1,PCK1,PMEPA1,PMEPA1	-2232,-1638,-151177,-1638,-722
chr11:63608973-63609847	chr11	+	63609063	63609692	True	NM_001039469,NM_001163296,NM_004954,NM_001144936,NM_001163297	chr11,chr11,chr11,chr11,chr11	+,+,+,-,+	MARK2,MARK2,MARK2,C11orf95,MARK2	-2714,-2714,-2714,-72950,-2714
chr15:83481139-83483031	chr15	+	83481366	83482983	True	NM_001007122,NM_001080435	chr15,chr15	-,+	FSD2,WHAMM	-6560,-3448
chr20:36796778-36797941	chr20	+	36797074	36797962	True	NM_001725,NM_004613,NM_021215,NM_198951	chr20,chr20,chr20,chr20	+,-,+,-	BPI,TGM2,RPRD1B,TGM2	134589,-3374,-135184,-3374
chr8:11224270-11225599	chr8	+	11224333	11225619	True	NR_026814,NM_053279	chr8,chr8	+,-	C8orf12,FAM167A	291,98707
chr7:36406632-36406833	chr7	+	36406684	36406850	True	NM_015314,NM_018685,NM_001199708,NM_001199707,NM_001199706	chr7,chr7,chr7,chr7,chr7	-,+,-,-,-	KIAA0895,ANLN,KIAA0895,KIAA0895,KIAA0895	50,22581,78,-18,42
chr2:172967738-172969436	chr2	+	172967958	172968915	True	NM_178120,NM_004405	chr2,chr2	+,-	DLX1,DLX2	-17802,-480
chr17:66105133-66105956	chr17	+	66105439	66105663	True	NM_181656,NR_027418	chr17,chr17	-,+	C17orf58,LOC100499466	-115674,-7796
chr19:14596984-14597358	chr19	+	14597000	14597378	True	NM_001146693,NM_202469,NM_202468,NM_005716,NM_202494,NM_202467,NM_202470	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,-,-,-,-,-	LOC100130932,GIPC1,GIPC1,GIPC1,GIPC1,GIPC1,GIPC1	2379,9616,9616,9616,9616,9616,9616
chr17:75472103-75472712	chr17	+	75472174	75472750	True	NM_001113495,NR_036200	chr17,chr17	+,-	SEPT9,MIR4316	-900,-79038
chr2:152144945-152145477	chr2	+	152145019	152145471	True	NM_004688,NM_007115	chr2,chr2	-,+	NMI,TNFAIP6	1009,68634
chr2:135479031-135479243	chr2	+	135479158	135479292	True	NM_138326,NM_030923	chr2,chr2	+,-	ACMSD,TMEM163	116893,-2587
chr6:4129438-4130635	chr6	+	4129769	4130672	True	NM_006117,NR_028588,NM_001085401,NM_206836,NM_001166010	chr6,chr6,chr6,chr6,chr6	-,-,+,-,-	ECI2,ECI2,C6orf201,ECI2,ECI2	5209,5209,-50380,5209,5080
chr20:1450679-1451071	chr20	+	1450680	1451064	True	NM_182483,NM_016143,NM_014723,NM_018839	chr20,chr20,chr20,chr20	-,-,+,-	NSFL1C,NSFL1C,SNPH,NSFL1C	-2263,-2263,-203772,-2263
chr10:76859381-76859834	chr10	+	76859405	76859643	True	NM_016364,NM_001174156,NM_001007271,NM_001007273,NM_001007272	chr10,chr10,chr10,chr10,chr10	-,+,-,-,-	DUSP13,SAMD8,DUSP13,DUSP13,DUSP13	-157,11749,9377,9377,9377
chr19:4343088-4343350	chr19	+	4343093	4343329	True	NM_001159846,NM_001013841,NM_032868,NM_017720	chr19,chr19,chr19,chr19	+,-,+,-	MPND,STAP2,MPND,STAP2	194,-4246,194,-4246
chr8:38124211-38125863	chr8	+	38124327	38125663	True	NM_001164232,NM_001102560,NM_001102559,NM_032483	chr8,chr8,chr8,chr8	+,-,-,-	DDHD2,PPAPDC1B,PPAPDC1B,PPAPDC1B	-34917,1125,1125,1125
chr10:104179918-104180280	chr10	+	104180124	104180262	True	NM_024326,NM_002779	chr10,chr10	+,-	FBXL15,PSD	-604,-1223
chr3:179321790-179322193	chr3	+	179321790	179322166	True	NM_001199958,NM_002492,NM_177988,NM_020409,NM_001199957	chr3,chr3,chr3,chr3,chr3	+,+,-,-,+	NDUFB5,NDUFB5,MRPL47,MRPL47,NDUFB5	408,408,318,318,408
chr6:42791779-42792852	chr6	+	42792350	42792592	True	NM_015349,NM_001008739	chr6,chr6	+,-	KIAA0240,C6orf226	-3617,66016
chr11:89956585-89957581	chr11	+	89956654	89957629	True	NM_012124,NM_005467,NM_001144073	chr11,chr11,chr11	-,+,-	CHORDC1,NAALAD2,CHORDC1	-122,-88887,-122
chr5:174905986-174906319	chr5	+	174906117	174906316	True	NM_000794,NM_022754	chr5,chr5	-,+	DRD1,SFXN1	-34954,-654
chr12:121153687-121154507	chr12	+	121153751	121154519	True	NM_001080533,NM_000017,NM_198202	chr12,chr12,chr12	+,+,-	UNC119B,ACADS,POP5	-5971,9051,-134550
chr11:118873341-118873998	chr11	+	118873408	118874046	True	NM_198489,NR_003040	chr11,chr11	+,-	CCDC84,RPL23AP64	-4617,307
chrX:109560174-109560503	chrX	+	109560176	109560503	True	NM_020769,NM_015365,NM_001025580	chrX,chrX,chrX	+,-,-	RGAG1,AMMECR1,AMMECR1	101781,927,927
chr17:79213108-79213406	chr17	+	79213341	79213455	True	NM_144679,NM_001086521	chr17,chr17	-,+	C17orf56,C17orf89	-450,-281
chr5:101834527-101834727	chr5	+	101834543	101834729	True	NM_000919,NM_173488	chr5,chr5	+,-	PAM,SLCO6A1	366797,41
chr9:131419347-131419732	chr9	+	131419409	131419690	True	NM_001122821,NM_052844	chr9,chr9	+,-	SET,WDR34	26243,-280
chr5:271221-271534	chr5	+	271433	271521	True	NM_145265,NM_013232	chr5,chr5	-,+	CCDC127,PDCD6	-53136,214
chr9:135228718-135229636	chr9	+	135228809	135229429	True	NM_207417,NM_015046	chr9,chr9	+,-	C9orf171,SETX	56181,993
chr7:131244025-131245753	chr7	+	131244194	131245645	True	NM_001018111,NM_005397,NM_013255	chr7,chr7,chr7	-,-,+	PODXL,PODXL,MKLN1	-2818,-2818,-231659
chr2:233322041-233322719	chr2	+	233322086	233322752	True	NM_001631,NM_004826	chr2,chr2	+,-	ALPI,ECEL1	-1304,29830
chr6:165723305-165724414	chr6	+	165723540	165724220	True	NM_144980,NR_027284	chr6,chr6	-,+	C6orf118,LOC441177	-429,676818
chr5:1344137-1344767	chr5	+	1344232	1344724	True	NM_182632,NM_030782	chr5,chr5	+,-	SLC6A18,CLPTM1L	-118814,328
chr4:36200309-36201004	chr4	+	36200355	36200835	True	NM_015230,NM_001136536	chr4,chr4	-,+	ARAP2,DTHD1	45194,82408
chr1:153324312-153325123	chr1	+	153324370	153325167	True	NM_020393,NM_002965	chr1,chr1	-,+	PGLYRP4,S100A9	-3348,5162
chr7:148726259-148726976	chr7	+	148726342	148726864	True	NM_004911,NM_020781	chr7,chr7	-,+	PDIA4,ZNF398	-560,96643
chr7:23531655-23531926	chr7	+	23531851	23531914	True	NM_006547,NR_026676	chr7,chr7	-,+	IGF2BP3,RPS2P32	-21856,-1895
chr12:52218095-52218682	chr12	+	52218163	52218550	True	NM_001130015,NM_001013690	chr12,chr12	+,-	ANKRD33,FIGNL2	63242,7202
chr5:133968528-133968921	chr5	+	133968531	133968617	True	NM_021982,NM_016103,NM_001033503	chr5,chr5,chr5	+,-,-	SEC24A,SAR1B,SAR1B	15861,2,2
chr9:99654119-99654808	chr9	+	99654157	99654849	True	NR_028350,NM_001001662	chr9,chr9	+,-	LOC441454,ZNF782	16507,-37768
chr6:32629918-32630854	chr6	+	32630047	32630792	True	NM_002122,NM_002123	chr6,chr6	+,-	HLA-DQA1,HLA-DQB1	-24915,3724
chr17:61678614-61678815	chr17	+	61678621	61678835	True	NM_016360,NM_030576	chr17,chr17	+,-	TACO1,LIMD2	-441,98734
chr2:131853193-131853970	chr2	+	131853581	131853653	True	NM_001100623,NM_001009993,NM_017958	chr2,chr2,chr2	+,-,+	PLEKHB2,FAM168B,PLEKHB2	8766,-2577,8766
chr6:107813393-107813683	chr6	+	107813432	107813719	True	NM_018013,NM_020381	chr6,chr6	+,-	SOBP,PDSS2	-2166,-32653
chr12:19398584-19399071	chr12	+	19398682	19398830	True	NM_019012,NM_033123	chr12,chr12	+,-	PLEKHA5,PLCZ1	-116114,-507764
chr19:475864-477293	chr19	+	476635	477303	True	NM_182577,NM_130760	chr19,chr19	-,+	ODF3L2,MADCAM1	-1652,19186
chr8:39769933-39770961	chr8	+	39770017	39770971	True	NM_001464,NM_002164	chr8,chr8	-,+	ADAM2,IDO1	-74238,356
chr1:108508030-108508529	chr1	+	108508154	108508546	True	NM_001143987,NM_006113	chr1,chr1	+,-	NBPF6,VAV3	484357,-609
chr9:130539110-130539929	chr9	+	130539113	130539565	True	NR_036055,NM_001261,NM_170600,NM_005489	chr9,chr9,chr9,chr9	+,+,-,-	MIR2861,CDK9,SH2D3C,SH2D3C	8631,8739,1533,-5492
chr15:92828576-92829852	chr15	+	92828859	92829885	True	NM_006011,NR_021493	chr15,chr15	+,-	ST8SIA2,LOC100144604	107254,285658
chr1:86174354-86174737	chr1	+	86174402	86174652	True	NM_001554,NM_001170670,NM_017953	chr1,chr1,chr1	+,-,-	CYR61,ZNHIT6,ZNHIT6	-128016,-286,-286
chrY:27602748-27604089	chrY	+	27603343	27603647	True	NR_002179,NR_002195,NR_001555	chrY,chrY,chrY	-,+,+	TTTY17C,GOLGA2P3Y,GOLGA2P2Y	-272423,-1936,-1936
chrY:27602748-27604089	chrY	-	26358788	26359092	False	NR_002195,NR_001526,NR_001555	chrY,chrY,chrY	-,+,-	GOLGA2P3Y,TTTY17A,GOLGA2P2Y	1936,272386,1936
chr11:47238446-47238849	chr11	+	47238542	47238610	True	NM_000107,NM_016223	chr11,chr11	+,-	DDB2,PACSIN3	-2100,-30532
chr8:125372525-125373394	chr8	+	125372727	125373398	True	NM_017956,NM_194291	chr8,chr8	+,-	TRMT12,TMEM65	89649,11592
chr2:11273976-11274273	chr2	+	11274074	11274262	True	NM_182500,NM_004850	chr2,chr2	+,-	C2orf50,ROCK2	-946,210499
chr2:127311752-127312211	chr2	+	127311759	127312101	True	NM_002101,NM_139348	chr2,chr2	+,-	GYPC,BIN1	101582,552815
chr19:18336522-18336744	chr19	+	18336525	18336793	True	NM_001098819,NM_001098818,NM_032683	chr19,chr19,chr19	-,-,+	PDE4C,PDE4C,MPV17L2	-1222,505,-32536
chr4:130013263-130014721	chr4	+	130013293	130014387	True	NM_001099783,NM_144643,NM_173487	chr4,chr4,chr4	+,-,+	C4orf33,SCLT1,C4orf33	2894,427,441
chr2:37192952-37193242	chr2	+	37192995	37193197	True	NM_174931,NM_003162	chr2,chr2	+,-	CCDC75,STRN	118396,468
chrY:9598692-9598926	chrY	+	9598726	9598929	True	NR_001538,NR_003590	chrY,chrY	-,+	TTTY1,TTTY2B	13020,-24882
chrY:9598692-9598926	chrY	-	6271440	6271643	False	NR_001538,NR_001536	chrY,chrY	+,-	TTTY1,TTTY2	-13020,24892
chr8:8860642-8862029	chr8	+	8860886	8861961	True	NM_153332,NM_004225	chr8,chr8	+,-	ERI1,MFHAS1	-623,-109755
chr17:62085409-62086373	chr17	+	62085453	62086409	True	NM_001164257,NM_000873,NM_001191031,NM_001191030,NM_001191029	chr17,chr17,chr17,chr17,chr17	+,-,+,+,+	C17orf72,ICAM2,C17orf72,C17orf72,C17orf72	-9793,-1170,-9793,-9793,-9793
chr10:32048607-32048864	chr10	+	32048757	32048865	True	NM_001174094,NM_018287	chr10,chr10	+,-	ZEB1,ARHGAP12	-438744,168955
chr9:5886074-5886721	chr9	+	5886365	5886767	True	NM_024896,NM_005511	chr9,chr9	-,+	ERMP1,MLANA	-53284,4141
chr16:79804220-79804436	chr16	+	79804244	79804450	True	NM_005360,NM_130897	chr16,chr16	-,+	MAF,DYNLRB2	-169622,770403
chrX:13677835-13679122	chrX	+	13678112	13678619	True	NM_001011658,NM_152634	chrX,chrX	-,+	TRAPPC2,TCEANC	74185,-6869
chr17:291942-292285	chr17	+	292001	292258	True	NM_182705,NM_001013672	chr17,chr17	-,+	FAM101B,C17orf97	3523,-31941
chr16:65257365-65257764	chr16	+	65257462	65257795	True	NM_001795,NM_001797	chr16,chr16	+,-	CDH5,CDH11	1142729,-101543
chr12:31882239-31882547	chr12	+	31882326	31882526	True	NR_004854,NM_001135863,NM_001113402	chr12,chr12,chr12	-,+,-	AMN1,METTL20,AMN1	-218,-69768,-218
chr11:47447364-47447650	chr11	+	47447427	47447587	True	NM_002804,NM_152264	chr11,chr11	-,+	PSMC3,SLC39A13	487,-17432
chr1:16398739-16399469	chr1	+	16398755	16399099	True	NM_182623,NM_001165945	chr1,chr1	-,+	FAM131C,CLCNKB	1078,-23522
chr3:58522058-58522280	chr3	+	58522092	58522232	True	NM_003500,NM_153331	chr3,chr3	-,+	ACOX2,KCTD6	755,-38051
chr22:24232496-24232892	chr22	+	24232565	24232879	True	NM_198440,NM_002415	chr22,chr22	-,+	DERL3,MIF	-51366,3685
chr2:217557614-217558021	chr2	+	217557634	217558007	True	NM_000597,NM_000599	chr2,chr2	+,-	IGFBP2,IGFBP5	-59558,2315
chr19:52936912-52937640	chr19	+	52937048	52937384	True	NM_001143939,NM_001143938,NM_001105549	chr19,chr19,chr19	+,+,-	ZNF534,ZNF534,ZNF83	-2440,-2440,204310
chr1:159914805-159915188	chr1	+	159914854	159915224	True	NM_001135050,NM_033438,NM_001146173,NM_020125,NM_001146172,NM_020789	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,-	IGSF9,SLAMF9,SLAMF9,SLAMF8,SLAMF9,IGSF9	212,8870,8870,-118426,8870,212
chr18:32868325-32869460	chr18	+	32868466	32869508	True	NR_024566,NR_024565,NM_001166012,NM_001112734	chr18,chr18,chr18,chr18	+,+,-,-	ZNF271,ZNF271,ZSCAN30,ZSCAN30	727,727,738,738
chr4:185395399-185395658	chr4	+	185395403	185395659	True	NM_002199,NM_152683	chr4,chr4	-,+	IRF2,CCDC111	117,175107
chr9:46274502-46275309	chr4	-	3546525	3546576	True	NM_002337,NM_173660	chr4,chr4	-,+	LRPAP1,DOK7	-12301,-81544
chr9:46274502-46275309	chr9	+	46274728	46275035	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2643998,412530
chr9:46274502-46275309	chr9	+	67683645	67683952	False	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	110288,242808
chr9:46274502-46275309	chr9	-	47165605	47165661	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-3534875,-478090
chr11:89396303-89396807	chr11	+	89396555	89396837	True	NM_153696,NM_001143837	chr11,chr11	+,-	FOLH1B,NOX4	-4141,-73776
chr11:89396303-89396807	chr11	-	49203505	49203555	False	NM_001014986,NR_027044	chr11,chr11	-,+	FOLH1,LOC440040	26717,376524
chr12:7940294-7940592	chr12	+	7940520	7940586	True	NM_024865,NM_203503	chr12,chr12	+,-	NANOG,CLEC4C	1408,-38451
chr15:41117622-41118175	chr15	+	41117711	41118083	True	NM_017726,NM_003710,NM_001130143	chr15,chr15,chr15	-,+,-	PPP1R14D,SPINT1,PPP1R14D	2874,18162,2874
chr15:55564050-55564487	chr15	+	55564058	55564367	True	NM_004855,NM_004580,NM_183236,NM_183234	chr15,chr15,chr15,chr15	+,-,-,-	PIGB,RAB27A,RAB27A,RAB27A	46765,-1473,-951,-1574
chr3:66025581-66027474	chr3	+	66025833	66027461	True	NM_173471,NM_015520,NM_001033057,NM_004742	chr3,chr3,chr3,chr3	+,-,-,-	SLC25A26,MAGI1,MAGI1,MAGI1	91823,-1324,-1324,-1324
chr14:64111474-64112060	chr14	+	64111530	64111875	True	NM_080666,NM_001008726,NM_015180	chr14,chr14,chr14	-,-,+	WDR89,WDR89,SYNE2	-2939,-3405,207807
chr15:55700980-55701322	chr15	+	55700984	55701227	True	NM_001198784,NM_001204450,NM_001204451,NM_004748,NM_020739	chr15,chr15,chr15,chr15,chr15	+,-,-,-,-	FLJ27352,CCPG1,CCPG1,CCPG1,CCPG1	-319,-276,-276,-410,-276
chr17:27169312-27169529	chr17	+	27169334	27169496	True	NM_018182,NM_001077498,NM_005702	chr17,chr17,chr17	-,-,+	C17orf63,C17orf63,ERAL1	395,395,12546
chr17:73265865-73266288	chr17	+	73266023	73266269	True	NM_015971,NR_036520,NM_001172703,NM_001172704,NM_138619,NM_020679,NR_033345,NM_014001	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,-,-,-,-,-,-	MRPS7,LOC100287042,GGA3,GGA3,GGA3,MIF4GD,GGA3,GGA3	-8326,1110,-7579,-7579,-8316,1084,-8316,-8316
chr12:57914703-57914965	chr12	+	57914899	57914961	True	NM_001195055,NM_052897,NM_001195053,NM_004083,NM_001195054,NM_001195057,NM_001195056	chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,+,-,-,-,-,-	DDIT3,MBD6,DDIT3,DDIT3,DDIT3,DDIT3,DDIT3	-599,1697,-599,-599,-599,-599,-599
chr17:79669776-79670109	chr17	+	79669782	79670076	True	NM_001040025,NM_002949,NM_012140	chr17,chr17,chr17	-,+,+	ARL16,MRPL12,SLC25A10	-18828,323,9294
chr5:33887333-33888008	chr5	+	33887356	33887855	True	NM_016568,NM_030955	chr5,chr5	+,-	RXFP3,ADAMTS12	48635,4326
chr11:4976261-4977922	chr11	+	4976618	4977888	True	NM_001005329,NM_021801,NM_001004748	chr11,chr11,chr11	-,+,-	OR51A4,MMP26,OR51A2	-8288,31535,-169
chr9:95233774-95233990	chr9	+	95233773	95233946	True	NM_001193335,NM_001012267	chr9,chr9	-,+	ASPN,CENPP	10956,-146088
chr20:9489438-9490354	chr20	+	9489463	9490231	True	NM_012261,NM_001199897,NM_020341	chr20,chr20,chr20	+,+,-	C20orf103,C20orf103,PAK7	4773,4773,329506
chr2:1419437-1420732	chr2	+	1419650	1420596	True	NM_175721,NM_175719,NM_012293,NM_175722,NM_000547	chr2,chr2,chr2,chr2,chr2	+,+,-,+,+	TPO,TPO,PXDN,TPO,TPO	-1521,-2468,327745,-1521,-2468
chr19:2327694-2328126	chr19	+	2327717	2327997	True	NM_152988,NM_001077238,NM_016199	chr19,chr19,chr19	+,+,-	SPPL2B,SPPL2B,LSM7	631,631,667
chr4:56690972-56691519	chr4	+	56691035	56691549	True	NR_003935,NM_006681	chr4,chr4	+,-	LOC644145,NMU	-4856,-188570
chr12:4384426-4384749	chr12	+	4384445	4384559	True	NM_001759,NM_020638	chr12,chr12	+,-	CCND2,FGF23	-1594,104385
chr22:46481119-46481555	chr22	+	46481251	46481525	True	NR_037413,NM_018280,NR_027033	chr22,chr22,chr22	+,-,+	MIR3619,C22orf26,LOC400931	5398,-31227,351
chr9:79634579-79634951	chr9	+	79634585	79634945	True	NM_015225,NM_001013735	chr9,chr9	-,+	PRUNE2,FOXB2	-113582,-65
chr16:12899242-12899526	chr16	+	12899241	12899499	True	NM_001145205,NM_018340,NM_001099455	chr16,chr16,chr16	+,-,-	SHISA9,CPPED1,CPPED1	95977,-1497,-1497
chr1:162612221-162613362	chr1	+	162612392	162613189	True	NM_178550,NM_006182	chr1,chr1	-,+	C1orf110,DDR2	225473,-10217
chr17:39576783-39577011	chr17	+	39576803	39577060	True	NM_030975,NM_003770	chr17,chr17	+,-	KRTAP9-9,KRT37	-165221,3813
chr4:77997490-77998477	chr4	+	77997672	77998494	True	NM_004354,NM_006835	chr4,chr4	+,-	CCNG2,CCNI	79862,-547
chrY:22923014-22923370	chrY	+	22923184	22923402	True	NM_001039567,NR_001542	chrY,chrY	+,-	RPS4Y2,TTTY10	-5281,-242070
chr13:113812964-113813294	chr13	+	113813022	113813242	True	NM_001127202,NM_003891	chr13,chr13	-,+	PCID2,PROZ	49845,-105
chr1:2323689-2324394	chr1	+	2323801	2324395	True	NM_024848,NM_007033	chr1,chr1	-,+	MORN1,RER1	-808,-638
chr8:22855743-22856636	chr8	+	22855885	22856658	True	NM_003842,NM_015178,NM_001160037,NM_144962	chr8,chr8,chr8,chr8	-,+,+,-	TNFRSF10B,RHOBTB2,RHOBTB2,PEBP4	70092,433,-2582,-70464
chr1:110014619-110015535	chr1	+	110015028	110015190	True	NM_001040709,NM_020703	chr1,chr1	+,-	SYPL2,AMIGO1	-5986,37196
chr8:144417208-144417524	chr8	+	144417271	144417547	True	NM_052963,NM_052924	chr8,chr8	-,+	TOP1MT,RHPN1	-221,33477
chr11:1787549-1788383	chr11	+	1787591	1788349	True	NM_138567,NM_001909,NM_053005	chr11,chr11,chr11	+,-,-	SYT8,CTSD,MOB2	67324,-2369,-2090
chr5:38258131-38258552	chr5	+	38258207	38258551	True	NM_152403,NM_001127671	chr5,chr5	+,-	EGFLAM,LIFR	-19,298247
chr2:207308899-207309219	chr2	+	207308990	207309252	True	NM_005279,NM_003812	chr2,chr2	-,+	GPR1,ADAM23	-226219,-673
chr15:70393600-70393938	chr15	+	70393636	70393979	True	NM_020908,NM_001105192,NM_005078,NR_026764	chr15,chr15,chr15,chr15	-,-,-,+	TLE3,TLE3,TLE3,C15orf50	-3380,-3380,-3380,-266114
chr16:69957086-69958228	chr16	+	69957370	69958055	True	NR_029681,NM_199424,NR_003610	chr16,chr16,chr16	+,+,-	MIR140,WWP2,PDXDC2P	8928,845,141846
chr11:64019348-64019575	chr11	+	64019404	64019530	True	NM_138689,NM_057092,NM_000932,NM_001184883	chr11,chr11,chr11,chr11	-,+,+,+	PPP1R14B,FKBP2,PLCB3,PLCB3	-4991,-9867,-460,-460
chr20:50383458-50383724	chr20	+	50383471	50383733	True	NM_006045,NM_014484	chr20,chr20	-,+	ATP9A,MOCS3	1225,-808159
chr2:217277333-217278121	chr2	+	217277627	217278065	True	NM_014140,NM_020814,NM_001127207	chr2,chr2,chr2	+,-,+	SMARCAL1,MARCH4,SMARCAL1	-541,-40877,-205
chr17:43715495-43716380	chr17_ctg5_hap1	-	1151136	1151350	False	NR_026901,NR_026906,NR_026905	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	+,-,-	LOC644172,C17orf69,C17orf69	37088,-164,-164
chr17:43715495-43716380	chr17	+	43715930	43716144	True	NR_026901,NR_026906,NR_026905	chr17,chr17,chr17	-,+,+	LOC644172,C17orf69,C17orf69	-36182,196,196
chr11:83948130-83948800	chr11	+	83948260	83948749	True	NM_182603,NM_001142700	chr11,chr11	+,-	ANKRD42,DLG2	-1043020,35631
chr16:67392267-67393950	chr16	+	67392747	67393734	True	NM_001100915,NM_001161575	chr16,chr16	-,+	KCTD19,LRRC36	-32086,-11544
chr11:119292921-119293217	chr11	+	119292965	119293031	True	NM_006288,NR_034160	chr11,chr11	-,+	THY1,LOC100499227	1265,-40528
chr11:10830298-10830567	chr11	+	10830446	10830588	True	NR_034137,NM_001172705,NR_004403,NM_001042559,NM_001418	chr11,chr11,chr11,chr11,chr11	+,-,-,-,-	LOC729013,EIF4G2,SNORD97,EIF4G2,EIF4G2	49175,-903,-7291,44,44
chr17:61524680-61525110	chr17	+	61524693	61525091	True	NM_001017917,NM_001915,NM_000789,NM_001017916	chr17,chr17,chr17,chr17	-,-,+,-	CYB561,CYB561,ACE,CYB561	-6486,-971,29330,-1148
chr22:21921543-21921985	chr22	+	21921739	21921867	True	NM_001128633,NR_028437,NM_003347,NR_028436	chr22,chr22,chr22,chr22	-,+,+,+	RIMBP3C,UBE2L3,UBE2L3,UBE2L3	-15989,89,89,89
chr11:915249-915875	chr11	+	915260	915452	True	NM_012305,NM_001142675,NM_001142674,NM_001142677,NM_001142676,NM_023947	chr11,chr11,chr11,chr11,chr11,chr11	+,-,-,-,-,-	AP2A2,CHID1,CHID1,CHID1,CHID1,CHID1	10388,-202,-4386,-4386,-4386,-4386
chr5:157068475-157069043	chr5	+	157068685	157069009	True	NM_001145132,NM_007017	chr5,chr5	+,-	C5orf52,SOX30	29551,10475
chr5:78529848-78530169	chr5	+	78529885	78530084	True	NM_013391,NM_152405	chr5,chr5	-,+	DMGDH,JMY	-164436,1840
chr8:128807190-128808162	chr8	+	128807189	128808095	True	NR_003367,NR_024393,NR_031609	chr8,chr8,chr8	+,-,+	PVT1,LOC727677,MIR1204	-472,-312805,112
chr3:5227089-5227730	chr3	+	5227150	5227704	True	NM_014674,NR_037903	chr3,chr3	+,-	EDEM1,LOC100507582	1654,-278964
chrX:83004038-83004915	chr8	-	73942596	73944301	False	NM_153225,NM_017489	chr8,chr8	-,+	C8orf84,TERF1	62911,-23205
chrX:83004038-83004915	chrX	+	83004140	83004884	True	NM_021118,NM_014496	chrX,chrX	+,-	CYLC1,RPS6KA6	111285,438109
chr17:45092464-45093603	chr17	+	45092857	45092943	True	NM_203400,NM_054022	chr17,chr17	-,+	RPRML,GOSR2	-36243,-92433
chr15:42789650-42790103	chr15	+	42790011	42790075	True	NM_003825,NM_022473,NM_130798	chr15,chr15,chr15	+,-,+	SNAP23,ZFP106,SNAP23	-2233,-40281,-2233
chr7:76039955-76040234	chr7	+	76039956	76040044	True	NM_080744,NM_007155	chr7,chr7	-,+	SRCRB4D,ZP3	-944,-13166
chr5:139176302-139177579	chr5	+	139176557	139177573	True	NM_032289,NM_001184935	chr5,chr5	+,-	PSD2,NRG2	-1204,245361
chr2:9561738-9562481	chr2	+	9561855	9562513	True	NM_022334,NM_004763,NM_016207	chr2,chr2,chr2	-,-,+	ITGB1BP1,ITGB1BP1,CPSF3	1180,1180,1354
chr11:33181064-33182735	chr11	+	33181362	33182636	True	NR_034027,NM_001033505,NM_001033506,NM_001326	chr11,chr11,chr11,chr11	+,-,-,-	LOC338739,CSTF3,CSTF3,CSTF3	566,460,460,460
chr15:62361761-62362172	chr15	+	62361947	62362163	True	NM_017684,NM_001018088,NM_018080,NM_020821,NM_207322	chr15,chr15,chr15,chr15,chr15	-,-,-,-,+	VPS13C,VPS13C,VPS13C,VPS13C,C2CD4A	-9283,-9283,-9283,-9283,-2829
chr14:101359041-101360178	chr14	+	101359079	101360125	True	NR_029696,NR_030173,NR_029699,NR_024149,NM_001134888	chr14,chr14,chr14,chr14,chr14	+,+,+,+,-	MIR127,MIR432,MIR136,MEG8,RTL1	-9814,-8310,-8091,981,-7895
chr3:66013521-66014432	chr3	+	66013635	66014465	True	NM_173471,NM_001033057	chr3,chr3	+,-	SLC25A26,MAGI1	104819,10094
chr3:132136982-132138378	chr3	+	132137054	132138411	True	NM_032169,NM_015268	chr3,chr3	-,+	ACAD11,DNAJC13	240616,-552
chrY:9161429-9162477	chrY	+	9161555	9162431	True	NR_001547,NM_001164471	chrY,chrY	-,+	RBMY1A3P,TSPY4	-1072,33020
chr11:60634604-60635144	chr11	+	60634734	60635192	True	NM_004778,NM_207341	chr11,chr11	-,+	GPR44,ZP1	-11290,26
chr12:12717778-12718552	chr12	+	12717906	12718223	True	NM_001310,NM_030640	chr12,chr12	+,-	CREBL2,DUSP16	46607,-2458
chr19:46543564-46544598	chr19	+	46543756	46544616	True	NR_030412,NM_001002923	chr19,chr19	+,-	MIR769,IGFL4	-21617,-12
chr15:65417892-65419649	chr15	+	65418089	65419420	True	NM_005707,NM_001101362	chr15,chr15	-,+	PDCD7,KBTBD13	6804,-48998
chr12:119615635-119616549	chr12	+	119615821	119616422	True	NR_024246,NM_014365	chr12,chr12	-,+	LOC144742,HSPB8	124813,172
chr19:36159537-36160495	chr19	+	36159582	36160271	True	NM_024660,NM_007000	chr19,chr19	-,+	IGFLR1,UPK1A	73130,-1918
chr5:176839308-176840438	chr5	+	176839532	176840200	True	NM_000505,NM_001004105	chr5,chr5	-,+	F12,GRK6	-2955,13486
chr11:69926095-69926689	chr11	+	69926192	69926685	True	NM_005247,NM_018043,NR_030691	chr11,chr11,chr11	-,+,+	FGF3,ANO1,ANO1	-292000,-1835,4830
chr14:59100660-59101964	chr14	+	59100688	59101986	True	NM_016651,NM_012460,NM_001079520	chr14,chr14,chr14	+,-,+	DACT1,TIMM9,DACT1	2770,-206456,2770
chr20:55907549-55909369	chr20	+	55907692	55909104	True	NM_198265,NM_012444,NR_036219	chr20,chr20,chr20	+,+,-	SPO11,SPO11,MIR4325	-2913,-2913,-11045
chr8:42195578-42196020	chr8	+	42195591	42195911	True	NM_014420,NM_002690	chr8,chr8	-,+	DKK4,POLB	38813,118
chr3:49967435-49967778	chr3	+	49967546	49967794	True	NM_001167582,NM_005777,NM_032355,NM_001142501	chr3,chr3,chr3,chr3	+,+,-,-	RBM6,RBM6,MON1A,MON1A	9682,9682,-101,-101
chr3:133525521-133526255	chr3	+	133525657	133525956	True	NM_016577,NM_021203	chr3,chr3	-,+	RAB6B,SRPRB	88790,-22834
chr15:50976692-50977515	chr15	+	50976886	50977347	True	NM_017672,NM_007347	chr15,chr15	-,+	TRPM7,AP4E1	1726,223598
chr1:27245475-27246700	chr1	+	27246027	27246679	True	NM_021969,NM_006600	chr1,chr1	-,+	NR0B2,NUDC	-5460,1544
chr6:167570983-167571193	chr6	+	167571066	167571236	True	NM_005299,NM_001145121	chr6,chr6	-,+	GPR31,TCP10L2	133,12844
chr5:19922776-19923144	chr5	+	19922775	19923195	True	NM_001167667,NR_027027	chr5,chr5	-,+	CDH18,GUSBP1	65218,1536393
chr2:220251386-220251810	chr2	+	220251461	220251859	True	NM_012100,NM_001927	chr2,chr2	-,+	DNPEP,DES	853,31239
chr6:36354536-36354912	chr6	+	36354638	36354836	True	NM_016135,NM_173562	chr6,chr6	-,+	ETV7,KCTD20	681,55707
chr12:7865201-7865463	chr12	+	7865393	7865511	True	NM_199286,NM_020634	chr12,chr12	+,-	DPPA3,GDF3	-1355,-17033
chr5:41868747-41869598	chr5	+	41868881	41869621	True	NM_000436,NM_175921	chr5,chr5	-,+	OXCT1,C5orf51	1220,34848
chr17:3748912-3749137	chr17	+	3748915	3748975	True	NM_018553,NM_031965,NM_001114118	chr17,chr17,chr17	-,+,-	C17orf85,GSG2,C17orf85	615,-121769,615
chr7:158380895-158381103	chr7	+	158380960	158381031	True	NM_130843,NM_130842,NM_018051,NM_002847	chr7,chr7,chr7,chr7	-,-,+,-	PTPRN2,PTPRN2,WDR60,PTPRN2	-478,-478,268237,-478
chr4:88224737-88225315	chr4	+	88224801	88224940	True	NM_001136230,NM_024047	chr4,chr4	-,+	HSD17B13,NUDT9	19167,118794
chr22:38143713-38143930	chr22	+	38143713	38143897	True	NM_138797,NM_138632,NM_007032	chr22,chr22,chr22	-,+,+	ANKRD54,TRIOBP,TRIOBP	96506,-1523,-1523
chrX:79279640-79281180	chrX	+	79279879	79281190	True	NM_001109878,NM_001109879,NM_004867,NM_016954	chrX,chrX,chrX,chrX	+,+,-,+	TBX22,TBX22,ITM2A,TBX22	-9675,-9675,-656830,-2188
chr4:290979-291307	chr4	+	291077	291254	True	NM_001137608,NM_003441	chr4,chr4	-,+	ZNF732,ZNF141	-1133,40341
chr7:150724069-150724906	chr7	+	150724618	150724954	True	NM_173681,NM_007188	chr7,chr7	-,+	ATG9B,ABCB8	-3032,555
chrX:150562606-150563021	chrX	+	150562797	150562941	True	NM_001017980,NM_134446	chrX,chrX	+,-	VMA21,CD99L2	2715,-495508
chr19:11073922-11074482	chr19	+	11074094	11074446	True	NM_001128844,NM_024029,NM_003072,NM_001128849	chr19,chr19,chr19,chr19	+,-,+,+	SMARCA4,YIPF2,SMARCA4,SMARCA4	-2551,-34737,-2551,-2341
chr10:75634983-75635299	chr10	+	75635080	75635238	True	NM_001222,NM_172171,NM_172170,NM_172173,NM_001204492,NM_001145031,NM_172169	chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,-,+,-	CAMK2G,CAMK2G,CAMK2G,CAMK2G,CAMK2G,PLAU,CAMK2G	-731,-731,-731,-731,-731,35623,-731
chr3:142895495-142896046	chr6	-	32155901	32156051	True	NM_006913,NM_002586,NR_003129,NM_022107,NM_001136,NM_172197	chr6,chr6,chr6,chr6,chr6,chr6	+,-,+,-,-,-	RNF5,PBX2,RNF5P1,GPSM3,AGER,AGER	-9890,2062,-9820,7399,-3878,-3878
chr16:50059372-50059597	chr16	+	50059490	50059642	True	NM_153261,NM_015069	chr16,chr16	+,-	TMEM188,ZNF423	-352,-198572
chr4:166323898-166325101	chr4	+	166324161	166325109	True	NR_030304,NR_026575	chr4,chr4	+,-	MIR578,GK3P	-16826,-122986
chr4:103667849-103669694	chr4	+	103668477	103669738	True	NM_001008388,NM_005908	chr4,chr4	+,-	CISD2,MANBA	120396,12468
chr11:10713314-10714273	chr11	+	10713430	10714322	True	NM_001100167,NM_130385,NM_014633,NM_001100163	chr11,chr11,chr11,chr11	-,-,+,-	MRVI1,MRVI1,CTR9,MRVI1	833,1263,58488,1263
chr9:133712827-133714515	chr9	+	133712947	133714541	True	NM_005157,NM_198180	chr9,chr9	+,-	ABL1,QRFP	-2168,54734
chr9:108040688-108041333	chr9	+	108040981	108041369	True	NM_080546,NM_005502	chr9,chr9	+,-	SLC44A1,ABCA1	-34114,-350454
chr10:95356245-95358207	chr10	+	95356422	95358234	True	NM_006744,NM_006204	chr10,chr10	-,+	RBP4,PDE6C	2809,14110
chr16:3349716-3350322	chr16	+	3349718	3350362	True	NM_153028,NM_033208	chr16,chr16	+,-	ZNF75A,TIGD7	5070,5127
chr4:117517711-117518170	chr4	+	117517736	117518143	True	NM_152402,NR_031737	chr4,chr4	-,+	TRAM1L1,MIR1973	488650,-296916
chr2:62082184-62082501	chr2	+	62082185	62082497	True	NR_037710,NM_032180,NM_001201543,NM_152516	chr2,chr2,chr2,chr2	-,-,-,+	FAM161A,FAM161A,FAM161A,COMMD1	-907,-907,-907,50305
chr17:15452916-15454571	chr17	+	15453112	15454411	True	NM_001204478,NM_001130842	chr17,chr17	-,+	FAM18B2-CDRT4,ZNF286A	12593,148479
chr17:15452916-15454571	chr17	-	18696947	18697006	False	NM_016078,NM_001145045	chr17,chr17	+,-	FAM18B1,ZNF286B	-12425,-111375
chr13:49345424-49345805	chr13	+	49345453	49345833	True	NM_001268,NM_020377	chr13,chr13	-,+	RCBTB2,CYSLTR2	-238137,-64553
chr13:32610784-32611768	chr13	+	32610789	32611732	True	NM_001136571,NM_023037	chr13,chr13	-,+	ZAR1L,FRY	274416,-5403
chr5:75014128-75014388	chr5	+	75014127	75014251	True	NM_152408,NM_016218,NM_001099271	chr5,chr5,chr5	-,+,-	POC5,POLK,POC5	-5847,-206521,-814
chr9:131578346-131579865	chr9	+	131579848	131579914	True	NM_016390,NM_004435	chr9,chr9	-,+	C9orf114,ENDOG	12221,864
chr18:12948027-12948262	chr18	+	12948115	12948211	True	NM_031216,NM_001013437,NM_002828	chr18,chr18,chr18	+,+,-	SEH1L,SEH1L,PTPN2	-183,-183,-63781
chr12:77277116-77278502	chr12	+	77277126	77277971	True	NM_001321,NM_015336	chr12,chr12	-,+	CSRP2,ZDHHC17	-4327,-119323
chr15:34578365-34578715	chr15	+	34578608	34578699	True	NM_175741,NM_005135	chr15,chr15	+,-	C15orf55,SLC12A6	59366,32381
chr1:182990214-182991564	chr1	+	182990214	182991359	True	NM_030933,NM_002293	chr1,chr1	-,+	SHCBP1L,LAMC1	-67661,1235
chrX:140269418-140270499	chrX	+	140269475	140270341	True	NM_145664,NM_012317	chrX,chrX	+,-	SPANXB2,LDOC1	-172765,1019
chr11:441937-442187	chr11	+	441952	442014	True	NM_030783,NM_001012302	chr11,chr11	+,-	PTDSS2,ANO9	8265,47
chr2:27532094-27532361	chr2	+	27532263	27532408	True	NM_003353,NM_187841	chr2,chr2	-,+	UCN,TRIM54	-1133,-27018
chr12:122753101-122754021	chr12	+	122753430	122754060	True	NM_030765,NM_022916	chr12,chr12	+,-	B3GNT4,VPS33A	-65253,-2362
chr6:74103354-74104095	chr6	+	74103562	74104105	True	NM_001080507,NM_018665	chr6,chr6	-,+	OOEP,DDX43	-24047,179
chrX:49022038-49022450	chrX	+	49022083	49022441	True	NM_002668,NM_006150,NM_001099682,NM_001099681,NM_001099680,NM_024859	chrX,chrX,chrX,chrX,chrX,chrX	+,-,+,+,+,+	PLP2,PRICKLE3,MAGIX,MAGIX,MAGIX,MAGIX	5742,20385,-2953,-2953,-1864,-2953
chr19:6737916-6738252	chr19	+	6737923	6738167	True	NM_004240,NM_001080452	chr19,chr19	+,-	TRIP10,GPR108	1539,-290
chr18:2657872-2659157	chr18	+	2658232	2659123	True	NR_033754,NM_015295	chr18,chr18	-,+	LOC645158,SMCHD1	-5001,-2398
chr11:3689946-3691148	chr11	+	3690128	3691144	True	NM_004314,NM_020402	chr11,chr11	+,-	ART1,CHRNA10	-23818,1520
chr7:100317051-100317597	chr7	+	100317146	100317504	True	NM_000799,NM_022574	chr7,chr7	+,-	EPO,GIGYF1	918,-30276
chr16:14790329-14791433	chr16	+	14790458	14790686	True	NM_003561,NM_016561	chr16,chr16	-,+	PLA2G10,BFAR	-1932,-63843
chr16:14790329-14791433	chr16	+	14829576	14829804	False	NM_003561,NM_014287	chr16,chr16	-,+	PLA2G10,NOMO1	-41050,97838
chr19:10444519-10444794	chr19	+	10444611	10444783	True	NM_002162,NM_133452,NM_003259	chr19,chr19,chr19	-,-,+	ICAM3,RAVER1,ICAM5	5612,-297,-44007
chr3:120315292-120315559	chr3	+	120315344	120315546	True	NM_004547,NM_001168331,NM_000187	chr3,chr3,chr3	+,+,-	NDUFB4,NDUFB4,HGD	-267,-267,85922
chr3:125312211-125313743	chr3	+	125312628	125313770	True	NM_022776,NR_024250	chr3,chr3	-,+	OSBPL11,LOC100125556	661,321673
chr4:183064356-183064589	chr4	+	183064483	183064543	True	NR_031640,NR_027107	chr4,chr4	+,-	MIR1305,MGC45800	25902,1175
chr9:5339511-5339837	chr9	+	5339605	5339885	True	NM_002195,NM_006911	chr9,chr9	+,-	INSL4,RLN1	-108237,38
chr9:5339511-5339837	chr9	+	5304439	5304489	False	NM_005059,NM_134441,NM_002195	chr9,chr9,chr9	-,-,+	RLN2,RLN2,INSL4	141,141,-73071
chr18:72201773-72201983	chr18	+	72201864	72202020	True	NR_024484,NM_032649	chr18,chr18	-,+	LOC400657,CNDP1	63101,-223
chr20:21282490-21283354	chr20	+	21282578	21283386	True	NM_012255,NM_033176	chr20,chr20	+,-	XRN2,NKX2-4	555,94721
chr1:28773144-28774983	chr1	+	28773413	28774640	True	NM_023923,NR_003077	chr1,chr1	+,-	PHACTR4,SNORD99	-8803,130753
chr11:47428493-47428834	chr11	+	47428534	47428804	True	NM_002804,NM_001128225,NM_152264	chr11,chr11,chr11	-,+,+	PSMC3,SLC39A13,SLC39A13	19270,1241,1241
chr7:138458825-138459043	chr7	+	138458852	138458978	True	NM_130841,NM_001085429	chr7,chr7	-,+	ATP6V0A4,TMEM213	-70,23760
chr2:152815067-152815734	chr2	+	152815072	152815760	True	NM_001005747,NM_052905	chr2,chr2	-,+	CACNB4,FMNL2	14775,375990
chr8:133491683-133492183	chr8	+	133491723	133492141	True	NM_004519,NM_198513	chr8,chr8	-,+	KCNQ3,PHF20L1	913,295462
chr5:140725806-140726190	chr5	+	140725962	140726155	True	NM_032095,NM_018922,NM_005642,NM_032009,NM_032053,NM_032011,NM_018915,NM_018916,NM_018917	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,-,+,+,+,+,+,+	PCDHGB1,PCDHGB1,TAF7,PCDHGA2,PCDHGA4,PCDHGA3,PCDHGA2,PCDHGA3,PCDHGA4	3672,3672,-25611,-7662,8612,-2415,-7662,-2415,8612
chr3:138825787-138826609	chr3	+	138825992	138826598	True	NM_001134657,NR_026783	chr3,chr3	-,+	PRR23C,BPESC1	-62258,-3016
chr10:16859615-16859949	chr10	+	16859646	16859860	True	NM_012425,NM_030664,NM_152724	chr10,chr10,chr10	-,+,-	RSU1,PTER,RSU1	-193,-380730,-193
chr1:182361268-182361526	chr1	+	182361357	182361417	True	NR_034131,NM_001033044,NM_002065,NM_001033056,NM_172000	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	NCRNA00272,GLUL,GLUL,GLUL,TEDDM1	15338,-16,-16,-818,8384
chr20:32709186-32710232	chr20	+	32709329	32710011	True	NM_016732,NM_003908	chr20,chr20	+,-	RALY,EIF2S2	-127654,-9244
chr1:53187503-53188325	chr1	+	53187723	53187912	True	NM_024646,NM_023077	chr1,chr1	+,-	ZYG11B,SELRC1	4218,-23685
chr19:54107410-54107988	chr19	+	54107410	54107842	True	NM_001012728,NR_002938	chr19,chr19	+,-	DPRX,LOC284379	27467,-659
chr8:7923407-7923937	chr8	+	7923410	7923790	True	NR_031689,NR_027424	chr8,chr8	-,+	MIR548I3,FAM66E	22871,-110926
chr8:7923407-7923937	chr8	-	7537690	7537748	False	NM_001136572,NM_001164452	chr8,chr8	-,+	FAM90A7,FAM90A14	-97515,35216
chr8:7923407-7923937	chr8	-	12458526	12458584	False	NR_037492,NR_037495	chr8,chr8	-,+	MIR3926-1,MIR3926-2	126279,126161
chr15:59978935-59979862	chr15	+	59979311	59979909	True	NM_004751,NM_004330	chr15,chr15	+,-	GCNT3,BNIP2	-75390,1785
chr6:160770605-160771808	chr6	+	160770761	160771727	True	NM_003058,NM_021977	chr6,chr6	-,+	SLC22A2,SLC22A3	-90798,-1388
chr8:11139821-11141750	chr8	+	11139824	11141498	True	NM_173683,NM_015458	chr8,chr8	-,+	XKR6,MTMR9	-80949,501
chr12:83087468-83088315	chr12	+	83088171	83088300	True	NM_152588,NR_033192	chr12,chr12	+,-	TMTC2,CCDC59	-7289,-335587
chr17:47845120-47846459	chr17	+	47845371	47846365	True	NM_030802,NM_001199155	chr17,chr17	-,+	FAM117A,MYST2	-3853,19615
chr19:13226169-13226984	chr19	+	13226199	13227019	True	NM_017722,NM_052876,NM_001142554,NM_001136035	chr19,chr19,chr19,chr19	-,+,-,-	TRMT1,NACC1,TRMT1,TRMT1	494,2089,494,594
chr12:93775894-93776730	chr12	+	93776066	93776415	True	NM_003348,NM_199040,NM_019094,NR_002212	chr12,chr12,chr12,chr12	-,+,+,+	UBE2N,NUDT4,NUDT4,NUDT4P1	59668,-4421,-4421,-4376
chr1:6302925-6304270	chr1	+	6303038	6304235	True	NM_012405,NM_001024598	chr1,chr1	-,+	ICMT,HES3	-6994,16
chr8:42126082-42127076	chr8	+	42126423	42126845	True	NM_001190720,NM_001190721,NM_001190722,NR_033818,NR_033819,NM_033011,NR_033820,NM_001556	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	+,+,+,+,+,-,+,+	IKBKB,IKBKB,IKBKB,IKBKB,IKBKB,PLAT,IKBKB,IKBKB	1990,2029,1974,1974,1974,-61229,1974,1974
chr1:209881826-209883375	chr1	+	209882100	209883010	True	NM_005525,NM_000228	chr1,chr1	+,-	HSD11B1,LAMB3	-3962,-56280
chr10:82125880-82127004	chr10	+	82126169	82126861	True	NM_138812,NM_032372	chr10,chr10	-,+	DYDC1,DYDC2	-9669,-9668
chr13:100004095-100005148	chr13	+	100004166	100005045	True	NM_004951,NR_030353,NR_024013	chr13,chr13,chr13	-,+,+	GPR183,MIR623,FKSG29	-44417,3339,-543
chr1:117451208-117451996	chr1	+	117451349	117451749	True	NM_020440,NM_001145635	chr1,chr1	+,-	PTGFRN,TRIM45	939,212712
chr2:173422718-173422933	chr2	+	173422769	173422986	True	NR_026995,NM_002610	chr2,chr2	-,+	LOC91149,PDK1	178003,-2041
chr7:148787100-148787439	chr7	+	148787212	148787396	True	NM_152411,NM_020781	chr7,chr7	-,+	ZNF786,ZNF398	523,36111
chr2:106472583-106473779	chr2	+	106472653	106473751	True	NM_025076,NM_001004720	chr2,chr2	-,+	UXS1,NCK2	337094,-4508
chr1:69354056-69354464	chr1	+	69354113	69354173	True	NM_017779,NM_020794	chr1,chr1	-,+	DEPDC1,LRRC7	-391314,871684
chr8:110347883-110349210	chr8	+	110347950	110349243	True	NM_001193557,NR_036472,NM_020189,NR_036471,NM_001128211,NM_032869	chr8,chr8,chr8,chr8,chr8,chr8	+,+,+,+,-,-	ENY2,ENY2,ENY2,ENY2,NUDCD1,NUDCD1	-1450,-1450,-1450,-1450,-5788,-1600
chr19:43769659-43770369	chr19	+	43769796	43770162	True	NR_026881,NM_002784	chr19,chr19	+,-	PRG1,PSG9	83045,3570
chr10:18686248-18686986	chr10	+	18686406	18687020	True	NM_201570,NM_182543	chr10,chr10	+,-	CACNB2,NSUN6	2492,253580
chr16:58716626-58718314	chr16	+	58716871	58718095	True	NM_018231,NM_024860	chr16,chr16	-,+	SLC38A7,SETD6	629,-167540
chr10:73722623-73723339	chr10	+	73722754	73723290	True	NM_002778,NM_004273	chr10,chr10	-,+	PSAP,CHST3	-111672,829
chr21:42520258-42520900	chr21	+	42520281	42520804	True	NR_024100,NR_036167	chr21,chr21	-,+	C21orf130,MIR3197	-290,18679
chr11:76492207-76492410	chr11	+	76492214	76492410	True	NM_015516,NR_024042	chr11,chr11	+,-	TSKU,GUCY2E	1874,-59381
chrX:153712876-153713674	chrX	+	153713058	153713588	True	NM_001142392,NM_019848,NM_001142391,NM_014235,NM_017514,NM_006014	chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,+,-	SLC10A3,SLC10A3,SLC10A3,UBL4A,PLXNA3,LAGE3	5464,5464,5464,1394,-26486,-5462
chr6:52762703-52763792	chr6	+	52762714	52763834	True	NM_000847,NM_033481	chr6,chr6	-,+	GSTA3,FBXO9	10712,165961
chrX:106007032-106007283	chrX	+	106007053	106007156	True	NM_194463,NM_001171706	chrX,chrX	+,-	RNF128,RIPPLY1	-37223,139468
chr2:47595677-47596142	chr2	+	47595813	47596191	True	NR_030286,NM_001743,NM_002354	chr2,chr2,chr2	+,-,+	MIR559,CALM2,EPCAM	8622,-192073,95
chr1:11909077-11910372	chr1	+	11909486	11910364	True	NM_002521,NR_037806,NM_006172	chr1,chr1,chr1	-,+,-	NPPB,NPPA-AS1,NPPA	8678,-9162,-1646
chr14:60864664-60864983	chr14	+	60864666	60864926	True	NM_007374,NM_174978	chr14,chr14	+,-	SIX6,C14orf39	111011,87888
chr9:131796959-131797514	chr9	+	131797113	131797189	True	NM_020145,NM_032809	chr9,chr9	-,+	SH3GLB2,FAM73B	-6534,2063
chr5:121487966-121488440	chr5	+	121487971	121488402	True	NM_002317,NM_001195535	chr5,chr5	-,+	LOX,LOC728460	-73916,7468
chr5:107006370-107006669	chr5	+	107006383	107006607	True	NM_005246,NM_001962	chr5,chr5	+,-	FER,EFNA5	1076915,39
chr4:177698325-177699884	chr4	+	177698749	177699894	True	NM_021928,NM_005429	chr4,chr4	+,-	SPCS3,VEGFC	-457723,14051
chr2:202471544-202472199	chr2	+	202471828	202472058	True	NM_001168216,NM_018571	chr2,chr2	-,+	ALS2CR11,STRADB	11901,-155499
chr11:122484807-122485130	chr11	+	122484935	122485088	True	NM_032873,NM_001098169	chr11,chr11	+,-	UBASH3B,BSX	41309,367344
chr7:76056134-76056529	chr7	+	76056379	76056501	True	NM_080744,NM_001110354	chr7,chr7	-,+	SRCRB4D,ZP3	-17367,-2159
chr8:75896620-75897023	chr8	+	75896703	75896965	True	NM_031461,NM_020647	chr8,chr8	+,-	CRISPLD1,JPH1	-46,-663141
chr1:187520445-187521616	chr1	+	187520743	187521495	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-871184,-722762
chr8:144660793-144661481	chr8	+	144660799	144661363	True	NM_145201,NM_001100878,NM_032862	chr8,chr8,chr8	-,-,+	NAPRT1,C8orf73,TIGD5	-286,-5871,18710
chr16:85212129-85212381	chr16	+	85212132	85212284	True	NR_033984,NM_198491	chr16,chr16	+,-	LOC400548,FAM92B	-41428,-66018
chr8:143850767-143851259	chr8	+	143850989	143851273	True	NM_177477,NM_177476,NM_177457,NM_177458,NM_016647,NM_023946	chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,+,-	LYNX1,LYNX1,LYNX1,LYNX1,C8orf55,LYNX1	7521,7214,8417,23,-42419,8416
chr17:42834350-42834598	chr17	+	42834383	42834587	True	NM_144609,NM_002390	chr17,chr17	-,+	CCDC43,ADAM11	-67218,1980
chr1:151169631-151169914	chr1	+	151169644	151169726	True	NM_001135637,NM_001135636,NM_003557,NM_005997,NM_001135638	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	PIP5K1A,PIP5K1A,PIP5K1A,VPS72,PIP5K1A	1294,1294,1294,-7004,1294
chrX:118925290-118925507	chrX	+	118925365	118925443	True	NM_001000,NR_002584,NM_001105576	chrX,chrX,chrX	-,-,+	RPL39,SNORA69,ANKRD58	213,-3918,-32840
chrX:70503488-70503846	chrX	+	70503550	70503858	True	NM_007363,NM_001171162,NM_001145410,NM_001145409,NM_001145408	chrX,chrX,chrX,chrX,chrX	+,-,+,+,+	NONO,ZMYM3,NONO,NONO,NONO	-559,-28503,-559,-559,-559
chr6:43213372-43214368	chr6	+	43213411	43214211	True	NM_032538,NM_199184	chr6,chr6	+,-	TTBK1,C6orf108	-2243,-16200
chr20:10017215-10018203	chr20	+	10017639	10018239	True	NM_198798,NM_177990,NM_022096	chr20,chr20,chr20	+,-,+	ANKRD5,PAK7,ANKRD5	-1993,-197952,-1993
chr21:33453410-33454633	chr21	+	33453575	33454612	True	NR_024352,NR_038033	chr21,chr21	+,-	NCRNA00159,NCRNA00159	-997,4055
chr9:131310719-131311315	chr9	+	131310815	131311263	True	NM_001195532,NM_001130438,NM_052844,NM_003127	chr9,chr9,chr9,chr9	+,+,-,+	SPTAN1,SPTAN1,WDR34,SPTAN1	3573,3573,107916,3573
chr19:51017415-51018216	chr19	+	51017425	51018203	True	NM_138334,NM_001024656,NM_001114598,NM_206538	chr19,chr19,chr19,chr19	-,-,-,+	JOSD2,ASPDH,ASPDH,C19orf63	-3080,-24,-283,-37740
chr14:55867544-55868723	chr14	+	55867811	55868714	True	NM_014924,NM_152231	chr14,chr14	-,+	ATG14,FBXO34	9912,-128990
chr19:46298723-46299302	chr19	+	46298845	46299027	True	NM_004943,NM_004497	chr19,chr19	-,+	DMWD,FOXA3	-2785,68490
chr11:44130011-44131952	chr11	+	44130028	44131966	True	NM_021926,NM_000401	chr11,chr11	-,+	ALX4,EXT2	199800,-12332
chr7:99818293-99818690	chr7	+	99818324	99818628	True	NM_024070,NM_152742	chr7,chr7	+,-	PVRIG,GPC2	-1504,-43334
chr15:79383103-79383419	chr15	+	79383143	79383395	True	NM_001145648,NR_029705,NM_002891	chr15,chr15,chr15	-,+,-	RASGRF1,MIR184,RASGRF1	58,118734,58
chr4:9654546-9656449	chr4	+	9654563	9655765	True	NR_031688,NM_000798	chr4,chr4	-,+	MIR548I2,DRD5	-96626,127492
chr1:17091126-17091676	chr1	+	17091230	17091724	True	NR_002729,NR_037446	chr1,chr1	-,+	MST1P9,MIR3675	-255,-83538
chr1:17091126-17091676	chr1	-	234953212	234953492	False	NM_182972,NR_033927	chr1,chr1	-,+	IRF2BP2,NCRNA00184	-207941,-188210
chr14:20800284-20801001	chr14	+	20800396	20801044	True	NM_182851,NM_182852,NM_001042618,NM_182849,NR_003693,NM_021178	chr14,chr14,chr14,chr14,chr14,chr14	-,-,+,-,-,-	CCNB1IP1,CCNB1IP1,PARP2,CCNB1IP1,SNORD126,CCNB1IP1	-2860,-2863,10728,463,-5698,463
chr2:154791646-154793324	chr2	+	154791711	154793148	True	NM_019845,NM_052917	chr2,chr2	-,+	RPRM,GALNT13	-456389,-63336
chr7:128114249-128114663	chr7	+	128114361	128114567	True	NM_183243,NM_018396	chr7,chr7	-,+	IMPDH1,METTL2B	-64325,2215
chr7:128114249-128114663	chr17	+	60498955	60499025	False	NR_027486,NM_181725	chr17,chr17	-,+	TBC1D3P2,METTL2A	-145939,2220
chr2:114644205-114645240	chr2	+	114644295	114645191	True	NM_005721,NR_034130	chr2,chr2	+,-	ACTR3,LOC100499194	2345,92420
chr17:70118078-70118314	chr17	+	70118107	70118345	True	NM_000346,NR_036488	chr17,chr17	+,-	SOX9,LOC100499467	-997,470648
chr16:75604458-75605732	chr16	+	75604457	75605486	True	NM_001077419,NM_007285	chr16,chr16	-,+	TMEM231,GABARAPL2	-14287,-4259
chr11:104936902-104938030	chr11	+	104937133	104938068	True	NM_001077244,NM_052889	chr11,chr11	+,-	GRIA4,CARD16	542731,-21082
chr2:69860655-69861021	chr2	+	69860744	69861022	True	NM_014911,NM_001153	chr2,chr2	-,+	AAK1,ANXA4	10005,108104
chr2:132288234-132288560	chr2	+	132288293	132288429	True	NM_001085365,NM_138770	chr2,chr2	-,+	MZT2A,CCDC74A	-38229,-2852
chr2:132288234-132288560	chr2	-	130899676	130899985	False	NM_207310,NR_033903	chr2,chr2	-,+	CCDC74B,LOC285103	2933,-12531
chr3:128966942-128967567	chr3	+	128967021	128967582	True	NM_003418,NM_016128	chr3,chr3	-,+	CNBP,COPG	-64211,870
chr10:7707706-7708277	chr10	+	7707753	7708325	True	NM_002216,NM_001001851,NM_030569	chr10,chr10,chr10	+,-,-	ITIH2,ITIH5,ITIH5	36910,686,686
chr1:27817911-27818428	chr1	+	27818279	27818425	True	NM_005281,NM_001201404,NM_006990	chr1,chr1,chr1	+,-,-	GPR3,WASF2,WASF2	-99187,-1601,-1601
chr13:113242681-113242914	chr13	+	113242723	113242876	True	NM_207440,NM_006322	chr13,chr13	+,-	C13orf35,TUBGCP3	58481,-242
chr7:128390204-128391702	chr7	+	128390303	128391473	True	NM_001708,NM_001219	chr7,chr7	-,+	OPN1SW,CALU	24421,-11015
chr17:38375083-38375472	chr17	+	38375104	38375478	True	NM_133264,NM_021724	chr17,chr17	+,-	WIPF2,NR1D1	95,-118131
chrX:70941818-70942647	chrX	+	70941889	70942443	True	NR_001568,NR_034005,NM_001145140,NM_001145139	chrX,chrX,chrX,chrX	-,+,-,-	BCYRN1,FLJ46446,CXorf49,CXorf49B	6569,-24894,-3754,-3754
chrX:70941818-70942647	chrX	-	70978783	70979385	False	NR_001568,NM_001145140,NM_001145139	chrX,chrX,chrX	-,+,+	BCYRN1,CXorf49,CXorf49B	-29821,3754,3754
chr7:65968272-65968540	chr7	+	65968297	65968369	True	NM_001167961,NR_002933	chr7,chr7	+,-	KCTD7,LOC493754	125498,75179
chr19:52837688-52838103	chr19	+	52837826	52837959	True	NM_001161427,NM_001161426,NM_001161425,NM_001102657	chr19,chr19,chr19,chr19	+,+,+,-	ZNF610,ZNF610,ZNF610,ZNF836	1538,1538,1538,-162930
chr2:61764174-61764568	chr2	+	61764257	61764562	True	NM_152392,NM_003400	chr2,chr2	+,-	AHSA2,XPO1	-359753,906
chr3:116163856-116164289	chr3	+	116163961	116164215	True	NR_015391,NM_002338	chr3,chr3	+,-	NCRNA00295,LSAMP	264419,220
chr4:88733103-88734273	chr4	+	88733102	88734322	True	NM_001184694,NM_004684	chr4,chr4	+,-	MEPE,SPARCL1	8240,-282447
chr5:145581385-145582839	chr5	+	145581953	145582799	True	NM_020117,NM_018989	chr5,chr5	-,+	LARS,RBM27	-19659,363
chr1:156021627-156022208	chr1	+	156021709	156022098	True	NM_020131,NM_014017,NM_001145264,NM_020387	chr1,chr1,chr1,chr1	-,+,+,+	UBQLN4,LAMTOR2,LAMTOR2,RAB25	1477,2418,2418,8867
chr19:49575291-49575502	chr19	+	49575340	49575448	True	NM_031886,NM_006179,NM_003089	chr19,chr19,chr19	-,-,+	KCNA7,NTF4,SNRNP70	800,-8216,13016
chr1:148207583-148208302	chr1	+	148207746	148208316	True	NM_001164262,NM_001170755,NM_001164261	chr1,chr1,chr1	-,+,-	PPIAL4F,NBPF15,PPIAL4D	-5210,349871,-5210
chr1:148207583-148208302	chr1	-	148638715	148638795	False	NM_001164262,NM_001144032	chr1,chr1	-,+	PPIAL4F,PPIAL4E	-436179,5215
chr1:148207583-148208302	chr1	-	148800730	148800810	False	NM_001164262,NM_001164261	chr1,chr1	+,+	PPIAL4F,PPIAL4D	5204,5204
chr9:46281067-46281772	chr4	-	3536445	3536505	False	NM_002337,NM_173660	chr4,chr4	-,+	LRPAP1,DOK7	-2221,-71463
chr9:46281067-46281772	chr9	+	46281167	46281429	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2650437,406136
chr9:46281067-46281772	chr9	+	67690197	67690403	False	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	103836,236357
chr9:46281067-46281772	chr9	+	44769010	44769239	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	220996,-1138280
chr9:46281067-46281772	chr9	-	45101797	45102059	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-111612,-1471067
chr2:99920354-99921891	chr2	+	99920960	99921394	True	NM_174898,NM_015904	chr2,chr2	-,+	LYG1,EIF5B	-3321,32439
chrX:80470670-80471356	chrX	+	80470805	80471346	True	NM_003022,NM_030763	chrX,chrX	+,-	SH3BGRL,HMGN5	-13565,-13364
chr22:32591738-32592502	chr22	+	32591762	32592517	True	NM_001098527,NR_033411,NM_006605,NM_001159546,NM_001159545	chr22,chr22,chr22,chr22,chr22	-,+,-,-,-	RFPL2,SLC5A1,RFPL2,RFPL2,RFPL2	7004,-136669,-2296,6077,8258
chr19:13228526-13228942	chr19	+	13228656	13228847	True	NM_017722,NM_001136035,NM_001142554,NM_052876	chr19,chr19,chr19,chr19	-,-,-,+	TRMT1,TRMT1,TRMT1,NACC1	-1193,-1093,-1193,261
chrX:135584727-135586119	chrX	+	135584742	135585971	True	NM_001163280,NM_001173516,NM_014500	chrX,chrX,chrX	+,-,+	HTATSF1,MAP7D3,HTATSF1	-5558,-246101,-5125
chr14:64317800-64318520	chr14	+	64318132	64318453	True	NM_182914,NM_015180,NM_030791	chr14,chr14,chr14	+,+,-	SYNE2,SYNE2,SGPP1	1229,1229,-123376
chr14:21505535-21506762	chr14	+	21505601	21506744	True	NM_001012264,NM_173846,NM_032572	chr14,chr14,chr14	-,+,+	RNASE13,TPPP2,RNASE7	-2657,-7311,3640
chr9:79785924-79787298	chr9	+	79786102	79787294	True	NM_001018037,NM_015186,NM_033305,NR_026668,NM_001018038	chr9,chr9,chr9,chr9,chr9	+,+,+,-,+	VPS13A,VPS13A,VPS13A,LOC100286938,VPS13A	5066,5066,5066,5597,5066
chr7:87493280-87494389	chr7	+	87493377	87494413	True	NM_006716,NM_018843	chr7,chr7	+,-	DBF4,SLC25A40	11130,11329
chrX:45049735-45050240	chrX	+	45049806	45050221	True	NM_024689,NM_176819,NM_021140	chrX,chrX,chrX	-,-,+	CXorf36,CXorf36,KDM6A	9976,9976,-317441
chr11:117668441-117670240	chr11	+	117668504	117670239	True	NM_020693,NM_001558	chr11,chr11	-,+	DSCAML1,IL10RA	-528,186866
chr5:95169402-95169955	chr5	+	95169478	95170003	True	NR_026936,NM_002064	chr5,chr5	+,-	C5orf27,GLRX	17932,-10901
chr7:148959888-148960110	chr7	+	148959892	148959989	True	NM_001001661,NM_001195220	chr7,chr7	-,+	ZNF425,ZNF783	-136454,-686
chr20:50808712-50809064	chr20	+	50808715	50809061	True	NM_173485,NM_018197,NM_199426,NM_022088,NM_199427	chr20,chr20,chr20,chr20,chr20	+,-,-,-,-	TSHZ2,ZFP64,ZFP64,ZFP64,ZFP64	779884,-191,-191,-191,-191
chr16:24267450-24267699	chr16	+	24267496	24267704	True	NM_006539,NM_033266	chr16,chr16	+,-	CACNG3,ERN2	-673,-542675
chr11:32915457-32915699	chr11	+	32915461	32915717	True	NM_001008391,NM_001076786	chr11,chr11	-,+	CCDC73,QSER1	-99274,-720
chr7:37015306-37016621	chr7	+	37015518	37016600	True	NM_001039459,NM_130442,NM_018685	chr7,chr7,chr7	-,-,+	ELMO1,ELMO1,ANLN	8115,9171,-586148
chr7:19763933-19765322	chr7	+	19763934	19765226	True	NM_001002926,NM_002214	chr7,chr7	-,+	TWISTNB,ITGB8	-15274,605498
chr1:16328227-16329038	chr1	+	16328285	16329087	True	NM_014424,NM_178840	chr1,chr1	-,+	HSPB7,C1orf64	16248,1643
chr7:47294209-47294500	chr7	+	47294298	47294520	True	NM_001123065,NM_022748	chr7,chr7	+,-	C7orf65,TNS3	400321,327272
chr1:172634117-172634900	chr1	+	172634200	172634870	True	NM_153747,NM_000639	chr1,chr1	-,+	PIGC,FASLG	-220970,-6068
chr22:42828413-42829132	chr22	+	42828658	42829082	True	NR_027786,NM_145912	chr22,chr22	+,-	SERHL,NFAM1	67502,-257
chr19:46142217-46142522	chr19	+	46142265	46142431	True	NR_029886,NM_012155,NM_001193268,NM_001193269,NM_000164,NR_034098	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,+,-	MIR330,EML2,EML2,EML2,GIPR,EML2	4,294,6394,4604,29070,294
chr6:90538638-90539028	chr6	+	90538904	90539004	True	NM_001137667,NM_014611,NM_001137668,NM_012115	chr6,chr6,chr6,chr6	+,-,+,+	CASP8AP2,MDN1,CASP8AP2,CASP8AP2	614,-9462,614,614
chr5:56248288-56248569	chr5	+	56248387	56248613	True	NM_001171990,NM_152622	chr5,chr5	+,-	C5orf35,MIER3	-43351,-433
chr10:93169938-93170185	chr10	+	93170076	93170234	True	NM_182765,NM_173497,NR_024467	chr10,chr10,chr10	+,+,-	HECTD2,HECTD2,LOC100188947	-31,-31,201033
chr9:139927845-139928539	chr9	+	139928339	139928451	True	NM_004479,NM_001606,NM_212533,NM_207511	chr9,chr9,chr9,chr9	-,-,-,+	FUT7,ABCA2,ABCA2,C9orf139	-1047,-5599,-4965,-6474
chr7:16625358-16626169	chr7	+	16625573	16626129	True	NM_001195280,NM_020319	chr7,chr7	+,-	LOC100506049,ANKMY2	-59120,59363
chr17:48245003-48245437	chr17	+	48245072	48245358	True	NR_024192,NR_024193,NM_001135697,NM_000023	chr17,chr17,chr17,chr17	-,-,+,+	HILS1,HILS1,SGCA,SGCA	4529,4529,-1757,-1757
chr1:160035802-160037759	chr1	+	160035877	160037497	True	NM_002241,NM_004983	chr1,chr1	-,+	KCNJ10,KCNJ9	2604,13862
chr2:113006158-113006491	chr2	+	113006277	113006450	True	NM_032494,NM_198581	chr2,chr2	-,+	ZC3H8,ZC3H6	6269,26727
chr12:43947601-43948085	chr12	+	43947601	43947749	True	NM_025003,NM_001114182	chr12,chr12	-,+	ADAMTS20,IRAK4	-1877,204997
chr1:32279761-32280658	chr1	+	32279866	32280592	True	NM_144569,NM_001525	chr1,chr1	-,+	SPOCD1,HCRTR1	1038,-196616
chr9:104159078-104160432	chr9	+	104159788	104160473	True	NM_197977,NM_003452,NM_019051	chr9,chr9,chr9	+,+,-	ZNF189,ZNF189,MRPL50	689,689,499
chr5:118603104-118603683	chr5	+	118603109	118603677	True	NM_173666,NM_001077654	chr5,chr5	-,+	DTWD2,TNFAIP8	-278869,740
chr17:7745350-7745580	chr17	+	7745360	7745526	True	NM_032356,NM_001080424	chr17,chr17	-,+	LSMD1,KDM6B	15696,-2176
chr2:238964021-238965832	chr2	+	238964194	238965835	True	NM_016510,NM_030768	chr2,chr2	+,-	SCLY,ILKAP	3729,146539
chr1:171618857-171619077	chr1	+	171618950	171619130	True	NM_001007239,NM_000261	chr1,chr1	+,-	METTL13,MYOC	131630,2699
chr1:223890385-223891799	chr1	+	223890444	223891699	True	NM_001143962,NM_001146068,NM_001748	chr1,chr1,chr1	-,+,+	CAPN8,CAPN2,CAPN2	-37008,-1208,8419
chr2:233636018-233636409	chr2	+	233636018	233636450	True	NM_001172416,NM_001172417,NM_015575,NM_002242	chr2,chr2,chr2,chr2	-,-,+,-	KCNJ13,KCNJ13,GIGYF2,KCNJ13	4885,4885,-74055,4885
chr19:36910434-36912131	chr19	+	36910762	36911642	True	NM_133466,NR_033748	chr19,chr19	-,+	ZFP82,LOC644189	-1212,796
chr10:6390104-6391424	chr10	+	6390358	6391098	True	NM_004566,NM_006257	chr10,chr10	+,-	PFKFB3,PRKCQ	-145569,231196
chr22:30474449-30474895	chr22	+	30474717	30474943	True	NM_152510,NM_002309	chr22,chr22	+,-	HORMAD2,LIF	1509,167903
chr6:2989526-2989803	chr6	+	2989535	2989848	True	NR_026855,NR_026856,NM_004568	chr6,chr6,chr6	+,+,-	DKFZP686I15217,DKFZP686I15217,SERPINB6	-1385,-1385,-17136
chr20:18117860-18118152	chr20	+	18117981	18118183	True	NR_028402,NM_020536,NM_001164811,NM_021220	chr20,chr20,chr20,chr20	+,+,+,-	CSRP2BP,CSRP2BP,PET117,OVOL2	7559,4684,315,-79460
chr3:133295284-133295983	chr3	+	133295322	133295686	True	NM_001134423,NM_001134422,NM_017548,NM_007027	chr3,chr3,chr3,chr3	+,+,+,-	CDV3,CDV3,CDV3,TOPBP1	-2079,-2946,-2946,85109
chr20:2820649-2820862	chr20	+	2820653	2820865	True	NM_080413,NM_022760,NM_022575	chr20,chr20,chr20	+,-,+	VPS16,FAM113A,VPS16	507,517,507
chr2:215885816-215886108	chr2	+	215885906	215886054	True	NM_004044,NM_015657	chr2,chr2	+,-	ATIC,ABCA12	290624,10812
chr12:120971732-120972075	chr12	+	120971822	120971980	True	NM_014868,NM_032314	chr12,chr12	+,-	RNF10,COQ5	151,-4858
chr8:79716008-79716608	chr8	+	79716016	79716626	True	NM_001199886,NM_001199887,NM_016010,NM_000880,NM_001199888	chr8,chr8,chr8,chr8,chr8	-,-,+,-,-	IL7,IL7,FAM164A,IL7,IL7	1182,1182,-137792,1182,1182
chr12:133264671-133266027	chr12	+	133265913	133266064	True	NM_018663,NM_006231	chr12,chr12	+,-	PXMP2,POLE	-1772,-1968
chr20:35201230-35201532	chr20	+	35201254	35201554	True	NM_021809,NM_001199535,NM_001199513,NM_001199514,NM_001199515,NM_032214	chr20,chr20,chr20,chr20,chr20,chr20	+,+,+,+,+,-	TGIF2,TGIF2-C20ORF24,TGIF2,TGIF2,TGIF2,SLA2	455,1402,321,321,1402,73054
chr3:52319897-52320222	chr3	+	52320036	52320253	True	NM_001144951,NR_029677,NM_025222,NR_026701,NR_026700,NR_026702,NM_145262,NR_026699	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,-,-,+,+,+,+,+	GLYCTK,MIR135A1,WDR82,GLYCTK,GLYCTK,GLYCTK,GLYCTK,GLYCTK	1582,8126,-7377,1582,1582,1582,1582,1582
chr9:123880179-123880747	chr9	+	123880354	123880788	True	NM_007018,NM_001735	chr9,chr9	+,-	CEP110,C5	-29842,-67800
chr17:15902539-15902740	chr17	+	15902592	15902662	True	NM_001042698,NR_037985,NM_017775,NM_001042697	chr17,chr17,chr17,chr17	-,+,+,-	ZSWIM7,TTC19,TTC19,ZSWIM7	402,31,31,402
chr5:88398852-88399703	chr5	+	88399040	88399738	True	NM_001193347,NM_006467	chr5,chr5	-,+	MEF2C,POLR3G	-199118,1370942
chr9:130513418-130513831	chr9	+	130513523	130513859	True	NM_001142533,NM_001142534,NR_036055	chr9,chr9,chr9	-,-,+	SH2D3C,SH2D3C,MIR2861	3774,3752,34337
chr1:207994460-207995339	chr1	+	207994676	207995354	True	NR_029518,NR_026817	chr1,chr1	-,+	MIR29B2,LOC148696	-18808,-3003
chr19:44143325-44143588	chr19	+	44143407	44143583	True	NM_001145641,NM_145296	chr19,chr19	+,-	SRRM5,CADM4	-27205,458
chrX:67871389-67871780	chrX	+	67871396	67871706	True	NM_014725,NM_002547,NM_001142503	chrX,chrX,chrX	+,-,+	STARD8,OPHN1,STARD8	-3936,-218097,-3936
chr13:109887824-109889127	chr13	+	109887953	109888795	True	NM_003749,NM_001198950	chr13,chr13	-,+	IRS2,MYO16	550169,-606434
chr6:41191282-41192700	chr6	+	41191355	41192576	True	NM_198153,NR_027256	chr6,chr6	+,-	TREML4,TREML3	3485,-5670
chr5:179636665-179637024	chr5	+	179636669	179636851	True	NM_015455,NM_175062	chr5,chr5	+,-	CNOT6,RASGEF1C	284565,-539
chr16:50323297-50323872	chr16	+	50323304	50323834	True	NM_001114,NM_001173984	chr16,chr16	+,-	ADCY7,BRD7	-1532,79061
chr8:30888799-30889893	chr8	+	30889000	30889615	True	NM_013357,NM_000553,NM_001015508	chr8,chr8,chr8	-,+,-	PURG,WRN,PURG	752,1162,1666
chr15:78931799-78932765	chr15	+	78931992	78932574	True	NM_000745,NM_000750	chr15,chr15	+,-	CHRNA5,CHRNB4	-74192,1063
chr19:45873859-45874306	chr19	+	45873866	45874269	True	NM_001130867,NM_177417,NM_000400	chr19,chr19,chr19	-,+,-	ERCC2,KLC3,ERCC2	-21,-29919,-21
chr7:158500277-158501518	chr7	+	158500336	158501573	True	NM_017760,NM_018051	chr7,chr7	-,+	NCAPG2,WDR60	-2816,147695
chr3:69145845-69146797	chr3	+	69146061	69146720	True	NM_006407,NM_198195	chr3,chr3	+,-	ARL6IP5,UBA3	-12026,-16537
chr4:99582984-99584902	chr4	+	99583040	99584553	True	NM_005723,NM_015143	chr4,chr4	-,+	TSPAN5,METAP1	-3228,332234
chr2:43806262-43807254	chr2	+	43806338	43807026	True	NM_001083953,NM_172069	chr2,chr2	-,+	THADA,PLEKHH2	16137,57412
chr17:8022474-8023277	chr17	+	8022542	8023321	True	NM_001165967,NR_036201,NM_021628,NM_001165960,NM_032580	chr17,chr17,chr17,chr17,chr17	-,+,-,-,-	HES7,MIR4314,ALOXE3,ALOXE3,HES7	4146,-31219,-682,-308,4146
chr1:109507687-109508296	chr1	+	109507716	109508172	True	NM_013296,NM_015127,NM_001048210	chr1,chr1,chr1	+,-,-	GPSM2,CLCC1,CLCC1	-88164,-1605,-1605
chrX:108780451-108780657	chrX	+	108780542	108780704	True	NM_018698,NM_001522	chrX,chrX	+,-	NXT2,GUCY2F	-1591,-55257
chrX:150732714-150734188	chrX	+	150732790	150733895	True	NR_029973,NM_173493	chrX,chrX	-,+	MIR452,PASD1	394339,-835
chr7:116312452-116312955	chr7	+	116312589	116312991	True	NM_000245,NR_002330,NM_001127500	chr7,chr7,chr7	+,-,+	MET,ST7OT1,MET	-181,281447,-181
chr2:6122896-6123154	chr2	+	6122966	6123164	True	NM_207315,NR_026833	chr2,chr2	-,+	CMPK2,LOC400940	882822,-908
chr20:18443359-18445304	chr20	+	18444017	18445267	True	NR_036160,NM_006466,NM_001099407	chr20,chr20,chr20	+,+,-	MIR3192,POLR3F,C20orf12	5991,2765,2619
chr20:2627882-2629429	chr20	+	2628133	2628764	True	NR_004399,NR_002981,NR_027700,NR_003078,NM_006899,NM_006392,NR_031699,NR_002739,NR_002738	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,+,+,+,-,+,+,+,+	SNORD86,SNORA51,NOP56,SNORD110,IDH3B,NOP56,MIR1292,SNORD56,SNORD57	7978,6948,4489,6093,16130,4489,4658,8505,8820
chr19:46235229-46235720	chr19	+	46235419	46235668	True	NM_001080469,NM_017659	chr19,chr19	-,+	FBXO46,QPCTL	-1268,-39738
chr1:182569110-182569397	chr1	+	182569171	182569436	True	NR_036490,NM_002928	chr1,chr1	+,-	LOC284648,RGS16	14838,4162
chr14:74005401-74006322	chr14	+	74005769	74006311	True	NM_203309,NM_001037161	chr14,chr14	-,+	HEATR4,ACOT1	19390,-1898
chr14:74005401-74006322	chr14	+	74037994	74038044	False	NM_203309,NM_006821	chr14,chr14	-,+	HEATR4,ACOT2	-12343,-2273
chr21:35443033-35443572	chr21	+	35443157	35443355	True	NM_032476,NM_006933,NM_001697	chr21,chr21,chr21	+,+,-	MRPS6,SLC5A3,ATP5O	2467,2514,-154999
chr4:189028016-189028259	chr4	+	189028040	189028136	True	NM_173553,NM_178556	chr4,chr4	-,+	TRIML2,TRIML1	-1632,32461
chr9:139939345-139939660	chr9	+	139939389	139939697	True	NM_207511,NM_001246,NM_203468,NM_015392	chr9,chr9,chr9,chr9	+,-,-,-	C9orf139,ENTPD2,ENTPD2,NPDC1	-17524,8858,8858,1029
chr11:30248824-30250628	chr11	+	30248845	30250253	True	NM_002233,NM_001018080,NM_000510	chr11,chr11,chr11	-,+,+	KCNA4,FSHB,FSHB	-210268,2309,2309
chr1:151370643-151371193	chr1	+	151370774	151370874	True	NM_003944,NM_002796	chr1,chr1	-,+	SELENBP1,PSMB4	-25610,1166
chr8:1775206-1775633	chr8	+	1775371	1775433	True	NM_014629,NR_033895	chr8,chr8	+,-	ARHGEF10,LOC286083	-3273,-524544
chr17:264286-266138	chr17	+	264333	265913	True	NM_182705,NM_001013672	chr17,chr17	-,+	FAM101B,C17orf97	29868,-4267
chr2:213989245-213991134	chr2	+	213989247	213991151	True	NM_016260,NM_001025436	chr2,chr2	-,+	IKZF2,SPAG16	23962,157964
chr17:56298695-56299617	chr17	+	56299096	56299587	True	NM_001165927,NM_017777,NM_001160102	chr17,chr17,chr17	-,-,+	MKS1,MKS1,LPO	-2130,-2430,16199
chr11:128563440-128563644	chr11	+	128563440	128563684	True	NM_001167681,NM_002017,NM_001143820	chr11,chr11,chr11	+,+,-	FLI1,FLI1,ETS1	126,128,-105987
chr12:123450682-123450924	chr12	+	123450691	123450959	True	NM_203444,NM_019625,NM_019624,NM_024623	chr12,chr12,chr12,chr12	-,-,-,+	ABCB9,ABCB9,ABCB9,OGFOD2	8843,147,147,8394
chr17:14206814-14207191	chr17	+	14206860	14207062	True	NR_026880,NM_006041,NM_001007530	chr17,chr17,chr17	+,+,-	MGC12916,HS3ST3B1,CDRT15	1,-2405,-66710
chr16:14925884-14926615	chr16	+	14925965	14926336	True	NR_023387,NM_014287	chr16,chr16	-,+	ABCC6P2,NOMO1	-7406,1306
chr16:14925884-14926615	chr16	+	16324799	16324849	False	NM_001171,NM_001079528,NM_001004067	chr16,chr16,chr16	-,-,+	ABCC6,ABCC6,NOMO3	-7471,-7471,1539
chr12:27300205-27300922	chr12	+	27300335	27300949	True	NM_001080406,NM_015000	chr12,chr12	-,+	C12orf71,STK38L	-64880,96128
chr12:27300205-27300922	chr12	+	27809973	27810023	False	NM_001146221,NM_001029874	chr12,chr12	-,+	LOC100287284,REP15	114236,39404
chr9:139379164-139379496	chr9	+	139379188	139379496	True	NM_152571,NM_014866	chr9,chr9	+,-	C9orf163,SEC16A	-1292,-1681
chr3:107814448-107816028	chr3	+	107814691	107815881	True	NM_007072,NM_198793,NM_001777	chr3,chr3,chr3	+,-,-	HHLA2,CD47,CD47	205450,-4756,-4756
chr1:26735253-26735736	chr1	+	26735259	26735519	True	NM_173574,NM_024674	chr1,chr1	-,+	ZNF683,LIN28A	-35993,1749
chr2:38205268-38206892	chr2	+	38205511	38206911	True	NM_000104,NM_144713	chr2,chr2	-,+	CYP1B1,FAM82A1	96472,-27971
chr7:917782-918376	chr7	+	917877	918181	True	NM_015949,NM_006869	chr7,chr7	+,-	GET4,ADAP1	-1737,76158
chr18:580760-582731	chr18	+	580896	582642	True	NM_004066,NM_001012716	chr18,chr18	+,-	CETN1,C18orf56	-578,75748
chr12:56649460-56649675	chr12	+	56649475	56649641	True	NM_173595,NM_144576	chr12,chr12	-,+	ANKRD52,COQ10A	2552,11000
chr1:40238159-40239174	chr1	+	40238163	40239045	True	NM_022120,NM_001195007	chr1,chr1	-,+	OXCT2,PPIE	-1143,-33697
chr1:40238159-40239174	chr1	-	39978510	39979392	False	NR_003929,NM_181809	chr1,chr1	-,+	PPIEL,BMP8A	46028,-21243
chr11:117100480-117102097	chr11	+	117100899	117102087	True	NM_004716,NM_207343,NM_001077239	chr11,chr11,chr11	-,+,+	PCSK7,RNF214,RNF214	774,1316,1364
chr12:57623992-57624528	chr12	+	57624201	57624575	True	NM_005412,NM_020142,NR_029415,NR_029416,NR_029417,NM_001166358,NM_001166359,NM_001166356,NM_001166357	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,-,+,+,+,+,+,+,+	SHMT2,NDUFA4L2,SHMT2,SHMT2,SHMT2,SHMT2,SHMT2,SHMT2,SHMT2	-896,9950,-141,-424,-896,-424,-141,-896,-109
chr11:1968284-1968497	chr11	+	1968422	1968536	True	NR_024471,NM_021134	chr11,chr11	-,+	LOC100133545,MRPL23	42664,21
chr1:22138640-22139505	chr1	+	22138751	22139484	True	NM_001032730,NM_001013693	chr1,chr1	-,+	USP48,LDLRAD2	-29063,-51
chr2:47405103-47407079	chr2	+	47405148	47406698	True	NM_001743,NM_002354	chr2,chr2	-,+	CALM2,EPCAM	-1408,189588
chr12:32831733-32831973	chr12	+	32831851	32831967	True	NM_001040436,NM_012062,NM_005690,NM_012063	chr12,chr12,chr12,chr12	-,+,+,+	YARS2,DNM1L,DNM1L,DNM1L	76970,169,169,169
chr10:38521124-38522436	chr10	+	38521198	38522436	True	NR_027269,NR_024524	chr10,chr10	-,+	SEPT7L,LOC100129055	169394,-56658
chr10:38521124-38522436	chr1	-	242526469	242527446	False	NM_006027,NM_001195811	chr1,chr1	+,-	EXO1,PLD5	-514487,85400
chr13:103454174-103455806	chr13	+	103454250	103455325	True	NM_001159596,NM_024089,NM_017693,NM_001204425	chr13,chr13,chr13,chr13	+,-,+,+	BIVM,KDELC1,BIVM,BIVM-ERCC5	-2909,-2846,-2909,4170
chr1:234041825-234043765	chr1	+	234042011	234043134	True	NM_173508,NM_005646	chr1,chr1	+,-	SLC35F3,TARBP1	-1390,571765
chr17:79886161-79886385	chr17	+	79886236	79886296	True	NM_002359,NM_006907,NM_032711,NM_153824,NR_015454	chr17,chr17,chr17,chr17,chr17	-,-,-,-,+	MAFG,PYCR1,MAFG,PYCR1,LOC92659	-648,8722,-4828,8722,-582
chr19:9878531-9878963	chr19	+	9878677	9879005	True	NM_001048241,NM_001077624	chr19,chr19	+,-	UBL5,ZNF846	59562,455
chr6:74080021-74081151	chr6	+	74080043	74080994	True	NM_001080507,NM_001017361	chr6,chr6	-,+	OOEP,C6orf221	-528,-7706
chr17:41148840-41149558	chr17	+	41149164	41149590	True	NM_000988,NM_001142654,NM_005533	chr17,chr17,chr17	+,-,+	RPL27,AARSD1,IFI35	855,-16619,9151
chr19:47137800-47138039	chr19	+	47137850	47137944	True	NM_033258,NM_000960,NM_005184	chr19,chr19,chr19	-,-,+	GNG8,PTGIR,CALM3	45,-9496,-33389
chr1:226737544-226737793	chr1	+	226737594	226737672	True	NM_001618,NM_001003665	chr1,chr1	-,+	PARP1,C1orf95	-141793,-1144
chr6:108397227-108397941	chr6	+	108397226	108397885	True	NM_003269,NM_014028	chr6,chr6	+,-	NR2E1,OSTM1	89329,-1285
chr12:94847594-94848151	chr12	+	94847890	94848154	True	NM_001042399,NM_016122,NR_027035	chr12,chr12,chr12	-,-,+	CCDC41,CCDC41,LOC144486	5660,5660,5624
chr1:156162811-156163340	chr1	+	156162875	156163077	True	NM_014655,NM_198406	chr1,chr1	+,-	SLC25A44,PAQR6	652,54773
chrX:100854411-100854688	chrX	+	100854417	100854619	True	NM_001009584,NM_016607	chrX,chrX	-,+	ARMCX6,ARMCX3	18422,23500
chrX:100854411-100854688	chrX	-	100869137	100869339	False	NM_019007,NM_001009584,NM_001184768,NR_033670,NM_016607,NM_177948,NM_177947,NR_033669	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,+,+,+,-	ARMCX6,ARMCX6,ARMCX6,ARMCX6,ARMCX3,ARMCX3,ARMCX3,ARMCX6	3702,3702,3702,3702,8780,9011,8780,3702
chr2:128176430-128177206	chr2	+	128176598	128177218	True	NM_000312,NM_006609	chr2,chr2	+,-	PROC,MAP3K2	-653,-75828
chr15:74831319-74832011	chr15	+	74831752	74832012	True	NM_006465,NM_201265	chr15,chr15	+,-	ARID3B,UBL7	1535,-78223
chr11:35077205-35077832	chr11	+	35077504	35077871	True	NM_015957,NM_001202557	chr11,chr11	-,+	APIP,CD44	-139565,82545
chrX:103317762-103318045	chrX	+	103317854	103318040	True	NR_003238,NM_001164416	chrX,chrX	-,+	H2BFXP,H2BFM	-352,-23389
chrX:103317762-103318045	chrX	-	103229963	103230149	False	NR_003238,NM_001002916	chrX,chrX	+,-	H2BFXP,H2BFWT	352,38157
chr8:38457358-38458249	chr8	+	38457546	38458086	True	NR_003129,NM_001146216	chr8,chr8	-,+	RNF5P1,TACC1	739,127617
chr5:43105290-43105856	chr5	+	43105409	43105869	True	NM_003432,NR_034127	chr5,chr5	+,-	ZNF131,LOC100132356	15772,-38336
chr12:52400004-52400493	chr12	+	52400064	52400450	True	NM_181711,NM_001013690	chr12,chr12	+,-	GRASP,FIGNL2	297,-174363
chr7:27495588-27496469	chr7	+	27495685	27496226	True	NM_001989,NM_152740	chr7,chr7	+,-	EVX1,HIBADH	-213573,206447
chr9:96793373-96794187	chr9	+	96793382	96794219	True	NM_177995,NM_021570	chr9,chr9	+,-	PTPDC1,BARX1	-357,-75774
chr12:6664179-6664522	chr12	+	6664243	6664499	True	NM_001039670,NM_001193457,NM_080730,NR_036467,NM_002046	chr12,chr12,chr12,chr12,chr12	-,-,-,-,+	IFFO1,IFFO1,IFFO1,IFFO1,GAPDH	800,800,800,800,-20637
chr12:28127478-28127973	chr12	+	28127485	28128019	True	NM_020782,NM_002820,NM_198966,NM_198964,NM_198965	chr12,chr12,chr12,chr12,chr12	+,-,-,-,-	KLHDC5,PTHLH,PTHLH,PTHLH,PTHLH	-194349,-2569,-4591,-4591,-2569
chr2:9770198-9770594	chr2	+	9770205	9770479	True	NM_006826,NM_001039613	chr2,chr2	-,+	YWHAQ,IAH1	677,-155586
chr19:53728694-53729944	chr19	+	53728830	53729795	True	NM_182609,NM_173856	chr19,chr19	-,+	ZNF677,VN1R2	28371,31749
chr8:37757197-37757931	chr8	+	37757246	37757862	True	NM_001002814,NM_025151,NM_032777	chr8,chr8,chr8	-,-,+	RAB11FIP1,RAB11FIP1,GPR124	-231,-231,-102896
chr2:61403377-61403678	chr2	+	61403377	61403691	True	NM_152392,NR_036496	chr2,chr2	+,-	AHSA2,LOC339803	863,-31267
chr7:156686498-156687097	chr7	+	156686502	156687146	True	NM_022458,NM_138400	chr7,chr7	-,+	LMBR1,NOM1	-600,55270
chr7:87254495-87256182	chr7	+	87254685	87255132	True	NM_000927,NM_001134406,NM_001134405,NM_138290	chr7,chr7,chr7,chr7	-,+,+,+	ABCB1,RUNDC3B,RUNDC3B,RUNDC3B	87558,2596,2596,2596
chr3:8778748-8780015	chr3	+	8778902	8779867	True	NM_033337,NM_000916,NM_001234	chr3,chr3,chr3	+,-,+	CAV3,OXTR,CAV3	-3467,31483,-3457
chrX:15286376-15286638	chrX	+	15286468	15286552	True	NM_024087,NM_203281,NM_001031739,NM_001168530,NM_001168531	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	ASB9,BMX,ASB9,ASB9,ASB9	1799,232347,1799,1799,2095
chr10:93368791-93370380	chr10	+	93369078	93370269	True	NM_025235,NR_024467	chr10,chr10	+,-	TNKS2,LOC100188947	187881,999
chr7:100844171-100844582	chr7	+	100844175	100844495	True	NM_178176,NM_006349	chr7,chr7	-,+	MOGAT3,ZNHIT1	-39,16489
chr6:26686353-26687257	chr6	+	26686499	26687300	True	NM_013375,NM_024639	chr6,chr6	+,-	ABT1,ZNF322A	-89371,-26536
chr12:4429275-4429616	chr12	+	4429532	4429640	True	NM_020638,NM_020375	chr12,chr12	-,+	FGF23,C12orf5	59304,718
chr8:90923712-90925398	chr8	+	90924510	90925369	True	NM_002485,NM_001126111	chr8,chr8	-,+	NBN,OSGIN2	71580,-9806
chr2:220043664-220044852	chr2	+	220043671	220044801	True	NM_001144889,NM_024293,NM_015680,NM_144712,NM_001144890	chr2,chr2,chr2,chr2,chr2	-,+,-,-,-	SLC23A3,FAM134A,CNPPD1,SLC23A3,SLC23A3	-8854,-783,-1969,-8854,-8854
chr17:43225751-43226027	chr17	+	43225826	43226076	True	NM_133373,NM_006460	chr17,chr17	-,+	PLCD3,HEXIM1	-15935,-1193
chrX:83004915-83005539	chrX	+	83005004	83005466	True	NM_021118,NM_014496	chrX,chrX	+,-	CYLC1,RPS6KA6	110703,437527
chrX:110503159-110503502	chrX	+	110503159	110503437	True	NM_001128173,NM_014289	chrX,chrX	+,-	PAK3,CAPN6	-136915,10401
chr11:66488274-66488793	chr11	+	66488415	66488691	True	NM_024650,NM_006946	chr11,chr11	+,-	C11orf80,SPTBN2	23515,229
chr7:100844582-100844788	chr7	+	100844621	100844683	True	NM_178176,NM_006349	chr7,chr7	-,+	MOGAT3,ZNHIT1	-319,16301
chr18:19336584-19337267	chr18	+	19336856	19337108	True	NM_138340,NM_020774	chr18,chr18	-,+	ABHD3,MIB1	-52090,-15375
chr1:67896547-67896755	chr1	+	67896603	67896773	True	NM_001018068,NM_001018069,NM_001559,NM_015640,NM_001018067	chr1,chr1,chr1,chr1,chr1	-,-,+,-,-	SERBP1,SERBP1,IL12RB2,SERBP1,SERBP1	-480,-480,-123607,-480,-480
chr17:73513757-73514676	chr17	+	73513770	73514672	True	NM_020753,NM_001142643,NM_004524,NM_001015002,NM_001031803,NM_207346	chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,+,+,+	CASKIN2,CASKIN2,LLGL2,LLGL2,LLGL2,TSEN54	-2143,-7812,7110,7110,7110,-1212
chr17:79480576-79480842	chr17	+	79480622	79480811	True	NM_001077182,NM_001199954,NM_001614,NR_037688	chr17,chr17,chr17,chr17	+,-,-,-	FSCN2,ACTG1,ACTG1,ACTG1	14605,-730,-730,-730
chr14:29243751-29243969	chr14	+	29243789	29244017	True	NM_002742,NR_026731,NR_026732,NM_005249	chr14,chr14,chr14,chr14	-,+,+,+	PRKD1,C14orf23,C14orf23,FOXG1	1152940,-1930,-1930,-7553
chr4:99051995-99053718	chr4	+	99052130	99053749	True	NM_174952,NM_001100426	chr4,chr4	-,+	C4orf37,RAP1GDS1	10692,128777
chr7:5555690-5556091	chr7	+	5555816	5555978	True	NM_024963,NM_003088	chr7,chr7	-,+	FBXL18,FSCN1	-2417,76475
chr1:220096441-220097259	chr1	+	220096457	220097126	True	NM_018060,NM_018713	chr1,chr1	+,-	IARS2,SLC30A10	170328,4925
chr11:1074627-1074867	chr11	+	1074669	1074736	True	NM_002457,NM_005961	chr11,chr11	+,-	MUC2,MUC6	138,-37963
chr20:23068999-23069437	chr20	+	23069048	23069472	True	NM_001052,NM_012072	chr20,chr20	+,-	SSTR4,CD93	-53042,-2071
chr9:975073-975896	chr9	+	975076	975934	True	NM_021240,NM_152569	chr9,chr9	+,-	DMRT3,C9orf66	1029,-759183
chr20:45311790-45312686	chr20	+	45311807	45312632	True	NM_030777,NM_033550,NM_001011554,NM_001193340	chr20,chr20,chr20,chr20	+,-,-,-	SLC2A10,TP53RK,SLC13A3,SLC13A3	25646,5701,549,549
chr6:38673757-38675541	chr6	+	38673812	38674984	True	NM_006708,NM_001371	chr6,chr6	-,+	GLO1,DNAH8	-2860,15567
chr17:15394230-15394504	chr17	+	15394356	15394522	True	NM_001204477,NM_001130842	chr17,chr17	-,+	CDRT4,ZNF286A	-23431,208368
chr1:111390589-111390810	chr10	-	64913901	64913951	True	NM_004241,NM_030759	chr10,chr10	-,+	JMJD1C,NRBF2	115081,-20945
chr2:11273042-11273270	chr2	+	11273178	11273264	True	NM_182500,NM_004850	chr2,chr2	+,-	C2orf50,ROCK2	-50,211497
chr9:139556040-139556555	chr9	+	139556158	139556574	True	NM_201446,NM_016215,NR_029695,NM_001012727	chr9,chr9,chr9,chr9	+,+,+,-	EGFL7,EGFL7,MIR126,AGPAT2	802,807,8479,25387
chr17:26225067-26225665	chr17	+	26225161	26225611	True	NM_001076680,NM_016231	chr17,chr17	-,+	C17orf108,NLK	-4752,144076
chr22:25155109-25155920	chr22	+	25155141	25155797	True	NM_001008496,NR_001283	chr22,chr22	-,+	PIWIL3,TOP1P2	14936,4670
chr10:17498442-17499455	chr10	+	17498694	17499478	True	NM_001004470,NR_034129	chr10,chr10	-,+	ST8SIA6,LOC100128098	-2440,-69825
chr2:209057595-209058495	chr2	+	209057628	209058416	True	NM_001178000,NM_001099334	chr2,chr2	+,-	PIKFYVE,C2orf80	72574,-2855
chr22:39149687-39150058	chr22	+	39149713	39150059	True	NM_015374,NM_001199580,NM_004286,NM_001199579	chr22,chr22,chr22,chr22	-,-,+,-	SUN2,SUN2,GTPBP1,SUN2	2015,1458,-47964,2015
chr2:99761034-99762600	chr2	+	99761141	99762284	True	NR_037935,NR_037936,NM_015929,NM_025244,NM_145198,NM_144706,NM_145197,NM_145196,NM_145199,NM_182911,NM_001204830	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,-,+,+,+,+,+,-,+	LIPT1,LIPT1,LIPT1,TSGA10,LIPT1,C2orf15,LIPT1,LIPT1,LIPT1,TSGA10,LIPT1	9252,9133,9133,8953,9133,-3007,9133,9133,9133,-3104,9252
chr4:169239936-169241415	chr4	+	169239987	169241322	True	NM_017631,NM_001166108	chr4,chr4	-,+	DDX60,PALLD	-29,176894
chr11:6790176-6791853	chr11	+	6790240	6791875	True	NM_001004490,NM_001004489	chr11,chr11	-,+	OR2AG2,OR2AG1	-52,14372
chr9:139758186-139759368	chr9	+	139758229	139758997	True	NM_003792,NM_153200,NM_206920	chr9,chr9,chr9	-,-,+	EDF1,EDF1,MAMDC4	1791,1791,-11461
chr19:48493520-48494516	chr19	+	48493620	48494486	True	NM_022142,NM_001128326	chr19,chr19	+,-	ELSPBP1,BSPH1	3421,991
chr9:127271463-127272199	chr9	+	127271530	127271688	True	NM_004959,NM_001161808	chr9,chr9	-,+	NR5A1,GPR144	-1831,-58168
chr11:69634085-69634441	chr11	+	69634085	69634274	True	NM_005247,NM_053056	chr11,chr11	-,+	FGF3,CCND1	-28,-178263
chr6:26103513-26104243	chr6	+	26103591	26104280	True	NM_003542,NM_005323	chr6,chr6	+,-	HIST1H4C,HIST1H1T	-9,4134
chr7:117056163-117056485	chr7	+	117056269	117056385	True	NM_000492,NM_130768	chr7,chr7	+,-	CFTR,ASZ1	63631,11244
chr1:204135621-204136236	chr1	+	204135662	204135980	True	NM_005686,NM_000537	chr1,chr1	+,-	SOX13,REN	-93467,-197
chr7:7723991-7725232	chr7	+	7724195	7724820	True	NR_034084,NM_002947	chr7,chr7	+,-	LOC729852,RPA3	-43910,33477
chr4:154681370-154682284	chr4	+	154681507	154682080	True	NM_173662,NM_003264	chr4,chr4	-,+	RNF175,TLR2	-120,-76117
chr17:48251257-48252001	chr17	+	48251761	48251825	True	NR_024192,NR_024193,NM_001135697,NM_000023	chr17,chr17,chr17,chr17	-,-,+,+	HILS1,HILS1,SGCA,SGCA	-1924,-1924,-8446,-8446
chr7:142631434-142632131	chr7	+	142631508	142631739	True	NM_178829,NM_019841	chr7,chr7	+,-	C7orf34,TRPV5	4863,-688
chr3:39423751-39424358	chr3	+	39423787	39424167	True	NM_001171174,NM_017875	chr3,chr3	-,+	CX3CR1,SLC25A38	-100561,647
chr9:4741730-4742370	chr9	+	4741930	4742390	True	NM_001199855,NM_001199854,NM_005772,NM_001199853,NM_001199852,NM_016282	chr9,chr9,chr9,chr9,chr9,chr9	-,-,+,-,-,-	AK3,AK3,RCL1,AK3,AK3,AK3	-131,-777,50443,25,-621,-621
chr11:64321435-64321937	chr11	+	64321506	64321882	True	NM_018484,NM_138734	chr11,chr11	+,-	SLC22A11,NRXN2	1215,88955
chr5:127874919-127875161	chr5	+	127875014	127875162	True	NM_014031,NM_001999	chr5,chr5	+,-	SLC27A6,FBN2	426047,-1279
chr5:140754882-140755400	chr5	+	140754888	140755236	True	NM_018924,NM_032086,NM_018920,NM_032097,NM_018919,NM_005642,NM_032087	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,-,+	PCDHGB3,PCDHGA6,PCDHGA7,PCDHGB3,PCDHGA6,TAF7,PCDHGA7	-4977,-1288,7230,-4977,-1288,-54537,7230
chr20:44718040-44718244	chr20	+	44718063	44718201	True	NM_020967,NM_001250	chr20,chr20	-,+	NCOA5,CD40	429,28704
chr7:44615395-44616246	chr7	+	44615566	44616112	True	NM_182547,NM_001003941,NM_019082	chr7,chr7,chr7	-,+,-	TMED4,OGDH,DDX56	5773,30008,-1429
chr12:2166983-2167449	chr12	+	2167119	2167469	True	NM_001129834,NM_001129835,NM_001129836,NM_001129837,NM_001129830,NM_001129831,NM_001129832,NM_001129833,NM_001129838,NM_001129839,NM_199460,NM_001129841,NM_001129840,NM_001129843,NM_001129842,NM_001129844,NM_001129846,NM_001129827,NM_152640,NM_001129829,NM_000719,NM_001167623,NM_001167625,NM_001167624	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,-,+,+,+,+,+	CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,DCP1B,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C	-4754,-4754,-4754,-4754,-4754,-4754,-4754,-4754,-4754,-4754,-4754,-4754,-4754,-4754,-4754,-4754,-4754,-4754,-53442,-4754,-4754,-4754,-4754,-4754
chr17:19991736-19993243	chr17	+	19991791	19993193	True	NM_001033553,NM_152904,NM_007202	chr17,chr17,chr17	+,+,-	SPECC1,SPECC1,AKAP10	-1507,-1507,-110662
chr2:25261419-25262217	chr2	+	25261461	25262215	True	NM_016544,NM_014971	chr2,chr2	-,+	DNAJC27,EFR3B	-66498,2757
chr1:32757864-32758641	chr1	+	32758033	32758632	True	NM_023009,NM_004964	chr1,chr1	-,+	MARCKSL1,HDAC1	43253,-377
chr6:35696112-35696884	chr6	+	35696221	35696865	True	NR_027117,NM_001145775,NM_145028	chr6,chr6,chr6	-,-,+	LOC285847,FKBP5,C6orf81	7909,139,7993
chr8:17574222-17575342	chr8	+	17574380	17575360	True	NM_001001931,NM_006207,NM_001166393	chr8,chr8,chr8	-,+,-	MTUS1,PDGFRL,MTUS1	4420,-140498,4774
chr20:32947921-32948589	chr20	+	32948047	32948242	True	NM_031483,NM_001161766	chr20,chr20	+,-	ITCH,AHCY	2819,-48439
chr14:74709236-74709468	chr14	+	74709348	74709424	True	NM_182894,NM_005050	chr14,chr14	+,-	VSX2,ABCD4	-3229,60393
chr9:21965666-21965988	chr9	+	21965683	21966027	True	NM_058197,NM_001195132,NM_000077,NR_024274	chr9,chr9,chr9,chr9	-,-,-,+	CDKN2A,CDKN2A,CDKN2A,C9orf53	8849,9155,9155,1110
chr15:91565833-91566681	chr15	+	91565894	91566296	True	NM_018668,NM_033544	chr15,chr15	-,+	VPS33B,RCCD1	-61,-67839
chr4:102267286-102267591	chr4	+	102267398	102267548	True	NM_001130692,NM_000944,NM_001130691,NR_033874	chr4,chr4,chr4,chr4	-,-,-,+	PPP3CA,PPP3CA,PPP3CA,FLJ20021	1130,1130,1130,1385
chr9:130473573-130473937	chr9	+	130473572	130473720	True	NM_001002913,NM_144965,NM_001012502	chr9,chr9,chr9	-,+,+	PTRH1,TTC16,C9orf117	4266,4637,-4352
chrX:16802834-16803072	chrX	+	16802834	16802927	True	NM_019857,NM_001168683,NM_018360	chrX,chrX,chrX	-,+,+	CTPS2,TXLNG,TXLNG	-71775,1627,1627
chr1:151879761-151880438	chr1	+	151879838	151880420	True	NR_024237,NM_053055	chr1,chr1	+,-	LOC100132111,THEM4	-68957,1991
chr19:21944699-21946388	chr19	+	21945084	21946042	True	NR_024523,NM_173531	chr19,chr19	+,-	LOC641367,ZNF100	-11596,4438
chr8:102178741-102179462	chr8	+	102178830	102179477	True	NM_001042511,NR_033962	chr8,chr8	-,+	ZNF706,FLJ42969	38446,-114599
chr2:26104553-26105635	chr2	+	26104798	26105595	True	NM_018263,NM_016131	chr2,chr2	-,+	ASXL2,RAB10	-3486,151133
chr16:87423809-87424137	chr16	+	87423906	87424031	True	NM_022818,NM_024735,NR_024568	chr16,chr16,chr16	+,-,-	MAP1LC3B,FBXO31,FBXO31	1769,-6512,1736
chr16:19300507-19301719	chr16	+	19300584	19301753	True	NR_024436,NM_016641	chr16,chr16	+,-	LOC728276,GDE1	-3532,231748
chr17:40812216-40812919	chr17	+	40812319	40812868	True	NM_024927,NM_016437	chr17,chr17	-,+	PLEKHH3,TUBG2	16233,-1104
chr21:46101359-46102695	chr21	+	46101578	46102572	True	NM_181686,NM_198699	chr21,chr21	-,+	KRTAP12-1,KRTAP10-12	-150,14514
chr8:90913431-90914084	chr8	+	90913558	90914040	True	NM_004337,NM_002485,NM_001126111	chr8,chr8,chr8	+,-,+	OSGIN2,NBN,OSGIN2	55,82909,721
chr14:105389146-105389782	chr14	+	105389238	105389650	True	NM_138420,NM_138790	chr14,chr14	-,+	AHNAK2,PLD4	55094,1536
chr19:9895818-9896582	chr19	+	9896260	9896630	True	NM_001048241,NM_001077624	chr19,chr19	+,-	UBL5,ZNF846	41937,-16850
chr1:55266187-55266417	chr1	+	55266258	55266388	True	NM_152607,NM_001114108,NM_001110533,NM_017904	chr1,chr1,chr1,chr1	+,-,+,-	C1orf177,TTC22,C1orf177,TTC22	5347,603,5347,603
chr18:6839589-6840223	chr18	+	6839780	6840261	True	NR_034100,NM_001010000	chr18,chr18	-,+	LOC400643,ARHGAP28	89658,-5410
chr2:36583689-36584067	chr2	+	36583717	36583865	True	NR_037631,NM_016441	chr2,chr2	-,+	LOC100288911,CRIM1	-1004,-398
chr16:89161532-89161980	chr16	+	89161588	89161913	True	NM_001127214,NR_023316,NM_174917,NM_005187	chr16,chr16,chr16,chr16	+,+,+,-	ACSF3,ACSF3,ACSF3,CBFA2T3	-1385,-1385,-1385,-118084
chr17:42147294-42147886	chr17	+	42147358	42147696	True	NR_028581,NR_028582,NM_138387,NM_152344	chr17,chr17,chr17,chr17	+,+,+,-	G6PC3,G6PC3,G6PC3,LSM12	401,401,401,-2371
chr20:23301085-23301555	chr20	+	23301090	23301515	True	NM_013248,NM_022080	chr20,chr20	+,-	NXT1,NAPB	29857,100692
chr7:100453456-100453920	chr7	+	100453460	100453730	True	NM_020246,NM_004444	chr7,chr7	+,-	SLC12A9,EPHB4	-3153,-28317
chr2:42411126-42411546	chr2	+	42411125	42411595	True	NM_019063,NM_004718	chr2,chr2	+,-	EML4,COX7A2L	-14690,176811
chr9:116261226-116262510	chr9	+	116261582	116262462	True	NM_017443,NM_130795	chr9,chr9	-,+	POLE3,RGS3	-88553,1244
chr10:27527199-27527846	chr10	+	27527257	27527829	True	NM_032844,NR_024150,NM_145698,NM_001042473	chr10,chr10,chr10,chr10	+,-,-,-	MASTL,ACBD5,ACBD5,ACBD5	-83563,3297,2037,3297
chr17:7553303-7553799	chr17	+	7553302	7553844	True	NM_001678,NM_133491	chr17,chr17	+,-	ATP1B2,SAT2	409,-22108
chr18:44494377-44495062	chr18	+	44494385	44495033	True	NM_173206,NM_004671,NM_031303	chr18,chr18,chr18	-,-,+	PIAS2,PIAS2,KATNAL2	2483,2483,31753
chr19:852012-852232	chr19	+	852082	852146	True	NM_001972,NM_001928,NM_024888	chr19,chr19,chr19	+,+,-	ELANE,CFD,LPPR3	144,7518,-30130
chr19:50399984-50400665	chr19	+	50400015	50400395	True	NM_152899,NM_024682	chr19,chr19	-,+	IL4I1,TBC1D17	-54,-19384
chr22:27010554-27011771	chr22	+	27010554	27011390	True	NM_001886,NM_001887	chr22,chr22	+,-	CRYBA4,CRYBB1	6537,2652
chr4:78000849-78002041	chr4	+	78001202	78001922	True	NM_004354,NM_006835	chr4,chr4	+,-	CCNG2,CCNI	76434,-4077
chr16:2481535-2481990	chr16	+	2481728	2481840	True	NM_001761,NM_001089	chr16,chr16	+,-	CCNF,ABCA3	-2397,-90981
chr13:25155804-25157225	chr13	+	25155908	25157235	True	NM_006437,NR_002815	chr13,chr13	-,+	PARP4,LOC374491	-68960,-1621
chr19:29702906-29703617	chr19	+	29703002	29703547	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	-247015,639
chr11:120013193-120014003	chr11	+	120013209	120014028	True	NM_012101,NM_178507	chr11,chr11	-,+	TRIM29,OAF	-4346,67718
chr19:10380580-10380816	chr19	+	10380664	10380818	True	NM_000201,NM_004230	chr19,chr19	+,-	ICAM1,S1PR2	698,-38716
chr16:72202602-72204370	chr16	+	72202668	72204276	True	NM_001160213,NM_031293,NM_014003	chr16,chr16,chr16	-,-,+	PMFBP1,PMFBP1,DHX38	2132,1847,-75111
chr16:50188219-50188636	chr16	+	50188356	50188669	True	NM_001040285,NM_001040284,NM_001173984	chr16,chr16,chr16	+,+,-	PAPD5,PAPD5,BRD7	-1578,-1578,214226
chr1:162531611-162531816	chr1	+	162531635	162531701	True	NM_053282,NM_003115	chr1,chr1	-,+	SH2D1B,UAP1	-149707,-390
chr18:43676667-43677490	chr18	+	43676996	43677506	True	NR_026978,NM_138443,NM_004046,NM_001001937	chr18,chr18,chr18,chr18	+,+,-,-	HAUS1,HAUS1,ATP5A1,ATP5A1	6791,6791,831,6743
chr1:202936938-202937190	chr1	+	202937001	202937215	True	NM_016243,NM_001127687,NM_015999,NM_138391	chr1,chr1,chr1,chr1	-,-,-,+	CYB5R1,ADIPOR1,ADIPOR1,TMEM183A	-597,-9301,-9516,39318
chr6:109419642-109420911	chr6	+	109420011	109420717	True	NM_014454,NM_001083535	chr6,chr6	-,+	SESN1,CEP57L1	-4303,-3707
chr6:30228429-30229184	chr6_qbl_hap6	+	1521596	1521672	False	NR_027822,NM_003449	chr6_qbl_hap6,chr6_qbl_hap6	+,-	HLA-L,TRIM26	-1392,-47522
chr6:30228429-30229184	chr6_dbb_hap3	+	1522359	1522435	False	NR_027822,NM_003449	chr6_dbb_hap3,chr6_dbb_hap3	+,-	HLA-L,TRIM26	-1394,-47522
chr6:30228429-30229184	chr6_ssto_hap7	+	1558683	1558759	False	NR_027822,NM_003449	chr6_ssto_hap7,chr6_ssto_hap7	+,-	HLA-L,TRIM26	-1394,-47118
chr6:30228429-30229184	chr6	+	30228682	30228758	True	NR_027822,NM_003449	chr6,chr6	+,-	HLA-L,TRIM26	-1394,-47529
chr2:231191891-231192839	chr2	+	231192084	231192748	True	NM_138402,NM_001185015	chr2,chr2	+,-	SP140L,SP110	-248,-101640
chr3:4508951-4509603	chr3	+	4508988	4509505	True	NM_001099952,NM_182760,NM_001164675,NM_001164674	chr3,chr3,chr3,chr3	+,-,-,-	ITPR1,SUMF1,SUMF1,SUMF1	25526,-22,-22,-22
chr15:44068214-44068416	chr15	+	44068242	44068462	True	NM_001199877,NM_025165	chr15,chr15	+,-	SERF2,ELL3	831,1090
chr20:43739931-43740464	chr20	+	43740038	43740400	True	NM_145652,NM_002638	chr20,chr20	-,+	WFDC5,PI3	3453,63139
chr2:180092444-180093017	chr2	+	180092528	180093052	True	NM_178123,NM_019091	chr2,chr2	-,+	SESTD1,PLEKHA3	36348,-747380
chr8:37468247-37470013	chr8	+	37468478	37469946	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	83354,135668
chr18:60981663-60982418	chr18	+	60981723	60982361	True	NM_002639,NM_000657,NM_000633	chr18,chr18,chr18	+,-,-	SERPINB5,BCL2,BCL2	161782,4302,4302
chr17:18160052-18160617	chr17	+	18160106	18160666	True	NM_001144900,NM_148886,NM_002018,NM_139162	chr17,chr17,chr17,chr17	+,+,-,+	SMCR7,SMCR7,FLII,SMCR7	3181,3757,1439,3181
chr9:4662542-4662856	chr9	+	4662609	4662905	True	NM_203453,NM_001039395	chr9,chr9	+,-	PPAPDC2,C9orf68	-362,3819
chr5:140226572-140228185	chr5	+	140226834	140228124	True	NM_014005,NM_031860,NM_002109,NM_018911,NM_031859,NM_018901,NM_031857,NM_031856	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,-,+,+,+,+,+	PCDHA9,PCDHA10,HARS,PCDHA8,PCDHA10,PCDHA10,PCDHA9,PCDHA8	-221,7509,-155863,-5978,7509,7509,-221,-5978
chr16:55520963-55521487	chr16	+	55521005	55521420	True	NM_001127891,NM_001025194,NM_004530	chr16,chr16,chr16	+,-,+	MMP2,CES1,MMP2	-5593,345706,-7986
chr4:80782558-80782931	chr4	+	80782565	80782969	True	NR_026555,NM_058172	chr4,chr4	+,-	GDEP,ANTXR2	-34000,211558
chr5:172480668-172481558	chr5	+	172481057	172481499	True	NM_001168393,NR_026682,NM_001168394,NM_153607	chr5,chr5,chr5,chr5	+,-,+,+	C5orf41,LOC100268168,C5orf41,C5orf41	1855,-94686,1855,1855
chr6:66498001-66498500	chr6	+	66498038	66498488	True	NR_026540,NM_001142801	chr6,chr6	+,-	MCART3P,EYS	-317,-80920
chr2:26566604-26567170	chr2	+	26566640	26567002	True	NM_033505,NM_153835	chr2,chr2	+,-	EPT1,GPR113	1951,2740
chr16:14928677-14929921	chr16	+	14928753	14929965	True	NR_023387,NM_014287	chr16,chr16	-,+	ABCC6P2,NOMO1	-10194,-1161
chr16:14928677-14929921	chr16	+	16327569	16328394	False	NM_001079528,NM_001004067	chr16,chr16	-,+	ABCC6,NOMO3	-10241,-1231
chr16:14928677-14929921	chr16	-	18571482	18572305	False	NM_001004060,NM_173614,NR_003569	chr16,chr16,chr16	-,-,+	NOMO2,NOMO2,ABCC6P1	1179,1179,10264
chr6:151715726-151717043	chr6	+	151716062	151716801	True	NM_020861,NM_024573	chr6,chr6	-,+	ZBTB2,C6orf211	-3385,56620
chr20:46017915-46019065	chr20	+	46018613	46019074	True	NM_183048,NR_024594	chr20,chr20	-,+	ZMYND8,LOC100131496	-33139,-71421
chr11:75433530-75433744	chr11	+	75433556	75433748	True	NM_025098,NM_207577	chr11,chr11	+,-	MOGAT2,MAP6	-4673,-54077
chr12:75877466-75879421	chr12	+	75877596	75879264	True	NM_007043,NM_006851	chr12,chr12	-,+	KRR1,GLIPR1	26217,-3134
chr2:132183725-132184520	chr2	+	132183992	132184559	True	NR_002826,NR_036499	chr2,chr2	-,+	LOC401010,LOC389043	17959,-23578
chr1:11713389-11713900	chr1	+	11713459	11713737	True	NM_183412,NM_183413,NM_001014765,NM_012168,NM_033182	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	FBXO44,FBXO44,FBXO44,FBXO2,FBXO44	694,1176,1176,1201,1176
chr11:24518892-24519123	chr11	+	24518950	24519170	True	NM_001009909,NM_001195637	chr11,chr11	+,-	LUZP2,LOC100500938	-445,-1636978
chr17:40973369-40974143	chr17	+	40973507	40973873	True	NM_003766,NM_005789	chr17,chr17	-,+	BECN1,PSME3	2501,11549
chr1:228336787-228337293	chr1	+	228336813	228337305	True	NM_000858,NM_020435,NM_181465,NM_001159390,NM_001159391	chr1,chr1,chr1,chr1,chr1	+,+,-,+,+	GUK1,GJC2,MRPL55,GUK1,GUK1	-8935,247,-39800,-8935,-4460
chr13:111637718-111638793	chr13	+	111637882	111638793	True	NM_017664,NM_001113511	chr13,chr13	-,+	ANKRD10,ARHGEF7	-70466,128830
chr17:79791851-79792070	chr17	+	79791869	79791977	True	NM_207368,NM_000160,NM_001093767,NM_001007533	chr17,chr17,chr17,chr17	-,+,-,-	FAM195B,GCGR,FAM195B,DYSFIP1	-702,-29910,-702,999
chr10:135052898-135053350	chr10	+	135052928	135053212	True	NR_030170,NM_014468,NM_003577	chr10,chr10,chr10	-,+,+	MIR202,VENTX,UTF1	7962,-1571,-9201
chr6:53192860-53194476	chr6	+	53192924	53194353	True	NM_012347,NM_021814	chr6,chr6	+,-	FBXO9,ELOVL5	-257204,19639
chr2:74276245-74276835	chr2	+	74276421	74276847	True	NM_144993,NM_001035505	chr2,chr2	+,-	TET3,BOLA3	-3022,98242
chr20:3866963-3868046	chr20	+	3866962	3867589	True	NM_024960,NM_153638,NM_153640,NR_031722	chr20,chr20,chr20,chr20	+,+,+,-	PANK2,PANK2,PANK2,MIR103-2AS	1896,2152,2873,30682
chr22:19166366-19166607	chr22	+	19166419	19166599	True	NM_053006,NM_005984,NR_033687	chr22,chr22,chr22	+,-,-	TSSK2,SLC25A1,SLC25A1	-48149,-118,-385
chr7:140838154-140838502	chr7	+	140838178	140838510	True	NM_053035,NM_001195278	chr7,chr7	-,+	MRPS33,LOC100131199	-123397,-64202
chr19:1174284-1174661	chr19	+	1174343	1174667	True	NM_000455,NM_014963	chr19,chr19	+,-	STK11,SBNO2	31130,-61
chr22:29604043-29604348	chr22	+	29604058	29604274	True	NM_012265,NM_133455	chr22,chr22	-,+	RHBDD3,EMID1	59690,-2156
chr11:65101747-65103325	chr11	+	65102005	65103234	True	NM_006268,NM_001077241	chr11,chr11	+,-	DPF2,SLC25A45	-710,46958
chrX:153211606-153212437	chrX	+	153211697	153212279	True	NM_002910,NM_003492	chrX,chrX	-,+	RENBP,TMEM187	-1465,25711
chr12:54757369-54758362	chr12	+	54757447	54758402	True	NR_029894,NM_020370	chr12,chr12	+,-	MIR148B,GPR84	-26498,22
chr10:134902808-134903044	chr10	+	134902817	134903093	True	NM_173572,NM_001083909	chr10,chr10	-,+	C10orf93,GPR123	-146728,-1459
chr9:32633681-32634041	chr9	+	32633709	32634031	True	NM_153809,NR_033992	chr9,chr9	-,+	TAF1L,LOC100129250	1688,-81993
chrX:134954325-134954637	chrX	+	134954433	134954496	True	NM_001007551,NM_018666,NM_001172288	chrX,chrX,chrX	-,+,-	CT45A5,SAGE1,CT45A5	-439,21288,-439
chrX:134954325-134954637	chrX	+	134937178	134937241	False	NM_018666,NM_001017436	chrX,chrX	+,-	SAGE1,CT45A4	38543,-443
chrX:134954325-134954637	chrX	-	134865707	134865770	False	NM_152582,NM_001017436	chrX,chrX	+,+	CT45A2,CT45A4	443,443
chrX:134954325-134954637	chrX	-	134882982	134883045	False	NM_001017436,NM_001017435	chrX,chrX	-,+	CT45A4,CT45A3	53741,442
chr8:26435713-26436063	chr8	+	26435789	26436080	True	NM_001386,NM_007257	chr8,chr8	+,-	DPYSL2,PNMA2	-419,-64306
chr12:121413184-121413678	chr12	+	121413234	121413655	True	NR_024345,NM_000545	chr12,chr12	-,+	NCRNA00262,HNF1A	-3139,2893
chr17:43323917-43324295	chr17	+	43324120	43324268	True	NR_024434,NM_152343	chr17,chr17	+,-	LOC100133991,C17orf46	1034,15261
chr13:113027046-113028436	chr13	+	113027726	113028484	True	NM_006322,NM_145248	chr13,chr13	-,+	TUBGCP3,SPACA7	214047,2166
chr5:173145511-173146895	chr5	+	173145526	173146724	True	NR_027109,NM_138369	chr5,chr5	+,-	LOC285593,BOD1	-138920,-101860
chr10:104516545-104518467	chr10	+	104517083	104518347	True	NM_004311,NM_001083913	chr10,chr10	-,+	ARL3,C10orf26	-42893,-13407
chr15:73919295-73920598	chr15	+	73919606	73920647	True	NM_017455,NM_001161363,NM_001161364,NM_012428,NM_001024736	chr15,chr15,chr15,chr15,chr15	-,-,-,-,+	NPTN,NPTN,NPTN,NPTN,CD276	5167,5167,5167,5167,55974
chr15:99791068-99791408	chr15	+	99791077	99791361	True	NM_001040658,NM_001040659,NM_001040656,NM_001040657,NM_001040655,NM_144598,NM_022905,NM_001040660	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,-,-,-,+,-,-	TTC23,TTC23,TTC23,TTC23,TTC23,LRRC28,TTC23,TTC23	-1262,-1262,-1262,-1262,-1262,290,-1262,-1262
chr15:60773586-60775010	chr15	+	60773748	60774741	True	NM_012182,NM_001018089,NM_024611	chr15,chr15,chr15	+,-,-	FOXB1,NARG2,NARG2	-477378,-2404,-2404
chr5:53605195-53605622	chr5	+	53605206	53605666	True	NM_006308,NM_019087	chr5,chr5	+,-	HSPB3,ARL15	145764,787
chr6:47253820-47254242	chr6	+	47253825	47254271	True	NM_012120,NM_014452	chr6,chr6	+,-	CD2AP,TNFRSF21	191253,23459
chr15:90894086-90894343	chr15	+	90894226	90894350	True	NR_028287,NM_001004309	chr15,chr15	-,+	GABARAPL3,ZNF774	-1547,1126
chr22:35883250-35884086	chr22	+	35883349	35883874	True	NM_005368,NM_014310	chr22,chr22	-,+	MB,RASD2	129561,53477
chr3:48664100-48665508	chr3	+	48664429	48665441	True	NM_134263,NM_022911,NM_134426,NM_033629,NM_001040454,NM_001008269	chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,+,-,-	SLC26A6,SLC26A6,SLC26A6,TREX1,SLC26A6,TMEM89	7535,7535,7535,-157251,5888,-5240
chr14:60631883-60632139	chr14	+	60631886	60632104	True	NM_022495,NM_016029	chr14,chr14	+,-	C14orf135,DHRS7	-73308,157
chr17:56247396-56247792	chr17	+	56247604	56247810	True	NM_017777,NM_001004707	chr17,chr17	-,+	MKS1,OR4D2	48906,-638
chr5:6318111-6318731	chr5	+	6318239	6318501	True	NM_001145161,NR_028351	chr5,chr5	+,-	UBE2QL1,FLJ33360	130234,18954
chr19:18722811-18723156	chr19	+	18723066	18723204	True	NM_012109,NM_004750	chr19,chr19	+,-	TMEM59L,CRLF1	477,-5406
chr3:178864435-178865903	chr3	+	178864950	178865836	True	NM_152240,NM_006218	chr3,chr3	-,+	ZMAT3,PIK3CA	-75294,474
chr7:65890423-65891538	chr7	+	65890422	65891403	True	NR_026873,NM_001167961	chr7,chr7	-,+	NCRNA00174,KCTD7	-25027,202464
chr7:151107401-151107617	chr7	+	151107442	151107626	True	NR_034012,NR_034013,NM_198285	chr7,chr7,chr7	+,+,-	LOC100131176,LOC100131176,WDR86	-1171,-1171,-318
chr1:207039475-207039920	chr1	+	207039541	207039955	True	NM_001193338,NM_018724	chr1,chr1	-,+	FAIM3,IL20	55330,-438
chr1:54354847-54355262	chr1	+	54354850	54355242	True	NM_018982,NM_213593,NR_036640,NM_000792,NR_036639,NM_001039716,NM_001039715	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,+,-,+,-,+,+	YIPF1,DIO1,YIPF1,DIO1,YIPF1,DIO1,DIO1	295,4618,295,4618,295,4618,4618
chr19:52799064-52799671	chr19	+	52799149	52799318	True	NM_001102657,NM_144684	chr19,chr19	-,+	ZNF836,ZNF480	-124253,1107
chr15:67427653-67428761	chr15	+	67427784	67428635	True	NM_001145102,NM_001145103,NM_024666	chr15,chr15,chr15	+,+,-	SMAD3,SMAD3,AAGAB	-9782,1723,118489
chr1:116950962-116951673	chr1	+	116951015	116951617	True	NR_024126,NR_024125,NR_024124,NM_001160234,NR_027646,NR_027645	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,-	ATP1A1OS,ATP1A1OS,ATP1A1OS,ATP1A1,ATP1A1OS,ATP1A1OS	9614,9638,9630,-25081,9677,9630
chr19:33850093-33851600	chr19	+	33850097	33851407	True	NM_001806,NM_004364	chr19,chr19	+,-	CEBPG,CEBPA	13201,-56667
chr8:145160393-145161122	chr8	+	145160437	145161095	True	NM_030974,NR_024207,NM_032272	chr8,chr8,chr8	-,+,+	SHARPIN,KIAA1875,MAF1	-1297,1533,-1183
chr9:95301547-95302440	chr9	+	95301647	95302218	True	NR_036505,NM_001393,NM_001197295,NM_001197296	chr9,chr9,chr9,chr9	+,-,-,-	LOC100128361,ECM2,ECM2,ECM2	78113,-3273,-3273,-3273
chr15:50639278-50640162	chr15	+	50639431	50639945	True	NM_002041,NR_024490,NM_181427,NM_016655,NM_005254,NR_026891,NM_016654	chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,+,-,-,-,-,-	GABPB1,LOC100129387,GABPB1,GABPB1,GABPB1,FLJ10038,GABPB1	7710,6425,7710,7710,7710,7181,7710
chrX:133371986-133372561	chrX	+	133371990	133372383	True	NM_001101357,NR_029523	chrX,chrX	+,-	CCDC160,MIR106A	-964,-67682
chr7:7706302-7706733	chr7	+	7706344	7706782	True	NR_034084,NM_002947	chr7,chr7	+,-	LOC729852,RPA3	-26060,51506
chr1:151482265-151482591	chr1	+	151482378	151482638	True	NM_145796,NM_020770	chr1,chr1	-,+	POGZ,CGN	-50437,1223
chr12:7635878-7636595	chr12	+	7635924	7636338	True	NM_001080454,NM_004244	chr12,chr12	+,-	ACSM4,CD163	-179047,20134
chr1:119530700-119531076	chr1	+	119530834	119531064	True	NM_001005783,NM_152380	chr1,chr1	+,-	HAO2,TBX15	380337,1165
chr10:29710283-29711163	chr10	+	29710308	29711092	True	NR_030335,NR_003930	chr10,chr10	-,+	MIR604,LOC387647	122984,-11859
chr6:50787637-50787869	chr6	+	50787636	50787852	True	NM_001037498,NM_003221	chr6,chr6	-,+	DEFB112,TFAP2B	-771272,-1248
chr6:46635269-46635870	chr6	+	46635286	46635785	True	NM_016593,NM_004277	chr6,chr6	-,+	CYP39A1,SLC25A27	-14763,-14685
chr17:61974649-61975055	chr17	+	61974680	61975048	True	NM_022641,NM_022640,NR_002947,NM_001317	chr17,chr17,chr17,chr17	-,-,+,-	CSH1,CSH1,TCAM1P,CSH1	-659,-659,-40362,-659
chr17:61974649-61975055	chr17	+	61960033	61960090	False	NM_020991,NM_022645,NM_022644,NM_022557,NM_022556,NR_002947,NM_002059,NM_022558	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,+,-,-	CSH2,CSH2,CSH2,GH2,GH2,TCAM1P,GH2,GH2	-8944,-8944,-8944,-810,-810,-25715,-810,-810
chr10:50595631-50596975	chr10	+	50595762	50596957	True	NM_001080520,NM_199459	chr10,chr10	-,+	DRGX,C10orf71	3000,-88628
chr20:5100549-5100811	chr20	+	5100555	5100847	True	NM_001009923,NM_182649,NM_001009925,NM_001009924,NR_028370,NM_002592,NM_014145,NM_003818	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	-,-,-,-,+,-,-,+	C20orf30,PCNA,C20orf30,C20orf30,PCNA-AS1,PCNA,C20orf30,CDS2	-6822,82,-6822,-6822,-374,6471,-6822,6634
chr7:92774881-92775342	chr7	+	92774881	92775393	True	NM_024553,NM_152703	chr7,chr7	+,-	CCDC132,SAMD9L	86259,2345
chr19:3135362-3135682	chr19	+	3135475	3135575	True	NM_198969,NM_002068	chr19,chr19	-,+	AES,GNA15	-72511,615
chr4:6272227-6273119	chr4	+	6272363	6273037	True	NM_006005,NM_144720,NM_001145853	chr4,chr4,chr4	+,-,+	WFS1,JAKMIP1,WFS1	-843,-70045,-843
chr3:146215876-146216425	chr3	+	146216177	146216469	True	NM_003412,NM_001199979	chr3,chr3	+,-	ZIC1,PLSCR2	910711,-2399
chr19:3970535-3970866	chr19	+	3970584	3970646	True	NM_015897,NM_001348,NR_030367	chr19,chr19,chr19	+,-,-	PIAS4,DAPK3,MIR637	37102,-758,-9074
chr4:62411340-62411896	chr4	+	62411650	62411946	True	NM_015236,NM_001010874	chr4,chr4	+,-	LPHN3,TECRL	-48863,2863288
chr12:124156168-124156671	chr12	+	124156303	124156653	True	NM_001414,NM_024809,NM_001143850	chr12,chr12,chr12	-,+,+	EIF2B1,TCTN2,TCTN2	-37980,-694,-694
chrX:148584080-148585193	chrX	+	148584109	148584687	True	NM_006123,NM_001166550,NM_000202,NM_001171907	chrX,chrX,chrX,chrX	-,-,-,+	IDS,IDS,IDS,CXorf40A	2247,2247,2247,37831
chr20:23621295-23621828	chr20	+	23621300	23621854	True	NM_000099,NR_001279	chr20,chr20	-,+	CST3,CSTT	-2726,-121568
chr5:178987649-178988066	chr5	+	178987846	178987940	True	NM_005520,NM_001040451,NM_001040452	chr5,chr5,chr5	-,+,+	HNRNPH1,RUFY1,RUFY1	62840,-1174,-1174
chr7:56175223-56176432	chr7	+	56175502	56176187	True	NM_015411,NM_016139,NM_001145712	chr7,chr7,chr7	+,-,-	SUMF2,CHCHD2,LOC389493	-43636,-1315,7954
chr3:100429065-100430037	chr3	+	100429077	100429952	True	NM_001007565,NM_006070,NM_015429,NM_001195479,NM_001195478	chr3,chr3,chr3,chr3,chr3	+,+,-,+,+	TFG,TFG,ABI3BP,TFG,TFG	-1001,-960,282437,-960,-749
chr9:109939564-109939876	chr9	+	109939566	109939876	True	NM_002874,NR_031752	chr9,chr9	+,-	RAD23B,MIR548Q	105667,-90850
chr1:246728936-246729274	chr1	+	246729132	246729274	True	NM_152609,NM_001139459,NM_022366	chr1,chr1,chr1	+,+,-	CNST,CNST,TFB2M	364,364,341
chr10:72140525-72140954	chr10	+	72140524	72140993	True	NM_018239,NM_207119,NM_018205,NM_004096	chr10,chr10,chr10,chr10	-,-,-,+	LRRC20,LRRC20,LRRC20,EIF4EBP2	1440,472,1440,22867
chr8:7931831-7932097	chr8	+	7931856	7931976	True	NR_031689,NR_027424	chr8,chr8	-,+	MIR548I3,FAM66E	14685,-119372
chr8:7931831-7932097	chr8	-	12450112	12450163	False	NR_037492,NR_037495	chr8,chr8	-,+	MIR3926-1,MIR3926-2	134701,134582
chr8:7931831-7932097	chr8	-	7070669	7070722	False	NR_027000,NM_001164452	chr8,chr8	-,+	LOC349196,FAM90A14	50343,43703
chr8:7931831-7932097	chr8	-	7529268	7529321	False	NM_001136572,NM_001164452	chr8,chr8	-,+	FAM90A7,FAM90A14	-89093,43643
chr2:60782118-60782437	chr2	+	60782159	60782327	True	NM_022894,NM_022893,NM_138559,NM_018014	chr2,chr2,chr2,chr2	+,-,-,-	PAPOLG,BCL11A,BCL11A,BCL11A	201037,-1526,-1526,-1526
chr1:161284775-161285615	chr1	+	161284879	161285502	True	NM_003001,NM_001035511,NM_000530,NM_001035513,NM_001035512	chr1,chr1,chr1,chr1,chr1	+,+,-,+,+	SDHC,SDHC,MPZ,SDHC,SDHC	-764,-764,-5117,-764,-764
chr1:115396300-115396923	chr1	+	115396499	115396655	True	NM_003176,NM_025073	chr1,chr1	+,-	SYCP1,SIKE1	799,-73191
chr1:25739992-25740608	chr1	+	25740080	25740602	True	NM_020485,NM_138618,NM_138616,NM_138617,NM_018202	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	RHCE,RHCE,RHCE,RHCE,TMEM57	6811,6811,6811,6811,16785
chr1:25739992-25740608	chr1	-	25605894	25606244	False	NM_001127691,NM_020317,NM_016124	chr1,chr1,chr1	+,-,+	RHD,C1orf63,RHD	-6964,-31909,-6964
chr4:148658392-148658880	chr4	+	148658627	148658921	True	NM_138364,NM_024605	chr4,chr4	-,+	PRMT10,ARHGAP10	-53347,-5236
chr7:74266363-74266900	chr7	+	74266382	74266621	True	NM_173537,NR_027775	chr7,chr7	-,+	GTF2IRD2,PMS2P5	1271,40272
chr7:74266363-74266900	chr7	-	74509630	74509869	False	NM_030798,NM_001003795	chr7,chr7	-,+	WBSCR16,GTF2IRD2B	-19931,-1335
chrX:102763739-102764824	chrX	+	102763846	102764619	True	NM_001006935,NM_080879	chrX,chrX	+,-	TCEAL4,RAB40A	75799,9848
chr20:62670771-62671000	chr20	+	62670939	62671049	True	NR_027687,NR_027686,NM_018419	chr20,chr20,chr20	+,+,-	NCRNA00176,NCRNA00176,SOX18	-5293,-5293,9980
chr1:225964925-225965358	chr1	+	225965009	225965303	True	NM_003133,NM_001130440,NM_014698	chr1,chr1,chr1	+,+,-	SRP9,SRP9,TMEM63A	211,211,105167
chr13:49549340-49549827	chr13	+	49549348	49549773	True	NM_030925,NM_001079673	chr13,chr13	-,+	CAB39L,FNDC3A	426019,274
chr18:61142270-61143916	chr18	+	61142349	61143941	True	NM_004869,NM_002639	chr18,chr18	-,+	VPS4B,SERPINB5	-52597,202
chrX:3002065-3002399	chrX	+	3002179	3002397	True	NM_000047,NM_004042	chrX,chrX	-,+	ARSE,ARSF	-119685,-17403
chr1:145477515-145478019	chr1	+	145477710	145478054	True	NM_153713,NM_032305,NM_001039888	chr1,chr1,chr1	+,-,+	LIX1L,POLR3GL,ANKRD34A	-682,-7323,-7259
chr3:99539334-99540508	chr3	+	99539375	99540547	True	NM_014890,NM_032359	chr3,chr3	-,+	FILIP1L,C3orf26	54549,-2758
chr12:49106443-49107984	chr12	+	49106736	49108041	True	NM_001240,NR_029448	chr12,chr12	-,+	CCNT1,LOC255411	2798,13176
chr13:98830088-98830516	chr13	+	98830087	98830313	True	NM_178861,NR_036129	chr13,chr13	-,+	RNF113B,MIR3170	-566,30464
chr7:94139258-94139551	chr7	+	94139393	94139479	True	NM_001099400,NM_022900	chr7,chr7	-,+	SGCE,CASD1	146092,-274
chr7:127292695-127293065	chr7	+	127292740	127293104	True	NM_006193,NM_014390	chr7,chr7	-,+	PAX4,SND1	-36960,-592
chr19:39301834-39302786	chr19	+	39301913	39302834	True	NM_006149,NM_001042507	chr19,chr19	-,+	LGALS4,LGALS7B	956,-22114
chrX:53251683-53253059	chrX	+	53251705	53252959	True	NM_004187,NM_022117,NM_001146702	chrX,chrX,chrX	-,+,-	KDM5C,TSPYL2,KDM5C	1695,-140215,1695
chr19:57651837-57652617	chr19	+	57652134	57652478	True	NM_020903,NM_052882	chr19,chr19	+,-	USP29,ZIM3	-20682,4142
chrY:24449874-24451520	chrY	+	24450125	24451453	True	NR_001541,NR_002193,NM_152585	chrY,chrY,chrY	-,+,+	TTTY5,RBMY2FP,RBMY1F	-5102,3552,3556
chr9:86536575-86537130	chr9	+	86536581	86536678	True	NM_017576,NM_024945	chr9,chr9	-,+	KIF27,RMI1	-239,58958
chr4:25653434-25654756	chr4	+	25653459	25654577	True	NM_015187,NM_001177998,NM_001177999,NM_006424	chr4,chr4,chr4,chr4	-,+,+,+	SEL1L3,SLC34A2,SLC34A2,SLC34A2	210091,2857,3508,2857
chr18:34382882-34384084	chr18	+	34382987	34384006	True	NM_020776,NM_015476	chr18,chr18	+,-	KIAA1328,C18orf10	25073,25202
chr8:21837211-21838002	chr8	+	21837333	21837952	True	NM_003974,NM_182795	chr8,chr8	-,+	DOK2,NPM2	-66128,44401
chr10:118765445-118765797	chr10	+	118765464	118765681	True	NM_018330,NM_181840,NM_001127211	chr10,chr10,chr10	-,+,-	KIAA1598,KCNK18,KIAA1598	-376,191318,-376
chr1:79215392-79215797	chr1	+	79215415	79215809	True	NM_022159,NM_006417	chr1,chr1	-,+	ELTD1,IFI44	256736,-99989
chr20:61476632-61476937	chr20	+	61476753	61476961	True	NM_006602,NM_080750	chr20,chr20	-,+	TCFL5,DPH3P1	16204,-328
chr14:94255730-94256163	chr14	+	94255867	94256201	True	NM_138344,NM_178013	chr14,chr14	+,-	FAM181A,PRIMA1	129056,-1101
chr6:146349977-146350398	chr6	+	146350200	146350411	True	NM_001114329,NM_173082,NM_000838	chr6,chr6,chr6	+,-,+	GRM1,SHPRH,GRM1	-1469,-64967,-1469
chr21:39480699-39481268	chr21	+	39481023	39481223	True	NM_005867,NR_026838	chr21,chr21	-,+	DSCR4,DSCR8	12289,12321
chrX:128871724-128873122	chrX	+	128871914	128872963	True	NM_017413,NM_003399	chrX,chrX	-,+	APLN,XPNPEP2	-82981,-18
chr1:169519796-169520362	chr1	+	169519829	169520351	True	NM_003666,NM_000130	chr1,chr1	+,-	BLZF1,F5	-182694,35468
chr5:114877924-114879139	chr5	+	114877931	114879176	True	NM_020177,NM_001284	chr5,chr5	-,+	FEM1C,AP3S1	1465,298442
chr22:20611217-20611880	chr22	+	20611354	20611830	True	NM_015672,NM_003426	chr22,chr22	-,+	RIMBP3,ZNF74	-149568,136649
chr22:20611217-20611880	chr22	+	25020385	25020435	False	NM_207644,NR_024494	chr22,chr22	-,+	C22orf36,BCRP3	-31350,8446
chr22:20611217-20611880	chr22	-	18765690	18766166	False	NM_005675,NR_003267	chr22,chr22	+,-	DGCR6,GGT3P	127569,13359
chr22:20611217-20611880	chr22	-	21566801	21567119	False	NR_024583,NR_002829	chr22,chr22	+,-	POM121L8P,P2RX6P	69594,-168263
chr16:3355491-3355747	chr16	+	3355538	3355654	True	NM_153028,NM_033208	chr16,chr16	+,-	ZNF75A,TIGD7	-156,-99
chr17:4464292-4465129	chr17	+	4464333	4464745	True	NM_198501,NM_001105538,NM_014520,NM_153338,NM_001122890	chr17,chr17,chr17,chr17,chr17	+,-,-,-,-	SMTNL2,MYBBP1A,MYBBP1A,GGT6,GGT6	22530,-5652,-5652,-457,-457
chr7:71795343-71796054	chr7	+	71795481	71795901	True	NR_001588,NM_001017440	chr7,chr7	+,-	SBDSP1,CALN1	504050,6357
chr20:30868439-30869153	chr20	+	30868548	30869117	True	NM_002657,NM_004798	chr20,chr20	-,+	PLAGL2,KIF3B	-73002,-3153
chr12:92818211-92819993	chr12	+	92818219	92819795	True	NM_001025233,NR_027932,NR_027933,NM_001025232	chr12,chr12,chr12,chr12	+,+,+,-	CLLU1,CLLU1,CLLU1,CLLU1OS	-535,-2963,-2963,2182
chr9:140354389-140354725	chr9	+	140354388	140354714	True	NM_001130971,NM_001130970,NM_006647,NM_001178064,NM_015537,NM_001130969	chr9,chr9,chr9,chr9,chr9,chr9	-,-,+,-,-,-	NELF,NELF,NOXA1,NELF,NELF,NELF	-602,-602,-36592,-602,-602,-602
chr21:44777817-44778070	chr21	+	44777833	44778075	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	91828,68977
chr16:30599258-30599641	chr16	+	30599262	30599627	True	NM_152458,NM_024031	chr16,chr16	-,+	ZNF785,PRR14	-2170,62613
chr11:74302532-74302891	chr11	+	74302588	74302914	True	NM_006591,NM_001144869	chr11,chr11	+,-	POLD3,LIPT2	714,-97833
chr16:22309628-22311211	chr16	+	22309652	22310668	True	NM_018119,NM_001802	chr16,chr16	+,-	POLR3E,CDR2	-962,75320
chr19:42807468-42807821	chr19	+	42807470	42807870	True	NM_199285,NM_173633,NM_002573,NM_001145939,NM_001145940	chr19,chr19,chr19,chr19,chr19	+,+,-,-,-	PRR19,TMEM145,PAFAH1B3,PAFAH1B3,PAFAH1B3	-1237,9606,-674,-541,-518
chr19:44556421-44557380	chr19	+	44556499	44557239	True	NR_033341,NM_013361	chr19,chr19	-,+	LOC100379224,ZNF223	60155,-386
chr2:43452791-43453136	chr2	+	43452835	43453137	True	NR_027251,NM_006887	chr2,chr2	+,-	LOC100129726,ZFP36L2	1212,658
chr8:71487190-71487744	chr8	+	71487194	71487646	True	NM_001011720,NM_014294	chr8,chr8	+,-	XKR9,TRAM1	93953,33102
chr12:66620112-66620376	chr12	+	66620310	66620412	True	NM_016056,NM_007199	chr12,chr12	-,+	TMBIM4,IRAK3	-56503,-37384
chr17:1010414-1010748	chr17	+	1010433	1010740	True	NM_001092,NM_013337	chr17,chr17	-,+	ABR,TIMM22	1635,-110127
chr19:3760965-3761606	chr19	+	3760966	3761532	True	NM_004886,NM_172251	chr19,chr19	-,+	APBA3,MRPL54	191,1132
chr10:93394193-93394518	chr10	+	93394194	93394446	True	NM_025235,NM_005398	chr10,chr10	+,-	TNKS2,PPP1R3C	163704,-1336
chr19:16737089-16738137	chr19	+	16737192	16738127	True	NM_004831,NM_024074	chr19,chr19	-,+	MED26,TMEM38A	938,33810
chr15:56286151-56286972	chr15	+	56286178	56286951	True	NM_198524,NM_006154	chr15,chr15	+,-	TEX9,NEDD4	370692,-343
chr7:150755979-150756278	chr7	+	150755978	150756278	True	NM_001164410,NM_001199693,NM_001199692,NM_003040,NM_004935,NM_001199694	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,-,+	CDK5,SLC4A2,SLC4A2,SLC4A2,CDK5,SLC4A2	-926,3355,-735,378,-926,3460
chr5:156625895-156627538	chr5	+	156626206	156627270	True	NM_130899,NM_005546	chr5,chr5	-,+	FAM71B,ITK	-32927,-18350
chr19:2866621-2867007	chr19	+	2866626	2866892	True	NM_021217,NM_024967	chr19,chr19	-,+	ZNF77,ZNF556	78127,440
chr2:172778345-172778863	chr2	+	172778344	172778836	True	NR_027862,NM_003705,NM_003642	chr2,chr2,chr2	+,-,+	HAT1,SLC25A12,HAT1	98,-27531,98
chr14:75744205-75744568	chr14	+	75744310	75744542	True	NM_006827,NM_005252	chr14,chr14	-,+	TMED10,FOS	-100961,938
chr5:770911-771233	chr5	+	770911	771277	True	NM_001166260,NM_007030	chr5,chr5	+,-	TRIP13,TPPP	121691,-77401
chr5:770911-771233	chr5	+	679017	679167	False	NM_018140,NM_007030	chr5,chr5	+,-	CEP72,TPPP	-66663,14393
chr7:45806971-45807485	chr7	+	45807116	45807534	True	NR_024271,NM_000596	chr7,chr7	-,+	SEPT7P2,IGFBP1	1133,120424
chr7:45806971-45807485	chr10	+	38690359	38690750	False	NR_027269,NR_024497	chr10,chr10	-,+	SEPT7L,LOC399744	1421,26323
chr7:45806971-45807485	chr1	-	714967	715245	False	NR_033908,NR_015368	chr1,chr1	-,+	LOC100288069,LOC643837	-899,47818
chr14:21134201-21135786	chr14	+	21135210	21135746	True	NM_001145,NM_001001968	chr14,chr14	+,-	ANG,OR6S1	16589,-25360
chr16:576326-576754	chr16	+	576334	576766	True	NM_005632,NR_024121	chr16,chr16	+,-	SOLH,NCRNA00235	1089,691
chr4:86949902-86951642	chr4	+	86949998	86951450	True	NM_031305,NM_138981	chr4,chr4	+,-	ARHGAP24,MAPK10	-98624,77415
chr2:38821171-38822706	chr2	+	38821357	38822709	True	NM_001142650,NM_138801,NM_138394	chr2,chr2,chr2	-,+,-	HNRPLL,GALM,HNRPLL	7519,70342,7519
chr7:26317459-26317830	chr7	+	26317544	26317699	True	NM_031243,NM_001199835	chr7,chr7	-,+	HNRNPA2B1,SNX10	-77131,13815
chr2:204399862-204400137	chr2	+	204399915	204400181	True	NM_203365,NM_213589,NM_006139	chr2,chr2,chr2	-,-,+	RAPH1,RAPH1,CD28	-21,-21,171016
chr18:65151903-65153232	chr18	+	65151911	65153201	True	NM_032160,NR_033921	chr18,chr18	-,+	DSEL,LOC643542	30816,30581
chr5:14146325-14146814	chr5	+	14146334	14146758	True	NM_001369,NM_007118	chr5,chr5	-,+	DNAH5,TRIO	-201745,-2558
chr7:126986951-126987620	chr7	+	126986964	126987632	True	NM_001662,NM_176814	chr7,chr7	+,-	ARF5,ZNF800	240773,45185
chr18:70211972-70213392	chr18	+	70212009	70213062	True	NM_014177,NM_182511	chr18,chr18	+,-	C18orf55,CBLN2	1602683,-286
chr17:38971898-38973148	chr17	+	38971933	38973153	True	NM_145274,NM_000421,NM_001195387,NM_001195386	chr17,chr17,chr17,chr17	+,-,+,+	TMEM99,KRT10,TMEM99,TMEM99	2220,5765,2190,2283
chrX:24665880-24666823	chrX	+	24666000	24666693	True	NM_001163265,NM_016937,NM_004845	chrX,chrX,chrX	-,+,-	PCYT1B,POLA1,PCYT1B	-545,45370,-545
chr11:47398366-47398764	chr11	+	47398456	47398786	True	NM_003120,NM_001128225,NM_001080547	chr11,chr11,chr11	-,+,-	SPI1,SLC39A13,SPI1	1391,31259,1391
chr9:132427187-132427416	chr9	+	132427195	132427381	True	NM_016307,NM_177999	chr9,chr9	+,-	PRRX2,ASB6	538,-22747
chr10:100176441-100177356	chr10	+	100176496	100177096	True	NM_014472,NM_032709	chr10,chr10	+,-	C10orf28,PYROXD2	-282166,-1518
chr1:50792133-50792480	chr1	+	50792143	50792459	True	NM_021952,NM_032110	chr1,chr1	+,-	ELAVL4,DMRTA2	-217600,96732
chrX:54821557-54822838	chrX	+	54821594	54822668	True	NM_177433,NM_198510	chrX,chrX	+,-	MAGED2,ITIH5L	11502,2055
chr7:139873886-139874491	chr7	+	139874052	139874406	True	NM_030647,NR_024451	chr7,chr7	-,+	JHDM1D,LOC100134229	2393,2654
chr12:123596304-123597176	chr12	+	123596467	123597041	True	NM_020845,NM_152269	chr12,chr12	-,+	PITPNM2,C12orf65	-1492,120802
chr15:74612533-74612812	chr15	+	74612550	74612804	True	NM_001099773,NM_182791	chr15,chr15	-,+	CYP11A1,CCDC33	45799,-1701
chr5:148931408-148931612	chr5	+	148931492	148931595	True	NM_001892,NM_001001669,NM_001025105	chr5,chr5,chr5	-,+,-	CSNK1A1,ARHGEF37,CSNK1A1	-485,29539,-485
chr5:107608764-107609983	chr5	+	107609084	107609956	True	NM_005246,NM_001163315	chr5,chr5	+,-	FER,FBXL17	473566,107893
chr5:107608764-107609983	chr2	+	22124023	22124506	False	NM_182828,NM_000384	chr2,chr2	+,-	GDF7,APOB	-1257650,-857078
chr19:53031283-53031580	chr19	+	53031460	53031608	True	NM_001039886,NM_001105549	chr19,chr19	+,-	ZNF808,ZNF83	-602,110086
chr2:54751056-54752466	chr2	+	54751418	54752484	True	NR_002229,NM_001003937	chr2,chr2	+,-	RPL23AP32,TSPYL6	3874,-268009
chr5:140749974-140750993	chr5	+	140750027	140750798	True	NM_018924,NM_032086,NM_032097,NM_032054,NM_018918,NM_018919,NM_005642	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,-	PCDHGB3,PCDHGA6,PCDHGB3,PCDHGA5,PCDHGA5,PCDHGA6,TAF7	-116,2852,-116,-6180,-6180,2852,-49676
chr2:86851080-86851614	chr2	+	86851135	86851630	True	NM_022780,NM_001198952,NM_001198951,NM_005667	chr2,chr2,chr2,chr2	+,-,-,-	RMND5A,RNF103,RNF103,RNF103	95783,-135,-135,-135
chr5:45561900-45563271	chr5	+	45561917	45562971	True	NM_021072,NM_016640	chr5,chr5	-,+	HCN1,MRPS30	133308,-752949
chr19:15796201-15796659	chr19	+	15796203	15796665	True	NM_023944,NR_033864	chr19,chr19	+,-	CYP4F12,CYP4F24P	-12369,94183
chr12:127651312-127652619	chr12	+	127651726	127652471	True	NR_033970,NR_033987	chr12,chr12	-,+	LOC440117,FLJ37505	-292490,713690
chr3:73108940-73109245	chr3	+	73109154	73109259	True	NM_018029,NM_018130	chr3,chr3	+,-	EBLN2,SHQ1	1550,-211556
chr21:30444239-30445301	chr21	+	30444458	30445350	True	NM_006585,NM_020152	chr21,chr21	-,+	CCT8,C21orf7	710,7522
chrX:49832146-49832456	chrX	+	49832175	49832447	True	NM_139289,NM_000084	chrX,chrX	-,+	AKAP4,CLCN5	132607,-11
chr1:157105447-157106133	chr1	+	157105492	157106166	True	NM_001145312,NR_001560,NM_005240	chr1,chr1,chr1	-,+,-	ETV3,CYCSP52,ETV3	2267,-7398,2061
chr1:1311689-1311973	chr1	+	1311705	1311945	True	NM_001127230,NM_017900,NM_001127229,NR_015434	chr1,chr1,chr1,chr1	-,-,-,+	AURKAIP1,AURKAIP1,AURKAIP1,LOC148413	-1143,-887,-1125,22964
chr5:126336784-126338590	chr5	+	126336941	126338633	True	NM_001198557,NM_178450	chr5,chr5	+,-	LMNB1,MARCH3	-224151,27857
chr2:128294087-128295626	chr2	+	128294270	128295496	True	NM_017969,NM_001080527	chr2,chr2	-,+	IWS1,MYO7B	-10183,-949
chr18:25758172-25758435	chr18	+	25758199	25758425	True	NR_026908,NM_001792	chr18,chr18	+,-	C18orf16,CDH2	-1312978,-754
chr15:52585244-52585952	chr15	+	52585294	52585952	True	NM_018728,NM_002748	chr15,chr15	-,+	MYO5C,MAPK6	2093,-273941
chr6:130541237-130542089	chr6	+	130541532	130541760	True	NM_032438,NM_001017373,NM_152552	chr6,chr6,chr6	+,-,-	L3MBTL3,SAMD3,SAMD3	-201860,2403,-5038
chr6:42532683-42533203	chr6	+	42532693	42533217	True	NM_015255,NM_001184801,NM_033502	chr6,chr6,chr6	+,+,-	UBR2,UBR2,TRERF1	-992,-992,-112910
chr19:3539156-3539417	chr19	+	3539160	3539394	True	NM_001135580,NM_001042680	chr19,chr19	+,-	C19orf71,C19orf28	-56,18227
chr20:44512470-44513159	chr20	+	44512611	44512957	True	NM_080749,NM_080608,NM_001167594,NM_080603,NM_000308,NM_001127695	chr20,chr20,chr20,chr20,chr20,chr20	-,-,+,+,+,+	NEURL2,C20orf165,CTSA,ZSWIM1,CTSA,CTSA	6998,3335,6633,-2814,6633,6633
chr9:44761524-44761942	chr9	+	44761925	44761991	True	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	228244,-1131195
chr5:5392999-5393255	chr5	+	5393044	5393130	True	NM_015325,NR_028351	chr5,chr5	+,-	KIAA0947,FLJ33360	29676,944325
chr17:38811956-38813386	chr17	+	38812199	38812775	True	NM_152349,NM_001195387,NM_003079	chr17,chr17,chr17	-,+,-	KRT222,TMEM99,SMARCE1	8691,162568,-8096
chr17:76781392-76782434	chr17	+	76781483	76782083	True	NM_017456,NM_030968,NM_004762	chr17,chr17,chr17	-,+,-	CYTH1,C1QTNF1,CYTH1	-3107,238167,-3107
chrX:109549445-109549808	chrX	+	109549615	109549684	True	NM_020769,NM_001025580	chrX,chrX	+,-	RGAG1,AMMECR1	112600,11751
chr11:33036488-33036727	chr11	+	33036614	33036781	True	NM_139160,NM_001077242,NM_001326	chr11,chr11,chr11	+,+,-	DEPDC7,DEPDC7,CSTF3	946,628,146311
chr3:97882923-97884244	chr3	+	97882980	97883989	True	NM_001105580,NM_001005515	chr3,chr3	-,+	GABRR3,OR5H15	-129149,3554
chr14:70234043-70234250	chr14	+	70234049	70234269	True	NM_001039465,NR_029378,NM_006925	chr14,chr14,chr14	+,-,+	SRSF5,LOC100289511,SRSF5	-271,211,-266
chr16:738378-739114	chr16	+	738630	739106	True	NM_032259,NM_005861,NM_001005920	chr16,chr16,chr16	-,+,-	WDR24,STUB1,JMJD8	1344,-8566,-4191
chr1:10460231-10460568	chr1	+	10460246	10460487	True	NM_004401,NM_002631	chr1,chr1	-,+	DFFA,PGD	72183,-1212
chr1:153652562-153652836	chr1	+	153652568	153652881	True	NM_004515,NM_000906	chr1,chr1	-,+	ILF2,NPR1	-9089,-1455
chr2:2327829-2328218	chr2	+	2327848	2328170	True	NR_024468,NM_015025	chr2,chr2	+,-	LOC730811,MYT1L	-4895,6925
chr17:79341777-79342010	chr17	+	79341976	79342046	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	31493,-37502
chr20:37076370-37077558	chr20	+	37076411	37077445	True	NR_003239,NR_002972,NR_002986,NR_027241	chr20,chr20,chr20,chr20	+,+,+,-	SNHG11,SNORA39,SNORA60,LOC388796	-1165,-36,566,-12393
chr19:30305372-30306694	chr19	+	30305402	30306474	True	NM_001238,NM_057182,NM_031448	chr19,chr19,chr19	+,+,-	CCNE1,CCNE1,C19orf12	-2560,-1900,-98950
chr6:28556920-28557668	chr6	+	28557108	28557533	True	NM_052923,NM_003996	chr6,chr6	-,+	SCAND3,GPX5	-1996,-63370
chr6:28556920-28557668	chr6_cox_hap2	+	79312	79737	False	NM_052923,NM_003996	chr6_cox_hap2,chr6_cox_hap2	-,+	SCAND3,GPX5	-1996,-63370
chr17:4708966-4710024	chr17	+	4709414	4709947	True	NM_002663,NM_182566	chr17,chr17	+,-	PLD2,VMO1	473,-19685
chr19:6396142-6396399	chr19	+	6396251	6396447	True	NM_002096,NM_032306	chr19,chr19	-,+	GTF2F1,ALKBH7	-2960,-23858
chrX:70121983-70123566	chrX	+	70122934	70123571	True	NM_001003811,NM_001170931,NM_031276	chrX,chrX,chrX	-,+,-	TEX11,FOXO4,TEX11	5047,192427,5047
chr12:49462773-49463078	chr12	+	49462803	49463107	True	NM_144593,NM_005430	chr12,chr12	-,+	RHEBL1,WNT1	718,-90618
chr9:112971648-112972912	chr9	+	112971752	112972927	True	NM_001136562,NM_001012993	chr9,chr9	+,-	AKAP2,C9orf152	-84029,-1339
chr5:147287965-147288352	chr5	+	147287983	147288400	True	NM_054023,NM_206966	chr5,chr5	+,-	SCGB3A2,C5orf46	-29773,-1882
chr20:23616203-23617022	chr20	+	23616215	23616945	True	NM_000099,NR_001279	chr20,chr20	-,+	CST3,CSTT	1679,-116483
chr19:39339711-39339974	chr19	+	39339717	39340023	True	NM_001001716,NM_001533,NM_001005335	chr19,chr19,chr19	+,-,-	NFKBIB,HNRNPL,HNRNPL	50591,644,3006
chr8:145559625-145559846	chr8	+	145559698	145559822	True	NM_024531,NM_012079,NM_031309	chr8,chr8,chr8	+,-,-	GPR172A,DGAT1,SCRT1	22402,-9131,171
chr4:25161945-25162351	chr4	+	25161986	25162389	True	NR_037934,NM_016955	chr4,chr4	+,-	LOC285540,SEPSECS	-38,11
chr1:118148595-118148943	chr1	+	118148724	118148790	True	NM_017686,NM_017709	chr1,chr1	-,+	GDAP2,FAM46C	323562,-171
chr5:175224856-175225066	chr5	+	175224870	175225084	True	NM_032361,NM_006650	chr5,chr5	-,+	THOC3,CPLX2	170511,-1311
chr3:142898012-142898959	chr3	+	142898105	142898709	True	NM_004267,NR_034032	chr3,chr3	+,-	CHST2,LOC100289361	-59495,-177796
chr5:68859026-68859692	chr5	+	68859420	68859610	True	NR_027439,NM_001042490,NM_001098728	chr5,chr5,chr5	-,+,+	LOC100272216,GTF2H2D,GTF2H2C	69476,-3403,-3426
chr5:68859026-68859692	chr5	-	70359941	70360131	False	NM_022877,NM_001515	chr5,chr5	+,-	SMN2,GTF2H2	-139232,3422
chr5:68859026-68859692	chr5	+	69714566	69714756	False	NR_033417,NR_033968	chr5,chr5	+,-	GTF2H2B,LOC100049076	-3426,136452
chr20:35503981-35504555	chr20	+	35504035	35504381	True	NM_080628,NM_080627	chr20,chr20	+,-	C20orf118,KIAA0889	188,-11948
chr17:78161857-78162275	chr17	+	78161863	78162257	True	NM_000199,NM_052819,NM_024110	chr17,chr17,chr17	-,+,+	SGSH,CARD14,CARD14	31992,-315,-9633
chr9:117692513-117693069	chr9	+	117692604	117693118	True	NM_017418,NM_001244	chr9,chr9	+,-	DEC1,TNFSF8	210978,-18
chr10:106139941-106140830	chr10	+	106139945	106140462	True	NM_001008723,NM_033397	chr10,chr10	+,-	CCDC147,ITPRIP	-26474,-46282
chr21:45978165-45978480	chr21	+	45959437	46011903	True	NM_198689,NM_198693,NM_198687,NM_198691,NM_198696	chr21,chr21,chr21,chr21,chr21	+,-,+,-,-	KRTAP10-7,KRTAP10-2,KRTAP10-4,KRTAP10-1,KRTAP10-3	8593,-6836,15289,641,377
chr21:45978165-45978480	chr21	+	45970748	45971236	False	NM_198696,NM_198687,NM_198693	chr21,chr21,chr21	-,+,-	KRTAP10-3,KRTAP10-4,KRTAP10-2	7895,22369,640
chr15:93014968-93015210	chr15	+	93015021	93015259	True	NR_021493,NM_153040	chr15,chr15	-,+	LOC100144604,C15orf32	100284,-165
chr6:139604300-139604567	chr6	+	139604300	139604413	True	NM_153235,NM_016217	chr6,chr6	-,+	TXLNB,HECA	8850,-148104
chr7:158501518-158501928	chr7	+	158501519	158501852	True	NM_017760,NM_018051	chr7,chr7	-,+	NCAPG2,WDR60	-3999,147416
chr13:22245477-22246126	chr13	+	22245525	22246116	True	NM_152726,NM_002010	chr13,chr13	-,+	EFHA1,FGF9	-67170,-362
chr13:51797739-51798529	chr13	+	51797776	51798310	True	NR_003923,NM_145019	chr13,chr13	-,+	GUCY1B2,FAM124A	-157483,-1320
chr18:32276464-32277624	chr18	+	32276565	32277446	True	NM_001198941,NM_003787	chr18,chr18	+,-	DTNA,NOL4	12749,-473050
chr19:8840457-8840872	chr19	+	8840526	8840710	True	NM_178525,NM_001004699	chr19,chr19	-,+	ACTL9,OR2Z1	-31354,680
chr10:1101907-1102377	chr10	+	1102101	1102219	True	NM_004508,NM_014023	chr10,chr10	-,+	IDI1,WDR37	-7040,556
chr9:132806278-132806622	chr9	+	132806316	132806626	True	NM_001136557,NM_001136558,NM_020960,NM_015033	chr9,chr9,chr9,chr9	+,+,+,-	GPR107,GPR107,GPR107,FNBP1	9358,9358,9358,-843
chr8:6875879-6877412	chr8	+	6876127	6877391	True	NM_005217,NR_036686,NR_036687,NM_001164452,NM_001042500,NM_004084	chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,+,-,-	DEFA3,DEFT1P,DEFT1P2,FAM90A14,DEFA1B,DEFA1	-311,-9781,-9781,237034,-304,-304
chr13:21750330-21750544	chr13	+	21750330	21750566	True	NM_001166017,NM_145061,NM_024026	chr13,chr13,chr13	-,-,+	SKA3,SKA3,MRP63	225,225,-9
chr8:67684886-67685288	chr8	+	67685183	67685327	True	NR_002734,NM_013257,NM_170709	chr8,chr8,chr8	-,+,+	PTTG3P,SGK3,SGK3	-4943,2088,2088
chr6:18122729-18123197	chr6	+	18122751	18123102	True	NM_153042,NM_198586	chr6,chr6	+,-	KDM1B,NHLRC1	32516,100
chr10:125429088-125429290	chr10	+	125429108	125429316	True	NM_198148,NM_153442	chr10,chr10	-,+	CPXM2,GPR26	222234,-3288
chr16:18585410-18586232	chr16	+	18585533	18586217	True	NR_003569,NM_173614	chr16,chr16	+,-	ABCC6P1,NOMO2	-3014,-12099
chr16:18585410-18586232	chr16	-	14914907	14915343	False	NR_023387,NM_014287	chr16,chr16	-,+	ABCC6P2,NOMO1	3266,12299
chr16:18585410-18586232	chr16	-	16313669	16314353	False	NM_001171,NM_001079528,NM_001004067	chr16,chr16,chr16	-,-,+	ABCC6,ABCC6,NOMO3	3025,3025,12035
chr1:234743413-234744252	chr1	+	234743624	234744046	True	NR_033927,NM_001077397,NM_182972	chr1,chr1,chr1	+,-,-	NCRNA00184,IRF2BP2,IRF2BP2	21010,1275,1275
chr22:38244261-38244561	chr22	+	38244265	38244399	True	NR_030395,NM_138797,NM_016091,NR_030396,NR_036556	chr22,chr22,chr22,chr22,chr22	-,-,+,-,-	MIR658,ANKRD54,EIF3L,MIR659,ANKRD54	-3887,-3912,970,-484,-3912
chr1:24530107-24531276	chr1	+	24530185	24530976	True	NM_173065,NR_027087	chr1,chr1	-,+	IL28RA,LOC284632	-16420,-3506
chr14:24036736-24037184	chr14	+	24037090	24037206	True	NR_023314,NM_003917	chr14,chr14	+,-	THTPA,AP1G2	-11943,123
chr16:67429407-67430238	chr16	+	67429421	67430029	True	NM_016140,NM_015964,NM_000196	chr16,chr16,chr16	-,-,+	TPPP3,TPPP3,HSD11B2	-2000,-2000,35006
chr1:26149544-26150223	chr1	+	26149566	26150238	True	NM_019557,NR_024498,NM_001099625,NM_001099627,NM_001099626	chr1,chr1,chr1,chr1,chr1	+,-,+,+,+	FAM54B,LOC646471,FAM54B,FAM54B,FAM54B	-2933,-7,-3220,-3220,-2298
chr3:74466061-74467583	chr3	+	74466158	74467308	True	NR_031714,NM_020872	chr3,chr3	+,-	MIR1324,CNTN3	1212605,103085
chr15:25226195-25226504	chr15	+	25226312	25226406	True	NR_022008,NR_022011,NM_130838,NR_001292,NR_001293,NR_001294	chr15,chr15,chr15,chr15,chr15,chr15	+,+,-,+,+,+	PAR5,PAR-SN,UBE3A,SNORD108,SNORD107,SNORD64	3600,734,424309,5665,734,3840
chr19:33557310-33557612	chr19	+	33557312	33557478	True	NM_033103,NM_018025	chr19,chr19	-,+	RHPN2,GPATCH1	-1488,14307
chr7:134140493-134141109	chr7	+	134140608	134140924	True	NM_001628,NM_020299	chr7,chr7	-,+	AKR1B1,AKR1B10	3016,71419
chr17:15222972-15224372	chr17	+	15223057	15224279	True	NM_031898,NR_033371	chr17,chr17	-,+	TEKT3,CDRT7	20735,-288816
chr5:893505-894377	chr5	+	893535	894344	True	NM_004237,NR_027633,NM_001009877,NM_023924,NM_001166260	chr5,chr5,chr5,chr5,chr5	+,-,-,-,+	TRIP13,BRD9,BRD9,BRD9,TRIP13	-617,-596,-861,-596,-617
chr17:8648994-8649197	chr17	+	8648995	8649175	True	NM_001158261,NM_004822,NM_144681	chr17,chr17,chr17	-,+,-	CCDC42,NTN1,CCDC42	-841,275683,-841
chr6:106956598-106957505	chr6	+	106956724	106957503	True	NM_032730,NM_001624	chr6,chr6	-,+	RTN4IP1,AIM1	119920,2226
chr7:151717744-151718265	chr7	+	151717796	151718175	True	NM_022087,NM_016203	chr7,chr7	+,-	GALNT11,PRKAG2	4602,-143480
chr22:51222423-51222727	chr22	+	51222490	51222766	True	NM_001003789,NM_001130919,NM_001130920,NM_001130921,NM_001130922,NM_001130923	chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,-,-	RABL2B,RABL2B,RABL2B,RABL2B,RABL2B,RABL2B	-403,-403,-403,-403,-403,-403
chr6:89922358-89922684	chr6	+	89922528	89922732	True	NM_001010853,NM_002042	chr6,chr6	+,-	PM20D2,GABRR1	-66812,4814
chr6:121651541-121652513	chr6	+	121651603	121652214	True	NM_152730,NM_000165	chr6,chr6	-,+	C6orf170,GJA1	3492,104530
chr20:36889067-36889382	chr20	+	36889098	36889176	True	NM_001029864,NM_001725	chr20,chr20	-,+	KIAA1755,BPI	48,43375
chr6:10020254-10021121	chr6	+	10020253	10021126	True	NM_001032280,NR_033910	chr6,chr6	-,+	TFAP2A,LOC100130275	391532,391424
chr10:51550825-51551319	chr10	+	51550895	51551222	True	NM_001077685,NM_138634,NM_002443	chr10,chr10,chr10	-,+,+	AGAP7,MSMB,MSMB	-64568,-1393,-1393
chr1:167521659-167522138	chr1	+	167521812	167522005	True	NM_003851,NM_052862	chr1,chr1	-,+	CREG1,RCSD1	1102,77468
chr1:9714758-9715047	chr1	+	9714785	9714847	True	NR_027045,NM_005026	chr1,chr1	-,+	C1orf200,PIK3CD	-141,-3046
chr14:21908524-21909970	chr14	+	21908838	21909776	True	NM_020920,NM_014828,NM_001170629	chr14,chr14,chr14	-,+,-	CHD8,TOX4,CHD8	-3381,35558,-8971
chr1:207644464-207645516	chr1	+	207644481	207645235	True	NR_029832,NM_001877	chr1,chr1	-,+	MIR29C,CR2	330099,-16887
chr6:139352246-139352663	chr6	+	139352320	139352719	True	NM_031922,NM_021243	chr6,chr6	-,+	REPS1,C6orf115	-42922,-2565
chr13:53191761-53192035	chr13	+	53191781	53192069	True	NM_001011724,NM_001011725,NM_001011705	chr13,chr13,chr13	+,+,-	HNRNPA1L2,HNRNPA1L2,LECT1	-227,-227,121928
chr3:119266549-119267603	chr3	+	119266669	119267503	True	NM_005191,NM_001125	chr3,chr3	-,+	CD80,ADPRH	11028,31019
chr17:29249807-29250373	chr17	+	29249987	29250263	True	NM_024683,NM_018404	chr17,chr17	-,+	C17orf42,ADAP2	-16701,-1284
chr7:96642318-96642674	chr7	+	96642355	96642589	True	NM_005222,NR_015448	chr7,chr7	+,-	DLX6,DLX6-AS1	-7124,838
chr7:144532491-144532819	chr7	+	144532496	144532800	True	NM_005435,NM_022445,NM_001042482	chr7,chr7,chr7	+,-,-	ARHGEF5,TPK1,TPK1	-480058,396,396
chr3:42199780-42200373	chr3	+	42199789	42200065	True	NM_014965,NM_001174138	chr3,chr3	+,-	TRAK1,CCK	1595,105432
chrX:13336169-13337140	chrX	+	13336329	13337135	True	NM_001167890,NM_001135995	chrX,chrX	+,-	EGFL6,ATXN3L	250558,1433
chr17:74637814-74638978	chr17	+	74637813	74638609	True	NM_018414,NR_004395	chr17,chr17	-,+	ST6GALNAC1,SNORD1A	1335,-80149
chr20:33559488-33559864	chr20	+	33559519	33559693	True	NM_000178,NM_020884	chr20,chr20	-,+	GSS,MYH7B	-15918,-15866
chr11:35521115-35522906	chr11	+	35521210	35522170	True	NM_014344,NM_001001991	chr11,chr11	+,-	FJX1,PAMR1	117564,25056
chr10:112398964-112399992	chr10	+	112399413	112399871	True	NR_026932,NM_001134363	chr10,chr10	-,+	LOC282997,RBM20	230841,4283
chr19:41595705-41595988	chr19	+	41595767	41595843	True	NM_030589,NM_000766	chr19,chr19	-,+	CYP2A7,CYP2A13	-207110,-1450
chr13:34444801-34445662	chr13	+	34444981	34445699	True	NM_181558,NM_178006	chr13,chr13	+,-	RFC3,STARD13	-52837,-585080
chr8:145139397-145139701	chr8	+	145139426	145139686	True	NM_030974,NM_019037,NM_003801	chr8,chr8,chr8	-,+,+	SHARPIN,EXOSC4,GPAA1	19504,-5955,-1953
chr9:116160774-116161781	chr9	+	116160780	116161581	True	NM_152786,NM_000031	chr9,chr9	+,-	C9orf43,ALAD	11440,2088
chr2:105943030-105944538	chr2	+	105943196	105944577	True	NM_001142621,NM_004257,NM_024093	chr2,chr2,chr2	-,-,+	TGFBRAP1,TGFBRAP1,C2orf49	1621,1621,9435
chr8:6877412-6878146	chr8	+	6877430	6878194	True	NM_001042500,NM_004084,NM_005217,NM_001164452	chr8,chr8,chr8,chr8	-,-,-,+	DEFA1B,DEFA1,DEFA3,FAM90A14	-1607,-1607,-1614,236231
chr17:1184401-1184902	chr17	+	1184401	1184773	True	NM_001159746,NM_172367	chr17,chr17	-,+	ABR,TUSC5	-93785,-1498
chr8:120218714-120219434	chr8	+	120218900	120219472	True	NM_052886,NM_002546	chr8,chr8	+,-	MAL2,TNFRSF11B	1137,-254517
chr17:76221879-76222785	chr17	+	76222238	76222626	True	NM_001204210,NR_002219,NM_001204211,NM_001204212	chr17,chr17,chr17,chr17	+,-,+,+	TMEM235,EPR1,TMEM235,TMEM235	4764,-1455,4764,4764
chr15:89765456-89766567	chr15	+	89765513	89766428	True	NM_001113378,NM_000326	chr15,chr15	+,-	FANCI,RLBP1	20765,-591
chr22:38005287-38005856	chr22	+	38005336	38005890	True	NM_001172688,NM_013365,NM_001172687,NM_006498,NM_001001561,NM_001001560	chr22,chr22,chr22,chr22,chr22,chr22	+,+,+,-,+,+	GGA1,GGA1,GGA1,LGALS2,GGA1,GGA1	-340,-906,-906,-29312,-906,-906
chr1:9294304-9294556	chr1	+	9294391	9294493	True	NM_004285,NR_029610	chr1,chr1	+,-	H6PD,MIR34A	369,-82555
chr3:24145716-24146094	chr3	+	24145719	24145943	True	NM_001145425,NR_026834	chr3,chr3	+,-	NR1D2,LOC152024	-158158,-981
chr3:36433152-36434152	chr3	+	36433295	36433833	True	NM_003149,NM_033403	chr3,chr3	+,-	STAC,DCLK3	-11250,347577
chr19:17328340-17328575	chr19	+	17328347	17328427	True	NM_005234,NM_024578,NM_018467	chr19,chr19,chr19	-,+,+	NR2F6,OCEL1,USE1	27774,8627,-2243
chr17:29056339-29057584	chr17	+	29056481	29057583	True	NM_015986,NR_024187	chr17,chr17	-,+	CRLF3,SUZ12P	94245,-19906
chr20:60982765-60982974	chr20	+	60982783	60982997	True	NM_001024,NM_031215	chr20,chr20	+,-	RPS21,CABLES2	-20713,-444
chr18:29786103-29786514	chr18	+	29786150	29786398	True	NM_005925,NM_014939	chr18,chr18	+,-	MEP1B,TRAPPC8	-16224,-263059
chr3:38178559-38178882	chr3	+	38178564	38178924	True	NM_001172566,NM_001172567,NR_024024,NM_001172568,NM_001172569,NM_001130410,NM_001607,NM_002468	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,-,+,+,-,-,+	MYD88,MYD88,ACAA1,MYD88,MYD88,ACAA1,ACAA1,MYD88	1044,1044,-27,1044,1044,-27,-27,1044
chr2:74121221-74122261	chr2	+	74121300	74122016	True	NM_001199893,NM_001615,NM_003584	chr2,chr2,chr2	+,+,-	ACTG2,ACTG2,DUSP11	-1258,-1258,-114016
chr1:36772757-36773845	chr1	+	36772806	36773756	True	NM_001162530,NM_024676,NM_018166	chr1,chr1,chr1	+,+,-	SH3D21,SH3D21,FAM176B	-863,-149,16049
chr1:193029268-193029897	chr1	+	193029300	193029934	True	NM_001173525,NM_001173524,NM_001199262,NM_001199263,NM_001199261,NM_015984,NR_033393,NM_004600,NM_001042369,NM_001042370	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,-,-,-,+,+,+,+	TROVE2,TROVE2,UCHL5,UCHL5,UCHL5,UCHL5,TROVE2,TROVE2,TROVE2,TROVE2	-347,-799,-777,-777,-777,-777,-799,-347,-347,-347
chr16:57518878-57519831	chr16	+	57519074	57519830	True	NM_018110,NM_032940	chr16,chr16	-,+	DOK4,POLR2C	605,-22574
chr15:52589377-52591221	chr15	+	52589563	52591212	True	NM_018728,NM_002748	chr15,chr15	-,+	MYO5C,MAPK6	-1568,-278216
chr11:299746-300123	chr11	+	299849	300027	True	NM_006435,NM_001025295	chr11,chr11	+,-	IFITM2,IFITM5	8079,-323
chr19:49139484-49139823	chr19	+	49139488	49139552	True	NM_001217,NM_001352,NR_004401	chr19,chr19,chr19	-,-,+	CA11,DBP,SEC1	9949,1137,1743
chr2:20849462-20850282	chr2	+	20849702	20850104	True	NM_022460,NM_182828	chr2,chr2	-,+	HS1BP3,GDF7	810,16319
chr22:50530701-50531623	chr22	+	50531111	50531318	True	NM_139202,NM_018995,NM_015166,NM_001164105,NM_001164104	chr22,chr22,chr22,chr22,chr22	-,+,-,+,+	MLC1,MOV10L1,MLC1,MOV10L1,MOV10L1	-7330,-2738,-6753,-2488,-2738
chr19:56267350-56268180	chr19	+	56267461	56268165	True	NM_001145014,NM_176820	chr19,chr19	+,-	RFPL4A,NLRP9	2341,-17693
chr3:50649716-50649924	chr3	+	50649722	50649970	True	NM_013324,NM_145071,NM_004635	chr3,chr3,chr3	-,-,+	CISH,CISH,MAPKAPK3	-460,-460,4630
chr2:166160811-166162538	chr2	+	166161043	166162390	True	NM_006922,NM_001040143	chr2,chr2	-,+	SCN3A,SCN2A	-100466,-8824
chr7:127878455-127879669	chr7	+	127878509	127879361	True	NM_000230,NM_001166135	chr7,chr7	+,-	LEP,RBM28	1969,104651
chr9:108213111-108213533	chr9	+	108213111	108213587	True	NM_001145313,NM_031919,NM_207647,NM_005502	chr9,chr9,chr9,chr9	+,+,+,-	FSD1L,FSD1L,FSD1L,ABCA1	-2852,-2852,-2842,-522584
chr8:17106077-17107046	chr8	+	17106230	17107081	True	NM_152415,NM_013354,NM_001145152,NM_054026	chr8,chr8,chr8,chr8	+,-,+,-	VPS37A,CNOT7,VPS37A,CNOT7	-1887,-1843,-1887,-1843
chr15:102030441-102031715	chr15	+	102030773	102031755	True	NM_002570,NM_001005326,NM_138324,NM_138319,NM_138325,NM_138322,NM_138323,NM_138320,NM_138321	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,+,-,-,-,-,-,-,-	PCSK6,OR4F6,PCSK6,PCSK6,PCSK6,PCSK6,PCSK6,PCSK6,PCSK6	-586,314167,-586,-586,-586,-586,-586,-586,-586
chr1:203020549-203022380	chr1	+	203020598	203022342	True	NM_015053,NM_002479	chr1,chr1	+,-	PPFIA4,MYOG	-338,33093
chrX:151548400-151549217	chrX	+	151548529	151549131	True	NM_018558,NR_029521	chrX,chrX	+,-	GABRQ,MIR105-1	257505,11696
chr11:10829106-10829407	chr11	+	10829121	10829329	True	NR_034137,NM_001418,NR_004403,NM_001042559,NM_001172705	chr11,chr11,chr11,chr11,chr11	+,-,-,-,-	LOC729013,EIF4G2,SNORD97,EIF4G2,EIF4G2	50434,1303,-5966,1303,264
chr2:99348155-99349106	chr2	+	99348289	99348986	True	NM_012214,NM_014044	chr2,chr2	-,+	MGAT4A,UNC50	-700,-123298
chr4:156588097-156588535	chr4	+	156588101	156588529	True	NM_000856,NM_001130685,NM_001130684,NM_001130687,NM_001130686,NM_001130683,NM_001130682,NM_017419	chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4	+,+,+,+,+,+,+,-	GUCY1A3,GUCY1A3,GUCY1A3,GUCY1A3,GUCY1A3,GUCY1A3,GUCY1A3,ACCN5	-290,-3,285,-290,-290,-3,-290,198946
chr6:94127623-94128316	chr6	+	94127744	94128154	True	NR_015362,NM_004440	chr6,chr6	+,-	TSG1,EPHA7	288646,1196
chr5:150042176-150043362	chr5	+	150042250	150043123	True	NM_001122853,NM_018047,NM_133371	chr5,chr5,chr5	+,-,+	MYOZ3,RBM22,MYOZ3	-1899,37605,-1899
chr15:71096428-71096904	chr15	+	71096437	71096953	True	NM_018003,NM_001199017	chr15,chr15	-,+	UACA,LRRC49	-40587,87974
chr11:77348199-77348422	chr11	+	77348203	77348468	True	NM_173039,NM_001293	chr11,chr11	+,-	AQP11,CLNS1A	-47574,433
chr10:98601650-98602006	chr10	+	98601668	98601876	True	NM_032440,NM_001170766,NM_152309,NM_001170765	chr10,chr10,chr10,chr10	+,+,-,+	LCOR,LCOR,PIK3AP1,LCOR	-9018,-9713,-121389,-9713
chr2:202098538-202099263	chr2	+	202098587	202099155	True	NM_001080124,NM_033355,NM_001127391,NM_001228,NM_033358	chr2,chr2,chr2,chr2,chr2	+,+,-,+,+	CASP8,CASP8,ALS2CR12,CASP8,CASP8	-472,-472,122996,-472,-472
chr3:58314608-58315954	chr3	+	58314864	58315788	True	NM_017771,NR_033384	chr3,chr3	+,-	PXK,PDHB	2828,103836
chr3:10858357-10859324	chr3	+	10858598	10859232	True	NR_027102,NM_014229	chr3,chr3	-,+	LOC285370,SLC6A11	-52721,-732
chr1:173959157-173959510	chr1	+	173959157	173959554	True	NM_172071,NM_001122770	chr1,chr1	-,+	RC3H1,ZBTB37	2707,-121717
chr12:77273703-77274527	chr12	+	77273759	77274513	True	NM_001321,NM_015336	chr12,chr12	-,+	CSRP2,ZDHHC17	-960,-115956
chr19:14017512-14018256	chr19	+	14017560	14017886	True	NM_017721,NM_024323	chr19,chr19	+,-	CC2D1A,C19orf57	-655,-651
chr6:70991281-70992048	chr6	+	70991314	70991894	True	NM_078485,NM_001105531	chr6,chr6	-,+	COL9A1,FAM135A	1067,131212
chr11:77900658-77900915	chr11	+	77900658	77900964	True	NM_001029859,NM_020798	chr11,chr11	-,+	KCTD21,USP35	-994,-851
chr20:32255934-32256541	chr20	+	32255959	32256507	True	NM_080825,NM_031231,NM_031232,NM_001024675	chr20,chr20,chr20,chr20	+,-,-,+	C20orf144,NECAB3,NECAB3,C20orf134	-5918,5807,5807,-1706
chr1:61548145-61548454	chr1	+	61548158	61548330	True	NM_001145511,NM_001145512,NM_032027,NM_005595,NM_001134673	chr1,chr1,chr1,chr1,chr1	+,+,-,+,+	NFIA,NFIA,TM2D1,NFIA,NFIA	-5263,-675,642815,-229,-229
chr18:28920425-28922055	chr18	+	28920652	28921469	True	NM_001942,NM_024421	chr18,chr18	+,-	DSG1,DSC1	-22661,-177833
chr17:44670335-44670752	chr17_ctg5_hap1	-	378068	378240	False	NM_001113738,NR_033799,NM_006178	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	+,-,-	ARL17A,NSFP1,NSF	13342,2363,2425
chr17:44670335-44670752	chr17_ctg5_hap1	+	1527225	1527397	False	NM_016632	chr17_ctg5_hap1	-	ARL17A	-13341
chr17:44670335-44670752	chr17	+	44670412	44670584	True	NM_001113738,NR_033799,NM_006178	chr17,chr17,chr17	-,+,+	ARL17A,NSFP1,NSF	-13324,-2363,-2425
chr17:44670335-44670752	chr17	+	44452491	44452663	False	NM_001113738,NR_033799	chr17,chr17	-,+	ARL17A,NSFP1	-13328,-2363
chr17:40427835-40428073	chr17	+	40427835	40428013	True	NM_012448,NM_003152	chr17,chr17	-,+	STAT5B,STAT5A	461,11551
chr6:167430642-167432354	chr6	+	167430885	167432344	True	NR_037504,NM_194429	chr6,chr6	-,+	MIR3939,FGFR1OP	-19485,-18123
chr17:3096964-3098079	chr17	+	3097340	3097901	True	NM_012352,NM_003555	chr17,chr17	+,-	OR1A2,OR1G1	2911,-66495
chr5:139926787-139927005	chr5	+	139926788	139926995	True	NM_001035235,NM_003732	chr5,chr5	-,+	SRA1,EIF4EBP3	10734,255
chr6:35463002-35463623	chr6	+	35463007	35463657	True	NM_007104,NM_003214	chr6,chr6	+,-	RPL10A,TEAD3	-26880,1254
chr16:4987611-4988016	chr16	+	4987792	4987942	True	NM_014692,NM_002705	chr16,chr16	+,-	SEC14L5,PPL	20375,-656
chr17:18216346-18218059	chr17	+	18216494	18217937	True	NM_004618,NM_144775	chr17,chr17	-,+	TOP3A,SMCR8	434,656
chr8:145693743-145694207	chr8	+	145693748	145694206	True	NM_032687,NM_138496,NM_145754,NM_003923,NM_001129888	chr8,chr8,chr8,chr8,chr8	-,-,+,-,-	CYHR1,CYHR1,KIFC2,FOXH1,CYHR1	-2899,-3330,-2061,7562,-2717
chr5:112255411-112255777	chr5	+	112255542	112255775	True	NM_005669,NM_152624	chr5,chr5	-,+	REEP5,DCP2	2307,56657
chr20:29520598-29520934	chr20	+	29520620	29520852	True	NM_001037731,NR_003579	chr20,chr20	-,+	DEFB116,FRG1B	375586,91026
chrX:85281213-85282514	chrX	+	85281454	85282530	True	NM_001139514,NM_000390	chrX,chrX	+,-	DACH2,CHM	120924,20087
chrX:100914639-100916515	chrX	+	100914774	100916548	True	NM_014782,NM_177949,NM_177948	chrX,chrX,chrX	-,-,+	ARMCX2,ARMCX2,ARMCX3	89,89,-36474
chr13:46747932-46748698	chr13	+	46747943	46748673	True	NM_002298,NM_001164211	chr13,chr13	-,+	LCP1,LRCH1	7836,378622
chr10:27527980-27528766	chr10	+	27528169	27528653	True	NM_032844,NR_024150,NM_145698,NM_001042473	chr10,chr10,chr10,chr10	+,-,-,-	MASTL,ACBD5,ACBD5,ACBD5	-84478,2465,1205,2465
chr9:80263050-80263451	chr9	+	80263191	80263275	True	NM_004297,NM_033305	chr9,chr9	-,+	GNA14,VPS13A	7,-470881
chr7:20867004-20867334	chr7	+	20867165	20867383	True	NM_198956,NR_026673	chr7,chr7	-,+	SP8,RPL23P8	-40657,-306
chr19:49621580-49621874	chr19	+	49621602	49621902	True	NM_018111,NM_003660,NM_022165	chr19,chr19,chr19	-,+,+	C19orf73,PPFIA3,LIN7B	545,760,-4035
chr22:20068242-20068639	chr22	+	20068288	20068554	True	NR_037412,NM_001190326,NM_022727,NM_022720,NR_031706	chr22,chr22,chr22,chr22,chr22	+,+,-,+,+	MIR3618,DGCR8,TRMT2A,DGCR8,MIR1306	4714,-584,36264,-584,5026
chr11:68082352-68082773	chr11	+	68082406	68082818	True	NM_022338,NM_002335	chr11,chr11	-,+	C11orf24,LRP5	-42937,-2349
chr8:15408271-15409223	chr8	+	15408564	15409267	True	NM_139167,NM_178234	chr8,chr8	-,+	SGCZ,TUSC3	-312772,-11020
chr2:113762278-113762781	chr2	+	113762442	113762810	True	NM_014440,NM_014438	chr2,chr2	+,-	IL1F6,IL1F8	638,47680
chr4:120133872-120134091	chr4	+	120133977	120134073	True	NM_001001701,NM_019050	chr4,chr4	-,+	C4orf3,USP53	87945,-246
chr2:193060127-193060346	chr2	+	193060183	193060289	True	NM_001031716,NM_016192	chr2,chr2	+,-	OBFC2A,TMEFF2	-517373,-539
chr5:36608767-36610264	chr5	+	36608770	36610270	True	NM_001166695,NM_001166696,NM_004172,NM_145000	chr5,chr5,chr5,chr5	+,+,+,-	SLC1A3,SLC1A3,SLC1A3,RANBP3L	-398,-2372,-2372,-306759
chr5:150019874-150020115	chr5	+	150019884	150020070	True	NM_018047,NM_007286,NM_001109974	chr5,chr5,chr5	-,+,+	RBM22,SYNPO,SYNPO	60649,136,136
chr13:114056165-114056492	chr13	+	114056245	114056493	True	NM_024719,NM_017905	chr13,chr13	-,+	GRTP1,TMCO3	-37782,88814
chr20:3187606-3188262	chr20	+	3187682	3188068	True	NM_033453,NM_181493,NM_023935	chr20,chr20,chr20	+,+,-	ITPA,ITPA,DDRGK1	1987,1987,-2387
chr1:46662468-46663494	chr1	+	46662674	46663418	True	NM_001013615,NM_017739	chr1,chr1	+,-	C1orf190,POMGNT1	5587,753
chr7:97911860-97912177	chr7	+	97911859	97912177	True	NM_001159491,NM_015395,NM_015379	chr7,chr7,chr7	+,-,+	BRI3,TECPR1,BRI3	-931,-30391,-931
chr20:1207644-1208844	chr20	+	1207949	1208878	True	NM_018354,NM_001136566	chr20,chr20	-,+	C20orf46,RAD21L1	-42832,-1237
chr3:52862046-52862334	chr3	+	52862169	52862357	True	NM_002218,NM_001166449,NM_205853,NM_002217	chr3,chr3,chr3,chr3	-,-,-,+	ITIH4,ITIH4,MUSTN1,ITIH3	2410,2410,6928,-33436
chr2:86852344-86853515	chr2	+	86852577	86853550	True	NM_022780,NM_001198952,NM_001198951,NM_005667	chr2,chr2,chr2,chr2	+,-,-,-	RMND5A,RNF103,RNF103,RNF103	93863,-1577,-1577,-1577
chr9:16870177-16870479	chr9	+	16870177	16870241	True	NM_017637,NM_001114395	chr9,chr9	-,+	BNC2,CNTLN	595,264796
chr5:149491496-149492176	chr5	+	149491517	149492206	True	NM_005211,NM_001804	chr5,chr5	-,+	CSF1R,CDX1	779,54137
chr11:124485270-124485762	chr11	+	124485275	124485493	True	NM_032811,NR_016021,NM_052959,NM_170601	chr11,chr11,chr11,chr11	+,+,+,-	TBRG1,TBRG1,PANX3,SIAE	7248,7248,-3876,58334
chr1:151130721-151130923	chr1	+	151130811	151130923	True	NM_024575,NM_001204848,NR_037937,NM_001204856,NM_001136543,NM_024041,NM_212551	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,-,+,-	TNFAIP8L2,TNFAIP8L2-SCNM1,SCNM1,SCNM1,LYSMD1,SCNM1,LYSMD1	-1757,-1757,7574,7574,7551,7574,7497
chr5:118691035-118691493	chr5	+	118691123	118691445	True	NM_173666,NM_014350	chr5,chr5	-,+	DTWD2,TNFAIP8	-366883,150
chr12:49740171-49740420	chr12	+	49740203	49740263	True	NM_001008223,NM_024902	chr12,chr12	-,+	C1QL4,DNAJC22	-9232,777
chr22:36598694-36599677	chr22	+	36598953	36599685	True	NM_030643,NM_001136540,NM_145660	chr22,chr22,chr22	-,+,-	APOL4,APOL1,APOL4	1244,49431,1244
chr11:208956-209311	chr11	+	209184	209326	True	NM_016526,NM_001098787,NM_021932	chr11,chr11,chr11	-,-,+	BET1L,BET1L,RIC8A	-1762,-1762,-705
chr10:91461294-91462947	chr10	+	91461371	91462975	True	NR_026835,NM_016195	chr10,chr10	-,+	FLJ37201,KIF20B	-3686,-55
chr19:45418301-45418726	chr19	+	45418310	45418478	True	NM_145288,NM_001645,NM_000041	chr19,chr19,chr19	-,+,+	ZNF296,APOC1,APOE	161260,-440,-9322
chr20:4795268-4795615	chr20	+	4795333	4795655	True	NM_012409,NM_170774,NM_014737	chr20,chr20,chr20	+,-,-	PRND,RASSF2,RASSF2	-92828,164,8686
chr7:56557881-56559084	chr7	+	56557929	56559101	True	NR_029420,NR_026929	chr7,chr7	-,+	LOC650226,DKFZp434L192	-41861,4814
chr1:12703634-12705473	chr1	+	12703902	12705433	True	NM_001013630,NM_004753	chr1,chr1	+,-	AADACL4,DHRS3	-183,-26082
chr20:58528668-58530248	chr20	+	58528784	58530114	True	NM_177980,NM_006242	chr20,chr20	+,-	CDH26,PPP1R3D	3356,-13432
chr10:82116788-82117190	chr10	+	82116853	82117237	True	NM_138812,NM_032372	chr10,chr10	-,+	DYDC1,DYDC2	-353,-346
chr14:36273697-36274570	chr14	+	36273815	36274217	True	NM_014990,NM_194301,NM_032352	chr14,chr14,chr14	-,-,+	RALGAPA1,RALGAPA1,BRMS1L	4271,4271,21379
chr2:45879669-45879895	chr2	+	45879749	45879927	True	NM_018079,NM_005400	chr2,chr2	-,+	SRBD1,PRKCE	-41316,-757
chr3:195346781-195347310	chr3	+	195346963	195347267	True	NM_001647,NR_003265	chr3,chr3	-,+	APOD,SDHAP2	-35887,37642
chr2:135769029-135770609	chr2	+	135769662	135770324	True	NM_001018046,NM_001172435	chr2,chr2	-,+	YSK4,RAB3GAP1	11995,39510
chrX:16888790-16889032	chrX	+	16888911	16888987	True	NM_001198719,NM_002893,NM_001080975	chrX,chrX,chrX	-,-,+	RBBP7,RBBP7,REPS2	-933,-377,75826
chr16:4604744-4605465	chr16	+	4604922	4604990	True	NM_001145011,NM_013399	chr16,chr16	+,-	LOC342346,C16orf5	1500,-16106
chr14:37050980-37051265	chr14	+	37050986	37051284	True	NM_006194,NM_014360	chr14,chr14	+,-	PAX9,NKX2-8	75488,552
chr7:143073255-143074208	chr7	+	143073263	143074055	True	NM_001010972,NM_001031690,NM_003461	chr7,chr7,chr7	+,-,+	ZYX,FAM131B,ZYX	4304,-13423,4304
chr6:27799205-27799424	chr6	+	27799214	27799412	True	NM_021968,NM_003510,NM_003520,NM_003541	chr6,chr6,chr6,chr6	+,-,+,-	HIST1H4J,HIST1H2AK,HIST1H2BN,HIST1H4K	-7362,6755,7027,7
chr6:27799205-27799424	chr6	-	27791795	27791993	False	NM_021968,NM_021066,NM_003521,NM_003541	chr6,chr6,chr6,chr6	+,-,+,-	HIST1H4J,HIST1H2AJ,HIST1H2BM,HIST1H4K	45,-9277,-9024,7362
chr15:102501453-102501678	chr15	+	102501583	102501691	True	NR_026819,NR_034090	chr15,chr15	+,-	FAM138E,DDX11L9	-6546,17655
chr6:74362461-74363094	chr6	+	74362550	74363042	True	NM_001159587,NM_012434	chr6,chr6	+,-	CD109,SLC17A5	42465,745
chr15:31939376-31940384	chr15	+	31939486	31940349	True	NM_015995,NM_130901	chr15,chr15	+,-	KLF13,OTUD7A	-320454,7244
chr15:31939376-31940384	chr15	-	31050162	31050212	False	NM_017762,NM_001039841	chr15,chr15	-,+	MTMR10,ARHGAP11B	233645,-131334
chr10:135172220-135172617	chr10	+	135172383	135172527	True	NM_145202,NM_001098483,NM_198472	chr10,chr10,chr10	+,-,-	PRAP1,C10orf125,C10orf125	-11590,-854,-854
chrX:33002665-33003677	chrX	+	33002724	33003726	True	NM_004007,NM_152631	chrX,chrX	-,+	DMD,FAM47B	34645,1957186
chr17:62491985-62492664	chr17	+	62492214	62492640	True	NM_138363,NM_007215,NM_004396	chr17,chr17,chr17	+,-,-	CCDC45,POLG2,DDX5	10517,595,9895
chr4:39981213-39981510	chr4	+	39981235	39981328	True	NM_001100399,NM_001100400,NM_018177	chr4,chr4,chr4	-,-,+	PDS5A,PDS5A,N4BP2	-1659,-1659,77195
chr10:120788047-120788334	chr10	+	120788204	120788338	True	NR_002917,NM_199461	chr10,chr10	-,+	SNORA19,NANOS1	31362,889
chr3:52869264-52869934	chr3	+	52869278	52869774	True	NM_002218,NM_001166449,NM_205853,NM_002217	chr3,chr3,chr3,chr3	-,-,-,+	ITIH4,ITIH4,MUSTN1,ITIH3	-4561,-4561,-43,-40545
chr1:42804068-42804956	chr1	+	42804282	42804999	True	NM_001198852,NM_001198850,NM_001198851,NM_014947,NM_173642	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	FOXJ3,FOXJ3,FOXJ3,FOXJ3,RIMKLA	-3396,-2734,-3646,-3379,41468
chrX:11268759-11270515	chrX	+	11268829	11270394	True	NM_001142,NM_013423	chrX,chrX	+,-	AMELX,ARHGAP6	41138,13764
chr17:60146347-60146906	chr17	+	60146598	60146751	True	NM_001144933,NM_005121	chr17,chr17	+,-	EFCAB3,MED13	300827,-3955
chr3:38498617-38500044	chr3	+	38498801	38500062	True	NM_001106,NR_028389	chr3,chr3	+,-	ACVR2B,LOC100128640	-3062,-2490
chr15:89360463-89362350	chr15	+	89361422	89362362	True	NM_178232,NM_013227	chr15,chr15	-,+	HAPLN3,ACAN	76458,-14800
chr22:24989914-24990178	chr22	+	24989913	24990145	True	NM_005265,NM_207644,NM_001032364	chr22,chr22,chr22	+,-,+	GGT1,C22orf36,GGT1	9034,-878,8978
chr5:140724376-140725350	chr5	+	140724390	140725176	True	NM_032095,NM_018922,NM_005642,NM_032009,NM_032053,NM_032011,NM_018915,NM_018916,NM_018917	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,-,+,+,+,+,+,+	PCDHGB1,PCDHGB1,TAF7,PCDHGA2,PCDHGA4,PCDHGA3,PCDHGA2,PCDHGA3,PCDHGA4	4651,4651,-24039,-6087,9591,-840,-6087,-840,9591
chr7:106507813-106508065	chr7	+	106507826	106508094	True	NM_175884,NM_002649	chr7,chr7	-,+	FLJ36031,PIK3CG	-206192,-1953
chr4:1794082-1794328	chr4	+	1794085	1794343	True	NM_012318,NM_000142,NM_001163213,NM_022965	chr4,chr4,chr4,chr4	-,+,+,+	LETM1,FGFR3,FGFR3,FGFR3	63681,695,695,695
chr11:17298797-17299813	chr11	+	17298806	17299606	True	NM_002645,NM_005013	chr11,chr11	-,+	PIK3C2A,NUCB2	-107452,-579
chr11:68673205-68673521	chr11	+	68673303	68673541	True	NM_181515,NM_181514,NM_002180	chr11,chr11,chr11	-,-,+	MRPL21,MRPL21,IGHMBP2	-2000,-2000,-2036
chr2:145092493-145093816	chr2	+	145093045	145093820	True	NR_033870,NM_001164629	chr2,chr2	+,-	DKFZp686O1327,GTDC1	331713,-2962
chr19:40791191-40791577	chr19	+	40791297	40791575	True	NM_001031696,NR_030371,NM_001626	chr19,chr19,chr19	+,-,-	PLD3,MIR641,AKT2	62756,-2749,-32
chr1:15851272-15851703	chr1	+	15851510	15851747	True	NM_015291,NM_032996,NM_001229	chr1,chr1,chr1	+,-,-	DNAJC16,CASP9,CASP9	1604,-225,-570
chr17:39868855-39869298	chr17	+	39868981	39869113	True	NM_001079870,NM_000805	chr17,chr17	-,+	HAP1,GAST	21835,-419
chr12:6420536-6421466	chr12	+	6420587	6421389	True	NM_001144857,NM_001144856,NM_001065,NM_018173	chr12,chr12,chr12,chr12	+,+,-,+	PLEKHG6,PLEKHG6,TNFRSF1A,PLEKHG6	427,-539,29944,-1036
chr11:32849910-32851091	chr11	+	32850151	32851092	True	NM_001008391,NM_024081	chr11,chr11	-,+	CCDC73,PRRG4	-33964,396
chr1:33724195-33725023	chr1	+	33724263	33724925	True	NR_037400,NM_152493	chr1,chr1	-,+	MIR3605,ZNF362	73218,-2140
chr16:89628228-89628470	chr16	+	89628278	89628504	True	NM_033251,NR_002450,NM_000977,NM_013275	chr16,chr16,chr16,chr16	+,+,+,-	RPL13,SNORD68,RPL13,ANKRD11	-1198,-491,-1239,-71309
chr16:25124384-25125047	chr16	+	25124502	25125046	True	NM_018054,NM_001032391,NM_016309	chr16,chr16,chr16	-,+,+	ARHGAP17,LCMT1,LCMT1	-97827,-1513,-1513
chr17:74865586-74865973	chr17	+	74865701	74865763	True	NM_144677,NM_198955,NM_001199172,NR_036608	chr17,chr17,chr17,chr17	+,+,+,-	MGAT5B,MGAT5B,MGAT5B,SRSF2	-954,2965,-954,-132208
chr5:134369901-134370179	chr5	+	134369900	134370228	True	NM_002653,NM_178019	chr5,chr5	-,+	PITX1,CATSPER3	52,-66355
chr4:110478214-110478583	chr4	+	110478343	110478431	True	NM_017918,NM_001226	chr4,chr4	+,-	CCDC109B,CASP6	2923,146248
chr2:42721554-42721754	chr2	+	42721587	42721657	True	NM_020744,NM_172344,NM_133329	chr2,chr2,chr2	+,-,-	MTA3,KCNG3,KCNG3	74013,-350,-350
chr4:618775-619312	chr4	+	618780	619262	True	NM_000283,NM_007100,NM_001145291	chr4,chr4,chr4	+,-,+	PDE6B,ATP5I,PDE6B	100,48915,100
chr12:30832066-30832883	chr12	+	30832099	30832921	True	NM_001190995,NM_001080509	chr12,chr12	-,+	IPO8,TSPAN11	-1921,246916
chr2:46526854-46527102	chr2	+	46526853	46527049	True	NM_001430,NM_080653	chr2,chr2	+,-	EPAS1,ATP6V1E2	-2363,220097
chr5:66140445-66141118	chr5	+	66140471	66140816	True	NM_005582,NM_015183	chr5,chr5	-,+	CD180,MAST4	351864,-15918
chr1:247242278-247242830	chr1	+	247242283	247242789	True	NM_173858,NR_037894,NM_001204220,NM_033213	chr1,chr1,chr1,chr1	+,-,-,-	VN1R5,ZNF670-ZNF695,ZNF670,ZNF670	176584,-168,-168,-168
chr3:33879373-33880635	chr3	+	33879395	33879779	True	NM_015097,NR_027867	chr3,chr3	-,+	CLASP2,PDCD6IP	-119547,-9318
chr4:76862423-76862738	chr4	+	76862431	76862498	True	NM_014435,NM_001042402,NM_001130017	chr4,chr4,chr4	-,-,+	NAAA,NAAA,ART3	-265,-265,69838
chr17:39093118-39093710	chr17	+	39093138	39093626	True	NM_015515,NM_001195386	chr17,chr17	-,+	KRT23,TMEM99	260,-117752
chr5:134211450-134212052	chr5	+	134211711	134212101	True	NM_002653,NM_024715	chr5,chr5	-,+	PITX1,TXNDC15	157913,-2309
chr19:39575882-39576302	chr19	+	39575918	39576340	True	NM_178820,NM_001004318	chr19,chr19	-,+	FBXO27,PAPL	-52720,-1024
chr17:48048979-48049400	chr17	+	48049127	48049423	True	NM_001934,NM_005220,NM_138281	chr17,chr17,chr17	+,-,+	DLX4,DLX3,DLX4	706,23215,-2616
chrX:70584571-70584981	chrX	+	70584727	70584891	True	NM_001171162,NM_138923,NM_004606	chrX,chrX,chrX	-,+,+	ZMYM3,TAF1,TAF1	-109680,1222,1222
chr21:43134054-43134263	chr21	+	43134171	43134241	True	NR_027272,NR_024028	chr21,chr21	-,+	C21orf129,NCRNA00112	1744,2354
chr8:21945683-21946405	chr8	+	21946041	21946247	True	NM_024815,NM_022749	chr8,chr8	-,+	NUDT18,FAM160B2	20735,466
chr11:32114156-32115437	chr11	+	32114405	32115310	True	NM_001127612,NM_002901	chr11,chr11	-,+	PAX6,RCN1	-274896,-1992
chr15:75072960-75073316	chr15	+	75073010	75073302	True	NM_000499,NM_001127190,NM_004383	chr15,chr15,chr15	-,+,+	CYP1A1,CSK,CSK	-55133,1122,1122
chr1:16134311-16135026	chr1	+	16134311	16134993	True	NM_001089591,NM_015001	chr1,chr1	-,+	UQCRHL,SPEN	-117,39365
chr12:21163830-21164533	chr12	+	21163979	21164529	True	NM_001009562,NM_021094	chr12,chr12	+,-	LST-3TM12,SLCO1A2	4100,323359
chr22:50450785-50451003	chr22	+	50450800	50451006	True	NM_001001694,NM_001164104	chr22,chr22	-,+	IL17REL,MOV10L1	99,77428
chr5:112627851-112628790	chr5	+	112628011	112628779	True	NM_002387,NM_022828	chr5,chr5	-,+	MCC,YTHDC2	1885,220611
chr9:139692745-139693850	chr9	+	139693039	139693895	True	NR_024580,NM_001039374,NM_001173989,NM_001173988,NM_024718,NM_032928	chr9,chr9,chr9,chr9,chr9,chr9	-,+,+,+,+,+	LOC100131193,KIAA1984,C9orf86,C9orf86,C9orf86,TMEM141	9455,-2300,8478,8478,8478,-7313
chr12:57036564-57038249	chr12	+	57036595	57038099	True	NR_003046,NM_003725,NM_001686,NM_013449,NR_002737	chr12,chr12,chr12,chr12,chr12	-,+,-,-,-	SNORD59B,HSD17B6,ATP5B,BAZ2A,SNORD59A	-83,119008,1805,-6432,838
chr16:1495768-1496016	chr16	+	1495790	1495990	True	NM_001143980,NM_016111	chr16,chr16	-,+	CCDC154,TELO2	-1300,47361
chr13:111524778-111525228	chr13	+	111524792	111525240	True	NM_005537,NR_027701	chr13,chr13	+,-	ING1,C13orf29	-157484,-2137
chr17:47433182-47433509	chr17	+	47433336	47433518	True	NM_014897,NR_034161,NM_001145365	chr17,chr17,chr17	-,+,-	ZNF652,FLJ40194,ZNF652	6371,-107784,6012
chr5:110401222-110402833	chr5	+	110401460	110402690	True	NM_001039763,NM_033035,NR_033425	chr5,chr5,chr5	-,+,+	TMEM232,TSLP,TSLP	-339010,4699,6321
chr17:10603142-10604806	chr17	+	10603170	10604408	True	NM_004589,NM_020233	chr17,chr17	-,+	SCO1,C17orf48	-2285,-2310
chr5:133565341-133565619	chr5	+	133565504	133565626	True	NR_037434,NM_002715	chr5,chr5	+,-	MIR3661,PPP2CA	-4115,-3554
chr18:14474467-14474946	chr18	+	14474495	14474993	True	NR_024076,NR_026756	chr18,chr18	-,+	CXADRP3,LOC284233	23762,-137124
chr16:3562973-3563259	chr16	+	3562985	3563297	True	NM_024793,NM_001080524	chr16,chr16	+,-	CLUAP1,C16orf90	-3142,-17564
chr4:99920251-99920752	chr4	+	99920269	99920570	True	NR_037455,NM_015143,NM_001968	chr4,chr4,chr4	+,+,-	MIR3684,METAP1,EIF4E	-1789,-3539,-68483
chr17:39990502-39991985	chr17	+	39991113	39991840	True	NM_052935,NR_033464,NR_033465,NM_152467	chr17,chr17,chr17,chr17	-,-,-,+	NT5C3L,NT5C3L,NT5C3L,KLHL10	733,698,733,2202
chr1:247171339-247171742	chr1	+	247171469	247171767	True	NR_015422,NM_001204221,NR_037892,NM_020394	chr1,chr1,chr1,chr1	+,-,-,-	LOC149134,ZNF695,ZNF695,ZNF695	-218601,-74,-74,-74
chr9:4985627-4987590	chr9	+	4985752	4987464	True	NM_007179,NM_004972	chr9,chr9	-,+	INSL6,JAK2	198205,-558
chr16:14928126-14928424	chr16	+	14928144	14928420	True	NR_023387,NM_014287	chr16,chr16	-,+	ABCC6P2,NOMO1	-9585,-552
chr16:14928126-14928424	chr16	+	16326959	16327009	False	NM_001171,NM_001079528,NM_001004067	chr16,chr16,chr16	-,-,+	ABCC6,ABCC6,NOMO3	-9631,-9631,-621
chr16:14928126-14928424	chr16	-	18572650	18572926	False	NM_001004060,NM_173614,NR_003569	chr16,chr16,chr16	-,-,+	NOMO2,NOMO2,ABCC6P1	558,558,9643
chr10:128081621-128083068	chr10	+	128081721	128083088	True	NM_021641,NM_145235,NM_003474	chr10,chr10,chr10	-,+,-	ADAM12,FANK1,ADAM12	-4594,-496669,-4594
chr9:125669498-125669892	chr9	+	125669622	125669810	True	NM_012197,NM_018835,NM_001100588,NM_006626	chr9,chr9,chr9,chr9	+,-,-,-	RABGAP1,RC3H2,RC3H2,ZBTB6	33477,-2060,-2060,5849
chr5:160976110-160976973	chr5	+	160976183	160977010	True	NM_000811,NM_021911,NM_000813	chr5,chr5,chr5	+,-,-	GABRA6,GABRB2,GABRB2	135647,-1053,-1053
chr20:39892332-39893053	chr20	+	39892394	39892777	True	NM_015035,NM_022896	chr20,chr20	-,+	ZHX3,LPIN3	36015,76782
chr10:120087328-120089232	chr10	+	120087598	120089051	True	NM_001134672,NR_026940	chr10,chr10	-,+	C10orf84,CASC2	12839,-281330
chr19:38922058-38923247	chr19	+	38922074	38922730	True	NM_170604,NM_001146204,NM_001146205,NM_001146206,NM_001146207,NM_001146202,NM_001146203,NM_000540,NM_001042723	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,+,+	RASGRP4,RASGRP4,RASGRP4,RASGRP4,RASGRP4,RASGRP4,RASGRP4,RYR1,RYR1	-5129,-5129,-5129,-5129,-5129,-5129,-5129,1609,1609
chr8:38244630-38245689	chr8	+	38244639	38245567	True	NM_017778,NM_001199660,NM_023034,NM_001199659,NM_144652	chr8,chr8,chr8,chr8,chr8	-,+,-,+,+	WHSC1L1,LETM2,WHSC1L1,LETM2,LETM2	-4849,-41,-4849,-731,-731
chr5:157064063-157065258	chr5	+	157064164	157065275	True	NM_001145132,NM_007017	chr5,chr5	+,-	C5orf52,SOX30	33285,14203
chr10:97414012-97415936	chr10	+	97414271	97415715	True	NM_001098175,NM_001017423,NM_002860	chr10,chr10,chr10	+,-,-	ENTPD1,ALDH18A1,ALDH18A1	55820,903,903
chr3:113757842-113758140	chr3	+	113757994	113758063	True	NM_020817,NM_024638	chr3,chr3	-,+	KIAA1407,QTRTD1	17454,17547
chr1:12848650-12850595	chr1	+	12848750	12850300	True	NM_023013,NM_001146344	chr1,chr1	+,-	PRAMEF1,PRAMEF11	1245,41014
chr15:45808990-45810068	chr15	+	45809120	45809847	True	NR_022014,NM_013309	chr15,chr15	+,-	HMGN2P46,SLC30A4	-5852,5214
chr13:100626744-100627417	chr13	+	100626820	100627309	True	NM_033132,NM_007129	chr13,chr13	-,+	ZIC5,ZIC2	-2642,6716
chr16:1585562-1585868	chr16	+	1585684	1585906	True	NM_001013658,NM_024600	chr16,chr16	-,+	PTX4,TMEM204	-47216,-1504
chr2:152577865-152578938	chr2	+	152577866	152578963	True	NM_001164507,NM_001177665	chr2,chr2	-,+	NEB,RIF1	12092,-311313
chr2:217239163-217239659	chr2	+	217239529	217239659	True	NM_014140,NM_020814	chr2,chr2	+,-	SMARCAL1,MARCH4	37477,-2779
chr1:43205495-43206035	chr1	+	43205504	43205998	True	NM_024097,NM_001123395,NM_148960,NM_001185117	chr1,chr1,chr1,chr1	+,-,-,-	C1orf50,CLDN19,CLDN19,CLDN19	26917,-23,-23,-23
chr1:160853422-160854559	chr1	+	160853624	160854524	True	NM_002348,NM_017625	chr1,chr1	+,-	LY9,ITLN1	-87748,486
chr17:76622577-76622992	chr17	+	76622719	76622949	True	NM_173628,NM_024419	chr17,chr17	-,+	DNAH17,PGS1	-49243,-248038
chr2:85920584-85921704	chr2	+	85920698	85921493	True	NM_198843,NM_012483,NM_006433	chr2,chr2,chr2	-,+,+	SFTPB,GNLY,GNLY	-24834,-24,-24
chrX:134128190-134128614	chrX	+	134128216	134128384	True	NM_001163438,NM_001078173	chrX,chrX	+,-	LOC644538,FAM127C	-3308,28240
chr2:45789664-45791263	chr2	+	45789774	45791278	True	NM_018079,NM_005400	chr2,chr2	-,+	SRBD1,PRKCE	47213,87764
chrY:1281307-1282692	chrY	+	1281379	1281775	True	NM_022148,NM_001161531,NM_001012288	chrY,chrY,chrY	-,+,-	CRLF2,CSF2RA,CRLF2	-15,55917,-18
chrY:1281307-1282692	chrX	+	1331379	1331775	False	NM_022148,NM_001161531,NM_001012288	chrX,chrX,chrX	-,+,-	CRLF2,CSF2RA,CRLF2	-15,55917,-18
chr22:24181785-24182837	chr22	+	24182059	24182539	True	NM_198440,NM_001002862,NM_001024938,NM_001135751	chr22,chr22,chr22,chr22	-,-,+,-	DERL3,DERL3,SLC2A11,DERL3	-860,-860,16519,-860
chr2:217476677-217476911	chr2	+	217476697	217476832	True	NM_000597,NM_000599	chr2,chr2	+,-	IGFBP2,IGFBP5	21294,83491
chr5:176935840-176936261	chr5	+	176935939	176936195	True	NM_001144875,NM_001174102,NM_024872,NM_001144876,NM_016222	chr5,chr5,chr5,chr5,chr5	-,+,-,-,-	DOK3,PRR7,DOK3,DOK3,DDX41	1282,-60664,713,1282,7822
chr16:58163344-58163598	chr16	+	58163356	58163560	True	NM_013242,NM_002428	chr16,chr16	-,+	C16orf80,MMP15	-60,-104125
chr17:27920266-27920480	chr17	+	27920290	27920402	True	NM_014030,NM_001085454,NM_152345	chr17,chr17,chr17	-,-,+	GIT1,GIT1,ANKRD13B	-3680,-3680,124
chr7:129932363-129933012	chr7	+	129932481	129933013	True	NM_032842,NM_001163446,NM_016352	chr7,chr7,chr7	-,+,+	TMEM209,CPA4,CPA4	-87143,28,28
chr12:27172889-27173498	chr12	+	27172979	27173489	True	NM_004264,NM_016551	chr12,chr12	+,-	MED21,TM7SF3	1993,-5640
chr1:172413316-172414441	chr1	+	172413467	172414343	True	NM_153747,NM_002642,NM_139240	chr1,chr1,chr1	-,-,+	PIGC,PIGC,C1orf105	-237,-237,-23690
chr1:93292111-93293800	chr1	+	93292433	93293623	True	NR_000006,NM_000969,NM_005665	chr1,chr1,chr1	+,+,-	SNORD21,RPL5,EVI5	9222,3970,-34472
chr2:220459346-220461064	chr2	+	220460165	220460974	True	NM_001173408,NM_052902	chr2,chr2	-,+	OBSL1,STK11IP	-23897,1621
chr3:44314211-44316137	chr3	+	44314503	44316056	True	NM_181489,NM_001145030	chr3,chr3	-,+	ZNF445,C3orf77	203164,-31176
chr3:189838856-189839113	chr3	+	189838865	189839103	True	NM_001134418,NM_006580,NM_018192	chr3,chr3,chr3	-,+,-	LEPREL1,CLDN16,LEPREL1	1173,266557,-35
chr1:182922563-182923504	chr1	+	182922681	182923254	True	NM_030933,NM_002293	chr1,chr1	-,+	SHCBP1L,LAMC1	-128,69340
chr5:1010756-1010958	chr5	+	1010848	1010916	True	NM_033120,NM_006598	chr5,chr5	+,-	NKD2,SLC12A7	-1731,101306
chrX:64196427-64196964	chrX	+	64196461	64196988	True	NM_018684,NM_001178033,NM_001010888	chrX,chrX,chrX	-,-,+	ZC4H2,ZC4H2,ZC3H12B	-48,-48,511626
chr20:3025255-3026027	chr20	+	3025447	3026063	True	NM_001501,NM_178331,NM_000490,NM_178332,NM_030811	chr20,chr20,chr20,chr20,chr20	+,+,-,+,+	GNRH2,GNRH2,AVP,GNRH2,MRPS26	-1230,-1230,39357,-1230,611
chr8:28247564-28248440	chr8	+	28247652	28248107	True	NM_018660,NM_006228	chr8,chr8	-,+	ZNF395,PNOC	-3675,-73063
chr4:3765122-3766256	chr4	+	3765268	3766208	True	NM_000683,NR_034136	chr4,chr4	+,-	ADRA2C,LOC100133461	2087,-85686
chr2:120191438-120192025	chr2	+	120191489	120191993	True	NM_001017927,NM_183240	chr2,chr2	-,+	C2orf76,TMEM37	-67231,-2094
chr2:219536414-219536700	chr2	+	219536430	219536740	True	NM_022453,NM_015690	chr2,chr2	-,+	RNF25,STK36	91,21
chr11:62570710-62571388	chr11	+	62570819	62571385	True	NM_199337,NM_006362,NM_001081491	chr11,chr11,chr11	+,-,-	TMEM179B,NXF1,NXF1	-15996,1629,1629
chr14:55738915-55739523	chr14	+	55738946	55739463	True	NM_152231,NM_014750,NM_017943	chr14,chr14,chr14	+,-,+	FBXO34,DLGAP5,FBXO34	-126,-80550,-977
chr2:38592108-38592516	chr2	+	38592225	38592495	True	NM_001135673,NR_027252	chr2,chr2	-,+	ATL2,C2orf58	11987,-234037
chr19:57922894-57924105	chr19	+	57923074	57923723	True	NM_020633,NM_006959	chr19,chr19	-,+	VN1R1,ZNF17	44434,-596
chr3:186543808-186544608	chr3	+	186543946	186544591	True	NM_181573,NM_001177800	chr3,chr3	-,+	RFC4,ADIPOQ	-19462,15871
chr5:171613482-171613808	chr5	+	171613792	171613854	True	NM_005990,NM_001171183	chr5,chr5	-,+	STK10,EFCAB9	1542,7321
chr14:91582104-91583009	chr14	+	91582164	91582893	True	NM_001102369,NM_001102368,NM_001102367,NM_001102366,NM_024952,NR_003709,NM_182398	chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,+,+,+,-	C14orf159,C14orf159,C14orf159,C14orf159,C14orf159,SNORA11B,RPS6KA5	-1858,-1858,-1236,-1858,-1858,9876,-55171
chr19:46854053-46854809	chr19	+	46854186	46854808	True	NM_006247,NM_001204284,NM_032040	chr19,chr19,chr19	+,+,-	PPP5C,PPP5C,CCDC8	-3986,-3986,62161
chr1:157803126-157804383	chr1	+	157803257	157804361	True	NM_005894,NM_018240	chr1,chr1	-,+	CD5L,KIRREL	7323,158701
chrX:53310742-53311099	chrX	+	53310815	53311079	True	NR_024449,NM_015075,NM_144968	chrX,chrX,chrX	-,-,+	IQSEC2,IQSEC2,RIBC1	-19,-19,138759
chr17:34839357-34839564	chr17	+	34839406	34839490	True	NM_004773,NM_001040282	chr17,chr17	+,-	ZNHIT3,TBC1D3G	2982,-31303
chr16:2689273-2689645	chr16	+	2689411	2689595	True	NR_024492,NM_031948	chr16,chr16	+,-	FLJ42627,PRSS27	-479,81007
chr16:2689273-2689645	chr16	-	2610598	2610782	False	NR_036139,NM_031268	chr16,chr16	-,+	MIR3178,PDPK1	-28592,-22679
chr2:70475844-70476130	chr2	+	70475849	70476143	True	NM_016297,NM_022173,NM_022037	chr2,chr2,chr2	+,-,-	PCYOX1,TIA1,TIA1	9087,-70,-70
chr4:48892109-48893709	chr4	+	48892457	48893741	True	NM_001014446,NM_001168254	chr4,chr4	-,+	OCIAD2,OCIAD1	15124,-59200
chr7:11859323-11859742	chr7	+	11859357	11859737	True	NM_015204,NM_001134232	chr7,chr7	-,+	THSD7A,TMEM106B	12137,391110
chr5:180169496-180170259	chr5	+	180169534	180170284	True	NM_001001657,NR_027183	chr5,chr5	-,+	OR2Y1,LOC729678	-2476,86674
chrX:77583120-77585001	chrX	+	77583259	77584882	True	NM_006639,NM_000291	chrX,chrX	-,+	CYSLTR1,PGK1	-172,-223644
chr14:24839316-24839521	chr14	+	24839316	24839432	True	NM_001198966,NM_001198967,NM_001198965,NM_006871,NM_004554,NM_001136022	chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,-,+,+	NFATC4,NFATC4,NFATC4,RIPK3,NFATC4,NFATC4	-1065,-3222,-2141,-30074,-2141,-3222
chr15:84836881-84837451	chr15	+	84837275	84837325	True	NR_027001,NR_033738	chr15,chr15	-,+	LOC388152,LOC440300	61645,23274
chr15:84836881-84837451	chr15	-	85048222	85048272	False	NR_003246,NR_033787	chr15,chr15	-,+	GOLGA6L5,DNM1P41	11856,-2467
chr19:11468270-11468576	chr19	+	11468342	11468576	True	NM_001170635,NM_022737,NM_198536	chr19,chr19,chr19	+,+,-	LPPR2,LPPR2,TMEM205	-2331,-2331,-11361
chrX:67658050-67658418	chrX	+	67658142	67658458	True	NM_002547,NM_001195214	chrX,chrX	-,+	OPHN1,YIPF6	-4843,60165
chr5:16505833-16506673	chr5	+	16506071	16506555	True	NM_019000,NM_006317	chr5,chr5	-,+	FAM134B,BASP1	2528,711194
chr16:58500946-58501554	chr16	+	58501003	58501595	True	NM_001130487,NR_002978,NM_020465,NM_022910	chr16,chr16,chr16,chr16	+,-,+,+	NDRG4,SNORA46,NDRG4,NDRG4	-3060,80992,-3505,-2289
chr12:124068854-124069153	chr12	+	124068858	124069011	True	NM_001414,NM_006815	chr12,chr12	-,+	EIF2B1,TMED2	49362,64
chr12:112209825-112210209	chr12	+	112210049	112210171	True	NR_015404,NM_001204889,NM_000690	chr12,chr12,chr12	-,+,+	C12orf47,ALDH2,ALDH2	70593,-5410,-5410
chr2:54001094-54002771	chr2	+	54001185	54002612	True	NM_001201965,NM_001008708	chr2,chr2	-,+	ASB3,CHAC2	11423,-6314
chrX:41781508-41781936	chrX	+	41781511	41781929	True	NM_003688,NM_001126055,NM_001126054,NM_080817	chrX,chrX,chrX,chrX	-,-,-,+	CASK,CASK,CASK,GPR82	408,408,408,-198154
chr8:105353090-105353616	chr8	+	105353100	105353640	True	NM_001385,NM_030788	chr8,chr8	-,+	DPYS,TM7SF4	125687,-1098
chr18:7573678-7574001	chr18	+	7573927	7573991	True	NM_005559,NM_002845,NM_001105244	chr18,chr18,chr18	-,+,+	LAMA1,PTPRM,PTPRM	-456114,-6667,-6667
chrX:149106173-149106388	chrX	+	149106195	149106399	True	NR_027456,NM_001013845	chrX,chrX	+,-	LOC100272228,CXorf40B	366,367
chr5:60112061-60112727	chr5	+	60112227	60112496	True	NM_001104558,NM_174889	chr5,chr5	-,+	ELOVL7,NDUFAF2	27662,128459
chr20:45948020-45948674	chr20	+	45948024	45948690	True	NR_024594,NM_012408	chr20,chr20	+,-	LOC100131496,ZMYND8	-829,36834
chr11:71849334-71850186	chr11	+	71849447	71850231	True	NM_014042,NM_000804	chr11,chr11	-,+	C11orf51,FOLR3	-25625,-2734
chr10:119782363-119783455	chr10	+	119782367	119783176	True	NM_014904,NR_026941	chr10,chr10	-,+	RAB11FIP2,CASC2	22988,23155
chr2:133014027-133014270	chr2	+	133014066	133014312	True	NR_031608,NM_001508,NR_027020	chr2,chr2,chr2	-,+,-	MIR663B,GPR39,ANKRD30BL	391,159834,1280
chr3:71774856-71775414	chr3	+	71775129	71775421	True	NM_001134650,NM_001134651,NM_018971	chr3,chr3,chr3	-,-,+	EIF4E3,EIF4E3,GPR27	2898,-603,27779
chr19:9946467-9946771	chr19	+	9946504	9946770	True	NM_001048241,NM_024292,NM_006221,NM_017703	chr19,chr19,chr19,chr19	+,+,+,-	UBL5,UBL5,PIN1,FBXL12	-7987,-7987,-556,-16773
chr10:101772664-101774066	chr10	+	101772987	101773966	True	NM_015221,NR_024130	chr10,chr10	-,+	DNMBP,DNMBP-AS1	-3311,-86072
chr11:62748816-62750052	chr11	+	62748987	62750085	True	NR_037193,NM_153278,NM_153277,NM_153276,NM_004790	chr11,chr11,chr11,chr11,chr11	+,-,-,-,-	SLC3A2,SLC22A6,SLC22A6,SLC22A6,SLC22A6	-99867,2434,2434,2434,2434
chrX:122317757-122318422	chrX	+	122317832	122318390	True	NM_007325,NM_000828,NM_001081550	chrX,chrX,chrX	+,+,-	GRIA3,GRIA3,THOC2	43,43,548564
chr7:100794164-100794646	chr7	+	100794469	100794587	True	NM_003378,NM_001283	chr7,chr7	-,+	VGF,AP1S1	14315,3098
chr9:141042778-141043473	chr18	-	75103	75211	False	NM_005131,NR_033770	chr18,chr18	-,+	THOC1,ROCK1P1	192901,33853
chr9:141042778-141043473	chr9	+	141042832	141042954	True	NM_032937,NR_027156	chr9,chr9	-,+	C9orf37,TUBBP5	-529524,1610
chr2:220192728-220193681	chr2	+	220192850	220193697	True	NM_001007089,NM_006736	chr2,chr2	-,+	RESP18,DNAJB2	4252,-48861
chr7:75158327-75158878	chr7	+	75158328	75158414	True	NM_001099435,NR_028059	chr7,chr7	+,-	SPDYE5,PMS2P3	-34083,-875
chr15:75287933-75288365	chr15	+	75287969	75288395	True	NM_001178111,NM_017793,NM_001178112,NR_033660,NM_138967	chr15,chr15,chr15,chr15,chr15	+,-,+,+,+	SCAMP5,RPP25,SCAMP5,SCAMP5,SCAMP5	-144,-38194,-144,-144,-144
chr17:44929581-44929883	chr17	+	44929624	44929766	True	NM_003396,NM_030753	chr17,chr17	+,-	WNT9B,WNT3	-707,-33542
chr1:166957533-166958404	chr1	+	166957745	166958301	True	NM_199351,NM_032858	chr1,chr1	-,+	ILDR2,MAEL	-13184,217
chr14:23875106-23876210	chr14	+	23875156	23876084	True	NM_138460,NM_002471	chr14,chr14	+,-	CMTM5,MYH6	-29190,1452
chrX:135578663-135578921	chrX	+	135578703	135578957	True	NM_001163280,NM_001727,NM_014500,NM_001173516	chrX,chrX,chrX,chrX	+,+,+,-	HTATSF1,BRS3,HTATSF1,MAP7D3	280,-8630,713,-240062
chr19:36139807-36140675	chr19	+	36139905	36140205	True	NM_000704,NM_001863,NM_014209	chr19,chr19,chr19	-,+,+	ATP4A,COX6B1,ETV2	-85345,-831,-7309
chr11:126033817-126035785	chr11	+	126033821	126035770	True	NM_001144827,NM_024556	chr11,chr11	-,+	RPUSD4,FAM118B	45867,45848
chr6:44265583-44266362	chr6	+	44265586	44266238	True	NM_001137560,NM_182539	chr6,chr6	+,-	TMEM151B,TCTE1	-27157,-128
chr13:24000247-24000634	chr13	+	24000274	24000334	True	NM_001204459,NM_014363	chr13,chr13	+,-	TNFRSF19,SACS	144174,7557
chr22:38901207-38901611	chr22	+	38901218	38901588	True	NM_006855,NM_001098504,NM_006386	chr22,chr22,chr22	+,-,-	KDELR3,DDX17,DDX17	-37186,807,807
chr8:82755399-82755961	chr8	+	82755398	82756009	True	NM_022133,NM_152284,NM_152836,NM_152837	chr8,chr8,chr8,chr8	-,+,-,-	SNX16,CHMP4C,SNX16,SNX16	-877,-110771,-877,-877
chr18:74172424-74172752	chr18	+	74172578	74172790	True	NR_015417,NM_014643	chr18,chr18	+,-	LOC284276,ZNF516	67821,34406
chr15:65572301-65572697	chr15	+	65572436	65572502	True	NM_001101362,NM_017851	chr15,chr15	+,-	KBTBD13,PARP16	-203342,6566
chr10:43133977-43134232	chr10	+	43134010	43134222	True	NM_014753,NM_006955	chr10,chr10	+,-	BMS1,ZNF33B	143731,-18
chr15:83379759-83379961	chr15	+	83379762	83379960	True	NR_034139,NM_004644,NR_003011	chr15,chr15,chr15	-,-,+	LOC338963,AP3B2,SCARNA15	2835,-1127,44736
chr15:91263903-91264716	chr15	+	91264038	91264508	True	NM_198527,NM_000057	chr15,chr15	-,+	HDDC3,BLM	211325,-3510
chr3:37035283-37036730	chr3	+	37035353	37036237	True	NM_001167617,NM_014805,NM_000249,NM_001167618,NM_001167619	chr3,chr3,chr3,chr3,chr3	+,-,+,+,+	MLH1,EPM2AIP1,MLH1,MLH1,MLH1	-137,-558,-564,-137,-137
chr1:198648171-198648452	chr1	+	198648177	198648341	True	NM_080921,NM_133326	chr1,chr1	+,-	PTPRC,ATP6V1G3	-40091,-138102
chr17:40430718-40431453	chr17	+	40431228	40431454	True	NM_012448,NM_003152	chr17,chr17	-,+	STAT5B,STAT5A	-2804,8110
chr10:30990843-30992572	chr10	+	30991002	30991812	True	NM_183058,NM_005204	chr10,chr10	-,+	LYZL2,MAP3K8	-72355,-268188
chr15:75251748-75253050	chr15	+	75252167	75253039	True	NM_017793,NM_001178111	chr15,chr15	-,+	RPP25,SCAMP5	-2392,34836
chr12:39992361-39994028	chr12	+	39992491	39994049	True	NM_001031748,NM_005164	chr12,chr12	+,-	C12orf40,ABCD2	25922,19858
chr9:72285328-72286458	chr9	+	72285449	72286499	True	NM_001163,NM_001010940	chr9,chr9	-,+	APBA1,C9orf135	826,149231
chr5:177030920-177031181	chr5	+	177030991	177031227	True	NR_024019,NM_007255	chr5,chr5	-,+	FAM193B,B4GALT7	-49443,-3923
chr5:141337251-141337531	chr5	+	141337270	141337572	True	NM_016580,NM_183399,NM_001201365	chr5,chr5,chr5	-,+,+	PCDH12,RNF14,RNF14	1105,8829,8829
chr1:27479849-27480629	chr1	+	27479867	27480607	True	NM_015023,NM_003047	chr1,chr1	+,-	WDTC1,SLC9A1	80399,894
chr5:140776109-140777539	chr5	+	140776210	140777585	True	NM_018925,NM_018921,NM_003736,NM_032099,NM_032098,NM_032088,NM_032089,NM_005642,NM_014004	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,+,-,+	PCDHGB5,PCDHGA9,PCDHGB4,PCDHGB5,PCDHGB4,PCDHGA8,PCDHGA9,TAF7,PCDHGA8	109,4934,-8818,109,-8818,-4787,4934,-75859,-4787
chr18:61777014-61777651	chr18	+	61777029	61777697	True	NR_027245,NR_033881	chr18,chr18	-,+	C18orf20,LOC284294	38619,-5755
chr5:80530329-80531390	chr5	+	80530410	80531358	True	NM_001099736,NM_001099735,NM_001825,NR_034121	chr5,chr5,chr5,chr5	+,+,+,-	CKMT2,CKMT2,CKMT2,LOC100131067	-1322,-1322,-1322,66080
chr3:52697997-52698605	chr3	+	52698269	52698430	True	NM_014366,NM_018165	chr3,chr3	+,-	GNL3,PBRM1	21505,15362
chr16:20080424-20081006	chr16	+	20080558	20080980	True	NM_001002911,NM_017888	chr16,chr16	-,+	GPR139,ACSM5	4170,339875
chr9:114463928-114465357	chr9	+	114464020	114465011	True	NM_001080551,NM_001198664	chr9,chr9	-,+	C9orf84,GNG10	56859,-40224
chr1:152084930-152085317	chr1	+	152084967	152085317	True	NR_024237,NM_007113	chr1,chr1	+,-	LOC100132111,TCHH	-274073,1289
chr14:23908250-23908570	chr14	+	23908273	23908555	True	NM_000257,NM_001042635	chr14,chr14	-,+	MYH7,NGDN	-3403,30342
chrX:150912117-150913044	chrX	+	150912133	150913074	True	NR_029973,NM_005140	chrX,chrX	-,+	MIR452,CNGA2	215161,-8966
chr17:27073669-27074129	chr17	+	27073714	27074150	True	NM_004295,NM_001160407	chr17,chr17	+,-	TRAF4,TLCD1	-2742,-19765
chr15:59666249-59667410	chr15	+	59666361	59667211	True	NM_152450,NM_004998	chr15,chr15	+,-	FAM81A,MYO1E	63160,-1290
chr6:31995629-31997398	chr6_dbb_hap3	+	3275782	3275856	False	NR_001284,NM_001128590,NM_032454,NM_032470,NM_007293,NM_004197,NM_000500,NM_001002029	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	-,+,+,-,+,+,+,+	TNXA,CYP21A2,STK19,TNXB,C4A,STK19,CYP21A2,C4B	-9399,9452,-8732,-9149,-7678,-8732,9452,-7678
chr6:31995629-31997398	chr6	+	31996566	31996640	True	NM_001128590,NM_000500,NM_032470	chr6,chr6,chr6	+,+,-	CYP21A2,CYP21A2,TNXB	9452,9452,-15516
chr6:31995629-31997398	chr6_ssto_hap7	+	3296538	3296612	False	NR_001284,NM_001128590,NM_000500	chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7	-,+,+	TNXA,CYP21A2,CYP21A2	16948,9456,9456
chr6:31995629-31997398	chr6_ssto_hap7	+	3329276	3329350	False	NM_001002029,NM_032470	chr6_ssto_hap7,chr6_ssto_hap7	+,-	C4B,TNXB	-14045,-15516
chr6:31995629-31997398	chr6_cox_hap2	+	3467217	3467291	False	NM_001128590,NM_001002029,NR_001284,NM_007293,NM_000500	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,+,-,+,+	CYP21A2,C4B,TNXA,C4A,CYP21A2	9452,-7678,17064,-7678,9452
chrX:153687066-153687271	chrX	+	153687135	153687199	True	NM_017514,NM_006014	chrX,chrX	+,-	PLXNA3,LAGE3	-563,20447
chr16:66912251-66912887	chr16	+	66912360	66912869	True	NM_020786,NM_001204744	chr16,chr16	+,-	PDP2,CDH16	1513,40075
chrY:10037466-10037676	chrY	+	10037478	10037692	True	NR_003593,NR_003589	chrY,chrY	+,-	TTTY23B,TTTY1B	-289122,-425550
chr22:25379311-25380042	chr22	+	25379391	25379665	True	NM_001145206,NM_001001663	chr22,chr22	+,-	KIAA1671,TMEM211	44275,-44077
chr19:4533266-4534315	chr19	+	4533435	4534337	True	NM_052972,NM_032631,NM_001013706	chr19,chr19,chr19	-,+,-	LRG1,HDGFRP2,PLIN5	5749,-61231,921
chr9:73027215-73027479	chr9	+	73027280	73027350	True	NM_001206,NM_015110	chr9,chr9	-,+	KLF9,SMC5	2273,-153454
chr1:183447870-183448823	chr1	+	183447897	183448745	True	NM_201569,NM_201568,NM_173156,NM_001174061,NM_015039	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	SMG7,SMG7,SMG7,SMG7,NMNAT2	-6453,-6453,-6453,-6453,-60263
chr2:219282678-219283378	chr2	+	219283046	219283286	True	NM_007127,NM_022152	chr2,chr2	+,-	VIL1,TMBIM1	551,-125766
chr12:7035259-7035794	chr12	+	7035391	7035639	True	NM_001940,NM_001007026,NR_003010	chr12,chr12,chr12	+,+,-	ATN1,ATN1,SCARNA12	1840,-1816,41180
chr5:154094915-154095770	chr5	+	154095111	154095585	True	NM_015315,NR_036094	chr5,chr5	+,-	LARP1,MIR3141	-2701,-119479
chr21:41126708-41128535	chr21	+	41126760	41128303	True	NR_026543,NM_001080444	chr21,chr21	-,+	C21orf88,IGSF5	-142011,-9478
chr9:138454571-138454880	chr9	+	138454578	138454900	True	NM_144654,NM_002571,NM_001018049	chr9,chr9,chr9	-,+,+	C9orf116,PAEP,PAEP	-62817,-1025,-1025
chr20:13052231-13052980	chr20	+	13052339	13052989	True	NM_018327,NM_017714	chr20,chr20	+,-	SPTLC3,TASP1	-62765,566644
chr12:52711587-52712875	chr12	+	52711694	52712650	True	NM_002284,NM_002282	chr12,chr12	+,-	KRT86,KRT83	-16096,2582
chr7:44142065-44142626	chr7	+	44142088	44142518	True	NM_013284,NM_001129	chr7,chr7	-,+	POLM,AEBP1	-19959,1441
chrX:24762050-24762991	chrX	+	24762344	24762751	True	NM_001163264,NR_003007	chrX,chrX	-,+	PCYT1B,SCARNA23	-71365,42
chr1:55266953-55267264	chr1	+	55267016	55267168	True	NM_152607,NM_001114108,NM_001110533,NM_017904	chr1,chr1,chr1,chr1	+,-,+,-	C1orf177,TTC22,C1orf177,TTC22	4567,-75,4567,-75
chr2:749480-750811	chr2	+	749602	750133	True	NM_018968,NM_152834	chr2,chr2	+,-	SNTG2,TMEM18	196420,-72163
chr4:100814396-100815172	chr4	+	100814438	100815184	True	NM_021970,NR_024170,NR_002799	chr4,chr4,chr4	-,-,+	LAMTOR3,LAMTOR3,LOC256880	569,569,56451
chr3:195941857-195942296	chr3	+	195941933	195942287	True	NM_001039617,NM_152672	chr3,chr3	-,+	ZDHHC19,OSTalpha	-3633,1095
chr5:68665938-68666325	chr5	+	68665946	68666177	True	NM_003187,NM_002873,NM_133340,NM_133338,NM_133339,NM_001015892,NM_001015891,NM_133344,NM_133341,NM_016283,NM_133343,NM_133342	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,+,+,+,+,-,-,+,+,-,+,+	TAF9,RAD17,RAD17,RAD17,RAD17,TAF9,TAF9,RAD17,RAD17,TAF9,RAD17,RAD17	-537,354,684,-365,1103,-106,-106,-365,684,-537,-880,-365
chr13:27134249-27134887	chr13	+	27134262	27134843	True	NM_005288,NM_006646	chr13,chr13	-,+	GPR12,WASF3	200129,-2473
chr1:243418592-243418830	chr1	+	243418613	243418879	True	NM_006642,NM_001042405,NM_001042404,NM_014812	chr1,chr1,chr1,chr1	+,-,-,-	SDCCAG8,CEP170,CEP170,CEP170	427,-33,-33,-33
chr4:4146781-4147532	chr4	+	4147366	4147556	True	NM_145291,NM_177998	chr4,chr4	+,-	ZBTB49,OTOP1	144367,81115
chr2:201828591-201828834	chr2	+	201828602	201828687	True	NR_033915,NM_001142356,NM_006190	chr2,chr2,chr2	-,+,-	ORC2,NIF3L1,ORC2	-178,-72012,-178
chr12:14714579-14714943	chr12	+	14714806	14714998	True	NM_024829,NM_018179	chr12,chr12	-,+	PLBD1,ATF7IP	5851,-196247
chr12:19565505-19565808	chr12	+	19565653	19565726	True	NM_033123,NM_001114176	chr12,chr12	-,+	PLCZ1,AEBP2	-674735,26881
chr8:144978351-144978955	chr8	+	144978452	144978694	True	NM_000837,NM_031308	chr8,chr8	+,-	GRINA,EPPK1	85531,-31018
chr15:81426699-81427697	chr15	+	81426784	81427703	True	NM_015154,NM_173528	chr15,chr15	-,+	MESDC2,C15orf26	-144579,-191
chr4:55967682-55968169	chr4	+	55968049	55968207	True	NM_024592,NM_002253	chr4,chr4	+,-	SRD5A3,KDR	244180,23605
chr11:107047002-107047233	chr11	+	107047001	107047259	True	NM_001130037,NM_000855	chr11,chr11	+,-	ELMOD1,GUCY1A2	414557,-157830
chr3:127844151-127845195	chr3	+	127844279	127844972	True	NM_021937,NM_003707	chr3,chr3	+,-	EEFSEC,RUVBL1	27340,-1608
chr18:21723952-21724518	chr18	+	21724149	21724447	True	NM_012189,NM_138643,NM_018030,NM_138644,NM_153770,NM_153769,NM_153768	chr18,chr18,chr18,chr18,chr18,chr18,chr18	+,+,-,+,+,+,+	CABYR,CABYR,OSBPL1A,CABYR,CABYR,CABYR,CABYR	-5253,-5253,127799,-4760,-5253,-5253,-5253
chr16:19531938-19532564	chr16	+	19532124	19532607	True	NM_001199022,NM_014711,NM_016641	chr16,chr16,chr16	+,+,-	CP110,CP110,GDE1	2571,2571,898
chr2:209291650-209293529	chr2	+	209291712	209293367	True	NM_005896,NM_005048	chr2,chr2	-,+	IDH1,PTH2R	-171906,-20212
chr11:10711859-10712817	chr11	+	10712004	10712834	True	NM_001100167,NM_130385,NM_014633,NM_001100163	chr11,chr11,chr11,chr11	-,-,+,-	MRVI1,MRVI1,CTR9,MRVI1	2321,2751,59976,2751
chr2:61699126-61699816	chr2	+	61699153	61699545	True	NM_014709,NM_152392	chr2,chr2	-,+	USP34,AHSA2	-1304,-294657
chr5:69711213-69711822	chr5	+	69711413	69711701	True	NR_033417,NR_033968	chr5,chr5	+,-	GTF2H2B,LOC100049076	-267,139499
chr5:69711213-69711822	chr5	+	68856266	68856554	False	NR_027439,NM_001042490,NM_001098728	chr5,chr5,chr5	-,+,+	LOC100272216,GTF2H2D,GTF2H2C	72524,-243,-266
chr5:69711213-69711822	chr5	-	70362996	70363284	False	NM_022877,NM_001515	chr5,chr5	+,-	SMN2,GTF2H2	-142279,263
chr6:110012158-110012393	chr6	+	110012187	110012434	True	NM_145025,NM_001145128,NM_014845	chr6,chr6,chr6	-,-,+	AKD1,AKD1,FIG4	31,31,-11
chr1:226185801-226186575	chr1	+	226186092	226186621	True	NM_152608,NM_002107	chr1,chr1	-,+	C1orf55,H3F3A	496,63786
chr18:31272853-31274734	chr18	+	31273070	31274706	True	NM_030632,NM_198995	chr18,chr18	+,-	ASXL3,C18orf34	-114587,-252385
chr1:109823792-109824276	chr1	+	109823836	109824274	True	NM_001408,NM_001005290,NM_032636,NM_001032291	chr1,chr1,chr1,chr1	+,-,-,-	CELSR2,PSRC1,PSRC1,PSRC1	-31246,1566,1566,1566
chr12:113346441-113346757	chr12	+	113346447	113346757	True	NM_001032409,NM_002534,NM_001193521,NM_016816	chr12,chr12,chr12,chr12	+,+,-,+	OAS1,OAS1,RASAL1,OAS1	-1759,-1759,226852,-1759
chrX:48555861-48557629	chrX	+	48556313	48557648	True	NM_013271,NM_003173	chrX,chrX	-,+	PCSK1N,SUV39H1	136362,-1240
chr7:132745388-132745901	chr7	+	132745713	132745895	True	NM_001037126,NM_017812	chr7,chr7	+,-	EXOC4,CHCHD3	191927,20983
chr15:48413047-48413953	chr15	+	48413062	48413962	True	NM_205850,NM_016132	chr15,chr15	+,-	SLC24A5,MYEF2	-30,56646
chr15:91471411-91472715	chr15	+	91471588	91472475	True	NM_018671,NM_001039675,NM_198527	chr15,chr15,chr15	+,+,-	UNC45A,UNC45A,HDDC3	5739,934,3356
chr7:37014701-37015306	chr7	+	37014722	37015194	True	NM_001039459,NM_018685	chr7,chr7	-,+	ELMO1,ANLN	9533,-585349
chr4:2199770-2200027	chr4	+	2199803	2200063	True	NM_181808,NM_178557	chr4,chr4	-,+	POLN,NAT8L	30945,-138615
chr5:140739890-140740470	chr5	+	140739940	140740426	True	NM_018924,NM_032097,NM_018923,NM_032096,NM_032054,NM_018918,NM_032053,NM_005642,NM_018917	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,+,-,+	PCDHGB3,PCDHGB3,PCDHGB2,PCDHGB2,PCDHGA5,PCDHGA5,PCDHGA4,TAF7,PCDHGA4	9535,9535,-288,-288,3471,3471,-5223,-39589,-5223
chr20:55928576-55929407	chr20	+	55928578	55929300	True	NM_001190472,NM_001015885,NM_003610	chr20,chr20,chr20	-,+,+	MTRNR2L3,RAE1,RAE1	5628,-2011,-2484
chr9:111766409-111766920	chr9	+	111766481	111766755	True	NM_003798,NM_017832	chr9,chr9	-,+	CTNNAL1,C9orf6	9059,-69868
chr10:118763060-118763521	chr10	+	118763064	118763330	True	NM_018330,NM_181840,NM_001127211	chr10,chr10,chr10	-,+,-	KIAA1598,KCNK18,KIAA1598	1808,193669,1808
chr5:694640-694882	chr5	+	694703	694883	True	NM_018140,NM_007030	chr5,chr5	+,-	CEP72,TPPP	-82349,-1193
chr5:694640-694882	chr5	+	786035	786215	False	NM_001166260,NM_024786	chr5,chr5	+,-	TRIP13,ZDHHC11	106753,64936
chr13:61989233-61989473	chr13	+	61989316	61989435	True	NM_022843,NM_001146070	chr13,chr13	-,+	PCDH20,TDRD3	271,-1017940
chr2:228036700-228037461	chr2	+	228036732	228037158	True	NM_000091,NM_000092	chr2,chr2	+,-	COL4A3,COL4A4	-7510,-7457
chr1:6443855-6445331	chr1	+	6444244	6445130	True	NM_007274,NM_181864,NM_031475	chr1,chr1,chr1	-,-,+	ACOT7,ACOT7,ESPN	8746,803,39717
chr14:103023395-103023801	chr14	+	103023402	103023796	True	NM_152326,NR_036192	chr14,chr14	-,+	ANKRD9,MIR4309	-47274,-17472
chr20:51589728-51589946	chr20	+	51589799	51589893	True	NM_006526,NM_173485	chr20,chr20	-,+	ZNF217,TSHZ2	609793,-904
chr22:39051458-39051881	chr22	+	39051682	39051930	True	NM_001002880,NM_001013647,NM_015373	chr22,chr22,chr22	+,-,+	CBY1,LOC646851,CBY1	727,754,727
chr16:1383108-1383473	chr16	+	1383258	1383328	True	NM_003933,NM_001001410,NM_001199099,NM_001199098,NM_001199097,NM_001199096	chr16,chr16,chr16,chr16,chr16,chr16	+,-,+,+,+,+	BAIAP3,C16orf42,BAIAP3,BAIAP3,BAIAP3,BAIAP3	1176,18595,277,277,277,2869
chr7:38724012-38725355	chr7	+	38724208	38725320	True	NR_028347,NM_001166018	chr7,chr7	-,+	FAM183B,POU6F2	1419,292288
chr6:35991925-35992207	chr6	+	35991996	35992142	True	NM_052961,NM_001193476,NM_001315,NM_139014,NM_139013,NM_139012,NM_138718	chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,-,+,+,+,+,-	SLC26A8,SLC26A8,MAPK14,MAPK14,MAPK14,MAPK14,SLC26A8	321,213,3311,3311,3311,3311,185
chr2:172623194-172624844	chr2	+	172623335	172624856	True	NM_003705,NM_001378	chr2,chr2	-,+	SLC25A12,DYNC1I2	126014,-79413
chr14:76004527-76004759	chr14	+	76004635	76004781	True	NM_006399,NM_007176	chr14,chr14	+,-	BATF,C14orf1	-15909,122807
chr2:32504771-32505539	chr2	+	32504771	32505181	True	NM_032312,NM_021209	chr2,chr2	+,-	YIPF4,NLRC4	-1868,-13959
chr13:107176081-107177828	chr13	+	107176225	107177790	True	NM_004093,NR_034119	chr13,chr13	-,+	EFNB2,LOC728192	9649,-147366
chr15:41120709-41121940	chr15	+	41121083	41121705	True	NM_017726,NM_003710,NM_001130143	chr15,chr15,chr15	-,+,-	PPP1R14D,SPINT1,PPP1R14D	-176,14540,-176
chr2:26619506-26621007	chr2	+	26619764	26620755	True	NM_153835,NM_145038	chr2,chr2	-,+	GPR113,CCDC164	-50079,4028
chr18:33277405-33278668	chr18	+	33277741	33278595	True	NM_194281,NM_020474	chr18,chr18	-,+	INO80C,GALNT1	-199786,-43268
chr11:7529494-7530821	chr11	+	7529840	7530816	True	NM_003621,NM_016229	chr11,chr11	+,-	PPFIBP2,CYB5R2	4184,164055
chr19:52553848-52554453	chr19	+	52553848	52554008	True	NM_024840,NM_014650	chr19,chr19	+,-	ZNF613,ZNF432	-123211,-1775
chr19:51326825-51328310	chr19	+	51327457	51328031	True	NM_138564,NM_001030050,NM_138563,NM_002257,NM_017509	chr19,chr19,chr19,chr19,chr19	-,+,-,-,-	KLK15,KLK3,KLK15,KLK1,KLK15	6798,30139,6798,-414,6798
chr6:137245025-137245234	chr6	+	137245045	137245281	True	NR_027994,NM_001008783	chr6,chr6	-,+	NHEG1,SLC35D3	69137,-1694
chr1:42620093-42620361	chr1	+	42620114	42620400	True	NM_007102,NM_033553	chr1,chr1	+,-	GUCA2B,GUCA2A	-1073,10045
chr6:43425912-43426173	chr6	+	43426160	43426220	True	NM_023932,NM_206539,NM_001146016	chr6,chr6,chr6	-,-,+	DLK2,DLK2,TJAP1	-2874,-2374,19040
chr19:10219928-10220418	chr19	+	10220056	10220412	True	NM_002566,NM_031917,NM_001198690,NR_003688,NR_004381,NM_001040664,NM_020230	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+,+	P2RY11,ANGPTL6,PPAN-P2RY11,SNORD105B,SNORD105,PPAN-P2RY11,PPAN	1784,-6631,-3209,12,-1781,-3209,-3209
chr10:111771576-111773019	chr10	+	111771576	111772824	True	NM_001121,NM_019903,NR_030724,NM_016824	chr10,chr10,chr10,chr10	+,+,-,+	ADD3,ADD3,XPNPEP1,ADD3	-3916,-5901,-88265,-3916
chr17:8815913-8816227	chr17	+	8816020	8816242	True	NM_004822,NM_014308	chr17,chr17	+,-	NTN1,PIK3R5	108616,-186
chr19:50017748-50018041	chr19	+	50017748	50017810	True	NM_004107,NM_001136019,NR_029703	chr19,chr19,chr19	+,+,-	FCGRT,FCGRT,MIR150	-1363,-2263,-13623
chr18:29522461-29522687	chr18	+	29522550	29522726	True	NM_014939,NM_017831	chr18,chr18	-,+	TRAPPC8,RNF125	415,75718
chr2:107502012-107502656	chr2	+	107502012	107502486	True	NM_001142352,NM_032528,NM_001142351,NR_003506	chr2,chr2,chr2,chr2	-,-,-,+	ST6GAL2,ST6GAL2,ST6GAL2,PLGLA	1127,1127,174,-499294
chr1:86045934-86046405	chr1	+	86045936	86046402	True	NM_001554,NM_001134445	chr1,chr1	+,-	CYR61,DDAH1	41,-1890
chr9:5654337-5655458	chr9	+	5654928	5655222	True	NM_024896,NM_020829	chr9,chr9	-,+	ERMP1,KIAA1432	177919,1360
chr11:66886139-66886564	chr11	+	66886355	66886587	True	NM_012308,NM_001040716,NR_027473	chr11,chr11,chr11	+,-,+	KDM2A,PC,KDM2A	152,-160508,152
chr20:56196226-56196779	chr20	+	56196353	56196809	True	NM_030776,NM_001160417,NM_001160419,NM_001160418,NM_002591	chr20,chr20,chr20,chr20,chr20	-,-,-,-,+	ZBP1,ZBP1,ZBP1,ZBP1,PCK1	-721,-721,-721,-721,-60267
chr6:3121131-3121691	chr6	+	3121137	3121474	True	NR_026648,NR_026649,NR_026650,NM_001069,NM_004332	chr6,chr6,chr6,chr6,chr6	+,+,+,-,+	BPHL,BPHL,BPHL,TUBB2A,BPHL	-2262,-2262,-2262,36370,-2262
chr18:9332432-9333542	chr18	+	9332646	9333532	True	NM_020648,NM_001042388	chr18,chr18	+,-	TWSG1,PPP4R1	1232,281118
chr17:79314308-79314679	chr17	+	79314431	79314499	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	59040,-9957
chr1:1847053-1847332	chr1	+	1847129	1847267	True	NM_138705,NM_178545	chr1,chr1	+,-	CALML6,TMEM52	-914,3523
chr6:117116127-117116459	chr6	+	117116129	117116486	True	NM_001085480,NM_173560	chr6,chr6	-,+	FAM162B,RFX6	-29243,81889
chr9:44760378-44761524	chr9	+	44760377	44760781	True	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	229454,-1129647
chr9:44760378-44761524	chr9	+	67681638	67681688	False	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	112551,245072
chr9:44760378-44761524	chr9	-	47167769	47168055	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-3537039,-480254
chr1:226021827-226023383	chr1	+	226022217	226022512	True	NM_000120,NM_014698	chr1,chr1	+,-	EPHX1,TMEM63A	-9266,47958
chr7:23227685-23228192	chr7	+	23227731	23228141	True	NM_032581,NM_007342	chr7,chr7	-,+	FAM126A,NUPL2	-173961,-6337
chr3:155855638-155856094	chr3	+	155855684	155856111	True	NM_003471,NM_004733	chr3,chr3	+,-	KCNAB1,SLC33A1	4639,-283436
chr11:538597-540288	chr11	+	538635	539773	True	NM_176795,NM_001130442,NM_005343,NM_198075	chr11,chr11,chr11,chr11	-,-,-,+	HRAS,HRAS,HRAS,LRRC56	-3085,-3085,-3085,-1164
chr17:882718-883021	chr17	+	882792	882902	True	NM_022463,NM_013337	chr17,chr17	-,+	NXN,TIMM22	158,17454
chr1:94345042-94345831	chr1	+	94345058	94345752	True	NM_014597,NR_030621	chr1,chr1	-,+	DNTTIP2,MIR760	-296,-32727
chr19:39988912-39989291	chr19	+	39988911	39989319	True	NM_016941,NM_152361,NM_203486	chr19,chr19,chr19	+,-,+	DLL3,EID2B,DLL3	237,34225,237
chr3:19976525-19977126	chr3	+	19976688	19976896	True	NM_144715,NM_004162	chr3,chr3	-,+	EFHB,RAB5A	-982,11675
chr4:71342539-71342846	chr4	+	71342544	71342858	True	NM_144646,NM_001145007,NM_152291	chr4,chr4,chr4	-,+,+	IGJ,MUC7,MUC7	189546,-4920,-4761
chr10:43887198-43887473	chr10	+	43887241	43887386	True	NM_001098208,NM_173160,NM_001098207	chr10,chr10,chr10	-,+,-	HNRNPF,FXYD4,HNRNPF	4944,-20207,5459
chr4:184427201-184427478	chr4	+	184427371	184427491	True	NR_033995,NM_001564	chr4,chr4	-,+	LOC389247,ING2	-1703,-1202
chr19:15235510-15235929	chr19	+	15235520	15235946	True	NM_006844,NM_033025	chr19,chr19	-,+	ILVBL,SYDE1	681,-17357
chr5:175793406-175793715	chr5	+	175793532	175793602	True	NM_173664,NM_001079685,NM_001079684,NM_020444	chr5,chr5,chr5,chr5	+,-,-,-	ARL10,KIAA1191,KIAA1191,KIAA1191	-1081,-4723,-4723,-4723
chr10:7452967-7453453	chr10	+	7452982	7453452	True	NM_002216,NM_001018039,NM_001029880	chr10,chr10,chr10	+,-,-	ITIH2,SFMBT2,SFMBT2	291783,-1679,46
chr2:86565478-86565715	chr2	+	86565530	86565596	True	NM_018433,NM_001164730,NM_001164731,NM_001164732,NM_022912	chr2,chr2,chr2,chr2,chr2	+,-,-,-,-	KDM3A,REEP1,REEP1,REEP1,REEP1	102674,-324,-753,-753,-753
chr17:5096862-5097801	chr17	+	5097685	5097797	True	NM_032530,NR_034082	chr17,chr17	-,+	ZNF594,LOC100130950	-2507,-2370
chr4:49180664-49181689	chr4	+	49180886	49180974	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-192672,-272071
chr8:144923287-144923619	chr8	+	144923318	144923663	True	NR_033849,NM_178564	chr8,chr8	+,-	LOC100128338,NRBP2	-107059,-172
chr12:130391143-130391417	chr12	+	130391194	130391435	True	NM_133448,NM_007197	chr12,chr12	-,+	TMEM132D,FZD10	-2982,255568
chr1:60518565-60519085	chr1	+	60518695	60519108	True	NM_015888,NM_152377	chr1,chr1	+,-	HOOK1,C1orf87	-238213,20387
chrX:49369169-49370234	chrX	+	49369699	49370243	True	NM_003785,NM_001040663,NM_001468	chrX,chrX,chrX	-,+,+	PAGE1,GAGE1,GAGE1	90403,-6141,-6141
chrX:48644015-48644404	chrX	+	48644067	48644389	True	NM_002049,NM_013271	chrX,chrX	+,-	GATA1,PCSK1N	592,49621
chr13:76099944-76100853	chr13	+	76100048	76100762	True	NM_203495,NM_006002	chr13,chr13	-,+	COMMD6,UCHL3	11286,23164
chr17:30675229-30676181	chr17	+	30675490	30676228	True	NM_001098507,NM_022344,NR_030362,NM_001032293,NM_003457	chr17,chr17,chr17,chr17,chr17	+,-,+,+,+	ZNF207,C17orf75,MIR632,ZNF207,ZNF207	928,-6301,899,928,928
chr5:138726599-138727714	chr5	+	138726785	138727633	True	NM_001033112,NM_016459,NM_005847,NM_152685,NM_001161546	chr5,chr5,chr5,chr5,chr5	+,-,-,-,-	PAIP2,MZB1,SLC23A1,SLC23A1,LOC389333	-48702,-1180,-7746,-7746,3302
chr21:45991852-45992073	chr21	+	45991858	45992106	True	NM_198694,NM_198687	chr21,chr21	-,+	KRTAP10-5,KRTAP10-4	8425,1499
chr11:6667904-6668554	chr11	+	6667903	6668517	True	NM_001014795,NM_003737	chr11,chr11	+,-	ILK,DCHS1	-42747,8607
chr16:66969643-66969860	chr16	+	66969645	66969751	True	NM_016062,NM_003869,NM_198061,NR_036684,NR_024525	chr16,chr16,chr16,chr16,chr16	-,+,+,+,-	FAM96B,CES2,CES2,CES2,FAM96B	-1325,-1349,-1349,-1322,-1325
chr16:66969643-66969860	chr16	+	66982693	66982799	False	NM_001185177,NR_024525	chr16,chr16	+,-	CES3,FAM96B	12332,-14373
chr7:55433358-55433671	chr7	+	55433433	55433647	True	NM_018697,NM_030796	chr7,chr7	+,-	LANCL2,VOPP1	-343,206603
chr15:90194622-90196399	chr15	+	90195133	90196435	True	NM_020212,NM_198525	chr15,chr15	+,-	WDR93,KIF7	37592,2297
chr12:9603397-9604111	chr12	+	9603684	9604163	True	NR_033399,NR_024374	chr12,chr12	-,+	DDX12,LOC642846	-2916,-167482
chr12:9603397-9604111	chr12	-	31223629	31223685	False	NM_004399,NM_001135811,NM_030653,NM_152438	chr12,chr12,chr12,chr12	+,-,+,+	DDX11,FAM60A,DDX11,DDX11	3093,255492,3093,3093
chr10:43939594-43939945	chr10	+	43939678	43939916	True	NR_026693,NM_001098204	chr10,chr10	+,-	ZNF487P,HNRNPF	-7164,-34982
chr1:145237841-145239125	chr1	+	145238145	145238789	True	NM_203458,NM_022359	chr1,chr1	+,-	NOTCH2NL,PDE4DIP	-29098,-161959
chr1:145237841-145239125	chr1	-	120582642	120583286	False	NM_024408,NM_001100910	chr1,chr1	-,+	NOTCH2,FAM72B	29094,255718
chr1:37938014-37939600	chr1	+	37938178	37939580	True	NM_022756,NM_025079	chr1,chr1	-,+	MEAF6,ZC3H12A	40834,538
chr10:91740728-91741467	chr10	+	91740894	91741374	True	NR_026835,NM_016195	chr10,chr10	-,+	FLJ37201,KIF20B	-283209,-279591
chr5:179072185-179072789	chr5	+	179072210	179072796	True	NM_001024649,NM_001142306	chr5,chr5	+,-	CANX,C5orf60	53133,-163
chr6:32794044-32795625	chr6_qbl_hap6	+	4027627	4027773	False	NM_018833,NR_037173	chr6_qbl_hap6,chr6_qbl_hap6	-,+	TAP2,LOC100507463	10932,16196
chr6:32794044-32795625	chr6_mcf_hap5	+	4132409	4132555	False	NM_002120,NR_037173	chr6_mcf_hap5,chr6_mcf_hap5	-,+	HLA-DOB,LOC100507463	-10683,16184
chr6:32794044-32795625	chr6_mann_hap4	+	4252716	4252862	False	NM_018833,NR_037173	chr6_mann_hap4,chr6_mann_hap4	-,+	TAP2,LOC100507463	10932,16196
chr6:32794044-32795625	chr6	+	32795521	32795667	True	NM_002120,NR_037173	chr6,chr6	-,+	HLA-DOB,LOC100507463	-10696,16195
chr6:32794044-32795625	chr6_cox_hap2	+	4240050	4240196	False	NM_002120,NR_037173	chr6_cox_hap2,chr6_cox_hap2	-,+	HLA-DOB,LOC100507463	-10695,16194
chr22:38863696-38863903	chr22	+	38863728	38863926	True	NM_016657,NM_006855,NM_152868	chr22,chr22,chr22	+,+,-	KDELR3,KDELR3,KCNJ4	156,156,-12525
chrY:21902792-21903855	chrY	+	21903066	21903805	True	NM_032576,NM_001146705,NM_004653,NM_001146706	chrY,chrY,chrY,chrY	+,-,-,-	CYorf15B,KDM5D,KDM5D,KDM5D	-144687,3070,3070,3070
chr7:102396824-102397231	chr7	+	102397162	102397280	True	NM_032959,NR_026879,NM_001145269,NM_001145268	chr7,chr7,chr7,chr7	-,+,+,+	POLR2J2,FAM185A,FAM185A,FAM185A	-84980,-7820,-7820,-7820
chr7:102396824-102397231	chr7	-	76743818	76743936	False	NM_020879,NM_006682	chr7,chr7	+,-	CCDC146,FGL2	7997,85270
chr20:746223-747154	chr20	+	746369	747079	True	NM_033409,NM_001042353	chr20,chr20	-,+	C20orf54,FAM110A	2199,67276
chr1:197115988-197116556	chr1	+	197116043	197116329	True	NM_018136,NM_001193640	chr1,chr1	-,+	ASPM,CRB1	-219,121004
chr3:12328220-12329068	chr3	+	12328224	12328901	True	NM_003256,NM_138712,NM_005037,NM_138711	chr3,chr3,chr3,chr3	-,+,+,+	TIMP4,PPARG,PPARG,PPARG	-127373,447,447,1534
chr5:134791667-134792327	chr5	+	134791698	134792332	True	NM_145282,NM_130848,NM_001099221	chr5,chr5,chr5	+,-,-	SLC25A48,C5orf20,TIFAB	378032,-8660,-3609
chrX:92950731-92951639	chrX	+	92950961	92951534	True	NM_004538,NM_173698	chrX,chrX	-,+	NAP1L3,FAM133A	-22279,-22013
chr12:28123936-28124477	chr12	+	28124023	28124501	True	NM_020782,NM_002820,NM_198966,NM_198964,NM_198965	chr12,chr12,chr12,chr12,chr12	+,-,-,-,-	KLHDC5,PTHLH,PTHLH,PTHLH,PTHLH	-190887,465,-1129,-1129,465
chr4:8174863-8175439	chr4	+	8175192	8175374	True	NM_001130088,NM_018986	chr4,chr4	-,+	ABLIM2,SH3TC1	-14633,25685
chrM:5768-6263	chr1	+	566467	566691	False	NM_001005221,NR_015368	chr1,chr1	-,+	OR4F29,LOC643837	55405,196372
chr4:125383867-125384290	chr4	+	125384072	125384282	True	NM_020337,NR_027106	chr4,chr4	-,+	ANKRD50,LOC285419	249655,-688704
chr13:41527405-41528085	chr13	+	41527546	41528124	True	NM_007187,NM_001145353	chr13,chr13	+,-	WBP4,ELF1	107572,28344
chr22:24347592-24348533	chr22	+	24347700	24348350	True	NM_001144931,NR_003081	chr22,chr22	+,-	LOC391322,GSTTP1	24766,-442
chr7:152453787-152455487	chr7	+	152453948	152455312	True	NM_005431,NM_020445,NM_001040135	chr7,chr7,chr7	-,+,+	XRCC2,ACTR3B,ACTR3B	-80698,1538,1538
chr1:11722163-11722919	chr1	+	11722280	11722721	True	NM_001014765,NM_012168,NM_018438,NM_033182,NM_183412,NM_183413	chr1,chr1,chr1,chr1,chr1,chr1	+,-,+,+,+,+	FBXO44,FBXO2,FBXO6,FBXO44,FBXO44,FBXO44	-7417,-7392,1428,-7417,-7899,-7417
chr12:21612512-21613448	chr12	+	21612525	21613284	True	NM_002907,NM_024854	chr12,chr12	-,+	RECQL,PYROXD1	41376,-22039
chr9:136244255-136245226	chr9	+	136244745	136245163	True	NM_153710,NM_033161	chr9,chr9	+,-	C9orf96,SURF4	-1512,-1775
chr17:46982370-46983292	chr17	+	46982531	46983110	True	NM_023079,NM_007241	chr17,chr17	+,-	UBE2Z,SNF8	2620,39103
chr9:136503205-136504065	chr9	+	136503246	136503946	True	NM_000787,NM_001080515	chr9,chr9	+,-	DBH,FAM163B	-1819,-57878
chr14:24615467-24615819	chr14	+	24615471	24615845	True	NM_017999,NM_016049,NM_002818	chr14,chr14,chr14	+,-,-	RNF31,FAM158A,PSME2	813,-4674,60
chr11:50373172-50374994	chr11	+	50373391	50375039	True	NR_024504,NR_003034	chr11,chr11	+,-	LOC646813,LOC441601	-5124,-115758
chr11:803979-804254	chr11	+	804017	804211	True	NM_145887,NM_145886,NM_024698,NM_001191060,NM_001191061,NM_001004,NR_002585	chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,-,+,+	LRDD,LRDD,SLC25A22,SLC25A22,SLC25A22,RPLP2,SNORA52	1089,1089,-7754,-6022,-5748,5724,7469
chr4:84462293-84464278	chr4	+	84462304	84464293	True	NM_032717,NM_139076	chr4,chr4	+,-	AGPAT9,FAM175A	-4707,-56014
chr6:41175849-41176547	chr6	+	41175857	41176486	True	NM_024807,NM_198153,NR_027256	chr6,chr6,chr6	-,+,-	TREML2,TREML4,TREML3	-6932,19575,9250
chr16:31734595-31735728	chr16	+	31734679	31735431	True	NR_027011,NM_001130913	chr16,chr16	-,+	CSDAP1,ZNF720	-153834,-10180
chr13:54880689-54882177	chr13	+	54881142	54881454	True	NR_031628,NM_006418	chr13,chr13	-,+	MIR1297,OLFM4	4783,-1278325
chr3:138663398-138663627	chr3	+	138663452	138663577	True	NM_001040061,NM_023067	chr3,chr3	+,-	C3orf72,FOXL2	2498,2462
chr2:208546432-208546717	chr2	+	208546480	208546714	True	NM_001142300,NM_001127395	chr2,chr2	+,-	CCNYL1,METTL21A	29549,-56507
chr11:748748-750010	chr11	+	748907	749952	True	NM_006755,NM_182612	chr11,chr11	+,-	TALDO1,PDDC1	-1527,27585
chr19:6459191-6459403	chr19	+	6459291	6459419	True	NM_139161,NM_174881,NM_024103	chr19,chr19,chr19	+,+,-	CRB3,CRB3,SLC25A23	4840,4840,412
chr12:6663895-6664107	chr12	+	6663899	6664096	True	NM_001039670,NM_001193457,NM_080730,NR_036467,NM_002046	chr12,chr12,chr12,chr12,chr12	-,-,-,-,+	IFFO1,IFFO1,IFFO1,IFFO1,GAPDH	1204,1204,1204,1204,-20299
chr18:2576036-2577762	chr18	+	2576381	2577793	True	NM_006101,NM_022840	chr18,chr18	+,-	NDC80,METTL4	-4938,-4892
chr11:70928165-70929055	chr11	+	70928581	70928863	True	NM_018161,NM_012309	chr11,chr11	+,-	NADSYN1,SHANK2	235353,7004
chr22:45404253-45404528	chr22	+	45404411	45404521	True	NM_007172,NM_138415,NM_001135862	chr22,chr22,chr22	+,-,-	NUP50,PHF21B,PHF21B	155204,1110,1338
chr19:10229766-10230164	chr19	+	10229818	10230110	True	NM_002566,NM_003755,NR_003688	chr19,chr19,chr19	+,-,+	P2RY11,EIF3G,SNORD105B	-7672,539,-9444
chr18:29304816-29305965	chr18	+	29304836	29305972	True	NM_001034172,NM_000371	chr18,chr18	-,+	MCART2,TTR	34929,-133158
chr22:17638445-17638930	chr22	+	17638459	17638876	True	NM_017829,NM_033070,NR_024482,NR_024483	chr22,chr22,chr22,chr22	-,-,+,+	CECR5,CECR5,CECR4,CECR4	7356,1348,1402,1402
chr9:132598318-132599983	chr9	+	132598529	132600015	True	NM_006676,NM_001110303,NM_016520,NM_001008563	chr9,chr9,chr9,chr9	+,+,-,+	USP20,USP20,C9orf78,USP20	-891,-891,-957,-830
chr17:29156557-29157400	chr17	+	29156762	29156840	True	NM_015986,NM_024857	chr17,chr17	-,+	CRLF3,ATAD5	-4984,2182
chr7:4718801-4719284	chr7	+	4719114	4719318	True	NM_020144,NM_001037165	chr7,chr7	-,+	PAPOLB,FOXK1	182357,2611
chr2:65283348-65283631	chr2	+	65283391	65283671	True	NM_004161,NM_015147	chr2,chr2	-,+	RAB1A,CEP68	73814,19
chr12:108081730-108083328	chr12	+	108081927	108082922	True	NM_012406,NM_007062	chr12,chr12	-,+	PRDM4,PWP1	72055,-2388
chr12:27865916-27866865	chr12	+	27865956	27866745	True	NM_021821,NM_001146221,NM_001190864	chr12,chr12,chr12	+,-,+	MRPS35,LOC100287284,MRPS35	-2306,57523,-2306
chr5:10636251-10637239	chr5	+	10636284	10637277	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-71900,124160
chr9:131683869-131684316	chr9	+	131683916	131684336	True	NM_174933,NM_001100877,NM_001100876,NM_014908	chr9,chr9,chr9,chr9	+,+,+,-	PHYHD1,PHYHD1,PHYHD1,DOLK	-793,225,-793,25726
chr4:178660682-178661201	chr4	+	178660770	178661238	True	NR_033655,NR_028342	chr4,chr4	-,+	AGA,LOC285501	-297113,-10919
chr20:35273191-35274787	chr20	+	35273217	35274824	True	NM_175077,NM_032214,NR_026562	chr20,chr20,chr20	-,-,+	SLA2,SLA2,C20orf24	-216,-216,-39131
chr1:230846074-230846417	chr1	+	230846087	230846359	True	NM_000029,NM_006615	chr1,chr1	-,+	AGT,CAPN9	4027,36770
chr10:127582105-127584065	chr10	+	127582119	127584100	True	NM_018180,NM_145235	chr10,chr10	-,+	DHX32,FANK1	-12235,1007
chr17:27347090-27347385	chr17	+	27347151	27347395	True	NM_178860,NM_016518	chr17,chr17	-,+	SEZ6,PIPOX	-14070,22522
chrX:75555347-75555745	chrX	+	75555352	75555793	True	NM_020932,NM_138703	chrX,chrX	+,-	MAGEE1,MAGEE2	92252,-550273
chr3:151091601-151091975	chr3	+	151091611	151092014	True	NM_022788,NR_031678	chr3,chr3	-,+	P2RY12,MIR548H2	10589,255305
chr19:46233195-46233442	chr19	+	46233248	46233447	True	NM_001080469,NM_017659	chr19,chr19	-,+	FBXO46,QPCTL	755,-37563
chr3:160940224-160940873	chr3	+	160940422	160940887	True	NM_015938,NM_033168	chr3,chr3	+,-	NMD3,B3GALNT1	-1383,-117262
chr1:38016986-38018462	chr1	+	38017027	38018457	True	NM_024700,NM_003462	chr1,chr1	-,+	SNIP1,DNALI1	1496,4062
chr17:5186121-5188054	chr17	+	5186240	5187747	True	NM_207103,NM_004703,NM_001083585	chr17,chr17,chr17	-,+,+	C17orf87,RABEP1,RABEP1	-48157,-741,-741
chr17:80654042-80655074	chr17	+	80654099	80654757	True	NM_006822,NM_024619	chr17,chr17	-,+	RAB40B,FN3KRP	1891,19824
chr4:3076913-3078827	chr4	+	3077181	3078415	True	NM_002111,NM_003703	chr4,chr4	+,-	HTT,NOP14	-824,-112063
chr9:130911553-130912753	chr9	+	130911612	130912771	True	NR_027812,NM_024112,NM_005564	chr9,chr9,chr9	-,+,+	PTGES2,C9orf16,LCN2	-20900,9767,7
chr13:44950833-44951600	chr13	+	44950996	44951636	True	NM_001010897,NM_006022	chr13,chr13	+,-	SERP2,TSC22D1	-3069,59393
chr8:101322805-101323666	chr8	+	101322909	101323616	True	NM_183419,NM_003114,NM_015435	chr8,chr8,chr8	-,+,-	RNF19A,SPAG1,RNF19A	-582,-152397,-7422
chr10:83635726-83636255	chr10	+	83635763	83636235	True	NM_001165973,NM_001165972,NM_138812,NM_001010848	chr10,chr10,chr10,chr10	+,+,-,+	NRG3,NRG3,DYDC1,NRG3	1207,-744,-1519263,-744
chr6:107780350-107780706	chr6	+	107780354	107780620	True	NM_018013,NM_020381	chr6,chr6	+,-	SOBP,PDSS2	30696,209
chr19:50872240-50872454	chr19	+	50872285	50872464	True	NM_007121,NM_004851	chr19,chr19	+,-	NR1H2,NAPSA	7220,-3354
chr15:29560969-29561201	chr15	+	29561035	29561249	True	NM_138704,NM_005503	chr15,chr15	-,+	NDNL2,APBA2	818,-347246
chr9:94703572-94704163	chr9	+	94703591	94704029	True	NR_015444,NM_004560	chr9,chr9	+,-	LOC100128076,ROR2	191086,8465
chr22:42084868-42085081	chr22	+	42084973	42085044	True	NM_001003796,NM_001142964,NM_005008	chr22,chr22,chr22	-,+,-	NHP2L1,C22orf46,NHP2L1	-60,1502,-6417
chr12:121411295-121412888	chr12	+	121411585	121411829	True	NR_024345,NM_000545	chr12,chr12	-,+	NCRNA00262,HNF1A	-1490,4719
chr1:27322353-27323144	chr1	+	27322461	27323193	True	NM_052943,NM_001013642	chr1,chr1	-,+	FAM46B,TRNP1	16190,-2320
chr19:39521819-39522300	chr19	+	39521970	39522304	True	NM_178820,NM_001004318	chr19,chr19	-,+	FBXO27,PAPL	944,52640
chr1:193085945-193086187	chr1	+	193086040	193086130	True	NM_024529,NM_016066	chr1,chr1	+,-	CDC73,GLRX2	4957,-10796
chr6:41910893-41912318	chr6	+	41911175	41912073	True	NM_001760,NM_004053,NM_001136125	chr6,chr6,chr6	-,+,-	CCND3,BYSL,CCND3	-1623,-22269,-1623
chr2:204101684-204102855	chr2	+	204102185	204102793	True	NM_213589,NM_177538	chr2,chr2	-,+	RAPH1,CYP20A1	297317,370
chr3:196467915-196469505	chr3	+	196467915	196468939	True	NM_032898,NM_002577	chr3,chr3	-,+	C3orf34,PAK2	-28792,-1238
chr19:49864410-49864824	chr19	+	49864609	49864727	True	NM_014419,NM_003598,NM_001197302,NM_001197301	chr19,chr19,chr19,chr19	+,-,+,+	DKKL1,TEAD2,DKKL1,DKKL1	2314,1037,2259,2314
chr1:13676071-13676560	chr1	+	13676126	13676464	True	NM_001099854,NM_001010890	chr1,chr1	-,+	PRAMEF14,PRAMEF9	-2615,-34205
chr1:13676071-13676560	chr1	+	13455290	13455628	False	NM_001099854,NM_001024661,NM_001010890	chr1,chr1,chr1	-,-,+	PRAMEF14,PRAMEF13,PRAMEF9	-2634,-2634,-34166
chr8:146051492-146051696	chr8	+	146051561	146051627	True	NM_001081004,NM_003416	chr8,chr8	-,+	COMMD5,ZNF7	26874,1275
chr11:71246619-71247920	chr11	+	71246978	71247658	True	NM_021046,NM_001012503,NM_001005405	chr11,chr11,chr11	+,+,-	KRTAP5-8,KRTAP5-7,KRTAP5-11	1412,-8717,46316
chr20:39768175-39769027	chr20	+	39768345	39768937	True	NM_002660,NM_182811,NM_015035	chr20,chr20,chr20	+,+,-	PLCG1,PLCG1,ZHX3	-2235,-2235,159852
chrY:1352839-1353648	chrY	+	1352877	1353081	True	NM_022148,NR_037461,NM_172247,NM_001161530	chrY,chrY,chrY,chrY	-,+,+,+	CRLF2,MIR3690,CSF2RA,CSF2RA	-71347,9729,-1357,-1357
chrY:1352839-1353648	chrX	+	1402877	1403081	False	NM_022148,NR_037461,NM_172247,NM_001161530	chrX,chrX,chrX,chrX	-,+,+,+	CRLF2,MIR3690,CSF2RA,CSF2RA	-71347,9729,-1357,-1357
chr1:224049348-224050122	chr1	+	224049517	224049978	True	NM_005426,NM_001748	chr1,chr1	-,+	TP53BP2,CAPN2	-15843,-149461
chr6:89642327-89643241	chr6	+	89642431	89643137	True	NM_006813,NM_003800	chr6,chr6	+,-	PNRC1,RNGTT	147291,30261
chr22:23868906-23869412	chr22	+	23869011	23869409	True	NM_153615,NM_020070	chr22,chr22	+,-	RGL4,IGLL1	163638,53136
chr6:44225445-44225821	chr6	+	44225458	44225864	True	NM_004556,NM_007355,NM_178148	chr6,chr6,chr6	-,+,-	NFKBIE,HSP90AB1,SLC35B2	7711,-10660,-175
chr10:104219245-104220941	chr10	+	104219357	104220933	True	NM_024789,NM_024886	chr10,chr10	+,-	TMEM180,C10orf95	236,-8057
chr14:93796369-93797731	chr14	+	93796433	93797708	True	NM_020818,NM_018167,NM_001002860	chr14,chr14,chr14	+,-,-	KIAA1409,BTBD7,BTBD7	1856,1728,1728
chr1:157663833-157665391	chr1	+	157663954	157665126	True	NM_018240,NM_052939	chr1,chr1	+,-	KIRREL,FCRL3	297936,5571
chr6:75952023-75953080	chr6	+	75952597	75953088	True	NR_029466,NM_001100409,NM_001865	chr6,chr6,chr6	-,+,-	COX7A2,SENP6,COX7A2	606,358533,606
chr2:201753339-201753895	chr2	+	201753538	201753940	True	NM_001142356,NM_032472,NM_001142355,NM_001136039,NM_130906,NM_021824	chr2,chr2,chr2,chr2,chr2,chr2	+,-,+,+,-,+	NIF3L1,PPIL3,NIF3L1,NIF3L1,PPIL3,NIF3L1	2700,-41,109,109,-41,167
chr6:160226293-160227018	chr6	+	160226342	160227058	True	NM_173516,NM_030752	chr6,chr6	+,-	PNLDC1,TCP1	-5092,-15607
chr20:31775978-31776418	chr20	+	31775985	31776467	True	NM_080675,NR_026760	chr20,chr20	-,+	SUN5,BASE	-183746,4943
chr1:40726026-40726543	chr1	+	40726039	40726579	True	NM_005857,NM_001852	chr1,chr1	+,-	ZMPSTE24,COL9A2	-2359,56414
chr22:50988449-50989005	chr22	+	50988509	50988931	True	NM_001123225,NM_138433	chr22,chr22	-,+	C22orf41,KLHDC7B	12447,-2098
chr9:135458541-135459171	chr9	+	135458608	135459218	True	NM_022779,NM_020064	chr9,chr9	-,+	DDX31,BARHL1	86620,-666
chr22:38712010-38712254	chr22	+	38712018	38712226	True	NM_152221,NM_001161573,NM_001894	chr22,chr22,chr22	-,+,-	CSNK1E,MAFF,CSNK1E	1237,-113042,1913
chr1:212858373-212860126	chr1	+	212858530	212859886	True	NM_153606,NM_018664	chr1,chr1	+,-	FAM71A,BATF3	-60792,13491
chrX:138719996-138720972	chrX	+	138719995	138720993	True	NM_001171879,NM_001171878,NM_005369,NM_000133,NM_001171877	chrX,chrX,chrX,chrX,chrX	-,-,-,+,-	MCF2,MCF2,MCF2,F9,MCF2	4057,4057,4057,-107151,4057
chr12:50017589-50018190	chr12	+	50017594	50018124	True	NM_012272,NM_001031698,NM_032130	chr12,chr12,chr12	+,+,-	PRPF40B,PRPF40B,FAM186B	-242,6202,-18161
chr8:145757911-145758484	chr8	+	145757914	145758422	True	NM_001001795,NM_001024678,NM_014665	chr8,chr8,chr8	-,-,+	C8orf82,LRRC24,LRRC14	-3456,-5498,-14602
chr7:73153298-73153571	chr7	+	73153427	73153501	True	NM_148912,NM_148913,NR_026910,NR_026912,NR_026690,NM_001145364	chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,+,-	ABHD11,ABHD11,ABHD11,ABHD11,WBSCR26,ABHD11	-243,-243,-243,-237,-4079,-243
chr9:98909103-98909487	chr9	+	98909119	98909499	True	NR_033838,NR_024129	chr9,chr9	+,-	LOC158435,NCRNA00092	-81049,-125082
chr2:73458540-73459319	chr2	+	73458944	73459166	True	NM_001009570,NM_006429,NM_001166284,NM_001166285,NR_029403,NR_029402,NM_032319	chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,+,+,-	CCT7,CCT7,CCT7,CCT7,CCT7,CCT7,C2orf7	2197,2197,2197,2197,2197,2197,1240
chr17:34988785-34989899	chr17	+	34989002	34989933	True	NM_024864,NM_001033580	chr17,chr17	+,-	MRM1,MYO19	-31028,-97697
chrX:135579943-135581730	chrX	+	135579951	135581780	True	NM_001163280,NM_001727,NM_014500,NM_001173516	chrX,chrX,chrX,chrX	+,+,+,-	HTATSF1,BRS3,HTATSF1,MAP7D3	-764,-9877,-331,-241310
chr11:119234538-119234788	chr11	+	119234774	119234836	True	NM_171997,NR_034160	chr11,chr11	-,+	USP2,LOC100499227	106,17651
chr13:100741629-100742915	chr13	+	100741825	100742783	True	NM_001127692,NM_001178004,NM_000282,NM_033132	chr13,chr13,chr13,chr13	+,+,+,-	PCCA,PCCA,PCCA,ZIC5	-608,-608,-608,-117647
chr20:44746779-44747212	chr20	+	44746941	44747015	True	NM_152854,NM_001250,NM_020967	chr20,chr20,chr20	+,+,-	CD40,CD40,NCOA5	-86,-86,-28361
chr14:76833142-76834454	chr14	+	76833207	76834162	True	NM_004452,NM_003239	chr14,chr14	+,-	ESRRB,TGFB3	3527,-385115
chr17:27180133-27181120	chr17	+	27180415	27180785	True	NR_029685,NR_029970,NM_005702	chr17,chr17,chr17	-,-,+	MIR144,MIR451,ERAL1	7901,7723,1257
chr14:81712974-81713737	chr14	+	81712987	81713671	True	NM_201595,NM_000369	chr14,chr14	-,+	GTF2A1,TSHR	-25412,-291169
chr3:135103379-135104282	chr3	+	135103492	135104286	True	NM_178554,NM_001190447	chr3,chr3	-,+	KY,PPP2R3A	-733628,580228
chr10:105126873-105127968	chr10	+	105127129	105127684	True	NM_006951,NM_032154	chr10,chr10	+,-	TAF5,PCGF6	39,-16238
chr1:231470908-231472231	chr1	+	231471302	231472176	True	NM_032018,NM_175876,NM_001010984	chr1,chr1,chr1	+,-,+	C1orf124,EXOC8,C1orf124	1505,1452,1505
chr9:128002944-128003496	chr9	+	128002951	128003485	True	NM_005347,NM_015635	chr9,chr9	-,+	HSPA5,GAPVD1	231,20625
chr16:89226107-89226476	chr16	+	89226146	89226516	True	NR_024347,NM_005187	chr16,chr16	+,-	C16orf81,CBFA2T3	-569,-182642
chr11:6452558-6453215	chr11	+	6452561	6453103	True	NM_000613,NM_001007593	chr11,chr11	-,+	HPX,SMPD1	9201,-40968
chr22:20865210-20867119	chr22	+	20865302	20866826	True	NM_001003891,NR_033825,NM_015889	chr22,chr22,chr22	+,-,+	MED15,KLHL22,MED15	-3469,-15132,-3469
chr17:45093603-45094263	chr17	+	45093624	45093700	True	NM_203400,NM_054022	chr17,chr17	-,+	RPRML,GOSR2	-37010,-93189
chr1:8086932-8087319	chr1	+	8086945	8087299	True	NM_007262,NM_018948	chr1,chr1	+,-	PARK7,ERRFI1	-65282,-552
chr19:36102580-36103595	chr19	+	36103027	36103573	True	NM_000704,NM_015302	chr19,chr19	-,+	ATP4A,HAUS5	-48467,72
chr14:91716589-91716872	chr14	+	91716722	91716872	True	NM_001177676,NR_003709,NM_003485	chr14,chr14,chr14	-,+,-	GPR68,SNORA11B,GPR68	-5870,-124005,3402
chr7:140103817-140104058	chr7	+	140103837	140104051	True	NM_001008749,NM_032295,NM_207113	chr7,chr7,chr7	+,-,-	RAB19,SLC37A3,SLC37A3	-45,-5526,-5526
chr8:16054228-16056081	chr8	+	16054314	16055897	True	NM_002445,NM_138716,NM_138715,NM_178234	chr8,chr8,chr8,chr8	-,-,-,+	MSR1,MSR1,MSR1,TUSC3	-4014,-4014,-4014,-656769
chr10:92618599-92619515	chr10	+	92618598	92619422	True	NM_000872,NM_019860,NM_006413,NM_019859	chr10,chr10,chr10,chr10	-,-,+,-	HTR7,HTR7,RPP30,HTR7	-927,-927,12286,-927
chr5:37838660-37839046	chr5	+	37838666	37839068	True	NM_152403,NM_000514,NM_001190469,NM_001190468,NM_199231	chr5,chr5,chr5,chr5,chr5	+,-,-,-,-	EGFLAM,GDNF,GDNF,GDNF,GDNF	419464,764,-2737,-2737,-3073
chr3:185431647-185433229	chr3	+	185432184	185433189	True	NM_001007225,NR_027317	chr3,chr3	-,+	IGF2BP2,C3orf65	109689,-1196
chr10:50598858-50599230	chr10	+	50598909	50599273	True	NM_001080520,NM_199459	chr10,chr10	-,+	DRGX,C10orf71	684,-91773
chr16:75250516-75251323	chr16	+	75250684	75251350	True	NM_001025200,NM_001906	chr16,chr16	-,+	CTRB2,CTRB1	-9612,1533
chr11:108425654-108425890	chr11	+	108425666	108425866	True	NM_015065,NM_004398	chr11,chr11	-,+	EXPH5,DDX10	38558,109949
chr10:30723465-30723674	chr10	+	30723466	30723720	True	NR_003524,NM_005204	chr10,chr10	-,+	LOC729668,MAP3K8	-60089,-651
chr5:53694668-53695480	chr5	+	53694800	53695394	True	NM_006308,NM_019087	chr5,chr5	+,-	HSPB3,ARL15	56036,-88397
chr12:62716214-62717082	chr12	+	62716245	62716922	True	NM_006313,NM_178539	chr12,chr12	+,-	USP15,FAM19A2	-62116,-129694
chr3:112693636-112695380	chr3	+	112693638	112695251	True	NM_138806,NM_138939,NM_170780,NM_138940,NM_014170	chr3,chr3,chr3,chr3,chr3	-,-,-,-,+	CD200R1,CD200R1,CD200R1,CD200R1,GTPBP8	79,79,79,79,14548
chr19:49371202-49371927	chr19	+	49371414	49371834	True	NM_014330,NM_020904,NM_001161354	chr19,chr19,chr19	+,-,-	PPP1R15A,PLEKHA4,PLEKHA4	3814,100,100
chr22:42827597-42828171	chr22	+	42827626	42828220	True	NR_027786,NM_145912	chr22,chr22	+,-	SERHL,NFAM1	68364,231
chr22:31091702-31092799	chr22	+	31091723	31092563	True	NM_152511,NM_030758	chr22,chr22	-,+	DUSP18,OSBP2	-27851,-981
chr15:91409903-91410924	chr15	+	91409950	91410784	True	NM_198527,NM_002569	chr15,chr15	-,+	HDDC3,FURIN	65040,1100
chr12:121121962-121122711	chr12	+	121122153	121122727	True	NM_014730,NM_198202	chr12,chr12	+,-	MLEC,POP5	2221,-102952
chr17:79650977-79651184	chr17	+	79650977	79651199	True	NM_001040025,NM_004712	chr17,chr17	-,+	ARL16,HGS	-23,-66
chrX:40944046-40944325	chrX	+	40944064	40944372	True	NM_001039591,NM_001039590,NR_027761	chrX,chrX,chrX	+,+,-	USP9X,USP9X,LOC100132831	515,515,-251615
chr4:144433220-144434358	chr4	+	144433425	144434358	True	NM_001168235,NM_003601	chr4,chr4	-,+	FREM3,SMARCA5	187520,257
chr22:45812940-45813527	chr22	+	45813089	45813579	True	NM_015653,NM_148674	chr22,chr22	+,-	RIBC2,SMC1B	-3566,-3589
chr7:123340785-123342403	chr7	+	123340797	123341826	True	NM_207163,NM_003941	chr7,chr7	+,-	LMOD2,WASL	-44993,47340
chr14:25101226-25101462	chr14	+	25101231	25101459	True	NM_015299,NM_004131	chr14,chr14	+,-	KHNYN,GZMB	-202141,2023
chr1:245316619-245317087	chr1	+	245316640	245316890	True	NM_018012,NM_031844	chr1,chr1	+,-	KIF26B,HNRNPU	1396,-288813
chr14:36988773-36989200	chr14	+	36988811	36989191	True	NM_003317,NM_006194,NM_001101341,NM_001079668	chr14,chr14,chr14,chr14	-,+,-,-	NKX2-1,PAX9,SFTA3,NKX2-1	64,137581,-5821,289
chr1:207195865-207196211	chr1	+	207195971	207196211	True	NM_023938,NM_001083924,NM_006212	chr1,chr1,chr1	-,-,+	C1orf116,C1orf116,PFKFB2	9940,9940,30408
chr14:50700856-50701246	chr14	+	50700876	50701077	True	NM_006939,NM_015684	chr14,chr14	-,+	SOS2,ATP5S	-2777,77969
chr6:118876513-118877229	chr6	+	118876627	118877248	True	NM_001042475,NM_002667	chr6,chr6	-,+	C6orf204,PLN	95822,-7246
chr10:3825960-3826897	chr10	+	3826038	3826520	True	NM_001160125,NM_001160124,NM_002627,NR_027653,NM_001300	chr10,chr10,chr10,chr10,chr10	-,-,+,-,-	KLF6,KLF6,PFKP,KLF6,KLF6	1003,1003,-716338,1003,1003
chr19:49339305-49339571	chr19	+	49339309	49339513	True	NM_014330,NM_016246	chr19,chr19	+,-	PPP1R15A,HSD17B14	36135,471
chr11:62381004-62381321	chr11	+	62381206	62381368	True	NM_153265,NM_012200,NM_000327	chr11,chr11,chr11	-,-,+	EML3,B3GAT3,ROM1	-969,8130,-1044
chr7:30633869-30634173	chr7	+	30633963	30634147	True	NM_001202482,NM_002047	chr7,chr7	-,+	CRHR2,GARS	88044,33
chr20:56726172-56726627	chr20	+	56726249	56726466	True	NM_178456,NR_003505	chr20,chr20	+,-	C20orf85,PPP4R1L	-317,158088
chr16:16041269-16041765	chr16	+	16041463	16041761	True	NM_019900,NM_144600,NM_004996,NM_019862,NM_019898,NM_019899	chr16,chr16,chr16,chr16,chr16,chr16	+,-,+,+,+,+	ABCC1,FOPNL,ABCC1,ABCC1,ABCC1,ABCC1	1672,-59016,1672,1672,1672,1672
chr2:190649157-190649395	chr2	+	190649247	190649429	True	NM_001128143,NM_016467,NM_001128144,NM_001128150,NM_000534	chr2,chr2,chr2,chr2,chr2	+,-,+,-,+	PMS1,ORMDL1,PMS1,ORMDL1,PMS1	-487,-150,-487,-150,-487
chr19:10827321-10827781	chr19	+	10827478	10827598	True	NM_001005361,NM_001005360,NM_001005362,NM_004945,NR_030368,NR_024333,NM_001190716	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,-,+	DNM2,DNM2,DNM2,DNM2,MIR638,LOC147727,DNM2	1130,1130,1130,1130,1481,-62930,1130
chr2:241622593-241623386	chr2	+	241622955	241623299	True	NM_198998,NM_001102467	chr2,chr2	+,-	AQP12A,AQP12B	7962,-638
chr2:241622593-241623386	chr2	-	241630284	241630346	False	NM_198998,NM_001102467	chr2,chr2	+,-	AQP12A,AQP12B	915,-7967
chr19:36307066-36308010	chr19	+	36307395	36307845	True	NM_021232,NM_032123	chr19,chr19	-,+	PRODH2,KIRREL2	-3194,39964
chr1:249200502-249200747	chr1	+	249200580	249200652	True	NM_001193328,NM_001017434	chr1,chr1	-,+	ZNF692,PGBD2	-47265,-189
chr1:17533272-17533681	chr1	+	17533466	17533674	True	NM_007365,NM_013358	chr1,chr1	-,+	PADI2,PADI1	-87518,-1896
chr11:65714652-65716164	chr11	+	65714713	65715985	True	NM_031450,NM_152762	chr11,chr11	-,+	C11orf68,TSGA10IP	-28182,-1649
chr8:136468768-136469019	chr8	+	136468844	136469068	True	NR_029599,NM_006558	chr8,chr8	-,+	MIR30D,KHDRBS3	-651656,647
chr18:9715736-9716610	chr18	+	9715997	9716526	True	NM_006868,NM_005134	chr18,chr18	+,-	RAB31,PPP4R1	-7820,-101397
chr15:34679917-34681637	chr15	+	34679926	34681265	True	NM_175741,NR_036050,NM_181077,NR_036261	chr15,chr15,chr15,chr15	+,-,-,-	C15orf55,MIR1233-1,GOLGA8A,MIR1233-2	-41911,-5575,786,-5575
chr15:34679917-34681637	chr15	+	34826147	34827486	False	NR_036050,NM_175741,NM_001023567,NR_036261	chr15,chr15,chr15,chr15	-,+,-,-	MIR1233-1,C15orf55,GOLGA8B,MIR1233-2	-5575,-188132,786,-5575
chr2:149894469-149894990	chr2	+	149894470	149894913	True	NM_015702,NM_177964	chr2,chr2	-,+	MMADHC,LYPD6B	549467,67
chr17:39219857-39221767	chr17	+	39219964	39221604	True	NM_033061,NM_001165252,NM_033184,NM_033032	chr17,chr17,chr17,chr17	+,-,-,-	KRTAP4-7,LOC730755,KRTAP2-4,KRTAP2-2	18854,-3620,577,-8501
chr11:69200791-69201040	chr11	+	69200798	69201024	True	NM_153451,NM_138768	chr11,chr11	-,+	ORAOV1,MYEOV	289191,-139227
chr21:35557801-35558108	chr21	+	35557804	35558156	True	NM_001697,NR_027267,NR_027266	chr21,chr21,chr21	-,+,+	ATP5O,C21orf82,C21orf82	-269646,-4877,-4877
chr10:75670313-75670651	chr10	+	75670407	75670473	True	NM_002658,NM_001001791,NM_001145031	chr10,chr10,chr10	+,-,+	PLAU,C10orf55,PLAU	388,12112,388
chr10:118379776-118380394	chr10	+	118379957	118380388	True	NM_005396,NM_144661	chr10,chr10	+,-	PNLIPRP2,C10orf82	76,49143
chr19:18385722-18385941	chr19	+	18385814	18385890	True	NM_025249,NR_036155,NM_005354,NM_001145304,NM_001145305	chr19,chr19,chr19,chr19,chr19	-,+,-,-,-	KIAA1683,MIR3188,JUND,KIAA1683,KIAA1683	-495,6996,6592,-495,-495
chr14:94256163-94256821	chr14	+	94256197	94256867	True	NM_138344,NM_178013	chr14,chr14	+,-	FAM181A,PRIMA1	128390,-1431
chr17:79916311-79916754	chr17	+	79916408	79916590	True	NM_178493,NM_024083	chr17,chr17	-,+	NOTUM,ASPSCR1	2517,18835
chr15:77925314-77925523	chr15	+	77925414	77925512	True	NM_018200,NM_032808	chr15,chr15	+,-	HMG20A,LINGO1	-212222,-705
chr7:150034609-150036110	chr7	+	150034806	150036026	True	NM_138434,NM_002889	chr7,chr7	+,-	C7orf29,RARRES2	-7919,2787
chr13:46188526-46189862	chr13	+	46188552	46189593	True	NM_182542,NM_152719	chr13,chr13	-,+	FAM194B,SPERT	332,86852
chr21:47265019-47265815	chr21	+	47265038	47265794	True	NM_194255,NM_020528,NM_001130141	chr21,chr21,chr21	-,+,+	SLC19A1,PCBP3,PCBP3	-302653,4080,4080
chr6:25965129-25966071	chr6	+	25965326	25965682	True	NM_006355,NM_005835	chr6,chr6	+,-	TRIM38,SLC17A2	-2311,-34380
chr12:70094642-70096079	chr12	+	70095179	70096053	True	NM_032735,NM_022456	chr12,chr12	-,+	BEST3,RAB3IP	-1983,36577
chr19:30859691-30860438	chr19	+	30859720	30860426	True	NM_014717,NM_031448	chr19,chr19	+,-	ZNF536,C19orf12	2901,-653268
chr1:95579136-95580187	chr1	+	95579299	95579968	True	NM_001199691,NM_152487,NM_144988	chr1,chr1,chr1	+,+,-	TMEM56-RWDD3,TMEM56,ALG14	3510,2925,-40792
chr19:40476564-40476819	chr19	+	40476634	40476802	True	NM_153001,NM_003890,NM_006503	chr19,chr19,chr19	+,-,+	PSMC4,FCGBP,PSMC4	270,-36101,270
chr9:135818982-135819700	chr9	+	135819035	135819449	True	NM_001135031,NM_001162426,NM_001162427,NM_000368	chr9,chr9,chr9,chr9	+,-,-,-	GFI1B,TSC1,TSC1,TSC1	34648,621,621,621
chr7:101929034-101929451	chr7	+	101929125	101929187	True	NR_036245,NM_020979,NM_001146210	chr7,chr7,chr7	+,+,-	MIR4285,SH2B2,SPDYE6	7181,-771,67752
chr4:142594784-142595593	chr4	+	142595064	142595422	True	NM_020724,NR_037840	chr4,chr4	-,+	RNF150,IL15	-540448,-37379
chr2:114389155-114390140	chr22	-	51217242	51217514	False	NM_001003789,NM_001130919,NM_001130920,NM_001130921,NM_001130922,NM_001130923	chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,-,-	RABL2B,RABL2B,RABL2B,RABL2B,RABL2B,RABL2B	4623,4623,4623,4623,4623,4623
chr2:114389155-114390140	chr2	+	114389176	114389983	True	NM_007082,NR_000029,NM_013412,NR_024529,NR_024528,NR_024530,NR_024531	chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,-,+,-,-,-,-	RABL2A,RPL23AP7,RABL2A,RPL23AP7,RPL23AP7,RPL23AP7,RPL23AP7	-4410,-4461,-4410,-4461,-4461,-4461,-4461
chr1:155993472-155993861	chr1	+	155993505	155993695	True	NM_014017,NM_003145	chr1,chr1	+,-	LAMTOR2,SSR2	30821,-2747
chr12:91501349-91501783	chr12	+	91501377	91501486	True	NR_027932,NM_002345	chr12,chr12	+,-	CLLU1,LUM	1313820,4117
chr19:48057090-48057882	chr19	+	48057092	48057846	True	NM_015711,NM_001101419	chr19,chr19	+,-	GLTSCR1,ZNF541	53606,1318
chr20:61868332-61868662	chr20	+	61868340	61868494	True	NM_022161,NM_139317,NR_036163,NM_152864	chr20,chr20,chr20,chr20	+,+,+,-	BIRC7,BIRC7,MIR3196,NKAIN4	-1115,-1115,1636,17448
chrX:32989169-32990385	chrX	+	32989432	32990224	True	NM_004007,NM_152631	chrX,chrX	-,+	DMD,FAM47B	48152,1970688
chr15:31108261-31109429	chr15	+	31108393	31109003	True	NM_017762,NM_001146095	chr15,chr15	-,+	MTMR10,FAN1	174854,87051
chr21:30673731-30675088	chr21	+	30673937	30675114	True	NR_027655,NM_206866,NM_006585,NM_001186	chr21,chr21,chr21,chr21	+,+,-,+	BACH1,BACH1,CCT8,BACH1	2445,-2251,-227927,-2768
chr6:155763320-155763985	chr6	+	155763564	155764000	True	NM_015718,NM_001001346	chr6,chr6	-,+	NOX3,CLDN20	13087,-178471
chr1:145574997-145575250	chr1	+	145575051	145575147	True	NM_006099,NM_001012758	chr1,chr1	+,-	PIAS3,NUDT17	840,14338
chr5:25910542-25910830	chr5	+	25910558	25910878	True	NR_037896,NM_020227	chr5,chr5	-,+	LOC340107,PRDM9	-1069866,-2402885
chr5:25910542-25910830	chrX	+	64956751	64957071	False	NM_002444,NR_033742	chrX,chrX	+,-	MSN,FKSG43	-69543,-184450
chr2:74685240-74685583	chr2	+	74685245	74685545	True	NM_001146158,NM_006302,NM_031288,NM_012477,NR_037849	chr2,chr2,chr2,chr2,chr2	-,-,+,+,+	MOGS,MOGS,INO80B,WBP1,INO80B-WBP1	7042,7042,-3146,-19,-3146
chrX:3265300-3265592	chrX	+	3265321	3265641	True	NM_004042,NM_015419	chrX,chrX	+,-	ARSF,MXRA5	-280532,-637
chr4:6199693-6199943	chr4	+	6199707	6199983	True	NM_001099433,NM_144720,NR_037863	chr4,chr4,chr4	-,-,+	JAKMIP1,JAKMIP1,LOC285484	2385,2385,2476
chr12:116716582-116717513	chr12	+	116716898	116717391	True	NR_027345,NM_015335	chr12,chr12	+,-	NCRNA00173,MED13L	253835,-1907
chr19:45407653-45408432	chr19	+	45407773	45408305	True	NM_145288,NM_001645,NM_000041	chr19,chr19,chr19	-,+,+	ZNF296,APOC1,APOE	171433,9615,733
chr5:10301190-10301872	chr5	+	10301266	10301608	True	NM_012073,NM_138809	chr5,chr5	+,-	CCT5,CMBL	-51042,6610
chr2:166810485-166810699	chr2	+	166810549	166810745	True	NM_024969,NM_024753	chr2,chr2	+,-	CSRNP3,TTC21B	-381754,-201
chr10:76996541-76997412	chr10	+	76996926	76997426	True	NM_144589,NR_033675	chr10,chr10	-,+	COMTD1,VDAC2	-1156,-26677
chr4:2794229-2794554	chr4	+	2794270	2794590	True	NM_001122681,NM_024309	chr4,chr4	+,-	SH3BP2,TNIP2	159,-36167
chr6:160220959-160221259	chr6	+	160221004	160221176	True	NM_173516,NM_014161,NM_030752	chr6,chr6,chr6	+,+,-	PNLDC1,MRPL18,TCP1	124,-9563,-10269
chr20:1098077-1098785	chr20	+	1098298	1098815	True	NM_018354,NM_006814,NM_178578	chr20,chr20,chr20	-,+,+	C20orf46,PSMF1,PSMF1	66352,424,-4443
chr22:36927685-36928171	chr22	+	36927856	36928071	True	NM_003753,NM_145343	chr22,chr22	-,+	EIF3D,APOL1	-2579,-278803
chr3:17781872-17782531	chr3	+	17781874	17782426	True	NM_014744,NM_001134380,NR_037465	chr3,chr3,chr3	-,-,+	TBC1D5,TBC1D5,MIR3714	24,1865,-807248
chr2:70531004-70531428	chr2	+	70531006	70531296	True	NM_032822,NM_016297	chr2,chr2	-,+	FAM136A,PCYOX1	-1786,-45831
chr12:6310541-6311627	chr12	+	6310753	6311659	True	NM_001769,NM_000552	chr12,chr12	+,-	CD9,VWF	-1322,-76917
chr5:133563911-133565341	chr5	+	133564064	133565029	True	NR_037434,NM_002715	chr5,chr5	+,-	MIR3661,PPP2CA	-2675,-2114
chr16:2868700-2868920	chr16	+	2868750	2868812	True	NR_026864,NM_144956,NM_006799,NM_144957	chr16,chr16,chr16,chr16	-,+,+,+	PRSS30P,PRSS21,PRSS21,PRSS21	23990,-1637,-1637,-1637
chr11:1970598-1971100	chr11	+	1970644	1970860	True	NR_024471,NM_021134	chr11,chr11	-,+	LOC100133545,MRPL23	40340,-2193
chr17:30420156-30422155	chr17	+	30420749	30422036	True	NM_001033566,NR_002222	chr17,chr17	+,-	RHOT1,ARGFXP2	47436,56614
chr17:30420156-30422155	chr17	-	30352414	30352464	False	NM_018428,NM_052888	chr17,chr17	-,+	UTP6,LRRC37B	-123685,-4310
chr3:61549446-61550202	chr3	+	61549629	61550125	True	NM_002841,NM_002012	chr3,chr3	+,-	PTPRG,FHIT	-2437,-312496
chr9:127534208-127534416	chr9	+	127534250	127534462	True	NM_001489,NM_033334,NM_182487	chr9,chr9,chr9	-,-,+	NR6A1,NR6A1,OLFML2A	-674,-674,4974
chr3:18484909-18485140	chr3	+	18484918	18485054	True	NM_001131010,NM_144633	chr3,chr3	-,+	SATB1,KCNH8	-4653,704962
chr4:4250267-4251372	chr4	+	4250455	4251010	True	NM_032927,NM_145291	chr4,chr4	-,+	TMEM128,ZBTB49	-521,40913
chr13:44946902-44947532	chr13	+	44946952	44947540	True	NM_001010897,NM_006022	chr13,chr13	+,-	SERP2,TSC22D1	437,63489
chr7:73149251-73149772	chr7	+	73149414	73149818	True	NM_148912,NM_148913,NR_026910,NR_026912,NR_026690,NM_001145364	chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,+,-	ABHD11,ABHD11,ABHD11,ABHD11,WBSCR26,ABHD11	3416,3416,3416,3422,-66,3416
chrX:153608224-153608659	chrX	+	153608270	153608644	True	NM_001110556,NM_000117,NM_001456	chrX,chrX,chrX	-,+,-	FLNA,EMD,FLNA	-5264,-724,-5264
chr4:214654-215069	chr4	+	214768	214949	True	NM_001137608,NR_027481	chr4,chr4	-,+	ZNF732,ZNF876P	75052,-8443
chr7:66332162-66333979	chr7	+	66332208	66333838	True	NR_003934,NM_017994	chr7,chr7	-,+	LOC729156,C7orf42	-22395,52364
chr7:27531909-27532245	chr7	+	27531947	27532291	True	NM_152740,NM_001079864	chr7,chr7	-,+	HIBADH,TAX1BP1	170379,247446
chr6:90016752-90017962	chr6	+	90016821	90017991	True	NM_014942,NM_002043	chr6,chr6	+,-	ANKRD6,GABRR2	124905,7026
chr11:85339705-85340071	chr11	+	85339708	85340022	True	NR_036465,NM_001193537,NM_001193538,NM_001142699,NM_018480	chr11,chr11,chr11,chr11,chr11	+,+,+,-,+	TMEM126B,TMEM126B,TMEM126B,DLG2,TMEM126B	-137,-137,-137,-1394,-137
chr20:23030470-23030694	chr20	+	23030633	23030725	True	NM_001052,NM_000361	chr20,chr20	+,-	SSTR4,THBD	-14629,-332
chr16:88517514-88518780	chr16	+	88517678	88518607	True	NM_000101,NM_153813	chr16,chr16	-,+	CYBA,ZFPM1	198901,1406
chr11:64569626-64570215	chr11	+	64569651	64570067	True	NM_004579,NM_006244,NM_130799,NM_000244,NM_130804,NM_130803,NM_130802,NM_130801,NM_130800	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,+,-,-,-,-,-,-,-	MAP4K2,PPP2R5B,MEN1,MEN1,MEN1,MEN1,MEN1,MEN1,MEN1	696,122075,8171,8171,8749,8749,8196,8018,8018
chr3:168541507-168541925	chr3	+	168541522	168541968	True	NR_030294,NM_005241	chr3,chr3	+,-	MIR551B,MECOM	-271938,322177
chr20:32716215-32718212	chr20	+	32716368	32718041	True	NM_001672,NM_003908	chr20,chr20	+,-	ASIP,EIF2S2	130129,-16283
chr19:12475143-12475679	chr19	+	12475362	12475696	True	NM_003437,NM_030824	chr19,chr19	+,-	ZNF136,ZNF442	-201541,829
chr6:29942067-29942975	chr6_qbl_hap6	+	1235074	1235730	False	NR_001317,NR_028032	chr6_qbl_hap6,chr6_qbl_hap6	-,+	HCG4P6,HCG9	-46999,-41
chr6:29942067-29942975	chr6	+	29942282	29942938	True	NR_001317,NR_028032	chr6,chr6	-,+	HCG4P6,HCG9	-48854,-7
chr6:29942067-29942975	chr6_cox_hap2	+	1454551	1454641	False	NR_001317,NR_028032	chr6_cox_hap2,chr6_cox_hap2	-,+	HCG4P6,HCG9	-47400,-7
chr6:29942067-29942975	chr6_mcf_hap5	+	1324709	1324799	False	NR_026751,NR_028032	chr6_mcf_hap5,chr6_mcf_hap5	-,+	ZNRD1-AS1,HCG9	86113,-7
chr6:29942067-29942975	chr6_dbb_hap3	+	1236182	1236272	False	NR_001317,NR_028032	chr6_dbb_hap3,chr6_dbb_hap3	-,+	HCG4P6,HCG9	-47748,-7
chr6:35185519-35185921	chr6	+	35185635	35185943	True	NM_152753,NM_018679	chr6,chr6	+,-	SCUBE3,TCP11	-3496,-76448
chr18:56286150-56287377	chr18	+	56286206	56287187	True	NM_006785,NM_052947	chr18,chr18	+,-	MALT1,ALPK2	51430,9058
chr4:47033451-47034009	chr4	+	47033478	47034040	True	NM_000809,NM_000812	chr4,chr4	-,+	GABRA4,GABRB1	-37054,-241
chr15:45812770-45814377	chr15	+	45812856	45814335	True	NR_022014,NM_013309	chr15,chr15	+,-	HMGN2P46,SLC30A4	-9573,718
chr7:63960089-63961391	chr7	+	63960238	63961353	True	NM_178558,NR_029404	chr7,chr7	-,+	ZNF680,LOC649395	62202,-66218
chr14:96130292-96131168	chr14	+	96130511	96131168	True	NM_001098725,NR_028288	chr14,chr14	-,+	TCL1A,TCL6	49416,-13047
chr3:110790477-110790727	chr3	+	110790575	110790755	True	NM_024508,NM_015480	chr3,chr3	-,+	ZBED2,PVRL3	523461,109
chr17:12689883-12690419	chr17	+	12689895	12690243	True	NM_014859,NM_001165962	chr17,chr17	+,-	ARHGAP44,ELAC2	2585,231192
chr16:70557455-70557856	chr16	+	70557663	70557837	True	NM_012426,NM_015386,NR_003696,NR_037420,NM_001195139	chr16,chr16,chr16,chr16,chr16	+,-,+,+,-	SF3B3,COG4,SNORD111B,MIR3647,COG4	-23,-206,5567,5564,-206
chr19:2430706-2431004	chr19	+	2430770	2430932	True	NM_182973,NM_012458	chr19,chr19	+,-	TMPRSS9,TIMM13	-41037,-2895
chr12:10318529-10319470	chr12	+	10319251	10319471	True	NM_153022,NM_001172632,NM_001172633,NM_002543	chr12,chr12,chr12,chr12	+,-,-,-	C12orf59,OLR1,OLR1,OLR1	12085,5369,5369,5369
chr4:7069263-7069578	chr4	+	7069284	7069348	True	NM_152293,NM_025196	chr4,chr4	+,-	TADA2B,GRPEL1	-24179,502
chr2:210650859-210652745	chr2	+	210650910	210652375	True	NM_152519,NM_182587	chr2,chr2	-,+	C2orf67,UNC80	383726,-14244
chr19:3496829-3498562	chr19	+	3496962	3498062	True	NM_031304,NM_016263,NM_001145165	chr19,chr19,chr19	-,+,-	DOHH,FZR1,DOHH	2609,8232,2926
chr20:55840498-55840882	chr20	+	55840640	55840814	True	NM_012444,NM_001719	chr20,chr20	+,-	SPO11,BMP7	64016,943
chr1:161136143-161136393	chr1	+	161136149	161136313	True	NM_000309,NM_001199873,NM_012475,NM_001014443,NM_001122764	chr1,chr1,chr1,chr1,chr1	+,-,+,+,+	PPOX,B4GALT3,USP21,USP21,PPOX	-19,11495,-6946,-6946,-19
chr18:33642254-33644173	chr18	+	33642329	33643855	True	NM_018170,NM_018255	chr18,chr18	-,+	RPRD1A,ELP2	3568,66031
chr10:101688005-101688755	chr10	+	101688064	101688557	True	NR_024130,NM_015221	chr10,chr10	+,-	DNMBP-AS1,DNMBP	-1149,81176
chr2:55459789-55460015	chr2	+	55459815	55460038	True	NM_152385,NM_002954,NM_001135592,NM_001135598,NM_001177413	chr2,chr2,chr2,chr2,chr2	-,+,+,-,+	C2orf63,RPS27A,RPS27A,C2orf63,RPS27A	-366,-325,-827,-116,-52
chr5:5052409-5052676	chr5	+	5052413	5052715	True	NR_026994,NR_028351	chr5,chr5	+,-	LOC340094,FLJ33360	-17992,1284740
chr21:35286380-35287734	chr21	+	35286663	35287704	True	NM_032476,NM_001697	chr21,chr21	+,-	MRPS6,ATP5O	158118,511
chr14:35187908-35188564	chr14	+	35188084	35188399	True	NR_002937,NM_021914,NM_138638,NR_028130,NR_028131,NR_028132	chr14,chr14,chr14,chr14,chr14,chr14	+,-,-,-,-,-	C14orf19,CFL2,CFL2,CFL2,CFL2,CFL2	220728,-5061,-4055,-4055,-4055,-4323
chr11:117744855-117745534	chr11	+	117744854	117745488	True	NM_001164837,NM_001204268,NM_022003,NM_001164832,NM_001164831,NM_001164836,NR_037907,NM_001558	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,-,-,-,+	FXYD6,FXYD6-FXYD2,FXYD6,FXYD6,FXYD6,FXYD6,FXYD6-FXYD2,IL10RA	2308,2308,2308,2308,2763,2308,2308,111617
chr16:30041941-30042328	chr16	+	30042311	30042373	True	NM_031478,NM_001109660,NM_001109659	chr16,chr16,chr16	-,+,+	FAM57B,C16orf92,C16orf92	-125,-7707,-7707
chr7:128308792-128309320	chr7	+	128308801	128309161	True	NM_001708,NM_001012454,NM_001128926	chr7,chr7,chr7	-,+,+	OPN1SW,FAM71F2,FAM71F2	106733,3184,3184
chr3:16976148-16977022	chr3	+	16976263	16977057	True	NM_015184,NM_001351,NR_037465	chr3,chr3,chr3	+,-,+	PLCL2,DAZL,MIR3714	-1732,-329257,-1626
chr15:72947782-72948588	chr15	+	72947905	72948572	True	NR_002780,NM_018652	chr15,chr15	-,+	HIGD2B,GOLGA6B	29975,-918
chr15:72947782-72948588	chr15	-	78218290	78218340	False	NM_001101404,NR_027024	chr15,chr15	+,-	SH2D7,LOC645752	166586,898
chr15:72947782-72948588	chr15	-	74373356	74374023	False	NM_001130136,NM_001038640	chr15,chr15	+,-	ISLR2,GOLGA6A	47691,918
chr15:72947782-72948588	chr15	+	75551766	75552433	False	NR_030360,NM_001164404	chr15,chr15	-,+	MIR631,GOLGA6C	93650,-918
chr15:72947782-72948588	chr15	+	75576043	75576710	False	NR_030360,NM_001145224	chr15,chr15	-,+	MIR631,GOLGA6D	69373,-912
chr15:44082361-44082821	chr15	+	44082620	44082696	True	NM_016400,NM_001199885,NM_001033517,NM_001018108,NR_037673,NR_037672,NM_001199878,NM_001199876,NM_001199875,NR_031695	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,-,+,+,+,+,+,+,-	C15orf63,C15orf63,SERINC4,SERF2,SERF2-C15ORF63,SERF2,SERF2,SERF2,SERF2,MIR1282	9922,9922,9609,1343,1477,1477,1878,1477,1477,3311
chr4:1897522-1897808	chr4	+	1897650	1897780	True	NM_007331,NM_012318,NM_133330,NM_133331,NM_133334,NM_133335	chr4,chr4,chr4,chr4,chr4,chr4	+,-,+,+,+,+	WHSC1,LETM1,WHSC1,WHSC1,WHSC1,WHSC1	-3192,-39676,-3192,-3192,4572,-3192
chr13:41826106-41827202	chr13	+	41826599	41827126	True	NM_001110798,NM_004294	chr13,chr13	+,-	NAA16,MTRF1	58214,10644
chr19:46087526-46087773	chr19	+	46087590	46087812	True	NM_003370,NM_001017989,NM_025136	chr19,chr19,chr19	+,-,-	VASP,OPA3,OPA3	-76953,360,360
chr19:18530948-18531295	chr19	+	18531104	18531334	True	NM_032627,NM_001170939,NM_001009998	chr19,chr19,chr19	+,-,+	SSBP4,ISYNA1,SSBP4	-1009,17637,-1009
chr12:48722062-48722988	chr12	+	48722112	48722859	True	NM_001172681,NM_181788	chr12,chr12	-,+	ZNF641,H1FNT	21872,-16
chr7:76760754-76762208	chr7	+	76761153	76761763	True	NM_020879,NM_006682	chr7,chr7	+,-	CCDC146,FGL2	-9272,67447
chr7:76760754-76762208	chr7	-	102379822	102380230	False	NM_032959,NR_026879,NM_001145269,NM_001145268	chr7,chr7,chr7,chr7	-,+,+,+	POLR2J2,FAM185A,FAM185A,FAM185A	-67640,9168,9168,9168
chr12:124119974-124120810	chr12	+	124120308	124120824	True	NM_001414,NM_001516	chr12,chr12	-,+	EIF2B1,GTF2H3	-1985,-1978
chr6:56908778-56910626	chr6	+	56909760	56910663	True	NM_020931,NM_183227	chr6,chr6	+,-	KIAA1586,RAB23	720,175649
chr2:27345545-27345855	chr2	+	27345620	27345880	True	NM_032604,NM_001166240,NM_006569,NM_001166239	chr2,chr2,chr2,chr2	+,-,-,-	ABHD1,CGREF1,CGREF1,CGREF1	776,-3625,-3625,-3847
chr6:155407723-155409310	chr6	+	155407913	155409046	True	NM_012454,NM_016020	chr6,chr6	+,-	TIAM2,TFB1M	2376,226631
chr12:26275312-26275567	chr12	+	26275314	26275504	True	NM_001164746,NM_030762	chr12,chr12	+,-	RASSF8,BHLHE41	-69874,2549
chr3:197675097-197676604	chr3	+	197675164	197676284	True	NM_001134435,NM_000996	chr3,chr3	-,+	IQCG,RPL35A	562,767
chr9:136855369-136855590	chr9	+	136855426	136855534	True	NM_003371,NR_015427,NM_001134398	chr9,chr9,chr9	-,+,-	VAV2,NCRNA00094,VAV2	1962,35026,1962
chr9:127536568-127536961	chr9	+	127536612	127537011	True	NM_001489,NM_033334,NM_182487	chr9,chr9,chr9	-,-,+	NR6A1,NR6A1,OLFML2A	-3036,-3036,2425
chr3:178866460-178866711	chr3	+	178866466	178866666	True	NM_152240,NM_006218	chr3,chr3	-,+	ZMAT3,PIK3CA	-76810,-206
chr1:29138160-29138517	chr1	+	29138159	29138280	True	NM_000911,NM_005644	chr1,chr1	+,-	OPRD1,TAF12	373,-168555
chr6:57181777-57182419	chr6	+	57181915	57182238	True	NM_016277,NM_000947	chr6,chr6	-,+	RAB23,PRIM2	-94837,183
chr1:20917080-20917688	chr1	+	20917098	20917560	True	NM_001785,NM_005216	chr1,chr1	+,-	CDA,DDOST	-1705,70527
chr7:75440937-75442102	chr7	+	75440961	75441987	True	NM_002991,NM_001040456	chr7,chr7	-,+	CCL24,RHBDD2	1096,66329
chr8:121135950-121136548	chr8	+	121135963	121136531	True	NM_024094,NM_021110	chr8,chr8	-,+	DSCC1,COL14A1	-267793,820
chr10:66585105-66585911	chr10	+	66585330	66585927	True	NR_001446,NM_032776	chr10,chr10	+,-	ANXA2P3,JMJD1C	-96,-1359608
chr19:16296836-16297168	chr19	+	16296851	16297076	True	NM_014077,NM_054113	chr19,chr19	+,-	FAM32A,CIB3	-667,-12565
chr4:166031779-166032293	chr4	+	166031868	166032228	True	NM_001100389,NM_152620	chr4,chr4	-,+	TMEM192,TRIM60	1856,-78769
chr1:113022050-113023510	chr1	+	113022207	113023436	True	NM_004185,NR_036210	chr1,chr1	+,-	WNT2B,MIR4256	-12230,-17752
chr7:12442956-12443380	chr7	+	12442958	12443350	True	NM_001112706,NM_001135924	chr7,chr7	+,-	SCIN,VWDE	166852,552
chrX:72298569-72299065	chrX	+	72298616	72298928	True	NM_001042506,NM_001012977	chrX,chrX	+,-	PABPC1L2B,PABPC1L2A	-75315,473
chrX:72298569-72299065	chrX	-	72223778	72224090	False	NR_026595,NM_001042506	chrX,chrX	-,+	NCRNA00246,PABPC1L2B	-60189,-477
chr16:854326-854526	chr16	+	854331	854407	True	NM_001013638,NM_016541	chr16,chr16	+,-	PRR25,GNG13	1035,-3598
chr9:38396050-38396257	chr9	+	38396054	38396294	True	NM_001007563,NM_000692	chr9,chr9	-,+	IGFBPL1,ALDH1B1	28200,-3403
chr15:76601714-76602159	chr15	+	76601865	76602107	True	NM_001127716,NM_145805,NM_000126	chr15,chr15,chr15	-,+,-	ETFA,ISL2,ETFA	1753,27039,1753
chr19:10532541-10533714	chr19	+	10532639	10533725	True	NM_007065,NM_001111307,NM_001111309,NM_001111308	chr19,chr19,chr19,chr19	-,+,+,+	CDC37,PDE4A,PDE4A,PDE4A	-18368,-1357,9385,7795
chr12:116995862-116996794	chr12	+	116996297	116996809	True	NM_001085481,NM_024738	chr12,chr12	+,-	MAP1LC3B2,C12orf49	376,179084
chr22:39078397-39079138	chr22	+	39078436	39079064	True	NM_014876,NM_020243	chr22,chr22	-,+	JOSD1,TOMM22	17445,-533
chr11:128391380-128391757	chr11	+	128391421	128391596	True	NM_001162422,NM_001167681,NM_005238	chr11,chr11,chr11	-,+,-	ETS1,FLI1,ETS1	660,172214,660
chrX:103500378-103500682	chrX	+	103500415	103500647	True	NM_153448,NM_207318	chrX,chrX	-,+	ESX1,FAM199X	-816,-89165
chr1:22890521-22890741	chr1	+	22890535	22890609	True	NM_020526,NR_036214,NM_001006943	chr1,chr1,chr1	+,-,+	EPHA8,MIR4253,EPHA8	-582,299160,-582
chr15:75917414-75917616	chr15	+	75917417	75917479	True	NM_001042588,NM_001042581,NM_153271,NM_005701	chr15,chr15,chr15,chr15	-,-,+,-	SNUPN,SNUPN,SNX33,SNUPN	1290,1017,23868,1017
chr19:51920778-51921015	chr19	+	51920820	51921004	True	NM_033130,NM_001171156,NM_001171157,NR_033235,NM_001171161,NM_001171160,NM_001171158,NM_001171159	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,+,-,-,-,-	SIGLEC10,SIGLEC10,SIGLEC10,LOC100129083,SIGLEC10,SIGLEC10,SIGLEC10,SIGLEC10	103,103,103,-1711,103,103,103,103
chr1:167487127-167487484	chr1	+	167487133	167487447	True	NM_052862,NM_000734,NM_198053	chr1,chr1,chr1	+,-,-	RCSD1,CD247,CD247	112026,450,450
chr1:15780864-15781495	chr1	+	15781025	15781244	True	NM_033440,NM_001229	chr1,chr1	+,-	CELA2A,CASP9	1978,69747
chr3:160939897-160940224	chr3	+	160939901	160940124	True	NM_015938,NM_033168	chr3,chr3	+,-	NMD3,B3GALNT1	-853,-116741
chr17:81035750-81036173	chr17	+	81035769	81036211	True	NM_001009905,NM_001004431	chr17,chr17	-,+	B3GNTL1,METRNL	-26083,1355
chr10:23982804-23983067	chr10	+	23982810	23983116	True	NM_153714,NM_001098500	chr10,chr10	-,+	C10orf67,KIAA1217	-349038,558
chr6:26189975-26191052	chr6	+	26190049	26190855	True	NM_021065,NM_003522,NM_003530,NM_003523,NM_003539	chr6,chr6,chr6,chr6,chr6	-,+,-,+,-	HIST1H2AD,HIST1H2BF,HIST1H3D,HIST1H2BE,HIST1H4D	8666,8931,8659,-6076,-745
chr3:38690313-38690638	chr3	+	38690416	38690634	True	NM_001160161,NM_001160160,NM_000335,NM_001099405,NM_001099404,NM_005107,NM_198056	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,-,+,-	SCN5A,SCN5A,SCN5A,SCN5A,SCN5A,EXOG,SCN5A	580,580,579,579,579,-152704,579
chr7:139478638-139479038	chr7	+	139478669	139479069	True	NM_001166254,NM_022740,NM_001113239,NM_001130966	chr7,chr7,chr7,chr7	+,-,-,+	TBXAS1,HIPK2,HIPK2,TBXAS1	-676,-976,-976,-676
chr20:32273180-32273573	chr20	+	32273305	32273561	True	NM_005225,NM_001024675	chr20,chr20	-,+	E2F1,C20orf134	699,-19052
chrY:14834958-14835445	chrY	+	14834985	14835267	True	NM_004654,NR_033667	chrY,chrY	+,-	USP9Y,GYG2P1	-21888,-301596
chr10:126629400-126629684	chr10	+	126629601	126629738	True	NM_022802,NM_017580	chr10,chr10	-,+	CTBP2,ZRANB1	86770,953
chr6:122931162-122931401	chr6	+	122931205	122931361	True	NM_020755,NM_181795,NM_032471	chr6,chr6,chr6	-,+,+	SERINC1,PKIB,PKIB	-138253,15,15
chr19:58865607-58867318	chr19	+	58865870	58867069	True	NM_198458,NM_130786,NR_015380	chr19,chr19,chr19	-,-,+	ZNF497,A1BG,A1BG-AS1	7101,-1005,-2585
chr5:176558476-176558869	chr5	+	176558481	176558907	True	NM_172349,NM_022455,NM_001199298	chr5,chr5,chr5	+,+,-	NSD1,NSD1,UIMC1	1172,1925,-124686
chr14:100771946-100772152	chr14	+	100772012	100772080	True	NM_001039355,NR_029906	chr14,chr14	-,+	SLC25A29,MIR345	830,2115
chr19:58617993-58618642	chr19	+	58618418	58618646	True	NM_001145543,NM_007134,NM_001145544,NM_023926	chr19,chr19,chr19,chr19	-,+,-,-	ZSCAN18,ZNF135,ZSCAN18,ZSCAN18	-8688,-47866,-8688,-8688
chr14:47124319-47126180	chr14	+	47124319	47126165	True	NM_020937,NM_080746	chr14,chr14	+,-	FANCM,RPL10L	-1519237,-3291
chr12:119417705-119418620	chr12	+	119417708	119418522	True	NR_024246,NM_194286	chr12,chr12	-,+	LOC144742,SRRM4	322713,777
chr9:116916623-116916832	chr9	+	116916763	116916825	True	NM_138424,NM_032888	chr9,chr9	-,+	KIF12,COL27A1	-55426,1405
chr6:143744552-143746372	chr6	+	143744872	143746204	True	NM_182503,NM_003630	chr6,chr6	-,+	ADAT2,PEX3	25691,25713
chr11:2984051-2985070	chr11	+	2984520	2985104	True	NM_002555,NR_002982	chr11,chr11	+,-	SLC22A18,SNORA54	-61059,69
chr1:38259488-38259728	chr1	+	38259537	38259719	True	NM_001031740,NM_152496,NM_001113482,NM_024640	chr1,chr1,chr1,chr1	+,+,+,-	MANEAL,MANEAL,MANEAL,YRDC	54,1440,54,14196
chr10:6428785-6430332	chr10	+	6428851	6430229	True	NM_004566,NM_006257	chr10,chr10	+,-	PFKFB3,PRKCQ	-184070,192059
chrX:48111823-48113128	chrX	+	48112151	48113129	True	NM_175723,NM_005635	chrX,chrX	-,+	SSX5,SSX1	-55952,1667
chrX:48111823-48113128	chrX	+	47964745	47964804	False	NM_001205103,NR_028366,NR_033730	chrX,chrX,chrX	+,+,-	LOC100509575,SSX6,ZNF630	2572,2562,-33720
chr4:7757155-7757371	chr4	+	7757166	7757352	True	NM_001134647,NR_026892	chr4,chr4	-,+	AFAP1,AFAP1-AS1	184351,-1400
chr7:138458312-138458732	chr7	+	138458362	138458562	True	NM_130841,NM_001085429	chr7,chr7	-,+	ATP6V0A4,TMEM213	270,24176
chr7:152155008-152156665	chr7	+	152155065	152156538	True	NM_170606,NR_027387	chr7,chr7	-,+	MLL3,LOC100128822	-21975,4670
chr20:18478610-18479459	chr20	+	18478713	18479165	True	NM_006606,NM_006363,NM_032986,NM_032985,NM_001172746,NM_001172745	chr20,chr20,chr20,chr20,chr20,chr20	-,+,+,+,+,+	RBBP9,SEC23B,SEC23B,SEC23B,SEC23B,SEC23B	-826,9022,9022,9022,9044,9441
chr7:41729634-41731347	chr7	+	41729875	41731309	True	NM_002192,NR_027119,NR_027118	chr7,chr7,chr7	-,+,+	INHBA,LOC285954,LOC285954	11447,2236,2204
chr14:61186015-61186557	chr14	+	61186169	61186492	True	NM_017420,NM_001177963	chr14,chr14	-,+	SIX4,MNAT1	4411,14966
chr8:144726642-144727018	chr8	+	144726676	144727000	True	NM_014789,NM_001082480,NM_003313	chr8,chr8,chr8	+,+,-	ZNF623,ZNF623,TSTA3	4953,-8354,-26944
chr2:157302766-157303359	chr2	+	157302927	157303413	True	NM_006186,NM_000408	chr2,chr2	-,+	NR4A2,GPD2	-113640,-10091
chr18:6400704-6401505	chr18	+	6400787	6401471	True	NM_173464,NM_001010000	chr18,chr18	-,+	L3MBTL4,ARHGAP28	13489,432960
chr16:29688909-29689404	chr16	+	29688932	29689315	True	NR_002593,NM_014298	chr16,chr16	-,+	SLC7A5P1,QPRT	-63894,1125
chr10:91175464-91175770	chr10	+	91175464	91175623	True	NM_213606,NM_012420	chr10,chr10	-,+	SLC16A12,IFIT5	119753,-1190
chr1:31770451-31771390	chr1	+	31770521	31771216	True	NM_004814,NM_016505	chr1,chr1	-,+	SNRNP40,ZCCHC17	-877,-730
chr5:78985067-78985423	chr5	+	78985096	78985366	True	NM_004272,NM_153610	chr5,chr5	-,+	HOMER1,CMYA5	-175396,292
chr16:70330332-70330909	chr16	+	70330411	70330798	True	NM_001014451,NM_001605,NM_007242,NM_001014449	chr16,chr16,chr16,chr16	+,-,+,+	DDX19B,AARS,DDX19B,DDX19B	2273,-6999,2273,2273
chr7:64765739-64766940	chr7	+	64765738	64766346	True	NM_001007253,NM_007139	chr7,chr7	-,+	ERV3,ZNF92	-298614,72421
chr3:155424376-155425197	chr3	+	155424463	155425199	True	NM_003875,NM_014996	chr3,chr3	+,-	GMPS,PLCH1	163125,-2466
chr20:21376890-21377110	chr20	+	21376968	21377124	True	NM_012255,NM_033176	chr20,chr20	+,-	XRN2,NKX2-4	-93077,973
chr7:141819988-141821270	chr7	+	141819991	141820765	True	NR_024346,NR_003715	chr7,chr7	-,+	MOXD2P,LOC93432	126179,-8493
chr7:138836523-138837817	chr7	+	138836816	138837619	True	NM_024926,NM_024625	chr7,chr7	+,-	TTC26,ZC3HAV1	-18380,-42351
chr11:47874361-47874776	chr11	+	47874373	47874534	True	NM_015231,NM_001098503	chr11,chr11	-,+	NUP160,PTPRJ	-4316,127575
chr20:10655518-10655879	chr20	+	10655668	10655886	True	NM_001009608,NM_000214	chr20,chr20	+,-	C20orf94,JAG1	-239768,-974
chr17:27895116-27895360	chr17	+	27895143	27895409	True	NM_138349,NM_198147	chr17,chr17	+,-	TP53I13,ABHD15	329,-1101
chr7:151510189-151511745	chr7	+	151510329	151511575	True	NM_145292,NM_001040633	chr7,chr7	+,-	GALNTL5,PRKAG2	141888,432
chr4:190203910-190204808	chr4	+	190203965	190204847	True	NR_036692,NM_020040	chr4,chr4	+,-	HSP90AA4P,TUBB4Q	189451,701228
chr9:123343375-123344600	chr9	+	123343389	123344441	True	NR_027442,NM_018249,NM_001011649	chr9,chr9,chr9	+,-,-	LOC100288842,CDK5RAP2,CDK5RAP2	211333,-952,-952
chr2:207657462-207657800	chr2	+	207657468	207657610	True	NR_036077,NR_036078	chr2,chr2	-,+	MIR3130-1,MIR3130-2	-9436,-9568
chr17:66454077-66455162	chr17	+	66454162	66455172	True	NM_017983,NM_212471	chr17,chr17	-,+	WIPI1,PRKAR1A	-509,52937
chr2:101996820-101997125	chr2	+	101996928	101997120	True	NM_017546,NM_153836	chr2,chr2	+,-	C2orf29,CREG2	-127634,6895
chr12:57481666-57482286	chr12	+	57481819	57482323	True	NM_001130963,NM_005967,NM_015257	chr12,chr12,chr12	-,+,-	TMEM194A,NAB2,TMEM194A	-9245,353,-9245
chr10:126493877-126494797	chr10	+	126493999	126494539	True	NM_032182,NM_212554	chr10,chr10	+,-	FAM175B,METTL10	-3706,-13560
chr3:127390431-127390705	chr3	+	127390483	127390751	True	NR_033428,NR_033429,NM_172027,NM_001142646	chr3,chr3,chr3,chr3	+,+,+,-	ABTB1,ABTB1,ABTB1,TPRA1	1029,1029,1029,-80915
chr14:102554375-102554922	chr14	+	102554518	102554867	True	NM_181302,NM_005348	chr14,chr14	+,-	WDR20,HSP90AA1	51344,-1006
chr1:4033522-4034304	chr1	+	4033911	4034291	True	NR_024455,NM_207356	chr1,chr1	+,-	LOC100133612,C1orf174	-216994,-217054
chr9:35732737-35734129	chr9	+	35732970	35733797	True	NM_006289,NM_006368	chr9,chr9	-,+	TLN1,CREB3	-578,-704
chr19:15721651-15722600	chr19	+	15721659	15722490	True	NM_007253,NM_052890	chr19,chr19	+,-	CYP4F8,PGLYRP2	3538,-131344
chr15:40396019-40396395	chr15	+	40396070	40396442	True	NM_001003943,NM_001003942,NM_001003940,NM_001211,NM_033503	chr15,chr15,chr15,chr15,chr15	-,-,-,+,-	BMF,BMF,BMF,BUB1B,BMF	1895,1895,4683,56767,2247
chr7:31091410-31091798	chr7	+	31091495	31091647	True	NM_022728,NM_001199635,NM_001199637,NM_001118,NM_001199636	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	NEUROD6,ADCYAP1R1,ADCYAP1R1,ADCYAP1R1,ADCYAP1R1	288941,428,428,428,428
chr2:174219304-174219563	chr2	+	174219307	174219542	True	NM_031942,NM_145810,NR_033882	chr2,chr2,chr2	+,+,-	CDCA7,CDCA7,LOC339751	18,18,-72543
chr22:20192898-20193173	chr22	+	20192955	20193221	True	NR_026919,NR_031618	chr22,chr22	+,-	LOC150197,MIR1286	633,43563
chr4:169931168-169931516	chr4	+	169931218	169931508	True	NM_001166110,NM_032783	chr4,chr4	+,-	PALLD,CBR4	-178113,10
chr19:58221763-58222680	chr19	+	58221762	58222336	True	NM_001085384,NM_138347	chr19,chr19	-,+	ZNF154,ZNF551	-1183,-28456
chr6:52301697-52303289	chr6	+	52301870	52303291	True	NM_012288,NM_001172420	chr6,chr6	-,+	TRAM2,EFHC1	138621,-16123
chr1:207989191-207990248	chr1	+	207989279	207990179	True	NR_029518,NR_026817	chr1,chr1	-,+	MIR29B2,LOC148696	-13411,1544
chr1:50459258-50460946	chr1	+	50459284	50460501	True	NM_032785,NM_001144777	chr1,chr1	-,+	AGBL4,ELAVL4	29176,53184
chr15:83736546-83736836	chr15	+	83736608	83736854	True	NM_001011885,NM_001144903,NM_025238	chr15,chr15,chr15	-,+,-	BTBD1,TM6SF1,BTBD1	-502,39469,-502
chr5:124144569-124145111	chr5	+	124144605	124145147	True	NM_004384,NM_020747	chr5,chr5	+,-	CSNK1G3,ZNF608	-1296863,-63800
chr2:54017321-54019139	chr2	+	54017533	54018763	True	NM_001127398,NM_145863,NM_016115,NM_001127397,NM_015701,NM_001201965	chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,+,+,-	ERLEC1,ASB3,ASB3,ERLEC1,ERLEC1,ASB3	-3523,-3387,-3387,-3523,-3523,-3548
chr12:52464059-52464613	chr12	+	52464069	52464649	True	NM_001098673,NM_021934,NM_001081492	chr12,chr12,chr12	+,+,-	C12orf44,C12orf44,KRT80	-362,-362,121185
chr11:58910023-58910324	chr11	+	58910080	58910372	True	NM_198847,NM_001142519,NM_001142520,NM_022074,NM_001142521,NM_001039396	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,-	FAM111A,FAM111A,FAM111A,FAM111A,FAM111A,MPEG1	1879,9,9,1879,9,70172
chr16:76412973-76413465	chr16	+	76413016	76413498	True	NM_138994,NM_005548	chr16,chr16	+,-	CNTNAP4,KARS	-69332,-731431
chr16:10784089-10784784	chr16	+	10784117	10784743	True	NM_002484,NM_144674	chr16,chr16	+,-	NUBP1,TEKT5	52954,4109
chr14:81985563-81985935	chr14	+	81985630	81985962	True	NM_005065,NM_000369	chr14,chr14	-,+	SEL1L,TSHR	14293,-563825
chr22:35936505-35936803	chr22	+	35936653	35936839	True	NM_005368,NM_014310	chr22,chr22	-,+	MB,RASD2	76595,512
chr11:3370396-3372115	chr11	+	3370400	3372071	True	NM_001130519,NR_024248	chr11,chr11	-,+	ZNF195,LOC650368	28432,30119
chr10:134903173-134903642	chr10	+	134903189	134903619	True	NM_173572,NM_001083909	chr10,chr10	-,+	C10orf93,GPR123	-147100,-1831
chr6:44126475-44126862	chr6	+	44126540	44126880	True	NM_007058,NM_032111	chr6,chr6	+,-	CAPN11,MRPL14	-43,-31349
chr18:61616592-61617504	chr18	+	61616641	61617283	True	NM_001123366,NR_027245	chr18,chr18	+,-	HMSD,C18orf20	-104,199035
chr10:94823300-94823612	chr10	+	94823343	94823601	True	NM_013451,NM_183374,NM_057157	chr10,chr10,chr10	-,+,+	MYOF,CYP26C1,CYP26A1	418523,-2380,9630
chr1:92494818-92495419	chr1	+	92494845	92495409	True	NM_001195684,NM_173567	chr1,chr1	-,+	TGFBR3,EPHX4	-123286,123
chr11:47399908-47400197	chr11	+	47400062	47400206	True	NM_003120,NM_001128225,NM_001080547	chr11,chr11,chr11	-,+,-	SPI1,SLC39A13,SPI1	-21,29839,-21
chr14:55737627-55737995	chr14	+	55737731	55737936	True	NM_017943,NM_014750,NM_152231	chr14,chr14,chr14	+,-,+	FBXO34,DLGAP5,FBXO34	84,-79335,935
chr15:35280580-35280856	chr15	+	35280673	35280906	True	NM_014106,NR_003144	chr15,chr15	-,+	ZNF770,LOC723972	-176,248620
chr17:37794333-37795971	chr17	+	37794445	37795907	True	NM_001165937,NM_181505,NM_001165938,NM_006160,NM_006804	chr17,chr17,chr17,chr17,chr17	+,+,+,-,+	STARD3,PPP1R1B,STARD3,NEUROD2,STARD3	-1163,-9743,-1163,-30270,-1163
chr11:67072498-67072748	chr11	+	67072511	67072657	True	NM_021173,NM_017857	chr11,chr11	-,+	POLD4,SSH3	48445,-1643
chr11:121987153-121988997	chr11	+	121987162	121988723	True	NM_032873,NM_001001786	chr11,chr11	+,-	UBASH3B,BLID	537674,-239
chr15:66084952-66085813	chr15	+	66084965	66085346	True	NM_004663,NM_005848,NM_001144823	chr15,chr15,chr15	+,-,-	RAB11A,DENND4A,DENND4A	76449,-334,-334
chr1:120144082-120144831	chr1	+	120144100	120144866	True	NR_033781,NR_036540	chr1,chr1	+,-	HSD3BP4,LOC644242	-37656,-2186
chr8:13344534-13345173	chr8	+	13344593	13345047	True	NM_001007090,NM_182643	chr8,chr8	+,-	C8orf48,DLC1	79304,27432
chrX:48430712-48431554	chrX	+	48431099	48431469	True	NM_006743,NM_033518	chrX,chrX	+,-	RBM3,SLC38A5	1366,-102455
chr16:88801346-88801683	chr16	+	88801350	88801682	True	NM_178841,NM_001012762	chr16,chr16	-,+	RNF166,CTU2	-28521,-28510
chr10:13142556-13143415	chr10	+	13142626	13143395	True	NM_031455,NM_021980,NM_001008212,NM_001008213,NM_001008211	chr10,chr10,chr10,chr10,chr10	-,+,+,+,+	CCDC3,OPTN,OPTN,OPTN,OPTN	-98922,-595,-595,-595,-595
chr22:43507827-43508498	chr22	+	43507918	43508191	True	NM_001197,NR_027779	chr22,chr22	+,-	BIK,TTLL1	-1212,-22484
chr8:145722378-145722738	chr8	+	145722602	145722686	True	NM_032902,NM_005309,NM_004260	chr8,chr8,chr8	+,+,-	PPP1R16A,GPT,RECQL4	-544,6778,20574
chr7:22550552-22550795	chr7	+	22550721	22550783	True	NM_001164460,NM_000600	chr7,chr7	-,+	MGC87042,IL6	-10820,215982
chr7:22550552-22550795	chr6	+	74228207	74228269	False	NM_001402,NM_133645	chr6,chr6	-,+	EEF1A1,MTO1	2536,-56808
chr7:22550552-22550795	chr9	-	135895708	135895770	False	NM_001122823,NM_001162427	chr9,chr9	+,-	GTF3C5,TSC1	10291,-75688
chr2:169308497-169309855	chr2	+	169308776	169309741	True	NM_203463,NM_013233	chr2,chr2	+,-	LASS6,STK39	3093,-204671
chr2:220297548-220299254	chr2	+	220297661	220299014	True	NM_012100,NM_005876	chr2,chr2	-,+	DNPEP,SPEG	-44999,685
chr8:7813373-7814093	chr8	+	7813790	7814134	True	NR_003668,NR_027424	chr8,chr8	-,+	DEFB109P1B,FAM66E	40959,-1306
chr8:7813373-7814093	chr8	+	12220789	12221133	False	NR_024044,NR_026789	chr8,chr8	-,+	DEFB109P1,FAM66A	36791,-1312
chr10:72544384-72545676	chr10	+	72544443	72545641	True	NM_003901,NM_152710	chr10,chr10	+,-	SGPL1,C10orf27	30062,116
chr1:161782475-161783967	chr1	+	161782503	161783611	True	NM_007348,NR_002595	chr1,chr1	+,-	ATF6,RPL31P11	-46484,-127461
chr18:44705354-44706507	chr18	+	44705458	44706495	True	NM_016097,NM_031303	chr18,chr18	-,+	IER3IP1,KATNAL2	-2713,-178734
chr3:72948175-72948823	chr3	+	72948366	72948842	True	NM_001080393,NM_018130	chr3,chr3	+,-	GXYLT2,SHQ1	-11036,-50768
chr10:12171048-12171506	chr10	+	12171211	12171421	True	NM_018144,NR_024576,NR_024577,NM_014142,NM_001142628,NM_001142627	chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,-,+,+	SEC61A2,SEC61A2,SEC61A2,NUDT5,SEC61A2,SEC61A2	218,218,218,66772,218,218
chr2:71454540-71454906	chr2	+	71454583	71454877	True	NM_005791,NM_020459	chr2,chr2	+,-	MPHOSPH10,PAIP2B	-97190,-350
chr13:24154099-24155151	chr13	+	24154240	24154997	True	NM_148957,NM_001204458,NM_001204459,NM_014363,NM_018647	chr13,chr13,chr13,chr13,chr13	+,+,+,-,+	TNFRSF19,TNFRSF19,TNFRSF19,SACS,TNFRSF19	-9783,-793,-9783,-146399,-793
chr8:7954498-7955934	chr8	+	7954705	7955337	True	NR_031689,NR_024362	chr8,chr8	-,+	MIR548I3,FLJ10661	-8094,130754
chr8:7954498-7955934	chr8	-	12485246	12485334	False	NR_037492,NR_037495	chr8,chr8	-,+	MIR3926-1,MIR3926-2	99536,99411
chr8:7954498-7955934	chr8	-	7047207	7047657	False	NR_027000,NM_001164452	chr8,chr8	-,+	LOC349196,FAM90A14	73414,66768
chr13:60737577-60737807	chr13	+	60737576	60737832	True	NM_001042517,NM_001146071	chr13,chr13	-,+	DIAPH3,TDRD3	337,232758
chr11:1646825-1647140	chr11	+	1646927	1647173	True	NM_001012709,NM_001001480	chr11,chr11	-,+	KRTAP5-4,KRTAP5-5	-3559,3859
chr13:36940941-36941163	chr13	+	36940955	36941115	True	NM_001111046,NM_001142294	chr13,chr13	+,-	CCNA1,SPG20	64851,3252
chr4:190202894-190203910	chr4	+	190202911	190203958	True	NR_036692,NM_020040	chr4,chr4	+,-	HSP90AA4P,TUBB4Q	190340,702125
chr1:206865128-206865825	chr1	+	206865135	206865694	True	NM_032960,NM_004759,NM_006893	chr1,chr1,chr1	+,+,-	MAPKAPK2,MAPKAPK2,EIF2D	-6897,-6897,-79231
chr15:79166044-79166803	chr15	+	79166136	79166672	True	NM_014272,NM_206839,NM_006791	chr15,chr15,chr15	-,+,+	ADAMTS7,MORF4L1,MORF4L1	-62363,-1015,-1015
chr1:147140824-147141753	chr1	+	147140844	147141746	True	NM_004326,NM_016361	chr1,chr1	+,-	BCL9,ACP6	-127718,938
chr11:93788223-93788692	chr11	+	93788222	93788712	True	NM_001098672,NM_001144871	chr11,chr11	+,-	HEPHL1,C11orf90	-33899,-204554
chr4:20702266-20702911	chr4	+	20702363	20702949	True	NM_001130727,NM_147181,NM_145048	chr4,chr4,chr4	+,-,+	PACRGL,KCNIP4,PACRGL	-380,149392,-380
chr15:45119741-45120455	chr15	+	45119740	45120504	True	NM_182985,NM_001145112	chr15,chr15	+,-	TRIM69,PATL2	-91231,-150654
chr15:45119741-45120455	chr15	-	45364991	45365241	False	NM_207581,NM_014080	chr15,chr15	+,-	DUOXA2,DUOX2	41281,41168
chrX:46404589-46404872	chrX	+	46404588	46404901	True	NM_001039891,NM_001146291,NR_015378,NM_001190417	chrX,chrX,chrX,chrX	-,-,+,-	ZNF674,ZNF674,LOC401588,ZNF674	41,41,26,41
chr16:67963636-67963987	chr16	+	67963642	67963982	True	NM_006742,NM_001907,NM_002801	chr16,chr16,chr16	+,-,-	PSKH1,CTRL,PSMB10	-36518,1846,6848
chr7:92890844-92891076	chr7	+	92891026	92891102	True	NM_017667,NM_001039372	chr7,chr7	+,-	CCDC132,HEPACAM2	-29424,-35244
chr19:7693273-7694219	chr19	+	7693378	7694236	True	NM_006949,NR_033242,NM_020196,NM_174895,NM_001127396,NM_001171155	chr19,chr19,chr19,chr19,chr19,chr19	+,+,-,-,+,+	STXBP2,LOC100131801,XAB2,PCP2,STXBP2,LOC100131801	7754,434,253,4384,7754,434
chr8:37759804-37761271	chr8	+	37759846	37761140	True	NM_001002814,NM_025151,NM_032777	chr8,chr8,chr8	-,-,+	RAB11FIP1,RAB11FIP1,GPR124	-2831,-2831,-105496
chr18:13726749-13726954	chr18	+	13726816	13726902	True	NM_003799,NM_152352,NM_001098801	chr18,chr18,chr18	+,-,-	RNMT,C18orf19,C18orf19	-163,-225,-225
chr19:20600519-20602030	chr19	+	20600712	20601780	True	NR_036455,NM_052852	chr19,chr19	-,+	ZNF826P,ZNF486	6049,-322688
chr12:122152558-122153609	chr12	+	122152777	122153657	True	NM_173855,NM_001080825	chr12,chr12	-,+	MORN3,TMEM120B	-45217,-2170
chr1:149764788-149765246	chr1	+	149764986	149765276	True	NM_001161334,NM_000566	chr1,chr1	-,+	HIST2H2BF,FCGR1A	18702,-10787
chr1:149764788-149765246	chr1	-	120924931	120924981	False	NM_001004340,NR_027337	chr1,chr1	-,+	FCGR1B,HIST2H2BA	11013,-18948
chr1:149764788-149765246	chr1	+	149380056	149380348	False	NR_027484,NM_001024599	chr1,chr1	+,-	FCGR1C,HIST2H2BF	-10813,18931
chr20:30414911-30415615	chr20	+	30414947	30415659	True	NM_004118,NM_033118	chr20,chr20	-,+	FOXS1,MYLK2	17811,-7824
chr12:2946725-2948095	chr12	+	2947076	2948017	True	NM_018463,NM_031474	chr12,chr12	+,-	ITFG2,NRIP2	-25341,-2855
chr3:10324000-10324328	chr3	+	10324049	10324361	True	NM_001134941,NR_026829,NR_004431,NM_016362,NR_024145,NR_024144,NR_024146	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,+,-,+,+,+	GHRL,C3orf42,GHRLOS,GHRL,GHRLOS,GHRLOS,GHRLOS	8108,1741,3076,8108,3076,3076,3076
chr13:32888961-32889559	chr13	+	32889023	32889509	True	NM_000059,NM_001136571	chr13,chr13	+,-	BRCA2,ZAR1L	107,-2932
chr10:102987213-102987639	chr10	+	102987218	102987686	True	NM_006562,NR_029380	chr10,chr10	-,+	LBX1,FLJ41350	1081,1664
chr1:233465322-233466947	chr1	+	233465508	233466822	True	NM_032435,NM_014801	chr1,chr1	+,-	KIAA1804,PCNXL2	-2045,-34049
chrX:75003086-75004165	chrX	+	75003271	75004201	True	NM_016500,NM_138703	chrX,chrX	+,-	CXorf26,MAGEE2	388569,928
chr12:75884315-75886155	chr12	+	75884750	75885804	True	NM_007043,NM_006851	chr12,chr12	-,+	KRR1,GLIPR1	19675,-10289
chr12:103350039-103350251	chr12	+	103350129	103350221	True	NM_000277,NM_004316	chr12,chr12	-,+	PAH,ASCL1	-38748,1230
chr14:56264649-56265627	chr14	+	56264903	56265627	True	NR_026796,NR_026797,NR_004844	chr14,chr14,chr14	-,-,+	C14orf34,C14orf34,RPL13AP3	-1511,-1511,-31992
chr16:75676501-75677366	chr16	+	75676581	75677191	True	NM_005548,NM_001130089,NM_018975	chr16,chr16,chr16	-,-,+	KARS,KARS,TERF2IP	4444,4444,4443
chr10:51578551-51579245	chr10	+	51578722	51579294	True	NM_005437,NM_001145262,NM_006327	chr10,chr10,chr10	+,+,-	NCOA4,NCOA4,TIMM23	-6420,-2499,44092
chr21:15753833-15755030	chr21	+	15753911	15755011	True	NR_003087,NM_006948	chr21,chr21	+,-	ABCC13,HSPA13	-107848,548
chr8:1449171-1449557	chr8	+	1449174	1449512	True	NM_004745,NR_033895	chr8,chr8	+,-	DLGAP2,LOC286083	56,-198347
chr2:91760229-91762057	chr2	+	91760542	91762026	True	NR_003503,NR_027238	chr2,chr2	+,-	GGT8P,LOC654342	201341,85999
chr5:99424302-99425543	chr5	+	99424632	99425579	True	NM_198507,NR_027503	chr5,chr5	+,-	FAM174A,LOC100133050	445544,298429
chr5:99424302-99425543	chr5	-	98821290	98821348	False	NM_001270,NR_036530	chr5,chr5	-,+	CHD1,LOC100289230	-559052,-556511
chr16:3332124-3332497	chr16	+	3332277	3332485	True	NM_005741,NM_033208	chr16,chr16	+,-	ZNF263,TIGD7	1001,23004
chr22:41681703-41682066	chr22	+	41681702	41682014	True	NM_017590,NM_002883	chr22,chr22	+,-	ZC3H7B,RANGAP1	15552,252
chr17:13927538-13928658	chr17	+	13927571	13928677	True	NR_003261,NM_001007530	chr17,chr17	+,-	CDRT15P,CDRT15	-63,211523
chr3:195889729-195889990	chr3	+	195889734	195889834	True	NR_034088,NM_001039617	chr3,chr3	+,-	LOC401109,ZDHHC19	-20281,48516
chr8:19165826-19167361	chr8	+	19165874	19167298	True	NM_001174160,NM_001174159,NM_001130518,NM_022071	chr8,chr8,chr8,chr8	+,+,-,+	SH2D4A,SH2D4A,CSGALNACT1,SH2D4A	3782,4188,292808,3782
chr12:29650241-29650631	chr12	+	29650258	29650348	True	NM_018099,NM_183378	chr12,chr12	+,-	FAR2,OVCH1	-273712,321
chrX:152761036-152761776	chrX	+	152761115	152761747	True	NM_001711,NM_017518	chrX,chrX	+,-	BGN,HAUS7	-819,-24512
chr3:181428460-181429564	chr3	+	181428674	181429486	True	NR_033725,NM_003106	chr3,chr3	-,+	DNAJC19,SOX2	-721112,225
chr19:41724882-41725150	chr19	+	41724960	41725028	True	NM_001699,NM_000660,NM_021913	chr19,chr19,chr19	+,-,+	AXL,TGFB1,AXL	79,134853,79
chr12:110570119-110570983	chr12	+	110570366	110570712	True	NM_207435,NM_031473,NM_001143779,NM_014055	chr12,chr12,chr12,chr12	-,+,+,+	C12orf76,IFT81,IFT81,IFT81	-64866,-8290,-8290,-8290
chr2:10089815-10090572	chr2	+	10090155	10090388	True	NM_001037160,NM_198182	chr2,chr2	-,+	CYS1,GRHL1	130201,1403
chr7:73274693-73275434	chr7	+	73275304	73275380	True	NM_152559,NM_182504	chr7,chr7	-,+	WBSCR27,WBSCR28	-18449,108
chr2:120769960-120770479	chr2	+	120769972	120770324	True	NM_020909,NM_001184937,NM_001184938,NM_001184939,NR_000034	chr2,chr2,chr2,chr2,chr2	+,+,+,+,-	EPB41L5,EPB41L5,EPB41L5,EPB41L5,TMEM185B	279,279,460,279,210718
chr7:80120907-80121365	chr7	+	80120943	80121087	True	NM_001102386,NM_001001547	chr7,chr7	-,+	GNAT3,CD36	20205,110416
chrX:151919110-151919499	chrX	+	151919138	151919496	True	NM_001129826,NM_004909,NM_005361,NM_175742,NM_001129828,NM_175743,NM_153488,NM_001080848	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,-,-,+,-,-,+	CSAG3,CSAG2,MAGEA2,MAGEA2,CSAG3,MAGEA2,MAGEA2B,CSAG2	8314,8237,2918,2918,8237,2918,653,8237
chrX:151919110-151919499	chrX	-	151885986	151886344	False	NM_001129826,NM_004909,NM_005361,NM_175742,NM_001129828,NM_175743,NM_153488,NM_001080848	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,+,+,-,+,+,-	CSAG3,CSAG2,MAGEA2,MAGEA2,CSAG3,MAGEA2,MAGEA2B,CSAG2	-8316,-8239,-2918,-2918,-8239,-2918,-653,-8239
chr1:182424571-182426164	chr1	+	182424877	182425932	True	NM_172000,NM_001137669	chr1,chr1	-,+	TEDDM1,RGSL1	-55126,-5672
chr19:44664107-44665620	chr19	+	44664295	44665027	True	NR_033341,NM_001032372,NM_001032373,NM_001032374,NM_015919,NM_001146220	chr19,chr19,chr19,chr19,chr19,chr19	-,+,+,+,+,+	LOC100379224,ZNF226,ZNF226,ZNF226,ZNF226,ZNF226	-46959,4289,4221,4221,4221,4187
chr1:86622393-86622606	chr1	+	86622399	86622573	True	NM_152890,NM_006536	chr1,chr1	-,+	COL24A1,CLCA2	-278,267195
chr14:58766308-58767520	chr14	+	58766610	58767200	True	NM_023000,NM_023001,NM_002892,NR_029434,NR_029435	chr14,chr14,chr14,chr14,chr14	+,+,+,-,-	ARID4A,ARID4A,ARID4A,FLJ31306,FLJ31306	-1439,-1439,-1439,-1755,-1755
chr19:13261200-13261582	chr19	+	13261257	13261415	True	NM_004907,NM_003765	chr19,chr19	+,-	IER2,STX10	-26,-270
chr7:73037270-73037625	chr7	+	73037271	73037636	True	NM_032951,NM_032952,NM_032953,NM_032954,NM_001077621	chr7,chr7,chr7,chr7,chr7	-,-,-,-,+	MLXIPL,MLXIPL,MLXIPL,MLXIPL,VPS37D	1284,1284,1284,1284,44537
chr18:29784279-29786103	chr18	+	29784280	29785855	True	NM_005925,NM_014939	chr18,chr18	+,-	MEP1B,TRAPPC8	-14345,-261189
chr4:41361621-41361961	chr4	+	41361722	41361936	True	NM_001112717,NM_173075,NM_014988,NM_001112718	chr4,chr4,chr4,chr4	+,-,+,+	LIMCH1,APBB2,LIMCH1,LIMCH1	867,-145087,867,867
chr2:220365547-220366812	chr2	+	220365573	220366745	True	NM_013335,NM_205847,NM_001195731	chr2,chr2,chr2	+,+,-	GMPPA,GMPPA,CHPF	-2038,-2008,41124
chr7:26582571-26583747	chr7	+	26582832	26583748	True	NR_022006,NM_001145531	chr7,chr7	-,+	KIAA0087,C7orf71	-4388,93741
chr14:69728340-69728993	chr14	+	69728351	69728913	True	NM_003861,NM_020692,NM_001168368	chr14,chr14,chr14	-,+,+	DCAF5,GALNTL1,GALNTL1	-108437,-1721,-1721
chr8:58925584-58926698	chr8	+	58925797	58926683	True	NM_000780,NM_147189	chr8,chr8	-,+	CYP7A1,FAM110B	486087,-18742
chr5:741271-742501	chr5	+	741299	742240	True	NM_018140,NM_007030	chr5,chr5	+,-	CEP72,TPPP	-128946,-47789
chr5:741271-742501	chr5	+	833478	834246	False	NM_001166260,NM_024786	chr5,chr5	+,-	TRIP13,ZDHHC11	58722,16917
chr17:6618854-6620540	chr17	+	6619481	6620365	True	NM_177550,NM_001143838,NM_017523	chr17,chr17,chr17	-,-,+	SLC13A5,SLC13A5,XAF1	-2741,-2741,38790
chr12:58004037-58004449	chr12	+	58004142	58004444	True	NM_001111270,NM_182947,NM_001478,NM_178502,NM_133489	chr12,chr12,chr12,chr12,chr12	+,+,-,+,+	ARHGEF25,ARHGEF25,B4GALNT1,DTX3,SLC26A10	-230,773,22591,-5589,9248
chr8:22438508-22438787	chr8	+	22438578	22438653	True	NR_027715,NM_198042,NM_176871,NM_021630	chr8,chr8,chr8,chr8	-,+,+,+	FLJ14107,PDLIM2,PDLIM2,PDLIM2	61120,-642,-642,-2375
chr11:118016981-118017242	chr11	+	118017173	118017291	True	NR_024527,NM_001142349,NM_001142348,NM_019894,NM_174934	chr11,chr11,chr11,chr11,chr11	-,-,-,+,-	SCN4B,SCN4B,SCN4B,TMPRSS4,SCN4B	-989,-989,6391,-69498,6391
chrX:48958466-48958829	chrX	+	48958482	48958820	True	NM_001163323,NM_007075	chrX,chrX	+,-	CCDC120,WDR45	-42010,-423
chr14:77737659-77738253	chr14	+	77737724	77738099	True	NM_021257,NR_031661	chr14,chr14	-,+	NGB,MIR1260	-69,-5214
chr2:112252232-112252751	chr2	+	112252241	112252711	True	NR_024373,NM_207003,NR_015395	chr2,chr2,chr2	-,+,-	LOC541471,BCL2L11,LOC541471	31,-373801,31
chr2:112252232-112252751	chr2	-	87754913	87755294	False	NM_001078170,NR_024206,NR_024204,NR_024205	chr2,chr2,chr2,chr2	-,+,+,+	RGPD2,NCRNA00152,NCRNA00152,NCRNA00152	370043,10,10,10
chr3:63304524-63305666	chr3	+	63304785	63305596	True	NM_001130003,NM_183394	chr3,chr3	+,-	SYNPR,CADPS	-40922,-443721
chr16:51186047-51186284	chr16	+	51186064	51186256	True	NM_002968,NM_001042412,NM_001127892	chr16,chr16,chr16	-,+,-	SALL1,CYLD,SALL1	-881,-410086,-1556
chr16:16324718-16325450	chr16	+	16324799	16325169	True	NM_001171,NM_001079528,NM_001004067	chr16,chr16,chr16	-,-,+	ABCC6,ABCC6,NOMO3	-7471,-7471,1219
chr16:16324718-16325450	chr16	+	14925965	14926015	False	NR_023387,NM_014287	chr16,chr16	-,+	ABCC6P2,NOMO1	-7406,1627
chr16:16324718-16325450	chr16	-	18574727	18574781	False	NM_001004060,NM_173614,NR_003569	chr16,chr16,chr16	-,-,+	NOMO2,NOMO2,ABCC6P1	-1293,-1293,7788
chr8:22019714-22020103	chr8	+	22019847	22020031	True	NM_139278,NM_001199,NM_001172357,NR_033403,NR_033404,NM_001172410,NM_006129,NM_003018	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,+,+,+,+,+,+,+	LGI3,BMP1,SFTPC,BMP1,BMP1,SFTPC,BMP1,SFTPC	-5503,2621,-714,2621,2621,-714,2621,-714
chr22:21045939-21046218	chr22	+	21046086	21046150	True	NM_002650,NR_026815,NR_024592	chr22,chr22,chr22	-,+,+	PI4KA,TMEM191A,POM121L4P	42855,9251,-2294
chr3:46740142-46741154	chr3	+	46740141	46741116	True	NM_001190707,NM_147196,NR_033815,NM_147129	chr3,chr3,chr3,chr3	-,+,-,-	ALS2CL,TMIE,ALS2CL,ALS2CL	-4995,1706,-4947,-4947
chrX:151936413-151936903	chrX	+	151936503	151936949	True	NM_001129826,NM_001129828,NM_005362,NM_004909,NM_001080848	chrX,chrX,chrX,chrX,chrX	+,+,-,+,+	CSAG3,CSAG3,MAGEA3,CSAG2,CSAG2	-8743,-8820,1341,-8820,-8820
chrX:151936413-151936903	chrX	-	151868527	151868973	False	NM_001129826,NM_005363,NM_001129828,NM_175868,NM_004909,NM_001080848	chrX,chrX,chrX,chrX,chrX,chrX	-,+,-,+,-,-	CSAG3,MAGEA6,CSAG3,MAGEA6,CSAG2,CSAG2	8747,-1333,8824,-1333,8824,8824
chr21:45287182-45287563	chr21	+	45287190	45287598	True	NR_026961,NM_020132	chr21,chr21	-,+	LOC284837,AGPAT3	-54742,-2125
chr4:41259785-41260073	chr4	+	41259926	41260080	True	NM_173075,NM_004181	chr4,chr4	-,+	APBB2,UCHL1	-43291,-1079
chr5:173135947-173137735	chr5	+	173135991	173137222	True	NR_027109,NM_138369	chr5,chr5	+,-	LOC285593,BOD1	-129389,-92325
chr2:27534591-27535896	chr2	+	27534605	27535845	True	NM_003353,NM_187841	chr2,chr2	-,+	UCN,TRIM54	-3475,-29359
chr19:55046615-55047916	chr19	+	55046988	55047662	True	NR_026716,NM_145057	chr19,chr19	+,-	KIR3DX1,CDC42EP5	-3130,-62566
chr1:38410446-38411486	chr1	+	38410580	38411347	True	NM_005540,NM_016037	chr1,chr1	-,+	INPP5B,UTP11L	1433,67036
chr1:23523434-23524584	chr1	+	23523448	23524495	True	NR_036057,NM_000864	chr1,chr1	+,-	MIR3115,HTR1D	-152707,-2226
chr6:15090277-15091203	chr6	+	15090307	15090981	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	155545,572358
chr2:45615-45841	chr2	+	45615	45799	True	NM_001077710,NM_001040649	chr2,chr2	-,+	FAM110C,ACP1	839,219069
chr14:105765364-105766393	chr14	+	105765527	105766197	True	NM_001519,NM_001100913	chr14,chr14	-,+	BRF1,PACS2	1186,14883
chr19:13621601-13622015	chr19	+	13621665	13621849	True	NM_001127222,NM_001127221,NM_000068,NM_001174080,NM_023035,NM_030818	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,+	CACNA1A,CACNA1A,CACNA1A,CACNA1A,CACNA1A,CCDC130	-4391,-4391,-4391,-4391,-4391,236903
chr10:120965250-120965894	chr10	+	120965318	120965914	True	NM_005308,NM_014098	chr10,chr10	+,-	GRK5,PRDX3	1282,-26973
chr10:46168639-46170521	chr10	+	46168720	46170080	True	NM_174890,NM_001169106,NM_001128324	chr10,chr10,chr10	-,+,-	ANUBL1,FAM21C,ANUBL1	-469,52567,-469
chr10:86007500-86008182	chr10	+	86007639	86008089	True	NM_001012720,NM_001012722,NM_015613,NM_002921	chr10,chr10,chr10,chr10	+,+,-,+	RGR,RGR,LRIT1,RGR	-2882,-2882,-6422,-2882
chr14:75597372-75597740	chr14	+	75597535	75597744	True	NM_033116,NM_024643	chr14,chr14	-,+	NEK9,FAM164C	-3757,-61287
chr11:69633824-69634047	chr11	+	69633906	69634004	True	NM_005247,NM_053056	chr11,chr11	-,+	FGF3,CCND1	238,-178084
chr17:39636371-39636902	chr17	+	39636375	39636935	True	NM_005801,NM_003771,NM_002280	chr17,chr17,chr17	+,-,-	EIF1,KRT36,KRT35	208191,9231,507
chr1:117453400-117453601	chr1	+	117453400	117453540	True	NM_020440,NM_001145635	chr1,chr1	+,-	PTGFRN,TRIM45	-762,210921
chr2:20429935-20431016	chr2	+	20429939	20430911	True	NM_004040,NM_002997,NM_001006946	chr2,chr2,chr2	+,-,-	RHOB,SDC1,SDC1	215923,-5012,-4745
chr5:10627603-10628383	chr5	+	10627701	10628259	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-63326,133180
chr16:87970441-87970652	chr16	+	87970440	87970652	True	NM_001173539,NM_001739	chr16,chr16	+,-	BANP,CA5A	14385,-328
chr8:144909573-144909850	chr8	+	144909662	144909882	True	NM_078480,NR_033849,NM_014281,NM_001136033	chr8,chr8,chr8,chr8	-,+,-,-	PUF60,LOC100128338,PUF60,PUF60	1705,-93403,1705,1364
chr8:96037529-96038414	chr8	+	96037636	96038282	True	NR_037484,NM_152416	chr8,chr8	-,+	MIR3150B,C8orf38	46996,-466
chr1:243990225-243991311	chr1	+	243990558	243991328	True	NM_181690,NR_033883	chr1,chr1	-,+	AKT3,LOC339529	15289,89375
chr17:7621068-7622393	chr17	+	7621345	7622367	True	NM_001126114,NM_020877	chr17,chr17	-,+	TP53,DNAH2	-30482,671
chr3:179183251-179184005	chr3	+	179183437	179183800	True	NM_004301,NM_021629	chr3,chr3	+,-	ACTL6A,GNB4	96907,-14066
chr20:45989716-45990096	chr20	+	45989720	45990089	True	NM_183048,NR_024594,NM_012408,NM_183047	chr20,chr20,chr20,chr20	-,+,-,-	ZMYND8,LOC100131496,ZMYND8,ZMYND8	-4246,-42525,-4246,-4246
chr2:242446933-242447135	chr2	+	242447007	242447181	True	NM_032515,NM_006374	chr2,chr2	+,-	BOK,STK25	51010,903
chr19:14911483-14913051	chr19	+	14911556	14913044	True	NM_032433,NM_198944	chr19,chr19	+,-	ZNF333,OR7C1	-110738,-608
chr16:55359353-55359628	chr16	+	55359520	55359676	True	NR_034105,NM_024335	chr16,chr16	-,+	CRNDE,IRX6	-396441,-1109
chr21:39871535-39873284	chr21	+	39871990	39873332	True	NM_182918,NM_170737,NM_001136155	chr21,chr21,chr21	-,+,-	ERG,KCNJ15,ERG	-1562,-227612,-1562
chr4:119273339-119273588	chr4	+	119273395	119273505	True	NR_002963,NM_003619	chr4,chr4	+,-	SNORA24,PRSS12	-73101,467
chr10:95255133-95255529	chr10	+	95255244	95255566	True	NM_001127182,NM_133337,NM_018131	chr10,chr10,chr10	+,-,+	CEP55,MYOF,CEP55	802,-13170,822
chr14:39735931-39736251	chr14	+	39735951	39736225	True	NM_005930,NM_203355,NM_203356,NM_177452,NM_203354	chr14,chr14,chr14,chr14,chr14	+,+,+,-,+	CTAGE5,CTAGE5,CTAGE5,TRAPPC6B,CTAGE5	102,102,-500,-96317,-1526
chr2:48010688-48010957	chr2	+	48010809	48010919	True	NM_025133,NM_000179	chr2,chr2	-,+	FBXO11,MSH6	104989,-639
chr17:15227337-15229276	chr17	+	15227367	15229311	True	NM_031898,NR_033371	chr17,chr17	-,+	TEKT3,CDRT7	15697,-293126
chr1:202853106-202853699	chr1	+	202853167	202853668	True	NM_002871,NR_002929	chr1,chr1	-,+	RABIF,LOC148709	4645,-22336
chr11:64490920-64491136	chr11	+	64490993	64491087	True	NM_153378,NM_138732,NM_015080	chr11,chr11,chr11	+,-,-	SLC22A12,NRXN2,NRXN2	-132762,-333,-333
chr12:186478-186791	chr12	+	186588	186746	True	NM_015232,NR_026823	chr12,chr12	+,-	IQSEC3,FAM138D	-97,-37176
chr12:186478-186791	chr20	-	62948581	62948739	False	NM_001104925,NM_005286	chr20,chr20	+,-	PCMTD2,NPBWR2	-61584,-210397
chr19:35821632-35821915	chr19	+	35821636	35821820	True	NM_152481,NM_001771,NM_001185099,NM_001185100,NM_001185101	chr19,chr19,chr19,chr19,chr19	-,+,+,+,+	FAM187B,CD22,CD22,CD22,CD22	-102008,-1615,-1615,-1615,-1615
chr1:24651113-24652246	chr1	+	24651112	24652130	True	NM_198173,NM_021180,NM_001195010,NM_001199013,NM_198174	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	GRHL3,GRHL3,GRHL3,C1orf201,GRHL3	-5351,-1633,-5107,88182,-5351
chr2:216297467-216298544	chr2	+	216297606	216298506	True	NM_004044,NM_002026,NM_054034,NM_212476,NM_212474,NM_212482,NM_212478	chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-,-	ATIC,FN1,FN1,FN1,FN1,FN1,FN1	-120978,2347,2347,2347,2347,2347,2347
chr18:37308788-37309257	chr18	+	37308878	37309227	True	NR_024391,NR_036202	chr18,chr18	-,+	LOC647946,MIR4318	22789,-2071837
chr17:29892036-29892802	chr17	+	29892263	29892833	True	NR_029710,NR_029856,NM_014210	chr17,chr17,chr17	+,+,-	MIR193A,MIR365-2,EVI2A	-5299,9596,-243496
chr6:24137932-24138887	chr6	+	24138142	24138842	True	NM_016356,NM_080723	chr6,chr6	-,+	DCDC2,NRSN1	219488,-11779
chr11:111942789-111943126	chr11	+	111942850	111942946	True	NM_138789,NM_001082969,NM_018195,NM_001082619,NM_001082970	chr11,chr11,chr11,chr11,chr11	-,+,+,-,+	PIH1D2,C11orf57,C11orf57,PIH1D2,C11orf57	2007,2021,2021,2007,2021
chr10:95256626-95257181	chr10	+	95256641	95257013	True	NM_001127182,NM_133337,NM_018131	chr10,chr10,chr10	+,-,+	CEP55,MYOF,CEP55	-323,-14567,-303
chr11:30349445-30349732	chr11	+	30349544	30349633	True	NM_152316,NM_001584	chr11,chr11	+,-	C11orf46,MPPED2	-4955,252464
chr3:50353947-50355880	chr3	+	50353963	50355234	True	NM_007022,NM_153281,NM_033158,NM_003773	chr3,chr3,chr3,chr3	+,-,-,-	CYB561D2,HYAL1,HYAL2,HYAL2	33062,-4151,5098,5098
chr1:44590325-44591786	chr1	+	44590587	44591682	True	NM_001024845,NM_173484	chr1,chr1	-,+	SLC6A9,KLF17	-93453,-6126
chr20:42840783-42841248	chr20	+	42840816	42841033	True	NM_024034,NM_016470	chr20,chr20	+,-	GDAP1L1,C20orf111	34874,-1385
chrX:48755110-48755450	chrX	+	48755115	48755375	True	NM_001032384,NM_001032381,NM_005834,NM_001032383,NM_001032382,NM_005710,NM_001167947,NM_001167989,NM_001167990,NM_144495,NM_001167992	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,-,+,+,+,-,+,+,+,+	PQBP1,PQBP1,TIMM17B,PQBP1,PQBP1,PQBP1,TIMM17B,PQBP1,PQBP1,PQBP1,PQBP1	163,7,101,7,7,163,101,7,-13,7,399
chr19:14143203-14143540	chr19	+	14143209	14143335	True	NM_004843,NM_002918,NM_080864	chr19,chr19,chr19	+,-,+	IL27RA,RFX1,RLN3	-998,-26075,-4243
chr2:124783617-124783826	chr2	+	124783700	124783874	True	NM_032390,NM_130773	chr2,chr2	-,+	MKI67IP,CNTNAP5	-2289197,-887
chr7:135432796-135433734	chr7	+	135433019	135433749	True	NM_205855,NM_001130929	chr7,chr7	-,+	FAM180A,PL-5283	89,-85849
chr19:44488581-44488898	chr19	+	44488616	44488888	True	NM_003445,NM_198089,NM_003425	chr19,chr19,chr19	+,+,-	ZNF155,ZNF155,ZNF45	-313,-313,-49205
chr13:33112129-33112473	chr13	+	33112280	33112516	True	NM_014887,NM_015032,NM_033111	chr13,chr13,chr13	-,+,-	N4BP2L2,PDS5B,N4BP2L2	466,48047,470
chr5:173157886-173158173	chr5	+	173157887	173158125	True	NR_027109,NM_138369	chr5,chr5	+,-	LOC285593,BOD1	-151281,-114221
chr19:46526842-46527469	chr19	+	46526880	46527437	True	NR_030412,NM_005091	chr19,chr19	+,-	MIR769,PGLYRP1	-4741,-324
chr19:41257058-41257404	chr19	+	41257074	41257420	True	NM_198476,NM_004596	chr19,chr19	-,+	C19orf54,SNRPA	-1246,-366
chr9:91148681-91149054	chr9	+	91148698	91149016	True	NM_001161625,NM_145283,NM_001100111	chr9,chr9,chr9	+,+,-	NXNL2,NXNL2,LOC286238	999,999,118109
chr16:31100903-31102493	chr16	+	31101271	31102531	True	NM_024006,NM_001039503,NM_014699,NM_206824	chr16,chr16,chr16,chr16	-,-,+,-	VKORC1,PRSS53,ZNF646,VKORC1	3795,-1141,-15592,3795
chr18:72164107-72164428	chr18	+	72164174	72164424	True	NM_001168499,NM_001044369,NM_018235	chr18,chr18,chr18	+,-,+	CNDP2,FAM69C,CNDP2	2398,-39671,-725
chr10:35424407-35424996	chr10	+	35424456	35425038	True	NM_182850,NM_182853,NM_181571,NM_183060,NM_183013,NM_001198777,NM_183012,NM_001881,NM_183011	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,-,+,+,+	CREM,CREM,CREM,CREM,CREM,CUL2,CREM,CREM,CREM	-8716,-8716,-8129,-8129,-8716,-44886,1671,-8716,1671
chr3:153838928-153839181	chr3	+	153838940	153839128	True	NR_037901,NM_015595	chr3,chr3	-,+	LOC100507524,ARHGEF26	-3,20
chr2:102767737-102768819	chr2	+	102767769	102768619	True	NM_000877,NM_032718	chr2,chr2	+,-	IL1R1,MFSD9	1782,584768
chr6:125605955-125607114	chr6	+	125606535	125607144	True	NM_016063,NM_001003395	chr6,chr6	-,+	HDDC2,TPD52L1	16195,-131169
chr11:59577868-59578143	chr11	+	59577924	59578093	True	NM_004177,NM_017840	chr11,chr11	+,-	STX3,MRPL16	-55443,302
chr6:146950313-146951295	chr6	+	146950336	146950882	True	NM_024694,NR_003954	chr6,chr6	+,-	C6orf103,LOC729176	-30258,174144
chr9:75142233-75143341	chr9	+	75142332	75142880	True	NM_138691,NM_006007	chr9,chr9	+,-	TMC1,ZFAND5	-5666,-162169
chr21:15556417-15558055	chr21	+	15556953	15557932	True	NM_144770,NM_198996	chr21,chr21	+,-	RBM11,LIPI	30533,21379
chr14:50319515-50320444	chr14	+	50319575	50320337	True	NM_004713,NM_001663	chr14,chr14	-,+	NEMF,ARF6	-36,39398
chr7:44646674-44647459	chr7	+	44646684	44647239	True	NM_182547,NM_001003941,NM_001165036,NM_002541	chr7,chr7,chr7,chr7	-,+,+,+	TMED4,OGDH,OGDH,OGDH	-24857,-614,-614,-614
chr19:3557090-3557375	chr19	+	3557141	3557329	True	NM_001042680,NM_021731,NM_006339,NM_174983	chr19,chr19,chr19,chr19	-,-,+,-	C19orf28,C19orf28,HMG20B,C19orf28	292,292,15613,292
chr21:19190924-19191174	chr21	+	19190954	19191172	True	NM_001204175,NM_001100420,NM_001100421,NM_017447	chr21,chr21,chr21,chr21	+,-,-,-	CHODL,C21orf91,C21orf91,C21orf91	98484,581,581,581
chr1:149195520-149196922	chr1	+	149195597	149196550	True	NM_001024599,NR_027002	chr1,chr1	-,+	HIST2H2BF,LOC388692	202736,82925
chr22:41940501-41940853	chr22	+	41940657	41940881	True	NM_001018050,NM_001018052,NM_014460,NM_138338	chr22,chr22,chr22,chr22	-,-,+,-	POLR3H,POLR3H,CSDC2,POLR3H	-178,-178,16132,-181
chr5:59189482-59189692	chr5	+	59189558	59189688	True	NR_024617,NM_001104631	chr5,chr5	+,-	PART1,PDE4D	593851,-17
chr17:45332137-45332503	chr17	+	45332140	45332327	True	NM_000212,NM_001256	chr17,chr17	+,-	ITGB3,CDC27	-983,-65475
chr12:323184-323485	chr12	+	323199	323433	True	NM_001122848,NM_015232,NM_003044,NM_001122847	chr12,chr12,chr12,chr12	-,+,-,-	SLC6A12,IQSEC3,SLC6A12,SLC6A12	-2,-136708,-707,-365
chr2:40737259-40737712	chr2	+	40737360	40737742	True	NM_001112802,NM_152390	chr2,chr2	-,+	SLC8A1,TMEM178	1891,-844388
chr6:137114345-137114708	chr6	+	137114419	137114735	True	NM_000288,NM_005923	chr6,chr6	+,-	PEX7,MAP3K5	28966,-763
chr12:25149537-25150131	chr12	+	25149583	25150123	True	NM_001101339,NM_001204126	chr12,chr12	-,+	C12orf77,LRMP	307,55057
chr7:99957568-99958851	chr7	+	99957854	99958899	True	NM_178238,NR_003613	chr7,chr7	+,-	PILRB,PMS2P1	-2280,-23924
chr11:8284361-8284636	chr11	+	8284431	8284573	True	NM_002315,NM_177972	chr11,chr11	-,+	LMO1,TUB	883,-181573
chr12:64615600-64615980	chr12	+	64615651	64615957	True	NM_007235,NM_152440	chr12,chr12	+,-	XPOT,C12orf66	182195,169
chr8:106366046-106367104	chr8	+	106366174	106366805	True	NM_013437,NM_012082	chr8,chr8	-,+	LRP12,ZFPM2	-764922,-35078
chr16:30206139-30206446	chr16	+	30206187	30206391	True	NM_177552,NR_037608,NR_037609,NM_001017390,NM_001014999,NM_001015000,NM_024044,NM_001031827,NR_002454,NM_001039182,NM_178044	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,+,+,-,+,-,+	SULT1A3,SLX1A-SULT1A3,SLX1B-SULT1A4,SULT1A4,SLX1A,SLX1A,SLX1B,BOLA2,LOC606724,BOLA2B,SLX1B	4157,-484,-484,4157,-1074,-1074,-1074,-560,-6233,-560,-1074
chr16:30206139-30206446	chr16	+	29466845	29467049	False	NM_177552,NR_037608,NR_037609,NM_001017390,NM_001014999,NM_001015000,NM_024044,NM_001031827,NR_002454,NM_001039182,NM_178044	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,+,+,-,+,-,+	SULT1A3,SLX1A-SULT1A3,SLX1B-SULT1A4,SULT1A4,SLX1A,SLX1A,SLX1B,BOLA2,LOC606724,BOLA2B,SLX1B	4157,-484,-484,4157,-1074,-1074,-1074,-560,-6230,-560,-1074
chr10:135438797-135439752	chr10	+	135438880	135439450	True	NM_001127386	chr10	+	DUX4L2	40917
chr10:135438797-135439752	chr4	+	190947179	190947236	False	NM_012147,NM_001005217	chr4,chr4	+,-	DUX2,FRG2	41630,1229
chr19:51628416-51628629	chr19	+	51628430	51628666	True	NM_145232,NM_001198558,NM_014441	chr19,chr19,chr19	-,+,+	CTU1,SIGLEC9,SIGLEC9	-16783,-344,-344
chr18:3013531-3013733	chr18	+	3013541	3013607	True	NM_014646,NM_032048	chr18,chr18	-,+	LPIN2,EMILIN2	-1596,-166564
chr1:40099858-40101042	chr1	+	40100470	40101080	True	NM_014571,NM_203456	chr1,chr1	-,+	HEYL,PPIE	4318,103436
chr22:31502060-31502700	chr22	+	31502065	31502749	True	NM_080430,NM_001002837	chr22,chr22	-,+	SELM,INPP5J	852,16211
chr3:170734934-170736715	chr3	+	170734934	170736732	True	NM_000340,NM_001185056	chr3,chr3	-,+	SLC2A2,CLDN11	8086,-595958
chr5:121188318-121189692	chr5	+	121188323	121189528	True	NM_001178102,NM_177478	chr5,chr5	-,+	LOX,FTMT	223453,-724
chr1:161059704-161060975	chr1	+	161059870	161061015	True	NR_033386,NR_033385,NM_030916,NM_001007255,NM_152366	chr1,chr1,chr1,chr1,chr1	+,+,-,+,+	KLHDC9,KLHDC9,PVRL4,KLHDC9,KLHDC9	7135,7135,-485,7165,7165
chr17:36610411-36610934	chr17	+	36610441	36610967	True	NM_001004334,NM_001199417	chr17,chr17	-,+	GPR179,ARHGAP23	-110748,-25772
chr9:15552229-15552590	chr9	+	15552357	15552579	True	NM_173550,NM_033222	chr9,chr9	+,-	C9orf93,PSIP1	517,-41354
chr1:147441006-147442447	chr1	+	147441078	147442389	True	NR_003377,NM_001097616	chr1,chr1	-,+	PDZK1P1,GPR89C	41999,-15569
chr1:147441006-147442447	chr1	-	145788210	145788883	False	NM_001097612,NM_002614	chr1,chr1	-,+	GPR89A,PDZK1	38277,-60601
chr1:147441006-147442447	chr1	+	145899377	145900688	False	NR_003377,NM_001097616	chr1,chr1	-,+	PDZK1P1,GPR89C	41988,-15567
chr8:37405798-37406757	chr8	+	37406163	37406803	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	146497,198811
chr6:55688414-55688814	chr6	+	55688475	55688861	True	NM_021073,NM_207410	chr6,chr6	-,+	BMP5,GFRAL	51564,-496259
chr8:144800224-144800425	chr8	+	144800275	144800471	True	NM_001162914,NM_139021	chr8,chr8	-,+	LOC100130274,MAPK15	-9996,-1819
chr10:27540676-27540891	chr10	+	27540731	27540873	True	NR_003525,NM_032844,NR_024150,NM_001042473	chr10,chr10,chr10,chr10	-,+,-,-	LOC387646,MASTL,ACBD5,ACBD5	412,-97029,-9663,-9663
chr12:54392914-54393685	chr12	+	54393012	54393497	True	NR_029617,NM_006897,NM_022658,NR_003716	chr12,chr12,chr12,chr12	+,+,+,-	MIR196A2,HOXC9,HOXC8,HOTAIR	-7550,379,9392,-30497
chr10:18097617-18098006	chr10	+	18097622	18098044	True	NM_002438,NM_014241,NM_001009567	chr10,chr10,chr10	+,-,+	MRC1,PTPLA,MRC1L1	307,-438249,307
chr10:18097617-18098006	chr10	+	17850632	17851054	False	NM_002438,NM_014241,NM_001009567	chr10,chr10,chr10	+,-,+	MRC1,PTPLA,MRC1L1	307,-191259,307
chr22:26913431-26915164	chr22	+	26913443	26914612	True	NM_001013694,NM_001008697,NM_012143	chr22,chr22,chr22	+,-,-	SRRD,TFIP11,TFIP11	-33648,-5006,-5006
chr19:36305605-36306362	chr19	+	36305810	36305885	True	NM_052948,NM_021232	chr19,chr19	+,-	ARHGAP33,PRODH2	-39444,-1609
chr6:10560616-10561283	chr6	+	10560662	10561302	True	NR_027793,NM_001491	chr6,chr6	-,+	C6orf218,GCNT2	-125607,-4765
chr6:29911586-29911800	chr6	+	29911698	29911762	True	NR_001317,NM_002116	chr6,chr6	-,+	HCG4P6,HLA-A	-18270,-1440
chr6:29911586-29911800	chr6_apd_hap1	+	1151585	1151649	False	NR_001317,NM_002116	chr6_apd_hap1,chr6_apd_hap1	-,+	HCG4P6,HLA-A	-16298,-1441
chr6:29911586-29911800	chr6_cox_hap2	+	1423450	1423514	False	NR_001317,NM_002116	chr6_cox_hap2,chr6_cox_hap2	-,+	HCG4P6,HLA-A	-16299,-1441
chr16:69759831-69760149	chr16	+	69759859	69760177	True	NM_001025433,NM_000903,NM_199423,NM_001025434	chr16,chr16,chr16,chr16	-,-,+,-	NQO1,NQO1,WWP2,NQO1	406,406,36096,406
chr17:8057191-8059135	chr17	+	8057379	8059130	True	NM_002616,NR_037447,NM_014232	chr17,chr17,chr17	-,+,-	PER1,MIR3676,VAMP2	-1626,31362,7213
chr11:57099678-57100074	chr11	+	57099688	57100086	True	NM_002559,NM_003146,NM_033396	chr11,chr11,chr11	+,-,-	P2RX3,SSRP1,TNKS1BP1	5862,3315,-7275
chr14:50231783-50233010	chr14	+	50231983	50232891	True	NM_001197331,NM_014315	chr14,chr14	-,+	POLE2,KLHDC2	-76885,1895
chr2:148597968-148599911	chr2	+	148598283	148599735	True	NM_001190882,NM_001616	chr2,chr2	-,+	ORC4,ACVR2A	178635,2834
chr11:22361399-22363096	chr11	+	22361398	22362795	True	NM_020346,NM_022725	chr11,chr11	+,-	SLC17A6,FANCF	-1782,284642
chr14:95581066-95582613	chr14	+	95581070	95582658	True	NR_015415,NM_001195573	chr14,chr14	+,-	FLJ45244,DICER1	41366,17239
chr5:95015309-95016446	chr5	+	95015375	95016478	True	NM_031952,NM_173362	chr5,chr5	-,+	SPATA9,RFESD	2286,-32843
chr12:54453879-54454148	chr12	+	54453889	54454147	True	NM_153633,NR_026655,NR_026658	chr12,chr12,chr12	+,+,-	HOXC4,FLJ12825,LOC100240735	-6279,-1902,21510
chr17:27502999-27503563	chr17	+	27503083	27503461	True	NM_203318,NM_005208,NM_078471	chr17,chr17,chr17	-,+,-	MYO18A,CRYBA1,MYO18A	3997,70413,3997
chr1:11025118-11026813	chr1	+	11025177	11026735	True	NM_007375,NM_001170754	chr1,chr1	+,-	TARDBP,C1orf127	45943,15409
chr20:35506584-35506838	chr20	+	35506612	35506680	True	NM_080628,NM_080627	chr20,chr20	+,-	C20orf118,KIAA0889	-2093,-14525
chr6:154682399-154683284	chr6	+	154682440	154683328	True	NM_015553,NM_001130700,NM_001145287	chr6,chr6,chr6	-,-,+	IPCEF1,IPCEF1,OPRM1	-4540,-4540,-274855
chr7:6592868-6594355	chr7	+	6592973	6594309	True	NM_001134387,NM_001145118	chr7,chr7	+,-	ZDHHC4,GRID2IP	22755,-1906
chr19:33181570-33182780	chr19	+	33182077	33182555	True	NM_001105570,NM_032139	chr19,chr19	+,-	NUDT19,ANKRD27	311,-15975
chr17:48242014-48243377	chr17	+	48242216	48243278	True	NR_024192,NR_024193,NM_001135697,NM_000023	chr17,chr17,chr17,chr17	-,-,+,+	HILS1,HILS1,SGCA,SGCA	6609,6609,87,87
chr20:43935608-43935987	chr20	+	43935686	43936004	True	NM_003833,NM_030592,NM_030590,NM_014276	chr20,chr20,chr20,chr20	-,-,-,+	MATN4,MATN4,MATN4,RBPJL	1013,1013,1013,-246
chrX:20159995-20160250	chrX	+	20160012	20160298	True	NR_023358,NM_001173456,NM_001412	chrX,chrX,chrX	-,+,-	SCARNA9L,PDHA1,EIF1AX	-5481,-798052,-46
chr11:58874012-58874363	chr11	+	58874092	58874362	True	NM_001142704,NR_033853,NM_001142703,NM_198947	chr11,chr11,chr11,chr11	+,-,+,+	FAM111B,LOC283194,FAM111B,FAM111B	295,-48167,295,295
chr21:15053834-15054135	chr21	+	15053957	15054181	True	NR_026755,NM_174981	chr21,chr21	-,+	C21orf15,POTED	166554,-71510
chr18:656726-657467	chr18	+	657215	657441	True	NM_001071,NM_001012716	chr18,chr18	+,-	TYMS,C18orf56	162,949
chr3:20049182-20049613	chr3	+	20049310	20049638	True	NM_003884,NR_027694	chr3,chr3	+,-	KAT2B,C3orf48	31885,4177
chr11:60870667-60870930	chr11	+	60870701	60870909	True	NM_017966,NM_014207	chr11,chr11	-,+	VPS37C,CD5	58057,-822
chr5:14666735-14667695	chr5	+	14666911	14667449	True	NM_138348,NR_037899	chr5,chr5	+,-	FAM105B,LOC100128508	-2179,109742
chr2:219646570-219646817	chr2	+	219646715	219646861	True	NM_000784,NM_017431	chr2,chr2	+,-	CYP27A1,PRKAG3	-294,49701
chr19:30157332-30157780	chr19	+	30157494	30157816	True	NM_001031726,NM_024310	chr19,chr19	-,+	C19orf12,PLEKHF1	48197,-1218
chr1:26393850-26394076	chr1	+	26393854	26394104	True	NR_026685,NM_032588	chr1,chr1	+,-	PDIK1L,TRIM63	43551,67
chr12:57912736-57913509	chr12	+	57912817	57913551	True	NM_001195055,NM_052897,NM_001195053,NM_004083,NM_001195054,NM_001195057,NM_001195056	chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,+,-,-,-,-,-	DDIT3,MBD6,DDIT3,DDIT3,DDIT3,DDIT3,DDIT3	799,3107,799,799,799,799,799
chr6:25848908-25849712	chr6	+	25849312	25849750	True	NM_005074,NM_005495	chr6,chr6	-,+	SLC17A1,SLC17A4	-17025,-94443
chr19:53288795-53289507	chr19	+	53288830	53289388	True	NM_198457,NR_023311	chr19,chr19	-,+	ZNF600,ZNF137P	696,-188955
chr16:29467104-29467759	chr16	+	29467223	29467439	True	NM_177552,NR_037608,NR_037609,NM_001017390,NM_001014999,NM_001015000,NM_024044,NM_001031827,NR_002454,NM_001039182,NM_178044	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,+,+,-,+,-,+	SULT1A3,SLX1A-SULT1A3,SLX1B-SULT1A4,SULT1A4,SLX1A,SLX1A,SLX1B,BOLA2,LOC606724,BOLA2B,SLX1B	3767,-862,-862,3767,-1452,-1452,-1452,-938,-6608,-938,-1452
chr16:29467104-29467759	chr16	+	30206565	30206781	False	NM_177552,NR_037608,NR_037609,NM_001017390,NM_001014999,NM_001015000,NM_024044,NM_001031827,NR_002454,NM_001039182,NM_178044	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,+,+,-,+,-,+	SULT1A3,SLX1A-SULT1A3,SLX1B-SULT1A4,SULT1A4,SLX1A,SLX1A,SLX1B,BOLA2,LOC606724,BOLA2B,SLX1B	3767,-862,-862,3767,-1452,-1452,-1452,-938,-6611,-938,-1452
chr8:146228553-146228880	chr8	+	146228625	146228837	True	NR_002807,NR_026974	chr8,chr8	+,+	TMED10P1,C8orf77	-8425,-479
chr20:61733424-61733712	chr20	+	61733448	61733644	True	NR_003245,NR_003244	chr20,chr20	-,+	HAR1B,HAR1A	77,-855
chr13:19793749-19794974	chr13	+	19793847	19794593	True	NM_006001,NR_034026	chr13,chr13	-,+	TUBA3C,LOC100287114	-37855,124595
chr11:47586265-47586779	chr11	+	47586367	47586663	True	NM_001143984,NM_175732,NM_006560	chr11,chr11,chr11	+,+,-	PTPMT1,PTPMT1,CELF1	318,318,-11575
chr10:135170150-135170445	chr10	+	135170149	135170469	True	NM_001145201,NM_145202,NM_001098483,NM_198472	chr10,chr10,chr10,chr10	+,+,-,-	PRAP1,PRAP1,C10orf125,C10orf125	-9356,-9356,1110,1110
chr5:139174205-139174913	chr5	+	139174209	139174513	True	NM_032289,NM_001184935	chr5,chr5	+,-	PSD2,NRG2	892,248421
chr1:209756370-209757319	chr1	+	209756449	209757306	True	NM_020439,NR_036213	chr1,chr1	+,-	CAMK1G,MIR4260	-34,39601
chr8:101163515-101165086	chr8	+	101163587	101164975	True	NM_172218,NM_003114,NM_001029860,NM_005034,NR_036491	chr8,chr8,chr8,chr8,chr8	+,+,-,+,-	SPAG1,SPAG1,FBXO43,POLR2K,FBXO43	5287,5587,-5488,-800,-5488
chr2:70995605-70997459	chr2	+	70995720	70997096	True	NM_017482,NM_001617,NM_017488,NM_001185054,NM_001185055,NM_012476	chr2,chr2,chr2,chr2,chr2,chr2	-,-,-,-,-,+	ADD2,ADD2,ADD2,ADD2,ADD2,VAX2	-345,-345,-345,-873,-345,130623
chr3:138315954-138316632	chr3	+	138316166	138316281	True	NM_001033030,NM_024491	chr3,chr3	+,-	FAIM,CEP70	11260,-3037
chr22:35858085-35860002	chr22	+	35858275	35860027	True	NM_005368,NM_006739	chr22,chr22	-,+	MB,MCM5	153407,-62210
chr18:12253857-12254118	chr18	+	12253986	12254056	True	NR_036468,NM_006796,NM_001279	chr18,chr18,chr18	+,-,+	CIDEA,AFG3L2,CIDEA	303,123269,261
chr1:12679245-12679839	chr1	+	12679288	12679888	True	NM_004753,NM_001013630	chr1,chr1	-,+	DHRS3,AADACL4	-1468,24677
chr9:65632016-65633594	chr9	+	65632536	65633006	True	NR_024496,NM_015667	chr9,chr9	+,-	LOC442421,FAM75A7	861262,-122926
chr9:65632016-65633594	chr9	+	43891356	43891406	False	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	-260626,-206522
chr15:40206101-40206673	chr15	+	40206273	40206512	True	NM_007223,NM_001013703	chr15,chr15	-,+	GPR176,EIF2AK4	6640,19834
chr11:77733894-77734220	chr11	+	77733903	77734073	True	NM_023930,NM_003251	chr11,chr11	-,+	KCTD14,THRSP	297,40833
chr10:12109070-12110154	chr10	+	12109319	12109660	True	NM_018706,NM_080599	chr10,chr10	+,-	DHTKD1,UPF2	1273,-24296
chr15:35839104-35840496	chr15	+	35839231	35840379	True	NM_080650,NM_001141972,NR_003144	chr15,chr15,chr15	-,-,+	ATPBD4,ATPBD4,LOC723972	-827,-827,-309762
chr14:24737945-24738158	chr14	+	24737985	24738187	True	NM_000359,NM_004581,NM_182836,NM_174913	chr14,chr14,chr14,chr14	-,-,-,+	TGM1,RABGGTA,RABGGTA,C14orf21	-5569,2606,2666,30910
chr5:60669296-60670038	chr5	+	60669327	60669947	True	NM_001048249,NM_020928	chr5,chr5	-,+	C5orf43,ZSWIM6	-211025,-41280
chr19:58483132-58484438	chr19	+	58483200	58484218	True	NR_036508,NM_152474	chr19,chr19	+,-	LOC100128398,C19orf18	30043,1734
chr2:241076022-241076237	chr2	+	241076030	241076110	True	NM_001163424,NM_148961,NM_138336,NM_002081	chr2,chr2,chr2,chr2	-,-,-,+	MYEOV2,OTOS,MYEOV2,GPC1	-283,4013,-266,299004
chr10:74649510-74649884	chr10	+	74649518	74649836	True	NM_152635,NM_032562	chr10,chr10	+,-	OIT3,PLA2G12B	3502,64724
chr8:11996595-11997454	chr8	+	11996744	11996990	True	NM_201402,NR_003275,NR_027425	chr8,chr8,chr8	-,-,+	USP17L2,LOC392196,FAM66D	-475,-9940,-23504
chr1:149860659-149861015	chr1	+	149860665	149860872	True	NM_175065,NM_003528,NM_003517	chr1,chr1,chr1	-,-,+	HIST2H2AB,HIST2H2BE,HIST2H2AC	-1199,-2433,-2191
chr3:32828770-32829515	chr3	+	32828993	32829341	True	NM_016141,NM_001039111	chr3,chr3	-,+	DYNC1LI1,TRIM71	-216627,30168
chr11:1784444-1784815	chr11	+	1784521	1784789	True	NM_001909,NM_001012416,NM_053005	chr11,chr11,chr11	-,+,-	CTSD,KRTAP5-6,MOB2	483,-66147,762
chr2:33166092-33166940	chr2	+	33166246	33166777	True	NM_206943,NM_015475	chr2,chr2	+,-	LTBP1,FAM98A	5591,657635
chr17:5486766-5487284	chr17	+	5487093	5487247	True	NM_014922,NM_024039,NM_033004,NM_033007,NM_033006,NM_001033053	chr17,chr17,chr17,chr17,chr17,chr17	-,+,-,-,-,-	NLRP1,MIS12,NLRP1,NLRP1,NLRP1,NLRP1	635,-96897,635,635,635,635
chr11:33260702-33261166	chr11	+	33260781	33260874	True	NM_001033506,NM_001048200	chr11,chr11	-,+	CSTF3,HIPK3	-77744,18293
chr17:72986338-72987532	chr17	+	72986446	72987172	True	NM_014603,NM_030630	chr17,chr17	+,-	CDR2L,C17orf28	-2770,-17546
chr1:101192437-101193701	chr1	+	101192921	101193687	True	NM_001078,NM_080682,NM_001033025,NM_001199834	chr1,chr1,chr1,chr1	+,+,-,+	VCAM1,VCAM1,EXTL2,VCAM1	-7783,-7783,166781,-7783
chr5:83679136-83679604	chr5	+	83679205	83679630	True	NM_005711,NM_004385	chr5,chr5	-,+	EDIL3,VCAN	1031,-911763
chr9:127703512-127703712	chr9	+	127703524	127703614	True	NM_030978,NM_002077	chr9,chr9	+,-	ARPC5L,GOLGA1	-72091,-138
chr3:49761876-49763457	chr3	+	49762065	49763425	True	NM_013334,NM_198722,NM_021971,NM_022064	chr3,chr3,chr3,chr3	-,-,-,+	GMPPB,AMIGO3,GMPPB,RNF123	-681,-4827,-681,-35126
chr21:31538752-31540421	chr21	+	31538951	31540456	True	NM_012131,NM_181599	chr21,chr21	-,+	CLDN17,KRTAP13-1	20,227935
chr17:28905338-28906780	chr17	+	28905384	28906817	True	NM_206832,NR_015341,NM_015986	chr17,chr17,chr17	-,+,-	TMIGD1,LRRC37BP1,CRLF3	-244319,-1952,245011
chr3:4345984-4347063	chr3	+	4346133	4346439	True	NR_024022,NM_001164674,NM_006515	chr3,chr3,chr3	+,-,+	SETMAR,SUMF1,SETMAR	-887,162589,-1196
chr19:40022614-40023120	chr19	+	40022784	40023162	True	NM_152361,NM_153232,NM_182704	chr19,chr19,chr19	-,-,+	EID2B,EID2,SELV	382,7726,-17082
chr17:27541252-27541929	chr17	+	27541313	27541927	True	NM_203318,NM_005208	chr17,chr17	-,+	MYO18A,CRYBA1	-33906,31947
chr20:978549-979168	chr20	+	978647	979183	True	NM_001040007,NM_001029871,NM_178578	chr20,chr20,chr20	-,-,+	RSPO4,RSPO4,PSMF1	3774,3774,114722
chr8:25312461-25313216	chr8	+	25312877	25313265	True	NM_017634,NM_152562	chr8,chr8	-,+	KCTD9,CDCA2	2771,3247
chr8:67059884-67061003	chr8	+	67060070	67060910	True	NM_000756,NM_184087	chr8,chr8	-,+	CRH,TRIM55	29996,-20843
chr11:76468477-76468781	chr11	+	76468497	76468781	True	NM_015516,NR_024042	chr11,chr11	+,-	TSKU,GUCY2E	25503,-35664
chr19:54387748-54388777	chr19	+	54387814	54388467	True	NM_144687,NM_002739	chr19,chr19	-,+	NLRP12,PRKCG	-60166,-2398
chr1:26737355-26737691	chr1	+	26737381	26737679	True	NM_173574,NM_024674	chr1,chr1	-,+	ZNF683,LIN28A	-38115,-163
chr4:185397959-185398998	chr4	+	185397981	185398907	True	NM_002199,NM_152683	chr4,chr4	-,+	IRF2,CCDC111	-2255,171859
chr17:53497731-53498086	chr17	+	53497752	53498129	True	NM_002126,NM_012329	chr17,chr17	+,-	HLF,MMD	-155489,1262
chrX:15581348-15582331	chrX	+	15581721	15582347	True	NM_001721,NM_021804	chrX,chrX	+,-	BMX,ACE2	-56341,37895
chr10:124784240-124784902	chr10	+	124784333	124784698	True	NM_001609,NM_022466	chr10,chr10	+,-	ACADSB,IKZF5	-15964,-16022
chrX:55028405-55028813	chrX	+	55028519	55028833	True	NM_002625,NM_014481	chrX,chrX	-,+	PFKFB1,APEX2	-8008,-1791
chr6:13712481-13712742	chr6	+	13712566	13712757	True	NM_005493,NM_016167	chr6,chr6	-,+	RANBP9,NOL7	-770,-97065
chr19:39443869-39445202	chr19	+	39444343	39444876	True	NM_148169,NM_033363	chr19,chr19	-,+	FBXO17,MRPS12	-1016,-22800
chr19:58991288-58991510	chr19	+	58991342	58991528	True	NM_012254,NM_017908	chr19,chr19	-,+	SLC27A5,ZNF446	31954,-3598
chr2:98262664-98262872	chr2	+	98262705	98262889	True	NM_001862,NM_005735	chr2,chr2	+,-	COX5B,ACTR1B	-235,17722
chr7:80542522-80543245	chr7	+	80542823	80543269	True	NM_006379,NM_001127444	chr7,chr7	-,+	SEMA3C,CD36	5450,-267125
chr1:226409404-226410214	chr1	+	226410047	226410239	True	NM_022735,NM_031944	chr1,chr1	-,+	ACBD3,MIXL1	-35624,1143
chr9:6646914-6647747	chr9	+	6647022	6647688	True	NM_000170,NM_001146696	chr9,chr9	-,+	GLDC,KDM4C	-1330,73174
chr17:72969624-72970970	chr17	+	72969914	72970986	True	NM_014603,NM_030630	chr17,chr17	+,-	CDR2L,C17orf28	12740,-1014
chr17:74728647-74730462	chr17	+	74728775	74730479	True	NR_036608,NM_001080510,NR_030366,NM_001081461,NM_003016,NM_024311,NM_001195427,NM_015167	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,-,-,-,+,-,-	SRSF2,METTL23,MIR636,JMJD6,SRSF2,MFSD11,SRSF2,JMJD6	3064,-5887,2201,-5894,3064,3303,3064,-5894
chr13:96636790-96638014	chr13	+	96637213	96638033	True	NM_153456,NM_020121	chr13,chr13	+,-	HS6ST3,UGGT2	105059,67754
chr12:50215614-50216787	chr12	+	50215614	50216736	True	NM_001037806,NR_027500,NR_027501,NR_027499	chr12,chr12,chr12,chr12	-,+,+,+	NCKAP5L,LOC100286844,LOC100286844,LOC100286844	5523,5589,5589,5589
chr13:113241105-113241922	chr13	+	113241161	113241745	True	NM_207440,NM_006322	chr13,chr13	+,-	C13orf35,TUBGCP3	59612,786
chr2:33822317-33824097	chr2	+	33822683	33824015	True	NM_015475,NM_015376	chr2,chr2	-,+	FAM98A,RASGRP3	397,-83792
chr19:4342793-4343052	chr19	+	4342825	4342981	True	NM_001159846,NM_001013841,NM_032868,NM_017720	chr19,chr19,chr19,chr19	+,-,+,-	MPND,STAP2,MPND,STAP2	542,-3978,542,-3978
chrX:153168370-153169116	chrX	+	153168429	153168903	True	NM_001164741,NM_001146151,NM_000054,NR_027419	chrX,chrX,chrX,chrX	-,+,+,+	ARHGAP4,AVPR2,AVPR2,AVPR2	22861,1625,1625,-495
chr7:97360662-97361162	chr7	+	97360798	97361198	True	NM_001178077,NM_013997,NM_013996,NM_003182,NM_013998	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	ASNS,TAC1,TAC1,TAC1,TAC1	140329,72,72,72,72
chrX:135056340-135057090	chrX	+	135056843	135057115	True	NM_173470,NM_001177651	chrX,chrX	-,+	MMGT1,SLC9A6	-709,10467
chr4:8872374-8872692	chr4	+	8872416	8872732	True	NM_018942,NM_001040071	chr4,chr4	-,+	HMX1,LOC650293	861,78744
chr13:51484857-51486538	chr13	+	51484897	51486411	True	NM_001142279,NM_024570,NM_198989	chr13,chr13,chr13	+,+,-	RNASEH2B,RNASEH2B,DLEU7	-1135,-1135,-67012
chr1:117903310-117905113	chr1	+	117903431	117905026	True	NM_006699,NM_024626	chr1,chr1	+,-	MAN1A2,VTCN1	5058,-149882
chr6:46577062-46578347	chr6	+	46577256	46578000	True	NM_016593,NM_001204051	chr6,chr6	-,+	CYP39A1,SLC25A27	42581,42651
chr18:11751261-11751626	chr18	+	11751304	11751584	True	NM_023075,NM_001142339,NM_002071	chr18,chr18,chr18	-,+,+	MPPE1,GNAL,GNAL	157107,-23,-23
chr3:62828414-62829873	chr3	+	62828556	62829888	True	NR_027104,NM_003716	chr3,chr3	+,-	LOC285401,CADPS	258475,31226
chr19:50647151-50648801	chr19	+	50647176	50648796	True	NM_001145809,NR_024243,NR_024231,NR_024230	chr19,chr19,chr19,chr19	+,-,-,-	MYH14,SNAR-D,SNAR-B1,SNAR-B2	58088,-3599,-4682,-4682
chr9:114248461-114249152	chr9	+	114248592	114249064	True	NM_001080398,NM_133464	chr9,chr9	-,+	KIAA0368,ZNF483	-1567,38382
chr2:20730559-20731238	chr2	+	20730564	20731280	True	NM_022460,NM_004040	chr2,chr2	-,+	HS1BP3,RHOB	119634,-83780
chr3:185266066-185266841	chr3	+	185266560	185266644	True	NM_021627,NM_139248	chr3,chr3	+,-	SENP2,LIPH	37386,3775
chr3:195873353-195873651	chr3	+	195873447	195873608	True	NR_034088,NM_001128148	chr3,chr3	+,-	LOC401109,TFRC	-4001,-64415
chr9:103340232-103340739	chr9	+	103340233	103340748	True	NM_017746,NM_001018116	chr9,chr9	-,+	TEX10,MURC	-224974,52
chr13:33158823-33159552	chr13	+	33159259	33159593	True	NM_033111,NM_015032	chr13,chr13	-,+	N4BP2L2,PDS5B	-46323,970
chr19:23950860-23951798	chr19	+	23950894	23951832	True	NM_138286,NR_003662	chr19,chr19	-,+	ZNF681,RPSAP58	-9201,-5136
chr18:30351266-30351483	chr18	+	30351269	30351460	True	NR_003558,NM_020805	chr18,chr18	+,-	WBP11P1,KLHL14	-259694,1565
chr19:15221484-15222085	chr19	+	15221500	15222001	True	NM_006844,NM_033025	chr19,chr19	-,+	ILVBL,SYDE1	14626,-3337
chr19:42929175-42929572	chr19	+	42929262	42929526	True	NM_001410,NM_005357	chr19,chr19	+,-	MEGF8,LIPE	-99552,2102
chr19:34396275-34396485	chr19	+	34396314	34396524	True	NM_001166057,NM_024076	chr19,chr19	-,+	PEPD,KCTD15	-383515,-108614
chr3:194393995-194394929	chr3	+	194394494	194394976	True	NM_018385,NM_153690	chr3,chr3	-,+	LSG1,FAM43A	-1288,11645
chr14:22105295-22106019	chr14	+	22105803	22106034	True	NM_001001912,NM_001005466	chr14,chr14	+,-	OR4E2,OR10G2	27262,-2805
chr5:140308279-140308944	chr5	+	140308308	140308974	True	NM_018898,NM_031882,NM_002109	chr5,chr5,chr5	+,+,-	PCDHAC1,PCDHAC1,HARS	-2057,-2057,-237337
chr11:129247711-129249418	chr11	+	129247845	129249350	True	NM_001142685,NM_003658	chr11,chr11	-,+	ARHGAP32,BARX2	-185752,-2015
chr8:21899101-21899360	chr8	+	21899130	21899378	True	NM_024815,NM_003867	chr8,chr8	-,+	NUDT18,FGF17	67604,1049
chr21:43736734-43737063	chr21	+	43736736	43736960	True	NM_003226,NM_001001895	chr21,chr21	-,+	TFF3,UBASH3A	-1030,87058
chr17:71639851-71640059	chr17	+	71640017	71640099	True	NM_001144952,NM_017941	chr17,chr17	-,+	SDK2,C17orf80	178,-411292
chr2:171674615-171674842	chr2	+	171674757	171674827	True	NM_013445,NM_000817,NR_027433	chr2,chr2,chr2	+,+,-	GAD1,GAD1,LOC440925	-1608,-1608,-103680
chr8:125986087-125987092	chr8	+	125986354	125986913	True	NM_014846,NM_152412	chr8,chr8	-,+	KIAA0196,ZNF572	117205,-868
chr8:146077693-146078037	chr8	+	146077702	146077998	True	NM_001081003,NM_001081004,NM_014066,NM_003416	chr8,chr8,chr8,chr8	-,-,-,+	COMMD5,COMMD5,COMMD5,ZNF7	984,503,504,-24850
chr5:173315404-173315774	chr5	+	173315533	173315607	True	NM_030627,NM_138369	chr5,chr5	+,-	CPEB4,BOD1	-253,-271867
chr3:160273860-160274829	chr3	+	160273984	160274877	True	NM_002268,NM_025047	chr3,chr3	-,+	KPNA4,ARL14	8549,120070
chr1:114446878-114447249	chr1	+	114446879	114447271	True	NM_022836,NM_006594	chr1,chr1	+,-	DCLRE1B,AP4B1	643,520
chr3:125591683-125592055	chr3	+	125591828	125591910	True	NM_001015050,NR_024250	chr3,chr3	-,+	ALG1L,LOC100125556	64027,43533
chr15:83239042-83240567	chr15	+	83239256	83240606	True	NM_001079535,NM_001079534,NM_001079533,NR_033579	chr15,chr15,chr15,chr15	-,-,-,+	CPEB1,CPEB1,CPEB1,LOC440297	17,17,17,-109274
chr10:123689101-123690631	chr10	+	123689193	123690653	True	NM_001001976,NM_206861,NM_007041	chr10,chr10,chr10	-,+,-	ATE1,TACC2,ATE1	-1647,58035,-1647
chr10:124028840-124029133	chr10	+	124028938	124029180	True	NM_017615,NM_144587	chr10,chr10	-,+	NSMCE4A,BTBD16	-294195,1640
chr12:113773143-113773535	chr12	+	113773151	113773345	True	NM_001159727,NM_024959	chr12,chr12	+,-	PLBD2,SLC24A6	23025,-226
chr3:46504379-46505584	chr3	+	46504796	46505632	True	NM_002343,NM_001199149,NM_031440	chr3,chr3,chr3	-,-,+	LTF,LTF,RTP3	1016,63,33852
chr16:88637643-88637866	chr16	+	88637646	88637904	True	NM_000101,NM_144604	chr16,chr16	-,+	CYBA,ZC3H18	79603,-910
chr19:9224283-9225309	chr19	+	9224300	9225060	True	NM_001005192,NM_001004456	chr19,chr19	-,+	OR7G1,OR1M1	1429,-20437
chr7:100809363-100809964	chr7	+	100809497	100809857	True	NM_003378,NM_001283	chr7,chr7	-,+	VGF,AP1S1	-645,-11862
chr1:157510987-157512510	chr1	+	157511036	157512496	True	NM_001195388,NM_031281,NR_001560	chr1,chr1,chr1	-,-,+	FCRL5,FCRL5,CYCSP52	9864,9864,-412933
chr2:55922148-55923000	chr2	+	55922495	55922892	True	NM_080667,NM_033109	chr2,chr2	+,-	CCDC104,PNPT1	-175819,-1484
chr5:76334568-76335974	chr5	+	76334915	76335839	True	NM_018046,NR_003014	chr5,chr5	+,-	AGGF1,SNORA47	-8770,40621
chr1:23351914-23352974	chr1	+	23352157	23352747	True	NM_001142546,NM_015013,NM_001009999	chr1,chr1,chr1	-,+,+	LUZP1,KDM1A,KDM1A	142659,-6276,-6276
chr16:74400769-74400974	chr16	+	74400781	74400977	True	NR_026950,NM_002811	chr16,chr16	-,+	LOC283922,PSMD7	1226,-70159
chr16:74400769-74400974	chr16	-	70149335	70149487	False	NM_017990,NR_003610	chr16,chr16	+,-	PDPR,PDXDC2P	-1863,-49484
chr19:1283101-1283483	chr19	+	1283108	1283512	True	NR_027271,NM_001405,NM_017914	chr19,chr19,chr19	-,+,+	C19orf23,EFNA2,C19orf24	-12849,2655,-7639
chr12:45444855-45445301	chr12	+	45444856	45445264	True	NM_001004329,NM_001025356	chr12,chr12	-,+	DBX2,ANO6	24,164505
chr16:85829683-85831165	chr16	+	85829698	85831212	True	NM_001142288,NM_001861,NM_006067	chr16,chr16,chr16	-,+,-	COX4NB,COX4I1,COX4NB	1994,1960,1994
chr2:120280913-120281559	chr2	+	120281074	120281544	True	NM_001029996,NM_002980	chr2,chr2	+,-	PCDP1,SCTR	20480,534
chr1:6053750-6054782	chr1	+	6053870	6054742	True	NM_001199861,NM_015102	chr1,chr1	+,-	KCNAB2,NPHP4	-1563,-1337
chr10:115311835-115313602	chr10	+	115312103	115313640	True	NM_006175,NM_004132,NM_001177660	chr10,chr10,chr10	-,+,+	NRAP,HABP2,HABP2	110215,-241,-1572
chr7:77044853-77045168	chr7	+	77045048	77045146	True	NM_002835,NM_017439	chr7,chr7	+,-	PTPN12,PION	121626,621
chr6:15080672-15080990	chr6	+	15080675	15080863	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	165663,582476
chr5:85914222-85914653	chr5	+	85914245	85914477	True	NR_036243,NM_001867,NR_037402	chr5,chr5,chr5	-,+,+	MIR4280,COX7C,MIR3607	496344,-512,1836
chr16:74401107-74401359	chr16	+	74401281	74401405	True	NR_026950,NM_002811	chr16,chr16	-,+	LOC283922,PSMD7	798,-70659
chr16:74401107-74401359	chr16	-	70148898	70148948	False	NM_017990,NR_003610	chr16,chr16	+,-	PDPR,PDXDC2P	-1420,-49047
chr19:49990434-49990657	chr19	+	49990523	49990705	True	NR_026712,NR_000020,NR_000021,NM_012423,NR_000019,NR_000018,NM_001015,NR_029703	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,+,+,-	RPL13AP5,SNORD33,SNORD32A,RPL13A,SNORD34,SNORD35A,RPS11,MIR150	159,3168,2517,159,3458,3726,8928,13470
chr1:76539184-76539640	chr1	+	76539307	76539656	True	NM_001160011,NM_152996,NR_026546	chr1,chr1,chr1	+,+,-	ST6GALNAC3,ST6GALNAC3,ASB17	732,732,-141191
chr10:4943169-4944112	chr10	+	4943285	4943685	True	NR_026743,NM_001353	chr10,chr10	-,+	tAKR,AKR1C1	14834,61768
chr7:56131781-56132009	chr7	+	56131782	56132022	True	NM_001130069,NM_004577,NM_001042469,NM_001146333,NM_015411,NR_002957,NM_001042470	chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,-,+,+,+,+,+	SUMF2,PSPH,SUMF2,SUMF2,SUMF2,SNORA15,SUMF2	48,-12514,48,48,48,-3670,48
chr9:32504530-32505395	chr9	+	32505091	32505450	True	NM_014314,NR_033991	chr9,chr9	-,+	DDX58,LOC100129250	20930,45691
chr14:99945080-99945985	chr14	+	99945119	99946026	True	NM_032233,NM_001099402,NM_199123	chr14,chr14,chr14	-,+,-	SETD3,CCNK,SETD3	1250,1712,1250
chr14:60076399-60077819	chr14	+	60076457	60077687	True	NM_016475,NM_206852	chr14,chr14	+,-	JKAMP,RTN1	-125354,19883
chr5:154317619-154317860	chr5	+	154317690	154317876	True	NM_001014990,NM_015465,NM_014180	chr5,chr5,chr5	+,-,+	MRPL22,GEMIN5,MRPL22	2756,-50,2756
chr7:21989672-21990863	chr7	+	21989689	21990639	True	NM_003777,NM_001127371,NM_001127370,NM_018719	chr7,chr7,chr7,chr7	+,-,-,-	DNAH11,CDCA7L,CDCA7L,CDCA7L	-406920,-4147,-4147,-4147
chr7:26447765-26448150	chr7	+	26447906	26448039	True	NR_022006,NR_015364	chr7,chr7	-,+	KIAA0087,LOC441204	130460,-4855
chr6:26273881-26274245	chr6	+	26274052	26274265	True	NM_003525,NM_003534	chr6,chr6	+,-	HIST1H2BI,HIST1H3G	-901,-2440
chr9:107363789-107364248	chr9	+	107363812	107364303	True	NM_001004483,NM_001004482,NM_001004481	chr9,chr9,chr9	+,-,-	OR13C8,OR13C5,OR13C2	-32422,-2118,3661
chr9:140147145-140147365	chr9	+	140147163	140147313	True	NM_001004353,NM_015456,NM_001001710	chr9,chr9,chr9	+,+,-	C9orf173,COBRA1,FAM166A	-1484,2445,-4941
chr10:48359217-48359426	chr10	+	48359222	48359344	True	NM_002900,NM_153034	chr10,chr10	-,+	RBP3,ZNF488	31697,-4184
chr3:129688463-129689126	chr3	+	129688606	129689020	True	NM_001128224,NM_007117	chr3,chr3	-,+	TMCC1,TRH	-76187,4093
chr3:71621926-71623470	chr3	+	71622109	71623492	True	NM_018971,NM_001012505,NM_032682	chr3,chr3,chr3	+,-,-	GPR27,FOXP1,FOXP1	179708,9703,9703
chr5:133701104-133702661	chr5	+	133701226	133702665	True	NM_016508,NM_003337,NM_001113575	chr5,chr5,chr5	-,+,-	CDKL3,UBE2B,CDKL3	150,4204,150
chr11:83383513-83384027	chr11	+	83383535	83383789	True	NM_182603,NM_001142702	chr11,chr11	+,-	ANKRD42,DLG2	-478307,9729
chr10:101491659-101491888	chr10	+	101491689	101491827	True	NM_015960,NM_078470,NM_004376	chr10,chr10,chr10	+,-,-	CUTC,COX15,COX15	130,646,646
chr9:35609534-35609838	chr9	+	35609624	35609838	True	NM_001782,NM_006285	chr9,chr9	-,+	CD72,TESK1	8636,-4394
chr6:38667878-38669797	chr6	+	38668024	38669698	True	NM_006708,NM_001371	chr6,chr6	-,+	GLO1,DNAH8	1311,20853
chr3:51980895-51981602	chr3	+	51980918	51981574	True	NM_080865,NM_005485,NM_001003931,NM_004704	chr3,chr3,chr3,chr3	+,+,+,-	GPR62,PARP3,PARP3,RRP9	7755,-4608,-4608,-4996
chr7:142722331-142723529	chr7	+	142722378	142723469	True	NM_001001667,NM_001001658	chr7,chr7	+,-	OR6V1,OR9A2	25968,801
chr5:140714208-140715091	chr5	+	140714207	140714759	True	NM_031993,NM_005642,NM_032009,NM_032011,NM_018915,NM_018916,NM_018912	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,-,+,+,+,+,+	PCDHGA1,TAF7,PCDHGA2,PCDHGA3,PCDHGA2,PCDHGA3,PCDHGA1	-4006,-13856,3594,8841,3594,8841,-4006
chr12:111394736-111395019	chr12	+	111394801	111395037	True	NM_000432,NR_036513	chr12,chr12	-,+	MYL2,LOC100131138	-36397,-20448
chr5:59827108-59827372	chr5	+	59827336	59827404	True	NR_028509,NM_001165899	chr5,chr5	+,-	PART1,PDE4D	-43628,-43411
chr22:42345623-42345828	chr22	+	42345687	42345875	True	NM_024053,NM_001002876,NR_024355,NM_001110215	chr22,chr22,chr22,chr22	-,-,+,-	CENPM,CENPM,LOC339674,CENPM	-2539,-2539,2315,-9464
chr19:40021026-40022106	chr19	+	40021258	40021795	True	NM_152361,NM_153232,NM_182704	chr19,chr19,chr19	-,-,+	EID2B,EID2,SELV	1750,9094,-15563
chr1:24192656-24193496	chr1	+	24192860	24193525	True	NM_000147,NM_007260	chr1,chr1	-,+	FUCA1,LYPLA2	1384,-75273
chr1:228195915-228196125	chr1	+	228196035	228196106	True	NM_033131,NM_003395	chr1,chr1	+,-	WNT3A,WNT9A	-1363,-60359
chr7:23525783-23526188	chr7	+	23525783	23526084	True	NM_006547,NR_026676	chr7,chr7	-,+	IGF2BP3,RPS2P32	-15788,3922
chr20:46415479-46415742	chr20	+	46415561	46415775	True	NM_018837,NM_198596,NM_181659,NM_001161841	chr20,chr20,chr20,chr20	-,-,+,-	SULF2,SULF2,NCOA3,SULF2	-753,-201,-285014,-201
chr17:40441153-40441366	chr17	+	40441244	40441412	True	NM_012448,NM_003152	chr17,chr17	-,+	STAT5B,STAT5A	-12820,-1730
chr3:194070621-194071834	chr3	+	194070847	194071690	True	NM_001080513,NR_033929	chr3,chr3	-,+	CPN2,FLJ34208	418,136178
chr12:51237498-51238278	chr12	+	51237542	51237929	True	NM_182559,NM_001174130	chr12,chr12	+,-	TMPRSS12,SLC11A2	-906,165187
chr4:15782585-15783881	chr4	+	15782837	15783897	True	NR_036464,NM_001775	chr4,chr4	-,+	FBXL5,CD38	-125802,-2960
chr1:222888109-222888769	chr1	+	222888316	222888771	True	NM_022831,NM_144695	chr1,chr1	-,+	AIDA,BROX	-2452,-2475
chr5:113797202-113798457	chr5	+	113797436	113798448	True	NM_170775,NM_018700	chr5,chr5	+,-	KCNN2,TRIM36	-28260,717845
chr3:49142349-49142699	chr3	+	49142413	49142681	True	NM_173546,NM_005051	chr3,chr3	+,-	KLHDC8B,QARS	66336,-242
chr6:49990516-49990864	chr6	+	49990515	49990712	True	NM_001037497,NM_001037728,NM_001145652	chr6,chr6,chr6	-,-,+	DEFB110,DEFB110,C6orf141	-821,-821,-472460
chrX:153047705-153048857	chrX	+	153047811	153048481	True	NM_014370,NM_001170760,NM_001170761,NM_004135	chrX,chrX,chrX,chrX	+,+,+,-	SRPK3,SRPK3,SRPK3,IDH3G	-1406,-1406,-1406,11536
chr3:182881908-182882999	chr3	+	182882378	182882996	True	NM_032047,NM_014398	chr3,chr3	+,-	B3GNT5,LAMP3	88035,-1711
chr1:100443801-100445080	chr1	+	100444138	100444929	True	NM_012243,NM_194292	chr1,chr1	+,-	SLC35A3,SASS6	-8654,153639
chr13:31489607-31490357	chr13	+	31489744	31490302	True	NM_006644,NM_032849	chr13,chr13	-,+	HSPH1,C13orf33	245865,-9483
chr17:45770810-45771106	chr17	+	45770833	45771112	True	NM_014726,NM_145798	chr17,chr17	+,-	TBKBP1,OSBPL7	1517,128086
chr4:74470900-74471995	chr4	+	74471007	74471918	True	NM_177532,NM_001133	chr4,chr4	-,+	RASSF6,AFM	14266,-123609
chr6:27787269-27788386	chr6	+	27787420	27788259	True	NM_003536,NM_021968,NM_021066,NM_003521	chr6,chr6,chr6,chr6	+,+,-,+	HIST1H3H,HIST1H4J,HIST1H2AJ,HIST1H2BM	-9629,3643,-4902,-4649
chrX:41545029-41545433	chrX	+	41545032	41545277	True	NM_005300,NM_001126054,NM_001097579	chrX,chrX,chrX	+,-,+	GPR34,CASK,GPR34	2948,237067,2948
chr15:59278257-59278507	chr15	+	59278269	59278369	True	NM_024755,NM_017610	chr15,chr15	-,+	SLTM,RNF111	-52417,1495
chr1:41132208-41133521	chr1	+	41132254	41133459	True	NM_001142587,NM_014747	chr1,chr1	+,-	NFYC,RIMS3	23782,-930
chr2:27580647-27581410	chr2	+	27580772	27581462	True	NM_001035521,NM_001521,NM_014748	chr2,chr2,chr2	-,-,+	GTF3C2,GTF3C2,SNX17	-904,-904,11926
chr6:36971910-36972183	chr6	+	36971985	36972217	True	NM_173558,NM_014341	chr6,chr6	+,-	FGD2,MTCH1	1205,-18036
chr3:154008144-154008643	chr3	+	154008442	154008649	True	NM_015595,NM_001114397	chr3,chr3	+,-	ARHGEF26,DHX36	-169357,33688
chr1:20251460-20252625	chr1	+	20252016	20252585	True	NM_015207,NM_014589	chr1,chr1	+,-	OTUD3,PLA2G2E	-43179,-1906
chr19:10196345-10196650	chr19	+	10196447	10196533	True	NM_018381,NM_031917	chr19,chr19	+,-	C19orf66,ANGPTL6	272,16942
chr5:76505867-76506183	chr5	+	76505941	76506091	True	NM_003719,NM_032367,NM_001029854,NM_001029851,NM_001029853,NM_001029852	chr5,chr5,chr5,chr5,chr5,chr5	+,-,+,+,+,+	PDE8B,ZBED3,PDE8B,PDE8B,PDE8B,PDE8B	614,-122911,614,614,614,614
chr2:11449323-11449960	chr2	+	11449452	11449837	True	NM_152391,NM_004850	chr2,chr2	+,-	PQLC3,ROCK2	-153963,34933
chr14:92979303-92979532	chr14	+	92979311	92979565	True	NM_001008530,NM_024832	chr14,chr14	-,+	LGMN,RIN3	235532,559
chr2:27886488-27886771	chr2	+	27886512	27886783	True	NM_014860,NM_018158	chr2,chr2	-,+	SUPT7L,SLC4A1AP	-63,-226
chr1:4717298-4717808	chr1	+	4717382	4717704	True	NM_018836,NM_001042478,NM_207356	chr1,chr1,chr1	+,+,-	AJAP1,AJAP1,C1orf174	-2329,-2329,-900525
chr10:127587922-127589096	chr10	+	127587958	127588904	True	NM_018180,NM_145235	chr10,chr10	-,+	DHX32,FANK1	-18074,-2902
chr3:64009259-64010001	chr3	+	64009333	64009842	True	NM_014814,NM_001128149	chr3,chr3	-,+	PSMD6,ATXN7	-213,-55964
chr22:41345682-41346351	chr22	+	41345894	41346074	True	NM_014248,NM_145174	chr22,chr22	+,-	RBX1,DNAJB7	1276,-87764
chr6:1176197-1177290	chr6	+	1176316	1177046	True	NR_027116,NM_033260	chr6,chr6	-,+	LOC285768,FOXQ1	-74749,135628
chr6:28364540-28364804	chr6	+	28364676	28364775	True	NM_024493,NM_001163391,NR_028077	chr6,chr6,chr6	+,-,-	ZKSCAN3,ZSCAN12,ZSCAN12	-47045,2832,2832
chr10:133995662-133995921	chr10	+	133995816	133995914	True	NM_006426,NM_173575	chr10,chr10	+,-	DPYSL4,STK32C	4499,125613
chr19:50179632-50179937	chr19	+	50179645	50179843	True	NM_001571,NM_198318,NM_001536,NR_033397	chr19,chr19,chr19,chr19	-,+,+,+	IRF3,PRMT1,PRMT1,PRMT1	-10513,652,652,652
chr3:193098846-193099369	chr3	+	193098877	193099407	True	NR_026877,NM_198505	chr3,chr3	+,-	MGC2889,ATP13A5	-139365,-2363
chr4:87797056-87797476	chr4	+	87797393	87797467	True	NM_144645,NM_001166693	chr4,chr4	-,+	C4orf36,AFF1	16158,58686
chr15:68351433-68351769	chr15	+	68351662	68351792	True	NM_016166,NM_001031733	chr15,chr15	+,-	PIAS1,CALML4	-5149,146706
chr2:48845734-48846821	chr2	+	48845921	48846865	True	NM_001193487,NM_000233,NM_006872	chr2,chr2,chr2	+,-,+	GTF2A1L,LHCGR,GTF2A1L	-1045,136066,-1045
chr14:60096891-60097113	chr14	+	60096891	60097142	True	NM_016475,NM_206852	chr14,chr14	+,-	JKAMP,RTN1	-145788,428
chr10:98481824-98482188	chr10	+	98481925	98482197	True	NM_152309,NM_001170765	chr10,chr10	-,+	PIK3AP1,LCOR	-1646,109819
chr10:105725615-105725897	chr10	+	105725617	105725893	True	NM_024928,NM_014720	chr10,chr10	-,+	OBFC1,SLK	-47572,1576
chr8:21914509-21914784	chr8	+	21914563	21914737	True	NM_001978,NM_024815,NM_001114135,NM_001114137,NM_001114136,NM_001114139,NM_001114138	chr8,chr8,chr8,chr8,chr8,chr8,chr8	+,-,+,+,+,+,+	EPB49,NUDT18,EPB49,EPB49,EPB49,EPB49,EPB49	1948,52245,638,-3533,-2286,-2286,1948
chr14:23058203-23058443	chr14	+	23058209	23058491	True	NM_022060,NM_001344	chr14,chr14	+,-	ABHD4,DAD1	8655,-66
chr16:187639-187844	chr16	+	187828	187899	True	NM_001039476,NM_001077350,NM_005332	chr16,chr16,chr16	-,-,+	NPRL3,NPRL3,HBZ	770,832,14954
chr20:2515341-2515802	chr20	+	2515402	2515644	True	NM_024325,NM_080751	chr20,chr20	-,+	ZNF343,TMC2	-25624,1608
chr2:176029184-176030847	chr2	+	176029476	176030887	True	NM_024583,NM_001880,NR_030630	chr2,chr2,chr2	+,-,-	SCRN3,ATF2,MIR933	-769078,2069,1609
chr1:227749814-227750119	chr1	+	227749816	227750052	True	NR_036753,NR_033184,NM_178549	chr1,chr1,chr1	-,+,+	ZNF847P,ZNF678,ZNF678	135406,1167,1167
chr4:98952758-98953728	chr4	+	98953462	98953744	True	NM_174952,NM_001100426	chr4,chr4	-,+	C4orf37,RAP1GDS1	110702,228782
chr10:94450703-94451396	chr10	+	94450732	94451344	True	NM_002729,NM_004969	chr10,chr10	+,-	HHEX,IDE	-1110,-116880
chr12:106640819-106641023	chr12	+	106640819	106641031	True	NM_006825,NM_152772	chr12,chr12	-,+	CKAP4,TCP11L2	732,55549
chr17:12921295-12921507	chr17	+	12921313	12921485	True	NM_014859,NM_018127,NM_001165962,NM_173717	chr17,chr17,chr17,chr17	+,-,-,-	ARHGAP44,ELAC2,ELAC2,ELAC2	-228535,-20,-20,-20
chrX:2749057-2750734	chrX	+	2749090	2750364	True	NM_001184703,NM_001184702,NM_001184704,NM_003918,NM_001079855,NM_001669	chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,-	GYG2,GYG2,GYG2,GYG2,GYG2,ARSD	-2279,-2279,-2279,-2279,-2279,97078
chr2:149411809-149412149	chr2	+	149411874	149411975	True	NM_181742,NM_015630	chr2,chr2	-,+	ORC4,EPC2	-632701,-9372
chr1:154944443-154945841	chr1	+	154944811	154945695	True	NM_003029,NM_001826,NR_036212,NR_024163,NM_001130041,NM_001130040,NM_183001,NM_001202859	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,+,-,-,-,-	SHC1,CKS1B,MIR4258,CKS1B,SHC1,SHC1,SHC1,SHC1	1314,1422,2473,1422,1314,-1588,-1588,1314
chr10:28551268-28551704	chr10	+	28551362	28551682	True	NR_024557,NM_173496	chr10,chr10	+,-	WAC,MPP7	269744,19435
chr19:18795194-18796321	chr19	+	18795194	18796098	True	NM_004750,NM_001098482,NM_015321	chr19,chr19,chr19	-,+,+	CRLF1,CRTC1,CRTC1	-77534,-820,-820
chr13:111362651-111363416	chr13	+	111362742	111363434	True	NM_198218,NM_198219,NM_005537,NM_024537,NM_198217	chr13,chr13,chr13,chr13,chr13	+,+,+,-,+	ING1,ING1,ING1,CARS2,ING1	2175,2190,3924,-4262,1648
chr14:70038995-70039322	chr14	+	70039142	70039342	True	NR_024630,NM_014734	chr14,chr14	-,+	C14orf162,KIAA0247	-1224,38967
chr3:49904266-49904704	chr3	+	49904306	49904700	True	NM_203370,NM_024046	chr3,chr3	+,-	C3orf54,CAMKV	-63671,2719
chr2:234217678-234217897	chr2	+	234217690	234217936	True	NM_000541,NM_018218	chr2,chr2	+,-	SAG,USP40	-1432,256350
chr7:128467956-128469797	chr7	+	128468000	128469773	True	NM_001127487,NM_001708,NM_001458	chr7,chr7,chr7	+,-,+	FLNC,OPN1SW,FLNC	709,-52156,709
chr11:73877075-73878058	chr11	+	73877383	73878075	True	NM_015531,NM_016147	chr11,chr11	-,+	C2CD3,PPME1	4039,4292
chr17:79622080-79622384	chr17	+	79622090	79622151	True	NM_002602,NM_199287,NR_026872	chr17,chr17,chr17	-,+,-	PDE6G,CCDC137,PDE6G	1507,11609,1507
chr1:43998078-43998612	chr1	+	43998077	43998454	True	NM_002840,NM_031207,NM_130440	chr1,chr1,chr1	+,-,+	PTPRF,HYI,PTPRF	-1581,-78417,-1581
chr5:72744510-72744948	chr5	+	72744520	72744918	True	NM_004472,NM_001037637	chr5,chr5	-,+	FOXD1,BTF3	-168,49331
chr2:242576725-242576942	chr2	+	242576734	242576920	True	NM_015963,NM_013325,NM_178326	chr2,chr2,chr2	-,+,+	THAP4,ATG4B,ATG4B	-9,106,106
chr17:41275799-41276411	chr17	+	41275914	41276439	True	NR_003108,NM_007299,NM_007298,NM_007297,NM_007294,NR_027676,NM_007300	chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,-,-,-,-	NBR2,BRCA1,BRCA1,BRCA1,BRCA1,BRCA1,BRCA1	1160,1079,116,1079,1111,951,1111
chr12:6928646-6929223	chr12	+	6928672	6929254	True	NM_014262,NM_031299,NM_019858,NM_014449	chr12,chr12,chr12,chr12	+,-,+,+	LEPREL2,CDCA3,GPR162,GPR162	8317,31252,1708,1708
chr9:79088658-79089986	chr9	+	79088667	79090035	True	NM_001097635,NM_018339	chr9,chr9	+,-	GCNT1,RFK	3221,-79223
chr1:40039779-40040048	chr1	+	40039876	40040086	True	NM_001135653,NM_003819,NM_001135654,NR_002983,NM_181809	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	PABPC4,PABPC4,PABPC4,SNORA55,BMP8A	2485,2485,2485,-6694,-82609
chr3:39187753-39188180	chr3	+	39187806	39188176	True	NM_033027,NM_145755	chr3,chr3	-,+	CSRNP1,TTC21A	6976,-38705
chr3:13519670-13520480	chr3	+	13519718	13520374	True	NM_001136041,NM_024827,NM_024923	chr3,chr3,chr3	+,+,-	HDAC11,HDAC11,NUP210	1469,1340,-57909
chr12:21599281-21600845	chr12	+	21599465	21600591	True	NM_134431,NM_024854	chr12,chr12	-,+	SLCO1A2,PYROXD1	-51094,-8978
chr19:7985704-7985958	chr19	+	7985895	7986007	True	NM_206833,NM_001195259,NM_003083,NR_030717	chr19,chr19,chr19,chr19	-,+,+,+	CTXN1,LOC645781,SNAPC2,SNAPC2	5094,-4914,-752,-79
chr8:37334134-37335524	chr8	+	37334218	37335562	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	217738,270052
chr19:44597478-44598390	chr19	+	44597641	44598414	True	NR_033341,NM_013398	chr19,chr19	-,+	LOC100379224,ZNF224	18972,67
chr22:30880320-30881455	chr22	+	30880547	30881492	True	NR_001580,NM_016498	chr22,chr22	-,+	SDC4P,MTFP1	-2804,-58989
chr6:150039344-150039664	chr6	+	150039344	150039630	True	NM_004690,NM_005389	chr6,chr6	-,+	LATS1,PCMT1	48,31200
chr11:88953779-88955446	chr11	+	88954003	88955442	True	NM_000842,NM_000372	chr11,chr11	-,+	GRM5,TYR	-157187,-43015
chr12:131721478-131722178	chr12	+	131721627	131722217	True	NR_026670,NM_194356	chr12,chr12	+,-	LOC116437,STX2	-72122,-397816
chr14:103524693-103525176	chr14	+	103524709	103525027	True	NM_001077594,NM_006035	chr14,chr14	+,-	EXOC3L4,CDC42BPB	41453,-967
chr6:111195299-111195789	chr6	+	111195346	111195576	True	NM_001634,NM_015076,NM_001033059	chr6,chr6,chr6	+,-,+	AMD1,CDK19,AMD1	410,-58934,411
chr19:48750349-48751528	chr19	+	48750721	48751518	True	NM_001184904,NM_001184901,NM_001184900,NM_001184903,NM_001184902,NM_014959,NR_033680,NR_033678,NR_033679,NM_153608	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,-,-,+	CARD8,CARD8,CARD8,CARD8,CARD8,CARD8,CARD8,CARD8,CARD8,ZNF114	7735,1636,-6401,1636,7735,1636,1422,1422,-6401,23135
chr19:21104788-21106041	chr19	+	21105010	21106000	True	NM_003429,NR_034060,NM_145297	chr19,chr19,chr19	+,+,-	ZNF85,ZNF85,ZNF626	58,58,-260608
chr6:52433284-52434110	chr6	+	52433313	52433869	True	NM_012288,NR_024403	chr6,chr6	-,+	TRAM2,LOC730101	8043,95329
chr20:32320494-32321011	chr20	+	32320517	32320809	True	NM_032819,NM_183397	chr20,chr20	+,-	ZNF341,PXMP4	-760,-12381
chr16:85723171-85723413	chr16	+	85723175	85723403	True	NM_014615,NM_016095	chr16,chr16	+,-	KIAA0182,GINS2	-76306,-587
chr1:212796906-212798039	chr1	+	212796972	212797859	True	NM_153606,NM_018664	chr1,chr1	+,-	FAM71A,BATF3	-71,75518
chr5:273464-274134	chr5	+	273536	274143	True	NM_145265,NM_013232	chr5,chr5	-,+	CCDC127,PDCD6	-55239,-1860
chr6:53222544-53223591	chr6	+	53222676	53223586	True	NM_012347,NM_021814	chr6,chr6	+,-	FBXO9,ELOVL5	-286956,-8734
chr19:55368002-55369288	chr19	+	55368167	55368393	True	NM_006737,NM_001127255	chr19,chr19	+,-	KIR3DL2,NLRP7	-6320,90530
chr4:52861700-52862090	chr4	+	52861748	52862134	True	NM_145263,NM_001024611	chr4,chr4	+,-	SPATA18,LRRC66	55458,21702
chr20:57591946-57593012	chr20	+	57592092	57592898	True	NM_001336,NM_030773	chr20,chr20	-,+	CTSZ,TUBB1	-9783,1410
chr3:186380214-186381147	chr3	+	186380299	186380862	True	NM_000412,NM_001134415	chr3,chr3	+,-	HRG,TBCCD1	2935,-91967
chr20:1632284-1633823	chr20	+	1632300	1633864	True	NM_018556,NM_080816,NM_001039508,NM_001040022	chr20,chr20,chr20,chr20	-,-,-,+	SIRPG,SIRPG,SIRPG,SIRPA	4611,4611,4611,240948
chr2:14769029-14769699	chr2	+	14769056	14769664	True	NM_015909,NM_145175	chr2,chr2	-,+	NBAS,FAM84A	931847,3145
chr4:74121736-74123689	chr4	+	74121981	74123653	True	NM_032217,NM_000477,NM_198889	chr4,chr4,chr4	-,+,-	ANKRD17,ALB,ANKRD17	899,146318,899
chr16:1543214-1543458	chr16	+	1543356	1543482	True	NM_001013658,NM_016111	chr16,chr16	-,+	PTX4,TELO2	-4888,-55
chr5:112313486-112313765	chr5	+	112313488	112313563	True	NM_005669,NM_152624	chr5,chr5	-,+	REEP5,DCP2	-55457,-1108
chr22:21772164-21772417	chr22	+	21772170	21772342	True	NM_015094,NR_003700	chr22,chr22	+,-	HIC2,PI4KAP2	-528,99488
chr22:21772164-21772417	chr22	-	20427146	20427318	False	NR_003563,NR_026919	chr22,chr22	-,+	PI4KAP1,LOC150197	-28451,-233342
chr22:21772164-21772417	chr22	-	21871120	21871292	False	NR_003700,NM_003347	chr22,chr22	-,+	PI4KAP2,UBE2L3	538,50664
chr1:39958341-39958607	chr1	+	39958382	39958632	True	NR_003929,NM_181809	chr1,chr1	-,+	PPIEL,BMP8A	66788,-1115
chr11:69923652-69923940	chr11	+	69923757	69923933	True	NM_005247,NM_018043,NR_030691	chr11,chr11,chr11	-,+,+	FGF3,ANO1,ANO1	-289565,474,7582
chr11:65429240-65429652	chr11	+	65429256	65429470	True	NM_021975,NM_153253,NM_001145138	chr11,chr11,chr11	-,+,-	RELA,SIPA1,RELA	1023,-21715,1023
chr17:48587606-48587927	chr17	+	48587651	48587975	True	NM_032133,NM_001267	chr17,chr17	+,-	MYCBPAP,CHAD	-1957,-41424
chr13:46605345-46607149	chr13	+	46605870	46607196	True	NM_015070,NM_152719	chr13,chr13	-,+	ZC3H13,SPERT	19748,-329488
chr17:48172616-48172952	chr17	+	48172622	48172946	True	NM_001199899,NM_001199898,NM_174920,NM_002611,NM_001199900	chr17,chr17,chr17,chr17,chr17	+,+,-,+,+	PDK2,PDK2,SAMD14,PDK2,PDK2	112,-572,34271,-34,-34
chr5:139737442-139737704	chr5	+	139737474	139737701	True	NM_001945,NM_031467	chr5,chr5	-,+	HBEGF,SLC4A9	-11286,2085
chr10:43760440-43760691	chr10	+	43760636	43760730	True	NM_001184963,NM_145313	chr10,chr10	+,-	FXYD4,RASGEF1A	106361,1687
chr6:132127639-132128740	chr6	+	132127738	132128604	True	NM_006208,NM_001145659	chr6,chr6	+,-	ENPP1,CTAGE9	551,-95581
chr3:196239672-196240221	chr3	+	196239700	196239931	True	NM_001105573,NM_152617,NM_001077657	chr3,chr3,chr3	+,-,-	FBXO45,RNF168,C3orf43	55793,-9061,2359
chr17:46906662-46907340	chr17	+	46906774	46907120	True	NM_005831,NM_001130918	chr17,chr17	+,-	CALCOCO2,TTLL6	1251,-12305
chr2:219075428-219077028	chr2	+	219075735	219076758	True	NM_000634,NM_005731,NM_152862	chr2,chr2,chr2	-,+,+	CXCR1,ARPC2,ARPC2	-44019,5361,5115
chr6:39276954-39278292	chr6	+	39277124	39278084	True	NM_031460,NM_001135111,NM_002062	chr6,chr6,chr6	-,-,+	KCNK17,KCNK17,GLP1R	4202,4203,-260625
chr20:1875642-1875963	chr20	+	1875668	1875814	True	NM_080792,NM_001190892,NM_001040023,NM_001040022	chr20,chr20,chr20,chr20	+,-,+,+	SIRPA,PDYN,SIRPA,SIRPA	-294,97688,11,-906
chr1:198128264-198129558	chr1	+	198128480	198129339	True	NM_133494,NM_133262	chr1,chr1	+,-	NEK7,ATP6V1G3	-2423,380793
chr7:71876591-71876934	chr7	+	71876590	71876970	True	NR_001588,NM_031468	chr7,chr7	+,-	SBDSP1,CALN1	422981,440
chr19:6110842-6111063	chr19	+	6110841	6110901	True	NM_000635,NM_030924,NM_134433	chr19,chr19,chr19	-,+,-	RFX2,ACSBG2,RFX2	-177,24808,-177
chr3:39319188-39320505	chr3	+	39319231	39320420	True	NM_001171171,NM_001171172,NM_005201,NM_001171174,NM_001337	chr3,chr3,chr3,chr3,chr3	-,-,+,-,-	CX3CR1,CX3CR1,CCR8,CX3CR1,CX3CR1	2394,1560,50776,2856,1157
chr5:149116813-149117276	chr5	+	149116841	149117283	True	NM_001172698,NM_001892,NM_133263	chr5,chr5,chr5	+,-,+	PPARGC1B,CSNK1A1,PPARGC1B	-7077,-185834,-7077
chr2:120436949-120437263	chr2	+	120437094	120437268	True	NM_001105199,NM_001105198,NM_002980,NM_030577	chr2,chr2,chr2,chr2	+,+,-,+	TMEM177,TMEM177,SCTR,TMEM177	-402,-402,-155066,-402
chr17:35993345-35994133	chr17	+	35993379	35993928	True	NM_007010,NM_007026	chr17,chr17	-,+	DDX52,DUSP14	9621,-143487
chr11:27490779-27491028	chr11	+	27490781	27491039	True	NM_018490,NR_002832	chr11,chr11	-,+	LGR4,BDNF-AS1	3345,37359
chr4:184828471-184829637	chr4	+	184828586	184829583	True	NM_020225,NM_152682	chr4,chr4	+,-	STOX2,RWDD4	-2128,-248255
chr1:854737-855191	chr1	+	854778	855122	True	NM_152486,NR_026874	chr1,chr1	+,-	SAMD11,FLJ39609	5998,15
chr12:76426261-76426477	chr12	+	76426280	76426508	True	NM_007350,NM_006851	chr12,chr12	-,+	PHLDA1,GLIPR1	-724,-551818
chr11:114562674-114564170	chr11	+	114562867	114564143	True	NM_017678,NM_182495	chr11,chr11	-,+	FAM55D,FAM55B	-96383,-13718
chr14:74703902-74704114	chr14	+	74703902	74704162	True	NM_182894,NM_005050	chr14,chr14	+,-	VSX2,ABCD4	2012,65655
chr1:12853184-12855045	chr1	+	12853195	12854704	True	NM_023013,NM_001146344	chr1,chr1	+,-	PRAMEF1,PRAMEF11	-1702,36611
chr1:24071246-24072700	chr1	+	24071357	24072453	True	NM_003198,NM_001127621	chr1,chr1	+,-	TCEB3,GALE	-1552,53657
chr3:178984830-178985553	chr3	+	178984884	178985407	True	NM_016331,NR_028135,NM_171829,NM_171828,NM_001163677	chr3,chr3,chr3,chr3,chr3	+,-,-,-,-	ZNF639,KCNMB3,KCNMB3,KCNMB3,KCNMB3	56143,-7205,-7205,-46,-46
chr3:48230396-48231320	chr3	+	48230685	48231271	True	NM_001789,NM_004345,NM_201567	chr3,chr3,chr3	-,+,-	CDC25A,CAMP,CDC25A	-884,33590,-884
chr14:94852721-94853009	chr14	+	94852734	94853008	True	NM_001127704,NM_001127705,NM_001127706,NM_001127707,NM_001127700,NM_001127701,NM_001127702,NM_001127703,NM_006215,NM_001002236,NM_001002235,NM_000295	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	-,-,-,-,-,-,-,-,+,-,-,-	SERPINA1,SERPINA1,SERPINA1,SERPINA1,SERPINA1,SERPINA1,SERPINA1,SERPINA1,SERPINA4,SERPINA1,SERPINA1,SERPINA1	4071,4071,4071,4071,4071,4071,4071,4071,174774,4071,4071,2195
chrX:13591309-13592293	chrX	+	13591344	13592289	True	NM_001011658,NM_001167890,NM_015507	chrX,chrX,chrX	-,+,+	TRAPPC2,EGFL6,EGFL6	160516,-3701,-3701
chr12:53689269-53689492	chr12	+	53689274	53689518	True	NM_021640,NM_002624,NM_001173466,NM_145897	chr12,chr12,chr12,chr12	+,+,-,+	C12orf10,PFDN5,AAAS,PFDN5	3951,-90,25944,-90
chr4:115519714-115520070	chr4	+	115519719	115520101	True	NM_022569,NM_001128174	chr4,chr4	-,+	NDST4,UGT8	514981,-159
chrX:125299964-125300172	chrX	+	125300019	125300177	True	NM_001013628,NM_001122716	chrX,chrX	-,+	DCAF12L2,CXorf64	27,653569
chr4:186314838-186315334	chr4	+	186314972	186315073	True	NM_181726,NM_018409	chr4,chr4	+,-	ANKRD37,LRP2BP	2766,-14820
chr17:74024010-74024297	chr17	+	74024231	74024337	True	NM_001258,NM_001988	chr17,chr17	+,-	CDK3,EVPL	-27295,-724
chr10:35893790-35894205	chr10	+	35893856	35894250	True	NM_153368,NM_031866	chr10,chr10	+,-	GJD4,FZD8	87,36162
chr3:69167426-69168004	chr3	+	69167616	69168042	True	NM_006407,NM_198271	chr3,chr3	+,-	ARL6IP5,LMOD3	-33578,3754
chr8:37709416-37711201	chr8	+	37709825	37711229	True	NM_018310,NM_032777	chr8,chr8	-,+	BRF2,GPR124	-2394,-55475
chr16:1584523-1585562	chr16	+	1584528	1585452	True	NM_001013658,NM_024600	chr16,chr16	-,+	PTX4,TMEM204	-46060,-348
chrX:151143466-151143715	chrX	+	151143663	151143733	True	NM_004961,NM_001011550	chrX,chrX	-,+	GABRE,MAGEA4	-512,-56954
chr5:68524832-68526346	chr5	+	68525020	68526242	True	NM_176816,NM_001799	chr5,chr5	-,+	CCDC125,CDK7	90231,4379
chr19:57702440-57702826	chr19	+	57702523	57702757	True	NM_001012729,NM_003417	chr19,chr19	-,+	DUXA,ZNF264	-23667,110
chr1:200839494-200839790	chr1	+	200839506	200839654	True	NM_005298,NM_017596	chr1,chr1	+,-	GPR25,KIF21B	2511,153224
chr17:76353950-76354270	chr17	+	76354068	76354260	True	NM_003955,NM_024419	chr17,chr17	-,+	SOCS3,PGS1	1948,20474
chr10:129846926-129847646	chr10	+	129847013	129847679	True	NM_130435,NM_001145966	chr10,chr10	+,-	PTPRE,MKI67	-1252,76839
chr19:17935318-17936430	chr19	+	17935787	17936271	True	NM_014256,NM_005543	chr19,chr19	+,-	B3GNT3,INSL3	-29919,-3467
chr3:160810704-160812624	chr3	+	160810891	160812076	True	NM_015938,NM_033169	chr3,chr3	+,-	NMD3,B3GALNT1	127022,10671
chr10:88865554-88866055	chr10	+	88865560	88866104	True	NM_019054,NM_005271	chr10,chr10	+,-	FAM35A,GLUD1	-10659,-10784
chr10:11049950-11051502	chr10	+	11050004	11051470	True	NR_024411,NM_006561,NM_001025077	chr10,chr10,chr10	-,+,+	LOC254312,CELF2,CELF2	-55878,8422,-2796
chr19:13212944-13213307	chr19	+	13213087	13213325	True	NM_005583,NM_052876	chr19,chr19	-,+	LYL1,NACC1	699,15783
chr11:14522874-14523600	chr11	+	14522942	14523544	True	NM_001144062,NM_016451,NM_001144061,NM_000922	chr11,chr11,chr11,chr11	-,-,-,+	COPB1,COPB1,COPB1,PDE3B	-1527,-1538,-1501,141724
chr6:151647117-151648138	chr6	+	151647130	151647839	True	NM_144497,NM_020861	chr6,chr6	+,-	AKAP12,ZBTB2	-515,64896
chr1:12819341-12820842	chr1	+	12819427	12820759	True	NM_001080830,NM_001146344,NM_152290	chr1,chr1,chr1	+,-,+	PRAMEF12,PRAMEF11,C1orf158	14224,70555,-13316
chr9:131577022-131577691	chr9	+	131577250	131577628	True	NM_016390,NM_004435	chr9,chr9	-,+	C9orf114,ENDOG	14520,3150
chr9:43139905-43140890	chr9	+	43140856	43140924	True	NR_027472,NR_026558,NM_001012419,NM_001012421	chr9,chr9,chr9,chr9	-,+,-,-	LOC642929,AQP7P3,ANKRD20A3,ANKRD20A2	4610,-282755,-7312,-7312
chr20:25566981-25567364	chr20	+	25567183	25567289	True	NM_025176,NM_021067	chr20,chr20	-,+	NINL,GINS1	-1030,-178919
chr2:166439044-166440222	chr2	+	166439083	166440034	True	NM_004482,NM_024969	chr2,chr2	-,+	GALNT3,CSRNP3	210826,-10289
chr1:213024066-213025853	chr10	-	58847091	58847150	True	NR_037490,NM_018464	chr10,chr10	-,+	MIR3924,CISD1	217228,1181744
chr6:53405867-53407534	chr6	+	53406033	53407489	True	NM_018214,NM_001498,NM_001197115	chr6,chr6,chr6	+,-,-	LRRC1,GCLC,GCLC	252288,2489,2489
chr18:77906648-77906906	chr18	+	77906691	77906818	True	NM_032510,NR_028339	chr18,chr18	-,+	PARD6G,LOC100130522	98630,-935
chr20:61197149-61197470	chr20	+	61197288	61197486	True	NR_033263,NR_029676	chr20,chr20	-,+	C20orf200,MIR133A2	-48520,-35220
chr4:169218220-169220033	chr4	+	169218361	169219928	True	NM_017631,NM_001166108	chr4,chr4	-,+	DDX60,PALLD	20091,198288
chr19:55049749-55050416	chr19	+	55049884	55050206	True	NR_026716,NM_145057	chr19,chr19	+,-	KIR3DX1,CDC42EP5	-6033,-65462
chr19:58513201-58513454	chr19	+	58513351	58513503	True	NR_036508,NM_025027	chr19,chr19	+,-	LOC100128398,ZNF606	758,1261
chr18:77793507-77793782	chr18	+	77793605	77793717	True	NM_024805,NM_001171967,NM_006701	chr18,chr18,chr18	+,+,-	RBFA,RBFA,TXNL4A	628,628,-45073
chr5:54457943-54459156	chr5	+	54458318	54458919	True	NR_031572,NR_029960,NM_001008397,NR_030387	chr5,chr5,chr5,chr5	-,-,+,-	MIR449C,MIR449A,GPX8,MIR449B	9319,7588,-2396,7708
chr2:218807606-218808502	chr2	+	218807632	218808496	True	NR_034176,NM_022648	chr2,chr2	+,-	RUFY4,TNS1	91160,350
chr11:69062290-69062525	chr11	+	69062302	69062572	True	NM_145015,NM_138768	chr11,chr11	-,+	MRGPRF,MYEOV	-281452,-731
chr1:249133697-249133901	chr1	+	249133780	249133936	True	NM_024836,NM_030645	chr1,chr1	+,-	ZNF672,SH3BP5L	-1301,-13626
chr9:129618146-129619284	chr9	+	129618204	129618926	True	NM_001099270,NM_012098	chr9,chr9	+,-	ZBTB34,ANGPTL2	4017,266168
chr15:71175621-71176033	chr15	+	71175809	71175966	True	NM_001199018,NM_020147,NM_001199017,NM_017691	chr15,chr15,chr15,chr15	+,-,+,+	LRRC49,THAP10,LRRC49,LRRC49	9052,8861,8961,8961
chr9:111625511-111625803	chr9	+	111625520	111625816	True	NM_006687,NM_006686	chr9,chr9	+,-	ACTL7A,ACTL7B	-968,-7245
chr9:116106826-116108405	chr9	+	116107174	116108241	True	NM_001012361,NM_145241,NM_017688	chr9,chr9,chr9	-,-,+	WDR31,WDR31,BSPRY	-4554,-4554,3570
chrX:47093321-47095030	chrX	+	47093555	47094977	True	NR_024235,NM_004651	chrX,chrX	-,+	NDUFB11,USP11	-88946,-1293
chr15:77092664-77094603	chr15	+	77092665	77094621	True	NM_002902,NM_001145923	chr15,chr15	+,-	RCN2,SCAPER	129340,59714
chr16:67427545-67427988	chr16	+	67427569	67427909	True	NM_016140,NM_015964,NM_000196	chr16,chr16,chr16	-,-,+	TPPP3,TPPP3,HSD11B2	-148,-148,37126
chr2:233390805-233391272	chr2	+	233391135	233391317	True	NM_001195129,NM_145702,NM_000751	chr2,chr2,chr2	+,-,+	PRSS56,TIGD1,CHRND	-6013,23959,-264
chr5:70197101-70197391	chr5	+	70197102	70197416	True	NM_001178087,NM_022968,NM_004536,NM_021967,NM_022978	chr5,chr5,chr5,chr5,chr5	+,+,-,+,+	SERF1B,SERF1A,NAIP,SERF1A,SERF1B	-657,-663,123579,-663,-657
chr5:70197101-70197391	chr5	+	69321684	69321998	False	NM_001178087,NM_022968,NR_024054,NM_021967,NM_022978	chr5,chr5,chr5,chr5,chr5	+,+,-,+,+	SERF1B,SERF1A,LOC100170939,SERF1A,SERF1B	-657,-663,199678,-663,-657
chr11:2171096-2172017	chr11	+	2171098	2171924	True	NM_001127598,NR_028043,NR_028044,NM_001007139	chr11,chr11,chr11,chr11	-,+,+,-	IGF2,IGF2AS,IGF2AS,IGF2	-8757,-9391,-9391,-265
chr1:155896616-155897450	chr1	+	155896683	155897205	True	NM_014949,NR_002974,NM_181885,NR_003005	chr1,chr1,chr1,chr1	-,-,+,-	KIAA0907,SNORA42,RXFP4,SCARNA4	7043,-6850,14274,-806
chr7:149574273-149575422	chr7	+	149574555	149575197	True	NM_001100592,NM_145230,NR_027040	chr7,chr7,chr7	+,+,-	ATP6V0E2,ATP6V0E2,LOC401431	-4555,-4555,-3604
chr5:138846861-138847332	chr5	+	138847024	138847238	True	NM_003339,NM_001077693	chr5,chr5	+,-	UBE2D2,ECSCR	93512,-4704
chr1:63248706-63249007	chr1	+	63248827	63248891	True	NM_033407,NM_178221,NM_032852	chr1,chr1,chr1	-,+,+	DOCK7,ATG4C,ATG4C	-94858,885,885
chr6:57065056-57065972	chr6	+	57065401	57065681	True	NM_183227,NM_004282	chr6,chr6	-,+	RAB23,BAG2	20626,-28348
chr9:129619529-129621311	chr9	+	129619732	129621341	True	NM_001099270,NM_012098	chr9,chr9	+,-	ZBTB34,ANGPTL2	1602,263753
chr5:37376304-37376520	chr5	+	37376345	37376467	True	NM_153485,NM_018034,NM_004298	chr5,chr5,chr5	-,+,-	NUP155,WDR70,NUP155	-5148,2944,-5458
chr4:83955791-83956073	chr4	+	83955812	83956096	True	NM_016129,NM_001115007	chr4,chr4	+,-	COPS4,LIN54	142,-21772
chrX:150862277-150862477	chrX	+	150862296	150862374	True	NR_029973,NR_033262,NM_024082	chrX,chrX,chrX	-,+,+	MIR452,PRRG3,PRRG3	265860,4404,1355
chr1:153516839-153517150	chr1	+	153516848	153517198	True	NM_002961,NM_002962,NM_002960,NM_019554,NM_006271,NM_014624	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,+,-	S100A4,S100A5,S100A3,S100A4,S100A1,S100A6	1134,-2607,4586,1134,83674,-8131
chrX:109244373-109245334	chrX	+	109244555	109245333	True	NM_032227,NM_017698,NR_004379	chrX,chrX,chrX	+,+,-	TMEM164,TMEM164,SNORD96B	1008,529,223005
chr14:23286897-23287902	chr14	+	23286968	23287567	True	NM_178336,NM_001126105,NM_003982,NM_001126106	chr14,chr14,chr14,chr14	+,-,-,-	MRPL52,SLC7A7,SLC7A7,SLC7A7	11524,-1896,-1896,1497
chr15:27217184-27217455	chr15	+	27217354	27217494	True	NM_021912,NM_033223	chr15,chr15	-,+	GABRB3,GABRG3	-198419,-976
chr1:151688585-151688822	chr1	+	151688622	151688784	True	NM_001144956,NM_007185,NM_001172649,NM_001172648	chr1,chr1,chr1,chr1	+,-,-,-	RIIAD1,CELF3,CELF3,CELF3	5228,556,148,58
chr9:140010100-140010316	chr9	+	140010190	140010254	True	NM_013379,NM_000832	chr9,chr9	-,+	DPP7,GRIN1	-995,23354
chr13:19522644-19522879	chr13	+	19522800	19522878	True	NR_027995,NR_026852	chr13,chr13	-,+	LOC284232,LOC348021	-76691,59520
chr2:231063612-231064636	chr2	+	231063667	231064576	True	NM_004509,NM_001005176	chr2,chr2	-,+	SP110,SP140	20307,25868
chr9:106870583-106871473	chr9	+	106870679	106871401	True	NM_001001919,NM_001042550	chr9,chr9	-,+	OR13C4,SMC2	418139,-13899
chr3:124606396-124606611	chr3	+	124606469	124606593	True	NM_002213,NR_033437	chr3,chr3	-,+	ITGB5,UMPS	-325,-157307
chr19:52430068-52430702	chr19	+	52430248	52430600	True	NM_024840,NM_001031721,NM_023074	chr19,chr19,chr19	+,+,-	ZNF613,ZNF613,ZNF649	87,87,-21943
chr2:27502263-27502645	chr2	+	27502450	27502517	True	NM_003459,NM_173650,NM_187841,NM_032546	chr2,chr2,chr2,chr2	-,+,+,+	SLC30A3,DNAJC5G,TRIM54,TRIM54	-16490,-4212,2779,2779
chr3:16977022-16978744	chr3	+	16977232	16978769	True	NM_015184,NM_001351,NR_037465	chr3,chr3,chr3	+,-,+	PLCL2,DAZL,MIR3714	-2708,-330226,-2602
chr19:51473699-51474468	chr19	+	51473770	51474490	True	NM_005551,NM_001012964,NM_001012965,NM_002774	chr19,chr19,chr19,chr19	+,-,-,-	KLK2,KLK6,KLK6,KLK6	-97132,-1723,-1723,-841
chr11:101979173-101980595	chr11	+	101979243	101980635	True	NM_001195045,NM_001195044,NM_001130145,NM_006106,NM_178127	chr11,chr11,chr11,chr11,chr11	+,+,+,+,-	YAP1,YAP1,YAP1,YAP1,ANGPTL5	2535,556,556,556,-191990
chr3:52352355-52352904	chr3	+	52352369	52352903	True	NM_015512,NR_029677	chr3,chr3	+,-	DNAH1,MIR135A1	-2085,-24045
chr2:33744596-33746331	chr2	+	33744864	33746369	True	NM_015376,NM_015475	chr2,chr2	+,-	RASGRP3,FAM98A	-5973,78049
chr15:77286561-77286884	chr15	+	77286647	77286906	True	NM_003978,NM_001168412	chr15,chr15	+,-	PSTPIP1,TSPAN3	558,76714
chr18:33880301-33880537	chr18	+	33880376	33880582	True	NM_001099406,NM_025135	chr18,chr18	-,+	SLC39A6,FHOD3	-171019,-2725
chr3:180359697-180360869	chr3	+	180359779	180360518	True	NM_133462,NM_181426	chr3,chr3	+,-	TTC14,CCDC39	-39920,36826
chr1:182640755-182641095	chr1	+	182640776	182641076	True	NM_001102450,NM_033345,NR_036490	chr1,chr1,chr1	-,-,+	RGS8,RGS8,LOC284648	1041,1041,-56552
chr18:65173308-65174506	chr18	+	65173486	65174305	True	NM_032160,NR_033921	chr18,chr18	-,+	DSEL,LOC643542	9719,9477
chr16:21315112-21316286	chr16	+	21315135	21316101	True	NR_026675,NM_001014444,NM_001888	chr16,chr16,chr16	+,-,-	NCRNA00169,CRYM,CRYM	-3019,-731,-731
chr20:61476106-61476632	chr20	+	61476262	61476450	True	NM_006602,NM_080750	chr20,chr20	-,+	TCFL5,DPH3P1	16715,25
chr14:39644958-39646664	chr14	+	39645191	39646686	True	NM_001079537,NM_177452,NM_002687	chr14,chr14,chr14	-,-,+	TRAPPC6B,TRAPPC6B,PNN	-5557,-5557,-856
chr3:187591272-187592340	chr3	+	187591652	187592356	True	NR_034062,NM_001706	chr3,chr3	+,-	LOC100131635,BCL6	-171550,-128139
chrX:70521912-70522391	chrX	+	70521951	70522373	True	NM_001171162,NM_012278	chrX,chrX	-,+	ZMYM3,ITGB1BP2	-46904,-375
chr16:30904879-30905083	chr16	+	30905028	30905088	True	NM_001330,NM_004765,NR_031576,NM_001142544	chr16,chr16,chr16,chr16	+,-,+,+	CTF1,BCL7C,MIR762,CTF1	2839,361,135,2839
chr10:52381448-52382480	chr10	+	52381577	52382529	True	NM_147156,NM_001079516	chr10,chr10	-,+	SGMS1,ASAH2B	1258,117178
chr10:119300410-119301022	chr10	+	119300414	119301056	True	NM_004098,NR_002791,NM_001165924	chr10,chr10,chr10	+,-,+	EMX2,EMX2OS,EMX2	899,3573,899
chr4:38672761-38673142	chr4	+	38672805	38673069	True	NM_016531,NR_026804	chr4,chr4	+,-	KLF3,FLJ13197	-7066,-6556
chr1:151147842-151148359	chr1	+	151147947	151148253	True	NM_013353,NR_037937,NM_001204856,NM_001136543,NM_024041,NM_212551	chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,-,+,-	TMOD4,SCNM1,SCNM1,LYSMD1,SCNM1,LYSMD1	359,-9500,-9500,-9523,-9500,-9577
chr4:100453744-100455156	chr4	+	100453747	100454977	True	NM_152292,NM_032149	chr4,chr4	-,+	RG9MTD2,C4orf17	29898,-21637
chr13:24150565-24151384	chr13	+	24150635	24151419	True	NM_148957,NM_001204458,NM_001204459,NM_014363,NM_018647	chr13,chr13,chr13,chr13,chr13	+,+,+,-,+	TNFRSF19,TNFRSF19,TNFRSF19,SACS,TNFRSF19	-6184,2079,-6184,-142794,2079
chr1:153386183-153387321	chr1	+	153386591	153387365	True	NM_176823,NM_002964	chr1,chr1	+,-	S100A7A,S100A8	1634,-22927
chr15:27216934-27217151	chr15	+	27216946	27217198	True	NM_021912,NM_033223	chr15,chr15	-,+	GABRB3,GABRG3	-198011,-568
chr1:16538745-16539040	chr1	+	16538769	16538929	True	NM_153213,NM_001114600	chr1,chr1	-,+	ARHGEF19,C1orf144	225,154653
chr5:1522523-1522814	chr5	+	1522728	1522862	True	NM_024830,NM_004553	chr5,chr5	-,+	LPCAT1,NDUFS6	1264,278633
chr5:171612564-171613482	chr5	+	171612577	171613347	True	NM_005990,NM_001171183	chr5,chr5	-,+	STK10,EFCAB9	2049,7828
chr4:39411466-39412764	chr4	+	39411617	39412613	True	NM_002913,NM_175737	chr4,chr4	-,+	RFC1,KLB	-43616,-3195
chr8:119124494-119125373	chr8	+	119124775	119125399	True	NM_080651,NM_000127	chr8,chr8	+,-	MED30,EXT1	-591861,-717
chr19:40792688-40793403	chr19	+	40792740	40793118	True	NM_001031696,NR_030371,NM_001626	chr19,chr19,chr19	+,-,-	PLD3,MIR641,AKT2	61213,-4192,-1475
chr8:136282889-136283819	chr8	+	136282916	136283776	True	NR_026706,NR_029599	chr8,chr8	+,-	LOC286094,MIR30D	-36601,-465728
chr6:170601000-170601216	chr6	+	170601030	170601148	True	NM_032448,NM_005618	chr6,chr6	+,-	FAM120B,DLL1	14695,-1333
chr20:37240520-37241203	chr20	+	37240653	37240996	True	NM_001164431,NR_027241	chr20,chr20	+,-	ARHGAP40,LOC388796	-10134,-176635
chr12:76479443-76480952	chr12	+	76479489	76480679	True	NM_004537,NM_139207,NM_006851	chr12,chr12,chr12	-,-,+	NAP1L1,NAP1L1,GLIPR1	-751,-751,-605029
chr1:226477533-226478132	chr1	+	226477554	226478035	True	NM_173083,NM_031944	chr1,chr1	-,+	LIN9,MIXL1	19221,-66227
chr22:38056045-38056700	chr22	+	38056121	38056723	True	NM_020315,NM_006498	chr22,chr22	+,-	PDXP,LGALS2	-1435,-80097
chr15:78371138-78372230	chr15	+	78371602	78372206	True	NM_015079,NM_001101404,NM_144572	chr15,chr15,chr15	-,+,-	TBC1D2B,SH2D7,TBC1D2B	-1608,12720,-1608
chr16:84150617-84150876	chr16	+	84150723	84150861	True	NM_003791,NM_178452	chr16,chr16	-,+	MBTPS1,LRRC50	-206,28003
chrX:77529426-77531064	chrX	+	77529470	77529588	True	NM_006639,NM_000291	chrX,chrX	-,+	CYSLTR1,PGK1	53553,-169860
chr9:72286565-72286823	chr9	+	72286589	72286837	True	NM_001163,NM_001010940	chr9,chr9	-,+	APBA1,C9orf135	488,148893
chr15:75180917-75181200	chr15	+	75180943	75181107	True	NM_005697,NM_002435	chr15,chr15	-,+	SCAMP2,MPI	-15273,1302
chr17:7942935-7943283	chr17	+	7943000	7943308	True	NM_001141,NM_001139,NM_001039131,NM_001039130	chr17,chr17,chr17,chr17	+,-,+,+	ALOX15B,ALOX12B,ALOX15B,ALOX15B	-693,47763,-693,-693
chr9:34663046-34663679	chr9	+	34663082	34663618	True	NM_147162,NM_006664,NM_004512	chr9,chr9,chr9	+,-,+	IL11RA,CCL27,IL11RA	-9208,-393,-9208
chr2:109202539-109203271	chr2	+	109202719	109203206	True	NM_004987,NM_022336,NM_001193488	chr2,chr2,chr2	+,-,+	LIMS1,EDAR,LIMS1	1560,402679,1715
chr18:14487508-14488051	chr18	+	14487574	14487906	True	NR_024076,NR_026756	chr18,chr18	-,+	CXADRP3,LOC284233	10849,-150203
chr18:14487508-14488051	chr15	+	21020663	21020717	False	NM_207355,NR_027411	chr15,chr15	-,+	POTEB,GOLGA8C	51312,-253042
chr18:14487508-14488051	chr15	+	22027337	22027391	False	NR_015416,NR_024387	chr15,chr15	+,-	LOC727924,CXADRP2	250640,-10459
chr22:20398004-20398213	chr22	+	20398033	20398093	True	NR_003563,NR_026919	chr22,chr22	-,+	PI4KAP1,LOC150197	652,-204229
chr22:20398004-20398213	chr22	+	21088179	21088239	False	NM_002650,NR_026815	chr22,chr22	-,+	PI4KA,TMEM191A	766,-32828
chr22:20398004-20398213	chr22	+	21842009	21842069	False	NM_015094,NR_003700	chr22,chr22	+,-	HIC2,PI4KAP2	-70367,29761
chrY:26364020-26364480	chrY	+	26364050	26364500	True	NR_002195,NR_001526,NR_001555	chrY,chrY,chrY	-,+,-	GOLGA2P3Y,TTTY17A,GOLGA2P2Y	-3072,266978,-3072
chrY:26364020-26364480	chrY	-	27597935	27598385	False	NR_002179,NR_002195,NR_001555	chrY,chrY,chrY	-,+,+	TTTY17C,GOLGA2P3Y,GOLGA2P2Y	-267015,3072,3072
chr10:69642817-69643683	chr10	+	69643016	69643676	True	NM_201262,NM_001142498,NM_012238	chr10,chr10,chr10	-,+,+	DNAJC12,SIRT1,SIRT1	-45079,1262,750
chr17:7145880-7146407	chr17	+	7145915	7146292	True	NM_015343,NM_007278,NM_004422,NM_203415,NM_203414,NM_203413,NM_015362,NM_001143775,NM_024297	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,+,+,+,+,-,-	CTDNEP1,GABARAP,DVL2,C17orf81,C17orf81,C17orf81,C17orf81,CTDNEP1,PHF23	9018,-162,-8052,9079,9258,9258,9258,8754,-3090
chr2:44395582-44395829	chr2	+	44395589	44395812	True	NM_001033557,NM_001033556,NM_177969,NM_177968,NM_002706,NM_133259	chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,+,-	PPM1B,PPM1B,PPM1B,PPM1B,PPM1B,LRPPRC	187,187,187,187,187,-172445
chr14:45363612-45363997	chr14	+	45363700	45363798	True	NM_017658,NM_001017923	chr14,chr14	-,+	KLHL28,C14orf28	67449,2708
chr16:67538015-67538386	chr16	+	67538103	67538405	True	NM_001138,NM_024519	chr16,chr16	-,+	AGRP,FAM65A	-20387,24311
chr22:31608070-31608386	chr22	+	31608216	31608434	True	NR_037496,NM_005569	chr22,chr22	-,+	MIR3928,LIMK2	-52111,-17
chr14:77352025-77352591	chr14	+	77352100	77352616	True	NM_015305,NM_194287	chr14,chr14	-,+	ANGEL1,C14orf166B	-72817,-59426
chr15:29864142-29864517	chr15	+	29864171	29864533	True	NM_015307,NR_026859	chr15,chr15	-,+	FAM189A1,FAM7A3	-1244,531401
chr2:173029872-173030713	chr2	+	173029941	173030210	True	NM_178120,NM_004405	chr2,chr2	+,-	DLX1,DLX2	-79784,-62463
chr11:63334000-63335872	chr11	+	63334550	63335663	True	NM_017878,NM_004585	chr11,chr11	-,+	HRASLS2,RARRES3	-3695,-30335
chr1:151514355-151514600	chr1	+	151514516	151514643	True	NM_001126337,NM_145796,NM_020127,NR_030280	chr1,chr1,chr1,chr1	+,-,+,+	TUFT1,POGZ,TUFT1,MIR554	-1791,-82575,-1791,3628
chr15:21005915-21006169	chr15	+	21005926	21006217	True	NR_027992,NR_027411	chr15,chr15	-,+	BCL8,GOLGA8C	-44446,-238303
chr15:21005915-21006169	chr15	+	22012609	22012900	False	NR_015416,NR_024387	chr15,chr15	+,-	LOC727924,CXADRP2	265131,4028
chr11:112831071-112831913	chr11	+	112831126	112831755	True	NR_034101,NM_001076682,NM_000615,NM_181351	chr11,chr11,chr11,chr11	-,+,+,+	LOC100288346,NCAM1,NCAM1,NCAM1	312925,239,239,239
chr21:45207344-45207699	chr21	+	45207345	45207483	True	NM_000100,NM_003683	chr21,chr21	-,+	CSTB,RRP1	-11086,1934
chr5:71403415-71404128	chr5	+	71403464	71404096	True	NM_005909,NM_015084	chr5,chr5	+,-	MAP1B,MRPS27	-397,212038
chr3:99943724-99944153	chr3	+	99943881	99944135	True	NM_001042459,NM_001199198	chr3,chr3	-,+	FILIP1L,TBC1D23	-110532,35550
chr19:9892746-9894348	chr19	+	9892854	9893603	True	NM_001048241,NM_001077624	chr19,chr19	+,-	UBL5,ZNF846	44964,-13444
chr15:44720039-44721918	chr15	+	44720097	44721754	True	NR_034171,NM_016396	chr15,chr15	-,+	LOC645212,CTDSPL2	107402,-569
chr5:95087425-95088555	chr5	+	95087677	95088541	True	NM_031952,NM_014899	chr5,chr5	-,+	SPATA9,RHOBTB3	-68963,-20890
chr1:226952913-226953316	chr1	+	226952937	226953305	True	NM_002221,NM_000447	chr1,chr1	-,+	ITPKB,PSEN2	-26061,104967
chr3:39426451-39427308	chr3	+	39426610	39427278	True	NM_001171174,NM_017875	chr3,chr3	-,+	CX3CR1,SLC25A38	-103384,-1855
chr11:6977623-6978529	chr11	+	6977627	6978549	True	NM_013249,NM_003700,NM_013250	chr11,chr11,chr11	-,-,+	ZNF214,OR2D2,ZNF215	63087,-63896,-30024
chr7:105163584-105164012	chr7	+	105163809	105163891	True	NM_021930,NM_019042	chr7,chr7	+,-	RINT1,PUS7	8640,-1124
chr8:31078115-31079869	chr8	+	31078337	31079915	True	NM_000553,NM_001015508	chr8,chr8	+,-	WRN,PURG	-187611,-187106
chr16:22449022-22449400	chr16	+	22449121	22449369	True	NR_027154,NR_027460	chr16,chr16	+,-	LOC641298,RRN3P3	-843,-85
chr16:22449022-22449400	chr16	-	21512513	21512571	False	NM_001077180,NR_027155	chr16,chr16	+,-	METTL9,LOC100271836	98284,1081
chr16:22449022-22449400	chr16	-	29605825	29605875	False	NR_002593,NM_001030288	chr16,chr16	-,+	SLC7A5P1,SPN	19213,68424
chr16:22449022-22449400	chr16	-	30345912	30345962	False	NR_002453,NM_013292	chr16,chr16	-,+	LOC595101,MYLPF	783,40160
chrX:51149433-51149660	chrX	+	51149436	51149708	True	NM_018159,NM_153183	chrX,chrX	-,+	NUDT11,NUDT10	89801,-74404
chr5:13946447-13948229	chr5	+	13946508	13948194	True	NM_007118,NM_001369	chr5,chr5	+,-	TRIO,DNAH5	195634,-1919
chr11:34127948-34128164	chr11	+	34128035	34128205	True	NM_001144030,NM_024662,NM_005574	chr11,chr11,chr11	+,+,-	NAT10,NAT10,LMO2	-975,-975,-214199
chr16:28942475-28942933	chr16	+	28942611	28942707	True	NM_024816,NM_001770,NM_001178098	chr16,chr16,chr16	-,+,+	RABEP2,CD19,CD19	-6079,552,552
chr15:95399801-95400026	chr15	+	95399974	95400064	True	NM_001159644,NR_034095	chr15,chr15	+,-	MCTP2,LOC400456	-500861,470315
chr4:2244058-2244320	chr4	+	2244173	2244309	True	NM_001193282,NM_024511	chr4,chr4	+,-	LOC402160,HAUS3	176391,-313
chr22:21057297-21057681	chr22	+	21057351	21057441	True	NM_002650,NR_026815	chr22,chr22	-,+	PI4KA,TMEM191A	31564,-2000
chr22:21057297-21057681	chr22	+	20378909	20378991	False	NR_003563,NR_026919	chr22,chr22	-,+	PI4KAP1,LOC150197	19754,-185105
chr22:21057297-21057681	chr22	+	21822661	21822741	False	NM_015094,NR_003700	chr22,chr22	+,-	HIC2,PI4KAP2	-51019,49089
chr22:50523687-50524262	chr22	+	50523692	50524248	True	NM_139202,NM_018995,NM_015166,NM_001164105,NM_001164104	chr22,chr22,chr22,chr22,chr22	-,+,-,+,+	MLC1,MOV10L1,MLC1,MOV10L1,MOV10L1	45,4186,160,4436,4186
chr17:46705341-46705572	chr17	+	46705469	46705533	True	NM_024017,NR_033205,NR_029582	chr17,chr17,chr17	-,+,-	HOXB9,LOC404266,MIR196A1	-1634,-32200,4438
chr8:37887817-37888095	chr8	+	37887846	37888100	True	NM_000025,NM_004095	chr8,chr8	-,+	ADRB3,EIF4EBP1	-63662,-65
chr17:7833351-7833932	chr17	+	7833363	7833933	True	NM_053051,NR_030697,NM_001166621,NR_030684,NM_004732,NM_001037144,NM_021210	chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,-,-,+,-	CNTROB,TRAPPC1,TRAPPC1,TRAPPC1,KCNAB3,CNTROB,TRAPPC1	1539,1434,1434,1384,-610,1539,1384
chr21:44750981-44751205	chr21	+	44750981	44751061	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	118842,95991
chr11:105884744-105885959	chr11	+	105884763	105885955	True	NM_032424,NM_015423	chr11,chr11	-,+	KIAA1826,AASDHPPT	7057,62336
chrX:130941642-130942944	chrX	+	130941766	130943005	True	NM_001042453,NR_026975	chrX,chrX	+,-	MST4,LOC286467	214239,21729
chr16:793443-793660	chr16	+	793543	793655	True	NM_032304,NM_022493	chr16,chr16	+,-	HAGHL,NARFL	-16336,-2546
chr20:37437598-37437941	chr20	+	37437695	37437794	True	NM_001172735,NR_027241,NM_015568	chr20,chr20,chr20	+,-,+	PPP1R16B,LOC388796,PPP1R16B	-3398,-373677,-3398
chr8:124085642-124086084	chr8	+	124085786	124085887	True	NM_001145088,NM_024295,NM_145647	chr8,chr8,chr8	+,-,+	WDR67,DERL1,WDR67	-917,-31138,-917
chr8:118167638-118168319	chr8	+	118167638	118168176	True	NM_173851,NM_006265	chr8,chr8	+,-	SLC30A8,RAD21	-20352,-280533
chrX:3264872-3265095	chrX	+	3264987	3265131	True	NM_004042,NM_015419	chrX,chrX	+,-	ARSF,MXRA5	-280198,-303
chr7:129008128-129008652	chr7	+	129008141	129008566	True	NM_001130722,NM_001130723,NR_034053	chr7,chr7,chr7	+,+,-	AHCYL2,AHCYL2,TNPO3	6917,-228,-312914
chr20:36927335-36927619	chr20	+	36927334	36927572	True	NM_001725,NM_001029864	chr20,chr20	+,-	BPI,KIAA1755	4979,-38160
chr16:2015326-2015972	chr16	+	2015458	2016018	True	NR_003142,NM_174903,NM_002952,NR_002327,NR_002326,NM_006453,NR_003020,NM_004548	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,-,-,-,+,+,+	SNHG9,RNF151,RPS2,SNORA10,SNORA64,TBL3,SNORA78,NDUFB10	-513,856,-631,-2991,-2351,6045,-325,-5993
chr16:57406455-57406660	chr16	+	57406470	57406540	True	NM_020313,NM_002996	chr16,chr16	-,+	CIAPIN1,CX3CL1	74879,-107
chr2:233271152-233271780	chr2	+	233271233	233271603	True	NM_031313,NR_028501	chr2,chr2	+,-	ALPPL2,ECEL1P2	-42,-19479
chr8:59336291-59337535	chr8	+	59336438	59337545	True	NM_000780,NM_001077619	chr8,chr8	-,+	CYP7A1,UBXN2B	75226,-12667
chr11:101915307-101915768	chr11	+	101915322	101915717	True	NM_178127,NM_032930,NM_001195005	chr11,chr11,chr11	-,+,+	ANGPTL5,C11orf70,C11orf70	-128069,2451,2451
chr3:129389273-129389735	chr3	+	129389277	129389729	True	NM_153833,NR_033361	chr3,chr3	+,-	H1FOO,TMCC1	-127271,17896
chr2:36931158-36932022	chr2	+	36931409	36932057	True	NM_053276,NM_005102,NM_001177972,NM_001177970,NM_001177971,NM_001177969	chr2,chr2,chr2,chr2,chr2,chr2	+,-,+,+,+,+	VIT,FEZ2,VIT,VIT,VIT,VIT	-7639,-106077,-7639,-7639,-7639,-7639
chrX:117477941-117479261	chrX	+	117478007	117479301	True	NM_019045,NM_001168301,NM_001184966,NM_001184965	chrX,chrX,chrX,chrX	+,-,+,+	WDR44,KLHL13,WDR44,WDR44	734,-226704,734,734
chr17:56565945-56566497	chr17	+	56565992	56566502	True	NM_001080439,NM_002876	chr17,chr17	-,+	HSF5,RAD51C	-233,203460
chr17:20948397-20950014	chr17	+	20948758	20949926	True	NM_015276,NM_015510	chr17,chr17	-,+	USP22,DHRS7B	-2406,80331
chr14:24689065-24690529	chr14	+	24689314	24690325	True	NM_014169,NM_001199821,NM_001199822,NM_138476,NM_001002000	chr14,chr14,chr14,chr14,chr14	-,-,-,-,+	CHMP4A,MDP1,MDP1,MDP1,GMPR2	-6278,-4038,-4038,-4038,11322
chr19:43357412-43358188	chr19	+	43357656	43358194	True	NR_026824,NR_036584	chr19,chr19	-,+	PSG10P,LOC100289650	1726,-31692
chr5:1296374-1296740	chr5	+	1296428	1296778	True	NM_182632,NM_001193376,NM_198253	chr5,chr5,chr5	+,-,-	SLC6A18,TERT,TERT	-71009,-1266,-1266
chr11:65488885-65490364	chr11	+	65489048	65490106	True	NM_182709,NM_006388,NM_182710,NM_032193	chr11,chr11,chr11,chr11	+,+,+,-	KAT5,KAT5,KAT5,RNASEH2C	-9616,-9616,-9616,-639
chr17:6754219-6755641	chr17	+	6754322	6755406	True	NM_053285,NR_002710	chr17,chr17	-,+	TEKT1,ALOX12P2	-19262,1488
chr11:1854446-1856023	chr11	+	1854554	1855732	True	NM_001145829,NR_036185,NM_138567,NM_001145841,NM_003282	chr11,chr11,chr11,chr11,chr11	+,-,+,+,+	TNNI2,MIR4298,SYT8,TNNI2,TNNI2	4986,25084,-59,5699,4500
chr17:9937919-9938697	chr17	+	9937990	9938746	True	NM_004246,NM_201432,NM_001130831	chr17,chr17,chr17	+,-,-	GLP2R,GAS7,GAS7	-208660,1368,-8367
chr13:48886000-48887975	chr13	+	48886264	48887739	True	NM_000321,NM_001162498	chr13,chr13	+,-	RB1,LPAR6	-8445,99967
chr5:94728922-94730104	chr5	+	94729032	94730110	True	NM_024717,NM_152548	chr5,chr5	-,+	MCTP1,FAM81B	-108753,-2048
chr11:3015733-3016420	chr11	+	3015833	3016461	True	NM_005969,NM_002555	chr11,chr11	-,+	NAP1L4,SLC22A18	-2226,-92377
chr7:43908917-43909345	chr7	+	43909141	43909394	True	NM_032014,NM_015983	chr7,chr7	-,+	MRPS24,UBE2D4	4,56640
chr13:28519246-28520183	chr13	+	28519352	28520222	True	NR_002162,NM_001265	chr13,chr13	+,-	ATP5EP2,CDX2	-60,23146
chr11:17024908-17025405	chr11	+	17024912	17025440	True	NM_175058,NM_014267	chr11,chr11	-,+	PLEKHA7,C11orf58	10573,-264815
chr12:53346009-53346565	chr12	+	53346309	53346525	True	NM_199187,NM_000224,NM_002273	chr12,chr12,chr12	+,+,-	KRT18,KRT18,KRT8	-3713,-3525,-47441
chr22:42467018-42467275	chr22	+	42467083	42467249	True	NM_000262,NM_001002034,NM_033318	chr22,chr22,chr22	-,+,+	NAGA,FAM109B,C22orf32	-237,3005,8449
chr11:67121243-67121479	chr11	+	67121252	67121414	True	NM_021173,NR_024469	chr11,chr11	-,+	POLD4,LOC100130987	-200,-35993
chr13:111766233-111766617	chr13	+	111766245	111766633	True	NM_001113512,NM_145735,NM_001113511,NM_017664	chr13,chr13,chr13,chr13	+,+,+,-	ARHGEF7,ARHGEF7,ARHGEF7,ANKRD10	990,990,990,-198829
chr17:45333079-45333298	chr17	+	45333080	45333334	True	NM_000212,NM_001256	chr17,chr17	+,-	ITGB3,CDC27	-1925,-66415
chr12:110940973-110941993	chr12	+	110941072	110941929	True	NM_016226,NM_152442,NM_057180	chr12,chr12,chr12	-,+,-	VPS29,RAD9B,VPS29	-1156,-1124,-1156
chr11:10564027-10565390	chr11	+	10564026	10565365	True	NM_016422,NR_034093,NR_034094	chr11,chr11,chr11	-,+,+	RNF141,LOC100129827,LOC100129827	-1252,-1251,-1294
chr12:123716584-123716789	chr12	+	123716673	123716831	True	NM_001143905,NM_001194995,NM_022782,NM_152269	chr12,chr12,chr12,chr12	+,+,-,+	C12orf65,C12orf65,MPHOSPH9,C12orf65	1459,1196,-10232,1012
chr16:71748320-71749194	chr16	+	71748376	71748990	True	NM_015020,NM_001017967	chr16,chr16	-,+	PHLPP2,MARVELD3	-14,-88357
chr5:33443138-33443689	chr5	+	33443138	33443418	True	NM_152295,NM_030955	chr5,chr5	+,-	TARS,ADAMTS12	-2294,448760
chrX:39955941-39956204	chrX	+	39955980	39956198	True	NM_005765,NM_001123385,NM_017745	chrX,chrX,chrX	+,-,-	ATP6AP2,BCOR,BCOR	484017,571,571
chr14:48143239-48143493	chr14	+	48143364	48143520	True	NR_037792,NM_001113498	chr14,chr14	+,-	LRR1,MDGA2	1921894,687
chr11:24522442-24524088	chr11	+	24522441	24523688	True	NM_001009909,NM_001195637	chr11,chr11	+,-	LUZP2,LOC100500938	-3940,-1640469
chr21:37431156-37431840	chr21	+	37431370	37431500	True	NM_017438,NM_001007259,NM_001757	chr21,chr21,chr21	-,-,+	SETD4,SETD4,CBR1	1376,1171,10784
chr17:3865425-3866165	chr17	+	3865456	3866134	True	NM_174958,NM_144611,NM_174953,NM_174955,NM_174954,NM_174957,NM_174956,NM_005173	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,-,-,-,-,-,-	ATP2A3,CYB5D2,ATP2A3,ATP2A3,ATP2A3,ATP2A3,ATP2A3,ATP2A3	1652,180327,1652,1652,1652,1652,1652,1652
chr14:64005264-64006697	chr14	+	64005861	64006421	True	NM_006246,NM_015180	chr14,chr14	-,+	PPP2R5E,SYNE2	3708,313261
chr22:45810822-45812432	chr22	+	45810832	45812334	True	NM_015653,NM_148674	chr22,chr22	+,-	RIBC2,SMC1B	-1322,-1332
chr15:90117299-90117541	chr15	+	90117299	90117603	True	NM_152259,NR_027077	chr15,chr15	+,-	C15orf42,LOC283761	1214,-50034
chr19:42788849-42789063	chr19	+	42788880	42789100	True	NM_015125,NM_002573	chr19,chr19	+,-	CIC,PAFAH1B3	-114,17746
chr1:46927403-46928584	chr1	+	46927466	46928324	True	NM_147192,NM_001097611	chr1,chr1	+,-	DMBX1,KNCN	44343,88613
chr2:85889886-85890541	chr2	+	85889993	85890569	True	NM_000542,NM_198843,NM_006433	chr2,chr2,chr2	-,-,+	SFTPB,SFTPB,GNLY	5345,5345,30844
chr1:27284917-27286091	chr1	+	27284971	27285937	True	NM_001013642,NM_152365	chr1,chr1	+,-	TRNP1,C1orf172	34257,1014
chr1:216538902-216539675	chr1	+	216538943	216539692	True	NM_206933,NM_016121	chr1,chr1	-,+	USH2A,KCTD3	57107,-798271
chr7:142634339-142634821	chr7	+	142634389	142634839	True	NM_019841,NM_178829	chr7,chr7	-,+	TRPV5,C7orf34	-3569,1763
chr8:144416516-144416738	chr8	+	144416530	144416640	True	NM_052963,NM_052924	chr8,chr8	-,+	TOP1MT,RHPN1	460,34384
chr6:99798769-99799468	chr6	+	99798808	99799274	True	NM_032511,NM_001195131	chr6,chr6	-,+	C6orf168,LOC100130890	-1277,169595
chr19:34662327-34662856	chr19	+	34662489	34662848	True	NM_001114093,NM_015578,NR_027620	chr19,chr19,chr19	+,+,-	LSM14A,LSM14A,LOC643719	503,503,405805
chr18:43917024-43917449	chr18	+	43917238	43917466	True	NM_001173129,NM_152470	chr18,chr18	-,+	LOXHD1,RNF165	181633,-3108
chr19:56636399-56636929	chr19	+	56636617	56636881	True	NM_001002836,NM_018337	chr19,chr19	-,+	ZNF787,ZNF444	-3968,15674
chr12:128036209-128038063	chr12	+	128036261	128037757	True	NR_033970,NR_033987	chr12,chr12	-,+	LOC440117,FLJ37505	-677025,328404
chr1:70309566-70310355	chr1	+	70309671	70310184	True	NM_017768,NR_023916	chr1,chr1	-,+	LRRC40,PIN1P1	361227,74820
chr6:45933219-45934708	chr6	+	45933246	45934589	True	NM_016929,NM_014936	chr6,chr6	-,+	CLIC5,ENPP4	49059,163111
chr1:146072076-146072938	chr1	+	146072279	146072761	True	NM_001101663,NM_001097616,NM_183372	chr1,chr1,chr1	-,+,-	NBPF24,GPR89C,NBPF11	-4034,-188462,9932
chr1:146072076-146072938	chr1	-	146379967	146380035	False	NR_024442,NR_002305	chr1,chr1	-,+	LOC728989,PDIA3P	134623,269394
chr1:146072076-146072938	chr1	+	147614115	147614597	False	NM_001101663,NM_001097616,NM_183372	chr1,chr1,chr1	-,+,-	NBPF24,GPR89C,NBPF11	-4034,-188599,9932
chr17:21517461-21517916	chr17	+	21517609	21517903	True	NM_001113434,NM_001194958	chr17,chr17	-,+	C17orf51,KCNJ18	-62668,-209212
chr7:114187479-114187736	chr7	+	114187478	114187550	True	NM_002711,NR_037439	chr7,chr7	-,+	PPP1R3A,MIR3666	-628396,105849
chr19:50029296-50029791	chr19	+	50029362	50029604	True	NM_020650,NR_029703	chr19,chr19	+,-	RCN3,MIR150	1270,-25237
chr15:30685640-30685878	chr15	+	30685757	30685837	True	NM_148911,NM_139320,NR_026858	chr15,chr15,chr15	-,-,+	CHRFAM7A,CHRFAM7A,FAM7A1	77,77,178920
chr15:30685640-30685878	chr15	+	32727091	32727171	False	NR_027470,NR_026859,NR_026858,NM_199357	chr15,chr15,chr15,chr15	-,-,-,+	FAM7A2,FAM7A3,FAM7A1,ARHGAP11A	129,-26,129,180519
chr15:30685640-30685878	chr15	-	30395828	30395908	False	NR_026859,NM_175610	chr15,chr15	+,-	FAM7A3,TJP1	26,-281122
chr15:30685640-30685878	chr15	-	30864836	30864916	False	NR_027470,NM_148911,NR_026858	chr15,chr15,chr15	+,-,+	FAM7A2,CHRFAM7A,FAM7A1	-129,-178972,-129
chr7:73184203-73184404	chr7	+	73184221	73184323	True	NM_001306,NR_026690	chr7,chr7	-,+	CLDN3,WBSCR26	327,-34873
chr3:127545282-127546163	chr3	+	127545412	127546064	True	NM_207335,NM_001003794,NM_007283	chr3,chr3,chr3	+,-,-	KBTBD12,MGLL,MGLL	95837,-3361,-3711
chr17:56770180-56770636	chr17	+	56770258	56770534	True	NM_001201457,NM_198393,NM_031272,NM_058216,NM_002876	chr17,chr17,chr17,chr17,chr17	-,-,-,+,+	TEX14,TEX14,TEX14,RAD51C,RAD51C	-842,-842,-842,-346,-346
chr3:142840273-142840618	chr3	+	142840300	142840608	True	NM_004267,NR_034032	chr3,chr3	+,-	CHST2,LOC100289361	-1683,-119991
chr22:44320448-44320686	chr22	+	44320456	44320526	True	NM_025225,NM_138814	chr22,chr22	+,-	PNPLA3,PNPLA5	-888,-32563
chr2:27294181-27294477	chr2	+	27294223	27294521	True	NM_007046,NM_001134693	chr2,chr2	+,-	EMILIN1,OST4	6913,96
chr1:249210467-249211039	chr1	+	249210625	249210933	True	NM_001193328,NM_001017434	chr1,chr1	-,+	ZNF692,PGBD2	-57310,-10241
chr15:44068416-44068620	chr15	+	44068420	44068624	True	NM_001199877,NM_025165	chr15,chr15	+,-	SERF2,ELL3	669,928
chr15:45926814-45927024	chr15	+	45926813	45926931	True	NM_021199,NM_013309	chr15,chr15	+,-	SQRDL,SLC30A4	324,-111811
chr17:27540645-27541252	chr17	+	27540829	27541309	True	NM_203318,NM_005208	chr17,chr17	-,+	MYO18A,CRYBA1	-33422,32565
chr11:61063213-61063808	chr11	+	61063378	61063754	True	NM_015533,NM_152718	chr11,chr11	+,-	DAK,VWCE	36899,-590
chr1:65885675-65885963	chr1	+	65885705	65885847	True	NM_001198683,NM_001198681,NM_017526,NR_029516,NM_001003680,NM_001003679,NM_002303	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,-,+,+,+	LEPROT,LEPROT,LEPROT,MIR101-1,LEPR,LEPR,LEPR	283,551,283,-361514,487,487,487
chr8:124286026-124286264	chr8	+	124286025	124286191	True	NR_037874,NR_037873,NM_001204180,NM_007222,NM_207006,NM_001017926	chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,+,-	ZHX1,ZHX1,ZHX1-C8ORF76,ZHX1,FAM83A,ZHX1	586,1640,586,586,-91324,586
chr3:42631449-42632206	chr3	+	42631453	42632201	True	NM_016305,NM_004206,NM_032970,NM_005385,NM_001201584	chr3,chr3,chr3,chr3,chr3	+,-,-,+,-	SS18L2,SEC22C,SEC22C,NKTR,SEC22C	96,-7933,-7933,9945,-7933
chr16:81822713-81823187	chr16	+	81822757	81822905	True	NM_002661,NM_145168	chr16,chr16	+,-	PLCG2,SDR42E1	-9885,222238
chr18:33779856-33781107	chr18	+	33779915	33781029	True	NM_017947,NM_001099406	chr18,chr18	+,-	MOCOS,SLC39A6	-12486,-70558
chr1:243422563-243423461	chr1	+	243423278	243423478	True	NM_006642,NM_001042405,NM_001042404,NM_014812	chr1,chr1,chr1,chr1	+,-,-,-	SDCCAG8,CEP170,CEP170,CEP170	-4022,-4570,-4570,-4570
chr3:10546125-10546591	chr3	+	10546128	10546614	True	NM_001683,NR_024146,NM_001001331	chr3,chr3,chr3	-,+,-	ATP2B2,GHRLOS,ATP2B2	704,-218741,704
chr17:74350013-74350323	chr17	+	74350018	74350302	True	NM_002766,NM_001142601	chr17,chr17	-,+	PRPSAP1,SPHK1	-4,30387
chr19:34014840-34015164	chr19	+	34014896	34015184	True	NM_001166057,NM_000285,NM_001166056,NM_001127895	chr19,chr19,chr19,chr19	-,-,-,+	PEPD,PEPD,PEPD,CHST8	-2097,-2097,-2097,97676
chr3:135745754-135746013	chr3	+	135745766	135745883	True	NM_181897,NM_001145417	chr3,chr3	+,-	PPP2R3A,MSL2	-4247,167486
chr22:30114600-30114858	chr22	+	30114620	30114906	True	NM_001003692,NM_182527	chr22,chr22	-,+	ZMAT5,CABP7	48113,1437
chr19:9212801-9213855	chr19	+	9212896	9213709	True	NM_001005193,NM_001004456	chr19,chr19	-,+	OR7G2,OR1M1	324,-9027
chr16:77758204-77759468	chr16	+	77758600	77759496	True	NR_024154,NM_001105663,NM_199355	chr16,chr16,chr16	+,+,-	NUDT7,NUDT7,ADAMTS18	-2246,-2246,-289589
chr10:43761011-43761259	chr10	+	43761040	43761194	True	NM_001184963,NM_145313	chr10,chr10	+,-	FXYD4,RASGEF1A	105897,1223
chr5:18731655-18733017	chr5	+	18732117	18733037	True	NM_001167667,NM_006317	chr5,chr5	-,+	CDH18,BASP1	1255366,-1514426
chr3:160812624-160812913	chr3	+	160812695	160812958	True	NM_015938,NM_033169	chr3,chr3	+,-	NMD3,B3GALNT1	126140,9775
chr16:14411389-14411889	chr16	+	14411479	14411717	True	NR_029854,NM_001134477	chr16,chr16	+,-	MIR365-1,PARN	-8388,312453
chr1:235668598-235669791	chr1	+	235669535	235669756	True	NM_003193,NM_152490	chr1,chr1	+,-	TBCE,B3GALNT2	-138869,-1754
chr2:229369118-229370325	chr2	+	229369237	229370176	True	NM_178821,NM_030623	chr2,chr2	+,-	WDR69,SPHKAP	-632969,-322876
chr12:100562217-100562818	chr12	+	100562266	100562856	True	NR_036632,NR_024261,NR_031728	chr12,chr12,chr12	-,-,+	GOLGA2B,GOLGA2B,MIR1827	4315,4315,20805
chr13:113302516-113302717	chr13	+	113302518	113302590	True	NM_207440,NM_006322	chr13,chr13	+,-	C13orf35,TUBGCP3	-1211,-60037
chr14:68084965-68086095	chr14	+	68085015	68086121	True	NM_001172,NM_004569	chr14,chr14	+,-	ARG2,PIGH	457,-17998
chr12:113573023-113573396	chr12	+	113573172	113573442	True	NM_001144872,NM_004658,NM_001193521,NM_001193520	chr12,chr12,chr12,chr12	+,-,-,-	CCDC42B,RASAL1,RASAL1,RASAL1	14220,652,167,652
chr13:108514054-108515204	chr13	+	108514210	108515233	True	NM_032859,NM_001080396	chr13,chr13	+,-	ABHD13,FAM155A	355529,4284
chr5:65018350-65018775	chr5	+	65018544	65018808	True	NM_020726,NM_019072	chr5,chr5	+,-	NLN,SGTB	-579,-603
chr14:45432724-45433413	chr14	+	45432821	45433264	True	NM_017658,NM_015091	chr14,chr14	-,+	KLHL28,FAM179B	-1642,-1467
chr10:3828276-3828662	chr10	+	3828318	3828693	True	NM_001160125,NM_001160124,NM_002627,NR_027653,NM_001300	chr10,chr10,chr10,chr10,chr10	-,-,+,-,-	KLF6,KLF6,PFKP,KLF6,KLF6	-845,-845,-718617,-845,-845
chr11:27532325-27534104	chr11	+	27532452	27533959	True	NR_033312,NR_033313,NR_033314,NR_033315,NR_002832,NM_018362	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,-	BDNF-AS1,BDNF-AS1,BDNF-AS1,BDNF-AS1,BDNF-AS1,LIN7C	-4117,-4117,-4117,-4117,-4117,-4126
chr18:29340426-29340823	chr18	+	29340443	29340805	True	NM_001034172,NM_000371	chr18,chr18	-,+	MCART2,TTR	88,-168764
chr10:5449645-5451352	chr10	+	5449828	5451289	True	NM_001047160,NM_001171864,NM_024803	chr10,chr10,chr10	+,-,-	NET1,TUBAL3,TUBAL3	3228,-3035,-3035
chr21:42878478-42879182	chr21	+	42878652	42879148	True	NM_001178046,NM_001135099,NM_005656	chr21,chr21,chr21	+,-,-	MX1,TMPRSS2,TMPRSS2	-80600,894,987
chr1:160065016-160065741	chr1	+	160065079	160065537	True	NM_052868,NM_004983	chr1,chr1	-,+	IGSF8,KCNJ9	2921,-13770
chr11:33258706-33259542	chr11	+	33258719	33259129	True	NM_001033506,NM_001048200	chr11,chr11	-,+	CSTF3,HIPK3	-75682,20038
chr7:29876691-29877693	chr7	+	29877323	29877427	True	NM_001080529,NR_027347	chr7,chr7	+,-	WIPF3,LOC100271874	-3044,-151886
chr11:94135084-94136012	chr11	+	94135179	94135953	True	NM_017704,NM_016540	chr11,chr11	+,-	ANKRD49,GPR83	91199,-594
chr5:1446483-1446724	chr5	+	1446498	1446654	True	NM_182632,NM_001044	chr5,chr5	+,-	SLC6A18,SLC6A3	-221079,-955
chr9:135957714-135958118	chr9	+	135957758	135958090	True	NR_001275,NM_006266	chr9,chr9	+,-	CELP,RALGDS	7,38521
chr9:135957714-135958118	chr9	+	135937200	135937532	False	NM_001807,NM_006266	chr9,chr9	+,-	CEL,RALGDS	12,59079
chr14:39887901-39889620	chr14	+	39888295	39889291	True	NM_203355,NM_203301	chr14,chr14	+,-	CTAGE5,FBXO33	-152025,12471
chr10:74928170-74928791	chr10	+	74928369	74928681	True	NR_024203,NM_173348,NM_007265,NM_001135752,NM_001135753	chr10,chr10,chr10,chr10,chr10	-,+,-,-,-	ECD,FAM149B1,ECD,ECD,ECD	-516,-543,-516,-516,-516
chr9:71790242-71790693	chr9	+	71790321	71790723	True	NM_001170630,NM_201629,NM_002732,NM_004817	chr9,chr9,chr9,chr9	+,+,-,+	TJP2,TJP2,PRKACG,TJP2	-1401,-1401,-161282,-1401
chr17:16895085-16895605	chr17	+	16895115	16895621	True	NM_015134,NM_012452	chr17,chr17	+,-	MPRIP,TNFRSF13B	50485,-19713
chr2:101179194-101179594	chr2	+	101179233	101179553	True	NM_004854,NM_024065	chr2,chr2	-,+	CHST10,PDCL3	-145103,26
chr1:47801231-47802809	chr1	+	47801911	47802601	True	NM_001136140,NM_003035,NM_016308	chr1,chr1,chr1	+,-,+	CMPK1,STIL,CMPK1	-2493,-22092,-2493
chr16:30405003-30405870	chr16	+	30405158	30405899	True	NM_152652,NM_052838	chr16,chr16	+,-	ZNF48,SEPT1	1157,-10987
chr2:74532072-74533116	chr2	+	74532151	74532570	True	NR_024463,NM_021196	chr2,chr2	+,-	LOC100189589,SLC4A5	80274,9633
chr2:231122404-231124112	chr2	+	231122572	231123776	True	NM_001185015,NM_007237	chr2,chr2	-,+	SP110,SP140	-32128,-32178
chr5:141993821-141994873	chr5	+	141994066	141994792	True	NM_001144892,NM_001135608,NM_033137	chr5,chr5,chr5	-,+,-	FGF1,ARHGAP26,FGF1	6167,155499,-340
chr5:87981553-87982572	chr5	+	87981695	87982599	True	NR_024383,NM_022650,NR_015436	chr5,chr5,chr5	-,+,-	LOC645323,RASA1,LOC645323	-7433,-1416980,-1075
chr7:139761781-139762049	chr7	+	139761848	139762088	True	NM_022750,NR_024451	chr7,chr7	-,+	PARP12,LOC100134229	1483,114972
chr19:15593659-15594820	chr19	+	15594312	15594814	True	NM_173483,NM_052890	chr19,chr19	+,-	CYP4F22,PGLYRP2	24521,-3997
chr6:46655261-46655589	chr6	+	46655265	46655623	True	NM_016593,NM_001010870,NM_001168359	chr6,chr6,chr6	-,+,+	CYP39A1,TDRD6,TDRD6	-34742,-12,-12
chr17:4801189-4802299	chr17	+	4801230	4802342	True	NM_000080,NM_001145536	chr17,chr17	-,+	CHRNE,C17orf107	4077,605
chr2:180385520-180386201	chr2	+	180385678	180385807	True	NM_001113398,NM_019091	chr2,chr2	-,+	ZNF385B,PLEKHA3	41569,-1040539
chr12:131439595-131440424	chr12	+	131439886	131440316	True	NM_194356,NM_198827	chr12,chr12	-,+	STX2,GPR133	-116075,-1485
chr14:103672805-103673343	chr14	+	103672874	103673310	True	NR_033938,NM_006291	chr14,chr14	-,+	LOC100131366,TNFAIP2	-17509,-80263
chr17:71308669-71309666	chr17	+	71308773	71309660	True	NM_012121,NM_017941	chr17,chr17	-,+	CDC42EP4,C17orf80	-630,-80048
chr7:134330836-134331487	chr7	+	134330997	134331436	True	NM_001628,NM_001724,NM_199186	chr7,chr7,chr7	-,+,+	AKR1B1,BPGM,BPGM	-187109,94,94
chr5:65225761-65226294	chr5	+	65225762	65226143	True	NR_028474,NM_001006600,NM_018695	chr5,chr5,chr5	-,+,+	LOC100303749,ERBB2IP,ERBB2IP	15319,-3433,-3433
chr13:80090479-80091655	chr13	+	80090665	80091671	True	NM_019080,NM_022118	chr13,chr13	+,-	NDFIP2,RBM26	-35474,-110742
chr8:37305220-37305718	chr8	+	37305299	37305676	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	247624,299938
chr19:51108249-51108787	chr19	+	51108255	51108780	True	NR_004384,NM_032298	chr19,chr19	+,-	SNAR-F,SYT3	-86,32572
chr19:51108249-51108787	chr19	+	51106836	51106886	False	NR_004384,NM_032298	chr19,chr19	+,-	SNAR-F,SYT3	1333,34466
chr9:133590906-133591641	chr9	+	133590957	133591386	True	NM_007313,NR_027440	chr9,chr9	+,-	ABL1,LOC100272217	-1748,-136076
chr1:207492459-207494351	chr1	+	207492489	207494368	True	NM_000574,NM_001114752,NM_018566	chr1,chr1,chr1	+,+,-	CD55,CD55,YOD1	448,448,-268067
chr17:43337392-43338159	chr17	+	43337616	43338166	True	NR_024435,NM_152343	chr17,chr17	+,-	LOC100133991,C17orf46	1391,1363
chr6:117150076-117151404	chr6	+	117150197	117151141	True	NM_148963,NM_173560	chr6,chr6	-,+	GPRC6A,RFX6	1,47234
chr18:5894233-5894677	chr18	+	5894235	5894619	True	NM_001080209,NR_015389	chr18,chr18	-,+	TMEM200C,LOC339290	-2132,-656192
chr1:226596377-226597219	chr1	+	226596457	226597167	True	NM_001618,NM_001003665	chr1,chr1	-,+	PARP1,C1orf95	-656,139333
chr3:186388427-186389443	chr3	+	186388724	186389491	True	NM_000412,NM_001134415	chr3,chr3	+,-	HRG,TBCCD1	-4984,-100392
chr12:6677706-6677953	chr12	+	6677709	6677821	True	NM_002046,NM_001033714,NM_006170	chr12,chr12,chr12	+,-,-	GAPDH,NOP2,NOP2	-34103,-229,-229
chr2:218941166-218942311	chr2	+	218941297	218942287	True	NM_198483,NR_002712	chr2,chr2	+,-	RUFY4,CXCR2P1	-7610,-15284
chr18:9136249-9136467	chr18	+	9136262	9136458	True	NM_001204056,NM_001083625,NM_001042388,NM_015208	chr18,chr18,chr18,chr18	+,+,-,+	ANKRD12,ANKRD12,PPP4R1,ANKRD12	1102,292,478192,292
chr6:7394521-7395494	chr6	+	7394753	7395323	True	NM_205864,NM_031480,NM_001170692,NM_001170693,NM_153005	chr6,chr6,chr6,chr6,chr6	-,+,-,-,+	CAGE1,RIOK1,CAGE1,CAGE1,RIOK1	-4811,-4755,-4811,-4811,7556
chr6:131918538-131919280	chr6	+	131918695	131919325	True	NM_015979,NM_000045	chr6,chr6	-,+	MED23,ARG1	30095,-24387
chr19:46494261-46496023	chr19	+	46494620	46495946	True	NM_002516,NM_001080402	chr19,chr19	-,+	NOVA2,CCDC61	-17963,2392
chr13:43148503-43148767	chr13	+	43148608	43148798	True	NM_003701,NM_001002264	chr13,chr13	+,-	TNFSF11,EPSTI1	-368,417629
chr1:33334002-33334833	chr1	+	33334060	33334786	True	NM_001171941,NM_001171940,NM_153756,NM_002143	chr1,chr1,chr1,chr1	-,-,-,+	FNDC5,FNDC5,FNDC5,HPCA	3346,1678,1678,17311
chr19:39467734-39468484	chr19	+	39467936	39468288	True	NM_024907,NM_033363	chr19,chr19	-,+	FBXO17,MRPS12	-1556,-46393
chr11:57423921-57424887	chr11	+	57423953	57424671	True	NM_145008,NM_006831,NM_001142597	chr11,chr11,chr11	-,+,+	YPEL4,CLP1,CLP1	-6536,544,544
chr6:14739345-14740219	chr6	+	14739348	14740206	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	506320,923133
chr4:10118650-10118894	chr4	+	10118675	10118893	True	NM_005112,NM_017491,NM_000798	chr4,chr4,chr4	-,-,+	WDR1,WDR1,DRD5	-102,-102,-335468
chr11:1409221-1409933	chr11	+	1409223	1409791	True	NM_019009,NM_003957	chr11,chr11	-,+	TOLLIP,BRSK2	-78331,1337
chr10:28288054-28288412	chr10	+	28288089	28288440	True	NM_021252,NM_018076	chr10,chr10	+,-	RAB18,ARMC4	-494891,-112
chr14:60977892-60978131	chr14	+	60977924	60978088	True	NM_007374,NM_174978	chr14,chr14	+,-	SIX6,C14orf39	-2037,-25160
chr2:202095631-202096969	chr2	+	202095821	202096956	True	NM_001080124,NM_033355,NM_001127391,NM_001228,NM_033358	chr2,chr2,chr2,chr2,chr2	+,+,-,+,+	CASP8,CASP8,ALS2CR12,CASP8,CASP8	1209,1209,125196,1209,1209
chr14:31100481-31101016	chr14	+	31100608	31100970	True	NM_016106,NR_030354,NM_182835	chr14,chr14,chr14	+,-,+	SCFD1,MIR624,SCFD1	-9147,383033,-9147
chr11:77299127-77299595	chr11	+	77299371	77299460	True	NM_173039,NM_001293	chr11,chr11	+,-	AQP11,CLNS1A	1219,49448
chr17:76616558-76617538	chr17	+	76616958	76617533	True	NM_173628,NM_024419	chr17,chr17	-,+	DNAH17,PGS1	-43482,-242276
chr12:102214249-102215911	chr12	+	102214493	102215810	True	NM_018370,NM_024312	chr12,chr12	+,-	DRAM1,GNPTAB	55294,8892
chr2:20101218-20101429	chr2	+	20101221	20101397	True	NR_033875,NM_001008237	chr2,chr2	+,-	FLJ12334,TTC32	-32657,397
chr3:178971516-178972759	chr3	+	178971679	178972680	True	NM_016331,NR_028135,NM_171829,NM_171830,NM_014407	chr3,chr3,chr3,chr3,chr3	+,-,-,-,-	ZNF639,KCNMB3,KCNMB3,KCNMB3,KCNMB3	68870,5062,5062,-2034,-2276
chr20:1368859-1369549	chr20	+	1368894	1369566	True	NR_037661,NM_000801,NM_014723,NM_054014,NM_001199786	chr20,chr20,chr20,chr20,chr20	-,-,+,-,-	FKBP1A-SDCBP2,FKBP1A,SNPH,FKBP1A,FKBP1A	4300,4300,-121998,4300,4300
chr11:94707040-94707848	chr11	+	94707052	94707872	True	NM_016403,NM_018039	chr11,chr11	-,+	CWC15,KDM4D	-276,-259
chr17:62831514-62832136	chr17_ctg5_hap1	+	181666	181918	False	NM_014798,NR_027774,NR_027782,NM_001113738	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	-,-,-,+	PLEKHM1,PLEKHM1,PLEKHM1,ARL17A	1346,1346,1346,13802
chr17:62831514-62832136	chr17	+	62831561	62832121	True	NR_024386,NM_001165933	chr17,chr17	-,+	PLEKHM1P,RGS9	1231,301334
chr17:62831514-62832136	chr17	-	45146992	45147043	False	NM_203400,NM_001002841	chr17,chr17	-,+	RPRML,MYL4	-90378,139384
chr17:62831514-62832136	chr17	+	43566598	43566850	False	NR_037772,NM_014798,NR_027774,NR_027782	chr17,chr17,chr17,chr17	+,-,-,-	CRHR1,PLEKHM1,PLEKHM1,PLEKHM1	130859,1346,1346,1346
chr11:62065285-62066154	chr11	+	62065286	62065860	True	NM_002411,NM_206998	chr11,chr11	+,-	SCGB2A2,SCGB1D4	-27707,726
chr17:73080470-73081540	chr17	+	73080472	73081119	True	NM_006356,NM_004695	chr17,chr17	-,+	ATP5H,SLC16A5	-37398,2935
chr19:49376424-49377038	chr19	+	49376611	49377059	True	NM_020904,NM_014330,NM_001161354	chr19,chr19,chr19	-,+,-	PLEKHA4,PPP1R15A,PLEKHA4	-4727,-1013,-4727
chr17:26901388-26902293	chr17	+	26901516	26902274	True	NM_003593,NM_005165,NM_033198	chr17,chr17,chr17	+,-,-	FOXN1,ALDOC,PIGS	-50609,1727,-2629
chr16:8962473-8962680	chr16	+	8962554	8962720	True	NM_014316,NM_001042476,NM_000303	chr16,chr16,chr16	-,-,+	CARHSP1,CARHSP1,PMM2	193,-306,-70935
chr15:41131338-41131946	chr15	+	41131690	41131806	True	NM_017726,NM_003710,NM_181642,NM_001032367	chr15,chr15,chr15,chr15	-,+,+,+	PPP1R14D,SPINT1,SPINT1,SPINT1	-10783,4439,4439,4836
chr6:116990871-116991445	chr6	+	116991005	116991136	True	NM_145062,NM_002269	chr6,chr6	-,+	ZUFSP,KPNA5	-1032,11230
chr3:186917214-186917614	chr3	+	186917263	186917653	True	NM_052969,NM_153708	chr3,chr3	-,+	RPL39L,RTP1	-60000,-2040
chr9:46382781-46383447	chr9	+	46383403	46383473	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2752673,304092
chr9:46382781-46383447	chr9	+	67782652	67782709	False	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	11537,144051
chr9:46382781-46383447	chr9	-	45001701	45001758	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-11523,-1370971
chr9:46382781-46383447	chr9	-	45737126	45737183	False	NM_001145196,NR_024060	chr9,chr9	-,+	FAM75A6,FAM27A	-2106396,-10155
chr9:46382781-46383447	chr9	-	46120852	46120909	False	NM_001145196,NR_024060	chr9,chr9	-,+	FAM75A6,FAM27A	-2490122,-393881
chr11:124927976-124928467	chr11	+	124927976	124928506	True	NM_198277,NM_001080546,NM_001145290	chr11,chr11,chr11	+,-,+	SLC37A2,TMEM218,SLC37A2	4506,44749,4506
chr18:39098744-39099439	chr18	+	39098880	39099480	True	NM_002647,NR_002838	chr18,chr18	+,-	PIK3C3,KC6	435718,1132
chr4:6709638-6711265	chr4	+	6709935	6711265	True	NM_203462,NM_018366	chr4,chr4	-,+	MRFAP1L1,CNO	391,6576
chr9:75531094-75531616	chr9	+	75531139	75531653	True	NM_000700,NM_000689	chr9,chr9	+,-	ANXA1,ALDH1A1	235127,36630
chr16:3116637-3116909	chr16	+	3116651	3116829	True	NM_032805,NM_004221,NM_001012718,NM_001012636,NM_001012635,NM_001012634,NM_001012633,NM_001012632,NM_001012631	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	-,+,+,+,+,+,+,+,+	ZSCAN10,IL32,IL32,IL32,IL32,IL32,IL32,IL32,IL32	26082,-1389,-1389,-917,-1090,-1063,-1389,-1039,-1389
chr12:58139723-58141616	chr12	+	58140013	58141416	True	NM_005981,NM_001122772,NM_014770,NM_138396,NM_000075	chr12,chr12,chr12,chr12,chr12	+,-,-,+,-	TSPAN31,AGAP2,AGAP2,MARCH9,CDK4	-1284,-7984,-4073,7483,4798
chr6:35745073-35745302	chr6	+	35745111	35745319	True	NM_001010886,NM_207409,NM_001832	chr6,chr6,chr6	+,+,-	C6orf127,C6orf126,CLPS	3511,-770,19833
chr11:8177045-8177475	chr11	+	8177205	8177515	True	NM_177972,NM_001135109	chr11,chr11	+,-	TUB,RIC3	-74359,13125
chr1:6485378-6485590	chr1	+	6485568	6485628	True	NM_019089,NR_036218,NM_031475	chr1,chr1,chr1	-,-,+	HES2,MIR4252,ESPN	-5589,4378,-771
chr20:306656-306880	chr20	+	306681	306911	True	NM_153269,NM_006943	chr20,chr20	-,+	C20orf96,SOX12	-35291,-493
chr1:120929337-120930428	chr1	+	120929614	120930442	True	NM_001004340,NR_027337,NM_001017986	chr1,chr1,chr1	-,+,-	FCGR1B,HIST2H2BA,FCGR1B	5552,-23631,5552
chr1:120929337-120930428	chr1	-	149760088	149760138	False	NM_001161334,NM_000566	chr1,chr1	-,+	HIST2H2BF,FCGR1A	23840,-5889
chr19:45661969-45662230	chr19	+	45661974	45662070	True	NM_212550,NM_198478	chr19,chr19	+,-	BLOC1S3,NKPD1	19932,1388
chr19:4245530-4246460	chr19	+	4245668	4246326	True	NM_001169126,NM_018074	chr19,chr19	-,+	TMIGD2,CCDC94	56152,784
chr7:6778247-6778672	chr7	+	6778276	6778472	True	NR_002217,NM_016265	chr7,chr7	+,-	PMS2CL,ZNF12	-3391,-31710
chr7:6778247-6778672	chr7	-	6025479	6025675	False	NM_006303,NM_173565	chr7,chr7	+,-	AIMP2,RSPH10B	23206,-15165
chr2:149631051-149632287	chr2	+	149631154	149632202	True	NM_015702,NM_004522	chr2,chr2	-,+	MMADHC,KIF5C	812178,616
chr10:16857123-16859005	chr10	+	16857266	16858808	True	NM_012425,NM_030664,NM_152724	chr10,chr10,chr10	-,+,-	RSU1,PTER,RSU1	695,-378353,695
chr17:43237107-43238116	chr17	+	43237301	43238116	True	NM_144608,NM_133373	chr17,chr17	+,-	HEXIM2,PLCD3	147,-27410
chr4:8445609-8446390	chr4	+	8445697	8445876	True	NM_152544,NM_001101667,NM_003501	chr4,chr4,chr4	+,-,-	METTL19,ACOX3,ACOX3	-3225,-3245,-3245
chr4:141316185-141317801	chr4	+	141316950	141317518	True	NM_001153663,NR_033939	chr4,chr4	+,-	SCOC,LOC100129858	-22338,-22404
chr7:44796989-44797453	chr7	+	44797008	44797434	True	NM_174929,NM_031449,NM_138635	chr7,chr7,chr7	+,+,-	ZMIZ2,ZMIZ2,H2AFV	-1272,-8529,90341
chr16:54963353-54963872	chr16	+	54963367	54963723	True	NM_005853,NR_034105,NR_034106	chr16,chr16,chr16	+,-,-	IRX5,CRNDE,CRNDE	1387,-288,-677
chr2:170440322-170440855	chr2	+	170440369	170440755	True	NM_004792,NM_024622	chr2,chr2	+,-	PPIG,FASTKD1	94,-9945
chr1:43917337-43919125	chr1	+	43917361	43919011	True	NM_001190880,NM_031207,NM_015284	chr1,chr1,chr1	-,-,+	HYI,HYI,KIAA0467	699,699,-28615
chr22:23866962-23867719	chr22	+	23867061	23867629	True	NM_153615,NM_020070	chr22,chr22	+,-	RGL4,IGLL1	165418,54916
chr19:44904899-44905552	chr19	+	44905118	44905590	True	NM_181756,NM_152354	chr19,chr19	+,-	ZNF233,ZNF285	-141094,237
chr2:202482111-202483583	chr2	+	202483481	202483562	True	NM_001168217,NM_001168216,NM_001168221,NM_152525,NM_018571	chr2,chr2,chr2,chr2,chr2	-,-,-,-,+	ALS2CR11,ALS2CR11,ALS2CR11,ALS2CR11,STRADB	394,394,394,394,-167144
chr20:61426805-61427025	chr20	+	61426894	61426964	True	NM_007346,NM_018270,NM_006602	chr20,chr20,chr20	+,+,-	OGFR,C20orf20,TCFL5	9212,840,66201
chr3:52867364-52868600	chr3	+	52867377	52868648	True	NM_002218,NM_001166449,NM_205853,NM_002217	chr3,chr3,chr3,chr3	-,-,-,+	ITIH4,ITIH4,MUSTN1,ITIH3	-2660,-2660,637,-38644
chr8:145438439-145438768	chr8	+	145438460	145438738	True	NM_016458,NM_015201	chr8,chr8	+,-	FAM203A,BOP1	-631,76432
chr8:145438439-145438768	chr8	+	145193252	145193530	False	NM_030974,NM_032450,NM_016458,NM_001099281,NM_001099280	chr8,chr8,chr8,chr8,chr8	-,+,+,+,+	SHARPIN,HEATR7A,FAM203A,HEATR7A,HEATR7A	-34112,9388,-631,9388,9388
chr16:75252146-75252524	chr16	+	75252258	75252546	True	NM_001025200,NM_001906	chr16,chr16	-,+	CTRB2,CTRB1	-11186,337
chr5:141345774-141347171	chr5	+	141346020	141347208	True	NM_183399,NM_183398,NM_001201365,NM_016580,NM_183401,NM_183400,NM_004290	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,-,+,+,+	RNF14,RNF14,RNF14,PCDH12,RNF14,RNF14,RNF14	31,1242,31,-7393,1503,1242,1242
chr2:191224205-191224842	chr2	+	191224368	191224856	True	NM_198047,NM_002194	chr2,chr2	-,+	HIBCH,INPP1	-39597,-16238
chr1:152635198-152636826	chr1	+	152635198	152636344	True	NM_178430,NM_178431	chr1,chr1	+,-	LCE2D,LCE3A	-157,-39619
chr16:12072705-12073599	chr16	+	12073206	12073404	True	NM_001130007,NM_032167	chr16,chr16	-,+	GSPT1,RUNDC2A	-62687,-2660
chr13:26625436-26625656	chr13	+	26625458	26625671	True	NM_001260,NM_001007538	chr13,chr13	+,-	CDK8,SHISA2	203084,-260
chr7:128046583-128046806	chr7	+	128046664	128046850	True	NM_000883,NM_001142576,NM_001142574,NM_001142575,NM_001142573,NM_183243,NM_001098786,NM_001102605	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,-,+,-	IMPDH1,IMPDH1,IMPDH1,IMPDH1,IMPDH1,IMPDH1,C7orf68,IMPDH1	3236,3236,-640,-640,-640,3236,49033,3236
chr1:154246639-154247664	chr1	+	154247033	154247545	True	NM_001018837,NM_138740,NM_006118	chr1,chr1,chr1	+,-,+	HAX1,C1orf43,HAX1	-2051,-53760,-2051
chr11:18610519-18610720	chr11	+	18610524	18610666	True	NM_153347,NM_001040697,NM_018314	chr11,chr11,chr11	+,-,-	TMEM86A,UEVLD,UEVLD	109684,-243,-243
chr3:128714737-128715754	chr3	+	128714816	128715560	True	NM_020741,NM_024768	chr3,chr3	-,+	KIAA1257,CCDC48	-1830,4911
chr1:35542406-35544308	chr1	+	35542644	35544063	True	NM_024772,NM_007167	chr1,chr1	+,-	ZMYM1,ZMYM6	908,-45075
chr15:42699820-42701023	chr15	+	42699890	42700992	True	NM_022473,NM_173090,NM_173088,NM_173089	chr15,chr15,chr15,chr15	-,+,+,+	ZFP106,CAPN3,CAPN3,CAPN3	48788,-2964,-5353,-2964
chrY:27872839-27874337	chrY	+	27872903	27874356	True	NR_002179,NR_002176,NR_001524	chrY,chrY,chrY	-,+,+	TTTY17C,TTTY3B,TTTY3	-541983,280,280
chrY:27872839-27874337	chrY	-	26088049	26088379	False	NR_001526,NR_002176,NR_001524	chrY,chrY,chrY	+,-,-	TTTY17A,TTTY3B,TTTY3	543099,-280,-280
chr5:34002850-34003287	chr5	+	34002860	34003302	True	NM_001167598,NM_001167595,NM_001167597,NM_001167596,NM_014324,NM_016568,NM_203382	chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,-,+,-	AMACR,AMACR,AMACR,AMACR,AMACR,RXFP3,AMACR	4968,4968,4968,4968,4968,-66420,4968
chr7:90894991-90895245	chr7	+	90895071	90895247	True	NM_006980,NM_003505	chr7,chr7	-,+	MTERF,FZD1	614819,-1339
chrX:55117664-55119645	chrX	+	55117752	55119686	True	NM_001037968,NM_207339	chrX,chrX	-,+	ALAS2,PAGE2	-60255,-2306
chrX:55117664-55119645	chrX	+	55103819	55105753	False	NM_001015038,NM_001037968,NM_207339	chrX,chrX,chrX	+,-,+	PAGE2B,ALAS2,PAGE2	-2366,-46322,9743
chr7:35062798-35063538	chr7	+	35062869	35063414	True	NM_015283,NM_207173	chr7,chr7	-,+	DPY19L1,NPSR1	14301,-365023
chrX:153167691-153168087	chrX	+	153167743	153168083	True	NM_001164741,NM_001146151,NM_000054,NR_027419	chrX,chrX,chrX,chrX	-,+,+,+	ARHGAP4,AVPR2,AVPR2,AVPR2	23681,2445,2445,13
chr12:54698401-54698957	chr12	+	54698496	54698813	True	NM_016057,NM_001136023,NM_006163	chr12,chr12,chr12	+,-,-	COPZ1,NFE2,NFE2	20097,-3705,-8952
chr11:47205208-47205933	chr11	+	47205704	47205904	True	NM_032389,NM_000107,NM_001184974,NM_001184975,NM_016223	chr11,chr11,chr11,chr11,chr11	-,+,-,-,-	ARFGAP2,DDB2,PACSIN3,PACSIN3,PACSIN3	-7285,30588,2156,1578,2156
chr19:43519838-43520062	chr19	+	43519852	43520110	True	NR_036584,NM_001113410	chr19,chr19	+,-	LOC100289650,PSG11	-193888,10571
chr16:67185609-67186506	chr16	+	67185738	67186000	True	NM_003789,NM_033309,NM_018378	chr16,chr16,chr16	-,-,+	TRADD,B3GNT9,FBXL8	7862,-836,7890
chr6:122932473-122932992	chr6	+	122932479	122933008	True	NM_020755,NM_181795,NM_032471	chr6,chr6,chr6	-,+,+	SERINC1,PKIB,PKIB	-139527,-1153,-1153
chr1:219582645-219583954	chr1	+	219582875	219583481	True	NM_138794,NM_018713	chr1,chr1	+,-	LYPLAL1,SLC30A10	-235742,518573
chr3:3840324-3840595	chr3	+	3840333	3840581	True	NM_016302,NM_020873	chr3,chr3	-,+	CRBN,LRRN1	-618932,539
chr5:49970131-49971229	chr5	+	49970205	49970718	True	NM_024615,NM_198449,NM_001178055,NM_001178056	chr5,chr5,chr5,chr5	+,-,+,+	PARP8,EMB,PARP8,PARP8	-7484,-232971,-8523,-7484
chr13:111603886-111605264	chr13	+	111603918	111605111	True	NM_017664,NM_001113511	chr13,chr13	-,+	ANKRD10,ARHGEF7	-36502,162512
chr17:46035695-46036363	chr17	+	46035894	46036398	True	NM_176096,NM_024320	chr17,chr17	+,-	CDK5RAP3,PRR15L	12030,-784
chr4:87267415-87267753	chr4	+	87267492	87267788	True	NM_006264,NM_138980	chr4,chr4	+,-	PTPN13,MAPK10	247679,13637
chr8:47508640-47509675	chr8	+	47508735	47509357	True	NR_027013,NM_005195	chr8,chr8	+,-	NCRNA00293,CEBPD	243150,1141419
chr20:38888392-38889161	chr20	+	38888601	38889199	True	NM_003286,NM_005461	chr20,chr20	+,-	TOP1,MAFB	768262,428727
chr19:51961077-51961437	chr19	+	51961173	51961435	True	NM_001080405,NM_014442	chr19,chr19	+,-	CEACAM18,SIGLEC8	18402,323
chr8:144896407-144897282	chr8	+	144896499	144897101	True	NR_033849,NM_182706,NR_030633,NM_015356	chr8,chr8,chr8,chr8	+,-,-,-	LOC100128338,SCRIB,MIR937,SCRIB	-80240,498,-1287,498
chrX:133404780-133406296	chrX	+	133404888	133406176	True	NM_001101357,NR_029523	chrX,chrX	+,-	CCDC160,MIR106A	-33874,-100580
chr16:57317114-57317522	chr16	+	57317119	57317439	True	NM_015993,NM_012106	chr16,chr16	-,+	PLLP,ARL2BP	1195,-38135
chr19:48867805-48868885	chr19	+	48867837	48867999	True	NM_018273,NM_012451	chr19,chr19	-,+	TMEM143,SYNGR4	-651,-237
chr16:48658223-48658608	chr16	+	48658326	48658594	True	NM_153029,NM_031490	chr16,chr16	-,+	N4BP1,LONP2	-14206,-380173
chr12:57469741-57470835	chr12	+	57469940	57470826	True	NM_001130963,NM_005967,NM_015257	chr12,chr12,chr12	-,+,-	TMEM194A,NAB2,TMEM194A	1809,11850,1809
chr3:101443802-101444190	chr3	+	101443841	101444135	True	NM_000986,NM_024548	chr3,chr3	-,+	RPL24,CEP97	-38278,-398
chr3:113559109-113560223	chr3	+	113559108	113560036	True	NM_017577,NM_025146	chr3,chr3	+,-	GRAMD1C,NAA50	-1478,-93988
chr20:60961266-60961577	chr20	+	60961275	60961569	True	NM_001024,NM_005560	chr20,chr20	+,-	RPS21,LAMA5	551,-18907
chr1:108996598-108998329	chr1	+	108996630	108998178	True	NM_001102592,NM_001143987,NM_001143988	chr1,chr1,chr1	-,+,+	HENMT1,NBPF6,NBPF6	205616,-3777,-3777
chr1:108996598-108998329	chr1	-	108781410	108782958	False	NM_001143987,NM_001143989	chr1,chr1	+,-	NBPF6,NBPF4	209945,3795
chr1:108996598-108998329	chr1	+	108922169	108923717	False	NM_001143987,NM_001143989	chr1,chr1	+,-	NBPF6,NBPF4	69186,-135466
chr15:93456936-93458595	chr15	+	93457131	93458331	True	NM_001166286,NR_036136	chr15,chr15	-,+	RGMA,MIR3175	158108,-9554
chr7:98969830-98970236	chr7	+	98970146	98970256	True	NM_005720,NM_014891	chr7,chr7	+,-	ARPC1B,PDAP1	2041,36099
chr9:65600804-65602797	chr9	+	65600849	65602818	True	NR_024496,NM_015667	chr9,chr9	+,-	LOC442421,FAM75A7	891450,-91239
chr9:65600804-65602797	chr9	+	43859760	43860896	False	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	-229030,-174926
chr9:65600804-65602797	chr9	-	39133242	39134876	False	NM_033655,NM_001085452	chr9,chr9	-,+	CNTNAP3,FAM75A1	153475,220822
chr2:114511789-114513069	chr2	+	114512004	114513102	True	NM_013412,NM_025181	chr2,chr2	+,-	RABL2A,SLC35F5	-127246,1348
chr1:12184801-12185033	chr1	+	12184945	12185051	True	NM_152942,NM_138346	chr1,chr1	+,-	TNFRSF8,KIAA2013	906,-198460
chr12:5541650-5542029	chr12	+	5541666	5542008	True	NM_020373,NM_001102654	chr12,chr12	-,+	ANO2,NTF3	513440,-437
chr2:34108160-34109532	chr2	+	34108665	34109392	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-369785,-155381
chr4:128798044-128798407	chr4	+	128798340	128798408	True	NM_001190799,NM_001190801,NM_152778,NM_014264	chr4,chr4,chr4,chr4	+,+,-,+	PLK4,PLK4,MFSD8,PLK4	3607,3990,88781,3607
chr9:130851386-130852650	chr9	+	130851497	130852333	True	NM_197956,NM_001006643,NM_052901,NM_001006642	chr9,chr9,chr9,chr9	-,+,+,+	NAIF1,SLC25A25,SLC25A25,SLC25A25	-21898,8502,8483,1794
chrY:23754167-23755026	chrY	+	23754246	23755064	True	NM_001006120,NR_001537	chrY,chrY	+,-	RBMY1D,TTTY13	-57492,1538
chr12:32258318-32259456	chr12	+	32258395	32259191	True	NM_001714,NM_001003398,NM_001013699	chr12,chr12,chr12	+,+,-	BICD1,BICD1,H3F3C	993,993,-313220
chr1:155100315-155100580	chr1	+	155100351	155100571	True	NM_004428,NM_018973,NM_018845,NM_001122839,NM_001122837,NM_182685	chr1,chr1,chr1,chr1,chr1,chr1	+,-,+,+,+,+	EFNA1,DPM3,SLC50A1,SLC50A1,SLC50A1,EFNA1	-53,12362,7716,7716,7716,-53
chr12:93824183-93824857	chr12	+	93824186	93824357	True	NM_003348,NM_014050	chr12,chr12	-,+	UBE2N,MRPL42	11726,36912
chr19:14169947-14170954	chr19	+	14170144	14170992	True	NR_024282,NM_001145028	chr19,chr19	+,-	LOC113230,PALM3	12828,-173
chr7:150687725-150688009	chr7	+	150687728	150688054	True	NM_172056,NM_001160110,NM_001160109,NM_000603,NM_001160111	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	KCNH2,NOS3,NOS3,NOS3,NOS3	-12326,2837,2837,89,2837
chr20:49547848-49548262	chr20	+	49547951	49548248	True	NM_181442,NM_015339,NM_014484	chr20,chr20,chr20	-,-,+	ADNP,ADNP,MOCS3	-424,-424,27114
chr1:44437359-44438102	chr1	+	44437361	44438051	True	NM_001384,NM_001005417,NM_003780,NM_004047,NM_001039457,NM_006934,NM_001039589	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-,+	DPH2,B4GALT2,B4GALT2,ATP6V0B,ATP6V0B,SLC6A9,DPH2	-1759,8131,6814,2550,2550,44996,-1759
chr4:54457643-54458724	chr4	+	54457810	54458676	True	NM_001126328,NM_030917	chr4,chr4	-,+	LNX1,FIP1L1	-86,-214041
chr22:21023895-21024113	chr22	+	21023919	21024135	True	NM_002650,NR_024592	chr22,chr22	-,+	PI4KA,POM121L4P	64870,19707
chr22:21023895-21024113	chr22	+	22471049	22471107	False	NM_007128,NM_003935	chr22,chr22	+,-	VPREB1,TOP3B	128092,-133902
chr16:11441080-11441796	chr16	+	11441203	11441627	True	NM_152308,NM_002761	chr16,chr16	+,-	C16orf75,PRM1	-1943,-66011
chr7:156111381-156111665	chr7	+	156111487	156111651	True	NR_026865,NR_024119	chr7,chr7	-,+	C7orf13,NCRNA00244	321747,221533
chr5:108744721-108744942	chr5	+	108744727	108744913	True	NM_014819,NM_002372	chr5,chr5	-,+	PJA2,MAN2A1	812,280242
chr10:129704333-129705103	chr10	+	129704428	129704840	True	NM_006504,NM_152311	chr10,chr10	+,-	PTPRE,CLRN3	484,-13217
chr11:12132513-12132962	chr11	+	12132512	12132791	True	NM_013253,NM_014632	chr11,chr11	-,+	DKK3,MICAL2	-101595,-425
chr3:54157787-54158181	chr3	+	54157869	54158219	True	NM_018398,NM_021237	chr3,chr3	+,-	CACNA2D3,SELK	-1227,-231880
chr6:42981661-42981921	chr6	+	42981780	42981950	True	NM_057161,NM_033112,NM_014623	chr6,chr6,chr6	+,+,-	KLHDC3,RRP36,MEA1	26,7434,-162
chrX:54977064-54977318	chrX	+	54977138	54977346	True	NM_002625,NM_177556	chrX,chrX	-,+	PFKFB1,TRO	43215,-29940
chr18:7115957-7116286	chr18	+	7115976	7116326	True	NM_005559,NM_001105581	chr18,chr18	-,+	LAMA1,LRRC30	1537,114810
chr4:90032929-90033516	chr4	+	90033073	90033550	True	NM_014883,NM_145715	chr4,chr4	-,+	FAM13A,TIGD2	-54750,417
chrX:132542616-132543037	chrX	+	132542824	132542931	True	NM_001101357,NM_001448	chrX,chrX	+,-	CCDC160,GPC4	828145,6331
chr17:41366089-41367116	chr17	+	41366278	41366612	True	NM_007300,NM_145041	chr17,chr17	-,+	BRCA1,TMEM106A	-88778,-2435
chr9:112296052-112296463	chr9	+	112296153	112296418	True	NM_002829,NM_001037293	chr9,chr9	-,+	PTPN3,PALM2	-35560,106649
chr5:176235611-176236082	chr5	+	176235611	176236080	True	NM_133369,NM_002115	chr5,chr5	+,-	UNC5A,HK3	1479,90304
chr7:112430503-112431862	chr7	+	112430749	112431751	True	NM_182597,NM_022484	chr7,chr7	+,-	C7orf53,TMEM168	-309734,-271
chr15:80200395-80200658	chr15	+	80200409	80200667	True	NR_028330,NM_001100879	chr15,chr15	+,-	C15orf37,ST20	14445,6987
chr5:54826795-54828639	chr5	+	54826843	54828132	True	NR_001575,NM_001166533,NM_003711,NM_176895	chr5,chr5,chr5,chr5	-,+,-,-	RNF138P1,DDX4,PPAP2A,PPAP2A	2301,205712,2804,2804
chr7:121944181-121944515	chr7	+	121944381	121944503	True	NM_001160264,NM_001024613,NR_036484	chr7,chr7,chr7	-,-,+	FEZF1,FEZF1,LOC154860	112,112,-720
chr12:129308182-129308389	chr12	+	129308203	129308357	True	NM_145648,NM_144669	chr12,chr12	-,+	SLC15A4,GLT1D1	234,29723
chr19:40698597-40699740	chr19	+	40698857	40699721	True	NM_152479,NM_002446	chr19,chr19	-,+	TTC9B,MAP3K10	24635,-1257
chr1:147417357-147417707	chr1	+	147417368	147417753	True	NR_003377,NM_001097616	chr1,chr1	-,+	PDZK1P1,GPR89C	66633,7813
chr1:147417357-147417707	chr1	-	145810018	145810183	False	NM_001097612,NM_001097616	chr1,chr1	-,+	GPR89A,GPR89C	16972,73684
chr4:17616346-17616702	chr4	+	17616395	17616671	True	NM_025205,NM_000320	chr4,chr4	+,-	MED28,QDPR	-173,-102538
chr22:47158737-47159080	chr22	+	47158925	47159089	True	NM_022766,NM_014346	chr22,chr22	-,+	CERK,TBC1D22A	-24773,-458
chr11:67349372-67350580	chr11	+	67349979	67350163	True	NM_000852,NR_033791	chr11,chr11	+,-	GSTP1,DOC2GP	902,33022
chr17:39781901-39782130	chr17	+	39781933	39782175	True	NM_005801,NM_000422	chr17,chr17	+,-	EIF1,KRT17	62951,-1051
chr5:140552598-140553227	chr5	+	140552613	140553239	True	NM_019120,NM_020957,NM_031947,NM_018940	chr5,chr5,chr5,chr5	+,+,-,+	PCDHB8,PCDHB16,SLC25A2,PCDHB7	4190,7740,130423,-433
chr11:118973760-118974126	chr11	+	118973953	118974106	True	NM_014807,NM_001382,NM_002105	chr11,chr11,chr11	+,-,-	C2CD2L,DPAGT1,H2AFX	3986,-1168,-7776
chr4:57051416-57052199	chr4	+	57051427	57052115	True	NM_181806,NM_020722	chr4,chr4	-,+	AASDH,KIAA1211	201581,-15118
chrX:42634820-42636752	chrX	+	42635008	42636768	True	NM_000240,NR_002191	chrX,chrX	+,-	MAOA,PPP1R2P9	878640,768
chr1:201369005-201369670	chr1	+	201369026	201369684	True	NM_005558,NM_001005337	chr1,chr1	-,+	LAD1,PKP1	-357,-116497
chr19:11590962-11591299	chr19	+	11591009	11591247	True	NM_032281,NM_001420,NM_002743	chr19,chr19,chr19	-,-,+	ELAVL3,ELAVL3,PRKCSH	606,606,-44791
chr20:25779817-25780515	chr20	+	25779816	25780440	True	NR_004846,NR_026714,NR_027061	chr20,chr20,chr20	+,-,-	LOC100134868,FAM182B,FAM182B	209994,1537,-2938
chr20:25779817-25780515	chr20	-	26036736	26037360	False	NR_003678,NR_026713	chr20,chr20	-,+	C20orf191,FAM182A	57367,-1537
chr15:48418868-48419157	chr15	+	48418950	48419085	True	NM_205850,NM_016132	chr15,chr15	+,-	SLC24A5,MYEF2	-5832,51530
chr4:3373758-3374081	chr4	+	3373794	3373936	True	NM_002337,NM_198227	chr4,chr4	-,+	LRPAP1,RGS12	160338,-2121
chr7:45027083-45027981	chr7	+	45027176	45027822	True	NR_002952,NR_003697,NM_033054,NR_030770	chr7,chr7,chr7,chr7	-,-,-,+	SNORA9,C7orf40,MYO1G,CCM2	-2067,-917,-8472,11522
chr9:134311674-134312031	chr9	+	134311772	134312078	True	NM_001135954,NM_013318	chr9,chr9	-,+	UCK1,PRRC2B	94634,-6355
chr19:9435453-9436322	chr19	+	9435459	9436197	True	NM_001172650,NM_001202425,NM_032497,NM_198535,NM_001202409,NM_001202408,NM_001202407,NM_001202406,NM_001202410,NM_001202411,NM_001202412	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,-,+,+,+,+,+,+,+	ZNF559-ZNF177,ZNF559-ZNF177,ZNF559,ZNF699,ZNF559,ZNF559,ZNF559,ZNF559,ZNF559,ZNF559,ZNF559	-608,-139,-1062,-19664,-1062,-1062,-1062,-1062,-1062,-1062,-608
chr19:12808798-12809586	chr19	+	12808952	12809308	True	NM_032301,NR_002751,NM_032332	chr19,chr19,chr19	-,-,+	FBXW9,SNORD41,WDR83	-1497,8076,-28486
chr12:88407718-88408237	chr12	+	88407718	88408032	True	NM_152589,NM_001009894	chr12,chr12	-,+	C12orf50,C12orf29	15207,21235
chr2:85844106-85844903	chr2	+	85844129	85844936	True	NM_006590,NM_001013649	chr2,chr2	+,-	USP39,C2orf68	-898,-4950
chr15:80724051-80724271	chr15	+	80724095	80724283	True	NM_014862,NR_033833	chr15,chr15	+,-	ARNT2,LOC283688	-27454,-89948
chr12:88525131-88525735	chr12	+	88525328	88525791	True	NM_025114,NM_181783	chr12,chr12	-,+	CEP290,TMTC3	10259,10281
chr22:39762804-39763910	chr22	+	39762807	39763927	True	NM_001033853,NM_145738	chr22,chr22	-,+	RPL3,SYNGR1	-47137,-2683
chr16:68875095-68875679	chr16	+	68875257	68875594	True	NM_001040146,NM_024562	chr16,chr16	-,+	CHTF8,TMCO7	290525,1914
chr7:79768410-79769390	chr7	+	79768410	79769219	True	NM_001102386,NM_002069	chr7,chr7	-,+	GNAT3,GNAI1	372081,-4328
chr2:112641903-112642932	chr2	+	112641937	112642228	True	NM_022662,NM_006343	chr2,chr2	-,+	ANAPC1,MERTK	-196,13962
chr8:74780711-74781512	chr8	+	74780775	74781505	True	NM_001001481,NM_018299,NM_001040613	chr8,chr8,chr8	-,-,+	UBE2W,UBE2W,TMEM70	9664,9664,106871
chr10:94590802-94591054	chr10	+	94590806	94591078	True	NM_004969,NM_001013848	chr10,chr10	-,+	IDE,EXOC6	-256954,3391
chr12:80316908-80317624	chr12	+	80317093	80317408	True	NM_001143886,NM_173591	chr12,chr12	-,+	PPP1R12A,OTOGL	-9402,285824
chr2:163695245-163695491	chr2	+	163695366	163695472	True	NM_033272,NM_012198,NM_173162	chr2,chr2,chr2	-,+,-	KCNH7,GCA,KCNH7	-109,-494834,-109
chr1:17575418-17575967	chr1	+	17575429	17575922	True	NM_016233,NM_007365	chr1,chr1	+,-	PADI3,PADI2	-69,-129481
chr10:72159547-72160340	chr10	+	72159742	72160272	True	NM_018239,NM_004096	chr10,chr10	-,+	LRRC20,EIF4EBP2	-17360,3588
chr5:65909999-65911153	chr5	+	65910218	65910856	True	NM_001164664,NM_005582	chr5,chr5	+,-	MAST4,CD180	-18102,581811
chr8:37732031-37732237	chr8	+	37732067	37732219	True	NM_018310,NM_032777	chr8,chr8	-,+	BRF2,GPR124	-24636,-77717
chr3:43660384-43662124	chr3	+	43660584	43661624	True	NM_016006,NM_001204832,NM_001204834,NM_001204831,NM_018075,NM_001204833	chr3,chr3,chr3,chr3,chr3,chr3	+,-,-,-,-,-	ABHD5,ANO10,ANO10,ANO10,ANO10,ANO10	70750,1999,1999,1999,1999,1999
chr5:115150473-115151006	chr5	+	115150481	115150980	True	NM_001284,NM_001801	chr5,chr5	+,-	AP3S1,CDO1	26638,1476
chr16:29271376-29271635	chr16	+	29271483	29271683	True	NR_002939,NM_001031827	chr16,chr16	+,-	RUNDC2C,BOLA2	30857,194652
chr16:29271376-29271635	chr16	+	88266675	88266837	False	NM_001127464,NM_001739	chr16,chr16	+,-	ZNF469,CA5A	227041,-296563
chr13:29247720-29249508	chr13	+	29247727	29248712	True	NM_001135919,NM_015932	chr13,chr13	-,+	SLC46A3,POMP	44489,-14638
chr11:128762347-128763506	chr11	+	128762419	128763452	True	NM_000890,NM_145013	chr11,chr11	+,-	KCNJ5,C11orf45	-1163,12190
chr3:170620687-170621930	chr3	+	170620749	170621975	True	NM_020390,NM_001185056	chr3,chr3	-,+	EIF5A2,CLDN11	4511,-481772
chrX:47479020-47479273	chrX	+	47479044	47479260	True	NM_006950,NM_133499,NM_003254	chrX,chrX,chrX	-,-,+	SYN1,SYN1,TIMP1	46,46,-37405
chr7:27777689-27778338	chr7	+	27778005	27778142	True	NM_006024,NM_152740,NM_001079864	chr7,chr7,chr7	+,-,+	TAX1BP1,HIBADH,TAX1BP1	1595,-75385,1595
chr11:34652476-34652872	chr11	+	34652507	34652920	True	NM_001422,NM_012153	chr11,chr11	-,+	ELF5,EHF	-117177,-9979
chr2:7029041-7031037	chr2	+	7029051	7031055	True	NM_207315,NM_080657	chr2,chr2	-,+	CMPK2,RSAD2	-23115,-11306
chr5:35630720-35632267	chr5	+	35631042	35631972	True	NM_024867,NM_001042625	chr5,chr5	+,-	SPEF2,CAPSL	-13120,306827
chr2:216947051-216947592	chr2	+	216947070	216947550	True	NM_018441,NM_001142312,NM_138390,NM_001142310,NM_001142311	chr2,chr2,chr2,chr2,chr2	-,+,+,+,+	PECR,TMEM169,TMEM169,TMEM169,TMEM169	-531,-539,-539,-539,-539
chr13:49018687-49019594	chr13	+	49018820	49019614	True	NM_005767,NM_000321	chr13,chr13	-,+	LPAR6,RB1	20,-141001
chr10:47658395-47659645	chr10	+	47658568	47659588	True	NR_003601,NR_024495	chr10,chr10	+,-	ANTXRL,LOC642826	-385,-415074
chr4:78741702-78741922	chr4	+	78741746	78741966	True	NM_020236,NM_144571	chr4,chr4	+,-	MRPL1,CNOT6L	41838,-1202
chr5:177299915-177301853	chr5	+	177300334	177301125	True	NR_003615,NM_173663	chr5,chr5	+,-	LOC728554,FAM153A	1136,-92829
chr5:177299915-177301853	chr5	-	175396682	175397480	False	NM_032361,NM_001008220	chr5,chr5	-,+	THOC3,CPLX2	-1137,-98232
chr3:38061287-38061690	chr3	+	38061387	38061641	True	NM_006225,NR_024071,NM_001130964,NM_007335	chr3,chr3,chr3,chr3	-,-,-,+	PLCD1,PLCD1,PLCD1,DLEC1	9563,4687,4687,19054
chr3:89152163-89153847	chr3	+	89152265	89153842	True	NM_182644,NM_001195308,NM_005233	chr3,chr3,chr3	+,-,+	EPHA3,CGGBP1,EPHA3	2831,-953249,2831
chr14:66973698-66974466	chr14	+	66973897	66974433	True	NM_015994,NM_001024218,NM_020806	chr14,chr14,chr14	-,+,+	ATP6V1D,GPHN,GPHN	852337,5,5
chr7:37489348-37490205	chr7	+	37489412	37490130	True	NM_181791,NM_014800	chr7,chr7	+,-	GPR141,ELMO1	289865,-901
chr7:27140893-27141316	chr7	+	27140902	27141373	True	NM_005522,NM_153620,NM_006735,NR_002795	chr7,chr7,chr7,chr7	-,-,-,+	HOXA1,HOXA1,HOXA2,HOXA11-AS1	-5277,-5277,1082,83653
chr17:18585238-18585458	chr17	+	18585353	18585413	True	NM_001145045,NM_001037330,NR_026718	chr17,chr17,chr17	-,+,-	ZNF286B,TRIM16L,FOXO3B	209,39988,-8859
chr17:18585238-18585458	chr17	-	15603194	15603254	False	NM_006470,NM_001130842,NM_020652	chr17,chr17,chr17	-,+,+	TRIM16,ZNF286A,ZNF286A	-17001,-354,-354
chr4:147561595-147561949	chr4	+	147561618	147561982	True	NM_032128,NM_004575	chr4,chr4	-,+	SLC10A7,POU4F2	-118495,-1624
chr21:46067182-46068707	chr21	+	46067546	46068393	True	NM_198697,NM_198698,NM_198692	chr21,chr21,chr21	+,-,+	KRTAP12-3,KRTAP12-4,KRTAP10-11	9455,6240,-1266
chr10:112641150-112642391	chr10	+	112641163	112642410	True	NM_014456,NR_026932,NM_145341,NM_001199492	chr10,chr10,chr10,chr10	+,-,+,+	PDCD4,LOC282997,PDCD4,PDCD4	-9661,-10501,-9661,-9661
chr2:198843899-198844200	chr2	+	198843910	198844183	True	NM_006226,NM_197970	chr2,chr2	+,-	PLCL1,BOLL	-174540,-192972
chr18:19334948-19335569	chr18	+	19334958	19335618	True	NM_138340,NM_020774	chr18,chr18	-,+	ABHD3,MIB1	-50192,-13464
chr12:70761405-70761686	chr12	+	70761416	70761639	True	NM_002837,NM_014505	chr12,chr12	-,+	PTPRB,KCNMB4	242048,-1405
chr9:130543013-130543454	chr9	+	130543017	130543229	True	NM_005489,NR_036055,NM_170600,NM_001261	chr9,chr9,chr9,chr9	-,+,-,+	SH2D3C,MIR2861,SH2D3C,CDK9	-9396,4967,-1969,5075
chr5:749056-749622	chr5	+	749222	749626	True	NM_018140,NM_007030	chr5,chr5	+,-	CEP72,TPPP	-136868,-55712
chr1:212208023-212208478	chr1	+	212208035	212208501	True	NM_001199809,NM_001199811,NM_001199812,NM_015434,NR_037667,NM_016448	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,+	INTS7,INTS7,INTS7,INTS7,INTS7,DTL	551,551,551,551,551,417
chr7:66312958-66314570	chr7	+	66313038	66314400	True	NR_003934,NM_017994	chr7,chr7	-,+	LOC729156,C7orf42	-3225,71802
chr15:42129944-42130311	chr15	+	42130081	42130359	True	NR_036195,NM_001198588,NM_001114632,NM_001114633,NM_005090	chr15,chr15,chr15,chr15,chr15	-,+,+,+,+	MIR4310,JMJD7-PLA2G4B,JMJD7,PLA2G4B,JMJD7-PLA2G4B	28440,-9849,-9849,651,-9849
chr12:69758693-69760612	chr12	+	69759449	69760634	True	NM_006530,NR_031692	chr12,chr12	+,-	YEATS4,MIR1279	-5980,-92451
chrX:30906106-30906441	chrX	+	30906105	30906467	True	NM_203391,NM_152787	chrX,chrX	+,-	GK,TAB3	-234680,1094
chr3:63264535-63264824	chr3	+	63264558	63264872	True	NM_001130003,NM_183394	chr3,chr3	+,-	SYNPR,CADPS	-695,-403494
chr1:203470946-203472095	chr1	+	203470950	203472098	True	NM_002023,NM_014359	chr1,chr1	-,+	FMOD,OPTC	-150661,-7730
chr13:96204999-96205445	chr13	+	96204998	96205370	True	NM_006984,NM_014934	chr13,chr13	+,-	CLDN10,DZIP1	-102,91637
chr22:19142377-19143754	chr22	+	19142558	19143561	True	NM_005315,NM_053006	chr22,chr22	-,+	GSC2,TSSK2	-4762,-24288
chr11:86667904-86669799	chr11	+	86668031	86669813	True	NM_012193,NM_001168724	chr11,chr11	-,+	FZD4,TMEM135	-1598,79072
chr1:183266300-183266608	chr1	+	183266305	183266459	True	NM_170706,NM_005562	chr1,chr1	-,+	NMNAT2,LAMC2	7606,-111182
chr3:50341281-50341503	chr3	+	50341286	50341392	True	NM_001200016,NM_001200029,NM_153281,NM_003549,NM_153282,NM_153283,NM_033159,NM_012191,NM_001200018,NM_153285,NM_007312,NM_001200030,NM_153215,NM_001200031,NM_001200032	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,-,-,-,-,-,-,-,-,+,-,-	NAT6,HYAL3,HYAL1,HYAL3,HYAL1,HYAL1,HYAL1,NAT6,NAT6,HYAL1,HYAL1,HYAL3,C3orf45,HYAL3,HYAL3	-4434,-4993,8474,-4387,-282,-282,-282,-4434,-4966,-282,-282,-4387,-24819,-4387,-4387
chr5:474325-474984	chr5	+	474404	475010	True	NM_007277,NR_024158	chr5,chr5	+,-	EXOC3,LOC25845	-31121,-1324
chr9:116860099-116860379	chr9	+	116860098	116860294	True	NM_138424,NM_032888	chr9,chr9	-,+	KIF12,COL27A1	1093,57936
chr6:32525771-32526340	chr6	+	32525842	32525944	True	NR_001298,NM_002122	chr6,chr6	-,+	HLA-DRB6,HLA-DQA1	1885,79238
chr2:176990113-176990497	chr2	+	176990299	176990363	True	NM_002148,NM_019558,NM_014213,NM_001080458,NM_001199747,NM_001199746	chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,-,+,+	HOXD10,HOXD8,HOXD9,EVX2,HOXD8,HOXD8	-8858,4104,-2937,-41609,4058,4104
chr1:156784994-156785680	chr1	+	156785108	156785650	True	NM_003975,NM_001007792,NM_001161441,NM_001161443,NM_001161442,NM_001161444	chr1,chr1,chr1,chr1,chr1,chr1	-,+,-,-,-,-	SH2D2A,NTRK1,SH2D2A,SH2D2A,SH2D2A,SH2D2A	1040,37,1040,339,1040,1040
chr11:3491311-3492652	chr11	+	3491918	3492381	True	NM_007152,NR_024248	chr11,chr11	-,+	ZNF195,LOC650368	-91470,-89784
chr12:76654644-76655294	chr12	+	76654824	76655346	True	NM_015336,NM_024685	chr12,chr12	+,-	ZDHHC17,BBS10	502507,86932
chr17:40720906-40722764	chr17	+	40721293	40722417	True	NM_016556,NM_170607,NM_198204,NM_198205,NM_025233,NM_001042531,NM_001042530,NM_001042532,NM_013290,NM_001042529	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,+,+,+,+,+,+,-,+	PSMC3IP,MLX,MLX,MLX,COASY,COASY,COASY,COASY,PSMC3IP,COASY	7380,-2266,-2266,-2266,-7252,-7252,-7252,-7252,7380,-7252
chr17:4614655-4614933	chr17	+	4614821	4614975	True	NM_004313,NM_199004,NM_014389	chr17,chr17,chr17	+,+,-	ARRB2,ARRB2,PELP1	-1083,-1083,-7189
chr3:122232457-122233047	chr3	+	122232829	122233061	True	NM_002264,NM_138287,NR_026698	chr3,chr3,chr3	-,+,-	KPNA1,DTX3L,KPNA1	775,50123,775
chr17:2239249-2239701	chr17	+	2239257	2239647	True	NR_003072,NR_003073,NM_014853,NM_018128,NM_001098509	chr17,chr17,chr17,chr17,chr17	-,-,+,-,+	SNORD91A,SNORD91B,SGSM2,TSR1,SGSM2	-5593,-6753,1158,1081,1160
chr19:18699165-18699512	chr19	+	18699285	18699417	True	NM_004750,NM_001100419,NM_001100418	chr19,chr19,chr19	-,+,+	CRLF1,C19orf60,C19orf60	18293,77,77
chr7:141435691-141437405	chr7	+	141436383	141437397	True	NM_003143,NR_015392	chr7,chr7	+,-	SSBP1,FLJ40852	778,690
chr3:50735064-50735626	chr3	+	50735065	50735573	True	NM_145071,NM_004947	chr3,chr3	-,+	CISH,DOCK3	-85803,-22444
chr10:92631886-92632110	chr10	+	92631885	92632157	True	NM_019860,NM_001104546,NM_006413	chr10,chr10,chr10	-,+,+	HTR7,RPP30,RPP30	-14214,-227,-227
chr4:71393495-71394087	chr4	+	71393500	71394099	True	NM_144646,NM_212557	chr4,chr4	-,+	IGJ,AMTN	138304,-9255
chr10:82178404-82178832	chr10	+	82178422	82178702	True	NR_024572,NM_138812	chr10,chr10	+,-	C10orf58,DYDC1	-4882,-61922
chr19:57045314-57047186	chr19	+	57046165	57047195	True	NR_030740,NM_020828	chr19,chr19	-,+	ZNF667,ZFP28	-57395,3121
chr17:43213953-43214802	chr17	+	43213970	43214766	True	NM_024722,NM_001135704,NM_001135707,NM_001135706,NM_001135705,NM_133373,NM_006460	chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,-,+	ACBD4,ACBD4,ACBD4,ACBD4,ACBD4,PLCD3,HEXIM1	-1007,-4054,-1007,-1007,-1007,-4079,9917
chr7:74508692-74508957	chr7	+	74508783	74508919	True	NM_030798,NM_001003795	chr7,chr7	-,+	WBSCR16,GTF2IRD2B	-19084,-487
chr12:106531879-106532139	chr12	+	106531885	106532029	True	NM_014840,NM_152772	chr12,chr12	-,+	NUAK1,TCP11L2	1832,164551
chr19:57873508-57874557	chr19	+	57873959	57874535	True	NM_173631,NR_002166,NM_020633	chr19,chr19,chr19	+,+,-	ZNF547,TRAPPC2P1,VN1R1	355,343,93628
chr15:100204556-100204927	chr15	+	100204607	100204943	True	NM_001130928,NM_152449	chr15,chr15	+,-	MEF2A,LYSMD4	-31486,68733
chr20:34895134-34895364	chr20	+	34895253	34895321	True	NR_027451,NM_015511	chr20,chr20	-,+	LOC647979,C20orf4	-256371,-70857
chr6:12288403-12288665	chr6	+	12288413	12288545	True	NM_001168319,NM_032744,NM_001955	chr6,chr6,chr6	+,-,+	EDN1,C6orf105,EDN1	1983,-509133,1983
chr8:94712185-94712416	chr8	+	94712211	94712409	True	NM_145269,NR_033858	chr8,chr8	+,-	FAM92A1,LOC642924	363,302
chr14:34420432-34420681	chr14	+	34420464	34420705	True	NR_002937,NM_022073	chr14,chr14	+,-	C14orf19,EGLN3	988422,-180
chr1:3780822-3781968	chr1	+	3780919	3781995	True	NM_004402,NM_014704	chr1,chr1	+,-	DFFB,KIAA0562	-7125,-7122
chr11:82997307-82998145	chr11	+	82997428	82997923	True	NM_182603,NM_021825	chr11,chr11	+,-	ANKRD42,CCDC90B	-92188,-51
chr2:139660392-139662309	chr2	+	139660412	139661977	True	NM_007226,NR_033658	chr2,chr2	-,+	NXPH2,LOC647012	-122601,-5576
chr17:7322645-7323683	chr17	+	7322668	7323619	True	NM_152766,NM_199339,NM_175734	chr17,chr17,chr17	-,+,+	C17orf61,SPEM1,C17orf74	-15218,59,5315
chr3:10053006-10053301	chr3	+	10053009	10053087	True	NM_001008737,NM_033084	chr3,chr3	-,+	LOC401052,FANCD2	-230,15025
chr15:49769111-49770410	chr15	+	49769534	49769827	True	NM_152647,NM_002009	chr15,chr15	-,+	C15orf33,FGF7	143348,-54210
chr3:38072969-38073312	chr3	+	38073137	38073355	True	NM_006225,NR_024071,NM_001130964,NM_007335,NM_007337	chr3,chr3,chr3,chr3,chr3	-,-,-,+,+	PLCD1,PLCD1,PLCD1,DLEC1,DLEC1	-1983,-6859,-6859,7340,7340
chr19:54745614-54746460	chr19	+	54745733	54746457	True	NM_001013,NM_024318	chr19,chr19	+,-	RPS9,LILRA6	-41058,317
chr19:54745614-54746460	chr19	+	54726245	54726705	False	NM_001013,NM_001081450,NM_006864	chr19,chr19,chr19	+,-,-	RPS9,LILRB3,LILRB3	-21570,304,304
chr8:70382391-70383601	chr8	+	70382510	70383560	True	NM_015170,NM_001128204,NM_001146009	chr8,chr8,chr8	+,+,-	SULF1,SULF1,SLCO5A1	-3713,-3713,361900
chr19:7747366-7747684	chr19	+	7747376	7747682	True	NM_002002,NM_174894,NM_001042462,NM_001042461,NM_174918	chr19,chr19,chr19,chr19,chr19	-,+,+,+,+	FCER2,TRAPPC5,TRAPPC5,TRAPPC5,C19orf59	19400,-1666,-1720,-1663,-5484
chr3:186649423-186649670	chr3	+	186649461	186649623	True	NM_181573,NM_173217,NM_173216	chr3,chr3,chr3	-,+,+	RFC4,ST6GAL1,ST6GAL1	-124977,-1197,-1197
chr10:135237077-135237505	chr10	+	135237089	135237193	True	NM_138384,NM_001012508	chr10,chr10	+,-	MTG1,SPRN	-29519,978
chr19:3786650-3786850	chr19	+	3786665	3786875	True	NM_139354,NM_139355,NM_172251	chr19,chr19,chr19	-,-,+	MATK,MATK,MRPL54	-250,-250,-24051
chr3:120383414-120385025	chr3	+	120383805	120385047	True	NM_004547,NM_000187	chr3,chr3	+,-	NDUFB4,HGD	-68730,16421
chr7:43798746-43799775	chr7	+	43798850	43799449	True	NM_000712,NM_018224	chr7,chr7	+,-	BLVRA,C7orf44	-631,-29767
chr15:83222440-83222694	chr15	+	83222590	83222680	True	NM_001199057,NR_033579	chr15,chr15	-,+	LOC100505503,LOC440297	-13382,-92609
chr16:29271635-29272865	chr16	+	29271949	29272853	True	NR_002939,NM_001031827	chr16,chr16	+,-	RUNDC2C,BOLA2	29687,193482
chr16:29271635-29272865	chr16	+	88267521	88267926	False	NM_001127464,NM_001739	chr16,chr16	+,-	ZNF469,CA5A	225952,-297409
chr11:67408446-67408923	chr11	+	67408470	67408896	True	NM_007103,NM_080658,NM_005995	chr11,chr11,chr11	+,-,-	NDUFV1,ACY3,TBX10	-34198,9284,-1439
chr1:156216818-156217148	chr1	+	156216859	156217019	True	NM_024897,NM_199173,NM_198406	chr1,chr1,chr1	-,+,-	PAQR6,BGLAP,PAQR6	874,-4959,823
chr10:129844709-129845105	chr10	+	129844723	129845117	True	NM_130435,NM_001145966	chr10,chr10	+,-	PTPRE,MKI67	695,79401
chr22:32666381-32667556	chr22	+	32666504	32667524	True	NM_014227,NM_006604	chr22,chr22	-,+	SLC5A4,RFPL3	-15186,83347
chr7:72477146-72479035	chr7	+	72477249	72477525	True	NM_001013739,NR_003614	chr7,chr7	-,+	STAG3L3,PMS2L2	-794,-620
chr7:72477146-72479035	chr7	-	74987369	74987645	False	NR_003614,NM_001002840,NM_018991	chr7,chr7,chr7	-,+,+	PMS2L2,STAG3L1,STAG3L1	620,801,801
chr1:41445014-41445238	chr1	+	41445021	41445287	True	NM_001905,NM_001168247	chr1,chr1	+,-	CTPS,SLFNL1	-65,42160
chr8:37556324-37556861	chr8	+	37556347	37556665	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	-3104,48951
chr1:120259777-120260559	chr1	+	120259929	120260533	True	NM_006623,NM_001166107	chr1,chr1	+,-	PHGDH,HMGCS2	-5569,51078
chr5:94612510-94612923	chr5	+	94612683	94612949	True	NM_152548,NM_024717	chr5,chr5	+,-	FAM81B,MCTP1	114098,7380
chr7:99616303-99617706	chr7	+	99616332	99617692	True	NM_001185,NM_003439	chr7,chr7	-,+	AZGP1,ZKSCAN1	-42597,-3171
chrX:47929713-47930634	chrX	+	47930151	47930623	True	NM_001190255,NM_001037735,NR_028366,NR_033730	chrX,chrX,chrX,chrX	-,-,+,-	ZNF630,ZNF630,SSX6,ZNF630	428,-65,36743,452
chr15:65577634-65578695	chr15	+	65577894	65578522	True	NM_001101362,NM_017851	chr15,chr15	+,-	KBTBD13,PARP16	-208791,546
chr10:15133047-15133459	chr10	+	15133235	15133457	True	NM_183005,NM_001097590,NM_006414,NM_001039844,NM_153244	chr10,chr10,chr10,chr10,chr10	+,+,+,-,-	RPP38,RPP38,RPP38,ACBD7,C10orf111	5724,5724,5724,-2460,5911
chr3:118922110-118923643	chr3	+	118922655	118923331	True	NM_006952,NM_003778	chr3,chr3	+,-	UPK1B,B4GALT4	-30290,36471
chr1:72749857-72750194	chr1	+	72749864	72750177	True	NM_153742,NM_173808	chr1,chr1	+,-	CTH,NEGR1	-1873014,-1587
chr14:85996916-85997557	chr14	+	85997075	85997579	True	NM_013231,NM_000153	chr14,chr14	+,-	FLRT2,GALC	-638,2462086
chr12:101674943-101675378	chr12	+	101674951	101675355	True	NM_014503,NM_145913	chr12,chr12	+,-	UTP20,SLC5A8	-1110,-70935
chr1:160235721-160237008	chr1	+	160236191	160237057	True	NR_028105,NR_028104,NR_028106,NR_028103,NR_002190,NM_015726	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,+,-	DCAF8,DCAF8,DCAF8,DCAF8,SUMO1P3,DCAF8	-3873,-3873,-3914,-3873,49997,-3841
chr18:75680761-75682153	chr18	+	75680795	75682105	True	NM_001480,NM_001025100	chr18,chr18	+,-	GALR1,MBP	-718838,-836021
chr1:1293112-1293442	chr1	+	1293191	1293449	True	NM_152228,NM_004421,NM_032348	chr1,chr1,chr1	+,-,-	TAS1R3,DVL1,MXRA8	-26516,-8699,516
chr17:80798479-80798977	chr17	+	80798479	80798834	True	NM_024702,NM_005993	chr17,chr17	-,+	ZNF750,TBCD	-548,-88590
chr14:102027763-102028060	chr14	+	102027767	102028049	True	NR_002770,NR_031649,NM_001362	chr14,chr14,chr14	-,-,+	DIO3OS,MIR1247,DIO3	-5754,-1008,-130
chr1:21975584-21976261	chr1	+	21975655	21976299	True	NM_001177520,NM_001145658	chr1,chr1	+,-	ALPL,RAP1GAP	-139848,2099
chr12:54653291-54654038	chr12	+	54653412	54653813	True	NM_002136,NM_001127322,NM_001127321	chr12,chr12,chr12	+,-,-	HNRNPA1,CBX5,CBX5	20674,-83,-42
chr7:135241412-135242212	chr7	+	135241693	135242260	True	NM_015135,NM_001190848	chr7,chr7	+,-	NUP205,CNOT4	401,-46818
chr20:47891582-47892051	chr20	+	47891691	47891857	True	NR_003605,NR_003604,NR_002433,NR_003606,NR_003695,NR_036658,NR_036659,NM_021035,NR_003030	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,+,+,+,+,+,+,-,+	NCRNA00275,NCRNA00275,SNORD12C,NCRNA00275,SNORD12B,NCRNA00275,NCRNA00275,ZNFX1,SNORD12	2857,2857,3624,2857,4992,2857,3321,2957,5362
chr6:25815068-25816078	chr6	+	25815813	25816091	True	NM_005074,NM_005495	chr6,chr6	-,+	SLC17A1,SLC17A4	16246,-60941
chr8:86952967-86954806	chr8	+	86953007	86954832	True	NR_003594,NM_152565	chr8,chr8	-,+	REXO1L2P,ATP6V0D2	-112836,156306
chr1:161122762-161122968	chr1	+	161122855	161122916	True	NM_032998,NM_012475,NM_001014443,NM_016406	chr1,chr1,chr1,chr1	-,+,+,+	DEDD,USP21,USP21,UFC1	-20377,6337,6337,617
chr6:25817166-25818381	chr6	+	25817394	25818336	True	NM_005074,NM_005495	chr6,chr6	-,+	SLC17A1,SLC17A4	14001,-62532
chr11:78044180-78044539	chr11	+	78044179	78044309	True	NM_020798,NM_012296	chr11,chr11	+,-	USP35,GAB2	-144376,8673
chr22:37880695-37881145	chr22	+	37880924	37881126	True	NM_001166343,NM_152243,NR_029413,NM_002405	chr22,chr22,chr22,chr22	-,+,-,-	MFNG,CDC42EP1,MFNG,MFNG	1349,75344,1402,1402
chr13:73335466-73335834	chr13	+	73335479	73335845	True	NM_006346,NM_001128226	chr13,chr13	+,-	PIBF1,DIS3	20384,20549
chr8:27948716-27949836	chr8	+	27948735	27949610	True	NM_018091,NM_001010906	chr8,chr8	+,-	ELP3,C8orf80	973,-7347
chr10:64578079-64578484	chr10	+	64578085	64578425	True	NM_001136179,NM_001136178,NM_032804,NM_001136177,NM_000399	chr10,chr10,chr10,chr10,chr10	-,-,+,-,-	EGR2,EGR2,ADO,EGR2,EGR2	-1959,552,-13620,-1959,-1959
chr9:136604397-136605026	chr9	+	136604430	136605010	True	NM_007101,NM_000787,NM_001134707	chr9,chr9,chr9	-,+,-	SARDH,DBH,SARDH	117,-103004,-951
chr19:13261582-13262509	chr19	+	13261585	13262392	True	NM_004907,NM_003765	chr19,chr19	+,-	IER2,STX10	-354,-598
chr12:101195842-101196999	chr12	+	101195860	101196942	True	NM_145913,NM_178826	chr12,chr12	-,+	SLC5A8,ANO4	407124,-7538
chr1:53483685-53485552	chr1	+	53484090	53485489	True	NM_018281,NM_001007100,NM_001007099,NM_001007250	chr1,chr1,chr1,chr1	-,+,+,+	ECHDC2,SCP2,SCP2,SCP2	-96644,-3534,-3534,-3534
chr2:234819964-234821612	chr2	+	234819993	234821302	True	NM_024080,NR_024322	chr2,chr2	+,-	TRPM8,MSL3P1	4740,-42938
chr16:4838904-4839158	chr16	+	4838904	4838980	True	NR_029454,NR_029455,NR_029453,NM_001154458,NM_144605	chr16,chr16,chr16,chr16,chr16	+,+,+,-,-	LOC440335,LOC440335,LOC440335,SEPT12,SEPT12	-499,6398,-558,-505,-505
chr6:152638402-152639202	chr6	+	152638411	152639243	True	NM_025107,NM_015293	chr6,chr6	+,-	MYCT1,SYNE1	379786,286
chr1:2518962-2519435	chr1	+	2519079	2519434	True	NR_036637,NM_001195741,NM_001195740,NR_037844,NR_036638,NM_001195738,NM_152371,NM_001195736,NM_001195737	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,-,+,+,+,+,+	C1orf93,C1orf93,C1orf93,LOC100133445,C1orf93,C1orf93,C1orf93,C1orf93,C1orf93	-1231,-941,-941,-30629,-1231,-941,-941,-941,-941
chr11:118133771-118134799	chr11	+	118133773	118134653	True	NM_144765,NM_000733,NM_005797	chr11,chr11,chr11	-,+,-	MPZL2,CD3E,MPZL2	648,40641,648
chr19:4791273-4791473	chr19	+	4791388	4791510	True	NM_182919,NM_018708	chr19,chr19	-,+	TICAM1,FEM1A	40277,217
chr1:145109257-145110875	chr1	+	145109357	145110823	True	NM_004892,NM_022359	chr1,chr1	+,-	SEC22B,PDE4DIP	-13007,-33171
chr1:24104912-24106521	chr1	+	24105279	24106396	True	NM_001127621,NM_020362	chr1,chr1	-,+	GALE,PITHD1	19715,-454
chr5:99403112-99404060	chr5	+	99403372	99403760	True	NM_198507,NR_027503	chr5,chr5	+,-	FAM174A,LOC100133050	467363,320248
chr19:11350564-11351014	chr19	+	11350713	11351051	True	NM_020812,NM_018687	chr19,chr19	-,+	DOCK6,LOC55908	22156,-472
chr22:24198069-24199006	chr22	+	24198804	24199044	True	NM_198440,NM_001024939,NM_001024938,NM_030807	chr22,chr22,chr22,chr22	-,+,+,+	DERL3,SLC2A11,SLC2A11,SLC2A11	-17605,996,14,14
chr18:57014045-57014317	chr18	+	57014086	57014152	True	NM_005570,NM_002091	chr18,chr18	-,+	LMAN1,GRP	12408,-126737
chr1:35258746-35259187	chr1	+	35258826	35259206	True	NM_001164824,NM_002060	chr1,chr1	-,+	C1orf212,GJA4	65490,-278
chr12:122016088-122016372	chr12	+	122016312	122016378	True	NM_032590,NM_032790,NM_001005366	chr12,chr12,chr12	-,+,-	KDM2B,ORAI1,KDM2B	2592,48076,2036
chr19:779869-780390	chr19	+	780048	780156	True	NM_024888,NM_002819	chr19,chr19	-,+	LPPR3,PTBP1	41846,17235
chr3:49833152-49834820	chr3	+	49833160	49834500	True	NM_153273,NM_001006115,NM_001007540,NM_203370	chr3,chr3,chr3,chr3	-,-,-,+	IP6K1,IP6K1,CDHR4,C3orf54	-9187,-9187,2804,6186
chr7:6776466-6777234	chr7	+	6776630	6777282	True	NR_002217,NM_016265	chr7,chr7	+,-	PMS2CL,ZNF12	-1745,-30064
chr7:6776466-6777234	chr7	-	6027097	6027327	False	NM_006303,NM_173565	chr7,chr7	+,-	AIMP2,RSPH10B	21554,-16783
chr2:169920532-169921021	chr2	+	169920573	169921063	True	NM_199204,NM_003742,NM_001142270,NM_005771	chr2,chr2,chr2,chr2	+,-,+,+	DHRS9,ABCB11,DHRS9,DHRS9	2481,-32740,8021,235
chrX:153097800-153098069	chrX	+	153097807	153097999	True	NM_032512,NM_006280	chrX,chrX	-,+	PDZD4,SSR4	-1804,-37839
chr1:151801575-151801887	chr1	+	151801641	151801821	True	NR_024237,NM_001001523,NM_005060	chr1,chr1,chr1	+,-,-	LOC100132111,RORC,RORC	9123,-3088,2577
chr2:182322469-182322758	chr2	+	182322566	182322746	True	NM_001030311,NM_000885	chr2,chr2	-,+	CERKL,ITGA4	199138,-998
chr16:71323454-71324170	chr16	+	71323641	71324074	True	NM_001740,NM_018348,NM_001099642	chr16,chr16,chr16	+,-,-	CALB2,FTSJD1,FTSJD1	68541,-132,-326
chr3:59035788-59036603	chr3	+	59035937	59036370	True	NM_198463,NM_153331	chr3,chr3	-,+	C3orf67,KCTD6	-222,-551896
chr12:112124578-112125962	chr12	+	112124625	112125558	True	NM_006768,NM_001136538,NM_025247	chr12,chr12,chr12	-,+,+	BRAP,ACAD10,ACAD10	-835,-819,-819
chr16:58032747-58033625	chr16	+	58032801	58033631	True	NM_001195302,NM_001204911,NM_020807,NM_024598	chr16,chr16,chr16,chr16	+,+,-,+	C16orf57,C16orf57,ZNF319,C16orf57	1645,1645,181,1645
chr19:822552-822798	chr19	+	822557	822723	True	NM_001700,NM_024888,NR_036154	chr19,chr19,chr19	+,-,+	AZU1,LPPR3,MIR3187	5107,-605,-9024
chr14:53416853-53417176	chr14	+	53416869	53417193	True	NM_001134999,NM_006832,NM_001135000,NM_145251	chr14,chr14,chr14,chr14	-,-,-,+	FERMT2,FERMT2,FERMT2,STYX	672,672,672,-220045
chr17:1088596-1089580	chr17	+	1088602	1089547	True	NM_001164405,NM_021962,NM_001159746	chr17,chr17,chr17	+,-,-	BHLHA9,ABR,ABR	84310,-5471,1119
chr10:52640001-52641042	chr10	+	52640069	52641091	True	NM_001098512,NM_138933,NM_138932,NM_014576,NM_001198820,NM_001198818,NM_001198819	chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,-,-,-,-,-,-	PRKG1,A1CF,A1CF,A1CF,A1CF,A1CF,A1CF	109853,4394,4394,4394,4394,4394,4394
chr2:10864046-10864483	chr2	+	10864199	10864499	True	NM_001039362,NM_144583,NM_024894	chr2,chr2,chr2	+,+,-	ATP6V1C2,ATP6V1C2,NOL10	-2475,-2475,-34087
chr2:86426472-86426807	chr2	+	86426569	86426798	True	NM_006839,NM_016622,NM_001100170,NM_145644,NM_001100169	chr2,chr2,chr2,chr2,chr2	-,+,-,+,-	IMMT,MRPL35,IMMT,MRPL35,IMMT	-3676,-64,-3676,-64,-3676
chr12:113586543-113587935	chr12	+	113586550	113587987	True	NM_004658,NM_001144872	chr12,chr12	-,+	RASAL1,CCDC42B	-12506,-69
chr3:113793336-113794514	chr3	+	113793349	113794173	True	NM_020817,NM_024638	chr3,chr3	-,+	KIAA1407,QTRTD1	-17889,-17797
chr1:51698810-51699283	chr1	+	51698977	51699041	True	NM_001080494,NM_014372	chr1,chr1	-,+	TTC39A,RNF11	88947,2903
chr8:21645149-21645450	chr8	+	21645324	21645484	True	NM_001495,NM_001165038,NM_001165039,NM_015024	chr8,chr8,chr8,chr8	-,-,-,+	GFRA2,GFRA2,GFRA2,XPO7	912,912,912,131695
chr19:14117421-14117701	chr19	+	14117420	14117728	True	NM_002918,NM_080864	chr19,chr19	-,+	RFX1,RLN3	-286,21288
chr3:57581829-57582300	chr3	+	57582154	57582270	True	NM_001660,NM_177966	chr3,chr3	-,+	ARF4,PDE12	995,-40228
chr3:187607823-187608043	chr3	+	187607826	187607938	True	NR_034062,NM_001706	chr3,chr3	+,-	LOC100131635,BCL6	-187723,-144313
chr15:40732257-40732655	chr15	+	40732296	40732644	True	NR_002208,NM_014952	chr15,chr15	-,+	MRPL42P5,BAHD1	92155,766
chr19:6883742-6885075	chr19	+	6884017	6884901	True	NR_024075,NM_001974	chr19,chr19	-,+	EMR4P,EMR1	106013,2680
chr19:38182034-38182948	chr19	+	38182229	38182889	True	NM_001172226,NM_152605	chr19,chr19	+,-	ZNF540,ZNF781	-96556,377
chr12:27238040-27238514	chr12	+	27238257	27238555	True	NM_001080406,NM_004264	chr12,chr12	-,+	C12orf71,MED21	-2802,-62838
chr17:56558170-56560043	chr17	+	56558556	56559565	True	NM_001080439,NM_002876	chr17,chr17	-,+	HSF5,RAD51C	6253,210397
chr12:121080932-121081441	chr12	+	121080998	121081242	True	NM_031205,NM_001033677,NM_198202,NM_004276	chr12,chr12,chr12,chr12	+,+,-,+	CABP1,CABP1,POP5,CABP1	7128,-2627,-61797,7128
chr16:18800327-18800786	chr16	+	18800475	18800833	True	NM_001030009,NM_001019,NM_024847	chr16,chr16,chr16	-,-,+	RPS15A,RPS15A,TMC7	873,873,194422
chr8:37594305-37594510	chr8	+	37594320	37594550	True	NR_003671,NM_007175,NM_001003790,NM_001003791	chr8,chr8,chr8,chr8	-,+,+,+	LOC728024,ERLIN2,ERLIN2,ERLIN2	11064,-274,-172,-274
chr20:3221317-3222088	chr20	+	3221321	3222003	True	NM_001174090,NM_001174089,NM_032034,NM_181493	chr20,chr20,chr20,chr20	-,-,-,+	SLC4A11,SLC4A11,SLC4A11,ITPA	-2486,-1434,-2948,-31316
chrX:125605821-125606097	chrX	+	125605832	125606058	True	NM_001122716,NM_178470	chrX,chrX	+,-	CXorf64,DCAF12L1	347688,80834
chr8:120868283-120870278	chr8	+	120868480	120869475	True	NM_024094,NM_022783	chr8,chr8	-,+	DSCC1,DEPTOR	-310,16424
chr13:44187990-44189564	chr13	+	44188322	44189552	True	NM_001128303,NM_001127615	chr13,chr13	+,-	C13orf31,ENOX1	263867,14112
chr7:153583975-153584244	chr7	+	153583977	153584177	True	NM_007349,NM_001039350	chr7,chr7	-,+	PAXIP1,DPP6	1210555,241
chr9:129621311-129622175	chr9	+	129621391	129622098	True	NM_001099270,NM_012098	chr9,chr9	+,-	ZBTB34,ANGPTL2	845,263002
chr16:580630-581840	chr16	+	580648	581507	True	NM_005632,NR_024121	chr16,chr16	+,-	SOLH,NCRNA00235	-2843,-3241
chr12:124192833-124194760	chr12	+	124192837	124194393	True	NM_012463,NM_001414	chr12,chr12	+,-	ATP6V0A2,EIF2B1	2471,-74514
chrX:138773080-138773643	chrX	+	138773166	138773591	True	NM_001099855,NM_000133	chrX,chrX	-,+	MCF2,F9	16840,-160322
chr17:39661313-39661686	chr17	+	39661363	39661735	True	NM_005801,NM_002274,NM_153490	chr17,chr17,chr17	+,-,-	EIF1,KRT13,KRT13	183391,180,180
chr8:65489645-65490007	chr8	+	65489827	65490029	True	NM_152414,NR_015374	chr8,chr8	+,-	BHLHE22,LOC401463	2765,-7
chr20:1163427-1163841	chr20	+	1163547	1163811	True	NM_018354,NM_001009612	chr20,chr20	-,+	C20orf46,C20orf202	1356,20286
chr7:130353920-130354853	chr7	+	130353941	130354823	True	NM_012133,NR_029899	chr7,chr7	-,+	COPG2,MIR335	-343,-218040
chr8:82360632-82361840	chr8	+	82360707	82361886	True	NM_001444,NM_002677	chr8,chr8	+,-	FABP5,PMP2	-168040,-988
chr3:11685364-11686051	chr3	+	11685373	11685930	True	NM_001128219,NM_003178	chr3,chr3	-,+	VGLL4,SYN2	25,359931
chr11:74303280-74303594	chr11	+	74303285	74303595	True	NM_006591,NM_001144869	chr11,chr11	+,-	POLD3,LIPT2	33,-98530
chr17:62972672-62973391	chr17	+	62972790	62973182	True	NR_026903,NM_001165933	chr17,chr17	-,+	AMZ2P1,RGS9	-1087,160273
chr10:91139646-91140284	chr10	+	91139806	91140126	True	NM_001010987,NM_000235	chr10,chr10	+,-	IFIT1B,LIPA	-2051,-128146
chr1:53795109-53795497	chr1	+	53795137	53795461	True	NM_004631,NM_033300,NM_033067,NM_001018054,NM_017522	chr1,chr1,chr1,chr1,chr1	-,-,+,-,-	LRP8,LRP8,DMRTB1,LRP8,LRP8	-1411,-1316,129610,-1411,-1411
chr3:47020193-47020976	chr3	+	47020486	47020812	True	NM_144716,NM_015175	chr3,chr3	-,+	CCDC12,NBEAL2	-2216,360
chr17:66550535-66551760	chr17	+	66550551	66551789	True	NR_027751,NM_212472	chr17,chr17	-,+	FAM20A,PRKAR1A	2829,-42067
chr12:7341018-7341240	chr12	+	7341050	7341262	True	NM_000319,NM_031491,NM_001131026,NM_001131024,NM_001131025,NM_001131023	chr12,chr12,chr12,chr12,chr12,chr12	+,-,+,+,+,+	PEX5,RBP5,PEX5,PEX5,PEX5,PEX5	1695,-59584,496,1019,1019,1019
chr15:64996793-64997129	chr15	+	64996808	64997158	True	NM_001195059,NM_002537	chr15,chr15	+,-	PLEKHO2,OAZ2	136923,-1346
chr1:204163761-204164091	chr1	+	204163843	204164119	True	NM_005686,NM_002256	chr1,chr1	+,-	SOX13,KISS1	-121648,1550
chr1:243419537-243419793	chr1	+	243419711	243419835	True	NM_006642,NM_001042405,NM_001042404,NM_014812	chr1,chr1,chr1,chr1	+,-,-,-	SDCCAG8,CEP170,CEP170,CEP170	-461,-1003,-1003,-1003
chr1:86859624-86860021	chr1	+	86859637	86859928	True	NM_001184765,NM_001184766,NM_006536,NM_020729,NM_001007022	chr1,chr1,chr1,chr1,chr1	-,-,+,-,-	ODF2L,ODF2L,CLCA2,ODF2L,ODF2L	2154,2154,29840,2154,2154
chr15:25416770-25417774	chr15	+	25416886	25417584	True	NR_003304,NM_130838,NR_003298,NR_003299,NR_003301,NR_001291,NR_003302,NR_003296,NR_003297,NR_003294,NR_003295	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,-,+,+,+,+,+,+,+,+,+	SNORD115-12,UBE3A,SNORD115-6,SNORD115-7,SNORD115-9,SNORD115-1,SNORD115-10,SNORD115-4,SNORD115-5,SNORD115-2,SNORD115-3	6303,233119,8059,9947,6303,-1067,6303,4394,6300,197,2489
chr7:71873752-71874071	chr7	+	71873954	71874014	True	NR_001588,NM_031468	chr7,chr7	+,-	SBDSP1,CALN1	425937,3396
chr3:49234572-49236110	chr3	+	49234983	49235960	True	NM_178173,NM_001080528,NM_001135197	chr3,chr3,chr3	+,-,+	CCDC36,LOC646498,CCDC36	97,-5692,972
chr21:45078180-45078676	chr21	+	45078243	45078570	True	NM_015056,NM_007031	chr21,chr21	+,-	RRP1B,HSF2BP	861,855
chr18:11750519-11750877	chr18	+	11750530	11750898	True	NM_023075,NM_001142339,NM_002071	chr18,chr18,chr18	-,+,+	MPPE1,GNAL,GNAL	157793,663,663
chrX:119441851-119442366	chrX	+	119442025	119442344	True	NM_001104545,NM_001104544,NM_001142447,NM_017938	chrX,chrX,chrX,chrX	-,-,+,-	FAM70A,FAM70A,ATP1B4,FAM70A	3098,3098,53595,3098
chr2:108621621-108622120	chr2	+	108621628	108622058	True	NR_024439,NM_021815	chr2,chr2	-,+	LOC729121,SLC5A7	-179045,-18684
chr1:207065323-207066381	chr1	+	207065361	207066344	True	NM_001185157,NM_001185156,NM_001185158,NM_006850,NM_001193338	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	IL24,IL24,IL24,IL24,FAIM3	4443,4443,4443,4443,28954
chr3:50655077-50655465	chr3	+	50655092	50655434	True	NM_013324,NM_145071,NM_004635	chr3,chr3,chr3	-,-,+	CISH,CISH,MAPKAPK3	-5830,-5830,-542
chr1:16093381-16093753	chr1	+	16093679	16093755	True	NM_001024215,NM_001024216,NM_001089591,NM_017556	chr1,chr1,chr1,chr1	+,+,-,+	FBLIM1,FBLIM1,UQCRHL,FBLIM1	-2736,-2271,40489,-8475
chr1:11989963-11990879	chr1	+	11989989	11990862	True	NM_000302,NM_138346	chr1,chr1	+,-	PLOD1,KIAA2013	3861,-3504
chr21:43813527-43814851	chr21	+	43813632	43814735	True	NM_018961,NM_024022,NM_032405,NM_001001895,NR_027348	chr21,chr21,chr21,chr21,chr21	+,-,-,+,-	UBASH3A,TMPRSS3,TMPRSS3,UBASH3A,TMPRSS3	9283,1516,1516,9283,-4379
chr9:46296447-46297924	chr9	+	46296581	46297621	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2665851,389944
chr9:46296447-46297924	chr9	-	45086559	45086628	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-96379,-1455829
chr9:46296447-46297924	chr9	-	46207609	46207678	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2576879,479887
chr19:21942515-21943853	chr19	+	21942552	21943902	True	NR_024523,NM_173531	chr19,chr19	+,-	LOC641367,ZNF100	-9063,6579
chr1:46016860-46017165	chr1	+	46017034	46017202	True	NM_001202414,NM_153326,NM_006066,NM_001202431,NM_001202413	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	AKR1A1,AKR1A1,AKR1A1,PRDX1,AKR1A1	-637,-637,-637,-28472,-637
chr9:46272005-46272359	chr9	+	46272047	46272369	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2641317,415196
chr9:46272005-46272359	chr9	+	67680964	67681286	False	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	112953,245474
chr9:46272005-46272359	chr9	-	47168171	47168493	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-3537441,-480656
chr9:46272005-46272359	chr9	+	44759726	44760048	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	230187,-1128996
chr9:46272005-46272359	chr9	-	45110950	45111272	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-120765,-1480220
chr17:18626224-18627310	chr17	+	18626652	18627288	True	NM_001145045,NM_001037330	chr17,chr17	-,+	ZNF286B,TRIM16L	-41080,-1301
chr17:18626224-18627310	chr17	-	15544391	15545027	False	NM_006382,NM_001130842	chr17,chr17	-,+	CDRT1,ZNF286A	-21373,57863
chrX:72163762-72164215	chrX	+	72163887	72164204	True	NR_034116,NR_026594,NR_026595	chrX,chrX,chrX	+,-,-	LOC100129407,NCRNA00246B,NCRNA00246	-5936,-298,-298
chrX:72163762-72164215	chrX	-	71996287	71996604	False	NR_034116,NM_001080851	chrX,chrX	-,+	LOC100129407,DMRTC1B	5931,68271
chr5:70376294-70377082	chr5	+	70376445	70376785	True	NM_022877,NR_026578	chr5,chr5	+,-	SMN2,LOC647859	-155729,12162
chr5:70376294-70377082	chr5	-	68842764	68843105	False	NR_027439,NM_001098728	chr5,chr5	-,+	LOC100272216,GTF2H2C	85974,12945
chr17:32689045-32689739	chr17	+	32689218	32689764	True	NM_005408,NM_002981	chr17,chr17	+,-	CCL13,CCL1	-5798,538
chr5:76786988-76787765	chr5	+	76787265	76787700	True	NM_003719,NM_018268	chr5,chr5	+,-	PDE8B,WDR41	-280616,682
chr13:25158466-25159260	chr13	+	25158552	25159187	True	NM_006437,NR_002815	chr13,chr13	-,+	PARP4,LOC374491	-71604,-4263
chr13:25158466-25159260	chr13	-	25538167	25538223	False	NR_026730,NM_030979	chr13,chr13	-,+	TPTE2P1,PABPC3	4434,132052
chrX:13838646-13839806	chrX	+	13838769	13839620	True	NM_001001996,NM_001001995,NM_003611,NM_005278	chrX,chrX,chrX,chrX	-,-,+,-	GPM6B,GPM6B,OFD1,GPM6B	-3455,-3455,-85997,-3455
chr9:137007194-137008306	chr9	+	137007361	137008169	True	NR_023344,NM_017588,NM_052821	chr9,chr9,chr9	-,+,+	RNU6ATAC,WDR5,WDR5	21567,-6203,-2499
chr20:2635509-2635992	chr20	+	2635519	2636033	True	NR_004399,NR_002981,NR_002738,NR_003078,NM_006899,NR_027700,NM_006392,NR_031699,NR_002739,NM_174855,NM_174856	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,+,+,+,-,+,+,+,+,-,-	SNORD86,SNORA51,SNORD57,SNORD110,IDH3B,NOP56,NOP56,MIR1292,SNORD56,IDH3B,IDH3B	709,17,1551,-712,8860,-2316,-2316,-2147,1236,8860,8860
chrX:134096773-134097714	chrX	+	134096796	134097602	True	NM_019556,NM_001163438	chrX,chrX	-,+	MOSPD1,LOC644538	-47499,27365
chr11:33182735-33183044	chr11	+	33182757	33183027	True	NR_034027,NM_001033505,NM_001033506,NM_001326	chr11,chr11,chr11,chr11	+,-,-,-	LOC338739,CSTF3,CSTF3,CSTF3	175,60,60,60
chr20:33416601-33417671	chr20	+	33416992	33417485	True	NR_002165,NR_028046,NM_014071	chr20,chr20,chr20	-,+,-	HMGB3P1,ACSS2,NCOA6	4838,45280,-3559
chr12:53297817-53298235	chr12	+	53297826	53298208	True	NM_199187,NM_002273	chr12,chr12	+,-	KRT18,KRT8	44446,710
chr3:167369506-167369738	chr3	+	167369585	167369785	True	NM_178824,NM_001122752	chr3,chr3	-,+	WDR49,SERPINI1	1554,83646
chr11:60266517-60267636	chr11	+	60266678	60267248	True	NM_022349,NM_017716,NM_001164470	chr11,chr11,chr11	-,+,+	MS4A6A,MS4A12,MS4A12	-316004,-6478,-6478
chr17:34125121-34125712	chr17	+	34125149	34125729	True	NM_001032278,NM_024302,NM_139215	chr17,chr17,chr17	-,-,+	MMP28,MMP28,TAF15	-2509,-2509,10758
chr16:81130840-81132052	chr16	+	81130870	81132078	True	NM_004483,NR_033249,NR_033247,NM_015251	chr16,chr16,chr16,chr16	-,-,-,+	GCSH,GCSH,LOC100329108,ATMIN	-890,-890,-916,-61463
chr14:32031283-32031608	chr14	+	32031314	32031616	True	NR_036675,NM_025152	chr14,chr14	-,+	GPR33,NUBPL	-74163,-776
chr7:26897309-26897663	chr7	+	26897388	26897678	True	NM_003930,NM_001145531	chr7,chr7	-,+	SKAP2,C7orf71	6713,-219949
chr6:31972539-31973539	chr6_dbb_hap3	+	3258211	3258947	False	NR_001284,NM_001128590,NM_032454,NM_032470,NM_007293,NM_001002029,NM_000500,NM_004197	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	-,+,+,-,+,+,+,+	TNXA,CYP21A2,STK19,TNXB,C4A,C4B,CYP21A2,STK19	7486,-6,8153,7736,9207,9207,-6,8153
chr6:31972539-31973539	chr6	+	31972628	31973364	True	NR_001284,NM_001128590,NM_032454,NM_032470,NM_007293,NM_001002029,NM_000500,NM_004197	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,+,+,-,+,+,+,+	TNXA,CYP21A2,STK19,TNXB,C4A,C4B,CYP21A2,STK19	7486,-6,8153,7736,9207,9207,-6,8153
chr6:31972539-31973539	chr6_ssto_hap7	+	3305338	3306074	False	NR_001284,NM_001128590,NM_032454,NM_032470,NM_007293,NM_001002029,NM_000500,NM_004197	chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7	-,+,+,-,+,+,+,+	TNXA,CYP21A2,STK19,TNXB,C4A,C4B,CYP21A2,STK19	7486,-6,8153,7736,9207,9207,-6,8153
chr17:14141254-14142083	chr17	+	14141450	14142123	True	NM_001007530,NM_006041	chr17,chr17	-,+	CDRT15,HS3ST3B1	-1300,62382
chr17:14141254-14142083	chr17	-	13925851	13926060	False	NR_003261,NM_001007530	chr17,chr17	+,-	CDRT15P,CDRT15	1754,214140
chr18:33707783-33708336	chr18	+	33707993	33708349	True	NM_012319,NM_018255,NM_001099406	chr18,chr18,chr18	-,+,-	SLC39A6,ELP2,SLC39A6	1062,1537,1062
chr16:57226424-57227697	chr16	+	57226508	57227704	True	NM_133368,NM_024946	chr16,chr16	+,-	RSPRY1,FAM192A	-6330,-6532
chr16:30760159-30760714	chr16	+	30760177	30760666	True	NM_001172432,NM_000294,NM_001014979	chr16,chr16,chr16	+,+,-	PHKG2,PHKG2,C16orf93	-608,-608,12956
chr1:247332578-247333902	chr1	+	247332582	247333313	True	NM_173858,NM_003431	chr1,chr1	+,-	VN1R5,ZNF124	86060,2055
chr1:247332578-247333902	chr1	-	247291731	247291995	False	NM_173858,NM_207401	chr1,chr1	+,-	VN1R5,C1orf229	127378,-16012
chr8:135794813-135795753	chr8	+	135795164	135795578	True	NR_029666,NR_002438	chr8,chr8	-,+	MIR30B,ZFAT-AS1	17322,-184909
chr2:198300150-198300710	chr2	+	198300321	198300748	True	NM_025147,NM_001005526,NM_012433	chr2,chr2,chr2	+,-,-	COQ10B,SF3B1,SF3B1	17482,-550,-550
chrX:153045407-153046173	chrX	+	153045423	153046097	True	NM_014370,NM_001170760,NM_001170761,NM_004135	chrX,chrX,chrX,chrX	+,+,+,-	SRPK3,SRPK3,SRPK3,IDH3G	358,358,358,13920
chr9:69724857-69726456	chr9	+	69725317	69725376	True	NM_001126334,NR_024443	chr9,chr9	-,+	FOXD4L5,LOC100133920	453498,-74016
chr9:69724857-69726456	chr9	-	66957003	66957062	False	NR_024443,NR_024496	chr9,chr9	-,+	LOC100133920,LOC442421	73979,-462794
chr9:69724857-69726456	chr9	+	67341365	67341424	False	NM_032250,NR_002817	chr9,chr9	+,-	ANKRD20A1,AQP7P1	585336,-51873
chr11:112045144-112046401	chr11	+	112045369	112046284	True	NM_001562,NM_031938,NM_001037290,NM_031275	chr11,chr11,chr11,chr11	-,+,+,+	IL18,BCO2,BCO2,TEX12	-10529,30,804,-7336
chr18:74471185-74471469	chr18	+	74471213	74471431	True	NM_007345,NM_001025081	chr18,chr18	+,-	ZNF236,MBP	64684,257674
chr4:100732221-100733272	chr4	+	100732402	100733286	True	NM_021970,NM_014395	chr4,chr4	-,+	LAMTOR3,DAPP1	82467,4694
chr11:9403115-9403510	chr11	+	9403191	9403259	True	NM_006391,NM_001165030	chr11,chr11	+,-	IPO7,TMEM41B	2909,-66895
chr15:45053274-45053956	chr15	+	45053403	45054005	True	NM_182985,NM_001145112	chr15,chr15	+,-	TRIM69,PATL2	-24894,-84317
chr8:94709665-94711642	chr8	+	94710214	94711535	True	NM_145269,NR_033858	chr8,chr8	+,-	FAM92A1,LOC642924	1237,1183
chr2:233391396-233391863	chr2	+	233391419	233391731	True	NM_001195129,NM_145702,NM_000751	chr2,chr2,chr2	+,-,+	PRSS56,TIGD1,CHRND	-6297,23545,-548
chr3:46720473-46720770	chr3	+	46720511	46720767	True	NM_182775,NM_147196	chr3,chr3	-,+	ALS2CL,TMIE	-1612,22055
chr15:40731947-40732257	chr15	+	40731948	40732044	True	NR_002208,NM_014952	chr15,chr15	-,+	MRPL42P5,BAHD1	92755,1366
chr19:5339793-5340009	chr19	+	5339994	5340058	True	NM_130854,NM_130855,NM_002850,NM_181710,NM_130853	chr19,chr19,chr19,chr19,chr19	-,-,-,+,-	PTPRS,PTPRS,PTPRS,ZNRF4,PTPRS	806,806,806,115367,806
chr12:185410-186288	chr12	+	185512	186272	True	NM_015232,NM_001170738,NR_026823	chr12,chr12,chr12	+,+,-	IQSEC3,IQSEC3,FAM138D	269,-9514,-36100
chr12:185410-186288	chr20	-	62949567	62949741	False	NM_001104925,NM_005286	chr20,chr20	+,-	PCMTD2,NPBWR2	-62570,-211383
chr12:54363047-54363339	chr12	+	54363051	54363387	True	NM_014212,NR_003716	chr12,chr12	+,-	HOXC11,HOTAIR	3522,-536
chr1:150601516-150601902	chr1	+	150601625	150601781	True	NM_207168,NM_004436,NM_207045,NM_207046,NM_207047,NM_207042,NM_207043,NM_207044,NR_036211	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,-,-,-,+	ENSA,ENSA,ENSA,ENSA,ENSA,ENSA,ENSA,ENSA,MIR4257	367,367,-16,-16,-16,367,367,367,-77271
chr10:11049643-11049925	chr10	+	11049648	11049966	True	NR_024411,NM_006561,NM_001025077	chr10,chr10,chr10	-,+,+	LOC254312,CELF2,CELF2	-55522,9926,-2440
chr9:124136470-124137611	chr9	+	124137156	124137640	True	NM_004099,NM_000177,NM_198194	chr9,chr9,chr9	-,+,-	STOM,GSN,STOM	-4611,-75140,-4611
chr10:127572046-127572534	chr10	+	127572060	127572578	True	NM_018180,NM_145235	chr10,chr10	-,+	DHX32,FANK1	-2176,12529
chr2:152267214-152268074	chr2	+	152267248	152267788	True	NM_004688,NM_001177663,NM_018151,NM_001177664,NM_001177665	chr2,chr2,chr2,chr2,chr2	-,+,+,+,+	NMI,RIF1,RIF1,RIF1,RIF1	-120818,-902,-902,-899,-695
chr4:108860173-108861535	chr4	+	108860346	108861132	True	NM_005443,NM_183075	chr4,chr4	-,+	PAPSS1,CYP2U1	-218927,-7681
chr10:10994286-10994493	chr10	+	10994331	10994525	True	NM_001025077,NR_024411,NR_024410,NR_015413	chr10,chr10,chr10,chr10	+,-,-,-	CELF2,LOC254312,LOC254312,LOC254312	52733,-205,-205,-205
chr21:45876861-45877225	chr21	+	45876912	45877224	True	NM_198691,NM_030891	chr21,chr21	-,+	KRTAP10-1,LRRC3	82904,-1570
chr17:40989056-40990194	chr17	+	40989572	40990226	True	NM_176863,NM_001158,NM_009590,NM_005789,NM_003766	chr17,chr17,chr17,chr17,chr17	+,+,+,+,-	PSME3,AOC2,AOC2,PSME3,BECN1	-4200,6382,6382,-4200,-13262
chr1:230995453-230997383	chr1	+	230995599	230997295	True	NM_016452,NM_032800,NM_001136495,NM_001136494	chr1,chr1,chr1,chr1	+,-,-,-	CAPN9,C1orf198,C1orf198,C1orf198	-112502,7057,-3817,8090
chr3:118753712-118753928	chr3	+	118753740	118753866	True	NM_152539,NM_001015887	chr3,chr3	+,-	C3orf30,IGSF11	111130,-64
chr16:28567911-28569517	chr16	+	28568365	28569257	True	NM_138414,NM_012385	chr16,chr16	+,-	CCDC101,NUPR1	-3173,-17870
chr6:3072816-3073962	chr6	+	3072904	3073900	True	NR_033884,NM_003804	chr6,chr6	-,+	LOC401233,RIPK1	-47899,3157
chrX:153989914-153990240	chrX	+	153989939	153990240	True	NM_080612,NR_002969,NM_001363,NM_001142463	chrX,chrX,chrX,chrX	-,+,+,+	GAB3,SNORA36A,DKC1,DKC1	-10591,6562,790,790
chr1:10511061-10511518	chr1	+	10511093	10511503	True	NM_004401,NM_001302	chr1,chr1	-,+	DFFA,CORT	21160,-1368
chr6:46787397-46787606	chr6	+	46787399	46787655	True	NM_001168357,NM_005588	chr6,chr6	-,+	PLA2G7,MEP1A	-83969,-26357
chr19:17354492-17354825	chr19	+	17354534	17354850	True	NM_005234,NM_024578	chr19,chr19	-,+	NR2F6,OCEL1	1351,-17530
chr1:150949222-150949827	chr1	+	150949481	150949772	True	NM_003568,NM_022075,NM_181746	chr1,chr1,chr1	+,-,-	ANXA9,LASS2,LASS2	4726,-2041,-2041
chr14:96504669-96504871	chr14	+	96504754	96504858	True	NR_023938,NM_021966	chr14,chr14	+,-	C14orf132,TCL1A	803,-324221
chr22:24997979-24998972	chr22	+	24998001	24998481	True	NM_005265,NM_207644,NM_001032365,NM_001032364	chr22,chr22,chr22,chr22	+,-,+,+	GGT1,C22orf36,GGT1,GGT1	698,-8966,5144,642
chr10:70321872-70322447	chr10	+	70322025	70322472	True	NM_030625,NM_152707	chr10,chr10	+,-	TET1,SLC25A16	-1959,-34745
chr17:7019395-7020282	chr17	+	7019534	7019922	True	NM_080913,NM_080912,NM_001181,NM_080914,NM_001201352,NM_201566	chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,+	ASGR2,ASGR2,ASGR2,ASGR2,ASGR2,SLC16A13	-1404,-1404,-1404,-1905,-1404,-80191
chr2:86088833-86089439	chr2	+	86088842	86089480	True	NM_032827,NM_001042437	chr2,chr2	+,-	ATOH8,ST3GAL5	-107988,5367
chr9:21031153-21031633	chr9	+	21031156	21031222	True	NR_030166,NM_001010915	chr9,chr9	+,-	MIR491,PTPLAD2	-315103,467
chr21:27104019-27104996	chr21	+	27104019	27104577	True	NM_001003701,NM_002040,NM_001003703,NM_001003697,NM_001003696,NM_001197297,NM_001685	chr21,chr21,chr21,chr21,chr21,chr21,chr21	-,+,-,-,-,+,-	ATP5J,GABPA,ATP5J,ATP5J,ATP5J,GABPA,ATP5J	3438,2751,3438,3438,3438,2680,3438
chr8:101324386-101324871	chr8	+	101324388	101324542	True	NM_183419,NM_003114,NM_015435	chr8,chr8,chr8	-,+,-	RNF19A,SPAG1,RNF19A	-2061,-153876,-8901
chr3:49590254-49590833	chr3	+	49590407	49590869	True	NM_032316,NM_003458	chr3,chr3	-,+	NICN1,BSN	-123650,1052
chr7:26445858-26447697	chr7	+	26445890	26447604	True	NR_022006,NR_015364	chr7,chr7	-,+	KIAA0087,LOC441204	130893,-2834
chr22:38071202-38071444	chr22	+	38071222	38071364	True	NM_002305,NM_006498	chr22,chr22	+,-	LGALS1,LGALS2	248,-95198
chr1:46920125-46921794	chr1	+	46920321	46921821	True	NM_147192,NM_001097611	chr1,chr1	+,-	DMBX1,KNCN	50846,95116
chr1:69347948-69348515	chr1	+	69348092	69348547	True	NM_017779,NM_020794	chr1,chr1	-,+	DEPDC1,LRRC7	-385293,877310
chr2:149633658-149633976	chr2	+	149633689	149633844	True	NM_015702,NM_004522	chr2,chr2	-,+	MMADHC,KIF5C	810536,-921
chrX:19806015-19807096	chrX	+	19806023	19806917	True	NM_001173456,NM_001024666	chrX,chrX	+,-	PDHA1,SH3KBP1	-444065,11061
chr12:120971151-120971530	chr12	+	120971282	120971536	True	NM_014868,NM_032314	chr12,chr12	+,-	RNF10,COQ5	595,-4318
chr7:143742508-143743653	chr7	+	143742768	143743676	True	NM_014719,NM_012365	chr7,chr7	-,+	FAM115A,OR2A5	-143596,3818
chr16:4854049-4854504	chr16	+	4854076	4854438	True	NM_024589,NR_029455	chr16,chr16	-,+	ROGDI,LOC440335	-1402,-8748
chr17:44343385-44344048	chr17_ctg5_hap1	-	521953	522546	False	NM_001193465,NM_014834	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	KIAA1267,LRRC37A	40951,-63349
chr17:44343385-44344048	chr17_ctg5_hap1	+	1210491	1211084	False	NR_026901,NR_037772	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LOC644172,CRHR1	-22110,-40038
chr17:44343385-44344048	chr17	+	44343445	44344038	True	NM_001193465,NM_014834	chr17,chr17	-,+	KIAA1267,LRRC37A	-40705,28458
chr17:44343385-44344048	chr17	-	65992440	65992490	False	NM_002266,NM_181656,NM_181655	chr17,chr17,chr17	+,-,-	KPNA2,C17orf58,C17orf58	39357,-2675,-2675
chr4:30721246-30721734	chr4	+	30721385	30721729	True	NM_002589,NM_000730,NM_032457,NM_001173523,NM_032456	chr4,chr4,chr4,chr4,chr4	+,-,+,+,+	PCDH7,CCKAR,PCDH7,PCDH7,PCDH7	307,-4229343,307,307,300
chr10:104218496-104219245	chr10	+	104218560	104219175	True	NM_024789,NM_024886	chr10,chr10	+,-	TMEM180,C10orf95	1994,-7260
chr1:150658509-150659909	chr1	+	150658952	150659761	True	NM_018178,NR_036211	chr1,chr1	-,+	GOLPH3L,MIR4257	9973,-134598
chr1:182558162-182558546	chr1	+	182558230	182558544	True	NR_036490,NM_021133	chr1,chr1	+,-	LOC284648,RNASEL	25730,-80
chr8:38835979-38836435	chr8	+	38836013	38836199	True	NM_001024380,NM_153692	chr8,chr8	-,+	TM2D2,HTRA4	17892,-4396
chr1:34652936-34654318	chr1	+	34652957	34654290	True	NM_001134734,NM_052896	chr1,chr1	+,-	C1orf94,CSMD2	-10455,-21514
chr7:62765631-62766220	chr7	+	62765923	62766270	True	NR_028348,NR_003952	chr7,chr7	+,-	LOC100287704,LOC643955	43177,-1489
chr7:62765631-62766220	chr7	+	57201585	57201644	False	NM_033273,NR_036102	chr7,chr7	-,+	ZNF479,MIR3147	5986,271086
chr7:62765631-62766220	chr7	-	62902674	62903021	False	NR_028349	chr7	-	LOC100287834	-43255
chrX:53077299-53077521	chrX	+	53077299	53077459	True	NM_018969,NM_014138	chrX,chrX	+,-	GPR173,FAM156A	1046,-91123
chr6:10416597-10416893	chr6	+	10416722	10416878	True	NM_001032280,NM_001042425,NM_003220,NR_033910	chr6,chr6,chr6,chr6	-,-,-,+	TFAP2A,TFAP2A,TFAP2A,LOC100130275	-4115,2969,-1252,-4222
chr21:15221297-15221657	chr21	+	15221333	15221647	True	NM_174981,NR_026755	chr21,chr21	+,-	POTED,C21orf15	-238898,-648
chr4:71386970-71387427	chr4	+	71387171	71387361	True	NM_144646,NM_212557	chr4,chr4	-,+	IGJ,AMTN	145041,-2936
chr4:141483458-141484852	chr4	+	141483467	141484657	True	NM_021833,NM_153702	chr4,chr4	-,+	UCP1,ELMOD2	5352,-38206
chr1:213032335-213032574	chr1	+	213032526	213032620	True	NM_014053,NR_027286,NR_027285	chr1,chr1,chr1	+,-,-	FLVCR1,NCRNA00292,NCRNA00292	-984,-1046,-1046
chr4:99581089-99581959	chr4	+	99581142	99581731	True	NM_005723,NM_015143	chr4,chr4	-,+	TSPAN5,METAP1	-1330,335056
chr13:27998113-27998692	chr13	+	27998324	27998598	True	NM_002097,NM_001166262	chr13,chr13	+,-	GTF3A,MTIF3	82,25778
chr4:122299727-122301275	chr4	+	122299867	122301270	True	NM_198179,NR_024365	chr4,chr4	-,+	QRFPR,LOC100192379	961,384469
chr1:27017847-27018817	chr1	+	27018269	27018858	True	NM_018066,NM_139135,NM_006015	chr1,chr1,chr1	-,+,+	GPN2,ARID1A,ARID1A	198061,3663,3663
chr17:37309193-37309436	chr17	+	37309193	37309433	True	NM_020405,NM_000981	chr17,chr17	-,+	PLXDC1,RPL19	-1291,47102
chr19:46293833-46295022	chr19	+	46293942	46294952	True	NM_004943,NM_004409,NM_001081560,NM_004497,NM_001081562	chr19,chr19,chr19,chr19,chr19	-,-,-,+,-	DMWD,DMPK,DMPK,FOXA3,DMPK	1158,-8127,-8127,72565,-8127
chr19:50273249-50273817	chr19	+	50273421	50273799	True	NM_021733,NM_130787,NM_014203	chr19,chr19,chr19	-,+,+	TSKS,AP2A1,AP2A1	-6906,-3299,-3299
chr2:220072751-220074107	chr2	+	220072772	220073884	True	NM_138802,NM_005689	chr2,chr2	+,-	ZFAND2B,ABCB6	-1285,9878
chr1:23885491-23885747	chr1	+	23885529	23885727	True	NM_002167,NR_027042	chr1,chr1	-,+	ID3,MDS2	645,68096
chr22:26962938-26963569	chr22	+	26963127	26963597	True	NM_001008566,NM_001886	chr22,chr22	-,+	TPST2,CRYBA4	-1757,54330
chr3:182695682-182696700	chr3	+	182695969	182696678	True	NM_014616,NM_020640	chr3,chr3	+,-	ATP11B,DCUN1D1	-184736,1699
chr16:70149526-70150738	chr16	+	70149565	70150549	True	NM_017990,NR_003610	chr16,chr16	+,-	PDPR,PDXDC2P	-2088,-49714
chr16:70149526-70150738	chr16	-	74400334	74400692	False	NR_026950,NM_002811	chr16,chr16	-,+	LOC283922,PSMD7	1511,-69712
chr17:64871600-64872167	chr17	+	64871642	64872182	True	NM_014877,NM_145811	chr17,chr17	-,+	HELZ,CACNG5	369187,1208
chr17:26878166-26878845	chr17	+	26878352	26878844	True	NM_054035,NM_005148,NM_003593	chr17,chr17,chr17	-,-,+	UNC119,UNC119,FOXN1	852,852,-27444
chr2:201678218-201679013	chr2	+	201678270	201679062	True	NM_001162407,NM_014670	chr2,chr2	-,+	CLK1,BZW1	50272,-1683
chr8:54939543-54940342	chr8	+	54939627	54940250	True	NM_201437,NM_014175,NM_006756	chr8,chr8,chr8	-,+,-	TCEA1,MRPL15,TCEA1	-4619,107530,-4619
chr1:247277921-247278643	chr1	+	247278003	247278543	True	NM_173858,NM_207401	chr1,chr1	+,-	VN1R5,C1orf229	140830,-2284
chr11:778206-778639	chr11	+	778416	778616	True	NM_006755,NM_182612	chr11,chr11	+,-	TALDO1,PDDC1	-31035,-929
chr1:43855206-43855469	chr1	+	43855378	43855518	True	NM_001012961,NM_201542,NM_052877	chr1,chr1,chr1	+,-,-	C1orf84,MED8,MED8	37,15,15
chr20:54823428-54824801	chr20	+	54823588	54824810	True	NM_003600,NM_019888	chr20,chr20	-,+	AURKA,MC3R	142591,-31
chr8:105352417-105353090	chr8	+	105352436	105353072	True	NM_001385,NM_030788	chr8,chr8	-,+	DPYS,TM7SF4	126255,-442
chr4:119859396-119861181	chr4	+	119859807	119861003	True	NM_133477,NM_014822	chr4,chr4	+,-	SYNPO2,SEC24D	-49873,-102481
chr12:26379993-26380283	chr12	+	26379993	26380325	True	NM_005086,NM_030762	chr12,chr12	+,-	SSPN,BHLHE41	-31545,-101990
chr11:10325197-10326055	chr11	+	10325252	10326045	True	NM_030962,NM_001124	chr11,chr11	-,+	SBF2,ADM	-9498,596
chr5:134331298-134331880	chr5	+	134331307	134331715	True	NM_002653,NM_178019	chr5,chr5	-,+	PITX1,CATSPER3	38299,-27762
chr5:178485356-178487121	chr5	+	178485642	178487110	True	NM_014594,NM_000843	chr5,chr5	+,-	ZNF354C,GRM6	496,-63518
chr6:41910459-41910707	chr6	+	41910459	41910605	True	NM_001760,NM_004053,NM_001136125	chr6,chr6,chr6	-,+,-	CCND3,BYSL,CCND3	-907,-21545,-907
chr18:12408350-12408602	chr18	+	12408407	12408599	True	NM_006796,NM_001142405,NM_006553	chr18,chr18,chr18	-,+,+	AFG3L2,SLMO1,SLMO1	-31132,-563,-563
chr14:54906561-54907627	chr14	+	54906578	54907612	True	NM_005776,NM_005192	chr14,chr14	-,+	CNIH,CDKN3	586,-42965
chr15:31129034-31129452	chr15	+	31129040	31129258	True	NM_017762,NM_001146095	chr15,chr15	-,+	MTMR10,FAN1	154599,66796
chr15:31129034-31129452	chr15	-	28387342	28387402	False	NM_000275,NR_033351	chr15,chr15	-,+	OCA2,GOLGA8F	-42884,236381
chr6:136211567-136211895	chr6	+	136211578	136211869	True	NM_001099286,NM_018945	chr6,chr6	-,+	FAM54A,PDE7B	359639,-38809
chr7:133999378-134001218	chr7	+	133999923	134001241	True	NM_144648,NM_032826	chr7,chr7	+,-	LRGUK,SLC35B4	-187870,636
chr1:99428429-99429122	chr1	+	99428566	99429162	True	NR_033940,NM_001010861	chr1,chr1	+,-	LOC100129620,LPPR5	40669,41337
chr2:9348007-9349991	chr2	+	9348048	9349521	True	NM_003887,NM_001135191,NM_138799	chr2,chr2,chr2	+,+,-	ASAP2,ASAP2,MBOAT2	-1205,-1205,-204172
chr14:90798724-90798924	chr14	+	90798757	90798973	True	NM_199043,NM_017970,NM_006888	chr14,chr14,chr14	-,-,+	C14orf102,C14orf102,CALM1	-478,-478,64353
chrX:56776175-56777248	chrX	+	56776504	56777051	True	NR_015367,NR_002308	chrX,chrX	+,-	LOC550643,LOC442454	-20845,-12487
chr1:202162126-202162336	chr1	+	202162132	202162368	True	NR_037664,NM_001017403	chr1,chr1	-,+	PTPN7,LGR6	-31416,749
chr6:170190773-170192130	chr6	+	170190789	170192059	True	NR_026781,NR_026780	chr6,chr6	-,+	NCRNA00242,C6orf208	6912,-672
chr11:55652112-55652439	chr11	+	55652183	55652487	True	NM_032681,NM_001001960	chr11,chr11	+,-	SPRYD5,OR5W2	-1469,29621
chr7:39683261-39684641	chr7	+	39683496	39684599	True	NM_138701,NM_005402	chr7,chr7	-,+	C7orf11,RALA	489710,-20408
chr6:130340027-130340228	chr6	+	130340069	130340134	True	NM_001007102,NM_032438,NM_001010876	chr6,chr6,chr6	+,+,-	L3MBTL3,L3MBTL3,C6orf191	-392,-392,-157653
chr17:14203870-14204354	chr17	+	14203941	14204307	True	NR_026880,NM_006041,NM_001007530	chr17,chr17,chr17	+,+,-	MGC12916,HS3ST3B1,CDRT15	2749,198,-63791
chr2:166810699-166811351	chr2	+	166810709	166811365	True	NM_024969,NM_024753	chr2,chr2	+,-	CSRNP3,TTC21B	-381914,-361
chrX:129993909-129995429	chrX	+	129994326	129995444	True	NM_144967,NM_006375	chrX,chrX	+,-	ARHGAP36,ENOX2	196771,41820
chr6:37665611-37666304	chr6	+	37665734	37666328	True	NM_153487,NM_021943	chr6,chr6	-,+	MDGA1,ZFAND3	20,120978
chr16:67696179-67697135	chr16	+	67696187	67697123	True	NM_016948,NM_001082487,NM_001082486,NM_022914,NM_001012984,NM_032140,NM_001037281	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,-,+,-,+	PARD6A,ACD,ACD,ACD,C16orf86,C16orf48,PARD6A	-1387,-1469,-1469,-1469,3593,3555,-1387
chr6:11770780-11771220	chr6	+	11770902	11771178	True	NM_001143948,NM_032744,NM_001100829	chr6,chr6,chr6	-,-,+	C6orf105,C6orf105,TMEM170B	8152,8152,-232444
chr9:65617744-65618710	chr9	+	65617824	65618559	True	NR_024496,NM_015667	chr9,chr9	+,-	LOC442421,FAM75A7	875709,-108214
chr9:65617744-65618710	chr9	+	43876213	43876948	False	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	-245483,-191389
chr9:65617744-65618710	chr9	-	39117547	39117638	False	NM_033655,NM_001085452	chr9,chr9	-,+	CNTNAP3,FAM75A1	170726,238060
chr9:65617744-65618710	chr9	+	40293250	40293985	False	NR_026803,NM_033160	chr9,chr9	+,-	FAM74A1,ZNF658	-393111,498187
chr1:154292649-154293649	chr1	+	154293266	154293646	True	NM_080429,NM_020452,NM_138740,NM_001005855	chr1,chr1,chr1,chr1	+,+,-,+	AQP10,ATP8B2,C1orf43,ATP8B2	17,6629,-99993,4389
chr12:121837569-121837794	chr12	+	121837586	121837836	True	NM_001137559,NM_194271,NM_025126	chr12,chr12,chr12	-,+,+	ANAPC5,RNF34,RNF34	-45574,65,65
chr1:203314993-203316603	chr1	+	203315113	203316593	True	NM_002023,NM_006763	chr1,chr1	-,+	FMOD,BTG2	3746,-40500
chr16:6068658-6068913	chr16	+	6068658	6068952	True	NM_018723,NM_001142333,NM_201598	chr16,chr16,chr16	+,+,-	RBFOX1,RBFOX1,FAM86A	179,179,-920869
chr14:24048553-24049811	chr14	+	24048815	24049602	True	NM_001146028,NR_023314,NM_032452	chr14,chr14,chr14	-,+,-	JPH4,THTPA,JPH4	-806,-23668,-806
chr3:170138238-170138578	chr3	+	170138272	170138572	True	NM_005602,NM_020949,NM_001185056	chr3,chr3,chr3	+,-,+	CLDN11,SLC7A14,CLDN11	-1671,165341,455
chr19:49338971-49339305	chr19	+	49339037	49339353	True	NM_014330,NM_016246	chr19,chr19	+,-	PPP1R15A,HSD17B14	36295,631
chr4:39042000-39043795	chr4	+	39042150	39043433	True	NM_024943,NM_001171654,NM_001007075	chr4,chr4,chr4	-,+,+	TMEM156,KLHL5,KLHL5	-8109,3017,3017
chr1:204485979-204486654	chr1	+	204486012	204486510	True	NM_001204171,NM_002646,NM_001204172,NR_024171,NM_002393	chr1,chr1,chr1,chr1,chr1	+,-,+,+,+	MDM4,PIK3C2B,MDM4,MDM4,MDM4	-557,-26538,-557,-557,-557
chr7:76786154-76787995	chr7	+	76786406	76787663	True	NM_020879,NM_006682	chr7,chr7	+,-	CCDC146,FGL2	-34524,41550
chr7:76786154-76787995	chr7	-	102353237	102354488	False	NM_032959,NM_001145268	chr7,chr7	-,+	POLR2J2,FAM185A	-41055,34910
chr3:137913043-137914042	chr3	+	137913499	137913841	True	NM_014154,NM_015396,NM_213654,NM_016216	chr3,chr3,chr3,chr3	+,+,+,-	ARMC8,ARMC8,ARMC8,DBR1	-7408,-7408,-7408,-19708
chr3:196045849-196046814	chr3	+	196045983	196046694	True	NM_152672,NM_152773	chr3,chr3	+,-	OSTalpha,TCTEX1D2	-102651,-818
chr22:23977600-23978793	chr22	+	23977867	23978515	True	NM_153615,NM_016449	chr22,chr22	+,-	RGL4,C22orf43	54532,-3359
chr7:73245706-73245913	chr7	+	73245836	73245962	True	NM_001305,NM_152559	chr7,chr7	+,-	CLDN4,WBSCR27	-694,10943
chr1:201915441-201915677	chr1	+	201915441	201915659	True	NM_006335,NM_012134	chr1,chr1	+,-	TIMM17A,LMOD1	8959,107
chr11:102595298-102597198	chr11	+	102595306	102597244	True	NM_001166,NM_002424	chr11,chr11	+,-	BIRC2,MMP8	-377391,-31
chr5:96211780-96212837	chr5	+	96211827	96212576	True	NM_001198541,NM_001130140,NM_022350	chr5,chr5,chr5	-,+,+	ERAP1,ERAP2,ERAP2	-61979,-234,-234
chr17:37026196-37026459	chr17	+	37026199	37026507	True	NM_000978,NM_006148	chr17,chr17	-,+	RPL23,LASP1	-16146,-138
chr2:60960686-60961626	chr3	-	141644902	141644970	False	NM_001679,NM_001178140	chr3,chr3	+,-	ATP1B3,TFDP2	-49489,74313
chr2:60960686-60961626	chr2	+	60961361	60961666	True	NM_022894,NR_033980	chr2,chr2	+,-	PAPOLG,FLJ16341	21698,146839
chr2:128786244-128787273	chr2	+	128786300	128786928	True	NM_024545,NM_020120,NM_001145928	chr2,chr2,chr2	-,+,-	SAP130,UGGT1,SAP130	-1431,61825,-1431
chr13:73673010-73673288	chr13	+	73673166	73673306	True	NM_001730,NM_014953	chr13,chr13	+,-	KLF5,DIS3	-40077,-316822
chr6:32630854-32631147	chr6	+	32630890	32631152	True	NM_002122,NM_002123	chr6,chr6	+,-	HLA-DQA1,HLA-DQB1	-25758,3366
chr11:826236-826808	chr11	+	826336	826856	True	NM_001039490,NM_021128,NM_173584,NM_020376,NM_139030,NM_004357,NM_139029	chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,-,+,+,+,+,+	CD151,POLR2L,EFCAB4A,PNPLA2,CD151,CD151,CD151	6095,15725,728,-7486,6095,6095,6095
chr9:131533457-131533841	chr9	+	131533461	131533735	True	NM_006336,NM_018201	chr9,chr9	-,+	ZER1,TBC1D13	513,15774
chr1:153631996-153632792	chr1	+	153631997	153632229	True	NM_012437,NM_004515	chr1,chr1	+,-	SNAPIN,ILF2	-903,11310
chr12:47218523-47219745	chr12	+	47218556	47219692	True	NM_138371,NM_018018,NM_001143824	chr12,chr12,chr12	+,-,-	FAM113B,SLC38A4,SLC38A4	390359,138,138
chr4:25378583-25378792	chr4	+	25378630	25378804	True	NM_013367,NM_016955	chr4,chr4	+,-	ANAPC4,SEPSECS	43,-216426
chr5:159624845-159625588	chr5	+	159624888	159625618	True	NM_001130864,NM_001040442	chr5,chr5	-,+	PWWP2A,FABP6	-78436,429
chr17:74235633-74235856	chr17	+	74235649	74235801	True	NM_052916,NM_182565	chr17,chr17	-,+	RNF157,FAM100B	639,25484
chr4:145567336-145568079	chr4	+	145567422	145567862	True	NR_037595,NM_022475	chr4,chr4	-,+	LOC646576,HHIP	-251,-325
chr5:145242710-145243343	chr5	+	145242832	145243390	True	NM_152550,NM_001080516	chr5,chr5	+,-	SH3RF2,GRXCR2	72735,9191
chr10:1034764-1035286	chr10	+	1034806	1035058	True	NM_033261,NM_012341	chr10,chr10	-,+	IDI2,GTPBP4	36799,-508
chr9:130532877-130533527	chr9	+	130532960	130533336	True	NM_001142532,NR_036055,NM_001142531,NM_005489,NM_170600	chr9,chr9,chr9,chr9,chr9	-,+,-,-,-	SH2D3C,MIR2861,SH2D3C,SH2D3C,SH2D3C	-8263,14860,-8241,335,7762
chr9:131105536-131106025	chr9	+	131105535	131106067	True	NM_015679,NM_005094	chr9,chr9	-,+	TRUB2,SLC27A4	-20838,-2747
chr6:7591065-7592071	chr6	+	7591284	7592123	True	NM_152551,NM_001170693	chr6,chr6	+,-	SNRNP48,CAGE1	-903,-201342
chr19:47838951-47839437	chr19	+	47839059	47839225	True	NM_001009813,NM_018485	chr19,chr19	-,+	MEIS3,GPR77	83612,1145
chrX:102767538-102768022	chrX	+	102767874	102767973	True	NM_001006935,NM_080879	chrX,chrX	+,-	TCEAL4,RAB40A	72445,6501
chr11:68671555-68671866	chr11	+	68671656	68671864	True	NM_181515,NM_181514,NM_002180	chr11,chr11,chr11	-,-,+	MRPL21,MRPL21,IGHMBP2	-353,-353,-388
chr7:17033351-17034772	chr7	+	17033508	17034787	True	NM_176813,NM_014399	chr7,chr7	-,+	AGR3,TSPAN13	-111895,-240209
chr6:112937737-112938992	chr6	+	112937981	112938963	True	NM_001105209,NM_001013734	chr6,chr6	-,+	LAMA4,RFPL4B	-362153,-269500
chr11:124487336-124488826	chr11	+	124487573	124488452	True	NM_032811,NR_016021,NM_052959,NM_170601	chr11,chr11,chr11,chr11	+,+,+,-	TBRG1,TBRG1,PANX3,SIAE	4289,4289,-6171,55376
chr3:47423147-47423902	chr3	+	47423191	47423605	True	NM_012235,NM_015466	chr3,chr3	-,+	SCAP,PTPN23	93890,-751
chr16:20419996-20420450	chr16	+	20420149	20420281	True	NM_174924,NM_017888	chr16,chr16	-,+	PDILT,ACSM5	-4116,574
chr2:73440826-73441315	chr2	+	73441118	73441282	True	NM_006062,NM_032319	chr2,chr2	+,-	SMYD5,C2orf7	83,19124
chr15:59907111-59907357	chr15	+	59907140	59907341	True	NM_004751,NM_004492	chr15,chr15	+,-	GCNT3,GTF2A2	-3216,42447
chrX:100602536-100603326	chrX	+	100602646	100603336	True	NM_001145951,NM_021029,NM_004085	chrX,chrX,chrX	-,+,-	TIMM8A,RPL36A,TIMM8A	422,42541,671
chr1:19992489-19992925	chr1	+	19992544	19992966	True	NM_181719,NM_000871	chr1,chr1	-,+	TMCO4,HTR6	133494,-815
chr17:27717984-27718211	chr17	+	27718011	27718242	True	NM_025142,NM_020791,NM_020772	chr17,chr17,chr17	+,+,-	TAOK1,TAOK1,NUFIP2	-119,-119,-96845
chr5:1524523-1524878	chr5	+	1524549	1524919	True	NM_024830,NM_004553	chr5,chr5	-,+	LPCAT1,NDUFS6	-473,276576
chr17:57297048-57297755	chr17	+	57297080	57297725	True	NM_182569,NM_182620,NM_001165994,NM_001165993,NM_018149	chr17,chr17,chr17,chr17,chr17	+,-,+,+,+	GDPD1,SKA2,GDPD1,GDPD1,C17orf71	102,-64280,102,102,-9760
chr22:50451460-50451714	chr22	+	50451460	50451654	True	NM_001001694,NM_001164104	chr22,chr22	-,+	IL17REL,MOV10L1	-405,76780
chr19:55285293-55286698	chr19	+	55285611	55286609	True	NM_014218,NM_001127255	chr19,chr19	+,-	KIR2DL1,NLRP7	-4398,172314
chr15:37181577-37182343	chr15	+	37181716	37182380	True	NR_024264,NM_032499	chr15,chr15	-,+	LOC145845,C15orf41	-2982,-248968
chr2:202317729-202318287	chr2	+	202317782	202318219	True	NM_015049,NM_018571	chr2,chr2	-,+	TRAK2,STRADB	-1463,-1454
chr1:25666720-25667839	chr1	+	25666974	25667432	True	NM_020485,NM_014313	chr1,chr1	-,+	RHCE,TMEM50A	79994,-2237
chr4:56415188-56417149	chr4	+	56415389	56417114	True	NM_004898,NM_018475	chr4,chr4	-,+	CLOCK,TMEM165	-2392,-153351
chr1:24720657-24722013	chr1	+	24720700	24721846	True	NM_020448,NM_001199013	chr1,chr1	+,-	NIPAL3,C1orf201	20398,18473
chr6:24358296-24358725	chr6	+	24358380	24358566	True	NM_016356,NM_181337	chr6,chr6	-,+	DCDC2,KAAG1	-100,-1307
chr20:62585445-62585768	chr20	+	62585451	62585781	True	NM_017859,NM_001193379,NR_027287	chr20,chr20,chr20	-,-,+	UCKL1,UCKL1,UCKL1-AS1	2069,-2924,-765
chr19:41815595-41815867	chr19	+	41815652	41815871	True	NM_052848,NM_000660	chr19,chr19	+,-	CCDC97,TGFB1	222,44010
chr16:82205078-82205293	chr16	+	82205077	82205293	True	NM_005792,NM_002153	chr16,chr16	-,+	MPHOSPH6,HSD17B2	-1248,-136272
chr14:93529499-93530348	chr14	+	93529529	93530317	True	NM_001142594,NR_002808	chr14,chr14	-,+	ITPK1,ITPK1-AS1	51996,3479
chr16:67219071-67219463	chr16	+	67219109	67219427	True	NM_001950,NM_178516,NM_001040715	chr16,chr16,chr16	+,-,-	E2F4,EXOC3L1,KIAA0895L	6640,4730,-1226
chr3:172858643-172858967	chr3	+	172858661	172859003	True	NM_014932,NM_031955	chr3,chr3	+,-	NLGN1,SPATA16	257240,105
chrX:150392340-150393145	chrX	+	150392381	150393053	True	NM_134446,NM_004224	chrX,chrX	-,+	CD99L2,GPR50	-325092,-47387
chr1:22970675-22971538	chr1	+	22970919	22971427	True	NR_036214,NM_172369,NM_015991,NM_001114101,NM_000491	chr1,chr1,chr1,chr1,chr1	-,+,+,+,+	MIR4253,C1QC,C1QA,C1QC,C1QB	218342,-852,-7852,-852,8254
chr10:112055206-112056086	chr10	+	112055322	112056144	True	NM_005962,NM_005871	chr10,chr10	+,-	MXI1,SMNDC1	-69618,8622
chr3:191035662-191036417	chr3	+	191035727	191036213	True	NM_198152,NM_174908	chr3,chr3	-,+	UTS2D,CCDC50	12168,10660
chr15:24921509-24921750	chr15	+	24921552	24921796	True	NM_018958,NR_026647	chr15,chr15	+,-	C15orf2,PWRN2	-1062,-506499
chr1:205051146-205053094	chr1	+	205051252	205053010	True	NM_203376,NM_005076	chr1,chr1	-,+	TMEM81,CNTN2	629,-38976
chr15:38990902-38991781	chr15	+	38990912	38991466	True	NM_005739,NM_207444	chr15,chr15	-,+	RASGRP1,C15orf53	-133905,-2164
chr22:39490237-39490610	chr22	+	39490451	39490538	True	NM_001166004,NM_181773,NM_175709,NM_001166002,NM_001166003	chr22,chr22,chr22,chr22,chr22	+,+,-,+,+	APOBEC3H,APOBEC3H,CBX7,APOBEC3H,APOBEC3H	2690,2690,58053,2690,2690
chr2:171568858-171569105	chr2	+	171568867	171569151	True	NM_001003845,NR_027433	chr2,chr2	+,-	SP5,LOC440925	2705,1976
chr22:38578716-38579219	chr22	+	38578805	38579207	True	NM_003560,NM_001004426,NM_001161572,NM_001199562	chr22,chr22,chr22,chr22	-,-,+,-	PLA2G6,PLA2G6,MAFF,PLA2G6	-1044,-1044,18731,-969
chr1:157735407-157736115	chr1	+	157735518	157735882	True	NM_030764,NM_018240	chr1,chr1	-,+	FCRL2,KIRREL	11090,227180
chr10:89294113-89294421	chr10	+	89294152	89294410	True	NM_001178118,NR_024397	chr10,chr10	+,-	MINPP1,LOC728190	-26627,-191837
chr11:33916526-33916868	chr11	+	33916525	33916647	True	NM_203364,NM_005574	chr11,chr11	+,-	CAPRIN1,LMO2	156582,-2689
chr11:86747598-86748498	chr11	+	86747657	86748481	True	NR_033149,NM_012193,NM_022918,NM_001168724	chr11,chr11,chr11,chr11	+,-,+,+	TMEM135,FZD4,TMEM135,TMEM135	404,-81224,404,404
chr1:48459362-48459680	chr1	+	48459376	48459680	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	2932,228676
chr12:49086869-49088005	chr12	+	49086900	49087962	True	NR_024266,NR_029448	chr12,chr12	-,+	LOC144438,LOC255411	-671,33255
chr1:92547289-92547915	chr1	+	92547444	92547948	True	NM_001195684,NM_183242	chr1,chr1	-,+	TGFBR3,BTBD8	-175885,-1642
chr3:187009177-187009439	chr3	+	187009177	187009375	True	NM_001879,NM_139125,NR_033519,NM_022147,NM_001031849	chr3,chr3,chr3,chr3,chr3	-,-,-,+,-	MASP1,MASP1,MASP1,RTP4,MASP1	485,485,485,76792,485
chr5:102197756-102198046	chr5	+	102197981	102198085	True	NM_138821,NM_138822,NM_001177306,NR_033440,NM_017676,NM_138766,NM_000919	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,-,+,+	PAM,PAM,PAM,PAM,GIN1,PAM,PAM	3441,3441,3441,3441,257809,3441,3441
chr12:93395354-93395845	chr12	+	93395383	93395689	True	NM_001004330,NM_003566	chr12,chr12	+,-	PLEKHG7,EEA1	-265170,-72276
chr1:234745789-234746039	chr1	+	234745894	234745966	True	NR_033927,NM_001077397,NM_182972	chr1,chr1,chr1	+,-,-	NCRNA00184,IRF2BP2,IRF2BP2	19090,-623,-623
chr20:18268094-18268409	chr20	+	18268141	18268437	True	NM_003434,NM_001083330,NM_001099407	chr20,chr20,chr20	+,+,-	ZNF133,ZNF133,C20orf12	683,683,179442
chr5:61708952-61710658	chr5	+	61709107	61710658	True	NM_014473,NM_016338,NM_001134779	chr5,chr5,chr5	-,+,+	DIMT1L,IPO11,IPO11	-9379,-585,4052
chr4:1168565-1169018	chr4	+	1168570	1168960	True	NR_033339,NM_012445,NM_001128325	chr4,chr4,chr4	+,-,-	C4orf42,SPON2,SPON2	74267,-1913,-1571
chr15:74175181-74175558	chr15	+	74175206	74175448	True	NM_004809,NM_153356	chr15,chr15	-,+	STOML1,TBC1D21	109237,-9289
chr1:84978940-84979821	chr1	+	84979156	84979881	True	NR_036561,NM_005274	chr1,chr1	+,-	SPATA1,GNG5	-7246,-6894
chr16:81250005-81251370	chr16	+	81250015	81251175	True	NM_017429,NM_052892,NM_001076780	chr16,chr16,chr16	+,-,-	BCMO1,PKD1L2,PKD1L2	21120,2859,2859
chr17:46670992-46671410	chr17	+	46671059	46671330	True	NR_033204,NR_033205,NR_033202,NR_033203,NR_033201,NM_002147	chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,-	LOC404266,LOC404266,LOC404266,LOC404266,LOC404266,HOXB5	-1428,1989,-3268,-1456,-3287,-14
chr1:104090718-104092676	chr1	+	104091451	104092479	True	NM_020978,NM_001008218	chr1,chr1	+,-	AMY2B,AMY1B	4842,146466
chr5:140176235-140177528	chr5	+	140176424	140177367	True	NM_002109,NM_031495,NM_031500,NM_031497,NM_018907,NM_018906,NM_018905	chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,+,+,+,+,+,+	HARS,PCDHA2,PCDHA4,PCDHA3,PCDHA4,PCDHA3,PCDHA2	-105453,-2031,9304,3415,9304,3415,-2031
chr1:205538162-205538464	chr1	+	205538167	205538301	True	NM_181644,NR_027086	chr1,chr1	+,-	MFSD4,LOC284578	-106,-12404
chr1:45450771-45451734	chr1	+	45450815	45451769	True	NM_000374,NM_020365,NM_001166588	chr1,chr1,chr1	+,-,-	UROD,EIF2B3,EIF2B3	26035,642,642
chr7:56559084-56559455	chr7	+	56559135	56559434	True	NR_029420,NR_026929	chr7,chr7	-,+	LOC650226,DKFZp434L192	-43067,4481
chr21:46495452-46496187	chr21	+	46495579	46496187	True	NM_001112,NM_001160230,NR_027292,NM_015834,NR_027674,NR_027672,NR_027673,NM_015833	chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21	+,+,-,+,+,+,+,+	ADARB1,ADARB1,C21orf122,ADARB1,ADARB1,ADARB1,ADARB1,ADARB1	-1137,-1137,-2453,-1137,-1137,-1137,-1137,-1137
chr10:6372249-6372503	chr10	+	6372251	6372427	True	NM_004566,NM_006257	chr10,chr10	+,-	PFKFB3,PRKCQ	-127462,249861
chr9:95709961-95710286	chr9	+	95710009	95710335	True	NM_001083536,NM_031486	chr9,chr9	+,-	FGD3,ZNF484	-459,-69719
chr3:119180913-119181432	chr3	+	119180955	119181456	True	NM_018266,NM_152305,NR_024265	chr3,chr3,chr3	-,+,+	TMEM39A,POGLUT1,POGLUT1	1072,6328,6328
chr1:149983072-149983643	chr1	+	149983072	149983545	True	NM_007259,NM_020205	chr1,chr1	+,-	VPS45,OTUD7B	55796,-386
chr12:14720154-14720373	chr12	+	14720234	14720330	True	NM_024829,NM_018179	chr12,chr12	-,+	PLBD1,ATF7IP	511,-201674
chr2:207328446-207329153	chr2	+	207328468	207328996	True	NM_005279,NM_003812	chr2,chr2	-,+	GPR1,ADAM23	-245697,-20151
chr19:53073418-53073628	chr19	+	53073511	53073613	True	NM_001172655,NM_018260,NM_001105549	chr19,chr19,chr19	+,+,-	ZNF701,ZNF701,ZNF83	303,-36,68081
chr16:56993648-56994590	chr16	+	56993912	56994608	True	NM_000078,NM_024946	chr16,chr16	+,-	CETP,FAM192A	1226,225418
chr9:65633791-65634166	chr9	+	65633790	65634132	True	NR_024496,NM_015667	chr9,chr9	+,-	LOC442421,FAM75A7	860136,-124180
chr9:65633791-65634166	chr9	+	43892192	43892534	False	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	-261462,-207358
chr9:65633791-65634166	chr9	-	39101665	39102007	False	NM_033655,NM_001085452	chr9,chr9	-,+	CNTNAP3,FAM75A1	186343,253691
chr9:65633791-65634166	chr9	+	40309247	40309589	False	NM_001083124,NM_033160	chr9,chr9	+,-	FAM75A3,ZNF658	390701,482573
chr1:154182221-154183114	chr1	+	154182470	154182858	True	NM_001010979,NM_001127320	chr1,chr1	-,+	C1orf189,UBAP2L	-3661,9796
chr12:104694355-104695274	chr12	+	104694388	104695104	True	NM_006166,NM_001008394	chr12,chr12	-,+	NFYB,EID3	-162348,2444
chr1:48233813-48234079	chr1	+	48233844	48234072	True	NM_001194986,NM_004474	chr1,chr1	-,+	LOC388630,FOXD2	228540,-332206
chr12:122327417-122328034	chr12	+	122327416	122327823	True	NM_001171993,NM_002813	chr12,chr12	-,+	HPD,PSMD9	-899,-831
chr7:86849867-86850595	chr7	+	86850036	86850622	True	NM_024315,NM_021145	chr7,chr7	-,+	C7orf23,DMTF1	-1005,-68217
chr13:110437948-110438239	chr13	+	110438007	110438195	True	NM_003749,NM_001846	chr13,chr13	-,+	IRS2,COL4A2	769,521435
chr17:47309673-47310290	chr17	+	47309796	47309880	True	NM_001143804,NM_178500,NR_034161	chr17,chr17,chr17	-,-,+	PHOSPHO1,PHOSPHO1,FLJ40194	-1668,-1668,15724
chrX:47700200-47700655	chrX	+	47700425	47700678	True	NM_007137,NM_001007088	chrX,chrX	+,-	ZNF81,ZNF182	-4175,162756
chr1:6321813-6322245	chr1	+	6321906	6322246	True	NM_207370,NM_001024598	chr1,chr1	-,+	GPR153,HES3	-871,-17705
chr7:122518548-122519009	chr7	+	122518866	122519036	True	NM_001009571,NM_001167940,NR_036484,NM_017954	chr7,chr7,chr7,chr7	-,-,+,-	CADPS2,CADPS2,LOC154860,CADPS2	7827,7827,-575214,7827
chr3:125586488-125587057	chr3	+	125586941	125586999	True	NM_001015050,NR_024250	chr3,chr3	-,+	ALG1L,LOC100125556	68938,48444
chr19:44079014-44079377	chr19	+	44079091	44079419	True	NM_001193621,NM_001193622,NM_006297	chr19,chr19,chr19	+,+,-	LOC390940,LOC390940,XRCC1	1532,5276,361
chr4:6711402-6711641	chr4	+	6711441	6711631	True	NM_203462,NM_018366	chr4,chr4	-,+	MRFAP1L1,CNO	25,6210
chr15:67835238-67835440	chr15	+	67835343	67835445	True	NM_002757,NM_145160,NM_024666	chr15,chr15,chr15	+,+,-	MAP2K5,MAP2K5,AAGAB	-373,-373,-288269
chr14:55369901-55370241	chr14	+	55369947	55370230	True	NM_001024070,NM_001024071,NM_001024024,NM_000161,NM_080867	chr14,chr14,chr14,chr14,chr14	-,-,-,-,+	GCH1,GCH1,GCH1,GCH1,SOCS4	-405,-405,-405,-405,123613
chr6:46702899-46703181	chr6	+	46702956	46703044	True	NM_001162435,NM_001168357,NM_005084	chr6,chr6,chr6	+,-,-	LOC100287718,PLA2G7,PLA2G7	11609,436,157
chr3:38493867-38495031	chr3	+	38494261	38494977	True	NM_001106,NR_028389	chr3,chr3	+,-	ACVR2B,LOC100128640	812,1384
chr4:190946910-190947865	chr10	+	135439070	135439452	False	NM_001127386	chr10	+	DUX4L2	40915
chr4:190946910-190947865	chr4	+	190946983	190947565	True	NM_012147,NM_001005217	chr4,chr4	+,-	DUX2,FRG2	41301,897
chr1:110523134-110524618	chr1	+	110523174	110524462	True	NM_006621,NM_006492	chr1,chr1	+,-	AHCYL1,ALX3	2845,88910
chr9:107692273-107692951	chr9	+	107692362	107692756	True	NR_024011,NM_005502	chr9,chr9	+,-	LOC286367,ABCA1	-155780,-1835
chr5:74063086-74063624	chr5	+	74063111	74063651	True	NM_014886,NM_032380,NM_170681,NM_170691	chr5,chr5,chr5,chr5	+,-,-,-	NSA2,GFM2,GFM2,GFM2	-59,-69,-69,-69
chr14:74178184-74179407	chr14	+	74178578	74179220	True	NM_031427,NM_006029	chr14,chr14	+,-	DNAL1,PNMA1	-67058,1958
chr4:57775281-57775696	chr4	+	57775315	57775693	True	NM_032313,NM_001193508,NM_005612	chr4,chr4,chr4	-,+,+	C4orf14,REST,REST	68185,-287,-1324
chr7:39057265-39057575	chr7	+	39057272	39057625	True	NM_007252,NM_080631	chr7,chr7	+,-	POU6F2,VPS41	-39714,-108472
chr4:71575766-71576309	chr4	+	71575766	71576119	True	NM_144646,NM_001130709	chr4,chr4	-,+	IGJ,RUFY3	-43418,-5163
chr17:55159296-55159721	chr17	+	55159368	55159467	True	NM_004645,NM_003488	chr17,chr17	-,+	COIL,AKAP1	-120957,3085
chr4:139100944-139102378	chr4	+	139101035	139102398	True	NR_037866,NM_012118	chr4,chr4	-,+	LOC641365,CCRN4L	-49196,834544
chr14:68065018-68066657	chr14	+	68065297	68066598	True	NM_001172,NM_004569	chr14,chr14	+,-	ARG2,PIGH	19980,469
chr17:1533568-1534677	chr17	+	1533585	1534261	True	NM_001163673,NM_152346	chr17,chr17	+,-	WDR81,SLC43A2	85555,-1455
chr2:46525936-46526147	chr2	+	46525943	46526179	True	NM_001430,NM_080653	chr2,chr2	+,-	EPAS1,ATP6V1E2	-1453,220967
chr1:55274283-55275872	chr1	+	55274305	55275711	True	NM_017904,NM_001114108,NM_152607,NM_001110533	chr1,chr1,chr1,chr1	-,-,+,+	TTC22,TTC22,C1orf177,C1orf177	-7364,-7364,-2621,-2621
chr19:36431028-36431260	chr19	+	36431083	36431241	True	NR_033390,NM_024509	chr19,chr19	-,+	TYROBP,LRFN3	-31872,-3112
chr6:14709070-14710403	chr6	+	14709438	14710448	True	NM_001031713,NM_004973	chr6,chr6	-,+	CCDC90A,JARID2	-894649,536078
chr2:131509388-131511121	chr2	+	131509721	131510980	True	NM_152698,NM_001079530,NM_001105195,NM_001105193,NM_001105194	chr2,chr2,chr2,chr2,chr2	+,-,+,+,+	FAM123C,CFC1B,FAM123C,FAM123C,FAM123C	2096,-152470,2883,2243,2883
chr3:9922982-9923817	chr3	+	9923206	9923757	True	NM_032492,NM_022094,NM_001199551,NM_001199552,NM_001199623	chr3,chr3,chr3,chr3,chr3	+,-,-,-,-	JAGN1,CIDEC,CIDEC,CIDEC,CIDEC	8513,-2466,-1268,-1268,-2710
chrX:119006776-119008216	chrX	+	119006937	119008131	True	NM_006978,NM_004541	chrX,chrX	-,+	RNF113A,NDUFA1	-1146,-1263
chr11:64109272-64109897	chr11	+	64109319	64109864	True	NM_032251,NM_016404	chr11,chr11	+,-	CCDC88B,TRMT112	-1680,-24286
chr17:79608965-79609270	chr17	+	79609015	79609293	True	NM_017921,NM_031945	chr17,chr17	-,+	NPLOC4,TSPAN10	-4877,55
chr14:20402988-20404235	chr14	+	20403176	20404244	True	NM_001004712,NM_001004063	chr14,chr14	-,+	OR4K14,OR4K1	79158,119
chr7:31094859-31096269	chr7	+	31094973	31096095	True	NM_022728,NM_001199635,NM_001199637,NM_001118,NM_001199636	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	NEUROD6,ADCYAP1R1,ADCYAP1R1,ADCYAP1R1,ADCYAP1R1	284493,-2948,-2948,-2948,-2948
chr1:231474406-231475309	chr1	+	231474546	231475112	True	NM_032018,NM_175876,NM_001010984	chr1,chr1,chr1	+,-,+	C1orf124,EXOC8,C1orf124	-915,-968,-915
chr10:45871024-45871698	chr10	+	45871099	45871619	True	NM_001004297,NM_000698	chr10,chr10	-,+	OR13A1,ALOX5	-60043,-1522
chr3:149531167-149531386	chr3	+	149531246	149531424	True	NM_007282,NM_001144960,NM_183381	chr3,chr3,chr3	+,-,+	RNF13,C3orf16,RNF13	-822,-20636,-822
chr3:52528679-52529130	chr3	+	52528686	52529130	True	NM_015136,NM_001134231	chr3,chr3	+,-	STAB1,NT5DC2	225,38713
chr12:133405838-133406642	chr12	+	133405854	133406426	True	NM_001172557,NM_005895,NM_001170544	chr12,chr12,chr12	-,-,+	GOLGA3,GOLGA3,PGAM5	-428,-566,-118512
chr13:28366604-28366819	chr13	+	28366647	28366785	True	NM_153371,NM_145657	chr13,chr13	-,+	LNX2,GSX1	-171927,2
chrX:154113749-154113990	chrX	+	154113784	154114006	True	NR_036049,NM_001007524,NM_001007523,NM_012151,NM_080720,NR_036260,NM_019863,NR_036259,NM_001017990	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,-,-,-,+	MIR1184-1,F8A3,F8A2,F8A1,H2AFB3,MIR1184-3,F8,MIR1184-2,H2AFB1	1777,643,643,628,-526,1777,621,1777,-526
chrX:154113749-154113990	chrX	+	154610895	154610975	False	NR_036049,NM_001007524,NM_001007523,NM_012151,NM_080720,NR_036260,NR_036259,NM_001017991,NM_001017990	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,-,-,+,+	MIR1184-1,F8A3,F8A2,F8A1,H2AFB3,MIR1184-3,MIR1184-2,H2AFB2,H2AFB1	1922,788,788,773,-526,1922,1922,-518,-526
chrX:154113749-154113990	chrX	-	154689048	154689128	False	NR_036049,NM_001007524,NM_001007523,NM_012151,NM_080720,NR_036260,NR_036259,NM_001017991,NM_001017990	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,-,-,-,-,+,+,-,-	MIR1184-1,F8A3,F8A2,F8A1,H2AFB3,MIR1184-3,MIR1184-2,H2AFB2,H2AFB1	-1921,-787,-787,-772,526,-1921,-1921,518,526
chr1:154954787-154955618	chr1	+	154954902	154955594	True	NM_025207,NM_001202859,NM_001826,NR_036212,NM_001184892,NM_001184891,NR_024163,NM_001130041,NM_201398,NM_003029	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,-,+,+,+,+,+,-,+,-	FLAD1,SHC1,CKS1B,MIR4258,FLAD1,FLAD1,CKS1B,SHC1,FLAD1,SHC1	175,-7943,-7836,-6785,175,175,-7836,-7943,175,-7943
chr1:16766632-16767073	chr1	+	16766666	16767116	True	NM_018090,NM_198546,NM_001145277,NM_001145278	chr1,chr1,chr1,chr1	+,-,+,+	NECAP2,SPATA21,NECAP2,NECAP2	50,-2747,50,50
chr6:31372051-31372438	chr6_qbl_hap6	+	2665623	2665697	False	NM_001177519,NM_000247,NR_036523,NR_036524,NM_005514	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	+,+,+,+,-	MICA,MICA,MICA,MICA,HLA-B	-857,-857,-4667,-3755,-47118
chr6:31372051-31372438	chr6	+	31372177	31372251	True	NM_001177519,NM_000247,NR_036523,NR_036524,NM_005514	chr6,chr6,chr6,chr6,chr6	+,+,+,+,-	MICA,MICA,MICA,MICA,HLA-B	-857,-857,-4667,-3755,-47188
chr6:31372051-31372438	chr6_mann_hap4	+	2718611	2718685	False	NM_001177519,NM_000247,NR_036523,NR_036524,NM_005514	chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4	+,+,+,+,-	MICA,MICA,MICA,MICA,HLA-B	-857,-857,-4665,-3753,-47167
chr6:31372051-31372438	chr6_ssto_hap7	+	2705974	2706048	False	NM_001177519,NM_000247,NR_036523,NR_036524,NM_005514	chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7	+,+,+,+,-	MICA,MICA,MICA,MICA,HLA-B	-857,-857,-4666,-3754,-47226
chr6:31372051-31372438	chr6_cox_hap2	+	2884876	2884950	False	NM_001177519,NM_000247,NR_036523,NR_036524,NM_005514	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,+,+,+,-	MICA,MICA,MICA,MICA,HLA-B	-857,-857,-4670,-3758,-47199
chr10:49804211-49804505	chr10	+	49804221	49804369	True	NM_020945,NM_021226	chr10,chr10	+,-	WDFY4,ARHGAP22	89148,8819
chr3:36928257-36929474	chr3	+	36928298	36929296	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	57310,105544
chr18:14377756-14378577	chr18	+	14377924	14378600	True	NR_024076,NR_026756	chr18,chr18	-,+	CXADRP3,LOC284233	120155,-40559
chr4:41984542-41984933	chr4	+	41984640	41984924	True	NM_006345,NM_001159547,NM_001029955	chr4,chr4,chr4	+,-,+	SLC30A9,BEND4,DCAF4L1	7598,170021,-978
chr21:43529795-43530143	chr21	+	43529869	43530147	True	NM_173568,NR_027243	chr21,chr21	+,-	UMODL1,C21orf128	-38494,-1225
chr4:85884120-85884500	chr4	+	85884119	85884248	True	NM_014991,NR_015359	chr4,chr4	-,+	WDFY3,NCRNA00247	3357,3722
chr14:94574970-94575445	chr14	+	94575022	94575381	True	NM_032036,NM_001130080,NM_005532	chr14,chr14,chr14	-,+,+	IFI27L2,IFI27,IFI27	20626,1697,1697
chr8:66577260-66578935	chr8	+	66577456	66578978	True	NM_018120,NM_001145838	chr8,chr8	-,+	ARMC1,MTFR1	-31004,3129
chr17:54891878-54892251	chr17	+	54891961	54892297	True	NM_001085430,NM_003647	chr17,chr17	-,+	C17orf67,DGKE	1003,19162
chr5:33952389-33952744	chr5	+	33952406	33952782	True	NM_016568,NM_016180	chr5,chr5	+,-	RXFP3,SLC45A2	-15966,32054
chr22:24990850-24991477	chr22	+	24990895	24991387	True	NM_005265,NM_207644,NM_001032364	chr22,chr22,chr22	+,-,+	GGT1,C22orf36,GGT1	7792,-1860,7736
chr3:53533411-53534138	chr3	+	53533512	53534139	True	NM_001128840,NM_001128839,NM_000720,NM_018403	chr3,chr3,chr3,chr3	+,+,+,-	CACNA1D,CACNA1D,CACNA1D,DCP1A	-4539,-4539,-4539,-151858
chr1:65884061-65885675	chr1	+	65884113	65885577	True	NM_001198683,NM_001198681,NM_017526,NR_029516,NM_001003680,NM_001003679,NM_002303	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,-,+,+,+	LEPROT,LEPROT,LEPROT,MIR101-1,LEPR,LEPR,LEPR	553,821,553,-359922,757,757,757
chr1:212781440-212781648	chr1	+	212781440	212781630	True	NM_001674,NM_018664,NM_001040619	chr1,chr1,chr1	+,-,+	ATF3,BATF3,ATF3	363,91747,363
chr19:9239875-9240251	chr19	+	9239911	9240071	True	NM_001190791,NM_001001958	chr19,chr19	+,-	ZNF317,OR7G3	10984,-2285
chr7:142758503-142759655	chr7	+	142758532	142759656	True	NR_002140,NM_001001667	chr7,chr7	-,+	OR6W1P,OR6V1	1276,-9145
chr9:84677934-84678134	chr9	+	84677964	84678176	True	NM_005077,NM_001001670	chr9,chr9	-,+	TLE1,FAM75D1	-374368,-74328
chr6:15080215-15080465	chr6	+	15080222	15080344	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	166182,582995
chr4:146650746-146651492	chr4	+	146650798	146651444	True	NM_001080531,NM_178835	chr4,chr4	+,-	C4orf51,ZNF827	-49501,208221
chr9:124062926-124064837	chr9	+	124063186	124064755	True	NM_004099,NM_000177	chr9,chr9	-,+	STOM,GSN	67840,-1158
chr19:22608926-22610167	chr19	+	22609343	22610213	True	NR_033899,NM_001098626	chr19,chr19	+,-	LOC440518,ZNF98	168845,-4195
chr3:184456212-184456422	chr3	+	184456220	184456467	True	NM_001009921,NM_022149	chr3,chr3	+,-	VPS8,MAGEF1	73463,-26384
chr21:33033968-33034472	chr21	+	33034083	33034485	True	NM_000454,NM_001145444	chr21,chr21	+,-	SOD1,SCAF4	-2199,69996
chr9:86979194-86979903	chr9	+	86979595	86979669	True	NM_022127,NM_001018064	chr9,chr9	-,+	SLC28A3,NTRK2	3806,303796
chr3:51534178-51534645	chr3	+	51534226	51534485	True	NM_001171904,NM_014703,NM_015106	chr3,chr3,chr3	-,-,+	VPRBP,VPRBP,RAD54L2	-208,-208,41110
chr12:104606294-104607067	chr12	+	104606432	104607072	True	NM_006166,NM_001093771	chr12,chr12	-,+	NFYB,TXNRD1	-74392,2486
chr1:164854256-164855326	chr1	+	164854438	164855336	True	NM_001174069,NM_002585	chr1,chr1	-,+	LMX1A,PBX1	470192,-325892
chr7:142982716-142983217	chr7	+	142982841	142983231	True	NM_032983,NM_032982,NM_153345,NM_014690	chr7,chr7,chr7,chr7	+,+,+,-	CASP2,CASP2,TMEM139,FAM131B	2076,2076,-829,75992
chr3:187926407-187928180	chr3	+	187926428	187928156	True	NM_005578,NR_036497	chr3,chr3	+,-	LPP,LOC339929	2564,-54552
chr22:41843311-41843645	chr22	+	41843319	41843603	True	NM_001098,NM_016272	chr22,chr22	+,-	ACO2,TOB2	21525,-292
chr11:65264117-65264488	chr11	+	65264178	65264490	True	NR_002819,NM_001130144	chr11,chr11	+,-	MALAT1,LTBP3	742,61259
chr15:35045693-35046470	chr15	+	35045791	35046501	True	NM_175741,NM_020660	chr15,chr15	+,-	C15orf55,GJD2	-407783,238
chrX:37545223-37545579	chrX	+	37545233	37545427	True	NM_021083,NM_006520	chrX,chrX	+,-	XK,DYNLT3	-151,161512
chr14:95077252-95077687	chr14	+	95077618	95077714	True	NM_001085,NM_173850	chr14,chr14	+,-	SERPINA3,SERPINA12	999,-93437
chr14:30396035-30396333	chr14	+	30396050	30396308	True	NM_017769,NM_002742	chr14,chr14	+,-	G2E3,PRKD1	632020,641
chr9:123556281-123558178	chr9	+	123556567	123558011	True	NR_027442,NM_012164	chr9,chr9	+,-	LOC100288842,FBXW2	-849,-827
chrX:53079113-53079560	chrX	+	53079151	53079556	True	NM_018969,NM_014138	chrX,chrX	+,-	GPR173,FAM156A	-696,-92975
chr8:496737-497177	chr8	+	496741	497221	True	NM_175075,NM_183421	chr8,chr8	-,+	C8orf42,FBXO25	-1410,-139997
chr16:24548234-24550146	chr16	+	24548295	24550160	True	NM_032626,NM_001006634,NM_018703,NM_006910	chr16,chr16,chr16,chr16	+,-,+,+	RBBP6,ARHGAP17,RBBP6,RBBP6	747,476565,747,747
chr4:185222186-185222699	chr4	+	185222475	185222660	True	NM_152683,NM_153343	chr4,chr4	+,-	CCDC111,ENPP6	348106,-83361
chr3:134362960-134363868	chr3	+	134363065	134363909	True	NM_178554,NM_004441	chr3,chr3	-,+	KY,EPHB1	6005,150189
chr2:119731279-119731958	chr2	+	119731428	119731920	True	NM_001426,NM_006770	chr2,chr2	-,+	EN1,MARCO	-125669,-31734
chr6:42899620-42900146	chr6	+	42899774	42900089	True	NM_006586,NM_001008739	chr6,chr6	+,-	CNPY3,C6orf226	-2972,-41220
chr19:41511090-41512483	chr19	+	41511132	41512018	True	NM_030589,NM_000767	chr19,chr19	-,+	CYP2A7,CYP2B6	-122475,-13980
chr1:228873647-228874268	chr1	+	228873728	228874273	True	NM_033445,NM_021205	chr1,chr1	-,+	HIST3H2A,RHOU	-228168,-2963
chrX:153447022-153447309	chrX	+	153447199	153447346	True	NM_001586,NM_000513,NM_001048181	chrX,chrX,chrX	-,+,+	TEX28,OPN1MW,OPN1MW2	76165,738,738
chrX:153447022-153447309	chrX	+	153522125	153522272	False	NM_001205201,NM_001145933,NM_012253,NM_001586	chrX,chrX,chrX,chrX	-,+,+,-	TEX28,TKTL1,TKTL1,TEX28	1349,1754,1754,1239
chrX:153447022-153447309	chrX	+	153484319	153484465	False	NM_001586,NM_000513,NM_001048181	chrX,chrX,chrX	-,+,+	TEX28,OPN1MW,OPN1MW2	39046,737,737
chr11:113186238-113186684	chr11	+	113186241	113186623	True	NM_017868,NR_034101	chr11,chr11	+,-	TTC12,LOC100288346	-1042,-41618
chr10:6444146-6444617	chr10	+	6444350	6444621	True	NR_036502,NM_006257	chr10,chr10	+,-	LOC439949,PRKCQ	177765,177668
chr8:144976376-144976812	chr8	+	144976546	144976828	True	NM_000837,NM_031308	chr8,chr8	+,-	GRINA,EPPK1	87397,-29112
chr14:24610247-24610453	chr14	+	24610293	24610467	True	NM_016049,NM_203402,NM_002818,NM_006263,NM_176783,NM_017999	chr14,chr14,chr14,chr14,chr14,chr14	-,+,-,+,+,+	FAM158A,FITM1,PSME2,PSME1,PSME1,RNF31	380,-9669,5438,-4966,-4966,6191
chr15:64118256-64120226	chr15	+	64118455	64119250	True	NM_003922,NM_203373	chr15,chr15	-,+	HERC1,FBXL22	6953,-228954
chr16:69344649-69344988	chr16	+	69344752	69344988	True	NM_022341,NM_013245	chr16,chr16	-,+	PDF,VPS4A	19560,298
chr3:39195595-39195814	chr3	+	39195651	39195857	True	NM_033027,NM_145755	chr3,chr3	-,+	CSRNP1,TTC21A	-549,-46550
chr8:37265651-37266976	chr8	+	37265867	37266961	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	286339,338653
chr15:65714169-65714371	chr15	+	65714168	65714362	True	NM_020962,NM_016395	chr15,chr15	-,+	IGDCC4,PTPLAD1	1098,108464
chr19:8642314-8642594	chr19	+	8642515	8642611	True	NM_012335,NM_031203	chr19,chr19	-,+	MYO1F,HNRNPM	-184,-132763
chr7:16800548-16802229	chr7	+	16800586	16802257	True	NM_006408,NM_014399	chr7,chr7	-,+	AGR2,TSPAN13	42537,-7288
chr22:30784191-30784592	chr22	+	30784332	30784462	True	NM_033382,NM_001204204,NM_001017981,NM_012429	chr22,chr22,chr22,chr22	+,+,-,+	SEC14L2,SEC14L2,RNF215,SEC14L2	8467,8467,-1030,8467
chr15:76007256-76007668	chr15	+	76007263	76007687	True	NM_175881,NM_001897	chr15,chr15	+,-	ODF3L1,CSPG4	8631,-2074
chr15:76007256-76007668	chr15	-	78170316	78170366	False	NM_001101404,NR_027024	chr15,chr15	+,-	SH2D7,LOC645752	214560,48872
chr4:141318345-141318912	chr4	+	141318348	141318565	True	NM_001153663,NR_033939	chr4,chr4	+,-	SCOC,LOC100129858	-23735,-23802
chr1:89150685-89150999	chr1	+	89150702	89151039	True	NM_001514,NM_006256	chr1,chr1	-,+	GTF2B,PKN2	206312,-831
chr5:110614975-110615687	chr5	+	110615004	110615730	True	NM_001744,NM_139164	chr5,chr5	+,-	CAMK4,STARD4	-55108,232477
chr1:147380177-147380451	chr1	+	147380221	147380499	True	NR_003377,NM_005267	chr1,chr1	-,+	PDZK1P1,GJA8	103882,-5326
chr22:46481820-46482242	chr22	+	46481859	46482233	True	NR_037413,NM_018280,NR_027033	chr22,chr22,chr22	+,-,+	MIR3619,C22orf26,LOC400931	4690,-31835,-33
chr7:5111821-5112046	chr7	+	5111821	5111929	True	NR_015343,NR_034163	chr7,chr7	+,-	LOC389458,ZNF890P	-181,72298
chr10:124910905-124911131	chr10	+	124911003	124911097	True	NM_001007793,NM_005519,NM_022466,NM_004725	chr10,chr10,chr10,chr10	+,+,-,+	BUB3,HMX2,IKZF5,BUB3	2662,-3416,-142692,2662
chr1:153536736-153537507	chr1	+	153536800	153537390	True	NM_006271,NM_005978	chr1,chr1	+,-	S100A1,S100A2	63482,966
chr7:35063741-35064045	chr7	+	35063817	35064082	True	NM_015283,NM_207173	chr7,chr7	-,+	DPY19L1,NPSR1	13621,-365977
chr7:857204-857849	chr7	+	857239	857830	True	NM_025154,NM_001164759,NM_001171945,NM_001171944,NM_001171946	chr7,chr7,chr7,chr7,chr7	+,-,+,+,+	SUN1,PRKAR1B,SUN1,SUN1,SUN1	-1038,-89926,-1038,-1038,-2096
chr12:81472065-81472809	chr12	+	81472142	81472858	True	NM_024560,NM_004664	chr12,chr12	+,-	ACSS3,LIN7A	-384,-140448
chr8:143916785-143918216	chr8	+	143916946	143918081	True	NM_002066,NM_000497	chr8,chr8	+,-	GML,CYP11B1	-780,43205
chr15:57669320-57670083	chr15	+	57669345	57669992	True	NM_032866,NR_015419	chr15,chr15	+,-	CGNL1,LOC145783	-691,-458648
chr10:52641917-52643019	chr10	+	52642298	52642716	True	NM_001098512,NM_138933,NM_138932,NM_014576,NM_001198820,NM_001198818,NM_001198819	chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,-,-,-,-,-,-	PRKG1,A1CF,A1CF,A1CF,A1CF,A1CF,A1CF	108228,2769,2769,2769,2769,2769,2769
chr7:139210311-139211268	chr7	+	139210332	139211283	True	NM_001080511,NM_198508	chr7,chr7	+,-	CLEC2L,KLRG2	-1709,-41875
chr8:15419435-15419652	chr8	+	15419587	15419679	True	NM_139167,NM_178234	chr8,chr8	-,+	SGCZ,TUSC3	-323795,-22042
chr2:119982940-119984272	chr2	+	119983111	119984211	True	NM_182528,NM_001008410,NM_018234,NM_182915	chr2,chr2,chr2,chr2	-,+,+,+	C1QL2,STEAP3,STEAP3,STEAP3	-66640,-1778,-1778,-1778
chr22:24666136-24666383	chr22	+	24666336	24666412	True	NM_001145468,NM_015330,NM_004121	chr22,chr22,chr22	+,+,-	SPECC1L,SPECC1L,GGT5	373,373,-25226
chr19:49123028-49124103	chr19	+	49123306	49123852	True	NM_001204159,NM_001204158,NM_001204160,NM_000979,NM_017708,NM_020126	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,-,-,+	SPHK2,SPHK2,SPHK2,RPL18,FAM83E,SPHK2	-567,-810,4356,-873,-6612,-810
chr1:7913843-7914125	chr1	+	7913912	7914016	True	NM_006786,NM_021995,NM_016831	chr1,chr1,chr1	-,-,+	UTS2,UTS2,PER3	-808,-361,-69201
chr1:155051626-155052066	chr1	+	155051720	155052102	True	NM_144622,NM_004952	chr1,chr1	-,+	DCST2,EFNA3	-45463,-423
chr16:28252278-28252798	chr16	+	28252443	28252506	True	NM_015171,NM_001024401	chr16,chr16	-,+	XPO6,SBK1	-29253,51333
chr15:94841026-94841688	chr15	+	94841061	94841575	True	NM_001159643,NM_018349,NR_034095	chr15,chr15,chr15	+,+,-	MCTP2,MCTP2,LOC400456	51,51,1028805
chrX:85337175-85338652	chrX	+	85337631	85338492	True	NM_001145414,NM_001139514	chrX,chrX	-,+	CHM,DACH2	-35065,64962
chr9:89645847-89646766	chr9	+	89646026	89646488	True	NR_027471,NM_001001709	chr9,chr9	-,+	LOC440173,C9orf170	10611,117070
chr1:178486542-178488234	chr1	+	178486544	178488143	True	NM_001170724,NM_032126,NM_001170722,NM_001170723,NM_004673	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	C1orf49,C1orf49,C1orf49,C1orf49,ANGPTL1	-4384,-4384,-4384,-4384,352122
chr7:50771565-50772591	chr7	+	50771629	50772466	True	NR_033845,NM_001001550	chr7,chr7	+,-	LOC100129427,GRB10	-172223,582
chr1:162343266-162343755	chr1	+	162343284	162343772	True	NM_182581,NM_001085375,NM_001135240	chr1,chr1,chr1	-,+,+	C1orf111,C1orf226,C1orf226	2922,7747,4923
chr3:101715974-101717308	chr3	+	101716004	101717048	True	NR_026934,NM_000986	chr3,chr3	+,-	LOC152225,RPL24	-56352,-310441
chr1:25755008-25756487	chr1	+	25755048	25756492	True	NM_020485,NM_018202,NM_138616,NM_138617,NM_138618	chr1,chr1,chr1,chr1,chr1	-,+,-,-,-	RHCE,TMEM57,RHCE,RHCE,RHCE	-7685,895,-7685,-7685,-7685
chr15:69108089-69109528	chr15	+	69108212	69109552	True	NR_031680,NR_026808,NM_006305	chr15,chr15,chr15	+,-,-	MIR548H4,C15orf28,ANP32A	6750,-8772,3759
chr3:148603675-148604980	chr3	+	148603674	148605018	True	NM_001870,NM_003071	chr3,chr3	+,-	CPA3,HLTF	-20682,199374
chr3:124305597-124306085	chr3	+	124305631	124306109	True	NM_007064,NM_002213	chr3,chr3	+,-	KALRN,ITGB5	-2177,300085
chr1:11071586-11072032	chr1	+	11071781	11072077	True	NM_007375,NM_001170754	chr1,chr1	+,-	TARDBP,C1orf127	601,-29687
chr19:45841408-45842123	chr19	+	45841731	45842071	True	NM_177417,NM_001824	chr19,chr19	+,-	KLC3,CKM	1926,-15498
chr2:211443757-211445507	chr2	+	211443872	211445105	True	NM_001136575,NM_001122634	chr2,chr2	-,+	LANCL1,CPS1	-102373,12973
chr1:68298030-68298486	chr1	+	68298068	68298214	True	NM_001924,NM_018841	chr1,chr1	+,-	GADD45A,GNG12	-147259,991
chrX:48694360-48694613	chrX	+	48694376	48694551	True	NM_013271,NM_181532	chrX,chrX	-,+	PCSK1N,ERAS	-416,-7144
chr19:43518780-43519838	chr19	+	43518938	43519784	True	NR_036584,NM_001113410	chr19,chr19	+,-	LOC100289650,PSG11	-192974,10897
chr21:36041002-36041316	chr21	+	36041079	36041225	True	NM_004414,NM_053277	chr21,chr21	-,+	RCAN1,CLIC6	-53697,462
chr22:25425049-25425379	chr22	+	25425101	25425327	True	NM_001001663,NM_001145206	chr22,chr22	-,+	TMEM211,KIAA1671	-89787,-1211
chr12:8028426-8029690	chr12	+	8028924	8029501	True	NM_153449,NM_024865	chr12,chr12	-,+	SLC2A14,NANOG	-3429,-86980
chr14:60312105-60313046	chr14	+	60312182	60313062	True	NM_021136,NM_022495	chr14,chr14	-,+	RTN1,C14orf135	24545,245566
chr8:42232982-42233525	chr8	+	42233066	42233502	True	NM_014420,NM_001135694	chr8,chr8	-,+	DKK4,VDAC3	1222,15843
chr2:54556026-54557493	chr2	+	54556288	54557233	True	NM_001003937,NM_001100396	chr2,chr2	-,+	TSPYL6,C2orf73	-72879,837
chr15:75661372-75661577	chr15	+	75661400	75661600	True	NM_006715,NM_024608	chr15,chr15	-,+	MAN2C1,NEIL1	-459,-22120
chr8:7955934-7957329	chr8	+	7956138	7957114	True	NR_031689,NR_024362	chr8,chr8	-,+	MIR548I3,FLJ10661	-9527,128977
chr8:7955934-7957329	chr8	-	7045431	7046406	False	NR_027000,NM_001164452	chr8,chr8	-,+	LOC349196,FAM90A14	74658,68019
chr2:26780354-26780574	chr2	+	26780418	26780582	True	NM_001105519,NM_194248	chr2,chr2	+,-	C2orf70,OTOF	4898,1034
chr10:15762098-15763348	chr10	+	15762104	15763379	True	NM_183005,NM_003638	chr10,chr10	+,-	RPP38,ITGA8	-622973,-334
chr17:17586472-17586864	chr17	+	17586767	17586841	True	NM_030665,NM_148172	chr17,chr17	+,-	RAI1,PEMT	-2031,-91773
chr1:32930335-32930768	chr1	+	32930354	32930750	True	NM_001145720,NM_018045	chr1,chr1	+,-	ZBTB8B,BSDC1	-93,-70292
chr19:10629025-10629466	chr19	+	10629065	10629494	True	NM_001166215,NM_030760,NM_032885	chr19,chr19,chr19	-,-,+	S1PR5,S1PR5,ATG4D	-397,-939,25152
chr2:213991134-213991724	chr2	+	213991214	213991735	True	NM_016260,NM_001025436	chr2,chr2	-,+	IKZF2,SPAG16	23375,157380
chr7:33075871-33076514	chr7	+	33075878	33076360	True	NM_016489,NM_001166118,NM_007270	chr7,chr7,chr7	-,-,+	NT5C3,NT5C3,FKBP9	4224,4223,-78924
chr2:33663575-33664936	chr2	+	33663846	33664956	True	NM_015475,NM_170672	chr2,chr2	-,+	FAM98A,RASGRP3	159456,-2489
chr19:57945758-57946383	chr19	+	57945995	57946411	True	NM_020633,NM_001023561	chr19,chr19	-,+	VN1R1,ZNF749	21746,281
chr14:51563129-51564206	chr14	+	51563128	51564205	True	NM_052978,NM_015163,NM_030755	chr14,chr14,chr14	-,-,+	TRIM9,TRIM9,TMX1	-706,-706,142680
chr8:144693882-144694106	chr8	+	144693885	144694063	True	NM_023078,NM_032862,NM_003313	chr8,chr8,chr8	-,+,-	PYCRL,TIGD5,TSTA3	-2101,-13862,5719
chr16:67388271-67389368	chr16	+	67388535	67389197	True	NM_001100915,NM_001161575	chr16,chr16	-,+	KCTD19,LRRC36	-27874,-7329
chr16:30488284-30488593	chr16	+	30488283	30488562	True	NM_012248,NM_002209,NM_001114380	chr16,chr16,chr16	-,+,+	SEPHS2,ITGAL,ITGAL	-31059,-4351,-4351
chr22:21089109-21089466	chr22	+	21089114	21089328	True	NM_002650,NR_026815	chr22,chr22	-,+	PI4KA,TMEM191A	-159,-33763
chr22:21089109-21089466	chr22	+	20398967	20399039	False	NR_003563,NR_026919	chr22,chr22	-,+	PI4KAP1,LOC150197	-272,-205163
chr22:21089109-21089466	chr22	+	21842943	21843015	False	NM_015094,NR_003700	chr22,chr22	+,-	HIC2,PI4KAP2	-71301,28815
chr9:139220795-139221008	chr9	+	139220810	139221012	True	NM_015597,NM_001145638,NR_026964	chr9,chr9,chr9	+,+,-	GPSM1,GPSM1,LOC26102	919,919,817
chr2:68590201-68591794	chr2	+	68590420	68591458	True	NM_015463,NM_002664	chr2,chr2	-,+	CNRIP1,PLEK	-43237,863
chr20:23065953-23066262	chr20	+	23066096	23066310	True	NM_001052,NM_012072	chr20,chr20	+,-	SSTR4,CD93	-50090,717
chr19:36428139-36428719	chr19	+	36428217	36428747	True	NR_033390,NM_024509	chr19,chr19	-,+	TYROBP,LRFN3	-29006,-246
chr7:5086165-5086491	chr7	+	5086303	5086529	True	NM_001204513,NM_021163,NM_001204456,NM_198403	chr7,chr7,chr7,chr7	+,+,+,-	RBAK-LOC389458,RBAK,RBAK,MMD2	-902,-801,-902,-87459
chr7:5086165-5086491	chr7	+	6770271	6770409	False	NR_002217,NM_016265	chr7,chr7	+,-	PMS2CL,ZNF12	4526,-23705
chr8:101658132-101658572	chr8	+	101658204	101658608	True	NR_033962,NM_152628	chr8,chr8	+,-	FLJ42969,SNX31	405673,3335
chrX:53460810-53461219	chrX	+	53460834	53461204	True	NM_001037811,NM_001031745,NM_004493	chrX,chrX,chrX	-,+,-	HSD17B10,RIBC1,HSD17B10	169,-10995,169
chr1:36565916-36566158	chr1	+	36565920	36566184	True	NM_005202,NM_017825	chr1,chr1	-,+	COL8A2,ADPRHL2	-70,-11528
chr16:2004919-2005331	chr16	+	2005070	2005134	True	NR_003142,NM_005061,NM_002952,NR_002327,NR_002326,NM_004548	chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,-,-,+	SNHG9,RPL3L,RPS2,SNORA10,SNORA64,NDUFB10	9862,-391,9743,7383,8023,4382
chr12:1729960-1730960	chr12	+	1730265	1730704	True	NM_032642,NM_030775,NM_152441	chr12,chr12,chr12	+,+,-	WNT5B,WNT5B,FBXL14	7707,-4102,-26934
chr13:113950778-113951117	chr13	+	113950863	113951103	True	NM_024719,NM_005561	chr13,chr13	-,+	GRTP1,LAMP1	67410,365
chr7:141252866-141254377	chr7	+	141252900	141254410	True	NM_018238,NM_001080392	chr7,chr7	+,-	AGK,KIAA1147	-1873,147594
chr5:141256675-141257135	chr5	+	141256734	141257176	True	NM_001142603,NM_032420,NM_002587	chr5,chr5,chr5	+,-,-	KIAA0141,PCDH1,PCDH1	46208,818,818
chr3:142293026-142294248	chr3	+	142293346	142294083	True	NM_001184,NM_001145319	chr3,chr3	-,+	ATR,PLS1	3635,21145
chr12:69634051-69634284	chr12	+	69634056	69634266	True	NM_007007,NR_031692	chr12,chr12	+,-	CPSF6,MIR1279	-790,32782
chr3:150322746-150323415	chr3	+	150322842	150323225	True	NM_016275,NM_014445	chr3,chr3	+,-	SELT,SERP1	-1840,-58414
chr5:70366942-70368158	chr5	+	70366956	70367777	True	NM_022877,NM_001515	chr5,chr5	+,-	SMN2,GTF2H2	-146247,-3459
chr5:70366942-70368158	chr5	-	68851774	68852595	False	NR_027439,NM_001042490,NM_001098728	chr5,chr5,chr5	-,+,+	LOC100272216,GTF2H2D,GTF2H2C	76491,3478,3455
chr5:70366942-70368158	chr5	-	69706920	69707741	False	NR_033417,NR_033968	chr5,chr5	+,-	GTF2H2B,LOC100049076	3455,143467
chr18:43546309-43546984	chr18	+	43546540	43547020	True	NM_020964,NM_138443	chr18,chr18	-,+	EPG5,HAUS1	335,137277
chr16:89686382-89686634	chr16	+	89686472	89686562	True	NM_001083314,NM_001128141,NM_004413	chr16,chr16,chr16	-,+,+	CHMP1A,DPEP1,DPEP1	37617,-6807,437
chr15:66546198-66546576	chr15	+	66546254	66546578	True	NM_133375,NM_032445	chr15,chr15	+,-	DIS3L,MEGF11	39054,-179
chr1:205816643-205818482	chr1	+	205816787	205818220	True	NM_152491,NM_181644	chr1,chr1	-,+	PM20D1,MFSD4	1107,-278727
chr1:6484129-6484353	chr1	+	6484220	6484354	True	NM_019089,NR_036218,NM_031475	chr1,chr1,chr1	-,-,+	HES2,MIR4252,ESPN	-4241,5652,493
chr19:49565031-49565599	chr19	+	49565251	49565475	True	NM_006179,NM_033043,NM_033142	chr19,chr19,chr19	-,+,-	NTF4,CGB5,CGB7	1710,-18200,-6254
chr17:58201738-58202799	chr17	+	58202104	58202816	True	NM_000717,NR_027408	chr17,chr17	+,-	CA4,LOC653653	24485,-21824
chr17:58201738-58202799	chr17	-	58098451	58099163	False	NM_003161,NM_000717,NR_002924	chr17,chr17,chr17	+,+,-	RPS6KB1,CA4,DHX40P1	-128059,128138,-2115
chr3:111395396-111395708	chr3	+	111395395	111395699	True	NM_001185106,NM_024508,NM_153268	chr3,chr3,chr3	+,-,+	PLCXD2,ZBED2,PLCXD2	-1923,-81229,-1923
chr15:75748446-75749864	chr15	+	75748547	75749688	True	NM_001145357,NM_015477,NM_024608,NM_001145358	chr15,chr15,chr15,chr15	-,-,+,-	SIN3A,SIN3A,NEIL1,SIN3A	-423,-4621,-109267,-4460
chr13:20726394-20727160	chr13	+	20726420	20727176	True	NM_021954,NM_001190965	chr13,chr13	-,+	GJA3,ZMYM2	8057,-193497
chr11:71238401-71239747	chr11	+	71238925	71239692	True	NM_021046,NM_001012503,NM_001005405	chr11,chr11,chr11	+,+,-	KRTAP5-8,KRTAP5-7,KRTAP5-11	9378,-663,54286
chr15:57592323-57592983	chr15	+	57592421	57592909	True	NR_015419,NR_024433	chr15,chr15	-,+	LOC145783,LOC283663	-381724,83
chr1:162759294-162760249	chr10	+	38644388	38644439	True	NR_027269,NR_003086	chr10,chr10	-,+	SEPT7L,HSD17B7P2	47392,868
chr4:38868819-38869275	chr4	+	38868867	38869115	True	NM_006068,NM_138389,NR_030300,NR_033290	chr4,chr4,chr4,chr4	-,+,+,+	TLR6,FAM114A1,MIR574,FAM114A1	-10429,238,537,238
chr1:32539537-32540257	chr1	+	32539661	32540150	True	NM_018056,NM_080391	chr1,chr1	+,-	TMEM39B,PTP4A2	-1209,-135673
chr7:64732281-64733670	chr7	+	64732403	64733478	True	NM_001007253,NM_007139	chr7,chr7	-,+	ERV3,ZNF92	-265279,105289
chr10:6131970-6133315	chr10	+	6132119	6133364	True	NM_001145547,NM_032905,NM_000417	chr10,chr10,chr10	+,+,-	RBM17,RBM17,IL2RA	-861,-1221,-27786
chr2:44220952-44222302	chr2	+	44221075	44222034	True	NM_022437,NM_133259	chr2,chr2	+,-	ABCG8,LRPPRC	-155025,1161
chr8:19804876-19805274	chr8	+	19805186	19805286	True	NM_001135691,NM_000237	chr8,chr8	-,+	SLC18A1,LPL	235481,-8657
chr11:31840860-31841390	chr11	+	31840980	31841388	True	NM_001127612,NR_033971,NM_001604,NM_000280	chr11,chr11,chr11,chr11	-,+,-,-	PAX6,DKFZp686K1684,PAX6,PAX6	-1471,-2917,-8101,-8101
chr11:106889014-106889516	chr11	+	106889309	106889427	True	NM_001130037,NM_000855	chr11,chr11	+,-	ELMOD1,GUCY1A2	572389,-138
chr19:53034148-53034552	chr19	+	53034395	53034599	True	NM_001039886,NM_001105549	chr19,chr19	+,-	ZNF808,ZNF83	-3546,107095
chr2:239008527-239008984	chr2	+	239008561	239009001	True	NM_194312,NM_030768	chr2,chr2	+,-	ESPNL,ILKAP	-51,103373
chr12:53715505-53716036	chr12	+	53715553	53715677	True	NM_021640,NM_001173466,NM_015665	chr12,chr12,chr12	+,-,-	C12orf10,AAAS,AAAS	-22134,-141,-141
chr1:53071185-53072578	chr1	+	53071233	53072551	True	NM_015696,NM_015269	chr1,chr1	+,-	GPX7,ZCCHC11	-3251,-52471
chr3:38071504-38072969	chr3	+	38071561	38072681	True	NM_006225,NR_024071,NM_001130964,NM_007335,NM_007337	chr3,chr3,chr3,chr3,chr3	-,-,-,+,+	PLCD1,PLCD1,PLCD1,DLEC1,DLEC1	-407,-5283,-5283,8014,8014
chr7:32104681-32104905	chr7	+	32104713	32104925	True	NM_006658,NM_001191057,NM_001191056,NM_001191059,NM_005020	chr7,chr7,chr7,chr7,chr7	+,-,-,-,-	C7orf16,PDE1C,PDE1C,PDE1C,PDE1C	-378133,5595,5595,6109,6174
chr5:54459156-54459493	chr5	+	54459176	54459357	True	NR_031572,NR_030387,NR_029960,NM_001170402,NM_152623,NM_001145734,NM_001008397	chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,-,-,+	MIR449C,MIR449B,MIR449A,CDC20B,CDC20B,CDC20B,GPX8	8877,7266,7146,9701,9701,9701,-3245
chr4:83484345-83485622	chr4	+	83484345	83485501	True	NM_001080506,NM_021204	chr4,chr4	-,+	TMEM150C,ENOPH1	-1219,-132673
chr19:40197037-40198580	chr19	+	40197039	40198433	True	NM_020129,NM_203471,NM_001828	chr19,chr19,chr19	+,+,-	LGALS14,LGALS14,CLC	-2147,-2147,30293
chr2:129073867-129074158	chr2	+	129073872	129074174	True	NM_004807,NR_027671	chr2,chr2	-,+	HS6ST1,UGGT1	2047,-225141
chr20:29522976-29523190	chr20	+	29523002	29523070	True	NM_001037731,NR_003579	chr20,chr20	-,+	DEFB116,FRG1B	373372,88808
chr18:12410310-12410787	chr18	+	12410327	12410536	True	NM_006796,NM_001142405,NM_006553	chr18,chr18,chr18	-,+,+	AFG3L2,SLMO1,SLMO1	-33052,-2483,-2483
chr16:28890067-28890583	chr16	+	28890073	28890581	True	NM_003321,NM_173201,NM_004320	chr16,chr16,chr16	-,+,+	TUFM,ATP2A1,ATP2A1	-32344,-315,-315
chr2:34183105-34184446	chr2	+	34183120	34184008	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-444242,-229836
chrX:153522235-153522810	chrX	+	153522237	153522401	True	NM_001205201,NM_001145933,NM_012253,NM_001586	chrX,chrX,chrX,chrX	-,+,+,-	TEX28,TKTL1,TKTL1,TEX28	1219,1625,1625,1109
chrX:153522235-153522810	chrX	+	153447311	153447475	False	NM_001586,NM_000513,NM_001048181	chrX,chrX,chrX	-,+,+	TEX28,OPN1MW,OPN1MW2	76035,609,609
chrX:153522235-153522810	chrX	+	153484430	153484791	False	NM_001586,NM_000513,NM_001048181	chrX,chrX,chrX	-,+,+	TEX28,OPN1MW,OPN1MW2	38916,411,411
chr17:73717844-73718154	chr17	+	73718032	73718148	True	NM_000154,NM_000213,NM_001005619,NM_001005731	chr17,chr17,chr17,chr17	-,+,+,+	GALK1,ITGB4,ITGB4,ITGB4	43182,-567,2627,-567
chr16:68033353-68033611	chr16	+	68033486	68033626	True	NM_017803,NM_022355	chr16,chr16	+,-	DUS2L,DPEP2	23577,-122
chr2:87301204-87302692	chr2	+	87301231	87302538	True	NR_026846,NM_001024457	chr2,chr2	-,+	LOC285074,RGPD1	1048,-156544
chr2:87301204-87302692	chr2	-	86948435	86949593	False	NM_022780,NM_001198954	chr2,chr2	+,-	RMND5A,RNF103-VPS24	-1072,-190
chr16:67878516-67879442	chr16	+	67878561	67879463	True	NM_025082,NM_020457,NM_005796	chr16,chr16,chr16	-,+,+	CENPT,THAP11,NUTF2	1948,-2399,1355
chr2:73117629-73118506	chr2	+	73117978	73118540	True	NM_003124,NM_015189	chr2,chr2	+,-	SPR,EXOC6B	-3519,-64801
chr19:54278571-54278820	chr19	+	54278687	54278833	True	NM_033297,NR_029864	chr19,chr19	-,+	NLRP12,MIR371	33176,12095
chr17:28443236-28443581	chr17	+	28443374	28443616	True	NR_036149,NR_029945,NM_032141	chr17,chr17,chr17	-,+,+	MIR3184,MIR423,CCDC55	612,480,217
chr2:102092131-102093168	chr2	+	102092766	102093192	True	NM_004834,NM_001145664	chr2,chr2	+,-	MAP4K4,RFX8	221295,-1601
chr22:50709390-50709661	chr22	+	50709422	50709542	True	NM_031454,NM_002969,NM_002751	chr22,chr22,chr22	+,-,-	SELO,MAPK12,MAPK11	-70065,-9333,-643
chr2:38830352-38831508	chr2	+	38830374	38831557	True	NM_001142650,NM_138801,NM_138394	chr2,chr2,chr2	-,+,-	HNRPLL,GALM,HNRPLL	-196,61494,-196
chr3:166560258-166560561	chr3	+	166560265	166560386	True	NM_001122752,NM_001199202	chr3,chr3	+,-	SERPINI1,ZBBX	893045,537736
chr11:113263213-113264458	chr11	+	113263395	113264501	True	NM_178510,NR_036183	chr11,chr11	+,-	ANKK1,MIR4301	-4936,56359
chr2:43032600-43033131	chr2	+	43032604	43033016	True	NM_020744,NM_012205	chr2,chr2	+,-	MTA3,HAAO	-236987,-12853
chr19:56652264-56652554	chr19	+	56652331	56652477	True	NM_001002836,NM_018337	chr19,chr19	-,+	ZNF787,ZNF444	-19682,78
chr3:10329736-10330985	chr3	+	10329850	10330740	True	NM_001134941,NM_001134946,NM_001134944,NM_001134945,NR_026829,NR_024133,NR_024138,NR_004431,NM_016362,NR_024145,NR_024144,NR_024132,NR_024146,NR_024134,NR_024135,NR_024136,NR_024137	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,+,-,-,+,-,+,+,-,+,-,-,-,-	GHRL,GHRL,GHRL,GHRL,C3orf42,GHRL,GHRL,GHRLOS,GHRL,GHRLOS,GHRLOS,GHRL,GHRLOS,GHRL,GHRL,GHRL,GHRL	1729,3941,3941,3941,-3798,3941,3941,-2463,1729,-2463,-2463,3941,-2463,3941,3941,3941,3941
chr20:32708285-32708954	chr20	+	32708470	32708676	True	NM_016732,NM_003908	chr20,chr20	+,-	RALY,EIF2S2	-126800,-8385
chr15:23088476-23089523	chr15	+	23088584	23089216	True	NM_001142275,NM_144599,NM_001033028	chr15,chr15,chr15	-,-,+	NIPA1,NIPA1,CYFIP1	-1741,-2148,-132890
chr2:138722117-138723886	chr2	+	138722182	138723787	True	NM_007226,NM_001024074,NM_001024075,NM_006895	chr2,chr2,chr2,chr2	-,+,+,+	NXPH2,HNMT,HNMT,HNMT	814083,-425,-425,-425
chr18:43685266-43685706	chr18	+	43685287	43685379	True	NR_026978,NM_138443,NM_004046,NM_001001937	chr18,chr18,chr18,chr18	+,+,-,-	HAUS1,HAUS1,ATP5A1,ATP5A1	-1047,-1047,-7000,-1088
chr11:120110991-120111229	chr11	+	120111053	120111245	True	NM_014352,NM_012101	chr11,chr11	+,-	POU2F3,TRIM29	-153,-102190
chr7:73499583-73500254	chr7	+	73499722	73500124	True	NM_002314,NM_001204426,NM_002914	chr7,chr7,chr7	+,+,-	LIMK1,LIMK1,RFC2	-1666,7361,168664
chr9:130861175-130861496	chr9	+	130861180	130861464	True	NM_052901,NR_033374,NM_001006643,NM_001006642	chr9,chr9,chr9,chr9	+,-,+,+	SLC25A25,LOC100289019,SLC25A25,SLC25A25	-414,19599,-395,-7103
chr12:48354194-48355693	chr12	+	48354417	48355679	True	NM_001143841,NM_001844,NM_001143843,NM_001143842,NM_024056	chr12,chr12,chr12,chr12,chr12	+,-,+,+,+	TMEM106C,COL2A1,TMEM106C,TMEM106C,TMEM106C	1650,42656,1650,1650,1650
chr11:114400946-114402630	chr11	+	114400971	114402589	True	NM_015523,NM_152315	chr11,chr11	+,-	REXO2,FAM55A	-90914,28041
chr21:30390555-30391031	chr21	+	30390560	30391037	True	NM_016940,NM_001001992,NM_001032410,NM_006447	chr21,chr21,chr21,chr21	-,+,+,+	RWDD2B,USP16,USP16,USP16	699,5900,5900,5900
chr12:93966058-93966698	chr12	+	93966110	93966624	True	NM_003877,NM_003348	chr12,chr12	+,-	SOCS2,UBE2N	-2563,-130084
chr3:133291923-133292218	chr3	+	133291962	133292246	True	NM_017548,NM_001134422,NM_001134423,NM_007027	chr3,chr3,chr3,chr3	+,+,+,-	CDV3,CDV3,CDV3,TOPBP1	187,187,1054,88541
chr8:38035338-38035764	chr8	+	38035350	38035630	True	NM_001204878,NM_004874,NM_014462	chr8,chr8,chr8	+,+,-	BAG4,BAG4,LSM1	-1295,-1295,-1324
chr2:220378330-220379006	chr2	+	220378438	220379048	True	NM_001195731,NM_018674,NM_182847	chr2,chr2,chr2	-,+,+	CHPF,ACCN4,ACCN4	28821,-147,-147
chr10:5566323-5566839	chr10	+	5566422	5566830	True	NM_017422,NM_005185	chr10,chr10	-,+	CALML5,CALML3	-24889,93
chr20:1295306-1296668	chr20	+	1295518	1296533	True	NM_014723,NM_015685	chr20,chr20	+,-	SNPH,SDCBP2	-48618,-1201
chr19:37094579-37094936	chr19	+	37094578	37094771	True	NM_001145649,NM_032825,NM_001145650,NR_027239	chr19,chr19,chr19,chr19	-,+,-,-	ZNF529,ZNF382,ZNF529,ZNF529	1470,1449,1470,1470
chr14:96671439-96671966	chr14	+	96671545	96671921	True	NM_000623,NM_018036	chr14,chr14	+,-	BDKRB2,ATG2B	-461,157807
chr9:32384049-32384345	chr9	+	32384048	32384294	True	NM_014314,NM_002197	chr9,chr9	-,+	DDX58,ACO1	142078,306
chr19:18111698-18111901	chr19	+	18111735	18111881	True	NM_001025604,NM_015683,NM_005535	chr19,chr19,chr19	+,+,-	ARRDC2,ARRDC2,IL12RB1	62,7095,85866
chrX:12924307-12925736	chrX	+	12924349	12925486	True	NM_138636,NR_030727	chrX,chrX	+,-	TLR8,LOC349408	3,35985
chr17:2615456-2615718	chr17	+	2615455	2615767	True	NM_015229,NM_001100398	chr17,chr17	-,+	KIAA0664,RAP1GAP2	-528,83964
chrX:139796878-139797614	chrX	+	139797101	139797407	True	NM_004065,NR_028345,NR_028344	chrX,chrX,chrX	-,+,+	CDR1,RP1-177G6.2,RP1-177G6.2	69366,-5228,-5228
chr14:67825737-67826068	chr14	+	67825741	67826093	True	NM_004094,NM_015994	chr14,chr14	+,-	EIF2S1,ATP6V1D	940,677
chr9:125278875-125279599	chr9	+	125278877	125279557	True	NM_012363,NM_054107,NM_001004452	chr9,chr9,chr9	-,+,+	OR1N1,OR1J2,OR1J4	10065,-5860,1862
chr5:174150061-174150628	chr5	+	174150167	174150667	True	NM_002449,NM_000794	chr5,chr5	+,-	MSX2,DRD1	907,720546
chr10:121484635-121485062	chr10	+	121484647	121485027	True	NM_003252,NM_014937,NR_003251	chr10,chr10,chr10	-,+,+	TIAL1,INPP5F,INPP5F	-128106,581,581
chr9:86310945-86312438	chr9	+	86311084	86312117	True	NM_013438,NM_001190727	chr9,chr9	-,+	UBQLN1,C9orf103	11108,-73119
chr11:66025490-66025698	chr11	+	66025599	66025671	True	NM_001134775,NM_001134774,NM_022822,NM_001134776,NM_020470	chr11,chr11,chr11,chr11,chr11	+,+,+,+,-	KLC2,KLC2,KLC2,KLC2,YIF1A	-885,-476,-476,-559,31017
chr14:68143309-68144555	chr14	+	68143390	68144428	True	NM_006370,NM_152443	chr14,chr14	-,+	VTI1B,RDH12	-1788,24174
chr11:123995094-123996035	chr11	+	123995096	123995949	True	NM_198315,NM_014622,NM_001130142,NM_001004463	chr11,chr11,chr11,chr11	+,+,+,-	VWA5A,VWA5A,VWA5A,OR10G7	-9044,-9044,-9044,-85388
chr8:38644246-38644479	chr8	+	38644301	38644424	True	NM_006283,NR_003129,NM_001122824	chr8,chr8,chr8	+,-,+	TACC1,RNF5P1,TACC1	297,-185526,297
chrX:49043787-49044009	chrX	+	49043958	49044036	True	NM_002668,NM_006150	chrX,chrX	+,-	PLP2,PRICKLE3	-15825,-1182
chr14:95078255-95079732	chr14	+	95078557	95079720	True	NM_001085,NM_173850	chr14,chr14	+,-	SERPINA3,SERPINA12	52,-94376
chr16:57578982-57579828	chr16	+	57579002	57579698	True	NM_033212,NM_153837	chr16,chr16	-,+	CCDC102A,GPR114	-8525,-2458
chr3:168864431-168864824	chr3	+	168864431	168864841	True	NM_001163999,NR_030294,NM_001164000,NM_005241,NM_001105078,NM_001105077	chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-	MECOM,MIR551B,MECOM,MECOM,MECOM,MECOM	-338,-594840,731,-338,-31,-338
chr20:60876789-60877065	chr20	+	60877014	60877074	True	NM_007002,NM_175573,NM_005560	chr20,chr20,chr20	+,+,-	ADRM1,ADRM1,LAMA5	952,952,65344
chr4:71554834-71555166	chr4	+	71554887	71555209	True	NM_144646,NM_020368	chr4,chr4	-,+	IGJ,UTP3	-22539,-742
chr7:106506040-106507813	chr7	+	106506106	106507613	True	NM_175884,NM_002649	chr7,chr7	-,+	FLJ36031,PIK3CG	-204472,-236
chr14:100700230-100702114	chr14	+	100700706	100701919	True	NM_003403,NM_001039355	chr14,chr14	+,-	YY1,SLC25A29	3182,70992
chr8:22225685-22226140	chr8	+	22225767	22225991	True	NM_015359,NM_001128431,NR_029714,NM_001135153,NM_001135154	chr8,chr8,chr8,chr8,chr8	+,+,-,+,+	SLC39A14,SLC39A14,MIR320A,SLC39A14,SLC39A14	-1056,-1056,-123211,-768,-1056
chr7:47989418-47990228	chr7	+	47989432	47990094	True	NM_138295,NM_001100159	chr7,chr7	-,+	PKD1L1,C7orf57	-1361,85022
chr3:192424257-192425907	chr3	+	192424309	192425739	True	NM_020386,NM_004113	chr3,chr3	+,-	HRASLS,FGF12	533178,19716
chr8:37393670-37395651	chr8	+	37393685	37395197	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	158103,210417
chr1:161283491-161283786	chr1	+	161283505	161283766	True	NM_003001,NM_001035511,NM_000530,NM_001035513,NM_001035512	chr1,chr1,chr1,chr1,chr1	+,+,-,+,+	SDHC,SDHC,MPZ,SDHC,SDHC	399,399,-3743,399,399
chr19:56263900-56265519	chr19	+	56264696	56265568	True	NM_001145014,NM_176820	chr19,chr19	+,-	RFPL4A,NLRP9	4938,-14928
chr16:67219463-67220727	chr16	+	67219603	67220715	True	NM_001950,NM_178516,NM_001040715	chr16,chr16,chr16	+,-,-	E2F4,EXOC3L1,KIAA0895L	5352,3442,-1720
chr5:34696534-34697463	chr5	+	34696552	34696924	True	NR_026591,NM_001145523	chr5,chr5	-,+	RAD1,RAI14	218859,-8940
chr5:176943807-176944054	chr5	+	176943913	176944095	True	NM_001144875,NM_001174102,NM_024872,NM_001144876,NM_016222	chr5,chr5,chr5,chr5,chr5	-,+,-,-,-	DOK3,PRR7,DOK3,DOK3,DDX41	-6486,-68638,-7055,-6486,-24
chr15:98419174-98420069	chr15	+	98419290	98420083	True	NM_183376,NR_024172,NR_024173	chr15,chr15,chr15	+,-,-	ARRDC4,LOC91948,LOC91948	83849,-1631,-1631
chr16:56707992-56709382	chr16	+	56708074	56709360	True	NM_005952,NM_005950,NR_003669,NM_005951	chr16,chr16,chr16,chr16	+,-,+,+	MT1X,MT1G,MT1IP,MT1H	7021,-6097,288,-4399
chr2:18057683-18059533	chr2	+	18057725	18059517	True	NM_024624,NM_002252	chr2,chr2	-,+	SMC6,KCNS3	-122629,427
chr12:121123436-121124136	chr12	+	121123496	121124074	True	NM_014730,NM_198202	chr12,chr12	+,-	MLEC,POP5	874,-104295
chr15:40061402-40063079	chr15	+	40061493	40063072	True	NM_001013703,NM_152597	chr15,chr15	+,-	EIF2AK4,FSIP1	163274,12017
chr8:32505513-32505820	chr8	+	32505529	32505779	True	NM_013959,NM_032664	chr8,chr8	+,-	NRG1,FUT10	-1330,824935
chr8:38009038-38009909	chr8	+	38009209	38009729	True	NM_001204878,NM_000349	chr8,chr8	+,-	BAG4,STAR	24376,-609
chr6:15036667-15038304	chr6	+	15036916	15038162	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	208364,625177
chr8:86794188-86795310	chr8	+	86795111	86795191	True	NR_003594,NM_172239	chr8,chr8	-,-	REXO1L2P,REXO1L1	-6789,-5805
chr8:86794188-86795310	chr8	+	86767638	86767718	False	NR_003594	chr8	-	REXO1L2P	8460
chr8:86794188-86795310	chr8	+	86779833	86779913	False	NR_003594,NM_172239	chr8,chr8	-,-	REXO1L2P,REXO1L1	-3705,9443
chr4:5711981-5712590	chr4	+	5712066	5712578	True	NM_147127,NM_001166136,NM_153717	chr4,chr4,chr4	-,-,+	EVC2,EVC2,EVC	-1772,-791,345
chr17:7389374-7390625	chr17	+	7389422	7390339	True	NM_000937,NM_020899,NM_001128833,NM_001102614	chr17,chr17,chr17,chr17	+,-,-,+	POLR2A,ZBTB4,ZBTB4,AMAC1L3	-1784,-1854,-6478,-4761
chr3:133290345-133291050	chr3	+	133290757	133290942	True	NM_017548,NM_001134422,NM_001134423,NM_007027	chr3,chr3,chr3,chr3	+,+,+,-	CDV3,CDV3,CDV3,TOPBP1	1491,1491,2358,89846
chr12:118500080-118500302	chr12	+	118500182	118500348	True	NM_018639,NM_181578	chr12,chr12	-,+	WSB2,RFC5	-1231,-45725
chr3:161149495-161150482	chr3	+	161149637	161150505	True	NM_001080440,NM_001040100	chr3,chr3	+,-	OTOL1,C3orf57	64090,-59766
chr8:145164653-145164934	chr8	+	145164657	145164973	True	NM_030974,NR_024207,NM_032272	chr8,chr8,chr8	-,+,+	SHARPIN,KIAA1875,MAF1	-5517,-2079,-5403
chr1:215752421-215752963	chr1	+	215752424	215752837	True	NM_206933,NM_016121	chr1,chr1	-,+	USH2A,KCTD3	843964,-11740
chr2:27295696-27297390	chr2	+	27295943	27297231	True	NM_007046,NM_001134693	chr2,chr2	+,-	EMILIN1,OST4	4203,-1376
chr7:77507388-77508788	chr7	+	77507418	77508599	True	NM_032936,NM_020432	chr7,chr7	-,+	TMEM60,PHTF2	-79671,-38022
chr16:68277205-68277810	chr16	+	68277225	68277487	True	NM_024939,NM_012320	chr16,chr16	-,+	ESRP2,PLA2G15	-7089,1759
chr19:13070071-13070826	chr19	+	13070307	13070379	True	NM_152654,NM_052850	chr19,chr19	+,-	DAND5,GADD45GIP1	10052,-2257
chr8:101574473-101575603	chr8	+	101574702	101575587	True	NM_198401,NM_003114	chr8,chr8	-,+	ANKRD46,SPAG1	-2690,-404191
chr17:17382912-17383375	chr17	+	17383143	17383423	True	NM_018019,NM_001199989	chr17,chr17	+,-	MED9,RASD1	-2894,16336
chr15:58284528-58284999	chr15	+	58284549	58284945	True	NM_020980,NM_170697	chr15,chr15	+,-	AQP9,ALDH1A2	145462,21340
chr15:80198736-80200395	chr15	+	80199348	80200334	True	NM_006441,NM_001199758,NM_001100879,NR_028330	chr15,chr15,chr15,chr15	-,-,-,+	MTHFS,MTHFS,ST20,C15orf37	-9957,-9721,7317,14778
chr1:33840658-33840978	chr1	+	33840724	33840996	True	NM_145238,NM_198040	chr1,chr1	+,-	ZSCAN20,PHC2	97235,248
chr2:198317912-198318137	chr2	+	198317987	198318151	True	NM_025147,NM_001005526	chr2,chr2	+,-	COQ10B,SF3B1	79,-18216
chr2:73879158-73880814	chr2	+	73879261	73880198	True	NM_003960,NR_003683	chr2,chr2	-,+	NAT8,ALMS1P	-9724,-7274
chr16:30123719-30124185	chr16	+	30123827	30124229	True	NR_027081,NM_024307	chr16,chr16	+,-	LOC100271831,GDPD3	1203,699
chr12:121648436-121649046	chr12	+	121648708	121648978	True	NM_002560,NM_172226	chr12,chr12	+,-	P2RX4,CAMKK2	-1095,85628
chr20:47895575-47895881	chr20	+	47895580	47895804	True	NR_003605,NR_003604,NR_002433,NR_003606,NR_003695,NR_036658,NR_036659,NM_021035,NR_003030	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,+,+,+,+,+,+,-,+	NCRNA00275,NCRNA00275,SNORD12C,NCRNA00275,SNORD12B,NCRNA00275,NCRNA00275,ZNFX1,SNORD12	-916,-916,-149,-916,1045,-916,-452,-824,1415
chr9:134165480-134165686	chr9	+	134165607	134165671	True	NM_032728,NM_033387	chr9,chr9	+,-	PPAPDC3,FAM78A	-577,-13701
chr3:69118015-69118684	chr3	+	69118064	69118378	True	NM_006407,NM_003968	chr3,chr3	+,-	ARL6IP5,UBA3	15711,11206
chr14:77423277-77424775	chr14	+	77423329	77424609	True	NM_194287,NM_024496	chr14,chr14	+,-	C14orf166B,IRF2BPL	-130655,70482
chr7:42277762-42278059	chr7	+	42277819	42278073	True	NM_000168,NR_027119	chr7,chr7	-,+	GLI3,LOC285954	-1201,-544324
chr4:1724787-1725236	chr4	+	1724788	1725270	True	NM_001127266,NM_006342,NM_138385	chr4,chr4,chr4	-,+,-	TMEM129,TACC3,TMEM129	-1704,-1580,-1704
chr10:22997296-22998496	chr10	+	22997302	22998536	True	NM_005028,NM_173081	chr10,chr10	-,+	PIP4K2A,ARMC3	5018,218417
chr16:57767916-57768643	chr16	+	57768053	57768652	True	NM_001130099,NM_005886	chr16,chr16	-,+	KIFC3,KATNB1	63327,1007
chr11:66795340-66796053	chr11	+	66795380	66796028	True	NM_177963,NM_001040716,NM_001177880	chr11,chr11,chr11	+,-,+	SYT12,PC,SYT12	-4615,-69533,-5241
chr11:118436424-118437127	chr11	+	118436486	118436888	True	NM_020153,NM_001142281,NM_001168618,NM_001655	chr11,chr11,chr11,chr11	-,+,-,+	IFT46,ARCN1,IFT46,ARCN1	17,6213,17,6213
chr3:51430545-51430893	chr3	+	51430613	51430921	True	NM_001171904,NM_006010,NM_013286	chr3,chr3,chr3	-,+,+	VPRBP,MANF,RBM15B	103147,-7972,-1965
chr1:151129206-151129671	chr1	+	151129245	151129499	True	NM_024575,NM_001204848,NR_037937,NM_001204856,NM_001136543,NM_024041,NM_212551	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,-,+,-	TNFAIP8L2,TNFAIP8L2-SCNM1,SCNM1,SCNM1,LYSMD1,SCNM1,LYSMD1	-198,-198,8998,8998,8975,8998,8921
chr9:130955254-130955456	chr9	+	130955271	130955455	True	NM_001005336,NM_001131018,NM_001131017,NM_001131016	chr9,chr9,chr9,chr9	+,-,-,-	DNM1,CIZ1,CIZ1,CIZ1	10207,-1403,-1403,-1403
chr19:17969641-17970082	chr19	+	17969917	17970101	True	NM_000980,NM_000215,NR_001593,NR_000012	chr19,chr19,chr19,chr19	+,-,+,+	RPL18A,JAK3,RPL18AP3,SNORA68	629,-11076,625,3295
chr19:39393631-39394430	chr19	+	39393820	39394331	True	NM_002503,NM_030593,NM_001001716,NM_012237,NR_034146,NM_001193286	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,-,-,-	NFKBIB,SIRT2,NFKBIB,SIRT2,SIRT2,SIRT2	-3256,-3318,-3256,-3357,-9025,-3318
chr11:5649486-5650226	chr11	+	5649607	5650145	True	NM_130390,NM_033034,NM_021616,NM_001003827	chr11,chr11,chr11,chr11	+,-,+,+	TRIM34,TRIM5,TRIM34,TRIM34	3339,56244,-3451,-8484
chr3:150435656-150436346	chr3	+	150435689	150436179	True	NM_016275,NM_152394	chr3,chr3	+,-	SELT,FAM194A	-114682,-13947
chr1:119908760-119909099	chr1	+	119908829	119909031	True	NM_001005783,NM_016527,NM_201263	chr1,chr1,chr1	+,+,-	HAO2,HAO2,WARS2	2370,2370,-225534
chr2:9770600-9770806	chr2	+	9770615	9770779	True	NM_006826,NM_001039613	chr2,chr2	-,+	YWHAQ,IAH1	377,-155996
chr1:24282990-24283839	chr1	+	24282993	24283689	True	NM_001191006,NM_017761	chr1,chr1	-,+	SRSF10,PNRC2	23314,2611
chr17:77480388-77480963	chr17	+	77480458	77481000	True	NM_178543,NM_001082575	chr17,chr17	+,-	ENPP7,RBFOX3	223881,-1895
chr8:93074970-93075559	chr8	+	93075036	93075608	True	NM_004349,NM_052832	chr8,chr8	-,+	RUNX1T1,SLC26A7	-13,-813571
chr3:17784083-17784303	chr3	+	17784127	17784313	True	NM_014744,NM_001134380,NR_037465	chr3,chr3,chr3	-,-,+	TBC1D5,TBC1D5,MIR3714	-1728,-13,-809490
chr17:79636334-79636548	chr17	+	79636462	79636536	True	NM_199287,NM_001039842	chr17,chr17	+,-	CCDC137,C17orf90	-2753,-2844
chr1:33284938-33285586	chr1	+	33285206	33285633	True	NM_003680,NM_001017406,NM_022753	chr1,chr1,chr1	-,+,+	YARS,S100PBP,S100PBP	-1573,-2082,-2082
chr13:52373614-52375413	chr13	+	52373637	52375275	True	NM_031290,NM_001031719,NM_024705	chr13,chr13,chr13	+,-,-	CCDC70,DHRS12,DHRS12	60841,3009,3068
chr21:30260817-30262754	chr21	+	30260947	30262637	True	NM_013240,NM_001001992,NM_182749	chr21,chr21,chr21	-,+,-	N6AMT1,USP16,N6AMT1	-3254,134300,-3254
chr7:56359865-56360547	chr7	+	56360032	56360158	True	NR_029420,NR_026929	chr7,chr7	-,+	LOC650226,DKFZp434L192	155966,203757
chr5:140242976-140243299	chr5	+	140242992	140243224	True	NM_031861,NM_031860,NM_002109,NM_031859,NM_018902,NM_018901	chr5,chr5,chr5,chr5,chr5,chr5	+,+,-,+,+,+	PCDHA11,PCDHA10,HARS,PCDHA10,PCDHA11,PCDHA10	4606,-7409,-172021,-7409,4606,-7409
chr6:26056538-26057290	chr6	+	26056641	26057229	True	NM_005319,NM_003531	chr6,chr6	-,+	HIST1H1C,HIST1H3C	38,-11053
chr22:37172650-37173626	chr22	+	37172832	37173596	True	NM_001177701,NR_033531,NM_006860,NM_000631,NM_001177702	chr22,chr22,chr22,chr22,chr22	-,-,-,+,-	IFT27,IFT27,IFT27,NCF4,IFT27	-660,-660,-660,83433,-8758
chr5:56204194-56205066	chr5	+	56204218	56204925	True	NM_153706,NM_001171990,NM_152622	chr5,chr5,chr5	+,+,-	C5orf35,C5orf35,MIER3	161,161,43079
chr13:113244583-113246369	chr13	+	113244661	113246173	True	NM_207440,NM_006322	chr13,chr13	+,-	C13orf35,TUBGCP3	55184,-2180
chr1:110577664-110577906	chr1	+	110577811	110577955	True	NM_033088,NM_006492	chr1,chr1	+,-	FAM40A,ALX3	-621,35417
chr22:17680475-17681007	chr22	+	17680504	17680696	True	NM_177405,NR_024483	chr22,chr22	-,+	CECR1,CECR4	9,-40276
chr20:37216539-37217037	chr20	+	37216695	37217083	True	NM_001018082,NR_027241	chr20,chr20	+,-	ADIG,LOC388796	-6909,-152677
chr7:32537422-32538495	chr7	+	32537559	32538300	True	NM_012322,NM_001130710,NR_024466,NM_001139499,NM_015060	chr7,chr7,chr7,chr7,chr7	-,-,-,-,+	LSM5,LSM5,LSM5,LSM5,AVL9	-7536,-2689,-7084,-2689,-2441
chr3:38066916-38067729	chr3	+	38066975	38067552	True	NM_006225,NR_024071,NM_001130964,NM_007335	chr3,chr3,chr3,chr3	-,-,-,+	PLCD1,PLCD1,PLCD1,DLEC1	3659,-697,-697,13143
chr10:47403111-47404619	chr10	+	47403149	47404632	True	NR_024495,NR_027634	chr10,chr10	-,+	LOC642826,FAM35B2	-159655,-23485
chr10:47403111-47404619	chr10	+	88933735	88934408	False	NM_005271,NM_001099338	chr10,chr10	-,+	GLUD1,FAM22A	-78959,50796
chr10:47403111-47404619	chr10	+	46921080	46922564	False	NR_027632,NM_181519	chr10,chr10	+,-	FAM35B,SYT15	-23495,48087
chr3:93692742-93693394	chr3	+	93692834	93693287	True	NM_144996,NM_000313,NM_182896,NM_001174151,NM_001174150,NR_033427	chr3,chr3,chr3,chr3,chr3,chr3	+,-,+,+,+,+	ARL13B,PROS1,ARL13B,ARL13B,ARL13B,ARL13B	5695,74,5695,5695,5695,5695
chr1:16563751-16564811	chr1	+	16563832	16564619	True	NM_001114600,NM_030907	chr1,chr1	+,-	C1orf144,RSG1	128963,-173
chr3:140775108-140775667	chr3	+	140775122	140775494	True	NM_001178140,NM_080862	chr3,chr3	-,+	TFDP2,SPSB4	943785,-4437
chr16:4354858-4355193	chr16	+	4354894	4355115	True	NM_032575,NM_003223	chr16,chr16	+,-	GLIS2,TFAP4	27109,-31893
chr1:89990890-89992838	chr1	+	89991068	89992865	True	NR_033981,NM_001134476	chr1,chr1	-,+	FLJ27354,LRRC8B	105643,-724
chr17:6544021-6544316	chr17	+	6544074	6544290	True	NM_014804,NM_032731	chr17,chr17	-,+	KIAA0753,TXNDC17	7,-31
chr19:55016119-55016445	chr19	+	55016189	55016423	True	NM_145057,NM_021270,NM_002288	chr19,chr19,chr19	-,+,+	CDC42EP5,LAIR2,LAIR2	-31767,-2228,-2228
chr19:7503590-7503849	chr19	+	7503596	7503720	True	NR_024491,NM_001130955	chr19,chr19	-,+	LOC100128573,ARHGEF18	34577,853
chr6:31793207-31793808	chr6_qbl_hap6	+	3086858	3087410	False	NM_001040437,NR_002745,NM_005527,NM_005346,NM_005345,NM_001040438	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,HSPA1B,HSPA1A,C6orf48	8941,9288,-10376,1752,-9973,8941
chr6:31793207-31793808	chr6_dbb_hap3	+	3078794	3079346	False	NM_001040437,NR_002745,NM_005527,NM_005346,NM_005345,NM_001040438	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,HSPA1B,HSPA1A,C6orf48	8933,9280,-10372,1752,-9969,8933
chr6:31793207-31793808	chr6	+	31793207	31793759	True	NM_001040437,NR_002745,NM_005527,NM_005346,NM_005345,NM_001040438	chr6,chr6,chr6,chr6,chr6,chr6	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,HSPA1B,HSPA1A,C6orf48	8933,9280,-10372,1752,-9969,8933
chr6:31793207-31793808	chr6_apd_hap1	+	3107971	3108523	False	NM_001040437,NR_002745,NM_005527,NM_005346,NM_005345,NM_001040438	chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,HSPA1B,HSPA1A,C6orf48	8923,9270,-10375,1752,-9972,8923
chr6:31793207-31793808	chr6_cox_hap2	+	3302790	3303341	False	NM_001040437,NR_002745,NM_005527,NM_005346,NM_005345,NM_001040438	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,HSPA1B,HSPA1A,C6orf48	8927,9274,-10375,1752,-9972,8927
chr5:50679322-50680445	chr5	+	50679483	50680438	True	NM_198449,NM_002202	chr5,chr5	-,+	EMB,ISL1	-942249,-576
chr2:172014859-172015925	chr2	+	172015006	172015957	True	NM_012290,NM_015530	chr2,chr2	-,+	TLK1,GORASP2	1504,-230034
chr3:179170260-179171067	chr3	+	179170357	179170894	True	NM_033540,NM_021629	chr3,chr3	+,-	MFN1,GNB4	-104935,-986
chr17:42218974-42219391	chr17	+	42219118	42219438	True	NM_001171251,NM_005474,NM_024032	chr17,chr17,chr17	+,-,+	C17orf53,HDAC5,C17orf53	7,-18104,7
chr6:42848544-42848923	chr6	+	42848544	42848798	True	NM_001008739,NM_198486	chr6,chr6	-,+	C6orf226,RPL7L1	9806,-935
chr17:55333198-55333430	chr17	+	55333242	55333410	True	NM_004645,NM_138962,NM_170721	chr17,chr17,chr17	-,+,+	COIL,MSI2,MSI2	-294831,520,963
chr20:25127962-25128296	chr20	+	25128067	25128317	True	NR_027092,NR_027093,NR_027091,NM_001114089	chr20,chr20,chr20,chr20	-,-,-,+	LOC284798,LOC284798,LOC284798,ENTPD6	1094,362,1159,48021
chr5:25263883-25265117	chr5	+	25264133	25265118	True	NR_037896,NM_020227	chr5,chr5	-,+	LOC340107,PRDM9	-423441,-1756460
chr5:148759302-148760296	chr5	+	148759390	148760314	True	NM_024028,NM_014443	chr5,chr5	+,-	PCYOX1L,IL17B	-21871,-552
chr1:113501981-113503143	chr1	+	113502406	113503183	True	NM_003051,NR_002796,NM_001166496	chr1,chr1,chr1	-,+,-	SLC16A1,AKR7A2P1,SLC16A1	-3431,-36493,-3721
chr3:14214003-14214224	chr3	+	14214010	14214273	True	NM_004628,NM_001145769,NR_027299,NM_014463	chr3,chr3,chr3,chr3	-,-,-,+	XPC,XPC,XPC,LSM3	5956,5956,5956,5954
chr12:103797045-103797475	chr12	+	103797216	103797400	True	NM_198521,NM_017564	chr12,chr12	-,+	C12orf42,STAB2	92396,183668
chr2:183359847-183361577	chr2	+	183359958	183361595	True	NM_018981,NM_005019	chr2,chr2	+,-	DNAJC10,PDE1A	219403,25708
chr19:52852916-52853650	chr19	+	52853116	52853641	True	NM_001102657,NM_173530	chr19,chr19	-,+	ZNF836,ZNF610	-178220,-4488
chr20:34699563-34700374	chr20	+	34699728	34700270	True	NM_177996,NR_027451	chr20,chr20	+,-	EPB41L1,LOC647979	77,-60846
chr20:43031909-43032582	chr20	+	43031914	43032410	True	NM_178850,NR_037419,NM_000457,NM_001080472,NM_178849	chr20,chr20,chr20,chr20,chr20	+,+,+,-,+	HNF4A,MIR3646,HNF4A,FITM2,HNF4A	-2041,4349,-2041,-92025,-2041
chr17:40174081-40174471	chr17	+	40174331	40174467	True	NM_003315,NM_001144766,NR_029431,NM_001144929,NM_001144928,NM_017595,NM_001144927,NM_001001349	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,+,+,+,+,+	DNAJC7,DNAJC7,DNAJC7,NKIRAS2,NKIRAS2,NKIRAS2,NKIRAS2,NKIRAS2	-4616,-5148,-4616,-2295,-2295,-2295,-2295,-4788
chr12:10340620-10341538	chr12	+	10340713	10340813	True	NM_153022,NM_002543	chr12,chr12	+,-	C12orf59,OLR1	-9216,-15923
chr3:28545475-28546336	chr3	+	28545830	28546323	True	NM_001040432,NM_001134433	chr3,chr3	+,-	ZCWPW2,AZI2	-113908,-155212
chrX:142723824-142724026	chrX	+	142723878	142724043	True	NM_001012989,NM_001184750,NM_001184749,NM_173078	chrX,chrX,chrX,chrX	+,-,-,-	UBE2NL,SLITRK4,SLITRK4,SLITRK4	243129,-1559,-23,-859
chr3:33260741-33261740	chr3	+	33260751	33261336	True	NM_012157,NM_015551	chr3,chr3	+,-	FBXL2,SUSD5	57597,-44
chr1:113054304-113055910	chr1	+	113054472	113055863	True	NR_036210,NM_024494	chr1,chr1	-,+	MIR4256,WNT2B	-50017,-3153
chr6:100053995-100054516	chr6	+	100054037	100054544	True	NM_005190,NM_021620	chr6,chr6	-,+	CCNC,PRDM13	-37347,105
chr1:116182862-116184402	chr1	+	116183017	116184052	True	NM_138959,NM_001232,NM_001172412,NM_001172411	chr1,chr1,chr1,chr1	+,-,+,+	VANGL1,CASQ2,VANGL1,VANGL1	521,127435,1197,521
chr9:116916832-116917073	chr9	+	116916879	116917115	True	NM_138424,NM_032888	chr9,chr9	-,+	KIF12,COL27A1	-55542,1115
chr11:66102276-66102578	chr11	+	66102323	66102577	True	NM_153266,NM_004292	chr11,chr11	+,-	TMEM151A,RIN1	-43001,1473
chr17:77071543-77071743	chr17	+	77071598	77071676	True	NM_138793,NM_001042573	chr17,chr17	-,+	CANT1,ENGASE	-65699,-630
chr17:17189317-17189541	chr17	+	17189363	17189583	True	NM_003653,NM_001199125,NM_020201	chr17,chr17,chr17	-,-,+	COPS3,COPS3,NT5M	-4746,-5351,17096
chr19:20188616-20188927	chr19	+	20188637	20188875	True	NM_033196,NM_007138	chr19,chr19	-,+	ZNF682,ZNF90	-38360,9
chr19:11590489-11590706	chr19	+	11590526	11590654	True	NM_032281,NM_001420,NM_002743	chr19,chr19,chr19	-,-,+	ELAVL3,ELAVL3,PRKCSH	1199,1199,-44308
chr1:85721332-85722202	chr1	+	85721588	85722039	True	NR_024113,NM_145172,NM_198077	chr1,chr1,chr1	-,+,-	C1orf52,WDR63,C1orf52	3377,-193654,3377
chr5:65445124-65446759	chr5	+	65445210	65446605	True	NR_028474,NM_001077199,NM_139168	chr5,chr5,chr5	-,+,+	LOC100303749,SREK1,SREK1	-203809,-5179,-4601
chr1:90296241-90296555	chr1	+	90296355	90296449	True	NM_018103,NM_001134479,NR_002830	chr1,chr1,chr1	+,+,-	LRRC8D,LRRC8D,GEMIN8P4	-8926,-9833,164132
chr14:76645142-76646005	chr14	+	76645342	76646049	True	NM_017972,NM_003239	chr14,chr14	+,-	C14orf118,TGFB3	-27140,-197250
chr19:38075719-38076047	chr19	+	38075887	38076093	True	NM_001172225,NM_001172226,NM_016536	chr19,chr19,chr19	+,+,-	ZNF540,ZNF540,ZNF571	9637,9637,9630
chr22:37544171-37544599	chr22	+	37544222	37544540	True	NM_000878,NM_024681	chr22,chr22	-,+	IL2RB,KCTD17	1472,-96494
chr11:44972800-44973493	chr11	+	44972835	44973487	True	NM_006034,NR_026681,NM_001076787	chr11,chr11,chr11	-,+,-	TP53I11,LOC221122,TP53I11	-227,21965,-227
chr9:79113611-79114202	chr9	+	79113716	79114029	True	NM_018339,NM_001097636	chr9,chr9	-,+	RFK,GCNT1	-104272,1519
chr2:74871519-74872263	chr2	+	74871711	74872111	True	NM_138804,NM_004263	chr2,chr2	-,+	C2orf65,SEMA4F	3103,9281
chr7:73080339-73080917	chr7	+	73080392	73080688	True	NM_001077621,NM_032317	chr7,chr7	+,-	VPS37D,DNAJC30	1485,17143
chr19:23866382-23866986	chr19	+	23866512	23866741	True	NM_138330,NR_003662	chr19,chr19	-,+	ZNF675,RPSAP58	3335,79074
chr12:69861910-69863007	chr12	+	69862118	69862931	True	NM_006654,NM_001042555,NR_037475	chr12,chr12,chr12	+,+,-	FRS2,FRS2,MIR3913-1	1197,1197,115722
chr10:98944526-98945094	chr10	+	98944774	98944956	True	NM_005479,NM_003061	chr10,chr10	+,-	FRAT1,SLIT1	134065,777
chr10:96491059-96492791	chr10	+	96491603	96492809	True	NM_000770,NM_000769	chr10,chr10	-,+	CYP2C8,CYP2C19	336495,29653
chr12:1736688-1737363	chr12	+	1736781	1737325	True	NM_032642,NR_037422	chr12,chr12	+,-	WNT5B,MIR3649	1086,32271
chr9:136891611-136891925	chr9	+	136891696	136891952	True	NM_003371,NR_015427	chr9,chr9	-,+	VAV2,NCRNA00094	-34250,-1186
chr22:41347615-41349287	chr22	+	41348031	41348830	True	NM_014248,NM_145174	chr22,chr22	+,-	RBX1,DNAJB7	-731,-89901
chr11:114448246-114449424	chr11	+	114448307	114449383	True	NM_001077639,NM_182495,NM_152315	chr11,chr11,chr11	-,+,-	FAM55D,FAM55B,FAM55A	17151,99816,-17727
chr15:63564650-63566390	chr15	+	63565418	63566293	True	NM_001218,NM_031301,NM_001145646	chr15,chr15,chr15	-,+,+	CA12,APH1B,APH1B	107835,3455,3455
chr19:58448396-58448919	chr19	+	58448526	58448968	True	NM_133460,NR_036508	chr19,chr19	-,+	ZNF418,LOC100128398	-1786,65293
chr5:171433637-171433898	chr5	+	171433757	171433927	True	NM_012300,NM_001171183,NM_033645,NM_033644	chr5,chr5,chr5,chr5	-,+,-,-	FBXW11,EFCAB9,FBXW11,FBXW11	0,187248,0,0
chr17:41044062-41044520	chr17	+	41044109	41044241	True	NM_000151,NR_027254	chr17,chr17	+,-	G6PC,LOC388387	8573,6560
chr6:105305755-105307118	chr6	+	105306454	105307127	True	NM_001004317,NM_020771	chr6,chr6	+,-	LIN28B,HACE1	97795,717
chr5:14868783-14870664	chr5	+	14869057	14870456	True	NM_138348,NM_054027	chr5,chr5	+,-	FAM105B,ANKH	-204325,1484
chr6:15018690-15019853	chr6	+	15018874	15019632	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	226894,643708
chr6:134158429-134158871	chr6	+	134158767	134158887	True	NR_027030,NM_145176	chr6,chr6	+,-	MGC34034,SLC2A12	-16534,214952
chrX:114523148-114524014	chrX	+	114523526	114524058	True	NM_016383,NM_020871	chrX,chrX	+,-	LUZP4,LRCH2	233,-54891
chr1:68916784-68917729	chr1	+	68916810	68917705	True	NM_000329,NM_001924	chr1,chr1	-,+	RPE65,GADD45A	-1168,-766001
chr1:19230101-19230867	chr1	+	19230286	19230905	True	NM_170726,NM_001135254,NM_003748	chr1,chr1,chr1	-,+,-	ALDH4A1,PAX7,ALDH4A1	-993,-272838,-993
chr7:27187643-27187878	chr7	+	27187649	27187908	True	NR_002795,NM_024014,NM_006896,NM_019102	chr7,chr7,chr7,chr7	+,-,-,-	HOXA11-AS1,HOXA6,HOXA7,HOXA5	37118,-281,8438,-4362
chr14:35406382-35407805	chr14	+	35406477	35407376	True	NR_002937,NM_182648	chr14,chr14	+,-	C14orf19,BAZ1A	1751,-61624
chr16:68015080-68015633	chr16	+	68015086	68015176	True	NM_022357,NM_001129758,NM_017803	chr16,chr16,chr16	-,-,+	DPEP3,DPEP3,DUS2L	-634,-634,42027
chr1:47069871-47070118	chr1	+	47069893	47070167	True	NM_198973,NM_001145474,NM_003684,NR_024174,NM_001135553,NR_024176	chr1,chr1,chr1,chr1,chr1,chr1	-,+,-,-,-,-	MKNK1,C1orf223,MKNK1,MKNK1,MKNK1,MKNK1	69,67332,69,69,69,69
chr3:150923600-150924724	chr3	+	150923632	150924291	True	NM_053002,NM_013308	chr3,chr3	+,-	MED12L,GPR171	-119008,-2644
chr4:6718516-6719713	chr4	+	6718534	6719527	True	NM_203462,NM_018366	chr4,chr4	-,+	MRFAP1L1,CNO	-6928,-743
chr16:4743297-4743596	chr16	+	4743338	4743586	True	NM_001193452,NM_032349,NM_133450	chr16,chr16,chr16	+,+,-	NUDT16L1,NUDT16L1,ANKS3	107,107,40627
chr3:172167011-172167419	chr3	+	172167038	172167332	True	NM_018098,NM_004122,NM_198407	chr3,chr3,chr3	+,-,-	ECT2,GHSR,GHSR	304965,-792,-792
chrX:21861112-21861952	chrX	+	21861301	21861853	True	NM_015884,NM_014332	chrX,chrX	+,-	MBTPS2,SMPX	-3696,-85071
chr8:50820933-50821337	chr8	+	50820932	50821175	True	NM_003068,NM_018967	chr8,chr8	-,+	SNAI2,SNTG1	-986933,3421
chr17:45331694-45332020	chr17	+	45331699	45332050	True	NM_000212,NM_001256	chr17,chr17	+,-	ITGB3,CDC27	-542,-65034
chr10:35437970-35439305	chr10	+	35437977	35439335	True	NM_001198777,NM_183012	chr10,chr10	-,+	CUL2,CREM	-58407,-11327
chrX:4455468-4457159	chrX	+	4455474	4457048	True	NR_034031,NM_004042	chrX,chrX	-,+	LOC389906,ARSF	-693539,-1470685
chr16:450899-451111	chr16	+	450907	451031	True	NM_020664,NM_021259,NM_005009	chr16,chr16,chr16	+,-,+	DECR2,TMEM8A,NME4	826,-18957,-3766
chr13:24463666-24463914	chr13	+	24463684	24463949	True	NM_001135816,NM_005932,NM_001014442,NM_001007537	chr13,chr13,chr13,chr13	+,-,+,-	PCOTH,MIPEP,PCOTH,C1QTNF9B	-143,-97,-707,7233
chr16:328815-329708	chr16	+	328863	329695	True	NM_006849,NM_183337,NM_001176,NM_003834	chr16,chr16,chr16,chr16	+,-,+,-	PDIA2,RGS11,ARHGDIG,RGS11	3422,-2949,910,-2949
chr12:120883459-120884074	chr12	+	120883462	120883886	True	NM_016399,NM_176818,NM_004373,NR_033684	chr12,chr12,chr12,chr12	-,+,+,+	TRIAP1,GATC,COX6A1,GATC	379,354,-7617,354
chr22:30165345-30167015	chr22	+	30165496	30167028	True	NM_001003692,NM_013387,NM_001003684,NM_019103	chr22,chr22,chr22,chr22	-,+,+,-	ZMAT5,UQCR10,UQCR10,ZMAT5	-2527,-2189,-2189,-2527
chr2:74742322-74742647	chr2	+	74742500	74742686	True	NM_016170,NM_032673	chr2,chr2	+,-	TLX2,PCGF1	-955,-7679
chr17:39040802-39041311	chr17	+	39040855	39041227	True	NM_019010,NM_001195386	chr17,chr17	-,+	KRT20,TMEM99	318,-65470
chr17:72521133-72522251	chr17	+	72521154	72522166	True	NM_152460,NM_174892,NM_007261	chr17,chr17,chr17	+,-,+	C17orf77,CD300LB,CD300A	58890,5497,-58683
chr1:173959948-173960591	chr1	+	173960032	173960631	True	NM_172071,NM_001122770	chr1,chr1	-,+	RC3H1,ZBTB37	1636,-122598
chr2:71455107-71456435	chr2	+	71455232	71456468	True	NM_005791,NM_020459	chr2,chr2	+,-	MPHOSPH10,PAIP2B	-97846,-999
chr10:127407945-127408201	chr10	+	127408090	127408250	True	NM_001202438,NM_015608,NR_033847	chr10,chr10,chr10	+,+,-	C10orf137,C10orf137,FLJ37035	-57,-57,-28
chr1:23753538-23754915	chr1	+	23753546	23754828	True	NR_033691,NM_003196	chr1,chr1	+,-	C1orf213,TCEA3	-57886,-2285
chr12:72664963-72665616	chr12	+	72664973	72665503	True	NR_026837,NR_026836,NM_013381	chr12,chr12,chr12	-,-,+	LOC283392,LOC283392,TRHDE	1836,1836,1025
chr8:42699762-42701308	chr8	+	42699934	42701344	True	NM_199003,NM_018105,NM_032410	chr8,chr8,chr8	-,-,+	THAP1,THAP1,HOOK3	-1460,-1460,50688
chr8:22463189-22464809	chr8	+	22463266	22464554	True	NM_001013842,NM_173686,NR_027715,NM_021174,NR_033902,NM_001198827	chr8,chr8,chr8,chr8,chr8,chr8	+,+,-,+,+,+	C8orf58,C8orf58,FLJ14107,KIAA1967,KIAA1967,C8orf58	-6203,-6203,35218,-778,-1172,-6203
chr21:30457790-30458434	chr21	+	30458044	30458428	True	NM_020152,NM_006585	chr21,chr21	+,-	C21orf7,CCT8	-5229,-12034
chr20:32718212-32719859	chr20	+	32718410	32719257	True	NM_001672,NM_003908	chr20,chr20	+,-	ASIP,EIF2S2	128913,-18325
chr1:78229223-78230454	chr1	+	78229450	78230323	True	NM_015017,NM_201626,NM_198549,NM_201624	chr1,chr1,chr1,chr1	-,-,+,-	USP33,USP33,FAM73A,USP33	-3913,-3913,14985,-3913
chr19:2720231-2720629	chr19	+	2720240	2720384	True	NM_145173,NM_003249	chr19,chr19	-,+	DIRAS1,THOP1	1056,65121
chr8:67838306-67838734	chr8	+	67838405	67838636	True	NR_002598,NR_002599,NM_001136160	chr8,chr8,chr8	-,-,+	SNORD87,SNHG6,C8orf45	-3621,-628,-54730
chr15:40651000-40652398	chr15	+	40651025	40651972	True	NM_207380,NM_001145643,NM_033510	chr15,chr15,chr15	-,+,+	C15orf52,PHGR1,DISP2	-17857,-7842,-642
chr10:49368431-49369207	chr10	+	49368440	49369249	True	NR_033172,NM_002750	chr10,chr10	-,+	FRMPD2P1,MAPK8	14041,240437
chr10:49368431-49369207	chr10	+	46660974	46661783	False	NR_027632,NM_015605	chr10,chr10	+,-	FAM35B,PTPN20B	235857,-19971
chr10:49368431-49369207	chr10	+	48847875	48848684	False	NR_033172,NM_153034	chr10,chr10	-,+	FRMPD2P1,ZNF488	14054,-492838
chr17:62489760-62490954	chr17	+	62490172	62490949	True	NM_138363,NM_007215	chr17,chr17	+,-	CCDC45,POLG2	12208,2288
chr8:22018547-22019380	chr8	+	22018599	22019407	True	NM_139278,NM_001199,NM_001172357,NR_033403,NR_033404,NM_001172410,NM_006129,NM_003018	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,+,+,+,+,+,+,+	LGI3,BMP1,SFTPC,BMP1,BMP1,SFTPC,BMP1,SFTPC	-4255,3245,82,3245,3245,82,3245,82
chr16:19124601-19125149	chr16	+	19124839	19125127	True	NM_001034841,NM_015092,NR_028028	chr16,chr16,chr16	+,-,+	ITPRIPL2,SMG1,ITPRIPL2	126,-187113,126
chr3:132758857-132759206	chr3	+	132758912	132759011	True	NM_153240,NM_023943,NM_001136469	chr3,chr3,chr3	-,+,+	NPHP3,TMEM108,TMEM108	-317609,-1803,-1803
chr2:1747335-1747664	chr2	+	1747494	1747702	True	NM_012293,NM_175722	chr2,chr2	-,+	PXDN,TPO	639,-329365
chr5:34190533-34190805	chr5	+	34190709	34190853	True	NM_016568,NR_037951	chr5,chr5	+,-	RXFP3,C1QTNF3-AMACR	-254269,-66076
chr5:34190533-34190805	chr5	-	21483613	21483671	False	NR_027026,NM_004061	chr5,chr5	+,-	GUSBP1,CDH12	-24075,1370110
chr6:6679670-6680089	chr6	+	6679704	6680138	True	NM_004271,NR_026970	chr6,chr6	+,-	LY86,LY86-AS1	-90821,-56645
chr11:85749544-85750968	chr11	+	85750200	85750780	True	NM_001008660,NM_173556	chr11,chr11	-,+	PICALM,CCDC83	29386,-184120
chr3:128370051-128370455	chr3	+	128370169	128370412	True	NM_004637,NM_002950	chr3,chr3	+,-	RAB7A,RPN1	74566,-450
chr5:179230738-179231421	chr5	+	179230770	179231364	True	NR_031598,NM_054013,NM_145867,NM_001142299,NM_001142298,NM_014275	chr5,chr5,chr5,chr5,chr5,chr5	-,-,+,+,+,-	MIR1229,MGAT4B,LTC4S,SQSTM1,SQSTM1,MGAT4B	-5424,-895,-9835,2638,2023,2638
chr12:4647895-4648205	chr12	+	4647955	4648117	True	NM_006479,NM_020374,NM_001130862	chr12,chr12,chr12	+,-,+	RAD51AP1,C12orf4,RAD51AP1	-56,-318,-56
chr4:21647909-21649587	chr4	+	21647940	21649402	True	NM_001035003,NM_145048	chr4,chr4	-,+	KCNIP4,PACRGL	49967,-945963
chr15:59396948-59397184	chr15	+	59397001	59397121	True	NM_004701,NR_031750	chr15,chr15	+,-	CCNB2,MIR2116	198,66390
chr4:132364580-132364946	chr4	+	132364747	132364839	True	NM_144643,NM_020815	chr4,chr4	-,+	SCLT1,PCDH10	-2349983,1705630
chr16:85045843-85046365	chr16	+	85046085	85046217	True	NM_017740,NM_001145548,NM_014732	chr16,chr16,chr16	-,-,+	ZDHHC7,ZDHHC7,KIAA0513	-944,-944,15192
chr16:15490544-15490781	chr16	+	15490594	15490776	True	NM_001128423,NR_037466,NM_173803	chr16,chr16,chr16	+,-,+	MPV17L,MIR3180-4,MPV17L	-1034,-241735,-1034
chr16:15490544-15490781	chr16	-	28633871	28633921	False	NM_001199142,NM_177536	chr16,chr16	+,-	EIF3C,SULT1A1	65957,995
chr4:177135873-177137592	chr4	+	177135968	177137437	True	NM_144644,NM_021928	chr4,chr4	-,+	SPATA4,SPCS3	-19146,103652
chr18:39094665-39096397	chr18	+	39094770	39096225	True	NM_002647,NR_002838	chr18,chr18	+,-	PIK3C3,KC6	438973,4386
chr22:31605297-31606967	chr22	+	31605630	31606894	True	NR_037496,NM_005569	chr22,chr22	-,+	MIR3928,LIMK2	-49525,1355
chr11:130785953-130786192	chr11	+	130785960	130786240	True	NM_001048209,NM_014758	chr11,chr11	+,-	NTM,SNX19	454130,192
chr19:50921098-50921377	chr19	+	50921108	50921294	True	NM_003121,NM_004851	chr19,chr19	+,-	SPIB,NAPSA	900,-52177
chr3:51998385-51998827	chr3	+	51998446	51998778	True	NM_080865,NM_001174100,NM_001146314,NM_033010,NR_027476,NM_033008,NM_032750,NM_020418	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,-,-,-,-,-,-,-	GPR62,PCBP4,ABHD14B,PCBP4,ABHD14B,PCBP4,ABHD14B,PCBP4	-9167,2754,9918,-1538,9918,2754,9918,2722
chr3:48263648-48263881	chr3	+	48263647	48263721	True	NM_004345,NM_201567	chr3,chr3	+,-	CAMP,CDC25A	1140,-33846
chr16:30104147-30104674	chr16	+	30104240	30104583	True	NM_002720,NM_004608,NM_001145524,NM_031477	chr16,chr16,chr16,chr16	+,-,-,-	PPP4C,TBX6,YPEL3,YPEL3	-16908,-1035,3004,2988
chr5:74997973-74999172	chr5	+	74998217	74999144	True	NM_152408,NM_016218	chr5,chr5	-,+	POC5,POLK	9194,-190611
chr5:80528524-80528734	chr5	+	80528554	80528698	True	NM_001099736,NM_001099735,NM_001825,NR_034121	chr5,chr5,chr5,chr5	+,+,+,-	CKMT2,CKMT2,CKMT2,LOC100131067	440,440,440,68740
chr12:53010653-53011013	chr12	+	53010655	53010957	True	NM_002284,NM_175068	chr12,chr12	+,-	KRT86,KRT73	-315057,1436
chrX:15802304-15804034	chrX	+	15802415	15803848	True	NR_002725,NM_005089	chrX,chrX	-,+	INE2,ZRSR2	1924,4725
chr17:73975912-73976137	chr17	+	73975965	73976139	True	NM_001113324,NM_001185039,NM_007292,NR_037709,NM_004035	chr17,chr17,chr17,chr17,chr17	+,-,-,+,-	C17orf106,ACOX1,ACOX1,C17orf106-CDK3,ACOX1	-718,-450,-450,-718,-450
chr4:94748369-94748577	chr4	+	94748369	94748541	True	NM_005172,NM_014485	chr4,chr4	+,-	ATOH1,HPGDS	1536,515536
chr15:75017971-75018344	chr15	+	75018030	75018278	True	NM_000499,NM_000761	chr15,chr15	-,+	CYP1A1,CYP1A2	-153,22905
chr17:30439662-30439932	chr17	+	30439679	30439782	True	NM_001033566,NR_002222	chr17,chr17	+,-	RHOT1,ARGFXP2	29690,38867
chr12:120967211-120968883	chr12	+	120967219	120968534	True	NM_014868,NM_032314	chr12,chr12	+,-	RNF10,COQ5	3597,-255
chr19:35490876-35491089	chr19	+	35490975	35491047	True	NM_175872,NM_001136199,NM_020895	chr19,chr19,chr19	-,+,+	ZNF792,GRAMD1A,GRAMD1A	-36022,198,198
chr14:75387397-75387968	chr14	+	75387443	75388017	True	NM_031464,NR_033814	chr14,chr14	-,+	RPS6KL1,DLST	1178,-38903
chrX:154024700-154026114	chrX	+	154024818	154026130	True	NM_001166462,NR_002984,NM_001166460,NM_001166461,NM_002436	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	MPP1,SNORA56,MPP1,MPP1,MPP1	7730,-21604,7730,7730,7730
chr6:149888699-149890465	chr6	+	149888873	149889822	True	NM_139126,NM_138785	chr6,chr6	-,+	PPIL4,C6orf72	-21702,-1396
chr9:27509881-27511429	chr9	+	27510286	27511468	True	NM_024761,NM_020124	chr9,chr9	-,+	MOBKL2B,IFNK	18433,12843
chr1:100627925-100629348	chr1	+	100628565	100629354	True	NM_144620,NM_019083	chr1,chr1	-,+	LRRC39,CCDC76	14468,-29917
chr16:3492597-3493334	chr16	+	3492748	3493266	True	NM_001083601,NM_152457	chr16,chr16	+,-	NAT15,ZNF597	401,274
chr20:57876811-57877845	chr20	+	57877192	57877886	True	NR_037930,NM_207033,NM_207032,NM_000114,NM_207034	chr20,chr20,chr20,chr20,chr20	-,+,+,+,+	SLMO2-ATP5E,EDN3,EDN3,EDN3,EDN3	-259291,-1744,-1744,-1744,-1744
chr5:443601-444141	chr5	+	443875	444087	True	NM_007277,NM_138464	chr5,chr5	+,-	EXOC3,C5orf55	-592,-617
chr11:60526030-60527428	chr11	+	60526032	60527448	True	NM_152717,NM_001098835,NM_004778	chr11,chr11,chr11	+,+,-	MS4A15,MS4A15,GPR44	-1750,-1750,96046
chr5:137513538-137513959	chr5	+	137513580	137513997	True	NM_005733,NM_139199,NM_001164326,NM_006696	chr5,chr5,chr5,chr5	+,-,-,-	KIF20A,BRD8,BRD8,BRD8	419,411,411,411
chr16:764017-764260	chr16	+	764134	764306	True	NM_153350,NM_024042,NM_023933	chr16,chr16,chr16	-,+,+	FBXL16,METRN,FAM173A	-8309,866,6851
chr4:40516981-40517936	chr4	+	40516981	40517957	True	NM_019027,NM_017581	chr4,chr4	-,+	RBM47,CHRNA9	83,-179563
chr19:46998348-46998640	chr19	+	46998473	46998589	True	NM_005184,NM_020709	chr19,chr19	+,-	CALM3,PNMAL2	105922,630
chr17:78152838-78154039	chr17	+	78152965	78154085	True	NM_052819,NM_024110,NM_014740	chr17,chr17,chr17	+,+,-	CARD14,CARD14,EIF4A3	7513,-735,-31983
chr6:73971724-73972617	chr6	+	73971810	73972610	True	NM_001017361,NM_030568	chr6,chr6	+,-	C6orf221,KHDC1	99789,347
chr11:94131650-94133036	chr11	+	94131816	94133018	True	NM_017704,NM_001199206,NM_016540	chr11,chr11,chr11	+,+,-	ANKRD49,FOLR4,GPR83	94134,-93064,1617
chr11:13985237-13985472	chr11	+	13985302	13985368	True	NM_006108,NM_001177315	chr11,chr11	+,-	SPON1,RRAS2	-1439,394713
chr19:47423680-47423992	chr19	+	47423694	47424012	True	NM_021575,NM_004491	chr19,chr19	-,+	AP2S1,GRLF1	-69491,-1820
chr3:33841971-33842720	chr3	+	33842044	33842728	True	NM_001162429,NR_027868,NM_013374,NM_015097	chr3,chr3,chr3,chr3	+,+,+,-	PDCD6IP,PDCD6IP,PDCD6IP,CLASP2	-2042,-2042,-2042,-82196
chr12:57827786-57829239	chr12	+	57828035	57829211	True	NM_005538,NM_001080156	chr12,chr12	+,-	INHBC,ARHGAP9	48,42567
chr9:95056872-95057656	chr9	+	95056891	95057693	True	NR_003704,NM_013417,NR_037424,NM_002161,NM_001012267	chr9,chr9,chr9,chr9,chr9	-,-,-,-,+	SNORA84,IARS,MIR3651,IARS,CENPP	-2016,-919,-2062,-853,30047
chr9:67684298-67685376	chr9	+	67684303	67685209	True	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	109030,241551
chr9:67684298-67685376	chr9	+	44763199	44763249	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	226986,-1132469
chr9:67684298-67685376	chr9	-	45107027	45107799	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-116842,-1476297
chr9:67684298-67685376	chr9	+	46275520	46276292	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2644790,411273
chr9:67684298-67685376	chr9	-	47164249	47165021	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-3533519,-476734
chr4:5893363-5893572	chr4	+	5893397	5893567	True	NM_001313,NM_153717,NM_001014809	chr4,chr4,chr4	-,+,-	CRMP1,EVC,CRMP1	-3082,-180524,1268
chr6:74406815-74407160	chr6	+	74406817	74407071	True	NM_001159587,NM_012434,NM_133493,NM_001159588	chr6,chr6,chr6,chr6	+,-,+,+	CD109,SLC17A5,CD109,CD109	-1360,-43080,-1354,-1360
chr7:148825558-148827184	chr7	+	148825674	148826823	True	NM_001001661,NM_020781	chr7,chr7	-,+	ZNF425,ZNF398	-2236,-2226
chr3:156393604-156393888	chr3	+	156393713	156393933	True	NM_001184718,NM_015508,NM_001184717,NR_027954	chr3,chr3,chr3,chr3	+,+,+,-	TIPARP,TIPARP,TIPARP,LOC100287227	519,-1562,-1052,-211
chr7:148682728-148684597	chr7	+	148683179	148684550	True	NM_004911,NM_020781	chr7,chr7	-,+	PDIA4,ZNF398	41284,138957
chr9:136148760-136149315	chr9	+	136148896	136149262	True	NM_000972,NM_020469	chr9,chr9	+,-	RPL7A,ABO	65806,1428
chr7:92861607-92861945	chr7	+	92861646	92861880	True	NM_024553,NM_017667,NM_001039372	chr7,chr7,chr7	+,+,-	CCDC132,CCDC132,HEPACAM2	-44,-44,-5864
chr17:18086498-18086719	chr17	+	18086522	18086735	True	NM_002018,NM_017758	chr17,chr17	-,+	FLII,ALKBH5	75370,131
chr2:170581298-170581742	chr2	+	170581430	170581568	True	NM_001085447,NM_144711	chr2,chr2	-,+	C2orf77,KLHL23	-30499,8787
chr6:97379230-97380533	chr6	+	97379269	97380405	True	NM_014165,NM_052904	chr6,chr6	-,+	NDUFAF4,KLHL32	-33502,-6824
chr4:90758921-90759201	chr4	+	90759039	90759221	True	NM_001146055,NM_000345,NM_007351,NM_007308,NM_001146054	chr4,chr4,chr4,chr4,chr4	-,-,+,-,-	SNCA,SNCA,MMRN1,SNCA,SNCA	276,-689,56830,-912,-912
chr20:41817282-41817825	chr20	+	41817283	41817809	True	NM_133170,NM_007050,NM_006275	chr20,chr20,chr20	-,-,+	PTPRT,PTPRT,SRSF6	798,798,268694
chr7:73151136-73151527	chr7	+	73151233	73151419	True	NM_148912,NM_148913,NR_026910,NR_026912,NR_026690,NM_001145364	chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,+,-	ABHD11,ABHD11,ABHD11,ABHD11,WBSCR26,ABHD11	1815,1815,1815,1821,-1885,1815
chr2:242496934-242497881	chr2	+	242497037	242497895	True	NM_032515,NR_033346	chr2,chr2	+,-	BOK,BOK-AS1	296,713
chr15:63450010-63450643	chr15	+	63450096	63450688	True	NM_016530,NM_015920	chr15,chr15	+,-	RAB8B,RPS27L	31039,-355
chr2:204734882-204735405	chr2	+	204734882	204735422	True	NM_203365,NM_005214,NM_001037631	chr2,chr2,chr2	-,+,+	RAPH1,CTLA4,CTLA4	-334824,-2440,-2440
chr19:17862464-17862686	chr19	+	17862477	17862721	True	NM_001161359,NM_001161358,NM_001080421,NM_015122,NM_001161357	chr19,chr19,chr19,chr19,chr19	+,+,-,+,+	FCHO1,FCHO1,UNC13A,FCHO1,FCHO1	-242,-4001,-63469,-242,-4001
chr11:63328486-63329039	chr11	+	63328523	63328801	True	NM_017878,NM_004585	chr11,chr11	-,+	HRASLS2,RARRES3	2104,-24301
chr10:8097290-8097581	chr10	+	8097339	8097626	True	NR_024255,NM_002051,NR_024256,NM_001002295	chr10,chr10,chr10,chr10	-,+,-,+	FLJ45983,GATA3,FLJ45983,GATA3	-1892,-723,-1892,-723
chr18:21165473-21165796	chr18	+	21165476	21165816	True	NM_013326,NM_000271	chr18,chr18	+,-	C18orf8,NPC1	-82065,815
chr2:149895875-149896885	chr2	+	149896129	149896640	True	NM_015702,NM_177964	chr2,chr2	-,+	MMADHC,LYPD6B	547741,-1212
chr20:25063506-25063906	chr20	+	25063521	25063873	True	NM_014588,NM_001114089,NM_199425	chr20,chr20,chr20	-,+,-	VSX1,ENTPD6,VSX1	-754,112465,-754
chr7:6524103-6524595	chr7	+	6524117	6524603	True	NM_006854,NM_001134387,NM_001100603	chr7,chr7,chr7	-,+,-	KDELR2,ZDHHC4,KDELR2	-268,92461,-268
chr12:52845814-52847777	chr12	+	52845921	52847610	True	NM_002284,NM_005555	chr12,chr12	+,-	KRT86,KRT6B	-150323,-11
chr3:183872259-183872508	chr3	+	183872258	183872320	True	NM_005787,NM_004423	chr3,chr3	-,+	ALG3,DVL3	94489,963
chr8:104382181-104382909	chr8	+	104382228	104382714	True	NM_138455,NM_030780	chr8,chr8	+,-	CTHRC1,SLC25A32	1071,44804
chr7:102073150-102073608	chr7	+	102073248	102073342	True	NM_017621,NM_032831,NM_001126340	chr7,chr7,chr7	-,+,+	ALKBH4,ORAI2,ORAI2	32029,653,653
chr16:48180662-48181949	chr16	+	48181064	48181806	True	NM_033226,NM_031490	chr16,chr16	-,+	ABCC12,LONP2	-383,96404
chr19:31637217-31637926	chr19	+	31637382	31637922	True	NM_020856,NR_026894	chr19,chr19	-,+	TSHZ3,DKFZp566F0947	202318,2860
chr4:967337-967601	chr4	+	967567	967649	True	NM_000203,NM_001347	chr4,chr4	+,-	IDUA,DGKQ	13135,-223
chr19:41935151-41935881	chr19	+	41935170	41935462	True	NM_198540,NM_001130514	chr19,chr19	-,+	B3GNT8,C19orf69	-535,13600
chr15:80446449-80447256	chr15	+	80446500	80447278	True	NM_000137,NM_004049	chr15,chr15	+,-	FAH,BCL2A1	-1211,-182857
chr15:44171829-44173582	chr15	+	44171961	44173387	True	NM_024908,NR_003571	chr15,chr15	+,-	WDR76,LOC728758	-52900,-1592
chrX:49119935-49120377	chrX	+	49119934	49120374	True	NM_001114377,NM_033215,NM_001184745,NM_014009	chrX,chrX,chrX,chrX	-,+,+,-	FOXP3,PPP1R3F,PPP1R3F,FOXP3	964,5931,5931,964
chr16:30908231-30908463	chr16	+	30908337	30908435	True	NM_001330,NM_004765,NR_031576,NM_001142544	chr16,chr16,chr16,chr16	+,-,+,+	CTF1,BCL7C,MIR762,CTF1	-460,-2938,-3164,-460
chr1:36862619-36863017	chr1	+	36862746	36863052	True	NM_032881,NM_024676	chr1,chr1	-,+	LSM10,SH3D21	491,-90095
chr3:46717850-46718164	chr3	+	46717869	46718029	True	NM_182775,NM_147196	chr3,chr3	-,+	ALS2CL,TMIE	920,24793
chr10:72576934-72577229	chr10	+	72577062	72577155	True	NM_003901,NM_152710	chr10,chr10	+,-	SGPL1,C10orf27	-1409,-31905
chrX:132093486-132094296	chrX	+	132093630	132094162	True	NM_001077188,NM_001042452,NM_147175	chrX,chrX,chrX	-,+,-	HS6ST2,MST4,HS6ST2	1311,-936045,1311
chr1:231473808-231474019	chr1	+	231473812	231474028	True	NM_032018,NM_175876,NM_001010984	chr1,chr1,chr1	+,-,+	C1orf124,EXOC8,C1orf124	-181,-234,-181
chr19:43026219-43026804	chr19	+	43026223	43026369	True	NM_001410,NM_001184816,NM_001184815,NM_001184813,NM_001024912,NM_001712	chr19,chr19,chr19,chr19,chr19,chr19	+,-,-,-,-,-	MEGF8,CEACAM1,CEACAM1,CEACAM1,CEACAM1,CEACAM1	-196513,6342,6342,6342,6342,6342
chr16:89787648-89787871	chr16	+	89787669	89787825	True	NM_001113525,NR_036480,NM_152287,NM_004913	chr16,chr16,chr16,chr16	+,+,+,-	ZNF276,LOC100128881,ZNF276,C16orf7	126,-9456,-327,-275
chr19:10656463-10657578	chr19	+	10656907	10657536	True	NM_023008,NR_031603,NM_032885	chr19,chr19,chr19	-,+,+	KRI1,MIR1238,ATG4D	19216,5261,-2311
chr16:20816669-20817168	chr16	+	20816755	20817206	True	NM_080663,NM_001142725,NM_030941,NM_001199053,NM_001144924	chr16,chr16,chr16,chr16,chr16	-,-,+,+,+	ERI2,ERI2,LOC81691,LOC81691,LOC81691	639,639,560,560,560
chr20:48099481-48099756	chr20	+	48099497	48099557	True	NM_004975,NR_003030	chr20,chr20	-,+	KCNB1,SNORD12	-316,-202328
chr3:49443163-49444797	chr3	+	49443400	49444547	True	NM_001664,NM_022171	chr3,chr3	-,+	RHOA,TCTA	5030,5091
chr15:62457062-62457551	chr15	+	62457094	62457555	True	NM_001007595,NM_207322	chr15,chr15	-,+	C2CD4B,C2CD4A	-23,-97969
chr9:134307266-134308049	chr9	+	134307467	134308041	True	NM_001135954,NM_013318	chr9,chr9	-,+	UCK1,PRRC2B	98671,-2048
chr10:92681985-92682355	chr10	+	92681984	92682376	True	NM_001104546,NM_014391	chr10,chr10	+,-	RPP30,ANKRD1	-50329,-952
chr4:186297741-186298391	chr4	+	186297877	186298387	True	NM_181726,NM_018409	chr4,chr4	+,-	ANKRD37,LRP2BP	19452,1815
chr11:66047121-66047849	chr11	+	66047586	66047848	True	NM_020470,NM_182553	chr11,chr11	-,+	YIF1A,CNIH2	8840,-1941
chr1:54359130-54359776	chr1	+	54359514	54359771	True	NM_000792,NM_213593,NR_036640,NM_018982,NR_036639,NM_001039716,NM_001039715	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,-,-,+,+	DIO1,DIO1,YIPF1,YIPF1,YIPF1,DIO1,DIO1	89,89,-4027,-4027,-4027,89,89
chr5:175110376-175110580	chr5	+	175110380	175110614	True	NM_022304,NM_000794	chr5,chr5	+,-	HRH2,DRD1	-1967,-239217
chr17:18908589-18908833	chr17	+	18908588	18908802	True	NM_001039999,NM_152351	chr17,chr17	-,+	FAM83G,SLC5A10	-528,-53161
chr19:39907504-39907999	chr19	+	39907583	39907647	True	NM_001020,NM_022835	chr19,chr19	-,+	RPS16,PLEKHG2	19021,-3884
chr19:3096179-3096510	chr19	+	3096231	3096551	True	NM_002067,NM_198969	chr19,chr19	+,-	GNA11,AES	-1875,-33267
chr17:65713367-65713833	chr17	+	65713401	65713821	True	NM_015462,NM_181655	chr17,chr17	+,-	NOL11,C17orf58	239,275994
chr11:47612435-47612721	chr11	+	47612464	47612564	True	NM_001164379,NM_031909	chr11,chr11	+,-	FAM180B,C1QTNF4	-4288,3447
chr11:66887757-66887961	chr11	+	66887779	66887982	True	NM_012308,NM_001040716,NR_027473	chr11,chr11,chr11	+,-,+	KDM2A,PC,KDM2A	-1090,-161932,-1090
chr13:25088600-25088950	chr13	+	25088623	25088833	True	NM_006437,NR_002815	chr13,chr13	-,+	PARP4,LOC374491	-1675,65512
chr1:85041510-85042060	chr1	+	85041783	85041857	True	NM_004388,NR_036561	chr1,chr1	-,+	CTBS,SPATA1	-1620,-69867
chr2:24162902-24163187	chr2	+	24163009	24163161	True	NM_181713,NM_017552	chr2,chr2	+,-	UBXN2A,ATAD2B	214,-13075
chr3:25706909-25708233	chr3	+	25707066	25707945	True	NM_001068,NM_001145391	chr3,chr3	-,+	TOP2B,OXSM	-1278,123617
chr19:4770825-4771150	chr19	+	4770909	4771126	True	NR_029607,NR_027148,NM_139159	chr19,chr19,chr19	+,+,-	MIR7-3,C19orf30,DPP9	-278,-1843,-47054
chr10:30980064-30980858	chr10	+	30980083	30980775	True	NM_183058,NM_005204	chr10,chr10	-,+	LYZL2,MAP3K8	-61436,-257268
chr13:22033704-22034633	chr13	+	22033801	22034679	True	NM_153251,NM_002010	chr13,chr13	-,+	ZDHHC20,FGF9	-293,210535
chr17:41179221-41180501	chr17	+	41179255	41180441	True	NM_005440,NM_006373	chr17,chr17	+,-	RND2,VAT1	-2048,-4796
chr21:34091631-34092471	chr21	+	34091631	34092123	True	NM_003895,NM_203446,NM_001160306,NR_024622,NM_001160302	chr21,chr21,chr21,chr21,chr21	-,-,-,+,-	SYNJ1,SYNJ1,SYNJ1,C21orf49,SYNJ1	8291,8291,8190,52287,8190
chr21:39492674-39493310	chr21	+	39493000	39493226	True	NR_026842,NR_026839,NR_026840,NR_026841,NR_026838,NM_005867	chr21,chr21,chr21,chr21,chr21,chr21	+,+,+,+,+,-	DSCR8,DSCR8,DSCR8,DSCR8,DSCR8,DSCR4	318,318,318,318,318,278
chr12:56050083-56050306	chr12	+	56050102	56050320	True	NM_001144996,NM_206899	chr12,chr12	-,+	ITGA7,OR10P1	51416,-19481
chr11:368212-368438	chr11	+	368212	368404	True	NM_178537,NM_001135054	chr11,chr11	+,-	B4GALNT4,SIGIRR	1390,46645
chr12:119772499-119772777	chr12	+	119772556	119772808	True	NR_024246,NM_178499	chr12,chr12	-,+	LOC144742,CCDC60	-31371,-90
chr1:211571443-211572140	chr1	+	211571776	211571843	True	NM_001164688,NR_026761	chr1,chr1	-,+	RD3,C1orf97	94471,-15730
chr9:34694623-34696407	chr9	+	34694818	34696107	True	NM_004512,NM_006274	chr9,chr9	+,-	IL11RA,CCL19	-40945,-3544
chr7:65540165-65540472	chr7	+	65540319	65540497	True	NM_000181,NM_001024943,NM_001024944,NM_001024946,NM_000048	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	GUSB,ASL,ASL,ASL,ASL	-93018,336,336,336,278
chr17:901919-902753	chr17	+	901930	902702	True	NM_013337,NM_022463	chr17,chr17	+,-	TIMM22,NXN	-1624,-18920
chr17:28259769-28260694	chr17	+	28259800	28260699	True	NM_198529,NM_033389,NR_026738,NM_001145053	chr17,chr17,chr17,chr17	+,-,+,+	EFCAB5,SSH2,EFCAB5,EFCAB5	7923,-2782,7923,-2986
chr17:18164823-18165098	chr17	+	18164827	18165147	True	NM_001144900,NM_002018,NM_148886,NM_139162	chr17,chr17,chr17,chr17	+,-,+,+	SMCR7,FLII,SMCR7,SMCR7	-1030,-2772,-454,-1030
chr17:37607687-37607902	chr17	+	37607733	37607801	True	NM_004774,NM_016507,NM_015083	chr17,chr17,chr17	-,+,+	MED1,CDK12,CDK12	-206,9937,9937
chr13:45009408-45009733	chr13	+	45009508	45009654	True	NM_001010897,NM_006022	chr13,chr13	+,-	SERP2,TSC22D1	-61581,1375
chr15:65135724-65136414	chr15	+	65135726	65136332	True	NM_001195059,NM_025049,NM_025201	chr15,chr15,chr15	+,-,+	PLEKHO2,PIF1,PLEKHO2	-1695,-17888,-1695
chr3:119186309-119186778	chr3	+	119186540	119186623	True	NM_018266,NM_152305,NR_024265	chr3,chr3,chr3	-,+,+	TMEM39A,POGLUT1,POGLUT1	-4069,1161,1161
chr17:61933363-61934044	chr17	+	61933384	61934092	True	NM_001098426,NR_002947	chr17,chr17	-,+	SMARCD2,TCAM1P	-13033,283
chr19:46476126-46476337	chr19	+	46476189	46476359	True	NM_002516,NM_001080402	chr19,chr19	-,+	NOVA2,CCDC61	348,21979
chr17:40687620-40688099	chr17	+	40687643	40688069	True	NM_000263,NM_013290	chr17,chr17	+,-	NAGLU,PSMC3IP	52,41728
chr20:61298696-61300289	chr20	+	61298875	61300101	True	NM_016354,NR_024470	chr20,chr20	+,-	SLCO4A1,LOC100127888	-25129,-902
chr1:67218536-67220295	chr1	+	67218706	67220302	True	NM_005478,NM_152665	chr1,chr1	-,+	INSL5,TCTEX1D1	46696,-617
chr7:20378292-20379505	chr7	+	20378302	20379376	True	NM_182762,NM_002214	chr7,chr7	-,+	MACC1,ITGB8	-121289,-7629
chr9:34046752-34048342	chr9	+	34046866	34048280	True	NM_018449,NR_003690	chr9,chr9	-,+	UBAP2,SNORD121B	717,-112631
chr9:136397738-136398250	chr9	+	136397819	136398282	True	NM_014694,NM_001080483,NM_001145320	chr9,chr9,chr9	+,-,+	ADAMTSL2,TMEM8C,ADAMTSL2	1692,-7751,-584
chr17:80692802-80693066	chr17	+	80692901	80693057	True	NM_022158,NM_006822	chr17,chr17	+,-	FN3K,RAB40B	394,-36303
chr6:101847630-101849077	chr6	+	101847767	101849122	True	NM_022091,NM_001166247,NM_021956,NM_175768	chr6,chr6,chr6,chr6	-,+,+,+	ASCC3,GRIK2,GRIK2,GRIK2	-518543,-957,-957,-957
chr1:169453548-169454757	chr1	+	169453562	169454639	True	NM_003666,NM_006996	chr1,chr1	+,-	BLZF1,SLC19A2	-116420,619
chr10:27444617-27445024	chr10	+	27444836	27444938	True	NM_032844,NM_014263,NM_001172304,NM_001172303,NM_139312	chr10,chr10,chr10,chr10,chr10	+,-,+,+,-	MASTL,YME1L1,MASTL,MASTL,YME1L1	-1134,-1515,-1134,-1134,-1515
chr19:3361383-3361741	chr19	+	3361424	3361764	True	NM_005597,NM_001136503,NM_205843	chr19,chr19,chr19	+,-,+	NFIC,C19orf77,NFIC	4808,118826,-1859
chr17:4937147-4937563	chr17	+	4937151	4937445	True	NM_006612,NM_001104577,NM_017986	chr17,chr17,chr17	+,-,-	KIF1C,GPR172B,GPR172B	-35959,1332,1332
chr17:79212908-79213108	chr17	+	79212914	79213140	True	NM_144679,NM_001086521	chr17,chr17	-,+	C17orf56,C17orf89	-23,4
chr3:183977995-183978505	chr3	+	183977994	183978554	True	NM_033259,NM_014693	chr3,chr3	-,+	CAMK2N2,ECE2	747,-10600
chr1:166964947-166965323	chr1	+	166964971	166965349	True	NM_199351,NM_032858	chr1,chr1	-,+	ILDR2,MAEL	-20410,-6513
chr17:43591035-43591440	chr17	+	43591034	43591364	True	NR_002940,NR_037772	chr17,chr17	-,+	LRRC37A4,CRHR1	6575,106345
chr17:43591035-43591440	chr17	+	43595027	43595357	False	NR_002940,NR_037772	chr17,chr17	-,+	LRRC37A4,CRHR1	2582,102352
chr17:43591035-43591440	chr17	-	45127948	45128268	False	NM_203400,NM_054022	chr17,chr17	-,+	RPRML,GOSR2	-71334,-127513
chr16:30674208-30675114	chr16	+	30674311	30675052	True	NM_138447,NM_001105079	chr16,chr16	-,+	ZNF689,FBRS	-52629,725
chr21:26976923-26978813	chr21	+	26976956	26978791	True	NM_017446,NR_030784,NM_080794	chr21,chr21,chr21	-,+,-	MRPL39,MIR155,MRPL39	1068,-30722,1068
chr11:86664950-86666027	chr11	+	86664954	86665980	True	NM_012193,NM_001168724	chr11,chr11	-,+	FZD4,TMEM135	503,82905
chr6:110500914-110501818	chr6	+	110500995	110501808	True	NM_001024935,NM_001024934,NM_001024936,NM_003931,NM_015891	chr6,chr6,chr6,chr6,chr6	-,-,-,-,+	WASF1,WASF1,WASF1,WASF1,CDC40	-163,-163,-163,-163,21
chr5:173117343-173117845	chr5	+	173117348	173117808	True	NR_027109,NM_138369	chr5,chr5	+,-	LOC285593,BOD1	-110742,-73682
chr6:161125751-161126735	chr6	+	161125877	161126765	True	NM_000301,NM_001168338,NM_005577	chr6,chr6,chr6	+,+,-	PLG,PLG,LPA	-2703,-2703,-38470
chr9:35657701-35657934	chr9	+	35657769	35657939	True	NM_032818,NM_014450,NM_001195201,NM_001195200,NR_003051,NM_001195217,NM_174923	chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,-,+,+,-,+,+	C9orf100,SIT1,CCDC107,CCDC107,RMRP,CCDC107,CCDC107	7389,-6822,347,347,126,347,347
chr10:6430332-6430890	chr10	+	6430425	6430816	True	NM_004566,NM_006257	chr10,chr10	+,-	PFKFB3,PRKCQ	-185636,191473
chrX:78623018-78624516	chrX	+	78623402	78624498	True	NM_001171581,NM_004867,NM_032553	chrX,chrX,chrX	-,-,+	ITM2A,ITM2A,GPR174	-353,-353,-196985
chr11:62358206-62358848	chr11	+	62358377	62358845	True	NM_022830,NM_000327	chr11,chr11	-,+	TUT1,ROM1	314,21367
chr4:39032394-39033425	chr4	+	39032484	39033141	True	NM_024943,NM_001007075	chr4,chr4	-,+	TMEM156,KLHL5	955,13309
chr19:43893659-43893879	chr19	+	43893788	43893866	True	NM_031451,NM_014400	chr19,chr19	+,-	TEX101,LYPD3	-1076,76015
chr9:118496-119527	chr9	+	118564	118640	True	NM_203447,NM_207305	chr9,chr9	+,-	DOCK8,FOXD4	96224,-147
chr1:183387201-183387491	chr1	+	183387308	183387420	True	NM_001174061,NM_015039	chr1,chr1	+,-	SMG7,NMNAT2	54085,264
chr1:225635148-225636303	chr1	+	225635282	225636282	True	NM_194442,NM_001130440	chr1,chr1	-,+	LBR,SRP9	-18725,329232
chr6:71375877-71376647	chr6	+	71376027	71376665	True	NM_080742,NM_001044305,NM_021940	chr6,chr6,chr6	-,+,+	B3GAT2,SMAP1,SMAP1	290173,813,813
chr17:7480960-7481428	chr17	+	7480983	7481463	True	NM_001416,NM_004870,NR_002918,NM_001040059,NR_002912,NR_024603,NR_002604,NM_001251,NM_001204510,NM_006942	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,+,+,+,+,-	EIF4A1,MPDU1,SNORA48,CD68,SNORA67,MPDU1,SNORD10,CD68,EIF4A1,SOX15	-5010,5501,-3003,1342,13,5501,-905,1341,-5010,12075
chr20:31370982-31372387	chr20	+	31371211	31372299	True	NM_175850,NM_053041	chr20,chr20	+,-	DNMT3B,COMMD7	-3609,-39397
chr15:51392129-51393160	chr15	+	51392201	51393053	True	NR_027642,NM_207381	chr15,chr15	+,-	LOC100132724,TNFAIP8L3	-155926,4482
chr19:44218891-44219242	chr19	+	44218895	44219209	True	NM_019108,NM_019612	chr19,chr19	-,+	C19orf61,IRGC	39983,1004
chr2:86344279-86344990	chr2	+	86344323	86344573	True	NM_015425,NM_017952	chr2,chr2	-,+	POLR1A,PTCD3	-11045,-11075
chr2:220284748-220285117	chr2	+	220284751	220285077	True	NM_012100,NM_001927	chr2,chr2	-,+	DNPEP,DES	-32089,-1703
chr16:2186857-2187571	chr16	+	2187287	2187466	True	NM_001009944,NM_000296,NR_037467,NM_014353	chr16,chr16,chr16,chr16	-,-,-,+	PKD1,PKD1,MIR3180-5,RAB26	-1388,-1388,-1157,11184
chr7:5600539-5601438	chr7	+	5600560	5601302	True	NM_001101,NM_003088	chr7,chr7	-,+	ACTB,FSCN1	-30328,31151
chr3:13592452-13593333	chr3	+	13592454	13593244	True	NM_001004019,NM_001998,NM_024923	chr3,chr3,chr3	+,+,-	FBLN2,FBLN2,NUP210	-1880,-1880,-130645
chr1:178692432-178693967	chr1	+	178692557	178693769	True	NM_152663,NM_004673	chr1,chr1	+,-	RALGPS2,ANGPTL1	530,146496
chr19:52430702-52430924	chr19	+	52430720	52430970	True	NM_024840,NM_001031721,NM_023074	chr19,chr19,chr19	+,+,-	ZNF613,ZNF613,ZNF649	-83,-83,-22415
chr7:92157828-92159413	chr7	+	92157973	92158921	True	NR_026902,NM_000466,NM_032120	chr7,chr7,chr7	+,-,+	MGC16142,PEX1,C7orf64	8867,-128,63
chr12:54520985-54521387	chr12	+	54521021	54521338	True	NR_026656,NR_026658	chr12,chr12	+,-	LOC400043,LOC100240735	-1217,-45414
chrX:73641071-73641544	chrX	+	73641112	73641586	True	NM_006517,NR_028379	chrX,chrX	+,-	SLC16A2,MIR374AHG	-78,-127703
chr1:152732732-152733507	chr1	+	152732901	152733393	True	NM_001025231,NM_178351	chr1,chr1	+,-	KPRP,LCE1C	-2446,45764
chr10:103913723-103914133	chr10	+	103913722	103914192	True	NM_001113407,NM_004741	chr10,chr10	-,+	LDB1,NOLC1	-33512,-1846
chr7:151136274-151137039	chr7	+	151136327	151136911	True	NR_034013,NM_144727,NR_037468	chr7,chr7,chr7	+,-,-	LOC100131176,CRYGN,MIR3907	-30056,238,-5602
chr17:73402235-73402628	chr17	+	73402270	73402638	True	NR_037449,NM_002086,NM_203506	chr17,chr17,chr17	+,-,-	MIR3678,GRB2,GRB2	-176,-481,-480
chr5:119833377-119834895	chr5	+	119833555	119834789	True	NM_173666,NM_016644	chr5,chr5	-,+	DTWD2,PRR16	-1509315,-33601
chr2:37899963-37901232	chr2	+	37900031	37901207	True	NM_006449,NM_001170791	chr2,chr2	-,+	CDC42EP3,FAM82A1	-705,251254
chr3:5162028-5162576	chr3	+	5162221	5162468	True	NR_037903,NM_018184	chr3,chr3	-,+	LOC100507582,ARL8B	-214035,1461
chr19:55105921-55106739	chr19	+	55106250	55106678	True	NM_006863,NM_145057	chr19,chr19	+,-	LILRA1,CDC42EP5	-1188,-121828
chr1:26127406-26128005	chr1	+	26127599	26127895	True	NM_206926,NM_020451,NR_024498	chr1,chr1,chr1	+,+,-	SEPN1,SEPN1,LOC646471	-983,-983,22252
chr2:188386386-188387540	chr2	+	188386590	188387303	True	NM_006287,NM_016315	chr2,chr2	-,+	TFPI,GULP1	31973,770086
chr19:39281138-39281391	chr19	+	39281229	39281293	True	NM_002307,NM_001042507	chr19,chr19	-,+	LGALS7,LGALS7B	-17072,-1438
chr19:39281138-39281391	chr19	-	39262705	39262769	False	NM_002307,NM_001042507	chr19,chr19	-,+	LGALS7,LGALS7B	1446,17080
chr2:54569944-54571085	chr2	+	54569946	54570984	True	NM_001003937,NM_001100396	chr2,chr2	-,+	TSPYL6,C2orf73	-86537,-11931
chr2:64371231-64371433	chr2	+	64371290	64371414	True	NM_006759,NM_020651	chr2,chr2	+,-	UGP2,PELI1	-302327,241
chr10:43954808-43955543	chr10	+	43954964	43955028	True	NR_026693,NM_001098204	chr10,chr10	+,-	ZNF487P,HNRNPF	-22441,-50268
chr1:160377043-160377752	chr1	+	160377051	160377736	True	NM_004371,NM_020335	chr1,chr1	-,+	COPA,VANGL2	-63697,-6738
chr10:126108314-126110014	chr10	+	126108361	126109769	True	NM_000274,NM_001171814,NM_001167880	chr10,chr10,chr10	-,-,+	OAT,OAT,LHPP	-816,-816,40571
chr12:30905149-30906912	chr12	+	30905391	30906763	True	NM_023925,NM_001002259,NM_032156,NM_001080509	chr12,chr12,chr12,chr12	-,-,-,+	CAPRIN2,CAPRIN2,CAPRIN2,TSPAN11	742,742,742,173074
chr3:15671190-15671876	chr3	+	15671240	15671867	True	NM_000060,NM_012260	chr3,chr3	+,-	BTD,HACL1	-28037,-28110
chr19:13043921-13044235	chr19	+	13043925	13044221	True	NM_004461,NM_004343	chr19,chr19	-,+	FARSA,CALR	387,5192
chr1:54196754-54197863	chr1	+	54196780	54197886	True	NM_147193,NM_000792	chr1,chr1	-,+	GLIS1,DIO1	2041,161974
chr20:31806870-31808058	chr20	+	31807148	31807525	True	NM_001042439,NM_178466,NM_016082	chr20,chr20,chr20	+,+,-	C20orf71,C20orf71,CDK5RAP1	-2073,-2073,181875
chr2:43863837-43864206	chr2	+	43863879	43864137	True	NM_001101330,NM_172069	chr2,chr2	-,+	LOC728819,PLEKHH2	39374,301
chr9:139624234-139624521	chr9	+	139624241	139624517	True	NR_003672,NR_024543,NR_024542,NR_002975,NR_033913,NR_002958	chr9,chr9,chr9,chr9,chr9,chr9	-,-,-,-,+,-	SNHG7,SNHG7,SNHG7,SNORA43,LOC100128593,SNORA17	-1605,-1605,-1605,-3552,16095,-2910
chr17:45060953-45061736	chr17	+	45060969	45061674	True	NM_203400,NM_054022	chr17,chr17	-,+	RPRML,GOSR2	-4355,-60542
chr17:26941122-26942150	chr17	+	26941195	26942147	True	NM_001174103,NM_003170	chr17,chr17	-,+	SGK494,SUPT6H	16,47154
chr5:17219350-17219834	chr5	+	17219407	17219881	True	NR_027253,NM_006317	chr5,chr5	-,+	LOC285696,BASP1	-1876,-1708
chr6:144222084-144222487	chr6	+	144222262	144222368	True	NM_001013623,NM_001080952	chr6,chr6	+,-	C6orf94,PLAGL1	-36740,107231
chr2:75770915-75772756	chr2	+	75771163	75772585	True	NM_014763,NM_001135032	chr2,chr2	+,-	MRPL19,FAM176A	101323,15559
chr10:81889423-81889960	chr10	+	81889534	81889843	True	NM_001012973,NR_027432	chr10,chr10	+,-	PLAC9,LOC219347	2414,-50585
chr1:211499750-211500121	chr1	+	211499756	211500038	True	NM_004619,NM_001164688,NM_001033910	chr1,chr1,chr1	+,-,+	TRAF5,RD3,TRAF5	-12,166271,109
chr4:87514884-87515277	chr4	+	87514909	87515217	True	NM_080685,NM_080684,NM_006264,NM_080683,NM_002753	chr4,chr4,chr4,chr4,chr4	+,+,+,+,-	PTPN13,PTPN13,PTPN13,PTPN13,MAPK10	250,250,250,250,-140626
chr6:34393396-34393766	chr6	+	34393422	34393808	True	NM_001204091,NM_001203245,NM_020804,NM_001202470,NM_001014	chr6,chr6,chr6,chr6,chr6	-,-,+,-,-	RPS10,RPS10,PACSIN1,RPS10-NUDT3,RPS10	144,60,40044,144,144
chr7:149412483-149413500	chr7	+	149412533	149413379	True	NM_207336,NM_032534	chr7,chr7	-,+	ZNF467,KRBA1	56966,-436
chr2:43457060-43458372	chr2	+	43457293	43458271	True	NR_027251,NM_006887	chr2,chr2	+,-	LOC100129726,ZFP36L2	-2995,-3548
chr15:78287554-78288491	chr15	+	78287620	78288060	True	NM_001101404,NR_026998	chr15,chr15	+,-	SH2D7,LOC91450	96866,-1053
chr15:78287554-78288491	chr15	-	79048484	79048549	False	NR_036495,NM_014272	chr15,chr15	+,-	LOC646938,ADAMTS7	-4163,55284
chr11:134121456-134122761	chr11	+	134121562	134122530	True	NM_001037304,NM_001037305,NM_199297,NM_014384,NM_014174,NM_199298	chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,+,-,-	THYN1,THYN1,THYN1,ACAD8,THYN1,THYN1	780,780,780,903,780,780
chr9:14687388-14688782	chr9	+	14687788	14688314	True	NR_003920,NM_178566	chr9,chr9	+,-	LOC389705,ZDHHC21	305010,5216
chr10:115529468-115530702	chr10	+	115529755	115530653	True	NM_182601,NM_014881	chr10,chr10	+,-	C10orf81,DCLRE1A	-5231,83256
chr14:93651707-93652372	chr14	+	93651764	93652052	True	NM_022151,NM_001098621,NM_015676	chr14,chr14,chr14	-,+,+	MOAP1,C14orf109,C14orf109	-515,-440,-519
chr19:21102563-21102947	chr19	+	21102731	21102995	True	NM_003429,NR_034060,NM_145297	chr19,chr19,chr19	+,+,-	ZNF85,ZNF85,ZNF626	3063,3063,-258329
chr11:2180954-2181256	chr11	+	2180983	2181277	True	NR_028044,NM_000207,NR_003512,NM_001185098,NM_001042376,NM_001185097	chr11,chr11,chr11,chr11,chr11,chr11	+,-,-,-,-,-	IGF2AS,INS,INS-IGF2,INS,INS-IGF2,INS	-19276,1212,1212,1212,1212,1212
chr15:34630774-34631286	chr15	+	34631010	34631282	True	NM_133647,NM_001042496,NM_001042497,NM_001042494,NM_001042495,NM_018648,NM_175741	chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,-,-,-,-,+	SLC12A6,SLC12A6,SLC12A6,SLC12A6,SLC12A6,NOP10,C15orf55	-1965,-1049,-1965,-1049,-745,4130,6783
chr18:59560493-59560867	chr18	+	59560531	59560675	True	NM_020854,NM_173557	chr18,chr18	+,-	KIAA1468,RNF152	293848,-227
chr2:15731644-15731891	chr2	+	15731715	15731849	True	NM_004939,NM_015909	chr2,chr2	+,-	DDX1,NBAS	4,-30261
chr16:7381609-7382859	chr16	+	7381610	7382764	True	NM_001146336,NM_145891,NM_145892,NM_145893	chr16,chr16,chr16,chr16	-,+,+,+	TMEM114,RBFOX1,RBFOX1,RBFOX1	1239518,-14,-14,-14
chr2:157189779-157190516	chr2	+	157189933	157190294	True	NM_001083112,NM_006186	chr2,chr2	+,-	GPD2,NR4A2	101670,-646
chr1:53794483-53794693	chr1	+	53794639	53794733	True	NM_004631,NM_033300,NM_033067,NM_001018054,NM_017522	chr1,chr1,chr1,chr1,chr1	-,-,+,-,-	LRP8,LRP8,DMRTB1,LRP8,LRP8	-913,-818,130338,-913,-913
chr20:37856675-37857367	chr20	+	37857006	37857219	True	NR_033905,NR_027124	chr20,chr20	+,-	DHX35,LOC339568	-266076,-3615
chr17:46681870-46682396	chr17	+	46681918	46682377	True	NM_004502,NM_024016,NM_018952,NR_033205	chr17,chr17,chr17,chr17	-,-,-,+	HOXB7,HOXB8,HOXB6,LOC404266	6063,9981,14,-8649
chr4:57370718-57371051	chr4	+	57370831	57371031	True	NM_002703,NM_206919	chr4,chr4	-,+	PPAT,ARL9	-69029,343
chr14:23837154-23837600	chr14	+	23837210	23837574	True	NM_032459,NM_022789,NM_172314,NM_001037288,NM_138460,NM_005864	chr14,chr14,chr14,chr14,chr14,chr14	-,+,+,+,+,-	EFS,IL25,IL25,CMTM5,CMTM5,EFS	-2368,4495,4443,8442,8442,-2368
chr14:24666820-24667147	chr14	+	24666986	24667180	True	NM_006405,NM_001014842,NM_024658,NM_174944,NM_001184739	chr14,chr14,chr14,chr14,chr14	-,-,-,+,+	TM9SF1,TM9SF1,IPO4,TSSK4,TSSK4	-2104,-2104,-8862,7745,7745
chrX:68048582-68048931	chrX	+	68048587	68048937	True	NM_001032396,NM_004429	chrX,chrX	-,+	PJA1,EFNB1	336478,10
chr19:13262681-13263066	chr19	+	13262680	13263103	True	NM_004907,NM_003765	chr19,chr19	+,-	IER2,STX10	-1449,-1693
chr6:135501735-135502060	chr6	+	135501767	135501999	True	NM_001161658,NM_001161659,NM_001161660,NM_001130173,NM_001130172,NM_001161656,NM_001161657,NM_001145207,NM_005375	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	+,+,+,+,+,+,+,-,+	MYB,MYB,MYB,MYB,MYB,MYB,MYB,HBS1L,MYB	453,453,453,453,453,453,453,-125731,453
chr9:15492937-15494485	chr9	+	15493246	15494056	True	NM_173550,NM_021144	chr9,chr9	+,-	C9orf93,PSIP1	59040,16295
chr2:55509381-55509704	chr2	+	55509417	55509705	True	NR_027258,NM_002453	chr2,chr2	+,-	PRORSD1P,MTIF2	-13,-13033
chr11:66673978-66674454	chr11	+	66673993	66674489	True	NM_024036,NM_022172	chr11,chr11	+,-	LRFN4,PC	-49168,901
chr1:2520990-2521472	chr1	+	2520994	2521466	True	NR_036637,NM_001195741,NM_001195740,NR_037844,NR_036638,NM_001195738,NM_152371,NM_001195736,NM_001195737	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,-,+,+,+,+,+	C1orf93,C1orf93,C1orf93,LOC100133445,C1orf93,C1orf93,C1orf93,C1orf93,C1orf93	-3146,-2856,-2856,-32544,-3146,-2856,-2856,-2856,-2856
chr22:46647059-46647891	chr22	+	46647154	46647931	True	NM_207327,NM_017931	chr22,chr22	-,+	C22orf40,TTC38	-961,15929
chr20:55175954-55176564	chr20	+	55176071	55176322	True	NM_080615,NM_003222	chr20,chr20	-,+	GCNT7,TFAP2C	-75090,28035
chr14:89290069-89290310	chr14	+	89290068	89290368	True	NM_183387,NM_144596,NM_198310,NM_198309	chr14,chr14,chr14,chr14	-,+,+,+	EML5,TTC8,TTC8,TTC8	-30972,609,609,609
chr12:57157195-57159074	chr12	+	57157386	57158572	True	NM_000946,NM_003725	chr12,chr12	-,+	PRIM1,HSD17B6	-11240,-335
chr1:228603127-228603873	chr1	+	228603271	228603819	True	NM_001134855,NM_145214,NM_001024940,NM_003493,NM_016102,NM_175055	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,+	TRIM17,TRIM11,TRIM17,HIST3H3,TRIM17,HIST3H2BB	814,-8754,814,9257,814,41988
chr10:47896128-47897297	chr10	+	47896267	47897266	True	NM_018232,NM_002900	chr10,chr10	+,-	FAM21B,RBP3	-2295,493775
chr10:47896128-47897297	chr10	+	46235132	46236131	False	NM_174890,NM_015262	chr10,chr10	-,+	ANUBL1,FAM21C	-66881,-12535
chr10:47896128-47897297	chr10	+	51840129	51841128	False	NM_018232,NM_001143974	chr10,chr10	+,-	FAM21B,ASAH2	-2294,167292
chr5:80254836-80255158	chr5	+	80254941	80255206	True	NM_006909,NM_000791	chr5,chr5	+,-	RASGRF2,DHFR	1351,-304141
chr21:27600533-27601452	chr21	+	27600929	27601481	True	NM_002040,NM_001136131	chr21,chr21	+,-	GABPA,APP	-493662,-57483
chr21:27600533-27601452	chrX	-	95884182	95884261	False	NM_007309,NR_003539	chrX,chrX	+,-	DIAPH2,LOC643486	55400,-291281
chr21:27600533-27601452	chr8	+	3096750	3096833	False	NM_033225,NM_003970	chr8,chr8	-,+	CSMD1,MYOM2	1755572,-1103670
chr19:40700522-40700752	chr19	+	40700625	40700701	True	NM_152479,NM_002446	chr19,chr19	-,+	TTC9B,MAP3K10	23655,-3033
chr5:63801817-63802100	chr5	+	63801824	63802130	True	NM_001029875,NM_173829	chr5,chr5	+,-	RGS7BP,SREK1IP1	321,262416
chr8:7922121-7922916	chr8	+	7922666	7922962	True	NR_031689,NR_027424	chr8,chr8	-,+	MIR548I3,FAM66E	23699,-110182
chr8:7922121-7922916	chr8	-	12459042	12459114	False	NR_037492,NR_037495	chr8,chr8	-,+	MIR3926-1,MIR3926-2	125749,125631
chr2:38827866-38829136	chr2	+	38827942	38829142	True	NM_001142650,NM_138801,NM_138394	chr2,chr2,chr2	-,+,-	HNRPLL,GALM,HNRPLL	1086,63909,1086
chr19:42724269-42724963	chr19	+	42724407	42724992	True	NM_133444,NM_133328	chr19,chr19	+,-	ZNF526,DEDD2	34,-2594
chr17:40271688-40272104	chr17	+	40271693	40272147	True	NM_024119,NM_021078,NM_033194	chr17,chr17,chr17	-,-,+	DHX58,KAT2A,HSPB9	-6942,1285,2608
chr2:204100962-204101684	chr2	+	204101407	204101666	True	NM_213589,NM_177538	chr2,chr2	-,+	RAPH1,CYP20A1	298447,1497
chr12:28128117-28128365	chr12	+	28128238	28128302	True	NM_020782,NM_002820,NM_198966,NM_198964,NM_198965	chr12,chr12,chr12,chr12,chr12	+,-,-,-,-	KLHDC5,PTHLH,PTHLH,PTHLH,PTHLH	-195102,-3322,-5344,-5344,-3322
chr3:12708501-12708838	chr3	+	12708635	12708702	True	NM_002880,NM_014160	chr3,chr3	-,+	RAF1,MKRN2	-2935,-110096
chr6:10698732-10699714	chr6	+	10698856	10699731	True	NM_001145020,NR_026736,NR_026737,NM_017906	chr6,chr6,chr6,chr6	-,-,-,+	C6orf52,C6orf52,C6orf52,PAK1IP1	-4017,-3826,-4017,-3719
chr1:855426-855966	chr1	+	855581	855991	True	NM_152486,NR_026874	chr1,chr1	+,-	SAMD11,FLJ39609	5129,-764
chr5:16931609-16933075	chr5	+	16931782	16932902	True	NM_012334,NM_006317	chr5,chr5	-,+	MYO10,BASP1	3541,284847
chr3:179732182-179732894	chr3	+	179732270	179732941	True	NM_003940,NM_016559	chr3,chr3	+,-	USP13,PEX5L	-361394,21626
chr2:175498582-175499375	chr2	+	175498588	175499404	True	NM_003387,NM_024583	chr2,chr2	-,+	WIPF1,SCRN3	15,-238182
chr12:113661642-113662292	chr12	+	113661641	113662204	True	NM_138451,NM_017901,NM_001143819	chr12,chr12,chr12	-,+,+	IQCD,TPCN1,TPCN1	-2761,-2438,-2438
chr10:15092875-15094787	chr10	+	15093347	15094606	True	NM_001039844,NM_018324,NM_001039702	chr10,chr10,chr10	-,+,+	ACBD7,OLAH,OLAH	36228,-7510,-7510
chr1:47070170-47070755	chr1	+	47070307	47070757	True	NM_198973,NM_001145474,NM_003684,NR_024174,NM_001135553,NR_024176	chr1,chr1,chr1,chr1,chr1,chr1	-,+,-,-,-,-	MKNK1,C1orf223,MKNK1,MKNK1,MKNK1,MKNK1	-341,66742,-341,-341,-341,-341
chr1:154585046-154586234	chr1	+	154585145	154586088	True	NM_015841,NM_015840,NM_001193495,NM_000748,NM_001111	chr1,chr1,chr1,chr1,chr1	-,-,-,+,-	ADAR,ADAR,ADAR,CHRNB2,ADAR	-4421,-4421,-6369,-44948,-4421
chr8:27336555-27336854	chr8	+	27336602	27336762	True	NM_001979,NM_000742	chr8,chr8	+,-	EPHX2,CHRNA2	11882,101
chr1:214458000-214458603	chr1	+	214458235	214458609	True	NM_020197,NM_005401	chr1,chr1	+,-	SMYD2,PTPN14	-3733,266473
chr3:49159421-49159684	chr3	+	49159605	49159723	True	NM_001199161,NM_001199160,NM_001199162,NM_173546,NM_006677	chr3,chr3,chr3,chr3,chr3	-,-,-,+,-	USP19,USP19,USP19,KLHDC8B,USP19	-1234,-1234,-1234,49294,-1234
chr2:120981568-120982640	chr2	+	120981576	120982585	True	NM_002881,NR_000034	chr2,chr2	+,-	RALB,TMEM185B	27828,-592
chr11:36517296-36517984	chr11	+	36517463	36517829	True	NM_000448,NM_004620	chr11,chr11	+,-	RAG1,TRAF6	71733,14052
chr5:180016922-180017132	chr5	+	180016946	180017130	True	NM_052863,NM_015455	chr5,chr5	-,+	SCGB3A1,CNOT6	1407,-95580
chr11:118994688-118995167	chr11	+	118994812	118995203	True	NM_015517,NM_198971,NM_001382	chr11,chr11,chr11	+,+,-	HINFP,HINFP,DPAGT1	-2575,-2575,-22027
chrX:35816061-35816430	chrX	+	35816266	35816362	True	NM_001099921,NM_031442	chrX,chrX	+,-	MAGEB16,TMEM47	96,-1140861
chr5:40974813-40975556	chr5	+	40974911	40975450	True	NM_000587,NM_173489	chr5,chr5	+,-	C7,HEATR7B2	-65373,96049
chr11:6256400-6256613	chr11	+	6256412	6256628	True	NM_001037329,NM_032127,NM_001098794	chr11,chr11,chr11	+,-,-	CNGA4,FAM160A2,FAM160A2	3701,-471,-471
chr1:165509475-165510535	chr1	+	165509577	165510530	True	NM_001005214,NR_026744	chr1,chr1	+,-	LRRC52,LOC400794	2947,40862
chr11:7334662-7335001	chr11	+	7334663	7335044	True	NM_013249,NM_175733	chr11,chr11	-,+	ZNF214,SYT9	-293077,-61534
chr22:23973460-23973720	chr22	+	23973651	23973747	True	NM_153615,NM_016449	chr22,chr22	+,-	RGL4,C22orf43	59300,811
chr1:43915370-43917038	chr1	+	43915803	43916981	True	NM_001190880,NM_031207,NM_015284	chr1,chr1,chr1	-,-,+	HYI,HYI,KIAA0467	2729,2729,-27057
chr18:29076788-29077044	chr18	+	29076974	29077080	True	NM_004775,NM_001943	chr18,chr18	-,+	B4GALT6,DSG2	187656,946
chr5:172067040-172067640	chr5	+	172067074	172067619	True	NM_001142651,NM_004417	chr5,chr5	+,-	NEURL1B,DUSP1	656,130641
chr19:55660311-55660589	chr19	+	55660522	55660590	True	NM_017729,NM_001126132,NM_001126133,NM_000363,NM_003283	chr19,chr19,chr19,chr19,chr19	+,-,-,-,-	EPS8L1,TNNT1,TNNT1,TNNI3,TNNT1	-68813,66,66,8560,66
chr1:6526958-6527462	chr1	+	6527051	6527501	True	NM_148967,NM_001039664,NM_003790,NM_031475,NM_148970,NM_148966,NM_148965	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,-,-	TNFRSF25,TNFRSF25,TNFRSF25,ESPN,TNFRSF25,TNFRSF25,TNFRSF25	-796,-796,-796,-42254,-796,-796,-796
chr10:16856807-16857123	chr10	+	16856846	16857020	True	NM_012425,NM_030664,NM_152724	chr10,chr10,chr10	-,+,-	RSU1,PTER,RSU1	2483,-377934,2483
chr10:91294507-91294779	chr10	+	91294598	91294794	True	NM_213606,NM_012420	chr10,chr10	-,+	SLC16A12,IFIT5	577,-120330
chr1:146712593-146714183	chr1	+	146712760	146714125	True	NM_004284,NM_001461	chr1,chr1	+,-	CHD1L,FMO5	165,-15530
chrX:41775810-41777411	chrX	+	41775879	41777305	True	NM_003688,NM_001126055,NM_001126054,NM_080817	chrX,chrX,chrX,chrX	-,-,-,+	CASK,CASK,CASK,GPR82	5033,5033,5033,-192522
chr1:24019374-24020324	chr1	+	24019519	24020339	True	NM_001199802,NM_001127621,NM_000975	chr1,chr1,chr1	+,-,+	RPL11,GALE,RPL11	-1313,105771,-1313
chr12:121791999-121793567	chr12	+	121792368	121793078	True	NM_001137559,NM_016237,NM_025126	chr12,chr12,chr12	-,-,+	ANAPC5,ANAPC5,RNF34	-356,-2103,44823
chr1:151763250-151763702	chr1	+	151763256	151763688	True	NM_016178,NM_006862,NM_001083963,NM_001083965,NM_001083964	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	OAZ3,TDRKH,TDRKH,TDRKH,TDRKH	-24176,-246,-246,-246,-246
chr12:133003392-133003895	chr12	+	133003405	133003809	True	NM_001142641,NM_001122636	chr12,chr12	+,-	FBRSL1,GALNT9	63347,-97500
chr16:56994963-56995181	chr16	+	56995014	56995074	True	NM_000078,NM_024946	chr16,chr16	+,-	CETP,FAM192A	760,224952
chr1:224518755-224519490	chr1	+	224518888	224519320	True	NM_002533,NM_206840,NM_014184	chr1,chr1,chr1	-,-,+	NVL,NVL,CNIH4	-1016,-1016,25274
chr20:44468009-44469022	chr20	+	44468565	44468833	True	NM_003279,NM_033421,NM_001042632,NM_001042633,NM_152897	chr20,chr20,chr20,chr20,chr20	-,+,+,+,+	TNNC2,SNX21,SNX21,SNX21,SNX21	-12612,-6148,-6148,-6148,-6148
chr7:136398329-136399169	chr7	+	136398355	136399024	True	NM_002825,NM_001006627	chr7,chr7	-,+	PTN,CHRM2	629572,154374
chr5:778376-779432	chr5	+	778380	779394	True	NM_001166260,NM_024786	chr5,chr5	+,-	TRIP13,ZDHHC11	113574,71757
chr5:778376-779432	chr5	+	686317	687331	False	NM_018140,NM_007030	chr5,chr5	+,-	CEP72,TPPP	-73963,6229
chr11:14681207-14682897	chr11	+	14681476	14682277	True	NM_000922,NM_148976	chr11,chr11	+,-	PDE3B,PSMA1	-16260,-16296
chr1:204797408-204797609	chr1	+	204797411	204797593	True	NM_001005389,NM_001005388,NM_001160332,NM_001160333,NM_201630,NM_015090	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,-,+	NFASC,NFASC,NFASC,NFASC,LRRN2,NFASC	188,188,188,188,-142814,188
chr1:31408698-31408944	chr1	+	31408718	31408948	True	NR_033295,NR_004054,NR_002762	chr1,chr1,chr1	-,-,+	SNORD103B,SNORD103A,PRO0611	-95,-95,51963
chr1:31408698-31408944	chr1	+	31422147	31422377	False	NR_033295,NR_004054,NR_002762	chr1,chr1,chr1	-,-,+	SNORD103B,SNORD103A,PRO0611	-95,-95,38534
chr14:97399162-97400014	chr14	+	97399192	97400040	True	NM_003384,NM_018036	chr14,chr14	+,-	VRK1,ATG2B	-135561,-569514
chr16:71793081-71794066	chr16	+	71793746	71794115	True	NR_003059,NM_001137675	chr16,chr16	-,+	SNORD71,ATXN1L	-1356,85783
chr4:56820713-56821804	chr4	+	56820744	56821846	True	NM_006681,NM_025009	chr4,chr4	-,+	NMU,CEP135	-318279,-5767
chr19:36140675-36141198	chr19	+	36140800	36141252	True	NM_000704,NM_001863,NM_014209	chr19,chr19,chr19	-,+,+	ATP4A,COX6B1,ETV2	-86240,-1734,-8212
chr6:39289080-39290277	chr6	+	39289141	39290257	True	NM_001135105,NM_032115,NM_001135107,NM_001135106,NM_001135111,NM_031460,NM_002062	chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,-,-,-,+	KCNK16,KCNK16,KCNK16,KCNK16,KCNK17,KCNK17,GLP1R	123,123,123,123,-6904,-6905,-272644
chr1:204041847-204042121	chr1	+	204041906	204041982	True	NM_005686,NR_027902	chr1,chr1	+,-	SOX13,C1orf157	263,-31514
chr10:82116454-82116788	chr10	+	82116469	82116673	True	NM_138812,NM_032372	chr10,chr10	-,+	DYDC1,DYDC2	1,-2
chr10:26996708-26997269	chr10	+	26996722	26997266	True	NM_014317,NM_001012750	chr10,chr10	+,-	PDSS1,ABI1	-10178,152800
chr10:105830259-105831447	chr10	+	105830290	105831387	True	NM_145247,NM_000494	chr10,chr10	+,-	MEIR5,COL17A1	50428,14302
chr8:35092323-35092702	chr8	+	35092422	35092688	True	NM_080872,NM_024025	chr8,chr8	+,-	UNC5D,DUSP26	286,-1634983
chr2:23651706-23652412	chr2	+	23651748	23652350	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	497642,-43509
chr20:61428430-61428841	chr20	+	61428456	61428576	True	NM_007346,NM_018270,NM_006602	chr20,chr20,chr20	+,+,-	OGFR,C20orf20,TCFL5	7600,-702,64589
chr7:64836871-64838090	chr7	+	64837136	64837678	True	NM_152626,NM_001007253,NM_007139	chr7,chr7,chr7	+,-,+	ZNF92,ERV3,ZNF92	1089,-370012,1089
chr17:35302966-35303734	chr17	+	35303268	35303418	True	NM_012138,NM_198837,NM_005568	chr17,chr17,chr17	+,-,+	AATF,ACACA,LHX1	2756,353324,-8548
chr9:36396576-36397501	chr9	+	36396609	36397519	True	NM_022781,NM_194328,NM_194329,NM_014791,NM_194332,NM_194330	chr9,chr9,chr9,chr9,chr9,chr9	-,-,-,+,-,-	RNF38,RNF38,RNF38,MELK,RNF38,RNF38	2827,3451,2827,175385,3451,3726
chr9:113096568-113097607	chr9	+	113096831	113097479	True	NM_001136562,NM_001003936	chr9,chr9	+,-	AKAP2,TXNDC8	-209101,2696
chr1:17527563-17528180	chr1	+	17527571	17527949	True	NM_007365,NM_013358	chr1,chr1	-,+	PADI2,PADI1	-81623,3671
chr5:177098296-177098669	chr5	+	177098317	177098665	True	NR_026921,NM_007255	chr5,chr5	-,+	LOC202181,B4GALT7	663,-71256
chr5:177098296-177098669	chr5	-	175665996	175666326	False	NR_036494,NM_198567	chr5,chr5	-,+	LOC643201,C5orf25	-39698,-677
chr10:43932518-43932721	chr7	+	77137692	77137758	False	NM_002835,NM_017439	chr7,chr7	+,-	PTPN12,PION	29014,-91975
chr10:43932518-43932721	chr10	+	43932553	43932641	True	NR_026693,NM_001098204	chr10,chr10	+,-	ZNF487P,HNRNPF	-30,-27857
chr13:113623519-113623958	chr13	+	113623653	113623995	True	NM_024979,NR_034002,NM_001112732	chr13,chr13,chr13	+,-,+	MCF2L,MCF2L-AS1,MCF2L	9659,-701,-947
chr5:41904063-41904309	chr5	+	41904073	41904345	True	NM_000436,NM_175921	chr5,chr5	-,+	OXCT1,C5orf51	-33282,124
chr3:187570474-187570981	chr3	+	187570544	187571012	True	NR_034062,NM_001706	chr3,chr3	+,-	LOC100131635,BCL6	-150453,-107031
chr12:120886539-120887381	chr12	+	120887050	120887159	True	NM_016399,NM_176818,NR_033684	chr12,chr12,chr12	-,+,+	TRIAP1,GATC,GATC	-2835,-2860,-2860
chr1:4036847-4037681	chr1	+	4037009	4037661	True	NR_024455,NM_207356	chr1,chr1	+,-	LOC100133612,C1orf174	-220092,-220152
chr16:30126716-30127267	chr16	+	30126768	30126992	True	NR_027081,NM_024307,NM_002746,NM_001040056,NM_001109891	chr16,chr16,chr16,chr16,chr16	+,-,-,-,-	LOC100271831,GDPD3,MAPK3,MAPK3,MAPK3	-1386,-1890,7688,7688,7688
chr3:116165964-116166616	chr3	+	116165965	116166656	True	NR_015391,NM_002338	chr3,chr3	+,-	NCRNA00295,LSAMP	261978,-1580
chrY:9561276-9562996	chrY	+	9561359	9563013	True	NR_001536,NR_001535,NR_001534,NR_003588,NR_003592	chrY,chrY,chrY,chrY,chrY	+,-,-,-,-	TTTY2,TTTY21,TTTY7,TTTY21B,TTTY7B	10881,-2454,-8488,-2454,-8488
chrY:9561276-9562996	chrY	-	6307366	6309020	False	NR_003590,NR_001535,NR_001534,NR_003588,NR_003592	chrY,chrY,chrY,chrY,chrY	-,+,+,+,+	TTTY2B,TTTY21,TTTY7,TTTY21B,TTTY7B	-10881,2454,8488,2454,8488
chr15:43907759-43908178	chr15	+	43907765	43908167	True	NM_020990,NM_153700	chr15,chr15	+,-	CKMT1B,STRC	-22564,2881
chr15:43907759-43908178	chr15	+	44007227	44007629	False	NM_001015001,NR_002318	chr15,chr15	+,-	CKMT1A,CATSPER2P1	-22194,30917
chr3:38207219-38208203	chr3	+	38207397	38207951	True	NM_005109,NR_024024	chr3,chr3	+,-	OXSR1,ACAA1	-422,-28664
chr1:222886952-222887703	chr1	+	222887007	222887543	True	NM_022831,NM_144695	chr1,chr1	-,+	AIDA,BROX	-1143,-1159
chr18:35147992-35148474	chr18	+	35147991	35148330	True	NM_020180,NM_001025088,NM_001025089,NM_001025087,NR_036202	chr18,chr18,chr18,chr18,chr18	-,-,-,-,+	CELF4,CELF4,CELF4,CELF4,MIR4318	-1991,-1991,-1991,-1991,88767
chr16:79809558-79810712	chr16	+	79809636	79810737	True	NM_005360,NM_130897	chr16,chr16	-,+	MAF,DYNLRB2	-175014,764116
chr15:44083753-44084296	chr15	+	44083840	44084144	True	NM_016400,NM_001199885,NM_001033517,NM_001018108,NR_037673,NR_037672,NM_001199878,NM_001199876,NM_001199875,NR_031695	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,-,+,+,+,+,+,+,-	C15orf63,C15orf63,SERINC4,SERF2,SERF2-C15ORF63,SERF2,SERF2,SERF2,SERF2,MIR1282	8474,8474,8162,-41,29,29,430,29,29,1864
chr5:87976900-87977708	chr5	+	87976922	87977749	True	NR_024383,NR_024384,NM_022650,NR_015436	chr5,chr5,chr5,chr5	-,-,+,-	LOC645323,LOC645323,RASA1,LOC645323	-2660,-7776,-1412207,2922
chr4:164061358-164062371	chr4	+	164061459	164062132	True	NM_006174,NM_001128931	chr4,chr4	+,-	NPY5R,NAF1	202958,25998
chr19:3982747-3983068	chr19	+	3982841	3983005	True	NR_002602,NM_015897,NM_001961	chr19,chr19,chr19	-,+,-	SNORD37,PIAS4,EEF2	-271,24743,2506
chr12:72244689-72245262	chr12	+	72245019	72245251	True	NR_027449,NR_024072	chr12,chr12	+,-	TBC1D15,MRS2P2	-11584,-256
chr7:138479773-138481518	chr7	+	138479985	138481336	True	NM_020632,NM_130840,NM_001085429	chr7,chr7,chr7	-,-,+	ATP6V0A4,ATP6V0A4,TMEM213	1655,1655,1402
chr16:70329117-70330332	chr16	+	70329428	70330370	True	NM_001014451,NM_001605,NM_007242,NM_001014449	chr16,chr16,chr16,chr16	+,-,+,+	DDX19B,AARS,DDX19B,DDX19B	2701,-6016,2701,2701
chr20:1291381-1292945	chr20	+	1291522	1292496	True	NM_014723,NM_015685	chr20,chr20	+,-	SNPH,SDCBP2	-44613,1871
chr3:59029151-59030828	chr3	+	59029391	59030677	True	NM_198463,NM_153331	chr3,chr3	-,+	C3orf67,KCTD6	5096,-545350
chr16:29460829-29461782	chr16	+	29461033	29461468	True	NM_177552,NR_037608,NR_037609,NM_001017390,NM_001014999,NM_001015000,NM_024044,NM_001031827,NR_002454,NM_001039182,NM_178044	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,+,+,-,+,-,+	SULT1A3,SLX1A-SULT1A3,SLX1B-SULT1A4,SULT1A4,SLX1A,SLX1A,SLX1B,BOLA2,LOC606724,BOLA2B,SLX1B	9738,4943,4943,9738,4353,4353,4353,4874,-419,4874,4353
chr16:29460829-29461782	chr16	+	30200372	30200807	False	NM_177552,NR_037608,NR_037609,NM_001017390,NM_001014999,NM_007074,NM_001015000,NM_024044,NM_001031827,NR_002454,NM_001039182,NM_178044,NM_001193333	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,+,+,+,-,+,-,+,+	SULT1A3,SLX1A-SULT1A3,SLX1B-SULT1A4,SULT1A4,SLX1A,CORO1A,SLX1A,SLX1B,BOLA2,LOC606724,BOLA2B,SLX1B,CORO1A	9741,4946,4946,9741,4356,-5693,4356,4356,4877,-419,4877,4356,-5693
chr9:87283345-87283555	chr9	+	87283423	87283577	True	NM_006180,NM_022127,NM_001007097,NM_001018064,NM_001018065,NM_001018066	chr9,chr9,chr9,chr9,chr9,chr9	+,-,+,+,+,+	NTRK2,SLC28A3,NTRK2,NTRK2,NTRK2,NTRK2	-8,-300010,1048,-8,1017,1017
chr22:35862890-35864007	chr22	+	35863264	35863985	True	NM_005368,NM_006739	chr22,chr22	-,+	MB,MCM5	149449,-67199
chr12:56224780-56226775	chr12	+	56224938	56226792	True	NR_036478,NR_036479,NM_002429,NM_032364,NR_036476,NR_036477	chr12,chr12,chr12,chr12,chr12,chr12	+,+,-,-,+,+	LOC440104,LOC440104,MMP19,DNAJC14,LOC440104,LOC440104	-1597,-1597,9993,-1518,-1597,-1597
chr12:93867366-93868726	chr12	+	93867676	93868576	True	NM_003348,NM_014050,NM_172177,NM_172178	chr12,chr12,chr12,chr12	-,+,+,+	UBE2N,MRPL42,MRPL42,MRPL42	-31650,-6459,-6459,-6459
chrX:10805823-10807284	chrX	+	10806133	10806952	True	NM_001122608,NM_033290	chrX,chrX	+,-	HCCS,MID1	322453,44914
chr4:17812378-17812681	chr4	+	17812403	17812651	True	NM_017741,NM_022346	chr4,chr4	-,+	DCAF16,NCAPG	-22,53
chr11:47869653-47869932	chr11	+	47869751	47869853	True	NM_015231,NM_001098503	chr11,chr11	-,+	NUP160,PTPRJ	254,132256
chr1:59605800-59606931	chr1	+	59606412	59606951	True	NR_027120,NM_001113411	chr1,chr1	-,+	LOC729467,FGGY	5585,155673
chr6:160386617-160387197	chr6	+	160386925	160387237	True	NM_000876,NM_030752	chr6,chr6	+,-	IGF2R,TCP1	2893,-176190
chr11:47788051-47788329	chr11	+	47788058	47788330	True	NM_001164379,NM_015308	chr11,chr11	+,-	FAM180B,FNBP4	-179879,713
chr9:69148163-69148527	chr9	+	69148163	69148223	True	NR_002836,NM_001098805	chr9,chr9	-,+	PGM5P2,ANKRD20A4	-309,233757
chr9:69148163-69148527	chr9	+	68810215	68810276	False	NR_002836,NR_034006	chr9,chr9	-,+	PGM5P2,LOC100132352	337639,-83736
chr19:54043934-54044653	chr19	+	54044083	54044357	True	NM_001079906,NR_002938	chr19,chr19	+,-	ZNF331,LOC284379	-2801,62458
chr8:23536759-23538000	chr8	+	23536836	23537719	True	NM_006167,NM_016612	chr8,chr8	-,+	NKX3-1,SLC25A37	2781,-150530
chrX:48770731-48771094	chrX	+	48770751	48771067	True	NM_005660,NM_006875,NM_001167992,NM_001032289,NM_001042498	chrX,chrX,chrX,chrX,chrX	-,-,+,-,-	SLC35A2,PIM2,PQBP1,SLC35A2,SLC35A2	-1834,5397,-15033,-1818,-1516
chr6:161693948-161694650	chr6	+	161693966	161694571	True	NM_006724,NM_020133	chr6,chr6	+,-	MAP3K4,AGPAT4	-281207,586
chr11:704729-705138	chr11	+	704771	705031	True	NM_021008,NM_001042463,NM_174940,NM_022772	chr11,chr11,chr11,chr11	-,+,+,+	DEAF1,TMEM80,TMEM80,EPS8L2	-9031,-9206,-9206,1088
chr12:54942556-54943184	chr12	+	54942729	54943177	True	NM_006741,NM_000924	chr12,chr12	-,+	PPP1R1A,PDE1B	39316,-1
chr3:184277436-184278808	chr3	+	184277477	184278746	True	NM_022149,NM_004443	chr3,chr3	-,+	MAGEF1,EPHB3	151140,840
chr14:102192618-102193422	chr14	+	102192671	102193225	True	NR_026774,NR_031649	chr14,chr14	+,-	NCRNA00239,MIR1247	3548,-165912
chr5:68627306-68627854	chr5	+	68627460	68627878	True	NM_176816,NM_133343	chr5,chr5	-,+	CCDC125,RAD17	-11050,37245
chr19:36000866-36001086	chr19	+	36001011	36001135	True	NM_001035516,NM_001190348,NM_001126059,NM_001126058,NM_001126057,NM_001190347,NM_001190349,NM_001126056,NR_033746,NM_014364,NM_033317	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,-,-,+,-	DMKN,DMKN,DMKN,DMKN,DMKN,DMKN,DMKN,DMKN,DMKN,GAPDHS,DMKN	-8198,3475,306,3475,3475,3475,3475,3475,327,23178,3475
chr2:127862948-127863343	chr2	+	127863101	127863317	True	NM_000312,NM_139350,NM_004305,NM_139347,NM_139346,NM_139345,NM_139344,NM_139343,NM_139351,NM_139349,NM_139348	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-,-,-,-,-,-	PROC,BIN1,BIN1,BIN1,BIN1,BIN1,BIN1,BIN1,BIN1,BIN1,BIN1	312678,1597,1597,1597,1597,1597,1597,1597,1597,1597,1597
chr4:39183213-39183876	chr4	+	39183365	39183860	True	NM_025132,NM_024943	chr4,chr4	+,-	WDR19,TMEM156	163,-149324
chr1:161378010-161378719	chr1	+	161378178	161378695	True	NM_001013625,NM_003001	chr1,chr1	-,+	C1orf192,SDHC	-40514,-94063
chr5:139937420-139938199	chr5	+	139937519	139938126	True	NM_133172,NM_001035235,NM_133174,NM_133173,NM_080670,NM_006051	chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,+,-	APBB3,SRA1,APBB3,APBB3,SLC35A4,APBB3	6114,-27,6114,6114,6293,6114
chr3:107577142-107577540	chr3	+	107577275	107577547	True	NR_015414,NR_015394	chr3,chr3	-,+	LOC151658,LOC285205	19422,24504
chr16:69143515-69143734	chr16	+	69143560	69143766	True	NM_138612,NM_001199280,NM_005329,NM_001040146	chr16,chr16,chr16,chr16	+,+,+,-	HAS3,HAS3,HAS3,CHTF8	-3482,-4144,-2168,22346
chr13:100148557-100149979	chr13	+	100148672	100149580	True	NM_004951,NM_004800	chr13,chr13	-,+	GPR183,TM9SF2	-188923,4147
chr18:34403716-34405115	chr18	+	34403792	34404956	True	NM_020776,NM_015476	chr18,chr18	+,-	KIAA1328,C18orf10	4123,4255
chr1:26798728-26798935	chr1	+	26798898	26798980	True	NM_005517,NM_173574	chr1,chr1	+,-	HMGN2,ZNF683	-47,-99632
chr19:17414641-17415048	chr19	+	17414654	17415010	True	NM_024050,NM_024527,NM_023937	chr19,chr19,chr19	+,-,+	DDA1,ABHD8,MRPL34	5326,-372,1466
chr3:193854808-193855015	chr3	+	193854889	193855029	True	NR_033944,NM_005524	chr3,chr3	-,+	LOC647323,HES1	-133441,-1009
chr16:67465655-67466185	chr16	+	67465670	67466150	True	NM_013304,NM_000196	chr16,chr16	-,+	ZDHHC1,HSD11B2	-15331,-685
chr7:138911133-138913093	chr7	+	138912320	138913054	True	NM_173569,NM_024625	chr7,chr7	+,-	UBN2,ZC3HAV1	3176,-117855
chr16:85622762-85624378	chr16	+	85623148	85624218	True	NM_001134473,NM_016095	chr16,chr16	+,-	KIAA0182,GINS2	20810,98420
chr3:50194723-50196094	chr3	+	50195139	50195783	True	NM_004186,NM_006764	chr3,chr3	+,-	SEMA3F,IFRD2	-2342,134293
chr7:99678666-99679034	chr7	+	99678677	99679027	True	NM_032924,NM_006833,NM_017715	chr7,chr7,chr7	-,+,-	ZNF3,COPS6,ZNF3	394,7555,394
chr3:126112451-126112820	chr3	+	126112467	126112733	True	NM_182628,NM_014079	chr3,chr3	+,-	CCDC37,KLF15	1048,-36231
chrX:62967656-62969269	chrX	+	62967743	62969089	True	NM_015185,NM_001010888,NM_001173480	chrX,chrX,chrX	-,+,-	ARHGEF9,ZC3H12B,ARHGEF9	5993,1739525,5993
chr20:30310777-30310990	chr20	+	30310820	30310886	True	NM_012112,NM_138578,NM_001191	chr20,chr20,chr20	+,-,-	TPX2,BCL2L1,BCL2L1	16017,-164,-164
chrX:97848221-97848559	chrX	+	97848232	97848603	True	NR_024608,NM_013347	chrX,chrX	-,+	LOC442459,RPA4	1346295,-1709376
chr4:186578599-186580153	chr4	+	186578765	186579734	True	NM_001114357,NM_001145674,NM_001145675	chr4,chr4,chr4	+,-,-	C4orf47,SORBS2,SORBS2	-228281,-642,-642
chr11:5016266-5017167	chr11	+	5016471	5017216	True	NM_001004755,NM_021801,NM_001004748	chr11,chr11,chr11	+,+,-	OR51L1,MMP26,OR51A2	2996,-7109,-39528
chr19:40322556-40323857	chr19	+	40322786	40323743	True	NM_006484,NM_004714,NM_001143832,NM_006483	chr19,chr19,chr19,chr19	-,-,+,-	DYRK1B,DYRK1B,LEUTX,DYRK1B	1149,1149,-55610,1149
chr22:38237925-38238911	chr22	+	38238300	38238924	True	NM_138797,NR_030395,NM_016091,NR_036556,NR_030396	chr22,chr22,chr22,chr22,chr22	-,-,+,-,-	ANKRD54,MIR658,EIF3L,ANKRD54,MIR659	1479,1504,6445,1479,4907
chr2:175870488-175871780	chr2	+	175870539	175871641	True	NM_001025201,NM_024583,NM_001822	chr2,chr2,chr2	-,+,-	CHN1,SCRN3,CHN1	-369,-610133,-369
chr1:68697485-68697756	chr1	+	68697565	68697806	True	NM_024911,NM_001002292,NM_001193334,NM_001924	chr1,chr1,chr1,chr1	-,-,-,+	WLS,WLS,WLS,GADD45A	529,474,474,-546756
chr18:61381717-61382609	chr18	+	61382435	61382626	True	NM_080475,NM_006919	chr18,chr18	+,-	SERPINB11,SERPINB3	-12294,-53238
chr12:25704531-25705394	chr12	+	25704616	25705029	True	NM_152590,NR_027296,NM_001145729,NM_001001660,NM_001145728	chr12,chr12,chr12,chr12,chr12	-,-,-,+,-	IFLTD1,IFLTD1,IFLTD1,LYRM5,IFLTD1	1204,1212,1243,-356519,1243
chr20:30414201-30414911	chr20	+	30414423	30414914	True	NM_004118,NM_033118	chr20,chr20	-,+	FOXS1,MYLK2	18557,-7296
chr1:100646394-100646854	chr1	+	100646531	100646608	True	NM_144620,NM_019083	chr1,chr1	-,+	LRRC39,CCDC76	-2760,-47889
chr6:151643609-151644405	chr6	+	151643616	151644358	True	NM_144497,NM_020861	chr6,chr6	+,-	AKAP12,ZBTB2	2307,68369
chr1:114471846-114472187	chr1	+	114471904	114472146	True	NM_152696,NM_198268,NM_006594	chr1,chr1,chr1	+,+,-	HIPK1,HIPK1,AP4B1	-3,-3,-24163
chrX:49459727-49459948	chrX	+	49459769	49459991	True	NM_003785,NM_001468	chrX,chrX	-,+	PAGE1,GAGE1	655,-96204
chr15:43774349-43774771	chr15	+	43774453	43774649	True	NM_002373,NM_001141979	chr15,chr15	+,-	MAP1A,TP53BP1	35156,10755
chr8:93100295-93101749	chr8	+	93100427	93101680	True	NM_001198679,NM_175635,NM_001198625,NM_001198627,NM_001198626,NM_001198632,NM_001198630,NM_001198631,NM_001198629,NM_001198634,NM_052832	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,-,-,-,-,-,-,+	RUNX1T1,RUNX1T1,RUNX1T1,RUNX1T1,RUNX1T1,RUNX1T1,RUNX1T1,RUNX1T1,RUNX1T1,RUNX1T1,SLC26A7	6260,5868,6260,6260,6260,5868,5868,6260,5868,6260,-838969
chr22:29467134-29467361	chr22	+	29467205	29467313	True	NM_015370,NM_032045,NM_001039570	chr22,chr22,chr22	-,+,+	C22orf31,KREMEN1,KREMEN1	-9298,1752,1752
chr14:21231890-21232387	chr14	+	21232213	21232399	True	NM_198232,NM_022360	chr14,chr14	-,+	RNASE1,EDDM3B	38209,4186
chr8:143485426-143485880	chr8	+	143485458	143485814	True	NM_145003,NM_001702	chr8,chr8	-,+	TSNARE1,BAI1	-915,59562
chr17:44071936-44072809	chr17_ctg5_hap1	-	794901	795301	False	NM_001007532,NR_024559	chr17_ctg5_hap1,chr17_ctg5_hap1	-,+	STH,LOC100128977	-3768,99392
chr17:44071936-44072809	chr17	+	44072447	44072847	True	NM_001007532,NR_024559	chr17,chr17	+,-	STH,LOC100128977	3768,-99568
chr7:128863022-128863757	chr7	+	128863260	128863430	True	NM_001130720,NM_015328,NR_034053	chr7,chr7,chr7	+,+,-	AHCYL2,AHCYL2,TNPO3	1424,1424,-168033
chr5:140762054-140762400	chr5	+	140762180	140762348	True	NM_032086,NM_032087,NM_003736,NM_032098,NM_032088,NM_018919,NM_005642,NM_014004,NM_018920	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,-,+,+	PCDHGA6,PCDHGA7,PCDHGB4,PCDHGB4,PCDHGA8,PCDHGA6,TAF7,PCDHGA8,PCDHGA7	-8580,118,5103,5103,9134,-8580,-61829,9134,118
chr6:111277375-111277971	chr6	+	111277631	111277773	True	NM_138408,NR_002932	chr6,chr6	+,-	GTF3C6,GSTM2P1	1989,91034
chr8:38237877-38239341	chr8	+	38237974	38238964	True	NM_017778,NM_001199660,NM_023034,NM_001199659,NM_144652	chr8,chr8,chr8,chr8,chr8	-,+,-,+,+	WHSC1L1,LETM2,WHSC1L1,LETM2,LETM2	876,5684,876,4994,4994
chr6:36957984-36958683	chr6	+	36958446	36958582	True	NM_014341,NM_173558	chr6,chr6	-,+	MTCH1,FGD2	-4497,14840
chr3:126073829-126074282	chr3	+	126073845	126074275	True	NM_182628,NM_014079	chr3,chr3	+,-	CCDC37,KLF15	39506,2011
chr6:49492108-49493198	chr6	+	49492134	49492873	True	NM_000255,NM_001010904	chr6,chr6	-,+	MUT,GLYATL3	-61093,-24521
chr3:49823992-49824199	chr3	+	49824088	49824242	True	NM_153273,NM_001006115,NM_203370	chr3,chr3,chr3	-,-,+	IP6K1,IP6K1,C3orf54	-115,-115,16444
chr20:23471625-23472315	chr20	+	23471646	23472306	True	NM_005492,NM_130794	chr20,chr20	+,-	CST8,CST11	-63,-38164
chr2:85843674-85843892	chr2	+	85843709	85843795	True	NM_006590,NM_001013649	chr2,chr2	+,-	USP39,C2orf68	-477,-4530
chr8:9965360-9966942	chr8	+	9965662	9966594	True	NM_001199729,NR_029668	chr8,chr8	+,-	MSRA,MIR124-1	-12654,-204680
chr1:235492457-235493654	chr1	+	235492538	235493504	True	NM_031371,NM_001037277,NM_016374,NR_036605,NM_004837	chr1,chr1,chr1,chr1,chr1	-,+,-,+,+	ARID4B,GGPS1,ARID4B,GGPS1,GGPS1	-1006,-836,-1006,-720,-720
chr20:44001940-44002801	chr20	+	44002041	44002781	True	NR_003189,NM_014477	chr20,chr20	+,-	SYS1-DBNDD2,TP53TG5	-10283,4226
chr19:8678948-8680223	chr19	+	8679008	8680207	True	NM_030957,NM_001004699	chr19,chr19	-,+	ADAMTS10,OR2Z1	-3420,161183
chr2:173611431-173613285	chr2	+	173611762	173612979	True	NR_026995,NM_007023	chr2,chr2	-,+	LOC91149,RAPGEF4	-10828,-11301
chr8:33878741-33880072	chr8	+	33879036	33879816	True	NM_032509,NM_024025	chr8,chr8	+,-	MAK16,DUSP26	-536410,-421597
chr2:23688351-23689850	chr2	+	23688356	23689826	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	460162,-80109
chr1:85022115-85023463	chr1	+	85022445	85022869	True	NM_004388,NR_036561	chr1,chr1	-,+	CTBS,SPATA1	17344,-50538
chr1:205770871-205771435	chr1	+	205770893	205771481	True	NM_173854,NM_181644	chr1,chr1	-,+	SLC41A1,MFSD4	10730,-232833
chr11:66406106-66406369	chr11	+	66406129	66406371	True	NM_002896,NM_001198844,NM_031492,NM_001198843	chr11,chr11,chr11,chr11	+,+,-,+	RBM4,RBM4,RBM4B,RBM4	-92,-92,38954,-92
chr17:70118573-70118935	chr17	+	70118687	70118979	True	NM_000346,NR_036488	chr17,chr17	+,-	SOX9,LOC100499467	-1578,470014
chr15:25341122-25341823	chr15	+	25341419	25341867	True	NR_003332,NR_003335,NR_003334,NR_003337,NR_003336,NR_003339,NR_003338,NM_130838,NR_003340,NR_003341,NR_001290,NR_003360,NR_003361	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,-,+,+,+,+,+	SNORD116-17,SNORD116-21,SNORD116-20,SNORD116-23,SNORD116-22,SNORD116-25,SNORD116-24,UBE3A,SNORD116-26,SNORD116-27,SNORD116-19,SNORD116-29,SNORD116-28	-9809,-7532,-8674,-4550,-6413,941,-2299,308842,2777,4853,-9809,9799,7920
chr3:46065532-46065760	chr3	+	46065599	46065809	True	NM_005283,NM_001024644,NM_006564	chr3,chr3,chr3	-,-,+	XCR1,XCR1,CXCR6	3220,3220,-80684
chr3:149197595-149197890	chr3	+	149197670	149197920	True	NM_004617,NM_014220	chr3,chr3	+,-	TM4SF4,TM4SF1	-5353,-102102
chr3:169756198-169756563	chr3	+	169756348	169756612	True	NM_014373,NR_024409	chr3,chr3	+,-	GPR160,LOC100128164	-672,-71826
chr19:55866681-55867069	chr19	+	55866869	55867079	True	NM_144613,NM_032701,NM_001145402	chr19,chr19,chr19	-,+,-	COX6B2,SUV420H2,FAM71E2	-687,-15700,7591
chr19:48972111-48972347	chr19	+	48972115	48972347	True	NM_017457,NM_004228,NM_001080434,NM_170720	chr19,chr19,chr19,chr19	+,+,-,+	CYTH2,CYTH2,LMTK3,KCNJ14	117,117,44149,-7660
chr10:118765999-118766679	chr10	+	118766116	118766645	True	NM_018330,NM_181840,NM_001127211	chr10,chr10,chr10	-,+,-	KIAA1598,KCNK18,KIAA1598	-1028,190354,-1028
chr19:40340833-40341292	chr19	+	40340867	40341027	True	NM_001143832,NM_001436	chr19,chr19	+,-	LEUTX,FBL	-73684,-3813
chr2:23636355-23636630	chr2	+	23636356	23636676	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	513308,-28115
chr1:1354723-1354954	chr1	+	1354807	1354953	True	NR_026871,NM_001146685,NM_001145210	chr1,chr1,chr1	-,+,-	LOC441869,TMEM88B,LOC441869	1747,6554,1747
chr7:131401058-131402638	chr7	+	131401896	131402446	True	NM_005397,NM_013255	chr7,chr7	-,+	PODXL,MKLN1	-160520,-389357
chr6:1313216-1313599	chr6	+	1313347	1313481	True	NM_033260,NR_027116	chr6,chr6	+,-	FOXQ1,LOC285768	-723,-211780
chr6:13571304-13573185	chr6	+	13571402	13573221	True	NM_018988,NM_012241,NM_031244,NM_001193267	chr6,chr6,chr6,chr6	-,+,+,+	GFOD1,SIRT5,SIRT5,SIRT5	-83615,1653,1570,1570
chr13:32421263-32423004	chr13	+	32421328	32422880	True	NR_027062,NM_001136571	chr13,chr13	+,-	EEF1DP3,ZAR1L	-459,463261
chr7:17061013-17061442	chr7	+	17061018	17061478	True	NM_176813,NM_014399	chr7,chr7	-,+	AGR3,TSPAN13	-139405,-267718
chr3:112738620-112739832	chr3	+	112738666	112739576	True	NM_015412,NR_027794,NR_027796,NM_138485	chr3,chr3,chr3,chr3	-,-,-,+	C3orf17,C3orf17,C3orf17,GTPBP8	-111,-111,-111,-28917
chr13:32885649-32886869	chr13	+	32885846	32886625	True	NM_000059,NM_001136571	chr13,chr13	+,-	BRCA2,ZAR1L	2991,19
chr9:115772081-115772987	chr9	+	115772080	115772808	True	NM_001101338,NR_024366	chr9,chr9	-,+	ZNF883,NCRNA00256A	1730,102367
chr1:26148136-26149544	chr1	+	26148338	26149360	True	NM_019557,NR_024498,NM_001099625,NM_001099627,NM_001099626	chr1,chr1,chr1,chr1,chr1	+,-,+,+,+	FAM54B,LOC646471,FAM54B,FAM54B,FAM54B	-1705,787,-1992,-1992,-1070
chr15:25201627-25201828	chr15	+	25201658	25201848	True	NM_003097,NM_022804,NM_130838,NM_005678	chr15,chr15,chr15,chr15	+,+,-,+	SNRPN,SNURF,UBE3A,SNURF	-1574,-1639,448855,-1574
chr20:44099010-44099238	chr20	+	44099072	44099134	True	NM_006103,NM_006652	chr20,chr20	+,-	WFDC2,SPINT3	-729,45180
chr15:83379299-83379759	chr15	+	83379471	83379802	True	NR_034139,NM_004644,NR_003011	chr15,chr15,chr15	-,-,+	LOC338963,AP3B2,SCARNA15	2993,-836,44894
chr18:46477104-46477385	chr18	+	46477362	46477424	True	NM_001190823,NM_001190822,NM_001190821,NM_005904,NM_014772	chr18,chr18,chr18,chr18,chr18	-,-,-,-,+	SMAD7,SMAD7,SMAD7,SMAD7,CTIF	-8185,-1659,-281,-281,-411986
chr22:24316480-24316787	chr22	+	24316573	24316833	True	NM_001084393,NM_001355,NM_000854,NM_001084392	chr22,chr22,chr22,chr22	+,-,+,-	DDTL,DDT,GSTT2,DDT	-7598,5236,5480,-67
chr22:24316480-24316787	chr22	-	24308872	24309132	False	NM_000854,NM_001080843,NM_001084393,NM_001084392	chr22,chr22,chr22,chr22	-,-,+,-	GSTT2,GSTT2B,DDTL,DDT	-5479,-5504,67,7598
chr11:5350518-5351173	chr11	+	5350665	5350968	True	NM_033180,NM_001004750	chr11,chr11	-,+	OR51B2,OR51B6	-5083,21769
chr16:85783867-85784163	chr16	+	85783994	85784150	True	NR_031731,NM_001861,NM_206967	chr16,chr16,chr16	-,+,-	MIR1910,COX4I1,C16orf74	-8688,49022,589
chr12:122020659-122020958	chr12	+	122020738	122020987	True	NM_032590,NM_032790,NM_001005366	chr12,chr12,chr12	-,+,-	KDM2B,ORAI1,KDM2B	-1818,43467,-2374
chr13:108915912-108917704	chr13	+	108916139	108917718	True	NM_006573,NM_001145645,NM_001098268	chr13,chr13,chr13	+,+,-	TNFSF13B,TNFSF13B,LIG4	4258,4258,-45423
chr5:149536012-149536730	chr5	+	149536108	149536434	True	NM_001804,NM_002609	chr5,chr5	+,-	CDX1,PDGFRB	9909,-686
chr2:65453273-65454600	chr2	+	65453405	65454450	True	NM_001005386,NM_005722,NM_015543	chr2,chr2,chr2	+,+,-	ACTR2,ACTR2,RAB1A	378,378,-95970
chr17:7385608-7386336	chr17	+	7385608	7386296	True	NM_000937,NM_020899,NM_001128833,NM_001102614	chr17,chr17,chr17,chr17	+,-,-,+	POLR2A,ZBTB4,ZBTB4,AMAC1L3	1401,1322,-2664,-938
chr15:78422950-78423199	chr15	+	78423063	78423231	True	NM_006383,NM_005530	chr15,chr15	-,+	CIB2,IDH3A	697,18487
chr5:135232471-135234346	chr5	+	135232633	135234235	True	NM_000590,NM_012159	chr5,chr5	-,+	IL9,FBXL21	-1117,31770
chr22:20850283-20851284	chr22	+	20850417	20851203	True	NM_001003891,NR_033825,NM_032775	chr22,chr22,chr22	+,-,-	MED15,KLHL22,KLHL22	10682,-247,-247
chr18:55024272-55024672	chr18	+	55024272	55024711	True	NM_015879,NM_000140	chr18,chr18	+,-	ST8SIA3,FECH	-4610,229317
chr2:231279914-231280679	chr2	+	231279988	231280696	True	NM_001185015,NM_001080391,NM_003113	chr2,chr2,chr2	-,+,+	SP110,SP100,SP100	-189544,174,174
chr2:231279914-231280679	chr2	+	231190953	231191006	False	NM_138402,NM_001185015	chr2,chr2	+,-	SP140L,SP110	887,-100509
chr13:111356962-111357569	chr13	+	111357221	111357539	True	NM_198218,NM_198219,NM_005537,NM_024537,NM_198217	chr13,chr13,chr13,chr13,chr13	+,+,+,-,+	ING1,ING1,ING1,CARS2,ING1	8070,8085,9819,991,7543
chr21:37535392-37536081	chr21	+	37535677	37536086	True	NM_017438,NM_005128	chr21,chr21	-,+	SETD4,DOPEY2	-102861,752
chr1:8023728-8025021	chr1	+	8023820	8025052	True	NM_001561,NM_007262,NM_001123377	chr1,chr1,chr1	-,+,+	TNFRSF9,PARK7,PARK7	-20595,-2159,-2159
chr12:56474355-56475062	chr12	+	56474360	56474976	True	NM_001982,NM_001130420,NM_001005915	chr12,chr12,chr12	+,-,+	ERBB3,SMARCC2,ERBB3	-602,108425,-519
chr3:178781862-178783617	chr3	+	178781878	178783300	True	NM_152240,NM_022470,NM_006218	chr3,chr3,chr3	-,-,+	ZMAT3,ZMAT3,PIK3CA	6419,6419,83010
chr14:64747002-64747649	chr14	+	64747001	64747369	True	NM_182910,NM_001040275	chr14,chr14	+,-	SYNE2,ESR2	-64388,13809
chr7:51385239-51385667	chr7	+	51385271	51385569	True	NM_015198,NR_033845	chr7,chr7	-,+	COBL,LOC100129427	-756,-785865
chr3:192958392-192958795	chr3	+	192958537	192958743	True	NR_026877,NM_020386,NM_198505	chr3,chr3,chr3	+,+,-	MGC2889,HRASLS,ATP13A5	824,174,137821
chr10:90772228-90772548	chr10	+	90772337	90772587	True	NR_028036,NR_028371	chr10,chr10	+,-	FAS,FAS-AS1	-22108,-19605
chr11:803779-803979	chr11	+	803783	803965	True	NM_145887,NM_145886,NM_024698,NM_001191060,NM_001191061,NM_001004,NR_002585	chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,-,+,+	LRDD,LRDD,SLC25A22,SLC25A22,SLC25A22,RPLP2,SNORA52	1335,1335,-7520,-5788,-5514,5970,7715
chr7:23154810-23155302	chr7	+	23154810	23155147	True	NR_033329,NR_033328,NM_018846,NM_001172428,NM_032581,NM_001031710	chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,-,+	KLHL7,KLHL7,KLHL7,KLHL7,FAM126A,KLHL7	-9512,-9512,-8948,-9512,-101040,-9512
chr9:5185757-5186167	chr9	+	5185910	5186216	True	NM_007179,NM_002195	chr9,chr9	-,+	INSL6,INSL4	-292,45202
chr19:36605730-36606022	chr19	+	36605903	36606061	True	NM_006233,NM_001281	chr19,chr19	-,+	POLR2I,TBCB	195,-66
chr11:74445265-74445975	chr11	+	74445696	74445922	True	NM_015424,NM_001098638	chr11,chr11	-,+	CHRDL2,RNF169	-3510,13990
chr8:41349906-41351859	chr8	+	41350445	41351697	True	NM_001174124,NM_016099,NM_152568,NM_001002296	chr8,chr8,chr8,chr8	+,+,-,+	GOLGA7,GOLGA7,NKX6-3,GOLGA7	-2429,-2429,153240,-2337
chr12:108535171-108536746	chr12	+	108535389	108536507	True	NM_014653,NM_001142345	chr12,chr12	+,-	WSCD2,CMKLR1	-11929,177983
chr16:57521519-57523467	chr16	+	57521584	57523093	True	NM_018110,NM_032940	chr16,chr16	-,+	DOK4,POLR2C	-1199,-25084
chr8:17559660-17560365	chr8	+	17559710	17560336	True	NM_020749,NM_006207	chr8,chr8	-,+	MTUS1,PDGFRL	-4464,-125830
chr6:100911893-100912114	chr6	+	100911920	100912160	True	NM_021620,NM_005068	chr6,chr6	+,-	PRDM13,SIM1	-857321,-369
chr2:29115688-29116395	chr2	+	29115791	29116185	True	NM_017910,NM_015131	chr2,chr2	-,+	TRMT61B,WDR43	-22616,1347
chr19:17624841-17625391	chr19	+	17624856	17625147	True	NM_012088,NM_001098524,NM_173544,NM_138454	chr19,chr19,chr19,chr19	+,+,+,-	PGLS,FAM129C,FAM129C,NXNL1	-2475,8962,8962,-53131
chr11:119206797-119207016	chr11	+	119206897	119207013	True	NM_015645,NM_032015	chr11,chr11	-,+	C1QTNF5,RNF26	10420,-1711
chr6:30860212-30860864	chr6_qbl_hap6	+	2153273	2153771	False	NM_013993,NM_001202521,NM_001202522,NM_001202523,NM_013994,NM_001954,NM_205854	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	+,+,+,+,+,+,-	DDR1,DDR1,DDR1,DDR1,DDR1,DDR1,SFTA2	-8010,-3872,-3872,-7580,-3872,-8476,39202
chr6:30860212-30860864	chr6_dbb_hap3	+	2154402	2154900	False	NM_013993,NM_001202521,NM_001202522,NM_001202523,NM_013994,NM_001954,NM_205854	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	+,+,+,+,+,+,-	DDR1,DDR1,DDR1,DDR1,DDR1,DDR1,SFTA2	-8024,-3886,-3886,-7594,-3886,-8490,39212
chr6:30860212-30860864	chr6_mann_hap4	+	2208365	2208863	False	NM_013993,NM_001202521,NM_001202522,NM_001202523,NM_013994,NM_001954,NM_205854	chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4	+,+,+,+,+,+,-	DDR1,DDR1,DDR1,DDR1,DDR1,DDR1,SFTA2	-8004,-3866,-3866,-7574,-3866,-8470,39220
chr6:30860212-30860864	chr6	+	30860284	30860782	True	NM_013993,NM_001202521,NM_001202522,NM_001202523,NM_013994,NM_001954,NM_205854	chr6,chr6,chr6,chr6,chr6,chr6,chr6	+,+,+,+,+,+,-	DDR1,DDR1,DDR1,DDR1,DDR1,DDR1,SFTA2	-8008,-3870,-3870,-7578,-3870,-8474,39220
chr6:30860212-30860864	chr6_cox_hap2	+	2372384	2372882	False	NM_013993,NM_001202521,NM_001202522,NM_001202523,NM_013994,NM_001954,NM_205854	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,+,+,+,+,+,-	DDR1,DDR1,DDR1,DDR1,DDR1,DDR1,SFTA2	-8010,-3872,-3872,-7580,-3872,-8476,39043
chr13:20802916-20803379	chr13	+	20802916	20803192	True	NM_001110221,NM_001110219,NM_001190965,NM_006783,NM_001110220	chr13,chr13,chr13,chr13,chr13	-,-,+,-,-	GJB6,GJB6,ZMYM2,GJB6,GJB6	3400,3400,-270004,2238,3400
chr20:23065703-23065953	chr20	+	23065774	23065986	True	NM_001052,NM_012072	chr20,chr20	+,-	SSTR4,CD93	-49768,1041
chr12:107713692-107713979	chr12	+	107713719	107714017	True	NM_001018072,NM_004075	chr12,chr12	+,-	BTBD11,CRY1	-1573,-226121
chr12:123254144-123254394	chr12	+	123254382	123254446	True	NM_032554,NM_201435,NM_032573,NR_027918	chr12,chr12,chr12,chr12	-,+,+,+	GPR81,CCDC62,CCDC62,CCDC62	-39253,4626,4626,4626
chr6:14689318-14690292	chr6	+	14689335	14690086	True	NM_001031713,NM_004973	chr6,chr6	-,+	CCDC90A,JARID2	-874546,556440
chr4:87268818-87269434	chr4	+	87268824	87269454	True	NM_006264,NM_138980	chr4,chr4	+,-	PTPN13,MAPK10	246013,11971
chr5:171707027-171708356	chr5	+	171707139	171708301	True	NM_001171183,NM_152277	chr5,chr5	+,-	EFCAB9,UBTD2	-86024,2553
chr16:29276785-29277899	chr16	+	29276863	29277929	True	NR_002939,NM_001031827	chr16,chr16	+,-	RUNDC2C,BOLA2	24611,188406
chr16:29276785-29277899	chr16	+	88272625	88273736	False	NM_001127464,NM_001739	chr16,chr16	+,-	ZNF469,CA5A	220142,-302513
chr9:20679055-20680236	chr9	+	20679198	20680064	True	NM_004529,NM_017794	chr9,chr9	-,+	MLLT3,KIAA1797	-56684,-20946
chr14:52788874-52790738	chr14	+	52790289	52790747	True	NM_000956,NM_001160047	chr14,chr14	+,-	PTGER2,TXNDC16	-9331,228604
chr4:42950865-42951098	chr4	+	42950924	42951104	True	NM_001080476,NM_006095	chr4,chr4	+,-	GRXCR1,ATP8A1	-55702,-291802
chr3:196591871-196592831	chr3	+	196592103	196592781	True	NM_152699,NM_001042540	chr3,chr3	+,-	SENP5,NCBP2	1945,76733
chr16:30419209-30420386	chr16	+	30419603	30420085	True	NM_024096,NM_001142305,NM_016643	chr16,chr16,chr16	-,+,+	DCTPP1,ZNF771,ZNF771	21338,-919,-919
chr2:24297853-24298925	chr2	+	24298112	24298825	True	NM_147184,NM_054033,NM_004881,NM_016047	chr2,chr2,chr2,chr2	-,+,-,-	TP53I3,FKBP1B,TP53I3,SF3B14	8880,-25591,8953,539
chr19:55270368-55270568	chr19	+	55270400	55270614	True	NM_014218,NM_001127255	chr19,chr19	+,-	KIR2DL1,NLRP7	10650,188309
chr19:55270368-55270568	chr19	+	55253764	55253814	False	NM_001127255,NM_015868	chr19,chr19	-,+	NLRP7,KIR2DL3	205109,-3841
chr12:28122296-28122624	chr12	+	28122383	28122661	True	NM_020782,NM_002820,NM_198966,NM_198964,NM_198965	chr12,chr12,chr12,chr12,chr12	+,-,-,-,-	KLHDC5,PTHLH,PTHLH,PTHLH,PTHLH	-189247,2305,283,283,2305
chr16:12010069-12010417	chr16	+	12010155	12010441	True	NM_001192,NM_002094,NM_001130007,NM_001130006	chr16,chr16,chr16,chr16	+,-,-,-	TNFRSF17,GSPT1,GSPT1,GSPT1	48522,-330,128,-330
chr6:91007953-91009637	chr6	+	91008214	91009406	True	NM_021813,NM_032602,NM_001170794	chr6,chr6,chr6	-,+,-	BACH2,GJA10,BACH2	-1652,-404077,-1587
chr3:37218210-37218497	chr3	+	37218270	37218530	True	NM_017724,NM_006309,NM_001172713,NM_001134369	chr3,chr3,chr3,chr3	-,-,+,-	LRRFIP2,LRRFIP2,GOLGA4,LRRFIP2	-419,-419,66151,-419
chr2:33169405-33170788	chr2	+	33169760	33170640	True	NM_206943,NM_015475	chr2,chr2	+,-	LTBP1,FAM98A	1728,653772
chr16:212572-212797	chr16	+	212647	212837	True	NM_001077350,NM_001003938,NM_005332	chr16,chr16,chr16	-,+,+	NPRL3,HBM,HBZ	-23975,3135,-9844
chr7:24610670-24612143	chr7	+	24610751	24612174	True	NM_016447,NM_001127453	chr7,chr7	+,-	MPP6,DFNA5	910,184960
chr11:65550487-65551029	chr11	+	65550562	65550920	True	NM_138368,NM_004561	chr11,chr11	-,+	DKFZp761E198,OVOL1	-2740,3608
chr1:112297968-112298178	chr1	+	112297972	112298158	True	NM_198926,NM_007204	chr1,chr1	-,+	C1orf183,DDX20	311,31
chr19:19303447-19303664	chr19	+	19303449	19303685	True	NM_001145784,NM_005919,NM_003721,NM_001145783,NM_134440,NR_027307,NR_027308	chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,+,-,+,-,-	LOC729991,LOC729991-MEF2B,RFXANK,LOC729991,RFXANK,LOC729991-MEF2B,LOC729991-MEF2B	-49,-49,-492,-49,-492,-49,-49
chr8:99055849-99056060	chr8	+	99055928	99056028	True	NR_002581,NM_001170806,NM_000989	chr8,chr8,chr8	-,+,-	SNORA72,C8orf47,RPL30	-1483,20721,1848
chr1:156307299-156307850	chr1	+	156307306	156307790	True	NR_036564,NR_036565,NM_005998,NM_001008800,NM_144627	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	CCT3,CCT3,CCT3,CCT3,C1orf182	467,467,467,467,-252
chrX:100805787-100806341	chrX	+	100805829	100806176	True	NM_001009584,NM_016608	chrX,chrX	-,+	ARMCX6,ARMCX1	66866,-366
chr14:19552825-19553154	chr22	-	16288316	16288366	True	NR_001591,NM_001136213	chr22,chr22	+,-	psiTPTE22,POTEH	794434,-379
chr4:49296497-49296993	chr4	+	49296497	49296681	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-308283,-387682
chr6:15084968-15086177	chr6	+	15084973	15085589	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	160937,577750
chr15:42750625-42751479	chr15	+	42751004	42751403	True	NM_022473,NM_003825	chr15,chr15	-,+	ZFP106,SNAP23	-1274,36431
chr8:101664499-101666393	chr8	+	101664645	101666155	True	NR_033962,NM_152628	chr8,chr8	+,-	FLJ42969,SNX31	398126,-2752
chr12:133694690-133695849	chr12	+	133694894	133695381	True	NM_015394,NM_001191054	chr12,chr12	+,-	ZNF10,LOC647589	11832,117098
chr17:47831959-47832322	chr17	+	47832037	47832123	True	NM_030802,NM_001199155	chr17,chr17	-,+	FAM117A,MYST2	9445,33857
chr8:70404848-70405108	chr8	+	70404914	70405100	True	NM_001128205,NM_001128206,NM_001146009	chr8,chr8,chr8	+,+,-	SULF1,SULF1,SLCO5A1	-55,-55,340354
chr5:179246792-179247661	chr5	+	179246943	179247393	True	NM_014275,NM_003900	chr5,chr5	-,+	MGAT4B,SQSTM1	-12991,448
chr19:1133696-1134333	chr19	+	1133720	1134348	True	NM_001100122,NM_001039848	chr19,chr19	-,+	SBNO2,GPX4	-1447,-29122
chr17:54672307-54672551	chr17	+	54672343	54672566	True	NM_001085430,NM_005450	chr17,chr17	-,+	C17orf67,NOG	220735,-1334
chr3:18451536-18451873	chr3	+	18451535	18451898	True	NM_144633,NM_001195470	chr3,chr3	+,-	KCNH8,SATB1	738118,14981
chr15:76630517-76630798	chr15	+	76630575	76630715	True	NM_001127716,NM_145805	chr15,chr15	-,+	ETFA,ISL2	-26765,-1479
chr10:114204953-114206177	chr10	+	114205043	114206008	True	NM_022494,NM_145206	chr10,chr10	-,+	ZDHHC6,VTI1A	716,747
chr7:44240150-44240512	chr7	+	44240406	44240560	True	NM_006555,NM_000162	chr7,chr7	+,-	YKT6,GCK	17,-11384
chr16:3071140-3071450	chr16	+	3071238	3071440	True	NM_001142350,NM_024339,NM_017885,NM_001002017,NM_016639,NM_021195,NM_020982,NM_001002018	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,-,-,+,-,+,-	THOC6,THOC6,HCFC1R1,HCFC1R1,TNFRSF12A,CLDN6,CLDN9,HCFC1R1	2591,2591,2897,2897,-976,-3050,-8832,2897
chr3:183993440-183993680	chr3	+	183993543	183993649	True	NM_033259,NM_001100121,NM_001100120,NM_001037324	chr3,chr3,chr3,chr3	-,+,+,+	CAMK2N2,ECE2,ECE2,ECE2	-14292,149,149,149
chr19:29399258-29401043	chr19	+	29399618	29400876	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	55161,303310
chr19:53796842-53797418	chr19	+	53796842	53797110	True	NM_001195187,NM_033341	chr19,chr19	+,-	LOC646508,BIRC8	-12087,-1967
chr16:69372070-69372359	chr16	+	69372264	69372388	True	NM_022341,NM_001199434,NM_016101,NM_032382	chr16,chr16,chr16,chr16	-,+,+,-	PDF,NIP7,NIP7,COG8	-7766,1026,1026,1194
chr2:75061603-75061871	chr2	+	75061674	75061910	True	NM_138804,NM_000189	chr2,chr2	-,+	C2orf65,HK2	-186510,-1943
chr11:62932845-62934448	chr11	+	62932848	62934246	True	NM_001039752,NM_001136506	chr11,chr11	+,-	SLC22A10,SLC22A24	123183,-21155
chr20:25726315-25727148	chr20	+	25726398	25727046	True	NR_004846,NM_015655	chr20,chr20	+,-	LOC100134868,ZNF337	263388,-48929
chrX:103217145-103217438	chrX	+	103217183	103217463	True	NM_194324,NM_001002916	chrX,chrX	+,-	TMSB15B,H2BFWT	-34,50843
chr1:19992983-19993375	chr1	+	19993048	19993358	True	NM_181719,NM_000871	chr1,chr1	-,+	TMCO4,HTR6	133102,-1319
chr8:67986222-67987307	chr8	+	67986315	67987350	True	NM_024790,NM_006837	chr8,chr8	+,-	CSPP1,COPS5	-9775,-11753
chr10:99080055-99080408	chr10	+	99080141	99080443	True	NM_005479,NM_012083	chr10,chr10	+,-	FRAT1,FRAT2	-1171,14065
chr6:135375820-135376361	chr6	+	135375867	135376363	True	NM_001145158,NM_005375,NM_001145207,NM_006620	chr6,chr6,chr6,chr6	-,+,-,-	HBS1L,MYB,HBS1L,HBS1L	69,126089,69,69
chr5:5137132-5137917	chr5	+	5137243	5137725	True	NM_139056,NR_028351	chr5,chr5	+,-	ADAMTS16,FLJ33360	2717,1199730
chr8:87670312-87670536	chr8	+	87670394	87670574	True	NM_019098,NM_003909	chr8,chr8	-,+	CNGB3,CPNE3	85379,-143789
chr16:70332030-70332975	chr16	+	70332574	70332980	True	NM_001014451,NM_001605,NM_007242,NM_001014449	chr16,chr16,chr16,chr16	+,-,+,+	DDX19B,AARS,DDX19B,DDX19B	91,-9162,91,91
chr14:91524535-91525387	chr14	+	91524801	91525367	True	NM_182398,NM_004755,NM_001102366	chr14,chr14,chr14	-,-,+	RPS6KA5,RPS6KA5,C14orf159	1676,1676,54989
chr4:114851811-114852771	chr4	+	114852456	114852810	True	NM_001128174,NM_024590	chr4,chr4	+,-	UGT8,ARSJ	666800,48118
chr11:111412946-111413384	chr11	+	111412970	111413330	True	NM_178834,NM_017589	chr11,chr11	+,-	LAYN,BTG4	-1788,-29906
chr5:43191877-43192195	chr5	+	43191928	43192218	True	NM_153361,NM_001098272	chr5,chr5	+,-	MGC42105,HMGCS1	108,121427
chr15:95995365-95996157	chr15	+	95995366	95995936	True	NR_027133,NR_034095	chr15,chr15	+,-	LOC145820,LOC400456	-19095,-125037
chr10:112838843-112839065	chr10	+	112838912	112839100	True	NR_026715,NM_000681	chr10,chr10	-,+	RPL13AP6,ADRA2A	-141899,-2173
chr7:140714144-140714745	chr7	+	140714144	140714642	True	NM_016071,NM_053035,NM_001195278	chr7,chr7,chr7	-,-,+	MRPS33,MRPS33,LOC100131199	-3,189,59389
chr7:151740787-151742051	chr7	+	151740845	151741935	True	NM_022087,NM_016203	chr7,chr7	+,-	GALNT11,PRKAG2	-18118,-166529
chr21:48018353-48018570	chr21	+	48018510	48018570	True	NM_001535	chr21	+	PRMT2	36956
chr5:36876075-36876314	chr5	+	36876127	36876327	True	NM_133433,NM_015384,NM_023073	chr5,chr5,chr5	+,+,-	NIPBL,NIPBL,C5orf42	533,533,373253
chr16:89895917-89896501	chr16	+	89895961	89896535	True	NM_032451,NM_001018112	chr16,chr16	+,-	SPIRE2,FANCA	-1105,-12896
chr2:29204783-29206012	chr2	+	29205018	29205631	True	NM_199280,NM_001029883	chr2,chr2	+,-	FAM179A,C2orf71	-905,91547
chr5:140781177-140782334	chr5	+	140781286	140782381	True	NM_018925,NM_018926,NM_018921,NM_032099,NM_032088,NM_032089,NM_032100,NM_005642,NM_014004	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,+,-,+	PCDHGB5,PCDHGB6,PCDHGA9,PCDHGB5,PCDHGA8,PCDHGA9,PCDHGB6,TAF7,PCDHGA8	-3650,5388,138,-3650,-9862,138,5388,-80935,-9862
chr15:89016040-89016947	chr15	+	89016058	89016853	True	NM_022163,NM_022839,NM_176805	chr15,chr15,chr15	-,+,+	MRPL46,MRPS11,MRPS11	-5425,-5425,-5425
chr8:74205631-74205855	chr8	+	74205636	74205904	True	NM_000971,NM_172037	chr8,chr8	-,+	RPL7,RDH10	15,1360
chr1:46932574-46932813	chr1	+	46932595	46932859	True	NM_147192,NM_001097611	chr1,chr1	+,-	DMBX1,KNCN	39808,84078
chr3:161089994-161090283	chr3	+	161089998	161090330	True	NM_001080440,NM_001040100	chr3,chr3	+,-	OTOL1,C3orf57	124265,-127
chr17:33775667-33775915	chr17	+	33775733	33775945	True	NM_144682,NR_003037	chr17,chr17	-,+	SLFN13,SNORD7	-23,124730
chr4:42400929-42401188	chr4	+	42400942	42401177	True	NM_207406,NM_001080505	chr4,chr4	-,+	BEND4,SHISA3	-246047,-1137
chr20:3023230-3023678	chr20	+	3023235	3023619	True	NM_001501,NM_178331,NM_000490,NM_178332,NM_030811	chr20,chr20,chr20,chr20,chr20	+,+,-,+,+	GNRH2,GNRH2,AVP,GNRH2,MRPS26	648,648,41801,648,3055
chr17:79352170-79353089	chr17	+	79352493	79353057	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	20482,-48019
chr9:19028296-19029386	chr9	+	19028697	19029206	True	NM_153707,NM_006570	chr9,chr9	-,+	FAM154A,RRAGA	4100,20165
chr3:170137929-170138142	chr3	+	170137944	170138160	True	NM_005602,NM_020949,NM_001185056	chr3,chr3,chr3	+,-,+	CLDN11,SLC7A14,CLDN11	-1350,165753,867
chr20:53115564-53115935	chr20	+	53115610	53115983	True	NM_018431,NM_001128915	chr20,chr20	+,-	DOK5,CYP24A1	-23396,-325094
chr20:44173295-44174940	chr20	+	44173335	44174891	True	NM_020398,NM_080827,NM_006103,NM_001198986	chr20,chr20,chr20,chr20	-,-,+,-	SPINLW1,WFDC6,WFDC2,SPINLW1-WFDC6	1224,-5201,-75000,1224
chr5:94742508-94744174	chr5	+	94742596	94744222	True	NM_024717,NM_152548	chr5,chr5	-,+	MCTP1,FAM81B	-122317,-15601
chr19:37064669-37064999	chr19	+	37064725	37064959	True	NM_020951,NM_032825	chr19,chr19	-,+	ZNF529,ZNF382	-528,31261
chr15:25430321-25430630	chr15	+	25430363	25430517	True	NR_003358,NR_003296,NR_003298,NR_003305,NR_003344,NR_003351,NR_003299,NM_130838,NR_003300,NR_003301,NR_003302,NR_003303,NR_003304,NR_003297,NR_003306	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,-,+,+,+,+,+,+,+	SNORD115-43,SNORD115-4,SNORD115-6,SNORD115-13,SNORD115-29,SNORD115-36,SNORD115-7,UBE3A,SNORD115-8,SNORD115-9,SNORD115-10,SNORD115-11,SNORD115-12,SNORD115-5,SNORD115-14	4043,-8435,-4770,7950,4043,4043,-2882,220186,-961,260,260,4043,260,263,9550
chr3:122294647-122296611	chr3	+	122295059	122296623	True	NM_031458,NM_001113523	chr3,chr3	-,+	PARP9,PARP15	-11536,-7
chr20:47443318-47443790	chr20	+	47443426	47443810	True	NM_006420,NM_020820	chr20,chr20	+,-	ARFGEF2,PREX1	94464,660
chr5:142149492-142149846	chr5	+	142149617	142149873	True	NM_015071,NM_001135608,NR_026696	chr5,chr5,chr5	+,+,-	ARHGAP26,ARHGAP26,FGF1	418,418,-71982
chr7:752519-752948	chr7	+	752646	752945	True	NM_001164762,NM_001164761,NM_002735,NM_017802	chr7,chr7,chr7,chr7	-,-,-,+	PRKAR1B,PRKAR1B,PRKAR1B,HEATR2	-69,-41,-485,13392
chr1:114302235-114303264	chr1	+	114302334	114303091	True	NR_037864,NM_006608	chr1,chr1	+,-	LOC100287722,PHTF1	96165,-557
chr3:196467572-196467915	chr3	+	196467589	196467959	True	NM_032898,NM_002577	chr3,chr3	-,+	C3orf34,PAK2	-28466,-912
chr11:47587957-47588812	chr11	+	47588187	47588579	True	NM_001143984,NM_175732,NM_016506	chr11,chr11,chr11	+,+,-	PTPMT1,PTPMT1,KBTBD4	-1256,-1256,12000
chr1:78511208-78511576	chr1	+	78511281	78511561	True	NM_003902,NM_017655	chr1,chr1	-,+	FUBP1,GIPC2	-66504,27
chr6:74072441-74072773	chr6	+	74072451	74072729	True	NM_001080507,NM_001025290,NM_001017361	chr6,chr6,chr6	-,-,+	OOEP,DPPA5,C6orf221	6836,-8452,-102
chr9:123477829-123478056	chr9	+	123477858	123477948	True	NR_027442,NM_001080497	chr9,chr9	+,-	LOC100288842,MEGF9	77826,-1093
chr20:1629019-1629905	chr20	+	1629026	1629796	True	NM_018556,NM_080816,NM_001039508,NM_001040022	chr20,chr20,chr20,chr20	-,-,-,+	SIRPG,SIRPG,SIRPG,SIRPA	8679,8679,8679,245016
chr2:1415129-1415391	chr2	+	1415171	1415419	True	NM_175721,NM_175719,NM_012293,NM_175722,NM_000547	chr2,chr2,chr2,chr2,chr2	+,+,-,+,+	TPO,TPO,PXDN,TPO,TPO	2760,1813,332922,2760,1813
chr16:30077730-30077989	chr16	+	30077808	30077882	True	NM_002720,NM_004608,NM_184043,NM_184041,NM_001127617	chr16,chr16,chr16,chr16,chr16	+,-,+,+,+	PPP4C,TBX6,ALDOA,ALDOA,ALDOA	9501,25373,-2259,-815,-1886
chr1:38156098-38156466	chr1	+	38156113	38156497	True	NM_017850,NM_018101	chr1,chr1	-,+	C1orf109,CDCA8	-51,1661
chr19:712181-712450	chr19	+	712320	712392	True	NM_214710,NM_002579,NM_001040134	chr19,chr19,chr19	-,+,+	PRSS57,PALM,PALM	-16859,-3418,-3418
chr15:28342960-28343743	chr15	+	28343290	28343724	True	NM_000275,NR_033351	chr15,chr15	-,+	OCA2,GOLGA8F	784,280059
chr7:2879556-2880876	chr7	+	2879716	2880782	True	NM_133463,NM_007353	chr7,chr7	+,-	AMZ1,GNA12	-160604,3238
chr5:79281097-79282982	chr5	+	79281135	79282836	True	NM_003248,NM_001010891,NM_001167741	chr5,chr5,chr5	+,-,-	THBS4,MTX3,MTX3	48333,4302,4302
chr19:18723762-18724171	chr19	+	18723888	18724218	True	NM_012109,NM_004750	chr19,chr19	+,-	TMEM59L,CRLF1	-257,-6228
chr7:55916459-55916873	chr7	+	55916588	55916757	True	NM_182633,NM_207366	chr7,chr7	+,-	ZNF713,SEPT14	63573,13776
chr19:48971848-48972111	chr19	+	48971943	48972149	True	NM_017457,NM_004228,NM_001080434,NM_170720	chr19,chr19,chr19,chr19	+,+,-,+	CYTH2,CYTH2,LMTK3,KCNJ14	315,315,44347,-7488
chr7:93203759-93204007	chr7	+	93203805	93203955	True	NM_001164737,NM_001742,NM_021955	chr7,chr7,chr7	-,-,+	CALCR,CALCR,GNGT1	143,143,331864
chr20:3217089-3217311	chr20	+	3217250	3217310	True	NM_001174090,NM_001174089,NM_032034,NM_181493	chr20,chr20,chr20,chr20	-,-,-,+	SLC4A11,SLC4A11,SLC4A11,ITPA	1575,2627,1113,-27248
chr21:40754139-40754967	chr21	+	40754301	40754854	True	NM_004627,NM_004965,NM_001146218	chr21,chr21,chr21	+,-,+	WRB,HMGN1,WRB	-2141,-33254,4837
chr4:17512817-17513214	chr4	+	17512887	17513229	True	NM_000320,NM_001079827	chr4,chr4	-,+	QDPR,CLRN2	678,3558
chr19:55592257-55592767	chr19	+	55592306	55592506	True	NM_133180,NM_138412,NM_017729	chr19,chr19,chr19	+,-,+	EPS8L1,RDH13,EPS8L1	-5136,-11392,-597
chr20:58178299-58178546	chr20	+	58178403	58178585	True	NM_080672,NM_014258	chr20,chr20	+,-	PHACTR3,SYCP2	1017,328674
chr2:86254033-86254533	chr2	+	86254286	86254482	True	NM_017952,NR_026984	chr2,chr2	+,-	PTCD3,LOC90784	78822,-3295
chr6:15040878-15041330	chr6	+	15041039	15041139	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	205387,622208
chr2:111334488-111334708	chr2	+	111334488	111334700	True	NM_001142807,NM_001037866,NM_001123363,NM_032260,NM_005054	chr2,chr2,chr2,chr2,chr2	+,-,-,-,-	ACOXL,RGPD6,RGPD6,RGPD5,RGPD5	155449,1659,1659,1659,28
chr2:111334488-111334708	chr2	-	110551943	110552155	False	NM_178584,NM_001123363,NM_001037866,NM_032260,NM_005054	chr2,chr2,chr2,chr2,chr2	-,+,+,+,+	SEPT10,RGPD6,RGPD6,RGPD5,RGPD5	-180160,-1659,-1659,-1659,-28
chr2:111334488-111334708	chr2	+	113190975	113191129	False	NM_153712,NM_001164463,NM_005054	chr2,chr2,chr2	+,-,-	TTL,RGPD8,RGPD5	48613,143,28
chr14:89883928-89884134	chr14	+	89884094	89884168	True	NR_036500,NM_005197	chr14,chr14	+,-	LOC400236,FOXN3	-447,-640
chrX:148676448-148677037	chrX	+	148676471	148676877	True	NM_016153,NM_005365,NM_001164415,NM_001171909,NM_001080790	chrX,chrX,chrX,chrX,chrX	-,-,-,+,-	HSFX1,MAGEA9,HSFX2,CXorf40A,MAGEA9B	147,-7362,147,-50456,-7355
chrX:148676448-148677037	chrX	-	148855822	148856228	False	NM_016153,NM_032508,NM_005365,NM_001164415,NM_001080790	chrX,chrX,chrX,chrX,chrX	+,-,+,+,+	HSFX1,TMEM185A,MAGEA9,HSFX2,MAGEA9B	-147,-142335,7371,-147,7364
chr22:22305040-22306012	chr22	+	22305421	22305719	True	NM_148176,NM_014634	chr22,chr22	+,-	PPIL2,PPM1F	-285210,1581
chr11:32063024-32064375	chr11	+	32063023	32064227	True	NM_001127612,NM_002901	chr11,chr11	-,+	PAX6,RCN1	-223514,48249
chr5:135288600-135290286	chr5	+	135288600	135290301	True	NM_002302,NM_012159	chr5,chr5	-,+	LECT2,FBXL21	477,-22645
chr15:89089994-89090789	chr15	+	89089996	89090344	True	NM_001144074,NR_031590,NR_026645,NM_017996	chr15,chr15,chr15,chr15	-,+,-,-	DET1,MIR1179,DET1,DET1	-84,60993,-84,-84
chr11:47398908-47399489	chr11	+	47398954	47399366	True	NM_003120,NM_001128225,NM_001080547	chr11,chr11,chr11	-,+,-	SPI1,SLC39A13,SPI1	811,30679,811
chr5:140569678-140570095	chr5	+	140570075	140570153	True	NM_031947,NM_020957,NM_019119,NM_018930,NM_018931	chr5,chr5,chr5,chr5,chr5	-,+,+,+,+	SLC25A2,PCDHB16,PCDHB9,PCDHB10,PCDHB11	113519,-9150,-3237,1798,9194
chr1:219373115-219374199	chr1	+	219373421	219374053	True	NM_138794,NM_018713	chr1,chr1	+,-	LYPLAL1,SLC30A10	-26280,727990
chr18:3350964-3351940	chr18	+	3351170	3351710	True	NM_019856,NM_174886	chr18,chr18	-,+	MYOM1,TGIF1	-131064,60361
chr14:20774099-20775335	chr14	+	20774141	20774839	True	NM_001042618,NM_138376	chr14,chr14	+,-	PARP2,TTC5	36933,12
chr7:95215597-95216741	chr7	+	95215879	95216787	True	NM_016116,NM_002612	chr7,chr7	+,-	ASB4,PDK4	-100723,9188
chr17:7306505-7307066	chr17	+	7306514	7307022	True	NM_152766,NR_037719,NM_020795,NM_001201576,NM_020360	chr17,chr17,chr17,chr17,chr17	-,-,+,-,-	C17orf61,C17orf61-PLSCR3,NLGN2,PLSCR3,PLSCR3	478,478,4479,-8352,-8352
chr1:208084510-208084793	chr1	+	208084555	208084729	True	NM_001773,NM_001025109,NR_026817	chr1,chr1,chr1	-,-,+	CD34,CD34,LOC148696	4,4,-92882
chr1:156306083-156306915	chr1	+	156306114	156306808	True	NR_036564,NR_036565,NM_005998,NM_001008800,NM_144627	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	CCT3,CCT3,CCT3,CCT3,C1orf182	1449,1449,1449,1449,296
chrX:110232263-110233296	chrX	+	110232263	110233339	True	NM_001128167,NM_001143983	chrX,chrX	+,-	PAK3,CHRDL1	-44802,-192977
chr5:137474684-137475011	chr5	+	137474688	137475058	True	NM_003551,NM_005733	chr5,chr5	-,+	NME5,KIF20A	124,39358
chr11:72930027-72931179	chr11	+	72930036	72930858	True	NM_014824,NM_002564,NM_176071,NM_176072	chr11,chr11,chr11,chr11	-,+,+,+	FCHSD2,P2RY2,P2RY2,P2RY2	-76893,-743,-585,-743
chr19:52642612-52642832	chr19	+	52642613	52642837	True	NM_014225,NM_178523	chr19,chr19	+,-	PPP2R1A,ZNF616	50217,404
chr3:132151342-132152777	chr3	+	132151610	132152739	True	NM_032169,NM_015268	chr3,chr3	-,+	ACAD11,DNAJC13	226296,-15108
chr10:95325026-95326257	chr10	+	95325225	95326137	True	NM_001195755,NM_181745,NM_006744	chr10,chr10,chr10	+,+,-	O3FAR1,O3FAR1,RBP4	284,284,34912
chr7:150777404-150777679	chr7	+	150777537	150777663	True	NM_031434,NM_031946,NM_001042535,NM_001136044,NM_033015,NM_006712	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,-,-,-	TMUB1,AGAP3,AGAP3,TMUB1,FASTK,FASTK	2800,6162,6162,3007,338,338
chr2:103340265-103340552	chr2	+	103340272	103340584	True	NM_144632,NM_032718	chr2,chr2	+,-	TMEM182,MFSD9	37905,12803
chr6:111196124-111196364	chr6	+	111196184	111196396	True	NM_001634,NM_001033059,NM_015076	chr6,chr6,chr6	+,+,-	AMD1,AMD1,CDK19	-248,-247,-59772
chr1:209959608-209959970	chr1	+	209959674	209960010	True	NM_025228,NM_152485	chr1,chr1	+,-	TRAF3IP3,C1orf74	-30334,-1784
chr12:53716421-53716867	chr12	+	53716421	53716753	True	NM_021640,NM_001173466,NM_015665	chr12,chr12,chr12	+,-,-	C12orf10,AAAS,AAAS	-23008,-1009,-1009
chr6:14725434-14727433	chr6	+	14725636	14726915	True	NM_001031713,NM_004973	chr6,chr6	-,+	CCDC90A,JARID2	-910847,519611
chr11:118841078-118841839	chr11	+	118841203	118841714	True	NR_003040,NM_181721	chr11,chr11	-,+	RPL23AP64,FOXR1	32644,702
chr8:30890143-30890410	chr8	+	30890183	30890335	True	NM_013357,NM_000553,NM_001015508	chr8,chr8,chr8	-,+,-	PURG,WRN,PURG	32,442,946
chr7:90894525-90894849	chr7	+	90894645	90894887	True	NM_006980,NM_003505	chr7,chr7	-,+	MTERF,FZD1	615179,-913
chr1:225614451-225614741	chr1	+	225614680	225614742	True	NM_194442,NM_002296,NM_001130440	chr1,chr1,chr1	-,-,+	LBR,LBR,SRP9	1865,1123,350772
chr12:56236557-56238049	chr12	+	56236804	56237992	True	NR_036479,NM_002429	chr12,chr12	+,-	LOC440104,MMP19	-13463,-69
chr16:88212075-88212699	chr16	+	88212286	88212720	True	NM_001173543,NM_001739	chr16,chr16	+,-	BANP,CA5A	-208719,-242174
chr15:101142313-101142645	chr15	+	101142326	101142624	True	NM_001040616,NM_198243,NM_024708	chr15,chr15,chr15	-,+,+	LINS,ASB7,ASB7	3,130,130
chrX:56784302-56784960	chrX	+	56784341	56784995	True	NR_015367,NR_002308	chrX,chrX	+,-	LOC550643,LOC442454	-28674,-20324
chr17:40573858-40574196	chr17	+	40573955	40574189	True	NM_001130020,NM_012232	chr17,chr17	+,-	ATP6V0A1,PTRF	36672,1199
chr3:139258487-139258692	chr3	+	139258524	139258730	True	NM_001130992,NM_020191,NM_001130993,NM_002899	chr3,chr3,chr3,chr3	-,+,-,-	RBP1,MRPS22,RBP1,RBP1	-9,-195714,-9,-9
chr9:88874975-88876072	chr9	+	88875094	88875706	True	NM_024635,NM_001010907	chr9,chr9	+,-	NAA35,C9orf153	-319089,-575
chr14:39884473-39885164	chr14	+	39884540	39885213	True	NM_203355,NM_203301	chr14,chr14	+,-	CTAGE5,FBXO33	-148277,16550
chr2:152815734-152817599	chr2	+	152815786	152817595	True	NM_001005747,NM_052905	chr2,chr2	-,+	CACNB4,FMNL2	12940,374155
chr3:61545683-61545934	chr3	+	61545705	61545773	True	NM_002841,NM_002012	chr3,chr3	+,-	PTPRG,FHIT	1469,-308572
chr7:77326498-77326799	chr7	+	77326593	77326797	True	NM_032936,NM_198467	chr7,chr7	-,+	TMEM60,RSBN1L	101000,-902
chr9:139972928-139973201	chr9	+	139972932	139973122	True	NM_207309,NM_178448,NM_016219,NR_027447	chr9,chr9,chr9,chr9	+,-,+,-	UAP1L1,C9orf140,MAN1B1,LOC100289341	-1030,-7904,8294,8197
chr13:80055073-80055276	chr13	+	80055141	80055273	True	NM_019080,NM_001161407,NM_022118	chr13,chr13,chr13	+,+,-	NDFIP2,NDFIP2,RBM26	-15,-15,-75218
chr1:46018719-46019385	chr1	+	46019124	46019388	True	NM_001202414,NM_153326,NM_006066,NM_001202431,NM_001202413	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	AKR1A1,AKR1A1,AKR1A1,PRDX1,AKR1A1	-2731,-2731,-2731,-30562,-2731
chr1:119911450-119911897	chr1	+	119911496	119911913	True	NM_001005783,NM_016527,NM_201263	chr1,chr1,chr1	+,+,-	HAO2,HAO2,WARS2	-147,-147,-228201
chr7:152456536-152456744	chr7	+	152456545	152456617	True	NM_005431,NM_020445,NM_001040135	chr7,chr7,chr7	-,+,+	XRCC2,ACTR3B,ACTR3B	-83295,233,233
chr2:74649774-74650433	chr2	+	74650017	74650417	True	NM_001145054,NM_032118	chr2,chr2	-,+	C2orf81,WDR54	-5173,-1183
chr17:44438348-44438760	chr17_ctg5_hap1	+	1513326	1513448	False	NM_016632,NR_033799	chr17_ctg5_hap1,chr17_ctg5_hap1	-,+	ARL17A,NSFP1	486,11464
chr17:44438348-44438760	chr17_ctg5_hap1	-	392018	392398	False	NM_001039083,NM_001113738,NM_001103154,NM_016632,NM_006178	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	+,+,+,+,-	ARL17B,ARL17A,ARL17B,ARL17A,NSF	-457,-486,-457,-486,-11403
chr17:44438348-44438760	chr17	+	44438347	44438727	True	NM_001039083,NM_001113738,NM_001103154,NM_016632,NR_033799	chr17,chr17,chr17,chr17,chr17	-,-,-,-,+	ARL17B,ARL17A,ARL17B,ARL17A,NSFP1	457,486,457,486,11451
chr17:44438348-44438760	chr17	+	44656272	44656652	False	NM_001113738,NM_016632,NM_006178	chr17,chr17,chr17	-,-,+	ARL17A,ARL17A,NSF	486,486,11385
chr14:77848845-77849245	chr14	+	77848890	77848998	True	NM_001010860,NM_213601	chr14,chr14	+,-	SAMD15,TMED8	-5185,-5494
chr1:209958042-209959572	chr1	+	209958145	209959590	True	NM_025228,NM_152485	chr1,chr1	+,-	TRAF3IP3,C1orf74	-28802,-255
chr3:129730688-129732089	chr3	+	129730703	129731995	True	NM_007117,NR_024252	chr3,chr3	+,-	TRH,LOC729375	-37640,98332
chr8:145157469-145158412	chr8	+	145157524	145158260	True	NM_030974,NM_001916,NR_024207,NM_032272	chr8,chr8,chr8,chr8	-,+,+,+	SHARPIN,CYC1,KIAA1875,MAF1	930,-7615,4368,1044
chr19:47103823-47104314	chr19	+	47103836	47104286	True	NM_001205281,NM_005184	chr19,chr19	-,+	LOC100506012,CALM3	221,225
chr11:61520983-61521618	chr11	+	61520987	61521559	True	NR_026882,NM_001127392,NM_013279	chr11,chr11,chr11	-,+,+	DKFZP434K028,C11orf9,C11orf9	3627,-917,1301
chr12:54520516-54520985	chr12	+	54520666	54520901	True	NR_026656,NR_026658	chr12,chr12	+,-	LOC400043,LOC100240735	-862,-45059
chr4:189060954-189061433	chr4	+	189061017	189061273	True	NM_173553,NM_178556	chr4,chr4	-,+	TRIML2,TRIML1	-34609,-470
chr7:66381455-66383180	chr7	+	66381546	66383042	True	NR_003934,NM_017994	chr7,chr7	-,+	LOC729156,C7orf42	-71733,3160
chr6:41907250-41907543	chr6	+	41907376	41907589	True	NM_001760,NM_004053,NM_001136125	chr6,chr6,chr6	-,+,-	CCND3,BYSL,CCND3	2014,-18462,2014
chrX:152084906-152085252	chrX	+	152084994	152085246	True	NM_001178108,NM_001178109,NM_001178106,NM_001178107,NM_001178113,NM_007150,NM_001178110,NM_001103150	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,+,+,-	ZNF185,ZNF185,ZNF185,ZNF185,ZNF185,ZNF185,ZNF185,PNMA5	-2059,-2059,-2059,-2059,1162,-2059,-2059,75565
chr20:38869707-38870300	chr20	+	38869771	38870261	True	NM_003286,NM_005461	chr20,chr20	+,-	TOP1,MAFB	787200,447665
chr16:33140383-33140605	chr16	+	33140455	33140595	True	NR_033866,NM_016212	chr16,chr16	-,+	LOC390705,TP53TG3	158157,64384
chr16:33140383-33140605	chr16	+	32199536	32199612	False	NR_002827,NM_003414	chr16,chr16	-,+	HERC2P4,ZNF267	-35662,-314534
chr16:33140383-33140605	chr16	-	32752456	32752596	False	NM_016212	chr16	-	TP53TG3	-64403
chr10:101180655-101182060	chr10	+	101180694	101181555	True	NM_002079,NM_020348	chr10,chr10	-,+	GOT1,CNNM1	9034,-91889
chr2:25900566-25902008	chr2	+	25900852	25901425	True	NM_183360,NM_183361,NM_033147,NM_016131,NM_021907,NM_033148	chr2,chr2,chr2,chr2,chr2,chr2	-,-,-,+,-,-	DTNB,DTNB,DTNB,RAB10,DTNB,DTNB	-4349,-4349,-4349,355303,-4349,-4349
chr17:55981179-55981401	chr17	+	55981312	55981396	True	NM_080677,NM_017949	chr17,chr17	+,-	DYNLL2,CUEDC1	179383,-562
chr22:30921341-30921610	chr22	+	30921347	30921629	True	NM_174977,NM_000355	chr22,chr22	-,+	SEC14L4,TCN2	-19649,81440
chr22:30921341-30921610	chr22	+	30887802	30887852	False	NR_001580,NM_016498	chr22,chr22	-,+	SDC4P,MTFP1	-10059,-66242
chr17:35711022-35711841	chr17	+	35711084	35711564	True	NM_198836,NM_173625	chr17,chr17	-,+	ACACA,C17orf78	4555,21420
chr19:10382175-10382980	chr19	+	10382229	10383027	True	NM_000201,NM_001103167	chr19,chr19	+,-	ICAM1,ZGLP1	-763,37256
chr21:34101851-34103778	chr21	+	34101994	34103816	True	NM_003895,NM_203446,NM_001160306,NR_024622,NM_001160302	chr21,chr21,chr21,chr21,chr21	-,-,-,+,-	SYNJ1,SYNJ1,SYNJ1,C21orf49,SYNJ1	-1643,-1643,-1744,40594,-1744
chr9:100683999-100684682	chr9	+	100684107	100684627	True	NM_016481,NM_006401	chr9,chr9	-,+	C9orf156,ANP32B	275,60861
chr11:109920989-109921244	chr11	+	109921049	109921203	True	NM_033390,NM_002906	chr11,chr11	+,-	ZC3H12C,RDX	42883,246284
chr3:193310384-193310719	chr3	+	193310427	193310756	True	NM_032279,NM_015560,NM_130832,NM_130833,NM_130831,NM_130836,NM_130837,NM_130834,NM_130835	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,+,+,+,+,+,+,+	ATP13A4,OPA1,OPA1,OPA1,OPA1,OPA1,OPA1,OPA1,OPA1	-37731,176,176,176,176,176,176,176,176
chr1:57046642-57046960	chr1	+	57046826	57046975	True	NM_003713,NM_006252	chr1,chr1	-,+	PPAP2B,PRKAA2	-1569,64014
chr22:37498622-37499340	chr22	+	37498789	37499193	True	NM_024681,NM_153609	chr22,chr22	+,-	KCTD17,TMPRSS6	-51061,550
chr2:133106792-133107615	chr2	+	133106807	133107642	True	NM_001508,NR_027020	chr2,chr2	+,-	GPR39,ANKRD30BL	66504,-91265
chr6:150070357-150070606	chr6	+	150070358	150070574	True	NM_005389,NM_198887	chr6,chr6	+,-	PCMT1,NUP43	256,-2670
chr6:150070357-150070606	chr14	-	90991921	90992137	False	NM_199043,NR_033986	chr14,chr14	-,+	C14orf102,LOC400238	-193642,-70398
chr5:99410972-99412517	chr5	+	99411598	99412107	True	NM_198507,NR_027503	chr5,chr5	+,-	FAM174A,LOC100133050	459016,311914
chr5:99410972-99412517	chr5	-	98834475	98834984	False	NM_001270,NR_036530	chr5,chr5	-,+	CHD1,LOC100289230	-572237,-569701
chr20:1876115-1876469	chr20	+	1876348	1876422	True	NM_080792,NM_001190892,NM_001040023,NM_001040022	chr20,chr20,chr20,chr20	+,-,+,+	SIRPA,PDYN,SIRPA,SIRPA	-974,97080,-573,-1586
chr1:110693856-110694564	chr1	+	110693968	110694595	True	NM_006492,NM_001010898	chr1,chr1	-,+	ALX3,SLC6A17	-80646,-887
chr3:196296536-196297267	chr3	+	196296672	196297057	True	NM_001105573,NM_182627	chr3,chr3	+,-	FBXO45,WDR53	-998,-1259
chr13:21478389-21479011	chr13	+	21478406	21479056	True	NM_022459,NM_138284	chr13,chr13	-,+	XPO4,IL17D	-1493,-200975
chr14:20927856-20928731	chr14	+	20927980	20928762	True	NM_001641,NM_000270,NM_017807,NM_001100814,NM_080649,NM_080648,NM_144568	chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,+,-,-,+,+,-	APEX1,PNP,OSGEP,TMEM55B,APEX1,APEX1,TMEM55B	-4742,8775,-4713,925,-4742,-4742,925
chr1:161400828-161402455	chr1	+	161401385	161402483	True	NM_001136219,NM_001013625	chr1,chr1	+,-	FCGR2A,C1orf192	72721,-63721
chr4:39482039-39483128	chr4	+	39482175	39483149	True	NR_026854,NM_000661	chr4,chr4	+,-	LOC401127,RPL9	-351,-21607
chr1:151803337-151803781	chr1	+	151803461	151803769	True	NR_024237,NM_001001523,NM_001136003,NM_005060	chr1,chr1,chr1,chr1	+,-,-,-	LOC100132111,RORC,C2CD4D,RORC	7175,-4908,9314,629
chr5:173150487-173150831	chr5	+	173150608	173150814	True	NR_027109,NM_138369	chr5,chr5	+,-	LOC285593,BOD1	-144015,-106942
chr22:50746332-50746847	chr22	+	50746595	50746817	True	NM_012401,NM_014678	chr22,chr22	-,+	PLXNB2,PPP6R2	-593,34942
chr1:44175440-44175911	chr1	+	44175590	44175749	True	NM_174963,NM_174964,NM_174965,NM_174966,NM_174967,NM_174968,NM_174969,NM_174971,NM_174970,NR_033827,NM_006279	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,+,+,+,+,-,+	ST3GAL3,ST3GAL3,ST3GAL3,ST3GAL3,ST3GAL3,ST3GAL3,ST3GAL3,ST3GAL3,ST3GAL3,LOC100132774,ST3GAL3	-2425,-2425,-2425,-2425,-2425,-2425,-2425,-2425,-2425,-2578,-2425
chr12:104235184-104235399	chr12	+	104235235	104235349	True	NM_003299,NM_001031701	chr12,chr12	+,-	HSP90B1,NT5DC3	88839,-260
chr8:144790057-144790321	chr8	+	144790091	144790291	True	NM_001162914,NM_139021	chr8,chr8	-,+	LOC100130274,MAPK15	38,8215
chrX:25035291-25035839	chrX	+	25035413	25035878	True	NM_139058,NR_003007	chrX,chrX	-,+	ARX,SCARNA23	-1348,-272906
chr18:43758656-43759884	chr18	+	43759310	43759933	True	NM_001008239,NM_145055,NM_001001937	chr18,chr18,chr18	+,+,-	C18orf25,C18orf25,ATP5A1	-5383,-5383,-75111
chr17:66556563-66558258	chr17	+	66556753	66557933	True	NR_027751,NM_212472	chr17,chr17	-,+	FAM20A,PRKAR1A	-2185,-48261
chr2:39441357-39441793	chr2	+	39441729	39441809	True	NR_037875,NM_001009565	chr2,chr2	+,-	LOC728730,CDKL4	222747,14914
chr20:31591339-31591846	chr20	+	31591477	31591789	True	NM_025227,NM_080675	chr20,chr20	+,-	BPIL1,SUN5	3617,500
chr3:149376320-149376677	chr3	+	149376338	149376606	True	NM_007282,NM_001168280,NM_015472	chr3,chr3,chr3	+,-,-	RNF13,WWTR1,WWTR1	153868,-526,-450
chr6:15660982-15661610	chr6	+	15661009	15661375	True	NM_183040,NR_036448,NM_004973,NM_032122	chr6,chr6,chr6,chr6	-,-,+,-	DTNBP1,DTNBP1,JARID2,DTNBP1	1974,1974,-414534,1974
chr19:2269987-2270302	chr19	+	2270146	2270328	True	NM_004152,NM_198532	chr19,chr19	+,-	OAZ1,C19orf35	-677,11903
chr22:43484676-43485140	chr22	+	43484677	43485187	True	NM_001197,NR_027779,NM_012263	chr22,chr22,chr22	+,-,-	BIK,TTLL1,TTLL1	21569,297,297
chr15:94897276-94899116	chr15	+	94897952	94899170	True	NM_001159644,NR_034095	chr15,chr15	+,-	MCTP2,LOC400456	-7,971217
chr11:117745534-117746612	chr11	+	117745834	117746284	True	NM_001164837,NM_001204268,NM_022003,NM_001164832,NM_001164831,NM_001164836,NR_037907,NM_001558	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,-,-,-,+	FXYD6,FXYD6-FXYD2,FXYD6,FXYD6,FXYD6,FXYD6,FXYD6-FXYD2,IL10RA	1512,1512,1512,1512,1967,1512,1512,110821
chr10:134145938-134146218	chr10	+	134146058	134146190	True	NR_026559,NM_030626,NM_173575,NM_001143757,NM_001143759,NM_001143758	chr10,chr10,chr10,chr10,chr10,chr10	+,+,-,+,+,+	LRRC27,LRRC27,STK32C,LRRC27,LRRC27,LRRC27	4420,-496,-24581,-369,-496,-496
chr11:5265691-5266190	chr11	+	5265829	5266213	True	NM_000559,NR_001589,NM_000519,NM_000184,NM_001004750	chr11,chr11,chr11,chr11,chr11	-,-,-,-,+	HBG1,HBBP1,HBD,HBG2,OR51B6	4924,-1007,-9971,9848,106524
chr7:39984739-39986177	chr7	+	39985012	39986015	True	NM_031267,NM_138701,NM_003718	chr7,chr7,chr7	+,-,+	CDK13,C7orf11,CDK13	3943,188286,3943
chr12:111181514-111182661	chr12	+	111181728	111182660	True	NM_152591,NM_002710	chr12,chr12	+,-	CCDC63,PPP1CC	102150,-971
chr8:11985825-11986269	chr8	+	11985884	11986270	True	NR_003275,NR_027425	chr8,chr8	-,+	LOC392196,FAM66D	584,-12644
chr8:11985825-11986269	chr8	+	7825396	7825483	False	NR_003668,NR_027424	chr8,chr8	-,+	DEFB109P1B,FAM66E	29617,-12912
chr8:11985825-11986269	chr8	-	7199930	7200017	False	NR_027423,NR_003668	chr8,chr8	-,+	FAM66B,DEFB109P1B	12909,-29620
chr1:213121595-213123518	chr1	+	213121749	213123542	True	NM_001136474,NM_001136475,NM_144567,NM_024749	chr1,chr1,chr1,chr1	+,+,-,+	VASH2,VASH2,ANGEL2,VASH2	344,344,65676,344
chr11:76378827-76379313	chr11	+	76379129	76379311	True	NM_015516,NM_001128922,NM_005512	chr11,chr11,chr11	+,-,-	TSKU,LRRC32,LRRC32	114973,2530,1783
chr5:140017825-140018232	chr5	+	140017956	140018030	True	NM_000591,NM_001185012,NR_037428,NM_006083,NM_001174104,NM_001174105,NM_018502,NM_002488,NM_001040021,NR_033697	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,-,+,+,-,-,+,-,-,-	CD14,NDUFA2,MIR3655,IK,CD14,CD14,TMCO6,NDUFA2,CD14,NDUFA2	-4921,9390,9398,9353,-4670,-4670,981,9390,-4670,9390
chr20:1094878-1096466	chr20	+	1094882	1096280	True	NM_018354,NM_006814,NM_178578	chr20,chr20,chr20	-,+,+	C20orf46,PSMF1,PSMF1	68887,2959,-1027
chr1:53387490-53387863	chr1	+	53387541	53387773	True	NM_001198962,NM_002979,NM_001198961,NM_001193617,NM_001193600,NM_018281,NM_001193599,NM_001007098	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,+,-,+,+,-,+,+	ECHDC2,SCP2,ECHDC2,SCP2,SCP2,ECHDC2,SCP2,SCP2	-95,5127,-95,5127,5127,-95,5127,5127
chrX:15334890-15335955	chrX	+	15334911	15335727	True	NM_001201583,NM_080873,NM_001012428,NM_203281	chrX,chrX,chrX,chrX	-,-,-,+	ASB11,ASB11,ASB11,BMX	-1165,-1165,-2230,183172
chr6:165505353-165507078	chr6	+	165505381	165507049	True	NM_144980,NR_027284	chr6,chr6	-,+	C6orf118,LOC441177	216112,893989
chr17:7793669-7793926	chr17	+	7793798	7793948	True	NM_005852,NM_001005273,NR_024349,NM_001005271	chr17,chr17,chr17,chr17	+,+,-,+	CHD3,CHD3,LOC284023,CHD3	-1691,-1691,25367,-5737
chr17:39552451-39553524	chr17	+	39552552	39553430	True	NM_002277,NM_030975	chr17,chr17	-,+	KRT31,KRTAP9-9	464,-140967
chr11:89651941-89652255	chr11	+	89652001	89652076	True	NM_001105522	chr11	-	TRIM49L1	1557
chr11:89651941-89652255	chr11	-	89658731	89658806	False	NM_001105522	chr11	+	TRIM49L1	-1557
chr17:40609716-40610019	chr17	+	40609719	40610024	True	NM_001130021,NM_001130020,NM_005177,NM_012232	chr17,chr17,chr17,chr17	+,+,+,-	ATP6V0A1,ATP6V0A1,ATP6V0A1,PTRF	837,837,837,-34381
chr8:81399017-81399286	chr8	+	81399040	81399138	True	NM_005079,NM_023929,NM_001105539	chr8,chr8,chr8	-,+,+	TPD52,ZBTB10,ZBTB10	-315204,-643,-643
chr7:150924573-150925059	chr7	+	150924596	150925087	True	NM_007189,NM_019015,NM_005692	chr7,chr7,chr7	-,+,-	ABCF2,CHPF2,ABCF2	-279,4497,-279
chr11:112038083-112039568	chr11	+	112038178	112039189	True	NM_001562,NM_031938,NM_001037290,NM_031275	chr11,chr11,chr11,chr11	-,+,+,+	IL18,BCO2,BCO2,TEX12	-3338,7018,7899,-134
chr2:68278371-68279033	chr2	+	68278661	68279069	True	NM_001190263,NM_020143	chr2,chr2	-,+	C1D,PNO1	11140,105935
chr22:18892757-18893204	chr22	+	18892760	18893194	True	NM_001195226,NM_005675	chr22,chr22	-,+	PRODH,DGCR6	30820,541
chr11:72855482-72855777	chr11	+	72855668	72855821	True	NM_014824,NM_002564	chr11,chr11	-,+	FCHSD2,P2RY2	-2525,73522
chr18:22043785-22045106	chr18	+	22043917	22044976	True	NM_021624,NM_001160166,NM_080597,NM_001143828	chr18,chr18,chr18,chr18	+,+,-,+	HRH4,HRH4,OSBPL1A,HRH4	-3375,-3375,-66127,-3375
chr7:73256358-73256594	chr7	+	73256403	73256481	True	NM_001305,NM_152559	chr7,chr7	+,-	CLDN4,WBSCR27	-11261,424
chr7:105512597-105513320	chr7	+	105512728	105513234	True	NM_020725,NM_152750,NM_152749	chr7,chr7,chr7	-,+,-	ATXN7L1,CDHR3,ATXN7L1	3857,90422,3857
chr2:11505899-11507145	chr2	+	11505939	11506569	True	NM_004850,NM_014668	chr2,chr2	-,+	ROCK2,GREB1	-21228,167672
chr2:114360121-114361160	chr2	+	114360240	114361077	True	NR_024077,NR_024004,NR_024005	chr2,chr2,chr2	+,-,-	WASH2P,DDX11L2,DDX11L2	-19061,267,-1087
chr14:69327057-69328936	chr14	+	69327619	69328605	True	NM_207442,NM_001193360	chr14,chr14	-,+	C14orf181,EXD2	-64429,329588
chr1:26560301-26560508	chr1	+	26560409	26560525	True	NM_022778,NM_001077262	chr1,chr1	+,-	CCDC21,UBXN11	167,72720
chr7:26465971-26467723	chr7	+	26466143	26467673	True	NR_022006,NR_015364	chr7,chr7	-,+	KIAA0087,LOC441204	110822,-23088
chr2:29116462-29116709	chr2	+	29116495	29116647	True	NM_017910,NM_015131	chr2,chr2	-,+	TRMT61B,WDR43	-23320,885
chr12:70075783-70077375	chr12	+	70075971	70077117	True	NM_022456,NM_152439	chr12,chr12	+,-	RAB3IP,BEST3	55513,6005
chr4:83822470-83823411	chr4	+	83822539	83823168	True	NM_024672,NR_034075,NR_034076,NR_034077	chr4,chr4,chr4,chr4	+,-,-,-	THAP9,LOC100499177,LOC100499177,LOC100499177	-766,-470,-470,-470
chr10:7710030-7710892	chr10	+	7710052	7710885	True	NM_002216,NM_001001851,NM_030569	chr10,chr10,chr10	+,-,-	ITIH2,ITIH5,ITIH5	34350,-1091,-1091
chrX:51548609-51549361	chrX	+	51548630	51549410	True	NM_001005332,NR_033773	chrX,chrX	+,-	MAGED1,LOC441495	-2536,-123183
chr8:108457117-108458236	chr8	+	108457215	108457889	True	NM_001198535,NM_001146	chr8,chr8	+,-	OXR1,ANGPT1	-718931,52415
chr2:203886240-203886696	chr2	+	203886375	203886503	True	NM_018256,NM_001114132	chr2,chr2	-,+	WDR12,NBEAL1	-109426,-6834
chr8:56014511-56014743	chr8	+	56014545	56014701	True	NM_052898,NR_027765	chr8,chr8	+,-	XKR4,SBF1P1	315,353230
chr7:54723304-54725191	chr7	+	54723690	54725084	True	NM_001012456,NM_182546	chr7,chr7	-,+	SEC61G,VSTM2A	101905,-113735
chr7:32511730-32513202	chr7	+	32511798	32512979	True	NM_015060,NM_012322	chr7,chr7	+,-	AVL9,LSM5	22196,17095
chr16:31271989-31272662	chr16	+	31272108	31272490	True	NM_001145808,NM_000632,NM_152901	chr16,chr16,chr16	+,+,-	ITGAM,ITGAM,PYDC1	-871,-871,-43713
chr1:185015169-185015540	chr1	+	185015468	185015538	True	NM_052966,NM_007212	chr1,chr1	-,+	FAM129A,RNF2	-71786,-968
chr16:16326941-16327239	chr16	+	16326959	16327235	True	NM_001171,NM_001079528,NM_001004067	chr16,chr16,chr16	-,-,+	ABCC6,ABCC6,NOMO3	-9631,-9631,-621
chr16:16326941-16327239	chr16	+	14928144	14928194	False	NR_023387,NM_014287	chr16,chr16	-,+	ABCC6P2,NOMO1	-9585,-552
chr16:16326941-16327239	chr16	-	18572876	18572926	False	NM_001004060,NM_173614,NR_003569	chr16,chr16,chr16	-,-,+	NOMO2,NOMO2,ABCC6P1	558,558,9643
chrX:70984323-70984890	chrX	+	70984475	70984873	True	NR_001568,NM_001145140,NM_001145139	chrX,chrX,chrX	-,+,+	BCYRN1,CXorf49,CXorf49B	-35513,-1386,-1386
chrX:70984323-70984890	chrX	-	70936401	70936799	False	NR_034005,NM_001145140,NM_001145139	chrX,chrX,chrX	+,-,-	FLJ46446,CXorf49,CXorf49B	-19406,1386,1386
chrX:47422632-47423012	chrX	+	47422631	47423035	True	NM_001654,NM_006950	chrX,chrX	+,-	ARAF,SYN1	-2166,56271
chr9:140120365-140120566	chr9	+	140120526	140120590	True	NM_001190228,NM_080877,NM_001177316,NM_001177317,NM_031297,NM_199001	chr9,chr9,chr9,chr9,chr9,chr9	+,+,+,+,-,+	LOC643596,SLC34A3,SLC34A3,SLC34A3,RNF208,C9orf169	1427,4794,4618,4618,-4751,-933
chr5:41184869-41186197	chr5	+	41185268	41186234	True	NM_000587,NM_000065	chr5,chr5	+,-	C7,C6	-275721,27483
chr13:28492423-28492659	chr13	+	28492455	28492703	True	NM_000209,NM_001265	chr13,chr13	+,-	PDX1,CDX2	1464,50664
chr5:140202713-140203043	chr5	+	140202837	140203087	True	NM_031849,NM_002109,NM_018909,NM_018908,NM_031848,NM_031501	chr5,chr5,chr5,chr5,chr5,chr5	+,-,+,+,+,+	PCDHA6,HARS,PCDHA6,PCDHA5,PCDHA6,PCDHA5	4562,-131866,4562,-1527,4562,-1527
chr7:132314902-132315429	chr7	+	132314914	132315263	True	NM_001037126,NM_181775	chr7,chr7	+,-	EXOC4,PLXNA4	622559,18237
chr2:32501682-32502883	chr2	+	32502204	32502899	True	NM_032312,NM_021209	chr2,chr2	+,-	YIPF4,NLRC4	58,-11392
chr2:217499389-217500172	chr2	+	217499495	217500089	True	NM_000597,NM_000599	chr2,chr2	+,-	IGFBP2,IGFBP5	-1424,60236
chr5:72922045-72922279	chr5	+	72922132	72922250	True	NM_001177693,NM_023039,NM_001080479	chr5,chr5,chr5	+,-,+	RGNEF,ANKRA2,RGNEF	-200,-60621,-200
chr1:1360328-1361143	chr1	+	1360405	1361073	True	NM_199121,NM_022834,NR_026871,NM_001146685,NM_001145210	chr1,chr1,chr1,chr1,chr1	+,+,-,+,-	VWA1,VWA1,LOC441869,TMEM88B,LOC441869	9829,9829,-3755,434,-3755
chr6:692398-692640	chr6	+	692480	692682	True	NM_018303,NR_036585	chr6,chr6	-,+	EXOC2,IRF4	477,-300792
chr11:57102938-57103182	chr11	+	57102973	57103055	True	NM_002559,NM_003146	chr11,chr11	+,-	P2RX3,SSRP1	2893,346
chr3:184081328-184081546	chr3	+	184081447	184081571	True	NM_004366,NM_001171088,NM_001171087,NM_006232,NM_001171089	chr3,chr3,chr3,chr3,chr3	-,-,-,+,-	CLCN2,CLCN2,CLCN2,POLR2H,CLCN2	-2056,-2056,-2056,-304,-2056
chr1:87597779-87598047	chr1	+	87597796	87598014	True	NR_026989,NR_026988,NR_026987,NR_026986,NR_026985,NM_203341	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-	LOC339524,LOC339524,LOC339524,LOC339524,LOC339524,SEP15	-2399,-2399,-238,-238,-238,-217689
chr4:120548000-120548219	chr4	+	120548023	120548223	True	NM_033437,NM_033430,NR_037630,NM_001083	chr4,chr4,chr4,chr4	-,-,+,-	PDE5A,PDE5A,LOC645513,PDE5A	1066,269,-172139,1808
chr2:233353819-233354216	chr2	+	233353990	233354178	True	NM_001195129,NM_004826	chr2,chr2	+,-	PRSS56,ECEL1	30994,-1458
chr1:183167570-183169245	chr1	+	183167594	183169066	True	NM_170706,NM_005562	chr1,chr1	-,+	NMNAT2,LAMC2	104993,-12478
chr16:2035688-2035896	chr16	+	2035713	2035917	True	NM_144603,NM_172168,NM_004209,NM_172167,NM_005262	chr16,chr16,chr16,chr16,chr16	-,-,+,-,+	NOXO1,NOXO1,SYNGR3,NOXO1,GFER	-4273,-4529,4028,-4529,-1614
chr2:32263463-32263875	chr2	+	32263581	32263709	True	NM_032574,NM_014946	chr2,chr2	-,+	DPY30,SPAST	1193,24970
chr19:45393611-45393903	chr19	+	45393634	45393938	True	NM_145288,NM_006114,NM_001128916,NM_001128917	chr19,chr19,chr19,chr19	-,+,+,+	ZNF296,TOMM40,TOMM40,TOMM40	185800,538,538,538
chr3:37495101-37495652	chr3	+	37495182	37495536	True	NM_002207,NM_017724	chr3,chr3	+,-	ITGA9,LRRFIP2	-1420,-277331
chrX:74632425-74633422	chrX	+	74632672	74633260	True	NM_001146256,NR_030774	chrX,chrX	-,+	ZDHHC15,UPRT	110127,-138836
chr12:125471811-125473261	chr12	+	125471956	125473279	True	NM_032656,NM_080626	chr12,chr12	-,+	DHX37,BRI3BP	438,4914
chr6:41242829-41243738	chr6	+	41243008	41243754	True	NR_002794,NM_018643	chr6,chr6	+,-	TREML2P1,TREM1	-25946,10753
chr2:179188972-179189378	chr2	+	179188989	179189415	True	NM_001139518,NM_145739	chr2,chr2	-,+	PRKRA,OSBPL6	126002,-4069
chr5:172570151-172570797	chr5	+	172570153	172570773	True	NM_001166175,NM_001205,NM_013980,NM_013979,NM_013978	chr5,chr5,chr5,chr5,chr5	-,+,+,+,+	NKX2-5,BNIP1,BNIP1,BNIP1,BNIP1	91592,671,671,671,671
chr11:19264271-19264751	chr11	+	19264414	19264752	True	NM_001111018,NM_024680	chr11,chr11	+,-	NAV2,E2F8	107518,-1907
chr14:23876909-23877551	chr14	+	23876964	23877378	True	NM_138460,NM_002471,NR_030624	chr14,chr14,chr14	+,-,-	CMTM5,MYH6,MIR208B	-30998,158,9944
chr2:11476731-11477225	chr2	+	11476769	11477061	True	NM_152391,NM_004850	chr2,chr2	+,-	PQLC3,ROCK2	-181287,7710
chr3:56601139-56601811	chr3	+	56601478	56601644	True	NR_024460,NM_015224	chr3,chr3	+,-	CCDC66,C3orf63	-10350,96480
chr9:6412076-6412455	chr9	+	6412282	6412484	True	NM_000170,NM_152896	chr9,chr9	-,+	GLDC,UHRF2	233258,666
chr10:21181399-21183124	chr10	+	21181465	21182977	True	NM_006393,NM_001195627	chr10,chr10	-,+	NEBL,MLLT10	3604,640123
chr12:105516812-105518550	chr12	+	105517120	105518597	True	NR_027752,NM_015275	chr12,chr12	-,+	ALDH1L2,KIAA1033	-38779,-15679
chr16:53737702-53738154	chr16	+	53737727	53738157	True	NM_001080432,NM_015272,NM_001127897	chr16,chr16,chr16	+,-,-	FTO,RPGRIP1L,RPGRIP1L	-47,44,44
chr2:48805048-48806233	chr2	+	48805409	48806119	True	NM_001198594,NM_172311,NM_000233	chr2,chr2,chr2	+,+,-	STON1-GTF2A1L,STON1-GTF2A1L,LHCGR	1606,-9303,176820
chr1:182573651-182574336	chr1	+	182573797	182574375	True	NR_036490,NM_002928	chr1,chr1	+,-	LOC284648,RGS16	9899,-249
chr7:99724549-99725061	chr7	+	99724613	99724907	True	NM_139315,NM_152755,NM_001190415,NR_033792,NM_203397,NM_005641	chr7,chr7,chr7,chr7,chr7,chr7	-,+,-,-,+,-	TAF6,CNPY4,TAF6,TAF6,MBLAC1,TAF6	-7592,-7399,-7132,-7618,-344,-7618
chr3:48227981-48229105	chr3	+	48228077	48228919	True	NM_001789,NM_004345,NM_201567	chr3,chr3,chr3	-,+,-	CDC25A,CAMP,CDC25A	932,35942,932
chr1:247370615-247371555	chr1	+	247370625	247371594	True	NM_173858,NR_037480	chr1,chr1	+,-	VN1R5,MIR3916	47779,-5263
chr17:46703713-46703993	chr17	+	46703830	46703960	True	NM_024017,NR_033205,NR_029582	chr17,chr17,chr17	-,+,-	HOXB9,LOC404266,MIR196A1	-3,-30568,6011
chr10:21788865-21789239	chr10	+	21788882	21789180	True	NM_001010911,NM_001195627,NR_031736	chr10,chr10,chr10	-,+,-	C10orf114,MLLT10,MIR1915	-2669,33920,-3312
chr18:12708404-12708795	chr18	+	12708636	12708704	True	NM_020232,NM_024899	chr18,chr18	+,-	PSMG2,CEP76	-5700,-5933
chr22:38597639-38597856	chr22	+	38597659	38597837	True	NM_001161573,NM_001161572,NM_001161574,NM_012323,NM_001199562	chr22,chr22,chr22,chr22,chr22	+,+,+,+,-	MAFF,MAFF,MAFF,MAFF,PLA2G6	1189,101,101,101,-19823
chr22:50913854-50914450	chr22	+	50913979	50914221	True	NM_024866,NM_002972	chr22,chr22	+,-	ADM2,SBF1	5790,-515
chr15:51979267-51979810	chr15	+	51979427	51979856	True	NM_013243,NM_153374,NM_001165257	chr15,chr15,chr15	+,-,+	SCG3,LYSMD2,SCG3	-5938,50519,-5938
chr17:27056176-27056415	chr17	+	27056185	27056377	True	NM_000984,NR_000014,NM_178170,NR_000010,NR_000013,NM_138463,NM_001160407,NR_000009	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,-,-,+	RPL23A,SNORD42A,NEK8,SNORD4A,SNORD42B,TLCD1,TLCD1,SNORD4B	-9240,-5793,-408,-6640,-8672,-2955,-2236,-5541
chr7:6052983-6053979	chr7	+	6053193	6053874	True	NM_006303,NR_003085,NM_000535	chr7,chr7,chr7	+,-,-	AIMP2,PMS2,PMS2	-4364,-4456,-4456
chr16:68675704-68676213	chr16	+	68676200	68676262	True	NM_018667,NM_001793	chr16,chr16	-,+	SMPD3,CDH3	-193791,1888
chr10:3829286-3830145	chr10	+	3829317	3830139	True	NM_001160125,NM_001160124,NM_002627,NR_027653,NM_001300	chr10,chr10,chr10,chr10,chr10	-,-,+,-,-	KLF6,KLF6,PFKP,KLF6,KLF6	-1844,-1844,-719630,-1844,-1844
chr1:161196464-161197083	chr1	+	161196518	161197069	True	NM_001643,NM_032174	chr1,chr1	-,+	APOA2,TOMM40L	-3100,-736
chr1:26606959-26608653	chr1	+	26607276	26608393	True	NM_031286,NM_001077262	chr1,chr1	+,-	SH3BGRL3,UBXN11	-1114,24852
chr10:115317444-115317966	chr10	+	115317524	115317996	True	NM_006175,NM_004132,NM_001177660	chr10,chr10,chr10	-,+,+	NRAP,HABP2,HABP2	105859,-4810,-6998
chrX:71793023-71794413	chrX	+	71793142	71794092	True	NM_018486,NM_001080851,NM_001166448,NM_001166419,NM_001166418,NM_001166422,NM_001166420	chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,+,-,-,-,-,-	HDAC8,DMRTC1B,HDAC8,HDAC8,HDAC8,HDAC8,HDAC8	-189,270783,-189,-189,-189,-189,-189
chr17:20514787-20515349	chr17	+	20514915	20515383	True	NM_001190790,NR_029393	chr17,chr17	+,-	CDRT15L2,KRT16P3	-31929,-107104
chr11:131129130-131130103	chr11	+	131129403	131129779	True	NM_001048209,NM_014758	chr11,chr11	+,-	NTM,SNX19	110591,-343021
chr5:172082638-172083708	chr5	+	172082658	172083566	True	NM_001142651,NM_004417	chr5,chr5	+,-	NEURL1B,DUSP1	-14433,114688
chr3:50363513-50365079	chr3	+	50363818	50365094	True	NM_007275,NM_170713,NM_007022,NM_033158,NM_003773	chr3,chr3,chr3,chr3,chr3	-,-,+,-,-	TUSC2,RASSF1,CYB561D2,HYAL2,HYAL2	624,9851,23202,-3537,-3537
chr14:24838167-24838976	chr14	+	24838444	24839014	True	NM_001198966,NM_001198967,NM_001198965,NM_006871,NM_004554,NM_001136022	chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,-,+,+	NFATC4,NFATC4,NFATC4,RIPK3,NFATC4,NFATC4	-193,-2350,-1269,-29202,-1269,-2350
chr11:13299915-13300128	chr11	+	13299953	13300127	True	NM_001030273,NM_001030272,NM_001178,NM_032320	chr11,chr11,chr11,chr11	+,+,+,-	ARNTL,ARNTL,ARNTL,BTBD10	-679,-679,-679,184761
chr6:138502768-138504763	chr6	+	138503044	138504631	True	NM_021635,NM_020340	chr6,chr6	-,+	PBOV1,KIAA1244	35047,-20043
chr8:22847001-22847542	chr8	+	22847058	22847579	True	NM_015178,NM_001160037,NM_001160036,NM_144962	chr8,chr8,chr8,chr8	+,+,+,-	RHOBTB2,RHOBTB2,RHOBTB2,PEBP4	9512,5781,-2186,-61637
chr21:15356837-15357661	chr18	-	14174049	14174127	True	NR_026756,NM_145287	chr18,chr18	+,-	LOC284233,ZNF519	163294,-41560
chr21:15356837-15357661	chr21	+	15356860	15357702	False	NR_027270,NM_144770	chr21,chr21	-,+	C21orf81,RBM11	-4095,230763
chr7:64022532-64023112	chr7	+	64022678	64022908	True	NM_178558,NM_001130022,NR_033245	chr7,chr7,chr7	-,-,+	ZNF680,ZNF680,LOC641746	655,655,20079
chr20:13616328-13616950	chr20	+	13616337	13616764	True	NM_001039375,NM_017714	chr20,chr20	+,-	C20orf7,TASP1	148907,2880
chr22:23890498-23891439	chr22	+	23890661	23891311	True	NM_153615,NM_020070	chr22,chr22	+,-	RGL4,IGLL1	141736,31234
chr6:130762769-130763960	chr6	+	130762809	130763946	True	NM_052913,NM_001017373	chr6,chr6	+,-	TMEM200A,SAMD3	-4598,-218710
chr18:11853912-11855232	chr18	+	11854166	11854925	True	NM_023075,NM_020412	chr18,chr18	-,+	MPPE1,CHMP1B	53771,-2832
chr16:15950403-15950867	chr16	+	15950413	15950914	True	NM_002474,NM_001040113,NM_004996,NM_001040114,NM_022844	chr16,chr16,chr16,chr16,chr16	-,-,+,-,-	MYH11,MYH11,ABCC1,MYH11,MYH11	23,23,92519,23,23
chr17:72431397-72432886	chr17	+	72431596	72432850	True	NM_022036,NM_018653,NM_001080466	chr17,chr17,chr17	+,+,-	GPRC5C,GPRC5C,BTBD17	-3981,-1812,-73638
chr12:122905060-122905337	chr12	+	122905076	122905199	True	NM_002956,NM_198240,NM_014708	chr12,chr12,chr12	-,-,+	CLIP1,CLIP1,KNTC1	1968,1968,106609
chrX:91221715-91222285	chrX	+	91222187	91222259	True	NM_001168363,NM_004538	chrX,chrX	+,-	PCDH11X,NAP1L3	-131779,1706473
chr6:152130361-152130595	chr6	+	152130368	152130580	True	NM_017909,NM_000125,NM_001122741,NM_001122740	chr6,chr6,chr6,chr6	-,+,+,+	RMND1,ESR1,ESR1,ESR1	-357052,-1605,-3611,-1965
chr2:26569363-26569573	chr2	+	26569382	26569570	True	NM_033505,NM_153835	chr2,chr2	+,-	EPT1,GPR113	-479,165
chrX:11771697-11773309	chrX	+	11771746	11773298	True	NM_078628,NM_078629,NM_001193270,NM_006125,NM_006800	chrX,chrX,chrX,chrX,chrX	+,+,+,-,+	MSL3,MSL3,MSL3,ARHGAP6,MSL3	2979,2979,3410,-87925,4436
chr13:51791677-51792100	chr13	+	51791768	51791881	True	NR_003923,NM_145019	chr13,chr13	-,+	GUCY1B2,FAM124A	-151475,4625
chr20:62337324-62338500	chr20	+	62337401	62338452	True	NM_032527,NM_003823,NM_003224,NM_001195653,NM_001195654,NM_181485,NM_001083113,NM_001134758	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,+,-,+,+,+,+,-	ZGPAT,TNFRSF6B,ARFRP1,ZGPAT,ZGPAT,ZGPAT,ZGPAT,ARFRP1	927,-9448,953,927,927,927,341,953
chr1:168146274-168148065	chr1	+	168147085	168148110	True	NM_153832,NM_001031800,NM_152902	chr1,chr1,chr1	-,+,+	GPR161,TIPRL,TIPRL	-41461,60,60
chr14:99957069-99958828	chr14	+	99957300	99958849	True	NM_199123,NM_001099402	chr14,chr14	-,+	SETD3,CCNK	-10074,-9621
chr1:44173601-44174785	chr1	+	44173726	44174719	True	NM_174963,NM_174964,NM_174965,NM_174966,NM_174967,NM_174968,NM_174969,NM_174971,NM_174970,NR_033827,NM_006279	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,+,+,+,+,-,+	ST3GAL3,ST3GAL3,ST3GAL3,ST3GAL3,ST3GAL3,ST3GAL3,ST3GAL3,ST3GAL3,ST3GAL3,LOC100132774,ST3GAL3	-559,-559,-559,-559,-559,-559,-559,-559,-559,-714,-559
chr15:77094603-77094958	chr15	+	77094677	77094983	True	NM_002902,NM_001145923	chr15,chr15	+,-	RCN2,SCAPER	128978,59352
chr9:69723540-69724435	chr22	-	22652342	22652523	False	NM_080764,NR_027293	chr22,chr22	-,+	ZNF280B,LOC96610	211042,18
chr9:69723540-69724435	chr9	+	69724088	69724182	True	NM_001126334,NR_024443	chr9,chr9	-,+	FOXD4L5,LOC100133920	454683,-72778
chr9:69723540-69724435	chr9	+	70340302	70340516	False	NM_201453,NM_001099279	chr9,chr9	+,-	CBWD3,FOXD4L2	516322,89429
chr9:69723540-69724435	chr9	-	66958202	66958252	False	NR_024443,NR_024496	chr9,chr9	-,+	LOC100133920,LOC442421	72780,-463984
chr9:69723540-69724435	chr9	+	67340120	67340258	False	NM_032250,NR_002817	chr9,chr9	+,-	ANKRD20A1,AQP7P1	586502,-50628
chr3:51429726-51430383	chr3	+	51429835	51430221	True	NM_001171904,NM_006010,NM_013286	chr3,chr3,chr3	-,+,+	VPRBP,MANF,RBM15B	103847,-7194,-1187
chr7:104655114-104655640	chr7	+	104655157	104655680	True	NM_182931,NR_024586,NM_018682	chr7,chr7,chr7	+,-,+	MLL5,LOC100216545,MLL5	-571,-569,-571
chr17:34899632-34900077	chr17	+	34899789	34900123	True	NM_001163735,NM_024835,NM_178517,NM_001033580,NM_025109	chr17,chr17,chr17,chr17,chr17	-,+,+,-,-	MYO19,GGNBP2,PIGW,MYO19,MYO19	-8484,613,-8444,-8484,-8484
chr2:68384723-68384926	chr2	+	68384743	68384826	True	NM_138458,NM_020143	chr2,chr2	-,+	WDR92,PNO1	-87,178
chr21:36260495-36260888	chr21	+	36260499	36260867	True	NR_024351,NM_001001890,NM_001122607	chr21,chr21,chr21	+,-,-	NCRNA00160,RUNX1,RUNX1	-164445,170,170
chr12:133002806-133003042	chr12	+	133002837	133003039	True	NM_001142641,NM_001122636	chr12,chr12	+,-	FBRSL1,GALNT9	64117,-96932
chr15:59726213-59727207	chr15	+	59726405	59727129	True	NM_152450,NM_004998	chr15,chr15	+,-	FAM81A,MYO1E	3242,-61334
chr15:76135206-76135438	chr15	+	76135262	76135464	True	NM_001145335,NM_173469,NR_036198	chr15,chr15,chr15	+,+,-	UBE2Q2,UBE2Q2,MIR4313	920,157,-80606
chr22:21984773-21985432	chr22	+	21984888	21985460	True	NM_152612,NM_001017964	chr22,chr22	+,-	CCDC116,YDJC	1625,-548
chr16:24293472-24294348	chr16	+	24293504	24293962	True	NM_006539,NM_033266	chr16,chr16	+,-	CACNG3,ERN2	-26689,-568683
chr3:46917448-46918354	chr3	+	46917545	46918319	True	NM_000316,NM_001184744,NM_000258	chr3,chr3,chr3	+,+,-	PTH1R,PTH1R,MYL3	916,5419,-12572
chr3:192959359-192959774	chr3	+	192959395	192959799	True	NM_020386,NR_026877,NM_198505	chr3,chr3,chr3	+,+,-	HRASLS,MGC2889,ATP13A5	-528,-14,136765
chr3:183418481-183418960	chr3	+	183418616	183418833	True	NM_024871,NM_018023	chr3,chr3	-,+	MAP6D1,YEATS2	124623,-3067
chr3:139108205-139108410	chr3	+	139108367	139108455	True	NM_004766,NR_023350,NM_020191	chr3,chr3,chr3	-,-,+	COPB2,COPB2,MRPS22	117,117,-45557
chr3:51535485-51536132	chr3	+	51535500	51536114	True	NM_001171904,NM_014703,NM_015106	chr3,chr3,chr3	-,-,+	VPRBP,VPRBP,RAD54L2	-1482,-1482,39481
chr3:57530080-57530649	chr3	+	57530334	57530676	True	NM_198564,NM_178504,NM_177966	chr3,chr3,chr3	-,-,+	DNAH12,DNAH12,PDE12	-263,-263,11304
chr11:93769061-93769860	chr11	+	93769252	93769739	True	NM_001098672,NM_001144871	chr11,chr11	+,-	HEPHL1,C11orf90	-14925,-185584
chr11:78281352-78283081	chr11	+	78281533	78282808	True	NR_027479,NM_024678,NM_020798	chr11,chr11,chr11	-,-,+	NARS2,NARS2,USP35	3153,3153,-381726
chr12:123321013-123321531	chr12	+	123321235	123321445	True	NM_003959,NM_024667	chr12,chr12	+,-	HIP1R,VPS37B	-1247,59317
chr12:47471785-47472730	chr12	+	47471895	47472527	True	NM_181847,NM_138371,NM_001143668	chr12,chr12,chr12	-,+,-	AMIGO2,FAM113B,AMIGO2	1265,137524,1265
chr16:79800441-79802084	chr16	+	79800457	79801836	True	NM_005360,NM_130897	chr16,chr16	-,+	MAF,DYNLRB2	-165835,773017
chr8:57499990-57500331	chr8	+	57500034	57500326	True	NM_001135690,NM_024300	chr8,chr8	-,+	PENK,CHCHD7	-140752,-375771
chr8:77593649-77594175	chr8	+	77593677	77594225	True	NM_024721,NR_024360	chr8,chr8	+,-	ZFHX4,LOC100192378	-216,1337
chr6:27703301-27704478	chr6	+	27703436	27704469	True	NM_003509,NM_003519	chr6,chr6	+,-	HIST1H2AI,HIST1H2BL	71507,71290
chr16:66868679-66869245	chr16	+	66868786	66868998	True	NM_003905,NM_005182,NM_001018159,NM_001014435,NM_001018160	chr16,chr16,chr16,chr16,chr16	-,+,-,+,-	NAE1,CA7,NAE1,CA7,NAE1	-3907,9283,-3907,9842,-3907
chr8:144697896-144698302	chr8	+	144698001	144698315	True	NM_003313,NM_032862,NM_023078	chr8,chr8,chr8	-,+,-	TSTA3,TIGD5,PYCRL	1467,-17978,-6217
chr7:57510884-57512060	chr7	+	57511050	57511847	True	NR_030766,NM_001159279	chr7,chr7	-,+	LOC642006,ZNF716	-263187,-1227
chr7:73083136-73083399	chr7	+	73083289	73083375	True	NM_001077621,NM_032317	chr7,chr7	+,-	VPS37D,DNAJC30	-1166,14456
chr1:4041984-4042580	chr1	+	4042397	4042555	True	NR_024455,NM_207356	chr1,chr1	+,-	LOC100133612,C1orf174	-225480,-225540
chr6:160184039-160184762	chr6	+	160184051	160184649	True	NR_037166,NM_005891	chr6,chr6	-,+	LOC100129518,ACAT2	-687,-1113
chr21:44395785-44397748	chr21	+	44396038	44397439	True	NM_004571,NM_018669	chr21,chr21	+,-	PKNOX1,WDR4	-1453,-96360
chr22:35794410-35794949	chr22	+	35794820	35794962	True	NM_005368,NM_006739	chr22,chr22	-,+	MB,MCM5	218472,1153
chr16:30085253-30085875	chr16	+	30085252	30085393	True	NM_002720,NM_004608,NM_184043,NM_184041,NM_001127617	chr16,chr16,chr16,chr16,chr16	+,-,+,+,+	PPP4C,TBX6,ALDOA,ALDOA,ALDOA	1990,17865,-9711,-8267,-9338
chr6:52285790-52286090	chr6	+	52285818	52286080	True	NM_018100,NM_001172420,NM_002388,NR_033327	chr6,chr6,chr6,chr6	+,+,-,+	EFHC1,EFHC1,MCM3,EFHC1	-875,-64,-136236,-875
chr10:11625483-11625910	chr10	+	11625518	11625721	True	NM_014688,NM_024693	chr10,chr10	-,+	USP6NL,ECHDC3	28017,158634
chr19:11200334-11200629	chr19	+	11200339	11200519	True	NM_001195802,NM_001195803,NM_001195800,NM_000527,NM_001195798,NM_001195799,NM_182513	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,+,-	LDLR,LDLR,LDLR,LDLR,LDLR,LDLR,SPC24	-353,-353,-353,-353,-353,-353,66015
chr10:120925590-120925931	chr10	+	120925641	120925926	True	NM_005308,NM_213649	chr10,chr10	+,-	GRK5,SFXN4	41270,-437
chr3:73670654-73670923	chr3	+	73670692	73670962	True	NM_018029,NM_015009	chr3,chr3	+,-	EBLN2,PDZRN3	-559933,3160
chr12:69989390-69991353	chr12	+	69989577	69991368	True	NR_037475,NM_001198842	chr12,chr12	-,+	MIR3913-1,CCT2	-10974,-10166
chr11:67768384-67769468	chr11	+	67768697	67769314	True	NM_030930,NM_001030010,NM_000694,NM_001161473	chr11,chr11,chr11,chr11	-,+,+,+	UNC93B1,ALDH3B1,ALDH3B1,ALDH3B1	2330,8475,8475,6733
chr1:27560048-27560355	chr1	+	27560098	27560330	True	NM_015023,NM_003047	chr1,chr1	+,-	WDTC1,SLC9A1	676,-78647
chr11:46260076-46260294	chr11	+	46260075	46260271	True	NM_016621,NM_052854	chr11,chr11	-,+	PHF21A,CREB3L1	-117090,38956
chr8:114354041-114356020	chr8	+	114354040	114355900	True	NR_031745,NM_198124	chr8,chr8	+,-	MIR2053,CSMD3	-698371,33543
chr5:170811657-170812243	chr5	+	170811657	170812024	True	NM_002520,NM_199185,NR_037474,NM_001037738	chr5,chr5,chr5,chr5	+,+,-,+	NPM1,NPM1,MIR3912,NPM1	2683,2683,1799,2683
chr5:89901154-89901663	chr5	+	89901324	89901705	True	NM_198273,NR_003149	chr5,chr5	-,+	LYSMD3,GPR98	-75923,-46771
chr3:184059096-184059549	chr3	+	184059141	184059567	True	NM_144635,NM_001171087,NM_001171093	chr3,chr3,chr3	+,-,+	FAM131A,CLCN2,FAM131A	-3916,19874,-5475
chr14:63498984-63499437	chr14	+	63499006	63499453	True	NM_139318,NM_020663	chr14,chr14	-,+	KCNH5,RHOJ	12553,171691
chr16:72207754-72209517	chr16	+	72208076	72209363	True	NM_001160213,NM_031293,NM_014003	chr16,chr16,chr16	-,-,+	PMFBP1,PMFBP1,DHX38	-1727,-2012,-80512
chr7:117065967-117066398	chr7	+	117066065	117066265	True	NR_023315,NM_000492,NM_130768	chr7,chr7,chr7	-,+,-	ASZ1,CFTR,ASZ1	1366,53751,1366
chr16:31438658-31439076	chr16	+	31438685	31438929	True	NM_001105247,NM_005205	chr16,chr16	+,-	ARMC5,COX6A2	31387,870
chr22:39747575-39749160	chr22	+	39747687	39748611	True	NM_001033853,NM_145731,NM_004711	chr22,chr22,chr22	-,+,+	RPL3,SYNGR1,SYNGR1	-32017,-1784,-1784
chr19:10529122-10529626	chr19	+	10529188	10529474	True	NM_007065,NM_001111307	chr19,chr19	-,+	CDC37,PDE4A	-14917,1858
chr2:136875250-136875736	chr2	+	136875285	136875753	True	NM_001008540,NM_003467,NM_014607	chr2,chr2,chr2	-,-,+	CXCR4,CXCR4,UBXN4	-1472,22,-376147
chr3:52568726-52569095	chr3	+	52568808	52569068	True	NM_001124767,NM_001134231,NM_022908	chr3,chr3,chr3	+,-,-	C3orf78,NT5DC2,NT5DC2	1552,-1015,75
chr14:71863754-71864778	chr14	+	71863753	71864618	True	NR_001276,NM_033141	chr14,chr14	+,-	SNORD56B,MAP3K9	435,-587865
chr3:101442882-101443442	chr3	+	101442919	101443425	True	NM_000986,NM_024548	chr3,chr3	-,+	RPL24,CEP97	-37356,68
chr19:47217887-47218985	chr19	+	47217900	47218848	True	NM_001079882,NM_001039885,NM_001079880,NM_001079881,NM_016457,NR_036157	chr19,chr19,chr19,chr19,chr19,chr19	-,+,-,-,-,-	PRKD2,FKRP,PRKD2,PRKD2,PRKD2,MIR320E	-323,30454,1586,1586,1586,-5298
chr4:104641122-104642000	chr4	+	104641127	104642013	True	NM_001008388,NM_001059	chr4,chr4	+,-	CISD2,TACR3	-851043,-154
chr16:31227942-31228297	chr16	+	31228122	31228322	True	NM_001008274,NM_152901	chr16,chr16	+,-	TRIM72,PYDC1	-2831,123
chr19:10512755-10513272	chr19	+	10512904	10513313	True	NM_007065,NM_001111307,NR_031592	chr19,chr19,chr19	-,+,-	CDC37,PDE4A,MIR1181	1008,18019,951
chr8:58191437-58191696	chr8	+	58191566	58191706	True	NR_026772,NM_017813	chr8,chr8	+,-	C8orf71,IMPAD1	395,-285139
chr6:31802437-31802651	chr6_qbl_hap6	+	3096147	3096301	False	NM_001040437,NR_002745,NM_005527,NR_002742,NM_005346,NM_001040438	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,SNORD52,HSPA1B,C6orf48	50,397,-19665,2207,-7041,50
chr6:31802437-31802651	chr6	+	31802488	31802642	True	NM_001040437,NR_002745,NM_005527,NR_002742,NM_005346,NM_001040438	chr6,chr6,chr6,chr6,chr6,chr6	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,SNORD52,HSPA1B,C6orf48	50,397,-19653,2210,-7033,50
chr6:31802437-31802651	chr6_apd_hap1	+	3117242	3117396	False	NM_001040437,NR_002745,NM_005527,NR_002742,NM_005346,NM_001040438	chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,SNORD52,HSPA1B,C6orf48	50,397,-19646,2211,-7023,50
chr6:31802437-31802651	chr6_dbb_hap3	+	3088179	3088229	False	NM_001040437,NR_002745,NM_005527,NR_002742,NM_005346,NM_001040438	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,SNORD52,HSPA1B,C6orf48	50,397,-19757,2209,-7131,50
chr5:55765941-55767093	chr5	+	55765999	55766841	True	NM_024669,NM_005921	chr5,chr5	-,+	ANKRD55,MAP3K1	-236813,344058
chr2:97428706-97430091	chr2	+	97428797	97430056	True	NR_024521,NM_020184	chr2,chr2	-,+	LMAN2L,CNNM4	-22984,-2209
chr11:71711341-71712450	chr11	+	71711771	71712263	True	NM_001145055,NM_001145057,NM_001039660,NM_001039659,NM_005699,NM_173042,NR_036123,NM_173044	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,+,-,+	IL18BP,IL18BP,IL18BP,IL18BP,IL18BP,IL18BP,MIR3165,IL18BP	-849,-1159,-1864,-1864,-1713,-1713,71135,-1864
chr11:31389874-31391182	chr11	+	31389925	31391107	True	NM_181706,NM_181807	chr11,chr11	+,-	DNAJC24,DCDC1	269,300
chr6:130508329-130509087	chr6	+	130508328	130509046	True	NM_032438,NM_152552	chr6,chr6	+,-	L3MBTL3,SAMD3	-168651,27498
chr12:57413998-57414598	chr12	+	57414093	57414321	True	NR_033654,NM_007264,NM_013251,NM_001178054	chr12,chr12,chr12,chr12	-,+,-,-	TAC3,GPR182,TAC3,TAC3	-3749,-25799,-3749,-3749
chr11:33258222-33258706	chr11	+	33258535	33258603	True	NM_001033506,NM_001048200	chr11,chr11	-,+	CSTF3,HIPK3	-75498,20564
chr5:145826647-145826957	chr5	+	145826690	145826916	True	NM_006706,NM_001040006,NM_194251	chr5,chr5,chr5	+,+,-	TCERG1,TCERG1,GPR151	-26,-26,68810
chr12:111278624-111279968	chr12	+	111278923	111279751	True	NM_152591,NM_000432	chr12,chr12	+,-	CCDC63,MYL2	5059,78703
chr19:45876413-45876705	chr19	+	45876437	45876501	True	NM_001130867,NM_177417,NM_000400	chr19,chr19,chr19	-,+,-	ERCC2,KLC3,ERCC2	-2592,-32490,-2592
chr12:8324423-8325214	chr12	+	8324609	8325227	True	NM_001004328,NR_026788,NR_036440	chr12,chr12,chr12	+,+,-	ZNF705A,FAM66C,POU5F1P3	-56,7577,-37161
chr6:74068901-74069781	chr6	+	74069290	74069396	True	NM_001025290,NM_001017361	chr6,chr6	-,+	DPPA5,C6orf221	-5291,3003
chr6:32710504-32710935	chr6	+	32710514	32710605	True	NM_020056,NM_001198858	chr6,chr6	+,-	HLA-DQA2,HLA-DQB2	-1402,20775
chr6:32710504-32710935	chr6_ssto_hap7	+	4142182	4142273	False	NM_020056,NM_001198858	chr6_ssto_hap7,chr6_ssto_hap7	+,-	HLA-DQA2,HLA-DQB2	-1402,20773
chr6:32710504-32710935	chr6_apd_hap1	+	3998791	3998882	False	NM_020056,NM_001198858	chr6_apd_hap1,chr6_apd_hap1	+,-	HLA-DQA2,HLA-DQB2	-1402,20777
chr6:32710504-32710935	chr6_cox_hap2	+	4156415	4156506	False	NM_020056,NM_001198858	chr6_cox_hap2,chr6_cox_hap2	+,-	HLA-DQA2,HLA-DQB2	-1402,20777
chr5:135073461-135074343	chr5	+	135073613	135074289	True	NM_145282,NR_027127	chr5,chr5	+,-	SLC25A48,LOC340074	96075,-83989
chr2:182545769-182546064	chr2	+	182545808	182546050	True	NM_002500,NM_001130445	chr2,chr2	-,+	NEUROD1,SSFA2	-416,210421
chr20:19732325-19732568	chr20	+	19732385	19732617	True	NM_016652,NM_018993	chr20,chr20	-,+	CRNKL1,RIN2	304123,137592
chr11:63996058-63997398	chr11	+	63996460	63997364	True	NM_031472,NM_001160389,NM_001033678,NM_032344,NM_005528,NM_003377,NM_001160392,NM_001160393,NM_001160390,NM_001128613,NM_001128612	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,+,+,+,-,-,-,+,+	TRPT1,TRPT1,TRPT1,NUDT22,DNAJC4,VEGFB,TRPT1,TRPT1,TRPT1,NUDT22,NUDT22	-2734,-2734,-2734,-2773,388,4901,-2734,-3119,-2734,-2773,-2773
chrX:64886479-64887310	chrX	+	64886621	64887145	True	NM_002444,NR_033742	chrX,chrX	+,-	MSN,FKSG43	365,-114320
chr17:7462714-7462981	chr17	+	7462734	7463024	True	NM_172087,NM_003808,NR_037926,NM_172088,NM_006942,NM_001198624,NM_015670,NM_001198623,NM_001198622	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,-,+,+,+,+	TNFSF13,TNFSF13,SENP3-EIF4A1,TNFSF13,SOX15,TNFSF13,SENP3,TNFSF13,TNFSF13	-1181,-1181,2284,-1181,30514,-1181,2284,-1181,-1181
chr2:264693-265085	chr2	+	264771	265101	True	NM_007099,NM_001040649,NM_004300,NR_024080,NM_001159597,NM_015677	chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,-,-	ACP1,ACP1,ACP1,ACP1,SH3YL1,SH3YL1	47,47,47,47,-703,-703
chr5:94408595-94409674	chr5	+	94408782	94409462	True	NM_152548,NM_001002796	chr5,chr5	+,-	FAM81B,MCTP1	317585,8133
chr4:100815679-100816257	chr4	+	100815798	100816178	True	NM_021970,NR_024170,NR_002799	chr4,chr4,chr4	-,-,+	LAMTOR3,LAMTOR3,LOC256880	-95,-95,55457
chr1:32754800-32755248	chr1	+	32754982	32755140	True	NM_023009,NM_004964	chr1,chr1	-,+	MARCKSL1,HDAC1	46744,2567
chr12:53490808-53491087	chr12	+	53490856	53491058	True	NM_002178,NM_003578,NM_032840	chr12,chr12,chr12	+,+,-	IGFBP6,SOAT2,SPRYD3	377,6215,-17652
chr18:29673816-29674052	chr18	+	29673820	29673894	True	NM_014939,NM_001191324,NM_016271,NM_198128	chr18,chr18,chr18,chr18	-,+,+,+	TRAPPC8,RNF138,RNF138,RNF138	-150729,-1304,-2055,-1304
chr12:50900391-50901473	chr12	+	50900488	50901263	True	NM_173602,NM_001145475	chr12,chr12	+,-	DIP2B,FAM186A	-1771,-110083
chr18:56975905-56976775	chr18	+	56975965	56976678	True	NM_181654,NM_002091	chr18,chr18	-,+	CPLX4,GRP	9254,-88616
chr4:80246439-80246683	chr4	+	80246515	80246731	True	NM_032693,NR_026555	chr4,chr4	-,+	NAA11,GDEP	490,501893
chr11:113641394-113641788	chr11	+	113641598	113641674	True	NM_001101389,NM_004724	chr11,chr11	+,-	CLDN25,ZW10	8843,2801
chr4:8582716-8582935	chr4	+	8582747	8582955	True	NM_003501,NM_080819	chr4,chr4	-,+	ACOX3,GPR78	-140295,-507
chr7:65007406-65008195	chr7	+	65007750	65007966	True	NM_000181,NR_027392	chr7,chr7	-,+	GUSB,INTS4L2	439385,104810
chr7:65007406-65008195	chr7	-	64613417	64613531	False	NR_027393,NM_001007253	chr7,chr7	+,-	INTS4L1,ERV3	-11877,-146293
chr7:65007406-65008195	chr7	-	65124514	65124730	False	NM_000181,NR_027392	chr7,chr7	-,+	GUSB,INTS4L2	322627,-11788
chr14:75983593-75984195	chr14	+	75983609	75984064	True	NM_006399,NM_007176	chr14,chr14	+,-	BATF,C14orf1	4719,143533
chr6:41863212-41863471	chr6	+	41863246	41863421	True	NM_018561,NM_004053	chr6,chr6	-,+	USP49,BYSL	-147,25543
chr1:23343880-23345816	chr1	+	23344543	23345657	True	NM_001142546,NM_015013,NM_001009999	chr1,chr1,chr1	-,+,+	LUZP1,KDM1A,KDM1A	149750,283,283
chr11:62359619-62360875	chr11	+	62359647	62360899	True	NM_004739,NM_022830,NM_000327	chr11,chr11,chr11	-,-,+	MTA2,TUT1,ROM1	8454,-538,19313
chr16:19132083-19132993	chr16	+	19132151	19132874	True	NM_001034841,NM_015092,NR_028028	chr16,chr16,chr16	+,-,+	ITPRIPL2,SMG1,ITPRIPL2	-6957,-194425,-6957
chr3:100118017-100118735	chr3	+	100118254	100118690	True	NM_014820,NM_001085451	chr3,chr3	-,+	TOMM70A,LNP1	1585,1346
chr14:23511850-23512193	chr14	+	23511973	23512183	True	NM_001099780,NM_001144932,NM_002797,NM_001130725	chr14,chr14,chr14,chr14	+,-,-,-	PSMB11,PSMB5,PSMB5,PSMB5	-648,-7619,-7619,-7544
chrX:18440298-18441606	chrX	+	18440478	18441441	True	NR_033717,NM_003159	chrX,chrX	-,+	SCML2,CDKL5	-67634,2283
chr18:59842878-59843989	chr18	+	59842958	59843999	True	NM_012327,NM_020854	chr18,chr18	-,+	PIGN,KIAA1468	10343,10524
chr1:151777834-151779783	chr1	+	151778208	151779586	True	NR_024237,NM_001004432	chr1,chr1	+,-	LOC100132111,LINGO4	31358,-326
chr16:11835810-11836018	chr16	+	11835933	11836041	True	NM_003498,NM_015914	chr16,chr16	+,-	SNN,TXNDC11	-73695,657
chr17:72323502-72324350	chr17	+	72323540	72324135	True	NM_153209,NM_001080466	chr17,chr17	+,-	KIF19,BTBD17	-1240,33873
chr22:46696312-46696617	chr22	+	46696343	46696597	True	NR_024009,NM_016426	chr22,chr22	-,+	CN5H6.4,GTSE1	-3786,-3756
chr19:345350-346530	chr19	+	345400	346373	True	NM_017550,NM_130760	chr19,chr19	-,+	MIER2,MADCAM1	-609,150116
chr9:112886075-112887614	chr9	+	112886182	112887550	True	NM_001136562,NM_001012993	chr9,chr9	+,-	AKAP2,C9orf152	230,82913
chr19:49828224-49828945	chr19	+	49828318	49828960	True	NM_001040031,NM_014037,NM_001774	chr19,chr19,chr19	+,-,+	CD37,SLC6A16,CD37	9716,156,9716
chr18:20547202-20548126	chr18	+	20547465	20548023	True	NM_032933,NM_203292	chr18,chr18	-,+	C18orf45,RBBP8	469956,-33684
chr12:6877326-6878809	chr12	+	6877483	6878679	True	NM_002286,NR_026581,NM_002824	chr12,chr12,chr12	+,-,+	LAG3,MLF2,PTMS	2990,-14847,-1993
chr20:61146707-61146917	chr20	+	61146765	61146925	True	NR_033263,NR_029780,NM_178463	chr20,chr20,chr20	-,+,+	C20orf200,MIR1-1,C20orf166	1893,4587,734
chr2:208544774-208546146	chr2	+	208545343	208546086	True	NM_001142300,NM_001127395	chr2,chr2	+,-	CCNYL1,METTL21A	30177,-55370
chr11:12131283-12131512	chr11	+	12131354	12131448	True	NM_013253,NM_014632	chr11,chr11	-,+	DKK3,MICAL2	-100437,689
chr1:4477793-4479267	chr1	+	4477996	4479306	True	NR_027088,NM_207356	chr1,chr1	+,-	LOC284661,C1orf174	-5936,-661139
chr5:16504730-16505214	chr5	+	16504733	16505241	True	NM_019000,NM_006317	chr5,chr5	-,+	FAM134B,BASP1	3840,712508
chr2:121553479-121553987	chr2	+	121553656	121553992	True	NR_027181,NM_005270	chr2,chr2	-,+	LOC84931,GLI2	-329731,874
chr19:55270568-55271915	chr19	+	55270936	55271894	True	NM_014218,NM_001127255	chr19,chr19	+,-	KIR2DL1,NLRP7	9370,187029
chr19:55270568-55271915	chr19	+	55255178	55255228	False	NM_001127255,NM_015868	chr19,chr19	-,+	NLRP7,KIR2DL3	203695,-5255
chr19:55270568-55271915	chr19	+	55285815	55285865	False	NM_014218,NM_001127255	chr19,chr19	+,-	KIR2DL1,NLRP7	-4601,173058
chrX:148623134-148624472	chrX	+	148623178	148623744	True	NM_001171909,NM_001171907,NM_178124,NM_001171908,NR_027455	chrX,chrX,chrX,chrX,chrX	+,+,+,+,-	CXorf40A,CXorf40A,CXorf40A,CXorf40A,LOC100131434	2321,-710,-710,-710,-1866
chr13:20803379-20805378	chr13	+	20803616	20805416	True	NM_001110221,NM_001110219,NM_001190965,NM_006783,NM_001110220	chr13,chr13,chr13,chr13,chr13	-,-,+,-,-	GJB6,GJB6,ZMYM2,GJB6,GJB6	1168,1168,-270693,6,1168
chr10:73157079-73157362	chr10	+	73157155	73157345	True	NM_001164375,NM_001171930,NM_001171931,NM_001171932,NM_022124,NM_052836	chr10,chr10,chr10,chr10,chr10,chr10	-,+,+,+,+,+	C10orf105,CDH23,CDH23,CDH23,CDH23,CDH23	322283,-515,-515,-515,-515,-515
chr18:19746462-19746695	chr18	+	19746461	19746623	True	NM_005257,NM_172241	chr18,chr18	+,-	GATA6,CTAGE1	2792,251307
chr14:35511754-35513419	chr14	+	35512259	35513246	True	NM_001079519,NM_017917,NM_173607	chr14,chr14,chr14	+,-,+	FAM177A1,PPP2R3C,FAM177A1	866,78329,2363
chr2:190631845-190632074	chr2	+	190631914	190632112	True	NM_022353,NM_000534	chr2,chr2	-,+	OSGEPL1,PMS1	-3990,16698
chr17:6770753-6772572	chr17	+	6770842	6772175	True	NM_053285,NR_002710	chr17,chr17	-,+	TEKT1,ALOX12P2	-35782,-13998
chr1:1209762-1210261	chr1	+	1210028	1210294	True	NR_037668,NM_194458,NM_194315,NM_194457,NM_001130413,NM_058167	chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,-,+,-	SCNN1D,UBE2J2,UBE2J2,UBE2J2,SCNN1D,UBE2J2	343,-794,-794,-794,343,-794
chr5:81601167-81601421	chr5	+	81601167	81601401	True	NM_001017971,NM_001025	chr5,chr5	+,-	ATP6AP1L,RPS23	-55,-26932
chr9:127960631-127962068	chr9	+	127961059	127962023	True	NM_005833,NM_001123355,NM_002721,NM_001123369,NM_001174153,NM_001174152	chr9,chr9,chr9,chr9,chr9,chr9	+,-,-,-,+,+	RABEPK,PPP6C,PPP6C,PPP6C,RABEPK,RABEPK	838,-8841,-8841,-8841,797,797
chr1:228273288-228274107	chr1	+	228273320	228273940	True	NM_001024227,NM_001024226,NM_024319,NM_001024228,NM_001658	chr1,chr1,chr1,chr1,chr1	+,+,-,+,+	ARF1,ARF1,C1orf35,ARF1,ARF1	-2520,-3010,17140,-2520,-3010
chr1:43798931-43799240	chr1	+	43798943	43799194	True	NM_022821,NM_005373	chr1,chr1	-,+	ELOVL1,MPL	34562,4280
chr11:45306994-45307525	chr11	+	45307066	45307226	True	NM_020826,NM_020229	chr11,chr11	-,+	SYT13,PRDM11	708,-191553
chr5:70753233-70753986	chr5	+	70753497	70754002	True	NM_018429,NR_033968	chr5,chr5	+,-	BDP1,LOC100049076	-2125,-198375
chr6:14805214-14805499	chr6	+	14805222	14805528	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	440998,857811
chr2:46775458-46775792	chr2	+	46775581	46775767	True	NM_080653,NM_012249	chr2,chr2	-,+	ATP6V1E2,RHOQ	-28485,-5765
chr5:173169101-173171001	chr5	+	173169395	173170910	True	NM_030627,NM_138369	chr5,chr5	+,-	CPEB4,BOD1	144420,-125729
chr19:6433469-6434247	chr19	+	6433482	6433776	True	NM_139161,NM_003685,NM_173637	chr19,chr19,chr19	+,-,-	CRB3,KHSRP,SLC25A41	30483,-8660,64
chr3:97850860-97851966	chr3	+	97850969	97851774	True	NM_001005338,NM_001105580	chr3,chr3	+,-	OR5H1,GABRR3	-28,-97138
chr3:97850860-97851966	chr3	+	97887726	97887776	False	NM_001105580,NM_001005515	chr3,chr3	-,+	GABRR3,OR5H15	-133895,-233
chr1:224370068-224370584	chr1	+	224370158	224370536	True	NM_003676,NR_031574	chr1,chr1	+,-	DEGS1,MIR320B2	391,74366
chr7:96741253-96742395	chr7	+	96741465	96742134	True	NM_005221,NM_020186	chr7,chr7	-,+	DLX5,ACN9	-87322,3770
chr9:21803314-21803824	chr9	+	21803394	21803870	True	NM_058197,NM_002451	chr9,chr9	-,+	CDKN2A,MTAP	171006,-810
chr1:28586575-28586815	chr1	+	28586713	28586839	True	NM_031459,NM_014280	chr1,chr1	+,-	SESN2,DNAJC8	-801,-27171
chr11:93777703-93779557	chr11	+	93777859	93779073	True	NM_001098672,NM_001144871	chr11,chr11	+,-	HEPHL1,C11orf90	-23541,-194191
chr1:166141181-166142541	chr1	+	166141251	166142480	True	NM_001017961,NR_037431	chr1,chr1	-,+	FAM78B,MIR3658	-5293,-264157
chr5:173470908-173471724	chr5	+	173471169	173471675	True	NM_138369,NM_015980	chr5,chr5	-,+	BOD1,HMP19	-427503,1048
chr4:164415997-164416245	chr4	+	164416124	164416292	True	NM_032136,NM_018352	chr4,chr4	-,+	TKTL2,C4orf43	-21077,-502
chr10:7873600-7874671	chr10	+	7873687	7874492	True	NM_012311,NM_031923	chr10,chr10	-,+	KIN,TAF3	-43743,-13065
chr21:47470219-47470536	chr21	+	47470229	47470507	True	NM_058174,NM_006657	chr21,chr21	+,-	COL6A2,FTCD	47525,105024
chr14:74228391-74229307	chr14	+	74228402	74229296	True	NM_194278,NM_001146154	chr14,chr14	-,+	C14orf43,PTGR2	-1401,89237
chr19:37019750-37020569	chr19	+	37019773	37020490	True	NM_001012756,NM_001166036,NM_001166037,NR_036504,NM_001166038	chr19,chr19,chr19,chr19,chr19	-,-,-,+,-	ZNF260,ZNF260,ZNF260,LOC728752,ZNF260	-525,-525,-525,-39295,-525
chr8:105474506-105474842	chr8	+	105474539	105474855	True	NM_001385,NM_030788	chr8,chr8	-,+	DPYS,TM7SF4	4472,-122537
chr19:570966-571205	chr19	+	571046	571226	True	NM_198589,NM_005035,NM_001728,NM_198591	chr19,chr19,chr19,chr19	+,-,+,+	BSG,POLRMT,BSG,BSG	1310,62392,1310,98
chr6:170121566-170122984	chr6	+	170121623	170122938	True	NM_018288,NM_133325,NM_001029863	chr6,chr6,chr6	-,-,+	PHF10,PHF10,C6orf120	1218,1218,-19425
chr19:860281-860567	chr19	+	860520	860598	True	NM_001972,NM_001928,NM_005481	chr19,chr19,chr19	+,+,-	ELANE,CFD,MED16	-8280,-906,32670
chr20:4794946-4795215	chr20	+	4794957	4795161	True	NM_012409,NM_170774,NM_014737	chr20,chr20,chr20	+,-,-	PRND,RASSF2,RASSF2	-92458,658,9180
chr16:74729568-74729865	chr16	+	74729589	74729858	True	NM_152649,NM_032268,NM_001142497	chr16,chr16,chr16	-,+,-	MLKL,ZNRF1,MLKL	4982,303056,4982
chr3:185425255-185426761	chr3	+	185425381	185426681	True	NM_001007225,NR_027317	chr3,chr3	-,+	IGF2BP2,C3orf65	116196,4358
chr11:126138859-126139084	chr11	+	126138864	126139064	True	NM_001177842,NR_037648,NM_003139,NM_017547,NR_037647	chr11,chr11,chr11,chr11,chr11	-,+,-,+,+	SRPR,FOXRED1,SRPR,FOXRED1,FOXRED1	13,-3,13,20,20
chr15:71402338-71403287	chr15	+	71402371	71403302	True	NM_024817,NM_001102658	chr15,chr15	+,-	THSD4,CT62	30485,4587
chr5:140783645-140783902	chr5	+	140783645	140783937	True	NM_018925,NM_032090,NM_032100,NM_018921,NM_032099,NM_032089,NM_018926,NM_005642,NM_018913	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,+,-,+	PCDHGB5,PCDHGA10,PCDHGB6,PCDHGA9,PCDHGB5,PCDHGA9,PCDHGB6,TAF7,PCDHGA10	-6009,8805,3832,-1184,-6009,-1184,3832,-83294,8805
chr7:6628723-6629000	chr7	+	6628755	6629043	True	NM_024067,NM_001145118	chr7,chr7	+,-	C7orf26,GRID2IP	871,-37688
chr13:95364647-95364980	chr13	+	95364699	95364951	True	NM_180989,NM_007084	chr13,chr13	+,-	GPR180,SOX21	-110646,-310
chr1:9353840-9354514	chr1	+	9353921	9354523	True	NM_025106,NR_029610	chr1,chr1	+,-	SPSB1,MIR34A	-1031,-142085
chr10:94591281-94592125	chr10	+	94591512	94591985	True	NM_004969,NM_001013848	chr10,chr10	-,+	IDE,EXOC6	-257660,2484
chr2:174665924-174666847	chr2	+	174665943	174666862	True	NM_145810,NM_001017371	chr2,chr2	+,-	CDCA7,SP3	-446433,162137
chrX:107225806-107226245	chrX	+	107225994	107226248	True	NM_001170553,NM_031273	chrX,chrX	+,-	VSIG1,TEX13B	61951,-394
chr17:58215005-58216190	chr17	+	58215098	58216091	True	NM_000717,NR_027408	chr17,chr17	+,-	CA4,LOC653653	11210,-34818
chr6:168417741-168419352	chr6	+	168417897	168419309	True	NM_030615,NM_005355,NM_001129895	chr6,chr6,chr6	+,+,-	KIF25,KIF25,HGC6.3	77,77,-40278
chr12:114846485-114846785	chr12	+	114846555	114846829	True	NM_181486,NM_080718,NM_000192,NM_080717,NM_138432	chr12,chr12,chr12,chr12,chr12	-,-,-,-,+	TBX5,TBX5,TBX5,TBX5,SDSL	-2666,-4852,-308,-308,-986390
chr12:8214149-8215331	chr12	+	8214658	8215156	True	NM_004054,NM_015509	chr12,chr12	-,+	C3AR1,NECAP1	3851,19650
chrX:138772645-138773080	chrX	+	138772726	138773004	True	NM_001099855,NM_000133	chrX,chrX	-,+	MCF2,F9	17427,-159883
chr4:106507099-106508708	chr4	+	106507205	106508565	True	NM_176869,NM_017700	chr4,chr4	-,+	PPA2,ARHGEF38	-111978,-33480
chr3:51428216-51428454	chr3	+	51428387	51428499	True	NM_001171904,NM_006010,NM_013286	chr3,chr3,chr3	-,+,+	VPRBP,MANF,RBM15B	105569,-5746,199
chr14:92043346-92044263	chr14	+	92043347	92044107	True	NR_003709,NM_001080113	chr14,chr14	+,-	SNORA11B,C14orf184	-450628,-1964
chr17:42834598-42835775	chr17	+	42834935	42835709	True	NM_144609,NM_002390	chr17,chr17	-,+	CCDC43,ADAM11	-67770,858
chr17:64878774-64879717	chr17	+	64878906	64879697	True	NM_014877,NM_145811	chr17,chr17	-,+	HELZ,CACNG5	361685,-5574
chr10:98945514-98945807	chr10	+	98945572	98945850	True	NM_005479,NM_003061	chr10,chr10	+,-	FRAT1,SLIT1	133171,-99
chr19:12598931-12599210	chr19	+	12598931	12599099	True	NM_152601,NM_153358	chr19,chr19	-,+	ZNF709,ZNF791	-3299,122632
chr4:120244778-120245593	chr4	+	120245144	120245427	True	NM_000134,NM_019050	chr4,chr4	-,+	FABP2,USP53	-1828,-111413
chr9:134308232-134310174	chr9	+	134308649	134310189	True	NM_001135954,NM_013318	chr9,chr9	-,+	UCK1,PRRC2B	96523,-3223
chr13:30161960-30162731	chr13	+	30162086	30162633	True	NM_015233,NM_003045	chr13,chr13	+,-	MTUS2,SLC7A1	-159360,7242
chr11:8009158-8009463	chr11	+	8009243	8009510	True	NM_003754,NM_176821	chr11,chr11	+,-	EIF3F,NLRP10	-428,-24184
chr1:153522951-153523780	chr1	+	153522986	153523757	True	NM_002962,NM_002960,NM_019554,NM_002961,NM_006271	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	S100A5,S100A3,S100A4,S100A4,S100A1	-8745,-1252,-4704,-4704,77115
chr20:2674753-2675073	chr20	+	2674790	2675050	True	NM_174856,NM_001110514	chr20,chr20	-,+	IDH3B,EBF4	-29947,-1317
chr7:32511069-32511472	chr7	+	32511230	32511484	True	NM_015060,NM_012322	chr7,chr7	+,-	AVL9,LSM5	23691,18589
chr5:38545294-38545886	chr5	+	38545384	38545454	True	NM_001127671,NM_182801	chr5,chr5	-,+	LIFR,EGFLAM	11354,-99809
chr15:76135662-76135903	chr15	+	76135773	76135903	True	NM_001145335,NM_173469,NR_036198	chr15,chr15,chr15	+,+,-	UBE2Q2,UBE2Q2,MIR4313	481,-202,-81117
chr11:65428791-65429173	chr11	+	65428856	65429120	True	NM_021975,NM_153253,NM_001145138	chr11,chr11,chr11	-,+,-	RELA,SIPA1,RELA	1373,-21315,1373
chr1:17698464-17699537	chr1	+	17698817	17699554	True	NM_001136204,NM_207421	chr1,chr1	-,+	RCC2,PADI6	65553,-127
chr19:3627897-3628524	chr19	+	3628423	3628555	True	NM_021231,NM_001080543,NM_133261	chr19,chr19,chr19	-,-,+	C19orf29,C19orf29,GIPC3	-1610,-1610,-42905
chr2:47630754-47630997	chr2	+	47630757	47631037	True	NM_022055,NM_000251	chr2,chr2	-,+	KCNK12,MSH2	166483,-545
chr22:37496977-37498622	chr22	+	37497013	37498481	True	NM_024681,NM_153609	chr22,chr22	+,-	KCTD17,TMPRSS6	-49285,1262
chr1:203276276-203276520	chr1	+	203276467	203276531	True	NR_034151,NM_006763,NR_034150	chr1,chr1,chr1	-,+,-	LOC730227,BTG2,LOC730227	-2014,-1854,-2014
chr11:66722336-66722829	chr11	+	66722423	66722747	True	NM_000920,NM_001136485,NM_001040716	chr11,chr11,chr11	-,+,-	PC,C11orf86,PC	3150,20006,3150
chr7:4926214-4926707	chr7	+	4926234	4926626	True	NM_018059,NR_015449	chr7,chr7	-,+	RADIL,RNF216L	-2899,86989
chr7:5112085-5112379	chr7	+	5112086	5112298	True	NR_015343,NR_034163	chr7,chr7	+,-	LOC389458,ZNF890P	-446,71929
chr10:61111015-61111842	chr10	+	61111269	61111880	True	NM_001001971,NM_001143774	chr10,chr10	-,+	FAM13C,PHYHIPL	10522,-174101
chr3:42683224-42684052	chr3	+	42683407	42684085	True	NM_001201572,NM_145166	chr3,chr3	-,+	SEC22C,ZBTB47	-40835,11090
chr2:73927934-73928330	chr2	+	73927992	73928340	True	NM_016347,NR_003683	chr2,chr2	-,+	NAT8B,ALMS1P	177,-55997
chr1:120191489-120192015	chr1	+	120191490	120191979	True	NM_006623,NM_001080470	chr1,chr1	+,-	PHGDH,ZNF697	62439,-1100
chr6:15040152-15040878	chr6	+	15040399	15040595	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	205931,622744
chr5:750208-750484	chr5	+	750214	750464	True	NM_018140,NM_007030	chr5,chr5	+,-	CEP72,TPPP	-137860,-56704
chr5:750208-750484	chr5	+	842759	842819	False	NM_001166260,NM_024786	chr5,chr5	+,-	TRIP13,ZDHHC11	50149,8332
chr15:42840179-42840692	chr15	+	42840259	42840632	True	NM_153260,NM_001130447,NM_018097	chr15,chr15,chr15	-,+,+	LRRC57,HAUS2,HAUS2	420,378,378
chr15:65134240-65134876	chr15	+	65134394	65134912	True	NM_001195059,NM_025049,NM_025201	chr15,chr15,chr15	+,-,+	PLEKHO2,PIF1,PLEKHO2	-363,-16556,-363
chr13:26854554-26855115	chr13	+	26854566	26855148	True	NM_001260,NM_005977	chr13,chr13	+,-	CDK8,RNF6	-25861,-58058
chr12:81101020-81101645	chr12	+	81101030	81101536	True	NM_002469,NM_005593,NR_030348	chr12,chr12,chr12	+,+,-	MYF6,MYF5,MIR617	-6,9171,124924
chr2:46706756-46707240	chr2	+	46706889	46707273	True	NM_080653,NM_001145051	chr2,chr2	-,+	ATP6V1E2,LOC388946	39873,-236
chr10:65027070-65027850	chr10	+	65027196	65027871	True	NM_004241,NM_030759	chr10,chr10	-,+	JMJD1C,NRBF2	1168,-134247
chr10:20103868-20104217	chr10	+	20103888	20104265	True	NM_006393,NM_032812	chr10,chr10	-,+	NEBL,PLXDC2	1082317,1106
chr5:80262927-80263873	chr5	+	80263302	80263904	True	NM_006909,NM_000791	chr5,chr5	+,-	RASGRF2,DHFR	-6802,-312502
chr11:57159898-57161418	chr11	+	57160153	57161459	True	NM_002728,NM_002559	chr11,chr11	-,+	PRG2,P2RX3	-2023,-54256
chr5:126000441-126001679	chr5	+	126000600	126001526	True	NM_001202404,NM_207408	chr5,chr5	-,+	ALDH7A1,C5orf48	-69518,-33237
chr19:17489168-17489386	chr19	+	17489232	17489358	True	NM_031310,NM_133644	chr19,chr19	-,+	PLVAP,GTPBP3	-1095,-40957
chr8:144119611-144120267	chr8	+	144119618	144120170	True	NR_026913,NM_173687	chr8,chr8	-,+	LOC100133669,C8orf31	-19811,508
chr16:1663551-1663765	chr16	+	1663555	1663785	True	NM_020825,NM_014714	chr16,chr16	+,-	CRAMP1L,IFT140	855,-1446
chr16:21165580-21166563	chr16	+	21165734	21166212	True	NM_020422,NM_017539	chr16,chr16	+,-	TMEM159,DNAH3	3699,4600
chr3:182967334-182968297	chr3	+	182967387	182968066	True	NM_032047,NM_014398	chr3,chr3	+,-	B3GNT5,LAMP3	2965,-86720
chr10:51245322-51246067	chr10	+	51245437	51245511	True	NM_001077686,NM_002443	chr10,chr10	-,+	AGAP8,MSMB	1082,304041
chr10:51245322-51246067	chr10	+	46341823	46341897	False	NM_133446,NM_015262	chr10,chr10	-,+	AGAP4,FAM21C	1082,-119230
chr3:176910795-176911789	chr3	+	176911000	176911774	True	NM_024665,NM_181361	chr3,chr3	-,+	TBL1XR1,KCNMB2	3324,1342449
chr7:128165693-128165917	chr7	+	128165809	128165943	True	NM_183243,NM_018396	chr7,chr7	-,+	IMPDH1,METTL2B	-115773,-49077
chr7:128165693-128165917	chr17	+	60550614	60550666	False	NR_027486,NM_001112707,NM_006852	chr17,chr17,chr17	-,+,+	TBC1D3P2,TLK2,TLK2	-197598,5719,5719
chr1:117665184-117666297	chr1	+	117665200	117666242	True	NM_001145635,NR_030640,NM_025188	chr1,chr1,chr1	-,+,-	TRIM45,MIR942,TRIM45	-789,-27986,-789
chr21:16292718-16293315	chr21	+	16292860	16293182	True	NM_003489,NR_003087	chr21,chr21	-,+	NRIP1,ABCC13	144006,-646807
chr1:223536367-223536841	chr1	+	223536434	223536842	True	NM_017982,NM_152610,NM_001037175	chr1,chr1,chr1	-,+,-	SUSD4,C1orf65,SUSD4	752,29872,752
chr17:34961256-34963129	chr17	+	34962011	34962792	True	NM_024864,NM_001033580	chr17,chr17	+,-	MRM1,MYO19	-4037,-70706
chr7:44367134-44369062	chr7	+	44367222	44369056	True	NM_172078,NM_172079,NM_172081,NM_172080,NM_172083,NM_172082,NM_172084,NM_001220,NM_006555	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,-,-,-,+	CAMK2B,CAMK2B,CAMK2B,CAMK2B,CAMK2B,CAMK2B,CAMK2B,CAMK2B,YKT6	-1992,-1992,-1992,-1992,-1992,-1992,-1992,-1992,-126696
chr17:48636931-48637183	chr17	+	48636949	48637029	True	NM_198377,NM_198376,NM_001267,NM_198396,NM_198384,NM_198379,NM_198378,NM_198386,NM_198387,NM_198397,NM_198385,NM_198382,NM_198383,NM_198380,NM_018896,NM_198388	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,-,+,+,+,+,+,+,+,+,+,+,+,+,+	CACNA1G,CACNA1G,CHAD,CACNA1G,CACNA1G,CACNA1G,CACNA1G,CACNA1G,CACNA1G,CACNA1G,CACNA1G,CACNA1G,CACNA1G,CACNA1G,CACNA1G,CACNA1G	1419,1419,-90722,1419,1419,1419,1419,1419,1419,1419,1419,1419,1419,1419,1419,1419
chr1:248610945-248612604	chr1	+	248611150	248612534	True	NM_001004694,NM_001004136	chr1,chr1	-,+	OR2T29,OR2T2	110290,3564
chr1:248610945-248612604	chr1	-	248806125	248806851	False	NM_001001827,NM_001001824,NM_001013355	chr1,chr1,chr1	-,-,+	OR2T35,OR2T27,OR2G6	-3566,7384,-121228
chr12:50561561-50561765	chr12	+	50561597	50561731	True	NM_032901,NM_147190	chr12,chr12	+,-	C12orf62,LASS5	-55748,-500
chr12:12490417-12491922	chr12	+	12490771	12491967	True	NM_058169,NM_018050	chr12,chr12	+,-	LOH12CR1,MANSC1	18052,11252
chr1:48231981-48232980	chr1	+	48232212	48232914	True	NM_001194986,NM_004474	chr1,chr1	-,+	LOC388630,FOXD2	229698,-330574
chr13:99230507-99231628	chr13	+	99230511	99231672	True	NM_001032296,NR_036129	chr13,chr13	-,+	STK24,MIR3170	-1115,-369784
chr9:117271675-117271934	chr9	+	117271770	117271989	True	NM_001083885,NM_004888,NM_001173425,NM_015404	chr9,chr9,chr9,chr9	-,+,-,-	DFNB31,ATP6V1G1,DFNB31,DFNB31	-6275,78004,-4034,-4034
chr12:105629291-105629510	chr12	+	105629290	105629486	True	NM_018171,NM_001145199	chr12,chr12	-,+	APPL2,C12orf75	572,94927
chr19:38918785-38919764	chr19	+	38918951	38919813	True	NM_170604,NM_001146204,NM_001146205,NM_001146206,NM_001146207,NM_001146202,NM_001146203,NM_000540,NM_001042723	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,+,+	RASGRP4,RASGRP4,RASGRP4,RASGRP4,RASGRP4,RASGRP4,RASGRP4,RYR1,RYR1	-2006,-2006,-2006,-2006,-2006,-2006,-2006,4526,4526
chr16:3142348-3142566	chr16	+	3142357	3142603	True	NM_001042428,NM_032805	chr16,chr16	+,-	ZNF205,ZSCAN10	19959,308
chr7:117510057-117510838	chr7	+	117510101	117510869	True	NM_033427,NM_016200	chr7,chr7	-,+	CTTNBP2,NAA38	2742,313216
chr19:46141779-46142217	chr19	+	46141783	46142153	True	NR_029886,NM_012155,NM_001193268,NM_001193269,NM_000164,NR_034098	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,+,-	MIR330,EML2,EML2,EML2,GIPR,EML2	248,578,6678,4888,29348,578
chr13:31481087-31481522	chr13	+	31481114	31481478	True	NM_006644,NM_032849	chr13,chr13	-,+	HSPH1,C13orf33	254695,-853
chr3:195282891-195284782	chr3	+	195282906	195284783	True	NR_003265,NM_006241	chr3,chr3	+,-	SDHAP2,PPP1R2	100126,-12682
chr10:75004943-75005360	chr10	+	75004948	75005403	True	NM_173348,NM_015190,NM_016065	chr10,chr10,chr10	+,-,-	FAM149B1,DNAJC9,MRPS16	-77123,1672,7098
chr3:52260162-52260371	chr3	+	52260296	52260370	True	NM_017442,NM_144641	chr3,chr3	-,+	TLR9,PPM1M	-117,19438
chr2:208634418-208634640	chr2	+	208634533	208634621	True	NM_152523,NM_003468	chr2,chr2	+,-	CCNYL1,FZD5	-58320,-390
chr10:38384968-38385438	chr10	+	38385356	38385484	True	NM_003421,NM_001007094,NM_145011,NM_001178101	chr10,chr10,chr10,chr10	+,+,-,+	ZNF37A,ZNF37A,ZNF25,ZNF37A	-2144,-2144,-119903,-2144
chr11:55930203-55930658	chr11	+	55930428	55930545	True	NM_001004058,NM_001005492	chr11,chr11	-,+	OR8K5,OR5J2	-2635,13548
chr6:165558872-165560301	chr6	+	165558935	165560217	True	NM_144980,NR_027284	chr6,chr6	-,+	C6orf118,LOC441177	162950,840821
chr12:49246577-49248248	chr12	+	49246643	49247821	True	NM_004818,NM_000725	chr12,chr12	-,+	DDX23,CACNB3	-686,-34191
chrX:101975849-101976428	chrX	+	101975901	101976449	True	NM_030639,NM_001184875,NM_001184874,NM_001184876,NM_001004051,NM_138437,NM_001142528,NM_021992,NM_001142525,NM_001142524,NM_001142527,NM_001142526	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,+,+,-,+,+,+,+	BHLHB9,GPRASP2,GPRASP2,GPRASP2,GPRASP2,GPRASP2,BHLHB9,TMSB15A,BHLHB9,BHLHB9,BHLHB9,BHLHB9	-310,-8848,-8848,-8848,-8848,-8848,-310,-204202,-310,-310,-310,-310
chr19:37871452-37871719	chr19	+	37871451	37871728	True	NM_032453,NM_152484	chr19,chr19	+,-	ZNF527,ZNF569	-9444,86661
chr19:46805001-46805680	chr19	+	46805150	46805247	True	NM_152796,NM_152795,NM_152794,NM_022462,NM_032040	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	HIF3A,HIF3A,HIF3A,HIF3A,CCDC8	-3581,-4911,1608,-3581,111735
chr6:11027643-11029433	chr6	+	11027681	11029174	True	NM_017770,NM_001135575	chr6,chr6	-,+	ELOVL2,LOC221710	15507,65091
chr13:33158585-33158823	chr13	+	33158585	33158725	True	NM_033111,NM_015032	chr13,chr13	-,+	N4BP2L2,PDS5B	-45649,1838
chr19:48543061-48543831	chr19	+	48543341	48543823	True	NM_022142,NM_019855	chr19,chr19	+,-	ELSPBP1,CABP5	-45485,3531
chr4:25506209-25506767	chr4	+	25506215	25506767	True	NM_013367,NM_016955	chr4,chr4	+,-	ANAPC4,SEPSECS	-127418,-344011
chr7:64137847-64139586	chr7	+	64137906	64139595	True	NM_001130022,NM_016220	chr7,chr7	-,+	ZNF680,ZNF107	-114401,-11447
chr19:12902222-12902436	chr19	+	12902224	12902288	True	NM_002229,NM_005809	chr19,chr19	+,-	JUNB,PRDX2	21,10456
chr9:46578889-46580877	chr9	+	46579278	46580899	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2948548,106666
chr9:46578889-46580877	chr9	-	42126138	42127759	False	NR_003670,NM_001012421	chr9,chr9	-,+	KGFLP2,ANKRD20A2	-106554,240543
chr9:46578889-46580877	chr9	+	45564377	45565409	False	NM_001145196,NR_024060	chr9,chr9	-,+	FAM75A6,FAM27A	-1933647,161619
chr9:46578889-46580877	chr9	+	45950623	45951655	False	NM_001145196,NR_024060	chr9,chr9	-,+	FAM75A6,FAM27A	-2319893,-223652
chr16:30218077-30218925	chr16	+	30218378	30218811	True	NR_002556,NR_002557,NM_001017390,NM_177552	chr16,chr16,chr16,chr16	-,-,+,+	LOC388242,LOC613038,SULT1A4,SULT1A3	-130,-130,-7880,-7880
chr16:30218077-30218925	chr16	+	29479029	29479465	False	NR_002556,NR_002557,NM_001017390,NM_177552	chr16,chr16,chr16,chr16	-,-,+,+	LOC388242,LOC613038,SULT1A4,SULT1A3	-130,-130,-7873,-7873
chr22:30870083-30871226	chr22	+	30870268	30871135	True	NR_001580,NM_174975,NM_016498	chr22,chr22,chr22	-,-,+	SDC4P,SEC14L3,MTFP1	6658,-2234,-48709
chrX:52257997-52259378	chrX	+	52258010	52259427	True	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,-,-,-,-,-,-,-,-,-,-	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	833,777,777,986,777,777,777,833,986,833,986,986,986,833,833
chrX:52257997-52259378	chrX	-	52239745	52241162	False	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,+,+,+,+,+,+,+,+,+,+	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	-833,-777,-777,-986,-777,-777,-777,-833,-986,-833,-986,-986,-986,-833,-833
chrX:52257997-52259378	chrX	-	52512696	52514113	False	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,+,+,+,+,+,+,+,+,+,+	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	-833,-777,-777,-986,-777,-777,-777,-833,-986,-833,-986,-986,-986,-833,-833
chrX:52257997-52259378	chrX	+	52530950	52532367	False	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,-,-,-,-,-,-,-,-,-,-	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	833,777,777,986,777,777,777,833,986,833,986,986,986,833,833
chrX:52257997-52259378	chrX	+	52543844	52545261	False	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,-,-,-,-,-,-,-,-,-,-	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	833,777,777,986,777,777,777,833,986,833,986,986,986,833,833
chr17:80057959-80058314	chr17	+	80058202	80058360	True	NM_004104,NM_212492	chr17,chr17	-,+	FASN,GPS1	-2096,-48490
chr3:195939008-195940107	chr3	+	195939301	195940034	True	NM_001039617,NM_152672	chr3,chr3	-,+	ZDHHC19,OSTalpha	-1001,3348
chr17:39155879-39157347	chr17	+	39156099	39157280	True	NM_031959,NM_031958,NM_033061,NM_033185	chr17,chr17,chr17,chr17	-,-,+,-	KRTAP3-2,KRTAP3-1,KRTAP4-7,KRTAP3-3	39,8151,83178,-5714
chr21:45661274-45661740	chr21	+	45661279	45661503	True	NM_000383,NM_015259	chr21,chr21	+,-	AIRE,ICOSLG	44259,-445
chr7:99677248-99678088	chr7	+	99677693	99677959	True	NM_032924,NM_006833,NM_017715	chr7,chr7,chr7	-,+,-	ZNF3,COPS6,ZNF3	1462,8623,1462
chr5:111093886-111095164	chr5	+	111094193	111094986	True	NM_001142479,NM_001142478,NR_015370,NM_004772,NM_001142482,NM_001142483,NM_001142480,NM_001142481,NM_001142477,NM_001142476	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,-,+,-,-,-,-,-,-,-	C5orf13,C5orf13,NCRNA00219,C5orf13,C5orf13,C5orf13,C5orf13,C5orf13,C5orf13,C5orf13	-941,-794,401236,-1248,-1089,-2245,-941,-1087,-400,-278
chr13:41703894-41704901	chr13	+	41704575	41704923	True	NM_007187,NM_152903	chr13,chr13	+,-	WBP4,KBTBD6	-68936,2063
chr11:107731281-107732022	chr11	+	107731539	107732025	True	NM_017515,NM_017516	chr11,chr11	-,+	SLC35F2,RAB39	-1625,67251
chr12:6771647-6772300	chr12	+	6771733	6772175	True	NM_001127586,NM_001164094,NM_001127584,NM_001127585,NM_001127582,NM_001127583,NM_016162	chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,+,-,-,-,-,-	ING4,COPS7A,ING4,ING4,ING4,ING4,ING4	183,60974,183,183,183,183,183
chr20:32849462-32850466	chr20	+	32849952	32850506	True	NM_001672,NM_000687	chr20,chr20	+,-	ASIP,AHCY	-1845,40759
chr19:36104341-36104784	chr19	+	36104499	36104785	True	NM_000704,NM_015302	chr19,chr19	-,+	ATP4A,HAUS5	-49939,-904
chr6:2836124-2836472	chr6	+	2836168	2836489	True	NM_130395,NM_030666	chr6,chr6	+,-	WRNIP1,SERPINB1	-70553,5647
chrX:15511008-15511364	chrX	+	15511051	15511287	True	NM_001018109,NM_003662,NR_037859,NM_203281	chrX,chrX,chrX,chrX	-,-,-,+	PIR,PIR,PIR-FIGF,BMX	474,474,-1619,7612
chr19:3699296-3699546	chr19	+	3699523	3699593	True	NM_014428,NM_012398,NM_001195733	chr19,chr19,chr19	+,-,-	TJP3,PIP5K1C,PIP5K1C	28780,934,934
chr17:43225079-43225751	chr17	+	43225187	43225656	True	NM_133373,NM_006460	chr17,chr17	-,+	PLCD3,HEXIM1	-15296,-555
chr11:113745033-113745653	chr11	+	113745223	113745583	True	NM_006028,NM_020886	chr11,chr11	+,-	HTR3B,USP28	30005,723
chrX:68003668-68004716	chr4	-	79102556	79102624	True	NM_025074,NM_144571	chr4,chr4	+,-	FRAS1,CNOT6L	-123901,-362012
chr8:73450040-73450297	chr8	+	73450161	73450289	True	NM_004770,NR_033867	chr8,chr8	+,-	KCNB2,LOC392232	-586,-286292
chr2:86682650-86682934	chr2	+	86682715	86682796	True	NM_001146688,NM_001005753	chr2,chr2	+,-	KDM3A,VPS24	-14188,107879
chr7:110733757-110734285	chr7	+	110733781	110734295	True	NM_018334,NM_032549,NM_001099658,NM_001099660	chr7,chr7,chr7,chr7	+,-,+,+	LRRN3,IMMP2L,LRRN3,LRRN3	-2770,468110,-2770,-2770
chr5:180236650-180236919	chr5	+	180236654	180236837	True	NM_001114617,NM_001114618,NM_001114619,NR_027183,NM_002406,NM_001114620	chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,+,-,-	MGAT1,MGAT1,MGAT1,LOC729678,MGAT1,MGAT1	350,30,-5752,20121,-6606,-5752
chr19:51069552-51069962	chr19	+	51069843	51070011	True	NR_004384,NM_001080457	chr19,chr19	+,-	SNAR-F,LRRC4B	38208,1341
chr7:65543987-65544697	chr7	+	65544202	65544484	True	NM_000181,NM_001024943,NM_001024944,NM_001024946,NM_000048	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	GUSB,ASL,ASL,ASL,ASL	-96901,-3419,-3419,-3419,-3477
chr16:70562890-70563711	chr16	+	70562921	70563524	True	NM_015386,NR_037420,NR_003696,NR_003079,NM_012426,NM_001195139	chr16,chr16,chr16,chr16,chr16,chr16	-,+,+,+,+,-	COG4,MIR3647,SNORD111B,SNORD111,SF3B3,COG4	-5464,-123,-120,8383,-5284,-5464
chr1:53661344-53661764	chr1	+	53661390	53661784	True	NM_017887,NM_000098	chr1,chr1	-,+	C1orf123,CPT2	24555,316
chr2:202446195-202448151	chr2	+	202446811	202448148	True	NM_001168216,NM_018571	chr2,chr2	-,+	ALS2CR11,STRADB	35813,-130478
chr20:37597845-37599174	chr20	+	37597869	37599167	True	NM_001190809,NR_033905,NR_027124,NM_021931	chr20,chr20,chr20,chr20	+,+,-,+	DHX35,DHX35,LOC339568,DHX35	-6940,-6940,254281,-6940
chr1:28993838-28994059	chr1	+	28993884	28993977	True	NM_024482,NM_005644,NM_006582	chr1,chr1,chr1	+,-,+	GMEB1,TAF12,GMEB1	1262,-24280,1262
chr19:10395083-10395285	chr19	+	10395095	10395333	True	NM_003259,NM_001544,NM_001039132,NM_022377,NM_001103167	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	ICAM5,ICAM4,ICAM4,ICAM4,ZGLP1	5321,2316,2316,2316,24950
chr11:46738341-46740030	chr11	+	46739671	46740075	True	NM_000506,NM_004308	chr11,chr11	+,-	F2,ARHGAP1	667,-17551
chr7:16502283-16502565	chr7	+	16502285	16502585	True	NM_001195280,NM_015464	chr7,chr7	+,-	LOC100506049,SOSTDC1	63919,2939
chr1:26487641-26487986	chr1	+	26487837	26487905	True	NM_015871,NM_024869,NM_032588	chr1,chr1,chr1	+,+,-	ZNF593,GRRP1,TRIM63	8482,-2377,-93716
chr19:9609540-9610004	chr19	+	9609548	9609813	True	NM_152476,NM_001172651	chr19,chr19	-,+	ZNF560,ZNF177	-269,-122607
chr16:27415538-27416647	chr16	+	27415545	27416694	True	NM_181078,NM_181079,NR_037158	chr16,chr16,chr16	+,+,-	IL21R,IL21R,LOC283888	-2113,-2113,48075
chr18:39093099-39094665	chr18	+	39093136	39094565	True	NM_002647,NR_002838	chr18,chr18	+,-	PIK3C3,KC6	440633,6049
chr22:38885786-38886380	chr22	+	38885867	38886419	True	NM_030881,NM_001098505,NM_006855	chr22,chr22,chr22	-,-,+	DDX17,DDX17,KDELR3	-1332,-1332,-21835
chr22:38903446-38903991	chr22	+	38903474	38903920	True	NM_006855,NM_001098504,NM_006386	chr22,chr22,chr22	+,-,-	KDELR3,DDX17,DDX17	-39442,-1129,-1129
chr10:120514472-120514733	chr10	+	120514489	120514627	True	NM_199461,NM_153810	chr10,chr10	+,-	NANOS1,C10orf46	274600,181
chr8:128808162-128808960	chr8	+	128808229	128808986	True	NR_031609,NR_024393,NR_003367	chr8,chr8,chr8	+,-,+	MIR1204,LOC727677,PVT1	-72,-313845,-1501
chr3:97742220-97742921	chr3	+	97742283	97742927	True	NM_001105580,NM_054106	chr3,chr3	-,+	GABRR3,OR5AC2	10954,63089
chr17:7186491-7187412	chr17	+	7186513	7187429	True	NM_001042,NM_015982	chr17,chr17	+,-	SLC2A4,YBX2	-1510,10497
chr19:38827305-38827543	chr19	+	38827366	38827484	True	NM_001145463,NM_021185	chr19,chr19	-,+	YIF1B,CATSPERG	-20760,-974
chr8:107669776-107670046	chr8	+	107669851	107670017	True	NM_139166,NM_181354	chr8,chr8	-,+	ABRA,OXR1	112505,18
chr10:21808840-21810069	chr10	+	21808909	21810070	True	NM_207371,NM_001195627	chr10,chr10	-,+	C10orf140,MLLT10	4591,13030
chr2:216301822-216302686	chr2	+	216302056	216302718	True	NM_004044,NM_002026,NM_054034,NM_212476,NM_212474,NM_212482,NM_212478	chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-,-	ATIC,FN1,FN1,FN1,FN1,FN1,FN1	-125441,-1265,-1265,-1265,-1265,-1265,-1265
chr19:52692947-52693173	chr19	+	52693010	52693202	True	NM_001102657,NR_033500,NM_014225	chr19,chr19,chr19	-,+,+	ZNF836,PPP2R1A,PPP2R1A	-18114,-6,-6
chr18:37308348-37308788	chr18	+	37308423	37308587	True	NR_024391,NR_036202	chr18,chr18	-,+	LOC647946,MIR4318	23424,-2071384
chr16:32894107-32894664	chr16	+	32894174	32894652	True	NR_003083,NM_016212	chr16,chr16	-,+	SLC6A10P,TP53TG3	1861,310327
chr16:32894107-32894664	chr16	-	33780671	33781149	False	NR_033866,NM_001205265	chr16,chr16	-,+	LOC390705,TP53TG3B	-481969,-518602
chr11:74698780-74699468	chr11	+	74698878	74699507	True	NM_006656,NM_182969	chr11,chr11	+,-	NEU3,XRRA1	442,-38646
chr17:45608016-45608257	chr17	+	45608042	45608212	True	NR_033934,NM_006310	chr17,chr17	-,+	MRPL45P2,NPEPPS	-38056,231
chr17:80231919-80232618	chr17	+	80231932	80232652	True	NM_001893,NM_001042423,NM_139062	chr17,chr17,chr17	-,+,-	CSNK1D,SLC16A3,CSNK1D	-338,-41839,-338
chr15:67433468-67434699	chr15	+	67433588	67434700	True	NM_001145103,NM_024666	chr15,chr15	+,-	SMAD3,AAGAB	-3287,112424
chr1:93545119-93546207	chr1	+	93545251	93546251	True	NM_001167830,NM_001164392,NM_001164393,NM_007358,NM_001164391	chr1,chr1,chr1,chr1,chr1	-,+,+,+,+	TMED5,MTF2,MTF2,MTF2,MTF2	100051,-510,-510,-510,-510
chr13:25879596-25880008	chr13	+	25879606	25880034	True	NM_001008564,NM_004685,NM_014089	chr13,chr13,chr13	+,-,+	NUPL1,MTMR6,NUPL1	-3991,-17902,-3991
chr11:27064145-27064701	chr11	+	27064315	27064533	True	NM_003986,NM_030771	chr11,chr11	+,-	BBOX1,CCDC34	-1869,320319
chr2:95691794-95692113	chr2	+	95691972	95692127	True	NR_037597,NM_022440,NM_022438,NM_002371,NM_022439	chr2,chr2,chr2,chr2,chr2	-,+,+,+,+	LOC442028,MAL,MAL,MAL,MAL	-78885,-544,-544,-544,-544
chr10:131265857-131266662	chr10	+	131266015	131266663	True	NM_002412,NR_036179	chr10,chr10	+,-	MGMT,MIR4297	-614,375025
chr15:65713577-65713868	chr15	+	65713586	65713906	True	NM_020962,NM_016395	chr15,chr15	-,+	IGDCC4,PTPLAD1	1554,108920
chr20:34359697-34359920	chr20	+	34359734	34359892	True	NM_184234,NM_016436	chr20,chr20	-,+	RBM39,PHF20	-29541,30
chr19:22608047-22608926	chr19	+	22608242	22608766	True	NR_033899,NM_001098626	chr19,chr19	+,-	LOC440518,ZNF98	170292,-3094
chr7:5253609-5254007	chr7	+	5253622	5253948	True	NM_001033520,NR_034163	chr7,chr7	+,-	WIPI2,ZNF890P	13,-69445
chr7:135242212-135242646	chr7	+	135242212	135242572	True	NM_015135,NM_001190848	chr7,chr7	+,-	NUP205,CNOT4	89,-47337
chr11:59223386-59225209	chr11	+	59223411	59225246	True	NM_001004708,NM_001001954	chr11,chr11	+,-	OR4D6,OR5A2	77,-32985
chrX:21958860-21959122	chrX	+	21958946	21959138	True	NM_004595,NM_014332	chrX,chrX	+,-	SMS,SMPX	-282,-182716
chr14:45723423-45724418	chr14	+	45723425	45724288	True	NM_018353,NM_020937	chr14,chr14	-,+	MIS18BP1,FANCM	-820,-118340
chr11:18346909-18347991	chr11	+	18347039	18347709	True	NM_007216,NM_005316,NM_181508,NM_001142307,NM_181507	chr11,chr11,chr11,chr11,chr11	-,+,-,+,-	HPS5,GTF2H1,HPS5,GTF2H1,HPS5	-3318,-3275,-3318,-3275,-3318
chr20:45526866-45528048	chr20	+	45527218	45528066	True	NM_005244,NM_172110,NM_033550	chr20,chr20,chr20	+,+,-	EYA2,EYA2,TP53RK	-4014,-4014,-208942
chr1:114424421-114424986	chr1	+	114424470	114424990	True	NM_001010922,NM_022836	chr1,chr1	-,+	BCL2L15,DCLRE1B	5229,22924
chr1:78244907-78245150	chr1	+	78244906	78245205	True	NM_201626,NM_198549	chr1,chr1	-,+	USP33,FAM73A	-19369,103
chr7:26579289-26580669	chr7	+	26579289	26580633	True	NR_022006,NM_001145531	chr7,chr7	-,+	KIAA0087,C7orf71	-845,96856
chr19:58143189-58143827	chr19	+	58143390	58143868	True	NM_198855,NM_017879,NM_006385	chr19,chr19,chr19	+,-,+	ZNF211,ZNF416,ZNF211	666,-53147,666
chr17:61698219-61698530	chr17	+	61698404	61698560	True	NM_002401,NM_203351,NM_030576	chr17,chr17,chr17	+,+,-	MAP3K3,MAP3K3,LIMD2	1240,1240,79009
chr11:31393285-31393663	chr11	+	31393284	31393365	True	NM_181706,NM_181807	chr11,chr11	+,-	DNAJC24,DCDC1	-1967,-1927
chr6:116579466-116579786	chr6	+	116579467	116579749	True	NM_021648,NM_001080976	chr6,chr6	-,+	TSPYL4,DSE	-4206,21533
chr16:834199-834424	chr16	+	834229	834355	True	NM_001025190,NM_058192,NM_022092	chr16,chr16,chr16	-,-,+	MSLNL,RPUSD1,CHTF18	-1303,4078,4266
chr15:101794889-101795142	chr15	+	101794900	101795136	True	NM_014918,NM_024652	chr15,chr15	-,+	CHSY1,LRRK1	-2763,-335493
chr5:148521888-148522200	chr5	+	148522115	148522185	True	NM_024577,NM_014945	chr5,chr5	-,+	SH3TC2,ABLIM3	-79378,-1112
chr19:58403413-58405006	chr19	+	58403697	58404353	True	NM_001144989,NM_032828	chr19,chr19	-,+	ZNF814,ZNF587	-3255,-42568
chr14:77351677-77351896	chr14	+	77351688	77351812	True	NM_015305,NM_194287	chr14,chr14	-,+	ANGEL1,C14orf166B	-72405,-59014
chr2:74903126-74904187	chr2	+	74903159	74903885	True	NM_138804,NM_004263	chr2,chr2	-,+	C2orf65,SEMA4F	-27995,-21817
chrX:103026790-103027228	chrX	+	103026837	103027267	True	NM_000533,NM_001172285,NM_001128834,NM_199478	chrX,chrX,chrX,chrX	+,-,+,+	PLP1,GLRA4,PLP1,PLP1	4486,-43285,4171,4486
chr20:45946889-45947224	chr20	+	45946908	45947264	True	NR_024594,NM_012408	chr20,chr20	+,-	LOC100131496,ZMYND8	2,38262
chr11:128456696-128457398	chr11	+	128456796	128457435	True	NM_001167681,NM_001143820	chr11,chr11	+,-	FLI1,ETS1	106375,68
chr8:10692327-10693129	chr8	+	10692546	10693155	True	NM_001040032,NR_031711,NM_017884	chr8,chr8,chr8	+,-,-	C8orf74,MIR1322,PINX1	-162450,-9593,4195
chr13:99999080-99999566	chr13	+	99999101	99999567	True	NM_004951,NR_030353,NR_024013	chr13,chr13,chr13	-,+,+	GPR183,MIR623,FKSG29	-39352,8817,4106
chr17:16693951-16694419	chr17	+	16694122	16694196	True	NR_026810,NR_029392,NR_003190	chr17,chr17,chr17	+,-,+	FAM106C,KRT16P2,LOC162632	-2119,42001,-3970
chr17:16693951-16694419	chr17	+	58252624	58252674	False	NM_000717,NR_002999	chr17,chr17	+,-	CA4,SCARNA20	-25373,56382
chr17:16693951-16694419	chr17	-	18428136	18428186	False	NR_026809,NR_003554,NM_001040078	chr17,chr17,chr17	-,-,+	FAM106A,LOC220594,LGALS9C	2024,-3570,-48088
chr17:16693951-16694419	chr17	+	20322695	20322745	False	NR_023380,NM_001042685	chr17,chr17	+,-	CCDC144C,LGALS9B	-98259,48153
chr11:94278846-94279066	chr11	+	94278845	94279017	True	NM_005591,NM_002033	chr11,chr11	-,+	MRE11A,FUT4	-51805,-1879
chrX:129300255-129300962	chrX	+	129300278	129301005	True	NM_001130847,NM_004794,NM_004208,NM_145812,NM_145813	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	AIFM1,RAB33A,AIFM1,AIFM1,AIFM1	-417,4767,-417,-417,-417
chr1:12705721-12706246	chr1	+	12705905	12706237	True	NM_001013630,NM_004753	chr1,chr1	+,-	AADACL4,DHRS3	-1397,-28085
chr7:5824306-5824816	chr7	+	5824705	5824865	True	NR_023382,NM_207111,NM_207116	chr7,chr7,chr7	+,-,-	ZNF815,RNF216,RNF216	37925,-3344,-3344
chr8:146016776-146016988	chr8	+	146016822	146017028	True	NM_000973,NM_033301,NM_030580,NM_213605	chr8,chr8,chr8,chr8	-,-,-,+	RPL8,RPL8,ZNF34,ZNF517	827,751,-4097,7232
chr1:233756770-233757722	chr1	+	233756790	233757657	True	NM_002245,NM_014801	chr1,chr1	+,-	KCNK1,PCNXL2	-7104,-325331
chr10:105992123-105992386	chr10	+	105992146	105992434	True	NM_001191003,NM_025145	chr10,chr10	+,-	GSTO1,WDR96	21517,-26
chr16:10670768-10671220	chr16	+	10670783	10671247	True	NM_024997,NM_001424	chr16,chr16	+,-	ATF7IP2,EMP2	-148109,3342
chr11:120895028-120895271	chr11	+	120895056	120895246	True	NM_001130047,NM_012101,NM_152715	chr11,chr11,chr11	+,-,+	TBCEL,TRIM29,TBCEL	-304,-886193,-294
chr12:49732995-49733342	chr12	+	49733011	49733335	True	NM_001008223,NM_024902	chr12,chr12	-,+	C1QL4,DNAJC22	-2040,7705
chr14:65410751-65411065	chr14	+	65410790	65411092	True	NM_001202559,NM_002083	chr14,chr14	+,-	CHURC1-FNTB,GPX2	-29762,-1259
chr5:179248871-179250320	chr5	+	179249033	179250060	True	NM_014275,NM_003900	chr5,chr5	-,+	MGAT4B,SQSTM1	-15081,-1255
chr1:3669373-3669590	chr1	+	3669425	3669629	True	NR_033709,NR_033708,NR_033710,NR_033711,NR_033712,NM_152492	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,+	KIAA0495,KIAA0495,KIAA0495,KIAA0495,KIAA0495,CCDC27	-5488,-5488,-5488,-5488,-6090,-511
chr2:136725756-136726390	chr2	+	136725875	136726157	True	NM_001349,NM_014607	chr2,chr2	-,+	DARS,UBXN4	17117,-226739
chr5:122860277-122861095	chr5	+	122860467	122861005	True	NM_004384,NM_153223	chr5,chr5	+,-	CSNK1G3,CEP120	-12731,-101181
chr3:93734515-93735532	chr3	+	93734574	93735471	True	NR_033427,NM_001001850	chr3,chr3	+,-	ARL13B,STX19	-35651,12042
chr19:17420180-17420566	chr19	+	17420193	17420407	True	NM_024050,NM_024527,NM_023937	chr19,chr19,chr19	+,-,+	DDA1,ABHD8,MRPL34	37,-5911,-3767
chr17:79010829-79011200	chr17	+	79010839	79011247	True	NM_001144888,NR_026857,NM_017450,NM_017451,NM_006340	chr17,chr17,chr17,chr17,chr17	+,-,+,+,+	BAIAP2,FLJ90757,BAIAP2,BAIAP2,BAIAP2	-1944,-2320,-1944,-1944,-1944
chr18:75698906-75699343	chr18	+	75698958	75699210	True	NM_001480,NM_001025100	chr18,chr18	+,-	GALR1,MBP	-737008,-854184
chr19:55691086-55691510	chr19	+	55691108	55691524	True	NM_017729,NM_003180	chr19,chr19	+,-	EPS8L1,SYT5	-99399,246
chr2:201464096-201464548	chr2	+	201464095	201464481	True	NM_001159,NM_152387	chr2,chr2	+,-	AOX1,KCTD18	-13415,-89303
chr18:21604164-21604991	chr18	+	21604297	21604783	True	NM_001135993,NR_024232,NM_018030	chr18,chr18,chr18	+,+,-	TTC39C,TTC39C,OSBPL1A	-9979,-9979,247463
chr20:62249105-62249502	chr20	+	62249274	62249548	True	NM_016434,NM_012384	chr20,chr20	+,-	RTEL1,GMEB2	39614,8883
chr2:208635968-208636508	chr2	+	208636036	208636516	True	NM_152523,NM_003468	chr2,chr2	+,-	CCNYL1,FZD5	-59823,-1893
chr16:22569497-22570284	chr16	+	22569694	22570082	True	NR_003676,NR_027460	chr16,chr16	+,-	LOC653786,RRN3P3	-12728,-120658
chr16:22569497-22570284	chr16	+	21753572	21753960	False	NM_170664,NR_003370	chr16,chr16	+,-	OTOA,RRN3P1	-37341,76595
chr7:128865588-128867268	chr7	+	128865616	128866517	True	NM_001130720,NM_015328,NR_034053	chr7,chr7,chr7	+,+,-	AHCYL2,AHCYL2,TNPO3	-812,-812,-170389
chr19:496656-497334	chr19	+	496710	497251	True	NM_130762,NM_182577,NM_130760	chr19,chr19,chr19	+,-,+	MADCAM1,ODF3L2,MADCAM1	-271,-21727,-271
chr11:61447371-61447641	chr11	+	61447381	61447469	True	NR_026882,NM_006133	chr11,chr11	-,+	DKFZP434K028,DAGLA	77717,435
chr1:205412906-205414117	chr1	+	205413055	205414096	True	NM_002596,NR_029893	chr1,chr1	+,-	CDK18,MIR135B	59587,3480
chr1:158724360-158725342	chr1	+	158724489	158725379	True	NM_001005185,NM_001005184	chr1,chr1	-,+	OR6N1,OR6K6	11145,57
chrX:135739320-135740235	chrX	+	135739441	135740128	True	NM_004840,NM_000074	chrX,chrX	-,+	ARHGEF6,CD40LG	123430,-9163
chr8:94778505-94780184	chr8	+	94778939	94779956	True	NM_203390,NR_024522	chr8,chr8	-,+	RBM12B,TMEM67	-25715,-11918
chr18:24443613-24444194	chr18	+	24443692	24444230	True	NM_004028,NR_026908,NM_001650	chr18,chr18,chr18	-,+,-	AQP4,C18orf16,AQP4	-1117,1041,1536
chr20:47534710-47536401	chr20	+	47535053	47536373	True	NM_006420,NM_020820	chr20,chr20	+,-	ARFGEF2,PREX1	1901,-90633
chr21:39870625-39871128	chr21	+	39870673	39871155	True	NM_182918,NM_170737,NM_001136155	chr21,chr21,chr21	-,+,-	ERG,KCNJ15,ERG	-245,-226295,-245
chr7:154797737-154798137	chr7	+	154797842	154797944	True	NR_028090,NM_007349	chr7,chr7	+,-	LOC202781,PAXIP1	-2756,-3160
chr8:17107046-17107544	chr8	+	17107045	17107569	True	NM_152415,NM_013354,NM_001145152,NM_054026	chr8,chr8,chr8,chr8	+,-,+,-	VPS37A,CNOT7,VPS37A,CNOT7	-2699,-2658,-2699,-2658
chr16:75181334-75182303	chr16	+	75181500	75182284	True	NM_194436,NM_153688	chr16,chr16	-,+	LDHD,ZFP1	-30830,136
chr17:73178150-73178593	chr17	+	73178149	73178221	True	NM_001005849,NM_024844,NM_006937	chr17,chr17,chr17	-,+,-	SUMO2,NUP85,SUMO2	927,23375,927
chrX:131351968-131352174	chrX	+	131351972	131352210	True	NM_021183,NM_001042452	chrX,chrX	-,+	RAP2C,MST4	29,-194387
chr12:123464218-123464439	chr12	+	123464243	123464475	True	NM_203444,NM_024623,NM_018694,NM_001002251,NM_001002252,NM_016638	chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,+,+,+	ABCB9,OGFOD2,ARL6IP4,ARL6IP4,ARL6IP4,ARL6IP4	-4491,-4940,404,404,404,404
chr11:68450277-68450891	chr11	+	68450285	68450783	True	NM_015973,NM_004923	chr11,chr11	+,-	GAL,MTL5	1199,68255
chr17:43046990-43047403	chr17	+	43046996	43047422	True	NM_213607,NM_006688	chr17,chr17	+,-	CCDC103,C1QL1	-69893,-1352
chr1:33367817-33368497	chr1	+	33367875	33368463	True	NM_033504,NM_002143	chr1,chr1	-,+	TMEM54,HPCA	-922,-15829
chr2:74601169-74601649	chr2	+	74601232	74601648	True	NM_001135040,NM_001135041,NM_023019,NM_001190837,NR_024463,NM_004082	chr2,chr2,chr2,chr2,chr2,chr2	-,-,-,-,+,-	DCTN1,DCTN1,DCTN1,DCTN1,LOC100189589,DCTN1	5884,264,264,5884,11196,5884
chr8:37730978-37731223	chr8	+	37731133	37731268	True	NM_018310,NM_032777	chr8,chr8	-,+	BRF2,GPR124	-23702,-76793
chr2:232064570-232064991	chr2	+	232064726	232064984	True	NM_025139,NM_000867	chr2,chr2	+,-	ARMC9,HTR2B	-1443,-74902
chr3:183273756-183275135	chr3	+	183273849	183275013	True	NM_130446,NM_017644	chr3,chr3	-,+	KLHL6,KLHL24	-350,78397
chr7:38651402-38651835	chr7	+	38651401	38651629	True	NM_001635,NM_001166018	chr7,chr7	-,+	AMPH,POU6F2	19588,365979
chr2:85890814-85892631	chr2	+	85890847	85892451	True	NM_000542,NM_198843,NM_006433	chr2,chr2,chr2	-,-,+	SFTPB,SFTPB,GNLY	3463,3463,28962
chr12:29645824-29646502	chr12	+	29645920	29646535	True	NM_018099,NM_183378	chr12,chr12	+,-	FAR2,OVCH1	-269385,4143
chr9:65493898-65495288	chr9	+	65494979	65495056	True	NR_026802,NR_024496,NR_027461	chr9,chr9,chr9	-,+,-	FAM74A4,LOC442421,FAM74A2	-593,999212,-593
chr9:65493898-65495288	chr9	+	41312724	41312801	False	NM_001113541,NM_015667	chr9,chr9	-,+	FAM75A5,FAM75A7	14618,187877
chr9:65493898-65495288	chr9	-	41515237	41515314	False	NM_001113541,NR_027861	chr9,chr9	+,-	FAM75A5,ZNF658B	-14614,76944
chr9:65493898-65495288	chr9	-	39370245	39370322	False	NR_027861,NM_001040065	chr9,chr9	-,+	ZNF658B,FAM75A2	76917,-14602
chr9:65493898-65495288	chr9	-	39899529	39899606	False	NR_026803,NR_003528	chr9,chr9	+,-	FAM74A1,LOC653501	593,-435003
chr5:41172890-41173335	chr5	+	41172907	41173367	True	NM_000587,NM_000065	chr5,chr5	+,-	C7,C6	-263359,40350
chr15:25305785-25306591	chr15	+	25305861	25306629	True	NR_003322,NR_003317,NR_003320,NR_003321,NR_003324,NR_003316,NR_003323,NR_003319,NR_003318,NM_130838	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,-	SNORD116-7,SNORD116-2,SNORD116-5,SNORD116-6,SNORD116-9,SNORD116-1,SNORD116-8,SNORD116-4,SNORD116-3,UBE3A	849,3542,849,3542,-3906,-9289,8948,-1228,-3906,344074
chr5:79950932-79951971	chr5	+	79950940	79951994	True	NM_001190470,NM_002439,NM_000791	chr5,chr5,chr5	-,+,-	MTRNR2L2,MSH3,DHFR	-4086,-697,-140
chr1:109130594-109132042	chr1	+	109130912	109132089	True	NM_001010883,NM_001102592	chr1,chr1	+,-	FAM102B,HENMT1	-27992,71712
chr7:2282069-2283645	chr7	+	2282136	2283464	True	NM_003550,NM_198954,NM_002452,NM_198952,NM_198950,NM_013393,NM_001013836,NM_001013837,NM_198948,NM_198949,NM_198953	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,+,-,-,-,+,+,+	MAD1L1,NUDT1,NUDT1,NUDT1,NUDT1,FTSJ2,MAD1L1,MAD1L1,NUDT1,NUDT1,NUDT1	-9553,-57,-330,-291,-291,-303,-9553,-9553,-330,-330,-57
chr13:99174350-99174565	chr13	+	99174352	99174532	True	NM_003576,NR_036129	chr13,chr13	-,+	STK24,MIR3170	-11,-313625
chr11:6637729-6637968	chr11	+	6637795	6637967	True	NM_001014795,NM_000391,NM_006284	chr11,chr11,chr11	+,-,-	ILK,TPP1,TAF10	-12639,2775,-4350
chr13:115079245-115079681	chr13	+	115079299	115079590	True	NM_001164145,NM_001164144,NM_007368	chr13,chr13,chr13	+,+,-	ZNF828,ZNF828,RASA3	374,374,-181204
chr14:54960093-54961663	chr14	+	54960339	54961709	True	NM_004124,NM_006568	chr14,chr14	-,+	GMFB,CGRRF1	-4595,14877
chr18:74963805-74964068	chr18	+	74963848	74964098	True	NM_001480,NM_001025100	chr18,chr18	+,-	GALR1,MBP	-1892,-119074
chr16:54965400-54965644	chr16	+	54965479	54965661	True	NM_005853,NR_034105,NR_034106	chr16,chr16,chr16	+,-,-	IRX5,CRNDE,CRNDE	-419,-2400,-2789
chr11:60522999-60524528	chr11	+	60523035	60524523	True	NM_152717,NM_001098835,NM_004778	chr11,chr11,chr11	+,+,-	MS4A15,MS4A15,GPR44	-184,-184,98971
chr12:5540314-5540655	chr12	+	5540348	5540654	True	NM_020373,NM_001102654	chr12,chr12	-,+	ANO2,NTF3	514794,625
chr5:160225609-160225848	chr5	+	160225610	160225712	True	NR_029701,NM_025153	chr5,chr5	+,-	MIR146A,ATP10B	-313306,53557
chr17:46668568-46669473	chr17	+	46668699	46669468	True	NR_033204,NR_033205,NR_033202,NR_033203,NR_033201,NM_002147	chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,-	LOC404266,LOC404266,LOC404266,LOC404266,LOC404266,HOXB5	213,3851,-908,185,-927,1685
chr5:6584850-6585444	chr5	+	6584855	6585493	True	NR_024424,NR_024423,NM_001193455	chr5,chr5,chr5	+,+,-	LOC255167,LOC255167,NSUN2	-1496,-2619,48030
chr9:115653116-115653329	chr9	+	115653154	115653280	True	NM_001012994,NM_033051	chr9,chr9	+,-	SNX30,SLC46A2	-140071,15
chr16:84651572-84651829	chr16	+	84651797	84651857	True	NM_024731,NM_021149	chr16,chr16	+,-	KLHL36,COTL1	30273,-128
chr16:74456071-74457126	chr16	+	74456139	74457167	True	NM_001011880,NM_002811	chr16,chr16	-,+	CLEC18B,PSMD7	-771,-125517
chr16:74456071-74457126	chr16	-	69983291	69984253	False	NM_001136214,NR_003610,NM_182619	chr16,chr16,chr16	+,-,+	CLEC18A,PDXDC2P,CLEC18A	372,115648,556
chr16:74456071-74457126	chr16	-	70206203	70207165	False	NR_033959,NM_173619	chr16,chr16	-,+	LOC729513,CLEC18C	52821,762
chr14:21496270-21496501	chr14	+	21496282	21496487	True	NM_001012264,NM_201536,NM_201537,NM_201535,NM_173846,NM_201541,NM_016250,NM_201540,NM_201538,NM_201539	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	-,-,-,-,+,-,-,-,-,-	RNASE13,NDRG2,NDRG2,NDRG2,TPPP2,NDRG2,NDRG2,NDRG2,NDRG2,NDRG2	6507,-2347,-2347,-2347,1857,-3018,-2347,-3018,-3018,-3018
chr19:4769704-4770073	chr19	+	4769709	4769904	True	NR_029607,NR_027148,NM_139159	chr19,chr19,chr19	+,+,-	MIR7-3,C19orf30,DPP9	777,-643,-45854
chr3:51743488-51744096	chr3	+	51743533	51743961	True	NM_001143833,NM_001130063,NM_000839	chr3,chr3,chr3	-,+,+	IQCF6,GRM2,GRM2	69300,-2504,-2504
chr11:64889861-64890350	chr11	+	64889992	64890070	True	NR_037567,NM_001997,NM_004927,NM_014205,NR_037568	chr11,chr11,chr11,chr11,chr11	+,-,+,-,+	MRPL49,FAU,MRPL49,ZNHIT2,MRPL49	-388,-320,-327,-4822,-327
chr11:558877-560381	chr11	+	559134	560398	True	NR_029623,NM_173573,NM_001143994,NM_001143993,NM_003475	chr11,chr11,chr11,chr11,chr11	-,-,+,+,+	MIR210,C11orf35,RASSF7,RASSF7,RASSF7	7850,431,1051,572,1051
chrX:40036372-40038319	chrX	+	40036635	40038354	True	NM_001123384,NM_005765,NM_001123383	chrX,chrX,chrX	-,+,-	BCOR,ATP6AP2,BCOR	-53,401861,-53
chr19:57992923-57994155	chr19	+	57993115	57993777	True	NM_024691,NM_001098493,NM_001098491,NM_001144068,NM_001098492,NM_001098495,NM_001098494,NM_001098496,NM_001024596	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,-,+,+,+,+,-	ZNF419,ZNF419,ZNF419,ZNF772,ZNF419,ZNF419,ZNF419,ZNF419,ZNF772	5301,5301,5301,-4177,5301,5301,5301,5301,-4177
chr1:6580182-6581887	chr1	+	6580314	6581911	True	NM_198681,NM_138697	chr1,chr1	-,+	PLEKHG5,TAS1R1	-245,33426
chr16:6836888-6837943	chr16	+	6836921	6837724	True	NM_201598,NM_001142334	chr16,chr16	-,+	FAM86A,RBFOX1	-1689132,-13162
chr12:47474478-47474737	chr12	+	47474659	47474785	True	NM_181847,NM_138371,NM_001143668	chr12,chr12,chr12	-,+,-	AMIGO2,FAM113B,AMIGO2	-925,135266,-925
chr18:24449431-24450307	chr18	+	24449431	24450347	True	NM_004028,NR_026908,NM_001650	chr18,chr18,chr18	-,+,-	AQP4,C18orf16,AQP4	-6856,-4211,-3715
chr12:120972747-120973749	chr12	+	120972913	120973767	True	NM_014868,NM_032314	chr12,chr12	+,-	RNF10,COQ5	-839,-5949
chr13:114058017-114059105	chr13	+	114058095	114058985	True	NM_024719,NM_017905	chr13,chr13	-,+	GRTP1,TMCO3	-39632,86322
chr15:90059408-90059913	chr15	+	90059519	90059841	True	NR_027074,NR_027075,NR_027076,NR_027077,NM_152259	chr15,chr15,chr15,chr15,chr15	-,-,-,-,+	LOC283761,LOC283761,LOC283761,LOC283761,C15orf42	7482,7482,7482,7482,58976
chr11:17501286-17502373	chr11	+	17501497	17502288	True	NM_000352,NM_001202439	chr11,chr11	-,+	ABCC8,DKFZp686O24166	-3048,-128239
chr10:88726642-88727103	chr10	+	88726721	88727047	True	NM_003087,NM_024756,NM_133447,NM_006829	chr10,chr10,chr10,chr10	+,-,+,+	SNCG,MMRN2,AGAP11,C10orf116	-8484,-9296,3450,1140
chr6:131954885-131956032	chr6	+	131955054	131955576	True	NM_015979,NM_004830,NM_005021	chr6,chr6,chr6	-,-,+	MED23,MED23,ENPP3	-5691,-5691,2865
chr19:36209794-36210153	chr19	+	36209865	36210069	True	NM_014727,NM_024660,NM_014383	chr19,chr19,chr19	+,-,+	MLL4,IGFLR1,ZBTB32	-995,23332,-6086
chr17:72919867-72920166	chr17	+	72919987	72920063	True	NM_173477,NM_178160	chr17,chr17	-,+	USH1G,OTOP2	-636,306
chr18:74471826-74472416	chr18	+	74471837	74472010	True	NM_007345,NM_001025081	chr18,chr18	+,-	ZNF236,MBP	64105,257095
chr17:46683641-46685243	chr17	+	46683749	46685151	True	NM_004502,NM_024016,NM_018952,NR_033205	chr17,chr17,chr17,chr17	-,-,-,+	HOXB7,HOXB8,HOXB6,LOC404266	3282,7200,-1415,-10480
chr16:67757597-67758203	chr16	+	67757679	67758229	True	NR_027399,NR_027398,NM_030819,NM_001012984	chr16,chr16,chr16,chr16	-,-,-,+	GFOD2,GFOD2,GFOD2,C16orf86	-4406,-4406,-4406,-57013
chr7:35724413-35725233	chr7	+	35724512	35724579	True	NM_022373,NM_001011553	chr7,chr7	-,+	HERPUD2,SEPT7	10248,116047
chr19:41036823-41037292	chr19	+	41036894	41037246	True	NM_025213,NM_000713	chr19,chr19	+,-	SPTBN4,BLVRB	-550,-65169
chr11:66057890-66059114	chr11	+	66058012	66059155	True	NM_020470,NM_153266	chr11,chr11	-,+	YIF1A,TMEM151A	-1374,217
chr4:103740341-103740980	chr4	+	103740595	103740966	True	NM_001008388,NM_003340,NM_181887,NM_181891,NM_181892,NM_181889,NM_181888,NM_181886	chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4	+,-,-,-,-,-,-,-	CISD2,UBE2D3,UBE2D3,UBE2D3,UBE2D3,UBE2D3,UBE2D3,UBE2D3	49168,8202,7805,7805,7437,8404,8202,8202
chr1:112179607-112181104	chr1	+	112179636	112180907	True	NM_002884,NR_034126	chr1,chr1	+,-	RAP1A,LOC100129269	-17282,-28696
chrX:134864648-134865492	chrX	+	134864814	134865404	True	NM_152582,NM_001017436	chrX,chrX	+,+	CT45A2,CT45A4	809,809
chrX:134864648-134865492	chrX	-	134937544	134938134	False	NM_018666,NM_001017436	chrX,chrX	+,-	SAGE1,CT45A4	37650,-809
chrX:134864648-134865492	chrX	-	134954799	134955389	False	NM_001007551,NM_018666,NM_001172288	chrX,chrX,chrX	-,+,-	CT45A5,SAGE1,CT45A5	-805,20395,-805
chrX:134864648-134865492	chrX	+	134845818	134845874	False	NM_001017417,NM_001017436	chrX,chrX	+,-	CT45A1,CT45A4	1310,90917
chrX:134864648-134865492	chrX	+	134882089	134882679	False	NM_001017436,NM_001017435	chrX,chrX	-,+	CT45A4,CT45A3	54111,808
chr3:102148938-102150472	chr3	+	102149037	102150484	True	NM_000986,NM_175056	chr3,chr3	-,+	RPL24,ZPLD1	-743474,3374
chr12:69863261-69863872	chr12	+	69863303	69863870	True	NM_006654,NM_001042555,NR_037475	chr12,chr12,chr12	+,+,-	FRS2,FRS2,MIR3913-1	258,258,114783
chr1:27708699-27709002	chr1	+	27708705	27709035	True	NM_207397,NM_005281,NM_003665,NM_173452	chr1,chr1,chr1,chr1	-,+,-,-	CD164L2,GPR3,FCN3,FCN3	820,10116,-7390,-7390
chr7:98971153-98971529	chr7	+	98971194	98971578	True	NM_005720,NM_014891	chr7,chr7	+,-	ARPC1B,PDAP1	719,34777
chr11:7697675-7698855	chr11	+	7697793	7698880	True	NM_003621,NM_016229	chr11,chr11	+,-	PPFIBP2,CYB5R2	-162843,-2972
chr1:150522272-150522478	chr1	+	150522344	150522518	True	NM_019032,NM_001197320,NM_025008,NR_036211	chr1,chr1,chr1,chr1	+,-,+,+	ADAMTSL4,MCL1,ADAMTSL4,MIR4257	-497,29746,-497,1886
chr16:77826699-77827418	chr16	+	77826766	77827419	True	NM_020927,NM_199355	chr16,chr16	+,-	VAT1L,ADAMTS18	-4346,-357755
chr19:10565556-10565858	chr19	+	10565556	10565862	True	NM_006202,NM_012289	chr19,chr19	+,-	PDE4A,KEAP1	-1974,47669
chr12:21668562-21669324	chr12	+	21668733	21669369	True	NM_030572,NM_032941	chr12,chr12	+,-	C12orf39,RECQL	9886,-14130
chr2:88374245-88374564	chr2	+	88374345	88374618	True	NM_016618,NM_198274	chr2,chr2	-,+	KRCC1,SMYD1	-19097,-7098
chr12:57471868-57472276	chr12	+	57471872	57472308	True	NM_001130963,NM_005967,NM_015257	chr12,chr12,chr12	-,+,-	TMEM194A,NAB2,TMEM194A	316,10368,316
chr4:139482333-139482821	chr4	+	139482344	139482782	True	NM_012118,NM_014331	chr4,chr4	+,-	CCRN4L,SLC7A11	454160,-318841
chr22:39410640-39411392	chr22	+	39410728	39410988	True	NM_014508,NM_175709,NM_152426	chr22,chr22,chr22	+,-,+	APOBEC3C,CBX7,APOBEC3D	-526,137600,6129
chr11:65487048-65487482	chr11	+	65487048	65487464	True	NM_182709,NM_006388,NM_182710,NM_032193	chr11,chr11,chr11,chr11	+,+,+,-	KAT5,KAT5,KAT5,RNASEH2C	-7610,-7610,-7610,995
chr1:228647301-228647784	chr1	+	228647401	228647661	True	NM_033445,NM_175055	chr1,chr1	-,+	HIST3H2A,HIST3H2BB	-1841,-1644
chr19:48392087-48392704	chr19	+	48392126	48392506	True	NM_003167,NR_004437	chr19,chr19	-,+	SULT2A1,SNAR-A12	-2472,18428
chr8:144330364-144330801	chr8	+	144330369	144330781	True	NM_173832,NM_052963	chr8,chr8	+,-	ZFP41,TOP1MT	-1311,86319
chr1:55465280-55466292	chr1	+	55465281	55466067	True	NM_057176,NM_014762	chr1,chr1	+,-	BSND,DHCR24	-715,-112360
chrX:80526006-80527618	chrX	+	80526409	80527413	True	NM_003022,NM_030763	chrX,chrX	+,-	SH3BGRL,HMGN5	-69157,-68968
chr4:155665639-155666329	chr4	+	155665650	155665994	True	NM_004744,NM_021870	chr4,chr4	+,-	LRAT,FGG	-538,-131748
chr2:48793580-48794709	chr2	+	48793866	48794401	True	NM_000233,NM_172311	chr2,chr2	-,+	LHCGR,STON1-GTF2A1L	188543,1757
chr11:59628789-59629612	chr11	+	59628961	59629626	True	NM_001062,NM_004177	chr11,chr11	-,+	TCN1,STX3	4465,-106480
chr22:50493090-50493411	chr22	+	50493141	50493221	True	NM_139202,NM_001164104	chr22,chr22	-,+	MLC1,MOV10L1	30610,35213
chr20:30778492-30779517	chr20	+	30778596	30779495	True	NR_002781,NM_172236	chr20,chr20	-,+	TSPY26P,POFUT1	-433,16200
chr5:77575452-77576978	chr5	+	77576227	77576860	True	NM_003664,NM_004866	chr5,chr5	-,+	AP3B1,SCAMP1	13719,79478
chr10:35374591-35374890	chr10	+	35374642	35374874	True	NM_001198777,NM_003591,NM_001881	chr10,chr10,chr10	-,-,+	CUL2,CUL2,CREM	4746,4487,40926
chr17:39595068-39595387	chr17	+	39595129	39595385	True	NM_030975,NM_006771	chr17,chr17	+,-	KRTAP9-9,KRT38	-183544,2261
chr3:130293267-130294077	chr3	+	130293294	130293798	True	NM_001102608,NM_014602	chr3,chr3	+,-	COL6A6,PIK3R4	-14174,171948
chr14:57733751-57735018	chr14	+	57733824	57735058	True	NM_006544,NM_018229,NR_026895	chr14,chr14,chr14	-,+,+	EXOC5,MUDENG,MUDENG	609,547,547
chr4:148539084-148539423	chr4	+	148539088	148539420	True	NM_018241,NM_138364	chr4,chr4	+,-	TMEM184C,PRMT10	-600,65910
chr9:5733556-5734265	chr9	+	5733626	5733981	True	NM_024896,NM_020829	chr9,chr9	-,+	ERMP1,KIAA1432	99158,-77105
chrX:82763229-82763579	chrX	+	82763265	82763625	True	NM_014496,NM_000307	chrX,chrX	-,+	RPS6KA6,POU3F4	679368,-47
chr17:41020437-41020766	chr17	+	41020535	41020733	True	NR_002773,NR_027254	chr17,chr17	+,-	AOC4,LOC388387	-1424,30068
chr20:62150265-62150512	chr20	+	62150268	62150492	True	NM_024299,NM_005975	chr20,chr20	+,-	PPDPF,PTK6	1640,18265
chrX:2994669-2995009	chrX	+	2994736	2994801	True	NM_000047,NM_004042	chrX,chrX	-,+	ARSE,ARSF	-112242,-9947
chr16:2271088-2271316	chr16	+	2271171	2271357	True	NM_004424,NM_001042371	chr16,chr16	+,-	E4F1,PGP	2209,-6349
chr1:15801941-15803444	chr1	+	15802389	15803154	True	NM_015849,NM_001229	chr1,chr1	+,-	CELA2B,CASP9	23,47836
chr2:88048244-88049302	chr2	+	88048278	88049224	True	NM_001032392,NM_001078170,NM_002665	chr2,chr2,chr2	+,-,+	PLGLB1,RGPD2,PLGLB2	-720,76112,-724
chr2:88048244-88049302	chr2	+	106999327	106999380	False	NR_003506,NM_001144013	chr2,chr2	+,-	PLGLA,RGPD3	3388,85474
chr2:88048244-88049302	chr2	-	87247352	87248300	False	NM_001032392,NM_002665,NM_001024457	chr2,chr2,chr2	-,-,+	PLGLB1,PLGLB2,RGPD1	720,724,-102665
chr9:125422148-125423064	chr9	+	125422278	125423017	True	NM_001004450,NM_001005236	chr9,chr9	-,+	OR1B1,OR1L1	-30464,977
chr6:26251667-26252035	chr6	+	26251667	26252009	True	NM_003547,NM_003524,NM_021018	chr6,chr6,chr6	-,+,-	HIST1H4G,HIST1H2BH,HIST1H3F	-4462,-25,-832
chr18:29177552-29178452	chr18	+	29177728	29178478	True	NM_004775,NM_000371	chr18,chr18	-,+	B4GALT6,TTR	86259,-6051
chr3:178863192-178864435	chr3	+	178863478	178863980	True	NM_152240,NM_006218	chr3,chr3	-,+	ZMAT3,PIK3CA	-73822,2330
chr1:172411669-172412745	chr1	+	172411715	172412573	True	NM_153747,NM_002642,NM_139240	chr1,chr1,chr1	-,-,+	PIGC,PIGC,C1orf105	717,717,-21938
chr11:4899513-4900185	chr11	+	4899512	4900159	True	NM_001004759,NM_001004758	chr11,chr11	+,-	OR51T1,OR51S1	2889,-29074
chr11:57185261-57186285	chr11	+	57185271	57185905	True	NM_199329,NM_014096,NM_178570,NM_017611	chr11,chr11,chr11,chr11	-,-,+,-	SLC43A3,SLC43A3,RTN4RL2,SLC43A3	8739,8668,42433,9198
chr15:30115253-30115693	chr15	+	30115315	30115567	True	NM_003257,NR_026859,NM_175610	chr15,chr15,chr15	-,+,-	TJP1,FAM7A3,TJP1	-609,280367,-609
chr2:27666105-27666461	chr2	+	27666132	27666456	True	NM_177983,NM_173853,NM_001168364	chr2,chr2,chr2	-,+,+	PPM1G,KRTCAP3,KRTCAP3	-33636,-951,-951
chrX:125686934-125688006	chrX	+	125687026	125687784	True	NM_001122716,NM_178470	chrX,chrX	+,-	CXorf64,DCAF12L1	265962,-184
chr12:56498194-56498668	chr12	+	56498262	56498562	True	NM_001130420,NM_006191	chr12,chr12	-,+	SMARCC2,PA2G4	84839,-210
chr4:148402496-148404057	chr4	+	148402761	148403927	True	NM_138364,NR_028596,NM_001957,NM_001166055	chr4,chr4,chr4,chr4	-,+,+,+	PRMT10,EDNRA,EDNRA,EDNRA	201403,-743,-743,-743
chr1:159831345-159832123	chr1	+	159831475	159831989	True	NM_020125,NM_001013661,NM_001134233	chr1,chr1,chr1	+,-,-	SLAMF8,VSIG8,C1orf204	-35047,508,-6338
chr12:58160352-58160719	chr12	+	58160376	58160756	True	NM_000785,NM_023033,NM_005371,NM_015433,NM_206914	chr12,chr12,chr12,chr12,chr12	-,-,-,+,+	CYP27B1,METTL1,METTL1,METTL21B,METTL21B	270,5208,5208,5626,5626
chr1:155827466-155828643	chr1	+	155827542	155828374	True	NM_001037533,NM_032292,NM_152280	chr1,chr1,chr1	-,-,+	GON4L,GON4L,SYT11	-570,-570,885
chr8:144727220-144727960	chr8	+	144727610	144727888	True	NM_014789,NM_001082480,NM_003313	chr8,chr8,chr8	+,+,-	ZNF623,ZNF623,TSTA3	4065,-9288,-27878
chr4:90832008-90833033	chr4	+	90832020	90833091	True	NM_001146055,NM_007351	chr4,chr4	-,+	SNCA,MMRN1	-72573,-16019
chr13:19525243-19525684	chr13	+	19525324	19525676	True	NR_027995,NR_026852	chr13,chr13	-,+	LOC284232,LOC348021	-79215,56722
chr12:2025727-2025959	chr12	+	2025769	2025983	True	NM_001163926,NM_172364	chr12,chr12	+,-	LRTM2,CACNA2D4	-96387,1937
chr20:35978465-35979498	chr20	+	35978629	35979403	True	NM_198291,NM_021081,NM_005417	chr20,chr20,chr20	+,-,+	SRC,GHRH,SRC	-4123,-93330,-5592
chr2:105473139-105473367	chr2	+	105473171	105473407	True	NM_006236,NR_037883	chr2,chr2	+,-	POU3F3,LOC100506421	-1253,-5237
chr19:37064338-37064562	chr19	+	37064396	37064474	True	NM_020951,NM_032825	chr19,chr19	-,+	ZNF529,ZNF382	-199,31746
chr11:9285363-9285909	chr11	+	9285456	9285872	True	NM_006391,NM_015213	chr11,chr11	+,-	IPO7,DENND5A	120296,1049
chrX:47421738-47422410	chrX	+	47421913	47422457	True	NM_001654,NM_006950	chrX,chrX	+,-	ARAF,SYN1	-1448,56849
chr10:1781651-1782181	chr10	+	1781651	1782019	True	NR_033387,NM_018702	chr10,chr10	+,-	NCRNA00168,ADARB2	-212877,-1933
chr20:30407143-30408008	chr20	+	30407295	30407961	True	NM_004118,NM_033118	chr20,chr20	-,+	FOXS1,MYLK2	25509,-168
chr19:55669240-55670286	chr19	+	55669877	55670290	True	NM_001126132,NM_001126133,NM_017729,NM_178837,NM_000363,NM_003283	chr19,chr19,chr19,chr19,chr19,chr19	-,-,+,-,-,-	TNNT1,TNNT1,EPS8L1,C19orf51,TNNI3,TNNT1	-9271,-9271,-78168,7785,-777,-9271
chr19:48897359-48897796	chr19	+	48897493	48897693	True	NM_000836,NM_006801	chr19,chr19	+,-	GRIN2D,KDELR1	438,-2683
chr17:47309028-47309673	chr17	+	47309314	47309454	True	NM_001143804,NM_178500,NR_034161	chr17,chr17,chr17	-,-,+	PHOSPHO1,PHOSPHO1,FLJ40194	-1186,-1186,16150
chr20:53092931-53093150	chr20	+	53092937	53093155	True	NM_018431,NM_001128915	chr20,chr20	+,-	DOK5,CYP24A1	-722,-302421
chr13:22170856-22171786	chr13	+	22170861	22171703	True	NM_152726,NM_002010	chr13,chr13	-,+	EFHA1,FGF9	6715,73511
chr9:79375969-79376475	chr9	+	79376021	79376479	True	NR_015342,NM_015225	chr9,chr9	+,-	PCA3,PRUNE2	2874,144581
chr3:11621291-11621865	chr3	+	11621291	11621807	True	NM_006395,NM_001128220	chr3,chr3	+,-	ATG7,VGLL4	-307332,2079
chr1:38157665-38157922	chr1	+	38157675	38157961	True	NM_017850,NM_018101	chr1,chr1	-,+	C1orf109,CDCA8	-1483,197
chr8:104589680-104591074	chr8	+	104589997	104590488	True	NM_001100117,NM_030780	chr8,chr8	+,-	RIMS2,SLC25A32	-77081,-162529
chr9:117669481-117670247	chr9	+	117669510	117670132	True	NM_017418,NM_001244	chr9,chr9	+,-	DEC1,TNFSF8	233964,22696
chr2:176958261-176958960	chr2	+	176958511	176958976	True	NM_001080458,NM_021193,NM_000523	chr2,chr2,chr2	-,+,+	EVX2,HOXD12,HOXD13	-9821,5553,-1030
chr5:33944525-33944840	chr5	+	33944627	33944859	True	NM_016568,NM_016180	chr5,chr5	+,-	RXFP3,SLC45A2	-8187,39971
chr1:54354125-54354847	chr1	+	54354130	54354769	True	NM_018982,NM_213593,NR_036640,NM_000792,NR_036639,NM_001039716,NM_001039715	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,+,-,+,-,+,+	YIPF1,DIO1,YIPF1,DIO1,YIPF1,DIO1,DIO1	773,5091,773,5091,773,5091,5091
chr8:144797965-144798352	chr8	+	144798086	144798307	True	NM_001162914,NM_139021	chr8,chr8	-,+	LOC100130274,MAPK15	-7807,199
chr5:891449-891728	chr5	+	891589	891771	True	NR_027633,NM_001009877,NM_004237,NM_001166260,NM_023924	chr5,chr5,chr5,chr5,chr5	-,-,+,+,-	BRD9,BRD9,TRIP13,TRIP13,BRD9	1218,953,1197,1197,1218
chr9:139643712-139643972	chr9	+	139643742	139643828	True	NM_178469,NR_033913,NM_198946,NM_001001712	chr9,chr9,chr9,chr9	-,+,-,-	LCN8,LOC100128593,LCN6,LCN10	8953,-3180,-762,-6331
chr1:11751048-11751277	chr1	+	11751215	11751277	True	NM_198545,NM_001127325,NM_006341	chr1,chr1,chr1	+,-,-	C1orf187,MAD2L2,MAD2L2	503,451,-9944
chr3:184452053-184452887	chr3	+	184452091	184452653	True	NM_001009921,NM_022149	chr3,chr3	+,-	VPS8,MAGEF1	77277,-22255
chr18:74962690-74963177	chr18	+	74962715	74963139	True	NM_001480,NM_001025100	chr18,chr18	+,-	GALR1,MBP	-758,-117941
chr9:131448229-131448469	chr9	+	131448346	131448518	True	NM_052844,NM_001122821,NM_003011	chr9,chr9,chr9	-,+,+	WDR34,SET,SET	-29217,-2463,2990
chr7:94023823-94024097	chr7	+	94023853	94024027	True	NM_001099400,NM_000089	chr7,chr7	-,+	SGCE,COL1A2	261544,-31
chr19:16127603-16128053	chr19	+	16127702	16128100	True	NR_026828,NM_021187	chr19,chr19	+,-	LOC126536,CYP4F11	-1309,-82026
chr22:20398962-20399318	chr22	+	20398967	20399181	True	NR_003563,NR_026919	chr22,chr22	-,+	PI4KAP1,LOC150197	-272,-205163
chr22:20398962-20399318	chr22	+	21089114	21089186	False	NM_002650,NR_026815	chr22,chr22	-,+	PI4KA,TMEM191A	-159,-33763
chr22:20398962-20399318	chr22	+	21842943	21843157	False	NM_015094,NR_003700	chr22,chr22	+,-	HIC2,PI4KAP2	-71301,28673
chr3:42941694-42942683	chr3	+	42941890	42942706	True	NM_207404,NM_004391,NM_001134656	chr3,chr3,chr3	+,-,+	ZNF662,CYP8B1,ZNF662	4695,-24257,4951
chr2:219127407-219127683	chr2	+	219127507	219127681	True	NM_015488,NM_001077191,NM_001087,NM_170699,NM_001077194,NM_001077399	chr2,chr2,chr2,chr2,chr2,chr2	+,+,-,+,+,+	PNKD,GPBAR1,AAMP,GPBAR1,GPBAR1,PNKD	7433,-1820,7262,-1820,-1820,7433
chr6:37224793-37225071	chr6	+	37224794	37225080	True	NM_145316,NM_017772,NM_001162900	chr6,chr6,chr6	-,+,-	TMEM217,TBC1D22B,TMEM217	383,467,901
chr8:145013930-145014478	chr8	+	145013992	145014490	True	NM_000837,NR_030383,NM_201384,NM_201381,NM_201383,NM_201382	chr8,chr8,chr8,chr8,chr8,chr8	+,-,-,-,-,-	GRINA,MIR661,PLEC,PLEC,PLEC,PLEC	49735,5007,-234,4465,2252,3670
chr8:37799137-37800190	chr8	+	37799151	37800217	True	NM_004095,NM_152413	chr8,chr8	+,-	EIF4EBP1,GOT1L1	87802,-1504
chr10:18686986-18687504	chr10	+	18686986	18687247	True	NM_201570,NM_182543	chr10,chr10	+,-	CACNB2,NSUN6	2265,253354
chr5:178050744-178051203	chr5	+	178050752	178051170	True	NM_020666,NM_058230	chr5,chr5	-,+	CLK4,ZNF354B	2949,235783
chr17:10103204-10103489	chr17	+	10103373	10103537	True	NM_201433,NM_004246	chr17,chr17	-,+	GAS7,GLP2R	-1505,-374044
chr7:138823715-138825443	chr7	+	138824015	138825103	True	NM_001144923,NM_024926,NM_001144920,NM_024625	chr7,chr7,chr7,chr7	+,+,+,-	TTC26,TTC26,TTC26,ZC3HAV1	-5583,-5583,-5583,-29550
chr10:43956748-43957062	chr10	+	43957051	43957114	True	NR_026693,NM_001098204	chr10,chr10	+,-	ZNF487P,HNRNPF	-24528,-52355
chr5:68618990-68619483	chr5	+	68619252	68619478	True	NM_176816,NM_133343	chr5,chr5	-,+	CCDC125,RAD17	-2842,45645
chr2:135209615-135211175	chr2	+	135209623	135211158	True	NM_030923,NR_024275	chr2,chr2	-,+	TMEM163,LOC151162	265464,-2714
chr14:45430718-45431128	chr14	+	45430791	45431157	True	NM_017658,NM_015091	chr14,chr14	-,+	KLHL28,FAM179B	72,258
chr12:40622666-40624591	chr12	+	40622772	40624606	True	NM_052885,NM_198578	chr12,chr12	-,+	SLC2A13,LRRK2	-123111,-4024
chr10:18628422-18629926	chr10	+	18628530	18629958	True	NM_182543,NM_201590	chr10,chr10	-,+	NSUN6,CACNB2	310642,81
chr17:20520408-20521825	chr17	+	20520535	20521576	True	NM_001190790,NR_029393	chr17,chr17	+,-	CDRT15L2,KRT16P3	-37549,-112724
chr17:20520408-20521825	chr17	+	15712880	15713790	False	NM_006470,NR_002211	chr17,chr17	-,+	TRIM16,MEIS3P1	-126687,-22767
chr11:72526162-72526842	chr11	+	72526207	72526729	True	NM_033388,NM_006645	chr11,chr11	+,-	ATG16L2,STARD10	-807,-21457
chr17:38215107-38216656	chr17	+	38215337	38216451	True	NM_014815,NM_001079518,NM_199334,NM_001190919,NM_001190918,NM_003250	chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,+,+,+	MED24,MED24,THRA,THRA,THRA,THRA	-4448,-4448,2616,1994,2616,2616
chrX:20284805-20285008	chrX	+	20284910	20285016	True	NM_001173456,NM_004586	chrX,chrX	+,-	PDHA1,RPS6KA3	-922950,-160
chr15:43941622-43942064	chr15	+	43941783	43942109	True	NM_054020,NM_172097,NM_172095,NM_001015001	chr15,chr15,chr15,chr15	-,-,-,+	CATSPER2,CATSPER2,CATSPER2,CKMT1A	-744,-744,-744,42974
chr20:3142682-3143095	chr20	+	3142711	3143117	True	NM_014731,NM_014948,NM_199415,NM_021826,NM_033453	chr20,chr20,chr20,chr20,chr20	-,-,-,-,+	ProSAPiP1,UBOX5,UBOX5,FASTKD5,ITPA	6140,-2171,-2171,-2179,46938
chr16:49878375-49879400	chr16	+	49878487	49879418	True	NM_153261,NM_015069	chr16,chr16	+,-	TMEM188,ZNF423	179770,-17569
chr5:131404347-131404930	chr5	+	131404397	131404963	True	NM_001205250,NM_000588,NM_000758	chr5,chr5,chr5	-,+,+	ACSL6,IL3,CSF2	-56636,-8101,4521
chr16:22527987-22528952	chr16	+	22528565	22528749	True	NM_001135865,NR_027460	chr16,chr16	+,-	LOC100132247,RRN3P3	-3772,-79529
chr16:22527987-22528952	chr16	-	21432800	21432984	False	NR_026675,NM_130464	chr16,chr16	+,-	NCRNA00169,NPIPL3	-120681,3724
chr16:22527987-22528952	chr16	-	21865078	21865262	False	NM_003366,NR_003370	chr16,chr16	+,-	UQCRC2,RRN3P1	99346,-34583
chr16:22527987-22528952	chr16	-	29513305	29513489	False	NR_002557,NM_177552	chr16,chr16	-,+	LOC613038,SULT1A3	-34406,-42149
chr16:22527987-22528952	chr16	-	30253274	30253458	False	NR_002555,NM_177552	chr16,chr16	-,+	LOC613037,SULT1A3	3524,-42776
chr6:26413985-26414481	chr6	+	26414080	26414479	True	NR_027795,NM_003543	chr6,chr6	+,-	BTN2A3,HIST1H4H	7139,-128353
chr16:15949715-15950403	chr16	+	15949804	15950421	True	NM_002474,NM_001040113,NM_004996,NM_001040114,NM_022844	chr16,chr16,chr16,chr16,chr16	-,-,+,-,-	MYH11,MYH11,ABCC1,MYH11,MYH11	516,516,93012,516,516
chr19:48774775-48775068	chr19	+	48774891	48775103	True	NM_001184904,NM_153608	chr19,chr19	-,+	CARD8,ZNF114	-15688,-288
chr5:122886398-122888131	chr5	+	122886425	122888193	True	NM_004384,NM_153223	chr5,chr5	+,-	CSNK1G3,CEP120	-38695,-127139
chr22:43540023-43540567	chr22	+	43540069	43540369	True	NM_173467,NM_014507,NM_007311,NM_000714	chr22,chr22,chr22,chr22	-,-,+,+	MCAT,MCAT,TSPO,TSPO	-666,-666,7165,7165
chr10:118351989-118353901	chr10	+	118352198	118353930	True	NM_006229,NM_144661	chr10,chr10	+,-	PNLIPRP1,C10orf82	-1759,75601
chr10:14997021-14997557	chr10	+	14997263	14997381	True	NM_001080836,NM_001033858,NM_022487,NM_001033857,NM_001033855	chr10,chr10,chr10,chr10,chr10	+,-,-,-,-	MEIG1,DCLRE1C,DCLRE1C,DCLRE1C,DCLRE1C	4056,-1169,-1169,-1169,-1169
chr5:148031058-148033056	chr5	+	148031169	148033087	True	NM_000024,NM_000870	chr5,chr5	+,-	ADRB2,HTR4	173068,702
chr1:154160671-154160871	chr1	+	154160811	154160879	True	NM_001043352,NM_001043353,NM_001043351,NM_153649,NR_030600,NM_152263,NM_001127320	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,-,+	TPM3,TPM3,TPM3,TPM3,MIR190B,TPM3,UBAP2L	-5086,-5086,-5086,-5086,5390,3780,31775
chr10:118505637-118506944	chr10	+	118505896	118506988	True	NM_025015,NM_005396	chr10,chr10	-,+	HSPA12A,PNLIPRP2	-3811,-125482
chr8:10511786-10512551	chr8	+	10511835	10512289	True	NM_001040032,NM_178857	chr8,chr8	+,-	C8orf74,RP1L1	17857,378
chrX:153047087-153047359	chrX	+	153047163	153047301	True	NM_014370,NM_001170760,NM_001170761,NM_004135	chrX,chrX,chrX,chrX	+,+,+,-	SRPK3,SRPK3,SRPK3,IDH3G	-758,-758,-758,12716
chrX:103085264-103086929	chrX	+	103085371	103086653	True	NM_199478,NM_016370	chrX,chrX	+,-	PLP1,RAB9B	-53668,609
chr9:45352119-45352551	chr9	+	45352283	45352599	True	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-362098,-1721553
chr9:45352119-45352551	chr9	+	66489670	66489732	False	NR_024443,NR_024496	chr9,chr9	-,+	LOC100133920,LOC442421	541300,4536
chrX:24480527-24481880	chrX	+	24480952	24481699	True	NM_001136233,NM_005391,NM_001142386	chrX,chrX,chrX	-,+,+	FAM48B2,PDK3,PDK3	-149520,1644,1644
chr14:50088496-50088957	chr14	+	50088523	50088987	True	NM_002408,NM_001001	chr14,chr14	+,-	MGAT2,RPL36AL	-1085,-1174
chr19:38794463-38794747	chr19	+	38794502	38794768	True	NM_033557,NM_033520	chr19,chr19	-,+	YIF1B,C19orf33	5791,35
chr1:90108328-90109407	chr1	+	90108971	90109442	True	NR_033981,NM_032270	chr1,chr1	-,+	FLJ27354,LRRC8C	-10518,-10392
chr19:49567417-49567998	chr19	+	49567485	49568029	True	NM_031886,NM_006179,NM_033043,NM_033142,NM_003089	chr19,chr19,chr19,chr19,chr19	-,-,+,-,+	KCNA7,NTF4,CGB5,CGB7,SNRNP70	8219,-361,-20434,-8488,20435
chr9:103790964-103791250	chr9	+	103791003	103791293	True	NM_207299,NM_001127610	chr9,chr9	+,-	LPPR1,BAAT	-24,354558
chr4:1341774-1342117	chr4	+	1341776	1342020	True	NM_001328,NM_020894	chr4,chr4	-,+	CTBP1,KIAA1530	-98868,-724
chr3:127873585-127874049	chr3	+	127873585	127873916	True	NM_021937,NM_003707	chr3,chr3	+,-	EEFSEC,RUVBL1	-1329,-30914
chr10:12106636-12108212	chr10	+	12106910	12108204	True	NM_018706,NM_080599	chr10,chr10	+,-	DHTKD1,UPF2	2729,-21887
chr11:66490431-66491611	chr11	+	66490485	66491359	True	NM_024650,NM_006946	chr11,chr11	+,-	C11orf80,SPTBN2	20847,-1615
chr15:54320978-54321604	chr15	+	54321137	54321618	True	NM_182758,NM_001080534	chr15,chr15	-,+	WDR72,UNC13C	-269278,-16088
chr17:56557599-56558170	chr17	+	56557602	56557995	True	NM_001080439,NM_002876	chr17,chr17	-,+	HSF5,RAD51C	7817,211967
chr15:28983831-28984739	chr15	+	28983964	28984791	True	NR_033351,NR_026589	chr15,chr15	-,+	GOLGA8F,WHAMML2	-205821,-1287
chr15:28983831-28984739	chr15	+	30764262	30764313	False	NM_148911,NR_026858	chr15,chr15	-,+	CHRFAM7A,FAM7A1	-78398,100444
chr15:28983831-28984739	chr15	-	32827814	32827865	False	NM_199357,NR_036650	chr15,chr15	+,-	ARHGAP11A,LOC100288615	79825,-1872
chr4:166131161-166132604	chr4	+	166131263	166132652	True	NM_001161522,NM_007246,NM_001161521,NR_026575	chr4,chr4,chr4,chr4	+,+,+,-	KLHL2,KLHL2,KLHL2,GK3P	-144,-2545,-144,68580
chr18:29304016-29304230	chr18	+	29304070	29304147	True	NM_001034172,NM_000371	chr18,chr18	-,+	MCART2,TTR	36747,-132391
chr11:89450295-89452235	chr11	+	89450570	89452051	True	NM_001146162,NM_020358	chr11,chr11	+,-	TRIM77,TRIM49	-7155,89743
chr13:112722620-112722981	chr13	+	112722675	112722939	True	NM_006322,NM_005986	chr13,chr13	-,+	TUBGCP3,SOX1	519592,-813
chr22:20116657-20117172	chr22	+	20116666	20117166	True	NM_001185024,NM_013373,NM_182984	chr22,chr22,chr22	+,+,-	ZDHHC8,ZDHHC8,TRMT2A	2197,2197,-11898
chr20:23113058-23114404	chr20	+	23113139	23114444	True	NR_034149,NM_001052	chr20,chr20	-,+	LOC200261,SSTR4	4,-97133
chr17:40950822-40951268	chr17	+	40950928	40951182	True	NM_173478,NM_001040431	chr17,chr17	+,-	CNTD1,CCDC56	-125,-224
chr9:131318354-131320241	chr9	+	131318795	131319950	True	NM_001195532,NM_001130438,NM_052844,NM_003127	chr9,chr9,chr9,chr9	+,+,-,+	SPTAN1,SPTAN1,WDR34,SPTAN1	-4016,-4016,99230,-4016
chr12:69080987-69082774	chr12	+	69081052	69082632	True	NM_020401,NR_033335	chr12,chr12	+,-	NUP107,SNORA70G	-372,-59897
chr2:242675268-242675625	chr2	+	242675453	242675517	True	NM_152783,NR_033255	chr2,chr2	+,-	D2HGDH,DTYMK	-1474,-49070
chr6:34859697-34861539	chr6	+	34859700	34861418	True	NM_005643,NM_015245	chr6,chr6	-,+	TAF11,ANKS1A	-3881,-2713
chr20:17226750-17228241	chr20	+	17227032	17228274	True	NM_001195,NM_002594	chr20,chr20	-,+	BFSP1,PCSK2	283789,-19486
chr13:19799559-19800393	chr13	+	19799643	19800329	True	NM_006001,NR_034026	chr13,chr13	-,+	TUBA3C,LOC100287114	-43651,118859
chr18:7118145-7118700	chr18	+	7118265	7118409	True	NM_005559,NM_001105581	chr18,chr18	-,+	LAMA1,LRRC30	-452,112727
chr7:139170174-139171326	chr7	+	139170408	139171062	True	NM_198508,NM_001080511	chr7,chr7	-,+	KLRG2,CLEC2L	-1951,37611
chr9:130740467-130740828	chr9	+	130740562	130740686	True	NM_001035254,NM_001006641	chr9,chr9	-,+	FAM102A,SLC25A25	2176,89792
chr9:109624739-109625196	chr9	+	109624747	109625237	True	NR_031752,NM_021224	chr9,chr9	-,+	MIR548Q,ZNF462	223529,140
chr2:182406639-182408431	chr2	+	182406689	182408339	True	NM_001030311,NM_000885	chr2,chr2	-,+	CERKL,ITGA4	113545,-85121
chr4:177241748-177242916	chr4	+	177241862	177242934	True	NM_021928,NM_080874	chr4,chr4	+,-	SPCS3,ASB5	-823,-51489
chr7:142985719-142986187	chr7	+	142985890	142986236	True	NM_032983,NM_032982,NM_153345,NM_014690	chr7,chr7,chr7,chr7	+,+,+,-	CASP2,CASP2,TMEM139,FAM131B	-633,-633,-3878,72987
chr5:138610536-138610823	chr5	+	138610616	138610680	True	NR_003141,NR_002915,NR_036536,NR_036535,NM_022464,NM_199189,NM_001194954	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,-,+,+	SNHG4,SNORA74A,SNHG4,MATR3,SIL1,MATR3,MATR3	-1232,3788,-1232,-1232,-76551,-1232,-1232
chr16:1201009-1201489	chr16	+	1201016	1201510	True	NM_021098,NM_207419,NM_001005407	chr16,chr16,chr16	+,-,+	CACNA1H,C1QTNF8,CACNA1H	1730,-54772,1730
chr4:17516299-17517592	chr4	+	17516379	17517464	True	NM_001079827,NM_000320	chr4,chr4	+,-	CLRN2,QDPR	92,-2522
chr12:48517183-48518696	chr12	+	48517248	48518408	True	NM_000289,NM_001166688,NM_014554,NM_001166687	chr12,chr12,chr12,chr12	+,+,-,+	PFKM,PFKM,SENP1,PFKM	-4287,-870,-17607,-870
chr16:69796566-69797737	chr16	+	69796752	69797534	True	NM_014062,NM_199423,NM_007014	chr16,chr16,chr16	-,+,+	NOB1,WWP2,WWP2	-7923,-533,-533
chr17:57234148-57234917	chr17	+	57234277	57234785	True	NM_182620,NR_029842,NM_018304,NM_001100595	chr17,chr17,chr17,chr17	-,-,+,-	SKA2,MIR301A,PRR11,SKA2	-1477,-5695,-1468,-1477
chr16:4665324-4665540	chr16	+	4665370	4665508	True	NM_001142289,NM_001142291,NM_001142290,NM_145253,NM_015246	chr16,chr16,chr16,chr16,chr16	+,+,+,-,+	MGRN1,MGRN1,MGRN1,FAM100A,MGRN1	9317,9317,9317,-443,9317
chrX:44403019-44403721	chrX	+	44403151	44403544	True	NM_022076,NM_173794	chrX,chrX	+,-	DUSP21,FUNDC1	299704,-930
chr16:78133732-78133946	chr16	+	78133737	78133943	True	NM_199355,NM_016373,NM_130791,NM_130844	chr16,chr16,chr16,chr16	-,+,+,+	ADAMTS18,WWOX,WWOX,WWOX	-664726,-237,-237,-237
chr22:28199894-28200215	chr22	+	28199948	28200116	True	NM_002430,NR_026962	chr22,chr22	-,+	MN1,TTC28-AS1	-2462,115247
chr4:154712523-154712900	chr4	+	154712552	154712886	True	NM_003264,NM_003013	chr4,chr4	+,-	TLR2,SFRP2	-107162,-2324
chr3:107631682-107631983	chr3	+	107631854	107632030	True	NR_015394,NR_024276	chr3,chr3	+,-	LOC285205,LOC151658	-29853,-34939
chr16:2891065-2891304	chr16	+	2891160	2891340	True	NR_026864,NM_145252	chr16,chr16	-,+	PRSS30P,ZG16B	1462,-11038
chr12:57474081-57475975	chr12	+	57474740	57475375	True	NM_001130963,NM_005967,NM_015257	chr12,chr12,chr12	-,+,-	TMEM194A,NAB2,TMEM194A	-2166,7301,-2166
chr5:35926032-35926539	chr5	+	35926199	35926587	True	NM_002185,NM_001042625	chr5,chr5	+,-	IL7R,CAPSL	-69261,12200
chr6:52152968-52153179	chr6	+	52153111	52153227	True	NM_133367,NM_002388	chr6,chr6	+,-	PAQR8,MCM3	73698,-3529
chr20:1517037-1517816	chr20	+	1517088	1517779	True	NM_014723,NM_178460	chr20,chr20	+,-	SNPH,SIRPD	-270187,20614
chr15:74420718-74421005	chr15	+	74420787	74420981	True	NM_001130137,NM_001130136,NM_001130138,NM_020851,NR_027073	chr15,chr15,chr15,chr15,chr15	+,+,+,+,-	ISLR2,ISLR2,ISLR2,ISLR2,LOC283731	1014,733,1608,1761,688
chr6:4348283-4349438	chr6	+	4348427	4348948	True	NR_028588,NM_001085401	chr6,chr6	-,+	ECI2,C6orf201	-212596,-269038
chr19:19842847-19843342	chr19	+	19842886	19843138	True	NM_033204,NM_021030	chr19,chr19	+,-	ZNF101,ZNF14	-63288,835
chr11:562260-562493	chr11	+	562260	562524	True	NR_029623,NM_173573,NM_001143994,NM_001143993,NM_003475	chr11,chr11,chr11,chr11,chr11	-,-,+,+,+	MIR210,C11orf35,RASSF7,RASSF7,RASSF7	5724,-1481,-861,-1340,-861
chr17:17939812-17941740	chr17	+	17940031	17941628	True	NM_024052,NM_145691	chr17,chr17	+,-	C17orf39,ATPAF2	982,902
chr3:61548864-61549135	chr3	+	61548957	61549053	True	NM_002841,NM_002012	chr3,chr3	+,-	PTPRG,FHIT	-1768,-311824
chr17:74258797-74260292	chr17	+	74258815	74260224	True	NM_052916,NM_182565	chr17,chr17	-,+	RNF157,FAM100B	-22425,1061
chr3:38392421-38393786	chr3	+	38392808	38393832	True	NM_005108,NR_028389	chr3,chr3	+,-	XYLB,LOC100128640	-4614,102529
chr6:82568046-82568962	chr6	+	82568138	82568944	True	NM_006670,NM_017633	chr6,chr6	+,-	TPBG,FAM46A	503978,-105710
chr3:122211000-122212681	chr3	+	122211065	122212590	True	NM_002264,NM_138287	chr3,chr3	-,+	KPNA1,DTX3L	21247,70594
chr2:122404470-122406362	chr2	+	122405091	122406225	True	NR_037856,NR_037858,NM_001142274,NR_037857,NM_015282,NM_001142273	chr2,chr2,chr2,chr2,chr2,chr2	+,+,-,+,-,-	LOC254128,LOC254128,CLASP1,LOC254128,CLASP1,CLASP1	1339,1004,877,1004,877,877
chr6:31433998-31435284	chr6_mcf_hap5	+	2813861	2815100	False	NR_002812,NM_006674,NR_003140	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	+,+,-	HCG26,HCP5,SNORD117	3685,-2008,68926
chr6:31433998-31435284	chr6	+	31434080	31435319	True	NR_002812,NM_006674,NR_003140	chr6,chr6,chr6	+,+,-	HCG26,HCP5,SNORD117	3686,-3174,68957
chr6:31433998-31435284	chr6_ssto_hap7	+	2764850	2766089	False	NR_002812,NM_006674,NR_003140	chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7	+,+,-	HCG26,HCP5,SNORD117	3682,-3174,68992
chr6:31433998-31435284	chr6_cox_hap2	+	2944343	2944973	False	NR_002812,NM_006674,NR_003140	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,+,-	HCG26,HCP5,SNORD117	3686,-3783,68965
chr15:67457244-67457482	chr15	+	67457326	67457422	True	NM_001145104,NM_024666	chr15,chr15	+,-	SMAD3,AAGAB	1070,89702
chr9:71626692-71627997	chr9	+	71626989	71628033	True	NM_000144,NM_002732	chr9,chr9	+,-	FXN,PRKACG	22445,1056
chr7:105514493-105515483	chr7	+	105514672	105515481	True	NM_020725,NM_152750,NM_152749	chr7,chr7,chr7	-,+,-	ATXN7L1,CDHR3,ATXN7L1	1613,88175,1613
chr10:925804-926346	chr10	+	926032	926136	True	NM_015155,NM_012341	chr10,chr10	-,+	LARP4B,GTPBP4	5616,108212
chr6:43647070-43648380	chr6	+	43647072	43648139	True	NM_152732,NM_018135,NM_001193343	chr6,chr6,chr6	+,-,-	RSPH9,MRPS18A,MRPS18A	-34356,7460,7460
chr9:46302782-46303615	chr9	+	46302918	46302984	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2672188,384581
chr9:46302782-46303615	chr9	+	67711857	67711923	False	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	82318,214837
chr9:46302782-46303615	chr9	-	45080101	45080262	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-90027,-1449371
chr9:46302782-46303615	chr9	-	45814938	45815004	False	NM_001145196,NR_024060	chr9,chr9	-,+	FAM75A6,FAM27A	-2184208,-87962
chr9:46302782-46303615	chr9	-	46201253	46201319	False	NM_001145196,NR_024060	chr9,chr9	-,+	FAM75A6,FAM27A	-2570523,-474277
chr5:170736658-170736867	chr5	+	170736674	170736884	True	NM_021025,NR_037474	chr5,chr5	+,-	TLX3,MIR3912	-437,76930
chr5:149492176-149492657	chr5	+	149492180	149492564	True	NM_005211,NM_001804	chr5,chr5	-,+	CSF1R,CDX1	421,53779
chr3:42198361-42199505	chr3	+	42198976	42199533	True	NM_014965,NM_001174138	chr3,chr3	+,-	TRAK1,CCK	2127,105967
chr1:26125408-26125986	chr1	+	26125450	26125918	True	NM_206926,NM_020451,NR_024498	chr1,chr1,chr1	+,+,-	SEPN1,SEPN1,LOC646471	748,748,24229
chr12:69760612-69761439	chr12	+	69760762	69761123	True	NM_006530,NR_031692	chr12,chr12	+,-	YEATS4,MIR1279	-7289,-93764
chr7:99214247-99214448	chr7	+	99214294	99214484	True	NM_145115,NM_000777	chr7,chr7	+,-	ZNF498,CYP3A5	86,63187
chr3:170587726-170587946	chr3	+	170587766	170587976	True	NM_001099645,NM_001185056	chr3,chr3	-,+	RPL22L1,CLDN11	119,-448789
chr12:72057565-72057784	chr12	+	72057651	72057799	True	NM_031435,NM_144982	chr12,chr12	+,-	THAP2,ZFC3H1	-25,0
chr16:12997207-12997461	chr16	+	12997237	12997437	True	NM_001145205,NM_001145204,NM_018340	chr16,chr16,chr16	+,+,-	SHISA9,SHISA9,CPPED1	-1811,-1811,-99493
chr17:34135142-34135562	chr17	+	34135148	34135578	True	NM_001032278,NM_139215,NM_003487	chr17,chr17,chr17	-,+,+	MMP28,TAF15,TAF15	-12508,909,909
chr11:77783521-77784770	chr11	+	77783567	77784144	True	NM_001204054,NM_001204055,NM_003251,NM_001203260,NM_001203261,NM_001203262,NM_004549	chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,+,-,-,-,-	NDUFC2,NDUFC2,THRSP,NDUFC2-KCTD14,NDUFC2-KCTD14,NDUFC2-KCTD14,NDUFC2	7172,7172,-8712,7172,7172,7172,7172
chr7:28220382-28220841	chr7	+	28220565	28220893	True	NR_034097,NM_175061	chr7,chr7	+,-	LOC100128081,JAZF1	-540,-128
chr1:54667833-54669442	chr1	+	54668047	54669036	True	NM_001031672,NM_016491	chr1,chr1	-,+	CYB5RL,MRPL37	-2301,-2265
chr12:13350072-13350429	chr12	+	13350102	13350235	True	NM_001080555,NM_001423	chr12,chr12	-,+	GSG1,EMP1	-93483,-551
chr2:38889376-38889761	chr2	+	38889413	38889521	True	NM_138801,NM_138394	chr2,chr2	+,-	GALM,HNRPLL	3530,-59235
chr22:40393053-40393860	chr22	+	40393081	40393735	True	NM_152512,NM_138435	chr22,chr22	-,+	ENTHD1,FAM83F	-103287,-2188
chr5:140870211-140870422	chr5	+	140870258	140870394	True	NM_032406,NM_032407,NM_018929,NM_018928,NM_001079812	chr5,chr5,chr5,chr5,chr5	+,+,+,+,-	PCDHGC4,PCDHGC5,PCDHGC5,PCDHGC4,DIAPH1	-5568,-1501,-1501,-5568,128278
chr1:32675676-32676356	chr1	+	32676127	32676316	True	NM_001160042,NM_018134,NM_001099434,NM_024296,NM_019118	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	IQCC,IQCC,DCDC2B,CCDC28B,TMEM234	-4942,-4942,-1483,-9976,11675
chr8:80996250-80997516	chr8	+	80996576	80997560	True	NM_001025252,NM_001105539	chr8,chr8	-,+	TPD52,ZBTB10	-3566,400887
chr1:45251154-45251793	chr1	+	45251168	45251802	True	NR_001456,NR_001457,NM_153274,NR_000024,NR_000015,NM_001012	chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,+,+,+	SNORD38A,SNORD38B,BEST4,SNORD46,SNORD55,RPS8	-7705,-7157,1674,-9055,-9682,-9973
chr5:88185852-88187520	chr5	+	88185956	88187003	True	NM_006467,NM_002397,NM_001193350	chr5,chr5,chr5	+,-,-	POLR3G,MEF2C,MEF2C	1583677,-6673,-6673
chr4:148537376-148538715	chr4	+	148537524	148538660	True	NM_018241,NM_138364	chr4,chr4	+,-	TMEM184C,PRMT10	-122,66670
chr3:42136157-42136392	chr3	+	42136247	42136419	True	NM_001042646,NM_017886	chr3,chr3	+,-	TRAK1,ULK4	-3563,-132587
chr9:19128903-19129217	chr9	+	19129033	19129097	True	NM_001122,NR_038064,NM_006570	chr9,chr9,chr9	-,-,+	PLIN2,PLIN2,RRAGA	-1429,-1429,-79712
chr2:95524160-95524479	chr2	+	95524171	95524307	True	NR_003366,NM_144705	chr2,chr2	-,+	ANKRD20A8P,TEKT4	-1351,12924
chr2:95524160-95524479	chr9	-	69380722	69380784	False	NM_001085457,NM_001098805	chr9,chr9	-,+	CBWD6,ANKRD20A4	-118129,1196
chr2:95524160-95524479	chr9	+	43134740	43134802	False	NM_001012419,NR_026558,NM_001012421	chr9,chr9,chr9	-,+,-	ANKRD20A3,AQP7P3,ANKRD20A2	-1196,-276647,-1196
chr2:95524160-95524479	chr9	+	44119756	44119818	False	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	-489026,-434930
chr8:128176709-128177907	chr8	+	128176718	128177612	True	NM_001159542,NR_024393	chr8,chr8	+,-	POU5F1B,LOC727677	250244,316830
chr17:17110283-17110497	chr17	+	17110374	17110545	True	NM_178836,NM_020201	chr17,chr17	-,+	PLD6,NT5M	-728,96134
chr11:108370780-108370986	chr11	+	108370779	108371027	True	NM_153705,NM_004398	chr11,chr11	-,+	KDELC2,DDX10	-1620,164788
chr9:136037787-136038214	chr9	+	136037886	136037948	True	NM_021996,NR_001275	chr9,chr9	-,+	GBGT1,CELP	1403,-80011
chr16:2261127-2261327	chr16	+	2261158	2261290	True	NM_001199174,NM_001199175,NM_001199173,NM_182563,NM_022372,NM_001042371	chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,-,+,-	MLST8,MLST8,MLST8,C16orf79,MLST8,PGP	-5477,-6031,-6031,-89,-6031,3582
chr13:21275588-21276050	chr13	+	21275650	21275948	True	NM_138284,NM_174928	chr13,chr13	+,-	IL17D,N6AMT2	1533,72171
chr13:53021101-53021894	chr13	+	53021310	53021913	True	NM_001098525,NM_018204,NM_016075	chr13,chr13,chr13	+,+,-	CKAP2,CKAP2,VPS36	7581,7581,2909
chr2:220071857-220072640	chr2	+	220071942	220072662	True	NM_138802,NM_005689	chr2,chr2	+,-	ZFAND2B,ABCB6	-455,11100
chr2:73613020-73613246	chr2	+	73613087	73613239	True	NM_001965,NM_015120	chr2,chr2	-,+	EGR4,ALMS1	-92258,-252
chr17:4268520-4268721	chr17	+	4268616	4268740	True	NM_003342,NM_182538	chr17,chr17	-,+	UBE2G1,SPNS3	1279,68478
chr2:197504669-197505845	chr2	+	197504728	197505636	True	NM_020760,NM_001080539	chr2,chr2	-,+	HECW2,CCDC150	-47393,-423
chr11:100999427-100999689	chr11	+	100999441	100999687	True	NM_032021,NM_001202474,NM_000926	chr11,chr11,chr11	+,-,-	TMEM133,PGR,PGR	-136681,157,907
chr1:85463974-85464303	chr1	+	85464055	85464325	True	NM_145172,NM_153259	chr1,chr1	+,-	WDR63,MCOLN2	63667,-1259
chr10:46936978-46937901	chr10	+	46937112	46937718	True	NR_027632,NM_181519	chr10,chr10	+,-	FAM35B,SYT15	-39538,32933
chr10:46936978-46937901	chr10	+	88949741	88949791	False	NM_005271,NM_001099338	chr10,chr10	-,+	GLUD1,FAM22A	-94965,35413
chr10:46936978-46937901	chr10	+	47419201	47419699	False	NR_024495,NR_027634	chr10,chr10	-,+	LOC642826,FAM35B2	-175707,-39548
chr22:22336116-22336770	chr22	+	22336237	22336624	True	NM_007128,NM_003935	chr22,chr22	+,-	VPREB1,TOP3B	262575,574
chr14:24582930-24583205	chr14	+	24582929	24583243	True	NM_016049,NM_001163484,NM_181357,NR_028100,NR_028099,NM_025230	chr14,chr14,chr14,chr14,chr14,chr14	-,+,+,+,+,+	FAM158A,DCAF11,DCAF11,DCAF11,DCAF11,DCAF11	27604,662,1250,1248,742,742
chr17:27574988-27575473	chr17	+	27575161	27575369	True	NM_005208,NM_020772	chr17,chr17	+,-	CRYBA1,NUFIP2	-1337,45847
chr17:39845862-39846372	chr17	+	39845972	39846420	True	NM_005801,NM_001079870	chr17,chr17	+,-	EIF1,HAP1	-896,44528
chr4:15964421-15966153	chr4	+	15964536	15966079	True	NM_031950,NM_001775	chr4,chr4	-,+	FGFBP2,CD38	119,-184656
chr20:4988714-4989125	chr20	+	4988969	4989173	True	NM_005116,NR_028370,NM_203327	chr20,chr20,chr20	-,+,-	SLC23A2,PCNA-AS1,SLC23A2	-6824,111058,1816
chr6:53610943-53612610	chr6	+	53611279	53612649	True	NM_018214,NM_001003760	chr6,chr6	+,-	LRRC1,KLHL31	47128,-80773
chr12:27152251-27153483	chr12	+	27152461	27153149	True	NM_004264,NM_016551	chr12,chr12	+,-	MED21,TM7SF3	22333,14249
chr19:11531449-11532108	chr19	+	11531499	11531883	True	NM_001001329,NM_001161616,NM_001035223	chr19,chr19,chr19	+,-,-	PRKCSH,RGL3,RGL3	14385,-1481,-1481
chr10:116583550-116584059	chr10	+	116583602	116584076	True	NM_001135051,NM_020940,NM_001003408	chr10,chr10,chr10	+,+,-	FAM160B1,FAM160B1,ABLIM1	-2163,-2163,-139188
chr22:50248401-50248905	chr22	+	50248415	50248940	True	NM_014838,NM_014577	chr22,chr22	+,-	ZBED4,BRD1	-969,-29963
chr7:23720857-23721320	chr7	+	23720893	23721374	True	NM_199136,NR_002711,NM_001127364,NM_001127365	chr7,chr7,chr7,chr7	+,-,+,+	C7orf46,CLK2P,C7orf46,C7orf46	-1195,-94747,-1195,-1195
chr19:8385575-8385871	chr19	+	8385574	8385778	True	NM_005001,NM_001031	chr19,chr19	-,+	NDUFA7,RPS28	552,605
chr2:27589754-27590252	chr2	+	27589766	27590182	True	NM_001034116,NM_014748,NM_001521,NM_015636,NM_001035521,NM_172195	chr2,chr2,chr2,chr2,chr2,chr2	-,+,-,-,-,-	EIF2B4,SNX17,GTF3C2,EIF2B4,GTF3C2,EIF2B4	3192,3206,-9898,3192,-9898,2787
chr12:10527271-10528566	chr12	+	10527335	10528588	True	NM_007360,NM_007334	chr12,chr12	-,+	KLRK1,KLRD1	14116,-66977
chr3:233354-234279	chr3	+	233600	234225	True	NM_000564,NM_006614	chr3,chr3	-,+	IL5RA,CHL1	2917890,4424
chr5:9907504-9908320	chr5	+	9907551	9908358	True	NR_027112,NM_012073	chr5,chr5	-,+	LOC285692,CCT5	-3615,341923
chr12:125018400-125019239	chr12	+	125018399	125019278	True	NM_001077261,NM_181709	chr12,chr12	-,+	NCOR2,FAM101A	32782,-244740
chr11:119187076-119187411	chr11	+	119187106	119187390	True	NM_032015,NM_006500	chr11,chr11	+,-	RNF26,MCAM	17846,500
chr3:125093620-125093844	chr3	+	125093630	125093728	True	NM_021964,NR_024250	chr3,chr3	-,+	ZNF148,LOC100125556	520,541715
chr3:38798176-38798603	chr3	+	38798252	38798649	True	NM_005107,NM_006514	chr3,chr3	+,-	EXOG,SCN10A	-260540,36903
chr1:43889062-43889300	chr1	+	43889034	43889344	True	NM_001190880,NM_015284	chr1,chr1	-,+	HYI,KIAA0467	30366,-288
chr7:39686732-39687149	chr7	+	39686942	39687178	True	NM_138701,NM_005402	chr7,chr7	-,+	C7orf11,RALA	487123,-23841
chr11:102216817-102217586	chr11	+	102216886	102217446	True	NM_001166,NM_052932	chr11,chr11	+,-	BIRC2,TMEM123	519,106379
chr10:62538446-62538707	chr10	+	62538586	62538664	True	NM_033379,NM_001170407,NM_001786,NM_001204403,NM_001170406	chr10,chr10,chr10,chr10,chr10	+,+,+,-,+	CDK1,CDK1,CDK1,ANK3,CDK1	-425,-425,-425,-45302,-548
chr10:71561111-71561370	chr10	+	71561179	71561385	True	NM_080802,NM_080800,NM_001130103,NM_080801,NM_080798,NM_020999,NM_080805	chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,-,+	COL13A1,COL13A1,COL13A1,COL13A1,COL13A1,NEUROG3,COL13A1	258,258,258,258,258,-227969,258
chr16:30619898-30620692	chr16	+	30619948	30620682	True	NM_138447,NM_024031	chr16,chr16	-,+	ZNF689,PRR14	1051,41558
chr19:54677794-54678022	chr19	+	54677858	54677974	True	NM_001145303,NM_144686,NM_024075	chr19,chr19,chr19	-,-,+	TMC4,TMC4,TSEN34	-914,-914,16144
chr17:18280468-18281582	chr17	+	18280768	18281604	True	NM_148918,NM_001145127	chr17,chr17	-,+	SHMT1,EVPLL	-13912,80
chr7:142457104-142458595	chr7	+	142457269	142458565	True	NM_002769,NM_018646	chr7,chr7	+,-	PRSS1,TRPV6	-1,124962
chr22:19167558-19167795	chr22	+	19167671	19167805	True	NM_053006,NM_005984,NR_033687	chr22,chr22,chr22	+,-,-	TSSK2,SLC25A1,SLC25A1	-49401,-1370,-1637
chr4:15657563-15657931	chr4	+	15657610	15657966	True	NM_001193534,NM_001193535,NM_012161,NM_001145191,NR_036464	chr4,chr4,chr4,chr4,chr4	-,-,-,+,-	FBXL5,FBXL5,FBXL5,FAM200B,FBXL5	-575,-575,-575,25385,-575
chr17:46870903-46871871	chr17	+	46870972	46871888	True	NM_005831,NM_173623	chr17,chr17	+,-	CALCOCO2,TTLL6	36483,-8
chr5:148522200-148523796	chr5	+	148522215	148523610	True	NM_024577,NM_014945	chr5,chr5	-,+	SH3TC2,ABLIM3	-79478,-1212
chr17:72543407-72543750	chr17	+	72543455	72543775	True	NM_152460,NM_006678	chr17,chr17	+,-	C17orf77,CD300C	37281,-1173
chr22:50971599-50971821	chr22	+	50971709	50971780	True	NM_005138,NM_001953,NM_001169111,NM_001169110,NM_001113756,NM_001169109,NM_001113755,NM_001014440,NM_138433	chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,-,-,-,-,+	SCO2,TYMP,SCO2,SCO2,TYMP,SCO2,TYMP,ODF3B,KLHDC7B	-7675,-3195,-7676,-7135,-3451,-6841,-3195,-701,14681
chr16:89754783-89755228	chr16	+	89754794	89755220	True	NM_001098533,NM_001160367,NM_052987,NR_027702,NR_027703,NM_152339,NM_052988	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,-,+	CDK10,CDK10,CDK10,CDK10,CDK10,SPATA2L,CDK10	-1769,-1769,-1769,-1769,-1769,12951,-1769
chr19:9948466-9949289	chr19	+	9948700	9949156	True	NM_006221,NM_017703	chr19,chr19	+,-	PIN1,FBXL12	-2753,-18969
chr19:2428120-2428523	chr19	+	2428135	2428511	True	NM_182973,NM_012458	chr19,chr19	+,-	TMPRSS9,TIMM13	-38408,-260
chr1:155278434-155278800	chr1	+	155278457	155278849	True	NM_001135822,NM_002004,NM_000298,NM_001135821,NM_181871	chr1,chr1,chr1,chr1,chr1	+,+,-,+,-	FDPS,FDPS,PKLR,FDPS,PKLR	31,31,-7232,-1,-7665
chr12:7120972-7122053	chr12	+	7121170	7121864	True	NM_005768,NM_006331	chr12,chr12	-,+	LPCAT3,EMG1	4028,-41282
chr2:113888554-113890338	chr2	+	113888621	113890270	True	NM_173842,NM_173178	chr2,chr2	+,-	IL1RN,IL1F8	-3534,-78181
chr14:73701521-73703021	chr14	+	73701761	73702870	True	NM_021260,NM_173462	chr14,chr14	-,+	ZFYVE1,PAPLN	-207841,1334
chr10:69449414-69449864	chr10	+	69449486	69449886	True	NM_013266,NM_012238	chr10,chr10	-,+	CTNNA3,SIRT1	6113,194540
chr2:229046132-229047320	chr2	+	229046206	229047320	True	NM_178821,NM_001142644,NM_030623	chr2,chr2,chr2	+,-,-	WDR69,SPHKAP,SPHKAP	-309930,143,143
chr22:29226203-29226508	chr22	+	29226317	29226385	True	NM_005080,NM_032173	chr22,chr22	-,+	XBP1,ZNRF3	-29757,53504
chr7:73097518-73097786	chr7	+	73097529	73097825	True	NR_037776,NM_017528,NM_001202560,NM_032317	chr7,chr7,chr7,chr7	+,+,+,-	WBSCR22,WBSCR22,WBSCR22,DNAJC30	72,72,72,6
chr9:136202087-136202595	chr9	+	136202107	136202535	True	NM_000972,NM_006753	chr9,chr9	+,-	RPL7A,SURF6	12533,562
chr4:987833-988109	chr4	+	987877	987955	True	NM_022042,NM_000203,NM_134425,NM_213613	chr4,chr4,chr4,chr4	-,+,-,-	SLC26A1,IDUA,SLC26A1,SLC26A1	-694,-7145,-694,-653
chr15:78800324-78800854	chr15	+	78800326	78800850	True	NM_001083612,NM_001166694,NM_001013619	chr15,chr15,chr15	+,-,+	AGPHD1,CHRNA3,AGPHD1	-471,112838,-471
chr3:53292298-53293863	chr3	+	53292311	53293889	True	NM_001064,NM_001135055,NM_212539	chr3,chr3,chr3	-,-,+	TKT,TKT,PRKCD	-2181,-2181,-97139
chr19:15122590-15123996	chr19	+	15123069	15123941	True	NM_173482,NM_005071	chr19,chr19	+,-	CCDC105,SLC1A6	-1586,-39339
chr11:1242907-1243149	chr11	+	1242963	1243141	True	NM_019009,NM_002458	chr11,chr11	-,+	TOLLIP,MUC5B	87801,1153
chr14:73955134-73956708	chr14	+	73955405	73956622	True	NM_003744,NM_024644	chr14,chr14	-,+	NUMB,C14orf169	-30119,1021
chr7:93202741-93203759	chr7	+	93202761	93203609	True	NM_001164737,NM_001742,NM_021955	chr7,chr7,chr7	-,-,+	CALCR,CALCR,GNGT1	483,483,332210
chr17:27617195-27617479	chr17	+	27617195	27617367	True	NM_005208,NM_020772	chr17,chr17	+,-	CRYBA1,NUFIP2	-43375,3858
chr3:85834928-85835152	chr3	+	85834997	85835199	True	NR_033860,NM_153184	chr3,chr3	-,+	LOC440970,CADM2	-916271,-59430
chr3:48648265-48648983	chr3	+	48648283	48648971	True	NM_033629,NM_003365	chr3,chr3	+,-	TREX1,UQCRC1	-141105,-1185
chrY:21665079-21665419	chrY	+	21665147	21665350	True	NR_002923,NM_001005852,NR_033732	chrY,chrY,chrY	-,+,-	BCORP1,CYorf15A,BCORP1	-108,63884,-108
chr17:4490349-4490584	chr17	+	4490356	4490544	True	NM_198501,NM_001114974,NM_153338	chr17,chr17,chr17	+,+,-	SMTNL2,SMTNL2,GGT6	-3131,-2573,-26480
chr13:44181008-44182384	chr13	+	44181399	44182217	True	NM_001128303,NM_001127615	chr13,chr13	+,-	C13orf31,ENOX1	271202,21453
chr12:6422606-6423025	chr12	+	6422621	6423043	True	NM_001144857,NM_001144856,NM_001065,NM_018173	chr12,chr12,chr12,chr12	+,+,-,+	PLEKHG6,PLEKHG6,TNFRSF1A,PLEKHG6	-855,-2573,28290,-3070
chr1:236304767-236304969	chr1	+	236304770	236305016	True	NM_002508,NM_003272	chr1,chr1	-,+	NID1,GPR137B	-76289,815
chr2:113884159-113884557	chr2	+	113884162	113884536	True	NM_173842,NM_000577,NM_173841,NM_173178,NM_173843	chr2,chr2,chr2,chr2,chr2	+,+,+,-,+	IL1RN,IL1RN,IL1RN,IL1F8,IL1RN	601,-8752,-8752,-73722,-8752
chr1:160926978-160928268	chr1	+	160926988	160927900	True	NM_080878,NR_033385	chr1,chr1	-,+	ITLN2,KLHDC9	-2399,140250
chr12:85672518-85673294	chr12	+	85672666	85673209	True	NM_001100917,NM_006982	chr12,chr12	-,+	TSPAN19,ALX1	-242611,826
chr7:92197169-92197762	chr7	+	92197535	92197639	True	NR_026902,NR_034169	chr7,chr7	+,-	MGC16142,LOC728066	-29806,22115
chr1:111066396-111067109	chr1	+	111066471	111067102	True	NM_005549,NR_003599	chr1,chr1	-,+	KCNA10,CYMP	-4674,-43134
chr16:53089244-53091108	chr16	+	53089328	53090640	True	NM_001012398,NM_025134	chr16,chr16	-,+	AKTIP,CHD9	446580,-434
chr19:50143478-50143897	chr19	+	50143509	50143843	True	NM_006270,NM_021228	chr19,chr19	-,+	RRAS,SCAF1	-109,1538
chr2:31610644-31610931	chr2	+	31610719	31610855	True	NM_014600,NM_000379	chr2,chr2	+,-	EHD3,XDH	-153890,26806
chr15:43982334-43983131	chr15	+	43982405	43982881	True	NM_001015001,NM_172097	chr15,chr15	+,-	CKMT1A,CATSPER2	2202,-41366
chr15:43982334-43983131	chr15	+	43882573	43883049	False	NM_001190214,NM_014659,NM_001130858,NM_001130859,NM_020990	chr15,chr15,chr15,chr15,chr15	-,-,-,-,+	PPIP5K1,PPIP5K1,PPIP5K1,PPIP5K1,CKMT1B	-122,-5483,-122,-122,2202
chr14:37050705-37050906	chr14	+	37050753	37050885	True	NM_006194,NM_014360	chr14,chr14	+,-	PAX9,NKX2-8	75887,951
chr11:65555700-65556811	chr11	+	65555721	65556699	True	NM_138368,NM_004561	chr11,chr11	-,+	DKFZp761E198,OVOL1	-7899,-1243
chr15:65135284-65135488	chr15	+	65135322	65135516	True	NM_001195059,NM_025049,NM_025201	chr15,chr15,chr15	+,-,+	PLEKHO2,PIF1,PLEKHO2	-1291,-17484,-1291
chr12:49660554-49661161	chr12	+	49660700	49661078	True	NM_001008223,NM_032704	chr12,chr12	-,+	C1QL4,TUBA1C	69944,-1891
chr20:46014266-46015480	chr20	+	46015133	46015480	True	NM_183048,NR_024594	chr20,chr20	-,+	ZMYND8,LOC100131496	-29659,-67938
chr15:30395783-30396021	chr15	+	30395828	30395908	True	NR_026859,NM_175610	chr15,chr15	+,-	FAM7A3,TJP1	26,-281122
chr15:30395783-30396021	chr15	-	32727091	32727171	False	NR_027470,NR_026859,NR_026858,NM_199357	chr15,chr15,chr15,chr15	-,-,-,+	FAM7A2,FAM7A3,FAM7A1,ARHGAP11A	129,-26,129,180519
chr15:30395783-30396021	chr15	-	30685757	30685837	False	NM_148911,NM_139320,NR_026858	chr15,chr15,chr15	-,-,+	CHRFAM7A,CHRFAM7A,FAM7A1	77,77,178920
chr15:30395783-30396021	chr15	+	30864836	30864916	False	NR_027470,NM_148911,NR_026858	chr15,chr15,chr15	+,-,+	FAM7A2,CHRFAM7A,FAM7A1	-129,-178972,-129
chr19:54927161-54927507	chr19	+	54927161	54927349	True	NM_001201461,NM_198988,NM_020659,NM_001005367	chr19,chr19,chr19,chr19	+,-,+,+	TTYH1,LENG9,TTYH1,TTYH1	-607,47595,-607,-607
chr16:20359816-20360150	chr16	+	20359882	20360148	True	NM_001008389,NM_017888,NM_003361	chr16,chr16,chr16	-,+,-	UMOD,ACSM5,UMOD	3939,60707,3939
chr12:128084189-128084732	chr12	+	128084194	128084421	True	NR_033970,NR_033987	chr12,chr12	-,+	LOC440117,FLJ37505	-724958,281740
chr1:1678606-1679022	chr1	+	1678707	1678913	True	NM_182838,NM_001199787,NR_002946	chr1,chr1,chr1	-,-,+	SLC35E2,SLC35E2,MMP23A	-1269,-1269,-47380
chr1:1678606-1679022	chr1	+	1626478	1626684	False	NR_002946,NM_001110781	chr1,chr1	+,-	MMP23A,SLC35E2B	4693,-2235
chrX:152686160-152686848	chrX	+	152686329	152686759	True	NM_001136273,NM_080701	chrX,chrX	+,-	ZFP92,TREX2	-2599,25236
chr15:78632268-78632610	chr15	+	78632363	78632483	True	NM_004378,NM_025234	chr15,chr15	+,-	CRABP1,WDR61	182,-40423
chr14:78228376-78229256	chr14	+	78228865	78229128	True	NM_174943,NM_001173978,NM_012245	chr14,chr14,chr14	+,+,-	C14orf178,C14orf178,SNW1	-1743,-1743,-1368
chr19:51457681-51458191	chr19	+	51457828	51458122	True	NM_001077492,NM_012427,NM_005551,NM_001077491	chr19,chr19,chr19,chr19	-,-,+,-	KLK5,KLK5,KLK2,KLK5	-1484,-1484,-81191,-1484
chr21:39871128-39871535	chr21	+	39871164	39871555	True	NM_182918,NM_170737,NM_001136155	chr21,chr21,chr21	-,+,-	ERG,KCNJ15,ERG	-736,-226787,-736
chr11:62414784-62415004	chr11	+	62414791	62415049	True	NM_001043229,NM_030628,NM_198335,NM_198334	chr11,chr11,chr11,chr11	+,-,-,-	METTL12,INTS5,GANAB,GANAB	17729,5775,-687,-687
chrX:153670146-153670567	chrX	+	153670241	153670557	True	NM_001009934,NM_004699,NM_001493	chrX,chrX,chrX	-,+,+	DNASE1L1,FAM50A,GDI1	-29814,1927,-5033
chr11:61975708-61976843	chr11	+	61975709	61976650	True	NM_206998,NM_002407	chr11,chr11	-,+	SCGB1D4,SCGB2A1	89937,66
chr16:29467759-29468564	chr16	+	29468047	29468253	True	NM_177552,NR_037608,NR_037609,NM_001017390,NM_001014999,NM_001015000,NM_024044,NM_001031827,NR_002454,NM_001039182,NM_178044	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,+,+,-,+,-,+	SULT1A3,SLX1A-SULT1A3,SLX1B-SULT1A4,SULT1A4,SLX1A,SLX1A,SLX1B,BOLA2,LOC606724,BOLA2B,SLX1B	2953,-1690,-1690,2953,-2280,-2280,-2280,-1762,-7436,-1762,-2280
chr16:29467759-29468564	chr16	+	30207389	30207595	False	NM_177552,NR_037608,NR_037609,NM_001017390,NM_001014999,NM_001015000,NM_024044,NM_001031827,NR_002454,NM_001039182,NM_178044	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,+,+,-,+,-,+	SULT1A3,SLX1A-SULT1A3,SLX1B-SULT1A4,SULT1A4,SLX1A,SLX1A,SLX1B,BOLA2,LOC606724,BOLA2B,SLX1B	2953,-1690,-1690,2953,-2280,-2280,-2280,-1762,-7439,-1762,-2280
chr2:209123777-209125579	chr2	+	209123777	209125579	True	NM_005896,NM_152671,NM_015040,NM_001178000	chr2,chr2,chr2,chr2	-,+,+,+	IDH1,PIKFYVE,PIKFYVE,PIKFYVE	-3971,5411,5411,5411
chr22:21871044-21871294	chr22	+	21871123	21871307	True	NR_003700,NM_003347	chr22,chr22	-,+	PI4KAP2,UBE2L3	523,50649
chr22:21871044-21871294	chr22	+	20427149	20427333	False	NR_003563,NR_026919	chr22,chr22	-,+	PI4KAP1,LOC150197	-28454,-233345
chr22:21871044-21871294	chr22	-	21772155	21772339	False	NM_015094,NR_003700	chr22,chr22	+,-	HIC2,PI4KAP2	-513,99491
chr17:45728219-45728572	chr17	+	45728261	45728623	True	NM_002265,NR_033934	chr17,chr17	+,-	KPNB1,MRPL45P2	-1037,-158275
chr19:41195524-41196192	chr19	+	41195776	41196174	True	NM_025194,NM_004756	chr19,chr19	+,-	ITPKC,NUMBL	26833,432
chr20:34541011-34541601	chr20	+	34541138	34541466	True	NM_033630,NM_080834,NM_016558	chr20,chr20,chr20	-,+,-	SCAND1,C20orf152,SCAND1	1132,15062,1865
chr20:56302390-56303889	chr20	+	56302502	56303878	True	NM_002591,NM_199171	chr20,chr20	+,-	PCK1,PMEPA1	-166416,-15961
chr19:30099385-30100785	chr19	+	30099576	30100524	True	NM_001031726,NR_027368,NM_006627	chr19,chr19,chr19	-,+,+	C19orf12,POP4,POP4	105489,-2457,-2457
chr9:116357622-116358536	chr9	+	116357857	116358310	True	NM_017443,NM_144489	chr9,chr9	-,+	POLE3,RGS3	-184828,-1708
chr1:235668077-235668305	chr1	+	235668093	235668325	True	NM_003193,NM_152490	chr1,chr1	+,-	TBCE,B3GALNT2	-137416,-312
chr9:976201-976632	chr9	+	976208	976278	True	NM_021240,NM_152569	chr9,chr9	+,-	DMRT3,C9orf66	685,-760315
chr8:87126061-87126620	chr8	+	87126087	87126618	True	NM_152565,NM_033126	chr8,chr8	+,-	ATP6V0D2,PSKH2	-15001,-44236
chr13:45492082-45492537	chr13	+	45492125	45492411	True	NM_012345,NM_018559	chr13,chr13	-,+	NUFIP1,KIAA1704	71252,71275
chr16:2266238-2266751	chr16	+	2266661	2266791	True	NM_004424,NM_182563,NM_001042371	chr16,chr16,chr16	+,-,-	E4F1,C16orf79,PGP	6775,-5592,-1839
chr1:160922749-160923240	chr1	+	160922771	160923219	True	NM_080878,NR_033385	chr1,chr1	-,+	ITLN2,KLHDC9	1420,144931
chr16:32687091-32687314	chr16	+	32687090	32687336	True	NM_001205260,NM_016212,NM_001099687,NM_001205259,NM_001205265	chr16,chr16,chr16,chr16,chr16	-,-,-,-,-	LOC653550,TP53TG3,TP53TG3B,LOC653550,TP53TG3B	162,767,162,162,162
chr16:32687091-32687314	chr16	-	32264756	32264994	False	NR_033866,NM_003414	chr16,chr16	-,+	LOC390705,ZNF267	36365,-379728
chr16:32687091-32687314	chr16	-	33205696	33205942	False	NM_001205260,NM_001205265,NM_001205259,NM_001099687,NM_016212,NR_033866	chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,-	LOC653550,TP53TG3B,LOC653550,TP53TG3B,TP53TG3,LOC390705	-162,-162,-162,-162,-767,92810
chr16:32687091-32687314	chr16	-	33262231	33262477	False	NM_001205260,NM_001205265,NM_001205259,NM_001099687,NM_016212,NR_033866	chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,-	LOC653550,TP53TG3B,LOC653550,TP53TG3B,TP53TG3,LOC390705	-162,-162,-162,-162,-767,36275
chr20:16556422-16556833	chr20	+	16556722	16556879	True	NM_001199865,NM_001199866,NM_024704,NM_003092	chr20,chr20,chr20,chr20	-,-,-,+	KIF16B,KIF16B,KIF16B,SNRPB2	-2643,-2643,-2643,153729
chr3:16306858-16308443	chr3	+	16306917	16308477	True	NM_206831,NM_001047434,NM_138381	chr3,chr3,chr3	-,-,+	DPH3,DPH3,OXNAD1	-421,-421,-301
chr15:78424239-78424912	chr15	+	78424319	78424530	True	NM_006383,NM_005530	chr15,chr15	-,+	CIB2,IDH3A	-441,17188
chr6:89791231-89791459	chr6	+	89791265	89791391	True	NM_006813,NM_080743	chr6,chr6	+,-	PNRC1,SRSF12	-887,36459
chr5:95064543-95065650	chr5	+	95064637	95065523	True	NM_031952,NM_014899	chr5,chr5	-,+	SPATA9,RHOBTB3	-45923,1326
chr17:40540504-40540794	chr17	+	40540553	40540771	True	NM_001130020,NM_213662,NM_003150,NM_139276	chr17,chr17,chr17,chr17	+,-,-,-	ATP6V0A1,STAT3,STAT3,STAT3	70090,-148,-40,-40
chr3:11267462-11267719	chr3	+	11267532	11267707	True	NM_001098211,NM_001128221	chr3,chr3	+,-	HRH1,VGLL4	-14,342742
chr19:41697692-41698891	chr19	+	41698105	41698713	True	NM_030622,NM_000660	chr19,chr19	+,-	CYP2S1,TGFB1	401,161168
chr19:5870917-5871858	chr19	+	5871023	5871663	True	NM_002034,NM_001017921	chr19,chr19	-,+	FUT5,VMAC	-472,33188
chr2:73525755-73526716	chr2	+	73525755	73526425	True	NM_001965,NR_029403	chr2,chr2	-,+	EGR4,CCT7	-4926,-64452
chr15:65337551-65337915	chr15	+	65337561	65337903	True	NM_178859,NM_139242	chr15,chr15	+,-	OSTBETA,MTFMT	14,-15584
chr17:75879567-75879921	chr17	+	75879612	75879912	True	NM_001142640,NR_028337	chr17,chr17	+,-	TNRC6C,FLJ45079	120405,307
chr6:14955372-14956488	chr6	+	14955416	14955984	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	290542,707355
chr6:154640861-154641860	chr6	+	154640861	154641827	True	NM_001130699,NM_001145287	chr6,chr6	-,+	IPCEF1,OPRM1	9445,-233270
chr19:21579464-21579916	chr19	+	21579552	21579897	True	NM_175910,NM_145326,NM_001076678,NM_021269	chr19,chr19,chr19,chr19	+,+,+,-	ZNF493,ZNF493,ZNF493,ZNF708	23,23,23,-67340
chr15:83777367-83778431	chr15	+	83777433	83778237	True	NM_001144903,NM_023003,NM_025238	chr15,chr15,chr15	+,+,-	TM6SF1,TM6SF1,BTBD1	-1161,-1161,-41327
chr17:18627584-18628762	chr17	+	18627788	18628780	True	NM_001145045,NM_001037330	chr17,chr17	-,+	ZNF286B,TRIM16L	-42216,-2438
chr17:18627584-18628762	chr17	-	15543738	15543892	False	NM_006382,NM_001130842	chr17,chr17	-,+	CDRT1,ZNF286A	-20720,58998
chr1:16973007-16973321	chr1	+	16973061	16973309	True	NR_027504,NR_026752	chr1,chr1	+,-	MST1P2,CROCCP2	-1043,-15660
chr1:16973007-16973321	chr1	-	17087150	17087382	False	NR_002729,NR_037446	chr1,chr1	-,+	MST1P9,MIR3675	3643,-79451
chr15:74728131-74729238	chr15	+	74728171	74729235	True	NM_001146029,NM_006465,NM_001146030,NM_003612	chr15,chr15,chr15,chr15	-,+,-,-	SEMA7A,ARID3B,SEMA7A,SEMA7A	-1872,104312,-2170,-1872
chr18:11752812-11753653	chr18	+	11752868	11753559	True	NM_023075,NM_001142339,NM_002071	chr18,chr18,chr18	-,+,+	MPPE1,GNAL,GNAL	155139,-1359,-1359
chr1:161558742-161559430	chr1	+	161558790	161559418	True	NM_201563,NM_001127596	chr1,chr1	+,-	FCGR2C,FCGR3A	-7712,-38377
chr1:161558742-161559430	chr1	+	161640620	161641056	False	NM_004001,NM_001002273,NM_001190828,NM_001002274,NM_001002275,NR_002595	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-	FCGR2B,FCGR2B,FCGR2B,FCGR2B,FCGR2B,RPL31P11	-7766,-7766,-7766,-7766,-7766,14036
chr12:122017352-122017623	chr12	+	122017466	122017576	True	NM_032590,NM_032790,NM_001005366	chr12,chr12,chr12	-,+,-	KDM2B,ORAI1,KDM2B	1394,46878,838
chr19:14224423-14224725	chr19	+	14224427	14224595	True	NR_024282,NM_207518,NM_002730	chr19,chr19,chr19	+,-,-	LOC113230,PRKACA,PRKACA	-40657,447,4014
chr14:94392924-94393251	chr14	+	94392933	94393247	True	NM_138344,NR_027004	chr14,chr14	+,-	FAM181A,C14orf86	-7728,-215
chr7:142980499-142981803	chr7	+	142980893	142981837	True	NM_032983,NM_032982,NM_153345,NM_014690	chr7,chr7,chr7,chr7	+,+,+,-	CASP2,CASP2,TMEM139,FAM131B	3470,3470,225,77386
chr19:17354849-17355071	chr19	+	17354946	17355116	True	NM_005234,NM_024578	chr19,chr19	-,+	NR2F6,OCEL1	1085,-17942
chr14:77963959-77964512	chr14	+	77964169	77964457	True	NM_182509,NM_012111,NM_199296	chr14,chr14,chr14	-,+,-	ISM2,AHSA1,ISM2	803,-39847,803
chr22:44393095-44393575	chr22	+	44393112	44393530	True	NM_001003828,NM_138814	chr22,chr22	+,-	PARVB,PNPLA5	1642,-105219
chr4:56213515-56215496	chr4	+	56213813	56215058	True	NR_037969,NM_024592	chr4,chr4	-,+	LOC100506462,SRD5A3	36741,-1476
chr13:100256058-100257824	chr13	+	100256125	100257819	True	NM_004951,NM_206808	chr13,chr13	-,+	GPR183,CLYBL	-296376,1099
chr13:25872034-25873853	chr13	+	25872263	25873682	True	NM_001008564,NM_004685,NM_014089	chr13,chr13,chr13	+,-,+	NUPL1,MTMR6,NUPL1	1983,-10559,1983
chr15:90118345-90118782	chr15	+	90118393	90118663	True	NM_152259,NR_027077	chr15,chr15	+,-	C15orf42,LOC283761	154,-51128
chr20:35234559-35235790	chr20	+	35234755	35235557	True	NM_199483,NM_001199534,NM_032214,NM_018840,NR_026562	chr20,chr20,chr20,chr20,chr20	+,+,-,+,+	C20orf24,C20orf24,SLA2,C20orf24,C20orf24	-669,-669,39051,-669,-669
chr2:166175567-166176397	chr2	+	166175873	166176219	True	NM_006922,NM_001040143	chr2,chr2	-,+	SCN3A,SCN2A	-115296,-23650
chr7:150686785-150687418	chr7	+	150686926	150687388	True	NM_172056,NM_001160110,NM_001160109,NM_000603,NM_001160111	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	KCNH2,NOS3,NOS3,NOS3,NOS3	-11524,3503,3503,755,3503
chr19:16771447-16771651	chr19	+	16771483	16771633	True	NM_024104,NM_024074	chr19,chr19	-,+	C19orf42,TMEM38A	-515,304
chr22:32344924-32345217	chr22	+	32344981	32345065	True	NM_015372,NM_003405	chr22,chr22	-,+	C22orf24,YWHAH	-3645,-4561
chr10:51768990-51769876	chr10	+	51769377	51769457	True	NM_001077665,NM_006327	chr10,chr10	+,-	AGAP6,TIMM23	-21350,-146041
chr11:89952288-89952961	chr11	+	89952455	89952896	True	NM_012124,NM_005467,NM_001144073	chr11,chr11,chr11	-,+,-	CHORDC1,NAALAD2,CHORDC1	3687,-84696,3687
chr11:34460316-34460571	chr11	+	34460322	34460598	True	NM_001752,NM_198381	chr11,chr11	+,-	CAT,ELF5	57,72798
chr1:150228653-150229409	chr1	+	150228782	150229391	True	NM_012113,NM_001077628	chr1,chr1	+,-	CA14,APH1A	826,12192
chr3:37283105-37283663	chr3	+	37283477	37283661	True	NM_002078,NM_017724,NM_001172713	chr3,chr3,chr3	+,-,+	GOLGA4,LRRFIP2,GOLGA4	1020,-65626,1020
chr17:31320865-31322126	chr17	+	31320908	31322072	True	NM_173847,NM_015194	chr17,chr17	+,-	SPACA3,MYO1D	-2077,-117006
chr5:79870561-79872059	chr5	+	79870683	79871833	True	NM_002439,NM_001004441	chr5,chr5	+,-	MSH3,ANKRD34B	78460,-4379
chr10:44102589-44104029	chr10	+	44102641	44103985	True	NM_001099284,NM_145312	chr10,chr10	-,+	ZNF239,ZNF485	-32575,-837
chr1:184356752-184357022	chr1	+	184356882	184357004	True	NM_015101,NM_030806	chr1,chr1	-,+	GLT25D2,C1orf21	-350019,-783
chr5:176935462-176935840	chr5	+	176935567	176935871	True	NM_001144875,NM_001174102,NM_024872,NM_001144876,NM_016222	chr5,chr5,chr5,chr5,chr5	-,+,-,-,-	DOK3,PRR7,DOK3,DOK3,DDX41	1606,-60292,1037,1606,8146
chr19:34921107-34922565	chr19	+	34921334	34922550	True	NR_027620,NM_005499	chr19,chr19	-,+	LOC643719,UBA2	146096,-2125
chr1:111021783-111022080	chr1	+	111021935	111022091	True	NM_005549,NR_003599	chr1,chr1	-,+	KCNA10,CYMP	39756,1296
chr22:31886186-31886550	chr22	+	31886210	31886586	True	NM_001164501,NM_014775,NM_001007467,NM_001164502,NM_019843	chr22,chr22,chr22,chr22,chr22	-,+,+,-,-	EIF4ENIF1,SFI1,SFI1,EIF4ENIF1,EIF4ENIF1	-663,5674,5674,-336,-336
chr19:29380669-29380931	chr19	+	29380673	29380869	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	75168,323317
chr3:192129050-192129742	chr3	+	192129100	192129711	True	NM_020386,NM_021032	chr3,chr3	+,-	HRASLS,FGF12	829206,-2262
chr22:20610243-20610883	chr22	+	20610488	20610804	True	NM_015672,NM_003426	chr22,chr22	-,+	RIMBP3,ZNF74	-148702,137675
chr22:20610243-20610883	chr22	+	25019093	25019267	False	NM_207644,NR_024494	chr22,chr22	-,+	C22orf36,BCRP3	-30058,9614
chr22:20610243-20610883	chr22	-	18766716	18766908	False	NM_005675,NR_003267	chr22,chr22	+,-	DGCR6,GGT3P	126827,12616
chr22:20610243-20610883	chr22	-	21567827	21568143	False	NR_024583,NR_002829	chr22,chr22	+,-	POM121L8P,P2RX6P	68570,-169289
chr3:182879778-182880078	chr3	+	182879784	182880110	True	NM_032047,NM_014398	chr3,chr3	+,-	B3GNT5,LAMP3	90921,607
chr12:120631265-120632147	chr12	+	120631459	120632094	True	NM_053275,NM_012240,NM_001002,NM_006836	chr12,chr12,chr12,chr12	-,+,-,-	RPLP0,SIRT4,RPLP0,GCN1L1	6971,108029,6971,470
chr1:16840078-16840704	chr1	+	16840465	16840551	True	NR_023386,NR_037446	chr1,chr1	-,+	CROCCP3,MIR3675	-21269,34857
chr20:44170017-44171290	chr20	+	44170093	44171043	True	NM_020398,NM_080827,NM_006103,NM_001198986	chr20,chr20,chr20,chr20	-,-,+,-	SPINLW1,WFDC6,WFDC2,SPINLW1-WFDC6	5072,-1959,-71751,5072
chr9:1051908-1052116	chr9	+	1051949	1052075	True	NM_181872,NM_001130865,NM_152569,NM_006557	chr9,chr9,chr9,chr9	+,+,-,+	DMRT2,DMRT2,C9orf66,DMRT2	-1380,-1646,-836056,-1654
chr4:111438254-111438796	chr4	+	111438385	111438741	True	NM_000325,NM_001977	chr4,chr4	-,+	PITX2,ENPEP	105572,-41207
chr2:201634151-201635752	chr2	+	201634221	201635678	True	NM_014670,NR_037886	chr2,chr2	+,-	BZW1,LOC100507140	40968,-34321
chr12:30849046-30849755	chr12	+	30849073	30849723	True	NM_006390,NM_001080509	chr12,chr12	-,+	IPO8,TSPAN11	-144,230114
chr22:38437489-38438204	chr22	+	38437492	38437613	True	NM_013356,NM_001039583	chr22,chr22	-,+	SLC16A8,PICK1	41610,15648
chr10:48831045-48831636	chr10	+	48831100	48831617	True	NM_015605,NM_001042390,NM_001042360,NM_153034,NM_001042361,NM_001042391,NM_001042387,NM_001042393,NM_001042392,NM_001042395,NM_001042394,NM_001042397,NM_001042396,NM_001042364,NM_001042365,NM_001042359,NM_001042358,NM_001042362,NM_001042363	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,+,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-	PTPN20B,PTPN20A,PTPN20B,ZNF488,PTPN20B,PTPN20A,PTPN20A,PTPN20A,PTPN20A,PTPN20A,PTPN20A,PTPN20A,PTPN20A,PTPN20B,PTPN20B,PTPN20B,PTPN20B,PTPN20B,PTPN20B	-3176,-3519,-3519,-476062,-3519,-3519,-3176,-3519,-3519,-3176,-3519,-3176,-3176,-3176,-3176,-3519,-3519,-3519,-3176
chr10:48831045-48831636	chr10	+	46644179	46644696	False	NM_015605,NM_001042390,NM_001042360,NR_027632,NM_001042361,NM_001042391,NM_001042387,NM_001042393,NM_001042392,NM_001042395,NM_001042394,NM_001042397,NM_001042396,NM_001042364,NM_001042365,NM_001042359,NM_001042358,NM_001042362,NM_001042363	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,+,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-	PTPN20B,PTPN20A,PTPN20B,FAM35B,PTPN20B,PTPN20A,PTPN20A,PTPN20A,PTPN20A,PTPN20A,PTPN20A,PTPN20A,PTPN20A,PTPN20B,PTPN20B,PTPN20B,PTPN20B,PTPN20B,PTPN20B	-3176,-3519,-3519,252944,-3519,-3519,-3176,-3519,-3519,-3176,-3519,-3176,-3176,-3176,-3176,-3519,-3519,-3519,-3176
chr10:48831045-48831636	chr10	+	49351625	49352142	False	NR_033172,NM_002750	chr10,chr10	-,+	FRMPD2P1,MAPK8	31155,257544
chr17:7141738-7141947	chr17	+	7141765	7141931	True	NM_203415,NM_004422,NM_007278,NM_024297	chr17,chr17,chr17,chr17	+,-,-,-	C17orf81,DVL2,GABARAP,PHF23	13440,-3902,3872,944
chr17:7535018-7536017	chr17	+	7535039	7535984	True	NM_001040,NM_133491,NM_001146279,NM_001146280,NM_001146281,NR_027462	chr17,chr17,chr17,chr17,chr17,chr17	+,-,+,+,+,+	SHBG,SAT2,SHBG,SHBG,SHBG,SHBG	-1637,-3845,-1637,-1637,-1637,-3803
chr8:353600-354518	chr8	+	353617	354562	True	NM_175075,NM_183420,NM_183421,NM_012173	chr8,chr8,chr8,chr8	-,+,+,+	C8orf42,FBXO25,FBXO25,FBXO25	140819,2245,2245,2245
chr2:215886421-215887741	chr2	+	215886672	215887662	True	NM_004044,NM_015657	chr2,chr2	+,-	ATIC,ABCA12	289016,9199
chr22:38034568-38035107	chr22	+	38034568	38035118	True	NM_006498,NM_018957	chr22,chr22	-,+	LGALS2,SH3BP1	-58544,565
chr8:123794333-123794682	chr8	+	123794378	123794600	True	NM_014943,NM_001134671	chr8,chr8	+,-	ZHX2,DERL1	-528,260098
chr3:194987145-194989014	chr3	+	194987306	194988524	True	NR_003265,NM_152531	chr3,chr3	+,-	SDHAP2,C3orf21	396385,3421
chr15:25442168-25442569	chr15	+	25442369	25442515	True	NR_003344,NR_003358,NR_003313,NR_003312,NR_003311,NR_003310,NM_130838,NR_003297,NR_003308,NR_003309,NR_003351,NR_003301,NR_003302,NR_003303,NR_003304,NR_003305,NR_003306,NR_003307	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,-,+,+,+,+,+,+,+,+,+,+,+	SNORD115-29,SNORD115-43,SNORD115-21,SNORD115-20,SNORD115-19,SNORD115-18,UBE3A,SNORD115-5,SNORD115-16,SNORD115-17,SNORD115-36,SNORD115-9,SNORD115-10,SNORD115-11,SNORD115-12,SNORD115-13,SNORD115-14,SNORD115-15	-7859,-7859,8893,8893,3954,3954,208188,-5854,2079,3954,-7859,-5857,-5857,-7859,-5857,-3952,-2352,8893
chr4:69875368-69876092	chr4_ctg9_hap1	+	587830	588130	False	NM_001075	chr4_ctg9_hap1	-	UGT2B10	-68
chr4:69875368-69876092	chr4	+	69875579	69875879	True	NM_001075,NM_001074	chr4,chr4	-,+	UGT2B10,UGT2B7	10288,86313
chr14:74356791-74357049	chr14	+	74356813	74356878	True	NM_152445,NM_021188	chr14,chr14	-,+	FAM161B,ZNF410	60012,-3285
chr6:14771568-14771980	chr6	+	14771712	14771982	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	474544,891357
chr19:4903415-4904162	chr19	+	4903800	4903988	True	NM_001080523,NM_001048201,NM_013282	chr19,chr19,chr19	-,+,+	ARRDC5,UHRF1,UHRF1	-921,5521,6577
chr1:71511891-71512477	chr1	+	71511992	71512340	True	NR_028294,NR_028293,NR_028292,NM_001126044,NM_153742,NM_198719,NM_198718,NM_198715,NM_198714,NM_198717,NM_198716	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,+,-,-,-,-,-,-	PTGER3,PTGER3,PTGER3,PTGER3,CTH,PTGER3,PTGER3,PTGER3,PTGER3,PTGER3,PTGER3	1201,1201,1201,1201,-635156,1201,1201,1201,1201,1201,1201
chr1:154910693-154911462	chr1	+	154910744	154911359	True	NM_001826,NM_006556	chr1,chr1	+,-	CKS1B,PMVK	35758,-1260
chr11:9684754-9685573	chr11	+	9684932	9685464	True	NR_033972,NM_015055	chr11,chr11	-,+	LOC440028,SWAP70	95666,163
chr19:40196284-40197037	chr19	+	40196495	40197085	True	NM_020129,NM_203471,NM_001828	chr19,chr19,chr19	+,+,-	LGALS14,LGALS14,CLC	-1607,-1607,31633
chr12:58208211-58208826	chr12	+	58208252	58208685	True	NR_029847,NM_001172697,NM_006576	chr12,chr12,chr12	-,+,-	MIR26A2,TSFM,AVIL	9849,-31775,1226
chr19:47215997-47216434	chr19	+	47216063	47216159	True	NM_001079882,NM_001039885,NM_001079880,NM_001079881,NM_016457,NR_036157	chr19,chr19,chr19,chr19,chr19,chr19	-,+,-,-,-,-	PRKD2,FKRP,PRKD2,PRKD2,PRKD2,MIR320E	1468,33143,4275,4275,4275,-3461
chr20:42186798-42187630	chr20	+	42187072	42187580	True	NM_016276,NM_001199264,NM_001008901,NM_170693	chr20,chr20,chr20,chr20	+,+,-,+	SGK2,SGK2,GTSF1L,SGK2	7156,6174,168112,54
chr1:90048810-90049858	chr1	+	90049045	90049801	True	NM_015350,NR_033981	chr1,chr1	+,-	LRRC8B,FLJ27354	-24836,48702
chr1:155146401-155146670	chr1	+	155146458	155146701	True	NM_025058,NM_173852	chr1,chr1	+,-	TRIM46,KRTCAP2	-149,-654
chr7:108154701-108155242	chr7	+	108154700	108155155	True	NM_015723,NM_012328	chr7,chr7	-,+	PNPLA8,DNAJB9	11533,55033
chr11:48378392-48379220	chr11	+	48378392	48378775	True	NM_001004702,NM_001005513	chr11,chr11	+,-	OR4C3,OR4C45	-31958,-4393
chr14:62161859-62162125	chr14	+	62161928	62162094	True	NM_001530,NM_001017970,NM_181054	chr14,chr14,chr14	+,-,+	HIF1A,TMEM30B,HIF1A	24,-413398,24
chr19:10427985-10428322	chr19	+	10427984	10428179	True	NM_001031734,NM_001103167,NM_003259	chr19,chr19,chr19	-,-,+	FDX1L,ZGLP1,ICAM5	-1293,-7751,-27387
chr18:10696481-10696861	chr18	+	10696500	10696894	True	NM_003826,NM_022068	chr18,chr18	+,-	NAPG,FAM38B	-170678,451917
chr3:13593333-13593890	chr3	+	13593572	13593931	True	NM_001004019,NM_001998,NM_024923	chr3,chr3,chr3	+,+,-	FBLN2,FBLN2,NUP210	-2998,-2998,-131763
chr3:189839355-189840997	chr3	+	189839527	189841002	True	NM_001134418,NM_006580,NM_018192	chr3,chr3,chr3	-,+,-	LEPREL1,CLDN16,LEPREL1	-63,264658,-619
chr17:72323040-72323502	chr17	+	72323182	72323503	True	NM_153209,NM_001080466	chr17,chr17	+,-	KIF19,BTBD17	-882,34506
chr14:57856008-57856395	chr14	+	57856039	57856384	True	NM_018168,NM_001011713	chr14,chr14	-,+	C14orf105,NAA30	104243,886
chr17:44925237-44926278	chr17	+	44925271	44926127	True	NM_003396,NM_030753	chr17,chr17	+,-	WNT9B,WNT3	2840,-29189
chr2:152576247-152577865	chr2	+	152576439	152577834	True	NM_001164507,NM_001177665	chr2,chr2	-,+	NEB,RIF1	13225,-309892
chr1:16180589-16181269	chr1	+	16180624	16181322	True	NR_024279,NM_015001	chr1,chr1	-,+	FLJ37453,SPEN	-5982,-6325
chr4:41984180-41984390	chr4	+	41984196	41984426	True	NM_006345,NM_001159547,NM_001029955	chr4,chr4,chr4	+,-,+	SLC30A9,BEND4,DCAF4L1	8096,170519,-534
chr19:45351017-45351249	chr19	+	45351020	45351298	True	NM_001042724,NM_145288,NM_002856	chr19,chr19,chr19	+,-,+	PVRL2,ZNF296,PVRL2	-1678,228440,-1678
chr5:179238087-179238895	chr5	+	179238238	179238848	True	NM_001142299,NM_001142298,NM_014275,NM_054013,NM_003900	chr5,chr5,chr5,chr5,chr5	+,+,-,-,+	SQSTM1,SQSTM1,MGAT4B,MGAT4B,SQSTM1	-4286,-4901,-4286,-8363,8993
chr3:138079139-138080261	chr3	+	138079177	138080259	True	NM_001085049,NM_178130	chr3,chr3	+,-	MRAS,TXNDC6	-11720,-30449
chr3:138665897-138666105	chr3	+	138665897	138666091	True	NM_001040061,NM_023067	chr3,chr3	+,-	C3orf72,FOXL2	-12,9
chr5:140079379-140080921	chr5	+	140079552	140080920	True	NM_012208,NR_026703,NM_002109,NM_144723	chr5,chr5,chr5,chr5	+,+,-,+	HARS2,VTRNA1-1,HARS,ZMAT2	-8585,9940,-8581,-13
chr1:223567485-223567722	chr1	+	223567510	223567720	True	NM_152610,NM_001037175	chr1,chr1	+,-	C1orf65,SUSD4	-846,-29966
chr11:63656340-63657019	chr11	+	63656375	63657059	True	NM_017490,NM_173587	chr11,chr11	+,-	MARK2,RCOR2	-439,27307
chr11:118071312-118071738	chr11	+	118071454	118071777	True	NM_153206,NM_000733	chr11,chr11	-,+	AMICA1,CD3E	12347,103517
chr15:40642047-40642595	chr15	+	40642432	40642580	True	NM_207380,NM_001145643,NM_033510	chr15,chr15,chr15	-,+,+	C15orf52,PHGR1,DISP2	-9264,653,7853
chr3:184056634-184056867	chr3	+	184056660	184056870	True	NM_144635,NM_001171087,NM_001171093	chr3,chr3,chr3	+,-,+	FAM131A,CLCN2,FAM131A	-1435,22571,-2994
chr1:160001847-160002082	chr1	+	160001846	160002096	True	NM_145167,NM_004983	chr1,chr1	-,+	PIGM,KCNJ9	-63,49263
chr15:52384597-52385924	chr15	+	52384827	52385932	True	NM_002748,NM_020396	chr15,chr15	+,-	MAPK6,BCL2L10	-73469,19090
chr4:8454942-8455149	chr4	+	8454988	8455090	True	NM_152544,NM_003501	chr4,chr4	+,-	METTL19,ACOX3	-12509,-12536
chr15:69453859-69454085	chr15	+	69453989	69454069	True	NM_006305,NM_015554	chr15,chr15	-,+	ANP32A,GLCE	-340728,-1074
chr7:6543595-6543801	chr7	+	6543660	6543850	True	NM_006854,NM_001134387	chr7,chr7	-,+	KDELR2,ZDHHC4	-19811,73214
chr3:42726080-42726638	chr3	+	42726125	42726611	True	NM_152393,NR_027753	chr3,chr3	+,-	KBTBD5,HHATL	399,16452
chr1:25739507-25739992	chr1	+	25739580	25739966	True	NM_020485,NM_138618,NM_138616,NM_138617,NM_018202	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	RHCE,RHCE,RHCE,RHCE,TMEM57	7447,7447,7447,7447,17421
chr1:25739507-25739992	chr1	-	25606358	25606684	False	NM_001127691,NM_020317,NM_016124	chr1,chr1,chr1	+,-,+	RHD,C1orf63,RHD	-7428,-32373,-7428
chr1:160814687-160816338	chr1	+	160814786	160816191	True	NM_002348,NM_001166663	chr1,chr1	+,-	LY9,CD244	-48909,16553
chr22:31606974-31607921	chr22	+	31607164	31607968	True	NR_037496,NM_005569	chr22,chr22	-,+	MIR3928,LIMK2	-51059,281
chr1:26645159-26645519	chr1	+	26645158	26645280	True	NM_145345,NM_001803	chr1,chr1	-,+	UBXN11,CD52	-402,-798
chr8:39694695-39694996	chr8	+	39694695	39694839	True	NM_001464,NM_002164	chr8,chr8	-,+	ADAM2,IDO1	1004,76488
chr6:160147514-160148068	chr6	+	160147514	160148000	True	NM_004906,NM_000636,NM_152857,NM_152858	chr6,chr6,chr6,chr6	+,-,+,+	WTAP,SOD2,WTAP,WTAP	151,-33161,619,151
chr16:27416971-27417280	chr16	+	27417070	27417150	True	NM_181078,NM_181079,NR_037158	chr16,chr16,chr16	+,+,-	IL21R,IL21R,LOC283888	-3638,-3638,47614
chrX:153524493-153525496	chrX	+	153524509	153525552	True	NM_001205201,NM_001145934,NM_001145933,NM_012253,NM_001586	chrX,chrX,chrX,chrX,chrX	-,+,+,+,-	TEX28,TKTL1,TKTL1,TKTL1,TEX28	-945,7856,-533,-533,-1055
chr4:73922254-73923065	chr4	+	73922256	73922561	True	NM_000477,NM_173827	chr4,chr4	+,-	ALB,COX18	347410,12968
chr6:161066484-161066901	chr6	+	161066495	161066837	True	NM_001168338,NM_005577	chr6,chr6	+,-	PLG,LPA	56387,20620
chr6:161066484-161066901	chr6	+	161060948	161061290	False	NM_001168338,NM_005577	chr6,chr6	+,-	PLG,LPA	61934,26167
chr6:161066484-161066901	chr6	+	161038765	161039107	False	NM_001168338,NM_005577	chr6,chr6	+,-	PLG,LPA	84117,48350
chr6:161066484-161066901	chr6	+	161044311	161044653	False	NM_001168338,NM_005577	chr6,chr6	+,-	PLG,LPA	78571,42804
chr6:161066484-161066901	chr6	+	161049855	161050197	False	NM_001168338,NM_005577	chr6,chr6	+,-	PLG,LPA	73027,37260
chr14:24424399-24425010	chr14	+	24424520	24425064	True	NR_023924,NR_023922,NR_023923,NM_021004,NR_023921	chr14,chr14,chr14,chr14,chr14	-,-,-,+,-	C14orf167,C14orf167,C14orf167,DHRS4,C14orf167	-1128,-222,-1128,-1619,-1128
chr14:24424399-24425010	chr14	+	24459667	24459839	False	NR_023922,NM_198083	chr14,chr14	-,+	C14orf167,DHRS4L2	-35369,-1704
chr2:33746331-33746768	chr2	+	33746331	33746799	True	NM_015376,NM_015475	chr2,chr2	+,-	RASGRP3,FAM98A	-7440,77615
chr19:58789481-58789931	chr19	+	58789637	58789931	True	NM_021089,NM_130786	chr19,chr19	+,-	ZNF8,A1BG	386,74984
chr10:48953391-48953605	chr10	+	48953460	48953630	True	NR_026566,NM_153034,NR_003611	chr10,chr10,chr10	-,+,-	BMS1P1,ZNF488,BMS1P5	-831,-598422,-831
chr10:48953391-48953605	chr10	-	48184698	48184868	False	NM_002900,NR_024495	chr10,chr10	-,+	RBP3,LOC642826	206173,987
chr10:48953391-48953605	chr10	+	46763723	46763893	False	NR_027632,NR_026566,NR_003611	chr10,chr10,chr10	+,-,-	FAM35B,BMS1P1,BMS1P5	133747,-831,-831
chr10:48953391-48953605	chr10	+	47244488	47244658	False	NR_027634,NR_024495	chr10,chr10	+,-	FAM35B2,LOC642826	135061,-994
chr1:15850836-15851272	chr1	+	15851147	15851209	True	NM_015291,NM_032996,NM_001229	chr1,chr1,chr1	+,-,-	DNAJC16,CASP9,CASP9	2142,126,-207
chr8:143857205-143857490	chr8	+	143857242	143857480	True	NM_177477,NM_177476,NM_177457,NM_016647,NM_177458,NM_023946	chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,+,-,-	LYNX1,LYNX1,LYNX1,C8orf55,LYNX1,LYNX1	1314,1007,2210,-48672,-5996,2209
chr1:26669343-26670330	chr1	+	26669355	26670129	True	NM_001039775,NM_001803	chr1,chr1	-,+	AIM1L,CD52	10542,-24995
chr15:65357706-65357970	chr15	+	65357712	65357958	True	NM_016563,NM_001101362	chr15,chr15	-,+	RASL12,KBTBD13	2480,11195
chr16:49316619-49317017	chr16	+	49316758	49316940	True	NM_144602,NM_004352	chr16,chr16	+,-	C16orf78,CBLN1	90867,-1016
chr6:3445180-3445727	chr6	+	3445295	3445775	True	NM_021945,NM_001128592	chr6,chr6	-,+	SLC22A23,PSMG4	-77,-186184
chr3:195885165-195885789	chr3	+	195885339	195885709	True	NR_034088,NM_001039617	chr3,chr3	+,-	LOC401109,ZDHHC19	-15890,52641
chr4:178362848-178363284	chr4	+	178362874	178363133	True	NR_033655,NM_000027,NM_018248,NM_001171988	chr4,chr4,chr4,chr4	-,-,+,-	AGA,AGA,NEIL3,AGA	575,575,-131935,575
chr16:23309816-23310471	chr16	+	23309834	23310262	True	NM_020718,NM_000336	chr16,chr16	-,+	USP31,SCNN1B	-149243,3328
chr6:90120252-90120890	chr6	+	90120308	90120844	True	NM_021244,NM_014942	chr6,chr6	-,+	RRAGD,ANKRD6	1201,22052
chr19:1437997-1438310	chr19	+	1438033	1438323	True	NM_138924,NM_001018	chr19,chr19	-,+	GAMT,RPS15	-36481,39
chr1:207990671-207991969	chr1	+	207990875	207991974	True	NR_029518,NR_026817	chr1,chr1	-,+	MIR29B2,LOC148696	-15007,-71
chr4:54418918-54420136	chr4	+	54419035	54420000	True	NM_032622,NM_030917	chr4,chr4	-,+	LNX1,FIP1L1	4486,-175267
chr1:110752293-110752605	chr1	+	110752361	110752573	True	NR_036437,NM_001039574,NR_036595,NM_004978	chr1,chr1,chr1,chr1	+,+,-,+	KCNC4,KCNC4,LOC440600,KCNC4	762,762,129270,762
chr3:47848026-47848417	chr3	+	47848370	47848437	True	NM_003074,NM_014966,NM_138615	chr3,chr3,chr3	-,+,+	SMARCC1,DHX30,DHX30	-24965,-4022,-4022
chr21:33678090-33678451	chr21	+	33678105	33678431	True	NM_206898,NM_018944	chr21,chr21	+,-	MRAP,MIS18A	-14032,-26729
chr12:57031007-57032602	chr12	+	57031008	57032285	True	NR_003046,NM_001686,NM_002898,NM_013449,NR_002737	chr12,chr12,chr12,chr12,chr12	-,-,+,-,-	SNORD59B,ATP5B,RBMS2,BAZ2A,SNORD59A	5305,7619,-115455,-845,6652
chr18:75697593-75697924	chr18	+	75697622	75697902	True	NM_001480,NM_001025100	chr18,chr18	+,-	GALR1,MBP	-735665,-852848
chr14:95267232-95267451	chr14	+	95267231	95267469	True	NR_015340,NM_173849	chr14,chr14	+,-	SERPINA13,GSC	-160220,-30732
chr7:135350978-135351255	chr7	+	135350977	135351099	True	NM_001130929,NM_012450	chr7,chr7	+,-	PL-5283,SLC13A4	-3807,61892
chr12:79943021-79944472	chr12	+	79943153	79944472	True	NR_031700,NM_002583	chr12,chr12	+,-	MIR1252,PAWR	-130167,140369
chr2:6643940-6645370	chr2	+	6644107	6645233	True	NM_207315,NM_080657	chr2,chr2	-,+	CMPK2,RSAD2	360754,372562
chr11:73309890-73310451	chr11	+	73309908	73310281	True	NM_001130033,NM_015159	chr11,chr11	+,-	PLEKHB1,FAM168A	46941,-680
chr1:209979215-209979522	chr1	+	209979273	209979391	True	NM_006147,NM_014388	chr1,chr1	-,+	IRF6,DIEXF	138,21920
chr4:75859392-75859890	chr4	+	75859442	75859830	True	NM_001729,NM_015393	chr4,chr4	-,+	BTC,PARM1	-139560,-1208
chr1:149192796-149193444	chr1	+	149192900	149193481	True	NM_001024599,NR_027002	chr1,chr1	-,+	HIST2H2BF,LOC388692	205799,85994
chr4:7103923-7104193	chr4	+	7103936	7104240	True	NR_027441,NM_152293	chr4,chr4	-,+	FLJ36777,TADA2B	913,-58831
chr11:2019282-2019665	chr11	+	2019582	2019714	True	NR_002196,NR_024471,NR_030533,NM_021134	chr11,chr11,chr11,chr11	-,-,-,+	H19,LOC100133545,MIR675,MRPL23	-517,-8432,-1521,-51131
chr6:121751226-121753184	chr6	+	121751860	121752807	True	NM_000165,NM_152730	chr6,chr6	+,-	GJA1,C6orf170	3937,-96216
chr9:116103492-116104776	chr9	+	116103504	116104427	True	NM_001012361,NM_145241,NM_017688	chr9,chr9,chr9	-,-,+	WDR31,WDR31,BSPRY	-884,-884,7384
chr3:47518983-47520519	chr3	+	47519208	47519838	True	NM_012235,NM_015466	chr3,chr3	-,+	SCAP,PTPN23	-1763,-96768
chr10:104536827-104537480	chr10	+	104536831	104537263	True	NM_000102,NM_017787	chr10,chr10	-,+	CYP17A1,C10orf26	60077,-994
chr2:30103832-30105093	chr2	+	30103912	30105107	True	NM_004304,NM_001127399	chr2,chr2	-,+	ALK,YPEL5	39425,264642
chr17:31208254-31209298	chr17	+	31208369	31209239	True	NM_001033504,NM_015194	chr17,chr17	+,-	TMEM98,MYO1D	45688,-4467
chr17:56832213-56832493	chr17	+	56832371	56832537	True	NM_014906,NM_198393	chr17,chr17	+,-	PPM1E,TEX14	694,-62955
chr6:64324593-64325407	chr6	+	64324832	64325460	True	NM_015153,NM_016571	chr6,chr6	+,-	PHF3,LGSN	30970,-294950
chr11:61520663-61520983	chr11	+	61520863	61521031	True	NR_026882,NM_001127392,NM_013279	chr11,chr11,chr11	-,+,+	DKFZP434K028,C11orf9,C11orf9	4155,-793,1829
chrX:152801391-152801884	chrX	+	152801456	152801724	True	NM_001130997,NM_001001344,NM_021949	chrX,chrX,chrX	-,+,+	FAM58A,ATP2B3,ATP2B3	62958,42,42
chr1:15948546-15949149	chr1	+	15948850	15949151	True	NM_032341,NM_024758	chr1,chr1	+,-	DDI2,AGMAT	-4955,-37245
chr16:55521487-55522373	chr16	+	55521541	55522387	True	NM_001127891,NM_001025194,NM_004530	chr16,chr16,chr16	+,-,+	MMP2,CES1,MMP2	-6118,344738,-8511
chr6:44187593-44188707	chr6	+	44187775	44188276	True	NM_004955,NM_178148,NM_001078174,NM_001078175,NM_001078176,NM_001078177	chr6,chr6,chr6,chr6,chr6,chr6	+,-,+,+,+,+	SLC29A1,SLC35B2,SLC29A1,SLC29A1,SLC29A1,SLC29A1	-584,37066,-584,3019,3019,3086
chr3:49201176-49201938	chr3	+	49201405	49201975	True	NM_173546,NR_004405,NM_022903	chr3,chr3,chr3	+,-,-	KLHDC8B,LAMB2P1,CCDC71	7042,-9571,1860
chr14:21945803-21946354	chr14	+	21945820	21946007	True	NM_032846,NM_001163380,NM_014828,NR_028074	chr14,chr14,chr14,chr14	-,-,+,-	RAB2B,RAB2B,TOX4,RAB2B	-688,-988,-536,-688
chr1:26198496-26199104	chr1	+	26198533	26199005	True	NM_178422,NM_001099626	chr1,chr1	-,+	PAQR7,FAM54B	-789,-51266
chr2:95868985-95870806	chr2	+	95869630	95870474	True	NM_021088,NM_032788	chr2,chr2	+,-	ZNF2,ZNF514	-38498,-44367
chr16:67314803-67315536	chr16	+	67314853	67315553	True	NM_013241,NM_015432,NM_001129728,NM_001129729,NM_001129727,NM_001129731	chr16,chr16,chr16,chr16,chr16,chr16	-,+,+,+,+,+	FHOD1,PLEKHG4,PLEKHG4,PLEKHG4,PLEKHG4,PLEKHG4	-33428,-3491,-1854,-1415,-2828,-1412
chr6:52225450-52226725	chr6	+	52225540	52226735	True	NM_133367,NM_002388	chr6,chr6	+,-	PAQR8,MCM3	190,-75958
chr9:132405696-132405909	chr9	+	132405786	132405894	True	NM_014064,NM_017873,NM_001202403,NM_177999	chr9,chr9,chr9,chr9	+,-,-,-	METTL11A,ASB6,ASB6,ASB6	-17403,-1338,-1338,-1338
chr19:15725920-15726463	chr19	+	15725924	15726358	True	NM_007253,NM_052890	chr19,chr19	+,-	CYP4F8,PGLYRP2	54,-135609
chr1:112939044-112939251	chr1	+	112939067	112939300	True	NM_018704,NR_036210	chr1,chr1	+,-	CTTNBP2NL,MIR4256	-318,65205
chr16:20088468-20089138	chr16	+	20088519	20088880	True	NM_001002911,NM_017888	chr16,chr16	-,+	GPR139,ACSM5	-3419,331975
chr17:34080736-34082191	chr17	+	34080798	34082186	True	NM_145272,NM_139285	chr17,chr17	+,-	C17orf50,GAS2L2	5729,-901
chr17:40119288-40119501	chr17	+	40119328	40119456	True	NM_033133,NM_198830	chr17,chr17	+,-	CNP,ACLY	-620,-44056
chr10:120837387-120839086	chr10	+	120837679	120839098	True	NM_207009,NM_003750	chr10,chr10	+,-	FAM45A,EIF3A	24512,1290
chr1:153584744-153585385	chr1	+	153584853	153585323	True	NM_080388,NM_006271,NM_020672	chr1,chr1,chr1	-,+,-	S100A16,S100A1,S100A14	241,15549,3517
chr9:123479299-123479768	chr9	+	123479376	123479744	True	NR_027442,NM_001080497	chr9,chr9	+,-	LOC100288842,MEGF9	76030,-2611
chr17:44668660-44668932	chr17_ctg5_hap1	-	379673	379975	False	NM_001113738,NR_033799,NM_006178	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	+,-,-	ARL17A,NSFP1,NSF	11607,628,690
chr17:44668660-44668932	chr17_ctg5_hap1	+	1525490	1525792	False	NM_016632	chr17_ctg5_hap1	-	ARL17A	-11606
chr17:44668660-44668932	chr17	+	44668677	44668979	True	NM_001113738,NR_033799,NM_006178	chr17,chr17,chr17	-,+,+	ARL17A,NSFP1,NSF	-11589,-628,-690
chr17:44668660-44668932	chr17	+	44450756	44451058	False	NM_001113738,NR_033799	chr17,chr17	-,+	ARL17A,NSFP1	-11593,-628
chr1:160724209-160724721	chr1	+	160724260	160724730	True	NM_021181,NM_001778	chr1,chr1	+,-	SLAMF7,CD48	-15234,-42675
chr6:17398370-17398914	chr6	+	17398497	17398615	True	NM_006366,NM_005124	chr6,chr6	+,-	CAP2,NUP153	-4816,308253
chr1:22889247-22889722	chr1	+	22889269	22889628	True	NM_020526,NR_036214,NM_001006943	chr1,chr1,chr1	+,-,+	EPHA8,MIR4253,EPHA8	375,300141,375
chr19:829566-829808	chr19	+	829595	829793	True	NM_001700,NM_024888	chr19,chr19	+,-	AZU1,LPPR3	-1815,-7643
chr5:149572476-149573369	chr5	+	149572604	149573402	True	NM_002609,NM_014228	chr5,chr5	-,+	PDGFRB,SLC6A7	-37182,-3135
chr5:157413976-157414268	chr5	+	157414067	157414313	True	NM_014666,NM_173491	chr5,chr5	-,+	CLINT1,LSM11	-127884,-243363
chr5:126112803-126113102	chr5	+	126112891	126113117	True	NM_005573,NM_001198557,NM_001202404	chr5,chr5,chr5	+,+,-	LMNB1,LMNB1,ALDH7A1	-627,-97,-181809
chr10:124189436-124190059	chr10	+	124189558	124190074	True	NM_001010912,NR_037506	chr10,chr10	-,+	C10orf120,MIR3941	269316,-13135
chr9:115983626-115983861	chr9	+	115983628	115983872	True	NM_015258,NM_001859	chr9,chr9	-,+	FKBP15,SLC31A1	7,59
chr14:24807714-24808152	chr14	+	24807739	24808153	True	NM_139247,NM_181657,NM_006871,NM_001198568,NM_001198592	chr14,chr14,chr14,chr14,chr14	-,+,-,-,-	ADCY4,LTB4R,RIPK3,ADCY4,ADCY4	-3462,-25477,1139,-3462,-3462
chr1:160255982-160256342	chr1	+	160255992	160256281	True	NR_036492,NR_002190,NM_002857,NM_001193644,NR_036493	chr1,chr1,chr1,chr1,chr1	-,+,-,-,-	PEX19,SUMO1P3,PEX19,PEX19,PEX19	-1051,30773,-1051,-1051,-1051
chr8:145578139-145578342	chr8	+	145578266	145578360	True	NM_024531,NM_012162,NR_015428,NM_024555	chr8,chr8,chr8,chr8	+,-,-,-	GPR172A,FBXL6,C8ORFK29,FBXL6	3864,3822,195,3822
chr19:16770947-16771447	chr19	+	16770985	16771299	True	NM_024104,NM_024074	chr19,chr19	-,+	C19orf42,TMEM38A	-17,638
chr8:1777563-1777960	chr8	+	1777623	1777907	True	NM_014629,NR_033895	chr8,chr8	+,-	ARHGEF10,LOC286083	-5525,-526796
chr1:154974349-154974755	chr1	+	154974469	154974703	True	NM_015872,NM_018655,NM_003029	chr1,chr1,chr1	+,+,-	ZBTB7B,LENEP,SHC1	408,-8458,-27510
chr4:25375827-25377827	chr4	+	25376034	25377692	True	NM_013367,NM_016955	chr4,chr4	+,-	ANAPC4,SEPSECS	1155,-213830
chr22:21872562-21873243	chr22	+	21872616	21873193	True	NR_003700,NM_003347	chr22,chr22	-,+	PI4KAP2,UBE2L3	-836,48763
chr22:21872562-21873243	chr22	+	20428637	20429214	False	NR_003563,NR_026919	chr22,chr22	-,+	PI4KAP1,LOC150197	-29942,-234833
chr22:21872562-21873243	chr22	-	21770272	21770717	False	NM_015094,NR_003700	chr22,chr22	+,-	HIC2,PI4KAP2	975,101120
chr5:150718418-150719164	chr5	+	150718417	150718849	True	NM_001167607,NM_181776	chr5,chr5	+,-	GM2A,SLC36A2	-85862,8352
chr3:81807396-81808786	chr3	+	81807526	81808774	True	NM_001167674,NM_000158	chr3,chr3	+,-	CADM2,GBE1	3199358,2233
chr20:44353049-44353541	chr20	+	44353168	44353281	True	NM_178455,NM_172131	chr20,chr20	+,-	SPINT4,WFDC10B	-2232,-19510
chr3:44620672-44620959	chr3	+	44620710	44620952	True	NM_173658,NM_181489	chr3,chr3	+,-	ZNF660,ZNF445	5503,-101548
chr9:27281539-27281739	chr9	+	27281548	27281779	True	NR_026679,NR_026687,NM_000459	chr9,chr9,chr9	-,-,+	NCRNA00032,NCRNA00032,TEK	1062,1062,-172452
chr2:86563982-86564207	chr2	+	86563988	86564086	True	NM_018433,NM_001164730,NM_001164731,NM_001164732,NM_022912	chr2,chr2,chr2,chr2,chr2	+,-,-,-,-	KDM3A,REEP1,REEP1,REEP1,REEP1	104184,1170,741,741,741
chr6:155763985-155764418	chr6	+	155764020	155764377	True	NM_015718,NM_001001346	chr6,chr6	-,+	NOX3,CLDN20	12711,-178936
chr8:133685053-133686854	chr8	+	133685057	133686161	True	NM_012472,NM_198513	chr8,chr8	-,+	LRRC6,PHF20L1	1702,101442
chr3:69993641-69994457	chr3	+	69993667	69994471	True	NM_198178,NM_001184968,NM_000248,NM_015123,NM_198158	chr3,chr3,chr3,chr3,chr3	+,+,+,-,+	MITF,MITF,MITF,FRMD4B,MITF	-7977,-7977,-7977,-558237,-7977
chr16:23523224-23524184	chr16	+	23523230	23523997	True	NM_019116,NM_015044	chr16,chr16	+,-	UBFD1,GGA2	44864,-1415
chr9:13168477-13169404	chr9	+	13168479	13169409	True	NM_203403,NM_003829	chr9,chr9	+,-	C9orf150,MPDZ	-393518,81009
chr7:150926494-150927551	chr7	+	150926650	150927548	True	NM_007189,NM_019015,NR_030407,NM_005692	chr7,chr7,chr7,chr7	-,+,+,-	ABCF2,CHPF2,MIR671,ABCF2	-2333,2036,7958,-2333
chrX:119513939-119515396	chrX	+	119514136	119515127	True	NM_017938,NM_012069	chrX,chrX	-,+	FAM70A,ATP1B4	-68745,-18247
chr5:141030181-141030674	chr5	+	141030248	141030669	True	NM_033449,NM_173828	chr5,chr5	-,+	FCHSD1,RELL2	367,-13782
chr2:219134380-219134694	chr2	+	219134681	219134743	True	NM_015488,NM_001077191,NM_001087,NM_170699,NM_001077194,NM_001077399	chr2,chr2,chr2,chr2,chr2,chr2	+,+,-,+,+,+	PNKD,GPBAR1,AAMP,GPBAR1,GPBAR1,PNKD	371,-8994,200,-8994,-8994,371
chr7:5232383-5233337	chr7	+	5232442	5233180	True	NM_016003,NM_015610,NR_034163,NM_001033519,NM_001033518	chr7,chr7,chr7,chr7,chr7	+,+,-,+,+	WIPI2,WIPI2,ZNF890P,WIPI2,WIPI2	-2668,-2668,-48265,-2668,-2668
chr18:13140320-13140774	chr18	+	13140364	13140494	True	NM_002828,NM_181481	chr18,chr18	-,+	PTPN2,C18orf1	-256030,78291
chr19:48824824-48825034	chr19	+	48824917	48825083	True	NM_144577,NM_001425	chr19,chr19	-,+	CCDC114,EMP3	-1585,3545
chr19:15376854-15378473	chr19	+	15377076	15378379	True	NM_033025,NM_058243	chr19,chr19	+,-	SYDE1,BRD4	-158913,12933
chrX:78215469-78216283	chrX	+	78215578	78216281	True	NM_198333,NR_036258	chrX,chrX	+,-	P2RY10,MIR4328	-14808,-58832
chr5:95158121-95158386	chr5	+	95158129	95158387	True	NR_026936,NM_002064,NM_001118890	chr5,chr5,chr5	+,-,-	C5orf27,GLRX,GLRX	29548,240,240
chr18:8362169-8363050	chr18	+	8362196	8363034	True	NM_001025300,NR_024419	chr18,chr18	+,-	RAB12,LOC100192426	246408,4050
chr2:179192850-179193508	chr2	+	179192869	179193553	True	NM_001139518,NM_145739	chr2,chr2	-,+	PRKRA,OSBPL6	121852,-7957
chr7:75543652-75544114	chr7	+	75543652	75544148	True	NM_031925,NM_000941	chr7,chr7	-,+	TMEM120A,POR	79894,271
chr12:52950976-52952785	chr12	+	52951161	52952651	True	NM_033448,NM_002284	chr12,chr12	-,+	KRT71,KRT86	-4230,-255572
chr9:139937998-139938761	chr9	+	139938069	139938801	True	NM_207511,NM_001246,NM_203468,NM_015392	chr9,chr9,chr9,chr9	+,-,-,-	C9orf139,ENTPD2,ENTPD2,NPDC1	-16204,9754,9754,1925
chr1:16013827-16015545	chr1	+	16014062	16015452	True	NM_024758,NM_015164	chr1,chr1	-,+	AGMAT,PLEKHM2	-102457,-3286
chr16:48177959-48179658	chr16	+	48178035	48179546	True	NM_033226,NM_031490	chr16,chr16	-,+	ABCC12,LONP2	1185,98664
chr12:54698957-54699293	chr12	+	54699097	54699157	True	NM_016057,NM_001136023,NM_006163	chr12,chr12,chr12	+,-,-	COPZ1,NFE2,NFE2	19753,-4306,-9553
chr19:3095356-3095599	chr19	+	3095449	3095523	True	NM_002067,NM_198969	chr19,chr19	+,-	GNA11,AES	-1092,-32485
chr17:72588597-72589108	chr17	+	72588655	72589115	True	NM_152460,NM_001115152	chr17,chr17	+,-	C17orf77,CD300LD	-7649,-285
chr4:186987943-186989880	chr4	+	186988115	186989782	True	NM_021069,NM_003265	chr4,chr4	-,+	SORBS2,TLR3	-110245,526
chrX:48542270-48543888	chrX	+	48542324	48543818	True	NM_013271,NM_000377	chrX,chrX	-,+	PCSK1N,WAS	150192,-189
chr1:27218670-27219555	chr1	+	27218783	27219508	True	NM_018066,NM_006142,NM_022078,NM_006600	chr1,chr1,chr1,chr1	-,+,-,+	GPN2,SFN,GPATCH3,NUDC	-1914,-29201,7507,28715
chr14:69262851-69263265	chr14	+	69262960	69263176	True	NM_207442,NM_004926,NM_001193360	chr14,chr14,chr14	-,-,+	C14orf181,ZFP36L1,EXD2	64,-3175,395017
chr16:30365703-30366055	chr16	+	30365754	30366060	True	NM_006110,NM_013292,NR_024465	chr16,chr16,chr16	-,+,-	CD2BP2,MYLPF,CD2BP2	672,20062,245
chr2:120981272-120981568	chr2	+	120981282	120981616	True	NM_002881,NR_000034	chr2,chr2	+,-	RALB,TMEM185B	28797,-298
chr17:58095769-58096041	chr17	+	58095841	58095907	True	NM_003161,NR_002924	chr17,chr17	+,-	RPS6KB1,DHX40P1	-125449,479
chr20:47663092-47663403	chr20	+	47663118	47663388	True	NM_001037328,NM_001316	chr20,chr20	-,+	STAU1,CSE1L	141566,-331
chr12:58005760-58006763	chr12	+	58005834	58006597	True	NM_001111270,NM_182947,NM_001478,NM_178502,NM_133489	chr12,chr12,chr12,chr12,chr12	+,+,-,+,+	ARHGEF25,ARHGEF25,B4GALNT1,DTX3,SLC26A10	-1922,-667,20439,-7281,7095
chr17:57408122-57408544	chr17	+	57408150	57408362	True	NM_182620,NM_001005404	chr17,chr17	-,+	SKA2,YPEL2	-175350,690
chrX:91121112-91122740	chrY	+	4957037	4957094	True	NM_032973,NR_001540	chrY,chrY	+,-	PCDH11Y,TTTY23	-32964,1154614
chr9:112887654-112888910	chr9	+	112887866	112888878	True	NM_001136562,NM_001012993	chr9,chr9	+,-	AKAP2,C9orf152	-136,81585
chr14:51031862-51033009	chr14	+	51032351	51033057	True	NM_181598,NM_015915,NM_198794	chr14,chr14,chr14	+,+,-	ATL1,ATL1,MAP4K5	-5660,-5660,-32975
chr3:160821808-160822507	chr3	+	160821844	160822414	True	NM_001038628,NM_033168,NM_033169,NM_033167,NM_003781,NM_015938	chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,-,+	B3GALNT1,B3GALNT1,B3GALNT1,B3GALNT1,B3GALNT1,NMD3	796,796,319,796,796,116684
chr4:16217745-16219745	chr4	+	16217850	16219678	True	NM_153365,NR_027696,NR_027697	chr4,chr4,chr4	-,+,+	TAPT1,FLJ39653,FLJ39653	8534,8607,8607
chr1:154943511-154944377	chr1	+	154943858	154944270	True	NM_003029,NM_001826,NR_036212,NR_024163,NM_138300,NM_001130041,NM_001130040,NM_183001,NM_001202859	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,+,-,-,-,-,-	SHC1,CKS1B,MIR4258,CKS1B,PYGO2,SHC1,SHC1,SHC1,SHC1	2739,2847,3898,2847,-9600,2739,-635,-635,2739
chr20:17678118-17678565	chr20	+	17678118	17678405	True	NM_001014977,NM_001159495,NM_004587,NM_178477	chr20,chr20,chr20,chr20	+,+,-,+	BANF2,BANF2,RRBP1,BANF2	2187,-3856,-15190,2187
chr16:67874989-67875277	chr16	+	67875150	67875286	True	NM_025082,NM_020457,NM_005796	chr16,chr16,chr16	-,+,+	CENPT,THAP11,NUTF2	6125,926,5532
chr11:67778148-67778411	chr11	+	67778294	67778372	True	NM_001161473,NM_030930,NM_000694,NM_001030010	chr11,chr11,chr11,chr11	+,-,+,+	ALDH3B1,UNC93B1,ALDH3B1,ALDH3B1	-2297,-6701,-555,-555
chr6:27107287-27107660	chr6	+	27107382	27107694	True	NM_021064,NM_003495,NM_080593,NM_080596,NM_021058,NR_036096	chr6,chr6,chr6,chr6,chr6,chr6	+,+,-,+,-,+	HIST1H2AG,HIST1H4I,HIST1H2BK,HIST1H2AH,HIST1H2BJ,MIR3143	-6616,-345,6993,7213,-6807,7710
chr8:9762098-9762685	chr8	+	9762116	9762698	True	NR_024281,NM_001135670,NR_029668	chr8,chr8,chr8	-,+,-	LOC157627,MSRA,MIR124-1	-1277,149131,-1134
chr16:23687577-23689352	chr16	+	23687992	23689109	True	NM_005030,NM_033266,NM_024675	chr16,chr16,chr16	+,-,-	PLK1,ERN2,PALB2	1091,35762,-35314
chr12:127573930-127574366	chr12	+	127574029	127574324	True	NR_033970,NR_015398	chr12,chr12	-,+	LOC440117,LOC100128554	-214793,-647053
chr11:85404749-85406194	chr11	+	85404820	85406207	True	NM_152723,NM_032273	chr11,chr11	-,+	CCDC89,TMEM126A	-7500,-45915
chr18:55251266-55252351	chr18	+	55251602	55252024	True	NM_001012515,NM_004852,NM_000140	chr18,chr18,chr18	-,+,-	FECH,ONECUT2,FECH	2004,-148745,2004
chr3:16926846-16927144	chr3	+	16926869	16927149	True	NM_001144382,NM_001351	chr3,chr3	+,-	PLCL2,DAZL	-468,-279863
chrX:52896964-52897301	chrX	+	52896988	52897278	True	NM_014138,NM_133179,NM_130776	chrX,chrX,chrX	+,-,-	FAM156A,XAGE3,XAGE3	30583,-21,-656
chr12:56392350-56392720	chr12	+	56392415	56392737	True	NM_006928,NM_000456,NM_001032386,NM_001032387	chr12,chr12,chr12,chr12	-,+,+,+	PMEL,SUOX,SUOX,SUOX	-31919,-1423,-1423,-1423
chr20:44335132-44335735	chr20	+	44335563	44335696	True	NM_172005,NM_172006,NM_172131	chr20,chr20,chr20	+,-,-	WFDC13,WFDC10B,WFDC10B	-4965,-1905,-1905
chr2:71696516-71697460	chr2	+	71696527	71697423	True	NM_001130982,NM_001130983,NM_001130986,NM_001130455,NM_001130984,NM_001130985,NM_020459,NM_001130987	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,+,+,-,+	DYSF,DYSF,DYSF,DYSF,DYSF,DYSF,PAIP2B,DYSF	-2748,-2748,-2748,-2748,-2748,-2748,-242294,-2748
chr16:14789453-14790329	chr16	+	14789676	14790021	True	NM_003561,NM_016561	chr16,chr16	-,+	PLA2G10,BFAR	-1150,-63066
chr16:14789453-14790329	chr16	+	14828794	14829139	False	NM_003561,NM_014287	chr16,chr16	-,+	PLA2G10,NOMO1	-40268,98503
chr8:42548891-42549174	chr8	+	42549130	42549192	True	NM_001199279,NM_000749	chr8,chr8	-,+	CHRNA6,CHRNB3	74787,3369
chr17:3795098-3795434	chr17	+	3795178	3795450	True	NM_172207,NM_172206,NM_032294,NM_031965	chr17,chr17,chr17,chr17	-,-,-,+	CAMKK1,CAMKK1,CAMKK1,GSG2	937,-1141,937,-168032
chrX:112054366-112056346	chrX	+	112054488	112056376	True	NM_001004308,NM_001113490	chrX,chrX	+,-	ZCCHC16,AMOT	-728286,10028
chr3:37497914-37499408	chr3	+	37498124	37499400	True	NM_002207,NM_017724	chr3,chr3	+,-	ITGA9,LRRFIP2	-4362,-280273
chr1:3767817-3768905	chr1	+	3768010	3768954	True	NM_004402,NM_014704	chr1,chr1	+,-	DFFB,KIAA0562	4890,4893
chr11:67212863-67213425	chr11	+	67212877	67213473	True	NM_020441,NM_145200,NM_206997,NM_001018070,NM_005608	chr11,chr11,chr11,chr11,chr11	-,+,-,-,-	CORO1B,CABP4,GPR152,CORO1B,PTPRCAP	-1894,9344,6777,-1614,-7724
chr4:13484815-13485266	chr4	+	13484878	13485252	True	NM_004249,NM_001017979,NM_001159601,NR_003132	chr4,chr4,chr4,chr4	-,-,-,+	RAB28,RAB28,RAB28,HSP90AB2P	787,787,787,-149892
chr12:58022027-58022924	chr12	+	58022204	58022902	True	NM_001478,NM_133489	chr12,chr12	-,+	B4GALNT1,SLC26A10	4133,-8569
chr2:26203188-26203571	chr2	+	26203238	26203442	True	NM_002254,NM_016131	chr2,chr2	-,+	KIF3C,RAB10	2051,53286
chr8:71582193-71583307	chr8	+	71582245	71583140	True	NM_016027,NM_001011720	chr8,chr8	-,+	LACTB2,XKR9	-798,-702
chr19:21931996-21933470	chr19	+	21932144	21933033	True	NR_024523,NM_173531	chr19,chr19	+,-	LOC641367,ZNF100	513,17456
chr22:50246676-50246891	chr22	+	50246701	50246873	True	NM_014838,NM_014577	chr22,chr22	+,-	ZBED4,BRD1	623,-28249
chr16:3209323-3210001	chr16	+	3209340	3210013	True	NR_024167,NM_001134655	chr16,chr16	-,+	MGC3771,ZNF213	-43741,-24258
chr6:22569243-22569541	chr6	+	22569249	22569535	True	NM_001163558,NM_138574	chr6,chr6	-,+	PRL,HDGFL1	-266167,142
chr14:20929994-20931429	chr14	+	20930050	20931288	True	NM_001641,NM_000270,NM_017807,NM_001100814,NM_080649,NM_080648,NM_144568	chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,+,-,-,+,+,-	APEX1,PNP,OSGEP,TMEM55B,APEX1,APEX1,TMEM55B	-6811,6249,-6783,-413,-6811,-6811,-413
chr10:105833962-105834288	chr10	+	105834004	105834320	True	NM_145247,NM_000494	chr10,chr10	+,-	MEIR5,COL17A1	47495,11368
chr20:45033153-45034139	chr20	+	45033154	45033882	True	NM_152854,NM_133171,NM_182764	chr20,chr20,chr20	+,-,-	CD40,ELMO2,ELMO2	-286299,1440,1440
chr21:19191420-19191622	chr21	+	19191453	19191671	True	NM_001204175,NM_001100420,NM_001100421,NM_017447	chr21,chr21,chr21,chr21	+,-,-,-	CHODL,C21orf91,C21orf91,C21orf91	97985,82,82,82
chr15:101402139-101402713	chr15	+	101402287	101402521	True	NM_001040616,NM_000693	chr15,chr15	-,+	LINS,ALDH1A3	-259842,17487
chr1:32861303-32862009	chr1	+	32861507	32861725	True	NM_052841,NM_001143890,NM_018045,NM_001143889,NM_001143888	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	TSSK3,BSDC1,BSDC1,BSDC1,BSDC1	-33696,-1445,-1445,-1445,-1445
chr14:39644571-39644823	chr14	+	39644573	39644867	True	NM_001079537,NM_177452,NM_002687	chr14,chr14,chr14	-,-,+	TRAPPC6B,TRAPPC6B,PNN	-4939,-4939,-237
chr7:29228414-29230200	chr7	+	29228475	29230203	True	NM_004067,NM_031311	chr7,chr7	+,-	CHN2,CPVL	3917,-42322
chr12:83077739-83079679	chr12	+	83077874	83079583	True	NM_152588,NR_033192	chr12,chr12	+,-	TMTC2,CCDC59	1350,-325290
chr19:7812566-7814463	chr19	+	7812625	7814074	True	NM_021155,NM_001144893,NM_001144897,NM_001144896,NM_001144895,NM_001144894,NR_026692,NM_001144899,NM_001144904	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,-,+	CD209,CD209,CD209,CD209,CD209,CD209,CD209,CD209,CLEC4M	-161,-161,-161,-161,-161,-161,-161,-161,13960
chr19:46406177-46406457	chr19	+	46406197	46406341	True	NM_004497,NM_001012643	chr19,chr19	+,-	FOXA3,MYPOP	-38730,-335
chr6:135503775-135503984	chr6	+	135503775	135503891	True	NM_001161658,NM_001161659,NM_001161660,NM_001130173,NM_001130172,NM_001161656,NM_001161657,NM_001145207,NM_005375	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	+,+,+,+,+,+,+,-,+	MYB,MYB,MYB,MYB,MYB,MYB,MYB,HBS1L,MYB	-1373,-1373,-1373,-1373,-1373,-1373,-1373,-127739,-1373
chr4:78430478-78431823	chr4	+	78430477	78431651	True	NM_144571,NM_006419	chr4,chr4	-,+	CNOT6L,CXCL13	308943,1255
chr13:25538889-25540128	chr13	+	25538888	25540172	True	NR_026730,NM_030979	chr13,chr13	-,+	TPTE2P1,PABPC3	2485,130103
chr13:25538889-25540128	chr13	+	20010045	20010095	False	NR_034026,NR_027248	chr13,chr13	+,-	LOC100287114,ANKRD26P3	-90907,-90932
chr13:25538889-25540128	chr13	-	25158420	25158471	False	NM_006437,NR_002815	chr13,chr13	-,+	PARP4,LOC374491	-71472,-4126
chr22:20464167-20465652	chr22	+	20464756	20465544	True	NM_015672,NR_026919	chr22,chr22	-,+	RIMBP3,LOC150197	-2970,-270953
chr22:20464167-20465652	chr22	-	21733893	21734681	False	NM_001128635,NR_003700,NM_001128633	chr22,chr22,chr22	+,-,+	RIMBP3B,PI4KAP2,RIMBP3C	3358,137150,2981
chr22:20464167-20465652	chr22	+	21908735	21909523	False	NM_001128635,NM_003347,NM_001128633	chr22,chr22,chr22	-,+,-	RIMBP3B,UBE2L3,RIMBP3C	-3362,12433,-2985
chr1:178690571-178691087	chr1	+	178690571	178691131	True	NM_152663,NM_004673	chr1,chr1	+,-	RALGPS2,ANGPTL1	3168,149138
chr1:150254113-150254364	chr1	+	150254138	150254406	True	NM_016022,NM_024579,NM_144697	chr1,chr1,chr1	-,+,+	APH1A,C1orf54,C1orf51	-12606,-9006,822
chr17:79351510-79352170	chr17	+	79351528	79351858	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	21681,-47054
chr22:21338143-21339440	chr22	+	21338157	21339185	True	NM_001008695,NM_006767	chr22,chr22	-,+	THAP7,LZTR1	17269,-1650
chr8:6737986-6738307	chr8	+	6737994	6738102	True	NM_005218,NM_018361	chr8,chr8	-,+	DEFB1,AGPAT5	-2465,-172167
chr17:17142377-17143710	chr17	+	17142516	17143567	True	NM_144997,NM_020201,NM_144606	chr17,chr17,chr17	-,+,-	FLCN,NT5M,FLCN	-2014,63112,-2014
chr19:22868477-22868813	chr19	+	22868496	22868581	True	NM_020855,NM_001080409	chr19,chr19	+,-	ZNF492,ZNF99	-51431,84258
chr14:23287902-23289036	chr14	+	23288182	23288960	True	NM_178336,NM_001126105,NM_003982,NM_001126106	chr14,chr14,chr14,chr14	+,-,-,-	MRPL52,SLC7A7,SLC7A7,SLC7A7	10131,-3110,-3110,104
chr8:7127927-7129299	chr8	+	7128645	7128983	True	NR_027000,NM_001164456,NM_001164452	chr8,chr8,chr8	-,+,+	LOC349196,FAM90A13,FAM90A14	-9,8308,8308
chr8:7127927-7129299	chr8	+	7121309	7121361	False	NR_027000,NM_001164456,NM_001164452	chr8,chr8,chr8	-,+,+	LOC349196,FAM90A13,FAM90A14	-295,-6934,-6934
chrX:71373754-71374639	chrX	+	71373755	71374435	True	NM_207422,NM_001024455	chrX,chrX	+,-	FLJ44635,RGAG4	-9773,-22004
chr16:612018-613268	chr16	+	612733	613037	True	NM_176677,NM_148920,NM_145270,NR_024121,NM_004204	chr16,chr16,chr16,chr16,chr16	+,+,+,-,+	NHLRC4,PIGQ,C16orf11,NCRNA00235,PIGQ	3994,6966,-2362,-35326,6966
chr10:120506488-120507519	chr10	+	120506586	120507186	True	NM_199461,NM_153810	chr10,chr10	+,-	NANOS1,C10orf46	282041,7629
chr1:20145857-20146172	chr1	+	20145898	20146220	True	NM_015207,NM_019062	chr1,chr1	+,-	OTUD3,RNF186	62667,-4127
chr13:51686086-51687087	chr13	+	51686144	51687122	True	NR_003923,NM_145019	chr13,chr13	-,+	GUCY1B2,FAM124A	-45851,109384
chr22:29473428-29474714	chr22	+	29473740	29474730	True	NM_015370,NM_032045,NM_001039570	chr22,chr22,chr22	-,+,+	C22orf31,KREMEN1,KREMEN1	-15833,-4727,-4727
chr8:12869938-12870277	chr8	+	12870145	12870323	True	NM_001164271,NM_001099677	chr8,chr8	-,+	DLC1,KIAA1456	103480,-430
chr1:15734384-15736032	chr1	+	15734476	15735984	True	NM_024329,NM_001229	chr1,chr1	+,-	EFHD2,CASP9	406,115006
chr15:72103777-72104168	chr15	+	72103871	72103961	True	NM_014249,NM_016346,NM_006901	chr15,chr15,chr15	+,+,-	NR2E3,NR2E3,MYO9A	-1028,-1028,306511
chr17:38981780-38983121	chr17	+	38981977	38983110	True	NM_000421,NM_145274,NM_001195387,NM_001195386	chr17,chr17,chr17,chr17	-,+,+,+	KRT10,TMEM99,TMEM99,TMEM99	-3114,-6666,-6696,-6603
chr1:22352810-22353177	chr1	+	22353107	22353215	True	NR_023919,NR_023918,NM_005529	chr1,chr1,chr1	+,+,-	HSPC157,HSPC157,HSPG2	-1123,-1458,-89357
chr2:190648262-190648632	chr2	+	190648269	190648619	True	NM_001128150,NM_001128144,NM_001128143,NM_016467,NM_000534	chr2,chr2,chr2,chr2,chr2	-,+,+,-,+	ORMDL1,PMS1,PMS1,ORMDL1,PMS1	528,191,191,528,191
chr19:1511329-1511741	chr19	+	1511480	1511744	True	NR_026557,NM_213604	chr19,chr19	+,-	PLK5P,ADAMTSL5	12333,1494
chr19:35718213-35718547	chr19	+	35718470	35718544	True	NM_152481,NM_015925	chr19,chr19	-,+	FAM187B,LSR	1134,21014
chr19:16739853-16740660	chr19	+	16739900	16740492	True	NM_004831,NM_024074	chr19,chr19	-,+	MED26,TMEM38A	-885,31445
chr20:26038126-26038731	chr20	+	26038186	26038764	True	NR_003678,NR_026713	chr20,chr20	-,+	C20orf191,FAM182A	55963,-2987
chr20:26038126-26038731	chr20	-	25778412	25778990	False	NR_004846,NR_027061,NR_026714	chr20,chr20,chr20	+,-,-	LOC100134868,FAM182B,FAM182B	211444,-1534,2987
chr19:12273574-12273793	chr19	+	12273694	12273758	True	NM_003437,NR_037801,NR_037802,NM_145233	chr19,chr19,chr19,chr19	+,-,-,-	ZNF136,ZNF625,ZNF625-ZNF20,ZNF625	113,-6148,-6148,-6148
chr5:82767737-82768367	chr5	+	82767763	82768189	True	NM_001126336,NM_004385,NM_001164097,NM_001884,NM_001164098	chr5,chr5,chr5,chr5,chr5	+,+,+,-,+	VCAN,VCAN,VCAN,HAPLN1,VCAN	-321,-321,-321,248759,-321
chr2:74013027-74014569	chr2	+	74013187	74013987	True	NM_001080474,NM_003584	chr2,chr2	+,-	C2orf78,DUSP11	-1922,-5903
chr2:74013027-74014569	chr2	+	74033192	74033580	False	NM_001080474,NM_003584	chr2,chr2	+,-	C2orf78,DUSP11	-21927,-25908
chr2:74013027-74014569	chr2	+	74028292	74028680	False	NM_001080474,NM_003584	chr2,chr2	+,-	C2orf78,DUSP11	-17027,-21008
chr2:74013027-74014569	chr2	+	74018497	74018885	False	NM_001080474,NM_003584	chr2,chr2	+,-	C2orf78,DUSP11	-7232,-11213
chr2:74013027-74014569	chr2	+	74023394	74023782	False	NM_001080474,NM_003584	chr2,chr2	+,-	C2orf78,DUSP11	-12129,-16110
chr16:89623094-89623532	chr16	+	89623126	89623544	True	NM_033251,NR_002450,NM_000977,NM_013275	chr16,chr16,chr16,chr16	+,+,+,-	RPL13,SNORD68,RPL13,ANKRD11	3586,4293,3545,-66157
chr2:50573051-50573376	chr2	+	50573050	50573368	True	NM_138735,NM_006872	chr2,chr2	-,+	NRXN1,GTF2A1L	1576,-1728164
chr5:135234667-135235194	chr5	+	135234673	135235221	True	NM_000590,NM_012159	chr5,chr5	-,+	IL9,FBXL21	-3157,30784
chr8:26321575-26323313	chr8	+	26321861	26323355	True	NM_001197293,NM_007257	chr8,chr8	+,-	DPYSL2,PNMA2	48353,48178
chr19:53720409-53721718	chr19	+	53720536	53721767	True	NM_024733,NM_173856	chr19,chr19	-,+	ZNF665,VN1R2	-23917,39777
chr12:132691948-132692180	chr12	+	132691971	132692227	True	NM_024078,NM_021808	chr12,chr12	+,-	NOC4L,GALNT9	-63029,-1398
chr19:48250117-48250618	chr19	+	48250128	48250618	True	NM_015710,NM_198479,NR_003048	chr19,chr19,chr19	+,-,+	GLTSCR2,TPRX1,SNORD23	-1386,56293,8491
chr6:43045338-43046600	chr6	+	43045455	43046414	True	NM_002821,NM_015950,NM_152882,NM_152881,NM_152880	chr6,chr6,chr6,chr6,chr6	+,-,+,+,+	PTK7,MRPL2,PTK7,PTK7,PTK7	-1478,-18213,-1478,-1478,-1478
chr21:44899153-44899445	chr21	+	44899277	44899425	True	NR_026960,NR_026863	chr21,chr21	+,-	C21orf125,C21orf84	-29424,-1174
chr17:58180077-58180636	chr17	+	58180163	58180454	True	NM_000717,NR_027408	chr17,chr17	+,-	CA4,LOC653653	46847,-23
chr21:45773398-45773681	chr21	+	45773402	45773716	True	NM_003307,NM_004928	chr21,chr21	+,-	TRPM2,C21orf2	-3,-14117
chr17:5403495-5403733	chr17	+	5403524	5403785	True	NM_001162371,NM_024039	chr17,chr17	-,+	LOC728392,MIS12	587,-13328
chr1:43642066-43642642	chr1	+	43642075	43642609	True	NM_001159936,NM_001167965,NM_001167966,NR_030778,NM_152498,NM_006824	chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,+,+,-	EBNA1BP2,WDR65,WDR65,WDR65,WDR65,EBNA1BP2	-3834,-4125,-4111,-4125,-4125,-4089
chr2:137083998-137085618	chr2	+	137084573	137085527	True	NM_003467,NM_014607	chr2,chr2	-,+	CXCR4,UBXN4	-208848,-585443
chr19:52073301-52074517	chr19	+	52073980	52074523	True	NM_007147,NR_034159	chr19,chr19	+,-	ZNF175,FLJ30403	7,23160
chr11:60741382-60742077	chr11	+	60741466	60742068	True	NR_027391,NM_006725	chr11,chr11	-,+	SLC15A3,CD6	-22209,-2402
chr3:143692177-143693448	chr3	+	143692225	143693437	True	NM_173653,NM_001134470,NM_173552	chr3,chr3,chr3	-,+,+	SLC9A9,C3orf58,C3orf58	-124852,-109,-1636
chrX:1656053-1656521	chrY	+	1606141	1606561	False	NM_178129,NR_027383	chrY,chrY	-,+	P2RY8,AKAP17A	-104,53924
chrX:1656053-1656521	chrX	+	1656141	1656561	True	NM_178129,NR_027383	chrX,chrX	-,+	P2RY8,AKAP17A	-104,53924
chr12:113909028-113909283	chr12	+	113909141	113909303	True	NM_022363,NM_138432	chr12,chr12	-,+	LHX5,SDSL	624,-48976
chr19:43380493-43382152	chr19	+	43380600	43382128	True	NM_001184826,NM_006905,NR_036584,NM_001184825	chr19,chr19,chr19,chr19	-,-,+,-	PSG1,PSG1,LOC100289650,PSG1	1793,1793,-54636,1793
chr12:22479243-22481024	chr12	+	22479400	22481062	True	NM_018686,NM_003034	chr12,chr12	+,-	CMAS,ST8SIA1	-280293,6636
chr10:124617905-124619498	chr10	+	124618391	124619406	True	NR_037912,NR_027282	chr10,chr10	-,+	CUZD1,LOC399815	-12700,19742
chr17:38334757-38335237	chr17	+	38334770	38335174	True	NM_016339,NM_021724	chr17,chr17	+,-	RAPGEFL1,NR1D1	-579,-77797
chr10:118380731-118381047	chr10	+	118380856	118381082	True	NM_005396,NM_144661	chr10,chr10	+,-	PNLIPRP2,C10orf82	-442,48449
chr14:56041439-56042586	chr14	+	56041573	56042601	True	NM_004986,NR_027123,NM_001079521,NM_001079522,NM_182926	chr14,chr14,chr14,chr14,chr14	+,-,+,+,+	KTN1,C14orf33,KTN1,KTN1,KTN1	4323,4259,4323,4323,4323
chr20:44991702-44992745	chr20	+	44991703	44992683	True	NM_152854,NM_173073,NM_015945,NM_173179	chr20,chr20,chr20,chr20	+,-,-,-	CD40,SLC35C2,SLC35C2,SLC35C2	-244854,431,431,431
chr7:84687986-84689670	chr7	+	84688290	84689713	True	NM_000840,NM_152754	chr7,chr7	+,-	GRM3,SEMA3D	1583516,61595
chr17:73904246-73904520	chr17	+	73904248	73904510	True	NM_001113324,NM_032478	chr17,chr17	+,-	C17orf106,MRPL38	70787,-3067
chr9:35649135-35649719	chr9	+	35649241	35649717	True	NM_014450,NM_001195201,NM_001195200,NR_003051,NM_001195217,NM_174923	chr9,chr9,chr9,chr9,chr9,chr9	-,+,+,-,+,+	SIT1,CCDC107,CCDC107,RMRP,CCDC107,CCDC107	1280,8569,8569,8348,8569,8569
chr2:173493069-173493851	chr2	+	173493069	173493577	True	NR_026995,NM_002610	chr2,chr2	-,+	LOC91149,PDK1	107414,-72344
chr16:728052-728281	chr16	+	728109	728273	True	NM_001005920,NM_003961,NM_005861	chr16,chr16,chr16	-,+,+	JMJD8,RHBDL1,STUB1	6222,-2085,1841
chr10:5060289-5062182	chr10	+	5060554	5062208	True	NM_001354,NM_205845,NM_001353	chr10,chr10,chr10	-,-,+	AKR1C2,AKR1C2,AKR1C1	-347,-347,-55151
chr15:44827556-44827849	chr15	+	44827561	44827753	True	NR_034171,NR_034170,NM_003758	chr15,chr15,chr15	-,-,+	LOC645212,LOC645212,EIF3J	1395,1418,1512
chr16:2892153-2892480	chr16	+	2892308	2892528	True	NR_026864,NM_145252	chr16,chr16	-,+	PRSS30P,ZG16B	274,-12186
chr5:179722361-179723132	chr5	+	179722370	179723140	True	NM_001135044,NM_139068,NM_139069,NM_015455,NM_139070,NM_002752	chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,+,-,-	MAPK9,MAPK9,MAPK9,CNOT6,MAPK9,MAPK9	-3299,-3299,-3299,198276,-3299,-3299
chr3:184970110-184970963	chr3	+	184970280	184971000	True	NM_001966,NM_004721,NM_001166415	chr3,chr3,chr3	-,+,-	EHHADH,MAP3K13,EHHADH	936,109969,936
chr17:66040113-66041133	chr17	+	66040149	66040858	True	NM_002266,NM_181656	chr17,chr17	+,-	KPNA2,C17orf58	-8358,-50384
chr4:5891831-5892051	chr4	+	5892010	5892082	True	NM_001313,NM_153717,NM_001014809	chr4,chr4,chr4	-,+,-	CRMP1,EVC,CRMP1	-1695,-179137,2753
chr14:77353704-77354648	chr14	+	77353770	77354396	True	NM_015305,NM_194287	chr14,chr14	-,+	ANGEL1,C14orf166B	-74487,-61096
chr2:85581035-85581257	chr2	+	85581104	85581262	True	NM_001135022,NM_001135023,NM_001135021,NM_032213,NM_017750	chr2,chr2,chr2,chr2,chr2	+,+,+,+,-	ELMOD3,ELMOD3,ELMOD3,ELMOD3,RETSAT	580,580,580,580,609
chr6:108325111-108326472	chr6	+	108325210	108326390	True	NM_007214,NM_003269	chr6,chr6	-,+	SEC63,NR2E1	-45728,160824
chr19:51815635-51816002	chr19	+	51815925	51816001	True	NM_001163922,NM_001101372	chr19,chr19	-,+	VSIG10L,IGLON5	29427,-874
chr17:39682519-39683507	chr17	+	39682644	39683359	True	NM_002276,NM_005801,NM_002275	chr17,chr17,chr17	-,+,-	KRT19,EIF1,KRT15	1332,161767,-7374
chr15:67546589-67546984	chr15	+	67546588	67546984	True	NM_001031715,NM_022784,NM_024666	chr15,chr15,chr15	+,+,-	IQCH,IQCH,AAGAB	153,153,140
chr1:153628451-153629329	chr1	+	153628727	153629011	True	NM_012437,NM_004515	chr1,chr1	+,-	SNAPIN,ILF2	2133,14522
chr3:187416181-187416385	chr3	+	187416183	187416421	True	NR_034062,NM_001004312	chr3,chr3	+,-	LOC100131635,RTP2	3732,3974
chr16:89041375-89041830	chr16	+	89041552	89041856	True	NM_005187,NM_016209	chr16,chr16	-,+	CBFA2T3,TRAPPC2L	1698,-118097
chr17:17743193-17743411	chr17	+	17743206	17743370	True	NM_001005291,NM_004176,NM_001130091	chr17,chr17,chr17	-,-,+	SREBF1,SREBF1,LRRC48	-2881,-2881,132756
chr20:50385422-50386290	chr20	+	50385455	50386175	True	NM_006045,NM_014484	chr20,chr20	-,+	ATP9A,MOCS3	-547,-810143
chr6:39768412-39769540	chr6	+	39768561	39769494	True	NM_145027,NM_001201427,NM_015345	chr6,chr6,chr6	-,+,+	KIF6,DAAM2,DAAM2	-75380,-8453,-7839
chr9:840502-841395	chr9	+	840511	841353	True	NM_021951,NM_152569	chr9,chr9	+,-	DMRT1,C9orf66	336,-624618
chr3:49156609-49157767	chr3	+	49156722	49157758	True	NM_001199161,NM_001199160,NM_001199162,NM_173546,NM_006677	chr3,chr3,chr3,chr3,chr3	-,-,-,+,-	USP19,USP19,USP19,KLHDC8B,USP19	663,663,663,51259,663
chr16:2264500-2264758	chr16	+	2264518	2264724	True	NM_004424,NM_001199174,NM_001199175,NM_001199173,NM_182563,NM_022372,NM_001042371	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,-,+,-	E4F1,MLST8,MLST8,MLST8,C16orf79,MLST8,PGP	8842,-8837,-9391,-9391,-3449,-9391,148
chr9:45351078-45352119	chr9	+	45351833	45352055	True	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-361648,-1721103
chr9:45351078-45352119	chr9	+	66489138	66489188	False	NR_024443,NR_024496	chr9,chr9	-,+	LOC100133920,LOC442421	541844,5080
chr18:29597634-29597952	chr18	+	29597635	29597960	True	NM_014939,NM_017831	chr18,chr18	-,+	TRAPPC8,RNF125	-74544,484
chr19:39521401-39521819	chr19	+	39521578	39521818	True	NM_178820,NM_001004318	chr19,chr19	-,+	FBXO27,PAPL	1430,53126
chr17:43584088-43584821	chr17	+	43584250	43584826	True	NR_002940,NR_037772	chr17,chr17	-,+	LRRC37A4,CRHR1	13113,112883
chr9:127019705-127019966	chr9	+	127019787	127019977	True	NM_002799,NM_014397,NM_001145001,NM_001166168,NM_001166167	chr9,chr9,chr9,chr9,chr9	-,+,+,+,+	PSMB7,NEK6,NEK6,NEK6,NEK6	157794,218,218,552,0
chr13:20806768-20807093	chr13	+	20806924	20807053	True	NM_001110221,NM_001110219,NM_001190965,NM_006783,NM_001110220	chr13,chr13,chr13,chr13,chr13	-,-,+,-,-	GJB6,GJB6,ZMYM2,GJB6,GJB6	-390,-390,-274001,-1552,-390
chrY:20487662-20488009	chrY	+	20487750	20488058	True	NR_028083,NR_002161,NR_002160	chrY,chrY,chrY	-,+,+	FAM41AY1,NCRNA00230A,NCRNA00230B	78924,360,381
chrY:20487662-20488009	chrY	-	19691714	19692022	False	NR_028084,NR_002161,NR_002160	chrY,chrY,chrY	+,-,-	FAM41AY2,NCRNA00230A,NCRNA00230B	-78927,-361,-382
chr2:48665394-48666335	chr2	+	48665417	48666025	True	NM_152994,NM_000233,NM_001193475,NM_001135629,NR_024188	chr2,chr2,chr2,chr2,chr2	+,-,+,+,+	KLRAQ1,LHCGR,KLRAQ1,KLRAQ1,KLRAQ1	1882,316905,1882,1882,1882
chr13:24003660-24004201	chr13	+	24003793	24004058	True	NM_001204459,NM_014363	chr13,chr13	+,-	TNFRSF19,SACS	140450,3846
chr19:16146488-16147082	chr19	+	16146515	16147131	True	NR_024336,NR_024335,NM_021187	chr19,chr19,chr19	+,+,-	FLJ25328,FLJ25328,CYP4F11	-1278,-2044,-100839
chr17:46670123-46670916	chr17	+	46670217	46670945	True	NR_033204,NR_033205,NR_033202,NR_033203,NR_033201,NM_002147	chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,-	LOC404266,LOC404266,LOC404266,LOC404266,LOC404266,HOXB5	-586,2374,-2426,-614,-2445,208
chr10:5528007-5528257	chr10	+	5528055	5528157	True	NM_017422,NM_005185	chr10,chr10	-,+	CALML5,CALML3	13426,38766
chr5:110027914-110028116	chr5	+	110027919	110027993	True	NM_001039763,NM_138773	chr5,chr5	-,+	TMEM232,SLC25A46	34515,46760
chr2:27885942-27886272	chr2	+	27885941	27886234	True	NM_018158,NM_014860	chr2,chr2	+,-	SLC4A1AP,SUPT7L	103,265
chr1:47013722-47014478	chr1	+	47013828	47014388	True	NM_001097611,NM_172225	chr1,chr1	-,+	KNCN,DMBX1	2549,-41224
chr3:46605259-46605922	chr3	+	46605268	46605967	True	NM_001174136,NM_024512	chr3,chr3	+,-	TDGF1,LRRC2	10077,2094
chr10:135170445-135170735	chr10	+	135170681	135170783	True	NM_001145201,NM_145202,NM_001098483,NM_198472	chr10,chr10,chr10,chr10	+,+,-,-	PRAP1,PRAP1,C10orf125,C10orf125	-9888,-9888,796,796
chr9:116163293-116163509	chr9	+	116163304	116163550	True	NR_027261,NM_017443,NM_152786,NM_000031	chr9,chr9,chr9,chr9	-,-,+,-	POLE3,POLE3,C9orf43,ALAD	9455,9529,9471,118
chr15:90732058-90733348	chr15	+	90732258	90733248	True	NM_020210,NM_006384	chr15,chr15	+,-	SEMA4B,CIB1	-4157,44081
chr1:94352840-94353117	chr1	+	94352839	94353007	True	NM_014597,NR_030621	chr1,chr1	-,+	DNTTIP2,MIR760	-8077,-40508
chrX:49092833-49093690	chrX	+	49093007	49093447	True	NM_005183,NM_014008	chrX,chrX	-,+	CACNA1F,CCDC22	-3174,-1131
chr12:97295959-97296797	chr12	+	97296048	97296524	True	NM_002595,NM_152905,NM_001135175,NM_001135176,NM_001135177	chr12,chr12,chr12,chr12,chr12	-,+,+,+,+	CDK17,NEDD1,NEDD1,NEDD1,NEDD1	-501682,4476,4719,4476,4476
chr11:120970479-120972211	chr11	+	120970632	120972246	True	NM_012101,NM_005422	chr11,chr11	-,+	TRIM29,TECTA	-961769,1128
chr5:180668566-180670303	chr5	+	180668658	180670205	True	NR_002592,NM_006098,NR_002591,NM_201627	chr5,chr5,chr5,chr5	-,-,-,+	SNORD96A,GNB2L1,SNORD95,TRIM41	-125,751,221,-18404
chr15:75314931-75315815	chr15	+	75314935	75315794	True	NM_017793,NM_021823	chr15,chr15	-,+	RPP25,PPCDC	-65160,132
chr16:57831404-57831640	chr16	+	57831440	57831686	True	NM_001130099,NM_001130100,NM_005550,NM_005886	chr16,chr16,chr16,chr16	-,-,-,+	KIFC3,KIFC3,KIFC3,KATNB1	293,4803,4803,-61831
chr5:137549096-137549526	chr5	+	137549095	137549484	True	NM_005733,NM_004661	chr5,chr5	+,-	KIF20A,CDC23	-34729,-63
chr2:24305885-24306493	chr2	+	24306031	24306457	True	NM_147184,NM_054033,NM_004881,NM_016047	chr2,chr2,chr2,chr2	-,+,-,-	TP53I3,FKBP1B,TP53I3,SF3B14	1248,-33499,1321,-6717
chr12:27928366-27929517	chr12	+	27928647	27929548	True	NM_001146221,NM_020782	chr12,chr12	-,+	LOC100287284,KLHDC5	-4438,3638
chrX:32429539-32431468	chrX	+	32429896	32431352	True	NM_004011,NM_004012,NM_203391	chrX,chrX,chrX	-,-,+	DMD,DMD,GK	-23,-23,-1758471
chr1:203317593-203317840	chr1	+	203317701	203317841	True	NM_002023,NM_006763	chr1,chr1	-,+	FMOD,BTG2	2498,-43088
chr5:54617729-54618010	chr5	+	54617729	54618052	True	NM_019030,NM_015360	chr5,chr5	-,+	DHX29,SKIV2L2	-14208,-14211
chr2:107159909-107161210	chr2	+	107160234	107161093	True	NM_001144013,NR_003506	chr2,chr2	-,+	RGPD3,PLGLA	-75433,-157524
chr9:135998620-135998958	chr9	+	135998647	135998987	True	NR_001275,NM_006266	chr9,chr9	+,-	CELP,RALGDS	-40772,-2086
chrX:2995602-2996138	chrX	+	2995718	2996188	True	NM_000047,NM_004042	chrX,chrX	-,+	ARSE,ARSF	-113224,-10938
chr1:100504190-100504401	chr1	+	100504354	100504446	True	NM_033055,NM_194292	chr1,chr1	+,-	HIAT1,SASS6	-616,94115
chr3:74188064-74188283	chr3	+	74188063	74188325	True	NM_018029,NM_020872	chr3,chr3	+,-	EBLN2,CNTN3	-1077305,382068
chr19:4829572-4830190	chr19	+	4829606	4829764	True	NM_182919,NM_018708	chr19,chr19	-,+	TICAM1,FEM1A	2037,-37937
chr3:195720195-195720585	chr3	+	195720219	195720621	True	NR_034088,NR_003264	chr3,chr3	+,-	LOC401109,SDHAP1	148885,-3069
chr3:195720195-195720585	chr3	+	197358109	197358205	False	NR_003266,NM_001011537	chr3,chr3	-,+	LOC220729,FYTTD1	-3357,118218
chr3:195720195-195720585	chr3	-	195381480	195381740	False	NM_001647,NR_003265	chr3,chr3	-,+	APOD,SDHAP2	-70404,3169
chr19:49565895-49566146	chr19	+	49566073	49566173	True	NM_006179,NM_033043,NM_033142	chr19,chr19,chr19	-,+,-	NTF4,CGB5,CGB7	1001,-19030,-7076
chr1:156082459-156083017	chr1	+	156082534	156082728	True	NM_001093725,NM_005572,NM_170707,NM_170708	chr1,chr1,chr1,chr1	-,+,+,+	MEX3A,LMNA,LMNA,LMNA	-30745,1732,1732,1732
chr1:180121177-180121900	chr1	+	180121204	180121842	True	NM_001004128,NR_037642,NM_002826	chr1,chr1,chr1	+,-,+	QSOX1,LOC100527964,QSOX1	2125,122024,2125
chr12:21466591-21467874	chr12	+	21466989	21467912	True	NM_021094,NM_000415	chr12,chr12	-,+	SLCO1A2,IAPP	19971,57889
chr13:74709248-74709454	chr13	+	74709286	74709442	True	NR_034024,NM_007249	chr13,chr13	+,-	LOC338864,KLF12	417537,-1220
chr12:31943702-31944713	chr12	+	31943848	31944562	True	NM_001135863,NM_001013699	chr12,chr12	+,-	METTL20,H3F3C	-131306,663
chr22:33198370-33199357	chr22	+	33198547	33199313	True	NM_003490,NM_000362	chr22,chr22	-,+	SYN3,TIMP3	203543,-1796
chr2:71454039-71454271	chr2	+	71454077	71454209	True	NM_005791,NM_020459	chr2,chr2	+,-	MPHOSPH10,PAIP2B	-96684,74
chr19:7542670-7543138	chr19	+	7542669	7542977	True	NR_024491,NM_198534	chr19,chr19	-,+	LOC100128573,C19orf45	-4422,19467
chr7:116311994-116312305	chr7	+	116312029	116312095	True	NM_000245,NR_002330,NM_001127500	chr7,chr7,chr7	+,-,+	MET,ST7OT1,MET	363,282343,363
chr3:53106294-53106867	chr3	+	53106316	53106836	True	NM_016329,NM_006254	chr3,chr3	-,+	SFMBT1,PRKCD	-26227,88386
chr8:8560864-8562320	chr8	+	8560894	8562238	True	NM_004225,NM_194284	chr8,chr8	-,+	MFHAS1,CLDN23	188943,-1279
chr5:149665985-149666344	chr5	+	149666086	149666292	True	NM_001008657,NM_171825,NM_015981	chr5,chr5,chr5	+,-,-	TCOF1,CAMK2A,CAMK2A	70909,3161,3161
chr12:54366341-54366981	chr12	+	54366411	54366969	True	NM_014212,NR_003716	chr12,chr12	+,-	HOXC11,HOTAIR	7,-3896
chr18:61781358-61781655	chr18	+	61781477	61781693	True	NR_027245,NR_033881	chr18,chr18	-,+	C18orf20,LOC284294	34617,-10206
chrX:48662371-48663848	chrX	+	48662601	48663603	True	NM_006044,NM_013271	chrX,chrX	+,-	HDAC6,PCSK1N	-2165,30407
chr4:177713096-177713361	chr4	+	177713097	177713323	True	NM_021928,NM_005429	chr4,chr4	+,-	SPCS3,VEGFC	-472058,622
chr4:111120881-111122072	chr4	+	111121279	111121757	True	NM_001130721,NM_024090,NM_001977	chr4,chr4,chr4	-,-,+	ELOVL6,ELOVL6,ENPEP	-1508,-1459,275471
chr1:221054601-221055642	chr1	+	221054694	221055566	True	NM_021958,NR_024236	chr1,chr1	+,-	HLX,LOC400804	-2002,454122
chr12:38470346-38472112	chr12	+	38470823	38471970	True	NM_001013620,NM_153634	chr12,chr12	+,-	ALG10B,CPNE8	238586,827509
chr15:28822622-28822864	chr15	+	28822759	28822845	True	NR_036443,NR_033351	chr15,chr15	+,-	HERC2P9,GOLGA8F	76742,-44616
chr15:28822622-28822864	chr15	-	28579074	28579160	False	NM_004667,NR_033351	chr15,chr15	-,+	HERC2,GOLGA8F	-11779,44623
chr15:28822622-28822864	chr15	-	20723214	20723278	False	NR_036432,NR_027411	chr15,chr15	-,+	HERC2P3,GOLGA8C	-11781,44395
chr15:28822622-28822864	chr15	-	23677708	23677772	False	NM_005664,NM_019066	chr15,chr15	+,-	MKRN3,MAGEL2	132681,215271
chr15:44173968-44175094	chr15	+	44173971	44174993	True	NM_024908,NR_003571	chr15,chr15	+,-	WDR76,LOC728758	-54912,-3602
chr6:1389546-1389774	chr6	+	1389546	1389662	True	NM_001452,NR_027116	chr6,chr6	+,-	FOXF2,LOC285768	406,-287979
chr7:150755755-150755979	chr7	+	150755870	150756027	True	NM_001164410,NM_001199693,NM_001199692,NM_003040,NM_004935,NM_001199694	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,-,+	CDK5,SLC4A2,SLC4A2,SLC4A2,CDK5,SLC4A2	-818,3606,-630,629,-818,3711
chr10:123353348-123353652	chr10	+	123353354	123353686	True	NM_000141,NM_022970,NM_001144916,NM_001144917,NM_001144914,NM_001144915,NM_206861,NM_001144913,NM_001144918,NM_001144919	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,-,-,+,-,-,-	FGFR2,FGFR2,FGFR2,FGFR2,FGFR2,FGFR2,TACC2,FGFR2,FGFR2,FGFR2	4336,4336,136,4336,-57,2523,395002,-57,4336,4336
chr3:137833354-137833950	chr3	+	137833464	137833822	True	NM_014154,NM_173543,NM_001170538	chr3,chr3,chr3	+,-,-	ARMC8,DZIP1L,DZIP1L	72325,679,-1142
chr2:131514701-131515081	chr2	+	131514763	131515041	True	NM_001105193,NM_001079530,NM_001105195,NM_001105194,NM_152698	chr2,chr2,chr2,chr2,chr2	+,-,+,+,+	FAM123C,CFC1B,FAM123C,FAM123C,FAM123C	-1590,-157512,-950,-950,-1737
chr15:79725326-79725593	chr15	+	79725345	79725584	True	NM_015206,NM_002891	chr15,chr15	+,-	KIAA1024,RASGRF1	-538,-342130
chr14:65005682-65006490	chr14	+	65005831	65006239	True	NM_006977,NM_021979	chr14,chr14	-,+	ZBTB25,HSPA2	-35277,946
chr19:16294390-16294962	chr19	+	16294681	16294751	True	NM_014077,NM_054113	chr19,chr19	+,-	FAM32A,CIB3	1483,-10395
chr16:3097294-3097529	chr16	+	3097343	3097525	True	NM_001103175,NM_022468	chr16,chr16	-,+	CCDC64B,MMP25	-11801,-712
chr10:79795352-79796537	chr10	+	79795543	79796420	True	NM_001026,NM_007055,NM_001142282,NM_001142283,NM_001142284,NM_033022,NM_001142285	chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,-,+,+,+,+,+	RPS24,POLR3A,RPS24,RPS24,RPS24,RPS24,RPS24	-2076,-6245,-2076,-2076,-2076,-2076,-2076
chr10:118955767-118956009	chr10	+	118955780	118956048	True	NR_037436,NM_181840	chr10,chr10	-,+	MIR3663,KCNK18	-28495,951
chr1:26442214-26442598	chr1	+	26442325	26442593	True	NR_026685,NR_026686,NM_032588,NM_152835	chr1,chr1,chr1,chr1	+,+,-,+	PDIK1L,PDIK1L,TRIM63,PDIK1L	-4725,-4113,-48204,-4113
chr14:74110891-74111256	chr14	+	74110938	74111245	True	NM_031427,NM_001201366,NM_006029	chr14,chr14,chr14	+,+,-	DNAL1,DNAL1,PNMA1	332,332,69940
chr1:10860463-10861517	chr1	+	10860659	10861219	True	NM_001079843,NM_007375,NM_017766	chr1,chr1,chr1	-,+,-	CASZ1,TARDBP,CASZ1	-3952,211459,-3952
chr21:46104906-46105649	chr21	+	46104909	46105623	True	NM_181686,NM_198699	chr21,chr21	-,+	KRTAP12-1,KRTAP10-12	-2831,11463
chr9:91924785-91925365	chr9	+	91924835	91925243	True	NM_016848,NM_001827,NR_036108,NM_024077	chr9,chr9,chr9,chr9	-,+,+,+	SHC3,CKS2,MIR3153,SECISBP2	-131153,869,1896,8168
chrY:20310173-20310537	chrY	+	20310189	20310555	True	NM_004677,NR_028083	chrY,chrY	+,-	XKRY,FAM41AY1	-12905,256427
chrY:20310173-20310537	chrY	-	19869219	19869585	False	NR_028084,NM_001002906	chrY,chrY	+,-	FAM41AY2,XKRY2	-256432,12905
chr19:19280524-19280934	chr19	+	19280542	19280974	True	NM_001145785,NM_003721	chr19,chr19	-,+	MEF2B,RFXANK	174,22033
chr8:27183367-27183588	chr8	+	27183399	27183473	True	NM_173176,NM_173175,NM_004103,NM_171982	chr8,chr8,chr8,chr8	+,+,+,-	PTK2B,PTK2B,PTK2B,TRIM35	-457,-372,-3534,-14565
chr1:219784810-219786271	chr6	-	66011747	66012728	False	NR_026540,NM_198283	chr6,chr6	+,-	MCART3P,EYS	485043,277019
chr1:219784810-219786271	chr1	+	219785090	219786198	True	NM_138794,NM_018713	chr1,chr1	+,-	LYPLAL1,SLC30A10	-437949,315845
chr11:64087163-64087606	chr11	+	64087358	64087475	True	NM_181652,NM_012094,NM_016404,NM_181651	chr11,chr11,chr11,chr11	+,+,-,+	PRDX5,PRDX5,TRMT112,PRDX5	-1840,-1840,-2325,-1840
chr8:42012343-42013175	chr8	+	42012446	42013160	True	NM_006803,NM_001134296,NM_000930	chr8,chr8,chr8	+,+,-	AP3M2,AP3M2,PLAT	-2033,-2033,52084
chr9:26951751-26952433	chr9	+	26951911	26952110	True	NM_001099224,NM_001031689,NM_025103,NM_001099223,NM_001099222	chr9,chr9,chr9,chr9,chr9	+,-,+,+,+	IFT74,PLAA,IFT74,IFT74,IFT74	4260,-4443,4260,-4937,-4664
chr19:47731867-47733183	chr19	+	47731996	47733178	True	NM_001127241,NM_001127240,NM_001127242,NR_036159,NR_036158,NM_014417	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,+,-	BBC3,BBC3,BBC3,MIR3191,MIR3190,BBC3	2895,2895,2895,-1720,-1848,1323
chr2:211337819-211339187	chr2	+	211338385	211339082	True	NM_001136575,NM_001136574,NM_006055,NM_001122633	chr2,chr2,chr2,chr2	-,-,-,+	LANCL1,LANCL1,LANCL1,CPS1	2472,2402,2464,3323
chr19:1101876-1102145	chr19	+	1101910	1102192	True	NM_001039847,NM_002085,NM_002695,NM_001039848	chr19,chr19,chr19,chr19	+,+,-,+	GPX4,GPX4,POLR2E,GPX4	1743,1743,-6519,2456
chr19:1174914-1175703	chr19	+	1174983	1175747	True	NM_000455,NM_014963	chr19,chr19	+,-	STK11,SBNO2	30050,-701
chr6:166723127-166724666	chr6	+	166723136	166724456	True	NM_175922,NR_027284	chr6,chr6	-,+	PRR18,LOC441177	-1265,-322148
chr19:38923967-38924180	chr19	+	38923968	38924128	True	NM_170604,NM_001146204,NM_001146205,NM_001146206,NM_001146207,NM_001146202,NM_001146203,NM_000540,NM_001042723	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,+,+	RASGRP4,RASGRP4,RASGRP4,RASGRP4,RASGRP4,RASGRP4,RASGRP4,RYR1,RYR1	-7023,-7023,-7023,-7023,-7023,-7023,-7023,211,211
chr3:19989216-19990968	chr3	+	19989396	19991013	True	NM_144715,NM_004162	chr3,chr3	-,+	EFHB,RAB5A	-13690,-875
chr12:54380075-54380348	chr12	+	54380237	54380317	True	NR_029617,NR_003716,NM_017409	chr12,chr12,chr12	+,-,+	MIR196A2,HOTAIR,HOXC10	5204,-17722,-1345
chr1:236272528-236272735	chr1	+	236272612	236272778	True	NM_002508,NM_003272	chr1,chr1	-,+	NID1,GPR137B	-44131,33053
chr21:44779239-44779868	chr21	+	44779330	44779781	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	90122,67276
chr13:28187628-28187952	chr13	+	28187923	28187985	True	NM_015972,NM_153371,NM_152705	chr13,chr13,chr13	+,-,+	POLR1D,LNX2,POLR1D	8043,6785,8017
chr19:53229830-53231318	chr19	+	53230051	53231051	True	NR_023311,NM_001161499,NM_001161500,NM_001161501,NM_030972	chr19,chr19,chr19,chr19,chr19	+,-,-,-,-	ZNF137P,ZNF611,ZNF611,ZNF611,ZNF611	-130172,7306,7306,7296,2134
chr11:118935077-118936996	chr11	+	118935628	118936926	True	NM_021729,NM_006389,NM_001130991	chr11,chr11,chr11	+,-,-	VPS11,HYOU1,HYOU1	1566,-7712,-7703
chr3:180704363-180705086	chr3	+	180704394	180705132	True	NM_001190233,NM_005087,NR_033725,NR_033724,NM_145261,NR_033721,NR_033723,NR_033722	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-,-,-	DNAJC19,FXR1,DNAJC19,DNAJC19,DNAJC19,DNAJC19,DNAJC19,DNAJC19	2231,-74224,2487,2487,2487,2487,2487,2487
chr3:56500019-56500233	chr3	+	56500019	56500292	True	NM_015576,NM_001012506	chr3,chr3	-,+	ERC2,CCDC66	2160,90891
chr2:158142018-158142475	chr2	+	158142020	158142512	True	NM_014568,NM_020711	chr2,chr2	+,-	GALNT5,ERMN	-27731,39960
chr12:7456341-7456986	chr12	+	7456355	7457005	True	NM_174941,NM_001080454	chr12,chr12	-,+	CD163L1,ACSM4	139794,8
chr9:100745325-100745553	chr9	+	100745382	100745582	True	NM_018437,NM_006401	chr9,chr9	-,+	HEMGN,ANP32B	-38248,56
chr9:140117337-140117796	chr9	+	140117357	140117845	True	NM_001190228,NM_080877,NM_001177316,NM_001177317,NM_031297,NM_199001	chr9,chr9,chr9,chr9,chr9,chr9	+,+,+,+,-,+	LOC643596,SLC34A3,SLC34A3,SLC34A3,RNF208,C9orf169	4172,7539,7363,7363,-1582,1798
chr16:1545777-1546078	chr16	+	1545787	1546077	True	NM_001013658,NM_016111	chr16,chr16	-,+	PTX4,TELO2	-7319,-2486
chr14:24037184-24037662	chr14	+	24037297	24037649	True	NR_023314,NM_003917	chr14,chr14	+,-	THTPA,AP1G2	-12152,-18
chr1:32229133-32229404	chr1	+	32229137	32229199	True	NM_001703,NR_036216,NM_001525	chr1,chr1,chr1	-,-,+	BAI2,MIR4254,HCRTR1	499,-4801,-145887
chrX:52780209-52780584	chrX	+	52780365	52780545	True	NM_003147,NM_175698,NM_001164417	chrX,chrX,chrX	+,+,+	SSX2,SSX2,SSX2B	-112,-112,-112
chrX:52780209-52780584	chrX	-	52736011	52736191	False	NM_003147,NM_175698,NM_001164417	chrX,chrX,chrX	-,-,-	SSX2,SSX2,SSX2B	112,112,112
chr22:35599579-35599941	chr22	+	35599590	35599990	True	NM_001003681,NM_005368	chr22,chr22	+,-	HMGXB4,MB	53454,413444
chr22:19111610-19112181	chr22	+	19111620	19112167	True	NM_053006,NM_005137,NM_001173533,NM_001184781,NM_001173534,NR_033674	chr22,chr22,chr22,chr22,chr22,chr22	+,-,-,-,-,-	TSSK2,DGCR2,DGCR2,DGCR2,DGCR2,DGCR2	6153,-1653,-1653,-1653,-1653,-1653
chr20:60638861-60639171	chr20	+	60638910	60639218	True	NM_144703,NM_003185	chr20,chr20	+,-	LSM14B,TAF4	58298,1698
chrX:14547233-14548184	chrX	+	14547232	14548220	True	NM_002063,NM_001171942,NM_001118885,NM_001018113,NM_001118886	chrX,chrX,chrX,chrX,chrX	+,+,+,-,+	GLRA2,GLRA2,GLRA2,FANCB,GLRA2	135,135,135,343014,135
chr21:38380520-38380980	chr21	+	38380539	38380725	True	NM_000411,NM_018962	chr21,chr21	-,+	HLCS,DSCR6	-18003,-1727
chrX:21961257-21962534	chrX	+	21961332	21962386	True	NM_004595,NM_014332	chrX,chrX	+,-	SMS,SMPX	-2671,-185102
chr11:55681275-55682455	chr11	+	55681303	55682473	True	NM_032681,NM_001001960	chr11,chr11	+,-	SPRYD5,OR5W2	-30581,-11
chr8:91805160-91806012	chr8	+	91805222	91805811	True	NM_001146273,NM_022351	chr8,chr8	-,+	TMEM64,NECAB1	-147089,-1352
chr2:232063746-232064570	chr2	+	232063764	232064220	True	NM_025139,NM_000867	chr2,chr2	+,-	ARMC9,HTR2B	-473,-73940
chr4:15386224-15386472	chr4	+	15386224	15386408	True	NM_001193534,NM_001135171	chr4,chr4	-,+	FBXL5,C1QTNF7	270685,-10108
chr1:39345254-39345489	chr1	+	39345254	39345396	True	NR_037633,NR_037632,NR_037637,NR_037636,NR_037635,NR_037634,NM_012333,NM_030772,NM_001136275	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,-,-,-,+	GJA9-MYCBP,MYCBP,GJA9-MYCBP,GJA9-MYCBP,GJA9-MYCBP,GJA9-MYCBP,MYCBP,GJA9,AKIRIN1	1954,-6204,1954,1954,1954,1954,-6204,1954,111519
chr14:58765013-58765305	chr14	+	58765073	58765267	True	NM_023000,NM_023001,NM_002892,NR_029434,NR_029435	chr14,chr14,chr14,chr14,chr14	+,+,+,-,-	ARID4A,ARID4A,ARID4A,FLJ31306,FLJ31306	-6,-6,-6,-218,-218
chr20:56102315-56103987	chr20	+	56102608	56103974	True	NM_002591,NM_080618	chr20,chr20	+,-	PCK1,CTCFL	32162,-2454
chr19:8274996-8275943	chr19	+	8275078	8275926	True	NM_024552,NM_032447	chr19,chr19	+,-	LASS4,FBN3	-912,-62693
chr19:37567895-37568115	chr19	+	37567956	37568136	True	NM_144689,NM_199126	chr19,chr19	+,-	ZNF420,ZNF585A	1245,95247
chr17:56463641-56464866	chr17	+	56464047	56464737	True	NM_017763,NR_027647	chr17,chr17	-,+	RNF43,LPO	30244,-148323
chr3:9808581-9809911	chr3	+	9808694	9809792	True	NM_003656,NM_016829	chr3,chr3	-,+	CAMK1,OGG1	1926,-17117
chr11:93527882-93529206	chr11	+	93527884	93529065	True	NM_024116,NM_004268	chr11,chr11	-,+	TAF1D,MED17	-53181,-10542
chr12:108538024-108538766	chr12	+	108538029	108538785	True	NM_014653,NM_001142345	chr12,chr12	+,-	WSCD2,CMKLR1	-14571,175704
chr17:40275341-40275880	chr17	+	40275340	40275496	True	NM_021078,NM_033194	chr17,chr17	-,+	KAT2A,HSPB9	-1958,-635
chr19:44113816-44114645	chr19	+	44113912	44114694	True	NM_001145641,NM_182498	chr19,chr19	+,-	SRRM5,ZNF428	1558,9372
chr9:104138092-104139035	chr9	+	104138255	104139053	True	NM_001127610,NM_001701,NM_003452	chr9,chr9,chr9	-,-,+	BAAT,BAAT,ZNF189	6798,8284,22109
chr19:36157661-36158325	chr19	+	36157745	36158165	True	NM_024660,NM_007000	chr19,chr19	-,+	IGFLR1,UPK1A	75236,-81
chr6:142939159-142940315	chr6	+	142939169	142940300	True	NR_027311,NM_198569	chr6,chr6	-,+	LOC153910,GPR126	18724,-316164
chr18:51752573-51753937	chr18	+	51752841	51753805	True	NR_002970,NM_007195,NM_015832,NM_003927	chr18,chr18,chr18,chr18	-,+,-,-	SNORA37,POLI,MBD2,MBD2	-4059,42043,-1683,-1683
chr14:54420541-54420776	chr14	+	54420558	54420822	True	NM_130850,NM_001202,NM_130851,NM_001130851	chr14,chr14,chr14,chr14	-,-,-,+	BMP4,BMP4,BMP4,CDKN3	2782,2782,498,442850
chr2:206547785-206548222	chr2	+	206547806	206548209	True	NM_201266,NM_201267,NM_201264,NM_201279,NM_003872,NM_018534,NM_017759	chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,+,+,-	NRP2,NRP2,NRP2,NRP2,NRP2,NRP2,INO80D	-633,-633,-633,-633,-633,-633,402747
chr7:94549961-94550478	chr7	+	94549989	94550402	True	NM_001166163,NM_003919	chr7,chr7	+,-	PPP1R9A,SGCE	-10831,-264468
chr7:45126542-45127924	chr7	+	45126622	45127562	True	NM_001146334,NM_001029835	chr7,chr7	-,+	NACAD,CCM2	981,-59440
chr19:50841082-50841585	chr19	+	50841126	50841314	True	NM_004977,NM_007121,NR_002798	chr19,chr19,chr19	-,+,-	KCNC3,NR1H2,NAPSB	-8492,38370,6741
chr19:1593057-1593360	chr19	+	1593082	1593228	True	NR_026557,NM_003926	chr19,chr19	+,-	PLK5P,MBD3	-69055,-430
chr9:138525186-138525775	chr9	+	138525393	138525762	True	NM_001001676,NM_182974	chr9,chr9	+,-	LCN9,GLT6D1	29405,5674
chr4:140219873-140220282	chr4	+	140219903	140219963	True	NM_001184987,NM_001184986,NM_001184990,NM_001184991,NM_001184989,NM_001184988,NM_057175,NM_002494	chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4	-,-,-,-,-,-,+,-	NDUFC1,NDUFC1,NDUFC1,NDUFC1,NDUFC1,NDUFC1,NAA15,NDUFC1	3792,2451,3792,2451,3792,3792,2712,2475
chr10:123352573-123353081	chr10	+	123352628	123353118	True	NM_000141,NM_022970,NM_001144916,NM_001144917,NM_001144914,NM_001144915,NM_206861,NM_001144913,NM_001144918,NM_001144919	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,-,-,+,-,-,-	FGFR2,FGFR2,FGFR2,FGFR2,FGFR2,FGFR2,TACC2,FGFR2,FGFR2,FGFR2	4904,4904,704,4904,413,3091,395570,413,4904,4904
chr8:143959409-143959976	chr8	+	143959492	143959959	True	NM_001026213,NM_002066,NM_000497	chr8,chr8,chr8	-,+,-	CYP11B1,GML,CYP11B1	1327,-43326,1327
chr2:172289787-172290254	chr2	+	172289912	172290296	True	NR_028482,NM_024770,NM_001164821,NM_025000	chr2,chr2,chr2,chr2	+,-,+,+	DCAF17,METTL8,DCAF17,DCAF17	464,1066,464,464
chr9:34663679-34665172	chr9	+	34663738	34664836	True	NM_147162,NM_006664,NM_004512	chr9,chr9,chr9	+,-,+	IL11RA,CCL27,IL11RA	-9857,-1049,-9857
chr3:101281349-101282295	chr3	+	101281651	101282343	True	NM_020654,NM_017819	chr3,chr3	-,+	SENP7,RG9MTD1	-49566,-993
chr16:328157-328815	chr16	+	328657	328843	True	NM_006849,NM_183337,NM_001176,NM_003834	chr16,chr16,chr16,chr16	+,-,+,-	PDIA2,RGS11,ARHGDIG,RGS11	4274,-2743,1762,-2743
chr20:30193335-30193542	chr20	+	30193359	30193539	True	NM_181353,NR_036161,NM_001191,NM_002165	chr20,chr20,chr20,chr20	+,+,-,+	ID1,MIR3193,BCL2L1,ID1	-318,1449,117167,-318
chr1:12959713-12961057	chr1	+	12959798	12961082	True	NM_001012276,NM_001039361	chr1,chr1	+,-	PRAMEF8,PRAMEF10	15367,-1704
chr1:12959713-12961057	chr1	-	13406147	13407430	False	NM_001012276,NM_001098376	chr1,chr1	-,+	PRAMEF8,PRAMEF15	-15382,13745
chr1:12959713-12961057	chr1	-	13626944	13628227	False	NM_001012276,NM_001098376	chr1,chr1	-,+	PRAMEF8,PRAMEF15	-15394,13745
chr6:41750387-41751310	chr6	+	41750447	41751181	True	NM_001134493,NM_013397,NM_006653	chr6,chr6,chr6	+,+,-	TOMM6,PRICKLE4,FRS3	3999,-1998,-2817
chr15:79576174-79576378	chr15	+	79576232	79576358	True	NM_001146341,NM_002891	chr15,chr15	+,-	ANKRD34C,RASGRF1	-1137,-193017
chr17:7479996-7480960	chr17	+	7480043	7480606	True	NM_001416,NM_004870,NR_002918,NM_001040059,NR_002912,NR_024603,NR_002604,NM_001251,NM_001204510,NM_006942	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,+,+,+,+,-	EIF4A1,MPDU1,SNORA48,CD68,SNORA67,MPDU1,SNORD10,CD68,EIF4A1,SOX15	-4070,6358,-2063,2199,666,6358,17,2198,-4070,12933
chr12:42742217-42743747	chr12	+	42742393	42743191	True	NM_016488,NM_033114	chr12,chr12	+,-	PPHLN1,ZCRB1	-22508,-22461
chr1:28426130-28427159	chr1	+	28426834	28427041	True	NR_027268,NM_016311	chr1,chr1	-,+	LOC653566,ATPIF1	-3765,135560
chr7:23532129-23533104	chr7	+	23532272	23532938	True	NM_006547,NR_026676	chr7,chr7	-,+	IGF2BP3,RPS2P32	-22277,-2322
chr11:114310545-114310790	chr11	+	114310557	114310805	True	NM_015523,NM_019021	chr11,chr11	+,-	REXO2,C11orf71	-500,-39418
chr10:81104697-81106558	chr10	+	81104722	81106171	True	NM_005729,NM_153367	chr10,chr10	+,-	PPIF,ZCCHC24	1048,99265
chrX:118600121-118601954	chrX	+	118600213	118601627	True	NM_001152,NR_028443	chrX,chrX	+,-	SLC25A5,LOC100303728	735,1506
chr11:18136071-18136503	chr11	+	18136084	18136227	True	NR_026576,NM_138421,NM_054031	chr11,chr11,chr11	-,-,+	SAA3P,SAAL1,MRGPRX3	1511,-8446,6274
chr1:153888475-153889040	chr1	+	153888789	153889057	True	NM_130898,NM_020699	chr1,chr1	+,-	CREB3L4,GATAD2B	51339,6444
chr11:123947228-123947797	chr11	+	123947248	123947828	True	NM_198315,NM_001004463	chr11,chr11	+,-	VWA5A,OR10G7	38282,-37540
chr11:95523523-95524162	chr11	+	95523577	95524037	True	NM_144664,NM_014679	chr11,chr11	-,+	FAM76B,CEP57	-623,-8
chr16:88877107-88877361	chr16	+	88877122	88877338	True	NM_000485,NM_001030018,NM_030928	chr16,chr16,chr16	-,-,+	APRT,APRT,CDT1	1054,1054,-6987
chr3:8811435-8812453	chr3	+	8811522	8812401	True	NM_001234,NM_000916	chr3,chr3	+,-	CAV3,OXTR	-36078,-222
chr15:99791957-99793006	chr15	+	99792129	99792913	True	NM_001040658,NM_001040659,NM_001040656,NM_001040657,NM_001040655,NM_144598,NM_022905,NM_001040660	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,-,-,-,+,-,-	TTC23,TTC23,TTC23,TTC23,TTC23,LRRC28,TTC23,TTC23	-2314,-2314,-2314,-2314,-2314,-535,-2314,-2314
chr6:39281622-39281859	chr6	+	39281623	39281906	True	NM_001135105,NM_032115,NM_001135107,NM_001135106,NM_001135111,NM_031460,NM_002062	chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,-,-,-,+	KCNK16,KCNK16,KCNK16,KCNK16,KCNK17,KCNK17,GLP1R	8474,8474,8474,8474,381,380,-265117
chr14:69618733-69618966	chr14	+	69618749	69618885	True	NM_003861,NM_001193360	chr14,chr14	-,+	DCAF5,EXD2	1079,39308
chr11:75274465-75274733	chr11	+	75274628	75274780	True	NM_030792,NM_001235	chr11,chr11	-,+	GDPD5,SERPINH1	-38029,-1509
chr21:45682542-45682811	chr21	+	45682769	45682849	True	NM_000383,NM_175867,NM_013369	chr21,chr21,chr21	+,-,-	AIRE,DNMT3L,DNMT3L	22913,-670,-670
chr20:31618826-31619567	chr20	+	31618910	31619564	True	NM_080675,NM_174897	chr20,chr20	-,+	SUN5,BPIL3	-26671,111
chrX:48326110-48326621	chrX	+	48326145	48326564	True	NM_012280,NM_033518,NM_177439,NM_177434	chrX,chrX,chrX,chrX	+,-,+,+	FTSJ1,SLC38A5,FTSJ1,FTSJ1	7984,2137,7984,9815
chr15:67438072-67439534	chr15	+	67438127	67439438	True	NM_001145103,NM_024666	chr15,chr15	+,-	SMAD3,AAGAB	-7819,107687
chr12:49091228-49092661	chr12	+	49091823	49092400	True	NR_024266,NR_029448	chr12,chr12	-,+	LOC144438,LOC255411	-5594,28817
chr16:2200092-2200507	chr16	+	2200180	2200540	True	NR_002736,NM_014353,NM_032271	chr16,chr16,chr16	-,+,+	SNORD60,RAB26,TRAF7	4616,-1580,5258
chr2:109065710-109066131	chr2	+	109065916	109066180	True	NR_028063,NM_022336,NM_181453	chr2,chr2,chr2	+,-,+	GCC2,EDAR,GCC2	-390,539698,-390
chr21:27915552-27916013	chr21	+	27915759	27915949	True	NM_002040,NM_052954	chr21,chr21	+,-	GABPA,CYYR1	-808481,29682
chr22:41941083-41941885	chr22	+	41941336	41941928	True	NM_001018050,NM_001018052,NM_014460,NM_138338	chr22,chr22,chr22,chr22	-,-,+,-	POLR3H,POLR3H,CSDC2,POLR3H	-857,-857,15085,-860
chr15:41835982-41836518	chr15	+	41836043	41836563	True	NM_015540,NM_006293	chr15,chr15	-,+	RPAP1,TYRO3	-49,14656
chr1:187297244-187297548	chr1	+	187297413	187297560	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-647854,-499437
chr20:57763955-57764725	chr20	+	57764405	57764541	True	NR_037930,NM_178457	chr20,chr20	-,+	SLMO2-ATP5E,ZNF831	-146504,1533
chr5:780717-780962	chr5	+	780716	780936	True	NM_001166260,NM_024786	chr5,chr5	+,-	TRIP13,ZDHHC11	112032,70215
chr5:780717-780962	chr5	+	688327	688877	False	NM_018140,NM_007030	chr5,chr5	+,-	CEP72,TPPP	-76307,4683
chr10:50734750-50735643	chr10	+	50734829	50735426	True	NM_020984,NM_170753	chr10,chr10	+,-	CHAT,PGBD3	81714,-2470
chr1:15800028-15800891	chr1	+	15800273	15800517	True	NM_015849,NM_001229	chr1,chr1	+,-	CELA2B,CASP9	2078,50473
chr11:51410532-51411676	chr11	+	51410913	51411703	True	NM_001004703,NM_001005272	chr11,chr11	+,-	OR4C46,OR4A5	103578,795
chr7:27170020-27170230	chr7	+	27170083	27170179	True	NM_002141,NM_153631,NR_002795	chr7,chr7,chr7	-,-,+	HOXA4,HOXA3,HOXA11-AS1	270,-3444,54847
chr17:46688463-46688817	chr17	+	46688482	46688866	True	NM_004502,NM_024016,NM_018952,NR_033205	chr17,chr17,chr17,chr17	-,-,-,+	HOXB7,HOXB8,HOXB6,LOC404266	-99,3485,-6148,-15221
chr1:164528714-164529034	chr1	+	164528718	164529027	True	NM_002585,NM_001174069,NM_001204963,NM_001204961	chr1,chr1,chr1,chr1	+,-,+,+	PBX1,LMX1A,PBX1,PBX1	-172,796501,-172,-172
chr5:124146016-124146321	chr5	+	124146027	124146335	True	NM_004384,NM_020747	chr5,chr5	+,-	CSNK1G3,ZNF608	-1298285,-65222
chr15:27006464-27007072	chr15	+	27006576	27006971	True	NM_000814,NM_000810	chr15,chr15	-,+	GABRB3,GABRA5	11303,104894
chr17:26657956-26658677	chr17	+	26658070	26658633	True	NM_174887,NM_021137	chr17,chr17	-,+	IFT20,TNFAIP1	3913,3914
chr3:30936186-30936573	chr3	+	30936225	30936569	True	NM_207359,NM_003242	chr3,chr3	-,+	GADL1,TGFBR2	-72,-288282
chr7:105308068-105308839	chr7	+	105308164	105308682	True	NM_138495,NM_021930	chr7,chr7	-,+	ATXN7L1,RINT1	10987,-135693
chr12:75785136-75785859	chr12	+	75785141	75785826	True	NM_152436,NM_032606	chr12,chr12	+,-	GLIPR1L2,CAPS2	-303,-61305
chr5:132073167-132073445	chr5	+	132073178	132073442	True	NM_007054,NM_001039780	chr5,chr5	-,+	KIF3A,CCNI2	-37,9694
chr6:33380538-33381217	chr6	+	33380671	33381097	True	NM_002636,NM_001014838,NM_006772,NM_001014433,NM_001014837,NM_001014840,NM_024165,NR_027692,NM_015921	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	+,-,+,-,-,-,+,+,-	PHF1,CUTA,SYNGAP1,CUTA,CUTA,CUTA,PHF1,PHF1,CUTA	-1949,5018,6749,5018,5018,5018,-1949,-1949,5018
chr6:33380538-33381217	chr6_ssto_hap7	+	4860919	4861345	False	NM_002636,NM_001014838,NM_006772,NM_001014433,NM_001014837,NM_001014840,NM_024165,NR_027692	chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7	+,-,+,-,-,-,+,+	PHF1,CUTA,SYNGAP1,CUTA,CUTA,CUTA,PHF1,PHF1	-1949,5016,6747,5016,5016,5016,-1949,-1949
chr10:99348835-99349923	chr10	+	99348915	99349899	True	NM_001009997,NM_178832,NM_001134670,NM_138413	chr10,chr10,chr10,chr10	+,-,+,+	C10orf62,MORN4,HOGA1,HOGA1	-102,43495,-4864,-4864
chr10:120962611-120963562	chr10	+	120962722	120963595	True	NM_005308,NM_014098	chr10,chr10	+,-	GRK5,PRDX3	3601,-24377
chr17:17349009-17349667	chr17	+	17349125	17349655	True	NM_018019,NM_001199989	chr17,chr17	+,-	MED9,RASD1	30644,50104
chr10:104264963-104266226	chr10	+	104264968	104266052	True	NM_001178133,NM_005736,NM_016169	chr10,chr10,chr10	+,-,+	SUFU,ACTR1A,SUFU	-1304,-2456,-1304
chr11:116691855-116692437	chr11	+	116692030	116692230	True	NM_000482,NM_000040	chr11,chr11	-,+	APOA4,APOC3	1831,8393
chr15:93634900-93635239	chr15	+	93634983	93635276	True	NM_001166287,NM_020211,NR_036136	chr15,chr15,chr15	-,-,+	RGMA,RGMA,MIR3175	-3231,-2540,-187405
chr12:28126940-28127274	chr12	+	28126944	28127288	True	NM_020782,NM_002820,NM_198966,NM_198964,NM_198965	chr12,chr12,chr12,chr12,chr12	+,-,-,-,-	KLHDC5,PTHLH,PTHLH,PTHLH,PTHLH	-193815,-2028,-4050,-4050,-2028
chr14:94422474-94423182	chr14	+	94422573	94423151	True	NM_016150,NM_138344	chr14,chr14	-,+	ASB2,FAM181A	666,-37369
chr20:62524630-62524938	chr20	+	62524635	62524786	True	NM_025219,NR_031735	chr20,chr20	+,-	DNAJC5,MIR1914	1668,48170
chr1:169860470-169862122	chr1	+	169860487	169862152	True	NM_020423,NM_018186,NM_181093	chr1,chr1,chr1	-,+,-	SCYL3,C1orf112,SCYL3	974,-95989,974
chr3:180635656-180637279	chr3	+	180635843	180636920	True	NM_005087,NM_001190233,NM_001013438,NM_001013439	chr3,chr3,chr3,chr3	+,-,+,+	FXR1,DNAJC19,FXR1,FXR1	-5667,70444,-5667,-5667
chr1:91487751-91488179	chr1	+	91487777	91488199	True	NM_016620,NM_001134419,NM_201269,NM_032186	chr1,chr1,chr1,chr1	-,+,-,-	ZNF644,CDC7,ZNF644,ZNF644	-747,478204,-106,-106
chr6:168474519-168474897	chr6	+	168474618	168474882	True	NM_030615,NM_001122841,NM_024919	chr6,chr6,chr6	+,-,-	KIF25,FRMD1,FRMD1	-56116,1700,5007
chr9:112081728-112082082	chr9	+	112081740	112082052	True	NM_018424,NM_019114,NM_001037293	chr9,chr9,chr9	-,-,+	EPB41L4B,EPB41L4B,PALM2	1021,1021,321015
chr11:74697739-74698712	chr11	+	74697924	74698437	True	NM_006656,NM_182969	chr11,chr11	+,-	NEU3,XRRA1	1512,-37692
chr18:7229055-7230033	chr18	+	7229163	7229741	True	NM_005559,NM_001105581	chr18,chr18	-,+	LAMA1,LRRC30	-111350,1395
chr10:115615099-115615348	chr10	+	115615098	115615227	True	NM_198514,NM_014881	chr10,chr10	+,-	NHLRC2,DCLRE1A	-758,-1239
chr19:11589674-11590094	chr19	+	11589679	11589993	True	NM_032281,NM_001420,NM_002743	chr19,chr19,chr19	-,-,+	ELAVL3,ELAVL3,PRKCSH	1860,1860,-43461
chr22:37172127-37172643	chr22	+	37172306	37172642	True	NM_001177701,NR_033531,NM_006860,NM_000631,NM_001177702	chr22,chr22,chr22,chr22,chr22	-,-,-,+,-	IFT27,IFT27,IFT27,NCF4,IFT27	-134,-134,-134,84387,-8232
chr1:205013849-205014317	chr1	+	205013854	205014316	True	NM_203376,NM_005076	chr1,chr1	-,+	TMEM81,CNTN2	39322,-1565
chr1:155110125-155111020	chr1	+	155110230	155110898	True	NM_004428,NM_018973,NM_153741,NM_018845,NM_001122839,NM_001122837,NM_182685	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,+,+,+,+	EFNA1,DPM3,DPM3,SLC50A1,SLC50A1,SLC50A1,EFNA1	-9932,2035,2148,-1993,-1993,-1993,-9932
chr15:45926228-45926814	chr15	+	45926493	45926769	True	NM_021199,NM_013309	chr15,chr15	+,-	SQRDL,SLC30A4	486,-111491
chr15:28567510-28567860	chr15	+	28567540	28567834	True	NM_004667,NR_033351	chr15,chr15	-,+	HERC2,GOLGA8F	-245,55949
chr15:28567510-28567860	chr15	-	28834144	28834338	False	NR_036443,NR_033351	chr15,chr15	+,-	HERC2P9,GOLGA8F	65249,-56001
chr15:28567510-28567860	chr15	+	20711848	20711962	False	NR_036432,NR_027411	chr15,chr15	-,+	HERC2P3,GOLGA8C	-415,55711
chr15:28567510-28567860	chr15	+	23378640	23378754	False	NR_002824,NR_036470	chr15,chr15	-,+	HERC2P2,HERC2P7	-381,11967
chr5:53812831-53813396	chr5	+	53812838	53813394	True	NM_052870,NM_001145427,NM_019087,NM_001102575	chr5,chr5,chr5,chr5	+,+,-,+	SNX18,SNX18,ARL15,SNX18	198,194,-206435,198
chrX:15391348-15392025	chrX	+	15391351	15391990	True	NM_004469,NM_203281	chrX,chrX	-,+	FIGF,BMX	10597,126909
chr17:61519178-61519382	chr17	+	61519221	61519363	True	NM_001017917,NM_001017916,NM_000789,NM_001915	chr17,chr17,chr17,chr17	-,-,+,-	CYB561,CYB561,ACE,CYB561	-1014,4232,35058,4409
chr10:102988149-102988538	chr10	+	102988282	102988490	True	NM_006562,NR_029380	chr10,chr10	-,+	LBX1,FLJ41350	277,860
chr19:56706992-56707511	chr19	+	56707012	56707144	True	NM_033106,NM_001080456	chr19,chr19	+,-	GALP,ZSCAN5B	-19674,-2591
chr18:64252803-64253337	chr18	+	64252827	64253384	True	NM_004361,NM_021153	chr18,chr18	+,-	CDH7,CDH19	-834736,17889
chr11:69454800-69455026	chr11	+	69454824	69455052	True	NM_153451,NM_053056	chr11,chr11	-,+	ORAOV1,CCND1	35163,820
chr11:107992710-107993715	chr11	+	107992976	107993614	True	NM_000019,NM_002519	chr11,chr11	+,-	ACAT1,NPAT	-769,99811
chr9:26952433-26953101	chr9	+	26952624	26953127	True	NM_001099224,NM_001031689,NM_025103,NM_001099223,NM_001099222	chr9,chr9,chr9,chr9,chr9	+,-,+,+,+	IFT74,PLAA,IFT74,IFT74,IFT74	3243,-5156,3243,-5640,-5367
chr3:38689999-38690313	chr3	+	38690020	38690296	True	NM_001160161,NM_001160160,NM_000335,NM_001099405,NM_001099404,NM_005107,NM_198056	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,-,+,-	SCN5A,SCN5A,SCN5A,SCN5A,SCN5A,EXOG,SCN5A	918,918,917,917,917,-152308,917
chr12:57981449-57982590	chr12	+	57981580	57982400	True	NM_001146259,NM_001146258,NM_024779,NM_001146260,NM_006400	chr12,chr12,chr12,chr12,chr12	+,+,+,+,-	PIP4K2C,PIP4K2C,PIP4K2C,PIP4K2C,DCTN2	2541,2541,2541,2541,-40602
chrX:152683518-152684739	chrX	+	152683665	152684738	True	NM_001136273,NM_080701	chrX,chrX	+,-	ZFP92,TREX2	65,27258
chr1:221915284-221915516	chr1	+	221915288	221915546	True	NM_021958,NM_144729,NM_144728,NM_007207	chr1,chr1,chr1,chr1	+,-,-,-	HLX,DUSP10,DUSP10,DUSP10	-862598,20,-4486,20
chr9:130641210-130642279	chr9	+	130641415	130642005	True	NM_000476,NM_001018078	chr9,chr9	-,+	AK1,FPGS	-1393,-75965
chr17:43695630-43696191	chr17_ctg5_hap1	+	561604	562037	False	NM_001193465,NR_034172	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	KIAA1267,LOC644246	1460,33399
chr17:43695630-43696191	chr17_ctg5_hap1	-	1171874	1172369	False	NR_026680,NR_026901,NR_037772,NR_027295	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	-,+,-,-	MGC57346,LOC644172,CRHR1,MGC57346	-1423,16069,-1421,-1692
chr17:43695630-43696191	chr17	+	43695799	43696239	True	NR_026680,NR_026901,NR_037772,NR_027295	chr17,chr17,chr17,chr17	+,-,+,+	MGC57346,LOC644172,CRHR1,MGC57346	1472,-16051,1470,1741
chr17:43695630-43696191	chr17	-	44304166	44304645	False	NM_001193465,NR_034172	chr17,chr17	-,+	KIAA1267,LOC644246	-1426,-33329
chr1:9131391-9131601	chr1	+	9131484	9131568	True	NM_001215,NM_003039,NM_001135585	chr1,chr1,chr1	+,-,-	CA6,SLC2A5,SLC2A5	-125620,-1597,-1597
chrX:73162705-73163374	chrX	+	73162728	73163284	True	NR_001564,NR_024582	chrX,chrX	-,+	XIST,NCRNA00183	-90140,874
chr12:56123991-56125442	chr12	+	56124049	56124569	True	NM_002905,NM_001780,NM_001199771,NM_001040034	chr12,chr12,chr12,chr12	+,-,+,-	RDH5,CD63,RDH5,CD63	-9949,-1139,-9949,-1139
chr6:117912308-117912936	chr6	+	117912367	117912853	True	NM_138459,NM_001017408	chr6,chr6	+,-	NUS1,GOPC	83763,10904
chr12:52967675-52969105	chr12	+	52967820	52968995	True	NM_175053,NM_002284	chr12,chr12	-,+	KRT74,KRT86	-211,-272229
chr1:110230997-110231235	chr1	+	110231055	110231181	True	NM_000561,NM_000849,NM_146421	chr1,chr1,chr1	+,-,+	GSTM1,GSTM3,GSTM1	-688,52529,-688
chr1:110230997-110231235	chr1	+	110199673	110199723	False	NM_000850,NM_147148,NR_024538,NM_005272	chr1,chr1,chr1,chr1	+,+,+,-	GSTM4,GSTM4,GSTM4,GNAT2	-1026,-1026,-1026,-43968
chr5:126113426-126113627	chr5	+	126113431	126113595	True	NM_005573,NM_001198557,NM_001202404	chr5,chr5,chr5	+,+,-	LMNB1,LMNB1,ALDH7A1	-1167,-637,-182349
chr3:130546528-130546813	chr3	+	130546582	130546752	True	NM_014602,NM_001199181	chr3,chr3	-,+	PIK3R4,ATP2C1	-80886,22616
chr3:11883406-11884090	chr3	+	11883434	11883570	True	NM_138807,NM_003178	chr3,chr3	-,+	C3orf31,SYN2	4832,162291
chr9:140099438-140099739	chr9	+	140099437	140099731	True	NM_001144028,NM_001128228,NM_001144026,NM_001144027,NM_053045,NM_014434	chr9,chr9,chr9,chr9,chr9,chr9	+,-,+,+,-,+	NDOR1,TPRN,NDOR1,NDOR1,TMEM203,NDOR1	387,-4274,387,387,409,387
chr2:113404059-113404659	chr2	+	113404154	113404702	True	NR_033871,NM_005415	chr2,chr2	-,+	FLJ42351,SLC20A1	-2397,-771
chr1:168698283-168698827	chr1	+	168698304	168698858	True	NR_024160,NM_001937	chr1,chr1	+,-	MGC4473,DPT	57320,-2
chr14:78227823-78228376	chr14	+	78227826	78228236	True	NM_174943,NM_001173978,NM_012245	chr14,chr14,chr14	+,+,-	C14orf178,C14orf178,SNW1	-707,-707,-329
chr5:53628765-53630546	chr5	+	53628797	53630585	True	NM_006308,NM_019087	chr5,chr5	+,-	HSPB3,ARL15	120845,-22394
chr17:8337656-8338109	chr17	+	8337856	8338035	True	NM_030808,NM_001146684,NM_001025579	chr17,chr17,chr17	+,-,+	NDEL1,RNF222,NDEL1	1143,-36712,1143
chr12:55355516-55356784	chr12	+	55355662	55356762	True	NM_001098815,NM_021191	chr12,chr12	-,+	KIAA0748,NEUROD4	18910,56966
chr1:204165822-204166744	chr1	+	204165951	204166563	True	NM_005686,NM_002256	chr1,chr1	+,-	SOX13,KISS1	-123756,-332
chr13:79175031-79175672	chr13	+	79175150	79175669	True	NM_006237,NM_144595	chr13,chr13	-,+	POU4F1,SLAIN1	2076,-859907
chr20:62329310-62329727	chr20	+	62329476	62329708	True	NM_032527,NM_003823,NM_003224,NM_001195653,NM_001195654,NM_181485,NM_001134758,NM_001083113	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,+,-,+,+,+,-,+	ZGPAT,TNFRSF6B,ARFRP1,ZGPAT,ZGPAT,ZGPAT,ARFRP1,ZGPAT	9671,-1523,9697,9671,9671,9671,9697,9085
chr6:41129341-41130805	chr6	+	41129450	41130459	True	NM_018965,NR_026938,NM_178174	chr6,chr6,chr6	-,+,-	TREM2,LOC221442,TREML1	514,-60728,-7380
chr6:88295422-88296269	chr6	+	88295614	88296308	True	NM_020320,NM_181837,NM_012381,NM_001197259	chr6,chr6,chr6,chr6	-,+,+,+	RARS2,ORC3,ORC3,ORC3	3479,3476,3476,3476
chr12:49179208-49180304	chr12	+	49179454	49180158	True	NM_000725,NM_020983,NM_015270	chr12,chr12,chr12	+,-,-	CACNB3,ADCY6,ADCY6	32353,2712,-1577
chr2:70781570-70782008	chr2	+	70781623	70782051	True	NM_001099691,NM_016297,NM_003236	chr2,chr2,chr2	-,+,-	TGFA,PCYOX1,TGFA	-518,-296443,-518
chr16:50406868-50408316	chr16	+	50407099	50408287	True	NM_001114,NM_013263,NM_001173984	chr16,chr16,chr16	+,-,-	ADCY7,BRD7,BRD7	-85327,-4254,-4254
chr13:41550974-41551265	chr13	+	41550982	41551305	True	NM_007187,NM_001145353	chr13,chr13	+,-	WBP4,ELF1	84391,5168
chr1:43425712-43426132	chr1	+	43425723	43426109	True	NR_033967,NM_006516	chr1,chr1	+,-	FLJ32224,SLC2A1	-1061,-876
chr21:31982205-31984102	chr21	+	31982819	31983746	True	NM_181620,NR_023342,NM_181615,NM_181602	chr21,chr21,chr21,chr21	+,+,+,-	KRTAP22-1,KRTAP20-4,KRTAP20-1,KRTAP6-1	-9439,9199,5027,2528
chr6:14950058-14951576	chr6	+	14950161	14951533	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	294993,711806
chr14:77785344-77786931	chr14	+	77785406	77786540	True	NM_001513,NM_145870,NM_145871,NM_013382	chr14,chr14,chr14,chr14	+,+,+,-	GSTZ1,GSTZ1,GSTZ1,POMT2	1165,689,689,735
chr19:54878254-54879070	chr19	+	54878416	54879012	True	NM_002287,NM_021706,NM_001005367	chr19,chr19,chr19	-,-,+	LAIR1,LAIR1,TTYH1	-1695,-1695,47592
chr2:202506553-202507360	chr2	+	202506759	202507235	True	NM_152388,NM_001044385,NM_139158	chr2,chr2,chr2	-,-,+	ALS2CR4,ALS2CR4,CDK15	225,1039,163962
chr14:39740940-39741277	chr14	+	39740945	39741283	True	NM_005930,NM_203355,NM_203356,NM_177452,NM_203354	chr14,chr14,chr14,chr14,chr14	+,+,+,-,+	CTAGE5,CTAGE5,CTAGE5,TRAPPC6B,CTAGE5	-4668,-4668,-5494,-101311,-6520
chr10:105611726-105612911	chr10	+	105611795	105612919	True	NM_014631,NM_014720	chr10,chr10	-,+	SH3PXD2A,SLK	2295,114550
chr12:125812481-125813492	chr12	+	125812639	125813529	True	NM_032656,NM_052907	chr12,chr12	-,+	DHX37,TMEM132B	-338972,-1535
chr13:99293506-99294249	chr13	+	99293510	99294253	True	NM_001032296,NR_036129	chr13,chr13	-,+	STK24,MIR3170	-64114,-432783
chr2:240970335-240971263	chr2	+	240970452	240971277	True	NM_001005853,NR_037808,NM_004544	chr2,chr2,chr2	-,+,-	OR6B2,LOC150935,NDUFA10	-606,-285949,-5633
chr15:96877018-96877242	chr15	+	96877101	96877179	True	NR_031715,NM_001145156,NM_001145155,NM_001145157,NR_034095,NM_021005	chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,-,+	MIR1469,NR2F2,NR2F2,NR2F2,LOC400456,NR2F2	-662,-1358,-7995,-583,-1006772,-3041
chr12:104321885-104323199	chr12	+	104322068	104323096	True	NM_003299,NR_037425,NR_027249	chr12,chr12,chr12	+,+,-	HSP90B1,MIR3652,GNN	1092,1106,943
chr19:38795520-38796078	chr19	+	38795624	38796036	True	NM_033557,NM_033520	chr19,chr19	-,+	YIF1B,C19orf33	4523,-871
chr4:701920-702426	chr4	+	701929	702277	True	NM_006315,NM_032219	chr4,chr4	+,-	PCGF3,MFSD7	-2407,-18956
chr11:114395673-114396197	chr11	+	114395685	114396155	True	NM_015523,NM_152315	chr11,chr11	+,-	REXO2,FAM55A	-85636,34475
chr19:1041451-1041760	chr19	+	1041679	1041775	True	NM_033420,NM_019112	chr19,chr19	-,+	C19orf6,ABCA7	-20538,-1628
chr12:120909572-120911420	chr12	+	120909703	120910965	True	NM_001037494,NM_003769	chr12,chr12	+,-	DYNLL1,SRSF9	-2105,-2145
chr6:154402563-154403056	chr6	+	154402719	154403071	True	NM_001130699,NM_001145287	chr6,chr6	-,+	IPCEF1,OPRM1	248194,4570
chr5:140174968-140175905	chr5	+	140174992	140175704	True	NM_031497,NM_031410,NM_031411,NM_002109,NM_031495,NM_018900,NM_018906,NM_018905	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,-,+,+,+,+	PCDHA3,PCDHA1,PCDHA1,HARS,PCDHA2,PCDHA1,PCDHA3,PCDHA2	5078,-9169,-9169,-104021,-601,-9169,5078,-601
chr10:104179217-104179526	chr10	+	104179256	104179504	True	NM_024326,NM_002779	chr10,chr10	+,-	FBXL15,PSD	66,-355
chr17:40923374-40923945	chr17	+	40923536	40923720	True	NR_024462,NM_032353,NM_032387	chr17,chr17,chr17	-,+,+	LOC100190938,VPS25,WNK4	-10261,1733,8928
chr12:133402687-133403246	chr12	+	133402693	133403291	True	NM_001172557,NM_005895,NM_001170544	chr12,chr12,chr12	-,-,+	GOLGA3,GOLGA3,PGAM5	2185,2047,-115351
chrY:4870251-4870927	chrY	+	4870367	4870858	True	NM_032971,NR_001540	chrY,chrY	+,-	PCDH11Y,TTTY23	-2151,1240843
chr9:139658736-139659077	chr9	+	139658838	139659082	True	NM_178469,NM_203347,NR_033913	chr9,chr9,chr9	-,-,+	LCN8,LCN15,LOC100128593	-6107,-59,-18276
chr12:57624528-57625546	chr12	+	57624533	57625461	True	NM_005412,NM_020142,NR_029415,NR_029416,NR_029417,NM_001166358,NM_001166359,NM_001166356,NM_001166357	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,-,+,+,+,+,+,+,+	SHMT2,NDUFA4L2,SHMT2,SHMT2,SHMT2,SHMT2,SHMT2,SHMT2,SHMT2	-1228,9064,-473,-756,-1228,-756,-473,-1228,-441
chr6:109107785-109108219	chr6	+	109107791	109108125	True	NR_033376,NM_001199934	chr6,chr6	+,-	NCRNA00222,SESN1	-34985,222116
chr1:21669567-21670991	chr1	+	21669785	21670950	True	NM_032264,NM_001113348	chr1,chr1	+,-	NBPF3,ECE1	95680,1134
chrX:109665020-109666275	chrX	+	109665075	109666160	True	NM_020769,NM_001171689	chrX,chrX	+,-	RGAG1,AMMECR1	-2841,17352
chr12:57826221-57826573	chr12	+	57826342	57826423	True	NM_005538,NM_001080156	chr12,chr12	+,-	INHBC,ARHGAP9	2119,45366
chr4:164434573-164436548	chr4	+	164434608	164436518	True	NM_032136,NM_018352	chr4,chr4	-,+	TKTL2,C4orf43	-39561,-18987
chr19:19627255-19627498	chr19	+	19627259	19627532	True	NM_032037,NM_015965	chr19,chr19	-,+	TSSK6,NDUFA13	-790,-292
chr3:138666238-138666730	chr3	+	138666265	138666695	True	NM_001040061,NM_023067	chr3,chr3	+,-	C3orf72,FOXL2	-240,-283
chr19:9785113-9785317	chr19	+	9785255	9785353	True	NM_001048241,NM_017656,NM_001130032,NM_001130031	chr19,chr19,chr19,chr19	+,-,-,-	UBL5,ZNF562,ZNF562,ZNF562	153214,473,473,473
chr3:184033946-184034291	chr3	+	184033946	184034322	True	NM_004953,NM_198244,NM_198242,NM_198241,NM_001194946,NM_001194947,NM_001171087,NR_003055,NM_182917	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,+,+,-,+,+	EIF4G1,EIF4G1,EIF4G1,EIF4G1,EIF4G1,EIF4G1,CLCN2,SNORD66,EIF4G1	3778,-1714,-1714,-1714,-1714,-1714,45119,9161,-1045
chr17:33309520-33310473	chr17	+	33309685	33310403	True	NM_006584,NM_013975,NM_002311	chr17,chr17,chr17	-,+,+	CCT6B,LIG3,LIG3	-21157,-2235,-2235
chr11:64570898-64571099	chr11	+	64571022	64571124	True	NM_004579,NM_006244,NM_130799,NM_000244,NM_130804,NM_130803,NM_130802,NM_130801,NM_130800	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,+,-,-,-,-,-,-,-	MAP4K2,PPP2R5B,MEN1,MEN1,MEN1,MEN1,MEN1,MEN1,MEN1	-309,121018,7114,7114,7692,7692,7139,6961,6961
chr1:9598942-9599318	chr1	+	9599070	9599222	True	NR_027045,NM_032315	chr1,chr1	-,+	C1orf200,SLC25A33	115480,305
chr20:38809302-38810141	chr20	+	38809437	38810081	True	NM_003286,NM_005461	chr20,chr20	+,-	TOP1,MAFB	847380,507845
chr20:38735614-38737140	chr20	+	38735701	38736884	True	NM_003286,NM_005461	chr20,chr20	+,-	TOP1,MAFB	920577,581042
chr9:125019633-125020638	chr9	+	125019761	125020386	True	NM_033117,NM_138777,NR_027126,NM_001173512,NR_027125	chr9,chr9,chr9,chr9,chr9	-,+,-,+,-	RBM18,MRRF,RBM18,MRRF,RBM18	6807,6495,6807,6495,6807
chr10:86087682-86088235	chr10	+	86087710	86088122	True	NM_018999,NM_015613	chr10,chr10	+,-	FAM190B,LRIT1	287,-86493
chrX:138290575-138291591	chrX	+	138290702	138291626	True	NR_028597,NM_001139501,NM_001139500,NM_001139498	chrX,chrX,chrX,chrX	+,-,-,-	SRD5A1P1,FGF13,FGF13,FGF13	237351,-3517,-3517,-3517
chr6:166753270-166754859	chr6	+	166753309	166754571	True	NM_145169,NR_027284	chr6,chr6	-,+	SFT2D1,LOC441177	1472,-352321
chr15:62457598-62458806	chr15	+	62457833	62458830	True	NM_001007595,NM_207322	chr15,chr15	-,+	C2CD4B,C2CD4A	-351,-98708
chrX:85302348-85304003	chrX	+	85302478	85303885	True	NM_001145414,NM_001139514,NM_000390	chrX,chrX,chrX	-,+,-	CHM,DACH2,CHM	88,99569,88
chr18:72927238-72928836	chr18	+	72927271	72928635	True	NM_005786,NM_175907	chr18,chr18	+,-	TSHZ1,ZADH2	-4592,-5990
chr1:110083915-110084434	chr1	+	110084041	110084307	True	NM_006496,NM_031936,NM_020703	chr1,chr1,chr1	+,+,-	GNAI3,GPR61,AMIGO1	6878,-1611,-31705
chr12:6978067-6978784	chr12	+	6978248	6978810	True	NM_032641,NM_000365,NM_001146316,NR_027483,NM_001159287	chr12,chr12,chr12,chr12,chr12	-,+,-,+,+	SPSB2,TPI1,SPSB2,TPI1,TPI1	3761,-1606,3689,-1021,-1715
chr3:114864532-114865459	chr3	+	114864788	114865110	True	NM_001130064,NM_015642	chr3,chr3	+,-	GAP43,ZBTB20	477040,1067
chr7:142633562-142633983	chr7	+	142633615	142633977	True	NM_178829,NM_019841	chr7,chr7	+,-	C7orf34,TRPV5	2625,-2795
chr17:75135877-75136247	chr17	+	75135900	75136168	True	NR_036200,NM_001039573,NM_003003,NM_001143999,NM_001143998	chr17,chr17,chr17,chr17,chr17	-,+,+,+,+	MIR4316,SEC14L1,SEC14L1,SEC14L1,SEC14L1	257026,836,836,836,836
chr1:116309358-116310984	chr1	+	116309618	116311000	True	NM_001232,NM_001172412	chr1,chr1	-,+	CASQ2,VANGL1	476,-124419
chr8:86017483-86019268	chr8	+	86017902	86019198	True	NM_001099670,NM_033402	chr8,chr8	-,+	C8orf59,LRRCC1	113495,124
chr7:6543363-6543595	chr7	+	6543447	6543549	True	NM_006854,NM_001134387	chr7,chr7	-,+	KDELR2,ZDHHC4	-19598,73515
chr13:98111831-98113222	chr13	+	98112237	98113223	True	NM_080818,NM_021033	chr13,chr13	-,+	OXGR1,RAP2A	-465633,-25821
chr8:94728565-94730231	chr8	+	94729076	94730217	True	NM_145269,NR_033858	chr8,chr8	+,-	FAM92A1,LOC642924	-16365,-16415
chr19:55693746-55694094	chr19	+	55693910	55694030	True	NM_032430,NM_003180	chr19,chr19	+,-	BRSK1,SYT5	101503,-2190
chr17:48475317-48476833	chr17	+	48475360	48476032	True	NM_152463,NM_018509	chr17,chr17	+,-	EME1,LRRC59	-24830,-446
chr6:33280934-33281210	chr6_qbl_hap6	+	4513230	4513342	False	NM_001145338,NM_001350,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	4674,9750,9750,-23626,4467,1118,1118,1118,9750
chr6:33280934-33281210	chr6_mcf_hap5	+	4754726	4754838	False	NM_001145338,NM_001350,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	4674,9747,9747,-23621,4467,1118,1118,1118,9747
chr6:33280934-33281210	chr6_cox_hap2	+	4724796	4724908	False	NM_001145338,NM_001350,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	4676,9753,9753,-23621,4469,1118,1118,1118,9753
chr6:33280934-33281210	chr6	+	33280984	33281096	True	NM_001145338,NM_001350,NR_024517,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	4673,9747,9747,9747,-23623,4466,1118,1118,1118,9747
chr6:33280934-33281210	chr6_dbb_hap3	+	4562307	4562419	False	NM_001145338,NM_001350,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	4674,9751,9751,-23620,4467,1118,1118,1118,9751
chr3:9404141-9404729	chr3	+	9404323	9404729	True	NM_001114092,NM_015453,NR_027007	chr3,chr3,chr3	+,+,-	THUMPD3,THUMPD3,LOC440944	-13,-13,34495
chrX:52387241-52388845	chrX	+	52387367	52388806	True	NM_130777,NM_001097592,NM_001079538	chrX,chrX,chrX	-,+,-	XAGE2,XAGE1A,XAGE2B	-271,122954,-1351
chrX:52387241-52388845	chrX	-	52110367	52111806	False	NR_033251,NM_130777,NM_001079538	chrX,chrX,chrX	-,+,+	XAGE1C,XAGE2,XAGE2B	148398,271,1351
chr9:137966496-137967002	chr9	+	137966808	137966908	True	NM_014279,NM_006334,NM_002003	chr9,chr9,chr9	+,+,-	OLFM1,OLFM1,FCN1	180,194,-157002
chr16:56658768-56658989	chr16	+	56658871	56659017	True	NM_175617,NM_176870,NR_001447,NM_005950	chr16,chr16,chr16,chr16	+,+,+,-	MT1E,MT1M,MT1L,MT1G	567,7516,-7549,43010
chr7:30792315-30792645	chr7	+	30792422	30792566	True	NM_001202481,NM_006774,NR_037598,NM_001199219	chr7,chr7,chr7,chr7	-,+,+,+	CRHR2,INMT,INMT-FAM188B,INMT	-52703,-722,-722,-722
chr11:66794037-66795340	chr11	+	66794036	66795356	True	NM_177963,NM_001040716,NM_001177880	chr11,chr11,chr11	+,-,+	SYT12,PC,SYT12	-3274,-68189,-3900
chr16:1034112-1034320	chr16	+	1034121	1034269	True	NR_033645,NM_014587,NR_036442	chr16,chr16,chr16	-,+,-	LMF1,SOX8,LMF1	-2803,-2364,-2803
chr7:45131145-45131860	chr7	+	45131329	45131905	True	NM_001146334,NM_001029835	chr7,chr7	-,+	NACAD,CCM2	-2836,-64156
chr6:78494463-78494705	chr6	+	78494539	78494725	True	NM_000863,NM_001010844	chr6,chr6	-,+	HTR1B,IRAK1BP1	-321419,1082463
chr9:46274263-46274502	chr9	+	46274264	46274450	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2643534,413115
chr9:46274263-46274502	chr9	+	67683181	67683354	False	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	111008,243406
chr9:46274263-46274502	chr9	-	47166091	47166141	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-3535361,-478576
chr9:46274263-46274502	chr9	-	45108869	45109055	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-118684,-1478139
chr19:42933270-42934039	chr19	+	42933881	42934044	True	NM_001410,NM_005357	chr19,chr19	+,-	MEGF8,LIPE	-104172,-2303
chr12:100675893-100677376	chr12	+	100676464	100677353	True	NM_017988,NM_152317	chr12,chr12	+,-	SCYL2,DEPDC4	-14973,-15607
chr2:43877565-43877875	chr2	+	43877564	43877657	True	NM_001101330,NM_172069	chr2,chr2	-,+	LOC728819,PLEKHH2	25861,-13182
chr11:118304142-118304366	chr11	+	118304141	118304277	True	NM_001197104,NM_005933,NM_001040651	chr11,chr11,chr11	+,+,-	MLL,MLL,CD3D	2927,2927,-90682
chr18:29304566-29304816	chr18	+	29304600	29304862	True	NM_001034172,NM_000371	chr18,chr18	-,+	MCART2,TTR	36031,-132921
chr1:228334587-228334826	chr1	+	228334621	228334875	True	NM_000858,NM_020435,NM_181465,NM_001159390,NM_001159391	chr1,chr1,chr1,chr1,chr1	+,+,-,+,+	GUK1,GJC2,MRPL55,GUK1,GUK1	-6743,2677,-37608,-6743,-2268
chr6:88855467-88855983	chr6	+	88855497	88855812	True	NM_033181,NM_030960,NM_001160260	chr6,chr6,chr6	-,+,-	CNR1,SPACA1,CNR1	-441,-98049,5127
chr15:23085450-23085685	chr15	+	23085563	23085655	True	NM_001142275,NM_144599,NM_001033028	chr15,chr15,chr15	-,-,+	NIPA1,NIPA1,CYFIP1	1238,831,-129859
chr13:50157032-50158700	chr13	+	50157433	50158619	True	NM_138450,NM_018191	chr13,chr13	+,-	ARL11,RCBTB1	43815,1150
chrX:64714583-64715249	chrX	+	64714756	64715245	True	NM_001010888,NM_001170649	chrX,chrX	+,-	ZC3H12B,LAS1L	-6192,39498
chr11:118177461-118178478	chr11	+	118177477	118178353	True	NM_000733,NM_000732	chr11,chr11	+,-	CD3E,CD3D	-2233,35157
chr2:233873800-233874186	chr2	+	233873826	233874226	True	NM_005383,NM_019850	chr2,chr2	+,-	NEU2,NGEF	23155,3775
chr16:3164523-3165156	chr16	+	3164750	3165110	True	NM_001042428,NR_024167,NR_024166,NM_003456	chr16,chr16,chr16,chr16	+,-,-,+	ZNF205,MGC3771,MGC3771,ZNF205	-2238,539,539,-2238
chr1:22265475-22265856	chr1	+	22265723	22265893	True	NM_005529,NM_007352	chr1,chr1	-,+	HSPG2,CELA3B	-1973,37524
chr22:19278475-19278899	chr22	+	19278558	19278850	True	NM_001835,NM_007098,NM_003776	chr22,chr22,chr22	-,-,+	CLTCL1,CLTCL1,MRPL40	439,439,141185
chr4:170930388-170931896	chr4	+	170930636	170931726	True	NM_001009554,NM_173872	chr4,chr4	-,+	MFAP3L,CLCN3	-5701,-388972
chr1:150227485-150228543	chr1	+	150227485	150228587	True	NM_012113,NM_001077628	chr1,chr1	+,-	CA14,APH1A	1630,12995
chr18:44098612-44099320	chr18	+	44098654	44099358	True	NM_001173129,NM_152470,NM_001145473	chr18,chr18,chr18	-,+,-	LOXHD1,RNF165,LOXHD1	9,-184518,9
chr20:23859141-23860251	chr20	+	23859161	23860181	True	NM_001900,NR_001279	chr20,chr20	-,+	CST5,CSTT	249,-359429
chr15:23129536-23131302	chr15	+	23129920	23130646	True	NM_001142275,NR_024074	chr15,chr15	-,+	NIPA1,GOLGA8IP	-43077,124595
chr15:23129536-23131302	chr15	-	29061896	29062106	False	NR_033351,NR_037599	chr15,chr15	-,+	GOLGA8F,LOC646278	-283753,-26975
chr7:156800661-156800913	chr7	+	156800683	156800885	True	NM_005515,NM_138400,NM_001165255	chr7,chr7,chr7	-,+,-	MNX1,NOM1,MNX1	2512,-58317,1294
chr2:139275030-139276536	chr2	+	139275925	139276570	True	NM_001001664,NM_007226	chr2,chr2	+,-	SPOPL,NXPH2	-16635,261292
chr11:126041994-126042680	chr11	+	126042121	126042715	True	NM_001144827,NM_024556	chr11,chr11	-,+	RPUSD4,FAM118B	38922,38903
chr16:20413779-20414228	chr16	+	20413929	20414247	True	NM_174924,NM_017888	chr16,chr16	-,+	PDILT,ACSM5	1836,6608
chr12:110573393-110574872	chr12	+	110573756	110574828	True	NM_207435,NM_014055	chr12,chr12	-,+	C12orf76,IFT81	-68256,-11668
chr7:17042654-17043118	chr7	+	17042834	17043101	True	NM_176813,NM_014399	chr7,chr7	-,+	AGR3,TSPAN13	-121221,-249543
chr6:15026600-15027145	chr6	+	15026920	15027189	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	219337,636151
chr1:173549184-173549581	chr1	+	173549257	173549488	True	NM_001195190,NM_178527	chr1,chr1	+,-	LOC730159,SLC9A11	55172,22810
chr12:107016907-107017675	chr12	+	107017133	107017448	True	NM_001033050,NM_002920	chr12,chr12	-,+	MTERFD3,RFX4	363531,-22234
chr12:12511605-12511863	chr12	+	12511715	12511899	True	NM_058169,NM_018050,NR_024061	chr12,chr12,chr12	+,-,-	LOH12CR1,MANSC1,LOH12CR2	-1754,-8546,-1714
chr11:118928960-118929267	chr11	+	118929027	118929287	True	NM_021729,NM_006389,NM_001130991	chr11,chr11,chr11	+,-,-	VPS11,HYOU1,HYOU1	9205,-1111,-1102
chr16:81040483-81040777	chr16	+	81040603	81040691	True	NM_020188,NM_001100624,NM_018455,NM_001100625	chr16,chr16,chr16,chr16	-,+,+,+	C16orf61,CENPN,CENPN,CENPN	-101,-551,-551,-551
chr17:73449859-73451450	chr17	+	73450009	73451285	True	NM_014738,NM_203506	chr17,chr17	+,-	KIAA0195,GRB2	1378,-48219
chr12:11063022-11063792	chr12	+	11063117	11063787	True	NM_005042,NM_023920	chr12,chr12	+,-	PRH2,TAS2R13	18046,-956
chr12:108157161-108158236	chr12	+	108157244	108158166	True	NM_012406,NM_203436	chr12,chr12	-,+	PRDM4,ASCL4	-2330,9995
chr19:4302790-4303341	chr19	+	4302922	4303084	True	NM_001169126,NM_024333,NM_144615	chr19,chr19,chr19	-,+,-	TMIGD2,FSD1,TMIGD2	-494,1506,-494
chr22:24111942-24112395	chr22	+	24111950	24112116	True	NM_213720,NM_005940,NM_182520	chr22,chr22,chr22	-,+,+	CHCHD10,MMP11,C22orf15	-1809,2919,-6793
chrX:15759489-15759892	chrX	+	15759521	15759943	True	NR_002725,NM_007220	chrX,chrX	-,+	INE2,CA5B	45821,-3165
chr11:117747314-117747709	chr11	+	117747570	117747758	True	NM_001164837,NM_001204268,NM_022003,NM_001164832,NM_001164831,NM_001164836,NR_037907,NM_001558	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,-,-,-,+	FXYD6,FXYD6-FXYD2,FXYD6,FXYD6,FXYD6,FXYD6,FXYD6-FXYD2,IL10RA	38,38,38,38,493,38,38,109347
chr16:67184965-67185180	chr16	+	67184980	67185228	True	NM_003789,NM_033309,NM_018378	chr16,chr16,chr16	-,-,+	TRADD,B3GNT9,FBXL8	8634,-78,8662
chr10:115454057-115455288	chr10	+	115454152	115455066	True	NM_033339,NM_198060	chr10,chr10	+,-	CASP7,NRAP	-14777,-30347
chrX:40119917-40120250	chrX	+	40120199	40120295	True	NM_001123384,NM_005765	chrX,chrX	-,+	BCOR,ATP6AP2	-83617,319920
chr17:7607750-7608134	chr17	+	7608046	7608162	True	NM_001126114,NM_001406	chr17,chr17	-,+	TP53,EFNB3	-17183,357
chr1:158638400-158639341	chr1	+	158638501	158639332	True	NM_001004478,NM_003126	chr1,chr1	+,-	OR10Z1,SPTA1	-62337,17224
chr1:248436960-248437202	chr1	+	248437166	248437246	True	NM_017504,NM_001004695	chr1,chr1	+,-	OR2M4,OR2T33	-34993,-50
chr1:26646533-26648130	chr1	+	26646652	26648100	True	NM_145345,NM_001803	chr1,chr1	-,+	UBXN11,CD52	-1896,-2292
chr11:30597401-30597715	chr11	+	30597400	30597734	True	NM_001584,NM_152316	chr11,chr11	-,+	MPPED2,C11orf46	4366,-252802
chr16:16044410-16044706	chr16	+	16044488	16044744	True	NM_019900,NM_144600,NM_004996,NM_019862,NM_019898,NM_019899	chr16,chr16,chr16,chr16,chr16,chr16	+,-,+,+,+,+	ABCC1,FOPNL,ABCC1,ABCC1,ABCC1,ABCC1	-1105,-62041,-1105,-1105,-1105,-1105
chr12:6756014-6756329	chr12	+	6756052	6756216	True	NM_001164094,NM_032489	chr12,chr12	+,-	COPS7A,ACRBP	76933,414
chr2:219694342-219694794	chr2	+	219694347	219694817	True	NM_017431,NM_006522	chr2,chr2	-,+	PRKAG3,WNT6	1745,29728
chr18:907003-907266	chr18	+	907006	907152	True	NM_001117,NM_001099733,NM_005433	chr18,chr18,chr18	+,+,-	ADCYAP1,ADCYAP1,YES1	-1760,-2113,-94679
chr2:180699874-180701336	chr2	+	180699994	180701128	True	NR_031659,NM_182678	chr2,chr2	-,+	MIR1258,UBE2E3	24565,1143983
chr6:149887033-149887371	chr6	+	149887217	149887287	True	NM_139126,NM_138785	chr6,chr6	-,+	PPIL4,C6orf72	-20046,240
chr4:156129572-156129774	chr4	+	156129740	156129816	True	NM_000910,NM_001039580	chr4,chr4	+,-	NPY2R,MAP9	-10,168356
chr5:140603268-140604561	chr5	+	140603526	140604417	True	NM_018934,NM_031947,NR_001281	chr5,chr5,chr5	+,-,+	PCDHB14,SLC25A2,PCDHB18	-500,79245,9520
chr11:18253924-18255719	chr11	+	18254022	18255458	True	NM_006512,NR_026563	chr11,chr11	-,+	SAA4,LOC494141	2984,-23242
chr11:16465482-16466876	chr11	+	16465919	16466803	True	NM_014267,NM_033326	chr11,chr11	+,-	C11orf58,SOX6	293344,31190
chrX:99985160-99986623	chrX	+	99985176	99986470	True	NM_080737,NM_014467,NM_001129896,NM_001174068	chrX,chrX,chrX,chrX	-,+,-,-	SYTL4,SRPX2,SYTL4,SYTL4	102,-86065,715,102
chr3:50314369-50314699	chr3	+	50314519	50314671	True	NM_006764,NM_153215,NM_004636,NM_001005914	chr3,chr3,chr3,chr3	-,+,+,+	IFRD2,C3orf45,SEMA3B,SEMA3B	15405,1846,-9530,-9530
chr10:43935961-43936804	chr10	+	43936123	43936245	True	NR_026693,NM_001098204	chr10,chr10	+,-	ZNF487P,HNRNPF	-3601,-31427
chr1:235491577-235491810	chr1	+	235491584	235491798	True	NM_031371,NM_001037277,NM_016374,NR_036605,NM_004837	chr1,chr1,chr1,chr1,chr1	-,+,-,+,+	ARID4B,GGPS1,ARID4B,GGPS1,GGPS1	-52,-46,-52,70,70
chr7:138350950-138352433	chr7	+	138350960	138352456	True	NM_174959,NM_001085429	chr7,chr7	-,+	SVOPL,TMEM213	-1991,130282
chr17:16395828-16396217	chr17	+	16395930	16396234	True	NR_003054,NM_207387,NM_001113567	chr17,chr17,chr17	+,-,-	SNORD65,C17orf76,C17orf76	-51441,-450,-450
chr1:54874222-54874602	chr1	+	54874256	54874591	True	NM_018070,NM_145716,NM_147161,NM_001009955	chr1,chr1,chr1,chr1	-,-,+,-	SSBP3,SSBP3,ACOT11,SSBP3	-2277,-2277,139215,-2164
chr6:29940199-29942067	chr6_qbl_hap6	+	1234528	1234584	False	NR_001317,NR_028032	chr6_qbl_hap6,chr6_qbl_hap6	-,+	HCG4P6,HCG9	-46453,1099
chr6:29940199-29942067	chr6	+	29941732	29941798	True	NR_001317,NR_028032	chr6,chr6	-,+	HCG4P6,HCG9	-48304,1093
chr1:55227329-55228106	chr1	+	55227478	55228149	True	NM_001110533,NM_152268	chr1,chr1	+,-	C1orf177,PARS2	43586,2127
chr6:15056723-15058178	chr6	+	15057117	15057620	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	188906,605726
chr7:23159719-23161126	chr7	+	23159935	23160895	True	NM_018846,NM_032581	chr7,chr7	+,-	KLHL7,FAM126A	-14084,-106165
chr16:1924240-1925542	chr16	+	1924688	1925358	True	NM_152764,NM_001163560,NR_033914,NM_001142398	chr16,chr16,chr16,chr16	-,-,-,+	C16orf73,C16orf73,NCRNA00254,FAHD1	-2586,-2509,8926,-47514
chr9:114506087-114507936	chr9	+	114506614	114507693	True	NM_001080551,NM_001198664	chr9,chr9	-,+	C9orf84,GNG10	14171,-82830
chr9:100614839-100615082	chr9	+	100614868	100615016	True	NM_004473,NM_016481	chr9,chr9	+,-	FOXE1,C9orf156	520,69886
chr19:45930140-45930587	chr19	+	45930437	45930575	True	NM_001166049,NM_202001,NM_012099,NM_001983	chr19,chr19,chr19,chr19	-,-,+,-	ERCC1,ERCC1,CD3EAP,ERCC1	-3260,-3617,-21026,-3260
chr9:131549677-131550264	chr9	+	131549762	131550254	True	NM_018201,NM_006336	chr9,chr9	+,-	TBC1D13,ZER1	-303,-15564
chr2:73614167-73614954	chr2	+	73614241	73614973	True	NM_001965,NM_015120	chr2,chr2	-,+	EGR4,ALMS1	-93412,-1409
chr4:79702284-79702966	chr4	+	79702473	79703009	True	NM_198892,NM_017593,NM_001040202	chr4,chr4,chr4	+,+,-	BMP2K,BMP2K,PAQR3	-4998,-4998,157623
chr10:21824321-21825029	chr10	+	21824325	21824852	True	NM_004641,NM_001195628,NM_001195630,NM_207371,NM_001195626,NM_001195627	chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,-,+,+	MLLT10,MLLT10,MLLT10,C10orf140,MLLT10,MLLT10	-1275,-1275,-1275,-9714,-802,-1275
chr7:66346823-66347544	chr7	+	66346849	66347314	True	NR_003934,NM_017994	chr7,chr7	-,+	LOC729156,C7orf42	-37036,38888
chr5:173315774-173315994	chr5	+	173315844	173316015	True	NM_030627,NM_138369	chr5,chr5	+,-	CPEB4,BOD1	-564,-272178
chr3:122920638-122920840	chr3	+	122920653	122920777	True	NM_012430,NM_001031702	chr3,chr3	+,-	SEC22A,SEMA5B	4,-174077
chr18:3215492-3215985	chr18	+	3215628	3215988	True	NM_019856,NM_006471,NM_003803	chr18,chr18,chr18	-,+,-	MYOM1,MYL12A,MYOM1	4168,31539,4168
chrX:150068169-150068733	chrX	+	150068337	150068781	True	NM_031462,NM_001184808,NM_134446,NM_134445,NM_005342	chrX,chrX,chrX,chrX,chrX	-,-,-,-,+	CD99L2,CD99L2,CD99L2,CD99L2,HMGB3	-1048,-1048,-1048,-1048,82981
chr10:135158472-135158968	chr10	+	135158702	135158982	True	NM_001145201,NM_015722,NM_145202	chr10,chr10,chr10	+,-,+	PRAP1,CALY,PRAP1	1861,-8227,1861
chr6:33380054-33380538	chr6	+	33380165	33380393	True	NM_002636,NM_001014838,NM_006772,NM_001014433,NM_001014837,NM_001014840,NM_024165,NR_027692,NM_015921	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	+,-,+,-,-,-,+,+,-	PHF1,CUTA,SYNGAP1,CUTA,CUTA,CUTA,PHF1,PHF1,CUTA	-1443,5722,7453,5722,5722,5722,-1443,-1443,5722
chr6:33380054-33380538	chr6_ssto_hap7	+	4860413	4860641	False	NM_002636,NM_001014838,NM_006772,NM_001014433,NM_001014837,NM_001014840,NM_024165,NR_027692	chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7	+,-,+,-,-,-,+,+	PHF1,CUTA,SYNGAP1,CUTA,CUTA,CUTA,PHF1,PHF1	-1443,5720,7451,5720,5720,5720,-1443,-1443
chr19:4153219-4153656	chr19	+	4153382	4153654	True	NM_032607,NM_001193285	chr19,chr19	+,-	CREB3L3,SIRT6	-26,28992
chr15:102252397-102252833	chr15	+	102252475	102252875	True	NM_152334,NM_001005326	chr15,chr15	-,+	TARSL2,OR4F6	11820,93047
chr8:38388629-38389400	chr8	+	38388750	38389040	True	NM_207412,NM_001199660	chr8,chr8	-,+	C8orf86,LETM2	-2570,-144152
chr2:231904075-231904871	chr2	+	231904151	231904813	True	NR_033879,NM_001144994	chr2,chr2	-,+	LOC348761,C2orf72	-43404,-1929
chr17:57287900-57288347	chr17	+	57287946	57288387	True	NM_182569,NM_182620,NM_001165994,NM_001165993,NM_018149	chr17,chr17,chr17,chr17,chr17	+,-,+,+,+	GDPD1,SKA2,GDPD1,GDPD1,C17orf71	9440,-55146,9440,9440,-626
chr7:65446042-65446309	chr7	+	65446042	65446102	True	NM_000181,NM_000048	chr7,chr7	-,+	GUSB,ASL	1249,94673
chr2:110956254-110956478	chr2	+	110956276	110956500	True	NM_207181,NM_001128178,NM_001128179,NR_037626,NM_000272	chr2,chr2,chr2,chr2,chr2	-,-,-,+,-	NPHP1,NPHP1,NPHP1,LOC100507334,NPHP1	6191,6191,6191,46714,6191
chr11:45876958-45877273	chr11	+	45876967	45877318	True	NM_021117,NM_001080446,NM_001127457	chr11,chr11,chr11	+,-,+	CRY2,C11orf94,CRY2	-8061,51566,-8349
chr19:58920518-58921414	chr19	+	58920753	58921371	True	NM_138466,NM_173548	chr19,chr19	-,+	ZNF837,ZNF584	-28364,-741
chr18:77746198-77746707	chr18	+	77746455	77746671	True	NM_001136180,NM_006701	chr18,chr18	+,-	HSBP1L1,TXNL4A	-21924,1911
chr8:33342253-33342648	chr8	+	33342352	33342678	True	NM_032664,NM_032509	chr8,chr8	-,+	FUT10,MAK16	-11688,6
chr4:76861234-76861482	chr4	+	76861256	76861484	True	NM_014435,NM_001042402,NM_001130017	chr4,chr4,chr4	-,-,+	NAAA,NAAA,ART3	732,732,70852
chr1:202127347-202127963	chr1	+	202127425	202127894	True	NR_002930,NR_037663,NR_037664,NM_001199797,NM_080588,NM_002832	chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,-,-,-	PTPRVP,PTPN7,PTPN7,PTPN7,PTPN7,PTPN7	9284,2873,2873,2873,1276,2873
chr19:38878005-38878444	chr19	+	38878017	38878433	True	NM_001042522,NM_152657,NM_001039616	chr19,chr19,chr19	+,-,+	SPRED3,GGN,SPRED3	2505,285,2505
chrX:20164507-20164840	chrX	+	20164571	20164695	True	NM_001173456,NM_001412	chrX,chrX	+,-	PDHA1,EIF1AX	-802618,-4605
chr7:99525623-99525901	chr7	+	99525623	99525949	True	NR_036679,NM_181538,NM_033017,NM_033091	chr7,chr7,chr7,chr7	+,-,-,-	AZGP1P1,GJC3,TRIM4,TRIM4	52435,1344,-8400,-8400
chr7:32981975-32982230	chr7	+	32981993	32982169	True	NM_007270,NR_003500	chr7,chr7	+,-	FKBP9,RP9P	14835,663
chr2:26205229-26205486	chr2	+	26205280	26205446	True	NM_002254,NM_016131	chr2,chr2	-,+	KIF3C,RAB10	47,51282
chr14:58621808-58623031	chr14	+	58621845	58622662	True	NM_018477,NM_001001872	chr14,chr14	+,-	ACTR10,C14orf37	44170,-2998
chr1:156863693-156863912	chr1	+	156863751	156863905	True	NM_014215,NM_001080471	chr1,chr1	-,+	INSRR,PEAR1	-35039,-279
chr12:116971917-116972367	chr12	+	116971958	116972414	True	NR_027346,NR_027345,NM_024738	chr12,chr12,chr12	+,+,-	NCRNA00173,NCRNA00173,C12orf49	-769,-782,203479
chr19:45145221-45146407	chr19	+	45145227	45146305	True	NM_006505,NM_001135770,NM_001135769,NM_001135768,NR_027754	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	PVR,PVR,PVR,PVR,CEACAM22P	792,792,792,792,-85077
chr3:94656457-94656889	chr3	+	94656526	94656842	True	NR_015400,NM_001195643	chr3,chr3	+,-	LOC255025,DHFRL1	264,-874459
chr10:1035348-1036382	chr10	+	1035373	1036291	True	NM_033261,NM_012341	chr10,chr10	-,+	IDI2,GTPBP4	35566,-1084
chr9:27529029-27529284	chr9	+	27529120	27529288	True	NM_024761,NM_020124	chr9,chr9	-,+	MOBKL2B,IFNK	618,-4859
chr10:80827280-80827845	chr10	+	80827311	80827836	True	NM_020338,NR_015429,NR_024431,NR_024429	chr10,chr10,chr10,chr10	+,-,-,-	ZMIZ1,LOC283050,LOC283050,LOC283050	955,-106,-106,-106
chr12:50354048-50354877	chr12	+	50354079	50354795	True	NM_000486,NM_001651,NR_026948	chr12,chr12,chr12	+,+,-	AQP2,AQP5,LOC283332	-9606,483,-48433
chr22:37821999-37822709	chr22	+	37822066	37822480	True	NM_152243,NM_052906	chr22,chr22	+,-	CDC42EP1,ELFN2	133990,1075
chr16:129992-130548	chr16	+	130110	130532	True	NM_001015052,NM_022450,NM_002434,NM_001015054	chr16,chr16,chr16,chr16	+,-,+,+	MPG,RHBDF1,MPG,MPG	-1992,-7481,-1992,-3143
chr12:114840721-114840965	chr12	+	114840727	114840905	True	NM_181486,NM_080718,NM_080717,NM_138432,NM_000192	chr12,chr12,chr12,chr12,chr12	-,-,-,+,-	TBX5,TBX5,TBX5,SDSL,TBX5	3034,848,5392,-980562,5392
chr16:58287927-58288599	chr16	+	58287980	58288422	True	NM_014157,NM_001142302,NM_001080492	chr16,chr16,chr16	+,+,-	CCDC113,CCDC113,PRSS54	-4191,-4191,40579
chr1:160175978-160177231	chr1	+	160176026	160177034	True	NM_003768,NR_028106	chr1,chr1	+,-	PEA15,DCAF8	-952,55293
chr15:29851809-29852230	chr15	+	29851864	29852186	True	NM_015307,NR_026859	chr15,chr15	-,+	FAM189A1,FAM7A3	10791,543748
chr10:75758316-75758826	chr10	+	75758359	75758839	True	NM_003373,NM_001001791,NM_014000	chr10,chr10,chr10	+,-,+	VCL,C10orf55,VCL	-538,-75824,-538
chr14:91579611-91580278	chr14	+	91579666	91580156	True	NM_001102369,NM_001102368,NM_001102367,NM_001102366,NM_024952,NM_182398	chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,+,+,-	C14orf159,C14orf159,C14orf159,C14orf159,C14orf159,RPS6KA5	200,200,822,200,200,-52673
chr1:44494683-44495137	chr1	+	44494755	44494977	True	NM_001024845,NM_152499	chr1,chr1	-,+	SLC6A9,CCDC24	2207,-37526
chr8:82649639-82651422	chr8	+	82649888	82651309	True	NR_033196,NM_152284	chr8,chr8	-,+	ZFAND1,CHMP4C	-16349,-5259
chr1:19579492-19580290	chr1	+	19579553	19580169	True	NM_016183,NM_015047	chr1,chr1	+,-	MRTO4,KIAA0090	-1535,-1507
chr1:1168907-1169331	chr1	+	1168941	1169248	True	NM_080605,NM_016547,NM_016176	chr1,chr1,chr1	+,-,-	B3GALT6,SDF4,SDF4	-1363,-1494,-1494
chr6:42990855-42991798	chr6	+	42990984	42991544	True	NM_057161,NM_033112,NM_014623	chr6,chr6,chr6	+,+,-	KLHDC3,RRP36,MEA1	-9058,-1650,-9366
chr12:57481206-57481437	chr12	+	57481355	57481423	True	NM_001130963,NM_005967,NM_015257	chr12,chr12,chr12	-,+,-	TMEM194A,NAB2,TMEM194A	-8781,1253,-8781
chr12:88176146-88177106	chr12	+	88176480	88177125	True	NM_001009894,NR_033410	chr12,chr12	+,-	C12orf29,MKRN9P	252142,1413
chr1:24284910-24285574	chr1	+	24285262	24285566	True	NM_001191006,NM_017761	chr1,chr1	-,+	SRSF10,PNRC2	21437,734
chr8:9947210-9949207	chr8	+	9947322	9948453	True	NM_001135671,NM_001199729,NR_029668	chr8,chr8,chr8	+,+,-	MSRA,MSRA,MIR124-1	4612,4612,-186340
chr3:100584447-100586201	chr3	+	100584546	100585907	True	NM_015429,NM_001195478	chr3,chr3	-,+	ABI3BP,TFG	126484,-156211
chr10:98602074-98602518	chr10	+	98602180	98602356	True	NM_032440,NM_152309	chr10,chr10	+,-	LCOR,PIK3AP1	-9526,-121901
chr1:155580457-155581111	chr1	+	155580618	155581079	True	NM_018116,NM_018489	chr1,chr1	+,-	MSTO1,ASH1L	-663,-48294
chr1:155580457-155581111	chr1	+	155716198	155716659	False	NM_139118,NR_024117	chr1,chr1	-,+	YY1AP1,MSTO2P	-57375,-641
chr1:154537100-154538542	chr1	+	154537631	154538543	True	NM_000748,NM_017582	chr1,chr1	+,-	CHRNB2,UBE2Q1	1713,-6511
chr20:43373733-43374297	chr20	+	43373747	43374290	True	NM_182970,NM_022358	chr20,chr20	-,+	RIMS4,KCNK15	64672,197
chr5:111496439-111496656	chr5	+	111496443	111496613	True	NR_002922,NM_001142475,NR_015370	chr5,chr5,chr5	+,-,+	SNORA13,C5orf13,NCRNA00219	568,-183815,-271
chr18:70536556-70536899	chr18	+	70536654	70536928	True	NM_014177,NM_138999,NM_001201465,NM_138966	chr18,chr18,chr18,chr18	+,-,-,-	C18orf55,NETO1,NETO1,NETO1	1278817,-3720,-1844,-1844
chr19:56047653-56048212	chr19	+	56047762	56048092	True	NM_001144950,NM_001199824,NM_001101401	chr19,chr19,chr19	+,-,-	SSC5D,LOC100130827,SBK2	-47943,8867,393
chr16:67313598-67314104	chr16	+	67313743	67314103	True	NM_013241,NM_015432,NM_001129728,NM_001129729,NM_001129727,NM_001129731	chr16,chr16,chr16,chr16,chr16,chr16	-,+,+,+,+,+	FHOD1,PLEKHG4,PLEKHG4,PLEKHG4,PLEKHG4,PLEKHG4	-32318,-2381,-744,-305,-1718,-302
chr10:70090461-70091191	chr10	+	70090933	70091191	True	NM_001033083,NM_021644,NM_012207,NM_022129	chr10,chr10,chr10,chr10	-,+,+,-	PBLD,HNRNPH3,HNRNPH3,PBLD	1543,576,576,1543
chr11:44072902-44073671	chr11	+	44072906	44073720	True	NM_001031854,NM_021926	chr11,chr11	+,-	ACCSL,ALX4	-3426,258046
chr14:103779309-103781162	chr14	+	103780126	103781158	True	NR_033938,NM_001969	chr14,chr14	-,+	LOC100131366,EIF5	-124761,19334
chr3:77125053-77126642	chr3	+	77125117	77126680	True	NM_001128929,NM_001128223	chr3,chr3	+,-	ROBO2,ZNF717	20482,-1290862
chr3:31495899-31497209	chr3	+	31495926	31497190	True	NM_178862,NM_001174060	chr3,chr3	+,-	STT3B,OSBPL10	77300,526202
chr22:42826694-42826921	chr22	+	42826707	42826926	True	NR_027786,NM_145912	chr22,chr22	+,-	SERHL,NFAM1	69658,1525
chr7:88076545-88077694	chr7	+	88076660	88077535	True	NM_024636,NM_181646	chr7,chr7	-,+	STEAP4,ZNF804B	-140451,311217
chr22:41636451-41637128	chr22	+	41636473	41637035	True	NM_138481,NM_031488	chr22,chr22	-,+	CHADL,L3MBTL2	-50,-35211
chr19:57901106-57901514	chr19	+	57901137	57901359	True	NM_001172773,NM_020633,NM_152909	chr19,chr19,chr19	+,-,+	ZNF548,VN1R1,ZNF548	30,66798,30
chr1:6617041-6617335	chr1	+	6617163	6617373	True	NM_177540,NM_024654,NM_138697	chr1,chr1,chr1	+,-,+	TAS1R1,NOL9,TAS1R1	-1876,-2505,-1876
chr12:1100760-1101270	chr12	+	1100938	1101303	True	NM_134424,NR_027946,NM_178039,NR_027948,NR_027949,NM_178040	chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,+,+,+	RAD52,ERC1,ERC1,ERC1,ERC1,ERC1	-42075,-592,-592,-592,-592,-592
chr9:136288311-136288737	chr9	+	136288402	136288686	True	NR_024514,NM_020385,NM_139026,NM_139027,NM_139025	chr9,chr9,chr9,chr9,chr9	+,-,+,+,+	ADAMTS13,REXO4,ADAMTS13,ADAMTS13,ADAMTS13	-9001,-5238,-1340,-1340,-1340
chr20:31826625-31828241	chr20	+	31826830	31828285	True	NM_016583,NM_016082,NM_130852	chr20,chr20,chr20	+,-,+	PLUNC,CDK5RAP1,PLUNC	-3079,161103,-3079
chr12:57156804-57157195	chr12	+	57156974	57157228	True	NM_000946,NM_003725	chr12,chr12	-,+	PRIM1,HSD17B6	-10828,17
chrX:102981288-102982873	chrX	+	102981311	102982771	True	NM_001024452,NM_001172285,NM_182541	chrX,chrX,chrX	-,-,+	GLRA4,GLRA4,TMEM31	831,831,-15526
chr9:127616103-127616342	chr9	+	127616171	127616241	True	NM_007209,NM_001045476	chr9,chr9	-,+	RPL35,WDR38	8049,-468
chr10:75406742-75407412	chr10	+	75406815	75407128	True	NM_021245,NM_024875,NM_001114133,NM_004922	chr10,chr10,chr10,chr10	-,-,-,+	MYOZ1,SYNPO2L,SYNPO2L,SEC24C	-5300,3709,8754,97002
chrX:54982665-54983073	chrX	+	54982666	54983099	True	NM_002625,NM_177556	chrX,chrX	-,+	PFKFB1,TRO	37471,-35468
chr3:148943929-148945440	chr3	+	148943985	148945501	True	NM_000096,NM_032383	chr3,chr3	-,+	CP,HPS3	-4153,-96667
chr5:172092355-172092837	chr5	+	172092371	172092559	True	NM_001142651,NM_004417	chr5,chr5	+,-	NEURL1B,DUSP1	-24146,105694
chr3:52017973-52019153	chr3	+	52018102	52019019	True	NM_001198898,NM_001198896,NM_000666,NM_001198895,NM_001146314,NR_027476,NM_015407,NM_001198897,NR_037192,NM_032750	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,-,-,+,+,+,-	ACY1,ACY1,ACY1,ACY1,ABHD14B,ABHD14B,ABHD14A,ACY1,ABHD14A-ACY1,ABHD14B	-853,-853,-853,-853,-9456,-9456,-9111,-853,-9111,-9456
chr19:3726130-3726939	chr19	+	3726237	3726327	True	NM_014428,NM_012398	chr19,chr19	+,-	TJP3,PIP5K1C	2046,-25760
chr1:26185356-26185867	chr1	+	26185376	26185891	True	NM_024037,NM_001099626	chr1,chr1	-,+	C1orf135,FAM54B	7,-38108
chr3:195870488-195870706	chr3	+	195870610	195870730	True	NR_034088,NM_001128148	chr3,chr3	+,-	LOC401109,TFRC	-1154,-61578
chr15:53095602-53095968	chr15	+	53095607	53096003	True	NM_004498,NM_002748	chr15,chr15	-,+	ONECUT1,MAPK6	-13398,-784247
chr1:54302259-54303047	chr1	+	54302686	54302862	True	NM_000792,NR_033142,NM_001168551,NM_018087	chr1,chr1,chr1,chr1	+,-,-,-	DIO1,TMEM48,TMEM48,TMEM48	56998,1413,1413,1413
chr12:8229672-8231167	chr12	+	8229771	8231135	True	NM_004054,NM_015509,NR_024260	chr12,chr12,chr12	-,+,+	C3AR1,NECAP1,NECAP1	-10816,3671,3671
chr16:58714651-58715780	chr16	+	58714669	58715643	True	NM_018231,NM_024860	chr16,chr16	-,+	SLC38A7,SETD6	3087,-165337
chr16:773687-773889	chr16	+	773707	773873	True	NM_001031737,NM_023933,NM_032304,NM_024042	chr16,chr16,chr16,chr16	-,+,+,+	CCDC78,FAM173A,HAGHL,METRN	2650,-2600,3392,-8585
chr22:39758146-39758409	chr22	+	39758186	39758416	True	NM_001033853,NM_145738	chr22,chr22	-,+	RPL3,SYNGR1	-42516,1758
chr13:27333223-27333683	chr13	+	27333271	27333705	True	NM_005288,NM_006646	chr13,chr13	-,+	GPR12,WASF3	1267,-201482
chr20:1163897-1164300	chr20	+	1164077	1164281	True	NM_018354,NM_001009612	chr20,chr20	-,+	C20orf46,C20orf202	886,19816
chr11:120195198-120195897	chr11	+	120195243	120195735	True	NM_001198674,NM_001198675,NM_001198672,NM_001198673,NM_001198670,NM_001198671,NM_012101,NM_174926	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,+,-,+	TMEM136,TMEM136,TMEM136,TMEM136,TMEM136,TMEM136,TRIM29,TMEM136	102,102,102,102,102,102,-186380,102
chr16:5114758-5115911	chr16	+	5114938	5115824	True	NM_001098514,NM_152459,NM_019109	chr16,chr16,chr16	-,-,+	C16orf89,C16orf89,ALG1	337,337,5985
chr11:65384769-65385612	chr11	+	65384885	65385369	True	NM_032223,NM_002419	chr11,chr11	+,-	PCNXL3,MAP3K11	-1153,-3165
chrX:75648727-75649103	chrX	+	75648731	75649115	True	NM_020932,NR_029909	chrX,chrX	+,-	MAGEE1,MIR384	-736,490720
chr1:19613851-19614114	chr1	+	19613857	19614004	True	NM_012067,NR_037847,NM_001040125	chr1,chr1,chr1	-,-,+	AKR7A3,LOC100506730,PQLC2	1329,8279,24735
chr6:35521179-35521699	chr6	+	35521183	35521435	True	NM_003322,NM_007104	chr6,chr6	-,+	TULP1,RPL10A	-40536,-85056
chr3:10293686-10294631	chr3	+	10293975	10294357	True	NM_001134941,NM_014760	chr3,chr3	-,+	GHRL,TATDN2	38112,-3857
chr17:57703855-57704418	chr17	+	57703901	57704208	True	NM_004859,NM_016077	chr17,chr17	+,-	CLTC,PTRH2	-6910,80705
chr7:44198378-44199010	chr7	+	44198381	44198917	True	NM_006555,NM_033507,NM_033508	chr7,chr7,chr7	+,-,-	YKT6,GCK,GCK	41660,20,20
chr5:96518724-96519427	chr5	+	96518821	96519419	True	NM_001159749,NM_018343,NM_175920	chr5,chr5,chr5	-,-,+	RIOK2,RIOK2,LNPEP	4,4,-224716
chr2:121014587-121015611	chr2	+	121014611	121015597	True	NM_002881,NR_000034	chr2,chr2	+,-	RALB,TMEM185B	-4258,-33627
chr12:113574647-113574874	chr12	+	113574722	113574892	True	NM_001144872,NM_001193521,NM_004658,NM_001193520	chr12,chr12,chr12,chr12	+,-,-,-	CCDC42B,RASAL1,RASAL1,RASAL1	12770,-1163,-678,-678
chr17:61951752-61952380	chr17	+	61951778	61952368	True	NM_020991,NM_022645,NM_022644,NM_022557,NM_022556,NR_002947,NM_002059,NM_022558	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,+,-,-	CSH2,CSH2,CSH2,GH2,GH2,TCAM1P,GH2,GH2	-689,-689,-689,6905,6905,-17453,6905,6905
chr17:61951752-61952380	chr17	+	61974827	61974877	False	NM_022641,NM_022640,NR_002947,NM_001317	chr17,chr17,chr17,chr17	-,-,+,-	CSH1,CSH1,TCAM1P,CSH1	-806,-806,-40502,-806
chr22:28315948-28317912	chr22	+	28316219	28317544	True	NR_036169,NR_026963,NR_026962,NM_012399,NR_036170	chr22,chr22,chr22,chr22,chr22	-,+,+,-,+	MIR3199-1,TTC28-AS1,TTC28-AS1,PITPNB,MIR3199-2	-53,-906,-906,-964,32
chr17:33570785-33571664	chr17	+	33570885	33571632	True	NM_152462,NM_144975	chr17,chr17	-,+	AMAC1,SLFN5	-49473,-851
chr4:165899394-165899947	chr4	+	165899463	165899530	True	NM_153027,NM_001012414	chr4,chr4	+,-	C4orf39,TRIM61	-21414,-645
chr13:31192162-31193325	chr13	+	31192324	31193026	True	NM_005800,NM_002128	chr13,chr13	+,-	USPL1,HMGB1	-546,-152243
chr8:6690343-6690879	chr8	+	6690376	6690812	True	NM_207411,NM_018361	chr8,chr8	-,+	XKR5,AGPAT5	2404,-124549
chr22:45099091-45099301	chr22	+	45099137	45099341	True	NM_181333,NM_181334,NM_032287	chr22,chr22,chr22	+,+,-	PRR5,PRR5-ARHGAP8,LDOC1L	-1110,-806,-205132
chr22:43255076-43255407	chr22	+	43255087	43255334	True	NM_001142293,NM_014570,NR_029422	chr22,chr22,chr22	-,-,+	ARFGAP3,ARFGAP3,RNU12	-1679,-1679,-243894
chr12:512043-513162	chr12	+	512042	513184	True	NM_001130146,NM_001042603,NM_032358	chr12,chr12,chr12	+,-,+	CCDC77,KDM5A,CCDC77	-1354,-13422,-1354
chr1:112283253-112283485	chr1	+	112283263	112283335	True	NM_019099,NM_007204	chr1,chr1	-,+	C1orf183,DDX20	-1217,14854
chr13:78308744-78309604	chr13	+	78308744	78309581	True	NR_037438,NM_144595	chr13,chr13	-,+	MIR3665,SLAIN1	-36493,5713
chr11:22647257-22647607	chr11	+	22647281	22647633	True	NM_001143830,NM_022725	chr11,chr11	+,-	GAS2,FANCF	40526,-2
chr11:82903422-82904481	chr11	+	82903509	82904366	True	NM_182603,NM_021825	chr11,chr11	+,-	ANKRD42,CCDC90B	924,93061
chr17:79907705-79908726	chr17	+	79907712	79908766	True	NM_001145113,NR_015454	chr17,chr17	-,+	MYADML2,LOC92659	-2603,-22059
chr4:68830319-68831771	chr4	+	68830492	68831519	True	NM_001114387,NR_015446,NM_182606	chr4,chr4,chr4	-,+,-	TMPRSS11A,FTLP10,TMPRSS11A	-1260,216490,-1260
chr14:90862967-90863249	chr14	+	90862967	90863227	True	NM_006888,NM_001166106,NM_199043	chr14,chr14,chr14	+,+,-	CALM1,CALM1,C14orf102	99,1378,-64688
chr22:39641534-39641745	chr22	+	39641600	39641742	True	NM_145731,NM_002608,NM_033016	chr22,chr22,chr22	+,-,-	SYNGR1,PDGFB,PDGFB	104211,-643,-4686
chr8:54756538-54757364	chr8	+	54756935	54757413	True	NM_015941,NM_170587,NM_213619,NM_213620	chr8,chr8,chr8,chr8	-,+,-,-	ATP6V1H,RGS20,ATP6V1H,ATP6V1H	-1085,6954,-1085,-1388
chr2:88475471-88477424	chr2	+	88475713	88477335	True	NM_018271,NM_001443	chr2,chr2	+,-	THNSL2,FABP1	-5929,-48063
chr2:20845090-20846698	chr2	+	20845150	20846654	True	NM_022460,NM_182828	chr2,chr2	-,+	HS1BP3,GDF7	4260,19769
chr2:27594065-27594366	chr2	+	27594093	27594413	True	NM_001201459,NM_001034116,NM_014748,NM_015636,NM_144631,NM_172195	chr2,chr2,chr2,chr2,chr2,chr2	-,-,+,-,-,-	ZNF513,EIF2B4,SNX17,EIF2B4,ZNF513,EIF2B4	8948,-769,-755,-769,9248,-1174
chr6:130007140-130007981	chr6	+	130007210	130007938	True	NM_001007102,NM_033515	chr6,chr6	+,-	L3MBTL3,ARHGAP18	331789,23484
chr22:51040565-51041841	chr22	+	51040584	51041768	True	NM_016431,NM_012324,NM_005198	chr22,chr22,chr22	+,+,-	MAPK8IP2,MAPK8IP2,CHKB	37,-1504,-19156
chr20:43581257-43581950	chr20	+	43581291	43581989	True	NM_006809,NM_006282	chr20,chr20	-,+	TOMM34,STK4	7175,13130
chr16:84327614-84327867	chr16	+	84327709	84327903	True	NM_021197,NM_172347	chr16,chr16	+,-	WFDC1,KCNG4	497,-54353
chr22:39716399-39717074	chr22	+	39716639	39716731	True	NM_001033853,NM_000967,NR_000028,NR_002439,NR_000026,NR_000027,NM_145731	chr22,chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,-,-,+	RPL3,RPL3,SNORD83B,SNORD43,RNU86,SNORD83A,SYNGR1	-969,-969,-6723,-1521,-3738,-5327,29222
chr19:54928999-54929317	chr19	+	54929019	54929317	True	NM_001201461,NM_198988,NM_020659,NM_001005367	chr19,chr19,chr19,chr19	+,-,+,+	TTYH1,LENG9,TTYH1,TTYH1	-2465,45627,-2465,-2465
chr16:28635907-28636655	chr16	+	28636205	28636277	True	NM_001199142,NM_177536	chr16,chr16	+,-	EIF3C,SULT1A1	63601,-1339
chr16:28635907-28636655	chr16	-	15488299	15488362	False	NM_001128423,NR_037466,NM_173803	chr16,chr16,chr16	+,-,+	MPV17L,MIR3180-4,MPV17L	1248,-239440,1248
chr17:62074443-62074928	chr17	+	62074464	62074738	True	NM_001164257,NM_001191029,NM_001191031,NM_001191030,NM_000873	chr17,chr17,chr17,chr17,chr17	+,+,+,+,-	C17orf72,C17orf72,C17orf72,C17orf72,ICAM2	972,972,972,972,9595
chr17:16400145-16401046	chr17	+	16400149	16401085	True	NR_003054,NM_207387,NM_001113567	chr17,chr17,chr17	+,-,-	SNORD65,C17orf76,C17orf76	-55672,-4669,-4669
chr12:15365286-15366371	chr12	+	15365614	15366359	True	NM_002848,NM_032918,NM_001190726	chr12,chr12,chr12	+,-,-	PTPRO,RERG,RERG	109127,8102,8102
chr6:123109389-123109739	chr6	+	123109442	123109694	True	NM_006714,NM_001446,NM_020755	chr6,chr6,chr6	+,+,-	SMPDL3A,FABP7,SERINC1	276,-8859,-316490
chr8:87226228-87227636	chr8	+	87226363	87227517	True	NM_152565,NM_138817	chr8,chr8	+,-	ATP6V0D2,SLC7A13	-115284,15144
chr2:220083820-220084037	chr2	+	220083847	220084037	True	NM_018089,NM_005689	chr2,chr2	+,-	ANKZF1,ABCB6	10441,-135
chr17:77479964-77480388	chr17	+	77480050	77480281	True	NM_178543,NM_001082575	chr17,chr17	+,-	ENPP7,RBFOX3	224600,-1487
chr15:65712578-65713410	chr15	+	65712618	65713408	True	NM_020962,NM_016395	chr15,chr15	-,+	IGDCC4,PTPLAD1	2052,109418
chr12:44054359-44055329	chr12	+	44054359	44054946	True	NM_001098615,NM_001114182	chr12,chr12	-,+	PUS7L,IRAK4	97672,97800
chr9:138800993-138801525	chr9	+	138800993	138801359	True	NM_015447,NM_020822	chr9,chr9	-,+	CAMSAP1,KCNT1	-1988,-207015
chr6:167585773-167587192	chr6	+	167585940	167587137	True	NM_005299,NM_001145121	chr6,chr6	-,+	GPR31,TCP10L2	-14621,-1910
chr6:167585773-167587192	chr6	-	167794927	167794977	False	NM_004610,NM_031949	chr6,chr6	-,+	TCP10,TTLL2	3071,-56404
chr20:52194505-52195292	chr20	+	52194743	52195317	True	NM_006526,NM_001193421	chr20,chr20	-,+	ZNF217,TSHZ2	4369,-392985
chr17:11145562-11145882	chr17	+	11145589	11145907	True	NM_001101387,NM_001173461,NM_001173462,NM_207386	chr17,chr17,chr17,chr17	-,+,+,+	PIRT,SHISA6,SHISA6,SHISA6	-404171,-909,-909,-909
chr5:136832913-136833353	chr5	+	136833067	136833375	True	NM_004598,NR_002713	chr5,chr5	-,+	SPOCK1,NPY6R	1693,303506
chr19:49458594-49459001	chr19	+	49458600	49459048	True	NM_000146,NM_004324,NM_138764,NM_001161587,NM_138763,NM_138761,NR_027882	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,-,+,+,+	FTL,BAX,BAX,GYS1,BAX,BAX,BAX	9517,-534,-534,37612,-534,-534,-534
chr7:100302432-100302649	chr7	+	100302432	100302530	True	NM_005837,NM_022574	chr7,chr7	+,-	POP7,GIGYF1	1145,-15562
chr6:157803587-157804755	chr6	+	157803755	157804687	True	NM_018452,NM_153746,NM_024630	chr6,chr6,chr6	-,+,+	C6orf35,ZDHHC14,ZDHHC14	-58502,-1258,-1258
chr9:95432668-95433188	chr9	+	95432760	95433147	True	NM_022755,NR_036505	chr9,chr9	-,+	IPPK,LOC100128361	-213,-52487
chr4:3551638-3552018	chr4	+	3551746	3551818	True	NM_002337,NM_173660	chr4,chr4	-,+	LRPAP1,DOK7	-17522,-86764
chr1:218519636-218520235	chr1	+	218519640	218520175	True	NM_003238,NM_018040,NM_001135599	chr1,chr1,chr1	+,-,+	TGFB2,GPATCH2,TGFB2	-1015,-715231,-1015
chr6:39082679-39082945	chr6	+	39082681	39082895	True	NM_018322,NM_002062	chr6,chr6	-,+	C6orf64,GLP1R	20,-66175
chr16:27216882-27218448	chr16	+	27217175	27218285	True	NM_024773,NM_145080,NM_001145348	chr16,chr16,chr16	+,-,+	JMJD5,NSMCE1,JMJD5	-2420,61878,-1931
chr6:14727695-14729651	chr6	+	14728104	14729640	True	NM_001031713,NM_004973	chr6,chr6	-,+	CCDC90A,JARID2	-913315,516886
chr4:9651541-9652022	chr4	+	9651708	9651884	True	NR_031688,NM_000798	chr4,chr4	-,+	MIR548I2,DRD5	-93771,131373
chr17:74350631-74350900	chr17	+	74350726	74350790	True	NM_002766,NM_001142601	chr17,chr17	-,+	PRPSAP1,SPHK1	-496,29899
chr2:26534299-26534510	chr2	+	26534317	26534555	True	NM_001145168,NM_001145169,NM_033505	chr2,chr2,chr2	-,-,+	GPR113,GPR113,EPT1	7412,7465,34398
chr1:43130562-43131611	chr1	+	43130620	43131609	True	NM_006347,NM_001123395	chr1,chr1	+,-	PPIH,CLDN19	-6623,74374
chr8:144239715-144239984	chr8	+	144239756	144239882	True	NM_178172,NM_001135655,NM_002347,NM_001130478	chr8,chr8,chr8,chr8	+,-,-,-	GPIHBP1,LY6H,LY6H,LY6H	55185,1923,1625,2221
chr1:2038137-2038354	chr1	+	2038199	2038403	True	NR_024445,NM_001033582	chr1,chr1	-,+	LOC100128003,PRKCZ	86671,-2095
chr15:57025574-57025811	chr15	+	57025646	57025850	True	NM_001002844,NM_017661,NM_001002843,NM_003205	chr15,chr15,chr15,chr15	-,-,-,+	ZNF280D,ZNF280D,ZNF280D,TCF12	-13,-13,-13,184982
chr15:62359005-62359380	chr15	+	62359015	62359434	True	NM_017684,NM_001018088,NM_018080,NM_020821,NM_207322	chr15,chr15,chr15,chr15,chr15	-,-,-,-,+	VPS13C,VPS13C,VPS13C,VPS13C,C2CD4A	-6351,-6351,-6351,-6351,-14
chr19:41766375-41766988	chr19	+	41766502	41767031	True	NM_144732,NM_007040,NM_000660	chr19,chr19,chr19	+,+,-	HNRNPUL1,HNRNPUL1,TGFB1	1359,3088,92857
chr19:29382796-29383780	chr19	+	29382863	29383776	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	72261,320410
chrY:10022285-10023403	chrY	+	10022376	10023422	True	NR_003593,NR_003589	chrY,chrY	+,-	TTTY23B,TTTY1B	-274021,-410448
chr1:236956539-236956931	chr1	+	236956602	236956894	True	NM_018072,NM_000254	chr1,chr1	-,+	HEATR1,MTR	-188761,1686
chr10:23482535-23484030	chr10	+	23482566	23483859	True	NM_153714,NM_178161	chr10,chr10	-,+	C10orf67,PTF1A	149963,-1157
chr19:32895701-32896092	chr19	+	32895825	32896051	True	NM_207325,NM_032139,NM_001172774	chr19,chr19,chr19	+,-,+	DPY19L3,ANKRD27,DPY19L3	970,270101,603
chr18:611039-611770	chr18	+	611175	611804	True	NM_199167,NM_001012716	chr18,chr18	+,-	CLUL1,C18orf56	4895,46586
chr6:170629642-170630760	chr6	+	170629723	170630800	True	NM_032448,NM_005618	chr6,chr6	+,-	FAM120B,DLL1	-13940,-30026
chr19:8408895-8410722	chr19	+	8409070	8410327	True	NM_001039667,NM_198471	chr19,chr19	+,-	ANGPTL4,KANK3	18683,-924
chr14:105452776-105453644	chr14	+	105453006	105453664	True	NM_174891,NM_138420	chr14,chr14	+,-	C14orf79,AHNAK2	-441,-8312
chr14:24775844-24776618	chr14	+	24775846	24776590	True	NM_001164692,NM_174913,NM_001136050,NM_019839,NM_138452,NM_001143919,NM_181657,NM_014430	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,+,-,+,-,+,+,-	LTB4R2,C14orf21,DHRS1,LTB4R2,DHRS1,LTB4R,LTB4R,CIDEB	2766,-6799,-6807,2766,-7180,4114,5722,4036
chr16:211903-212462	chr16	+	212255	212493	True	NM_001077350,NM_001003938,NM_005332	chr16,chr16,chr16	-,+,+	NPRL3,HBM,HBZ	-23583,3479,-9462
chr9:90629956-90630849	chr9	+	90630133	90630454	True	NM_178432,NM_001145124	chr9,chr9	-,+	CDK20,FAM75C1	-40438,-97307
chr3:150321772-150322279	chr3	+	150321910	150322305	True	NM_016275,NM_014445	chr3,chr3	+,-	SELT,SERP1	-895,-57482
chr12:113769115-113769887	chr12	+	113769251	113769859	True	NM_001159727,NM_024959	chr12,chr12	+,-	PLBD2,SLC24A6	26511,3116
chr16:87973453-87973830	chr16	+	87973463	87973575	True	NM_001173539,NM_001739	chr16,chr16	+,-	BANP,CA5A	11462,-3351
chr7:143532563-143533299	chr7	+	143532686	143533330	True	NR_015421,NM_001004685	chr7,chr7	-,+	LOC154761,OR2F2	530,98995
chr7:143532563-143533299	chr7	-	143318515	143319159	False	NM_178561,NM_001130025,NM_173678	chr7,chr7,chr7	-,+,+	CTAGE6P,FAM115C,FAM115C	135734,-521,-24
chr7:143532563-143533299	chr7	-	143398050	143398348	False	NM_178561,NM_001130026	chr7,chr7	-,+	CTAGE6P,FAM115C	56545,14590
chr2:37193960-37194162	chr2	+	37193990	37194158	True	NM_174931,NM_003162	chr2,chr2	+,-	CCDC75,STRN	117435,-375
chr15:73755080-73755801	chr15	+	73755247	73755834	True	NM_001042367,NM_005477	chr15,chr15	+,-	C15orf60,HCN4	-19809,-93642
chr1:146496457-146497517	chr1	+	146496470	146497559	True	NR_024442,NR_002305	chr1,chr1	-,+	LOC728989,PDIA3P	17090,151870
chr8:23335501-23337011	chr8	+	23335668	23336758	True	NM_016612,NM_001128930	chr8,chr8	+,-	SLC25A37,ENTPD4	49604,-20424
chr4:170536541-170537723	chr4	+	170536737	170537265	True	NM_001199398,NM_001199399,NM_001829,NM_001199397,NM_012224,NM_173872,NM_001199400	chr4,chr4,chr4,chr4,chr4,chr4,chr4	-,-,+,-,-,+,-	NEK1,NEK1,CLCN3,NEK1,NEK1,CLCN3,NEK1	-2959,-2959,4456,-2959,-2959,4456,-2959
chr17:76340501-76341469	chr17	+	76340770	76341196	True	NM_003955,NM_024419	chr17,chr17	-,+	SOCS3,PGS1	15012,33538
chr19:24268428-24269198	chr19	+	24268602	24269110	True	NM_203282,NR_003603	chr19,chr19	+,-	ZNF254,LOC100101266	865,77192
chr5:86180718-86181229	chr5	+	86180816	86181275	True	NR_036243,NR_037402	chr5,chr5	-,+	MIR4280,MIR3607	229553,-264566
chr19:19927257-19928727	chr19	+	19927917	19928627	True	NM_001099269,NM_021047,NM_001145404	chr19,chr19,chr19	-,+,-	ZNF506,ZNF253,ZNF506	3988,48086,3988
chr10:35459190-35460258	chr10	+	35459729	35460088	True	NM_001198777,NM_182769,NM_182770,NM_182771,NM_182772	chr10,chr10,chr10,chr10,chr10	-,+,+,+,+	CUL2,CREM,CREM,CREM,CREM	-80159,4435,4435,-3318,-3318
chr8:22091488-22091800	chr8	+	22091706	22091834	True	NM_001722,NM_001099335,NM_014759	chr8,chr8,chr8	+,-,-	POLR3D,PHYHIP,PHYHIP	10784,-1855,-1855
chr3:184037368-184037609	chr3	+	184037402	184037464	True	NM_004953,NM_198244,NM_198242,NM_198241,NM_001194946,NM_001194947,NM_001171087,NR_003055,NM_182917	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,+,+,-,+,+	EIF4G1,EIF4G1,EIF4G1,EIF4G1,EIF4G1,EIF4G1,CLCN2,SNORD66,EIF4G1	636,-5170,-5170,-5170,-5170,-5170,41977,6019,-4501
chr1:39308749-39309112	chr1	+	39309001	39309122	True	NM_001136275,NM_022157	chr1,chr1	+,-	AKIRIN1,RRAGC	147793,16273
chr8:20041903-20042498	chr8	+	20042003	20042523	True	NM_003053,NM_001135691,NM_001693,NM_001142325,NM_001142324	chr8,chr8,chr8,chr8,chr8	-,-,+,-,-	SLC18A1,SLC18A1,ATP6V1B2,SLC18A1,SLC18A1	-1286,-1286,12180,-1286,-1286
chr9:125873998-125874420	chr9	+	125874033	125874269	True	NR_030331,NM_005294,NR_026677	chr9,chr9,chr9	-,+,-	MIR600,GPR21,NCRNA00287	-111,-77245,3537
chrX:51927597-51927973	chrX	+	51927612	51927895	True	NM_001098800,NM_177537,NM_177535,NR_003712,NM_030801,NR_003711	chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,-,+,+	MAGED4,MAGED4B,MAGED4B,SNORA11E,MAGED4B,SNORA11D	112,23,23,5999,23,5822
chrX:51927597-51927973	chrX	-	51812391	51812674	False	NM_001098800,NM_177537,NM_177535,NR_003712,NM_030801,NR_003711	chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,+,-,-	MAGED4,MAGED4B,MAGED4B,SNORA11E,MAGED4B,SNORA11D	-112,-23,-23,-5999,-23,-5822
chr12:96393497-96393955	chr12	+	96393653	96393899	True	NM_152435,NM_002108	chr12,chr12	+,-	AMDHD1,HAL	-56645,-3582
chr17:39846372-39847384	chr17	+	39846372	39847371	True	NM_005801,NM_001079870	chr17,chr17	+,-	EIF1,HAP1	-1296,43577
chr4:89193742-89194144	chr4	+	89193885	89194187	True	NM_001165136,NM_152542	chr4,chr4	+,-	HERC6,PPM1K	105703,11751
chr19:52004467-52004771	chr19	+	52004559	52004785	True	NM_053003,NM_033329,NM_001080405	chr19,chr19,chr19	-,-,+	SIGLEC12,SIGLEC12,CEACAM18	308,-912,-24787
chr17:75879921-75880191	chr17	+	75879934	75880160	True	NM_001142640,NR_028337	chr17,chr17	+,-	TNRC6C,FLJ45079	120157,59
chr21:27012666-27012896	chr21	+	27012733	27012952	True	NM_021219,NM_080794	chr21,chr21	+,-	JAM2,MRPL39	-1196,-32932
chr3:112050449-112051160	chr3	+	112050762	112051076	True	NM_005944,NM_183061,NM_001004196	chr3,chr3,chr3	+,-,+	CD200,SLC9A10,CD200	839,-37688,839
chrY:4976710-4978331	chrY	+	4976943	4977726	True	NM_032973,NR_001540	chrY,chrY	+,-	PCDH11Y,TTTY23	-52870,1133989
chrY:4976710-4978331	chrX	+	91142178	91142259	False	NM_001168363,NM_004538	chrX,chrX	+,-	PCDH11X,NAP1L3	-51781,1786486
chr16:31471412-31471671	chr16	+	31471416	31471669	True	NM_001136509,NM_024742,NM_001105247	chr16,chr16,chr16	-,+,+	ZNF843,ARMC5,ARMC5	-17068,-1150,-1150
chr14:24733228-24733630	chr14	+	24733291	24733629	True	NM_000359,NM_004581,NM_016576,NM_182836	chr14,chr14,chr14,chr14	-,-,+,-	TGM1,RABGGTA,GMPR2,RABGGTA	-875,7164,-31239,7224
chr13:84454322-84454825	chr13	+	84454366	84454736	True	NM_015567,NM_052910	chr13,chr13	+,-	SLITRK5,SLITRK1	3870133,1842
chr21:40982487-40983350	chr21	+	40982678	40983392	True	NR_026543,NR_026542,NM_006057	chr21,chr21,chr21	-,-,+	C21orf88,C21orf88,B3GALT5	1407,1407,45861
chr1:205171041-205172965	chr1	+	205171373	205172251	True	NM_014858,NM_015375,NM_199462	chr1,chr1,chr1	+,-,-	TMCC2,DSTYK,DSTYK	24786,8536,8536
chr8:11727875-11728651	chr8	+	11728204	11728621	True	NM_001908,NM_147782,NM_147783,NM_147780,NM_147781,NM_004462	chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,-,+	CTSB,CTSB,CTSB,CTSB,CTSB,FDFT1	-2558,-2558,-2558,-2558,-2558,-68071
chr1:151484523-151485721	chr1	+	151484576	151485718	True	NM_145796,NM_020770	chr1,chr1	-,+	POGZ,CGN	-52635,-765
chr17:34416086-34416534	chr17	+	34416177	34416545	True	NM_002984,NM_002983	chr17,chr17	+,-	CCL4,CCL3	14674,1011
chr17:73939229-73940237	chr17	+	73939395	73939907	True	NM_001080542,NM_001113324	chr17,chr17	-,+	FBF1,C17orf106	-2276,35390
chr1:50485407-50485796	chr1	+	50485471	50485839	True	NM_032785,NM_001144777	chr1,chr1	-,+	AGBL4,ELAVL4	3837,27846
chr21:43428509-43429303	chr21	+	43428769	43429208	True	NR_027273,NM_020727,NM_001098402,NM_001098403	chr21,chr21,chr21,chr21	+,-,-,-	C21orf121,ZNF295,ZNF295,ZNF295	12904,1338,1338,1338
chr5:172386467-172387056	chr5	+	172386567	172387099	True	NM_016093,NR_026682,NR_026683	chr5,chr5,chr5	+,-,-	RPL26L1,LOC100268168,LOC100268168	-179,-196,-789
chr16:75682576-75682868	chr16	+	75682576	75682852	True	NM_005548,NM_001130089,NM_018975	chr16,chr16,chr16	-,-,+	KARS,KARS,TERF2IP	-991,-991,-995
chr7:73869774-73870416	chr7	+	73869914	73870460	True	NM_016328,NM_001199207,NM_005685,NM_181471	chr7,chr7,chr7,chr7	+,+,+,-	GTF2IRD1,GTF2IRD1,GTF2IRD1,RFC2	-1845,-1845,-1845,-201176
chr3:187928180-187929230	chr3	+	187928304	187929238	True	NM_005578,NR_036497	chr3,chr3	+,-	LPP,LOC339929	1482,-56428
chr17:19551212-19551511	chr17	+	19551214	19551500	True	NM_001099646,NM_000382,NM_001031806	chr17,chr17,chr17	-,+,+	SLC47A2,ALDH3A2,ALDH3A2	68593,563,563
chr8:95486078-95487037	chr8	+	95486077	95486860	True	NM_001205262,NM_012415,NM_001034915	chr8,chr8,chr8	-,-,+	RAD54B,RAD54B,ESRP1	533,533,166503
chr8:120837341-120839039	chr8	+	120837350	120838788	True	NM_003184,NM_022783	chr8,chr8	-,+	TAF2,DEPTOR	6340,47111
chr1:25670849-25671655	chr1	+	25670848	25671557	True	NM_020485,NM_014313	chr1,chr1	-,+	RHCE,TMEM50A	75856,-6119
chr7:56371473-56372569	chr7	+	56371759	56372587	True	NR_029420,NR_026929	chr7,chr7	-,+	LOC650226,DKFZp434L192	143531,191328
chr1:92764267-92764480	chr1	+	92764316	92764506	True	NM_053274,NM_024813	chr1,chr1	-,+	GLMN,RPAP2	110,15
chr1:150659909-150661081	chr1	+	150660139	150660951	True	NM_018178,NR_036211	chr1,chr1	-,+	GOLPH3L,MIR4257	8772,-135798
chr19:39990137-39990855	chr19	+	39990356	39990773	True	NM_016941,NM_152361,NM_203486	chr19,chr19,chr19	+,-,+	DLL3,EID2B,DLL3	-850,32778,-850
chr1:205180931-205181434	chr1	+	205180982	205181428	True	NM_014858,NM_015375,NM_199462	chr1,chr1,chr1	+,-,-	TMCC2,DSTYK,DSTYK	15609,-255,-255
chr9:101896922-101898227	chr9	+	101896940	101897965	True	NM_004612,NM_033087	chr9,chr9	+,-	TGFBR1,ALG2	-29579,86332
chr1:62780159-62780698	chr1	+	62780204	62780659	True	NM_181712,NM_019079	chr1,chr1	-,+	KANK4,L1TD1	4486,-119783
chr2:132554950-132555313	chr2	+	132555001	132555361	True	NM_013310,NM_214461	chr2,chr2	+,-	C2orf27A,C2orf27B	-74988,3923
chr2:132554950-132555313	chr2	-	132522326	132522376	False	NM_013310,NM_214461	chr2,chr2	+,-	C2orf27A,C2orf27B	-42313,36908
chr8:102506792-102507298	chr8	+	102506903	102507299	True	NM_016096,NM_024915	chr8,chr8	-,+	ZNF706,GRHL2	-288943,-2292
chr2:145275072-145275338	chr2	+	145275234	145275332	True	NR_033258,NM_001171653,NR_033870,NM_014795	chr2,chr2,chr2,chr2	-,-,+,-	ZEB2,ZEB2,DKFZp686O1327,ZEB2	2676,2676,150201,2676
chr6:34712210-34713375	chr6	+	34712401	34713350	True	NM_024294,NM_003093	chr6,chr6	-,+	C6orf106,SNRPC	-47776,11520
chr15:81281263-81281892	chr15	+	81281284	81281822	True	NM_022566,NM_015154	chr15,chr15	+,-	MESDC1,MESDC2	11472,433
chr2:187589993-187590693	chr2	+	187590107	187590735	True	NM_182521,NM_177454	chr2,chr2	-,+	ZSWIM2,FAM171B	123212,-31376
chr19:1401728-1402206	chr19	+	1401767	1402233	True	NM_138924,NM_018959,NM_170711,NM_000156	chr19,chr19,chr19,chr19	-,+,+,-	GAMT,DAZAP1,DAZAP1,GAMT	-215,5350,5350,-215
chr2:74712688-74714638	chr2	+	74713068	74714309	True	NM_032779,NR_027749,NM_022492	chr2,chr2,chr2	-,+,+	CCDC142,TTC31,TTC31	-2711,-2919,-2919
chr3:50340297-50341281	chr3	+	50340320	50341320	True	NM_001200016,NM_001200029,NM_153281,NM_003549,NM_153282,NM_153283,NM_033159,NM_012191,NM_001200018,NM_153285,NM_007312,NM_001200030,NM_153215,NM_001200031,NM_001200032	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,-,-,-,-,-,-,-,-,+,-,-	NAT6,HYAL3,HYAL1,HYAL3,HYAL1,HYAL1,HYAL1,NAT6,NAT6,HYAL1,HYAL1,HYAL3,C3orf45,HYAL3,HYAL3	-3468,-4027,8542,-3421,18,18,18,-3468,-4000,18,18,-3421,-23853,-3421,-3421
chr11:62751622-62751955	chr11	+	62751627	62751858	True	NR_037193,NM_153278,NM_153277,NM_153276,NM_004790	chr11,chr11,chr11,chr11,chr11	+,-,-,-,-	SLC3A2,SLC22A6,SLC22A6,SLC22A6,SLC22A6	-102507,661,661,661,661
chr18:10694548-10696231	chr18	+	10695026	10696106	True	NM_003826,NM_022068	chr18,chr18	+,-	NAPG,FAM38B	-169205,452705
chr3:25469989-25471101	chr3	+	25470030	25471129	True	NM_016152,NM_000965,NM_001068	chr3,chr3,chr3	+,+,-	RARB,RARB,TOP2B	-335,-255,234709
chr3:38177854-38178106	chr3	+	38177854	38178154	True	NM_001172566,NM_001172567,NR_024024,NM_001172568,NM_001172569,NM_001130410,NM_001607,NM_002468	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,-,+,+,-,-,+	MYD88,MYD88,ACAA1,MYD88,MYD88,ACAA1,ACAA1,MYD88	1814,1814,629,1814,1814,629,629,1814
chr15:40063079-40063396	chr15	+	40063114	40063391	True	NM_001013703,NM_152597	chr15,chr15	+,-	EIF2AK4,FSIP1	162955,11705
chr10:118112559-118114090	chr10	+	118112802	118113699	True	NM_005264,NM_198515	chr10,chr10	-,+	GFRA1,C10orf96	-79676,-28918
chr21:47704249-47705660	chr21	+	47704413	47705700	True	NM_003906,NM_001006114,NM_058181	chr21,chr21,chr21	-,+,+	MCM3AP,YBEY,YBEY	117,566,566
chr5:150136222-150137387	chr5	+	150136395	150137213	True	NM_032947,NM_001135644,NM_001135643,NM_016221	chr5,chr5,chr5,chr5	+,-,-,-	C5orf62,DCTN4,DCTN4,DCTN4	20294,921,1496,1496
chr18:21241595-21242255	chr18	+	21241688	21242235	True	NM_001127717,NM_173505	chr18,chr18	+,-	LAMA3,ANKRD29	27326,664
chr6:108582591-108582938	chr6	+	108582596	108582931	True	NM_145315,NM_152827,NM_003795	chr6,chr6,chr6	+,-,-	LACE1,SNX3,SNX3	33166,-132,-132
chr1:204119519-204120505	chr1	+	204119729	204120406	True	NM_018208,NM_005686	chr1,chr1	-,+	ETNK2,SOX13	951,-77534
chrX:11682827-11683056	chrX	+	11682867	11683037	True	NM_078628,NM_013427,NM_006125	chrX,chrX,chrX	+,-,-	MSL3,ARHGAP6,ARHGAP6	93240,834,834
chr16:15491768-15492748	chr16	+	15491779	15492397	True	NM_001128423,NR_037466,NM_173803	chr16,chr16,chr16	+,-,+	MPV17L,MIR3180-4,MPV17L	-2219,-242920,-2219
chr3:57540637-57541642	chr3	+	57541424	57541507	True	NM_178504,NM_177966	chr3,chr3	-,+	DNAH12,PDE12	-11353,473
chr12:111182661-111183016	chr12	+	111182694	111183060	True	NM_152591,NM_002710	chr12,chr12	+,-	CCDC63,PPP1CC	101750,-1937
chr8:97655038-97656826	chr8	+	97655147	97656844	True	NM_016134,NM_015942	chr8,chr8	+,-	PGCP,MTERFD1	654,-381351
chr17:4403975-4404282	chr17	+	4404025	4404279	True	NM_001124758,NM_001105538	chr17,chr17	+,-	SPNS2,MYBBP1A	-1948,54452
chr8:18870744-18870968	chr8	+	18870746	18870955	True	NM_001174160,NM_015310	chr8,chr8	+,-	SH2D4A,PSD3	300125,291
chr5:33970303-33971665	chr5	+	33970387	33971540	True	NM_016568,NM_016180	chr5,chr5	+,-	RXFP3,SLC45A2	-33947,13290
chr2:220363558-220365547	chr2	+	220363573	220365517	True	NM_013335,NM_205847,NM_001195731	chr2,chr2,chr2	+,+,-	GMPPA,GMPPA,CHPF	-37,-7,42352
chr6:150922333-150924071	chr6	+	150922530	150923904	True	NM_001029884,NM_024518	chr6,chr6	+,-	PLEKHG1,ULBP3	-1582,-532328
chr6:108279287-108279622	chr6	+	108279459	108279655	True	NM_007214,NM_003269	chr6,chr6	-,+	SEC63,NR2E1	7,207559
chr12:53298381-53298676	chr12	+	53298598	53298686	True	NM_199187,NM_002273	chr12,chr12	+,-	KRT18,KRT8	43968,232
chr8:41505707-41506152	chr8	+	41505994	41506142	True	NM_152568,NM_178819	chr8,chr8	-,+	NKX6-3,AGPAT6	-1116,-70338
chr22:25832669-25833570	chr22	+	25832730	25833542	True	NM_001135772,NR_033733	chr22,chr22	-,+	LRP5L,CRYBB2P1	-55186,10511
chr13:52591649-52593516	chr13	+	52591980	52593301	True	NR_036571,NM_000053,NM_021645,NM_001005918,NM_001004127	chr13,chr13,chr13,chr13,chr13	+,-,+,-,+	ALG11,ATP7B,UTP14C,ATP7B,ALG11	-5508,-6350,5525,-6350,-5508
chr20:15220323-15220637	chr20	+	15220332	15220572	True	NR_037841,NM_001033087	chr20,chr20	-,+	NCRNA00186,MACROD2	-310171,-42887
chr6:9663427-9664737	chr6	+	9663430	9664213	True	NM_001032280,NR_033910	chr6,chr6	-,+	TFAP2A,LOC100130275	748454,748337
chr6:39680178-39680909	chr6	+	39680183	39680902	True	NM_145027,NM_001201427	chr6,chr6	-,+	KIF6,DAAM2	12329,79256
chr13:52703346-52703645	chr13	+	52703421	52703681	True	NM_199289,NM_021645	chr13,chr13	-,+	NEK5,UTP14C	-207,-104645
chr19:1028865-1030234	chr19	+	1028924	1030144	True	NM_004368,NM_033420,NM_001033026,NM_201277,NM_019112	chr19,chr19,chr19,chr19,chr19	+,-,-,+,+	CNN2,C19orf6,C19orf6,CNN2,ABCA7	-2677,-7783,-7783,-2677,9957
chr12:95947245-95949239	chr12	+	95947380	95948602	True	NM_032147,NM_006838,NM_001042403	chr12,chr12,chr12	-,+,-	USP44,METAP2,USP44	-2117,-79609,-4760
chr14:55591601-55591917	chr14	+	55591662	55591899	True	NM_002306,NM_001146015,NM_001177388	chr14,chr14,chr14	+,-,+	LGALS3,DLGAP5,LGALS3	4035,66554,4035
chr3:108227805-108229064	chr3	+	108227904	108228977	True	NM_014648,NM_014981	chr3,chr3	+,-	DZIP3,MYH15	79359,19242
chr10:43934612-43934870	chr10	+	43934731	43934785	True	NR_026693,NM_001098204	chr10,chr10	+,-	ZNF487P,HNRNPF	-2208,-30035
chr1:1332545-1333858	chr1	+	1332566	1333760	True	NM_001039577,NM_017971,NR_015434,NM_030937	chr1,chr1,chr1,chr1	-,-,+,-	CCNL2,MRPL20,LOC148413,CCNL2	1008,8983,1149,1008
chr16:31227031-31227253	chr16	+	31227123	31227269	True	NM_001008274,NM_152901	chr16,chr16	+,-	TRIM72,PYDC1	-1832,1176
chr4:174452833-174453389	chr4	+	174452929	174453369	True	NR_003679,NM_021973	chr4,chr4	+,-	NBLA00301,HAND2	-1371,-1551
chr2:240324663-240325998	chr2	+	240324686	240326024	True	NR_036229,NM_006037	chr2,chr2	+,-	MIR4269,HDAC4	-97580,-2043
chrX:71359623-71359918	chrX	+	71359682	71359934	True	NM_207422,NM_001024455	chrX,chrX	+,-	FLJ44635,RGAG4	4099,-7931
chr12:66695071-66695841	chr12	+	66695143	66695841	True	NM_016056,NM_033647	chr12,chr12	-,+	TMBIM4,HELB	-131336,514
chr11:94014250-94014697	chr11	+	94014301	94014667	True	NM_001199206,NM_016540	chr11,chr11	+,-	FOLR4,GPR83	24135,119968
chr7:27169134-27169611	chr7	+	27169299	27169563	True	NM_002141,NM_153631,NR_002795	chr7,chr7,chr7	-,-,+	HOXA4,HOXA3,HOXA11-AS1	886,-2660,55463
chr19:53872127-53872773	chr19	+	53872205	53872807	True	NM_033341,NR_003699	chr19,chr19	-,+	BIRC8,ZNF525	-77330,-3288
chr3:186381403-186382950	chr3	+	186381566	186382706	True	NM_000412,NM_001134415	chr3,chr3	+,-	HRG,TBCCD1	1091,-93234
chr13:78117511-78117974	chr13	+	78117537	78118014	True	NM_003843,NM_144777,NR_037438,NM_001160706	chr13,chr13,chr13,chr13	+,+,-,+	SCEL,SCEL,MIR3665,SCEL	-7787,-7787,154287,-7787
chr3:154797906-154798175	chr3	+	154797921	154798127	True	NM_007288,NM_007289,NR_037902,NM_000902,NM_007287	chr3,chr3,chr3,chr3,chr3	+,+,-,+,+	MME,MME,LOC100507537,MME,MME	-19,-33,213412,-536,-267
chr2:228187673-228189572	chr2	+	228187767	228189564	True	NM_020194,NM_024795	chr2,chr2	+,-	MFF,TM4SF20	2663,54508
chr6:36303568-36304425	chr6	+	36303598	36304430	True	NM_001010903,NM_001145717	chr6,chr6	-,+	C6orf222,PNPLA1	282,-65425
chr1:166958768-166959818	chr1	+	166958989	166959421	True	NM_199351,NM_032858	chr1,chr1	-,+	ILDR2,MAEL	-14428,-521
chr16:31020065-31020733	chr16	+	31020205	31020732	True	NM_025193,NM_052874,NM_004604	chr16,chr16,chr16	+,-,+	HSD3B7,STX1B,STX4	-23754,1147,24170
chr17:37894700-37894942	chr17	+	37894709	37894930	True	NM_032339,NM_001030002,NM_005310	chr17,chr17,chr17	-,+,+	C17orf37,GRB7,GRB7	-7921,-170,-573
chr6:64375477-64376743	chr6	+	64375758	64376468	True	NM_015153,NM_016571	chr6,chr6	+,-	PHF3,LGSN	-19385,-345876
chrX:106880808-106881260	chrX	+	106880818	106881101	True	NM_002764,NM_001015881,NM_001204402	chrX,chrX,chrX	+,-,+	PRPS1,TSC22D3,PRPS1	-9227,78667,-9227
chr15:66161069-66161578	chr15	+	66161076	66161626	True	NM_004663,NM_005848	chr15,chr15	+,-	RAB11A,DENND4A	169,-76445
chr12:6558938-6559770	chr12	+	6559087	6559813	True	NM_001242,NM_018009,NR_015382	chr12,chr12,chr12	+,+,-	CD27,TAPBPL,LOC678655	-5095,1363,920
chr5:43547702-43549133	chr5	+	43547801	43549049	True	NM_182789,NM_006451,NM_012343,NM_183323	chr5,chr5,chr5,chr5	-,-,+,-	PAIP1,PAIP1,NNT,PAIP1	8204,8204,53741,8530
chr1:235533859-235534147	chr1	+	235533883	235533991	True	NM_001079515,NM_031371,NM_003193	chr1,chr1,chr1	+,-,+	TBCE,ARID4B,TBCE	-3212,-42351,-3212
chr19:55739573-55739995	chr19	+	55739676	55739986	True	NM_173804,NM_032430	chr19,chr19	-,+	TMEM86B,BRSK1	696,55547
chr3:6902402-6902834	chr3	+	6902443	6902796	True	NM_000844,NR_033378,NM_181874	chr3,chr3,chr3	+,-,+	GRM7,LOC100288428,GRM7	5,1640598,5
chr1:182026176-182026428	chr1	+	182026177	182026477	True	NR_034131,NM_001009992	chr1,chr1	+,-	NCRNA00272,ZNF648	350278,4420
chr11:119056177-119057011	chr11	+	119056325	119056977	True	NM_001168468,NM_024791,NM_001145018,NR_033122	chr11,chr11,chr11,chr11	+,+,-,+	PDZD3,PDZD3,CCDC153,PDZD3	-211,-211,9657,-211
chr13:115047516-115047878	chr13	+	115047672	115047864	True	NM_080687,NM_007368,NM_023011	chr13,chr13,chr13	+,-,+	UPF3A,RASA3,UPF3A	-670,-149577,-670
chr17:19771468-19772687	chr17	+	19771768	19772244	True	NM_152904,NM_014683,NM_001142610	chr17,chr17,chr17	+,-,-	SPECC1,ULK2,ULK2	218090,-529,-529
chr3:46505584-46506107	chr3	+	46505590	46505960	True	NM_002343,NM_001199149,NM_031440	chr3,chr3,chr3	-,-,+	LTF,LTF,RTP3	688,-429,33524
chr2:120279590-120280013	chr2	+	120279916	120280058	True	NM_001029996,NM_002980	chr2,chr2	+,-	PCDP1,SCTR	21966,2020
chr11:66612872-66613344	chr11	+	66612965	66613381	True	NM_001032279,NM_005133,NM_022172	chr11,chr11,chr11	+,+,-	RCE1,RCE1,PC	-2133,-2133,62009
chr20:44638742-44639232	chr20	+	44638803	44639260	True	NM_004994,NM_022095	chr20,chr20	+,-	MMP9,ZNF335	-1307,-37970
chr1:20516500-20517488	chr1	+	20516500	20517526	True	NM_001105572,NM_152376	chr1,chr1	-,+	PLA2G2C,UBXN10	-14813,-3973
chr1:13391410-13392152	chr1	+	13391606	13392184	True	NM_001012276,NM_001098376	chr1,chr1	-,+	PRAMEF8,PRAMEF15	-841,28991
chr1:13391410-13392152	chr1	+	13612391	13612981	False	NM_001012277,NM_001012276,NM_001098376	chr1,chr1,chr1	-,-,+	PRAMEF7,PRAMEF8,PRAMEF15	-1904,-841,28991
chr1:13391410-13392152	chr1	-	12975019	12975608	False	NM_001012277,NM_001012276,NM_001039361	chr1,chr1,chr1	+,+,-	PRAMEF7,PRAMEF8,PRAMEF10	1904,841,-16925
chr15:69238317-69239460	chr15	+	69238348	69238681	True	NR_033671,NM_006305	chr15,chr15	+,-	NOX5,ANP32A	-15548,-125087
chr16:15070565-15071227	chr16	+	15070706	15071092	True	NM_015027,NM_173474	chr16,chr16	+,-	PDXDC1,NTAN1	-1931,78791
chr7:55775970-55776215	chr7	+	55775988	55776067	True	NM_182633,NR_003949	chr7,chr7	+,-	ZNF713,FKBP9L	204263,-3728
chr7:55775970-55776215	chr7	-	33018956	33019017	False	NM_007270,NR_003500	chr7,chr7	+,-	FKBP9,RP9P	-22013,-36174
chrX:69669899-69670142	chrX	+	69669943	69670101	True	NM_020730,NM_016484,NM_021120,NM_001166278	chrX,chrX,chrX,chrX	+,-,+,+	DLG3,PDZD11,DLG3,DLG3	2053,-160145,-5289,4844
chr7:100081612-100081905	chr7	+	100081678	100081946	True	NM_173564,NM_030935	chr7,chr7	+,-	C7orf51,TSC22D4	-179,-4776
chr1:14027173-14027546	chr1	+	14027209	14027501	True	NM_015866,NM_001135610,NM_012231,NM_001010847	chr1,chr1,chr1,chr1	+,+,+,-	PRDM2,PRDM2,PRDM2,LRRC38	3848,-533,3848,-186967
chr19:3803268-3803793	chr19	+	3803274	3803810	True	NM_172251,NM_002378	chr19,chr19	+,-	MRPL54,MATK	-40660,-1464
chrX:47696397-47696601	chrX	+	47696407	47696493	True	NM_007137,NM_001007088	chrX,chrX	+,-	ZNF81,ZNF182	-157,166946
chr4:155254314-155254554	chr4	+	155254395	155254601	True	NM_017639,NM_001184741	chr4,chr4	-,+	DCHS2,FGB	57898,229530
chr1:149261239-149261750	chr1	+	149261241	149261675	True	NM_001024599,NR_027002	chr1,chr1	-,+	HIST2H2BF,LOC388692	137604,17800
chr1:149261239-149261750	chr1	+	149646843	149647277	False	NM_001161334,NR_024510	chr1,chr1	-,+	HIST2H2BF,LOC728855	136701,-70441
chr10:5063716-5065440	chr10	+	5064010	5065336	True	NM_001354,NM_205845,NM_001353	chr10,chr10,chr10	-,-,+	AKR1C2,AKR1C2,AKR1C1	-3803,-3803,-58607
chrX:37526255-37526669	chrX	+	37526393	37526609	True	NM_021083,NM_006520	chrX,chrX	+,-	XK,DYNLT3	18523,180330
chr11:129245964-129246278	chr11	+	129245975	129246323	True	NM_001142685,NM_003658	chr11,chr11	-,+	ARHGAP32,BARX2	-183882,-145
chrX:22046245-22046456	chrX	+	22046245	22046441	True	NM_014332,NM_000444	chrX,chrX	-,+	SMPX,PHEX	-270015,4479
chrX:150154530-150155275	chrX	+	150154636	150155029	True	NM_005342,NM_134446	chrX,chrX	+,-	HMGB3,CD99L2	-2924,-87347
chr6:49710199-49711184	chr6	+	49710618	49711204	True	NM_006061,NM_001145652,NM_001190986	chr6,chr6,chr6	-,+,-	CRISP3,C6orf141,CRISP3	1018,-192573,1000
chr14:105262854-105264135	chr14	+	105262989	105264061	True	NM_005163,NM_001014432,NM_001014431,NM_001137601	chr14,chr14,chr14,chr14	-,-,-,+	AKT1,AKT1,AKT1,ZBTB42	-3051,-909,-909,2871
chr19:1177007-1177524	chr19	+	1177006	1177514	True	NM_000455,NM_014963	chr19,chr19	+,-	STK11,SBNO2	28283,-2724
chr19:58662240-58662593	chr19	+	58662278	58662611	True	NM_024620,NM_133502	chr19,chr19	-,+	ZNF329,ZNF274	-130,31784
chr7:148785816-148786139	chr7	+	148785815	148786051	True	NM_152411,NM_020781	chr7,chr7	-,+	ZNF786,ZNF398	1874,37456
chr17:62219508-62221096	chr17	+	62219559	62220488	True	NR_004380,NM_001433,NR_002995	chr17,chr17,chr17	+,-,+	SNORD104,ERN1,SNORA76	2949,-12057,3210
chr3:12521773-12522326	chr3	+	12521898	12522375	True	NM_001195279,NM_025265,NM_001145393,NM_001145392,NM_001145395,NM_001145394	chr3,chr3,chr3,chr3,chr3,chr3	-,+,+,+,+,+	LOC100129480,TSEN2,TSEN2,TSEN2,TSEN2,TSEN2	64638,3634,3555,3634,3634,3555
chr1:65611439-65612030	chr1	+	65611568	65612079	True	NM_203464,NM_001005353,NM_013410,NR_029516	chr1,chr1,chr1,chr1	+,+,+,-	AK4,AK4,AK4,MIR101-1	1152,1433,1770,-87377
chr3:111467204-111467527	chr3	+	111467207	111467375	True	NM_024508,NM_001134437	chr3,chr3	-,+	ZBED2,PHLDB2	-153041,-15932
chr1:100134998-100135469	chr1	+	100135021	100135371	True	NR_037516,NR_030382	chr1,chr1	+,-	MIR548AA1,MIR548D1	19239,43198
chr8:32466855-32467482	chr8	+	32466862	32467521	True	NM_032664,NM_001160001	chr8,chr8	-,+	FUT10,NRG1	863200,-13569
chr3:12303070-12304073	chr3	+	12303358	12303856	True	NM_003256,NM_005037	chr3,chr3	-,+	TIMP4,PPARG	-102507,25492
chr1:2458883-2459302	chr1	+	2458888	2459270	True	NM_018216,NM_003820,NM_001010926	chr1,chr1,chr1	-,+,-	PANK4,TNFRSF14,HES5	-853,28534,2464
chrX:153636720-153637577	chrX	+	153636726	153637494	True	NM_001009932,NM_001009933,NM_001009934,NM_000116,NM_006730,NM_181313,NM_181312,NM_181311,NR_000011,NR_024048	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,+,-,+,+,+,+,+	DNASE1L1,DNASE1L1,DNASE1L1,TAZ,DNASE1L1,TAZ,TAZ,TAZ,SNORA70,TAZ	2983,2983,2983,2382,131,2382,2382,2382,-8155,2382
chr10:95749454-95750541	chr10	+	95749758	95750587	True	NR_002319,NM_016341	chr10,chr10	-,+	PIPSL,PLCE1	-28086,3158
chr13:114319465-114320448	chr13	+	114319471	114320433	True	NM_000705,NM_002929	chr13,chr13	-,+	ATP4B,GRK1	-6958,1163
chr19:49621248-49621563	chr19	+	49621448	49621520	True	NM_018111,NM_003660,NM_022165	chr19,chr19,chr19	-,+,+	C19orf73,PPFIA3,LIN7B	927,1142,-3881
chr9:85048122-85048429	chr9	+	85048349	85048425	True	NM_152573,NM_001001670	chr9,chr9	-,+	RASEF,FAM75D1	629668,-444713
chr3:105085024-105085538	chr3	+	105085111	105085403	True	NM_170662,NM_001627	chr3,chr3	-,+	CBLB,ALCAM	502534,309
chr19:697471-697742	chr19	+	697471	697587	True	NM_214710,NM_001040134	chr19,chr19	-,+	PRSS57,PALM	-2010,11365
chr1:175043222-175043503	chr1	+	175043292	175043352	True	NR_037606,NM_022093	chr1,chr1	-,+	MRPS14,TNN	-50701,-6349
chr2:34116162-34117767	chr2	+	34116490	34117422	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-377610,-163206
chr2:201205381-201206704	chr2	+	201205396	201206287	True	NM_001100423,NM_152387	chr2,chr2	+,-	SPATS2L,KCTD18	-34091,168568
chr7:6536955-6537308	chr7	+	6536961	6537289	True	NM_006854,NM_001134387	chr7,chr7	-,+	KDELR2,ZDHHC4	-13112,79775
chr5:150947180-150947568	chr5	+	150947189	150947602	True	NM_001447,NM_078483	chr5,chr5	-,+	FAT2,SLC36A1	954,-120077
chr19:11975203-11975754	chr19	+	11975229	11975606	True	NM_152262,NM_001080493	chr19,chr19	+,-	ZNF439,ZNF823	1237,-125469
chr6:150917822-150919206	chr6	+	150918049	150919103	True	NM_001029884,NM_024518	chr6,chr6	+,-	PLEKHG1,ULBP3	1895,-527847
chr16:87423341-87423809	chr16	+	87423364	87423610	True	NM_022818,NM_024735,NR_024568	chr16,chr16,chr16	+,-,-	MAP1LC3B,FBXO31,FBXO31	2190,-5970,2148
chr10:127402887-127404584	chr10	+	127402888	127402950	True	NM_001202438,NM_015608,NR_033847	chr10,chr10,chr10	+,+,-	C10orf137,C10orf137,FLJ37035	5133,5133,5162
chr4:647587-647939	chr4	+	647656	647954	True	NM_007100,NM_001145292	chr4,chr4	-,+	ATP5I,PDE6B	20223,-741
chr17:39403190-39405183	chr17	+	39403203	39405211	True	NM_030975,NM_031963,NM_001146182,NM_033191,NM_033060	chr17,chr17,chr17,chr17,chr17	+,+,-,+,-	KRTAP9-9,KRTAP9-8,KRTAP16-1,KRTAP9-4,KRTAP4-1	6424,-8991,60344,727,-62056
chr1:44680765-44682041	chr1	+	44680806	44681721	True	NM_019100,NM_001034023,NM_001034024,NM_024066	chr1,chr1,chr1,chr1	+,+,+,-	DMAP1,DMAP1,DMAP1,ERI3	-1733,-1733,-1733,139274
chr15:25495265-25496125	chr15	+	25495291	25495859	True	NR_003358,NM_130838,NR_003344,NR_003351,NR_003357,NR_003356,NR_003355,NR_003354,NR_003302,NR_003303,NR_003359	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,-,+,+,+,+,+,+,+,+,+	SNORD115-43,UBE3A,SNORD115-29,SNORD115-36,SNORD115-42,SNORD115-41,SNORD115-40,SNORD115-39,SNORD115-10,SNORD115-11,SNORD115-44	-997,154844,-997,-997,-2850,-4717,-6581,-8449,-2850,-997,146
chr13:114020811-114021357	chr13	+	114021256	114021404	True	NM_024719,NM_005561	chr13,chr13	-,+	GRTP1,LAMP1	-2793,-69838
chr7:131348868-131350330	chr7	+	131348917	131350304	True	NM_005397,NM_013255	chr7,chr7	-,+	PODXL,MKLN1	-107541,-336373
chr5:174152707-174153522	chr5	+	174152789	174153524	True	NM_002449,NM_000794	chr5,chr5	+,-	MSX2,DRD1	-1265,717690
chr15:25451885-25452086	chr15	+	25451891	25452067	True	NR_003315,NR_003314,NR_003313,NR_003312,NR_003311,NR_003310,NR_022010,NR_003495,NR_003308,NR_003309,NM_130838,NR_003342,NR_003307	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,+,-,+,+	SNORD115-23,SNORD115-22,SNORD115-21,SNORD115-20,SNORD115-19,SNORD115-18,PAR4,SNORD115-24,SNORD115-16,SNORD115-17,UBE3A,SNORD115-25,SNORD115-15	4875,2997,-533,-533,-2438,-2438,4771,6738,-7347,-2438,198636,8620,-533
chr11:1967015-1967322	chr11	+	1967134	1967330	True	NR_024471,NM_021134	chr11,chr11	-,+	LOC100133545,MRPL23	43870,1171
chr7:45199785-45200351	chr7	+	45199965	45200391	True	NM_199122,NM_005856	chr7,chr7	-,+	TBRG4,RAMP3	-48648,-2650
chr14:88458691-88459018	chr14	+	88458722	88458848	True	NM_001037525,NM_001201402,NM_001201401,NM_000153,NM_003608	chr14,chr14,chr14,chr14,chr14	-,-,-,-,+	GALC,GALC,GALC,GALC,GPR65	817,1211,817,817,12619
chrX:102860778-102862742	chrX	+	102860818	102862656	True	NM_001142418,NM_032926,NM_001006933	chrX,chrX,chrX	-,+,+	MORF4L2,TCEAL3,TCEAL3	79140,177,177
chr21:46975136-46975393	chr21	+	46975381	46975441	True	NM_130444,NM_194255	chr21,chr21	+,-	COL18A1,SLC19A1	-100008,-12996
chr16:5081891-5082458	chr16	+	5081932	5082310	True	NM_019109,NM_016256	chr16,chr16	+,-	ALG1,NAGPA	39499,1682
chr16:11681601-11681805	chr16	+	11681628	11681846	True	NM_003498,NM_004862,NR_024320,NM_001136472,NM_001136473	chr16,chr16,chr16,chr16,chr16	+,-,-,-,-	SNN,LITAF,LITAF,LITAF,LITAF	80442,-1399,-306,-822,-822
chr10:44064420-44065751	chr10	+	44064544	44065570	True	NM_005674,NM_001099283,NM_001099282,NM_145312,NM_001099284	chr10,chr10,chr10,chr10,chr10	-,-,-,+,-	ZNF239,ZNF239,ZNF239,ZNF485,ZNF239	-637,4546,4545,36284,4546
chr17:43500793-43501574	chr17_ctg5_hap1	+	115924	116344	False	NM_001113738,NM_174919,NM_199282	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	+,-,-	ARL17A,ARHGAP27,ARHGAP27	79376,9113,1842
chr17:43500793-43501574	chr17	+	43500799	43501621	True	NR_024435,NM_174919,NM_199282	chr17,chr17,chr17	+,-,-	LOC100133991,ARHGAP27,ARHGAP27	-161292,8711,1441
chr16:27282012-27283835	chr16	+	27282193	27283649	True	NM_145080,NR_037184	chr16,chr16	-,+	NSMCE1,FLJ21408	-2080,-2726
chrX:20136331-20136750	chrX	+	20136338	20136771	True	NM_152780,NM_001173456,NM_001168465,NM_001168466,NM_001168467	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	MAP7D2,PDHA1,MAP7D2,MAP7D2,MAP7D2	-1224,-774378,-1224,-1224,-1582
chr4:155538640-155539696	chr4	+	155538656	155539716	True	NM_021870,NM_005141,NM_000509	chr4,chr4,chr4	-,+,-	FGG,FGB,FGG	-4754,-54576,-4754
chr17:72982104-72983743	chr17	+	72982115	72983612	True	NM_014603,NM_030630	chr17,chr17	+,-	CDR2L,C17orf28	114,-13215
chrY:23568028-23568292	chrY	+	23568075	23568337	True	NR_001574,NM_001006121	chrY,chrY	-,+	RBMY2EP,RBMY1B	-4627,104886
chr9:34917248-34917635	chr9	+	34917255	34917553	True	NR_024481,NM_015297	chr9,chr9	-,+	C9orf144,KIAA1045	-78672,40638
chr5:176851994-176852729	chr5	+	176852050	176852760	True	NM_001004106,NM_000505,NM_001004105,NM_002082	chr5,chr5,chr5,chr5	+,-,+,+	GRK6,F12,GRK6,GRK6	926,-15473,926,926
chr14:24609657-24610148	chr14	+	24609883	24610143	True	NM_016049,NM_203402,NM_002818,NM_006263,NM_176783,NM_017999	chr14,chr14,chr14,chr14,chr14,chr14	-,+,-,+,+,+	FAM158A,FITM1,PSME2,PSME1,PSME1,RNF31	704,-9260,5762,-4557,-4557,6515
chr1:226002511-226002850	chr1	+	226002510	226002750	True	NM_001136018,NM_014698	chr1,chr1	+,-	EPHX1,TMEM63A	-4764,67720
chrX:139865478-139865902	chrX	+	139865477	139865903	True	NM_004065,NR_028344	chrX,chrX	-,+	CDR1,RP1-177G6.2	870,-73604
chr7:149411276-149411543	chr7	+	149411340	149411480	True	NM_207336,NM_032534	chr7,chr7	-,+	ZNF467,KRBA1	58865,667
chr3:122400142-122400376	chr3	+	122400145	122400368	True	NM_024610,NM_017554	chr3,chr3	-,+	HSPBAP1,PARP14	112333,-524
chr17:26548784-26550300	chr17	+	26548983	26550074	True	NR_003064,NR_028334	chr17,chr17	+,-	PYY2,FLJ40504	3514,84385
chr2:9613920-9614149	chr2	+	9613945	9614092	True	NM_001039613,NM_022334	chr2,chr2	+,-	IAH1,ITGB1BP1	577,-50302
chr3:42701007-42702180	chr3	+	42701156	42702178	True	NM_145166,NR_027753	chr3,chr3	+,-	ZBTB47,HHATL	-6031,40885
chr8:144348589-144348897	chr8	+	144348613	144348719	True	NM_052963,NM_138465	chr8,chr8	-,+	TOP1MT,GLI4	68387,887
chr4:76947794-76948124	chr4	+	76947901	76948066	True	NM_005409,NM_001565,NM_001130017	chr4,chr4,chr4	-,-,+	CXCL11,CXCL10,ART3	9341,-3212,-15615
chr17:62918026-62918435	chr17_ctg5_hap1	+	496182	496239	False	NM_001193465,NM_014834	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	KIAA1267,LRRC37A	67258,-37578
chr17:62918026-62918435	chr17_ctg5_hap1	-	1232317	1232374	False	NR_026901,NR_037772	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LOC644172,CRHR1	-43936,-61864
chr17:62918026-62918435	chr17	+	62918188	62918333	True	NM_199340,NM_001165933	chr17,chr17	-,+	LRRC37A3,RGS9	-3285,215122
chr1:196628774-196630210	chr1	+	196628916	196630075	True	NM_001014975,NM_000186,NM_198503	chr1,chr1,chr1	+,+,-	CFH,CFH,KCNT2	-7969,-7969,-51417
chr10:48440937-48442681	chr10	+	48441125	48442613	True	NM_004962,NM_153034	chr10,chr10	-,+	GDF10,ZNF488	-1987,-86087
chr17:38574621-38574906	chr17	+	38574627	38574772	True	NM_001552,NM_001067	chr17,chr17	+,-	IGFBP4,TOP2A	24903,-425
chr12:102859569-102860968	chr12	+	102859792	102860985	True	NM_001111284,NM_017915	chr12,chr12	-,+	IGF1,C12orf48	11494,-345888
chr14:105552505-105552787	chr14	+	105552542	105552606	True	NM_174891,NM_013345	chr14,chr14	+,-	C14orf79,GPR132	-99977,-20788
chr10:126131612-126132472	chr10	+	126132128	126132476	True	NM_001146340,NM_001167880	chr10,chr10	-,+	NKX1-2,LHPP	6124,17864
chr10:72972750-72973109	chr10	+	72972876	72973072	True	NM_000281,NM_170744	chr10,chr10	-,+	PCBD1,UNC5B	-324335,-629
chr7:127931422-127932099	chr7	+	127931422	127931942	True	NM_000230,NM_001166135	chr7,chr7	+,-	LEP,RBM28	-50142,52070
chr11:63662090-63662315	chr11	+	63662189	63662359	True	NM_017490,NM_173587	chr11,chr11	+,-	MARK2,RCOR2	-6254,22007
chr16:28633967-28634313	chr16	+	28633984	28634098	True	NM_001199142,NM_177536	chr16,chr16	+,-	EIF3C,SULT1A1	65780,818
chr17:39095239-39095934	chr17	+	39095282	39095539	True	NM_015515,NM_001195386	chr17,chr17	-,+	KRT23,TMEM99	-1446,-119909
chr14:96512680-96514180	chr14	+	96512687	96514228	True	NM_018036,NR_023938	chr14,chr14	-,+	ATG2B,C14orf132	315500,-7084
chr6:71664682-71665451	chr6	+	71664732	71665282	True	NM_080742,NM_021940	chr6,chr6	-,+	B3GAT2,SMAP1	1556,-287304
chr2:26384792-26384996	chr2	+	26384870	26385038	True	NM_000182,NM_001168241	chr2,chr2	-,+	HADHA,FAM59B	82606,10921
chr1:161147378-161147580	chr1	+	161147449	161147623	True	NM_001122764,NM_001199874,NM_001199873,NM_003779	chr1,chr1,chr1,chr1	+,-,-,-	PPOX,B4GALT3,B4GALT3,B4GALT3	-11319,185,185,185
chr1:205393463-205394764	chr1	+	205393772	205394624	True	NM_001199051,NM_001199050,NR_037583,NM_001199052,NM_002596,NM_001001552	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,+,-	LEMD1,LEMD1,LEMD1,LEMD1,CDK18,LEMD1	-2558,-2558,-2558,-2558,79059,-2558
chr5:10307901-10308608	chr5	+	10308227	10308302	True	NM_005885,NM_138809	chr5,chr5	+,-	MARCH6,CMBL	45525,-59
chr16:28605346-28606260	chr16	+	28605718	28605778	True	NM_138414,NM_177528,NM_001054	chr16,chr16,chr16	+,-,-	CCDC101,SULT1A2,SULT1A2	-40520,2073,2663
chr9:128529503-128530245	chr9	+	128529503	128530237	True	NM_001006618,NM_001134778	chr9,chr9	-,+	MAPKAP1,PBX3	-59990,-19076
chr16:2254915-2255197	chr16	+	2255111	2255245	True	NM_001199174,NM_001199175,NM_001199173,NM_182563,NM_022372,NM_020764,NM_001042371	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,-,+,-,-	MLST8,MLST8,MLST8,C16orf79,MLST8,CASKIN1,PGP	486,-4,-4,5874,-4,-8646,9627
chr1:82296283-82298121	chr1	+	82296670	82298165	True	NM_012302,NM_024686	chr1,chr1	+,-	LPHN2,TTLL7	-30639,2166718
chr12:48736788-48737411	chr12	+	48736825	48737453	True	NM_001172682,NM_001172681,NM_181788,NM_152320	chr12,chr12,chr12,chr12	-,-,+,-	ZNF641,ZNF641,H1FNT,ZNF641	7626,7271,-14113,7271
chr22:24259042-24260979	chr22	+	24259423	24260930	True	NM_001080843,NM_002415	chr22,chr22	-,+	GSTT2B,MIF	42488,-22910
chr18:61639215-61639895	chr18	+	61639337	61639522	True	NM_198833,NR_027245,NM_002640,NM_001031848	chr18,chr18,chr18,chr18	+,-,+,+	SERPINB8,C18orf20,SERPINB8,SERPINB8	-2125,176799,-2125,-2125
chr16:1400859-1401060	chr16	+	1400885	1401109	True	NM_032520,NM_001001410	chr16,chr16	+,-	GNPTG,C16orf42	790,814
chr7:112127026-112128225	chr7	+	112127150	112128261	True	NM_182597,NM_014705,NM_001134468	chr7,chr7,chr7	+,-,+	C7orf53,DOCK4,C7orf53	-6136,-280688,-6294
chr20:30436694-30437449	chr20	+	30436710	30437206	True	NM_004118,NM_001008409	chr20,chr20	-,+	FOXS1,TTLL9	-3290,21298
chr17:653601-654330	chr17	+	653693	654368	True	NM_015721,NR_024120	chr17,chr17	-,+	GEMIN4,DBIL5P	1183,1531
chr5:179154938-179156474	chr5	+	179154939	179156487	True	NM_014757,NM_001164444	chr5,chr5	+,-	MAML1,CBY3	3363,-46964
chr20:33566661-33567261	chr20	+	33566665	33567263	True	NR_030223,NM_000178	chr20,chr20	+,-	MIR499,GSS	10915,-23064
chr14:53162774-53163896	chr14	+	53162781	53163210	True	NM_002806,NM_014584	chr14,chr14	+,-	PSMC6,ERO1L	10685,-362
chr7:30719225-30720105	chr7	+	30719236	30720129	True	NM_001202483,NM_001202482,NM_001199219,NM_001883	chr7,chr7,chr7,chr7	-,-,+,-	CRHR2,CRHR2,INMT,CRHR2	2062,2062,71621,2062
chr18:60379248-60379699	chr18	+	60379485	60379623	True	NM_194449,NM_176787	chr18,chr18	+,-	PHLPP1,PIGN	3048,-525196
chr18:21978063-21978580	chr18	+	21978123	21978460	True	NM_080597,NM_018439	chr18,chr18	-,+	OSBPL1A,IMPACT	-333,28148
chr4:146019202-146019475	chr4	+	146019206	146019444	True	NM_001040876,NM_002940,NM_014885	chr4,chr4,chr4	+,+,-	ABCE1,ABCE1,ANAPC10	-101,-101,-26
chr17:3513345-3513880	chr17	+	3513384	3513868	True	NM_080704,NM_001031681	chr17,chr17	-,+	TRPV1,CTNS	-679,25893
chr7:149571427-149573387	chr7	+	149571679	149573121	True	NM_001100592,NM_145230,NR_027040	chr7,chr7,chr7	+,+,-	ATP6V0E2,ATP6V0E2,LOC401431	-1674,-1674,-728
chr2:5836099-5836450	chr2	+	5836304	5836394	True	NR_034134,NM_003108	chr2,chr2	-,+	LOC727982,SOX11	-1132492,-3556
chr17:40265810-40266115	chr17	+	40265809	40265929	True	NM_024119,NM_021078,NM_033194	chr17,chr17,chr17	-,-,+	DHX58,KAT2A,HSPB9	-1058,7503,8826
chr11:108420340-108421125	chr11	+	108420372	108421000	True	NM_015065,NM_004398	chr11,chr11	-,+	EXPH5,DDX10	43424,114815
chr2:27543076-27543362	chr2	+	27543122	27543195	True	NM_187841,NM_002437	chr2,chr2	+,-	TRIM54,MPV17	-37883,2833
chr10:127561571-127563512	chr10	+	127561641	127563237	True	NM_018180,NM_145235	chr10,chr10	-,+	DHX32,FANK1	6707,21870
chr14:38678688-38679100	chr14	+	38678813	38679061	True	NM_001049,NM_175060	chr14,chr14	+,-	SSTR1,CLEC14A	-1660,46563
chr19:34397279-34397574	chr19	+	34397344	34397530	True	NM_001166057,NM_024076	chr19,chr19	-,+	PEPD,KCTD15	-384545,-109644
chr17:17579642-17581053	chr17	+	17579655	17580833	True	NM_030665,NM_148172	chr17,chr17	+,-	RAI1,PEMT	3953,-84661
chr2:97652305-97652766	chr2	+	97652311	97652479	True	NM_001122646,NM_001164315	chr2,chr2	-,+	FAM178B,ANKRD36	-10,126753
chr4:119602613-119603360	chr4	+	119602800	119603406	True	NM_014822,NM_020961	chr4,chr4	-,+	SEC24D,METTL14	153970,3167
chr10:121356955-121357443	chr10	+	121357049	121357413	True	NM_001033925,NM_004281,NM_003252	chr10,chr10,chr10	-,+,-	TIAL1,BAG3,TIAL1	-508,53468,-508
chr1:24196034-24196886	chr1	+	24196206	24196512	True	NM_000147,NM_007260	chr1,chr1	-,+	FUCA1,LYPLA2	-1347,-78611
chr18:20514215-20514650	chr18	+	20514216	20514353	True	NM_002894,NM_203291,NM_032933,NM_203292	chr18,chr18,chr18,chr18	+,+,-,+	RBBP8,RBBP8,C18orf45,RBBP8	-972,-428,503631,-428
chr22:46658468-46658753	chr22	+	46658540	46658618	True	NM_006071,NM_017931	chr22,chr22	-,+	PKDREJ,TTC38	651,5242
chr1:86600991-86601674	chr1	+	86601245	86601705	True	NM_152890,NM_006536	chr1,chr1	-,+	COL24A1,CLCA2	20466,288063
chr7:102988574-102989124	chr7	+	102988646	102989055	True	NM_001204453,NM_001129887,NM_002803,NM_014377	chr7,chr7,chr7,chr7	+,-,+,-	PSMC2,DNAJC2,PSMC2,DNAJC2	-733,-3326,-733,-3326
chr3:50302854-50304637	chr3	+	50302908	50304572	True	NM_006764,NM_004636,NM_001005914	chr3,chr3,chr3	-,+,+	IFRD2,SEMA3B,SEMA3B	25504,467,467
chr16:49431544-49432466	chr16	+	49431614	49432452	True	NM_144602,NM_004352	chr16,chr16	+,-	C16orf78,CBLN1	-23869,-115872
chr5:33888142-33889911	chr5	+	33888218	33889558	True	NM_016568,NM_030955	chr5,chr5	+,-	RXFP3,ADAMTS12	46932,2616
chr2:204392445-204394379	chr2	+	204392671	204394045	True	NM_203365,NM_213589,NM_006139	chr2,chr2,chr2	-,-,+	RAPH1,RAPH1,CD28	6071,6071,177152
chr14:105635650-105636198	chr14	+	105635694	105636220	True	NM_033271,NM_145159,NM_002226	chr14,chr14,chr14	+,-,-	BTBD6,JAG2,JAG2	78658,-533,-533
chr12:49489335-49490873	chr12	+	49489447	49490617	True	NM_021044,NM_005430	chr12,chr12	-,+	DHH,WNT1	-845,-117269
chr1:159154466-159155538	chr1	+	159154620	159155581	True	NM_001127173,NR_037870	chr1,chr1	+,-	CADM3,LOC100131825	-13265,16688
chr10:101494116-101494407	chr10	+	101494115	101494388	True	NM_015960,NM_078470,NM_004376	chr10,chr10,chr10	+,-,-	CUTC,COX15,COX15	-2212,-1692,-1692
chr5:170818019-170819033	chr5	+	170818022	170818905	True	NM_002520,NM_199185,NR_037474,NM_001037738	chr5,chr5,chr5,chr5	+,+,-,+	NPM1,NPM1,MIR3912,NPM1	-3369,-3369,-4258,-3369
chr10:51368021-51369967	chr10	+	51368072	51369780	True	NR_029388,NM_003631,NM_002443	chr10,chr10,chr10	-,-,+	LOC728407,PARG,MSMB	1597,1612,179772
chr10:51368021-51369967	chr10	-	51624974	51626682	False	NM_001145262,NM_006327	chr10,chr10	+,-	NCOA4,TIMM23	-48751,-1638
chr14:94577687-94578186	chr14	+	94577748	94578030	True	NM_032036,NM_001130080,NM_005532	chr14,chr14,chr14	-,+,+	IFI27L2,IFI27,IFI27	17977,-720,-720
chrX:123089698-123090328	chrX	+	123089726	123090237	True	NM_001042751,NM_001042750,NM_006603,NM_001081550,NM_001042749	chrX,chrX,chrX,chrX,chrX	+,+,+,-,+	STAG2,STAG2,STAG2,THOC2,STAG2	5318,5318,5318,-222822,4237
chr1:19971305-19971657	chr1	+	19971307	19971517	True	NM_001204085,NM_001204084,NM_181719,NM_005380,NM_182744,NM_001204086	chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,+,+,+	NBL1,NBL1,TMCO4,NBL1,NBL1,NBL1	348,-1150,154943,-551,-1635,742
chr16:31518203-31519176	chr16	+	31518291	31519061	True	NM_022744,NM_016633	chr16,chr16	-,+	C16orf58,AHSP	695,20141
chr4:66484727-66486532	chr4	+	66484893	66486577	True	NR_034138,NM_004439	chr4,chr4	+,-	LOC100144602,EPHA5	49101,49132
chr17:26850644-26851026	chr17	+	26850651	26850999	True	NM_005148,NM_003593	chr17,chr17	-,+	UNC119,FOXN1	28697,-19
chr7:30332030-30333152	chr7	+	30332314	30333190	True	NR_030319,NR_037513,NM_147128	chr7,chr7,chr7	+,-,+	MIR550A1,MIR550B1,ZNRF2	-2955,-2808,-8442
chr7:74652120-74652624	chr7	+	74652126	74652600	True	NR_002206,NM_001003795,NR_003580	chr7,chr7,chr7	-,+,-	GTF2IP1,GTF2IRD2B,LOC100093631	895,-143830,909
chr7:74652120-74652624	chr7	+	99868629	99869019	False	NR_028040,NM_001004351,NR_028039,NR_028038,NM_178831	chr7,chr7,chr7,chr7,chr7	-,+,-,-,-	GATS,SPDYE3,GATS,GATS,GATS	886,36305,886,886,886
chr7:74652120-74652624	chr7	-	72569870	72570348	False	NR_002206,NR_003664,NR_003580	chr7,chr7,chr7	+,-,+	GTF2IP1,SPDYE8P,LOC100093631	-895,-69561,-909
chr7:74652120-74652624	chr7	+	74866467	74866789	False	NM_001145064,NR_003664	chr7,chr7	-,+	GATSL2,SPDYE8P	602,69743
chr7:74652120-74652624	chr7	-	74379635	74380106	False	NM_001025202,NM_001145063	chr7,chr7	-,+	STAG3L2,GATSL1	-72904,-603
chr18:32364110-32364969	chr18	+	32364261	32364888	True	NM_001390,NM_001112734	chr18,chr18	+,-	DTNA,ZSCAN30	-28382,505365
chrX:151884114-151885344	chrX	+	151884174	151884962	True	NM_001129826,NM_004909,NM_005361,NM_175742,NM_001129828,NM_175743,NM_153488,NM_001080848	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,+,+,-,+,+,-	CSAG3,CSAG2,MAGEA2,MAGEA2,CSAG3,MAGEA2,MAGEA2B,CSAG2	-6504,-6427,-1106,-1106,-6427,-1106,421,-6427
chrX:151884114-151885344	chrX	-	151920520	151921308	False	NM_001129826,NM_004909,NM_005361,NM_175742,NM_001129828,NM_175743,NM_153488,NM_001080848	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,-,-,+,-,-,+	CSAG3,CSAG2,MAGEA2,MAGEA2,CSAG3,MAGEA2,MAGEA2B,CSAG2	6502,6425,1106,1106,6425,1106,-421,6425
chr11:116693857-116694325	chr11	+	116693916	116694238	True	NM_000482,NM_000040	chr11,chr11	-,+	APOA4,APOC3	-3,6385
chr10:1094389-1094623	chr10	+	1094392	1094562	True	NM_004508,NM_014023	chr10,chr10	-,+	IDI1,WDR37	549,8213
chr2:47052987-47053769	chr2	+	47052995	47053697	True	NR_034099,NR_024452,NM_001171506	chr2,chr2,chr2	+,+,-	LOC388948,LOC100134259,MCFD2	-9239,1305,89360
chr17:4168423-4168853	chr17	+	4168513	4168729	True	NM_016376,NM_020740,NR_023347	chr17,chr17,chr17	-,-,+	ANKFY1,ANKFY1,CYB5D2	-1239,-1239,-122102
chr6:36512924-36514351	chr6	+	36513443	36514346	True	NM_003017,NM_007271	chr6,chr6	+,-	SRSF3,STK38	47743,958
chr11:75380278-75380511	chr11	+	75380311	75380549	True	NM_033063,NM_025098,NM_207577	chr11,chr11,chr11	-,+,-	MAP6,MOGAT2,MAP6	-832,48384,-832
chr11:67796111-67796540	chr11	+	67796159	67796574	True	NM_030930,NM_006019,NM_002496	chr11,chr11,chr11	-,+,+	UNC93B1,TCIRG1,NDUFS8	-24566,9887,1509
chr12:49507515-49507939	chr12	+	49507758	49507828	True	NM_005430,NM_018113	chr12,chr12	+,-	WNT1,LMBR1L	-135577,-3078
chr16:7380893-7381609	chr16	+	7380914	7381641	True	NM_001146336,NM_145891,NM_145892,NM_145893	chr16,chr16,chr16,chr16	-,+,+,+	TMEM114,RBFOX1,RBFOX1,RBFOX1	1240636,1109,1109,1109
chr2:172779244-172779844	chr2	+	172779262	172779580	True	NR_027862,NM_003705,NM_003642	chr2,chr2,chr2	+,-,+	HAT1,SLC25A12,HAT1	-378,-28449,-378
chr1:44116538-44116792	chr1	+	44116541	44116717	True	NR_033827,NM_014663	chr1,chr1	-,+	LOC100132774,KDM4A	56345,-795
chr19:57922255-57922894	chr19	+	57922345	57922694	True	NM_020633,NM_006959	chr19,chr19	-,+	VN1R1,ZNF17	45463,49
chr15:23157927-23158142	chr16	+	11035703	11035785	False	NM_014015,NM_015226	chr16,chr16	-,+	DEXI,CLEC16A	522,2559
chr15:23157927-23158142	chr15	+	23157966	23158080	True	NR_024074,NR_003521	chr15,chr15	+,-	GOLGA8IP,WHAMML1	97161,50327
chr15:23157927-23158142	chr15	-	29034421	29034535	False	NR_036475,NR_033351,NR_037599	chr15,chr15,chr15	+,-,+	LOC100289656,GOLGA8F,LOC646278	-1083,-256278,444
chr11:3863542-3864119	chr11	+	3863701	3864172	True	NM_001665,NM_003156	chr11,chr11	-,+	RHOG,STIM1	-1488,12760
chr5:18709390-18709868	chr5	+	18709522	18709898	True	NM_001167667,NM_006317	chr5,chr5	-,+	CDH18,BASP1	1278505,-1491825
chr8:49648256-49648893	chr8	+	49648268	49648929	True	NM_001007176,NR_024605,NM_024593,NM_001142857	chr8,chr8,chr8,chr8	+,-,-,-	C8orf22,EFCAB1,EFCAB1,EFCAB1	335973,-398,-398,-398
chr3:52804316-52804604	chr3	+	52804337	52804581	True	NM_003157,NM_001193533,NM_001166435,NM_001166434,NM_001166436,NM_002215	chr3,chr3,chr3,chr3,chr3,chr3	-,-,+,+,+,+	NEK4,NEK4,ITIH1,ITIH1,ITIH1,ITIH1	434,434,9355,7941,9355,7026
chr10:93665546-93666993	chr10	+	93665830	93666976	True	NM_003972,NM_152429	chr10,chr10	+,-	BTAF1,FGFBP3	16759,2334
chr1:3564103-3565707	chr1	+	3564572	3565744	True	NM_001204188,NM_001204184,NM_001204185,NM_001204186,NM_001204187,NM_005427,NM_017818	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,+,-	TP73,TP73,TP73,TP73,TP73,TP73,WDR8	3384,3384,3384,3384,3384,3384,977
chr16:30908532-30909030	chr16	+	30908552	30908962	True	NM_001330,NM_004765,NR_031576,NM_001142544	chr16,chr16,chr16,chr16	+,-,+,+	CTF1,BCL7C,MIR762,CTF1	-675,-3153,-3379,-675
chr16:75595855-75597524	chr16	+	75596403	75597195	True	NM_001077418,NM_001077419,NM_001077416,NM_007285	chr16,chr16,chr16,chr16	-,-,-,+	TMEM231,TMEM231,TMEM231,GABARAPL2	-6233,-6233,-6267,3053
chr9:139247783-139248176	chr9	+	139247830	139248176	True	NM_001200003,NM_001145639,NM_001080849	chr9,chr9,chr9	+,+,-	GPSM1,GPSM1,DNLZ	1075,-372,10115
chr5:79866207-79866523	chr5	+	79866235	79866414	True	NM_205548,NM_001004441	chr5,chr5	+,-	FAM151B,ANKRD34B	-82486,-48
chr3:140771024-140771409	chr3	+	140771084	140771380	True	NM_001178140,NM_080862	chr3,chr3	-,+	TFDP2,SPSB4	947899,-392
chr22:39052891-39054774	chr22	+	39052975	39054103	True	NM_001002880,NM_001013647,NM_015373	chr22,chr22,chr22	+,-,+	CBY1,LOC646851,CBY1	-368,-341,-368
chr14:75895221-75895451	chr14	+	75895396	75895500	True	NM_130469,NM_001135048,NM_001135049,NM_007176,NM_001135047	chr14,chr14,chr14,chr14,chr14	+,+,+,-,+	JDP2,JDP2,JDP2,C14orf1,JDP2	-387,-527,3336,232088,-938
chr10:123738371-123738844	chr10	+	123738434	123738850	True	NM_206861,NM_017615,NM_001167865,NM_206862	chr10,chr10,chr10,chr10	+,-,-,+	TACC2,NSMCE4A,NSMCE4A,TACC2	9838,-3691,-3691,9838
chr12:112858961-112859554	chr12	+	112859009	112859238	True	NM_002834,NM_001024662	chr12,chr12	+,-	PTPN11,RPL6	-2533,-11566
chr17:78076879-78077307	chr17	+	78076886	78077326	True	NM_001079804,NM_001079803,NM_014740,NM_000152	chr17,chr17,chr17,chr17	+,+,-,+	GAA,GAA,EIF4A3,GAA	-1582,-1582,43706,-1582
chr7:128823919-128824444	chr7	+	128824247	128824421	True	NM_005631,NR_034053	chr7,chr7	+,-	SMO,TNPO3	4291,-129020
chr19:19887599-19887835	chr19	+	19887690	19887838	True	NM_021047,NR_026956	chr19,chr19	+,-	ZNF253,LOC284440	88875,-468
chr2:204572512-204573767	chr2	+	204572564	204573382	True	NM_006139,NM_203365	chr2,chr2	+,-	CD28,RAPH1	-1423,-172506
chr12:48215582-48216653	chr12	+	48215623	48216595	True	NM_015401,NM_017842,NM_001098416	chr12,chr12,chr12	-,+,-	HDAC7,SLC48A1,HDAC7	-1860,-48707,-1860
chr21:45209798-45210164	chr21	+	45209822	45210082	True	NM_000100,NM_003683	chr21,chr21	-,+	CSTB,RRP1	-13563,-455
chr3:127390705-127391063	chr3	+	127390735	127390998	True	NR_033428,NR_033429,NM_172027,NM_001142646	chr3,chr3,chr3,chr3	+,+,+,-	ABTB1,ABTB1,ABTB1,TPRA1	782,782,782,-81167
chrX:70150288-70150690	chrX	+	70150334	70150500	True	NM_001048164,NM_032803,NM_001170931	chrX,chrX,chrX	-,-,+	SLC7A3,SLC7A3,FOXO4	525,525,165498
chr7:158498116-158499767	chr7	+	158498314	158499540	True	NM_017760,NM_018051	chr7,chr7	-,+	NCAPG2,WDR60	-794,149728
chr17:42144066-42144522	chr17	+	42144145	42144393	True	NR_028581,NR_028582,NM_138387,NM_152344	chr17,chr17,chr17,chr17	+,+,+,-	G6PC3,G6PC3,G6PC3,LSM12	3704,3704,3704,644
chr12:53612634-53613124	chr12	+	53612741	53613143	True	NM_001170790,NM_001042728	chr12,chr12	+,-	MFSD5,RARG	32226,1057
chr2:114431670-114433670	chr2	+	114431941	114433015	True	NR_024531,NM_013412	chr2,chr2	-,+	RPL23AP7,RABL2A	-47226,-47175
chr14:23442768-23443285	chr14	+	23442831	23443321	True	NM_001099780,NM_198086,NM_032876	chr14,chr14,chr14	+,-,-	PSMB11,JUB,JUB	68054,3161,8577
chr4:75720272-75721005	chr4	+	75720487	75721045	True	NM_001729,NM_015393	chr4,chr4	-,+	BTC,PARM1	-605,137239
chr16:71555233-71557104	chr16	+	71555274	71557126	True	NM_001166395,NM_005769,NM_006961	chr16,chr16,chr16	+,+,-	CHST4,CHST4,ZNF19	3027,2896,-32020
chr1:36769488-36770205	chr1	+	36769551	36770249	True	NM_024676,NM_001162530,NM_018166	chr1,chr1,chr1	+,+,-	SH3D21,SH3D21,FAM176B	2458,1744,19556
chr11:62445861-62446144	chr11	+	62445861	62446181	True	NM_015853,NM_001085372,NM_024099	chr11,chr11,chr11	-,+,-	UBXN1,C11orf83,C11orf48	396,-6787,-6620
chr13:37246100-37246880	chr13	+	37246372	37246904	True	NM_001127217,NM_203451	chr13,chr13	-,+	SMAD9,C13orf36	247555,1144
chr16:33943541-33943741	chr16	+	33943580	33943786	True	NR_027080,NR_002837	chr16,chr16	+,-	LOC283914,UBE2MP1	654000,461026
chr14:75419374-75419817	chr14	+	75419383	75419643	True	NM_014239,NM_002632	chr14,chr14	+,-	EIF2B2,PGF	49968,2698
chr6:126069819-126070512	chr6	+	126069925	126070137	True	NM_016063,NM_012259	chr6,chr6	-,+	HDDC2,HEY2	-446643,594
chr13:28194982-28195195	chr13	+	28195060	28195206	True	NM_015972,NM_153371,NM_152705	chr13,chr13,chr13	+,-,+	POLR1D,LNX2,POLR1D	822,-340,796
chrX:103809764-103810413	chrX	+	103809818	103810452	True	NM_153448,NM_017416	chrX,chrX	-,+	ESX1,IL1RAPL2	-310219,543
chr9:89699355-89699783	chr9	+	89699378	89699804	True	NR_036691,NM_001001709	chr9,chr9	-,+	LOC494127,C9orf170	386,63754
chr1:161688657-161690207	chr1	+	161688715	161690231	True	NM_001002901,NR_002595	chr1,chr1	+,-	FCRLB,RPL31P11	2225,-33673
chr9:77706160-77707162	chr9	+	77706297	77707119	True	NM_012383,NM_017881,NR_023352,NM_001127603	chr9,chr9,chr9,chr9	+,-,-,-	OSTF1,C9orf95,C9orf95,C9orf95	-2951,-3164,-3164,-3164
chr17:45901578-45902302	chr17	+	45901601	45902108	True	NM_145798,NM_033413,NM_145255,NR_037575,NM_148887	chr17,chr17,chr17,chr17,chr17	-,+,-,-,-	OSBPL7,LRRC46,MRPL10,MRPL10,MRPL10	-2454,6884,6850,6850,6850
chr3:128713531-128713919	chr3	+	128713542	128713968	True	NM_020741,NM_024768	chr3,chr3	-,+	KIAA1257,CCDC48	-556,6503
chrX:118279533-118281118	chrX	+	118279588	118281128	True	NM_006667,NM_020721	chrX,chrX	+,-	PGRMC1,KIAA1210	89082,3464
chr8:21901808-21902581	chr8	+	21901869	21902574	True	NM_001114136,NM_001114137,NM_024815,NM_001114139,NM_003867	chr8,chr8,chr8,chr8,chr8	+,+,-,+,+	EPB49,EPB49,NUDT18,EPB49,FGF17	9753,8506,64408,9753,-1492
chr10:11624054-11625278	chr10	+	11624527	11625132	True	NM_014688,NM_024693	chr10,chr10	-,+	USP6NL,ECHDC3	28606,159223
chr21:44393608-44393951	chr21	+	44393649	44393949	True	NM_004571,NM_018669	chr21,chr21	+,-	PKNOX1,WDR4	693,-93971
chr19:290259-290468	chr19	+	290267	290503	True	NM_177543,NM_003712,NM_001005240,NM_177526	chr19,chr19,chr19,chr19	-,-,+,-	PPAP2C,PPAP2C,OR4F17,PPAP2C	716,982,-179639,982
chr7:63582784-63583652	chr7	+	63583419	63583659	True	NM_178558,NM_001159522	chr7,chr7	-,+	ZNF680,ZNF727	439896,-77658
chr8:53477422-53477633	chr8	+	53477433	53477495	True	NM_207413,NM_005285	chr8,chr8	-,+	FAM150A,NPBWR1	576,374972
chr14:74113990-74114654	chr14	+	74114274	74114678	True	NM_031427,NM_001201366,NM_006029	chr14,chr14,chr14	+,+,-	DNAL1,DNAL1,PNMA1	-2747,-2747,66500
chr19:12274244-12275348	chr19	+	12274310	12274988	True	NM_003437,NR_037801,NR_037802,NM_145233	chr19,chr19,chr19,chr19	+,-,-,-	ZNF136,ZNF625,ZNF625-ZNF20,ZNF625	-489,-6764,-6764,-6764
chr8:72756708-72757395	chr8	+	72756850	72757385	True	NR_033652,NR_033651,NM_005098	chr8,chr8,chr8	+,+,-	LOC100132891,LOC100132891,MSC	-1543,-550,-119
chr14:105265907-105266141	chr14	+	105265907	105266187	True	NM_005163,NM_001137601,NM_001014431,NM_001014432	chr14,chr14,chr14,chr14	-,+,-,-	AKT1,ZBTB42,AKT1,AKT1	-5969,745,-3827,-3827
chr16:55689215-55689556	chr16	+	55689228	55689546	True	NM_001025194,NM_001172501,NM_001043,NM_001172504	chr16,chr16,chr16,chr16	-,+,+,+	CES1,SLC6A2,SLC6A2,SLC6A2	177579,-5,805,1009
chr6:3228832-3229456	chr6	+	3228856	3229375	True	NM_001135750,NM_178012	chr6,chr6	+,-	PSMG4,TUBB2B	29786,-888
chr10:62758820-62760610	chr10	+	62758944	62760520	True	NM_033379,NR_024554,NR_024555	chr10,chr10,chr10	+,-,-	CDK1,RHOBTB1,RHOBTB1	-220791,276,738
chr16:20493379-20494261	chr16	+	20493583	20494183	True	NM_174924,NM_001010845	chr16,chr16	-,+	PDILT,ACSM2A	-77550,-30775
chr10:74385647-74386743	chr10	+	74385726	74386362	True	NM_138357,NM_006077,NM_001195518	chr10,chr10,chr10	+,-,-	CCDC109A,CBARA1,CBARA1	65526,-173,-173
chr13:111971330-111971546	chr13	+	111971399	111971561	True	NM_152324,NM_017664	chr13,chr13	+,-	C13orf16,ANKRD10	1453,-403983
chr21:40749653-40751101	chr21	+	40749720	40750978	True	NM_004627,NM_004965,NM_001146218	chr21,chr21,chr21	+,-,+	WRB,HMGN1,WRB	1234,-28673,8713
chr20:47803337-47804200	chr20	+	47803336	47804069	True	NM_017454,NM_017895,NM_017452,NM_017453,NM_004602,NM_001037328	chr20,chr20,chr20,chr20,chr20,chr20	-,+,-,-,-,-	STAU1,DDX27,STAU1,STAU1,STAU1,STAU1	886,31762,886,886,886,886
chr10:95043327-95043932	chr10	+	95043374	95043908	True	NM_013451,NM_000783	chr10,chr10	-,+	MYOF,CYP26A1	198216,-209778
chr21:45345317-45345809	chr21	+	45345368	45345784	True	NR_026961,NM_001037553	chr21,chr21	-,+	LOC284837,AGPAT3	-112920,-140
chr13:114105412-114105977	chr13	+	114105712	114105844	True	NM_017905,NM_138430,NM_199162	chr13,chr13,chr13	+,-,-	TMCO3,ADPRHL1,ADPRHL1	39463,2045,-2255
chr2:131849639-131850471	chr2	+	131849783	131850463	True	NM_001100623,NM_001009993	chr2,chr2	+,-	PLEKHB2,FAM168B	11956,598
chr19:44007950-44008171	chr19	+	44007958	44008196	True	NM_198850,NM_174945	chr19,chr19	-,+	PHLDB3,ZNF575	839,29143
chr18:14965291-14965719	chr18	+	14965301	14965667	True	NR_027417,NR_036153	chr18,chr18	-,+	LOC644669,MIR3156-2	360301,-135187
chr1:42847379-42847947	chr1	+	42847439	42847967	True	NM_001198850,NM_173642	chr1,chr1	-,+	FOXJ3,RIMKLA	-45891,-1027
chr17:74070989-74071870	chr17	+	74071138	74071904	True	NM_180990,NM_014230,NM_003857	chr17,chr17,chr17	+,-,+	ZACN,SRP68,GALR2	3358,-2531,-297
chr2:33056864-33057634	chr2	+	33056869	33057627	True	NM_021209,NR_027098	chr2,chr2	-,+	NLRC4,LOC285045	-566057,-6411
chr17:7534676-7534935	chr17	+	7534705	7534977	True	NM_001040,NM_133491,NM_001146279,NM_001146280,NM_001146281,NR_027462	chr17,chr17,chr17,chr17,chr17,chr17	+,-,+,+,+,+	SHBG,SAT2,SHBG,SHBG,SHBG,SHBG	-1303,-3511,-1303,-1303,-1303,-3469
chr10:104677691-104678037	chr10	+	104677775	104678049	True	NM_199077,NM_017649,NM_000102,NM_199076	chr10,chr10,chr10,chr10	+,+,-,+	CNNM2,CNNM2,CYP17A1,CNNM2	64,64,-80485,64
chr17:4984661-4984987	chr17	+	4984707	4984851	True	NM_014519,NM_153018	chr17,chr17	-,+	ZNF232,ZFP3	41596,-3013
chr1:52499101-52499385	chr1	+	52499152	52499420	True	NM_001136497,NM_138417	chr1,chr1	+,-	BTF3L4,KTI12	22436,102
chr5:76526563-76527457	chr5	+	76526571	76527467	True	NM_003719,NM_032367	chr5,chr5	+,-	PDE8B,ZBED3	-19929,-143541
chr8:126011617-126012726	chr8	+	126011633	126012622	True	NM_003129,NM_014846	chr8,chr8	+,-	SQLE,KIAA0196	-964,91489
chr8:66754966-66755429	chr8	+	66755091	66755480	True	NM_001145838,NM_002604	chr8,chr8	+,-	MTFR1,PDE7A	-173040,-1336
chr20:385723-387440	chr20	+	385845	387487	True	NM_144628,NM_031229,NM_006462	chr20,chr20,chr20	-,+,+	TBC1D20,RBCK1,RBCK1	55756,1221,1221
chr3:48935646-48936081	chr3	+	48935687	48935893	True	NM_006321,NM_000387	chr3,chr3	+,-	ARIH2,SLC25A20	20387,583
chr5:157285793-157286030	chr5	+	157285925	157285985	True	NM_014666,NM_173491,NM_001195555,NM_001195556	chr5,chr5,chr5,chr5	-,+,-,-	CLINT1,LSM11,CLINT1,CLINT1	248,-115221,248,248
chr2:158978500-158978930	chr2	+	158978624	158978980	True	NM_001111067,NM_173355	chr2,chr2	-,+	ACVR1,UPP2	-246250,-20300
chr1:10004283-10005011	chr1	+	10004486	10004981	True	NM_032368,NM_022787	chr1,chr1	-,+	LZIC,NMNAT1	-1660,-1058
chr22:29599159-29599756	chr22	+	29599242	29599799	True	NM_012265,NM_133455	chr22,chr22	-,+	RHBDD3,EMID1	64165,2153
chr4:80994364-80994780	chr4	+	80994438	80994659	True	NM_020226,NM_001145794,NM_058172	chr4,chr4,chr4	+,-,-	PRDM8,ANTXR2,ANTXR2	111764,29,29
chr1:85514535-85515351	chr1	+	85514585	85515361	True	NM_145172,NM_018298	chr1,chr1	+,-	WDR63,MCOLN3	12631,-416
chr6:36926451-36926826	chr6	+	36926516	36926838	True	NM_014341,NM_153370	chr6,chr6	-,+	MTCH1,PI16	27161,-4358
chr8:145028950-145029152	chr8	+	145029116	145029188	True	NM_201379,NM_201380,NM_000837,NR_030383	chr8,chr8,chr8,chr8	-,-,+,-	PLEC,PLEC,GRINA,MIR661	-1028,-4072,35037,-9669
chr10:5530351-5530589	chr10	+	5530409	5530637	True	NM_017422,NM_005185	chr10,chr10	-,+	CALML5,CALML3	10946,36286
chr8:53627206-53627467	chr8	+	53627217	53627433	True	NM_014781,NM_001083617,NM_005285	chr8,chr8,chr8	-,-,+	RB1CC1,RB1CC1,NPBWR1	-191,-191,225034
chr2:11680018-11681040	chr2	+	11680198	11680956	True	NR_003095,NM_148903,NM_033090,NM_014668	chr2,chr2,chr2,chr2	-,+,+,+	E2F6,GREB1,GREB1,GREB1	-73901,-170,1894,-6008
chr8:37404551-37405102	chr8	+	37404655	37405097	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	148203,200517
chr4:56413433-56415188	chr4	+	56413480	56414727	True	NM_004898,NM_018475	chr4,chr4	-,+	CLOCK,TMEM165	-483,-151441
chr17:61774202-61774463	chr17	+	61774212	61774452	True	NM_203351,NM_030576	chr17,chr17	+,-	MAP3K3,LIMD2	-74462,3117
chr3:135102631-135103379	chr3	+	135102660	135103406	True	NM_178554,NM_001190447	chr3,chr3	-,+	KY,PPP2R3A	-732796,581108
chr1:196578705-196580292	chr1	+	196578733	196580098	True	NM_198503,NM_001014975	chr1,chr1	-,+	KCNT2,CFH	-1234,40909
chr3:196042665-196044477	chr3	+	196042912	196044469	True	NM_152672,NM_152773	chr3,chr3	+,-	OSTalpha,TCTEX1D2	-99590,746
chr6:31079696-31080054	chr6_mcf_hap5	+	2461903	2461977	False	NM_014068,NM_001264,NM_014070	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	+,-,-	PSORS1C1,CDSN,C6orf15	2555,8246,330
chr6:31079696-31080054	chr6_dbb_hap3	+	2377150	2377224	False	NM_014068,NM_001264,NM_014070	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	+,-,-	PSORS1C1,CDSN,C6orf15	2555,8246,330
chr6:31079696-31080054	chr6_mann_hap4	+	2428324	2428398	False	NM_014068,NM_001264,NM_014070	chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4	+,-,-	PSORS1C1,CDSN,C6orf15	2566,8257,330
chr6:31079696-31080054	chr6	+	31079978	31080052	True	NM_014068,NM_001264,NM_014070	chr6,chr6,chr6	+,-,-	PSORS1C1,CDSN,C6orf15	2555,8250,330
chr2:239136403-239137868	chr2	+	239136888	239137745	True	NR_026925,NR_026926,NR_026923	chr2,chr2,chr2	-,-,+	LOC151174,LOC151174,LOC643387	2623,2623,2581
chrX:48113128-48114320	chrX	+	48113348	48114359	True	NM_175723,NM_005635	chrX,chrX	-,+	SSX5,SSX1	-57149,437
chr4:8162817-8163280	chr4	+	8163100	8163168	True	NM_001130083,NM_001130087,NM_001130086,NM_001130085,NM_001130084,NM_001130088,NM_032432,NM_018986	chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4	-,-,-,-,-,-,-,+	ABLIM2,ABLIM2,ABLIM2,ABLIM2,ABLIM2,ABLIM2,ABLIM2,SH3TC1	-2541,-2541,-2541,-2541,-2541,-2541,-2541,37891
chrX:10804922-10805755	chrX	+	10805109	10805448	True	NM_001122608,NM_033290	chrX,chrX	+,-	HCCS,MID1	323957,46414
chr5:43397326-43398465	chr5	+	43397381	43398311	True	NM_153361,NM_012343,NM_148672	chr5,chr5,chr5	+,+,-	MGC42105,NNT,CCL28	-205109,204479,14230
chr1:33206198-33207189	chr1	+	33206391	33206933	True	NM_020888,NM_030786	chr1,chr1	+,-	KIAA1522,SYNC	578,-38030
chr10:52632444-52633782	chr10	+	52632448	52633498	True	NM_001098512,NM_001198818	chr10,chr10	+,-	PRKG1,A1CF	117446,11995
chr6:117003462-117004117	chr6	+	117003602	117004144	True	NM_145062,NM_002269	chr6,chr6	-,+	ZUFSP,KPNA5	-13629,-1293
chr16:75588725-75589413	chr16	+	75588872	75589376	True	NM_001077418,NM_001077419,NM_001077416,NM_007285	chr16,chr16,chr16,chr16	-,-,-,+	TMEM231,TMEM231,TMEM231,GABARAPL2	844,844,810,10872
chr1:222792053-222792370	chr1	+	222792147	222792371	True	NM_198551,NM_005681	chr1,chr1	+,-	MIA3,TAF1A	-754,-28872
chr10:49482504-49483421	chr10	+	49482506	49483360	True	NM_001018071,NM_002750	chr10,chr10	-,+	FRMPD2,MAPK8	-11,126326
chrY:4869743-4870251	chrY	+	4869749	4870242	True	NM_032971,NR_001540	chrY,chrY	+,-	PCDH11Y,TTTY23	-1533,1241459
chr7:57081778-57083189	chr7	+	57081780	57083227	True	NR_036270,NR_036102	chr7,chr7	-,+	MIR4283-2,MIR3147	-58209,389503
chr7:57081778-57083189	chr7	-	63021730	63023177	False	NR_028349,NR_036246	chr7,chr7	-,+	LOC100287834,MIR4283-1	-162311,58290
chr6:16127886-16128343	chr6	+	16127984	16128360	True	NM_013262,NR_036448	chr6,chr6	+,-	MYLIP,DTNBP1	956,-464695
chr5:159827665-159828296	chr5	+	159827732	159828142	True	NM_022090,NM_004219	chr5,chr5	-,+	C5orf54,PTTG1	-672,20722
chr1:183447458-183447870	chr1	+	183447513	183447855	True	NM_201569,NM_201568,NM_173156,NM_001174061,NM_015039	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	SMG7,SMG7,SMG7,SMG7,NMNAT2	-6068,-6068,-6068,-6068,-59879
chr15:40636180-40636796	chr15	+	40636469	40636763	True	NM_001145643,NM_207380	chr15,chr15	+,-	PHGR1,C15orf52	6470,-3301
chr19:17858776-17859032	chr19	+	17858845	17859069	True	NM_001161359,NM_001161358,NM_001080421,NM_015122,NM_001161357	chr19,chr19,chr19,chr19,chr19	+,+,-,+,+	FCHO1,FCHO1,UNC13A,FCHO1,FCHO1	3216,-369,-59837,3216,-369
chr21:32413603-32413890	chr21	+	32413605	32413937	True	NM_001128077,NM_001099219	chr21,chr21	+,-	KRTAP20-3,KRTAP19-8	-398473,-2810
chr12:53205482-53207440	chr12	+	53205736	53207452	True	NM_199187,NM_002272	chr12,chr12	+,-	KRT18,KRT4	135202,933
chr3:10289470-10289878	chr3	+	10289647	10289866	True	NM_001134941,NM_014760	chr3,chr3	-,+	GHRL,TATDN2	42603,310
chr3:33139481-33139761	chr3	+	33139480	33139571	True	NM_001039770,NM_001136238,NM_006371,NM_000404,NM_001079811,NM_001135602	chr3,chr3,chr3,chr3,chr3,chr3	-,-,+,-,-,-	TMPPE,TMPPE,CRTAP,GLB1,GLB1,GLB1	-1187,-1187,15878,-786,-1166,-786
chr1:37499092-37499391	chr1	+	37499102	37499342	True	NR_036217,NM_000831	chr1,chr1	+,-	MIR4255,GRIK3	127821,552
chr15:44579228-44580021	chr15	+	44579233	44580067	True	NM_032892,NM_177974,NM_138423	chr15,chr15,chr15	-,+,+	FRMD5,CASC4,CASC4	-91804,841,841
chr17:48422585-48423087	chr17	+	48422677	48422961	True	NM_016504,NM_022167	chr17,chr17	-,+	MRPL27,XYLT2	27651,431
chr1:8090008-8090571	chr1	+	8090145	8090278	True	NM_007262,NM_018948	chr1,chr1	+,-	PARK7,ERRFI1	-68489,-3752
chr9:35095205-35095658	chr9	+	35095316	35095690	True	NM_032634,NM_203299,NM_152850,NM_013442,NM_001201484	chr9,chr9,chr9,chr9,chr9	-,+,-,-,-	PIGO,C9orf131,PIGO,STOML2,PIGO	906,-53144,958,7514,906
chr3:36778799-36779070	chr3	+	36778804	36779114	True	NM_000249,NM_033403	chr3,chr3	+,-	MLH1,DCLK3	255726,2288
chr7:6681862-6682325	chr7	+	6681868	6682010	True	NM_017560,NM_006956	chr7,chr7	+,-	ZNF853,ZNF12	-26392,64606
chr5:43193033-43193249	chr5	+	43193126	43193284	True	NM_153361,NM_001098272	chr5,chr5	+,-	MGC42105,HMGCS1	-850,120361
chr13:19755659-19756020	chr13	+	19755698	19756064	True	NM_006001,NR_034026	chr13,chr13	-,+	TUBA3C,LOC100287114	-22,163124
chr9:34376806-34377133	chr9	+	34376947	34377007	True	NM_147168,NM_147169,NM_020702,NM_147173	chr9,chr9,chr9,chr9	-,-,-,+	C9orf24,C9orf24,KIAA1161,NUDT2	4641,4641,-53,-47494
chr1:17044846-17045266	chr1	+	17044863	17045237	True	NR_026567,NR_037446	chr1,chr1	-,+	ESPNP,MIR3675	1465,-37164
chr1:212741006-212742214	chr1	+	212741151	212742252	True	NM_001030287,NM_018664	chr1,chr1	+,-	ATF3,BATF3	-2505,131126
chr9:134614586-134614792	chr9	+	134614685	134614747	True	NM_007171,NM_005312	chr9,chr9	+,-	POMT1,RAPGEF1	-236447,-1760
chr1:224804423-224804663	chr1	+	224804503	224804657	True	NM_152495,NM_025160	chr1,chr1	+,-	CNIH3,WDR26	-375,-182502
chr21:32999691-33001246	chr21	+	32999780	33000786	True	NM_000454,NM_003253	chr21,chr21	+,-	SOD1,TIAM1	31148,-68490
chr1:77748601-77748803	chr1	+	77748620	77748818	True	NM_174858,NM_012093,NM_005482	chr1,chr1,chr1	+,+,-	AK5,AK5,PIGK	-1009,-384,-63488
chr2:98261979-98262487	chr2	+	98261998	98262310	True	NM_001862,NM_005735	chr2,chr2	+,-	COX5B,ACTR1B	210,18301
chr17:5095809-5096680	chr17	+	5095859	5096257	True	NM_032530,NR_034082	chr17,chr17	-,+	ZNF594,LOC100130950	-681,-531
chr5:132202344-132202811	chr5	+	132202583	132202859	True	NM_014402,NM_052971,NM_005260	chr5,chr5,chr5	+,+,-	UQCRQ,LEAP2,GDF9	-315,6498,-2106
chr5:132165179-132165492	chr5	+	132165238	132165490	True	NM_001172700,NM_175873,NM_133456	chr5,chr5,chr5	-,+,-	SHROOM1,ANKRD43,SHROOM1	1150,-16256,-3236
chr14:76628847-76630318	chr14	+	76628871	76630183	True	NM_017972,NM_003239	chr14,chr14	+,-	C14orf118,TGFB3	-10664,-180779
chr3:49726556-49726761	chr3	+	49726599	49726791	True	NM_022064,NM_020998	chr3,chr3	+,-	RNF123,MST1	198,-403
chr5:141997923-141998545	chr5	+	141997974	141998405	True	NM_001144892,NM_001135608,NM_033137	chr5,chr5,chr5	-,+,-	FGF1,ARHGAP26,FGF1	2553,151886,-4248
chr9:131038651-131039091	chr9	+	131038742	131039018	True	NM_001040011,NM_004486	chr9,chr9	+,-	C9orf119,GOLGA2	-368,-474
chr11:3519515-3520746	chr11	+	3519791	3520699	True	NM_007152,NR_024248	chr11,chr11	-,+	ZNF195,LOC650368	-119343,-117651
chr1:220444623-220445098	chr1	+	220444622	220445109	True	NR_001587,NM_018060,NM_012414	chr1,chr1,chr1	-,+,-	AURKAPS1,IARS2,RAB3GAP2	-3565,-177218,784
chr20:8109642-8111586	chr20	+	8110043	8111626	True	NM_015192,NM_182734,NM_021156	chr20,chr20,chr20	+,+,-	PLCB1,PLCB1,TMX4	1669,1669,-109650
chr10:123924248-123924460	chr10	+	123924247	123924426	True	NM_006997,NM_017615,NM_206860	chr10,chr10,chr10	+,-,+	TACC2,NSMCE4A,TACC2	-1193,-189504,-1193
chr16:3013650-3013857	chr16	+	3013751	3013867	True	NM_172229,NM_152341,NM_004203,NM_024507	chr16,chr16,chr16,chr16	+,+,-,+	KREMEN2,PAQR4,PKMYT1,KREMEN2	349,5474,16723,349
chr6:143380514-143381489	chr6	+	143380806	143381424	True	NM_016108,NM_006734	chr6,chr6	+,-	AIG1,HIVEP2	598,-114468
chr6:112193512-112193909	chr6	+	112193646	112193939	True	NM_002037,NM_003880	chr6,chr6	-,+	FYN,WISP3	738,181338
chr11:12399648-12400632	chr11	+	12399751	12400248	True	NM_018222,NM_013253	chr11,chr11	+,-	PARVA,DKK3	-776,-368834
chr6:111785924-111786374	chr6	+	111786210	111786276	True	NM_002912,NR_034111	chr6,chr6	-,+	REV3L,LOC643749	18190,18398
chr17:40438509-40439763	chr17	+	40438825	40439748	True	NM_012448,NM_003152	chr17,chr17	-,+	STAT5B,STAT5A	-10401,-50
chr1:156212974-156214525	chr1	+	156213088	156214448	True	NM_024897,NM_199173,NM_198406	chr1,chr1,chr1	-,+,-	PAQR6,BGLAP,PAQR6	3445,-1188,3394
chr7:29244299-29245692	chr7	+	29244326	29245560	True	NM_004067,NM_031311	chr7,chr7	+,-	CHN2,CPVL	-10256,-58173
chr7:149570034-149570411	chr7	+	149570047	149570356	True	NM_001100592,NM_145230,NR_027040	chr7,chr7,chr7	+,+,-	ATP6V0E2,ATP6V0E2,LOC401431	-41,-41,646
chr17:79858645-79859745	chr17	+	79858669	79859593	True	NM_016476,NM_005782,NM_001002249,NM_001002248,NM_001002247,NM_001002246,NM_001002245,NM_001002244,NM_002861,NM_148896,NM_001184917,NR_033682,NR_033683,NR_033681,NR_033685	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,-,+,+,+,+,+,+,-,+,-,-,-,-,-	ANAPC11,THOC4,ANAPC11,ANAPC11,ANAPC11,ANAPC11,ANAPC11,ANAPC11,PCYT2,NPB,PCYT2,PCYT2,PCYT2,PCYT2,PCYT2	-9121,-9207,-8902,-9121,-9121,-9121,-9121,-9121,9797,478,9797,9797,9534,9797,9534
chr3:194355799-194356409	chr3	+	194355874	194356322	True	NM_001011655,NM_001166305,NM_153690,NM_138399,NM_001166306	chr3,chr3,chr3,chr3,chr3	-,-,+,-,-	TMEM44,TMEM44,FAM43A,TMEM44,TMEM44	-1724,-1724,50299,-1724,-1724
chr19:11615138-11615807	chr19	+	11615288	11615566	True	NM_138783,NM_001299	chr19,chr19	-,+	ZNF653,CNN1	1224,34012
chr13:102569994-102570438	chr13	+	102570064	102570426	True	NM_004115,NM_004791	chr13,chr13	-,+	FGF14,ITGBL1	-1069,-465149
chr4:113556337-113557913	chr4	+	113556380	113557829	True	NM_018392,NM_015454,NM_016648	chr4,chr4,chr4	-,+,+	C4orf21,LARP7,LARP7	372,782,290
chr17:57184367-57185477	chr17	+	57184452	57185274	True	NM_001005207,NM_015294,NM_018304	chr17,chr17,chr17	-,-,+	TRIM37,TRIM37,PRR11	-186,-186,47585
chr7:32992301-32993435	chr7	+	32992429	32992941	True	NM_007270,NR_003500	chr7,chr7	+,-	FKBP9,RP9P	4063,-9647
chr12:120429220-120430103	chr12	+	120429255	120430109	True	NM_207311,NM_007174	chr12,chr12	+,-	CCDC64,CIT	-1658,-114163
chr4:162979738-162981426	chr4	+	162980465	162981470	True	NM_006174,NM_001128427	chr4,chr4	+,-	NPY5R,FSTL5	1283620,103773
chr12:56125442-56125776	chr12	+	56125470	56125545	True	NM_002905,NM_001780,NM_001040034	chr12,chr12,chr12	+,-,-	RDH5,CD63,CD63	-11377,-2560,-2560
chr4:76815677-76815920	chr4	+	76815676	76815866	True	NM_001130017,NM_006239	chr4,chr4	+,-	ART3,PPEF2	116470,7865
chr13:96205471-96205935	chr13	+	96205634	96205913	True	NM_006984,NM_014934	chr13,chr13	+,-	CLDN10,DZIP1	-739,91094
chr19:41857899-41858476	chr19	+	41858093	41858395	True	NM_001098825,NM_000660	chr19,chr19	+,-	TMEM91,TGFB1	11475,1486
chr5:80495689-80497564	chr5	+	80496145	80497541	True	NR_034121,NR_002754,NR_002755	chr5,chr5,chr5	-,+,+	LOC100131067,RNU5E,RNU5D	99898,3920,3921
chr4:979107-980468	chr4	+	979190	980396	True	NM_022042,NM_000203,NM_134425,NM_213613	chr4,chr4,chr4,chr4	-,+,-,-	SLC26A1,IDUA,SLC26A1,SLC26A1	6837,388,6837,6878
chr3:57678193-57678396	chr3	+	57678193	57678377	True	NM_007159,NM_152678	chr3,chr3	+,-	SLMAP,FAM116A	64796,489
chr16:56642921-56643128	chr16	+	56642938	56643166	True	NR_001447,NM_005953,NM_005950	chr16,chr16,chr16	+,+,-	MT1L,MT2A,MT1G	8206,-512,58861
chr8:135611480-135612855	chr8	+	135611481	135612887	True	NR_002438,NM_001029939	chr8,chr8	+,-	ZFAT-AS1,ZFAT	-1220,95964
chrX:70752915-70753189	chrX	+	70752921	70753125	True	NM_181672,NM_181673,NR_002226	chrX,chrX,chrX	+,+,-	OGT,OGT,INGX	-60,-60,-40317
chr8:7339950-7340394	chr8	+	7339954	7340413	True	NM_080389,NM_001040702,NM_001040703,NM_001040704,NM_152250,NM_152251	chr8,chr8,chr8,chr8,chr8,chr8	-,-,+,-,+,-	DEFB104A,DEFB104B,DEFB105B,DEFB106B,DEFB105A,DEFB106A	-7350,-7350,4829,3547,4829,3547
chr8:7339950-7340394	chr8	-	7686287	7686646	False	NM_080389,NM_001040702,NM_001040703,NM_001040704,NM_152250,NM_152251	chr8,chr8,chr8,chr8,chr8,chr8	+,+,-,+,-,+	DEFB104A,DEFB104B,DEFB105B,DEFB106B,DEFB105A,DEFB106A	7346,7346,-4927,-3645,-4927,-3645
chr11:61684307-61684601	chr11	+	61684363	61684601	True	NM_013401,NM_001139443	chr11,chr11	-,+	RAB3IL1,BEST1	446,32754
chr4:87814661-87815140	chr4	+	87814752	87815018	True	NM_144645,NM_001166693	chr4,chr4	-,+	C4orf36,AFF1	-1177,41135
chr5:139172685-139173067	chr5	+	139172829	139173039	True	NM_032289,NM_001184935	chr5,chr5	+,-	PSD2,NRG2	2366,249895
chr11:17565940-17566221	chr11	+	17566015	17566213	True	NM_153676,NM_002478,NM_005709	chr11,chr11,chr11	-,+,-	USH1C,MYOD1,USH1C	-52,174896,-52
chr14:78081168-78082188	chr14	+	78081442	78082107	True	NM_031210,NM_004863	chr14,chr14	+,-	C14orf156,SPTLC2	92317,1054
chr5:140616430-140616679	chr5	+	140616429	140616552	True	NM_018935,NR_001282,NR_001281,NM_031947	chr5,chr5,chr5,chr5	+,+,+,-	PCDHB15,PCDHB19P,PCDHB18,SLC25A2	8594,3136,-2542,67125
chr11:89537271-89537561	chr11	+	89537447	89537537	True	NM_020358,NR_028346	chr11,chr11	-,+	TRIM49,TRIM53	4256,37627
chr11:89537271-89537561	chr11	-	89768479	89768553	False	NM_001195234,NR_028346	chr11,chr11	+,-	TRIM49L2,TRIM53	-4256,-32803
chr1:3668324-3669108	chr1	+	3668459	3669137	True	NR_033709,NR_033708,NR_033710,NR_033711,NR_033712,NM_152492	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,+	KIAA0495,KIAA0495,KIAA0495,KIAA0495,KIAA0495,CCDC27	-4522,-4522,-4522,-4522,-5124,-11
chr10:11865922-11866908	chr10	+	11866244	11866876	True	NM_014688,NM_153256	chr10,chr10	-,+	USP6NL,C10orf47	-212565,-901
chr16:56456453-56458374	chr16	+	56456703	56458394	True	NM_018233,NM_001144	chr16,chr16	+,-	OGFOD1,AMFR	27029,1100
chr12:88437413-88437972	chr12	+	88437448	88437772	True	NM_152589,NM_001009894	chr12,chr12	-,+	C12orf50,C12orf29	-14272,-8239
chr10:11066613-11068292	chr10	+	11066616	11068311	True	NR_024411,NM_006561	chr10,chr10	-,+	LOC254312,CELF2	-72490,-6774
chr12:81320629-81321031	chr12	+	81320726	81320806	True	NR_030349,NM_024560	chr12,chr12	-,+	MIR618,ACSS3	8860,151002
chr19:51587911-51588139	chr19	+	51587955	51588129	True	NM_022046,NM_014441	chr19,chr19	-,+	KLK14,SIGLEC9	-453,40007
chr18:47013740-47015359	chr18	+	47013901	47015269	True	NM_001199341,NM_001199356,NM_001199343,NM_001199355,NM_001199345,NM_001199344,NM_001199346,NM_001035006,NM_001035005,NR_031720,NM_000985,NM_001199342,NM_001199340,NR_002571,NR_002572,NR_002573,NR_003701	chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18	-,-,-,-,-,-,-,-,-,+,-,-,-,-,-,-,-	RPL17,RPL17-C18ORF32,RPL17,RPL17-C18ORF32,RPL17,RPL17,C18orf32,RPL17,C18orf32,MIR1539,RPL17,RPL17,RPL17,SNORD58A,SNORD58B,U58,SNORD58C	3615,3716,3615,2735,3716,3615,-257,3716,-257,-209,3716,3615,3716,2498,2880,459,475
chr3:122102442-122103005	chr3	+	122102503	122102847	True	NM_014367,NM_001017928	chr3,chr3	+,-	FAM162A,CCDC58	175,-429
chr1:145468578-145470270	chr1	+	145468887	145470275	True	NM_001039888,NM_032305,NM_153713	chr1,chr1,chr1	+,-,+	ANKRD34A,POLR3GL,LIX1L	232,162,6809
chr2:234652811-234653037	chr2	+	234652862	234653093	True	NM_019093,NM_001001394	chr2,chr2	+,-	UGT1A3,DNAJB3	-15141,-201
chr2:234652811-234653037	chr2	+	234664213	234664308	False	NR_037695,NR_037694,NR_037696,NM_000463	chr2,chr2,chr2,chr2	-,-,-,+	LOC100286922,LOC100286922,LOC100286922,UGT1A1	-222,-222,-222,4610
chr8:106330725-106331012	chr8	+	106330967	106331027	True	NM_013437,NM_012082	chr8,chr8	-,+	LRP12,ZFPM2	-729715,119
chr19:16126525-16126822	chr19	+	16126540	16126782	True	NR_026828,NM_021187	chr19,chr19	+,-	LOC126536,CYP4F11	-147,-80864
chr6:139261805-139263275	chr6	+	139261987	139263328	True	NM_001128617,NM_021243	chr6,chr6	-,+	REPS1,C6orf115	46125,86490
chr19:1592791-1593017	chr19	+	1592952	1593062	True	NR_026557,NM_003926	chr19,chr19	+,-	PLK5P,MBD3	-68925,-300
chr12:120030924-120031493	chr12	+	120031111	120031359	True	NR_031589,NM_001136534	chr12,chr12	-,+	MIR1178,TMEM233	120220,-14
chr5:153826721-153827626	chr5	+	153826746	153827420	True	NM_001131062,NM_001131063,NM_024632,NR_024084,NR_037897	chr5,chr5,chr5,chr5,chr5	+,+,+,+,-	SAP30L,SAP30L,SAP30L,SAP30L,FLJ38109	-1280,-1280,-1280,-1280,-1364
chr13:112720166-112720409	chr13	+	112720227	112720388	True	NM_006322,NM_005986	chr13,chr13	-,+	TUBGCP3,SOX1	522150,1524
chr5:102260732-102261837	chr5	+	102260744	102261477	True	NR_033440,NM_017676	chr5,chr5	+,-	PAM,GIN1	-59268,194424
chrX:50556684-50557006	chrX	+	50556763	50556925	True	NM_020717,NR_027121,NR_003933	chrX,chrX,chrX	-,-,+	SHROOM4,SHROOM4,LOC347376	169,169,91506
chr14:65290432-65291694	chr14	+	65290476	65291646	True	NM_001204063,NM_000347,NM_001024858	chr14,chr14,chr14	+,-,-	CHURC1,SPTB,SPTB	89432,-610,-610
chr2:241078457-241078750	chr2	+	241078575	241078795	True	NM_001163424,NM_148961,NM_138336,NM_002081	chr2,chr2,chr2,chr2	-,-,-,+	MYEOV2,OTOS,MYEOV2,GPC1	-2828,1328,-2811,296319
chr4:109520473-109522150	chr4	+	109520565	109521739	True	NR_026968,NM_000995	chr4,chr4	-,+	LOC285456,RPL34	19930,19982
chr6:36949283-36950254	chr6	+	36949347	36950077	True	NM_014341,NM_173558	chr6,chr6	-,+	MTCH1,FGD2	3922,23345
chr8:97274941-97275385	chr8	+	97275007	97275424	True	NM_014754,NM_015942	chr8,chr8	+,-	PTDSS1,MTERFD1	-891,-1211
chr17:26547235-26548719	chr17	+	26547591	26548524	True	NR_003064,NR_028334	chr17,chr17	+,-	PYY2,FLJ40504	5064,85935
chr20:48335390-48336737	chr20	+	48335420	48336518	True	NM_015266,NM_004776	chr20,chr20	+,-	SLC9A8,B4GALT5	92731,-4999
chrX:8766702-8767021	chrX	+	8766747	8766989	True	NM_174951,NM_001001888,NM_001171186	chrX,chrX,chrX	-,+,-	FAM9A,VCX3B,FAM9A	2485,-333927,2439
chr1:173742872-173744040	chr1	+	173743320	173743907	True	NM_018122,NM_001171182	chr1,chr1	+,-	DARS2,CENPL	49889,49419
chr16:1307087-1307403	chr16	+	1307310	1307370	True	NM_024164,NM_012217	chr16,chr16	-,+	TPSB2,TPSD1	-27125,-1088
chr15:81666669-81667435	chr15	+	81666669	81667400	True	NM_001080532,NM_004513	chr15,chr15	-,+	TMC3,IL16	-251,-77466
chrX:153883385-153883829	chrX	+	153883386	153883488	True	NM_172377,NM_020994,NM_139250	chrX,chrX,chrX	-,-,+	CTAG2,CTAG2,CTAG1A	-1533,-1533,-70019
chr22:34318531-34318904	chr22	+	34318533	34318827	True	NM_133642,NM_000362,NM_004737	chr22,chr22,chr22	-,+,-	LARGE,TIMP3,LARGE	-2117,-1121782,-2117
chr18:45565658-45566315	chr18	+	45565716	45566306	True	NM_001142397,NM_001039360	chr18,chr18	+,-	CTIF,ZBTB7C	499120,97424
chr5:130600373-130602130	chr5	+	130600452	130601566	True	NR_024610,NM_001038702,NM_020240	chr5,chr5,chr5	-,+,+	HINT1,CDC42SE2,CDC42SE2	-99418,-801,-801
chr15:31125021-31125549	chr15	+	31125056	31125466	True	NM_017762,NM_001146095	chr15,chr15	-,+	MTMR10,FAN1	158391,70588
chr1:50890910-50891162	chr1	+	50890917	50891101	True	NM_021952,NM_032110	chr1,chr1	+,-	ELAVL4,DMRTA2	-316374,-1776
chr1:1371819-1372385	chr1	+	1372050	1372406	True	NM_199121,NR_026871,NM_022834	chr1,chr1,chr1	+,-,+	VWA1,LOC441869,VWA1	-1198,-15400,-1198
chrX:49128646-49129680	chrX	+	49128909	49129577	True	NM_001114377,NM_033215,NM_001184745,NM_014009	chrX,chrX,chrX,chrX	-,+,+,-	FOXP3,PPP1R3F,PPP1R3F,FOXP3	-7621,-2654,-2654,-7621
chr3:96337791-96338278	chr3	+	96338104	96338305	True	NM_001042533,NM_001080448	chr3,chr3	-,+	MINA,EPHA6	1352970,195119
chr1:154930936-154931519	chr1	+	154931014	154931500	True	NM_001826,NM_020524,NM_138300	chr1,chr1,chr1	+,-,-	CKS1B,PBXIP1,PYGO2	15617,-2447,2808
chr7:148688427-148689170	chr7	+	148688524	148689168	True	NM_004911,NM_020781	chr7,chr7	-,+	PDIA4,ZNF398	36664,134339
chr6:151812762-151814140	chr6	+	151813178	151813976	True	NM_025059,NM_017909	chr6,chr6	+,-	C6orf97,RMND1	1198,-39862
chr15:77926069-77926323	chr15	+	77926110	77926340	True	NM_018200,NM_032808	chr15,chr15	+,-	HMG20A,LINGO1	-212918,-1401
chr21:15052641-15052895	chr21	+	15052837	15052897	True	NR_026755,NM_174981	chr21,chr21	-,+	C21orf15,POTED	167838,-70390
chr17:35848868-35849307	chr17	+	35848872	35849245	True	NM_198839,NM_007026	chr17,chr17	-,+	ACACA,DUSP14	-81970,705
chr19:6435923-6436228	chr19	+	6436079	6436277	True	NM_139161,NM_173637	chr19,chr19	+,-	CRB3,SLC25A41	27982,-2289
chr17:40195015-40195570	chr17	+	40195196	40195570	True	NM_017595,NR_029431	chr17,chr17	+,-	NKIRAS2,DNAJC7	-23160,-25481
chr16:66726664-66727619	chr16	+	66727199	66727598	True	NR_037619,NM_178818,NM_181521	chr16,chr16,chr16	+,-,-	CMTM3,CMTM4,CMTM4	-88616,3069,3069
chr11:118757464-118758749	chr11	+	118757537	118758784	True	NM_001716,NM_182557,NM_032966	chr11,chr11,chr11	+,-,+	CXCR5,BCL9L,CXCR5	-3048,22879,5316
chr11:64888212-64888937	chr11	+	64888414	64888968	True	NM_001997,NR_037568,NR_037567,NM_014205,NM_003273,NM_004927	chr11,chr11,chr11,chr11,chr11,chr11	-,+,+,-,+,+	FAU,MRPL49,MRPL49,ZNHIT2,TM7SF2,MRPL49	754,747,686,-3244,-9125,747
chr15:53092135-53092939	chr15	+	53092219	53092877	True	NM_004498,NM_002748	chr15,chr15	-,+	ONECUT1,MAPK6	-10010,-780859
chr5:746501-748241	chr5	+	746766	748266	True	NM_018140,NM_007030	chr5,chr5	+,-	CEP72,TPPP	-134412,-53256
chr5:746501-748241	chr5	+	839054	839466	False	NM_001166260,NM_024786	chr5,chr5	+,-	TRIP13,ZDHHC11	53502,11685
chr20:3661810-3662321	chr20	+	3661820	3662236	True	NM_153202,NM_001197327,NM_025220	chr20,chr20,chr20	-,+,-	ADAM33,HSPA12B,ADAM33	552,51080,552
chr12:53493385-53493765	chr12	+	53493400	53493482	True	NM_002178,NM_003578,NM_032840	chr12,chr12,chr12	+,+,-	IGFBP6,SOAT2,SPRYD3	-2015,3791,-20196
chr17:37825627-37825890	chr17	+	37825633	37825923	True	NM_002686,NM_003673,NM_033419	chr17,chr17,chr17	+,+,-	PNMT,TCAP,PGAP3	-1178,-4086,18437
chr20:61849663-61850090	chr20	+	61849675	61850135	True	NM_022161,NM_017798	chr20,chr20	+,-	BIRC7,YTHDF1	17140,-2137
chr17:39744492-39745048	chr17	+	39744573	39744961	True	NM_005801,NM_000526	chr17,chr17	+,-	EIF1,KRT14	100165,-1426
chr17:40087662-40088715	chr17	+	40087687	40088757	True	NM_198830,NM_031421	chr17,chr17	-,+	ACLY,TTC25	-12415,-850
chrX:154304518-154306077	chrX	+	154305017	154306101	True	NM_001018024,NM_024332,NM_001018055,NM_001018025	chrX,chrX,chrX,chrX	-,+,+,-	MTCP1NB,BRCC3,BRCC3,MTCP1	-5470,-5359,-5359,-5470
chr6:24122492-24123551	chr6	+	24122598	24123311	True	NM_016356,NM_080723	chr6,chr6	-,+	DCDC2,NRSN1	235026,3102
chr18:55892950-55894550	chr18	+	55893184	55894498	True	NM_001144966,NM_052947	chr18,chr18	+,-	NEDD4L,ALPK2	-4469,401741
chr19:48829039-48830380	chr19	+	48829073	48830197	True	NM_144577,NM_001425	chr19,chr19	-,+	CCDC114,EMP3	-5741,-495
chr4:156679486-156680194	chr4	+	156679508	156679833	True	NM_017419,NM_000857	chr4,chr4	-,+	ACCN5,GUCY1B3	107643,292
chr9:114548637-114550585	chr9	+	114549050	114549774	True	NM_003358,NM_173521	chr9,chr9	+,-	UGCG,C9orf84	109431,-3271
chr17:6739041-6740804	chr17	+	6739148	6740829	True	NR_002710,NM_053285	chr17,chr17	+,-	ALOX12P2,TEKT1	16065,-4088
chr19:52771807-52772168	chr19	+	52771806	52772097	True	NM_001010851,NM_001102657	chr19,chr19	+,-	ZNF766,ZNF836	726,-96910
chr12:52307638-52307874	chr12	+	52307752	52307912	True	NM_001077401,NM_000020,NM_001013690	chr12,chr12,chr12	+,+,-	ACVRL1,ACVRL1,FIGNL2	-1690,-6601,-82051
chr17:61516748-61517662	chr17	+	61516927	61517573	True	NM_001017917,NM_001017916,NM_000789,NM_001915	chr17,chr17,chr17,chr17	-,-,+,-	CYB561,CYB561,ACE,CYB561	684,6022,36848,6199
chr9:90111586-90112191	chr9	+	90112042	90112232	True	NR_036691,NM_004938	chr9,chr9	-,+	LOC494127,DAPK1	-411902,523
chr17:61626294-61627764	chr17	+	61627058	61627775	True	NM_005828,NM_001915	chr17,chr17	+,-	DCAF7,CYB561	46,-103336
chr5:72981739-72982434	chr5	+	72981762	72982251	True	NM_001177693,NM_023039	chr5,chr5	+,-	RGNEF,ANKRA2	-59838,-120251
chr8:37462539-37463689	chr8	+	37462703	37463711	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	89589,141903
chr9:89563779-89564076	chr9	+	89563884	89564102	True	NM_002048,NM_001001709	chr9,chr9	-,+	GAS1,C9orf170	-1780,199456
chr16:31191148-31191583	chr16	+	31191274	31191572	True	NM_004960,NM_001170937,NM_013258,NM_001170634,NR_028388	chr16,chr16,chr16,chr16,chr16	+,+,-,+,+	FUS,FUS,PYCARD,FUS,FUS	-22,-22,22575,-22,-22
chr12:109575744-109577463	chr12	+	109576033	109577332	True	NM_001093,NM_001205180	chr12,chr12	+,-	ACACB,ALKBH2	-131,-44740
chr10:72200281-72200510	chr10	+	72200326	72200486	True	NM_018055,NM_004096	chr10,chr10	-,+	NODAL,EIF4EBP2	1029,-36516
chr14:21870071-21871259	chr14	+	21870151	21871279	True	NR_002916,NM_014828,NR_003029	chr14,chr14,chr14	-,+,-	SNORD8,TOX4,SNORD9	-4591,74055,-9739
chr1:144520663-144521161	chr1	+	144520857	144521077	True	NR_024584,NM_001037675	chr1,chr1	-,+	LOC728875,NBPF9	942,93881
chr1:144520663-144521161	chr1	+	143744454	143744792	False	NR_033189,NR_027469,NR_027468	chr1,chr1,chr1	+,-,-	LOC100130000,LOC100286793,FLJ39739	-57663,133,3
chr1:144520663-144521161	chr1	+	144340794	144341132	False	NR_024584,NM_001037675,NR_024510,NR_024511	chr1,chr1,chr1,chr1	-,+,-,-	LOC728875,NBPF9,LOC728855,LOC728855	961,273826,-21,-21
chr1:144520663-144521161	chr1	+	147931983	147932321	False	NM_001097616,NR_027468	chr1,chr1	+,-	GPR89C,FLJ39739	-506755,-3
chr1:144520663-144521161	chr1	-	149576105	149576443	False	NM_001024599,NR_024510	chr1,chr1	-,+	HIST2H2BF,LOC728855	-176876,9
chr18:52616520-52617231	chr18	+	52616525	52617262	True	NM_004163,NM_001143829,NM_025214	chr18,chr18,chr18	+,-,-	RAB27B,CCDC68,CCDC68	-120742,8067,9527
chr14:57946968-57947311	chr14	+	57946968	57947360	True	NM_018168,NM_001011713	chr14,chr14	-,+	C14orf105,NAA30	13266,-89760
chr16:29083436-29084435	chr16	+	29083436	29084412	True	NM_024816,NR_003369	chr16,chr16	-,+	RABEP2,RRN3P2	-146904,1750
chr16:29083436-29084435	chr16	-	21834591	21834641	False	NM_170664,NR_003370	chr16,chr16	+,-	OTOA,RRN3P1	-118358,-4096
chr12:50794917-50795176	chr12	+	50794959	50795079	True	NR_033200,NM_052879,NM_001145475,NM_199190,NM_001170804,NM_001170803,NM_199188,NM_001170808	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,-,+,+,+,+,+	LARP4,LARP4,FAM186A,LARP4,LARP4,LARP4,LARP4,LARP4	-418,-418,-4554,-418,-418,-418,-418,-418
chr9:104357483-104357846	chr9	+	104357633	104357893	True	NM_019592,NM_147180	chr9,chr9	+,-	RNF20,PPP3R2	-61551,-350
chr7:140882366-140883675	chr7	+	140882379	140883673	True	NM_053035,NM_001195278	chr7,chr7	-,+	MRPS33,LOC100131199	-167598,-108399
chr15:72766313-72766551	chr15	+	72766335	72766515	True	NM_000520,NM_005744	chr15,chr15	-,+	HEXA,ARIH1	-97815,151
chr8:145082717-145083295	chr8	+	145082791	145083319	True	NM_032789,NM_001134374,NM_198572	chr8,chr8,chr8	-,+,+	PARP10,SPATC1,SPATC1	-22156,3262,3262
chrX:153138585-153139641	chrX	+	153138672	153139572	True	NM_000425,NM_001143963,NM_024003,NR_027419	chrX,chrX,chrX,chrX	-,-,-,+	L1CAM,L1CAM,L1CAM,AVPR2	1877,1877,1877,28412
chr5:52776169-52776446	chr5	+	52776191	52776471	True	NM_013409,NM_006350,NM_176806	chr5,chr5,chr5	+,+,-	FST,FST,MOCS2	123,123,-370593
chr17:62780449-62781079	chr17	+	62780536	62780890	True	NR_026899,NM_138363,NR_027487	chr17,chr17,chr17	-,+,-	LOC146880,CCDC45,LOC146880	-2419,-277429,-2914
chr1:183600637-183600973	chr1	+	183600738	183601024	True	NM_015149,NM_005717	chr1,chr1	+,-	RGL1,ARPC5	4183,4013
chr13:20727160-20728088	chr13	+	20727204	20728098	True	NM_021954,NM_001190965	chr13,chr13	-,+	GJA3,ZMYM2	7143,-194288
chr14:23908570-23909054	chr14	+	23908619	23908841	True	NM_000257,NM_001042635	chr14,chr14	-,+	MYH7,NGDN	-3749,30056
chr1:16764774-16765019	chr1	+	16764923	16765031	True	NM_018090,NM_198546,NM_001145277,NM_001145278	chr1,chr1,chr1,chr1	+,-,+,+	NECAP2,SPATA21,NECAP2,NECAP2	2135,-1004,2135,2135
chr6:33772950-33773399	chr6	+	33773015	33773401	True	NM_002224,NM_002418,NM_001184698,NM_001040109	chr6,chr6,chr6,chr6	+,-,-,-	ITPR3,MLN,MLN,MLN	-183910,-1222,-1222,-1222
chr3:110788933-110789507	chr3	+	110788935	110789381	True	NM_024508,NM_015480	chr3,chr3	-,+	ZBED2,PVRL3	524845,1483
chr12:122063660-122063890	chr12	+	122063872	122063938	True	NM_173855,NM_032790	chr12,chr12	-,+	MORN3,ORAI1	43672,516
chr1:6480935-6481149	chr1	+	6480938	6481146	True	NM_019089,NR_036218,NM_031475	chr1,chr1,chr1	-,-,+	HES2,MIR4252,ESPN	-959,8860,3701
chr19:1846607-1846993	chr19	+	1846886	1847040	True	NR_034114,NM_020695	chr19,chr19	+,-	LOC100288123,REXO1	-24850,1462
chr6:3754638-3755152	chr6	+	3754988	3755170	True	NM_183373,NM_012135	chr6,chr6	-,+	C6orf145,FAM50B	-2742,94461
chr15:88799874-88800082	chr15	+	88799956	88800018	True	NM_002530,NM_001012338,NM_022839,NM_001007156	chr15,chr15,chr15,chr15	-,-,+,-	NTRK3,NTRK3,MRPS11,NTRK3	-295,-295,210665,-295
chr15:45003463-45004002	chr15	+	45003507	45003791	True	NM_004048,NM_001145112	chr15,chr15	+,-	B2M,PATL2	-39,-34421
chr22:25336485-25338053	chr22	+	25337064	25337571	True	NM_001145206,NM_001001663	chr22,chr22	+,-	KIAA1671,TMEM211	86369,-1750
chr11:111169529-111169747	chr11	+	111169561	111169719	True	NM_001136105,NR_034154	chr11,chr11	+,-	C11orf93,C11orf92	256,870
chr4:681318-681559	chr4	+	681319	681513	True	NM_002477,NM_032219	chr4,chr4	+,-	MYL5,MFSD7	-9659,1510
chr1:161015405-161015631	chr1	+	161015465	161015675	True	NM_001113206,NM_001113207,NM_001113205,NR_033385,NM_207005,NM_007122	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,-	TSTD1,TSTD1,TSTD1,KLHDC9,USF1,USF1	-6691,-6691,-6691,52475,132,132
chr5:130596481-130597465	chr5	+	130596707	130597284	True	NR_024610,NM_001038702,NM_020240	chr5,chr5,chr5	-,+,+	HINT1,CDC42SE2,CDC42SE2	-95673,2417,2417
chr16:67451207-67452661	chr16	+	67451218	67451961	True	NM_013304,NM_000196	chr16,chr16	-,+	ZDHHC1,HSD11B2	-879,13074
chr1:223741598-223741888	chr1	+	223741626	223741818	True	NM_001146068,NM_001143962	chr1,chr1	+,-	CAPN2,CAPN8	147476,111668
chr1:223741598-223741888	chr9	+	138941131	138941323	False	NM_015597,NM_144653	chr9,chr9	+,-	GPSM1,NACC2	280608,45858
chr10:44145141-44145727	chr10	+	44145175	44145761	True	NM_001005368,NM_145312,NM_006973	chr10,chr10,chr10	-,+,-	ZNF32,ZNF485,ZNF32	-1023,-43371,-849
chr4:85417367-85417610	chr4	+	85417429	85417595	True	NM_001263,NM_006168	chr4,chr4	+,-	CDS1,NKX6-1	86461,1842
chr3:58987457-58987728	chr3	+	58987457	58987778	True	NM_198463,NM_153331	chr3,chr3	-,+	C3orf67,KCTD6	47988,-503416
chr2:107126097-107127361	chr2	+	107126191	107127407	True	NM_001144013,NR_003506	chr2,chr2	-,+	RGPD3,PLGLA	-41390,-123473
chr2:107126097-107127361	chr2	-	87065421	87066381	False	NR_037931,NM_001178100	chr2,chr2	+,-	LOC100286979,CD8B	22566,22716
chr4:84204857-84205457	chr4	+	84204898	84205322	True	NM_015697,NM_016067	chr4,chr4	-,+	COQ2,MRPS18C	795,171795
chr11:61584758-61585432	chr11	+	61584793	61585290	True	NM_013402,NM_004265,NR_031729	chr11,chr11,chr11	-,+,-	FADS1,FADS2,MIR1908	-264,10422,-2081
chr14:64938741-64939915	chr14	+	64938745	64939840	True	NM_006977,NM_004857	chr14,chr14	-,+	ZBTB25,AKAP5	30771,-6580
chr17:48227445-48227764	chr17	+	48227483	48227743	True	NM_032595,NM_000023	chr17,chr17	-,+	PPP1R9B,SGCA	184,15622
chr5:159850694-159852652	chr5	+	159850698	159852514	True	NM_006425,NM_004219	chr5,chr5	-,+	SLU7,PTTG1	-4530,-1884
chr1:110255333-110255684	chr1	+	110255435	110255633	True	NM_000851,NM_000849	chr1,chr1	+,-	GSTM5,GSTM3	-622,28077
chr16:3653744-3654087	chr16	+	3653778	3653958	True	NM_005223,NM_032444	chr16,chr16	+,-	DNASE1,SLX4	48981,7677
chr19:2247238-2247498	chr19	+	2247240	2247452	True	NR_036207,NM_144616,NM_000479	chr19,chr19,chr19	+,-,+	MIR4321,JSRP1,AMH	3185,9020,1660
chr19:54702591-54702977	chr19	+	54702696	54702997	True	NM_001146056,NM_001146082,NM_001146083,NM_024075,NM_024298,NM_001013,NM_001077446	chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,+,-,+,+	MBOAT7,MBOAT7,MBOAT7,TSEN34,MBOAT7,RPS9,TSEN34	-8963,-8963,-8963,-8635,-8963,1728,-7650
chr1:215749570-215749841	chr1	+	215749727	215749796	True	NM_206933,NM_016121	chr1,chr1	-,+	USH2A,KCTD3	846995,-9047
chr17:38295369-38295872	chr17	+	38295477	38295639	True	NM_021724,NM_007359	chr17,chr17	-,+	NR1D1,CASC3	-38504,867
chr5:15501195-15501676	chr5	+	15501296	15501672	True	NM_054027,NM_012304	chr5,chr5	-,+	ANKH,FBXL7	-629409,-1042
chr3:53152656-53152952	chr3	+	53152698	53152942	True	NM_006254,NM_052859	chr3,chr3	+,-	PRKCD,RFT1	42280,11578
chr14:101035905-101036200	chr14	+	101035985	101036101	True	NR_024096,NM_001159531,NM_020836	chr14,chr14,chr14	+,-,-	C14orf70,BEGAIN,BEGAIN	87503,-1578,80
chr1:152769304-152770400	chr1	+	152769405	152770198	True	NM_178352,NM_178351	chr1,chr1	+,-	LCE1D,LCE1C	-229,8960
chr7:150880966-150881220	chr7	+	150881041	150881111	True	NM_001142460,NM_080871,NM_001142459,NM_019015	chr7,chr7,chr7,chr7	-,-,-,+	ASB10,ASB10,ASB10,CHPF2	3419,3860,3419,48473
chr1:205819021-205819229	chr1	+	205819023	205819223	True	NM_152491,NM_181644	chr1,chr1	-,+	PM20D1,MFSD4	103,-280962
chr16:30103611-30103995	chr16	+	30103612	30103840	True	NM_002720,NM_004608,NM_001145524,NM_031477	chr16,chr16,chr16,chr16	+,-,-,-	PPP4C,TBX6,YPEL3,YPEL3	-16279,-407,3747,3731
chr11:74473648-74475432	chr11	+	74473860	74475310	True	NM_015424,NM_001098638	chr11,chr11	-,+	CHRDL2,RNF169	-31674,-13999
chr1:234044378-234044763	chr1	+	234044566	234044634	True	NM_173508,NM_005646	chr1,chr1	+,-	SLC35F3,TARBP1	-3939,570266
chr1:53792782-53793102	chr1	+	53792866	53793118	True	NM_004631,NM_033300,NM_000098,NM_001018054,NM_017522	chr1,chr1,chr1,chr1,chr1	-,-,+,-,-	LRP8,LRP8,CPT2,LRP8,LRP8	658,753,-130816,658,658
chr19:17446763-17447475	chr19	+	17447372	17447484	True	NM_133644,NM_001195422,NM_001128855,NM_020959,NM_032620	chr19,chr19,chr19,chr19,chr19	+,+,+,-,+	GTPBP3,GTPBP3,GTPBP3,ANO8,GTPBP3	841,-1635,841,-1734,841
chr14:104179763-104180414	chr14	+	104179873	104180387	True	NM_024071,NM_005432,NM_001198953,NM_001100118,NM_001100119	chr14,chr14,chr14,chr14,chr14	+,-,+,-,-	ZFYVE21,XRCC3,ZFYVE21,XRCC3,XRCC3	1693,1486,1693,1486,1486
chr3:85789977-85790583	chr3	+	85790014	85790391	True	NR_033860,NM_153184	chr3,chr3	-,+	LOC440970,CADM2	-871288,-14450
chr17:26667023-26667419	chr17	+	26667274	26667470	True	NM_174887,NM_021137	chr17,chr17	-,+	IFT20,TNFAIP1	-4779,-4777
chr2:85832024-85833411	chr2	+	85832075	85833362	True	NM_006590,NR_033179,NM_016494,NM_001013649,NM_001031738	chr2,chr2,chr2,chr2,chr2	+,-,+,-,-	USP39,TMEM150A,RNF181,C2orf68,TMEM150A	9920,-2253,-9289,5868,-2253
chr10:3214865-3215769	chr10	+	3215044	3215764	True	NM_002627,NM_014889	chr10,chr10	+,-	PFKP,PITRM1	-105343,-41
chr10:70167339-70167596	chr10	+	70167351	70167489	True	NM_001042417,NM_021644,NM_017987	chr10,chr10,chr10	-,+,-	RUFY2,HNRNPH3,RUFY2	-300,-75634,-405
chr3:129246645-129247944	chr3	+	129246910	129247910	True	NM_000539,NM_015103	chr3,chr3	+,-	RHO,PLXND1	-159,77722
chr7:131010571-131011396	chr7	+	131010585	131011057	True	NR_015431,NM_013255	chr7,chr7	-,+	FLJ43663,MKLN1	-217023,1537
chr7:27184174-27184436	chr7	+	27184282	27184416	True	NR_002795,NM_019102,NM_024014	chr7,chr7,chr7	+,-,-	HOXA11-AS1,HOXA5,HOXA6	40610,-995,3010
chr2:202092913-202093572	chr2	+	202093069	202093565	True	NM_001080124,NM_033355,NM_001127391,NM_001228,NM_033358	chr2,chr2,chr2,chr2,chr2	+,+,-,+,+	CASP8,CASP8,ALS2CR12,CASP8,CASP8	4600,4600,128600,4600,4600
chr15:40453284-40453573	chr15	+	40453283	40453541	True	NM_001003940,NM_001211	chr15,chr15	-,+	BMF,BUB1B	-52208,-124
chr1:179010863-179011477	chr1	+	179010900	179011498	True	NM_014864,NM_001136000	chr1,chr1	+,-	FAM20B,ABL2	-15879,100776
chr14:50082378-50083360	chr14	+	50082517	50083095	True	NM_002408,NM_001001	chr14,chr14	+,-	MGAT2,RPL36AL	4393,4312
chr9:136999628-136999899	chr9	+	136999655	136999945	True	NR_023344,NM_017588,NM_052821	chr9,chr9,chr9	-,+,+	RNU6ATAC,WDR5,WDR5	29791,1264,4968
chr19:23399939-23400155	chr19	+	23399939	23400083	True	NR_003662,NM_003430	chr19,chr19	+,-	RPSAP58,ZNF91	545732,178240
chr1:110008536-110008904	chr1	+	110008769	110008835	True	NM_001199774,NM_001040709	chr1,chr1	-,+	PSMA5,SYPL2	-39661,264
chr2:108915551-108915939	chr2	+	108915567	108915933	True	NM_176825,NR_024439	chr2,chr2	+,-	SULT1C2,LOC729121	-10523,-472984
chr5:55777162-55777397	chr5	+	55777269	55777405	True	NM_024669,NM_005921	chr5,chr5	-,+	ANKRD55,MAP3K1	-248083,333494
chr4:144256692-144256972	chr4	+	144256691	144256963	True	NM_001168235,NM_207123,NM_002039	chr4,chr4,chr4	-,+,+	FREM3,GAB1,GAB1	364915,1019,1019
chr21:19176367-19177753	chr21	+	19176438	19177577	True	NM_001100420,NM_001204175	chr21,chr21	-,+	C21orf91,CHODL	14177,112079
chr4:30723252-30723512	chr4	+	30723251	30723535	True	NM_002589,NM_000730,NM_032457,NM_001173523,NM_032456	chr4,chr4,chr4,chr4,chr4	+,-,+,+,+	PCDH7,CCKAR,PCDH7,PCDH7,PCDH7	-1265,-4231209,-1265,-1265,-1272
chr2:31804937-31805522	chr2	+	31804956	31805520	True	NM_014600,NM_000348	chr2,chr2	+,-	EHD3,SRD5A2	-348133,570
chr1:226922528-226923502	chr1	+	226922527	226923235	True	NM_002221,NM_000447	chr1,chr1	-,+	ITPKB,PSEN2	3691,135037
chrY:14472516-14472975	chrY	+	14472520	14472982	True	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	301315,60457
chr20:62288344-62289022	chr20	+	62288510	62289014	True	NR_037882,NM_016434,NM_015894,NM_032957	chr20,chr20,chr20,chr20	+,+,-,+	RTEL1-TNFRSF6B,RTEL1,STMN3,RTEL1	148,148,-3730,148
chr16:58767093-58767356	chr16	+	58767092	58767258	True	NM_002080,NM_024860	chr16,chr16	-,+	GOT2,SETD6	1038,-217760
chr8:144498453-144499633	chr8	+	144498588	144499652	True	NM_201589,NM_052924	chr8,chr8	-,+	MAFA,RHPN1	13000,-47622
chr10:47748001-47748595	chr10	+	47748073	47748631	True	NR_024495,NM_001630	chr10,chr10	-,+	LOC642826,ANXA8L2	-504579,-1204
chr10:47748001-47748595	chr10	-	47172462	47172956	False	NM_001137549,NM_001137548,NM_005972,NM_001137556,NM_001098845,NM_001040084	chr10,chr10,chr10,chr10,chr10,chr10	-,-,+,-,-,-	FAM25G,FAM25C,PPYR1,FAM25B,ANXA8L1,ANXA8	8782,8782,-88979,8782,1134,1216
chr10:47748001-47748595	chr10	+	48256390	48256884	False	NM_001137549,NM_001137548,NM_001137556,NM_001098845,NM_001040084,NM_002900	chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,-	FAM25G,FAM25C,FAM25B,ANXA8L1,ANXA8,RBP3	-8779,-8779,-8779,-1134,-1216,134157
chr10:47748001-47748595	chr10	-	49198281	49198775	False	NM_001137549,NM_001137548,NM_002750,NM_001137556	chr10,chr10,chr10,chr10	-,-,+,-	FAM25G,FAM25C,MAPK8,FAM25B	9100,9100,410911,9100
chrX:69663298-69664865	chrX	+	69663465	69664475	True	NM_020730,NM_016484,NM_021120	chrX,chrX,chrX	+,-,+	DLG3,PDZD11,DLG3	7679,-153667,229
chr17:46177423-46178201	chr17	+	46177560	46178186	True	NM_001127228,NM_152244,NM_006807,NM_013323	chr17,chr17,chr17,chr17	-,+,-,+	CBX1,SNX11,CBX1,SNX11	747,6733,424,6760
chr20:33103437-33103856	chr20	+	33103521	33103701	True	NM_080476,NM_014183	chr20,chr20	-,+	PIGU,DYNLRB1	161438,502
chr4:100361290-100362831	chr4	+	100361342	100362144	True	NM_000673,NM_001166504,NM_032149	chr4,chr4,chr4	-,-,+	ADH7,ADH7,C4orf17	-4675,-5051,70016
chr6:71667489-71667711	chr6	+	71667514	71667760	True	NM_080742,NM_021940	chr6,chr6	-,+	B3GAT2,SMAP1	-726,-290086
chr19:41880148-41881094	chr19	+	41880234	41880986	True	NM_001098824,NM_030578,NM_001098821,NM_001098822,NM_001098823,NM_001042595	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+	TMEM91,B9D2,TMEM91,TMEM91,TMEM91,TMEM91	1451,-10156,1451,1451,1451,2182
chr3:151158691-151160314	chr3	+	151158703	151160103	True	NM_001178146,NR_031678,NM_001178145	chr3,chr3,chr3	-,+,-	IGSF10,MIR548H2,IGSF10	-125,187216,-125
chr20:23384575-23385655	chr20	+	23384635	23385585	True	NM_138283,NM_022080	chr20,chr20	+,-	CSTL1,NAPB	34736,16627
chr1:119907541-119908277	chr1	+	119907605	119908228	True	NM_001005783,NM_016527,NM_201263	chr1,chr1,chr1	+,+,-	HAO2,HAO2,WARS2	3173,3173,-224310
chr12:133564169-133564685	chr12	+	133564187	133564447	True	NM_019591,NM_001164715	chr12,chr12	+,-	ZNF26,ZNF605	-1182,-31295
chr19:10980027-10980886	chr19	+	10980316	10980690	True	NM_199141,NM_006858	chr19,chr19	+,-	CARM1,TMED1	1562,-33333
chr6:34433280-34433531	chr6	+	34433385	34433485	True	NM_001204091,NM_020804	chr6,chr6	-,+	RPS10,PACSIN1	-39483,367
chr12:70008571-70008817	chr12	+	70008626	70008833	True	NM_201550,NM_001198842	chr12,chr12	-,+	LRRC10,CCT2	-3684,-29221
chr2:240969431-240970112	chr2	+	240969534	240970114	True	NM_001005853,NR_037808,NM_004544	chr2,chr2,chr2	-,+,-	OR6B2,LOC150935,NDUFA10	-138,-285031,-4715
chr2:240969431-240970112	chr2	+	240985177	240985227	False	NR_037808,NM_173351,NM_001080835	chr2,chr2,chr2	+,-,-	LOC150935,OR6B3,PRR21	-300674,312,-2778
chr22:41138366-41138914	chr22	+	41138459	41138832	True	NM_006358,NM_005297	chr22,chr22	-,+	SLC25A17,MCHR1	76619,-63328
chr1:160676022-160676672	chr1	+	160676154	160676716	True	NM_001778,NM_021181	chr1,chr1	-,+	CD48,SLAMF7	4922,32360
chr16:65256469-65257365	chr16	+	65256508	65257266	True	NM_001795,NM_001797	chr16,chr16	+,-	CDH5,CDH11	1143258,-100589
chr2:69238108-69239674	chr2	+	69238278	69239551	True	NM_032208,NM_182536,NM_053034,NM_018153	chr2,chr2,chr2,chr2	+,-,+,+	ANTXR1,GKN2,ANTXR1,ANTXR1	724,-58176,724,724
chr4:77819978-77821845	chr4	+	77819977	77821623	True	NM_018243,NM_001029870	chr4,chr4	+,-	SEPT11,ANKRD56	49271,-975
chr6:152632707-152633001	chr6	+	152632713	152632850	True	NM_025107,NM_015293	chr6,chr6	+,-	MYCT1,SYNE1	386179,6680
chr8:145090152-145090962	chr8	+	145090442	145090778	True	NM_017570,NM_001134374,NM_198572	chr8,chr8,chr8	-,+,+	OPLAH,SPATC1,SPATC1	24856,-3911,-3911
chrX:149738454-149739105	chrX	+	149738487	149739131	True	NM_001184808,NM_000252	chrX,chrX	-,+	CD99L2,MTM1	328208,-1496
chr22:43579830-43580955	chr22	+	43580043	43580937	True	NM_015140,NM_007311	chr22,chr22	-,+	TTLL12,TSPO	2250,-32559
chr2:34092386-34092590	chr2	+	34092441	34092627	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-353565,-139157
chr1:35372155-35373102	chr1	+	35372262	35373052	True	NM_001080418,NM_002060	chr1,chr1	-,+	DLGAP3,GJA4	-1278,-113714
chr20:39658369-39659345	chr20	+	39658373	39659357	True	NM_015035,NM_003286	chr20,chr20	-,+	ZHX3,TOP1	269433,-962
chr17:5404599-5405258	chr17	+	5404605	5405287	True	NM_001162371,NM_024039	chr17,chr17	-,+	LOC728392,MIS12	-286,-14409
chr15:59396302-59396939	chr15	+	59396503	59396935	True	NM_004701,NR_031750	chr15,chr15	+,-	CCNB2,MIR2116	384,66576
chr19:14631412-14631659	chr19	+	14631416	14631482	True	NR_038104,NM_006145,NM_138501,NR_038103,NR_030369	chr19,chr19,chr19,chr19,chr19	+,-,+,+,+	TECR,DNAJB1,TECR,TECR,MIR639	8896,-2215,8896,8896,8872
chr19:569287-569549	chr19	+	569287	569357	True	NM_198589,NM_005035,NM_001728,NM_198591	chr19,chr19,chr19,chr19	+,-,+,+	BSG,POLRMT,BSG,BSG	3179,64261,3179,1967
chr22:32593836-32594421	chr22	+	32593838	32594322	True	NM_001098527,NR_033411,NM_006605,NM_001159546,NM_001159545	chr22,chr22,chr22,chr22,chr22	-,+,-,-,-	RFPL2,SLC5A1,RFPL2,RFPL2,RFPL2	5192,-138732,-4372,4265,6446
chr15:43906815-43907759	chr15	+	43906833	43907512	True	NM_020990,NM_153700	chr15,chr15	+,-	CKMT1B,STRC	-21632,3537
chr15:43906815-43907759	chr15	+	44006295	44006974	False	NM_001015001,NR_002318	chr15,chr15	+,-	CKMT1A,CATSPER2P1	-21262,31573
chr16:67924499-67925826	chr16	+	67924552	67925475	True	NM_006742,NM_001907,NM_198443	chr16,chr16,chr16	+,-,+	PSKH1,CTRL,NRN1L	1699,40353,-5823
chrY:7143299-7144071	chrY	+	7143409	7143997	True	NR_028062,NM_001143	chrY,chrY	+,-	PRKY,AMELY	-1447,-401341
chr2:223290357-223290703	chr2	+	223290376	223290732	True	NM_013942,NM_152386	chr2,chr2	-,+	PAX3,SGPP2	-126661,-1105
chr15:41803735-41803947	chr15	+	41803734	41803842	True	NM_002220,NM_206961,NM_002344,NM_001135685	chr15,chr15,chr15,chr15	+,-,-,-	ITPKA,LTK,LTK,LTK	-17663,2293,2293,2293
chr20:34698156-34699427	chr20	+	34698157	34699357	True	NM_177996,NR_027451	chr20,chr20	+,-	EPB41L1,LOC647979	990,-59275
chr17:74137617-74138280	chr17	+	74137674	74138290	True	NM_180990,NM_001454	chr17,chr17	+,-	ZACN,FOXJ1	-62462,-294
chr12:103311274-103312607	chr12	+	103311297	103312657	True	NM_000277,NM_004316	chr12,chr12	-,+	PAH,ASCL1	-46,38794
chr16:10838182-10839041	chr16	+	10838225	10839003	True	NM_002484,NM_144674	chr16,chr16	+,-	NUBP1,TEKT5	-578,-49423
chr1:2157821-2158069	chr1	+	2157821	2158091	True	NM_001146310,NM_003036	chr1,chr1	-,+	C1orf86,SKI	-18649,2042
chr16:28549462-28550176	chr16	+	28549474	28550162	True	NM_138414,NM_001042483,NM_012385	chr16,chr16,chr16	+,-,-	CCDC101,NUPR1,NUPR1	15086,383,383
chr16:20902607-20902836	chr16	+	20902635	20902832	True	NM_001128301,NM_001128302,NM_173475,NM_020424	chr16,chr16,chr16,chr16	+,+,-,+	LYRM1,LYRM1,DCUN1D3,LYRM1	9242,9242,8782,8724
chr10:135208003-135208620	chr10	+	135208158	135208616	True	NM_138384,NM_004092	chr10,chr10	+,-	MTG1,ECHS1	-588,-21250
chr16:46851522-46853514	chr16	+	46851648	46853562	True	NM_133443,NM_001001436	chr16,chr16	+,-	GPT2,C16orf87	64745,11562
chr15:75135817-75136231	chr15	+	75135857	75136257	True	NM_001030005,NM_001099436	chr15,chr15	+,-	CPLX3,ULK3	-16957,-305
chr1:145552958-145553917	chr1	+	145553165	145553732	True	NM_144698,NM_001012758	chr1,chr1	+,-	ANKRD35,NUDT17	-4008,35756
chr12:105375786-105377438	chr12	+	105375786	105377211	True	NM_152318,NM_032148	chr12,chr12	+,-	C12orf45,SLC41A2	2886,-53314
chr19:5791195-5791700	chr19	+	5791229	5791387	True	NM_020175,NM_001134316,NM_001161619,NM_004558	chr19,chr19,chr19,chr19	-,-,-,+	DUS3L,PRR22,DUS3L,NRTN	12,-6453,12,32430
chr12:50216787-50218393	chr12	+	50217241	50218387	True	NM_001037806,NR_027500,NR_027501,NR_027499	chr12,chr12,chr12,chr12	-,+,+,+	NCKAP5L,LOC100286844,LOC100286844,LOC100286844	3871,3938,3938,3938
chr10:118956105-118956760	chr10	+	118956184	118956678	True	NR_037436,NM_181840	chr10,chr10	-,+	MIR3663,KCNK18	-28899,321
chr9:114286767-114287420	chr9	+	114286855	114287412	True	NM_001007169,NM_001080398,NM_133464	chr9,chr9,chr9	+,-,+	ZNF483,KIAA0368,ZNF483	34,-39830,34
chr5:79331569-79331781	chr5	+	79331568	79331790	True	NM_003248,NM_001167741	chr5,chr5	+,-	THBS4,MTX3	-449,-44480
chr5:149539562-149540742	chr5	+	149539740	149540722	True	NM_001804,NM_002609	chr5,chr5	+,-	CDX1,PDGFRB	5621,-4318
chr19:50664672-50665394	chr19	+	50664692	50665264	True	NM_001145809,NM_152358	chr19,chr19	+,-	MYH14,IZUMO2	41620,1324
chr12:8087208-8087441	chr12	+	8087290	8087490	True	NM_006931,NM_018416	chr12,chr12	-,+	SLC2A3,FOXJ2	1452,97868
chr8:74907468-74908953	chr8	+	74907781	74908281	True	NM_005648,NM_015364,NM_001195797	chr8,chr8,chr8	-,+,+	TCEB1,LY96,LY96	-23259,-4269,-4269
chr9:116104776-116106677	chr9	+	116104972	116106565	True	NM_001012361,NM_145241,NM_017688	chr9,chr9,chr9	-,-,+	WDR31,WDR31,BSPRY	-2352,-2352,5246
chr7:19812171-19812590	chr7	+	19812290	19812596	True	NM_152774,NM_002214	chr7,chr7	-,+	TMEM196,ITGB8	-24,558128
chr8:79428303-79428534	chr8	+	79428359	79428439	True	NM_000880,NM_006823,NM_181839	chr8,chr8,chr8	-,+,+	IL7,PKIA,PKIA	289369,-74,-74
chr11:77734220-77735353	chr11	+	77734447	77735118	True	NM_023930,NM_003251	chr11,chr11	-,+	KCTD14,THRSP	-127,39788
chr15:93199128-93199534	chr15	+	93199198	93199554	True	NR_033769,NM_207446	chr15,chr15	+,-	ASB9P1,FAM174B	139159,-167
chr7:151105209-151106284	chr7	+	151105208	151106245	True	NR_034012,NR_034013,NM_198285	chr7,chr7,chr7	+,+,-	LOC100131176,LOC100131176,WDR86	76,76,929
chr22:17077072-17077671	chr22	+	17077344	17077526	True	NM_014406,NR_001591	chr22,chr22	-,+	CCT8L2,psiTPTE22	-3644,5274
chr3:172433554-172434102	chr3	+	172433941	172434127	True	NM_001146278,NM_020792,NM_018098,NM_001146277,NM_001146276	chr3,chr3,chr3,chr3,chr3	-,-,+,-,-	NCEH1,NCEH1,ECT2,NCEH1,NCEH1	-4933,-4933,38170,-4933,-4933
chr1:203188391-203189679	chr1	+	203188596	203189622	True	NM_003465,NM_006763	chr1,chr1	-,+	CHIT1,BTG2	9288,85041
chr3:46875722-46876652	chr3	+	46875747	46876481	True	NM_000316,NM_182702	chr3,chr3	+,-	PTH1R,PRSS42	42754,-162
chr1:230513520-230513968	chr1	+	230513529	230513957	True	NM_001145036,NM_024554	chr1,chr1	+,-	COG2,PGBD5	264244,-138
chr13:28560957-28562390	chr13	+	28561201	28561951	True	NM_001105577,NR_002162	chr13,chr13	-,+	PRHOXNB,ATP5EP2	873,-41909
chr4:144130101-144131338	chr4	+	144130385	144131342	True	NM_032557,NM_003866	chr4,chr4	+,-	USP38,INPP4B	-24368,-362781
chr3:10026368-10027500	chr3	+	10026450	10027089	True	NM_018447,NM_033084	chr3,chr3	-,+	TMEM111,FANCD2	1497,41023
chr10:75672328-75672751	chr10	+	75672617	75672763	True	NM_002658,NM_001001791,NM_001145031	chr10,chr10,chr10	+,-,+	PLAU,C10orf55,PLAU	-1813,9822,-1813
chr10:85982087-85983434	chr10	+	85982115	85983483	True	NM_001017924,NM_001012720	chr10,chr10	-,+	LRIT2,RGR	1851,21325
chr21:14410906-14411637	chr18	-	15329288	15329418	False	NR_027417,NR_036153	chr18,chr18	-,+	LOC644669,MIR3156-2	-3370,-499174
chr21:14410906-14411637	chr2	-	132918288	132918338	True	NM_001508,NR_027019	chr2,chr2	+,-	GPR39,ANKRD30BL	255808,1237
chr8:13424417-13425818	chr8	+	13424514	13425694	True	NM_024767,NM_001007090	chr8,chr8	-,+	DLC1,C8orf48	-52085,-213
chr10:96112682-96112889	chr10	+	96112714	96112934	True	NM_022451,NM_015188	chr10,chr10	-,+	NOC3L,TBC1D12	9799,49251
chr11:7985012-7985676	chr11	+	7985176	7985454	True	NM_003754,NM_176821	chr11,chr11	+,-	EIF3F,NLRP10	23412,-117
chr9:86518532-86520124	chr9	+	86518537	86519909	True	NM_017576,NM_024945	chr9,chr9	-,+	KIF27,RMI1	16495,75727
chr1:53094174-53094578	chr1	+	53094313	53094511	True	NM_023077,NM_001042693	chr1,chr1	-,+	SELRC1,FAM159A	69597,4554
chr8:90989175-90989470	chr8	+	90989195	90989280	True	NM_002485,NM_001359	chr8,chr8	-,+	NBN,DECR1	7676,24299
chr16:2731604-2731832	chr16	+	2731653	2731723	True	NM_031948,NM_018992	chr16,chr16	-,+	PRSS27,KCTD5	38887,771
chr4:5991305-5991556	chr4	+	5991327	5991603	True	NR_037863,NM_001014809	chr4,chr4	+,-	LOC285484,CRMP1	210856,-96542
chr5:72022271-72022492	chr5	+	72022480	72022540	True	NM_152625,NM_002270	chr5,chr5	-,+	ZNF366,TNPO1	-219231,89877
chr19:36119763-36119969	chr19	+	36119795	36119959	True	NM_000704,NM_024321	chr19,chr19	-,+	ATP4A,RBM42	-65235,20
chr2:132182626-132182846	chr2	+	132182630	132182894	True	NR_002826,NR_036499	chr2,chr2	-,+	LOC401010,LOC389043	19623,-22207
chr9:126034270-126035016	chr9	+	126034568	126034644	True	NM_173689,NM_001171137,NM_018387,NR_033234	chr9,chr9,chr9,chr9	+,-,-,-	CRB2,STRBP,STRBP,STRBP	83803,-3713,-3725,-3725
chr19:47164496-47164717	chr19	+	47164501	47164711	True	NM_005184,NM_145056	chr19,chr19	+,-	CALM3,DACT3	-60040,-106
chr4:25527307-25527621	chr4	+	25527584	25527668	True	NM_015187,NM_001177998	chr4,chr4	-,+	SEL1L3,SLC34A2	336992,129766
chr16:2825766-2826591	chr16	+	2825780	2826550	True	NM_001135086,NM_007108,NM_207013	chr16,chr16,chr16	+,-,-	PRSS41,TCEB2,TCEB2	21935,797,797
chr5:81268630-81269165	chr5	+	81268629	81268948	True	NM_031482,NM_012446,NM_001131028	chr5,chr5,chr5	+,-,+	ATG10,SSBP2,ATG10	-840,-221557,-840
chr15:91258454-91260099	chr15	+	91258758	91260134	True	NM_198527,NM_000057	chr15,chr15	-,+	HDDC3,BLM	215690,444
chr20:34040994-34041837	chr20	+	34041082	34041773	True	NM_007186,NM_000557	chr20,chr20	+,-	CEP250,GDF5	1449,-15055
chr17:74348648-74349088	chr17	+	74348764	74349066	True	NM_002766,NM_001142601	chr17,chr17	-,+	PRPSAP1,SPHK1	1214,31623
chr10:29106828-29107045	chr10	+	29106827	29106892	True	NR_033805,NM_012342	chr10,chr10	-,+	LOC220906,BAMBI	-285544,-140454
chr1:6485681-6487061	chr1	+	6485818	6486632	True	NM_019089,NR_036218,NM_031475	chr1,chr1,chr1	-,-,+	HES2,MIR4252,ESPN	-5839,3374,-1021
chr1:13737032-13737640	chr1	+	13737032	13737257	True	NM_001100114,NM_001099852,NM_001099850	chr1,chr1,chr1	+,+,-	PRAMEF21,PRAMEF20,PRAMEF18	5544,-176,-38627
chr1:13737032-13737640	chr1	+	13516191	13516383	False	NM_001100114,NM_001099852,NM_001099850	chr1,chr1,chr1	+,+,-	PRAMEF21,PRAMEF20,PRAMEF18	5579,-176,-38622
chr17:44076708-44077510	chr17_ctg5_hap1	-	790210	791018	False	NM_001007532,NR_024559	chr17_ctg5_hap1,chr17_ctg5_hap1	-,+	STH,LOC100128977	166,103675
chr17:44076708-44077510	chr17	+	44076730	44077538	True	NM_001007532,NR_024559	chr17,chr17	+,-	STH,LOC100128977	-166,-103851
chr1:167880830-167881537	chr1	+	167880984	167881559	True	NM_018417,NM_001017977,NM_001167749	chr1,chr1,chr1	-,+,-	ADCY10,DCAF6,ADCY10	1944,24237,1944
chr2:16083316-16083643	chr2	+	16083409	16083511	True	NR_026766,NM_005378	chr2,chr2	-,+	MYCNOS,MYCN	-1564,-2777
chr14:81982919-81984530	chr14	+	81982940	81984265	True	NM_005065,NM_000369	chr14,chr14	-,+	SEL1L,TSHR	15990,-561126
chr10:127568379-127569825	chr10	+	127568667	127569842	True	NM_018180,NM_145235	chr10,chr10	-,+	DHX32,FANK1	92,15265
chr19:54106044-54106464	chr19	+	54106360	54106512	True	NM_001012728,NR_002938	chr19,chr19	+,-	DPRX,LOC284379	28797,289
chr19:47552928-47554134	chr19	+	47553635	47553701	True	NM_002517,NM_017854	chr19,chr19	+,-	NPAS1,TMEM160	-29543,-1753
chr8:104511358-104511791	chr8	+	104511359	104511713	True	NM_001100117,NM_030780	chr8,chr8	+,-	RIMS2,SLC25A32	1262,-83891
chr16:32690215-32692059	chr16	+	32690222	32692016	True	NM_001205260,NM_001205265,NM_001099687,NM_001205259,NM_016212	chr16,chr16,chr16,chr16,chr16	-,-,-,-,-	LOC653550,TP53TG3B,TP53TG3B,LOC653550,TP53TG3	-2774,-2774,-2774,-2774,-2169
chr16:32690215-32692059	chr16	-	32260523	32261870	False	NR_033866,NM_003414	chr16,chr16	-,+	LOC390705,ZNF267	39483,-375496
chr16:32690215-32692059	chr16	-	33201019	33202811	False	NM_001205260,NM_001205265,NM_001205259,NM_001099687,NM_016212,NR_033866	chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,-	LOC653550,TP53TG3B,LOC653550,TP53TG3B,TP53TG3,LOC390705	2773,2773,2773,2773,2168,95942
chr16:32690215-32692059	chr16	-	33257552	33259346	False	NM_001205260,NM_001205265,NM_001205259,NM_001099687,NM_016212,NR_033866	chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,-	LOC653550,TP53TG3B,LOC653550,TP53TG3B,TP53TG3,LOC390705	2773,2773,2773,2773,2168,39407
chr22:25431307-25432605	chr22	+	25431422	25432566	True	NM_001001663,NM_001145206	chr22,chr22	-,+	TMEM211,KIAA1671	-96108,-7532
chr11:102476675-102477264	chr11	+	102476687	102477281	True	NM_001166,NM_004771	chr11,chr11	+,-	BIRC2,MMP20	-258772,18832
chr5:86563597-86563838	chr5	+	86563681	86563871	True	NM_001199189,NM_022650,NM_002890	chr5,chr5,chr5	-,+,+	CCNH,RASA1,RASA1	144900,894,279
chr19:11616646-11616988	chr19	+	11616645	11616961	True	NM_138783,NM_001299	chr19,chr19	-,+	ZNF653,CNN1	25,32617
chr8:21645988-21646473	chr8	+	21646130	21646322	True	NM_001495,NM_001165038,NM_001165039,NM_015024	chr8,chr8,chr8,chr8	-,-,-,+	GFRA2,GFRA2,GFRA2,XPO7	74,74,74,130857
chr6:32079458-32079730	chr6_mcf_hap5	+	3459313	3459607	False	NM_138717,NM_019105	chr6_mcf_hap5,chr6_mcf_hap5	+,-	PPT2,TNXB	41444,-2334
chr6:32079458-32079730	chr6_dbb_hap3	+	3358659	3358953	False	NM_138717,NM_019105	chr6_dbb_hap3,chr6_dbb_hap3	+,-	PPT2,TNXB	41448,-2334
chr6:32079458-32079730	chr6	+	32079485	32079779	True	NM_138717,NM_019105	chr6,chr6	+,-	PPT2,TNXB	41449,-2334
chr6:32079458-32079730	chr6_cox_hap2	+	3550147	3550441	False	NM_138717,NM_019105	chr6_cox_hap2,chr6_cox_hap2	+,-	PPT2,TNXB	41455,-2334
chr11:69517335-69517755	chr11	+	69517452	69517788	True	NM_005117,NM_053056	chr11,chr11	-,+	FGF19,CCND1	1368,-61630
chr19:12846514-12847201	chr19	+	12846589	12846809	True	NM_004317,NM_024038	chr19,chr19	+,-	ASNA1,C19orf43	1496,-1060
chr7:132259479-132260160	chr7	+	132259535	132260087	True	NM_001037126,NM_001105543,NM_020911	chr7,chr7,chr7	+,-,-	EXOC4,PLXNA4,PLXNA4	677735,1286,1286
chr1:1621574-1622814	chr1	+	1621822	1622731	True	NR_002946,NM_001110781	chr1,chr1	+,-	MMP23A,SLC35E2B	8646,1562
chr1:1621574-1622814	chr1	+	1675590	1676006	False	NM_182838,NM_001199787,NR_002946	chr1,chr1,chr1	-,-,+	SLC35E2,SLC35E2,MMP23A	1482,1482,-44267
chr14:53157178-53157576	chr14	+	53157428	53157494	True	NM_002806,NM_014584	chr14,chr14	+,-	PSMC6,ERO1L	16401,4981
chr1:76207998-76209189	chr1	+	76208015	76209119	True	NM_152697,NM_001127328	chr1,chr1	-,+	SLC44A5,ACADM	-131216,-18024
chr15:51640452-51642233	chr15	+	51641028	51641931	True	NM_181789,NM_031226	chr15,chr15	+,-	GLDN,CYP19A1	-7373,-10233
chr1:20304078-20304746	chr1	+	20304144	20304758	True	NM_000300,NM_001161729,NM_000929,NM_001161728,NM_001161727	chr1,chr1,chr1,chr1,chr1	-,-,+,-,-	PLA2G2A,PLA2G2A,PLA2G5,PLA2G2A,PLA2G2A	2224,1444,91942,2224,2224
chr12:53096910-53097121	chr12	+	53096992	53097136	True	NM_199187,NM_175078	chr12,chr12	+,-	KRT18,KRT77	245518,161
chr2:130881603-130883333	chr2	+	130881604	130883253	True	NM_001099771,NR_033903	chr2,chr2	-,+	POTEF,LOC285103	3593,3942
chr2:130881603-130883333	chr2	-	131970858	131972425	False	NM_001009993,NM_001083538	chr2,chr2	-,+	FAM168B,POTEE	-119854,3498
chr10:88286534-88287404	chr10	+	88286593	88286981	True	NM_015045,NM_001030015	chr10,chr10	-,+	WAPAL,OPN4	-5052,127332
chr19:47164775-47165005	chr19	+	47164787	47165043	True	NM_005184,NM_145056	chr19,chr19	+,-	CALM3,DACT3	-60326,-392
chr9:77698296-77698936	chr9	+	77698321	77698933	True	NM_012383,NM_017881,NR_023352,NM_001127603	chr9,chr9,chr9,chr9	+,-,-,-	OSTF1,C9orf95,C9orf95,C9orf95	4464,4250,4250,4250
chr1:179714509-179716447	chr1	+	179715026	179716414	True	NM_173509,NM_001199260	chr1,chr1	+,-	FAM163A,TOR1AIP2	-2790,130577
chr5:108083445-108084012	chr5	+	108083447	108083960	True	NM_005246,NM_001163315	chr5,chr5	+,-	FER,FBXL17	18,-365648
chr1:64037198-64038700	chr1	+	64037570	64038169	True	NM_014288,NM_002633	chr1,chr1	-,+	ITGB3BP,PGM1	-48735,20777
chr14:23941591-23942250	chr14	+	23941741	23942173	True	NM_000257,NM_001042635,NM_015514	chr14,chr14,chr14	-,+,+	MYH7,NGDN,NGDN	-36871,-2894,-2894
chrX:148855658-148856247	chrX	+	148855822	148856228	True	NM_016153,NM_032508,NM_005365,NM_001164415,NM_001080790	chrX,chrX,chrX,chrX,chrX	+,-,+,+,+	HSFX1,TMEM185A,MAGEA9,HSFX2,MAGEA9B	-147,-142335,7371,-147,7364
chrX:148855658-148856247	chrX	-	148676471	148676877	False	NM_016153,NM_005365,NM_001164415,NM_001171909,NM_001080790	chrX,chrX,chrX,chrX,chrX	-,-,-,+,-	HSFX1,MAGEA9,HSFX2,CXorf40A,MAGEA9B	147,-7362,147,-50456,-7355
chr16:85205539-85205819	chr16	+	85205638	85205862	True	NR_033984,NM_198491	chr16,chr16	+,-	LOC400548,FAM92B	-34933,-59524
chr7:86688468-86688707	chr7	+	86688545	86688737	True	NM_001142749,NM_001142326	chr7,chr7	-,+	KIAA1324L,DMTF1	327,92939
chr14:105713560-105714246	chr14	+	105713566	105714082	True	NM_145685,NM_033271	chr14,chr14	-,+	BRF1,BTBD6	190,796
chr3:51814129-51815345	chr3	+	51814154	51815303	True	NM_001085479,NM_001143833	chr3,chr3	+,-	IQCF3,IQCF6	47265,-951
chr5:145717265-145717875	chr5	+	145717387	145717699	True	NM_020117,NM_002700	chr5,chr5	-,+	LARS,POU4F3	-155093,887
chr12:56697685-56698764	chr12	+	56697855	56698509	True	NM_004077,NM_016584	chr12,chr12	-,+	CS,IL23A	-3680,34153
chr1:19578637-19578911	chr1	+	19578643	19578851	True	NM_016183,NM_015047	chr1,chr1	+,-	MRTO4,KIAA0090	-619,-597
chr12:121647203-121647696	chr12	+	121647214	121647449	True	NM_002560,NM_172226	chr12,chr12	+,-	P2RX4,CAMKK2	214,87157
chr20:35401014-35401883	chr20	+	35401024	35401684	True	NM_080628,NM_024918,NM_001145317,NM_001145316,NM_001145315,NM_001145318	chr20,chr20,chr20,chr20,chr20,chr20	+,-,-,-,-,-	C20orf118,DSN1,DSN1,DSN1,DSN1,DSN1	102885,520,596,520,596,596
chr1:111863041-111864061	chr1	+	111863067	111863833	True	NR_029429,NM_181643	chr1,chr1	-,+	PGCP1,C1orf88	68690,25361
chr11:119207210-119207818	chr11	+	119207247	119207721	True	NM_015645,NM_032015,NM_031433	chr11,chr11,chr11	-,+,-	C1QTNF5,RNF26,MFRP	9712,-2061,9712
chr6:36853750-36853985	chr6	+	36853845	36853941	True	NM_152734,NM_016059	chr6,chr6	+,-	C6orf89,PPIL1	-256,-11045
chr17:6897715-6898884	chr17	+	6897872	6898669	True	NM_000697,NR_029712	chr17,chr17	+,-	ALOX12,MIR195	714,22401
chr16:3404278-3406098	chr16	+	3404305	3406085	True	NM_012368,NM_001190476	chr16,chr16	+,-	OR2C1,MTRNR2L4	32,16248
chr16:11875720-11876424	chr16	+	11875736	11876360	True	NM_003498,NM_014153	chr16,chr16	+,-	SNN,ZC3H7A	-113506,14804
chr22:40303908-40305197	chr22	+	40304023	40305250	True	NM_004810,NM_152512	chr22,chr22	+,-	GRAP2,ENTHD1	-6988,-14229
chr17:65732349-65733760	chr17	+	65732424	65733604	True	NR_003706,NM_181655	chr17,chr17	+,-	SNORA38B,C17orf58	3181,256219
chrX:15348179-15348846	chrX	+	15348244	15348527	True	NR_033835,NR_033836,NM_020473,NM_002641,NM_203281	chrX,chrX,chrX,chrX,chrX	-,-,-,-,+	PIGA,PIGA,PIGA,PIGA,BMX	5200,5200,5200,5200,170372
chr16:56717094-56717464	chr16	+	56717247	56717463	True	NM_005952,NM_005950,NR_003669	chr16,chr16,chr16	+,-,+	MT1X,MT1G,MT1IP	-919,-15270,-7652
chr19:52147776-52148840	chr19	+	52147891	52148799	True	NR_029843,NM_001098612	chr19,chr19	+,-	MIR99B,SIGLEC14	47065,1383
chr11:44073671-44075334	chr11	+	44073674	44075144	True	NM_001031854,NM_021926	chr11,chr11	+,-	ACCSL,ALX4	-4202,256625
chr15:80359106-80360804	chr15	+	80359285	80360181	True	NM_004049,NM_019006	chr15,chr15	-,+	BCL2A1,ZFAND6	-95642,-7315
chr20:6744012-6744390	chr20	+	6744012	6744378	True	NM_017671,NM_001200	chr20,chr20	-,+	FERMT1,BMP2	-639821,4366
chr6:41513757-41514154	chr6	+	41513882	41513994	True	NM_001012426,NM_001012427,NM_007162,NM_138457	chr6,chr6,chr6,chr6	+,+,-,+	FOXP4,FOXP4,TFEB,FOXP4	169,169,188854,169
chr17:74073028-74073414	chr17	+	74073035	74073385	True	NM_003857,NM_180990,NM_014230	chr17,chr17,chr17	+,+,-	GALR2,ZACN,SRP68	-2194,1877,-4428
chr4:6578816-6579235	chr4	+	6578821	6579269	True	NM_020416,NM_015274	chr4,chr4	-,+	PPP2R2C,MAN2B2	-104495,-1970
chr1:76188830-76189952	chr1	+	76188976	76189952	True	NM_000016,NM_152697,NM_001127328	chr1,chr1,chr1	+,-,+	ACADM,SLC44A5,ACADM	90,-112177,90
chr9:21977658-21979072	chr9	+	21977825	21979106	True	NR_024274,NM_001195132,NM_000077,NM_058197	chr9,chr9,chr9,chr9	+,-,-,-	C9orf53,CDKN2A,CDKN2A,CDKN2A	-10745,-2693,-2693,-2999
chr5:760658-760908	chr5	+	760774	760900	True	NM_001166260,NM_007030	chr5,chr5	+,-	TRIP13,TPPP	132068,-67264
chr17:63795001-63795448	chr17	+	63795087	63795498	True	NM_002737,NM_001037325	chr17,chr17	+,-	PRKCA,CCDC46	503427,27215
chr5:60670675-60670891	chr5	+	60670705	60670921	True	NM_001048249,NM_020928	chr5,chr5	-,+	C5orf43,ZSWIM6	-212403,-42662
chr17:3539421-3539659	chr17	+	3539448	3539658	True	NM_004937,NM_001031681,NM_013276	chr17,chr17,chr17	+,+,-	CTNS,CTNS,SHPK	103,103,8
chr14:23289930-23290391	chr14	+	23289990	23290393	True	NM_181307,NM_181304,NM_003982,NM_181306,NM_181305,NM_180982,NM_001126106,NM_001126105,NM_178336	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,+,-,+,+,+,-,-,+	MRPL52,MRPL52,SLC7A7,MRPL52,MRPL52,MRPL52,SLC7A7,SLC7A7,MRPL52	8698,8698,-4918,8698,8698,8698,-976,-4918,8698
chr19:30019245-30019523	chr19	+	30019328	30019568	True	NM_001031726,NM_001146339	chr19,chr19	-,+	C19orf12,VSTM2B	186445,-1896
chr8:30905283-30906581	chr8	+	30905359	30906518	True	NM_000553,NM_001015508	chr8,chr8	+,-	WRN,PURG	-14640,-14128
chr7:33073796-33074964	chr7	+	33073901	33074774	True	NM_016489,NM_001166118,NM_007270	chr7,chr7,chr7	-,-,+	NT5C3,NT5C3,FKBP9	5806,5805,-76947
chr3:126705517-126705850	chr3	+	126705524	126705836	True	NM_032242,NM_052883	chr3,chr3	+,-	PLXNA1,TXNRD3	1600,-331557
chr1:29509214-29510549	chr1	+	29509490	29510248	True	NM_005626,NM_001195001	chr1,chr1	-,+	SRSF4,PTPRU	-853,52779
chr12:6485032-6485441	chr12	+	6485051	6485387	True	NM_001159576,NM_002342,NM_001159575,NM_001038	chr12,chr12,chr12,chr12	-,+,-,-	SCNN1A,LTBR,SCNN1A,SCNN1A	-661,7969,1186,-146
chr2:188342272-188343207	chr2	+	188342308	188343245	True	NM_005795,NM_177454	chr2,chr2	-,+	CALCRL,FAM171B	-29287,-783578
chr1:202777470-202779135	chr1	+	202777845	202779026	True	NM_006618,NR_002929	chr1,chr1	-,+	KDM5B,LOC148709	-296,51855
chr3:69970316-69971086	chr3	+	69970353	69971099	True	NM_001184968,NM_015123	chr3,chr3	+,-	MITF,FRMD4B	14651,-534923
chr1:115252502-115253938	chr1	+	115253309	115253887	True	NM_003176,NM_002524	chr1,chr1	+,-	SYCP1,NRAS	143567,5678
chr20:62372320-62372545	chr20	+	62372351	62372581	True	NM_020062,NM_003224,NM_017806	chr20,chr20,chr20	+,-,+	SLC2A4RG,ARFRP1,LIME1	-1191,-32996,-4424
chr11:119070771-119071694	chr11	+	119070857	119071183	True	NM_001145018,NM_005188	chr11,chr11	-,+	CCDC153,CBL	-4273,5806
chr11:123613329-123614843	chr11	+	123613510	123614691	True	NM_003455,NM_001005197	chr11,chr11	-,+	ZNF202,OR8D4	-1147,162447
chr1:106621174-106621850	chr1	+	106621174	106621571	True	NM_018137,NM_001079874	chr1,chr1	+,-	PRMT6,VAV3	977695,1609620
chr11:62356652-62357034	chr11	+	62356671	62356840	True	NM_022830,NM_000327	chr11,chr11	-,+	TUT1,ROM1	2320,23372
chr16:69170546-69172231	chr16	+	69170669	69171993	True	NM_001039690,NR_033227,NM_001040146,NM_032830	chr16,chr16,chr16,chr16	-,-,-,+	CHTF8,CHTF8,CHTF8,CIRH1A	-4176,-4176,-4607,-4226
chr14:54422923-54423346	chr14	+	54423035	54423305	True	NM_130850,NM_001202,NM_130851,NM_001130851	chr14,chr14,chr14,chr14	-,-,-,+	BMP4,BMP4,BMP4,CDKN3	299,299,-1765,440367
chr12:4135230-4136113	chr12	+	4135335	4136135	True	NM_001759,NM_020367	chr12,chr12	+,-	CCND2,PARP11	246766,-152727
chr17:7760980-7761308	chr17	+	7760980	7761336	True	NM_032356,NM_144607,NM_203411	chr17,chr17,chr17	-,+,+	LSMD1,CYB5D1,TMEM88	-6,33,-2647
chr14:55517363-55517713	chr14	+	55517479	55517601	True	NM_007086,NM_144578	chr14,chr14	-,+	WDHD1,MAPK1IP1L	-23660,760
chr9:101470274-101470594	chr9	+	101470280	101470548	True	NM_024642,NM_005458	chr9,chr9	+,-	GALNT12,GABBR2	99432,981
chr1:14692868-14693446	chr1	+	14692868	14693446	True	NM_015209,NR_027136	chr1,chr1	+,-	KAZN,C1orf126	231766,785564
chr5:77659192-77660086	chr5	+	77659499	77660097	True	NM_003664,NM_004866	chr5,chr5	-,+	AP3B1,SCAMP1	-68971,-3223
chr12:49933310-49933537	chr12	+	49933516	49933578	True	NM_012284,NM_001012300	chr12,chr12	+,-	KCNH3,MCRS1	-627,26694
chr6:11234495-11235959	chr6	+	11234576	11235948	True	NM_001135575,NM_182966,NM_006403	chr6,chr6,chr6	+,-,-	LOC221710,NEDD9,NEDD9	-140361,-1661,-1661
chr11:131782046-131783513	chr11	+	131782198	131783471	True	NM_014758,NM_016522,NM_001144059,NM_001144058	chr11,chr11,chr11,chr11	-,+,+,+	SNX19,NTM,NTM,NTM	-995816,-1537,-1537,-1537
chr5:176836693-176837036	chr5	+	176836748	176836932	True	NM_001029886,NM_000505,NM_001004105	chr5,chr5,chr5	-,-,+	PFN3,F12,GRK6	-9111,-171,16754
chr12:42981964-42982861	chr12	+	42981975	42982892	True	NM_016488,NM_153026	chr12,chr12	+,-	PPHLN1,PRICKLE1	-262079,730
chr19:10674025-10674713	chr19	+	10674464	10674527	True	NM_023008,NM_079421,NR_031603,NM_001800	chr19,chr19,chr19,chr19	-,-,+,-	KRI1,CDKN2D,MIR1238,CDKN2D	2226,5179,-11717,5155
chr19:47976086-47976893	chr19	+	47976240	47976867	True	NM_014681,NM_015063	chr19,chr19	+,-	DHX34,SLC8A2	-123753,-933
chr17:72706208-72707219	chr17	+	72706401	72706667	True	NM_001163989,NM_139018	chr17,chr17	+,-	RAB37,CD300LF	26291,2496
chr16:1583467-1583747	chr16	+	1583586	1583660	True	NM_001013658,NM_024600	chr16,chr16	-,+	PTX4,TMEM204	-45118,570
chr12:121405694-121407566	chr12	+	121406435	121407269	True	NR_024345,NM_000545	chr12,chr12	-,+	NCRNA00262,HNF1A	2888,9279
chr12:110174277-110174621	chr12	+	110174294	110174594	True	NM_032829,NR_026661	chr12,chr12	+,-	C12orf34,MGC14436	-22158,36745
chr10:95243049-95244012	chr10	+	95243327	95243849	True	NM_001127182,NM_013451,NM_133337	chr10,chr10,chr10	+,-,-	CEP55,MYOF,MYOF	12519,-1253,-1253
chr16:74453351-74453845	chr16	+	74453366	74453832	True	NM_001011880,NM_002811	chr16,chr16	-,+	CLEC18B,PSMD7	1586,-122745
chr16:74453351-74453845	chr16	-	70209507	70209973	False	NR_033959,NM_173619	chr16,chr16	-,+	LOC729513,CLEC18C	50014,-1630
chr1:247618649-247619146	chr1	+	247618669	247619182	True	NM_001004492,NM_001004698	chr1,chr1	-,+	OR2B11,OR2W5	-3385,35187
chr19:58873681-58873889	chr19	+	58873705	58873877	True	NM_130786,NM_198458,NR_015380	chr19,chr19,chr19	-,-,+	A1BG,ZNF497,A1BG-AS1	-8840,293,-10420
chr1:92946808-92947557	chr1	+	92946858	92947409	True	NM_001127216,NM_001127215,NM_024813,NM_005263	chr1,chr1,chr1,chr1	-,-,+,-	GFI1,GFI1,RPAP2,GFI1	4270,1998,-182387,5075
chr12:88535306-88535734	chr12	+	88535305	88535671	True	NM_025114,NM_181783	chr12,chr12	-,+	CEP290,TMTC3	372,401
chr7:83802797-83803286	chr7	+	83802945	83803011	True	NM_006080,NM_000840	chr7,chr7	-,+	SEMA3A,GRM3	21256,2470218
chr19:50356199-50356776	chr19	+	50356204	50356607	True	NM_017432,NM_007254	chr19,chr19	+,-	PTOV1,PNKP	-1839,14265
chr20:61848187-61848528	chr20	+	61848229	61848559	True	NM_022161,NM_017798	chr20,chr20	+,-	BIRC7,YTHDF1	18716,-691
chr10:917598-917859	chr10	+	917635	917873	True	NM_015155,NM_012341	chr10,chr10	-,+	LARP4B,GTPBP4	13879,116475
chrX:69397908-69399279	chrX	+	69398082	69399100	True	NM_002565,NM_198512	chrX,chrX	-,+	P2RY4,DGAT2L6	80616,-797
chrY:26193283-26194547	chrY	+	26193500	26194064	True	NM_004680,NM_001003895,NM_001003894,NR_001526,NM_170723	chrY,chrY,chrY,chrY,chrY	-,-,-,+,-	CDY1,CDY1B,CDY1B,TTTY17A,CDY1	147,147,147,437414,147
chrY:26193283-26194547	chrY	-	27768360	27768922	False	NM_004680,NR_002179,NM_001003895,NM_001003894,NM_170723	chrY,chrY,chrY,chrY,chrY	+,-,+,+,+	CDY1,TTTY17C,CDY1B,CDY1B,CDY1	-147,-437440,-147,-147,-147
chr16:68298519-68298724	chr16	+	68298531	68298723	True	NM_003983,NM_001076785,NM_024939	chr16,chr16,chr16	+,+,-	SLC7A6,SLC7A6,ESRP2	-159,-159,-28395
chr16:68676891-68677264	chr16	+	68676896	68677056	True	NM_018667,NM_001793	chr16,chr16	-,+	SMPD3,CDH3	-194487,1094
chr17:78231827-78232637	chr17	+	78231922	78232658	True	NM_000199,NM_020914,NM_020954	chr17,chr17,chr17	-,+,+	SGSH,RNF213,RNF213	-37723,2008,2008
chr6:33093680-33095301	chr6_qbl_hap6	+	4326336	4326390	False	NM_033554,NR_001435	chr6_qbl_hap6,chr6_qbl_hap6	-,+	HLA-DPA1,HLA-DPB2	-52507,-13641
chr6:33093680-33095301	chr6	+	33094161	33094459	True	NM_033554,NR_001435	chr6,chr6	-,+	HLA-DPA1,HLA-DPB2	-52783,-13921
chr6:33093680-33095301	chr6_mann_hap4	+	4551429	4551483	False	NM_033554,NR_001435	chr6_mann_hap4,chr6_mann_hap4	-,+	HLA-DPA1,HLA-DPB2	-52511,-13641
chr6:33093680-33095301	chr6_apd_hap1	+	4380921	4381219	False	NM_033554,NR_001435	chr6_apd_hap1,chr6_apd_hap1	-,+	HLA-DPA1,HLA-DPB2	-52742,-13917
chr6:33093680-33095301	chr6_cox_hap2	+	4537952	4538006	False	NM_033554,NR_001435	chr6_cox_hap2,chr6_cox_hap2	-,+	HLA-DPA1,HLA-DPB2	-52394,-13612
chr5:69711822-69712243	chr5	+	69712020	69712230	True	NR_033417,NR_033968	chr5,chr5	+,-	GTF2H2B,LOC100049076	-874,138970
chr5:69711822-69712243	chr5	+	68856985	68857059	False	NR_027439,NM_001042490,NM_001098728	chr5,chr5,chr5	-,+,+	LOC100272216,GTF2H2D,GTF2H2C	72019,-968,-991
chr5:69711822-69712243	chr5	-	70362467	70362677	False	NM_022877,NM_001515	chr5,chr5	+,-	SMN2,GTF2H2	-141750,870
chr20:57463263-57463706	chr20	+	57463289	57463595	True	NM_001077489,NM_001077488,NM_000516,NR_002785,NR_003259,NM_080426	chr20,chr20,chr20,chr20,chr20,chr20	+,+,+,-,+,+	GNAS,GNAS,GNAS,GNAS-AS1,GNAS,GNAS	2830,2830,2830,-37331,584,2830
chr3:44307428-44308945	chr3	+	44307520	44308638	True	NM_181489,NM_001145030	chr3,chr3	-,+	ZNF445,C3orf77	210585,-24195
chr6:131600454-131602424	chr6	+	131600910	131602470	True	NM_001431,NM_138633	chr6,chr6	-,+	EPB41L2,AKAP7	-216448,-29457
chr6:152478423-152479517	chr6	+	152478569	152479550	True	NM_000125,NM_133650	chr6,chr6	+,-	ESR1,SYNE1	-349815,21107
chr17:76251541-76252170	chr17	+	76251709	76252175	True	NR_002219,NM_001204210	chr17,chr17	-,+	EPR1,TMEM235	-30926,-24369
chr1:9139457-9141291	chr1	+	9140060	9140964	True	NM_001215,NR_024180	chr1,chr1	+,-	CA6,SLC2A5	-134201,7596
chr17:41623280-41623558	chr17	+	41623353	41623503	True	NM_001079675,NM_004941,NM_001986	chr17,chr17,chr17	-,+,-	ETV4,DHX8,ETV4	309,-62070,-48
chr9:128026144-128027088	chr9	+	128026184	128026952	True	NM_005347,NM_015635	chr9,chr9	-,+	HSPA5,GAPVD1	-22518,-2124
chr1:53607265-53607563	chr1	+	53607335	53607549	True	NM_000098,NM_006671	chr1,chr1	+,-	CPT2,SLC1A7	54551,790
chr6:126112909-126113347	chr6	+	126112936	126113355	True	NM_016063,NM_001122842,NM_181782,NM_001199621	chr6,chr6,chr6,chr6	-,+,+,+	HDDC2,NCOA7,NCOA7,NCOA7	-489654,-1079,-1079,-1079
chr2:215339532-215340419	chr2	+	215339558	215340379	True	NM_000465,NM_001080500	chr2,chr2	-,+	BARD1,VWC2L	334099,-63149
chr7:89748088-89748589	chr7	+	89748222	89748290	True	NR_003551,NM_152706	chr7,chr7	+,-	DPY19L2P4,C7orf62	423,-1323191
chr1:44583258-44584629	chr1	+	44583553	44584521	True	NM_001024845,NM_173484	chr1,chr1	-,+	SLC6A9,KLF17	-86419,0
chr1:206644489-206644799	chr1	+	206644492	206644816	True	NM_001193321,NM_001193322,NM_014002,NM_001201478	chr1,chr1,chr1,chr1	+,+,+,-	IKBKE,IKBKE,IKBKE,EIF2D	-957,-957,-957,141138
chr2:65358234-65359069	chr2	+	65358244	65358821	True	NM_004161,NM_015147,NM_015543	chr2,chr2,chr2	-,+,-	RAB1A,CEP68,RAB1A	-809,-74809,-809
chr9:113021478-113023352	chr9	+	113021704	113023284	True	NM_001136562,NM_003329	chr9,chr9	+,-	AKAP2,TXN	-133975,-2926
chr11:94856439-94856957	chr11	+	94856499	94856873	True	NM_144665,NM_015036	chr11,chr11	-,+	SESN3,ENDOD1	107428,-33585
chr10:76857261-76857612	chr10	+	76857261	76857651	True	NM_016364,NM_001174156	chr10,chr10	-,+	DUSP13,SAMD8	1647,13741
chr17:26895327-26896213	chr17	+	26895642	26896192	True	NM_003593,NM_005165,NM_033198	chr17,chr17,chr17	+,-,-	FOXN1,ALDOC,PIGS	-44741,7815,2751
chr11:18724556-18724815	chr11	+	18724593	18724855	True	NM_153347,NM_173588	chr11,chr11	+,-	TMEM86A,IGSF22	-4293,22972
chr4:183246528-183247000	chr4	+	183246554	183246984	True	NM_001080477,NR_027107	chr4,chr4	+,-	ODZ3,MGC45800	-1477,-180886
chr5:180672913-180673219	chr5	+	180672936	180673267	True	NR_002592,NM_006098,NR_002591,NM_201627	chr5,chr5,chr5,chr5	-,-,-,+	SNORD96A,GNB2L1,SNORD95,TRIM41	-4047,-2030,-2560,-22681
chr15:63335443-63335860	chr15	+	63335607	63335793	True	NM_001018020,NM_001018007,NM_001018004,NM_001018005,NM_001018008,NM_000366,NM_001018006,NM_015920	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,-	TPM1,TPM1,TPM1,TPM1,TPM1,TPM1,TPM1,RPS27L	-820,-820,-820,-820,4842,-820,-820,113998
chr19:7073756-7074078	chr19	+	7073802	7073964	True	NM_001044388,NM_024341,NM_001164425,NM_001044387	chr19,chr19,chr19,chr19	+,+,-,+	ZNF557,ZNF557,MBD3L3,ZNF557	-4384,-4384,-15157,-4384
chr8:35094600-35095360	chr8	+	35094754	35095256	True	NM_080872,NM_024025	chr8,chr8	+,-	UNC5D,DUSP26	-1830,-1637315
chr19:34746113-34746553	chr19	+	34746185	34746578	True	NR_027620,NM_014686	chr19,chr19	-,+	LOC643719,KIAA0355	322075,-780
chr4:57527036-57528687	chr4	+	57527411	57528620	True	NM_139211,NM_001145459,NM_206919	chr4,chr4,chr4	-,-,+	HOPX,HOPX,ARL9	-4723,-4723,-156099
chr8:68255480-68255778	chr8	+	68255514	68255782	True	NM_024790,NM_006421	chr8,chr8	+,-	CSPP1,ARFGEF1	-278962,180
chr19:58359630-58361145	chr19	+	58360124	58361172	True	NM_032828,NR_024162,NM_001204817	chr19,chr19,chr19	+,-,+	ZNF587,FKBP1AP1,ZNF587	8,-21294,8
chr10:126433210-126433917	chr10	+	126433214	126433957	True	NM_032182,NM_014661	chr10,chr10	+,-	FAM175B,FAM53B	56396,-284
chr14:67877650-67878601	chr14	+	67877934	67878405	True	NM_016445,NM_004094	chr14,chr14	-,+	PLEK2,EIF2S1	484,-50951
chr21:28339176-28339617	chr21	+	28339388	28339612	True	NR_024357,NM_007038	chr21,chr21	+,-	NCRNA00113,ADAMTS5	755085,9
chr12:119421882-119423400	chr12	+	119422203	119423439	True	NR_024246,NM_194286	chr12,chr12	-,+	LOC144742,SRRM4	317804,-2954
chr2:42586748-42587907	chr2	+	42586825	42587905	True	NM_019063,NM_004718	chr2,chr2	+,-	EML4,COX7A2L	-190389,501
chr19:39369926-39370256	chr19	+	39369930	39370166	True	NM_198445,NM_001001716,NM_001195833	chr19,chr19,chr19	-,+,-	RINL,NFKBIB,RINL	-1011,20448,-1011
chr2:33171328-33171712	chr2	+	33171327	33171563	True	NM_206943,NM_015475	chr2,chr2	+,-	LTBP1,FAM98A	805,652849
chr20:50177569-50178798	chr20	+	50177712	50178793	True	NM_014484,NM_001136021	chr20,chr20	+,-	MOCS3,NFATC2	-602400,425
chr14:79745611-79745886	chr14	+	79745647	79745707	True	NM_001007023,NM_001105250,NM_138970	chr14,chr14,chr14	-,+,+	DIO2,NRXN3,NRXN3	932186,-44,-44
chr1:1140789-1141259	chr1	+	1140794	1141052	True	NM_004195,NM_148901,NM_148902,NM_003327,NM_153254	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	TNFRSF18,TNFRSF18,TNFRSF18,TNFRSF4,TTLL10	1087,1087,1087,8546,-25768
chr5:32711424-32711645	chr5	+	32711428	32711574	True	NM_001204376,NM_000908,NM_001204375,NM_016107	chr5,chr5,chr5,chr5	+,+,+,-	NPR3,NPR3,NPR3,ZFR	-736,-41,-41,-266584
chr13:96098352-96099490	chr13	+	96098358	96099505	True	NM_001105515,NM_182848	chr13,chr13	-,+	ABCC4,CLDN10	-144671,-12556
chr19:56265519-56265945	chr19	+	56265518	56265924	True	NM_001145014,NM_176820	chr19,chr19	+,-	RFPL4A,NLRP9	4582,-15750
chr14:100271185-100272575	chr14	+	100271293	100272601	True	NM_004434,NM_001144995	chr14,chr14	+,-	EML1,CCDC85C	-11599,-200566
chr20:57584387-57585486	chr20	+	57584481	57585310	True	NM_001336,NM_030773	chr20,chr20	-,+	CTSZ,TUBB1	-2172,8998
chrX:150905382-150905631	chrX	+	150905387	150905587	True	NR_029973,NM_005140	chrX,chrX	-,+	MIR452,CNGA2	222647,-2220
chr11:61121967-61122431	chr11	+	61122193	61122305	True	NM_153611,NM_016464,NM_001161452,NM_001161454,NR_028473	chr11,chr11,chr11,chr11,chr11	-,+,-,-,+	CYBASC3,TMEM138,CYBASC3,CYBASC3,TMEM138	7500,7167,2106,7500,7167
chr15:25307362-25308829	chr15	+	25307389	25308817	True	NR_003322,NR_003317,NR_003320,NR_003321,NR_003324,NR_003323,NR_003319,NR_003318,NM_130838	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,-	SNORD116-7,SNORD116-2,SNORD116-5,SNORD116-6,SNORD116-9,SNORD116-8,SNORD116-4,SNORD116-3,UBE3A	39,1354,39,1354,-5434,6760,-2756,-5434,341886
chr19:35084839-35085065	chr19	+	35084865	35085059	True	NM_001025591,NM_001012320	chr19,chr19	-,+	SCGBL,ZNF302	481,83507
chr2:191519597-191520479	chr2	+	191519718	191520498	True	NM_005966,NM_001142645	chr2,chr2	+,-	NAB1,TMEM194B	-5928,-120250
chr2:219156540-219156976	chr2	+	219156546	219156902	True	NM_015488,NM_022152	chr2,chr2	+,-	PNKD,TMBIM1	-21482,428
chr1:155179136-155179944	chr1	+	155179246	155179956	True	NM_002455,NM_007112,NM_198883	chr1,chr1,chr1	+,-,+	MTX1,THBS3,MTX1	-807,-1556,-807
chr9:72288700-72288936	chr9	+	72288702	72288804	True	NM_001163,NM_001010940	chr9,chr9	-,+	APBA1,C9orf135	-1427,146926
chrX:134044697-134044951	chrX	+	134044712	134044910	True	NM_019556,NM_001163438	chrX,chrX	-,+	MOSPD1,LOC644538	4437,80057
chr14:39887545-39887901	chr14	+	39887557	39887680	True	NM_203355,NM_203301	chr14,chr14	+,-	CTAGE5,FBXO33	-151288,14077
chr11:113259122-113259329	chr11	+	113259124	113259368	True	NM_178510,NR_036183	chr11,chr11	+,-	ANKK1,MIR4301	-662,61492
chr1:100123714-100124047	chr1	+	100123887	100123963	True	NM_017734,NR_030382	chr1,chr1	+,-	PALMD,MIR548D1	-12514,54606
chr17:76211352-76212006	chr17	+	76211584	76211962	True	NM_001168,NR_002219,NM_001012271,NM_001012270	chr17,chr17,chr17,chr17	+,-,+,+	BIRC5,EPR1,BIRC5,BIRC5	-1369,8871,-1369,-1369
chr19:6738428-6738828	chr19	+	6738505	6738637	True	NM_004240,NM_001080452	chr19,chr19	+,-	TRIP10,GPR108	1069,-872
chr14:38064076-38064306	chr14	+	38064099	38064177	True	NM_138731,NM_004496	chr14,chr14	+,-	MIPOL1,FOXA1	-397032,362
chr17:7943283-7943785	chr17	+	7943400	7943566	True	NM_001141,NM_001139,NM_001039131,NM_001039130	chr17,chr17,chr17,chr17	+,-,+,+	ALOX15B,ALOX12B,ALOX15B,ALOX15B	-1093,47505,-1093,-1093
chr19:35760980-35761385	chr19	+	35761122	35761236	True	NM_003367,NM_207291,NM_152481	chr19,chr19,chr19	+,+,-	USF2,USF2,FAM187B	-1278,-1278,-41494
chr16:88217849-88218155	chr16	+	88217941	88218115	True	NM_001173543,NM_001739	chr16,chr16	+,-	BANP,CA5A	-214368,-247829
chr16:88217849-88218155	chr16	+	29229740	29229914	False	NR_002939,NM_001031827	chr16,chr16	+,-	RUNDC2C,BOLA2	72626,236421
chr14:24785857-24786421	chr14	+	24785891	24786385	True	NM_001164692,NM_019839,NM_181657,NM_001143919,NM_014430	chr14,chr14,chr14,chr14,chr14	+,+,+,+,-	LTB4R2,LTB4R2,LTB4R,LTB4R,CIDEB	-6585,-6585,-3629,-5237,-5315
chr19:37666375-37667050	chr19	+	37666783	37666987	True	NM_152655,NM_152604,NM_199126	chr19,chr19,chr19	-,+,-	ZNF585A,ZNF383,ZNF585A	-3168,50378,-3450
chrY:1405263-1405985	chrY	+	1405331	1406021	True	NM_001636,NM_002183	chrY,chrY	-,+	SLC25A6,IL3RA	55068,-29
chrY:1405263-1405985	chrX	+	1455331	1456021	False	NM_001636,NM_002183	chrX,chrX	-,+	SLC25A6,IL3RA	55068,-29
chr6:75949739-75950911	chr6	+	75949826	75950919	True	NR_029466,NM_001100409,NM_001865	chr6,chr6,chr6	-,+,-	COX7A2,SENP6,COX7A2	2779,360702,2779
chr16:27559879-27560194	chr16	+	27559923	27560199	True	NM_015202,NM_001520	chr16,chr16	+,-	KIAA0556,GTF3C1	1268,1102
chr11:119075775-119076307	chr11	+	119075777	119076353	True	NM_001145018,NM_005188	chr11,chr11	-,+	CCDC153,CBL	-9193,636
chr1:147483646-147483981	chr1	+	147483721	147484015	True	NR_003377,NM_001097616	chr1,chr1	-,+	PDZK1P1,GPR89C	366,-58205
chr1:147483646-147483981	chr1	+	145942009	145942303	False	NR_003377,NM_001097616	chr1,chr1	-,+	PDZK1P1,GPR89C	366,-58192
chr15:40987309-40987690	chr15	+	40987332	40987714	True	NM_133487,NM_018145,NM_001164269,NM_001164270,NM_002875	chr15,chr15,chr15,chr15,chr15	+,-,+,+,+	RAD51,FAM82A2,RAD51,RAD51,RAD51	-56,59794,-5,-56,-56
chr3:46757408-46758663	chr3	+	46757463	46758455	True	NM_013270,NM_147196	chr3,chr3	-,+	PRSS50,TMIE	968,-14691
chr10:38299870-38300079	chr10	+	38299874	38300128	True	NM_006974,NM_145011,NM_006954	chr10,chr10,chr10	+,-,+	ZNF33A,ZNF25,ZNF33A	-347,-34421,-347
chr19:36002252-36003058	chr19	+	36002285	36002795	True	NM_001035516,NM_001190348,NM_001126059,NM_001126058,NM_001126057,NM_001190347,NM_001190349,NM_001126056,NR_033746,NM_014364,NM_033317	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,-,-,+,-	DMKN,DMKN,DMKN,DMKN,DMKN,DMKN,DMKN,DMKN,DMKN,GAPDHS,DMKN	-9472,1815,-894,1815,1815,1815,1815,1815,-873,21518,1815
chr14:105220155-105220595	chr14	+	105220219	105220595	True	NM_005163,NM_021709,NM_006427	chr14,chr14,chr14	-,+,+	AKT1,SIVA1,SIVA1	39393,-800,-800
chr5:76009136-76010442	chr5	+	76009270	76010453	True	NR_028375,NM_001992,NM_004101	chr5,chr5,chr5	+,+,-	NCRUPAR,F2R,F2RL2	-1563,1414,-90030
chr6:14961622-14962285	chr6	+	14961648	14962334	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	284192,701011
chr2:28114486-28115006	chr2	+	28114488	28115028	True	NM_004899,NM_199191,NM_199192,NM_199193,NM_199194,NM_022128,NR_028308	chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,+,-,-	BRE,BRE,BRE,BRE,BRE,RBKS,LOC100302650	-983,-983,-983,-1058,-1058,-1265,-507
chr19:6719829-6721739	chr19	+	6719840	6721330	True	NM_004240,NM_000064	chr19,chr19	+,-	TRIP10,C3	18376,-252
chr20:42087908-42089235	chr20	+	42087978	42089261	True	NR_034009,NM_001008901,NM_006275	chr20,chr20,chr20	+,-,+	SRSF6,GTSF1L,SRSF6	-1526,266432,-1526
chr2:227705058-227705929	chr2	+	227705092	227705803	True	NM_001167608,NM_032276,NM_005544	chr2,chr2,chr2	+,+,-	RHBDD1,RHBDD1,IRS1	-4485,-4485,-41586
chr1:861387-861609	chr1	+	861433	861493	True	NM_152486,NR_026874	chr1,chr1	+,-	SAMD11,FLJ39609	-363,-6616
chr8:15397018-15397643	chr8	+	15397219	15397599	True	NM_139167,NM_178234,NM_006765	chr8,chr8,chr8	-,+,+	SGCZ,TUSC3,TUSC3	-301427,-4,-4
chr17:71088866-71090167	chr17	+	71088881	71089739	True	NM_001159770,NM_139177,NM_001050	chr17,chr17,chr17	-,-,+	SLC39A11,SLC39A11,SSTR2	-28,-28,71420
chr6:100912114-100912399	chr6	+	100912180	100912306	True	NM_021620,NM_005068	chr6,chr6	+,-	PRDM13,SIM1	-857581,-629
chr8:492785-494074	chr8	+	492909	494059	True	NM_175075,NM_183421	chr8,chr8	-,+	C8orf42,FBXO25	1330,-136152
chr3:69064099-69064852	chr3	+	69064122	69064762	True	NM_006407,NM_173654	chr3,chr3	+,-	ARL6IP5,C3orf64	69327,-1348
chr6:122961883-122963842	chr6	+	122961883	122963861	True	NM_020755,NM_181795	chr6,chr6	-,+	SERINC1,PKIB	-168931,-30557
chr1:45793566-45794040	chr1	+	45793752	45794036	True	NM_001048174,NM_032756	chr1,chr1	-,+	MUTYH,HPDL	11643,-1258
chrX:118693731-118694307	chrX	+	118694104	118694266	True	NM_001170569,NM_003336,NM_001170570,NM_022101	chrX,chrX,chrX,chrX	-,+,-,-	CXorf56,UBE2A,CXorf56,CXorf56	5156,14232,5181,5181
chr11:64057581-64058548	chr11	+	64057838	64058342	True	NM_001039496,NM_020155,NM_001177358,NM_001170880,NM_004322,NM_001170881,NM_001170726,NM_033310,NM_032989	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,-,+,+,+,-	C11orf20,GPR137,GPR137,GPR137,BAD,GPR137,GPR137,KCNK4,BAD	9520,-4307,-5606,-4307,-5662,-5604,-6078,450,-5662
chr3:186542903-186543136	chr3	+	186542932	186543114	True	NM_181573,NM_001177800	chr3,chr3	-,+	RFC4,ADIPOQ	-18448,17348
chr6:2244187-2245067	chr6	+	2244427	2244937	True	NM_001500,NM_020135	chr6,chr6	-,+	GMDS,WRNIP1	959,520728
chr17:7082146-7082353	chr17	+	7082324	7082402	True	NM_001671,NM_000018,NM_001197216	chr17,chr17,chr17	-,+,-	ASGR1,ACADVL,ASGR1	531,40750,531
chr19:51962988-51964925	chr19	+	51963546	51964802	True	NM_001080405,NM_014442	chr19,chr19	+,-	CEACAM18,SIGLEC8	15035,-1838
chr12:53599060-53599771	chr12	+	53599286	53599800	True	NM_001004304,NM_000889	chr12,chr12	+,-	ZNF740,ITGB7	-24805,1250
chr1:1508677-1509360	chr1	+	1509049	1509378	True	NM_001170686,NM_014188	chr1,chr1	+,-	MIB2,SSU72	41416,934
chr20:656601-657265	chr20	+	656686	657295	True	NM_033129,NM_001042353	chr20,chr20	-,+	SCRT2,FAM110A	-25,157060
chr8:144241860-144242081	chr8	+	144242006	144242072	True	NM_178172,NM_001135655,NM_002347,NM_001130478	chr8,chr8,chr8,chr8	+,-,-,-	GPIHBP1,LY6H,LY6H,LY6H	52995,-251,-549,31
chr11:117694005-117694281	chr11	+	117694019	117694229	True	NM_001680,NM_001558,NM_021603	chr11,chr11,chr11	-,+,-	FXYD2,IL10RA,FXYD2	1280,162876,4628
chr11:71636780-71637869	chr11	+	71636988	71637560	True	NR_024147,NR_029192,NR_024148,NM_018320	chr11,chr11,chr11,chr11	+,-,+,+	RNF121,LOC100133315,RNF121,RNF121	2207,1987,2207,2207
chrX:140982461-140983246	chrX	+	140982480	140983213	True	NM_005462,NM_145665,NM_177456	chrX,chrX,chrX	+,-,+	MAGEC1,SPANXE,MAGEC3	8428,-195825,-79
chr12:120964676-120965506	chr12	+	120965294	120965452	True	NM_014868,NM_032314	chr12,chr12	+,-	RNF10,COQ5	6679,1570
chr17:73520532-73520999	chr17	+	73520548	73520998	True	NM_001031803,NM_207346,NM_020753,NM_001015002,NM_004524	chr17,chr17,chr17,chr17,chr17	+,+,-,+,+	LLGL2,TSEN54,CASKIN2,LLGL2,LLGL2	784,-7990,-8921,784,784
chr12:5402731-5403458	chr12	+	5402835	5403381	True	NM_006422,NM_001102654	chr12,chr12	-,+	AKAP3,NTF3	-648492,137898
chr11:86752472-86754156	chr11	+	86752505	86753876	True	NR_033149,NM_012193,NM_022918,NM_001168724	chr11,chr11,chr11,chr11	+,-,+,+	TMEM135,FZD4,TMEM135,TMEM135	-3670,-86072,-3670,-3670
chr1:160040646-160041269	chr1	+	160040683	160041260	True	NM_002241,NM_004983	chr1,chr1	-,+	KCNJ10,KCNJ9	-632,10099
chr17:62221291-62222085	chr17	+	62221620	62221922	True	NR_004380,NM_001433,NR_002995	chr17,chr17,chr17	+,-,+	SNORD104,ERN1,SNORA76	1515,-14118,1776
chr2:168047668-168047978	chr2	+	168047744	168048028	True	NM_002976,NM_001199145,NM_001199144	chr2,chr2,chr2	-,+,+	SCN7A,XIRP2,XIRP2	-704266,-4009,-4009
chr7:148579479-148580517	chr7	+	148579523	148580478	True	NM_152998,NM_003592,NM_004456,NM_001203247,NM_001203248,NM_001203249	chr7,chr7,chr7,chr7,chr7,chr7	-,+,-,-,-,-	EZH2,CUL1,EZH2,EZH2,EZH2,EZH2	1013,-183650,1013,1013,1013,173
chr9:131038265-131038515	chr9	+	131038274	131038564	True	NM_004486,NM_001040011	chr9,chr9	-,+	GOLGA2,C9orf119	-6,12
chr2:27358448-27358682	chr2	+	27358500	27358722	True	NM_032604,NM_178553,NM_013388	chr2,chr2,chr2	+,-,-	ABHD1,C2orf53,PREB	-11894,3660,-958
chr19:4668946-4669484	chr19	+	4669047	4669213	True	NM_001167942,NM_019107	chr19,chr19	+,-	TNFAIP8L1,C19orf10	-29070,1252
chr13:96206113-96206404	chr13	+	96206125	96206453	True	NM_006984,NM_014934	chr13,chr13	+,-	CLDN10,DZIP1	-1229,90554
chr8:101120210-101120782	chr8	+	101120314	101120681	True	NM_015668,NM_005034	chr8,chr8	-,+	RGS22,POLR2K	-1970,42157
chr1:32688037-32688253	chr1	+	32688141	32688217	True	NM_003757,NM_019118	chr1,chr1	+,-	EIF3I,TMEM234	-221,-215
chr8:62628188-62628940	chr8	+	62628206	62628707	True	NM_004318,NM_001164756,NM_001164754,NM_001164755,NM_173519,NM_032466	chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,+,-	ASPH,ASPH,ASPH,ASPH,CLVS1,ASPH	-1007,-1007,-1007,-1007,-427732,-1007
chr1:55180708-55181020	chr1	+	55180815	55181041	True	NM_004623,NM_152268	chr1,chr1	+,-	TTC4,PARS2	453,49235
chr10:101993022-101994937	chr10	+	101993233	101994954	True	NM_005063,NR_002954,NM_001278	chr10,chr10,chr10	+,-,-	SCD,SNORA12,CHUK	111817,2156,-3889
chr1:99472429-99473889	chr1	+	99472472	99473908	True	NM_001010861,NM_001037317,NR_033940	chr1,chr1,chr1	-,-,+	LPPR5,LPPR5,LOC100129620	-2023,-2023,-2691
chr14:52231578-52232258	chr14	+	52231924	52232152	True	NR_037676,NM_053064	chr14,chr14	-,+	C14orf82,GNG2	-113462,94897
chr10:102789917-102790523	chr10	+	102789926	102790506	True	NM_001195263,NM_024895,NM_030971	chr10,chr10,chr10	-,-,+	PDZD7,PDZD7,SFXN3	458,458,489
chr12:50477985-50478478	chr12	+	50478467	50478527	True	NM_003076,NM_139071,NM_013277	chr12,chr12,chr12	+,+,-	SMARCD1,SMARCD1,RACGAP1	455,455,-59160
chr1:201489279-201489610	chr1	+	201489286	201489658	True	NR_026667,NM_004078	chr1,chr1	+,-	RPS10P7,CSRP1	-305,-12899
chrX:152736780-152737254	chrX	+	152736780	152736962	True	NM_017518,NM_001711	chrX,chrX	-,+	HAUS7,BGN	-177,23384
chr7:140395285-140395509	chr7	+	140395292	140395400	True	NM_004546,NR_024454	chr7,chr7	+,-	NDUFB2,LOC100134713	1080,1527
chr19:13905365-13905729	chr19	+	13905392	13905760	True	NR_036515,NM_023072	chr19,chr19	-,+	LOC284454,ZSWIM4	41393,513
chr5:95193364-95194627	chr5	+	95193665	95194483	True	NR_026936,NM_002064	chr5,chr5	+,-	C5orf27,GLRX	-5780,-35088
chr12:133005176-133006894	chr12	+	133005261	133006857	True	NM_001142641,NM_001122636	chr12,chr12	+,-	FBRSL1,GALNT9	60299,-99356
chr10:35108560-35109213	chr10	+	35108576	35108938	True	NM_019619,NM_001184789,NM_001184788,NM_001184790,NM_001184791,NM_001184792,NM_001184793,NM_001184787,NM_001184786,NM_001184785,NM_001184794,NM_001881	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,-,-,-,-,-,-,-,+	PARD3,PARD3,PARD3,PARD3,PARD3,PARD3,PARD3,PARD3,PARD3,PARD3,PARD3,CREM	-4323,-4323,-4323,-4323,-4323,-4323,-4323,-4323,-4323,-4323,-4323,306862
chr4:53578942-53579193	chr4	+	53578992	53579146	True	NR_024031,NM_022832,NR_003016	chr4,chr4,chr4	+,-,+	KIAA0114,USP46,SNORA26	-422,-53490,269
chr7:91889719-91890383	chr7	+	91890009	91890320	True	NM_194456,NM_019004	chr7,chr7	-,+	KRIT1,ANKIB1	-14595,-14513
chr12:45283753-45284110	chr12	+	45283765	45284143	True	NM_001025356,NM_001145107	chr12,chr12	+,-	ANO6,NELL2	325626,-13132
chr18:22019593-22020530	chr18	+	22019791	22020576	True	NM_018439,NM_080597	chr18,chr18	+,-	IMPACT,OSBPL1A	-13241,-42001
chrX:151088820-151089166	chrX	+	151088830	151089012	True	NR_029973,NM_002362,NM_001011548,NM_001011549,NM_001011550	chrX,chrX,chrX,chrX,chrX	-,+,+,+,+	MIR452,MAGEA4,MAGEA4,MAGEA4,MAGEA4	39222,-4172,-7520,-3484,-2121
chr1:149282471-149283358	chr1	+	149282723	149283233	True	NM_001024599,NR_027002	chr1,chr1	-,+	HIST2H2BF,LOC388692	116053,-3298
chr1:149282471-149283358	chr1	+	149668375	149668801	False	NM_001161334,NM_000566	chr1,chr1	-,+	HIST2H2BF,FCGR1A	115184,85448
chrX:54070684-54070939	chrX	+	54070726	54070910	True	NM_001184897,NM_001184896,NM_015107,NM_058163,NM_001184898	chrX,chrX,chrX,chrX,chrX	-,-,-,+,-	PHF8,PHF8,PHF8,TSR2,PHF8	-119,709,-119,395942,-1099
chr1:13479502-13480136	chr1	+	13479770	13479928	True	NM_001045480,NM_001099790,NM_001099850	chr1,chr1,chr1	+,-,-	PRAMEF16,PRAMEF19,PRAMEF18	15325,-2201,-2201
chr1:13479502-13480136	chr1	+	13700606	13700764	False	NM_001099790,NM_001099850,NM_001099851	chr1,chr1,chr1	-,-,+	PRAMEF19,PRAMEF18,PRAMEF17	-2201,-2201,15323
chr6:27776131-27776777	chr6	+	27776505	27776826	True	NM_003536,NM_003509,NM_003521,NM_003519,NM_021066	chr6,chr6,chr6,chr6,chr6	+,+,+,-,-	HIST1H3H,HIST1H2AI,HIST1H2BM,HIST1H2BL,HIST1H2AJ	1015,-579,5995,-796,5743
chr14:95238071-95238704	chr14	+	95238102	95238639	True	NR_015340,NM_173849	chr14,chr14	+,-	SERPINA13,GSC	-131091,-1603
chr19:44333459-44334029	chr19	+	44333601	44333883	True	NM_182573,NM_181845	chr19,chr19	-,+	LYPD5,ZNF283	-8793,-2179
chr10:98509717-98510133	chr10	+	98510111	98510181	True	NM_152309,NM_001170765	chr10,chr10	-,+	PIK3AP1,LCOR	-29832,81835
chr17:55926135-55926747	chr17	+	55926138	55926694	True	NM_016070,NM_080677	chr17,chr17	-,+	MRPS23,DYNLL2	789,234085
chr20:32701153-32701869	chr20	+	32701480	32701677	True	NM_016732,NM_003908	chr20,chr20	+,-	RALY,EIF2S2	-119802,-1395
chr17:38218383-38218720	chr17	+	38218459	38218765	True	NM_014815,NM_001079518,NM_199334,NM_001190919,NM_001190918,NM_003250	chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,+,+,+	MED24,MED24,THRA,THRA,THRA,THRA	-7570,-7570,302,-64,302,302
chr6:108880907-108881160	chr6	+	108880953	108881099	True	NM_201559,NM_152827,NM_001455	chr6,chr6,chr6	+,-,+	FOXO3,SNX3,FOXO3	10,-298489,969
chr5:64094850-64095336	chr5	+	64094903	64095111	True	NM_173829,NM_005869	chr5,chr5	-,+	SREK1IP1,CWC27	-30407,-30207
chr3:134203406-134203992	chr3	+	134203417	134203993	True	NM_025180,NM_001042400,NM_001042384,NM_015391,NM_001042383,NR_024400,NR_024401	chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,-,+,-,-	CEP63,CEP63,CEP63,ANAPC13,CEP63,ANAPC13,ANAPC13	1053,903,581,920,581,922,888
chr4:52883630-52885133	chr4	+	52883869	52884959	True	NM_145263,NM_001024611	chr4,chr4	+,-	SPATA18,LRRC66	32633,-83
chr1:115225321-115226076	chr1	+	115225538	115226084	True	NM_000036,NM_003176	chr1,chr1	-,+	AMPD1,SYCP1	12209,171370
chr2:26204360-26204632	chr2	+	26204366	26204626	True	NM_002254,NM_016131	chr2,chr2	-,+	KIF3C,RAB10	867,52102
chrX:54199974-54201395	chrX	+	54200074	54201409	True	NM_198456,NM_058163,NM_017848	chrX,chrX,chrX	-,+,-	FAM120C,TSR2,FAM120C	8355,265443,8355
chr15:57024327-57025150	chr15	+	57024362	57025168	True	NM_001002844,NM_017661,NM_001002843,NM_003205	chr15,chr15,chr15,chr15	-,-,-,+	ZNF280D,ZNF280D,ZNF280D,TCF12	669,669,669,185664
chr19:41599203-41600189	chr19	+	41599284	41600110	True	NM_030589,NM_000766	chr19,chr19	-,+	CYP2A7,CYP2A13	-210627,-4977
chr5:115176288-115177066	chr5	+	115176325	115177008	True	NM_001284,NR_033362,NR_033363,NM_004707	chr5,chr5,chr5,chr5	+,-,-,-	AP3S1,ATG12,ATG12,ATG12	610,590,590,590
chr10:71991245-71992245	chr10	+	71991336	71992129	True	NM_021129,NM_004096	chr10,chr10	-,+	PPA1,EIF4EBP2	1111,171731
chr9:115816953-115818882	chr9	+	115817124	115818762	True	NM_003408,NR_024366	chr9,chr9	-,+	ZFP37,NCRNA00256A	284,56413
chr1:100716688-100718618	chr1	+	100716818	100718605	True	NM_001130841,NM_001918	chr1,chr1	+,-	RTCD1,DBT	13108,-1409
chr14:105958184-105959016	chr14	+	105958288	105959046	True	NM_001311,NM_001519,NM_001198983,NM_001134876,NM_001134877,NM_001134875	chr14,chr14,chr14,chr14,chr14,chr14	+,-,+,+,+,+	CRIP1,BRF1,C14orf80,C14orf80,C14orf80,C14orf80	-5082,-190959,-2147,-753,-1819,-753
chr7:102191264-102192388	chr7	+	102191264	102191803	True	NM_001031618,NM_001166339,NM_001097615	chr7,chr7,chr7	+,+,-	SPDYE2,SPDYE2L,POLR2J3	18,18,21316
chr7:102191264-102192388	chr7	+	44037087	44037143	False	NM_175064,NR_003655	chr7,chr7	+,-	SPDYE1,POLR2J4	3345,21655
chr7:102191264-102192388	chr7	+	102290357	102290896	False	NM_001031618,NM_001166339,NM_001114403	chr7,chr7,chr7	+,+,-	SPDYE2,SPDYE2L,UPK3BL	18,18,-7119
chr15:52477504-52478447	chr15	+	52477521	52478397	True	NM_006578,NM_016194,NM_002748	chr15,chr15,chr15	-,-,+	GNB5,GNB5,MAPK6	-5359,5226,-166161
chr18:3381450-3383392	chr18	+	3381735	3383425	True	NM_019856,NM_174886	chr18,chr18	-,+	MYOM1,TGIF1	-161629,28646
chr8:22421198-22421806	chr8	+	22421200	22421848	True	NR_027715,NM_001018003	chr8,chr8	-,+	FLJ14107,SORBS3	77924,1330
chr19:55954223-55954497	chr19	+	55954279	55954505	True	NM_033113,NM_001145176	chr19,chr19	+,-	ZNF628,SHISA7	33193,-49
chr18:21271829-21272168	chr18	+	21271904	21272219	True	NM_001127717,NM_173505,NM_198129	chr18,chr18,chr18	+,-,+	LAMA3,ANKRD29,LAMA3	-2405,-29055,-2405
chr15:37175089-37176641	chr15	+	37175113	37176521	True	NR_024264,NM_032499	chr15,chr15	-,+	LOC145845,C15orf41	2273,-242358
chr6:137241651-137241949	chr6	+	137241784	137241948	True	NR_027994,NM_001008783	chr6,chr6	-,+	NHEG1,SLC35D3	72470,1453
chr1:161387723-161388197	chr1	+	161387867	161388049	True	NM_001136219,NM_001013625	chr1,chr1	+,-	FCGR2A,C1orf192	87155,-50203
chr16:28836249-28836838	chr16	+	28836553	28836829	True	NM_007245,NM_003321,NM_145714,NM_148416,NM_148415,NM_148414	chr16,chr16,chr16,chr16,chr16,chr16	+,-,+,+,+,+	ATXN2L,TUFM,ATXN2L,ATXN2L,ATXN2L,ATXN2L	-2202,20950,-2202,-2202,-2202,-2202
chr20:62182327-62182677	chr20	+	62182333	62182705	True	NM_024059,NM_080823	chr20,chr20	+,-	C20orf195,SRMS	1667,-3476
chr16:284477-284693	chr16	+	284508	284704	True	NM_201412,NM_018032,NM_032039	chr16,chr16,chr16	-,-,+	LUC7L,LUC7L,ITFG3	-5059,-5059,96
chr2:132553118-132553816	chr22	+	16084710	16084760	True	NR_001591,NM_001136213	chr22,chr22	+,-	psiTPTE22,POTEH	998040,203227
chr2:132553118-132553816	chr2	+	132553203	132553829	False	NM_013310,NM_214461	chr2,chr2	+,-	C2orf27A,C2orf27B	-73190,5455
chr11:8701690-8702771	chr11	+	8701721	8702638	True	NM_000990,NR_002977,NM_014818,NR_002580	chr11,chr11,chr11,chr11	+,+,-,+	RPL27A,SNORA45,TRIM66,SNORA3	1356,4347,-21338,3135
chr17:12626380-12626714	chr17	+	12626418	12626752	True	NM_001146313,NM_001165962	chr17,chr17	+,-	MYOCD,ELAC2	-2863,294679
chr2:98283228-98283986	chr2	+	98283420	98283716	True	NM_001862,NM_005735	chr2,chr2	+,-	COX5B,ACTR1B	-20950,-2859
chr6:17279251-17280549	chr6	+	17279265	17280563	True	NM_001143941,NM_001143942,NM_005124,NM_153020	chr6,chr6,chr6,chr6	+,+,-,+	RBM24,RBM24,NUP153,RBM24	1731,1245,426305,2368
chrX:107674900-107675785	chrX	+	107674938	107675767	True	NM_033641,NM_000495,NM_033380,NM_001847	chrX,chrX,chrX,chrX	-,+,+,-	COL4A6,COL4A5,COL4A5,COL4A6	5950,7386,7386,6996
chr15:78235763-78235963	chr15	+	78235887	78236011	True	NM_001101404,NR_027024	chr15,chr15	+,-	SH2D7,LOC645752	148915,-16699
chr1:39955722-39956298	chr1	+	39955761	39956289	True	NR_003929,NM_181809	chr1,chr1	-,+	PPIEL,BMP8A	69131,1028
chr18:3412711-3413125	chr18	+	3412715	3413183	True	NM_019856,NM_174886	chr18,chr18	-,+	MYOM1,TGIF1	-192609,-694
chr19:47523208-47523632	chr19	+	47523208	47523550	True	NM_002517,NM_017854	chr19,chr19	+,-	NPAS1,TMEM160	592,28382
chr1:166575091-166576555	chr1	+	166575207	166576566	True	NM_053053,NR_002925	chr1,chr1	-,+	TADA1,FMO9P	269139,-2105
chr19:17001395-17003386	chr19	+	17001522	17003416	True	NM_003950,NM_015692	chr19,chr19	+,-	F2RL3,CPAMD8	-1747,134259
chr7:100425454-100426082	chr7	+	100425512	100425873	True	NM_020246,NM_004444	chr7,chr7	+,-	SLC12A9,EPHB4	24484,-369
chrX:70443071-70443598	chrX	+	70443405	70443643	True	NM_000166,NM_001097642,NM_201599	chrX,chrX,chrX	+,+,-	GJB1,GJB1,ZMYM3	-400,-8394,30445
chr4:41618736-41619562	chr4	+	41618767	41619588	True	NM_001112720,NM_003924,NM_001112719	chr4,chr4,chr4	+,-,+	LIMCH1,PHOX2B,LIMCH1	-3908,131456,-3908
chr19:641870-642113	chr19	+	641952	642136	True	NM_005035,NM_020637	chr19,chr19	-,+	POLRMT,FGF22	-8384,-2077
chr11:89533833-89535660	chr11	+	89533967	89535669	True	NM_020358,NR_028346	chr11,chr11	-,+	TRIM49,TRIM53	6124,39495
chr11:89533833-89535660	chr11	-	49056794	49056849	False	NM_001014986,NR_027044	chr11,chr11	-,+	FOLH1,LOC440040	173428,523230
chr11:89533833-89535660	chr11	-	89770469	89772049	False	NM_001195234,NR_028346	chr11,chr11	+,-	TRIM49L2,TRIM53	-6246,-34793
chr10:46971823-46972307	chr10	+	46971920	46972340	True	NM_014696,NM_181519,NM_031912	chr10,chr10,chr10	+,-,-	GPRIN2,SYT15,SYT15	21205,-1319,-1319
chr12:88173487-88175029	chr12	+	88173519	88174612	True	NM_001009894,NR_033410	chr12,chr12	+,-	C12orf29,MKRN9P	254655,3933
chr1:11995028-11995973	chr1	+	11995027	11995493	True	NM_000302,NM_138346	chr1,chr1	+,-	PLOD1,KIAA2013	-354,-8542
chr5:156999252-157000608	chr5	+	156999331	157000478	True	NM_001145132,NM_033274	chr5,chr5	+,-	C5orf52,ADAM19	98082,2362
chr16:48268438-48269552	chr16	+	48268518	48269447	True	NM_145186,NM_033151,NM_032583,NM_031490	chr16,chr16,chr16,chr16	-,-,-,+	ABCC11,ABCC11,ABCC11,LONP2	2,-2336,2,8763
chr1:155248912-155249828	chr1	+	155248922	155249575	True	NM_003993,NM_020897	chr1,chr1	-,+	CLK2,HCN3	-5641,-1599
chr6:28186876-28187230	chr6	+	28186940	28187237	True	NR_002936,NM_001199479,NM_006299,NM_001199480	chr6,chr6,chr6,chr6	-,+,+,+	LOC222699,ZNF193,ZNF193,ZNF193	-233,5791,5791,5791
chr21:37944091-37945319	chr21	+	37944243	37945301	True	NM_001146077,NM_009586	chr21,chr21	-,+	CLDN14,SIM2	3624,126689
chr17:34136842-34137728	chr17	+	34137088	34137766	True	NM_001032278,NM_139215,NM_003487	chr17,chr17,chr17	-,+,+	MMP28,TAF15,TAF15	-14448,-653,-653
chrX:72223249-72223637	chrX	+	72223336	72223654	True	NR_026595,NM_001042506	chrX,chrX	-,+	NCRNA00246,PABPC1L2B	-59747,-35
chrX:72223249-72223637	chrX	-	72299052	72299200	False	NM_001042506,NM_001012977	chrX,chrX	+,-	PABPC1L2B,PABPC1L2A	-75751,201
chr19:52590563-52590959	chr19	+	52590807	52590924	True	NM_014225,NM_001136499	chr19,chr19	+,-	PPP2R1A,ZNF841	102130,8145
chr9:139700742-139701090	chr9	+	139700928	139701128	True	NM_024718,NM_001173989,NM_001173988,NR_024580	chr9,chr9,chr9,chr9	+,+,+,-	C9orf86,C9orf86,C9orf86,LOC100131193	1245,1245,1245,2222
chr12:102520334-102522100	chr12	+	102520854	102521878	True	NM_017915,NM_024057	chr12,chr12	+,-	C12orf48,NUP37	-6957,-8493
chrX:151936903-151937751	chrX	+	151936903	151937745	True	NM_001129826,NM_001129828,NM_005362,NM_004909,NM_001080848	chrX,chrX,chrX,chrX,chrX	+,+,-,+,+	CSAG3,CSAG3,MAGEA3,CSAG2,CSAG2	-9143,-9220,545,-9220,-9220
chrX:151936903-151937751	chrX	-	151867731	151868573	False	NM_001129826,NM_005363,NM_001129828,NM_175868,NM_004909,NM_001080848	chrX,chrX,chrX,chrX,chrX,chrX	-,+,-,+,-,-	CSAG3,MAGEA6,CSAG3,MAGEA6,CSAG2,CSAG2	9147,-537,9224,-537,9224,9224
chr17:18282473-18283880	chr17	+	18282662	18283618	True	NM_148918,NM_001145127	chr17,chr17	-,+	SHMT1,EVPLL	-15806,-1634
chr22:32665037-32665479	chr22	+	32665226	32665478	True	NM_014227,NM_006604	chr22,chr22	-,+	SLC5A4,RFPL3	-13908,85393
chr5:173991207-173991426	chr5	+	173991209	173991467	True	NM_002449,NM_000794	chr5,chr5	+,-	MSX2,DRD1	160107,879746
chr5:140515683-140516093	chr5	+	140515683	140515977	True	NM_015669,NM_031947	chr5,chr5	+,-	PCDHB5,SLC25A2	-934,167687
chr9:36574454-36574853	chr9	+	36574640	36574842	True	NM_014791,NM_194330	chr9,chr9	+,-	MELK,RNF38	-1797,-173445
chr20:35724278-35724500	chr20	+	35724380	35724482	True	NM_002895,NM_183404,NM_001135771	chr20,chr20,chr20	-,-,+	RBL1,RBL1,RPN2	-2,-2,82973
chr3:113414628-113414978	chr3	+	113414627	113414801	True	NM_001690,NM_001009899	chr3,chr3	+,-	ATP6V1A,KIAA2018	51064,742
chr14:75185217-75185639	chr14	+	75185463	75185536	True	NM_015962,NM_001039479	chr14,chr14	+,-	FCF1,KIAA0317	-5669,-5656
chrX:54561592-54562519	chrX	+	54561912	54562197	True	NM_004463,NM_019067,NM_001184819	chrX,chrX,chrX	-,+,+	FGD1,GNL3L,GNL3L	-39313,-5324,-5324
chr9:131445248-131445680	chr9	+	131445428	131445679	True	NM_052844,NM_001122821,NM_003011	chr9,chr9,chr9	-,+,+	WDR34,SET,SET	-26299,254,5829
chr2:96805865-96806805	chr2	+	96806151	96806799	True	NM_004418,NM_001037228,NM_001002036	chr2,chr2,chr2	-,+,-	DUSP2,LOC285033,ASTL	4430,99177,-1976
chr5:10572671-10574173	chr5	+	10572811	10574068	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-8427,187382
chr19:11201611-11202199	chr19	+	11201647	11201992	True	NM_001195802,NM_001195803,NM_001195800,NM_000527,NM_001195798,NM_001195799,NM_182513	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,+,-	LDLR,LDLR,LDLR,LDLR,LDLR,LDLR,SPC24	-1660,-1660,-1660,-1660,-1660,-1660,64543
chr7:99649210-99649633	chr7	+	99649223	99649562	True	NM_145914,NM_017715	chr7,chr7	+,-	ZSCAN21,ZNF3	-1857,29874
chr22:44257595-44257818	chr22	+	44257611	44257721	True	NM_025225,NM_014351	chr22,chr22	+,-	PNPLA3,SULT4A1	61897,707
chr16:19180665-19180945	chr16	+	19180672	19180966	True	NM_016524,NM_015092	chr16,chr16	+,-	SYT17,SMG1	-1085,-242946
chr7:5941037-5942601	chr7	+	5941165	5942548	True	NM_001099697,NM_015622	chr7,chr7	-,+	RSPH10B2,CCZ1	67816,-2879
chr7:5941037-5942601	chr7	-	6861934	6863015	False	NM_198097,NM_173565	chr7,chr7	-,+	C7orf28B,RSPH10B	2961,-68245
chr14:66169756-66171220	chr14	+	66169937	66171260	True	NM_178157,NR_024334	chr14,chr14	+,-	FUT8,LOC645431	-33856,-290602
chr16:75499276-75499597	chr16	+	75499339	75499627	True	NM_145254,NM_007285	chr16,chr16	-,+	TMEM170A,GABARAPL2	-755,100621
chr17:7164127-7164368	chr17	+	7164135	7164401	True	NM_015343,NM_001307,NM_203415,NM_203414,NM_203413,NM_001143775,NM_015362,NM_001185023,NM_001185022	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,+,+,-,+,-,-	CTDNEP1,CLDN7,C17orf81,C17orf81,C17orf81,CTDNEP1,C17orf81,CLDN7,CLDN7	-8876,1913,-8814,-8635,-8635,-9140,-8635,1913,2161
chr4:15006691-15007043	chr4	+	15006791	15007000	True	NM_001177384,NM_001177381,NM_001177383,NM_001177382,NM_182646,NM_001193534,NM_182485	chr4,chr4,chr4,chr4,chr4,chr4,chr4	+,+,+,+,+,-,+	CPEB2,CPEB2,CPEB2,CPEB2,CPEB2,FBXL5,CPEB2	-2544,-2544,-2544,-2544,-2544,650088,-2544
chr2:207079506-207079943	chr2	+	207079658	207079918	True	NM_001098199,NM_005279,NR_002590	chr2,chr2,chr2	-,-,+	GPR1,GPR1,SNORA41	2903,2903,-52769
chr3:112736995-112737482	chr3	+	112737005	112737505	True	NM_015412,NR_027794,NR_027796,NM_138485	chr3,chr3,chr3,chr3	-,-,-,+	C3orf17,C3orf17,C3orf17,GTPBP8	1100,1100,1100,-27269
chr19:7460559-7461455	chr19	+	7460588	7461314	True	NR_024491,NM_015318	chr19,chr19	-,+	LOC100128573,ARHGEF18	76984,-640
chr12:121409671-121410211	chr12	+	121409709	121410093	True	NR_024345,NM_000545	chr12,chr12	-,+	NCRNA00262,HNF1A	60,6455
chr11:116639994-116640695	chr11	+	116640248	116640373	True	NM_001159736,NM_032725,NM_000040	chr11,chr11,chr11	-,-,+	BUD13,BUD13,APOC3	3392,3392,60250
chr7:74507497-74507811	chr7	+	74507501	74507819	True	NM_030798,NM_001003795	chr7,chr7	-,+	WBSCR16,GTF2IRD2B	-17802,527
chr7:74507497-74507811	chr7	-	74268399	74268717	False	NM_173537,NR_027775	chr7,chr7	-,+	GTF2IRD2,PMS2P5	-558,38176
chr2:219127683-219128046	chr2	+	219127687	219128083	True	NM_015488,NM_001077191,NM_001087,NM_170699,NM_001077194,NM_001077399	chr2,chr2,chr2,chr2,chr2,chr2	+,+,-,+,+,+	PNKD,GPBAR1,AAMP,GPBAR1,GPBAR1,PNKD	7031,-2000,6860,-2000,-2000,7031
chr7:27283842-27284669	chr7	+	27284089	27284503	True	NM_001989,NM_000522	chr7,chr7	+,-	EVX1,HOXA13	-1982,-44364
chr10:6128312-6129022	chr10	+	6128397	6128967	True	NM_001145547,NM_032905,NM_000417	chr10,chr10,chr10	+,+,-	RBM17,RBM17,IL2RA	2341,1981,-24064
chr7:11860157-11860396	chr7	+	11860167	11860287	True	NM_015204,NM_001134232	chr7,chr7	-,+	THSD7A,TMEM106B	11587,390560
chr7:12443380-12443617	chr7	+	12443496	12443662	True	NM_001112706,NM_001135924	chr7,chr7	+,-	SCIN,VWDE	166540,240
chr13:27845841-27846147	chr13	+	27845944	27846174	True	NM_182488,NM_206827	chr13,chr13	-,+	USP12,RASL11A	-99911,-1531
chr10:89278009-89279701	chr10	+	89278194	89279713	True	NM_001178118,NR_024397	chr10,chr10	+,-	MINPP1,LOC728190	-10656,-175879
chr2:73500529-73501905	chr2	+	73500654	73501675	True	NR_029403,NM_001080410	chr2,chr2	+,-	CCT7,FBXO41	-39343,-3896
chr11:100557204-100557782	chr11	+	100557301	100557599	True	NM_001202474,NM_152432	chr11,chr11	-,+	PGR,ARHGAP42	442253,807
chr1:1186406-1186642	chr1	+	1186432	1186600	True	NM_080605,NM_001014980	chr1,chr1	+,-	B3GALT6,FAM132A	-18854,-4330
chr15:26107380-26107647	chr15	+	26107453	26107661	True	NM_024490,NR_001295	chr15,chr15	-,+	ATP10A,SNORD109A	738,-584014
chr9:36385534-36386673	chr9	+	36385793	36386559	True	NM_022781,NM_014791	chr9,chr9	-,+	RNF38,MELK	13789,186345
chr2:179314736-179315249	chr2	+	179314789	179315214	True	NM_001042702,NM_001139518,NM_001139517,NM_003690	chr2,chr2,chr2,chr2	+,-,-,-	DFNB59,PRKRA,PRKRA,PRKRA	948,192,321,795
chr6:91287432-91287961	chr6	+	91287476	91287896	True	NM_145331,NM_145333,NM_145332,NM_032602,NM_003188	chr6,chr6,chr6,chr6,chr6	-,-,-,+,-	MAP3K7,MAP3K7,MAP3K7,GJA10,MAP3K7	8929,9072,9072,-683339,9072
chr13:103453895-103454174	chr13	+	103453906	103454174	True	NM_001159596,NM_024089,NM_017693,NM_001204425	chr13,chr13,chr13,chr13	+,-,+,+	BIVM,KDELC1,BIVM,BIVM-ERCC5	-2566,-2502,-2566,5321
chr16:50318813-50320690	chr16	+	50318869	50320731	True	NM_001114,NM_001173984	chr16,chr16	+,-	ADCY7,BRD7	1091,82164
chr6:14911263-14911570	chr6	+	14911281	14911593	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	334933,751746
chr4:153729178-153729940	chr4	+	153729473	153729913	True	NM_014447,NM_145720	chr4,chr4	+,-	ARFIP1,TIGD4	-28423,-28557
chr12:7052124-7052388	chr12	+	7052123	7052195	True	NM_138425,NM_080548,NM_080549,NR_003010,NM_002831	chr12,chr12,chr12,chr12,chr12	+,+,+,-,+	C12orf57,PTPN6,PTPN6,SCARNA12,PTPN6	1007,3544,8238,24624,8238
chr11:60992152-60992454	chr11	+	60992303	60992467	True	NM_017966,NM_001079808	chr11,chr11	-,+	VPS37C,PGA4	-63387,-2544
chr11:60992152-60992454	chr11	+	60973588	60973638	False	NM_001079807,NM_017966	chr11,chr11	+,-	PGA3,VPS37C	-2655,-44672
chr11:60992152-60992454	chr11	+	61011129	61011293	False	NM_014224,NM_152718	chr11,chr11	+,-	PGA5,VWCE	-2547,51545
chr2:86335103-86336383	chr2	+	86335326	86336254	True	NM_015425,NM_017952	chr2,chr2	-,+	POLR1A,PTCD3	-2048,-2084
chr11:57995624-57996491	chr11	+	57995715	57996395	True	NM_001004471,NM_001004458	chr11,chr11	-,+	OR10Q1,OR1S1	45,-13549
chr12:50364950-50366469	chr12	+	50364990	50366315	True	NM_001126103,NM_001651,NM_001652	chr12,chr12,chr12	-,+,+	RACGAP1,AQP5,AQP6	53042,-9762,304
chr19:57874847-57875293	chr19	+	57874853	57875341	True	NM_173631,NR_002166,NM_020633	chr19,chr19,chr19	+,+,-	ZNF547,TRAPPC2P1,VN1R1	-13,-25,92816
chr14:73449009-73449710	chr14	+	73449021	73449496	True	NM_178441,NM_181341	chr14,chr14	-,+	ZFYVE1,DCAF4	4223,-56033
chr9:130691246-130691448	chr9	+	130691297	130691435	True	NM_001135219,NM_001018078,NM_173492,NM_003863	chr9,chr9,chr9,chr9	-,+,-,-	PIP5KL1,FPGS,PIP5KL1,DPM2	1691,-125840,-1527,9378
chr11:5014485-5016266	chr11	+	5014838	5016220	True	NM_001004755,NM_021801,NM_001004748	chr11,chr11,chr11	+,+,-	OR51L1,MMP26,OR51A2	3992,-5477,-37895
chr10:94834346-94834580	chr10	+	94834351	94834601	True	NM_013451,NM_057157,NM_000783	chr10,chr10,chr10	-,+,+	MYOF,CYP26A1,CYP26A1	407523,-1170,-755
chr1:17305477-17305724	chr1	+	17305594	17305714	True	NM_014675,NM_001135248,NM_002403,NM_017459,NM_001135247	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	CROCC,MFAP2,MFAP2,MFAP2,MFAP2	-57200,1509,1509,2417,2417
chr12:48552453-48553764	chr12	+	48552734	48553490	True	NM_024095,NM_001013635	chr12,chr12	-,+	ASB8,C12orf68	-1357,23875
chr22:21128971-21129786	chr22	+	21129216	21129829	True	NM_002650,NM_000185	chr22,chr22	-,+	PI4KA,SERPIND1	-40261,-887
chr10:88521317-88522744	chr10	+	88521477	88522545	True	NM_024756,NM_004329	chr10,chr10	-,+	MMRN2,BMPR1A	194930,-5132
chr7:57658739-57660536	chr7	+	57659416	57660333	True	NR_030766,NM_001159279	chr7,chr7	-,+	LOC642006,ZNF716	-411553,-149593
chr7:141401071-141401276	chr7	+	141401070	141401136	True	NM_001080392,NM_001105558	chr7,chr7	-,+	KIAA1147,WEE2	867,7016
chr5:696164-696483	chr5	+	696216	696498	True	NM_018140,NM_007030	chr5,chr5	+,-	CEP72,TPPP	-83862,-2706
chr5:696164-696483	chr5	+	787598	787830	False	NM_001166260,NM_024786	chr5,chr5	+,-	TRIP13,ZDHHC11	105138,63321
chr7:132940828-132941215	chr7	+	132941106	132941244	True	NM_001037126,NM_021807,NM_017812	chr7,chr7,chr7	+,+,-	EXOC4,EXOC4,CHCHD3	-3334,-3334,-174278
chr2:86669604-86669923	chr2	+	86669654	86669888	True	NM_001146688,NM_018433,NM_001164730	chr2,chr2,chr2	+,+,-	KDM3A,KDM3A,REEP1	-1125,-1438,-104448
chr1:9887955-9888186	chr1	+	9887959	9888223	True	NM_022787,NM_001009566,NM_014944	chr1,chr1,chr1	+,-,-	NMNAT1,CLSTN1,CLSTN1	115262,-3409,-3409
chr2:100107231-100107905	chr2	+	100107232	100107715	True	NM_015904,NM_001037872,NM_016316	chr2,chr2,chr2	+,-,-	EIF5B,REV1,REV1	-153449,-752,-752
chr11:67480896-67481513	chr11	+	67480943	67481559	True	NM_007103,NM_001031615	chr11,chr11	+,-	NDUFV1,ALDH3B2	-106671,-32258
chr15:78392759-78393376	chr15	+	78393058	78393362	True	NM_001101404,NM_144572	chr15,chr15	+,-	SH2D7,TBC1D2B	-8182,-23064
chr1:59006888-59007256	chr1	+	59007003	59007125	True	NR_034014,NM_145243	chr1,chr1	+,-	LOC100131060,OMA1	243697,5379
chr6:137814801-137815149	chr6	+	137814897	137815097	True	NM_006290,NM_175747	chr6,chr6	+,-	TNFAIP3,OLIG3	373483,484
chr8:88885041-88885860	chr8	+	88885218	88885860	True	NM_152418,NM_173538	chr8,chr8	-,+	DCAF4L2,CNBD1	486,-1006593
chr3:134370203-134370660	chr3	+	134370248	134370575	True	NM_178554,NM_004441	chr3,chr3	-,+	KY,EPHB1	-384,143523
chr9:133885463-133886118	chr9	+	133885808	133886076	True	NM_001145106,NM_006059	chr9,chr9	-,+	FIBCD1,LAMC3	-71353,-1355
chr1:110229649-110230044	chr1	+	110229705	110229983	True	NM_000561,NM_000849,NM_146421	chr1,chr1,chr1	+,-,+	GSTM1,GSTM3,GSTM1	434,53727,434
chr1:110229649-110230044	chr1	+	110254145	110254206	False	NM_000851,NM_000849	chr1,chr1	+,-	GSTM5,GSTM3	657,29515
chr11:60670502-60670959	chr11	+	60670691	60670951	True	NM_014502,NM_024092	chr11,chr11	-,+	PRPF19,TMEM109	3160,10419
chr19:2330837-2331174	chr19	+	2330898	2331074	True	NM_152988,NM_001077238,NM_016199	chr19,chr19,chr19	+,+,-	SPPL2B,SPPL2B,LSM7	-2320,-2320,-2284
chr19:51219089-51219613	chr19	+	51219143	51219646	True	NM_016148,NM_002975	chr19,chr19	-,+	SHANK1,CLEC11A	599,6958
chr15:90791266-90792298	chr15	+	90791507	90792306	True	NM_001029964,NM_006384	chr15,chr15	+,-	TTLL13,CIB1	457,-14228
chr22:50698032-50698469	chr22	+	50698338	50698458	True	NM_032019,NM_002969,NM_031454,NM_001159286	chr22,chr22,chr22,chr22	-,-,+,-	HDAC10,MAPK12,SELO,HDAC10	-8504,1681,-58981,-8504
chr6:7590367-7590567	chr6	+	7590429	7590587	True	NM_152551,NM_001170693	chr6,chr6	+,-	SNRNP48,CAGE1	-48,-200487
chr17:37818844-37819067	chr17	+	37818854	37819116	True	NM_002686,NM_003673,NM_033419	chr17,chr17,chr17	+,+,-	PNMT,TCAP,PGAP3	5390,2482,25244
chr10:27149654-27149874	chr10	+	27149676	27149892	True	NM_001178119,NM_005470,NM_001178116,NM_001178120,NM_001178121,NM_001178122,NM_001178123,NM_001178124,NM_001178125,NM_014317,NM_001012750,NM_001012751,NM_001012752	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,-,-,-,-,-,+,-,-,-	ABI1,ABI1,ABI1,ABI1,ABI1,ABI1,ABI1,ABI1,ABI1,PDSS1,ABI1,ABI1,ABI1	174,174,174,174,174,174,174,174,174,-163132,174,174,174
chr4:57304758-57305336	chr4	+	57305011	57305255	True	NM_001079524,NM_001079525,NM_006452,NM_002703	chr4,chr4,chr4,chr4	+,+,+,-	PAICS,PAICS,PAICS,PPAT	-2801,-2801,-3155,-3209
chr4:25565767-25566719	chr4	+	25565784	25566719	True	NM_015187,NM_001177998	chr4,chr4	-,+	SEL1L3,SLC34A2	297941,90715
chr6:114179809-114180110	chr6	+	114179817	114180143	True	NM_001527,NM_002356	chr6,chr6	-,+	HDAC2,MARCKS	112266,-1341
chr15:56038546-56040035	chr15	+	56038851	56039720	True	NM_173814,NM_001198784	chr15,chr15	-,+	PRTG,FLJ27352	-3674,-338179
chr2:160918208-160918493	chr2	+	160918398	160918504	True	NM_001195641,NM_022826,NM_007366,NM_001007267	chr2,chr2,chr2,chr2	-,+,-,-	PLA2R1,MARCH7,PLA2R1,PLA2R1	672,-349440,672,672
chr20:2450593-2450970	chr20	+	2450592	2450976	True	NR_003684,NM_003091,NM_080751,NM_198216	chr20,chr20,chr20,chr20	-,-,+,-	SNORD119,SNRPB,TMC2,SNRPB	-6899,573,66276,573
chr2:207138160-207139216	chr2	+	207138215	207139189	True	NM_020923,NM_005279	chr2,chr2	+,-	ZDBF2,GPR1	333,-55444
chrX:77396812-77398681	chrX	+	77397019	77397877	True	NM_000291,NM_015975	chrX,chrX	+,-	PGK1,TAF9B	-37410,-1840
chr15:64117295-64118256	chr15	+	64117743	64117951	True	NM_003922,NM_203373	chr15,chr15	-,+	HERC1,FBXL22	8258,-228251
chr19:46103625-46104816	chr19	+	46103743	46104619	True	NM_005282,NM_000164	chr19,chr19	-,+	GPR4,GIPR	897,66882
chr12:56111235-56111942	chr12	+	56111353	56111913	True	NM_002905,NM_002206,NM_001144996,NM_001144997,NR_037656,NR_037655,NR_037657,NM_001487,NR_037658,NM_001199771	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,-,-,-,+,+,+,+,+,+	RDH5,ITGA7,ITGA7,ITGA7,BLOC1S1,BLOC1S1,BLOC1S1,BLOC1S1,BLOC1S1-RDH5,RDH5	2237,-9667,-9667,-5264,-1328,-1586,-1328,-1586,-1586,2237
chr1:182559370-182559793	chr1	+	182559400	182559544	True	NR_036490,NM_021133	chr1,chr1	+,-	LOC284648,RNASEL	24730,-1006
chr22:36815300-36815727	chr22	+	36815393	36815745	True	NM_145343,NM_002473	chr22,chr22	+,-	APOL1,MYH9	-166329,-31330
chr9:79634251-79634542	chr9	+	79634259	79634551	True	NM_015225,NM_001013735	chr9,chr9	-,+	PRUNE2,FOXB2	-113256,19
chr17:34955274-34955764	chr17	+	34955377	34955705	True	NM_024864,NM_001033580,NM_024308	chr17,chr17,chr17	+,-,+	MRM1,MYO19,DHRS11	2319,-64072,-7202
chr11:13687072-13688127	chr11	+	13687266	13688066	True	NM_032228,NM_000315	chr11,chr11	+,-	FAR1,PTH	2139,-169699
chr3:122047269-122047903	chr3	+	122047428	122047542	True	NM_005213,NM_001017928	chr3,chr3	+,-	CSTA,CCDC58	-3468,54582
chr4:151937073-151937996	chr4	+	151937187	151937843	True	NM_006726,NM_001006,NM_001199282	chr4,chr4,chr4	-,+,-	LRBA,RPS3A,LRBA	-538,82910,-751
chr2:232373725-232374008	chr2	+	232373728	232374054	True	NR_024079,NM_152614	chr2,chr2	-,+	C2orf52,C2orf57	5046,83520
chr6:107353098-107353880	chr6	+	107353149	107353585	True	NM_001080450,NM_016487,NM_001142468,NM_001142470	chr6,chr6,chr6,chr6	-,+,+,+	BEND3,C6orf203,C6orf203,C6orf203	82101,-3793,-3793,-3793
chr21:41032713-41033129	chr21	+	41032835	41033177	True	NR_026543,NM_006057,NM_033171,NM_033170,NM_033173,NM_033172	chr21,chr21,chr21,chr21,chr21,chr21	-,+,+,+,+,+	C21orf88,B3GALT5,B3GALT5,B3GALT5,B3GALT5,B3GALT5	-48086,-3634,-3634,-3634,-3634,-3634
chr11:198641-200060	chr11	+	199004	200108	True	NM_053280,NM_145651,NM_021932,NM_016526,NM_001097610,NM_001098787	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,-,+,-	ODF3,SCGB1C1,RIC8A,BET1L,LOC653486,BET1L	-2294,-5975,8421,7364,-5975,7364
chr17:78963461-78964689	chr17	+	78963484	78964683	True	NR_026857,NM_024591	chr17,chr17	-,+	FLJ90757,CHMP6	43886,957
chr2:75062365-75062661	chr2	+	75062473	75062681	True	NM_138804,NM_000189	chr2,chr2	-,+	C2orf65,HK2	-187309,-2742
chr4:25031105-25031768	chr4	+	25031158	25031680	True	NR_037934,NM_018176	chr4,chr4	+,-	LOC285540,LGI2	130613,784
chr4:2626254-2626743	chr4	+	2626285	2626591	True	NM_003704,NM_001161527	chr4,chr4	+,-	FAM193A,TNIP2	567,131211
chr1:76081709-76081943	chr1	+	76081790	76081862	True	NM_000016,NM_001130058,NM_152697	chr1,chr1,chr1	+,-,-	ACADM,SLC44A5,SLC44A5	108180,-4991,-4991
chr1:198126886-198127734	chr1	+	198126973	198127767	True	NM_133494,NM_133262,NM_001195216	chr1,chr1,chr1	+,-,-	NEK7,ATP6V1G3,DENND1B	-916,382358,-382350
chr2:95523342-95523769	chr2	+	95523389	95523737	True	NR_003366,NM_144705	chr2,chr2	-,+	ANKRD20A8P,TEKT4	-569,13494
chr9:104501162-104502692	chr9	+	104501177	104502640	True	NM_019592,NM_133445	chr9,chr9	+,-	RNF20,GRIN3A	-205095,-315
chr3:14692705-14692907	chr3	+	14692711	14692955	True	NM_016474,NM_001080423	chr3,chr3	+,-	C3orf19,GRIP2	297,-109123
chr11:33063767-33064534	chr11	+	33063987	33064211	True	NM_018393,NM_001145541,NM_001326	chr11,chr11,chr11	+,+,-	TCP11L1,TCP11L1,CSTF3	-3082,-2484,118880
chr17:78196097-78196509	chr17	+	78196184	78196524	True	NM_000199,NM_173626,NM_001166349,NM_001166348,NM_001166347	chr17,chr17,chr17,chr17,chr17	-,+,+,+,+	SGSH,SLC26A11,SLC26A11,SLC26A11,SLC26A11	-1985,-2035,-2035,-2035,-2035
chr8:27473897-27474260	chr8	+	27473935	27474241	True	NM_001171138,NM_016240,NM_203339,NM_001831	chr8,chr8,chr8,chr8	-,+,-,-	CLU,SCARA3,CLU,CLU	-4667,17335,-4997,-1608
chr11:67071775-67072498	chr11	+	67072077	67072483	True	NM_021173,NM_017857	chr11,chr11	-,+	POLD4,SSH3	48619,-1209
chr2:120104445-120106183	chr2	+	120104606	120105971	True	NM_001079862,NM_001017927	chr2,chr2	+,-	DBI,C2orf76	18532,18349
chr1:32574929-32575336	chr1	+	32575093	32575200	True	NM_012316,NM_019118	chr1,chr1	+,-	KPNA6,TMEM234	-1500,112776
chr13:21535797-21537083	chr13	+	21535856	21536921	True	NM_022459,NM_005870	chr13,chr13	-,+	XPO4,SAP18	-58943,177731
chr13:98605949-98606378	chr13	+	98606016	98606358	True	NM_178861,NM_002271	chr13,chr13	-,+	RNF113B,IPO5	223221,-139
chr9:136215578-136215812	chr9	+	136215640	136215790	True	NM_133640,NM_000972,NM_181491,NR_000017,NR_002447,NM_003172,NM_017503,NR_002448,NR_000016	chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,+,-,+,+,-,+,+,+	MED22,RPL7A,MED22,SNORD36B,SNORD24,SURF1,SURF2,SNORD36A,SNORD36C	-668,-622,-668,1158,460,7621,7630,1520,1910
chrX:152938064-152938577	chrX	+	152938357	152938523	True	NM_001142805,NM_001039582,NM_001135740	chrX,chrX,chrX	+,-,-	SLC6A8,PNCK,PNCK	15228,1343,270
chr5:131882585-131884430	chr5	+	131882946	131884426	True	NM_005732,NM_000879	chr5,chr5	+,-	RAD50,IL5	8189,-3732
chr12:124246856-124247072	chr12	+	124246883	124247087	True	NM_207437,NM_001414	chr12,chr12	+,-	DNAH10,EIF2B1	6,-128560
chr16:4547892-4548360	chr16	+	4547892	4548031	True	NM_020677,NM_001127205	chr16,chr16	-,+	NMRAL1,HMOX2	-22996,-2085
chr2:17694338-17694595	chr2	+	17694380	17694481	True	NM_003385,NM_001099218	chr2,chr2	+,-	VSNL1,RAD51AP2	27325,5284
chr14:55226650-55226988	chr14	+	55226689	55226961	True	NR_036194,NM_001161577	chr14,chr14	-,+	MIR4308,SAMD4A	118000,-5239
chr2:45236870-45237176	chr2	+	45237064	45237192	True	NM_005413,NM_016932	chr2,chr2	+,-	SIX3,SIX2	-68078,-522
chr4:99914917-99915644	chr4	+	99914970	99915602	True	NR_037455,NM_015143,NM_001968	chr4,chr4,chr4	+,+,-	MIR3684,METAP1,EIF4E	2935,1185,-63184
chr15:22954277-22954602	chr15	+	22954410	22954592	True	NM_001033028,NM_001008860	chr15,chr15	+,-	CYFIP1,NIPA2	1162,79885
chr10:99791031-99792661	chr10	+	99791245	99792623	True	NM_014472,NM_018058	chr10,chr10	+,-	C10orf28,CRTAC1	101757,-660
chr11:67570778-67572084	chr11	+	67570949	67571872	True	NM_007103,NR_024249	chr11,chr11	+,-	NDUFV1,LOC645332	-196677,992
chr11:67570778-67572084	chr11	+	3441884	3441934	False	NM_007152,NR_024248	chr11,chr11	-,+	ZNF195,LOC650368	-41436,-39744
chr10:45869208-45869587	chr10	+	45869348	45869538	True	NM_001004297,NM_000698	chr10,chr10	-,+	OR13A1,ALOX5	-58292,90
chr1:86945490-86947332	chr1	+	86945595	86947288	True	NM_001285,NM_020729	chr1,chr1	+,-	CLCA1,ODF2L	-11132,-83570
chr22:21353725-21354430	chr22	+	21353769	21354425	True	NM_030573,NM_001008695,NR_027052,NR_027051	chr22,chr22,chr22,chr22	-,-,+,+	THAP7,THAP7,FLJ39582,FLJ39582	2029,2029,1785,1785
chr5:140166066-140166532	chr5	+	140166298	140166580	True	NM_031410,NM_031411,NM_002109,NM_031495,NM_018900,NM_018905	chr5,chr5,chr5,chr5,chr5,chr5	+,+,-,+,+,+	PCDHA1,PCDHA1,HARS,PCDHA2,PCDHA1,PCDHA2	-473,-473,-95327,7863,-473,7863
chr17:62463973-62464699	chr17	+	62464080	62464750	True	NM_007215,NM_001085423	chr17,chr17	-,+	POLG2,C17orf60	28486,-2575
chr11:64056560-64056789	chr11	+	64056576	64056832	True	NM_020155,NM_001177358,NM_001170880,NM_004322,NM_001170881,NM_001170726,NM_033310,NM_032989	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,-,+,+,+,-	GPR137,GPR137,GPR137,BAD,GPR137,GPR137,KCNK4,BAD	-3045,-4344,-3045,-4400,-4342,-4816,1960,-4400
chr1:19967176-19967903	chr1	+	19967208	19967866	True	NM_001204085,NM_001204084,NM_005380,NM_182744,NM_001204086,NM_004930	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-	NBL1,NBL1,NBL1,NBL1,NBL1,CAPZB	3999,2341,2940,1856,4393,-155142
chr3:149797923-149799580	chr3	+	149798233	149799422	True	NM_053024,NR_036538	chr3,chr3	-,+	PFN2,LOC646903	-109492,-109224
chr4:110725991-110727664	chr4	+	110726219	110727343	True	NM_018983,NM_000204,NM_032993	chr4,chr4,chr4	+,-,+	GAR1,CFI,GAR1	9322,-2884,9322
chr19:40972635-40972948	chr19	+	40972665	40972933	True	NM_000713,NM_020971	chr19,chr19	-,+	BLVRB,SPTBN4	-940,192
chr22:29841496-29842328	chr22	+	29841592	29842142	True	NR_002727,NM_021026	chr22,chr22	-,+	RFPL1S,RFPL1	-3474,-7071
chr22:35845665-35846234	chr22	+	35845674	35846234	True	NM_005368,NM_006739	chr22,chr22	-,+	MB,MCM5	167200,-49609
chr10:29186679-29186973	chr10	+	29186801	29187021	True	NR_033805,NM_012342	chr10,chr10	-,+	LOC220906,BAMBI	-365518,-220441
chr4:169930897-169931109	chr4	+	169930902	169931088	True	NM_001166110,NM_032783	chr4,chr4	+,-	PALLD,CBR4	-177797,430
chr19:10513590-10513907	chr19	+	10513639	10513769	True	NM_007065,NM_001111307,NR_031592	chr19,chr19,chr19	-,+,-	CDC37,PDE4A,MIR1181	552,17563,495
chr19:9476373-9476749	chr19	+	9476373	9476451	True	NM_198535,NM_003451	chr19,chr19	-,+	ZNF699,ZNF177	-60578,-2728
chr20:44719165-44720451	chr20	+	44719165	44720090	True	NM_020967,NM_001250	chr20,chr20	-,+	NCOA5,CD40	-585,26815
chr3:189506823-189508633	chr3	+	189507378	189508602	True	NM_018192,NM_001114980,NM_001114981,NM_001114982	chr3,chr3,chr3,chr3	-,+,+,+	LEPREL1,TP63,TP63,TP63	330363,20,20,20
chr14:74768712-74769365	chr14	+	74768721	74769283	True	NR_003256,NM_018228,NM_005050	chr14,chr14,chr14	-,+,-	ABCD4,VRTN,ABCD4	534,45882,534
chr7:76609132-76610045	chr7	+	76609158	76610070	True	NR_023383,NM_006682	chr7,chr7	+,-	PMS2P11,FGL2	68,219130
chr7:76609132-76610045	chr7	+	76111046	76111323	False	NR_003262,NM_001102596	chr7,chr7	-,+	FDPSL2A,DTX2	-6729,-1497
chr5:140869284-140869934	chr5	+	140869482	140869968	True	NM_032406,NM_032407,NM_018929,NM_018928,NM_001079812	chr5,chr5,chr5,chr5,chr5	+,+,+,+,-	PCDHGC4,PCDHGC5,PCDHGC5,PCDHGC4,DIAPH1	-4792,-725,-725,-4792,128704
chr9:35664093-35664948	chr9	+	35664156	35664888	True	NM_032818,NM_001216,NM_001195201,NM_001195200,NR_003051,NM_001195217,NM_174923	chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,+,+,+,-,+,+	C9orf100,CA9,CCDC107,CCDC107,RMRP,CCDC107,CCDC107	440,9026,-5920,-5920,-6141,-5920,-5920
chr1:218491232-218492497	chr1	+	218491457	218492390	True	NM_018040,NM_001135599	chr1,chr1	-,+	GPATCH2,TGFB2	-687048,26285
chr11:31837804-31838178	chr11	+	31837980	31838042	True	NM_001127612,NR_033971,NM_001604,NM_000280	chr11,chr11,chr11,chr11	-,+,-,-	PAX6,DKFZp686K1684,PAX6,PAX6	1517,71,-5101,-5101
chr8:145193231-145193560	chr8	+	145193252	145193530	True	NM_030974,NM_032450,NM_016458,NM_001099281,NM_001099280	chr8,chr8,chr8,chr8,chr8	-,+,+,+,+	SHARPIN,HEATR7A,FAM203A,HEATR7A,HEATR7A	-34112,9388,-631,9388,9388
chr8:145193231-145193560	chr8	+	145438460	145438738	False	NM_016458,NM_015201	chr8,chr8	+,-	FAM203A,BOP1	-631,76432
chr1:11333529-11333777	chr1	+	11333532	11333606	True	NM_004958,NM_013319	chr1,chr1	-,+	MTOR,UBIAD1	-10924,-328
chr1:199994781-199995468	chr1	+	199995240	199995408	True	NM_205860,NM_012482,NM_003822	chr1,chr1,chr1	+,-,+	NR5A2,ZNF281,NR5A2	1361,383816,1361
chr21:45977739-45978024	chr21	+	45977764	45977950	True	NM_198696,NM_198687,NM_198693	chr21,chr21,chr21	-,+,-	KRTAP10-3,KRTAP10-4,KRTAP10-2	743,15655,-6376
chr8:56987685-56987898	chr8	+	56987702	56987854	True	NM_001011667,NM_001146227,NR_002437,NM_001023	chr8,chr8,chr8,chr8	+,-,-,-	CHCHD7,RPS20,SNORD54,RPS20	136460,-562,-1242,-562
chr19:927167-927426	chr19	+	927218	927388	True	NM_138774,NM_005224,NM_032551	chr19,chr19,chr19	-,+,+	C19orf22,ARID3A,KISS1R	-13993,-1232,-9927
chr1:161144950-161146270	chr1	+	161145139	161146253	True	NM_000309,NM_001199874,NM_001199873,NM_003779,NM_001122764	chr1,chr1,chr1,chr1,chr1	+,-,-,-,+	PPOX,B4GALT3,B4GALT3,B4GALT3,PPOX	-9009,1555,1555,1555,-9009
chr9:90532727-90533361	chr9	+	90532852	90533224	True	NM_001145124,NM_001039803	chr9,chr9	+,-	FAM75C1,CDK20	-26,56521
chr9:90532727-90533361	chr9	+	90529383	90529755	False	NM_001145124,NM_001039803	chr9,chr9	+,-	FAM75C1,CDK20	3121,59990
chr9:90532727-90533361	chr9	-	90753042	90753414	False	NM_001145124,NM_001166137	chr9,chr9	+,-	FAM75C1,FAM75C2	-220216,-3142
chr9:90532727-90533361	chr9	-	90749552	90749924	False	NM_001145124,NM_001166137	chr9,chr9	+,-	FAM75C1,FAM75C2	-216726,26
chr3:12200267-12201397	chr3	+	12200512	12201250	True	NM_003256,NM_005037	chr3,chr3	-,+	TIMP4,PPARG	-45,128098
chr14:21835383-21836369	chr14	+	21835501	21836413	True	NM_020366,NM_007192	chr14,chr14	+,-	RPGRIP1,SUPT16H	-79422,16064
chr3:148437624-148438441	chr3	+	148437862	148438466	True	NM_003071,NM_032049	chr3,chr3	-,+	HLTF,AGTR1	365931,9500
chr5:133861715-133862021	chr5	+	133861722	133862010	True	NM_001033503,NM_015288	chr5,chr5	-,+	SAR1B,PHF15	106573,11
chr12:122905453-122906285	chr12	+	122905530	122906212	True	NM_002956,NM_198240,NM_014708	chr12,chr12,chr12	-,-,+	CLIP1,CLIP1,KNTC1	957,957,105596
chr20:37599174-37599851	chr20	+	37599182	37599637	True	NM_001190809,NR_033905,NR_027124,NM_021931	chr20,chr20,chr20,chr20	+,+,-,+	DHX35,DHX35,LOC339568,DHX35	-8252,-8252,253815,-8252
chr4:89724260-89725259	chr4	+	89724265	89725014	True	NM_001015045,NR_002806	chr4,chr4	-,+	FAM13A,FAM13AOS	19447,-93376
chr2:241939160-241939461	chr2	+	241939201	241939505	True	NR_033841,NM_001080437	chr2,chr2	-,+	LOC200772,SNED1	-32333,-997
chr19:4231659-4232879	chr19	+	4232845	4232913	True	NM_005755,NM_016539	chr19,chr19	+,-	EBI3,SIRT6	-3356,-50249
chr22:25384759-25385757	chr22	+	25384997	25385767	True	NM_001001663,NM_001145206	chr22,chr22	-,+	TMEM211,KIAA1671	-49683,38173
chr5:149115609-149116813	chr5	+	149115722	149116597	True	NM_001172698,NM_001892,NM_133263	chr5,chr5,chr5	+,-,+	PPARGC1B,CSNK1A1,PPARGC1B	-5958,-184715,-5958
chrX:63613562-63613808	chrX	+	63613589	63613849	True	NM_001010888,NM_017677	chrX,chrX	+,-	ZC3H12B,MTMR8	1094765,1536
chr5:146610608-146611965	chr5	+	146610672	146611796	True	NM_181678,NM_145001,NM_001112724	chr5,chr5,chr5	-,+,+	PPP2R2B,STK32A,STK32A	-149639,2782,2782
chr16:84151664-84152924	chr16	+	84151878	84152852	True	NM_003791,NM_178452	chr16,chr16	-,+	MBTPS1,LRRC50	-1361,26012
chr11:33795788-33796053	chr11	+	33795913	33795983	True	NM_012175,NM_033406,NM_012194	chr11,chr11,chr11	-,-,+	FBXO3,FBXO3,C11orf41	140,140,-232087
chr4:15647343-15648340	chr4	+	15647518	15648079	True	NM_001193534,NM_001193535,NM_012161,NM_001145191,NR_036464	chr4,chr4,chr4,chr4,chr4	-,-,-,+,-	FBXL5,FBXL5,FBXL5,FAM200B,FBXL5	9018,9018,9018,35272,9018
chr1:187229000-187230712	chr1	+	187229171	187230753	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-579612,-431190
chr6:74066198-74067282	chr6	+	74066206	74067149	True	NM_001017361,NM_001025290	chr6,chr6	+,-	C6orf221,DPPA5	5250,-2207
chr13:76124463-76125449	chr13	+	76124498	76125049	True	NM_203497,NM_006002	chr13,chr13	-,+	COMMD6,UCHL3	-12507,-622
chr16:15187154-15188056	chr16	+	15187166	15188074	True	NM_018427,NM_015027	chr16,chr16	-,+	RRN3,PDXDC1	134,-118397
chr5:99417418-99418224	chr5	+	99417602	99418006	True	NM_198507,NR_027503	chr5,chr5	+,-	FAM174A,LOC100133050	453117,306002
chr5:99417418-99418224	chr5	-	98828935	98828995	False	NM_001270,NR_036530	chr5,chr5	-,+	CHD1,LOC100289230	-566697,-564158
chr18:12658683-12658892	chr18	+	12658708	12658938	True	NM_147163,NM_001128626,NM_001128627,NM_020148	chr18,chr18,chr18,chr18	+,-,-,-	PSMG2,SPIRE1,SPIRE1,SPIRE1	-21,-796,-1977,-796
chr14:55697152-55699020	chr14	+	55697455	55698894	True	NM_017943,NM_014750	chr14,chr14	+,-	FBXO34,DLGAP5	39126,-39059
chr2:27428047-27429432	chr2	+	27428115	27429404	True	NM_016085,NR_028323,NM_021095,NM_001170795,NM_080592	chr2,chr2,chr2,chr2,chr2	+,-,-,+,+	C2orf28,SLC5A6,SLC5A6,C2orf28,C2orf28	5814,5821,5821,5814,5494
chr8:8013008-8014233	chr8	+	8013184	8013485	True	NR_031689,NR_024362	chr8,chr8	-,+	MIR548I3,FLJ10661	-66573,72606
chr8:8013008-8014233	chr8	-	12367198	12367499	False	NR_026789,NM_001137610	chr8,chr8	+,-	FAM66A,FAM86B2	-147722,-73346
chr2:34273999-34274824	chr2	+	34274151	34274666	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-535267,-320867
chr17:64959866-64960207	chr17	+	64959868	64960016	True	NM_014877,NM_014405	chr17,chr17	-,+	HELZ,CACNG4	281353,963
chr3:39448127-39448347	chr3	+	39448148	39448366	True	NM_001171174,NR_002325,NM_001012321,NM_002295,NR_002324	chr3,chr3,chr3,chr3,chr3	-,+,+,+,+	CX3CR1,SNORA6,RPSA,RPSA,SNORA62	-124922,1515,744,5,4178
chr20:61497059-61497620	chr20	+	61497323	61497627	True	NM_006602,NM_080750	chr20,chr20	-,+	TCFL5,DPH3P1	-4208,-20901
chrX:84497989-84498807	chrX	+	84497988	84498710	True	NM_021998,NM_001012980	chrX,chrX	+,-	ZNF711,SATL1	286,-134014
chr12:50693458-50693815	chr12	+	50693568	50693710	True	NM_016357,NM_001170804	chr12,chr12	-,+	LIMA1,LARP4	-16215,100881
chr22:20194545-20194761	chr22	+	20194545	20194745	True	NR_026919,NR_031618	chr22,chr22	+,-	LOC150197,MIR1286	-741,42039
chr20:42979980-42980920	chr20	+	42980265	42980955	True	NM_001080472,NM_001030003,NM_001030004,NM_175914	chr20,chr20,chr20,chr20	-,+,+,+	FITM2,HNF4A,HNF4A,HNF4A	-40376,3485,3485,3485
chr5:2753836-2754149	chr5	+	2753838	2754105	True	NM_178569,NM_001134222,NM_033267	chr5,chr5,chr5	+,-,-	C5orf38,IRX2,IRX2	-1627,-2069,-2069
chr1:24104247-24104912	chr1	+	24104363	24104697	True	NM_001127621,NM_020362	chr1,chr1	-,+	GALE,PITHD1	21415,178
chr6:50785129-50785332	chr6	+	50785132	50785376	True	NM_001037498,NM_003221	chr6,chr6	-,+	DEFB112,TFAP2B	-768768,1062
chr19:11407858-11408331	chr19	+	11407997	11408101	True	NM_020812,NM_012466	chr19,chr19	-,+	DOCK6,TSPAN16	-34840,-1225
chr11:94214194-94215517	chr11	+	94214628	94215562	True	NM_017704,NM_005590	chr11,chr11	+,-	ANKRD49,MRE11A	11590,11536
chr2:178078417-178079243	chr2	+	178078505	178079252	True	NM_194247,NR_036075	chr2,chr2	+,-	HNRNPA3,MIR3128	-1141,41540
chr4:106816214-106816461	chr4	+	106816241	106816369	True	NM_020395,NM_001184691,NM_001184690,NM_001184693,NM_001184692,NM_001033047	chr4,chr4,chr4,chr4,chr4,chr4	-,+,+,+,+,+	INTS12,NPNT,NPNT,NPNT,NPNT,NPNT	-186360,227,227,227,227,227
chr9:65627757-65629327	chr9	+	65627816	65629218	True	NR_024496,NM_015667	chr9,chr9	+,-	LOC442421,FAM75A7	865050,-118206
chr9:65627757-65629327	chr9	+	43887044	43887214	False	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	-256314,-202210
chr9:65627757-65629327	chr9	-	39107000	39107050	False	NM_033655,NM_001085452	chr9,chr9	-,+	CNTNAP3,FAM75A1	181300,248648
chr9:65627757-65629327	chr9	+	40303477	40304261	False	NM_001083124,NM_033160	chr9,chr9	+,-	FAM75A3,ZNF658	396029,487901
chr1:151797795-151798430	chr1	+	151797803	151798319	True	NR_024237,NM_001001523,NM_005060	chr1,chr1,chr1	+,-,-	LOC100132111,RORC,RORC	12625,284,6079
chr2:27310095-27310322	chr2	+	27310104	27310364	True	NM_007046,NM_006488,NM_000221,NM_001134693	chr2,chr2,chr2,chr2	+,+,+,-	EMILIN1,KHK,KHK,OST4	-8720,-544,-544,-15537
chr11:124485762-124486117	chr11	+	124485945	124486132	True	NM_032811,NR_016021,NM_052959,NM_170601	chr11,chr11,chr11,chr11	+,+,+,-	TBRG1,TBRG1,PANX3,SIAE	6609,6609,-4543,57698
chr2:177051447-177052471	chr2	+	177051808	177052460	True	NM_024501,NR_033979	chr2,chr2	+,-	HOXD1,LOC401022	846,1276
chr5:176729443-176729996	chr5	+	176729449	176729981	True	NM_130781,NM_001142935,NM_013237,NM_031300,NM_001031677	chr5,chr5,chr5,chr5,chr5	-,-,+,-,-	RAB24,MXD3,PRELID1,MXD3,RAB24	813,9361,853,9361,813
chr2:220492851-220493128	chr2	+	220492906	220493146	True	NM_001173408,NM_005070,NM_201574	chr2,chr2,chr2	-,+,+	OBSL1,SLC4A3,SLC4A3	-56638,-665,-665
chr14:23653108-23653551	chr14	+	23653108	23653412	True	NM_012244,NM_017924	chr14,chr14	-,+	SLC7A8,C14orf119	-259,-88371
chr22:21271023-21271488	chr22	+	21271066	21271472	True	NM_058004,NM_005207	chr22,chr22	-,+	PI4KA,CRKL	-57996,241
chr10:26929660-26929866	chr10	+	26929690	26929826	True	NR_026794,NM_001012750	chr10,chr10	+,-	LOC731789,ABI1	2210,220240
chr4:74470113-74470900	chr4	+	74470217	74470447	True	NM_177532,NM_001133	chr4,chr4	-,+	RASSF6,AFM	15745,-122807
chrX:129471717-129473150	chrX	+	129472025	129472960	True	NM_022810,NM_003951,NM_178471	chrX,chrX,chrX	+,+,-	SLC25A14,SLC25A14,GPR119	1086,1086,46601
chr11:18475653-18476110	chr11	+	18475918	18476154	True	NM_144972,NM_001144071,NM_006292	chr11,chr11,chr11	+,+,-	LDHAL6A,LDHAL6A,TSG101	1219,1219,72385
chr11:111371892-111372990	chr11	+	111372147	111373039	True	NR_029839,NM_017589	chr11,chr11	+,-	MIR34B,BTG4	10623,10075
chr2:172948624-172949261	chr2	+	172948624	172949278	True	NM_178120,NM_001038493,NM_004405	chr2,chr2,chr2	+,+,-	DLX1,DLX1,DLX2	929,929,18250
chr4:41213792-41215712	chr4	+	41214298	41215628	True	NM_173075,NM_001166050,NM_004307,NM_004181	chr4,chr4,chr4,chr4	-,-,-,+	APBB2,APBB2,APBB2,UCHL1	1057,1057,1057,43269
chr6:73972646-73972876	chr6	+	73972676	73972872	True	NM_001017361,NM_030568	chr6,chr6	+,-	C6orf221,KHDC1	99527,85
chr4:96452162-96453950	chr4	+	96452521	96453979	True	NM_005390,NM_003728	chr4,chr4	+,-	PDHA2,UNC5C	307259,16432
chr3:191055462-191056250	chr3	+	191055508	191056289	True	NM_178335,NM_198152,NM_174908	chr3,chr3,chr3	+,-,+	CCDC50,UTS2D,CCDC50	-8685,-7183,-8685
chr14:65065231-65066568	chr14	+	65065239	65066535	True	NM_006977,NM_172365	chr14,chr14	-,+	ZBTB25,C14orf50	-94685,-48677
chr1:95390033-95391229	chr1	+	95390222	95391213	True	NM_001839,NR_033998	chr1,chr1	-,+	CNN3,LOC729970	1572,2370
chr4:2813339-2813540	chr4	+	2813344	2813572	True	NM_001145855,NM_001145856,NM_024309,NM_003023	chr4,chr4,chr4,chr4	+,+,-,+	SH3BP2,SH3BP2,TNIP2,SH3BP2	373,6339,-55241,6968
chr19:41767147-41768292	chr19	+	41767146	41768161	True	NM_144732,NM_007040,NM_000660	chr19,chr19,chr19	+,+,-	HNRNPUL1,HNRNPUL1,TGFB1	229,1958,91721
chr22:20102787-20103514	chr22	+	20102865	20103451	True	NM_182984,NM_022727,NM_002882	chr22,chr22,chr22	-,-,+	TRMT2A,TRMT2A,RANBP1	1367,1367,1572
chr13:111644032-111644261	chr13	+	111644091	111644153	True	NM_017664,NM_001113511	chr13,chr13	-,+	ANKRD10,ARHGEF7	-76675,123470
chr3:134516575-134517530	chr3	+	134516664	134517526	True	NM_178554,NM_004441	chr3,chr3	-,+	KY,EPHB1	-146800,-2616
chr17:4941508-4942040	chr17	+	4941706	4941880	True	NM_001104577,NM_017986,NM_153018	chr17,chr17,chr17	-,-,+	GPR172B,GPR172B,ZFP3	-2979,-2979,39873
chr16:57830791-57831314	chr16	+	57830792	57831360	True	NM_001130099,NM_001130100,NM_005550,NM_005886	chr16,chr16,chr16,chr16	-,-,-,+	KIFC3,KIFC3,KIFC3,KATNB1	619,5129,5129,-61189
chr11:60719221-60719759	chr11	+	60719339	60719778	True	NR_027391,NM_006725,NM_016582	chr11,chr11,chr11	-,+,-	SLC15A3,CD6,SLC15A3	-82,19336,-82
chr11:14994987-14995264	chr11	+	14995014	14995276	True	NM_000728,NM_001033953,NM_001033952,NM_001741	chr11,chr11,chr11,chr11	+,-,-,-	CALCB,CALCA,CALCA,CALCA	99869,-1182,-1182,-1182
chr17:48797401-48797799	chr17	+	48797455	48797760	True	NM_052855,NM_016424,NM_006107	chr17,chr17,chr17	-,+,+	ANKRD40,LUC7L3,LUC7L3	-12185,-580,-580
chr20:46021300-46022700	chr20	+	46021519	46022569	True	NM_183048,NR_024594	chr20,chr20	-,+	ZMYND8,LOC100131496	-36045,-74331
chr11:74952115-74952329	chr11	+	74952242	74952328	True	NM_001195528,NR_029891	chr11,chr11	+,-	LOC441617,MIR326	-343,93952
chr2:191414971-191416738	chr2	+	191415037	191416786	True	NM_001142645,NM_005966	chr2,chr2	-,+	TMEM194B,NAB1	-15569,97061
chr12:56880344-56881327	chr12	+	56880689	56881301	True	NM_013267,NM_207344	chr12,chr12	-,+	GLS2,SPRYD4	930,-18439
chr3:50607430-50607796	chr3	+	50607616	50607849	True	NM_016173,NM_001171743,NM_016210,NM_001171741,NM_001171740	chr3,chr3,chr3,chr3,chr3	+,-,-,-,-	HEMK1,C3orf18,C3orf18,C3orf18,C3orf18	-758,-2393,-2393,668,-2393
chr12:133758347-133758597	chr12	+	133758506	133758614	True	NM_001191054,NM_152943,NM_003415,NM_001165885,NM_001165884,NM_001165887,NM_001165886,NM_001165881,NM_001165883	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,+,+,+,+,+,+	LOC647589,ZNF268,ZNF268,ZNF268,ZNF268,ZNF268,ZNF268,ZNF268,ZNF268	53858,-562,-562,-562,-562,-562,-562,-497,-562
chr12:53044534-53045824	chr12	+	53044569	53045754	True	NM_199187,NM_000423	chr12,chr12	+,-	KRT18,KRT2	296900,255
chr15:102032706-102032916	chr15	+	102032739	102032939	True	NM_002570,NM_001005326,NM_138324,NM_138319,NM_138325,NM_138322,NM_138323,NM_138320,NM_138321	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,+,-,-,-,-,-,-,-	PCSK6,OR4F6,PCSK6,PCSK6,PCSK6,PCSK6,PCSK6,PCSK6,PCSK6	-2552,312983,-2552,-2552,-2552,-2552,-2552,-2552,-2552
chr12:57038249-57039082	chr12	+	57038535	57039047	True	NR_002737,NM_003725,NM_001686,NM_013449,NR_003046	chr12,chr12,chr12,chr12,chr12	-,+,-,-,-	SNORD59A,HSD17B6,ATP5B,BAZ2A,SNORD59B	-26,118060,855,-8372,-997
chr13:45493528-45494882	chr13	+	45493718	45494684	True	NM_012345,NM_018559	chr13,chr13	-,+	NUFIP1,KIAA1704	68979,69002
chr3:57090135-57090780	chr3	+	57090476	57090828	True	NM_181727,NM_001128615	chr3,chr3	+,-	SPATA12,ARHGEF3	3640,22558
chr16:87740052-87740317	chr16	+	87740190	87740260	True	NM_020655,NM_001184854	chr16,chr16	+,-	JPH3,KLHDC4	-103742,59388
chr19:50636020-50637096	chr19	+	50637032	50637108	True	NR_024223,NR_024224,NR_024225,NR_024226,NR_024227,NR_024228,NR_024229,NM_001145809,NR_024215,NR_024214,NR_024231,NR_024230,NR_024242,NR_024243	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,+,-,-,-,-,-,-	SNAR-A5,SNAR-A7,SNAR-A11,SNAR-A9,SNAR-A6,SNAR-A8,SNAR-A10,MYH14,SNAR-A4,SNAR-A3,SNAR-B1,SNAR-B2,SNAR-A14,SNAR-D	-5253,-5253,-5253,-5253,-5253,-5253,-5253,69776,-5253,-5253,63,63,-5253,6519
chr19:50636020-50637096	chr19	+	50642405	50642481	False	NM_001145809,NR_024243,NR_024231,NR_024230	chr19,chr19,chr19,chr19	+,-,-,-	MYH14,SNAR-D,SNAR-B1,SNAR-B2	64403,1146,63,63
chr10:120926618-120928209	chr10	+	120926712	120928124	True	NM_005308,NM_213649	chr10,chr10	+,-	GRK5,SFXN4	39072,-1508
chr2:33106971-33108080	chr2	+	33107241	33108101	True	NR_027100,NM_021209,NR_027099	chr2,chr2,chr2	+,-,+	LOC285045,NLRC4,LOC285045	-26,-616429,4
chr19:44861204-44862158	chr19	+	44861210	44862016	True	NM_001083335,NM_013380,NM_181756	chr19,chr19,chr19	-,-,+	ZFP112,ZFP112,ZNF233	-354,-354,-97186
chr7:4722248-4722531	chr7	+	4722275	4722455	True	NM_020144,NM_001037165	chr7,chr7	-,+	PAPOLB,FOXK1	179220,-396
chr19:40722215-40722852	chr19	+	40722343	40722850	True	NM_002446,NM_152479,NM_024877	chr19,chr19,chr19	+,-,-	MAP3K10,TTC9B,CNTD2	-24743,1507,9798
chr3:36931431-36933352	chr3	+	36931558	36933338	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	53260,101502
chr11:776453-776668	chr11	+	776605	776717	True	NM_006755,NM_182612	chr11,chr11	+,-	TALDO1,PDDC1	-29224,820
chr5:167910618-167912247	chr5	+	167910672	167912060	True	NM_002887,NR_029520	chr5,chr5	+,-	RARS,MIR103-1	1402,75971
chr1:11072676-11072895	chr1	+	11072690	11072944	True	NM_007375,NM_001170754	chr1,chr1	+,-	TARDBP,C1orf127	-62,-30596
chr8:29208875-29209095	chr8	+	29208886	29209108	True	NM_057158,NM_001394,NM_024567	chr8,chr8,chr8	-,-,+	DUSP4,DUSP4,HMBOX1	-2564,-619,-460717
chr12:29538129-29538389	chr12	+	29538216	29538286	True	NM_018099,NM_016570	chr12,chr12	+,-	FAR2,ERGIC2	-161669,-4073
chr19:57631470-57632192	chr19	+	57631469	57631895	True	NM_020903,NM_052882	chr19,chr19	+,-	USP29,ZIM3	-11,24725
chr8:27852339-27853935	chr8	+	27852391	27853877	True	NM_173833,NM_018091	chr8,chr8	-,+	SCARA5,ELP3	-2022,96706
chr15:52048114-52049521	chr15	+	52048293	52049141	True	NM_001143917,NM_014548,NM_001142885	chr15,chr15,chr15	-,+,+	LYSMD2,TMOD2,TMOD2	-4643,-4586,-4586
chr4:155663572-155663822	chr4	+	155663658	155663830	True	NM_004744,NM_021870	chr4,chr4	+,-	LRAT,FGG	1332,-129756
chr1:157972139-157972649	chr1	+	157972184	157972692	True	NM_018240,NR_033946	chr1,chr1	+,-	KIRREL,LOC646268	-9179,137788
chr22:33192958-33193437	chr22	+	33192965	33193406	True	NM_003490,NM_000362	chr22,chr22	-,+	SYN3,TIMP3	209459,3395
chr7:22861565-22862275	chr7	+	22861640	22862154	True	NR_003075,NM_019059	chr7,chr7	+,-	SNORD93,TOMM7	34077,317
chrX:134937066-134937382	chrX	+	134937178	134937241	True	NM_018666,NM_001017436	chrX,chrX	+,-	SAGE1,CT45A4	38543,-443
chrX:134937066-134937382	chrX	+	134954433	134954496	False	NM_001007551,NM_018666,NM_001172288	chrX,chrX,chrX	-,+,-	CT45A5,SAGE1,CT45A5	-439,21288,-439
chrX:134937066-134937382	chrX	-	134865707	134865770	False	NM_152582,NM_001017436	chrX,chrX	+,+	CT45A2,CT45A4	443,443
chrX:134937066-134937382	chrX	-	134882982	134883045	False	NM_001017436,NM_001017435	chrX,chrX	-,+	CT45A4,CT45A3	53741,442
chrX:46989274-46989880	chrX	+	46989273	46989644	True	NM_001204466,NM_001135998	chrX,chrX	+,-	RBM10,NDUFB11	14972,14502
chr12:121080172-121080932	chr12	+	121080176	121080960	True	NM_031205,NM_001033677,NM_198202,NM_004276	chr12,chr12,chr12,chr12	+,+,-,+	CABP1,CABP1,POP5,CABP1	7410,-1805,-60975,7410
chr11:17294937-17295958	chr11	+	17294954	17295773	True	NM_002645,NM_005013	chr11,chr11	-,+	PIK3C2A,NUCB2	-103600,2512
chr18:33552745-33553807	chr18	+	33552841	33553542	True	NR_029616,NM_031446,NM_001201476,NM_001201475,NM_001201474	chr18,chr18,chr18,chr18,chr18	-,+,+,+,+	MIR187,C18orf21,C18orf21,C18orf21,C18orf21	-67952,-304,-304,-304,-304
chr9:132518111-132519273	chr9	+	132518117	132519010	True	NM_014506,NM_004878	chr9,chr9	+,-	TOR1B,PTGES	46421,-2773
chr10:18555537-18556787	chr10	+	18555973	18556789	True	NM_000724,NM_182543	chr10,chr10	+,-	CACNB2,NSUN6	-6448,383811
chr13:51682012-51682565	chr13	+	51682080	51682515	True	NR_003923,NM_145019	chr13,chr13	-,+	GUCY1B2,FAM124A	-41787,113991
chr1:197881600-197881941	chr1	+	197881604	197881898	True	NM_001014434,NM_001195216,NM_001024594,NM_020204	chr1,chr1,chr1,chr1	+,-,+,+	LHX9,DENND1B,C1orf53,LHX9	-20,-136981,-9973,4618
chr13:114053314-114053690	chr13	+	114053322	114053534	True	NM_024719,NM_017905	chr13,chr13	-,+	GRTP1,TMCO3	-34859,91773
chr9:135938535-135939347	chr9	+	135938739	135939378	True	NM_001807,NM_006266	chr9,chr9	+,-	CEL,RALGDS	-1425,57233
chr19:19384952-19386520	chr19	+	19385013	19386561	True	NM_001001524,NM_015329	chr19,chr19	-,+	TM6SF2,MAU2	-939,45068
chr2:129078126-129079471	chr2	+	129078138	129079462	True	NM_004807,NR_027671	chr2,chr2	-,+	HS6ST1,UGGT1	-1967,-229407
chr5:144608344-144609286	chr5	+	144608586	144609308	True	NM_182960,NM_152550	chr5,chr5	-,+	PRELID2,SH3RF2	605609,706817
chr1:165737878-165738132	chr1	+	165737883	165738095	True	NM_019026,NM_012474	chr1,chr1	-,+	TMCO1,UCK2	90,58636
chrY:6296763-6297337	chrY	+	6296834	6297348	True	NR_001535,NR_003590,NR_001536	chrY,chrY,chrY	+,-,-	TTTY21,TTTY2B,TTTY2	14126,-349,-349
chrY:6296763-6297337	chrY	-	9573031	9573545	False	NR_003590,NR_003588,NR_001536	chrY,chrY,chrY	+,-,+	TTTY2B,TTTY21B,TTTY2	349,-14126,349
chr3:179159888-179160711	chr3	+	179159975	179160754	True	NM_033540,NM_021629	chr3,chr3	+,-	MFN1,GNB4	-94555,8674
chr22:25615353-25615555	chr22	+	25615413	25615567	True	NM_182492,NM_000496	chr22,chr22	-,+	LRP5L,CRYBB2	143007,44
chr15:42695167-42696161	chr15	+	42695214	42696158	True	NM_022473,NM_173090,NM_173088,NM_173089	chr15,chr15,chr15,chr15	-,+,+,+	ZFP106,CAPN3,CAPN3,CAPN3	53622,818,-677,818
chr17:73854575-73854981	chr17	+	73854876	73855006	True	NM_012478,NM_001080419	chr17,chr17	-,+	WBP2,UNK	-3375,-74246
chr12:54367006-54367229	chr12	+	54367011	54367165	True	NM_014212,NR_003716	chr12,chr12	+,-	HOXC11,HOTAIR	-152,-4496
chr11:61522918-61523374	chr11	+	61522987	61523377	True	NR_026882,NM_013279,NM_001127392	chr11,chr11,chr11	-,+,+	DKFZP434K028,C11orf9,C11orf9	1809,-177,-2917
chr3:132136211-132136484	chr3	+	132136274	132136386	True	NM_032169,NM_015268	chr3,chr3	-,+	ACAD11,DNAJC13	242639,166
chr8:54933977-54934462	chr8	+	54934012	54934410	True	NM_201437,NM_014175,NM_006756	chr8,chr8,chr8	-,+,-	TCEA1,MRPL15,TCEA1	648,113370,648
chr7:150971324-150972096	chr7	+	150971527	150971931	True	NM_001003802,NR_030407,NM_003078	chr7,chr7,chr7	-,+,-	SMARCD3,MIR671,SMARCD3	1939,-36071,2350
chr1:45272315-45273549	chr1	+	45272448	45273426	True	NM_001013632,NM_004073,NM_001136537	chr1,chr1,chr1	-,+,+	TCTEX1D4,PLK3,BTBD19	-125,-6463,727
chr6:146285218-146285422	chr6	+	146285271	146285437	True	NM_001042683,NM_173082,NM_000838	chr6,chr6,chr6	-,-,+	SHPRH,SHPRH,GRM1	-38,-38,63344
chr2:113301863-113303375	chr2	+	113302140	113303205	True	NM_001137604,NR_033871,NM_019014	chr2,chr2,chr2	+,-,+	POLR1B,FLJ42351,POLR1B	-2702,98615,-2702
chr18:14541364-14543159	chr18	+	14542396	14543100	True	NM_001137671,NM_001145029,NR_026756	chr18,chr18,chr18	-,+,+	POTEC,ANKRD30B,LOC284233	549,205138,-205030
chr14:103018356-103018633	chr14	+	103018369	103018651	True	NM_152326,NR_036192	chr14,chr14	-,+	ANKRD9,MIR4309	-42241,-12439
chr22:38965043-38965689	chr22	+	38965387	38965681	True	NM_001002880,NM_007068	chr22,chr22	+,-	CBY1,DMC1	86976,558
chr3:105573175-105573567	chr3	+	105573177	105573385	True	NM_170662,NM_001627	chr3,chr3	-,+	CBLB,ALCAM	14564,-487527
chr1:232645623-232646519	chr1	+	232645776	232646479	True	NM_020808,NM_019090	chr1,chr1	-,+	SIPA1L2,KIAA1383	4821,294158
chr14:20757725-20758266	chr14	+	20757765	20758291	True	NM_001004479,NM_138376	chr14,chr14	+,-	OR11H4,TTC5	-46865,15912
chr10:99608727-99608962	chr10	+	99608873	99608991	True	NM_003015,NM_001010917	chr10,chr10	-,+	SFRP5,GOLGA7B	-77117,1004
chr22:30901821-30902185	chr22	+	30901881	30901955	True	NM_001161368,NM_174977,NM_016498	chr22,chr22,chr22	-,-,+	SEC14L4,SEC14L4,MTFP1	-183,-183,-80321
chr19:3869877-3870847	chr19	+	3870604	3870886	True	NM_001145640,NM_033064,NM_015174,NR_027149	chr19,chr19,chr19,chr19	-,+,-,-	ZFR2,ATCAY,ZFR2,ZFR2	-1577,9731,-1577,-1577
chr4:98951246-98952758	chr4	+	98951245	98951533	True	NM_174952,NM_001100426	chr4,chr4	-,+	C4orf37,RAP1GDS1	112908,230993
chr19:1885661-1885895	chr19	+	1885661	1885724	True	NM_079834,NM_001130111,NM_031213	chr19,chr19,chr19	+,-,-	SCAMP4,FAM108A1,FAM108A1	19648,-143,-143
chr12:6484799-6485032	chr12	+	6484803	6484997	True	NM_001159576,NM_002342,NM_001159575,NM_001038	chr12,chr12,chr12,chr12	-,+,-,-	SCNN1A,LTBR,SCNN1A,SCNN1A	-413,8359,1576,-32
chr17:18218127-18218461	chr17	+	18218155	18218329	True	NM_004618,NM_144775	chr17,chr17	-,+	TOP3A,SMCR8	42,264
chr3:171755856-171756091	chr3	+	171755886	171756142	True	NM_001135095,NM_002662,NM_022763	chr3,chr3,chr3	+,-,+	FNDC3B,PLD1,FNDC3B	2201,-227613,1275
chr17:53488762-53490101	chr17	+	53488880	53490124	True	NM_002126,NM_012329	chr17,chr17	+,-	HLF,MMD	-146623,9267
chr2:55744889-55746218	chr2	+	55745014	55746152	True	NM_080667,NM_018084,NM_001122964	chr2,chr2,chr2	+,-,-	CCDC104,CCDC88A,SMEK2	587,-97957,98694
chr7:99070765-99071334	chr7	+	99070807	99071168	True	NM_213603,NM_001198879,NM_001003714,NM_001039178,NM_001003713,NM_001013258,NM_004889	chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,-,-,-,-,+,-	ZNF789,ATP5J2-PTCD1,ATP5J2,ATP5J2,ATP5J2,ZNF789,ATP5J2	-343,-6983,-6983,-6983,-6983,-343,-6983
chr22:21386520-21386740	chr22	+	21386548	21386608	True	NM_004173,NR_027006	chr22,chr22	-,+	SLC7A4,LOC400891	289,13640
chr1:48348612-48350157	chr1	+	48348768	48350176	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	112436,338180
chr11:72382433-72382737	chr11	+	72382453	72382785	True	NM_033388,NM_001146209,NM_002599	chr11,chr11,chr11	+,-,-	ATG16L2,PDE2A,PDE2A	142665,-2345,2759
chr13:95954737-95956046	chr13	+	95954781	95955536	True	NM_001105515,NM_005845,NM_001160100	chr13,chr13,chr13	-,-,+	ABCC4,ABCC4,CLDN10	-1094,-1094,130316
chr5:140568270-140568505	chr5	+	140568432	140568506	True	NM_020957,NM_018930,NM_019119,NM_031947	chr5,chr5,chr5,chr5	+,+,+,-	PCDHB16,PCDHB10,PCDHB9,SLC25A2	-7503,3445,-1590,115156
chr5:140568270-140568505	chr5	+	140580890	140580942	False	NM_018932,NM_031947,NM_018930,NM_018931	chr5,chr5,chr5,chr5	+,-,+,+	PCDHB12,SLC25A2,PCDHB10,PCDHB11	7348,102720,-8989,-1593
chr1:17091981-17092339	chr1	+	17091980	17092330	True	NR_002729,NR_037446	chr1,chr1	-,+	MST1P9,MIR3675	-1005,-84281
chr1:17091981-17092339	chr1	-	234952457	234952807	False	NM_182972,NR_033927	chr1,chr1	-,+	IRF2BP2,NCRNA00184	-207186,-187451
chr16:31367144-31367384	chr16	+	31367191	31367323	True	NM_000887,NM_005205	chr16,chr16	+,-	ITGAX,COX6A2	-733,72476
chr13:55014943-55015228	chr13	+	55015186	55015274	True	NR_031628,NM_006418	chr13,chr13	-,+	MIR1297,OLFM4	-129003,-1412361
chr6:96027171-96027412	chr6	+	96027274	96027429	True	NM_001143957,NM_024641	chr6,chr6	-,+	GPR63,MANEA	1257985,-1916
chr1:16009990-16010224	chr1	+	16010083	16010273	True	NM_024758,NM_015164	chr1,chr1	-,+	AGMAT,PLEKHM2	-98478,553
chr12:109276211-109276818	chr12	+	109276353	109276851	True	NM_001917,NM_001161330	chr12,chr12	+,-	DAO,SSH1	-2547,-24994
chr3:9946878-9947662	chr3	+	9947611	9947677	True	NM_001193380,NM_153480,NM_001199552,NM_153483	chr3,chr3,chr3,chr3	+,+,-,+	IL17RE,IL17RE,CIDEC,IL17RE	-3153,-3153,-25673,-3369
chr1:109506182-109506459	chr1	+	109506223	109506304	True	NM_013296,NM_015127,NM_001048210	chr1,chr1,chr1	+,-,-	GPSM2,CLCC1,CLCC1	-86671,-112,-112
chr13:92046562-92048204	chr13	+	92046708	92047859	True	NR_027039,NM_004466	chr13,chr13	-,+	LOC144776,GPC5	-467857,3075
chr15:42499613-42500118	chr15	+	42499616	42500012	True	NM_198141,NR_030357,NM_015289	chr15,chr15,chr15	+,-,-	GANC,MIR627,VPS39	66353,-7752,546
chr22:51179062-51180486	chr22	+	51179155	51179994	True	NM_001003789,NM_001097	chr22,chr22	-,+	RABL2B,ACR	42156,-2554
chr7:138353503-138354125	chr7	+	138353561	138353919	True	NM_174959,NM_001139456,NM_001085429	chr7,chr7,chr7	-,-,+	SVOPL,SVOPL,TMEM213	-4592,9921,128819
chr15:24920788-24921042	chr15	+	24920877	24921049	True	NM_018958,NR_026647	chr15,chr15	+,-	C15orf2,PWRN2	-387,-505824
chr2:68589527-68590201	chr2	+	68589556	68590240	True	NM_015463,NM_002664	chr2,chr2	-,+	CNRIP1,PLEK	-42373,2081
chr11:10476209-10476660	chr11	+	10476224	10476684	True	NM_001025390,NM_001025389,NM_000480,NM_001172430,NM_001172431,NM_001190702	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,-	AMPD3,AMPD3,AMPD3,AMPD3,AMPD3,MTRNR2L8	796,-19,-4051,5993,-4407,54089
chr22:35480201-35482008	chr22	+	35480245	35481973	True	NM_001008494,NM_005368	chr22,chr22	+,-	ISX,MB	-18173,531461
chr22:45403915-45404121	chr22	+	45403985	45404055	True	NM_007172,NM_138415,NM_001135862	chr22,chr22,chr22	+,-,-	NUP50,PHF21B,PHF21B	155670,1576,1804
chr18:60384355-60384955	chr18	+	60384372	60384949	True	NM_194449,NM_176787	chr18,chr18	+,-	PHLPP1,PIGN	-1751,-530083
chrY:14107083-14107436	chrY	+	14107124	14107434	True	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	666863,426005
chrY:14107083-14107436	chrX	-	3228414	3228724	False	NM_004042,NM_015419	chrX,chrX	+,-	ARSF,MXRA5	-243625,36010
chr12:93319149-93319797	chr12	+	93319268	93319663	True	NM_001004330,NM_003566	chr12,chr12	+,-	PLEKHG7,EEA1	-189061,3506
chr17:54905712-54907424	chr17	+	54905808	54907184	True	NM_001085430,NM_003647	chr17,chr17	-,+	C17orf67,DGKE	-12558,4275
chr5:151140434-151142136	chr5	+	151140592	151141092	True	NM_005754,NM_004045	chr5,chr5	+,-	G3BP1,ATOX1	10383,-2382
chr16:1830127-1831409	chr16	+	1830624	1831300	True	NM_080861,NM_002513,NM_012225,NM_023936,NM_001010865	chr16,chr16,chr16,chr16,chr16	-,-,+,-,+	SPSB3,NME3,NUBP2,MRPS34,EME2	1331,-8914,1632,-7484,-7446
chr1:40840191-40841713	chr1	+	40840427	40841458	True	NM_022733,NM_001198978,NM_001852	chr1,chr1,chr1	+,+,-	SMAP2,SMAP2,COL9A2	-1101,-174,-57488
chr2:88272852-88273550	chr2	+	88272988	88273514	True	NM_198274,NM_001024457	chr2,chr2	+,-	SMYD1,RGPD1	93784,11858
chr2:88272852-88273550	chr2	-	113039917	113039980	False	NM_198581,NM_032494	chr2,chr2	+,-	ZC3H6,ZC3H8	-6803,-27253
chr2:88272852-88273550	chr2	-	87156673	87156893	False	NM_004931,NM_001024457	chr2,chr2	-,+	CD8B,RGPD1	-67626,-11986
chr1:161715946-161716691	chr1	+	161716156	161716263	True	NM_007240,NR_002595	chr1,chr1	+,-	DUSP12,RPL31P11	3317,-61114
chr5:134368247-134368597	chr5	+	134368278	134368598	True	NM_002653,NM_178019	chr5,chr5	-,+	PITX1,CATSPER3	1416,-64737
chr1:16326871-16327799	chr1	+	16327224	16327670	True	NM_014424,NM_178840	chr1,chr1	-,+	HSPB7,C1orf64	17665,3060
chr9:14898459-14899144	chr9	+	14898980	14899170	True	NR_003920,NM_144966	chr9,chr9	+,-	LOC389705,FREM1	94154,11873
chr15:76351359-76351654	chr15	+	76351395	76351668	True	NM_152335,NM_138573	chr15,chr15	+,-	C15orf27,NRG4	630,-46610
chr21:34443907-34444362	chr21	+	34444086	34444368	True	NR_024102,NM_138983	chr21,chr21	-,+	C21orf54,OLIG1	98223,-1687
chr19:39420571-39421033	chr19	+	39420571	39421079	True	NM_017827,NM_001145901,NM_021107,NM_033362,NM_033363	chr19,chr19,chr19,chr19,chr19	-,-,+,+,+	SARS2,SARS2,MRPS12,MRPS12,MRPS12	507,507,514,268,514
chr6:158588424-158588901	chr6	+	158588583	158588929	True	NM_207118,NM_032861	chr6,chr6	+,-	GTF2H5,SERAC1	449,433
chr1:14027601-14028086	chr1	+	14027681	14028125	True	NM_015866,NM_001135610,NM_012231,NM_001010847	chr1,chr1,chr1,chr1	+,+,+,-	PRDM2,PRDM2,PRDM2,LRRC38	3224,-1005,3224,-187439
chr10:103912919-103913588	chr10	+	103912993	103913392	True	NM_001113407,NM_004741	chr10,chr10	-,+	LDB1,NOLC1	-32783,-1124
chr3:32279946-32280167	chr3	+	32280026	32280098	True	NM_017784,NM_178868	chr3,chr3	-,+	OSBPL10,CMTM8	-256684,72
chr17:30453002-30453964	chr17	+	30453065	30453743	True	NM_001033566,NR_002222	chr17,chr17	+,-	RHOT1,ARGFXP2	15729,24897
chr5:79345134-79346607	chr5	+	79345150	79346638	True	NM_003248,NM_001167741	chr5,chr5	+,-	THBS4,MTX3	-14032,-58062
chr19:52897385-52899062	chr19	+	52897776	52898873	True	NM_001102657,NM_032423	chr19,chr19	-,+	ZNF836,ZNF528	-222880,2247
chr15:102192705-102193013	chr15	+	102192823	102192995	True	NM_078474,NM_025141,NM_001005326	chr15,chr15,chr15	-,-,+	TM2D3,TM2D3,OR4F6	-229,-229,152927
chr8:48651145-48651352	chr8	+	48651218	48651400	True	NM_005914,NM_005195	chr8,chr8	+,-	MCM4,CEBPD	221362,-492
chr1:111026164-111026607	chr1	+	111026239	111026547	True	NM_005549,NR_003599	chr1,chr1	-,+	KCNA10,CYMP	35300,-2902
chr19:39733392-39734450	chr19	+	39733914	39734286	True	NM_172139,NM_172138	chr19,chr19	-,+	IL28B,IL28A	1375,24870
chr17:683905-684319	chr17	+	683998	684140	True	NM_018146,NM_016080	chr17,chr17	+,-	RNMTL1,GLOD4	1372,1491
chr9:116344783-116345148	chr9	+	116344825	116345164	True	NM_017443,NM_021106	chr9,chr9	-,+	POLE3,RGS3	-171796,-1936
chr20:23669597-23670045	chr20	+	23669941	23670021	True	NM_001899,NR_001279	chr20,chr20	-,+	CST4,CSTT	-279,-170209
chr20:23669597-23670045	chr20	+	23731838	23732367	False	NM_001898,NR_001279	chr20,chr20	-,+	CST1,CSTT	-264,-232106
chr7:155434884-155436136	chr7	+	155434911	155436185	True	NM_001103176,NM_053043	chr7,chr7	-,+	CNPY1,RBM33	-108372,1017
chr5:139722233-139723577	chr5	+	139722263	139723419	True	NM_001945,NM_031467	chr5,chr5	-,+	HBEGF,SLC4A9	2819,16367
chr9:89758830-89760577	chr9	+	89759111	89760508	True	NR_036691,NM_001001709	chr9,chr9	-,+	LOC494127,C9orf170	-58971,3050
chr16:526440-526699	chr16	+	526455	526617	True	NR_024121,NM_001142272	chr16,chr16	-,+	NCRNA00235,RAB11FIP3	50840,-1656
chr9:36258582-36259816	chr9	+	36258748	36259588	True	NM_001190383,NM_007096,NM_001190384,NM_005476	chr9,chr9,chr9,chr9	-,+,-,-	GNE,CLTA,GNE,GNE	-252,-67946,-252,-252
chr19:1884899-1885140	chr19	+	1884925	1885159	True	NM_079834,NM_001130111,NM_031213	chr19,chr19,chr19	+,-,-	SCAMP4,FAM108A1,FAM108A1	20213,409,409
chr19:38807938-38809347	chr19	+	38807988	38809314	True	NM_001145462,NM_001145461,NM_001039671,NM_001039672,NM_001039673,NM_033557,NM_001145463,NM_004823	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,+	YIF1B,YIF1B,YIF1B,YIF1B,YIF1B,YIF1B,YIF1B,KCNK6	-1543,-1543,-1543,-1382,-1382,-7479,-1382,1169
chr10:45647742-45649348	chr10	+	45647976	45649326	True	NR_033891,NR_024472	chr10,chr10	+,-	LOC338579,LOC100133308	783,769
chr2:24583719-24584159	chr2	+	24583776	24584208	True	NM_001040710,NM_006277,NM_019595,NM_147152	chr2,chr2,chr2,chr2	+,-,-,-	C2orf84,ITSN2,ITSN2,ITSN2	-185855,-379,-379,-379
chr12:51568047-51568806	chr12	+	51568084	51568609	True	NM_005653,NM_001136264,NM_001173453,NM_001173452	chr12,chr12,chr12,chr12	-,+,-,-	TFCP2,DAZAP2,TFCP2,TFCP2	-1158,63898,-1158,-1158
chr9:34629002-34629254	chr9	+	34629025	34629275	True	NM_000155,NM_001017363,NM_147157,NM_024348,NM_007234,NM_005866	chr9,chr9,chr9,chr9,chr9,chr9	+,-,-,-,-,-	GALT,ARID3C,SIGMAR1,DCTN3,DCTN3,SIGMAR1	17359,-1014,8543,-8529,-8529,8543
chr11:60988875-60989584	chr11	+	60989160	60989253	True	NM_017966,NM_001079808	chr11,chr11	-,+	VPS37C,PGA4	-60244,567
chr11:60988875-60989584	chr11	+	60970413	60970506	False	NM_001079807,NM_017966	chr11,chr11	+,-	PGA3,VPS37C	477,-41497
chr17:33914178-33914401	chr17	+	33914191	33914389	True	NM_001282,NM_001030006,NM_000286	chr17,chr17,chr17	+,+,-	AP2B1,AP2B1,PEX12	-22,-22,-8535
chr20:35402049-35402265	chr20	+	35402048	35402280	True	NM_080628,NM_024918,NM_001145317,NM_001145316,NM_001145315,NM_001145318	chr20,chr20,chr20,chr20,chr20,chr20	+,-,-,-,-,-	C20orf118,DSN1,DSN1,DSN1,DSN1,DSN1	102289,8,0,8,0,0
chr17:80408791-80409837	chr17	+	80408868	80409471	True	NM_012336,NM_001193655,NM_001193654,NM_001193657,NM_031968,NM_001193653,NM_001083608,NM_001033046,NM_001100408,NR_036514,NR_036517,NR_036516,NR_036519,NR_036518,NM_001038618,NM_001100407	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,-,+,-,+,-,-,-,-,-,-,-,+,-	NARF,C17orf62,C17orf62,C17orf62,NARF,C17orf62,NARF,C17orf62,C17orf62,C17orf62,C17orf62,C17orf62,C17orf62,C17orf62,NARF,C17orf62	7068,-1266,-161,-161,7068,-161,7068,-161,-161,-161,-161,-161,-161,-161,6588,-161
chrX:33316099-33316990	chrX	+	33316229	33317003	True	NM_152631,NM_000109	chrX,chrX	+,-	FAM47B,DMD	1643909,40773
chr17:42150164-42151996	chr17	+	42150297	42151932	True	NR_028581,NR_028582,NM_138387,NM_152344	chr17,chr17,chr17,chr17	+,+,+,-	G6PC3,G6PC3,G6PC3,LSM12	-2250,-2250,-2250,-5310
chrX:131520766-131521107	chrX	+	131520776	131520978	True	NM_001042452,NM_001170701	chrX,chrX	+,-	MST4,MBNL3	-363191,26675
chr7:43792175-43794096	chr7	+	43792247	43793805	True	NM_000712,NM_018224	chr7,chr7	+,-	BLVRA,C7orf44	4466,-23164
chr6:33284240-33284486	chr6_qbl_hap6	+	4516489	4516775	False	NM_001145338,NM_001350,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	1241,6317,6317,-26885,1034,-2079,-2079,-2079,6317
chr6:33284240-33284486	chr6_mcf_hap5	+	4757985	4758271	False	NM_001145338,NM_001350,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	1241,6314,6314,-26880,1034,-2079,-2079,-2079,6314
chr6:33284240-33284486	chr6_cox_hap2	+	4728055	4728341	False	NM_001145338,NM_001350,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	1243,6320,6320,-26880,1036,-2079,-2079,-2079,6320
chr6:33284240-33284486	chr6	+	33284243	33284529	True	NM_001145338,NM_001350,NR_024517,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	1240,6314,6314,6314,-26882,1033,-2079,-2079,-2079,6314
chr6:33284240-33284486	chr6_dbb_hap3	+	4565566	4565852	False	NM_001145338,NM_001350,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	1241,6318,6318,-26879,1034,-2079,-2079,-2079,6318
chr15:85427660-85429031	chr15	+	85427724	85429031	True	NM_201651,NM_004213,NM_014300	chr15,chr15,chr15	+,+,-	SLC28A1,SLC28A1,SEC11A	-12,-12,-168050
chr14:75643030-75643252	chr14	+	75643091	75643267	True	NM_006827,NM_005252	chr14,chr14	-,+	TMED10,FOS	132,102213
chr3:36806619-36807741	chr3	+	36806635	36807683	True	NM_000249,NM_033403	chr3,chr3	+,-	MLH1,DCLK3	227157,-25283
chr10:7660225-7661652	chr10	+	7660339	7661623	True	NM_002216,NM_032817	chr10,chr10	+,-	ITIH2,ITIH5	83612,63
chr1:153962222-153962835	chr1	+	153962419	153962548	True	NM_002870,NM_001030	chr1,chr1	-,+	RAB13,RPS27	-3613,690
chr1:114697723-114698024	chr1	+	114697848	114698040	True	NM_205848,NM_020190	chr1,chr1	-,+	SYT6,OLFML3	-1376,-175869
chr19:15833732-15833938	chr19	+	15833755	15833963	True	NM_013939,NR_033864	chr19,chr19	+,-	OR10H2,CYP4F24P	4870,56885
chr17:39020098-39021153	chr17	+	39020338	39021116	True	NM_000223,NM_001195386	chr17,chr17	-,+	KRT12,TMEM99	2396,-44959
chr2:39449003-39449585	chr2	+	39449012	39449338	True	NR_037875,NM_001009565	chr2,chr2	+,-	LOC728730,CDKL4	215218,7395
chr4:10644967-10646617	chr4	+	10645183	10646617	True	NR_030298,NM_052964	chr4,chr4	+,-	MIR572,CLNK	723833,39820
chr2:170217811-170218273	chr2	+	170217962	170218322	True	NM_152384,NM_004525	chr2,chr2	+,-	BBS5,LRP2	117683,850
chr9:131590092-131590494	chr9	+	131590220	131590497	True	NM_016390,NM_004435	chr9,chr9	-,+	C9orf114,ENDOG	1639,-9506
chr9:139762809-139763428	chr9	+	139762968	139763372	True	NM_003792,NM_153200,NM_206920	chr9,chr9,chr9	-,-,+	EDF1,EDF1,MAMDC4	-2230,-2230,-16200
chr11:8615826-8616547	chr11	+	8615951	8616547	True	NM_000990,NM_030906	chr11,chr11	+,-	RPL27A,STK33	87447,-448
chr8:30054472-30056029	chr8	+	30054859	30055759	True	NM_006571,NM_001100916	chr8,chr8	+,-	DCTN6,MBOAT4	-41097,-52659
chr1:192602282-192602638	chr1	+	192602336	192602630	True	NM_002927,NM_001199261,NM_144766	chr1,chr1,chr1	+,-,+	RGS13,UCHL5,RGS13	2637,425953,2637
chr1:248147292-248148583	chr1	+	248147321	248148307	True	NM_001001959,NR_002145	chr1,chr1	-,+	OR11L1,OR2L1P	-142123,5261
chr1:116198060-116199435	chr1	+	116198106	116199470	True	NM_001232,NM_001172412	chr1,chr1	-,+	CASQ2,VANGL1	112006,-12915
chr11:49212011-49212584	chr11	+	49212073	49212589	True	NM_001014986,NR_027044	chr11,chr11	-,+	FOLH1,LOC440040	17689,367490
chr11:49212011-49212584	chr11	-	89387742	89387805	False	NM_153696,NM_001143837	chr11,chr11	+,-	FOLH1B,NOX4	4659,-64963
chr3:44664650-44665638	chr3	+	44664770	44665315	True	NM_001024855,NM_020696,NM_006991	chr3,chr3,chr3	+,-,+	ZNF197,KIAA1143,ZNF197	1195,137909,1195
chr18:11850257-11851208	chr18	+	11850297	11851149	True	NM_023075,NM_020412	chr18,chr18	-,+	MPPE1,CHMP1B	57543,239
chr20:18120340-18120982	chr20	+	18120384	18121019	True	NR_028402,NM_020536,NM_001164811,NM_021220	chr20,chr20,chr20,chr20	+,+,+,-	CSRP2BP,CSRP2BP,PET117,OVOL2	4723,1848,-1937,-81863
chr11:67375144-67375417	chr11	+	67375225	67375422	True	NM_007103,NR_033791,NM_001166102	chr11,chr11,chr11	+,-,+	NDUFV1,DOC2GP,NDUFV1	-953,7764,-953
chr11:65816983-65817817	chr11	+	65817133	65817753	True	NM_033036,NM_006842	chr11,chr11	-,+	GAL3ST3,SF3B2	-482,2062
chr12:7033317-7033799	chr12	+	7033411	7033783	True	NM_001940,NM_001007026,NR_003010,NM_001975	chr12,chr12,chr12,chr12	+,+,-,+	ATN1,ATN1,SCARNA12,ENO2	3696,38,43036,-9855
chr2:219926118-219926436	chr2	+	219926133	219926451	True	NR_024385,NM_002181,NR_036081	chr2,chr2,chr2	+,-,-	LOC151300,IHH,MIR3131	-85178,-895,-2661
chr9:6717292-6718806	chr9	+	6717592	6718341	True	NM_000170,NM_001146696	chr9,chr9	-,+	GLDC,KDM4C	-71900,2521
chr12:102208421-102209110	chr12	+	102208618	102209157	True	NM_018370,NM_024312	chr12,chr12	+,-	DRAM1,GNPTAB	61947,15539
chr5:13940269-13940720	chr5	+	13940292	13940644	True	NM_007118,NM_001369	chr5,chr5	+,-	TRIO,DNAH5	203184,3995
chr16:23651371-23652121	chr16	+	23651572	23652105	True	NM_001199011,NM_032486,NR_037573,NM_001199743,NM_024675	chr16,chr16,chr16,chr16,chr16	+,+,+,+,-	DCTN5,DCTN5,DCTN5,DCTN5,PALB2	581,581,581,581,623
chr4:186738190-186738736	chr4	+	186738229	186738705	True	NM_001145670,NM_001145671,NM_001145672,NM_003603,NM_003265	chr4,chr4,chr4,chr4,chr4	-,-,-,-,+	SORBS2,SORBS2,SORBS2,SORBS2,TLR3	-4819,-6004,-6181,-4837,251603
chr13:102043247-102044473	chr13	+	102043716	102044501	True	NM_052867,NM_004791	chr13,chr13	-,+	NALCN,ITGBL1	24363,60464
chr19:17186033-17186263	chr19	+	17186142	17186288	True	NM_001130065,NM_001011699,NM_004145,NM_033417	chr19,chr19,chr19,chr19	+,-,+,-	MYO9B,HAUS8,MYO9B,HAUS8	302,105,302,105
chr1:27227107-27227338	chr1	+	27227147	27227383	True	NM_022078,NM_006600	chr1,chr1	-,+	GPATCH3,NUDC	-185,20840
chr15:58359360-58361121	chr15	+	58359382	58361168	True	NM_170696,NM_020980,NM_003888	chr15,chr15,chr15	-,+,-	ALDH1A2,AQP9,ALDH1A2	-1476,69239,-1476
chr6:161065264-161066484	chr6	+	161066023	161066377	True	NM_001168338,NM_005577	chr6,chr6	+,-	PLG,LPA	56847,21080
chr6:161065264-161066484	chr6	+	161060476	161060830	False	NM_001168338,NM_005577	chr6,chr6	+,-	PLG,LPA	62394,26627
chr6:161065264-161066484	chr6	+	161038293	161038647	False	NM_001168338,NM_005577	chr6,chr6	+,-	PLG,LPA	84577,48810
chr6:161065264-161066484	chr6	+	161043839	161044193	False	NM_001168338,NM_005577	chr6,chr6	+,-	PLG,LPA	79031,43264
chr6:161065264-161066484	chr6	+	161049383	161049737	False	NM_001168338,NM_005577	chr6,chr6	+,-	PLG,LPA	73487,37720
chr14:23845291-23845817	chr14	+	23845292	23845653	True	NM_022789,NM_138460,NM_032459,NM_172314,NM_001037288	chr14,chr14,chr14,chr14,chr14	+,+,-,+,+	IL25,CMTM5,EFS,IL25,CMTM5	-3273,363,-10450,-3325,363
chr18:77713476-77714135	chr18	+	77713521	77713667	True	NM_001136180,NM_001146343,NM_001146345,NM_025078	chr18,chr18,chr18,chr18	+,-,-,-	HSBP1L1,PQLC1,PQLC1,PQLC1	10914,-1868,-1868,-1868
chrX:152009953-152011136	chrX	+	152009964	152010889	True	NM_004344,NM_015922	chrX,chrX	-,+	CETN2,NSDHL	-10663,-10504
chr19:18305690-18305892	chr19	+	18305764	18305922	True	NM_002866,NM_032683	chr19,chr19	-,+	RAB3A,MPV17L2	9002,-1775
chr17:66286369-66286584	chr17	+	66286399	66286601	True	NM_004694,NM_001174166,NM_014960	chr17,chr17,chr17	-,-,+	SLC16A6,SLC16A6,ARSG	854,854,-31136
chrX:153198268-153199560	chrX	+	153198519	153199521	True	NM_003491,NM_001164741,NM_001666,NM_001146151	chrX,chrX,chrX,chrX	-,-,-,+	NAA10,ARHGAP4,ARHGAP4,AVPR2	997,-6805,-6805,-28048
chr2:234653037-234654233	chr2	+	234653036	234654252	True	NR_037695,NR_037694,NR_037696,NM_001001394,NM_000463,NM_019093	chr2,chr2,chr2,chr2,chr2,chr2	-,-,-,-,+,+	LOC100286922,LOC100286922,LOC100286922,DNAJB3,UGT1A1,UGT1A3	9789,9789,9789,-375,14666,-15321
chr6:27525800-27527497	chr6	+	27525809	27526579	True	NM_001076781,NM_007149	chr6,chr6	+,-	ZNF391,ZNF184	-169336,-84912
chr8:18868420-18870070	chr8	+	18868432	18869667	True	NM_001174160,NM_015310	chr8,chr8	+,-	SH2D4A,PSD3	301413,1579
chr10:85899690-85900042	chr10	+	85899752	85900080	True	NM_001017924,NM_014394	chr10,chr10	-,+	LRIT2,GHITM	85254,-618
chr15:49083058-49084452	chr15	+	49083152	49084200	True	NM_014335,NM_001194998	chr15,chr15	+,-	EID1,CEP152	86089,19205
chr2:238396986-238397311	chr2	+	238397092	238397324	True	NM_001042467,NM_024101,NM_057165	chr2,chr2,chr2	+,+,-	MLPH,MLPH,COL6A3	-1265,-1265,-74242
chr15:45670955-45671244	chr15	+	45670988	45671207	True	NM_001482,NR_033252	chr15,chr15	-,+	GATM,LOC145663	-8,-141
chr8:22525238-22526305	chr8	+	22525272	22526120	True	NM_018688,NM_021174	chr8,chr8	-,+	BIN3,KIAA1967	591,-62784
chr2:52799448-52799674	chr2	+	52799464	52799684	True	NM_001201965,NM_001008708	chr2,chr2	-,+	ASB3,CHAC2	1214351,1195244
chrX:140786625-140787452	chrX	+	140786707	140787224	True	NM_145665,NM_013453,NM_032417	chrX,chrX,chrX	-,+,-	SPANXE,SPANXA1,SPANXD	-52,-108899,-109
chr2:161350783-161351390	chr2	+	161350818	161351407	True	NM_002897,NM_133484,NM_016836	chr2,chr2,chr2	-,+,-	RBMS1,TANK,RBMS1	-500,642058,-500
chr11:286043-286732	chr11	+	286110	286734	True	NM_138329,NM_001025295,NM_025092	chr11,chr11,chr11	+,-,+	NLRP6,IFITM5,ATHL1	-7591,12842,2403
chr11:123886714-123888231	chr11	+	123886852	123888282	True	NM_001001953,NM_001004463,NM_001004462	chr11,chr11,chr11	+,-,+	OR10G9,OR10G7,OR10G4	5437,21484,-621
chr17:16119265-16119534	chr17	+	16119314	16119528	True	NM_006311,NM_004278	chr17,chr17	-,+	NCOR1,PIGL	-440,980
chr1:47695437-47696183	chr1	+	47695463	47696056	True	NM_001010969,NM_003189	chr1,chr1	+,-	CYP4A22,TAL1	-92407,-20
chrX:107302998-107303770	chrX	+	107302998	107303783	True	NM_002814,NM_182607	chrX,chrX	-,+	PSMD10,VSIG1	31142,-14857
chr7:117510838-117512324	chr7	+	117510837	117512038	True	NM_033427,NM_016200	chr7,chr7	-,+	CTTNBP2,NAA38	1573,312047
chr22:37099276-37099479	chr22	+	37099332	37099506	True	NM_006078,NM_000631	chr22,chr22	-,+	CACNG2,NCF4	-642,157523
chr21:31692148-31693751	chr21	+	31692193	31693806	True	NM_181599,NM_203405	chr21,chr21	+,-	KRTAP13-1,KRTAP26-1	74585,52
chr15:72564933-72565301	chr15	+	72564961	72565313	True	NM_020214,NR_027262	chr15,chr15	-,+	PARP6,C15orf34	-1333,103140
chr2:132381870-132383766	chr2	+	132382196	132383605	True	NR_033885,NM_001085365	chr2,chr2	+,-	POTEKP,MZT2A	-32979,-132132
chr20:17549445-17549680	chr20	+	17549496	17549667	True	NM_001011546,NM_001161705,NM_006870	chr20,chr20,chr20	+,-,+	DSTN,BFSP1,DSTN	931,-9891,931
chr9:130743661-130744636	chr9	+	130743812	130744446	True	NM_001035254,NM_001006641	chr9,chr9	-,+	FAM102A,SLC25A25	-1000,86032
chr8:24814201-24815015	chr8	+	24814453	24815063	True	NM_006158,NM_001105541	chr8,chr8	-,+	NEFL,NEFM	-322,-42049
chr19:57627550-57627972	chr19	+	57627625	57627865	True	NM_020903,NM_052882	chr19,chr19	+,-	USP29,ZIM3	3643,28762
chr12:113382292-113382971	chr12	+	113382387	113382845	True	NM_001193521,NM_006187	chr12,chr12	-,+	RASAL1,OAS3	190766,-6189
chrX:138773643-138773988	chrX	+	138773673	138773873	True	NM_001099855,NM_000133	chrX,chrX	-,+	MCF2,F9	16558,-160829
chr17:8335793-8337625	chr17	+	8336031	8337468	True	NM_030808,NM_001146684,NM_001025579	chr17,chr17,chr17	+,-,+	NDEL1,RNF222,NDEL1	1710,-34887,1710
chr3:195945012-195946168	chr3	+	195945021	195945785	True	NM_001039617,NM_152672	chr3,chr3	-,+	ZDHHC19,OSTalpha	-6721,-1689
chr7:26444442-26445858	chr7	+	26444477	26445708	True	NR_022006,NR_015364	chr7,chr7	-,+	KIAA0087,LOC441204	132786,-1421
chr2:220175076-220175776	chr2	+	220175110	220175574	True	NM_001199764,NM_001199763,NM_006736,NM_002846	chr2,chr2,chr2,chr2	-,-,+,-	PTPRN,PTPRN,DNAJB2,PTPRN	-1381,-815,-31121,-815
chrX:148771700-148772419	chrX	+	148771717	148772419	True	NM_001011544,NM_032508	chrX,chrX	+,-	MAGEA11,TMEM185A	-1865,-58230
chr17:2498008-2498474	chr17	+	2498024	2498514	True	NM_000430,NM_024086	chr17,chr17	+,-	PAFAH1B1,METTL16	-1152,-82824
chr9:133529382-133530719	chr9	+	133530165	133530623	True	NR_027440,NM_021619	chr9,chr9	-,+	LOC100272217,PRDM12	-75284,9357
chr19:59074293-59074614	chr19	+	59074300	59074576	True	NM_198426,NR_027334,NM_003969,NM_014453	chr19,chr19,chr19,chr19	-,+,-,-	CHMP2A,LOC100131691,UBE2M,CHMP2A	-7945,-3798,-3957,-7814
chr1:64668498-64669321	chr1	+	64668604	64669142	True	NM_152489,NM_014288	chr1,chr1	+,-	UBE2U,ITGB3BP	347,-679769
chr15:65477777-65477996	chr15	+	65477796	65478036	True	NM_001101362,NM_006660	chr15,chr15	+,-	KBTBD13,CLPX	-108693,-233
chr9:99801973-99802447	chr9	+	99801995	99802403	True	NM_001333,NM_001045477,NM_001201575	chr9,chr9,chr9	-,+,-	CTSL2,FAM22G,CTSL2	-403,-110760,-70
chr9:92219843-92220072	chr9	+	92219994	92220072	True	NM_006705,NM_006378	chr9,chr9	+,-	GADD45G,SEMA4D	-118,-125383
chrX:346162-347188	chrY	+	296175	297139	False	NR_027232,NM_013239	chrY,chrY	+,-	NCRNA00107,PPP2R3B	-64841,601
chrX:346162-347188	chrX	+	346175	347139	True	NR_027232,NM_013239	chrX,chrX	+,-	NCRNA00107,PPP2R3B	-64841,601
chr2:128844450-128845182	chr2	+	128844449	128845014	True	NM_024545,NM_020120,NR_027671	chr2,chr2,chr2	-,+,+	SAP130,UGGT1,UGGT1	-59580,3739,3767
chr11:134096173-134097535	chr11	+	134096374	134097407	True	NM_015261,NM_052875	chr11,chr11	-,+	NCAPD3,VPS26B	-1948,-1871
chr20:31261474-31263435	chr20	+	31261476	31263469	True	NM_006892,NR_034152,NM_182584	chr20,chr20,chr20	+,+,-	DNMT3B,LOC149950,C20orf203	86721,-86246,-21693
chr2:241501948-241502709	chr2	+	241501953	241502616	True	NM_016552,NM_017844,NM_001033575,NM_018226	chr2,chr2,chr2,chr2	-,-,+,+	ANKMY1,ANKMY1,DUSP28,RNPEPL1	-4548,-4548,-2534,5387
chr20:6750107-6750437	chr20	+	6750191	6750473	True	NM_017671,NM_001200	chr20,chr20	-,+	FERMT1,BMP2	-646000,-1497
chr6:133071852-133073842	chr6	+	133071958	133073837	True	NR_034175,NR_034174,NM_004665,NR_034173,NM_001016	chr6,chr6,chr6,chr6,chr6	-,-,-,-,+	VNN2,VNN2,VNN2,VNN2,RPS12	5236,5236,5247,5236,61870
chr9:115508763-115510198	chr9	+	115509138	115510068	True	NM_001012994,NM_021218	chr9,chr9	+,-	SNX30,C9orf80	3065,-28751
chr12:56847333-56847607	chr12	+	56847417	56847605	True	NM_003920,NM_012064,NM_207344	chr12,chr12,chr12	-,-,+	TIMELESS,MIP,SPRYD4	-4217,880,14695
chr22:39183919-39184685	chr22	+	39183995	39184696	True	NM_005740,NM_004286	chr22,chr22	-,+	DNAL4,GTPBP1	5515,-82239
chrX:128915301-128915800	chrX	+	128915502	128915714	True	NM_001008222,NM_018990	chrX,chrX	-,+	ZDHHC9,SASH3	61897,-1661
chr8:95491559-95492055	chr8	+	95491751	95492091	True	NM_001205262,NM_012415,NM_001034915	chr8,chr8,chr8	-,-,+	RAD54B,RAD54B,ESRP1	-4408,-4408,161272
chr2:132287003-132288234	chr2	+	132287037	132288233	True	NM_001085365,NM_138770	chr2,chr2	-,+	MZT2A,CCDC74A	-36973,-1596
chr2:132287003-132288234	chr2	-	130899872	130899922	False	NM_207310,NR_033903	chr2,chr2	-,+	CCDC74B,LOC285103	2759,-12727
chr1:145472551-145473081	chr1	+	145472636	145473130	True	NM_001039888,NM_032305,NM_153713	chr1,chr1,chr1	+,-,+	ANKRD34A,POLR3GL,LIX1L	-2179,-2249,3954
chr3:11759108-11759627	chr3	+	11759286	11759510	True	NM_014667,NM_003178	chr3,chr3	-,+	VGLL4,SYN2	2766,286351
chr21:46844963-46845166	chr21	+	46844997	46845167	True	NM_130445,NR_028082,NR_027498	chr21,chr21,chr21	+,-,-	COL18A1,NCRNA00175,NCRNA00175	-19951,-42,-12
chr2:238536803-238538273	chr2	+	238536930	238537964	True	NM_001137550,NR_033308	chr2,chr2	+,-	LRRFIP1,RAB17	-757,-37161
chrX:100878791-100878997	chrX	+	100878842	100878998	True	NM_019007,NM_001009584,NM_001184768,NR_033670,NM_016607,NM_177948,NM_177947,NR_033669	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,+,+,+,-	ARMCX6,ARMCX6,ARMCX6,ARMCX6,ARMCX3,ARMCX3,ARMCX3,ARMCX6	-5851,-5851,-5851,-5851,-774,-543,-774,-5851
chr4:47077353-47079195	chr4	+	47077414	47079213	True	NM_000809,NM_000812	chr4,chr4	-,+	GABRA4,GABRB1	-80990,-44177
chr9:4143421-4144946	chr9	+	4143766	4144971	True	NR_026663,NM_152629	chr9,chr9	+,-	C9orf70,GLIS3	-245171,7263
chr16:89986353-89986881	chr16	+	89986367	89986793	True	NM_002386,NM_145039,NM_001197181,NM_006086	chr16,chr16,chr16,chr16	+,-,+,+	MC1R,CENPBD1,TUBB3,TUBB3	-2131,52497,1623,2893
chr19:42461533-42462609	chr19	+	42461637	42462502	True	NM_006423,NM_199002	chr19,chr19	-,+	RABAC1,ARHGEF1	1076,-73253
chr9:130497747-130498614	chr9	+	130497817	130498349	True	NM_130459,NM_144965,NM_001085347,NM_001134430,NM_001134431	chr9,chr9,chr9,chr9,chr9	-,+,-,-,-	TOR2A,TTC16,TOR2A,TOR2A,TOR2A	-213,-19513,-213,-213,-213
chr17:3750235-3750573	chr17	+	3750274	3750622	True	NM_018553,NM_031965,NM_001114118	chr17,chr17,chr17	-,+,-	C17orf85,GSG2,C17orf85	-734,-123128,-734
chr19:57110113-57111220	chr19	+	57110127	57110863	True	NM_021216,NM_001005850	chr19,chr19	+,-	ZNF71,ZNF835	-3514,73438
chr18:51884987-51886080	chr18	+	51885005	51886107	True	NM_173529,NM_139171	chr18,chr18	+,-	C18orf54,STARD6	-87,-4062
chr16:67695527-67695889	chr16	+	67695631	67695879	True	NM_016948,NM_001082487,NM_001082486,NM_022914,NM_001012984,NM_032140,NM_001037281	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,-,+,-,+	PARD6A,ACD,ACD,ACD,C16orf86,C16orf48,PARD6A	-831,-913,-913,-913,4837,4799,-831
chr13:42874172-42875222	chr13	+	42874218	42875243	True	NM_016248,NM_001009814	chr13,chr13	+,-	AKAP11,KIAA0564	-27981,-338997
chr12:6939147-6939827	chr12	+	6939225	6939815	True	NM_014262,NM_031299,NM_002075,NM_019858,NM_014449	chr12,chr12,chr12,chr12,chr12	+,-,+,+,+	LEPREL2,CDCA3,GNB3,GPR162,GPR162	-1704,20691,9559,-8313,-8313
chrX:105855035-105855397	chrX	+	105855043	105855325	True	NM_001184782,NM_018015,NM_001171706	chrX,chrX,chrX	+,+,-	CXorf57,CXorf57,RIPPLY1	46,46,291286
chr12:58006763-58007088	chr12	+	58006842	58007136	True	NM_001111270,NM_182947,NM_001478,NM_178502,NM_133489	chr12,chr12,chr12,chr12,chr12	+,+,-,+,+	ARHGEF25,ARHGEF25,B4GALNT1,DTX3,SLC26A10	-2930,-1675,19899,-8289,6556
chrY:27767873-27769137	chrY	+	27768360	27768925	True	NM_004680,NR_002179,NM_001003895,NM_001003894,NM_170723	chrY,chrY,chrY,chrY,chrY	+,-,+,+,+	CDY1,TTTY17C,CDY1B,CDY1B,CDY1	-147,-437440,-147,-147,-147
chrY:27767873-27769137	chrY	-	26193499	26194064	False	NM_004680,NM_001003895,NM_001003894,NR_001526,NM_170723	chrY,chrY,chrY,chrY,chrY	-,-,-,+,-	CDY1,CDY1B,CDY1B,TTTY17A,CDY1	147,147,147,437414,147
chrY:27767873-27769137	chrY	-	19991787	19991959	False	NM_004825,NM_001001722	chrY,chrY	-,-	CDY2A,CDY2B	191,190
chrY:27767873-27769137	chrY	+	20137807	20137979	False	NM_004825,NM_001001722	chrY,chrY	+,+	CDY2A,CDY2B	-191,-190
chr15:72101736-72102737	chr15	+	72101739	72102725	True	NM_014249,NM_016346,NM_006901	chr15,chr15,chr15	+,+,-	NR2E3,NR2E3,MYO9A	168,168,307747
chr3:119921266-119922630	chr3	+	119921787	119922655	True	NM_001168271,NM_001168331	chr3,chr3	-,+	GPR156,NDUFB4	40537,392472
chr5:38419983-38421076	chr5	+	38420248	38421014	True	NM_001127671,NM_182799	chr5,chr5	-,+	LIFR,EGFLAM	135784,-16649
chr17:28562726-28563000	chr17	+	28562731	28562846	True	NR_029945,NM_001045	chr17,chr17	+,-	MIR423,SLC6A4	-118685,163
chr17:43238276-43238665	chr17	+	43238276	43238712	True	NM_144608,NM_133373	chr17,chr17	+,-	HEXIM2,PLCD3	-63,-28385
chr9:138987931-138989145	chr9	+	138988058	138989040	True	NM_015597,NM_144653	chr9,chr9	+,-	GPSM1,NACC2	232891,-927
chrX:122319135-122319600	chrX	+	122319147	122319578	True	NM_007325,NM_000828,NM_001081550	chrX,chrX,chrX	+,+,-	GRIA3,GRIA3,THOC2	-1102,-1102,547383
chr3:32538731-32539071	chr3	+	32538903	32538971	True	NM_017801,NM_181472	chr3,chr3	-,+	CMTM6,CMTM7	5482,-105797
chr4:77121687-77123505	chr4	+	77121694	77122883	True	NM_001204255,NM_001136570	chr4,chr4	-,+	SCARB2,FAM47E	12224,49969
chr22:38451201-38451463	chr22	+	38451207	38451370	True	NM_013356,NM_001039584,NM_012407,NM_001039583	chr22,chr22,chr22,chr22	-,+,+,+	SLC16A8,PICK1,PICK1,PICK1	27851,1891,1891,1891
chr6:55443954-55444699	chr6	+	55444179	55444559	True	NM_207410,NM_019036,NM_001042406	chr6,chr6,chr6	+,-,-	GFRAL,HMGCLL1,HMGCLL1	-251963,-167,-167
chr3:45188826-45190065	chr3	+	45188852	45189903	True	NM_022842,NM_178181,NM_003278	chr3,chr3,chr3	-,-,+	CDCP1,CDCP1,CLEC3B	-938,-938,-121144
chr8:37619792-37620115	chr8	+	37620033	37620131	True	NR_003671,NM_007198	chr8,chr8	-,+	LOC728024,PROSC	-14469,1
chr16:67223694-67224987	chr16	+	67223852	67224976	True	NM_024712,NM_001950,NM_178516,NM_001040715	chr16,chr16,chr16,chr16	+,+,-,-	ELMO3,E2F4,EXOC3L1,KIAA0895L	8051,1091,-103,-5969
chr16:4166919-4167280	chr16	+	4167080	4167199	True	NM_001116,NM_032575	chr16,chr16	-,+	ADCY9,GLIS2	-894,215025
chr12:2113365-2113704	chr12	+	2113439	2113695	True	NM_000719,NM_152640	chr12,chr12	+,-	CACNA1C,DCP1B	48720,32
chr8:145014725-145015120	chr8	+	145014800	145015114	True	NM_000837,NR_030383,NM_201384,NM_201381,NM_201380,NM_201383,NM_201382	chr8,chr8,chr8,chr8,chr8,chr8,chr8	+,-,-,-,-,-,-	GRINA,MIR661,PLEC,PLEC,PLEC,PLEC,PLEC	49111,4383,-1042,3841,9980,1628,3046
chr20:3066451-3067096	chr20	+	3066672	3066881	True	NM_000490,NM_000915	chr20,chr20	-,+	AVP,OXT	-1302,-14457
chr7:11871841-11872071	chr7	+	11872033	11872119	True	NM_015204,NM_001134232	chr7,chr7	-,+	THSD7A,TMEM106B	-209,378728
chr11:71845722-71846492	chr11	+	71846013	71846531	True	NM_014042,NM_000804	chr11,chr11	-,+	C11orf51,FOLR3	-22191,239
chr11:71845722-71846492	chr11	+	71882584	71882654	False	NM_014042,NM_016724	chr11,chr11	-,+	C11orf51,FOLR1	-58762,17947
chr22:38594573-38595716	chr22	+	38594661	38595515	True	NM_001161573,NM_001161572,NM_001161574,NM_012323,NM_001199562	chr22,chr22,chr22,chr22,chr22	+,+,+,+,-	MAFF,MAFF,MAFF,MAFF,PLA2G6	3511,2423,2423,2423,-16825
chr8:145156612-145157266	chr8	+	145156638	145156996	True	NM_030974,NM_001916,NR_024207,NM_032272	chr8,chr8,chr8,chr8	-,+,+,+	SHARPIN,CYC1,KIAA1875,MAF1	2194,-6730,5632,2308
chr4:36185399-36186690	chr4	+	36185403	36186728	True	NM_015230,NM_001136536	chr4,chr4	-,+	ARAP2,DTHD1	59301,96515
chr1:217796044-217797831	chr1	+	217796236	217797578	True	NM_138796,NM_018040	chr1,chr1	+,-	SPATA17,GPATCH2	7116,6888
chr17:43138519-43138730	chr17	+	43138532	43138726	True	NM_021079,NM_001128631,NM_024819	chr17,chr17,chr17	+,-,-	NMT1,DCAKD,DCAKD	-47,-9554,-59
chr12:102090722-102091143	chr12	+	102090811	102091003	True	NM_020244,NM_001177948	chr12,chr12	+,-	CHPT1,SYCP3	413,42297
chr1:10093183-10095147	chr1	+	10093323	10094794	True	NM_001105562,NM_032368,NM_006048	chr1,chr1,chr1	+,-,+	UBE4B,LZIC,UBE4B	-333,-90497,-333
chr16:16023484-16023741	chr16	+	16023542	16023613	True	NM_144600,NM_004996	chr16,chr16	-,+	FOPNL,ABCC1	-41095,19820
chr16:14406714-14407723	chr16	+	14406873	14407643	True	NR_029854,NM_001134477,NR_030177	chr16,chr16,chr16	+,-,+	MIR365-1,PARN,MIR193B	-3782,316527,-9100
chr10:7747132-7747742	chr10	+	7747250	7747764	True	NM_001001851,NM_002216	chr10,chr10	-,+	ITIH5,ITIH2	-38289,-2066
chr7:6098959-6099244	chr7	+	6099018	6099228	True	NM_001134335,NM_032172,NM_014413	chr7,chr7,chr7	-,+,-	EIF2AK1,USP42,EIF2AK1	-158,45321,-158
chr1:90462220-90463091	chr1	+	90462394	90462897	True	NM_182976,NM_182975,NR_002830	chr1,chr1,chr1	+,+,-	ZNF326,ZNF326,GEMIN8P4	-1775,-1775,-1869
chr22:24384252-24385638	chr22	+	24384583	24385577	True	NM_001144931,NM_000853	chr22,chr22	+,-	LOC391322,GSTT1	-11518,-299
chr14:78227376-78227823	chr14	+	78227600	78227786	True	NM_174943,NM_001173978,NM_012245	chr14,chr14,chr14	+,+,-	C14orf178,C14orf178,SNW1	-478,-478,-103
chr2:239148907-239149173	chr2	+	239148922	239149160	True	NR_026925,NM_001142853,NR_026926,NM_018645,NR_026923	chr2,chr2,chr2,chr2,chr2	-,-,-,-,+	LOC151174,HES6,LOC151174,HES6,LOC643387	-8604,-241,-8604,-241,-8646
chr1:161088282-161088632	chr1	+	161088289	161088665	True	NM_012394,NM_001185094,NM_001185092,NM_005600,NM_001185093	chr1,chr1,chr1,chr1,chr1	-,+,+,+,+	PFDN2,NIT1,NIT1,NIT1,NIT1	-423,-434,-480,-480,-435
chr4:15651125-15651745	chr4	+	15651332	15651783	True	NM_001193534,NM_001193535,NM_012161,NM_001145191,NR_036464	chr4,chr4,chr4,chr4,chr4	-,-,-,+,-	FBXL5,FBXL5,FBXL5,FAM200B,FBXL5	5302,5302,5302,31568,5302
chr10:89103888-89104217	chr10	+	89104059	89104225	True	NR_024397,NR_029408	chr10,chr10	-,+	LOC728190,LOC439994	-1744,-1949
chr7:3335977-3336902	chr7	+	3336607	3336924	True	NM_152744,NM_032415	chr7,chr7	+,-	SDK1,CARD11	4155,-253098
chrX:18998848-18999377	chrX	+	18999261	18999393	True	NM_000292,NR_029379	chrX,chrX	-,+	PHKA2,LOC100132163	3137,-90898
chr16:56710688-56711449	chr16	+	56710738	56711466	True	NM_005952,NM_005950,NR_003669,NM_005951	chr16,chr16,chr16,chr16	+,-,+,+	MT1X,MT1G,MT1IP,MT1H	4915,-8761,-1140,-7063
chr2:227664909-227665217	chr2	+	227664925	227665259	True	NM_001167608,NM_005544	chr2,chr2	+,-	RHBDD1,IRS1	35411,-1419
chr7:150754504-150754985	chr7	+	150754648	150754900	True	NM_004769,NM_001164410,NM_020321,NM_020322,NM_001199693,NM_001199692,NM_003040,NM_004935,NM_001199694	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,-,+,+,+,+,+,-,+	ACCN3,CDK5,ACCN3,ACCN3,SLC4A2,SLC4A2,SLC4A2,CDK5,SLC4A2	-9094,202,-9094,-9094,4733,398,1756,202,4838
chr12:58137359-58138331	chr12	+	58137481	58138295	True	NM_005981,NM_001122772,NM_014770,NM_000075	chr12,chr12,chr12,chr12	+,-,-,-	TSPAN31,AGAP2,AGAP2,CDK4	488,-5452,-1541,7919
chr8:9923790-9924251	chr8	+	9923847	9924049	True	NR_029668,NM_012331	chr8,chr8	-,+	MIR124-1,MSRA	-162865,-12073
chr4:2063835-2064500	chr4	+	2063947	2064325	True	NM_005663,NM_178557	chr4,chr4	-,+	WHSC2,NAT8L	-52988,-2759
chr3:13009278-13009566	chr3	+	13009339	13009613	True	NM_014869,NM_012298	chr3,chr3	-,+	IQSEC1,CAND2	-379,-171219
chr19:7990151-7990365	chr19	+	7990171	7990359	True	NM_206833,NM_001195259,NM_003083,NR_030717	chr19,chr19,chr19,chr19	-,+,+,+	CTXN1,LOC645781,SNAPC2,SNAPC2	742,-9190,-5028,-4355
chr3:99794991-99795914	chr3	+	99795024	99795936	True	NM_001167924,NM_182909	chr3,chr3	+,-	C3orf26,FILIP1L	37837,37463
chr19:36340976-36342096	chr19	+	36341124	36342068	True	NM_199180,NM_004646,NM_032123,NM_199179	chr19,chr19,chr19,chr19	+,-,+,+	KIRREL2,NPHS1,KIRREL2,KIRREL2	5741,877,5741,5741
chr17:46125156-46125525	chr17	+	46125177	46125557	True	NM_003204,NM_016429	chr17,chr17	+,-	NFE2L1,COPZ2	128,-10025
chr2:169746402-169746893	chr2	+	169746484	169746772	True	NM_001081686,NM_020675	chr2,chr2	+,-	G6PC2,SPC25	10977,222
chr19:10491211-10491527	chr19	+	10491260	10491544	True	NM_001111307,NM_003331	chr19,chr19	+,-	PDE4A,TYK2	39788,-12
chr1:40914781-40915341	chr1	+	40914817	40915387	True	NM_023070,NM_001852	chr1,chr1	+,-	ZNF643,COL9A2	949,-131878
chr22:19005954-19006234	chr22	+	19006030	19006122	True	NR_024157,NR_026651,NR_024159	chr22,chr22,chr22	-,+,+	DGCR11,DGCR10,DGCR9	29816,4014,-734
chr14:54952890-54953877	chr14	+	54953356	54953773	True	NM_004124,NM_006568	chr14,chr14	-,+	GMFB,CGRRF1	2021,22813
chr1:17533681-17535397	chr1	+	17533804	17535414	True	NM_007365,NM_013358	chr1,chr1	-,+	PADI2,PADI1	-87856,-2234
chr17:57784327-57784810	chr17	+	57784347	57784815	True	NM_030938,NM_016077	chr17,chr17	+,-	VMP1,PTRH2	47,91
chr11:64106678-64107617	chr11	+	64106917	64107351	True	NM_032251,NM_016404	chr11,chr11	+,-	CCDC88B,TRMT112	338,-21884
chr19:52253217-52254929	chr19	+	52253337	52254511	True	NM_002029,NM_001193306,NM_001005738	chr19,chr19,chr19	-,-,+	FPR1,FPR1,FPR2	689,689,9941
chr19:51456483-51457247	chr19	+	51456535	51457010	True	NM_001077492,NM_012427,NM_005551,NM_001077491	chr19,chr19,chr19,chr19	-,-,+,-	KLK5,KLK5,KLK2,KLK5	-191,-191,-79897,-191
chr3:100322416-100324205	chr3	+	100322479	100324053	True	NM_032787,NM_014820	chr3,chr3	+,-	GPR128,TOMM70A	4379,-202254
chr15:83736836-83737206	chr15	+	83736890	83737261	True	NM_001011885,NM_001144903,NM_025238	chr15,chr15,chr15	-,+,-	BTBD1,TM6SF1,BTBD1	-784,39062,-784
chr3:183949476-183950489	chr3	+	183949714	183950380	True	NM_005787,NR_030410,NM_138345	chr3,chr3,chr3	-,+,+	ALG3,MIR1224,VWA5B2	16429,8812,-1448
chr7:151137199-151137497	chr7	+	151137421	151137495	True	NR_034013,NM_144727,NR_037468	chr7,chr7,chr7	+,-,-	LOC100131176,CRYGN,MIR3907	-31150,-322,-6696
chr17:79895911-79896121	chr17	+	79896006	79896168	True	NR_015454,NM_001145113,NM_153824,NM_006907	chr17,chr17,chr17,chr17	+,-,-,-	LOC92659,MYADML2,PYCR1,PYCR1	-10352,8991,-1038,-1038
chr19:49539691-49539936	chr19	+	49539745	49539975	True	NR_004383,NM_033378,NM_033377,NR_024244,NM_033043	chr19,chr19,chr19,chr19,chr19	+,+,-,-,+	SNAR-G1,CGB2,CGB1,SNAR-G2,CGB5	301,-4666,266,-4701,7126
chr4:71552325-71553171	chr4	+	71552324	71552725	True	NM_144646,NM_020368	chr4,chr4	-,+	IGJ,UTP3	-19976,1470
chr17:41151257-41152754	chr17	+	41151343	41152420	True	NM_000988,NM_001142654,NM_005533	chr17,chr17,chr17	+,-,+	RPL27,AARSD1,IFI35	-949,-18798,6321
chr9:219271-220811	chr9	+	219911	220674	True	NM_203447,NM_152569	chr9,chr9	+,-	DOCK8,C9orf66	-5097,-4018
chr8:99306605-99307937	chr8	+	99306727	99307565	True	NM_024759,NM_020697	chr8,chr8	-,+	NIPAL2,KCNS2	-106,131684
chr21:45978480-45979359	chr21	+	45978552	45979057	True	NM_198696,NM_198687,NM_198693	chr21,chr21,chr21	-,+,-	KRTAP10-3,KRTAP10-4,KRTAP10-2	-19,14548,-7164
chr22:17642168-17643714	chr22	+	17642944	17643740	True	NM_017829,NM_033070,NR_024482,NR_024483	chr22,chr22,chr22,chr22	-,-,+,+	CECR5,CECR5,CECR4,CECR4	2487,-2775,-2716,-2716
chr10:72542958-72544384	chr10	+	72542966	72544265	True	NM_003901,NM_152710	chr10,chr10	+,-	SGPL1,C10orf27	31438,942
chr21:37855608-37855999	chr21	+	37855644	37856048	True	NM_005441,NM_144492,NM_001146079	chr21,chr21,chr21	+,-,-	CHAF1B,CLDN14,CLDN14	-98006,-3256,-3256
chr6:160388965-160389874	chr6	+	160389087	160389779	True	NM_000876,NM_030752	chr6,chr6	+,-	IGF2R,TCP1	351,-178352
chr16:3933415-3933780	chr16	+	3933435	3933823	True	NM_005223,NM_004380,NM_001079846	chr16,chr16,chr16	+,-,-	DNASE1,CREBBP,CREBBP	-230559,-3314,-3314
chr19:10419302-10419996	chr19	+	10419340	10419915	True	NM_001031734,NM_001103167,NM_003259	chr19,chr19,chr19	-,-,+	FDX1L,ZGLP1,ICAM5	6831,373,-18736
chrX:16141979-16142184	chrX	+	16141978	16142160	True	NM_005314,NM_003916	chrX,chrX	+,-	GRPR,AP1S2	-616,-268878
chr17:61698530-61699006	chr17	+	61698532	61698963	True	NM_002401,NM_203351,NM_030576	chr17,chr17,chr17	+,+,-	MAP3K3,MAP3K3,LIMD2	837,837,78606
chr19:54702977-54703515	chr19	+	54702979	54703425	True	NM_001146056,NM_001146082,NM_001146083,NM_024075,NM_024298,NM_001013,NM_001077446	chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,+,-,+,+	MBOAT7,MBOAT7,MBOAT7,TSEN34,MBOAT7,RPS9,TSEN34	-9246,-9246,-9246,-8916,-9246,1300,-7931
chr5:61600735-61601173	chr5	+	61601052	61601159	True	NM_004520,NM_014473,NM_001098511	chr5,chr5,chr5	+,-,+	KIF2A,DIMT1L,KIF2A	829,98622,829
chr17:43662449-43662660	chr17	+	43662502	43662568	True	NR_026901,NR_037772	chr17,chr17	-,+	LOC644172,CRHR1	17230,35141
chr3:195664984-195666405	chr3	+	195665085	195666117	True	NR_034088,NM_005781	chr3,chr3	+,-	LOC401109,TNK2	203389,-29205
chrX:142724043-142724799	chrX	+	142724270	142724811	True	NM_001012989,NM_001184750,NM_001184749,NM_173078	chrX,chrX,chrX,chrX	+,-,-,-	UBE2NL,SLITRK4,SLITRK4,SLITRK4	242361,-1951,-344,-1251
chr3:30647376-30648147	chr3	+	30647380	30647891	True	NM_207359,NM_003242,NM_001024847	chr3,chr3,chr3	-,+,+	GADL1,TGFBR2,TGFBR2	288312,102,102
chr5:60944503-60946086	chr5	+	60944949	60946125	True	NM_001048249,NM_173667	chr5,chr5	-,+	C5orf43,FLJ37543	-486647,-11372
chr9:89697983-89698977	chr9	+	89698065	89698638	True	NR_036691,NM_001001709	chr9,chr9	-,+	LOC494127,C9orf170	1559,64920
chr1:155113156-155113534	chr1	+	155113217	155113393	True	NM_018973,NM_153741,NM_018845,NM_001122839,NM_001122837	chr1,chr1,chr1,chr1,chr1	-,-,+,+,+	DPM3,DPM3,SLC50A1,SLC50A1,SLC50A1	-334,-221,-4984,-4984,-4984
chr17:37025553-37025755	chr17	+	37025644	37025704	True	NM_000978,NM_006148	chr17,chr17	-,+	RPL23,LASP1	-15591,407
chr1:113223617-113223833	chr1	+	113223627	113223797	True	NM_001130079,NM_020963,NM_001042679	chr1,chr1,chr1	+,+,-	MOV10,MOV10,RHOC	-6645,-6645,25931
chr22:25422588-25423775	chr22	+	25422705	25423725	True	NM_001001663,NM_001145206	chr22,chr22	-,+	TMEM211,KIAA1671	-87391,215
chr8:59322209-59322826	chr8	+	59322421	59322699	True	NM_000780,NM_001077619	chr8,chr8	-,+	CYP7A1,UBXN2B	90071,1123
chr8:86962737-86963329	chr8	+	86962784	86963159	True	NM_152565,NM_033126	chr8,chr8	+,-	ATP6V0D2,PSKH2	147979,118753
chr9:103236326-103237403	chr9	+	103236554	103237424	True	NM_003692,NM_017746	chr9,chr9	+,-	TMEFF1,TEX10	-1085,-121295
chr1:26642667-26644101	chr1	+	26642851	26644145	True	NM_145345,NM_001077262,NM_183008,NM_001803	chr1,chr1,chr1,chr1	-,-,-,+	UBXN11,UBXN11,UBXN11,CD52	662,-9656,-9656,265
chr9:37591543-37592149	chr9	+	37591725	37592197	True	NM_014907,NM_001001790,NM_001134485,NM_001134484	chr9,chr9,chr9,chr9	+,-,-,-	FRMPD1,TOMM5,TOMM5,TOMM5	58854,489,489,489
chr14:23509269-23509945	chr14	+	23509405	23509768	True	NM_001099780,NM_001144932,NM_002797,NM_001130725	chr14,chr14,chr14,chr14	+,-,-,-	PSMB11,PSMB5,PSMB5,PSMB5	1607,-5051,-5051,-4976
chr12:52865437-52867171	chr12	+	52865522	52866802	True	NM_173086,NM_002284	chr12,chr12	-,+	KRT6C,KRT86	817,-169925
chr10:111682539-111682800	chr10	+	111682617	111682785	True	NM_020383,NM_019903,NR_030724,NM_001167604	chr10,chr10,chr10,chr10	-,+,-,-	XPNPEP1,ADD3,XPNPEP1,XPNPEP1	576,82940,576,576
chr18:67069099-67069427	chr18	+	67069156	67069298	True	NM_152721,NM_006566	chr18,chr18	+,-	DOK6,CD226	-923,554984
chr7:99717155-99717518	chr7	+	99717296	99717494	True	NM_139315,NM_152755,NM_001190415,NR_033792,NM_203397,NM_005641	chr7,chr7,chr7,chr7,chr7,chr7	-,+,-,-,+,-	TAF6,CNPY4,TAF6,TAF6,MBLAC1,TAF6	-275,-82,37,-301,6825,-301
chr10:81444867-81446642	chr10	+	81444895	81446249	True	NR_027512,NM_001098668	chr10,chr10	+,-	LOC650623,SFTPA2	-2215,-124732
chr13:28711175-28712203	chr13	+	28711177	28711947	True	NR_029383,NM_175854	chr13,chr13	-,+	LOC100288730,PAN3	1415,695
chr7:100822728-100823006	chr7	+	100822773	100823007	True	NM_198571,NM_001283	chr7,chr7	-,+	C7orf52,AP1S1	600,-25140
chr19:41816559-41817011	chr19	+	41816630	41816926	True	NM_052848,NM_000660	chr19,chr19	+,-	CCDC97,TGFB1	-587,42955
chr14:25075126-25075941	chr14	+	25075378	25075936	True	NM_033423,NM_015299	chr14,chr14	-,+	GZMH,KHNYN	2978,-176291
chr17:20056075-20057815	chr17	+	20056463	20057738	True	NM_007202,NM_001033555,NM_001033554	chr17,chr17,chr17	-,+,+	AKAP10,SPECC1,SPECC1	-175334,1663,1663
chr6:66547293-66547735	chr6	+	66547310	66547770	True	NR_026540,NM_001142801	chr6,chr6	+,-	MCART3P,EYS	-49589,-130192
chr5:141276942-141277333	chr5	+	141277014	141277214	True	NR_033244,NM_001142603	chr5,chr5	-,+	LOC729080,KIAA0141	-754,26170
chr8:133672766-133673751	chr8	+	133673046	133673501	True	NM_012472,NM_198513	chr8,chr8	-,+	LRRC6,PHF20L1	14365,114102
chr6:78528713-78530276	chr6	+	78529233	78529953	True	NM_000863,NM_001010844	chr6,chr6	-,+	HTR1B,IRAK1BP1	-356113,1047235
chr12:104532443-104532868	chr12	+	104532505	104532831	True	NM_006166,NM_013320	chr12,chr12	-,+	NFYB,HCFC2	-465,-74320
chr2:86422817-86423632	chr2	+	86422923	86423267	True	NM_006839,NM_016622,NM_001100170,NM_145644,NM_001100169	chr2,chr2,chr2,chr2,chr2	-,+,-,+,-	IMMT,MRPL35,IMMT,MRPL35,IMMT	-30,3288,-30,3288,-30
chr9:711291-711773	chr9	+	711357	711729	True	NM_152569,NM_153186	chr9,chr9	-,+	C9orf66,KANK1	-495464,-4512
chr19:36361405-36361803	chr19	+	36361792	36361852	True	NM_001024807,NM_004646,NM_005166	chr19,chr19,chr19	+,-,+	APLP1,NPHS1,APLP1	-2442,-18897,-2442
chr9:19238323-19238742	chr9	+	19238374	19238446	True	NR_038064,NM_017925	chr9,chr9	-,+	PLIN2,DENND4C	-110770,52302
chr1:68962347-68962606	chr1	+	68962376	68962636	True	NM_017779,NM_001114120,NM_001924	chr1,chr1,chr1	-,-,+	DEPDC1,DEPDC1,GADD45A	213,213,-811567
chr1:145586283-145587381	chr1	+	145586433	145587323	True	NM_006099,NM_001012758	chr1,chr1	+,-	PIAS3,NUDT17	-10501,2169
chr11:76778450-76778992	chr11	+	76778747	76779033	True	NM_182833,NM_004055	chr11,chr11	-,+	GDPD4,CAPN5	219480,-806
chr12:111355384-111356968	chr12	+	111355434	111356962	True	NM_000432,NR_036513	chr12,chr12	-,+	MYL2,LOC100131138	1492,17443
chr1:212208478-212208738	chr1	+	212208481	212208771	True	NM_001199809,NM_001199811,NM_001199812,NM_015434,NR_037667,NM_016448	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,+	INTS7,INTS7,INTS7,INTS7,INTS7,DTL	281,281,281,281,281,147
chrX:149013008-149013340	chrX	+	149013038	149013322	True	NM_001166400,NM_001166401,NM_005364,NM_001013845	chrX,chrX,chrX,chrX	+,+,+,-	MAGEA8,MAGEA8,MAGEA8,CXorf40B	-3148,-3148,-3148,93444
chr10:97435146-97436255	chr10	+	97435235	97436311	True	NM_001098175,NM_015631	chr10,chr10	+,-	ENTPD1,TCTN3	35224,17647
chr16:57701575-57701997	chr16	+	57701584	57701948	True	NM_001130099,NM_170776	chr16,chr16	-,+	KIFC3,GPR97	130031,208
chr17:73147679-73148821	chr17	+	73148089	73148851	True	NM_016185,NM_001002032,NM_001002033,NM_024585	chr17,chr17,chr17,chr17	-,-,-,+	HN1,HN1,HN1,ARMC7	1974,1973,1973,-42058
chr14:20879375-20880976	chr14	+	20879455	20880811	True	NM_007110,NM_001641	chr14,chr14	-,+	TEP1,APEX1	831,42478
chr4:99916838-99917131	chr4	+	99916897	99917127	True	NR_037455,NM_015143,NM_001968	chr4,chr4,chr4	+,+,-	MIR3684,METAP1,EIF4E	1410,-160,-65111
chr11:43960275-43961996	chr11	+	43960377	43961593	True	NM_021926,NM_001145033	chr11,chr11	-,+	ALX4,C11orf96	370173,2512
chr2:228734991-228736143	chr2	+	228735014	228735926	True	NM_025243,NM_178821	chr2,chr2	-,+	SLC19A3,WDR69	-152269,400
chr4:77040081-77041873	chr4	+	77040210	77041576	True	NM_001179,NM_017426	chr4,chr4	+,-	ART3,NUP54	-44406,28131
chr3:181427701-181428428	chr3	+	181427828	181428366	True	NR_033725,NM_003106	chr3,chr3	-,+	DNAJC19,SOX2	-720266,1345
chr16:71484544-71485513	chr16	+	71484653	71485427	True	NM_145911,NM_005769	chr16,chr16	-,+	ZNF23,CHST4	10740,74595
chr4:15386472-15387770	chr4	+	15386602	15387679	True	NM_001193534,NM_001135171	chr4,chr4	-,+	FBXL5,C1QTNF7	269411,-10478
chr7:30542233-30543609	chr7	+	30542277	30543625	True	NR_037669,NM_001199815,NM_001199817,NM_001199816,NM_024051,NM_002047	chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,+	GGCT,GGCT,GGCT,GGCT,GGCT,GARS	889,889,889,889,889,90555
chr19:49999998-50000329	chr19	+	50000024	50000310	True	NR_001285,NR_026712,NR_000020,NR_000021,NM_012423,NR_000019,NR_000018,NM_001015,NR_029703	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,+,+,+,-	SNORD35B,RPL13AP5,SNORD33,SNORD32A,RPL13A,SNORD34,SNORD35A,RPS11,MIR150	665,-9210,-6201,-6852,-9210,-5911,-5643,-441,3865
chr19:3505683-3506032	chr19	+	3505794	3506014	True	NM_031304,NM_016263,NM_001145165	chr19,chr19,chr19	-,+,-	DOHH,FZR1,DOHH	-5173,280,-4856
chr12:133192337-133193039	chr12	+	133192471	133193058	True	NM_174872,NM_174873,NM_170683,NM_170682,NM_012226,NM_016318,NM_001195520	chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,+,+,+,+,-	P2RX2,P2RX2,P2RX2,P2RX2,P2RX2,P2RX2,LOC645277	2344,2344,2344,2344,2344,2344,-5434
chr20:58515533-58515734	chr20	+	58515554	58515676	True	NM_022106,NM_014258,NM_001190827,NM_006242,NM_001190826	chr20,chr20,chr20,chr20,chr20	+,-,+,-,+	C20orf177,SYCP2,C20orf177,PPP1R3D,C20orf177	-161,-8345,-161,-202,-6786
chr5:766410-766718	chr5	+	766505	766605	True	NM_001166260,NM_007030	chr5,chr5	+,-	TRIP13,TPPP	126363,-72995
chr17:74260292-74261076	chr17	+	74260632	74261124	True	NM_052916,NM_182565	chr17,chr17	-,+	RNF157,FAM100B	-24242,161
chr22:43485493-43485989	chr22	+	43485605	43485717	True	NM_001197,NR_027779,NM_012263	chr22,chr22,chr22	+,-,-	BIK,TTLL1,TTLL1	21039,-171,-171
chr1:1477126-1477700	chr1	+	1477154	1477556	True	NM_001170536,NM_001114748	chr1,chr1	+,-	ATAD3A,C1orf70	-29295,-1414
chr5:146834770-146835593	chr5	+	146834781	146835579	True	NM_001387,NM_001112724	chr5,chr5	-,+	DPYSL3,STK32A	-1521,-220253
chr10:71177253-71177671	chr10	+	71177257	71177535	True	NM_001057,NM_012339	chr10,chr10	-,+	TACR2,TSPAN15	-583,33690
chr2:203239595-203240430	chr2	+	203239719	203240381	True	NM_003352,NM_001204	chr2,chr2	-,+	SUMO1,BMPR2	-136397,668
chr11:19137292-19138529	chr11	+	19137339	19138446	True	NM_054030,NM_019028,NM_001001483	chr11,chr11,chr11	-,+,+	MRGPRX2,ZDHHC13,ZDHHC13	-55111,245,245
chr1:76400064-76400591	chr1	+	76400098	76400365	True	NM_080868,NR_026546,NM_002440	chr1,chr1,chr1	-,-,+	ASB17,ASB17,MSH4	-1982,-1982,-137526
chr12:52304366-52305473	chr12	+	52304366	52305430	True	NM_001077401,NM_000020,NM_001013690	chr12,chr12,chr12	+,+,-	ACVRL1,ACVRL1,FIGNL2	682,-3215,-78665
chr3:42438810-42439517	chr3	+	42438973	42439505	True	NM_004624,NM_144634	chr3,chr3	+,-	VIPR1,LYZL4	104598,12610
chr16:69788857-69790589	chr16	+	69789025	69790475	True	NM_014062,NM_199423,NM_007014	chr16,chr16,chr16	-,+,+	NOB1,WWP2,WWP2	-196,5798,5798
chr7:91590564-91591012	chr7	+	91590569	91590887	True	NM_006980,NM_147185	chr7,chr7	-,+	MTERF,AKAP9	-80553,-20434
chr6:2634914-2635585	chr6	+	2635098	2635616	True	NM_152554,NM_020135	chr6,chr6	-,+	C6orf195,WRNIP1	-42,130049
chr5:124154766-124156528	chr5	+	124154774	124156330	True	NM_004384,NM_020747	chr5,chr5	+,-	CSNK1G3,ZNF608	-1307032,-73969
chr10:52751820-52752324	chr10	+	52751896	52752204	True	NM_138933,NM_001098512	chr10,chr10	-,+	A1CF,PRKG1	-106461,-1002
chr11:102742627-102743714	chr11	+	102742627	102743747	True	NM_002426,NM_001080463	chr11,chr11	-,+	MMP12,DYNC2H1	2067,236412
chrX:70330029-70331491	chrX	+	70330082	70331528	True	NM_001025265,NR_033212,NM_005120,NM_000206	chrX,chrX,chrX,chrX	-,-,+,-	CXorf65,CXorf65,MED12,IL2RG	-3444,-3444,6877,3
chr11:17033803-17034482	chr11	+	17033808	17034430	True	NM_175058,NM_005013	chr11,chr11	-,+	PLEKHA7,NUCB2	1583,263855
chr1:41697548-41699309	chr1	+	41697817	41699323	True	NM_012236,NM_001172218,NM_001172219,NR_037868,NM_001172220	chr1,chr1,chr1,chr1,chr1	-,-,-,+,-	SCMH1,SCMH1,SCMH1,LOC100507178,SCMH1	8556,8556,8556,-217610,8556
chr18:77709825-77710215	chr18	+	77709856	77710065	True	NM_001136180,NM_001146343,NM_001146345,NM_025078	chr18,chr18,chr18,chr18	+,-,-,-	HSBP1L1,PQLC1,PQLC1,PQLC1	14516,1639,1639,1639
chr3:127350730-127351364	chr3	+	127350831	127351313	True	NM_015720,NM_001142646	chr3,chr3	+,-	PODXL2,TPRA1	-2843,-41263
chr11:34535641-34536147	chr11	+	34535737	34536134	True	NM_001422,NM_001752,NM_198381	chr11,chr11,chr11	-,+,-	ELF5,CAT,ELF5	-407,-75323,-2391
chr13:113761208-113761526	chr13	+	113761337	113761515	True	NM_001127202,NM_019616,NM_000131	chr13,chr13,chr13	-,+,+	PCID2,F7,F7	101564,-1283,-1283
chr5:140787880-140788371	chr5	+	140788185	140788409	True	NM_032090,NM_032101,NM_032100,NM_018921,NM_032089,NM_018927,NM_018926,NM_005642,NM_018913	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,+,-,+	PCDHGA10,PCDHGB7,PCDHGB6,PCDHGA9,PCDHGA9,PCDHGB7,PCDHGB6,TAF7,PCDHGA10	4333,8804,-466,-5716,-5716,8850,-466,-87834,4333
chr12:132194337-132195048	chr12	+	132194347	132194953	True	NM_175066,NM_004592	chr12,chr12	-,+	DDX51,SFSWAP	433977,681
chr20:750445-750959	chr20	+	750561	750713	True	NM_033409,NM_001042353	chr20,chr20	-,+	C20orf54,FAM110A	-1333,63642
chr7:48126964-48127445	chr7	+	48126984	48127194	True	NM_181597,NM_003364,NM_152782	chr7,chr7,chr7	+,+,-	UPP1,UPP1,SUN3	1160,1551,-58268
chr20:17686779-17686986	chr20	+	17686825	17686977	True	NM_001014977,NM_004587,NM_178477	chr20,chr20,chr20	+,-,+	BANF2,RRBP1,BANF2	-6283,-23897,-6283
chr17:80293912-80294641	chr17	+	80293923	80294519	True	NM_003004,NM_207459	chr17,chr17	-,+	SECTM1,TEX19	-2002,22603
chr1:201923551-201923938	chr1	+	201923575	201923875	True	NM_006335,NM_012134	chr1,chr1	+,-	TIMM17A,LMOD1	743,-7859
chr17:8275907-8276700	chr17	+	8275908	8276395	True	NM_213597,NM_153007	chr17,chr17	-,+	KRBA2,ODF4	-1050,-32777
chr1:45252118-45252700	chr1	+	45252196	45252716	True	NR_001456,NR_001457,NM_153274	chr1,chr1,chr1	+,+,-	SNORD38A,SNORD38B,BEST4	-8733,-8185,760
chr17:3750783-3751067	chr17	+	3750806	3751037	True	NM_018553,NM_031965,NM_001114118	chr17,chr17,chr17	-,+,-	C17orf85,GSG2,C17orf85	-1266,-123660,-1266
chr20:44989690-44991564	chr20	+	44989692	44991175	True	NM_152854,NM_173073,NM_015945,NM_173179	chr20,chr20,chr20,chr20	+,-,-,-	CD40,SLC35C2,SLC35C2,SLC35C2	-242837,1939,1939,1939
chr7:102311466-102311776	chr7	+	102311465	102311773	True	NM_032959,NM_001166339	chr7,chr7	-,+	POLR2J2,SPDYE2L	459,-20746
chr7:102311466-102311776	chr7	+	44058128	44058434	False	NM_175064,NR_003655	chr7,chr7	+,-	SPDYE1,POLR2J4	-17692,364
chr7:102311466-102311776	chr7	+	102118722	102119029	False	NM_006234,NM_152892	chr7,chr7	-,+	POLR2J,LRWD1	402,-13385
chr7:102311466-102311776	chr7	+	102212385	102212693	False	NM_001166339,NM_001097615	chr7,chr7	+,-	SPDYE2L,POLR2J3	-20759,425
chr16:15528885-15529244	chr16	+	15528884	15529294	True	NM_033201,NM_001184998	chr16,chr16	+,-	C16orf45,KIAA0430	-610,207786
chrX:70315981-70316356	chrX	+	70316004	70316242	True	NM_005938,NM_001170931,NM_001025265	chrX,chrX,chrX	+,+,-	FOXO4,FOXO4,CXorf65	-56,-56,10446
chr22:19950345-19950699	chr22	+	19950372	19950736	True	NM_006440,NM_007310	chr22,chr22	-,+	TXNRD2,COMT	-21013,-353
chr7:6411848-6412509	chr7	+	6412205	6412369	True	NM_006908,NM_018890,NM_001037163	chr7,chr7,chr7	+,+,-	RAC1,RAC1,C7orf70	1756,1756,-23615
chr19:21542222-21542533	chr19	+	21542312	21542410	True	NR_027130,NM_021269	chr19,chr19	+,-	ZNF738,ZNF708	-632,-30100
chr2:203885248-203885911	chr2	+	203885463	203885604	True	NM_018256,NM_001114132	chr2,chr2	-,+	WDR12,NBEAL1	-108514,-5919
chr5:75013111-75013359	chr5	+	75013146	75013338	True	NM_152408,NM_016218,NM_001099271	chr5,chr5,chr5	-,+,-	POC5,POLK,POC5	-4866,-205540,25
chr2:233735278-233735817	chr2	+	233735290	233735816	True	NM_001114090,NM_206895	chr2,chr2	-,+	NGEF,C2orf82	57095,-347
chr7:92157245-92157525	chr7	+	92157252	92157439	True	NM_000466,NM_032120	chr7,chr7	-,+	PEX1,C7orf64	456,647
chr2:178416318-178417149	chr2	+	178416372	178417146	True	NM_003659,NM_152517	chr2,chr2	+,-	AGPS,TTC30B	-158952,428
chr1:115212413-115212646	chr1	+	115212441	115212645	True	NM_003176,NM_198459	chr1,chr1	+,-	SYCP1,DENND2C	184809,137
chr14:34956103-34957314	chr14	+	34957094	34957166	True	NR_002937,NM_138288	chr14,chr14	+,-	C14orf19,C14orf147	451961,-25626
chr14:101036320-101037106	chr14	+	101036434	101037155	True	NR_024096,NM_001159531,NM_020836	chr14,chr14,chr14	+,-,-	C14orf70,BEGAIN,BEGAIN	86449,-2027,-303
chr12:45686773-45687659	chr12	+	45686864	45687234	True	NM_001142678,NR_037144	chr12,chr12	+,-	ANO6,PLEKHA8P1	-462,-77075
chr17:4606190-4606408	chr17	+	4606293	4606445	True	NM_004313,NM_199004,NM_014389	chr17,chr17,chr17	+,+,-	ARRB2,ARRB2,PELP1	7343,7343,1237
chr19:53293315-53294030	chr19	+	53293771	53293928	True	NM_198457,NR_023311	chr19,chr19	-,+	ZNF600,ZNF137P	-3737,-193885
chr7:129285196-129285780	chr7	+	129285241	129285638	True	NM_001040110,NR_029614	chr7,chr7	+,-	NRF1,MIR182	-15373,124757
chr1:154156756-154157110	chr1	+	154156783	154157119	True	NM_001043352,NM_001043353,NM_001043351,NM_153649,NR_030600,NM_152263,NM_001127320	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,-,+	TPM3,TPM3,TPM3,TPM3,MIR190B,TPM3,UBAP2L	-1058,-1058,-1058,-1058,9150,7540,35535
chr16:4383129-4383539	chr16	+	4383143	4383369	True	NM_032575,NM_016069	chr16,chr16	+,-	GLIS2,PAM16	-969,18054
chr1:52455522-52455843	chr1	+	52455564	52455636	True	NM_002867,NM_001136497	chr1,chr1	-,+	RAB3B,BTF3L4	850,66220
chrX:2419487-2419870	chrY	+	2369560	2369754	False	NM_001171135,NM_001171136,NM_004729,NM_145177,NR_033381	chrY,chrY,chrY,chrY,chrY	-,-,-,-,+	ZBED1,ZBED1,ZBED1,DHRSX,CD99P1	-980,-552,-552,-545,107551
chrX:2419487-2419870	chrX	+	2419560	2419754	True	NM_001171135,NM_001171136,NM_004729,NM_145177,NR_033381	chrX,chrX,chrX,chrX,chrX	-,-,-,-,+	ZBED1,ZBED1,ZBED1,DHRSX,CD99P1	-980,-552,-552,-545,107551
chr7:128867365-128868999	chr7	+	128867511	128868841	True	NM_001130720,NM_015328,NR_034053	chr7,chr7,chr7	+,+,-	AHCYL2,AHCYL2,TNPO3	-2715,-2715,-172284
chr1:150572095-150573295	chr1	+	150572272	150572510	True	NM_182763,NR_036211	chr1,chr1	-,+	MCL1,MIR4257	-20058,-47918
chr5:149668676-149669307	chr5	+	149668698	149669320	True	NM_001008657,NM_171825,NM_015981	chr5,chr5,chr5	+,-,-	TCOF1,CAMK2A,CAMK2A	67881,133,133
chr18:43548380-43550176	chr18	+	43548572	43550124	True	NM_020964,NM_138443	chr18,chr18	-,+	EPG5,HAUS1	-1267,134173
chr19:45146474-45147111	chr19	+	45146802	45147108	True	NM_006505,NM_001135770,NM_001135769,NM_001135768,NR_027754	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	PVR,PVR,PVR,PVR,CEACAM22P	-11,-11,-11,-11,-86652
chr19:4537872-4538102	chr19	+	4537872	4538148	True	NM_052972,NM_032631,NM_001013706	chr19,chr19,chr19	-,+,-	LRG1,HDGFRP2,PLIN5	1938,-65668,-2664
chr6:111927680-111928311	chr6	+	111927869	111928339	True	NM_001164281,NR_028338,NM_147686,NR_034109	chr6,chr6,chr6,chr6	-,-,-,+	TRAF3IP2,TRAF3IP2,TRAF3IP2,LOC643749	-395,-395,-395,-123245
chr2:69280597-69281579	chr2	+	69280610	69281616	True	NM_032208,NM_182536	chr2,chr2	+,-	ANTXR1,GKN2	-40385,-100508
chr2:207669755-207671445	chr2	+	207670095	207671291	True	NR_036077,NR_036078	chr2,chr2	-,+	MIR3130-1,MIR3130-2	-22063,-22195
chr5:140582343-140582756	chr5	+	140582363	140582520	True	NM_018932,NM_031947,NM_018931	chr5,chr5,chr5	+,-,+	PCDHB12,SLC25A2,PCDHB11	5770,101153,-3067
chr8:80679300-80679715	chr8	+	80679318	80679602	True	NM_001040708,NM_007029,NM_012258	chr8,chr8,chr8	-,+,-	HEY1,STMN2,HEY1	546,-156329,546
chr9:21334909-21335128	chr9	+	21334942	21335136	True	NM_018847,NM_002170	chr9,chr9	-,+	KLHL9,IFNA8	343,74009
chr1:228014339-228016325	chr1	+	228014442	228016374	True	NM_183062,NM_023007	chr1,chr1	+,-	PRSS38,JMJD4	-11075,-91330
chr2:131863748-131865326	chr2	+	131863946	131865189	True	NM_001100623,NM_017958,NM_001009993	chr2,chr2,chr2	+,+,-	PLEKHB2,PLEKHB2,FAM168B	-1578,-1578,-12942
chr22:22306012-22306328	chr22	+	22306076	22306296	True	NM_148176,NM_014634	chr22,chr22	+,-	PPIL2,PPM1F	-285862,1004
chr2:233500383-233501670	chr2	+	233500571	233501652	True	NM_145702,NM_025202	chr2,chr2	-,+	TIGD1,EFHD1	-85345,-2415
chr15:41524980-41526192	chr15	+	41525213	41526033	True	NM_152596,NM_007236	chr15,chr15	-,+	EXD1,CHP	-2318,-1832
chr22:38982764-38984478	chr22	+	38982974	38984222	True	NM_001002880,NM_007068	chr22,chr22	+,-	CBY1,DMC1	68435,-16785
chr11:64124725-64125152	chr11	+	64124792	64125190	True	NM_003942,NM_001006944,NM_016404	chr11,chr11,chr11	+,+,-	RPS6KA4,RPS6KA4,TRMT112	1434,1434,-39759
chr3:49964455-49966359	chr3	+	49964642	49965990	True	NM_001167582,NM_032355,NM_001142501	chr3,chr3,chr3	+,-,-	RBM6,MON1A,MON1A	11486,1505,1505
chr22:48415531-48417110	chr22	+	48415694	48416746	True	NR_033377,NR_036172	chr22,chr22	-,+	FLJ46257,MIR3201	-388376,253429
chr2:103056419-103057622	chr2	+	103056443	103057425	True	NM_003853,NM_032718	chr2,chr2	+,-	IL18RAP,MFSD9	-21247,295962
chr17:73874101-73874301	chr17	+	73874231	73874339	True	NM_033452,NM_001080419	chr17,chr17	-,+	TRIM47,UNK	367,-93601
chr14:94575570-94577185	chr14	+	94575806	94577124	True	NM_032036,NM_001130080,NM_005532	chr14,chr14,chr14	-,+,+	IFI27L2,IFI27,IFI27	18883,-46,-46
chr19:3879069-3880918	chr19	+	3879185	3880687	True	NM_001145640,NM_033064	chr19,chr19	-,+	ZFR2,ATCAY	-10158,-70
chr7:139211268-139212342	chr7	+	139211434	139212313	True	NM_001080511,NM_198508	chr7,chr7	+,-	CLEC2L,KLRG2	-2811,-42977
chr13:37392542-37393379	chr13	+	37392547	37393165	True	NM_001127217,NM_000538	chr13,chr13	-,+	SMAD9,RFXAP	101294,173
chr19:49056723-49058642	chr19	+	49057080	49058688	True	NM_177973,NM_001080434	chr19,chr19	+,-	SULT2B1,LMTK3	-1710,-40634
chrX:48938395-48938645	chrX	+	48938402	48938472	True	NM_007213,NM_001163323,NM_001029896	chrX,chrX,chrX	-,+,-	PRAF2,CCDC120,WDR45	-6740,-21933,-838
chr4:89303001-89303457	chr4	+	89303014	89303494	True	NM_017912,NM_001165136,NM_152542	chr4,chr4,chr4	+,+,-	HERC6,HERC6,PPM1K	-3181,-3181,-97126
chr12:52695899-52696123	chr12	+	52696104	52696172	True	NM_002284,NM_002281	chr12,chr12	+,-	KRT86,KRT81	-506,-10805
chr12:52695899-52696123	chr12	-	52684777	52684845	False	NM_002284,NM_002281	chr12,chr12	+,-	KRT86,KRT81	10803,504
chr17:79672276-79672785	chr17	+	79672534	79672790	True	NM_001040025,NM_002949,NM_012140	chr17,chr17,chr17	-,+,+	ARL16,MRPL12,SLC25A10	-21580,-2185,6580
chr12:53625896-53626105	chr12	+	53625909	53626001	True	NM_000966,NM_001170790	chr12,chr12	-,+	RARG,MFSD5	85,19368
chr22:38426842-38427634	chr22	+	38426879	38427465	True	NM_001039583,NM_006941	chr22,chr22	+,-	PICK1,SOX10	25796,-46340
chr16:67261096-67262886	chr16	+	67261455	67262885	True	NM_014187,NM_012163,NM_001004055	chr16,chr16,chr16	+,-,-	TMEM208,LRRC29,LRRC29	-490,-734,-554
chr1:20618429-20618885	chr1	+	20618478	20618891	True	NM_001105572,NM_001039500	chr1,chr1	-,+	PLA2G2C,VWA5B1	-116791,-1117
chr1:115321569-115322972	chr1	+	115321831	115322893	True	NM_003176,NM_025073,NM_001102396	chr1,chr1,chr1	+,-,-	SYCP1,SIKE1,SIKE1	74561,465,465
chr8:70392081-70393872	chr8	+	70392168	70393754	True	NM_001128205,NM_001146009	chr8,chr8	+,-	SULF1,SLCO5A1	11273,351700
chr20:55041055-55041278	chr20	+	55041055	55041303	True	NM_080615,NM_016407	chr20,chr20	-,+	GCNT7,C20orf43	59728,2343
chrX:100603370-100603716	chrX	+	100603442	100603732	True	NM_001145951,NM_021029,NM_004085	chrX,chrX,chrX	-,+,-	TIMM8A,RPL36A,TIMM8A	26,42145,275
chr4:81189749-81190170	chr4	+	81189766	81190190	True	NM_001145794,NM_004464,NM_033143	chr4,chr4,chr4	-,+,+	ANTXR2,FGF5,FGF5	-195289,-2075,-2075
chr15:67811808-67813106	chr15	+	67812250	67813029	True	NM_001143936,NM_024666	chr15,chr15	+,-	C15orf61,AAGAB	492,-265176
chr22:18632929-18633452	chr22	+	18633015	18633425	True	NM_001136004,NM_017414	chr22,chr22	-,+	MICAL3,USP18	-125690,-320
chr11:5269265-5271137	chr11	+	5269270	5271102	True	NM_000559,NR_001589,NM_000184,NM_001004750	chr11,chr11,chr11,chr11	-,-,-,+	HBG1,HBBP1,HBG2,OR51B6	35,-4448,4959,101635
chr11:5269265-5271137	chr11	+	5274578	5276026	False	NM_000559,NR_001589,NM_000184,NM_001004750	chr11,chr11,chr11,chr11	-,-,-,+	HBG1,HBBP1,HBG2,OR51B6	-3491,-9756,35,96711
chr17:80024378-80025801	chr17	+	80024439	80025642	True	NM_212492,NM_022156	chr17,chr17	+,-	GPS1,DUS1L	-14727,-759
chr3:195937656-195937945	chr3	+	195937684	195937922	True	NM_001039617,NM_152672	chr3,chr3	-,+	ZDHHC19,OSTalpha	428,5460
chr2:33046611-33048483	chr2	+	33046731	33048487	True	NM_021209,NR_027098	chr2,chr2	-,+	NLRC4,LOC285045	-555919,2022
chr19:35518678-35519049	chr19	+	35518771	35518999	True	NM_001037,NM_199037,NM_175872	chr19,chr19,chr19	+,+,-	SCN1B,SCN1B,ZNF792	2592,2592,-63818
chr1:144930704-144931498	chr1	+	144930821	144931545	True	NM_004892,NM_001002811	chr1,chr1	+,-	SEC22B,PDE4DIP	164861,539
chr14:101194309-101194746	chr14	+	101194311	101194551	True	NM_003836,NM_001134888	chr14,chr14	+,-	DLK1,RTL1	-1160,156683
chr6:14945689-14946884	chr6	+	14945983	14946665	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	299861,716674
chr19:52677398-52677880	chr19	+	52677683	52677754	True	NM_001102657,NM_014225	chr19,chr19	-,+	ZNF836,PPP2R1A	-2787,15300
chr12:110905593-110905881	chr12	+	110905683	110905917	True	NM_013300,NM_001164372,NM_016301,NM_001164373	chr12,chr12,chr12,chr12	+,-,-,-	C12orf24,GPN3,GPN3,GPN3	314,659,222,222
chr8:29926949-29927645	chr8	+	29926953	29927505	True	NM_016127,NM_015344	chr8,chr8	-,+	TMEM66,LEPROTL1	13195,25416
chr4:78982678-78984120	chr4	+	78982894	78984136	True	NM_025074,NM_144571,NM_001166133	chr4,chr4,chr4	+,-,+	FRAS1,CNOT6L,FRAS1	-4221,-242350,-4221
chr16:23193614-23193875	chr16	+	23193638	23193828	True	NM_001039,NM_020718	chr16,chr16	+,-	SCNN1G,USP31	211,-33047
chr2:27543362-27544203	chr2	+	27543529	27544183	True	NM_187841,NM_002437	chr2,chr2	+,-	TRIM54,MPV17	-38284,1836
chr6:165721407-165722168	chr6	+	165721408	165722192	True	NM_144980,NR_027284	chr6,chr6	-,+	C6orf118,LOC441177	969,678846
chr12:52864945-52865437	chr12	+	52865094	52865380	True	NM_173086,NM_002284	chr12,chr12	-,+	KRT6C,KRT86	2239,-169506
chr12:52864945-52865437	chr12	+	52843667	52843717	False	NM_002284,NM_005555	chr12,chr12	+,-	KRT86,KRT6B	-148069,2243
chrX:134048503-134048705	chrX	+	134048504	134048744	True	NM_019556,NM_001163438	chrX,chrX	-,+	MOSPD1,LOC644538	603,76223
chr2:230927724-230929446	chr2	+	230928030	230929310	True	NM_174899,NM_152527	chr2,chr2	+,-	FBXO36,SLC16A14	-140874,4455
chr5:111496045-111496439	chr5	+	111496051	111496487	True	NR_002922,NM_001142475,NR_015370	chr5,chr5,chr5	+,-,+	SNORA13,C5orf13,NCRNA00219	694,-183423,6
chr16:85647836-85648044	chr16	+	85647853	85647995	True	NM_001134473,NM_014615,NM_016095	chr16,chr16,chr16	+,+,-	KIAA0182,KIAA0182,GINS2	-2875,-980,74643
chr2:79738700-79739722	chr2	+	79738801	79739260	True	NM_001164883,NM_004389,NR_036231	chr2,chr2,chr2	+,+,-	CTNNA2,CTNNA2,MIR4264	799,799,137276
chr16:85587669-85587995	chr16	+	85587694	85588000	True	NM_001134473,NM_016095	chr16,chr16	+,-	KIAA0182,GINS2	57028,134638
chr1:100730298-100731653	chr1	+	100730667	100731565	True	NM_001918,NM_003729,NM_001130841	chr1,chr1,chr1	-,+,+	DBT,RTCD1,RTCD1	-15258,148,148
chr12:32907739-32908047	chr12	+	32907855	32908085	True	NM_001040436,NM_012063	chr12,chr12	-,+	YARS2,DNM1L	852,-75774
chr1:161559430-161560901	chr1	+	161559704	161560542	True	NM_201563,NM_001127596	chr1,chr1	+,-	FCGR2C,FCGR3A	-8626,-39291
chr1:161559430-161560901	chr1	+	161642029	161642080	False	NM_004001,NM_001002273,NM_001190828,NM_001002274,NM_001002275,NR_002595	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-	FCGR2B,FCGR2B,FCGR2B,FCGR2B,FCGR2B,RPL31P11	-9176,-9176,-9176,-9176,-9176,13013
chrX:150732238-150732672	chrX	+	150732288	150732692	True	NR_029973,NM_173493	chrX,chrX	-,+	MIR452,PASD1	395542,-332
chr20:3385535-3387180	chr20	+	3385544	3387114	True	NM_001009984,NM_139322	chr20,chr20	-,+	C20orf194,ATRN	1191,64550
chr10:51621501-51623149	chr10	+	51621596	51623080	True	NM_001145262,NM_006327	chr10,chr10	+,-	NCOA4,TIMM23	-45372,306
chr10:51621501-51623149	chr10	-	51371937	51373155	False	NM_003631,NR_029388,NM_002443	chr10,chr10,chr10	-,-,+	PARG,LOC728407,MSMB	-606,-621,176397
chr19:7005545-7006117	chr19	+	7005593	7006131	True	NR_024372,NM_001136507	chr19,chr19	-,+	FLJ25758,MBD3L5	345,24462
chr7:1497825-1498302	chr7	+	1497872	1498180	True	NM_002360,NM_182924	chr7,chr7	+,-	MAFK,MICALL2	72187,979
chr1:15737575-15737938	chr1	+	15737789	15737983	True	NM_024329,NM_001229	chr1,chr1	+,-	EFHD2,CASP9	-1449,113007
chr10:26505011-26505227	chr10	+	26505015	26505275	True	NM_001134366,NM_001012750,NM_000818	chr10,chr10,chr10	+,-,+	GAD2,ABI1,GAD2	-40,644791,-40
chr2:208633666-208633909	chr2	+	208633733	208633947	True	NM_152523,NM_003468	chr2,chr2	+,-	CCNYL1,FZD5	-57520,246
chr8:146278069-146278390	chr8	+	146278094	146278350	True	NR_023392	chr8	-	ZNF252	-49809
chr19:16304863-16305380	chr19	+	16305009	16305086	True	NM_014077,NM_001130524,NM_032493,NM_054113	chr19,chr19,chr19,chr19	+,+,+,-	FAM32A,AP1M1,AP1M1,CIB3	-8832,3578,3578,-20723
chr1:161056459-161057425	chr1	+	161056629	161057394	True	NR_033385,NM_030916	chr1,chr1	+,-	KLHDC9,PVRL4	10756,2042
chrX:110865436-110865892	chrX	+	110865582	110865769	True	NM_178153,NM_001039210	chrX,chrX	-,+	DCX,ALG13	-210122,58576
chr7:150757622-150758409	chr7	+	150757625	150758037	True	NM_001164410,NM_001199693,NM_001199692,NM_003040,NM_004935,NM_001199694	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,-,+	CDK5,SLC4A2,SLC4A2,SLC4A2,CDK5,SLC4A2	-2573,1596,-2377,-1019,-2573,1701
chr9:130329796-130330333	chr9	+	130329913	130330299	True	NM_022833,NM_001032221	chr9,chr9	-,+	FAM129B,STXBP1	1106,44186
chr12:7079770-7080009	chr12	+	7079780	7080056	True	NR_029779,NM_007273,NR_029682,NM_001144831,NR_003010,NM_006331	chr12,chr12,chr12,chr12,chr12,chr12	+,-,+,-,-,+	MIR200C,PHB2,MIR141,PHB2,SCARNA12,EMG1	-6969,17,-6571,42,-3011,19
chr2:71453644-71453998	chr2	+	71453661	71453757	True	NM_005791,NM_020459	chr2,chr2	+,-	MPHOSPH10,PAIP2B	-96268,526
chr5:66119278-66119616	chr5	+	66119601	66119666	True	NM_005582,NM_015183	chr5,chr5	-,+	CD180,MAST4	373006,4937
chr7:44161574-44162051	chr7	+	44161818	44162100	True	NM_001129,NM_006230,NM_001127218	chr7,chr7,chr7	+,-,-	AEBP1,POLD2,POLD2	-17910,1099,1099
chr5:35048041-35048358	chr5	+	35048293	35048383	True	NM_194283,NM_031900	chr5,chr5	+,-	DNAJC21,AGXT2	-118654,-53
chr19:2698416-2699671	chr19	+	2698606	2699656	True	NM_003249,NM_052847	chr19,chr19	+,-	THOP1,GNG7	85849,3140
chr3:161066124-161067552	chr3	+	161066348	161067573	True	NM_015938,NM_001040100	chr3,chr3	+,-	NMD3,C3orf57	-127307,22348
chr19:4401535-4402546	chr19	+	4401682	4402406	True	NM_001199943,NM_003025,NM_001199944,NM_005483	chr19,chr19,chr19,chr19	-,-,-,+	SH3GL1,SH3GL1,SH3GL1,CHAF1A	-1117,-1117,-1267,253
chr14:78864479-78866205	chr14	+	78864791	78866117	True	NM_004796,NM_012245	chr14,chr14	+,-	NRXN3,SNW1	3975,-637294
chr2:201372970-201374393	chr2	+	201373318	201374407	True	NM_152387,NM_001160046	chr2,chr2	-,+	KCTD18,SGOL2	435,16457
chr7:148582793-148583261	chr7	+	148582906	148583087	True	NM_152998,NM_003592,NM_004456,NM_001203247,NM_001203248,NM_001203249	chr7,chr7,chr7,chr7,chr7,chr7	-,+,-,-,-,-	EZH2,CUL1,EZH2,EZH2,EZH2,EZH2	-1465,-187024,-1465,-1465,-1465,-2305
chr13:27746290-27746505	chr13	+	27746423	27746537	True	NM_000982,NM_182488	chr13,chr13	+,-	RPL21,USP12	79154,-390
chr17:40728301-40728795	chr17	+	40728353	40728769	True	NM_016556,NM_170607,NM_198204,NM_198205,NM_013290	chr17,chr17,chr17,chr17,chr17	-,+,+,+,-	PSMC3IP,MLX,MLX,MLX,PSMC3IP	1031,-9339,-9339,-9339,1031
chr2:152678280-152678819	chr2	+	152678638	152678872	True	NM_012097,NM_001037174,NM_177985,NM_001177665	chr2,chr2,chr2,chr2	-,-,-,+	ARL5A,ARL5A,ARL5A,RIF1	6191,6191,6191,-412085
chr5:180415067-180415414	chr5	+	180415095	180415313	True	NM_197975,NM_152283	chr5,chr5	+,-	BTNL3,ZFP62	531,-126809
chr3:180318453-180319531	chr3	+	180318749	180319424	True	NM_001042601,NM_133462,NM_181426	chr3,chr3,chr3	+,+,-	TTC14,TTC14,CCDC39	493,493,77916
chr6:135827807-135829742	chr6	+	135827938	135829642	True	NM_001134832,NM_001134830,NM_001134831,NM_017651,NR_026805	chr6,chr6,chr6,chr6,chr6	-,-,-,-,+	AHI1,AHI1,AHI1,AHI1,NCRNA00271	-9035,-9035,-9035,-9035,-9056
chrX:153359865-153360942	chrX	+	153359912	153360942	True	NM_020061,NM_001110792,NM_004992	chrX,chrX,chrX	+,-,-	OPN1LW,MECP2,MECP2	48782,2296,2296
chr14:50320627-50321888	chr14	+	50320647	50321857	True	NM_004713,NM_001663	chr14,chr14	-,+	NEMF,ARF6	-1108,37878
chr12:109125759-109127038	chr12	+	109126167	109126929	True	NM_001917,NM_014325	chr12,chr12	+,-	DAO,CORO1C	146927,-872
chr9:32985423-32986591	chr9	+	32985613	32986222	True	NM_001539,NM_001195249	chr9,chr9	+,-	DNAJA1,APTX	38986,15412
chr2:86096039-86097840	chr2	+	86096085	86097677	True	NM_032827,NM_001042437	chr2,chr2	+,-	ATOH8,ST3GAL5	-115227,-1292
chr7:27184759-27184979	chr7	+	27184782	27185022	True	NR_002795,NM_019102,NM_024014	chr7,chr7,chr7	+,-,-	HOXA11-AS1,HOXA5,HOXA6	40004,-1495,2396
chr8:136267984-136268584	chr8	+	136268023	136268201	True	NR_026706,NR_029599	chr8,chr8	+,-	LOC286094,MIR30D	-21707,-450835
chr12:80312817-80313056	chr12	+	80312895	80313056	True	NM_001143886,NM_173591	chr12,chr12	-,+	PPP1R12A,OTOGL	-5204,290176
chr6:41704242-41705659	chr6	+	41704299	41705599	True	NM_001167827,NM_007162,NM_013397,NM_001166424,NM_002630	chr6,chr6,chr6,chr6,chr6	-,-,+,-,-	TFEB,TFEB,PRICKLE4,PGC,PGC	-302,-1501,42900,9590,9590
chr6:39893503-39895116	chr6	+	39893689	39894900	True	NM_001075098,NR_033233,NM_005943,NM_015345	chr6,chr6,chr6,chr6	-,-,-,+	MOCS1,MOCS1,MOCS1,DAAM2	7447,7447,612,-132967
chr5:96084268-96084649	chr5	+	96084268	96084691	True	NR_033798,NM_016442	chr5,chr5	+,-	CAST,ERAP1	-5081,59252
chr10:64895697-64895983	chr10	+	64895698	64895849	True	NM_004241,NM_030759	chr10,chr10	-,+	JMJD1C,NRBF2	133184,-2749
chr2:114462850-114463832	chr2	+	114463233	114463696	True	NM_013412,NM_025181	chr2,chr2	+,-	RABL2A,SLC35F5	-78474,50756
chr1:11863067-11863268	chr1	+	11863073	11863295	True	NM_001286,NM_021735,NM_021736,NM_021737,NM_005957	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	CLCN6,CLCN6,CLCN6,CLCN6,MTHFR	2911,2911,2911,2911,2915
chr17:37887000-37887269	chr17	+	37887003	37887169	True	NM_032339,NM_001030002,NM_005310	chr17,chr17,chr17	-,+,+	C17orf37,GRB7,GRB7	-215,7420,7017
chr11:113847746-113848439	chr11	+	113847788	113848376	True	NM_000869,NM_213621,NM_001161772,NM_020886	chr11,chr11,chr11,chr11	+,+,+,-	HTR3A,HTR3A,HTR3A,USP28	-2042,-2042,-77,-101532
chr17:62341451-62342289	chr17	+	62341495	62342277	True	NM_018469,NR_002995	chr17,chr17	-,+	TEX2,SNORA76	-842,-117848
chr12:56617023-56618068	chr12	+	56617421	56618000	True	NM_173596,NM_194359,NM_005785,NM_194358,NM_001135195,NM_024068	chr12,chr12,chr12,chr12,chr12,chr12	+,-,-,-,+,+	SLC39A5,RNF41,RNF41,RNF41,SLC39A5,OBFC2B	5819,-1686,-1717,-1717,6500,124
chr8:21967628-21969131	chr8	+	21967639	21969134	True	NM_024815,NM_022749	chr8,chr8	-,+	NUDT18,FAM160B2	-707,-20976
chr9:104499512-104499920	chr9	+	104499560	104499876	True	NM_019592,NM_133445	chr9,chr9	+,-	RNF20,GRIN3A	-203478,1036
chr20:42938178-42938907	chr20	+	42938194	42938915	True	NM_178491,NM_001080472	chr20,chr20	+,-	R3HDML,FITM2	26710,1027
chr10:102001065-102002150	chr10	+	102001124	102002071	True	NM_005063,NR_002954	chr10,chr10	+,-	SCD,SNORA12	104700,-4065
chrX:118531331-118531853	chrX	+	118531693	118531811	True	NM_145305,NR_028443	chrX,chrX	+,-	SLC25A43,LOC100303728	1446,71323
chr6:157742333-157744215	chr6	+	157742526	157744087	True	NM_018452,NM_024630	chr6,chr6	-,+	C6orf35,ZDHHC14	1216,58469
chr11:118215119-118216596	chr11	+	118215247	118216502	True	NM_000073,NM_001040651,NM_000732	chr11,chr11,chr11	+,-,-	CD3G,CD3D,CD3D	-239,-1788,-1788
chr6:116848948-116850231	chr6	+	116849245	116850196	True	NM_001139444,NM_153036	chr6,chr6	-,+	BET3L,FAM26D	16627,-2
chr8:6856780-6858313	chr8	+	6857022	6857618	True	NM_001042500,NM_004084,NM_001164452,NR_036687,NR_036686	chr8,chr8,chr8,chr8,chr8	-,-,+,-,-	DEFA1B,DEFA1,FAM90A14,DEFT1P2,DEFT1P	-298,-298,256807,8778,8778
chr8:6856780-6858313	chr8	+	6838458	6838508	False	NM_001042500,NM_018361,NM_004084,NR_036687,NR_036686	chr8,chr8,chr8,chr8,chr8	-,+,-,-,-	DEFA1B,AGPAT5,DEFA1,DEFT1P2,DEFT1P	-844,-272631,-844,8785,8785
chr8:11988348-11988692	chr8	+	11988370	11988728	True	NM_201402,NR_003275,NR_027425	chr8,chr8,chr8	-,-,+	USP17L2,LOC392196,FAM66D	7591,-1566,-15130
chr16:70322949-70323152	chr16	+	70322948	70323144	True	NM_001014451,NM_001014449,NM_007242,NM_001605	chr16,chr16,chr16,chr16	+,+,+,-	DDX19B,DDX19B,DDX19B,AARS	9927,9927,9927,318
chr20:62436364-62436668	chr20	+	62436559	62436695	True	NM_080622,NM_025224	chr20,chr20	+,-	ABHD16B,ZBTB46	55870,211
chr1:23948515-23949468	chr1	+	23948606	23949346	True	NM_002167,NR_027042	chr1,chr1	-,+	ID3,MDS2	-62284,4477
chr6:99838300-99838611	chr6	+	99838484	99838577	True	NM_017421,NM_001195131	chr6,chr6	-,+	COQ3,LOC100130890	3562,130292
chr22:50521547-50522181	chr22	+	50521591	50522055	True	NM_139202,NM_018995,NM_015166,NM_001164105,NM_001164104	chr22,chr22,chr22,chr22,chr22	-,+,-,+,+	MLC1,MOV10L1,MLC1,MOV10L1,MOV10L1	1776,6379,2353,6629,6379
chr2:151343767-151344214	chr2	+	151343838	151344231	True	NM_007115,NM_005168	chr2,chr2	+,-	TNFAIP6,RND3	869874,-1
chr11:77850822-77851070	chr11	+	77850860	77851104	True	NM_024079,NM_001007027,NM_020798	chr11,chr11,chr11	-,-,+	ALG8,ALG8,USP35	-161,-161,48753
chr8:25043935-25044570	chr8	+	25044192	25044563	True	NM_024940,NM_006158	chr8,chr8	+,-	DOCK5,NEFL	-1966,-230061
chr1:14024623-14025229	chr1	+	14024630	14025135	True	NM_015866,NM_001135610,NM_012231,NM_001010847	chr1,chr1,chr1,chr1	+,+,+,-	PRDM2,PRDM2,PRDM2,LRRC38	6214,1599,6214,-184388
chr6:7387233-7388190	chr6	+	7387263	7387956	True	NM_205864,NM_031480,NM_001170692,NM_001170693	chr6,chr6,chr6,chr6	-,+,-,-	CAGE1,RIOK1,CAGE1,CAGE1	2036,2105,2036,2036
chr5:140012383-140012685	chr5	+	140012415	140012685	True	NM_001040021,NM_000591,NM_018502,NM_001174104,NM_001174105	chr5,chr5,chr5,chr5,chr5	-,-,+,-,-	CD14,CD14,TMCO6,CD14,CD14	651,400,6326,651,651
chr11:64000353-64000869	chr11	+	64000430	64000649	True	NM_031472,NM_057092,NM_001160389,NM_001033678,NM_032344,NM_005528,NM_004470,NM_003377,NM_001160392,NM_001160393,NM_001160390,NM_001128613,NM_001128612,NM_001135208	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,+,-,-,+,+,+,+,-,-,-,+,+,+	TRPT1,FKBP2,TRPT1,TRPT1,NUDT22,DNAJC4,FKBP2,VEGFB,TRPT1,TRPT1,TRPT1,NUDT22,NUDT22,FKBP2	-6704,8938,-6704,-6704,-6743,-2728,7763,1616,-6704,-7089,-6704,-6743,-6743,7954
chr9:118922501-118923314	chr9	+	118922632	118923185	True	NM_002581,NR_024032	chr9,chr9	+,-	PAPPA,C9orf27	-6613,-235255
chr3:88189080-88190743	chr3	+	88189113	88190782	True	NM_173824,NM_001195308,NM_018293	chr3,chr3,chr3	+,-,+	C3orf38,CGGBP1,ZNF654	8110,8293,-909
chr5:52392959-52394046	chr5	+	52392998	52394053	True	NM_004531,NR_034107	chr5,chr5	-,+	MOCS2,LOC257396	11322,11633
chrY:3446454-3447306	chrY	+	3446814	3447303	True	NM_003140,NM_139214	chrY,chrY	-,+	SRY,TGIF2LY	-791022,-7
chrY:3446454-3447306	chrX	+	89176613	89177049	False	NM_138960,NM_004538	chrX,chrX	+,-	TGIF2LX,NAP1L3	8,3751683
chr3:128293522-128294155	chr3	+	128293606	128293673	True	NM_007354,NR_026954	chr3,chr3	-,+	C3orf27,LOC90246	1307,-66981
chr4:81120475-81120742	chr4	+	81120540	81120780	True	NM_001099403,NM_001145794	chr4,chr4	+,-	PRDM8,ANTXR2	-1941,-126063
chr17:12631887-12632209	chr17	+	12632136	12632207	True	NM_001146313,NM_001165962	chr17,chr17	+,-	MYOCD,ELAC2	-8586,289231
chr19:36124002-36124555	chr19	+	36124148	36124556	True	NM_000704,NM_024321,NM_014209	chr19,chr19,chr19	-,+,+	ATP4A,RBM42,ETV2	-69588,-4219,8090
chr11:62448701-62449135	chr11	+	62448701	62449194	True	NM_203422,NM_015853,NM_001085372,NM_024099	chr11,chr11,chr11,chr11	-,-,+,-	LRRN4CL,UBXN1,C11orf83,C11orf48	8238,-2174,-9631,-9460
chr3:80818021-80819508	chr3	+	80818206	80819526	True	NM_001128929,NM_000158	chr3,chr3	+,-	ROBO2,GBE1	-3671108,991474
chr5:175787250-175787523	chr5	+	175787470	175787530	True	NM_173664,NM_001079685,NM_001079684,NM_020444	chr5,chr5,chr5,chr5	+,-,-,-	ARL10,KIAA1191,KIAA1191,KIAA1191	4971,1329,1329,1329
chr17:4850079-4850565	chr17	+	4850134	4850561	True	NM_001165418,NM_053013,NM_005022,NM_001165417,NM_003562,NM_001976,NM_001193503,NM_015528	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,-,-,-,+,+,+	SLC25A11,ENO3,PFN1,SLC25A11,SLC25A11,ENO3,ENO3,RNF167	-6672,3822,1315,-6672,-6672,3822,3822,-6555
chr19:58060735-58062689	chr19	+	58060842	58062546	True	NM_001039654,NM_153263	chr19,chr19	-,+	ZNF550,ZNF549	5229,-22201
chr6:144416322-144417004	chr6	+	144416457	144417035	True	NM_031287,NM_003764	chr6,chr6	-,+	SF3B5,STX11	3,54618
chr15:42493774-42495279	chr15	+	42493924	42495075	True	NM_198141,NM_015289,NR_030357	chr15,chr15,chr15	+,-,-	GANC,VPS39,MIR627	71290,5478,-2060
chr2:242128264-242128607	chr2	+	242128335	242128655	True	NM_015148,NM_001001666,NM_001001891	chr2,chr2,chr2	-,+,+	PASK,ANO7,ANO7	-39457,-462,-462
chr4:75721005-75722782	chr4	+	75721037	75722323	True	NM_001729,NM_015393	chr4,chr4	-,+	BTC,PARM1	-1155,135961
chr16:85040883-85041484	chr16	+	85041054	85041425	True	NM_017740,NM_001145548,NM_014732	chr16,chr16,chr16	-,-,+	ZDHHC7,ZDHHC7,KIAA0513	3767,3767,19984
chr7:150068572-150068843	chr7	+	150068744	150068824	True	NM_002889,NM_173680,NM_013400,NM_014374,NM_001099695,NM_001099696	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,+,+	RARRES2,ZNF775,REPIN1,REPIN1,REPIN1,REPIN1	-29981,7581,-2916,-537,-2916,-2916
chr3:149530292-149530561	chr3	+	149530358	149530544	True	NM_007282,NM_001144960,NM_183381	chr3,chr3,chr3	+,-,+	RNF13,C3orf16,RNF13	44,-19748,44
chrX:79829536-79830157	chrX	+	79829579	79830139	True	NM_152630,NM_153252	chrX,chrX	+,-	FAM46D,BRWD3	-153684,235144
chr16:3185341-3186125	chr16	+	3185396	3185626	True	NM_004220,NR_024167,NM_001134655	chr16,chr16,chr16	+,-,+	ZNF213,MGC3771,ZNF213	-390,-19797,-313
chr2:169928614-169929774	chr2	+	169928818	169929815	True	NM_199204,NM_003742,NM_001142271,NM_001142270,NM_005771	chr2,chr2,chr2,chr2,chr2	+,-,+,+,+	DHRS9,ABCB11,DHRS9,DHRS9,DHRS9	-5326,-40985,7801,-117,-7572
chrX:85603043-85604297	chrX	+	85603043	85604306	True	NM_001145414,NM_001139515	chrX,chrX	-,+	CHM,DACH2	-300477,-85126
chr21:45706077-45706579	chr21	+	45706276	45706594	True	NM_175867,NM_000658,NM_000383	chr21,chr21,chr21	-,+,+	DNMT3L,AIRE,AIRE	-24177,3679,-564
chr2:69875810-69877113	chr2	+	69876323	69876731	True	NM_014911,NM_001153	chr2,chr2	-,+	AAK1,ANXA4	-5346,92395
chr10:43631758-43632734	chr10	+	43631770	43632603	True	NM_018590,NM_145313	chr10,chr10	+,-	CSGALNACT2,RASGEF1A	1330,129815
chrX:137843546-137843798	chrX	+	137843553	137843793	True	NM_033642,NR_028597	chrX,chrX	-,+	FGF13,SRD5A1P1	-22038,685184
chr4:8176477-8176864	chr4	+	8176536	8176888	True	NM_001130088,NM_018986	chr4,chr4	-,+	ABLIM2,SH3TC1	-15977,24171
chr4:8176477-8176864	chr3	+	155654271	155655405	False	NM_003875,NM_004733	chr3,chr3	+,-	GMPS,SLC33A1	-67077,-82023
chr19:53498739-53499641	chr19	+	53498837	53499492	True	NM_152473,NR_003578	chr19,chr19	+,-	HERV-V1,ZNF702P	17851,-2053
chr2:37368199-37369569	chr2	+	37368199	37369024	True	NM_001135652,NR_037879	chr2,chr2	-,+	EIF2AK2,LOC100505876	5997,54610
chr20:61552541-61552762	chr20	+	61552540	61552810	True	NM_001193370,NM_017896,NM_001193369,NM_080796	chr20,chr20,chr20,chr20	-,+,-,-	DIDO1,C20orf11,DIDO1,DIDO1	5143,16630,5143,5143
chr17:6554295-6554914	chr17	+	6554457	6554867	True	NM_016060,NM_001105520	chr17,chr17	-,+	MED31,C17orf100	137,191
chr11:73019940-73020163	chr11	+	73019946	73020196	True	NM_014824,NM_014786	chr11,chr11	-,+	FCHSD2,ARHGEF17	-166803,-334
chr1:48417380-48419225	chr1	+	48417543	48419199	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	43413,269157
chr8:56798965-56800259	chr8	+	56799096	56799900	True	NM_002350,NM_152417,NM_001111097	chr8,chr8,chr8	+,-,+	LYN,TMEM68,LYN	-6763,-113211,-6763
chr9:137964370-137965349	chr9	+	137964441	137965276	True	NM_014279,NM_006334,NM_002003	chr9,chr9,chr9	+,+,-	OLFM1,OLFM1,FCN1	1812,1826,-154635
chr22:22984653-22984955	chr22	+	22984869	22984955	True	NM_199127,NR_024591	chr22,chr22	+,-	GGTLC2,POM121L1P	3826,2107
chr22:22984653-22984955	chr22	-	21044990	21045042	False	NM_002650,NR_024592	chr22,chr22	-,+	PI4KA,POM121L4P	43963,-1198
chr11:57422660-57423146	chr11	+	57422998	57423159	True	NM_145008,NM_006831,NM_001142597	chr11,chr11,chr11	-,+,+	YPEL4,CLP1,CLP1	-5581,2056,2056
chr12:6423025-6423388	chr12	+	6423101	6423375	True	NM_001144857,NM_001144856,NM_001065,NM_018173	chr12,chr12,chr12,chr12	+,+,-,+	PLEKHG6,PLEKHG6,TNFRSF1A,PLEKHG6	-1335,-3053,27958,-3550
chr22:35650634-35652583	chr22	+	35650898	35652237	True	NM_001003681,NR_027780,NM_005368	chr22,chr22,chr22	+,+,-	HMGXB4,HMGXB4,MB	1207,1207,361197
chr10:105676842-105677331	chr10	+	105676884	105677302	True	NM_024928,NM_014720	chr10,chr10	-,+	OBFC1,SLK	793,50167
chr22:50925199-50925570	chr22	+	50925198	50925426	True	NM_024866,NM_017584,NM_002972	chr22,chr22,chr22	+,+,-	ADM2,MIOX,SBF1	-5237,-36,-11734
chr13:45154020-45154734	chr13	+	45154333	45154613	True	NM_001010897,NM_183422	chr13,chr13	+,-	SERP2,TSC22D1	-206406,-3632
chr1:2037050-2037261	chr1	+	2037239	2037309	True	NR_024445,NM_001033582	chr1,chr1	-,+	LOC100128003,PRKCZ	87765,-1135
chr1:29734-30318	chr2	-	114340724	114340774	True	NR_026821,NR_024077,NR_024005	chr2,chr2,chr2	+,+,-	FAM138B,WASH2P,DDX11L2	-5816,455,18429
chr1:29734-30318	chr1	+	29781	30344	False	NM_001005221,NR_028325	chr1,chr1	-,+	OR4F29,LOC100132062	591740,293547
chr1:29734-30318	chr9	+	29559	30122	False	NM_182905,NM_203447,NR_026822	chr9,chr9,chr9	-,+,-	WASH1,DOCK8,FAM138C	10,184742,5792
chr1:29734-30318	chr12	-	73343	73904	False	NR_028269,NR_026823	chr12,chr12	+,-	LOC100288778,FAM138D	14079,75558
chr1:29734-30318	chr15	-	102500820	102501383	False	NR_026819,NR_034090	chr15,chr15	+,-	FAM138E,DDX11L9	-5783,17963
chr10:27795544-27796826	chr10	+	27795693	27796463	True	NM_021252,NM_001034842	chr10,chr10	+,-	RAB18,PTCHD3	-2497,-92396
chr6:84225625-84226149	chr6	+	84225849	84225925	True	NM_002395,NM_001170423,NM_153362	chr6,chr6,chr6	-,+,+	ME1,PRSS35,PRSS35	-84911,-3713,-3713
chr9:139873802-139874134	chr9	+	139873893	139874181	True	NM_000954,NM_004669,NM_207510	chr9,chr9,chr9	+,-,+	PTGDS,CLIC3,LCNL1	-1988,16893,3263
chr10:63448901-63449281	chr10	+	63448900	63449299	True	NM_178505,NM_173554	chr10,chr10	-,+	TMEM26,C10orf107	-235692,-26238
chr7:99149114-99149446	chr7	+	99149125	99149485	True	NM_001009958,NM_145111,NM_001009960,NM_138494,NM_001085368,NM_001085367,NM_024061,NM_001083956,NM_001085366	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,-,+,+,+,+,+,+,+	ZNF655,FAM200A,ZNF655,ZNF655,ZNF655,ZNF655,ZNF655,ZNF655,ZNF655	6962,322,6962,6559,6962,6962,6559,6559,6559
chr19:38893758-38893990	chr19	+	38893771	38893909	True	NM_152657,NM_174905	chr19,chr19	-,+	GGN,FAM98C	-15103,-47
chr11:108337020-108337840	chr11	+	108337345	108337885	True	NM_004398,NM_152587	chr11,chr11	+,-	DDX10,C11orf65	197930,423
chr20:50182857-50183842	chr20	+	50182960	50183756	True	NM_014484,NM_001136021	chr20,chr20	+,-	MOCS3,NFATC2	-607648,-3792
chr1:233425222-233426673	chr1	+	233425249	233426610	True	NM_032435,NM_014801	chr1,chr1	+,-	KIAA1804,PCNXL2	36903,4899
chr1:76540319-76540538	chr1	+	76540422	76540586	True	NM_001160011,NM_152996,NR_026546	chr1,chr1,chr1	+,+,-	ST6GALNAC3,ST6GALNAC3,ASB17	-84,-84,-142306
chr8:143543836-143544038	chr8	+	143544005	143544071	True	NM_145003,NM_001702	chr8,chr8	-,+	TSNARE1,BAI1	-59462,1305
chrX:152689062-152689690	chrX	+	152689073	152689570	True	NM_001136273,NM_080701	chrX,chrX	+,-	ZFP92,TREX2	-5343,22432
chr22:51065816-51066303	chr22	+	51065841	51066302	True	NM_000487,NM_016431,NM_001085428,NM_001085426,NM_001085427,NM_001085425	chr22,chr22,chr22,chr22,chr22,chr22	-,+,-,-,-,-	ARSA,MAPK8IP2,ARSA,ARSA,ARSA,ARSA	349,-24330,349,349,349,349
chr8:68865048-68865424	chr8	+	68865158	68865404	True	NM_024870,NM_020361,NM_025170	chr8,chr8,chr8	+,-,+	PREX2,CPA6,PREX2	-611,-206538,-611
chr5:176563753-176564280	chr5	+	176564018	176564307	True	NM_172349,NM_022455,NM_001199298	chr5,chr5,chr5	+,+,-	NSD1,NSD1,UIMC1	-3998,-3245,-130223
chr6:150391892-150392514	chr6	+	150391942	150392394	True	NM_030949,NM_024518	chr6,chr6	+,-	PPP1R14C,ULBP3	71793,-1740
chr4:152086004-152086416	chr4	+	152086058	152086222	True	NR_000007,NM_001128924	chr4,chr4	+,-	SNORD73A,SH3D19	-61143,10538
chrX:130422658-130422913	chrX	+	130422795	130422961	True	NM_001170961,NM_001170962,NM_001170963,NM_144967,NM_205833,NM_001555	chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,+,-,-	IGSF1,IGSF1,IGSF1,ARHGAP36,IGSF1,IGSF1	492,492,124,-230630,492,492
chr12:50479359-50479583	chr12	+	50479528	50479598	True	NM_003076,NM_139071,NM_013277	chr12,chr12,chr12	+,+,-	SMARCD1,SMARCD1,RACGAP1	-596,-596,-60221
chr5:137515070-137516455	chr5	+	137515127	137516332	True	NM_005733,NM_139199,NM_001164326,NM_006696	chr5,chr5,chr5,chr5	+,-,-,-	KIF20A,BRD8,BRD8,BRD8	-761,-769,-769,-769
chr15:42385271-42386021	chr15	+	42385332	42386000	True	NM_198141,NM_178034	chr15,chr15	+,-	GANC,PLA2G4D	180365,802
chr5:180077272-180078184	chr5	+	180077395	180077899	True	NM_002020,NM_182925,NM_015455	chr5,chr5,chr5	-,-,+	FLT4,FLT4,CNOT6	-771,-771,-156029
chr12:110563493-110564598	chr12	+	110563637	110564522	True	NM_207435,NM_031473,NM_001143779,NM_014055	chr12,chr12,chr12,chr12	-,+,+,+	C12orf76,IFT81,IFT81,IFT81	-58137,-1556,-1556,-1556
chr7:42966390-42967359	chr7	+	42966413	42967251	True	NM_002787,NM_031903	chr7,chr7	-,+	PSMA2,MRPL32	4604,4687
chr10:15206554-15206756	chr10	+	15206553	15206751	True	NM_183005,NR_036506,NM_004808	chr10,chr10,chr10	+,-,-	RPP38,LOC100192204,NMT2	-67422,-9207,3994
chr1:16351300-16352408	chr1	+	16351476	16351898	True	NM_014424,NM_004070,NM_001042704	chr1,chr1,chr1	-,+,+	HSPB7,CLCNKA,CLCNKA	-6191,-3041,-3041
chr13:31194525-31194991	chr13	+	31194545	31195031	True	NM_005800,NM_002128	chr13,chr13	+,-	USPL1,HMGB1	-2766,-154464
chr1:16974345-16974583	chr3	-	49723741	49723803	False	NM_022064,NM_020998	chr3,chr3	+,-	RNF123,MST1	3186,2443
chr1:16974345-16974583	chr1	+	16974367	16974591	True	NR_027504,NR_026752	chr1,chr1	+,-	MST1P2,CROCCP2	-2349,-16966
chr1:16974345-16974583	chr1	-	17085929	17085979	False	NR_002729,NR_037446	chr1,chr1	-,+	MST1P9,MIR3675	5046,-78230
chr22:19141076-19141608	chr22	+	19141211	19141571	True	NM_005315,NM_053006,NM_022719	chr22,chr22,chr22	-,+,-	GSC2,TSSK2,DGCR14	-3415,-22944,-9021
chr2:88272078-88272502	chr2	+	88272258	88272544	True	NM_198274,NM_001024457	chr2,chr2	+,-	SMYD1,RGPD1	94754,12815
chr2:88272078-88272502	chr2	+	74687063	74687113	False	NM_001146158,NM_006302,NM_031288,NM_012477,NR_037849	chr2,chr2,chr2,chr2,chr2	-,-,+,+,+	MOGS,MOGS,INO80B,WBP1,INO80B-WBP1	5474,5474,-4964,-1587,-4964
chr2:88272078-88272502	chr2	-	87157507	87157727	False	NM_004931,NM_001024457	chr2,chr2	-,+	CD8B,RGPD1	-68460,-12820
chr7:140909047-140910185	chr7	+	140909103	140909943	True	NM_053035,NM_001195278	chr7,chr7	-,+	MRPS33,LOC100131199	-194322,-135122
chr1:241679033-241679838	chr1	+	241679032	241679707	True	NM_003679,NM_000143	chr1,chr1	+,-	KMO,FH	15972,3428
chr8:85096305-85096685	chr8	+	85096334	85096726	True	NM_001099670,NM_001100391,NM_173848,NM_001100393,NM_001100392	chr8,chr8,chr8,chr8,chr8	-,+,+,+,+	C8orf59,RALYL,RALYL,RALYL,RALYL	1035967,373,-809,-942,-942
chr11:66446381-66447049	chr11	+	66446494	66446745	True	NM_001198844,NM_031492	chr11,chr11	+,-	RBM4,RBM4B	-40457,-1219
chr2:72375061-72375579	chr2	+	72375311	72375461	True	NM_019885,NM_001130987	chr2,chr2	-,+	CYP26B1,DYSF	-348,-681530
chr22:24997747-24997979	chr22	+	24997783	24997995	True	NM_005265,NM_207644,NM_001032365,NM_001032364	chr22,chr22,chr22,chr22	+,-,+,+	GGT1,C22orf36,GGT1,GGT1	1184,-8748,5630,1128
chr19:53449840-53450042	chr19	+	53449979	53450047	True	NM_152473,NR_037805	chr19,chr19	+,-	HERV-V1,ZNF321	67296,-4132
chr16:55854355-55855411	chr16	+	55854434	55855228	True	NR_003276,NM_001025194	chr16,chr16	+,-	CES1P1,CES1	-59974,11897
chr17:16594131-16594933	chr17	+	16594161	16594738	True	NM_020787,NM_014695	chr17,chr17	-,+	ZNF624,CCDC144A	-36994,-580
chr17:16594131-16594933	chr17	-	18527494	18528307	False	NR_036647,NM_001037330	chr17,chr17	-,+	CCDC144B,TRIM16L	680,97094
chr17:16594131-16594933	chr17	-	20798382	20798540	False	NM_001004306,NM_015510	chr17,chr17	-,+	CCDC144NL,DHRS7B	971,231717
chr17:16594131-16594933	chr17	+	20225082	20225916	False	NM_001042685,NR_023380	chr17,chr17	-,+	LGALS9B,CCDC144C	144982,-653
chr17:44657411-44657812	chr17_ctg5_hap1	-	390930	391256	False	NM_001039083,NM_001113738,NM_001103154,NM_016632,NM_006178	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	+,+,+,+,-	ARL17B,ARL17A,ARL17B,ARL17A,NSF	355,326,355,326,-10315
chr17:44657411-44657812	chr17_ctg5_hap1	+	1514210	1514536	False	NM_016632,NR_033799	chr17_ctg5_hap1,chr17_ctg5_hap1	-,+	ARL17A,NSFP1	-326,10376
chr17:44657411-44657812	chr17	+	44657414	44657740	True	NM_001113738,NM_016632,NM_006178	chr17,chr17,chr17	-,-,+	ARL17A,ARL17A,NSF	-326,-326,10297
chr17:44657411-44657812	chr17	+	44439489	44439778	False	NM_001039083,NM_001113738,NM_001103154,NM_016632,NR_033799	chr17,chr17,chr17,chr17,chr17	-,-,-,-,+	ARL17B,ARL17A,ARL17B,ARL17A,NSFP1	-355,-326,-355,-326,10400
chr20:34232918-34233953	chr20	+	34233022	34233802	True	NM_003915,NM_003116	chr20,chr20	-,+	CPNE1,SPAG4	8081,-29271
chr21:36058422-36059607	chr21	+	36058842	36059620	True	NM_004414,NM_053277	chr21,chr21	-,+	RCAN1,CLIC6	-71460,-17205
chr20:51591810-51592582	chr20	+	51591847	51592522	True	NM_006526,NM_173485	chr20,chr20	-,+	ZNF217,TSHZ2	607175,-2965
chr4:74123689-74124151	chr4	+	74123696	74124052	True	NM_032217,NM_000477,NM_198889	chr4,chr4,chr4	-,+,-	ANKRD17,ALB,ANKRD17	500,145919,500
chr20:38615250-38616715	chr20	+	38615303	38616518	True	NR_033905,NM_005461	chr20,chr20	+,-	DHX35,MAFB	-1024373,701411
chr6:82959594-82960461	chr6	+	82959700	82960150	True	NM_006670,NM_015525	chr6,chr6	+,-	TPBG,IBTK	112772,-2252
chr22:33396961-33398067	chr22	+	33396982	33398116	True	NM_003490,NM_000362,NM_133633	chr22,chr22,chr22	-,+,-	SYN3,TIMP3,SYN3	4740,-200231,4740
chr12:124020576-124021328	chr12	+	124020858	124020992	True	NR_037470,NM_178314	chr12,chr12	+,-	MIR3908,RILPL1	-19,-2593
chr2:68386208-68386669	chr2	+	68386208	68386710	True	NM_138458,NM_020143	chr2,chr2	-,+	WDR92,PNO1	-1552,-1263
chr12:6658064-6658441	chr12	+	6658128	6658444	True	NM_001039670,NM_001193457,NM_080730,NR_036467,NM_002046	chr12,chr12,chr12,chr12,chr12	-,-,-,-,+	IFFO1,IFFO1,IFFO1,IFFO1,GAPDH	6855,6855,6855,6855,-14522
chr11:6243728-6244838	chr11	+	6243776	6244688	True	NM_001037329,NM_001098794	chr11,chr11	+,-	CNGA4,FAM160A2	15641,11303
chr10:72143072-72144577	chr10	+	72143194	72144433	True	NM_018239,NM_207119,NM_018205,NM_004096	chr10,chr10,chr10,chr10	-,-,-,+	LRRC20,LRRC20,LRRC20,EIF4EBP2	-812,-1780,-812,19427
chr15:67428962-67430414	chr15	+	67428963	67430426	True	NM_001145103,NM_024666	chr15,chr15	+,-	SMAD3,AAGAB	40,116698
chr3:12594506-12595769	chr3	+	12594534	12595619	True	NM_001195279,NM_014160	chr3,chr3	-,+	LOC100129480,MKRN2	-7571,2974
chr11:126139148-126139608	chr11	+	126139176	126139595	True	NM_001177842,NR_037648,NM_003139,NM_017547,NR_037647	chr11,chr11,chr11,chr11,chr11	-,+,-,+,+	SRPR,FOXRED1,SRPR,FOXRED1,FOXRED1	-299,-187,-299,-292,-292
chr3:160823152-160823497	chr3	+	160823220	160823437	True	NM_001038628,NM_033168,NM_033169,NM_033167,NM_003781,NM_015938	chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,-,+	B3GALNT1,B3GALNT1,B3GALNT1,B3GALNT1,B3GALNT1,NMD3	-60,-60,-537,-60,-60,115661
chr17:73581850-73582959	chr17	+	73582278	73582828	True	NR_003587,NM_020753	chr17,chr17	+,-	MYO15B,CASKIN2	1310,-70651
chr8:27337295-27337568	chr8	+	27337294	27337584	True	NM_001979,NM_000742	chr8,chr8	+,-	EPHX2,CHRNA2	11060,-481
chr19:54565696-54566446	chr19	+	54566153	54566295	True	NM_198481,NM_004542	chr19,chr19	-,+	VSTM1,NDUFA3	972,39864
chr8:121417078-121418716	chr8	+	121417189	121418729	True	NM_022045,NM_014078	chr8,chr8	+,-	MTBP,MRPL13	38936,38968
chr1:2458216-2458874	chr1	+	2458240	2458638	True	NM_018216,NM_003820,NM_001010926	chr1,chr1,chr1	-,+,-	PANK4,TNFRSF14,HES5	-205,29166,3096
chr17:10455021-10456707	chr17	+	10455378	10456552	True	NM_001100112,NM_020233,NM_017534	chr17,chr17,chr17	-,+,-	MYH2,C17orf48,MYH2	-2438,144374,-2361
chr1:65612030-65612433	chr1	+	65612031	65612444	True	NM_203464,NM_001005353,NM_013410,NR_029516	chr1,chr1,chr1,chr1	+,+,+,-	AK4,AK4,AK4,MIR101-1	787,1068,1405,-87840
chr4:77069193-77069431	chr4	+	77069221	77069379	True	NM_001179,NM_017426	chr4,chr4	+,-	ART3,NUP54	-73409,326
chr12:9911263-9911616	chr12	+	9911269	9911505	True	NR_026671,NM_001781,NR_026672,NM_016523	chr12,chr12,chr12,chr12	-,-,-,+	CD69,CD69,CD69,KLRF1	2042,2042,2042,68571
chr22:31740073-31740472	chr22	+	31740117	31740517	True	NM_014323,NM_004147,NM_032051,NM_032050,NM_032052	chr22,chr22,chr22,chr22,chr22	-,+,-,-,-	PATZ1,DRG1,PATZ1,PATZ1,PATZ1	1782,55021,1782,1782,1782
chr20:62328192-62328469	chr20	+	62328324	62328518	True	NM_001134758,NM_003823	chr20,chr20	-,+	ARFRP1,TNFRSF6B	10887,-371
chr7:139053374-139053947	chr7	+	139053612	139053991	True	NM_016019,NR_033999	chr7,chr7	+,-	LUC7L2,LOC100129148	-9037,58331
chr16:2259921-2260198	chr16	+	2259948	2260228	True	NM_001199174,NM_001199175,NM_001199173,NM_182563,NM_022372,NM_001042371	chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,-,+,-	MLST8,MLST8,MLST8,C16orf79,MLST8,PGP	-4267,-4821,-4821,891,-4821,4644
chr22:25358444-25358775	chr22	+	25358531	25358687	True	NM_001145206,NM_001001663	chr22,chr22	+,-	KIAA1671,TMEM211	65253,-23217
chr9:133322105-133322974	chr9	+	133322222	133322838	True	NM_000050,NR_027440,NM_054012	chr9,chr9,chr9	+,-,+	ASS1,LOC100272217,ASS1	-2180,132093,-2180
chr3:186431675-186433469	chr3	+	186432064	186433234	True	NM_001102416,NM_002916,NM_001166451,NM_000893	chr3,chr3,chr3,chr3	+,-,+,+	KNG1,RFC4,KNG1,KNG1	1863,91106,1863,1863
chr8:126104070-126104281	chr8	+	126104070	126104216	True	NM_014846,NM_173685	chr8,chr8	-,+	KIAA0196,NSMCE2	-9,-38
chr9:139781981-139782480	chr9	+	139782018	139782222	True	NM_153200,NM_021138	chr9,chr9	-,+	EDF1,TRAF2	-21280,-1104
chr8:99440745-99441457	chr8	+	99440804	99441476	True	NM_024759,NM_020697	chr8,chr8	-,+	NIPAL2,KCNS2	-134183,-1605
chr10:103577968-103578220	chr10	+	103578017	103578237	True	NR_036114,NM_012215,NM_001142434	chr10,chr10,chr10	+,-,-	MIR3158-1,MGEA5,MGEA5	-216894,35,35
chr13:46640902-46642848	chr13	+	46641436	46642172	True	NM_015070,NM_152719	chr13,chr13	-,+	ZC3H13,SPERT	-14542,-365050
chr5:33936305-33936929	chr5	+	33936402	33936966	True	NM_016568,NM_030955	chr5,chr5	+,-	RXFP3,ADAMTS12	38,-44278
chr13:95248057-95248319	chr13	+	95248063	95248345	True	NM_014305,NM_180989	chr13,chr13	-,+	TGDS,GPR180	216,5758
chr1:238025467-238025869	chr1	+	238025466	238025836	True	NR_027247,NM_021186	chr1,chr1	+,-	LOC100130331,ZP4	-42,28436
chr2:69747792-69748002	chr2	+	69747805	69747981	True	NR_003705,NM_001153	chr2,chr2	-,+	SNORA36C,ANXA4	-502,221145
chr19:39468781-39469127	chr19	+	39468820	39469104	True	NM_024907,NM_033363	chr19,chr19	-,+	FBXO17,MRPS12	-2440,-47277
chr3:193938568-193938846	chr3	+	193938572	193938820	True	NR_024480,NM_005524	chr3,chr3	-,+	LOC100131551,HES1	91823,-84700
chrX:37893944-37894698	chrX	+	37893962	37894407	True	NM_001163334,NM_001170750	chrX,chrX	+,-	SYTL5,SRPX	-1226,185830
chr2:136742451-136742703	chr2	+	136742502	136742672	True	NM_001349,NM_014607	chr2,chr2	-,+	DARS,UBXN4	600,-243377
chr1:28970454-28970935	chr1	+	28970596	28970958	True	NM_001135218,NM_005644,NR_004407	chr1,chr1,chr1	-,-,+	TAF12,TAF12,RNU11	-992,-992,4153
chr13:21835555-21835920	chr13	+	21835574	21835944	True	NM_145061,NM_024026	chr13,chr13	-,+	SKA3,MRP63	-84833,-85253
chr13:21835555-21835920	chr13	-	20133930	20134300	False	NM_199254,NM_017520	chr13,chr13	-,+	TPTE2,MPHOSPH8	-23027,73487
chr13:21835555-21835920	chr11	+	64083384	64083438	False	NM_181652,NM_012094,NM_016404,NM_181651	chr11,chr11,chr11,chr11	+,+,-,+	PRDX5,PRDX5,TRMT112,PRDX5	2130,2130,1645,2130
chr7:102389939-102390527	chr7	+	102390157	102390565	True	NM_032959,NR_026879,NM_001145269,NM_001145268	chr7,chr7,chr7,chr7	-,+,+,+	POLR2J2,FAM185A,FAM185A,FAM185A	-77975,-814,-814,-814
chr2:224703629-224704313	chr2	+	224703734	224704130	True	NM_022915,NM_001039569	chr2,chr2	+,-	MRPL44,AP1S3	117990,-1415
chr14:64319231-64319467	chr14	+	64319233	64319365	True	NM_182914,NM_015180,NM_030791	chr14,chr14,chr14	+,+,-	SYNE2,SYNE2,SGPP1	317,317,-124477
chr7:114563116-114563365	chr7	+	114563183	114563401	True	NM_002711,NM_001166346,NM_001166345,NM_199072	chr7,chr7,chr7,chr7	-,+,+,+	PPP1R3A,MDFIC,MDFIC,MDFIC	-1004101,-1025,-1025,-1025
chr5:72922810-72924428	chr5	+	72923054	72924183	True	NM_001177693,NM_023039,NM_001080479	chr5,chr5,chr5	+,-,+	RGNEF,ANKRA2,RGNEF	-1122,-61543,-1122
chr19:36248018-36248403	chr19	+	36248018	36248320	True	NM_019104,NM_001039887,NM_144617	chr19,chr19,chr19	+,+,-	LIN37,C19orf55,HSPB6	-8561,723,-88
chr11:13688127-13689376	chr11	+	13688146	13689395	True	NM_032228,NM_000315	chr11,chr11	+,-	FAR1,PTH	810,-170579
chr10:74449689-74450321	chr10	+	74449695	74450302	True	NM_138357,NM_006077	chr10,chr10	+,-	CCDC109A,CBARA1	1586,-63746
chr15:81078618-81080047	chr15	+	81079094	81080062	True	NM_018689,NR_030393	chr15,chr15	+,-	KIAA1199,MIR549	-7439,54402
chr8:39774058-39776034	chr8	+	39774206	39775748	True	NM_001464,NM_002164	chr8,chr8	-,+	ADAM2,IDO1	-78427,-2945
chr12:110338919-110339214	chr12	+	110338987	110339250	True	NM_032300,NM_016433,NM_001143852	chr12,chr12,chr12	+,-,+	TCHP,GLTP,TCHP	-715,-20694,-959
chr1:119638214-119639977	chr1	+	119638368	119640025	True	NM_001005783,NM_015836	chr1,chr1	+,-	HAO2,WARS2	271376,43322
chr17:4675949-4677227	chr17	+	4676708	4677034	True	NM_001144939,NM_003963	chr17,chr17	-,+	VMO1,TM4SF5	12745,-1579
chr21:43823306-43824153	chr21	+	43823458	43824116	True	NM_018961,NM_024022,NM_032405,NM_001001895	chr21,chr21,chr21,chr21	+,-,-,+	UBASH3A,TMPRSS3,TMPRSS3,UBASH3A	58,-7258,-7258,58
chrX:118828460-118829382	chrX	+	118828682	118829038	True	NM_145802,NM_145799,NM_145800,NM_001105576,NM_015129	chrX,chrX,chrX,chrX,chrX	-,-,-,+,-	SEPT6,SEPT6,SEPT6,ANKRD58,SEPT6	-1349,-1349,-1349,63537,-1349
chr1:1823207-1823421	chr1	+	1823299	1823381	True	NM_002074,NM_138705	chr1,chr1	-,+	GNB1,CALML6	-773,22884
chr1:3370292-3370574	chr1	+	3370332	3370500	True	NR_030277,NM_014448	chr1,chr1	-,+	MIR551A,ARHGEF16	106904,646
chrX:152941313-152942038	chrX	+	152941691	152941978	True	NM_001142805,NM_001039582,NM_001135740	chrX,chrX,chrX	+,-,-	SLC6A8,PNCK,PNCK	11773,-1875,-2948
chr20:31616330-31618182	chr20	+	31616715	31617961	True	NM_080675,NM_174897	chr20,chr20	-,+	SUN5,BPIL3	-24476,1492
chr2:101618980-101619640	chr2	+	101619116	101619658	True	NM_001098577,NM_000993,NM_001099693,NM_001102426	chr2,chr2,chr2,chr2	+,+,+,-	RPL31,RPL31,RPL31,TBC1D8	-476,-476,-476,148238
chr20:37433894-37434165	chr20	+	37434021	37434184	True	NM_001172735,NR_027241,NM_015568	chr20,chr20,chr20	+,-,+	PPP1R16B,LOC388796,PPP1R16B	163,-370003,163
chr3:49822906-49823327	chr3	+	49823008	49823278	True	NM_153273,NM_001006115,NM_203370	chr3,chr3,chr3	-,-,+	IP6K1,IP6K1,C3orf54	745,745,17408
chr15:65357225-65357706	chr15	+	65357294	65357626	True	NM_016563,NM_001101362	chr15,chr15	-,+	RASL12,KBTBD13	2812,11527
chr11:63534569-63535121	chr11	+	63534767	63535060	True	NM_138471,NM_001144936	chr11,chr11	+,-	C11orf84,C11orf95	45862,1103
chr1:114517850-114519482	chr1	+	114517850	114519467	True	NM_006594,NM_020190	chr1,chr1	-,+	AP4B1,OLFML3	-70109,2562
chr4:16903995-16904467	chr4	+	16904100	16904446	True	NM_001130834,NM_001079827,NM_001290	chr4,chr4,chr4	-,+,-	LDB2,CLRN2,LDB2	-3676,612341,-3676
chr1:51967241-51968984	chr1	+	51967428	51969010	True	NM_001981,NM_024586	chr1,chr1	-,+	EPS15,OSBPL9	16046,113535
chr5:172087240-172088744	chr5	+	172087532	172088602	True	NM_001142651,NM_004417	chr5,chr5	+,-	NEURL1B,DUSP1	-19307,109651
chr3:114014595-114015902	chr3	+	114014649	114015677	True	NR_030293,NM_173799	chr3,chr3	-,+	MIR568,TIGIT	19803,-1867
chr19:21691093-21692094	chr19	+	21691094	21691569	True	NM_001001415,NM_021269	chr19,chr19	+,-	ZNF429,ZNF708	-2708,-178882
chr19:46498438-46498693	chr19	+	46498463	46498693	True	NM_002516,NM_001080402	chr19,chr19	-,+	NOVA2,CCDC61	-21806,-182
chr1:152552220-152552842	chr1	+	152552413	152552779	True	NM_178434,NM_032563	chr1,chr1	+,-	LCE3C,LCE3D	20358,251
chr12:56551677-56552164	chr12	+	56551694	56552152	True	NM_021019,NM_002475,NM_079423,NM_001130420,NM_001199629	chr12,chr12,chr12,chr12,chr12	+,+,+,-,+	MYL6,MYL6B,MYL6,SMARCC2,MYL6B	-28,-5541,-28,31249,-5541
chr12:8976103-8976356	chr12	+	8976103	8976401	True	NM_144670,NM_002355	chr12,chr12	+,-	A2ML1,M6PR	-1004,125901
chr1:213032064-213032280	chr1	+	213032138	213032254	True	NM_014053,NR_027286,NR_027285	chr1,chr1,chr1	+,-,-	FLVCR1,NCRNA00292,NCRNA00292	-592,-658,-658
chr17:29298074-29298400	chr17	+	29298112	29298386	True	NM_001184992,NM_197939,NM_024683,NM_032322,NR_002221	chr17,chr17,chr17,chr17,chr17	+,+,-,+,+	RNF135,RNF135,C17orf42,RNF135,DPRXP4	-207,-207,-64826,-207,3966
chr3:119812232-119812803	chr3	+	119812259	119812823	True	NM_002093,NM_001146156,NM_022002	chr3,chr3,chr3	-,-,+	GSK3B,GSK3B,NR1I2	491,491,-310753
chr11:134147860-134149418	chr11	+	134147937	134149141	True	NM_001080407,NM_199298	chr11,chr11	+,-	GLB1L3,THYN1	-1713,-24677
chr12:12871136-12871824	chr12	+	12871221	12871535	True	NM_004064,NM_006143,NM_001130415	chr12,chr12,chr12	+,-,+	CDKN1B,GPR19,APOLD1	-970,-22100,7315
chr19:21581481-21582053	chr19	+	21581523	21581932	True	NM_175910,NM_145326,NM_001076678,NM_021269	chr19,chr19,chr19,chr19	+,+,+,-	ZNF493,ZNF493,ZNF493,ZNF708	-1654,-1654,-1654,-69311
chr19:45579770-45580508	chr19	+	45579851	45580520	True	NM_145288,NM_001007269,NM_001007270,NM_024707	chr19,chr19,chr19,chr19	-,+,+,+	ZNF296,GEMIN7,GEMIN7,GEMIN7	-163,2009,1997,2009
chr19:35530891-35531162	chr19	+	35530891	35531063	True	NM_199037,NM_001037,NM_182983,NR_024561,NM_002151	chr19,chr19,chr19,chr19,chr19	+,+,+,-,+	SCN1B,SCN1B,HPN,LOC100128675,HPN	-9350,-9350,346,66162,346
chr13:114456311-114456708	chr13	+	114456332	114456696	True	NM_182614,NR_028064	chr13,chr13	+,-	FAM70B,LOC100130386	5519,-2270
chr16:2186102-2186694	chr16	+	2186141	2186385	True	NM_001009944,NM_000296,NR_037467,NM_014353	chr16,chr16,chr16,chr16	-,-,-,+	PKD1,PKD1,MIR3180-5,RAB26	-242,-242,-11,12265
chr7:99955787-99956532	chr7	+	99955972	99956562	True	NM_178238,NR_003613	chr7,chr7	+,-	PILRB,PMS2P1	-397,-22042
chr7:99955787-99956532	chr7	+	99971836	99971916	False	NM_178273,NR_003613,NM_178272,NM_013439	chr7,chr7,chr7,chr7	+,-,+,+	PILRA,PMS2P1,PILRA,PILRA	-819,-37906,-819,-819
chr15:43590550-43590873	chr15	+	43590556	43590635	True	NM_001012969,NM_052955	chr15,chr15	+,-	ADAL,TGM7	32236,3871
chr19:51138790-51140533	chr19	+	51138860	51140284	True	NM_001160328,NM_001195076,NM_001160329,NM_032298	chr19,chr19,chr19,chr19	-,+,-,-	SYT3,LOC342918,SYT3,SYT3	2858,12417,2858,1068
chr20:5938937-5939587	chr20	+	5939056	5939296	True	NM_015939,NM_032485,NM_182802	chr20,chr20,chr20	-,+,+	TRMT6,MCM8,MCM8	-7883,-7819,-7819
chr17:75282396-75282870	chr17	+	75282411	75282843	True	NM_001113492,NM_001113491,NR_036200	chr17,chr17,chr17	+,+,-	SEPT9,SEPT9,MIR4316	1129,-4970,110343
chr19:51220254-51220661	chr19	+	51220264	51220622	True	NM_016148,NM_002975	chr19,chr19	-,+	SHANK1,CLEC11A	-69,5982
chr4:176984470-176984737	chr4	+	176984478	176984797	True	NM_170710,NM_201592,NM_181265	chr4,chr4,chr4	+,-,+	WDR17,GPM6A,WDR17	2187,-60830,2187
chr2:177050959-177051313	chr2	+	177051026	177051265	True	NM_024501,NR_033979	chr2,chr2	+,-	HOXD1,LOC401022	2041,2472
chr22:45065771-45066032	chr22	+	45065846	45066062	True	NM_032287,NM_001198721,NM_001017528,NM_001017529,NM_001017530,NM_015366	chr22,chr22,chr22,chr22,chr22,chr22	-,+,+,+,+,+	LDOC1L,PRR5,PRR5,PRR5,PRR5,PRR5	-171841,6625,-1471,-1471,6625,6625
chr17:36453784-36454527	chr17	+	36454134	36454558	True	NR_036750,NM_032351	chr17,chr17	-,+	LOC440434,MRPL45	-40878,-1187
chr17:36453784-36454527	chr17	-	45568414	45568752	False	NR_033934,NM_006310	chr17,chr17	-,+	MRPL45P2,NPEPPS	1291,39691
chr8:54936657-54938544	chr8	+	54936728	54938382	True	NM_201437,NM_014175,NM_006756	chr8,chr8,chr8	-,+,-	TCEA1,MRPL15,TCEA1	-1720,109398,-1720
chr17:7493740-7494049	chr17	+	7493831	7494073	True	NM_004870,NM_006942,NR_024603	chr17,chr17,chr17	+,-,+	MPDU1,SOX15,MPDU1	-6917,-343,-6917
chr18:20731984-20732607	chr18	+	20732016	20732349	True	NM_138375,NM_032933	chr18,chr18	+,-	CABLES1,C18orf45	3439,285633
chr17:76376240-76377085	chr17	+	76376333	76376711	True	NM_003955,NM_024419	chr17,chr17	-,+	SOCS3,PGS1	-20175,-1649
chr8:61430224-61430598	chr8	+	61430398	61430636	True	NM_002865,NM_004056	chr8,chr8	+,-	RAB2A,CA8	-890,-236444
chr12:8278192-8279367	chr12	+	8278267	8279359	True	NM_016184,NM_194450,NR_036440,NM_194447,NM_194448	chr12,chr12,chr12,chr12,chr12	+,+,-,+,+	CLEC4A,CLEC4A,POU5F1P3,CLEC4A,CLEC4A	-2097,-2097,8147,-2097,-2097
chr19:49377038-49377906	chr19	+	49377065	49377873	True	NM_020904,NM_014330,NM_001161354	chr19,chr19,chr19	-,+,-	PLEKHA4,PPP1R15A,PLEKHA4	-5181,-1467,-5181
chr4:153866225-153866816	chr4	+	153866232	153866442	True	NM_033393,NM_145720	chr4,chr4	+,-	FHDC1,TIGD4	-2148,-165316
chr11:62607309-62607564	chr11	+	62607309	62607477	True	NM_003164,NM_018093,NM_001012662	chr11,chr11,chr11	-,-,+	STX5,WDR74,SLC3A2	-7749,204,16006
chrX:101906220-101906581	chrX	+	101906402	101906462	True	NM_021992,NM_014710,NM_001099410,NM_001184727,NM_001099411	chrX,chrX,chrX,chrX,chrX	-,+,+,+,+	TMSB15A,GPRASP1,GPRASP1,GPRASP1,GPRASP1	-134703,-159,-159,-124,-159
chr19:29397895-29398622	chr19	+	29398052	29398656	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	57381,305530
chrX:153707200-153707427	chrX	+	153707215	153707431	True	NM_014235,NM_017514,NM_006014	chrX,chrX,chrX	-,+,-	UBL4A,PLXNA3,LAGE3	7551,-20643,215
chr7:141536338-141536864	chr7	+	141536367	141536894	True	NM_018980,NM_001008270,NM_001171951	chr7,chr7,chr7	+,-,-	TAS2R5,PRSS37,PRSS37	-46401,4386,4386
chr6:116936017-116937625	chr6	+	116936569	116937615	True	NM_145062,NM_001161664,NM_001010892	chr6,chr6,chr6	-,+,+	ZUFSP,RSPH4A,RSPH4A	52408,26,26
chr2:173420199-173420567	chr2	+	173420217	173420391	True	NR_026995,NM_002610	chr2,chr2	-,+	LOC91149,PDK1	180593,387
chr21:42792701-42793939	chr21	+	42793827	42793933	True	NM_002462,NM_001135099,NM_001178046,NM_001144925	chr21,chr21,chr21,chr21	+,-,+,+	MX1,TMPRSS2,MX1,MX1	4044,86109,4169,-1358
chr3:10203778-10205445	chr3	+	10203875	10205034	True	NM_001570,NM_001164839	chr3,chr3	+,-	IRAK2,C3orf24	1528,-53960
chr11:13484800-13485198	chr11	+	13484813	13485227	True	NM_001178,NM_032320	chr11,chr11	+,-	ARNTL,BTBD10	-185539,25
chr10:126149983-126150275	chr10	+	126150135	126150259	True	NM_001146340,NM_022126,NM_001167880	chr10,chr10,chr10	-,+,+	NKX1-2,LHPP,LHPP	-11585,81,81
chr18:40672081-40673755	chr18	+	40672116	40673778	True	NM_002647,NM_002930	chr18,chr18	+,-	PIK3C3,RIT2	-1136968,21929
chr16:68276728-68277205	chr16	+	68276807	68277055	True	NM_024939,NM_012320	chr16,chr16	-,+	ESRP2,PLA2G15	-6671,2191
chr3:133647695-133648439	chr3	+	133647709	133648471	True	NM_021203,NM_025041	chr3,chr3	+,-	SRPRB,C3orf36	-144884,235
chr20:62169735-62170000	chr20	+	62169882	62169968	True	NM_005975,NM_024059,NM_080823	chr20,chr20,chr20	-,+,-	PTK6,C20orf195,SRMS	-1175,14404,8939
chr1:204122718-204122962	chr1	+	204122756	204123010	True	NM_018208,NM_005686	chr1,chr1	-,+	ETNK2,SOX13	-1449,-80564
chr4:122291695-122293502	chr4	+	122291784	122293448	True	NM_198179,NR_024365	chr4,chr4	-,+	QRFPR,LOC100192379	8783,392291
chr5:156773544-156774373	chr5	+	156773696	156774374	True	NM_001001343,NM_014376	chr5,chr5	-,+	FNDC9,CYFIP2	-967,-77385
chr20:23111156-23112461	chr20	+	23111281	23112469	True	NR_034149,NM_001052	chr20,chr20	-,+	LOC200261,SSTR4	854,-95275
chr1:153526721-153527064	chr1	+	153526724	153527108	True	NM_002960,NM_019554,NM_002961,NM_006271	chr1,chr1,chr1,chr1	-,-,-,+	S100A3,S100A4,S100A4,S100A1	-4990,-8442,-8442,73764
chr4:126236387-126236592	chr4	+	126236403	126236553	True	NM_024582,NM_001167882	chr4,chr4	+,-	FAT4,ANKRD50	1013,-602516
chr6:133031683-133033379	chr6	+	133032350	133032988	True	NM_004666,NM_001016	chr6,chr6	-,+	VNN1,RPS12	2268,102719
chr3:197678727-197679131	chr3	+	197678775	197679009	True	NR_026787,NR_026786,NM_001134435,NM_032263,NM_000996,NM_001136049,NM_033029	chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,-,-,+,+,+	LMLN,LMLN,IQCG,IQCG,RPL35A,LMLN,LMLN	8061,8061,-1979,7933,-1774,8061,8061
chr12:22697345-22697690	chr12	+	22697352	22697686	True	NM_014802,NM_001039481	chr12,chr12	-,+	KIAA0528,ETNK1	-90,80389
chr6:44225821-44226902	chr6	+	44225832	44226681	True	NM_001137560,NM_004556,NM_007355,NM_178148	chr6,chr6,chr6,chr6	+,-,+,-	TMEM151B,NFKBIE,HSP90AB1,SLC35B2	11798,6894,-11035,-549
chr4:2845423-2845675	chr4	+	2845486	2845588	True	NM_014190,NM_176801,NM_024309,NM_014189,NM_001119	chr4,chr4,chr4,chr4,chr4	+,+,-,+,+	ADD1,ADD1,TNIP2,ADD1,ADD1	-5,-5,-87383,-5,-5
chr12:52342557-52344099	chr12	+	52342637	52344146	True	NM_020328,NM_001013690,NM_004302,NM_020327	chr12,chr12,chr12,chr12	+,-,+,+	ACVR1B,FIGNL2,ACVR1B,ACVR1B	1304,-116936,1304,3017
chr2:97509435-97509661	chr2	+	97509555	97509641	True	NM_144994,NM_199078	chr2,chr2	-,+	ANKRD23,CNNM3	167,-27622
chrX:151287716-151288270	chrX	+	151287887	151288227	True	NM_001011550,NM_021049	chrX,chrX	+,-	MAGEA4,MAGEA5	-201178,-1443
chr15:59044342-59045178	chr15	+	59044731	59044981	True	NM_001040450,NM_001110	chr15,chr15	+,-	FAM63B,ADAM10	18411,-2554
chr3:119500333-119500900	chr3	+	119500486	119500905	True	NM_033013,NM_005694,NM_022002,NM_003889	chr3,chr3,chr3,chr3	+,-,+,+	NR1I2,COX17,NR1I2,NR1I2	-1219,-104243,651,-1219
chr8:17776516-17777366	chr8	+	17776735	17777174	True	NM_006197,NM_201552	chr8,chr8	+,-	PCM1,FGL1	3191,-23688
chr19:36344253-36345314	chr19	+	36344261	36344363	True	NM_199180,NM_004646,NM_032123,NM_199179	chr19,chr19,chr19,chr19	+,-,+,+	KIRREL2,NPHS1,KIRREL2,KIRREL2	3446,-1366,3446,3446
chr4:25560669-25561535	chr4	+	25561169	25561535	True	NM_015187,NM_001177998	chr4,chr4	-,+	SEL1L3,SLC34A2	303125,95899
chr14:55370692-55371258	chr14	+	55370825	55371062	True	NM_001024070,NM_001024071,NM_001024024,NM_000161,NM_080867	chr14,chr14,chr14,chr14,chr14	-,-,-,-,+	GCH1,GCH1,GCH1,GCH1,SOCS4	-1283,-1283,-1283,-1283,122781
chr17:32693142-32694119	chr17	+	32693361	32694077	True	NM_005408,NM_002981	chr17,chr17	+,-	CCL13,CCL1	-9944,-3109
chr15:75075078-75075639	chr15	+	75075187	75075623	True	NM_000499,NM_001127190,NM_004383	chr15,chr15,chr15	-,+,+	CYP1A1,CSK,CSK	-57310,-813,-813
chr20:30537977-30539000	chr20	+	30538026	30538927	True	NM_030815,NM_001011718	chr20,chr20	-,+	PDRG1,XKR7	1007,16877
chr9:42469245-42469520	chr9	+	42469360	42469422	True	NR_003670,NR_026759	chr9,chr9	-,+	KGFLP2,FAM95B1	-449776,-822
chr9:42469245-42469520	chr9	-	43032478	43032540	False	NR_026759,NR_026558	chr9,chr9	-,+	FAM95B1,AQP7P3	822,-174377
chr9:42469245-42469520	chr9	+	69476788	69477213	False	NM_001085457,NM_001098805	chr9,chr9	-,+	CBWD6,ANKRD20A4	-214195,-94858
chr7:72723174-72723601	chr7	+	72723371	72723639	True	NM_148956,NM_001168348,NM_018044,NM_001135211,NM_001168347	chr7,chr7,chr7,chr7,chr7	-,-,-,+,-	NSUN5,NSUN5,NSUN5,FKBP6,NSUN5	-507,-507,-507,18515,-507
chr14:24769357-24770164	chr14	+	24769533	24770207	True	NM_019839,NM_138452,NM_001136050,NM_174913,NM_001164692	chr14,chr14,chr14,chr14,chr14	+,-,-,+,+	LTB4R2,DHRS1,DHRS1,C14orf21,LTB4R2	9149,-867,-494,-486,9149
chr5:75027087-75028469	chr5	+	75027356	75028345	True	NM_016218,NM_001099271	chr5,chr5	+,-	POLK,POC5	-219763,-14043
chr15:64337140-64338011	chr15	+	64337235	64337953	True	NM_003099,NM_014326	chr15,chr15	+,-	SNX1,DAPK2	50223,618
chr2:98703761-98705088	chr2	+	98703782	98705115	True	NM_015348,NM_144992	chr2,chr2	-,+	TMEM131,VWA3B	-91428,-238
chr7:153100475-153102239	chr7	+	153101123	153102181	True	NM_005431,NM_001039350	chr7,chr7	-,+	XRCC2,DPP6	-727873,482237
chr20:22566138-22566753	chr20	+	22566157	22566801	True	NM_021784,NM_153675,NR_001558,NM_001052	chr20,chr20,chr20,chr20	-,-,-,+	FOXA2,FOXA2,NCRNA00261,SSTR4	-1056,-56,-6877,449255
chr4:99850662-99850926	chr4	+	99850696	99850892	True	NM_001130678,NM_001130679,NM_015143,NM_001968	chr4,chr4,chr4,chr4	-,-,+,-	EIF4E,EIF4E,METAP1,EIF4E	-453,944,65895,944
chr12:774787-776113	chr12	+	775399	776149	True	NM_001184985,NM_016533	chr12,chr12	+,-	WNK1,NINJ2	85939,-2644
chr19:781953-782400	chr19	+	782209	782363	True	NM_024888,NM_002819	chr19,chr19	-,+	LPPR3,PTBP1	39639,15028
chr15:40458144-40459634	chr15	+	40458950	40459286	True	NM_001003940,NM_001211	chr15,chr15	-,+	BMF,BUB1B	-57875,-5798
chr1:145103912-145105140	chr1	+	145103913	145105161	True	NM_004892,NM_022359	chr1,chr1	+,-	SEC22B,PDE4DIP	-7557,-27727
chr2:191392163-191393788	chr2	+	191392171	191393691	True	NM_017694,NM_001142645,NM_005966	chr2,chr2,chr2	+,-,+	MFSD6,TMEM194B,NAB1	-119141,5827,120156
chr4:9649935-9651541	chr4	+	9650255	9651452	True	NR_031688,NM_000798	chr4,chr4	-,+	MIR548I2,DRD5	-92318,131805
chr5:149891221-149892493	chr5	+	149891367	149892473	True	NM_001025070,NM_001543	chr5,chr5	-,+	RPS14,NDST1	-62048,-3744
chr6:10833412-10835148	chr6	+	10833421	10834903	True	NM_001040274,NM_005906	chr6,chr6	+,-	SYCP2L,MAK	52160,-2311
chr14:100111818-100112189	chr14	+	100111947	100112213	True	NM_032425,NM_001127258,NM_001144995	chr14,chr14,chr14	+,+,-	HHIPL1,HHIPL1,CCDC85C	-518,-518,-41220
chr10:12085056-12085395	chr10	+	12085059	12085409	True	NM_018706,NM_080599,NM_015542	chr10,chr10,chr10	+,-,-	DHTKD1,UPF2,UPF2	25524,-36,-251
chr3:49978927-49979294	chr3	+	49979098	49979340	True	NM_001167582,NM_005777,NM_032355	chr3,chr3,chr3	+,+,-	RBM6,RBM6,MON1A	-1673,-1673,-11653
chr9:131872112-131872472	chr9	+	131872272	131872454	True	NR_028048,NM_000755,NM_178000,NM_021131,NM_178003,NM_001193397,NM_178001	chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,-,+,+,+,+,+	CRAT,CRAT,PPP2R4,PPP2R4,PPP2R4,PPP2R4,PPP2R4	666,666,1138,773,1138,1512,1138
chr20:1588528-1589121	chr20	+	1588559	1589049	True	NM_001083910,NM_001040022	chr20,chr20	-,+	SIRPB1,SIRPA	11690,285763
chr20:1588528-1589121	chr20	+	1555531	1556021	False	NM_014723,NM_178460	chr20,chr20	+,-	SNPH,SIRPD	-308622,-17188
chr9:100175435-100177056	chr9	+	100175461	100176935	True	NR_026847,NM_014290	chr9,chr9	-,+	LOC286359,TDRD7	-16488,-1217
chr20:236822-237298	chr20	+	236871	237337	True	NM_207469,NM_153269	chr20,chr20	+,-	DEFB132,C20orf96	1039,34103
chr12:69138211-69138907	chr12	+	69138455	69138831	True	NM_018656,NR_033335	chr12,chr12	+,-	SLC35E3,SNORA70G	1104,-117300
chr14:53018403-53018823	chr14	+	53018402	53018862	True	NM_020784,NM_001160047,NM_001099652	chr14,chr14,chr14	-,-,+	TXNDC16,TXNDC16,GPR137C	489,489,1003
chr5:110431406-110432256	chr5	+	110431439	110432136	True	NM_139281,NM_001039763	chr5,chr5	+,-	WDR36,TMEM232	-3633,-368989
chr6:150364984-150365576	chr6	+	150364995	150365444	True	NM_025218,NM_130900	chr6,chr6	+,-	ULBP1,RAET1L	-79903,-18327
chr9:130690889-130691246	chr9	+	130690895	130691211	True	NM_001135219,NM_001018078,NM_173492,NM_003863	chr9,chr9,chr9,chr9	-,+,-,-	PIP5KL1,FPGS,PIP5KL1,DPM2	1915,-125438,-1125,9602
chr20:10656608-10657364	chr20	+	10656836	10657350	True	NM_001009608,NM_000214	chr20,chr20	+,-	C20orf94,JAG1	-240937,-2142
chr8:27098192-27099135	chr8	+	27098298	27098786	True	NM_173174,NM_030795	chr8,chr8	+,-	PTK2B,STMN4	70212,17167
chr22:51017160-51017481	chr22	+	51017279	51017431	True	NM_001145137,NM_001145136,NM_001145135,NM_001145134,NR_021492,NM_005198,NM_152245,NR_027928,NM_004377,NM_152246	chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,+,-,-,-,-,-	CPT1B,CPT1B,CPT1B,CPT1B,LOC100144603,CHKB,CPT1B,CHKB-CPT1B,CPT1B,CPT1B	-773,-183,-183,-183,4023,4047,-183,4047,-385,-385
chr17:4851801-4852256	chr17	+	4851988	4852199	True	NM_001165418,NM_053013,NM_005022,NM_001165417,NM_003562,NM_001976,NM_001193503,NM_015528	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,-,-,-,+,+,+	SLC25A11,ENO3,PFN1,SLC25A11,SLC25A11,ENO3,ENO3,RNF167	-8526,2184,-163,-8526,-8526,2184,2184,-8409
chrX:152157055-152157476	chrX	+	152157135	152157472	True	NM_001184924,NM_001178115,NM_052926,NM_001103151,NM_001103150	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	PNMA5,ZNF185,PNMA5,PNMA5,PNMA5	5250,-46971,3340,3340,3340
chr2:152585018-152586133	chr2	+	152585143	152586180	True	NM_001164507,NM_001177665,NM_004543,NM_001164508	chr2,chr2,chr2,chr2	-,+,-,-	NEB,RIF1,NEB,NEB	4871,-318593,4871,4871
chr11:94838253-94838610	chr11	+	94838308	94838521	True	NM_144665,NM_015036	chr11,chr11	-,+	SESN3,ENDOD1	125788,-15388
chr6:10684414-10686354	chr6	+	10684586	10686303	True	NM_001145020,NR_026736,NR_026737,NM_017906	chr6,chr6,chr6,chr6	-,-,-,+	C6orf52,C6orf52,C6orf52,PAK1IP1	8586,8777,8586,8884
chr22:38084170-38084875	chr22	+	38084192	38084914	True	NM_006498,NM_024313,NM_001039141	chr22,chr22,chr22	-,+,+	LGALS2,NOL12,TRIOBP	-108168,-1899,8080
chr2:202555722-202557035	chr2	+	202555793	202556934	True	NM_033066,NM_139158	chr2,chr2	-,+	MPP4,CDK15	6541,114263
chr14:96856224-96856978	chr14	+	96856385	96856761	True	NM_152327,NM_018036	chr14,chr14	+,-	AK7,ATG2B	1686,-26707
chr21:44776583-44777634	chr21	+	44776687	44777653	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	92250,69399
chr19:51644866-51645101	chr19	+	51644884	51645134	True	NM_014385,NM_145232,NM_016543	chr19,chr19,chr19	+,-,+	SIGLEC7,CTU1,SIGLEC7	423,-33237,423
chr9:706771-706986	chr9	+	706844	707035	True	NM_152569,NM_153186	chr9,chr9	-,+	C9orf66,KANK1	-490951,1
chr19:52031642-52032157	chr19	+	52031717	52031910	True	NM_001177547,NM_198845,NM_198846,NM_001177549,NM_001177548,NM_007147,NM_001245	chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,+,-	SIGLEC6,SIGLEC6,SIGLEC6,SIGLEC6,SIGLEC6,ZNF175,SIGLEC6	3251,3251,3251,3251,3251,42620,3251
chr11:10561673-10562068	chr11	+	10561726	10562106	True	NM_016422,NR_034093,NR_034094	chr11,chr11,chr11	-,+,+	RNF141,LOC100129827,LOC100129827	718,723,680
chr6:150039807-150040096	chr6	+	150039806	150040108	True	NM_004690,NM_005389	chr6,chr6	-,+	LATS1,PCMT1	-414,30722
chr17:11918287-11919196	chr17	+	11918554	11919097	True	NM_144680,NM_003010	chr17,chr17	-,+	ZNF18,MAP2K4	-17865,5037
chr12:56761452-56762351	chr12	+	56762198	56762363	True	NM_198332,NM_005419,NM_016584,NM_001638	chr12,chr12,chr12,chr12	-,-,+,-	STAT2,STAT2,IL23A,APOF	-8161,-8161,-29591,-5615
chr22:20747290-20747552	chr22	+	20747303	20747601	True	NM_153334,NR_003253,NM_003426	chr22,chr22,chr22	-,+,+	SCARF2,ZNF74,ZNF74	44595,878,878
chr3:39506687-39508260	chr3	+	39506808	39508217	True	NM_001171174,NR_003090,NM_182935	chr3,chr3,chr3	-,+,+	CX3CR1,MOBP,MOBP	-183582,852,852
chr4:177714331-177715038	chr4	+	177714507	177715068	True	NM_021928,NM_005429	chr4,chr4	+,-	SPCS3,VEGFC	-473468,-612
chr6:36851757-36853706	chr6	+	36852074	36853675	True	NM_152734,NM_016059	chr6,chr6	+,-	C6orf89,PPIL1	-36,-9274
chr10:135339345-135340052	chr10	+	135339472	135340070	True	NM_000773,NM_001143763	chr10,chr10	+,-	CYP2E1,SYCE1	796,39118
chr17:38210937-38212702	chr17	+	38211118	38212461	True	NM_014815,NM_001079518,NM_199334,NM_001190919,NM_001190918,NM_003250	chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,+,+,+	MED24,MED24,THRA,THRA,THRA,THRA	-229,-229,6606,5984,6606,6606
chr15:73662000-73662256	chr15	+	73662063	73662305	True	NM_001042367,NM_005477	chr15,chr15	+,-	C15orf60,HCN4	73193,-458
chr1:210439909-210440590	chr1	+	210440189	210440579	True	NR_024337,NM_019605	chr1,chr1	-,+	C1orf133,SERTAD4	-32723,-34045
chr13:37007116-37007768	chr13	+	37007152	37007509	True	NM_001111046,NM_001142294,NM_003914,NM_001111047,NM_001111045	chr13,chr13,chr13,chr13,chr13	+,-,+,+,+	CCNA1,SPG20,CCNA1,CCNA1,CCNA1	-1236,-62835,-794,-1236,-794
chr7:131407471-131408696	chr7	+	131407577	131408664	True	NM_005397,NM_013255	chr7,chr7	-,+	PODXL,MKLN1	-166201,-395034
chr12:98911845-98912115	chr12	+	98911991	98912056	True	NM_001032284,NM_001032283,NR_027157,NM_003276	chr12,chr12,chr12,chr12	+,+,-,+	TMPO,TMPO,LOC100128191,TMPO	-2695,-2695,-1987,-2695
chr16:89639974-89640471	chr16	+	89639988	89640446	True	NM_013275,NM_153636,NM_014427	chr16,chr16,chr16	-,+,+	ANKRD11,CPNE7,CPNE7	-83019,1729,1729
chr7:100465617-100466239	chr7	+	100465658	100466126	True	NM_001015072,NM_003302,NM_001128853,NM_001128852,NM_015908,NM_001128854	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,+,+	UFSP1,TRIP6,SRRT,SRRT,SRRT,SRRT	21263,-759,6574,6574,6574,6574
chr8:104069786-104071754	chr8	+	104070160	104071723	True	NM_001695,NR_027071	chr8,chr8	+,-	ATP6V1C1,C8orf56	-36963,81897
chrX:107314786-107316488	chrX	+	107314915	107316505	True	NM_052936,NM_002814	chrX,chrX	+,-	ATG4A,PSMD10	18393,18419
chr22:34985693-34986992	chr22	+	34985725	34986842	True	NM_001008494,NM_133642	chr22,chr22	+,-	ISX,LARGE	475287,-669309
chr17:3375610-3375917	chr17	+	3375755	3375961	True	NM_001170696,NM_001170697,NM_001170695,NM_001170698,NM_001170699,NM_000049,NM_032598,NM_001128085	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,+,-,+	SPATA22,SPATA22,SPATA22,SPATA22,SPATA22,ASPA,SPATA22,ASPA	-613,-629,-613,-656,-688,3334,-714,1442
chr16:19299665-19300507	chr16	+	19299672	19300502	True	NR_024436,NM_016641	chr16,chr16	+,-	LOC728276,GDE1	-2624,232998
chr10:113943095-113943312	chr10	+	113943118	113943338	True	NM_058222,NM_020918	chr10,chr10	+,-	TECTB,GPAM	100154,237
chr13:30167415-30168822	chr13	+	30167478	30168773	True	NM_015233,NM_003045	chr13,chr13	+,-	MTUS2,SLC7A1	-164752,1104
chr4:110223585-110223929	chr4	+	110223615	110223871	True	NM_032518,NM_198721,NM_001042734	chr4,chr4,chr4	-,-,+	COL25A1,COL25A1,SEC24B	-22,-22,131099
chr3:42921808-42922161	chr3	+	42921807	42922191	True	NM_207404,NM_004391	chr3,chr3	+,-	ZNF662,CYP8B1	25210,-4174
chr19:45828773-45829452	chr19	+	45829037	45829500	True	NM_001824,NM_177417	chr19,chr19	-,+	CKM,KLC3	-2804,14497
chr6:149871247-149872587	chr6	+	149871727	149872459	True	NM_139126,NM_138785	chr6,chr6	-,+	PPIL4,C6orf72	-4556,15068
chr3:137480954-137481872	chr3	+	137481180	137481874	True	NM_001170538,NM_004189	chr3,chr3	-,+	DZIP1L,SOX14	350498,1259
chr2:106809521-106809973	chr2	+	106809583	106809869	True	NM_025076,NM_032411	chr2,chr2	-,+	UXS1,C2orf40	976,-127521
chr5:147712614-147714099	chr5	+	147712633	147714013	True	NM_001040433,NM_001040169	chr5,chr5	+,-	SPINK9,HTR4	1108,302662
chr19:14181629-14181925	chr19	+	14181639	14181943	True	NR_024282,NM_001145028	chr19,chr19	+,-	LOC113230,PALM3	1877,-11668
chr17:79652228-79653119	chr17	+	79652267	79652863	True	NM_001040025,NM_004712	chr17,chr17	-,+	ARL16,HGS	-1313,-1357
chr1:157515477-157515957	chr1	+	157515630	157515835	True	NM_001195388,NM_031281,NR_001560	chr1,chr1,chr1	-,-,+	FCRL5,FCRL5,CYCSP52	6530,6530,-417534
chr5:178017656-178017935	chr5	+	178017699	178017963	True	NM_173465,NM_058230	chr5,chr5	-,+	COL23A1,ZNF354B	-143,268990
chr1:148576837-148577662	chr1	+	148577377	148577441	True	NM_001164262,NM_001102663	chr1,chr1	-,+	PPIAL4F,NBPF16	-374841,-71
chr1:148576837-148577662	chr1	+	148739462	148739526	False	NM_001164262,NM_001102663	chr1,chr1	-,+	PPIAL4F,NBPF16	-536926,-71
chr21:37834633-37835442	chr21	+	37834744	37835475	True	NM_012130,NM_005441	chr21,chr21	-,+	CLDN14,CHAF1B	3300,-77106
chr1:154298886-154300673	chr1	+	154299211	154300719	True	NM_020452,NM_080429,NM_138740,NM_001005855	chr1,chr1,chr1,chr1	+,+,-,+	ATP8B2,AQP10,C1orf43,ATP8B2	18,-5670,-105938,-1226
chr22:34984659-34985110	chr22	+	34984949	34985155	True	NM_001008494,NM_133642	chr22,chr22	+,-	ISX,LARGE	476974,-668533
chr20:53091940-53092151	chr20	+	53092008	53092186	True	NM_018431,NM_001128915	chr20,chr20	+,-	DOK5,CYP24A1	79,-301492
chr5:140537882-140539534	chr5	+	140537935	140539250	True	NM_018939,NM_031947,NR_001280	chr5,chr5,chr5	+,-,+	PCDHB6,SLC25A2,PCDHB17	-8155,144417,-2414
chr1:70878008-70879037	chr1	+	70878299	70878876	True	NM_001190463,NM_153742,NM_030816,NM_001902	chr1,chr1,chr1,chr1	+,+,-,+	CTH,CTH,ANKRD13C,CTH	-1458,-1458,-57882,-1458
chr3:11295422-11296083	chr3	+	11295429	11296099	True	NM_000861,NM_001128221	chr3,chr3	+,-	HRH1,VGLL4	-1095,314349
chr8:53326622-53327403	chr8	+	53326710	53327390	True	NM_014682,NM_005285	chr8,chr8	-,+	ST18,NPBWR1	-4271,525077
chr11:63992296-63992670	chr11	+	63992333	63992709	True	NM_031472,NM_001160389,NM_001033678,NM_032344,NM_005528,NM_003377,NM_001160392,NM_001160393,NM_001160390,NM_001128613,NM_001128612	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,+,+,+,-,-,-,+,+	TRPT1,TRPT1,TRPT1,NUDT22,DNAJC4,VEGFB,TRPT1,TRPT1,TRPT1,NUDT22,NUDT22	1067,1067,1067,1028,5043,9556,1067,682,1067,1028,1028
chr6:35525230-35526002	chr6	+	35525260	35525882	True	NM_003322,NM_007104	chr6,chr6	-,+	TULP1,RPL10A	-44613,-89133
chr18:3248189-3248812	chr18	+	3248198	3248831	True	NM_019856,NM_006471	chr18,chr18	-,+	MYOM1,MYL12A	-28092,-723
chr3:182881627-182881908	chr3	+	182881644	182881714	True	NM_032047,NM_014398	chr3,chr3	+,-	B3GNT5,LAMP3	89317,-977
chr2:74004719-74005752	chr2	+	74004749	74005796	True	NM_001080474,NM_003584	chr2,chr2	+,-	C2orf78,DUSP11	5519,1539
chr1:150566100-150566374	chr1	+	150566155	150566382	True	NM_182763,NR_036211	chr1,chr1	-,+	MCL1,MIR4257	-13941,-41808
chr19:45844241-45845265	chr19	+	45844625	45845105	True	NM_177417,NM_001824	chr19,chr19	+,-	KLC3,CKM	-678,-18392
chr11:76473257-76473888	chr11	+	76473263	76473888	True	NM_015516,NR_024042	chr11,chr11	+,-	TSKU,GUCY2E	20396,-40430
chr11:64085187-64085530	chr11	+	64085244	64085450	True	NM_181652,NM_012094,NM_016404,NM_181651	chr11,chr11,chr11,chr11	+,+,-,+	PRDX5,PRDX5,TRMT112,PRDX5	118,118,-211,118
chr17:72889196-72889470	chr17	+	72889364	72889430	True	NM_178128,NM_178160	chr17,chr17	-,+	FADS6,OTOP2	325,30939
chr5:140069756-140070657	chr5	+	140070120	140070642	True	NM_012208,NM_002109,NM_144723	chr5,chr5,chr5	+,-,+	HARS2,HARS,ZMAT2	375,379,9389
chr14:81433166-81433719	chr14	+	81433197	81433469	True	NM_152446,NM_000369	chr14,chr14	-,+	C14orf145,TSHR	-27313,-11381
chr19:1511929-1512169	chr19	+	1512008	1512146	True	NR_026557,NM_213604	chr19,chr19	+,-	PLK5P,ADAMTSL5	11931,1092
chr6:132701184-132701936	chr6	+	132701299	132701979	True	NM_015529,NM_175057	chr6,chr6	-,+	MOXD1,TAAR9	20743,157447
chr14:20758266-20759253	chr14	+	20758271	20759063	True	NM_001004479,NM_138376	chr14,chr14	+,-	OR11H4,TTC5	-47378,15141
chr5:131746947-131747350	chr5	+	131746954	131747258	True	NM_001013717,NR_037898	chr5,chr5	+,-	C5orf56,LOC553103	-332,-41346
chr19:23732724-23734354	chr19	+	23732786	23734382	True	NM_138330,NR_003662	chr19,chr19	-,+	ZNF675,RPSAP58	135685,211433
chr21:34850935-34851142	chr21	+	34850956	34851182	True	NM_032195,NM_006134	chr21,chr21	+,-	SON,TMEM50B	64167,1149
chr11:89301374-89302891	chr11	+	89301541	89302747	True	NM_153696,NM_001143837	chr11,chr11	+,-	FOLH1B,NOX4	89717,20092
chr11:89301374-89302891	chr11	-	49293468	49293525	False	NR_027044,NM_004476	chr11,chr11	+,-	LOC440040,FOLH1	286554,-63246
chr16:15600191-15600876	chr16	+	15600392	15600896	True	NM_001184998,NM_001142469	chr16,chr16	-,+	KIAA0430,C16orf45	136177,-4330
chr10:22726222-22726440	chr10	+	22726234	22726486	True	NM_172242,NR_036533	chr10,chr10	+,-	SPAG6,LOC100499489	-91886,422
chr5:140782365-140782686	chr5	+	140782415	140782683	True	NM_018925,NM_018926,NM_018921,NM_032099,NM_032089,NM_032100,NM_005642	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,-	PCDHGB5,PCDHGB6,PCDHGA9,PCDHGB5,PCDHGA9,PCDHGB6,TAF7	-4778,5086,18,-4778,18,5086,-82064
chr21:42520007-42520258	chr21	+	42520007	42520127	True	NR_024100,NR_036167	chr21,chr21	-,+	C21orf130,MIR3197	-16,19356
chr10:45456549-45457405	chr10	+	45456598	45457300	True	NR_033842,NM_032023	chr10,chr10	-,+	LOC220980,RASSF4	-1461,-1443
chr15:52262604-52263305	chr15	+	52262603	52263340	True	NM_138792,NM_002748	chr15,chr15	-,+	LEO1,MAPK6	668,48070
chr19:41428519-41429431	chr19	+	41428535	41429263	True	NM_030589,NR_001278	chr19,chr19	-,+	CYP2A7,CYP2B7P1	-39878,906
chr20:44993314-44995055	chr20	+	44993400	44994984	True	NM_152854,NM_173073,NM_015945,NM_173179	chr20,chr20,chr20,chr20	+,-,-,-	CD40,SLC35C2,SLC35C2,SLC35C2	-246545,-336,-336,-336
chr3:125777015-125777578	chr3	+	125777019	125777499	True	NM_001008487,NM_001012337	chr3,chr3	-,+	SLC41A3,ROPN1B	-1401,-89044
chr1:11997675-11998301	chr1	+	11997683	11998350	True	NM_000302,NM_138346	chr1,chr1	+,-	PLOD1,KIAA2013	-3010,-11198
chrX:63450341-63451006	chrX	+	63450466	63450614	True	NM_001010888,NM_130388	chrX,chrX	+,-	ZC3H12B,ASB12	1258000,33
chr17:21529147-21530237	chr17	+	21529427	21530067	True	NM_001113434,NM_001194958	chr17,chr17	-,+	C17orf51,KCNJ18	-74486,-221045
chr19:51961437-51961808	chr19	+	51961437	51961799	True	NM_001080405,NM_014442	chr19,chr19	+,-	CEACAM18,SIGLEC8	18038,31
chr9:108320840-108321307	chr9	+	108320957	108321273	True	NM_001198963,NM_006731,NM_001079802,NM_005502	chr9,chr9,chr9,chr9	+,+,+,-	FKTN,FKTN,FKTN,ABCA1	-607,-607,-607,-630430
chr21:41122317-41122898	chr21	+	41122449	41122719	True	NR_026543,NM_001080444	chr21,chr21	-,+	C21orf88,IGSF5	-137700,-5166
chr18:29599771-29600169	chr18	+	29599796	29599970	True	NM_014939,NM_017831	chr18,chr18	-,+	TRAPPC8,RNF125	-76705,-1405
chrX:153060817-153061419	chrX	+	153060860	153061382	True	NM_001204526,NM_001204527,NM_174869,NR_037927,NM_004135,NM_006280	chrX,chrX,chrX,chrX,chrX,chrX	+,+,-,+,-,+	SSR4,SSR4,IDH3G,SSR4,IDH3G,SSR4	-1007,-1281,-893,-1007,-893,-892
chr2:23637133-23637618	chr2	+	23637242	23637656	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	512328,-28995
chr19:1942174-1942388	chr19	+	1942328	1942436	True	NR_033400,NM_001319	chr19,chr19	-,+	C19orf34,CSNK1G2	12162,-1218
chr22:25158758-25159202	chr22	+	25158762	25159110	True	NM_001008496,NR_001283	chr22,chr22	-,+	PIWIL3,TOP1P2	11629,1357
chr6:11380957-11381172	chr6	+	11380963	11381041	True	NM_001142393,NM_001100829	chr6,chr6	-,+	NEDD9,TMEM170B	1592,157469
chr2:198380240-198380579	chr2	+	198380274	198380480	True	NM_199482,NM_015387,NM_001100819,NM_199440,NM_001204094	chr2,chr2,chr2,chr2,chr2	+,+,+,-,+	MOBKL3,MOBKL3,MOBKL3,HSPD1,MOBKL3	-30,286,286,-15276,541
chr16:67920015-67920993	chr16	+	67920018	67920945	True	NM_006742,NM_025082,NM_198443	chr16,chr16,chr16	+,-,+	PSKH1,CENPT,NRN1L	6229,-38657,-1288
chr5:157062486-157063468	chr5	+	157062861	157063334	True	NM_001145132,NM_007017	chr5,chr5	+,-	C5orf52,SOX30	35226,16149
chr2:198364204-198364473	chr2	+	198364213	198364449	True	NM_002157,NM_002156,NM_001202485,NM_199440	chr2,chr2,chr2,chr2	+,-,+,-	HSPE1,HSPD1,HSPE1-MOBKL3,HSPD1	271,241,271,599
chr15:40887411-40888067	chr15	+	40887505	40888110	True	NM_144508,NM_052849,NM_170589	chr15,chr15,chr15	+,-,+	CASC5,C15orf57,CASC5	-1110,-30253,-1110
chr19:4181503-4182153	chr19	+	4181841	4182201	True	NM_016539,NM_133475,NM_001193285	chr19,chr19,chr19	-,+,-	SIRT6,ANKRD24,SIRT6	445,1149,445
chr3:148443567-148445167	chr3	+	148443597	148445197	True	NM_003071,NM_032049	chr3,chr3	-,+	HLTF,AGTR1	359194,2769
chr19:12272505-12273160	chr19	+	12272591	12273085	True	NM_003437,NR_037801,NR_037802,NM_145233	chr19,chr19,chr19,chr19	+,-,-,-	ZNF136,ZNF625,ZNF625-ZNF20,ZNF625	786,-5045,-5045,-5045
chr8:124664237-124664533	chr8	+	124664283	124664557	True	NM_001081675,NM_144963	chr8,chr8	-,+	KLHL38,FAM91A1	683,116324
chr11:65791794-65792831	chr11	+	65792064	65792770	True	NM_001323,NM_053054	chr11,chr11	+,-	CST6,CATSPER1	-12653,1268
chr17:74378847-74379129	chr17	+	74378923	74378983	True	NM_021972,NM_182965,NM_002766,NM_001142601,NM_001142602	chr17,chr17,chr17,chr17,chr17	+,+,-,+,+	SPHK1,SPHK1,PRPSAP1,SPHK1,SPHK1	1706,1706,-28693,1706,2305
chr7:45070481-45070903	chr7	+	45070596	45070714	True	NR_003697,NM_001029835	chr7,chr7	-,+	C7orf40,CCM2	-44337,-3419
chr17:1300486-1300986	chr17	+	1300500	1301014	True	NM_006761,NR_024058,NM_172367	chr17,chr17,chr17	-,-,+	YWHAE,YWHAE,TUSC5	2594,2594,-117603
chr22:30233607-30233922	chr22	+	30233626	30233776	True	NM_021090,NM_032204	chr22,chr22	+,-	MTMR3,ASCC2	45381,528
chr14:59659250-59659491	chr14	+	59659249	59659492	True	NM_014992,NM_022571	chr14,chr14	+,-	DAAM1,GPR135	-3901,272618
chr19:14231238-14231444	chr19	+	14231246	14231446	True	NR_024282,NM_207518,NM_002730	chr19,chr19,chr19	+,-,-	LOC113230,PRKACA,PRKACA	-47476,-6254,-2687
chr1:145827036-145827557	chr1	+	145827191	145827555	True	NM_001097612,NM_001097613,NM_001097616,NR_036541	chr1,chr1,chr1,chr1	-,-,+,-	GPR89A,GPR89A,GPR89C,GPR89A	-88,-88,56312,-88
chr1:145827036-145827557	chr1	-	147400023	147400387	False	NR_003377,NM_016334	chr1,chr1	-,+	PDZK1P1,GPR89B	83994,118
chr15:30489085-30489670	chr15	+	30489482	30489710	True	NR_026771,NM_139320	chr15,chr15	+,-	DKFZP434L187,CHRFAM7A	-1294,196204
chr15:30489085-30489670	chr15	-	32633390	32633618	False	NR_026859,NM_199357	chr15,chr15	-,+	FAM7A3,ARHGAP11A	93497,274072
chr20:25676779-25677012	chr20	+	25676891	25676963	True	NM_021067,NM_015655	chr20,chr20	+,-	GINS1,ZNF337	-288619,556
chr1:222717576-222719309	chr1	+	222717660	222719002	True	NM_024746,NM_198551	chr1,chr1	-,+	HHIPL2,MIA3	2492,72441
chr17:74706318-74706638	chr17	+	74706337	74706575	True	NM_001008528,NM_001008529,NM_001080510,NM_198530	chr17,chr17,chr17,chr17	-,-,+,-	MXRA7,MXRA7,METTL23,MXRA7	531,531,16374,531
chr7:129268043-129269210	chr7	+	129268130	129269042	True	NM_001040110,NR_029614	chr7,chr7	+,-	NRF1,MIR182	876,141342
chr9:128471493-128473256	chr9	+	128472186	128473054	True	NM_001006621,NM_001006619,NM_024117,NM_001006620,NM_006195,NM_001006617,NM_001006618	chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,-,-,-,+,-,-	MAPKAP1,MAPKAP1,MAPKAP1,MAPKAP1,PBX3,MAPKAP1,MAPKAP1	-2673,-2673,-2673,-2673,36562,-2673,-2673
chr7:150269313-150269619	chr7	+	150269314	150269668	True	NM_024711,NM_018326	chr7,chr7	-,+	GIMAP6,GIMAP4	60062,-4908
chr17:8213197-8213745	chr17	+	8213505	8213773	True	NM_025014,NM_201520,NM_173728	chr17,chr17,chr17	+,-,+	ARHGEF15,SLC25A35,ARHGEF15	366,-15335,0
chr4:41625700-41626438	chr4	+	41625759	41626475	True	NM_001112720,NM_003924	chr4,chr4	+,-	LIMCH1,PHOX2B	-10892,124562
chr17:61997642-61998073	chr17	+	61997970	61998037	True	NM_001318,NM_022579,NM_022581,NM_000515,NM_022560,NM_022561,NM_022562,NM_022580,NR_002947,NM_022559	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,-,-,-,+,-	CSHL1,CSHL1,CSHL1,GH1,GH1,GH1,GH1,CSHL1,TCAM1P,GH1	-9352,-9352,-9352,-1772,-1772,-1772,-1772,-9352,-63656,-1772
chr7:15562283-15564207	chr7	+	15563503	15564212	True	NM_001195280,NM_001004320	chr7,chr7	+,-	LOC100506049,AGMO	1002292,37480
chr21:45607302-45608398	chr21	+	45607500	45608314	True	NM_198155,NM_015259	chr21,chr21	+,-	C21orf33,ICOSLG	-54064,52570
chr17:1361963-1362875	chr17	+	1362540	1362759	True	NM_005206,NM_016823,NR_028514	chr17,chr17,chr17	-,-,+	CRK,CRK,LOC100306951	-2996,-2996,57453
chr9:130912753-130913012	chr9	+	130912755	130913003	True	NR_027812,NM_024112,NM_005564	chr9,chr9,chr9	-,+,+	PTGES2,C9orf16,LCN2	-22043,9535,-1082
chr5:1553102-1553348	chr5	+	1553150	1553394	True	NM_024830,NM_004553	chr5,chr5	-,+	LPCAT1,NDUFS6	-29074,248101
chr22:42978195-42978828	chr22	+	42978218	42978408	True	NR_002184,NM_014509	chr22,chr22	-,+	RRP7B,SERHL2	-201,-28344
chr22:42978195-42978828	chr22	+	42916003	42916053	False	NR_027786,NM_015703	chr22,chr22	+,-	SERHL,RRP7A	-19469,-174
chr3:121798657-121799268	chr3	+	121798667	121799257	True	NM_006889,NM_001199799	chr3,chr3	+,-	CD86,ILDR1	-1968,-57540
chr15:91496478-91496750	chr15	+	91496483	91496725	True	NM_033544,NM_001017919,NM_198527	chr15,chr15,chr15	+,+,-	RCCD1,RCCD1,HDDC3	1380,1380,-20709
chr18:29301135-29302674	chr18	+	29301443	29302715	True	NM_004775,NM_000371	chr18,chr18	-,+	B4GALT6,TTR	-36757,-129764
chr14:103987088-103987385	chr14	+	103987238	103987308	True	NM_152307,NM_001823	chr14,chr14	+,-	TRMT61A,CKB	8200,1912
chrX:48956291-48956573	chrX	+	48956291	48956395	True	NM_001163323,NM_007075	chrX,chrX	+,-	CCDC120,WDR45	-39819,1720
chr12:75792031-75793944	chr12	+	75792263	75793848	True	NM_152436,NM_032606	chr12,chr12	+,-	GLIPR1L2,CAPS2	-7432,-68427
chr1:12125298-12126196	chr1	+	12125514	12126128	True	NM_001243,NM_138346	chr1,chr1	+,-	TNFRSF8,KIAA2013	-2131,-139029
chr17:66551760-66553660	chr17	+	66551849	66553668	True	NR_027751,NM_212472	chr17,chr17	-,+	FAM20A,PRKAR1A	950,-43357
chr19:7542309-7542525	chr19	+	7542499	7542571	True	NR_024491,NM_198534	chr19,chr19	-,+	LOC100128573,C19orf45	-4252,19873
chr16:578979-579366	chr16	+	579086	579366	True	NM_005632,NR_024121	chr16,chr16	+,-	SOLH,NCRNA00235	-1281,-1679
chr1:187414287-187415564	chr1	+	187414450	187415399	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-764891,-616480
chr2:238324601-238325544	chr2	+	238324624	238325540	True	NM_001042467,NM_057164,NM_057165,NM_057166,NM_057167,NM_004369	chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-	MLPH,COL6A3,COL6A3,COL6A3,COL6A3,COL6A3	70337,-1774,-1774,-1774,-1774,-1774
chr16:223340-223667	chr16	+	223576	223706	True	NM_001077350,NM_000558,NM_000517,NM_001003938,NM_005331	chr16,chr16,chr16,chr16,chr16	-,+,+,+,+	NPRL3,HBA1,HBA2,HBM,HBQ1	-34904,2972,-781,-7654,6626
chr17:26128585-26129048	chr17	+	26128585	26129027	True	NM_000625,NR_024043	chr17,chr17	-,+	NOS2,LGALS9	-1030,-170472
chr19:54310388-54310807	chr19	+	54310631	54310771	True	NM_033297,NR_029866	chr19,chr19	-,+	NLRP12,MIR373	1238,-18723
chr7:6416223-6417265	chr7	+	6416480	6416954	True	NM_006908,NM_018890,NM_001037163	chr7,chr7,chr7	+,+,-	RAC1,RAC1,C7orf70	-2414,-2414,-27890
chr19:15576648-15577927	chr19	+	15577416	15577956	True	NM_022904,NR_031716	chr19,chr19	-,+	RASAL3,MIR1470	-2034,-17108
chr5:177423738-177423997	chr5	+	177423738	177424018	True	NM_006261,NM_001079527	chr5,chr5	-,+	PROP1,FAM153C	-495,11670
chr5:55006121-55007850	chr5	+	55006317	55007794	True	NM_173514,NM_001166533	chr5,chr5	-,+	SLC38A9,DDX4	419,26050
chr16:15984163-15984707	chr16	+	15984503	15984715	True	NM_144600,NM_004996	chr16,chr16	-,+	FOPNL,ABCC1	-2056,58718
chr7:16846433-16846860	chr7	+	16846490	16846908	True	NM_006408,NM_014399	chr7,chr7	-,+	AGR2,TSPAN13	-1752,-53197
chr16:86381345-86381927	chr16	+	86381482	86381900	True	NR_024406,NM_001451	chr16,chr16	-,+	LOC732275,FOXF1	-2197,162232
chr13:113239793-113240475	chr13	+	113240101	113240190	True	NM_207440,NM_006322	chr13,chr13	+,-	C13orf35,TUBGCP3	61167,2348
chr7:116779556-116781071	chr7	+	116779642	116781102	True	NR_002332,NR_002331	chr7,chr7	+,-	ST7OT3,ST7OT2	41632,4562
chr1:22264714-22265475	chr1	+	22264905	22265405	True	NM_005529,NM_007352	chr1,chr1	-,+	HSPG2,CELA3B	-1155,38012
chr9:97088194-97088752	chr9	+	97088312	97088758	True	NM_017561,NR_033937	chr9,chr9	-,+	FAM22F,LOC100132077	2218,5999
chr9:97088194-97088752	chr9	-	99693461	99693907	False	NM_001170741,NM_001045477,NM_001001662	chr9,chr9,chr9	+,+,-	FAM22G,FAM22G,ZNF782	-2226,-2226,-77072
chr9:2623060-2623452	chr9	+	2623061	2623441	True	NR_015375,NM_003383,NM_001018056	chr9,chr9,chr9	-,+,+	FLJ35024,VLDLR,VLDLR	-688,-1319,-1319
chr12:132436985-132437339	chr12	+	132437304	132437380	True	NM_015409,NM_175066	chr12,chr12	+,-	EP400,DDX51	-2847,191550
chr5:175304050-175304868	chr5	+	175304050	175304906	True	NM_032361,NM_001008220	chr5,chr5	-,+	THOC3,CPLX2	90689,-5602
chr19:48752174-48752839	chr19	+	48752482	48752880	True	NM_001184904,NM_001184901,NM_001184900,NM_001184903,NM_001184902,NM_014959,NR_033680,NR_033678,NR_033679,NM_153608	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,-,-,+	CARD8,CARD8,CARD8,CARD8,CARD8,CARD8,CARD8,CARD8,CARD8,ZNF114	6373,274,-8162,274,6373,274,60,60,-8162,21773
chr12:54422758-54423426	chr12	+	54423120	54423438	True	NM_004503,NM_018953,NR_030753,NR_026658	chr12,chr12,chr12,chr12	+,+,+,-	HOXC6,HOXC5,MIR615,LOC100240735	-984,3393,4295,52219
chr5:135503804-135504929	chr5	+	135503849	135504295	True	NR_024418,NM_001001419	chr5,chr5	-,+	LOC389332,SMAD5	24613,-35364
chr2:38190269-38190997	chr2	+	38190345	38190437	True	NM_000104,NM_144713	chr2,chr2	-,+	CYP1B1,FAM82A1	112944,-12805
chr6:37139627-37140086	chr6	+	37139677	37140020	True	NM_145316,NM_002648	chr6,chr6	-,+	TMEM217,PIM1	85446,-1811
chr20:60721834-60722644	chr20	+	60721996	60722666	True	NM_198935,NM_002792	chr20,chr20	+,-	SS18L1,PSMA7	-3226,-3522
chr1:16402009-16403130	chr1	+	16402130	16403002	True	NM_182623,NM_001165945	chr1,chr1	-,+	FAM131C,CLCNKB	-2003,-26897
chr22:24578311-24578992	chr22	+	24578468	24578914	True	NM_001099781,NM_019601	chr22,chr22	-,+	GGT5,SUSD2	62246,-1075
chr19:36236579-36236814	chr19	+	36236614	36236790	True	NM_019104,NM_144987,NM_172341,NM_001040425,NM_024660	chr19,chr19,chr19,chr19,chr19	+,-,+,-,-	LIN37,U2AF1L4,PSENEN,U2AF1L4,IGFLR1	2721,-278,-172,-278,-3263
chr8:110707728-110708021	chr8	+	110707943	110708031	True	NM_001099744,NM_004215,NM_001099743	chr8,chr8,chr8	-,+,-	SYBU,EBAG9,SYBU	-3923,-155693,-3923
chr6:169654144-169654661	chr6	+	169654217	169654671	True	NM_001029863,NM_003247	chr6,chr6	+,-	C6orf120,THBS2	447585,-80
chr5:178979539-178980347	chr5	+	178979544	178980316	True	NM_005520,NM_025158,NM_001040451,NM_001040452	chr5,chr5,chr5,chr5	-,+,+,+	HNRNPH1,RUFY1,RUFY1,RUFY1	70456,-2024,6415,6415
chr1:150337943-150338156	chr1	+	150337978	150338073	True	NM_016022,NM_015203	chr1,chr1	-,+	APH1A,RPRD2	-96446,-1049
chr6:157738975-157739923	chr6	+	157739531	157739961	True	NM_018452,NM_024630	chr6,chr6	-,+	C6orf35,ZDHHC14	5342,62595
chr14:34417062-34417303	chr14	+	34417274	34417348	True	NR_002937,NM_022073	chr14,chr14	+,-	C14orf19,EGLN3	991779,2986
chr8:110346064-110346550	chr8	+	110346083	110346440	True	NM_001193557,NR_036472,NM_020189,NR_036471,NM_001128211,NM_032869	chr8,chr8,chr8,chr8,chr8,chr8	+,+,+,+,-,-	ENY2,ENY2,ENY2,ENY2,NUDCD1,NUDCD1	111,111,111,111,-3921,-21
chrX:70154250-70156033	chrX	+	70154443	70155366	True	NM_001048164,NM_032803,NM_001170931	chrX,chrX,chrX	-,-,+	SLC7A3,SLC7A3,FOXO4	-3468,-3468,160632
chr2:28111287-28112815	chr2	+	28111313	28112789	True	NM_004899,NM_199191,NM_199192,NM_199193,NM_199194,NM_022128,NR_028308	chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,+,-,-	BRE,BRE,BRE,BRE,BRE,RBKS,LOC100302650	767,767,767,692,692,484,1242
chr14:64192249-64194027	chr14	+	64192380	64193871	True	NM_030791,NM_015180	chr14,chr14	-,+	SGPP1,SYNE2	936,125811
chr2:136288251-136288969	chr2	+	136288301	136288857	True	NM_015361,NM_032143	chr2,chr2	+,-	R3HDM1,ZRANB3	225,-1
chr2:39349629-39349978	chr2	+	39349758	39350020	True	NM_005633,NM_001145451	chr2,chr2	-,+	SOS1,ARHGEF33	-2154,-203311
chr5:35988624-35990116	chr5	+	35988625	35989617	True	NM_002185,NM_152404	chr5,chr5	+,-	IL7R,UGT3A1	-131685,1970
chr7:76055791-76056134	chr7	+	76055807	76055947	True	NM_080744,NM_001110354	chr7,chr7	-,+	SRCRB4D,ZP3	-16795,-1586
chr14:24540368-24540621	chr14	+	24540376	24540552	True	NM_006032,NM_006177	chr14,chr14	+,-	CPNE6,NRL	203,13330
chr4:144434520-144434779	chr4	+	144434590	144434676	True	NM_001168235,NM_003601	chr4,chr4	-,+	FREM3,SMARCA5	187202,-25
chr11:134095650-134096173	chr11	+	134095728	134096024	True	NM_015261,NM_052875	chr11,chr11	-,+	NCAPD3,VPS26B	-1302,-1219
chr3:119219308-119219691	chr3	+	119219319	119219731	True	NM_016589,NM_018266	chr3,chr3	+,-	C3orf1,TMEM39A	-2009,-36848
chr22:18121079-18121287	chr22	+	18121114	18121248	True	NM_001696,NM_001039366,NM_001039367,NM_015367	chr22,chr22,chr22,chr22	-,-,-,+	ATP6V1E1,ATP6V1E1,ATP6V1E1,BCL2L13	-9526,-9526,-9526,236
chr3:57743324-57743966	chr3	+	57743396	57743943	True	NM_007159,NM_152678	chr3,chr3	+,-	SLMAP,FAM116A	-273,-64580
chr3:150263212-150263419	chr3	+	150263226	150263442	True	NM_014445,NM_032025	chr3,chr3	-,+	SERP1,EIF2A	1036,1131
chr3:15466950-15467538	chr3	+	15466950	15467450	True	NM_033083,NM_152396	chr3,chr3	+,-	EAF1,METTL6	1613,1642
chr11:130655961-130657420	chr11	+	130656055	130657339	True	NM_139055,NM_014758	chr11,chr11	+,-	ADAMTS15,SNX19	-337237,129094
chr2:26783539-26784359	chr2	+	26783850	26784324	True	NM_001105519,NM_194248	chr2,chr2	+,-	C2orf70,OTOF	1156,-2284
chr9:133568182-133568637	chr9	+	133568200	133568635	True	NM_014285,NR_027440	chr9,chr9	+,-	EXOSC2,LOC100272217	522,-113319
chr4:164252281-164253008	chr4	+	164252499	164252983	True	NM_006174,NM_000909	chr4,chr4	+,-	NPY5R,NPY1R	12107,1014
chr19:14887963-14889351	chr19	+	14888043	14889400	True	NM_152917,NM_152916,NM_152919,NM_152918,NM_032433,NM_013447,NM_152920,NM_152921	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,+,-,-,-	EMR2,EMR2,EMR2,EMR2,ZNF333,EMR2,EMR2,EMR2	3,3,3,3,-87224,3,3,3
chr19:14887963-14889351	chr19	-	14491396	14491446	False	NM_078481,NM_001025160,NM_001204057,NM_001784	chr19,chr19,chr19,chr19	+,+,-,+	CD97,CD97,DDX39A,CD97	766,766,38510,766
chrX:15682980-15684442	chrX	+	15682998	15684050	True	NM_020665,NR_026551	chrX,chrX	-,+	TMEM27,CA5BP1	-44,8988
chrX:15383413-15384219	chrX	+	15383549	15384018	True	NM_004469,NM_203281	chrX,chrX	-,+	FIGF,BMX	18574,134881
chr22:24059564-24060570	chr22	+	24059567	24060592	True	NR_024448,NM_153615	chr22,chr22	-,+	LOC91316,RGL4	43,-26570
chr12:53491411-53491816	chr12	+	53491541	53491811	True	NM_002178,NM_003578,NM_032840	chr12,chr12,chr12	+,+,-	IGFBP6,SOAT2,SPRYD3	-156,5462,-18337
chr12:6988990-6989428	chr12	+	6989290	6989365	True	NM_032641,NR_033796,NM_001146316,NR_002803	chr12,chr12,chr12,chr12	-,+,-,+	SPSB2,DSTNP2,SPSB2,RPL13P5	-6769,4480,-6841,3779
chr9:139888103-139888568	chr9	+	139888214	139888606	True	NM_183241,NM_004669	chr9,chr9	+,-	C9orf142,CLIC3	-1395,2468
chr1:50489825-50490704	chr1	+	50489933	50490737	True	NM_032785,NM_001144777	chr1,chr1	-,+	AGBL4,ELAVL4	-307,22948
chr4:6384974-6385799	chr4	+	6385029	6385714	True	NM_006005,NM_181876	chr4,chr4	+,-	WFS1,PPP2R2C	-113503,-1432
chr1:175162551-175163301	chr1	+	175162736	175163327	True	NM_001162893,NM_022093,NM_014656,NM_001162895,NM_001162894	chr1,chr1,chr1,chr1,chr1	-,+,-,-,-	KIAA0040,TNN,KIAA0040,KIAA0040,KIAA0040	-507,-125793,-787,-787,-507
chr1:246561440-246562857	chr1	+	246561446	246562267	True	NM_001139459,NM_022743	chr1,chr1	+,-	CNST,SMYD3	167371,18506
chr13:25746585-25747386	chr13	+	25746846	25747425	True	NM_199138,NM_152704,NM_030979	chr13,chr13,chr13	-,-,+	FAM123A,FAM123A,PABPC3	-989,-989,-76636
chr18:76737280-76737507	chr18	+	76737292	76737538	True	NM_001146343,NM_171999	chr18,chr18	-,+	PQLC1,SALL3	974165,2736
chr5:179112072-179113392	chr5	+	179112968	179113106	True	NM_001024649,NM_001164444	chr5,chr5	+,-	CANX,CBY3	12823,-4993
chr15:85522143-85522405	chr15	+	85522182	85522385	True	NM_173454,NM_014300,NM_002605	chr15,chr15,chr15	+,-,+	PDE8A,SEC11A,PDE8A	2819,-262508,2819
chr16:21711162-21711937	chr16	+	21711354	21711745	True	NM_170664,NM_005849	chr16,chr16	+,-	OTOA,IGSF6	4538,-47382
chr2:62117830-62118590	chr2	+	62117979	62118349	True	NM_006430,NM_152516	chr2,chr2	-,+	CCT4,COMMD1	-2188,14453
chr4:168095649-168096848	chr4	+	168095702	168096862	True	NM_001204353,NM_007193	chr4,chr4	-,+	SPOCK3,ANXA10	58765,916825
chr8:54756106-54756538	chr8	+	54756109	54756512	True	NM_015941,NM_170587,NM_213619,NM_213620	chr8,chr8,chr8,chr8	-,+,-,-	ATP6V1H,RGS20,ATP6V1H,ATP6V1H	-259,7855,-259,-562
chr2:206548222-206549977	chr2	+	206548485	206549568	True	NM_201266,NM_201267,NM_201264,NM_201279,NM_003872,NM_018534,NM_017759	chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,+,+,-	NRP2,NRP2,NRP2,NRP2,NRP2,NRP2,INO80D	-1312,-1312,-1312,-1312,-1312,-1312,401396
chr1:41327951-41328193	chr1	+	41327993	41328071	True	NM_172163,NM_133467	chr1,chr1	+,-	KCNQ4,CITED4	-78360,1
chr9:26889572-26890663	chr9	+	26889888	26890673	True	NM_024828,NM_001099223,NM_001167575	chr9,chr9,chr9	-,+,-	C9orf82,IFT74,C9orf82	2208,56363,2208
chr5:41159173-41161086	chr5	+	41159259	41161092	True	NM_000587,NM_000065	chr5,chr5	+,-	C7,C6	-249711,52626
chr6:35228945-35230673	chr6	+	35229046	35230551	True	NM_018679,NM_003427	chr6,chr6	-,+	TCP11,ZNF76	-119859,-1587
chr18:43753500-43753766	chr18	+	43753508	43753762	True	NM_001008239,NM_145055,NM_001001937	chr18,chr18,chr18	+,+,-	C18orf25,C18orf25,ATP5A1	225,225,-69309
chr19:24272071-24273841	chr19	+	24272275	24273195	True	NM_203282,NR_003603	chr19,chr19	+,-	ZNF254,LOC100101266	-2351,73105
chr12:111021294-111023194	chr12	+	111021365	111023218	True	NM_139283,NM_001082537	chr12,chr12	-,+	PPTC7,TCTN1	-301,28613
chr15:37004109-37004557	chr15	+	37004150	37004327	True	NR_027320,NM_032499	chr15,chr15	-,+	CSNK1A1P1,C15orf41	106431,-71395
chr5:128309783-128311011	chr5	+	128309788	128310717	True	NM_014031,NM_001999,NM_001017372	chr5,chr5,chr5	+,-,+	SLC27A6,FBN2,SLC27A6	-8637,-436053,-8634
chr7:6147669-6148202	chr7	+	6148019	6148101	True	NM_032172,NM_014413	chr7,chr7	+,-	USP42,EIF2AK1	-3526,-49159
chr12:64241448-64242085	chr12	+	64241539	64242133	True	NM_020762,NM_173812	chr12,chr12	+,-	SRGAP1,DPY19L2	-3060,-179185
chr18:47340587-47340810	chr18	+	47340717	47340807	True	NR_003003,NM_006111	chr18,chr18	+,-	SCARNA17,ACAA2	-375,-466
chr4:110627918-110628633	chr4	+	110628078	110628548	True	NM_018983,NM_001226,NM_032992	chr4,chr4,chr4	+,-,-	GAR1,CASP6,CASP6	108117,-3449,-3449
chr16:11871797-11872692	chr16	+	11872335	11872515	True	NM_003498,NM_014153	chr16,chr16	+,-	SNN,ZC3H7A	-110105,18659
chr1:38478618-38479680	chr1	+	38478631	38479370	True	NM_004468,NM_016037	chr1,chr1	-,+	FHL3,UTP11L	-7397,-301
chr11:796041-796256	chr11	+	796062	796246	True	NM_145887,NM_145886,NM_024698,NM_001191060,NM_001191061,NM_001004,NM_016564	chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,-,+,-	LRDD,LRDD,SLC25A22,SLC25A22,SLC25A22,RPLP2,CEND1	9054,9054,67,1799,2073,13689,-5936
chr11:2949641-2949853	chr11	+	2949643	2949815	True	NM_002555,NM_003311	chr11,chr11	+,-	SLC22A18,PHLDA2	-26183,885
chr4:189023206-189023732	chr4	+	189023369	189023745	True	NM_173553,NM_178556	chr4,chr4	-,+	TRIML2,TRIML1	2723,36852
chr19:20598681-20600519	chr19	+	20599066	20600360	True	NR_036455,NM_052852	chr19,chr19	-,+	ZNF826P,ZNF486	7461,-321039
chr13:19795808-19797291	chr13	+	19795906	19796604	True	NM_006001,NR_034026	chr13,chr13	-,+	TUBA3C,LOC100287114	-39914,122584
chr15:59935624-59936387	chr15	+	59935736	59935799	True	NM_004751,NM_004492	chr15,chr15	+,-	GCNT3,GTF2A2	-31808,13991
chrX:135572780-135574447	chrX	+	135573081	135574162	True	NM_001163280,NM_001727,NM_014500,NM_001173516	chrX,chrX,chrX,chrX	+,+,+,-	HTATSF1,BRS3,HTATSF1,MAP7D3	5075,-3021,5508,-234440
chr5:179500169-179500465	chr5	+	179500190	179500266	True	NM_003900,NM_018434	chr5,chr5	+,-	SQSTM1,RNF130	-252399,-1081
chr16:46657456-46658038	chr3	+	128807375	128807694	False	NM_001204886,NM_000174	chr3,chr3	-,+	RAB43,GP9	33003,-27781
chr16:46657456-46658038	chr16	+	46657746	46658066	True	NM_014321,NM_024745	chr16,chr16	+,-	ORC6,SHCBP1	65491,-2435
chr8:6419970-6421593	chr8	+	6420015	6421359	True	NM_001118888,NM_018361,NM_001147,NM_001118887	chr8,chr8,chr8,chr8	-,+,-,-	ANGPT2,AGPAT5,ANGPT2,ANGPT2	-7,144518,-7,-7
chr2:129077630-129078126	chr2	+	129077664	129077996	True	NM_004807,NR_027671	chr2,chr2	-,+	HS6ST1,UGGT1	-1493,-228933
chr12:112278254-112278789	chr12	+	112278446	112278549	True	NR_015404,NM_139078,NM_003668	chr12,chr12,chr12	-,+,+	C12orf47,MAPKAPK5,MAPKAPK5	2220,1729,1729
chr2:91933165-91933947	chr2	+	91933392	91933846	True	NR_003503,NR_027238	chr2,chr2	+,-	GGT8P,LOC654342	29521,-85417
chr16:1428783-1429049	chr16	+	1428905	1429031	True	NM_032520,NM_001193389,NM_023076	chr16,chr16,chr16	+,-,-	GNPTG,UNKL,UNKL	-27056,703,703
chr5:118294099-118294799	chr5	+	118294421	118294839	True	NM_173666,NR_036052	chr5,chr5	-,+	DTWD2,MIR1244-1	29453,15441
chrX:150884501-150884821	chrX	+	150884532	150884812	True	NR_029973,NM_033085	chrX,chrX	-,+	MIR452,FATE1	243422,-75
chr11:2294100-2294415	chr11	+	2294136	2294445	True	NM_139022,NM_005170	chr11,chr11	+,-	TSPAN32,ASCL2	28797,-1954
chr12:76663747-76664314	chr12	+	76663791	76664240	True	NM_015336,NM_024685	chr12,chr12	+,-	ZDHHC17,BBS10	493613,78037
chr16:68481315-68482099	chr16	+	68481504	68482099	True	NM_133458,NM_018667	chr16,chr16	+,-	ZFP90,SMPD3	91561,360
chr2:109605813-109606607	chr2	+	109605884	109606466	True	NM_022336,NM_001099289	chr2,chr2	-,+	EDAR,SH3RF3	-56,139530
chr3:137742640-137742940	chr3	+	137742663	137742851	True	NM_016369,NM_001170538	chr3,chr3	+,-	CLDN18,DZIP1L	-13708,89521
chr6:121625973-121626209	chr6	+	121626088	121626242	True	NM_152730,NM_000165	chr6,chr6	-,+	C6orf170,GJA1	29452,130502
chr19:1449005-1449765	chr19	+	1449029	1449571	True	NM_152482,NM_005883	chr19,chr19	-,+	C19orf25,APC2	29707,576
chr17:57641842-57642656	chr17	+	57641984	57642690	True	NM_016077,NM_024612,NM_001166301	chr17,chr17,chr17	-,+,+	PTRH2,DHX40,DHX40	142216,195,195
chr1:223126371-223126831	chr1	+	223126414	223126860	True	NM_032890,NM_003268	chr1,chr1	+,-	DISP1,TLR5	-138047,189814
chr11:89951322-89952288	chr11	+	89951413	89951901	True	NM_012124,NM_005467,NM_001144073	chr11,chr11,chr11	-,+,-	CHORDC1,NAALAD2,CHORDC1	4681,-83649,4681
chr4:85501346-85503326	chr4	+	85501387	85503353	True	NM_001263,NM_006168	chr4,chr4	+,-	CDS1,NKX6-1	703,-82000
chr12:109123924-109124245	chr12	+	109123939	109124119	True	NM_001917,NM_014325	chr12,chr12	+,-	DAO,CORO1C	149737,1230
chr3:184453190-184453685	chr3	+	184453193	184453608	True	NM_001009921,NM_022149	chr3,chr3	+,-	VPS8,MAGEF1	76322,-23357
chr13:111370028-111370931	chr13	+	111370196	111370940	True	NM_198218,NM_198219,NM_005537,NM_024537,NM_198217	chr13,chr13,chr13,chr13,chr13	+,+,+,-,+	ING1,ING1,ING1,CARS2,ING1	-4642,-4627,-2893,-11716,-5169
chr16:280517-282030	chr16	+	281073	281936	True	NM_201412,NM_018032,NM_032039	chr16,chr16,chr16	-,-,+	LUC7L,LUC7L,ITFG3	-1624,-1624,2864
chr20:62689372-62690158	chr20	+	62689408	62690108	True	NM_198723,NM_018419,NM_003195	chr20,chr20,chr20	+,-,+	TCEA2,SOX18,TCEA2	-1020,-8429,3901
chr22:31743370-31743625	chr22	+	31743374	31743660	True	NM_014323,NM_004147,NM_032051,NM_032050,NM_032052	chr22,chr22,chr22,chr22,chr22	-,+,-,-,-	PATZ1,DRG1,PATZ1,PATZ1,PATZ1	-1125,51878,-1125,-1125,-1125
chr15:102507088-102507753	chr9	-	23801	23935	False	NM_182905,NM_203447	chr9,chr9	-,+	WASH1,DOCK8	5854,190929
chr15:102507088-102507753	chr19	-	65180	65430	False	NM_001005240,NR_033266	chr19,chr19	+,-	OR4F17,WASH5P	45248,5586
chr15:102507088-102507753	chr1	-	23572	23822	False	NM_001005221,NR_028325	chr1,chr1	-,+	OR4F29,LOC100132062	598262,300069
chr15:102507088-102507753	chr2	+	114347195	114347245	True	NR_024077,NR_024005	chr2,chr2	+,-	WASH2P,DDX11L2	-6016,11958
chr1:894922-895126	chr1	+	894923	895151	True	NM_015658,NM_198317,NM_001160184,NM_032129	chr1,chr1,chr1,chr1	-,+,+,+	NOC2L,KLHL17,PLEKHN1,PLEKHN1	-244,815,6725,6725
chr19:1402533-1402855	chr19	+	1402601	1402731	True	NM_138924,NM_018959,NM_170711,NM_000156	chr19,chr19,chr19,chr19	-,+,+,-	GAMT,DAZAP1,DAZAP1,GAMT	-1049,4852,4852,-1049
chr9:138390409-138390626	chr9	+	138390454	138390658	True	NM_144654,NM_001048265,NM_016034	chr9,chr9,chr9	-,-,+	C9orf116,C9orf116,MRPS2	1153,1153,1824
chr1:200297921-200298175	chr1	+	200297970	200298036	True	NM_001105517,NM_012482	chr1,chr1	+,-	FAM58B,ZNF281	-115365,81180
chr1:151032299-151032957	chr1	+	151032438	151032814	True	NM_001038707,NM_006818,NM_020239	chr1,chr1,chr1	-,+,-	CDC42SE1,MLLT11,CDC42SE1	-313,-338,-313
chr12:53772247-53772669	chr12	+	53772288	53772702	True	NM_138473,NM_001173467,NM_003109	chr12,chr12,chr12	+,-,+	SP1,SP7,SP1	1276,-42284,1725
chr8:22960876-22961171	chr8	+	22960976	22961218	True	NM_003841,NR_027140	chr8,chr8	+,-	TNFRSF10C,TNFRSF10B	-700,-34276
chr6:46884198-46885839	chr6	+	46884278	46885854	True	NM_001098518,NM_005588	chr6,chr6	-,+	GPR116,MEP1A	3912,-123242
chr14:23236153-23236419	chr14	+	23236197	23236429	True	NM_005015,NM_001126105	chr14,chr14	+,-	OXA1L,SLC7A7	-517,48693
chr4:17786751-17787868	chr4	+	17787227	17787769	True	NM_015688,NM_022346	chr4,chr4	-,+	FAM184B,NCAPG	-4092,24755
chr11:616991-617372	chr11	+	617020	617296	True	NM_004031,NM_000797,NM_004029,NM_001171968,NM_021924,NM_021920,NM_001572,NM_031264	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,+,-,-,-,-,-,-	IRF7,DRD4,IRF7,CDHR5,CDHR5,SCT,IRF7,CDHR5	-1292,20008,-1021,7821,7821,9927,-1021,7821
chr15:40545816-40546171	chr15	+	40546022	40546220	True	NM_020168,NM_001039905	chr15,chr15	+,-	PAK6,C15orf56	-14038,-912
chr3:119515898-119517409	chr3	+	119516291	119517385	True	NM_005694,NM_022002	chr3,chr3	-,+	COX17,NR1I2	-120048,-14785
chr5:146355993-146356966	chr5	+	146356100	146356782	True	NM_145001,NM_181674	chr5,chr5	+,-	STK32A,PPP2R2B	257796,78974
chr5:137514380-137514624	chr5	+	137514437	137514643	True	NM_005733,NM_139199,NM_001164326,NM_006696	chr5,chr5,chr5,chr5	+,-,-,-	KIF20A,BRD8,BRD8,BRD8	-71,-79,-79,-79
chr3:112739832-112741596	chr3	+	112740094	112741562	True	NM_015412,NR_027794,NR_027796,NM_138485	chr3,chr3,chr3,chr3	-,-,-,+	C3orf17,C3orf17,C3orf17,GTPBP8	-1539,-1539,-1539,-30345
chr1:45255261-45257240	chr1	+	45255407	45257074	True	NM_004073,NM_153274	chr1,chr1	+,-	PLK3,BEST4	8961,-1981
chr14:102826651-102827832	chr14	+	102826786	102827702	True	NM_001177612,NM_001177611,NM_032630,NM_014844,NM_001172631	chr14,chr14,chr14,chr14,chr14	-,-,-,+,+	CINP,CINP,CINP,TECPR2,TECPR2	1601,1399,1601,1597,1597
chr16:87984644-87984861	chr16	+	87984712	87984824	True	NM_001173542,NM_001173541,NM_001173539,NM_017869,NM_079837,NM_001173540,NM_001739	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,+,-	BANP,BANP,BANP,BANP,BANP,BANP,CA5A	8652,213,213,213,213,213,-14600
chr12:49352567-49353173	chr12	+	49352723	49352942	True	NM_001659,NM_005430	chr12,chr12	-,+	ARF3,WNT1	-1471,19293
chr6:96480080-96480874	chr6	+	96480139	96480867	True	NM_001143957,NM_006581	chr6,chr6	-,+	GPR63,FUT9	804536,-16353
chr12:85305217-85306188	chr12	+	85305428	85306044	True	NM_001146335,NM_018057,NM_182767,NM_032165	chr12,chr12,chr12,chr12	-,-,-,+	SLC6A15,SLC6A15,SLC6A15,LRRIQ1	612,612,612,124054
chr16:4423409-4423611	chr16	+	4423453	4423551	True	NM_016069,NM_138440	chr16,chr16	-,+	PAM16,VASN	-22080,-1655
chr9:117150110-117151490	chr9	+	117150129	117151351	True	NM_030767,NM_000608	chr9,chr9	-,+	AKNA,ORM2	5384,-58111
chr19:45683296-45683668	chr19	+	45683362	45683482	True	NM_212550,NM_024108	chr19,chr19	+,-	BLOC1S3,TRAPPC6A	-1410,-1877
chr16:66783837-66784139	chr16	+	66783838	66784174	True	NM_005182,NM_006141	chr16,chr16	+,-	CA7,DYNC1LI2	94107,1401
chr12:52281490-52281750	chr12	+	52281586	52281748	True	NM_182608,NM_001130015,NM_001013690	chr12,chr12,chr12	+,+,-	ANKRD33,ANKRD33,FIGNL2	44,44,-55885
chr8:42999182-43000616	chr8	+	42999482	43000564	True	NR_027669,NM_152419	chr8,chr8	-,+	RNF170,HGSNAT	-247616,-3941
chr6:49676640-49676893	chr6	+	49676647	49676924	True	NM_001145652,NM_001142408,NM_001142407,NM_001142417,NM_001142435,NM_003296	chr6,chr6,chr6,chr6,chr6,chr6	+,-,-,-,-,-	C6orf141,CRISP2,CRISP2,CRISP2,CRISP2,CRISP2	-158599,4426,4426,4426,4426,4426
chr2:85921704-85922985	chr2	+	85921911	85922997	True	NM_198843,NM_012483,NM_006433	chr2,chr2,chr2	-,+,+	SFTPB,GNLY,GNLY	-26047,-548,-548
chr9:102586437-102586888	chr9	+	102586590	102586788	True	NM_173199,NM_015051,NM_173200,NM_006981	chr9,chr9,chr9,chr9	+,-,+,+	NR4A3,ERP44,NR4A3,NR4A3	-2504,274592,2220,-2504
chr7:54612790-54613050	chr7	+	54612906	54612974	True	NM_182546,NM_001012456	chr7,chr7	+,-	VSTM2A,SEC61G	-2938,214015
chrX:135333712-135334165	chrX	+	135333717	135334197	True	NM_024597,NM_001173516,NM_001173517,NM_153834	chrX,chrX,chrX,chrX	-,-,-,+	MAP7D3,MAP7D3,MAP7D3,GPR112	21,4494,21,48924
chr14:64751333-64751860	chr14	+	64751386	64751908	True	NM_182910,NM_001040275,NM_001437	chr14,chr14,chr14	+,-,-	SYNE2,ESR2,ESR2	-68770,9270,9270
chr9:34612901-34614810	chr9	+	34612987	34614859	True	NM_000155,NM_024348,NM_148178,NM_148179,NM_007234	chr9,chr9,chr9,chr9,chr9	+,-,-,-,-	GALT,DCTN3,C9orf23,C9orf23,DCTN3	31775,5687,-886,-886,5687
chr1:155177407-155177676	chr1	+	155177418	155177622	True	NM_002455,NM_198883,NM_007112	chr1,chr1,chr1	+,+,-	MTX1,MTX1,THBS3	867,867,118
chr14:77495806-77496124	chr14	+	77495856	77495956	True	NM_024496,NM_033426	chr14,chr14	-,+	IRF2BPL,KIAA1737	-822,68621
chr5:139940286-139941439	chr5	+	139940495	139941284	True	NM_133172,NM_001035235,NM_133174,NM_133173,NM_080670,NM_006051	chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,+,-	APBB3,SRA1,APBB3,APBB3,SLC35A4,APBB3	2955,-2817,2955,2955,3135,2955
chr19:13260432-13260803	chr19	+	13260531	13260713	True	NM_004907,NM_003765	chr19,chr19	+,-	IER2,STX10	568,324
chr11:63332210-63332867	chr11	+	63332348	63332850	True	NM_017878,NM_004585	chr11,chr11	-,+	HRASLS2,RARRES3	-1493,-28126
chr8:104160887-104161821	chr8	+	104160931	104161818	True	NR_036106,NM_024812,NR_027071,NM_001024372	chr8,chr8,chr8,chr8	+,+,-,+	MIR3151,BAALC,C8orf56,BAALC	5023,-8061,-7361,-8061
chr11:2443715-2443941	chr11	+	2443764	2443990	True	NM_005706,NM_014555	chr11,chr11	+,-	TSSC4,TRPM5	-20292,335
chr5:1553747-1554386	chr5	+	1553752	1554402	True	NM_024830,NM_004553	chr5,chr5	-,+	LPCAT1,NDUFS6	-29676,247093
chr15:69221595-69221929	chr15	+	69221614	69221740	True	NR_033672,NM_145658,NM_001184780,NR_033671,NM_006305	chr15,chr15,chr15,chr15,chr15	+,+,+,+,-	NOX5,SPESP1,NOX5,NOX5,ANP32A	1098,1098,1098,1123,-108353
chr19:53773668-53774513	chr19	+	53774072	53774404	True	NM_001195187,NM_173857	chr19,chr19	+,-	LOC646508,VN1R4	10406,-3154
chr19:53773668-53774513	chr19	-	53816339	53816497	False	NM_138374,NM_033341	chr19,chr19	+,-	ZNF845,BIRC8	20504,-21464
chr6:36647580-36648044	chr6	+	36647698	36648040	True	NR_037491,NM_078467,NM_000389,NR_037152,NR_037150,NR_037151	chr6,chr6,chr6,chr6,chr6,chr6	-,+,+,+,+,+	MIR3925,CDKN1A,CDKN1A,CDKN1A,CDKN1A,CDKN1A	-57409,-3482,-1293,-3512,-3435,-1262
chr9:84560087-84561074	chr9	+	84560264	84561122	True	NM_005077,NM_207416	chr9,chr9	-,+	TLE1,FAM75D3	-256668,-1900
chr9:84560087-84561074	chr9	+	84545172	84546030	False	NM_001145197,NM_005077	chr9,chr9	+,-	FAM75D4,TLE1	-1880,-241576
chr3:182972473-182972772	chr3	+	182972516	182972820	True	NM_032047,NM_014398	chr3,chr3	+,-	B3GNT5,LAMP3	-1535,-91849
chr19:42947596-42947860	chr19	+	42947652	42947796	True	NM_198477,NM_001410	chr19,chr19	-,+	CXCL17,MEGF8	-516,-117942
chr19:42947596-42947860	chr19	-	42254350	42254412	False	NM_002483,NM_006890	chr19,chr19	+,-	CEACAM6,CEACAM7	4985,-62254
chr18:9914105-9914353	chr18	+	9914109	9914343	True	NM_194434,NM_005134,NM_003574	chr18,chr18,chr18	+,-,+	VAPA,PPP4R1,VAPA	-205,-299509,-205
chr11:123885251-123886714	chr11	+	123885482	123886183	True	NM_001001953,NM_001004463,NM_001004462	chr11,chr11,chr11	+,-,+	OR10G9,OR10G7,OR10G4	7536,23576,98
chr8:7982634-7983082	chr8	+	7982882	7982949	True	NR_031689,NR_024362	chr8,chr8	-,+	MIR548I3,FLJ10661	-36271,103142
chr8:7982634-7983082	chr8	-	7019571	7019638	False	NR_027000,NM_001164452	chr8,chr8	-,+	LOC349196,FAM90A14	101435,94787
chr16:67217838-67218282	chr16	+	67217846	67218318	True	NM_001950,NM_178516,NM_001040715	chr16,chr16,chr16	+,-,-	E2F4,EXOC3L1,KIAA0895L	7749,5839,37
chr6:33759603-33759873	chr6	+	33759644	33759864	True	NM_001143944,NM_002224,NM_181336	chr6,chr6,chr6	-,+,-	LEMD2,ITPR3,LEMD2	-4925,-170550,-2738
chr11:113344186-113345083	chr11	+	113344294	113345050	True	NM_016574,NM_178510,NM_000795	chr11,chr11,chr11	-,+,-	DRD2,ANKK1,DRD2	1001,-85832,1001
chr1:63787723-63788007	chr1	+	63787793	63787861	True	NM_012183,NM_014288	chr1,chr1	+,-	FOXD3,ITGB3BP	868,201024
chr7:102990084-102991611	chr7	+	102990186	102991636	True	NM_001204453,NM_001129887,NM_002803,NM_014377	chr7,chr7,chr7,chr7	+,-,+,-	PSMC2,DNAJC2,PSMC2,DNAJC2	-2272,-4866,-2272,-4866
chr11:68610326-68610630	chr11	+	68610344	68610676	True	NM_001031847,NM_002180,NM_001876	chr11,chr11,chr11	-,+,-	CPT1A,IGHMBP2,CPT1A	-945,60642,-945
chr22:31029469-31030004	chr22	+	31029805	31029880	True	NM_001001479,NR_036550	chr22,chr22	+,-	SLC35E4,PES1	1912,-26805
chr5:176941439-176941823	chr5	+	176941601	176941675	True	NM_001144875,NM_001174102,NM_024872,NM_001144876,NM_016222	chr5,chr5,chr5,chr5,chr5	-,+,-,-,-	DOK3,PRR7,DOK3,DOK3,DDX41	-4174,-66326,-4743,-4174,2342
chr1:157160057-157160707	chr1	+	157160065	157160667	True	NM_001145312,NR_001560	chr1,chr1	-,+	ETV3,CYCSP52	-51682,-61962
chr3:183753836-183754536	chr3	+	183753846	183754466	True	NM_182537,NM_001023587,NM_001145143,NM_001163646	chr3,chr3,chr3,chr3	+,-,+,+	HTR3D,ABCC5,HTR3D,HTR3D	-4565,-18119,-4367,-3278
chr9:33240059-33241273	chr9	+	33240097	33241307	True	NM_014471,NM_001172415	chr9,chr9	+,-	SPINK4,BAG1	48,23502
chr17:46114297-46114533	chr17	+	46114324	46114570	True	NM_003204,NR_029687,NM_016429	chr17,chr17,chr17	+,-,-	NFE2L1,MIR152,COPZ2	11115,93,632
chr10:104193751-104194418	chr10	+	104193777	104194240	True	NM_024040,NR_030169	chr10,chr10	-,+	CUEDC2,MIR146B	-1354,2028
chr6:166720536-166720784	chr6	+	166720591	166720779	True	NM_175922,NR_027284	chr6,chr6	-,+	PRR18,LOC441177	1142,-319603
chr21:46963041-46963403	chr21	+	46963045	46963451	True	NM_130444,NM_194255,NM_001205206,NM_001205207	chr21,chr21,chr21,chr21	+,-,-,-	COL18A1,SLC19A1,SLC19A1,SLC19A1	-87672,-660,-660,-8503
chr16:85928991-85929934	chr16	+	85929101	85929983	True	NM_002163,NM_006067	chr16,chr16	+,-	IRF8,COX4NB	2790,-95953
chr13:73384194-73385153	chr13	+	73384332	73384989	True	NM_006346,NM_014953	chr13,chr13	+,-	PIBF1,DIS3	-28169,-27988
chr1:12185369-12185597	chr1	+	12185395	12185605	True	NM_152942,NM_138346	chr1,chr1	+,-	TNFRSF8,KIAA2013	352,-198910
chr10:127565193-127566177	chr10	+	127565212	127565864	True	NM_018180,NM_145235	chr10,chr10	-,+	DHX32,FANK1	4078,19243
chr20:33292550-33292804	chr20	+	33292669	33292791	True	NM_080476,NM_021202	chr20,chr20	-,+	PIGU,TP53INP2	-27580,-572
chr5:126479301-126480580	chr5	+	126479352	126480603	True	NM_032446,NM_001164478	chr5,chr5	+,-	MEGF10,FLJ44606	145852,-70168
chr7:56033432-56033763	chr7	+	56033613	56033787	True	NM_001202469,NM_001483,NM_004577	chr7,chr7,chr7	+,+,-	GBAS,GBAS,PSPH	-1394,-1394,85531
chr10:916002-917598	chr10	+	916170	917439	True	NM_015155,NM_012341	chr10,chr10	-,+	LARP4B,GTPBP4	14313,116909
chr1:8940458-8940825	chr1	+	8940497	8940871	True	NM_001215,NM_001201483,NM_001428	chr1,chr1,chr1	+,-,-	CA6,ENO1,ENO1	65050,-8862,-1346
chr19:7854244-7854568	chr19	+	7854318	7854512	True	NR_026692,NR_002931	chr19,chr19	-,+	CD209,CLEC4GP1	-41854,-1999
chrX:54641017-54642228	chrX	+	54641094	54642139	True	NM_004463,NM_019067	chrX,chrX	-,+	FGD1,GNL3L	-118495,-84501
chr1:229643962-229644209	chr1	+	229643999	229644205	True	NM_018230,NM_014777	chr1,chr1	-,+	NUP133,URB2	5,117775
chr8:66546716-66547501	chr8	+	66546839	66547464	True	NM_018120,NM_014637,NM_001145839	chr8,chr8,chr8	-,+,+	ARMC1,MTFR1,MTFR1	-387,9423,9423
chr21:10973530-10974852	chr21	+	10973537	10974215	True	NM_199259,NR_037458	chr21,chr21	-,+	TPTE,MIR3687	16755,-1147394
chr16:2317221-2317514	chr4	-	11370784	11371072	False	NR_030298,NM_005114	chr4,chr4	+,-	MIR572,HS3ST1	-384,59516
chr16:2317221-2317514	chr16	+	2317259	2317547	True	NR_037448,NM_080594,NM_006711,NR_030636	chr16,chr16,chr16,chr16	+,-,-,+	MIR3677,RNPS1,RNPS1,MIR940	3166,916,361,4200
chr2:128296300-128297830	chr2	+	128296442	128297184	True	NM_017969,NM_001080527	chr2,chr2	-,+	IWS1,MYO7B	-12355,-3116
chr3:141450633-141452632	chr3	+	141450842	141452615	True	NM_001201370,NM_183237,NR_037703,NR_037702,NM_001178140,NM_014245	chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,-,+	RNF7,RNF7,RNF7,RNF7,TFDP2,RNF7	4435,4435,4435,4435,266664,4435
chr1:40349500-40349892	chr1	+	40349636	40349886	True	NM_001136493,NM_017646	chr1,chr1	+,-	MFSD2A,TRIT1	70897,-459
chr11:74951177-74951414	chr11	+	74951325	74951443	True	NM_001195528,NR_029891	chr11,chr11	+,-	LOC441617,MIR326	506,94837
chr12:95042294-95043148	chr12	+	95042354	95043130	True	NM_020698,NR_030171	chr12,chr12	-,+	TMCC3,MIR492	1244,185043
chr16:2768959-2769286	chr16	+	2769100	2769184	True	NM_016333,NM_031948	chr16,chr16	+,-	SRRM2,PRSS27	33145,1418
chr17:31253794-31254372	chr17	+	31254194	31254392	True	NM_001033504,NM_015544,NM_015194	chr17,chr17,chr17	+,+,-	TMEM98,TMEM98,MYO1D	535,535,-50292
chr17:36454527-36455014	chr17	+	36454532	36454804	True	NR_036750,NM_032351	chr17,chr17	-,+	LOC440434,MRPL45	-41276,-1585
chr17:36454527-36455014	chr17	-	45568168	45568440	False	NR_033934,NM_006310	chr17,chr17	-,+	MRPL45P2,NPEPPS	1596,40003
chr19:18700026-18700232	chr19	+	18700053	18700197	True	NM_004750,NM_001100419,NM_001100418	chr19,chr19,chr19	-,+,+	CRLF1,C19orf60,C19orf60	17513,-609,-609
chr5:180073135-180073427	chr5	+	180073143	180073465	True	NM_002020,NM_182925,NM_015455	chr5,chr5,chr5	-,-,+	FLT4,FLT4,CNOT6	3209,3209,-151777
chr1:159168577-159169548	chr1	+	159168586	159169506	True	NM_002036,NR_037870,NM_001122951	chr1,chr1,chr1	+,-,+	DARC,LOC100131825,DARC	4296,2757,5542
chr16:20420518-20421625	chr16	+	20420623	20421537	True	NM_174924,NM_017888	chr16,chr16	-,+	PDILT,ACSM5	-4590,92
chr16:89643966-89644631	chr16	+	89643970	89644450	True	NM_153636,NM_001083314,NM_014427	chr16,chr16,chr16	+,-,+	CPNE7,CHMP1A,CPNE7	-1845,79729,-1845
chr9:41608454-41609238	chr9	+	41608649	41609213	True	NM_001113541,NR_003528	chr9,chr9	+,-	FAM75A5,LOC653501	-108021,381
chr9:41608454-41609238	chr9	+	39463631	39464195	False	NM_001040065,NR_003528	chr9,chr9	+,-	FAM75A2,LOC653501	-107983,381
chr9:41608454-41609238	chr9	+	40791233	40791640	False	NR_026801,NM_033160	chr9,chr9	+,-	FAM74A3,ZNF658	-75760,528
chr10:127370982-127372751	chr10	+	127371257	127372790	True	NR_033848,NM_001128202	chr10,chr10	+,-	LOC283038,C10orf122	-14,-62
chr11:118899463-118900335	chr11	+	118899545	118900319	True	NR_037429,NM_001164280,NM_001164279,NM_001164278,NM_001467,NM_001164277	chr11,chr11,chr11,chr11,chr11,chr11	+,-,-,-,-,-	MIR3656,SLC37A4,SLC37A4,SLC37A4,SLC37A4,SLC37A4	-9942,9,1347,1347,1347,1347
chr19:41104715-41105124	chr19	+	41104742	41105140	True	NM_001042544,NM_001042545,NM_004756,NM_003573	chr19,chr19,chr19,chr19	+,+,-,+	LTBP4,LTBP4,NUMBL,LTBP4	-1658,2136,91466,-5727
chr10:129535811-129536062	chr10	+	129535894	129535986	True	NM_207426,NM_152311	chr10,chr10	+,-	FOXI2,CLRN3	-407,155275
chr9:117687067-117688632	chr9	+	117687284	117688378	True	NM_017418,NM_001244	chr9,chr9	+,-	DEC1,TNFSF8	215718,4442
chr12:103889958-103890586	chr12	+	103890070	103890506	True	NM_198521,NM_017564,NM_001099336	chr12,chr12,chr12	-,+,-	C12orf42,STAB2,C12orf42	-324,90562,-321
chr14:39582245-39583380	chr14	+	39582381	39583415	True	NM_006364,NM_003616,NM_001009183,NM_001009182	chr14,chr14,chr14,chr14	-,+,+,+	SEC23A,SIP1,SIP1,SIP1	-9944,72,72,72
chr6:88193417-88193862	chr6	+	88193435	88193881	True	NM_006416,NM_020320	chr6,chr6	+,-	SLC35A1,RARS2	-10843,105904
chr7:74343883-74345871	chr7	+	74343995	74345864	True	NM_001025202,NM_001145063	chr7,chr7	-,+	STAG3L2,GATSL1	-37264,33218
chr7:74343883-74345871	chr7	-	99886234	99888102	False	NM_001004351,NR_028038	chr7,chr7	+,-	SPDYE3,GATS	17222,-16379
chr7:74343883-74345871	chr7	+	72534501	72536370	False	NR_003664,NR_003580	chr7,chr7	-,+	SPDYE8P,LOC100093631	-34192,32641
chr7:74343883-74345871	chr7	-	74900522	74902391	False	NM_001145064,NR_003664	chr7,chr7	-,+	GATSL2,SPDYE8P	-33181,34141
chr7:74343883-74345871	chr7	-	74686265	74688134	False	NM_001003795,NR_003580	chr7,chr7	+,-	GTF2IRD2B,LOC100093631	-177969,-32806
chr5:137422065-137422589	chr5	+	137422219	137422320	True	NM_003551,NM_058244	chr5,chr5	-,+	NME5,WNT8A	52871,-2496
chr4:120063700-120065428	chr4	+	120063821	120065465	True	NM_016599,NM_001001701	chr4,chr4	+,-	MYOZ2,C4orf3	-6943,156555
chr21:47398878-47399246	chr21	+	47398982	47399139	True	NM_001848,NM_006657	chr21,chr21	+,-	COL6A1,FTCD	2523,176393
chr2:128640761-128642246	chr2	+	128641182	128642265	True	NM_032740,NM_031445,NM_001199140	chr2,chr2,chr2	+,-,-	SFT2D3,AMMECR1L,AMMECR1L	-182649,219,1299
chr11:60973625-60974045	chr11	+	60973660	60974028	True	NM_001079807,NM_017966	chr11,chr11	+,-	PGA3,VPS37C	-2727,-44744
chr11:60973625-60974045	chr11	+	60992489	60992857	False	NM_017966,NM_001079808	chr11,chr11	-,+	VPS37C,PGA4	-63573,-2719
chr11:60973625-60974045	chr11	+	61011315	61011683	False	NM_014224,NM_152718	chr11,chr11	+,-	PGA5,VWCE	-2722,51155
chr2:71559365-71559593	chr2	+	71559455	71559639	True	NM_020459,NM_001014972,NM_014497	chr2,chr2,chr2	-,+,+	PAIP2B,ZNF638,ZNF638	-105222,-617,-617
chr19:13057733-13058740	chr19	+	13057903	13058781	True	NM_005053,NM_004343,NM_052850	chr19,chr19,chr19	+,+,-	RAD23A,CALR,GADD45GIP1	-1311,-8551,9319
chr6:137243580-137244128	chr6	+	137243635	137244176	True	NR_027994,NM_001008783	chr6,chr6	-,+	NHEG1,SLC35D3	70242,-284
chr17:48350865-48351217	chr17	+	48350889	48351073	True	NM_153229,NM_001168215,NM_000088	chr17,chr17,chr17	+,+,-	TMEM92,TMEM92,COL1A1	714,-2173,-71889
chr7:150776878-150777304	chr7	+	150777175	150777279	True	NM_031434,NM_031946,NM_001042535,NM_001136044,NM_033015,NM_006712	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,-,-,-	TMUB1,AGAP3,AGAP3,TMUB1,FASTK,FASTK	3184,6546,6546,3391,722,722
chr19:11913956-11914940	chr19	+	11914141	11914708	True	NM_152356,NM_001080493	chr19,chr19	+,-	ZNF491,ZNF823	-4810,-64381
chr10:60145694-60147167	chr10	+	60145824	60147105	True	NM_152230,NM_003201	chr10,chr10	-,+	IPMK,TFAM	-118130,-707
chr7:98873644-98874130	chr7	+	98873755	98873997	True	NM_001145715,NR_002147	chr7,chr7	-,+	KPNA7,MYH16	-68666,-2888
chr8:142428348-142429203	chr8	+	142428415	142429065	True	NM_005293,NM_007079,NM_032611	chr8,chr8,chr8	-,+,+	GPR20,PTP4A3,PTP4A3	-51050,2941,2941
chr2:46807631-46809309	chr2	+	46807726	46809291	True	NM_002643,NM_014171	chr2,chr2	-,+	PIGF,CRIPT	35023,35033
chrX:101103957-101105560	chrX	+	101103958	101105327	True	NM_032946,NR_028089,NM_177948	chrX,chrX,chrX	-,-,+	NXF5,NXF5,ARMCX3	7283,7283,-225660
chr12:15374021-15374298	chr12	+	15374027	15374287	True	NM_002848,NM_032918,NM_001190726	chr12,chr12,chr12	+,-,-	PTPRO,RERG,RERG	101199,174,174
chr13:19585269-19586370	chr13	+	19585432	19586254	True	NR_002801,NR_026852	chr13,chr13	-,+	PHF2P1,LOC348021	106219,-3091
chr13:23757897-23758899	chr13	+	23758121	23758804	True	NM_000231,NM_014363	chr13,chr13	+,-	SGCG,SACS	-3123,249087
chr1:145516100-145516438	chr1	+	145516217	145516475	True	NR_002328,NM_003846,NM_001184795,NM_003637,NM_005105	chr1,chr1,chr1,chr1,chr1	-,+,+,+,+	GNRHR2,PEX11B,PEX11B,ITGA10,RBM8A	-141,-103,84,8514,-8711
chr1:160332684-160334511	chr1	+	160332918	160334401	True	NM_004371,NM_005598	chr1,chr1	-,+	COPA,NHLH1	-19564,2459
chr6:153451648-153451878	chr6	+	153451647	153451851	True	NM_194435,NM_012419	chr6,chr6	+,-	VIP,RGS17	-379768,588
chr1:57110918-57111168	chr1	+	57111066	57111180	True	NM_003713,NM_006252	chr1,chr1	-,+	PPAP2B,PRKAA2	-65809,-127
chr9:92255948-92256966	chr9	+	92256173	92256980	True	NR_024280,NM_006378	chr9,chr9	+,-	LOC100129066,SEMA4D	-1526,-161562
chrX:31280298-31280877	chrX	+	31280393	31280852	True	NM_203391,NM_004018,NM_004019,NM_004015,NM_004016,NM_004017	chrX,chrX,chrX,chrX,chrX,chrX	+,-,-,-,-,-	GK,DMD,DMD,DMD,DMD,DMD	-608976,4229,4229,4229,4229,4229
chr14:59932271-59933819	chr14	+	59932275	59933837	True	NM_022571,NM_001098625	chr14,chr14	-,+	GPR135,JKAMP	-216,17323
chr7:112553998-112554428	chr7	+	112554016	112554293	True	NM_152556,NM_182597	chr7,chr7	-,+	C7orf60,C7orf53	25696,-433013
chr11:118925951-118926260	chr11	+	118926007	118926291	True	NM_021729,NM_006389,NM_001130991	chr11,chr11,chr11	+,-,-	VPS11,HYOU1,HYOU1	12201,1675,1684
chr14:21061442-21062408	chr14	+	21061830	21062416	True	NM_001024822,NM_145250,NM_001012975	chr14,chr14,chr14	-,-,+	RNASE12,RNASE11,RNASE10	-2848,-3413,-83250
chr1:100435003-100435483	chr1	+	100435007	100435361	True	NM_012243,NM_194292	chr1,chr1	+,-	SLC35A3,SASS6	178,163200
chr11:82904481-82904697	chr11	+	82904528	82904738	True	NM_182603,NM_021825	chr11,chr11	+,-	ANKRD42,CCDC90B	552,92689
chr4:146002031-146003392	chr4	+	146002090	146003263	True	NM_001040876,NM_014885	chr4,chr4	+,-	ABCE1,ANAPC10	15892,16167
chr14:30397417-30397731	chr14	+	30397442	30397774	True	NM_017769,NM_002742	chr14,chr14	+,-	G2E3,PRKD1	630554,-543
chr6:100439605-100440016	chr6	+	100439713	100439963	True	NM_032503,NM_021620,NM_001040179	chr6,chr6,chr6	-,+,-	MCHR2,PRDM13,MCHR2	2201,-385115,2186
chr12:95937989-95939836	chr12	+	95938235	95939834	True	NM_032147,NM_006838,NM_001042403	chr12,chr12,chr12	-,+,-	USP44,METAP2,USP44	5487,-70464,2844
chr22:39437259-39437588	chr22	+	39437304	39437498	True	NM_145298,NM_001006666,NM_175709	chr22,chr22,chr22	+,+,-	APOBEC3F,APOBEC3F,CBX7	-690,-690,111090
chr11:77530750-77531097	chr11	+	77530824	77531122	True	NM_016578,NM_024684	chr11,chr11	-,+	RSF1,C11orf67	808,1085
chr10:43136481-43137427	chr10	+	43136546	43137261	True	NM_014753,NM_006955	chr10,chr10	+,-	BMS1,ZNF33B	140692,-2554
chr1:25561865-25562084	chr1	+	25562039	25562101	True	NM_001127691,NM_207170,NM_015484	chr1,chr1,chr1	+,-,-	RHD,SYF2,SYF2	36879,-3026,-3026
chr6:26924765-26925387	chr6	+	26925317	26925387	True	NR_003504,NR_026775	chr6,chr6	-,+	GUSBL1,NCRNA00240	-984,-600
chr2:98258489-98259797	chr2	+	98259186	98259779	True	NM_001862,NM_005735	chr2,chr2	+,-	COX5B,ACTR1B	2741,20847
chr3:119448413-119449156	chr3	+	119448515	119449177	True	NM_033364,NM_005694	chr3,chr3	+,-	C3orf15,COX17	-26705,-52272
chr16:85045389-85045607	chr16	+	85045394	85045656	True	NM_017740,NM_001145548,NM_014732	chr16,chr16,chr16	-,-,+	ZDHHC7,ZDHHC7,KIAA0513	-253,-253,15753
chr1:171129005-171130408	chr1	+	171129419	171130451	True	NR_002601,NR_031627	chr1,chr1	+,-	FMO6P,MIR1295	-22591,-58472
chr19:47284777-47286574	chr19	+	47284885	47286278	True	NM_001145144,NM_001145145,NM_005628,NM_024301	chr19,chr19,chr19,chr19	-,-,-,+	SLC1A5,SLC1A5,SLC1A5,FKRP	4318,1907,5615,-35633
chr19:54960001-54960235	chr19	+	54960154	54960282	True	NM_198988,NM_052925	chr19,chr19	-,+	LENG9,LENG8	14662,-140
chr5:56515125-56515599	chr5	+	56515323	56515607	True	NM_001127236,NM_001017992	chr5,chr5	+,-	GPBP1,ACTBL2	-5482,263087
chr1:37500857-37501194	chr1	+	37500934	37501221	True	NR_036217,NM_000831	chr1,chr1	+,-	MIR4255,GRIK3	125942,-1090
chr6:133564757-133565376	chr6	+	133564884	133565403	True	NM_172105,NM_052831,NM_004100,NM_172103	chr6,chr6,chr6,chr6	+,-,+,+	EYA4,C6orf192,EYA4,EYA4	-2449,-445137,-2449,-2449
chr19:8641787-8642306	chr19	+	8641851	8642339	True	NM_012335,NM_031203	chr19,chr19	-,+	MYO1F,HNRNPM	42,-132099
chr9:131487173-131487704	chr9	+	131487441	131487719	True	NM_013355,NM_032799	chr9,chr9	+,-	PKN3,ZDHHC12	-22690,-1033
chr7:92077315-92077871	chr7	+	92077427	92077917	True	NM_000466,NM_021167	chr7,chr7	-,+	PEX1,GATAD1	79978,-713
chr20:32700563-32700820	chr20	+	32700624	32700840	True	NM_016732,NM_003908	chr20,chr20	+,-	RALY,EIF2S2	-118950,-539
chr19:17502649-17503001	chr19	+	17502736	17503002	True	NM_004335,NM_138401	chr19,chr19	-,+	BST2,FAM125A	13432,27909
chr14:47811201-47811882	chr14	+	47811351	47811924	True	NM_182830,NM_020937	chr14,chr14	-,+	MDGA2,FANCM	564,-2206273
chr15:55553517-55554594	chr15	+	55553616	55554469	True	NM_004855,NM_004580,NM_183236,NM_183234	chr15,chr15,chr15,chr15	+,-,-,-	PIGB,RAB27A,RAB27A,RAB27A	56663,8168,8690,8067
chr1:94941593-94942903	chr1	+	94941625	94942896	True	NM_002858,NM_001178096	chr1,chr1	+,-	ABCD3,F3	-57750,64574
chr1:204003931-204004668	chr1	+	204004544	204004666	True	NM_005686,NR_027902	chr1,chr1	+,-	SOX13,C1orf157	37579,5776
chr12:21590841-21591165	chr12	+	21590852	21591040	True	NM_134431,NM_024854	chr12,chr12	-,+	SLCO1A2,PYROXD1	-42481,-365
chr9:19242812-19244119	chr9	+	19243102	19243678	True	NR_038064,NM_017925	chr9,chr9	-,+	PLIN2,DENND4C	-115498,47070
chr20:58574667-58575210	chr20	+	58574739	58575209	True	NM_021810,NM_006242	chr20,chr20	+,-	CDH26,PPP1R3D	-3373,-59387
chr12:776113-776984	chr12	+	776189	776814	True	NM_001184985,NM_016533	chr12,chr12	+,-	WNK1,NINJ2	85274,-3434
chr18:32113258-32114167	chr18	+	32113412	32114011	True	NM_003787,NM_032975	chr18,chr18	-,+	NOL4,DTNA	-309897,-40210
chr16:20329150-20329589	chr16	+	20329196	20329556	True	NM_017888,NM_001502,NM_001007240,NM_001007241,NM_001007242	chr16,chr16,chr16,chr16,chr16	+,-,-,-,-	ACSM5,GP2,GP2,GP2,GP2	91299,9329,9329,9329,9329
chr11:7535488-7535711	chr11	+	7535521	7535665	True	NM_003621,NM_016229	chr11,chr11	+,-	PPFIBP2,CYB5R2	-571,159206
chr10:76866947-76867493	chr10	+	76867141	76867341	True	NM_001007271,NM_001007273,NM_001007272,NM_016364,NM_144660,NM_001174156	chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,+,+	DUSP13,DUSP13,DUSP13,DUSP13,SAMD8,SAMD8	1679,1679,1679,-7893,4051,4051
chrX:91035789-91036296	chrY	+	4869905	4870263	False	NM_032971,NR_001540	chrY,chrY	+,-	PCDH11Y,TTTY23	-1689,1241438
chrX:91035789-91036296	chrX	+	91035791	91036308	True	NM_032967,NM_004538	chrX,chrX	+,-	PCDH11X,NAP1L3	-1582,1892424
chr3:184449733-184450632	chr3	+	184449959	184450655	True	NM_001009921,NM_022149	chr3,chr3	+,-	VPS8,MAGEF1	79275,-20123
chr12:99495430-99496404	chr12	+	99495774	99496264	True	NM_181869,NM_020140	chr12,chr12	+,-	APAF1,ANKS1B	-456747,52363
chr4:23721943-23723361	chr4	+	23721997	23723409	True	NM_020973,NM_013261	chr4,chr4	+,-	GBA3,PPARGC1A	-1027501,168341
chr6:166756537-166756779	chr6	+	166756556	166756808	True	NM_145169,NR_027284	chr6,chr6	-,+	SFT2D1,LOC441177	-565,-355568
chr17:72324350-72324577	chr17	+	72324371	72324601	True	NM_153209,NM_001080466	chr17,chr17	+,-	KIF19,BTBD17	-2071,33407
chr5:131349170-131349970	chr5	+	131349248	131349983	True	NM_001205247,NM_001205251,NM_001205250,NM_001205248,NM_000588,NM_015256,NM_001009185	chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,+,-,-	ACSL6,ACSL6,ACSL6,ACSL6,IL3,ACSL6,ACSL6	-1893,-1641,-1487,-1641,46363,-1893,-1893
chr2:190446123-190446441	chr2	+	190446126	190446488	True	NM_019048,NM_014585	chr2,chr2	+,-	ASNSD1,SLC40A1	79636,-589
chr2:128441948-128442272	chr2	+	128441955	128442185	True	NM_001161404,NM_001136037,NM_001161403,NM_032740	chr2,chr2,chr2,chr2	-,-,-,+	LIMS2,LIMS2,LIMS2,SFT2D3	-2595,-9191,-9191,16411
chr22:38838474-38839032	chr22	+	38838580	38839078	True	NM_016657,NM_004981	chr22,chr22	+,-	KDELR3,KCNJ4	25004,1005
chr7:4167941-4169106	chr7	+	4167946	4169106	True	NM_020144,NR_027816	chr7,chr7	-,+	PAPOLB,SDK1	732569,210
chr21:38366726-38367010	chr21	+	38366824	38366996	True	NM_000411,NM_018962	chr21,chr21	-,+	HLCS,DSCR6	-4288,11866
chr21:33763512-33765012	chr21	+	33763734	33764999	True	NM_014825,NR_026845	chr21,chr21	-,+	URB1,C21orf119	363,442
chr14:103768072-103768366	chr14	+	103768119	103768281	True	NR_033938,NM_001969	chr14,chr14	-,+	LOC100131366,EIF5	-112754,32211
chr20:1459482-1461038	chr20	+	1459627	1460629	True	NM_182483,NM_014723,NM_001122962	chr20,chr20,chr20	-,+,-	NSFL1C,SNPH,SIRPB2	-11210,-212719,11654
chr20:44456446-44457934	chr20	+	44456474	44457607	True	NM_003279,NM_033421,NM_001042632,NM_001042633,NM_152897	chr20,chr20,chr20,chr20,chr20	-,+,+,+,+	TNNC2,SNX21,SNX21,SNX21,SNX21	-521,4862,4862,4862,4862
chr18:77441966-77442226	chr18	+	77441995	77442197	True	NM_001202504,NM_048368,NM_004715,NM_001146343	chr18,chr18,chr18,chr18	+,+,+,-	CTDP1,CTDP1,CTDP1,PQLC1	-616,-2245,-2245,269506
chrX:106148518-106149275	chrX	+	106148517	106149215	True	NM_001171706,NM_138382,NM_001171092	chrX,chrX,chrX	-,-,+	RIPPLY1,RIPPLY1,CLDN2	-1956,-1956,-5181
chr17:60005242-60006138	chr17	+	60005244	60006006	True	NR_026641,NM_020748,NM_001144933	chr17,chr17,chr17	-,-,+	INTS2,INTS2,EFCAB3	133,133,441572
chr11:44928444-44928699	chr11	+	44928444	44928698	True	NR_026681,NM_001076787	chr11,chr11	+,-	LOC221122,TP53I11	66754,43960
chr1:210406521-210406791	chr1	+	210406583	210406759	True	NR_024337,NM_019605	chr1,chr1	-,+	C1orf133,SERTAD4	757,-439
chr5:138938934-138939873	chr5	+	138939103	138939625	True	NM_003339,NM_181838,NM_198282	chr5,chr5,chr5	+,+,-	UBE2D2,UBE2D2,TMEM173	1125,1125,-76760
chr11:68606956-68607255	chr11	+	68606990	68607212	True	NM_001031847,NM_002180,NM_001876	chr11,chr11,chr11	-,+,-	CPT1A,IGHMBP2,CPT1A	2237,64106,2237
chr18:44544697-44545667	chr18	+	44544943	44545503	True	NM_145653,NM_001100817,NM_031303	chr18,chr18,chr18	-,-,+	TCEB3C,TCEB3CL,KATNAL2	5081,-572,-18210
chr18:44544697-44545667	chr18	+	44550870	44551430	False	NM_145653,NM_001100817,NM_031303	chr18,chr18,chr18	-,-,+	TCEB3C,TCEB3CL,KATNAL2	-336,-572,-24137
chr18:44544697-44545667	chr18	+	44556785	44557345	False	NM_145653,NM_001100817,NM_016427,NM_031303	chr18,chr18,chr18,chr18	-,-,-,+	TCEB3C,TCEB3CL,TCEB3B,KATNAL2	-336,-572,4693,-30052
chr1:19972971-19974324	chr1	+	19973037	19974145	True	NM_001204085,NM_001204084,NM_181719,NM_001204086,NM_182744,NM_005380	chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,+,+,+	NBL1,NBL1,TMCO4,NBL1,NBL1,NBL1	-1222,-2880,152315,-828,-3365,-2281
chr20:3663236-3663741	chr20	+	3663256	3663452	True	NM_153202,NM_001197327,NM_025220	chr20,chr20,chr20	-,+,-	ADAM33,HSPA12B,ADAM33	-518,49864,-518
chr5:19934139-19935221	chr5	+	19934187	19935245	True	NM_001167667,NR_027027	chr5,chr5	-,+	CDH18,GUSBP1	53158,1524343
chr3:126423653-126423934	chr3	+	126423720	126423982	True	NM_032343,NM_052883	chr3,chr3	+,-	CHCHD6,TXNRD3	-653,-49753
chr10:12085954-12086262	chr10	+	12085961	12086193	True	NM_018706,NM_080599,NM_015542	chr10,chr10,chr10	+,-,-	DHTKD1,UPF2,UPF2	24740,-938,-1153
chr12:122065870-122066310	chr12	+	122065870	122066274	True	NM_173855,NM_032790	chr12,chr12	-,+	MORN3,ORAI1	41336,-1466
chr12:111127344-111127566	chr12	+	111127421	111127539	True	NM_001040107,NM_032369,NM_001173975	chr12,chr12,chr12	-,-,+	HVCN1,HVCN1,TCTN1	128,-475,-75560
chr6:153450738-153450997	chr6	+	153450755	153450938	True	NM_194435,NM_012419	chr6,chr6	+,-	VIP,RGS17	-378879,1512
chr1:249150035-249151611	chr1	+	249150378	249151492	True	NM_001193328,NM_001136036,NM_024836	chr1,chr1,chr1	-,-,+	ZNF692,ZNF692,ZNF672	1873,1683,-17899
chr3:46621541-46623089	chr3	+	46621668	46622634	True	NM_003212,NM_024512,NM_001174136	chr3,chr3,chr3	+,-,+	TDGF1,LRRC2,TDGF1	-2643,-13657,-5674
chr9:116322874-116323161	chr9	+	116322888	116323056	True	NM_017443,NM_134427	chr9,chr9	-,+	POLE3,RGS3	-149859,4304
chr21:34145060-34146182	chr21	+	34145065	34145968	True	NM_013329,NR_027873,NM_016631,NR_024622,NR_024623	chr21,chr21,chr21,chr21,chr21	-,-,-,+,+	GCFC1,GCFC1,GCFC1,C21orf49,C21orf49	-896,-896,-896,-705,-705
chr16:2023726-2024835	chr16	+	2023839	2024855	True	NR_003142,NM_174903,NM_005262,NM_144603,NM_002952,NM_172167,NM_006453,NM_172168,NR_003020	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,-,-,-,+,-,+	SNHG9,RNF151,GFER,NOXO1,RPS2,NOXO1,TBL3,NOXO1,SNORA78	-8893,-7015,9294,6635,-9012,6379,-1826,6379,-8705
chr10:81205763-81206178	chr10	+	81205790	81206134	True	NM_001099692,NM_153367	chr10,chr10	+,-	EIF5AL1,ZCCHC24	66222,-407
chr9:113798879-113799294	chr9	+	113798941	113799316	True	NM_057159,NM_001401,NM_005592	chr9,chr9,chr9	-,-,+	LPAR1,LPAR1,MUSK	1099,1099,-367941
chr5:759170-759474	chr5	+	759204	759406	True	NM_001166260,NM_007030	chr5,chr5	+,-	TRIP13,TPPP	133562,-65694
chr2:242041958-242042219	chr2	+	242041996	242042182	True	NR_028049,NM_182501,NM_002712,NR_028051,NR_028050	chr2,chr2,chr2,chr2,chr2	-,-,+,-,-	MTERFD2,MTERFD2,PPP1R7,MTERFD2,MTERFD2	-249,-249,47719,-249,-249
chr20:25175175-25175394	chr20	+	25175198	25175300	True	NR_027091,NM_001114089,NM_001247	chr20,chr20,chr20	-,+,+	LOC284798,ENTPD6,ENTPD6	-45772,1038,1038
chr12:50093073-50094097	chr12	+	50093171	50093786	True	NM_198900,NM_175736,NM_003217	chr12,chr12,chr12	-,-,+	FMNL3,FMNL3,TMBIM6	7466,7466,41506
chr2:38304476-38305083	chr2	+	38304515	38304912	True	NR_027252,NM_000104	chr2,chr2	+,-	C2orf58,CYP1B1	53334,-1192
chrY:9748698-9749341	chrY	+	9748783	9749334	True	NR_001540,NR_003593,NR_003589	chrY,chrY,chrY	+,+,-	TTTY23,TTTY23B,TTTY1B	-427,-427,-136855
chrY:9748698-9749341	chrY	-	6110723	6111274	False	NM_022573,NR_001540,NR_003593	chrY,chrY,chrY	+,-,-	TSPY2,TTTY23,TTTY23B	2989,427,427
chr1:51423317-51424067	chr1	+	51423364	51424084	True	NM_001262,NM_007051	chr1,chr1	+,-	CDKN2C,FAF1	10282,1902
chr14:24730943-24731229	chr14	+	24730962	24731214	True	NM_000359,NM_004581,NM_016576,NM_182836	chr14,chr14,chr14,chr14	-,-,+,-	TGM1,RABGGTA,GMPR2,RABGGTA	1252,9579,-28910,9639
chr1:109959649-109960094	chr1	+	109959751	109960102	True	NM_001199774,NM_002790,NM_001040709,NM_001199772,NM_001199773	chr1,chr1,chr1,chr1,chr1	-,-,+,-,-	PSMA5,PSMA5,SYPL2,PSMA5,PSMA5	9059,9021,48997,9021,9032
chr7:99717542-99717757	chr7	+	99717546	99717806	True	NM_139315,NM_152755,NM_001190415,NR_033792,NM_203397,NM_005641	chr7,chr7,chr7,chr7,chr7,chr7	-,+,-,-,+,-	TAF6,CNPY4,TAF6,TAF6,MBLAC1,TAF6	-525,-332,-65,-551,6513,-551
chr17:27040046-27040521	chr17	+	27040070	27040374	True	NR_024575,NR_024579,NM_000984,NM_152465,NM_001144943,NR_000013,NR_000010,NM_001142625,NM_001144942,NM_001142624,NM_031934	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,-,-,+,+,-,-,-,-	RAB34,RAB34,RPL23A,PROCA1,RAB34,SNORD42B,SNORD4A,RAB34,RAB34,RAB34,RAB34	4927,4927,6625,-1198,4962,7193,9225,4962,4584,4962,4584
chr6:107435224-107435497	chr6	+	107435224	107435450	True	NM_001080450,NM_016487	chr6,chr6	-,+	BEND3,C6orf203	236,-85868
chr3:183995016-183995851	chr3	+	183995046	183995798	True	NM_033259,NM_001100121,NM_001100120,NM_001037324	chr3,chr3,chr3,chr3	-,+,+,+	CAMK2N2,ECE2,ECE2,ECE2	-15795,-1298,-1298,-1298
chr8:41910364-41911351	chr8	+	41910391	41911203	True	NM_001134296,NM_001099412,NM_001099413,NM_006766	chr8,chr8,chr8,chr8	+,-,-,-	AP3M2,MYST3,MYST3,MYST3	99260,-886,-886,-886
chr22:43047616-43048605	chr22	+	43048184	43048441	True	NM_001171660,NM_001171661,NM_001129819,NM_007326,NR_029422,NM_000398	chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,+,-	CYB5R3,CYB5R3,CYB5R3,CYB5R3,RNU12,CYB5R3	-7544,-5189,-5189,-5189,-36984,-2779
chr2:128284635-128285698	chr2	+	128284715	128285539	True	NM_017969,NM_001080527	chr2,chr2	-,+	IWS1,MYO7B	-628,7838
chr22:33395425-33396257	chr22	+	33395874	33396280	True	NM_003490,NM_000362,NM_133633	chr22,chr22,chr22	-,+,-	SYN3,TIMP3,SYN3	6576,-199123,6576
chr15:61521713-61522451	chr15	+	61521861	61522469	True	NM_134261,NM_207322	chr15,chr15	-,+	RORA,C2CD4A	-359,836706
chr6:143831698-143832395	chr6	+	143831954	143832426	True	NM_032020,NM_003630	chr6,chr6	-,+	FUCA2,PEX3	644,-60088
chr13:35517166-35517380	chr13	+	35517166	35517404	True	NM_005584,NM_015678	chr13,chr13	-,+	MAB21L1,NBEA	533478,-793
chrX:99663204-99663427	chrX	+	99663209	99663421	True	NM_001105243,NM_001184880,NM_022144,NM_020766	chrX,chrX,chrX,chrX	-,-,+,-	PCDH19,PCDH19,TNMD,PCDH19	1900,1900,176368,1900
chr22:24408057-24409301	chr22	+	24408111	24409143	True	NR_003082,NM_012295,NM_001199281,NM_001201429	chr22,chr22,chr22,chr22	-,+,+,+	GSTTP2,CABIN1,CABIN1,CABIN1	-6212,-397,-342,-397
chr14:74035342-74036036	chr14	+	74035439	74036023	True	NM_203309,NM_006821	chr14,chr14	-,+	HEATR4,ACOT2	-9788,-16
chr7:767778-769116	chr7	+	767883	768565	True	NM_017802,NM_001164760,NM_001164758,NM_001164759	chr7,chr7,chr7,chr7	+,-,-,-	HEATR2,PRKAR1B,PRKAR1B,PRKAR1B	-1596,-905,-570,-570
chr8:143751440-143751664	chr8	+	143751442	143751544	True	NR_033343,NM_003724,NM_001077527	chr8,chr8,chr8	+,-,-	PSCA,JRK,JRK	181,-41,-41
chr3:49206937-49207706	chr3	+	49207103	49207745	True	NM_173546,NM_022903	chr3,chr3	+,-	KLHDC8B,CCDC71	1272,-3318
chr19:45149488-45150378	chr19	+	45149575	45150294	True	NM_006505,NM_001135770,NM_001135769,NM_001135768,NR_027754	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	PVR,PVR,PVR,PVR,CEACAM22P	-2528,-2528,-2528,-2528,-89425
chr9:131591259-131591761	chr9	+	131591344	131591788	True	NM_016390,NM_004435	chr9,chr9	-,+	C9orf114,ENDOG	347,-10616
chr5:131755649-131756774	chr5	+	131755792	131756790	True	NM_001013717,NR_037898	chr5,chr5	+,-	C5orf56,LOC553103	-9170,-50184
chr3:38035740-38035946	chr3	+	38035779	38035967	True	NM_015873,NM_001130964	chr3,chr3	+,-	VILL,PLCD1	-752,30361
chr9:130966577-130967422	chr9	+	130966648	130967332	True	NM_012127,NM_004408,NM_001005336,NM_001131015	chr9,chr9,chr9,chr9	-,+,+,-	CIZ1,DNM1,DNM1,CIZ1	14,-1036,-1036,14
chr12:121735188-121735814	chr12	+	121735238	121735646	True	NM_002560,NM_153500,NM_153499,NM_172214,NM_172215,NM_172216,NM_006549,NM_172226	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,-,-,-,-,-,-,-	P2RX4,CAMKK2,CAMKK2,CAMKK2,CAMKK2,CAMKK2,CAMKK2,CAMKK2	-87632,515,515,515,515,515,515,-682
chr11:72980608-72980864	chr11	+	72980621	72980747	True	NM_014824,NM_176797,NM_176796,NM_176798,NM_004154	chr11,chr11,chr11,chr11,chr11	-,+,+,+,+	FCHSD2,P2RY6,P2RY6,P2RY6,P2RY6	-127478,-5102,-5102,191,2499
chr12:132414876-132415794	chr12	+	132414939	132415638	True	NM_175066,NM_001002020,NM_025215,NM_001002019	chr12,chr12,chr12,chr12	-,+,+,+	DDX51,PUS1,PUS1,PUS1	213303,-1245,-1177,-1192
chr12:53444180-53444697	chr12	+	53444209	53444579	True	NM_198316,NM_170754,NM_015319,NR_033854	chr12,chr12,chr12,chr12	+,+,+,-	TENC1,TENC1,TENC1,LOC283335	-3450,-425,-1527,3693
chr1:32401962-32402507	chr1	+	32402030	32402520	True	NM_006559,NM_080391	chr1,chr1	+,-	KHDRBS1,PTP4A2	76970,1518
chr3:141722134-141723280	chr3	+	141722512	141723036	True	NM_001178140,NM_001679	chr3,chr3	-,+	TFDP2,ATP1B3	-3283,-127093
chr11:10676910-10677914	chr11	+	10677027	10677899	True	NM_014633,NM_001098579	chr11,chr11	+,-	CTR9,MRVI1	94911,-3179
chr6:154403056-154404222	chr6	+	154403065	154404248	True	NM_001130699,NM_001145287	chr6,chr6	-,+	IPCEF1,OPRM1	247026,3393
chr3:39425052-39425335	chr3	+	39425053	39425299	True	NM_001171174,NM_017875	chr3,chr3	-,+	CX3CR1,SLC25A38	-101827,-289
chr8:678125-678411	chr8	+	678138	678448	True	NM_207332,NM_183421	chr8,chr8	-,+	ERICH1,FBXO25	2828,-321381
chr1:6549450-6549698	chr1	+	6549537	6549597	True	NM_001042665,NM_001042664,NM_020631,NM_001042663,NM_031475	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	PLEKHG5,PLEKHG5,PLEKHG5,PLEKHG5,ESPN	-3523,1093,2213,7937,-64740
chr6:79773425-79774104	chr6	+	79773528	79773978	True	NM_001010844,NM_017934	chr6,chr6	+,-	IRAK1BP1,PHIP	-196397,14083
chr10:96304652-96305596	chr10	+	96304870	96305467	True	NM_022451,NM_018063	chr10,chr10	-,+	NOC3L,HELLS	-182187,106
chr12:88973582-88973865	chr12	+	88973655	88973797	True	NM_003994,NM_000899,NM_181783	chr12,chr12,chr12	-,-,+	KITLG,KITLG,TMTC3	503,503,-437633
chr11:57313000-57313458	chr11	+	57313098	57313374	True	NM_012456,NM_001105565	chr11,chr11	-,+	TIMM10,SMTNL1	-14866,-3035
chr19:57682086-57683118	chr19	+	57682162	57683147	True	NM_001012729,NM_003417	chr19,chr19	-,+	DUXA,ZNF264	-3306,19720
chr14:106384028-106384454	chr14	+	106384091	106384217	True	NR_002224,NR_026800	chr14,chr14	-,+	ADAM6,KIAA0125	54191,-304
chr3:123703698-123704713	chr3	+	123703751	123704117	True	NR_028136,NM_017578	chr3,chr3	+,-	KALRN,ROPN1	109440,6132
chr10:5708785-5709222	chr10	+	5708784	5709242	True	NM_024701,NR_024581,NM_017782,NR_037164	chr10,chr10,chr10,chr10	-,-,+,-	ASB13,ASB13,C10orf18,ASB13	-226,-226,17558,-226
chr15:56536247-56536680	chr15	+	56536512	56536583	True	NM_022841,NM_198524	chr15,chr15	-,+	RFX7,TEX9	-1029,121060
chr14:69956001-69956742	chr14	+	69956353	69956471	True	NM_001161498,NR_024630	chr14,chr14	+,-	UPF0639,C14orf162	-4933,81497
chr4:9644539-9646048	chr4	+	9644929	9645511	True	NR_031688,NM_000798	chr4,chr4	-,+	MIR548I2,DRD5	-86992,137746
chr3:125683300-125683992	chr3	+	125683708	125684038	True	NM_001012337,NM_001195223	chr3,chr3	+,-	ROPN1B,ALG1L	3989,-27821
chrX:77152411-77153712	chrX	+	77152702	77153497	True	NM_001866,NM_032121	chrX,chrX	+,-	COX7B,MAGT1	1463,-1637
chr2:242715413-242716017	chr2	+	242715534	242715902	True	NM_005018,NM_022134	chr2,chr2	-,+	PDCD1,GAL3ST2	85206,337
chr3:36810415-36810629	chr3	+	36810528	36810678	True	NM_000249,NM_033403	chr3,chr3	+,-	MLH1,DCLK3	224162,-29176
chr7:74350211-74350806	chr7	+	74350330	74350456	True	NM_001025202,NM_001145063	chr7,chr7	-,+	STAG3L2,GATSL1	-43599,28626
chr7:74350211-74350806	chr7	-	74895889	74895945	False	NM_001145064,NR_003664	chr7,chr7	-,+	GATSL2,SPDYE8P	-28548,40587
chr2:86114909-86115186	chr2	+	86115043	86115169	True	NM_003896,NM_032827	chr2,chr2	-,+	ST3GAL5,ATOH8	1038,-134192
chr14:101291542-101291854	chr14	+	101291655	101291865	True	NR_003531,NR_003530,NR_033360,NR_002766,NR_033358,NR_033359,NM_001134888	chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,+,+,+,-	MEG3,MEG3,MEG3,MEG3,MEG3,MEG3,RTL1	579,579,579,579,579,579,59369
chr7:35733539-35734009	chr7	+	35733617	35733927	True	NM_022373,NM_001011553	chr7,chr7	-,+	HERPUD2,SEPT7	895,106699
chrY:3548760-3549673	chrY	+	3548952	3549671	True	NM_003140,NM_139214	chrY,chrY	-,+	SRY,TGIF2LY	-893160,-101879
chrY:3548760-3549673	chrX	+	89366470	89366526	False	NM_138960,NM_004538	chrX,chrX	+,-	TGIF2LX,NAP1L3	-189581,3562206
chr2:18767579-18768158	chr2	+	18767583	18768022	True	NM_033253,NM_002252,NM_001199088,NM_001002006,NM_001199086,NM_001199087,NM_001199104,NM_001199103	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	-,+,-,-,-,-,-,-	NT5C1B,KCNS3,NT5C1B,NT5C1B,NT5C1B,NT5C1B,NT5C1B-RDH14,NT5C1B-RDH14	2877,-707689,2877,2877,2877,2877,2877,2877
chr22:39882271-39883395	chr22	+	39882435	39883402	True	NM_001098270,NM_194326	chr22,chr22	+,-	MGAT3,RPS19BP1	-174,45508
chr5:6340172-6341534	chr5	+	6340333	6341477	True	NM_001145161,NR_028351	chr5,chr5	+,-	UBE2QL1,FLJ33360	107258,-2928
chr15:78426795-78427432	chr15	+	78426835	78427342	True	NM_006383,NM_005530	chr15,chr15	-,+	CIB2,IDH3A	-2957,14376
chr12:98984725-98985351	chr12	+	98984789	98985268	True	NM_005888,NR_003015,NM_002635,NM_213611,NM_201612	chr12,chr12,chr12,chr12,chr12	+,+,+,+,-	SLC25A3,SNORA53,SLC25A3,SLC25A3,IKBIP	2134,8144,2134,2134,53372
chr14:21566050-21566322	chr14	+	21566105	21566336	True	NM_016423,NM_001101672,NM_001146683,NM_001102454	chr14,chr14,chr14,chr14	-,-,+,-	ZNF219,ZNF219,C14orf176,ZNF219	522,887,759,6577
chr11:85564410-85566035	chr11	+	85564770	85565947	True	NM_032943,NM_173556	chr11,chr11	-,+	SYTL2,CCDC83	-42592,196
chr19:38269739-38270085	chr19	+	38269754	38270068	True	NM_001172689,NM_001172690,NM_001172691,NM_001172692,NM_015073,NM_152360	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,+,-	ZNF573,ZNF573,ZNF573,ZNF573,SIPA1L3,ZNF573	212,212,212,212,127799,212
chr22:44568723-44568939	chr22	+	44568728	44568903	True	NR_024426,NR_024427,NM_022141,NM_001099294,NM_001137605,NM_001137606,NR_024428	chr22,chr22,chr22,chr22,chr22,chr22,chr22	+,+,+,-,+,+,+	PARVG,PARVG,PARVG,KIAA1644,PARVG,PARVG,PARVG	7866,-9,7866,139879,-9,8353,8312
chr17:80409837-80410806	chr17	+	80409944	80410510	True	NM_012336,NM_001193655,NM_001193654,NM_001193657,NM_031968,NM_001193653,NM_001083608,NM_001033046,NM_001100408,NR_036514,NR_036517,NR_036516,NR_036519,NR_036518,NM_001038618,NM_001100407	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,-,+,-,+,-,-,-,-,-,-,-,+,-	NARF,C17orf62,C17orf62,C17orf62,NARF,C17orf62,NARF,C17orf62,C17orf62,C17orf62,C17orf62,C17orf62,C17orf62,C17orf62,NARF,C17orf62	6029,-2342,-1237,-1237,6029,-1237,6029,-1237,-1237,-1237,-1237,-1237,-1237,-1237,5549,-1237
chr14:41114424-41114948	chr14	+	41114454	41114987	True	NM_152447,NM_203301	chr14,chr14	+,-	LRFN5,FBXO33	961776,-1212750
chr5:176829749-176829966	chr5	+	176829751	176829975	True	NM_001029886,NM_000505,NM_003052	chr5,chr5,chr5	-,-,+	PFN3,F12,SLC34A1	-2114,6652,-18370
chr14:104607315-104607565	chr14	+	104607464	104607614	True	NM_004894,NM_015656	chr14,chr14	-,+	C14orf2,KIF26A	-219561,-2455
chr17:31258076-31258516	chr17	+	31258319	31258529	True	NM_001033504,NM_015544,NM_015194	chr17,chr17,chr17	+,+,-	TMEM98,TMEM98,MYO1D	-3442,-3442,-54417
chr6:168843277-168843491	chr6	+	168843319	168843491	True	NM_214462,NM_001166412,NM_022138	chr6,chr6,chr6	-,+,+	DACT2,SMOC2,SMOC2	-122917,-1547,-1547
chr12:120763867-120764236	chr12	+	120763929	120763989	True	NM_000928,NM_012240	chr12,chr12	-,+	PLA2G1B,SIRT4	1653,-23856
chr5:139721548-139722233	chr5	+	139721563	139722177	True	NM_001945,NM_031467	chr5,chr5	-,+	HBEGF,SLC4A9	4061,17609
chr17:38137458-38138123	chr17	+	38137733	38138136	True	NM_139280,NM_002809	chr17,chr17	-,+	ORMDL3,PSMD3	-53849,-726
chr17:35730115-35731522	chr17	+	35730517	35731570	True	NM_198836,NM_173625	chr17,chr17	-,+	ACACA,C17orf78	-14458,1414
chr20:32035653-32037293	chr20	+	32036397	32036595	True	NM_003098,NM_001032999	chr20,chr20	-,+	SNTA1,CBFA2T2	-4699,41332
chr2:237990385-237990891	chr2	+	237990495	237990804	True	NM_004369,NM_006710,NM_198189	chr2,chr2,chr2	-,+,+	COL6A3,COPS8,COPS8	332103,3279,3279
chr10:30632627-30633840	chr10	+	30632805	30633614	True	NM_018109,NM_005204	chr10,chr10	-,+	MTPAP,MAP3K8	4712,89251
chr5:161556644-161557512	chr5	+	161556987	161557533	True	NM_198904,NM_021911	chr5,chr5	+,-	GABRG2,GABRB2	-62390,-581857
chr11:67770428-67770787	chr11	+	67770506	67770754	True	NM_030930,NM_001030010,NM_000694,NM_001161473	chr11,chr11,chr11,chr11	-,+,+,+	UNC93B1,ALDH3B1,ALDH3B1,ALDH3B1	889,7035,7035,5293
chr8:22852841-22853548	chr8	+	22852853	22853429	True	NM_015178,NM_001160037,NM_001160036,NM_144962	chr8,chr8,chr8,chr8	+,+,+,-	RHOBTB2,RHOBTB2,RHOBTB2,PEBP4	3662,-69,-7985,-67432
chr17:1931632-1931953	chr17	+	1931727	1931859	True	NM_178568,NM_001383	chr17,chr17	-,+	RTN4RL1,DPH1	-3549,1571
chr19:34007977-34008795	chr19	+	34008076	34008598	True	NM_001166057,NM_000285,NM_001166056,NM_001127895	chr19,chr19,chr19,chr19	-,-,-,+	PEPD,PEPD,PEPD,CHST8	4251,4251,4251,104262
chr22:21320990-21321357	chr22	+	21320992	21321400	True	NM_001018060,NM_001008695,NR_027464,NM_001146288,NM_144704	chr22,chr22,chr22,chr22,chr22	+,-,+,+,+	AIFM3,THAP7,AIFM3,AIFM3,AIFM3	-1625,35054,46,46,-1625
chr11:28116101-28116560	chr11	+	28116152	28116549	True	NM_031217,NM_001113528	chr11,chr11	-,+	KIF18A,METTL15	13254,13248
chr4:669508-670345	chr4	+	669605	670255	True	NM_002477,NM_007100,NR_033743	chr4,chr4,chr4	+,-,-	MYL5,ATP5I,ATP5I	1455,-1478,-1478
chr1:46152416-46152683	chr1	+	46152480	46152719	True	NM_021639,NM_016486	chr1,chr1	-,+	GPBP1L1,TMEM69	-178,1127
chr8:145025432-145025758	chr8	+	145025654	145025734	True	NM_000837,NR_030383,NM_201379,NM_201381,NM_201380,NM_201383,NM_201382	chr8,chr8,chr8,chr8,chr8,chr8,chr8	+,-,-,-,-,-,-	GRINA,MIR661,PLEC,PLEC,PLEC,PLEC,PLEC	38491,-6207,2404,-6749,-610,-8962,-7544
chr5:6864959-6866880	chr5	+	6865113	6866545	True	NM_001171806,NR_036242	chr5,chr5	+,-	PAPD7,MIR4278	-119070,-37079
chr16:4355860-4356530	chr16	+	4356129	4356463	True	NM_032575,NM_003223	chr16,chr16	+,-	GLIS2,TFAP4	25761,-33128
chr8:145139701-145139997	chr8	+	145139706	145139982	True	NM_030974,NM_001916,NM_019037,NM_003801	chr8,chr8,chr8,chr8	-,+,+,+	SHARPIN,CYC1,EXOSC4,GPAA1	19208,9977,-6235,-2233
chr2:109398729-109399583	chr2	+	109398823	109399389	True	NM_144978,NM_022336	chr2,chr2	+,-	CCDC138,EDAR	3829,206499
chr1:4054734-4055090	chr1	+	4054882	4055082	True	NR_024455,NM_207356	chr1,chr1	+,-	LOC100133612,C1orf174	-237965,-238025
chr6:109759882-109760650	chr6	+	109760132	109760502	True	NM_173672,NM_003080,NM_001111298	chr6,chr6,chr6	-,+,-	PPIL6,SMPD2,PPIL6	1922,1428,1922
chr3:150971088-150972571	chr3	+	150971235	150972608	True	NM_053002,NM_001081455	chr3,chr3	+,-	MED12L,P2RY14	-166610,-4237
chr12:125476736-125477594	chr12	+	125477271	125477613	True	NM_032656,NM_080626	chr12,chr12	-,+	DHX37,BRI3BP	-3604,580
chr20:48748663-48750270	chr20	+	48748771	48750307	True	NM_005194,NM_199144	chr20,chr20	+,-	CEBPB,UBE2V1	57068,-16277
chr1:11107080-11107534	chr1	+	11107289	11107491	True	NM_006610,NM_007375,NM_139208	chr1,chr1,chr1	-,+,-	MASP2,TARDBP,MASP2	3,-34661,3
chr4:25310095-25310454	chr4	+	25310164	25310394	True	NM_024936,NM_016955	chr4,chr4	+,-	ZCCHC4,SEPSECS	4001,-147960
chr2:25141946-25142183	chr2	+	25142011	25142161	True	NR_034113,NM_004036	chr2,chr2	+,-	LOC729723,ADCY3	52819,18
chr8:6570622-6571165	chr8	+	6570802	6571136	True	NM_018361,NM_207411	chr8,chr8	+,-	AGPAT5,XKR5	-4981,122080
chr14:94527314-94528159	chr14	+	94527321	94528068	True	NM_020414,NM_145249	chr14,chr14	-,+	DDX24,IFI27L1	19541,19570
chr7:66207060-66207433	chr7	+	66207143	66207481	True	NR_003934,NM_014504	chr7,chr7	-,+	LOC729156,RABGEF1	102382,-1557
chr7:66207060-66207433	chr7	-	66055975	66056037	False	NM_001167961,NR_002933	chr7,chr7	+,-	KCTD7,LOC493754	37830,-12477
chr20:45281327-45283327	chr20	+	45281385	45283068	True	NM_022829,NM_030777,NM_001193342,NM_001193339	chr20,chr20,chr20,chr20	-,+,-,-	SLC13A3,SLC2A10,SLC13A3,SLC13A3	-1285,55210,-1285,-1285
chr17:20798654-20798906	chr17	+	20798681	20798880	True	NM_001004306,NM_015510	chr17,chr17	-,+	CCDC144NL,DHRS7B	632,231377
chr9:46278686-46279786	chr4	-	3537930	3537980	True	NM_002337,NM_173660	chr4,chr4	-,+	LRPAP1,DOK7	-3706,-72948
chr9:46278686-46279786	chr9	+	46278838	46279789	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2648108,407776
chr9:46278686-46279786	chr9	+	67688415	67688465	False	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	105774,238295
chr9:46278686-46279786	chr9	-	45103735	45103785	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-113550,-1473005
chr2:87087315-87087876	chr2	+	87087562	87087834	True	NR_037931,NM_172101,NM_172102,NM_001178100,NM_172213,NM_004931	chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-	LOC100286979,CD8B,CD8B,CD8B,CD8B,CD8B	1113,1263,1263,1263,1263,1263
chr3:183603308-183604549	chr3	+	183603675	183604231	True	NM_182537,NM_018622,NM_001037639	chr3,chr3,chr3	+,-,-	HTR3D,PARL,PARL	145100,-982,-982
chr9:138797063-138797635	chr9	+	138797067	138797583	True	NM_015447,NM_020822	chr9,chr9	-,+	CAMSAP1,KCNT1	1480,-203093
chrX:30250248-30250453	chrX	+	30250281	30250477	True	NM_000475,NM_002365,NM_002367	chrX,chrX,chrX	-,+,+	NR0B1,MAGEB3,MAGEB4	77068,-1779,9579
chr3:179368495-179370463	chr3	+	179368943	179370356	True	NM_177988,NM_003940	chr3,chr3	-,+	MRPL47,USP13	-46509,576
chr5:34196923-34197906	chr5	+	34197532	34197953	True	NM_016568,NR_037951	chr5,chr5	+,-	RXFP3,C1QTNF3-AMACR	-261096,-72899
chrX:133948447-133950441	chrX	+	133948835	133950300	True	NM_001170757,NM_001170781,NM_001170782,NM_001170783,NM_001170779,NM_138819,NM_001170784	chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,+,+	FAM122B,FAM122C,FAM122C,FAM122C,FAM122C,FAM122C,FAM122C	-17573,-7670,-7688,-7670,-7670,-7670,-7688
chr20:45339791-45340071	chr20	+	45339807	45340095	True	NM_030777,NM_033550	chr20,chr20	+,-	SLC2A10,TP53RK	-1579,-21531
chr2:228010085-228010651	chr2	+	228010242	228010690	True	NM_000091,NM_000092	chr2,chr2	+,-	COL4A3,COL4A4	18590,18639
chr19:19648418-19649096	chr19	+	19648433	19649117	True	NM_032037,NM_153221,NM_001190328,NM_198537	chr19,chr19,chr19,chr19	-,+,+,+	TSSK6,CILP2,YJEFN3,YJEFN3	-21964,-44,-8814,-8814
chr17:40437957-40438509	chr17	+	40438317	40438533	True	NM_012448,NM_003152	chr17,chr17	-,+	STAT5B,STAT5A	-9893,1031
chr11:118022921-118023196	chr11	+	118022923	118023239	True	NR_024527,NM_001142349,NM_001142348,NM_019894,NM_174934	chr11,chr11,chr11,chr11,chr11	-,-,-,+,-	SCN4B,SCN4B,SCN4B,TMPRSS4,SCN4B	-6739,-6739,441,-75247,441
chr16:89628011-89628228	chr17	-	17287001	17287051	True	NM_003653,NM_020201	chr17,chr17	-,+	COPS3,NT5M	-102384,-80372
chr1:63152152-63152744	chr1	+	63152248	63152424	True	NM_033407,NM_014495	chr1,chr1	-,+	DOCK7,ANGPTL3	1595,-89119
chr14:19551165-19551902	chr22	-	16289787	16289837	True	NR_001591,NM_001136213	chr22,chr22	+,-	psiTPTE22,POTEH	792963,-1850
chr14:19551165-19551902	chr14	+	19551404	19551668	False	NM_001145442,NR_027480,NM_001005356	chr14,chr14,chr14	-,+,+	POTEM,POTEG,POTEG	468654,1696,1696
chr6:3451472-3452053	chr6	+	3451723	3452054	True	NM_021945,NM_015482,NM_001128592	chr6,chr6,chr6	-,-,+	SLC22A23,SLC22A23,PSMG4	-6505,4793,-192612
chr1:94136842-94138278	chr1	+	94137002	94138200	True	NR_034091,NM_003567	chr1,chr1	+,-	LOC100129046,BCAR3	-79528,9235
chr11:101781063-101782287	chr11	+	101781431	101781803	True	NM_020802,NM_178127	chr11,chr11	+,-	KIAA1377,ANGPTL5	3942,5508
chr1:220376257-220378100	chr1	+	220376313	220377469	True	NM_018060,NR_002994,NR_031705	chr1,chr1,chr1	+,-,-	IARS2,SNORA36B,MIR664	-108921,-2295,-2352
chr19:33361899-33362206	chr19	+	33361920	33362228	True	NM_014270,NM_001126335,NM_152266	chr19,chr19,chr19	-,-,+	SLC7A9,SLC7A9,C19orf40	-1237,-1237,100919
chr18:44495062-44496254	chr18	+	44495061	44496168	True	NM_173206,NM_004671,NM_031303	chr18,chr18,chr18	-,-,+	PIAS2,PIAS2,KATNAL2	1348,1348,30618
chr5:175787726-175788232	chr5	+	175787882	175788246	True	NM_173664,NM_001079685,NM_001079684,NM_020444	chr5,chr5,chr5,chr5	+,-,-,-	ARL10,KIAA1191,KIAA1191,KIAA1191	4255,613,613,613
chr1:201923236-201923551	chr1	+	201923300	201923400	True	NM_006335,NM_012134	chr1,chr1	+,-	TIMM17A,LMOD1	1218,-7584
chr15:35840496-35842202	chr15	+	35840663	35842239	True	NM_080650,NM_001141972,NR_003144	chr15,chr15,chr15	-,-,+	ATPBD4,ATPBD4,LOC723972	-2259,-2259,-311188
chr5:137547274-137548098	chr5	+	137547515	137547999	True	NM_005733,NM_004661	chr5,chr5	+,-	KIF20A,CDC23	-33149,1095
chr6:53224033-53224373	chr6	+	53224090	53224412	True	NM_012347,NM_021814	chr6,chr6	+,-	FBXO9,ELOVL5	-288370,-10148
chr3:150997686-150999120	chr3	+	150997942	150998758	True	NM_053002,NM_014879	chr3,chr3	+,-	MED12L,P2RY14	-193317,-1712
chr17:35294245-35294577	chr17	+	35294347	35294607	True	NM_198837,NM_005568	chr17,chr17	-,+	ACACA,LHX1	362135,164
chr1:223310257-223311390	chr1	+	223310450	223311268	True	NM_003268,NM_152610	chr1,chr1	-,+	TLR5,C1orf65	5406,255446
chr7:98866587-98867587	chr7	+	98866766	98867386	True	NM_001145715,NR_002147	chr7,chr7	-,+	KPNA7,MYH16	-61677,3537
chr8:144678617-144679253	chr8	+	144678799	144679147	True	NM_001130053,NM_032378,NM_001130055,NM_001130056,NM_001130057,NM_032862,NM_001960,NM_001195203	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,-,+,-,-	EEF1D,EEF1D,EEF1D,EEF1D,EEF1D,TIGD5,EEF1D,EEF1D	748,748,748,748,461,926,748,748
chr9:127959608-127960166	chr9	+	127959703	127960155	True	NM_005833,NM_001123355,NM_002721,NM_001123369,NM_001174153,NM_001174152	chr9,chr9,chr9,chr9,chr9,chr9	+,-,-,-,+,+	RABEPK,PPP6C,PPP6C,PPP6C,RABEPK,RABEPK	2706,-7485,-7485,-7485,2665,2665
chr17:7806639-7807027	chr17	+	7806639	7806979	True	NR_003000,NR_024349	chr17,chr17	+,-	SCARNA21,LOC284023	2461,12336
chr7:73185108-73185611	chr7	+	73185155	73185443	True	NM_001306,NR_026690	chr7,chr7	-,+	CLDN3,WBSCR26	-555,-35807
chrX:118604407-118605390	chrX	+	118604452	118605148	True	NM_001152,NR_028443	chrX,chrX	+,-	SLC25A5,LOC100303728	-2140,-1369
chr3:40497844-40498122	chr3	+	40497860	40497932	True	NR_033965,NM_001034996,NM_003973	chr3,chr3,chr3	-,+,+	FLJ33065,RPL14,RPL14	-146671,897,868
chr12:80327856-80328122	chr12	+	80327919	80328060	True	NM_001143885,NM_002480,NM_173591	chr12,chr12,chr12	-,-,+	PPP1R12A,PPP1R12A,OTOGL	1226,969,275172
chr9:108321307-108321819	chr9	+	108321311	108321631	True	NM_001198963,NM_006731,NM_001079802,NM_005502	chr9,chr9,chr9,chr9	+,+,+,-	FKTN,FKTN,FKTN,ABCA1	-960,-960,-960,-630784
chr14:55507384-55508287	chr14	+	55507528	55508120	True	NM_007086,NM_144578	chr14,chr14	-,+	WDHD1,MAPK1IP1L	-13709,10241
chrY:6777486-6778455	chrY	+	6777520	6778353	True	NM_001143,NM_134259,NM_134258,NM_033284	chrY,chrY,chrY,chrY	-,+,+,+	AMELY,TBL1Y,TBL1Y,TBL1Y	-35452,373,373,373
chr1:203449003-203449715	chr1	+	203449012	203449665	True	NM_002023,NM_201348,NM_002725	chr1,chr1,chr1	-,+,+	FMOD,PRELP,PRELP	-128723,-4190,-4190
chr17:42771917-42772722	chr17	+	42772194	42772703	True	NM_001099225,NM_144609,NR_036623	chr17,chr17,chr17	-,-,+	CCDC43,CCDC43,DBF4B	-5029,-5029,13272
chrX:63525488-63526723	chrX	+	63525555	63526636	True	NM_001010888,NM_130388	chrX,chrX	+,-	ZC3H12B,ASB12	1181978,-75044
chr22:29661514-29663153	chr22	+	29661688	29662986	True	NM_012265,NM_005243,NM_013986,NM_001163285,NM_001163287,NM_001163286	chr22,chr22,chr22,chr22,chr22,chr22	-,+,+,+,+,+	RHBDD3,EWSR1,EWSR1,EWSR1,EWSR1,EWSR1	978,1011,1011,1011,1011,1011
chr6:112070113-112071617	chr6	+	112070153	112071289	True	NR_034109,NM_153048	chr6,chr6	+,-	LOC643749,FYN	-265536,9049
chr4:77225947-77227025	chr4	+	77226045	77226945	True	NM_003943,NM_005506	chr4,chr4	+,-	STBD1,SCARB2	731,-90993
chr3:186502037-186503801	chr3	+	186502126	186503758	True	NR_002989,NM_001967,NR_002588,NR_031650,NM_002916,NR_002587,NR_002586	chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,-,+,+	SNORA81,EIF4A2,SNORA4,MIR1248,RFC4,SNORD2,SNORA63	705,-816,1643,702,20582,284,1329
chr7:101271280-101272004	chr7	+	101271389	101271901	True	NM_138403,NM_001202543	chr7,chr7	-,+	MYL10,CUX1	725,187282
chr1:187059805-187061445	chr1	+	187060138	187061493	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-410579,-262157
chr11:128896916-128897561	chr11	+	128897084	128897594	True	NM_000890,NM_014715	chr11,chr11	+,-	KCNJ5,ARHGAP32	-135822,-2996
chr3:49025228-49025622	chr3	+	49025326	49025554	True	NM_001009996,NM_177938,NM_177939	chr3,chr3,chr3	-,+,+	DALRD3,P4HTM,P4HTM	30513,1786,1786
chr5:750785-751138	chr5	+	750792	751126	True	NM_018140,NM_007030	chr5,chr5	+,-	CEP72,TPPP	-138438,-57282
chr5:750785-751138	chr5	+	843447	843593	False	NM_001166260,NM_024786	chr5,chr5	+,-	TRIP13,ZDHHC11	49375,7558
chr10:5009655-5011295	chr10	+	5010029	5011313	True	NM_001135241,NM_001353	chr10,chr10	-,+	AKR1C2,AKR1C1	34790,-4633
chr9:139891261-139891692	chr9	+	139891374	139891714	True	NM_004669,NM_183241	chr9,chr9	-,+	CLIC3,C9orf142	-350,-4555
chr11:67982290-67983835	chr11	+	67982532	67983884	True	NM_017635,NM_002335,NM_016028	chr11,chr11,chr11	-,+,-	SUV420H1,LRP5,SUV420H1	-1748,96223,-1748
chr14:21506762-21507257	chr14	+	21506813	21507247	True	NM_001012264,NM_173846,NM_032572	chr14,chr14,chr14	-,+,+	RNASE13,TPPP2,RNASE7	-3869,-8519,3137
chr10:116696669-116698160	chr10	+	116696894	116698058	True	NM_139169,NM_001003408	chr10,chr10	+,-	TRUB1,ABLIM1	15,-252480
chr2:219136207-219137814	chr2	+	219136365	219137696	True	NM_015488,NM_001087,NM_001077399	chr2,chr2,chr2	+,-,+	PNKD,AAMP,PNKD	-1302,-1472,-1302
chr3:195387529-195388216	chr3	+	195387786	195388234	True	NM_001647,NR_003265	chr3,chr3	-,+	APOD,SDHAP2	-76710,-2934
chr3:195387529-195388216	chr3	-	197351538	197351908	False	NR_003266,NM_001011537	chr3,chr3	-,+	LOC220729,FYTTD1	2901,124515
chr3:195387529-195388216	chr3	-	195713867	195714315	False	NR_034088,NR_003264	chr3,chr3	+,-	LOC401109,SDHAP1	155191,2892
chr12:117175067-117175672	chr12	+	117175072	117175704	True	NM_001109903,NM_032814,NM_024738	chr12,chr12,chr12	+,+,-	RNFT2,RNFT2,C12orf49	391,391,189
chr19:3558290-3559325	chr19	+	3558336	3559372	True	NM_001042680,NM_021731,NM_006339,NM_174983	chr19,chr19,chr19,chr19	-,-,+,-	C19orf28,C19orf28,HMG20B,C19orf28	-765,-765,13570,-765
chr5:76327583-76328311	chr5	+	76327762	76328008	True	NM_018046,NR_003014	chr5,chr5	+,-	AGGF1,SNORA47	-1604,48452
chr2:228197325-228198643	chr2	+	228197665	228198683	True	NM_020194,NM_024795	chr2,chr2	+,-	MFF,TM4SF20	-5490,45389
chr1:16818747-16820297	chr1	+	16819074	16820321	True	NR_023386,NM_018090	chr1,chr1	-,+	CROCCP3,NECAP2	122,-51958
chr1:101408773-101410223	chr1	+	101408938	101409982	True	NM_001439,NM_133496	chr1,chr1	-,+	EXTL2,SLC30A7	-48520,-47355
chr11:100857186-100858713	chr11	+	100857201	100858473	True	NM_032021,NM_001202474	chr11,chr11	+,-	TMEM133,PGR	4337,141371
chr5:134780435-134781184	chr5	+	134780463	134781001	True	NM_145282,NM_130848,NM_001099221	chr5,chr5,chr5	+,-,-	SLC25A48,C5orf20,TIFAB	389363,2087,7138
chr3:196297267-196297506	chr3	+	196297487	196297550	True	NM_001105573,NM_182627	chr3,chr3	+,-	FBXO45,WDR53	-1817,-2074
chr2:49454384-49454895	chr2	+	49454384	49454704	True	NM_181446,NM_006872	chr2,chr2	-,+	FSHR,GTF2A1L	-72718,-609499
chr6:106968731-106969276	chr6	+	106968740	106969296	True	NM_032730,NM_001624	chr6,chr6	-,+	RTN4IP1,AIM1	108127,-9062
chrX:149734676-149736094	chrX	+	149734993	149735963	True	NM_001184808,NM_000252	chrX,chrX	-,+	CD99L2,MTM1	331390,1083
chr18:9111720-9112639	chr18	+	9111722	9112477	True	NM_001042388,NM_021074	chr18,chr18	-,+	PPP4R1,NDUFV2	502179,-9153
chr4:113753219-113753501	chr4	+	113753488	113753552	True	NR_029857,NM_001127493	chr4,chr4	-,+	MIR302B,ANK2	-183775,-14300
chrX:9738231-9740044	chrX	+	9738530	9739646	True	NM_001649,NM_000273	chrX,chrX	+,-	SHROOM2,GPR143	14849,-4525
chr5:35618284-35619499	chr5	+	35618445	35619198	True	NM_024867,NM_001042625,NM_144722	chr5,chr5,chr5	+,-,+	SPEF2,CAPSL,SPEF2	-507,319590,-507
chr8:6875612-6875879	chr8	+	6875666	6875840	True	NM_005217,NR_036686,NR_036687,NM_001164452,NM_001042500,NM_004084	chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,+,-,-	DEFA3,DEFT1P,DEFT1P2,FAM90A14,DEFA1B,DEFA1	26,-9320,-9320,238585,33,33
chr8:6875612-6875879	chr8	+	6837499	6837631	False	NM_001042500,NM_018361,NM_004084,NR_036687,NR_036686	chr8,chr8,chr8,chr8,chr8	-,+,-,-,-	DEFA1B,AGPAT5,DEFA1,DEFT1P2,DEFT1P	33,-271677,33,9662,9662
chr8:6875612-6875879	chr8	+	6856609	6856741	False	NM_001042500,NM_004084,NM_001164452,NR_036687,NR_036686	chr8,chr8,chr8,chr8,chr8	-,-,+,-,-	DEFA1B,DEFA1,FAM90A14,DEFT1P2,DEFT1P	33,33,257684,-9366,-9366
chr15:57209395-57209755	chr15	+	57209650	57209746	True	NM_003205,NM_207038,NM_207037,NR_015419,NM_207036	chr15,chr15,chr15,chr15,chr15	+,+,+,-,+	TCF12,TCF12,TCF12,LOC145783,TCF12	1086,1086,1086,1009,1086
chrX:150344390-150344626	chrX	+	150344392	150344621	True	NR_036256,NM_134446,NM_004224	chrX,chrX,chrX	+,-,+	MIR4330,CD99L2,GPR50	-7749,-277103,434
chrX:118827782-118828119	chrX	+	118827854	118828156	True	NM_145802,NM_145799,NM_145800,NM_001105576,NM_015129	chrX,chrX,chrX,chrX,chrX	-,-,-,+,-	SEPT6,SEPT6,SEPT6,ANKRD58,SEPT6	-521,-521,-521,64419,-521
chr15:81667435-81667983	chr15	+	81667455	81667945	True	NM_001080532,NM_004513	chr15,chr15	-,+	TMC3,IL16	-1037,-78252
chr3:49849323-49849856	chr3	+	49849528	49849748	True	NM_003335,NM_203370	chr3,chr3	-,+	UBA7,C3orf54	1693,-8892
chr5:95065650-95066699	chr5	+	95065835	95066626	True	NM_031952,NM_014899	chr5,chr5	-,+	SPATA9,RHOBTB3	-47121,223
chr15:90452186-90453092	chr15	+	90452235	90452891	True	NM_182616,NM_198526,NM_001199058	chr15,chr15,chr15	-,+,-	C15orf38,ZNF710,C15orf38-AP3S2	3381,91860,3381
chr6:132834912-132835335	chr6	+	132834958	132835340	True	NM_003569,NM_175057	chr6,chr6	-,+	STX7,TAAR9	-621,24086
chr2:219247356-219247592	chr2	+	219247387	219247539	True	NM_022152,NM_000578	chr2,chr2	-,+	TMBIM1,SLC11A1	-90107,-686
chr17:63558922-63559963	chr17	+	63559166	63559937	True	NM_004655,NM_003835	chr17,chr17	-,+	AXIN2,RGS9	-1426,-425762
chr15:34517350-34517748	chr15	+	34517411	34517718	True	NM_024713,NM_016454	chr15,chr15	-,+	C15orf29,TMEM85	-15114,-217
chr22:33398483-33399537	chr22	+	33398663	33399459	True	NM_003490,NM_000362,NM_133633	chr22,chr22,chr22	-,+,-	SYN3,TIMP3,SYN3	3400,-201923,3400
chr21:45626164-45626480	chr21	+	45626383	45626517	True	NM_198155,NM_015259	chr21,chr21	+,-	C21orf33,ICOSLG	-72940,34367
chr22:50522726-50523265	chr22	+	50522883	50523153	True	NM_139202,NM_018995,NM_015166,NM_001164105,NM_001164104	chr22,chr22,chr22,chr22,chr22	-,+,-,+,+	MLC1,MOV10L1,MLC1,MOV10L1,MOV10L1	678,5281,1255,5531,5281
chr17:38299076-38300005	chr17	+	38299378	38299790	True	NM_021724,NM_007359	chr17,chr17	-,+	NR1D1,CASC3	-42405,-2931
chr15:55705433-55705676	chr15	+	55705604	55705694	True	NM_001198784,NM_001204450,NM_001204451,NM_004748,NM_020739	chr15,chr15,chr15,chr15,chr15	+,-,-,-,-	FLJ27352,CCPG1,CCPG1,CCPG1,CCPG1	-4934,-4896,-4896,-5030,-4896
chr1:45207519-45207872	chr1	+	45207700	45207771	True	NM_006845,NM_153274	chr1,chr1	+,-	KIF2C,BEST4	-2271,45710
chr20:25778441-25779046	chr20	+	25778470	25779058	True	NR_004846,NR_027061,NR_026714	chr20,chr20,chr20	+,-,-	LOC100134868,FAM182B,FAM182B	211376,-1592,2919
chr20:25778441-25779046	chr20	-	26038118	26038706	False	NR_003678,NR_026713	chr20,chr20	-,+	C20orf191,FAM182A	56021,-2919
chr1:27929050-27929269	chr1	+	27929227	27929289	True	NM_001029882,NM_001143912	chr1,chr1	-,+	AHDC1,FAM76A	904,123200
chr17:76228310-76228527	chr17	+	76228309	76228520	True	NR_002219,NM_001204210,NM_001204211,NM_001204212	chr17,chr17,chr17,chr17	-,+,+,+	EPR1,TMEM235,TMEM235,TMEM235	-7526,-969,-969,-969
chr20:9774437-9775657	chr20	+	9775018	9775704	True	NM_022096,NM_020341	chr20,chr20	+,-	ANKRD5,PAK7	239992,44033
chr17:52980066-52981448	chr17	+	52980098	52981172	True	NM_005486,NR_027941	chr17,chr17	+,-	TOM1L1,COX11	-2104,64942
chr12:9440174-9440893	chr12	+	9440269	9440840	True	NR_036263,NR_024374	chr12,chr12	-,+	MIR1244-3,LOC642846	-48122,-4075
chr12:9440174-9440893	chr12	-	9596235	9596806	False	NR_033399,NR_024374	chr12,chr12	-,+	DDX12,LOC642846	4020,-160034
chr12:9440174-9440893	chr12	+	31230871	31231366	False	NM_004399,NM_001135811,NM_030653,NM_152438	chr12,chr12,chr12,chr12	+,-,+,+	DDX11,FAM60A,DDX11,DDX11	-4143,247806,-4143,-4143
chr11:46615782-46616642	chr11	+	46615807	46616435	True	NM_017749,NM_001205120	chr11,chr11	-,+	AMBRA1,ATG13	-2893,22390
chr21:19738210-19739542	chr21	+	19738346	19739560	True	NM_002772,NM_001204174	chr21,chr21	-,+	TMPRSS15,CHODL	36470,-120211
chr20:46039088-46040450	chr20	+	46039168	46040340	True	NM_183048,NM_001174087	chr20,chr20	-,+	ZMYND8,NCOA3	-53694,90260
chrX:23696109-23696515	chrX	+	23696412	23696475	True	NM_006406,NM_001033583	chrX,chrX	+,-	PRDX4,ACOT9	-10828,64985
chr14:102028232-102028489	chr14	+	102028277	102028433	True	NR_002770,NR_031649,NM_001362	chr14,chr14,chr14	-,-,+	DIO3OS,MIR1247,DIO3	-6264,-1518,-640
chr10:61894963-61896186	chr10	+	61894969	61896219	True	NM_001149,NM_001170406	chr10,chr10	-,+	ANK3,CDK1	4605,641869
chr13:33589569-33590081	chr13	+	33589650	33590080	True	NM_004795,NM_178007	chr13,chr13	+,-	KL,STARD13	490,170186
chr9:34125807-34126332	chr9	+	34125937	34126240	True	NM_015397,NM_001171201	chr9,chr9	-,+	DCAF12,UBAP1	581,52762
chrX:85515169-85517152	chrX	+	85515184	85516893	True	NM_001145414,NM_001139515	chrX,chrX	-,+	CHM,DACH2	-212618,1077
chr11:57149376-57150512	chr11	+	57149745	57150513	True	NM_002728,NM_006093,NM_002559	chr11,chr11,chr11	-,-,+	PRG2,PRG3,P2RX3	7667,-1122,-43854
chr16:683956-684429	chr16	+	683956	684464	True	NM_001040165,NM_001040160,NM_001040161,NM_001040162,NM_053284,NM_138418,NM_032366	chr16,chr16,chr16,chr16,chr16,chr16,chr16	-,-,-,-,+,+,-	C16orf13,C16orf13,C16orf13,C16orf13,WFIKKN1,FAM195A,C16orf13	1933,1933,1933,1933,-2995,7384,1933
chr12:1704441-1705968	chr12	+	1704476	1705628	True	NM_030775,NM_152441	chr12,chr12	+,-	WNT5B,FBXL14	20593,-1145
chr6:167621150-167621396	chr6	+	167621246	167621426	True	NM_005299,NM_001145121	chr6,chr6	-,+	GPR31,TCP10L2	-49927,-37216
chr17:38808631-38809118	chr17	+	38808631	38808804	True	NM_001195387,NM_003079	chr17,chr17	+,-	TMEM99,SMARCE1	166539,-4528
chrX:19141515-19141988	chrX	+	19141576	19142033	True	NM_001079858,NM_001079859,NM_001079860,NM_001184835,NM_001184834,NM_001184837,NM_001184836,NM_001184833,NM_000284,NM_005756	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,-,-,-,+,-	GPR64,GPR64,GPR64,GPR64,GPR64,GPR64,GPR64,GPR64,PDHA1,GPR64	-821,-821,-821,-821,-821,-821,-821,-821,219977,-821
chr1:167601058-167602992	chr1	+	167601184	167602872	True	NM_052862,NM_003851	chr1,chr1	+,-	RCSD1,CREG1	-1762,-78128
chr19:7992935-7994363	chr19	+	7992947	7994301	True	NM_206833,NM_003083,NR_030717	chr19,chr19,chr19	-,+,+	CTXN1,SNAPC2,SNAPC2	-1896,-7804,-7131
chr16:50061273-50061959	chr16	+	50061510	50061842	True	NM_153261,NM_015069	chr16,chr16	+,-	TMEM188,ZNF423	-2372,-200592
chr7:114183129-114184017	chr7	+	114183362	114184057	True	NM_002711,NR_037439	chr7,chr7	-,+	PPP1R3A,MIR3666	-624280,109342
chr19:40502929-40503270	chr19	+	40502985	40503099	True	NM_001005851,NM_178544	chr19,chr19	-,+	ZNF780B,ZNF546	59066,-94
chr4:25553577-25554487	chr4	+	25554215	25554507	True	NM_015187,NM_001177998	chr4,chr4	-,+	SEL1L3,SLC34A2	310153,102927
chrX:17649987-17650745	chrX	+	17650025	17650595	True	NM_001136024,NR_033348	chrX,chrX	+,-	NHS,RAI2	2817,228409
chr15:21071192-21071633	chr15	+	21071432	21071620	True	NM_207355,NR_027411	chr15,chr15	-,+	POTEB,GOLGA8C	407,-303809
chr15:21071192-21071633	chr15	+	22082592	22082780	False	NR_015416,NM_207355	chr15,chr15	+,-	LOC727924,POTEB	195251,407
chr6:44194293-44194765	chr6	+	44194330	44194764	True	NM_004955,NM_178148,NM_001078174,NM_001078175,NM_001078176,NM_001078177	chr6,chr6,chr6,chr6,chr6,chr6	+,-,+,+,+,+	SLC29A1,SLC35B2,SLC29A1,SLC29A1,SLC29A1,SLC29A1	-7139,30569,-7139,-3085,-3085,-3018
chr1:9972017-9972717	chr1	+	9972159	9972751	True	NM_022787,NM_001012329,NM_020248	chr1,chr1,chr1	+,-,-	NMNAT1,CTNNBIP1,CTNNBIP1	30734,-1843,-1843
chr9:124329989-124330202	chr9	+	124330037	124330129	True	NR_003191,NM_032552	chr9,chr9	-,+	GGTA1,DAB2IP	-67731,-689
chr14:68280708-68280974	chr14	+	68280715	68280968	True	NM_133510,NM_015346,NM_133509,NM_002877	chr14,chr14,chr14,chr14	+,-,+,+	RAD51L1,ZFYVE26,RAD51L1,RAD51L1	5527,2389,5527,5527
chr3:128185235-128185515	chr3	+	128185248	128185560	True	NM_153330,NR_037890	chr3,chr3	-,+	DNAJB8,LOC285224	581,-2862
chr11:6340736-6341280	chr11	+	6340838	6341078	True	NM_176875,NM_145040	chr11,chr11	+,-	CCKBR,PRKCDBP	-59923,712
chr15:78526756-78527371	chr15	+	78526816	78527232	True	NM_015162,NM_018602,NM_001199377	chr15,chr15,chr15	-,+,-	ACSBG1,DNAJA4,ACSBG1	1,29254,1
chr1:110650775-110652455	chr1	+	110650820	110652400	True	NM_006492,NM_203412	chr1,chr1	-,+	ALX3,UBL4B	-37498,2661
chr5:170215776-170217054	chr5	+	170215785	170217060	True	NM_014211,NM_004137	chr5,chr5	+,-	GABRP,KCNMB1	-5115,-399147
chr5:64919758-64920038	chr5	+	64919785	64920035	True	NM_024941,NM_001656,NM_033228,NM_001093756,NM_001093755,NR_003545,NM_033227	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,-,-,+,+,+,-	C5orf44,TRIM23,TRIM23,C5orf44,C5orf44,C5orf44,TRIM23	522,202,202,522,522,522,202
chr7:111201735-111202111	chr7	+	111201750	111202041	True	NM_032549,NM_018334	chr7,chr7	-,+	IMMP2L,LRRN3	357,-470739
chr19:1241324-1241625	chr19	+	1241328	1241577	True	NM_001001975,NM_177401,NM_001687,NM_152769	chr19,chr19,chr19,chr19	+,+,+,-	ATP5D,MIDN,ATP5D,C19orf26	171,6974,171,-3338
chr10:80829384-80829611	chr10	+	80829512	80829580	True	NR_024429,NR_015429,NR_024431,NM_020338	chr10,chr10,chr10,chr10	-,-,-,+	LOC283050,LOC283050,LOC283050,ZMIZ1	-2307,-2307,-2307,-776
chr12:9103331-9103832	chr12	+	9103342	9103626	True	NM_004426,NM_002355	chr12,chr12	+,-	PHC1,M6PR	-36083,-1090
chr5:10299720-10300768	chr5	+	10300017	10300636	True	NM_012073,NM_138809	chr5,chr5	+,-	CCT5,CMBL	-49794,7589
chr5:87970403-87970616	chr5	+	87970543	87970613	True	NR_024383,NR_030741,NM_022650,NR_024384	chr5,chr5,chr5,chr5	-,-,+,-	LOC645323,MIR9-2,RASA1,LOC645323	3699,-7786,-1405828,-1397
chr15:90809401-90810331	chr15	+	90809440	90810248	True	NM_001033088,NR_028052,NM_006384	chr15,chr15,chr15	+,+,-	NGRN,NGRN,CIB1	-596,-596,-32161
chr19:46285766-46286425	chr19	+	46285983	46286234	True	NM_004943,NM_004409,NM_001081563,NM_001081562,NM_001081560,NM_004497	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,+	DMWD,DMPK,DMPK,DMPK,DMPK,FOXA3	9876,-168,-2122,-168,-168,81283
chr17:17379988-17380347	chr17	+	17380103	17380345	True	NM_018019,NM_001199989	chr17,chr17	+,-	MED9,RASD1	-26,19414
chr5:136833689-136834040	chr5	+	136833689	136834087	True	NM_004598,NR_002713	chr5,chr5	-,+	SPOCK1,NPY6R	981,302794
chr14:103776214-103777278	chr14	+	103776244	103777060	True	NR_033938,NM_001969	chr14,chr14	-,+	LOC100131366,EIF5	-120879,23432
chr4:77129698-77130612	chr4	+	77129798	77130385	True	NM_005506,NM_001204255,NM_001136570	chr4,chr4,chr4	-,-,+	SCARB2,SCARB2,FAM47E	4728,4728,42467
chr1:169395403-169396561	chr1	+	169395439	169396479	True	NM_003666,NM_021179	chr1,chr1	+,-	BLZF1,C1orf114	-58301,241
chr5:115909973-115910327	chr5	+	115909990	115910242	True	NM_020796,NM_016144	chr5,chr5	-,+	SEMA6A,COMMD10	359,-489314
chr19:17379817-17380250	chr19	+	17379854	17380050	True	NM_001033549,NM_031941,NM_014173	chr19,chr19,chr19	+,-,+	BABAM1,USHBP1,BABAM1	-1673,-4310,-1673
chr16:30572155-30572700	chr16	+	30572286	30572686	True	NM_001172679,NM_002209,NM_033410	chr16,chr16,chr16	-,+,-	ZNF764,ITGAL,ZNF764	-2644,-88357,-2644
chr16:3143248-3144444	chr16	+	3143531	3144356	True	NM_001042428,NM_032805	chr16,chr16	+,-	ZNF205,ZSCAN10	18206,-670
chr1:15804897-15805486	chr1	+	15805348	15805476	True	NM_015849,NM_001229	chr1,chr1	+,-	CELA2B,CASP9	-2803,45514
chr2:106013722-106013936	chr2	+	106013721	106013969	True	NM_001450,NM_201555,NM_001039492,NM_024093	chr2,chr2,chr2,chr2	-,-,-,+	FHL2,FHL2,FHL2,C2orf49	1762,1762,1656,-59761
chr4:57626500-57627743	chr4	+	57626575	57627789	True	NM_021114,NM_005612	chr4,chr4	-,+	SPINK2,REST	60154,146252
chr6:33587440-33588194	chr6	+	33587523	33588187	True	NR_027908,NM_002224	chr6,chr6	-,+	C6orf227,ITPR3	-26408,968
chr8:145742143-145742377	chr8	+	145742225	145742407	True	NM_138431,NM_014665,NM_004260	chr8,chr8,chr8	+,+,-	MFSD3,LRRC14,RECQL4	-7724,955,853
chr6:90541654-90542371	chr6	+	90541957	90542198	True	NM_001137667,NM_014611,NM_001137668,NM_012115	chr6,chr6,chr6,chr6	+,-,+,+	CASP8AP2,MDN1,CASP8AP2,CASP8AP2	-2390,-12515,-2390,-2390
chr5:179220668-179222005	chr5	+	179221061	179222021	True	NM_054013,NR_031598,NM_145867	chr5,chr5,chr5	-,-,+	MGAT4B,MIR1229,LTC4S	7904,3375,-126
chr19:35636251-35637132	chr19	+	35636269	35637030	True	NM_022006,NM_139284,NM_005031,NM_021902,NM_144779,NM_001164605,NM_014164,NR_028406	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+,+,+	FXYD7,LGI4,FXYD1,FXYD1,FXYD5,FXYD5,FXYD5,FXYD5	-2166,-10091,-5928,-6588,8641,8814,8594,8641
chr17:26628758-26628959	chr17	+	26628757	26628849	True	NM_014573,NR_028334	chr17,chr17	+,-	TMEM97,FLJ40504	17271,5621
chr12:11312480-11314283	chr12	+	11312601	11314163	True	NR_036583,NR_037918	chr12,chr12	+,-	LOC100129361,PRH1-PRR4	9616,10111
chr10:72233702-72234036	chr10	+	72233724	72234010	True	NM_018055,NM_014431	chr10,chr10	-,+	NODAL,KIAA1274	-32259,4553
chr5:134310925-134312136	chr5	+	134310930	134312114	True	NM_002653,NM_178019	chr5,chr5	-,+	PITX1,CATSPER3	57900,-7385
chr15:91083811-91084695	chr15	+	91084148	91084747	True	NR_028287,NM_022769	chr15,chr15	-,+	GABARAPL3,CRTC3	-191469,-11004
chr15:56258706-56259176	chr15	+	56258939	56259094	True	NM_198524,NM_006154	chr15,chr15	+,-	TEX9,NEDD4	398549,26798
chr5:177593996-177594204	chr5	+	177594027	177594249	True	NM_022762,NM_017838	chr5,chr5	+,-	RMND5B,NHP2	-36050,-13066
chr19:47220853-47221746	chr19	+	47220918	47221610	True	NM_001079882,NM_001039885,NM_001079880,NM_001079881,NM_016457,NR_036157	chr19,chr19,chr19,chr19,chr19,chr19	-,+,-,-,-,-	PRKD2,FKRP,PRKD2,PRKD2,PRKD2,MIR320E	-3341,27692,-534,-534,-534,-8316
chr7:128046806-128047380	chr7	+	128046814	128047320	True	NM_000883,NM_001142576,NM_001142574,NM_001142575,NM_001142573,NM_183243,NM_001098786,NM_001102605	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,-,+,-	IMPDH1,IMPDH1,IMPDH1,IMPDH1,IMPDH1,IMPDH1,C7orf68,IMPDH1	2766,2766,-790,-790,-790,2766,48563,2766
chr1:155230184-155231450	chr1	+	155230311	155231493	True	NM_020897,NM_198264,NM_052837,NM_005698,NM_006589	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	HCN3,FAM189B,SCAMP3,SCAMP3,FAM189B	15880,-5037,752,752,-5037
chr14:78178321-78178775	chr14	+	78178423	78178533	True	NM_031210,NM_006020	chr14,chr14	+,-	C14orf156,ALKBH1	-4051,-4067
chr3:127843611-127843948	chr3	+	127843631	127843853	True	NM_021937,NM_003707	chr3,chr3	+,-	EEFSEC,RUVBL1	28459,-960
chr19:38863771-38865196	chr19	+	38864208	38865219	True	NM_152657,NM_002812	chr19,chr19	-,+	GGN,PSMD8	13499,-30
chr17:73264464-73265799	chr17	+	73265095	73265615	True	NM_015971,NR_036520,NM_001172703,NM_001172704,NM_138619,NM_020679,NR_033345,NM_014001	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,-,-,-,-,-,-	MRPS7,LOC100287042,GGA3,GGA3,GGA3,MIF4GD,GGA3,GGA3	-7398,1764,-6651,-6651,-7388,1738,-7388,-7388
chr9:124988047-124988279	chr9	+	124988065	124988321	True	NM_199160,NM_001173512,NM_014368	chr9,chr9,chr9	-,+,-	LHX6,MRRF,LHX6	2748,38560,2748
chr3:79792955-79793817	chr3	+	79793011	79793872	True	NM_001128929,NM_002941	chr3,chr3	+,-	ROBO2,ROBO1	-2645899,23244
chr19:11465557-11466076	chr19	+	11465751	11466021	True	NM_001170635,NM_001080503,NM_022737,NM_198536,NM_001145416,NM_033408	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,-,-,-	LPPR2,CCDC159,LPPR2,TMEM205,TMEM205,TMEM205	40,-8624,40,-8770,-8770,-8770
chr9:5338243-5339178	chr9	+	5338547	5339081	True	NM_002195,NM_006911	chr9,chr9	+,-	INSL4,RLN1	-107187,842
chr9:5338243-5339178	chr9	+	5303381	5303915	False	NM_005059,NM_134441,NM_002195	chr9,chr9,chr9	-,-,+	RLN2,RLN2,INSL4	715,715,-72021
chr16:66958422-66958648	chr16	+	66958603	66958665	True	NM_003869,NM_016062,NR_036684,NM_001204746,NM_001204744,NM_001204745,NR_024525,NM_001128850,NM_004165,NM_198061,NM_004062	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,-,+,-,-,-,-,-,-,+,-	CES2,FAM96B,CES2,CDH16,CDH16,CDH16,FAM96B,RRAD,RRAD,CES2,CDH16	9681,9705,9708,-5716,-5716,-5716,9705,824,824,9681,-5716
chr12:48097868-48098310	chr12	+	48097872	48098108	True	NM_001146076,NM_001146075,NM_017842,NM_024604	chr12,chr12,chr12,chr12	-,-,+,-	RPAP3,RPAP3,SLC48A1,RPAP3	1786,1786,68858,1786
chr4:108612706-108614591	chr4	+	108612710	108614612	True	NM_001136258,NM_005443	chr4,chr4	+,-	SGMS2,PAPSS1	131108,26864
chr11:61582770-61583135	chr11	+	61582797	61582977	True	NM_013402,NM_004265,NR_031729	chr11,chr11,chr11	-,+,-	FADS1,FADS2,MIR1908	1602,12735,-85
chr7:24797325-24797833	chr7	+	24797457	24797837	True	NM_004403,NM_016447,NM_001127453,NM_001127454	chr7,chr7,chr7,chr7	-,+,-,-	DFNA5,MPP6,DFNA5,DFNA5	-36,-184423,-374,-36
chr6:114179177-114179799	chr6	+	114179245	114179771	True	NM_001527,NM_002356	chr6,chr6	-,+	HDAC2,MARCKS	112638,-770
chr20:25602482-25603357	chr20	+	25602594	25603392	True	NM_021067,NM_152667	chr20,chr20	+,-	GINS1,NANP	-214322,1306
chr2:115224541-115225518	chr2	+	115224626	115225144	True	NR_034130,NM_001178036	chr2,chr2	-,+	LOC100499194,DPP10	-487065,-5498
chr17:19769743-19770099	chr17	+	19769843	19770121	True	NM_000382,NM_014683,NM_001142610	chr17,chr17,chr17	+,-,-	ALDH3A2,ULK2,ULK2	-217837,1168,1168
chr12:8604884-8605978	chr12	+	8605010	8605851	True	NM_001007033,NR_024420	chr12,chr12	+,-	CLEC6A,LOC389634	2739,-61662
chr1:6319463-6319772	chr1	+	6319469	6319819	True	NM_207370,NM_001024598	chr1,chr1	-,+	GPR153,HES3	1266,-15268
chr5:1522274-1522523	chr5	+	1522296	1522508	True	NM_024830,NM_004553	chr5,chr5	-,+	LPCAT1,NDUFS6	1618,278987
chr20:39994220-39994579	chr20	+	39994259	39994479	True	NM_022896,NM_052846	chr20,chr20	+,-	LPIN3,EMILIN3	-24750,1069
chrY:16638244-16639261	chrY	+	16638606	16639299	True	NR_028318,NR_028319,NM_004679,NM_014893	chrY,chrY,chrY,chrY	+,+,-,+	NLGN4Y,NLGN4Y,VCY,NLGN4Y	-4173,-2207,-540214,-3035
chr11:111898428-111898997	chr11	+	111898682	111898945	True	NM_001931,NM_001082619	chr11,chr11	+,-	DLAT,PIH1D2	-3203,46009
chr15:75182549-75182806	chr15	+	75182599	75182727	True	NM_002435,NM_020447	chr15,chr15	+,-	MPI,C15orf17	-240,16785
chr16:23653962-23654250	chr16	+	23654185	23654250	True	NM_001199011,NM_032486,NR_037573,NM_001199743,NM_024675	chr16,chr16,chr16,chr16,chr16	+,+,+,+,-	DCTN5,DCTN5,DCTN5,DCTN5,PALB2	-1555,-1555,-1555,-1555,-1507
chr2:55508075-55508833	chr2	+	55508466	55508716	True	NR_027258,NM_002453	chr2,chr2	+,-	PRORSD1P,MTIF2	738,-12082
chr11:109294415-109294745	chr11	+	109294527	109294673	True	NM_015065,NM_207645	chr11,chr11	-,+	EXPH5,C11orf87	-830153,-1732
chr14:35097587-35098175	chr14	+	35097909	35098217	True	NR_002937,NM_021249,NM_152233	chr14,chr14,chr14	+,-,-	C14orf19,SNX6,SNX6	310910,1148,1199
chr2:119604774-119605294	chr2	+	119604889	119605266	True	NM_001426,NM_006770	chr2,chr2	-,+	EN1,MARCO	543,94478
chr9:100931428-100931834	chr9	+	100931433	100931617	True	NM_018946,NM_003389	chr9,chr9	+,-	NANS,CORO2A	-112525,3607
chr22:39493552-39494694	chr22	+	39493669	39494642	True	NM_001166004,NM_181773,NM_175709,NM_001166002,NM_001166003	chr22,chr22,chr22,chr22,chr22	+,+,-,+,+	APOBEC3H,APOBEC3H,CBX7,APOBEC3H,APOBEC3H	-492,-492,53946,-492,-492
chr8:37605471-37605715	chr8	+	37605495	37605753	True	NR_003671,NM_001003790	chr8,chr8	-,+	LOC728024,ERLIN2	9,-11347
chr5:176316678-176318428	chr5	+	176316707	176318383	True	NM_133369,NM_002115	chr5,chr5	+,-	UNC5A,HK3	-79198,8000
chr1:45201161-45203145	chr1	+	45201908	45202918	True	NM_006845,NM_153274	chr1,chr1	+,-	KIF2C,BEST4	2571,50558
chr7:91781185-91782075	chr7	+	91781285	91781970	True	NM_001161528,NM_019004	chr7,chr7	-,+	LOC401387,ANKIB1	12681,93577
chr11:27531175-27532325	chr11	+	27531269	27531985	True	NR_033312,NR_033313,NR_033314,NR_033315,NR_002832,NM_018362	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,-	BDNF-AS1,BDNF-AS1,BDNF-AS1,BDNF-AS1,BDNF-AS1,LIN7C	-2934,-2934,-2934,-2934,-2934,-2943
chr12:85418477-85419211	chr12	+	85418593	85418905	True	NM_001100917,NM_032165	chr12,chr12	-,+	TSPAN19,LRRIQ1	11210,11193
chrX:118735585-118737053	chrX	+	118735900	118736987	True	NM_001173487,NM_181777,NM_001173488,NM_017544	chrX,chrX,chrX,chrX	-,+,-,-	NKRF,UBE2A,NKRF,NKRF	2916,-21660,-8787,2916
chr8:67051501-67053019	chr8	+	67051770	67052988	True	NM_000756,NM_184087	chr8,chr8	-,+	CRH,TRIM55	37908,-12543
chr9:139377699-139377938	chr9	+	139377832	139377896	True	NM_152571,NM_014866	chr9,chr9	+,-	C9orf163,SEC16A	50,-325
chr12:113842182-113842986	chr12	+	113842375	113843033	True	NM_138432,NM_006843	chr12,chr12	+,-	SDSL,SDS	17182,-683
chr1:75196184-75197683	chr1	+	75196422	75197575	True	NM_001134759,NM_001162916,NM_001130043,NM_001130042,NR_027962,NM_138467,NM_001889	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,+,-,-,+,+,-	CRYZ,TYW3,CRYZ,CRYZ,TYW3,TYW3,CRYZ	1574,1260,1574,1574,1286,1264,1574
chr20:34115538-34115882	chr20	+	34115770	34115887	True	NM_015966,NR_026933,NM_001145350	chr20,chr20,chr20	+,-,-	ERGIC3,C20orf173,C20orf173	13890,1645,1645
chr19:58988719-58990406	chr19	+	58988948	58990400	True	NM_012254,NM_017908	chr19,chr19	-,+	SLC27A5,ZNF446	33082,-1204
chr17:61919446-61919684	chr17	+	61919450	61919726	True	NM_001199163,NR_002947,NM_001098426	chr17,chr17,chr17	+,+,-	PSMC5,TCAM1P,SMARCD2	-14457,14649,675
chr11:1331027-1331277	chr11	+	1331036	1331316	True	NM_019009,NR_029409	chr11,chr11	-,+	TOLLIP,LOC255512	-144,-149
chr18:61018267-61020119	chr18	+	61018277	61020059	True	NM_002035,NM_002639	chr18,chr18	-,+	KDSR,SERPINB5	14507,124084
chr1:114698024-114698597	chr1	+	114698168	114698555	True	NM_205848,NM_020190	chr1,chr1	-,+	SYT6,OLFML3	-1696,-176189
chr15:64673478-64674445	chr15	+	64673530	64674303	True	NM_014736,NM_001029989,NM_016213	chr15,chr15,chr15	-,-,+	KIAA0101,KIAA0101,TRIP4	72,72,5699
chr8:98881234-98881467	chr8	+	98881300	98881482	True	NR_002581,NM_030583,NM_002380	chr8,chr8,chr8	-,+,+	SNORA72,MATN2,MATN2	173013,-40,-40
chr14:31485050-31485840	chr14	+	31485219	31485693	True	NM_001083893,NM_007077,NR_030354,NM_014574,NM_001128126	chr14,chr14,chr14,chr14,chr14	-,+,-,-,+	STRN3,AP4S1,MIR624,STRN3,AP4S1	9966,8989,-1271,9966,8989
chr11:912698-913627	chr11	+	912865	913384	True	NM_012305,NM_001142675,NM_001142674,NM_001142677,NM_001142676,NM_023947	chr11,chr11,chr11,chr11,chr11,chr11	+,-,-,-,-,-	AP2A2,CHID1,CHID1,CHID1,CHID1,CHID1	12456,1726,-1991,-1991,-1991,-1991
chr4:100756377-100756877	chr4	+	100756518	100756870	True	NM_021970,NM_014395	chr4,chr4	-,+	LAMTOR3,DAPP1	58883,-18592
chr11:64701231-64702313	chr11	+	64701333	64702283	True	NM_006244,NM_130769	chr11,chr11	+,-	PPP2R5B,GPHA2	-9241,1127
chr11:2182033-2182571	chr11	+	2182079	2182613	True	NR_028044,NM_000207,NR_003512,NM_001185098,NM_001042376,NM_001185097	chr11,chr11,chr11,chr11,chr11,chr11	+,-,-,-,-,-	IGF2AS,INS,INS-IGF2,INS,INS-IGF2,INS	-20372,60,60,60,60,60
chr10:5043823-5044946	chr10	+	5043825	5044801	True	NM_001135241,NM_001353	chr10,chr10	-,+	AKR1C2,AKR1C1	1312,-38422
chr9:116139275-116139652	chr9	+	116139418	116139512	True	NM_017688,NM_031219	chr9,chr9	+,-	BSPRY,HDHD3	-27657,-1077
chr13:49642422-49644308	chr13	+	49643398	49644222	True	NM_014923,NM_030925	chr13,chr13	+,-	FNDC3A,CAB39L	40226,331569
chr1:171462186-171463398	chr1	+	171462278	171463424	True	NM_000261,NM_015172	chr1,chr1	-,+	MYOC,PRRC2C	158405,-7669
chr19:892459-892730	chr19	+	892608	892680	True	NM_005481,NM_032551	chr19,chr19	-,+	MED16,KISS1R	588,24661
chr1:50890151-50890613	chr1	+	50890199	50890615	True	NM_021952,NM_032110	chr1,chr1	+,-	ELAVL4,DMRTA2	-315656,-1058
chr22:31505699-31507312	chr22	+	31505914	31507063	True	NM_080430,NM_001002837	chr22,chr22	-,+	SELM,INPP5J	-2363,11897
chr12:132195908-132196213	chr12	+	132196025	132196233	True	NM_175066,NM_004592	chr12,chr12	-,+	DDX51,SFSWAP	432697,-441
chr13:51709016-51709240	chr13	+	51709061	51709233	True	NR_003923,NM_145019	chr13,chr13	-,+	GUCY1B2,FAM124A	-68768,87273
chr5:37841151-37841401	chr5	+	37841207	37841439	True	NM_152403,NM_000514,NM_001190469,NM_001190468,NM_199231	chr5,chr5,chr5,chr5,chr5	+,-,-,-,-	EGFLAM,GDNF,GDNF,GDNF,GDNF	417093,-1425,-5278,-5278,-5614
chr1:6640633-6640941	chr1	+	6640660	6640954	True	NM_014851,NM_005341	chr1,chr1	-,+	KLHL21,ZBTB48	22025,-648
chr15:66797649-66797870	chr15	+	66797677	66797755	True	NM_006049,NM_000968,NR_003105,NR_002440,NR_002441,NR_002442,NR_002443,NM_017975	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,+,-,-,-,-,+	SNAPC5,RPL4,ZWILCH,SNORD16,SNORD18A,SNORD18B,SNORD18C,ZWILCH	-7531,-493,-297,-2429,-2025,-3248,-4021,-297
chr18:28603815-28604499	chr18	+	28603968	28604548	True	NM_001941,NM_001942	chr18,chr18	-,+	DSC3,DSG1	18295,293503
chr13:49992883-49993636	chr13	+	49992984	49993502	True	NM_031915,NM_030925	chr13,chr13	+,-	SETDB2,CAB39L	24926,-17249
chr2:15674415-15675568	chr2	+	15674466	15675350	True	NM_004939,NM_015909	chr2,chr2	+,-	DDX1,NBAS	56419,26164
chr7:38696263-38696968	chr7	+	38696476	38696993	True	NM_139316,NM_001166018	chr7,chr7	-,+	AMPH,POU6F2	-25309,320615
chr3:44802333-44802861	chr3	+	44802531	44802903	True	NM_020242,NM_020696	chr3,chr3	+,-	KIF15,KIAA1143	305,320
chrX:48540431-48540798	chrX	+	48540440	48540746	True	NM_013271,NM_000377	chrX,chrX	-,+	PCSK1N,WAS	153264,1439
chr5:55158611-55160001	chr5	+	55158638	55160034	True	NM_139017,NM_001190981	chr5,chr5	+,-	IL31RA,IL6ST	-11357,130837
chr1:153650371-153650859	chr1	+	153650421	153650729	True	NM_004515,NM_000906	chr1,chr1	-,+	ILF2,NPR1	-6942,434
chr14:68090744-68091294	chr14	+	68090833	68091305	True	NM_001172,NM_004569	chr14,chr14	+,-	ARG2,PIGH	-4305,-23816
chr4:55524471-55524673	chr4	+	55524598	55524696	True	NM_002253,NM_000222,NM_001093772	chr4,chr4,chr4	-,+,+	KDR,KIT,KIT	467116,-554,-554
chr7:100027377-100027680	chr7	+	100027412	100027683	True	NM_001194992,NM_001194991,NM_001194990,NM_019606,NM_017984,NM_145030	chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,-,-	MEPCE,MEPCE,MEPCE,MEPCE,ZCWPW1,C7orf47	-1050,-1050,-1050,-209,-1110,6461
chr4:123115310-123116031	chr4	+	123115312	123116044	True	NM_001130698,NM_015312	chr4,chr4	-,+	TRPC3,KIAA1109	-242403,-23613
chr10:123356452-123356935	chr10	+	123356454	123356817	True	NM_000141,NM_022970,NM_001144916,NM_001144917,NM_001144914,NM_001144915,NM_206861,NM_001144913,NM_001144918,NM_001144919	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,-,-,+,-,-,-	FGFR2,FGFR2,FGFR2,FGFR2,FGFR2,FGFR2,TACC2,FGFR2,FGFR2,FGFR2	1205,1205,-2682,1205,-2973,-295,391871,-2973,1205,1205
chr11:131779467-131779697	chr11	+	131779469	131779667	True	NM_014758,NM_016522,NM_001144059,NM_001144058	chr11,chr11,chr11,chr11	-,+,+,+	SNX19,NTM,NTM,NTM	-993087,1044,1044,1044
chr1:1709169-1709401	chr1	+	1709198	1709343	True	NM_001198993,NR_002946,NM_001198994,NM_023018	chr1,chr1,chr1,chr1	-,+,-,-	NADK,MMP23A,NADK,NADK	1011,-77871,2222,623
chr9:90532254-90532727	chr9	+	90532440	90532700	True	NM_001145124,NM_001039803	chr9,chr9	+,-	FAM75C1,CDK20	176,57045
chr9:90532254-90532727	chr9	+	90528971	90529231	False	NM_001145124,NM_001039803	chr9,chr9	+,-	FAM75C1,CDK20	3645,60514
chr9:90532254-90532727	chr9	-	90750051	90750236	False	NM_001145124,NM_001166137	chr9,chr9	+,-	FAM75C1,FAM75C2	-217250,-151
chr9:90532254-90532727	chr9	-	90753566	90753825	False	NM_001145124,NM_001166137	chr9,chr9	+,-	FAM75C1,FAM75C2	-220740,-3666
chr13:30946410-30946988	chr13	+	30946418	30946884	True	NM_005800,NR_024464	chr13,chr13	+,-	USPL1,LOC100188949	244945,1202
chr20:60696339-60696679	chr20	+	60696519	60696655	True	NM_144703,NM_002792	chr20,chr20	+,-	LSM14B,PSMA7	861,21869
chr14:94776769-94778139	chr14	+	94776811	94778007	True	NM_058237,NM_001756	chr14,chr14	+,-	PPP4R4,SERPINA6	-136213,11732
chr1:11023165-11024778	chr1	+	11023525	11024627	True	NM_007375,NM_001170754	chr1,chr1	+,-	TARDBP,C1orf127	48051,17517
chrX:135394062-135394765	chrX	+	135394142	135394465	True	NM_001173516,NM_153834	chrX,chrX	-,+	MAP7D3,GPR112	-55501,-11075
chr10:12086906-12088011	chr10	+	12087354	12088016	True	NM_018706,NM_080599,NM_015542	chr10,chr10,chr10	+,-,-	DHTKD1,UPF2,UPF2	22917,-2331,-2546
chr19:54928268-54928999	chr19	+	54928365	54929039	True	NM_001201461,NM_198988,NM_020659,NM_001005367	chr19,chr19,chr19,chr19	+,-,+,+	TTYH1,LENG9,TTYH1,TTYH1	-1811,45905,-1811,-1811
chr16:89884099-89884910	chr16	+	89884113	89884952	True	NM_032451,NM_000135,NM_001018112	chr16,chr16,chr16	+,-,-	SPIRE2,FANCA,FANCA	9954,-1048,-1048
chr12:42723200-42723725	chr12	+	42723245	42723587	True	NM_016488,NM_001143789,NM_201515,NM_201439,NM_201438,NM_001143788,NM_033114,NM_001143787,NM_201440	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,+,+,+,+,-,+,+	PPHLN1,PPHLN1,PPHLN1,PPHLN1,PPHLN1,PPHLN1,ZCRB1,PPHLN1,PPHLN1	-3366,-3366,-3366,-3366,-3366,-3366,-3313,-3366,-3366
chr14:50472701-50473431	chr14	+	50472704	50473313	True	NM_001012706,NM_001663	chr14,chr14	-,+	C14orf182,ARF6	982,-113019
chr4:54424474-54425092	chr4	+	54424566	54425120	True	NM_032622,NM_030917	chr4,chr4	-,+	LNX1,FIP1L1	-130,-180798
chr2:202097091-202098538	chr2	+	202097157	202098553	True	NM_001080124,NM_033355,NM_001127391,NM_001228,NM_033358	chr2,chr2,chr2,chr2,chr2	+,+,-,+,+	CASP8,CASP8,ALS2CR12,CASP8,CASP8	-20,-20,123598,-20,-20
chr10:28967686-28968926	chr10	+	28967808	28968965	True	NR_033805,NM_012342	chr10,chr10	-,+	LOC220906,BAMBI	-146525,-1435
chr2:48116346-48118114	chr2	+	48116414	48117451	True	NM_025133,NM_000179	chr2,chr2	-,+	FBXO11,MSH6	-556,-106256
chr14:50476882-50478855	chr14	+	50477106	50478444	True	NM_001012706,NM_001663	chr14,chr14	-,+	C14orf182,ARF6	-2868,-117421
chr19:44139354-44139722	chr19	+	44139481	44139765	True	NM_001145641,NM_145296	chr19,chr19	+,-	SRRM5,CADM4	-23279,4276
chrX:53459718-53460042	chrX	+	53459880	53459958	True	NM_001037811,NM_001031745,NM_004493	chrX,chrX,chrX	-,+,-	HSD17B10,RIBC1,HSD17B10	1415,-10054,1415
chr4:154227203-154229097	chr4	+	154227572	154229073	True	NM_032117,NR_001562	chr4,chr4	+,-	MND1,ANXA2P1	36727,940
chr5:60457183-60458279	chr5	+	60457310	60457925	True	NM_001048249,NM_020928	chr5,chr5	-,+	C5orf43,ZSWIM6	427,170174
chr2:87034367-87034661	chr2	+	87034483	87034697	True	NM_001145873,NR_037931	chr2,chr2	-,+	CD8A,LOC100286979	872,54250
chr2:86944864-86946495	chr2	+	86944998	86946391	True	NM_022780,NM_001198954	chr2,chr2	+,-	RMND5A,RNF103-VPS24	1022,1904
chr2:86944864-86946495	chr2	-	87304581	87305592	False	NR_026846,NM_001024457	chr2,chr2	-,+	LOC285074,RGPD1	-1045,-159894
chr16:2960545-2961183	chr16	+	2960556	2961089	True	NM_032296,NM_022119,NM_020912	chr16,chr16,chr16	+,-,+	FLYWCH1,PRSS22,FLYWCH1	890,-52385,890
chr7:100473688-100474763	chr7	+	100474160	100474724	True	NM_001015072,NM_003302,NM_001128853,NM_001128852,NM_015908,NM_001128854	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,+,+	UFSP1,TRIP6,SRRT,SRRT,SRRT,SRRT	12665,-9273,-1522,-1522,-1522,-1522
chr6:128243469-128244582	chr6	+	128243477	128244434	True	NM_001164687,NM_001010905	chr6,chr6	-,+	THEMIS,C6orf58	-3701,-345216
chr15:72414547-72414782	chr15	+	72414564	72414774	True	NM_145204,NM_006901,NM_001172109,NM_001166340,NM_001172111,NM_001172110	chr15,chr15,chr15,chr15,chr15,chr15	+,-,+,+,+,+	SENP8,MYO9A,SENP8,SENP8,SENP8,SENP8	-3992,-4142,-5431,-8024,-3992,-5377
chr6:33773982-33774656	chr6	+	33774158	33774684	True	NM_002224,NM_002418,NM_001184698,NM_001040109	chr6,chr6,chr6,chr6	+,-,-,-	ITPR3,MLN,MLN,MLN	-185054,-2365,-2365,-2365
chr19:58975007-58976370	chr19	+	58975099	58976080	True	NM_003433,NM_014347	chr19,chr19	-,+	ZNF132,ZNF324	-23510,2331
chr7:84568882-84569352	chr7	+	84569114	84569296	True	NM_000840,NM_152754	chr7,chr7	+,-	GRM3,SEMA3D	1703933,182001
chr11:113570716-113572697	chr11	+	113570992	113572354	True	NM_001101389,NM_030770	chr11,chr11	+,-	CLDN25,TMPRSS5	78163,4764
chr19:40338452-40338843	chr19	+	40338781	40338868	True	NM_001143832,NM_001436	chr19,chr19	+,-	LEUTX,FBL	-71611,-1727
chr3:149894006-149894436	chr3	+	149894011	149894480	True	NM_053024,NR_036538	chr3,chr3	-,+	PFN2,LOC646903	-205270,-204996
chr7:72849361-72849592	chr7	+	72849438	72849632	True	NM_003508,NM_032408	chr7,chr7	+,-	FZD9,BAZ1B	-1380,87033
chr2:74881919-74883679	chr2	+	74882161	74883644	True	NM_138804,NM_004263	chr2,chr2	-,+	C2orf65,SEMA4F	-6997,-819
chr17:65372620-65372887	chr17	+	65372639	65372887	True	NM_002816,NM_181671,NM_012417,NM_174871	chr17,chr17,chr17,chr17	-,+,+,-	PSMD12,PITPNC1,PITPNC1,PSMD12	-9918,1036,1036,-9918
chr8:135712512-135712747	chr8	+	135712511	135712735	True	NM_001167583,NM_001029939,NR_002438,NM_001174158	chr8,chr8,chr8,chr8	-,-,+,-	ZFAT,ZFAT,ZFAT-AS1,ZFAT	-3710,-3710,-102248,-3710
chr20:57430076-57430425	chr20	+	57430288	57430368	True	NM_001077490,NM_080425,NR_002785	chr20,chr20,chr20	+,+,-	GNAS,GNAS,GNAS-AS1	-2303,-2303,-4330
chr19:9200258-9201269	chr19	+	9200413	9201065	True	NM_001005193,NM_001004456	chr19,chr19	-,+	OR7G2,OR1M1	12981,2855
chr2:48133352-48133618	chr2	+	48133391	48133651	True	NM_000179,NM_001190274	chr2,chr2	+,-	MSH6,FBXO11	-123228,-459
chr10:135187263-135187480	chr10	+	135187312	135187517	True	NM_207127,NM_152911,NM_004092,NR_037509,NM_207128	chr10,chr10,chr10,chr10,chr10	+,+,-,-,+	PAOX,PAOX,ECHS1,MIR3944,PAOX	5223,5223,-404,-2145,5223
chrY:2710207-2711627	chrY	+	2710221	2711617	True	NM_003140,NM_001008	chrY,chrY	-,+	SRY,RPS4Y1	-54429,-649
chr17:40541117-40542998	chr17	+	40541247	40542536	True	NM_001130020,NM_213662,NM_003150,NM_139276	chr17,chr17,chr17,chr17	+,-,-,-	ATP6V0A1,STAT3,STAT3,STAT3	68325,-842,-734,-734
chr9:502819-503409	chr9	+	503162	503438	True	NM_152569,NM_015158	chr9,chr9	-,+	C9orf66,KANK1	-287269,1264
chr5:173413458-173413689	chr5	+	173413539	173413695	True	NM_138369,NM_001144954	chr5,chr5	-,+	BOD1,C5orf47	-369873,2466
chr3:186523694-186523909	chr3	+	186523700	186523908	True	NR_002588,NM_181573,NM_002916	chr3,chr3,chr3	+,-,-	SNORA4,RFC4,RFC4	-18354,626,432
chr4:186459927-186461120	chr4	+	186459989	186461165	True	NM_001114357,NM_001114107,NM_014476	chr4,chr4,chr4	+,-,-	C4orf47,PDLIM3,PDLIM3	-109495,-3277,-3277
chr11:108460102-108461667	chr11	+	108460145	108461335	True	NM_015065,NM_004398	chr11,chr11	-,+	EXPH5,DDX10	3089,74480
chr17:80291623-80291842	chr17	+	80291717	80291831	True	NM_003004,NM_207459	chr17,chr17	-,+	SECTM1,TEX19	140,25291
chr19:13081961-13082183	chr19	+	13081995	13082064	True	NM_152654,NM_052850	chr19,chr19	+,-	DAND5,GADD45GIP1	-1614,-13945
chr4:123543177-123543919	chr4	+	123543292	123543940	True	NM_001178007,NM_021803	chr4,chr4	+,-	BBS12,IL21	109916,-1081
chr15:90779093-90780047	chr15	+	90779119	90780096	True	NM_001013657,NM_006384	chr15,chr15	+,-	C15orf58,CIB1	-1689,-1840
chr4:113170168-113170667	chr4	+	113170456	113170519	True	NM_018569,NM_052864	chr4,chr4	+,-	AP1AR,TIFA	-17615,36593
chr1:220922086-220922931	chr1	+	220922218	220922769	True	NM_017898,NM_012414	chr1,chr1	+,-	MOSC2,RAB3GAP2	-593,-476375
chr11:68781200-68781954	chr11	+	68781257	68781757	True	NM_139075,NM_001098515,NM_145015	chr11,chr11,chr11	+,-,-	TPCN2,MRGPRF,MRGPRF	34592,-407,-407
chr1:22326678-22327857	chr1	+	22326815	22327678	True	NM_005529,NM_005747	chr1,chr1	-,+	HSPG2,CELA3A	-63065,470
chr1:22326678-22327857	chr1	+	22301890	22302300	False	NM_005529,NM_007352	chr1,chr1	-,+	HSPG2,CELA3B	-38140,1117
chr5:127418321-127418593	chr5	+	127418367	127418529	True	NR_015360,NM_001046	chr5,chr5	-,+	FLJ33630,SLC12A2	287,953
chr4:20254238-20254467	chr4	+	20254248	20254490	True	NM_147181,NM_004787	chr4,chr4	-,+	KCNIP4,SLIT2	597851,744
chr11:1888030-1888612	chr11	+	1888138	1888526	True	NR_036185,NM_001013254,NM_001013255,NM_001013253	chr11,chr11,chr11,chr11	-,+,+,+	MIR4298,LSP1,LSP1,LSP1	-7372,3572,3627,1376
chr11:10478818-10479357	chr11	+	10478818	10479181	True	NM_001025390,NM_001025389,NM_000480,NM_001172430,NM_001172431,NM_001190702	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,-	AMPD3,AMPD3,AMPD3,AMPD3,AMPD3,MTRNR2L8	-1393,-2208,-6650,3496,-7006,51593
chr14:39743720-39744133	chr14	+	39743921	39743994	True	NM_005930,NM_203355,NM_203356,NM_177452,NM_203354	chr14,chr14,chr14,chr14,chr14	+,+,+,-,+	CTAGE5,CTAGE5,CTAGE5,TRAPPC6B,CTAGE5	-7644,-7644,-8470,-104287,-9496
chr17:42401412-42401654	chr17	+	42401452	42401596	True	NM_001143780,NM_001144825,NM_016016	chr17,chr17,chr17	-,+,-	SLC25A39,RUNDC3A,SLC25A39	671,-15576,671
chr14:64854301-64854666	chr14	+	64854367	64854713	True	NM_005956,NR_033777	chr14,chr14	+,-	MTHFD1,TEX21P	45,-40038
chr19:43035237-43036496	chr19	+	43035346	43036288	True	NM_001410,NM_001184816,NM_001184815,NM_001184813,NM_001024912,NM_001712	chr19,chr19,chr19,chr19,chr19,chr19	+,-,-,-,-,-	MEGF8,CEACAM1,CEACAM1,CEACAM1,CEACAM1,CEACAM1	-205648,-2685,-2685,-2685,-2685,-2685
chr7:99096355-99096718	chr7	+	99096485	99096646	True	NM_145102,NM_014569,NM_032164	chr7,chr7,chr7	+,+,-	ZKSCAN5,ZKSCAN5,ZNF394	5626,5926,1286
chr12:128897766-128899619	chr12	+	128897974	128899561	True	NM_145648,NR_037406	chr12,chr12	-,+	SLC15A4,MIR3612	409036,-119388
chr13:20768285-20768804	chr13	+	20768378	20768714	True	NM_004004,NM_001190965	chr13,chr13	-,+	GJB2,ZMYM2	-1264,-235455
chr11:123065867-123066092	chr11	+	123065879	123065951	True	NR_027288,NM_024769	chr11,chr11	+,-	LOC341056,CLMP	-177656,106
chr14:24639729-24640056	chr14	+	24639747	24639857	True	NM_001048205,NM_024658,NM_005132,NM_006084	chr14,chr14,chr14,chr14	+,-,+,+	REC8,IPO4,REC8,IRF9	1376,18317,1376,-9376
chr17:43568550-43569081	chr17_ctg5_hap1	+	183629	183769	False	NM_014798,NR_027774,NR_027782,NM_001113738	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	-,-,-,+	PLEKHM1,PLEKHM1,PLEKHM1,ARL17A	-415,-415,-415,11951
chr17:43568550-43569081	chr17	+	43568558	43568698	True	NR_037772,NM_014798,NR_027774,NR_027782	chr17,chr17,chr17,chr17	+,-,-,-	CRHR1,PLEKHM1,PLEKHM1,PLEKHM1	129011,-412,-412,-412
chr6:160387197-160388154	chr6	+	160387325	160388201	True	NM_000876,NM_030752	chr6,chr6	+,-	IGF2R,TCP1	1929,-176590
chrX:40446718-40448532	chrX	+	40446718	40448332	True	NM_005765,NM_144970	chrX,chrX	+,-	ATP6AP2,CXorf38	-6553,58537
chr9:138413440-138414038	chr9	+	138413499	138413994	True	NM_144654,NM_002297	chr9,chr9	-,+	C9orf116,LCN1	-21738,-264
chr9:138413440-138414038	chr9	+	136185221	136185271	False	NM_000972,NM_006753	chr9,chr9	+,-	RPL7A,SURF6	29797,17826
chr2:39004172-39004895	chr2	+	39004416	39004775	True	NM_001195446,NM_024775	chr2,chr2	-,+	SRSF7,GEMIN6	-25780,551
chr2:243029364-243030330	chr2	+	243029549	243030286	True	NM_005018	chr2	-	PDCD1	-228491
chr1:165667120-165667366	chr1	+	165667340	165667414	True	NM_000696,NR_036683	chr1,chr1	-,+	ALDH9A1,LOC440700	536,572
chr3:122604777-122605911	chr3	+	122605002	122605954	True	NM_024610,NR_024618	chr3,chr3	-,+	HSPBAP1,LOC100129550	-92352,-28
chr2:136875921-136876650	chr2	+	136875999	136876583	True	NM_001008540,NM_003467,NM_014607	chr2,chr2,chr2	-,-,+	CXCR4,CXCR4,UBXN4	-2186,-274,-376861
chr1:145311399-145313083	chr1	+	145311802	145312231	True	NM_032305,NM_001039703	chr1,chr1	-,+	POLR3GL,NBPF10	158209,-18482
chr12:6799942-6801535	chr12	+	6800276	6801507	True	NM_001039917,NM_001039916,NM_001039919,NM_001135734,NM_001039920,NM_001039918,NM_133476,NM_001164094,NM_153685	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,-,-,-,-,-,-,+,-	ZNF384,ZNF384,ZNF384,ZNF384,ZNF384,ZNF384,ZNF384,COPS7A,C12orf53	-1607,-2451,-1607,-1600,-1607,-1749,-1749,31642,8355
chr7:148935945-148936628	chr7	+	148936030	148936594	True	NM_012256,NM_001001661	chr7,chr7	+,-	ZNF212,ZNF425	147,-112592
chr5:52296822-52297561	chr5	+	52297053	52297400	True	NM_002203,NM_004531	chr5,chr5	+,-	ITGA2,MOCS2	-11956,107982
chr5:132010098-132010700	chr5	+	132010135	132010657	True	NM_007054,NM_172348,NM_000589	chr5,chr5,chr5	-,+,+	KIF3A,IL4,IL4	62658,-813,-813
chr3:9790715-9791042	chr3	+	9790835	9791091	True	NM_016826,NM_016827,NM_016820,NM_016821,NM_016828,NM_016829,NM_016819,NM_003656,NM_002542	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,+,+,+,-,+	OGG1,OGG1,OGG1,OGG1,OGG1,OGG1,OGG1,CAMK1,OGG1	536,536,536,536,536,536,536,20627,536
chr9:5437993-5439478	chr9	+	5438036	5439264	True	NM_014143,NM_018465	chr9,chr9	+,-	CD274,C9orf46	11238,-176
chr19:11650139-11650694	chr19	+	11650178	11650464	True	NM_016581,NM_001299	chr19,chr19	-,+	ECSIT,CNN1	-10191,-650
chr13:70607910-70608264	chr13	+	70608051	70608290	True	NR_002717,NM_020866	chr13,chr13	+,-	ATXN8OS,KLHL1	73054,74394
chr2:61697101-61697319	chr2	+	61697106	61697294	True	NM_014709,NM_152392	chr2,chr2	-,+	USP34,AHSA2	605,-292609
chr10:120102939-120104135	chr10	+	120102949	120103860	True	NM_022063,NM_001134672,NR_026940	chr10,chr10,chr10	-,-,+	C10orf84,C10orf84,CASC2	-1110,-1110,-296668
chr5:73937277-73937659	chr5	+	73937310	73937667	True	NM_003633,NM_000521	chr5,chr5	-,+	ENC1,HEXB	-61,43301
chrX:46938227-46938467	chrX	+	46938251	46938341	True	NM_004683,NM_152869,NM_001135998	chrX,chrX,chrX	+,+,-	RGN,RGN,NDUFB11	-529,-529,65804
chr3:32727226-32727725	chr3	+	32727242	32727763	True	NM_016141,NM_015442	chr3,chr3	-,+	DYNC1LI1,CNOT10	-114876,-596
chr19:29380215-29380669	chr19	+	29380281	29380691	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	75346,323495
chr2:61991032-61991419	chr2	+	61991047	61991379	True	NM_001201543,NM_152516	chr2,chr2	-,+	FAM161A,COMMD1	89949,141423
chr17:77730424-77732061	chr17	+	77730602	77731735	True	NM_020649,NM_032647	chr17,chr17	-,+	CBX8,CBX2	39239,20241
chr19:38795146-38795520	chr19	+	38795238	38795552	True	NM_033557,NM_033520	chr19,chr19	-,+	YIF1B,C19orf33	5007,-485
chr7:73273012-73273788	chr7	+	73273238	73273678	True	NM_152559,NM_182504	chr7,chr7	-,+	WBSCR27,WBSCR28	-16383,1810
chrX:70474561-70476194	chrX	+	70474750	70476139	True	NM_001171163,NM_005096,NM_001145408,NM_201599,NM_001171162	chrX,chrX,chrX,chrX,chrX	-,-,+,-,-	ZMYM3,ZMYM3,NONO,ZMYM3,ZMYM3	-251,-251,26902,-712,-213
chr11:71247920-71248793	chr11	+	71248267	71248757	True	NM_021046,NM_001005405	chr11,chr11	+,-	KRTAP5-8,KRTAP5-11	313,45214
chr17:41423942-41424508	chr17	+	41424210	41424454	True	NR_027412,NM_001661	chr17,chr17	-,+	LOC100130581,ARL4D	41862,51898
chr13:41054859-41055720	chr13	+	41054866	41055632	True	NR_024505,NR_024507,NR_024506,NM_014252	chr13,chr13,chr13,chr13	-,-,-,+	LOC646982,LOC646982,LOC646982,SLC25A15	87,87,87,307914
chr5:141258748-141259579	chr5	+	141258819	141259541	True	NM_001142603,NM_032420,NM_002587	chr5,chr5,chr5	+,-,-	KIAA0141,PCDH1,PCDH1	43843,-875,-875
chr19:8386270-8386509	chr19	+	8386298	8386536	True	NM_005001,NM_001031	chr19,chr19	-,+	NDUFA7,RPS28	-18,17
chr11:85433375-85434482	chr11	+	85433505	85434527	True	NM_001162952,NM_206927,NM_206928,NM_206929,NM_206930,NM_032379,NM_032273	chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,-,-,+	SYTL2,SYTL2,SYTL2,SYTL2,SYTL2,SYTL2,TMEM126A	-3122,3034,3034,-3309,-3122,-7714,-74598
chr8:102218927-102219422	chr8	+	102218933	102219440	True	NM_001042511,NM_001042510,NM_016096,NR_033962	chr8,chr8,chr8,chr8	-,-,-,+	ZNF706,ZNF706,ZNF706,FLJ42969	-1060,-973,-973,-154704
chr4:166030165-166030704	chr4	+	166030166	166030458	True	NM_001100389,NM_152620	chr4,chr4	-,+	TMEM192,TRIM60	3630,-77075
chr15:63893258-63893671	chr15	+	63893296	63893476	True	NR_034080,NM_203373	chr15,chr15	-,+	LOC100130855,FBXL22	-270,-3795
chr19:56878577-56879624	chr19	+	56878851	56879609	True	NR_003127,NM_144690,NR_024057,NR_024056,NR_024055,NR_033418	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+	ZNF542,ZNF582,ZNF542,ZNF542,ZNF542,ZNF542	64,25330,86,86,86,86
chr14:105558726-105558945	chr14	+	105558871	105558963	True	NM_174891,NM_013345	chr14,chr14	+,-	C14orf79,GPR132	-106306,-27117
chr12:113797707-113798087	chr12	+	113797713	113798135	True	NM_001159727,NM_173542,NM_024959	chr12,chr12,chr12	+,+,-	PLBD2,PLBD2,SLC24A6	-1393,-1393,-24788
chr6:108394535-108395431	chr6	+	108394546	108395276	True	NM_003269,NM_014028	chr6,chr6	+,-	NR2E1,OSTM1	91938,723
chr5:153856104-153856309	chr5	+	153856115	153856303	True	NM_004821,NR_024084	chr5,chr5	-,+	HAND1,SAP30L	1571,-30649
chr18:60110186-60111244	chr18	+	60110209	60111281	True	NM_176787,NM_017742	chr18,chr18	-,+	PIGN,ZCCHC2	-255920,79376
chr7:128168665-128169155	chr7	+	128168863	128169195	True	NM_183243,NM_018396	chr7,chr7	-,+	IMPDH1,METTL2B	-118827,-52131
chr4:80986817-80988164	chr4	+	80986843	80988042	True	NM_020226,NM_001145794,NM_058172	chr4,chr4,chr4	+,-,-	PRDM8,ANTXR2,ANTXR2	118381,6488,6488
chr1:36550911-36551414	chr1	+	36550955	36551463	True	NM_017825,NM_005202,NM_014466	chr1,chr1,chr1	+,-,+	ADPRHL2,COL8A2,TEKT2	2989,14437,-1330
chr19:50936091-50936701	chr19	+	50936144	50936606	True	NM_004533,NM_138411	chr19,chr19	+,-	MYBPC2,FAM71E1	-35,43447
chr12:49959383-49960205	chr12	+	49959411	49960161	True	NM_006337,NM_012284,NM_001012300	chr12,chr12,chr12	-,+,-	MCRS1,KCNH3,MCRS1	1800,-26522,111
chr3:166551031-166551985	chr3	+	166551354	166551906	True	NM_001122752,NM_001199202	chr3,chr3	+,-	SERPINI1,ZBBX	901525,546215
chr19:52267560-52269263	chr19	+	52267681	52269079	True	NM_002029,NM_001462,NM_001005738	chr19,chr19,chr19	-,+,+	FPR1,FPR2,FPR2	-12531,-1091,-3280
chr19:8275962-8276308	chr19	+	8275978	8276340	True	NM_024552,NM_032447	chr19,chr19	+,-	LASS4,FBN3	-1812,-63593
chr1:209598647-209600147	chr1	+	209598730	209600026	True	NR_029622,NM_001104548,NR_036213	chr1,chr1,chr1	+,+,-	MIR205,LOC642587,MIR4260	5451,2141,196879
chr6:130340704-130340929	chr6	+	130340843	130340965	True	NM_001007102,NM_032438,NM_001010876	chr6,chr6,chr6	+,+,-	L3MBTL3,L3MBTL3,C6orf191	-1167,-1167,-158427
chr9:139605497-139605870	chr9	+	139605708	139605794	True	NM_152421,NR_002975	chr9,chr9	+,-	FAM69B,SNORA43	1229,14945
chr3:56500879-56501283	chr3	+	56500879	56501243	True	NM_015576,NM_001012506	chr3,chr3	-,+	ERC2,CCDC66	1198,89940
chr4:2967259-2967860	chr4	+	2967269	2967766	True	NM_003703,NM_182982,NM_001004056,NM_001004057	chr4,chr4,chr4,chr4	-,+,+,+	NOP14,GRK4,GRK4,GRK4	-2151,-1977,-1977,-1977
chr16:67881623-67882274	chr16	+	67881711	67882191	True	NM_025082,NM_020457,NM_005796	chr16,chr16,chr16	-,+,+	CENPT,THAP11,NUTF2	-350,-5549,-943
chr2:236404886-236405212	chr2	+	236404928	236405238	True	NM_014914,NM_001037131,NM_001485	chr2,chr2,chr2	+,+,-	AGAP1,AGAP1,GBX2	-2243,-2243,671464
chr1:21503459-21503685	chr1	+	21503480	21503598	True	NM_001198801,NM_001198803,NM_001198802,NM_032264	chr1,chr1,chr1,chr1	-,-,-,+	EIF4G3,EIF4G3,EIF4G3,NBPF3	-99,-2229,-99,263032
chr15:34726274-34726549	chr15	+	34726402	34726584	True	NM_175741,NR_027409	chr15,chr15	+,-	C15orf55,GOLGA8A	-88387,3133
chr15:34726274-34726549	chr15	+	34872511	34872669	False	NM_175741,NR_027410	chr15,chr15	+,-	C15orf55,GOLGA8B	-234496,3152
chr9:130692113-130692596	chr9	+	130692337	130692625	True	NM_001135219,NM_001018078,NM_173492,NM_003863	chr9,chr9,chr9,chr9	-,+,-,-	PIP5KL1,FPGS,PIP5KL1,DPM2	501,-126880,-2567,8188
chr17:62501198-62501494	chr17	+	62501202	62501439	True	NM_138363,NM_007215,NM_004396	chr17,chr17,chr17	+,-,-	CCDC45,POLG2,DDX5	1718,-8018,1100
chr16:18798308-18799969	chr16	+	18798743	18799776	True	NM_001030009,NM_001019,NM_024847	chr16,chr16,chr16	-,-,+	RPS15A,RPS15A,TMC7	1937,1937,195479
chrX:40125062-40126051	chrX	+	40125391	40126061	True	NM_001123384,NM_005765	chrX,chrX	-,+	BCOR,ATP6AP2	-88809,314154
chr3:48887956-48889049	chr3	+	48888359	48889094	True	NM_006321,NM_004157	chr3,chr3	+,-	ARIH2,PRKAR2A	67186,-3089
chr9:35729622-35731324	chr9	+	35729681	35731351	True	NM_006289,NM_006368	chr9,chr9	-,+	TLN1,CREB3	1091,965
chr6:138026162-138027040	chr6	+	138026222	138026961	True	NM_175747,NM_006290	chr6,chr6	-,+	OLIG3,TNFAIP3	-210691,161619
chr15:90295049-90295993	chr15	+	90295054	90295990	True	NM_018670,NM_001039958	chr15,chr15	-,+	MESP1,MESP2	-514,23598
chr22:28328149-28329729	chr22	+	28328451	28329681	True	NR_036169,NR_036170	chr22,chr22	-,+	MIR3199-1,MIR3199-2	-11851,-11989
chr3:197273397-197274531	chr3	+	197273399	197274570	True	NM_203314,NM_004051,NM_001011537	chr3,chr3,chr3	-,-,+	BDH1,BDH1,FYTTD1	8339,8339,201853
chr17:42788152-42788512	chr17	+	42788269	42788347	True	NM_145663,NM_144609,NM_025104,NR_036623	chr17,chr17,chr17,chr17	+,-,+,+	DBF4B,CCDC43,DBF4B,DBF4B	-2347,-21104,-2347,-2347
chr8:86262759-86263899	chr8	+	86262769	86263755	True	NM_005181,NM_001164830	chr8,chr8	+,-	CA3,CA1	87300,-8826
chr3:136473089-136473345	chr3	+	136473202	136473265	True	NM_001097599,NM_005862	chr3,chr3	+,-	TMEM22,STAG1	64595,-1957
chr17:6337465-6338193	chr17	+	6337630	6338091	True	NM_019013,NM_014336,NM_001195228,NM_001033054,NM_001033055	chr17,chr17,chr17,chr17,chr17	+,-,+,-,-	FAM64A,AIPL1,FAM64A,AIPL1,AIPL1	9643,478,9643,478,478
chr1:161061182-161062476	chr1	+	161061350	161062444	True	NR_033386,NR_033385,NM_030916,NM_001007255,NM_152366	chr1,chr1,chr1,chr1,chr1	+,+,-,+,+	KLHDC9,KLHDC9,PVRL4,KLHDC9,KLHDC9	5706,5706,-1965,5736,5736
chr19:51923385-51924786	chr19	+	51923385	51924559	True	NM_033130,NM_001171156,NM_001171157,NR_033235,NM_001171161,NM_001171160,NM_001171158,NM_001171159	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,+,-,-,-,-	SIGLEC10,SIGLEC10,SIGLEC10,LOC100129083,SIGLEC10,SIGLEC10,SIGLEC10,SIGLEC10	-2328,-2328,-2328,-4278,-2328,-2328,-2328,-2328
chr19:54374407-54375193	chr19	+	54374685	54375097	True	NM_138373,NM_144687,NM_001020821,NM_001020820,NM_001020818,NM_001020819	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+	MYADM,NLRP12,MYADM,MYADM,MYADM,MYADM	-3599,-47037,-2076,-5125,-1955,-3599
chrX:70519159-70520233	chrX	+	70519161	70520177	True	NM_001171162,NM_012278	chrX,chrX	-,+	ZMYM3,ITGB1BP2	-44114,1450
chr18:75702427-75702797	chr18	+	75702428	75702826	True	NM_001480,NM_001025100	chr18,chr18	+,-	GALR1,MBP	-740471,-857654
chr7:72682449-72682734	chr7	+	72682552	72682626	True	NR_002164,NR_003186	chr7,chr7	-,+	GTF2IRD2P1,NCF1B	3082,-47929
chr7:72682449-72682734	chr7	-	74539734	74539788	False	NM_001003795,NR_003187	chr7,chr7	+,-	GTF2IRD2B,NCF1C	-31438,48078
chr7:136397524-136398329	chr7	+	136397557	136398301	True	NM_002825,NM_001006627	chr7,chr7	-,+	PTN,CHRM2	630295,155097
chr4:72089871-72090396	chr4	+	72089956	72090428	True	NM_002092,NM_001134742	chr4,chr4	-,+	GRSF1,SLC4A4	-384329,-37004
chr16:31022229-31022754	chr16	+	31022252	31022644	True	NM_052874,NM_004604	chr16,chr16	-,+	STX1B,STX4	-423,22258
chr2:56149965-56150374	chr2	+	56149990	56150414	True	NM_001080433,NM_001039348,NM_001039349	chr2,chr2,chr2	+,-,-	CCDC85A,EFEMP1,EFEMP1	260843,934,934
chr22:30868836-30869850	chr22	+	30868953	30869614	True	NR_001580,NM_174975,NM_016498	chr22,chr22,chr22	-,-,+	SDC4P,SEC14L3,MTFP1	8180,-919,-47393
chr9:80262302-80262526	chr9	+	80262301	80262362	True	NM_004297,NM_033305	chr9,chr9	-,+	GNA14,VPS13A	921,-469991
chr12:107347177-107348773	chr12	+	107347619	107348476	True	NM_001033050,NM_152261	chr12,chr12	-,+	MTERFD3,C12orf23	32504,1067
chr2:68289527-68289835	chr2	+	68289548	68289682	True	NM_001190265,NM_173177,NM_006333,NM_001190263,NM_020143	chr2,chr2,chr2,chr2,chr2	-,-,-,-,+	C1D,C1D,C1D,C1D,PNO1	529,529,529,529,95322
chr16:75251323-75251673	chr16	+	75251362	75251572	True	NM_001025200,NM_001906	chr16,chr16	-,+	CTRB2,CTRB1	-10290,1311
chr11:3399827-3400058	chr11	+	3399853	3400019	True	NM_001130519,NM_001130520,NM_007152,NR_024248	chr11,chr11,chr11,chr11	-,-,-,+	ZNF195,ZNF195,ZNF195,LOC650368	479,479,479,2171
chr17:40830747-40831363	chr17	+	40830825	40831135	True	NM_016602,NM_024927,NM_003632	chr17,chr17,chr17	-,-,+	CCR10,PLEKHH3,CNTNAP1	2760,-1777,3496
chr16:56593922-56594644	chr16	+	56594249	56594611	True	NM_031885,NM_032935	chr16,chr16	-,+	BBS2,MT4	-40241,4349
chr11:4598900-4600032	chr11	+	4599147	4600073	True	NM_001005170,NM_144663	chr11,chr11	+,-	OR52I2,C11orf40	7947,-97
chr1:205818482-205818897	chr1	+	205818497	205818753	True	NM_152491,NM_181644	chr1,chr1	-,+	PM20D1,MFSD4	581,-280436
chr20:46988974-46989822	chr20	+	46989039	46989824	True	NR_026958,NM_020820	chr20,chr20	+,-	LOC284749,PREX1	-436,454653
chr16:28250727-28251000	chr16	+	28250791	28250985	True	NM_015171,NM_001024401	chr16,chr16	-,+	XPO6,SBK1	-27601,52854
chr5:178976064-178976668	chr5	+	178976157	178976583	True	NM_005520,NM_025158	chr5,chr5	-,+	HNRNPH1,RUFY1	74197,987
chr15:101422397-101422652	chr15	+	101422399	101422595	True	NM_001040616,NM_000693	chr15,chr15	-,+	LINS,ALDH1A3	-279954,-2441
chr17:48227885-48228191	chr17	+	48228059	48228239	True	NM_032595,NM_000023	chr17,chr17	-,+	PPP1R9B,SGCA	-182,15126
chr1:154244242-154244790	chr1	+	154244477	154244743	True	NM_001018837,NM_138740,NM_006118	chr1,chr1,chr1	+,-,+	HAX1,C1orf43,HAX1	295,-51204,295
chr4:68424643-68426461	chr4	+	68424706	68426086	True	NM_012108,NM_001812	chr4,chr4	+,-	STAP1,CENPC1	-322,-13450
chr11:63258754-63259111	chr11	+	63258848	63259145	True	NM_054108,NM_001146729,NM_001146728,NM_001142535	chr11,chr11,chr11,chr11	-,-,-,+	HRASLS5,HRASLS5,HRASLS5,LGALS12	-168,-168,-168,14378
chr6:22292850-22294740	chr6	+	22292850	22294669	True	NM_001163558,NM_000948,NM_138574	chr6,chr6,chr6	-,-,+	PRL,PRL,HDGFL1	8464,3112,275008
chr6:2766897-2767295	chr6	+	2766899	2767349	True	NM_001012418,NM_020135,NM_130395	chr6,chr6,chr6	-,+,+	MYLK4,WRNIP1,WRNIP1	-15745,-1291,-1291
chr17:28564973-28565177	chr17	+	28564982	28565088	True	NR_029945,NM_001045	chr17,chr17	+,-	MIR423,SLC6A4	-120936,-2028
chr17:72967509-72968225	chr17	+	72967514	72968260	True	NM_014603,NM_030630	chr17,chr17	+,-	CDR2L,C17orf28	15466,690
chr3:51890817-51891509	chr3	+	51891067	51891499	True	NM_001145059,NM_203424	chr3,chr3	-,+	IQCF5,IQCF2	18151,4145
chr1:10054828-10055263	chr1	+	10055086	10055186	True	NM_032368,NM_052960	chr1,chr1	-,+	LZIC,RBP7	-52260,2068
chr2:36817665-36819434	chr2	+	36818073	36819396	True	NM_001177972,NM_005102,NM_001042548	chr2,chr2,chr2	+,-,-	VIT,FEZ2,FEZ2	104436,5993,5993
chr16:56666580-56667269	chr16	+	56666581	56667299	True	NM_005946,NM_175617,NR_036677,NM_176870,NM_005950	chr16,chr16,chr16,chr16,chr16	+,+,+,+,-	MT1A,MT1E,MT1JP,MT1M,MT1G	5278,-7047,2351,-98,34728
chr16:3287921-3289049	chr16	+	3288190	3288868	True	NR_002169,NM_003454,NM_001145447,NM_001145446,NM_198087,NM_001145448,NM_198088	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,-,-,-,-	OR1F2P,ZNF200,ZNF200,ZNF200,ZNF200,ZNF200,ZNF200	-22683,-3004,-3004,-2733,-2733,-2734,-2734
chr9:33274736-33275727	chr9	+	33275028	33275705	True	NM_004323,NM_016410	chr9,chr9	-,+	BAG1,CHMP5	-10269,-10209
chr7:98247832-98248537	chr7	+	98247931	98248547	True	NM_002523,NM_018842	chr7,chr7	+,-	NPTX2,BAIAP2L1	-1385,-217504
chr19:17969056-17969641	chr19	+	17969360	17969427	True	NM_000980,NM_000215,NR_001593,NR_000012	chr19,chr19,chr19,chr19	+,-,+,+	RPL18A,JAK3,RPL18AP3,SNORA68	1303,-10519,1299,3969
chr20:43992342-43992959	chr20	+	43992383	43992993	True	NM_014477,NM_033542,NR_003189,NM_001099791,NM_001197129	chr20,chr20,chr20,chr20,chr20	-,+,+,+,+	TP53TG5,SYS1,SYS1-DBNDD2,SYS1,SYS1	14014,-694,-625,-694,-1857
chr14:24640056-24640784	chr14	+	24640433	24640832	True	NM_001048205,NM_024658,NM_005132	chr14,chr14,chr14	+,-,+	REC8,IPO4,REC8	401,17342,401
chr14:54974928-54976310	chr14	+	54974978	54976248	True	NM_004124,NM_006568	chr14,chr14	-,+	GMFB,CGRRF1	-19234,338
chr19:40929792-40930599	chr19	+	40930203	40930621	True	NM_020971,NM_013376	chr19,chr19	+,-	SPTBN4,SERTAD1	42504,1361
chr10:82049166-82050145	chr10	+	82049181	82049973	True	NM_000429,NM_032372	chr10,chr10	-,+	MAT1A,DYDC2	19,66584
chr14:54896331-54898137	chr14	+	54896480	54897253	True	NM_005776,NM_005192	chr14,chr14	-,+	CNIH,CDKN3	10950,-32861
chr22:50050271-50050718	chr22	+	50050488	50050730	True	NR_026997,NM_014838	chr22,chr22	-,+	C22orf34,ZBED4	510,196766
chr6:43614307-43615726	chr6	+	43614971	43615594	True	NM_152732,NM_019096,NM_001193341	chr6,chr6,chr6	+,-,+	RSPH9,GTPBP2,RSPH9	-2256,-18035,-2256
chr17:7232750-7233655	chr17	+	7232814	7233552	True	NM_001005408,NM_032442,NM_014716	chr17,chr17,chr17	-,-,+	NEURL4,NEURL4,ACAP1	-176,-176,6295
chr1:21877779-21878309	chr1	+	21877802	21878157	True	NM_001177520,NM_001145658	chr1,chr1	+,-	ALPL,RAP1GAP	-42003,100242
chr19:12819771-12820438	chr19	+	12820184	12820295	True	NR_002751,NM_004317	chr19,chr19	-,+	SNORD41,ASNA1	-2852,28010
chr18:3010060-3011048	chr18	+	3010130	3011064	True	NM_014646,NM_032048	chr18,chr18	-,+	LPIN2,EMILIN2	931,-163161
chr17:65823938-65824206	chr17	+	65823942	65824048	True	NM_004459,NM_182641,NM_181655	chr17,chr17,chr17	+,+,-	BPTF,BPTF,C17orf58	-2213,-2213,165771
chr2:172864974-172865288	chr2	+	172865001	172865288	True	NM_199227,NM_004405	chr2,chr2	+,-	METAP1D,DLX2	-248,102247
chrX:41550831-41552721	chrX	+	41551300	41552475	True	NM_005300,NM_001126054,NM_001097579	chrX,chrX,chrX	+,-,+	GPR34,CASK,GPR34	-3129,229863,-3129
chr1:161627143-161628274	chr1	+	161627193	161628322	True	NM_004001,NM_001002273,NM_001190828,NM_001002274,NM_001002275,NM_000570,NR_002595	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-,-	FCGR2B,FCGR2B,FCGR2B,FCGR2B,FCGR2B,FCGR3B,RPL31P11	4582,4582,4582,4582,4582,-26035,26777
chr1:161627143-161628274	chr1	+	161545353	161546482	False	NM_201563,NM_001127596	chr1,chr1	+,-	FCGR2C,FCGR3A	4646,-24940
chr19:39882519-39882763	chr19	+	39882681	39882743	True	NM_019088,NM_017592	chr19,chr19	-,+	PAF1,MED29	-1002,-770
chr21:38445183-38445423	chr21	+	38445187	38445347	True	NM_003316,NM_001001894,NM_153682,NR_028352,NM_153681	chr21,chr21,chr21,chr21,chr21	+,+,-,-,-	TTC3,TTC3,PIGP,PIGP,PIGP	9899,223,161,161,-84
chr2:73872205-73873468	chr2	+	73872209	73872475	True	NM_003960,NR_003683	chr2,chr2	-,+	NAT8,ALMS1P	-2672,-217
chr4:156302216-156302706	chr4	+	156302296	156302742	True	NM_000910,NM_001039580	chr4,chr4	+,-	NPY2R,MAP9	-172574,-4174
chr19:41946373-41948029	chr19	+	41946505	41947817	True	NM_001167869,NM_001167868,NM_018035,NM_001167867,NM_001167871,NM_001167870,NR_030765,NM_001130514	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,+	ATP5SL,ATP5SL,ATP5SL,ATP5SL,ATP5SL,ATP5SL,ATP5SL,C19orf69	-662,-1024,-662,-1024,-662,-662,-662,1245
chr3:16554125-16554358	chr3	+	16554207	16554397	True	NM_138381,NM_015150	chr3,chr3	+,-	OXNAD1,RFTN1	-247591,875
chr11:118437262-118438213	chr11	+	118437503	118437604	True	NM_020153,NM_001142281,NM_001168618,NM_001655	chr11,chr11,chr11,chr11	-,+,-,+	IFT46,ARCN1,IFT46,ARCN1	-712,5497,-712,5497
chr10:135124603-135125313	chr10	+	135124751	135125357	True	NM_006659,NM_145806	chr10,chr10	-,+	TUBGCP2,ZNF511	-2107,-2382
chr19:21542533-21543346	chr19	+	21542726	21543249	True	NR_027130,NM_021269	chr19,chr19	+,-	ZNF738,ZNF708	-1042,-30514
chr9:34593368-34594296	chr9	+	34593420	34594281	True	NR_024369,NM_001842,NM_147164	chr9,chr9,chr9	+,-,-	LOC415056,CNTFR,CNTFR	-25461,-3698,-3698
chr19:16651667-16652352	chr19	+	16651797	16652221	True	NM_006387,NM_032207	chr19,chr19	-,+	CHERP,C19orf44	1094,-44650
chr4:115543745-115544625	chr4	+	115544079	115544605	True	NM_022569,NM_003360	chr4,chr4	-,+	NDST4,UGT8	490477,-607
chr14:52518293-52518557	chr14	+	52518301	52518589	True	NM_007361,NM_016039	chr14,chr14	-,+	NID2,C14orf166	17408,-62124
chr19:49499166-49500600	chr19	+	49499449	49500530	True	NR_027763,NM_006666,NM_002103,NM_001161587	chr19,chr19,chr19,chr19	-,+,-,-	GYS1,RUVBL2,GYS1,GYS1	-2839,-2344,-2839,-2839
chr13:49963033-49964117	chr13	+	49963035	49964014	True	NM_031915,NM_030925	chr13,chr13	+,-	SETDB2,CAB39L	54414,11778
chr8:144979813-144980154	chr8	+	144979870	144980022	True	NM_000837,NM_031308	chr8,chr8	+,-	GRINA,EPPK1	84203,-32436
chr1:204381320-204381923	chr1	+	204381320	204381502	True	NM_001204171,NM_032833	chr1,chr1	+,-	MDM4,PPP1R15B	104004,-376
chr3:48233966-48234461	chr3	+	48234278	48234468	True	NM_001789,NM_004345,NM_201567	chr3,chr3,chr3	-,+,-	CDC25A,CAMP,CDC25A	-4477,30393,-4477
chr19:5784998-5785348	chr19	+	5785199	5785259	True	NM_020175,NM_001134316,NM_001161619,NM_004558	chr19,chr19,chr19,chr19	-,-,-,+	DUS3L,PRR22,DUS3L,NRTN	6040,-423,6040,38558
chr7:44144739-44145976	chr7	+	44144991	44145945	True	NM_001129,NM_001127218	chr7,chr7	+,-	AEBP1,POLD2	-1082,17252
chr22:32839970-32841329	chr22	+	32840233	32840975	True	NM_174932,NM_012179	chr22,chr22	-,+	BPIL2,FBXO7	12448,29731
chr8:32451757-32452675	chr8	+	32451756	32452640	True	NM_001159999,NM_001159995,NM_032664,NM_001160001	chr8,chr8,chr8,chr8	+,+,-,+	NRG1,NRG1,FUT10,NRG1	703,703,878074,703
chr17:18086743-18087053	chr17	+	18086793	18087069	True	NM_002018,NM_017758	chr17,chr17	-,+	FLII,ALKBH5	75036,23
chr19:19432093-19432326	chr19	+	19432189	19432259	True	NM_172231,NM_015329	chr19,chr19	-,+	SUGP1,MAU2	-882,-610
chr11:534343-534758	chr11	+	534563	534725	True	NM_176795,NM_001130442,NM_005343,NM_198075	chr11,chr11,chr11,chr11	-,-,-,+	HRAS,HRAS,HRAS,LRRC56	875,875,875,2796
chr2:215340419-215341229	chr2	+	215340501	215341258	True	NM_000465,NM_001080500	chr2,chr2	-,+	BARD1,VWC2L	333221,-64098
chr13:73385153-73387002	chr13	+	73385312	73386365	True	NM_006346,NM_014953	chr13,chr13	+,-	PIBF1,DIS3	-29140,-28968
chr16:850316-850519	chr16	+	850338	850538	True	NM_001013638,NM_016541	chr16,chr16	+,-	PRR25,GNG13	4904,245
chr4:78740395-78740673	chr4	+	78740406	78740468	True	NM_020236,NM_144571	chr4,chr4	+,-	MRPL1,CNOT6L	43336,126
chr20:47805662-47805919	chr20	+	47805776	47805890	True	NM_017454,NM_017895,NM_017452,NM_017453,NM_004602,NM_001037328	chr20,chr20,chr20,chr20,chr20,chr20	-,+,-,-,-,-	STAU1,DDX27,STAU1,STAU1,STAU1,STAU1	-872,29941,-872,-872,-872,-872
chr22:46441374-46442415	chr22	+	46441425	46442373	True	NM_018280,NR_027034,NR_027036	chr22,chr22,chr22	-,+,-	C22orf26,LOC150381,LOC100271722	7701,7352,-677
chr8:38760700-38761336	chr8	+	38760699	38761365	True	NM_021623,NM_001024380	chr8,chr8	+,-	PLEKHA2,TM2D2	-2000,92726
chrX:53346189-53348037	chrX	+	53346203	53347936	True	NM_001111125,NM_144968	chrX,chrX	-,+	IQSEC2,RIBC1	2636,101902
chr6:112375285-112375498	chr6	+	112375306	112375440	True	NM_016262,NM_198239,NM_003880	chr6,chr6,chr6	-,+,+	TUBE1,WISP3,WISP3	33361,2,-79
chr15:25081216-25082809	chr15	+	25081302	25082437	True	NM_130838,NM_022808	chr15,chr15	-,+	UBE3A,SNRPN	568269,-12559
chr19:41100575-41101527	chr19	+	41100584	41101496	True	NM_001042544,NM_003573,NM_004756,NM_001042545	chr19,chr19,chr19,chr19	+,+,-,+	LTBP4,LTBP4,NUMBL,LTBP4	1644,-1563,95110,5780
chr5:176854175-176854977	chr5	+	176854263	176854993	True	NM_001004106,NM_000505,NM_001004105,NM_002082	chr5,chr5,chr5,chr5	+,-,+,+	GRK6,F12,GRK6,GRK6	-627,-17686,-627,-627
chr4:1008290-1008509	chr4	+	1008296	1008558	True	NM_001004358,NM_001004356,NM_021923,NM_213613	chr4,chr4,chr4,chr4	+,+,+,-	FGFRL1,FGFRL1,FGFRL1,SLC26A1	-2587,-2737,-2095,-21072
chr1:156123350-156123642	chr1	+	156123354	156123572	True	NM_001093725,NM_001193302,NM_001193301,NM_001193300,NM_022367	chr1,chr1,chr1,chr1,chr1	-,+,+,+,+	MEX3A,SEMA4A,SEMA4A,SEMA4A,SEMA4A	-71565,-36,-3670,-83,-83
chr16:3071580-3071786	chr16	+	3071632	3071826	True	NM_001142350,NM_024339,NM_017885,NM_001002017,NM_016639,NM_021195,NM_020982,NM_001002018	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,-,-,+,-,+,-	THOC6,THOC6,HCFC1R1,HCFC1R1,TNFRSF12A,CLDN6,CLDN9,HCFC1R1	2205,2205,2511,2511,-1370,-3444,-9226,2511
chr17:72613579-72614058	chr17	+	72613728	72614092	True	NM_152460,NM_181449	chr17,chr17	+,-	C17orf77,CD300E	-32722,5855
chr8:120859092-120861049	chr8	+	120859136	120860852	True	NM_024094,NM_022783	chr8,chr8	-,+	DSCC1,DEPTOR	7368,25047
chr12:571530-573268	chr12	+	571548	573161	True	NM_001042603,NM_173593	chr12,chr12	-,+	KDM5A,B4GALNT3	-72928,-2056
chr19:51869978-51870524	chr19	+	51869984	51870460	True	NM_001985,NM_152353,NR_033235,NM_005601	chr19,chr19,chr19,chr19	-,-,+,-	ETFB,CLDND2,LOC100129083,NKG7	-312,1847,48699,5550
chr5:132159055-132159421	chr5	+	132159148	132159468	True	NM_001172700,NM_175873,NM_133456	chr5,chr5,chr5	-,+,-	SHROOM1,ANKRD43,SHROOM1	7172,-10166,2584
chr3:46062668-46063001	chr3	+	46062669	46062941	True	NM_005283,NM_001024644,NM_006564	chr3,chr3,chr3	-,-,+	XCR1,XCR1,CXCR6	6088,6088,-77747
chr12:123942360-123942689	chr12	+	123942479	123942680	True	NM_022717,NM_180699,NM_145058	chr12,chr12,chr12	+,+,-	SNRNP35,SNRNP35,RILPL2	-26,1705,-21215
chr3:186857349-186857656	chr3	+	186857441	186857559	True	NM_052969,NM_153708	chr3,chr3	-,+	RPL39L,RTP1	-178,57714
chr1:153746878-153747430	chr1	+	153746916	153747296	True	NM_024330,NM_004515	chr1,chr1	+,-	SLC27A3,ILF2	471,-103437
chr9:136891051-136891279	chr9	+	136891050	136891196	True	NM_003371,NR_015427	chr9,chr9	-,+	VAV2,NCRNA00094	-33604,-540
chr11:67979908-67980123	chr11	+	67979908	67980060	True	NM_017635,NM_002335,NM_016028	chr11,chr11,chr11	-,+,-	SUV420H1,LRP5,SUV420H1	774,100047,774
chr9:130968523-130968950	chr9	+	130968536	130968910	True	NM_012127,NM_004408,NM_001005336,NM_001131015	chr9,chr9,chr9,chr9	-,+,+,-	CIZ1,DNM1,DNM1,CIZ1	-1874,-2924,-2924,-1874
chr17:27401142-27401705	chr17	+	27401182	27401700	True	NM_016518,NM_004740	chr17,chr17	+,-	PIPOX,TIAF1	-31315,977
chr4:154387651-154387951	chr4	+	154387786	154387858	True	NR_001562,NM_015196,NM_001131007	chr4,chr4,chr4	-,+,+	ANXA2P1,KIAA0922,KIAA0922	-157823,-339,-339
chr20:357955-358480	chr20	+	358103	358291	True	NM_021158,NM_144628	chr20,chr20	+,-	TRIB3,TBC1D20	3016,84946
chr12:6520694-6521862	chr12	+	6520731	6521209	True	NM_002342,NM_001159575	chr12,chr12	+,-	LTBR,SCNN1A	-27425,-34208
chr4:6781838-6782969	chr4	+	6781953	6782933	True	NM_001100590,NM_203462,NM_014743	chr4,chr4,chr4	+,-,+	KIAA0232,MRFAP1L1,KIAA0232	1525,-70347,1525
chr17:42584192-42584976	chr17	+	42584303	42584679	True	NM_001466,NM_001002909,NR_036474	chr17,chr17,chr17	+,-,-	FZD2,GPATCH8,GPATCH8	50132,-3346,-3346
chr7:95129276-95130925	chr7	+	95129374	95130797	True	NM_016116,NM_001018161	chr7,chr7	+,-	ASB4,PON2	-14216,-64990
chr22:17077891-17078443	chr7	-	152137833	152137921	False	NR_002935,NM_170606	chr7,chr7	+,-	FABP5P3,MLL3	-3904,-4743
chr22:17077891-17078443	chr22	+	17078066	17078154	True	NM_014406,NR_001591	chr22,chr22	-,+	CCT8L2,psiTPTE22	-4366,4646
chr10:30978109-30978439	chr10	+	30978328	30978478	True	NM_183058,NM_005204	chr10,chr10	-,+	LYZL2,MAP3K8	-59681,-255513
chr3:154797307-154797602	chr3	+	154797316	154797504	True	NM_000902,NM_007288,NR_037902,NM_007289,NM_007287	chr3,chr3,chr3,chr3,chr3	+,+,-,+,+	MME,MME,LOC100507537,MME,MME	51,448,214035,574,200
chr7:27497715-27498006	chr7	+	27497775	27497953	True	NM_001989,NM_152740	chr7,chr7	+,-	EVX1,HIBADH	-215662,204717
chrX:70336137-70337356	chrX	+	70337215	70337364	True	NM_000206,NM_005120	chrX,chrX	-,+	IL2RG,MED12	-5734,1041
chr12:24717160-24717415	chr12	+	24717204	24717444	True	NR_030625,NM_152989	chr12,chr12	+,-	MIR920,SOX5	-351900,-1824
chr1:60539479-60539930	chr1	+	60539601	60539939	True	NM_015888,NM_152377	chr1,chr1	+,-	HOOK1,C1orf87	-259119,-159
chr9:35693779-35695477	chr9	+	35693975	35695228	True	NM_001216,NM_003289,NM_213674	chr9,chr9,chr9	+,-,-	CA9,TPM2,TPM2	-20114,-3922,-3922
chr2:180726215-180726446	chr2	+	180726223	180726409	True	NM_152520,NR_031659,NM_182678	chr2,chr2,chr2	-,-,+	ZNF385B,MIR1258,UBE2E3	-1,-588,1118702
chrX:100332684-100333606	chrX	+	100332749	100333507	True	NM_021637,NM_024917	chrX,chrX	+,-	TMEM35,TRMT2B	328,-25644
chrX:73833400-73833977	chrX	+	73833399	73833952	True	NM_183353,NM_016120,NM_006517	chrX,chrX,chrX	-,-,+	RLIM,RLIM,SLC16A2	559,559,-192365
chr16:11834872-11835382	chr16	+	11834967	11835347	True	NM_003498,NM_015914	chr16,chr16	+,-	SNN,TXNDC11	-72736,1351
chr6:41299406-41300223	chr6	+	41299470	41300102	True	NM_001199510,NM_004828,NM_001199509,NM_018643	chr6,chr6,chr6,chr6	+,+,+,-	NCR2,NCR2,NCR2,TREM1	3425,3425,3425,-45013
chr11:118480943-118481247	chr11	+	118481088	118481158	True	NM_001144758,NM_001144759,NM_015157,NM_020153	chr11,chr11,chr11,chr11	+,+,+,-	PHLDB1,PHLDB1,PHLDB1,IFT46	-2833,-2833,-3926,-44297
chr6:133563400-133563872	chr6	+	133563413	133563861	True	NM_172105,NM_052831,NM_004100,NM_172103	chr6,chr6,chr6,chr6	+,-,+,+	EYA4,C6orf192,EYA4,EYA4	-969,-443666,-969,-969
chr17:38377117-38377923	chr17	+	38377346	38377683	True	NM_133264,NM_021724	chr17,chr17	+,-	WIPF2,NR1D1	-1823,-120373
chr14:91283298-91284328	chr14	+	91283546	91284195	True	NM_001010854,NM_001102366	chr14,chr14	-,+	TTC7B,C14orf159	-785,296161
chr10:21460003-21460741	chr10	+	21460308	21460788	True	NM_001173484,NM_001195627,NM_213569	chr10,chr10,chr10	-,+,-	NEBL,MLLT10,NEBL	2378,362312,2378
chr10:124537436-124538575	chr10	+	124537714	124538620	True	NM_022034,NR_003570	chr10,chr10	-,+	CUZD1,FLJ46361	67127,-21558
chr8:55051650-55052980	chr8	+	55051881	55052807	True	NM_014175,NM_006330	chr8,chr8	+,-	MRPL15,LYPLA1	-4159,-37304
chr5:56205905-56206129	chr5	+	56205981	56206167	True	NM_153706,NM_001171990,NM_152622	chr5,chr5,chr5	+,+,-	C5orf35,C5orf35,MIER3	-945,-945,41837
chr1:15851876-15852253	chr1	+	15851943	15852302	True	NM_015291,NM_032996,NM_001229	chr1,chr1,chr1	+,-,-	DNAJC16,CASP9,CASP9	1049,-658,-1003
chr2:30452681-30453649	chr2	+	30452734	30453600	True	NM_004304,NM_030915	chr2,chr2	-,+	ALK,LBH	-308257,796
chr1:28920326-28920556	chr1	+	28920438	28920508	True	NM_152304,NR_024127,NM_001193532	chr1,chr1,chr1	+,-,+	RAB42,SNHG12,RAB42	-1777,-12072,-1482
chr1:113616441-113617453	chr1	+	113616441	113617225	True	NM_003051,NM_014813	chr1,chr1	-,+	SLC16A1,LRIG2	-117466,-663
chrX:33134347-33136318	chrX	+	33134794	33136226	True	NM_004010,NM_152631	chrX,chrX	-,+	DMD,FAM47B	10382,1824686
chr13:99403302-99403929	chr13	+	99403484	99403892	True	NM_005073,NM_001144072	chr13,chr13	-,+	SLC15A1,UBAC2	1087,448786
chr19:45579404-45579611	chr19	+	45579505	45579577	True	NM_145288,NM_001007269,NM_001007270,NM_024707	chr19,chr19,chr19,chr19	-,+,+,+	ZNF296,GEMIN7,GEMIN7,GEMIN7	161,2952,2940,2952
chr17:76375179-76375626	chr17	+	76375192	76375460	True	NM_003955,NM_024419	chr17,chr17	-,+	SOCS3,PGS1	-19034,-508
chrX:73837873-73838996	chrX	+	73838038	73838661	True	NM_183353,NM_016120,NM_006517	chrX,chrX,chrX	-,-,+	RLIM,RLIM,SLC16A2	-3577,-3577,-197018
chrX:106047536-106047852	chrX	+	106047582	106047828	True	NM_198881,NM_017752,NM_001171706	chrX,chrX,chrX	+,+,-	TBC1D8B,TBC1D8B,RIPPLY1	-1722,-1722,98795
chr19:48826672-48827254	chr19	+	48826763	48827135	True	NM_144577,NM_001425	chr19,chr19	-,+	CCDC114,EMP3	-3431,1493
chr8:144948325-144948577	chr8	+	144948452	144948620	True	NM_000837,NM_031308	chr8,chr8	+,-	GRINA,EPPK1	115605,-1018
chr9:132081592-132081947	chr9	+	132081601	132081953	True	NM_001012715,NM_203434	chr9,chr9	+,-	C9orf106,IER5L	1341,-141061
chr12:124117415-124118167	chr12	+	124117508	124118126	True	NM_001414,NM_001516	chr12,chr12	-,+	EIF2B1,GTF2H3	247,254
chr17:2415397-2415608	chr17	+	2415413	2415621	True	NM_000430,NM_024086	chr17,chr17	+,-	PAFAH1B1,METTL16	81301,-213
chr5:34245284-34245937	chr5	+	34245377	34245443	True	NM_016568,NR_037951	chr5,chr5	+,-	RXFP3,C1QTNF3-AMACR	-308937,-120744
chr13:21713730-21714323	chr13	+	21713819	21714277	True	NM_001166017,NM_005870	chr13,chr13	-,+	SKA3,SAP18	36514,375
chr14:60336699-60337141	chr14	+	60336789	60336985	True	NM_021136,NM_022495	chr14,chr14	-,+	RTN1,C14orf135	622,221643
chr3:150802649-150803009	chr3	+	150802680	150802972	True	NM_053002,NM_174878	chr3,chr3	+,-	MED12L,CLRN1	1703,-111894
chr15:55880468-55880767	chr15	+	55880471	55880551	True	NM_001198784,NM_015617	chr15,chr15	+,-	FLJ27352,PYGO1	-179799,549
chr17:5389793-5390001	chr17	+	5389805	5390017	True	NM_016041,NM_024039	chr17,chr17	-,+	DERL2,MIS12	-311,229
chr18:9912987-9913644	chr18	+	9913049	9913691	True	NM_194434,NM_005134,NM_003574	chr18,chr18,chr18	+,-,+	VAPA,PPP4R1,VAPA	263,-298449,263
chr1:76257982-76259215	chr1	+	76257990	76259159	True	NM_004582,NR_003042,NM_080868,NR_002749,NR_002748,NM_002440	chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,+,+,+	RABGGTB,SNORD45C,ASB17,SNORD45A,SNORD45B,MSH4	-6162,-5291,139007,-4474,-2886,3470
chr9:133526837-133527306	chr9	+	133527143	133527349	True	NR_027440,NM_021619	chr9,chr9	-,+	LOC100272217,PRDM12	-72262,12631
chr11:36615031-36616219	chr11	+	36615221	36616171	True	NR_033666,NM_000536,NM_138787	chr11,chr11,chr11	-,-,+	RAG2,RAG2,C11orf74	3708,3708,60
chr16:68017341-68017874	chr16	+	68017359	68017829	True	NM_022357,NM_001129758,NM_017803	chr16,chr16,chr16	-,-,+	DPEP3,DPEP3,DUS2L	-2907,-2907,39374
chr20:55099105-55099689	chr20	+	55099404	55099600	True	NM_001012971,NM_080615,NM_001013646	chr20,chr20,chr20	+,-,+	C20orf106,GCNT7,C20orf107	184,1431,8701
chr19:54787040-54787943	chr19	+	54787181	54787860	True	NM_001013,NM_005874,NM_001080978	chr19,chr19,chr19	+,-,-	RPS9,LILRB2,LILRB2	-82506,-2148,-2148
chr22:24386292-24387196	chr22	+	24386310	24386782	True	NM_001144931,NM_000853	chr22,chr22	+,-	LOC391322,GSTT1	-13244,-2026
chr1:213189217-213189440	chr1	+	213189222	213189316	True	NM_144567,NM_001136138	chr1,chr1	-,+	ANGEL2,RPS6KC1	-54,35271
chr3:32279724-32279946	chr3	+	32279724	32279844	True	NM_017784,NM_178868	chr3,chr3	-,+	OSBPL10,CMTM8	-256382,326
chr17:10265539-10266555	chr17	+	10265695	10266374	True	NM_003802,NM_020233	chr17,chr17	-,+	MYH13,C17orf48	10007,334552
chr16:46919047-46919399	chr16	+	46919046	46919424	True	NM_133443,NM_001142466,NM_001001436	chr16,chr16,chr16	+,+,-	GPT2,GPT2,C16orf87	-789,5,-53972
chr6:133136345-133137266	chr6	+	133136498	133137315	True	NM_052831,NR_002436,NR_002435,NR_002434,NM_001016	chr6,chr6,chr6,chr6,chr6	-,+,+,+,+	C6orf192,SNORA33,SNORD100,SNORD101,RPS12	-16751,1042,625,-111,-849
chr11:74870204-74870757	chr11	+	74870217	74870779	True	NM_001005285,NM_001145212,NM_007256,NM_001145211	chr11,chr11,chr11,chr11	-,+,+,+	OR2AT4,SLCO2B1,SLCO2B1,SLCO2B1	-69459,-8236,-8236,64
chr10:103602131-103603125	chr10	+	103602414	103602887	True	NM_024747,NM_173195,NM_173191,NM_173192,NM_173193,NM_173194,NM_014591,NM_173197	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,-,-,-,-,-,-,-	HPS6,KCNIP2,KCNIP2,KCNIP2,KCNIP2,KCNIP2,KCNIP2,KCNIP2	222236,841,841,841,841,-2803,841,841
chr21:40176691-40177140	chr21	+	40176758	40177040	True	NR_027065,NM_005239	chr21,chr21	-,+	NCRNA00114,ETS2	-31357,808
chr6:90531420-90531744	chr6	+	90531524	90531770	True	NM_001137667,NM_001137668,NM_014611,NM_012115	chr6,chr6,chr6,chr6	+,+,-,+	CASP8AP2,CASP8AP2,MDN1,CASP8AP2	7848,7848,-2082,7848
chr8:76448843-76450532	chr8	+	76449235	76450568	True	NM_004133,NR_024360	chr8,chr8	+,-	HNF4G,LOC100192378	1634,1144992
chr10:27534899-27535635	chr10	+	27534945	27535517	True	NR_003525,NM_032844,NM_145698,NR_024150,NM_001042473	chr10,chr10,chr10,chr10,chr10	-,+,-,-,-	LOC387646,MASTL,ACBD5,ACBD5,ACBD5	5768,-91244,-5137,-3877,-3877
chr11:19736490-19736859	chr11	+	19736544	19736838	True	NM_182964,NR_015384,NM_145117	chr11,chr11,chr11	+,-,+	NAV2,LOC100126784,NAV2	-1714,-398,-1714
chr8:15096023-15097020	chr8	+	15096050	15096906	True	NM_139167,NM_006765	chr8,chr8	-,+	SGCZ,TUSC3	-258,300689
chr5:131410625-131411547	chr5	+	131410729	131411492	True	NM_001205250,NM_000758	chr5,chr5	-,+	ACSL6,CSF2	-62968,-1295
chr1:6050257-6051087	chr1	+	6050338	6051014	True	NM_001199861,NM_015102	chr1,chr1	+,-	KCNAB2,NPHP4	1343,1569
chr10:120631483-120631731	chr10	+	120631697	120631779	True	NM_199461,NM_153810	chr10,chr10	+,-	NANOS1,C10orf46	157448,-116939
chr15:67809130-67810702	chr15	+	67809194	67810572	True	NM_001143936,NM_024666	chr15,chr15	+,-	C15orf61,AAGAB	2949,-262120
chr16:72038131-72038514	chr16	+	72038255	72038521	True	NM_001361,NM_181536	chr16,chr16	+,-	DHODH,PKD1L3	4121,-4378
chr16:1033846-1034072	chr16	+	1033886	1033968	True	NR_033645,NM_014587,NR_036442	chr16,chr16,chr16	-,+,-	LMF1,SOX8,LMF1	-2568,-2129,-2568
chr11:118306369-118306728	chr11	+	118306397	118306771	True	NM_001197104,NM_005933,NM_001040651	chr11,chr11,chr11	+,+,-	MLL,MLL,CD3D	433,433,-92938
chr1:100202161-100203429	chr1	+	100202404	100203243	True	NR_037516,NR_030382	chr1,chr1	+,-	MIR548AA1,MIR548D1	-47844,-23891
chr1:220221332-220222063	chr1	+	220221339	220222065	True	NM_004446,NM_018060	chr1,chr1	-,+	EPRS,IARS2	-1339,45389
chr21:47742122-47742889	chr21	+	47742227	47742907	True	NM_006031,NM_058180	chr21,chr21	+,-	PCNT,C21orf58	1128,928
chr17:26680470-26681539	chr17	+	26680716	26681500	True	NM_015584,NM_152464	chr17,chr17	-,+	POLDIP2,TMEM199	3153,3186
chr11:124736385-124736624	chr11	+	124736562	124736638	True	NM_022370,NM_019055	chr11,chr11	+,-	ROBO3,ROBO4	-1308,31243
chr7:131430843-131431315	chr7	+	131430867	131431294	True	NM_005397,NM_013255	chr7,chr7	-,+	PODXL,MKLN1	-189491,-418323
chr17:39968895-39969115	chr17	+	39968926	39969080	True	NM_006455,NM_021939	chr17,chr17	-,+	LEPREL4,FKBP10	-475,-15
chr1:224801965-224803658	chr1	+	224801981	224803549	True	NM_152495,NM_025160	chr1,chr1	+,-	CNIH3,WDR26	629,-179980
chr15:78911186-78911717	chr15	+	78911190	78911716	True	NM_001166694,NM_000743,NM_000745	chr15,chr15,chr15	-,-,+	CHRNA3,CHRNA3,CHRNA5	1971,1971,-53379
chr10:1206309-1206590	chr10	+	1206321	1206605	True	NR_015376,NM_004508	chr10,chr10	+,-	NCRNA00200,IDI1	-665,-111260
chr3:143690627-143690913	chr3	+	143690651	143690817	True	NM_173653,NM_173552,NM_001134470	chr3,chr3,chr3	-,+,+	SLC9A9,C3orf58,C3orf58	-123278,-62,1349
chr1:50870465-50872288	chr1	+	50871017	50872327	True	NM_021952,NM_032110	chr1,chr1	+,-	ELAVL4,DMRTA2	-296482,16870
chr18:29078404-29078980	chr18	+	29078454	29079027	True	NM_004775,NM_001943	chr18,chr18	-,+	B4GALT6,DSG2	185709,-478
chr6:26084702-26085813	chr6	+	26084879	26085459	True	NM_139008,NM_139009,NM_005323,NM_000410,NM_139003,NM_139004,NM_139006,NM_139007,NM_139011,NM_139010	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	+,+,-,+,+,+,+,+,+,+	HFE,HFE,HIST1H1T,HFE,HFE,HFE,HFE,HFE,HFE,HFE	2049,2049,22955,2049,2049,2049,2049,2049,2049,2049
chr17:57295483-57296534	chr17	+	57295718	57296321	True	NM_182569,NM_182620,NM_001165994,NM_001165993,NM_018149	chr17,chr17,chr17,chr17,chr17	+,-,+,+,+	GDPD1,SKA2,GDPD1,GDPD1,C17orf71	1506,-62918,1506,1506,-8406
chr1:16302947-16303609	chr1	+	16302949	16303465	True	NM_003443,NM_178840	chr1,chr1	-,+	ZBTB17,C1orf64	-322,27265
chr14:38065760-38066484	chr14	+	38065764	38066476	True	NM_138731,NM_004496	chr14,chr14	+,-	MIPOL1,FOXA1	-398698,-1275
chr14:39640795-39641582	chr14	+	39641053	39641481	True	NM_001079537,NM_177452,NM_002687	chr14,chr14,chr14	-,-,+	TRAPPC6B,TRAPPC6B,PNN	-1419,-1419,2905
chr4:471320-472649	chr4	+	471319	472038	True	NR_002451,NM_001127178	chr4,chr4	-,+	ABCA11P,PIGG	-3321,20950
chr4:189061433-189062388	chr4	+	189061574	189062229	True	NM_173553,NM_178556	chr4,chr4	-,+	TRIML2,TRIML1	-35166,-1027
chr9:34958935-34959916	chr9	+	34959190	34959957	True	NM_007126,NM_015297	chr9,chr9	-,+	VCP,KIAA1045	112832,-1049
chr7:66767244-66767601	chr7	+	66767296	66767591	True	NM_022906,NR_022007	chr7,chr7	+,-	STAG3L4,PMS2P4	24,48
chrX:2883864-2885752	chrX	+	2884022	2885749	True	NM_000047,NM_001011719	chrX,chrX	-,+	ARSE,ARSH	-1528,38904
chr2:207306164-207306697	chr2	+	207306406	207306690	True	NM_005279,NM_003812	chr2,chr2	-,+	GPR1,ADAM23	-223635,1677
chr13:25859976-25860842	chr13	+	25860017	25860858	True	NM_001008564,NM_004685	chr13,chr13	+,-	NUPL1,MTMR6	14807,896
chr2:172864012-172864681	chr2	+	172864099	172864607	True	NM_199227,NM_004405	chr2,chr2	+,-	METAP1D,DLX2	196,102921
chr1:29214665-29214865	chr1	+	29214750	29214914	True	NM_004437,NM_203343,NM_203342,NM_001171868,NM_001166005,NM_001166007	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,-,+,+	EPB41,EPB41,EPB41,TMEM200B,EPB41,EPB41	-1198,-1198,-1198,234149,-1198,-1198
chr19:10123784-10124040	chr19	+	10123908	10124036	True	NM_015719,NM_015725	chr19,chr19	-,+	COL5A3,RDH8	-2761,-43
chr8:142377359-142378080	chr8	+	142377599	142378087	True	NR_024441,NM_005293	chr8,chr8	+,-	LOC731779,GPR20	-27002,-234
chr8:144796866-144797809	chr8	+	144796955	144797744	True	NM_001162914,NM_139021	chr8,chr8	-,+	LOC100130274,MAPK15	-6676,762
chr3:57523703-57525499	chr3	+	57523871	57525155	True	NM_198564,NM_178504,NM_177966	chr3,chr3,chr3	-,-,+	DNAH12,DNAH12,PDE12	4974,4974,16825
chr17:636555-637068	chr17	+	636581	637037	True	NM_018289,NM_024792,NM_015721	chr17,chr17,chr17	-,+,-	VPS53,FAM57A,GEMIN4	-18485,-785,18514
chr12:69078961-69079442	chr12	+	69079118	69079184	True	NM_020401,NR_033335	chr12,chr12	+,-	NUP107,SNORA70G	1546,-57963
chr10:75015234-75016515	chr10	+	75015647	75016309	True	NM_173348,NM_015190,NM_016065	chr10,chr10,chr10	+,-,-	FAM149B1,DNAJC9,MRPS16	-87831,-8622,-3196
chr2:71353621-71354878	chr2	+	71353740	71354532	True	NM_005791,NM_032601	chr2,chr2	+,-	MPHOSPH10,MCEE	2911,2924
chr19:46855257-46855931	chr19	+	46855260	46855610	True	NM_006247,NM_001204284,NM_032040	chr19,chr19,chr19	+,+,-	PPP5C,PPP5C,CCDC8	-5060,-5060,61359
chr11:82868094-82868371	chr11	+	82868159	82868325	True	NM_015885,NM_014488	chr11,chr11	+,-	PCF11,RAB30	-73,-85275
chr6:24493626-24494804	chr6	+	24493931	24494735	True	NM_170740,NM_001503,NM_001080,NM_177483	chr6,chr6,chr6,chr6	+,-,+,-	ALDH5A1,GPLD1,ALDH5A1,GPLD1	461,-4081,461,-4132
chr17:62973391-62975217	chr17	+	62973650	62975222	True	NR_026903,NM_001165933	chr17,chr17	-,+	AMZ2P1,RGS9	-1947,158233
chr17:62973391-62975217	chr17	-	66241884	66241934	False	NM_001033571,NM_001033570,NM_001033572,NM_001033574,NM_001174166,NM_016627,NM_001033569	chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,-,+,+	AMZ2,AMZ2,AMZ2,AMZ2,SLC16A6,AMZ2,AMZ2	2210,2210,2210,2210,45521,2210,2210
chrX:69350178-69350927	chrX	+	69350180	69350745	True	NM_001002254,NM_001551	chrX,chrX	-,+	AWAT2,IGBP1	-80392,2572
chr11:14378492-14379591	chr11	+	14378618	14379608	True	NM_000922,NM_001102669,NM_012250,NM_001177314,NM_001177315	chr11,chr11,chr11,chr11,chr11	+,-,-,-,-	PDE3B,RRAS2,RRAS2,RRAS2,RRAS2	285660,515,1172,6494,473
chr12:54693658-54694626	chr12	+	54693660	54694498	True	NM_001136023,NM_006163,NR_002944	chr12,chr12,chr12	-,-,+	NFE2,NFE2,HNRNPA1P10	345,-4116,-19179
chr20:52493003-52493646	chr20	+	52493087	52493639	True	NR_002189,NM_002623	chr20,chr20	-,+	SUMO1P1,PFDN4	-839,330862
chr1:224542909-224543863	chr1	+	224543091	224543891	True	NM_014184,NM_206840	chr1,chr1	+,-	CNIH4,NVL	703,-25219
chr14:105716234-105716793	chr1	-	24228498	24228556	True	NM_001841,NM_017761	chr1,chr1	-,+	CNR2,PNRC2	11319,57744
chr5:43346913-43347589	chr5	+	43347226	43347638	True	NM_153361,NM_002130	chr5,chr5	+,-	MGC42105,HMGCS1	-154961,-33631
chr19:51228391-51228604	chr19	+	51228466	51228642	True	NM_016148,NM_002975	chr19,chr19	-,+	SHANK1,CLEC11A	-8271,-1912
chr1:211431785-211432025	chr1	+	211431808	211431889	True	NM_001136225,NM_001136224,NM_172362,NM_001136223,NM_018254	chr1,chr1,chr1,chr1,chr1	+,+,-,+,+	RCOR3,RCOR3,KCNH1,RCOR3,RCOR3	818,818,-124351,818,1399
chr2:122519727-122520877	chr2	+	122520014	122520683	True	NM_032390,NM_004622	chr2,chr2	-,+	MKI67IP,TSN	-25511,-6944
chr7:155451386-155452491	chr7	+	155451482	155452520	True	NM_001103176,NM_053043	chr7,chr7	-,+	CNPY1,RBM33	-124943,-14330
chr1:53694076-53695029	chr1	+	53694203	53694853	True	NM_000098,NM_017887,NM_002370	chr1,chr1,chr1	+,-,-	CPT2,C1orf123,MAGOH	-32154,-7914,9485
chr6:75950911-75951425	chr6	+	75950927	75951302	True	NR_029466,NM_001100409,NM_001865	chr6,chr6,chr6	-,+,-	COX7A2,SENP6,COX7A2	2407,360319,2407
chr19:29434726-29436278	chr19	+	29434778	29436151	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	19886,268035
chr11:4744212-4744467	chr11	+	4744240	4744516	True	NM_030774,NM_152430	chr11,chr11	-,+	OR51E2,OR51E1	-25164,-79135
chr11:123948651-123949748	chr11	+	123948769	123949719	True	NM_198315,NM_001004463	chr11,chr11	+,-	VWA5A,OR10G7	36391,-39061
chr6:131890674-131891869	chr6	+	131891024	131891918	True	NM_015979,NM_000045	chr6,chr6	-,+	MED23,ARG1	57495,2446
chr7:48015995-48016343	chr7	+	48016000	48016390	True	NM_001100159,NM_004507,NR_037917	chr7,chr7,chr7	+,-,-	C7orf57,HUS1,HUS1	58726,2883,2883
chr2:120282270-120283198	chr2	+	120282312	120283224	True	NM_001029996,NM_002980	chr2,chr2	+,-	PCDP1,SCTR	18800,-284
chr14:103783715-103784693	chr14	+	103783756	103784528	True	NR_033938,NM_001969	chr14,chr14	-,+	LOC100131366,EIF5	-128391,15964
chr11:64492168-64492644	chr11	+	64492221	64492663	True	NM_153378,NM_138732,NM_015080	chr11,chr11,chr11	+,-,-	SLC22A12,NRXN2,NRXN2	-133990,-1561,-1561
chr11:124546503-124547995	chr11	+	124546985	124548031	True	NM_017425,NM_170601,NM_001199922	chr11,chr11,chr11	+,-,-	SPA17,SIAE,SIAE	-3306,-3208,-786
chr19:47921693-47922253	chr19	+	47921836	47921964	True	NM_001009813,NM_014681,NM_020160	chr19,chr19,chr19	-,+,-	MEIS3,DHX34,MEIS3	871,-69349,871
chr6:45348954-45350891	chr6	+	45349076	45350619	True	NM_004348,NM_181356,NM_003599	chr6,chr6,chr6	+,-,-	RUNX2,SUPT3H,SUPT3H	39294,-3406,-3501
chr22:38852976-38853923	chr22	+	38852986	38853856	True	NM_016657,NM_152868	chr22,chr22	+,-	KDELR3,KCNJ4	10226,-1783
chrX:43509636-43510647	chrX	+	43509975	43510680	True	NM_000898,NM_000240	chrX,chrX	-,+	MAOB,MAOA	231091,4728
chr17:9549581-9550254	chr17	+	9549670	9550274	True	NM_153210,NR_033656	chr17,chr17	+,-	USP43,STX8	-771,-70395
chr3:42622141-42623124	chr3	+	42622154	42623019	True	NM_032970,NM_004206,NM_016305,NM_001201584	chr3,chr3,chr3,chr3	-,-,+,-	SEC22C,SEC22C,SS18L2,SEC22C	560,560,9278,560
chr6:11095878-11097023	chr6	+	11096137	11096853	True	NM_001135575,NM_207582	chr6,chr6	+,-	LOC221710,ERVFRDE1	-1922,15270
chr3:39448443-39449148	chr3	+	39448532	39448981	True	NM_001171174,NR_002325,NM_001012321,NM_002295,NR_002324	chr3,chr3,chr3,chr3,chr3	-,+,+,+,+	CX3CR1,SNORA6,RPSA,RPSA,SNORA62	-125306,900,129,-379,3563
chr1:149910778-149911094	chr1	+	149910873	149911077	True	NM_181873,NM_016074,NM_001145862	chr1,chr1,chr1	-,+,-	MTMR11,BOLA1,MTMR11	-2607,-39771,-2082
chr5:10565661-10566032	chr5	+	10565688	10566026	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-1311,195411
chr8:42949473-42950218	chr8	+	42949585	42950137	True	NR_027669,NM_032237	chr8,chr8	-,+	RNF170,SGK196	-197719,-990
chr9:138855216-138855663	chr9	+	138855435	138855605	True	NM_016172,NM_020822	chr9,chr9	-,+	UBAC1,KCNT1	-2209,-261455
chr19:1284330-1284663	chr19	+	1284428	1284562	True	NR_027271,NM_001405,NM_017914	chr19,chr19,chr19	-,+,+	C19orf23,EFNA2,C19orf24	-14169,1605,-8959
chr15:56656510-56657566	chr15	+	56656912	56657460	True	NM_018365,NM_198524	chr15,chr15	-,+	MNS1,TEX9	99929,183
chr11:64060561-64061011	chr11	+	64060614	64061050	True	NM_001039496,NM_020155,NM_001177358,NM_001170880,NM_004322,NM_001170881,NM_001170726,NM_033310,NM_032989	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,-,+,+,+,-	C11orf20,GPR137,GPR137,GPR137,BAD,GPR137,GPR137,KCNK4,BAD	6812,-7083,-8382,-7083,-8438,-8380,-8854,-1872,-8438
chr12:57148497-57149970	chr12	+	57149113	57149808	True	NM_000946,NM_003725	chr12,chr12	-,+	PRIM1,HSD17B6	-2967,7299
chr1:57344724-57345946	chr1	+	57345161	57345959	True	NM_000562,NM_001004303	chr1,chr1	+,-	C8A,C1orf168	-24782,-59792
chr9:136387537-136389159	chr9	+	136387779	136389197	True	NM_001080483,NM_001145320	chr9,chr9	-,+	TMEM8C,ADAMTSL2	921,8088
chr12:15505530-15505899	chr12	+	15505616	15505935	True	NM_032918,NM_030667	chr12,chr12	-,+	RERG,PTPRO	-131205,-30186
chr13:52721826-52723117	chr13	+	52722367	52723039	True	NM_152720,NM_021645	chr13,chr13	-,+	NEK3,UTP14C	10681,-123602
chr2:84688527-84689051	chr2	+	84688567	84689100	True	NM_003849,NM_001370	chr2,chr2	-,+	SUCLG1,DNAH6	-1981,54478
chr17:16255780-16256053	chr17	+	16255818	16256086	True	NM_181716,NM_018955	chr17,chr17	-,+	CENPV,UBB	776,28280
chr22:22875466-22875991	chr22	+	22875681	22875931	True	NM_080740,NR_027426	chr22,chr22	-,+	ZNF280A,LOC648691	-1068,25824
chr7:1125593-1126589	chr7	+	1125601	1126553	True	NM_001098201,NM_001134395,NM_001505,NM_001039966	chr7,chr7,chr7,chr7	+,-,+,+	GPER,C7orf50,GPER,GPER	1169,51390,-43,-43
chrX:153191945-153192327	chrX	+	153191967	153192291	True	NM_001164741,NM_003491,NM_001666,NM_001146151	chrX,chrX,chrX,chrX	-,-,-,+	ARHGAP4,NAA10,ARHGAP4,AVPR2	-253,8227,-253,-21489
chr16:73126744-73127123	chr16	+	73126744	73127161	True	NM_001164766,NR_027756	chr16,chr16	-,+	ZFHX3,HTA	-34210,-547
chr16:86542438-86542941	chr16	+	86542604	86542971	True	NM_001451,NR_036444,NR_033925	chr16,chr16,chr16	+,-,-	FOXF1,LOC400550,LOC400550	1161,-138,-138
chrX:106019335-106020284	chrX	+	106019397	106020264	True	NM_198881,NM_001171706	chrX,chrX	+,-	TBC1D8B,RIPPLY1	25654,126358
chr15:62350408-62351970	chr15	+	62350591	62351986	True	NM_017684,NM_001018088,NM_018080,NM_020821,NM_207322	chr15,chr15,chr15,chr15,chr15	-,-,-,-,+	VPS13C,VPS13C,VPS13C,VPS13C,C2CD4A	728,728,728,728,7189
chr14:102429508-102430384	chr14	+	102429588	102430440	True	NM_001376,NM_005348	chr14,chr14	+,-	DYNC1H1,HSP90AA1	424,123130
chr11:33279738-33279941	chr11	+	33279762	33279884	True	NM_001033506,NM_001048200,NM_005734	chr11,chr11,chr11	-,+,+	CSTF3,HIPK3,HIPK3	-96725,-645,-645
chr17:47436921-47438776	chr17	+	47436957	47438656	True	NM_014897,NR_034161,NM_001145365	chr17,chr17,chr17	-,+,-	ZNF652,FLJ40194,ZNF652	1230,-111410,871
chr5:64853853-64855176	chr5	+	64854009	64854810	True	NM_015342,NM_022145	chr5,chr5	+,-	PPWD1,CENPK	4320,4244
chr12:94541025-94541591	chr12	+	94541199	94541601	True	NM_001042399,NM_005761	chr12,chr12	-,+	CCDC41,PLXNC1	312213,897
chr1:211303762-211304564	chr1	+	211303908	211304583	True	NM_001136225,NM_002238,NM_172362	chr1,chr1,chr1	+,-,-	RCOR3,KCNH1,KCNH1	128124,2937,2937
chr12:122907800-122908802	chr12	+	122907820	122908508	True	NM_002956,NM_198240,NM_014708	chr12,chr12,chr12	-,-,+	CLIP1,CLIP1,KNTC1	-704,-704,103300
chr17:7819152-7819403	chr17	+	7819166	7819242	True	NR_003000,NR_024349	chr17,chr17	+,-	SCARNA21,LOC284023	-9776,73
chr3:121264617-121264842	chr3	+	121264640	121264844	True	NM_199420,NM_001012659	chr3,chr3	-,+	POLQ,ARGFX	59,21933
chrX:38421702-38422275	chrX	+	38421917	38422305	True	NM_001034853,NM_004615	chrX,chrX	-,+	RPGR,TSPAN7	-235129,-1238
chr3:97165127-97166986	chr3	+	97165447	97167019	True	NM_001042533,NM_173655	chr3,chr3	-,+	MINA,EPHA6	524255,-7021
chr2:23677105-23677427	chr2	+	23677111	23677400	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	472593,-68864
chr6:109862906-109864481	chr6	+	109862988	109864499	True	NM_001164313,NM_003080	chr6,chr6	-,+	ZBTB24,SMPD2	-58548,-101114
chr13:33588077-33589569	chr13	+	33588348	33589562	True	NM_004795,NM_178007	chr13,chr13	+,-	KL,STARD13	1008,170704
chr3:33156663-33158150	chr3	+	33156818	33158206	True	NM_001135602,NM_006371	chr3,chr3	-,+	GLB1,CRTAP	-18124,-1419
chr3:27675244-27675706	chr3	+	27675461	27675641	True	NM_005442,NM_182523	chr3,chr3	-,+	EOMES,CMC1	88194,607482
chr3:197279996-197281201	chr3	+	197280465	197281163	True	NM_203314,NM_004051,NM_001011537	chr3,chr3,chr3	-,-,+	BDH1,BDH1,FYTTD1	1745,1745,195260
chr6:52548180-52548501	chr6	+	52548336	52548407	True	NM_014051,NR_033760	chr6,chr6	+,-	TMEM14A,GSTA7P	-12510,61605
chr2:98587399-98588525	chr2	+	98587546	98588403	True	NM_015348,NM_144992	chr2,chr2	-,+	TMEM131,VWA3B	24009,115191
chr15:79236593-79236837	chr15	+	79236600	79236816	True	NM_004390,NM_206839	chr15,chr15	-,+	CTSH,MORF4L1	654,-71479
chr6:152019154-152020034	chr6	+	152019518	152020082	True	NM_017909,NM_001122742	chr6,chr6	-,+	RMND1,ESR1	-246202,-7945
chr1:53393898-53394172	chr1	+	53393897	53394174	True	NM_002979,NM_001198962,NM_001193599,NM_001193600,NM_001193617,NM_018281,NM_001198961,NM_001007098	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,-,+,+,+,-,-,+	SCP2,ECHDC2,SCP2,SCP2,SCP2,ECHDC2,ECHDC2,SCP2	-1047,-6451,-1047,-1047,-1047,-6451,-6451,-1047
chr5:149384151-149385016	chr5	+	149384175	149384805	True	NM_014983,NM_030953	chr5,chr5	+,-	HMGXB3,TIGD6	-4057,-3958
chr4:156586708-156588097	chr4	+	156586904	156588021	True	NM_000856,NM_001130685,NM_001130684,NM_001130687,NM_001130686,NM_001130683,NM_001130682,NM_017419	chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4	+,+,+,+,+,+,+,-	GUCY1A3,GUCY1A3,GUCY1A3,GUCY1A3,GUCY1A3,GUCY1A3,GUCY1A3,ACCN5	-160,127,793,-160,-160,127,-160,199454
chr17:38138123-38139444	chr17	+	38138135	38139010	True	NM_139280,NM_002809	chr17,chr17	-,+	ORMDL3,PSMD3	-54251,-1126
chr6:160183646-160184039	chr6	+	160183701	160184079	True	NR_037166,NM_005891	chr6,chr6	-,+	LOC100129518,ACAT2	-337,-763
chr5:141487859-141488222	chr5	+	141487893	141488189	True	NM_005471,NM_030571	chr5,chr5	-,+	GNPDA1,NDFIP1	-95273,134
chr8:117758132-117759460	chr8	+	117758204	117759282	True	NM_003756,NM_032334	chr8,chr8	-,+	EIF3H,UTP23	8831,19459
chr14:24674797-24675926	chr14	+	24674819	24675792	True	NM_001014842,NM_174944,NM_006405,NM_001199821,NM_001199822,NM_014169,NM_001184739,NM_138476	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	-,+,-,-,-,-,+,-	TM9SF1,TSSK4,TM9SF1,MDP1,MDP1,CHMP4A,TSSK4,MDP1	-9937,28,-9937,9535,9535,7295,28,9535
chr8:107289563-107289810	chr8	+	107289562	107289836	True	NM_018002,NM_139166,NM_001198533	chr8,chr8,chr8	+,-,+	OXR1,ABRA,OXR1	-7217,492686,-7217
chr22:41073322-41073606	chr22	+	41073340	41073472	True	NM_020831,NM_005297	chr22,chr22	-,+	MKL1,MCHR1	-40650,1709
chr1:120439170-120440293	chr1	+	120439380	120440324	True	NM_021794,NM_006623	chr1,chr1	-,+	ADAM30,PHGDH	-233,-185013
chr20:35171279-35171522	chr20	+	35171323	35171493	True	NM_181526,NM_032214,NM_006097	chr20,chr20,chr20	+,-,+	MYL9,SLA2,MYL9	-1477,103115,-1477
chr8:56012938-56013664	chr8	+	56012944	56013618	True	NM_052898,NR_027765	chr8,chr8	+,-	XKR4,SBF1P1	1398,354313
chr10:6186063-6186579	chr10	+	6186411	6186563	True	NM_001145443,NR_036111,NM_000417	chr10,chr10,chr10	+,+,-	PFKFB3,MIR3155,IL2RA	279,7595,-82078
chr10:60145455-60145694	chr10	+	60145496	60145716	True	NM_152230,NM_003201	chr10,chr10	-,+	IPMK,TFAM	-117802,-371
chr19:2048435-2049395	chr19	+	2048441	2049431	True	NM_001031735,NM_017572,NM_199054	chr19,chr19,chr19	+,-,-	IZUMO4,MKNK2,MKNK2	47436,1862,1862
chr2:219579372-219580646	chr2	+	219579382	219580311	True	NM_022453,NM_014640	chr2,chr2	-,+	RNF25,TTLL4	-42601,-3874
chr15:31119521-31120513	chr15	+	31119660	31120412	True	NM_017762,NM_001146095	chr15,chr15	-,+	MTMR10,FAN1	163445,75642
chr11:32815315-32816194	chr11	+	32815603	32816243	True	NM_001008391,NM_024081	chr11,chr11	-,+	CCDC73,PRRG4	-6,35245
chr17:7653237-7653703	chr17	+	7653493	7653701	True	NR_002778,NM_001126114	chr17,chr17	+,-	RPL29P2,TP53	3936,-62630
chr6:46293837-46295217	chr6	+	46293853	46295249	True	NM_005822,NM_014936	chr6,chr6	-,+	RCAN2,ENPP4	-322,-196203
chr17:4711450-4711721	chr17	+	4711568	4711678	True	NM_002663,NM_182566	chr17,chr17	+,-	PLD2,VMO1	-1198,-21839
chr16:87985990-87986534	chr16	+	87986000	87986324	True	NM_001173542,NM_001173541,NM_001173539,NM_017869,NM_079837,NM_001173540,NM_001739	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,+,-	BANP,BANP,BANP,BANP,BANP,BANP,CA5A	7152,-1013,-1013,-1013,-1013,-1013,-15888
chr20:43285361-43285922	chr20	+	43285408	43285788	True	NM_003881,NM_000022	chr20,chr20	+,-	WISP2,ADA	58096,-5032
chr6:26044346-26045672	chr6	+	26044384	26045683	True	NM_021062,NM_003531	chr6,chr6	-,+	HIST1H2BB,HIST1H3C	-499,-45
chr17:75372808-75373079	chr17	+	75372812	75373078	True	NM_001113494,NM_001113493,NR_036200	chr17,chr17,chr17	+,+,-	SEPT9,SEPT9,MIR4316	-698,-3591,20108
chr19:47837130-47838883	chr19	+	47837295	47838705	True	NM_001009813,NM_018485	chr19,chr19	-,+	MEIS3,GPR77	84136,1665
chr10:18242331-18243341	chr10	+	18242428	18243136	True	NM_001145195,NM_014241,NM_152725	chr10,chr10,chr10	+,-,+	SLC39A12,PTPLA,SLC39A12	-1711,-583055,-1711
chr9:98187385-98187809	chr9	+	98187580	98187660	True	NR_029496,NM_001083607	chr9,chr9	+,-	MIR24-1,PTCH1	-339340,81877
chr16:31580918-31581361	chr16	+	31580962	31581346	True	NR_027011,NM_016633	chr16,chr16	-,+	CSDAP1,AHSP	-117,-41810
chr19:12661749-12662078	chr19	+	12661791	12661875	True	NM_153358,NM_144976	chr19,chr19	+,-	ZNF791,ZNF564	59856,531
chr5:179106328-179106750	chr5	+	179106329	179106613	True	NM_001024649,NM_001164444	chr5,chr5	+,-	CANX,CBY3	19316,1412
chr20:60794297-60794558	chr20	+	60794440	60794560	True	NM_007232,NM_014835	chr20,chr20	-,+	HRH3,OSBPL2	813,19019
chr5:761723-762307	chr5	+	761728	762302	True	NM_001166260,NM_007030	chr5,chr5	+,-	TRIP13,TPPP	130666,-68218
chr7:112429423-112430105	chr7	+	112429547	112429949	True	NM_182597,NM_022484	chr7,chr7	+,-	C7orf53,TMEM168	-308539,579
chr6:33289997-33290448	chr6_qbl_hap6	+	4522335	4522721	False	NM_001145338,NM_001350,NM_172208,NM_001185181,NM_005453,NM_172209,NM_001141970,NM_003190,NM_001141969	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,TAPBP,PFDN6,ZBTB22,TAPBP,DAXX,TAPBP,DAXX	-4369,371,-7925,-32731,-4576,-7925,371,-7925,371
chr6:33289997-33290448	chr6_mcf_hap5	+	4763828	4764214	False	NM_001145338,NM_001350,NM_172208,NM_001185181,NM_005453,NM_172209,NM_001141970,NM_003190,NM_001141969	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,TAPBP,PFDN6,ZBTB22,TAPBP,DAXX,TAPBP,DAXX	-4366,371,-7922,-32723,-4573,-7922,371,-7922,371
chr6:33289997-33290448	chr6_cox_hap2	+	4733904	4734290	False	NM_001145338,NM_001350,NM_172208,NM_001185181,NM_005453,NM_172209,NM_001141970,NM_003190,NM_001141969	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,TAPBP,PFDN6,ZBTB22,TAPBP,DAXX,TAPBP,DAXX	-4370,371,-7928,-32729,-4577,-7928,371,-7928,371
chr6:33289997-33290448	chr6	+	33290086	33290472	True	NR_024517,NM_001350,NM_001145338,NM_172208,NM_001185181,NM_005453,NM_172209,NM_001141970,NM_003190,NM_001141969	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,-,+,-,-,-,-,-	DAXX,DAXX,ZBTB22,TAPBP,PFDN6,ZBTB22,TAPBP,DAXX,TAPBP,DAXX	371,371,-4367,-7922,-32725,-4574,-7922,371,-7922,371
chr6:33289997-33290448	chr6_dbb_hap3	+	4571413	4571799	False	NM_001145338,NM_001350,NM_172208,NM_001185181,NM_005453,NM_172209,NM_001141970,NM_003190,NM_001141969	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,TAPBP,PFDN6,ZBTB22,TAPBP,DAXX,TAPBP,DAXX	-4370,371,-7926,-32726,-4577,-7926,371,-7926,371
chr19:6722221-6723139	chr19	+	6722436	6722818	True	NM_004240,NM_000064	chr19,chr19	+,-	TRIP10,C3	16888,-1774
chr10:105211045-105211801	chr10	+	105211048	105211774	True	NR_024552,NM_015916,NM_004210,NM_001001412	chr10,chr10,chr10,chr10	-,-,+,-	CALHM2,CALHM2,NEURL,CALHM1	438,438,41960,6924
chr3:123810065-123810474	chr3	+	123810105	123810489	True	NR_028136,NM_003947,NM_001024660,NM_017578	chr3,chr3,chr3,chr3	+,+,+,-	KALRN,KALRN,KALRN,ROPN1	3068,3068,3068,-99906
chr9:130638332-130639609	chr9	+	130638356	130639509	True	NM_000476,NM_001018078	chr9,chr9	-,+	AK1,FPGS	563,-72899
chr1:175152669-175153122	chr1	+	175152725	175153149	True	NM_001162893,NM_022093,NM_014656,NM_001162895,NM_001162894	chr1,chr1,chr1,chr1,chr1	-,+,-,-,-	KIAA0040,TNN,KIAA0040,KIAA0040,KIAA0040	9130,-115782,8850,8850,9130
chr9:77486132-77487018	chr9	+	77486194	77486639	True	NM_012383,NM_001177311	chr9,chr9	+,-	OSTF1,TRPM6	216758,15681
chr1:31384760-31385629	chr1	+	31384816	31385492	True	NR_002762,NM_014654	chr1,chr1	+,-	PRO0611,SDC3	75419,-3336
chr2:38372998-38374533	chr2	+	38373084	38374458	True	NR_027252,NM_000104	chr2,chr2	+,-	C2orf58,CYP1B1	-14902,-69761
chr17:32909515-32909776	chr17	+	32909537	32909707	True	NM_207454,NM_207313	chr17,chr17	-,+	C17orf102,TMEM132E	-3149,-1820
chr5:110615687-110617476	chr5	+	110615694	110617325	True	NM_001744,NM_139164	chr5,chr5	+,-	CAMK4,STARD4	-55800,230895
chr19:57740994-57741579	chr19	+	57741177	57741346	True	NM_001012729,NM_001015878,NM_001015879,NM_003160	chr19,chr19,chr19,chr19	-,+,+,+	DUXA,AURKC,AURKC,AURKC	-62321,1081,1030,1030
chr12:109124245-109124508	chr12	+	109124267	109124433	True	NM_001917,NM_014325	chr12,chr12	+,-	DAO,CORO1C	149423,912
chr2:98278975-98279502	chr2	+	98279078	98279494	True	NM_001862,NM_005735	chr2,chr2	+,-	COX5B,ACTR1B	-16608,1117
chr19:35840192-35840924	chr19	+	35840351	35840687	True	NM_005303,NM_152481,NM_005304	chr19,chr19,chr19	+,-,+	FFAR1,FAM187B,FFAR3	1757,-120723,8800
chr8:143784817-143785936	chr8	+	143784821	143785850	True	NM_017527,NM_003724,NM_001160354,NM_001160355	chr8,chr8,chr8,chr8	+,-,+,+	LY6K,JRK,LY6K,LY6K	-3343,-33420,-3343,-3343
chr1:225648147-225649444	chr1	+	225648215	225649468	True	NM_194442,NM_001130440	chr1,chr1	-,+	LBR,SRP9	-31658,316046
chrX:73837350-73837873	chrX	+	73837447	73837610	True	NM_183353,NM_016120,NM_006517	chrX,chrX,chrX	-,-,+	RLIM,RLIM,SLC16A2	-2986,-2986,-196423
chr7:73244309-73244566	chr7	+	73244402	73244536	True	NM_001305,NM_152559	chr7,chr7	+,-	CLDN4,WBSCR27	656,12369
chr14:89019304-89020886	chr14	+	89019304	89020781	True	NM_207660,NM_207661,NM_001160104,NM_001160103,NM_007039,NM_024824	chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,+,-,+	ZC3H14,ZC3H14,ZC3H14,ZC3H14,PTPN21,ZC3H14	8471,8909,8471,8471,392,8471
chr10:74033179-74033520	chr10	+	74033223	74033569	True	NM_001198800,NM_019058	chr10,chr10	-,+	ASCC1,DDIT4	-57040,107
chr11:111168780-111169180	chr11	+	111168837	111169199	True	NM_001136105,NR_034154	chr11,chr11	+,-	C11orf93,C11orf92	776,1390
chr1:28585610-28585857	chr1	+	28585678	28585848	True	NM_031459,NM_014280	chr1,chr1	+,-	SESN2,DNAJC8	114,-26136
chr7:76140701-76140993	chr7	+	76140816	76141032	True	NM_030570,NR_003262,NM_182684	chr7,chr7,chr7	+,-,+	UPK3B,FDPSL2A,UPK3B	-1122,-36499,-1122
chr7:76140701-76140993	chr7	+	76634711	76634925	False	NR_023383,NM_006682	chr7,chr7	+,-	PMS2P11,FGL2	-24623,194275
chr9:135751131-135752252	chr9	+	135751303	135752192	True	NM_152572,NM_018956	chr9,chr9	-,+	AK8,C9orf9	2056,2097
chrY:24454144-24454973	chrY	+	24454313	24454865	True	NR_001541,NR_002193,NM_152585	chrY,chrY,chrY	-,+,+	TTTY5,RBMY2FP,RBMY1F	-9290,140,144
chr20:34892743-34893485	chr20	+	34892758	34893522	True	NR_027451,NM_015511	chr20,chr20	-,+	LOC647979,C20orf4	-253876,-68363
chr8:95651857-95652513	chr8	+	95651866	95652384	True	NM_017697,NM_001122826,NM_001122827,NM_001122825,NM_001034915,NR_034034	chr8,chr8,chr8,chr8,chr8,chr8	+,+,+,+,+,-	ESRP1,ESRP1,ESRP1,ESRP1,ESRP1,LOC100288748	979,979,979,979,979,-171
chr19:15784476-15786035	chr19	+	15784647	15786037	True	NM_023944,NR_033864	chr19,chr19	+,-	CYP4F12,CYP4F24P	-812,104811
chr5:139963863-139964649	chr5	+	139964242	139964497	True	NM_080670,NM_133174	chr5,chr5	+,-	SLC35A4,APBB3	-19873,-20053
chr8:29203748-29204707	chr8	+	29203748	29204571	True	NM_057158,NM_001394,NM_024567	chr8,chr8,chr8	-,-,+	DUSP4,DUSP4,HMBOX1	1801,3746,-455575
chr1:28562539-28562885	chr1	+	28562538	28562880	True	NM_178191,NM_016311,NM_014280,NM_178190	chr1,chr1,chr1,chr1	+,+,-,+	ATPIF1,ATPIF1,DNAJC8,ATPIF1	13,13,-2996,13
chr14:69443729-69444585	chr14	+	69443920	69444477	True	NM_001130004,NM_001193360,NM_001130005,NM_001102	chr14,chr14,chr14,chr14	-,+,-,-	ACTN1,EXD2,ACTN1,ACTN1	1657,213716,1657,1657
chr14:73957318-73957684	chr14	+	73957449	73957681	True	NM_003744,NM_024644	chr14,chr14	-,+	NUMB,C14orf169	-32163,-38
chr1:27337921-27338909	chr1	+	27337939	27338843	True	NM_052943,NM_001013642	chr1,chr1	-,+	FAM46B,TRNP1	540,-17795
chr20:34542897-34543732	chr20	+	34542920	34543403	True	NM_033630,NM_080834,NM_016558	chr20,chr20,chr20	-,+,-	SCAND1,C20orf152,SCAND1	-372,13125,-72
chr9:125664029-125664299	chr9	+	125664143	125664212	True	NM_018835,NM_001100588,NM_012197	chr9,chr9,chr9	-,-,+	RC3H2,RC3H2,RABGAP1	3409,3409,39075
chr3:132429559-132430732	chr3	+	132429732	132430777	True	NR_002811,NR_037804	chr3,chr3	+,-	NCRNA00119,NPHP3-ACAD11	10408,10576
chr12:64783086-64783509	chr12	+	64783193	64783261	True	NM_007235,NM_001170633,NM_001099676	chr12,chr12,chr12	+,-,-	XPOT,C12orf56,C12orf56	14891,1134,1134
chr19:42212244-42213947	chr19	+	42212469	42213913	True	NM_004363,NM_006890	chr19,chr19	+,-	CEACAM5,CEACAM7	10,-20373
chr5:138717838-138718134	chr5	+	138717907	138718113	True	NM_001033112,NM_016459,NM_005847,NM_152685	chr5,chr5,chr5,chr5	+,-,-,-	PAIP2,MZB1,SLC23A1,SLC23A1	-39824,7542,976,976
chr19:19753880-19754162	chr19	+	19753984	19754211	True	NM_033204,NM_016573	chr19,chr19	+,-	ZNF101,GMIP	25451,294
chr6:106533445-106534291	chr6	+	106533467	106534267	True	NM_004849,NM_001198	chr6,chr6	-,+	ATG5,PRDM1	239478,-73
chr8:23079683-23080374	chr8	+	23079696	23080226	True	NR_033928,NM_003844	chr8,chr8	+,-	LOC389641,TNFRSF10A	2507,2504
chr2:76671098-76672360	chr2	+	76671293	76672325	True	NM_014763,NM_001201335	chr2,chr2	+,-	MRPL19,C2orf3	-797444,-733182
chrX:27997763-27998104	chrX	+	27997780	27998104	True	NM_182506,NM_001017930	chrX,chrX	+,-	MAGEB10,DCAF8L1	-171724,1512
chr8:19797888-19798371	chr8	+	19798031	19798265	True	NM_001135691,NM_000237	chr8,chr8	-,+	SLC18A1,LPL	242508,-1500
chr16:30396667-30397713	chr16	+	30396989	30397583	True	NM_152652,NM_052838	chr16,chr16	+,-	ZNF48,SEPT1	9473,-2818
chr5:176448950-176449235	chr5	+	176448985	176449235	True	NM_012279,NM_001199298	chr5,chr5	+,-	ZNF346,UIMC1	461,-15190
chrX:70753189-70753813	chrX	+	70753289	70753835	True	NM_181672,NM_181673,NR_002226	chrX,chrX,chrX	+,+,-	OGT,OGT,INGX	-429,-429,-40685
chr3:178983815-178984409	chr3	+	178983814	178984436	True	NM_016331,NR_028135,NM_171829,NM_171828,NM_001163677	chr3,chr3,chr3,chr3,chr3	+,-,-,-,-	ZNF639,KCNMB3,KCNMB3,KCNMB3,KCNMB3	57114,-6135,-6135,452,452
chr6:76462315-76463300	chr6	+	76462348	76463125	True	NM_015687,NM_004999	chr6,chr6	-,+	FILIP1,MYO6	-258852,-3497
chr22:29226508-29227671	chr22	+	29226757	29227668	True	NM_005080,NM_032173	chr22,chr22	-,+	XBP1,ZNRF3	-30197,52221
chr20:32306171-32306494	chr20	+	32306341	32306541	True	NM_032819,NM_007238,NM_183397	chr20,chr20,chr20	+,-,-	ZNF341,PXMP4,PXMP4	13266,1645,1645
chr10:133917497-133917769	chr10	+	133917538	133917676	True	NM_001105521,NM_004052	chr10,chr10	+,-	JAKMIP3,BNIP3	636,-122103
chr19:47759408-47759656	chr19	+	47759407	47759647	True	NM_015603,NM_001127242	chr19,chr19	+,-	CCDC9,BBC3	83,-23384
chr7:128503232-128503558	chr7	+	128503345	128503577	True	NM_001198909,NM_001195150,NM_004231,NM_001135914	chr7,chr7,chr7,chr7	+,+,+,-	ATP6V1F,LOC100130705,ATP6V1F,KCP	-539,2886,-539,47246
chr17:8214096-8214736	chr17	+	8214291	8214737	True	NM_025014,NM_201520,NM_173728	chr17,chr17,chr17	+,-,+	ARHGEF15,SLC25A35,ARHGEF15	-202,-16121,-786
chr1:212963514-212963984	chr1	+	212963733	212963970	True	NM_001042553,NM_001042552,NM_001146170,NM_001146171,NM_001146169,NM_001042549,NM_015471	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-,-	TATDN3,TATDN3,TATDN3,TATDN3,TATDN3,NSL1,NSL1	1199,1199,1199,1199,1199,1230,1230
chr1:156186644-156187371	chr1	+	156187074	156187139	True	NM_001199654,NM_007221,NM_198406,NM_001199662,NM_001199663,NM_001199661,NM_001199653,NM_001199664	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,+,+,+,+,+	PMF1,PMF1,PAQR6,PMF1-BGLAP,PMF1-BGLAP,PMF1-BGLAP,PMF1,PMF1-BGLAP	-4346,-4346,30708,-4346,-4346,-4346,-4346,-4346
chr17:40836305-40836663	chr17	+	40836392	40836627	True	NM_016602,NM_024927,NM_003632	chr17,chr17,chr17	-,-,+	CCR10,PLEKHH3,CNTNAP1	-2547,-7344,-1811
chr5:179722042-179722361	chr5	+	179722041	179722410	True	NM_001135044,NM_139068,NM_139069,NM_015455,NM_139070,NM_002752	chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,+,-,-	MAPK9,MAPK9,MAPK9,CNOT6,MAPK9,MAPK9	-2970,-2970,-2970,199006,-2970,-2970
chr11:100552943-100554089	chr11	+	100553143	100554134	True	NM_001202474,NM_152432	chr11,chr11	-,+	PGR,ARHGAP42	445717,4272
chr11:60668784-60670502	chr11	+	60669097	60670519	True	NM_014502,NM_024092	chr11,chr11	-,+	PRPF19,TMEM109	3592,10851
chr16:4524773-4525043	chr16	+	4524842	4524928	True	NM_020677,NM_002134,NM_001127204,NM_001127206	chr16,chr16,chr16,chr16	-,+,+,+	NMRAL1,HMOX2,HMOX2,HMOX2	20,1412,1412,-181
chr19:38798021-38798843	chr19	+	38798074	38798783	True	NM_001039673,NM_001145461,NM_001039671,NM_001039672,NM_001145462,NM_033520,NM_033557,NM_001145463	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,+,-,-	YIF1B,YIF1B,YIF1B,YIF1B,YIF1B,C19orf33,YIF1B,YIF1B	7874,7713,7713,7874,7713,-3321,1777,7874
chr2:64754636-64755460	chr2	+	64754888	64755244	True	NM_014755,NM_001002243,NM_017657,NM_203437	chr2,chr2,chr2,chr2	-,+,+,+	SERTAD2,AFTPH,AFTPH,AFTPH	125861,-3501,-3501,-3501
chr11:3403323-3404836	chr11	+	3403616	3404751	True	NM_001130519,NM_001130520,NM_007152,NR_024248	chr11,chr11,chr11,chr11	-,-,-,+	ZNF195,ZNF195,ZNF195,LOC650368	-3168,-3168,-3168,-1482
chr1:158735774-158736088	chr1	+	158735785	158736137	True	NM_001005185,NM_001005184	chr1,chr1	-,+	OR6N1,OR6K6	385,-11230
chr17:34135991-34136446	chr17	+	34136078	34136334	True	NM_001032278,NM_139215,NM_003487	chr17,chr17,chr17	-,+,+	MMP28,TAF15,TAF15	-13438,153,153
chr4:114683886-114685183	chr4	+	114683896	114685192	True	NM_001221,NM_172115,NM_172129,NM_172127,NM_172114,NM_172128,NR_031641	chr4,chr4,chr4,chr4,chr4,chr4,chr4	-,-,-,-,-,-,+	CAMK2D,CAMK2D,CAMK2D,CAMK2D,CAMK2D,CAMK2D,MIR1243	-813,-813,-813,-813,-813,-813,-655928
chr12:108731277-108731994	chr12	+	108731295	108732037	True	NM_001142344,NM_004072,NM_007076,NM_001142343	chr12,chr12,chr12,chr12	-,-,+,-	CMKLR1,CMKLR1,FICD,CMKLR1	1113,1113,177013,1113
chr5:173043448-173043736	chr5	+	173043462	173043782	True	NR_027109,NM_001159651,NM_138369	chr5,chr5,chr5	+,-,-	LOC285593,BOD1,BOD1	-36856,38,38
chr14:24898341-24898979	chr14	+	24898715	24898933	True	NM_001039771,NM_015299	chr14,chr14	-,+	CBLN3,KHNYN	16,207
chr19:43848674-43849190	chr19	+	43848794	43849002	True	NM_020406,NR_026881,NM_002784	chr19,chr19,chr19	+,+,-	CD177,PRG1,PSG9	8822,4205,-75112
chr9:130691448-130692049	chr9	+	130691731	130691983	True	NM_001135219,NM_001018078,NM_173492,NM_003863	chr9,chr9,chr9,chr9	-,+,-,-	PIP5KL1,FPGS,PIP5KL1,DPM2	1143,-126274,-1961,8830
chr12:117320960-117321817	chr12	+	117320959	117321424	True	NM_003806,NM_012174	chr12,chr12	-,+	HRK,FBXW8	-1727,27336
chr3:47324547-47324914	chr3	+	47324555	47324961	True	NM_022342,NM_182902,NM_001134878,NM_025010	chr3,chr3,chr3,chr3	-,-,-,+	KIF9,KIF9,KIF9,KLHL18	-218,-218,-218,-276
chr18:22020530-22021199	chr18	+	22020529	22021018	True	NM_018439,NM_080597	chr18,chr18	+,-	IMPACT,OSBPL1A	-13973,-42739
chr8:70042109-70042613	chr8	+	70042165	70042449	True	NM_001128204,NM_001146009	chr8,chr8	+,-	SULF1,SLCO5A1	336409,703005
chr19:5452197-5452794	chr19	+	5452360	5452672	True	NM_130855,NM_181710	chr19,chr19	-,+	PTPRS,ZNRF4	-111546,2753
chr5:169933333-169934181	chr5	+	169933445	169934206	True	NM_001034837,NM_004137,NM_014592	chr5,chr5,chr5	+,-,+	KCNIP1,KCNMB1,KCNIP1	-2448,-116807,-2448
chr10:104614218-104615813	chr10	+	104614250	104615855	True	NM_000102,NM_144591,NR_037644,NM_001136200	chr10,chr10,chr10,chr10	-,+,+,+	CYP17A1,C10orf32,C10orf32-AS3MT,C10orf32	-16960,-334,-334,-334
chr19:17423144-17423620	chr19	+	17423263	17423509	True	NM_024050,NM_024527,NM_023937	chr19,chr19,chr19	+,-,+	DDA1,ABHD8,MRPL34	-2977,-8981,-6837
chr10:27389390-27390208	chr10	+	27389396	27389918	True	NM_014915,NM_001172303	chr10,chr10	-,+	ANKRD26,MASTL	31,53834
chr9:131590576-131591259	chr9	+	131590788	131591194	True	NM_016390,NM_004435	chr9,chr9	-,+	C9orf114,ENDOG	941,-10060
chr12:75782403-75783225	chr12	+	75782438	75783269	True	NM_152436,NM_032606	chr12,chr12	+,-	GLIPR1L2,CAPS2	1619,-58602
chr3:75445598-75446761	chr3	+	75445643	75446770	True	NR_031714,NR_024241	chr3,chr3	+,-	MIR1324,FAM86DP	233143,37546
chr2:201981597-201982637	chr2	+	201981760	201982407	True	NM_173822,NM_001202517,NM_001202516,NM_001202519,NM_001127183,NM_001127184,NM_003879	chr2,chr2,chr2,chr2,chr2,chr2,chr2	-,+,+,+,+,+,+	FAM126B,CFLAR,CFLAR,CFLAR,CFLAR,CFLAR,CFLAR	-45368,-934,-934,-934,861,-934,-934
chr19:54280011-54281262	chr19	+	54280780	54281311	True	NM_033297,NR_029865,NR_029864	chr19,chr19,chr19	-,+,+	NLRP12,MIR372,MIR371	30698,9832,9617
chr1:203764165-203764579	chr1	+	203764213	203764607	True	NM_001174108,NM_014827,NR_027902	chr1,chr1,chr1	+,+,-	ZBED6,ZC3H11A,C1orf157	2043,143,245835
chr11:76812594-76812817	chr11	+	76812648	76812742	True	NM_182833,NM_006189	chr11,chr11	-,+	GDPD4,OMP	185771,1143
chr22:44287102-44287307	chr22	+	44287102	44287236	True	NM_001177675,NM_025225,NM_138814	chr22,chr22,chr22	-,+,-	PNPLA5,PNPLA3,PNPLA5	707,32382,707
chr1:154242789-154244242	chr1	+	154243005	154244019	True	NM_001018837,NM_138740,NM_006118	chr1,chr1,chr1	+,-,+	HAX1,C1orf43,HAX1	1019,-49732,1019
chr7:87853991-87855615	chr7	+	87854062	87855579	True	NM_021723,NM_003130,NM_198901	chr7,chr7,chr7	+,-,-	ADAM22,SRI,SRI	-290559,-4669,780
chr15:25683374-25683577	chr15	+	25683392	25683454	True	NM_130839,NR_001295	chr15,chr15	-,+	UBE3A,SNORD109A	724,-159953
chr15:52387526-52388840	chr15	+	52387570	52388515	True	NM_002748,NM_020396	chr15,chr15	+,-	MAPK6,BCL2L10	-76210,16518
chr13:28543203-28543433	chr13	+	28543261	28543481	True	NM_001265,NR_002162	chr13,chr13	-,+	CDX2,ATP5EP2	42,-23969
chr17:18324999-18325727	chr17	+	18325014	18325766	True	NM_148918,NR_001443	chr17,chr17	-,+	SHMT1,LOC339240	-58158,130
chr17:18324999-18325727	chr17	-	16753595	16754047	False	NR_026810,NR_029392	chr17,chr17	+,-	FAM106C,KRT16P2	-61589,-17448
chr17:18324999-18325727	chr17	-	20425269	20425721	False	NM_001190790,NR_029393	chr17,chr17	+,-	CDRT15L2,KRT16P3	57315,-17458
chr3:183773423-183774685	chr3	+	183773709	183774731	True	NM_001023587,NM_130770	chr3,chr3	-,+	ABCC5,HTR3C	-37982,-2932
chr19:12913647-12914136	chr19	+	12913957	12914192	True	NM_005809,NM_181738,NM_006397	chr19,chr19,chr19	-,-,+	PRDX2,PRDX2,RNASEH2A	-1263,-1263,3235
chr22:19742472-19742716	chr22	+	19742667	19742745	True	NM_005992,NM_024627,NM_080647,NM_080646	chr22,chr22,chr22,chr22	+,-,+,+	TBX1,C22orf29,TBX1,TBX1	1480,99676,1480,1480
chr20:32397505-32398951	chr20	+	32397850	32398838	True	NM_176812,NM_183397	chr20,chr20	+,-	CHMP4B,PXMP4	271,-89714
chr10:51573266-51574004	chr10	+	51573458	51573766	True	NM_005437,NM_006327,NM_001145263,NM_001145262,NM_001145261,NM_001145260	chr10,chr10,chr10,chr10,chr10,chr10	+,-,+,+,+,+	NCOA4,TIMM23,NCOA4,NCOA4,NCOA4,NCOA4	-1153,49620,-8409,2518,-8409,-8409
chr20:38891274-38891903	chr20	+	38891287	38891908	True	NM_003286,NM_005461	chr20,chr20	+,-	TOP1,MAFB	765553,426019
chr8:97518959-97520111	chr8	+	97519410	97520092	True	NM_015942,NM_002998	chr8,chr8	-,+	MTERFD1,SDC2	-245614,-13583
chr1:201797720-201798302	chr1	+	201797791	201798171	True	NM_012134,NM_018085	chr1,chr1	-,+	LMOD1,IPO9	117596,116
chr1:10853417-10853811	chr1	+	10853431	10853725	True	NM_001079843,NM_007375,NM_017766	chr1,chr1,chr1	-,+,-	CASZ1,TARDBP,CASZ1	3034,218953,3034
chr2:23617401-23618441	chr2	+	23617523	23618342	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	531643,-9290
chr7:44783089-44785021	chr7	+	44783435	44784735	True	NM_138635,NM_031449	chr7,chr7	-,+	H2AFV,ZMIZ2	103050,3794
chr19:55667732-55668103	chr19	+	55667764	55668152	True	NM_001126132,NM_001126133,NM_017729,NM_178837,NM_000363,NM_003283	chr19,chr19,chr19,chr19,chr19,chr19	-,-,+,-,-,-	TNNT1,TNNT1,EPS8L1,C19orf51,TNNI3,TNNT1	-7158,-7158,-76055,9916,998,-7158
chr3:196012974-196013309	chr3	+	196013112	196013278	True	NM_005017,NM_152672	chr3,chr3	-,+	PCYT1A,OSTalpha	1366,-69781
chr11:560533-560958	chr11	+	560590	560746	True	NR_029623,NM_173573,NM_001143994,NM_001143993,NM_003475	chr11,chr11,chr11,chr11,chr11	-,-,+,+,+	MIR210,C11orf35,RASSF7,RASSF7,RASSF7	7502,83,703,224,703
chr6:136872187-136872988	chr6	+	136872210	136873004	True	NM_000288,NM_001198616,NM_001198617,NM_003980	chr6,chr6,chr6,chr6	+,-,-,-	PEX7,MAP7,MAP7,MAP7	270697,-253,-253,-253
chr19:11642688-11643421	chr19	+	11642836	11643194	True	NM_001142464,NM_001142465,NM_016581,NR_024551,NM_001299	chr19,chr19,chr19,chr19,chr19	-,-,-,-,+	ECSIT,ECSIT,ECSIT,ECSIT,CNN1	-2849,-2849,-2849,-3156,6384
chr8:37822184-37822528	chr8	+	37822472	37822550	True	NM_000025,NM_004095	chr8,chr8	-,+	ADRB3,EIF4EBP1	1684,65469
chr13:37592464-37593946	chr13	+	37592588	37593894	True	NM_181503,NM_013338	chr13,chr13	+,-	EXOSC8,ALG5	-17969,-19084
chr20:44443769-44444071	chr20	+	44443795	44444102	True	NM_181803,NM_181802,NM_181801,NM_181800,NM_007019,NM_003279,NM_181799	chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,+,+,+,+,-,+	UBE2C,UBE2C,UBE2C,UBE2C,UBE2C,TNNC2,UBE2C	-2598,-2598,-2181,-2598,-2598,11901,-2598
chr1:14714798-14715897	chr1	+	14715028	14715946	True	NM_015209,NR_027136	chr1,chr1	+,-	KAZN,C1orf126	209266,763064
chr7:131359487-131359998	chr7	+	131359557	131360035	True	NM_005397,NM_013255	chr7,chr7	-,+	PODXL,MKLN1	-118181,-347013
chr14:106438162-106438389	chr14	+	106438212	106438306	True	NR_026800	chr14	+	KIAA0125	-54425
chr4:175236136-175236846	chr4	+	175236146	175236708	True	NM_012180,NM_001145314	chr4,chr4	-,+	FBXO8,KIAA1712	-30744,-31142
chrX:151085362-151085864	chrX	+	151085393	151085723	True	NR_029973,NM_002362,NM_001011548,NM_001011549,NM_001011550	chrX,chrX,chrX,chrX,chrX	-,+,+,+,+	MIR452,MAGEA4,MAGEA4,MAGEA4,MAGEA4	42511,-735,-4083,-47,1036
chrX:151085362-151085864	chrX	+	151083349	151083679	False	NR_029973,NM_002362,NM_001011548,NM_001011549,NM_001011550	chrX,chrX,chrX,chrX,chrX	-,+,+,+,+	MIR452,MAGEA4,MAGEA4,MAGEA4,MAGEA4	44555,1029,-2039,1717,3080
chr2:130733289-130733890	chr2	+	130733514	130733796	True	NR_036537,NM_032144	chr2,chr2	-,+	LOC100131320,RAB6C	4299,3438
chr4:103996428-103997219	chr4	+	103996620	103997238	True	NM_001008388,NM_178833	chr4,chr4	+,-	CISD2,NHEDC2	-206536,982
chr2:9614149-9614460	chr2	+	9614163	9614496	True	NM_001039613,NM_022334	chr2,chr2	+,-	IAH1,ITGB1BP1	173,-50520
chr2:135620108-135621130	chr2	+	135620113	135621031	True	NM_138326,NR_036549	chr2,chr2	+,-	ACMSD,LOC100129961	-23978,55195
chr11:74700566-74702242	chr11	+	74700585	74702068	True	NM_006656,NM_182969	chr11,chr11	+,-	NEU3,XRRA1	-686,-40353
chr1:117115806-117116652	chr1	+	117115837	117116621	True	NM_001779,NM_001144822,NR_031564,NR_026665	chr1,chr1,chr1,chr1	-,-,+,-	CD58,CD58,MIR320B1,CD58	-2122,-2122,97749,-2122
chr18:23634795-23635353	chr18	+	23634996	23635126	True	NM_001007559,NM_001025096	chr18,chr18	-,+	SS18,PSMA8	35541,78689
chr12:2026837-2027047	chr12	+	2026841	2027085	True	NM_001163926,NM_172364	chr12,chr12	+,-	LRTM2,CACNA2D4	-97459,835
chr2:128153955-128154764	chr2	+	128154074	128154502	True	NM_000312,NM_006609	chr2,chr2	+,-	PROC,MAP3K2	21493,-53304
chr2:128433797-128435078	chr2	+	128433825	128434826	True	NM_001161404,NM_001136037,NM_001161403,NM_032740	chr2,chr2,chr2,chr2	-,-,-,+	LIMS2,LIMS2,LIMS2,SFT2D3	4584,-1061,-1061,23770
chr4:6695807-6696191	chr4	+	6695927	6696167	True	NM_005980,NM_203462	chr4,chr4	+,-	S100P,MRFAP1L1	-412,15489
chr5:138883216-138883467	chr5	+	138883345	138883411	True	NM_198282,NM_003339	chr5,chr5	-,+	TMEM173,UBE2D2	-21002,57339
chr2:157303359-157304778	chr2	+	157303459	157304507	True	NM_006186,NM_000408	chr2,chr2	-,+	NR4A2,GPD2	-114172,-10611
chrX:64711959-64713006	chrX	+	64712045	64712706	True	NM_001010888,NM_001170649	chrX,chrX	+,-	ZC3H12B,LAS1L	-3484,42031
chr8:30013406-30013776	chr8	+	30013636	30013782	True	NM_006571,NM_001100916	chr8,chr8	+,-	DCTN6,MBOAT4	30,-11436
chr9:34635372-34635667	chr9	+	34635397	34635615	True	NM_147157,NM_005866,NM_000155,NM_001017363	chr9,chr9,chr9,chr9	-,-,+,-	SIGMAR1,SIGMAR1,GALT,ARID3C	2203,2203,11019,-7386
chr8:145722738-145723174	chr8	+	145722782	145723220	True	NM_032902,NM_005309,NM_004260	chr8,chr8,chr8	+,+,-	PPP1R16A,GPT,RECQL4	-724,6244,20040
chr4:84408083-84408744	chr4	+	84408090	84408555	True	NM_139076,NM_016067	chr4,chr4	-,+	FAM175A,MRPS18C	-1800,-31023
chr15:78235482-78235763	chr15	+	78235492	78235590	True	NM_001101404,NR_027024	chr15,chr15	+,-	SH2D7,LOC645752	149336,-16304
chr15:78235482-78235763	chr15	-	72930677	72930727	False	NR_002780,NM_018652	chr15,chr15	-,+	HIGD2B,GOLGA6B	47813,16310
chr15:78235482-78235763	chr15	+	74391192	74391242	False	NM_001130136,NM_001038640	chr15,chr15	+,-	ISLR2,GOLGA6A	30472,-16301
chrX:40591693-40592310	chrX	+	40592041	40592347	True	NM_004229,NM_001195522	chrX,chrX	-,+	MED14,LOC347411	2514,-109274
chr20:61149282-61149676	chr20	+	61149363	61149455	True	NR_033263,NR_029780,NM_178463	chr20,chr20,chr20	-,+,+	C20orf200,MIR1-1,C20orf166	-595,2057,-1754
chr11:63740631-63740999	chr11	+	63740759	63740869	True	NM_004074,NM_173587	chr11,chr11	+,-	COX8A,RCOR2	1209,-56443
chr3:4506964-4507761	chr3	+	4507227	4507776	True	NM_001099952,NM_182760,NM_001164675,NM_001164674	chr3,chr3,chr3,chr3	+,-,-,-	ITPR1,SUMF1,SUMF1,SUMF1	27255,1247,1247,1247
chr19:46474974-46476049	chr19	+	46475217	46475993	True	NM_002516,NM_001080402	chr19,chr19	-,+	NOVA2,CCDC61	714,22345
chrX:101475981-101476907	chrX	+	101476086	101476932	True	NM_001012978,NM_017809,NM_001099686	chrX,chrX,chrX	-,+,+	BEX5,NXF2,NXF2B	-65100,-5864,-5864
chrX:101475981-101476907	chrX	-	101720091	101720937	False	NM_017809,NR_002216,NM_001099686	chrX,chrX,chrX	-,+,-	NXF2,NXF4,NXF2B	5852,83955,5852
chr8:110657265-110657516	chr8	+	110657327	110657414	True	NM_001099750,NM_004215,NM_001099751,NM_001099747,NM_001099753,NM_001099752,NM_001099755,NM_001099754,NM_001099756,NM_017786,NM_001099748,NM_001099749	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,+,-,-,-,-,-,-,-,-,-,-	SYBU,EBAG9,SYBU,SYBU,SYBU,SYBU,SYBU,SYBU,SYBU,SYBU,SYBU,SYBU	3769,-105068,459,3769,-276,459,-276,-276,-1908,3769,3769,3769
chr1:40138342-40140076	chr1	+	40138617	40140099	True	NM_203456,NM_032526	chr1,chr1	+,-	PPIE,NT5C1A	64417,-907
chr17:3211014-3211638	chr17	+	3211077	3211612	True	NM_002550,NR_024128	chr17,chr17	-,+	OR3A1,OR3A4	-15201,1926
chr14:20020478-20021096	chr14	+	20020546	20021074	True	NM_001145442,NM_172194	chr14,chr14	-,+	POTEM,OR4Q3	-274,194512
chr14:20020478-20021096	chr14	-	19552553	19552603	False	NM_001145442,NR_027480,NM_001005356	chr14,chr14,chr14	-,+,+	POTEM,POTEG,POTEG	467719,761,761
chr9:36170950-36171633	chr9	+	36171039	36171611	True	NM_001190383,NM_005893	chr9,chr9	-,+	GNE,CCIN	86935,-1701
chr14:21571983-21572368	chr14	+	21572065	21572407	True	NM_016423,NM_001101672,NM_001146683,NM_001102454	chr14,chr14,chr14,chr14	-,-,+,-	ZNF219,ZNF219,C14orf176,ZNF219	-5257,-4892,-5020,506
chr10:105128354-105128826	chr10	+	105128537	105128673	True	NM_006951,NM_032154	chr10,chr10	+,-	TAF5,PCGF6	-864,-17646
chr6:119465353-119465646	chr6	+	119465525	119465693	True	NM_001100411,NM_014034	chr6,chr6	-,+	FAM184A,ASF1A	4715,-250335
chr21:31690277-31692132	chr21	+	31690416	31692143	True	NM_181599,NM_203405	chr21,chr21	+,-	KRTAP13-1,KRTAP26-1	76248,514
chr21:44497525-44498211	chr21	+	44497819	44498074	True	NM_000394,NM_000071,NM_001178009,NM_001178008	chr21,chr21,chr21,chr21	+,-,-,-	CRYAA,CBS,CBS,CBS	91066,-1779,-1347,-1347
chr9:100457404-100459051	chr9	+	100457404	100458933	True	NM_000380,NR_027302,NM_002486	chr9,chr9,chr9	-,-,+	XPA,XPA,NCBP1	809,809,-61752
chr17:47785466-47786309	chr17	+	47785552	47786254	True	NM_005827,NM_001199155	chr17,chr17	-,+	SLC35B1,MYST2	-270,79726
chr16:2010314-2011199	chr16	+	2010552	2011199	True	NR_003142,NM_174903,NM_005061,NM_002952,NR_002327,NR_002326,NR_003020,NM_004548	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,-,-,-,-,+,+	SNHG9,RNF151,RPL3L,RPS2,SNORA10,SNORA64,SNORA78,NDUFB10	3797,5675,-5873,3679,1319,1959,3985,-1086
chr17:27334938-27335346	chr17	+	27334986	27335332	True	NM_001098635,NM_178860,NM_016518	chr17,chr17,chr17	-,-,+	SEZ6,SEZ6,PIPOX	-1905,-1905,34585
chr13:37632909-37633194	chr13	+	37633012	37633226	True	NM_017569,NM_001014286,NM_181503	chr13,chr13,chr13	-,-,+	FAM48A,FAM48A,EXOSC8	674,674,-58386
chrX:107017604-107018420	chrX	+	107017603	107018469	True	NM_198057,NM_012216	chrX,chrX	-,+	TSC22D3,MID2	598,50614
chr16:50322682-50323240	chr16	+	50322682	50323094	True	NM_001114,NM_001173984	chr16,chr16	+,-	ADCY7,BRD7	-918,79805
chr19:36262591-36263152	chr19	+	36262781	36262864	True	NM_052948,NM_144617,NM_001172630	chr19,chr19,chr19	+,-,+	ARHGAP33,HSPB6,ARHGAP33	3552,-14851,3552
chr3:94225973-94226377	chr3	+	94226141	94226361	True	NR_015400,NM_001195643	chr3,chr3	+,-	LOC255025,DHFRL1	430745,-444074
chr11:66404643-66405475	chr11	+	66404975	66405416	True	NM_002896,NM_001198844,NM_031492,NM_001198843	chr11,chr11,chr11,chr11	+,+,-,+	RBM4,RBM4,RBM4B,RBM4	671,671,39910,671
chr17:77019486-77019689	chr17	+	77019504	77019696	True	NM_198594,NM_030968,NM_138793	chr17,chr17,chr17	+,+,-	C1QTNF1,C1QTNF1,CANT1	554,554,-13605
chr3:53152952-53154468	chr3	+	53153238	53154450	True	NM_006254,NM_052859	chr3,chr3	+,-	PRKCD,RFT1	40772,10078
chr5:34192173-34192612	chr5	+	34192187	34192637	True	NM_016568,NR_037951	chr5,chr5	+,-	RXFP3,C1QTNF3-AMACR	-255747,-67554
chr10:4723263-4723693	chr10	+	4723359	4723723	True	NR_024475,NR_015425	chr10,chr10	-,+	LOC100216001,LOC338588	-3097,-25068
chr20:35087467-35088169	chr20	+	35087603	35087776	True	NM_183006,NM_032214,NM_001042486	chr20,chr20,chr20	+,-,+	DLGAP4,SLA2,DLGAP4	2365,186839,2065
chr14:102768940-102769420	chr14	+	102769036	102769131	True	NM_014226,NM_018335	chr14,chr14	-,+	RAGE,ZNF839	2457,16964
chr3:33483402-33484039	chr3	+	33483426	33484078	True	NM_001171713,NM_014517,NM_001128161,NM_001128160	chr3,chr3,chr3,chr3	+,-,-,-	FBXL2,UBP1,UBP1,UBP1	-164541,-1556,-1529,-1556
chr12:56842435-56842733	chr12	+	56842535	56842717	True	NM_003920,NM_012064,NM_207344	chr12,chr12,chr12	-,-,+	TIMELESS,MIP,SPRYD4	533,5768,19583
chr7:150755405-150755755	chr7	+	150755436	150755708	True	NM_004769,NM_001164410,NM_020321,NM_020322,NM_001199693,NM_001199692,NM_003040,NM_004935,NM_001199694	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,-,+,+,+,+,+,-,+	ACCN3,CDK5,ACCN3,ACCN3,SLC4A2,SLC4A2,SLC4A2,CDK5,SLC4A2	-9882,-384,-9882,-9882,3925,-188,948,-384,4030
chr20:55108222-55108932	chr20	+	55108499	55108902	True	NM_001012971,NM_001013646,NM_080615	chr20,chr20,chr20	+,+,-	C20orf106,C20orf107,GCNT7	-8765,-248,-7518
chr1:228329470-228330915	chr1	+	228329571	228330887	True	NM_000858,NM_020435,NM_181465,NM_001159390,NM_001159391	chr1,chr1,chr1,chr1,chr1	+,+,-,+,+	GUK1,GJC2,MRPL55,GUK1,GUK1	-1693,6665,-32558,-1693,1516
chr19:16046238-16047032	chr19	+	16046265	16047058	True	NM_001004465,NM_021187,NM_001128932	chr19,chr19,chr19	+,-,-	OR10H4,CYP4F11,CYP4F11	12759,-589,-589
chr17:48136727-48137403	chr17	+	48136734	48137280	True	NM_005220,NM_002204,NM_005501	chr17,chr17,chr17	-,+,+	DLX3,ITGA3,ITGA3	-64146,-3445,-3445
chr2:164593262-164593468	chr2	+	164593270	164593403	True	NM_012198,NM_018086	chr2,chr2	+,-	GCA,FIGN	-1392738,-757
chr7:123579908-123580583	chr7	+	123579913	123580367	True	NM_001174046,NM_001136002	chr7,chr7	+,-	SPAM1,TMEM229A	-14055,93218
chrX:152712462-152712679	chrX	+	152712528	152712712	True	NM_080701,NM_001136273	chrX,chrX	-,+	TREX2,ZFP92	-583,-28798
chr3:184870374-184870589	chr3	+	184870386	184870534	True	NM_004721,NM_001025266	chr3,chr3	+,-	MAP3K13,C3orf70	210435,318
chr17:4475309-4476895	chr17	+	4475371	4476522	True	NM_198501,NM_153338	chr17,chr17	+,-	SMTNL2,GGT6	10753,-11495
chr19:10513321-10513544	chr19	+	10513337	10513561	True	NM_007065,NM_001111307,NR_031592	chr19,chr19,chr19	-,+,-	CDC37,PDE4A,MIR1181	760,17771,703
chr22:19276665-19278034	chr22	+	19277042	19278030	True	NM_001835,NM_007098,NM_003776	chr22,chr22,chr22	-,-,+	CLTCL1,CLTCL1,MRPL40	1259,1259,142005
chr1:169587714-169589368	chr1	+	169587830	169588935	True	NM_003005,NM_018186	chr1,chr1	-,+	SELP,C1orf112	10507,175614
chr4:140064906-140065388	chr4	+	140064988	140065270	True	NM_201999,NM_012118	chr4,chr4	-,+	ELF2,CCRN4L	-4382,-128096
chr17:34990719-34991830	chr17	+	34990729	34991711	True	NM_024864,NM_001033580	chr17,chr17	+,-	MRM1,MYO19	-32756,-99424
chr15:42839915-42840179	chr15	+	42839957	42840225	True	NM_153260,NM_001130447,NM_018097	chr15,chr15,chr15	-,+,+	LRRC57,HAUS2,HAUS2	827,785,785
chr19:52800791-52801316	chr19	+	52800897	52801349	True	NM_001102657,NM_144684	chr19,chr19	-,+	ZNF836,ZNF480	-126001,-522
chr1:43208149-43209056	chr1	+	43208289	43209088	True	NM_024097,NM_001123395,NM_148960,NM_001185117	chr1,chr1,chr1,chr1	+,-,-,-	C1orf50,CLDN19,CLDN19,CLDN19	23827,-2364,-2364,-2364
chr5:110408905-110409254	chr5	+	110408957	110409299	True	NM_001039763,NM_033035,NR_033425	chr5,chr5,chr5	-,+,+	TMEM232,TSLP,TSLP	-346507,-1618,4
chr17:30468064-30469073	chr17	+	30468273	30469060	True	NM_001033566,NR_002222,NM_018307,NM_001033568	chr17,chr17,chr17,chr17	+,-,+,+	RHOT1,ARGFXP2,RHOT1,RHOT1	412,9587,412,412
chrX:115828290-115828969	chrX	+	115828293	115828625	True	NM_007231,NM_001017978	chrX,chrX	+,-	SLC6A14,CXorf61	-260597,-234156
chr1:202185863-202186166	chr1	+	202185959	202186155	True	NM_001017404,NR_037664	chr1,chr1	+,-	LGR6,PTPN7	-2727,-55243
chr8:20040552-20041903	chr8	+	20040563	20041933	True	NM_003053,NM_001135691,NM_001693,NM_001142325,NM_001142324	chr8,chr8,chr8,chr8,chr8	-,-,+,-,-	SLC18A1,SLC18A1,ATP6V1B2,SLC18A1,SLC18A1	-16,-16,12770,-16,-16
chr2:160143803-160145376	chr2	+	160143835	160145152	True	NM_001128213,NM_001128212,NM_033394,NM_152528	chr2,chr2,chr2,chr2	-,-,+,-	WDSUB1,WDSUB1,TANC1,WDSUB1	-732,-599,-318740,-772
chr12:93412540-93412990	chr12	+	93412664	93412968	True	NM_001004330,NM_003566	chr12,chr12	+,-	PLEKHG7,EEA1	-282450,-89557
chr14:105564049-105564850	chr14	+	105564078	105564776	True	NM_174891,NM_013345	chr14,chr14	+,-	C14orf79,GPR132	-111513,-32324
chr10:10981771-10982198	chr10	+	10981932	10982164	True	NM_001025077,NR_015413	chr10,chr10	+,-	CELF2,LOC254312	65094,12012
chr15:76196710-76196917	chr15	+	76196772	76196900	True	NM_147188,NR_003136,NM_012170,NR_037623	chr15,chr15,chr15,chr15	+,-,+,+	FBXO22,FBXO22OS,FBXO22,FBXO22	-623,28621,-623,-623
chr4:187644001-187644356	chr4	+	187644000	187644372	True	NM_000128,NM_005245	chr4,chr4	+,-	F11,FAT1	-456936,665
chr1:18429607-18429842	chr1	+	18429646	18429808	True	NM_032880,NM_018715	chr1,chr1	+,-	IGSF21,RCC2	4431,-663426
chr5:96050636-96052221	chr5	+	96050690	96052051	True	NM_173060,NM_016442	chr5,chr5	+,-	CAST,ERAP1	-12248,91898
chr2:63273081-63274002	chr2	+	63273179	63274025	True	NR_027069,NM_014562,NM_001199770,NR_033389	chr2,chr2,chr2,chr2	-,+,+,-	LOC100132215,OTX1,OTX1,LOC100132215	871,3911,3166,1681
chr1:246948915-246949647	chr1	+	246949298	246949459	True	NR_015422,NM_015446	chr1,chr1	+,-	LOC149134,AHCTF1	3459,145324
chr17:63054217-63055120	chr17	+	63054268	63054996	True	NM_006572,NM_001165933	chr17,chr17	-,+	GNA13,RGS9	-1348,78459
chr10:98478368-98479688	chr10	+	98478641	98479638	True	NM_152309,NM_001170765	chr10,chr10	-,+	PIK3AP1,LCOR	694,112378
chr20:31803132-31804275	chr20	+	31803149	31803945	True	NM_001042439,NM_178466,NM_016082	chr20,chr20,chr20	+,+,-	C20orf71,C20orf71,CDK5RAP1	1189,1189,185442
chr8:124551215-124551819	chr8	+	124551402	124551830	True	NM_148177,NM_018024,NM_058229	chr8,chr8,chr8	-,+,-	FBXO32,WDYHV1,FBXO32	-7019,-122501,1666
chr19:59029436-59030507	chr19	+	59029597	59030345	True	NM_012254,NM_032792,NM_005762	chr19,chr19,chr19	-,-,+	SLC27A5,ZBTB45,TRIM28	-6165,626,25490
chr20:57580396-57581331	chr20	+	57580482	57581186	True	NM_001336,NM_030773	chr20,chr20	-,+	CTSZ,TUBB1	1173,13122
chr2:111490537-111491001	chr2	+	111490644	111491042	True	NM_004336,NM_001142807	chr2,chr2	-,+	BUB1,ACOXL	-54960,-545
chr14:24505488-24505741	chr14	+	24505657	24505785	True	NM_006177,NM_001082488	chr14,chr14	-,+	NRL,DHRS4L1	48097,2
chr14:24505488-24505741	chr14	+	24458103	24458154	False	NR_023922,NM_198083	chr14,chr14	-,+	C14orf167,DHRS4L2	-33805,-128
chr4:4536709-4537866	chr4	+	4536790	4537786	True	NR_037888,NM_016930	chr4,chr4	+,-	LOC100507266,STX18	6071,6042
chr13:27845358-27845841	chr13	+	27845560	27845804	True	NM_182488,NM_206827	chr13,chr13	-,+	USP12,RASL11A	-99527,-1147
chr2:26698949-26699256	chr2	+	26698984	26699168	True	NM_194322,NM_194323,NM_004802,NM_145038	chr2,chr2,chr2,chr2	-,-,-,+	OTOF,OTOF,OTOF,CCDC164	1792,1792,1792,-74251
chr13:20439038-20439294	chr13	+	20439072	20439274	True	NM_001142684,NM_001039649,NM_003453,NM_001039650	chr13,chr13,chr13,chr13	-,-,+,-	ZMYM5,ZMYM5,ZMYM2,ZMYM5	-1296,-1296,93535,-1296
chr19:53192339-53193070	chr19	+	53192338	53192970	True	NR_003936,NR_023311	chr19,chr19	-,+	ZNF83,ZNF137P	966,-92454
chr20:37555046-37555307	chr20	+	37555047	37555269	True	NM_030919,NR_027124	chr20,chr20	+,-	FAM83D,LOC339568	-143,298172
chr1:40420297-40420544	chr1	+	40420341	40420439	True	NM_005376,NM_001136493,NM_032793	chr1,chr1,chr1	-,+,+	MYCL1,MFSD2A,MFSD2A	-52654,344,344
chr5:119797894-119799382	chr5	+	119798240	119799434	True	NM_173666,NM_016644	chr5,chr5	-,+	DTWD2,PRR16	-1474000,584
chr2:102089817-102090389	chr2	+	102089915	102090310	True	NM_017546,NM_001145664	chr2,chr2	+,-	C2orf29,RFX8	-220621,910
chr22:35652583-35653427	chr22	+	35652837	35653421	True	NM_001003681,NR_027780,NM_005368	chr22,chr22,chr22	+,+,-	HMGXB4,HMGXB4,MB	23,23,360013
chr9:125029396-125030513	chr9	+	125029881	125030546	True	NR_027126,NM_001173512,NR_027125,NM_033117,NM_138777,NM_199177	chr9,chr9,chr9,chr9,chr9,chr9	-,+,-,-,+,+	RBM18,MRRF,RBM18,RBM18,MRRF,MRRF	-2738,-3065,-2738,-2738,-3065,2596
chr21:40175951-40176558	chr21	+	40175986	40176558	True	NR_027065,NM_005239	chr21,chr21	-,+	NCRNA00114,ETS2	-30585,1290
chr8:38389400-38390768	chr8	+	38389586	38390442	True	NM_207412,NM_001199660	chr8,chr8	-,+	C8orf86,LETM2	-3406,-144988
chr6:39926580-39927033	chr6	+	39926626	39927012	True	NR_033233,NM_015345	chr6,chr6	-,+	MOCS1,DAAM2	-24336,-165909
chr2:192701668-192702314	chr2	+	192701717	192702241	True	NM_004657,NM_001031716	chr2,chr2	-,+	SDPR,OBFC2A	9815,-158907
chr17:8080204-8080463	chr17	+	8080272	8080496	True	NM_032354,NM_183065,NR_037447	chr17,chr17,chr17	-,-,+	TMEM107,TMEM107,MIR3676	-558,-558,9996
chr14:98638533-98638772	chr14	+	98638560	98638730	True	NR_015430,NM_182560	chr14,chr14	-,+	C14orf64,C14orf177	-194099,539219
chr5:154094662-154094915	chr5	+	154094743	154094803	True	NM_015315,NR_036094	chr5,chr5	+,-	LARP1,MIR3141	-2333,-119111
chr5:166715078-166715778	chr5	+	166715125	166715801	True	NM_001122679,NR_029520	chr5,chr5	+,-	ODZ2,MIR103-1	-3333,1272227
chr7:73443288-73443765	chr7	+	73443329	73443591	True	NM_001081754,NM_000501,NM_001081752,NM_001081753,NM_152559,NM_001081755	chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,-,+	ELN,ELN,ELN,ELN,WBSCR27,ELN	-954,-954,-954,-954,-186474,-954
chrX:133369485-133370100	chrX	+	133369507	133369790	True	NM_001101357,NR_029523	chrX,chrX	+,-	CCDC160,MIR106A	1286,-65199
chr2:23658904-23659957	chr2	+	23658919	23659933	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	490051,-50674
chr2:48009078-48009345	chr2	+	48009109	48009196	True	NM_025133,NM_000179	chr2,chr2	-,+	FBXO11,MSH6	106717,1024
chr3:11036255-11036559	chr3	+	11036328	11036528	True	NM_003042,NR_027102	chr3,chr3	+,-	SLC6A1,LOC285370	-1959,-230451
chr6:31868416-31868722	chr6_qbl_hap6	+	3162208	3162462	False	NM_025256,NM_001178063,NM_181842,NM_006709	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	-,+,-,-	EHMT2,C2,ZBTB12,EHMT2	-2953,105,1151,-2953
chr6:31868416-31868722	chr6_mcf_hap5	+	3248299	3248553	False	NM_025256,NM_001178063,NM_181842,NM_006709	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	-,+,-,-	EHMT2,C2,ZBTB12,EHMT2	-2955,105,1149,-2955
chr6:31868416-31868722	chr6_cox_hap2	+	3378170	3378424	False	NM_025256,NM_001178063,NM_181842,NM_006709	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	-,+,-,-	EHMT2,C2,ZBTB12,EHMT2	-2952,105,1149,-2952
chr6:31868416-31868722	chr6	+	31868416	31868670	True	NM_025256,NM_001178063,NM_181842,NM_006709	chr6,chr6,chr6,chr6	-,+,-,-	EHMT2,C2,ZBTB12,EHMT2	-2952,105,1149,-2952
chr6:31868416-31868722	chr6_dbb_hap3	+	3153998	3154252	False	NM_025256,NM_001178063,NM_181842,NM_006709	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	-,+,-,-	EHMT2,C2,ZBTB12,EHMT2	-2952,105,1149,-2952
chrX:40504512-40504834	chrX	+	40504583	40504858	True	NM_144970,NM_001195522	chrX,chrX	-,+	CXorf38,LOC347411	2011,-21816
chr22:50745272-50745576	chr22	+	50745426	50745500	True	NM_012401,NM_014678	chr22,chr22	-,+	PLXNB2,PPP6R2	552,36259
chr21:46132923-46133128	chr21	+	46132967	46133063	True	NM_198699,NM_144991	chr21,chr21	+,-	KRTAP10-12,TSPEAR	-15943,-1472
chr1:35223289-35224404	chr1	+	35223322	35224412	True	NM_001164824,NM_153212,NM_005268	chr1,chr1,chr1	-,+,+	C1orf212,GJB4,GJB5	100284,929,-2652
chr19:18393435-18394087	chr19	+	18393448	18393946	True	NM_001145304,NM_005354,NR_036155,NM_001145305,NM_025249	chr19,chr19,chr19,chr19,chr19	-,-,+,-,-	KIAA1683,JUND,MIR3188,KIAA1683,KIAA1683	-8129,-1016,-620,-8129,-8129
chr8:52812713-52813893	chr8	+	52812897	52813722	True	NM_052937,NM_005285	chr8,chr8	-,+	PCMTD1,NPBWR1	-1162,1038745
chr5:70319760-70320219	chr5	+	70319854	70320184	True	NM_004536,NM_022892,NM_022877	chr5,chr5,chr5	-,-,+	NAIP,NAIP,SMN2	807,807,-99137
chr5:70319760-70320219	chr5	-	68899343	68899673	False	NR_027439,NM_001042490	chr5,chr5	-,+	LOC100272216,GTF2H2D	29405,-43320
chr5:70319760-70320219	chr5	-	69754487	69754817	False	NR_033417,NR_033968	chr5,chr5	+,-	GTF2H2B,LOC100049076	-43341,96383
chr2:74758140-74758991	chr2	+	74758198	74758816	True	NM_133637,NM_181575,NM_145074,NM_013247	chr2,chr2,chr2,chr2	-,-,+,+	DQX1,AUP1,HTRA2,HTRA2	-4790,-1224,-1724,-1724
chr19:15557570-15558983	chr19	+	15557699	15558815	True	NR_031716,NM_021241	chr19,chr19	+,-	MIR1470,WIZ	1543,1997
chr1:94145994-94146661	chr1	+	94146201	94146695	True	NR_034091,NM_003567	chr1,chr1	+,-	LOC100129046,BCAR3	-88727,740
chr7:96644780-96645493	chr7	+	96644807	96645523	True	NM_005221,NM_005222,NR_015448	chr7,chr7,chr7	-,+,-	DLX5,DLX6,DLX6-AS1	8670,-9569,-1430
chr10:72642486-72643676	chr10	+	72642831	72643385	True	NM_000281,NM_003901	chr10,chr10	-,+	PCBD1,SGPL1	5206,-67178
chr14:96504871-96505299	chr14	+	96504984	96505320	True	NM_018036,NR_023938,NM_021966	chr14,chr14,chr14	-,+,-	ATG2B,C14orf132,TCL1A	324408,341,-324451
chrX:48858568-48859048	chrX	+	48858780	48858976	True	NM_001163322,NM_207672,NM_020137	chrX,chrX,chrX	+,-,-	CCDC120,GRIPAP1,GRIPAP1	57539,-105,-105
chr10:89084824-89085381	chr10	+	89084823	89085243	True	NR_024397,NR_029408	chr10,chr10	-,+	LOC728190,LOC439994	17126,16924
chr10:89084824-89085381	chr10	-	81432033	81432091	False	NR_027512,NM_001098668	chr10,chr10	+,-	LOC650623,SFTPA2	10639,-111870
chr17:80022964-80023272	chr17	+	80022993	80023063	True	NM_212492,NM_022156	chr17,chr17	+,-	GPS1,DUS1L	-13281,667
chr1:28998223-28998823	chr1	+	28998282	28998349	True	NM_024482,NM_005644,NM_006582	chr1,chr1,chr1	+,-,+	GMEB1,TAF12,GMEB1	-3096,-28678,-3096
chr3:42545705-42546231	chr3	+	42545776	42545934	True	NM_004624,NM_001201584	chr3,chr3	+,-	VIPR1,SEC22C	-1723,77636
chr6:71275861-71276470	chr6	+	71275916	71276488	True	NM_145267,NM_001851	chr6,chr6	+,-	C6orf57,COL9A1	136,-263130
chr20:45340850-45341080	chr20	+	45340859	45341051	True	NM_030777,NM_033550	chr20,chr20	+,-	SLC2A10,TP53RK	-2632,-22583
chr1:94134027-94134562	chr1	+	94134026	94134228	True	NR_034091,NM_003567	chr1,chr1	+,-	LOC100129046,BCAR3	-76552,13217
chr3:98243350-98244149	chr3	+	98243449	98244126	True	NM_001040199,NM_005290,NM_001040182,NM_001040183,NM_001040181,NM_019895,NM_001040200	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-,-	CLDND1,GPR15,CLDND1,CLDND1,CLDND1,CLDND1,CLDND1	-1539,6751,-1539,-1539,-1539,-1539,-1539
chr3:16312664-16313004	chr3	+	16312664	16313052	True	NM_206831,NM_001047434,NM_138381	chr3,chr3,chr3	-,-,+	DPH3,DPH3,OXNAD1	-6168,-6168,-6048
chr4:21951031-21951261	chr4	+	21951072	21951306	True	NM_001128432,NM_147182	chr4,chr4	+,-	GBA3,KCNIP4	743241,-698
chr22:38305150-38306472	chr22	+	38305735	38306487	True	NM_032561,NM_033386	chr22,chr22	-,+	C22orf23,MICALL1	43166,-3440
chr1:15273615-15273851	chr1	+	15273620	15273829	True	NM_001017999,NR_027136	chr1,chr1	+,-	KAZN,C1orf126	-1256,205181
chr11:35522906-35523845	chr11	+	35522970	35523635	True	NM_014344,NM_001001991	chr11,chr11	+,-	FJX1,PAMR1	116099,23591
chr19:9609020-9609506	chr19	+	9609120	9609390	True	NM_152476,NM_001172651	chr19,chr19	-,+	ZNF560,ZNF177	39,-122179
chr4:103669694-103669952	chr4	+	103669693	103669798	True	NM_001008388,NM_005908	chr4,chr4	+,-	CISD2,MANBA	120336,12410
chr16:2274880-2275565	chr16	+	2274879	2275353	True	NM_004424,NM_001042371	chr16,chr16	+,-	E4F1,PGP	-1365,-10057
chr13:90880752-90881123	chr13	+	90880751	90880830	True	NR_030754,NR_027039	chr13,chr13	+,-	MIR622,LOC144776	2605,698086
chr22:41252352-41252582	chr22	+	41252406	41252470	True	NM_003932,NM_001204827,NM_022098,NM_145174	chr22,chr22,chr22,chr22	-,+,+,-	ST13,XPNPEP3,XPNPEP3,DNAJB7	267,614,614,5710
chr16:31177878-31178896	chr16	+	31178608	31178763	True	NM_173502,NM_001170634	chr16,chr16	-,+	PRSS36,FUS	-17193,12667
chr16:22825910-22826157	chr16	+	22825985	22826071	True	NR_037517,NM_006043	chr16,chr16	-,+	MIR548AA2,HS3ST2	-22622,-176
chr16:58032393-58032747	chr16	+	58032417	58032751	True	NM_001195302,NM_001204911,NM_020807,NM_024598	chr16,chr16,chr16,chr16	+,+,-,+	C16orf57,C16orf57,ZNF319,C16orf57	2525,2525,1061,2525
chr18:77712893-77713207	chr18	+	77713060	77713238	True	NM_001136180,NM_001146343,NM_001146345,NM_025078	chr18,chr18,chr18,chr18	+,-,-,-	HSBP1L1,PQLC1,PQLC1,PQLC1	11343,-1407,-1407,-1407
chr1:59251164-59251380	chr1	+	59251272	59251356	True	NM_002228,NR_034014,NR_034015	chr1,chr1,chr1	-,+,+	JUN,LOC100131060,LOC100131060	-1487,-500,-500
chr18:54306193-54306965	chr18	+	54306210	54306771	True	NM_015285,NM_004786,NR_024546	chr18,chr18,chr18	+,-,-	WDR7,TXNL1,TXNL1	11844,-290,-290
chr2:11467044-11467982	chr2	+	11467144	11467642	True	NM_152391,NM_004850	chr2,chr2	+,-	PQLC3,ROCK2	-171665,17121
chr1:100815497-100816575	chr1	+	100816040	100816416	True	NM_033313,NM_033312,NM_001918,NM_003672	chr1,chr1,chr1,chr1	+,+,-,+	CDC14A,CDC14A,DBT,CDC14A	1606,1606,-100631,1606
chr19:9726383-9726999	chr19	+	9726597	9726951	True	NM_001048241,NM_152289	chr19,chr19	+,-	UBL5,ZNF561	211616,5029
chr11:82442944-82443496	chr11	+	82442969	82443498	True	NM_145018,NM_175885	chr11,chr11	+,-	C11orf82,FAM181B	169238,1458
chr1:90099289-90099623	chr1	+	90099317	90099613	True	NR_033981,NM_032270	chr1,chr1	-,+	FLJ27354,LRRC8C	-864,-724
chr3:27411627-27412317	chr3	+	27411680	27412057	True	NM_052953,NM_199347	chr3,chr3	+,-	LRRC3B,NEK10	-747431,-768
chr6:32526340-32527701	chr6	+	32526357	32527697	True	NR_001298,NM_002122	chr6,chr6	-,+	HLA-DRB6,HLA-DQA1	132,77485
chr6:15027145-15027834	chr6	+	15027156	15027872	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	218654,635467
chr1:8485592-8486234	chr1	+	8485694	8486219	True	NM_001042682,NM_001080397	chr1,chr1	-,+	RERE,SLC45A1	-1947,-101355
chr10:51603182-51604253	chr10	+	51603281	51604056	True	NM_001145262,NM_006327	chr10,chr10	+,-	NCOA4,TIMM23	-27055,19336
chr10:51603182-51604253	chr10	-	51390694	51391469	False	NM_003631,NM_002443	chr10,chr10	-,+	PARG,MSMB	-19363,158083
chr17:15372730-15373786	chr17	+	15372910	15373783	True	NM_001204477,NM_001130842	chr17,chr17	-,+	CDRT4,ZNF286A	-1985,229107
chr4:108921899-108923356	chr4	+	108922031	108923405	True	NM_005327,NM_001166119	chr4,chr4	+,-	HADH,LEF1	-11225,164598
chr3:49910099-49910585	chr3	+	49910152	49910494	True	NM_001167582,NM_024046	chr3,chr3	+,-	RBM6,CAMKV	66982,-2783
chr9:136037358-136037787	chr9	+	136037392	136037768	True	NM_021996,NR_001275	chr9,chr9	-,+	GBGT1,CELP	1583,-79517
chr18:904732-905090	chr18	+	904817	905133	True	NM_001117,NM_001099733,NM_005433	chr18,chr18,chr18	+,+,-	ADCYAP1,ADCYAP1,YES1	163,52,-92490
chr17:60001899-60002680	chr17	+	60002251	60002666	True	NR_026641,NM_020748,NM_001144933	chr17,chr17,chr17	-,-,+	INTS2,INTS2,EFCAB3	2762,2762,444912
chr6:150174734-150176722	chr6	+	150175609	150176745	True	NM_025217,NM_032832	chr6,chr6	+,-	ULBP2,LRP11	86390,8785
chr7:100860110-100860378	chr7	+	100860112	100860390	True	NM_001084,NM_006349	chr7,chr7	-,+	PLOD3,ZNHIT1	671,594
chr18:59153228-59154832	chr18	+	59153441	59154670	True	NM_031891,NM_173557	chr18,chr18	+,-	CDH20,RNF152	3104,405689
chr9:46279786-46280245	chr4	-	3537627	3537677	True	NM_002337,NM_173660	chr4,chr4	-,+	LRPAP1,DOK7	-3403,-72645
chr9:46279786-46280245	chr9	+	46279919	46280093	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2649189,407472
chr9:46279786-46280245	chr9	+	67688528	67689065	False	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	105661,237695
chr9:124503672-124504230	chr9	+	124503763	124504257	True	NR_003191,NM_138709	chr9,chr9	-,+	GGTA1,DAB2IP	-241457,806
chr4:85506866-85507774	chr4	+	85506869	85507201	True	NM_001263,NM_006168	chr4,chr4	+,-	CDS1,NKX6-1	-2863,-87482
chr11:65264488-65265010	chr11	+	65264536	65264862	True	NR_002819,NM_001130144	chr11,chr11	+,-	MALAT1,LTBP3	370,60887
chr12:9066259-9066862	chr12	+	9066335	9066891	True	NM_004426,NM_002355	chr12,chr12	+,-	PHC1,M6PR	424,35411
chr14:22037414-22038164	chr14	+	22037598	22038162	True	NM_014828,NM_001005465	chr14,chr14	+,-	TOX4,OR10G3	-92321,763
chr11:134119819-134120364	chr11	+	134119845	134120385	True	NM_001037304,NM_001037305,NM_199297,NM_014384,NM_014174,NM_199298	chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,+,-,-	THYN1,THYN1,THYN1,ACAD8,THYN1,THYN1	2925,2925,2925,3048,2925,2925
chr9:139836948-139837158	chr9	+	139837002	139837148	True	NM_000606,NM_018998,NM_178536	chr9,chr9,chr9	+,-,+	C8G,FBXW5,LCN12	2549,2075,9619
chr1:244594343-244596056	chr1	+	244594596	244595522	True	NM_001126,NM_001130957	chr1,chr1	-,+	ADSS,C1orf101	19970,29150
chr9:128003614-128003955	chr9	+	128003793	128003963	True	NM_005347,NM_015635	chr9,chr9	-,+	HSPA5,GAPVD1	-127,20147
chr12:58146174-58146468	chr12	+	58146272	58146508	True	NM_005981,NM_138396,NM_000075	chr12,chr12,chr12	+,+,-	TSPAN31,MARCH9,CDK4	-7539,2391,-108
chr9:139245960-139246410	chr9	+	139245976	139246352	True	NM_001200003,NM_001145639,NM_001080849	chr9,chr9,chr9	+,+,-	GPSM1,GPSM1,DNLZ	2899,1156,11939
chr5:134735438-134735699	chr5	+	134735493	134735689	True	NM_138609,NM_138610,NM_004893,NM_001040158,NM_178019	chr5,chr5,chr5,chr5,chr5	-,-,-,-,+	H2AFY,H2AFY,H2AFY,H2AFY,CATSPER3	-565,-565,48,-565,-431948
chr10:43573021-43573409	chr10	+	43573172	43573370	True	NM_020975,NM_020630,NM_145313	chr10,chr10,chr10	+,+,-	RET,RET,RASGEF1A	-706,-706,189047
chr7:99439313-99441179	chr7	+	99439440	99440854	True	NM_001005276,NM_057096	chr7,chr7	-,+	OR2AE1,CYP3A43	33852,-13861
chr9:3896880-3898707	chr9	+	3897061	3898463	True	NR_026663,NM_152629	chr9,chr9	+,-	C9orf70,GLIS3	182,253770
chr5:38264192-38265476	chr5	+	38264394	38265306	True	NM_152403,NM_001127671	chr5,chr5	+,-	EGFLAM,LIFR	-5912,291492
chr17:12622463-12623038	chr17	+	12622559	12622856	True	NM_001146313,NM_001165962	chr17,chr17	+,-	MYOCD,ELAC2	749,298586
chr5:180236386-180236650	chr5	+	180236430	180236651	True	NM_001114617,NM_001114618,NM_001114619,NR_027183,NM_002406,NM_001114620	chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,+,-,-	MGAT1,MGAT1,MGAT1,LOC729678,MGAT1,MGAT1	537,217,-5528,20307,-6382,-5528
chr1:111772611-111773409	chr1	+	111772652	111773422	True	NM_001025199,NM_004000,NM_024901,NM_001025197	chr1,chr1,chr1,chr1	+,+,-,+	CHI3L2,CHI3L2,DENND2D,CHI3L2	-377,-2429,-29371,-2429
chr11:8960093-8960877	chr11	+	8960113	8960735	True	NM_020643,NM_020646,NM_182901	chr11,chr11,chr11	-,-,+	C11orf16,ASCL3,C11orf17	-5560,3904,-27377
chr9:136084326-136084742	chr9	+	136084466	136084672	True	NM_014581,NR_001275	chr9,chr9	-,+	OBP2B,CELP	6,-126591
chr9:136084326-136084742	chr9	-	138437940	138438062	False	NM_014582,NM_144654	chr9,chr9	+,-	OBP2A,C9orf116	-6,-46179
chr16:30137055-30137298	chr16	+	30137109	30137179	True	NM_002746,NM_001109891,NR_027081,NM_001040056	chr16,chr16,chr16,chr16	-,-,+,-	MAPK3,MAPK3,LOC100271831,MAPK3	-2479,-2479,-11727,-2479
chr19:59031510-59032143	chr19	+	59031515	59032087	True	NM_012254,NM_032792,NM_005762	chr19,chr19,chr19	-,-,+	SLC27A5,ZBTB45,TRIM28	-8083,-594,23748
chr5:122750588-122751149	chr5	+	122750793	122751187	True	NM_001031812,NM_153223,NM_001166226	chr5,chr5,chr5	+,-,-	CSNK1G3,CEP120,CEP120	96605,8151,8151
chr12:45595145-45596263	chr12	+	45595148	45595960	True	NM_001025356,NR_001571,NR_037144	chr12,chr12,chr12	+,-,-	ANO6,RNY5,PLEKHA8P1	13809,-13896,13879
chr2:106366341-106366604	chr2	+	106366585	106366653	True	NM_003581,NM_001004722,NM_201557	chr2,chr2,chr2	+,+,-	NCK2,NCK2,FHL2	-5116,-5116,-311355
chr1:151513163-151513504	chr1	+	151513254	151513500	True	NM_001126337,NM_145796,NM_020127,NR_030280	chr1,chr1,chr1,chr1	+,-,+,+	TUFT1,POGZ,TUFT1,MIR554	-524,-81313,-524,4771
chr3:190231029-190231364	chr3	+	190231031	190231407	True	NM_001167928,NM_001167929,NM_001167931,NM_001167930,NM_134470,NM_207316,NM_002182	chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,+,-,+	IL1RAP,IL1RAP,IL1RAP,IL1RAP,IL1RAP,TMEM207,IL1RAP	432,432,432,432,432,-63366,432
chr12:31800685-31801426	chr12	+	31800880	31801165	True	NM_001135864,NM_144973	chr12,chr12	+,-	METTL20,DENND5B	-849,-56928
chr3:122049798-122050529	chr3	+	122049900	122050540	True	NM_005213,NM_001017928	chr3,chr3	+,-	CSTA,CCDC58	-5948,51584
chr17:19091119-19091443	chr17	+	19091279	19091355	True	NM_006613,NM_001102664	chr17,chr17	-,+	GRAP,EPN2	-140943,49334
chr17:19091119-19091443	chr17	-	19093531	19093607	False	NM_006613,NM_001102664	chr17,chr17	-,+	GRAP,EPN2	-143195,47082
chr1:48444450-48445865	chr1	+	48444497	48445880	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	16745,242476
chr5:141256005-141256480	chr5	+	141256202	141256466	True	NM_001142603,NM_032420,NM_002587	chr5,chr5,chr5	+,-,-	KIAA0141,PCDH1,PCDH1	46918,1528,1528
chr6:41121712-41122279	chr6	+	41121725	41122261	True	NM_018965,NR_026938,NM_178174	chr6,chr6,chr6	-,+,-	TREM2,LOC221442,TREML1	8711,-53003,1
chr12:110564598-110564855	chr12	+	110564617	110564894	True	NM_207435,NM_031473,NM_001143779,NM_014055	chr12,chr12,chr12,chr12	-,+,+,+	C12orf76,IFT81,IFT81,IFT81	-59117,-2528,-2528,-2528
chr22:50925570-50925881	chr22	+	50925574	50925914	True	NM_024866,NM_017584,NM_002972	chr22,chr22,chr22	+,+,-	ADM2,MIOX,SBF1	-5613,-412,-12110
chr19:23573040-23574917	chr19	+	23573460	23574929	True	NR_003662,NM_003430	chr19,chr19	+,-	RPSAP58,ZNF91	370886,3399
chr20:37375745-37376662	chr20	+	37375931	37376619	True	NR_027241,NM_024855	chr20,chr20	-,+	LOC388796,ACTR5	-311913,477
chr5:39525812-39526820	chr5	+	39526054	39526843	True	NM_001343,NM_003999	chr5,chr5	-,+	DAB2,OSMR	-100719,-680005
chr20:25991699-25992420	chr20	+	25991700	25991917	True	NR_004846,NR_003678	chr20,chr20	+,-	LOC100134868,C20orf191	-1316,102817
chr20:25991699-25992420	chr20	-	25825264	25825481	False	NR_004846,NR_026714	chr20,chr20	+,-	LOC100134868,FAM182B	164953,-43337
chr10:50815289-50815501	chr10	+	50815328	50815540	True	NM_000124,NM_020984,NM_001142934,NM_001142933,NM_001142929,NM_020549,NM_003055,NM_020985,NM_020986	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,+,+,+,+,+,+,+,+	ERCC6,CHAT,CHAT,CHAT,CHAT,CHAT,SLC18A3,CHAT,CHAT	-68181,1600,6542,6542,6542,6542,2806,5613,5613
chr2:69662375-69663169	chr2	+	69662383	69663226	True	NM_001002755,NM_001153,NM_001002757,NM_001002756,NM_015700	chr2,chr2,chr2,chr2,chr2	-,+,-,-,-	NFU1,ANXA4,NFU1,NFU1,NFU1	1588,305900,1588,1588,1588
chr2:74012215-74013027	chr2	+	74012255	74012914	True	NM_001080474,NM_003584	chr2,chr2	+,-	C2orf78,DUSP11	-990,-4971
chr2:74012215-74013027	chr2	+	74031851	74032151	False	NM_001080474,NM_003584	chr2,chr2	+,-	C2orf78,DUSP11	-20586,-24567
chr2:74012215-74013027	chr2	+	74026951	74027251	False	NM_001080474,NM_003584	chr2,chr2	+,-	C2orf78,DUSP11	-15686,-19667
chr2:74012215-74013027	chr2	+	74017156	74017456	False	NM_001080474,NM_003584	chr2,chr2	+,-	C2orf78,DUSP11	-5891,-9872
chr2:74012215-74013027	chr2	+	74022053	74022353	False	NM_001080474,NM_003584	chr2,chr2	+,-	C2orf78,DUSP11	-10788,-14769
chr17:75471881-75472103	chr17	+	75471930	75472044	True	NM_001113495,NR_036200	chr17,chr17	+,-	SEPT9,MIR4316	-656,-78794
chr8:22458719-22459097	chr8	+	22458738	22458944	True	NM_001013842,NM_173686,NR_027715,NM_021174,NR_033902,NM_001198827	chr8,chr8,chr8,chr8,chr8,chr8	+,+,-,+,+,+	C8orf58,C8orf58,FLJ14107,KIAA1967,KIAA1967,C8orf58	-1675,-1675,40828,3594,3200,-1675
chr6:91248502-91249354	chr6	+	91248623	91249369	True	NM_145331,NM_032602	chr6,chr6	-,+	MAP3K7,GJA10	47447,-644495
chr12:104610788-104612095	chr12	+	104610802	104611696	True	NM_006166,NM_001093771	chr12,chr12	-,+	NFYB,TXNRD1	-78762,-1294
chr1:155251250-155252885	chr1	+	155251768	155252566	True	NM_003993,NM_020897	chr1,chr1	-,+	CLK2,HCN3	-8487,-4452
chr4:1007805-1008290	chr4	+	1007816	1008215	True	NM_001004358,NM_001004356,NM_021923,NM_213613	chr4,chr4,chr4,chr4	+,+,+,-	FGFRL1,FGFRL1,FGFRL1,SLC26A1	-2107,-2257,-1615,-20592
chr10:81835967-81837046	chr10	+	81836268	81836796	True	NR_027430,NR_027431,NR_027432,NR_027429,NR_027428,NM_025125	chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,-,+	LOC219347,LOC219347,LOC219347,LOC219347,LOC219347,C10orf57	2203,2203,2203,2203,2203,1629
chr16:29938681-29939274	chr16	+	29938705	29939023	True	NM_178863,NM_181718	chr16,chr16	-,+	KCTD13,ASPHD1	-1160,-26610
chr1:180476170-180477703	chr1	+	180476296	180477386	True	NM_001135669,NM_032360	chr1,chr1	+,-	XPR1,ACBD6	123759,-4274
chr19:1382091-1382776	chr19	+	1382253	1382671	True	NM_000156,NM_024407	chr19,chr19	-,+	GAMT,NDUFS7	18937,1211
chr14:98446544-98447343	chr14	+	98446576	98447359	True	NR_015430,NM_182560	chr14,chr14	-,+	C14orf64,C14orf177	-2115,730590
chr9:35547245-35548112	chr9	+	35547340	35548098	True	NM_001099951,NM_001135999	chr9,chr9	-,+	FAM166B,RUSC2	15848,-8762
chr7:98868544-98869054	chr7	+	98868610	98868854	True	NM_001145715,NR_002147	chr7,chr7	-,+	KPNA7,MYH16	-63521,2069
chr7:99701363-99701860	chr7	+	99701594	99701805	True	NM_004722,NM_182776,NM_005916,NR_029831	chr7,chr7,chr7,chr7	+,-,-,-	AP4M1,MCM7,MCM7,MIR106B	-2515,-3214,-2167,-9897
chr3:52487818-52488068	chr3	+	52487834	52488054	True	NM_003280,NM_020163,NM_007184	chr3,chr3,chr3	-,-,+	TNNC1,SEMA3G,NISCH	53,-8791,1469
chr9:67793462-67793911	chr9	+	67793486	67793838	True	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	401,132922
chr9:67793462-67793911	chr9	-	44990884	44990934	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-699,-1360154
chr9:67793462-67793911	chr9	-	45727675	45727725	False	NM_001145196,NR_024060	chr9,chr9	-,+	FAM75A6,FAM27A	-2096945,-697
chr8:11143620-11143894	chr8	+	11143765	11143895	True	NM_173683,NM_015458	chr8,chr8	-,+	XKR6,MTMR9	-84890,-1826
chr21:44807801-44808224	chr21	+	44807867	44808208	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	61695,38845
chr16:67978881-67979291	chr16	+	67978968	67979304	True	NM_006742,NM_002801,NM_000229	chr16,chr16,chr16	+,-,-	PSKH1,PSMB10,LCAT	-51844,-8188,-953
chr1:55265424-55266187	chr1	+	55265542	55266044	True	NM_152607,NM_001114108,NM_001110533,NM_017904	chr1,chr1,chr1,chr1	+,-,+,-	C1orf177,TTC22,C1orf177,TTC22	5691,947,5691,947
chr16:32942155-32942573	chr17	+	36639398	36639640	True	NM_025248,NM_001199417	chr17,chr17	-,+	SRCIN1,ARHGAP23	122785,-54921
chr16:32942155-32942573	chr16	+	32942162	32942582	False	NR_003083,NM_016212	chr16,chr16	-,+	SLC6A10P,TP53TG3	-45699,262397
chr16:32942155-32942573	chr16	-	33725031	33725081	False	NR_033866,NM_001205265	chr16,chr16	-,+	LOC390705,TP53TG3B	-426329,-462962
chr3:126197409-126198798	chr3	+	126197440	126198388	True	NM_001040653,NM_025112,NM_152889	chr3,chr3,chr3	-,-,+	ZXDC,ZXDC,CHST13	-2678,-2678,44787
chr5:131594603-131595456	chr5	+	131594764	131595182	True	NM_001131027,NM_001142599,NM_003687	chr5,chr5,chr5	+,-,+	PDLIM4,P4HA2,PDLIM4	-1464,-31208,-1464
chr15:21361176-21363035	chr22	+	22653725	22653775	True	NM_080764,NR_027293	chr22,chr22	-,+	ZNF280B,LOC96610	209780,-1313
chr15:21361176-21363035	chr15	+	21361479	21363002	False	NR_027411,NR_028506	chr15,chr15	+,-	GOLGA8C,NF1P1	-593856,-226854
chr11:46866283-46867306	chr11	+	46866604	46867288	True	NM_014756,NM_001003676,NM_001008938	chr11,chr11,chr11	-,+,-	CKAP5,C11orf49,CKAP5	605,90962,605
chr1:245136040-245136889	chr1	+	245136240	245136935	True	NR_026587,NR_026586,NR_026588,NM_001143943,NM_032328,NM_031844	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-	EFCAB2,EFCAB2,EFCAB2,EFCAB2,EFCAB2,HNRNPU	-2665,-3012,-2665,-2665,-3125,-108413
chr19:15559154-15560044	chr19	+	15559303	15560003	True	NR_031716,NM_021241	chr19,chr19	+,-	MIR1470,WIZ	355,809
chr8:104851215-104852158	chr8	+	104851393	104852204	True	NM_014677,NM_030780	chr8,chr8	+,-	RIMS2,SLC25A32	-20035,-423925
chr9:6414052-6414299	chr9	+	6414056	6414298	True	NM_000170,NM_152896	chr9,chr9	-,+	GLDC,UHRF2	231444,-956
chr4:15708449-15709861	chr4	+	15708452	15709900	True	NM_004334,NR_036464	chr4,chr4	+,-	BST1,FBXL5	-3930,-51417
chr5:178053796-178054237	chr5	+	178053932	178054116	True	NM_020666,NM_058230	chr5,chr5	-,+	CLK4,ZNF354B	-12,232837
chr7:44104045-44104492	chr7	+	44104098	44104506	True	NM_000290,NM_014063	chr7,chr7	-,+	PGAM2,DBNL	730,-19910
chr22:20067528-20067773	chr22	+	20067569	20067815	True	NR_037412,NM_001190326,NM_022727,NM_022720,NR_031706	chr22,chr22,chr22,chr22,chr22	+,+,-,+,+	MIR3618,DGCR8,TRMT2A,DGCR8,MIR1306	5453,51,37003,51,5765
chr10:12082343-12084309	chr10	+	12082486	12083901	True	NM_018706,NM_080599,NM_015542	chr10,chr10,chr10	+,-,-	DHTKD1,UPF2,UPF2	27032,1172,957
chr20:46612161-46613522	chr20	+	46612280	46613552	True	NR_026958,NM_198596	chr20,chr20	+,-	LOC284749,SULF2	375101,-196920
chr1:67217789-67218002	chr1	+	67217794	67217972	True	NM_005478,NM_152665	chr1,chr1	-,+	INSL5,TCTEX1D1	49020,167
chr1:14718931-14719541	chr1	+	14719172	14719584	True	NM_015209,NR_027136	chr1,chr1	+,-	KAZN,C1orf126	205628,759426
chr6:169653570-169653860	chr6	+	169653623	169653877	True	NM_001029863,NM_003247	chr6,chr6	+,-	C6orf120,THBS2	448379,310
chr3:133523088-133523903	chr3	+	133523125	133523941	True	NM_016577,NM_021203	chr3,chr3	-,+	RAB6B,SRPRB	90800,-20299
chr10:27706920-27707291	chr10	+	27707053	27707208	True	NM_021252,NM_001034842	chr10,chr10	+,-	RAB18,PTCHD3	86040,-3756
chr19:54329557-54330956	chr19	+	54329834	54330934	True	NM_001020820,NM_144687,NR_029866	chr19,chr19,chr19	+,-,+	MYADM,NLRP12,MIR373	38676,-2186,-37926
chr17:29717311-29717549	chr17	+	29717368	29717548	True	NM_014210,NM_032932	chr17,chr17	-,+	EVI2A,RAB11FIP4	-68601,1093
chr7:6052279-6052523	chr7	+	6052470	6052566	True	NM_006303,NR_003085,NM_000535	chr7,chr7,chr7	+,-,-	AIMP2,PMS2,PMS2	-3641,-3733,-3733
chr19:50706701-50706925	chr19	+	50706701	50706795	True	NM_024729,NM_001145809,NM_001077186,NM_152358	chr19,chr19,chr19,chr19	+,+,+,-	MYH14,MYH14,MYH14,IZUMO2	89,89,89,-40163
chr7:108162660-108163854	chr7	+	108162831	108163880	True	NM_015723,NM_012328	chr7,chr7	-,+	PNPLA8,DNAJB9	2811,46308
chr2:128460491-128462032	chr2	+	128460492	128462051	True	NM_032740,NM_001161404	chr2,chr2	+,-	SFT2D3,LIMS2	-1949,-21132
chr19:4641045-4641259	chr19	+	4641222	4641290	True	NM_001167942,NM_152362,NM_019107	chr19,chr19,chr19	+,+,-	TNFAIP8L1,TNFAIP8L1,C19orf10	-1244,-1746,29175
chr19:9291655-9293286	chr19	+	9291805	9293119	True	NM_175883,NM_001005191	chr19,chr19	+,-	OR7D2,OR7D4	3150,32478
chr11:118974261-118974625	chr11	+	118974421	118974659	True	NM_014807,NM_001382,NM_002105	chr11,chr11,chr11	+,-,-	C2CD2L,DPAGT1,H2AFX	3433,-1636,-8244
chr1:157095724-157097496	chr1	+	157095785	157097284	True	NM_005240,NR_001560	chr1,chr1	-,+	ETV3,CYCSP52	10943,869
chr16:11370606-11371217	chr16	+	11370609	11371265	True	NM_005425,NM_021247,NM_152308,NM_002761,NM_002762	chr16,chr16,chr16,chr16,chr16	-,-,+,-,-	TNP2,PRM3,C16orf75,PRM1,PRM2	-7449,-3157,68045,3977,-272
chr9:114537571-114539212	chr9	+	114537805	114539130	True	NM_173521,NM_001198664	chr9,chr9	-,+	C9orf84,GNG10	6699,-114013
chr19:5784380-5784686	chr19	+	5784427	5784735	True	NM_020175,NM_001134316,NM_001161619,NM_004558	chr19,chr19,chr19,chr19	-,-,-,+	DUS3L,PRR22,DUS3L,NRTN	6564,91,6564,39082
chr3:113558162-113558904	chr3	+	113558161	113558700	True	NM_017577,NM_025146	chr3,chr3	+,-	GRAMD1C,NAA50	-539,-93041
chr10:123732471-123733568	chr10	+	123732831	123733602	True	NM_206861,NM_017615,NM_001167865	chr10,chr10,chr10	+,-,-	TACC2,NSMCE4A,NSMCE4A	15086,1196,1196
chr13:111597799-111598139	chr13	+	111597830	111598038	True	NM_017664,NM_001113511	chr13,chr13	-,+	ANKRD10,ARHGEF7	-30414,169585
chr1:156086513-156087014	chr1	+	156086648	156086718	True	NM_001093725,NM_005572,NM_170707,NM_170708	chr1,chr1,chr1,chr1	-,+,+,+	MEX3A,LMNA,LMNA,LMNA	-34859,-2238,-2238,-2238
chr1:220752343-220752766	chr1	+	220752499	220752815	True	NM_012414,NM_018650	chr1,chr1	-,+	RAB3GAP2,MARK1	-306656,-50987
chr9:39285812-39286684	chr9	+	39285855	39286697	True	NM_033655,NM_001085452	chr9,chr9	-,+	CNTNAP3,FAM75A1	1653,69001
chr9:39285812-39286684	chr9	-	65578407	65578889	False	NR_024496,NM_015667	chr9,chr9	+,-	LOC442421,FAM75A7	915379,-68797
chr9:39285812-39286684	chr9	+	39815465	39815947	False	NR_003528,NM_001085452	chr9,chr9	-,+	LOC653501,FAM75A1	-350939,69027
chr9:39285812-39286684	chr9	+	41431471	41431953	False	NM_015667	chr9	+	FAM75A7	68725
chr12:5256910-5258605	chr12	+	5257013	5258599	True	NM_006422,NM_002234	chr12,chr12	-,+	AKAP3,KCNA5	-502670,-103986
chr4:5052377-5052887	chr4	+	5052487	5052859	True	NM_018659,NM_018401	chr4,chr4	-,+	CYTL1,STK32B	-31290,667
chr15:65479286-65480195	chr15	+	65479411	65480067	True	NM_001101362,NM_006660	chr15,chr15	+,-	KBTBD13,CLPX	-110315,-1848
chr19:3364013-3364222	chr19	+	3364042	3364268	True	NM_005597,NM_001136503,NM_205843	chr19,chr19,chr19	+,-,+	NFIC,C19orf77,NFIC	2304,116322,-4478
chr2:16081349-16081658	chr2	+	16081416	16081682	True	NR_026766,NM_005378	chr2,chr2	-,+	MYCNOS,MYCN	213,-784
chr19:38880408-38881106	chr19	+	38880485	38880985	True	NM_001042522,NM_001039616,NM_152657	chr19,chr19,chr19	+,+,-	SPRED3,SPRED3,GGN	21,21,-1817
chr2:103377164-103378496	chr2	+	103377358	103378454	True	NM_144632,NM_032718	chr2,chr2	+,-	TMEM182,MFSD9	35,-24021
chr5:176982158-176983698	chr5	+	176982377	176983470	True	NM_001190946,NM_017510,NR_024019	chr5,chr5,chr5	-,+,-	FAM193B,TMED9,FAM193B	-829,35742,-829
chr4:190905475-190905734	chr18	+	49119	49181	False	NM_005131,NR_033770	chr18,chr18	-,+	THOC1,ROCK1P1	218928,59883
chr4:190905475-190905734	chr4	+	190905589	190905651	True	NM_020040,NM_004477	chr4,chr4	-,+	TUBB4Q,FRG1	423,-43666
chr4:190905475-190905734	chr9	-	141069870	141069932	False	NM_032937,NR_027156	chr9,chr9	-,+	C9orf37,TUBBP5	-556562,-25356
chr18:23809557-23811094	chr18	+	23809781	23810771	True	NM_005640,NM_005637	chr18,chr18	+,-	TAF4B,SS18	-3436,-139170
chr16:15742907-15743274	chr16	+	15743114	15743188	True	NM_001143979,NM_001184998,NM_014647,NR_030159,NM_001184999,NM_017668	chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,+,-,+	NDE1,KIAA0430,KIAA0430,MIR484,KIAA0430,NDE1	-6048,-6091,-6091,-6021,-6091,894
chr5:79336562-79337546	chr5	+	79336643	79337505	True	NM_003248,NM_001167741	chr5,chr5	+,-	THBS4,MTX3	-5524,-49555
chr4:2010402-2010712	chr4	+	2010467	2010689	True	NM_005663,NM_001168243	chr4,chr4	-,+	WHSC2,C4orf48	320,33030
chr12:14970003-14971430	chr12	+	14970039	14971445	True	NM_175874,NM_001013698	chr12,chr12	+,-	C12orf60,C12orf69	-13591,-2923
chr17:76248579-76248933	chr17	+	76248633	76248919	True	NR_002219,NM_001204210	chr17,chr17	-,+	EPR1,TMEM235	-27850,-21293
chr22:50314021-50315184	chr22	+	50314084	50315166	True	NM_024324,NM_024105,NM_001135101	chr22,chr22,chr22	+,-,+	CRELD2,ALG12,CRELD2	-1852,-1978,-1852
chr19:55972900-55973109	chr19	+	55972935	55973123	True	NM_024710,NM_033113,NM_001136202,NM_001136201	chr19,chr19,chr19,chr19	-,+,-,-	ISOC2,ZNF628,ISOC2,ISOC2	4,14575,4,4
chr4:71583690-71584725	chr4	+	71583980	71584774	True	NM_144646,NM_014961,NM_001037442	chr4,chr4,chr4	-,+,+	IGJ,RUFY3,RUFY3	-51632,2921,2921
chr19:45248825-45249900	chr19	+	45248927	45249861	True	NM_005178,NR_027754	chr19,chr19	+,-	BCL3,CEACAM22P	2116,-188777
chr19:39826925-39827531	chr19	+	39827236	39827546	True	NM_018028,NM_004877	chr19,chr19	+,-	SAMD4B,GMFG	5561,-510
chr11:24565416-24565646	chr11	+	24565445	24565682	True	NM_001009909,NM_001195637	chr11,chr11	+,-	LUZP2,LOC100500938	-46953,-1683473
chr11:116698943-116699218	chr11	+	116699150	116699217	True	NM_000039,NM_000482,NM_000040	chr11,chr11,chr11	-,-,+	APOA1,APOA4,APOC3	9172,-5139,1406
chr22:50766078-50766339	chr22	+	50766105	50766211	True	NM_001001794,NM_014678	chr22,chr22	-,+	FAM116B,PPP6R2	-616,15548
chr7:108203904-108205866	chr7	+	108204292	108205775	True	NM_001130475,NM_182529,NM_012328	chr7,chr7,chr7	-,-,+	THAP5,THAP5,DNAJB9	4452,4182,4413
chr9:114667033-114667892	chr9	+	114667352	114667700	True	NM_003358,NM_173521	chr9,chr9	+,-	UGCG,C9orf84	-8197,-121573
chr19:19176106-19176959	chr19	+	19176133	19176437	True	NM_001017392,NM_178526	chr19,chr19	-,+	SUGP2,SLC25A42	-31753,-1381
chr21:27105732-27106642	chr21	+	27105957	27106673	True	NM_001003701,NM_002040,NM_001003703,NM_001003697,NM_001003696,NM_001197297,NM_001685	chr21,chr21,chr21,chr21,chr21,chr21,chr21	-,+,-,-,-,+,-	ATP5J,GABPA,ATP5J,ATP5J,ATP5J,GABPA,ATP5J	1342,655,1342,1342,1342,584,1342
chr6:155634302-155634881	chr6	+	155634590	155634937	True	NM_001001346,NM_016020	chr6,chr6	+,-	CLDN20,TFB1M	-49499,737
chr2:204498399-204498909	chr2	+	204498549	204498914	True	NM_006139,NM_203365	chr2,chr2	+,-	CD28,RAPH1	72283,-98491
chr11:124969345-124969742	chr11	+	124969381	124969515	True	NM_198277,NM_001080546	chr11,chr11	+,-	SLC37A2,TMEM218	-36429,3740
chr5:95000341-95001398	chr5	+	95000351	95000892	True	NM_031952,NM_173362	chr5,chr5	-,+	SPATA9,RFESD	17889,-17827
chr16:75240015-75240369	chr16	+	75240132	75240368	True	NM_001025200,NM_001906	chr16,chr16	-,+	CTRB2,CTRB1	754,12515
chr22:23854236-23855141	chr22	+	23854268	23854992	True	NM_153615,NM_020070	chr22,chr22	+,-	RGL4,IGLL1	178055,67553
chr11:59433125-59433601	chr11	+	59433301	59433456	True	NM_152716,NM_001178040	chr11,chr11	-,+	PATL1,STX3	3105,89075
chr8:97275385-97276047	chr8	+	97275475	97276033	True	NM_014754,NM_015942	chr8,chr8	+,-	PTDSS1,MTERFD1	-1364,-1679
chr7:105598333-105599294	chr7	+	105598442	105599019	True	NM_152750,NM_152749	chr7,chr7	+,-	CDHR3,ATXN7L1	4637,-81411
chr19:33071689-33071944	chr19	+	33071774	33071882	True	NM_004708,NM_032139	chr19,chr19	+,-	PDCD5,ANKRD27	211,94270
chr11:5647966-5649486	chr11	+	5648163	5649473	True	NM_130390,NM_033034,NM_021616,NM_001003827	chr11,chr11,chr11,chr11	+,-,+,+	TRIM34,TRIM5,TRIM34,TRIM34	4011,56916,-2007,-7040
chr19:55393628-55393940	chr19	+	55393695	55393812	True	NM_002000,NM_001127255,NM_133279,NM_133278,NM_133269,NM_133274,NM_133277,NM_133271,NM_133273,NM_133272	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+,+,+,+,+	FCAR,NLRP7,FCAR,FCAR,FCAR,FCAR,FCAR,FCAR,FCAR,FCAR	-8198,65120,-8198,-8198,-8198,-8198,-8198,-8198,-8198,-8198
chr10:124713792-124713992	chr10	+	124713854	124714024	True	NM_153336,NM_024942	chr10,chr10	+,-	PSTK,C10orf88	25531,1
chr9:79787298-79789123	chr9	+	79787388	79788919	True	NM_001018037,NM_015186,NM_033305,NR_026668,NM_001018038	chr9,chr9,chr9,chr9,chr9	+,+,+,-,+	VPS13A,VPS13A,VPS13A,LOC100286938,VPS13A	3441,3441,3441,3970,3441
chr2:96992771-96993294	chr2	+	96992805	96993343	True	NM_015341,NM_001163523,NM_001163524,NM_178495,NM_001008949,NM_014014	chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,+,-	NCAPH,ITPRIPL1,ITPRIPL1,ITPRIPL1,ITPRIPL1,SNRNP200	8140,-1787,-911,-921,-1794,-21498
chr5:138676186-138676418	chr5	+	138676278	138676426	True	NM_016480,NM_001033112,NM_005847	chr5,chr5,chr5	+,+,-	PAIP2,PAIP2,SLC23A1	1092,1707,42663
chr6:148662239-148663574	chr6	+	148662675	148663569	True	NR_034115,NM_015278	chr6,chr6	-,+	LOC729178,SASH1	-1136925,159
chr8:145652300-145652536	chr8	+	145652347	145652423	True	NM_145754,NM_183057,NM_016208	chr8,chr8,chr8	+,-,-	KIFC2,VPS28,VPS28	39314,1554,1554
chrX:54466622-54466824	chrX	+	54466639	54466813	True	NM_004463,NM_058163	chrX,chrX	-,+	FGD1,TSR2	55836,39
chrX:152084413-152084762	chrX	+	152084462	152084686	True	NM_001178108,NM_001178109,NM_001178106,NM_001178107,NM_001178113,NM_007150,NM_001178110,NM_001103150	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,+,+,-	ZNF185,ZNF185,ZNF185,ZNF185,ZNF185,ZNF185,ZNF185,PNMA5	-1527,-1527,-1527,-1527,1722,-1527,-1527,76125
chr5:169781696-169782972	chr5	+	169781932	169782954	True	NM_004137,NM_001034838	chr5,chr5	-,+	KCNMB1,KCNIP1	33734,-1108
chr17:6660479-6661477	chr17	+	6660712	6661454	True	NM_199139,NM_177550,NM_017523	chr17,chr17,chr17	+,-,+	XAF1,SLC13A5,XAF1	-1607,-43972,-1607
chr10:75502375-75504038	chr10	+	75502417	75503859	True	NM_198597,NR_026592,NM_004922	chr10,chr10,chr10	+,-,+	SEC24C,BMS1P4,SEC24C	271,-12145,271
chr7:94947005-94947592	chr7	+	94947013	94947646	True	NM_145872,NM_000446	chr7,chr7	+,-	ASB4,PON1	167566,6294
chr7:99765900-99766201	chr7	+	99765983	99766165	True	NM_018275,NM_024637,NM_152742,NM_012447	chr7,chr7,chr7,chr7	-,-,-,+	C7orf43,GAL3ST4,GPC2,STAG3	-9681,258,8875,9372
chr8:41655749-41656548	chr8	+	41655809	41656505	True	NM_000037,NM_178819,NM_020475,NM_020476,NM_020477	chr8,chr8,chr8,chr8,chr8	-,+,-,-,-	ANK1,AGPAT6,ANK1,ANK1,ANK1	-669,-220153,-669,-669,-669
chr19:39881796-39882041	chr19	+	39881795	39882067	True	NM_019088,NM_017592	chr19,chr19	-,+	PAF1,MED29	-116,37
chr1:33348913-33350474	chr1	+	33349179	33349753	True	NM_001171941,NM_002143	chr1,chr1	-,+	FNDC5,HPCA	-11097,2344
chr4:49492160-49493255	chr4	+	49493213	49493281	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-504999,-584398
chr8:99842174-99843120	chr8	+	99842498	99842913	True	NM_006281,NM_001142462	chr8,chr8	-,+	STK3,OSR2	-4589,113717
chr9:97401109-97401362	chr9	+	97401138	97401342	True	NM_000507,NM_001193331,NM_001127628	chr9,chr9,chr9	-,+,-	FBP1,C9orf3,FBP1	631,87608,1239
chr22:30957117-30958547	chr22	+	30957369	30958555	True	NM_004861,NM_000355	chr22,chr22	-,+	GAL3ST1,TCN2	2371,44514
chr9:4287421-4287996	chr9	+	4287511	4288029	True	NM_001042413,NM_004170	chr9,chr9	-,+	GLIS3,SLC1A1	12064,202397
chr11:7820279-7820731	chr11	+	7820405	7820710	True	NR_027711,NM_153444	chr11,chr11	+,-	OR5E1P,OR5P2	49887,-1916
chr4:159644589-159645229	chr4	+	159644687	159645045	True	NM_005038,NM_020840	chr4,chr4	-,+	PPID,FNIP2	-135,45136
chr16:83840192-83840403	chr16	+	83840192	83840252	True	NM_001080442,NM_001537	chr16,chr16	-,+	SLC38A8,HSBP1	235560,1340
chr2:68605535-68606704	chr2	+	68605535	68606724	True	NM_015463,NM_002664	chr2,chr2	-,+	CNRIP1,PLEK	-58352,-13264
chr19:42578903-42579469	chr19	+	42578903	42579042	True	NM_022752,NM_002088	chr19,chr19	+,-	ZNF574,GRIK5	1247,-8946
chr2:74644048-74645351	chr2	+	74644221	74645376	True	NM_001145054,NM_032118	chr2,chr2	-,+	C2orf81,WDR54	-117,3508
chr5:139681992-139682424	chr5	+	139682112	139682424	True	NM_031467,NM_002622	chr5,chr5	+,-	SLC4A9,PFDN1	57362,315
chr9:131132530-131133460	chr9	+	131132670	131133346	True	NR_029837,NM_030914,NM_001135947	chr9,chr9,chr9	-,+,+	MIR219-2,URM1,URM1	21697,251,251
chr1:109289694-109289992	chr1	+	109289835	109290023	True	NM_144584,NM_007269	chr1,chr1	-,+	HENMT1,STXBP3	-85687,-605
chr18:21453129-21454553	chr18	+	21453147	21454341	True	NM_000227,NM_173505,NM_001127718	chr18,chr18,chr18	+,-,+	LAMA3,ANKRD29,LAMA3	-215,-210298,-215
chr3:14582438-14582964	chr3	+	14582457	14583011	True	NM_016474,NM_001080423	chr3,chr3	+,-	C3orf19,GRIP2	110241,627
chr16:3350330-3350970	chr16	+	3350338	3350996	True	NM_153028,NM_033208	chr16,chr16	+,-	ZNF75A,TIGD7	4436,4495
chr11:20047076-20048121	chr11	+	20047153	20047795	True	NM_001111019,NM_001029865	chr11,chr11	+,-	NAV2,DBX1	-2568,134125
chr15:25064651-25065741	chr15	+	25064650	25065388	True	NM_022807,NM_022806,NM_130838,NM_022808	chr15,chr15,chr15,chr15	+,+,-,+	SNRPN,SNRPN,UBE3A,SNRPN	3405,3405,585323,3405
chr19:53696701-53697269	chr19	+	53696838	53697314	True	NM_024733,NM_173856	chr19,chr19	-,+	ZNF665,VN1R2	-219,64230
chr6:35263793-35265339	chr6	+	35264179	35265261	True	NM_018679,NM_022047	chr6,chr6	-,+	TCP11,DEF6	-154992,333
chr7:55769428-55769986	chr7	+	55769627	55769906	True	NM_182633,NR_003949	chr7,chr7	+,-	ZNF713,FKBP9L	210424,2413
chr7:55769428-55769986	chr7	-	33025083	33025142	False	NM_007270,NR_003500	chr7,chr7	+,-	FKBP9,RP9P	-28138,-42301
chr20:58516168-58517254	chr20	+	58516196	58517235	True	NM_022106,NM_014258,NM_001190827,NM_006242,NM_001190826	chr20,chr20,chr20,chr20,chr20	+,-,+,-,+	C20orf177,SYCP2,C20orf177,PPP1R3D,C20orf177	-810,-8987,-810,-844,-7435
chr4:2964014-2964613	chr4	+	2964020	2964645	True	NM_003703,NM_182982,NM_001004056,NM_001004057	chr4,chr4,chr4,chr4	-,+,+,+	NOP14,GRK4,GRK4,GRK4	523,697,697,697
chr2:51255086-51255308	chr2	+	51255085	51255281	True	NM_001135659,NM_006872,NM_004801	chr2,chr2,chr2	-,+,-	NRXN1,GTF2A1L,NRXN1	4443,-2410199,4443
chr11:46639726-46640526	chr11	+	46639729	46640569	True	NR_024589,NR_024588,NM_014741,NR_024587,NM_173811,NM_001205119,NM_001205121,NM_001205120,NM_001205122,NM_001142673	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,-,+,+,+,+,+	ATG13,ATG13,ATG13,ATG13,HARBI1,ATG13,ATG13,ATG13,ATG13,ATG13	-956,-956,-956,-956,-952,-956,-956,-956,-956,-956
chr2:160140616-160142140	chr2	+	160140620	160141842	True	NM_152528,NM_001128213,NM_033394,NM_001128212	chr2,chr2,chr2,chr2	-,-,+,-	WDSUB1,WDSUB1,TANC1,WDSUB1	1271,1311,-315527,1444
chr1:89605959-89607587	chr1	+	89606902	89607536	True	NM_198460,NM_004120	chr1,chr1	+,-	GBP6,GBP2	221899,-15103
chr4:160210976-160212606	chr4	+	160210980	160212319	True	NR_037459,NM_014247	chr4,chr4	-,+	MIR3688,RAPGEF2	-160934,-22041
chr8:75262614-75262896	chr8	+	75262736	75262828	True	NM_018972,NM_001040875,NM_020647	chr8,chr8,chr8	+,+,-	GDAP1,GDAP1,JPH1	-169,-134,-29174
chrX:27826553-27826756	chrX	+	27826598	27826752	True	NM_182506,NM_001017930	chrX,chrX	+,-	MAGEB10,DCAF8L1	-542,172864
chr6:84231514-84233264	chr6	+	84231683	84233079	True	NM_002395,NM_001170423,NM_153362	chr6,chr6,chr6	-,+,+	ME1,PRSS35,PRSS35	-90745,-9547,-9547
chr17:48419977-48421172	chr17	+	48420249	48420866	True	NM_016504,NM_022167	chr17,chr17	-,+	MRPL27,XYLT2	29763,2526
chr10:73153868-73154793	chr10	+	73153894	73154842	True	NM_001164375,NM_001171930,NM_001171931,NM_001171932,NM_022124,NM_052836	chr10,chr10,chr10,chr10,chr10,chr10	-,+,+,+,+,+	C10orf105,CDH23,CDH23,CDH23,CDH23,CDH23	324786,1848,1848,1848,1848,1848
chr10:176778-177323	chr10	+	177062	177278	True	NM_006624,NM_001164154,NM_001202465,NM_001202464,NM_001202466,NM_212479	chr10,chr10,chr10,chr10,chr10,chr10	+,-,+,+,+,+	ZMYND11,TUBB8,ZMYND11,ZMYND11,ZMYND11,ZMYND11	3126,-81558,3145,4145,3145,3145
chr8:142008840-142010474	chr8	+	142008953	142010318	True	NM_153831,NM_005607,NM_014957,NM_001199649	chr8,chr8,chr8,chr8	-,-,+,-	PTK2,PTK2,DENND3,PTK2	1144,1144,128401,1144
chr14:105216743-105217031	chr14	+	105216743	105216890	True	NM_005163,NM_021709,NM_006427	chr14,chr14,chr14	-,+,+	AKT1,SIVA1,SIVA1	43107,2579,2579
chr16:23576673-23577291	chr16	+	23576695	23577309	True	NM_019116,NR_003501,NM_001083614	chr16,chr16,chr16	+,-,-	UBFD1,EARS2,EARS2	-7884,-7999,-7999
chr7:150754212-150754504	chr7	+	150754334	150754532	True	NM_004769,NM_001164410,NM_020321,NM_020322,NM_001199693,NM_001199692,NM_003040,NM_004935,NM_001199694	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,-,+,+,+,+,+,-,+	ACCN3,CDK5,ACCN3,ACCN3,SLC4A2,SLC4A2,SLC4A2,CDK5,SLC4A2	-8780,570,-8780,-8780,5101,766,2124,570,5206
chr20:2633768-2634460	chr20	+	2633935	2634284	True	NR_004399,NR_002981,NR_031699,NR_003078,NM_006899,NM_006392,NR_027700,NR_002739,NR_002738	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,+,+,+,-,+,+,+,+	SNORD86,SNORA51,MIR1292,SNORD110,IDH3B,NOP56,NOP56,SNORD56,SNORD57	2458,1428,-563,573,10610,-732,-732,2985,3300
chr16:21965052-21965506	chr16	+	21965262	21965551	True	NM_173806,NM_003366	chr16,chr16	-,+	PDZD9,UQCRC2	46930,-711
chr19:52134225-52134890	chr19	+	52134386	52134845	True	NM_007147,NM_003830	chr19,chr19	+,-	ZNF175,SIGLEC5	-59907,-659
chr3:32827298-32827671	chr3	+	32827456	32827585	True	NM_016141,NM_001039111	chr3,chr3	-,+	DYNC1LI1,TRIM71	-215090,31924
chr16:18799969-18800327	chr16	+	18800057	18800323	True	NM_001030009,NM_001019,NM_024847	chr16,chr16,chr16	-,-,+	RPS15A,RPS15A,TMC7	1383,1383,194932
chr11:64899465-64901025	chr11	+	64899695	64900867	True	NM_032431,NM_172230,NR_037568	chr11,chr11,chr11	-,-,+	SYVN1,SYVN1,MRPL49	1186,1186,-10030
chr19:6362101-6362623	chr19	+	6362128	6362546	True	NM_006012,NM_004158,NM_032306	chr19,chr19,chr19	+,-,+	CLPP,PSPN,ALKBH7	-716,13364,9897
chr1:178307962-178309066	chr1	+	178308086	178308900	True	NM_004841,NR_027982	chr1,chr1	+,-	RASAL2,LOC100302401	1705,-244958
chr3:69100480-69100968	chr3	+	69100634	69100794	True	NM_007114,NR_036087,NM_006407	chr3,chr3,chr3	-,-,+	TMF1,MIR3136,ARL6IP5	740,-2448,33295
chrX:111888842-111889302	chrX	+	111888846	111889321	True	NM_001004308,NM_178175	chrX,chrX	+,-	ZCCHC16,LHFPL1	-562647,34107
chr7:19158719-19159657	chr7	+	19158923	19159703	True	NM_001204148,NM_000474	chr7,chr7	+,-	HDAC9,TWIST1	-610074,-1628
chr10:94967321-94967906	chr10	+	94967457	94967895	True	NM_013451,NM_000783	chr10,chr10	-,+	MYOF,CYP26A1	274229,-133869
chr2:219906131-219906651	chr2	+	219906190	219906650	True	NM_194302,NM_152389,NR_024385	chr2,chr2,chr2	-,-,+	CCDC108,CCDC108,LOC151300	-47,-47,-65235
chr1:236272735-236273049	chr1	+	236272792	236273046	True	NM_002508,NM_003272	chr1,chr1	-,+	NID1,GPR137B	-44311,32785
chr19:55107688-55109521	chr19	+	55107792	55109494	True	NM_006863,NM_145057	chr19,chr19	+,-	LILRA1,CDC42EP5	-2730,-123370
chr4:103790323-103790525	chr4	+	103790369	103790573	True	NM_001008388,NM_181890,NM_181893	chr4,chr4,chr4	+,-,-	CISD2,UBE2D3,UBE2D3	-285,-337,-366
chr11:62421158-62421448	chr11	+	62421318	62421402	True	NM_001043229,NM_030628,NM_198335,NM_198334	chr11,chr11,chr11,chr11	+,-,-,-	METTL12,INTS5,GANAB,GANAB	11376,-544,-7214,-7214
chr21:45704354-45704913	chr21	+	45704469	45704687	True	NM_175867,NM_000658,NM_000383	chr21,chr21,chr21	-,+,+	DNMT3L,AIRE,AIRE	-22370,5586,1075
chr4:56262822-56263111	chr4	+	56262821	56263151	True	NM_018475,NR_037969	chr4,chr4	+,-	TMEM165,LOC100506462	-783,-11074
chr3:129115912-129116325	chr3	+	129115928	129116374	True	NR_003111,NM_018262,NR_002992	chr3,chr3,chr3	-,+,-	RPL32P3,IFT122,SNORA7B	1958,42593,53
chr9:140143721-140144620	chr9	+	140143766	140144336	True	NM_001004353,NM_015456,NM_001001710,NM_006088	chr9,chr9,chr9,chr9	+,+,-,+	C9orf173,COBRA1,FAM166A,TUBB2C	1393,5422,-1544,-8106
chrX:107082897-107084155	chrX	+	107083040	107084146	True	NM_052817,NM_198057	chrX,chrX	+,-	MID2,TSC22D3	-14007,-64023
chr19:40227987-40228196	chr19	+	40227991	40228213	True	NM_203471,NM_001828	chr19,chr19	+,-	LGALS14,CLC	-33096,505
chr2:172749591-172750422	chr2	+	172749618	172750468	True	NM_003705,NM_003642	chr2,chr2	-,+	SLC25A12,HAT1	395,28466
chr12:4551793-4553069	chr12	+	4551895	4552827	True	NM_020996,NM_001130862	chr12,chr12	-,+	FGF6,RAD51AP1	2003,95122
chr10:72161655-72163074	chr10	+	72162233	72162834	True	NM_018239,NM_004096	chr10,chr10	-,+	LRRC20,EIF4EBP2	-19851,1026
chr12:101874858-101875874	chr12	+	101874858	101874937	True	NM_152323,NM_001177	chr12,chr12	+,-	SPIC,ARL1	-3578,-73286
chr5:149670305-149670823	chr5	+	149670310	149670870	True	NM_001008657,NM_171825,NM_015981	chr5,chr5,chr5	+,-,-	TCOF1,CAMK2A,CAMK2A	66331,-907,-907
chr14:103989147-103989462	chr14	+	103989201	103989507	True	NM_152307,NM_001823	chr14,chr14	+,-	TRMT61A,CKB	6001,-31
chr1:147931322-147931613	chr1	+	147931322	147931640	True	NM_001097616,NR_027468	chr1,chr1	+,-	GPR89C,FLJ39739	-505806,390
chr1:147931322-147931613	chr1	-	149576783	149576949	False	NM_001024599,NR_024510	chr1,chr1	-,+	HIST2H2BF,LOC728855	-177554,-381
chr1:147931322-147931613	chr1	+	143743799	143743925	False	NR_033189,NR_027469,NR_027468	chr1,chr1,chr1	+,-,-	LOC100130000,LOC100286793,FLJ39739	-56720,712,582
chr1:147931322-147931613	chr1	+	144520372	144520690	False	NR_024584,NM_001037675	chr1,chr1	-,+	LOC728875,NBPF9	1329,94268
chr1:147931322-147931613	chr1	+	144340124	144340442	False	NR_024584,NM_001037675,NR_024510,NR_024511	chr1,chr1,chr1,chr1	-,+,-,-	LOC728875,NBPF9,LOC728855,LOC728855	1363,274516,381,381
chr19:37021474-37022040	chr19	+	37021683	37022099	True	NM_001012756,NM_001166036,NM_001166037,NR_036504,NM_001166038	chr19,chr19,chr19,chr19,chr19	-,-,-,+,-	ZNF260,ZNF260,ZNF260,LOC728752,ZNF260	-2435,-2435,-2435,-41205,-2435
chr2:242716830-242717043	chr2	+	242716930	242717042	True	NM_005018,NM_022134	chr2,chr2	-,+	PDCD1,GAL3ST2	84066,-741
chr7:143896564-143897775	chr7	+	143896753	143897815	True	NM_001003702,NM_198495	chr7,chr7	-,+	ARHGEF35,CTAGE4	-3962,-16256
chr7:143896564-143897775	chr7	-	144047365	144048427	False	NM_005435,NM_001080413	chr7,chr7	+,-	ARHGEF5,NOBOX	4061,52409
chr6:393774-394125	chr6	+	393781	394171	True	NM_148959,NM_002460,NM_001195286,NR_036585	chr6,chr6,chr6,chr6	-,+,+,+	HUS1B,IRF4,IRF4,IRF4	262843,-2093,-2093,-2093
chr17:35967857-35968938	chr17	+	35968273	35968963	True	NM_007247,NM_007026,NM_198882,NM_001163546,NM_001163547,NM_001163544,NM_001163545,NM_080550	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,-,-,-,-,-,-	SYNRG,DUSP14,SYNRG,SYNRG,SYNRG,SYNRG,SYNRG,SYNRG	573,-118378,573,573,573,573,573,573
chr2:124793123-124793540	chr2	+	124793204	124793442	True	NM_032390,NM_130773	chr2,chr2	-,+	MKI67IP,CNTNAP5	-2298701,-10405
chr8:29941162-29941770	chr8	+	29941185	29941741	True	NM_016127,NM_015344	chr8,chr8	-,+	TMEM66,LEPROTL1	-536,11180
chr12:52588079-52588774	chr12	+	52588085	52588789	True	NM_182507,NM_001081492,NR_027358	chr12,chr12,chr12	-,-,+	KRT80,KRT80,LOC283404	-2301,-2301,15924
chr9:117149757-117149981	chr9	+	117149867	117149971	True	NM_030767,NM_000608	chr9,chr9	-,+	AKNA,ORM2	6764,-57849
chr20:5729253-5729766	chr20	+	5729296	5729685	True	NM_019593,NM_152504	chr20,chr20	-,+	GPCPD1,C20orf196	-137624,1357
chr19:12806313-12806896	chr19	+	12806338	12806588	True	NM_032301,NM_032332	chr19,chr19	-,+	FBXW9,WDR83	917,-25879
chr16:58663739-58663959	chr16	+	58663857	58663991	True	NM_016284,NM_206999,NM_024860	chr16,chr16,chr16	-,-,+	CNOT1,CNOT1,SETD6	-107,-107,-114525
chr19:40726458-40726923	chr19	+	40726705	40726864	True	NM_002446,NM_152479,NM_024877	chr19,chr19,chr19	+,-,-	MAP3K10,TTC9B,CNTD2	-29110,-2399,5790
chr3:81808786-81810323	chr3	+	81808803	81810283	True	NM_001167674,NM_000158	chr3,chr3	+,-	CADM2,GBE1	3197849,717
chrX:107681735-107682892	chrX	+	107681882	107682899	True	NM_033641,NM_000495,NM_033380,NM_001847	chrX,chrX,chrX,chrX	-,+,+,-	COL4A6,COL4A5,COL4A5,COL4A6	-224,254,254,-74
chrX:73012837-73013977	chrX	+	73013027	73013787	True	NR_001564,NR_003255	chrX,chrX	-,+	XIST,TSIX	58859,-1048
chrX:107683383-107683591	chrX	+	107683553	107683631	True	NM_033641,NM_033380,NM_000495,NM_001847	chrX,chrX,chrX,chrX	-,+,+,-	COL4A6,COL4A5,COL4A5,COL4A6	-1895,-456,-456,-849
chr11:62540909-62541841	chr11	+	62541212	62541518	True	NM_006473,NM_001080501	chr11,chr11	+,-	TAF6L,TMEM223	-2388,18018
chr1:20205413-20205793	chr1	+	20205430	20205570	True	NM_015207,NM_014589	chr1,chr1	+,-	OTUD3,PLA2G2E	3317,44598
chr16:67534142-67535176	chr16	+	67534293	67535170	True	NM_001138,NM_024519	chr16,chr16	-,+	AGRP,FAM65A	-16577,27546
chr11:119058112-119058338	chr11	+	119058122	119058316	True	NM_001168468,NM_024791,NM_001145018,NR_033122	chr11,chr11,chr11,chr11	+,+,-,+	PDZD3,PDZD3,CCDC153,PDZD3	-2007,-2007,8318,-2007
chr1:40350967-40352038	chr1	+	40351059	40351798	True	NM_001136493,NM_017646	chr1,chr1	+,-	MFSD2A,TRIT1	68985,-1882
chr10:99793163-99794260	chr10	+	99793163	99794299	True	NM_014472,NM_018058	chr10,chr10	+,-	C10orf28,CRTAC1	100081,-2578
chr19:542222-542470	chr19	+	542221	542433	True	NM_005317,NM_182577	chr19,chr19	+,-	GZMM,ODF3L2	1593,-67238
chr7:8302829-8304007	chr7	+	8302908	8304020	True	NM_004968,NM_152745,NM_022307,NM_001136020	chr7,chr7,chr7,chr7	-,+,-,-	ICA1,NXPH1,ICA1,ICA1	-723,169564,-1226,-1128
chr9:27284062-27284702	chr9	+	27284218	27284748	True	NR_026679,NR_026687,NM_000459	chr9,chr9,chr9	-,-,+	NCRNA00032,NCRNA00032,TEK	-1427,-1427,-175126
chr2:148603204-148604109	chr2	+	148603203	148604118	True	NM_001190882,NM_001616	chr2,chr2	-,+	ORC4,ACVR2A	174238,-685
chr15:69112088-69112454	chr15	+	69112087	69112436	True	NR_031680,NM_006305	chr15,chr15	+,-	MIR548H4,ANP32A	3866,875
chr5:121486641-121487946	chr5	+	121486729	121487928	True	NM_002317,NM_001195535	chr5,chr5	-,+	LOX,LOC728460	-72674,7942
chr1:20810674-20810914	chr1	+	20810825	20810941	True	NM_207334,NM_018584	chr1,chr1	+,-	FAM43B,CAMK2N1	67990,1837
chr16:8768582-8769050	chr16	+	8768647	8769081	True	NM_020686,NM_015421	chr16,chr16	+,-	ABAT,TMEM186	-254,122474
chr1:47279983-47280780	chr1	+	47280189	47280807	True	NM_001099772,NR_002788	chr1,chr1	+,-	CYP4B1,CYP4Z2P	-15570,85390
chr20:20344866-20345099	chr20	+	20344953	20345075	True	NM_002196,NM_016652	chr20,chr20	+,-	INSM1,CRNKL1	3689,-308263
chr17:16948760-16949384	chr17	+	16948870	16949124	True	NM_015134,NM_201274,NM_012452	chr17,chr17,chr17	+,+,-	MPRIP,MPRIP,TNFRSF13B	-2814,-2814,-73468
chr19:9416468-9416990	chr19	+	9416688	9416797	True	NM_001202406,NM_198535	chr19,chr19	+,-	ZNF559,ZNF699	17650,-893
chr15:40451027-40452418	chr15	+	40451215	40452259	True	NM_001003940,NM_001211	chr15,chr15	-,+	BMF,BUB1B	-50140,950
chr16:90075718-90076612	chr16	+	90075825	90076437	True	NM_001042610,NM_024043,NR_023348	chr16,chr16,chr16	-,-,+	DBNDD1,DBNDD1,GAS8	9550,142,12570
chr22:47136026-47136706	chr22	+	47136198	47136680	True	NM_022766,NM_014346	chr22,chr22	-,+	CERK,TBC1D22A	-2046,21837
chr3:46872525-46874456	chr3	+	46872779	46874281	True	NM_000316,NM_182702	chr3,chr3	+,-	PTH1R,PRSS42	44954,1354
chr19:9218424-9218847	chr19	+	9218563	9218768	True	NM_001005192,NM_001005193,NM_001004456	chr19,chr19,chr19	-,-,+	OR7G1,OR7G2,OR1M1	7721,-4581,-14694
chr19:45929663-45930140	chr19	+	45929835	45929945	True	NM_001166049,NM_202001,NM_012099,NM_001983	chr19,chr19,chr19,chr19	-,-,+,-	ERCC1,ERCC1,CD3EAP,ERCC1	-2658,-3015,-20426,-2658
chr20:61887457-61888126	chr20	+	61887602	61888098	True	NM_152864,NR_024389	chr20,chr20	-,+	NKAIN4,FLJ16779	-1710,-2323
chr1:11105835-11106363	chr1	+	11105890	11106412	True	NM_006610,NM_007375,NM_139208	chr1,chr1,chr1	-,+,-	MASP2,TARDBP,MASP2	934,-33262,934
chr1:20247768-20249125	chr1	+	20248104	20249174	True	NM_015207,NM_014589	chr1,chr1	+,-	OTUD3,PLA2G2E	-39267,986
chr9:102674430-102676380	chr9	+	102674882	102676136	True	NM_017919,NM_015051	chr9,chr9	+,-	STX17,ERP44	-6029,185251
chr2:39146580-39147639	chr2	+	39146654	39147427	True	NM_001145451,NR_028386	chr2,chr2	+,-	ARHGEF33,LOC375196	-209,40115
chrY:9598926-9599185	chrY	+	9598988	9599222	True	NR_001538,NR_003590	chrY,chrY	-,+	TTTY1,TTTY2B	12726,-25144
chrY:9598926-9599185	chrY	-	6271147	6271381	False	NR_001538,NR_001536	chrY,chrY	+,-	TTTY1,TTTY2	-12726,25154
chr4:134069607-134070277	chr4	+	134069662	134070128	True	NM_032961,NM_001114734,NM_020815	chr4,chr4,chr4	+,-,+	PCDH10,PABPC4L,PCDH10	341,1052825,341
chrX:35814393-35816061	chrX	+	35814634	35815859	True	NM_001099921,NM_031442	chrX,chrX	+,-	MAGEB16,TMEM47	599,-1139229
chr22:38853923-38854969	chr22	+	38854488	38854929	True	NM_016657,NM_006855,NM_152868	chr22,chr22,chr22	+,+,-	KDELR3,KDELR3,KCNJ4	9153,9153,-3285
chr4:57978353-57979406	chr4	+	57978376	57979254	True	NR_034081,NM_001553	chr4,chr4	+,-	LOC255130,IGFBP7	-2511,-1837
chr7:36421770-36422192	chr7	+	36421936	36422076	True	NM_018685,NM_001100425	chr7,chr7	+,-	ANLN,KIAA0895	7355,7718
chr6:3043977-3044449	chr6	+	3044108	3044264	True	NR_033884,NM_003804	chr6,chr6	-,+	LOC401233,RIPK1	-19103,32793
chr10:35452671-35453388	chr10	+	35453125	35453362	True	NM_001198777,NM_182771,NM_182772	chr10,chr10,chr10	-,+,+	CUL2,CREM,CREM	-73555,3104,3104
chr16:834783-835101	chr16	+	834807	835013	True	NM_001025190,NM_058192,NM_022092	chr16,chr16,chr16	-,-,+	MSLNL,RPUSD1,CHTF18	-1881,3420,3608
chr7:99685311-99685910	chr7	+	99685525	99685849	True	NM_017715,NR_029831,NR_029498,NR_029510,NM_032924,NM_006833	chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,+	ZNF3,MIR106B,MIR25,MIR93,ZNF3,COPS6	-6154,5898,5467,5671,-6154,733
chr11:119186461-119186799	chr11	+	119186460	119186834	True	NM_032015,NM_006500	chr11,chr11	+,-	RNF26,MCAM	18402,1056
chr1:110211891-110212366	chr1	+	110211923	110212298	True	NM_005272,NM_001142368,NM_000848	chr1,chr1,chr1	-,+,+	GNAT2,GSTM2,GSTM2	-56218,-1330,-1330
chr9:130564106-130564862	chr9	+	130564393	130564807	True	NM_001018078,NM_170600,NM_004957	chr9,chr9,chr9	+,-,+	FPGS,SH2D3C,FPGS	700,-23345,346
chr10:4868730-4868931	chr10	+	4868729	4868975	True	NM_001040177,NR_026743	chr10,chr10	+,-	AKR1E2,tAKR	-378,89540
chr17:19140885-19141247	chr17	+	19141048	19141160	True	NM_014964,NM_148921,NM_001102664,NR_031591	chr17,chr17,chr17,chr17	+,+,+,-	EPN2,EPN2,EPN2,MIR1180	-409,-409,-409,106777
chr17:33520289-33521017	chr17	+	33520311	33521039	True	NM_173167,NM_152462	chr17,chr17	+,-	UNC45B,AMAC1	-45526,423
chr17:33520289-33521017	chr17	-	7385696	7385942	False	NM_000937,NM_020899,NM_001128833,NM_001102614	chr17,chr17,chr17,chr17	+,-,-,+	POLR2A,ZBTB4,ZBTB4,AMAC1L3	1755,1872,-2752,-1222
chr21:35833168-35833540	chr21	+	35833299	35833513	True	NM_001127670,NM_001127669,NM_001127668,NM_058182	chr21,chr21,chr21,chr21	-,-,-,+	KCNE1,KCNE1,KCNE1,FAM165B	-5236,-1397,-1397,-85601
chr1:42633593-42634802	chr1	+	42633616	42634827	True	NM_007102,NM_033553	chr1,chr1	+,-	GUCA2B,GUCA2A	-14575,-3221
chr10:25305061-25305603	chr10	+	25305063	25305363	True	NM_024838,NM_145010	chr10,chr10	+,-	THNSL1,ENKUR	144,-33
chr6:14851417-14851981	chr6	+	14851423	14851754	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	394772,811601
chr19:55887908-55888154	chr19	+	55887945	55888065	True	NM_139172,NM_000991,NM_000641,NM_001190764,NM_001136135,NM_001136134,NM_001136137,NM_001136136	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,-,-,+,+,+,+	TMEM190,RPL28,IL11,LOC388564,RPL28,RPL28,RPL28,RPL28	138,9234,-6131,7612,9234,9234,9234,9234
chr11:128561945-128562260	chr11	+	128561950	128562198	True	NM_001167681,NM_002017,NM_001143820	chr11,chr11,chr11	+,+,-	FLI1,FLI1,ETS1	1612,1614,-104497
chr7:76110091-76110363	chr7	+	76110095	76110403	True	NR_003262,NM_001102596	chr7,chr7	-,+	FDPSL2A,DTX2	-5778,-319
chr7:76110091-76110363	chr7	+	76608268	76608380	False	NR_023383,NM_006682	chr7,chr7	+,-	PMS2P11,FGL2	1758,220820
chr6:131381294-131383240	chr6	+	131381409	131382924	True	NM_001431,NM_016377,NM_001199388,NM_001135554,NM_001135555	chr6,chr6,chr6,chr6,chr6	-,+,-,-,-	EPB41L2,AKAP7,EPB41L2,EPB41L2,EPB41L2	1600,83536,1554,1600,1554
chr14:73926536-73926929	chr14	+	73926722	73926892	True	NM_003744,NM_001005745,NM_001005744,NM_001005743,NM_024644	chr14,chr14,chr14,chr14,chr14	-,-,-,-,+	NUMB,NUMB,NUMB,NUMB,C14orf169	-1436,-1436,-1436,-1436,30751
chr9:4793990-4795575	chr9	+	4794055	4795609	True	NM_005772,NM_001199853	chr9,chr9	+,-	RCL1,AK3	-1272,-52012
chr2:43449248-43450963	chr2	+	43449283	43450998	True	NR_027251,NM_006887	chr2,chr2	+,-	LOC100129726,ZFP36L2	3351,2797
chr7:134852765-134853061	chr7	+	134852789	134852969	True	NM_018295,NR_024186,NR_024185,NM_024033	chr7,chr7,chr7,chr7	+,-,-,-	TMEM140,C7orf49,C7orf49,C7orf49	-20074,2613,2613,2613
chr19:58608124-58608825	chr19	+	58608128	58608823	True	NM_001145543,NM_007134,NM_001145544,NM_023926	chr19,chr19,chr19,chr19	-,+,-,-	ZSCAN18,ZNF135,ZSCAN18,ZSCAN18	957,-37572,957,957
chr2:102319106-102320195	chr2	+	102319108	102320178	True	NM_145687,NM_145686,NM_004834,NM_001145664	chr2,chr2,chr2,chr2	+,+,+,-	MAP4K4,MAP4K4,MAP4K4,RFX8	-4672,-4672,-4672,-227943
chr17:39084887-39086737	chr17	+	39084943	39086316	True	NM_015515,NM_001195386	chr17,chr17	-,+	KRT23,TMEM99	7570,-109564
chrX:68048115-68048348	chrX	+	68048133	68048383	True	NM_001032396,NM_004429	chrX,chrX	-,+	PJA1,EFNB1	337032,456
chrX:9434433-9434943	chrX	+	9434483	9434981	True	NM_001139466,NM_001139467,NM_005647,NM_001139468,NM_000273	chrX,chrX,chrX,chrX,chrX	+,+,+,+,-	TBL1X,TBL1X,TBL1X,TBL1X,GPR143	-3199,-3199,-1333,-3199,299074
chr6:27858884-27859989	chr6	+	27859085	27859847	True	NM_003514,NM_003527,NM_003535	chr6,chr6,chr6	-,+,-	HIST1H2AM,HIST1H2BO,HIST1H3J	1166,1355,-515
chr5:87564327-87564580	chr5	+	87564326	87564580	True	NM_153354,NM_022650	chr5,chr5	-,+	TMEM161B,RASA1	135,-999611
chr6:109703442-109704038	chr6	+	109703459	109703999	True	NM_001142404,NM_001142402,NM_001142403,NM_001142401,NM_006016,NM_003080	chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,-,-,+	CD164,CD164,CD164,CD164,CD164,SMPD2	-87,-87,-87,-87,-87,57931
chr1:112050922-112051639	chr1	+	112050925	112051441	True	NM_020683,NM_174896,NM_000677	chr1,chr1,chr1	-,+,-	ADORA3,C1orf162,ADORA3	-4182,-34372,-4182
chrX:52837116-52837666	chrX	+	52837182	52837620	True	NM_130775,NM_001009616	chrX,chrX	+,-	XAGE5,SPANXN5	3607,-10794
chr12:56545960-56546191	chr12	+	56545969	56546227	True	NM_021019,NM_002475,NM_079423,NM_001130420,NM_001199629	chr12,chr12,chr12,chr12,chr12	+,+,+,-,+	MYL6,MYL6B,MYL6,SMARCC2,MYL6B	5817,-10,5817,37174,-10
chr1:1199227-1199481	chr1	+	1199377	1199480	True	NM_058167,NM_001130413,NM_194315,NM_194457,NM_194458	chr1,chr1,chr1,chr1,chr1	-,+,-,-,-	UBE2J2,SCNN1D,UBE2J2,UBE2J2,UBE2J2	9805,11157,9805,9805,9805
chr17:37355743-37356289	chr17	+	37355948	37356338	True	NM_199248,NM_000981,NM_000723,NM_199247	chr17,chr17,chr17,chr17	-,+,-,-	CACNB1,RPL19,CACNB1,CACNB1	-2047,197,-2047,-2047
chr17:19095554-19096130	chr17	+	19095662	19096143	True	NM_006613,NM_001102664	chr17,chr17	-,+	GRAP,EPN2	-145326,44546
chr17:19095554-19096130	chr17	-	19088743	19089224	False	NM_006613,NM_001102664	chr17,chr17	-,+	GRAP,EPN2	-138407,51465
chr17:19095554-19096130	chr17	+	19018052	19018453	False	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	12328,-67716
chr17:19095554-19096130	chr17	+	18969567	18969968	False	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	60813,-19231
chr17:19095554-19096130	chr17	-	18962719	18963120	False	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	67661,-12383
chr14:73705103-73706302	chr14	+	73705155	73706295	True	NM_021260,NM_173462	chr14,chr14	-,+	ZFYVE1,PAPLN	-211235,-1001
chr12:2029017-2030165	chr12	+	2029121	2030143	True	NM_001163926,NM_172364	chr12,chr12	+,-	LRTM2,CACNA2D4	-99739,-1251
chr17:79344114-79344365	chr17	+	79344122	79344364	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	29175,-39648
chr19:7731132-7731592	chr19	+	7731132	7731399	True	NM_020415,NM_174895,NM_001193374	chr19,chr19,chr19	+,-,+	RETN,PCP2,RETN	2572,-32562,2572
chr10:47179678-47179999	chr10	+	47179773	47179959	True	NM_001137549,NM_001137548,NM_001098845,NM_001137556,NM_001040084,NM_005972	chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,-,+	FAM25G,FAM25C,ANXA8L1,FAM25B,ANXA8,PPYR1	1779,1779,-5733,1779,-5651,-96290
chr10:47179678-47179999	chr10	+	49205910	49205978	False	NM_001137549,NM_001137548,NM_002750,NM_001137556	chr10,chr10,chr10,chr10	-,-,+,-	FAM25G,FAM25C,MAPK8,FAM25B	1897,1897,403708,1897
chr10:47179678-47179999	chr10	-	48249390	48249576	False	NM_001137549,NM_001137548,NM_001098845,NM_001137556,NM_001040084,NM_002900	chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,-	FAM25G,FAM25C,ANXA8L1,FAM25B,ANXA8,RBP3	-1779,-1779,5730,-1779,5648,141465
chr19:39758022-39758941	chr19	+	39758785	39758985	True	NM_172139,NM_172138	chr19,chr19	-,+	IL28B,IL28A	-23174,171
chr19:39758022-39758941	chr19	-	39735940	39736080	False	NM_172139,NM_172138	chr19,chr19	-,+	IL28B,IL28A	-329,23076
chr7:130132411-130132635	chr7	+	130132453	130132673	True	NR_004382,NM_002402,NM_177525,NR_029899,NM_177524	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	MESTIT1,MEST,MEST,MIR335,MEST	-1440,-566,-1331,3278,-6458
chr17:12618559-12619045	chr17	+	12618699	12619064	True	NM_001146313,NM_001165962	chr17,chr17	+,-	MYOCD,ELAC2	4541,302374
chr4:2199540-2199770	chr4	+	2199543	2199797	True	NM_181808,NM_178557	chr4,chr4	-,+	POLN,NAT8L	31211,-138355
chr2:174672496-174674260	chr2	+	174672500	174673949	True	NM_145810,NM_001017371	chr2,chr2	+,-	CDCA7,SP3	-452990,155055
chr19:4279662-4279999	chr19	+	4279679	4279968	True	NM_001169126,NM_020209	chr19,chr19	-,+	TMIGD2,SHD	22510,-1132
chr19:36483830-36484271	chr19	+	36483836	36484232	True	NM_001039876,NM_001042631	chr19,chr19	-,+	C19orf46,SDHAF1	15498,1857
chr1:66803078-66804421	chr1	+	66803102	66804360	True	NM_005478,NM_001037339	chr1,chr1	-,+	INSL5,PDE4B	462639,-5360
chr12:54574693-54576092	chr12	+	54575125	54575856	True	NR_026656,NM_014311	chr12,chr12	+,-	LOC400043,SMUG1	-55321,6951
chr7:150019027-150019662	chr7	+	150019068	150019516	True	NM_001142928,NM_138434,NM_001164458,NM_023942	chr7,chr7,chr7,chr7	+,+,-,+	LRRC61,C7orf29,ACTR3C,LRRC61	779,7421,1292,779
chr3:142314917-142315211	chr3	+	142314981	142315217	True	NM_001184,NM_001145319	chr3,chr3	-,+	ATR,PLS1	-17313,11
chr7:32928825-32930512	chr7	+	32929342	32930292	True	NM_015483,NM_007270	chr7,chr7	-,+	KBTBD2,FKBP9	1229,66712
chr1:1845059-1845954	chr1	+	1845245	1845603	True	NM_138705,NM_178545	chr1,chr1	+,-	CALML6,TMEM52	662,5187
chr9:116101191-116101611	chr9	+	116101198	116101555	True	NM_001012361,NM_145241,NM_017688	chr9,chr9,chr9	-,-,+	WDR31,WDR31,BSPRY	1122,1122,10256
chr17:46015315-46016277	chr17	+	46015458	46016311	True	NM_024320,NM_018129	chr17,chr17	-,+	PRR15L,PNPO	18849,2577
chr15:77178540-77179684	chr15	+	77179366	77179641	True	NM_002902,NM_020843	chr15,chr15	+,-	RCN2,SCAPER	44320,-3149
chr4:140042421-140044260	chr4	+	140042601	140044000	True	NM_201999,NM_012118	chr4,chr4	-,+	ELF2,CCRN4L	16667,-105713
chr9:33402225-33402649	chr9	+	33402409	33402689	True	NM_001170,NM_002504	chr9,chr9	-,+	AQP7,NFX1	98,-112042
chr7:137522839-137523657	chr7	+	137523080	137523642	True	NM_004717,NM_001190906	chr7,chr7	-,+	DGKI,AKR1D1	8017,237535
chr17:79494561-79494765	chr17	+	79494620	79494702	True	NM_001077182,NM_012418,NR_037688	chr17,chr17,chr17	+,+,-	FSCN2,FSCN2,ACTG1	714,714,-14728
chr17:27915896-27916111	chr17	+	27916022	27916160	True	NM_001085454,NM_014030,NM_152345	chr17,chr17,chr17	-,-,+	GIT1,GIT1,ANKRD13B	500,500,4366
chr9:101722409-101723994	chr9	+	101722746	101723674	True	NM_173551,NM_001855	chr9,chr9	-,+	ANKS6,COL15A1	-163952,-16659
chr11:64579897-64581165	chr11	+	64580110	64580658	True	NM_004579,NM_006244,NM_130799,NM_000244,NM_130804,NM_130803,NM_130802,NM_130801,NM_130800	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,+,-,-,-,-,-,-,-	MAP4K2,PPP2R5B,MEN1,MEN1,MEN1,MEN1,MEN1,MEN1,MEN1	-9397,111484,-1922,-1922,-1344,-1344,-1897,-2075,-2075
chr3:49970991-49972121	chr3	+	49971370	49971540	True	NM_001167582,NM_005777,NM_032355,NM_001142501	chr3,chr3,chr3,chr3	+,+,-,-	RBM6,RBM6,MON1A,MON1A	5936,5936,-3925,-3925
chr22:26824590-26825080	chr22	+	26824697	26825001	True	NM_152841,NM_020437	chr22,chr22	-,+	HPS4,ASPHD2	50600,278
chr3:46408706-46410420	chr3	+	46408868	46410412	True	NM_001199149,NM_000579,NM_001100168	chr3,chr3,chr3	-,+,+	LTF,CCR5,CCR5	94802,1220,1220
chr1:29217959-29218215	chr1	+	29217966	29218232	True	NM_004437,NM_203343,NM_203342,NM_001171868,NM_001166005,NM_001166007	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,-,+,+	EPB41,EPB41,EPB41,TMEM200B,EPB41,EPB41	-4414,-4414,-4414,230831,-4414,-4414
chr14:91886560-91886764	chr14	+	91886608	91886711	True	NM_001080414,NR_003709	chr14,chr14	-,+	CCDC88C,SNORA11B	-2475,-293893
chr19:58261656-58263497	chr19	+	58261837	58262714	True	NM_173632,NM_024833	chr19,chr19	+,-	ZNF776,ZNF671	-3731,-22842
chr1:91182109-91182460	chr1	+	91182123	91182329	True	NM_020063,NM_182976	chr1,chr1	-,+	BARHL2,ZNF326	515,-721496
chr1:156541155-156541845	chr1	+	156541155	156541778	True	NM_001105669,NM_178229	chr1,chr1	+,-	TTC24,IQGAP3	7740,668
chr19:38042606-38043569	chr19	+	38042764	38043489	True	NM_016536,NM_152606	chr19,chr19	-,+	ZNF571,ZNF540	42243,-507
chr12:133263503-133263743	chr12	+	133263534	133263628	True	NM_018663,NM_006231	chr12,chr12	+,-	PXMP2,POLE	563,367
chr5:175815958-175816380	chr5	+	175815961	175816223	True	NM_138820,NM_016391	chr5,chr5	+,-	HIGD2A,NOP16	-228,-421
chr3:150915228-150916787	chr3	+	150915315	150916823	True	NM_053002,NM_013308	chr3,chr3	+,-	MED12L,GPR171	-110690,4215
chr3:193713301-193714016	chr3	+	193713308	193714032	True	NR_027764,NR_033944,NM_005524	chr3,chr3,chr3	-,-,+	LOC100128023,LOC647323,HES1	-1281,7466,139898
chr1:36039623-36039840	chr1	+	36039626	36039730	True	NM_178548,NM_024874	chr1,chr1	+,-	TFAP2E,KIAA0319L	-706,-16589
chr17:8245862-8246325	chr17	+	8245933	8246050	True	NR_024447,NM_153007	chr17,chr17	-,+	LOC100128288,ODF4	17868,-2806
chr11:71929954-71930981	chr11	+	71929961	71930814	True	NM_001113534,NM_005169,NM_001567,NM_000803,NM_001113535,NM_001113536	chr11,chr11,chr11,chr11,chr11,chr11	+,-,+,+,+,+	FOLR2,PHOX2A,INPPL1,FOLR2,FOLR2,FOLR2	-2193,24463,5067,-2193,-2193,-2193
chrY:21877707-21878314	chrY	+	21877710	21878348	True	NM_032576,NM_001146705	chrY,chrY	+,-	CYorf15B,KDM5D	-119319,28527
chr17:43300032-43301522	chr17	+	43300340	43301474	True	NM_152343,NM_005892	chr17,chr17	-,+	C17orf46,FMNL1	38055,-1099
chr15:75874209-75874807	chr15	+	75874310	75874860	True	NM_153271,NM_002833	chr15,chr15	+,-	SNX33,PTPN9	66487,-2685
chr5:140515288-140515618	chr5	+	140515305	140515590	True	NM_015669,NM_031947	chr5,chr5	+,-	PCDHB5,SLC25A2	-556,168073
chr15:63245501-63245908	chr15	+	63245648	63245809	True	NM_000366,NM_015920	chr15,chr15	+,-	TPM1,RPS27L	89028,203985
chr17:17109163-17109425	chr17	+	17109168	17109244	True	NM_178836,NM_020201	chr17,chr17	-,+	PLD6,NT5M	452,97435
chr17:48637183-48637671	chr17	+	48637311	48637463	True	NM_198377,NM_198376,NM_001267,NM_198396,NM_198384,NM_198379,NM_198378,NM_198386,NM_198387,NM_198397,NM_198385,NM_198382,NM_198383,NM_198380,NM_018896,NM_198388	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,-,+,+,+,+,+,+,+,+,+,+,+,+,+	CACNA1G,CACNA1G,CHAD,CACNA1G,CACNA1G,CACNA1G,CACNA1G,CACNA1G,CACNA1G,CACNA1G,CACNA1G,CACNA1G,CACNA1G,CACNA1G,CACNA1G,CACNA1G	985,985,-91084,985,985,985,985,985,985,985,985,985,985,985,985,985
chr5:138860920-138861154	chr5	+	138861038	138861186	True	NM_198282,NM_003339	chr5,chr5	-,+	TMEM173,UBE2D2	1207,79564
chr6:43193825-43195750	chr6	+	43194244	43195412	True	NM_006443,NM_199184,NM_032538	chr6,chr6,chr6	-,-,+	C6orf108,C6orf108,TTBK1	1849,1849,15809
chr19:17665711-17666165	chr19	+	17665779	17666181	True	NM_138454,NM_024656	chr19,chr19	-,+	NXNL1,GLT25D1	-94054,329
chr21:45683108-45683322	chr21	+	45683118	45683180	True	NM_000383,NM_175867,NM_013369	chr21,chr21,chr21	+,-,-	AIRE,DNMT3L,DNMT3L	22582,-1019,-1019
chr18:74845766-74846052	chr18	+	74845765	74846091	True	NM_001480,NM_001025101,NM_001025100	chr18,chr18,chr18	+,-,-	GALR1,MBP,MBP	115916,-991,-991
chr17:65990073-65990368	chr17	+	65990303	65990403	True	NM_002266,NM_181656,NM_181655	chr17,chr17,chr17	+,-,-	KPNA2,C17orf58,C17orf58	41444,-538,-538
chr10:129710688-129711488	chr10	+	129710803	129711215	True	NM_006504,NM_152311	chr10,chr10	+,-	PTPRE,CLRN3	-5535,-19592
chr11:124004639-124005683	chr11	+	124004856	124005640	True	NM_014622,NM_001004463	chr11,chr11	+,-	VWA5A,OR10G7	-18799,-95148
chr4:8949871-8950581	chr4	+	8950024	8950502	True	NM_018942,NM_001040071	chr4,chr4	-,+	HMX1,LOC650293	-76481,974
chr6:36238355-36239090	chr6	+	36238396	36239082	True	NM_001145717,NM_001010903	chr6,chr6	+,-	PNPLA1,C6orf222	-210,65630
chr17:79920632-79921096	chr17	+	79920651	79921091	True	NM_178493,NM_024083	chr17,chr17	-,+	NOTUM,ASPSCR1	-1594,14334
chr2:26567170-26567555	chr2	+	26567306	26567538	True	NM_033505,NM_153835	chr2,chr2	+,-	EPT1,GPR113	1415,2197
chr14:74362387-74363140	chr14	+	74362747	74363189	True	NM_152445,NM_021188	chr14,chr14	-,+	FAM161B,ZNF410	53696,-9219
chr12:24053534-24053748	chr12	+	24053535	24053624	True	NR_030625,NM_006940	chr12,chr12	+,-	MIR920,SOX5	311730,49070
chr7:57509452-57510006	chr7	+	57509682	57510012	True	NR_030766,NM_001159279	chr7,chr7	-,+	LOC642006,ZNF716	-261819,0
chr11:9010842-9012770	chr11	+	9010867	9012455	True	NM_182901,NM_020645	chr11,chr11	+,-	C11orf17,NRIP3	-78117,13199
chr16:29301647-29301951	chr16	+	29301927	29301993	True	NR_002939,NM_001031827	chr16,chr16	+,-	RUNDC2C,BOLA2	547,164342
chr9:127021159-127021695	chr9	+	127021322	127021744	True	NM_002799,NM_014397,NM_001145001,NM_001166168,NM_001166167	chr9,chr9,chr9,chr9,chr9	-,+,+,+,+	PSMB7,NEK6,NEK6,NEK6,NEK6	156027,-1177,-1177,-843,-1488
chr14:103521614-103522347	chr14	+	103521826	103522306	True	NM_001077594,NM_006035	chr14,chr14	+,-	EXOC3L4,CDC42BPB	44174,1486
chr14:94461911-94462193	chr14	+	94461967	94462181	True	NR_024183,NR_024182,NM_001202429,NR_024184	chr14,chr14,chr14,chr14	+,+,-,+	C14orf48,C14orf48,ASB2,C14orf48	1460,1434,-18891,1460
chr17:4735411-4736085	chr17	+	4735804	4735882	True	NM_001024937,NM_182566,NM_170663,NM_153827,NM_015716	chr17,chr17,chr17,chr17,chr17	+,-,+,+,+	MINK1,VMO1,MINK1,MINK1,MINK1	752,-46075,752,752,752
chr2:211336699-211337819	chr2	+	211336742	211337753	True	NM_001136575,NM_001136574,NM_006055,NM_001122633	chr2,chr2,chr2,chr2	-,-,-,+	LANCL1,LANCL1,LANCL1,CPS1	3803,3733,3795,4652
chr19:677916-678138	chr19	+	677921	678183	True	NM_005860,NM_194460	chr19,chr19	+,-	FSTL3,RNF126	-1583,-14688
chr17:79858333-79858645	chr17	+	79858379	79858569	True	NM_016476,NM_005782,NM_001002249,NM_001002248,NM_001002247,NM_001002246,NM_001002245,NM_001002244,NM_148896	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,-,+,+,+,+,+,+,+	ANAPC11,THOC4,ANAPC11,ANAPC11,ANAPC11,ANAPC11,ANAPC11,ANAPC11,NPB	-8831,-8917,-8612,-8831,-8831,-8831,-8831,-8831,1502
chr15:52473532-52475068	chr15	+	52473848	52474962	True	NM_006578,NM_016194,NM_002748	chr15,chr15,chr15	-,-,+	GNB5,GNB5,MAPK6	-1686,8653,-162488
chr1:24106521-24107042	chr1	+	24106616	24106962	True	NM_001127621,NM_020362	chr1,chr1	-,+	GALE,PITHD1	19148,-1805
chr3:38497141-38498617	chr3	+	38497203	38498424	True	NM_001106,NR_028389	chr3,chr3	+,-	ACVR2B,LOC100128640	-1464,-892
chr19:10961035-10961270	chr19	+	10961153	10961269	True	NM_001136482,NM_006858	chr19,chr19	+,-	C19orf38,TMED1	-2098,-14170
chr2:233735817-233736031	chr2	+	233735890	233736074	True	NM_001114090,NM_206895	chr2,chr2	-,+	NGEF,C2orf82	56837,-947
chr11:831868-832240	chr11	+	831868	832272	True	NM_001039490,NM_021128,NM_173584,NM_139030,NM_004357,NM_139029	chr11,chr11,chr11,chr11,chr11,chr11	+,-,+,+,+,+	CD151,POLR2L,EFCAB4A,CD151,CD151,CD151	679,10307,-4334,679,679,679
chr17:73781277-73782657	chr17	+	73781458	73782399	True	NM_005324,NM_001080419	chr17,chr17	-,+	H3F3B,UNK	-5598,-828
chr14:52781438-52781717	chr14	+	52781461	52781685	True	NM_000956,NM_001160047	chr14,chr14	+,-	PTGER2,TXNDC16	-496,237666
chr1:160063345-160063734	chr1	+	160063375	160063777	True	NM_052868,NM_004983	chr1,chr1	-,+	IGSF8,KCNJ9	4681,-12066
chr16:21217477-21219099	chr16	+	21217610	21218796	True	NM_145865,NM_003460	chr16,chr16	+,-	ANKS4B,ZP2	26219,4138
chr6:154712228-154714137	chr6	+	154712301	154713951	True	NM_015553,NM_001145287	chr6,chr6	-,+	IPCEF1,OPRM1	-34401,-304711
chr1:40236475-40236788	chr1	+	40236547	40236815	True	NM_022120,NM_001195007	chr1,chr1	-,+	OXCT2,PPIE	255,-32081
chr1:40236475-40236788	chr1	-	39980837	39981007	False	NR_003929,NM_181809	chr1,chr1	-,+	PPIEL,BMP8A	44413,-23570
chr6:10421566-10422425	chr6	+	10421702	10422460	True	NM_001032280,NM_003220,NM_001042425,NR_033910	chr6,chr6,chr6,chr6	-,-,-,+	TFAP2A,TFAP2A,TFAP2A,LOC100130275	-9095,-6232,-1905,-9202
chr9:95186088-95187047	chr9	+	95186094	95186964	True	NM_005014,NM_001012267	chr9,chr9	-,+	OMD,CENPP	-73,-98404
chr6:42859485-42860625	chr6	+	42859788	42860358	True	NM_001008739,NM_198486	chr6,chr6	-,+	C6orf226,RPL7L1	-1234,-12176
chr19:52907571-52907940	chr19	+	52907706	52907842	True	NM_001102657,NM_032423	chr19,chr19	-,+	ZNF836,ZNF528	-232810,-6636
chr10:13392331-13393526	chr10	+	13392384	13393564	True	NM_001195604,NM_012247,NM_001195602,NM_182751	chr10,chr10,chr10,chr10	-,-,-,+	SEPHS1,SEPHS1,SEPHS1,MCM10	-2086,-2086,-2086,-188881
chr15:89180724-89181613	chr15	+	89180852	89181557	True	NR_026645,NM_002201	chr15,chr15	-,+	DET1,ISG20	-90940,481
chr3:64199048-64199964	chr3	+	64199077	64199881	True	NM_198859,NM_001128149	chr3,chr3	-,+	PRICKLE2,ATXN7	11300,-245715
chr17:21535250-21537013	chr17	+	21536007	21536843	True	NM_001113434,NM_001194958	chr17,chr17	-,+	C17orf51,KCNJ18	-81066,-227610
chr1:48415812-48417380	chr1	+	48416027	48417048	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	45565,271308
chr7:27496959-27497715	chr7	+	27496961	27497666	True	NM_001989,NM_152740	chr7,chr7	+,-	EVX1,HIBADH	-214848,205005
chr7:27496959-27497715	chr7	-	73609753	73610326	False	NR_030321,NM_002914	chr7,chr7	+,-	MIR590,RFC2	-4277,58462
chr17:19284292-19284846	chr17	+	19284300	19284734	True	NM_001198695,NM_002749,NM_002404,NM_139033,NM_139032,NM_139034	chr17,chr17,chr17,chr17,chr17,chr17	-,+,-,+,+,+	MFAP4,MAPK7,MFAP4,MAPK7,MAPK7,MAPK7	5848,-2577,5848,-3317,-3317,-2577
chr2:73441814-73443330	chr2	+	73441824	73443352	True	NM_006062,NM_032319	chr2,chr2	+,-	SMYD5,C2orf7	-510,17054
chr7:96653681-96653891	chr7	+	96653791	96653905	True	NM_005221,NM_005222	chr7,chr7	-,+	DLX5,DLX6	288,-18552
chr11:12133216-12133431	chr11	+	12133217	12133459	True	NM_013253,NM_014632	chr11,chr11	-,+	DKK3,MICAL2	-102300,-1131
chr4:103940939-103941704	chr4	+	103941001	103941714	True	NM_001008388,NM_001100874,NM_139173	chr4,chr4,chr4	+,-,-	CISD2,NHEDC1,NHEDC1	-150919,-105,-105
chr3:27412317-27413560	chr3	+	27412486	27413444	True	NM_052953,NM_199347	chr3,chr3	+,-	LRRC3B,NEK10	-748237,-1574
chr12:125022539-125022750	chr12	+	125022543	125022673	True	NM_001077261,NM_181709	chr12,chr12	-,+	NCOR2,FAM101A	29387,-248884
chr13:109926966-109927948	chr13	+	109927240	109927876	True	NM_003749,NM_001198950	chr13,chr13	-,+	IRS2,MYO16	511101,-645720
chr19:17971150-17971380	chr19	+	17971207	17971429	True	NM_000980,NM_000215,NR_001593,NR_000012	chr19,chr19,chr19,chr19	+,-,+,+	RPL18A,JAK3,RPL18AP3,SNORA68	-527,-12366,-531,1967
chr10:45498896-45499250	chr10	+	45498914	45499270	True	NM_001039380,NM_006963	chr10,chr10	-,+	C10orf25,ZNF22	-2444,-2693
chr3:154021595-154023429	chr3	+	154021763	154022948	True	NM_015595,NM_001114397	chr3,chr3	+,-	ARHGEF26,DHX36	-182665,19391
chr17:17398592-17399131	chr17	+	17398603	17399139	True	NM_016084,NM_018019,NM_001199989	chr17,chr17,chr17	-,+,-	RASD1,MED9,RASD1	620,-18354,620
chr3:53104859-53105296	chr3	+	53105212	53105308	True	NM_016329,NM_006254	chr3,chr3	-,+	SFMBT1,PRKCD	-25123,89914
chr2:74274544-74274885	chr2	+	74274563	74274883	True	NM_144993,NM_001035505	chr2,chr2	+,-	TET3,BOLA3	-1164,100206
chr13:21716993-21718517	chr13	+	21717159	21718170	True	NM_001166017,NM_005870	chr13,chr13	-,+	SKA3,SAP18	32622,-2567
chr11:63754823-63756027	chr11	+	63754932	63755844	True	NM_017670,NR_003089,NM_173587	chr11,chr11,chr11	+,+,-	OTUB1,OTUB1,RCOR2	-1658,-1658,-70616
chr5:124069252-124071058	chr5	+	124069466	124071048	True	NM_004384,NM_020747	chr5,chr5	+,-	CSNK1G3,ZNF608	-1221733,9807
chr13:108869789-108870552	chr13	+	108870193	108870538	True	NM_206937,NM_001098268,NM_032859,NM_002312	chr13,chr13,chr13,chr13	-,-,+,-	LIG4,LIG4,ABHD13,LIG4	-2311,228,224,-3063
chr20:37856294-37856675	chr20	+	37856293	37856711	True	NR_033905,NR_027124	chr20,chr20	+,-	DHX35,LOC339568	-265367,-2902
chr1:248637360-248637685	chr1	+	248637395	248637685	True	NM_001004694,NM_001005495	chr1,chr1	-,+	OR2T29,OR2T3	85139,-794
chr1:248637360-248637685	chr1	-	248737024	248737314	False	NM_001013355,NM_001001821	chr1,chr1	+,-	OR2G6,OR2T34	-52127,794
chr3:47943020-47944018	chr3	+	47943187	47943870	True	NR_031595,NM_003074	chr3,chr3	+,-	MIR1226,SMARCC1	-52202,-119782
chr19:50352806-50353813	chr19	+	50352859	50353812	True	NM_017432,NM_007254	chr19,chr19	+,-	PTOV1,PNKP	603,17060
chr21:37848796-37850128	chr21	+	37849091	37850059	True	NM_005441,NM_144492,NM_001146079	chr21,chr21,chr21	+,-,-	CHAF1B,CLDN14,CLDN14	-91454,2379,2379
chr20:2488996-2489291	chr20	+	2489208	2489284	True	NM_024325,NM_080751	chr20,chr20	-,+	ZNF343,TMC2	544,27968
chr17:46651358-46651779	chr17	+	46651358	46651766	True	NM_024015,NR_029608,NM_002146,NR_033201	chr17,chr17,chr17,chr17	-,-,-,+	HOXB4,MIR10A,HOXB3,LOC404266	4027,5593,94,16056
chr11:105559141-105561034	chr11	+	105559519	105561075	True	NM_032424,NM_001112812	chr11,chr11	-,+	KIAA1826,GRIA4	331937,-78167
chr14:103565041-103566586	chr14	+	103565067	103566532	True	NM_001077594,NM_006035	chr14,chr14	+,-	EXOC3L4,CDC42BPB	-52,-41325
chr1:165325929-165326178	chr1	+	165326040	165326102	True	NM_177398,NM_001174069,NM_001005214	chr1,chr1,chr1	-,-,+	LMX1A,LMX1A,LRRC52	-88,-562,187375
chrX:37849418-37850733	chrX	+	37849608	37850626	True	NM_006520,NM_012274	chrX,chrX	-,+	DYNLT3,CXorf27	-142719,-139
chr1:29138914-29139119	chr1	+	29139023	29139149	True	NM_000911,NM_005644	chr1,chr1	+,-	OPRD1,TAF12	-420,-169419
chr4:152019957-152020380	chr4	+	152020162	152020416	True	NR_000007,NM_001006,NM_001128924	chr4,chr4,chr4	+,+,-	SNORD73A,RPS3A,SH3D19	4562,337,76338
chr11:123525750-123526587	chr11	+	123525818	123526441	True	NM_020716,NM_001040151,NM_018400	chr11,chr11,chr11	+,-,-	GRAMD1B,SCN3B,SCN3B	-129341,-503,-503
chr3:130644857-130646175	chr3	+	130644921	130645893	True	NM_001001487,NM_014065	chr3,chr3	+,-	ATP2C1,ASTE1	-31538,99803
chr15:42754651-42755289	chr15	+	42754813	42754889	True	NM_022473,NM_003825	chr15,chr15	-,+	ZFP106,SNAP23	-5083,32945
chr7:74866337-74866813	chr7	+	74866343	74866789	True	NM_001145064,NR_003664	chr7,chr7	-,+	GATSL2,SPDYE8P	602,69743
chr7:74866337-74866813	chr7	+	99868917	99869019	False	NR_028040,NM_001004351,NR_028039,NR_028038,NM_178831	chr7,chr7,chr7,chr7,chr7	-,+,-,-,-	GATS,SPDYE3,GATS,GATS,GATS	886,36305,886,886,886
chr7:74866337-74866813	chr7	-	72569870	72570192	False	NR_002206,NR_003664,NR_003580	chr7,chr7,chr7	+,-,+	GTF2IP1,SPDYE8P,LOC100093631	-895,-69561,-909
chr7:74866337-74866813	chr7	-	74379635	74379958	False	NM_001025202,NM_001145063	chr7,chr7	-,+	STAG3L2,GATSL1	-72904,-603
chr7:74866337-74866813	chr7	+	74652278	74652600	False	NR_002206,NM_001003795,NR_003580	chr7,chr7,chr7	-,+,-	GTF2IP1,GTF2IRD2B,LOC100093631	895,-143983,909
chr4:41257141-41258758	chr4	+	41257619	41258730	True	NM_173075,NM_004181	chr4,chr4	-,+	APBB2,UCHL1	-40984,167
chr19:48956380-48956844	chr19	+	48956383	48956579	True	NM_013348,NM_001080434,NM_170720,NM_031485	chr19,chr19,chr19,chr19	+,-,+,+	KCNJ14,LMTK3,KCNJ14,GRWD1	2186,59917,7926,-7404
chr7:105926286-105926971	chr7	+	105926309	105926964	True	NM_152750,NM_005746	chr7,chr7	+,-	CDHR3,NAMPT	-322710,-671
chr8:96282288-96283561	chr8	+	96282347	96283578	True	NM_177965,NM_024613	chr8,chr8	-,+	C8orf37,PLEKHF2	-885,-136455
chr1:45266396-45266972	chr1	+	45266568	45266802	True	NM_001013632,NM_004073,NM_001136537	chr1,chr1,chr1	-,+,+	TCTEX1D4,PLK3,BTBD19	6205,-583,7351
chr4:129731389-129732164	chr4	+	129731512	129732069	True	NM_199320,NM_024900,NM_144643	chr4,chr4,chr4	+,+,-	PHF17,PHF17,SCLT1	-791,-791,282745
chr11:57108474-57109679	chr11	+	57108506	57109578	True	NM_002559,NM_003146	chr11,chr11	+,-	P2RX3,SSRP1	-2616,-5155
chr5:35229395-35229613	chr5	+	35229394	35229658	True	NM_194283,NM_000949	chr5,chr5	+,-	DNAJC21,PRLR	-299753,1215
chr6:41513393-41513633	chr6	+	41513392	41513506	True	NM_001012426,NM_001012427,NM_007162,NM_138457	chr6,chr6,chr6,chr6	+,+,-,+	FOXP4,FOXP4,TFEB,FOXP4	657,657,189342,657
chr20:42296425-42296680	chr20	+	42296519	42296725	True	NM_001008901,NM_002466	chr20,chr20	-,+	GTSF1L,MYBL2	58967,-861
chr19:3987580-3988169	chr19	+	3987609	3987868	True	NR_002602,NM_015897,NM_001961	chr19,chr19,chr19	-,+,-	SNORD37,PIAS4,EEF2	-5039,19880,-2148
chr12:133464428-133464653	chr12	+	133464473	133464587	True	NM_018223,NM_019591,NM_001161346,NM_001161347,NM_001161344,NM_001161345	chr12,chr12,chr12,chr12,chr12,chr12	-,+,-,-,-,-	CHFR,ZNF26,CHFR,CHFR,CHFR,CHFR	-269,98468,-269,-269,-269,-269
chr12:8389777-8390263	chr12	+	8389817	8390292	True	NR_024254,NM_018088,NR_026788	chr12,chr12,chr12	-,-,+	LOC653113,FAM90A1,FAM66C	5300,-9603,-57063
chr14:75083136-75083493	chr14	+	75083141	75083529	True	NM_015962,NM_000428	chr14,chr14	+,-	FCF1,LTBP2	96320,-4107
chr2:220118740-220118963	chr2	+	220118811	220119005	True	NM_006000,NR_003063,NR_026909,NM_024506,NM_001008910	chr2,chr2,chr2,chr2,chr2	-,+,+,-,+	TUBA4A,TUBA4B,STK16,GLB1L,STK16	-173,-897,-8661,-8680,-8670
chr22:38505994-38506200	chr22	+	38506173	38506237	True	NM_012407,NM_025045	chr22,chr22	+,-	PICK1,BAIAP2L2	-52962,489
chr19:49315762-49316315	chr19	+	49315897	49316353	True	NM_019113,NR_028451,NM_001164773,NR_028450,NM_001190	chr19,chr19,chr19,chr19,chr19	+,-,-,-,-	FGF21,BCAT2,BCAT2,BCAT2,BCAT2	-56604,-1719,-1577,-1577,-1577
chr1:12846874-12847316	chr1	+	12846894	12846963	True	NM_023013,NM_001146344	chr1,chr1	+,-	PRAMEF1,PRAMEF11	4582,44360
chr22:36022975-36023384	chr22	+	36023137	36023415	True	NM_203377,NM_030641,NM_203378,NM_005368	chr22,chr22,chr22,chr22	-,+,-,-	MB,APOL6,MB,MB	-3736,21008,-9582,-9753
chr8:144946185-144946555	chr8	+	144946218	144946604	True	NM_000837,NM_031308	chr8,chr8	+,-	GRINA,EPPK1	117621,880
chr10:111983252-111984451	chr10	+	111983506	111984318	True	NM_005962,NM_005871	chr10,chr10	+,-	MXI1,SMNDC1	1443,80446
chr9:134377426-134377836	chr9	+	134377440	134377532	True	NM_001136114,NM_001136113,NM_001135954,NM_007171,NM_001077365,NM_001077366	chr9,chr9,chr9,chr9,chr9,chr9	+,+,-,+,+,+	POMT1,POMT1,UCK1,POMT1,POMT1,POMT1	756,756,29180,756,756,756
chr6:116382850-116384709	chr6	+	116382855	116384307	True	NM_002031,NR_027338	chr6,chr6	-,+	FRK,TPI1P3	-934,-23014
chr7:38670961-38671744	chr7	+	38671234	38671782	True	NM_001635,NM_139316,NM_001166018	chr7,chr7,chr7	-,-,+	AMPH,AMPH,POU6F2	-67,-67,345826
chrX:118107936-118108175	chrX	+	118107952	118108216	True	NM_001031855,NM_024778,NM_020721	chrX,chrX,chrX	+,+,-	LONRF3,LONRF3,KIAA1210	496,496,176376
chr7:54611288-54612439	chr7	+	54611359	54612351	True	NM_182546,NM_001012456	chr7,chr7	+,-	VSTM2A,SEC61G	-1392,214638
chr9:129094908-129096492	chr9	+	129095009	129096418	True	NM_001006618,NM_001011703,NM_033446	chr9,chr9,chr9	-,+,+	MAPKAP1,FAM125B,FAM125B	-625496,-5938,-5938
chr15:75108857-75109140	chr15	+	75108856	75109184	True	NM_021819,NM_001030005,NM_001099436	chr15,chr15,chr15	+,+,-	LMAN1L,CPLX3,ULK3	-3713,9766,26418
chr7:119913799-119914333	chr7	+	119914147	119914310	True	NM_012281,NM_012338	chr7,chr7	+,-	KCND2,TSPAN12	-476,583917
chr7:158495105-158496037	chr7	+	158495233	158496067	True	NM_017760,NM_018051	chr7,chr7	-,+	NCAPG2,WDR60	1503,153201
chr2:1416493-1417104	chr2	+	1416499	1417123	True	NM_175721,NM_175719,NM_012293,NM_175722,NM_000547	chr2,chr2,chr2,chr2,chr2	+,+,-,+,+	TPO,TPO,PXDN,TPO,TPO	1056,109,331218,1056,109
chr22:51043192-51043419	chr22	+	51043215	51043461	True	NM_016431,NM_012324,NM_005198	chr22,chr22,chr22	+,+,-	MAPK8IP2,MAPK8IP2,CHKB	-1704,-4135,-21787
chr8:57894773-57895580	chr8	+	57895068	57895591	True	NR_026772,NM_017813	chr8,chr8	+,-	C8orf71,IMPAD1	296510,10899
chr12:70179620-70181386	chr12	+	70179657	70181319	True	NM_001024647,NM_032735	chr12,chr12	+,-	RAB3IP,BEST3	-6954,-86461
chr19:10679949-10680280	chr19	+	10680055	10680256	True	NM_079421,NM_023008,NR_031603,NM_001800	chr19,chr19,chr19,chr19	-,-,+,-	CDKN2D,KRI1,MIR1238,CDKN2D	-400,-3353,-17308,-424
chr1:19219191-19219680	chr1	+	19219340	19219726	True	NM_001161504,NM_170726,NM_003748,NM_001135254	chr1,chr1,chr1,chr1	-,-,-,+	ALDH4A1,ALDH4A1,ALDH4A1,PAX7	-1955,9617,9617,-261892
chr11:1785524-1786765	chr11	+	1785557	1786767	True	NM_001909,NM_001012416,NM_053005	chr11,chr11,chr11	-,+,-	CTSD,KRTAP5-6,MOB2	-335,-67183,-56
chr17:74262737-74263258	chr17	+	74262926	74263276	True	NM_052916,NM_182565	chr17,chr17	-,+	RNF157,FAM100B	-26536,-1692
chr16:25024639-25026005	chr16	+	25025125	25025997	True	NM_018054,NM_001006634,NM_001032391	chr16,chr16,chr16	-,-,+	ARHGAP17,ARHGAP17,LCMT1	728,728,97049
chr20:4720520-4722159	chr20	+	4720640	4721963	True	NR_024267,NR_024268,NR_024269,NM_012409	chr20,chr20,chr20,chr20	-,-,-,+	PRNT,PRNT,PRNT,PRND	125,125,125,-18135
chr3:197480904-197482475	chr3	+	197481032	197482232	True	NM_032288,NM_001145642,NR_027840,NM_001011537	chr3,chr3,chr3,chr3	+,-,+,+	FYTTD1,KIAA0226,FYTTD1,FYTTD1	-4469,-4464,-3832,-4669
chr7:4169106-4169547	chr7	+	4169190	4169558	True	NM_020144,NR_027816	chr7,chr7	-,+	PAPOLB,SDK1	732117,-14
chr1:152646812-152647960	chr1	+	152646933	152647974	True	NM_178429,NM_178431	chr1,chr1	+,-	LCE2C,LCE3A	-204,-51354
chr14:75389071-75389478	chr14	+	75389089	75389391	True	NM_031464,NR_033814	chr14,chr14	-,+	RPS6KL1,DLST	-26,-40546
chr13:65530905-65532122	chr13	+	65531004	65532093	True	NR_002171,NM_020403	chr13,chr13	+,-	OR7E156P,PCDH9	-1219499,2272425
chr10:105157484-105158023	chr10	+	105157513	105158072	True	NM_014976,NR_031707,NM_032747	chr10,chr10,chr10	+,-,-	PDCD11,MIR1307,USMG5	-1160,-3355,-1290
chr17:74023463-74023729	chr17	+	74023467	74023713	True	NM_001258,NM_001988	chr17,chr17	+,-	CDK3,EVPL	-26531,14
chr11:70932432-70933078	chr11	+	70932513	70932861	True	NM_018161,NM_012309	chr11,chr11	+,-	NADSYN1,SHANK2	231355,2997
chr20:62179593-62179921	chr20	+	62179592	62179876	True	NM_024059,NM_080823	chr20,chr20	+,-	C20orf195,SRMS	4496,-735
chr19:3585973-3586226	chr19	+	3585999	3586099	True	NM_001060,NM_133261	chr19,chr19	-,+	TBXA2R,GIPC3	20782,-481
chr8:145981196-145981508	chr8	+	145981208	145981408	True	NM_138367,NM_213605	chr8,chr8	-,+	ZNF251,ZNF517	-238,42852
chr12:31225354-31226348	chr12	+	31225600	31226292	True	NM_004399,NM_001135811,NM_030653,NM_152438	chr12,chr12,chr12,chr12	+,-,+,+	DDX11,FAM60A,DDX11,DDX11	486,252879,486,486
chr12:31225354-31226348	chr12	-	9601310	9601460	False	NR_033399,NR_024374	chr12,chr12	-,+	DDX12,LOC642846	-542,-165108
chr10:112259355-112260016	chr10	+	112259429	112260047	True	NM_005871,NM_004419	chr10,chr10	-,+	SMNDC1,DUSP5	-194722,-1855
chr12:96393955-96394373	chr12	+	96393977	96394083	True	NM_152435,NM_002108	chr12,chr12	+,-	AMDHD1,HAL	-56957,-3906
chr5:10623858-10624529	chr5	+	10623863	10624162	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-59479,137282
chr1:110653204-110653701	chr1	+	110653317	110653693	True	NM_006492,NM_203412	chr1,chr1	-,+	ALX3,UBL4B	-39995,1368
chr2:62078302-62078562	chr2	+	62078302	62078402	True	NR_037710,NM_032180,NM_001201543,NM_152516	chr2,chr2,chr2,chr2	-,-,-,+	FAM161A,FAM161A,FAM161A,COMMD1	2942,2942,2942,54400
chr19:1860817-1861097	chr19	+	1860824	1861132	True	NR_034114,NM_031918	chr19,chr19	+,-	LOC100288123,KLF16	-38787,2482
chr2:207081832-207082545	chr2	+	207081923	207082495	True	NM_001098199,NM_005279,NR_002590	chr2,chr2,chr2	-,-,+	GPR1,GPR1,SNORA41	326,326,-55023
chr1:157153483-157155441	chr1	+	157153670	157155185	True	NM_001145312,NR_001560	chr1,chr1	-,+	ETV3,CYCSP52	-45287,-55568
chr21:43429947-43430164	chr21	+	43429951	43430189	True	NR_027273,NM_020727,NM_001098402,NM_001098403	chr21,chr21,chr21,chr21	+,-,-,-	C21orf121,ZNF295,ZNF295,ZNF295	11923,357,357,357
chr18:67622953-67623680	chr18	+	67623203	67623704	True	NM_006566,NM_004232	chr18,chr18	-,+	CD226,SOCS6	585,332432
chr7:53069871-53070259	chr7	+	53070030	53070160	True	NM_182595,NR_004422	chr7,chr7	+,-	POM121L12,HPVC1	33188,1200006
chr2:220146470-220146739	chr2	+	220146546	220146788	True	NM_001039550,NR_029688,NM_006736	chr2,chr2,chr2	+,-,+	DNAJB2,MIR153-1,DNAJB2	-2557,12184,-2557
chr6:158956382-158957257	chr6	+	158956506	158957133	True	NM_006519,NM_020823	chr6,chr6	-,+	DYNLT1,TMEM181	108728,334
chr1:183166665-183167435	chr1	+	183166895	183167151	True	NM_170706,NM_005562	chr1,chr1	-,+	NMNAT2,LAMC2	106908,-11776
chr20:57415372-57415599	chr20	+	57415455	57415545	True	NM_016592,NR_002785	chr20,chr20	+,-	GNAS,GNAS-AS1	-711,10463
chr9:116918664-116918992	chr9	+	116918690	116918910	True	NM_138424,NM_032888	chr9,chr9	-,+	KIF12,COL27A1	-57353,-512
chr6:55667067-55667804	chr6	+	55667074	55667685	True	NM_021073,NM_207410	chr6,chr6	-,+	BMP5,GFRAL	72754,-474858
chr12:121161851-121163609	chr12	+	121162107	121163499	True	NM_000017,NM_198202	chr12,chr12	+,-	ACADS,POP5	71,-142906
chr1:44413293-44414421	chr1	+	44413486	44414388	True	NM_014652,NM_006934	chr1,chr1	+,-	IPO13,SLC6A9	-1059,68659
chr6:158242000-158243560	chr6	+	158242333	158243595	True	NM_016224,NM_032861	chr6,chr6	+,-	SNX9,SERAC1	698,345768
chr12:120636133-120636989	chr12	+	120636282	120636885	True	NM_053275,NM_012240,NM_006836,NM_001002	chr12,chr12,chr12,chr12	-,+,-,-	RPLP0,SIRT4,GCN1L1,RPLP0	2180,103238,-3769,2180
chr3:42201658-42202612	chr3	+	42201949	42202612	True	NM_014965,NM_001174138	chr3,chr3	+,-	TRAK1,CCK	-340,102877
chr12:8687612-8688063	chr12	+	8687731	8688101	True	NM_014358,NM_080387	chr12,chr12	-,+	CLEC4E,CLEC4D	5507,-21647
chr14:24542522-24542754	chr14	+	24542614	24542740	True	NM_006032,NM_006177	chr14,chr14	+,-	CPNE6,NRL	-1909,11142
chr10:114129103-114129512	chr10	+	114129230	114129363	True	NM_016234,NR_028134,NM_203380,NM_203379	chr10,chr10,chr10,chr10	+,-,+,+	ACSL5,GUCY2GP,ACSL5,ACSL5	6592,-12877,5659,4552
chr6:166400405-166401121	chr6	+	166400753	166401068	True	NR_026860,NR_026861,NR_027284	chr6,chr6,chr6	-,-,+	C6orf176,C6orf176,LOC441177	509,509,-12
chr1:40044278-40045322	chr1	+	40044431	40044714	True	NM_001135653,NM_003819,NM_001135654,NM_181809	chr1,chr1,chr1,chr1	-,-,-,+	PABPC4,PABPC4,PABPC4,BMP8A	-1910,-1910,-1910,-87164
chr16:86593574-86594326	chr16	+	86593683	86594182	True	NM_001159380,NM_001159378,NM_001159379,NR_027490,NM_005251,NM_022764,NM_001159377,NR_027489,NR_026674	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	-,-,-,-,+,-,-,-,+	MTHFSD,MTHFSD,MTHFSD,MTHFSD,FOXC2,MTHFSD,MTHFSD,MTHFSD,FLJ30679	-4874,-4842,-4842,-4842,6674,-4842,-4842,-4842,-4808
chr9:109876814-109878414	chr9	+	109876999	109878259	True	NM_002874,NR_031752	chr9,chr9	+,-	RAD23B,MIR548Q	167284,-28283
chr16:3357042-3358516	chr16	+	3357230	3358478	True	NM_153028,NM_033208	chr16,chr16	+,-	ZNF75A,TIGD7	-1853,-1791
chrY:14532356-14532631	chrY	+	14532391	14532559	True	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	241738,880
chr20:44651836-44652395	chr20	+	44651920	44652443	True	NM_001134771,NM_022095,NM_020708	chr20,chr20,chr20	+,-,+	SLC12A5,ZNF335,SLC12A5	-1649,-51087,5377
chrY:14505064-14505733	chrY	+	14505170	14505312	True	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	268985,28127
chr6:137242446-137242679	chr6	+	137242533	137242601	True	NR_027994,NM_001008783	chr6,chr6	-,+	NHEG1,SLC35D3	71817,800
chr17:75084998-75085481	chr17	+	75085016	75085496	True	NM_001204408,NR_036200,NR_027058,NM_001204410,NR_003013	chr17,chr17,chr17,chr17,chr17	+,-,+,+,+	SEC14L1,MIR4316,C17orf86,SEC14L1,SCARNA16	-342,307690,-342,36,-8
chr7:99757197-99757742	chr7	+	99757490	99757734	True	NM_018275,NM_024637,NM_001008395	chr7,chr7,chr7	-,-,+	C7orf43,GAL3ST4,C7orf59	-1188,8689,-11011
chr14:102825429-102826651	chr14	+	102825812	102826566	True	NM_001177612,NM_001177611,NM_032630,NM_014844,NM_001172631	chr14,chr14,chr14,chr14,chr14	-,-,-,+,+	CINP,CINP,CINP,TECPR2,TECPR2	2737,2535,2737,2733,2733
chr2:103398632-103400471	chr2	+	103398992	103400503	True	NM_144632,NM_032718	chr2,chr2	+,-	TMEM182,MFSD9	-20562,-45655
chr4:3766256-3766475	chr4	+	3766306	3766436	True	NM_000683,NR_034136	chr4,chr4	+,-	ADRA2C,LOC100133461	1859,-86724
chr22:42395233-42396652	chr22	+	42395309	42396634	True	NM_152613,NM_024053	chr22,chr22	+,-	WBP2NL,CENPM	-631,-52161
chr14:106437078-106438062	chr14	+	106437258	106437996	True	NR_026800	chr14	+	KIAA0125	-53472
chr14:23652823-23653108	chr14	+	23652836	23653158	True	NM_012244,NM_017924	chr14,chr14	-,+	SLC7A8,C14orf119	13,-88099
chr5:140619459-140619740	chr5	+	140619534	140619771	True	NM_018935,NR_001282,NR_001281,NM_031947	chr5,chr5,chr5,chr5	+,+,+,-	PCDHB15,PCDHB19P,PCDHB18,SLC25A2	5375,20,-5647,63892
chr1:151161822-151162246	chr1	+	151162033	151162235	True	NM_001135637,NM_001135636,NM_003557,NM_005997,NM_001135638	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	PIP5K1A,PIP5K1A,PIP5K1A,VPS72,PIP5K1A	8785,8785,8785,455,8785
chr11:116659689-116661127	chr11	+	116659693	116661115	True	NM_003904,NM_000040,NM_001166598,NM_052968	chr11,chr11,chr11,chr11	-,+,-,-	ZNF259,APOC3,APOA5,APOA5	-954,39508,2071,2071
chr17:45401222-45401437	chr17	+	45401314	45401456	True	NM_001195192,NM_001256,NM_152347	chr17,chr17,chr17	+,-,+	C17orf57,CDC27,C17orf57	-38,-134649,-38
chr17:45005827-45006522	chr17	+	45005845	45006535	True	NM_203400,NM_004287,NM_054022,NM_001012511	chr17,chr17,chr17,chr17	-,+,+,+	RPRML,GOSR2,GOSR2,GOSR2	50129,-5410,-5410,-5410
chr5:90676922-90678397	chr5	+	90677315	90678430	True	NM_020801,NR_027435	chr5,chr5	-,+	ARRDC3,LOC100129716	769,-1209
chrX:48168286-48168525	chrX	+	48168330	48168574	True	NM_021014,NM_005635	chrX,chrX	-,+	SSX3,SSX1	47618,-53588
chrX:48168286-48168525	chrX	+	52686148	52686256	False	NR_027250,NM_173358	chrX,chrX	+,-	SSX8,SSX7	-34218,-2198
chr3:52279293-52279600	chr3	+	52279299	52279591	True	NM_001122870,NM_007284,NM_144641	chr3,chr3,chr3	+,-,+	PPM1M,TWF2,PPM1M	594,-6116,217
chr12:5305254-5306112	chr12	+	5305573	5306169	True	NM_006422,NM_002234	chr12,chr12	-,+	AKAP3,KCNA5	-551230,-152540
chr8:144692084-144692474	chr8	+	144692261	144692387	True	NM_023078,NM_032862,NM_003313	chr8,chr8,chr8	-,+,-	PYCRL,TIGD5,TSTA3	-477,-12241,7403
chr17:42385263-42385523	chr17	+	42385354	42385572	True	NM_001144826,NM_001143780,NM_001144825,NM_006695	chr17,chr17,chr17,chr17	+,-,+,+	RUNDC3A,SLC25A39,RUNDC3A,RUNDC3A	354,16695,354,354
chr1:49229717-49231652	chr1	+	49229833	49231632	True	NM_024603,NM_001135181	chr1,chr1	-,+	BEND5,SLC5A9	10969,-541527
chr1:160993885-160995132	chr1	+	160994106	160995049	True	NR_033385,NM_016946	chr1,chr1	+,-	KLHDC9,F11R	73101,-2973
chr1:111506231-111506518	chr1	+	111506236	111506482	True	NM_000560,NM_001006945,NM_018372	chr1,chr1,chr1	+,-,-	CD53,C1orf103,C1orf103	-90565,134,134
chr16:77757117-77757647	chr16	+	77757170	77757489	True	NR_024154,NM_001105663,NM_199355	chr16,chr16,chr16	+,+,-	NUDT7,NUDT7,ADAMTS18	-810,-810,-288159
chr10:63480975-63481481	chr10	+	63481083	63481527	True	NM_178505,NM_173554	chr10,chr10	-,+	TMEM26,C10orf107	-267875,-58415
chr10:102747005-102747268	chr10	+	102747123	102747316	True	NM_001163812,NM_001163813,NM_001163814,NM_032112,NM_021830,NM_176794,NM_176793,NM_176792,NM_032429	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,-,+,-,-,-,+	C10orf2,C10orf2,C10orf2,MRPL43,C10orf2,MRPL43,MRPL43,MRPL43,LZTS2	-8,-8,-8,6,-8,6,6,6,9547
chr15:45653102-45654339	chr15	+	45653259	45654362	True	NM_001482,NR_033252	chr15,chr15	-,+	GATM,LOC145663	16668,16535
chr15:65903049-65903267	chr15	+	65903062	65903186	True	NM_030800,NM_001136043,NM_004727	chr15,chr15,chr15	-,-,+	C15orf44,C15orf44,SLC24A1	275,337,11083
chr1:150294229-150295340	chr1	+	150294266	150295321	True	NM_004698,NM_016022	chr1,chr1	+,-	PRPF3,APH1A	-391,-52734
chr21:43424418-43426378	chr21	+	43424690	43426065	True	NR_027273,NM_020727,NM_001098402,NM_001098403	chr21,chr21,chr21,chr21	+,-,-,-	C21orf121,ZNF295,ZNF295,ZNF295	16047,4481,4481,4481
chr17:80659659-80660573	chr17	+	80659809	80660541	True	NM_006822,NM_024619	chr17,chr17	-,+	RAB40B,FN3KRP	-3211,14040
chr14:77732138-77732861	chr14	+	77732176	77732742	True	NM_021257,NR_031661	chr14,chr14	-,+	NGB,MIR1260	4963,158
chr4:152136367-152137068	chr4	+	152136384	152136953	True	NM_183375,NM_001009555	chr4,chr4	+,-	PRSS48,SH3D19	61371,10764
chr11:47210729-47211790	chr11	+	47210825	47211403	True	NM_000107,NM_001184974,NM_001184975,NM_016223	chr11,chr11,chr11,chr11	+,-,-,-	DDB2,PACSIN3,PACSIN3,PACSIN3	25089,-2815,-3393,-2815
chr19:45656810-45657048	chr19	+	45656814	45656908	True	NM_212550,NM_198478	chr19,chr19	+,-	BLOC1S3,NKPD1	25094,6550
chr21:38380107-38380345	chr21	+	38380151	38380393	True	NM_000411,NM_018962	chr21,chr21	-,+	HLCS,DSCR6	-17615,-1339
chr21:35559394-35560094	chr21	+	35559423	35560119	True	NM_001127670,NR_027267,NR_027266	chr21,chr21,chr21	-,+,+	KCNE1,C21orf82,C21orf82	267994,-6497,-6497
chr1:89664243-89664580	chr1	+	89664254	89664630	True	NM_052941,NM_198460	chr1,chr1	-,+	GBP4,GBP6	55,164805
chr11:9482193-9482464	chr11	+	9482296	9482506	True	NM_003442,NR_036539	chr11,chr11	+,-	ZNF143,LOC644656	5,-51
chr16:23312605-23313528	chr16	+	23312822	23313422	True	NM_153603,NM_000336	chr16,chr16	-,+	COG7,SCNN1B	151140,168
chr5:81602637-81604082	chr5	+	81602670	81603881	True	NM_001017971,NM_001025	chr5,chr5	+,-	ATP6AP1L,RPS23	-1559,-28435
chr16:17564830-17565148	chr16	+	17565082	17565148	True	NR_003569,NM_022166	chr16,chr16	+,-	ABCC6P1,XYLT1	1017421,-344
chrX:100335934-100337724	chrX	+	100335954	100337557	True	NM_021637,NM_024917	chrX,chrX	+,-	TMEM35,TRMT2B	-2169,-28849
chr2:152119358-152120099	chr2	+	152119514	152119948	True	NM_007115,NM_198557	chr2,chr2	+,-	TNFAIP6,RBM43	94157,-1125
chr19:7984638-7985080	chr19	+	7984698	7985046	True	NM_206833,NM_001195259,NM_003083,NR_030717	chr19,chr19,chr19,chr19	-,+,+,+	CTXN1,LOC645781,SNAPC2,SNAPC2	6055,-3717,147,820
chr14:36004207-36004477	chr14	+	36004304	36004476	True	NM_032594,NM_020529	chr14,chr14	+,-	INSM2,NFKBIA	-1107,-130344
chr10:102104689-102105013	chr10	+	102104821	102104999	True	NM_016112,NM_005063	chr10,chr10	-,+	PKD2L1,SCD	-14578,1772
chr5:133862878-133863208	chr5	+	133862988	133863148	True	NM_001033503,NM_015288	chr5,chr5	-,+	SAR1B,PHF15	105435,-1241
chr6:150687596-150689421	chr6	+	150687646	150688960	True	NM_001164695,NM_001164694,NM_203395,NM_024518	chr6,chr6,chr6,chr6	+,+,+,-	IYD,IYD,IYD,ULBP3	1067,1067,1067,-297444
chr19:18698316-18698516	chr19	+	18698487	18698549	True	NM_004750,NM_001100419,NM_001100418	chr19,chr19,chr19	-,+,+	CRLF1,C19orf60,C19orf60	19161,945,945
chr1:204040132-204041031	chr1	+	204040153	204040959	True	NM_005686,NR_027902	chr1,chr1	+,-	SOX13,C1orf157	1286,-29761
chr2:176867596-176869070	chr2	+	176867610	176868991	True	NM_030650,NM_000523	chr2,chr2	-,+	KIAA1715,HOXD13	-592,88540
chr16:68297171-68298026	chr16	+	68297190	68297682	True	NM_003983,NM_001076785,NM_024939	chr16,chr16,chr16	+,+,-	SLC7A6,SLC7A6,ESRP2	740,740,-27054
chr8:23560198-23560588	chr8	+	23560215	23560633	True	NM_016612,NM_001136271	chr8,chr8	+,-	SLC25A37,NKX2-6	-173903,3339
chr8:99059314-99060044	chr8	+	99059780	99060051	True	NR_002581,NM_001170806,NM_000989	chr8,chr8,chr8	-,+,-	SNORA72,C8orf47,RPL30	-5335,16698,-1962
chr3:51999686-52000687	chr3	+	51999798	52000618	True	NM_001174100,NM_001146314,NM_033010,NR_027476,NM_015407,NR_037192,NM_033008,NM_032750,NM_020418	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,+,+,-,-,-	PCBP4,ABHD14B,PCBP4,ABHD14B,ABHD14A,ABHD14A-ACY1,PCBP4,ABHD14B,PCBP4	914,8078,-2890,8078,8423,8423,914,8078,882
chr22:46728892-46729892	chr22	+	46728892	46729662	True	NR_024009,NM_018006	chr22,chr22	-,+	CN5H6.4,TRMU	-36335,1635
chr2:86786437-86787109	chr2	+	86786631	86787039	True	NM_016079,NM_001146688,NR_036454,NM_001193517,NM_001005753	chr2,chr2,chr2,chr2,chr2	-,+,-,-,-	VPS24,KDM3A,VPS24,VPS24,VPS24	3631,-118105,3631,3631,3631
chr1:64249484-64250794	chr1	+	64249643	64250819	True	NM_014288,NM_005012	chr1,chr1	-,+	ITGB3BP,ROR1	-260808,-10016
chr6:13575556-13576276	chr6	+	13575555	13576325	True	NM_018988,NM_001193267,NM_031244,NM_012241	chr6,chr6,chr6,chr6	-,+,+,+	GFOD1,SIRT5,SIRT5,SIRT5	-87768,-814,-814,-731
chr1:161368178-161368928	chr1	+	161368886	161368976	True	NM_001013625,NM_003001	chr1,chr1	-,+	C1orf192,SDHC	-31222,-84771
chr7:1782430-1782673	chr7	+	1782504	1782638	True	NM_001134340,NM_001128636	chr7,chr7	-,+	PSMG3,ELFN1	-172836,-33767
chr19:11348352-11348736	chr19	+	11348713	11348773	True	NM_020812,NM_018687	chr19,chr19	-,+	DOCK6,LOC55908	24434,1521
chr19:7598548-7599070	chr19	+	7598658	7599052	True	NM_080662,NM_001166112,NM_001166113,NM_001166111,NM_006702,NM_001166114	chr19,chr19,chr19,chr19,chr19,chr19	-,+,+,+,+,+	PEX11G,PNPLA6,PNPLA6,PNPLA6,PNPLA6,PNPLA6	-44753,75,583,538,-15,1536
chr20:16555985-16556422	chr20	+	16556017	16556406	True	NM_001199865,NM_001199866,NM_024704,NM_003092	chr20,chr20,chr20,chr20	-,-,-,+	KIF16B,KIF16B,KIF16B,SNRPB2	-1938,-1938,-1938,154202
chr1:23748568-23748967	chr1	+	23748577	23748911	True	NR_033691,NM_003196	chr1,chr1	+,-	C1orf213,TCEA3	-52926,2400
chr12:108536746-108538024	chr12	+	108536978	108538021	True	NM_014653,NM_001142345	chr12,chr12	+,-	WSCD2,CMKLR1	-13518,176468
chrX:132351367-132351994	chrX	+	132351382	132351856	True	NM_001101357,NM_016521	chrX,chrX	+,-	CCDC160,TFDP3	1019220,570
chr19:45447238-45447510	chr19	+	45447375	45447503	True	NM_001646,NM_145288,NR_037932,NM_000483	chr19,chr19,chr19,chr19	+,-,+,+	APOC4,ZNF296,APOC4-APOC2,APOC2	-1931,132235,-1931,1735
chr12:124775432-124777061	chr12	+	124775512	124777077	True	NM_001077261,NM_181709	chr12,chr12	-,+	NCOR2,FAM101A	274983,-1853
chr7:561171-561397	chr7	+	561170	561446	True	NM_002607,NR_033963,NM_033023	chr7,chr7,chr7	-,+,-	PDGFA,FLJ44511,PDGFA	-1689,-1193,-1689
chr16:27901438-27902260	chr16	+	27901456	27902180	True	NM_015202,NM_144675	chr16,chr16	+,-	KIAA0556,GSG1L	-340040,-1978
chr17:71229509-71230789	chr17	+	71229553	71230557	True	NM_032837,NM_001100621,NM_001100622,NM_001098832,NM_017941	chr17,chr17,chr17,chr17,chr17	-,+,+,-,+	FAM104A,C17orf80,C17orf80,FAM104A,C17orf80	-1020,-828,-828,-1020,-828
chr7:142630521-142631299	chr7	+	142630572	142631282	True	NM_178829,NM_019841	chr7,chr7	+,-	C7orf34,TRPV5	5320,156
chr17:16691653-16692405	chr17	+	16692207	16692395	True	NR_026810,NR_029392,NR_003190	chr17,chr17,chr17	+,-,+	FAM106C,KRT16P2,LOC162632	-201,43802,-2052
chr17:16691653-16692405	chr17	-	18430074	18430124	False	NR_026809,NR_003554,NM_001040078	chr17,chr17,chr17	-,-,+	FAM106A,LOC220594,LGALS9C	86,-5508,-50026
chr17:16691653-16692405	chr17	+	20320755	20320943	False	NR_023380,NM_001042685	chr17,chr17	+,-	CCDC144C,LGALS9B	-96319,49955
chr19:59057053-59058657	chr19	+	59057053	59058519	True	NM_198426,NM_014453,NM_005762	chr19,chr19,chr19	-,-,+	CHMP2A,CHMP2A,TRIM28	7892,8023,-1270
chr9:37653930-37654993	chr9	+	37653984	37654783	True	NM_014907,NM_001134485	chr9,chr9	+,-	FRMPD1,TOMM5	-2991,-61348
chr4:76439937-76440573	chr4	+	76439968	76440533	True	NM_001009922,NR_037913,NR_037914,NM_001008925,NM_015436,NM_144721	chr4,chr4,chr4,chr4,chr4,chr4	-,-,-,-,-,+	RCHY1,RCHY1,RCHY1,RCHY1,RCHY1,THAP6	-328,-328,-328,-328,-328,-365
chr3:197026199-197026412	chr3	+	197026256	197026427	True	NM_001204386,NM_004087,NR_024388,NM_001098424	chr3,chr3,chr3,chr3	-,-,+,-	DLG1,DLG1,LOC152217,DLG1	-809,-809,-356813,-809
chr1:6054947-6055330	chr1	+	6054984	6055374	True	NM_001199861,NM_015102	chr1,chr1	+,-	KCNAB2,NPHP4	-2677,-2451
chr19:55678165-55678715	chr19	+	55678236	55678721	True	NM_178837,NM_000363,NM_017729	chr19,chr19,chr19	-,-,+	C19orf51,TNNI3,EPS8L1	-218,-9136,-86533
chr4:100799488-100801470	chr4	+	100799671	100801366	True	NM_021970,NM_014395	chr4,chr4	-,+	LAMTOR3,DAPP1	14400,-61742
chr10:90490918-90491289	chr10	+	90491012	90491336	True	NM_001080518,NM_144590	chr10,chr10	+,-	LIPK,ANKRD22	-6763,120446
chr11:117698055-117699088	chr11	+	117698256	117698998	True	NM_001680,NM_001558,NM_021603	chr11,chr11,chr11	-,+,-	FXYD2,IL10RA,FXYD2	-2797,158107,-141
chr1:167527250-167528625	chr1	+	167527304	167528493	True	NM_003851,NM_052862	chr1,chr1	-,+	CREG1,RCSD1	-4248,70980
chr15:51202472-51202803	chr15	+	51202481	51202826	True	NM_032802,NM_007347	chr15,chr15	-,+	SPPL2A,AP4E1	-144571,-1586
chr11:117199373-117199868	chr11	+	117199407	117199814	True	NM_014956,NM_138973	chr11,chr11	+,-	CEP164,BACE1	-895,-12435
chr7:135411917-135412120	chr7	+	135411939	135412065	True	NM_001130929,NM_012450	chr7,chr7	+,-	PL-5283,SLC13A4	-64769,918
chr1:154128079-154128562	chr1	+	154128079	154128434	True	NM_001159484,NM_207308,NM_001127320	chr1,chr1,chr1	-,-,+	NUP210L,NUP210L,UBAP2L	-487,-487,64220
chr5:140229487-140229766	chr5	+	140229508	140229794	True	NM_014005,NM_031860,NM_002109,NM_018911,NM_031859,NM_031856,NM_031857,NM_018901	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,-,+,+,+,+,+	PCDHA9,PCDHA10,HARS,PCDHA8,PCDHA10,PCDHA8,PCDHA9,PCDHA10	-2202,5839,-158537,-8652,5839,-8652,-2202,5839
chr1:237210784-237211506	chr1	+	237210882	237211548	True	NM_001035,NM_018072	chr1,chr1	+,-	RYR2,HEATR1	-5232,-443041
chr6:79577748-79579159	chr6	+	79577771	79578624	True	NM_001010844,NM_017934	chr6,chr6	+,-	IRAK1BP1,PHIP	-640,209437
chr4:38658501-38659523	chr4	+	38658884	38659219	True	NM_016531,NR_026804	chr4,chr4	+,-	KLF3,FLJ13197	6570,7080
chr19:9249132-9250956	chr19	+	9249241	9250890	True	NM_001190791,NM_020933,NM_001001958	chr19,chr19,chr19	+,+,-	ZNF317,ZNF317,OR7G3	165,165,-11615
chr6:39896062-39897107	chr6	+	39896219	39896997	True	NM_001075098,NR_033233,NM_005943,NM_015345	chr6,chr6,chr6,chr6	-,-,-,+	MOCS1,MOCS1,MOCS1,DAAM2	5343,5343,-764,-135498
chr3:127392575-127392852	chr3	+	127392611	127392805	True	NR_033428,NR_033429,NM_172027,NM_001142646	chr3,chr3,chr3,chr3	+,+,+,-	ABTB1,ABTB1,ABTB1,TPRA1	-881,-881,-881,-83043
chr6:10019968-10020254	chr6	+	10020059	10020302	True	NM_001032280,NR_033910	chr6,chr6	-,+	TFAP2A,LOC100130275	392356,392248
chr2:218936503-218936979	chr2	+	218936683	218936899	True	NM_198483,NR_002712	chr2,chr2	+,-	RUFY4,CXCR2P1	-2996,-10670
chr20:48547689-48549332	chr20	+	48548302	48548592	True	NM_006038,NM_018683	chr20,chr20	-,+	SPATA2,RNF114	-16222,4321
chr8:82191904-82192383	chr8	+	82191927	82192421	True	NM_001444,NM_018440,NM_002677	chr8,chr8,chr8	+,-,-	FABP5,PAG1,PMP2	296,-167624,167348
chr12:95465646-95465909	chr12	+	95465813	95465917	True	NM_001127362,NM_017599,NM_001032287,NM_003297	chr12,chr12,chr12,chr12	-,+,-,-	NR2C1,VEZT,NR2C1,NR2C1	1541,145604,1541,1541
chr11:47590536-47591655	chr11	+	47590619	47591457	True	NM_001143984,NR_024222,NM_016506,NM_004551,NM_175732,NM_018095	chr11,chr11,chr11,chr11,chr11,chr11	+,-,-,+,+,-	PTPMT1,KBTBD4,KBTBD4,NDUFS3,PTPMT1,KBTBD4	-3688,9160,9114,9104,-3688,9160
chr7:143888202-143889007	chr7	+	143888214	143888969	True	NM_001003702,NM_198495	chr7,chr7	-,+	ARHGEF35,CTAGE4	3879,-7717
chr7:143888202-143889007	chr7	-	144056251	144056957	False	NM_005435,NM_001080413	chr7,chr7	+,-	ARHGEF5,NOBOX	-3820,43880
chr7:143888202-143889007	chr7	+	143986849	143987555	False	NR_002158,NR_033942,NR_002157	chr7,chr7,chr7	+,-,+	OR2A20P,LOC728377,OR2A9P	8910,-3753,9058
chrX:71459003-71459384	chrX	+	71459035	71459345	True	NM_001170747,NM_017669	chrX,chrX	+,-	PIN4,ERCC6L	-57560,-177
chr12:3949699-3951142	chr12	+	3949753	3951101	True	NM_019854,NM_020367	chr12,chr12	+,-	PRMT8,PARP11	-349387,31557
chr2:107119265-107119613	chr2	+	107119298	107119516	True	NM_001144013,NR_003506	chr2,chr2	-,+	RGPD3,PLGLA	-34497,-116580
chr2:107119265-107119613	chr2	-	87073309	87073527	False	NR_037931,NM_001178100	chr2,chr2	+,-	LOC100286979,CD8B	15420,15570
chr8:30708865-30709711	chr8	+	30709183	30709616	True	NM_031271,NM_005671	chr8,chr8	-,+	TEX15,UBXN8	-2650,-107546
chr11:133936749-133937997	chr11	+	133936994	133938011	True	NM_014987,NM_032801	chr11,chr11	-,+	IGSF9B,JAM3	-110114,808
chr11:117050881-117051343	chr11	+	117050891	117051242	True	NM_001040455,NM_004716	chr11,chr11	+,-	SIDT2,PCSK7	-1003,51628
chr2:70351616-70351823	chr2	+	70351616	70351840	True	NM_006196,NR_024444	chr2,chr2	+,-	PCBP1,LOC100133985	-37082,658
chr1:209600213-209600779	chr1	+	209600256	209600822	True	NR_029622,NM_001104548,NR_036213	chr1,chr1,chr1	+,+,-	MIR205,LOC642587,MIR4260	4655,1345,196083
chr9:35858294-35859285	chr9	+	35858439	35859207	True	NM_001004487,NR_024006	chr9,chr9	-,+	OR13J1,LOC92973	11241,1063
chr11:63742942-63743211	chr11	+	63742958	63743044	True	NM_004074,NM_173587	chr11,chr11	+,-	COX8A,RCOR2	-930,-58642
chr17:53851194-53852175	chr17	+	53851422	53852206	True	NM_001102402,NM_001099640	chr17,chr17	+,-	PCTP,TMEM100	-23013,-41940
chr1:26323055-26324050	chr1	+	26323185	26324097	True	NM_000437,NM_004455	chr1,chr1	-,+	PAFAH2,EXTL1	601,24173
chr2:74691245-74691816	chr2	+	74691451	74691767	True	NM_001146158,NM_053050,NR_037849,NM_006302,NM_012477,NM_031288	chr2,chr2,chr2,chr2,chr2,chr2	-,-,+,-,+,+	MOGS,MRPL53,INO80B-WBP1,MOGS,WBP1,INO80B	820,8225,-9360,820,-5983,-9360
chr7:120969025-120969746	chr7	+	120969032	120969702	True	NM_057168,NM_016087,NM_001040020	chr7,chr7,chr7	+,+,-	WNT16,WNT16,FAM3C	7,-3662,66770
chr2:25388708-25389062	chr2	+	25388800	25388994	True	NM_001035256,NM_000939,NM_014971	chr2,chr2,chr2	-,-,+	POMC,POMC,EFR3B	2615,2615,-123887
chr10:64328335-64328668	chr10	+	64328367	64328427	True	NM_000399,NM_199452	chr10,chr10	-,+	EGR2,ZNF365	247749,-48211
chr10:22265814-22266062	chr10	+	22265858	22266112	True	NM_012071,NM_022365	chr10,chr10	+,-	COMMD3,DNAJC1	339199,26594
chr22:20793067-20793593	chr22	+	20793107	20793629	True	NM_182895,NM_153334,NR_003253	chr22,chr22,chr22	-,-,+	SCARF2,SCARF2,ZNF74	-961,-961,-44678
chr4:16086290-16087322	chr4	+	16086303	16087155	True	NM_001145849,NM_001145848,NM_001145847,NM_001145850,NM_001145851,NM_001145852,NM_006017,NR_027696	chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4	-,-,-,-,-,-,-,+	PROM1,PROM1,PROM1,PROM1,PROM1,PROM1,PROM1,FLJ39653	-8562,-680,-709,-8562,-8562,-8562,-8562,141130
chr14:50317776-50318378	chr14	+	50318008	50318393	True	NM_004713,NM_001663	chr14,chr14	-,+	NEMF,ARF6	1204,41342
chr19:49552596-49553479	chr19	+	49552618	49553363	True	NM_033183,NM_033142,NM_033043	chr19,chr19,chr19	-,-,+	CGB8,CGB7,CGB5	-250,5685,-5567
chr1:110055072-110055962	chr1	+	110055140	110055984	True	NM_182580,NM_020703	chr1,chr1	+,-	CYB561D1,AMIGO1	-18491,-2804
chr17:30413593-30414103	chr17	+	30413926	30413996	True	NR_033412,NR_002222	chr17,chr17	+,-	SH3GL1P1,ARGFXP2	-46623,64644
chr17:30413593-30414103	chr17	+	28997825	28997895	False	NM_015986,NR_024187	chr17,chr17	-,+	CRLF3,SUZ12P	153933,38730
chr1:958624-959126	chr1	+	958862	959118	True	NM_001142467,NM_198576	chr1,chr1	-,+	HES4,AGRN	-23310,-3410
chr4:2938337-2939072	chr4	+	2938423	2939007	True	NR_015453,NM_001120,NM_001146069	chr4,chr4,chr4	+,-,-	C4orf10,MFSD10,MFSD10	-1196,-2459,-1837
chr3:56589323-56591005	chr3	+	56589777	56591036	True	NR_024460,NM_015576,NM_001141947,NM_001012506	chr3,chr3,chr3,chr3	+,-,+,+	CCDC66,ERC2,CCDC66,CCDC66	147,-87386,147,147
chr6:82462039-82462428	chr6	+	82462094	82462388	True	NM_006670,NM_017633	chr6,chr6	+,-	TPBG,FAM46A	610534,90
chrX:40136561-40137440	chrX	+	40136772	40137458	True	NM_001123384,NM_005765	chrX,chrX	-,+	BCOR,ATP6AP2	-100190,302757
chr5:176055353-176056354	chr5	+	176055443	176056177	True	NM_001099408,NM_003085,NR_036239,NM_001001502	chr5,chr5,chr5,chr5	+,-,-,-	EIF4E1B,SNCB,MIR4281,SNCB	1505,1430,374,1430
chr15:75932395-75932737	chr15	+	75932408	75932708	True	NM_153271,NM_018285	chr15,chr15	+,-	SNX33,IMP3	8639,6
chr1:46975029-46976316	chr1	+	46975123	46976199	True	NM_147192,NM_001097611,NM_172225	chr1,chr1,chr1	+,-,+	DMBX1,KNCN,DMBX1	-2506,40738,-2506
chrX:37511952-37512323	chrX	+	37511955	37512339	True	NM_021083,NM_006520	chrX,chrX	+,-	XK,DYNLT3	32793,194600
chr12:96429844-96430727	chr12	+	96430018	96430524	True	NM_000895,NM_152435	chr12,chr12	-,+	LTA4H,AMDHD1	-653,-92998
chr1:147609785-147610310	chr1	+	147610219	147610281	True	NM_001101663,NM_001097616	chr1,chr1	-,+	NBPF24,GPR89C	-138,-184703
chr1:147609785-147610310	chr1	+	146068383	146068445	False	NM_001101663,NM_001097616	chr1,chr1	-,+	NBPF24,GPR89C	-138,-184566
chr1:193094429-193094864	chr1	+	193094491	193094823	True	NM_024529,NM_016066	chr1,chr1	+,-	CDC73,GLRX2	-3454,-19247
chr11:15733012-15734204	chr11	+	15733211	15733929	True	NM_001145819,NM_001042536	chr11,chr11	-,+	SOX6,INSC	690542,-596785
chr14:73493967-73495227	chr14	+	73494069	73494910	True	NM_021239,NM_021260	chr14,chr14	+,-	RBM25,ZFYVE1	30310,-149
chr12:81467277-81468471	chr12	+	81467340	81468282	True	NM_024560,NM_004664	chr12,chr12	+,-	ACSS3,LIN7A	3526,-135646
chr18:47808003-47808275	chr18	+	47808031	47808263	True	NM_001101654,NM_001204136,NM_001204139,NM_015844,NM_015847,NM_015846,NM_001204140,NM_001204141,NM_001204142,NM_001204143,NM_001204151,NM_001039535,NM_015845,NM_002384,NM_014593,NM_001204137,NM_001204138	chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18	-,-,-,-,-,-,-,-,-,-,-,+,-,-,-,-,-	CXXC1,MBD1,MBD1,MBD1,MBD1,MBD1,MBD1,MBD1,MBD1,MBD1,MBD1,SKA1,MBD1,MBD1,CXXC1,MBD1,MBD1	6479,45,45,45,45,45,45,45,45,38,-1644,93128,45,45,6479,45,45
chr5:147205095-147205666	chr5	+	147205332	147205706	True	NM_003122,NM_054023	chr5,chr5	-,+	SPINK1,SCGB3A2	5608,52567
chr5:139943180-139943511	chr5	+	139943246	139943562	True	NM_133172,NM_133173,NM_133174,NM_001035235,NM_080670,NM_006051	chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,+,-	APBB3,APBB3,APBB3,SRA1,SLC35A4,APBB3	679,679,679,-5568,857,679
chr5:35044520-35045963	chr5	+	35044622	35045773	True	NM_194283,NM_031900	chr5,chr5	+,-	DNAJC21,AGXT2	-114975,2517
chr11:67809185-67809834	chr11	+	67809214	67809820	True	NM_030930,NM_006019,NM_006053	chr11,chr11,chr11	-,+,+	UNC93B1,TCIRG1,TCIRG1	-37621,-2803,626
chr11:65190266-65190580	chr11	+	65190535	65190611	True	NR_028272,NM_182556	chr11,chr11	+,-	NEAT1,SLC25A45	-317,-40393
chr16:3354129-3355091	chr16	+	3354225	3354884	True	NM_153028,NM_033208	chr16,chr16	+,-	ZNF75A,TIGD7	548,605
chr1:28831743-28832136	chr1	+	28831790	28831895	True	NR_002909,NR_030725,NR_030726,NR_036473,NM_001048199,NR_003077	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-	SNHG3,RCC1,RCC1,SNHG3,RCC1,SNORD99	559,559,559,559,559,73500
chr5:180629270-180629657	chr5	+	180629467	180629571	True	NM_203295,NM_203294,NM_203297,NM_203296,NM_033342,NM_203293,NM_033549	chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,-,-,+	TRIM7,TRIM7,TRIM7,TRIM7,TRIM7,TRIM7,TRIM41	1829,1829,-1537,1829,2666,2666,20734
chr2:191272532-191272762	chr2	+	191272567	191272638	True	NM_017694,NM_198047	chr2,chr2	+,-	MFSD6,HIBCH	442,-87796
chr14:74815995-74816770	chr14	+	74816150	74816806	True	NR_003256,NM_018228	chr14,chr14	-,+	ABCD4,VRTN	-46383,-1035
chr11:73584172-73584858	chr11	+	73584193	73584889	True	NM_025155,NM_016565	chr11,chr11	+,-	PAAF1,CHCHD8	3143,3051
chr15:65929068-65930465	chr15	+	65929226	65930417	True	NM_001136043,NM_004727	chr15,chr15	-,+	C15orf44,SLC24A1	-25757,-15014
chr8:11562582-11562841	chr8	+	11562720	11562886	True	NM_002052,NM_001908	chr8,chr8	+,-	GATA4,CTSB	-1054,162810
chr2:203880026-203880274	chr2	+	203880074	203880136	True	NM_018256,NM_001114132	chr2,chr2	-,+	WDR12,NBEAL1	-103125,-523
chr3:2141836-2143512	chr3	+	2142010	2143534	True	NM_175607,NM_000564	chr3,chr3	+,-	CNTN4,IL5RA	-1512,1008575
chr13:51642270-51642885	chr13	+	51642322	51642725	True	NR_003923,NM_145019	chr13,chr13	-,+	GUCY1B2,FAM124A	-2029,153781
chr11:94949116-94950670	chr11	+	94949319	94950416	True	NM_144665,NM_015036	chr11,chr11	-,+	SESN3,ENDOD1	13892,-126410
chr2:46766372-46768337	chr2	+	46766423	46768257	True	NM_080653,NM_012249	chr2,chr2	-,+	ATP6V1E2,RHOQ	-19327,1609
chrX:152865623-152866200	chrX	+	152865723	152866179	True	NM_001130997,NM_152274,NM_001395	chrX,chrX,chrX	-,-,+	FAM58A,FAM58A,DUSP9	-1091,-1091,41717
chr11:70506136-70507153	chr11	+	70506215	70507171	True	NM_133266,NM_138565	chr11,chr11	-,+	SHANK2,CTTN	802,-261654
chr9:178004-178443	chr2	-	114195933	114196021	False	NM_172003,NM_013992	chr2,chr2	+,-	CBWD2,PAX8	-716,-159435
chr9:178004-178443	chr9	+	178311	178481	True	NM_001145356,NM_001145355,NM_203447,NM_018491	chr9,chr9,chr9,chr9	-,-,+,-	CBWD1,CBWD1,DOCK8,CBWD1	644,644,36383,644
chr11:71816189-71816735	chr11	+	71816312	71816597	True	NM_014042,NR_026886,NM_017907	chr11,chr11,chr11	-,+,-	C11orf51,LRTOMT,LAMTOR1	7276,-24670,-1879
chr6:168716052-168716529	chr6	+	168716055	168716439	True	NM_214462,NM_001166412	chr6,chr6	-,+	DACT2,SMOC2	4013,125391
chr1:109203835-109204082	chr1	+	109203871	109204115	True	NM_001102592,NM_144584,NM_018061	chr1,chr1,chr1	-,-,+	HENMT1,HENMT1,PRPF38B	-127,83,30816
chrX:72062904-72063216	chrX	+	72062994	72063200	True	NM_001080851,NM_033053	chrX,chrX	+,+	DMRTC1B,DMRTC1	1675,1675
chrX:72062904-72063216	chrX	-	72097297	72097503	False	NM_001080851,NM_033053	chrX,chrX	-,-	DMRTC1B,DMRTC1	-1675,-1675
chr14:102286808-102287515	chr14	+	102286807	102287507	True	NM_178586,NR_031649	chr14,chr14	+,-	PPP2R5C,MIR1247	-10718,-260048
chr3:100050683-100051611	chr3	+	100050721	100051606	True	NM_020202,NM_014820	chr3,chr3	+,-	NIT2,TOMM70A	1955,68669
chr4:108747047-108748996	chr4	+	108747124	108748384	True	NM_001136258,NM_005443	chr4,chr4	+,-	SGMS2,PAPSS1	-1454,-105705
chr19:40467304-40468394	chr19	+	40467526	40468307	True	NM_153001,NM_003890,NM_006503	chr19,chr19,chr19	+,-,+	PSMC4,FCGBP,PSMC4	8765,-26993,8765
chr16:9055549-9055937	chr16	+	9055666	9055938	True	NM_003470,NM_014117	chr16,chr16	-,+	USP7,C16orf72	1453,129598
chr10:98744137-98744715	chr10	+	98744152	98744704	True	NM_003061,NM_015652	chr10,chr10	-,+	SLIT1,C10orf12	201029,-3171
chr16:90113246-90113482	chr16	+	90113361	90113507	True	NR_027336,NR_027335,NR_023348	chr16,chr16,chr16	-,-,+	LOC100130015,LOC100130015,GAS8	734,576,-24404
chr18:12947195-12947398	chr18	+	12947194	12947384	True	NM_031216,NM_001013437,NM_002828	chr18,chr18,chr18	+,+,-	SEH1L,SEH1L,PTPN2	598,598,-62860
chr12:50025825-50026384	chr12	+	50025845	50026413	True	NM_012272,NM_001031698,NM_032130	chr12,chr12,chr12	+,+,-	PRPF40B,PRPF40B,FAM186B	-8493,-1569,-26412
chr9:140114514-140114769	chr9	+	140114669	140114757	True	NM_031297,NM_001190228,NM_199001	chr9,chr9,chr9	-,+,+	RNF208,LOC643596,C9orf169	1068,7260,4886
chr20:62102091-62102540	chr20	+	62102175	62102575	True	NM_172106,NM_172107,NM_024299,NM_172108,NM_172109,NM_004518	chr20,chr20,chr20,chr20,chr20,chr20	-,-,+,-,-,-	KCNQ2,KCNQ2,PPDPF,KCNQ2,KCNQ2,KCNQ2	1468,1468,49557,1468,1468,1468
chr16:5116036-5117846	chr16	+	5116206	5117830	True	NM_001098514,NM_152459,NM_019109	chr16,chr16,chr16	-,-,+	C16orf89,C16orf89,ALG1	-95,-95,3979
chr22:37957923-37958126	chr22	+	37957922	37958044	True	NM_152243,NM_006498	chr22,chr22	+,-	CDC42EP1,LGALS2	-1502,18030
chr22:23924257-23924843	chr22	+	23924614	23924698	True	NM_153615,NM_152855,NM_020070	chr22,chr22,chr22	+,-,-	RGL4,IGLL1,IGLL1	108349,-2119,-2119
chr17:7755651-7756283	chr17	+	7755776	7756136	True	NM_032356,NM_144607,NM_203411	chr17,chr17,chr17	-,+,+	LSMD1,CYB5D1,TMEM88	5086,4927,2247
chr18:52510826-52511728	chr18	+	52510825	52511546	True	NM_004163,NM_001143829	chr18,chr18	+,-	RAB27B,CCDC68	-15036,113790
chr17:55054412-55055210	chr17	+	55054477	55055251	True	NM_021626,NM_004645	chr17,chr17	+,-	SCPEP1,COIL	216,-16066
chr18:29094944-29095156	chr18	+	29094944	29095054	True	NM_004775,NM_001943	chr18,chr18	-,+	B4GALT6,DSG2	169692,-16974
chr7:140774607-140776433	chr7	+	140774727	140776359	True	NM_053035,NM_001195278	chr7,chr7	-,+	MRPS33,LOC100131199	-59946,-746
chr3:52232562-52233044	chr3	+	52232562	52233080	True	NM_017442,NM_199166,NM_000688	chr3,chr3,chr3	-,+,+	TLR9,ALAS1,ALAS1	27149,-497,-469
chr2:30670630-30671875	chr2	+	30670643	30671631	True	NM_182551,NM_001002257,NM_144575	chr2,chr2,chr2	+,+,-	LCLAT1,LCLAT1,CAPN13	-571,-557,358730
chr1:161370001-161370492	chr1	+	161370010	161370401	True	NM_001013625,NM_003001	chr1,chr1	-,+	C1orf192,SDHC	-32346,-85895
chr1:51784466-51785521	chr1	+	51784571	51785292	True	NM_001080494,NM_014372	chr1,chr1	-,+	TTC39A,RNF11	2703,-82677
chr1:158981028-158982473	chr1	+	158981436	158982494	True	NM_004833,NM_005531	chr1,chr1	-,+	AIM2,IFI16	64203,-1809
chr21:34134949-34136016	chr21	+	34135290	34135958	True	NM_013329,NR_024623,NR_024622,NM_016631,NR_027873	chr21,chr21,chr21,chr21,chr21	-,+,+,-,-	GCFC1,C21orf49,C21orf49,GCFC1,GCFC1	8273,8452,8452,8273,8273
chr5:137881587-137882893	chr5	+	137881816	137882812	True	NM_004730,NM_001964	chr5,chr5	-,+	ETF1,EGR1	-2884,-80687
chr1:248004496-248005717	chr1	+	248004581	248005457	True	NM_015431,NM_001001959	chr1,chr1	+,-	TRIM58,OR11L1	15043,-31
chr19:1103337-1103744	chr19	+	1103682	1103782	True	NM_001039847,NM_002085,NM_002695,NM_001039848	chr19,chr19,chr19,chr19	+,+,-,+	GPX4,GPX4,POLR2E,GPX4	153,153,-8291,866
chr19:7746091-7746612	chr19	+	7746287	7746461	True	NM_002002,NM_174894,NM_001042462,NM_001042461,NM_174918	chr19,chr19,chr19,chr19,chr19	-,+,+,+,+	FCER2,TRAPPC5,TRAPPC5,TRAPPC5,C19orf59	20621,-577,-631,-574,-4395
chr11:66137132-66137924	chr11	+	66137157	66137942	True	NM_001532,NM_178864	chr11,chr11	-,+	SLC29A2,NPAS4	1400,50532
chrX:62707322-62707737	chrX	+	62707382	62707757	True	NM_001010888,NR_015353	chrX,chrX	+,-	ZC3H12B,LOC92249	2000857,73171
chr16:766379-766586	chr16	+	766426	766598	True	NM_001031737,NM_024042,NM_023933	chr16,chr16,chr16	-,+,+	CCDC78,METRN,FAM173A	9925,-1304,4559
chr7:75831846-75833289	chr7	+	75832024	75833280	True	NM_012479,NM_001110199,NM_016086	chr7,chr7,chr7	-,+,-	YWHAG,SRRM3,STYXL1	155112,-859,-154703
chr1:54196113-54196754	chr1	+	54196156	54196744	True	NM_147193,NM_000792	chr1,chr1	-,+	GLIS1,DIO1	3183,163116
chr18:34402183-34403514	chr18	+	34402262	34403384	True	NM_020776,NM_015476	chr18,chr18	+,-	KIAA1328,C18orf10	5695,5832
chr6:118969759-118971686	chr6	+	118970190	118971714	True	NM_001042475,NM_206921,NM_002667	chr6,chr6,chr6	-,-,+	C6orf204,C6orf204,PLN	1356,1356,-100799
chr17:48556355-48556581	chr17	+	48556429	48556621	True	NM_018346,NM_001267	chr17,chr17	+,-	RSAD1,CHAD	-290,-10202
chrX:153201436-153201676	chrX	+	153201618	153201700	True	NM_003491,NM_001164741,NM_001666,NM_002910,NM_001146151	chrX,chrX,chrX,chrX,chrX	-,-,-,-,+	NAA10,ARHGAP4,ARHGAP4,RENBP,AVPR2	-1150,-9904,-9904,8582,-31144
chr19:1242845-1243133	chr19	+	1243073	1243157	True	NM_001001975,NM_177401,NM_001687,NM_152769	chr19,chr19,chr19,chr19	+,+,+,-	ATP5D,MIDN,ATP5D,C19orf26	-1379,5394,-1379,-5083
chr17:42399055-42399652	chr17	+	42399094	42399698	True	NM_001143780,NM_001144825,NM_016016	chr17,chr17,chr17	-,+,-	SLC25A39,RUNDC3A,SLC25A39	2569,-13218,2569
chr5:176511414-176511765	chr5	+	176511461	176511546	True	NM_213647,NM_022963,NM_001199298,NM_002011	chr5,chr5,chr5,chr5	+,+,-,+	FGFR4,FGFR4,UIMC1,FGFR4	2374,5004,-77666,2374
chr2:234196718-234197365	chr2	+	234196734	234197356	True	NR_003006,NM_018218	chr2,chr2	+,-	SCARNA6,USP40	-35,276930
chr2:86565007-86565478	chr2	+	86565040	86565294	True	NM_018433,NM_001164730,NM_001164731,NM_001164732,NM_022912	chr2,chr2,chr2,chr2,chr2	+,-,-,-,-	KDM3A,REEP1,REEP1,REEP1,REEP1	102976,-26,-263,-263,-263
chr16:65598037-65599330	chr16	+	65598559	65599369	True	NM_001795,NR_027755	chr16,chr16	+,-	CDH5,LOC283867	801155,10884
chr19:39465015-39465870	chr19	+	39465140	39465790	True	NM_024907,NM_033363	chr19,chr19	-,+	FBXO17,MRPS12	640,-43604
chr7:104006203-104007499	chr7	+	104006480	104007513	True	NM_199000,NM_181747	chr7,chr7	+,-	LHFPL3,ORC5	-37427,-157985
chr6:41116511-41117415	chr6	+	41116518	41117273	True	NR_026938,NM_178174	chr6,chr6	+,-	LOC221442,TREML1	-47796,4848
chr12:6561343-6561570	chr12	+	6561343	6561495	True	NM_001242,NM_018009,NR_015382	chr12,chr12,chr12	+,+,-	CD27,TAPBPL,LOC678655	-7343,-217,-660
chr18:61601866-61602899	chr18	+	61601939	61602786	True	NM_001123366,NR_027245	chr18,chr18	+,-	HMSD,C18orf20	13801,213541
chr4:79860018-79860225	chr4	+	79860163	79860267	True	NM_198892,NM_001040202	chr4,chr4	+,-	BMP2K,PAQR3	-162682,365
chr11:103940739-103942541	chr11	+	103940924	103942509	True	NM_025208,NM_001001711	chr11,chr11	-,+	PDGFD,DDI1	92574,-33670
chr15:28343783-28344148	chr15	+	28343822	28344001	True	NM_000275,NR_033351	chr15,chr15	-,+	OCA2,GOLGA8F	508,279782
chrX:140336653-140337479	chrX	+	140336662	140337254	True	NM_022661,NM_145664	chrX,chrX	-,+	SPANXC,SPANXB2	-16,-239952
chrX:140336653-140337479	chrX	+	142804378	142804452	False	NM_001012989,NM_001009615	chrX,chrX	+,-	UBE2NL,SPANXN2	162720,126
chrX:140336653-140337479	chrX	+	140672944	140672994	False	NM_013453,NM_145662	chrX,chrX	-,-	SPANXA1,SPANXA2	-108,-84
chrX:140336653-140337479	chrX	-	140677700	140677750	False	NM_013453,NM_145662	chrX,chrX	+,+	SPANXA1,SPANXA2	108,84
chr12:68043809-68044056	chr12	+	68043840	68044078	True	NM_003583,NM_000619,NM_006482	chr12,chr12,chr12	+,-,+	DYRK2,IFNG,DYRK2	-1379,509493,-1379
chr7:48887815-48889476	chr7	+	48887963	48889405	True	NR_003595,NM_152782	chr7,chr7	+,-	CDC14C,SUN3	74751,-819247
chr7:48887815-48889476	chr7	-	48962449	48963895	False	NR_003595,NM_152782	chr7,chr7	+,-	CDC14C,SUN3	261,-893733
chr2:210439090-210439965	chr2	+	210439286	210439980	True	NM_152519,NM_002374,NM_031847,NM_031845	chr2,chr2,chr2,chr2	-,+,+,+	C2orf67,MAP2,MAP2,MAP2	596121,4422,4422,4422
chr19:41108511-41109623	chr19	+	41108818	41109594	True	NM_001042544,NM_001042545,NM_004756,NM_003573	chr19,chr19,chr19,chr19	+,+,-,+	LTBP4,LTBP4,NUMBL,LTBP4	-5728,-1592,87012,-9797
chr2:235408136-235409227	chr2	+	235408248	235409053	True	NM_006944,NM_005737	chr2,chr2	+,-	SPP2,ARL4C	-448953,-2555
chr3:56591166-56591641	chr3	+	56591176	56591690	True	NR_024460,NM_015576,NM_001141947,NM_001012506	chr3,chr3,chr3,chr3	+,-,+,+	CCDC66,ERC2,CCDC66,CCDC66	-43,-88785,-43,-43
chr20:34002883-34004688	chr20	+	34003472	34004628	True	NM_018244,NM_199487,NM_007186,NM_001184977	chr20,chr20,chr20,chr20	-,-,+,-	UQCC,UQCC,CEP250,UQCC	-3527,-3527,38594,-3527
chr20:36530343-36531023	chr20	+	36530455	36530957	True	NM_080607,NM_014657	chr20,chr20	+,-	VSTM2L,TTI1	541,130926
chr17:27046713-27047081	chr17	+	27046884	27047016	True	NR_024575,NR_024579,NM_000984,NR_000014,NM_178170,NM_031934,NM_001142624,NR_000013,NR_000009,NR_000010,NM_138463,NM_001144942,NM_152465,NM_001160407,NM_001144943,NM_001142625	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,+,+,-,-,+,+,+,-,-,-,-,-,-	RAB34,RAB34,RPL23A,SNORD42A,NEK8,RAB34,RAB34,SNORD42B,SNORD4B,SNORD4A,TLCD1,RAB34,PROCA1,TLCD1,RAB34,RAB34	-1633,-1633,7,3430,8815,-1976,-1598,551,3682,2583,6264,-1976,-8012,6983,-1598,-1598
chr12:50342629-50344189	chr12	+	50342881	50344107	True	NM_000486,NR_026948	chr12,chr12	+,-	AQP2,LOC283332	416,-37235
chr4:67917-69887	chr4	+	68041	69533	True	NM_001039127,NM_001137608	chr4,chr4	+,-	ZNF718,ZNF732	-14815,220471
chr19:19048403-19048923	chr19	+	19048497	19048731	True	NM_004838,NR_027297,NM_001145722,NM_001145721,NR_033677,NM_001145724	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,+,-	HOMER3,HOMER3,HOMER3,HOMER3,DDX49,HOMER3	3360,1763,2432,2480,-18073,1177
chr5:149669736-149670305	chr5	+	149669752	149670342	True	NM_001008657,NM_171825,NM_015981	chr5,chr5,chr5	+,-,-	TCOF1,CAMK2A,CAMK2A	66859,-349,-349
chr3:15373435-15373672	chr3	+	15373481	15373655	True	NM_033083,NM_001018009,NM_004844	chr3,chr3,chr3	+,-,-	EAF1,SH3BP5,SH3BP5	95408,9296,499
chr4:103998122-103999058	chr4	+	103998309	103999084	True	NM_001008388,NM_178833	chr4,chr4	+,-	CISD2,NHEDC2	-208226,-139
chr2:225446977-225447949	chr2	+	225446992	225447803	True	NM_022915,NM_003590	chr2,chr2	+,-	MRPL44,CUL3	-624928,2364
chr11:60067104-60067809	chr11	+	60067287	60067769	True	NM_022349,NM_024021	chr11,chr11	-,+	MS4A6A,MS4A4A	-116613,-17262
chr17:5974632-5975207	chr17	+	5974728	5975076	True	NM_001033054,NM_015253	chr17,chr17	-,+	AIPL1,WSCD1	363493,-845
chr15:59979862-59980110	chr15	+	59979861	59980159	True	NM_004751,NM_004330	chr15,chr15	+,-	GCNT3,BNIP2	-75931,1533
chr20:9082532-9083762	chr20	+	9082815	9083642	True	NM_001172646,NM_020341	chr20,chr20	+,-	PLCB4,PAK7	-33176,736102
chr14:20810438-20810965	chr14	+	20810551	20810877	True	NM_001042618,NM_005484,NR_002312,NM_182849,NM_021178	chr14,chr14,chr14,chr14,chr14	+,+,-,-,-	PARP2,PARP2,RPPH1,CCNB1IP1,CCNB1IP1	895,895,743,-9094,-9094
chr5:140208075-140209032	chr5	+	140208078	140209064	True	NM_031849,NM_002109,NM_018908,NM_018909,NM_031848,NM_031501,NM_018910,NM_031852	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,-,+,+,+,+,+,+	PCDHA6,HARS,PCDHA5,PCDHA6,PCDHA6,PCDHA5,PCDHA7,PCDHA7	-479,-137107,-6768,-479,-479,-6768,4904,4904
chr5:140208075-140209032	chr5	+	140221996	140222046	False	NM_014005,NM_002109,NM_031856,NM_031857,NM_018910,NM_018911,NM_031852	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,-,+,+,+,+,+	PCDHA9,HARS,PCDHA8,PCDHA9,PCDHA7,PCDHA8,PCDHA7	5310,-151025,-1140,5310,-8078,-1140,-8078
chr11:62360882-62362026	chr11	+	62361141	62361945	True	NM_004739,NM_022830,NM_000327	chr11,chr11,chr11	-,-,+	MTA2,TUT1,ROM1	7408,-2032,18267
chr4:48130073-48130380	chr4	+	48130083	48130407	True	NM_003328,NM_207330	chr4,chr4	-,+	TXK,NIPAL1	5916,-111343
chr9:34833891-34834531	chr9	+	34833998	34834296	True	NR_024481,NM_015297	chr9,chr9	-,+	C9orf144,KIAA1045	4337,123895
chr9:34833891-34834531	chr9	+	34724936	34725234	False	NM_004512,NM_001141917	chr9,chr9	+,-	IL11RA,C9orf144B	-71055,4351
chr10:123357842-123358079	chr10	+	123357872	123358080	True	NM_000141,NM_022970,NM_001144916,NM_001144917,NM_001144914,NM_001144915,NM_206861,NM_001144913,NM_001144918,NM_001144919	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,-,-,+,-,-,-	FGFR2,FGFR2,FGFR2,FGFR2,FGFR2,FGFR2,TACC2,FGFR2,FGFR2,FGFR2	-44,-44,-4100,-44,-4391,-1713,390608,-4391,-44,-44
chr13:57721572-57721810	chr13	+	57721580	57721846	True	NM_001130407,NM_001130406,NM_001130405,NM_001130404,NM_198441,NR_031628	chr13,chr13,chr13,chr13,chr13,chr13	+,+,+,+,+,-	PRR20E,PRR20D,PRR20C,PRR20B,PRR20A,MIR1297	-9,-9,-9,-9,-9,-2835397
chr13:57721572-57721810	chr13	+	57715010	57715276	False	NM_001130407,NM_001130406,NM_001130405,NM_001130404,NM_198441,NR_031628	chr13,chr13,chr13,chr13,chr13,chr13	+,+,+,+,+,-	PRR20E,PRR20D,PRR20C,PRR20B,PRR20A,MIR1297	-9,-9,-9,-9,-9,-2828827
chr13:57721572-57721810	chr13	+	57728153	57728419	False	NM_001130407,NM_001130406,NM_001130405,NM_001130404,NM_198441,NR_031628	chr13,chr13,chr13,chr13,chr13,chr13	+,+,+,+,+,-	PRR20E,PRR20D,PRR20C,PRR20B,PRR20A,MIR1297	-9,-9,-9,-9,-9,-2841970
chr13:57721572-57721810	chr13	+	57734724	57734990	False	NM_001130407,NM_001130406,NM_001130405,NM_001130404,NM_198441,NR_031628	chr13,chr13,chr13,chr13,chr13,chr13	+,+,+,+,+,-	PRR20E,PRR20D,PRR20C,PRR20B,PRR20A,MIR1297	-9,-9,-9,-9,-9,-2848541
chr13:57721572-57721810	chr13	+	57741289	57741555	False	NM_001130407,NM_001130406,NM_001130405,NM_001130404,NM_198441,NM_030932	chr13,chr13,chr13,chr13,chr13,chr13	+,+,+,+,+,-	PRR20E,PRR20D,PRR20C,PRR20B,PRR20A,DIAPH3	-9,-9,-9,-9,-9,2845838
chr12:109249469-109250509	chr12	+	109249516	109250430	True	NM_001917,NM_001161330,NM_018984	chr12,chr12,chr12	+,-,-	DAO,SSH1,SSH1	23426,979,979
chr18:46477559-46477898	chr18	+	46477594	46477789	True	NM_001190823,NM_001190822,NM_001190821,NM_005904,NM_014772	chr18,chr18,chr18,chr18,chr18	-,-,-,-,+	SMAD7,SMAD7,SMAD7,SMAD7,CTIF	-8417,-1891,-513,-513,-412225
chr7:2392676-2393588	chr7	+	2392783	2393565	True	NM_013321,NM_001037283,NM_003751	chr7,chr7,chr7	-,+,+	SNX8,EIF3B,EIF3B	-38684,908,908
chr19:10048878-10049754	chr19	+	10049004	10049651	True	NM_058164,NM_015725	chr19,chr19	-,+	OLFM2,RDH8	-1934,74273
chr10:7756929-7757947	chr10	+	7756969	7757765	True	NM_001001851,NM_002216	chr10,chr10	-,+	ITIH5,ITIH2	-48008,-11784
chr16:12897541-12897775	chr16	+	12897618	12897746	True	NM_001145205,NM_018340,NM_001099455	chr16,chr16,chr16	+,-,-	SHISA9,CPPED1,CPPED1	97730,48,48
chr6:143833204-143833415	chr6	+	143833238	143833416	True	NM_032020,NM_003630	chr6,chr6	-,+	FUCA2,PEX3	-218,-61371
chr12:12934754-12935921	chr12	+	12934794	12935700	True	NM_030817,NM_006143	chr12,chr12	+,-	APOLD1,GPR19	2840,-85673
chr7:141437405-141437739	chr7	+	141437446	141437579	True	NM_003143,NR_015392	chr7,chr7	+,-	SSBP1,FLJ40852	596,504
chr8:41506152-41506732	chr8	+	41506158	41506538	True	NM_152568,NM_178819	chr8,chr8	-,+	NKX6-3,AGPAT6	-1280,-70502
chr15:25297885-25299466	chr15	+	25298029	25299247	True	NR_003317,NR_003316,NR_003320,NR_003324,NR_003322,NR_003319,NR_003318,NM_130838	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,-	SNORD116-2,SNORD116-1,SNORD116-5,SNORD116-9,SNORD116-7,SNORD116-4,SNORD116-3,UBE3A	108,-1457,8231,2758,8231,5436,2758,351456
chr1:43799417-43801038	chr1	+	43799441	43800921	True	NM_022821,NM_005373	chr1,chr1	-,+	ELOVL1,MPL	32828,2553
chr2:163200917-163202196	chr2	+	163201062	163202221	True	NM_022168,NM_012198	chr2,chr2	-,+	IFIH1,GCA	-26023,-530
chr15:53093403-53094095	chr15	+	53093408	53093694	True	NM_004498,NM_002748	chr15,chr15	-,+	ONECUT1,MAPK6	-11199,-782048
chr19:17531114-17531472	chr19	+	17531154	17531486	True	NM_004335,NM_138401	chr19,chr19	-,+	BST2,FAM125A	-14770,-293
chr17:53342591-53342983	chr17	+	53342607	53342922	True	NM_002126,NM_012329	chr17,chr17	+,-	HLF,MMD	-337,156469
chr3:140659895-140660345	chr3	+	140659895	140660372	True	NM_001104647,NM_001178140,NM_018155	chr3,chr3,chr3	+,-,+	SLC25A36,TFDP2,SLC25A36	289,1058907,289
chr20:44988576-44989346	chr20	+	44988716	44989024	True	NM_152854,NM_173073,NM_015945,NM_173179	chr20,chr20,chr20,chr20	+,-,-,-	CD40,SLC35C2,SLC35C2,SLC35C2	-241861,4090,4090,4090
chr14:51963600-51965481	chr14	+	51963718	51965446	True	NM_001042481,NR_037676	chr14,chr14	+,-	FRMD6,C14orf82	-7921,153069
chr1:103574095-103574401	chr1	+	103574142	103574274	True	NM_080629,NM_001854,NM_080630,NM_017619,NM_001190709	chr1,chr1,chr1,chr1,chr1	-,-,-,+,-	COL11A1,COL11A1,COL11A1,RNPC3,COL11A1	-90,-90,-90,494303,-90
chr2:55921062-55921983	chr2	+	55921086	55921608	True	NM_080667,NM_033109	chr2,chr2	+,-	CCDC104,PNPT1	-174397,-75
chr20:60762078-60763109	chr20	+	60762084	60763058	True	NM_007232,NM_015666	chr20,chr20	-,+	HRH3,GTPBP5	32315,-4054
chr3:183992477-183993440	chr3	+	183992668	183993411	True	NM_033259,NM_001100121,NM_001100120,NM_001037324	chr3,chr3,chr3,chr3	-,+,+,+	CAMK2N2,ECE2,ECE2,ECE2	-13417,387,387,387
chr1:36864890-36865579	chr1	+	36864889	36865340	True	NM_032881,NM_024676	chr1,chr1	-,+	LSM10,SH3D21	-1396,-92232
chr16:5081483-5081891	chr16	+	5081618	5081826	True	NM_019109,NM_016256	chr16,chr16	+,-	ALG1,NAGPA	39983,2166
chr13:53425115-53425448	chr13	+	53425193	53425317	True	NR_031582,NM_032949,NM_002590	chr13,chr13,chr13	+,-,-	MIR759,PCDH8,PCDH8	-41061,-2418,-2418
chr15:53080745-53080967	chr15	+	53080767	53081007	True	NM_004498,NM_002748	chr15,chr15	-,+	ONECUT1,MAPK6	1252,-769407
chr17:8278178-8278396	chr17	+	8278278	8278344	True	NM_213597,NM_000987,NM_153007	chr17,chr17,chr17	-,-,+	KRBA2,RPL26,ODF4	-3420,8277,-35148
chr3:13975901-13976524	chr3	+	13975914	13976486	True	NR_036481,NM_004625,NR_002223	chr3,chr3,chr3	+,-,+	LOC100132526,WNT7A,TPRXL	-1412,-54296,2320
chr22:36597914-36598493	chr22	+	36597913	36598497	True	NM_030643,NM_001136540,NM_145660	chr22,chr22,chr22	-,+,-	APOL4,APOL1,APOL4	2432,50619,2432
chr1:151012091-151013192	chr1	+	151012104	151012657	True	NM_138278,NM_017860,NM_001159642,NM_001038707	chr1,chr1,chr1,chr1	+,+,+,-	BNIPL,C1orf56,BNIPL,CDC42SE1	-3133,7601,-3133,19527
chr11:14614224-14615119	chr11	+	14614402	14615076	True	NM_148976,NM_000922	chr11,chr11	-,+	PSMA1,PDE3B	50154,50192
chr7:19185265-19185666	chr7	+	19185357	19185627	True	NM_152898,NM_001204148	chr7,chr7	-,+	FERD3L,HDAC9	-313,-636513
chr1:51704064-51704441	chr1	+	51704093	51704387	True	NM_001080494,NM_014372	chr1,chr1	-,+	TTC39A,RNF11	83611,-2199
chr17:40574601-40574999	chr17	+	40574615	40574999	True	NM_001130020,NM_012232	chr17,chr17	+,-	ATP6V0A1,PTRF	35862,389
chr12:100529338-100530680	chr12	+	100529338	100530523	True	NR_031728,NM_015054,NM_001006947	chr12,chr12,chr12	+,-,-	MIR1827,UHRF1BP1L,UHRF1BP1L	53138,6180,6180
chr14:105302635-105302856	chr14	+	105302785	105302869	True	NR_024396,NM_001014432	chr14,chr14	+,-	MGC23270,AKT1	-15298,-40705
chr5:139959958-139961226	chr5	+	139960038	139961115	True	NM_080670,NM_133174	chr5,chr5	+,-	SLC35A4,APBB3	-15679,-15849
chr9:139334456-139334695	chr9	+	139334511	139334737	True	NM_019892,NM_015160	chr9,chr9	-,+	INPP5E,PMPCA	-255,-29446
chr17:38183709-38184524	chr17	+	38183763	38184311	True	NR_003692,NM_001079518	chr17,chr17	+,-	SNORD124,MED24	-19,26628
chr16:28875592-28876826	chr16	+	28875800	28876762	True	NM_001145812,NM_001145797,NM_001145796,NM_001145795,NM_015503,NM_003321	chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,-	SH2B1,SH2B1,SH2B1,SH2B1,SH2B1,TUFM	-555,-773,-773,-773,-537,-18071
chr21:46021418-46021917	chr21	+	46021634	46021838	True	NM_198689,NM_198688	chr21,chr21	+,-	KRTAP10-7,KRTAP10-6	-1188,-9248
chr12:6421466-6422606	chr12	+	6421773	6422449	True	NM_001144857,NM_001144856,NM_001065,NM_018173	chr12,chr12,chr12,chr12	+,+,-,+	PLEKHG6,PLEKHG6,TNFRSF1A,PLEKHG6	-7,-1725,28884,-2222
chrY:21153426-21154657	chrY	+	21153528	21154515	True	NR_002159,NM_013230	chrY,chrY	+,-	TTTY9B,CD24	-261819,241
chr19:29417539-29417984	chr19	+	29417658	29417969	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	38068,286228
chr6:138424582-138425098	chr6	+	138424872	138425144	True	NM_022121,NM_020340	chr6,chr6	-,+	PERP,KIAA1244	3566,57908
chr7:76040234-76040640	chr7	+	76040337	76040603	True	NM_080744,NM_007155,NM_001110354	chr7,chr7,chr7	-,+,+	SRCRB4D,ZP3,ZP3	-1325,-13547,13668
chr20:62688038-62688389	chr20	+	62688072	62688342	True	NM_198723,NM_018419,NM_003195	chr20,chr20,chr20	+,-,+	TCEA2,SOX18,TCEA2	96,-7093,5667
chr1:89458749-89460266	chr1	+	89458922	89460270	True	NM_019610,NM_001008662,NM_001008661,NM_001162536,NM_006256	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	RBMXL1,CCBL2,CCBL2,RBMXL1,PKN2	-279,-279,-279,-279,-309051
chr15:89927778-89929305	chr15	+	89927997	89929302	True	NR_015411,NM_002693	chr15,chr15	+,-	LOC254559,POLG	-6775,-49971
chr19:50170447-50171443	chr19	+	50170580	50171061	True	NM_001040668,NR_033397,NM_138639,NM_001571,NM_001197128,NM_001197127,NM_001197126,NM_001197125,NM_001197124,NM_001197123,NM_001197122,NM_001536,NM_198318	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,-,-,-,-,-,-,-,-,+,+	BCL2L12,PRMT1,BCL2L12,IRF3,IRF3,IRF3,IRF3,IRF3,IRF3,IRF3,IRF3,PRMT1,PRMT1	-2232,9434,-2232,-1448,-1448,-1448,-1448,-1448,-1448,-1448,-1448,9434,9434
chr15:78523386-78525117	chr15	+	78524264	78524955	True	NM_015162,NM_018602,NM_001199377	chr15,chr15,chr15	-,+,-	ACSBG1,DNAJA4,ACSBG1	2144,31531,2144
chr6:132890579-132890780	chr6	+	132890578	132890824	True	NM_175067,NM_003967	chr6,chr6	+,-	TAAR6,TAAR5	636,20103
chr11:57001824-57002728	chr11	+	57001965	57002675	True	NM_001005210,NM_005161,NR_027991	chr11,chr11,chr11	+,-,-	LRRC55,APLNR,APLNR	-52795,2302,2302
chr15:22546272-22546505	chr15	+	22546358	22546454	True	NR_027407,NR_033735	chr15,chr15	-,+	GOLGA8DP,REREP3	169324,110
chr12:31079081-31079360	chr12	+	31079090	31079218	True	NM_032156,NM_001080509	chr12,chr12	-,+	CAPRIN2,TSPAN11	-171642,619
chr20:42086711-42086978	chr20	+	42086717	42086889	True	NR_034009,NM_133170,NM_006275	chr20,chr20,chr20	+,-,+	SRSF6,PTPRT,SRSF6	-264,-268160,-264
chr9:136942975-136944574	chr9	+	136943350	136944557	True	NM_007371,NR_015427	chr9,chr9	-,+	BRD3,NCRNA00094	-10209,-52840
chr14:89066675-89067007	chr14	+	89066676	89066779	True	NM_207662,NM_007039	chr14,chr14	+,-	ZC3H14,PTPN21	-5997,-45553
chr10:128993243-128993510	chr10	+	128993251	128993487	True	NM_001030013,NM_001039762	chr10,chr10	+,-	NPS,FAM196A	354125,985
chr5:147162876-147163576	chr5	+	147162896	147163590	True	NM_014790,NM_054023	chr5,chr5	-,+	JAKMIP2,SCGB3A2	-644,94683
chr5:147162876-147163576	chr5	-	144774816	144774866	False	NM_182960,NM_152550	chr5,chr5	-,+	PRELID2,SH3RF2	440051,541259
chr22:29223337-29225063	chr22	+	29223943	29224173	True	NM_005080,NM_173510	chr22,chr22	-,+	XBP1,CCDC117	-27383,-55332
chr9:88354840-88355523	chr9	+	88355010	88355378	True	NR_029410,NM_015239	chr9,chr9	+,-	LOC389765,AGTPBP1	65538,1628
chr3:52092517-52093167	chr3	+	52092605	52093073	True	NM_001198898,NR_027331,NM_001947	chr3,chr3,chr3	+,-,-	ACY1,C3orf74,DUSP7	-75356,6105,-2144
chr3:49943663-49944685	chr3	+	49943668	49944395	True	NM_001167582,NM_002447	chr3,chr3	+,-	RBM6,MST1R	33081,-2362
chr2:73146575-73147220	chr2	+	73146622	73147050	True	NM_015189,NM_004097	chr2,chr2	-,+	EXOC6B,EMX1	-93445,-2069
chr5:145718096-145718366	chr5	+	145718203	145718331	True	NM_020117,NM_002700	chr5,chr5	-,+	LARS,POU4F3	-155909,255
chr6:70570115-70571796	chr6	+	70570204	70571839	True	NM_018368,NM_001858	chr6,chr6	-,+	LMBRD1,COL19A1	-63155,4608
chr5:118404436-118405663	chr5	+	118404643	118405107	True	NM_173666,NM_005509	chr5,chr5	-,+	DTWD2,DMXL1	-80403,1976
chr1:166842225-166843432	chr1	+	166842559	166843193	True	NM_017542,NM_053053	chr1,chr1	+,-	POGK,TADA1	-33893,2511
chr6:42847337-42847734	chr6	+	42847340	42847774	True	NM_001008739,NM_198486	chr6,chr6	-,+	C6orf226,RPL7L1	10830,44
chr15:43212872-43213182	chr15	+	43212958	43213230	True	NM_024956,NM_173500	chr15,chr15	+,-	TMEM62,TTBK2	212491,49
chr2:191299451-191300548	chr2	+	191299647	191300507	True	NM_017694,NM_001142645	chr2,chr2	+,-	MFSD6,TMEM194B	-26620,99011
chr16:1127722-1128024	chr16	+	1127764	1127826	True	NM_001172560,NM_001053,NR_027242	chr16,chr16,chr16	+,+,-	SSTR5,SSTR5,LOC146336	-5059,954,955
chr9:90386266-90386510	chr9	+	90386274	90386458	True	NR_027917,NM_001039803	chr9,chr9	+,-	CTSL3,CDK20	1371,203287
chrX:153062426-153062692	chrX	+	153062596	153062702	True	NM_001204526,NM_001204527,NM_174869,NR_037927,NM_004135,NM_006280	chrX,chrX,chrX,chrX,chrX,chrX	+,+,-,+,-,+	SSR4,SSR4,IDH3G,SSR4,IDH3G,SSR4	-2743,-3017,-2629,-2743,-2629,-2628
chr15:52485501-52486233	chr15	+	52485677	52486249	True	NM_016194,NM_002748	chr15,chr15	-,+	GNB5,MAPK6	-2112,-174329
chr1:66999402-66999707	chr1	+	66999522	66999594	True	NM_005478,NM_032291	chr1,chr1	-,+	INSL5,SGIP1	267398,230
chr1:8000861-8001511	chr1	+	8001088	8001390	True	NM_001561,NM_001123377	chr1,chr1	-,+	TNFRSF9,PARK7	1887,20323
chr6:22568623-22569243	chr6	+	22568625	22569187	True	NM_001163558,NM_138574	chr6,chr6	-,+	PRL,HDGFL1	-265543,490
chr2:68877924-68878349	chr2	+	68877949	68878180	True	NM_001024680,NM_138964	chr2,chr2	-,+	FBXO48,PROKR1	-183559,-5049
chr18:29268735-29269427	chr18	+	29268788	29269418	True	NM_004775,NM_000371	chr18,chr18	-,+	B4GALT6,TTR	-4102,-97110
chr11:122890761-122892100	chr11	+	122890993	122892021	True	NR_027288,NM_001098169	chr11,chr11	+,-	LOC341056,BSX	-2770,-38614
chr9:72454433-72455173	chr9	+	72454625	72455197	True	NM_001099666,NM_001010940	chr9,chr9	-,+	PTAR1,C9orf135	-79749,-18956
chr19:56516382-56517627	chr19	+	56517031	56517411	True	NM_176810,NM_153447	chr19,chr19	-,+	NLRP13,NLRP5	-73329,-5990
chrX:100306750-100306971	chrX	+	100306750	100306836	True	NM_021637,NM_024917,NM_001167972,NM_001167971,NM_001167970	chrX,chrX,chrX,chrX,chrX	+,-,-,-,-	TMEM35,TRMT2B,TRMT2B,TRMT2B,TRMT2B	26999,319,319,319,319
chr18:34380946-34382636	chr18	+	34380945	34382594	True	NM_020776,NM_015476	chr18,chr18	+,-	KIAA1328,C18orf10	26485,26625
chr12:58152914-58153961	chr12	+	58153081	58153969	True	NM_000785,NM_138396,NM_000075	chr12,chr12,chr12	-,+,-	CYP27B1,MARCH9,CDK4	7057,-4232,-6917
chr5:1292902-1293130	chr5	+	1292954	1293110	True	NM_182632,NM_001193376,NM_198253	chr5,chr5,chr5	+,-,-	SLC6A18,TERT,TERT	-67535,2102,2102
chr7:148724022-148724247	chr7	+	148724021	148724221	True	NM_004911,NM_020781	chr7,chr7	-,+	PDIA4,ZNF398	1611,99286
chr6:130031831-130033689	chr6	+	130031933	130033269	True	NM_001007102,NM_033515	chr6,chr6	+,-	L3MBTL3,ARHGAP18	306458,-563
chr2:233897705-233898725	chr2	+	233897806	233898743	True	NM_005383,NM_019850	chr2,chr2	+,-	NEU2,NGEF	-475,-19855
chr17:34959061-34960035	chr17	+	34959224	34959703	True	NM_024864,NM_001033580	chr17,chr17	+,-	MRM1,MYO19	-1255,-67919
chr10:46614187-46616070	chr10	+	46614559	46615754	True	NR_027632,NM_001042357,NM_001042389	chr10,chr10,chr10	+,-,-	FAM35B,PTPN20B,PTPN20A	281886,4356,4356
chr10:46614187-46616070	chr10	+	48801486	48802681	False	NM_001042357,NM_153034,NM_001042389	chr10,chr10,chr10	-,+,-	PTPN20B,ZNF488,PTPN20A	4356,-446455,4356
chr10:46614187-46616070	chr10	+	49321999	49323194	False	NR_033172,NM_002750	chr10,chr10	-,+	FRMPD2P1,MAPK8	60098,286492
chr5:118600448-118601708	chr5	+	118600459	118601562	True	NM_173666,NM_001077654	chr5,chr5	-,+	DTWD2,TNFAIP8	-276219,2855
chr7:39986380-39988177	chr7	+	39986441	39987890	True	NM_031267,NM_138701,NM_003718	chr7,chr7,chr7	+,-,+	CDK13,C7orf11,CDK13	2068,186415,2068
chr15:21364139-21364401	chr15	+	21364188	21364322	True	NR_027411,NR_028506	chr15,chr15	+,-	GOLGA8C,NF1P1	-596570,-229563
chr15:21364139-21364401	chr15	+	20357591	20357725	False	NR_036432,NR_027411	chr15,chr15	-,+	HERC2P3,GOLGA8C	353762,409948
chr6:168719839-168720049	chr6	+	168719838	168720036	True	NM_214462,NM_001166412	chr6,chr6	-,+	DACT2,SMOC2	416,121794
chr4:152370046-152372020	chr4	+	152370196	152371810	True	NM_001128923,NM_001109977	chr4,chr4	-,+	SH3D19,FAM160A1	-222536,-39857
chr1:24509332-24510310	chr1	+	24509486	24510205	True	NM_170743,NM_173064,NM_173065,NR_027087	chr1,chr1,chr1,chr1	-,-,-,+	IL28RA,IL28RA,IL28RA,LOC284632	3610,3610,3610,16524
chr2:238395148-238395730	chr2	+	238395426	238395680	True	NM_001042467,NM_024101,NM_057165	chr2,chr2,chr2	+,+,-	MLPH,MLPH,COL6A3	197,197,-72576
chr11:15141536-15141845	chr11	+	15141571	15141891	True	NM_001031853,NM_001741,NM_001042536	chr11,chr11,chr11	+,-,+	INSC,CALCA,INSC	-7652,-147739,-5138
chr1:178057028-178058643	chr1	+	178057175	178058677	True	NR_027982,NM_170692	chr1,chr1	-,+	LOC100302401,RASAL2	4501,4186
chr11:63439301-63439588	chr11	+	63439339	63439587	True	NM_201428,NM_201429,NM_006054,NM_201430,NM_015459	chr11,chr11,chr11,chr11,chr11	+,+,+,+,-	RTN3,RTN3,RTN3,RTN3,ATL3	9334,9334,9334,9334,-256
chr14:53418512-53419378	chr14	+	53418625	53419386	True	NM_001134999,NM_006832,NM_001135000,NM_145251	chr14,chr14,chr14,chr14	-,-,-,+	FERMT2,FERMT2,FERMT2,STYX	-810,-810,-810,-221793
chr4:49307127-49308148	chr4	+	49307565	49307615	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-319351,-398750
chr4:49307127-49308148	chr4	-	49312094	49312144	False	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-323880,-403279
chr14:95109269-95109602	chr14	+	95109292	95109390	True	NM_173850,NR_015340	chr14,chr14	-,+	SERPINA12,SERPINA13	-125111,-2295
chr9:128004977-128005224	chr9	+	128005171	128005233	True	NM_005347,NM_015635	chr9,chr9	-,+	HSPA5,GAPVD1	-1505,18877
chr4:141674459-141675487	chr4	+	141674743	141675490	True	NM_015130,NM_153702	chr4,chr4	-,+	TBC1D9,ELMOD2	2032,-229488
chr19:22815339-22816486	chr19	+	22815473	22816024	True	NM_020855,NM_001080409	chr19,chr19	+,-	ZNF492,ZNF99	1101,136810
chr3:186559457-186560384	chr3	+	186559482	186560302	True	NM_004797,NM_181573,NM_001177800	chr3,chr3,chr3	+,-,+	ADIPOQ,RFC4,ADIPOQ	160,-34998,160
chr5:23513910-23515163	chr5	+	23514065	23514909	True	NM_020227,NM_004061	chr5,chr5	+,-	PRDM9,CDH12	-6399,-660334
chr1:11160490-11160742	chr1	+	11160511	11160573	True	NM_007375,NM_002685,NM_001001998	chr1,chr1,chr1	+,-,-	TARDBP,EXOSC10,EXOSC10	-87886,-573,-573
chrX:71500509-71500900	chrX	+	71500702	71500840	True	NM_001170747,NM_001007	chrX,chrX	+,-	PIN4,RPS4X	-99227,-3561
chr8:145732223-145733643	chr8	+	145732337	145733675	True	NM_005309,NM_004260,NM_014665,NM_138431	chr8,chr8,chr8,chr8	+,-,+,+	GPT,RECQL4,LRRC14,MFSD3	-2923,9585,9687,876
chr12:40479882-40480115	chr12	+	40479951	40480069	True	NM_052885,NM_198578	chr12,chr12	-,+	SLC2A13,LRRK2	19642,138743
chr3:161085183-161086035	chr3	+	161085196	161085992	True	NM_001080440,NM_001040100	chr3,chr3	+,-	OTOL1,C3orf57	128603,3939
chr1:59093240-59094274	chr1	+	59093279	59094249	True	NM_002353,NR_034014	chr1,chr1	-,+	TACSTD2,LOC100131060	-50113,156573
chr14:68284366-68285310	chr14	+	68284498	68284791	True	NM_133510,NM_015346,NM_133509,NM_002877	chr14,chr14,chr14,chr14	+,-,+,+	RAD51L1,ZFYVE26,RAD51L1,RAD51L1	1704,-1192,1704,1704
chr11:7535711-7537470	chr11	+	7535807	7537415	True	NM_003621,NM_016229	chr11,chr11	+,-	PPFIBP2,CYB5R2	-857,157456
chr4:39459295-39459529	chr4	+	39459329	39459565	True	NM_001024921,NM_194451,NM_000661,NM_006859	chr4,chr4,chr4,chr4	-,+,-,+	RPL9,LIAS,RPL9,LIAS	698,1099,1059,1099
chr8:22104049-22106006	chr8	+	22104295	22105961	True	NR_029714,NM_001722	chr8,chr8	-,+	MIR320A,POLR3D	-1739,-1727
chr10:30632225-30632627	chr10	+	30632404	30632497	True	NM_018109,NM_005204	chr10,chr10	-,+	MTPAP,MAP3K8	5827,90368
chr14:55704126-55705665	chr14	+	55704521	55705512	True	NM_017943,NM_014750	chr14,chr14	+,-	FBXO34,DLGAP5	32508,-46125
chr19:55258834-55260232	chr19	+	55258883	55259970	True	NM_001127255,NM_015868	chr19,chr19	-,+	NLRP7,KIR2DL3	198953,-8960
chrX:46803614-46804300	chrX	+	46803686	46804313	True	NM_032591,NM_014735	chrX,chrX	-,+	SLC9A7,PHF16	-185214,-31878
chr13:20359154-20359987	chr13	+	20359392	20359855	True	NM_001042414,NM_017520,NR_003272	chr13,chr13,chr13	-,+,-	PSPC1,MPHOSPH8,PSPC1	-2309,-151655,-2309
chr7:99971886-99973276	chr7	+	99972073	99973061	True	NM_178273,NR_003613,NM_178272,NM_013439	chr7,chr7,chr7,chr7	+,-,+,+	PILRA,PMS2P1,PILRA,PILRA	-1056,-38143,-1056,-1056
chr1:233082957-233084694	chr1	+	233083137	233084655	True	NM_032324,NM_014801	chr1,chr1	+,-	NTPCR,PCNXL2	1714,346868
chr14:105940332-105940587	chr14	+	105940448	105940548	True	NM_001312,NM_001519	chr14,chr14	+,-	CRIP2,BRF1	582,-173119
chr17:43596428-43596642	chr17	+	43596467	43596691	True	NR_002940,NR_037772	chr17,chr17	-,+	LRRC37A4,CRHR1	1248,101018
chr17:43596428-43596642	chr17	+	43592474	43592698	False	NR_002940,NR_037772	chr17,chr17	-,+	LRRC37A4,CRHR1	5241,105011
chr17:43596428-43596642	chr17	-	45126614	45126838	False	NM_203400,NM_054022	chr17,chr17	-,+	RPRML,GOSR2	-70000,-126179
chr2:224587087-224588325	chr2	+	224587090	224588158	True	NM_022915,NM_001039569	chr2,chr2	+,-	MRPL44,AP1S3	233962,114223
chr5:110286189-110286615	chr5	+	110286286	110286539	True	NM_033035,NM_001039763	chr5,chr5	+,-	TSLP,TMEM232	120850,-223836
chr17:80008543-80008951	chr17	+	80008546	80008872	True	NM_004127,NM_002917,NM_212492	chr17,chr17,chr17	+,-,+	GPS1,RFNG,GPS1	890,828,890
chr22:25387077-25387582	chr22	+	25387344	25387414	True	NM_001001663,NM_001145206	chr22,chr22	-,+	TMEM211,KIAA1671	-52030,36526
chr15:90726943-90727203	chr15	+	90727030	90727248	True	NM_020210,NM_006384	chr15,chr15	+,-	SEMA4B,CIB1	903,50081
chr11:64730453-64731232	chr11	+	64730624	64731038	True	NM_001037225,NM_006244	chr11,chr11	-,+	C11orf85,PPP2R5B	-3015,-38539
chr15:57595608-57596363	chr15	+	57595777	57596402	True	NR_015419,NR_024433	chr15,chr15	-,+	LOC145783,LOC283663	-385080,-3265
chr13:27337125-27338965	chr13	+	27337206	27338724	True	NM_005288,NM_006646	chr13,chr13	-,+	GPR12,WASF3	-2284,-205424
chr13:31001863-31003127	chr13	+	31002001	31003133	True	NM_005800,NM_002128	chr13,chr13	+,-	USPL1,HMGB1	188696,37004
chr5:78366228-78367809	chr5	+	78366265	78367764	True	NM_001178005,NM_013391,NM_017614	chr5,chr5,chr5	+,-,+	BHMT2,DMGDH,BHMT2	-769,-816,-769
chr6:13488262-13488527	chr6	+	13488262	13488514	True	NM_033069,NM_018988,NM_031244	chr6,chr6,chr6	-,-,+	C6orf114,GFOD1,SIRT5	-1847,-475,86277
chr11:107462099-107462318	chr11	+	107462099	107462243	True	NM_138775,NR_028328,NM_018712,NM_001130037	chr11,chr11,chr11,chr11	-,+,+,+	ALKBH8,LOC643923,ELMOD1,ELMOD1	-25638,227,-333,-333
chr7:143011655-143012471	chr7	+	143012004	143012450	True	NM_000083,NM_014690	chr7,chr7	+,-	CLCN1,FAM131B	768,46773
chr19:4183951-4184157	chr19	+	4184027	4184117	True	NM_016539,NM_133475,NM_001193285	chr19,chr19,chr19	-,+,-	SIRT6,ANKRD24,SIRT6	-1431,-727,-1431
chr8:21914784-21915544	chr8	+	21914909	21915541	True	NM_001978,NM_024815,NM_001114135,NM_001114137,NM_001114136,NM_001114139,NM_001114138	chr8,chr8,chr8,chr8,chr8,chr8,chr8	+,-,+,+,+,+,+	EPB49,NUDT18,EPB49,EPB49,EPB49,EPB49,EPB49	1144,51441,-22,-3879,-2632,-2632,1144
chr14:99947465-99947696	chr14	+	99947471	99947743	True	NM_032233,NM_001099402,NM_199123	chr14,chr14,chr14	-,+,-	SETD3,CCNK,SETD3	-245,-5,-245
chr19:11705953-11706471	chr19	+	11706017	11706085	True	NM_001111036,NM_145295	chr19,chr19	-,+	ACP5,ZNF627	-16216,2149
chr4:56718876-56719805	chr4	+	56718881	56719837	True	NM_178237,NM_006681,NM_001024924,NM_018261	chr4,chr4,chr4,chr4	+,-,+,+	EXOC1,NMU,EXOC1,EXOC1	-22,-216416,-22,-22
chr3:128215449-128215691	chr3	+	128215482	128215618	True	NM_001145662,NM_001145661,NR_026954,NM_032638	chr3,chr3,chr3,chr3	-,-,+,-	GATA2,GATA2,LOC90246,GATA2	-8718,-8109,11059,-3452
chr2:219745645-219745874	chr2	+	219745687	219745875	True	NM_017431,NM_025216	chr2,chr2	-,+	PRKAG3,WNT10A	-49175,-483
chr1:149865346-149866849	chr1	+	149865520	149866863	True	NM_175065,NM_016074,NM_003517,NM_003528	chr1,chr1,chr1,chr1	-,+,+,-	HIST2H2AB,BOLA1,HIST2H2AC,HIST2H2BE	-6054,4291,-7046,-7288
chr9:35909730-35909994	chr9	+	35909735	35909805	True	NR_024283,NM_001004487,NM_001039792	chr9,chr9,chr9	+,-,+	LOC158376,OR13J1,HRCT1	-306,-39337,-3597
chr5:154137630-154139590	chr5	+	154137677	154139238	True	NM_015315,NM_032385	chr5,chr5	+,-	LARP1,C5orf4	-45266,91025
chr5:176829107-176829310	chr5	+	176829123	176829353	True	NM_001029886,NM_000505,NM_003052	chr5,chr5,chr5	-,-,+	PFN3,F12,SLC34A1	-1486,7274,-17749
chr22:22337291-22337890	chr22	+	22337367	22337506	True	NM_007128,NM_003935	chr22,chr22	+,-	VPREB1,TOP3B	261693,-220
chr20:5108021-5108359	chr20	+	5108130	5108377	True	NM_182649,NM_003818,NR_028370,NM_002592	chr20,chr20,chr20,chr20	-,+,+,-	PCNA,CDS2,PCNA-AS1,PCNA	-7483,-699,-7949,-862
chr10:54534595-54534926	chr10	+	54534601	54534779	True	NM_012242,NM_000242	chr10,chr10	+,-	DKK1,MBL2	-460611,-3141
chr11:8969003-8969884	chr11	+	8969074	8969897	True	NM_020646,NM_182901	chr11,chr11	-,+	ASCL3,C11orf17	-4494,-36330
chr19:15165980-15166800	chr19	+	15166044	15166714	True	NM_006844,NM_012114	chr19,chr19	-,+	ILVBL,CASP14	69913,-5804
chr2:96999636-97000856	chr2	+	96999760	97000738	True	NM_015341,NM_001163523,NM_001163524,NM_178495,NM_001008949,NM_014014	chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,+,-	NCAPH,ITPRIPL1,ITPRIPL1,ITPRIPL1,ITPRIPL1,SNRNP200	745,-8749,-7873,-7883,-8756,-28453
chr7:134463803-134464555	chr7	+	134464036	134464504	True	NM_001628,NM_033138,NM_004342,NM_033157	chr7,chr7,chr7,chr7	-,+,+,+	AKR1B1,CALD1,CALD1,CALD1	-320148,-23,-23,-23
chr1:46771757-46772337	chr1	+	46771756	46772024	True	NM_006004,NM_006369	chr1,chr1	+,-	UQCRH,LRRC41	-2433,-2718
chr22:37500855-37501403	chr22	+	37501053	37501423	True	NM_024681,NM_153609	chr22,chr22	+,-	KCTD17,TMPRSS6	-53325,-1360
chr8:118540930-118541860	chr8	+	118540930	118541890	True	NM_080651,NM_000127	chr8,chr8	+,-	MED30,EXT1	-8017,582218
chr17:73177828-73178139	chr17	+	73177832	73178183	True	NM_001005849,NM_024844,NM_006937	chr17,chr17,chr17	-,+,-	SUMO2,NUP85,SUMO2	965,23413,965
chr11:65408649-65409758	chr11	+	65408718	65409640	True	NM_006747,NM_153253,NM_001145138	chr11,chr11,chr11	+,+,-	SIPA1,SIPA1,RELA	-3191,-1177,20853
chr13:40230207-40231259	chr13	+	40230268	40230935	True	NM_020751,NM_001145079,NR_026745,NR_036190	chr13,chr13,chr13,chr13	+,+,+,-	COG6,COG6,COG6,MIR4305	-555,-555,-555,7400
chr15:101135118-101135401	chr15	+	101135139	101135379	True	NM_001040616,NM_198243,NM_024708	chr15,chr15,chr15	-,+,+	LINS,ASB7,ASB7	7116,7375,7375
chr9:34569764-34570175	chr9	+	34569831	34570147	True	NR_024369,NM_001842	chr9,chr9	+,-	LOC415056,CNTFR	-1872,19625
chr5:60112727-60114067	chr5	+	60112744	60113375	True	NM_001104558,NM_174889	chr5,chr5	-,+	ELOVL7,NDUFAF2	26786,127580
chr10:46009862-46011114	chr10	+	46010043	46011110	True	NM_001002266,NM_000698	chr10,chr10	-,+	MARCH8,ALOX5	19759,-140466
chr18:54333726-54335582	chr18	+	54334003	54335598	True	NM_052834,NR_024546	chr18,chr18	+,-	WDR7,TXNL1	-15451,-28083
chr5:55031569-55031869	chr5	+	55031695	55031759	True	NM_173514,NM_001142549,NM_001166533,NM_024415	chr5,chr5,chr5,chr5	-,+,+,+	SLC38A9,DDX4,DDX4,DDX4	-23532,2085,2085,2085
chr13:114108003-114108506	chr13	+	114108175	114108538	True	NM_017905,NM_138430,NM_199162	chr13,chr13,chr13	+,-,-	TMCO3,ADPRHL1,ADPRHL1	36769,-336,-4718
chr2:58394269-58395383	chr2	+	58394367	58394994	True	NM_001114636,NM_001130481	chr2,chr2	-,+	FANCL,VRK2	73577,-120574
chr20:5919307-5919848	chr20	+	5919327	5919782	True	NM_032485,NM_015939	chr20,chr20	+,-	MCM8,TRMT6	11515,11441
chr16:2287691-2287949	chr16	+	2287698	2287928	True	NM_001374,NM_001178029	chr16,chr16	+,-	DNASE1L2,ECI1	-1281,13724
chr6:160510180-160511035	chr6	+	160510214	160511034	True	NR_003288,NM_003058	chr6,chr6	+,-	LOC729603,SLC22A2	3079,168979
chr9:123603322-123603577	chr9	+	123603381	123603582	True	NM_005047,NR_024408	chr9,chr9	-,+	PSMD5,LOC253039	1681,1737
chr3:142312709-142313132	chr3	+	142312776	142312928	True	NM_001184,NM_001145319	chr3,chr3	-,+	ATR,PLS1	-15108,2300
chr4:152633041-152634031	chr4	+	152633041	152633933	True	NM_004564,NM_001109977	chr4,chr4	-,+	PET112L,FAM160A1	48293,-302694
chr7:128766900-128767101	chr7	+	128766904	128767026	True	NR_002144,NR_034053	chr7,chr7	+,-	LOC407835,TNPO3	-630,-71677
chr6:52153202-52153753	chr6	+	52153203	52153357	True	NM_133367,NM_002388	chr6,chr6	+,-	PAQR8,MCM3	73568,-3621
chr1:155176487-155177168	chr1	+	155176714	155177142	True	NM_002455,NM_198883,NM_007112	chr1,chr1,chr1	+,+,-	MTX1,MTX1,THBS3	1347,1347,598
chr7:92076406-92076610	chr7	+	92076499	92076639	True	NM_000466,NM_021167	chr7,chr7	-,+	PEX1,GATAD1	81256,125
chr4:2045083-2045493	chr4	+	2045090	2045516	True	NM_001168243,NM_001141936,NM_005663	chr4,chr4,chr4	+,+,-	C4orf48,C4orf48,WHSC2	-1421,-1364,-34131
chr10:135188773-135189767	chr10	+	135188874	135189441	True	NM_207127,NM_152911,NM_004092,NR_037509,NM_207128	chr10,chr10,chr10,chr10,chr10	+,+,-,-,+	PAOX,PAOX,ECHS1,MIR3944,PAOX	3299,3299,-1966,-3707,3299
chr16:33725642-33726098	chr16	+	33725642	33726074	True	NR_033866,NM_001205265	chr16,chr16	-,+	LOC390705,TP53TG3B	-426940,-463573
chr16:33725642-33726098	chr16	-	32941719	32941769	False	NR_003083,NM_016212	chr16,chr16	-,+	SLC6A10P,TP53TG3	-45256,263210
chr16:33725642-33726098	chr16	-	31998247	31998323	False	NR_002827,NM_003414	chr16,chr16	-,+	HERC2P4,ZNF267	165601,-113219
chr7:27240244-27240771	chr7	+	27240272	27240788	True	NM_000522,NR_037843	chr7,chr7	-,+	HOXA13,NCRNA00213	-547,-267
chr14:81421346-81421688	chr14	+	81421478	81421636	True	NM_001018036,NM_001142626,NM_152446,NM_000369	chr14,chr14,chr14,chr14	+,+,-,+	TSHR,TSHR,C14orf145,TSHR	232,232,-15594,232
chr5:122755160-122756987	chr5	+	122755546	122756906	True	NM_001031812,NM_153223,NM_001166226	chr5,chr5,chr5	+,-,-	CSNK1G3,CEP120,CEP120	90886,2430,2430
chr4:9670173-9671502	chr4	+	9670220	9671056	True	NR_031688,NM_000798	chr4,chr4	-,+	MIR548I2,DRD5	-112283,112201
chr17:38331939-38332387	chr17	+	38332087	38332415	True	NM_016339,NM_021724	chr17,chr17	+,-	RAPGEFL1,NR1D1	1826,-75114
chr22:42897613-42898327	chr22	+	42897920	42898224	True	NR_027786,NM_015703	chr22,chr22	+,-	SERHL,RRP7A	-1386,17655
chr22:42897613-42898327	chr22	+	42951233	42951537	False	NR_002184,NM_014509	chr22,chr22	-,+	RRP7B,SERHL2	26530,-1359
chr2:12858258-12858921	chr2	+	12858403	12858888	True	NR_027303,NM_021643,NR_036226	chr2,chr2,chr2	+,+,-	TRIB2,TRIB2,MIR4262	-1456,-1456,-881291
chr10:88731923-88732213	chr10	+	88732001	88732093	True	NM_024756,NM_133447,NM_006829	chr10,chr10,chr10	-,+,+	MMRN2,AGAP11,C10orf116	-14576,-1554,-3864
chr12:93390770-93392128	chr12	+	93390823	93391922	True	NM_001004330,NM_003566	chr12,chr12	+,-	PLEKHG7,EEA1	-260622,-67716
chr1:175939498-175941150	chr1	+	175939612	175941173	True	NM_021936,NR_002998	chr1,chr1	+,-	PAPPA2,SCARNA3	491133,-1936
chr11:74204182-74204444	chr11	+	74204266	74204456	True	NM_006591,NM_001144869	chr11,chr11	+,-	POLD3,LIPT2	99172,349
chr19:2387665-2388128	chr19	+	2387820	2388100	True	NM_182973,NM_012458	chr19,chr19	+,-	TMPRSS9,TIMM13	1683,39825
chr2:225449006-225449322	chr2	+	225449054	225449264	True	NM_022915,NM_003590	chr2,chr2	+,-	MRPL44,CUL3	-626991,896
chrX:122866952-122867585	chrX	+	122867055	122867334	True	NM_001204401,NM_001081550	chrX,chrX	+,-	XIAP,THOC2	126327,-151
chr3:150709116-150710067	chr3	+	150709145	150710036	True	NR_024066,NM_174878	chr3,chr3	+,-	CLRN1OS,CLRN1	-18743,-18359
chr11:61721104-61722390	chr11	+	61721551	61722295	True	NM_001139443,NM_004183,NM_002032	chr11,chr11,chr11	+,+,-	BEST1,BEST1,FTH1	-4253,-4253,12887
chr20:11903754-11904406	chr20	+	11903759	11904396	True	NM_000214,NM_014962	chr20,chr20	-,+	JAG1,BTBD3	-1249065,-5245
chr10:48766234-48767949	chr10	+	48766452	48767911	True	NM_001042357,NM_153034	chr10,chr10	-,+	PTPN20B,ZNF488	39125,-411425
chr10:48766234-48767949	chr10	+	46579558	46581017	False	NR_027632,NM_001042357	chr10,chr10	+,-	FAM35B,PTPN20B	316623,39092
chr10:48766234-48767949	chr10	+	49286983	49288442	False	NR_029396,NM_002750	chr10,chr10	-,+	LOC399753,MAPK8	-47325,321244
chr2:65590494-65590833	chr2	+	65590510	65590870	True	NM_005722,NM_001128210	chr2,chr2	+,-	ACTR2,SPRED2	-135732,3111
chr3:185264851-185265466	chr3	+	185264936	185265301	True	NM_021627,NM_139248	chr3,chr3	+,-	SENP2,LIPH	38729,5119
chr10:5934116-5934643	chr10	+	5934129	5934604	True	NM_019046,NM_001009941,NM_178150,NM_001009943,NM_032807	chr10,chr10,chr10,chr10,chr10	-,-,+,-,+	ANKRD16,ANKRD16,FBXO18,ANKRD16,FBXO18	-2269,-2269,-1966,-2269,1744
chr2:128406829-128407126	chr2	+	128406828	128407084	True	NM_005291,NM_001161416,NR_027823,NM_001161417,NM_001161415	chr2,chr2,chr2,chr2,chr2	+,+,-,+,+	GPR17,GPR17,LIMS2,GPR17,GPR17	-3440,-3440,-1075,-3440,-3440
chr10:46222430-46222663	chr10	+	46222430	46222670	True	NM_174890,NM_015262,NM_001169106,NM_001169107	chr10,chr10,chr10,chr10	-,+,+,+	ANUBL1,FAM21C,FAM21C,FAM21C	-54179,-5,-5,-5
chr10:46222430-46222663	chr10	+	51827612	51827670	False	NM_001005751,NM_001143974	chr10,chr10	+,-	FAM21A,ASAH2	13,180750
chr17:27919073-27919813	chr17	+	27919076	27919830	True	NM_014030,NM_001085454,NM_152345	chr17,chr17,chr17	-,-,+	GIT1,GIT1,ANKRD13B	-2466,-2466,696
chr10:98065891-98067684	chr10	+	98066249	98066986	True	NM_001017520,NM_013314,NM_004088	chr10,chr10,chr10	+,-,+	DNTT,BLNK,DNTT	-2215,-34916,-2215
chrX:12884776-12886130	chrX	+	12884867	12886129	True	NM_016562,NR_030727	chrX,chrX	+,-	TLR7,LOC349408	-34,75340
chr6:56951064-56952166	chr6	+	56951063	56951878	True	NM_001031623,NM_183227,NM_015555	chr6,chr6,chr6	+,-,+	ZNF451,RAB23,ZNF451	2949,134429,2949
chr4:57254797-57255373	chr4	+	57254846	57255326	True	NM_006452,NM_181806	chr4,chr4	+,-	PAICS,AASDH	46588,-1208
chr12:110718936-110719146	chr12	+	110718970	110719148	True	NM_001135765,NM_170665,NM_001681,NM_016238	chr12,chr12,chr12,chr12	+,+,+,-	ATP2A2,ATP2A2,ATP2A2,ANAPC7	11,11,11,122437
chr20:32250271-32250815	chr20	+	32250341	32250813	True	NM_080825,NM_031231,NM_001024675	chr20,chr20,chr20	+,-,+	C20orf144,NECAB3,C20orf134	-300,11501,3490
chr4:10621539-10622589	chr4	+	10621544	10622396	True	NR_030298,NM_052964	chr4,chr4	+,-	MIR572,CLNK	748054,64052
chr22:38666163-38666622	chr22	+	38666278	38666570	True	NM_012264,NM_001195072,NM_001195071,NM_001161573	chr22,chr22,chr22,chr22	-,-,-,+	TMEM184B,TMEM184B,TMEM184B,MAFF	2520,2520,2150,-67302
chr1:53663404-53664823	chr1	+	53663711	53664675	True	NM_017887,NM_000098	chr1,chr1	-,+	C1orf123,CPT2	21664,-1661
chr7:72342276-72344086	chr7	+	72342515	72344133	True	NR_003666,NM_172020	chr7,chr7	-,+	SPDYE7P,POM121	-2860,5802
chr7:72342276-72344086	chr7	+	101998384	101998434	False	NM_024653,NM_001146210	chr7,chr7	+,-	PRKRIP1,SPDYE6	38369,-1495
chr7:72342276-72344086	chr7	-	66741694	66741744	False	NM_022906,NR_022007	chr7,chr7	+,-	STAG3L4,PMS2P4	25871,25712
chr7:72342276-72344086	chr7	+	76172797	76172847	False	NR_029411,NR_003262	chr7,chr7	+,-	LOC100133091,FDPSL2A	5810,-68480
chr7:72342276-72344086	chr7	-	75121324	75121414	False	NM_001099415,NM_001099435	chr7,chr7	-,+	POM121C,SPDYE5	-5756,2884
chr10:128994137-128994356	chr10	+	128994247	128994403	True	NM_001030013,NM_001039762	chr10,chr10	+,-	NPS,FAM196A	353209,69
chr1:206775656-206776203	chr1	+	206775728	206776185	True	NM_006893,NM_001201478,NM_001004023	chr1,chr1,chr1	-,-,+	EIF2D,EIF2D,DYRK3	9770,9770,32695
chr12:46766017-46766221	chr12	+	46766085	46766193	True	NM_152641,NM_018976	chr12,chr12	+,-	ARID2,SLC38A2	-642516,502
chr16:88635399-88636210	chr16	+	88635410	88636048	True	NM_000101,NM_144604	chr16,chr16	-,+	CYBA,ZC3H18	81459,740
chrX:1510935-1511145	chrY	+	1460955	1461163	False	NM_001636,NR_026710,NR_026711	chrY,chrY,chrY	-,+,+	SLC25A6,ASMTL-AS1,ASMTL-AS1	30,8260,8260
chrX:1510935-1511145	chrX	+	1510955	1511163	True	NM_001636,NR_026710,NR_026711	chrX,chrX,chrX	-,+,+	SLC25A6,ASMTL-AS1,ASMTL-AS1	30,8260,8260
chr10:75008349-75009686	chr10	+	75008416	75009379	True	NM_173348,NM_015190,NM_016065	chr10,chr10,chr10	+,-,-	FAM149B1,DNAJC9,MRPS16	-80596,-1391,3123
chr6:35309400-35310187	chr6	+	35309602	35310120	True	NM_001171819,NM_006238,NM_003214,NM_001171820,NM_001171818,NM_177435	chr6,chr6,chr6,chr6,chr6,chr6	+,+,-,+,+,+	PPARD,PPARD,TEAD3,PPARD,PPARD,PPARD	214,214,154791,214,214,214
chr1:236851555-236852132	chr1	+	236851576	236852155	True	NM_018072,NM_001103	chr1,chr1	-,+	HEATR1,ACTN2	-83735,-1867
chr13:114568120-114569364	chr13	+	114568344	114569396	True	NM_000820,NR_024609	chr13,chr13	-,+	GAS6,FLJ44054	-1298,17213
chr17:63556416-63556658	chr17	+	63556590	63556658	True	NM_004655,NM_003835	chr17,chr17	-,+	AXIN2,RGS9	1132,-423185
chr6:160225429-160226170	chr6	+	160225438	160226100	True	NM_173516,NM_030752	chr6,chr6	+,-	PNLDC1,TCP1	-4188,-14703
chr19:58181909-58182670	chr19	+	58181909	58182692	True	NM_152677,NM_001085384	chr19,chr19	+,-	ZSCAN4,ZNF154	-1657,37938
chr5:169069652-169070639	chr5	+	169069720	169070333	True	NM_001129891,NM_004946	chr5,chr5	-,+	FAM196B,DOCK2	337461,-5527
chr3:70171389-70172718	chr3	+	70172052	70172420	True	NM_198178,NM_015123	chr3,chr3	+,-	MITF,FRMD4B	-186357,-736622
chr1:203597629-203598537	chr1	+	203597947	203598567	True	NM_002023,NM_001684,NM_001001396	chr1,chr1,chr1	-,+,+	FMOD,ATP2B4,ATP2B4	-277658,-2070,-2070
chr9:95897462-95898131	chr9	+	95897536	95898034	True	NM_004148,NM_032310	chr9,chr9	-,+	NINJ1,C9orf89	-966,-39137
chr14:52779214-52779665	chr14	+	52779218	52779715	True	NM_000956,NM_001160047	chr14,chr14	+,-	PTGER2,TXNDC16	1300,239638
chr5:89823560-89825143	chr5	+	89823781	89824986	True	NM_198273,NM_032119	chr5,chr5	-,+	LYSMD3,GPR98	465,29630
chr2:21268916-21270403	chr2	+	21269329	21270307	True	NM_182828,NM_000384	chr2,chr2	+,-	GDF7,APOB	-402969,-2384
chr11:76432217-76433380	chr11	+	76432290	76433412	True	NM_015516,NR_024042	chr11,chr11	+,-	TSKU,GUCY2E	60872,-93
chr4:78059-78744	chr4	+	78210	78513	True	NM_001039127,NM_001137608	chr4,chr4	+,-	ZNF718,ZNF732	-24988,211488
chr6:132707463-132708747	chr6	+	132707631	132708418	True	NM_015529,NM_175057	chr6,chr6	-,+	MOXD1,TAAR9	14307,151008
chr4:42401270-42401708	chr4	+	42401397	42401695	True	NM_207406,NM_001080505	chr4,chr4	-,+	BEND4,SHISA3	-246502,-1595
chr10:95653441-95653683	chr10	+	95653471	95653587	True	NR_002319,NM_001134658,NM_153226	chr10,chr10,chr10	-,+,+	PIPSL,TMEM20,TMEM20	68135,142,142
chr11:122720740-122720980	chr11	+	122720757	122721003	True	NM_019604,NM_001098169	chr11,chr11	+,-	CRTAM,BSX	-11553,131426
chr12:10876144-10876987	chr12	+	10876255	10877013	True	NM_003651,NM_001145426,NM_005042	chr12,chr12,chr12	-,-,+	CSDA,CSDA,PRH2	-302,-302,204820
chr9:100817082-100818110	chr9	+	100817120	100818001	True	NM_018946,NM_014788	chr9,chr9	+,-	NANS,TRIM14	957,63531
chr4:147560577-147560947	chr4	+	147560576	147560944	True	NM_032128,NM_004575	chr4,chr4	-,+	SLC10A7,POU4F2	-117453,-582
chr7:76091603-76091951	chr7	+	76091724	76091936	True	NM_020892,NR_003262,NM_001102594,NM_001102595	chr7,chr7,chr7,chr7	+,-,+,+	DTX2,FDPSL2A,DTX2,DTX2	-803,12431,-803,-803
chr7:76091603-76091951	chr7	+	76589837	76590049	False	NR_023383,NM_006682	chr7,chr7	+,-	PMS2P11,FGL2	20089,239151
chr2:131673357-131673572	chr2	+	131673403	131673539	True	NM_032995,NM_015320,NM_001009993	chr2,chr2,chr2	+,+,-	ARHGEF4,ARHGEF4,FAM168B	684,684,177515
chr22:46410490-46410813	chr22	+	46410618	46410862	True	NR_027036,NR_027240	chr22,chr22	-,+	LOC100271722,LOC730668	29936,-8173
chr7:139530471-139531149	chr7	+	139530492	139531183	True	NR_029394,NM_001061,NM_022740,NM_030984,NM_001166253	chr7,chr7,chr7,chr7,chr7	+,+,-,+,+	TBXAS1,TBXAS1,HIPK2,TBXAS1,TBXAS1	-1599,-1599,-52799,-1599,-1599
chr2:220093383-220093612	chr2	+	220093480	220093652	True	NM_024085,NM_001077198,NM_018089,NM_001042410,NM_005689	chr2,chr2,chr2,chr2,chr2	-,-,+,+,-	ATG9A,ATG9A,ANKZF1,ANKZF1,ABCB6	759,759,826,957,-9768
chrX:153715173-153715505	chrX	+	153715206	153715446	True	NM_001142392,NM_019848,NM_001142391,NM_014235,NM_017514,NM_006014	chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,+,-	SLC10A3,SLC10A3,SLC10A3,UBL4A,PLXNA3,LAGE3	3606,3606,3606,-274,-28634,-7610
chr6:130027751-130029353	chr6	+	130028047	130029395	True	NM_001007102,NM_033515	chr6,chr6	+,-	L3MBTL3,ARHGAP18	310332,2025
chr12:72232334-72233057	chr12	+	72232461	72232873	True	NR_027449,NM_022771,NM_001146214,NM_001146213,NR_024072	chr12,chr12,chr12,chr12,chr12	+,+,+,+,-	TBC1D15,TBC1D15,TBC1D15,TBC1D15,MRS2P2	613,613,613,613,11940
chr1:153329424-153329779	chr1	+	153329438	153329720	True	NM_020393,NM_002965	chr1,chr1	-,+	PGLYRP4,S100A9	-8416,609
chr7:99062441-99063539	chr7	+	99062913	99063338	True	NM_213603,NM_001198879,NM_001003714,NM_001039178,NM_001003713,NM_001013258,NM_004889	chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,-,-,-,-,+,-	ZNF789,ATP5J2-PTCD1,ATP5J2,ATP5J2,ATP5J2,ZNF789,ATP5J2	7176,537,537,537,537,7176,537
chr14:23525887-23526147	chr14	+	23525919	23526141	True	NM_144985,NM_022478,NM_001099780	chr14,chr14,chr14	-,-,+	CDH24,CDH24,PSMB11	656,656,-14594
chr9:19278224-19279249	chr9	+	19278466	19278961	True	NM_001010,NM_017925	chr9,chr9	-,+	RPS6,DENND4C	101325,11787
chr19:13047654-13048053	chr19	+	13047672	13047739	True	NM_004461,NM_005053,NM_004343	chr19,chr19,chr19	-,+,+	FARSA,RAD23A,CALR	-3114,8914,1674
chr13:48669386-48669655	chr13	+	48669385	48669481	True	NM_018283,NM_014166	chr13,chr13	+,-	NUDT15,MED4	-57733,-145
chr1:101360783-101360990	chr1	+	101360806	101360963	True	NM_001439,NM_133496,NM_001144884,NM_001033025	chr1,chr1,chr1,chr1	-,+,+,-	EXTL2,SLC30A7,SLC30A7,EXTL2	-388,670,668,-388
chr14:75335257-75336140	chr14	+	75335568	75335926	True	NM_001933,NM_001080408	chr14,chr14	+,-	DLST,PROX2	12667,-5031
chr16:10674865-10676098	chr16	+	10674957	10676140	True	NM_024997,NM_001424	chr16,chr16	+,-	ATF7IP2,EMP2	-152283,-418
chr3:9690485-9690735	chr3	+	9690503	9690582	True	NM_001077526,NM_198560,NM_022485,NM_001077525	chr3,chr3,chr3,chr3	+,-,+,+	MTMR14,LHFPL4,MTMR14,MTMR14	534,-95017,534,534
chr4:184579205-184579858	chr4	+	184579222	184579846	True	NM_199053,NM_152682,NM_021942	chr4,chr4,chr4	+,-,+	C4orf41,RWDD4,C4orf41	599,535,599
chr1:92950773-92950982	chr1	+	92950783	92950934	True	NM_001127216,NM_001127215,NM_024813,NM_005263	chr1,chr1,chr1,chr1	-,-,+,-	GFI1,GFI1,RPAP2,GFI1	744,-1427,-186312,1549
chr11:120213195-120214829	chr11	+	120213206	120214509	True	NM_012101,NM_001198665,NM_015313	chr11,chr11,chr11	-,+,+	TRIM29,ARHGEF12,ARHGEF12	-204343,-5648,-5648
chr7:21984041-21984355	chr7	+	21984127	21984321	True	NM_003777,NM_001127371,NM_001127370,NM_018719	chr7,chr7,chr7,chr7	+,-,-,-	DNAH11,CDCA7L,CDCA7L,CDCA7L	-401347,1271,1271,1271
chr9:34834542-34835488	chr9	+	34834768	34835504	True	NR_024481,NM_015297	chr9,chr9	-,+	C9orf144,KIAA1045	3129,122687
chr9:34834542-34835488	chr9	+	34725934	34725984	False	NM_004512,NM_001141917	chr9,chr9	+,-	IL11RA,C9orf144B	-72053,3601
chr14:95108046-95109269	chr14	+	95108101	95109291	True	NM_173850,NR_015340	chr14,chr14	-,+	SERPINA12,SERPINA13	-123920,-1090
chrY:14459482-14460599	chrY	+	14459572	14460310	True	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	313987,73135
chr15:58343764-58345279	chr15	+	58343990	58345298	True	NM_020980,NM_003888	chr15,chr15	+,-	AQP9,ALDH1A2	85109,12658
chr5:156390221-156392170	chr5	+	156390453	156391846	True	NM_138379,NM_001146726,NR_028472	chr5,chr5,chr5	-,-,+	TIMD4,TIMD4,LOC100286948	-187,-187,-39404
chr19:55328447-55329009	chr19	+	55328528	55329022	True	NM_013289,NM_001127255	chr19,chr19	+,-	KIR3DL1,NLRP7	-686,129901
chr8:87880854-87881113	chr8	+	87880943	87881157	True	NM_019098,NM_173538	chr8,chr8	-,+	CNGB3,CNBD1	-125040,-2326
chr1:110091725-110092944	chr1	+	110091771	110092988	True	NM_006496,NM_031936,NM_020703	chr1,chr1,chr1	+,+,-	GNAI3,GPR61,AMIGO1	-636,-9328,-39435
chr8:8865560-8865884	chr8	+	8865572	8865933	True	NM_153332,NM_004225	chr8,chr8	+,-	ERI1,MFHAS1	-5321,-114441
chr16:15743342-15743775	chr16	+	15743560	15743794	True	NM_001143979,NM_001184998,NM_014647,NR_030159,NM_001184999,NM_017668	chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,+,-,+	NDE1,KIAA0430,KIAA0430,MIR484,KIAA0430,NDE1	-6487,-6537,-6537,-6460,-6537,288
chr14:74320927-74322442	chr14	+	74321373	74322081	True	NM_152444,NM_001146154,NM_001146155,NM_001043318	chr14,chr14,chr14,chr14	+,+,+,-	PTGR2,PTGR2,PTGR2,C14orf43	-2807,-2894,-2881,-67477
chr16:48724996-48725278	chr16	+	48725014	48725196	True	NM_153029,NM_031490	chr16,chr16	-,+	N4BP1,LONP2	-80894,-446869
chr10:6366480-6367072	chr10	+	6366679	6366883	True	NM_004566,NM_006257	chr10,chr10	+,-	PFKFB3,PRKCQ	-121898,255409
chr4:42099632-42100256	chr4	+	42099789	42100022	True	NM_006345,NM_001159547	chr4,chr4	+,-	SLC30A9,BEND4	-107326,54932
chr3:52828284-52828601	chr3	+	52828366	52828568	True	NM_003157,NM_002217	chr3,chr3	-,+	NEK4,ITIH3	-23401,215
chr5:140255447-140255774	chr5	+	140255510	140255811	True	NM_031865,NM_031864,NM_031861,NM_002109,NM_018903,NM_018902,NM_018904	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,-,+,+,+	PCDHA13,PCDHA12,PCDHA11,HARS,PCDHA12,PCDHA11,PCDHA13	6042,-630,-7730,-184539,-630,-7730,6042
chr2:102770510-102771648	chr2	+	102770686	102771669	True	NM_000877,NM_032718	chr2,chr2	+,-	IL1R1,MFSD9	-335,581727
chr3:108308911-108310697	chr3	+	108308913	108310340	True	NM_020890,NM_014648	chr3,chr3	-,+	KIAA1524,DZIP3	-422,-627
chr19:55882215-55882827	chr19	+	55882340	55882582	True	NM_000641,NM_001145402,NM_139172	chr19,chr19,chr19	-,-,+	IL11,FAM71E2,TMEM190	-526,-7720,5621
chr22:30984768-30985147	chr22	+	30984835	30985181	True	NM_000355,NM_014303	chr22,chr22	+,-	TCN2,PES1	17888,2763
chr16:2077521-2077830	chr16	+	2077562	2077870	True	NM_001130012,NM_178167,NM_001099456,NM_004785	chr16,chr16,chr16,chr16	+,-,+,+	SLC9A3R2,ZNF598,NPW,SLC9A3R2	-725,-17799,-8092,-725
chr6:168275506-168276054	chr6	+	168275660	168276093	True	NR_027906,NM_001040000	chr6,chr6	-,+	C6orf124,MLLT4	-48184,-48042
chr18:46987548-46988358	chr18	+	46987582	46988171	True	NM_017653,NR_031720	chr18,chr18	-,+	DYM,MIR1539	-503,25571
chr1:115238455-115239069	chr1	+	115238459	115238986	True	NM_000036,NM_003176,NM_001172626	chr1,chr1,chr1	-,+,-	AMPD1,SYCP1,AMPD1	-220,158468,-220
chr20:33457268-33458567	chr20	+	33457282	33458086	True	NM_178026,NM_018677,NM_001076552,NR_028046	chr20,chr20,chr20,chr20	-,+,+,+	GGT7,ACSS2,ACSS2,ACSS2	2625,6241,6241,4679
chr6:35465915-35466175	chr6	+	35465992	35466222	True	NM_007104,NM_003214	chr6,chr6	+,-	RPL10A,TEAD3	-29865,-1131
chr10:23482296-23482535	chr10	+	23482320	23482564	True	NM_153714,NM_178161	chr10,chr10	-,+	C10orf67,PTF1A	151258,-911
chr15:38991781-38992094	chr15	+	38991808	38992145	True	NM_005739,NM_207444	chr15,chr15	-,+	RASGRP1,C15orf53	-134801,-3067
chr21:38379867-38380107	chr21	+	38380031	38380111	True	NM_000411,NM_018962	chr21,chr21	-,+	HLCS,DSCR6	-17495,-1226
chr1:211665284-211665665	chr1	+	211665287	211665707	True	NM_183059,NM_001164688,NR_026761	chr1,chr1,chr1	-,-,+	RD3,RD3,C1orf97	602,602,-109242
chr1:101387815-101388731	chr1	+	101388020	101388555	True	NM_001439,NM_133496	chr1,chr1	-,+	EXTL2,SLC30A7	-27602,-26450
chr9:135230667-135231014	chr9	+	135230740	135230942	True	NM_207417,NM_015046	chr9,chr9	+,-	C9orf171,SETX	54668,-368
chr14:77648616-77649338	chr14	+	77648659	77649329	True	NM_174976,NM_020431	chr14,chr14	-,+	ZDHHC22,TMEM63C	-40525,-608
chr7:56360680-56362099	chr7	+	56360971	56362133	True	NR_029420,NR_026929	chr7,chr7	-,+	LOC650226,DKFZp434L192	153985,201782
chr17:38518615-38518975	chr17	+	38518637	38518965	True	NM_001024809,NM_152219	chr17,chr17	+,-	RARA,GJD3	-20417,2030
chr11:58881570-58883478	chr11	+	58881813	58883513	True	NM_001142704,NR_033853,NM_001142703,NM_198947	chr11,chr11,chr11,chr11	+,-,+,+	FAM111B,LOC283194,FAM111B,FAM111B	-7206,-55888,-7206,-7206
chr14:59104298-59104547	chr14	+	59104383	59104455	True	NM_016651,NM_012460,NM_001079520	chr14,chr14,chr14	+,-,+	DACT1,TIMM9,DACT1	301,-210151,301
chr11:88795968-88796733	chr11	+	88795973	88796524	True	NM_000842,NM_000372	chr11,chr11	-,+	GRM5,TYR	343,114515
chr11:88795968-88796733	chr11	-	49582695	49583072	False	NR_027044,NM_004476	chr11,chr11	+,-	LOC440040,FOLH1	-2667,-352473
chr9:123341801-123342158	chr9	+	123341819	123342011	True	NR_027442,NM_018249,NM_001011649	chr9,chr9,chr9	+,-,-	LOC100288842,CDK5RAP2,CDK5RAP2	213763,476,476
chr15:40988163-40988492	chr15	+	40988408	40988520	True	NM_133487,NM_018145,NM_001164269,NM_001164270,NM_002875	chr15,chr15,chr15,chr15,chr15	+,-,+,+,+	RAD51,FAM82A2,RAD51,RAD51,RAD51	-1143,58988,-1092,-1143,-1143
chr10:6328031-6329301	chr10	+	6328227	6328992	True	NM_004566,NM_000417	chr10,chr10	+,-	PFKFB3,IL2RA	-83440,-223894
chr3:122513063-122513800	chr3	+	122513085	122513634	True	NM_024610,NM_032839	chr3,chr3	-,+	HSPBAP1,DIRC2	-435,266
chr6:100913454-100913874	chr6	+	100913540	100913910	True	NM_021620,NM_005068	chr6,chr6	+,-	PRDM13,SIM1	-858947,-1989
chr22:45679015-45680270	chr22	+	45679324	45680152	True	NM_006953,NM_001009880,NM_001167574	chr22,chr22,chr22	+,-,+	UPK3A,KIAA0930,UPK3A	715,-42674,715
chr20:4229022-4229387	chr20	+	4229066	4229294	True	NM_000678,NR_033917	chr20,chr20	-,+	ADRA1D,LOC728228	415,-55380
chr19:11463935-11464171	chr19	+	11464061	11464205	True	NM_001170635,NM_001080503,NM_022737,NM_198536,NM_001145416,NM_033408	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,-,-,-	LPPR2,CCDC159,LPPR2,TMEM205,TMEM205,TMEM205	1856,-6931,1856,-7080,-7080,-7080
chr8:124554043-124554338	chr8	+	124554174	124554260	True	NM_148177,NM_018024,NM_058229	chr8,chr8,chr8	-,+,-	FBXO32,WDYHV1,FBXO32	-9791,-125260,-728
chrX:83623291-83623816	chrX	+	83623460	83623678	True	NM_001177478,NM_021118	chrX,chrX	-,+	HDX,CYLC1	133865,-507354
chr6:160134877-160135168	chr6	+	160135016	160135190	True	NM_000636,NM_152858	chr6,chr6	-,+	SOD2,WTAP	-20663,12961
chrX:48455608-48455941	chrX	+	48455699	48455893	True	NM_017883,NM_001166426,NM_033518,NR_029427	chrX,chrX,chrX,chrX	+,+,-,+	WDR13,WDR13,SLC38A5,WDR13	-10,330,-127055,-10
chrX:153625151-153625563	chrX	+	153625520	153625594	True	NM_006013,NM_006730,NR_000011,NR_026898	chrX,chrX,chrX,chrX	+,-,+,+	RPL10,DNASE1L1,SNORA70,RPL10	976,12031,3027,976
chr17:8301011-8301695	chr17	+	8301096	8301682	True	NM_001146684,NM_001025579	chr17,chr17	-,+	RNF222,NDEL1	12,37496
chr7:30515284-30517221	chr7	+	30515491	30517121	True	NM_006092,NR_002186	chr7,chr7	-,+	NOD1,DKFZP586I1420	1322,-105878
chr17:80275119-80275363	chr17	+	80275125	80275297	True	NM_207459,NM_006137	chr17,chr17	+,-	TEX19,CD7	41825,233
chr16:56704190-56704435	chr16	+	56704202	56704419	True	NR_003669,NM_005950,NM_005951	chr16,chr16,chr16	+,-,+	MT1IP,MT1G,MT1H	5229,-2225,-527
chr19:44114645-44115892	chr19	+	44114658	44115832	True	NM_001145641,NM_182498	chr19,chr19	+,-	SRRM5,ZNF428	420,8232
chr16:30440944-30441219	chr16	+	30440948	30441237	True	NM_024096,NM_016643	chr16,chr16	-,+	DCTPP1,ZNF771	186,-22264
chr18:67956087-67956287	chr18	+	67956244	67956330	True	NM_173630,NM_004232	chr18,chr18	-,+	RTTN,SOCS6	-83282,-158
chr2:36580925-36582396	chr2	+	36581129	36582366	True	NR_037631,NM_016441	chr2,chr2	-,+	LOC100288911,CRIM1	398,1003
chr12:56733848-56734924	chr12	+	56734023	56734972	True	NM_001127460,NM_016584,NM_001166279,NM_014871	chr12,chr12,chr12,chr12	-,+,-,-	PAN2,IL23A,PAN2,PAN2	-6490,-1424,-6186,-6186
chr22:30227414-30227762	chr22	+	30227414	30227753	True	NM_021090,NM_032204	chr22,chr22	+,-	MTMR3,ASCC2	51404,6552
chr9:86570425-86571430	chr9	+	86570461	86571375	True	NM_024945,NM_032307	chr9,chr9	+,-	RMI1,C9orf64	24261,338
chr11:66207045-66207299	chr11	+	66207044	66207240	True	NM_170739,NM_170738,NM_178864,NM_016050	chr11,chr11,chr11,chr11	-,-,+,-	MRPL11,MRPL11,NPAS4,MRPL11	-734,-734,-18622,-734
chr5:178986116-178986465	chr5	+	178986200	178986432	True	NM_005520,NM_025158,NM_001040451,NM_001040452	chr5,chr5,chr5,chr5	-,+,+,+	HNRNPH1,RUFY1,RUFY1,RUFY1	64341,-8687,299,299
chr2:73146367-73146575	chr2	+	73146367	73146594	True	NM_015189,NM_004097	chr2,chr2	-,+	EXOC6B,EMX1	-93190,-1817
chr6:138823237-138823657	chr6	+	138823241	138823608	True	NM_001144060,NM_014320	chr6,chr6	-,+	NHSL1,HEBP2	-2662,-97956
chr15:74527096-74527721	chr15	+	74527193	74527631	True	NM_001199040,NM_025055	chr15,chr15	-,+	STRA6,CCDC33	-25147,1035
chr18:55503560-55505013	chr18	+	55503815	55504411	True	NM_001144967,NM_005603	chr18,chr18	+,-	NEDD4L,ATP8B1	207207,-33488
chr14:45717563-45718453	chr14	+	45717601	45718024	True	NM_018353,NM_020937	chr14,chr14	-,+	MIS18BP1,FANCM	4638,-112522
chr1:207120458-207121119	chr1	+	207120501	207120867	True	NM_002644,NM_006850	chr1,chr1	-,+	PIGR,IL24	-690,-49764
chr1:43252362-43252991	chr1	+	43252375	43252989	True	NM_024097,NM_022356	chr1,chr1	+,-	C1orf50,LEPRE1	-19510,-19620
chr10:46921042-46922551	chr10	+	46921080	46922563	True	NR_027632,NM_181519	chr10,chr10	+,-	FAM35B,SYT15	-23495,48088
chr10:46921042-46922551	chr10	+	88933735	88934411	False	NM_005271,NM_001099338	chr10,chr10	-,+	GLUD1,FAM22A	-78959,50793
chr10:46921042-46922551	chr10	+	47403149	47404631	False	NR_024495,NR_027634	chr10,chr10	-,+	LOC642826,FAM35B2	-159655,-23485
chr20:56960121-56960354	chr20	+	56960121	56960229	True	NM_004738,NR_003505,NR_036633,NM_001195677	chr20,chr20,chr20,chr20	+,-,+,+	VAPB,PPP4R1L,VAPB,VAPB	3945,-75626,3945,3945
chrX:134656020-134657029	chrX	+	134656058	134656936	True	NM_007131,NM_182540	chrX,chrX	-,+	ZNF75D,DDX26B	-226093,-1554
chr1:202138735-202139711	chr1	+	202138765	202139759	True	NR_002930,NR_037663,NR_037664,NM_001199797,NM_080588,NM_002832	chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,-,-,-	PTPRVP,PTPN7,PTPN7,PTPN7,PTPN7,PTPN7	-1637,-8049,-8049,-8049,-9646,-8049
chr3:179375270-179376765	chr3	+	179375633	179376628	True	NM_177988,NM_003940	chr3,chr3	-,+	MRPL47,USP13	-53199,-4751
chr16:58718948-58719385	chr16	+	58719129	58719319	True	NM_018231,NM_024860	chr16,chr16	-,+	SLC38A7,SETD6	-455,-169797
chr19:51569723-51571351	chr19	+	51569989	51571217	True	NM_015596,NM_014441	chr19,chr19	-,+	KLK13,SIGLEC9	-1622,56919
chr1:153605365-153606035	chr1	+	153605666	153606060	True	NM_001024210,NM_001024211,NM_001024212,NM_001024213,NM_006271,NM_015607,NM_005979	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,+,+,-	S100A13,S100A13,S100A13,S100A13,S100A1,CHTOP,S100A13	558,-5549,-5922,-6142,-4844,464,-4951
chr22:24977584-24978625	chr22	+	24977830	24978336	True	NM_207644,NM_013430	chr22,chr22	-,+	C22orf36,GGT1	10749,1381
chr5:40756411-40757062	chr5	+	40756443	40757032	True	NM_012382,NM_000958	chr5,chr5	-,+	TTC33,PTGER4	-371,-76462
chr8:117951591-117952033	chr8	+	117951884	117952021	True	NM_006265,NM_001025357	chr8,chr8	-,+	RAD21,C8orf85	-64779,-1479
chr1:170635481-170635907	chr1	+	170635619	170635945	True	NM_022716,NM_006902,NR_026957	chr1,chr1,chr1	+,+,-	PRRX1,PRRX1,LOC284688	-2358,-2358,-382270
chr17:40764130-40765412	chr17	+	40764232	40765046	True	NM_001070,NR_026697,NM_178126	chr17,chr17,chr17	+,-,-	TUBG1,FAM134C,FAM134C	-2925,-2787,-2787
chr6:108394171-108394535	chr6	+	108394332	108394582	True	NM_003269,NM_014028	chr6,chr6	+,-	NR2E1,OSTM1	92632,1409
chr15:41099966-41100503	chr15	+	41100012	41100370	True	NM_018163,NM_001077268	chr15,chr15	-,+	DNAJC17,ZFYVE19	-336,-789
chr11:125774490-125775001	chr11	+	125774752	125775014	True	NM_031307,NM_013264	chr11,chr11	-,+	PUS3,DDX25	-1636,-531
chr17:80419409-80419722	chr17	+	80419504	80419730	True	NM_001083608,NM_012336,NM_031968,NR_036519,NM_001038618	chr17,chr17,chr17,chr17,chr17	+,+,+,-,+	NARF,NARF,NARF,C17orf62,NARF	-3015,-3015,-3015,-10797,-3495
chr4:69059384-69060544	chr4	+	69059694	69059974	True	NR_015446,NM_001129907	chr4,chr4	+,-	FTLP10,TMPRSS11BNL	-11742,23874
chr17:33311756-33312395	chr17	+	33312086	33312440	True	NM_006584,NM_013975,NM_002311	chr17,chr17,chr17	-,+,+	CCT6B,LIG3,LIG3	-23558,-4620,-4620
chr15:41851754-41851967	chr15	+	41851843	41851911	True	NM_015540,NM_006293	chr15,chr15	-,+	RPAP1,TYRO3	-15379,-674
chr2:86830644-86831034	chr2	+	86830643	86831008	True	NM_022780,NM_001198951	chr2,chr2	+,-	RMND5A,RNF103	116405,20042
chr13:44206876-44208226	chr13	+	44206994	44208267	True	NM_001128303,NM_001127615	chr13,chr13	+,-	C13orf31,ENOX1	245152,-3381
chr5:153859438-153859653	chr5	+	153859438	153859552	True	NM_004821,NR_024084	chr5,chr5	-,+	HAND1,SAP30L	-1614,-33972
chr5:148521411-148521612	chr5	+	148521425	148521617	True	NM_024577,NM_014945	chr5,chr5	-,+	SH3TC2,ABLIM3	-78688,-422
chr6:71666918-71667118	chr6	+	71667028	71667162	True	NM_080742,NM_021940	chr6,chr6	-,+	B3GAT2,SMAP1	-240,-289600
chr16:84852619-84852852	chr16	+	84852676	84852886	True	NM_001145548,NM_031476	chr16,chr16	-,+	ZDHHC7,CRISPLD2	192305,700
chr3:169753626-169754892	chr3	+	169753723	169754480	True	NM_014373,NR_024409	chr3,chr3	+,-	GPR160,LOC100128164	1254,-69201
chr4:189657589-189659534	chr4	+	189657756	189659305	True	NM_173553,NR_033869	chr4,chr4	-,+	TRIML2,LOC401164	-631348,-281082
chr11:128862854-128864208	chr11	+	128862853	128863891	True	NM_000890,NM_014715	chr11,chr11	+,-	KCNJ5,ARHGAP32	-101594,30256
chr21:43640419-43640817	chr21	+	43640451	43640837	True	NM_207174,NM_004915,NM_003226,NM_016818,NM_207629	chr21,chr21,chr21,chr21,chr21	+,+,-,+,+	ABCG1,ABCG1,TFF3,ABCG1,ABCG1	-494,-1235,94919,-1235,-4315
chr17:47286652-47287490	chr17	+	47286701	47287383	True	NM_016428,NM_001135186,NM_001198755,NM_001198754,NM_001198756,NM_031498	chr17,chr17,chr17,chr17,chr17,chr17	+,+,-,-,-,-	ABI3,ABI3,GNGT2,GNGT2,GNGT2,GNGT2	205,205,61,605,61,42
chr14:70283969-70284594	chr14	+	70284041	70284303	True	NM_003049,NM_006925	chr14,chr14	-,+	SLC10A1,SRSF5	-20035,-50258
chr12:70004410-70004785	chr12	+	70004421	70004805	True	NM_201550,NM_001198842	chr12,chr12	-,+	LRRC10,CCT2	187,-25010
chr1:229477223-229477832	chr1	+	229477282	229477814	True	NM_145257,NM_006542	chr1,chr1	-,+	C1orf96,SPHAR	924,-37213
chr22:34319106-34320082	chr22	+	34319193	34319847	True	NM_133642,NM_000362,NM_004737	chr22,chr22,chr22	-,+,-	LARGE,TIMP3,LARGE	-2777,-1122442,-2777
chr19:1096194-1096846	chr19	+	1096503	1096676	True	NM_001039847,NM_002695,NM_002085,NM_001039848	chr19,chr19,chr19,chr19	+,-,+,+	GPX4,POLR2E,GPX4,GPX4	7259,-1112,7259,7972
chr6:119381917-119383678	chr6	+	119381969	119383557	True	NR_030315,NM_014034	chr6,chr6	-,+	MIR548B,ASF1A	6801,-166779
chr3:36987789-36988100	chr3	+	36987931	36988002	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	-1383,46838
chrX:13400758-13401561	chrX	+	13400776	13401570	True	NM_001167890,NM_001135995	chrX,chrX	+,-	EGFL6,ATXN3L	186123,-62258
chr18:47011374-47013329	chr18	+	47011478	47013248	True	NM_001199341,NM_001199356,NM_001199343,NM_001199355,NM_001199345,NM_001199344,NR_031720,NM_001035006,NM_001035005,NM_001199346,NM_000985,NM_001199342,NM_001199340,NR_002571,NR_002572,NR_002573,NR_003701	chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18	-,-,-,-,-,-,+,-,-,-,-,-,-,-,-,-,-	RPL17,RPL17-C18ORF32,RPL17,RPL17-C18ORF32,RPL17,RPL17,MIR1539,RPL17,C18orf32,C18orf32,RPL17,RPL17,RPL17,SNORD58A,SNORD58B,U58,SNORD58C	5637,5738,5637,4757,5738,5637,494,5738,447,447,5738,5637,5738,4520,4902,2481,2497
chr9:111695616-111695915	chr9	+	111695629	111695885	True	NM_017832,NM_003640	chr9,chr9	+,-	C9orf6,IKBKAP	787,773
chr19:894420-894652	chr19	+	894453	894663	True	NM_005481,NM_032551	chr19,chr19	-,+	MED16,KISS1R	-1235,22678
chr6:294497-295367	chr6	+	294704	295414	True	NM_020185,NM_148959	chr6,chr6	+,-	DUSP22,HUS1B	-2654,361600
chrX:48771094-48771548	chrX	+	48771098	48771365	True	NM_005660,NM_006875,NM_001167992,NM_001032289,NM_001042498	chrX,chrX,chrX,chrX,chrX	-,-,+,-,-	SLC35A2,PIM2,PQBP1,SLC35A2,SLC35A2	-2181,5099,-15381,-2165,-1863
chr7:45150842-45151286	chr7	+	45150859	45151285	True	NM_030900,NM_199122,NR_002990,NR_002919,NR_002991,NM_004749,NM_005856	chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,-,+	TBRG4,TBRG4,SNORA5B,SNORA5A,SNORA5C,TBRG4,RAMP3	82,82,-5161,-6778,-6218,82,46081
chr3:183417709-183418481	chr3	+	183417984	183418328	True	NM_024871,NM_018023	chr3,chr3	-,+	MAP6D1,YEATS2	125115,-2443
chr2:223161813-223162202	chr2	+	223161837	223162138	True	NM_013942,NM_153038,NM_181458,NM_001127366,NM_181459,NM_181457,NM_000438,NM_181461,NM_181460	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	-,+,-,-,-,-,-,-,-	PAX3,CCDC140,PAX3,PAX3,PAX3,PAX3,PAX3,PAX3,PAX3	1640,727,1640,1640,1640,1640,1640,1640,1640
chr17:61847626-61849296	chr17	+	61847725	61849024	True	NM_203499,NM_007372,NM_020198	chr17,chr17,chr17	+,+,-	DDX42,DDX42,CCDC47	2542,2542,2114
chr15:23806294-23807223	chr15	+	23806656	23807216	True	NM_005664,NM_019066	chr15,chr15	+,-	MKRN3,MAGEL2	3237,85827
chr17:1553072-1553482	chr17	+	1553203	1553517	True	NM_001163673,NR_028075,NM_031430,NR_028076,NM_145352,NM_145350,NM_003693	chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,-,-,-,-	WDR81,SCARF1,RILP,SCARF1,SCARF1,SCARF1,SCARF1	66299,-4162,-45,-4162,-4162,-4162,-4162
chr4:25158569-25159325	chr4	+	25158608	25159072	True	NR_037934,NM_016955	chr4,chr4	+,-	LOC285540,SEPSECS	3221,3182
chr4:10025255-10026374	chr4	+	10025362	10026404	True	NM_000798,NM_020041	chr4,chr4	+,-	DRD5,SLC2A9	-242156,-2248
chr12:64599992-64601880	chr12	+	64600026	64601732	True	NM_007235,NM_152440	chr12,chr12	+,-	XPOT,C12orf66	196420,14402
chr14:68194551-68195910	chr14	+	68194775	68195891	True	NM_016026,NM_152443	chr14,chr14	-,+	RDH11,RDH12	-32265,-26226
chrX:66917934-66918876	chrX	+	66917933	66918905	True	NM_001011645,NM_002547	chrX,chrX	+,-	AR,OPHN1	-129302,734444
chr7:31735204-31735515	chr7	+	31735216	31735553	True	NM_022728,NM_006658,NM_001145123	chr7,chr7,chr7	-,+,+	NEUROD6,C7orf16,C7orf16	-354678,-8637,-8637
chr11:65843251-65844104	chr11	+	65843554	65843862	True	NM_033036,NM_018026	chr11,chr11	-,+	GAL3ST3,PACS1	-26903,-5795
chrX:51150061-51150292	chrX	+	51150124	51150206	True	NM_018159,NM_153183	chrX,chrX	-,+	NUDT11,NUDT10	89303,-75092
chr10:43133201-43133801	chr10	+	43133412	43133784	True	NM_014753,NM_006955	chr10,chr10	+,-	BMS1,ZNF33B	144169,258
chr15:44963407-44964151	chr15	+	44963702	44964144	True	NM_025137,NM_004048,NM_001160227,NM_001145112	chr15,chr15,chr15,chr15	-,+,-,-	SPG11,B2M,SPG11,PATL2	-7826,39540,-7826,4992
chr12:52586611-52587263	chr12	+	52586721	52587285	True	NM_182507,NM_001081492,NR_027358	chr12,chr12,chr12	-,-,+	KRT80,KRT80,LOC283404	-937,-937,17428
chr1:75595159-75595529	chr1	+	75595181	75595569	True	NM_001001933,NM_001889	chr1,chr1	+,-	LHX8,CRYZ	-1113,-396089
chr12:31900837-31901325	chr12	+	31900946	31901187	True	NR_004854,NM_001135863	chr12,chr12	-,+	AMN1,METTL20	-18838,-88388
chr12:31900837-31901325	chr2	+	32254667	32254741	False	NM_032574,NM_014946	chr2,chr2	-,+	DPY30,SPAST	10153,33938
chr14:62229372-62229831	chr14	+	62229379	62229657	True	NM_001017970,NM_003082	chr14,chr14	-,+	TMEM30B,SNAPC1	-480849,-355
chr14:57091559-57092167	chr14	+	57091852	57092221	True	NM_017799,NM_172337	chr14,chr14	+,-	C14orf101,OTX2	-45392,180179
chr16:68678839-68679062	chr16	+	68678843	68679025	True	NM_018667,NM_001793	chr16,chr16	-,+	SMPD3,CDH3	-196434,-743
chr14:54419960-54420331	chr14	+	54419974	54420180	True	NM_130850,NM_001202,NM_130851,NM_001130851	chr14,chr14,chr14,chr14	-,-,-,+	BMP4,BMP4,BMP4,CDKN3	3424,3424,1140,443492
chr1:100507370-100508353	chr1	+	100507607	100508142	True	NM_033055,NM_194292	chr1,chr1	+,-	HIAT1,SASS6	-3874,90420
chrX:91035278-91035789	chrY	+	4869303	4870100	False	NM_032971,NR_001540	chrY,chrY	+,-	PCDH11Y,TTTY23	-1087,1241910
chrX:91035278-91035789	chrX	+	91035351	91035837	True	NM_032967,NM_004538	chrX,chrX	+,-	PCDH11X,NAP1L3	-1142,1892895
chr5:124229155-124231068	chr5	+	124229284	124230660	True	NM_004384,NM_020747	chr5,chr5	+,-	CSNK1G3,ZNF608	-1381542,-148479
chr8:48178635-48179800	chr8	+	48178662	48179547	True	NM_005195,NM_001080394	chr8,chr8	-,+	CEBPD,KIAA0146	471229,-5181
chr11:82448364-82449274	chr11	+	82448375	82449191	True	NM_145018,NM_175885	chr11,chr11	+,-	C11orf82,FAM181B	163545,-3469
chr19:46295022-46295271	chr19	+	46295174	46295238	True	NM_004943,NM_004409,NM_001081560,NM_004497,NM_001081562	chr19,chr19,chr19,chr19,chr19	-,-,-,+,-	DMWD,DMPK,DMPK,FOXA3,DMPK	872,-9359,-9359,72279,-9359
chr6:11029433-11030883	chr6	+	11029541	11030585	True	NM_017770,NM_001135575	chr6,chr6	-,+	ELOVL2,LOC221710	14089,63680
chr20:55202505-55202885	chr20	+	55202511	55202907	True	NM_080615,NM_003222	chr20,chr20	-,+	GCNT7,TFAP2C	-101530,1450
chr6:126109772-126111288	chr6	+	126110223	126111275	True	NM_001199620,NM_001199621,NM_016063,NM_181782,NM_001122842,NM_001199619	chr6,chr6,chr6,chr6,chr6,chr6	+,+,-,+,+,+	NCOA7,NCOA7,HDDC2,NCOA7,NCOA7,NCOA7	-7979,633,-486941,633,633,-7979
chr7:142644728-142644997	chr7	+	142644930	142645039	True	NM_019841,NM_178829	chr7,chr7	-,+	TRPV5,C7orf34	-14110,-8378
chr8:70383601-70385367	chr8	+	70383748	70385026	True	NM_015170,NM_001128204,NM_001146009	chr8,chr8,chr8	+,+,-	SULF1,SULF1,SLCO5A1	-4953,-4953,360428
chr1:21042595-21042960	chr1	+	21042790	21043008	True	NM_020816,NM_001122819,NM_032409	chr1,chr1,chr1	-,-,+	KIF17,KIF17,PINK1	1359,1359,-82893
chr10:11570073-11570889	chr10	+	11570363	11570729	True	NM_001080491,NM_024693	chr10,chr10	-,+	USP6NL,ECHDC3	3595,213626
chr14:55604371-55604880	chr14	+	55604386	55604808	True	NM_002306,NR_003225,NM_001146015,NM_001177388	chr14,chr14,chr14,chr14	+,+,-,+	LGALS3,LGALS3,DLGAP5,LGALS3	-8502,-736,53638,-8502
chr8:133108580-133109215	chr8	+	133108599	133109007	True	NM_015137,NM_001145095	chr8,chr8	+,-	EFR3A,HHLA1	-192308,8555
chr12:27613523-27615387	chr12	+	27613661	27615425	True	NM_001145010,NM_001146221	chr12,chr12	+,-	C12orf70,LOC100287284	4317,308834
chr1:44174785-44175440	chr1	+	44174890	44175055	True	NM_174963,NM_174964,NM_174965,NM_174966,NM_174967,NM_174968,NM_174969,NM_174971,NM_174970,NR_033827,NM_006279	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,+,+,+,+,-,+	ST3GAL3,ST3GAL3,ST3GAL3,ST3GAL3,ST3GAL3,ST3GAL3,ST3GAL3,ST3GAL3,ST3GAL3,LOC100132774,ST3GAL3	-1731,-1731,-1731,-1731,-1731,-1731,-1731,-1731,-1731,-1878,-1731
chr22:38404382-38405115	chr22	+	38404892	38405048	True	NM_006941,NM_001039583	chr22,chr22	-,+	SOX10,PICK1	-24353,48213
chr13:19923299-19924636	chr13	+	19923354	19924073	True	NR_034026,NR_027248	chr13,chr13	+,-	LOC100287114,ANKRD26P3	-4226,-4241
chr7:154863967-154864953	chr7	+	154863978	154864701	True	NM_007349,NM_024012	chr7,chr7	-,+	PAXIP1,HTR5A	-69296,-1484
chr12:8379692-8380191	chr12	+	8379692	8380134	True	NM_018088,NR_026788	chr12,chr12	-,+	FAM90A1,FAM66C	130,-46941
chr15:55880012-55880298	chr15	+	55880012	55880100	True	NM_001198784,NM_015617	chr15,chr15	+,-	FLJ27352,PYGO1	-179340,1000
chr2:175862750-175864524	chr2	+	175863202	175864227	True	NM_001025201,NM_024583,NM_001822	chr2,chr2,chr2	-,+,-	CHN1,SCRN3,CHN1	6000,-602797,6000
chrX:129037070-129038318	chrX	+	129037179	129038009	True	NM_001166221,NM_006649,NM_016032	chrX,chrX,chrX	+,+,-	UTP14A,UTP14A,ZDHHC9	2087,2087,-59269
chr12:112029808-112030509	chr12	+	112030201	112030321	True	NM_001136538,NM_002973	chr12,chr12	+,-	ACAD10,ATXN2	93535,7209
chr1:45274097-45275065	chr1	+	45274488	45275000	True	NM_001013632,NM_004073,NM_001136537	chr1,chr1,chr1	-,+,+	TCTEX1D4,PLK3,BTBD19	-1531,-8503,-385
chrX:153411283-153411977	chrX	+	153411428	153411988	True	NM_020061,NM_001110792	chrX,chrX	+,-	OPN1LW,MECP2	-1755,-48240
chrX:153411283-153411977	chrX	+	153449839	153450399	False	NM_001586,NM_000513,NM_001048181	chrX,chrX,chrX	-,+,+	TEX28,OPN1MW,OPN1MW2	73105,-1806,-1806
chrX:153411283-153411977	chrX	+	153486957	153487517	False	NM_001586,NM_000513,NM_001048181	chrX,chrX,chrX	-,+,+	TEX28,OPN1MW,OPN1MW2	35987,-1806,-1806
chr9:14315983-14316364	chr9	+	14316115	14316305	True	NM_005596,NR_003920,NM_001190737	chr9,chr9,chr9	-,+,-	NFIB,LOC389705,NFIB	-2070,677019,-2070
chr19:15589080-15590634	chr19	+	15589309	15590652	True	NM_173483,NM_052890,NR_031716	chr19,chr19,chr19	+,-,+	CYP4F22,PGLYRP2,MIR1470	28683,27,-29001
chr19:31640278-31640556	chr19	+	31640313	31640605	True	NM_020856,NR_026894	chr19,chr19	-,+	TSHZ3,DKFZp566F0947	199635,177
chr3:195346340-195346587	chr3	+	195346343	195346571	True	NM_001647,NR_003265	chr3,chr3	-,+	APOD,SDHAP2	-35267,38338
chr3:195346340-195346587	chr3	+	195452680	195452756	False	NM_001098516,NM_004532,NM_152673	chr3,chr3,chr3	+,-,+	MUC20,MUC4,MUC20	-1633,86442,-4978
chr3:99795914-99797639	chr3	+	99795950	99797178	True	NM_001167924,NM_182909	chr3,chr3	+,-	C3orf26,FILIP1L	36595,36229
chr9:133319509-133319755	chr9	+	133319567	133319791	True	NM_000050,NR_027440,NM_054012	chr9,chr9,chr9	+,-,+	ASS1,LOC100272217,ASS1	302,135140,302
chr6:24358725-24359844	chr6	+	24358757	24358817	True	NM_016356,NM_181337	chr6,chr6	-,+	DCDC2,KAAG1	-477,-1677
chr2:39005107-39006665	chr2	+	39005210	39006720	True	NM_001195446,NM_024775	chr2,chr2	-,+	SRSF7,GEMIN6	-26574,66
chr16:19463893-19464833	chr16	+	19464111	19464499	True	NM_024780,NM_016641	chr16,chr16	+,-	TMC5,GDE1	3272,69009
chr15:73386239-73386590	chr15	+	73386287	73386643	True	NM_002499,NM_005477	chr15,chr15	+,-	NEO1,HCN4	-41514,275016
chr8:19677105-19678646	chr8	+	19677114	19678628	True	NR_024040,NM_018142	chr8,chr8	-,+	CSGALNACT1,INTS10	-136853,-2259
chr15:49763402-49764098	chr15	+	49763840	49764146	True	NM_152647,NM_002009	chr15,chr15	-,+	C15orf33,FGF7	149022,-48531
chr13:50657507-50658308	chr13	+	50657776	50658225	True	NR_029485,NR_002605	chr13,chr13	-,+	MIR15A,DLEU1	-34439,-1419
chr13:101183678-101184270	chr13	+	101183686	101184289	True	NM_001178004,NM_033110	chr13,chr13	+,-	PCCA,A2LD1	-442477,1817
chr20:30539000-30539315	chr20	+	30539002	30539176	True	NM_030815,NM_001011718	chr20,chr20	-,+	PDRG1,XKR7	757,16628
chr4:39528389-39528777	chr4	+	39528391	39528707	True	NR_026854,NM_001184701,NM_001184700,NM_003359	chr4,chr4,chr4,chr4	+,-,-,-	LOC401127,UGDH,UGDH,UGDH	-46567,561,561,561
chr7:44880292-44881199	chr7	+	44880483	44880972	True	NM_201436,NM_012412,NM_201516,NM_201517,NM_021130,NM_138635	chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,+,-	H2AFV,H2AFV,H2AFV,H2AFV,PPIA,H2AFV	6814,6814,6814,6814,-44293,6814
chr12:107379519-107379785	chr12	+	107379518	107379832	True	NM_025198,NM_001033050,NM_152261	chr12,chr12,chr12	-,-,+	MTERFD3,MTERFD3,C12orf23	1147,1147,-30026
chr2:74274976-74275176	chr2	+	74275023	74275217	True	NM_144993,NM_001035505	chr2,chr2	+,-	TET3,BOLA3	-1624,99872
chr19:57896291-57897561	chr19	+	57896400	57897235	True	NM_001172773,NM_020633,NM_152909	chr19,chr19,chr19	+,-,+	ZNF548,VN1R1,ZNF548	3982,70928,3982
chr6:84418405-84418605	chr6	+	84418441	84418641	True	NR_026669,NM_014841,NM_001009994	chr6,chr6,chr6	-,-,+	SNAP91,SNAP91,RIPPLY2	536,536,144343
chr19:30303583-30303954	chr19	+	30303614	30303948	True	NM_001238,NM_057182,NM_031448	chr19,chr19,chr19	+,+,-	CCNE1,CCNE1,C19orf12	-764,-104,-97162
chr19:38917561-38918581	chr19	+	38918099	38918534	True	NM_170604,NM_001146204,NM_001146205,NM_001146206,NM_001146207,NM_001146202,NM_001146203,NM_000540,NM_001042723	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,+,+	RASGRP4,RASGRP4,RASGRP4,RASGRP4,RASGRP4,RASGRP4,RASGRP4,RYR1,RYR1	-1154,-1154,-1154,-1154,-1154,-1154,-1154,5805,5805
chr10:70944086-70944319	chr10	+	70944298	70944373	True	NM_001057,NM_003171	chr10,chr10	-,+	TACR2,SUPV3L1	232358,-4358
chr19:57860349-57861387	chr19	+	57860571	57861190	True	NM_020633,NM_020657	chr19,chr19	-,+	VN1R1,ZNF304	106968,1454
chr1:17091761-17091973	chr1	+	17091770	17091964	True	NR_002729,NR_037446	chr1,chr1	-,+	MST1P9,MIR3675	-795,-84071
chr1:17091761-17091973	chr1	-	234952967	234953017	False	NM_182972,NR_033927	chr1,chr1	-,+	IRF2BP2,NCRNA00184	-207696,-187961
chr19:55346259-55347507	chr19	+	55346373	55347505	True	NM_012314,NM_001127255	chr19,chr19	+,-	KIR2DS4,NLRP7	-2250,111418
chr7:66380504-66381455	chr7	+	66380648	66381143	True	NR_003934,NM_017994	chr7,chr7	-,+	LOC729156,C7orf42	-70835,5059
chr6:56970947-56971198	chr6	+	56970946	56971082	True	NM_183227,NM_015555	chr6,chr6	-,+	RAB23,ZNF451	115233,-16170
chr2:47358944-47360807	chr2	+	47358962	47360648	True	NM_020458,NM_001163561	chr2,chr2	+,-	TTC7A,C2orf61	-190700,21919
chr19:9240584-9242443	chr19	+	9240886	9241988	True	NM_001190791,NM_001001958,NM_020933	chr19,chr19,chr19	+,-,+	ZNF317,OR7G3,ZNF317	9067,-3260,9067
chr5:62076558-62077192	chr5	+	62076641	62077103	True	NM_181506,NM_014473	chr5,chr5	+,-	LRRC70,DIMT1L	-202130,-376913
chr11:104769541-104771056	chr11	+	104769567	104771020	True	NM_001077244,NR_034070,NR_034071,NR_034068,NR_034063,NR_034061,NM_001191016,NR_034067,NR_034066,NR_034065,NR_034064	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,-,-,-,-,-,-,-,-,-,-	GRIA4,CASP12,CASP12,CASP12,CASP12,CASP12,CASP12,CASP12,CASP12,CASP12,CASP12	709779,-170,-170,-170,-170,-170,-170,-170,-170,-170,-170
chr15:38561231-38561655	chr15	+	38561506	38561566	True	NM_152594,NM_001128602	chr15,chr15	+,-	SPRED1,RASGRP1	-16505,295491
chr1:249132231-249132437	chr1	+	249132253	249132367	True	NM_024836,NM_030645	chr1,chr1	+,-	ZNF672,SH3BP5L	162,-12099
chr19:46197146-46198020	chr19	+	46197253	46197704	True	NM_177542,NM_001163377,NM_017659,NM_004597	chr19,chr19,chr19,chr19	-,+,+,-	SNRPD2,QPCTL,QPCTL,SNRPD2	-1810,-1564,-1564,-1810
chr13:24155578-24156239	chr13	+	24155582	24156222	True	NM_001204458,NM_014363,NM_018647	chr13,chr13,chr13	+,-,+	TNFRSF19,SACS,TNFRSF19	-2134,-147741,-2134
chr3:111761384-111762958	chr3	+	111761625	111762750	True	NM_001042575,NR_026734,NM_001190259	chr3,chr3,chr3	+,+,-	TMPRSS7,TMPRSS7,GCET2	-3213,-3213,89452
chr14:35346244-35348046	chr14	+	35346484	35347687	True	NR_002937,NM_182648,NM_013448	chr14,chr14,chr14	+,-,-	C14orf19,BAZ1A,BAZ1A	61440,-1631,-1631
chr17:17683248-17683673	chr17	+	17683364	17683719	True	NM_030665,NR_024007	chr17,chr17	+,-	RAI1,SMCR5	-98630,-521
chr2:198321411-198322504	chr2	+	198321526	198322343	True	NM_025147,NM_001005526	chr2,chr2	+,-	COQ10B,SF3B1	-3348,-21755
chr7:1545862-1546098	chr7	+	1545881	1546145	True	NM_002360,NM_001080453	chr7,chr7	+,-	MAFK,INTS1	24222,-1863
chr19:10121062-10121737	chr19	+	10121118	10121526	True	NM_015719,NM_015725	chr19,chr19	-,+	COL5A3,RDH8	29,2398
chr1:149788605-149789061	chr1	+	149788908	149789028	True	NM_001024599,NM_001161334,NM_001123375,NM_001034077	chr1,chr1,chr1,chr1	-,-,-,+	HIST2H2BF,HIST2H2BF,HIST2H3D,HIST2H4B	-4980,-4980,-3672,15192
chr3:49850505-49851940	chr3	+	49850520	49851943	True	NM_003335,NM_203370	chr3,chr3	-,+	UBA7,C3orf54	75,-9884
chr3:193853730-193853945	chr3	+	193853831	193853953	True	NR_033944,NM_005524	chr3,chr3	-,+	LOC647323,HES1	-132383,7
chr3:197304033-197304461	chr3	+	197304037	197304346	True	NM_203315,NM_001011537	chr3,chr3	-,+	BDH1,FYTTD1	-3843,172077
chr17:44608641-44610391	chr17_ctg5_hap1	+	1466114	1466533	False	NR_002940,NM_016632	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LRRC37A4,ARL17A	14843,47416
chr17:44608641-44610391	chr17_ctg5_hap1	-	221064	221483	False	NM_001006607,NM_016632	chr17_ctg5_hap1,chr17_ctg5_hap1	-,+	LRRC37A2,ARL17A	19241,14648
chr17:44608641-44610391	chr17_ctg5_hap1	-	438999	439418	False	NM_001039083,NR_002940	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	ARL17B,LRRC37A4	-47453,-14884
chr17:44608641-44610391	chr17	+	44609252	44609671	True	NM_001006607,NM_016632	chr17,chr17	+,-	LRRC37A2,ARL17A	-19232,47482
chr17:44608641-44610391	chr17	+	44391668	44392095	False	NM_001103154,NM_014834	chr17,chr17	-,+	ARL17B,LRRC37A	47104,-19227
chr4:9495790-9497103	chr4	+	9496063	9496607	True	NR_031688,NM_001040448	chr4,chr4	-,+	MIR548I2,DEFB131	61380,-49854
chr5:35872459-35873632	chr5	+	35872790	35873616	True	NM_002185,NM_001042625	chr5,chr5	+,-	IL7R,CAPSL	-15861,65171
chr3:112137549-112138354	chr3	+	112137860	112137917	True	NM_005944,NM_001085357	chr3,chr3	+,-	CD200,BTLA	-86000,80546
chrX:24331820-24332031	chrX	+	24331831	24332029	True	NM_001136233,NM_001136234	chrX,chrX	-,+	FAM48B2,FAM48B1	-399,48848
chr20:32395008-32396162	chr20	+	32395022	32395572	True	NM_176812,NM_183397	chr20,chr20	+,-	CHMP4B,PXMP4	3537,-86886
chr18:48083959-48085802	chr18	+	48084243	48085660	True	NM_002747,NM_001127175	chr18,chr18	+,-	MAPK4,MRO	823,260824
chr1:64065205-64065842	chr1	+	64065535	64065772	True	NM_001172819,NM_014288,NM_002633	chr1,chr1,chr1	+,-,+	PGM1,ITGB3BP,PGM1	-6113,-76700,-6646
chr13:80915665-80916970	chr13	+	80915691	80916805	True	NM_019080,NM_005842	chr13,chr13	+,-	NDFIP2,SPRY2	-860484,-605
chr2:219905589-219906131	chr2	+	219905617	219906064	True	NM_194302,NM_152389,NR_024385	chr2,chr2,chr2	-,-,+	CCDC108,CCDC108,LOC151300	231,231,-64663
chr11:61717116-61717332	chr11	+	61717148	61717304	True	NM_001139443,NM_004183,NM_002032	chr11,chr11,chr11	+,+,-	BEST1,BEST1,FTH1	51,51,17884
chr17:1666439-1667398	chr17	+	1666562	1667168	True	NM_002615,NR_028505	chr17,chr17	+,-	SERPINF1,C17orf91	-1355,-46996
chr9:18487022-18487648	chr9	+	18487225	18487664	True	NM_153707,NM_001040272	chr9,chr9	-,+	FAM154A,ADAMTSL1	545645,-13183
chr13:114241531-114242072	chr13	+	114241547	114242119	True	NM_000705,NM_007111,NR_026580	chr13,chr13,chr13	-,+,+	ATP4B,TFDP1,TFDP1	70444,-2542,-2595
chr2:218809736-218809970	chr2	+	218809736	218809986	True	NR_034176,NM_022648	chr2,chr2	+,-	RUFY4,TNS1	89670,-940
chr1:144994892-144995748	chr1	+	144994965	144995789	True	NM_014644,NM_001195260,NM_001195261,NM_004892,NM_001002812,NM_001002810,NM_001198834	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,-,-	PDE4DIP,PDE4DIP,PDE4DIP,SEC22B,PDE4DIP,PDE4DIP,PDE4DIP	57,1372,117,100617,57,68,68
chrX:107225498-107225806	chrX	+	107225619	107225829	True	NM_001170553,NM_031273	chrX,chrX	+,-	VSIG1,TEX13B	62370,-19
chr22:35622188-35623225	chr22	+	35622267	35623243	True	NM_001003681,NM_005368	chr22,chr22	+,-	HMGXB4,MB	30201,390191
chr17:44344563-44344954	chr17_ctg5_hap1	+	1211721	1211771	False	NR_026901,NR_037772	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LOC644172,CRHR1	-23333,-41268
chr17:44344563-44344954	chr17_ctg5_hap1	-	521010	521408	False	NM_001193465,NM_014834	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	KIAA1267,LRRC37A	42089,-62406
chr17:44344563-44344954	chr17	+	44344583	44344981	True	NM_001193465,NM_014834	chr17,chr17	-,+	KIAA1267,LRRC37A	-41843,27515
chr17:40166276-40167583	chr17	+	40166531	40167563	True	NM_003315,NM_001144928,NM_001144766,NM_001144929,NR_029431,NM_017595,NM_001144927,NM_001001349	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,-,+,-,+,+,+	DNAJC7,NKIRAS2,DNAJC7,NKIRAS2,DNAJC7,NKIRAS2,NKIRAS2,NKIRAS2	2209,4523,1677,4523,2209,4523,4523,2030
chr8:144899622-144900071	chr8	+	144899646	144900120	True	NR_033849,NM_182706,NR_030633,NM_015356	chr8,chr8,chr8,chr8	+,-,-,-	LOC100128338,SCRIB,MIR937,SCRIB	-83387,-2097,-4434,-2097
chr2:233499753-233499985	chr2	+	233499803	233499951	True	NM_145702,NM_025202	chr2,chr2	-,+	TIGD1,EFHD1	-84577,-1647
chr19:55720815-55721088	chr19	+	55720824	55721036	True	NM_032430,NM_001161440,NM_002842	chr19,chr19,chr19	+,-,-	BRSK1,PTPRH,PTPRH	74497,44,44
chr9:115987001-115988337	chr9	+	115987004	115988049	True	NM_015258,NM_001859	chr9,chr9	-,+	FKBP15,SLC31A1	-3363,-3247
chr6:154424566-154424980	chr6	+	154424565	154424806	True	NM_001130699,NM_001145287	chr6,chr6	-,+	IPCEF1,OPRM1	226459,-16976
chr16:25707339-25707910	chr16	+	25707393	25707779	True	NM_001012981,NM_006040	chr16,chr16	-,+	ZKSCAN2,HS3ST4	-438538,-4104
chr17:79651548-79652013	chr17	+	79651627	79652019	True	NM_001040025,NM_004712	chr17,chr17	-,+	ARL16,HGS	-673,-716
chr7:132262079-132262281	chr7	+	132262084	132262282	True	NM_001037126,NM_001105543,NM_020911	chr7,chr7,chr7	+,-,-	EXOC4,PLXNA4,PLXNA4	675540,-761,-761
chr22:46402128-46402474	chr22	+	46402157	46402273	True	NM_058238,NR_027240	chr22,chr22	-,+	WNT7B,LOC730668	-29149,222
chr4:90830600-90832008	chr4	+	90830969	90831982	True	NM_001146055,NM_007351	chr4,chr4	-,+	SNCA,MMRN1	-71522,-14978
chr17:38257358-38257934	chr17	+	38257499	38257861	True	NM_001012241,NM_021724	chr17,chr17	+,-	MSL1,NR1D1	20928,-526
chr5:173132471-173132691	chr5	+	173132535	173132663	True	NR_027109,NM_138369	chr5,chr5	+,-	LOC285593,BOD1	-125929,-88869
chr7:6148202-6149325	chr7	+	6148476	6148969	True	NM_032172,NM_014413	chr7,chr7	+,-	USP42,EIF2AK1	-3987,-49616
chr3:13462729-13464204	chr3	+	13462751	13464157	True	NM_024827,NM_024923	chr3,chr3	+,-	HDAC11,NUP210	57557,-942
chr9:34473555-34474323	chr9	+	34474012	34474232	True	NM_012144,NM_147202	chr9,chr9	+,-	DNAI1,C9orf25	-15257,-15444
chr20:61993123-61993407	chr20	+	61993289	61993427	True	NM_020882,NM_000744	chr20,chr20	+,-	COL20A1,CHRNA4	-68802,-594
chr17:28803806-28804399	chr17	+	28803892	28804416	True	NM_001007024,NM_001007025,NM_206832,NM_004871	chr17,chr17,chr17,chr17	+,+,-,+	GOSR1,GOSR1,TMIGD1,GOSR1	9,9,-142827,9
chr21:10991212-10991720	chr21	+	10991316	10991448	True	NM_199260,NM_199261,NM_199259,NR_037458	chr21,chr21,chr21,chr21	-,-,-,+	TPTE,TPTE,TPTE,MIR3687	-396,-396,-396,-1165164
chr12:48116675-48116951	chr12	+	48116681	48116945	True	NM_001172439,NM_006025,NM_001172440,NM_017842	chr12,chr12,chr12,chr12	-,-,-,+	ENDOU,ENDOU,ENDOU,SLC48A1	2460,2460,2460,50021
chr1:149799724-149800025	chr1	+	149799871	149800026	True	NM_001005464,NM_001034077,NM_003548	chr1,chr1,chr1	-,+,+	HIST2H3A,HIST2H4B,HIST2H4A	12790,4194,4194
chr1:149799724-149800025	chr1	-	149836919	149837074	False	NM_021059,NM_001034077,NM_003548	chr1,chr1,chr1	+,-,-	HIST2H3C,HIST2H4B,HIST2H4A	-12790,-4194,-4194
chr13:79962321-79963094	chr13	+	79962520	79963125	True	NM_001161407,NM_022118	chr13,chr13	+,-	NDFIP2,RBM26	92133,16857
chr16:20340310-20341759	chr16	+	20340437	20341342	True	NM_017888,NM_001502,NM_001007240,NM_001007241,NM_001007242	chr16,chr16,chr16,chr16,chr16	+,-,-,-,-	ACSM5,GP2,GP2,GP2,GP2	79513,-1602,-1602,-1602,-1602
chr7:72502167-72502902	chr7	+	72502469	72502591	True	NR_003614,NR_003664	chr7,chr7	+,-	PMS2L2,SPDYE8P	-25840,-2160
chr7:72502167-72502902	chr7	-	99901464	99901514	False	NM_001004351,NR_028038	chr7,chr7	+,-	SPDYE3,GATS	3810,-31609
chr7:72502167-72502902	chr7	+	76663857	76663907	False	NM_006682,NR_028058	chr7,chr7	-,+	FGL2,LOC100132832	165293,4889
chr7:72502167-72502902	chr7	-	74934250	74934372	False	NR_003614,NR_003664	chr7,chr7	-,+	PMS2L2,SPDYE8P	53893,2160
chr7:72502167-72502902	chr7	-	74962275	74962397	False	NR_003614,NR_003664	chr7,chr7	-,+	PMS2L2,SPDYE8P	25868,2162
chr4:154603114-154603526	chr4	+	154603136	154603532	True	NM_173662,NM_003264	chr4,chr4	-,+	RNF175,TLR2	77913,1908
chr7:80534911-80536617	chr7	+	80534957	80536605	True	NM_006379,NM_001127444	chr7,chr7	-,+	SEMA3C,CD36	12113,-259258
chr6:57181439-57181777	chr6	+	57181457	57181767	True	NM_016277,NM_000947	chr6,chr6	-,+	RAB23,PRIM2	-94379,654
chr4:49305325-49306494	chr4	+	49305745	49305809	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-317531,-396930
chr4:49305325-49306494	chr4	+	49293457	49293521	False	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-305243,-384642
chr4:49305325-49306494	chr4	+	49299609	49299673	False	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-311395,-390794
chrX:57006124-57007352	chrX	+	57006317	57007358	True	NR_027139,NR_015367	chrX,chrX	-,+	SPIN3,LOC550643	14688,-250657
chr20:43989337-43990264	chr20	+	43989753	43990075	True	NM_033542,NR_003189,NM_001099791,NM_002999,NM_001197129	chr20,chr20,chr20,chr20,chr20	+,+,+,-,+	SYS1,SYS1-DBNDD2,SYS1,SDC4,SYS1	1664,1733,1664,-12689,501
chr18:59997856-59998159	chr18	+	59997867	59998111	True	NM_176787,NM_003839	chr18,chr18	-,+	PIGN,TNFRSF11A	-143578,-5370
chr4:87765070-87767036	chr4	+	87765386	87767064	True	NM_001166693,NM_197965	chr4,chr4	+,-	AFF1,SLC10A6	89089,3402
chr17:1643844-1644294	chr17	+	1643952	1644026	True	NM_001165921,NM_001165920,NM_000934,NR_028505	chr17,chr17,chr17,chr17	+,+,+,-	SERPINF2,SERPINF2,SERPINF2,C17orf91	2103,2293,2103,-24386
chr1:26874380-26874778	chr1	+	26874580	26874796	True	NM_001006665,NR_031740,NM_173574	chr1,chr1,chr1	+,+,-	RPS6KA1,MIR1976,ZNF683	-2288,6236,-175314
chr7:100239961-100240539	chr7	+	100239962	100240239	True	NM_003227,NM_023948	chr7,chr7	-,+	TFR2,MOSPD3	-789,-29899
chr22:24663425-24664191	chr22	+	24663717	24664202	True	NM_001145468,NM_015330,NM_004121	chr22,chr22,chr22	+,+,-	SPECC1L,SPECC1L,GGT5	2583,2583,-22607
chr15:30917699-30918226	chr15	+	30917752	30918071	True	NM_148911,NM_001039841	chr15,chr15	-,+	CHRFAM7A,ARHGAP11B	-231888,807
chr15:30917699-30918226	chr15	+	32907136	32907186	False	NM_014783,NM_199357,NR_036650	chr15,chr15,chr15	+,+,-	ARHGAP11A,ARHGAP11A,LOC100288615	504,504,-81194
chr3:19972510-19972945	chr3	+	19972705	19972975	True	NM_144715,NM_004162	chr3,chr3	-,+	EFHB,RAB5A	2781,15596
chr12:22697690-22698476	chr12	+	22697722	22698265	True	NM_014802,NM_001039481	chr12,chr12	-,+	KIAA0528,ETNK1	-270,79810
chr2:42395992-42396524	chr2	+	42396073	42396245	True	NM_019063,NM_001145076,NM_004718	chr2,chr2,chr2	+,+,-	EML4,EML4,COX7A2L	244,244,192161
chr4:47822073-47823174	chr4	+	47822120	47822830	True	NM_006587,NM_207330	chr4,chr4	-,+	CORIN,NIPAL1	17287,195960
chr1:115623121-115623380	chr1	+	115623187	115623373	True	NM_000549,NM_005725	chr1,chr1	+,-	TSHB,TSPAN2	-50836,8798
chr1:1246882-1247232	chr1	+	1246941	1247075	True	NM_030649,NM_153339	chr1,chr1	-,+	ACAP3,PUSL1	-3672,-2998
chr1:223745232-223745533	chr1	+	223745240	223745518	True	NM_001146068,NM_001143962	chr1,chr1	+,-	CAPN2,CAPN8	143776,107968
chr1:223745232-223745533	chr9	+	138944798	138945014	False	NM_015597,NM_144653	chr9,chr9	+,-	GPSM1,NACC2	276917,42167
chr19:51726433-51728295	chr19	+	51726586	51727958	True	NM_001177608,NM_001772,NM_145232,NM_001082618	chr19,chr19,chr19,chr19	+,+,-,+	CD33,CD33,CTU1,CD33	376,376,-114939,376
chr2:118586439-118588079	chr2	+	118586453	118588004	True	NM_019044,NM_006773	chr2,chr2	-,+	CCDC93,DDX18	183792,-14256
chr6:116605000-116605854	chr6	+	116605164	116605671	True	NM_003309,NM_001080976	chr6,chr6	-,+	TSPYL1,DSE	-3884,-3941
chr10:50385464-50386281	chr10	+	50385677	50386193	True	NM_001010863,NM_001135196	chr10,chr10	-,+	C10orf128,C10orf71	10264,120993
chr22:25091726-25092207	chr22	+	25091800	25092256	True	NR_024593,NR_024494	chr22,chr22	-,+	POM121L10P,BCRP3	-36686,-62969
chr3:13005856-13006841	chr3	+	13006073	13006741	True	NM_014869,NM_012298	chr3,chr3	-,+	IQSEC1,CAND2	2269,-167953
chr12:21613905-21615746	chr12	+	21614043	21615698	True	NM_002907,NM_024854	chr12,chr12	-,+	RECQL,PYROXD1	38963,-23566
chr2:101092181-101092524	chr2	+	101092505	101092577	True	NM_004854,NM_001011717	chr2,chr2	-,+	CHST10,NMS	-58375,-5612
chr7:100450614-100450985	chr7	+	100450618	100451023	True	NM_020246,NM_004444	chr7,chr7	+,-	SLC12A9,EPHB4	-311,-25475
chr10:74655411-74656872	chr10	+	74655588	74656602	True	NM_152635,NM_032562	chr10,chr10	+,-	OIT3,PLA2G12B	-2309,57970
chr3:112280937-112281630	chr3	+	112280986	112281556	True	NM_022488,NM_017945	chr3,chr3	-,+	ATG3,SLC35A5	-501,-142
chr15:51387667-51388808	chr15	+	51387792	51388636	True	NR_027642,NM_207381	chr15,chr15	+,-	LOC100132724,TNFAIP8L3	-151524,8887
chr5:40798527-40799152	chr5	+	40798609	40799168	True	NM_032587,NM_006251,NM_206907	chr5,chr5,chr5	+,-,-	CARD6,PRKAA1,PRKAA1	42241,-312,-312
chr2:11053089-11053876	chr2	+	11053113	11053813	True	NM_005742,NM_002236	chr2,chr2	-,+	PDIA6,KCNF1	-100153,-1101
chr5:64920878-64922485	chr5	+	64920975	64922250	True	NM_024941,NM_001656,NM_033228,NM_001093756,NM_033227,NR_003545,NM_001093755	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,-,-,+,-,+,+	C5orf44,TRIM23,TRIM23,C5orf44,TRIM23,C5orf44,C5orf44	-468,-788,-788,-468,-788,-468,-468
chr11:43383862-43385562	chr11	+	43383969	43385554	True	NM_018259,NR_033868	chr11,chr11	+,-	TTC17,LOC399881	-3585,-93050
chr14:58623031-58623742	chr14	+	58623072	58623490	True	NM_018477,NM_001001872	chr14,chr14	+,-	ACTR10,C14orf37	43342,-4225
chr6:125474842-125475441	chr6	+	125475162	125475476	True	NM_016063,NM_003287,NM_001003396,NM_001003397,NM_001003395	chr6,chr6,chr6,chr6,chr6	-,+,+,+,+	HDDC2,TPD52L1,TPD52L1,TPD52L1,TPD52L1	147856,-334,-334,-334,-57
chr15:93116267-93116614	chr15	+	93116354	93116612	True	NR_021493,NM_153040	chr15,chr15	-,+	LOC100144604,C15orf32	-861,-101504
chr10:104156533-104157742	chr10	+	104156657	104157747	True	NM_001077493,NM_002502,NM_002779,NM_001077494	chr10,chr10,chr10,chr10	+,+,-,+	NFKB2,NFKB2,PSD,NFKB2	-2479,-1276,21204,-2369
chr19:15752865-15754838	chr19	+	15753062	15754880	True	NM_000896,NM_001199208,NM_001199209,NR_033864	chr19,chr19,chr19,chr19	+,+,+,-	CYP4F3,CYP4F3,CYP4F3,CYP4F24P	-1406,-1406,-1406,135968
chr11:15136186-15136454	chr11	+	15136269	15136491	True	NM_001031853,NM_001741,NM_001042536	chr11,chr11,chr11	+,-,+	INSC,CALCA,INSC	-2350,-142437,-8
chr19:49199313-49199623	chr19	+	49199358	49199610	True	NM_001097638,NM_000511,NM_182574	chr19,chr19,chr19	+,+,-	FUT2,FUT2,MAMSTR	-181,-181,20654
chr18:77161277-77161527	chr18	+	77161284	77161432	True	NM_006162,NM_172388,NM_172389,NM_172387,NM_001146343,NM_172390	chr18,chr18,chr18,chr18,chr18,chr18	+,+,+,+,-,+	NFATC1,NFATC1,NFATC1,NFATC1,PQLC1,NFATC1	-5563,-5563,-1009,-1009,550271,-5563
chr5:110076575-110077341	chr5	+	110076731	110077363	True	NM_001039763,NM_138773	chr5,chr5	-,+	TMEM232,SLC25A46	-14281,-2028
chr15:89455975-89456357	chr15	+	89455981	89456229	True	NM_013227,NM_001114614,NM_005928	chr15,chr15,chr15	+,-,-	ACAN,MFGE8,MFGE8	-109358,484,484
chr11:6265395-6266456	chr11	+	6265476	6266488	True	NM_001037329,NM_032127,NM_001098794	chr11,chr11,chr11	+,-,-	CNGA4,FAM160A2,FAM160A2	-5197,-9535,-9535
chr1:171078976-171079976	chr1	+	171078975	171079932	True	NR_031627,NM_006894	chr1,chr1	-,+	MIR1295,FMO3	-8028,-19010
chr6:3043734-3043977	chr6	+	3043733	3043869	True	NR_033884,NM_003804	chr6,chr6	-,+	LOC401233,RIPK1	-18728,33188
chr9:33444319-33444903	chr9	+	33444641	33444895	True	NM_004925,NM_002504	chr9,chr9	-,+	AQP3,NFX1	2745,-154274
chr1:86920329-86921808	chr1	+	86920839	86921584	True	NM_001285,NM_020729	chr1,chr1	+,-	CLCA1,ODF2L	12941,-58814
chr16:14421895-14422761	chr16	+	14422072	14422565	True	NR_029854,NM_001134477	chr16,chr16	+,-	MIR365-1,PARN	-18981,301606
chr8:48651572-48651809	chr8	+	48651608	48651851	True	NM_005914,NM_005195	chr8,chr8	+,-	MCM4,CEBPD	220911,-882
chr5:10759957-10760847	chr5	+	10760255	10760845	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-195879,592
chr8:145730094-145730398	chr8	+	145730138	145730444	True	NM_032902,NM_005309,NM_004260,NM_138431	chr8,chr8,chr8,chr8	+,+,-,+	PPP1R16A,GPT,RECQL4,MFSD3	-8080,-724,12816,4107
chr12:123380663-123381601	chr12	+	123380834	123381602	True	NM_003959,NM_024667	chr12,chr12	+,-	HIP1R,VPS37B	-60846,-122
chr14:70234250-70234579	chr14	+	70234261	70234627	True	NM_001039465,NR_029378,NM_006925	chr14,chr14,chr14	+,-,+	SRSF5,LOC100289511,SRSF5	-483,11,-478
chr7:45025968-45026314	chr7	+	45025967	45026249	True	NR_002952,NR_003697,NM_033054,NR_030770	chr7,chr7,chr7,chr7	-,-,-,+	SNORA9,C7orf40,MYO1G,CCM2	-858,60,-7263,13095
chr7:105174441-105174674	chr7	+	105174441	105174524	True	NM_021930,NM_019042	chr7,chr7	+,-	RINT1,PUS7	-1971,-11756
chr8:22222638-22223194	chr8	+	22222986	22223191	True	NM_015359,NM_001128431,NR_029714,NM_001135154,NM_001135153	chr8,chr8,chr8,chr8,chr8	+,+,-,+,+	SLC39A14,SLC39A14,MIR320A,SLC39A14,SLC39A14	1570,1570,-120430,1570,1858
chr4:89514070-89514291	chr4	+	89514071	89514297	True	NM_032906,NM_014606	chr4,chr4	-,+	PIGY,HERC3	-69116,-475
chr12:52701419-52701969	chr12	+	52701508	52701756	True	NM_002284,NM_002282	chr12,chr12	+,-	KRT86,KRT83	-5917,13478
chr11:24562721-24564585	chr11	+	24562850	24564252	True	NM_001009909,NM_001195637	chr11,chr11	+,-	LUZP2,LOC100500938	-44345,-1680878
chrX:133507895-133508180	chrX	+	133507996	133508212	True	NM_032458,NM_001015877,NM_032335,NR_030587	chrX,chrX,chrX,chrX	+,+,+,-	PHF6,PHF6,PHF6,MIR450B	-706,-706,-706,166134
chr3:52565972-52566347	chr3	+	52566005	52566371	True	NM_001124767,NM_001134231,NM_022908	chr3,chr3,chr3	+,-,-	C3orf78,NT5DC2,NT5DC2	4249,1472,2772
chr2:109002563-109004411	chr2	+	109002763	109004141	True	NR_024439,NM_006588	chr2,chr2	-,+	LOC729121,SULT1C4	-560180,-8393
chr10:121492102-121493704	chr10	+	121492496	121493746	True	NM_003252,NM_014937,NR_003251	chr10,chr10,chr10	-,+,+	TIAL1,INPP5F,INPP5F	-135955,-6943,-6943
chr4:47791961-47792285	chr4	+	47792053	47792228	True	NM_006587,NM_207330	chr4,chr4	-,+	CORIN,NIPAL1	47884,226562
chr9:132815249-132815773	chr9	+	132815490	132815758	True	NM_001136557,NM_015033,NM_020960,NM_001136558	chr9,chr9,chr9,chr9	+,-,+,+	GPR107,FNBP1,GPR107,GPR107	226,-10017,226,226
chr5:95194627-95196354	chr5	+	95194705	95196116	True	NR_026936,NM_002064	chr5,chr5	+,-	C5orf27,GLRX	-6820,-36128
chr3:101397494-101398207	chr6	+	42922771	42923000	False	NM_018960,NM_000287	chr6,chr6	+,-	GNMT,PEX6	5499,24032
chr3:101397494-101398207	chr3	+	101397715	101397944	True	NM_000986,NR_024407,NM_014415	chr3,chr3,chr3	-,+,-	RPL24,LOC100009676,ZBTB11	7670,-2492,-1727
chr14:99182363-99183943	chr14	+	99182493	99183879	True	NM_022898,NM_182560	chr14,chr14	-,+	BCL11B,C14orf177	553993,-4594
chr6:88854000-88855467	chr6	+	88854099	88855427	True	NM_033181,NM_030960,NM_001160260	chr6,chr6,chr6	-,+,-	CNR1,SPACA1,CNR1	-77,-96643,5505
chr16:2013471-2014234	chr16	+	2013674	2014218	True	NR_003142,NM_174903,NM_005061,NM_002952,NR_002327,NR_002326,NM_006453,NR_003020,NM_004548	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,-,-,-,-,+,+,+	SNHG9,RNF151,RPL3L,RPS2,SNORA10,SNORA64,TBL3,SNORA78,NDUFB10	778,2656,-8995,659,-1207,-567,7845,966,-4211
chr9:139268271-139268759	chr9	+	139268384	139268728	True	NM_052813,NM_001200003,NM_052814	chr9,chr9,chr9	-,+,-	CARD9,GPSM1,CARD9	-251,-19183,-251
chr10:50969459-50969680	chr10	+	50969544	50969712	True	NM_001143997,NM_001143996,NM_182554,NM_018245	chr10,chr10,chr10,chr10	-,-,+,-	OGDHL,OGDHL,C10orf53,OGDHL	763,763,-81919,763
chr13:115048788-115049558	chr13	+	115049081	115049486	True	NM_080687,NM_007368,NM_023011	chr13,chr13,chr13	+,-,+	UPF3A,RASA3,UPF3A	-2086,-150986,-2086
chr17:10560643-10560859	chr17	+	10560723	10560849	True	NM_002470,NM_020233	chr17,chr17	-,+	MYH3,C17orf48	-1258,40077
chr16:54319243-54319479	chr16	+	54319346	54319414	True	NM_001080432,NM_024336	chr16,chr16	+,-	FTO,IRX3	-581522,1014
chr22:38199855-38200219	chr22	+	38199991	38200137	True	NM_138797,NM_014291,NM_005318,NM_001171690	chr22,chr22,chr22,chr22	-,+,+,+	ANKRD54,GCAT,H1F0,GCAT	40266,3774,976,3774
chr20:47834053-47834569	chr20	+	47834052	47834198	True	NM_017454,NM_017895	chr20,chr20	-,+	STAU1,DDX27	-29148,1633
chr1:47067938-47069645	chr1	+	47068098	47069562	True	NM_198973,NM_001145474,NM_003684,NR_024174,NM_001135553,NR_024176	chr1,chr1,chr1,chr1,chr1,chr1	-,+,-,-,-,-	MKNK1,C1orf223,MKNK1,MKNK1,MKNK1,MKNK1	455,67937,455,455,455,455
chr1:1207944-1208172	chr1	+	1207952	1208200	True	NR_037668,NM_194458,NM_194315,NM_194457,NM_001130413,NM_058167	chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,-,+,-	SCNN1D,UBE2J2,UBE2J2,UBE2J2,SCNN1D,UBE2J2	2437,1084,1084,1084,2437,1084
chrX:146998529-147000033	chrX	+	146998631	147000061	True	NR_033699,NR_033700,NR_024501,NR_024500,NR_024503,NR_024502,NR_024499,NM_002024,NM_001185076,NM_001185075,NM_001185082,NM_001185081	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,-,-,-,-,-,+,+,+,+,+	FMR1,FMR1,FMR1-AS1,FMR1-AS1,FMR1-AS1,FMR1-AS1,FMR1-AS1,FMR1,FMR1,FMR1,FMR1,FMR1	-5226,-5226,3665,3665,3665,3665,3665,-5226,-5226,-5226,-5226,-5226
chr12:21810763-21811189	chr12	+	21810801	21811086	True	NM_030572,NM_002300,NM_001174097	chr12,chr12,chr12	+,-,-	C12orf39,LDHB,LDHB	-131596,-12,-73
chr7:131018386-131019030	chr7	+	131018665	131019055	True	NM_001018111,NM_013255	chr7,chr7	-,+	PODXL,MKLN1	222371,-6130
chr17:77769294-77770094	chr17	+	77769309	77770131	True	NM_005189,NM_020649	chr17,chr17	+,-	CBX2,CBX8	-17383,834
chr15:49309306-49310879	chr15	+	49309305	49310904	True	NM_001001556,NM_001193489	chr15,chr15	+,-	GALK2,SECISBP2L	137071,27914
chr13:24467135-24468313	chr13	+	24467187	24468286	True	NM_001135816,NM_005932,NM_001014442,NM_001007537	chr13,chr13,chr13,chr13	+,-,+,-	PCOTH,MIPEP,PCOTH,C1QTNF9B	-3646,-3600,-4210,2897
chr13:24467135-24468313	chr13	-	24893009	24893067	False	NM_178540,NM_006437	chr13,chr13	+,-	C1QTNF9,PARP4	-9352,193939
chr6:151810991-151811318	chr6	+	151810996	151811056	True	NM_025059,NM_017909	chr6,chr6	+,-	C6orf97,RMND1	4118,-37680
chr4:2467137-2467749	chr4	+	2467158	2467764	True	NM_001172657,NM_001185010,NM_002938,NM_001185009	chr4,chr4,chr4,chr4	-,+,+,+	ZFYVE28,RNF4,RNF4,RNF4	-46788,3030,3030,3415
chrX:48815704-48816077	chrX	+	48815713	48815785	True	NM_001167992,NM_001136159,NM_001136158,NM_001136157,NM_017602	chrX,chrX,chrX,chrX,chrX	+,-,-,-,-	PQBP1,OTUD5,OTUD5,OTUD5,OTUD5	-59989,-65,-820,-820,-820
chr14:102787165-102787576	chr14	+	102787172	102787532	True	NM_014226,NM_018335	chr14,chr14	-,+	RAGE,ZNF839	-15641,-1127
chr13:102100534-102102270	chr13	+	102100557	102102296	True	NM_052867,NM_004791	chr13,chr13	-,+	NALCN,ITGBL1	-31744,2669
chr11:60737717-60737990	chr11	+	60737723	60737951	True	NR_027391,NM_006725	chr11,chr11	-,+	SLC15A3,CD6	-18466,1163
chr1:147230148-147230746	chr1	+	147230173	147230766	True	NM_005267,NM_181703	chr1,chr1	+,-	GJA8,GJA5	144179,1999
chrX:12993915-12994527	chrX	+	12993952	12994264	True	NM_183049,NM_021109,NR_030727	chrX,chrX,chrX	+,+,-	TMSL3,TMSB4X,LOC349408	-780,-779,-32533
chr2:46848402-46849228	chr2	+	46848401	46849162	True	NM_173074,NM_002643,NM_014171	chr2,chr2,chr2	-,-,+	PIGF,PIGF,CRIPT	-4150,-4150,-4127
chr5:36228811-36229784	chr5	+	36229408	36229808	True	NM_001085411,NM_032637	chr5,chr5	-,+	C5orf33,SKP2	12142,-77277
chr1:44460203-44462021	chr1	+	44460911	44462061	True	NM_152499,NM_006934	chr1,chr1	+,-	CCDC24,SLC6A9	-3682,20986
chr12:32275277-32276549	chr12	+	32275692	32276485	True	NM_001714,NM_001013699	chr12,chr12	+,-	BICD1,H3F3C	-15570,-330517
chr21:26935232-26937107	chr21	+	26935231	26936818	True	NR_024092,NR_001458,NR_030784	chr21,chr21,chr21	-,+,+	C21orf71,MIR155HG,MIR155	18768,-836,9473
chr1:46934259-46935408	chr1	+	46934276	46935420	True	NM_147192,NM_001097611	chr1,chr1	+,-	DMBX1,KNCN	37247,81517
chr7:6774167-6775302	chr7	+	6774166	6774994	True	NR_002217,NM_016265	chr7,chr7	+,-	PMS2CL,ZNF12	-39,-27600
chr7:97883195-97883928	chr7	+	97883359	97883975	True	NM_015395,NM_015379	chr7,chr7	-,+	TECPR1,BRI3	-1891,27003
chr8:16880342-16881387	chr8	+	16880423	16881125	True	NM_181723,NM_019851	chr8,chr8	+,-	EFHA2,FGF20	3621,-20749
chr5:145586302-145586739	chr5	+	145586660	145586772	True	NM_020117,NM_018989	chr5,chr5	-,+	LARS,RBM27	-24366,-3555
chr2:198317089-198317882	chr2	+	198317227	198317859	True	NM_025147,NM_001005526	chr2,chr2	+,-	COQ10B,SF3B1	371,-17456
chr3:167042297-167043264	chr3	+	167042342	167042968	True	NM_001122752,NM_001199202	chr3,chr3	+,-	SERPINI1,ZBBX	410463,55153
chr5:88202429-88203752	chr7	-	66796950	66798030	False	NM_022906,NR_022007	chr7,chr7	+,-	STAG3L4,PMS2P4	-29390,-29544
chr5:88202429-88203752	chr5	+	88202473	88203555	True	NM_001193347,NM_006467,NM_001131005	chr5,chr5,chr5	-,+,-	MEF2C,POLR3G,MEF2C	-2551,1567125,-2551
chr5:175793715-175794101	chr5	+	175793808	175794009	True	NM_173664,NM_001079685,NM_001079684,NM_020444	chr5,chr5,chr5,chr5	+,-,-,-	ARL10,KIAA1191,KIAA1191,KIAA1191	-1360,-4999,-4999,-4999
chr19:46173129-46173379	chr19	+	46173224	46173296	True	NM_000164,NR_037512,NR_030372	chr19,chr19,chr19	+,-,+	GIPR,MIR642B,MIR642A	-1773,5020,4889
chr8:125490703-125491006	chr8	+	125490868	125490963	True	NM_001146160,NM_007218	chr8,chr8	-,+	TATDN1,RNF139	60417,-3914
chr6:44096421-44096959	chr6	+	44096696	44096788	True	NM_018426,NM_032111	chr6,chr6	+,-	TMEM63B,MRPL14	-1371,-1505
chr13:115078151-115079043	chr13	+	115078747	115078957	True	NM_001164145,NM_001164144,NM_007368	chr13,chr13,chr13	+,+,-	ZNF828,ZNF828,RASA3	1007,1007,-180652
chr16:2687730-2687960	chr16	+	2687879	2688009	True	NR_024492,NM_031948	chr16,chr16	+,-	FLJ42627,PRSS27	973,82593
chr16:2687730-2687960	chr16	-	2612184	2612314	False	NR_036139,NM_031268	chr16,chr16	-,+	MIR3178,PDPK1	-30178,-24265
chrX:13397002-13397258	chr21	+	28515989	28516281	False	NR_024357,NM_007038	chr21,chr21	+,-	NCRNA00113,ADAMTS5	578416,-176550
chrX:13397002-13397258	chr3	+	49395145	49395486	False	NM_201397,NM_022171,NM_000581	chr3,chr3,chr3	-,+,-	GPX1,TCTA,GPX1	634,54152,634
chrX:13397002-13397258	chrX	+	13397108	13397240	True	NM_001167890,NM_001135995	chrX,chrX	+,-	EGFL6,ATXN3L	190453,-58590
chr12:6978941-6979317	chr12	+	6979016	6979328	True	NM_032641,NM_000365,NM_001146316,NR_027483,NM_001159287	chr12,chr12,chr12,chr12,chr12	-,+,-,+,+	SPSB2,TPI1,SPSB2,TPI1,TPI1	3243,-2374,3171,-1789,-2483
chr3:145969546-145970463	chr3	+	145969594	145970440	True	NM_001177304,NM_001128306,NR_033439,NR_033438,NM_003412,NM_020353	chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,+,-	PLSCR4,PLSCR4,PLSCR4,PLSCR4,ZIC1,PLSCR4	-628,-628,-943,-628,1156740,-628
chr11:134126670-134127287	chr11	+	134126669	134127231	True	NM_001037304,NM_001037305,NM_199297,NM_014384,NM_014174,NM_199298	chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,+,-,-	THYN1,THYN1,THYN1,ACAD8,THYN1,THYN1	-3409,-3409,-3409,-3293,-3409,-3409
chr20:18773427-18774666	chr20	+	18773538	18774643	True	NR_026883,NR_026884,NR_026885	chr20,chr20,chr20	-,-,+	HSPC072,HSPC072,LOC100270804	635,33,49
chr11:76837400-76838017	chr11	+	76837448	76837910	True	NM_182833,NM_001127179,NM_000260,NM_001127180	chr11,chr11,chr11,chr11	-,+,+,+	GDPD4,MYO7A,MYO7A,MYO7A	160603,1399,1399,1405
chr19:58143848-58144582	chr19	+	58143850	58144631	True	NM_198855,NM_017879,NM_006385	chr19,chr19,chr19	+,-,+	ZNF211,ZNF416,ZNF211	38,-53607,38
chr17:17876994-17877776	chr17	+	17877092	17877687	True	NM_001130090,NM_001130091,NM_001130092,NM_001033551,NM_031294,NM_001082968	chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,-,+,-	LRRC48,LRRC48,LRRC48,TOM1L2,LRRC48,TOM1L2	-1025,-1025,-1025,-1308,-1025,-1308
chr3:57324224-57325599	chr3	+	57324423	57325608	True	NM_012096,NM_001142733	chr3,chr3	+,-	APPL1,ASB14	-62709,1154
chr19:53362111-53363256	chr19	+	53362373	53363140	True	NM_199132,NM_152473,NM_001008801	chr19,chr19,chr19	-,+,-	ZNF468,HERV-V1,ZNF468	-1471,154203,-1471
chr15:75039353-75041349	chr15	+	75039711	75041265	True	NM_000499,NM_000761	chr15,chr15	-,+	CYP1A1,CYP1A2	-21834,50
chr19:54324448-54325677	chr19	+	54325042	54325610	True	NM_144687,NR_029866	chr19,chr19	-,+	NLRP12,MIR373	2088,-33138
chr8:104431958-104433670	chr8	+	104432591	104433685	True	NM_015420,NM_030780	chr8,chr8	+,-	DCAF13,SLC25A32	-5700,-5123
chr6:56708744-56708992	chr6	+	56708753	56708959	True	NM_152731,NM_001723	chr6,chr6	+,-	BEND6,DST	110813,-201059
chr4:152120904-152122882	chr4	+	152121225	152122631	True	NM_183375,NM_001009555,NM_001128924	chr4,chr4,chr4	+,-,-	PRSS48,SH3D19,SH3D19	75693,25083,-24521
chr17:62049229-62049981	chr17	+	62049300	62049964	True	NM_001164257,NM_000334	chr17,chr17	+,-	C17orf72,SCN4A	25746,364
chr10:98742249-98743795	chr10	+	98742562	98743719	True	NM_003061,NM_015652	chr10,chr10	-,+	SLIT1,C10orf12	202015,-1579
chr1:40723695-40723905	chr1	+	40723871	40723947	True	NM_005857,NM_001852	chr1,chr1	+,-	ZMPSTE24,COL9A2	-189,59042
chr11:107877509-107878650	chr11	+	107877643	107878412	True	NM_017515,NM_003478	chr11,chr11	-,+	SLC35F2,CUL5	-147729,995
chr1:19922963-19923213	chr1	+	19923033	19923189	True	NM_001204083,NM_001204082,NM_001032363,NM_001204089,NM_001204088,NR_033757,NR_033758,NM_004930	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,+,+,-	C1orf151,C1orf151,C1orf151,C1orf15-NBL1,C1orf15-NBL1,C1orf151,C1orf151,CAPZB	281,281,281,281,281,281,281,-110967
chr19:52196485-52197919	chr19	+	52196635	52197775	True	NM_001523,NR_029843,NR_029693,NR_024330,NR_029482	chr19,chr19,chr19,chr19,chr19	-,+,+,+,+	HAS1,MIR99B,MIR125A,NCRNA00085,MIRLET7E	29496,-821,-179,-93,-647
chr4:75231114-75231579	chr4	+	75231137	75231595	True	NM_001432,NM_002089	chr4,chr4	+,-	EREG,CXCL2	-328,-266140
chr11:76813045-76813294	chr11	+	76813168	76813264	True	NM_182833,NM_006189	chr11,chr11	-,+	GDPD4,OMP	185249,621
chr3:32293407-32294995	chr3	+	32293712	32294757	True	NM_178868,NM_017801	chr3,chr3	+,-	CMTM8,CMTM6	-13600,249709
chr1:86932520-86934363	chr1	+	86932531	86934355	True	NM_001285,NM_020729	chr1,chr1	+,-	CLCA1,ODF2L	170,-70506
chr19:50142204-50142406	chr19	+	50142264	50142366	True	NM_006270,NM_021228	chr19,chr19	-,+	RRAS,SCAF1	1084,3015
chr7:102119911-102120567	chr7	+	102119910	102120567	True	NM_006234,NM_152892	chr7,chr7	-,+	POLR2J,LRWD1	-529,-14571
chr7:102119911-102120567	chr7	+	44059293	44059353	False	NM_175064,NR_003655	chr7,chr7	+,-	SPDYE1,POLR2J4	-18855,-545
chr7:102119911-102120567	chr7	+	102213567	102213627	False	NM_001166339,NM_001097615	chr7,chr7	+,-	SPDYE2L,POLR2J3	-21939,-499
chr7:102119911-102120567	chr7	+	102312640	102312700	False	NM_032959,NM_001166339	chr7,chr7	-,+	POLR2J2,SPDYE2L	-458,-21919
chr2:173687337-173688972	chr2	+	173687380	173689019	True	NR_026995,NM_001100397	chr2,chr2	-,+	LOC91149,RAPGEF4	-86446,-1116
chr16:5147523-5147764	chr16	+	5147544	5147712	True	NM_019109,NM_201400,NM_201598	chr16,chr16,chr16	+,-,-	ALG1,FAM86A,FAM86A	-25785,127,127
chr17:45606295-45606861	chr17	+	45606401	45606513	True	NR_033934,NM_006310	chr17,chr17	-,+	MRPL45P2,NPEPPS	-36415,1930
chr1:103572376-103573944	chr1	+	103572431	103573928	True	NM_080629,NM_001854,NM_080630,NM_017619,NM_001190709	chr1,chr1,chr1,chr1,chr1	-,-,-,+,-	COL11A1,COL11A1,COL11A1,RNPC3,COL11A1	174,174,174,494649,174
chr14:74037531-74038167	chr14	+	74037696	74038164	True	NM_203309,NM_006821	chr14,chr14	-,+	HEATR4,ACOT2	-12045,-1976
chr14:74037531-74038167	chr14	+	74006079	74006129	False	NM_203309,NM_001037161	chr14,chr14	-,+	HEATR4,ACOT1	19572,-2202
chrY:15015599-15016004	chrY	+	15015639	15016021	True	NM_004660,NM_001122665,NR_033667	chrY,chrY,chrY	+,+,-	DDX3Y,DDX3Y,GYG2P1	677,1,-482250
chr8:130952291-130952571	chr8	+	130952307	130952595	True	NM_016623,NR_031613	chr8,chr8	-,+	FAM49B,MIR1208	-307,-1789996
chr7:6689066-6690109	chr7	+	6689085	6690097	True	NM_017560,NM_006956	chr7,chr7	+,-	ZNF853,ZNF12	-33609,56525
chr1:28997278-28997482	chr1	+	28997285	28997523	True	NM_024482,NM_005644,NM_006582	chr1,chr1,chr1	+,-,+	GMEB1,TAF12,GMEB1	-2104,-27681,-2104
chr17:7788920-7789276	chr17	+	7789133	7789193	True	NM_032356,NM_005852,NM_001005273,NM_001005271	chr17,chr17,chr17,chr17	-,+,+,+	LSMD1,CHD3,CHD3,CHD3	-27961,2975,2975,-1061
chr1:10856898-10857419	chr1	+	10857081	10857303	True	NM_001079843,NM_007375,NM_017766	chr1,chr1,chr1	-,+,-	CASZ1,TARDBP,CASZ1	-374,215375,-374
chr14:102029093-102029596	chr14	+	102029335	102029479	True	NR_002770,NR_031649,NM_001362	chr14,chr14,chr14	-,-,+	DIO3OS,MIR1247,DIO3	-7322,-2576,-1698
chr4:5892703-5892971	chr4	+	5892755	5892995	True	NM_001313,NM_153717,NM_001014809	chr4,chr4,chr4	-,+,-	CRMP1,EVC,CRMP1	-2440,-179882,1840
chr9:89771498-89773224	chr9	+	89771560	89773133	True	NR_036691,NM_001001709	chr9,chr9	-,+	LOC494127,C9orf170	-71420,-8053
chr1:84802277-84804211	chr1	+	84802790	84803415	True	NM_001134664,NR_003927	chr1,chr1	+,-	SAMD13,UOX	-34507,60212
chr5:149737294-149737502	chr5	+	149737351	149737469	True	NM_001135244,NM_001135243,NM_001195141,NM_001135245,NM_000356,NM_001012301,NM_001008657	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,-,+	TCOF1,TCOF1,TCOF1,TCOF1,TCOF1,ARSI,TCOF1	-200,-200,-200,-200,-200,-54826,-200
chr1:180124115-180124347	chr1	+	180124131	180124271	True	NM_001004128,NR_037642,NM_002826	chr1,chr1,chr1	+,-,+	QSOX1,LOC100527964,QSOX1	-214,119595,-214
chr11:66447049-66447358	chr11	+	66447140	66447415	True	NM_001198844,NM_031492	chr11,chr11	+,-	RBM4,RBM4B	-41103,-1865
chr1:111740452-111742148	chr1	+	111740594	111742084	True	NM_024901,NM_001025197	chr1,chr1	-,+	DENND2D,CHI3L2	1247,28196
chr2:11294814-11295054	chr2	+	11294956	11295064	True	NM_152391,NM_004850	chr2,chr2	+,-	PQLC3,ROCK2	475,189697
chr20:30325451-30326011	chr20	+	30325575	30325858	True	NM_012112,NM_138578	chr20,chr20	+,-	TPX2,BCL2L1	1045,-14919
chr7:154861582-154861823	chr7	+	154861617	154861790	True	NM_007349,NM_024012	chr7,chr7	-,+	PAXIP1,HTR5A	-66935,755
chr16:66961994-66962457	chr16	+	66961996	66962494	True	NM_003869,NM_001204746,NM_016062,NM_001204744,NM_001204745,NM_198061,NM_001128850,NM_004062,NM_004165,NR_024525,NR_036684	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,-,-,+,-,-,-,-,+	CES2,CDH16,FAM96B,CDH16,CDH16,CES2,RRAD,CDH16,RRAD,FAM96B,CES2	5852,-9109,5876,-9109,-9109,5852,-2557,-9109,-2557,5876,5879
chr11:55319666-55320876	chr11	+	55319785	55320774	True	NM_001004700,NM_001001920	chr11,chr11	-,+	OR4C11,OR4C15	51140,1008
chr15:85193750-85195189	chr15	+	85194796	85195086	True	NR_004859,NM_032856,NM_021077,NM_205858	chr15,chr15,chr15,chr15	+,-,-,-	SCAND2,WDR73,NMB,NMB	-20156,2485,6766,6766
chr2:136503654-136504840	chr2	+	136503833	136504709	True	NM_002299,NM_014607	chr2,chr2	-,+	LCT,UBXN4	90093,-4708
chr12:6898856-6899729	chr12	+	6898946	6899665	True	NM_001195015,NM_001195014,NM_001195017,NM_001195016,NR_026581,NR_036545,NM_000616	chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,+,+,-,+,+	CD4,CD4,CD4,CD4,MLF2,CD4,CD4	-305,-305,-305,-305,-36310,-305,-359
chr7:131367989-131368531	chr7	+	131368087	131368462	True	NM_005397,NM_013255	chr7,chr7	-,+	PODXL,MKLN1	-126711,-355550
chr22:30938904-30939436	chr22	+	30938920	30939462	True	NM_001193336,NM_000355	chr22,chr22	-,+	LOC730005,TCN2	3257,63607
chr3:127348434-127348638	chr3	+	127348595	127348685	True	NM_015720,NM_001142646	chr3,chr3	+,-	PODXL2,TPRA1	-607,-39027
chr3:195633763-195634116	chr3	+	195633875	195634159	True	NM_001098516,NM_005781	chr3,chr3	+,-	MUC20,TNK2	-182835,1771
chr12:104349017-104350413	chr12	+	104349447	104350431	True	NM_003211,NM_001135570	chr12,chr12	+,-	TDG,C12orf73	9161,612
chr1:155226436-155227287	chr1	+	155226442	155227306	True	NM_020897,NM_198264,NM_052837,NM_006589,NM_005698	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	HCN3,FAM189B,SCAMP3,FAM189B,SCAMP3	20067,-1168,4939,-1168,4939
chr2:45781489-45782696	chr2	+	45781657	45782624	True	NM_018079,NM_005400	chr2,chr2	-,+	SRBD1,PRKCE	55859,96418
chr3:108272833-108274359	chr3	+	108273417	108274397	True	NM_014648,NM_014981	chr3,chr3	+,-	DZIP3,MYH15	33939,-25248
chr14:74226667-74226947	chr14	+	74226779	74226931	True	NM_194278,NM_001146154	chr14,chr14	-,+	C14orf43,PTGR2	120,91602
chr11:72432938-72433315	chr11	+	72432949	72433201	True	NM_015242,NM_001135190,NM_033388	chr11,chr11,chr11	-,-,+	ARAP1,ARAP1,ATG16L2	252,252,92249
chr19:19030797-19031670	chr19	+	19030822	19031642	True	NR_033677,NM_199444,NM_199442,NM_019070,NM_007263	chr19,chr19,chr19,chr19,chr19	+,-,-,+,-	DDX49,COPE,COPE,DDX49,COPE	-391,-623,-623,-391,-623
chr7:77320863-77322347	chr7	+	77321141	77322401	True	NM_032936,NM_198467	chr7,chr7	-,+	TMEM60,RSBN1L	105401,3341
chr5:90575840-90576373	chr5	+	90575884	90576340	True	NM_020801,NR_027435	chr5,chr5	-,+	ARRDC3,LOC100129716	102859,99823
chr2:127410960-127412489	chr2	+	127411015	127412489	True	NM_002101,NM_016815,NM_139348	chr2,chr2,chr2	+,+,-	GYPC,GYPC,BIN1	1194,1194,452426
chr19:53608353-53609787	chr19	+	53608883	53608958	True	NM_001191055,NM_033288,NM_001102603,NM_198893	chr19,chr19,chr19,chr19	+,-,-,-	HERV-V2,ZNF160,ZNF160,ZNF160	-60948,-2196,-2196,-2196
chr3:52865590-52866189	chr3	+	52865599	52866071	True	NM_002218,NM_001166449,NM_205853,NM_002217	chr3,chr3,chr3,chr3	-,-,-,+	ITIH4,ITIH4,MUSTN1,ITIH3	-882,-882,3214,-36866
chr4:113604435-113604885	chr4	+	113604628	113604682	True	NM_015454,NR_029857	chr4,chr4	+,-	LARP7,MIR302B	-46068,-34915
chr5:159738229-159738724	chr5	+	159738273	159738754	True	NM_001445,NM_024565	chr5,chr5	+,-	FABP6,CCNJL	-81893,869
chr19:2787190-2787804	chr19	+	2787199	2787677	True	NM_003249,NM_003021	chr19,chr19	+,-	THOP1,SGTA	-1744,-3845
chr9:131083226-131084629	chr9	+	131083603	131084625	True	NM_016035,NM_015679	chr9,chr9	+,-	COQ4,TRUB2	165,122
chr17:72856830-72857114	chr17	+	72856835	72856909	True	NM_000835,NM_178160	chr17,chr17	-,+	GRIN2C,OTOP2	-828,63460
chr10:90362771-90363039	chr10	+	90362952	90363090	True	NM_001031709,NM_001010939	chr10,chr10	-,+	RNLS,LIPJ	-19870,-16484
chr2:74542080-74542489	chr2	+	74542134	74542249	True	NR_024463,NM_021196	chr2,chr2	+,-	LOC100189589,SLC4A5	70595,-14
chr2:70121412-70122238	chr2	+	70121482	70122249	True	NM_006857,NR_037862,NM_152792	chr2,chr2,chr2	+,+,-	SNRNP27,SNRNP27,ASPRV1	-466,-466,67198
chr2:223917624-223917941	chr2	+	223917642	223917732	True	NM_080671,NM_005687	chr2,chr2	+,-	KCNE4,FARSB	-833,-396815
chr3:123707923-123708207	chr3	+	123707924	123708232	True	NR_028136,NM_017578	chr3,chr3	+,-	KALRN,ROPN1	105325,2019
chr5:103426026-103426938	chr5	+	103426406	103426976	True	NM_033211,NM_031438	chr5,chr5	+,-	C5orf30,NUDT12	-832026,-527916
chr16:74339501-74339759	chr16	+	74339675	74339807	True	NR_026950,NM_002811	chr16,chr16	-,+	LOC283922,PSMD7	62396,-9063
chr16:4291178-4291858	chr16	+	4291237	4291537	True	NM_001098814,NM_032575	chr16,chr16	-,+	SRL,GLIS2	594,90687
chr1:204183284-204184116	chr1	+	204183319	204183819	True	NM_005686,NM_198447	chr1,chr1	+,-	SOX13,GOLT1A	-141124,-99
chr6:170573367-170573897	chr6	+	170573430	170573946	True	NM_032448,NR_002787	chr6,chr6	+,-	FAM120B,LOC154449	41897,-1773
chr12:53298966-53299787	chr12	+	53299062	53299586	True	NM_199187,NM_002273	chr12,chr12	+,-	KRT18,KRT8	43068,-194
chr9:131100379-131101261	chr9	+	131100483	131101092	True	NM_015679,NM_005094	chr9,chr9	-,+	TRUB2,SLC27A4	-15786,1746
chr12:109529433-109530769	chr12	+	109529679	109530806	True	NM_001205179,NM_080911,NM_001205180,NM_001145375,NM_001145374,NM_003362,NM_001001655,NR_026930,NR_026931	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,+,-,-,-,+,-,-,-	ALKBH2,UNG,ALKBH2,ALKBH2,ALKBH2,UNG,ALKBH2,ALKBH2,ALKBH2	537,4592,537,537,537,5116,537,537,537
chr2:225258879-225259213	chr2	+	225258921	225259237	True	NM_022915,NM_001122779,NM_024785	chr2,chr2,chr2	+,-,-	MRPL44,FAM124B,FAM124B	-436851,7530,7530
chr11:118873998-118874301	chr11	+	118873998	118874114	True	NM_198489,NR_003040	chr11,chr11	+,-	CCDC84,RPL23AP64	-5197,239
chr17:48586426-48587606	chr17	+	48586675	48587615	True	NM_032133,NM_001267	chr17,chr17	+,-	MYCBPAP,CHAD	-981,-40448
chr3:147126754-147127202	chr3	+	147126766	147127219	True	NM_001168378,NM_001168379,NM_003412,NM_032153	chr3,chr3,chr3,chr3	-,-,+,-	ZIC4,ZIC4,ZIC1,ZIC4	-4695,-3459,-4,-2359
chr11:34129801-34131688	chr11	+	34129803	34131649	True	NM_001144030,NM_024662,NM_005574	chr11,chr11,chr11	+,+,-	NAT10,NAT10,LMO2	-2743,-2743,-215967
chr8:37350254-37350751	chr8	+	37350254	37350658	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	202642,254956
chr11:8922233-8923070	chr11	+	8922669	8923119	True	NM_020642,NM_005418,NM_182901	chr11,chr11,chr11	+,-,+	C11orf17,ST5,C11orf17	9581,9434,9682
chr17:3496247-3497276	chr17	+	3496331	3497085	True	NM_080705,NM_080706,NM_018727,NM_001031681	chr17,chr17,chr17,chr17	-,-,-,+	TRPV1,TRPV1,TRPV1,CTNS	2090,-160,3301,42676
chr19:46800470-46801215	chr19	+	46800689	46801005	True	NM_152796,NM_152795,NM_022462,NM_152794,NM_032040	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	HIF3A,HIF3A,HIF3A,HIF3A,CCDC8	627,-437,627,5850,115964
chr19:42930045-42931995	chr19	+	42930300	42931692	True	NM_001410,NM_005357	chr19,chr19	+,-	MEGF8,LIPE	-100598,-64
chr1:116384913-116385127	chr1	+	116384913	116385167	True	NM_018420,NM_001111061,NM_005599	chr1,chr1,chr1	+,-,-	SLC22A15,NHLH2,NHLH2	133951,-1580,-1166
chr18:61087400-61087992	chr18	+	61087696	61088006	True	NM_004869,NM_002639	chr18,chr18	-,+	VPS4B,SERPINB5	1802,56137
chr11:111475382-111475845	chr11	+	111475381	111475680	True	NM_015191,NM_017589	chr11,chr11	+,-	SIK2,BTG4	-2272,-92317
chr9:131874284-131874500	chr9	+	131874413	131874547	True	NM_178003,NM_178001,NM_178000,NM_021131,NR_028048,NM_001193397,NM_000755	chr9,chr9,chr9,chr9,chr9,chr9,chr9	+,+,+,+,-,+,-	PPP2R4,PPP2R4,PPP2R4,PPP2R4,CRAT,PPP2R4,CRAT	-875,-875,-875,-1240,-1343,-501,-1343
chrX:70318676-70320594	chrX	+	70318839	70320616	True	NM_005938,NM_001170931,NR_033212,NM_001025265	chrX,chrX,chrX,chrX	+,+,-,-	FOXO4,FOXO4,CXorf65,CXorf65	-2891,-2891,6072,6072
chr4:53523914-53524260	chr4	+	53523962	53524250	True	NM_022832,NR_024031,NM_001134223	chr4,chr4,chr4	-,+,-	USP46,KIAA0114,USP46	1302,54370,-1203
chr19:52491737-52492456	chr19	+	52491799	52492363	True	NM_024840,NM_021632	chr19,chr19	+,-	ZNF613,ZNF350	-61162,-1720
chr17:5487284-5487750	chr17	+	5487343	5487434	True	NM_014922,NM_024039,NM_033004,NM_033007,NM_033006,NM_001033053	chr17,chr17,chr17,chr17,chr17,chr17	-,+,-,-,-,-	NLRP1,MIS12,NLRP1,NLRP1,NLRP1,NLRP1	449,-97147,449,449,449,449
chr17:1732840-1733074	chr17	+	1732929	1733061	True	NM_052928,NM_002945	chr17,chr17	-,+	SMYD4,RPA1	164,211
chr17:56312898-56314345	chr17	+	56313459	56314397	True	NM_006151,NR_027647,NM_001160102,NM_001165927	chr17,chr17,chr17,chr17	+,+,+,-	LPO,LPO,LPO,MKS1	1389,1389,1389,-16493
chr10:91396184-91396709	chr10	+	91396502	91396604	True	NM_148977,NM_148978,NM_138316,NM_016195	chr10,chr10,chr10,chr10	-,-,-,+	PANK1,PANK1,PANK1,KIF20B	8661,7093,7093,64762
chr11:122720980-122722237	chr11	+	122721031	122722209	True	NM_019604,NM_001098169	chr11,chr11	+,-	CRTAM,BSX	-11827,130220
chr3:134363868-134364743	chr3	+	134363971	134364679	True	NM_178554,NM_004441	chr3,chr3	-,+	KY,EPHB1	5247,149419
chr17:47492058-47492546	chr17	+	47492083	47492535	True	NM_002634,NM_002507	chr17,chr17	-,+	PHB,NGFR	-27,80119
chr15:57592038-57592323	chr15	+	57592183	57592371	True	NR_015419,NR_024433	chr15,chr15	-,+	LOC145783,LOC283663	-381486,191
chr10:31986985-31988700	chr10	+	31987242	31988552	True	NM_001174094,NM_018287	chr10,chr10	+,-	ZEB1,ARHGAP12	-377229,229268
chr16:3347757-3349716	chr16	+	3348135	3349632	True	NM_153028,NM_033208	chr16,chr16	+,-	ZNF75A,TIGD7	5800,5857
chr20:44515430-44516179	chr20	+	44515550	44516042	True	NM_080749,NM_080608,NM_001167594,NM_080603,NM_000308,NM_001127695	chr20,chr20,chr20,chr20,chr20,chr20	-,-,+,+,+,+	NEURL2,C20orf165,CTSA,ZSWIM1,CTSA,CTSA	3911,248,3548,-5753,3548,3548
chr11:55883470-55885149	chr11	+	55883523	55884854	True	NM_001004064,NM_001005201	chr11,chr11	-,+	OR8J3,OR8H3	20397,4994
chr6:80732159-80733164	chr6	+	80732159	80732823	True	NM_022726,NM_003318	chr6,chr6	-,+	ELOVL4,TTK	-74844,-17888
chr3:39154919-39155913	chr3	+	39155121	39155905	True	NM_031899,NM_145755,NM_001105513	chr3,chr3,chr3	-,+,+	GORASP1,TTC21A,TTC21A	-5991,-6020,-6020
chr7:64254269-64254731	chr7	+	64254429	64254753	True	NR_027661,NM_006524,NM_001160183,NR_027660,NR_002789	chr7,chr7,chr7,chr7,chr7	+,+,+,+,-	ZNF138,ZNF138,ZNF138,ZNF138,LOC168474	17,17,17,17,59475
chr3:14860727-14860953	chr3	+	14860734	14861002	True	NM_152536,NM_022497	chr3,chr3	+,-	FGD5,MRPS25	-316,245864
chr5:176836020-176836334	chr5	+	176836034	176836321	True	NM_001029886,NM_000505,NM_001004105	chr5,chr5,chr5	-,-,+	PFN3,F12,GRK6	-8397,306,17365
chr1:101484088-101485273	chr1	+	101484113	101485209	True	NM_001077395,NM_001077394,NM_133496,NM_015958	chr1,chr1,chr1,chr1	-,-,+,-	DPH5,DPH5,SLC30A7,DPH5	6216,6216,-122537,6216
chr3:184429904-184430167	chr3	+	184430107	184430171	True	NM_001009921,NM_022149	chr3,chr3	+,-	VPS8,MAGEF1	99759,-271
chr6:52229646-52230317	chr6	+	52229657	52230358	True	NM_133367,NM_002388	chr6,chr6	+,-	PAQR8,MCM3	-2789,-80075
chr17:38495827-38497492	chr17	+	38495833	38497437	True	NM_001024809,NM_152219	chr17,chr17	+,-	RARA,GJD3	833,23558
chr1:48392031-48392921	chr1	+	48392112	48392802	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	69810,295554
chr1:209928893-209929327	chr1	+	209928982	209929320	True	NM_152485,NM_025228	chr1,chr1	-,+	C1orf74,TRAF3IP3	28620,73
chr19:10365871-10366542	chr19	+	10366007	10366531	True	NM_015956,NM_146387,NM_004230,NM_146388	chr19,chr19,chr19,chr19	+,+,-,+	MRPL4,MRPL4,S1PR2,MRPL4	-3418,-3418,-24059,-3418
chr1:21603892-21605521	chr1	+	21604072	21605520	True	NM_001113347,NM_032264	chr1,chr1	-,+	ECE1,NBPF3	713,161110
chr6:138725880-138726149	chr6	+	138725958	138726064	True	NR_036099,NM_014320	chr6,chr6	-,+	MIR3145,HEBP2	30417,-673
chr17:60703943-60704220	chr17	+	60703944	60704238	True	NM_001100875,NM_006039	chr17,chr17	-,+	MARCH10,MRC2	179823,523
chr4:140225365-140226031	chr4	+	140225411	140226059	True	NM_001184987,NM_001184986,NM_001184990,NM_001184991,NM_001184989,NM_001184988,NM_057175,NM_002494	chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4	-,-,-,-,-,-,+,-	NDUFC1,NDUFC1,NDUFC1,NDUFC1,NDUFC1,NDUFC1,NAA15,NDUFC1	-1706,-3047,-1706,-3047,-1706,-1706,-2793,-3023
chr2:11608815-11609950	chr2	+	11609076	11610000	True	NM_014668,NR_003094,NR_003095,NR_003092,NR_003093,NM_198256	chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-	GREB1,E2F6,E2F6,E2F6,E2F6,E2F6	64241,-2779,-2779,-2779,-2779,-2779
chr17:62345332-62347208	chr17	+	62345798	62346969	True	NM_018469,NM_001085423	chr17,chr17	-,+	TEX2,C17orf60	-5145,114599
chr11:82600322-82600946	chr11	+	82600668	82600946	True	NM_145018,NM_005040	chr11,chr11	+,-	C11orf82,PRCP	11790,10661
chr17:61995897-61996903	chr17	+	61995976	61996940	True	NM_001318,NM_022579,NM_022581,NM_000515,NM_022560,NM_022561,NM_022562,NM_022580,NR_002947,NM_022559	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,-,-,-,+,-	CSHL1,CSHL1,CSHL1,GH1,GH1,GH1,GH1,CSHL1,TCAM1P,GH1	-7358,-7358,-7358,-204,-204,-204,-204,-7358,-61651,-204
chr5:150536951-150537189	chr5	+	150536951	150537187	True	NM_000405,NM_001155	chr5,chr5	+,-	GM2A,ANXA6	95425,306
chrX:12895635-12896138	chrX	+	12895669	12896124	True	NM_016562,NR_030727	chrX,chrX	+,-	TLR7,LOC349408	-10518,65346
chr15:75250822-75251022	chr15	+	75250931	75251055	True	NM_017793,NM_001178111	chr15,chr15	-,+	RPP25,SCAMP5	-1156,36820
chr2:11501289-11502094	chr2	+	11501525	11501710	True	NM_004850,NM_014668	chr2,chr2	-,+	ROCK2,GREB1	-16814,172531
chr17:75313987-75314367	chr17	+	75314315	75314375	True	NM_006640,NR_036200	chr17,chr17	+,-	SEPT9,MIR4316	1221,78811
chr18:77726224-77726864	chr18	+	77726620	77726839	True	NM_001136180,NM_025078	chr18,chr18	+,-	HSBP1L1,PQLC1	-2097,-14967
chr5:42752734-42754132	chr5	+	42752983	42754073	True	NM_001134848,NM_001085486	chr5,chr5	+,-	CCDC152,SEPP1	2846,58008
chr22:43118939-43120273	chr22	+	43119027	43120140	True	NR_029422,NM_017436	chr22,chr22	+,-	RNU12,A4GALT	-107827,-2151
chrX:47423486-47424676	chrX	+	47423581	47424677	True	NM_001654,NM_006950	chrX,chrX	+,-	ARAF,SYN1	-3120,54629
chr10:135209277-135209848	chr10	+	135209450	135209871	True	NM_138384,NM_004092	chr10,chr10	+,-	MTG1,ECHS1	-1880,-22542
chr19:16297747-16297969	chr19	+	16297773	16298011	True	NM_014077,NM_054113	chr19,chr19	+,-	FAM32A,CIB3	-1589,-13487
chr1:187095984-187097956	chr1	+	187096019	187097973	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-446460,-298042
chr5:151306144-151307894	chr5	+	151306143	151307664	True	NM_198395,NM_000171,NM_001146040	chr5,chr5,chr5	+,-,-	G3BP1,GLRA1,GLRA1	-154721,-1746,-1746
chr17:43391814-43393607	chr17_ctg5_hap1	+	6957	8707	False	NM_001159330,NM_001113738	chr17_ctg5_hap1,chr17_ctg5_hap1	-,+	ARHGAP27,ARL17A	89928,187013
chr17:43391814-43393607	chr17	+	43391821	43393571	True	NM_003954,NR_024435	chr17,chr17	-,+	MAP3K14,LOC100133991	893,-52315
chr6:10589779-10590350	chr6	+	10589908	10590322	True	NM_001145020,NM_145655	chr6,chr6	-,+	C6orf52,GCNT2	104567,-3974
chr14:105950737-105951349	chr14	+	105950917	105951363	True	NM_001311,NM_001312,NM_001519,NM_001198983,NM_001134876,NM_001134877,NM_001134875	chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,+,-,+,+,+,+	CRIP1,CRIP2,BRF1,C14orf80,C14orf80,C14orf80,C14orf80	1893,-9837,-183588,4828,6222,5156,6222
chr9:72288034-72288254	chr9	+	72288082	72288194	True	NM_001163,NM_001010940	chr9,chr9	-,+	APBA1,C9orf135	-807,147536
chr16:89624381-89625029	chr16	+	89624406	89624626	True	NM_033251,NR_002450,NM_000977,NM_013275	chr16,chr16,chr16,chr16	+,+,+,-	RPL13,SNORD68,RPL13,ANKRD11	2504,3211,2463,-67437
chr12:95868241-95869469	chr12	+	95868436	95869467	True	NM_006838,NM_001042403	chr12,chr12	+,-	METAP2,USP44	-665,73204
chr16:4421024-4421443	chr16	+	4421233	4421465	True	NM_016069,NM_138440	chr16,chr16	-,+	PAM16,VASN	-19860,383
chr22:37916615-37916926	chr22	+	37916693	37916868	True	NM_014550,NM_152243	chr22,chr22	-,+	CARD10,CDC42EP1	-1483,39602
chr1:41579949-41581763	chr1	+	41579949	41581803	True	NR_037868,NM_001172222	chr1,chr1	+,-	LOC100507178,SCMH1	-99740,43853
chrX:153139641-153140983	chrX	+	153139764	153140562	True	NM_000425,NM_001143963,NM_024003,NR_027419	chrX,chrX,chrX,chrX	-,-,-,+	L1CAM,L1CAM,L1CAM,AVPR2	887,887,887,27422
chr7:90895306-90895557	chr7	+	90895305	90895581	True	NM_006980,NM_003505	chr7,chr7	-,+	MTERF,FZD1	614485,-1573
chr18:14391688-14391943	chr13	-	19241538	19241588	True	NR_027995,NR_026852	chr13,chr13	-,+	LOC284232,LOC348021	204571,340810
chrX:56280239-56280795	chrX	+	56280436	56280634	True	NM_001159296,NR_002308	chrX,chrX	+,-	KLF8,LOC442454	-21617,483441
chr5:174870948-174871188	chr5	+	174870950	174871186	True	NM_022754,NM_000794	chr5,chr5	+,-	SFXN1,DRD1	34327,27
chr1:244513186-244513711	chr1	+	244513200	244513540	True	NM_001012970,NM_001126	chr1,chr1	+,-	C1orf100,ADSS	2396,101948
chr8:143998340-143998586	chr8	+	143998445	143998629	True	NM_000498,NM_002066	chr8,chr8	-,+	CYP11B2,GML	680,-82279
chr4:176736349-176736959	chr4	+	176736450	176736869	True	NM_170710,NM_201591	chr4,chr4	+,-	WDR17,GPM6A	250115,-2268
chr12:51442420-51442994	chr12	+	51442497	51443037	True	NM_001174125,NM_015416,NM_001024668	chr12,chr12,chr12	-,+,+	SLC11A2,LETMD1,LETMD1	-20439,-464,-464
chr9:99050471-99051141	chr9	+	99050477	99050802	True	NM_014282,NM_000197	chr9,chr9	+,-	HABP4,HSD17B3	161611,13691
chr5:13948229-13948887	chr5	+	13948274	13948904	True	NM_007118,NM_001369	chr5,chr5	+,-	TRIO,DNAH5	194924,-3685
chr13:42007123-42007853	chr13	+	42007577	42007781	True	NM_004294,NR_002163	chr13,chr13	-,+	MTRF1,OR7E37P	-169864,8918
chr12:56076033-56077133	chr12	+	56076270	56077001	True	NM_001144996,NM_152637	chr12,chr12	-,+	ITGA7,METTL7B	24735,-991
chr3:183901566-183901780	chr3	+	183901600	183901694	True	NM_005787,NM_001025205,NM_018358,NM_004068	chr3,chr3,chr3,chr3	-,+,+,+	ALG3,AP2M1,ABCF3,AP2M1	65115,-9017,2168,-9017
chr17:73039562-73040160	chr17	+	73039855	73040103	True	NM_015353,NM_006356,NM_001003785	chr17,chr17,chr17	+,-,-	KCTD2,ATP5H,ATP5H	3175,3021,3021
chr14:23564856-23565445	chr14	+	23565029	23565445	True	NM_001164815,NM_001164814,NM_017924,NM_014977	chr14,chr14,chr14,chr14	-,-,+,-	ACIN1,ACIN1,C14orf119,ACIN1	-206,-206,-292,-206
chr19:4457957-4458583	chr19	+	4457956	4458581	True	NM_025241,NM_001171091,NM_001001520	chr19,chr19,chr19	-,-,+	UBXN6,UBXN6,HDGFRP2	-165,-2661,13673
chr2:160572264-160573492	chr2	+	160572269	160573450	True	NM_001198763,NM_022826	chr2,chr2	-,+	CD302,MARCH7	81368,-3316
chr12:56913333-56913637	chr12	+	56913460	56913593	True	NM_013267,NM_002898	chr12,chr12	-,+	GLS2,RBMS2	-31279,2015
chr19:35632071-35632304	chr19	+	35632070	35632138	True	NM_005031,NM_022006,NM_139284,NM_021902	chr19,chr19,chr19,chr19	+,+,-,+	FXYD1,FXYD7,LGI4,FXYD1	-1729,2015,-5892,-2389
chr13:46624587-46626468	chr13	+	46625079	46626358	True	NM_015070,NM_152719	chr13,chr13	-,+	ZC3H13,SPERT	593,-348691
chr15:82726101-82726988	chr15	+	82726186	82726248	True	NR_026811,NM_198181	chr15,chr15	-,+	LOC80154,GOLGA6L9	72125,-4055
chr15:82726101-82726988	chr15	-	82637637	82637697	False	NM_001164465,NR_024474,NR_004847	chr15,chr15,chr15	-,+,+	GOLGA6L10,UBE2Q2P3,UBE2Q2P2	4060,9588,9588
chr15:82726101-82726988	chr15	+	83102711	83102773	False	NR_026811,NM_198181	chr15,chr15	-,+	LOC80154,GOLGA6L9	80178,-4055
chr15:82726101-82726988	chr15	-	82935131	82935191	False	NR_026811,NR_033936,NR_033579	chr15,chr15,chr15	+,+,-	LOC80154,LOC727849,LOC440297	9630,9601,51287
chr15:82726101-82726988	chr15	-	83014134	83014194	False	NM_001164465,NR_024474,NR_004847	chr15,chr15,chr15	-,+,+	GOLGA6L10,UBE2Q2P3,UBE2Q2P2	4055,9578,9578
chr3:68068964-68069465	chr3	+	68068991	68069491	True	NM_213609,NM_003848	chr3,chr3	+,-	FAM19A1,SUCLG2	-15601,-363953
chr19:18139837-18141421	chr19	+	18140592	18141356	True	NM_015683,NM_005535	chr19,chr19	+,-	ARRDC2,IL12RB1	-21666,56391
chr9:95860412-95860645	chr9	+	95860463	95860615	True	NM_032310,NM_004148	chr9,chr9	+,-	C9orf89,NINJ1	-2064,36005
chr15:59279740-59280052	chr15	+	59279758	59280012	True	NM_024755,NM_017610	chr15,chr15	-,+	SLTM,RNF111	-53906,0
chr10:103894339-103895429	chr10	+	103894487	103895480	True	NM_001113407,NM_015062	chr10,chr10	-,+	LDB1,PPRC1	-14277,-1751
chr2:110549502-110549827	chr2	+	110549572	110549850	True	NM_178584,NM_005054,NM_001037866,NM_032260,NM_001123363	chr2,chr2,chr2,chr2,chr2	-,+,+,+,+	SEPT10,RGPD5,RGPD6,RGPD5,RGPD6	-177789,2115,484,484,484
chr2:110549502-110549827	chr2	-	111336793	111337071	False	NM_001142807,NM_005054,NM_001123363,NM_032260,NM_001037866	chr2,chr2,chr2,chr2,chr2	+,-,-,-,-	ACOXL,RGPD5,RGPD6,RGPD5,RGPD6	153078,-2115,-484,-484,-484
chr7:43623514-43624515	chr7	+	43623569	43624414	True	NM_018224,NM_004760	chr7,chr7	-,+	C7orf44,STK17A	144719,-930
chr5:137089952-137090506	chr5	+	137089953	137090363	True	NM_006805,NR_002713	chr5,chr5	-,+	HNRNPA0,NPY6R	12,46518
chr14:57278328-57278750	chr14	+	57278604	57278744	True	NM_021728,NM_172337,NR_029385	chr14,chr14,chr14	-,-,+	OTX2,OTX2,OTX2OS1	-1420,-6259,1156
chr12:50237338-50239327	chr12	+	50237469	50238991	True	NM_181708,NR_027501	chr12,chr12	-,+	BCDIN3D,LOC100286844	-557,-15194
chr7:140306114-140307515	chr7	+	140306344	140307366	True	NM_015689,NM_052853	chr7,chr7	-,+	DENND2A,ADCK2	-4002,65586
chr12:25105306-25106654	chr12	+	25105602	25106146	True	NM_005504,NM_001204126,NM_001178091,NM_001178092	chr12,chr12,chr12,chr12	-,+,-,-	BCAT1,LRMP,BCAT1,BCAT1	-3209,99034,-3209,-3209
chr4:87813697-87814457	chr4	+	87813788	87814384	True	NM_144645,NM_001166693	chr4,chr4	-,+	C4orf36,AFF1	-213,41769
chr17:79622384-79622691	chr17	+	79622474	79622730	True	NM_002602,NM_199287,NR_026872	chr17,chr17,chr17	-,+,-	PDE6G,CCDC137,PDE6G	927,11030,927
chr17:4339480-4341325	chr17	+	4339541	4340635	True	NM_003342,NM_182538	chr17,chr17	-,+	UBE2G1,SPNS3	-69572,-2373
chr7:129707013-129707763	chr7	+	129707332	129707680	True	NM_016478,NM_014997	chr7,chr7	-,+	ZC3HC1,KLHDC10	-16099,2668
chr1:160537200-160538501	chr1	+	160537414	160538398	True	NM_001184879,NM_020335	chr1,chr1	-,+	CD84,VANGL2	10963,-167113
chr10:13631271-13632325	chr10	+	13631294	13632312	True	NM_003675,NM_001100912	chr10,chr10	+,-	PRPF18,BEND7	-2413,-86318
chr5:179920147-179920622	chr5	+	179920211	179920671	True	NM_052863,NM_015455	chr5,chr5	-,+	SCGB3A1,CNOT6	97866,745
chr10:104535364-104536033	chr10	+	104535372	104536050	True	NM_000102,NM_004311,NM_017787	chr10,chr10,chr10	-,-,+	CYP17A1,ARL3,C10orf26	61290,-61182,41
chr17:18585891-18587853	chr17	+	18586139	18587494	True	NM_001145045,NM_001037330,NR_026718	chr17,chr17,chr17	-,+,-	ZNF286B,TRIM16L,FOXO3B	-567,37907,-9645
chr17:18585891-18587853	chr17	-	15602124	15602174	False	NM_006470,NM_001130842,NM_020652	chr17,chr17,chr17	-,+,+	TRIM16,ZNF286A,ZNF286A	-15931,716,716
chr1:26147743-26148136	chr1	+	26147756	26148112	True	NM_019557,NR_024498,NM_001099625,NM_001099627,NM_001099626	chr1,chr1,chr1,chr1,chr1	+,-,+,+,+	FAM54B,LOC646471,FAM54B,FAM54B,FAM54B	-1123,2035,-1410,-1410,-488
chr16:4605665-4606071	chr16	+	4606001	4606093	True	NM_001145011,NM_013399	chr16,chr16	+,-	LOC342346,C16orf5	397,-17185
chr5:141001635-141001892	chr5	+	141001643	141001865	True	NM_005219,NM_001130029,NM_001079812	chr5,chr5,chr5	-,+,-	DIAPH1,RELL2,DIAPH1	-3021,14651,-3021
chr19:12777143-12777366	chr19	+	12777149	12777279	True	NM_001099737,NM_001173498,NM_032332,NM_000528,NM_016145,NR_029375	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,-,-,+	WDR83,MAN2B1,WDR83,MAN2B1,C19orf56,WDR83	338,362,3237,362,3236,338
chr1:36919192-36921119	chr1	+	36919595	36920907	True	NM_145047,NM_024676,NM_206837,NM_031280	chr1,chr1,chr1,chr1	-,+,-,-	OSCP1,SH3D21,OSCP1,MRPS15	-3509,-146938,-3509,9183
chr9:132584755-132584983	chr9	+	132584906	132584995	True	NM_001110303,NM_000113	chr9,chr9	+,-	USP20,TOR1A	12700,1497
chr12:1701863-1702153	chr12	+	1701918	1702190	True	NM_030775,NM_152441	chr12,chr12	+,-	WNT5B,FBXL14	24031,1191
chr16:12007432-12008199	chr16	+	12007528	12008231	True	NM_001192,NM_002094,NM_001130007,NM_001130006	chr16,chr16,chr16,chr16	+,-,-,-	TNFRSF17,GSPT1,GSPT1,GSPT1	50732,1644,2338,1644
chr6:167522721-167523483	chr6	+	167522903	167523500	True	NM_005299,NM_004367	chr6,chr6	-,+	GPR31,CCR6	47870,1794
chr13:49691382-49692453	chr13	+	49691392	49692337	True	NM_014923,NM_030925	chr13,chr13	+,-	FNDC3A,CAB39L	-7001,283455
chr8:17781350-17781664	chr8	+	17781518	17781672	True	NM_006197,NM_201552	chr8,chr8	+,-	PCM1,FGL1	-1203,-28471
chr3:151987050-151987280	chr3	+	151987108	151987236	True	NR_027038,NM_021038,NM_207292,NR_027037	chr3,chr3,chr3,chr3	-,+,+,-	LOC401093,MBNL1,MBNL1,LOC401093	229,-1330,-1330,229
chr19:55955729-55956042	chr19	+	55955785	55956083	True	NM_033113,NM_001145176	chr19,chr19	+,-	ZNF628,SHISA7	31615,-1555
chr22:42467275-42467614	chr22	+	42467291	42467623	True	NM_000262,NM_001002034,NM_033318	chr22,chr22,chr22	-,+,+	NAGA,FAM109B,C22orf32	-445,2631,8075
chr6:52928811-52929090	chr6	+	52928875	52928940	True	NM_012347,NM_014920,NM_033481,NM_033480,NM_016513	chr6,chr6,chr6,chr6,chr6	+,-,+,+,-	FBXO9,ICK,FBXO9,FBXO9,ICK	6830,-2275,855,1316,-2275
chr11:10476660-10477023	chr11	+	10476698	10476911	True	NM_001025390,NM_001025389,NM_000480,NM_001172430,NM_001172431,NM_001190702	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,-	AMPD3,AMPD3,AMPD3,AMPD3,AMPD3,MTRNR2L8	569,-85,-4527,5766,-4883,53863
chr22:38140715-38140963	chr22	+	38140721	38140789	True	NM_138797,NM_138632,NM_007032	chr22,chr22,chr22	-,+,+	ANKRD54,TRIOBP,TRIOBP	99614,1451,1451
chr6:4344784-4345955	chr6	+	4344873	4345916	True	NR_028588,NM_001085401	chr6,chr6	-,+	ECI2,C6orf201	-209042,-265485
chr7:71873352-71873752	chr7	+	71873458	71873558	True	NR_001588,NM_031468	chr7,chr7	+,-	SBDSP1,CALN1	426393,3860
chr11:61224275-61225608	chr11	+	61224323	61224739	True	NM_001136040,NM_001170753	chr11,chr11	-,+	CPSF7,C11orf66	-26859,23845
chr8:43003238-43003787	chr8	+	43003508	43003576	True	NR_027669,NM_152419	chr8,chr8	-,+	RNF170,HGSNAT	-251642,-7971
chr7:102281526-102281755	chr7	+	102281566	102281684	True	NM_001114403,NM_001166339,NM_001031618	chr7,chr7,chr7	-,+,+	UPK3BL,SPDYE2L,SPDYE2	1604,9087,9087
chr7:102281526-102281755	chr7	+	102182455	102182573	False	NM_001031618,NM_001166339,NM_001097615	chr7,chr7,chr7	+,+,-	SPDYE2,SPDYE2L,POLR2J3	9105,9105,30545
chr11:6261277-6261596	chr11	+	6261318	6261632	True	NM_001037329,NM_032127,NM_001098794	chr11,chr11,chr11	+,-,-	CNGA4,FAM160A2,FAM160A2	-1039,-5377,-5377
chr4:10024575-10025255	chr4	+	10024588	10025276	True	NM_000798,NM_020041	chr4,chr4	+,-	DRD5,SLC2A9	-241381,-1474
chr11:118900335-118900661	chr11	+	118900393	118900649	True	NR_037429,NM_001164280,NM_001164279,NM_001164278,NM_001467,NM_001164277	chr11,chr11,chr11,chr11,chr11,chr11	+,-,-,-,-,-	MIR3656,SLC37A4,SLC37A4,SLC37A4,SLC37A4,SLC37A4	-10797,-115,1017,1017,1017,1017
chr1:22969957-22970214	chr1	+	22969979	22970209	True	NR_036214,NM_172369,NM_015991,NM_001114101,NM_000491	chr1,chr1,chr1,chr1,chr1	-,+,+,+,+	MIR4253,C1QC,C1QA,C1QC,C1QB	219560,-28,-6912,-28,9472
chr19:3698319-3698924	chr19	+	3698403	3698862	True	NM_014428,NM_012398,NM_001195733	chr19,chr19,chr19	+,-,-	TJP3,PIP5K1C,PIP5K1C	29511,1666,1666
chr7:119509365-119509767	chr7	+	119509531	119509638	True	NM_012281,NM_012338	chr7,chr7	+,-	KCND2,TSPAN12	404083,988596
chr2:239146217-239147431	chr2	+	239146439	239147024	True	NR_026925,NM_001142853,NR_026926,NM_018645,NR_026923	chr2,chr2,chr2,chr2,chr2	-,-,-,-,+	LOC151174,HES6,LOC151174,HES6,LOC643387	-6121,1707,-6121,1707,-6170
chr9:116634826-116635779	chr9	+	116634881	116635777	True	NM_133374,NM_001633	chr9,chr9	+,-	ZNF618,AMBP	2784,205025
chr5:607966-608753	chr5	+	608043	608777	True	NM_004174,NM_018140	chr5,chr5	-,+	SLC9A3,CEP72	-83494,3627
chr2:220070502-220070892	chr2	+	220070810	220070940	True	NM_138802,NM_005689	chr2,chr2	+,-	ZFAND2B,ABCB6	597,12822
chr2:44222302-44222717	chr2	+	44222387	44222579	True	NM_022437,NM_133259	chr2,chr2	+,-	ABCG8,LRPPRC	-156336,615
chr7:129285848-129286135	chr7	+	129285971	129286172	True	NM_001040110,NR_029614	chr7,chr7	+,-	NRF1,MIR182	-16115,124211
chr1:219631957-219632262	chr1	+	219631957	219632238	True	NM_138794,NM_018713	chr1,chr1	+,-	LYPLAL1,SLC30A10	-284816,469814
chr11:107878806-107879175	chr11	+	107878828	107879223	True	NM_017515,NM_003478	chr11,chr11	-,+	SLC35F2,CUL5	-148914,184
chr17:45920024-45920579	chr17	+	45920346	45920532	True	NM_001145023,NM_138355,NM_033413	chr17,chr17,chr17	-,-,+	SCRN2,SCRN2,LRRC46	-1647,-1647,-11404
chr17:38212949-38213362	chr17	+	38212969	38213329	True	NM_014815,NM_001079518,NM_199334,NM_001190919,NM_001190918,NM_003250	chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,+,+,+	MED24,MED24,THRA,THRA,THRA,THRA	-2080,-2080,5738,5116,5738,5738
chr2:47597239-47597501	chr2	+	47597267	47597343	True	NR_030286,NM_001743,NM_002354	chr2,chr2,chr2	+,-,+	MIR559,CALM2,EPCAM	7470,-193527,-1040
chr16:49861685-49862704	chr16	+	49861929	49862693	True	NM_153261,NM_015069	chr16,chr16	+,-	TMEM188,ZNF423	196495,-1011
chr2:191028014-191029067	chr2	+	191028199	191028998	True	NM_005259,NM_001042520	chr2,chr2	-,+	MSTN,C2orf88	-100744,-13287
chr10:135041096-135042278	chr10	+	135041150	135042264	True	NR_030170,NM_014468,NM_003577	chr10,chr10,chr10	-,+,+	MIR202,VENTX,UTF1	18910,9143,1513
chr10:120859037-120859645	chr10	+	120859056	120859205	True	NM_207009,NR_027141,NM_003750	chr10,chr10,chr10	+,+,-	FAM45A,FAM45B,EIF3A	4405,4423,-18722
chr21:30439076-30440939	chr21	+	30439197	30440717	True	NM_006585,NM_020152	chr21,chr21	-,+	CCT8,C21orf7	5350,12155
chr12:54021753-54022316	chr12	+	54021945	54022019	True	NM_006856,NM_001130060,NM_134324	chr12,chr12,chr12	-,-,+	ATF7,ATF7,TARBP2	-1746,-1746,-126626
chr12:6949680-6949908	chr12	+	6949895	6949955	True	NM_002075,NM_031299	chr12,chr12	+,-	GNB3,CDCA3	-571,10551
chr1:109844082-109844916	chr1	+	109844425	109844959	True	NM_001408,NM_001010985	chr1,chr1	+,-	CELSR2,MYBPHL	-51838,4754
chr13:81908607-81910152	chr13	+	81908658	81910124	True	NM_019080,NM_005842	chr13,chr13	+,-	NDFIP2,SPRY2	-1853461,-993572
chr4:154708912-154709605	chr4	+	154708993	154709367	True	NM_003264,NM_003013	chr4,chr4	+,-	TLR2,SFRP2	-103603,912
chr14:20663554-20663832	chr14	+	20663751	20663872	True	NM_001005503,NM_138376	chr14,chr14	+,-	OR11G2,TTC5	1622,110338
chr14:100842869-100843079	chr14	+	100842896	100843074	True	NM_001161476,NM_173701,NM_024515,NM_004184,NM_213646,NM_213645	chr14,chr14,chr14,chr14,chr14,chr14	+,-,+,-,-,-	WDR25,WARS,WDR25,WARS,WARS,WARS	-192,-216,-114,-969,-969,-216
chr18:75686793-75687088	chr18	+	75686812	75687114	True	NM_001480,NM_001025100	chr18,chr18	+,-	GALR1,MBP	-724856,-842038
chr12:105482377-105484179	chr12	+	105483217	105484036	True	NR_027752,NM_001034173,NM_015275	chr12,chr12,chr12	-,-,+	ALDH1L2,ALDH1L2,KIAA1033	-4876,-4876,17455
chr18:14970206-14971704	chr18	+	14970222	14971400	True	NR_027417,NR_036153	chr18,chr18	-,+	LOC644669,MIR3156-2	354568,-140108
chr17:7484959-7485468	chr17	+	7485382	7485456	True	NM_001416,NR_002918,NM_004870,NM_001040059,NR_002912,NR_024603,NR_002604,NM_001251,NM_001204510,NM_006942	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,+,+,+,+,-	EIF4A1,SNORA48,MPDU1,CD68,SNORA67,MPDU1,SNORD10,CD68,EIF4A1,SOX15	-9409,-7402,1508,-2627,-4160,1508,-5304,-2628,-9409,8082
chr17:72246229-72246566	chr17	+	72246382	72246574	True	NR_026914,NM_052869	chr17,chr17	-,+	MGC16275,TTYH2	-36922,-1928
chr13:38936167-38938029	chr13	+	38936196	38938004	True	NM_016179,NM_016617	chr13,chr13	-,+	TRPC4,UFM1	-492257,-12318
chr19:52492610-52493108	chr19	+	52492613	52492913	True	NM_024840,NM_021632	chr19,chr19	+,-	ZNF613,ZNF350	-61976,-2534
chr12:71005159-71007024	chr12	+	71005445	71007007	True	NM_002837,NM_014505	chr12,chr12	-,+	PTPRB,KCNMB4	-1821,-245442
chr16:89685307-89686382	chr16	+	89686268	89686378	True	NM_001083314,NM_001128141,NM_004413	chr16,chr16,chr16	-,+,+	CHMP1A,DPEP1,DPEP1	37801,-6603,621
chr9:136446995-136447860	chr9	+	136447030	136447844	True	NM_014694,NM_001080515	chr9,chr9	+,-	ADAMTSL2,FAM163B	-47107,-1662
chr6:131580193-131581074	chr6	+	131580199	131580749	True	NM_001431,NM_004842,NM_138633	chr6,chr6,chr6	-,+,+	EPB41L2,AKAP7,AKAP7	-195737,-8746,-8746
chr19:1606183-1606544	chr19	+	1606295	1606591	True	NM_006830,NR_026557	chr19,chr19	-,+	UQCR11,PLK5P	-812,-82268
chr4:188864822-188865555	chr4	+	188864841	188865531	True	NM_173553,NM_174900	chr4,chr4	-,+	TRIML2,ZFP42	160927,51393
chr11:43333852-43334379	chr11	+	43333978	43334379	True	NR_024625,NR_033868,NM_006595,NM_001142930,NM_001142931	chr11,chr11,chr11,chr11,chr11	+,-,+,+,+	API5,LOC399881,API5,API5,API5	-524,-43059,-524,-524,-524
chr7:28726078-28726384	chr7	+	28726145	28726420	True	NM_014817,NM_001011666	chr7,chr7	-,+	TRIL,CREB5	271660,-475
chr6:166075670-166075978	chr6	+	166075670	166076026	True	NM_001130690,NM_006661,NR_027284	chr6,chr6,chr6	-,-,+	PDE10A,PDE10A,LOC441177	-86,-86,325012
chr2:111437878-111438140	chr2	+	111437974	111438170	True	NM_004336,NM_001142807	chr2,chr2	-,+	BUB1,ACOXL	-2290,51979
chr19:48865077-48866427	chr19	+	48865163	48866443	True	NM_012451,NM_018273	chr19,chr19	+,-	SYNGR4,TMEM143	1207,793
chr7:1125026-1125367	chr7	+	1125057	1125239	True	NM_001098201,NM_001134395,NM_001505,NM_001039966	chr7,chr7,chr7,chr7	+,-,+,+	GPER,C7orf50,GPER,GPER	2483,52704,1203,1203
chr2:31457768-31459742	chr2	+	31458064	31459763	True	NM_014600,NM_001145122	chr2,chr2	+,-	EHD3,CAPN14	-1236,-17653
chr5:54582362-54583008	chr5	+	54582364	54582778	True	NM_019030,NM_015360	chr5,chr5	-,+	DHX29,SKIV2L2	20793,20797
chr15:82556764-82557776	chr15	+	82556782	82557425	True	NM_024580,NM_001008226,NM_001040610	chr15,chr15,chr15	-,+,-	EFTUD1,FAM154B,EFTUD1	-1678,-1693,-1678
chr16:76412701-76412973	chr16	+	76412742	76412974	True	NM_138994,NM_005548	chr16,chr16	+,-	CNTNAP4,KARS	-69058,-731157
chr2:192542485-192542695	chr2	+	192542515	192542615	True	NM_001031716,NR_024415,NM_004657	chr2,chr2,chr2	+,+,-	OBFC2A,OBFC2A,SDPR	245,182,169441
chr9:102585344-102585703	chr9	+	102585362	102585738	True	NM_173199,NM_015051,NM_173200,NM_006981	chr9,chr9,chr9,chr9	+,-,+,+	NR4A3,ERP44,NR4A3,NR4A3	-1276,275642,3270,-1276
chr10:120867209-120868257	chr10	+	120867270	120868152	True	NM_207009,NR_027141,NM_003750	chr10,chr10,chr10	+,+,-	FAM45A,FAM45B,EIF3A	-3723,-3705,-26936
chr2:113045472-113047194	chr2	+	113045573	113047242	True	NM_198581,NM_032494	chr2,chr2	+,-	ZC3H6,ZC3H8	-12462,-32909
chr10:106400700-106400916	chr10	+	106400732	106400902	True	NM_033397,NM_014978	chr10,chr10	-,+	ITPRIP,SORCS3	-307069,-21
chr19:50145841-50146979	chr19	+	50146034	50146949	True	NM_021228,NM_006270	chr19,chr19	+,-	SCAF1,RRAS	-703,-2634
chr12:59314167-59314435	chr12	+	59314191	59314391	True	NM_004731,NM_153377,NM_001136051	chr12,chr12,chr12	+,-,-	SLC16A7,LRIG3,LRIG3	768734,43,-864
chr9:72875320-72876897	chr9	+	72875597	72876851	True	NM_001206,NM_015110	chr9,chr9	-,+	KLF9,SMC5	152772,-1778
chr16:75249068-75249721	chr16	+	75249386	75249562	True	NM_001025200,NM_001906	chr16,chr16	-,+	CTRB2,CTRB1	-8314,3321
chr7:148821540-148821926	chr7	+	148821540	148821975	True	NM_001001661,NM_020781	chr7,chr7	-,+	ZNF425,ZNF398	1513,1532
chr8:145046422-145046828	chr8	+	145046495	145046853	True	NM_201378,NM_000837,NM_000445	chr8,chr8,chr8	-,+,-	PLEC,GRINA,PLEC	894,17372,4110
chr1:110950259-110950495	chr1	+	110950350	110950446	True	NM_032414,NM_006402	chr1,chr1	+,-	PROK1,HBXIP	43341,150
chr2:202558685-202559880	chr2	+	202558697	202559816	True	NM_033066,NM_139158	chr2,chr2	-,+	MPP4,CDK15	3660,111381
chr3:99355435-99356287	chr3	+	99355445	99356260	True	NM_020351,NM_014890,NM_001850	chr3,chr3,chr3	+,-,+	COL8A1,FILIP1L,COL8A1	1193,238836,1193
chr2:211339187-211340554	chr2	+	211339554	211340570	True	NM_001136575,NM_001136574,NM_006055,NM_001122633	chr2,chr2,chr2,chr2	-,-,-,+	LANCL1,LANCL1,LANCL1,CPS1	979,909,971,1835
chr1:1142679-1142999	chr1	+	1142872	1143048	True	NM_004195,NM_148901,NM_148902,NM_003327,NM_080605	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	TNFRSF18,TNFRSF18,TNFRSF18,TNFRSF4,B3GALT6	-783,-783,-783,6550,24580
chr22:30783554-30783791	chr22	+	30783560	30783712	True	NM_033382,NM_001204204,NM_001017981,NM_012429	chr22,chr22,chr22,chr22	+,+,-,+	SEC14L2,SEC14L2,RNF215,SEC14L2	9217,9217,-258,9217
chr19:7953052-7953341	chr19	+	7953058	7953318	True	NM_025061,NR_033250	chr19,chr19	+,-	LRRC8E,LOC388499	71,-7941
chr10:30994682-30995681	chr10	+	30994761	30995594	True	NM_183058,NM_005204	chr10,chr10	-,+	LYZL2,MAP3K8	-76114,-271946
chr3:125516408-125518210	chr3	+	125517169	125517731	True	NR_024250,NR_031687	chr3,chr3	+,-	LOC100125556,MIR548I1	117712,-7774
chr18:9477075-9478604	chr18	+	9477410	9478568	True	NM_001042388,NM_006788	chr18,chr18	-,+	PPP4R1,RALBP1	136082,-1931
chr22:22593411-22595389	chr22	+	22593674	22595387	True	NM_007128,NM_003935	chr22,chr22	+,-	VPREB1,TOP3B	3812,-256527
chr11:809213-809421	chr11	+	809287	809467	True	NM_001004,NM_145887,NR_002585,NM_145886,NM_020376	chr11,chr11,chr11,chr11,chr11	+,-,+,-,+	RPLP2,LRDD,SNORA52,LRDD,PNPLA2	468,-4037,2213,-4037,9433
chr1:221912231-221912480	chr1	+	221912270	221912518	True	NM_021958,NM_144729,NM_144728,NM_007207	chr1,chr1,chr1,chr1	+,-,-,-	HLX,DUSP10,DUSP10,DUSP10	-859578,3048,-1468,3048
chr11:12031746-12033072	chr11	+	12031862	12032916	True	NM_013253,NM_014632,NM_015881,NM_001018057	chr11,chr11,chr11,chr11	-,+,-,-	DKK3,MICAL2,DKK3,DKK3	-945,99221,-1233,-1676
chr13:21347885-21348515	chr13	+	21347893	21348253	True	NM_138284,NM_174928	chr13,chr13	+,-	IL17D,N6AMT2	-70462,-24
chr3:196668654-196669172	chr3	+	196668676	196669096	True	NM_007362,NR_024388,NM_001042540	chr3,chr3,chr3	-,+,-	NCBP2,LOC152217,NCBP2	418,397,418
chr22:29785828-29786675	chr22	+	29786256	29786561	True	NM_001127,NM_145730,NM_001166019,NM_021026	chr22,chr22,chr22,chr22	-,-,-,+	AP1B1,AP1B1,AP1B1,RFPL1	-1684,-1684,-1684,48010
chr10:62746722-62747401	chr10	+	62746732	62747380	True	NM_033379,NR_024554	chr10,chr10	+,-	CDK1,RHOBTB1	-208571,13406
chr7:27217541-27218783	chr7	+	27217594	27218774	True	NM_005523,NM_018951,NR_037940,NR_037939,NR_029911,NM_153715,NR_002795	chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,-,+	HOXA11,HOXA10,HOXA10-HOXA9,HOXA10,MIR196B,HOXA10,HOXA11-AS1	6114,-3639,1159,1159,-8412,1155,6252
chr3:11757698-11759002	chr3	+	11758034	11758969	True	NM_014667,NM_003178	chr3,chr3	-,+	VGLL4,SYN2	3305,286892
chr5:1800297-1800506	chr5	+	1800301	1800503	True	NM_004553,NM_032479	chr5,chr5	+,-	NDUFS6,MRPL36	992,-345
chr14:101031473-101032662	chr14	+	101031552	101032422	True	NR_024096,NM_001159531,NM_020836	chr14,chr14,chr14	+,-,-	C14orf70,BEGAIN,BEGAIN	91182,2035,3759
chr5:16608404-16609298	chr5	+	16608504	16609319	True	NM_001034850,NM_006317	chr5,chr5	-,+	FAM134B,BASP1	7856,608430
chr7:102212386-102212696	chr7	+	102212385	102212693	True	NM_001166339,NM_001097615	chr7,chr7	+,-	SPDYE2L,POLR2J3	-20759,425
chr7:102212386-102212696	chr7	+	44058128	44058434	False	NM_175064,NR_003655	chr7,chr7	+,-	SPDYE1,POLR2J4	-17692,364
chr7:102212386-102212696	chr7	+	102118722	102119029	False	NM_006234,NM_152892	chr7,chr7	-,+	POLR2J,LRWD1	402,-13385
chr7:102212386-102212696	chr7	+	102311465	102311773	False	NM_032959,NM_001166339	chr7,chr7	-,+	POLR2J2,SPDYE2L	459,-20746
chr6:15249910-15251333	chr6	+	15250047	15251241	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	-3571,412105
chr3:41237194-41238543	chr3	+	41237193	41238397	True	NM_001098209,NM_001098210,NM_017886,NM_001904	chr3,chr3,chr3,chr3	+,+,-,+	CTNNB1,CTNNB1,ULK4,CTNNB1	2544,2544,765313,2544
chr22:21386176-21386514	chr22	+	21386294	21386376	True	NM_004173,NR_027006	chr22,chr22	-,+	SLC7A4,LOC400891	521,13872
chr6:106769324-106770885	chr6	+	106769528	106770720	True	NM_004849,NM_001624	chr6,chr6	-,+	ATG5,AIM1	3026,189009
chr2:44400312-44400801	chr2	+	44400322	44400810	True	NM_001033557,NM_001033556,NM_177969,NM_177968,NM_002706,NM_133259	chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,+,-	PPM1B,PPM1B,PPM1B,PPM1B,PPM1B,LRPPRC	-4379,-4379,-4379,-4379,-4379,-177178
chr1:27481664-27482851	chr1	+	27481806	27482836	True	NM_015023,NM_003047	chr1,chr1	+,-	WDTC1,SLC9A1	78170,-355
chr17:4605568-4606190	chr17	+	4605833	4606205	True	NM_004313,NM_199004,NM_014389	chr17,chr17,chr17	+,+,-	ARRB2,ARRB2,PELP1	7583,7583,1477
chr15:70125202-70125780	chr15	+	70125376	70125812	True	NR_026764,NR_030714	chr15,chr15	+,-	C15orf50,MIR629	1760,246045
chr3:126705182-126705517	chr3	+	126705226	126705566	True	NM_032242,NM_052883	chr3,chr3	+,-	PLXNA1,TXNRD3	1870,-331259
chr11:117049099-117049605	chr11	+	117049101	117049557	True	NM_001040455,NM_004716	chr11,chr11	+,-	SIDT2,PCSK7	381,53304
chr16:88773090-88773337	chr16	+	88773224	88773288	True	NM_001171816,NM_001171815,NM_001012759,NM_178841,NM_001012762	chr16,chr16,chr16,chr16,chr16	-,-,+,-,+	RNF166,RNF166,CTU2,RNF166,CTU2	-3199,-424,-384,-395,-384
chr20:3147899-3148498	chr20	+	3147929	3148429	True	NM_014731,NM_014948,NM_199415,NM_021826,NM_033453	chr20,chr20,chr20,chr20,chr20	-,-,-,-,+	ProSAPiP1,UBOX5,UBOX5,FASTKD5,ITPA	828,-7389,-7389,-7397,41626
chr15:74531450-74532608	chr15	+	74531647	74532564	True	NM_001199040,NM_025055	chr15,chr15	-,+	STRA6,CCDC33	-29601,-3031
chr19:19741864-19742426	chr19	+	19742014	19742452	True	NM_004720,NM_033204	chr19,chr19	-,+	LPAR2,ZNF101	-2975,37210
chr16:2794664-2794899	chr16	+	2794751	2794903	True	NM_016333,NR_027274,NR_027275	chr16,chr16,chr16	+,-,-	SRRM2,LOC100128788,LOC100128788	7426,19,7748
chr7:86802774-86804495	chr7	+	86802870	86804245	True	NM_024315,NM_021145	chr7,chr7	-,+	C7orf23,DMTF1	44840,-21051
chr17:11508975-11509359	chr17	+	11509106	11509388	True	NM_144680,NM_001372	chr17,chr17	-,+	ZNF18,DNAH9	391351,-7416
chr9:97136122-97136588	chr9	+	97136344	97136634	True	NM_017561,NM_032558	chr9,chr9	-,+	FAM22F,HIATL1	-45418,198
chr19:43411643-43411871	chr19	+	43411674	43411874	True	NM_002782,NR_036584	chr19,chr19	-,+	PSG6,LOC100289650	10165,-85710
chr20:6747868-6748076	chr20	+	6747873	6748008	True	NM_017671,NM_001200	chr20,chr20	-,+	FERMT1,BMP2	-643682,736
chr18:34396730-34397692	chr18	+	34396866	34397352	True	NM_020776,NM_015476	chr18,chr18	+,-	KIAA1328,C18orf10	11727,11856
chr5:143560654-143562230	chr5	+	143560903	143562147	True	NM_020768,NM_030799	chr5,chr5	+,-	KCTD16,YIPF5	-10525,-10625
chr18:72122746-72123649	chr18	+	72123044	72123564	True	NM_001044369,NM_018235	chr18,chr18	-,+	FAM69C,CNDP2	989,39935
chr14:24871528-24872093	chr14	+	24871709	24872092	True	NM_001039771,NM_025081	chr14,chr14	-,+	CBLN3,NYNRIN	26690,-3768
chr14:68002901-68003983	chr14	+	68002939	68003383	True	NM_020715,NM_182526	chr14,chr14	+,-	PLEKHH1,TMEM229B	-2982,-20918
chr2:110650967-110651443	chr2	+	110650995	110651491	True	NR_036225,NR_038099,NR_027467,NM_001205288,NR_027145,NM_033514	chr2,chr2,chr2,chr2,chr2,chr2	-,+,+,+,+,+	MIR4267,LOC100288695,LIMS3,LOC100288695,LIMS3-LOC440895,LIMS3	176178,4517,4517,4517,4517,4517
chr2:110650967-110651443	chr2	-	111235169	111235665	False	NR_037626,NR_038099,NR_027467,NM_001205288,NR_027145,NM_033514	chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-	LOC100507334,LOC100288695,LIMS3,LOC100288695,LIMS3-LOC440895,LIMS3	-232005,-4517,-4517,-4517,-4517,-4517
chr1:234046951-234048079	chr1	+	234046954	234047950	True	NM_173508,NM_005646	chr1,chr1	+,-	SLC35F3,TARBP1	-6339,566949
chr22:51220135-51221838	chr22	+	51220252	51221740	True	NM_001003789,NM_001130919,NM_001130920,NM_001130921,NM_001130922,NM_001130923	chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,-,-	RABL2B,RABL2B,RABL2B,RABL2B,RABL2B,RABL2B	397,397,397,397,397,397
chr22:51220135-51221838	chr2	-	114385613	114386653	False	NM_007082,NR_000029,NM_013412,NR_024529,NR_024528,NR_024530,NR_024531	chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,-,+,-,-,-,-	RABL2A,RPL23AP7,RABL2A,RPL23AP7,RPL23AP7,RPL23AP7,RPL23AP7	-847,-898,-847,-898,-898,-898,-898
chr19:29377902-29379182	chr19	+	29378003	29379135	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	76902,325051
chr2:220092434-220093383	chr2	+	220092478	220093424	True	NM_024085,NM_001077198,NM_018089,NM_001042410,NM_005689	chr2,chr2,chr2,chr2,chr2	-,-,+,+,-	ATG9A,ATG9A,ANKZF1,ANKZF1,ABCB6	987,987,1054,1185,-8766
chr3:151095771-151097641	chr3	+	151095951	151097685	True	NM_022788,NR_031678	chr3,chr3	-,+	P2RY12,MIR548H2	4909,249634
chr2:155569104-155569927	chr2	+	155569142	155569951	True	NM_019845,NM_002239	chr2,chr2	-,+	RPRM,KCNJ3	-1233820,-14112
chr3:171181111-171181512	chr3	+	171181362	171181508	True	NM_015028,NM_001164436,NR_027767,NM_001161566,NM_001161564,NM_001161565,NM_001161562,NM_001161563,NM_001161560,NM_001161561	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-,-,-,-,-	TNIK,TMEM212,TNIK,TNIK,TNIK,TNIK,TNIK,TNIK,TNIK,TNIK	-3165,379630,-3165,-3165,-3165,-3165,-3165,-3165,-3165,-3165
chr17:7833932-7834691	chr17	+	7833945	7834611	True	NM_053051,NR_030697,NM_001166621,NR_030684,NM_004732,NM_001037144,NM_021210	chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,-,-,+,-	CNTROB,TRAPPC1,TRAPPC1,TRAPPC1,KCNAB3,CNTROB,TRAPPC1	861,756,756,706,-1192,861,706
chr6:160509586-160509981	chr6	+	160509643	160509964	True	NR_003288,NM_003058	chr6,chr6	+,-	LOC729603,SLC22A2	4149,170049
chr11:65190997-65191225	chr11	+	65191071	65191271	True	NR_028272,NM_182556	chr11,chr11	+,-	NEAT1,SLC25A45	-854,-40929
chr10:97052102-97052754	chr10	+	97052220	97052732	True	NM_207321,NM_020992	chr10,chr10	+,-	C10orf129,PDLIM1	-98321,-1439
chr10:105614329-105614751	chr10	+	105614359	105614737	True	NM_014631,NM_014720	chr10,chr10	-,+	SH3PXD2A,SLK	477,112732
chr6:107436782-107436997	chr6	+	107436817	107436960	True	NM_001080450,NM_016487	chr6,chr6	-,+	BEND3,C6orf203	-1181,-87461
chr9:35097161-35098508	chr9	+	35097640	35098301	True	NM_032634,NM_203299,NM_152850,NM_013442,NM_001201484	chr9,chr9,chr9,chr9,chr9	-,+,-,-,-	PIGO,C9orf131,PIGO,STOML2,PIGO	-1094,-55468,-1042,4903,-1094
chr5:54468830-54469035	chr5	+	54468837	54468929	True	NR_031572,NR_030387,NR_029960,NM_001145734,NM_152623,NM_001170402,NM_001008397	chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,-,-,+	MIR449C,MIR449B,MIR449A,CDC20B,CDC20B,CDC20B,GPX8	-656,-2267,-2387,126,126,126,-12904
chr16:403410-403618	chr16	+	403545	403661	True	NM_181050,NM_003502,NR_024453	chr16,chr16,chr16	-,-,+	AXIN1,AXIN1,LOC100134368	-869,-869,28579
chr19:51274918-51275975	chr19	+	51274956	51275920	True	NR_003068,NM_001506	chr19,chr19	-,+	SNORD88B,GPR32	26512,-1149
chr19:51274918-51275975	chr19	+	51262725	51262775	False	NR_003068,NM_001506	chr19,chr19	-,+	SNORD88B,GPR32	39657,11082
chr10:99092903-99093385	chr10	+	99092933	99093361	True	NM_005479,NM_012083	chr10,chr10	+,-	FRAT1,FRAT2	-13962,1147
chr17:73635268-73636005	chr17	+	73635273	73635983	True	NR_028439,NM_001162997,NM_001162995,NM_004259	chr17,chr17,chr17,chr17	+,+,+,-	LOC643008,LOC100130933,LOC643008,RECQL5	-2649,6662,-5810,27332
chr22:30822057-30823079	chr22	+	30822278	30822984	True	NM_001017981,NM_001003704,NM_016498	chr22,chr22,chr22	-,+,+	RNF215,MTFP1,MTFP1	-38976,-718,-718
chr8:27183588-27184443	chr8	+	27183771	27184365	True	NM_173176,NM_173175,NM_004103,NM_171982	chr8,chr8,chr8,chr8	+,+,+,-	PTK2B,PTK2B,PTK2B,TRIM35	-826,-741,-3903,-14937
chr2:86325823-86327058	chr2	+	86325919	86327104	True	NM_015425,NM_017952	chr2,chr2	-,+	POLR1A,PTCD3	6224,6200
chr4:49287018-49288229	chr4	+	49287293	49288205	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-299079,-378478
chr4:49287018-49288229	chr4	-	49326091	49327003	False	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-337877,-417276
chr6:3906290-3906650	chr6	+	3906319	3906529	True	NM_183373,NM_012135	chr6,chr6	-,+	C6orf145,FAM50B	-154073,-56738
chr5:177539860-177540165	chr5	+	177539952	177540202	True	NM_015111,NM_001034833	chr5,chr5	+,-	N4BP3,NHP2	353,40809
chrY:59327396-59328940	chrY	+	59327920	59328679	True	NR_002179,NM_002186	chrY,chrY	-,+	TTTY17C,IL9R	-31997000,1572
chrY:59327396-59328940	chrX	+	155224914	155225673	False	NM_002186,NM_018196	chrX,chrX	+,-	IL9R,TMLHE	1572,-382292
chr3:68954616-68956104	chr3	+	68954853	68955888	True	NM_006407,NM_001005527	chr3,chr3	+,-	ARL6IP5,FAM19A4	178201,25877
chr14:19422393-19422656	chr22	-	16404863	16404913	True	NM_001005239,NR_001591	chr22,chr22	-,+	OR11H1,psiTPTE22	44941,677887
chr14:19422393-19422656	chr14	+	19422484	19422699	False	NM_001145442,NM_001013354	chr14,chr14	-,+	POTEM,OR11H12	597623,-44941
chr17:7341894-7342897	chr17	+	7342120	7342628	True	NM_152766,NM_000747,NM_178518,NM_004112	chr17,chr17,chr17,chr17	-,+,+,+	C17orf61,CHRNB1,TMEM102,FGF11	-34670,5777,-3409,60
chr19:57831703-57832013	chr19	+	57831754	57831982	True	NM_020633,NM_213598	chr19,chr19	-,+	VN1R1,ZNF543	136175,-6
chr2:109213978-109214307	chr2	+	109213977	109214040	True	NM_004987,NM_022336,NM_001193488,NM_001193482	chr2,chr2,chr2,chr2	+,-,+,+	LIMS1,EDAR,LIMS1,LIMS1	-9261,391839,-9106,9576
chr14:24425531-24426105	chr14	+	24425590	24426155	True	NR_023924,NR_023922,NR_023923,NM_021004,NR_023921	chr14,chr14,chr14,chr14,chr14	-,-,-,+,-	C14orf167,C14orf167,C14orf167,DHRS4,C14orf167	-2198,-1292,-2198,-2676,-2198
chr14:24425531-24426105	chr14	+	24461236	24461287	False	NR_023922,NM_198083	chr14,chr14	-,+	C14orf167,DHRS4L2	-36938,-3261
chr14:24425531-24426105	chr14	+	24508360	24508410	False	NM_006177,NM_001082488	chr14,chr14	-,+	NRL,DHRS4L1	45472,-2701
chr6:26400472-26401791	chr6	+	26400920	26401674	True	NM_194441,NM_001145009,NM_001145008,NM_003543,NM_007048	chr6,chr6,chr6,chr6,chr6	+,+,+,-,+	BTN3A1,BTN3A1,BTN3A1,HIST1H4H,BTN3A1	790,790,790,-115193,790
chr20:34254068-34254858	chr20	+	34254589	34254716	True	NM_080748,NM_152838,NM_001198863,NM_006047,NM_001198838,NR_037188,NM_152928,NM_152925,NM_152926,NM_152927,NM_001198840	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,-,-,-,-,-,-,-,-,-,-	ROMO1,RBM12,CPNE1,RBM12,RBM12,CPNE1,CPNE1,CPNE1,CPNE1,CPNE1,RBM12	32515,-1711,-1711,-1711,-1711,-1730,-1711,-1711,-1711,-1711,-1711
chr21:46032332-46032599	chr21	+	46032373	46032545	True	NM_198695,NM_198688	chr21,chr21	+,-	KRTAP10-8,KRTAP10-6	-428,-19987
chr19:11492392-11492646	chr19	+	11492394	11492656	True	NM_000121,NM_175871,NR_033663	chr19,chr19,chr19	-,+,-	EPOR,C19orf39,EPOR	2412,-7062,2412
chr7:117065615-117065911	chr7	+	117065701	117065767	True	NR_023315,NM_000492,NM_130768	chr7,chr7,chr7	-,+,-	ASZ1,CFTR,ASZ1	1862,54249,1862
chr3:45835073-45835304	chr3	+	45835142	45835332	True	NM_006641,NM_020208,NM_022405	chr3,chr3,chr3	+,-,-	CCR9,SLC6A20,SLC6A20	92663,2753,2753
chr1:33640731-33642162	chr1	+	33640952	33642188	True	NM_152493,NM_018207	chr1,chr1	+,-	ZNF362,TRIM62	79985,5533
chr18:55254090-55255606	chr18	+	55254152	55255353	True	NM_001012515,NM_004852,NM_000140	chr18,chr18,chr18	-,+,-	FECH,ONECUT2,FECH	-183,-151286,-183
chr17:21824594-21825430	chr17	+	21824598	21825390	True	NM_001113434,NR_028336	chr17,chr17	-,+	C17orf51,FAM27L	-369657,-15
chr17:21824594-21825430	chr17	-	21478429	21478479	False	NM_001113434,NM_001194958	chr17,chr17	-,+	C17orf51,KCNJ18	-23488,-170032
chr19:9734811-9735374	chr19	+	9735128	9735256	True	NM_001048241,NM_152289	chr19,chr19	+,-	UBL5,ZNF561	203311,-3212
chr10:48814320-48815180	chr10	+	48814324	48814980	True	NM_001042357,NM_153034,NM_001042389	chr10,chr10,chr10	-,+,-	PTPN20B,ZNF488,PTPN20A	-7339,-459299,-7339
chr10:48814320-48815180	chr10	+	49334836	49335492	False	NR_033172,NM_002750	chr10,chr10	-,+	FRMPD2P1,MAPK8	47798,274194
chr10:48814320-48815180	chr10	+	46627391	46628048	False	NR_027632,NM_001042357,NM_001042389	chr10,chr10,chr10	+,-,-	FAM35B,PTPN20B,PTPN20A	269592,-7333,-7333
chr4:3957253-3957725	chr4	+	3957518	3957774	True	NM_000683,NR_024253	chr4,chr4	+,-	ADRA2C,LOC348926	-189273,-370
chr1:53610936-53611603	chr1	+	53610969	53611557	True	NM_000098,NM_006671	chr1,chr1	+,-	CPT2,SLC1A7	50543,-2680
chr12:124468756-124469161	chr12	+	124468761	124469077	True	NM_025140,NM_001204299	chr12,chr12	-,+	CCDC92,ZNF664-FAM101A	-11598,-11050
chr14:105556733-105557109	chr14	+	105556737	105557135	True	NM_174891,NM_013345	chr14,chr14	+,-	C14orf79,GPR132	-104172,-24983
chr3:36769961-36770720	chr3	+	36769970	36770718	True	NM_000249,NM_033403	chr3,chr3	+,-	MLH1,DCLK3	264122,10684
chr17:27506453-27506824	chr17	+	27506648	27506864	True	NM_203318,NM_005208,NM_078471	chr17,chr17,chr17	-,+,-	MYO18A,CRYBA1,MYO18A	593,67010,593
chr20:31331812-31332351	chr20	+	31331892	31332362	True	NM_006892,NM_001099339,NM_053041	chr20,chr20,chr20	+,-,-	DNMT3B,COMMD7,COMMD7	17828,-78,-78
chrX:150679956-150680514	chrX	+	150680008	150680207	True	NR_029973,NM_173493	chrX,chrX	-,+	MIR452,PASD1	448034,51799
chr20:2908578-2910190	chr20	+	2908672	2910139	True	NM_022760,NM_080841	chr20,chr20	-,+	FAM113A,PTPRA	-87340,-4881
chrX:118108175-118108507	chrX	+	118108358	118108556	True	NM_001031855,NM_024778,NM_020721	chrX,chrX,chrX	+,+,-	LONRF3,LONRF3,KIAA1210	156,156,176036
chr19:11618612-11619526	chr19	+	11618642	11619094	True	NM_138783,NM_001299	chr19,chr19	-,+	ZNF653,CNN1	-1904,30484
chr11:102999390-102999798	chr11	+	102999390	102999744	True	NM_001377,NM_032299	chr11,chr11	+,-	DYNC2H1,DCUN1D5	-19282,-36446
chr13:100260620-100261521	chr13	+	100260634	100261345	True	NM_004951,NM_206808	chr13,chr13	-,+	GPR183,CLYBL	-300885,-1766
chr5:52084181-52085479	chr5	+	52084428	52085508	True	NM_004531,NM_015946,NM_181501	chr5,chr5,chr5	-,+,+	MOCS2,PELO,ITGA1	319867,-705,-343
chr13:36698270-36700034	chr13	+	36698282	36699804	True	NM_001111046,NM_004734	chr13,chr13	+,-	CCNA1,DCLK1	306162,5768
chr17:2697857-2698465	chr17	+	2697981	2698151	True	NM_001100398,NM_015085,NR_031654	chr17,chr17,chr17	+,+,-	RAP1GAP2,RAP1GAP2,MIR1253	1580,1580,-46505
chr22:39638937-39639149	chr22	+	39639026	39639144	True	NM_145731,NM_002608,NM_033016	chr22,chr22,chr22	+,-,-	SYNGR1,PDGFB,PDGFB	106809,1863,-2112
chr2:86563751-86563982	chr2	+	86563822	86563942	True	NM_018433,NM_001164730,NM_001164731,NM_001164732,NM_022912	chr2,chr2,chr2,chr2,chr2	+,-,-,-,-	KDM3A,REEP1,REEP1,REEP1,REEP1	104328,1314,885,885,885
chr10:88412954-88414396	chr10	+	88413273	88414351	True	NM_033282,NM_015045,NM_001030015	chr10,chr10,chr10	+,-,+	OPN4,WAPAL,OPN4	-38,-131732,-38
chr3:48933342-48934246	chr3	+	48933827	48934280	True	NM_006321,NM_000387	chr3,chr3	+,-	ARIH2,SLC25A20	22000,2196
chr7:66097213-66097898	chr7	+	66097491	66097735	True	NM_153033,NM_001167961,NR_002933	chr7,chr7,chr7	+,+,-	KCTD7,KCTD7,LOC493754	-3674,-3674,-53993
chr12:52684822-52685046	chr12	+	52684848	52684930	True	NM_002284,NM_002281	chr12,chr12	+,-	KRT86,KRT81	10718,419
chr12:52684822-52685046	chr12	+	52760769	52760819	False	NM_002284,NM_002283	chr12,chr12	+,-	KRT86,KRT85	-65171,540
chr12:52684822-52685046	chr12	-	52696019	52696101	False	NM_002284,NM_002281	chr12,chr12	+,-	KRT86,KRT81	-421,-10720
chr6:27978338-27980014	chr6	+	27978557	27979899	True	NM_033057,NM_012367	chr6,chr6	-,+	OR2B2,OR2B6	-98383,-53590
chr14:77647564-77647872	chr14	+	77647608	77647920	True	NM_174976,NM_020431	chr14,chr14	-,+	ZDHHC22,TMEM63C	-39474,181
chr3:43328627-43329301	chr3	+	43328762	43329335	True	NM_017719,NM_032806,NM_001100594	chr3,chr3,chr3	+,-,+	SNRK,C3orf39,SNRK	-809,-181197,-809
chr16:30380181-30380711	chr16	+	30380203	30380705	True	NM_013292,NM_015527	chr16,chr16	+,-	MYLPF,TBC1D10B	5417,867
chr17:76374317-76374545	chr17	+	76374460	76374558	True	NM_003955,NM_024419	chr17,chr17	-,+	SOCS3,PGS1	-18302,176
chr11:61524665-61525607	chr11	+	61524757	61525547	True	NR_026882,NM_013279,NM_001127392	chr11,chr11,chr11	-,+,+	DKFZP434K028,C11orf9,C11orf9	-41,-1947,-4687
chr20:2274332-2274596	chr20	+	2274354	2274594	True	NR_003684,NM_003245	chr20,chr20	-,+	SNORD119,TGM3	169149,2018
chr13:21098988-21099659	chr13	+	21099024	21099601	True	NM_006531,NM_015974	chr13,chr13	+,-	IFT88,CRYL1	41606,461
chr1:2457115-2457330	chr1	+	2457134	2457322	True	NM_018216,NM_003820,NM_001010926	chr1,chr1,chr1	-,+,-	PANK4,TNFRSF14,HES5	763,30482,4412
chrX:102569584-102571495	chrX	+	102570047	102571395	True	NM_152278,NM_001168399,NM_001168400,NM_001168401,NM_032621	chrX,chrX,chrX,chrX,chrX	+,-,-,-,-	TCEAL7,BEX2,BEX2,BEX2,BEX2	13718,-4164,-4164,-4109,-4073
chr12:4726638-4728440	chr12	+	4727084	4728197	True	NM_006422,NM_003845	chr12,chr12	-,+	AKAP3,DYRK4	26203,-27903
chr8:11627379-11627604	chr8	+	11627378	11627604	True	NM_001135747,NM_001135746,NM_145043,NM_001908,NM_001135748	chr8,chr8,chr8,chr8,chr8	+,+,+,-,+	NEIL2,NEIL2,NEIL2,CTSB,NEIL2	-257,-257,-257,98092,-257
chr17:4678594-4679890	chr17	+	4678913	4679939	True	NM_001144939,NM_001144941,NM_001144940,NM_003963,NM_182566	chr17,chr17,chr17,chr17,chr17	-,-,-,+,-	VMO1,VMO1,VMO1,TM4SF5,VMO1	9840,9840,9840,-3784,9840
chr17:80332953-80333196	chr17	+	80332974	80333192	True	NM_003004,NM_018949	chr17,chr17	-,+	SECTM1,UTS2R	-41053,-824
chr17:79482960-79483615	chr17	+	79483172	79483465	True	NM_001077182,NM_001199954,NM_001614,NR_037688	chr17,chr17,chr17,chr17	+,-,-,-	FSCN2,ACTG1,ACTG1,ACTG1	11951,-3280,-3280,-3280
chr13:65532122-65533137	chr13	+	65532287	65533116	True	NR_002171,NM_020403	chr13,chr13	+,-	OR7E156P,PCDH9	-1220770,2271403
chr2:219154219-219155312	chr2	+	219154478	219155168	True	NM_015488,NM_022152	chr2,chr2	+,-	PNKD,TMBIM1	-19414,2162
chrX:105065381-105065667	chrX	+	105065421	105065637	True	NM_198465,NM_000354	chrX,chrX	+,-	NRK,SERPINA7	898,217131
chr21:14981147-14981472	chr21	+	14981376	14981448	True	NR_036164,NM_174981	chr21,chr21	-,+	MIR3156-3,POTED	-202595,1049
chr22:17082183-17082426	chr22	+	17082237	17082315	True	NM_014406,NR_001591	chr22,chr22	-,+	CCT8L2,psiTPTE22	-8537,485
chr19:34920631-34921107	chr19	+	34920756	34921163	True	NR_027620,NM_005499	chr19,chr19	-,+	LOC643719,UBA2	147490,-1544
chr20:58299340-58299614	chr20	+	58299358	58299595	True	NM_014258,NM_183246,NM_183244	chr20,chr20,chr20	-,+,+	SYCP2,PHACTR3,PHACTR3	207665,-3144,-3144
chr14:92041616-92041988	chr14	+	92041625	92041857	True	NR_003709,NM_001080113	chr14,chr14	+,-	SNORA11B,C14orf184	-448906,-242
chr13:82262811-82264187	chr13	+	82262893	82263529	True	NM_019080,NM_005842	chr13,chr13	+,-	NDFIP2,SPRY2	-2207685,-1347807
chr9:127614740-127614949	chr9	+	127614780	127614990	True	NM_007209,NM_001045476	chr9,chr9	-,+	RPL35,WDR38	9300,764
chr11:71901668-71902282	chr11	+	71901733	71902317	True	NM_016725,NM_000802,NM_005169,NM_016729,NM_016724	chr11,chr11,chr11,chr11,chr11	+,+,-,+,+	FOLR1,FOLR1,PHOX2A,FOLR1,FOLR1	-1196,-839,52953,855,-1196
chr10:94334257-94335301	chr10	+	94334509	94335011	True	NM_004969,NM_004523	chr10,chr10	-,+	IDE,KIF11	-657,17813
chr2:37383384-37383858	chr2	+	37383484	37383811	True	NM_001135651,NR_037879,NM_001135652,NM_002759	chr2,chr2,chr2,chr2	-,+,-,-	EIF2AK2,LOC100505876,EIF2AK2,EIF2AK2	432,39823,-8519,432
chr22:46935217-46935936	chr22	+	46935291	46935759	True	NM_015124,NM_014246	chr22,chr22	+,-	GRAMD4,CELSR1	86898,-2224
chr8:144790321-144790723	chr8	+	144790334	144790744	True	NM_001162914,NM_139021	chr8,chr8	-,+	LOC100130274,MAPK15	-55,7762
chr1:154187964-154188404	chr1	+	154188050	154188316	True	NM_015449,NM_138740,NM_014847,NM_001098616,NM_001010979,NM_001127320	chr1,chr1,chr1,chr1,chr1,chr1	-,-,+,-,-,+	C1orf43,C1orf43,UBAP2L,C1orf43,C1orf189,UBAP2L	5014,5014,5008,5014,-9241,4338
chr19:53140067-53140954	chr19	+	53140205	53140942	True	NM_001105551,NM_001105550,NM_001105553,NM_001105552,NM_001105554,NM_018300,NR_023311,NM_001105549	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,+,-	ZNF83,ZNF83,ZNF83,ZNF83,ZNF83,ZNF83,ZNF137P,ZNF83	752,752,752,752,752,752,-40321,752
chr2:68545179-68545547	chr2	+	68545207	68545581	True	NM_015463,NM_002664,NM_001111101	chr2,chr2,chr2	-,+,-	CNRIP1,PLEK,CNRIP1	1652,46740,1652
chr5:150038620-150039486	chr5	+	150038685	150039457	True	NM_001122853,NM_018047,NM_133371	chr5,chr5,chr5	+,-,+	MYOZ3,RBM22,MYOZ3	946,41262,946
chr7:99721682-99723160	chr7	+	99721986	99723063	True	NM_139315,NM_152755,NM_001190415,NR_033792,NM_203397,NM_005641	chr7,chr7,chr7,chr7,chr7,chr7	-,+,-,-,+,-	TAF6,CNPY4,TAF6,TAF6,MBLAC1,TAF6	-4965,-4772,-4505,-4991,1256,-4991
chr10:96101811-96102562	chr10	+	96101852	96102386	True	NM_022451,NM_015188	chr10,chr10	-,+	NOC3L,TBC1D12	20347,59799
chr10:76586193-76586510	chr10	+	76586239	76586393	True	NM_001003892,NM_012330	chr10,chr10	-,+	DUPD1,MYST4	231929,0
chr1:26345969-26347605	chr1	+	26346081	26347191	True	NM_004455,NM_000437	chr1,chr1	+,-	EXTL1,PAFAH2	1079,-21433
chr10:135120146-135120425	chr10	+	135120312	135120400	True	NM_145806,NM_006659	chr10,chr10	+,-	ZNF511,TUBGCP2	2022,2294
chr10:50968377-50968998	chr10	+	50968522	50969042	True	NM_001143997,NM_001143996,NM_182554,NM_018245	chr10,chr10,chr10,chr10	-,-,+,-	OGDHL,OGDHL,C10orf53,OGDHL	1433,1433,-80889,1433
chr17:15581455-15582895	chr17	+	15581775	15582934	True	NM_006470,NM_001130842	chr17,chr17	-,+	TRIM16,ZNF286A	3312,19956
chr17:15581455-15582895	chr17	-	18606810	18606860	False	NM_001145045,NM_001037330	chr17,chr17	-,+	ZNF286B,TRIM16L	-21238,18541
chr19:51568558-51569546	chr19	+	51568679	51569591	True	NM_015596,NM_014441	chr19,chr19	-,+	KLK13,SIGLEC9	-312,58545
chr2:139659314-139659663	chr2	+	139659354	139659706	True	NM_007226,NR_033658	chr2,chr2	-,+	NXPH2,LOC647012	-121543,-4518
chr5:141992881-141993261	chr5	+	141992908	141993292	True	NM_001144892,NM_001135608,NM_033137	chr5,chr5,chr5	-,+,-	FGF1,ARHGAP26,FGF1	7665,156999,484
chr13:76361531-76363273	chr13	+	76361644	76363135	True	NM_203497,NM_015842	chr13,chr13	-,+	COMMD6,LMO7	-249653,-26907
chr19:49589468-49589974	chr19	+	49589524	49589920	True	NM_031886,NM_003089	chr19,chr19	-,+	KCNA7,SNRNP70	-13326,-1110
chr8:143834785-143836566	chr8	+	143835450	143836592	True	NM_016647,NM_205545	chr8,chr8	+,-	C8orf55,LYPD2	-26880,-1498
chr19:37712780-37713573	chr19	+	37712923	37713625	True	NM_152279,NM_152604	chr19,chr19	-,+	ZNF585B,ZNF383	-11472,3740
chr19:17514199-17514463	chr19	+	17514295	17514431	True	NM_004335,NM_138401	chr19,chr19	-,+	BST2,FAM125A	2003,16480
chr5:112044020-112045524	chr5	+	112044097	112045132	True	NM_001127511,NM_005669	chr5,chr5	+,-	APC,REEP5	-946,212951
chr11:107436001-107436256	chr11	+	107436073	107436289	True	NM_138775,NM_001130037	chr11,chr11	-,+	ALKBH8,ELMOD1	222,25527
chr17:61553397-61553833	chr17	+	61553447	61553725	True	NM_152830,NM_001915,NM_000789,NM_001178057	chr17,chr17,chr17,chr17	+,-,+,+	ACE,CYB561,ACE,ACE	8452,-29725,696,8452
chr19:10543230-10543866	chr19	+	10543235	10543903	True	NM_007065,NM_001111309,NM_001111308	chr19,chr19,chr19	-,+,+	CDC37,PDE4A,PDE4A	-28964,-175,-1765
chr13:48576238-48578087	chr13	+	48576337	48577144	True	NM_003850,NM_018283	chr13,chr13	-,+	SUCLA2,NUDT15	-875,34558
chr1:245318644-245318855	chr1	+	245318655	245318837	True	NM_018012,NM_031844	chr1,chr1	+,-	KIF26B,HNRNPU	-419,-290828
chr5:135284062-135284454	chr5	+	135284061	135284199	True	NM_002302,NM_012159	chr5,chr5	-,+	LECT2,FBXL21	6586,-18115
chr7:86975019-86975959	chr7	+	86975271	86976004	True	NM_001143935,NM_021151,NR_026585,NR_015381	chr7,chr7,chr7,chr7	+,+,+,-	CROT,CROT,CROT,TP53TG1	-371,-371,-371,-463
chr5:178323498-178325081	chr5	+	178323670	178324931	True	NM_000843,NM_030613	chr5,chr5	-,+	GRM6,ZFP2	97255,-818
chr11:1619954-1621747	chr11	+	1620104	1621673	True	NM_001012708,NR_021489,NM_001004325	chr11,chr11,chr11	-,+,-	KRTAP5-3,LOC338651,KRTAP5-2	8082,-26184,-580
chr1:203095745-203096151	chr1	+	203095934	203096164	True	NM_001048230,NM_000674,NM_002479	chr1,chr1,chr1	+,+,-	ADORA1,ADORA1,MYOG	671,671,-40557
chr10:102506897-102507337	chr10	+	102507301	102507375	True	NM_003990,NM_005004,NM_003989,NM_003988,NM_003987,NM_000278	chr10,chr10,chr10,chr10,chr10,chr10	+,-,+,+,+,+	PAX2,NDUFB8,PAX2,PAX2,PAX2,PAX2	-1886,-217665,-1886,-1886,-1886,-1886
chr10:51225055-51225941	chr10	+	51225493	51225573	True	NM_001077686,NM_002443	chr10,chr10	-,+	AGAP8,MSMB	21012,323979
chr11:56152867-56153936	chr11	+	56152997	56153937	True	NM_001004744,NM_001005204,NM_001013356	chr11,chr11,chr11	-,+,+	OR5R1,OR8U1,OR8U8	31828,-9953,-9953
chr12:53662542-53664090	chr12	+	53662550	53663806	True	NM_012291,NM_000966	chr12,chr12	+,-	ESPL1,RARG	-518,-36514
chr15:34781290-34781525	chr15	+	34781322	34781570	True	NM_175741,NR_036050	chr15,chr15	+,-	C15orf55,MIR1233-1	-143307,39052
chr3:73108460-73108940	chr3	+	73108464	73108805	True	NM_018029,NM_018130	chr3,chr3	+,-	EBLN2,SHQ1	2004,-210866
chr2:34111397-34112171	chr2	+	34111400	34111879	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-372515,-158116
chr12:3982014-3982245	chr12	+	3982100	3982283	True	NM_019854,NM_020367	chr12,chr12	+,-	PRMT8,PARP11	-381731,375
chr3:44754585-44755163	chr3	+	44754585	44754898	True	NM_020696,NM_033210,NM_001134442,NM_001134441,NM_001134440	chr3,chr3,chr3,chr3,chr3	-,+,+,+,+	KIAA1143,ZNF502,ZNF502,ZNF502,ZNF502	48326,-501,-501,-501,-501
chr6:52929605-52930076	chr6	+	52929678	52930063	True	NM_012347,NM_014920,NM_033481,NM_033480,NM_016513	chr6,chr6,chr6,chr6,chr6	+,-,+,+,-	FBXO9,ICK,FBXO9,FBXO9,ICK	5707,-3078,-60,193,-3078
chr15:27217455-27218016	chr15	+	27217470	27218044	True	NM_021912,NM_033223	chr15,chr15	-,+	GABRB3,GABRG3	-198535,-1092
chr1:16942914-16944128	chr1	+	16943468	16944111	True	NR_027504,NM_017940	chr1,chr1	+,-	MST1P2,NBPF1	27957,-3486
chrX:48916862-48917266	chrX	+	48917010	48917266	True	NM_007213,NM_033626,NM_001163322,NM_001163323,NM_001163321	chrX,chrX,chrX,chrX,chrX	-,+,+,+,+	PRAF2,CCDC120,CCDC120,CCDC120,CCDC120	14446,-545,-545,-538,-538
chr7:123298187-123298832	chr7	+	123298204	123298802	True	NM_207163,NM_003941	chr7,chr7	+,-	LMOD2,WASL	-2394,90372
chr20:24973870-24975103	chr20	+	24973906	24975098	True	NM_003650,NM_020531	chr20,chr20	+,-	CST7,C20orf3	-44099,-481
chr7:19156301-19156736	chr7	+	19156368	19156650	True	NM_001204148,NM_000474	chr7,chr7	+,-	HDAC9,TWIST1	-607519,695
chr2:228333782-228335114	chr2	+	228334034	228334932	True	NM_024795,NM_001135187,NM_001135189,NM_001135188,NM_004504	chr2,chr2,chr2,chr2,chr2	-,+,+,+,+	TM4SF20,AGFG1,AGFG1,AGFG1,AGFG1	-90012,1955,1955,1955,1955
chr2:48539934-48540669	chr2	+	48540261	48540691	True	NM_001190274,NM_002158	chr2,chr2	-,+	FBXO11,FOXN2	-407329,1103
chr9:136214811-136215014	chr9	+	136214988	136215062	True	NM_133640,NM_000972,NM_181491,NR_000017,NR_002447,NM_003172,NM_017503,NR_002448,NR_000016	chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,+,-,+,+,-,+,+,+	MED22,RPL7A,MED22,SNORD36B,SNORD24,SURF1,SURF2,SNORD36A,SNORD36C	-16,6,-16,1886,1188,8349,8358,2248,2638
chr22:38238911-38239150	chr22	+	38238914	38239126	True	NM_138797,NR_030395,NM_016091,NR_036556,NR_030396	chr22,chr22,chr22,chr22,chr22	-,-,+,-,-	ANKRD54,MIR658,EIF3L,ANKRD54,MIR659	1287,1312,6243,1287,4715
chr2:37464003-37464204	chr2	+	37464032	37464113	True	NM_144736,NM_005760,NM_001083946	chr2,chr2,chr2	+,-,+	C2orf56,CEBPZ,C2orf56	-5318,-5292,-5318
chr22:28692245-28693321	chr22	+	28692279	28693163	True	NR_036169,NR_036170	chr22,chr22	-,+	MIR3199-1,MIR3199-2	-375679,-375816
chr19:52844024-52844653	chr19	+	52844230	52844540	True	NM_001161427,NM_001161426,NM_001161425,NM_001102657,NM_173530	chr19,chr19,chr19,chr19,chr19	+,+,+,-,+	ZNF610,ZNF610,ZNF610,ZNF836,ZNF610	-4783,-4783,-4783,-169334,4141
chr5:142783999-142784367	chr5	+	142784163	142784334	True	NM_001024094,NM_001204261,NM_001204260,NM_001204263,NM_001204262,NM_001204265,NM_001204264,NM_000176,NM_021182,NM_001204258,NM_001204259,NM_001018076,NM_001020825	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,-,-,-,-,+,-,-,-,-	NR3C1,NR3C1,NR3C1,NR3C1,NR3C1,NR3C1,NR3C1,NR3C1,HMHB1,NR3C1,NR3C1,NR3C1,NR3C1	-909,-909,-909,-909,-909,-909,-909,-909,407391,-909,-909,-118,-909
chr6:87651008-87652716	chr6	+	87651105	87652752	True	NM_000735,NM_000865	chr6,chr6	-,+	CGA,HTR1E	152122,-4134
chr11:36430874-36431811	chr11	+	36430981	36431823	True	NM_001160169,NM_004620	chr11,chr11	+,-	PRR5L,TRAF6	-8492,100049
chr12:75699463-75699956	chr12	+	75699475	75699947	True	NM_032606,NM_152779	chr12,chr12	-,+	CAPS2,GLIPR1L1	23939,28515
chrX:109764442-109764796	chr3	+	46621301	46621448	True	NM_003212,NM_024512,NM_001174136	chr3,chr3,chr3	+,-,+	TDGF1,LRRC2,TDGF1	-2373,-13290,-5404
chr10:112399992-112401324	chr10	+	112400156	112401106	True	NR_026932,NM_001134363	chr10,chr10	-,+	LOC282997,RBM20	229606,3048
chr7:23646690-23647281	chr7	+	23646842	23647282	True	NM_138771,NR_002711	chr7,chr7	+,-	CCDC126,CLK2P	-9906,-20696
chr16:7384352-7384586	chr16	+	7384370	7384624	True	NM_001146336,NM_145891,NM_145892,NM_145893	chr16,chr16,chr16,chr16	-,+,+,+	TMEM114,RBFOX1,RBFOX1,RBFOX1	1237652,-1670,-1670,-1670
chr17:46893035-46893919	chr17	+	46893089	46893963	True	NM_005831,NM_001130918	chr17,chr17	+,-	CALCOCO2,TTLL6	14408,556
chr7:44163048-44163349	chr7	+	44163233	44163389	True	NM_001129,NM_006230,NM_001127218	chr7,chr7,chr7	+,-,-	AEBP1,POLD2,POLD2	-19324,-86,-86
chr6:2636364-2636615	chr6	+	2636427	2636625	True	NM_152554,NM_020135	chr6,chr6	-,+	C6orf195,WRNIP1	-1129,129040
chr14:74252439-74252759	chr14	+	74252447	74252757	True	NM_001146154,NM_001043318	chr14,chr14	+,-	PTGR2,C14orf43	65776,1189
chr9:136201363-136201917	chr9	+	136201469	136201781	True	NM_000972,NM_006753	chr9,chr9	+,-	RPL7A,SURF6	13287,1316
chr10:38383983-38384968	chr10	+	38384079	38384745	True	NM_003421,NM_001007094,NM_145011,NM_001178101	chr10,chr10,chr10,chr10	+,+,-,+	ZNF37A,ZNF37A,ZNF25,ZNF37A	-866,-866,-118626,-866
chr15:54319657-54320494	chr15	+	54319911	54320540	True	NM_182758,NM_001080534	chr15,chr15	-,+	WDR72,UNC13C	-268052,-14868
chr6:38548065-38548391	chr6	+	38548066	38548398	True	NM_001172418,NM_001371	chr6,chr6	-,+	BTBD9,DNAH8	15495,142153
chr11:62392762-62393488	chr11	+	62392899	62393470	True	NM_012200,NM_000327	chr11,chr11	-,+	B3GAT3,ROM1	-3451,-12737
chr3:11177783-11178669	chr3	+	11177800	11178614	True	NM_001098213,NR_027102	chr3,chr3	+,-	HRH1,LOC285370	164,-371923
chr16:57520553-57521519	chr16	+	57520724	57521496	True	NM_018110,NM_032940	chr16,chr16	-,+	DOK4,POLR2C	-339,-24225
chr14:73926306-73926536	chr14	+	73926309	73926551	True	NM_003744,NM_001005745,NM_001005744,NM_001005743,NM_024644	chr14,chr14,chr14,chr14,chr14	-,-,-,-,+	NUMB,NUMB,NUMB,NUMB,C14orf169	-1023,-1023,-1023,-1023,31092
chr12:69201475-69201839	chr12	+	69201532	69201734	True	NM_001005502,NM_002392	chr12,chr12	-,+	CPM,MDM2	125295,236
chr16:20494261-20494747	chr16	+	20494265	20494547	True	NM_174924,NM_001010845	chr16,chr16	-,+	PDILT,ACSM2A	-78232,-31465
chr16:20494261-20494747	chr16	-	20551927	20551983	False	NM_001105069,NM_001010845	chr16,chr16	-,+	ACSM2B,ACSM2A	35768,-89125
chr3:40637457-40638818	chr3	+	40637674	40638832	True	NR_033965,NM_198484	chr3,chr3	-,+	FLJ33065,ZNF621	-286485,-71349
chr22:29198776-29199374	chr22	+	29198842	29199258	True	NM_005080,NM_173510,NM_001079539	chr22,chr22,chr22	-,+,-	XBP1,CCDC117,XBP1	-2282,-30231,-2282
chr17:29247394-29248869	chr17	+	29247693	29248799	True	NM_024683,NM_018404	chr17,chr17	-,+	C17orf42,ADAP2	-14407,-46
chr22:41638515-41638901	chr22	+	41638801	41638867	True	NM_138481,NM_031488	chr22,chr22	-,+	CHADL,L3MBTL2	-1866,-37539
chr16:56899776-56901019	chr16	+	56900204	56900508	True	NM_000339,NM_001126108,NR_029680,NM_001126107,NM_005950	chr16,chr16,chr16,chr16,chr16	+,+,+,+,-	SLC12A3,SLC12A3,MIR138-2,SLC12A3,MT1G	-1137,-1137,-7826,-1137,-198227
chr11:67399843-67400202	chr11	+	67399978	67400158	True	NM_007103,NM_181843,NM_005995	chr11,chr11,chr11	+,-,-	NDUFV1,NUDT8,TBX10	-25706,-2577,6923
chr3:42005506-42007064	chr3	+	42005740	42007113	True	NM_001042646,NM_017886	chr3,chr3	+,-	TRAK1,ULK4	125632,-2080
chr5:149830795-149831525	chr5	+	149830933	149831288	True	NM_001025071,NM_001025070,NM_005617,NM_001543	chr5,chr5,chr5,chr5	-,-,-,+	RPS14,RPS14,RPS14,NDST1	-1614,-1614,-1614,56385
chr4:95128352-95128656	chr4	+	95128356	95128688	True	NM_001128429,NM_020159,NM_001128430,NM_014485	chr4,chr4,chr4,chr4	+,+,+,-	SMARCAD1,SMARCAD1,SMARCAD1,HPGDS	327,327,70,135389
chr1:95011888-95013637	chr1	+	95012361	95013659	True	NM_001178096,NM_001993,NM_002858	chr1,chr1,chr1	-,-,+	F3,F3,ABCD3	-4948,-4948,-128479
chr1:44171805-44172340	chr1	+	44171937	44172195	True	NM_174963,NM_174964,NM_174965,NM_174966,NM_174967,NM_174968,NM_174969,NM_174971,NM_174970,NR_033827,NM_006279	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,+,+,+,+,-,+	ST3GAL3,ST3GAL3,ST3GAL3,ST3GAL3,ST3GAL3,ST3GAL3,ST3GAL3,ST3GAL3,ST3GAL3,LOC100132774,ST3GAL3	1022,1022,1022,1022,1022,1022,1022,1022,1022,867,1022
chr19:30016493-30016908	chr19	+	30016612	30016704	True	NM_001031726,NM_001146339	chr19,chr19	-,+	C19orf12,VSTM2B	189309,786
chr12:54755312-54756465	chr12	+	54755591	54756467	True	NR_029894,NM_020370	chr12,chr12	+,-	MIR148B,GPR84	-24642,1853
chr15:67456575-67456989	chr15	+	67456756	67456952	True	NM_001145104,NM_024666	chr15,chr15	+,-	SMAD3,AAGAB	1540,90172
chr3:69134795-69135964	chr3	+	69134795	69135775	True	NM_006407,NM_003968,NM_198195	chr3,chr3,chr3	+,-,-	ARL6IP5,UBA3,UBA3	-756,-5271,-5271
chrX:41194882-41195751	chrX	+	41195051	41195686	True	NM_001193417,NM_001193416,NM_001356,NR_027761	chrX,chrX,chrX,chrX	+,+,+,-	DDX3X,DDX3X,DDX3X,LOC100132831	-2456,-2456,-2456,-502602
chr4:90830079-90830524	chr4	+	90830115	90830559	True	NM_001146055,NM_007351	chr4,chr4	-,+	SNCA,MMRN1	-70668,-14128
chr17:3462366-3463717	chr17	+	3462451	3463430	True	NM_145068,NM_001031681	chr17,chr17	-,+	TRPV3,CTNS	-1162,76331
chr13:50070716-50071060	chr13	+	50070742	50070914	True	NM_001079670,NM_001040444,NM_001040443	chr13,chr13,chr13	-,+,+	CAB39L,PHF11,PHF11	-52521,-265,-992
chr20:3661542-3661810	chr20	+	3661726	3661858	True	NM_153202,NM_001197327,NM_025220	chr20,chr20,chr20	-,+,-	ADAM33,HSPA12B,ADAM33	930,51458,930
chr2:162585007-162586476	chr2	+	162585348	162586514	True	NM_001935,NM_022058	chr2,chr2	-,+	DPP4,SLC4A10	344588,-104560
chr6:14883067-14883823	chr6	+	14883131	14883812	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	362714,779528
chr12:100673160-100674897	chr12	+	100673219	100674249	True	NM_017988,NM_152317	chr12,chr12	+,-	SCYL2,DEPDC4	-11728,-12362
chr19:40699740-40700522	chr19	+	40699789	40700521	True	NM_152479,NM_002446	chr19,chr19	-,+	TTC9B,MAP3K10	23835,-2202
chr1:154833589-154834014	chr1	+	154833735	154833999	True	NM_001826,NM_001204087,NM_002249,NM_170782	chr1,chr1,chr1,chr1	+,-,-,-	CKS1B,KCNN3,KCNN3,KCNN3	113118,8805,8805,-1397
chr16:14395226-14395580	chr16	+	14395258	14395628	True	NR_029854,NM_001134477,NR_030177	chr16,chr16,chr16	+,-,+	MIR365-1,PARN,MIR193B	7513,328542,2195
chr17:3501259-3501683	chr17	+	3501281	3501665	True	NM_080705,NM_080706,NM_018727,NM_001031681	chr17,chr17,chr17,chr17	-,-,-,+	TRPV1,TRPV1,TRPV1,CTNS	-2156,-5110,-945,38096
chr8:144100789-144101011	chr8	+	144100836	144100998	True	NM_002346,NM_001127213,NR_026913	chr8,chr8,chr8	+,+,-	LY6E,LY6E,LOC100133669	-985,-985,-1029
chr19:18750654-18752287	chr19	+	18750700	18752095	True	NM_004750,NM_018316	chr19,chr19	-,+	CRLF1,KLHL26	-33040,-2919
chr7:129096580-129096817	chr7	+	129096599	129096849	True	NM_020704,NR_029614	chr7,chr7	+,-	FAM40B,MIR182	-22376,313533
chr12:46376342-46376687	chr12	+	46376616	46376726	True	NM_152641,NM_004719	chr12,chr12	+,-	ARID2,SCAF11	-253054,7725
chr19:49979073-49979600	chr19	+	49979345	49979467	True	NM_001204502,NM_001204503,NM_001459,NM_017916	chr19,chr19,chr19,chr19	+,+,+,-	FLT3LG,FLT3LG,FLT3LG,PIH1D1	-1930,-1578,-1930,-24230
chr3:119311443-119311942	chr3	+	119311472	119311894	True	NM_005191,NM_015900	chr3,chr3	-,+	CD80,PLA1A	-32991,4827
chr3:111393902-111394941	chr3	+	111393979	111394976	True	NM_001185106,NM_024508,NM_153268	chr3,chr3,chr3	+,-,+	PLCXD2,ZBED2,PLCXD2	-507,-79813,-507
chr4:38665981-38666257	chr4	+	38666037	38666125	True	NM_016531,NR_026804	chr4,chr4	+,-	KLF3,FLJ13197	-298,174
chrX:129538635-129539275	chrX	+	129538724	129539048	True	NM_016024,NM_178471	chrX,chrX	+,-	RBMX2,GPR119	-2832,-19213
chr6:12514469-12514904	chr6	+	12514479	12514915	True	NM_030948,NM_032744	chr6,chr6	+,-	PHACTR1,C6orf105	202917,-735199
chr6:12514469-12514904	chr3	+	23959488	23959980	False	NM_002948,NM_020345	chr3,chr3	+,-	RPL15,NKIRAS1	-1308,-951
chr5:138088272-138088610	chr5	+	138088388	138088632	True	NM_015564,NM_001903	chr5,chr5	-,+	LRRTM2,CTNNA1	122475,474
chr6:86355981-86356786	chr6	+	86356229	86356648	True	NM_006372,NM_002526,NM_001159673,NM_001159675,NM_001159674,NM_001159677,NM_001159676	chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,+,-,-,-,-,-	SYNCRIP,NT5E,SYNCRIP,SYNCRIP,SYNCRIP,SYNCRIP,SYNCRIP	-3186,-196985,-3589,-5060,-3621,-3186,-5060
chr17:80187310-80187749	chr17	+	80187476	80187742	True	NM_001042423,NM_001042422,NM_004207,NM_198082	chr17,chr17,chr17,chr17	+,+,+,-	SLC16A3,SLC16A3,SLC16A3,CCDC57	2401,-1234,-638,-16787
chrX:54526381-54527271	chrX	+	54526541	54527230	True	NM_004463,NM_001184819	chrX,chrX	-,+	FGD1,GNL3L	-3942,29413
chr3:9460409-9460804	chr3	+	9460507	9460577	True	NR_027007,NM_001080517	chr3,chr3	-,+	LOC440944,SETD5	-21333,-21164
chr5:38557285-38557554	chr5	+	38557433	38557591	True	NM_001127671,NR_037423,NM_182801	chr5,chr5,chr5	-,-,+	LIFR,MIR3650,EGFLAM	-685,122,-111848
chr1:205199010-205199699	chr1	+	205199080	205199739	True	NM_014858,NM_199462	chr1,chr1	+,-	TMCC2,DSTYK	-2096,-18353
chr3:52020309-52021191	chr3	+	52020320	52021200	True	NM_000992,NM_001198898,NM_001198896,NM_000666,NM_001198895,NM_001198897	chr3,chr3,chr3,chr3,chr3,chr3	-,+,+,+,+,+	RPL29,ACY1,ACY1,ACY1,ACY1,ACY1	8808,-3071,-3071,-3071,-3071,-3071
chr8:59572421-59573887	chr8	+	59572511	59573797	True	NM_005625,NM_003580,NM_001144772	chr8,chr8,chr8	+,-,-	SDCBP,NSMAF,NSMAF	-106840,-107,-545
chr9:135903796-135904237	chr9	+	135903822	135904064	True	NM_001122823,NM_001162427,NM_012087	chr9,chr9,chr9	+,-,+	GTF3C5,TSC1,GTF3C5	1997,-83802,1997
chr9:113430806-113431790	chr9	+	113430827	113431627	True	NM_153366,NM_005592,NM_001166280,NM_001166281	chr9,chr9,chr9,chr9	-,+,+,+	SVEP1,MUSK,MUSK,MUSK	-88667,-51,-51,-51
chr17:7793219-7793468	chr17	+	7793242	7793422	True	NM_005852,NM_001005273,NR_024349,NM_001005271	chr17,chr17,chr17,chr17	+,+,-,+	CHD3,CHD3,LOC284023,CHD3	-1124,-1124,25893,-5170
chr10:14370220-14372026	chr10	+	14370281	14371965	True	NR_031668,NM_018027	chr10,chr10	+,-	MIR1265,FRMD4A	106609,951
chr17:49243442-49243651	chr17	+	49243527	49243613	True	NM_001198682,NM_002512,NM_003971,NM_001018137,NM_001018138,NM_001018139	chr17,chr17,chr17,chr17,chr17,chr17	+,+,-,+,+,+	NME2,NME2,SPAG9,NME2,NME2,NME2	19,19,-45301,-782,469,248
chr14:22043674-22045419	chr14	+	22043998	22045247	True	NM_001001912,NM_001005465	chr14,chr14	+,-	OR4E2,OR10G3	88049,-5123
chr7:141626473-141628326	chr7	+	141627192	141628343	True	NM_013252,NM_001001656	chr7,chr7	-,+	CLEC5A,OR9A4	18497,-8567
chr12:370812-372244	chr12	+	371156	372080	True	NM_016615,NM_001190997,NM_001130147,NR_034028	chr12,chr12,chr12,chr12	-,-,+,-	SLC6A13,SLC6A13,CCDC77,SLC6A13	9,9,126435,9
chr17:35970330-35972252	chr17	+	35970536	35971241	True	NM_007247,NM_007026,NM_198882,NM_001163546,NM_001163547,NM_001163544,NM_001163545,NM_080550	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,-,-,-,-,-,-	SYNRG,DUSP14,SYNRG,SYNRG,SYNRG,SYNRG,SYNRG,SYNRG	-1050,-120643,-1050,-1050,-1050,-1050,-1050,-1050
chr11:1715991-1716213	chr11	+	1716034	1716222	True	NR_026642,NM_001012416	chr11,chr11	-,+	FAM99B,KRTAP5-6	-9175,2202
chr14:21152977-21153921	chr14	+	21153058	21153860	True	NM_001097577,NM_002937,NM_001145,NM_194431,NM_001001968	chr14,chr14,chr14,chr14,chr14	+,+,+,+,-	ANG,RNASE4,ANG,RNASE4,OR6S1	3071,-737,-773,3071,-43208
chr19:35086851-35087193	chr19	+	35086881	35087143	True	NM_001025591,NM_001012320	chr19,chr19	-,+	SCGBL,ZNF302	-1391,81423
chr19:3365476-3366001	chr19	+	3365542	3365982	True	NM_005597,NM_001136503,NM_205843	chr19,chr19,chr19	+,-,+	NFIC,C19orf77,NFIC	590,114608,-5977
chr4:21949946-21950295	chr4	+	21950050	21950296	True	NM_001128432,NM_147182	chr4,chr4	+,-	GBA3,KCNIP4	744251,128
chr10:108924785-108925000	chr10	+	108924788	108925048	True	NM_001013031,NM_014978,NM_052918	chr10,chr10,chr10	-,+,-	SORCS1,SORCS3,SORCS1	-496,-2523980,-496
chr21:36094937-36095350	chr21	+	36095029	36095383	True	NM_004414,NR_024351	chr21,chr21	-,+	RCAN1,NCRNA00160	-107647,721
chr2:133426334-133426685	chr2	+	133426412	133426616	True	NM_001077427,NM_001508,NM_144586	chr2,chr2,chr2	-,+,-	LYPD1,GPR39,LYPD1	2504,-252316,1915
chr22:35566076-35567960	chr22	+	35566238	35567704	True	NM_001003681,NM_005368	chr22,chr22	+,-	HMGXB4,MB	85740,445730
chr6:33679671-33680363	chr6	+	33679709	33680061	True	NM_032340,NM_002224	chr6,chr6	-,+	C6orf125,ITPR3	-205,-90604
chr9:75772424-75773638	chr9	+	75772607	75773654	True	NM_000689,NM_000700	chr9,chr9	-,+	ALDH1A1,ANXA1	-204374,-5890
chr1:202169319-202170002	chr1	+	202169365	202169858	True	NR_037664,NM_021636,NM_001017403	chr1,chr1,chr1	-,+,+	PTPN7,LGR6,LGR6	-38649,3046,-6298
chr12:4913999-4915853	chr12	+	4914017	4915645	True	NM_006422,NM_002235	chr12,chr12	-,+	AKAP3,KCNA6	-159674,2696
chr10:118429950-118430168	chr10	+	118430006	118430164	True	NM_005396,NM_144661	chr10,chr10	+,-	PNLIPRP2,C10orf82	-49593,-525
chr19:20277049-20277276	chr19	+	20277137	20277243	True	NM_033196,NM_052852	chr19,chr19	-,+	ZNF682,ZNF486	-126860,839
chr11:67038412-67038666	chr11	+	67038525	67038619	True	NM_001619,NM_021173	chr11,chr11	+,-	ADRBK1,POLD4	-4671,82483
chr12:52218750-52219491	chr12	+	52218949	52219361	True	NM_001130015,NM_001013690	chr12,chr12	+,-	ANKRD33,FIGNL2	62431,6390
chrX:30256075-30257771	chrX	+	30256118	30257792	True	NM_000475,NM_002363,NM_002365,NM_002367,NM_177415,NM_177404	chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,+	NR0B1,MAGEB1,MAGEB3,MAGEB4,MAGEB1,MAGEB1	69753,4055,-7617,2264,4055,7478
chr11:62311817-62312541	chr11	+	62311896	62312568	True	NM_001620,NM_000327,NM_024060	chr11,chr11,chr11	-,+,-	AHNAK,ROM1,AHNAK	1814,67644,1814
chr1:53684831-53685372	chr1	+	53685049	53685409	True	NM_000098,NM_017887	chr1,chr1	+,-	CPT2,C1orf123	-23014,930
chr4:16082858-16083799	chr4	+	16083253	16083726	True	NM_001145849,NM_001145848,NM_001145847,NM_001145850,NM_001145851,NM_001145852,NM_006017,NR_027696	chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4	-,-,-,-,-,-,-,+	PROM1,PROM1,PROM1,PROM1,PROM1,PROM1,PROM1,FLJ39653	-5512,1947,1918,-5512,-5512,-5512,-5512,144559
chr17:79792070-79792288	chr17	+	79792258	79792318	True	NM_001007533,NM_000160,NM_001093767,NM_207368	chr17,chr17,chr17,chr17	-,+,-,-	DYSFIP1,GCGR,FAM195B,FAM195B	658,-30299,-1091,-1091
chr7:99817256-99817554	chr7	+	99817338	99817550	True	NM_024070,NM_152742	chr7,chr7	+,-	PVRIG,GPC2	-518,-42348
chr7:99817256-99817554	chr7	+	99949854	99950000	False	NM_178238,NR_003613	chr7,chr7	+,-	PILRB,PMS2P1	5625,-15924
chr9:101984916-101985626	chr9	+	101984921	101985583	True	NM_006808,NR_024532,NM_033087	chr9,chr9,chr9	+,-,-	SEC61B,ALG2,ALG2	-402,-675,-675
chr3:56840538-56841002	chr3	+	56840568	56840902	True	NM_019555,NR_024460	chr3,chr3	-,+	ARHGEF3,CCDC66	-4573,-249435
chr7:73585682-73586161	chr7	+	73586141	73586205	True	NM_002914,NM_031992,NM_022170	chr7,chr7,chr7	-,+,+	RFC2,EIF4H,EIF4H	82583,2500,2500
chr13:48669789-48671692	chr13	+	48670373	48671297	True	NM_018283,NM_014166	chr13,chr13	+,-	NUDT15,MED4	-58727,-1133
chr11:62421702-62422058	chr11	+	62421884	62422084	True	NM_001043229,NM_030628,NM_198335,NM_198334	chr11,chr11,chr11,chr11	+,-,-,-	METTL12,INTS5,GANAB,GANAB	10694,-1110,-7780,-7780
chr19:49537767-49538166	chr19	+	49537868	49538066	True	NR_004383,NM_033378,NM_033377,NR_024244,NM_033043	chr19,chr19,chr19,chr19,chr19	+,+,-,-,+	SNAR-G1,CGB2,CGB1,SNAR-G2,CGB5	2210,-2789,2181,-2824,9035
chr19:49537767-49538166	chr19	-	49530581	49530631	False	NR_004383,NM_000737,NM_033378,NM_033377,NR_024244	chr19,chr19,chr19,chr19,chr19	+,-,+,-,-	SNAR-G1,CGB,CGB2,CGB1,SNAR-G2	9645,-2988,4498,9610,4463
chr19:49537767-49538166	chr19	-	49549321	49549519	False	NR_004383,NM_033183,NM_033377,NM_033142,NM_033043	chr19,chr19,chr19,chr19,chr19	+,-,-,-,+	SNAR-G1,CGB8,CGB1,CGB7,CGB5	-9101,2899,-9130,9528,-2276
chr11:1784063-1784347	chr11	+	1784077	1784345	True	NM_001909,NM_001012416,NM_053005	chr11,chr11,chr11	-,+,-	CTSD,KRTAP5-6,MOB2	927,-65703,1206
chr3:149932061-149933107	chr3	+	149932145	149932797	True	NM_053024,NM_014779	chr3,chr3	-,+	PFN2,TSC22D2	-243404,193990
chr1:228784165-228784430	chr1	+	228784276	228784453	True	NR_002834,NM_033445,NR_037962	chr1,chr1,chr1	+,-,+	DUSP5P,HIST3H2A,RHOU	-3670,-138716,-3933
chr20:44465461-44467247	chr20	+	44465747	44467086	True	NM_003279,NM_033421,NM_001042632,NM_001042633,NM_152897	chr20,chr20,chr20,chr20,chr20	-,+,+,+,+	TNNC2,SNX21,SNX21,SNX21,SNX21	-9794,-3328,-3328,-3328,-3328
chr21:41119049-41120396	chr21	+	41119387	41120032	True	NR_026543,NM_001080444	chr21,chr21	-,+	C21orf88,IGSF5	-134638,-2105
chr1:171652051-171653369	chr1	+	171652547	171653277	True	NM_001007239,NM_000261	chr1,chr1	+,-	METTL13,MYOC	97483,-30774
chr2:198363532-198363768	chr2	+	198363588	198363764	True	NM_002157,NM_002156,NM_001202485,NM_199440	chr2,chr2,chr2,chr2	+,-,+,-	HSPE1,HSPD1,HSPE1-MOBKL3,HSPD1	956,926,956,1284
chr1:40598685-40599009	chr1	+	40598709	40599025	True	NM_001142604,NM_012421	chr1,chr1	-,+	PPT1,RLF	-35567,28015
chr3:181430259-181430463	chr3	+	181430357	181430479	True	NR_033725,NM_003106	chr3,chr3	-,+	DNAJC19,SOX2	-722795,-696
chr2:237172794-237174005	chr2	+	237172836	237174044	True	NM_020311,NM_212556	chr2,chr2	+,-	CXCR7,ASB18	304335,30
chr19:5785348-5785602	chr19	+	5785415	5785651	True	NM_020175,NM_001134316,NM_001161619,NM_004558	chr19,chr19,chr19,chr19	-,-,-,+	DUS3L,PRR22,DUS3L,NRTN	5648,-639,5648,38166
chr8:72226255-72227772	chr8	+	72226461	72227811	True	NM_172058,NR_033652	chr8,chr8	-,+	EYA1,LOC100132891	41218,527546
chr21:43443845-43444719	chr21	+	43443925	43444639	True	NR_027273,NM_020727	chr21,chr21	+,-	C21orf121,ZNF295	-1863,-13429
chr4:47485928-47487204	chr4	+	47485968	47487105	True	NM_020453,NM_017845	chr4,chr4	+,-	ATP10D,COMMD8	304,-20292
chr18:9134861-9135989	chr18	+	9134955	9135940	True	NM_001204056,NM_001083625,NM_001042388,NM_015208	chr18,chr18,chr18,chr18	+,+,-,+	ANKRD12,ANKRD12,PPP4R1,ANKRD12	1620,810,478710,810
chr15:99546012-99547320	chr15	+	99546038	99547251	True	NM_001102612,NM_001167902,NM_015286	chr15,chr15,chr15	-,-,+	PGPEP1L,PGPEP1L,SYNM	1691,3830,98034
chr11:70117772-70118348	chr11	+	70117786	70118318	True	NM_133266,NM_003626,NM_177423	chr11,chr11,chr11	-,+,+	SHANK2,PPFIA1,PPFIA1	389655,-1015,-1015
chr2:26469365-26470334	chr2	+	26469709	26470234	True	NM_000182,NM_000183	chr2,chr2	-,+	HADHA,HADHB	-2115,-2151
chr3:51895437-51896269	chr3	+	51895540	51896164	True	NM_001145059,NM_203424	chr3,chr3	-,+	IQCF5,IQCF2	13486,54
chr19:59066650-59067359	chr19	+	59066662	59066894	True	NM_198426,NR_027334,NM_003969,NM_014453	chr19,chr19,chr19,chr19	-,+,-,-	CHMP2A,LOC100131691,UBE2M,CHMP2A	-307,3658,3499,-176
chr11:65407040-65407960	chr11	+	65407054	65407994	True	NM_006747,NM_153253,NM_001145138	chr11,chr11,chr11	+,+,-	SIPA1,SIPA1,RELA	-1527,159,22499
chr6:4022317-4024061	chr6	+	4022418	4023737	True	NM_173563,NM_003913	chr6,chr6	-,+	C6orf146,PRPF4B	55770,-900
chr1:47014735-47015163	chr1	+	47014830	47015154	True	NM_001097611,NM_172225	chr1,chr1	-,+	KNCN,DMBX1	1783,-42213
chr3:111809021-111810209	chr3	+	111809079	111810193	True	NM_001171747,NM_024616,NM_001190259	chr3,chr3,chr3	+,+,-	C3orf52,C3orf52,GCET2	-3948,-3948,42009
chr12:133618128-133619173	chr12	+	133618183	133619037	True	NM_003428,NM_001164715,NM_001127372	chr12,chr12,chr12	+,-,+	ZNF84,ZNF605,ZNF84	-4368,-85291,-4266
chr2:64069058-64069293	chr2	+	64069062	64069245	True	NM_006759,NM_001001521,NM_001005739	chr2,chr2,chr2	+,+,-	UGP2,UGP2,VPS54	-99,-1015,177024
chr14:24772963-24773778	chr14	+	24772988	24773710	True	NM_001164692,NM_174913,NM_019839,NM_138452,NM_001136050,NM_001143919,NM_181657,NM_014430	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,-,-,+,+,-	LTB4R2,C14orf21,LTB4R2,DHRS1,DHRS1,LTB4R,LTB4R,CIDEB	5646,-3941,5646,-4322,-3949,6994,8602,6916
chr13:25540128-25540382	chr13	+	25540310	25540392	True	NR_026730,NM_030979	chr13,chr13	-,+	TPTE2P1,PABPC3	2265,129883
chr9:139267387-139268059	chr9	+	139267396	139267966	True	NM_052813,NM_001200003,NM_001080849,NM_052814	chr9,chr9,chr9,chr9	-,+,-,-	CARD9,GPSM1,DNLZ,CARD9	217,-18195,-9155,217
chr14:74226138-74226341	chr14	+	74226265	74226387	True	NM_194278,NM_001146154	chr14,chr14	-,+	C14orf43,PTGR2	664,92146
chr2:36584925-36585481	chr2	+	36584946	36585504	True	NR_037631,NM_016441	chr2,chr2	-,+	LOC100288911,CRIM1	-2233,-1627
chr18:3590775-3592349	chr18	+	3591083	3592367	True	NR_024101,NM_001003809	chr18,chr18	+,-	FLJ35776,DLGAP1	1744,252979
chr9:108458691-108460486	chr9	+	108458836	108460365	True	NM_018112,NM_005502	chr9,chr9	+,-	TMEM38B,ABCA1	-2063,-768309
chr3:112928776-112930436	chr3	+	112929349	112930434	True	NR_027796,NM_033254	chr3,chr3	-,+	C3orf17,BOC	-190794,940
chr19:9932222-9932967	chr19	+	9932427	9932861	True	NM_001048241,NM_024292,NM_017703	chr19,chr19,chr19	+,+,-	UBL5,UBL5,FBXL12	5706,5706,-2696
chr4:185940665-185940904	chr4	+	185940688	185940950	True	NM_001029887,NR_037510	chr4,chr4	+,-	HELT,MIR3945	-656,-168424
chr4:83935923-83936923	chr4	+	83936134	83936385	True	NM_194282,NM_001115008,NM_001115007,NM_016129	chr4,chr4,chr4,chr4	-,-,-,+	LIN54,LIN54,LIN54,COPS4	-4152,-4152,-2094,19853
chr2:38238202-38239008	chr2	+	38238207	38238947	True	NM_000104,NM_144713	chr2,chr2	-,+	CYP1B1,FAM82A1	64430,-60662
chr4:25541294-25541695	chr4	+	25541341	25541704	True	NM_015187,NM_001177998	chr4,chr4	-,+	SEL1L3,SLC34A2	322959,115730
chr5:14599519-14601194	chr5	+	14599958	14601233	True	NM_019018,NR_037899	chr5,chr5	+,-	FAM105A,LOC100128508	-18135,175958
chr2:26785319-26785550	chr2	+	26785382	26785536	True	NM_001105519,NM_194248	chr2,chr2	+,-	C2orf70,OTOF	42,-3816
chr12:4134365-4134961	chr12	+	4134503	4134799	True	NM_001759,NM_020367	chr12,chr12	+,-	CCND2,PARP11	248102,-151895
chrX:3632839-3633153	chrX	+	3632871	3633149	True	NM_005044,NM_004042	chrX,chrX	-,+	PRKX,ARSF	-1196,-648082
chr19:49619158-49619650	chr19	+	49619300	49619648	True	NM_022165,NM_003660,NM_018111	chr19,chr19,chr19	+,+,-	LIN7B,PPFIA3,C19orf73	-1737,3014,2799
chr6:6321050-6321691	chr6	+	6321213	6321528	True	NM_000129,NM_004271	chr6,chr6	-,+	F13A1,LY86	-289,267405
chr12:6694271-6694877	chr12	+	6694270	6694473	True	NR_003012,NM_002046	chr12,chr12	-,+	SCARNA11,GAPDH	-3495,-50665
chr19:52196214-52196485	chr19	+	52196311	52196527	True	NM_001523,NR_029843,NR_029693,NR_024330,NR_029482	chr19,chr19,chr19,chr19,chr19	-,+,+,+,+	HAS1,MIR99B,MIR125A,NCRNA00085,MIRLET7E	30744,-497,-21,65,-323
chrX:129404044-129404491	chrX	+	129404275	129404525	True	NM_017666,NM_003951	chrX,chrX	-,+	ZNF280C,SLC25A14	-1353,69521
chr3:121662035-121663435	chr3	+	121662187	121663271	True	NM_021082,NM_175924	chr3,chr3	+,-	SLC15A2,ILDR1	-49074,77906
chr3:47555167-47555442	chr3	+	47555171	47555491	True	NM_015466,NM_001031703	chr3,chr3	+,-	PTPN23,C3orf75	-132731,-20
chr12:53841436-53841804	chr12	+	53841481	53841727	True	NM_001128911,NM_001128912,NM_001128913,NM_001128914,NM_031989,NM_005016,NM_001005354,NM_001193511,NM_018457,NM_001098620	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,+,+,+,+,+,-,+,+	PCBP2,PCBP2,PCBP2,PCBP2,PCBP2,PCBP2,PRR13,MAP3K12,PRR13,PCBP2	4158,4158,4158,4158,4158,4158,-6106,51767,-6106,4158
chr22:41210375-41210914	chr22	+	41210376	41210738	True	NM_001204827,NM_006358	chr22,chr22	+,-	XPNPEP3,SLC25A17	42346,4704
chr19:10616146-10616899	chr19	+	10616328	10616752	True	NM_203500,NM_012289,NM_032885	chr19,chr19,chr19	-,-,+	KEAP1,KEAP1,ATG4D	-2274,-2847,37894
chr1:1983358-1983646	chr1	+	1983451	1983693	True	NM_002744,NM_001080484	chr1,chr1	+,-	PRKCZ,KIAA1751	-1593,-48175
chr5:54465864-54467063	chr5	+	54466004	54466585	True	NR_031572,NR_030387,NR_029960,NM_001170402,NM_152623,NM_001145734,NM_001008397	chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,-,-,+	MIR449C,MIR449B,MIR449A,CDC20B,CDC20B,CDC20B,GPX8	1646,35,-25,2470,2470,2470,-10077
chr17:45726139-45726802	chr17	+	45726158	45726670	True	NM_002265,NR_033934	chr17,chr17	+,-	KPNB1,MRPL45P2	604,-156172
chr22:24128773-24129110	chr22	+	24128890	24129058	True	NM_213720,NM_003073,NM_001007468	chr22,chr22,chr22	-,+,+	CHCHD10,SMARCB1,SMARCB1	-18749,91,91
chr9:140514032-140514370	chr9	+	140514080	140514406	True	NM_024757,NM_001145527	chr9,chr9	+,+	EHMT1,EHMT1	-687,-687
chr19:54823365-54824099	chr19	+	54823403	54823983	True	NM_021250,NM_181879,NM_181986,NM_001005367,NM_181985	chr19,chr19,chr19,chr19,chr19	-,-,-,+,-	LILRA5,LILRA5,LILRA5,TTYH1,LILRA5	476,435,435,102621,435
chr9:139923067-139923405	chr9	+	139923109	139923391	True	NM_004479,NM_001606,NM_212533,NM_207511	chr9,chr9,chr9,chr9	-,-,-,+	FUT7,ABCA2,ABCA2,C9orf139	3951,-369,33,-1244
chr20:3993507-3994217	chr20	+	3993575	3994094	True	NM_001134337,NR_029519,NM_001134338,NM_007219	chr20,chr20,chr20,chr20	-,+,-,-	RNF24,MIR103-2,RNF24,RNF24	2179,-95495,2179,2017
chrX:150563447-150564936	chrX	+	150564017	150564920	True	NM_001017980,NM_134446	chrX,chrX	+,-	VMA21,CD99L2	736,-496728
chr5:92604105-92605854	chr5	+	92604164	92605900	True	NR_015369,NM_005654	chr5,chr5	-,+	FLJ42709,NR2F1	300649,313142
chr9:93576211-93577171	chr9	+	93576276	93577201	True	NM_001174168,NM_017594,NM_001174167	chr9,chr9,chr9	+,-,+	SYK,DIRAS2,SYK	-12121,-171168,12503
chr15:60294488-60295531	chr15	+	60294508	60295451	True	NM_012182,NM_004330	chr15,chr15	+,-	FOXB1,BNIP2	969,-312866
chr3:119373894-119374722	chr3	+	119374288	119374752	True	NM_033364,NM_022135	chr3,chr3	+,-	C3orf15,POPDC2	47116,4702
chr3:18467249-18467491	chr3	+	18467390	18467472	True	NM_002971,NM_144633,NM_001195470	chr3,chr3,chr3	-,+,-	SATB1,KCNH8,SATB1	-561,722544,-561
chr21:16130111-16130958	chr21	+	16130247	16131004	True	NR_003087,NM_022136	chr21,chr21	+,-	ABCC13,SAMSN1	-484179,-211583
chr1:15803444-15804897	chr1	+	15803618	15804516	True	NM_015849,NM_001229	chr1,chr1	+,-	CELA2B,CASP9	-1085,46474
chr6:52772845-52774453	chr6	+	52772893	52774471	True	NM_000847,NM_033481	chr6,chr6	-,+	GSTA3,FBXO9	75,155324
chr8:42698241-42698571	chr8	+	42698284	42698564	True	NM_199003,NM_018105,NM_032410	chr8,chr8,chr8	-,-,+	THAP1,THAP1,HOOK3	-40,-40,53468
chr22:45609366-45609980	chr22	+	45609377	45609580	True	NM_015264,NM_153645	chr22,chr22	-,+	KIAA0930,NUP50	-1030,-48876
chr6:159072542-159073083	chr6	+	159072665	159072910	True	NM_006519,NM_001009991	chr6,chr6	-,+	DYNLT1,SYTL3	-6861,-1682
chr1:20958919-20959810	chr1	+	20959070	20959786	True	NM_005216,NM_032409	chr1,chr1	-,+	DDOST,PINK1	28301,161
chr11:130785252-130785753	chr11	+	130785378	130785794	True	NM_001048209,NM_014758	chr11,chr11	+,-	NTM,SNX19	454576,638
chr7:30026633-30027386	chr7	+	30026637	30027355	True	NM_001197026,NM_001145513,NM_001145515,NM_014766,NM_001145514	chr7,chr7,chr7,chr7,chr7	+,-,-,-,-	PLEKHA8,SCRN1,SCRN1,SCRN1,SCRN1	40621,2429,2120,2120,2600
chr11:9686727-9688292	chr11	+	9686787	9688126	True	NR_033972,NM_015055	chr11,chr11	-,+	LOC440028,SWAP70	93011,-1217
chr9:103348607-103349893	chr9	+	103348762	103349712	True	NM_017746,NM_001018116	chr9,chr9	-,+	TEX10,MURC	-233503,-8490
chr1:15479654-15480029	chr1	+	15479760	15479836	True	NM_018022,NM_001136217,NM_001136218,NM_001136216,NR_027136	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	TMEM51,TMEM51,TMEM51,TMEM51,C1orf126	392,-783,392,-783,-800
chr1:156719541-156719800	chr1	+	156719713	156719839	True	NM_001126051,NM_145729,NM_005973,NM_004494,NM_001126050,NM_024540	chr1,chr1,chr1,chr1,chr1,chr1	-,-,+,-,-,-	HDGF,MRPL24,PRCC,HDGF,HDGF,MRPL24	2235,-8790,17434,1754,2451,-8790
chr1:117574627-117575511	chr1	+	117574683	117575545	True	NM_003594,NM_001145635	chr1,chr1	+,-	TTF2,TRIM45	27403,88916
chr5:180685313-180687154	chr5	+	180685479	180686781	True	NM_201627	chr5	+	TRIM41	-35230
chr4:128704564-128705291	chr4	+	128704577	128705303	True	NM_014278,NM_152778	chr4,chr4	+,-	HSPA4L,MFSD8	-1183,181886
chr1:77654478-77655792	chr1	+	77654594	77655803	True	NM_174858,NM_005482	chr1,chr1	+,-	AK5,PIGK	91858,29388
chr2:218994698-218994997	chr2	+	218994705	218994872	True	NM_000634,NM_001557,NM_001168298	chr2,chr2,chr2	-,+,+	CXCR1,CXCR2,CXCR2	36901,-4020,-4743
chr15:69707289-69708347	chr15	+	69707377	69708257	True	NM_138555,NM_004856,NM_006305	chr15,chr15,chr15	+,+,-	KIF23,KIF23,ANP32A	-740,-740,-594116
chr2:73052917-73054075	chr2	+	73052950	73053750	True	NM_015189,NM_003124	chr2,chr2	-,+	EXOC6B,SPR	-11,60761
chr4:1244935-1245372	chr4	+	1245031	1245365	True	NM_001012614,NR_033339,NM_001328	chr4,chr4,chr4	-,+,-	CTBP1,C4orf42,CTBP1	-2123,-1854,-2123
chr1:151824770-151826471	chr1	+	151824839	151826487	True	NR_024237,NM_182578	chr1,chr1	+,-	LOC100132111,THEM5	-13945,-94
chr7:57200990-57202540	chr7	+	57201179	57202290	True	NM_033273,NR_036102	chr7,chr7	-,+	ZNF479,MIR3147	5331,270440
chr17:58038146-58039028	chr17	+	58038762	58038943	True	NM_003161,NM_016125	chr17,chr17	+,-	RPS6KB1,RNFT1	-68379,3227
chr17:3625747-3626874	chr17	+	3625877	3626782	True	NM_175080,NM_031965	chr17,chr17	-,+	P2RX5,GSG2	-26179,414
chr1:209768874-209769389	chr1	+	209768910	209769428	True	NM_020439,NR_036213	chr1,chr1	+,-	CAMK1G,MIR4260	-11916,27477
chr19:37723263-37724326	chr19	+	37723281	37723969	True	NM_152279,NM_152604	chr19,chr19	-,+	ZNF585B,ZNF383	-21830,-5974
chr8:6264430-6264667	chr8	+	6264613	6264711	True	NM_001172575,NM_001172574,NM_001118887,NM_024596	chr8,chr8,chr8,chr8	+,+,-,+	MCPH1,MCPH1,ANGPT2,MCPH1	-551,-551,156123,-551
chr3:42200373-42200887	chr3	+	42200556	42200824	True	NM_014965,NM_001174138	chr3,chr3	+,-	TRAK1,CCK	836,104665
chr22:28195434-28195717	chr22	+	28195518	28195714	True	NM_002430,NR_026962	chr22,chr22	-,+	MN1,TTC28-AS1	1822,119649
chr6:82639870-82641203	chr6	+	82639979	82641103	True	NM_006670,NM_017633	chr6,chr6	+,-	TPBG,FAM46A	431819,-177551
chr19:35598701-35598919	chr19	+	35598715	35598934	True	NM_001136012,NM_001136010,NM_001136011,NM_021910,NR_024562,NR_024561,NM_001136009,NM_001136008,NM_001136007,NM_005971	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,-,-,+,+,+,+	FXYD3,FXYD3,FXYD3,FXYD3,LOC100128675,LOC100128675,FXYD3,FXYD3,FXYD3,FXYD3	7797,7797,7797,7797,-1507,-1540,7797,7797,7797,7797
chr6:155772406-155773055	chr6	+	155772438	155772622	True	NM_015718,NM_001001346	chr6,chr6	-,+	NOX3,CLDN20	4467,-187344
chr13:20533833-20534431	chr13	+	20533967	20534430	True	NM_001039650,NM_197968,NM_003453,NM_001190964,NM_001190965	chr13,chr13,chr13,chr13,chr13	-,+,+,+,+	ZMYM5,ZMYM2,ZMYM2,ZMYM2,ZMYM2	-96191,-1208,-1208,-1170,-1044
chr6:52252899-52254644	chr6	+	52253583	52254501	True	NM_133367,NM_002388	chr6,chr6	+,-	PAQR8,MCM3	-26709,-104001
chr22:21639069-21640184	chr22	+	21639209	21640219	True	NR_003700,NR_024583	chr22,chr22	-,+	PI4KAP2,POM121L8P	231611,-2546
chr22:21639069-21640184	chr22	+	18837307	18837362	False	NM_005675,NR_003267	chr22,chr22	+,-	DGCR6,GGT3P	56373,-57833
chr22:21639069-21640184	chr22	-	21478873	21479063	False	NR_037566,NR_002829	chr22,chr22	+,-	BCRP2,P2RX6P	-21619,-80335
chr17:34206561-34207452	chr17	+	34206892	34207486	True	NM_002985,NM_003487	chr17,chr17	-,+	CCL5,TAF15	-51,-70457
chr22:27283539-27285290	chr22	+	27283624	27285111	True	NR_033321,NM_001887	chr22,chr22	+,-	MIAT,CRYBB1	-230236,-269633
chr3:109138960-109140258	chr3	+	109139005	109139821	True	NM_018189,NM_001145553	chr3,chr3	-,+	DPPA4,FLJ25363	-82586,-10230
chr15:74610711-74611961	chr15	+	74610717	74611959	True	NM_001099773,NM_182791	chr15,chr15	-,+	CYP11A1,CCDC33	46644,132
chr6:58182366-58182974	chr6	+	58182389	58183008	True	NM_000947,NR_003660	chr6,chr6	+,-	PRIM2,GUSBP4	-1000018,104766
chr6:58182366-58182974	chr6	-	26687536	26687678	False	NM_013375,NM_024639	chr6,chr6	+,-	ABT1,ZNF322A	-90411,-27573
chr19:17413403-17413833	chr19	+	17413410	17413774	True	NM_024050,NM_024527,NM_023937	chr19,chr19,chr19	+,-,+	DDA1,ABHD8,MRPL34	6562,558,2702
chr7:155755882-155756718	chr7	+	155755929	155756719	True	NM_000193,NM_053043	chr7,chr7	-,+	SHH,RBM33	-150962,-318777
chr12:53571513-53571972	chr12	+	53571843	53571930	True	NM_001004304,NM_015989	chr12,chr12	+,-	ZNF740,CSAD	2604,2557
chr19:14491016-14491945	chr19	+	14491235	14491885	True	NM_078481,NM_001025160,NM_001204057,NM_001784	chr19,chr19,chr19,chr19	+,+,-,+	CD97,CD97,DDX39A,CD97	327,327,38071,327
chr10:129687742-129688085	chr10	+	129687957	129688087	True	NM_006504,NM_152311	chr10,chr10	+,-	PTPRE,CLRN3	17237,3174
chr1:1245376-1246666	chr1	+	1245473	1246503	True	NM_030649,NM_153339	chr1,chr1	-,+	ACAP3,PUSL1	-2204,-1530
chr19:50466351-50467450	chr19	+	50466774	50467124	True	NM_001135163,NM_052884,NR_002825	chr19,chr19,chr19	-,-,+	SIGLEC11,SIGLEC11,SIGLEC16	-2345,-2345,5787
chr15:35820265-35821263	chr15	+	35820468	35821308	True	NM_080650,NR_003144	chr15,chr15	-,+	ATPBD4,LOC723972	17154,-291009
chr8:86840898-86842826	chr8	+	86840922	86842862	True	NR_003594	chr8	-	REXO1L2P	-751
chr1:169791934-169792246	chr1	+	169791933	169792024	True	NM_018186,NM_033418	chr1,chr1	+,-	C1orf112,METTL18	-27441,-27902
chr14:94463366-94464805	chr14	+	94463373	94464423	True	NR_024183,NR_024182,NM_001202429,NR_024184	chr14,chr14,chr14,chr14	+,+,-,+	C14orf48,C14orf48,ASB2,C14orf48	38,12,-20297,38
chr1:11753755-11754145	chr1	+	11753861	11754143	True	NM_198545,NM_001127325	chr1,chr1	+,-	C1orf187,MAD2L2	-2131,-2183
chr2:85813914-85815006	chr2	+	85814283	85815050	True	NM_003761,NM_016494,NM_001031738,NM_006634	chr2,chr2,chr2,chr2	+,+,-,+	VAMP8,RNF181,TMEM150A,VAMP5	-9732,7786,14822,-2815
chr1:48309933-48310347	chr1	+	48310097	48310379	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	152233,377977
chr13:54887367-54887823	chr13	+	54887366	54887711	True	NR_031628,NM_006418	chr13,chr13	-,+	MIR1297,OLFM4	-1183,-1284541
chr17:18527218-18527519	chr17	+	18527391	18527505	True	NR_036647,NM_001037330	chr17,chr17	-,+	CCDC144B,TRIM16L	1475,97896
chr22:39471645-39472686	chr22	+	39471706	39472698	True	NM_021822,NM_175709	chr22,chr22	+,-	APOBEC3G,CBX7	311,75890
chr1:182028116-182029893	chr1	+	182028487	182029893	True	NR_034131,NM_001009992	chr1,chr1	+,-	NCRNA00272,ZNF648	346862,1004
chr1:87795120-87796245	chr1	+	87795125	87796267	True	NM_006769,NM_203341	chr1,chr1	+,-	LMO4,SEP15	-1025,-415018
chr1:160173839-160175116	chr1	+	160173934	160174968	True	NM_003768,NR_028106	chr1,chr1	+,-	PEA15,DCAF8	156,57360
chr4:141185365-141186487	chr4	+	141185598	141186427	True	NM_032547,NR_033939	chr4,chr4	+,-	SCOC,LOC100129858	-7216,108170
chr1:244596056-244597084	chr1	+	244596214	244596887	True	NM_001126,NM_001130957	chr1,chr1	-,+	ADSS,C1orf101	18600,27785
chr3:178979298-178980079	chr3	+	178979445	178979976	True	NM_171828,NM_171829,NM_171830,NM_001163677,NR_028135,NM_016331	chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,-,+	KCNMB3,KCNMB3,KCNMB3,KCNMB3,KCNMB3,ZNF639	4916,-1766,-9800,4916,-1766,61574
chr2:64881821-64882531	chr2	+	64881890	64882535	True	NM_014755,NR_034023	chr2,chr2	-,+	SERTAD2,LOC339807	-844,-47500
chr13:73672028-73672942	chr13	+	73672260	73672730	True	NM_001730,NM_014953	chr13,chr13	+,-	KLF5,DIS3	-39180,-315916
chr17:41147918-41148460	chr17	+	41148308	41148458	True	NM_000988,NM_001142654	chr17,chr17	+,-	RPL27,AARSD1	1987,-15763
chr16:768114-768418	chr16	+	768170	768264	True	NM_001031737,NM_023933,NM_032304,NM_024042	chr16,chr16,chr16,chr16	-,+,+,+	CCDC78,FAM173A,HAGHL,METRN	8259,2893,9001,-3048
chr8:121823480-121823814	chr8	+	121823522	121823804	True	NM_021021,NM_022045	chr8,chr8	-,+	SNTB1,MTBP	555,-365907
chr15:52264122-52264426	chr15	+	52264240	52264330	True	NM_138792,NM_002748	chr15,chr15	-,+	LEO1,MAPK6	-282,47080
chr9:66494420-66496033	chr9	+	66494873	66495755	True	NR_024443,NR_024496	chr9,chr9	-,+	LOC100133920,LOC442421	535277,-656
chr9:66494420-66496033	chr9	+	45357697	45357748	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-367513,-1726967
chr9:66494420-66496033	chr9	-	68376722	68376773	False	NR_033907,NR_034006	chr9,chr9	-,+	LOC642236,LOC100132352	77653,349767
chr1:228133234-228134089	chr1	+	228133251	228133973	True	NM_033131,NM_003395	chr1,chr1	+,-	WNT3A,WNT9A	60749,1753
chr12:23711830-23712726	chr12	+	23711837	23712614	True	NR_030625,NM_178010	chr12,chr12	+,-	MIR920,SOX5	652740,24946
chr6:36099718-36100544	chr6	+	36099723	36100479	True	NM_002754,NM_052961	chr6,chr6	+,-	MAPK13,SLC26A8	-1512,-107310
chr3:47324914-47325160	chr3	+	47324923	47325067	True	NM_022342,NM_182902,NM_001134878,NM_025010	chr3,chr3,chr3,chr3	-,-,-,+	KIF9,KIF9,KIF9,KLHL18	-586,-586,-586,-644
chr2:102610673-102611272	chr2	+	102610727	102611287	True	NM_173343,NM_004633,NM_001145664	chr2,chr2,chr2	+,+,-	IL1R2,IL1R2,RFX8	4171,-2472,-519562
chr20:25234142-25234416	chr20	+	25234285	25234426	True	NR_027091,NM_002862	chr20,chr20	-,+	LOC284798,PYGB	-104859,-5634
chr5:132388296-132388552	chr5	+	132388332	132388538	True	NM_017665,NM_002154	chr5,chr5	-,+	ZCCHC10,HSPA4	-26092,-721
chrX:133680635-133681243	chrX	+	133680671	133681289	True	NR_029962,NR_029946,NR_024607,NR_030399,NM_000194,NR_030227,NR_030587,NR_030228	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,+,-,-,-	MIR450A1,MIR424,MGC16121,MIR542,HPRT1,MIR450A2,MIR450B,MIR503	-6210,70,-11,-5204,-86554,-6034,-6379,-243
chr22:27042627-27043221	chr22	+	27042742	27043194	True	NR_003491,NM_001887	chr22,chr22	+,-	MIAT,CRYBB1	10251,-28751
chr12:108156017-108157161	chr12	+	108156019	108156899	True	NM_012406,NM_203436	chr12,chr12	-,+	PRDM4,ASCL4	-1105,11262
chrX:9752479-9753201	chrX	+	9752727	9753119	True	NM_000273,NM_001649	chrX,chrX	-,+	GPR143,SHROOM2	-18722,1376
chr18:14946286-14947950	chr18	+	14946616	14947878	True	NR_027417,NR_036153	chr18,chr18	-,+	LOC644669,MIR3156-2	378090,-116503
chr10:104679615-104679959	chr10	+	104679639	104680003	True	NM_199077,NM_017649,NM_000102,NM_199076	chr10,chr10,chr10,chr10	+,+,-,+	CNNM2,CNNM2,CYP17A1,CNNM2	-1576,-1576,-82349,-1576
chr4:148443064-148443612	chr4	+	148443124	148443327	True	NR_028596,NM_138364	chr4,chr4	+,-	EDNRA,PRMT10	-41114,162014
chr16:30762584-30763268	chr16	+	30762701	30763137	True	NM_001172432,NM_000294,NM_001014979	chr16,chr16,chr16	+,+,-	PHKG2,PHKG2,C16orf93	-3132,-3132,10478
chr8:37550273-37552015	chr8	+	37550331	37551878	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	1422,53737
chr11:44119701-44120099	chr11	+	44119708	44119920	True	NM_021926,NM_001178083,NM_207122,NM_000401	chr11,chr11,chr11,chr11	-,+,+,+	ALX4,EXT2,EXT2,EXT2	211846,-2661,-2661,-2013
chr12:110940085-110940408	chr12	+	110940220	110940452	True	NM_016226,NM_152442,NM_057180	chr12,chr12,chr12	-,+,-	VPS29,RAD9B,VPS29	-304,-270,-304
chr2:202132993-202134378	chr2	+	202133407	202134409	True	NM_001127391,NM_033356	chr2,chr2	-,+	ALS2CR12,CASP8	87742,-8238
chr5:68387031-68388005	chr5	+	68387218	68387828	True	NM_176816,NM_022902,NM_024055	chr5,chr5,chr5	-,+,+	CCDC125,SLC30A5,SLC30A5	228632,2053,1989
chr2:210639298-210639909	chr2	+	210639297	210639945	True	NM_152519,NM_032504,NM_182587	chr2,chr2,chr2	-,+,+	C2orf67,UNC80,UNC80	396156,-2645,-2645
chr1:172628698-172630433	chr1	+	172628910	172630475	True	NM_153747,NM_000639	chr1,chr1	-,+	PIGC,FASLG	-215680,-783
chr12:128049974-128050215	chr12	+	128049988	128050221	True	NR_033970,NR_033987	chr12,chr12	-,+	LOC440117,FLJ37505	-690752,315940
chr3:45982113-45982571	chr3	+	45982125	45982513	True	NM_024513,NM_006564	chr3,chr3	-,+	FYCO1,CXCR6	54846,2459
chrX:133681565-133683042	chrX	+	133681565	133683063	True	NR_029962,NR_029946,NR_024607,NR_030399,NM_000194,NR_030227,NR_030587,NR_030228	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,+,-,-,-	MIR450A1,MIR424,MGC16121,MIR542,HPRT1,MIR450A2,MIR450B,MIR503	-7104,-824,-905,-6098,-87447,-6928,-7273,-1137
chr4:139706775-139707088	chr4	+	139707054	139707114	True	NM_006874,NM_012118	chr4,chr4	-,+	ELF2,CCRN4L	298583,229828
chr14:24423539-24423796	chr14	+	24423560	24423781	True	NR_023924,NR_023922,NR_023923,NM_021004,NR_023921	chr14,chr14,chr14,chr14,chr14	-,-,-,+,-	C14orf167,C14orf167,C14orf167,DHRS4,C14orf167	-168,576,-168,-647,-168
chr16:67227244-67228319	chr16	+	67227283	67228125	True	NM_024712,NM_001950,NM_178516,NR_029887,NM_001040715	chr16,chr16,chr16,chr16,chr16	+,+,-,-,-	ELMO3,E2F4,EXOC3L1,MIR328,KIAA0895L	4902,-1267,-3176,8223,-9400
chr16:28931145-28932478	chr16	+	28931338	28932527	True	NM_024816,NM_001178098	chr16,chr16	-,+	RABEP2,CD19	4055,10732
chr3:169528572-169529887	chr3	+	169528875	169529763	True	NM_001080460,NM_001172779,NM_153353,NM_001172780	chr3,chr3,chr3,chr3	+,-,-,-	LRRIQ4,LRRC34,LRRC34,LRRC34	9946,861,861,861
chr14:51276871-51277748	chr14	+	51276966	51277320	True	NM_181533,NM_020921	chr14,chr14	+,-	ABHD12B,NIN	61557,20579
chr1:78367258-78369113	chr1	+	78367261	78369129	True	NM_003902,NM_144573	chr1,chr1	-,+	FUBP1,NEXN	75706,-13112
chr17:18966017-18966530	chr17	+	18966237	18966557	True	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	64224,-15901
chr17:18966017-18966530	chr17	-	19014778	19014954	False	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	15827,-64442
chr17:18966017-18966530	chr17	+	19092338	19092658	False	NM_006613,NM_001102664	chr17,chr17	-,+	GRAP,EPN2	-142002,48031
chr2:36822910-36823721	chr2	+	36822940	36823596	True	NM_001177972,NM_005102,NM_001042548	chr2,chr2,chr2	+,-,-	VIT,FEZ2,FEZ2	100236,1786,1786
chr9:90499778-90500066	chr9	+	90499802	90500080	True	NM_001039803,NM_178828	chr9,chr9	-,+	CDK20,C9orf79	89665,-2081
chr7:561994-562207	chr7	+	562080	562192	True	NM_002607,NR_033963,NM_033023	chr7,chr7,chr7	-,+,-	PDGFA,FLJ44511,PDGFA	-2599,-2103,-2599
chr17:43045970-43046348	chr17	+	43046011	43046349	True	NM_213607,NM_006688	chr17,chr17	+,-	CCDC103,C1QL1	-68908,-367
chr19:1021161-1021668	chr19	+	1021317	1021669	True	NM_004368,NM_033420,NM_001033026,NM_201277	chr19,chr19,chr19,chr19	+,-,-,+	CNN2,C19orf6,C19orf6,CNN2	4628,-176,-176,4628
chr4:184017623-184018471	chr4	+	184017769	184018516	True	NR_024008,NM_024949	chr4,chr4	-,+	C4orf38,WWC2	1886,1946
chr5:178283039-178283859	chr5	+	178283218	178283602	True	NR_024035,NM_058230	chr5,chr5	-,+	AACSP1,ZNF354B	-79941,3351
chr11:94309027-94309805	chr11	+	94309027	94309773	True	NM_005591,NM_152431	chr11,chr11	-,+	MRE11A,PIWIL4	-81987,-8615
chr8:22100284-22101196	chr8	+	22100283	22101212	True	NM_001722,NR_029714	chr8,chr8	+,-	POLR3D,MIR320A	1406,1394
chr8:37478408-37480388	chr8	+	37478430	37480244	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	73056,125370
chr10:88776330-88777851	chr10	+	88776625	88777803	True	NM_024756,NM_001146157	chr10,chr10	-,+	MMRN2,FAM25A	-59200,2242
chr10:88776330-88777851	chr10	-	75426921	75426977	False	NM_004922,NM_001114133	chr10,chr10	+,-	SEC24C,SYNPO2L	77153,-11089
chr3:119299227-119300073	chr3	+	119299237	119299724	True	NM_005191,NM_001125	chr3,chr3	-,+	CD80,ADPRH	-20756,-765
chr1:154598884-154599665	chr1	+	154598888	154599662	True	NM_000748,NM_001025107	chr1,chr1	+,-	CHRNB2,ADAR	-58694,844
chr19:7984201-7984567	chr19	+	7984554	7984616	True	NM_206833,NM_001195259,NM_003083,NR_030717	chr19,chr19,chr19,chr19	-,+,+,+	CTXN1,LOC645781,SNAPC2,SNAPC2	6485,-3573,577,1250
chr1:206641641-206642343	chr1	+	206641731	206642173	True	NM_001193321,NM_001193322,NM_014002,NM_001201478	chr1,chr1,chr1,chr1	+,+,+,-	IKBKE,IKBKE,IKBKE,EIF2D	1412,1412,1412,143781
chr21:45080410-45081320	chr21	+	45080548	45081357	True	NM_015056,NM_007031	chr21,chr21	+,-	RRP1B,HSF2BP	-1167,-1174
chr3:127393458-127393679	chr3	+	127393519	127393677	True	NR_033428,NR_033429,NM_172027,NM_001142646	chr3,chr3,chr3,chr3	+,+,+,-	ABTB1,ABTB1,ABTB1,TPRA1	-1790,-1790,-1790,-83951
chr9:139294875-139295159	chr9	+	139294882	139295134	True	NM_003086,NM_006643,NM_015160,NM_001039707,NM_001039708	chr9,chr9,chr9,chr9,chr9	-,-,+,-,-	SNAPC4,SDCCAG3,PMPCA,SDCCAG3,SDCCAG3	-1993,9970,9981,9970,9970
chr12:24716757-24717160	chr12	+	24716926	24717176	True	NR_030625,NM_152989	chr12,chr12	+,-	MIR920,SOX5	-351623,-1546
chr21:36094069-36094581	chr21	+	36094257	36094629	True	NM_004414,NR_024351	chr21,chr21	-,+	RCAN1,NCRNA00160	-106875,1475
chr11:47235029-47235998	chr11	+	47235412	47235984	True	NM_000107,NM_016223	chr11,chr11	+,-	DDB2,PACSIN3	508,-27402
chr12:48164805-48165434	chr12	+	48164829	48165426	True	NM_001098531,NM_017842	chr12,chr12	-,+	RAPGEF3,SLC48A1	-11940,1540
chr6:41127603-41128038	chr6	+	41127716	41127989	True	NM_018965,NR_026938,NM_178174	chr6,chr6,chr6	-,+,-	TREM2,LOC221442,TREML1	2994,-58994,-5646
chr19:36428719-36430503	chr19	+	36428889	36430217	True	NR_033390,NM_024509	chr19,chr19	-,+	TYROBP,LRFN3	-29678,-918
chr1:153432478-153432764	chr1	+	153432560	153432628	True	NM_002963,NM_176823	chr1,chr1	-,+	S100A7,S100A7A	559,-43611
chr12:9067553-9067831	chr12	+	9067562	9067852	True	NM_004426,NM_002355	chr12,chr12	+,-	PHC1,M6PR	-297,34450
chr6:41699668-41701119	chr6	+	41700017	41701067	True	NM_001167827,NM_007162,NM_013397	chr6,chr6,chr6	-,-,+	TFEB,TFEB,PRICKLE4	2980,1781,47432
chr11:62427244-62428083	chr11	+	62427747	62427905	True	NR_004390,NM_030628,NM_001043229	chr11,chr11,chr11	+,-,+	SNORA57,INTS5,METTL12	4988,-6973,4873
chrX:46404305-46404589	chrX	+	46404329	46404630	True	NM_001039891,NM_001146291,NR_015378,NM_001190417	chrX,chrX,chrX,chrX	-,-,+,-	ZNF674,ZNF674,LOC401588,ZNF674	312,312,297,312
chr13:108518538-108518740	chr13	+	108518562	108518788	True	NM_032859,NM_001080396	chr13,chr13	+,-	ABHD13,FAM155A	351974,722
chr10:123747380-123747925	chr10	+	123747447	123747772	True	NM_017615,NM_206861,NM_206862	chr10,chr10,chr10	-,+,+	NSMCE4A,TACC2,TACC2	-12704,916,916
chr3:75828594-75828872	chr3	+	75828701	75828867	True	NR_036235,NM_001128223	chr3,chr3	+,-	MIR4273,ZNF717	-41321,5438
chr4:147735058-147735800	chr4	+	147735169	147735460	True	NM_004575,NM_031956	chr4,chr4	+,-	POU4F2,TTC29	-175183,131633
chr21:47747266-47747852	chr21	+	47747515	47747771	True	NM_006031,NM_058180	chr21,chr21	+,-	PCNT,C21orf58	-3537,-3730
chr17:47045495-47046599	chr17	+	47045736	47046284	True	NM_001160423,NM_004123	chr17,chr17	+,-	IGF2BP1,GIP	28489,-17
chr3:47018192-47018414	chr3	+	47018240	47018350	True	NM_144716,NM_015175	chr3,chr3	-,+	CCDC12,NBEAL2	0,2822
chr19:30434899-30436890	chr19	+	30435442	30436657	True	NM_134447,NM_003796,NM_031448	chr19,chr19,chr19	+,+,-	C19orf2,C19orf2,C19orf12	-2068,-2068,-228990
chr10:74458854-74459187	chr10	+	74458867	74459003	True	NM_138357,NM_006077	chr10,chr10	+,-	CCDC109A,CBARA1	-7043,-72918
chrX:70571171-70571529	chrX	+	70571223	70571313	True	NM_001171162,NM_004606	chrX,chrX	-,+	ZMYM3,TAF1	-96176,14800
chrX:70571171-70571529	chrX	-	70634890	70634974	False	NR_002226,NM_138923	chrX,chrX	-,+	INGX,TAF1	77681,-48827
chrX:47986230-47986811	chrX	+	47986396	47986776	True	NM_205856,NR_033730,NM_001079900	chrX,chrX,chrX	+,-,+	SPACA5,ZNF630,SPACA5B	0,-55371,3262
chrX:47986230-47986811	chrX	+	47863857	47863907	False	NM_001007088,NM_205856,NM_006962,NM_001178099,NM_001079900	chrX,chrX,chrX,chrX,chrX	-,+,-,-,+	ZNF182,SPACA5,ZNF182,ZNF182,SPACA5B	-480,-174,-480,-463,3262
chr3:150264700-150266326	chr3	+	150264756	150265964	True	NM_014445,NM_032025	chr3,chr3	-,+	SERP1,EIF2A	-328,-233
chr4:49290013-49290342	chr4	+	49290149	49290277	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-301935,-381334
chr19:46272932-46273169	chr19	+	46272935	46273162	True	NM_175875,NM_017659	chr19,chr19	-,+	SIX5,QPCTL	-438,-77245
chr9:136605666-136606975	chr9	+	136605980	136606792	True	NM_007101,NM_000787,NM_001134707	chr9,chr9,chr9	-,+,-	SARDH,DBH,SARDH	-903,-104553,-2501
chr2:97764590-97765719	chr2	+	97764647	97765591	True	NM_199336,NM_001164315	chr2,chr2	-,+	FAHD2B,ANKRD36	-4065,13641
chr3:129930411-129931351	chr11	+	67687776	67687826	True	NM_030930,NM_001161473	chr11,chr11	-,+	UNC93B1,ALDH3B1	83817,88221
chr3:129930411-129931351	chr3	+	129930554	129931265	False	NR_027898,NR_024252	chr3,chr3	+,-	COL6A4P2,LOC729375	397,-100278
chr7:100077366-100078512	chr7	+	100078086	100078249	True	NM_030935,NM_173564	chr7,chr7	-,+	TSC22D4,C7orf51	-1184,3300
chr9:102587433-102587877	chr9	+	102587573	102587925	True	NM_173199,NM_015051,NM_173200,NM_006981	chr9,chr9,chr9,chr9	+,-,+,+	NR4A3,ERP44,NR4A3,NR4A3	-3487,273455,1083,-3487
chr9:115245781-115246507	chr9	+	115245836	115246556	True	NR_036085,NM_133465	chr9,chr9	-,+	MIR3134,KIAA1958	-133291,2691
chr15:54320494-54320978	chr15	+	54320503	54320735	True	NM_182758,NM_001080534	chr15,chr15	-,+	WDR72,UNC13C	-268644,-15460
chr16:55847049-55847816	chr16	+	55847048	55847848	True	NR_003276,NM_001025194	chr16,chr16	+,-	CES1P1,CES1	-52588,19277
chr16:55847049-55847816	chr16	-	55816760	55816810	False	NR_003276,NM_001025194	chr16,chr16	+,-	CES1P1,CES1	-22300,50315
chr16:30595032-30596505	chr16	+	30595486	30596304	True	NM_152458,NM_024031	chr16,chr16	-,+	ZNF785,PRR14	838,65936
chr13:76207188-76208801	chr13	+	76207286	76207855	True	NM_005358,NM_203497	chr13,chr13	+,-	LMO7,COMMD6	-12769,-95295
chr13:30884236-30885697	chr13	+	30884331	30885637	True	NM_005800,NM_032116,NM_001014380	chr13,chr13,chr13	+,-,-	USPL1,KATNAL1,KATNAL1	306192,-2747,-3168
chr16:20818024-20818375	chr16	+	20818026	20818407	True	NM_030941,NM_001142725,NM_080663,NM_001199053,NM_001144924	chr16,chr16,chr16,chr16,chr16	+,-,-,+,+	LOC81691,ERI2,ERI2,LOC81691,LOC81691	-310,-231,-231,-310,-310
chr7:128578979-128579511	chr7	+	128579166	128579447	True	NM_199349,NM_001098629,NM_032643,NM_001098630,NM_001098627	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	KCP,IRF5,IRF5,IRF5,IRF5	-28393,-1223,-946,-1223,1324
chrX:57102536-57103560	chrX	+	57102651	57103576	True	NM_001006681,NM_174912	chrX,chrX	-,+	SPIN2B,FAAH2	44453,209533
chr4:66535617-66536071	chr4	+	66535678	66536016	True	NM_182472,NR_034138,NM_004439	chr4,chr4,chr4	-,+,-	EPHA5,LOC100144602,EPHA5	-25,-51,-25
chr13:111212101-111213104	chr13	+	111212283	111213141	True	NM_017817,NM_018210	chr13,chr13	-,+	RAB20,CARKD	980,54866
chr5:178773615-178775196	chr5	+	178773678	178775239	True	NM_021599,NM_014244,NM_025158	chr5,chr5,chr5	-,-,+	ADAMTS2,ADAMTS2,RUFY1	-1247,-1247,202331
chr3:93737700-93739565	chr3	+	93738475	93739588	True	NR_033427,NM_001001850	chr3,chr3	+,-	ARL13B,STX19	-39551,7927
chr8:39440495-39442057	chr8	+	39440590	39441960	True	NM_001190956,NM_014237,NR_024107	chr8,chr8,chr8	+,+,-	ADAM18,ADAM18,ADAM3A	126,126,-60120
chr17:62098035-62098260	chr17	+	62098035	62098141	True	NM_001099788,NM_001099789,NM_001099786,NM_001099787,NM_001191031	chr17,chr17,chr17,chr17,chr17	-,-,-,-,+	ICAM2,ICAM2,ICAM2,ICAM2,C17orf72	-41,-41,-41,-41,-22375
chrX:129266989-129268491	chrX	+	129267101	129268532	True	NM_001130846,NM_004794	chrX,chrX	-,+	AIFM1,RAB33A	3533,37240
chr9:136999422-136999628	chr9	+	136999469	136999651	True	NR_023344,NM_017588,NM_052821	chr9,chr9,chr9	-,+,+	RNU6ATAC,WDR5,WDR5	30085,1558,5262
chr10:23220148-23220362	chr10	+	23220153	23220414	True	NM_005028,NM_173081	chr10,chr10	-,+	PIP4K2A,ARMC3	-216650,-3256
chr19:20190646-20191251	chr19	+	20190693	20191150	True	NM_033196,NM_007138	chr19,chr19	-,+	ZNF682,ZNF90	-40416,-1946
chr1:48639170-48640048	chr1	+	48639279	48639952	True	NR_026749,NM_001011547	chr1,chr1	-,+	SKINTL,SLC5A9	8199,48404
chr19:45395295-45395946	chr19	+	45395350	45395875	True	NM_145288,NM_006114,NM_001128916,NM_001128917	chr19,chr19,chr19,chr19	-,+,+,+	ZNF296,TOMM40,TOMM40,TOMM40	183864,-933,-933,-933
chr2:107104124-107104336	chr2	+	107104277	107104341	True	NM_001144013,NR_003506	chr2,chr2	-,+	RGPD3,PLGLA	-19476,-101559
chr18:713625-715154	chr18	+	713930	715046	True	NM_001126123,NM_001071,NM_202758,NM_017512	chr18,chr18,chr18,chr18	-,+,-,-	ENOSF1,TYMS,ENOSF1,ENOSF1	-1268,-56384,-1413,-1268
chr1:228288294-228288656	chr1	+	228288473	228288691	True	NM_181456,NM_181454,NM_181455,NM_181441,NM_181463,NM_181465,NM_181464,NM_024319,NR_037415,NM_181462	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,-,-,-,+,-	MRPL55,MRPL55,MRPL55,MRPL55,MRPL55,MRPL55,MRPL55,C1orf35,MIR3620,MRPL55	8372,8372,8372,8372,8372,8372,8372,2381,-3560,8372
chr12:8491905-8493153	chr12	+	8492021	8492114	True	NM_001007033,NR_024420	chr12,chr12	+,-	CLEC6A,LOC389634	116476,51293
chr5:111757537-111758844	chr5	+	111757745	111758741	True	NR_027706,NM_022140	chr5,chr5	+,-	FLJ11235,EPB41L4A	-2516,-2735
chr6:24404509-24405405	chr6	+	24404760	24405434	True	NM_001195610,NM_020662	chr6,chr6	-,+	DCDC2,MRS2	-21240,-1669
chr5:128795072-128795339	chr5	+	128795071	128795387	True	NM_133638,NM_001999	chr5,chr5	+,-	ADAMTS19,FBN2	715,-921336
chr17:43569216-43570837	chr17_ctg5_hap1	+	184485	185603	False	NM_014798,NR_027774,NR_027782,NM_001113738	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	-,-,-,+	PLEKHM1,PLEKHM1,PLEKHM1,ARL17A	-1271,-1271,-1271,10117
chr17:43569216-43570837	chr17	+	43569415	43570536	True	NR_037772,NM_014798,NR_027774,NR_027782	chr17,chr17,chr17,chr17	+,-,-,-	CRHR1,PLEKHM1,PLEKHM1,PLEKHM1	127173,-1269,-1269,-1269
chr17:43569216-43570837	chr17	+	62834581	62834631	False	NR_024386,NM_001165933	chr17,chr17	-,+	PLEKHM1P,RGS9	-1279,298824
chr7:92219103-92219495	chr7	+	92219194	92219444	True	NR_026902,NM_152789,NM_001040057,NR_034169	chr7,chr7,chr7,chr7	+,-,-,-	MGC16142,FAM133B,FAM133B,LOC728066	-51456,312,312,302
chr15:43939208-43939505	chr15	+	43939209	43939523	True	NM_054020,NM_172097,NM_172095,NM_001015001	chr15,chr15,chr15,chr15	-,-,-,+	CATSPER2,CATSPER2,CATSPER2,CKMT1A	1566,1566,1566,45560
chr15:43939208-43939505	chr15	+	44036532	44036624	False	NR_002318,NM_005313	chr15,chr15	-,+	CATSPER2P1,PDIA3	1922,1965
chr10:75678178-75679088	chr10	+	75678383	75678929	True	NM_002658,NM_001001791,NM_001145031	chr10,chr10,chr10	+,-,+	PLAU,C10orf55,PLAU	-7572,3656,-7572
chr4:89953249-89954025	chr4	+	89953458	89954060	True	NM_014883,NM_145715	chr4,chr4	-,+	FAM13A,TIGD2	24313,79907
chr7:6144005-6144291	chr7	+	6144034	6144136	True	NM_032172,NM_014413	chr7,chr7	+,-	USP42,EIF2AK1	413,-45174
chr19:42386571-42386934	chr19	+	42386696	42386934	True	NM_198977,NM_001783,NM_021601,NM_004706,NM_199002,NM_173506	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,-	ARHGEF1,CD79A,CD79A,ARHGEF1,ARHGEF1,LYPD4	332,-5557,-5557,332,1511,-38188
chr6:147832153-147833252	chr6	+	147832171	147832942	True	NM_001030060,NR_034115	chr6,chr6	+,-	SAMD5,LOC729178	-2394,-306421
chr8:38324625-38324951	chr8	+	38324817	38324913	True	NM_001174065,NM_001174064,NM_001174067,NM_001174066,NM_001174063,NM_023110,NM_023105,NM_015850,NM_023106,NM_001199660	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,-,-,-,-,-,+	FGFR1,FGFR1,FGFR1,FGFR1,FGFR1,FGFR1,FGFR1,FGFR1,FGFR1,LETM2	500,1489,500,500,1489,1489,1489,1489,1489,-80219
chr2:220084674-220085455	chr2	+	220084693	220085453	True	NM_024085,NM_001077198,NM_018089,NM_001042410,NM_005689	chr2,chr2,chr2,chr2,chr2	-,-,+,+,-	ATG9A,ATG9A,ANKZF1,ANKZF1,ABCB6	8958,8958,9025,9156,-981
chr7:98468010-98468310	chr7	+	98468092	98468198	True	NM_001134450,NM_001134451,NM_152913,NM_003496	chr7,chr7,chr7,chr7	-,-,-,+	TMEM130,TMEM130,TMEM130,TRRAP	-419,-419,-419,7914
chr17:41833925-41835471	chr17	+	41834038	41835366	True	NM_025237,NM_001136483	chr17,chr17	-,+	SOST,C17orf105	840,22436
chr3:12330308-12331883	chr3	+	12330441	12331800	True	NM_003256,NM_005037,NM_138711,NM_138712	chr3,chr3,chr3,chr3	-,+,+,+	TIMP4,PPARG,PPARG,PPARG	-129590,-1143,-56,-1143
chr2:64372264-64372512	chr2	+	64372376	64372552	True	NM_006759,NM_020651	chr2,chr2	+,-	UGP2,PELI1	-303414,-771
chr6:11380465-11380957	chr6	+	11380501	11380983	True	NM_001142393,NM_001100829	chr6,chr6	-,+	NEDD9,TMEM170B	1648,157527
chr10:115805347-115805592	chr10	+	115805375	115805455	True	NM_000684,NR_031747	chr10,chr10	+,-	ADRB1,MIR2110	-1620,128533
chr1:205327421-205328618	chr1	+	205327622	205328395	True	NM_014858,NM_018203	chr1,chr1	+,-	TMCC2,KLHDC8A	-130643,-1583
chr1:24436576-24437652	chr1	+	24436613	24437617	True	NM_152372,NR_027087	chr1,chr1	-,+	MYOM3,LOC284632	1098,89112
chr15:95398976-95399185	chr15	+	95398976	95399162	True	NM_001159644,NR_034095	chr15,chr15	+,-	MCTP2,LOC400456	-499863,471217
chrX:53077521-53077748	chrX	+	53077579	53077639	True	NM_018969,NM_014138	chrX,chrX	+,-	GPR173,FAM156A	866,-91403
chr13:103426199-103426671	chr13	+	103426415	103426495	True	NM_001159596,NM_138779	chr13,chr13	+,-	BIVM,C13orf27	24903,-266
chr19:2476991-2477192	chr19	+	2477072	2477170	True	NM_032737,NM_015675	chr19,chr19	-,+	LMNB2,GADD45B	-20114,-1000
chr10:6334796-6335602	chr10	+	6334857	6335309	True	NM_004566,NM_000417	chr10,chr10	+,-	PFKFB3,IL2RA	-90075,-230524
chr2:197791773-197792123	chr2	+	197791904	197792120	True	NM_001080539,NM_024989	chr2,chr2	+,-	CCDC150,PGAP1	-287599,-450
chr11:18476509-18477314	chr11	+	18476608	18477255	True	NM_144972,NM_001144071,NM_006292	chr11,chr11,chr11	+,+,-	LDHAL6A,LDHAL6A,TSG101	118,118,71284
chr17:73043790-73044048	chr17	+	73043897	73044095	True	NM_015353,NM_006356,NM_001003785	chr17,chr17,chr17	+,-,-	KCTD2,ATP5H,ATP5H	-669,-823,-823
chr2:161036328-161037598	chr2	+	161036715	161037229	True	NM_000888,NM_022826	chr2,chr2	-,+	ITGB6,MARCH7	19418,-467763
chr17:4474035-4474760	chr17	+	4474313	4474739	True	NM_198501,NM_153338	chr17,chr17	+,-	SMTNL2,GGT6	12536,-10437
chr10:104221440-104221876	chr10	+	104221493	104221743	True	NM_024789,NM_024886	chr10,chr10	+,-	TMEM180,C10orf95	-374,-10193
chr15:40675561-40676429	chr15	+	40675649	40676291	True	NM_001142762,NM_001142761,NM_207380,NM_033286	chr15,chr15,chr15,chr15	+,+,-,+	C15orf23,C15orf23,C15orf52,C15orf23	-778,-778,-42481,-778
chr5:7878156-7879465	chr5	+	7878203	7879363	True	NM_002454,NR_036553,NM_024010,NM_024091	chr5,chr5,chr5,chr5	+,-,+,-	MTRR,FASTKD3,MTRR,FASTKD3	-9037,-9053,-9037,-9053
chrX:52386498-52387241	chrX	+	52386561	52387231	True	NM_130777,NM_001097592,NM_001079538	chrX,chrX,chrX	-,+,-	XAGE2,XAGE1A,XAGE2B	-13,124529,-545
chrX:52386498-52387241	chrX	-	52111942	52112612	False	NR_033251,NM_130777,NM_001079538	chrX,chrX,chrX	-,+,+	XAGE1C,XAGE2,XAGE2B	147592,13,545
chr3:100999647-101000651	chr3	+	100999898	101000585	True	NM_016247,NR_036433	chr3,chr3	-,+	IMPG2,FAM172B	38885,237130
chr20:35089304-35089569	chr20	+	35089309	35089591	True	NM_183006,NM_032214,NM_001042486	chr20,chr20,chr20	+,-,+	DLGAP4,SLA2,DLGAP4	550,185017,250
chr9:104292179-104292610	chr9	+	104292200	104292648	True	NM_019592,NM_032342	chr9,chr9	+,-	RNF20,C9orf125	3484,-42725
chr22:41253393-41254827	chr22	+	41253421	41254515	True	NM_001204827,NM_022098,NM_145174,NM_003932	chr22,chr22,chr22,chr22	+,+,-,-	XPNPEP3,XPNPEP3,DNAJB7,ST13	-387,-387,3665,-734
chr9:99694138-99694470	chr9	+	99694303	99694487	True	NM_001170741,NM_001045477,NM_001001662	chr9,chr9,chr9	+,+,-	FAM22G,FAM22G,ZNF782	-3068,-3068,-77914
chr9:99694138-99694470	chr9	-	97087732	97087916	False	NM_017561,NR_033937	chr9,chr9	-,+	FAM22F,LOC100132077	3060,6841
chr22:25419641-25420901	chr22	+	25419997	25420867	True	NM_001001663,NM_001145206	chr22,chr22	-,+	TMEM211,KIAA1671	-84683,3073
chr1:225615049-225615276	chr1	+	225615048	225615184	True	NM_194442,NM_002296,NM_001130440	chr1,chr1,chr1	-,-,+	LBR,LBR,SRP9	1423,681,350330
chr19:4339158-4340324	chr19	+	4339163	4339479	True	NM_001159846,NM_001013841,NM_032868,NM_017720	chr19,chr19,chr19,chr19	+,-,+,-	MPND,STAP2,MPND,STAP2	4044,-316,4044,-316
chr11:14992556-14993605	chr11	+	14992584	14993490	True	NM_000728,NM_001033953,NM_001033952,NM_001741	chr11,chr11,chr11,chr11	+,-,-,-	CALCB,CALCA,CALCA,CALCA	101655,392,392,392
chr6:37465485-37466317	chr6	+	37465694	37466262	True	NM_015050,NM_138493	chr6,chr6	+,-	FTSJD2,C6orf129	-64844,1488
chr5:56513319-56514922	chr5	+	56513447	56514846	True	NM_001127236,NM_001017992	chr5,chr5	+,-	GPBP1,ACTBL2	-3610,263847
chr17:33387804-33389143	chr17	+	33387833	33389049	True	NM_017559,NM_001017368	chr17,chr17	+,-	FNDC8,RFFL	59581,1763
chr1:151823693-151824770	chr1	+	151823721	151824673	True	NR_024237,NM_182578	chr1,chr1	+,-	LOC100132111,THEM5	-12828,1550
chr18:12376208-12376650	chr18	+	12376246	12376628	True	NM_006796,NM_001142405	chr18,chr18	-,+	AFG3L2,SLMO1	697,31266
chr3:120067834-120068055	chr3	+	120067842	120068054	True	NM_001099678,NM_001168331	chr3,chr3	-,+	LRRC58,NDUFB4	182,247073
chr15:23811041-23811409	chr15	+	23811192	23811316	True	NM_005664,NM_019066	chr15,chr15	+,-	MKRN3,MAGEL2	-789,81727
chr20:44520616-44521158	chr20	+	44520752	44521146	True	NM_000308,NM_080749,NM_001167594,NM_080608,NM_001127695	chr20,chr20,chr20,chr20,chr20	+,-,+,-,+	CTSA,NEURL2,CTSA,C20orf165,CTSA	-1212,-851,-1212,-4514,-1212
chr3:187390263-187391023	chr3	+	187390425	187391047	True	NM_001048,NR_034062	chr3,chr3	-,+	SST,LOC100131635	-2224,29106
chr18:597630-598804	chr18	+	597744	598815	True	NM_014410,NM_001012716	chr18,chr18	+,-	CLUL1,C18orf56	-812,59582
chr17:73256682-73257212	chr17	+	73256709	73257151	True	NM_015971,NM_001172703,NM_001172704,NM_138619,NR_033345,NM_014001	chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,-,-,-	MRPS7,GGA3,GGA3,GGA3,GGA3,GGA3	597,1343,1343,606,606,606
chr18:34506834-34507692	chr18	+	34506960	34507376	True	NM_020776,NM_015476	chr18,chr18	+,-	KIAA1328,C18orf10	-97939,-97802
chr14:64189636-64190291	chr14	+	64189849	64190144	True	NM_030791,NM_015180	chr14,chr14	-,+	SGPP1,SYNE2	4667,129538
chrX:101677304-101678860	chrX	+	101677627	101678899	True	NR_002216,NM_022053	chrX,chrX	+,-	NXF4,NXF2	125993,16004
chrX:101677304-101678860	chrX	-	101518139	101519411	False	NM_001012978,NM_022053	chrX,chrX	-,+	BEX5,NXF2	-107153,-16020
chr7:6678585-6680555	chr7	+	6678587	6680140	True	NM_017560,NM_006956	chr7,chr7	+,-	ZNF853,ZNF12	-23111,66478
chr7:156434401-156435089	chr7	+	156434400	156435102	True	NR_026865,NM_001184996,NM_001184997,NM_030936	chr7,chr7,chr7,chr7	-,+,+,+	C7orf13,RNF32,RNF32,RNF32	-1052,-1017,568,-1105
chr11:2017781-2018079	chr11	+	2017995	2018075	True	NR_002196,NR_024471,NR_030533,NM_021134	chr11,chr11,chr11,chr11	-,-,-,+	H19,LOC100133545,MIR675,MRPL23	1040,-6845,36,-49544
chr2:69010801-69011515	chr2	+	69011013	69011542	True	NM_014482,NM_001166276,NM_014882	chr2,chr2,chr2	-,+,+	BMP10,ARHGAP25,ARHGAP25	87158,-9132,-9132
chr17:39724807-39726081	chr17	+	39724844	39725990	True	NM_000226,NM_005801	chr17,chr17	-,+	KRT9,EIF1	2370,119136
chr18:29669223-29671021	chr18	+	29669343	29670930	True	NM_014939,NM_001191324,NM_198128,NM_016271	chr18,chr18,chr18,chr18	-,+,+,+	TRAPPC8,RNF138,RNF138,RNF138	-146252,1638,1638,887
chr1:236229209-236229979	chr1	+	236229297	236229918	True	NM_002508,NM_003272	chr1,chr1	-,+	NID1,GPR137B	-816,75913
chr7:150976846-150977159	chr7	+	150976859	150977035	True	NM_001003802,NR_030407,NM_003078	chr7,chr7,chr7	-,+,-	SMARCD3,MIR671,SMARCD3	-3039,-41403,-2628
chr3:11612602-11613222	chr3	+	11612695	11613255	True	NM_006395,NM_001128221	chr3,chr3	+,-	ATG7,VGLL4	-298736,-2297
chr11:40315043-40315539	chr11	+	40315213	40315569	True	NM_020929,NM_001142930	chr11,chr11	-,+	LRRC4C,API5	145,3017935
chr22:26138356-26138865	chr22	+	26138368	26138832	True	NM_001135772,NM_032608	chr22,chr22	-,+	LRP5L,MYO18B	-360824,-299
chr6:168596066-168596581	chr6	+	168596161	168596581	True	NM_030615,NM_024919	chr6,chr6	+,-	KIF25,FRMD1	-177659,-116322
chr3:100371685-100373022	chr3	+	100371850	100373058	True	NM_032787,NM_014820	chr3,chr3	+,-	GPR128,TOMM70A	-43470,-251625
chr22:38053912-38054682	chr22	+	38053961	38054521	True	NM_020315,NM_006498	chr22,chr22	+,-	PDXP,LGALS2	215,-77937
chr1:109937140-109938588	chr1	+	109937141	109938313	True	NM_001040709,NM_002959,NM_001205228	chr1,chr1,chr1	+,-,-	SYPL2,SORT1,SORT1	70786,2300,-1162
chr17:72872377-72873283	chr17	+	72872407	72872993	True	NM_178160,NM_004110,NM_024417	chr17,chr17,chr17	+,-,-	OTOP2,FDXR,FDXR	47376,-3251,-3251
chr17:7910385-7910746	chr17	+	7910441	7910767	True	NM_000180,NR_030697	chr17,chr17	+,-	GUCY2D,TRAPPC1	-4504,-75124
chr15:41808063-41809880	chr15	+	41808620	41809870	True	NM_002220,NM_206961,NM_002344,NM_001135685	chr15,chr15,chr15,chr15	+,-,-,-	ITPKA,LTK,LTK,LTK	-22549,-2535,-2535,-2535
chr4:187182662-187182919	chr4	+	187182672	187182924	True	NM_000128,NR_033900	chr4,chr4	+,-	F11,LOC285441	4193,239338
chr1:179558952-179560144	chr1	+	179558951	179560133	True	NM_001199091,NM_001199085,NM_173533,NM_014625,NM_001199089	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	TDRD5,TDRD5,TDRD5,NPHS2,TDRD5	614,623,623,-13867,855
chr18:5895892-5896112	chr18	+	5895980	5896096	True	NM_001080209,NR_015389	chr18,chr18	-,+	TMEM200C,LOC339290	-3877,-657932
chr8:110987274-110987590	chr8	+	110987348	110987610	True	NM_014379,NM_004215	chr8,chr8	-,+	KCNV1,EBAG9	-389,-435089
chr2:231859780-231860894	chr2	+	231859893	231860943	True	NR_033879,NM_139073	chr2,chr2	-,+	LOC348761,SPATA3	-146,-105
chr4:74702557-74702956	chr4	+	74702696	74702954	True	NM_002993,NM_002619	chr4,chr4	+,-	CXCL6,PF4	-474,144811
chr11:47279388-47280076	chr11	+	47279570	47279988	True	NM_001130102,NM_001610,NM_001130101,NM_001131064,NM_005693	chr11,chr11,chr11,chr11,chr11	+,-,+,-,+	NR1H3,ACP2,NR1H3,ACP2,NR1H3	-9172,-9113,-124,-9113,-124
chr20:62709938-62710817	chr20	+	62710106	62710782	True	NM_182647,NM_001007125,NM_001039467,NM_001200019,NM_000913,NM_005873	chr20,chr20,chr20,chr20,chr20,chr20	+,-,-,+,+,-	OPRL1,C20orf201,RGS19,OPRL1,OPRL1,RGS19	688,4980,592,5586,688,113
chr5:151296345-151297922	chr5	+	151296535	151297881	True	NM_198395,NM_000171,NM_001146040	chr5,chr5,chr5	+,-,-	G3BP1,GLRA1,GLRA1	-145110,6566,6566
chr19:38916754-38916962	chr19	+	38916761	38916995	True	NM_170604,NM_001146204,NM_001146205,NM_001146206,NM_001146207,NM_001146202,NM_001146203,NM_000540,NM_001042723	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,+,+	RASGRP4,RASGRP4,RASGRP4,RASGRP4,RASGRP4,RASGRP4,RASGRP4,RYR1,RYR1	0,0,0,0,0,0,0,7344,7344
chr8:117762740-117763171	chr8	+	117762990	117763179	True	NM_003756,NM_032334	chr8,chr8	-,+	EIF3H,UTP23	4936,15562
chr1:21111574-21112171	chr1	+	21111781	21112219	True	NM_016287,NM_032409	chr1,chr1	-,+	HP1BP3,PINK1	1012,-151889
chr20:57554309-57555735	chr20	+	57554406	57555240	True	NM_001336,NM_198976	chr20,chr20	-,+	CTSZ,TH1L	27126,1070
chr12:118572479-118573043	chr12	+	118572576	118572869	True	NM_002567,NM_019086	chr12,chr12	+,-	PEBP1,VSIG10	1000,-30766
chr15:68717977-68718239	chr15	+	68717984	68718274	True	NM_015322,NM_001004439	chr15,chr15	+,-	FEM1B,ITGA11	-147894,6268
chr14:61116370-61116633	chr14	+	61116480	61116658	True	NM_001177963,NM_005982	chr14,chr14	+,-	MNAT1,SIX1	84800,-325
chr18:44551658-44552690	chr18	+	44551801	44552688	True	NM_145653,NM_001100817,NM_016427,NM_031303	chr18,chr18,chr18,chr18	-,-,-,+	TCEB3C,TCEB3CL,TCEB3B,KATNAL2	-1267,-1503,9353,-25065
chr18:44551658-44552690	chr18	+	44545876	44546765	False	NM_145653,NM_001100817,NM_031303	chr18,chr18,chr18	-,-,+	TCEB3C,TCEB3CL,KATNAL2	3822,-1505,-19140
chr2:220463969-220464684	chr2	+	220464098	220464379	True	NM_001173408,NM_052902	chr2,chr2	-,+	OBSL1,STK11IP	-27830,-1553
chr5:40841296-40842903	chr5	+	40841339	40842843	True	NM_032587,NR_002583,NM_000997	chr5,chr5,chr5	+,-,-	CARD6,SNORD72,RPL37	7,-8502,-5952
chr15:65206617-65206965	chr15	+	65206883	65206959	True	NM_182703,NM_001127889	chr15,chr15	+,-	ANKDD1A,SPG21	-2835,74903
chr22:19514614-19514819	chr22	+	19514642	19514778	True	NM_001130861,NM_003277,NM_003504	chr22,chr22,chr22	-,-,+	CLDN5,CLDN5,CDC45	-1782,-1782,-47277
chr5:87971819-87972054	chr5	+	87971869	87972040	True	NR_024383,NR_030741,NR_015436,NM_022650,NR_024384	chr5,chr5,chr5,chr5,chr5	-,-,-,+,-	LOC645323,MIR9-2,LOC645323,RASA1,LOC645323	2272,-9112,8630,-1407154,-2723
chr12:69328848-69330254	chr12	+	69329363	69329907	True	NM_001005502,NM_198320,NM_002392	chr12,chr12,chr12	-,-,+	CPM,CPM,MDM2	-2384,-2384,-127449
chr12:66516612-66517069	chr12	+	66516615	66516918	True	NM_032338,NM_001142523	chr12,chr12	-,+	LLPH,IRAK3	7672,66059
chr1:100318219-100319465	chr1	+	100318356	100319153	True	NM_000643,NM_000642,NM_000645,NM_000644,NM_000646,NM_000028,NM_001013660	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,+,-	AGL,AGL,AGL,AGL,AGL,AGL,FRRS1	-2363,-2768,7612,-2363,-1877,-2363,-87007
chr7:35837432-35838219	chr7	+	35837681	35838054	True	NM_022373,NM_001788,NM_001011553	chr7,chr7,chr7	-,+,+	HERPUD2,SEPT7,SEPT7	-102909,2572,2572
chr20:60941189-60941416	chr20	+	60941282	60941350	True	NM_001024,NM_005560	chr20,chr20	+,-	RPS21,LAMA5	20770,1068
chr22:51201330-51201966	chr22	+	51201490	51201942	True	NM_001003789,NR_026981	chr22,chr22	-,+	RABL2B,RPL23AP82	20197,-6036
chr22:51201330-51201966	chr2	-	114404982	114405412	False	NR_024531,NM_013412	chr2,chr2	-,+	RPL23AP7,RABL2A	-20267,-20218
chr12:133653872-133655013	chr12	+	133653959	133654960	True	NM_003440,NM_001164715	chr12,chr12	+,-	ZNF140,ZNF605	2076,-121067
chr5:50677840-50678054	chr5	+	50677851	50678083	True	NM_198449,NM_002202	chr5,chr5	-,+	EMB,ISL1	-940617,874
chr3:192445023-192445531	chr3	+	192445048	192445560	True	NM_020386,NM_004113	chr3,chr3	+,-	HRASLS,FGF12	513357,62
chr17:3626884-3627101	chr17	+	3626954	3627102	True	NM_175080,NM_031965	chr17,chr17	-,+	P2RX5,GSG2	-27256,94
chr11:33184198-33184941	chr11	+	33184355	33184726	True	NR_034027,NM_001033505,NM_001033506,NM_001326	chr11,chr11,chr11,chr11	+,-,-,-	LOC338739,CSTF3,CSTF3,CSTF3	-1217,-1318,-1318,-1318
chr18:11980985-11981217	chr18	+	11981123	11981193	True	NM_023075,NM_014214	chr18,chr18	-,+	MPPE1,IMPA2	-72482,233
chr14:21490811-21492431	chr14	+	21491213	21492447	True	NM_201536,NM_201537,NM_201535,NM_173846,NM_201538,NM_016250,NM_201539,NM_201541,NM_201540	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	-,-,-,+,-,-,-,-,-	NDRG2,NDRG2,NDRG2,TPPP2,NDRG2,NDRG2,NDRG2,NDRG2,NDRG2	1538,1538,1538,5897,867,1538,867,867,867
chrX:152864630-152864846	chrX	+	152864727	152864793	True	NM_001130997,NM_152274,NM_001395	chrX,chrX,chrX	-,-,+	FAM58A,FAM58A,DUSP9	-95,-95,43103
chr17:4980932-4981240	chr17	+	4981031	4981227	True	NM_017986,NM_153018	chr17,chr17	-,+	GPR172B,ZFP3	-42304,526
chr12:4931294-4931630	chr12	+	4931395	4931574	True	NM_006422,NM_002235	chr12,chr12	-,+	AKAP3,KCNA6	-177052,-13111
chr2:26370774-26371183	chr2	+	26370817	26371034	True	NM_000182,NM_001168241	chr2,chr2	-,+	HADHA,FAM59B	96621,24925
chr19:53325078-53325447	chr19	+	53325190	53325255	True	NR_036599,NR_036600,NM_152473,NM_006969	chr19,chr19,chr19,chr19	-,-,+,-	ZNF28,ZNF28,HERV-V1,ZNF28	-268,-268,192088,-268
chr2:110651817-110652357	chr2	+	110651985	110652325	True	NR_036225,NR_038099,NR_027467,NM_001205288,NR_027145,NM_033514	chr2,chr2,chr2,chr2,chr2,chr2	-,+,+,+,+,+	MIR4267,LOC100288695,LIMS3,LOC100288695,LIMS3-LOC440895,LIMS3	175344,3683,3683,3683,3683,3683
chr2:110651817-110652357	chr2	-	111234335	111234675	False	NR_037626,NR_038099,NR_027467,NM_001205288,NR_027145,NM_033514	chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-	LOC100507334,LOC100288695,LIMS3,LOC100288695,LIMS3-LOC440895,LIMS3	-231171,-3683,-3683,-3683,-3683,-3683
chr2:110651817-110652357	chr2	+	109267245	109267539	False	NM_001193485,NM_022336	chr2,chr2	+,-	LIMS1,EDAR	3727,338339
chr8:23560588-23560929	chr8	+	23560627	23560891	True	NM_016612,NM_001136271	chr8,chr8	+,-	SLC25A37,NKX2-6	-174315,3083
chr1:169555444-169555698	chr1	+	169555448	169555710	True	NM_018186,NM_000130	chr1,chr1	+,-	C1orf112,F5	208839,109
chr1:226175874-226176719	chr1	+	226175886	226176606	True	NM_152608,NM_002107	chr1,chr1	-,+	C1orf55,H3F3A	10510,73801
chr9:130954571-130954980	chr9	+	130954671	130954731	True	NM_001005336,NM_001131018,NM_001131017,NM_001131016	chr9,chr9,chr9,chr9	+,-,-,-	DNM1,CIZ1,CIZ1,CIZ1	10931,-803,-803,-803
chr4:25509527-25509975	chr4	+	25509714	25509952	True	NM_013367,NM_016955	chr4,chr4	+,-	ANAPC4,SEPSECS	-130920,-347510
chr3:149792131-149793100	chr3	+	149792283	149793151	True	NM_053024,NR_036538	chr3,chr3	-,+	PFN2,LOC646903	-103542,-103268
chr8:146017012-146017245	chr8	+	146017052	146017257	True	NM_000973,NM_033301,NM_030580,NM_213605	chr8,chr8,chr8,chr8	-,-,-,+	RPL8,RPL8,ZNF34,ZNF517	598,522,-4327,7003
chr1:68153049-68153399	chr1	+	68153092	68153433	True	NM_018841,NM_001924,NM_001199741,NM_001199742	chr1,chr1,chr1,chr1	-,+,+,+	GNG12,GADD45A,GADD45A,GADD45A	145773,-2283,-2283,-2283
chr8:123791987-123792332	chr8	+	123792019	123792332	True	NM_014943,NM_001134671	chr8,chr8	+,-	ZHX2,DERL1	1568,262367
chr11:15140950-15141536	chr11	+	15141039	15141567	True	NM_001031853,NM_001741,NM_001042536	chr11,chr11,chr11	+,-,+	INSC,CALCA,INSC	-7120,-147207,-4606
chrX:44600679-44602069	chr19	+	24010412	24010472	True	NM_138286,NR_003662	chr19,chr19	-,+	ZNF681,RPSAP58	-68719,-64657
chr12:47604709-47605663	chr12	+	47604756	47605080	True	NM_138371,NR_026544	chr12,chr12	+,-	FAM113B,LOC100233209	4971,5196
chr20:40230551-40231478	chr20	+	40230637	40231153	True	NM_032221,NM_022896	chr20,chr20	-,+	CHD6,LPIN3	16030,-261128
chr19:16652352-16652617	chr19	+	16652379	16652655	True	NM_006387,NM_032207	chr19,chr19	-,+	CHERP,C19orf44	658,-45228
chr12:81491196-81491831	chr12	+	81491385	81491846	True	NM_024560,NM_004664	chr12,chr12	+,-	ACSS3,LIN7A	-19627,-159691
chr3:195451162-195451621	chr3	+	195451173	195451645	True	NM_001098516,NM_004532,NM_152673	chr3,chr3,chr3	+,-,+	MUC20,MUC4,MUC20	-126,87553,-3471
chr3:195451162-195451621	chr3	+	195345121	195345593	False	NM_001647,NR_003265	chr3,chr3	-,+	APOD,SDHAP2	-34045,39316
chr6:8064747-8065512	chr6	+	8064802	8065550	True	NM_201280,NR_037616,NM_001199323,NM_001199322,NR_027712	chr6,chr6,chr6,chr6,chr6	-,-,-,-,+	MUTED,MUTED-TXNDC5,MUTED,MUTED,PIP5K1P1	-155,-155,-155,-155,-78518
chr11:77183545-77184035	chr11	+	77183573	77184008	True	NM_001128620,NM_002576,NM_173039	chr11,chr11,chr11	-,-,+	PAK1,PAK1,AQP11	1161,1161,116671
chr10:90490204-90490918	chr10	+	90490448	90490943	True	NM_001080518,NM_144590	chr10,chr10	+,-	LIPK,ANKRD22	-6199,120840
chr1:183003496-183003775	chr1	+	183003720	183003824	True	NM_030933,NM_002293	chr1,chr1	-,+	SHCBP1L,LAMC1	-81167,-11183
chr1:32110444-32110671	chr1	+	32110541	32110715	True	NR_033688,NR_033686,NM_001525,NM_012392	chr1,chr1,chr1,chr1	-,-,+,-	PEF1,PEF1,HCRTR1,PEF1	-323,173,-27291,173
chr8:62111237-62112835	chr8	+	62111607	62112578	True	NR_034003,NM_173519	chr8,chr8	-,+	LOC100130298,CLVS1	-231300,87946
chr19:49260981-49261215	chr19	+	49261127	49261263	True	NM_019113,NM_000148	chr19,chr19	+,-	FGF21,FUT1	-1834,-2480
chr14:23794458-23794983	chr14	+	23794732	23794928	True	NR_026862,NM_004643	chr14,chr14	-,+	PPP1R3E,PABPN1	-22675,-5386
chr6:170115848-170117267	chr6	+	170116028	170116997	True	NM_018288,NM_133325,NM_001029863	chr6,chr6,chr6	-,-,+	PHF10,PHF10,C6orf120	7159,7159,-13829
chrX:91238085-91238548	chrY	+	5075707	5076125	False	NM_032973,NR_001540	chrY,chrY	+,-	PCDH11Y,TTTY23	-151627,1035576
chrX:91238085-91238548	chrX	+	91238101	91238519	True	NM_001168363,NM_004538	chrX,chrX	+,-	PCDH11X,NAP1L3	-147692,1690213
chr19:33713702-33714137	chr19	+	33713717	33713941	True	NM_002333,NM_019849	chr19,chr19	+,-	LRP3,SLC7A10	-28169,2865
chr14:75174582-75174868	chr14	+	75174683	75174903	True	NM_015962,NM_001039479	chr14,chr14	+,-	FCF1,KIAA0317	4946,4960
chr19:22235270-22235615	chr19	+	22235270	22235562	True	NM_007153,NM_033468	chr19,chr19	-,+	ZNF208,ZNF257	-41525,-55
chr17:66915120-66915547	chr17	+	66915120	66915590	True	NM_007168,NM_212472	chr17,chr17	-,+	ABCA8,PRKAR1A	35993,-406628
chrX:46986930-46988168	chrX	+	46987300	46988114	True	NM_001204466,NM_001135998	chrX,chrX	+,-	RBM10,NDUFB11	16502,16031
chr16:56688867-56689195	chr16	+	56689061	56689243	True	NM_005947,NM_005949,NM_005950	chr16,chr16,chr16	+,+,-	MT1B,MT1F,MT1G	-3308,2611,12784
chr12:94034789-94035072	chr12	+	94034850	94034956	True	NM_003348,NM_003805	chr12,chr12	-,+	UBE2N,CRADD	-198824,36194
chr12:94034789-94035072	chr12	-	104424986	104425068	False	NM_013320,NM_031302	chr12,chr12	+,-	HCFC2,GLT8D2	33167,18897
chr12:94034789-94035072	chr10	-	99190727	99190809	False	NM_002629,NM_016046	chr10,chr10	+,-	PGAM1,EXOSC1	-4751,15009
chr16:28550296-28550635	chr16	+	28550402	28550606	True	NM_138414,NM_001042483,NM_012385	chr16,chr16,chr16	+,-,-	CCDC101,NUPR1,NUPR1	14642,3,3
chr12:54400222-54400426	chr12	+	54400221	54400333	True	NM_006897,NM_022658,NR_003716	chr12,chr12,chr12	+,+,-	HOXC9,HOXC8,HOTAIR	-6395,2556,-37706
chr10:91093679-91094343	chr10	+	91093706	91094170	True	NM_001549,NM_000235,NM_001031683	chr10,chr10,chr10	+,-,+	IFIT3,LIPA,IFIT3	-6155,-82046,-1518
chr11:17568900-17569521	chr11	+	17568906	17569558	True	NM_153676,NM_002478,NM_005709	chr11,chr11,chr11	-,+,-	USH1C,MYOD1,USH1C	-2943,171551,-2943
chr3:77120134-77120433	chr3	+	77120183	77120473	True	NM_001128929,NM_001128223	chr3,chr3	+,-	ROBO2,ZNF717	26689,-1285928
chr15:101457598-101457884	chr15	+	101457696	101457900	True	NM_001040616,NM_024652	chr15,chr15	-,+	LINS,LRRK1	-315251,1559
chr3:72945923-72947796	chr3	+	72946074	72947788	True	NM_001080393,NM_018130	chr3,chr3	+,-	GXYLT2,SHQ1	-8747,-48476
chr2:159652120-159652902	chr2	+	159652255	159652925	True	NM_001171637,NM_001017920	chr2,chr2	-,+	CCDC148,DAPL1	-338990,-477
chr11:118046464-118047309	chr11	+	118046556	118047342	True	NM_004588,NM_019894	chr11,chr11	-,+	SCN2B,TMPRSS4	45,-98880
chr15:49333028-49333696	chr15	+	49333027	49333733	True	NM_014701,NM_001001556,NM_001193489	chr15,chr15,chr15	-,+,-	SECISBP2L,GALK2,SECISBP2L	5077,114242,5077
chr15:55564519-55565529	chr15	+	55564662	55565178	True	NM_004855,NM_004580,NM_183236,NM_183234	chr15,chr15,chr15,chr15	+,-,-,-	PIGB,RAB27A,RAB27A,RAB27A	45954,-2077,-1555,-2178
chrX:53852457-53853173	chrX	+	53852489	53852629	True	NM_031407,NM_001031745	chrX,chrX	-,+	HUWE1,RIBC1	-138816,-402651
chr9:19416414-19416614	chr9	+	19416417	19416513	True	NM_001010,NM_001010887	chr9,chr9	-,+	RPS6,ACER2	-36182,-7543
chr7:148684688-148685950	chr7	+	148684714	148685973	True	NM_004911,NM_020781	chr7,chr7	-,+	PDIA4,ZNF398	39860,137534
chr5:87980326-87980940	chr5	+	87980369	87980893	True	NR_024383,NM_022650,NR_015436	chr5,chr5,chr5	-,+,-	LOC645323,RASA1,LOC645323	-6107,-1415654,5
chr1:220261505-220262842	chr1	+	220262511	220262853	True	NM_018060,NM_006085	chr1,chr1	+,-	IARS2,BPNT1	4601,394
chr5:43547067-43547702	chr5	+	43547507	43547733	True	NM_182789,NM_006451,NM_012343,NM_183323	chr5,chr5,chr5,chr5	-,-,+,-	PAIP1,PAIP1,NNT,PAIP1	9512,9512,55057,9838
chr12:118814078-118814295	chr12	+	118814115	118814309	True	NM_022491,NM_016281	chr12,chr12	+,-	SUDS3,TAOK3	48,-3365
chr7:21984403-21985030	chr7	+	21984439	21985043	True	NM_003777,NM_001127371,NM_001127370,NM_018719	chr7,chr7,chr7,chr7	+,-,-,-	DNAH11,CDCA7L,CDCA7L,CDCA7L	-401657,550,550,550
chr2:152636012-152636979	chr2	+	152636087	152636951	True	NM_004543,NM_001177665	chr2,chr2	-,+	NEB,RIF1	-45086,-369534
chr3:100225214-100226300	chr3	+	100225489	100226337	True	NM_014820,NM_018004	chr3,chr3	-,+	TOMM70A,TMEM45A	-105264,-14089
chr10:100028159-100028367	chr10	+	100028201	100028353	True	NM_014472,NM_032211	chr10,chr10	+,-	C10orf28,LOXL4	-133871,-194
chr11:75475939-75477467	chr11	+	75475984	75477424	True	NM_032564,NM_207577	chr11,chr11	+,-	DGAT2,MAP6	2353,-96505
chr15:83316893-83317279	chr15	+	83316949	83317323	True	NM_030594,NR_003011	chr15,chr15	-,+	CPEB1,SCARNA15	-221,107373
chr9:88873806-88874202	chr9	+	88873806	88874226	True	NM_024635,NM_001010907	chr9,chr9	+,-	NAA35,C9orf153	-317806,343
chr8:37369290-37370782	chr8	+	37369445	37370659	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	182641,234955
chrX:57347588-57348526	chrX	+	57348055	57348411	True	NM_019003,NM_174912	chrX,chrX	-,+	SPIN2A,FAAH2	-183997,-35009
chr17:77021369-77021666	chr17	+	77021392	77021698	True	NM_198594,NM_138793,NM_030968,NM_198593	chr17,chr17,chr17,chr17	+,-,+,+	C1QTNF1,CANT1,C1QTNF1,C1QTNF1	-1192,-15493,-1192,8773
chr1:27962831-27963111	chr1	+	27962985	27963135	True	NM_001042729,NM_005248,NM_001143912	chr1,chr1,chr1	-,-,+	FGR,FGR,FAM76A	-9879,-1258,89354
chr11:1939216-1939514	chr11	+	1939284	1939540	True	NM_001042782,NM_001042780,NM_001042781,NR_036185,NM_006757	chr11,chr11,chr11,chr11,chr11	+,+,+,-,+	TNNT3,TNNT3,TNNT3,MIR4298,TNNT3	1258,1258,1258,-58518,1258
chr10:43932848-43933201	chr10	+	43932887	43933161	True	NR_026693,NM_001098204	chr10,chr10	+,-	ZNF487P,HNRNPF	-364,-28191
chr15:40699223-40699940	chr15	+	40699363	40699937	True	NM_207380,NM_002225,NM_001159508	chr15,chr15,chr15	-,+,+	C15orf52,IVD,IVD	-66195,-1728,-1728
chr11:1412569-1412934	chr11	+	1412894	1412972	True	NM_019009,NM_003957	chr11,chr11	-,+	TOLLIP,BRSK2	-82002,-1819
chr9:99693463-99694021	chr9	+	99693463	99693907	True	NM_001170741,NM_001045477,NM_001001662	chr9,chr9,chr9	+,+,-	FAM22G,FAM22G,ZNF782	-2228,-2228,-77074
chr9:99693463-99694021	chr9	-	97088312	97088756	False	NM_017561,NR_033937	chr9,chr9	-,+	FAM22F,LOC100132077	2220,6001
chr17:36981687-36982285	chr17	+	36981750	36982134	True	NM_017748,NM_006148	chr17,chr17	-,+	CWC25,LASP1	-161,43977
chr13:41538761-41539477	chr13	+	41539060	41539447	True	NM_007187,NM_001145353	chr13,chr13	+,-	WBP4,ELF1	96249,17034
chr4:75722988-75724210	chr4	+	75723175	75724001	True	NM_001729,NM_015393	chr4,chr4	-,+	BTC,PARM1	-3293,134283
chr7:76027712-76029134	chr7	+	76027996	76028838	True	NM_080744,NM_007155	chr7,chr7	-,+	SRCRB4D,ZP3	10224,-1206
chr19:49150853-49151130	chr19	+	49150922	49151011	True	NM_001217,NR_004401	chr19,chr19	-,+	CA11,SEC1	-1471,-9677
chr22:39418980-39419279	chr22	+	39418985	39419085	True	NM_152426,NM_175709,NM_014508	chr22,chr22,chr22	+,-,+	APOBEC3D,CBX7,APOBEC3C	-1918,129503,-8771
chr7:124387174-124387426	chr7	+	124387229	124387355	True	NM_005302,NM_001174046	chr7,chr7	-,+	GPR37,SPAM1	18376,-821371
chr19:16681024-16681296	chr19	+	16681159	16681345	True	NM_024881,NM_032207	chr19,chr19	-,+	SLC35E1,C19orf44	1898,-74005
chrX:154237403-154237817	chrX	+	154237472	154237702	True	NM_023934,NM_000132	chrX,chrX	+,-	FUNDC2,F8	17361,13354
chr3:52276923-52278878	chr3	+	52277022	52278927	True	NM_001122870,NM_007284,NM_144641	chr3,chr3,chr3	+,-,+	PPM1M,TWF2,PPM1M	1258,-3839,881
chr6:150920594-150920925	chr6	+	150920593	150920948	True	NM_001029884,NM_024518	chr6,chr6	+,-	PLEKHG1,ULBP3	50,-530391
chrX:109561150-109561385	chrX	+	109561161	109561355	True	NM_020769,NM_015365,NM_001025580	chrX,chrX,chrX	+,-,-	RGAG1,AMMECR1,AMMECR1	100929,75,75
chr5:52283758-52284779	chr5	+	52283802	52284680	True	NM_002203,NM_004531	chr5,chr5	+,-	ITGA2,MOCS2	475,120702
chr14:75644586-75645564	chr14	+	75644735	75645441	True	NM_006827,NM_005252	chr14,chr14	-,+	TMED10,FOS	-1386,100039
chr17:79994189-79994492	chr17	+	79994284	79994478	True	NM_016286,NM_005052,NM_001195218	chr17,chr17,chr17	-,+,-	DCXR,RAC3,DCXR	1145,-4803,1145
chr4:2625194-2626164	chr4	+	2625201	2625905	True	NM_003704,NM_001161527	chr4,chr4	+,-	FAM193A,TNIP2	1253,131897
chr12:48917053-48919043	chr12	+	48917052	48918638	True	NM_001005203,NM_002289	chr12,chr12	+,-	OR8S1,LALBA	776,45242
chr1:150849962-150850190	chr1	+	150849962	150850095	True	NM_001197325,NM_001145415,NM_001668,NM_178427	chr1,chr1,chr1,chr1	-,+,-,-	ARNT,SETDB1,ARNT,ARNT	-718,48719,-718,-718
chr19:37065127-37065486	chr19	+	37065207	37065513	True	NM_020951,NM_032825	chr19,chr19	-,+	ZNF529,ZNF382	-1010,30707
chr18:51862907-51864387	chr18	+	51862909	51864425	True	NM_173529,NM_139171	chr18,chr18	+,-	C18orf54,STARD6	20745,16568
chr5:131345537-131346453	chr5	+	131345683	131346363	True	NM_001205247,NM_001205251,NM_001205250,NM_001205248,NM_000588,NM_015256,NM_001009185	chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,+,-,-	ACSL6,ACSL6,ACSL6,ACSL6,IL3,ACSL6,ACSL6	1044,1296,1450,1296,49983,1044,1044
chrX:134555755-134556048	chrX	+	134555946	134556024	True	NR_024359,NM_007131	chrX,chrX	+,-	NCRNA00086,ZNF75D	-129,-125981
chr13:31503218-31504350	chr13	+	31503221	31504321	True	NM_152325,NM_006644	chr13,chr13	+,-	C13orf26,HSPH1	2512,231846
chr1:174134581-174134930	chr1	+	174134580	174134707	True	NM_172071,NM_014857	chr1,chr1	-,+	RC3H1,RABGAP1L	-172370,-5998
chr4:113210697-113212095	chr4	+	113210704	113211922	True	NM_001102406,NM_052864,NM_025144	chr4,chr4,chr4	+,-,+	ALPK1,TIFA,ALPK1	6576,-3645,6576
chr9:40790140-40791038	chr9	+	40790232	40790853	True	NR_026801,NM_033160	chr9,chr9	+,-	FAM74A3,ZNF658	-74759,1314
chr9:40790140-40791038	chr9	+	39462642	39462692	False	NM_001040065,NR_003528	chr9,chr9	+,-	FAM75A2,LOC653501	-106994,1884
chr9:40790140-40791038	chr9	+	41607660	41607710	False	NM_001113541,NR_003528	chr9,chr9	+,-	FAM75A5,LOC653501	-107032,1884
chr1:40976829-40977709	chr1	+	40977245	40977489	True	NM_022774,NM_014747	chr1,chr1	+,-	DEM1,RIMS3	-2871,153893
chr8:104153360-104153561	chr8	+	104153409	104153575	True	NM_024812,NR_027071,NM_001024372	chr8,chr8,chr8	+,-,+	BAALC,C8orf56,BAALC	-539,45,-539
chr2:24807805-24809180	chr2	+	24807812	24808862	True	NM_147233,NM_147223,NM_001013663,NM_003743	chr2,chr2,chr2,chr2	+,+,-,+	NCOA1,NCOA1,C2orf79,NCOA1	-530,-530,207445,-530
chr2:27358682-27359849	chr2	+	27358688	27359758	True	NM_032604,NM_175769,NM_178553,NM_013388	chr2,chr2,chr2,chr2	+,+,-,-	ABHD1,TCF23,C2orf53,PREB	-12082,12186,2624,-1146
chr9:6761545-6762953	chr9	+	6761614	6762520	True	NM_000170,NM_015061,NM_001146695,NM_001146694	chr9,chr9,chr9,chr9	-,+,+,+	GLDC,KDM4C,KDM4C,KDM4C	-115922,-4024,-4024,-4024
chr5:148520774-148520991	chr5	+	148520879	148520969	True	NM_024577,NM_014945	chr5,chr5	-,+	SH3TC2,ABLIM3	-78142,84
chr22:30440139-30440564	chr22	+	30440138	30440598	True	NM_152510,NM_002309	chr22,chr22	+,-	HORMAD2,LIF	35854,202248
chrX:69357908-69358754	chrX	+	69358003	69358809	True	NM_001002254,NM_001551	chrX,chrX	-,+	AWAT2,IGBP1	-88215,-4743
chr2:240115354-240115702	chr2	+	240115545	240115681	True	NR_036229,NR_026664	chr2,chr2	+,-	MIR4269,MGC16025	111475,1522
chr19:48869021-48869569	chr19	+	48869139	48869457	True	NM_018273,NM_012451	chr19,chr19	-,+	TMEM143,SYNGR4	-1953,-1539
chr20:35922415-35923832	chr20	+	35922681	35923850	True	NM_022077,NM_021081,NM_001003897	chr20,chr20,chr20	+,-,+	MANBAL,GHRH,MANBAL	-4682,-37382,-4682
chr21:45993278-45993779	chr21	+	45993388	45993550	True	NM_198694,NM_198687	chr21,chr21	-,+	KRTAP10-5,KRTAP10-4	6981,55
chr6:36517606-36519308	chr6	+	36517794	36518953	True	NM_003017,NM_007271	chr6,chr6	+,-	SRSF3,STK38	43136,-2547
chr6:31116341-31117378	chr6_mcf_hap5	+	2498936	2499170	True	NM_007109,NM_001105563,NM_001105564,NM_001077511,NM_014069,NM_019052	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	+,-,-,+,-,-	TCF19,CCHCR1,CCHCR1,TCF19,PSORS1C2,CCHCR1	9089,8587,8587,9089,-9864,9036
chr21:45992179-45992487	chr21	+	45992270	45992366	True	NM_198694,NM_198687	chr21,chr21	-,+	KRTAP10-5,KRTAP10-4	8165,1239
chr9:139009619-139009877	chr9	+	139009679	139009750	True	NM_015597,NM_152833	chr9,chr9	+,-	GPSM1,C9orf69	212181,1032
chr1:201123508-201124286	chr1	+	201123709	201124024	True	NM_001164586,NM_016456	chr1,chr1	+,-	IGFN1,TMEM9	35928,-77
chr3:197477758-197478323	chr3	+	197477806	197478145	True	NM_032288,NM_001145642,NR_027840,NM_001011537	chr3,chr3,chr3,chr3	+,-,+,+	FYTTD1,KIAA0226,FYTTD1,FYTTD1	-1233,-1238,-596,-1433
chr9:131796422-131796650	chr9	+	131796425	131796681	True	NM_020145,NM_032809	chr9,chr9	-,+	SH3GLB2,FAM73B	-5846,2571
chr11:62456367-62458042	chr11	+	62456664	62457637	True	NM_203422,NM_012202,NM_001085372	chr11,chr11,chr11	-,+,+	LRRN4CL,GNG3,C11orf83	61,17476,-17589
chr12:57829239-57829921	chr12	+	57829413	57829526	True	NM_005538,NM_001080156	chr12,chr12	+,-	INHBC,ARHGAP9	-928,42253
chr2:220044852-220046459	chr2	+	220045213	220046487	True	NM_024293,NM_015680	chr2,chr2	+,-	FAM134A,CNPPD1	-2326,-3511
chr4:177240857-177241085	chr4	+	177240857	177241093	True	NM_021928,NM_080874	chr4,chr4	+,-	SPCS3,ASB5	2,-50484
chr10:43277615-43277881	chr10	+	43277807	43277885	True	NM_014753,NM_006955	chr10,chr10	+,-	BMS1,ZNF33B	68,-143815
chr1:156645214-156645976	chr1	+	156645366	156645962	True	NM_021948,NM_006617	chr1,chr1	+,-	BCAN,NES	-33677,1277
chr10:35436274-35437970	chr10	+	35436653	35438014	True	NM_001198777,NM_183012	chr10,chr10	-,+	CUL2,CREM	-57083,-10003
chr2:26217253-26217562	chr2	+	26217518	26217608	True	NM_002254,NM_016131	chr2,chr2	-,+	KIF3C,RAB10	-12075,39120
chr14:21946390-21947661	chr14	+	21946418	21947400	True	NM_032846,NM_001163380,NM_014828,NR_028074	chr14,chr14,chr14,chr14	-,-,+,-	RAB2B,RAB2B,TOX4,RAB2B	-1286,-1586,-1141,-1286
chr14:64856145-64857525	chr14	+	64856441	64856941	True	NM_005956,NR_033777	chr14,chr14	+,-	MTHFD1,TEX21P	-1745,-42112
chr7:123172428-123172778	chr7	+	123172443	123172720	True	NM_080928,NM_178827	chr7,chr7	+,-	ASB15,IQUB	76391,2048
chr7:123172428-123172778	chr2	-	203777534	203777811	False	NM_024744,NM_018256,NM_001104586	chr2,chr2,chr2	+,-,+	ALS2CR8,WDR12,ALS2CR8	-468,-585,-607
chr11:13298294-13298760	chr11	+	13298296	13298748	True	NM_001030273,NM_001030272,NM_001178,NM_032320	chr11,chr11,chr11,chr11	+,+,+,-	ARNTL,ARNTL,ARNTL,BTBD10	576,576,576,186140
chr17:4645278-4645667	chr17	+	4645295	4645679	True	NM_001100812,NM_032265,NM_022059,NM_001136046	chr17,chr17,chr17,chr17	-,+,-,+	CXCL16,ZMYND15,CXCL16,ZMYND15	-2072,-2009,-2072,-2027
chr7:132937100-132937432	chr7	+	132937166	132937446	True	NM_001037126,NM_021807,NM_017812	chr7,chr7,chr7	+,+,-	EXOC4,EXOC4,CHCHD3	376,376,-170338
chr3:126240927-126241172	chr3	+	126240970	126241166	True	NM_144639,NM_001165974,NM_152889	chr3,chr3,chr3	-,-,+	UROC1,UROC1,CHST13	-4354,-4354,2009
chr19:18047273-18048835	chr19	+	18047329	18048543	True	NM_001136203,NM_138442,NM_000215	chr19,chr19,chr19	+,+,-	CCDC124,CCDC124,JAK3	-3556,-1475,-88488
chr3:185433229-185434974	chr3	+	185433330	185434796	True	NM_001007225,NR_027317	chr3,chr3	-,+	IGF2BP2,C3orf65	108082,-2341
chr17:26903725-26903947	chr17	+	26903832	26903952	True	NM_003593,NM_005165,NM_033198	chr17,chr17,chr17	+,-,-	FOXN1,ALDOC,PIGS	-52924,49,-4945
chr4:11430093-11430348	chr4	+	11430197	11430287	True	NR_030298,NM_005114	chr4,chr4	+,-	MIR572,HS3ST1	-59797,300
chr9:46314251-46314741	chr9	+	46314308	46314439	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2683578,373126
chr9:46314251-46314741	chr9	+	67723214	67723345	False	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	70905,203415
chr9:46314251-46314741	chr9	-	45068761	45068892	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-78587,-1438031
chr9:46314251-46314741	chr9	-	45803510	45803641	False	NM_001145196,NR_024060	chr9,chr9	-,+	FAM75A6,FAM27A	-2172780,-76543
chr9:46314251-46314741	chr9	-	46189811	46189942	False	NM_001145196,NR_024060	chr9,chr9	-,+	FAM75A6,FAM27A	-2559081,-462844
chr2:101181205-101181827	chr2	+	101181218	101181504	True	NM_004854,NM_024065	chr2,chr2	-,+	CHST10,PDCL3	-147088,-1859
chr1:113461811-113463110	chr1	+	113462054	113462654	True	NR_002796,NM_001166496	chr1,chr1	+,-	AKR7A2P1,SLC16A1	3317,36081
chr2:38827178-38827432	chr2	+	38827182	38827391	True	NM_001142650,NM_138801,NM_138394	chr2,chr2,chr2	-,+,-	HNRPLL,GALM,HNRPLL	2842,65660,2842
chr10:120938641-120939059	chr10	+	120938675	120938938	True	NM_005308,NM_014098,NM_006793	chr10,chr10,chr10	+,-,-	GRK5,PRDX3,PRDX3	28258,-330,-330
chr17:41364260-41364461	chr17	+	41364382	41364506	True	NM_007300,NM_145041	chr17,chr17	-,+	BRCA1,TMEM106A	-86882,-539
chr4:47487411-47488967	chr4	+	47487421	47488633	True	NM_020453,NM_017845	chr4,chr4	+,-	ATP10D,COMMD8	-62,-21745
chr20:61990781-61990987	chr20	+	61990865	61991003	True	NM_020882,NM_000744	chr20,chr20	+,-	COL20A1,CHRNA4	-66378,1742
chr15:41805471-41805732	chr15	+	41805501	41805771	True	NM_002220,NM_206961,NM_002344,NM_001135685	chr15,chr15,chr15,chr15	+,-,-,-	ITPKA,LTK,LTK,LTK	-19430,364,364,364
chr19:51525942-51526408	chr19	+	51525964	51526106	True	NM_002776,NM_001136032,NM_145888,NM_001077500,NM_001167605,NM_006853,NM_144947,NM_014441	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,+	KLK10,KLK11,KLK10,KLK10,KLK11,KLK11,KLK11,SIGLEC9	-2682,3816,-3010,-2533,5234,5234,4829,102030
chr16:56672527-56673726	chr16	+	56672667	56673635	True	NR_003658,NR_036677,NM_176870,NM_005946,NM_005950,NR_027781	chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,-,+	MT1DP,MT1JP,MT1M,MT1A,MT1G,MT1DP	4080,-3067,-6184,-140,28392,3963
chr21:42798541-42798811	chr21	+	42798572	42798666	True	NM_002462,NM_001135099,NM_001178046,NM_001144925	chr21,chr21,chr21,chr21	+,-,+,+	MX1,TMPRSS2,MX1,MX1	-645,81376,-520,-6103
chr2:27255246-27255656	chr2	+	27255567	27255645	True	NM_001083590,NM_017727,NM_001134693	chr2,chr2,chr2	+,+,-	TMEM214,TMEM214,OST4	128,128,38972
chr17:56405310-56405902	chr17	+	56405375	56405863	True	NM_024418,NM_004758,NR_027647,NR_029683	chr17,chr17,chr17,chr17	-,-,+,-	BZRAP1,BZRAP1,LPO,MIR142	339,339,-89639,2866
chr11:61685376-61686629	chr11	+	61685468	61686534	True	NM_013401,NM_001139443	chr11,chr11	-,+	RAB3IL1,BEST1	-471,30821
chr15:81289019-81289385	chr15	+	81289062	81289139	True	NM_022566,NM_015154	chr15,chr15	+,-	MESDC1,MESDC2	4155,-6857
chr1:203022916-203023246	chr1	+	203022929	203023218	True	NM_015053,NM_002479	chr1,chr1	+,-	PPFIA4,MYOG	-2669,32209
chr14:81868602-81868875	chr14	+	81868707	81868860	True	NM_033104,NM_000369	chr14,chr14	-,+	STON2,TSHR	-3780,-446889
chr2:85890541-85890814	chr2	+	85890551	85890843	True	NM_000542,NM_198843,NM_006433	chr2,chr2,chr2	-,-,+	SFTPB,SFTPB,GNLY	5071,5071,30570
chr22:38795268-38795573	chr22	+	38795357	38795577	True	NM_016657,NR_002821	chr22,chr22	+,-	KDELR3,LOC400927	68505,-426
chr7:114053892-114055383	chr7	+	114054038	114055240	True	NM_014491,NM_001172766,NM_148900,NM_002711,NR_033767,NM_148898	chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,-,+,+	FOXP2,FOXP2,FOXP2,PPP1R3A,FOXP2,FOXP2	-105,-105,-105,-494956,-105,-105
chr11:105947255-105948023	chr11	+	105947273	105947598	True	NM_198439,NM_015423,NM_152433	chr11,chr11,chr11	-,+,-	KBTBD3,AASDHPPT,KBTBD3	918,693,918
chr19:49525725-49526174	chr19	+	49525922	49526002	True	NM_000894,NM_000737,NM_033378,NR_024244	chr19,chr19,chr19,chr19	-,-,+,-	LHB,CGB,CGB2,SNAR-G2	-5575,1645,9127,9096
chr19:49525725-49526174	chr19	+	49563876	49563926	False	NM_006179,NM_033043,NM_033142	chr19,chr19,chr19	-,+,-	NTF4,CGB5,CGB7	3248,-16825,-4879
chr9:39743622-39745073	chr9	+	39743701	39745116	True	NR_003528,NM_001085452	chr9,chr9	-,+	LOC653501,FAM75A1	-279175,139858
chr9:39743622-39745073	chr9	+	39214499	39215914	False	NM_033655,NM_001085452	chr9,chr9	-,+	CNTNAP3,FAM75A1	72436,139784
chr9:86322067-86322298	chr9	+	86322166	86322308	True	NM_053067,NM_013438,NM_001190727	chr9,chr9,chr9	-,-,+	UBQLN1,UBQLN1,C9orf103	910,910,-84184
chr14:100838245-100838736	chr14	+	100838583	100838770	True	NM_001161476,NM_173701,NM_024515,NM_004184,NM_213646,NM_213645	chr14,chr14,chr14,chr14,chr14,chr14	+,-,+,-,-,-	WDR25,WARS,WDR25,WARS,WARS,WARS	3984,3960,4062,3207,3207,3960
chr16:83988761-83989012	chr16	+	83988797	83988919	True	NM_013370,NM_001080442,NM_182981,NM_182980	chr16,chr16,chr16,chr16	+,-,+,+	OSGIN1,SLC38A8,OSGIN1,OSGIN1	-6176,86893,-2021,-6176
chr5:180018993-180019345	chr5	+	180019033	180019293	True	NM_052863,NM_015455	chr5,chr5	-,+	SCGB3A1,CNOT6	-546,-97667
chr17:36604483-36605123	chr17	+	36604495	36604814	True	NM_001004334,NM_001199417	chr17,chr17	-,+	GPR179,ARHGAP23	-104802,-19826
chr16:48278372-48278578	chr16	+	48278374	48278478	True	NM_032583,NM_145186,NM_031490	chr16,chr16,chr16	-,-,+	ABCC11,ABCC11,LONP2	-9286,-9286,-214
chr19:48965495-48965701	chr19	+	48965539	48965673	True	NM_013348,NM_017457,NM_004228,NM_001080434,NM_170720	chr19,chr19,chr19,chr19,chr19	+,+,+,-,+	KCNJ14,CYTH2,CYTH2,LMTK3,KCNJ14	-6824,6791,6791,50823,-1084
chr1:160305993-160307229	chr1	+	160306187	160307147	True	NM_004371,NM_015331,NM_001098398	chr1,chr1,chr1	-,+,-	COPA,NCSTN,COPA	6273,5915,6273
chr9:116265704-116266121	chr9	+	116265728	116266144	True	NM_017443,NM_130795	chr9,chr9	-,+	POLE3,RGS3	-92699,-2072
chr20:1517816-1518313	chr20	+	1517965	1518273	True	NM_014723,NM_178460	chr20,chr20	+,-	SNPH,SIRPD	-271063,20120
chr8:29600098-29600771	chr8	+	29600122	29600797	True	NR_026765,NR_024473	chr8,chr8	-,+	C8orf75,LOC286135	4878,178231
chrY:19691759-19692106	chrY	+	19691824	19692146	True	NR_028084,NR_002161,NR_002160	chrY,chrY,chrY	+,-,-	FAM41AY2,NCRNA00230A,NCRNA00230B	-79037,-471,-492
chrY:19691759-19692106	chrY	-	20487626	20487948	False	NR_028083,NR_002161,NR_002160	chrY,chrY,chrY	-,+,+	FAM41AY1,NCRNA00230A,NCRNA00230B	79034,470,491
chr9:74526622-74527380	chr9	+	74526718	74527380	True	NM_001025780,NM_182505,NM_016014	chr9,chr9,chr9	-,+,-	FAM108B1,C9orf85,FAM108B1	-570,-347,-570
chr11:67810185-67810467	chr11	+	67810184	67810434	True	NM_030930,NM_006019,NM_006053	chr11,chr11,chr11	-,+,+	UNC93B1,TCIRG1,TCIRG1	-38591,-3773,12
chr4:186995488-186996641	chr4	+	186995574	186996431	True	NM_021069,NM_003265	chr4,chr4	-,+	SORBS2,TLR3	-117704,-5317
chr17:25321735-25322434	chr17	+	25321819	25322325	True	NM_015626,NM_000625	chr17,chr17	+,-	WSB1,NOS2	298780,805280
chr17:25321735-25322434	chr17	+	21340589	21340640	False	NM_001113434,NM_001194958	chr17,chr17	-,+	C17orf51,KCNJ18	114352,-32193
chr16:10914958-10915653	chr16	+	10915014	10915652	True	NM_000246,NM_001079512	chr16,chr16	+,-	CIITA,FAM18A	55402,-2393
chr1:29555224-29555873	chr1	+	29555253	29555665	True	NM_016011,NM_133177,NM_133178,NM_001195001,NM_001024732,NM_005704	chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,+,-,+	MECR,PTPRU,PTPRU,PTPRU,MECR,PTPRU	1839,7362,7362,7362,1839,7362
chr5:140071315-140072197	chr5	+	140071394	140072005	True	NM_012208,NM_002109,NM_144723	chr5,chr5,chr5	+,-,+	HARS2,HARS,ZMAT2	-427,-423,8026
chr15:91449910-91450149	chr15	+	91450003	91450129	True	NM_006122,NM_198527	chr15,chr15	+,-	MAN2A2,HDDC3	-2634,25695
chr22:48413040-48413256	chr22	+	48413076	48413149	True	NR_033377,NR_036172	chr22,chr22	-,+	FLJ46257,MIR3201	-385758,257026
chr7:26679970-26680175	chr7	+	26679977	26680192	True	NR_022006,NM_001145531	chr7,chr7	-,+	KIAA0087,C7orf71	-101533,-2538
chr13:96345165-96346356	chr13	+	96345500	96346308	True	NM_006260,NM_198968	chr13,chr13	+,-	DNAJC3,DZIP1	-16165,-48543
chr6:11381172-11382202	chr6	+	11381197	11382086	True	NM_001142393,NM_001100829	chr6,chr6	-,+	NEDD9,TMEM170B	546,156424
chr16:21610033-21610398	chr16	+	21610058	21610440	True	NM_001077180,NM_016025,NM_005849	chr16,chr16,chr16	+,+,-	METTL9,METTL9,IGSF6	415,415,53582
chr22:24057356-24058032	chr22	+	24057491	24057825	True	NR_024448,NM_153615	chr22,chr22	-,+	LOC91316,RGL4	1835,-24494
chr19:7659540-7659824	chr19	+	7659696	7659804	True	NM_020196,NM_020902,NM_001080429	chr19,chr19,chr19	-,+,+	XAB2,KIAA1543,KIAA1543	34685,983,983
chr1:6526195-6526713	chr1	+	6526339	6526523	True	NM_148967,NM_001039664,NM_003790,NM_031475,NM_148970,NM_148966,NM_148965	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,-,-	TNFRSF25,TNFRSF25,TNFRSF25,ESPN,TNFRSF25,TNFRSF25,TNFRSF25	-84,-84,-84,-41542,-84,-84,-84
chr12:64800307-64800989	chr12	+	64800484	64800962	True	NM_001170633,NM_007235	chr12,chr12	-,+	C12orf56,XPOT	-16139,-2387
chrY:25365936-25366177	chrY	+	25365935	25366177	True	NM_020364,NM_020420,NM_001005786,NM_001005785,NM_020363	chrY,chrY,chrY,chrY,chrY	+,+,+,+,+	DAZ3,DAZ4,DAZ2,DAZ2,DAZ2	-405,-405,-382,-382,-382
chrY:25365936-25366177	chrY	-	25344657	25344899	False	NM_020364,NM_020420,NM_001005375,NM_004081	chrY,chrY,chrY,chrY	+,-,-,-	DAZ3,DAZ4,DAZ4,DAZ1	20681,405,405,390
chrY:25365936-25366177	chrY	-	26959042	26959284	False	NM_020364,NM_001005375,NM_020420	chrY,chrY,chrY	-,+,-	DAZ3,DAZ4,DAZ4	405,20682,405
chrY:25365936-25366177	chrY	+	26980321	26980563	False	NM_020364,NM_020420,NM_001005375,NM_001005786,NM_001005785	chrY,chrY,chrY,chrY,chrY	+,+,+,+,+	DAZ3,DAZ4,DAZ4,DAZ2,DAZ2	-405,-405,-405,-382,-382
chr3:127777671-127778606	chr3	+	127777909	127778647	True	NM_013336,NM_003707	chr3,chr3	+,-	SEC61A1,RUVBL1	-6748,64074
chr3:127777671-127778606	chr3	-	127782051	127782101	False	NM_013336,NM_003707	chr3,chr3	+,-	SEC61A1,RUVBL1	-10890,60620
chr7:117194870-117196209	chr7	+	117194869	117196007	True	NR_023315,NM_000492	chr7,chr7	-,+	ASZ1,CFTR	-127292,-74911
chr1:51986663-51987099	chr1	+	51986682	51987134	True	NM_001981,NM_024586	chr1,chr1	-,+	EPS15,OSBPL9	-1687,95411
chr16:58016653-58017938	chr16	+	58016947	58017437	True	NM_199456,NM_199046,NM_001135639	chr16,chr16,chr16	+,+,-	TEPP,TEPP,CNGB1	-6671,-6671,-11927
chr10:95229705-95231500	chr10	+	95230076	95231292	True	NM_001127182,NM_013451	chr10,chr10	+,-	CEP55,MYOF	25076,10832
chr11:33894941-33896843	chr11	+	33895046	33896733	True	NM_001142316,NM_203364,NM_001142315	chr11,chr11,chr11	-,+,-	LMO2,CAPRIN1,LMO2	-3675,176496,-3537
chr16:10519470-10520329	chr16	+	10519850	10520369	True	NM_024997,NM_001424	chr16,chr16	+,-	ATF7IP2,EMP2	2355,154223
chr15:32938309-32940192	chr15	+	32938443	32940081	True	NM_003020,NR_036650,NM_001144757	chr15,chr15,chr15	+,-,+	SCG5,LOC100288615,SCG5	-4625,-112501,-4625
chr2:84809023-84809616	chr2	+	84809024	84809529	True	NM_003849,NM_001370	chr2,chr2	-,+	SUCLG1,DNAH6	-122438,-65497
chr17:61997253-61997642	chr17	+	61997414	61997650	True	NM_001318,NM_022579,NM_022581,NM_000515,NM_022560,NM_022561,NM_022562,NM_022580,NR_002947,NM_022559	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,-,-,-,+,-	CSHL1,CSHL1,CSHL1,GH1,GH1,GH1,GH1,CSHL1,TCAM1P,GH1	-8796,-8796,-8796,-1216,-1216,-1216,-1216,-8796,-63089,-1216
chr20:61884674-61885007	chr20	+	61884695	61884957	True	NM_152864,NR_024389	chr20,chr20	-,+	NKAIN4,FLJ16779	985,372
chr12:102497894-102499022	chr12	+	102497916	102498952	True	NM_017915,NM_024057	chr12,chr12	+,-	C12orf48,NUP37	15003,13461
chr10:73533412-73533889	chr10	+	73533429	73533773	True	NM_022153,NM_001171933	chr10,chr10	-,+	C10orf54,CDH23	-92,21754
chrX:33133919-33134347	chrX	+	33133918	33134048	True	NM_004010,NM_152631	chrX,chrX	-,+	DMD,FAM47B	12546,1826864
chr11:18718057-18719995	chr11	+	18718104	18719962	True	NM_153347,NM_173588	chr11,chr11	+,-	TMEM86A,IGSF22	388,27865
chr9:19778679-19779982	chr9	+	19778724	19779607	True	NM_001193288,NM_020344,NM_001010887	chr9,chr9,chr9	-,-,+	SLC24A2,SLC24A2,ACER2	9048,9048,-369850
chr9:88564368-88565771	chr9	+	88564650	88565509	True	NM_024635,NM_016548	chr9,chr9	+,-	NAA35,GOLM1	-8651,149057
chr5:140810-141498	chr5	+	141373	141467	True	NM_052909,NM_145265	chr5,chr5	+,-	PLEKHG4B,CCDC127	-1058,76880
chr10:134122568-134123254	chr10	+	134122690	134123064	True	NM_001143758,NM_173575	chr10,chr10	+,-	LRRC27,STK32C	22549,-1213
chrX:19141249-19141515	chrX	+	19141322	19141492	True	NM_001079858,NM_001079859,NM_001079860,NM_001184835,NM_001184834,NM_001184837,NM_001184836,NM_001184833,NM_000284,NM_005756	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,-,-,-,+,-	GPR64,GPR64,GPR64,GPR64,GPR64,GPR64,GPR64,GPR64,PDHA1,GPR64	-567,-567,-567,-567,-567,-567,-567,-567,220518,-567
chr1:45964854-45965209	chr1	+	45964898	45965254	True	NM_007170,NR_033297,NR_033296,NR_033298,NM_015506	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	TESK2,CCDC163P,CCDC163P,CCDC163P,MMACHC	-8058,547,547,547,601
chr1:36550216-36550432	chr1	+	36550291	36550465	True	NM_017825,NM_005202,NM_014466	chr1,chr1,chr1	+,-,+	ADPRHL2,COL8A2,TEKT2	3987,15435,-668
chr17:37711420-37711774	chr17	+	37711533	37711761	True	NM_032192,NM_006160	chr17,chr17	+,-	PPP1R1B,NEUROD2	71417,52464
chr2:78182148-78183302	chr2	+	78182316	78183329	True	NR_024342,NM_198448	chr2,chr2	-,+	SNAR-H,REG3G	-164,1069496
chr20:61437136-61438008	chr20	+	61437217	61437981	True	NM_007346,NM_018270,NM_006602	chr20,chr20,chr20	+,+,-	OGFR,C20orf20,TCFL5	-1091,-9463,55184
chr2:177134989-177135391	chr2	+	177135113	177135436	True	NR_033979,NM_006554,NR_027850	chr2,chr2,chr2	-,+,+	LOC401022,MTX2,MTX2	-81427,-1050,-1050
chrX:48980186-48981161	chrX	+	48980214	48980739	True	NM_001099681,NM_015698	chrX,chrX	+,-	MAGIX,GPKOW	38441,-135
chr8:55015801-55016012	chr8	+	55015821	55016010	True	NM_014175,NM_006330	chr8,chr8	+,-	MRPL15,LYPLA1	31770,-1244
chr4:65221374-65221919	chr4	+	65221557	65221935	True	NR_034138,NM_001010874	chr4,chr4	+,-	LOC100144602,TECRL	1313743,53293
chr1:214726300-214727132	chr1	+	214726520	214727144	True	NM_016343,NM_005401	chr1,chr1	+,-	CENPF,PTPN14	49387,-1496
chr11:63686423-63686835	chr11	+	63686447	63686884	True	NM_024771,NM_173587	chr11,chr11	+,-	NAA40,RCOR2	19557,-2131
chr10:128591599-128592417	chr10	+	128591616	128592268	True	NM_001004298,NM_001380	chr10,chr10	-,+	C10orf90,DOCK1	-381606,1754
chr2:23606645-23606846	chr2	+	23606646	23606886	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	543098,1411
chr4:16903563-16903995	chr4	+	16903620	16903810	True	NM_001130834,NM_001079827,NM_001290	chr4,chr4,chr4	-,+,-	LDB2,CLRN2,LDB2	-3196,612977,-3196
chr8:139925089-139925850	chr8	+	139925113	139925710	True	NM_017444,NM_152888	chr8,chr8	+,-	CHRAC1,COL22A1	1595690,576
chr2:11273348-11273555	chr2	+	11273354	11273418	True	NM_182500,NM_004850	chr2,chr2	+,-	C2orf50,ROCK2	-226,211343
chr14:56603010-56604830	chr14	+	56603387	56604531	True	NR_026797,NM_021255	chr14,chr14	-,+	C14orf34,PELI2	-339995,-18345
chr3:183416259-183416775	chr3	+	183416478	183416814	True	NM_024871,NM_018023	chr3,chr3	-,+	MAP6D1,YEATS2	126629,-930
chr19:54724661-54724875	chr19	+	54724660	54724724	True	NM_001013,NM_001081450,NM_006864	chr19,chr19,chr19	+,-,-	RPS9,LILRB3,LILRB3	-19985,2285,2285
chr19:54724661-54724875	chr19	+	54744412	54744476	False	NM_001013,NM_024318	chr19,chr19	+,-	RPS9,LILRA6	-39737,2298
chr11:3549257-3550486	chr11	+	3549428	3550040	True	NM_053017,NR_002720	chr11,chr11	-,+	ART5,TRPC2	113499,97673
chrX:49092461-49092833	chrX	+	49092480	49092562	True	NM_005183,NM_014008	chrX,chrX	-,+	CACNA1F,CCDC22	-2647,-604
chr20:3777481-3777682	chr20	+	3777574	3777704	True	NM_021873,NM_021872,NM_001810,NM_004358	chr20,chr20,chr20,chr20	+,+,-,+	CDC25B,CDC25B,CENPB,CDC25B	-1224,-1224,-10237,-1224
chr12:121021699-121022042	chr12	+	121021703	121021861	True	NM_014868,NM_015918,NM_198202	chr12,chr12,chr12	+,-,-	RNF10,POP5,POP5	-49622,-2506,-2502
chr9:46304541-46305930	chr9	+	46305281	46305629	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2674551,381936
chr9:46304541-46305930	chr9	+	67714205	67714553	False	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	79686,212207
chr9:46304541-46305930	chr9	-	45077563	45077909	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-87378,-1446833
chr9:46304541-46305930	chr9	-	46198906	46198956	False	NM_001145196,NR_024060	chr9,chr9	-,+	FAM75A6,FAM27A	-2568176,-471928
chr9:46304541-46305930	chr9	-	45812307	45812653	False	NM_001145196,NR_024060	chr9,chr9	-,+	FAM75A6,FAM27A	-2181577,-85329
chr3:195269055-195269598	chr3	+	195269117	195269585	True	NR_003265,NM_006241	chr3,chr3	+,-	SDHAP2,PPP1R2	115324,689
chrX:119032727-119033430	chrX	+	119032799	119033413	True	NM_178813,NM_006978,NM_001008535,NM_001008534	chrX,chrX,chrX,chrX	+,-,+,+	AKAP14,RNF113A,AKAP14,AKAP14	-2914,-27008,-2914,-2914
chr11:128561440-128561945	chr11	+	128561536	128561982	True	NM_001167681,NM_002017,NM_001143820	chr11,chr11,chr11	+,+,-	FLI1,FLI1,ETS1	1828,1830,-104083
chr12:122517372-122517877	chr12	+	122517432	122517918	True	NM_014938,NM_001014336	chr12,chr12	+,-	MLXIP,IL31	-723,140878
chr16:1201918-1202426	chr16	+	1202000	1202092	True	NM_021098,NM_207419,NM_001005407	chr16,chr16,chr16	+,-,+	CACNA1H,C1QTNF8,CACNA1H	1148,-55756,1148
chr19:49242035-49242299	chr19	+	49242035	49242347	True	NM_019113,NM_017805,NM_182575	chr19,chr19,chr19	+,-,-	FGF21,RASIP1,IZUMO1	16996,1673,7869
chr11:67196221-67197406	chr11	+	67196280	67197231	True	NM_005608,NM_003952	chr11,chr11	-,+	PTPRCAP,RPS6KB2	7985,-396
chr11:73298391-73299724	chr11	+	73298549	73299462	True	NM_001130033,NM_015159	chr11,chr11	+,-	PLEKHB1,FAM168A	57760,9823
chr11:93475052-93475382	chr11	+	93475149	93475414	True	NR_003026,NR_002920,NM_024116,NR_031639,NR_002973,NM_014039,NR_002959,NR_003033	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,-,+,-,-	SNORA1,SNORA8,TAF1D,MIR1304,SNORA40,C11orf54,SNORA18,SNORD5	-9850,-9484,-446,-8219,-6747,-407,-8386,-8683
chr4:93225973-93226243	chr4	+	93226050	93226134	True	NM_183049,NM_001510	chr4,chr4	-,+	TMSL3,GRID2	-1465781,-551
chr2:149398340-149399497	chr2	+	149398509	149399520	True	NM_181742,NM_015630	chr2,chr2	-,+	ORC4,EPC2	-619336,3039
chr12:52981566-52982634	chr12	+	52981644	52982188	True	NM_002284,NM_001146225	chr12,chr12	+,-	KRT86,KRT72	-286046,13190
chr1:92348274-92349799	chr1	+	92348421	92349566	True	NM_207189,NM_003243,NR_036634,NM_001195683	chr1,chr1,chr1,chr1	+,-,-,-	BRDT,TGFBR3,TGFBR3,TGFBR3	65361,2328,2328,2328
chrX:152678963-152680100	chrX	+	152679189	152679771	True	NM_001136273,NM_080701	chrX,chrX	+,-	ZFP92,TREX2	4009,32232
chr2:233404711-233405398	chr2	+	233404711	233405421	True	NM_005199,NM_004846,NM_145702	chr2,chr2,chr2	+,+,-	CHRNG,EIF4E2,TIGD1	-325,9935,9855
chr6:52697586-52698354	chr6	+	52697669	52698379	True	NM_014051,NM_153699	chr6,chr6	+,-	TMEM14A,GSTA5	-161836,12564
chr22:24647503-24647793	chr22	+	24647505	24647567	True	NM_001099782,NM_001099781,NM_004121,NR_003714	chr22,chr22,chr22,chr22	-,-,-,+	GGT5,GGT5,GGT5,POM121L9P	-6395,-6395,-6395,21
chr22:24647503-24647793	chr22	-	25055135	25055197	False	NR_024593,NR_024494	chr22,chr22	-,+	POM121L10P,BCRP3	-21,-26304
chr7:47693874-47694864	chr7	+	47694200	47694881	True	NM_022748,NM_001123065	chr7,chr7	-,+	TNS3,C7orf65	-72458,-40
chr11:128740516-128741530	chr11	+	128740558	128741416	True	NM_153765,NM_153764,NM_153767,NM_153766,NM_000890	chr11,chr11,chr11,chr11,chr11	-,-,-,-,+	KCNJ1,KCNJ1,KCNJ1,KCNJ1,KCNJ5	-3290,-3290,-3290,-3290,19896
chr12:56505865-56506348	chr12	+	56506029	56506269	True	NM_032786,NM_001035267,NM_001130420,NM_006191,NM_021104	chr12,chr12,chr12,chr12,chr12	+,+,-,+,+	ZC3H10,RPL41,SMARCC2,PA2G4,RPL41	5760,4104,77134,-7978,4104
chr7:72352020-72353899	chr7	+	72352619	72353458	True	NR_003666,NM_172020	chr7,chr7	-,+	SPDYE7P,POM121	-12964,-2734
chr7:72352020-72353899	chr7	+	102007645	102007859	False	NM_024653,NM_001146210	chr7,chr7	+,-	PRKRIP1,SPDYE6	28944,-10756
chr7:72352020-72353899	chr7	-	75112293	75112350	False	NM_001099415,NM_001099435	chr7,chr7	-,+	POM121C,SPDYE5	3275,11948
chr7:72352020-72353899	chr7	+	76181962	76182019	False	NR_029411,NM_012230	chr7,chr7	+,-	LOC100133091,POMZP3	-3362,74658
chr1:27240296-27240667	chr1	+	27240412	27240682	True	NM_021969,NM_006600	chr1,chr1	-,+	NR0B2,NUDC	-65,7541
chr6:159068053-159069297	chr6	+	159068160	159068992	True	NM_006519,NM_001009991	chr6,chr6	-,+	DYNLT1,SYTL3	-2356,2053
chr8:27491653-27492129	chr8	+	27491849	27492079	True	NM_016240,NM_001831,NM_182826	chr8,chr8,chr8	+,-,+	SCARA3,CLU,SCARA3	-323,-19522,-323
chr7:117056642-117058428	chr7	+	117056933	117058360	True	NR_023315,NM_000492,NM_130768	chr7,chr7,chr7	-,+,-	ASZ1,CFTR,ASZ1	9275,61656,9275
chr8:70747061-70747309	chr8	+	70747060	70747322	True	NM_001128206,NM_001146008,NM_030958,NM_001146009	chr8,chr8,chr8,chr8	+,-,-,-	SULF1,SLCO5A1,SLCO5A1,SLCO5A1	-342083,-1435,27,-1656
chr3:122786594-122786893	chr3	+	122786650	122786846	True	NR_028444,NM_006810,NM_001031702	chr3,chr3,chr3	+,+,-	PDIA5,PDIA5,SEMA5B	-845,-845,-40074
chr14:56265627-56267076	chr14	+	56265713	56267084	True	NR_026796,NR_026797,NR_004844	chr14,chr14,chr14	-,-,+	C14orf34,C14orf34,RPL13AP3	-2321,-2321,-32814
chr7:139873018-139873683	chr7	+	139873052	139873693	True	NM_030647,NR_024451	chr7,chr7	-,+	JHDM1D,LOC100134229	3100,3367
chr3:39320505-39322267	chr3	+	39320929	39322099	True	NM_001171171,NM_001171172,NM_005201,NM_001171174,NM_001337	chr3,chr3,chr3,chr3,chr3	-,-,+,-,-	CX3CR1,CX3CR1,CCR8,CX3CR1,CX3CR1	715,-17,49097,1177,-28
chr1:152777808-152779075	chr1	+	152777950	152778994	True	NM_178352,NM_178351,NM_178349	chr1,chr1,chr1	+,-,+	LCE1D,LCE1C,LCE1B	-8774,163,5452
chr9:79397052-79398897	chr9	+	79397142	79398924	True	NR_015342,NM_015225	chr9,chr9	+,-	PCA3,PRUNE2	-17840,122129
chr11:68609534-68610196	chr11	+	68609584	68610142	True	NM_001031847,NM_002180,NM_001876	chr11,chr11,chr11	-,+,-	CPT1A,IGHMBP2,CPT1A	-185,61176,-185
chr7:23570156-23570861	chr7	+	23570187	23570875	True	NM_013293,NR_026676	chr7,chr7	-,+	TRA2A,RPS2P32	831,-40237
chr7:128209985-128210479	chr7	+	128210182	128210453	True	NM_183243,NR_024368	chr7,chr7	-,+	IMPDH1,FLJ45340	-160146,70841
chrX:8138650-8139074	chrX	+	8138824	8139074	True	NR_030380,NM_016378	chrX,chrX	+,-	MIR651,VCX2	-43869,284
chrX:8138650-8139074	chrX	-	7810855	7810911	False	NM_013452,NM_004650	chrX,chrX	+,-	VCX,PNPLA4	-603,84614
chrX:8138650-8139074	chrX	-	8433104	8433351	False	NM_001001888,NM_000216	chrX,chrX	+,-	VCX3B,KAL1	-284,266926
chr9:124990669-124990869	chr9	+	124990669	124990766	True	NM_199160,NM_001173512,NM_014368	chr9,chr9,chr9	-,+,-	LHX6,MRRF,LHX6	304,36115,304
chr10:51562816-51564342	chr10	+	51563246	51564230	True	NM_005437,NM_006327,NM_001145263,NM_001145261,NM_001145260	chr10,chr10,chr10,chr10,chr10	+,-,+,+,+	NCOA4,TIMM23,NCOA4,NCOA4,NCOA4	8133,59164,877,877,877
chr1:26672306-26672578	chr1	+	26672411	26672611	True	NM_001039775,NM_001803	chr1,chr1	-,+	AIM1L,CD52	8060,-28051
chr20:21106030-21106508	chr20	+	21106042	21106434	True	NM_033176,NM_001163023,NM_001163022,NM_018474	chr20,chr20,chr20,chr20	-,+,+,+	NKX2-4,PLK1S1,PLK1S1,PLK1S1	271663,189,189,189
chr12:25805786-25806839	chr12	+	25805890	25806816	True	NM_001164748,NM_001145727	chr12,chr12	+,-	RASSF8,IFLTD1	305147,-4402
chr1:171450885-171452560	chr1	+	171451088	171452576	True	NM_000261,NM_015172	chr1,chr1	-,+	MYOC,PRRC2C	169247,2089
chr12:110012657-110012990	chr12	+	110012662	110012963	True	NM_001114185,NM_000431,NM_052845	chr12,chr12,chr12	+,+,-	MVK,MVK,MMAB	-1213,-1213,-1304
chr4:6697499-6697965	chr4	+	6697589	6697941	True	NM_005980,NM_203462	chr4,chr4	+,-	S100P,MRFAP1L1	-2074,13715
chr3:135682599-135684443	chr3	+	135682842	135684310	True	NM_002718,NM_001145417,NM_001190447	chr3,chr3,chr3	+,-,+	PPP2R3A,MSL2,PPP2R3A	204,229050,204
chr15:93113047-93113966	chr15	+	93113046	93113962	True	NR_021493,NM_153040	chr15,chr15	-,+	LOC100144604,C15orf32	1581,-98192
chr16:2689844-2690123	chr16	+	2689875	2690064	True	NR_024492,NM_031948	chr16,chr16	+,-	FLJ42627,PRSS27	-943,80539
chr16:2689844-2690123	chr16	-	2610129	2610318	False	NR_036139,NM_031268	chr16,chr16	-,+	MIR3178,PDPK1	-28123,-22211
chr2:219540757-219541530	chr2	+	219540764	219541134	True	NM_022453,NM_015690	chr2,chr2	-,+	RNF25,STK36	-3983,-4053
chr17:71090167-71090784	chr17	+	71090167	71090635	True	NM_001159770,NM_139177,NM_001050	chr17,chr17,chr17	-,-,+	SLC39A11,SLC39A11,SSTR2	-1314,-1314,70524
chr5:75023954-75024553	chr5	+	75023953	75024591	True	NM_016218,NM_001099271	chr5,chr5	+,-	POLK,POC5	-216347,-10640
chr8:124549271-124549917	chr8	+	124549498	124549966	True	NM_148177,NM_018024,NM_058229	chr8,chr8,chr8	-,+,-	FBXO32,WDYHV1,FBXO32	-5115,-120594,3530
chr1:147484207-147484607	chr1	+	147484208	147484488	True	NR_003377,NM_001097616	chr1,chr1	-,+	PDZK1P1,GPR89C	-9,-58692
chr1:147484207-147484607	chr1	+	145942496	145942708	False	NR_003377,NM_001097616	chr1,chr1	-,+	PDZK1P1,GPR89C	-9,-58679
chr15:92935854-92936362	chr15	+	92936012	92936342	True	NM_006011,NR_021493	chr15,chr15	+,-	ST8SIA2,LOC100144604	797,179201
chr17:76247597-76247916	chr17	+	76247613	76247895	True	NR_002219,NM_001204210	chr17,chr17	-,+	EPR1,TMEM235	-26830,-20273
chr7:138797282-138798404	chr7	+	138797656	138798270	True	NM_024625,NM_001144920,NM_020119	chr7,chr7,chr7	-,+,-	ZC3HAV1,TTC26,ZC3HAV1	-3191,20219,-3191
chr3:44913751-44915306	chr3	+	44913953	44914923	True	NM_003241,NM_001135179	chr3,chr3	+,-	TGM4,ZDHHC3	1174,102801
chr3:138452642-138453637	chr3	+	138452760	138453569	True	NM_018147,NM_006219	chr3,chr3	+,-	FAIM,PIK3CB	-124892,24679
chr6:99835894-99837158	chr6	+	99836829	99836975	True	NM_017421,NM_001195131	chr6,chr6	-,+	COQ3,LOC100130890	5165,131894
chr12:80070437-80070957	chr12	+	80070451	80070970	True	NR_031700,NM_002583	chr12,chr12	+,-	MIR1252,PAWR	-257466,13881
chrX:107228842-107229480	chrX	+	107228847	107229223	True	NM_001170553,NM_031273	chrX,chrX	+,-	VSIG1,TEX13B	58976,-3247
chr21:44313264-44313477	chr21	+	44313376	44313452	True	NM_018669,NM_021075,NM_001001503	chr21,chr21,chr21	-,+,+	WDR4,NDUFV3,NDUFV3	-13698,-49,-49
chr6:38670804-38671578	chr6	+	38670839	38671395	True	NM_006708,NM_001371	chr6,chr6	-,+	GLO1,DNAH8	1,19156
chr20:36153223-36154768	chr20	+	36153367	36154426	True	NM_005386,NM_001167821,NM_001167820,NM_001167823,NM_001167822,NM_006698,NM_181689	chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,-,-,-,-,-,+	NNAT,BLCAP,BLCAP,BLCAP,BLCAP,BLCAP,NNAT	-3811,1762,1961,-414,1711,1961,-3811
chr17:79988268-79988542	chr17	+	79988308	79988564	True	NM_016286,NM_005052,NM_001195218,NM_144998,NM_144999	chr17,chr17,chr17,chr17,chr17	-,+,-,-,+	DCXR,RAC3,DCXR,STRA13,LRRC45	7059,967,7059,-7535,-7079
chr11:395041-395403	chr11	+	395228	395336	True	NM_007183,NM_001135054	chr11,chr11	+,-	PKP3,SIGIRR	-1062,19713
chr16:31144087-31144651	chr16	+	31144091	31144549	True	NM_002773,NM_182958	chr16,chr16	-,+	PRSS8,MYST1	2652,-15157
chr10:12169690-12170419	chr10	+	12169783	12170438	True	NM_018144,NR_024576,NR_024577,NM_014142,NM_001142628,NM_001142627	chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,-,+,+	SEC61A2,SEC61A2,SEC61A2,NUDT5,SEC61A2,SEC61A2	1201,1201,1201,67756,1201,1201
chr15:66858395-66859769	chr15	+	66858600	66859640	True	NM_207338,NR_003105	chr15,chr15	-,+	LCTL,ZWILCH	-765,-61220
chr16:69792270-69792991	chr16	+	69792291	69793038	True	NM_014062,NM_199423,NM_007014	chr16,chr16,chr16	-,+,+	NOB1,WWP2,WWP2	-3462,3235,3235
chr6:5085806-5086079	chr6	+	5086058	5086128	True	NM_001145115,NR_037462	chr6,chr6	+,-	PPP1R3G,MIR3691	-389,62478
chr22:43581344-43582076	chr22	+	43581473	43582019	True	NM_015140,NM_007311	chr22,chr22	-,+	TTLL12,TSPO	1168,-33989
chr3:44753831-44754123	chr3	+	44753889	44754159	True	NM_020696,NM_033210,NM_001134442,NM_001134441,NM_001134440	chr3,chr3,chr3,chr3,chr3	-,+,+,+,+	KIAA1143,ZNF502,ZNF502,ZNF502,ZNF502	49064,-25,-25,-25,-25
chr16:31276068-31276612	chr16	+	31276476	31276626	True	NM_001145808,NM_000632,NM_152901	chr16,chr16,chr16	+,+,-	ITGAM,ITGAM,PYDC1	-5243,-5243,-48081
chrX:16730896-16731296	chrX	+	16730940	16731150	True	NM_032796,NM_019857,NM_175859,NR_033181,NM_001144002	chrX,chrX,chrX,chrX,chrX	+,-,-,+,-	SYAP1,CTPS2,CTPS2,SYAP1,CTPS2	6556,-21,-165,6556,-600
chr16:20817168-20817609	chr16	+	20817322	20817458	True	NM_080663,NM_001142725,NM_030941,NM_001199053,NM_001144924	chr16,chr16,chr16,chr16,chr16	-,-,+,+,+	ERI2,ERI2,LOC81691,LOC81691,LOC81691	387,387,308,308,308
chrX:70334862-70336137	chrX	+	70334963	70335935	True	NM_000206,NR_033212,NM_001025265,NM_005120	chrX,chrX,chrX,chrX	-,-,-,+	IL2RG,CXorf65,CXorf65,MED12	-3482,-8325,-8325,2470
chr12:51420881-51422644	chr12	+	51421247	51422535	True	NM_000617,NM_001174128,NM_001174129,NM_001174125,NM_001174126,NM_001174127,NM_001024668,NR_033422,NR_033421	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,-,-,-,-,-,+,-,-	SLC11A2,SLC11A2,SLC11A2,SLC11A2,SLC11A2,SLC11A2,LETMD1,SLC11A2,SLC11A2	-1048,-1048,-1323,7,-1048,-1048,19548,-1048,-1048
chr4:75034506-75035805	chr4	+	75034666	75035839	True	NM_002089,NM_001144978	chr4,chr4	-,+	CXCL2,MTHFD2L	-69669,-10889
chr1:8090571-8091808	chr1	+	8090696	8091836	True	NM_007262,NM_018948	chr1,chr1	+,-	PARK7,ERRFI1	-69034,-4303
chr15:82566169-82566966	chr15	+	82566475	82566797	True	NM_024580,NM_001008226	chr15,chr15	-,+	EFTUD1,FAM154B	-11371,-11375
chr17:8864151-8864671	chr17	+	8864203	8864657	True	NM_004822,NM_001142633	chr17,chr17	+,-	NTN1,PIK3R5	60201,4417
chr2:128292649-128292903	chr2	+	128292845	128292932	True	NM_017969,NM_001080527	chr2,chr2	-,+	IWS1,MYO7B	-8758,445
chr12:88437972-88438223	chr12	+	88438066	88438248	True	NM_152589,NM_001009894	chr12,chr12	-,+	C12orf50,C12orf29	-14890,-8856
chr19:51415459-51415673	chr19	+	51415467	51415721	True	NM_004917,NM_005551	chr19,chr19	-,+	KLK4,KLK2	-1473,-38829
chr3:43748597-43750025	chr3	+	43748850	43749962	True	NM_001204834,NM_016006	chr3,chr3	-,+	ANO10,ABHD5	-85290,-16526
chr5:176076024-176076721	chr5	+	176076053	176076767	True	NM_003085,NM_130465,NM_012171,NM_001006616	chr5,chr5,chr5,chr5	-,+,+,+	SNCB,TSPAN17,TSPAN17,TSPAN17	-18496,-1716,-1716,-1716
chr7:63955705-63955930	chr7	+	63955795	63955919	True	NM_178558,NR_029404	chr7,chr7	-,+	ZNF680,LOC649395	67636,-61775
chr22:39417573-39417801	chr22	+	39417765	39417837	True	NM_152426,NM_175709,NM_014508	chr22,chr22,chr22	+,-,+	APOBEC3D,CBX7,APOBEC3C	-698,130751,-7551
chr19:53836113-53836387	chr19	+	53836250	53836410	True	NM_138374,NM_033341	chr19,chr19	+,-	ZNF845,BIRC8	591,-41375
chr3:133382728-133383256	chr3	+	133382732	133383096	True	NM_001063,NM_007027	chr3,chr3	+,-	TF,TOPBP1	81880,-1995
chr12:102556076-102556489	chr12	+	102556125	102556280	True	NM_017915,NM_002674	chr12,chr12	+,-	C12orf48,PMCH	-42227,35391
chr5:140175956-140176235	chr5	+	140175962	140176284	True	NM_031495,NM_031497,NM_018906,NM_018905,NM_002109	chr5,chr5,chr5,chr5,chr5	+,+,+,+,-	PCDHA2,PCDHA3,PCDHA3,PCDHA2,HARS	-1569,4498,4498,-1569,-104991
chr20:62665153-62665384	chr20	+	62665172	62665350	True	NR_027687,NR_027686,NM_018419	chr20,chr20,chr20	+,+,-	NCRNA00176,NCRNA00176,SOX18	346,346,15679
chr2:223739036-223739286	chr2	+	223739036	223739312	True	NM_005687,NM_203372	chr2,chr2	-,+	FARSB,ACSL3	-218209,-13364
chr19:12903535-12903757	chr19	+	12903546	12903792	True	NM_002229,NM_005809,NM_181738	chr19,chr19,chr19	+,-,-	JUNB,PRDX2,PRDX2	-1287,8952,8952
chr11:8283822-8284198	chr11	+	8283997	8284201	True	NM_002315,NM_177972	chr11,chr11	-,+	LMO1,TUB	1255,-181139
chr15:74161940-74163741	chr15	+	74162208	74163781	True	NM_001039614,NM_153356	chr15,chr15	-,+	C15orf59,TBC1D21	-118392,2186
chr1:27337583-27337921	chr1	+	27337587	27337921	True	NM_052943,NM_001013642	chr1,chr1	-,+	FAM46B,TRNP1	1462,-17443
chr17:43595028-43595433	chr17	+	43595027	43595357	True	NR_002940,NR_037772	chr17,chr17	-,+	LRRC37A4,CRHR1	2582,102352
chr17:43595028-43595433	chr17	+	43591034	43591364	False	NR_002940,NR_037772	chr17,chr17	-,+	LRRC37A4,CRHR1	6575,106345
chr17:43595028-43595433	chr17	-	45127948	45128268	False	NM_203400,NM_054022	chr17,chr17	-,+	RPRML,GOSR2	-71334,-127513
chr11:47731733-47732982	chr11	+	47731866	47732879	True	NM_024783,NM_001164379	chr11,chr11	-,+	AGBL2,FAM180B	3478,-123694
chr19:51763568-51764835	chr19	+	51763647	51764517	True	NM_173635,NM_001163922	chr19,chr19	+,-	C19orf75,VSIG10L	-2748,80919
chr1:36863976-36864890	chr1	+	36864280	36864913	True	NM_032881,NM_024676	chr1,chr1	-,+	LSM10,SH3D21	-787,-91623
chr11:125461976-125462534	chr11	+	125462148	125462550	True	NM_001612,NM_152713	chr11,chr11	-,+	ACRV1,STT3A	88293,188
chr4:39459529-39460312	chr4	+	39459571	39460283	True	NM_001024921,NM_194451,NM_000661,NM_006859	chr4,chr4,chr4,chr4	-,+,-,+	RPL9,LIAS,RPL9,LIAS	-26,381,335,381
chr6:26199463-26199943	chr6	+	26199548	26199808	True	NM_021065,NM_003545,NM_003530,NM_003522	chr6,chr6,chr6,chr6	-,+,-,+	HIST1H2AD,HIST1H4E,HIST1H3D,HIST1H2BF	-77,5064,-84,-22
chr10:91151266-91153209	chr10	+	91151740	91153179	True	NM_001548,NM_000235	chr10,chr10	+,-	IFIT1,LIPA	-162,-140080
chr5:76152457-76152923	chr5	+	76152504	76152844	True	NR_003014,NM_130772	chr5,chr5	-,+	SNORA47,S100Z	223602,-6740
chr15:42261666-42262354	chr15	+	42261901	42262395	True	NM_139265,NM_001114633	chr15,chr15	-,+	EHD4,PLA2G4B	2410,-130941
chr11:14665233-14665440	chr11	+	14665297	14665473	True	NM_000922,NM_148976	chr11,chr11	+,-	PDE3B,PSMA1	-79,-117
chr2:63561250-63562852	chr2	+	63561427	63562803	True	NR_036635,NM_005917	chr2,chr2	-,+	DBIL5P2,MDH1	-214750,252939
chr1:3661313-3661599	chr1	+	3661409	3661594	True	NR_033709,NR_033708,NR_033710,NR_033711,NR_033712,NM_152492	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,+	KIAA0495,KIAA0495,KIAA0495,KIAA0495,KIAA0495,CCDC27	2394,2394,2394,2394,1792,7370
chr5:148037799-148038139	chr5	+	148037822	148038092	True	NM_000024,NM_000870	chr5,chr5	+,-	ADRB2,HTR4	168063,-4083
chr5:140799629-140800059	chr5	+	140799647	140799846	True	NM_032091,NM_032090,NM_018927,NM_032092,NM_032101,NM_005642,NM_018914,NM_018913,NR_001297	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,-,+,+,+	PCDHGA11,PCDHGA10,PCDHGB7,PCDHGA11,PCDHGB7,TAF7,PCDHGA11,PCDHGA10,PCDHGB8P	690,-6955,-2438,690,-2484,-99296,690,-6955,6006
chr6:74064640-74065520	chr6	+	74064687	74065364	True	NM_001017361,NM_001025290	chr6,chr6	+,-	C6orf221,DPPA5	7035,-688
chr10:38146951-38147214	chr10	+	38147093	38147241	True	NM_021045,NM_006954	chr10,chr10	-,+	ZNF248,ZNF33A	-607,152336
chr6:42165165-42166000	chr6	+	42165201	42165839	True	NM_000409,NM_002098	chr6,chr6	+,-	GUCA1A,GUCA1B	-42108,-2507
chr19:34664251-34664945	chr19	+	34664260	34664734	True	NM_001114093,NM_015578,NR_027620	chr19,chr19,chr19	+,+,-	LSM14A,LSM14A,LOC643719	-959,-959,403912
chr16:57672399-57672836	chr16	+	57672496	57672695	True	NM_001145774,NM_033212	chr16,chr16	+,-	GPR56,CCDC102A	511,-102019
chr1:161410433-161410636	chr1	+	161410433	161410555	True	NM_001136219,NM_001013625	chr1,chr1	+,-	FCGR2A,C1orf192	64649,-72769
chr5:87564663-87565238	chr5	+	87564738	87565279	True	NM_153354,NM_022650	chr5,chr5	-,+	TMEM161B,RASA1	-73,-1000023
chr10:16479505-16480095	chr10	+	16479645	16479981	True	NM_001001484,NM_001010908,NM_030664	chr10,chr10,chr10	+,-,+	PTER,C1QL3,PTER	-729,84073,-729
chr19:40502472-40502697	chr19	+	40502491	40502721	True	NM_001005851,NM_178544	chr19,chr19	-,+	ZNF780B,ZNF546	59444,221
chr16:33365518-33367074	chr16	+	33366644	33366785	True	NR_033866,NM_001205265	chr16,chr16	-,+	LOC390705,TP53TG3B	-67942,-104584
chr3:98313735-98314311	chr3	+	98313803	98314349	True	NM_005290,NM_000097	chr3,chr3	+,-	GPR15,CPOX	-62977,-1348
chr3:52569133-52569641	chr3	+	52569232	52569516	True	NM_001124767,NM_001134231,NM_022908	chr3,chr3,chr3	+,-,-	C3orf78,NT5DC2,NT5DC2	1104,-1439,-139
chr11:8954254-8954542	chr11	+	8954263	8954565	True	NM_020643,NM_182901	chr11,chr11	-,+	C11orf16,C11orf17	38,-21512
chr2:174220655-174221323	chr2	+	174220707	174221141	True	NM_031942,NM_145810,NR_033882	chr2,chr2,chr2	+,+,-	CDCA7,CDCA7,LOC339751	-1197,-1197,-73943
chrX:67914110-67914501	chrX	+	67914147	67914534	True	NM_001142504,NM_002547	chrX,chrX	+,-	STARD8,OPHN1	-716,-260848
chrX:20131570-20132309	chrX	+	20131648	20131920	True	NM_152780,NM_001173456,NM_001168465,NM_001168466,NM_001168467	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	MAP7D2,PDHA1,MAP7D2,MAP7D2,MAP7D2	3249,-769693,3249,3249,2891
chr8:69358183-69358679	chr8	+	69358422	69358719	True	NM_052958,NM_020361	chr8,chr8	+,-	C8orf34,CPA6	-115523,-699802
chr3:2158527-2159446	chr3	+	2158715	2159489	True	NM_175607,NM_000564	chr3,chr3	+,-	CNTN4,IL5RA	-18224,992619
chr1:161358673-161359599	chr1	+	161358678	161359644	True	NM_001013625,NM_003001	chr1,chr1	-,+	C1orf192,SDHC	-21014,-74563
chr6:27860787-27861249	chr6	+	27860807	27861232	True	NM_003514,NM_003527,NM_003535	chr6,chr6,chr6	-,+,-	HIST1H2AM,HIST1H2BO,HIST1H3J	16,-30,-2237
chr9:136446319-136446824	chr9	+	136446342	136446750	True	NM_014694,NM_001080515	chr9,chr9	+,-	ADAMTSL2,FAM163B	-46425,-974
chr2:230578185-230578441	chr2	+	230578226	230578480	True	NM_174899,NM_139072	chr2,chr2	+,-	FBXO36,DNER	208726,856
chr5:179051608-179052212	chr5	+	179051622	179052152	True	NM_005520,NM_001040452	chr5,chr5	-,+	HNRNPH1,RUFY1	-900,-64941
chrX:48540798-48541206	chrX	+	48540810	48540938	True	NM_013271,NM_000377	chrX,chrX	-,+	PCSK1N,WAS	153080,1247
chr21:39286043-39286683	chr21	+	39286213	39286619	True	NM_002240,NR_026838	chr21,chr21	-,+	KCNJ6,DSCR8	2127,206925
chr10:86087408-86087682	chr10	+	86087417	86087734	True	NM_018999,NM_015613	chr10,chr10	+,-	FAM190B,LRIT1	675,-86200
chr11:76431181-76432217	chr11	+	76431186	76431934	True	NM_015516,NR_024042	chr11,chr11	+,-	TSKU,GUCY2E	62350,961
chr2:47795269-47796764	chr2	+	47795375	47796801	True	NM_022055,NM_000251	chr2,chr2	-,+	KCNK12,MSH2	719,-165177
chr4:25862453-25862705	chr4	+	25862464	25862755	True	NM_001145432,NM_015187	chr4,chr4	+,-	C4orf52,SEL1L3	53058,1906
chr13:42624429-42624845	chr13	+	42624545	42624662	True	NM_178009,NM_152910,NM_001009814	chr13,chr13,chr13	+,+,-	DGKH,DGKH,KIAA0564	-1763,-1763,-89324
chr2:37369569-37370091	chr2	+	37369841	37370090	True	NM_001135652,NR_037879	chr2,chr2	-,+	EIF2AK2,LOC100505876	4936,53544
chr4:120546256-120548000	chr4	+	120546444	120547927	True	NM_033437,NM_033430,NR_037630,NM_001083	chr4,chr4,chr4,chr4	-,-,+,-	PDE5A,PDE5A,LOC645513,PDE5A	1362,565,-170558,2104
chr22:39096074-39096496	chr22	+	39096076	39096503	True	NM_014876,NM_004286	chr22,chr22	-,+	JOSD1,GTPBP1	6,5303
chr19:7552467-7553019	chr19	+	7552771	7553057	True	NM_080662,NM_198534	chr19,chr19	-,+	PEX11G,C19orf45	898,9387
chr6:33333645-33334132	chr6_qbl_hap6	+	4565893	4566131	False	NM_001350,NM_002263	chr6_qbl_hap6,chr6_qbl_hap6	-,+	DAXX,KIFC1	-42851,25408
chr6:33333645-33334132	chr6_mcf_hap5	+	4807398	4807636	False	NM_001350,NM_001185181	chr6_mcf_hap5,chr6_mcf_hap5	-,+	DAXX,PFDN6	-42863,-76293
chr6:33333645-33334132	chr6	+	33333652	33333890	True	NR_024517,NM_002263	chr6,chr6	-,+	DAXX,KIFC1	-42859,25422
chr6:33333645-33334132	chr6_apd_hap1	+	4620445	4620683	False	NM_033554,NR_001435	chr6_apd_hap1,chr6_apd_hap1	-,+	HLA-DPA1,HLA-DPB2	-292266,-253439
chr6:33333645-33334132	chr6_cox_hap2	+	4777466	4777704	False	NM_001350,NM_001185181	chr6_cox_hap2,chr6_cox_hap2	-,+	DAXX,PFDN6	-42855,-76291
chr7:99099101-99099972	chr7	+	99099399	99099813	True	NM_145102,NM_014569,NM_032164	chr7,chr7,chr7	+,+,-	ZKSCAN5,ZKSCAN5,ZNF394	2459,2759,-1522
chr9:140514370-140515031	chr9	+	140514444	140514801	True	NM_024757,NM_001145527	chr9,chr9	+,+	EHMT1,EHMT1	-1058,-1058
chr17:4166013-4166704	chr17	+	4166062	4166552	True	NM_016376,NM_020740,NR_023347	chr17,chr17,chr17	-,-,+	ANKFY1,ANKFY1,CYB5D2	772,772,-119658
chr11:66890830-66891565	chr11	+	66890829	66891143	True	NM_012308,NM_001040716,NR_027473	chr11,chr11,chr11	+,-,+	KDM2A,PC,KDM2A	-4150,-164982,-4150
chr4:164415243-164415451	chr4	+	164415253	164415448	True	NM_032136,NM_018352	chr4,chr4	-,+	TKTL2,C4orf43	-20206,224
chr15:82645027-82645251	chr15	+	82645145	82645220	True	NR_004847,NR_024474,NM_001164465	chr15,chr15,chr15	+,+,-	UBE2Q2P2,UBE2Q2P3,GOLGA6L10	2065,2065,-3439
chr15:82645027-82645251	chr15	-	84900972	84901047	False	NR_027001,NR_033738	chr15,chr15	-,+	LOC388152,LOC440300	-2052,-40428
chr15:82645027-82645251	chr15	+	82942636	82942711	False	NR_026811,NR_033936,NR_033579	chr15,chr15,chr15	+,+,-	LOC80154,LOC727849,LOC440297	2110,2081,43771
chr15:82645027-82645251	chr15	+	83021637	83021712	False	NR_004847,NR_024474,NM_001164465	chr15,chr15,chr15	+,+,-	UBE2Q2P2,UBE2Q2P3,GOLGA6L10	2060,2060,-3439
chr17:64876949-64878774	chr17	+	64877202	64878400	True	NM_014877,NM_145811	chr17,chr17	-,+	HELZ,CACNG5	362969,-3864
chr12:56414506-56415345	chr12	+	56414510	56415390	True	NM_006928,NM_022465	chr12,chr12	-,+	PMEL,IKZF4	-54014,128
chr20:23968976-23969283	chr20	+	23969245	23969327	True	NM_178312,NM_178311,NR_001279	chr20,chr20,chr20	-,-,+	GGTLC1,GGTLC1,CSTT	-1733,139,-469513
chr11:1872658-1873202	chr11	+	1872713	1873092	True	NM_002339,NR_036185	chr11,chr11	+,-	LSP1,MIR4298	1107,7724
chr5:148929625-148930656	chr5	+	148929759	148930502	True	NM_001892,NM_001001669,NM_001025105	chr5,chr5,chr5	-,+,-	CSNK1A1,ARHGEF37,CSNK1A1	555,30632,555
chr5:55523152-55523508	chr5	+	55523345	55523557	True	NM_024669,NM_139017	chr5,chr5	-,+	ANKRD55,IL31RA	5684,-376073
chr18:56802852-56804381	chr18	+	56802863	56803929	True	NM_033280,NM_013435	chr18,chr18	+,-	SEC11C,RAX	3195,136756
chr7:27241157-27241993	chr7	+	27241364	27242022	True	NM_000522,NR_037843	chr7,chr7	-,+	HOXA13,NCRNA00213	-1639,-1359
chr11:82783169-82784055	chr11	+	82783220	82783716	True	NM_015885,NM_014488	chr11,chr11	+,-	PCF11,RAB30	84420,-336
chr20:42297133-42297373	chr20	+	42297132	42297330	True	NM_001008901,NM_002466	chr20,chr20	-,+	GTSF1L,MYBL2	58362,-1474
chr6:26123818-26124538	chr6	+	26123896	26124536	True	NM_003526,NM_003512	chr6,chr6	-,+	HIST1H2BC,HIST1H2AC	-8,15
chr1:213030116-213030977	chr1	+	213030118	213030609	True	NM_014053,NM_001024601,NR_027286,NR_027285	chr1,chr1,chr1,chr1	+,-,-,-	FLVCR1,C1orf227,NCRNA00292,NCRNA00292	987,-9127,928,928
chr14:52535117-52535350	chr14	+	52535169	52535375	True	NM_007361,NM_016039	chr14,chr14	-,+	NID2,C14orf166	621,-78992
chr5:6327799-6328571	chr5	+	6327967	6328477	True	NM_001145161,NR_028351	chr5,chr5	+,-	UBE2QL1,FLJ33360	120258,8978
chr5:34931172-34932241	chr5	+	34931296	34932246	True	NM_194283,NM_002853,NM_001012339	chr5,chr5,chr5	+,-,+	DNAJC21,RAD1,DNAJC21	-1655,-15516,-1655
chr11:5006159-5007969	chr11	+	5006289	5007349	True	NM_021801,NM_001004748	chr11,chr11	+,-	MMP26,OR51A2	2074,-29346
chr20:58507792-58507994	chr20	+	58507796	58508036	True	NM_022106,NM_001190827,NM_006242,NM_001190826,NM_014258	chr20,chr20,chr20,chr20,chr20	+,+,-,+,-	C20orf177,C20orf177,PPP1R3D,C20orf177,SYCP2	7407,7407,7366,782,-587
chr2:27616922-27617520	chr2	+	27617162	27617321	True	NM_014748,NR_002201	chr2,chr2	+,-	SNX17,FTH1P3	-23837,-719
chr10:47243872-47244351	chr10	+	47243886	47244380	True	NR_027634,NR_024495	chr10,chr10	+,-	FAM35B2,LOC642826	135339,-392
chr10:47243872-47244351	chr10	+	46763561	46763615	False	NR_027632,NR_026566,NR_003611	chr10,chr10,chr10	+,-,-	FAM35B,BMS1P1,BMS1P5	134025,-669,-669
chr10:47243872-47244351	chr10	+	48952886	48953352	False	NR_026566,NM_153034,NR_003611	chr10,chr10,chr10	-,+,-	BMS1P1,ZNF488,BMS1P5	-257,-597848,-257
chr10:47243872-47244351	chr10	-	48184976	48185463	False	NM_002900,NR_024495	chr10,chr10	-,+	RBP3,LOC642826	205578,392
chr7:151217201-151217617	chr7	+	151217282	151217588	True	NM_005614,NR_034013	chr7,chr7	-,+	RHEB,LOC100131176	-272,-111011
chr3:101577629-101579314	chr3	+	101577640	101578976	True	NM_000986,NM_031419	chr3,chr3	-,+	RPL24,NFKBIZ	-172077,-9348
chr9:111929942-111931426	chr9	+	111930274	111931428	True	NM_014334,NM_017832	chr9,chr9	-,+	C9orf4,C9orf6	-703,-233659
chrX:33014745-33015654	chrX	+	33014942	33015233	True	NM_004007,NM_152631	chrX,chrX	-,+	DMD,FAM47B	23143,1945679
chr15:61518688-61519197	chr15	+	61518688	61519239	True	NM_134261,NM_207322	chr15,chr15	-,+	RORA,C2CD4A	2314,839936
chr22:24373804-24374128	chr22	+	24373819	24373913	True	NM_001144931,NM_000853	chr22,chr22	+,-	LOC391322,GSTT1	-760,10421
chr11:314389-314805	chr11	+	314478	314672	True	NM_006435,NM_021034,NM_003641	chr11,chr11,chr11	+,-,+	IFITM2,IFITM3,IFITM1	-6422,6292,-538
chr17:18856120-18856738	chr17	+	18856120	18856350	True	NM_001042450,NM_001039999,NM_152351	chr17,chr17,chr17	+,-,+	SLC5A10,FAM83G,SLC5A10	-693,51760,-693
chr5:6713454-6713812	chr5	+	6713593	6713849	True	NM_001171805,NR_037947,NM_006999	chr5,chr5,chr5	+,-,+	PAPD7,NSUN2,PAPD7	868,-80120,868
chr1:152970102-152970713	chr1	+	152970203	152970699	True	NM_006945,NM_005416,NM_001097589	chr1,chr1,chr1	-,+,+	SPRR2D,SPRR3,SPRR3	42945,3523,3523
chr22:37976498-37976897	chr22	+	37976628	37976828	True	NM_152243,NM_006498	chr22,chr22	+,-	CDC42EP1,LGALS2	-20222,-604
chr19:49775915-49776842	chr19	+	49776203	49776416	True	NM_001040031,NR_036209	chr19,chr19	+,-	CD37,MIR4324	62260,35764
chr3:47944018-47945567	chr3	+	47944217	47945607	True	NR_031595,NM_003074	chr3,chr3	+,-	MIR1226,SMARCC1	-53230,-120812
chr1:156552240-156552861	chr1	+	156552293	156552663	True	NM_144772,NM_178229,NM_001105669	chr1,chr1,chr1	+,-,+	APOA1BP,IQGAP3,TTC24	8894,-9897,-2825
chr13:114537979-114538393	chr13	+	114538209	114538441	True	NM_001143945,NM_001143946,NR_024609	chr13,chr13,chr13	-,-,+	GAS6,GAS6,FLJ44054	626,-1495,48168
chr4:122842599-122843164	chr4	+	122842704	122843060	True	NM_003305,NM_005033	chr4,chr4	-,+	TRPC3,EXOSC9	11264,-120290
chr12:114843829-114844358	chr12	+	114843918	114844239	True	NM_181486,NM_080718,NM_080717,NM_138432,NM_000192	chr12,chr12,chr12,chr12,chr12	-,-,-,+,-	TBX5,TBX5,TBX5,SDSL,TBX5	-29,-2215,2058,-983753,2058
chr1:12081373-12082054	chr1	+	12081513	12082021	True	NM_021933,NM_138346	chr1,chr1	+,-	MIIP,KIAA2013	-2065,-95028
chr1:148928176-148928451	chr1	+	148928178	148928370	True	NR_027355,NR_027354,NM_001024599,NR_027356	chr1,chr1,chr1,chr1	+,+,-,+	LOC645166,LOC645166,HIST2H2BF,LOC645166	3,2034,470909,3
chr10:90712426-90712682	chr10	+	90712426	90712680	True	NM_001613,NM_000043	chr10,chr10	-,+	ACTA2,FAS	-18,37607
chr11:65771983-65772225	chr11	+	65771991	65772273	True	NM_003860,NM_001143985,NM_032325,NM_001323	chr11,chr11,chr11,chr11	+,+,-,+	BANF1,BANF1,EIF1AD,CST6	-2492,-2492,-2413,7188
chr1:223113661-223114508	chr1	+	223113880	223114544	True	NM_032890,NM_003268	chr1,chr1	+,-	DISP1,TLR5	-125507,202130
chr19:17931781-17931999	chr19	+	17931939	17932015	True	NM_014256,NM_005543	chr19,chr19	+,-	B3GNT3,INSL3	-26071,355
chr5:176924537-176924783	chr5	+	176924550	176924788	True	NM_213636,NM_001174102,NM_203352,NM_005451	chr5,chr5,chr5,chr5	-,+,-,-	PDLIM7,PRR7,PDLIM7,PDLIM7	52,-49275,52,52
chr1:110199777-110200191	chr1	+	110199967	110200121	True	NM_000850,NM_147148,NR_024538,NM_005272	chr1,chr1,chr1,chr1	+,+,+,-	GSTM4,GSTM4,GSTM4,GNAT2	-1320,-1320,-1320,-44262
chr6:43027409-43027831	chr6	+	43027449	43027853	True	NM_015950,NM_001168370,NM_014780,NM_201521,NM_201523,NM_201522,NM_138343	chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,+,+,+,+	MRPL2,CUL7,CUL7,KLC4,KLC4,KLC4,KLC4	-207,-5766,-5766,-130,-67,328,-130
chr11:47589765-47590536	chr11	+	47589775	47590233	True	NM_001143984,NM_175732,NM_016506	chr11,chr11,chr11	+,+,-	PTPMT1,PTPMT1,KBTBD4	-2845,-2845,10338
chr1:27190143-27190406	chr1	+	27190212	27190404	True	NM_018066,NM_006142	chr1,chr1	-,+	GPN2,SFN	26515,-630
chr12:22488357-22488626	chr12	+	22488433	22488675	True	NM_018686,NM_001039481,NM_003034	chr12,chr12,chr12	+,+,-	CMAS,ETNK1,ST8SIA1	-289325,289400,-785
chr7:90407780-90409042	chr7	+	90407821	90409012	True	NM_006980,NM_012395	chr7,chr7	-,+	MTERF,CDK14	1101067,-69161
chr1:27306411-27306624	chr1	+	27306565	27306651	True	NM_152365,NM_001013642	chr1,chr1	-,+	C1orf172,TRNP1	-19664,13543
chr22:51002170-51002447	chr22	+	51002187	51002403	True	NM_001123225,NM_138433	chr22,chr22	-,+	C22orf41,KLHDC7B	-859,-15776
chr10:133749421-133749742	chr10	+	133749574	133749639	True	NM_018461,NM_004052,NR_033191	chr10,chr10,chr10	+,-,+	PPP2R2D,BNIP3,PPP2R2D	-1666,45847,-1666
chr6:693893-694589	chr6	+	694113	694289	True	NM_018303,NR_036585	chr6,chr6	-,+	EXOC2,IRF4	-1004,-302425
chr12:10659926-10660451	chr12	+	10659931	10660176	True	NM_213658,NM_007334	chr12,chr12	-,+	KLRC1,KLRD1	-52716,-199571
chr11:20412518-20412882	chr11	+	20412619	20412780	True	NM_001029865,NM_005788,NM_001145166,NM_001145167	chr11,chr11,chr11,chr11	-,+,+,+	DBX1,PRMT3,PRMT3,PRMT3	-230749,-3601,-3601,-3601
chr1:201952423-201953217	chr1	+	201952526	201953052	True	NM_020216,NM_012134	chr1,chr1	+,-	RNPEP,LMOD1	-811,-36810
chr7:102120567-102122484	chr7	+	102120675	102121829	True	NM_006234,NM_152892	chr7,chr7	-,+	POLR2J,LRWD1	-1294,-15336
chr7:102120567-102122484	chr7	+	44066665	44066721	False	NR_015401,NR_003655	chr7,chr7	+,-	FLJ35390,POLR2J4	11976,-7917
chr7:102120567-102122484	chr7	+	102220956	102221006	False	NM_001166339,NM_001097615	chr7,chr7	+,-	SPDYE2L,POLR2J3	-29328,-7888
chr7:102120567-102122484	chr7	+	102320018	102320068	False	NM_032959,NM_001166339	chr7,chr7	-,+	POLR2J2,SPDYE2L	-7836,-29297
chr19:57752352-57752940	chr19	+	57752392	57752634	True	NM_001023563,NM_001012729,NM_001145078	chr19,chr19,chr19	+,-,+	ZNF805,DUXA,ZNF805	-390,-73536,-390
chr4:128733486-128735007	chr4	+	128733636	128734795	True	NM_014278,NM_152778	chr4,chr4	+,-	HSPA4L,MFSD8	-30240,152402
chr5:178051203-178052070	chr5	+	178051459	178052124	True	NM_020666,NM_058230	chr5,chr5	-,+	CLK4,ZNF354B	1987,234829
chr12:26347637-26348334	chr12	+	26348055	26348361	True	NM_001135823,NM_005086,NM_030762	chr12,chr12,chr12	+,+,-	SSPN,SSPN,BHLHE41	48,144,-70052
chr3:158451353-158451837	chr3	+	158451358	158451886	True	NM_206963,NM_002888,NM_001167903	chr3,chr3,chr3	-,-,+	RARRES1,RARRES1,MFSD1	-1083,-1083,67828
chr22:29467745-29468704	chr22	+	29467822	29468677	True	NM_015370,NM_032045,NM_001039570	chr22,chr22,chr22	-,+,+	C22orf31,KREMEN1,KREMEN1	-9915,388,388
chr4:159959796-159961616	chr4	+	159960011	159961248	True	NM_152543,NM_014247	chr4,chr4	-,+	C4orf45,RAPGEF2	-3678,227749
chr1:111217258-111217573	chr1	+	111217285	111217575	True	NM_002232,NR_003599	chr1,chr1	-,+	KCNA3,CYMP	130,-193948
chr11:45940122-45940353	chr11	+	45940176	45940384	True	NM_152312,NM_004813,NM_057174	chr11,chr11,chr11	+,-,-	GYLTL1B,PEX16,PEX16	2811,-502,-502
chr11:18432903-18433498	chr11	+	18433104	18433554	True	NM_017448,NM_181508,NM_002301	chr11,chr11,chr11	+,-,+	LDHC,HPS5,LDHC	298,-89383,298
chr11:65640514-65640864	chr11	+	65640525	65640723	True	NR_037718,NM_016938,NM_001335	chr11,chr11,chr11	-,-,+	EFEMP2,EFEMP2,CTSW	-120,-120,6560
chr10:101290572-101290836	chr10	+	101290609	101290751	True	NM_031212,NM_145285	chr10,chr10	-,+	SLC25A28,NKX2-3	89520,1938
chr8:97507502-97508494	chr8	+	97507924	97508469	True	NM_015942,NM_002998	chr8,chr8	-,+	MTERFD1,SDC2	-234128,-2093
chr19:12175042-12175491	chr19	+	12175121	12175383	True	NM_001136501,NM_001080404	chr19,chr19	+,-	ZNF844,ZNF878	162,-7994
chr3:167368733-167369506	chr3	+	167368749	167369540	True	NM_178824,NM_001122752	chr3,chr3	-,+	WDR49,SERPINI1	1804,83891
chr11:119250924-119251196	chr11	+	119250927	119251051	True	NM_004205,NR_034160	chr11,chr11	-,+	USP2,LOC100499227	1435,1436
chr11:27536234-27537645	chr11	+	27536318	27537411	True	NR_033312,NR_033313,NR_033314,NR_033315,NR_002832,NM_018362	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,-	BDNF-AS1,BDNF-AS1,BDNF-AS1,BDNF-AS1,BDNF-AS1,LIN7C	-7983,-7983,-7983,-7983,-7983,-7992
chr8:144766096-144766331	chr8	+	144766232	144766348	True	NM_001162914,NM_001100598,NM_001100599,NM_173831	chr8,chr8,chr8,chr8	-,+,+,+	LOC100130274,ZNF707,ZNF707,ZNF707	23981,273,273,273
chr19:11648891-11649120	chr19	+	11648934	11649168	True	NM_001142464,NM_001142465,NM_016581,NR_024551,NM_001299	chr19,chr19,chr19,chr19,chr19	-,-,-,-,+	ECSIT,ECSIT,ECSIT,ECSIT,CNN1	-8947,-8947,-8947,-9254,410
chr5:177541686-177543095	chr5	+	177542076	177542863	True	NM_015111,NM_001034833	chr5,chr5	+,-	N4BP3,NHP2	-1571,38148
chr4:9572835-9574525	chr4	+	9573103	9573777	True	NR_031688,NM_001040448	chr4,chr4	-,+	MIR548I2,DEFB131	-15166,-126894
chr22:23484615-23486047	chr22	+	23484883	23485989	True	NM_004914,NM_014433	chr22,chr22	+,-	RAB36,RTDR1	1523,-642
chr11:123910050-123910334	chr11	+	123910221	123910368	True	NM_001004464,NM_001004463	chr11,chr11	+,-	OR10G8,OR10G7	-9942,-513
chr12:51318055-51318273	chr12	+	51318101	51318297	True	NM_014033,NM_001174130	chr12,chr12	+,-	METTL7A,SLC11A2	236,84806
chr5:21459809-21461229	chr6	-	58287001	58287350	False	NM_000947,NR_003660	chr6,chr6	+,-	PRIM2,GUSBP4	-1104637,424
chr5:21459809-21461229	chr5	+	21459931	21461280	True	NR_027027,NR_027026,NM_004061,NR_027028	chr5,chr5,chr5,chr5	+,+,-,+	GUSBP1,GUSBP1,CDH12,GUSBP1	-393,-393,1392507,-393
chr5:21459809-21461229	chr5	+	37381032	37381088	False	NM_153485,NM_018034	chr5,chr5	-,+	NUP155,WDR70	-9835,-1677
chr17:25410677-25411004	chr17	+	25410696	25410924	True	NM_015626,NM_000625	chr17,chr17	+,-	WSB1,NOS2	210181,716681
chr2:20189657-20189862	chr2	+	20189794	20189872	True	NM_001006657,NR_033875,NM_020779	chr2,chr2,chr2	-,+,-	WDR35,FLJ12334,WDR35	62,-121230,62
chr7:155415310-155415780	chr7	+	155415690	155415801	True	NM_001103176,NM_053043	chr7,chr7	-,+	CNPY1,RBM33	-89151,21401
chr9:134164209-134164648	chr9	+	134164415	134164695	True	NM_032728,NM_033387	chr9,chr9	+,-	PPAPDC3,FAM78A	385,-12509
chr2:237994595-237994849	chr2	+	237994649	237994863	True	NM_004369,NM_006710,NM_198189	chr2,chr2,chr2	-,+,+	COL6A3,COPS8,COPS8	328037,-616,-616
chr12:498572-498778	chr12	+	498591	498803	True	NM_001042603,NM_001130147,NM_001130148	chr12,chr12,chr12	-,+,+	KDM5A,CCDC77,CCDC77	11,-126,-126
chr7:39696688-39697309	chr7	+	39696863	39697243	True	NM_138701,NM_005402	chr7,chr7	-,+	C7orf11,RALA	477066,-33762
chr8:21912994-21913419	chr8	+	21913075	21913283	True	NM_001978,NM_024815,NM_001114135,NM_001114137,NM_001114136,NM_001114139,NM_001114138	chr8,chr8,chr8,chr8,chr8,chr8,chr8	+,-,+,+,+,+,+	EPB49,NUDT18,EPB49,EPB49,EPB49,EPB49,EPB49	3402,53699,2092,-2045,-798,-798,3402
chr21:34854847-34855673	chr21	+	34854957	34855627	True	NM_032195,NM_001040192,NM_006134,NM_017833	chr21,chr21,chr21,chr21	+,-,-,-	SON,DNAJC28,TMEM50B,DNAJC28	59722,8456,-2676,8223
chr11:111949000-111950627	chr11	+	111949163	111950464	True	NM_018195,NM_001082969,NR_028383,NM_138789,NM_003002,NM_001082619,NM_012459,NM_001082970	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,-,-,+,-,-,+	C11orf57,C11orf57,TIMM8B,PIH1D2,SDHD,PIH1D2,TIMM8B,C11orf57	-4246,-4246,7108,-4268,7106,-4268,7108,-4246
chr22:21398473-21398857	chr22	+	21398567	21398777	True	NR_027006,NR_002829	chr22,chr22	+,-	LOC400891,P2RX6P	1471,-29
chr3:108337629-108338437	chr3	+	108338021	108338451	True	NM_020890,NM_014648	chr3,chr3	-,+	KIAA1524,DZIP3	-29530,-29748
chr16:2247045-2247343	chr16	+	2247082	2247154	True	NM_001199174,NM_001199175,NM_020764,NM_001199173,NM_022372	chr16,chr16,chr16,chr16,chr16	+,+,-,+,+	MLST8,MLST8,CASKIN1,MLST8,MLST8	8577,8023,-617,8023,8023
chr1:27975257-27975933	chr1	+	27975263	27975917	True	NM_001143912,NM_005248	chr1,chr1	+,-	FAM76A,FGR	76572,-13536
chr22:36651237-36651736	chr22	+	36651242	36651660	True	NM_145637,NM_145343,NM_001136540,NM_001136541,NM_003661	chr22,chr22,chr22,chr22,chr22	-,+,+,+,+	APOL2,APOL1,APOL1,APOL1,APOL1	-15242,-2176,-2176,-2176,-2176
chr12:121145270-121145601	chr12	+	121145287	121145460	True	NM_001080533,NM_198202	chr12,chr12	+,-	UNC119B,POP5	2370,-126086
chr19:13058740-13058997	chr19	+	13058745	13058819	True	NM_005053,NM_004343,NM_052850	chr19,chr19,chr19	+,+,-	RAD23A,CALR,GADD45GIP1	-2142,-9382,9281
chr18:47017916-47018509	chr18	+	47017944	47018462	True	NM_001199341,NM_001199356,NM_001199343,NM_001199342,NM_001199345,NM_001199344,NM_001199340,NM_001035006,NM_001035005,NR_031720,NM_000985,NM_001199355,NR_002571,NR_002572,NR_002573,NM_001199346,NR_003701	chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18	-,-,-,-,-,-,-,-,-,+,-,-,-,-,-,-,-	RPL17,RPL17-C18ORF32,RPL17,RPL17,RPL17,RPL17,RPL17,RPL17,C18orf32,MIR1539,RPL17,RPL17-C18ORF32,SNORD58A,SNORD58B,U58,C18orf32,SNORD58C	422,523,422,422,523,422,523,523,-4300,-4262,523,10,-227,39,-2266,-4300,-2250
chr1:144056811-144058163	chr1	+	144056816	144057627	True	NM_207418,NR_034178	chr1,chr1	-,+	FAM72D,SRGAP2P2	-143673,-141119
chr1:144056811-144058163	chr1	+	206519511	206520319	False	NM_001042758,NM_015326,NM_001007544,NM_001170637	chr1,chr1,chr1,chr1	+,+,-,+	SRGAP2,SRGAP2,C1orf186,SRGAP2	-3362,-3362,-230864,-3362
chr3:143537392-143537846	chr3	+	143537481	143537651	True	NM_173653,NM_173552	chr3,chr3	-,+	SLC9A9,C3orf58	29772,152988
chrX:108714479-108715832	chrX	+	108714647	108715866	True	NM_018698,NM_001522	chrX,chrX	+,-	NXT2,GUCY2F	63143,9469
chr20:4132473-4132779	chr20	+	4132473	4132725	True	NM_175839,NM_000678,NM_175840,NM_175841,NM_175842	chr20,chr20,chr20,chr20,chr20	+,-,+,+,+	SMOX,ADRA1D,SMOX,SMOX,SMOX	-3074,96984,-3074,-3074,-3074
chr10:90521444-90523327	chr10	+	90521820	90523368	True	NM_001102469,NM_144590	chr10,chr10	+,-	LIPN,ANKRD22	-717,88414
chr20:57593053-57593757	chr20	+	57593114	57593806	True	NM_001336,NM_030773	chr20,chr20	-,+	CTSZ,TUBB1	-10805,502
chr14:100526690-100527940	chr14	+	100526826	100527452	True	NM_016337,NM_206918	chr14,chr14	+,-	EVL,DEGS2	4298,98611
chr10:95255529-95255763	chr10	+	95255532	95255704	True	NM_001127182,NM_133337,NM_018131	chr10,chr10,chr10	+,-,+	CEP55,MYOF,CEP55	664,-13458,684
chr15:74217902-74218408	chr15	+	74217993	74218395	True	NM_004809,NM_005576	chr15,chr15	-,+	STOML1,LOXL1	66290,393
chr2:227700346-227700611	chr2	+	227700412	227700556	True	NM_001167608,NM_032276,NM_005544	chr2,chr2,chr2	+,+,-	RHBDD1,RHBDD1,IRS1	114,114,-36906
chr1:78958505-78960449	chr1	+	78958547	78960210	True	NM_022159,NM_001039585,NM_000959,NM_003902	chr1,chr1,chr1,chr1	-,+,+,-	ELTD1,PTGFR,PTGFR,FUBP1	512335,-1870,-1870,-513770
chr11:113259648-113260214	chr11	+	113259674	113260210	True	NM_178510,NR_036183	chr11,chr11	+,-	ANKK1,MIR4301	-1219,60650
chr17:42907902-42908754	chr17	+	42907963	42908771	True	NM_016438,NM_001080383,NM_005497	chr17,chr17,chr17	+,-,-	HIGD1B,GJC1,GJC1	16507,12,-356
chr2:173031326-173031928	chr15	+	41591524	41591608	False	NM_007280,NR_026757	chr15,chr15	-,+	OIP5,LOC729082	33261,-15374
chr2:173031326-173031928	chr2	+	173031397	173031941	True	NM_178120,NM_004405	chr2,chr2	+,-	DLX1,DLX2	-81248,-63919
chr17:1417826-1418496	chr17	+	1417831	1418545	True	NM_130766,NM_016532,NM_001135642,NR_028514	chr17,chr17,chr17,chr17	-,-,-,+	INPP5K,INPP5K,INPP5K,LOC100306951	1687,1687,1687,1667
chr14:20881737-20882838	chr14	+	20881954	20882536	True	NM_007110,NM_001641	chr14,chr14	-,+	TEP1,APEX1	-375,40753
chr10:35487931-35488976	chr10	+	35488169	35488747	True	NM_182717,NM_001198777,NM_182718,NM_182719,NM_182725,NM_182724,NM_182723,NM_182722,NM_182721,NM_182720	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,-,+,+,+,+,+,+,+,+	CREM,CUL2,CREM,CREM,CREM,CREM,CREM,CREM,CREM,CREM	-4172,-108599,-4172,-4172,-3397,-3397,-3397,-3397,-3397,-4172
chr3:120026238-120026593	chr3	+	120026243	120026633	True	NM_001099678,NM_001168331	chr3,chr3	-,+	LRRC58,NDUFB4	41603,288494
chr2:75779026-75780267	chr2	+	75779348	75780090	True	NM_014763,NM_001135032	chr2,chr2	+,-	MRPL19,FAM176A	93818,8060
chr11:46404952-46405950	chr11	+	46404951	46405934	True	NM_001012333,NM_002391,NM_001012334,NM_000741	chr11,chr11,chr11,chr11	+,+,+,-	MDK,MDK,MDK,CHRM4	-1699,-1783,-2384,2223
chr9:92219241-92219843	chr9	+	92219322	92219872	True	NM_006705,NM_006378	chr9,chr9	+,-	GADD45G,SEMA4D	54,-124711
chr5:140262044-140262294	chr5	+	140262231	140262339	True	NM_031865,NM_031864,NM_002109,NM_018903,NM_018904	chr5,chr5,chr5,chr5,chr5	+,+,-,+,+	PCDHA13,PCDHA12,HARS,PCDHA12,PCDHA13	-429,-7352,-191260,-7352,-429
chr1:161494729-161495011	chr1	+	161494860	161495002	True	NM_000569,NM_002155	chr1,chr1	-,+	FCGR3A,HSPA6	24866,-875
chr6:33289278-33289717	chr6_qbl_hap6	+	4521532	4521953	False	NM_001145338,NM_001350,NM_172208,NM_001185181,NM_005453,NM_172209,NM_001141970,NM_003190,NM_001141969	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,TAPBP,PFDN6,ZBTB22,TAPBP,DAXX,TAPBP,DAXX	-3566,1139,-7122,-31928,-3773,-7122,1139,-7122,1139
chr6:33289278-33289717	chr6_mcf_hap5	+	4763025	4763446	False	NM_001145338,NM_001350,NM_172208,NM_001185181,NM_005453,NM_172209,NM_001141970,NM_003190,NM_001141969	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,TAPBP,PFDN6,ZBTB22,TAPBP,DAXX,TAPBP,DAXX	-3563,1139,-7119,-31920,-3770,-7119,1139,-7119,1139
chr6:33289278-33289717	chr6_cox_hap2	+	4733099	4733520	False	NM_001145338,NM_001350,NM_172208,NM_001185181,NM_005453,NM_172209,NM_001141970,NM_003190,NM_001141969	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,TAPBP,PFDN6,ZBTB22,TAPBP,DAXX,TAPBP,DAXX	-3565,1141,-7123,-31924,-3772,-7123,1141,-7123,1141
chr6:33289278-33289717	chr6	+	33289283	33289704	True	NR_024517,NM_001350,NM_001145338,NM_172208,NM_001185181,NM_005453,NM_172209,NM_001141970,NM_003190,NM_001141969	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,-,+,-,-,-,-,-	DAXX,DAXX,ZBTB22,TAPBP,PFDN6,ZBTB22,TAPBP,DAXX,TAPBP,DAXX	1139,1139,-3564,-7119,-31922,-3771,-7119,1139,-7119,1139
chr6:33289278-33289717	chr6_dbb_hap3	+	4570608	4571029	False	NM_001145338,NM_001350,NM_172208,NM_001185181,NM_005453,NM_172209,NM_001141970,NM_003190,NM_001141969	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,TAPBP,PFDN6,ZBTB22,TAPBP,DAXX,TAPBP,DAXX	-3565,1141,-7121,-31921,-3772,-7121,1141,-7121,1141
chr3:11269265-11270404	chr3	+	11269354	11270305	True	NM_001098211,NM_001128221	chr3,chr3	+,-	HRH1,VGLL4	-1738,340143
chr2:135599737-135600873	chr2	+	135599740	135600707	True	NM_138326,NR_036549	chr2,chr2	+,-	ACMSD,LOC100129961	-3605,75528
chr17:17183796-17184027	chr17	+	17183874	17184072	True	NM_001199125,NM_003653,NM_020201	chr17,chr17,chr17	-,-,+	COPS3,COPS3,NT5M	-10,595,22607
chr12:6983748-6984050	chr12	+	6983883	6984035	True	NR_027483,NR_002803,NM_001146316,NM_001159287,NM_032641,NR_033796,NM_000365	chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,-,+,-,+,+	TPI1,RPL13P5,SPSB2,TPI1,SPSB2,DSTNP2,TPI1	-6657,9109,-1434,-7351,-1362,9810,-7242
chr15:38565975-38566853	chr15	+	38566007	38566564	True	NM_152594,NM_001128602	chr15,chr15	+,-	SPRED1,RASGRP1	-21007,290493
chr8:143833151-143833683	chr8	+	143833158	143833320	True	NM_016647,NM_020427,NM_205545	chr8,chr8,chr8	+,-,-	C8orf55,SLURP1,LYPD2	-24588,-9329,682
chr2:225268184-225269685	chr2	+	225268375	225269695	True	NM_022915,NM_001122779,NM_024785	chr2,chr2,chr2	+,-,-	MRPL44,FAM124B,FAM124B	-446305,-1664,-1664
chr17:19265940-19266228	chr17	+	19265952	19266212	True	NM_015681,NM_139032	chr17,chr17	-,+	B9D1,MAPK7	28,14821
chr5:162884296-162885147	chr5	+	162884564	162884903	True	NM_012484,NM_012485,NM_145266,NM_001142556,NM_001142557	chr5,chr5,chr5,chr5,chr5	+,+,-,+,+	HMMR,HMMR,NUDCD2,HMMR,HMMR	2613,2613,2299,2613,2613
chr17:33757224-33758487	chr17	+	33757438	33758505	True	NR_003037,NM_018042	chr17,chr17	+,-	SNORD7,SLFN12	142170,1095
chr11:66246998-66247410	chr11	+	66247101	66247343	True	NM_170739,NM_130443,NM_005700	chr11,chr11,chr11	-,+,+	MRPL11,DPP3,DPP3	-40791,536,536
chr12:54977015-54977497	chr12	+	54977024	54977480	True	NM_006741,NM_001165975	chr12,chr12	-,+	PPP1R1A,PDE1B	5013,-21976
chr8:36741619-36741973	chr8	+	36741655	36741963	True	NM_001031836,NR_003671	chr8,chr8	+,-	KCNU1,LOC728024	-99875,863651
chr20:40251912-40252231	chr20	+	40252215	40252279	True	NM_032221,NM_022896	chr20,chr20	-,+	CHD6,LPIN3	-5082,-282706
chr10:6375299-6375520	chr10	+	6375312	6375558	True	NM_004566,NM_006257	chr10,chr10	+,-	PFKFB3,PRKCQ	-130523,246730
chr3:136534498-136535021	chr3	+	136534525	136534737	True	NM_001097599,NM_005862,NM_001097600,NM_025246	chr3,chr3,chr3,chr3	+,-,+,+	TMEM22,STAG1,TMEM22,TMEM22	3123,-63280,3123,3123
chr19:49541527-49541741	chr19	+	49541567	49541637	True	NR_004383,NM_033378,NM_033377,NR_024244,NM_033043	chr19,chr19,chr19,chr19,chr19	+,+,-,-,+	SNAR-G1,CGB2,CGB1,SNAR-G2,CGB5	-1342,-6489,-1376,-6523,5464
chr22:25002842-25003208	chr22	+	25002876	25003252	True	NM_005265,NM_207644,NM_001032365,NM_001032364	chr22,chr22,chr22,chr22	+,-,+,+	GGT1,C22orf36,GGT1,GGT1	-3747,-13841,373,-3803
chr22:25002842-25003208	chr22	-	24013576	24013952	False	NM_153615,NM_016449	chr22,chr22	+,-	RGL4,C22orf43	19095,-39068
chr22:25002842-25003208	chr2	+	91959911	91960181	False	NR_003503,NR_027238	chr2,chr2	+,-	GGT8P,LOC654342	3186,-111936
chr11:77784770-77785513	chr11	+	77784868	77785383	True	NM_001204054,NM_001204055,NM_003251,NM_001203260,NM_001203261,NM_001203262,NM_004549	chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,+,-,-,-,-	NDUFC2,NDUFC2,THRSP,NDUFC2-KCTD14,NDUFC2-KCTD14,NDUFC2-KCTD14,NDUFC2	5934,5934,-10019,5934,5934,5934,5934
chr8:48173795-48175296	chr8	+	48173903	48175328	True	NM_005195,NM_001080394	chr8,chr8	-,+	CEBPD,KIAA0146	475449,-412
chr19:372925-373423	chr19	+	372983	373224	True	NM_016585,NM_130760,NM_199202	chr19,chr19,chr19	-,+,-	THEG,MADCAM1,THEG	2846,123265,2846
chr21:18885976-18886759	chr21	+	18886076	18886798	True	NM_001130914,NM_001338	chr21,chr21	-,+	BTG3,CXADR	98521,-797
chr19:51980818-51981175	chr19	+	51980867	51981146	True	NM_001080405,NM_014442	chr19,chr19	+,-	CEACAM18,SIGLEC8	-1080,-19159
chr8:143695217-143695434	chr8	+	143695261	143695413	True	NM_015193,NR_033343	chr8,chr8	-,+	ARC,PSCA	470,56312
chr2:238874099-238874310	chr2	+	238874098	238874166	True	NM_080678,NR_037904,NM_030768	chr2,chr2,chr2	+,+,-	UBE2F,UBE2F-SCLY,ILKAP	1420,1420,238212
chr8:103919936-103920913	chr8	+	103919979	103920649	True	NM_148174,NM_001695	chr8,chr8	-,+	AZIN1,ATP6V1C1	-43582,112598
chr20:18036403-18036780	chr20	+	18036512	18036774	True	NM_021220,NM_001164811	chr20,chr20	-,+	OVOL2,PET117	1797,81724
chr19:35850633-35850838	chr19	+	35850635	35850815	True	NM_005303,NM_207392,NM_005304	chr19,chr19,chr19	+,-,+	FFAR1,KRTDAP,FFAR3	-8241,130591,-1198
chr19:35850633-35850838	chr19	+	35863104	35863284	False	NM_207392,NM_005304	chr19,chr19	-,+	KRTDAP,FFAR3	118122,-13667
chr5:133989567-133990002	chr5	+	133989672	133989734	True	NM_021982,NM_016103	chr5,chr5	+,-	SEC24A,SAR1B	-5250,-21139
chr19:41724282-41724882	chr19	+	41724342	41724668	True	NM_001699,NM_000660,NM_021913	chr19,chr19,chr19	+,-,+	AXL,TGFB1,AXL	439,135213,439
chr10:47086653-47087496	chr10	+	47086713	47087405	True	NR_003277,NM_005972	chr10,chr10	-,+	LOC728643,PPYR1	46481,-3230
chr6:69344574-69344902	chr6	+	69344578	69344834	True	NM_018368,NM_001704	chr6,chr6	-,+	LMBRD1,BAI3	1162265,797
chr2:166485296-166485653	chr2	+	166485478	166485684	True	NM_004482,NM_024969	chr2,chr2	-,+	GALNT3,CSRNP3	165181,-56686
chr16:31412082-31413355	chr16	+	31412231	31413167	True	NM_005353,NM_005205	chr16,chr16	+,-	ITGAD,COX6A2	-7649,26632
chr17:48447920-48448444	chr17	+	48447959	48448357	True	NM_152463,NM_001166131,NM_016504	chr17,chr17,chr17	+,+,-	EME1,EME1,MRPL27	2223,2223,2255
chr6:86304247-86304566	chr6	+	86304278	86304605	True	NM_153816,NM_002526,NM_020468	chr6,chr6,chr6	-,+,-	SNX14,NT5E,SNX14	-649,-145027,-649
chr5:150836124-150836571	chr5	+	150836157	150836597	True	NM_078483,NM_181776	chr5,chr5	+,-	SLC36A1,SLC36A2	-9054,-109006
chr15:50839868-50841353	chr15	+	50840142	50840829	True	NM_005154,NM_203494	chr15,chr15	+,-	USP8,USP50	-123615,-1240
chr8:67585644-67586390	chr8	+	67585862	67586216	True	NM_019607,NM_001204173,NM_025054	chr8,chr8,chr8	+,+,-	C8orf44,C8orf44-SGK3,VCPIP1	-6127,-6127,-6410
chr2:223521096-223523069	chr2	+	223521293	223522812	True	NM_058165,NM_005687	chr2,chr2	+,-	MOGAT1,FARSB	13644,-466
chr5:149546041-149546245	chr5	+	149546045	149546129	True	NM_001804,NM_002609	chr5,chr5	+,-	CDX1,PDGFRB	214,-10623
chr10:60027831-60028039	chr10	+	60028005	60028085	True	NM_018464,NM_152230	chr10,chr10	+,-	CISD1,IPMK	809,-311
chr7:43964650-43965880	chr7	+	43964866	43965729	True	NM_001077664,NM_015983	chr7,chr7	-,+	URGCP,UBE2D4	318,305
chr1:110996694-110997969	chr1	+	110997008	110997804	True	NM_032414,NM_006402	chr1,chr1	+,-	PROK1,HBXIP	-3271,-46462
chr11:120193902-120194268	chr11	+	120193904	120194304	True	NM_001198674,NM_001198675,NM_001198672,NM_001198673,NM_001198670,NM_001198671,NM_012101,NM_174926	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,+,-,+	TMEM136,TMEM136,TMEM136,TMEM136,TMEM136,TMEM136,TRIM29,TMEM136	1533,1533,1533,1533,1533,1533,-185041,1533
chr15:25438444-25439159	chr15	+	25438449	25439183	True	NR_003308,NR_003358,NR_003311,NR_003310,NM_130838,NR_003297,NR_003344,NR_003309,NR_003351,NR_003300,NR_003301,NR_003302,NR_003303,NR_003304,NR_003305,NR_003306	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,-,+,+,+,+,+,+,+,+,+,+,+	SNORD115-16,SNORD115-43,SNORD115-19,SNORD115-18,UBE3A,SNORD115-5,SNORD115-29,SNORD115-17,SNORD115-36,SNORD115-8,SNORD115-9,SNORD115-10,SNORD115-11,SNORD115-12,SNORD115-13,SNORD115-14	5411,-3939,7286,7286,211520,-1934,-3939,7286,-3939,-9047,-1937,-1937,-3939,-1937,-32,884
chr11:5008807-5009199	chr11	+	5008939	5009243	True	NM_021801,NM_001004748	chr11,chr11	+,-	MMP26,OR51A2	180,-31996
chr17:61027736-61028358	chr17	+	61027745	61028374	True	NM_152598,NM_025185	chr17,chr17	-,+	MARCH10,TANC2	-142040,58523
chr4:146098841-146099681	chr4	+	146098841	146099574	True	NM_002940,NM_017493,NM_001102653	chr4,chr4,chr4	+,-,-	ABCE1,OTUD4,OTUD4	-79736,-2945,1311
chr2:242573268-242574228	chr2	+	242573408	242574074	True	NM_015963,NM_013325,NM_178326	chr2,chr2,chr2	-,+,+	THAP4,ATG4B,ATG4B	2701,2952,2952
chrX:54520355-54521524	chrX	+	54520566	54521523	True	NM_004463,NM_001184819	chrX,chrX	-,+	FGD1,GNL3L	1126,35120
chr3:132757416-132757794	chr3	+	132757418	132757776	True	NM_153240,NM_023943,NM_001136469	chr3,chr3,chr3	-,+,+	NPHP3,TMEM108,TMEM108	-316115,-298,-298
chr12:2985583-2986019	chr12	+	2985634	2985978	True	NM_202003,NM_202002,NR_027365,NR_027363,NM_021953,NR_027364	chr12,chr12,chr12,chr12,chr12,chr12	-,-,+,+,-,+	FOXM1,FOXM1,C12orf32,C12orf32,FOXM1,C12orf32	375,375,386,386,375,386
chr4:129732321-129732548	chr4	+	129732325	129732387	True	NM_199320,NM_024900,NM_144643	chr4,chr4,chr4	+,+,-	PHF17,PHF17,SCLT1	-1597,-1597,282427
chr7:27240771-27241157	chr7	+	27240786	27241167	True	NM_000522,NR_037843	chr7,chr7	-,+	HOXA13,NCRNA00213	-1061,-781
chr12:6454178-6454995	chr12	+	6454218	6455010	True	NM_001144857,NM_001065	chr12,chr12	+,-	PLEKHG6,TNFRSF1A	-32452,-2935
chr1:159262105-159263017	chr1	+	159262165	159263037	True	NM_001004467,NM_002001	chr1,chr1	-,+	OR10J3,FCER1A	21462,-2719
chr17:16472755-16473776	chr17	+	16472852	16473755	True	NM_014695,NM_020653	chr17,chr17	+,-	CCDC144A,ZNF287	119883,-332
chr19:58239001-58239325	chr19	+	58239058	58239233	True	NM_173632,NM_024833	chr19,chr19	+,-	ZNF776,ZNF671	18930,-63
chr19:40946883-40947567	chr19	+	40947010	40947548	True	NM_013368,NM_020971,NM_203344	chr19,chr19,chr19	-,+,-	SERTAD3,SPTBN4,SERTAD3	1007,25577,2784
chr19:51140635-51141267	chr19	+	51140640	51141308	True	NM_001160328,NM_001195076,NM_001160329,NM_032298	chr19,chr19,chr19,chr19	-,+,-,-	SYT3,LOC342918,SYT3,SYT3	1834,11393,1834,44
chr9:99801237-99801505	chr9	+	99801242	99801468	True	NM_001333,NM_001045477,NM_001201575	chr9,chr9,chr9	-,+,-	CTSL2,FAM22G,CTSL2	174,-110007,507
chr19:11449892-11450163	chr19	+	11449938	11450188	True	NM_001080503,NM_001145416,NM_033408,NM_004283,NM_198536	chr19,chr19,chr19,chr19,chr19	+,-,-,-,-	CCDC159,TMEM205,TMEM205,RAB3D,TMEM205	6992,6843,6843,206,6843
chr8:82397331-82397710	chr8	+	82397393	82397737	True	NM_001444,NM_001442	chr8,chr8	+,-	FABP5,FABP4	-204733,-1920
chr11:89487163-89487900	chr11	+	89487162	89487686	True	NM_001146162,NM_020358	chr11,chr11	+,-	TRIM77,TRIM49	-43749,54107
chr11:89487163-89487900	chr11	-	89819036	89819089	False	NM_001143975,NR_028346	chr11,chr11	+,-	UBTFL1,TRIM53	28,-83360
chr11:3862600-3862929	chr11	+	3862677	3862805	True	NM_001665,NM_003156	chr11,chr11	-,+	RHOG,STIM1	-464,14127
chr1:160926308-160926978	chr1	+	160926602	160927026	True	NM_080878,NR_033385	chr1,chr1	-,+	ITLN2,KLHDC9	-2013,141124
chr17:42246498-42247108	chr17	+	42246757	42246867	True	NM_178542,NM_080863	chr17,chr17	-,+	C17orf65,ASB16	17265,1206
chr16:767659-767888	chr16	+	767742	767916	True	NM_001031737,NM_024042,NM_032304,NM_023933	chr16,chr16,chr16,chr16	-,+,+,+	CCDC78,METRN,HAGHL,FAM173A	8607,-2620,9349,3241
chr2:213941518-213942470	chr2	+	213941725	213942179	True	NM_016260,NM_001025436	chr2,chr2	-,+	IKZF2,SPAG16	72941,206936
chr12:52712875-52714564	chr12	+	52713062	52714506	True	NM_002284,NM_002282	chr12,chr12	+,-	KRT86,KRT83	-17464,726
chr19:52230773-52231267	chr19	+	52230817	52231069	True	NM_001523,NM_001005738	chr19,chr19	-,+	HAS1,FPR2	-3596,33383
chr2:170346862-170348465	chr2	+	170347013	170348280	True	NM_152384,NM_024622	chr2,chr2	+,-	BBS5,FASTKD1	-11068,82203
chr7:75124557-75125078	chr7	+	75124754	75124826	True	NM_001099415,NM_001099435	chr7,chr7	-,+	POM121C,SPDYE5	-9186,-506
chr5:140865544-140866350	chr5	+	140865662	140866338	True	NM_032406,NM_032407,NM_018929,NM_018928,NM_001079812	chr5,chr5,chr5,chr5,chr5	+,+,+,+,-	PCDHGC4,PCDHGC5,PCDHGC5,PCDHGC4,DIAPH1	-973,2469,2469,-973,132334
chr3:127677374-127677793	chr3	+	127677376	127677834	True	NM_001003794,NM_207335	chr3,chr3	-,+	MGLL,KBTBD12	-135325,-35526
chr9:130478304-130478524	chr9	+	130478343	130478477	True	NM_001002913,NM_144965,NM_001012502	chr9,chr9,chr9	-,+,+	PTRH1,TTC16,C9orf117	-407,-36,-9123
chr1:52198921-52199167	chr1	+	52198973	52199117	True	NR_031580,NM_148905,NM_148904,NM_148907	chr1,chr1,chr1,chr1	-,+,+,+	MIR761,OSBPL9,OSBPL9,OSBPL9	103007,-3548,-3548,-3548
chr2:128402442-128403004	chr2	+	128402501	128403019	True	NM_005291,NR_027823,NM_001161416,NM_001161417,NM_001161415	chr2,chr2,chr2,chr2,chr2	+,-,+,+,+	GPR17,LIMS2,GPR17,GPR17,GPR17	419,2784,419,419,419
chr18:66533742-66534169	chr18	+	66533745	66534207	True	NM_024781,NM_019022	chr18,chr18	+,-	CCDC102B,TMX3	-68479,-151392
chr9:130829695-130830022	chr9	+	130829712	130830010	True	NM_197956,NM_001006641	chr9,chr9	-,+	NAIF1,SLC25A25	-113,468
chr1:47400874-47401733	chr1	+	47400946	47401782	True	NM_000778,NM_178033	chr1,chr1	-,+	CYP4A11,CYP4X1	5424,87457
chr1:47400874-47401733	chr1	-	47608514	47609313	False	NM_005764,NM_001010969	chr1,chr1	-,+	PDZK1IP1,CYP4A22	46515,-5477
chr10:74032491-74032793	chr10	+	74032529	74032785	True	NM_001198800,NM_019058	chr10,chr10	-,+	ASCC1,DDIT4	-56346,891
chr1:26515009-26515555	chr1	+	26515027	26515595	True	NM_198137,NM_001077262	chr1,chr1	+,-	CATSPER4,UBXN11	1523,117650
chr6:15977773-15978169	chr6	+	15977802	15978104	True	NM_013262,NR_036448	chr6,chr6	+,-	MYLIP,DTNBP1	151212,-314513
chr2:85131765-85132460	chr2	+	85131891	85132449	True	NM_021103,NM_001080824	chr2,chr2	+,-	TMSB10,C2orf89	313,-23639
chr12:123719101-123720330	chr12	+	123719405	123720259	True	NM_001143905,NM_001194995,NM_022782,NM_152269	chr12,chr12,chr12,chr12	+,+,-,+	C12orf65,C12orf65,MPHOSPH9,C12orf65	-1177,-1440,-12964,-1624
chr8:67781746-67782914	chr8	+	67782061	67782927	True	NR_002598,NM_173518,NM_001136160,NM_001136161	chr8,chr8,chr8,chr8	-,+,+,+	SNORD87,C8orf45,C8orf45,C8orf45	51907,56,809,56
chr5:118403831-118404436	chr5	+	118403996	118404253	True	NM_173666,NM_005509	chr5,chr5	-,+	DTWD2,DMXL1	-79756,2830
chr9:37118815-37119194	chr9	+	37118903	37119157	True	NM_016734,NM_032226	chr9,chr9	-,+	PAX5,ZCCHC7	-84427,1311
chr10:43248988-43249207	chr10	+	43249032	43249160	True	NM_014753,NM_006955	chr10,chr10	+,-	BMS1,ZNF33B	28793,-115040
chr9:71152229-71153176	chr9	+	71152423	71153215	True	NM_153237,NM_003558	chr9,chr9	-,+	C9orf71,PIP5K1B	2618,167400
chr14:89032382-89033618	chr14	+	89032729	89033438	True	NM_207660,NM_207661,NM_001160104,NM_001160103,NM_007039,NM_024824	chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,+,-,+	ZC3H14,ZC3H14,ZC3H14,ZC3H14,PTPN21,ZC3H14	-3535,-3097,-3535,-3535,-11606,-3535
chr11:2424313-2424644	chr11	+	2424340	2424412	True	NM_005706,NM_014555	chr11,chr11	+,-	TSSC4,TRPM5	-868,19913
chrX:154253075-154253625	chrX	+	154253135	154253587	True	NM_023934,NM_000132	chrX,chrX	+,-	FUNDC2,F8	1476,-2137
chr9:124029428-124030201	chr9	+	124029491	124030115	True	NM_198252,NM_001127663,NM_001127662,NM_016322,NM_001127667,NM_001127666,NM_001127665,NM_001127664	chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9	+,+,+,-,+,+,+,+	GSN,GSN,GSN,RAB14,GSN,GSN,GSN,GSN	264,264,264,-65126,264,264,264,264
chr5:140744981-140745428	chr5	+	140744981	140745465	True	NM_018924,NM_032086,NM_032097,NM_018923,NM_032096,NM_032054,NM_018918,NM_018919,NM_005642	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,+,+,-	PCDHGB3,PCDHGA6,PCDHGB3,PCDHGB2,PCDHGB2,PCDHGA5,PCDHGA5,PCDHGA6,TAF7	4496,8185,4496,-5329,-5329,-1134,-1134,8185,-44630
chr3:150159266-150160408	chr3	+	150159561	150160291	True	NM_014445,NM_014779	chr3,chr3	-,+	SERP1,TSC22D2	104194,-32837
chr1:48346272-48346868	chr1	+	48346422	48346838	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	115774,341518
chr6:84419100-84419350	chr6	+	84419169	84419387	True	NR_026669,NM_014841,NM_001009994	chr6,chr6,chr6	-,-,+	SNAP91,SNAP91,RIPPLY2	-42,-42,143597
chr10:46896908-46897409	chr10	+	46897045	46897459	True	NR_027632,NM_181519	chr10,chr10	+,-	FAM35B,SYT15	181,73196
chr10:46896908-46897409	chr10	+	49086795	49087209	False	NM_001137548,NM_002750	chr10,chr10	-,+	FAM25C,MAPK8	120670,522477
chr10:46896908-46897409	chr10	+	47379125	47379539	False	NR_024495,NR_027634	chr10,chr10	-,+	LOC642826,FAM35B2	-135631,180
chr22:46664877-46665103	chr22	+	46664886	46664962	True	NM_006071,NM_017931	chr22,chr22	-,+	PKDREJ,TTC38	-5667,-1077
chrX:135254346-135255185	chrX	+	135254366	135254759	True	NM_001159704,NM_001173517,NM_001167819	chrX,chrX,chrX	+,-,+	FHL1,MAP7D3,FHL1	-2972,79029,-2631
chr5:150835290-150836124	chr5	+	150835352	150836092	True	NM_078483,NM_181776	chr5,chr5	+,-	SLC36A1,SLC36A2	-8247,-108201
chr8:22458298-22458551	chr8	+	22458466	22458580	True	NM_001013842,NM_173686,NR_027715,NM_021174,NR_033902,NM_001198827	chr8,chr8,chr8,chr8,chr8,chr8	+,+,-,+,+,+	C8orf58,C8orf58,FLJ14107,KIAA1967,KIAA1967,C8orf58	-1403,-1403,41192,3958,3564,-1403
chr9:95288094-95289165	chr9	+	95288294	95288502	True	NR_036505,NM_001197295,NM_001393,NM_001197296	chr9,chr9,chr9,chr9	+,-,-,-	LOC100128361,ECM2,ECM2,ECM2	91829,9922,9922,9922
chr6:143417336-143418577	chr6	+	143417573	143418631	True	NM_016108,NM_006734	chr6,chr6	+,-	AIG1,HIVEP2	-35612,-151235
chr14:70041539-70042463	chr14	+	70041625	70042482	True	NR_024630,NM_014734	chr14,chr14	-,+	C14orf162,KIAA0247	-3707,35827
chr15:53095982-53096234	chr15	+	53095981	53096101	True	NM_004498,NM_002748	chr15,chr15	-,+	ONECUT1,MAPK6	-13772,-784621
chr3:186916446-186917126	chr3	+	186916511	186917055	True	NM_052969,NM_153708	chr3,chr3	-,+	RPL39L,RTP1	-59248,-1292
chr1:156720638-156720864	chr1	+	156720637	156720826	True	NM_001126051,NM_145729,NM_005973,NM_004494,NM_001126050,NM_024540	chr1,chr1,chr1,chr1,chr1,chr1	-,-,+,-,-,-	HDGF,MRPL24,PRCC,HDGF,HDGF,MRPL24	1248,-9714,16447,767,1464,-9714
chr1:22968640-22969957	chr1	+	22968785	22969841	True	NR_036214,NM_172369,NM_015991,NM_001114101,NM_000491	chr1,chr1,chr1,chr1,chr1	-,+,+,+,+	MIR4253,C1QC,C1QA,C1QC,C1QB	219928,276,-5718,276,9840
chr11:110323083-110323984	chr11	+	110323261	110323737	True	NM_002906,NM_004109	chr11,chr11	-,+	RDX,FDX1	-155824,-22719
chr22:30987718-30988345	chr22	+	30987922	30988394	True	NM_000355,NM_014303	chr22,chr22	+,-	TCN2,PES1	14675,-28
chr6:164723126-164723589	chr6	+	164723140	164723610	True	NM_206855,NR_037593	chr6,chr6	+,-	QKI,LOC100526820	-887524,-888158
chr7:93201842-93202741	chr7	+	93201927	93202781	True	NM_001164737,NM_001742,NM_021955	chr7,chr7,chr7	-,-,+	CALCR,CALCR,GNGT1	1311,1311,333038
chr19:31841968-31842171	chr19	+	31842158	31842220	True	NM_020856,NR_026894	chr19,chr19	-,+	TSHZ3,DKFZp566F0947	-1968,-201426
chr1:201366491-201368321	chr1	+	201366599	201368087	True	NM_005558,NM_001005337	chr1,chr1	-,+	LAD1,PKP1	632,-114070
chr5:140730391-140731047	chr5	+	140730407	140731048	True	NM_032095,NM_018923,NM_018922,NM_032096,NM_005642,NM_032053,NM_032011,NM_018916,NM_018917	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,-,+,+,+,+	PCDHGB1,PCDHGB2,PCDHGB1,PCDHGB2,TAF7,PCDHGA4,PCDHGA3,PCDHGA3,PCDHGA4	-630,8654,-630,8654,-30056,3719,-6857,-6857,3719
chr13:46418520-46420315	chr13	+	46418694	46420153	True	NM_198849,NM_152719	chr13,chr13	-,+	SIAH3,SPERT	5743,-142299
chr7:128767742-128767955	chr7	+	128767942	128768002	True	NR_002144,NR_034053	chr7,chr7	+,-	LOC407835,TNPO3	-1668,-72715
chr7:50776140-50777111	chr7	+	50776146	50776916	True	NR_033845,NM_001001550	chr7,chr7	+,-	LOC100129427,GRB10	-176740,-3148
chr5:140762738-140763039	chr5	+	140762742	140763058	True	NM_032086,NM_032087,NM_003736,NM_032098,NM_032088,NM_018919,NM_005642,NM_014004,NM_018920	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,-,+,+	PCDHGA6,PCDHGA7,PCDHGB4,PCDHGB4,PCDHGA8,PCDHGA6,TAF7,PCDHGA8,PCDHGA7	-9142,-326,4393,4393,8424,-9142,-62391,8424,-326
chr10:65283470-65284362	chr10	+	65283591	65284187	True	NM_032776,NM_001001330	chr10,chr10	-,+	JMJD1C,REEP3	-57869,-2521
chr2:167984509-167985055	chr2	+	167984628	167985050	True	NM_002976,NM_001199144	chr2,chr2	-,+	SCN7A,XIRP2	-641150,58742
chr10:88731629-88731856	chr10	+	88731669	88731869	True	NM_024756,NM_133447,NM_006829	chr10,chr10,chr10	-,+,+	MMRN2,AGAP11,C10orf116	-14244,-1222,-3532
chr19:41723272-41724282	chr19	+	41723676	41724002	True	NM_001699,NM_000660,NM_021913	chr19,chr19,chr19	+,-,+	AXL,TGFB1,AXL	1105,135879,1105
chr5:140065677-140067053	chr5	+	140066112	140066746	True	NM_012208,NM_002109	chr5,chr5	+,-	HARS2,HARS	4271,4275
chr5:137070384-137070958	chr5	+	137070412	137070914	True	NM_017415,NR_002713	chr5,chr5	-,+	KLHL3,NPY6R	915,65967
chr7:74989609-74990448	chr7	+	74989887	74990505	True	NR_003614,NM_001002840,NM_018991	chr7,chr7,chr7	-,+,+	PMS2L2,STAG3L1,STAG3L1	-1672,-1504,-1504
chr7:74989609-74990448	chr7	+	99935602	99935663	False	NR_036570,NR_003613,NR_036569	chr7,chr7,chr7	+,-,+	PILRB,PMS2P1,PILRB	-1976,-1672,-1976
chr7:74989609-74990448	chr7	-	72474391	72475009	False	NM_001013739,NR_003614	chr7,chr7	-,+	STAG3L3,PMS2L2	1509,1670
chr7:74989609-74990448	chr7	-	74304656	74305274	False	NR_027777,NR_027776,NM_001025202,NR_027775	chr7,chr7,chr7,chr7	+,+,-,+	PMS2P5,PMS2P5,STAG3L2,PMS2P5	1619,1619,1520,1619
chr5:140723872-140724376	chr5	+	140723886	140724354	True	NM_032095,NM_018922,NM_005642,NM_032009,NM_032011,NM_018915,NM_018916	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,-,+,+,+,+	PCDHGB1,PCDHGB1,TAF7,PCDHGA2,PCDHGA3,PCDHGA2,PCDHGA3	5473,5473,-23535,-5592,-345,-5592,-345
chr9:133539666-133540002	chr9	+	133539703	133539839	True	NR_027440,NM_021619	chr9,chr9	-,+	LOC100272217,PRDM12	-84822,141
chr1:151128498-151129060	chr1	+	151128599	151129087	True	NM_024575,NM_001204848,NM_030913,NM_001204856,NR_037937,NM_024041,NM_001136543,NM_001178061,NM_212551,NM_001178062	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,+,+,+,-,-,-,-	TNFAIP8L2,TNFAIP8L2-SCNM1,SEMA6C,SCNM1,SCNM1,SCNM1,LYSMD1,SEMA6C,LYSMD1,SEMA6C	17,17,-9459,9410,9410,9410,9387,-9459,9333,-9459
chr11:118981260-118982031	chr11	+	118981468	118982076	True	NM_014807,NM_001382	chr11,chr11	+,-	C2CD2L,DPAGT1	-3426,-8683
chr22:19950052-19950254	chr22	+	19950142	19950300	True	NM_006440,NM_007310	chr22,chr22	-,+	TXNRD2,COMT	-20783,-123
chr17:40758729-40759678	chr17	+	40759050	40759216	True	NM_001070,NR_026697,NM_178126	chr17,chr17,chr17	+,-,-	TUBG1,FAM134C,FAM134C	2141,2279,2279
chr1:92414862-92415110	chr1	+	92414920	92415095	True	NM_207189,NM_001195684,NM_001726	chr1,chr1,chr1	+,-,+	BRDT,TGFBR3,BRDT	-43,-43361,2613
chr1:151254839-151255075	chr1	+	151254842	151255087	True	NM_020832,NM_001198773	chr1,chr1	+,-	ZNF687,PI4KB	-102,45096
chrX:35943154-35943932	chrX	+	35943590	35943769	True	NM_152632,NM_031442	chrX,chrX	+,-	CXorf22,TMEM47	-5805,-1268185
chr11:129901545-129902875	chr11	+	129901544	129902854	True	NM_199437,NR_024233	chr11,chr11	-,+	PRDM10,NCRNA00167	-28814,-29082
chr21:34776016-34776251	chr21	+	34776047	34776107	True	NM_005534,NM_006134	chr21,chr21	+,-	IFNGR2,TMEM50B	-896,76224
chr1:159926181-159926766	chr1	+	159926273	159926636	True	NM_033438,NM_001146172,NM_001146173,NM_004983	chr1,chr1,chr1,chr1	-,-,-,+	SLAMF9,SLAMF9,SLAMF9,KCNJ9	-2229,-2229,-2229,124723
chr1:19231366-19231797	chr1	+	19231514	19231796	True	NM_170726,NM_001135254,NM_003748	chr1,chr1,chr1	-,+,-	ALDH4A1,PAX7,ALDH4A1	-2221,-274067,-2221
chr5:179159531-179159737	chr5	+	179159560	179159720	True	NM_014757,NM_001164444	chr5,chr5	+,-	MAML1,CBY3	130,-51585
chr13:111974193-111975227	chr13	+	111974317	111975221	True	NM_152324,NM_017664	chr13,chr13	+,-	C13orf16,ANKRD10	-1353,-406901
chr9:131788751-131789263	chr9	+	131788992	131789224	True	NM_020145,NM_032809	chr9,chr9	-,+	SH3GLB2,FAM73B	1405,10028
chrX:44402066-44402270	chrX	+	44402118	44402280	True	NM_022076,NM_173794	chrX,chrX	+,-	DUSP21,FUNDC1	300968,-1
chr15:74466127-74466694	chr15	+	74466306	74466670	True	NM_001199042,NM_201526,NM_005545	chr15,chr15,chr15	-,+,+	STRA6,ISLR,ISLR	28600,234,-270
chr18:67957020-67957291	chr18	+	67957029	67957309	True	NM_173630,NM_004232	chr18,chr18	-,+	RTTN,SOCS6	-84067,-943
chr18:13026417-13028099	chr18	+	13026660	13027980	True	NM_002828,NM_032142	chr18,chr18	-,+	PTPN2,CEP192	-142326,-35350
chr5:70750882-70751634	chr5	+	70751045	70751459	True	NM_018429,NR_033968	chr5,chr5	+,-	BDP1,LOC100049076	-18,-195923
chr19:10564566-10564783	chr19	+	10564617	10564829	True	NM_006202,NM_012289	chr19,chr19	+,-	PDE4A,KEAP1	-1035,48702
chr15:31745214-31745635	chr15	+	31745358	31745654	True	NM_015995,NM_130901	chr15,chr15	+,-	KLF13,OTUD7A	-126326,201938
chr1:1246666-1246882	chr1	+	1246733	1246915	True	NM_030649,NM_153339	chr1,chr1	-,+	ACAP3,PUSL1	-3464,-2790
chr18:21246095-21247911	chr18	+	21246248	21247746	True	NM_001127717,NM_173505	chr18,chr18	+,-	LAMA3,ANKRD29	21815,-3399
chrX:99194366-99195001	chrX	+	99194380	99195036	True	NM_022144,NR_024608	chrX,chrX	+,-	TNMD,LOC442459	644753,-73
chr16:66967185-66967494	chr16	+	66967187	66967379	True	NM_003869,NM_016062,NM_198061,NM_001128850,NM_004165,NR_024525,NR_036684	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,-,+,-,-,-,+	CES2,FAM96B,CES2,RRAD,RRAD,FAM96B,CES2	967,991,967,-7748,-7748,991,994
chr19:7540887-7541639	chr19	+	7541199	7541655	True	NR_024491,NM_198534	chr19,chr19	-,+	LOC100128573,C19orf45	-2952,20789
chr12:78260933-78261358	chr12	+	78261017	78261099	True	NM_203394,NM_014903	chr12,chr12	-,+	E2F7,NAV3	-801657,-36003
chr7:72745136-72746160	chr7	+	72745220	72745766	True	NM_001135211,NM_003602,NM_178125	chr7,chr7,chr7	+,+,-	FKBP6,FKBP6,TRIM50	-3116,-2971,-3135
chr10:71819699-71821423	chr10	+	71819747	71821464	True	NM_018649,NM_001198696	chr10,chr10	+,-	H2AFY2,AIFM2	-7441,71276
chr20:57877845-57878672	chr20	+	57877944	57878672	True	NR_037930,NM_207033,NM_207032,NM_000114,NM_207034	chr20,chr20,chr20,chr20,chr20	-,+,+,+,+	SLMO2-ATP5E,EDN3,EDN3,EDN3,EDN3	-260043,-2496,-2496,-2496,-2496
chrX:37021672-37022825	chrX	+	37021717	37022838	True	NM_006520,NM_001013736	chrX,chrX	-,+	DYNLT3,FAM47C	684110,3593
chr4:32105163-32105626	chr4	+	32105318	32105667	True	NM_015230,NM_032457	chr4,chr4	-,+	ARAP2,PCDH7	4140363,-1383340
chr4:77053260-77054617	chr4	+	77053264	77054175	True	NM_001179,NM_017426	chr4,chr4	+,-	ART3,NUP54	-57461,15530
chr7:30519847-30520064	chr7	+	30519909	30520093	True	NM_006092,NR_002186	chr7,chr7	-,+	NOD1,DKFZP586I1420	-1516,-110294
chr19:2309096-2309431	chr19	+	2309118	2309318	True	NM_001101391,NM_001077238	chr19,chr19	-,+	LINGO3,SPPL2B	-962,19310
chr1:158974726-158976204	chr1	+	158974844	158975852	True	NM_004833,NM_005531	chr1,chr1	-,+	AIM2,IFI16	70845,3829
chr17:56623061-56623355	chr17	+	56623087	56623247	True	NM_001198713,NM_001038704,NM_002876	chr17,chr17,chr17	-,-,+	SEPT4,C17orf47,RAD51C	-4908,-1404,146715
chr12:56525347-56526757	chr12	+	56525556	56526577	True	NM_015292,NM_001130420,NM_001184796	chr12,chr12,chr12	+,-,+	ESYT1,SMARCC2,ESYT1	-3621,56825,-3621
chr1:153234502-153235868	chr1	+	153234767	153235854	True	NM_052891,NM_000427	chr1,chr1	-,+	PGLYRP3,LOR	47390,-2646
chr7:73705215-73705718	chr7	+	73705342	73705758	True	NM_181471,NM_003388,NM_032421	chr7,chr7,chr7	-,+,+	RFC2,CLIP2,CLIP2	-36604,-1588,-1588
chr5:143191769-143192356	chr5	+	143191935	143192267	True	NM_021182,NM_001024947	chr5,chr5	+,-	HMHB1,YIPF5	-260,358061
chr2:75428093-75429269	chr2	+	75428127	75429312	True	NM_015727,NM_019896,NM_001058	chr2,chr2,chr2	-,+,-	TACR1,POLE4,TACR1	-1482,-242403,-1482
chr12:58335507-58335719	chr12	+	58335613	58335687	True	NM_005730,NM_033276	chr12,chr12	-,+	CTDSP2,XRCC6BP1	-94866,-219
chr12:77460029-77461050	chr12	+	77460101	77460751	True	NM_203394,NM_015336	chr12,chr12	-,+	E2F7,ZDHHC17	-741,-302306
chr19:54372888-54373116	chr19	+	54372915	54373103	True	NM_138373,NM_144687,NM_001020821,NM_001020820,NM_001020818,NM_001020819	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+	MYADM,NLRP12,MYADM,MYADM,MYADM,MYADM	-1829,-45267,-306,-3355,-185,-1829
chr1:32230249-32231406	chr1	+	32230264	32231360	True	NM_001703,NR_036216,NM_001525	chr1,chr1,chr1	-,-,+	BAI2,MIR4254,HCRTR1	-616,-5928,-147014
chr9:139378001-139378265	chr9	+	139378054	139378136	True	NM_152571,NM_014866	chr9,chr9	+,-	C9orf163,SEC16A	-163,-547
chr3:46786209-46788163	chr3	+	46786334	46787953	True	NM_001205271,NM_199183,NM_147196	chr3,chr3,chr3	-,-,+	PRSS46,PRSS45,TMIE	-8413,-89,-43562
chr16:9055937-9056409	chr16	+	9056002	9056350	True	NM_003470,NM_014117	chr16,chr16	-,+	USP7,C16orf72	1041,129186
chr19:44334029-44334741	chr19	+	44334173	44334779	True	NM_182573,NM_181845	chr19,chr19	-,+	LYPD5,ZNF283	-9365,-2751
chr3:148584702-148585148	chr3	+	148584853	148585193	True	NM_001870,NM_003071	chr3,chr3	+,-	CPA3,HLTF	-1869,219198
chr16:449205-450067	chr16	+	449319	449963	True	NM_005009,NM_021259,NM_020664	chr16,chr16,chr16	+,-,+	NME4,TMEM8A,DECR2	-2178,-17369,1894
chr6:7384469-7384720	chr6	+	7384550	7384731	True	NM_205864,NM_031480,NM_001170692,NM_001170693	chr6,chr6,chr6,chr6	-,+,-,-	CAGE1,RIOK1,CAGE1,CAGE1	5264,5330,5264,5264
chr7:158799732-158800049	chr7	+	158799812	158800046	True	NM_003382	chr7	-	VIPR2	137653
chr17:57231424-57231865	chr17	+	57231463	57231854	True	NM_182620,NR_029842,NM_018304,NM_001100595	chr17,chr17,chr17,chr17	-,-,+,-	SKA2,MIR301A,PRR11,SKA2	996,-2881,1005,996
chr19:51892650-51892923	chr19	+	51892725	51892965	True	NM_001161748,NM_001193623,NR_033235,NM_030657	chr19,chr19,chr19,chr19	-,-,+,-	LIM2,LOC147646,LOC100129083,LIM2	-1515,913,26194,-1515
chr20:33134060-33135023	chr20	+	33134588	33135024	True	NM_080476,NM_181509	chr20,chr20	-,+	PIGU,MAP1LC3A	130115,31
chr16:3562040-3562839	chr16	+	3562419	3562639	True	NM_024793,NM_001080524	chr16,chr16	+,-	CLUAP1,C16orf90	-2576,-16998
chr16:71794066-71795642	chr16	+	71794067	71795572	True	NR_003059,NM_001137675	chr16,chr16	-,+	SNORD71,ATXN1L	-1677,84326
chr5:68631204-68632328	chr5	+	68631272	68632126	True	NM_176816,NM_133343	chr5,chr5	-,+	CCDC125,RAD17	-14862,32997
chr1:24471682-24472456	chr1	+	24471871	24472403	True	NM_021258,NR_027087	chr1,chr1	-,+	IL22RA1,LOC284632	-2096,54326
chr17:6878070-6878372	chr17	+	6878191	6878377	True	NM_000697,NR_029712	chr17,chr17	+,-	ALOX12,MIR195	21006,42693
chr11:65713767-65714280	chr11	+	65713773	65714257	True	NM_031450,NM_152762	chr11,chr11	-,+	C11orf68,TSGA10IP	-27242,-709
chr2:740894-742156	chr2	+	741032	742183	True	NM_018968,NM_152834	chr2,chr2	+,-	SNTG2,TMEM18	204370,-63593
chr11:71898742-71899964	chr11	+	71899439	71899915	True	NM_016725,NM_016724,NM_005169,NM_016729,NM_000802	chr11,chr11,chr11,chr11,chr11	+,+,-,+,+	FOLR1,FOLR1,PHOX2A,FOLR1,FOLR1	686,686,55355,3257,1043
chr1:109965253-109966957	chr1	+	109965611	109966854	True	NM_001199774,NM_002790,NM_001040709,NM_001199772,NM_001199773	chr1,chr1,chr1,chr1,chr1	-,-,+,-,-	PSMA5,PSMA5,SYPL2,PSMA5,PSMA5	2319,2281,42245,2281,2292
chr11:61596994-61598135	chr11	+	61597021	61598065	True	NM_013402,NM_004265	chr11,chr11	-,+	FADS1,FADS2	-12492,-1359
chr4:2858932-2859189	chr4	+	2858946	2859064	True	NM_176801,NM_001120	chr4,chr4	+,-	ADD1,MFSD10	-13420,76950
chr4:668055-668427	chr4	+	668054	668314	True	NM_002477,NM_007100,NR_033743	chr4,chr4,chr4	+,-,-	MYL5,ATP5I,ATP5I	3396,13,13
chr19:52954827-52955182	chr19	+	52954859	52955215	True	NM_001099694,NM_001105549	chr19,chr19	+,-	ZNF578,ZNF83	1613,186484
chr8:21997173-21997385	chr8	+	21997181	21997355	True	NM_005144,NM_001172357,NM_018411,NM_025232	chr8,chr8,chr8,chr8	-,+,-,-	HR,SFTPC,HR,REEP4	-8616,21828,-8616,2143
chr2:234758407-234759539	chr2	+	234758638	234759512	True	NM_018410,NM_024080	chr2,chr2	-,+	HJURP,TRPM8	3750,66530
chr14:34933610-34934681	chr14	+	34933694	34934703	True	NR_002937,NM_138288	chr14,chr14	+,-	C14orf19,C14orf147	474424,-2226
chr19:49342088-49342326	chr19	+	49342113	49342375	True	NM_014330,NM_016246	chr19,chr19	+,-	PPP1R15A,HSD17B14	33273,-2179
chr19:38717237-38717877	chr19	+	38717250	38717572	True	NM_001135156,NM_004647,NM_001135155,NM_001166103	chr19,chr19,chr19,chr19	-,-,-,+	DPF1,DPF1,DPF1,SPINT2	2795,-2360,-2360,37525
chr7:128280775-128282549	chr7	+	128281221	128282329	True	NR_024368,NM_001708	chr7,chr7	+,-	FLJ45340,OPN1SW	1,133565
chr19:49540854-49541527	chr19	+	49540994	49541469	True	NR_004383,NM_033378,NM_033377,NR_024244,NM_033043	chr19,chr19,chr19,chr19,chr19	+,+,-,-,+	SNAR-G1,CGB2,CGB1,SNAR-G2,CGB5	-769,-5916,-803,-5950,5632
chr19:49540854-49541527	chr19	+	49528050	49528443	False	NM_000894,NM_000737,NM_033378,NR_024244	chr19,chr19,chr19,chr19	-,-,+,-	LHB,CGB,CGB2,SNAR-G2	-7703,-457,6686,6654
chr19:49540854-49541527	chr19	-	49533863	49534256	False	NR_004383,NR_024244,NM_033378,NM_033377,NM_000737	chr19,chr19,chr19,chr19,chr19	+,-,+,-,-	SNAR-G1,SNAR-G2,CGB2,CGB1,CGB	6020,838,873,5985,-6270
chr14:20811825-20812693	chr14	+	20812022	20812669	True	NM_001042618,NM_005484,NR_002312	chr14,chr14,chr14	+,+,-	PARP2,PARP2,RPPH1	-308,-308,-452
chr6:28364804-28366201	chr6	+	28364816	28366228	True	NM_024493,NM_001163391,NR_028077	chr6,chr6,chr6	+,-,-	ZKSCAN3,ZSCAN12,ZSCAN12	-47176,1366,1366
chr11:67205289-67205771	chr11	+	67205307	67205673	True	NM_020441,NM_001018070,NM_003952,NM_005608	chr11,chr11,chr11,chr11	-,-,+,-	CORO1B,CORO1B,RPS6KB2,PTPRCAP	5360,5640,-9423,-154
chr14:94641549-94641779	chr14	+	94641579	94641827	True	NM_032036,NM_058237,NM_020958	chr14,chr14,chr14	-,+,+	IFI27L2,PPP4R4,PPP4R4	-45622,-981,-981
chr8:21769041-21769250	chr8	+	21769171	21769267	True	NM_003974,NM_015024	chr8,chr8	-,+	DOK2,XPO7	1988,7912
chr18:46475861-46476145	chr18	+	46475861	46476076	True	NM_001190823,NM_001190822,NM_001190821,NM_005904,NM_014772	chr18,chr18,chr18,chr18,chr18	-,-,-,-,+	SMAD7,SMAD7,SMAD7,SMAD7,CTIF	-6684,-158,1055,1055,-410485
chr7:149193522-149193732	chr7	+	149193524	149193770	True	NR_036573,NM_001163474,NM_152557	chr7,chr7,chr7	+,-,-	LOC155060,ZNF746,ZNF746	-211203,1178,1178
chr7:149193522-149193732	chr7	+	149320466	149320744	False	NM_032534,NR_027788,NR_027789	chr7,chr7,chr7	+,-,-	KRBA1,ZNF767,ZNF767	91403,1187,1187
chr9:135457720-135458032	chr9	+	135457755	135458021	True	NM_022779,NM_020064	chr9,chr9	-,+	DDX31,BARHL1	87817,-15
chr4:140202153-140203349	chr4	+	140202318	140203395	True	NM_057175,NM_032623	chr4,chr4	+,-	NAA15,C4orf49	19280,-826
chr19:55851215-55851429	chr19	+	55851215	55851275	True	NM_001085488,NM_032701	chr19,chr19	-,+	TMEM150B,SUV420H2	-14507,-45
chr8:134420207-134422065	chr8	+	134420648	134421980	True	NR_037944,NM_006096	chr8,chr8	+,-	WISP1,NDRG1	-217417,-111101
chr20:30193041-30193251	chr20	+	30193061	30193198	True	NM_181353,NR_036161,NM_001191,NM_002165	chr20,chr20,chr20,chr20	+,+,-,+	ID1,MIR3193,BCL2L1,ID1	-20,1790,117509,-20
chr14:93805938-93807516	chr14	+	93806046	93807410	True	NM_020818,NM_182971,NM_018167,NM_001002860	chr14,chr14,chr14,chr14	+,+,-,-	KIAA1409,COX8C,BTBD7,BTBD7	-6532,6126,-6661,-6661
chr10:88732213-88732937	chr10	+	88732341	88732899	True	NM_024756,NM_133447,NM_006829	chr10,chr10,chr10	-,+,+	MMRN2,AGAP11,C10orf116	-14916,-1894,-4204
chr11:60738834-60739275	chr11	+	60738833	60739195	True	NR_027391,NM_006725	chr11,chr11	-,+	SLC15A3,CD6	-19576,-81
chr2:183892384-183893767	chr2	+	183892549	183893570	True	NM_013436,NM_001142314,NM_205842	chr2,chr2,chr2	-,+,-	NCKAP1,DUSP19,NCKAP1	9717,49716,9717
chr5:7852467-7854302	chr5	+	7852540	7854305	True	NM_001089584,NM_002454	chr5,chr5	-,+	C5orf49,MTRR	-1276,14911
chr16:30581765-30582313	chr16	+	30581787	30582227	True	NM_001024683,NM_145271,NM_024031	chr16,chr16,chr16	-,-,+	ZNF688,ZNF688,PRR14	1551,1551,80013
chr6:12718409-12719182	chr6	+	12718458	12719234	True	NM_001143964,NM_030948	chr6,chr6	-,+	TBC1D7,PHACTR1	609610,-676
chr1:181002175-181003126	chr1	+	181002174	181003144	True	NM_005819,NM_001531,NM_001195000,NM_001195035,NM_001194999	chr1,chr1,chr1,chr1,chr1	-,+,+,+,+	STX6,MR1,MR1,MR1,MR1	-10128,38,38,38,38
chr7:108163854-108165117	chr7	+	108163893	108164997	True	NM_015723,NM_012328	chr7,chr7	-,+	PNPLA8,DNAJB9	1698,45191
chr17:3703709-3704572	chr17	+	3703782	3704616	True	NM_031965,NM_002208	chr17,chr17	+,-	GSG2,ITGAE	-76636,-29
chr22:29838653-29840049	chr22	+	29838809	29840086	True	NR_002727,NM_021026	chr22,chr22	-,+	RFPL1S,RFPL1	-691,-4303
chr10:98503250-98504132	chr10	+	98503550	98504113	True	NM_152309,NM_001170765	chr10,chr10	-,+	PIK3AP1,LCOR	-23271,87903
chr10:72971809-72972116	chr10	+	72971810	72972154	True	NM_000281,NM_170744	chr10,chr10	-,+	PCBD1,UNC5B	-323269,143
chr5:60619686-60620493	chr5	+	60619724	60620199	True	NM_001048249,NM_020928	chr5,chr5	-,+	C5orf43,ZSWIM6	-161422,7900
chr17:4167430-4168220	chr17	+	4167477	4168203	True	NM_016376,NM_020740,NR_023347	chr17,chr17,chr17	-,-,+	ANKFY1,ANKFY1,CYB5D2	-203,-203,-121066
chr18:14969740-14970206	chr18	+	14970034	14970254	True	NR_027417,NR_036153	chr18,chr18	-,+	LOC644669,MIR3156-2	355714,-139920
chr3:15562530-15562829	chr3	+	15562548	15562842	True	NM_005677,NM_000060,NM_080539	chr3,chr3,chr3	-,+,-	COLQ,BTD,COLQ	466,80412,466
chr8:107281626-107282116	chr8	+	107281647	107282117	True	NM_018002,NM_139166,NM_001198533	chr8,chr8,chr8	+,-,+	OXR1,ABRA,OXR1	288,500405,288
chr17:39994672-39995099	chr17	+	39994797	39994879	True	NM_052935,NR_033464,NR_033465,NM_152467	chr17,chr17,chr17,chr17	-,-,-,+	NT5C3L,NT5C3L,NT5C3L,KLHL10	-2274,-2309,-2274,-805
chr6:33386133-33387247	chr6	+	33386409	33387271	True	NM_002636,NM_001014838,NM_006772,NM_001014433,NM_001014837,NM_001014840,NM_024165,NR_027692,NM_015921	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	+,-,+,-,-,-,+,+,-	PHF1,CUTA,SYNGAP1,CUTA,CUTA,CUTA,PHF1,PHF1,CUTA	-7687,-344,575,-344,-344,-344,-7687,-7687,-344
chr6:33386133-33387247	chr6_ssto_hap7	+	4866655	4867517	False	NM_002636,NM_001014838,NM_006772,NM_001014433,NM_001014837,NM_001014840,NM_024165,NR_027692	chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7	+,-,+,-,-,-,+,+	PHF1,CUTA,SYNGAP1,CUTA,CUTA,CUTA,PHF1,PHF1	-7685,-344,575,-344,-344,-344,-7685,-7685
chr13:114143694-114143946	chr13	+	114143713	114143853	True	NM_017905,NM_001014283	chr13,chr13	+,-	TMCO3,DCUN1D2	1454,1220
chr3:176039697-176041301	chr3	+	176040103	176040871	True	NM_207015,NM_024665	chr3,chr3	+,-	NAALADL2,TBL1XR1	-1463044,874227
chr1:32111166-32112891	chr1	+	32111247	32112844	True	NR_033688,NR_033686,NM_001525,NM_012392	chr1,chr1,chr1,chr1	-,-,+,-	PEF1,PEF1,HCRTR1,PEF1	-1029,-409,-27997,-409
chr14:81419851-81420333	chr14	+	81419975	81420159	True	NM_001018036,NM_001142626,NM_152446,NM_000369	chr14,chr14,chr14,chr14	+,+,-,+	TSHR,TSHR,C14orf145,TSHR	1709,1709,-14091,1709
chr12:49415846-49416074	chr12	+	49415862	49416124	True	NM_002733,NM_212461,NM_005430	chr12,chr12,chr12	-,-,+	PRKAG1,PRKAG1,WNT1	-3270,-3270,-43677
chr2:151344214-151344982	chr2	+	151344317	151345006	True	NM_007115,NM_005168	chr2,chr2	+,-	TNFAIP6,RND3	869099,-137
chr19:50462693-50463257	chr19	+	50462824	50463200	True	NM_001135163,NM_052884,NR_002825	chr19,chr19,chr19	-,-,+	SIGLEC11,SIGLEC11,SIGLEC16	1279,1279,9711
chr19:50462693-50463257	chr19	-	50474057	50474433	False	NM_001135163,NM_052884,NR_002825	chr19,chr19,chr19	-,-,+	SIGLEC11,SIGLEC11,SIGLEC16	-9628,-9628,-1196
chr17:76974461-76974749	chr17	+	76974475	76974553	True	NM_005567,NM_030968	chr17,chr17	-,+	LGALS3BP,C1QTNF1	1558,45697
chr20:34233966-34234952	chr20	+	34234231	34234931	True	NM_003915,NM_003116	chr20,chr20	-,+	CPNE1,SPAG4	6959,-30473
chr4:154229097-154229328	chr4	+	154229115	154229363	True	NM_032117,NR_001562	chr4,chr4	+,-	MND1,ANXA2P1	36437,650
chr5:53605668-53605913	chr5	+	53605682	53605882	True	NM_006308,NM_019087	chr5,chr5	+,-	HSPB3,ARL15	145548,571
chr1:160053397-160053848	chr1	+	160053468	160053608	True	NM_002241,NM_004983	chr1,chr1	-,+	KCNJ10,KCNJ9	-13417,-2159
chr5:783607-784034	chr5	+	783654	784080	True	NM_001166260,NM_024786	chr5,chr5	+,-	TRIP13,ZDHHC11	108888,67071
chr5:783607-784034	chr5	+	691605	692699	False	NM_018140,NM_007030	chr5,chr5	+,-	CEP72,TPPP	-79251,861
chr19:18337574-18338577	chr19	+	18337786	18338478	True	NM_001098819,NM_001098818,NM_032683	chr19,chr19,chr19	-,-,+	PDE4C,PDE4C,MPV17L2	-2483,-538,-33797
chr3:58223888-58224168	chr3	+	58223894	58224088	True	NM_020676,NM_004944	chr3,chr3	+,-	ABHD6,DNASE1L3	-686,-23496
chr16:11348069-11348609	chr16	+	11348068	11348477	True	NM_003745,NM_152308	chr16,chr16	-,+	SOCS1,C16orf75	1612,90833
chrY:23568292-23568690	chrY	+	23568307	23568501	True	NR_001574,NM_001006121	chrY,chrY	-,+	RBMY2EP,RBMY1B	-4859,104722
chr3:93807756-93808525	chr3	+	93807824	93808569	True	NM_001195643,NM_022072	chr3,chr3	-,+	DHFRL1,NSUN3	-25757,-26028
chr7:132316917-132317302	chr7	+	132317019	132317336	True	NM_001037126,NM_181775	chr7,chr7	+,-	EXOC4,PLXNA4	620486,16162
chr16:87418307-87418784	chr16	+	87418324	87418748	True	NM_022818,NM_024735,NR_024568	chr16,chr16,chr16	+,-,-	MAP1LC3B,FBXO31,FBXO31	7052,-930,7010
chr2:102804902-102806405	chr2	+	102805188	102806452	True	NM_003854,NM_032718	chr2,chr2	+,-	IL1RL2,MFSD9	-1813,546935
chr8:30515754-30515985	chr8	+	30515809	30516011	True	NM_002095,NM_005671	chr8,chr8	-,+	GTF2E2,UBXN8	-71,85678
chr16:68771519-68771818	chr16	+	68771755	68771817	True	NM_004360,NM_018667	chr16,chr16	+,-	CDH1,SMPD3	-611,-289346
chr6:14769377-14770787	chr6	+	14769593	14770815	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	475711,892524
chr2:187453494-187454019	chr2	+	187453530	187454000	True	NM_002210,NM_001145000,NM_182521	chr2,chr2,chr2	+,+,-	ITGAV,ITGAV,ZSWIM2	789,789,259947
chr1:207829505-207831398	chr1	+	207829783	207831404	True	NM_175710,NR_029832	chr1,chr1	+,-	CR1L,MIR29C	-11383,143938
chr1:145063959-145064296	chr1	+	145064081	145064178	True	NM_004892,NM_022359	chr1,chr1	+,-	SEC22B,PDE4DIP	32228,12061
chr12:120907673-120907881	chr12	+	120907694	120907826	True	NM_001037494,NM_003769	chr12,chr12	+,-	DYNLL1,SRSF9	-85,-136
chr12:123449603-123449888	chr12	+	123449649	123449937	True	NM_203444,NM_019625,NM_019624,NM_024623	chr12,chr12,chr12,chr12	-,-,-,+	ABCB9,ABCB9,ABCB9,OGFOD2	9865,1169,1169,9416
chr1:41160833-41161183	chr1	+	41160992	41161094	True	NR_024567,NM_014223,NM_001142589,NM_001142588,NM_001142587,NM_001142590	chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,+,+,+	LOC100130557,NFYC,NFYC,NFYC,NFYC,NFYC	-3059,-3810,-3810,-3810,-3810,-3372
chr22:45147012-45147709	chr22	+	45147351	45147505	True	NM_181335,NM_001198726,NM_001017526,NM_032287	chr22,chr22,chr22,chr22	+,+,+,-	ARHGAP8,ARHGAP8,ARHGAP8,LDOC1L	932,932,932,-253346
chr13:31038805-31039018	chr13	+	31038804	31038908	True	NM_005800,NM_002128	chr13,chr13	+,-	USPL1,HMGB1	152921,1223
chr5:178419847-178420195	chr5	+	178419925	178420223	True	NM_001136116,NM_000843	chr5,chr5	+,-	ZNF879,GRM6	30552,1951
chr16:29910637-29911295	chr16	+	29910642	29911300	True	NM_012410,NM_001114099,NM_001114100,NM_181718,NM_201575	chr16,chr16,chr16,chr16,chr16	-,-,-,+,-	SEZ6L2,SEZ6L2,SEZ6L2,ASPHD1,SEZ6L2	-62,-62,-62,846,-62
chr10:1570780-1572595	chr10	+	1570833	1572243	True	NR_033387,NM_018702	chr10,chr10	+,-	NCRNA00168,ADARB2	-2059,207525
chr16:2003514-2003715	chr16	+	2003571	2003675	True	NR_002326,NR_002327,NM_004548,NM_005061	chr16,chr16,chr16,chr16	-,-,+,-	SNORA64,SNORA10,NDUFB10,RPL3L	9482,8842,5841,1054
chr4:102758401-102759272	chr4	+	102758437	102759044	True	NM_001083907,NM_001135148	chr4,chr4	+,-	BANK1,SLC39A8	-23510,486483
chr6:118973055-118973295	chr6	+	118973092	118973321	True	NM_001042475,NM_206921,NM_002667	chr6,chr6,chr6	-,-,+	C6orf204,C6orf204,PLN	-72,-72,-103701
chr6:105847253-105847868	chr6	+	105847398	105847906	True	NR_037157,NM_002726	chr6,chr6	+,-	C6orf112,PREP	-261888,3143
chr2:85765066-85765642	chr2	+	85765186	85765641	True	NM_005911,NM_000821	chr2,chr2	+,-	MAT2A,GGCX	646,23066
chr1:35257073-35258458	chr1	+	35257270	35258390	True	NM_001164824,NM_001005752,NM_002060	chr1,chr1,chr1	-,+,+	C1orf212,GJB3,GJA4	66306,-9422,208
chr1:204454948-204455445	chr1	+	204455089	204455256	True	NM_001204171,NM_002646	chr1,chr1	+,-	MDM4,PIK3C2B	30250,4277
chr11:61248799-61249525	chr11	+	61248861	61249403	True	NM_001136040,NM_145017,NM_001170753	chr11,chr11,chr11	-,+,+	CPSF7,C11orf66,C11orf66	-51397,-327,-327
chr17:67029370-67029865	chr17	+	67029536	67029884	True	NM_080283,NM_002758	chr17,chr17	-,+	ABCA9,MAP2K6	27306,380953
chr16:19569295-19569962	chr16	+	19569404	19569963	True	NM_020314,NM_016641	chr16,chr16	+,-	C16orf62,GDE1	-2725,-35954
chr12:129306618-129307187	chr12	+	129306680	129307088	True	NM_145648,NM_144669	chr12,chr12	-,+	SLC15A4,GLT1D1	1507,30992
chr12:51715342-51715729	chr12	+	51715480	51715772	True	NM_001136269,NM_016293	chr12,chr12	+,-	DAZAP2,BIN2	-83036,2216
chr18:21975468-21975744	chr18	+	21975468	21975680	True	NM_080597,NM_018439	chr18,chr18	-,+	OSBPL1A,IMPACT	2160,30928
chr10:20106102-20106302	chr10	+	20106101	20106275	True	NM_006393,NM_032812	chr10,chr10	-,+	NEBL,PLXDC2	1080306,-781
chr9:4643098-4643724	chr9	+	4643279	4643606	True	NM_203453,NM_001039395	chr9,chr9	+,-	PPAPDC2,C9orf68	18691,23125
chr18:13138719-13139241	chr18	+	13138781	13139075	True	NM_002828,NM_181481	chr18,chr18	-,+	PTPN2,C18orf1	-254447,79710
chr8:57233196-57233598	chr8	+	57233254	57233511	True	NM_138969,NM_024300	chr8,chr8	-,+	SDR16C5,CHCHD7	-13,-108991
chr11:3664669-3665135	chr11	+	3664811	3665033	True	NM_001079536,NM_053017,NM_004314	chr11,chr11,chr11	-,-,+	ART5,ART5,ART1	-1265,-1326,1327
chr19:44644595-44645672	chr19	+	44644945	44645661	True	NM_001144824,NM_006630,NR_033341	chr19,chr19,chr19	+,+,-	ZNF234,ZNF234,LOC100379224	48,48,-27609
chr9:72873483-72873827	chr9	+	72873581	72873726	True	NM_001206,NM_015110	chr9,chr9	-,+	KLF9,SMC5	155897,151
chr12:56849574-56850344	chr12	+	56849587	56850129	True	NM_003920,NM_012064,NM_207344	chr12,chr12,chr12	-,-,+	TIMELESS,MIP,SPRYD4	-6387,-1152,12171
chr3:38835446-38836872	chr3	+	38835526	38836789	True	NM_020839,NM_006514	chr3,chr3	+,-	WDR48,SCN10A	256717,-25
chr19:19972726-19973493	chr19	+	19972933	19973519	True	NM_021047,NM_001145404	chr19,chr19	+,-	ZNF253,ZNF506	3194,-40373
chr1:187338376-187339663	chr1	+	187338438	187339342	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-688879,-540457
chr17:25322434-25323904	chr17	+	25322499	25323416	True	NM_015626,NM_000625	chr17,chr17	+,-	WSB1,NOS2	297689,804190
chr16:779603-779875	chr16	+	779684	779774	True	NM_001031737,NM_023933,NM_032304	chr16,chr16,chr16	-,+,+	CCDC78,FAM173A,HAGHL	-3211,-8577,-2469
chr20:62679273-62679500	chr20	+	62679399	62679465	True	NM_198723,NM_018419	chr20,chr20	+,-	TCEA2,SOX18	8973,1564
chr6:150066458-150067270	chr6	+	150066613	150067305	True	NM_198887,NM_005389	chr6,chr6	-,+	NUP43,PCMT1	433,3525
chr4:186718939-186720545	chr4	+	186718989	186720567	True	NM_001145672,NM_003265	chr4,chr4	-,+	SORBS2,TLR3	11531,269741
chr10:26927221-26927608	chr10	+	26927323	26927536	True	NR_026794,NM_001012750	chr10,chr10	+,-	LOC731789,ABI1	4500,222530
chr10:120842066-120842730	chr10	+	120842387	120842638	True	NM_207009,NM_003750	chr10,chr10	+,-	FAM45A,EIF3A	20972,-2053
chr19:14995498-14997492	chr19	+	14995503	14997277	True	NM_030901,NM_012377	chr19,chr19	-,+	OR7A17,OR7C2	-3336,55023
chr3:182511853-182512176	chr3	+	182512035	182512225	True	NM_014616,NM_020640	chr3,chr3	+,-	ATP11B,DCUN1D1	-795,186151
chr13:46627062-46627828	chr13	+	46627147	46627876	True	NM_015070,NM_152719	chr13,chr13	-,+	ZC3H13,SPERT	-253,-350753
chr12:122295651-122296249	chr12	+	122295656	122296055	True	NM_002813,NM_002150	chr12,chr12	+,-	PSMD9,HPD	30590,771
chr1:120254892-120255705	chr1	+	120254985	120255694	True	NM_006623,NM_001166107	chr1,chr1	+,-	PHGDH,HMGCS2	-617,55912
chr6:46097466-46097669	chr6	+	46097481	46097663	True	NM_021572,NM_014936	chr6,chr6	-,+	ENPP5,ENPP4	41104,37
chr6:3256784-3257679	chr6	+	3256883	3257646	True	NM_178012,NM_001135750,NM_001128591,NM_001128592	chr6,chr6,chr6,chr6	-,+,+,+	TUBB2B,PSMG4,PSMG4,PSMG4	-28915,1515,1515,1515
chr14:77271444-77272941	chr14	+	77271700	77272732	True	NM_015305,NM_194287	chr14,chr14	-,+	ANGEL1,C14orf166B	6601,19992
chr2:61103600-61104182	chr2	+	61103947	61104047	True	NM_002908,NR_033980	chr2,chr2	+,-	REL,FLJ16341	4704,4458
chr8:144415749-144416370	chr8	+	144415782	144416340	True	NM_052963,NM_052924	chr8,chr8	-,+	TOP1MT,RHPN1	760,34684
chr3:50377169-50378161	chr3	+	50377231	50377849	True	NM_015896,NM_007022,NM_170712,NM_170713,NM_007182,NM_170714	chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-	ZMYND10,CYB561D2,RASSF1,RASSF1,RASSF1,RASSF1	5357,10447,-1567,-2336,568,568
chr1:10488659-10489205	chr1	+	10488868	10489126	True	NM_198544,NM_004401,NR_036462,NM_199294,NM_199006,NR_037187,NR_037186	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,-,+,+,+,+,+	APITD1-CORT,DFFA,APITD1,APITD1,APITD1-CORT,APITD1-CORT,APITD1-CORT	1032,43537,1677,1032,1032,1677,1677
chr1:143736998-143738625	chr1	+	143737340	143738625	True	NR_033189,NR_027469,NR_027468	chr1,chr1,chr1	+,-,-	LOC100130000,LOC100286793,FLJ39739	-50268,6013,5883
chr1:143736998-143738625	chr1	+	144334897	144334948	False	NR_024584,NM_001037675,NR_024510,NR_024511	chr1,chr1,chr1,chr1	-,+,-,-	LOC728875,NBPF9,LOC728855,LOC728855	6858,280010,5876,5876
chr1:143736998-143738625	chr1	+	144515146	144515197	False	NR_024584,NM_001037675	chr1,chr1	-,+	LOC728875,NBPF9	6823,99761
chr1:143736998-143738625	chr1	-	149582278	149582329	False	NM_001024599,NR_024510	chr1,chr1	-,+	HIST2H2BF,LOC728855	-183049,-5877
chr1:143736998-143738625	chr1	+	147924862	147926147	False	NM_001097616,NR_027468	chr1,chr1	+,-	GPR89C,FLJ39739	-499353,5884
chr1:160255153-160255421	chr1	+	160255154	160255278	True	NR_036492,NR_002190,NM_002857,NM_001193644,NR_036493	chr1,chr1,chr1,chr1,chr1	-,+,-,-,-	PEX19,SUMO1P3,PEX19,PEX19,PEX19	-213,31776,-213,-213,-213
chr1:26631731-26632848	chr1	+	26631918	26632784	True	NM_001803,NM_183008,NM_001077262	chr1,chr1,chr1	+,-,-	CD52,UBXN11,UBXN11	11626,461,461
chr3:179062617-179063329	chr3	+	179062617	179063239	True	NM_033540,NM_171828	chr3,chr3	+,-	MFN1,KCNMB3	2240,-77779
chr12:6307507-6307791	chr12	+	6307570	6307756	True	NM_001769,NM_000552	chr12,chr12	+,-	CD9,VWF	1725,-73734
chr14:32545747-32546058	chr14	+	32545746	32545882	True	NR_027263,NM_001173,NM_001030055	chr14,chr14,chr14	-,+,+	C14orf128,ARHGAP5,ARHGAP5	73,612,612
chr3:112283044-112284394	chr3	+	112283138	112284223	True	NM_022488,NM_017945	chr3,chr3	-,+	ATG3,SLC35A5	-2653,-2294
chr18:3011048-3011510	chr18	+	3011122	3011403	True	NM_014646,NM_032048	chr18,chr18	-,+	LPIN2,EMILIN2	593,-164153
chr3:190231968-190232179	chr3	+	190232038	190232206	True	NM_001167928,NM_001167929,NM_001167931,NM_001167930,NM_134470,NM_207316,NM_002182	chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,+,-,+	IL1RAP,IL1RAP,IL1RAP,IL1RAP,IL1RAP,TMEM207,IL1RAP	-249,-249,-249,-249,-249,-64373,-249
chr10:116696076-116696669	chr10	+	116696176	116696698	True	NM_139169,NM_001003408	chr10,chr10	+,-	TRUB1,ABLIM1	1253,-251762
chr20:58509290-58510717	chr20	+	58509334	58510438	True	NM_022106,NM_001190827,NM_006242,NM_001190826,NM_014258	chr20,chr20,chr20,chr20,chr20	+,+,-,+,-	C20orf177,C20orf177,PPP1R3D,C20orf177,SYCP2	5005,5005,4972,-566,-2125
chr13:52483542-52484868	chr13	+	52483888	52484880	True	NR_027048,NM_031290	chr13,chr13	-,+	NCRNA00282,CCDC70	-64602,-47822
chr17:80187749-80187969	chr17	+	80187814	80187906	True	NM_001042423,NM_001042422,NM_004207,NM_198082	chr17,chr17,chr17,chr17	+,+,+,-	SLC16A3,SLC16A3,SLC16A3,CCDC57	2237,-1572,-976,-17125
chr10:93682816-93683509	chr10	+	93683075	93683509	True	NM_152429,NM_003972	chr10,chr10	-,+	FGFBP3,BTAF1	-13817,226
chr4:38808083-38808728	chr4	+	38808322	38808402	True	NM_003263,NM_138389	chr4,chr4	-,+	TLR1,FAM114A1	-1910,60951
chr7:12441783-12442870	chr7	+	12441784	12442918	True	NM_001112706,NM_001135924	chr7,chr7	+,-	SCIN,VWDE	167284,984
chr1:89847873-89848970	chr1	+	89847931	89849004	True	NM_052942,NM_198460	chr1,chr1	-,+	GBP5,GBP6	-109387,-18559
chr15:75919565-75921126	chr15	+	75919708	75920772	True	NM_001042588,NM_001042581,NM_153271,NM_005701	chr15,chr15,chr15,chr15	-,-,+,-	SNUPN,SNUPN,SNX33,SNUPN	-989,-1262,20575,-1262
chr9:127115310-127115978	chr9	+	127115377	127116003	True	NM_002799,NR_027406	chr9,chr9	-,+	PSMB7,LOC100129034	61768,-72
chr19:13047129-13047654	chr19	+	13047184	13047608	True	NM_004461,NM_005053,NM_004343	chr19,chr19,chr19	-,+,+	FARSA,RAD23A,CALR	-2626,9045,1805
chr7:152373410-152374182	chr7	+	152373554	152374218	True	NM_005431,NM_001040135	chr7,chr7	-,+	XRCC2,ACTR3B	-304,82632
chr20:30601403-30602746	chr20	+	30601584	30602695	True	NM_030815,NM_080625	chr20,chr20	-,+	PDRG1,C20orf160	-61701,-3390
chr17:72361808-72362338	chr17	+	72362015	72362107	True	NM_181790,NM_001080466	chr17,chr17	+,-	GPR142,BTBD17	1537,-4057
chr7:56160330-56160580	chr7	+	56160346	56160576	True	NM_015411,NM_006213	chr7,chr7	+,-	SUMF2,PHKG1	-28480,163
chr10:7830445-7831026	chr10	+	7830497	7831013	True	NM_005174,NM_012311,NM_001001973	chr10,chr10,chr10	+,-,+	ATP5C1,KIN,ATP5C1	-455,-553,-455
chr1:109420745-109421869	chr1	+	109420748	109421915	True	NM_013296,NM_152763	chr1,chr1	+,-	GPSM2,AKNAD1	-1203,-21032
chr7:43157645-43158406	chr7	+	43157669	43158444	True	NM_015052,NM_002787	chr7,chr7	+,-	HECW1,PSMA2	-5522,-185864
chr4:2265376-2266523	chr4	+	2265444	2266496	True	NM_001193282,NM_006454	chr4,chr4	+,-	LOC402160,MXD4	154204,-1705
chr11:45792986-45793247	chr11	+	45793148	45793288	True	NR_027134,NM_003654	chr11,chr11	+,-	DKFZp779M0652,CHST1	-216,-105976
chr1:228289931-228290201	chr1	+	228290029	228290119	True	NM_181456,NM_181454,NM_181455,NM_181441,NM_181463,NM_181465,NM_181464,NM_024319,NR_037415,NM_181462	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,-,-,-,+,-	MRPL55,MRPL55,MRPL55,MRPL55,MRPL55,MRPL55,MRPL55,C1orf35,MIR3620,MRPL55	6944,6944,6944,6944,6944,6944,6944,953,-5116,6944
chr17:42992707-42992922	chr17	+	42992800	42992930	True	NM_001131019,NM_213607,NM_002055	chr17,chr17,chr17	-,+,-	GFAP,CCDC103,GFAP	34,-15697,34
chr11:47197533-47197936	chr11	+	47197607	47197805	True	NM_032389,NM_001184975,NM_000107	chr11,chr11,chr11	-,-,+	ARFGAP2,PACSIN3,DDB2	664,9677,38687
chr1:109966957-109967252	chr1	+	109967081	109967141	True	NM_001199774,NM_002790,NM_001040709,NM_001199772,NM_001199773	chr1,chr1,chr1,chr1,chr1	-,-,+,-,-	PSMA5,PSMA5,SYPL2,PSMA5,PSMA5	2017,1979,41958,1979,1990
chr13:46960768-46960996	chr13	+	46960786	46961042	True	NM_001164211,NM_025113	chr13,chr13	+,-	LRCH1,C13orf18	166253,643
chr17:292285-292814	chr17	+	292448	292696	True	NM_182705,NM_001013672	chr17,chr17	-,+	FAM101B,C17orf97	3085,-32381
chr19:4867843-4868311	chr19	+	4868017	4868085	True	NM_005817,NM_001048201,NM_001164189,NM_001164194	chr19,chr19,chr19,chr19	-,+,-,-	PLIN3,UHRF1,PLIN3,PLIN3	-237,41424,-237,-237
chr15:75746880-75747088	chr15	+	75746914	75746982	True	NM_001145357,NM_015477,NM_024608,NM_001145358	chr15,chr15,chr15,chr15	-,-,+,-	SIN3A,SIN3A,NEIL1,SIN3A	1192,-2988,-107634,-2827
chr9:42367560-42367986	chr9	+	42367818	42367894	True	NR_003670,NM_001012419,NM_001012421	chr9,chr9,chr9	-,+,+	KGFLP2,ANKRD20A3,ANKRD20A2	-348234,408,408
chr9:79792307-79792519	chr9	+	79792407	79792487	True	NM_001018037,NM_015186,NM_033305,NR_026668,NM_001018038	chr9,chr9,chr9,chr9,chr9	+,+,+,-,+	VPS13A,VPS13A,VPS13A,LOC100286938,VPS13A	-97,-97,-97,396,-97
chr1:40354083-40354584	chr1	+	40354269	40354626	True	NM_001136493,NM_017646	chr1,chr1	+,-	MFSD2A,TRIT1	66157,-5092
chr12:50715317-50716228	chr12	+	50715560	50716209	True	NM_016357,NM_001170804	chr12,chr12	-,+	LIMA1,LARP4	-38207,78382
chr18:33647531-33648887	chr18	+	33647718	33648696	True	NM_018170,NM_018255	chr18,chr18	-,+	RPRD1A,ELP2	-345,61190
chr1:16401750-16402009	chr1	+	16401854	16402030	True	NM_182623,NM_001165945	chr1,chr1	-,+	FAM131C,CLCNKB	-1727,-26621
chrX:102469347-102469887	chrX	+	102469513	102469931	True	NM_001080425,NM_001127688,NM_001006684	chrX,chrX,chrX	+,+,-	BEX4,BEX4,TCEAL8	88,88,40240
chr3:16648008-16649048	chr3	+	16648056	16648576	True	NM_001144382,NM_001351,NM_001190811	chr3,chr3,chr3	+,-,-	PLCL2,DAZL,DAZL	277875,-1050,-1759
chr8:37797811-37798918	chr8	+	37797879	37798591	True	NM_004095,NM_152413	chr8,chr8	+,-	EIF4EBP1,GOT1L1	89428,-232
chr1:24643537-24644119	chr1	+	24643605	24644143	True	NM_198173,NM_021180,NM_198174,NM_001199013,NM_001195010	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	GRHL3,GRHL3,GRHL3,C1orf201,GRHL3	1668,5386,1668,96169,1912
chr6:35521699-35522166	chr6	+	35521862	35522168	True	NM_003322,NM_007104	chr6,chr6	-,+	TULP1,RPL10A	-41215,-85748
chr19:9081885-9083878	chr19	+	9081894	9083625	True	NM_001004456,NM_024690	chr19,chr19	+,-	OR1M1,MUC16	120295,8443
chr9:86154073-86154368	chr9	+	86154118	86154414	True	NM_174938,NM_001001551	chr9,chr9	-,+	FRMD3,C9orf103	-770,83618
chr16:28962040-28962366	chr16	+	28962076	28962278	True	NM_024816,NM_032815	chr16,chr16	-,+	RABEP2,NFATC2IP	-25544,39
chr11:19263537-19263806	chr11	+	19263600	19263848	True	NM_001111018,NM_024680	chr11,chr11	+,-	NAV2,E2F8	108422,-1093
chr9:130681040-130681624	chr9	+	130681109	130681673	True	NM_175039,NM_001018078,NM_173492,NM_175040	chr9,chr9,chr9,chr9	-,+,-,-	ST6GALNAC4,FPGS,PIP5KL1,ST6GALNAC4	-1804,-115652,8147,-1804
chr12:42632588-42633530	chr12	+	42632604	42633453	True	NM_001190977,NM_005748,NM_001190980,NR_034000,NM_001190979,NM_201438	chr12,chr12,chr12,chr12,chr12,chr12	-,-,-,-,-,+	YAF2,YAF2,YAF2,YAF2,YAF2,PPHLN1	-515,-450,-453,-453,-453,86493
chr1:2987920-2988202	chr1	+	2987932	2988203	True	NM_022114,NR_024371,NR_015440,NM_199454	chr1,chr1,chr1,chr1	+,-,-,+	PRDM16,FLJ42875,FLJ42875,PRDM16	-2241,-3643,-3643,-2241
chr19:3093771-3093972	chr19	+	3093908	3093974	True	NM_002067,NM_198969	chr19,chr19	+,-	GNA11,AES	433,-30944
chr3:50607066-50607430	chr3	+	50607116	50607270	True	NM_016173,NM_001171743,NM_016210,NM_001171741,NM_001171740	chr3,chr3,chr3,chr3,chr3	+,-,-,-,-	HEMK1,C3orf18,C3orf18,C3orf18,C3orf18	-258,-1893,-1893,1238,-1893
chr16:88634309-88634791	chr16	+	88634514	88634688	True	NM_000101,NM_144604	chr16,chr16	-,+	CYBA,ZC3H18	82831,2100
chr10:135340443-135340869	chr10	+	135340581	135340873	True	NM_000773,NM_001143763	chr10,chr10	+,-	CYP2E1,SYCE1	-7,38315
chr17:40705757-40706012	chr17	+	40705814	40705989	True	NM_000413,NM_025233,NM_001042531,NM_001042530,NM_001042532,NM_013290,NM_001042529	chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,-,+	HSD17B1,COASY,COASY,COASY,COASY,PSMC3IP,COASY	-1881,8102,8102,8102,8102,23808,8102
chr17:40705757-40706012	chr17	+	40699626	40699688	False	NM_000413,NM_013290	chr17,chr17	+,-	HSD17B1,PSMC3IP	4295,30109
chr10:30636742-30638034	chr10	+	30636849	30637764	True	NM_018109,NM_005204	chr10,chr10	-,+	MTPAP,MAP3K8	560,85101
chr3:157153785-157155083	chr3	+	157154087	157155121	True	NM_002852,NM_001167917	chr3,chr3	+,-	PTX3,VEPH1	80,58233
chr13:76123017-76123476	chr13	+	76123026	76123404	True	NM_203497,NM_006002	chr13,chr13	-,+	COMMD6,UCHL3	-11035,522
chr14:24026058-24026602	chr14	+	24026115	24026513	True	NR_023314,NM_024328,NM_033400,NM_001126339	chr14,chr14,chr14,chr14	+,+,-,+	THTPA,THTPA,ZFHX2,THTPA	-968,-968,-5257,-968
chr3:169491582-169492717	chr3	+	169491758	169492246	True	NM_001185119,NM_001185118,NM_032487,NR_033703,NR_033702,NR_001566,NM_018657	chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,-,+,+,-,+	MYNN,MYNN,ARPM1,MYNN,MYNN,TERC,MYNN	19,-956,-4075,-956,-956,-8910,-956
chr7:45024220-45025618	chr7	+	45024385	45025518	True	NR_002952,NR_003697,NM_033054,NR_030770	chr7,chr7,chr7,chr7	-,-,-,+	SNORA9,C7orf40,MYO1G,CCM2	196,792,-5681,13826
chr11:35678059-35679409	chr11	+	35678247	35679287	True	NM_015430,NM_017583	chr11,chr11	-,+	PAMR1,TRIM44	-131071,5065
chr21:45959915-45960362	chr21	+	45960193	45960377	True	NR_026548,NM_198691	chr21,chr21	+,-	C21orf90,KRTAP10-1	-23146,-115
chr1:36689698-36690144	chr1	+	36689861	36690175	True	NM_014408,NM_005119	chr1,chr1	-,+	TRAPPC3,THRAP3	-74794,63
chr2:239231250-239231926	chr2	+	239231364	239231710	True	NM_015650,NM_022817,NM_001139490	chr2,chr2,chr2	+,-,+	TRAF3IP1,PER2,TRAF3IP1	-2230,-34157,-2230
chr2:191512664-191512945	chr2	+	191512719	191512984	True	NM_005966,NM_001142645	chr2,chr2	+,-	NAB1,TMEM194B	863,-113251
chr19:49929289-49929558	chr19	+	49929327	49929555	True	NM_001195256,NM_178449	chr19,chr19	+,-	LOC645971,PTH2	132,-2629
chr2:234178659-234179813	chr2	+	234178672	234179850	True	NR_003008,NM_018218	chr2,chr2	+,-	SCARNA5,USP40	4521,294436
chr19:7561038-7561402	chr19	+	7561162	7561411	True	NM_198534,NM_080662	chr19,chr19	+,-	C19orf45,PEX11G	1033,-7257
chr12:93567304-93568940	chr12	+	93567410	93568720	True	NM_019094,NM_003566	chr12,chr12	+,-	NUDT4,EEA1	202980,-244303
chr3:101545799-101546560	chr3	+	101545962	101546469	True	NM_001005474,NM_000986	chr3,chr3	+,-	NFKBIZ,RPL24	364,-140399
chr2:25191504-25192641	chr2	+	25191677	25192294	True	NM_016544,NM_001198559,NR_034113	chr2,chr2,chr2	-,-,+	DNAJC27,DNAJC27,LOC729723	2719,2719,2686
chr12:52949679-52950836	chr12	+	52949823	52950821	True	NM_033448,NM_002284	chr12,chr12	-,+	KRT71,KRT86	-2892,-254225
chr6:170571637-170573042	chr6	+	170571720	170573034	True	NM_032448,NR_002787	chr6,chr6	+,-	FAM120B,LOC154449	42809,-63
chr18:77710687-77710977	chr18	+	77710713	77710841	True	NM_001136180,NM_001146343,NM_001146345,NM_025078	chr18,chr18,chr18,chr18	+,-,-,-	HSBP1L1,PQLC1,PQLC1,PQLC1	13740,862,862,862
chr2:234760290-234762271	chr2	+	234760662	234762168	True	NM_018410,NM_024080	chr2,chr2	-,+	HJURP,TRPM8	1094,63874
chr6:43657160-43658764	chr6	+	43657185	43658561	True	NM_152732,NM_018135,NM_001193343	chr6,chr6,chr6	+,-,-	RSPH9,MRPS18A,MRPS18A	-44469,-1636,-1636
chr5:96303668-96304404	chr5	+	96303667	96304324	True	NM_001198541,NM_175920	chr5,chr5	-,+	ERAP1,LNPEP	-153819,-9565
chr4:2012318-2013141	chr4	+	2012447	2013190	True	NM_005663,NM_001168243	chr4,chr4	-,+	WHSC2,C4orf48	-1488,30529
chr19:23730817-23731805	chr19	+	23730983	23731561	True	NM_138330,NR_003662	chr19,chr19	-,+	ZNF675,RPSAP58	138506,214254
chr20:62178517-62178721	chr20	+	62178516	62178666	True	NM_005975,NM_024059,NM_080823	chr20,chr20,chr20	-,+,-	PTK6,C20orf195,SRMS	-9809,5706,241
chr7:138825443-138825726	chr7	+	138825557	138825702	True	NM_001144923,NM_024926,NM_001144920,NM_024625	chr7,chr7,chr7,chr7	+,+,+,-	TTC26,TTC26,TTC26,ZC3HAV1	-7126,-7126,-7126,-31092
chr5:174907326-174908415	chr5	+	174907446	174908305	True	NM_000794,NM_022754	chr5,chr5	-,+	DRD1,SFXN1	-36283,-1983
chrX:140677913-140678165	chrX	+	140677937	140678009	True	NM_013453,NM_145662	chrX,chrX	+,+	SPANXA1,SPANXA2	-129,-153
chrX:140677913-140678165	chrX	-	140672685	140672757	False	NM_013453,NM_145662	chrX,chrX	-,-	SPANXA1,SPANXA2	129,153
chrX:140677913-140678165	chrX	-	140786447	140786519	False	NM_032417,NM_013453,NM_145665	chrX,chrX,chrX	-,+,-	SPANXD,SPANXA1,SPANXE	129,-108639,186
chr4:7104481-7104917	chr4	+	7104578	7104928	True	NR_027441,NM_152293	chr4,chr4	-,+	FLJ36777,TADA2B	225,-59474
chrX:103265523-103265901	chrX	+	103265560	103265950	True	NM_001002916,NM_001164416	chrX,chrX	-,+	H2BFWT,H2BFM	2356,28565
chr17:62916878-62917266	chr17_ctg5_hap1	-	1233478	1233754	False	NR_026901,NR_037772	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LOC644172,CRHR1	-45090,-63025
chr17:62916878-62917266	chr17_ctg5_hap1	+	494804	495088	False	NM_001193465,NM_014834	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	KIAA1267,LRRC37A	68409,-36200
chr17:62916878-62917266	chr17	+	62916910	62917182	True	NM_199340,NM_001165933	chr17,chr17	-,+	LRRC37A3,RGS9	-2007,216273
chr1:98315091-98316112	chr1	+	98315125	98316161	True	NM_000110,NM_015976	chr1,chr1	-,+	DPYD,SNX7	70516,811074
chr10:69833727-69834439	chr10	+	69833837	69834463	True	NM_015601,NM_032578,NM_022079	chr10,chr10,chr10	-,+,-	HERC4,MYPN,HERC4	690,34786,690
chr15:80190496-80191327	chr15	+	80190537	80191343	True	NM_006441,NM_001199758,NR_028330,NR_037654	chr15,chr15,chr15,chr15	-,-,+,-	MTHFS,MTHFS,C15orf37,MTHFS	-1146,-910,23769,-1198
chr11:30039169-30039946	chr11	+	30039340	30039987	True	NM_002233,NM_000510	chr11,chr11	-,+	KCNA4,FSHB	-763,212575
chr2:102608361-102609294	chr2	+	102608365	102609339	True	NM_173343,NM_004633,NM_001145664	chr2,chr2,chr2	+,+,-	IL1R2,IL1R2,RFX8	6119,-110,-517200
chr7:142469097-142470303	chr7	+	142469215	142470331	True	NM_002770,NM_018646,NR_001296	chr7,chr7,chr7	+,-,+	PRSS2,TRPV6,TRY6	9576,113196,8425
chr4:71461861-71462739	chr4	+	71462258	71462778	True	NM_144646,NM_016519	chr4,chr4	-,+	IGJ,AMBN	69620,-4325
chr13:21518488-21519290	chr13	+	21518685	21519335	True	NM_022459,NM_005870	chr13,chr13	-,+	XPO4,SAP18	-41772,195317
chr13:24001903-24003542	chr13	+	24002020	24003480	True	NM_001204459,NM_014363	chr13,chr13	+,-	TNFRSF19,SACS	141028,4411
chr5:133449698-133449925	chr5	+	133449751	133449937	True	NM_001134851,NR_033449,NM_003202,NM_213648,NM_006930,NM_201632,NM_201634	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,-,+,+	TCF7,TCF7,TCF7,TCF7,SKP1,TCF7,TCF7	1360,1412,464,1360,62837,1360,1360
chr6:52223576-52225272	chr6	+	52224058	52225302	True	NM_133367,NM_002388	chr6,chr6	+,-	PAQR8,MCM3	1623,-74476
chr2:46875614-46877083	chr2	+	46875810	46877142	True	NM_173074,NM_014171	chr2,chr2	-,+	PIGF,CRIPT	-31559,-31543
chr17:15900192-15901269	chr17	+	15900570	15901123	True	NM_001042698,NR_037985,NM_017775,NM_001042697	chr17,chr17,chr17,chr17	-,+,+,-	ZSWIM7,TTC19,TTC19,ZSWIM7	1933,1570,1570,1933
chr7:44888666-44889123	chr7	+	44888668	44889172	True	NM_201436,NM_012412,NM_201516,NM_201517,NM_021130,NM_138635	chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,+,-	H2AFV,H2AFV,H2AFV,H2AFV,PPIA,H2AFV	-943,-943,-943,-943,-52478,-943
chr7:152371619-152372574	chr7	+	152371890	152372533	True	NM_005431,NM_001040135	chr7,chr7	-,+	XRCC2,ACTR3B	774,84317
chr3:32024506-32025160	chr3	+	32024547	32025203	True	NM_017784,NM_001174060,NM_001137674	chr3,chr3,chr3	-,-,+	OSBPL10,OSBPL10,ZNF860	-1205,-1205,-1332
chr6:134273723-134274237	chr6	+	134273724	134274279	True	NM_004865,NM_145176	chr6,chr6	+,-	TBPL1,SLC2A12	21,99560
chrX:15520372-15521888	chrX	+	15520832	15521886	True	NM_003662,NM_001018109,NM_001721,NM_203281	chrX,chrX,chrX,chrX	-,-,+,+	PIR,PIR,BMX,BMX	-9121,-9121,3544,-1990
chr1:42921725-42921940	chr1	+	42921778	42921968	True	NM_032257,NM_001077447,NM_001146192,NM_024664	chr1,chr1,chr1,chr1	-,+,-,+	ZMYND12,PPCS,ZMYND12,PPCS	20,204,20,204
chr6:34205733-34205954	chr6	+	34205751	34205825	True	NM_002131,NM_145899,NM_001008703,NM_145902,NM_145903,NM_145901,NM_145905	chr6,chr6,chr6,chr6,chr6,chr6,chr6	+,+,-,+,+,+,+	HMGA1,HMGA1,C6orf1,HMGA1,HMGA1,HMGA1,HMGA1	-1225,-1225,11129,-1152,-1225,-1152,742
chr10:119806666-119806964	chr10	+	119806759	119807001	True	NR_026940,NM_014904,NR_026941,NR_026939	chr10,chr10,chr10,chr10	+,-,+,+	CASC2,RAB11FIP2,CASC2,CASC2	-478,-645,-478,-478
chr15:101820916-101821513	chr15	+	101821082	101821551	True	NM_024652,NM_018445,NM_203472	chr15,chr15,chr15	+,-,-	LRRK1,SELS,SELS	-361675,-3382,-3382
chr1:153352889-153353128	chr1	+	153352948	153353158	True	NM_005621,NM_002965	chr1,chr1	-,+	S100A12,S100A9	-4873,-22671
chr1:92683916-92684261	chr1	+	92684021	92684217	True	NM_053274,NM_001012425	chr1,chr1	-,+	GLMN,C1orf146	80399,-499
chr6:50683704-50684654	chr6	+	50683726	50684656	True	NM_172238,NM_001037498	chr6,chr6	+,-	TFAP2D,DEFB112	-2520,-667362
chr9:10554819-10555617	chr9	+	10554944	10555632	True	NM_000550,NM_002839	chr9,chr9	+,-	TYRP1,PTPRD	2137753,57147
chr15:41220736-41221088	chr15	+	41221045	41221136	True	NM_019074,NM_133639	chr15,chr15	+,-	DLL4,RHOV	394,-54558
chr5:33887091-33887333	chr5	+	33887158	33887382	True	NM_016568,NM_030955	chr5,chr5	+,-	RXFP3,ADAMTS12	49108,4804
chr11:1942684-1943070	chr11	+	1942833	1943049	True	NM_001042782,NM_001042780,NM_001042781,NR_036185,NM_006757	chr11,chr11,chr11,chr11,chr11	+,+,+,-,+	TNNT3,TNNT3,TNNT3,MIR4298,TNNT3	-2085,-2085,-2085,-62067,-2085
chr9:15425355-15425926	chr9	+	15425528	15425858	True	NM_021144,NM_001039697	chr9,chr9	-,+	PSIP1,SNAPC3	84479,-2800
chr9:124264691-124265197	chr9	+	124264815	124265216	True	NR_003191,NM_032552	chr9,chr9	-,+	GGTA1,DAB2IP	-2509,64182
chr4:41937414-41937922	chr4	+	41937544	41937969	True	NM_018126,NM_003924	chr4,chr4	+,-	TMEM33,PHOX2B	-458,-186557
chr17:37606496-37606742	chr17	+	37606542	37606783	True	NM_004774,NM_015083	chr17,chr17	-,+	MED1,CDK12	801,10955
chr7:138603513-138604072	chr7	+	138603685	138603963	True	NM_001164665,NM_001085429	chr7,chr7	-,+	KIAA1549,TMEM213	62151,-120997
chr8:24815609-24816286	chr8	+	24815761	24816287	True	NM_006158,NM_001105541	chr8,chr8	-,+	NEFL,NEFM	-1630,-43357
chr20:49127392-49127857	chr20	+	49127481	49127834	True	NM_080829,NM_002827	chr20,chr20	-,+	FAM65C,PTPN1	125643,-641
chr19:9414224-9415317	chr19	+	9414278	9415178	True	NM_001202406,NM_198535	chr19,chr19	+,-	ZNF559,ZNF699	19269,667
chr7:21639554-21641051	chr7	+	21639567	21641105	True	NM_003777,NM_001127370	chr7,chr7	+,-	DNAH11,CDCA7L	-56792,344500
chr19:41871607-41872657	chr19	+	41872097	41872515	True	NM_030578,NM_001098825,NM_001098821,NM_001098822,NM_001098823,NM_001098824	chr19,chr19,chr19,chr19,chr19,chr19	-,+,+,+,+,+	B9D2,TMEM91,TMEM91,TMEM91,TMEM91,TMEM91	-2019,-2278,9922,9922,9922,9922
chr19:14226690-14228182	chr19	+	14226843	14227589	True	NR_024282,NM_207518,NM_002730	chr19,chr19,chr19	+,-,-	LOC113230,PRKACA,PRKACA	-43079,-1851,1020
chr3:67698212-67699303	chr3	+	67698250	67699127	True	NM_001177599,NM_003848,NM_213609	chr3,chr3,chr3	-,-,+	SUCLG2,SUCLG2,FAM19A1	5962,5962,354326
chr6:16238847-16239054	chr6	+	16238929	16238999	True	NM_000332,NM_006877	chr6,chr6	-,+	ATXN1,GMPR	522772,-169
chr1:3664022-3665253	chr1	+	3664122	3665065	True	NR_033709,NR_033708,NR_033710,NR_033711,NR_033712,NM_152492	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,+	KIAA0495,KIAA0495,KIAA0495,KIAA0495,KIAA0495,CCDC27	-185,-185,-185,-185,-787,3899
chr10:75340421-75342240	chr10	+	75340821	75342118	True	NM_152586,NM_004922	chr10,chr10	-,+	USP54,SEC24C	-5388,162012
chr20:36976088-36977287	chr20	+	36976111	36976721	True	NM_004139,NR_002910	chr20,chr20	+,-	LBP,SNORA71B	-1277,77313
chr4:82393721-82395037	chr4	+	82393753	82394617	True	NM_152545,NM_001201	chr4,chr4	-,+	RASGEF1B,BMP3	-692,-441685
chr3:38989042-38990269	chr3	+	38989057	38990193	True	NM_020839,NM_014139	chr3,chr3	+,-	WDR48,SCN11A	103313,1909
chr14:32581132-32581932	chr14	+	32581382	32581813	True	NR_027263,NM_001173	chr14,chr14	-,+	C14orf128,ARHGAP5	-35477,-34938
chr17:47493235-47494315	chr17	+	47493359	47494318	True	NM_002634,NM_002507	chr17,chr17	-,+	PHB,NGFR	-1117,78336
chrX:49644576-49646064	chrX	+	49644830	49646100	True	NM_001145073,NR_026742	chrX,chrX	+,-	USP27X,LOC158572	-411,-871
chr15:59280391-59280609	chr15	+	59280394	59280608	True	NM_024755,NM_017610	chr15,chr15	-,+	SLTM,RNF111	-54542,-580
chr20:11897534-11898555	chr20	+	11897551	11898554	True	NM_000214,NM_014962	chr20,chr20	-,+	JAG1,BTBD3	-1242857,10
chr19:46170470-46170935	chr19	+	46170761	46170981	True	NM_000164,NR_037512,NR_030372	chr19,chr19,chr19	+,-,+	GIPR,MIR642B,MIR642A	520,7335,7204
chr19:11971270-11973018	chr19	+	11971351	11972673	True	NM_152262,NM_001080493	chr19,chr19	+,-	ZNF439,ZNF823	4170,-121591
chr15:57532799-57533583	chr15	+	57533103	57533634	True	NM_207040,NR_015419	chr15,chr15	+,-	TCF12,LOC145783	-21503,-322406
chr19:23934782-23936123	chr19	+	23934894	23935695	True	NM_138286,NR_003662	chr19,chr19	-,+	ZNF681,RPSAP58	6054,10120
chr5:179126415-179126757	chr5	+	179126444	179126784	True	NM_001746,NM_001164444,NM_001024649	chr5,chr5,chr5	+,-,+	CANX,CBY3,CANX	-565,-18469,-565
chr17:6983354-6984849	chr17	+	6983516	6984494	True	NM_182906,NM_006344,NM_201566	chr17,chr17,chr17	-,-,+	CLEC10A,CLEC10A,SLC16A13	84,84,-44173
chr3:156046452-156047250	chr3	+	156046482	156047250	True	NM_007107,NM_172159	chr3,chr3	-,+	SSR3,KCNAB1	225780,-37772
chr19:22234694-22234957	chr19	+	22234693	22234834	True	NM_007153,NM_033468	chr19,chr19	-,+	ZNF208,ZNF257	-40948,431
chr20:34232060-34232918	chr20	+	34232138	34232801	True	NM_003915,NM_003116	chr20,chr20	-,+	CPNE1,SPAG4	9085,-28380
chr1:8388013-8388499	chr1	+	8388114	8388430	True	NM_001042682,NM_001080397	chr1,chr1	-,+	RERE,SLC45A1	95367,-3775
chr1:48234996-48235780	chr1	+	48235013	48235789	True	NM_001194986,NM_004474	chr1,chr1	-,+	LOC388630,FOXD2	226823,-333376
chr2:242833206-242833539	chr2	+	242833242	242833490	True	NM_173821,NM_005018	chr2,chr2	+,-	C2orf85,PDCD1	-21407,-32184
chr17:12623630-12624054	chr17	+	12623634	12624065	True	NM_001146313,NM_001165962	chr17,chr17	+,-	MYOCD,ELAC2	-79,297367
chr3:38564086-38565615	chr3	+	38564539	38565639	True	NR_028389,NM_005107	chr3,chr3	-,+	LOC100128640,EXOG	-68228,-26828
chr11:62853513-62854788	chr11	+	62853823	62854701	True	NM_001039752,NM_001136506	chr11,chr11	+,-	SLC22A10,SLC22A24	202728,57042
chr20:38604559-38606108	chr20	+	38604558	38606120	True	NR_033905,NM_005461	chr20,chr20	+,-	DHX35,MAFB	-1013631,711813
chr11:2162571-2162928	chr11	+	2162574	2162929	True	NM_001127598,NR_028043,NM_000612,NM_001007139,NR_030158,NR_028044	chr11,chr11,chr11,chr11,chr11,chr11	-,+,-,-,-,+	IGF2,IGF2AS,IGF2,IGF2,MIR483,IGF2AS	-233,-867,-2370,7955,-7135,-867
chr3:33878705-33879373	chr3	+	33878705	33878979	True	NM_015097,NR_027867	chr3,chr3	-,+	CLASP2,PDCD6IP	-118857,-8631
chr12:32652669-32653526	chr12	+	32653039	32653287	True	NM_001040436,NM_139241	chr12,chr12	-,+	YARS2,FGD4	255656,1753
chr11:111961128-111962025	chr11	+	111961174	111962064	True	NM_003002,NR_028383,NM_012459	chr11,chr11,chr11	+,-,-	SDHD,TIMM8B,TIMM8B	-3658,-3652,-3652
chr5:138719088-138719652	chr5	+	138719089	138719538	True	NM_001033112,NM_016459,NM_005847,NM_152685	chr5,chr5,chr5,chr5	+,-,-,-	PAIP2,MZB1,SLC23A1,SLC23A1	-41006,6124,-50,-50
chr11:86100037-86101231	chr11	+	86101169	86101273	True	NM_001014811,NM_021827	chr11,chr11	-,+	ME3,CCDC81	282017,-15455
chr4:15479927-15481658	chr4	+	15479935	15481618	True	NM_001193534,NM_001080522,NM_020785,NM_001164720	chr4,chr4,chr4,chr4	-,+,+,+	FBXL5,CC2D2A,CC2D2A,CC2D2A	175468,-8509,-8509,-8509
chr5:98105940-98106235	chr5	+	98105956	98106132	True	NM_001012761,NR_033932	chr5,chr5	+,-	RGMB,FLJ35946	-1011,2706
chr19:52510919-52511413	chr19	+	52510978	52511310	True	NM_198480,NM_001199324,NM_024840	chr19,chr19,chr19	-,-,+	ZNF615,ZNF615,ZNF613	223,223,-80346
chr19:13875309-13875620	chr19	+	13875360	13875668	True	NR_036515,NM_014047,NM_001031727,NM_032285	chr19,chr19,chr19,chr19	-,+,+,+	LOC284454,C19orf53,MRI1,MRI1	71485,9588,-74,-74
chr16:31537403-31538684	chr16	+	31537553	31538732	True	NM_022744,NM_016633	chr16,chr16	-,+	C16orf58,AHSP	-17847,470
chr1:219683639-219684961	chr1	+	219683781	219684808	True	NM_138794,NM_018713	chr1,chr1	+,-	LYPLAL1,SLC30A10	-336640,417241
chr3:13587774-13588485	chr3	+	13588016	13588530	True	NM_001004019,NM_001998,NM_024923	chr3,chr3,chr3	+,+,-	FBLN2,FBLN2,NUP210	2094,2094,-126207
chr1:154963750-154964473	chr1	+	154964044	154964119	True	NM_025207,NM_003029,NM_018655,NM_001184892,NM_001184891,NM_201398	chr1,chr1,chr1,chr1,chr1,chr1	+,-,+,+,+,+	FLAD1,SHC1,LENEP,FLAD1,FLAD1,FLAD1	-8335,-17085,1942,-8335,-8335,-8335
chr7:72743198-72745136	chr7	+	72743342	72745118	True	NM_001135211,NM_003602,NM_178125	chr7,chr7,chr7	+,+,-	FKBP6,FKBP6,TRIM50	-1241,-1096,-1257
chr21:39629547-39630336	chr21	+	39629593	39630331	True	NM_002243,NM_005867,NM_170736	chr21,chr21,chr21	+,-,+	KCNJ15,DSCR4,KCNJ15	-984,-136139,-778
chr22:25387582-25387829	chr22	+	25387765	25387832	True	NM_001001663,NM_001145206	chr22,chr22	-,+	TMEM211,KIAA1671	-52451,36108
chr18:74176027-74177633	chr18	+	74176372	74177665	True	NR_015417,NM_014643	chr18,chr18	+,-	LOC284276,ZNF516	62946,29531
chr5:175084716-175085083	chr5	+	175084821	175085121	True	NM_001131055,NM_000794	chr5,chr5	+,-	HRH2,DRD1	-82,-213658
chr16:4476964-4478043	chr16	+	4477227	4477608	True	NM_001135110,NM_024535,NM_005147	chr16,chr16,chr16	+,-,+	DNAJA3,CORO7,DNAJA3	-1428,-10265,-1428
chr4:41361961-41362251	chr4	+	41361968	41362260	True	NM_001112717,NM_173075,NM_014988,NM_001112718	chr4,chr4,chr4,chr4	+,-,+,+	LIMCH1,APBB2,LIMCH1,LIMCH1	543,-145333,543,543
chr19:54826457-54828240	chr19	+	54827164	54828148	True	NM_181879,NM_021250,NM_181986,NM_001005367,NM_181985	chr19,chr19,chr19,chr19,chr19	-,-,-,+,-	LILRA5,LILRA5,LILRA5,TTYH1,LILRA5	-2796,-2755,-2796,98456,-2796
chr4:183958051-183958393	chr4	+	183958050	183958370	True	NR_024008,NR_003612	chr4,chr4	-,+	C4orf38,FAM92A3	62032,447
chr9:133816603-133817223	chr9	+	133816711	133817267	True	NM_001145106,NM_032843,NM_006059	chr9,chr9,chr9	-,-,+	FIBCD1,FIBCD1,LAMC3	-2256,-2472,67236
chr1:74719306-74720843	chr1	+	74719580	74720366	True	NM_015978,NM_001105659	chr1,chr1	+,-	TNNI3K,LRRIQ3	-18566,-55709
chr7:72299304-72299871	chr7	+	72299656	72299910	True	NR_001588,NR_024110,NR_024111,NR_024109,NM_001145441,NM_001145440	chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,-,-	SBDSP1,SBDSP1,SBDSP1,SBDSP1,TYW1B,TYW1B	41,41,41,41,-843,-843
chr6:58183873-58184133	chr6	+	58183992	58184118	True	NM_000947,NR_003660	chr6,chr6	+,-	PRIM2,GUSBP4	-1001621,103656
chr6:58183873-58184133	chr6	-	26686112	26686170	False	NM_013375,NM_024639	chr6,chr6	+,-	ABT1,ZNF322A	-88983,-26149
chr3:58559244-58560623	chr3	+	58559357	58560405	True	NM_001076778,NM_007177,NM_153331	chr3,chr3,chr3	-,-,+	FAM107A,FAM107A,KCTD6	3136,3136,-75316
chr17:7483735-7483942	chr17	+	7483737	7483927	True	NM_001416,NR_002918,NM_004870,NM_001040059,NR_002912,NR_024603,NR_002604,NM_001251,NM_001204510,NM_006942	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,+,+,+,+,-	EIF4A1,SNORA48,MPDU1,CD68,SNORA67,MPDU1,SNORD10,CD68,EIF4A1,SOX15	-7764,-5757,3037,-982,-2515,3037,-3659,-983,-7764,9611
chr10:89571012-89572124	chr10	+	89571151	89571911	True	NM_032810,NR_028492	chr10,chr10	-,+	ATAD1,CFLP1	6056,6158
chr2:737577-738955	chr2	+	737580	738980	True	NM_018968,NM_152834	chr2,chr2	+,-	SNTG2,TMEM18	207573,-60141
chr12:21060736-21062400	chr12	+	21060883	21062450	True	NM_019844,NM_021094	chr12,chr12	+,-	SLCO1B3,SLCO1A2	-97305,425440
chr14:96968612-96968914	chr14	+	96968627	96968947	True	NM_018036,NM_032632	chr14,chr14	-,+	ATG2B,PAPOLA	-138949,-38
chr17:61130320-61130615	chr17	+	61130344	61130666	True	NM_152598,NM_025185	chr17,chr17	-,+	MARCH10,TANC2	-244639,-43497
chr11:86033322-86034034	chr11	+	86033721	86033965	True	NR_024596,NM_007166	chr11,chr11	+,-	C11orf73,PICALM	-19376,-253613
chr1:207661470-207663437	chr1	+	207661499	207663455	True	NR_029832,NM_000651,NM_000573	chr1,chr1,chr1	-,+,+	MIR29C,CR1,CR1	311879,6017,6017
chr1:16840704-16841212	chr1	+	16840895	16841127	True	NR_023386,NR_037446	chr1,chr1	-,+	CROCCP3,MIR3675	-21699,34281
chr3:156014555-156016125	chr3	+	156014663	156016164	True	NM_007107,NM_172159	chr3,chr3	-,+	SSR3,KCNAB1	256860,-5951
chr1:149904557-149905746	chr1	+	149905178	149905744	True	NM_181873,NM_005850,NM_016074,NM_001145862	chr1,chr1,chr1,chr1	-,-,+,-	MTMR11,SF3B4,BOLA1,MTMR11	2572,-5034,-34075,3097
chr16:66584080-66584946	chr16	+	66584151	66584438	True	NM_001204099,NM_001204098,NM_016951,NM_001172645,NM_001172644,NM_001172643,NM_001202509,NM_001040138,NM_004614,NM_181641,NM_181640,NM_016326	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,-,-,-,+,+,-,+,+,+	CKLF-CMTM1,CKLF-CMTM1,CKLF,TK2,TK2,TK2,CKLF-CMTM1,CKLF,TK2,CKLF,CKLF,CKLF	2027,2027,2027,-12,-12,-15,2027,2027,-12,2027,2027,2027
chr10:6188241-6188942	chr10	+	6188250	6188958	True	NM_001145443,NR_036111,NM_000417	chr10,chr10,chr10	+,+,-	PFKFB3,MIR3155,IL2RA	-1458,5200,-83917
chr22:27139226-27140277	chr22	+	27139247	27140325	True	NR_033321,NM_001887	chr22,chr22	+,-	MIAT,CRYBB1	-85852,-125256
chr11:6339386-6340444	chr11	+	6339390	6340340	True	NM_176875,NM_145040	chr11,chr11	+,-	CCKBR,PRKCDBP	-58475,1450
chr22:45564873-45565497	chr22	+	45565254	45565519	True	NM_007172,NR_031651,NM_153645	chr22,chr22,chr22	+,-,+	NUP50,MIR1249,NUP50	-5582,31432,-4756
chr3:46732928-46733473	chr3	+	46732957	46733384	True	NM_001190707,NM_147196,NR_033815,NM_147129	chr3,chr3,chr3,chr3	-,+,-,-	ALS2CL,TMIE,ALS2CL,ALS2CL	1812,9438,1860,1860
chr5:35228051-35229395	chr5	+	35228056	35229412	True	NM_194283,NM_000949	chr5,chr5	+,-	DNAJC21,PRLR	-298409,1461
chr5:9908320-9909931	chr5	+	9908411	9909969	True	NR_027112,NM_012073	chr5,chr5	-,+	LOC285692,CCT5	-4475,340312
chr10:61724047-61725729	chr10	+	61724195	61725750	True	NM_001143774,NR_024340	chr10,chr10	+,-	PHYHIPL,C10orf40	-787020,-3524
chr8:11035771-11037362	chr8	+	11035869	11037328	True	NM_173683,NM_015458	chr8,chr8	-,+	XKR6,MTMR9	21602,104671
chr15:25446046-25447362	chr15	+	25446129	25447287	True	NR_003315,NR_003314,NR_003313,NR_003312,NR_003311,NR_003310,NR_022010,NR_003297,NR_003308,NR_003309,NM_130838,NR_003301,NR_003302,NR_003304,NR_003305,NR_003306,NR_003307	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,+,-,+,+,+,+,+,+	SNORD115-23,SNORD115-22,SNORD115-21,SNORD115-20,SNORD115-19,SNORD115-18,PAR4,SNORD115-5,SNORD115-16,SNORD115-17,UBE3A,SNORD115-9,SNORD115-10,SNORD115-12,SNORD115-13,SNORD115-14,SNORD115-15	9655,7777,4121,4121,-106,-106,9551,-9614,-1585,-106,203416,-9617,-9617,-9617,-7712,-6112,4121
chr9:126119573-126119961	chr9	+	126119728	126119988	True	NM_173689,NR_030332	chr9,chr9	+,-	CRB2,MIR601	-1331,44944
chr3:186353826-186354994	chr3	+	186353830	186355022	True	NM_014375,NM_001134415	chr3,chr3	+,-	FETUB,TBCCD1	3126,-65498
chr8:70858031-70858870	chr8	+	70858324	70858768	True	NM_001128206,NM_030958	chr8,chr8	+,-	SULF1,SLCO5A1	-453347,-111025
chr9:116266121-116266327	chr9	+	116266200	116266332	True	NM_017443,NM_130795	chr9,chr9	-,+	POLE3,RGS3	-93171,-2545
chrX:48828280-48829498	chrX	+	48828362	48829286	True	NM_001167992,NM_004979	chrX,chrX	+,-	PQBP1,KCND1	-72638,-111
chr6:7600883-7602127	chr6	+	7600973	7601767	True	NM_152551,NM_001170693	chr6,chr6	+,-	SNRNP48,CAGE1	-10593,-211031
chr9:71939517-71939804	chr9	+	71939521	71939830	True	NM_001127608,NM_004816,NM_002732	chr9,chr9,chr9	+,+,-	FAM189A2,FAM189A2,PRKACG	-84,4410,-310482
chr7:101274236-101274865	chr7	+	101274386	101274776	True	NM_138403,NM_001202543	chr7,chr7	-,+	MYL10,CUX1	-1810,184407
chr10:99049789-99050048	chr10	+	99049803	99049995	True	NR_037909,NM_005479,NM_032900,NM_001204300	chr10,chr10,chr10,chr10	-,+,-,-	ARHGAP19-SLIT1,FRAT1,ARHGAP19,ARHGAP19	2485,29026,2485,2485
chr1:16090929-16091588	chr1	+	16090928	16091372	True	NM_001024215,NM_001024216,NM_001089591,NM_017556	chr1,chr1,chr1,chr1	+,+,-,+	FBLIM1,FBLIM1,UQCRHL,FBLIM1	15,86,42872,-5724
chr2:145277609-145278172	chr2	+	145277618	145278207	True	NR_033258,NM_001171653,NR_033870,NM_014795	chr2,chr2,chr2,chr2	-,-,+,-	ZEB2,ZEB2,DKFZp686O1327,ZEB2	60,60,147326,60
chr1:155828779-155829182	chr1	+	155828910	155829162	True	NM_001037533,NM_152280,NM_032292	chr1,chr1,chr1	-,+,-	GON4L,SYT11,GON4L	-1938,97,-1938
chr2:70159037-70159523	chr2	+	70159080	70159497	True	NM_152792,NM_002357	chr2,chr2	-,+	ASPRV1,MXD1	29960,-16958
chr19:3478660-3480238	chr19	+	3478821	3480071	True	NM_016263,NM_001136503	chr19,chr19	+,-	FZR1,C19orf77	26223,519
chr6:76464685-76466180	chr6	+	76465008	76466030	True	NM_015687,NM_004999	chr6,chr6	-,+	FILIP1,MYO6	-261512,-6150
chr3:195537869-195538203	chr3	+	195537898	195537980	True	NM_018406,NM_138297,NM_001098516,NM_004532	chr3,chr3,chr3,chr3	-,-,+,-	MUC4,MUC4,MUC20,MUC4	1218,1218,-86851,1218
chr6:37012777-37012984	chr6	+	37012801	37012987	True	NM_173558,NM_014341	chr6,chr6	+,-	FGD2,MTCH1	-39429,-58852
chr6:37012777-37012984	chr12	+	120876244	120876294	False	NM_016399,NM_004373,NM_176818,NR_033684	chr12,chr12,chr12,chr12	-,+,+,+	TRIAP1,COX6A1,GATC,GATC	7971,-391,7946,7946
chr6:37012777-37012984	chr12	+	120878268	120878362	False	NM_016399,NM_004373,NM_176818,NR_033684	chr12,chr12,chr12,chr12	-,+,+,+	TRIAP1,COX6A1,GATC,GATC	5903,-2417,5878,5878
chr2:239229812-239230749	chr2	+	239229852	239230614	True	NM_015650,NM_022817,NM_001139490	chr2,chr2,chr2	+,-,+	TRAF3IP1,PER2,TRAF3IP1	-719,-32645,-719
chr19:36024692-36024932	chr19	+	36024732	36024932	True	NM_001166035,NM_001166034,NM_014364,NM_198538	chr19,chr19,chr19,chr19	-,-,+,-	SBSN,SBSN,GAPDHS,SBSN	-5479,-5479,-469,-5479
chr16:78135948-78136833	chr16	+	78136268	78136856	True	NM_199355,NM_016373,NM_130791,NM_130844	chr16,chr16,chr16,chr16	-,+,+,+	ADAMTS18,WWOX,WWOX,WWOX	-667257,-2768,-2768,-2768
chr13:25873989-25874704	chr13	+	25874420	25874709	True	NM_001008564,NM_004685,NM_014089	chr13,chr13,chr13	+,-,+	NUPL1,MTMR6,NUPL1	956,-12716,956
chr16:2730482-2731604	chr16	+	2730509	2731315	True	NM_031948,NM_018992	chr16,chr16	-,+	PRSS27,KCTD5	39295,1179
chr16:2730482-2731604	chr16	+	2652564	2652624	False	NR_036139,NR_015441	chr16,chr16	-,+	MIR3178,LOC652276	-70558,760
chr3:9292965-9294939	chr3	+	9293176	9294960	True	NM_001114092,NM_014850,NM_001033117	chr3,chr3,chr3	+,-,-	THUMPD3,SRGAP3,SRGAP3	109756,-1865,-1865
chr17:3184314-3184821	chr17	+	3184347	3184869	True	NM_002551,NR_024128	chr17,chr17	-,+	OR3A2,OR3A4	-2079,28669
chr13:19757077-19757374	chr13	+	19757190	19757257	True	NM_006001,NR_034026	chr13,chr13	-,+	TUBA3C,LOC100287114	-1198,161931
chr1:171115505-171116798	chr1	+	171115516	171116817	True	NR_002601,NR_031627	chr1,chr1	+,-	FMO6P,MIR1295	-8688,-44569
chr17:7533748-7534676	chr17	+	7533779	7534459	True	NM_001040,NM_133491,NM_001146279,NM_001146280,NM_001146281,NR_027462	chr17,chr17,chr17,chr17,chr17,chr17	+,-,+,+,+,+	SHBG,SAT2,SHBG,SHBG,SHBG,SHBG	-377,-2585,-377,-377,-377,-2543
chr2:174624757-174625116	chr2	+	174624757	174625137	True	NM_145810,NM_001017371	chr2,chr2	+,-	CDCA7,SP3	-405255,203860
chr6:35182461-35182814	chr6	+	35182514	35182767	True	NM_152753,NM_018679	chr6,chr6	+,-	SCUBE3,TCP11	-375,-73327
chr15:23259576-23260384	chr15	+	23259793	23260223	True	NR_024074,NR_003521	chr15,chr15	+,-	GOLGA8IP,WHAMML1	-4602,-51436
chr15:23259576-23260384	chr15	+	32890630	32890686	False	NM_199357,NR_036650	chr15,chr15	+,-	ARHGAP11A,LOC100288615	17004,-64688
chr15:23259576-23260384	chr15	-	32742811	32742861	False	NR_027470,NM_199357	chr15,chr15	-,+	FAM7A2,ARHGAP11A	-15561,164829
chr15:23259576-23260384	chr15	-	32690452	32690888	False	NR_026859,NM_199357	chr15,chr15	-,+	FAM7A3,ARHGAP11A	36227,216802
chr15:23259576-23260384	chr15	-	28952591	28952641	False	NR_033351,NR_026589	chr15,chr15	-,+	GOLGA8F,WHAMML2	-174448,30087
chr15:23259576-23260384	chr15	+	30379759	30380195	False	NR_026859,NM_175610	chr15,chr15	+,-	FAM7A3,TJP1	15739,-265053
chr15:23259576-23260384	chr15	+	30431859	30432295	False	NM_139320,NR_033933	chr15,chr15	-,+	CHRFAM7A,LOC653075	253625,-3920
chr15:23259576-23260384	chr15	-	30701441	30701491	False	NM_148911,NR_026858	chr15,chr15	-,+	CHRFAM7A,FAM7A1	-15577,163266
chr15:23259576-23260384	chr15	+	30849155	30849205	False	NM_148911,NR_026858	chr15,chr15	-,+	CHRFAM7A,FAM7A1	-163291,15552
chr16:81251370-81251975	chr16	+	81251610	81252014	True	NM_017429,NM_052892,NM_001076780	chr16,chr16,chr16	+,-,-	BCMO1,PKD1L2,PKD1L2	20281,2017,2017
chr3:116164289-116165745	chr3	+	116164561	116165469	True	NR_015391,NM_002338	chr3,chr3	+,-	NCRNA00295,LSAMP	263165,-176
chr7:27699714-27700002	chr7	+	27699795	27699960	True	NM_152740,NM_001079864	chr7,chr7	-,+	HIBADH,TAX1BP1	2715,79777
chr12:46124180-46124416	chr12	+	46124348	46124418	True	NR_028408,NM_152641	chr12,chr12	-,+	LOC400027,ARID2	-2644,-781
chr19:44030950-44031158	chr19	+	44030958	44031207	True	NM_014297,NM_174945	chr19,chr19	-,+	ETHE1,ZNF575	239,6132
chr22:24320822-24321537	chr22	+	24321057	24321397	True	NM_001355,NM_000854,NM_001084392	chr22,chr22,chr22	-,+,-	DDT,GSTT2,DDT	672,916,-4377
chr22:24320822-24321537	chr22	-	24304309	24304649	False	NM_001080843,NM_000854,NM_001084393	chr22,chr22,chr22	-,-,+	GSTT2B,GSTT2,DDTL	-941,-916,4376
chr17:18759672-18760570	chr17	+	18759714	18760377	True	NM_002767,NM_001039999	chr17,chr17	+,-	PRPSAP2,FAM83G	1114,147734
chr18:72923189-72923422	chr18	+	72923210	72923416	True	NM_005786,NM_175907	chr18,chr18	+,-	TSHZ1,ZADH2	-530,-1929
chr4:7105665-7106197	chr4	+	7105691	7106221	True	NR_027441,NM_152293	chr4,chr4	-,+	FLJ36777,TADA2B	-588,-60586
chr18:11909122-11910249	chr18	+	11909242	11910062	True	NM_023075,NM_020412	chr18,chr18	-,+	MPPE1,CHMP1B	-601,-57904
chr12:27682549-27684529	chr12	+	27682740	27684085	True	NM_003622,NM_001146221,NM_001198916,NM_001198915,NM_177444	chr12,chr12,chr12,chr12,chr12	+,-,+,+,+	PPFIBP1,LOC100287284,PPFIBP1,PPFIBP1,PPFIBP1	-5747,240180,-5747,-5747,-5747
chr10:71561503-71561706	chr10	+	71561623	71561703	True	NM_080802,NM_080800,NM_001130103,NM_080801,NM_080798,NM_020999,NM_080805	chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,-,+	COL13A1,COL13A1,COL13A1,COL13A1,COL13A1,NEUROG3,COL13A1	-30,-30,-30,-30,-30,-228413,-30
chr6:4076280-4076956	chr6	+	4076629	4076815	True	NM_001085401,NM_173563	chr6,chr6	+,-	C6orf201,C6orf146	2624,2708
chrX:70573915-70575066	chrX	+	70574613	70574878	True	NM_001171162,NM_004606	chrX,chrX	-,+	ZMYM3,TAF1	-99566,11235
chr22:35874576-35875123	chr22	+	35874734	35875040	True	NM_005368,NM_014310	chr22,chr22	-,+	MB,RASD2	138394,62311
chr20:30098084-30099260	chr20	+	30098217	30099184	True	NM_001037500,NM_178582,NM_178580,NM_030789,NM_178581	chr20,chr20,chr20,chr20,chr20	-,+,+,+,+	DEFB124,HM13,HM13,HM13,HM13	-37401,3056,3056,3056,3056
chr20:3759964-3761841	chr20	+	3760179	3761804	True	NM_001810,NM_015417,NM_004358	chr20,chr20,chr20	-,-,+	CENPB,SPEF1,CDC25B	5583,348,14596
chr5:25292607-25294471	chr5	+	25293446	25294481	True	NR_037896,NM_020227	chr5,chr5	-,+	LOC340107,PRDM9	-452754,-1785782
chr1:3690608-3690980	chr1	+	3690666	3691011	True	NM_020710,NM_001163724	chr1,chr1	-,+	LRRC47,LOC388588	22107,-1365
chr11:86028127-86029066	chr11	+	86028127	86029076	True	NR_024596,NM_007166	chr11,chr11	+,-	C11orf73,PICALM	-13788,-248019
chr10:56538151-56539361	chr10	+	56538215	56539386	True	NM_001190478,NM_001142771	chr10,chr10	+,-	MTRNR2L5,PCDH15	819363,21715
chr17:27167306-27167630	chr17	+	27167460	27167617	True	NM_018182,NM_001077498,NM_005702	chr17,chr17,chr17	-,-,+	C17orf63,C17orf63,ERAL1	2275,2275,14425
chr17:44927372-44928311	chr17	+	44927615	44928358	True	NM_003396,NM_030753	chr17,chr17	+,-	WNT9B,WNT3	609,-31533
chr5:64063951-64064531	chr5	+	64063990	64064580	True	NM_173829,NM_005869	chr5,chr5	-,+	SREK1IP1,CWC27	-4,174
chr6:66338512-66340450	chr6	+	66338910	66340242	True	NR_026540,NM_198283	chr6,chr6	+,-	MCART3P,EYS	157529,-49213
chr20:3450489-3451209	chr20	+	3450519	3451257	True	NM_139321,NM_001009984,NM_139322	chr20,chr20,chr20	+,-,+	ATRN,C20orf194,ATRN	407,-62264,407
chr3:164911937-164912390	chr3	+	164911974	164912378	True	NM_001122752,NM_014926	chr3,chr3	+,-	SERPINI1,SLITRK3	2541053,2141
chr5:72675977-72676478	chr5	+	72676020	72676508	True	NM_004472,NM_001037637	chr5,chr5	-,+	FOXD1,BTF3	67894,117741
chr20:360235-361050	chr20	+	360370	360996	True	NM_021158,NM_144628	chr20,chr20	+,-	TRIB3,TBC1D20	311,82241
chr8:143810003-143810448	chr8	+	143810007	143810233	True	NM_016647,NM_020427	chr8,chr8	+,-	C8orf55,SLURP1	-1437,13646
chr5:172070919-172072069	chr5	+	172071033	172072081	True	NM_001142651,NM_004417	chr5,chr5	+,-	NEURL1B,DUSP1	-2809,126172
chr4:146857366-146857660	chr4	+	146857372	146857586	True	NM_007080,NM_178835	chr4,chr4	+,-	LSM6,ZNF827	239248,2071
chr4:42152765-42152967	chr4	+	42152812	42152872	True	NM_207406,NM_006345,NM_001159547	chr4,chr4,chr4	-,+,-	BEND4,SLC30A9,BEND4	2073,-160340,2073
chr3:37904004-37904634	chr3	+	37904119	37904481	True	NM_005808,NM_001008392,NM_001130964	chr3,chr3,chr3	+,+,-	CTDSPL,CTDSPL,PLCD1	-502,-502,161847
chrX:35937037-35937872	chrX	+	35937059	35937894	True	NM_152632,NM_031442	chrX,chrX	+,-	CXorf22,TMEM47	-44,-1261654
chr11:119073967-119074794	chr11	+	119074034	119074129	True	NM_001145018,NM_005188	chr11,chr11	-,+	CCDC153,CBL	-7450,2860
chr10:30916001-30916836	chr10	+	30916023	30916813	True	NM_183058,NM_005204	chr10,chr10	-,+	LYZL2,MAP3K8	1884,-193215
chr19:52003928-52004262	chr19	+	52003931	52004211	True	NM_053003,NM_033329,NM_001080405	chr19,chr19,chr19	-,-,+	SIGLEC12,SIGLEC12,CEACAM18	882,-284,-24144
chr19:52003928-52004262	chr19	-	51646630	51646694	False	NM_014385,NM_145232,NM_016543	chr19,chr19,chr19	+,-,+	SIGLEC7,CTU1,SIGLEC7	-1123,-34983,-1123
chr7:140096922-140097486	chr7	+	140097272	140097528	True	NM_207113,NM_032295,NM_001008749	chr7,chr7,chr7	-,-,+	SLC37A3,SLC37A3,RAB19	837,837,6314
chr4:5051607-5051934	chr4	+	5051607	5051990	True	NM_018659,NM_018401	chr4,chr4	-,+	CYTL1,STK32B	-30410,1536
chr4:52959863-52960228	chr4	+	52959863	52960274	True	NM_145263,NM_000232	chr4,chr4	+,-	SPATA18,SGCB	-42321,-55378
chr5:149736761-149737011	chr5	+	149736762	149737041	True	NM_001135244,NM_001135243,NM_001195141,NM_001135245,NM_000356,NM_001012301,NM_001008657	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,-,+	TCOF1,TCOF1,TCOF1,TCOF1,TCOF1,ARSI,TCOF1	160,160,160,160,160,-54237,160
chr20:44076161-44076392	chr20	+	44076168	44076424	True	NM_006103,NM_006652	chr20,chr20	+,-	WFDC2,SPINT3	21969,67890
chr16:4904193-4905774	chr16	+	4904677	4905297	True	NM_001079514,NM_016936,NM_032569	chr16,chr16,chr16	+,+,-	UBN1,UBN1,GLYR1	-6822,-2657,-7374
chr11:64889235-64889730	chr11	+	64889254	64889704	True	NM_001997,NR_037568,NR_037567,NM_014205,NM_003273,NM_004927	chr11,chr11,chr11,chr11,chr11,chr11	-,+,+,-,+,+	FAU,MRPL49,MRPL49,ZNHIT2,TM7SF2,MRPL49	18,11,-2,-4084,-9964,11
chr20:35487714-35489298	chr20	+	35487772	35489120	True	NM_080628,NM_080627,NM_199181	chr20,chr20,chr20	+,-,-	C20orf118,KIAA0889,KIAA0889	15449,3017,18
chr19:55865209-55865659	chr19	+	55865246	55865442	True	NM_144613,NM_032701,NM_001145402	chr19,chr19,chr19	-,+,-	COX6B2,SUV420H2,FAM71E2	790,-14076,9228
chr1:155581579-155583520	chr1	+	155582158	155583251	True	NM_018116,NM_018489	chr1,chr1	+,-	MSTO1,ASH1L	-2202,-49834
chr1:224799857-224800889	chr1	+	224799857	224800670	True	NM_152495,NM_025160	chr1,chr1	+,-	CNIH3,WDR26	3508,-177856
chr19:11036437-11037061	chr19	+	11036456	11036548	True	NM_024029,NM_138358	chr19,chr19	-,+	YIPF2,C19orf52	2859,2875
chr19:51892923-51893524	chr19	+	51892985	51893571	True	NM_001161748,NM_001193623,NR_033235,NM_030657	chr19,chr19,chr19,chr19	-,-,+,-	LIM2,LOC147646,LOC100129083,LIM2	-1775,307,25588,-1775
chr3:127839671-127839979	chr3	+	127839834	127839945	True	NM_021937,NM_003707	chr3,chr3	+,-	EEFSEC,RUVBL1	32367,2785
chr3:119418423-119420123	chr3	+	119418441	119420164	True	NM_033364,NM_005694	chr3,chr3	+,-	C3orf15,COX17	1704,-22198
chr15:89876483-89876918	chr15	+	89876710	89876808	True	NM_001126131,NR_029692,NM_002693	chr15,chr15,chr15	-,+,-	POLG,MIR9-3,POLG	1268,34439,1268
chr1:38260488-38261180	chr1	+	38260614	38261180	True	NM_001031740,NM_152496,NM_001113482,NM_024640	chr1,chr1,chr1,chr1	+,+,+,-	MANEAL,MANEAL,MANEAL,YRDC	-891,-21,-891,12735
chr3:119814646-119815774	chr3	+	119814688	119815384	True	NM_002093,NM_001146156,NM_022002	chr3,chr3,chr3	-,-,+	GSK3B,GSK3B,NR1I2	-1424,-1424,-313182
chr8:71306549-71307629	chr8	+	71307019	71307547	True	NM_006540,NM_001011720	chr8,chr8	-,+	NCOA2,XKR9	8523,274052
chr15:69590277-69590850	chr15	+	69590317	69590859	True	NM_017705,NM_006305	chr15,chr15	+,-	PAQR5,ANP32A	434,-477056
chr8:124545970-124546187	chr8	+	124546048	124546116	True	NM_148177,NM_018024,NM_058229	chr8,chr8,chr8	-,+,-	FBXO32,WDYHV1,FBXO32	-1665,-117137,7380
chr19:14064688-14065050	chr19	+	14064706	14065076	True	NM_138353,NM_001146255,NM_001146254	chr19,chr19,chr19	+,-,-	DCAF15,PODNL1,PODNL1	-1438,-502,-502
chr19:52955182-52955747	chr19	+	52955398	52955484	True	NM_001099694,NM_001105549	chr19,chr19	+,-	ZNF578,ZNF83	1344,186220
chr8:73918063-73919575	chr8	+	73918165	73919245	True	NM_003218,NM_153225,NM_017489	chr8,chr8,chr8	+,-,+	TERF1,C8orf84,TERF1	1851,86312,1851
chr15:25295796-25296239	chr15	+	25295821	25296227	True	NR_003317,NR_003316,NR_003324,NR_001289,NR_003318,NM_130838,NR_003319,NR_001295	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,-,+,+	SNORD116-2,SNORD116-1,SNORD116-9,SNORD109B,SNORD116-3,UBE3A,SNORD116-4,SNORD109A	3128,395,5778,-8751,5778,354476,8456,-8751
chr15:35378881-35379889	chr15	+	35379014	35379912	True	NM_014106,NR_003144	chr15,chr15	-,+	ZNF770,LOC723972	-98517,149614
chr16:28873442-28873777	chr16	+	28873473	28873603	True	NM_001145812,NM_001145797,NM_001145796,NM_001145795,NM_015503,NM_003321	chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,-	SH2B1,SH2B1,SH2B1,SH2B1,SH2B1,TUFM	1692,1474,1474,1474,1710,-15744
chr17:40688768-40689252	chr17	+	40688846	40689208	True	NM_000263,NM_013290	chr17,chr17	+,-	NAGLU,PSMC3IP	-946,40589
chr19:9731571-9731809	chr19	+	9731694	9731792	True	NM_001048241,NM_152289	chr19,chr19	+,-	UBL5,ZNF561	206775,174
chr9:80645554-80645759	chr9	+	80645673	80645759	True	NM_001098802,NM_002072	chr9,chr9	+,-	CEP78,GNAQ	205231,510
chr5:179124976-179125396	chr5	+	179124979	179125348	True	NM_001746,NM_001164444,NM_001024649	chr5,chr5,chr5	+,-,+	CANX,CBY3,CANX	581,-17004,581
chr11:70994795-70995237	chr11	+	70995025	70995257	True	NM_018161,NM_012309	chr11,chr11	+,-	NADSYN1,SHANK2	168959,-59217
chr6:14743055-14744891	chr6	+	14743107	14744493	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	502033,918846
chr7:130022643-130023287	chr7	+	130023096	130023306	True	NM_001868,NM_018718	chr7,chr7	+,-	CPA1,TSGA14	-2857,57598
chrX:138286677-138287037	chrX	+	138286758	138286945	True	NR_028597,NM_001139501,NM_001139500,NM_001139498	chrX,chrX,chrX,chrX	+,-,-,-	SRD5A1P1,FGF13,FGF13,FGF13	242032,290,290,290
chr10:118430168-118431774	chr10	+	118430192	118431688	True	NM_005396,NM_144661	chr10,chr10	+,-	PNLIPRP2,C10orf82	-49778,-711
chr2:27711179-27711763	chr2	+	27711409	27711696	True	NM_022823,NM_015662,NM_001486	chr2,chr2,chr2	-,-,+	FNDC4,IFT172,GCKR	6483,928,8009
chr17:25602191-25602665	chr17	+	25602191	25602637	True	NM_015626,NM_000625	chr17,chr17	+,-	WSB1,NOS2	18468,524968
chr18:21852304-21853917	chr18	+	21852303	21853806	True	NR_031724,NM_018030	chr18,chr18	+,-	MIR320C2,OSBPL1A	47843,-107
chr7:44040747-44041268	chr7	+	44040954	44041082	True	NM_175064,NR_003655	chr7,chr7	+,-	SPDYE1,POLR2J4	-516,17716
chr4:148602657-148603006	chr4	+	148602950	148603022	True	NM_024605,NM_138364	chr4,chr4	+,-	ARHGAP10,PRMT10	50430,2308
chr21:38581542-38582440	chr21	+	38581547	38582327	True	NM_006052,NR_026719	chr21,chr21	-,+	DSCR3,DSCR9	57556,-643
chr16:2261712-2261955	chr16	+	2261807	2261991	True	NM_001199174,NM_001199175,NM_001199173,NM_182563,NM_022372,NM_001042371	chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,-,+,-	MLST8,MLST8,MLST8,C16orf79,MLST8,PGP	-6126,-6680,-6680,-738,-6680,2881
chr4:6382873-6383961	chr4	+	6383085	6383987	True	NM_006005,NM_181876	chr4,chr4	+,-	WFS1,PPP2R2C	-111559,-30
chr2:180401891-180402186	chr2	+	180402071	180402195	True	NM_001113398,NM_019091	chr2,chr2	-,+	ZNF385B,PLEKHA3	25176,-1056928
chr15:65670666-65671846	chr15	+	65670798	65671722	True	NM_004884,NM_016395	chr15,chr15	-,+	IGDCC3,PTPLAD1	-420,151104
chr7:44886132-44886734	chr7	+	44886294	44886744	True	NM_201436,NM_012412,NM_201516,NM_201517,NM_021130,NM_138635	chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,+,-	H2AFV,H2AFV,H2AFV,H2AFV,PPIA,H2AFV	1035,1035,1035,1035,-50114,1035
chr7:5598489-5598737	chr7	+	5598623	5598729	True	NM_001101,NM_003088	chr7,chr7	-,+	ACTB,FSCN1	-28391,33724
chr17:30592088-30592593	chr17	+	30592094	30592586	True	NM_022344,NM_138328	chr17,chr17	-,+	C17orf75,RHBDL3	76653,608
chr15:71087641-71088918	chr15	+	71087663	71088773	True	NM_018003,NM_001199017	chr15,chr15	-,+	UACA,LRRC49	-31813,96154
chr19:9239049-9239675	chr19	+	9239048	9239210	True	NM_001190791,NM_001001958	chr19,chr19	+,-	ZNF317,OR7G3	11845,-1422
chr3:52477967-52478963	chr3	+	52478054	52478888	True	NM_003280,NM_020163,NM_007184	chr3,chr3,chr3	-,-,+	TNNC1,SEMA3G,NISCH	9219,205,10635
chr1:46897671-46897947	chr1	+	46897670	46897926	True	NM_001097611,NM_001441	chr1,chr1	-,+	KNCN,FAAH	119011,-37782
chr17:56085561-56085896	chr17	+	56085588	56085658	True	NR_034041,NM_001078166,NM_006924,NM_080677	chr17,chr17,chr17,chr17	-,-,-,+	SRSF1,SRSF1,SRSF1,DYNLL2	-881,-881,-881,75121
chr1:156735558-156736586	chr1	+	156735676	156736616	True	NM_001126050,NM_005973	chr1,chr1	-,+	HDGF,PRCC	-13436,657
chr7:140878592-140879709	chr7	+	140878695	140879689	True	NM_053035,NM_001195278	chr7,chr7	-,+	MRPS33,LOC100131199	-163914,-104714
chr19:49889685-49890979	chr19	+	49890332	49890916	True	NM_144688,NM_003598	chr19,chr19	+,-	CCDC155,TEAD2	558,-24618
chr15:69096585-69097895	chr15	+	69096635	69097933	True	NR_031680,NR_036197,NR_026808	chr15,chr15,chr15	+,-,-	MIR548H4,MIR4312,C15orf28	18369,-2371,1557
chr12:109211273-109212688	chr12	+	109211369	109212560	True	NM_001917,NM_001161331	chr12,chr12	+,-	DAO,SSH1	61296,8825
chr20:61201013-61201227	chr20	+	61201114	61201184	True	NR_033263,NR_029676	chr20,chr20	-,+	C20orf200,MIR133A2	-52346,-39046
chr19:57700424-57702018	chr19	+	57700740	57702002	True	NM_001012729,NM_003417	chr19,chr19	-,+	DUXA,ZNF264	-21884,865
chr13:26622817-26623393	chr13	+	26622819	26623304	True	NM_001260,NM_001007538	chr13,chr13	+,-	CDK8,SHISA2	205451,1945
chr11:71156119-71157864	chr11	+	71156155	71157862	True	NM_018161,NM_001360,NM_001163817	chr11,chr11,chr11	+,-,-	NADSYN1,DHCR7,DHCR7	6354,1665,1665
chrY:23565630-23566574	chrY	+	23565923	23566613	True	NR_001574,NM_001006121	chrY,chrY	-,+	RBMY2EP,RBMY1B	-2475,106610
chr13:114462982-114463182	chr13	+	114463143	114463203	True	NM_182614,NR_028064	chr13,chr13	+,-	FAM70B,LOC100130386	-978,-9081
chr11:35683973-35684303	chr11	+	35683996	35684281	True	NM_015430,NM_017583	chr11,chr11	-,+	PAMR1,TRIM44	-136820,71
chr17:6457005-6458526	chr17	+	6457227	6458527	True	NM_001165966,NM_031220,NM_032731	chr17,chr17,chr17	-,-,+	PITPNM3,PITPNM3,TXNDC17	1400,1400,85694
chr10:115941550-115942736	chr10	+	115941650	115942784	True	NR_031747,NM_198795,NM_018017	chr10,chr10,chr10	-,+,-	MIR2110,TDRD1,C10orf118	-7712,-2683,-7286
chr2:23680603-23680996	chr2	+	23680930	23681006	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	468978,-72683
chr2:127962929-127963457	chr2	+	127962978	127963362	True	NM_001001665,NM_000312	chr2,chr2	-,+	CYP27C1,PROC	31,212633
chr12:56549567-56549891	chr12	+	56549613	56549797	True	NM_021019,NM_002475,NM_079423,NM_001130420,NM_001199629	chr12,chr12,chr12,chr12,chr12	+,+,+,-,+	MYL6,MYL6B,MYL6,SMARCC2,MYL6B	2247,-3460,2247,33604,-3460
chr2:60781246-60781511	chr2	+	60781363	60781537	True	NM_022894,NM_022893,NM_138559,NM_018014	chr2,chr2,chr2,chr2	+,-,-,-	PAPOLG,BCL11A,BCL11A,BCL11A	201827,-730,-730,-730
chr1:148556807-148557312	chr1	+	148556827	148557121	True	NM_001164262,NM_173638,NM_001170755	chr1,chr1,chr1	-,+,+	PPIAL4F,NBPF15,NBPF15	-354291,3725,1066
chr1:148556807-148557312	chr1	+	144594560	144594611	False	NM_001037675,NR_003242	chr1,chr1	+,-	NBPF9,C1orf152	20347,18167
chr21:26731601-26732602	chr21	+	26731633	26732450	True	NR_024027,NR_001458	chr21,chr21	-,+	NCRNA00158,MIR155HG	71620,202006
chr20:13761085-13762817	chr20	+	13761260	13762872	True	NM_001039375,NR_029377,NM_024120,NM_016649	chr20,chr20,chr20,chr20	+,+,+,-	C20orf7,C20orf7,C20orf7,ESF1	2799,2799,2799,2717
chr6:5975821-5977439	chr6	+	5975988	5977393	True	NM_016588,NM_004271	chr6,chr6	-,+	NRN1,LY86	30290,611540
chr17:7623844-7624417	chr17	+	7623908	7624296	True	NM_001126114,NM_020877	chr17,chr17	-,+	TP53,DNAH2	-33045,-920
chr15:56259947-56260843	chr15	+	56260117	56260881	True	NM_198524,NM_006154	chr15,chr15	+,-	TEX9,NEDD4	396762,25004
chr9:35728491-35728712	chr9	+	35728545	35728731	True	NM_006289,NM_006368	chr9,chr9	-,+	TLN1,CREB3	3711,3585
chr21:43491694-43492298	chr21	+	43491851	43492343	True	NM_173568,NR_027243,NM_001199527,NM_001004416,NM_001199528	chr21,chr21,chr21,chr21,chr21	+,-,+,+,+	UMODL1,C21orf128,UMODL1,UMODL1,UMODL1	-476,36351,-8834,-476,-8834
chr8:86048803-86049150	chr8	+	86048803	86049002	True	NM_001099670,NM_033402	chr8,chr8	-,+	C8orf59,LRRCC1	83698,-29536
chr5:95067316-95067616	chr5	+	95067330	95067538	True	NM_031952,NM_014899	chr5,chr5	-,+	SPATA9,RHOBTB3	-48616,-531
chr2:69663169-69664147	chr2	+	69663421	69664098	True	NM_001002755,NM_001153,NM_001002757,NM_001002756,NM_015700	chr2,chr2,chr2,chr2,chr2	-,+,-,-,-	NFU1,ANXA4,NFU1,NFU1,NFU1	706,305028,706,706,706
chr5:177558384-177559296	chr5	+	177558427	177558936	True	NM_022762,NM_001034833	chr5,chr5	+,-	RMND5B,NHP2	-450,22075
chr5:177558384-177559296	chr5	-	177557466	177557516	False	NM_022762,NM_001034833	chr5,chr5	+,-	RMND5B,NHP2	511,23495
chr15:33603881-33604139	chr15	+	33603885	33604139	True	NM_001036,NM_001103184	chr15,chr15	+,-	RYR3,FMN1	-759,-243800
chr2:220380065-220380493	chr2	+	220380116	220380458	True	NM_001195731,NM_018674,NM_182847	chr2,chr2,chr2	-,+,+	CHPF,ACCN4,ACCN4	27411,-1275,-1275
chr5:38454394-38455139	chr5	+	38454607	38454953	True	NM_001127671,NM_182801	chr5,chr5	-,+	LIFR,EGFLAM	101845,-9029
chr12:111358637-111359087	chr12	+	111358670	111358848	True	NM_000432,NR_036513	chr12,chr12	-,+	MYL2,LOC100131138	-266,15557
chr3:48479549-48480896	chr3	+	48479788	48480746	True	NM_130384,NM_001130082,NM_024661,NM_002673,NM_032166,NM_015933	chr3,chr3,chr3,chr3,chr3,chr3	+,-,-,-,+,+	ATRIP,PLXNB1,CCDC51,PLXNB1,ATRIP,CCDC72	7471,-8328,833,-8916,7471,939
chr12:67661678-67663111	chr12	+	67661845	67662811	True	NM_021150,NM_018448	chr12,chr12	-,+	GRIP1,CAND1	-588920,249
chrX:102764824-102766146	chrX	+	102765110	102765832	True	NM_001006935,NM_080879	chrX,chrX	+,-	TCEAL4,RAB40A	74586,8639
chr8:41434693-41434895	chr8	+	41434758	41434898	True	NM_152568,NM_178819	chr8,chr8	-,+	NKX6-3,AGPAT6	70030,808
chr8:122153855-122155256	chr8	+	122153964	122155276	True	NR_002835,NM_021021	chr8,chr8	+,-	HAS2-AS1,SNTB1	496309,-329655
chr2:37411080-37411897	chr2	+	37411315	37411782	True	NR_037879,NM_001032377	chr2,chr2	+,-	LOC100505876,SULT6B1	11852,3965
chr11:926248-926505	chr11	+	926416	926480	True	NM_001142675,NM_012305	chr11,chr11	-,+	CHID1,AP2A2	-11358,-626
chr1:54519468-54520406	chr1	+	54519610	54520444	True	NM_004872,NM_153035	chr1,chr1	-,+	TMEM59,TCEANC2	-499,-387
chr2:177134509-177134989	chr2	+	177134513	177134883	True	NR_033979,NM_006554,NR_027850	chr2,chr2,chr2	-,+,+	LOC401022,MTX2,MTX2	-80827,-441,-441
chr2:101925290-101925629	chr2	+	101925407	101925571	True	NM_173647,NM_017546	chr2,chr2	-,+	RNF149,C2orf29	-229,-56113
chr15:74977666-74978387	chr15	+	74977790	74978094	True	NM_001142443,NM_000761	chr15,chr15	-,+	EDC3,CYP1A2	10342,63089
chr3:119182199-119182533	chr3	+	119182261	119182515	True	NM_018266,NM_152305,NR_024265	chr3,chr3,chr3	-,+,+	TMEM39A,POGLUT1,POGLUT1	6,5269,5269
chr19:33861389-33863126	chr19	+	33861400	33862946	True	NM_001806,NM_004364	chr19,chr19	+,-	CEBPG,CEBPA	1662,-67970
chr6:27180487-27181163	chr6	+	27180619	27180965	True	NM_005865,NM_080593	chr6,chr6	+,-	PRSS16,HIST1H2BK	34536,-65982
chr5:130970908-130971145	chr5	+	130970966	130971176	True	NM_001164389,NM_001164388,NM_016340,NM_001164390,NM_001164386,NM_001164387,NM_020240	chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,-,-,+	RAPGEF6,RAPGEF6,RAPGEF6,RAPGEF6,RAPGEF6,RAPGEF6,CDC42SE2	-37,-37,-37,-37,-37,-37,-371315
chr19:4770217-4770562	chr19	+	4770249	4770469	True	NR_029607,NR_027148,NM_139159	chr19,chr19,chr19	+,+,-	MIR7-3,C19orf30,DPP9	212,-1183,-46394
chr17:43698168-43698437	chr17_ctg5_hap1	+	564100	564278	False	NM_001193465,NR_034172	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	KIAA1267,LOC644246	-653,31158
chr17:43698168-43698437	chr17_ctg5_hap1	-	1169677	1169855	False	NR_027295,NR_026901,NR_037772,NR_026680	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	-,+,-,-	MGC57346,LOC644172,CRHR1,MGC57346	377,18583,648,646
chr17:43698168-43698437	chr17	+	43698307	43698485	True	NR_027295,NR_026901,NR_037772,NR_026680	chr17,chr17,chr17,chr17	+,-,+,+	MGC57346,LOC644172,CRHR1,MGC57346	-377,-18559,-648,-646
chr17:43698168-43698437	chr17	-	44301959	44302137	False	NM_001193465,NR_034172	chr17,chr17	-,+	KIAA1267,LOC644246	653,-31071
chr1:202111943-202112498	chr1	+	202112024	202112518	True	NM_004767,NM_138795	chr1,chr1	+,-	GPR37L1,ARL8A	-20046,1398
chr17:45918148-45918412	chr17	+	45918273	45918363	True	NM_138355,NR_037575,NM_148887,NM_001145023,NM_033413,NM_145255	chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,+,-	SCRN2,MRPL10,MRPL10,SCRN2,LRRC46,MRPL10	386,-9366,-9366,386,-9331,-9366
chr17:53806379-53806839	chr17	+	53806381	53806862	True	NM_021213,NM_018286,NM_001099640	chr17,chr17,chr17	+,-,-	PCTP,TMEM100,TMEM100	21477,-6156,2670
chrX:47965722-47966822	chrX	+	47966016	47966484	True	NM_001205103,NR_028366,NR_033730	chrX,chrX,chrX	+,+,-	LOC100509575,SSX6,ZNF630	892,882,-34991
chr17:8213745-8214096	chr17	+	8213781	8213993	True	NM_025014,NM_201520,NM_173728	chr17,chr17,chr17	+,-,+	ARHGEF15,SLC25A35,ARHGEF15	146,-15611,-276
chr2:198838424-198839585	chr2	+	198838533	198839401	True	NM_006226,NM_197970	chr2,chr2	+,-	PLCL1,BOLL	-169164,-187595
chr8:101117947-101118255	chr8	+	101117947	101118277	True	NM_015668,NM_005034	chr8,chr8	-,+	RGS22,POLR2K	117,44561
chr15:49320099-49321186	chr15	+	49320099	49320888	True	NM_001001556,NM_001193489	chr15,chr15	+,-	GALK2,SECISBP2L	127087,17923
chr2:113339308-113340624	chr2	+	113339523	113340647	True	NM_032309,NR_033871	chr2,chr2	+,-	CHCHD5,FLJ42351	1388,61161
chr16:3066008-3066640	chr16	+	3066020	3066478	True	NM_024339,NM_001142350,NM_017885,NM_001002017,NM_001002018,NM_021195,NM_020982,NM_016639	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,-,-,-,-,+,+	THOC6,THOC6,HCFC1R1,HCFC1R1,HCFC1R1,CLDN6,CLDN9,TNFRSF12A	7553,7553,7865,7865,7865,1766,-3614,3834
chr2:191883481-191885006	chr2	+	191883520	191884972	True	NM_139266,NM_014905,NM_007315	chr2,chr2,chr2	-,+,-	STAT1,GLS,STAT1	-4544,-138031,-4544
chr2:6642440-6643940	chr2	+	6642440	6643925	True	NM_207315,NM_080657	chr2,chr2	-,+	CMPK2,RSAD2	362061,373870
chr6:41709356-41709980	chr6	+	41709489	41709811	True	NM_001167827,NM_007162,NM_013397,NM_001166424,NM_002630	chr6,chr6,chr6,chr6,chr6	-,-,+,-,-	TFEB,TFEB,PRICKLE4,PGC,PGC	-5492,-6691,38688,5378,5378
chr2:70122985-70123964	chr2	+	70123032	70123535	True	NM_006857,NR_037862,NM_152792	chr2,chr2,chr2	+,+,-	SNRNP27,SNRNP27,ASPRV1	-2020,-2020,65919
chr11:66444240-66444517	chr11	+	66444239	66444495	True	NM_001198844,NM_031492	chr11,chr11	+,-	RBM4,RBM4B	-38202,830
chr11:66444240-66444517	chr11	-	66407237	66407355	False	NM_002896,NM_001198844,NM_031492,NM_001198843	chr11,chr11,chr11,chr11	+,+,-,+	RBM4,RBM4,RBM4B,RBM4	-1200,-1200,37970,-1200
chr1:155225684-155226072	chr1	+	155225716	155226038	True	NM_020897,NM_198264,NM_052837,NM_006589,NM_005698	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	HCN3,FAM189B,SCAMP3,FAM189B,SCAMP3	21335,-442,6207,-442,6207
chr7:150653113-150654296	chr7	+	150653162	150654034	True	NM_172057,NM_000603,NM_001204798	chr7,chr7,chr7	-,+,-	KCNH2,NOS3,KCNH2	-245,34109,-245
chr22:29714358-29715896	chr22	+	29714402	29715536	True	NM_152237,NM_001007279,NM_006477	chr22,chr22,chr22	+,-,-	GAS2L1,RASL10A,RASL10A	-11456,-2654,-2654
chr7:140867578-140867910	chr7	+	140867655	140867945	True	NM_053035,NM_001195278	chr7,chr7	-,+	MRPS33,LOC100131199	-152874,-93674
chr1:228337965-228338314	chr1	+	228338039	228338273	True	NM_181465,NM_020435,NM_001159391	chr1,chr1,chr1	-,+,+	MRPL55,GJC2,GUK1	-41026,-537,-5686
chr11:34938491-34939050	chr11	+	34938673	34939061	True	NM_015957,NM_003477,NM_001166158,NM_001135024	chr11,chr11,chr11,chr11	-,+,+,+	APIP,PDHX,PDHX,PDHX	-734,-1047,-1047,-1047
chr3:194089471-194090340	chr3	+	194089590	194090108	True	NM_130830,NM_001135057,NR_033929	chr3,chr3,chr3	-,-,+	LRRC15,LRRC15,FLJ34208	414,414,117760
chr4:41212173-41213422	chr4	+	41212230	41213003	True	NM_173075,NM_001166050,NM_004307,NM_004181	chr4,chr4,chr4,chr4	-,-,-,+	APBB2,APBB2,APBB2,UCHL1	3685,3685,3685,45894
chr2:208575411-208576019	chr2	+	208575523	208575987	True	NM_001142300,NM_152523,NM_003468	chr2,chr2,chr2	+,+,-	CCNYL1,CCNYL1,FZD5	276,276,58214
chrX:129306027-129306329	chrX	+	129306099	129306303	True	NM_001130847,NM_004794,NM_004208,NM_145812,NM_145813	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	AIFM1,RAB33A,AIFM1,AIFM1,AIFM1	-6238,-377,-6238,-6238,-6238
chr2:45235285-45235513	chr2	+	45235432	45235544	True	NM_005413,NM_016932	chr2,chr2	+,-	SIX3,SIX2	-66446,1048
chr2:91764689-91765465	chr4	-	4241309	4241472	False	NM_032927,NM_145291	chr4,chr4	-,+	TMEM128,ZBTB49	8519,50451
chr2:91764689-91765465	chr2	+	91764688	91765398	True	NR_003503,NR_027238	chr2,chr2	+,-	GGT8P,LOC654342	197969,82635
chr5:156486406-156486961	chr5	+	156486820	156486888	True	NM_001099414,NM_012206,NM_001173393,NM_005546	chr5,chr5,chr5,chr5	-,-,-,+	HAVCR1,HAVCR1,HAVCR1,ITK	-1333,-1333,-850,121018
chr16:88934363-88934730	chr16	+	88934574	88934717	True	NM_001080487,NM_016209	chr16,chr16	-,+	PABPN1L,TRAPPC2L	-1506,-11119
chr20:10034486-10035426	chr20	+	10034485	10035443	True	NM_198798,NM_177990	chr20,chr20	+,-	ANKRD5,PAK7	-18839,-214798
chr7:65959053-65959254	chr7	+	65959138	65959198	True	NM_001167961,NR_002933	chr7,chr7	+,-	KCTD7,LOC493754	134669,84350
chr1:16007607-16008913	chr1	+	16007617	16008385	True	NM_024758,NM_015164	chr1,chr1	-,+	AGMAT,PLEKHM2	-96012,2441
chr1:45204490-45205138	chr1	+	45204813	45205187	True	NM_006845,NM_153274	chr1,chr1	+,-	KIF2C,BEST4	302,48289
chr11:62414184-62414424	chr11	+	62414183	62414437	True	NM_001043229,NM_030628,NM_198335,NM_198334	chr11,chr11,chr11,chr11	+,-,-,-	METTL12,INTS5,GANAB,GANAB	18341,6387,-79,-79
chr1:94921040-94921779	chr1	+	94921218	94921370	True	NM_002858,NM_001178096	chr1,chr1	+,-	ABCD3,F3	-37348,86093
chr3:47325354-47326467	chr3	+	47325389	47326243	True	NM_022342,NM_182902,NM_001134878,NM_025010	chr3,chr3,chr3,chr3	-,-,-,+	KIF9,KIF9,KIF9,KLHL18	-1052,-1052,-1052,-1110
chr15:86216634-86217007	chr15	+	86216700	86216835	True	NR_031682,NM_144767	chr15,chr15	-,+	MIR1276,AKAP13	97031,3432
chr10:97321715-97322669	chr10	+	97321714	97322718	True	NM_024991,NM_015385,NM_001098175	chr10,chr10,chr10	-,-,+	SORBS1,SORBS1,ENTPD1	-543,-543,148817
chr22:20616685-20616944	chr22	+	20616786	20616836	True	NM_015672,NM_003426	chr22,chr22	-,+	RIMBP3,ZNF74	-155000,131643
chr22:20616685-20616944	chr22	-	18760699	18760749	False	NM_017414,NR_003267	chr22,chr22	+,-	USP18,GGT3P	-127992,18775
chr22:20616685-20616944	chr22	-	20365732	20365782	False	NR_003563,NR_026919	chr22,chr22	-,+	PI4KAP1,LOC150197	32963,-171928
chr22:20616685-20616944	chr22	-	21561791	21561841	False	NR_024583,NR_002829	chr22,chr22	+,-	POM121L8P,P2RX6P	74872,-163253
chr7:140176649-140177242	chr7	+	140176949	140177017	True	NM_013446,NM_001008749,NM_001145125	chr7,chr7,chr7	-,+,-	MKRN1,RAB19,MKRN1	2406,-73162,2406
chr4:154125765-154126066	chr4	+	154125769	154126067	True	NR_001562,NM_015271	chr4,chr4	-,+	ANXA2P1,TRIM2	103946,-224
chr14:64195125-64196010	chr14	+	64195160	64195863	True	NM_030791,NM_015180	chr14,chr14	-,+	SGPP1,SYNE2	-404,123819
chr1:145209734-145209968	chr1	+	145209734	145209954	True	NM_203458,NM_022359	chr1,chr1	+,-	NOTCH2NL,PDE4DIP	-674,-133548
chr1:145209734-145209968	chr1	-	120611615	120611689	False	NM_001200001,NM_024408,NM_001100910	chr1,chr1,chr1	-,-,+	NOTCH2,NOTCH2,FAM72B	678,678,227315
chr17:57232645-57232910	chr17	+	57232703	57232883	True	NM_182620,NR_029842,NM_018304,NM_001100595	chr17,chr17,chr17,chr17	-,-,+,-	SKA2,MIR301A,PRR11,SKA2	-7,-4121,2,-7
chr17:29637792-29638005	chr17	+	29637791	29637866	True	NM_006495,NM_032932	chr17,chr17	-,+	EVI2B,RAB11FIP4	3321,80775
chr11:76492410-76493223	chr11	+	76492476	76493128	True	NM_015516,NR_024042	chr11,chr11	+,-	TSKU,GUCY2E	1156,-59643
chr11:65030173-65031697	chr11	+	65030279	65031531	True	NM_002689,NM_001077241	chr11,chr11	+,-	POLA2,SLC25A45	-909,118665
chr17:46032152-46032454	chr17	+	46032170	46032290	True	NM_018129,NM_024320	chr17,chr17	+,-	PNPO,PRR15L	-13332,2878
chr1:59041256-59041535	chr1	+	59041317	59041555	True	NM_002353,NR_034014	chr1,chr1	-,+	TACSTD2,LOC100131060	1661,209267
chr9:103949647-103951603	chr9	+	103949782	103951333	True	NM_001127610,NM_017753	chr9,chr9	-,+	BAAT,LPPR1	194530,-2518
chr15:30865350-30865624	chr15	+	30865358	30865548	True	NR_027470,NM_148911,NR_026858	chr15,chr15,chr15	+,-,+	FAM7A2,CHRFAM7A,FAM7A1	-651,-179494,-651
chr15:30865350-30865624	chr15	-	32726459	32726649	False	NR_027470,NR_026859,NR_026858,NM_199357	chr15,chr15,chr15,chr15	-,-,-,+	FAM7A2,FAM7A3,FAM7A1,ARHGAP11A	651,466,651,181041
chr15:30865350-30865624	chr15	-	30685125	30685315	False	NM_148911,NM_139320,NR_026858	chr15,chr15,chr15	-,-,+	CHRFAM7A,CHRFAM7A,FAM7A1	599,599,179442
chr15:30865350-30865624	chr15	+	30396350	30396540	False	NR_026859,NM_175610	chr15,chr15	+,-	FAM7A3,TJP1	-466,-281644
chr3:44697105-44698174	chr3	+	44697223	44697598	True	NM_003420,NM_020696	chr3,chr3	+,-	ZNF35,KIAA1143	-7048,105626
chr2:132124177-132124592	chr2	+	132124255	132124641	True	NM_001077637,NR_036499	chr2,chr2	-,+	LOC150786,LOC389043	-2524,35832
chr3:58518836-58520145	chr3	+	58518904	58520130	True	NM_003500,NM_153331	chr3,chr3	-,+	ACOX2,KCTD6	2849,-34863
chr22:31533094-31533876	chr22	+	31533130	31533588	True	NM_015715,NM_001002837	chr22,chr22	-,+	PLA2G3,INPP5J	2931,-14220
chr1:31887078-31887952	chr1	+	31887227	31887924	True	NM_001199039,NM_001199038,NM_018565,NM_001199037,NM_178865,NM_004102	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-	SERINC2,SERINC2,SERINC2,SERINC2,SERINC2,FABP3	-618,-4866,-618,-4257,-1315,-41304
chr22:25351045-25351913	chr22	+	25351106	25351496	True	NM_001145206,NM_001001663	chr22,chr22	+,-	KIAA1671,TMEM211	72444,-15792
chr6:26500515-26501034	chr6	+	26500530	26500809	True	NM_001732,NM_024639	chr6,chr6	+,-	BTN1A1,ZNF322A	685,159211
chr10:102823068-102823421	chr10	+	102823068	102823414	True	NM_024895,NM_030929	chr10,chr10	-,+	PDZD7,KAZALD1	-32154,-2120
chr7:108209485-108209950	chr7	+	108209555	108209972	True	NM_001130475,NM_182529,NM_012328	chr7,chr7,chr7	-,-,+	THAP5,THAP5,DNAJB9	246,-24,216
chr3:140477963-140478830	chr3	+	140478040	140478578	True	NM_178177,NM_152616	chr3,chr3	-,+	NMNAT3,TRIM42	-1081155,-81225
chr18:61086161-61087400	chr18	+	61086163	61087390	True	NM_004869,NM_002639	chr18,chr18	-,+	VPS4B,SERPINB5	2412,56753
chr6:149660221-149661018	chr6	+	149660606	149661073	True	NM_207360,NM_015093	chr6,chr6	-,+	ZC3H12D,TAB2	145133,-21231
chr12:51348363-51348794	chr12	+	51348562	51348762	True	NM_001109619,NM_001174130	chr12,chr12	+,-	HIGD1C,SLC11A2	-832,54341
chr15:40644028-40645273	chr15	+	40644512	40645222	True	NM_207380,NM_001145643,NM_033510	chr15,chr15,chr15	-,+,+	C15orf52,PHGR1,DISP2	-11344,-1330,5211
chr22:24979950-24980755	chr22	+	24979984	24980512	True	NM_207644,NM_013430	chr22,chr22	-,+	C22orf36,GGT1	8573,-330
chrX:138724656-138725875	chrX	+	138724702	138725829	True	NM_001171879,NM_001171878,NM_005369,NM_000133,NM_001171877	chrX,chrX,chrX,chrX,chrX	-,-,-,+,-	MCF2,MCF2,MCF2,F9,MCF2	68,68,68,-111865,68
chr5:173317636-173317858	chr5	+	173317664	173317878	True	NM_030627,NM_138369	chr5,chr5	+,-	CPEB4,BOD1	-2384,-273998
chr7:56135885-56136486	chr7	+	56136161	56136315	True	NM_001130069,NM_004577,NM_001042469,NM_001146333,NM_015411,NR_002957,NM_001042470	chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,-,+,+,+,+,+	SUMF2,PSPH,SUMF2,SUMF2,SUMF2,SNORA15,SUMF2	-4295,-16893,-4295,-4295,-4295,-8049,-4295
chr22:40768289-40770043	chr22	+	40768477	40769538	True	NM_020831,NM_015705	chr22,chr22	-,+	MKL1,SGSM3	263209,-1943
chr1:63789023-63789344	chr1	+	63789122	63789254	True	NM_012183,NM_014288	chr1,chr1	+,-	FOXD3,ITGB3BP	-443,199631
chrX:44733467-44734659	chrX	+	44733507	44734375	True	NM_176819,NM_021140	chrX,chrX	-,+	CXorf36,KDM6A	325822,-1135
chr19:38805807-38806149	chr19	+	38805989	38806149	True	NM_001039673,NM_001145461,NM_001039671,NM_001039672,NM_001145462,NM_033557,NM_001145463,NM_004823	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,+	YIF1B,YIF1B,YIF1B,YIF1B,YIF1B,YIF1B,YIF1B,KCNK6	507,346,346,507,346,-5480,507,4334
chr18:14962847-14963445	chr18	+	14962981	14963443	True	NR_027417,NR_036153	chr18,chr18	-,+	LOC644669,MIR3156-2	362525,-132867
chr19:36232240-36232732	chr19	+	36232272	36232435	True	NM_024660,NM_144987,NM_172341,NM_001040425,NM_019104	chr19,chr19,chr19,chr19,chr19	-,-,+,-,+	IGFLR1,U2AF1L4,PSENEN,U2AF1L4,LIN37	973,3958,4058,3958,7076
chr15:21287031-21288037	chr15	+	21287210	21287419	True	NR_027411,NR_028506	chr15,chr15	+,-	GOLGA8C,NF1P1	-519595,-152585
chr15:21287031-21288037	chr15	+	20280021	20280230	False	NR_036432,NR_027411	chr15,chr15	-,+	HERC2P3,GOLGA8C	431254,487443
chr16:31149495-31150139	chr16	+	31149557	31150119	True	NM_002773,NM_182958	chr16,chr16	-,+	PRSS8,MYST1	-2406,-20623
chr7:26904472-26904715	chr7	+	26904482	26904712	True	NM_003930,NM_001145531	chr7,chr7	-,+	SKAP2,C7orf71	-141,-227043
chr6:1608422-1608633	chr6	+	1608462	1608615	True	NM_001453,NR_027116	chr6,chr6	+,-	FOXC1,LOC285768	2065,-506895
chr17:76247963-76248405	chr17	+	76248093	76248345	True	NR_002219,NM_001204210	chr17,chr17	-,+	EPR1,TMEM235	-27310,-20753
chr8:121819755-121820445	chr8	+	121819764	121820091	True	NM_021021,NM_022045	chr8,chr8	-,+	SNTB1,MTBP	4275,-362157
chr17:73782860-73784351	chr17	+	73782986	73783965	True	NM_005324,NM_001080419	chr17,chr17	-,+	H3F3B,UNK	-7126,-2356
chr17:34060617-34062149	chr17	+	34060803	34061890	True	NM_033315,NM_139285	chr17,chr17	+,-	RASL10B,GAS2L2	-2175,18064
chrX:112082117-112083736	chrX	+	112082413	112083601	True	NM_133265,NM_001004308	chrX,chrX	-,+	AMOT,ZCCHC16	492,-756211
chr22:24310001-24310619	chr22	+	24310055	24310467	True	NM_000854,NM_001080843,NM_001084393,NM_001084392	chr22,chr22,chr22,chr22	-,-,+,-	GSTT2,GSTT2B,DDTL,DDT	-6662,-6687,-1080,6263
chr22:24310001-24310619	chr22	-	24315238	24315650	False	NM_001355,NM_001084393,NM_001084392,NM_000854	chr22,chr22,chr22,chr22	-,+,-,+	DDT,DDTL,DDT,GSTT2	6419,-6263,1080,6663
chrX:84500477-84502022	chrX	+	84500549	84502023	True	NM_021998,NM_024921	chrX,chrX	+,-	ZNF711,POF1B	-1610,132776
chr16:69387765-69388204	chr16	+	69388094	69388234	True	NM_016101,NM_144676	chr16,chr16	+,-	NIP7,TMED6	-14738,-2382
chr19:17798255-17798544	chr19	+	17798417	17798585	True	NM_001080421,NM_018174	chr19,chr19	-,+	UNC13A,MAP1S	473,31717
chr16:29786697-29788461	chr16	+	29787086	29788222	True	NM_175900,NM_152338	chr16,chr16	-,+	C16orf54,ZG16	-29746,1338
chr1:91870336-91870702	chr1	+	91870349	91870739	True	NM_001134419,NM_001017975	chr1,chr1	+,-	CDC7,HFM1	95664,77
chr5:140620520-140620962	chr5	+	140620561	140620827	True	NM_018935,NR_001282,NR_001281,NM_031947	chr5,chr5,chr5,chr5	+,+,+,-	PCDHB15,PCDHB19P,PCDHB18,SLC25A2	4319,-923,-6674,62835
chr16:81822044-81822440	chr16	+	81822171	81822333	True	NM_002661,NM_145168	chr16,chr16	+,-	PLCG2,SDR42E1	-9292,222824
chr3:50315119-50316907	chr3	+	50315588	50316724	True	NM_006764,NM_153215	chr3,chr3	-,+	IFRD2,C3orf45	13352,-207
chr6:133563872-133564180	chr6	+	133563891	133564229	True	NM_172105,NM_052831,NM_004100,NM_172103	chr6,chr6,chr6,chr6	+,-,+,+	EYA4,C6orf192,EYA4,EYA4	-1447,-444144,-1447,-1447
chr8:131414254-131414612	chr8	+	131414260	131414650	True	NM_015137,NM_018482	chr8,chr8	+,-	EFR3A,ASAP1	1501705,-43
chr13:114054340-114054551	chr13	+	114054354	114054427	True	NM_024719,NM_017905	chr13,chr13	-,+	GRTP1,TMCO3	-35891,90880
chr6:87868367-87869379	chr6	+	87868421	87869084	True	NM_000735,NM_015021	chr6,chr6	-,+	CGA,ZNF292	-63597,-3214
chr16:449005-449205	chr16	+	449005	449157	True	NM_005009,NM_021259,NM_020664	chr16,chr16,chr16	+,-,+	NME4,TMEM8A,DECR2	-1864,-17055,2700
chr9:139921532-139921811	chr9	+	139921581	139921781	True	NM_004479,NM_001606,NM_212533,NM_207511	chr9,chr9,chr9,chr9	-,-,-,+	FUT7,ABCA2,ABCA2,C9orf139	5561,1009,1643,134
chr3:182817412-182818646	chr3	+	182817612	182818297	True	NM_020166,NM_032047	chr3,chr3	-,+	MCCC1,B3GNT5	-247,152734
chrX:15753701-15753975	chrX	+	15753783	15753942	True	NR_002725,NM_007220	chrX,chrX	-,+	INE2,CA5B	51829,2469
chr7:129844272-129845033	chr7	+	129844648	129844958	True	NM_145268,NM_032842	chr7,chr7	+,-	C7orf45,TMEM209	2745,430
chr19:45417464-45417791	chr19	+	45417494	45417692	True	NM_145288,NM_001645,NM_000041	chr19,chr19,chr19	-,+,+	ZNF296,APOC1,APOE	162046,228,-8506
chr19:51487846-51488975	chr19	+	51487930	51488493	True	NM_005046,NM_005551,NM_139277	chr19,chr19,chr19	-,+,-	KLK7,KLK2,KLK7	-780,-111292,-859
chr22:38848949-38850657	chr22	+	38849156	38850596	True	NM_016657,NM_152868,NM_004981	chr22,chr22,chr22	+,-,-	KDELR3,KCNJ4,KCNJ4	13486,657,-9123
chr21:39292762-39294226	chr21	+	39292979	39294215	True	NM_002240,NR_026838	chr21,chr21	-,+	KCNJ6,DSCR8	-4283,199329
chr8:22457901-22458254	chr8	+	22458064	22458230	True	NM_001013842,NM_173686,NR_027715,NM_021174,NR_033902,NM_001198827	chr8,chr8,chr8,chr8,chr8,chr8	+,+,-,+,+,+	C8orf58,C8orf58,FLJ14107,KIAA1967,KIAA1967,C8orf58	-1001,-1001,41542,4308,3914,-1001
chr7:74305687-74306080	chr7	+	74305829	74305902	True	NR_027777,NR_027776,NM_001025202,NR_027775	chr7,chr7,chr7,chr7	+,+,-,+	PMS2P5,PMS2P5,STAG3L2,PMS2P5	991,991,892,991
chr7:74305687-74306080	chr7	+	72475536	72475609	False	NM_001013739,NR_003614	chr7,chr7	-,+	STAG3L3,PMS2L2	909,1070
chr7:74305687-74306080	chr7	-	74989284	74989357	False	NR_003614,NM_001002840,NM_018991	chr7,chr7,chr7	-,+,+	PMS2L2,STAG3L1,STAG3L1	-1069,-901,-901
chr10:104536033-104536827	chr10	+	104536094	104536863	True	NM_000102,NM_017787	chr10,chr10	-,+	CYP17A1,C10orf26	60477,-258
chr1:248020112-248020397	chr1	+	248020235	248020431	True	NM_015431,NM_001001959	chr1,chr1	+,-	TRIM58,OR11L1	69,-15037
chr16:30548939-30549308	chr16	+	30549237	30549353	True	NM_023931,NM_002209	chr16,chr16	-,+	ZNF747,ITGAL	-3043,-65305
chr7:8304007-8305249	chr7	+	8304211	8305129	True	NM_004968,NM_152745,NM_022307,NM_001136020	chr7,chr7,chr7,chr7	-,+,-,-	ICA1,NXPH1,ICA1,ICA1	-2026,168455,-2529,-2431
chrX:153525496-153525729	chrX	+	153525495	153525586	True	NM_001205201,NM_001145934,NM_001145933,NM_012253,NM_001586	chrX,chrX,chrX,chrX,chrX	-,+,+,+,-	TEX28,TKTL1,TKTL1,TKTL1,TEX28	-1931,7822,-1526,-1526,-2041
chr16:29872572-29873145	chr16	+	29872632	29873040	True	NM_006319,NR_024370,NR_015396	chr16,chr16,chr16	-,+,+	CDIPT,LOC440356,LOC440356	1588,1963,2114
chr17:18325971-18326520	chr17	+	18326038	18326138	True	NM_148918,NR_001443	chr17,chr17	-,+	SHMT1,LOC339240	-59182,-594
chr17:73758833-73760714	chr17	+	73759094	73760694	True	NM_000154,NM_001080419	chr17,chr17	-,+	GALK1,UNK	636,19986
chr8:124556180-124557175	chr8	+	124556482	124556955	True	NM_018024,NM_058229	chr8,chr8	+,-	WDYHV1,FBXO32	-127572,-3036
chr7:99103066-99103858	chr7	+	99103105	99103835	True	NM_014569,NM_145102,NM_032164	chr7,chr7,chr7	+,+,-	ZKSCAN5,ZKSCAN5,ZNF394	-583,-883,-5228
chr14:24744209-24744969	chr14	+	24744408	24744988	True	NM_004581,NM_182836,NM_174913	chr14,chr14,chr14	-,-,+	RABGGTA,RABGGTA,C14orf21	-3665,-3605,24109
chr6:18263172-18263612	chr6	+	18263206	18263651	True	NM_001134709,NM_153042,NM_003472	chr6,chr6,chr6	-,+,-	DEK,KDM1B,DEK	1198,-107647,1198
chr20:36927619-36928415	chr20	+	36927650	36928432	True	NM_001725,NM_001029864	chr20,chr20	+,-	BPI,KIAA1755	4119,-38476
chr8:146055688-146056164	chr8	+	146055719	146056090	True	NM_001081004,NM_003416	chr8,chr8	-,+	COMMD5,ZNF7	22419,-2867
chr13:30170213-30170449	chr13	+	30170224	30170469	True	NM_015233,NM_003045	chr13,chr13	+,-	MTUS2,SLC7A1	-167498,-399
chr18:14475048-14475302	chr18	+	14475099	14475342	True	NR_024076,NR_026756	chr18,chr18	-,+	CXADRP3,LOC284233	23413,-137728
chr18:14475048-14475302	chr21	-	15052605	15052799	False	NR_026755,NM_174981	chr21,chr21	-,+	C21orf15,POTED	167936,-70158
chr10:101844154-101845245	chr10	+	101844706	101845236	True	NR_024130,NM_001308	chr10,chr10	+,-	DNMBP-AS1,CPN1	-157791,-3064
chr17:17205258-17205906	chr17	+	17205659	17205841	True	NM_003653,NM_020201	chr17,chr17	-,+	COPS3,NT5M	-21042,838
chr12:72079405-72079794	chr12	+	72079543	72079797	True	NM_018279,NM_144982	chr12,chr12	+,-	TMEM19,ZFC3H1	80,-21794
chr8:20036919-20038093	chr8	+	20036953	20038053	True	NM_003053,NM_001135691,NM_001693,NM_001142325,NM_001142324	chr8,chr8,chr8,chr8,chr8	-,-,+,-,-	SLC18A1,SLC18A1,ATP6V1B2,SLC18A1,SLC18A1	2714,2714,16650,2714,2714
chr12:69740652-69741257	chr12	+	69740923	69741269	True	NM_000239,NR_031692	chr12,chr12	+,-	LYZ,MIR1279	864,-73925
chr1:52832026-52832318	chr1	+	52832270	52832366	True	NM_032864,NM_032449	chr1,chr1	+,-	PRPF38A,CC2D1B	37852,-393
chr15:30113495-30113760	chr15	+	30113510	30113751	True	NM_003257,NR_026859,NM_175610	chr15,chr15,chr15	-,+,-	TJP1,FAM7A3,TJP1	1005,282183,1005
chr1:16846936-16847232	chr1	+	16846965	16847225	True	NR_023386,NR_037446	chr1,chr1	-,+	CROCCP3,MIR3675	-27769,28183
chr5:139779119-139780375	chr5	+	139779156	139780359	True	NM_024668,NM_017747,NM_020690,NM_017978,NM_001945,NM_001197030	chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,-,+	ANKHD1,ANKHD1,ANKHD1-EIF4EBP3,ANKHD1,HBEGF,ANKHD1	1039,1039,1039,1039,-52968,1039
chr1:35321419-35322264	chr1	+	35321518	35322268	True	NM_001164824,NM_001164825,NM_138428,NM_002060	chr1,chr1,chr1,chr1	-,-,-,+	C1orf212,C1orf212,C1orf212,GJA4	2428,3120,3199,-62970
chr6:26087969-26088776	chr6	+	26088023	26088764	True	NM_139008,NM_139009,NM_005323,NM_000410,NM_139003,NM_139004,NM_139006,NM_139007,NM_139011,NM_139010	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	+,+,-,+,+,+,+,+,+,+	HFE,HFE,HIST1H1T,HFE,HFE,HFE,HFE,HFE,HFE,HFE	-565,-565,19653,-565,-565,-565,-565,-565,-565,-565
chr14:103774015-103775663	chr14	+	103774034	103775598	True	NR_033938,NM_001969	chr14,chr14	-,+	LOC100131366,EIF5	-118669,24894
chr1:201252569-201252800	chr1	+	201252595	201252751	True	NM_000364,NM_000299,NM_001005337	chr1,chr1,chr1	-,+,+	TNNT2,PKP1,PKP1	94104,-66,-66
chr7:1202880-1203262	chr7	+	1202885	1203125	True	NM_182491,NM_001080461	chr7,chr7	-,+	ZFAND2A,UNCX	-3030,69528
chr9:111697051-111697966	chr9	+	111697058	111697986	True	NM_003640,NM_017832	chr9,chr9	-,+	IKBKAP,C9orf6	-450,-436
chr3:112708276-112709723	chr3	+	112708276	112709653	True	NM_138940,NM_138485,NM_014170	chr3,chr3,chr3	-,+,+	CD200R1,GTPBP8,GTPBP8	-14339,146,146
chr5:31803638-31805016	chr5	+	31803745	31804829	True	NR_036241,NM_178140	chr5,chr5	-,+	MIR4279,PDZD2	131486,-4766
chr6:170861821-170862073	chr6	+	170861824	170862044	True	NM_001172085,NM_002793	chr6,chr6	+,-	TBP,PSMB1	1376,423
chr3:50388352-50388554	chr3	+	50388353	50388593	True	NM_015896,NM_007022,NM_007024,NM_006545,NM_007182,NM_170714	chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-	ZMYND10,CYB561D2,TMEM115,NPRL2,RASSF1,RASSF1	-5197,-107,8396,9,-9986,-9986
chr8:144791648-144793300	chr8	+	144791676	144793001	True	NM_001162914,NM_139021	chr8,chr8	-,+	LOC100130274,MAPK15	-1397,5505
chr1:211432974-211433199	chr1	+	211432992	211433084	True	NM_001136225,NM_001136224,NM_172362,NM_001136223,NM_018254	chr1,chr1,chr1,chr1,chr1	+,+,-,+,+	RCOR3,RCOR3,KCNH1,RCOR3,RCOR3	-335,-335,-125535,-335,204
chr1:85462230-85462512	chr1	+	85462321	85462519	True	NM_145172,NM_153259	chr1,chr1	+,-	WDR63,MCOLN2	65473,327
chr21:35444104-35444327	chr21	+	35444125	35444325	True	NM_032476,NM_006933,NM_001697	chr21,chr21,chr21	+,+,-	MRPS6,SLC5A3,ATP5O	1497,1544,-155967
chr1:6556700-6556961	chr1	+	6556720	6556814	True	NM_001042664,NM_020631,NM_138697,NM_001042663	chr1,chr1,chr1,chr1	-,-,+,-	PLEKHG5,PLEKHG5,TAS1R1,PLEKHG5	-6080,-4960,58523,720
chr19:4725639-4726359	chr19	+	4725860	4726024	True	NR_027148,NM_139159	chr19,chr19	+,-	C19orf30,DPP9	43092,-2005
chr2:31364466-31365843	chr2	+	31364519	31365699	True	NM_014600,NM_024572	chr2,chr2	+,-	EHD3,GALNT14	91180,-2948
chr19:40227337-40227987	chr19	+	40227427	40227961	True	NM_203471,NM_001828	chr19,chr19	+,-	LGALS14,CLC	-32533,757
chr11:68081605-68082159	chr11	+	68081778	68082020	True	NM_022338,NM_002335	chr11,chr11	-,+	C11orf24,LRP5	-42309,-1730
chr16:66949653-66949980	chr16	+	66949843	66949969	True	NM_003869,NM_001204746,NM_001204744,NM_001204745,NM_001128850,NM_004165,NM_004062	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,-,-,-,-	CES2,CDH16,CDH16,CDH16,RRAD,RRAD,CDH16	18377,2968,2968,2968,9520,9520,2968
chr19:18633018-18633367	chr19	+	18633212	18633343	True	NM_001171948,NM_006532	chr19,chr19	+,-	C19orf50,ELL	35228,-275
chr19:51645101-51645691	chr19	+	51645270	51645738	True	NM_014385,NM_145232,NM_016543	chr19,chr19,chr19	+,-,+	SIGLEC7,CTU1,SIGLEC7	23,-33623,23
chr5:152870612-152871580	chr5	+	152870623	152871595	True	NM_000827,NM_018691,NM_001114183	chr5,chr5,chr5	+,-,+	GRIA1,FAM114A2,GRIA1	-590,546952,-590
chr19:57332878-57334184	chr19	+	57332951	57334107	True	NM_001146186,NR_023847	chr19,chr19	-,+	PEG3,PEG3-AS1	2317,-9155
chr16:85611820-85612443	chr16	+	85611882	85612318	True	NM_001134473,NM_016095	chr16,chr16	+,-	KIAA0182,GINS2	32710,110320
chr6:88101745-88102480	chr6	+	88101758	88102467	True	NR_026784,NM_198568	chr6,chr6	+,-	C6orf164,GJB7	4374,-62762
chrX:151135725-151136327	chrX	+	151135729	151136347	True	NR_029973,NM_004961,NM_001011550	chrX,chrX,chrX	-,-,+	MIR452,GABRE,MAGEA4	-7545,6854,-49020
chr19:15193166-15193743	chr19	+	15193309	15193564	True	NM_001004713,NM_006844	chr19,chr19	+,-	OR1I1,ILVBL	4312,43064
chr3:27674751-27675244	chr3	+	27674807	27675080	True	NM_005442,NM_182523	chr3,chr3	-,+	EOMES,CMC1	88756,608043
chr5:72676478-72676743	chr5	+	72676630	72676793	True	NM_004472,NM_001037637	chr5,chr5	-,+	FOXD1,BTF3	67610,117456
chr3:50126264-50126538	chr3	+	50126278	50126578	True	NR_036627,NM_032355,NM_005778	chr3,chr3,chr3	+,-,+	RBM5,MON1A,RBM5	23,-158833,23
chr2:242642044-242642271	chr2	+	242642076	242642220	True	NR_033255,NM_032329	chr2,chr2	-,+	DTYMK,ING5	-15693,-671
chr7:87104559-87104827	chr7	+	87104613	87104801	True	NM_000443,NM_021151,NM_018850,NM_018849	chr7,chr7,chr7,chr7	-,+,-,-	ABCB4,CROT,ABCB4,ABCB4	268,-129715,268,268
chr1:92791682-92792109	chr1	+	92791682	92792096	True	NM_053274,NM_024813	chr1,chr1	-,+	GLMN,RPAP2	-27116,-27212
chr2:176948927-176949330	chr2	+	176949103	176949364	True	NM_001080458,NM_000523	chr2,chr2	-,+	EVX2,HOXD13	-413,8167
chr11:66486366-66487378	chr11	+	66486685	66487391	True	NM_024650,NM_006946	chr11,chr11	+,-	C11orf80,SPTBN2	24815,1529
chr4:84205637-84205850	chr4	+	84205648	84205708	True	NM_015697,NM_016067	chr4,chr4	-,+	COQ2,MRPS18C	409,171409
chr7:42950133-42950638	chr7	+	42950146	42950660	True	NM_024054,NM_001099858,NM_031903	chr7,chr7,chr7	-,-,+	C7orf25,C7orf25,MRPL32	1079,1079,21278
chr17:4690630-4690922	chr17	+	4690688	4690819	True	NM_002798,NM_001014985,NM_001144939,NM_001144941,NM_001144940,NM_182566	chr17,chr17,chr17,chr17,chr17,chr17	+,+,-,-,-,-	PSMB6,GLTPD2,VMO1,VMO1,VMO1,VMO1	8637,1434,-959,-959,-959,-959
chrX:62974941-62975212	chrX	+	62975025	62975131	True	NM_015185,NM_001010888,NM_001173480	chrX,chrX,chrX	-,+,-	ARHGEF9,ZC3H12B,ARHGEF9	6,1733483,6
chr19:46104816-46105330	chr19	+	46104845	46105209	True	NM_005282,NM_000164	chr19,chr19	-,+	GPR4,GIPR	307,66292
chr1:1287052-1287317	chr1	+	1287203	1287331	True	NM_152228,NM_004421,NM_032348	chr1,chr1,chr1	+,-,-	TAS1R3,DVL1,MXRA8	-20528,-2711,6634
chr21:42789795-42790342	chr21	+	42789890	42790392	True	NM_002462,NM_001135099,NM_001178046,NM_001144925	chr21,chr21,chr21,chr21	+,-,+,+	MX1,TMPRSS2,MX1,MX1	7585,89652,7710,2127
chr7:50514469-50514902	chr7	+	50514471	50514940	True	NM_001042762,NM_022116,NR_033845	chr7,chr7,chr7	-,-,+	FIGNL1,FIGNL1,LOC100129427	3199,3199,84516
chr2:73115564-73115910	chr2	+	73115568	73115866	True	NM_003124,NM_015189	chr2,chr2	+,-	SPR,EXOC6B	-1107,-62391
chr16:19464833-19465754	chr16	+	19465117	19465765	True	NM_024780,NM_016641	chr16,chr16	+,-	TMC5,GDE1	2006,67735
chr3:150174268-150175697	chr3	+	150174268	150175304	True	NM_014445,NM_014779	chr3,chr3	-,+	SERP1,TSC22D2	89174,-47534
chr22:24180278-24180684	chr22	+	24180333	24180661	True	NM_198440,NM_001002862,NM_001024938,NM_001135751	chr22,chr22,chr22,chr22	-,-,+,-	DERL3,DERL3,SLC2A11,DERL3	588,588,18397,588
chr19:17862686-17864433	chr19	+	17862769	17864475	True	NM_001161359,NM_001161358,NM_001080421,NM_015122,NM_001161357	chr19,chr19,chr19,chr19,chr19	+,+,-,+,+	FCHO1,FCHO1,UNC13A,FCHO1,FCHO1	-534,-4293,-63761,-534,-4293
chr3:136531762-136533360	chr3	+	136532193	136533076	True	NM_001097599,NM_005862,NM_001097600,NM_025246	chr3,chr3,chr3,chr3	+,-,+,+	TMEM22,STAG1,TMEM22,TMEM22	4784,-60948,4784,4784
chr17:76130026-76130466	chr17	+	76130048	76130398	True	NM_007267,NM_001127198,NM_152468	chr17,chr17,chr17	-,-,+	TMC6,TMC6,TMC8	-1560,-5187,-3240
chr14:61446224-61447749	chr14	+	61446228	61447566	True	NM_001172702,NM_020810,NM_153811,NR_033344	chr14,chr14,chr14,chr14	+,-,+,+	SLC38A6,TRMT5,SLC38A6,SLC38A6	265,267,265,398
chr2:71559593-71560731	chr2	+	71559641	71560737	True	NM_020459,NM_001014972,NM_014497	chr2,chr2,chr2	-,+,+	PAIP2B,ZNF638,ZNF638	-105408,-811,-811
chr1:182026559-182026793	chr1	+	182026579	182026769	True	NR_034131,NM_001009992	chr1,chr1	+,-	NCRNA00272,ZNF648	349986,4128
chr11:44879871-44880961	chr11	+	44879930	44880974	True	NM_130783,NM_001076787	chr11,chr11	+,-	TSPAN18,TP53I11	-94005,91684
chr14:35872873-35873092	chr14	+	35872876	35873008	True	NM_002791,NM_020529	chr14,chr14	+,-	PSMA6,NFKBIA	-111353,1002
chr19:46011116-46011409	chr19	+	46011121	46011339	True	NM_003370,NM_206900,NM_001080401	chr19,chr19,chr19	+,-,+	VASP,RTN2,PPM1N	-484,-10808,-9441
chr3:48594537-48594836	chr3	+	48594536	48594752	True	NM_033629,NM_004567,NM_033199	chr3,chr3,chr3	+,-,-	TREX1,PFKFB4,UCN2	-87358,-309,6499
chr9:36167067-36167316	chr9	+	36167116	36167224	True	NM_001190383,NM_005893	chr9,chr9	-,+	GNE,CCIN	91322,2164
chr7:22767053-22767284	chr7	+	22767168	22767248	True	NM_000600,NM_019059	chr7,chr7	+,-	IL6,TOMM7	-454,95223
chr3:52030342-52031643	chr3	+	52030883	52031527	True	NM_000992,NM_001198898	chr3,chr3	-,+	RPL29,ACY1	-925,-13634
chr12:56321963-56322248	chr12	+	56321985	56322165	True	NM_001345,NM_032345,NM_001143853,NM_201554,NM_201444,NM_201445	chr12,chr12,chr12,chr12,chr12,chr12	+,-,-,+,+,+	DGKA,WIBG,WIBG,DGKA,DGKA,DGKA	2780,-288,-1076,3646,3646,3646
chr10:45868801-45869208	chr10	+	45868868	45869218	True	NM_001004297,NM_000698	chr10,chr10	-,+	OR13A1,ALOX5	-57812,410
chr19:49401549-49401754	chr19	+	49401573	49401791	True	NM_003323,NM_006184	chr19,chr19	-,+	TULP2,NUCB1	255,1515
chr2:176986293-176986497	chr2	+	176986295	176986487	True	NM_002148,NM_019558,NM_014213,NM_001080458,NM_001199747,NM_001199746	chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,-,+,+	HOXD10,HOXD8,HOXD9,EVX2,HOXD8,HOXD8	-4854,7980,925,-37605,7934,7980
chr20:62480399-62480762	chr20	+	62480495	62480715	True	NM_080622,NM_025224	chr20,chr20	+,-	ABHD16B,ZBTB46	11850,-43639
chr15:44119386-44119833	chr15	+	44119410	44119678	True	NM_005926,NM_001167941,NM_024908	chr15,chr15,chr15	-,+,+	MFAP1,WDR76,WDR76	-2459,-351,-351
chr16:30387964-30388253	chr16	+	30387968	30388118	True	NM_013292,NM_052838,NM_015527	chr16,chr16,chr16	+,-,-	MYLPF,SEPT1,TBC1D10B	-1896,6103,-6446
chr15:84749282-84749596	chr15	+	84749338	84749624	True	NR_027001,NR_036652	chr15,chr15	-,+	LOC388152,LOC648809	149346,-450
chr15:84749282-84749596	chr15	-	82554404	82554608	False	NM_024580,NM_001008226,NM_001040610	chr15,chr15,chr15	-,+,-	EFTUD1,FAM154B,EFTUD1	546,543,546
chr4:49293037-49294392	chr4	+	49293221	49294193	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-305007,-384406
chr4:49293037-49294392	chr4	+	49299609	49300348	False	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-311395,-390794
chr4:49293037-49294392	chr4	+	49305745	49306484	False	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-317531,-396930
chr6:100017065-100017588	chr6	+	100017554	100017614	True	NM_005190,NM_021620,NM_001013399	chr6,chr6,chr6	-,+,-	CCNC,PRDM13,CCNC	-864,37035,-864
chr1:102440269-102442162	chr1	+	102440577	102442171	True	NR_033424,NM_058170	chr1,chr1	+,-	DNAJA1P5,OLFM3	-103068,20677
chr11:9290780-9291567	chr11	+	9291072	9291588	True	NM_006391,NM_015213	chr11,chr11	+,-	IPO7,DENND5A	114580,-4201
chr17:40828581-40828786	chr17	+	40828671	40828735	True	NM_016602,NM_024927,NM_003632	chr17,chr17,chr17	-,-,+	CCR10,PLEKHH3,CNTNAP1	5160,363,5896
chr1:16068581-16068833	chr1	+	16068715	16068781	True	NM_001089591,NM_001013641,NM_207348	chr1,chr1,chr1	-,+,+	UQCRHL,TMEM82,SLC25A34	65463,135,-5957
chrX:128657258-128657621	chrX	+	128657259	128657369	True	NM_003069,NM_000276,NM_139035	chrX,chrX,chrX	-,+,-	SMARCA1,OCRL,SMARCA1	141,16882,141
chr6:83883614-83885391	chr6	+	83883816	83884949	True	NM_001199918,NM_033411	chr6,chr6	-,+	PGM3,RWDD2A	18122,18082
chr4:76900767-76901125	chr4	+	76900917	76900989	True	NM_018115,NM_001130017	chr4,chr4	-,+	SDAD1,ART3	11182,31347
chr1:53704035-53704271	chr1	+	53704034	53704298	True	NM_000098,NM_002370	chr1,chr1	+,-	CPT2,MAGOH	-41984,34
chr15:55881742-55882093	chr15	+	55881742	55882086	True	NM_001198784,NM_015617	chr15,chr15	+,-	FLJ27352,PYGO1	-181073,-692
chr19:52081007-52081371	chr19	+	52081219	52081339	True	NM_007147,NR_034159	chr19,chr19	+,-	ZNF175,FLJ30403	-6744,16344
chr2:192110329-192110753	chr2	+	192110525	192110781	True	NM_001130158,NM_012223,NM_003151,NM_001161819	chr2,chr2,chr2,chr2	+,+,-,+	MYO1B,MYO1B,STAT4,MYO1B	-469,-469,-94600,-322
chr3:123303047-123303394	chr3	+	123303066	123303300	True	NM_198402,NM_012430	chr3,chr3	-,+	PTPLB,SEC22A	675,-382343
chr1:110448385-110449281	chr1	+	110448412	110449265	True	NM_172210,NM_000757,NM_172212,NM_139053,NM_172211	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	CSF1,CSF1,CSF1,EPS8L3,CSF1	3967,3967,3967,-141768,3967
chr12:27929517-27930305	chr12	+	27929714	27930345	True	NM_001146221,NM_020782	chr12,chr12	-,+	LOC100287284,KLHDC5	-5505,2841
chr11:1621747-1623169	chr11	+	1621971	1623067	True	NM_001012708,NM_001001480,NR_021489,NM_001004325	chr11,chr11,chr11,chr11	-,+,+,-	KRTAP5-3,KRTAP5-5,LOC338651,KRTAP5-2	6676,27965,-28051,-2447
chr10:4878977-4879672	chr10	+	4879040	4879613	True	NM_001040177,NR_026743	chr10,chr10	+,-	AKR1E2,tAKR	-10689,78903
chr17:29249466-29249757	chr17	+	29249499	29249757	True	NM_024683,NM_018404	chr17,chr17	-,+	C17orf42,ADAP2	-16213,-796
chr9:69201558-69201774	chr9	+	69201575	69201697	True	NM_001085476,NM_001098805	chr9,chr9	-,+	FOXD4L6,ANKRD20A4	557,180283
chr9:69201558-69201774	chr9	-	70917854	70917904	False	NR_015423,NM_199135	chr9,chr9	-,+	LOC572558,FOXD4L3	54903,-122
chr2:54786594-54787413	chr2	+	54786603	54787407	True	NM_178313,NM_001003937	chr2,chr2	+,-	SPTBN1,TSPYL6	-1129,-303194
chr6:170194559-170195081	chr6	+	170194785	170194977	True	NR_026781,NR_026780	chr6,chr6	-,+	NCRNA00242,C6orf208	3994,-4667
chr19:3586930-3587370	chr19	+	3587107	3587245	True	NM_001060,NM_133261	chr19,chr19	-,+	TBXA2R,GIPC3	19636,-1590
chr3:100118735-100119485	chr3	+	100118840	100119392	True	NM_014820,NM_001085451	chr3,chr3	-,+	TOMM70A,LNP1	883,644
chr16:58662295-58662933	chr16	+	58662514	58662856	True	NM_016284,NM_206999,NM_024860	chr16,chr16,chr16	-,-,+	CNOT1,CNOT1,SETD6	944,944,-113182
chr15:74723025-74723289	chr15	+	74723046	74723284	True	NM_001146029,NM_006465,NM_001146030,NM_003612	chr15,chr15,chr15,chr15	-,+,-,-	SEMA7A,ARID3B,SEMA7A,SEMA7A	3065,110263,2767,3065
chr22:20860713-20861613	chr22	+	20860853	20861607	True	NM_001003891,NR_033825,NM_015889	chr22,chr22,chr22	+,-,+	MED15,KLHL22,MED15	278,-10683,278
chr3:48633314-48633971	chr3	+	48633322	48633946	True	NM_000094,NM_033629	chr3,chr3	-,+	COL7A1,TREX1	-729,-126144
chr19:50382201-50382582	chr19	+	50382273	50382515	True	NM_001168222,NM_024682,NM_032375,NM_001098633,NM_001098632	chr19,chr19,chr19,chr19,chr19	+,+,-,-,-	TBC1D17,TBC1D17,AKT1S1,AKT1S1,AKT1S1	-1642,-1642,-1695,-1661,-1629
chr11:85398693-85399051	chr11	+	85398969	85399058	True	NM_152723,NM_032273	chr11,chr11	-,+	CCDC89,TMEM126A	-1649,-40065
chr7:65971322-65971887	chr7	+	65971339	65971433	True	NM_001167961,NR_002933	chr7,chr7	+,-	KCTD7,LOC493754	122434,72115
chr5:21463159-21463911	chr6	-	58282174	58282227	True	NM_000947,NR_003660	chr6,chr6	+,-	PRIM2,GUSBP4	-1099806,5550
chr5:21463159-21463911	chr5	+	21463827	21463959	False	NR_027027,NR_027026,NM_004061,NR_027028	chr5,chr5,chr5,chr5	+,+,-,+	GUSBP1,GUSBP1,CDH12,GUSBP1	-4292,-4292,1389822,-4292
chr16:2838620-2839221	chr16	+	2838986	2839050	True	NM_152891,NM_001135086	chr16,chr16	-,+	PRSS33,PRSS41	-2278,9435
chr7:102290357-102291481	chr7	+	102290358	102290889	True	NM_001031618,NM_001166339,NM_001114403	chr7,chr7,chr7	+,+,-	SPDYE2,SPDYE2L,UPK3BL	19,19,-7120
chr7:102290357-102291481	chr7	+	44037088	44037404	False	NM_175064,NR_003655	chr7,chr7	+,-	SPDYE1,POLR2J4	3084,21394
chr7:102290357-102291481	chr7	-	76691966	76692016	False	NM_006682,NR_028058	chr7,chr7	-,+	FGL2,LOC100132832	137184,-23220
chr7:102290357-102291481	chr7	+	102191265	102191796	False	NM_001031618,NM_001166339,NM_001097615	chr7,chr7,chr7	+,+,-	SPDYE2,SPDYE2L,POLR2J3	19,19,21323
chr15:72978744-72979500	chr15	+	72978834	72979395	True	NR_002780,NM_033028	chr15,chr15	-,+	HIGD2B,BBS4	-344,-360
chr5:35047331-35048041	chr5	+	35047637	35048083	True	NM_194283,NM_031900	chr5,chr5	+,-	DNAJC21,AGXT2	-118004,207
chr19:45347511-45347906	chr19	+	45347670	45347732	True	NM_001042724,NM_145288,NM_002856	chr19,chr19,chr19	+,-,+	PVRL2,ZNF296,PVRL2	1660,232006,1660
chr12:53345362-53346009	chr12	+	53345611	53345873	True	NM_199187,NM_000224,NM_002273	chr12,chr12,chr12	+,+,-	KRT18,KRT18,KRT8	-3007,-2819,-46743
chr6:134671483-134672782	chr6	+	134672504	134672800	True	NM_004865,NM_001143676	chr6,chr6	+,-	TBPL1,SGK1	-398261,-33308
chr5:10584181-10585811	chr5	+	10584221	10585563	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-19848,175874
chr11:85338250-85338541	chr11	+	85338398	85338558	True	NR_036465,NM_001193537,NM_001193538,NM_018480,NM_001142699	chr11,chr11,chr11,chr11,chr11	+,+,+,+,-	TMEM126B,TMEM126B,TMEM126B,TMEM126B,DLG2	1063,1063,1063,1063,-84
chr2:153197501-153199320	chr2	+	153197519	153199085	True	NM_052905,NM_005843	chr2,chr2	+,-	FMNL2,STAM2	-5819,-165013
chr11:60931108-60932882	chr11	+	60931419	60932679	True	NM_001079807,NM_017966	chr11,chr11	+,-	PGA3,VPS37C	38304,-2503
chrX:6337937-6338736	chrX	+	6338146	6338436	True	NM_000351,NM_016379	chrX,chrX	+,-	STS,VCX3A	799035,114779
chr15:21283963-21284557	chr16	+	75274543	75274607	True	NM_001170719,NM_001906,NM_001170721	chr16,chr16,chr16	-,+,-	BCAR1,CTRB1,BCAR1	7681,-21724,-1563
chr15:21283963-21284557	chr15	+	21284180	21284604	False	NR_027411,NR_028506	chr15,chr15	+,-	GOLGA8C,NF1P1	-516568,-149555
chr4:37957933-37958287	chr4	+	37958035	37958296	True	NM_006607,NM_001085400	chr4,chr4	+,-	PTTG2,RELL1	3759,-270036
chr14:24738158-24738741	chr14	+	24738207	24738715	True	NM_000359,NM_004581,NM_182836,NM_174913	chr14,chr14,chr14,chr14	-,-,-,+	TGM1,RABGGTA,RABGGTA,C14orf21	-5791,2078,2138,30382
chr1:39344876-39345254	chr1	+	39344876	39345284	True	NR_037633,NR_037632,NR_037637,NR_037636,NR_037635,NR_037634,NM_012333,NM_030772,NM_001136275	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,-,-,-,+	GJA9-MYCBP,MYCBP,GJA9-MYCBP,GJA9-MYCBP,GJA9-MYCBP,GJA9-MYCBP,MYCBP,GJA9,AKIRIN1	2070,-5826,2070,2070,2070,2070,-5826,2070,111631
chr2:68869710-68870313	chr2	+	68870029	68870123	True	NM_001024680,NM_138964	chr2,chr2	-,+	FBXO48,PROKR1	-175639,2830
chr14:75421337-75421898	chr14	+	75421547	75421827	True	NM_014239,NM_002632	chr14,chr14	+,-	EIF2B2,PGF	47784,514
chr2:211037113-211038129	chr2	+	211037128	211038041	True	NM_152519,NM_199229	chr2,chr2	-,+	C2orf67,RPE	-1077,-169806
chr8:7313545-7313975	chr8	+	7313662	7313990	True	NM_001040703,NM_016512,NM_058206,NM_058207,NM_058200,NM_058201,NM_058202,NM_058203	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	+,-,-,-,-,-,-,-	DEFB105B,SPAG11B,SPAG11B,SPAG11B,SPAG11B,SPAG11B,SPAG11B,SPAG11B	31252,7252,-3775,-3775,7252,7252,7252,7252
chr8:7313545-7313975	chr8	-	7712600	7712928	False	NM_152250,NM_001081552,NM_058203	chr8,chr8,chr8	-,+,+	DEFB105A,SPAG11A,SPAG11B	-31240,-7249,-7249
chr16:19894946-19895190	chr16	+	19895074	19895142	True	NM_153208,NM_016235	chr16,chr16	+,-	IQCK,GPRC5B	-167347,1059
chr22:33398067-33398483	chr22	+	33398068	33398309	True	NM_003490,NM_000362,NM_133633	chr22,chr22,chr22	-,+,-	SYN3,TIMP3,SYN3	4554,-201319,4554
chr12:6423595-6424106	chr12	+	6423727	6424065	True	NM_001144857,NM_001144856,NM_001065,NM_018173	chr12,chr12,chr12,chr12	+,+,-,+	PLEKHG6,PLEKHG6,TNFRSF1A,PLEKHG6	-1961,-3679,27268,-4176
chr17:21188976-21189293	chr17	+	21189238	21189322	True	NM_152914,NM_145109,NM_002756	chr17,chr17,chr17	-,+,+	C17orf103,MAP2K3,MAP2K3	-32660,-1321,2025
chr6:15038304-15038632	chr6	+	15038512	15038651	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	207875,624695
chrX:149857595-149858097	chrX	+	149857633	149857887	True	NM_001184808,NM_003828	chrX,chrX	-,+	CD99L2,MTMR1	209452,3981
chr8:57012152-57013173	chr8	+	57012402	57012998	True	NM_005372,NM_001011667	chr8,chr8	-,+	MOS,CHCHD7	13600,111316
chr11:98985934-98986208	chr11	+	98985937	98986069	True	NM_175566,NM_001202474	chr11,chr11	+,-	CNTN5,PGR	-94123,2013781
chr17:79497573-79497936	chr17	+	79497578	79497928	True	NM_001077182,NM_012418,NR_037688	chr17,chr17,chr17	+,+,-	FSCN2,FSCN2,ACTG1	-2212,-2212,-17686
chr11:66727707-66728096	chr11	+	66727789	66727993	True	NM_000920,NM_001136485,NM_001040716	chr11,chr11,chr11	-,+,-	PC,C11orf86,PC	-1942,14760,-1942
chr16:4853548-4853931	chr16	+	4853583	4853881	True	NM_024589,NR_029455	chr16,chr16	-,+	ROGDI,LOC440335	-909,-8255
chr11:65641940-65642553	chr11	+	65642210	65642338	True	NR_037718,NM_016938,NM_001335	chr11,chr11,chr11	-,-,+	EFEMP2,EFEMP2,CTSW	-1805,-1805,4945
chrX:144903983-144904848	chrX	+	144904012	144904700	True	NM_004709,NM_032539,NM_001144010,NM_001144003,NM_001144004,NM_001144005,NM_001144006,NR_030589,NM_001144008,NM_001144009	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,+,+,-,+,+	CXorf1,SLITRK2,SLITRK2,SLITRK2,SLITRK2,SLITRK2,SLITRK2,MIR890,SLITRK2,SLITRK2	4227,-4716,-1197,-4716,-4716,-4716,-1197,171219,-1197,-1197
chr7:131011396-131012514	chr7	+	131011489	131012368	True	NR_015431,NM_013255	chr7,chr7	-,+	FLJ43663,MKLN1	-217927,226
chr11:61008760-61009191	chr11	+	61008777	61009229	True	NM_014224,NM_152718	chr11,chr11	+,-	PGA5,VWCE	-184,53609
chr11:61008760-61009191	chr11	+	60971115	60971567	False	NM_001079807,NM_017966	chr11,chr11	+,-	PGA3,VPS37C	-182,-42199
chr11:61008760-61009191	chr11	+	60989951	60990403	False	NM_017966,NM_001079808	chr11,chr11	-,+	VPS37C,PGA4	-61035,-181
chr13:76337310-76337785	chr13	+	76337314	76337831	True	NM_203497,NM_015842	chr13,chr13	-,+	COMMD6,LMO7	-225323,-2568
chr9:97138170-97139497	chr9	+	97138185	97139383	True	NM_017561,NM_032558	chr9,chr9	-,+	FAM22F,HIATL1	-47259,-1403
chr9:97138170-97139497	chr9	-	99773372	99774569	False	NM_001045477,NR_002894	chr9,chr9	+,-	FAM22G,HIATL2	-82137,1343
chr21:39631398-39631667	chr21	+	39631507	39631637	True	NM_002243,NM_005867,NM_170736	chr21,chr21,chr21	+,-,+	KCNJ15,DSCR4,KCNJ15	-2902,-138053,-2696
chr19:10396077-10397559	chr19	+	10396135	10397464	True	NM_003259,NM_001544,NM_001039132,NM_022377,NM_001103167	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	ICAM5,ICAM4,ICAM4,ICAM4,ZGLP1	3190,185,185,185,22819
chrX:55517229-55517447	chrX	+	55517229	55517461	True	NM_014061,NM_201286	chrX,chrX	+,-	MAGEH1,USP51	-38746,-1598
chr1:155111020-155111534	chr1	+	155111325	155111545	True	NM_018973,NM_153741,NM_018845,NM_001122839,NM_001122837	chr1,chr1,chr1,chr1,chr1	-,-,+,+,+	DPM3,DPM3,SLC50A1,SLC50A1,SLC50A1	1389,1502,-3088,-3088,-3088
chr16:88804090-88804345	chr16	+	88804102	88804352	True	NM_178841,NM_001012762	chr16,chr16	-,+	RNF166,CTU2	-31273,-31262
chr16:75528218-75528656	chr16	+	75528247	75528693	True	NM_007285,NM_021615	chr16,chr16	+,-	GABARAPL2,CHST6	71555,283
chr12:53975761-53976484	chr12	+	53975790	53976351	True	NM_001130059,NM_134324	chr12,chr12	-,+	ATF7,TARBP2	18512,-80464
chr5:180405564-180405868	chr5	+	180405857	180405923	True	NM_197975,NM_152283	chr5,chr5	+,-	BTNL3,ZFP62	9921,-117571
chr19:7505764-7506224	chr19	+	7505763	7506050	True	NR_024491,NM_001130955	chr19,chr19	-,+	LOC100128573,ARHGEF18	32256,-1242
chr13:32883580-32884031	chr13	+	32883582	32884047	True	NM_000059,NM_001136571	chr13,chr13	+,-	BRCA2,ZAR1L	5569,2103
chr4:9669217-9670173	chr4	+	9669344	9670216	True	NR_031688,NM_000798	chr4,chr4	-,+	MIR548I2,DRD5	-111407,113041
chr4:9669217-9670173	chr4	-	3978486	3978870	False	NM_000683,NR_024253	chr4,chr4	+,-	ADRA2C,LOC348926	-210575,-21338
chr11:64611736-64611980	chr11	+	64611736	64611980	True	NM_017525,NM_006244	chr11,chr11	-,+	CDC42BPG,PPP2R5B	111,80162
chr19:40973574-40974474	chr19	+	40973602	40973983	True	NM_000713,NM_020971	chr19,chr19	-,+	BLVRB,SPTBN4	-1877,-527
chr5:56246930-56247187	chr5	+	56247021	56247107	True	NM_001171990,NM_152622	chr5,chr5	+,-	C5orf35,MIER3	-41985,897
chr7:143953564-143955103	chr7	+	143953597	143955142	True	NR_002158,NM_001005328,NR_002157	chr7,chr7,chr7	-,-,-	OR2A20P,OR2A7,OR2A9P	-4901,1629,-5049
chr7:143953564-143955103	chr6	+	132019411	132020962	False	NM_030908,NM_005021	chr6,chr6	-,+	OR2A4,ENPP3	1629,-61020
chr18:29521125-29522422	chr18	+	29521465	29522350	True	NM_014939,NM_017831	chr18,chr18	-,+	TRAPPC8,RNF125	793,76094
chr15:42182868-42183491	chr15	+	42182946	42183490	True	NM_016642,NM_001114633	chr15,chr15	-,+	SPTBN5,PLA2G4B	2835,-51986
chr19:48675378-48675723	chr19	+	48675459	48675581	True	NM_000234,NM_153608	chr19,chr19	-,+	LIG1,ZNF114	-1899,99072
chr9:131484885-131486017	chr9	+	131485001	131485938	True	NM_013355,NM_032799	chr9,chr9	+,-	PKN3,ZDHHC12	-20250,522
chr7:154719716-154720459	chr7	+	154719815	154720391	True	NM_007349,NR_024477,NR_024476	chr7,chr7,chr7	-,+,+	PAXIP1,LOC100132707,LOC100132707	74341,-23,-23
chr9:66493961-66494204	chr9	+	66494087	66494173	True	NR_024443,NR_024496	chr9,chr9	-,+	LOC100133920,LOC442421	536859,95
chr18:813286-813532	chr18	+	813308	813555	True	NM_001099733,NM_005433	chr18,chr18	+,-	ADCYAP1,YES1	91388,-981
chr1:110697326-110698708	chr1	+	110697400	110698612	True	NM_006492,NM_001010898	chr1,chr1	-,+	ALX3,SLC6A17	-84078,-4319
chr7:72357828-72358288	chr7	+	72357882	72358084	True	NR_003666,NM_172020	chr7,chr7	-,+	SPDYE7P,POM121	-18227,-7998
chr7:72357828-72358288	chr7	-	75107690	75107741	False	NM_001099415,NM_001099435	chr7,chr7	-,+	POM121C,SPDYE5	7878,16557
chr7:72357828-72358288	chr7	+	102012649	102012700	False	NM_024653,NM_001146210	chr7,chr7	+,-	PRKRIP1,SPDYE6	24103,-15760
chr9:102864652-102865428	chr9	+	102864689	102865077	True	NM_015051,NM_014425,NM_183245	chr9,chr9,chr9	-,+,+	ERP44,INVS,INVS	-3359,-3237,-3237
chr6:144627911-144629722	chr6	+	144628270	144629445	True	NM_007124,NM_031287	chr6,chr6	+,-	UTRN,SF3B5	-15448,-211516
chr3:11267898-11269265	chr3	+	11267904	11268944	True	NM_001098211,NM_001128221	chr3,chr3	+,-	HRH1,VGLL4	-286,341504
chr19:53631313-53631871	chr19	+	53631347	53631773	True	NM_001164309,NR_028343,NM_001191055,NM_018355,NM_001136038	chr19,chr19,chr19,chr19,chr19	-,-,+,-,-	ZNF415,ZNF415,HERV-V2,ZNF415,ZNF415	4448,4450,-83410,4422,4448
chr2:139258549-139259180	chr2	+	139258578	139259149	True	NM_001001664,NM_007226	chr2,chr2	+,-	SPOPL,NXPH2	200,278712
chr1:212877258-212879181	chr1	+	212877651	212878933	True	NM_153606,NM_018664	chr1,chr1	+,-	FAM71A,BATF3	-79913,-4324
chr12:65002371-65003100	chr12	+	65002624	65003135	True	NR_037515,NM_178169	chr12,chr12	-,+	MIR548Z,RASSF3	13301,1157
chr2:16843865-16844470	chr2	+	16843867	16844508	True	NM_005378,NM_030797	chr2,chr2	+,-	MYCN,FAM49A	-763235,2683
chr3:9834424-9834640	chr3	+	9834427	9834675	True	NM_001024959,NM_133480,NM_001024960,NM_006354,NM_005718,NM_001198793,NM_001198780	chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,-,+,-,+,+,+	ARPC4,TADA3,ARPC4,TADA3,ARPC4,ARPC4-TTLL3,ARPC4	-299,-7,-299,-7,-246,-246,125
chr2:182546064-182546473	chr2	+	182546100	182546472	True	NM_002500,NM_001130445	chr2,chr2	-,+	NEUROD1,SSFA2	-708,209999
chr20:61584830-61585313	chr20	+	61584928	61585240	True	NM_022105,NM_022082	chr20,chr20	-,+	DIDO1,SLC17A9	-15624,-980
chr7:116592994-116593422	chr7	+	116593001	116593405	True	NR_002329,NR_002330,NM_021908,NM_018412	chr7,chr7,chr7,chr7	+,-,+,+	ST7OT4,ST7OT1,ST7,ST7	547,1033,-25,-25
chr2:95963192-95963594	chr2	+	95963442	95963524	True	NM_013434,NM_032788	chr2,chr2	+,-	KCNIP3,ZNF514	-421,-138179
chr20:45177726-45179155	chr20	+	45177750	45178859	True	NM_030777,NM_080721	chr20,chr20	+,-	SLC2A10,C20orf123	159419,405
chr17:27947442-27947975	chr17	+	27947752	27947896	True	NM_032854,NM_152345	chr17,chr17	-,+	CORO6,ANKRD13B	595,-27276
chr5:160201322-160202846	chr5	+	160201338	160202596	True	NR_029701,NM_025153	chr5,chr5	+,-	MIR146A,ATP10B	-289030,76681
chr17:29893042-29894159	chr17	+	29893123	29893998	True	NR_029710,NR_029856,NM_014210	chr17,chr17,chr17	+,+,-	MIR193A,MIR365-2,EVI2A	-6159,8431,-244356
chr17:77028302-77028738	chr17	+	77028377	77028733	True	NM_198594,NM_138793,NM_030968,NM_198593	chr17,chr17,chr17,chr17	+,-,+,+	C1QTNF1,CANT1,C1QTNF1,C1QTNF1	-8177,-22478,-8177,1738
chr3:108561125-108562098	chr3	+	108561185	108561948	True	NM_032579,NM_016388	chr3,chr3	-,+	RETNLB,TRAT1	-85055,-19616
chr19:54726859-54727096	chr19	+	54726868	54726958	True	NM_001013,NM_001081450,NM_006864	chr19,chr19,chr19	+,-,-	RPS9,LILRB3,LILRB3	-22193,51,51
chr19:54726859-54727096	chr19	+	54746620	54746710	False	NM_001013,NM_024318	chr19,chr19	+,-	RPS9,LILRA6	-41945,64
chrX:46988498-46988817	chrX	+	46988510	46988866	True	NM_001204466,NM_001135998	chrX,chrX	+,-	RBM10,NDUFB11	15750,15279
chr11:833825-834425	chr11	+	833856	834452	True	NM_003271,NM_001039490,NM_021128,NM_173584,NM_001025239,NM_139030,NM_004357,NM_001025238,NM_139029,NM_001025235,NM_001025234,NM_001025237,NM_001025236	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,-,+,+,+,+,+,+,+,+,+,+	TSPAN4,CD151,POLR2L,EFCAB4A,TSPAN4,CD151,CD151,TSPAN4,CD151,TSPAN4,TSPAN4,TSPAN4,TSPAN4	8371,-955,8127,-6322,8371,-955,-955,8371,-955,8488,9628,9993,8488
chr16:31019650-31019873	chr16	+	31019779	31019857	True	NM_025193,NM_052874	chr16,chr16	+,-	HSD3B7,STX1B	-23311,2022
chr7:130373192-130374065	chr7	+	130373205	130374046	True	NR_029899,NM_052933	chr7,chr7	+,-	MIR335,TSGA13	-237313,-1799
chr16:23566732-23567050	chr16	+	23566828	23566986	True	NM_019116,NR_003501,NM_001083614	chr16,chr16,chr16	+,-,-	UBFD1,EARS2,EARS2	1875,1762,1762
chr4:169424219-169424494	chr4	+	169424235	169424529	True	NM_001012967,NM_001166108,NM_016081	chr4,chr4,chr4	-,+,+	DDX60L,PALLD,PALLD	-22597,-6069,-6069
chr1:151799998-151800475	chr1	+	151800106	151800392	True	NR_024237,NM_001001523,NM_005060	chr1,chr1,chr1	+,-,-	LOC100132111,RORC,RORC	10552,-1553,4006
chr19:18358713-18359224	chr19	+	18358838	18359168	True	NM_000923,NR_036155,NR_036575	chr19,chr19,chr19	-,+,-	PDE4C,MIR3188,LOC729966	34,33718,7111
chr16:14409776-14411039	chr16	+	14409838	14410757	True	NR_029854,NM_001134477	chr16,chr16	+,-	MIR365-1,PARN	-6754,313413
chr8:124734015-124734701	chr8	+	124734116	124734716	True	NM_144963,NM_001003954	chr8,chr8	+,-	FAM91A1,ANXA13	46165,14981
chr20:32580696-32580929	chr20	+	32580712	32580914	True	NM_016732,NM_007367,NM_003908	chr20,chr20,chr20	+,+,-	RALY,RALY,EIF2S2	817,817,119221
chr22:41807824-41808269	chr22	+	41807868	41808072	True	NM_003216,NM_016272	chr22,chr22	+,-	TEF,TOB2	-29956,35005
chr8:38009977-38010582	chr8	+	38010383	38010487	True	NM_001204878,NM_000349	chr8,chr8	+,-	BAG4,STAR	23618,-1783
chr1:151121726-151121945	chr1	+	151121891	151121951	True	NM_001178061,NM_030913,NM_001178062,NM_024575,NM_001204848	chr1,chr1,chr1,chr1,chr1	-,-,-,+,+	SEMA6C,SEMA6C,SEMA6C,TNFAIP8L2,TNFAIP8L2-SCNM1	-2751,-2751,-2751,7153,7153
chr12:121837076-121837412	chr12	+	121837178	121837418	True	NM_001137559,NM_194271,NM_025126	chr12,chr12,chr12	-,+,+	ANAPC5,RNF34,RNF34	-45166,483,483
chr13:50656616-50656955	chr13	+	50656656	50656998	True	NR_029485,NR_002605	chr13,chr13	-,+	MIR15A,DLEU1	-33319,-293
chr12:117360737-117361419	chr12	+	117361015	117361322	True	NM_003806,NM_153348	chr12,chr12	-,+	HRK,FBXW8	-41783,-12305
chr17:39225735-39227266	chr17	+	39225918	39226957	True	NM_001165252,NM_033184,NM_033061	chr17,chr17,chr17	-,-,+	LOC730755,KRTAP2-4,KRTAP4-7	-9574,-3787,13501
chr6:33332848-33333444	chr6_qbl_hap6	+	4565108	4565685	False	NM_001350,NM_002263	chr6_qbl_hap6,chr6_qbl_hap6	-,+	DAXX,KIFC1	-42066,25854
chr6:33332848-33333444	chr6_mcf_hap5	+	4806613	4807190	False	NM_001350,NM_001185181	chr6_mcf_hap5,chr6_mcf_hap5	-,+	DAXX,PFDN6	-42078,-75508
chr6:33332848-33333444	chr6	+	33332867	33333444	True	NR_024517,NM_002263	chr6,chr6	-,+	DAXX,KIFC1	-42074,25868
chr6:33332848-33333444	chr6_apd_hap1	+	4619660	4620237	False	NM_033554,NR_001435	chr6_apd_hap1,chr6_apd_hap1	-,+	HLA-DPA1,HLA-DPB2	-291481,-252654
chr6:33332848-33333444	chr6_cox_hap2	+	4776681	4777258	False	NM_001350,NM_001185181	chr6_cox_hap2,chr6_cox_hap2	-,+	DAXX,PFDN6	-42070,-75506
chr1:47276263-47276774	chr1	+	47276425	47276759	True	NM_001099772,NR_002788	chr1,chr1	+,-	CYP4B1,CYP4Z2P	-11806,89438
chr12:50496836-50497776	chr12	+	50497000	50497791	True	NM_032901,NM_147190,NM_005276	chr12,chr12,chr12	+,-,+	C12orf62,LASS5,GPD1	8108,63356,9
chr12:49074865-49075618	chr12	+	49074973	49075482	True	NR_029448,NM_017822	chr12,chr12	+,-	LOC255411,C12orf41	45735,603
chr22:18507301-18507665	chr22	+	18507513	18507641	True	NM_001136004,NM_015241,NR_024417,NM_001122731	chr22,chr22,chr22,chr22	-,-,+,-	MICAL3,MICAL3,FLJ41941,MICAL3	-188,-188,4509,-188
chr2:234620175-234620837	chr2	+	234620267	234620765	True	NM_001001394,NM_019078,NM_007120	chr2,chr2,chr2	-,+,+	DNAJB3,UGT1A5,UGT1A4	31946,872,6672
chrX:23018146-23018976	chrX	+	23018625	23019012	True	NM_182699,NM_001033583	chrX,chrX	+,-	DDX53,ACOT9	-589,742446
chr20:48552542-48552997	chr20	+	48552657	48552821	True	NM_006038,NM_018683	chr20,chr20	-,+	SPATA2,RNF114	-20577,92
chr13:67802882-67803240	chr13	+	67802910	67803272	True	NR_002717,NM_020403,NM_203487	chr13,chr13,chr13	+,-,-	ATXN8OS,PCDH9,PCDH9	2878072,1246,1246
chr17:73010439-73012172	chr17	+	73010853	73011839	True	NM_001545,NM_001003785	chr17,chr17	+,-	ICT1,ATP5H	-2137,31285
chr4:68427511-68427930	chr4	+	68427840	68427909	True	NM_012108,NM_001812	chr4,chr4	+,-	STAP1,CENPC1	-3456,-16584
chr1:13737708-13738572	chr1	+	13737913	13738457	True	NM_001100114,NM_001099852,NM_001099850	chr1,chr1,chr1	+,+,-	PRAMEF21,PRAMEF20,PRAMEF18	4344,-1066,-39508
chr1:13737708-13738572	chr1	+	13517144	13517616	False	NM_001100114,NM_001099852,NM_001099850	chr1,chr1,chr1	+,+,-	PRAMEF21,PRAMEF20,PRAMEF18	4346,-1137,-39575
chrY:7142720-7142996	chrY	+	7142807	7142879	True	NR_028062,NM_001143	chrY,chrY	+,-	PRKY,AMELY	-845,-400739
chr5:63803623-63804944	chr5	+	63803682	63804634	True	NM_001029875,NM_173829	chr5,chr5	+,-	RGS7BP,SREK1IP1	-1281,259926
chr4:49514907-49515284	chr4	+	49515131	49515187	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-526917,-606316
chr10:28557162-28557515	chr10	+	28557170	28557327	True	NR_024557,NM_173496	chr10,chr10	+,-	WAC,MPP7	264099,13797
chr1:171751562-171753250	chr1	+	171751754	171752969	True	NM_001007239,NM_014955,NM_015935,NR_033704	chr1,chr1,chr1,chr1	+,+,+,-	METTL13,METTL13,METTL13,VAMP4	-1046,-1046,-1046,-40375
chr18:3380535-3380951	chr18	+	3380649	3380993	True	NM_019856,NM_174886	chr18,chr18	-,+	MYOM1,TGIF1	-160543,31078
chr5:66491135-66492419	chr5	+	66491648	66492404	True	NM_015183,NM_005582	chr5,chr5	+,-	MAST4,CD180	-367095,263
chr20:39767334-39767606	chr20	+	39767363	39767603	True	NM_002660,NM_182811,NM_015035	chr20,chr20,chr20	+,+,-	PLCG1,PLCG1,ZHX3	-1253,-1253,161186
chr17:48132416-48132706	chr17	+	48132461	48132751	True	NM_005220,NM_002204,NM_005501	chr17,chr17,chr17	-,+,+	DLX3,ITGA3,ITGA3	-59873,588,588
chr6:142490199-142491861	chr6	+	142490509	142491569	True	NM_016485,NM_002511	chr6,chr6	+,-	VTA1,NMBR	-22164,-80573
chr1:200636158-200637289	chr1	+	200636526	200637151	True	NM_203459,NM_001031725	chr1,chr1	+,-	CAMSAP1L1,DDX59	71534,2032
chr8:126014773-126015630	chr8	+	126014976	126015653	True	NM_003129,NM_014846	chr8,chr8	+,-	SQLE,KIAA0196	-4318,88458
chr20:1293212-1293558	chr20	+	1293217	1293507	True	NM_014723,NM_015685	chr20,chr20	+,-	SNPH,SDCBP2	-46308,860
chr18:33075112-33076022	chr18	+	33075497	33076033	True	NM_001098817,NM_020474,NM_194281	chr18,chr18,chr18	-,+,-	INO80C,GALNT1,INO80C	1972,158499,1972
chr1:38472805-38473730	chr1	+	38473126	38473713	True	NM_004468,NM_016037	chr1,chr1	-,+	FHL3,UTP11L	-1892,4670
chr20:61275170-61275414	chr20	+	61275278	61275412	True	NM_016354,NR_024470	chr20,chr20	+,-	SLCO4A1,LOC100127888	-1532,22611
chr1:27996048-27996284	chr1	+	27996051	27996285	True	NM_022872,NM_002038,NM_022873,NM_001143912	chr1,chr1,chr1,chr1	-,-,-,+	IFI6,IFI6,IFI6,FAM76A	2495,2495,2495,56204
chr12:31900345-31900837	chr12	+	31900514	31900804	True	NR_004854,NM_001135863	chr12,chr12	-,+	AMN1,METTL20	-18406,-87964
chr2:234821612-234823354	chr2	+	234821745	234823263	True	NM_024080,NR_024322	chr2,chr2	+,-	TRPM8,MSL3P1	2779,-44690
chr19:36486497-36486849	chr19	+	36486512	36486830	True	NM_001039876,NM_001042631	chr19,chr19	-,+	C19orf46,SDHAF1	12892,-473
chr1:203150700-203151132	chr1	+	203150750	203151062	True	NM_001276,NM_004997,NM_001048230	chr1,chr1,chr1	-,-,+	CHI3L1,MYBPH,ADORA1	4910,-5808,-53965
chrX:70710668-70711808	chrX	+	70711004	70711510	True	NR_002226,NM_181672	chrX,chrX	-,+	INGX,OGT	1150,41401
chr15:89631407-89631668	chr15	+	89631413	89631615	True	NM_007011,NM_152924,NM_000326	chr15,chr15,chr15	+,+,-	ABHD2,ABHD2,RLBP1	-83,-83,133357
chr2:11507145-11508361	chr2	+	11507302	11508396	True	NM_004850,NM_014668	chr2,chr2	-,+	ROCK2,GREB1	-22591,165845
chr2:176866581-176866907	chr2	+	176866630	176866906	True	NM_030650,NM_000523	chr2,chr2	-,+	KIAA1715,HOXD13	162,90625
chr5:55007945-55008175	chr5	+	55008016	55008126	True	NM_173514,NM_001166533	chr5,chr5	-,+	SLC38A9,DDX4	87,25718
chr1:145108867-145109207	chr1	+	145108931	145109012	True	NM_004892,NM_022359	chr1,chr1	+,-	SEC22B,PDE4DIP	-12581,-32745
chr10:124223857-124224885	chr10	+	124224011	124224899	True	NM_001099667,NM_001010912,NM_002775	chr10,chr10,chr10	+,-,+	ARMS2,C10orf120,HTRA1	-9883,234501,-3021
chr2:220494922-220495445	chr2	+	220494923	220495317	True	NM_001173408,NM_005070,NM_201574	chr2,chr2,chr2	-,+,+	OBSL1,SLC4A3,SLC4A3	-58655,-2682,-2682
chr2:47144149-47144429	chr2	+	47144163	47144477	True	NM_139279,NM_001171509,NM_020458,NM_001171507,NM_001171510,NM_001171506	chr2,chr2,chr2,chr2,chr2,chr2	-,-,+,-,-,-	MCFD2,MCFD2,TTC7A,MCFD2,MCFD2,MCFD2	-1156,-1156,23835,-912,-912,-1156
chr16:89755670-89755932	chr16	+	89755687	89755975	True	NM_001098533,NM_001160367,NM_052987,NR_027702,NR_027703,NM_152339,NM_052988	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,-,+	CDK10,CDK10,CDK10,CDK10,CDK10,SPATA2L,CDK10	-2662,-2662,-2662,-2662,-2662,12196,-2662
chrX:75392507-75392918	chrX	+	75392553	75392793	True	NM_016500,NM_138703	chrX,chrX	+,-	CXorf26,MAGEE2	-8,-387474
chr12:56473557-56473923	chr12	+	56473610	56473972	True	NM_001005915,NM_001130420,NM_001982	chr12,chr12,chr12	+,-,+	ERBB3,SMARCC2,ERBB3	61,109429,-22
chr16:19296335-19296586	chr16	+	19296485	19296615	True	NR_024436,NM_016641	chr16,chr16	+,-	LOC728276,GDE1	489,236891
chr22:35471771-35472636	chr22	+	35471785	35472609	True	NM_001008494,NM_005368	chr22,chr22	+,-	ISX,MB	-9713,540825
chr12:48099796-48100217	chr12	+	48099867	48100241	True	NM_001146076,NM_001146075,NM_017842,NM_024604	chr12,chr12,chr12,chr12	-,-,+,-	RPAP3,RPAP3,SLC48A1,RPAP3	-23,-23,66725,-23
chr17:79270284-79271362	chr17	+	79270487	79271142	True	NM_001037984,NM_138570,NM_001086521	chr17,chr17,chr17	-,-,+	SLC38A10,SLC38A10,C17orf89	-1391,-1391,-57442
chr19:53837955-53838672	chr19	+	53838310	53838430	True	NM_138374,NM_033341	chr19,chr19	+,-	ZNF845,BIRC8	-1372,-43435
chr14:72397833-72398738	chr14	+	72398001	72398703	True	NM_012074,NM_001204418,NM_001204419,NM_001204416,NM_001204417,NM_001204423,NM_001204422,NM_001204421,NM_001204420,NM_001204424,NM_004296	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	-,+,+,+,+,+,+,+,+,+,+	DPF3,RGS6,RGS6,RGS6,RGS6,RGS6,RGS6,RGS6,RGS6,RGS6,RGS6	962156,1082,1082,1082,1082,113,1082,1082,1082,452,1082
chr9:34459232-34459602	chr9	+	34459256	34459602	True	NM_001184941,NM_001184940,NM_001184943,NM_001184942,NM_001184945,NM_012144,NM_147202	chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,-,-,-,-,+,-	C9orf25,C9orf25,C9orf25,C9orf25,C9orf25,DNAI1,C9orf25	-688,-688,-688,-688,-688,-496,-688
chr4:95680106-95680865	chr4	+	95680166	95680720	True	NM_001203,NM_014485	chr4,chr4	+,-	BMPR1B,HPGDS	-1089,-416139
chr21:39659605-39660053	chr21	+	39659604	39659891	True	NM_005867,NM_170737	chr21,chr21	-,+	DSCR4,KCNJ15	-166150,-15235
chr1:145517798-145519158	chr1	+	145518154	145519029	True	NR_002328,NM_003846,NM_001184795,NM_003637	chr1,chr1,chr1,chr1	-,+,+,+	GNRHR2,PEX11B,PEX11B,ITGA10	-2078,-2040,-1645,5960
chr15:25104059-25105091	chr15	+	25104198	25105108	True	NM_022805,NM_130838	chr15,chr15	+,-	SNRPN,UBE3A	-2551,545595
chr2:114333300-114334841	chr2	+	114334036	114334344	True	NR_026821,NR_024077,NR_024005	chr2,chr2,chr2	+,+,-	FAM138B,WASH2P,DDX11L2	614,6885,24863
chr9:86535068-86535950	chr9	+	86535305	86535949	True	NM_017576,NM_024945	chr9,chr9	-,+	KIF27,RMI1	443,59687
chr10:124596395-124598061	chr10	+	124596411	124598003	True	NR_037912,NR_027282,NM_022034	chr10,chr10,chr10	-,+,-	CUZD1,LOC399815,CUZD1	7740,41145,7740
chr20:52822898-52824104	chr20	+	52822948	52824092	True	NM_001128915,NM_002623	chr20,chr20	-,+	CYP24A1,PFDN4	-32432,409
chr19:2236596-2236813	chr19	+	2236636	2236862	True	NR_031596,NM_007165,NM_018049	chr19,chr19,chr19	-,+,-	MIR1227,SF3A2,PLEKHJ1	-2488,41,-308
chr19:56166921-56167675	chr19	+	56167144	56167670	True	NM_203374,NM_007279,NM_001012478,NM_013301	chr19,chr19,chr19,chr19	-,+,+,+	ZNF784,U2AF2,U2AF2,CCDC106	-31203,-1779,-1779,-8241
chr1:39339692-39340465	chr1	+	39339754	39340292	True	NR_037633,NR_037632,NR_037637,NR_037636,NR_037635,NR_037634,NM_012333,NM_030772,NM_001136275	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,-,-,-,+	GJA9-MYCBP,MYCBP,GJA9-MYCBP,GJA9-MYCBP,GJA9-MYCBP,GJA9-MYCBP,MYCBP,GJA9,AKIRIN1	7056,-704,7056,7056,7056,7056,-704,7056,116623
chr13:73302142-73302343	chr13	+	73302154	73302386	True	NM_001071775,NM_024808	chr13,chr13	-,+	MZT1,C13orf34	-216,-163
chr4:76486356-76486775	chr4	+	76486450	76486772	True	NR_037914,NM_178497	chr4,chr4	-,+	RCHY1,C4orf26	-46810,-5244
chr19:44288503-44289374	chr19	+	44288502	44289334	True	NM_181845,NM_002250	chr19,chr19	+,-	ZNF283,KCNN4	42138,-3093
chr9:116262510-116263580	chr9	+	116262606	116263554	True	NM_017443,NM_130795	chr9,chr9	-,+	POLE3,RGS3	-89577,152
chr15:60923733-60924150	chr15	+	60923893	60924179	True	NM_012182,NM_002943,NM_134260	chr15,chr15,chr15	+,-,-	FOXB1,RORA,RORA	-627523,-4164,-4164
chr20:42186055-42186424	chr20	+	42186057	42186473	True	NM_016276,NM_001199264,NM_001008901,NM_170693	chr20,chr20,chr20,chr20	+,+,-,+	SGK2,SGK2,GTSF1L,SGK2	8263,7281,169219,1161
chr15:43479166-43479558	chr15	+	43479225	43479471	True	NR_027513,NM_000119,NR_027514,NM_012142,NM_037370	chr15,chr15,chr15,chr15,chr15	+,-,+,+,+	CCNDBP1,EPB42,CCNDBP1,CCNDBP1,CCNDBP1	-1821,33914,-1821,-1821,-1149
chr6:150345163-150346188	chr6	+	150345359	150346115	True	NM_025218,NM_130900	chr6,chr6	+,-	ULBP1,RAET1L	-60267,603
chr12:56729108-56729780	chr12	+	56729281	56729797	True	NM_001127460,NM_014871,NM_001166279,NM_016584	chr12,chr12,chr12,chr12	-,-,-,+	PAN2,PAN2,PAN2,IL23A	-1748,-1444,-1444,2865
chr19:3506032-3506268	chr19	+	3506042	3506132	True	NM_031304,NM_016263,NM_001145165	chr19,chr19,chr19	-,+,-	DOHH,FZR1,DOHH	-5421,162,-5104
chr12:4227629-4227875	chr12	+	4227658	4227890	True	NM_001759,NM_020367	chr12,chr12	+,-	CCND2,PARP11	155011,-245050
chr8:57011369-57012152	chr8	+	57011664	57012000	True	NM_005372,NM_001011667	chr8,chr8	-,+	MOS,CHCHD7	14591,112314
chr22:21041819-21042758	chr22	+	21042229	21042526	True	NM_002650,NR_024592	chr22,chr22	-,+	PI4KA,POM121L4P	46479,1316
chr4:100872124-100872886	chr4	+	100872151	100872574	True	NM_001031723,NM_002106,NR_002799	chr4,chr4,chr4	-,-,+	DNAJB14,H2AFZ,LOC256880	-4272,-639,-566
chr7:148938377-148939234	chr7	+	148938542	148939004	True	NM_012256,NM_001001661	chr7,chr7	+,-	ZNF212,ZNF425	-1858,-115104
chr17:75277934-75278248	chr17	+	75278027	75278277	True	NM_001113492,NM_001113491,NR_036200	chr17,chr17,chr17	+,+,-	SEPT9,SEPT9,MIR4316	5695,-586,114909
chr7:80483933-80485726	chr7	+	80483942	80485759	True	NM_006379,NM_001127444	chr7,chr7	-,+	SEMA3C,CD36	62966,-208231
chr11:834584-834883	chr11	+	834632	834932	True	NM_003271,NM_001039490,NM_021128,NM_173584,NM_001025239,NM_139030,NM_004357,NM_001025238,NM_139029,NM_001025235,NM_001025234,NM_001025237,NM_001025236	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,-,+,+,+,+,+,+,+,+,+,+	TSPAN4,CD151,POLR2L,EFCAB4A,TSPAN4,CD151,CD151,TSPAN4,CD151,TSPAN4,TSPAN4,TSPAN4,TSPAN4	7891,-1731,7647,-7098,7891,-1731,-1731,7891,-1731,8008,9148,9513,8008
chr5:78998946-78999635	chr5	+	78998960	78999505	True	NM_004272,NM_153610	chr5,chr5	-,+	HOMER1,CMYA5	-189260,-13364
chr5:76114473-76114736	chr5	+	76114485	76114641	True	NM_005242,NM_004101	chr5,chr5	+,-	F2RL1,F2RL2	191,-195245
chr6:45347457-45348472	chr6	+	45347630	45348302	True	NM_004348,NM_181356,NM_003599	chr6,chr6,chr6	+,-,-	RUNX2,SUPT3H,SUPT3H	41611,-1960,-2055
chr1:13183953-13184212	chr1	+	13184001	13184221	True	NM_001100631,NM_001136561	chr1,chr1	+,-	PRAMEF22,LOC440563	-148509,155
chr11:71159637-71159843	chr11	+	71159644	71159868	True	NM_018161,NM_001360,NM_001163817	chr11,chr11,chr11	+,-,-	NADSYN1,DHCR7,DHCR7	4348,-167,-167
chr15:60864682-60865742	chr15	+	60864784	60865548	True	NM_134262,NM_012182	chr15,chr15	-,+	RORA,FOXB1	19209,-568422
chr3:9448214-9448866	chr3	+	9448427	9448737	True	NR_027007,NM_001080517	chr3,chr3	-,+	LOC440944,SETD5	-9253,-9081
chr3:45934386-45935809	chr3	+	45934507	45935733	True	NM_020347,NM_006641,NM_031200,NR_036525	chr3,chr3,chr3,chr3	-,+,+,+	LZTFL1,CCR9,CCR9,CCR9	-50886,-6562,-6562,-6562
chr3:98622667-98623568	chr3	+	98622701	98623347	True	NM_006100,NM_080927	chr3,chr3	+,-	ST3GAL6,DCBLD2	-171180,-2168
chrX:122994592-122995639	chrX	+	122994688	122995671	True	NM_001167,NM_001204401,NR_037916,NM_001081550	chrX,chrX,chrX,chrX	+,+,+,-	XIAP,XIAP,XIAP,THOC2	-723,-1078,-723,-127784
chr18:74731855-74732108	chr18	+	74731941	74732101	True	NM_007345,NM_002385,NM_001025081,NM_001025090,NM_001025092	chr18,chr18,chr18,chr18,chr18	+,-,-,-,-	ZNF236,MBP,MBP,MBP,MBP	-195876,-2886,-2886,-2886,-2886
chr14:70535141-70535534	chr14	+	70535372	70535445	True	NM_022137,NM_182936	chr14,chr14	+,-	SMOC1,SLC8A3	-189320,11534
chr4:123299632-123300070	chr4	+	123299971	123300113	True	NM_000586,NM_139243,NM_001159295,NM_001159285	chr4,chr4,chr4,chr4	-,+,+,+	IL2,ADAD1,ADAD1,ADAD1	77587,7,481,481
chr10:43049857-43050348	chr10	+	43049900	43050024	True	NR_026827,NR_026777	chr10,chr10	+,-	LOC84856,ZNF37BP	-79018,-1620
chr16:70833427-70834333	chr16	+	70833646	70834275	True	NR_034083,NM_018052	chr16,chr16	+,-	LOC100130894,VAC14	-44741,837
chr19:49839201-49839532	chr19	+	49839212	49839522	True	NM_001040031,NM_014037,NM_001774	chr19,chr19,chr19	+,-,+	CD37,SLC6A16,CD37	-593,-10738,-593
chr19:45446906-45447142	chr19	+	45446997	45447088	True	NM_001646,NM_145288,NR_037932,NM_000483	chr19,chr19,chr19,chr19	+,-,+,+	APOC4,ZNF296,APOC4-APOC2,APOC2	-1561,132661,-1561,2150
chr11:750544-751649	chr11	+	750836	751375	True	NM_006755,NM_182612	chr11,chr11	+,-	TALDO1,PDDC1	-3456,26163
chr3:45636352-45637004	chr3	+	45636365	45636941	True	NM_014240,NR_033947	chr3,chr3	+,-	LIMD1,LOC644714	-93,93483
chr7:127881569-127882391	chr7	+	127881768	127882418	True	NM_000230,NM_001166135	chr7,chr7	+,-	LEP,RBM28	-488,101594
chr2:167317012-167318453	chr2	+	167317049	167318284	True	NM_001079810,NM_002976	chr2,chr2	+,-	XIRP2,SCN7A	426712,25244
chr13:113623137-113623345	chr13	+	113623197	113623299	True	NR_034002,NM_001112732	chr13,chr13	-,+	MCF2L-AS1,MCF2L	-245,-491
chr4:25927152-25927392	chr4	+	25927186	25927408	True	NM_001145432,NM_015187	chr4,chr4	+,-	C4orf52,SEL1L3	-11423,-62576
chr2:58468174-58468388	chr2	+	58468267	58468397	True	NM_001114636,NM_001130481,NM_018062	chr2,chr2,chr2	-,+,-	FANCL,VRK2,FANCL	168,-194471,168
chr7:33179381-33179795	chr7	+	33179393	33179610	True	NM_203288,NM_198428	chr7,chr7	-,+	RP9,BBS9	-30391,-10294
chr3:15900187-15900448	chr3	+	15900220	15900482	True	NM_015199,NR_030289	chr3,chr3	-,+	ANKRD28,MIR563	621,14795
chr4:71340715-71341648	chr4	+	71341059	71341691	True	NM_144646,NM_001145007,NM_152291	chr4,chr4,chr4	-,+,+	IGJ,MUC7,MUC7	190707,-3449,-3290
chr2:34085481-34086430	chr2	+	34085606	34086473	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-346715,-132322
chr9:39723764-39724145	chr9	+	39724005	39724078	True	NR_003528,NM_001085452	chr9,chr9	-,+	LOC653501,FAM75A1	-259479,160896
chr9:39723764-39724145	chr9	+	39194705	39194778	False	NM_033655,NM_001085452	chr9,chr9	-,+	CNTNAP3,FAM75A1	93579,160920
chr8:145029152-145029364	chr8	+	145029152	145029372	True	NM_201379,NM_201380,NM_000837,NR_030383	chr8,chr8,chr8,chr8	-,-,+,-	PLEC,PLEC,GRINA,MIR661	-1064,-4108,34853,-9705
chr1:92505301-92506175	chr1	+	92505585	92505736	True	NM_001195684,NM_173567	chr1,chr1	-,+	TGFBR3,EPHX4	-134026,-10118
chr22:36819553-36819794	chr22	+	36819594	36819724	True	NM_145343,NM_002473	chr22,chr22	+,-	APOL1,MYH9	-170528,-35531
chr1:162772713-162773310	chr10	+	38657558	38658106	False	NR_027269,NR_003086	chr10,chr10	-,+	SEPT7L,HSD17B7P2	33724,-12301
chr1:162772713-162773310	chr1	+	162772727	162773331	True	NM_178550,NM_016371	chr1,chr1	-,+	C1orf110,HSD17B7	65324,-12282
chr5:782437-782894	chr5	+	782488	782862	True	NM_001166260,NM_024786	chr5,chr5	+,-	TRIP13,ZDHHC11	110106,68289
chr5:782437-782894	chr5	+	690429	690803	False	NM_018140,NM_007030	chr5,chr5	+,-	CEP72,TPPP	-78075,2757
chr17:75177585-75178512	chr17	+	75177870	75178447	True	NM_001144001,NR_036200	chr17,chr17	+,-	SEC14L1,MIR4316	2847,214742
chr11:73693960-73694384	chr11	+	73694046	73694426	True	NM_153614,NM_003355	chr11,chr11	+,-	DNAJB13,UCP2	-32733,-157
chr12:48294624-48295336	chr12	+	48294675	48295385	True	NM_001143841,NM_000376,NM_001017536,NM_001017535	chr12,chr12,chr12,chr12	+,-,-,-	TMEM106C,VDR,VDR,VDR	61944,3479,3479,3479
chr19:409925-410125	chr19	+	409962	410070	True	NM_001136263,NM_130760	chr19,chr19	-,+	C2CD4C,MADCAM1	-792,86419
chr12:95612637-95613513	chr12	+	95612662	95613529	True	NM_017599,NM_018351	chr12,chr12	+,-	VEZT,FGD6	-1191,-1422
chr1:64059642-64060100	chr1	+	64059763	64060119	True	NM_001172819,NM_014288,NM_002633	chr1,chr1,chr1	+,-,+	PGM1,ITGB3BP,PGM1	-334,-70928,-867
chr19:11466433-11467763	chr19	+	11466497	11467713	True	NM_001170635,NM_001080503,NM_022737,NM_198536,NM_001145416,NM_033408	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,-,-,-	LPPR2,CCDC159,LPPR2,TMEM205,TMEM205,TMEM205	-486,-9367,-486,-9516,-9516,-9516
chr14:88852250-88852510	chr14	+	88852351	88852499	True	NM_021161,NM_001040428,NM_018418	chr14,chr14,chr14	-,+,+	KCNK10,SPATA7,SPATA7	-59095,-414,-414
chr10:33625001-33625308	chr10	+	33625027	33625201	True	NM_001024629,NM_001024628,NM_024688,NM_003873	chr10,chr10,chr10,chr10	-,-,+,-	NRP1,NRP1,C10orf68,NRP1	-1194,-1194,-768427,-1194
chr3:27409705-27410654	chr3	+	27409860	27410498	True	NM_052953,NM_199347	chr3,chr3	+,-	LRRC3B,NEK10	-745611,464
chr7:94943594-94944217	chr7	+	94943754	94944252	True	NM_145872,NM_000446	chr7,chr7	+,-	ASB4,PON1	170960,9682
chr6:97285710-97286059	chr6	+	97285786	97286078	True	NM_052904,NM_030784,NM_001143957	chr6,chr6,chr6	+,-,-	KLHL32,GPR63,GPR63	86417,-433,-433
chr5:89913217-89913678	chr5	+	89913581	89913728	True	NM_198273,NR_003149	chr5,chr5	-,+	LYSMD3,GPR98	-88180,-59029
chr17:47213146-47214196	chr17	+	47213685	47214245	True	NM_001159388,NM_031498,NM_001159387,NM_153446	chr17,chr17,chr17,chr17	+,-,+,+	B4GALNT2,GNGT2,B4GALNT2,B4GALNT2	-3928,72548,-3619,-3421
chr11:2925568-2926056	chr11	+	2925701	2926047	True	NM_183233,NM_002555,NM_007105	chr11,chr11,chr11	+,+,-	SLC22A18,SLC22A18,SLC22A18AS	-4801,-2240,-526
chr5:23507081-23507416	chr5	+	23507088	23507234	True	NM_020227,NM_004061	chr5,chr5	+,-	PRDM9,CDH12	489,-653357
chr22:32810282-32810659	chr22	+	32810310	32810478	True	NM_014306,NM_001098535	chr22,chr22	-,+	C22orf28,RFPL3	-2036,-56507
chr15:45668434-45668945	chr15	+	45668498	45668844	True	NM_001482,NR_033252	chr15,chr15	-,+	GATM,LOC145663	2186,2053
chr22:36816387-36818084	chr22	+	36816455	36817614	True	NM_145343,NM_002473	chr22,chr22	+,-	APOL1,MYH9	-167395,-32392
chr2:152219297-152219549	chr2	+	152219319	152219530	True	NM_007115,NM_004688	chr2,chr2	+,-	TNFAIP6,NMI	-5275,-72889
chr17:62781079-62781341	chr17	+	62781207	62781323	True	NR_026899,NM_138363,NR_027487	chr17,chr17,chr17	-,+,-	LOC146880,CCDC45,LOC146880	-3090,-278100,-3585
chr18:32301934-32303717	chr18	+	32301933	32303329	True	NM_032978,NM_003787	chr18,chr18	+,-	DTNA,NOL4	-11790,-498418
chr1:223561540-223563240	chr1	+	223561798	223562802	True	NM_152610,NM_001037175	chr1,chr1	+,-	C1orf65,SUSD4	3912,-24254
chr1:206869378-206871009	chr1	+	206869428	206870682	True	NM_032960,NM_000572	chr1,chr1	+,-	MAPKAPK2,IL10	-11190,75207
chr6:37233171-37234396	chr6	+	37233217	37234067	True	NM_001162900,NM_017772,NM_145316	chr6,chr6,chr6	-,+,-	TMEM217,TBC1D22B,TMEM217	-7286,-7727,-7804
chr14:105649291-105649773	chr14	+	105649346	105649716	True	NM_177533,NM_033271	chr14,chr14	-,+	NUDT14,BTBD6	-1686,65162
chr22:22092900-22093589	chr22	+	22093074	22093632	True	NM_013313,NM_148176	chr22,chr22	-,+	YPEL1,PPIL2	-3003,-72858
chr18:44556539-44557508	chr18	+	44556780	44557346	True	NM_145653,NM_001100817,NM_016427,NM_031303	chr18,chr18,chr18,chr18	-,-,-,+	TCEB3C,TCEB3CL,TCEB3B,KATNAL2	-331,-567,4692,-30050
chr18:44556539-44557508	chr18	+	44550865	44551431	False	NM_145653,NM_001100817,NM_031303	chr18,chr18,chr18	-,-,+	TCEB3C,TCEB3CL,KATNAL2	-331,-567,-24135
chr18:44556539-44557508	chr18	+	44544938	44545504	False	NM_145653,NM_001100817,NM_031303	chr18,chr18,chr18	-,-,+	TCEB3C,TCEB3CL,KATNAL2	5080,-567,-18208
chrX:49969947-49970816	chrX	+	49970107	49970787	True	NM_003886,NM_033031,NM_139289	chrX,chrX,chrX	-,+,-	AKAP4,CCNB3,AKAP4	-4443,56752,-5103
chr16:3934402-3934707	chr16	+	3934535	3934678	True	NM_005223,NM_004380,NM_001079846	chr16,chr16,chr16	+,-,-	DNASE1,CREBBP,CREBBP	-231658,-4414,-4414
chr17:16948341-16948559	chr17	+	16948356	16948604	True	NM_015134,NM_201274,NM_012452	chr17,chr17,chr17	+,+,-	MPRIP,MPRIP,TNFRSF13B	-2300,-2300,-72954
chr16:84220813-84221614	chr16	+	84220817	84221261	True	NM_139174,NM_139353,NM_005679,NM_001145400	chr16,chr16,chr16,chr16	+,-,-,+	ADAD2,TAF1C,TAF1C,ADAD2	3461,-155,-155,3461
chr19:4345135-4345610	chr19	+	4345408	4345654	True	NM_001159846,NM_001013841,NM_032868,NM_017720	chr19,chr19,chr19,chr19	+,-,+,-	MPND,STAP2,MPND,STAP2	-1935,-6561,-1935,-6561
chr1:2463282-2463634	chr1	+	2463283	2463623	True	NM_018216,NM_003820,NM_001010926	chr1,chr1,chr1	-,+,-	PANK4,TNFRSF14,HES5	-5248,24181,-1599
chr4:108853041-108853374	chr4	+	108853069	108853339	True	NM_005443,NM_183075	chr4,chr4	-,+	PAPSS1,CYP2U1	-211650,-403
chr12:49934027-49934772	chr12	+	49934158	49934712	True	NM_012284,NM_001012300	chr12,chr12	+,-	KCNH3,MCRS1	-1269,25560
chr11:71936486-71937474	chr11	+	71936531	71937007	True	NM_001113534,NM_005169,NM_001567,NM_000803,NM_001113535,NM_001113536	chr11,chr11,chr11,chr11,chr11,chr11	+,-,+,+,+,+	FOLR2,PHOX2A,INPPL1,FOLR2,FOLR2,FOLR2	-8763,18263,-700,-8763,-8763,-8763
chr3:158289459-158290699	chr3	+	158289498	158290636	True	NM_001130157,NM_001130156,NM_020169,NM_001195433,NM_001195432,NM_022443,NM_001195434	chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,-,+,+,+,+	MLF1,MLF1,LXN,MLF1,MLF1,MLF1,MLF1	-596,-596,99896,-596,-596,-596,-596
chr6:58284728-58286048	chr6	+	58285003	58285766	True	NM_000947,NR_003660	chr6,chr6	+,-	PRIM2,GUSBP4	-1102632,2008
chr6:58284728-58286048	chr5	-	21461591	21461647	False	NR_027027,NR_027026,NM_004061,NR_027028	chr5,chr5,chr5,chr5	+,+,-,+	GUSBP1,GUSBP1,CDH12,GUSBP1	-2059,-2059,1392140,-2059
chr6:58284728-58286048	chr5	-	37381648	37381705	False	NM_153485,NM_018034	chr5,chr5	-,+	NUP155,WDR70	-10451,-2294
chr12:54367721-54367951	chr12	+	54367795	54367915	True	NM_014212,NR_003716	chr12,chr12	+,-	HOXC11,HOTAIR	-936,-5280
chr17:34987123-34988785	chr17	+	34987171	34988459	True	NM_024864,NM_001033580	chr17,chr17	+,-	MRM1,MYO19	-29197,-95866
chr12:109029092-109030816	chr12	+	109029239	109030479	True	NM_003006,NM_213595	chr12,chr12	-,+	SELPLG,ISCU	-1569,-72996
chr4:10462659-10463042	chr4	+	10462693	10463041	True	NM_000798,NM_053042	chr4,chr4	+,-	DRD5,ZNF518B	-679486,-3661
chr16:30675878-30676120	chr16	+	30675915	30676103	True	NM_138447,NM_001105079	chr16,chr16	-,+	ZNF689,FBRS	-54233,-188
chr17:61973030-61973587	chr17	+	61973151	61973527	True	NM_022641,NM_022640,NR_002947,NM_001317	chr17,chr17,chr17,chr17	-,-,+,-	CSH1,CSH1,TCAM1P,CSH1	544,544,-38826,544
chr17:61973030-61973587	chr17	+	61950255	61950385	False	NM_020991,NM_022645,NM_022644,NM_022557,NM_022556,NR_002947,NM_002059,NM_022558	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,+,-,-	CSH2,CSH2,CSH2,GH2,GH2,TCAM1P,GH2,GH2	754,754,754,8888,8888,-15930,8888,8888
chr4:186875105-186876139	chr4	+	186875256	186876188	True	NM_021069,NM_003265	chr4,chr4	-,+	SORBS2,TLR3	1739,114120
chr22:30473710-30474449	chr22	+	30473871	30474269	True	NM_152510,NM_002309	chr22,chr22	+,-	HORMAD2,LIF	2183,168577
chr17:77020814-77021036	chr17	+	77020901	77021085	True	NM_198594,NM_138793,NM_030968,NM_198593	chr17,chr17,chr17,chr17	+,-,+,+	C1QTNF1,CANT1,C1QTNF1,C1QTNF1	-701,-15002,-701,9386
chr4:9653064-9653899	chr11	-	3484141	3484191	True	NM_007152,NR_024248	chr11,chr11	-,+	ZNF195,LOC650368	-83693,-82001
chr4:9653064-9653899	chr4	+	9653313	9653754	False	NR_031688,NM_000798	chr4,chr4	-,+	MIR548I2,DRD5	-95376,129503
chr4:83352394-83353781	chr4	+	83352447	83353494	True	NR_003249,NM_031372,NM_021204	chr4,chr4,chr4	-,-,+	HNRPDL,HNRPDL,ENOPH1	-1069,-1069,-772
chr3:133969975-133970415	chr3	+	133969979	133970191	True	NM_002958,NM_001042383,NM_001005861	chr3,chr3,chr3	-,+,-	RYK,CEP63,RYK	-393,234383,-393
chr21:30989885-30991167	chr21	+	30989890	30990551	True	NM_175611,NR_033368	chr21,chr21	-,+	GRIK1,NCRNA00258	321794,-21581
chr1:193158242-193158783	chr1	+	193158482	193158826	True	NM_003783,NR_031691	chr1,chr1	-,+	B3GALT2,MIR1278	-2739,-52909
chr9:34381890-34382297	chr9	+	34381944	34382188	True	NM_147168,NM_147169,NM_020702,NM_147173	chr9,chr9,chr9,chr9	-,-,-,+	C9orf24,C9orf24,KIAA1161,NUDT2	-346,-346,-5050,-52491
chr12:50692859-50693458	chr12	+	50693102	50693269	True	NM_016357,NM_001170804	chr12,chr12	-,+	LIMA1,LARP4	-15749,101322
chr1:224313624-224314616	chr1	+	224313714	224314645	True	NR_031574,NM_015176	chr1,chr1	-,+	MIR320B2,FBXO28	130252,-11981
chr19:9546935-9548554	chr19	+	9547095	9548392	True	NM_198058,NM_006631,NM_001172651	chr19,chr19,chr19	-,-,+	ZNF266,ZNF266,ZNF177	-861,-861,-60155
chr9:5448577-5450293	chr9	+	5448641	5450240	True	NM_014143,NM_018465	chr9,chr9	+,-	CD274,C9orf46	262,-10781
chr12:5404566-5405608	chr12	+	5405116	5405634	True	NM_020373,NM_001102654	chr12,chr12	-,+	ANO2,NTF3	649814,135645
chr13:49791628-49792247	chr13	+	49791628	49792150	True	NM_030925,NM_001507	chr13,chr13	-,+	CAB39L,MLNR	183635,2323
chr7:116591423-116592954	chr7	+	116591440	116592963	True	NR_002329,NR_002330,NM_021908,NM_018412	chr7,chr7,chr7,chr7	+,-,+,+	ST7OT4,ST7OT1,ST7,ST7	989,1475,417,417
chr1:151347461-151348007	chr1	+	151347532	151347991	True	NM_002796,NM_003944	chr1,chr1	+,-	PSMB4,SELENBP1	24049,-2368
chr2:31024919-31026809	chr2	+	31025044	31026844	True	NM_144575,NM_001002257	chr2,chr2	-,+	CAPN13,LCLAT1	3517,-354958
chr11:75140986-75141381	chr11	+	75140988	75141368	True	NR_000025,NM_001039548	chr11,chr11	+,-	SNORD15B,KLHL35	-25574,356
chr9:135284150-135285314	chr9	+	135284241	135285347	True	NM_007344,NM_207417	chr9,chr9	-,+	TTF1,C9orf171	-2020,263
chr19:18497557-18497908	chr19	+	18497680	18497950	True	NM_145256,NM_004864,NR_036156	chr19,chr19,chr19	-,+,+	LRRC25,GDF15,MIR3189	10515,-763,-359
chr3:196231341-196232193	chr3	+	196231390	196232114	True	NM_001105573,NM_152617	chr3,chr3	+,-	FBXO45,RNF168	63610,-751
chr1:17445473-17445748	chr1	+	17445482	17445796	True	NM_007365,NM_013358	chr1,chr1	-,+	PADI2,PADI1	202,85824
chr1:150522478-150522717	chr1	+	150522482	150522748	True	NM_019032,NM_001197320,NM_025008,NR_036211	chr1,chr1,chr1,chr1	+,-,+,+	ADAMTSL4,MCL1,ADAMTSL4,MIR4257	-635,29516,-635,1656
chr19:54416251-54417797	chr19	+	54416373	54417844	True	NM_144687,NM_031896	chr19,chr19	-,+	NLRP12,CACNG7	-88725,-433
chr19:34287969-34288272	chr19	+	34288049	34288303	True	NM_001129995,NM_001129994,NM_001166057,NM_024076	chr19,chr19,chr19,chr19	+,+,-,+	KCTD15,KCTD15,PEPD,KCTD15	-349,-349,-275250,-349
chr16:66834384-66834843	chr16	+	66834438	66834744	True	NM_005182,NM_001136505	chr16,chr16	+,-	CA7,CCDC79	43537,829
chr2:171573617-171573879	chr2	+	171573677	171573877	True	NR_027433,NM_001003845	chr2,chr2	-,+	LOC440925,SP5	-2600,-1871
chr11:44927200-44928132	chr11	+	44927247	44928014	True	NR_026681,NM_001076787	chr11,chr11	+,-	LOC221122,TP53I11	67438,44644
chr20:23108377-23108788	chr20	+	23108474	23108786	True	NR_034149,NM_001052	chr20,chr20	-,+	LOC200261,SSTR4	4537,-92468
chr1:9600657-9601131	chr1	+	9600683	9600968	True	NR_027045,NM_032315	chr1,chr1	-,+	C1orf200,SLC25A33	113727,-1213
chr5:54527789-54528247	chr5	+	54527812	54528017	True	NM_021147,NM_001190787,NM_001008397	chr5,chr5,chr5	-,-,+	CCNO,LOC345643,GPX8	1547,-4669,-71879
chr5:140482508-140483698	chr5	+	140482619	140483601	True	NM_018936,NM_018937,NM_031947	chr5,chr5,chr5	+,+,-	PCDHB2,PCDHB3,SLC25A2	-8439,-2442,200070
chr6:43460319-43461394	chr6	+	43460482	43461132	True	NM_001012974,NM_001146017	chr6,chr6	-,+	C6orf154,TJAP1	17342,-3211
chr8:56365932-56366232	chr8	+	56365949	56366219	True	NR_027765,NM_024831	chr8,chr8	-,+	SBF1P1,TGS1	1712,319571
chr3:141051354-141052025	chr3	+	141051445	141052059	True	NM_001178140,NM_001080412	chr3,chr3	-,+	TFDP2,ZBTB38	667220,-8441
chr1:40253521-40253744	chr1	+	40253524	40253764	True	NM_001720,NM_001195007	chr1,chr1	-,+	BMP8B,PPIE	819,-49058
chr1:40253521-40253744	chr1	-	39958112	39958162	False	NR_003929,NM_181809	chr1,chr1	-,+	PPIEL,BMP8A	67258,-845
chr1:78242912-78244459	chr1	+	78243017	78244173	True	NM_201626,NM_198549	chr1,chr1	-,+	USP33,FAM73A	-17480,1135
chr1:84971101-84971420	chr1	+	84971101	84971447	True	NR_036561,NM_005274	chr1,chr1	+,-	SPATA1,GNG5	526,865
chr6:71120752-71122055	chr6	+	71120828	71121855	True	NM_020819,NM_001851,NM_001105531	chr6,chr6,chr6	+,-,+	FAM135A,COL9A1,FAM135A	1251,-108042,1251
chr9:136602515-136602782	chr9	+	136602520	136602790	True	NM_007101,NM_000787,NM_001134707	chr9,chr9,chr9	-,+,-	SARDH,DBH,SARDH	2337,-101086,739
chr22:36566222-36566773	chr22	+	36566277	36566682	True	NM_145641,NM_145640,NM_145642,NM_001136540,NR_027833,NR_027834,NR_027835	chr22,chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,+,-,-,-	APOL3,APOL3,APOL3,APOL1,APOL3,APOL3,APOL3	-4052,-9300,-4052,82434,-9300,-9300,-9300
chr3:42456501-42458485	chr3	+	42456701	42458217	True	NM_004624,NM_144634	chr3,chr3	+,-	VIPR1,LYZL4	85886,-4636
chr17:2209331-2209865	chr17	+	2209617	2209708	True	NM_021947,NM_017575,NM_001170957	chr17,chr17,chr17	+,-,-	SRR,SMG6,SMG6	-2428,-2548,-2804
chr11:107805750-107806191	chr11	+	107805792	107806074	True	NM_017515,NM_017516	chr11,chr11	-,+	SLC35F2,RAB39	-75878,-6566
chr12:64613748-64615600	chr12	+	64613747	64615543	True	NM_007235,NM_152440	chr12,chr12	+,-	XPOT,C12orf66	182609,583
chr11:47867995-47869653	chr11	+	47868110	47869459	True	NM_015231,NM_001098503	chr11,chr11	-,+	NUP160,PTPRJ	648,132650
chr20:44199327-44200890	chr20	+	44199404	44200229	True	NM_080753,NM_181510,NM_130896	chr20,chr20,chr20	+,-,-	WFDC10A,WFDC8,WFDC8	58155,7799,7799
chr21:42219318-42220082	chr21	+	42219337	42219933	True	NM_001389,NR_036167	chr21,chr21	-,+	DSCAM,MIR3197	-298,319550
chr3:172243002-172243477	chr3	+	172243097	172243230	True	NM_018098,NR_033994,NM_003810,NM_001190942,NM_001190943	chr3,chr3,chr3,chr3,chr3	+,-,-,-,-	ECT2,TNFSF10,TNFSF10,TNFSF10,TNFSF10	229067,-1800,-1800,-1800,-1832
chr17:39578644-39578968	chr17	+	39578675	39578833	True	NM_030975,NM_003770	chr17,chr17	+,-	KRTAP9-9,KRT37	-167090,2039
chr11:45306395-45306994	chr11	+	45306394	45306844	True	NM_020826,NM_020229	chr11,chr11	-,+	SYT13,PRDM11	1090,-190881
chr12:97300408-97300801	chr12	+	97300411	97300673	True	NM_002595,NM_152905,NM_001135175,NM_001135176,NM_001135177	chr12,chr12,chr12,chr12,chr12	-,+,+,+,+	CDK17,NEDD1,NEDD1,NEDD1,NEDD1	-506045,327,570,327,327
chr1:150580645-150581191	chr1	+	150581011	150581103	True	NM_207045,NR_036211	chr1,chr1	-,+	ENSA,MIR4257	20568,-56665
chr9:133537739-133537966	chr9	+	133537797	133537871	True	NR_027440,NM_021619	chr9,chr9	-,+	LOC100272217,PRDM12	-82916,2109
chr10:102757640-102758257	chr10	+	102757697	102758264	True	NM_032429,NM_032112	chr10,chr10	+,-	LZTS2,MRPL43	-884,-10425
chr16:2263445-2263849	chr16	+	2263497	2263794	True	NM_004424,NM_001199174,NM_001199175,NM_001199173,NM_182563,NM_022372,NM_001042371	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,-,+,-	E4F1,MLST8,MLST8,MLST8,C16orf79,MLST8,PGP	9772,-7816,-8370,-8370,-2428,-8370,1078
chr22:40440164-40440369	chr22	+	40440163	40440413	True	NM_001024843,NM_152512	chr22,chr22	+,-	TNRC6B,ENTHD1	407,-150369
chr1:38018462-38019258	chr1	+	38018467	38019250	True	NM_024700,NM_003462	chr1,chr1	-,+	SNIP1,DNALI1	703,3269
chr3:52710053-52711519	chr3	+	52710164	52711278	True	NM_018313,NM_018165,NM_181042,NM_014366,NM_206825,NM_206826	chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,+,+,+	PBRM1,PBRM1,PBRM1,GNL3,GNL3,GNL3	8640,2513,2513,8657,8657,8657
chr12:27235996-27237831	chr12	+	27236257	27237737	True	NM_001080406,NM_004264	chr12,chr12	-,+	C12orf71,MED21	-802,-60840
chr12:113658618-113659368	chr12	+	113658712	113659216	True	NM_138451,NM_017901,NM_001143819	chr12,chr12,chr12	-,+,+	IQCD,TPCN1,TPCN1	20,43,43
chr16:68036147-68036832	chr16	+	68036399	68036859	True	NM_017803,NM_022355	chr16,chr16	+,-	DUS2L,DPEP2	20344,-3035
chr11:107274470-107275179	chr11	+	107274518	107275182	True	NM_001130037,NM_152434	chr11,chr11	+,-	ELMOD1,CWF19L2	186634,53440
chr1:149859831-149860096	chr1	+	149859843	149860143	True	NM_175065,NM_003528,NM_003517	chr1,chr1,chr1	-,-,+	HIST2H2AB,HIST2H2BE,HIST2H2AC	-377,-1611,-1369
chr8:16857122-16857651	chr8	+	16857373	16857691	True	NM_181723,NM_019851	chr8,chr8	+,-	EFHA2,FGF20	27055,2033
chr4:83937650-83938188	chr4	+	83937784	83938084	True	NM_194282,NM_001115008,NM_001115007,NM_016129	chr4,chr4,chr4,chr4	-,-,-,+	LIN54,LIN54,LIN54,COPS4	-5802,-5802,-3744,18154
chr8:91323701-91324256	chr8	+	91323724	91324237	True	NM_004929,NM_001359	chr8,chr8	-,+	CALB1,DECR1	-228617,-310203
chr7:99577070-99577534	chr7	+	99577176	99577556	True	NM_001185,NR_036679	chr7,chr7	-,+	AZGP1,AZGP1P1	-3441,828
chr4:65213787-65214283	chr4	+	65214103	65214332	True	NR_034138,NM_001010874	chr4,chr4	+,-	LOC100144602,TECRL	1321346,60897
chr10:46616070-46616940	chr10	+	46616164	46616668	True	NR_027632,NM_001042357,NM_001042389	chr10,chr10,chr10	+,-,-	FAM35B,PTPN20B,PTPN20A	280972,3457,3457
chr10:46616070-46616940	chr10	+	49323604	49323654	False	NR_033172,NM_002750	chr10,chr10	-,+	FRMPD2P1,MAPK8	59636,286032
chr10:46616070-46616940	chr10	+	48803091	48803595	False	NM_001042357,NM_153034,NM_001042389	chr10,chr10,chr10	-,+,-	PTPN20B,ZNF488,PTPN20A	3457,-448053,3457
chr3:148574333-148575309	chr3	+	148574436	148575328	True	NM_001870,NM_003071	chr3,chr3	+,-	CPA3,HLTF	7714,229063
chr1:149885908-149887408	chr1	+	149886209	149887277	True	NM_014849,NM_016074	chr1,chr1	-,+	SV2A,BOLA1	2207,-15113
chrX:118533674-118533901	chrX	+	118533845	118533947	True	NM_145305,NR_028443	chrX,chrX	+,-	SLC25A43,LOC100303728	-638,69186
chr1:43299645-43300094	chr1	+	43299666	43300108	True	NM_018538,NM_199342	chr1,chr1	+,-	ERMAP,CCDC23	-8477,-16607
chr9:138530114-138531218	chr9	+	138530191	138531159	True	NM_001001676,NM_182974	chr9,chr9	+,-	LCN9,GLT6D1	24008,278
chr17:41912772-41913580	chr17	+	41912943	41913595	True	NR_003562,NM_001168324,NM_001932	chr17,chr17,chr17	-,+,-	MPP3,CD300LG,MPP3	-2396,10920,-2396
chr12:56367014-56367294	chr12	+	56367020	56367342	True	NM_001798,NM_002868,NM_001200053,NM_006928,NM_001200054,NM_052827	chr12,chr12,chr12,chr12,chr12,chr12	+,+,-,-,-,+	CDK2,RAB5B,PMEL,PMEL,PMEL,CDK2	-6515,519,-7174,-6524,-7174,-6515
chrX:70321083-70321749	chrX	+	70321226	70321762	True	NM_005938,NM_001170931,NR_033212,NM_000206,NM_001025265	chrX,chrX,chrX,chrX,chrX	+,+,-,-,-	FOXO4,FOXO4,CXorf65,IL2RG,CXorf65	-5278,-5278,4926,9769,4926
chr8:124193815-124194301	chr8	+	124193828	124194216	True	NM_032899,NR_024479,NM_207006	chr8,chr8,chr8	+,-,+	FAM83A,LOC100131726,FAM83A	535,20817,535
chr11:128897561-128899418	chr11	+	128897822	128899346	True	NM_000890,NM_014715	chr11,chr11	+,-	KCNJ5,ARHGAP32	-136560,-3734
chr9:112402342-112402563	chr9	+	112402345	112402595	True	NM_002829,NM_001037293	chr9,chr9	-,+	PTPN3,PALM2	-141752,472
chr14:24046901-24047186	chr14	+	24047051	24047179	True	NM_001146028,NR_023314,NM_032452,NM_003917	chr14,chr14,chr14,chr14	-,+,-,-	JPH4,THTPA,JPH4,AP1G2	880,-21904,880,-9772
chr16:75569690-75569970	chr16	+	75569696	75569858	True	NM_024533,NM_007285	chr16,chr16	-,+	CHST5,GABARAPL2	-628,30390
chrX:13948655-13949461	chrX	+	13948744	13949011	True	NM_001001994,NM_003611	chrX,chrX	-,+	GPM6B,OFD1	7875,-195971
chr11:102981034-102981645	chr11	+	102981172	102981539	True	NM_001377,NM_001080463,NM_032299	chr11,chr11,chr11	+,+,-	DYNC2H1,DYNC2H1,DCUN1D5	-1068,-1068,-18228
chr11:116702171-116702682	chr11	+	116702382	116702726	True	NM_000039,NM_000482,NM_000040	chr11,chr11,chr11	-,-,+	APOA1,APOA4,APOC3	5662,-8371,-1809
chr19:51589295-51589529	chr19	+	51589409	51589555	True	NM_022046,NM_014441	chr19,chr19	-,+	KLK14,SIGLEC9	-1907,38581
chr20:62129213-62129519	chr20	+	62129247	62129537	True	NM_024299,NM_001958	chr20,chr20	+,-	PPDPF,EEF1A2	22595,1018
chr17:39943159-39943421	chr17	+	39943167	39943467	True	NM_002230,NM_021991,NM_021939	chr17,chr17,chr17	-,-,+	JUP,JUP,FKBP10	-203,-203,25494
chr10:70940896-70941390	chr10	+	70940913	70941303	True	NM_001057,NM_003171	chr10,chr10	-,+	TACR2,SUPV3L1	235421,-971
chr9:131875767-131876458	chr9	+	131876070	131876262	True	NM_178003,NM_178001,NM_178000,NM_021131,NR_028048,NM_001193397,NM_000755	chr9,chr9,chr9,chr9,chr9,chr9,chr9	+,+,+,+,-,+,-	PPP2R4,PPP2R4,PPP2R4,PPP2R4,CRAT,PPP2R4,CRAT	-2534,-2534,-2534,-2899,-3000,-2160,-3000
chr22:38240228-38240436	chr22	+	38240283	38240474	True	NM_138797,NR_030395,NM_016091,NR_036556,NR_030396	chr22,chr22,chr22,chr22,chr22	-,-,+,-,-	ANKRD54,MIR658,EIF3L,ANKRD54,MIR659	-44,-19,4895,-44,3357
chr22:46371030-46371304	chr22	+	46371074	46371300	True	NM_058238,NR_027240	chr22,chr22	-,+	WNT7B,LOC730668	1758,31195
chr1:214161386-214161739	chr1	+	214161639	214161733	True	NR_037850,NM_002763	chr1,chr1	-,+	LOC100505832,PROX1	-22031,126
chr1:36790925-36791334	chr1	+	36791024	36791110	True	NM_024676,NM_018166	chr1,chr1	+,-	SH3D21,FAM176B	-18374,-1269
chr6:99395327-99395610	chr6	+	99395371	99395477	True	NM_005604,NM_012160	chr6,chr6	+,-	POU3F2,FBXL4	-112842,422
chr13:29290674-29291895	chr13	+	29290829	29291913	True	NM_181785,NM_001135919,NM_015932	chr13,chr13,chr13	-,-,+	SLC46A3,SLC46A3,POMP	1293,1293,-57739
chr17:28665629-28667439	chr17	+	28665901	28667447	True	NM_206832,NM_001304	chr17,chr17	-,+	TMIGD1,CPD	-4836,38494
chr17:20679863-20680118	chr17	+	20679864	20680130	True	NM_001190790,NM_001004306	chr17,chr17	+,-	CDRT15L2,CCDC144NL	-196880,119375
chr1:22472091-22472503	chr1	+	22472150	22472402	True	NM_030761,NM_001791	chr1,chr1	-,+	WNT4,CDC42	-2631,-93081
chr12:110317137-110317908	chr12	+	110317251	110317925	True	NM_016433,NM_001143852	chr12,chr12	-,+	GLTP,TCHP	418,20153
chr11:1892693-1892939	chr11	+	1892698	1892894	True	NR_036185,NM_001013254,NM_001013255,NM_001013253	chr11,chr11,chr11,chr11	-,+,+,+	MIR4298,LSP1,LSP1,LSP1	-11932,-650,-595,-2846
chr19:19884156-19885768	chr19	+	19884625	19885682	True	NM_021047,NR_026956	chr19,chr19	+,-	ZNF253,LOC284440	91031,1590
chr9:140336365-140337131	chr9	+	140336468	140336901	True	NM_001033113,NM_006647,NM_198585	chr9,chr9,chr9	-,+,-	ENTPD8,NOXA1,ENTPD8	-567,-18672,-567
chr1:185125878-185126165	chr1	+	185125968	185126208	True	NM_017673,NM_030934,NM_001105518,NM_001202423	chr1,chr1,chr1,chr1	+,-,+,-	SWT1,TRMT1L,SWT1,TRMT1L	82,-2,-3,72
chr5:111755929-111757537	chr5	+	111756346	111757437	True	NR_027706,NM_022140	chr5,chr5	+,-	FLJ11235,EPB41L4A	-1119,-1336
chr6:4707799-4709059	chr6	+	4707800	4708976	True	NR_026590,NM_006638	chr6,chr6	+,-	CDYL,RPP40	-1460,295349
chr12:31407355-31407818	chr12	+	31407367	31407577	True	NR_026806,NM_001135811	chr12,chr12	+,-	FLJ13224,FAM60A	69672,71608
chr6:44061173-44062467	chr6	+	44061617	44062489	True	NM_018426,NM_032111	chr6,chr6	+,-	TMEM63B,MRPL14	32886,32752
chr5:52083781-52084133	chr5	+	52083784	52084033	True	NM_004531,NM_015946,NM_181501	chr5,chr5,chr5	-,+,+	MOCS2,PELO,ITGA1	321343,-61,102
chr5:64777358-64777676	chr5	+	64777361	64777678	True	NM_015342,NM_197941	chr5,chr5	+,-	PPWD1,ADAMTS6	81452,76
chr10:38383611-38383983	chr10	+	38383627	38383919	True	NM_003421,NM_001007094,NM_145011,NM_001178101	chr10,chr10,chr10,chr10	+,+,-,+	ZNF37A,ZNF37A,ZNF25,ZNF37A	-414,-414,-118174,-414
chr3:180397523-180397790	chr3	+	180397643	180397779	True	NM_133462,NM_181426	chr3,chr3	+,-	TTC14,CCDC39	-77783,-360
chr9:111877545-111877901	chr9	+	111877642	111877782	True	NM_032012,NM_017832	chr9,chr9	-,+	C9orf5,C9orf6	4501,-181022
chr5:69321683-69321973	chr5	+	69321684	69321998	True	NM_001178087,NM_022968,NR_024054,NM_021967,NM_022978	chr5,chr5,chr5,chr5,chr5	+,+,-,+,+	SERF1B,SERF1A,LOC100170939,SERF1A,SERF1B	-657,-663,199678,-663,-657
chr5:69321683-69321973	chr5	+	70197102	70197416	False	NM_001178087,NM_022968,NM_004536,NM_021967,NM_022978	chr5,chr5,chr5,chr5,chr5	+,+,-,+,+	SERF1B,SERF1A,NAIP,SERF1A,SERF1B	-657,-663,123579,-663,-657
chr17:18906170-18906784	chr17	+	18906177	18906779	True	NM_001039999,NM_152351	chr17,chr17	-,+	FAM83G,SLC5A10	1331,-50750
chr1:1508130-1508388	chr1	+	1508130	1508370	True	NM_001170686,NM_014188	chr1,chr1	+,-	MIB2,SSU72	42424,1953
chr19:750935-751157	chr19	+	750936	751148	True	NM_214710,NM_173481	chr19,chr19	-,+	PRSS57,C19orf21	-55475,1
chr6:26107456-26107685	chr6	+	26107506	26107728	True	NM_003542,NM_005323	chr6,chr6	+,-	HIST1H4C,HIST1H1T	-3382,690
chr13:32603768-32605319	chr13	+	32604139	32605189	True	NM_001136571,NM_023037	chr13,chr13	-,+	ZAR1L,FRY	280952,247
chr1:47656421-47657598	chr1	+	47656436	47657466	True	NM_005764,NM_001010969	chr1,chr1	-,+	PDZK1IP1,CYP4A22	-665,-53380
chr1:113162037-113162365	chr1	+	113162043	113162289	True	NM_006135,NM_138728,NM_138729,NM_017744,NM_138727	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	CAPZA1,ST7L,ST7L,ST7L,ST7L	-19,-3,-3,-3,-3
chr19:9294789-9295825	chr19	+	9295222	9295873	True	NM_175883,NM_001005191	chr19,chr19	+,-	OR7D2,OR7D4	396,29737
chr2:101617696-101618314	chr2	+	101617730	101618362	True	NM_001098577,NM_000993,NM_001099693,NM_001102426	chr2,chr2,chr2,chr2	+,+,+,-	RPL31,RPL31,RPL31,TBC1D8	328,328,328,149534
chr1:150711561-150712901	chr1	+	150711785	150712519	True	NM_001145415,NM_032132	chr1,chr1	+,-	SETDB1,HORMAD1	186295,-18421
chr15:78554450-78556444	chr15	+	78554734	78556270	True	NM_001130182,NM_001130183,NM_015162,NM_018602	chr15,chr15,chr15,chr15	+,+,-,+	DNAJA4,DNAJA4,ACSBG1,DNAJA4	718,2289,-27685,216
chr1:1266883-1267097	chr1	+	1267043	1267145	True	NM_152228,NM_017871,NM_001029885	chr1,chr1,chr1	+,-,+	TAS1R3,CPSF3L,GLTPD1	-368,-6997,-6951
chr9:6645623-6645881	chr4	-	57458621	57458691	False	NM_001145459,NM_206919	chr4,chr4	-,+	HOPX,ARL9	64047,-87297
chr9:6645623-6645881	chr9	+	6645631	6645928	True	NM_000170,NM_001146696	chr9,chr9	-,+	GLDC,KDM4C	11,74934
chr8:37594556-37595192	chr8	+	37594626	37595130	True	NR_003671,NM_007175,NM_001003790,NM_001003791	chr8,chr8,chr8,chr8	-,+,+,+	LOC728024,ERLIN2,ERLIN2,ERLIN2	10484,-580,-478,-580
chr6:100054516-100054964	chr6	+	100054516	100055008	True	NM_005190,NM_021620	chr6,chr6	-,+	CCNC,PRDM13	-37826,19
chr16:74327889-74328850	chr16	+	74327925	74328504	True	NR_026950,NM_002811	chr16,chr16	-,+	LOC283922,PSMD7	73706,2168
chr3:122401298-122401508	chr3	+	122401301	122401494	True	NM_024610,NM_017554	chr3,chr3	-,+	HSPBAP1,PARP14	111207,-1681
chr11:18345688-18346909	chr11	+	18345801	18346923	True	NM_007216,NM_005316,NM_181508,NM_001142307,NM_181507	chr11,chr11,chr11,chr11,chr11	-,+,-,+,-	HPS5,GTF2H1,HPS5,GTF2H1,HPS5	-2080,-2036,-2080,-2036,-2080
chr16:3114699-3115051	chr16	+	3114738	3115092	True	NM_032805,NM_004221,NM_001012718,NM_001012636,NM_001012635,NM_001012634,NM_001012633,NM_001012632,NM_001012631	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	-,+,+,+,+,+,+,+,+	ZSCAN10,IL32,IL32,IL32,IL32,IL32,IL32,IL32,IL32	27819,220,220,692,519,546,220,570,220
chr17:64961070-64961354	chr17	+	64961073	64961177	True	NM_014877,NM_014405	chr17,chr17	-,+	HELZ,CACNG4	280192,-144
chr20:49347708-49348070	chr20	+	49347799	49347919	True	NM_032521,NM_080829	chr20,chr20	+,-	PARD6B,FAM65C	161,-94373
chr2:205407853-205408271	chr2	+	205407853	205408291	True	NM_057177,NM_203365,NM_152526,NM_205863	chr2,chr2,chr2,chr2	+,-,+,+	PARD3B,RAPH1,PARD3B,PARD3B	2224,-1007795,2224,2224
chr1:21505766-21507203	chr1	+	21505812	21506238	True	NM_001198801,NM_001198803,NM_001198802,NM_032264	chr1,chr1,chr1,chr1	-,-,-,+	EIF4G3,EIF4G3,EIF4G3,NBPF3	-2431,-4561,-2431,260392
chr12:55420516-55420841	chr12	+	55420531	55420841	True	NM_001136030,NM_021191	chr12,chr12	-,+	KIAA0748,NEUROD4	-42075,-6853
chr3:194989014-194989871	chr3	+	194989433	194989915	True	NR_003265,NM_152531	chr3,chr3	+,-	SDHAP2,C3orf21	394994,2030
chr11:63871853-63872586	chr11	+	63871910	63872626	True	NM_013280,NM_014067	chr11,chr11	+,-	FLRT1,MACROD1	-599,61009
chr16:81811898-81812551	chr16	+	81811978	81812409	True	NM_002661,NM_145168	chr16,chr16	+,-	PLCG2,SDR42E1	520,232741
chr17:3497567-3497940	chr17	+	3497566	3497986	True	NM_080705,NM_080706,NM_018727,NM_001031681	chr17,chr17,chr17,chr17	-,-,-,+	TRPV1,TRPV1,TRPV1,CTNS	1189,-1395,2400,41775
chr3:101395734-101395997	chr3	+	101395738	101395988	True	NM_000986,NR_024407,NM_014415	chr3,chr3,chr3	-,+,-	RPL24,LOC100009676,ZBTB11	9625,-515,50
chr2:70313311-70313605	chr2	+	70313353	70313615	True	NM_006196,NR_033872	chr2,chr2	+,-	PCBP1,LOC400960	969,582
chr1:197882431-197882699	chr1	+	197882432	197882744	True	NM_001014434,NM_001195216,NM_020204	chr1,chr1,chr1	+,-,+	LHX9,DENND1B,LHX9	-848,-137809,3772
chr10:103825983-103826312	chr10	+	103826089	103826311	True	NM_024747,NM_024541	chr10,chr10	+,-	HPS6,C10orf76	-1016,-10157
chr5:172409311-172410439	chr5	+	172409756	172410151	True	NR_026682,NM_003945	chr5,chr5	-,+	LOC100268168,ATP6V0E1	-23385,611
chr2:149436237-149437967	chr2	+	149436818	149437994	True	NM_181742,NM_015630	chr2,chr2	-,+	ORC4,EPC2	-657645,-34315
chr9:42800113-42800549	chr9	+	42800241	42800291	True	NR_026759,NR_026558	chr9,chr9	-,+	FAM95B1,AQP7P3	233071,57860
chr9:42800113-42800549	chr9	-	70346330	70346380	False	NM_201453,NM_001099279	chr9,chr9	+,-	CBWD3,FOXD4L2	510458,83401
chr17:80417298-80417667	chr17	+	80417408	80417468	True	NR_036519,NM_012336,NM_001038618,NM_001193657,NR_036516,NM_001193653,NM_031968,NM_001033046,NM_001100408,NR_036514,NR_036517,NM_001193654,NM_001083608,NR_036518,NM_001100407,NM_001193655	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,+,-,-,-,+,-,-,-,-,-,+,-,-,-	C17orf62,NARF,NARF,C17orf62,C17orf62,C17orf62,NARF,C17orf62,C17orf62,C17orf62,C17orf62,C17orf62,NARF,C17orf62,C17orf62,C17orf62	-8701,-920,-1400,-8701,-8701,-8701,-920,-8701,-8701,-8701,-8701,-8701,-920,-8701,-8701,-9806
chr10:101548525-101548855	chr10	+	101548535	101548877	True	NM_000392,NM_078470	chr10,chr10	+,-	ABCC2,COX15	-6123,-56112
chr7:994531-994874	chr7	+	994541	994763	True	NM_006869,NM_017781	chr7,chr7	-,+	ADAP1,CYP2W1	-252,28071
chr10:3111567-3113524	chr10	+	3112025	3113439	True	NM_002627,NM_014889	chr10,chr10	+,-	PFKP,PITRM1	-2324,101614
chr6:91005251-91005604	chr6	+	91005473	91005547	True	NM_021813,NM_032602,NM_001170794	chr6,chr6,chr6	-,+,-	BACH2,GJA10,BACH2	1065,-401336,1130
chr20:3388951-3389327	chr20	+	3388983	3389374	True	NM_001009984,NM_139322	chr20,chr20	-,+	C20orf194,ATRN	-728,62290
chr6:4021966-4022317	chr6	+	4022140	4022293	True	NM_173563,NM_003913	chr6,chr6	-,+	C6orf146,PRPF4B	57215,-622
chr20:1977562-1978292	chr20	+	1977689	1978335	True	NM_001190900,NM_001190892,NM_001040023,NM_024411,NM_001190898,NM_001190899	chr20,chr20,chr20,chr20,chr20,chr20	-,-,+,-,-,-	PDYN,PDYN,SIRPA,PDYN,PDYN,PDYN	-3295,-4237,-101914,-2758,-2758,-2758
chr19:17374597-17374864	chr19	+	17374678	17374838	True	NM_001033549,NM_031941,NM_014173	chr19,chr19,chr19	+,-,+	BABAM1,USHBP1,BABAM1	3393,756,3393
chr2:62135853-62137675	chr2	+	62136372	62137236	True	NM_006430,NM_152516	chr2,chr2	-,+	CCT4,COMMD1	-20581,-3630
chr17:56082940-56084109	chr17	+	56082958	56083880	True	NR_034041,NM_001078166,NM_006924,NM_080677	chr17,chr17,chr17,chr17	-,-,-,+	SRSF1,SRSF1,SRSF1,DYNLL2	877,877,877,76899
chr13:114322491-114322736	chr13	+	114322496	114322778	True	NM_000705,NM_002929	chr13,chr13	-,+	ATP4B,GRK1	-9983,-950
chr7:126861508-126862384	chr7	+	126861513	126862047	True	NM_000845,NM_001662	chr7,chr7	-,+	GRM8,ARF5	21572,366358
chr9:79055420-79055701	chr9	+	79055575	79055669	True	NM_001097634,NM_018339	chr9,chr9	+,-	GCNT1,RFK	912,-46131
chr16:16326077-16326432	chr16	+	16326137	16326353	True	NM_001171,NM_001079528,NM_001004067	chr16,chr16,chr16	-,-,+	ABCC6,ABCC6,NOMO3	-8809,-8809,35
chr16:16326077-16326432	chr16	+	14927391	14927539	False	NR_023387,NM_014287	chr16,chr16	-,+	ABCC6P2,NOMO1	-8832,103
chr16:16326077-16326432	chr16	-	18573531	18573679	False	NM_001004060,NM_173614,NR_003569	chr16,chr16,chr16	-,-,+	NOMO2,NOMO2,ABCC6P1	-97,-97,8890
chr10:5723304-5724722	chr10	+	5723669	5724764	True	NM_017782,NR_037164	chr10,chr10	+,-	C10orf18,ASB13	2036,-15111
chr3:139013847-139014955	chr3	+	139013856	139014776	True	NR_027070,NM_020191	chr3,chr3	-,+	PISRT1,MRPS22	-61492,48084
chr10:15395027-15395664	chr10	+	15395103	15395665	True	NM_183005,NM_001010924	chr10,chr10	+,-	RPP38,FAM171A1	-255980,17443
chr11:130317654-130318317	chr11	+	130317878	130318334	True	NM_007037,NM_139055	chr11,chr11	-,+	ADAMTS8,ADAMTS15	-19339,534
chr8:37278991-37280886	chr8	+	37279155	37280421	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	272879,325193
chr6:10749416-10751410	chr6	+	10749493	10751368	True	NM_030969,NR_026736,NM_001127711	chr6,chr6,chr6	+,-,+	TMEM14B,C6orf52,TMEM14B	-1549,-54463,-1549
chr4:81183284-81184452	chr4	+	81183300	81184407	True	NM_001145794,NM_004464,NM_033143	chr4,chr4,chr4	-,+,+	ANTXR2,FGF5,FGF5	-188823,3334,3334
chr8:27111593-27112880	chr8	+	27111610	27112925	True	NM_173174,NM_030795	chr8,chr8	+,-	PTK2B,STMN4	56073,3036
chr5:1112462-1112936	chr5	+	1112794	1112984	True	NM_001003841,NM_006598	chr5,chr5	+,-	SLC6A19,SLC12A7	88725,-622
chr19:54341128-54342696	chr19	+	54341314	54341943	True	NM_001020820,NM_144687	chr19,chr19	+,-	MYADM,NLRP12	27667,-13666
chr3:42846380-42846894	chr3	+	42846540	42846838	True	NM_001296,NM_001099669,NM_001099668,NM_014056	chr3,chr3,chr3,chr3	+,-,-,-	CCBP2,HIGD1A,HIGD1A,HIGD1A	4125,-513,-606,-513
chr22:29838066-29838621	chr22	+	29838145	29838209	True	NR_002727,NM_021026	chr22,chr22	-,+	RFPL1S,RFPL1	-27,-3624
chr6:135502990-135503380	chr6	+	135503039	135503337	True	NM_001161658,NM_001161659,NM_001161660,NM_001130173,NM_001130172,NM_001161656,NM_001161657,NM_001145207,NM_005375	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	+,+,+,+,+,+,+,-,+	MYB,MYB,MYB,MYB,MYB,MYB,MYB,HBS1L,MYB	-637,-637,-637,-637,-637,-637,-637,-127003,-637
chr4:189268619-189270168	chr4	+	189268897	189269999	True	NM_173553,NR_033869	chr4,chr4	-,+	TRIML2,LOC401164	-242489,106732
chr17:6938011-6939257	chr17	+	6938142	6938950	True	NM_153357,NM_201566	chr17,chr17	-,+	SLC16A11,SLC16A13	8342,443
chr19:1268572-1268902	chr19	+	1268614	1268922	True	NR_027271,NM_017914,NR_023313,NM_001280,NR_023312	chr19,chr19,chr19,chr19,chr19	-,+,+,+,+	C19orf23,C19orf24,CIRBP,CIRBP,CIRBP	1387,6597,344,344,344
chr15:71247354-71249241	chr15	+	71247684	71249234	True	NM_001199018,NM_020147	chr15,chr15	+,-	LRRC49,THAP10	-62716,-62912
chr5:177538591-177539860	chr5	+	177538820	177539872	True	NM_015111,NM_001034833	chr5,chr5	+,-	N4BP3,NHP2	683,41147
chr3:44041414-44041857	chr3	+	44041419	44041852	True	NM_001204834,NR_029700	chr3,chr3	-,+	ANO10,MIR138-1	-377859,113851
chr5:49736289-49736784	chr5	+	49736423	49736741	True	NM_198449,NM_001178055	chr5,chr5	-,+	EMB,PARP8	543,224991
chr22:30991379-30991787	chr22	+	30991544	30991788	True	NM_000355,NM_014303	chr22,chr22	+,-	TCN2,PES1	11281,-3650
chr17:73009167-73009442	chr17	+	73009193	73009491	True	NM_001545,NM_001003785	chr17,chr17	+,-	ICT1,ATP5H	-464,33633
chr18:3372951-3373439	chr18	+	3373005	3373473	True	NM_019856,NM_174886	chr18,chr18	-,+	MYOM1,TGIF1	-152899,38598
chr16:772263-772504	chr16	+	772389	772457	True	NM_001031737,NM_023933,NM_032304,NM_024042	chr16,chr16,chr16,chr16	-,+,+,+	CCDC78,FAM173A,HAGHL,METRN	4066,-1282,4808,-7267
chr5:150458486-150458754	chr5	+	150458584	150458752	True	NM_002084,NM_006058	chr5,chr5	+,-	GPX3,TNIP1	-58636,2295
chr19:37327869-37328315	chr19	+	37327922	37328350	True	NM_003419,NM_206894	chr19,chr19	+,-	ZNF345,ZNF790	12916,984
chr9:131547415-131548177	chr9	+	131547809	131547953	True	NM_018201,NM_006336	chr9,chr9	+,-	TBC1D13,ZER1	1556,-13611
chr20:61274693-61275022	chr20	+	61274770	61275044	True	NM_016354,NR_024470	chr20,chr20	+,-	SLCO4A1,LOC100127888	-1024,22979
chr7:96318959-96320326	chr7	+	96319115	96320035	True	NM_005222,NM_006304	chr7,chr7	+,-	DLX6,SHFM1	315254,19224
chr4:100009583-100009886	chr4	+	100009621	100009875	True	NM_000671,NR_037884	chr4,chr4	-,+	ADH5,LOC100507053	106,132
chr1:59250319-59250573	chr1	+	59250429	59250561	True	NM_002228,NR_034014,NR_034015	chr1,chr1,chr1	-,+,+	JUN,LOC100131060,LOC100131060	-644,261,261
chr1:12123860-12124241	chr1	+	12123954	12124150	True	NM_001243,NM_138346	chr1,chr1	+,-	TNFRSF8,KIAA2013	-571,-137469
chr10:43916034-43916241	chr10	+	43916054	43916240	True	NR_026693,NM_001098204	chr10,chr10	+,-	ZNF487P,HNRNPF	16333,-11358
chr3:108479988-108481295	chr3	+	108479991	108481327	True	NM_016388,NM_032579	chr3,chr3	+,-	TRAT1,RETNLB	60303,-3861
chr12:65673179-65674361	chr12	+	65673415	65674420	True	NM_007191,NM_001031679,NM_198080,NM_001193460,NM_001193461	chr12,chr12,chr12,chr12,chr12	-,+,+,+,+	WIF1,MSRB3,MSRB3,MSRB3,MSRB3	-158069,-1045,-1045,-1045,-701
chr22:42228887-42229123	chr22	+	42228927	42229159	True	NM_004599,NM_052945	chr22,chr22	+,-	SREBF2,TNFRSF13C	-54,93712
chr19:37569546-37570818	chr19	+	37569644	37570485	True	NM_144689,NM_199126	chr19,chr19	+,-	ZNF420,ZNF585A	-313,92898
chr19:19630014-19630313	chr19	+	19630041	19630301	True	NM_032037,NM_001190328,NM_198537,NM_015965	chr19,chr19,chr19,chr19	-,+,+,+	TSSK6,YJEFN3,YJEFN3,NDUFA13	-3572,9368,9368,-3073
chr9:112888910-112889587	chr9	+	112888930	112889606	True	NM_001136562,NM_001012993	chr9,chr9	+,-	AKAP2,C9orf152	-1200,80857
chr2:180427253-180428694	chr2	+	180427268	180428327	True	NM_001113398,NM_019091	chr2,chr2	-,+	ZNF385B,PLEKHA3	37,-1082131
chr15:100272773-100273087	chr15	+	100272773	100272953	True	NM_001130928,NM_152449	chr15,chr15	+,-	MEF2A,LYSMD4	-99641,723
chr5:72704955-72705908	chr5	+	72704958	72705913	True	NM_004472,NM_001037637	chr5,chr5	-,+	FOXD1,BTF3	38489,88336
chr20:40220254-40221406	chr20	+	40220343	40221355	True	NM_032221,NM_022896	chr20,chr20	-,+	CHD6,LPIN3	25835,-250838
chr19:37096473-37097833	chr19	+	37096644	37097619	True	NM_001145649,NM_032825,NM_001145650,NR_027239	chr19,chr19,chr19,chr19	-,+,-,-	ZNF529,ZNF382,ZNF529,ZNF529	-466,-474,-466,-466
chr18:66383161-66383423	chr18	+	66383160	66383458	True	NM_019022,NM_001093729	chr18,chr18	-,+	TMX3,CCDC102B	-807,-723
chr15:48014142-48015235	chr15	+	48014200	48015083	True	NM_016132,NM_024966,NM_153617,NM_153616,NM_153619,NM_153618,NM_020858	chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,+,+,+,+,+,+	MYEF2,SEMA6D,SEMA6D,SEMA6D,SEMA6D,SEMA6D,SEMA6D	455537,-3566,-3566,-3566,-3566,-3566,-3566
chr2:242129452-242129709	chr2	+	242129475	242129629	True	NM_015148,NM_001001666,NM_001001891	chr2,chr2,chr2	-,+,+	PASK,ANO7,ANO7	-40597,-1602,-1602
chr12:10878084-10878788	chr12	+	10878260	10878791	True	NM_003651,NM_001145426,NM_005042	chr12,chr12,chr12	-,-,+	CSDA,CSDA,PRH2	-2307,-2307,203042
chr6:20405803-20407369	chr6	+	20406240	20407411	True	NM_001949,NM_001080480	chr6,chr6	+,-	E2F3,MBOAT1	-4155,-193570
chr15:64995422-64995693	chr15	+	64995656	64995740	True	NM_001195059,NM_002537	chr15,chr15	+,-	PLEKHO2,OAZ2	138341,-194
chr4:189057942-189058790	chr4	+	189058000	189058292	True	NM_173553,NM_178556	chr4,chr4	-,+	TRIML2,TRIML1	-31592,2305
chr5:37242848-37244245	chr5	+	37243110	37244292	True	NM_018034,NM_023073	chr5,chr5	+,-	WDR70,C5orf42	135119,5292
chr3:99977700-99978542	chr3	+	99977914	99978552	True	NM_018309,NM_014820,NM_001199198	chr3,chr3,chr3	+,-,+	TBC1D23,TOMM70A,TBC1D23	1133,141723,1133
chr15:60885473-60887431	chr15	+	60885489	60887380	True	NM_134262,NM_012182	chr15,chr15	-,+	RORA,FOXB1	-782,-589119
chr5:90646707-90648406	chr5	+	90646752	90648161	True	NM_020801,NR_027435	chr5,chr5	-,+	ARRDC3,LOC100129716	31038,28002
chr12:5479570-5480720	chr12	+	5479662	5480612	True	NM_020373,NM_001102654	chr12,chr12	-,+	ANO2,NTF3	574836,60667
chr7:77167376-77167753	chr7	+	77167417	77167591	True	NM_001131008,NM_001131009,NM_017439,NM_002835	chr7,chr7,chr7,chr7	+,+,-,+	PTPN12,PTPN12,PION,PTPN12	-116,-116,-121700,-695
chr7:62766977-62767183	chr7	+	62767079	62767223	True	NR_028348,NR_003952	chr7,chr7	+,-	LOC100287704,LOC643955	42224,-2645
chr7:62766977-62767183	chr7	-	62901720	62901864	False	NR_028349	chr7	-	LOC100287834	-42301
chr4:17511301-17511919	chr4	+	17511373	17511886	True	NM_000320,NM_001079827	chr4,chr4	-,+	QDPR,CLRN2	2022,4901
chr1:149760871-149761325	chr1	+	149761047	149761251	True	NM_001161334,NM_000566	chr1,chr1	-,+	HIST2H2BF,FCGR1A	22727,-6848
chr1:32705212-32705697	chr1	+	32705212	32705720	True	NM_032648,NR_026850	chr1,chr1	+,-	FAM167B,MTMR9LP	7097,1641
chr12:117176318-117176788	chr12	+	117176396	117176633	True	NM_001109903,NM_032814,NM_024738	chr12,chr12,chr12	+,+,-	RNFT2,RNFT2,C12orf49	-351,-351,-553
chr1:28416390-28417248	chr1	+	28416751	28416945	True	NR_027268,NM_018053,NM_001990	chr1,chr1,chr1	-,+,-	LOC653566,XKR8,EYA3	6174,-130307,-1603
chr12:370080-370812	chr12	+	370127	370758	True	NM_016615,NM_001190997,NM_001130147,NR_034028	chr12,chr12,chr12,chr12	-,-,+,-	SLC6A13,SLC6A13,CCDC77,SLC6A13	1338,1338,127757,1338
chr15:100346938-100347143	chr15	+	100346941	100347019	True	NR_003260,NM_001130928	chr15,chr15	-,+	DNM1P46,MEF2A	163,-173809
chr15:100346938-100347143	chr15	-	102286121	102286199	False	NM_152334,NM_001005326	chr15,chr15	-,+	TARSL2,OR4F6	-21476,59723
chr16:2099747-2100435	chr16	+	2100243	2100473	True	NM_000548,NM_001077183,NM_001114382,NM_002528	chr16,chr16,chr16,chr16	+,+,+,-	TSC2,TSC2,TSC2,NTHL1	-2304,-2304,-2304,-2376
chr3:128365546-128366956	chr3	+	128365884	128366797	True	NM_004637,NM_002950	chr3,chr3	+,-	RAB7A,RPN1	78181,2972
chr11:108463614-108463842	chr11	+	108463653	108463729	True	NM_015065,NM_004398	chr11,chr11	-,+	EXPH5,DDX10	695,72086
chr2:198649615-198650206	chr2	+	198649617	198649913	True	NM_033030,NM_006226,NM_197970	chr2,chr2,chr2	-,+,-	BOLL,PLCL1,BOLL	211,19512,1075
chr10:32620202-32622122	chr10	+	32620708	32621832	True	NM_025209,NM_001026383	chr10,chr10	-,+	EPC1,CCDC7	14337,113208
chr3:43139018-43139435	chr3	+	43139276	43139404	True	NM_001129908,NM_032806	chr3,chr3	+,-	FAM198A,C3orf39	-118575,8211
chrY:59213071-59213859	chrY	+	59213274	59213882	True	NM_005638,NR_033714,NR_033715,NM_001185183,NR_002179,NM_001145149	chrY,chrY,chrY,chrY,chrY,chrY	+,+,+,+,-,+	VAMP7,VAMP7,VAMP7,VAMP7,TTTY17C,VAMP7	66,66,66,66,-31882354,66
chrY:59213071-59213859	chrX	+	155110268	155110876	False	NM_005638,NR_033714,NR_033715,NM_018196,NM_001185183,NM_001145149	chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,-,+,+	VAMP7,VAMP7,VAMP7,TMLHE,VAMP7,VAMP7	66,66,66,-267646,66,66
chr5:129254774-129255365	chr5	+	129254930	129255100	True	NR_024611,NM_175856	chr5,chr5	-,+	HINT1,CHSY3	1245988,-14470
chr11:44585307-44586636	chr11	+	44585329	44586473	True	NM_021926,NM_002231,NM_001024844	chr11,chr11,chr11	-,+,+	ALX4,CD82,CD82	-253613,667,667
chr6:44126920-44127516	chr6	+	44126953	44127341	True	NM_007058,NM_032111	chr6,chr6	+,-	CAPN11,MRPL14	-458,-31762
chr4:164502247-164502679	chr4	+	164502293	164502647	True	NM_017923,NM_018352	chr4,chr4	-,+	MARCH1,C4orf43	32179,-86671
chrX:109245620-109245938	chrX	+	109245651	109245981	True	NM_032227,NM_017698,NR_004379	chrX,chrX,chrX	+,+,-	TMEM164,TMEM164,SNORD96B	360,91,222357
chr11:18268574-18270322	chr11	+	18268668	18270370	True	NM_001127380,NM_001199744,NM_030754,NM_000331	chr11,chr11,chr11,chr11	-,-,-,+	SAA2,SAA2-SAA4,SAA2,SAA1	25,25,25,17437
chr11:18268574-18270322	chr11	-	18288326	18289162	False	NM_000331,NM_001178006,NM_199161,NM_030754	chr11,chr11,chr11,chr11	+,+,+,-	SAA1,SAA1,SAA1,SAA2	-571,-571,-571,-18105
chr8:106357403-106358334	chr8	+	106357466	106358350	True	NM_013437,NM_012082	chr8,chr8	-,+	LRP12,ZFPM2	-756214,-26379
chr13:47369980-47370384	chr13	+	47370180	47370362	True	NM_001164213,NM_001984	chr13,chr13	+,-	LRCH1,ESD	-242944,1055
chr1:40350227-40350469	chr1	+	40350330	40350481	True	NM_001136493,NM_017646	chr1,chr1	+,-	MFSD2A,TRIT1	70302,-1153
chr10:6354710-6355408	chr10	+	6354723	6355369	True	NM_004566,NM_000417	chr10,chr10	+,-	PFKFB3,IL2RA	-109934,-250390
chr15:85253722-85254223	chr15	+	85253984	85254070	True	NM_014630,NM_014300	chr15,chr15	+,-	ZNF592,SEC11A	37747,5656
chrX:39646035-39646812	chrX	+	39646094	39646778	True	NM_005765,NM_001123385	chrX,chrX	+,-	ATP6AP2,BCOR	793437,309991
chr4:6989534-6989788	chr4	+	6989536	6989780	True	NM_153376,NM_001113363	chr4,chr4	-,+	CCDC96,TBC1D14	54998,-704
chr15:89918120-89918867	chr15	+	89918194	89918899	True	NR_029692,NR_015411,NM_002693	chr15,chr15,chr15	+,+,-	MIR9-3,LOC254559,POLG	-6997,2373,-40168
chr7:100485738-100486775	chr7	+	100485834	100486672	True	NM_000665,NM_015908,NM_015831,NM_001015072	chr7,chr7,chr7,chr7	-,+,-,-	ACHE,SRRT,ACHE,UFSP1	6919,-13185,6919,717
chr6:152126743-152128513	chr6	+	152126994	152128434	True	NM_017909,NM_000125,NM_001122741,NM_001122740	chr6,chr6,chr6,chr6	-,+,+,+	RMND1,ESR1,ESR1,ESR1	-353678,379,-237,19
chr11:65655076-65655343	chr11	+	65655083	65655385	True	NM_198897,NM_004214,NM_006848,NM_001335	chr11,chr11,chr11,chr11	-,-,+,+	FIBP,FIBP,CCDC85B,CTSW	675,675,2489,-7850
chr3:58568324-58568616	chr3	+	58568331	58568525	True	NM_001076778,NM_007177,NM_153331	chr3,chr3,chr3	-,-,+	FAM107A,FAM107A,KCTD6	-4840,-4840,-84290
chr20:45092958-45094448	chr20	+	45092963	45093735	True	NR_026640,NM_030777	chr20,chr20	-,+	MKRN7P,SLC2A10	246,244543
chr19:42498206-42498660	chr19	+	42498287	42498397	True	NM_152296,NM_022752	chr19,chr19	-,+	ATP1A3,ZNF574	35,81892
chr20:32704179-32705758	chr20	+	32704237	32705355	True	NM_016732,NM_003908	chr20,chr20	+,-	RALY,EIF2S2	-122556,-4152
chr18:43305899-43307343	chr18	+	43306085	43307282	True	NM_015865,NM_001146037,NM_001146036,NM_020964,NM_001128588	chr18,chr18,chr18,chr18,chr18	+,+,+,-,+	SLC14A1,SLC14A1,SLC14A1,EPG5,SLC14A1	-2044,-19,-2044,240073,-2044
chr6:150326231-150326490	chr6	+	150326327	150326395	True	NR_024045,NM_025218	chr6,chr6	-,+	RAET1K,ULBP1	-47,-41235
chr8:29387769-29389677	chr8	+	29387827	29389614	True	NR_024473,NM_001394	chr8,chr8	+,-	LOC286135,DUSP4	389414,-179560
chr3:195281470-195282505	chr3	+	195281528	195282453	True	NR_003265,NM_006241	chr3,chr3	+,-	SDHAP2,PPP1R2	102456,-11304
chr6:14888057-14888409	chr6	+	14888231	14888419	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	358107,774920
chr19:51013740-51014179	chr19	+	51013865	51014119	True	NM_138334,NM_001024656,NM_001114598,NM_206538	chr19,chr19,chr19,chr19	-,-,-,+	JOSD2,ASPDH,ASPDH,C19orf63	276,3878,3073,-34180
chr18:43195055-43196782	chr18	+	43195680	43196686	True	NM_007163,NM_020964	chr18,chr18	+,-	SLC14A2,EPG5	-965,350669
chr2:207570115-207572062	chr2	+	207570170	207571769	True	NM_001093730,NM_001136193	chr2,chr2	-,+	DYTN,FASTKD2	11401,58342
chr14:105072666-105073946	chr14	+	105072985	105073887	True	NM_207379,NM_001008404	chr14,chr14	-,+	TMEM179,C14orf180	-1888,-26980
chr15:76280617-76281243	chr15	+	76280885	76281167	True	NM_138573,NM_152335	chr15,chr15	-,+	NRG4,C15orf27	23672,71131
chr21:44072936-44073217	chr21	+	44072935	44073107	True	NM_001001585,NM_001001584,NM_001001574,NM_080860,NM_002606,NM_001001578,NM_001001579,NM_001001569,NM_001001568,NM_001001581,NM_001001580,NM_001001583,NM_001001582,NM_001001570,NM_001001571,NM_001001572,NM_001001573,NM_001001567,NM_001001575,NM_001001576,NM_001001577	chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21	+,+,+,-,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+	PDE9A,PDE9A,PDE9A,RSPH1,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A	754,754,754,-156534,754,754,754,754,754,754,754,754,754,754,754,754,754,754,754,754,754
chr10:5407559-5408680	chr10	+	5407686	5408699	True	NM_001171864,NM_053049	chr10,chr10	-,+	TUBAL3,UCN3	38144,-761
chr16:31521153-31521581	chr16	+	31521223	31521468	True	NM_022744,NM_016633	chr16,chr16	-,+	C16orf58,AHSP	-1517,17734
chr17:46651820-46653292	chr17	+	46652023	46653119	True	NM_024015,NR_029608,NM_002146,NR_033201	chr17,chr17,chr17,chr17	-,-,-,+	HOXB4,MIR10A,HOXB3,LOC404266	2682,4248,-213,14703
chr19:39928377-39928592	chr19	+	39928422	39928548	True	NM_001111020,NM_003169,NM_001130825,NM_001130824,NM_001020	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	SUPT5H,SUPT5H,SUPT5H,SUPT5H,RPS16	7637,7739,7637,7637,-1804
chr16:14397990-14398526	chr16	+	14398040	14398412	True	NR_029854,NM_001134477,NR_030177	chr16,chr16,chr16	+,-,+	MIR365-1,PARN,MIR193B	4729,325766,-269
chr6:160114934-160115450	chr6	+	160115048	160115470	True	NM_001024466,NM_001024465,NM_152858,NM_000636	chr6,chr6,chr6,chr6	-,-,+,-	SOD2,SOD2,WTAP,SOD2	-695,-695,32681,-695
chr8:18041011-18041540	chr8	+	18041012	18041406	True	NM_004315,NM_001160179	chr8,chr8	-,+	ASAH1,NAT1	-98505,-13097
chr3:179171203-179173107	chr3	+	179171236	179172990	True	NM_033540,NM_021629	chr3,chr3	+,-	MFN1,GNB4	-105809,-1865
chr11:61158110-61158680	chr11	+	61158280	61158622	True	NM_001173990,NM_001173991,NM_153611,NM_016499	chr11,chr11,chr11,chr11	+,+,-,+	TMEM216,TMEM216,CYBASC3,TMEM216	1209,1209,-28525,1242
chr11:47449184-47449975	chr11	+	47449444	47449810	True	NM_002804,NM_152264	chr11,chr11	-,+	PSMC3,SLC39A13	-1420,-19449
chr1:71513026-71513245	chr1	+	71513030	71513222	True	NR_028294,NR_028293,NR_028292,NM_001126044,NM_153742,NM_198719,NM_198718,NM_198715,NM_198714,NM_198717,NM_198716	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,+,-,-,-,-,-,-	PTGER3,PTGER3,PTGER3,PTGER3,CTH,PTGER3,PTGER3,PTGER3,PTGER3,PTGER3,PTGER3	319,319,319,319,-636180,319,319,319,319,319,319
chr1:155579127-155579655	chr1	+	155579446	155579596	True	NM_018116,NM_018489	chr1,chr1	+,-	MSTO1,ASH1L	410,-47122
chr17:4404282-4404786	chr17	+	4404329	4404820	True	NM_001124758,NM_001105538	chr17,chr17	+,-	SPNS2,MYBBP1A	-2251,53911
chr2:86664007-86664557	chr2	+	86664007	86664262	True	NM_018433,NM_001146688,NM_001164730	chr2,chr2,chr2	+,+,-	KDM3A,KDM3A,REEP1	4008,4321,-98801
chr6:167741550-167742914	chr6	+	167741763	167742947	True	NM_004610,NM_031949	chr6,chr6	-,+	TCP10,TTLL2	55101,-3240
chr7:3349422-3349705	chr7	+	3349463	3349721	True	NM_152744,NM_032415	chr7,chr7	+,-	SDK1,CARD11	-8441,-265954
chr12:55368585-55369803	chr12	+	55368862	55369804	True	NM_001098815,NM_001136030,NM_021191	chr12,chr12,chr12	-,-,+	KIAA0748,KIAA0748,NEUROD4	5868,8702,43924
chr9:101570190-101570392	chr9	+	101570262	101570330	True	NM_173551,NM_024642	chr9,chr9	-,+	ANKS6,GALNT12	-11468,-332
chr8:141519855-141520651	chr8	+	141519869	141520599	True	NR_023360,NM_031466,NM_017444	chr8,chr8,chr8	+,-,+	CHRAC1,TRAPPC9,CHRAC1	815,-51191,801
chr15:64792305-64792879	chr15	+	64792322	64792898	True	NM_015042,NM_014736	chr15,chr15	+,-	ZNF609,KIAA0101	-754,-118620
chr2:71016722-71017284	chr2	+	71016811	71017258	True	NM_001004311,NM_012476	chr2,chr2	-,+	FIGLA,VAX2	567,110461
chr1:33819420-33820629	chr1	+	33819705	33820479	True	NM_004427,NM_152493	chr1,chr1	-,+	PHC2,ZNF362	-4206,-97582
chr9:133712134-133712827	chr9	+	133712238	133712862	True	NM_005157,NM_198180	chr9,chr9	+,-	ABL1,QRFP	-1469,56415
chr9:95148849-95149157	chr9	+	95148853	95149023	True	NM_001012267,NM_014057	chr9,chr9	+,-	CENPP,OGN	-61171,17970
chr9:130478078-130478283	chr9	+	130478082	130478304	True	NM_001002913,NM_144965,NM_001012502	chr9,chr9,chr9	-,+,+	PTRH1,TTC16,C9orf117	-146,53,-8862
chr15:42751479-42752912	chr15	+	42751698	42752780	True	NM_022473,NM_003825	chr15,chr15	-,+	ZFP106,SNAP23	-1968,35054
chr11:70925768-70927500	chr11	+	70925804	70927526	True	NM_018161,NM_012309	chr11,chr11	+,-	NADSYN1,SHANK2	236690,8332
chr8:48921405-48921984	chr8	+	48921491	48921750	True	NM_003350,NM_006904	chr8,chr8	+,-	UBE2V2,PRKDC	-548,-48748
chr6:16238213-16238748	chr6	+	16238495	16238723	True	NM_000332,NM_006877	chr6,chr6	-,+	ATXN1,GMPR	523048,87
chr7:150102551-150102755	chr7	+	150102716	150102786	True	NR_027237,NM_002889	chr7,chr7	+,-	LOC728743,RARRES2	53,-63953
chr22:18560324-18560634	chr22	+	18560326	18560588	True	NM_001127649,NM_017929,NM_001199319,NM_001136004	chr22,chr22,chr22,chr22	+,+,+,-	PEX26,PEX26,PEX26,MICAL3	171,97,97,-53001
chr6:110798608-110798922	chr6	+	110798734	110798812	True	NM_015891,NM_033125	chr6,chr6	+,-	CDC40,SLC22A16	-297170,-890
chr18:5187725-5188748	chr18	+	5187874	5188627	True	NM_001145194,NR_015389	chr18,chr18	-,+	LOC642597,LOC339290	8678,49471
chr4:113183325-113183807	chr4	+	113183472	113183840	True	NM_018569,NM_052864	chr4,chr4	+,-	AP1AR,TIFA	-30636,23269
chr11:62312913-62313157	chr11	+	62312996	62313138	True	NM_001620,NM_000327,NM_024060	chr11,chr11,chr11	-,+,-	AHNAK,ROM1,AHNAK	1244,67074,1244
chr5:147439269-147439708	chr5	+	147439500	147439620	True	NM_001127698,NM_001127699,NM_206966,NM_006846	chr5,chr5,chr5,chr5	+,+,-,+	SPINK5,SPINK5,C5orf46,SPINK5	3914,3914,-153399,3914
chr19:38039813-38040077	chr19	+	38039876	38040034	True	NM_016536,NM_152606	chr19,chr19	-,+	ZNF571,ZNF540	45689,2273
chr3:182330927-182332253	chr3	+	182331149	182332292	True	NM_014616,NM_020640	chr3,chr3	+,-	ATP11B,DCUN1D1	178998,366084
chr13:28715300-28715695	chr13	+	28715427	28715589	True	NR_029383,NM_175854	chr13,chr13	-,+	LOC100288730,PAN3	-2116,-2835
chr14:74487252-74488007	chr14	+	74487493	74488019	True	NM_001249,NM_025057	chr14,chr14	-,+	ENTPD5,C14orf45	-1467,-1485
chr11:66405547-66405842	chr11	+	66405719	66405843	True	NM_002896,NM_001198844,NM_031492,NM_001198843	chr11,chr11,chr11,chr11	+,+,-,+	RBM4,RBM4,RBM4B,RBM4	244,244,39482,244
chr10:17159532-17161513	chr10	+	17159589	17161327	True	NM_001081,NM_003380	chr10,chr10	-,+	CUBN,VIM	10539,108930
chrX:118599160-118600121	chrX	+	118599467	118600167	True	NM_001152,NR_028443	chrX,chrX	+,-	SLC25A5,LOC100303728	2195,2974
chr16:89938991-89939419	chr16	+	89939001	89939467	True	NM_001018112,NM_014972	chr16,chr16	-,+	FANCA,TCF25	-55936,526
chr10:44069367-44069659	chr10	+	44069392	44069679	True	NM_001099284,NM_001099283,NM_001099282,NM_145312,NM_005674	chr10,chr10,chr10,chr10,chr10	-,-,-,+,-	ZNF239,ZNF239,ZNF239,ZNF485,ZNF239	437,437,436,32175,-5485
chr6:42183050-42184053	chr6	+	42183449	42183740	True	NM_000409,NM_018141	chr6,chr6	+,-	GUCA1A,MRPS10	-60357,1952
chr5:134183722-134184067	chr5	+	134184022	134184082	True	NM_152409,NM_002653,NM_001135586	chr5,chr5,chr5	+,-,+	C5orf24,PITX1,C5orf24	-2703,185932,-2415
chr9:130467437-130467919	chr9	+	130467545	130467795	True	NM_001002913,NM_001012502	chr9,chr9	-,+	PTRH1,C9orf117	10191,1475
chrY:6271439-6271673	chrY	+	6271441	6271705	True	NR_001538,NR_001536	chrY,chrY	+,-	TTTY1,TTTY2	-13027,24830
chrY:6271439-6271673	chrY	-	9598664	9598928	False	NR_001538,NR_003590	chrY,chrY	-,+	TTTY1,TTTY2B	13027,-24820
chr4:17990329-17991880	chr4	+	17990652	17991688	True	NM_153686,NM_022346	chr4,chr4	-,+	LCORL,NCAPG	31845,-178186
chr3:79068159-79068465	chr3	+	79068205	79068321	True	NM_001128929,NM_001145845,NM_133631	chr3,chr3,chr3	+,-,-	ROBO2,ROBO1,ROBO1	-1921093,338,338
chr20:50809064-50810516	chr20	+	50809133	50810512	True	NM_173485,NM_018197,NM_199426,NM_022088,NM_199427	chr20,chr20,chr20,chr20,chr20	+,-,-,-,-	TSHZ2,ZFP64,ZFP64,ZFP64,ZFP64	778433,-609,-609,-609,-609
chr13:113864535-113865349	chr13	+	113864593	113865373	True	NM_001127203,NM_001127202,NM_001008895,NM_003589,NM_018386	chr13,chr13,chr13,chr13,chr13	-,-,+,+,-	PCID2,PCID2,CUL4A,CUL4A,PCID2	-1564,-1564,-720,-1565,-1564
chr1:145713721-145713995	chr1	+	145713721	145714017	True	NM_001201325,NM_007053	chr1,chr1	+,-	PDZK1,CD160	13648,1598
chr7:100034626-100034832	chr7	+	100034810	100034880	True	NM_001194992,NM_001194991,NM_001194990,NM_019606,NM_017984,NM_145030	chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,-,-	MEPCE,MEPCE,MEPCE,MEPCE,ZCWPW1,C7orf47	-8448,-8448,-8448,-7607,-8508,-716
chr10:98062382-98064301	chr10	+	98062530	98064008	True	NM_001017520,NM_013314,NM_004088	chr10,chr10,chr10	+,-,+	DNTT,BLNK,DNTT	76,-31197,76
chr6:10888621-10888975	chr6	+	10888648	10889013	True	NM_004752,NM_001040274	chr6,chr6	-,+	GCM2,SYCP2L	-6550,-1636
chr1:60522331-60522785	chr1	+	60522330	60522832	True	NM_015888,NM_152377	chr1,chr1	+,-	HOOK1,C1orf87	-241859,16660
chr12:57324941-57326061	chr12	+	57325093	57326077	True	NM_148897,NM_007264	chr12,chr12	-,+	SDR9C7,GPR182	2162,62277
chr11:123066930-123067236	chr11	+	123067004	123067236	True	NR_027288,NM_024769	chr11,chr11	+,-	LOC341056,CLMP	-178781,-997
chr2:202900075-202900283	chr2	+	202900147	202900263	True	NM_001005781,NM_003507	chr2,chr2	-,+	SUMO1,FZD7	203109,-888
chr1:156165863-156167265	chr1	+	156166031	156167275	True	NM_014655,NM_198406	chr1,chr1	+,-	SLC25A44,PAQR6	-2353,50567
chr14:55035244-55036005	chr14	+	55035337	55036019	True	NM_004124,NM_015589,NM_001161576	chr14,chr14,chr14	-,+,+	GMFB,SAMD4A,SAMD4A	-79593,-760,-760
chrX:21859256-21861112	chrX	+	21859560	21861131	True	NM_015884,NM_014332	chrX,chrX	+,-	MBTPS2,SMPX	-1964,-83330
chr12:113573905-113574647	chr12	+	113574014	113574599	True	NM_001144872,NM_001193521,NM_004658,NM_001193520	chr12,chr12,chr12,chr12	+,-,-,-	CCDC42B,RASAL1,RASAL1,RASAL1	13063,-455,30,30
chr19:36138970-36139215	chr19	+	36138975	36139259	True	NM_000704,NM_001863,NM_014209	chr19,chr19,chr19	-,+,+	ATP4A,COX6B1,ETV2	-84415,-3,-6379
chr17:7254222-7254552	chr17	+	7254226	7254460	True	NM_032442,NM_198154,NM_001002914	chr17,chr17,chr17	-,+,+	NEURL4,TMEM95,KCTD11	-21588,4036,747
chr1:151776895-151777178	chr1	+	151776928	151777226	True	NR_024237,NM_001004432	chr1,chr1	+,-	LOC100132111,LINGO4	33718,706
chr2:133043021-133043620	chr2	+	133043104	133043656	True	NM_001508,NR_027020	chr2,chr2	+,-	GPR39,ANKRD30BL	130490,-27562
chr19:43440890-43441340	chr19	+	43441145	43441293	True	NM_002783,NR_036584	chr19,chr19	-,+	PSG7,LOC100289650	87,-115181
chrX:40038319-40038974	chrX	+	40038406	40038975	True	NM_001123384,NM_005765,NM_001123383	chrX,chrX,chrX	-,+,-	BCOR,ATP6AP2,BCOR	-1824,401240,-1824
chr7:142551776-142552016	chr7	+	142551775	142552046	True	NM_004445,NM_018646	chr7,chr7	+,-	EPHB6,TRPV6	745,31481
chr18:48705464-48707006	chr18	+	48705738	48706801	True	NM_005359,NM_016626	chr18,chr18	+,-	SMAD4,MEX3C	-149206,17301
chr14:95787094-95787425	chr14	+	95787111	95787467	True	NR_015415,NM_024734	chr14,chr14	+,-	FLJ45244,CLMN	-163137,-866
chr5:38263418-38264192	chr5	+	38263638	38264148	True	NM_152403,NM_001127671	chr5,chr5	+,-	EGFLAM,LIFR	-5167,292650
chr8:27694753-27695121	chr8	+	27694809	27694875	True	NM_001017420,NM_018492	chr8,chr8	+,-	ESCO2,PBK	-62802,524
chr19:39688569-39689055	chr19	+	39688663	39689103	True	NM_001080468,NM_001001414	chr19,chr19	-,+	SYCN,NCCRP1	5853,-1110
chr12:99524299-99525576	chr12	+	99524307	99525576	True	NM_181869,NM_020140	chr12,chr12	+,-	APAF1,ANKS1B	-485280,23051
chr5:68788910-68789180	chr5	+	68788947	68789031	True	NM_002538,NM_001205254,NM_001015892	chr5,chr5,chr5	+,+,-	OCLN,OCLN,TAF9	-879,-408,-123107
chr5:140243331-140243747	chr5	+	140243594	140243803	True	NM_031861,NM_031860,NM_002109,NM_031859,NM_018902,NM_018901	chr5,chr5,chr5,chr5,chr5,chr5	+,+,-,+,+,+	PCDHA11,PCDHA10,HARS,PCDHA10,PCDHA11,PCDHA10	4027,-8020,-172623,-8020,4027,-8020
chr22:41762479-41763074	chr22	+	41762485	41762987	True	NM_001145398,NM_016272,NM_002883	chr22,chr22,chr22	+,-,-	TEF,TOB2,RANGAP1	404,80090,-80269
chrX:113817443-113817653	chrX	+	113817445	113817683	True	NM_000868,NM_000640	chrX,chrX	+,-	HTR2C,IL13RA2	867,434574
chr2:170622263-170622695	chr2	+	170622278	170622603	True	NM_144711,NM_014168	chr2,chr2	+,-	KLHL23,METTL5	-31973,58811
chr16:80572122-80574084	chr16	+	80572239	80574097	True	NM_152342,NM_130897	chr16,chr16	-,+	CDYL2,DYNLRB2	264128,756
chr5:80497564-80499512	chr5	+	80497718	80499522	True	NR_034121,NR_002754,NR_002755	chr5,chr5,chr5	-,+,+	LOC100131067,RNU5E,RNU5D	97916,1939,1940
chr2:39101907-39102364	chr2	+	39102145	39102387	True	NM_001145450,NM_198963	chr2,chr2	+,-	MORN2,DHX57	715,686
chr5:159624158-159624566	chr5	+	159624222	159624499	True	NM_001130958,NM_001040442,NM_001130864	chr5,chr5,chr5	+,+,-	FABP6,FABP6,PWWP2A	-9899,1548,-77770
chr3:52321547-52321758	chr3	+	52321682	52321754	True	NM_001144951,NR_029677,NM_025222,NR_026701,NR_026700,NR_026702,NM_145262,NR_026699	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,-,-,+,+,+,+,+	GLYCTK,MIR135A1,WDR82,GLYCTK,GLYCTK,GLYCTK,GLYCTK,GLYCTK	81,6620,-9023,81,81,81,81,81
chr1:28846891-28847309	chr1	+	28846890	28847296	True	NM_001269,NM_001048195,NM_001048194,NR_003077	chr1,chr1,chr1,chr1	+,+,+,-	RCC1,RCC1,RCC1,SNORD99	-2196,-2196,-2196,58088
chr11:77303166-77304400	chr11	+	77303334	77304352	True	NM_173039,NM_001293	chr11,chr11	+,-	AQP11,CLNS1A	-2711,44562
chr7:128576727-128577051	chr7	+	128576792	128577076	True	NM_199349,NM_001098629,NM_001098630,NM_032643,NM_001098627	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	KCP,IRF5,IRF5,IRF5,IRF5	-26019,917,917,1194,3695
chrX:7066435-7066747	chrX	+	7066578	7066744	True	NM_012080,NM_001135565,NM_000351,NM_001178136,NM_001178135	chrX,chrX,chrX,chrX,chrX	-,-,+,-,-	HDHD1,HDHD1,STS,HDHD1,HDHD1	-347,-347,70727,-347,-347
chr4:981701-982233	chr4	+	981709	982223	True	NM_022042,NM_000203,NM_134425,NM_213613	chr4,chr4,chr4,chr4	-,+,-,-	SLC26A1,IDUA,SLC26A1,SLC26A1	5010,-975,5010,5051
chr22:35923181-35923784	chr22	+	35923382	35923636	True	NM_005368,NM_014310	chr22,chr22	-,+	MB,RASD2	89798,13715
chr9:31995812-31996959	chr9	+	31996225	31996836	True	NM_014314,NM_002197	chr9,chr9	-,+	DDX58,ACO1	529536,387764
chr5:133562116-133562392	chr5	+	133562328	133562396	True	NR_037434,NM_002715	chr5,chr5	+,-	MIR3661,PPP2CA	-931,-378
chr17:8703222-8703891	chr17	+	8703228	8703635	True	NM_152599,NM_004822	chr17,chr17	-,+	MFSD6L,NTN1	-561,221223
chr4:3319525-3319811	chr4	+	3319524	3319791	True	NM_002926,NM_198229,NM_002337	chr4,chr4,chr4	+,+,-	RGS12,RGS12,LRPAP1	-3701,-3701,214484
chr1:201956724-201958108	chr1	+	201956853	201958153	True	NM_020216,NM_012134	chr1,chr1	+,-	RNPEP,LMOD1	-5138,-41137
chr9:77112934-77113272	chr9	+	77113042	77113232	True	NM_006914,NM_001177311	chr9,chr9	+,-	RORB,TRPM6	-841,389081
chr4:77117244-77118130	chr4	+	77117537	77118154	True	NM_001204255,NM_001136570	chr4,chr4	-,+	SCARB2,FAM47E	16948,54698
chr16:79804656-79805060	chr16	+	79804807	79804954	True	NM_005360,NM_130897	chr16,chr16	-,+	MAF,DYNLRB2	-170185,769899
chr15:74374142-74374399	chr15	+	74374283	74374343	True	NM_001130136,NM_001038640	chr15,chr15	+,-	ISLR2,GOLGA6A	47371,598
chr15:74374142-74374399	chr15	+	78218600	78218660	False	NM_001101404,NR_027024	chr15,chr15	+,-	SH2D7,LOC645752	166266,578
chr15:74374142-74374399	chr15	-	72947585	72947645	False	NR_002780,NM_018652	chr15,chr15	-,+	HIGD2B,GOLGA6B	30895,-598
chr15:74374142-74374399	chr15	-	75575723	75575783	False	NR_030360,NM_001145224	chr15,chr15	-,+	MIR631,GOLGA6D	70293,-592
chr2:231084769-231086228	chr2	+	231084945	231086245	True	NM_001185015,NM_001005176,NM_004509,NM_007237,NM_004510,NM_080424	chr2,chr2,chr2,chr2,chr2,chr2	-,+,-,+,-,-	SP110,SP140,SP110,SP140,SP110,SP110	4249,4199,-118,4199,-118,-118
chr9:139963683-139964052	chr9	+	139963715	139964073	True	NM_207309,NM_178448	chr9,chr9	+,-	UAP1L1,C9orf140	7879,1005
chr11:616384-616857	chr11	+	616580	616840	True	NM_004031,NM_000797,NM_004029,NM_001171968,NM_021924,NM_001572,NM_031264	chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,+,-,-,-,-,-	IRF7,DRD4,IRF7,CDHR5,CDHR5,IRF7,CDHR5	-852,20464,-581,8277,8277,-581,8277
chr7:92912706-92913183	chr7	+	92912841	92913193	True	NM_017667,NM_001039372	chr7,chr7	+,-	CCDC132,HEPACAM2	-51240,-57059
chr19:36206568-36207099	chr19	+	36206738	36207006	True	NM_014727,NM_024660,NM_014383	chr19,chr19,chr19	+,-,+	MLL4,IGFLR1,ZBTB32	1914,26395,-2959
chr20:58181458-58181820	chr20	+	58181483	58181792	True	NM_080672,NM_014258	chr20,chr20	+,-	PHACTR3,SYCP2	-1931,325468
chr16:71753295-71753791	chr16	+	71753528	71753697	True	NM_015020,NM_001017967	chr16,chr16	-,+	PHLPP2,MARVELD3	-4824,-93518
chr5:34657787-34658825	chr5	+	34657841	34658550	True	NM_001145520,NR_026591,NM_001145522,NM_015577	chr5,chr5,chr5,chr5	+,-,+,+	RAI14,RAD1,RAI14,RAI14	-1296,257232,-1459,-1459
chr6:117002683-117003414	chr6	+	117002687	117003154	True	NM_145062,NM_002269	chr6,chr6	-,+	ZUFSP,KPNA5	-12714,-371
chr1:213093994-213094259	chr1	+	213094023	213094289	True	NM_001136474,NR_027286	chr1,chr1	+,-	VASH2,NCRNA00292	29597,-62543
chr19:42215147-42216525	chr19	+	42215201	42216533	True	NM_004363,NM_006890	chr19,chr19	+,-	CEACAM5,CEACAM7	-2722,-23105
chr1:17339843-17340599	chr1	+	17340022	17340643	True	NM_014675,NM_001141974,NM_001141973,NM_022089	chr1,chr1,chr1,chr1	+,-,-,-	CROCC,ATP13A2,ATP13A2,ATP13A2	-91628,-1599,-1599,-1599
chr7:6390678-6391164	chr7	+	6390966	6391177	True	NM_006908,NM_001037163	chr7,chr7	+,-	RAC1,C7orf70	22948,-2376
chr2:23676857-23677105	chr2	+	23676905	23677085	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	472899,-68658
chr9:117375421-117377267	chr9	+	117375558	117377001	True	NM_153045,NM_001199233	chr9,chr9	+,-	C9orf91,LOC100505478	-1903,67419
chr13:22246501-22247212	chr13	+	22246501	22247146	True	NM_152726,NM_002010	chr13,chr13	-,+	EFHA1,FGF9	-68146,-1337
chr8:33333685-33334048	chr8	+	33333692	33333966	True	NM_032509,NM_032664	chr8,chr8	+,-	MAK16,FUT10	8718,-3028
chr16:23522773-23523224	chr16	+	23522773	23523226	True	NM_019116,NM_015044	chr16,chr16	+,-	UBFD1,GGA2	45635,-958
chr1:113250190-113250703	chr1	+	113250282	113250706	True	NM_001042678,NM_001042679,NM_005167,NM_001004440,NM_175744	chr1,chr1,chr1,chr1,chr1	-,-,-,+,-	RHOC,RHOC,PPM1J,FAM19A3,RHOC	-257,-604,7294,12482,-257
chr22:39794750-39795016	chr22	+	39794750	39794821	True	NM_006116,NM_153497,NM_001033853	chr22,chr22,chr22	+,+,-	TAB1,TAB1,RPL3	937,937,-79080
chr17:73633744-73634283	chr17	+	73633749	73634265	True	NR_028439,NM_001162997,NM_001162995,NM_004259	chr17,chr17,chr17,chr17	+,+,+,-	LOC643008,LOC100130933,LOC643008,RECQL5	-1125,8380,-4286,29050
chr17:35660584-35661637	chr17	+	35660836	35661090	True	NM_198837,NM_198838,NM_173625	chr17,chr17,chr17	-,-,+	ACACA,ACACA,C17orf78	-4144,-4144,71894
chr22:38865777-38865983	chr22	+	38865776	38865893	True	NM_016657,NM_006855,NM_152868	chr22,chr22,chr22	+,+,-	KDELR3,KDELR3,KCNJ4	-1744,-1744,-14573
chr12:45599712-45601145	chr12	+	45599852	45600438	True	NM_001142679,NR_037144,NM_001025356,NM_001204803,NM_001142680	chr12,chr12,chr12,chr12,chr12	+,-,+,+,+	ANO6,PLEKHA8P1,ANO6,ANO6,ANO6	9331,9409,9331,9331,9437
chr1:120611908-120612388	chr1	+	120612135	120612429	True	NM_001200001,NM_024408,NM_001100910	chr1,chr1,chr1	-,-,+	NOTCH2,NOTCH2,FAM72B	-62,-62,226575
chr1:120611908-120612388	chr1	-	145208955	145209005	False	NM_203458,NM_022359	chr1,chr1	+,-	NOTCH2NL,PDE4DIP	105,-132769
chr1:111769873-111770109	chr1	+	111770015	111770157	True	NM_001025199,NM_004000,NM_024901,NM_001025197	chr1,chr1,chr1,chr1	+,+,-,+	CHI3L2,CHI3L2,DENND2D,CHI3L2	2175,123,-26734,123
chr9:40789240-40789816	chr9	+	40789393	40789825	True	NR_026801,NM_033160	chr9,chr9	+,-	FAM74A3,ZNF658	-73920,2338
chr9:40789240-40789816	chr9	+	39461805	39461855	False	NM_001040065,NR_003528	chr9,chr9	+,-	FAM75A2,LOC653501	-106157,2721
chr9:40789240-40789816	chr9	+	41606823	41606873	False	NM_001113541,NR_003528	chr9,chr9	+,-	FAM75A5,LOC653501	-106195,2721
chr17:46801127-46801377	chr17	+	46801130	46801388	True	NR_036150,NR_024103,NM_032391,NM_006361	chr17,chr17,chr17,chr17	-,+,-,-	MIR3185,NCRNA00253,PRAC,HOXB13	499,-639,-1248,4773
chr7:151575524-151576048	chr7	+	151575533	151576018	True	NM_145292,NM_016203	chr7,chr7	+,-	GALNTL5,PRKAG2	77445,-1217
chr4:95128803-95129025	chr4	+	95128851	95128977	True	NM_001128429,NM_020159,NM_001128430,NM_014485	chr4,chr4,chr4,chr4	+,+,+,-	SMARCAD1,SMARCAD1,SMARCAD1,HPGDS	38,38,-144,135100
chr2:37898141-37898372	chr2	+	37898156	37898368	True	NM_006449,NM_001170791	chr2,chr2	-,+	CDC42EP3,FAM82A1	1008,254093
chrX:100871066-100871601	chrX	+	100871117	100871557	True	NM_019007,NM_001009584,NM_001184768,NR_033670,NM_016607,NM_177948,NM_177947,NR_033669	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,+,+,+,-	ARMCX6,ARMCX6,ARMCX6,ARMCX6,ARMCX3,ARMCX3,ARMCX3,ARMCX6	1484,1484,1484,1484,6562,6793,6562,1484
chrX:100871066-100871601	chrX	-	100852589	100852639	False	NM_001009584,NM_016607	chrX,chrX	-,+	ARMCX6,ARMCX3	20402,25480
chr12:53896893-53897320	chr12	+	53897032	53897356	True	NM_003717,NM_004178,NM_134323,NM_001193511,NM_134324,NM_006301	chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,-,+,-	NPFF,TARBP2,TARBP2,MAP3K12,TARBP2,MAP3K12	4116,-2378,-2378,-3588,-1706,-3588
chrX:103400655-103401037	chrX	+	103400784	103401073	True	NM_001012755,NM_207318	chrX,chrX	-,+	MCART6,FAM199X	686,10227
chr15:65478158-65478502	chr15	+	65478206	65478549	True	NM_001101362,NM_006660	chr15,chr15	+,-	KBTBD13,CLPX	-109110,-643
chr6:142463572-142464512	chr6	+	142463616	142464401	True	NM_016485,NM_002511	chr6,chr6	+,-	VTA1,NMBR	4008,-53680
chr1:155226072-155226436	chr1	+	155226178	155226400	True	NM_020897,NM_198264,NM_052837,NM_006589,NM_005698	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	HCN3,FAM189B,SCAMP3,FAM189B,SCAMP3	20973,-904,5845,-904,5845
chr17:34085272-34085565	chr17	+	34085289	34085434	True	NM_145272,NM_139285	chr17,chr17	+,-	C17orf50,GAS2L2	2481,-5392
chr15:35528694-35529404	chr15	+	35528942	35529304	True	NR_003144,NR_037507	chr15,chr15	+,-	LOC723972,MIR3942	222,135313
chr2:88050623-88052124	chr2	+	88051017	88052092	True	NM_001032392,NM_001078170,NM_002665	chr2,chr2,chr2	+,-,+	PLGLB1,RGPD2,PLGLB2	-3458,73253,-3462
chr2:88050623-88052124	chr2	-	87244484	87245025	False	NM_001032392,NM_002665,NM_001024457	chr2,chr2,chr2	-,-,+	PLGLB1,PLGLB2,RGPD1	4003,4007,-99806
chr2:88050623-88052124	chr2	+	107001987	107002907	False	NR_003506,NM_001144013	chr2,chr2	+,-	PLGLA,RGPD3	-139,81944
chr8:38246094-38247029	chr8	+	38246588	38246728	True	NM_017778,NM_001199660,NM_023034,NM_001199659,NM_144652	chr8,chr8,chr8,chr8,chr8	-,+,-,+,+	WHSC1L1,LETM2,WHSC1L1,LETM2,LETM2	-6798,-2003,-6798,-2693,-2693
chr9:136284257-136284949	chr9	+	136284320	136284856	True	NR_024514,NM_139025,NM_139026,NM_139027,NM_020385	chr9,chr9,chr9,chr9,chr9	+,+,+,+,-	ADAMTS13,ADAMTS13,ADAMTS13,ADAMTS13,REXO4	-4912,2263,2263,2263,-1156
chr12:112126375-112127210	chr12	+	112126647	112127125	True	NM_006768,NM_001136538,NM_025247	chr12,chr12,chr12	-,+,+	BRAP,ACAD10,ACAD10	-2857,-2842,-2842
chr19:42948991-42949638	chr19	+	42949045	42949683	True	NM_198477,NM_001410	chr19,chr19	-,+	CXCL17,MEGF8	-1909,-119351
chr20:38810141-38810905	chr20	+	38810239	38810925	True	NM_003286,NM_005461	chr20,chr20	+,-	TOP1,MAFB	846536,507001
chr22:43483766-43484433	chr22	+	43484168	43484312	True	NM_001197,NR_027779,NM_012263	chr22,chr22,chr22	+,-,-	BIK,TTLL1,TTLL1	22444,1172,1172
chr17:41047774-41048382	chr17	+	41048263	41048351	True	NM_000151,NR_027254	chr17,chr17	+,-	G6PC,LOC388387	4463,2450
chr2:241937604-241937994	chr2	+	241937721	241937845	True	NR_033841,NM_001080437	chr2,chr2	-,+	LOC200772,SNED1	-30853,409
chrX:84581528-84583301	chrX	+	84581803	84583113	True	NM_021998,NM_024921	chrX,chrX	+,-	ZNF711,POF1B	-82857,51685
chr19:7294638-7294868	chr19	+	7294658	7294907	True	NM_000208,NM_001079817,NM_015318	chr19,chr19,chr19	-,-,+	INSR,INSR,ARHGEF18	-647,-647,165091
chr6:13712742-13713411	chr6	+	13712772	13713319	True	NM_005493,NM_016167	chr6,chr6	-,+	RANBP9,NOL7	-976,-97274
chr16:71927791-71928094	chr16	+	71927971	71928095	True	NM_001201554,NM_014761,NM_001201556,NM_001201552	chr16,chr16,chr16,chr16	-,+,-,-	ZNF821,KIAA0174,ZNF821,ZNF821	-9878,1350,-9878,-9878
chr1:149219772-149221405	chr1	+	149220073	149221458	True	NM_001024599,NR_027002	chr1,chr1	-,+	HIST2H2BF,LOC388692	177827,58017
chr1:223566362-223566616	chr1	+	223566382	223566550	True	NM_152610,NM_001037175	chr1,chr1	+,-	C1orf65,SUSD4	164,-28838
chr2:33162409-33163264	chr2	+	33162711	33163195	True	NM_206943,NM_015475	chr2,chr2	+,-	LTBP1,FAM98A	9173,661217
chr8:55013847-55014053	chr8	+	55013896	55013998	True	NM_014175,NM_006330	chr8,chr8	+,-	MRPL15,LYPLA1	33782,629
chr8:145721889-145722188	chr8	+	145721990	145722236	True	NM_032902,NM_005309,NM_003923	chr8,chr8,chr8	+,+,-	PPP1R16A,GPT,FOXH1	62,7228,-20272
chr12:42634858-42635844	chr12	+	42634960	42635727	True	NM_001190977,NM_005748,NM_001190980,NR_034000,NM_001190979,NM_201438	chr12,chr12,chr12,chr12,chr12,chr12	-,-,-,-,-,+	YAF2,YAF2,YAF2,YAF2,YAF2,PPHLN1	-2871,-2806,-2809,-2809,-2809,84219
chr19:52255926-52256464	chr19	+	52256180	52256478	True	NM_002029,NM_001193306,NM_001005738	chr19,chr19,chr19	-,-,+	FPR1,FPR1,FPR2	-1030,-1030,7974
chr3:58292368-58292760	chr3	+	58292454	58292734	True	NM_007042,NM_004944,NM_001098783	chr3,chr3,chr3	+,-,+	RPP14,DNASE1L3,RPP14	-531,-92056,-533
chr1:100315088-100315425	chr1	+	100315091	100315449	True	NM_000643,NM_000642,NM_000644,NM_000646,NM_000028,NM_001013660	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-	AGL,AGL,AGL,AGL,AGL,FRRS1	595,190,595,1081,595,-83742
chr22:44894645-44895422	chr22	+	44895060	44895377	True	NR_028409,NM_032287	chr22,chr22	+,-	NCRNA00207,LDOC1L	69842,-1055
chr7:142584787-142585916	chr7	+	142584867	142585912	True	NM_004445,NM_018646	chr7,chr7	+,-	EPHB6,TRPV6	-32128,-1390
chrX:130954837-130956188	chrX	+	130955239	130956056	True	NM_001042453,NR_026975	chrX,chrX	+,-	MST4,LOC286467	201188,8665
chr6:161586027-161587059	chr6	+	161586154	161587098	True	NM_006724,NR_024277	chr6,chr6	+,-	MAP3K4,NCRNA00241	-173384,-3140
chr7:143103228-143104415	chr7	+	143103342	143104334	True	NR_033897,NM_005232	chr7,chr7	+,-	LOC285965,EPHA1	571,1705
chr15:72427561-72428254	chr15	+	72427932	72428296	True	NM_006901,NM_145204	chr15,chr15	-,+	MYO9A,SENP8	-17510,-17357
chr9:115876810-115877403	chr9	+	115876948	115877384	True	NR_024376,NR_024366	chr9,chr9	-,+	NCRNA00256B,NCRNA00256A	-2991,-1823
chr9:115876810-115877403	chr9	-	115871748	115872184	False	NR_024376,NR_024366	chr9,chr9	-,+	NCRNA00256B,NCRNA00256A	1823,2991
chr12:21720928-21721273	chr12	+	21721138	21721320	True	NM_030572,NM_021957	chr12,chr12	+,-	C12orf39,GYS2	-41947,36511
chr7:117178926-117180282	chr7	+	117179059	117180297	True	NR_023315,NM_000492	chr7,chr7	-,+	ASZ1,CFTR	-111482,-59093
chr22:42341733-42342179	chr22	+	42341745	42342217	True	NM_024053,NM_001002876,NM_001110215,NR_024355	chr22,chr22,chr22,chr22	-,-,-,+	CENPM,CENPM,CENPM,LOC339674	981,981,-5522,5973
chr5:41509067-41509893	chr5	+	41509161	41509868	True	NM_175921,NM_001005473	chr5,chr5	+,-	C5orf51,PLCXD3	394601,912
chr1:84972459-84972677	chr1	+	84972483	84972730	True	NR_036561,NM_005274	chr1,chr1	+,-	SPATA1,GNG5	-560,-221
chr20:56195562-56196021	chr20	+	56195667	56195747	True	NM_030776,NM_001160417,NM_001160419,NM_001160418,NM_002591	chr20,chr20,chr20,chr20,chr20	-,-,-,-,+	ZBP1,ZBP1,ZBP1,ZBP1,PCK1	-35,-35,-35,-35,-59581
chr1:151762759-151762980	chr1	+	151762782	151762916	True	NM_016178,NM_006862,NM_001083963,NM_001083965,NM_001083964	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	OAZ3,TDRKH,TDRKH,TDRKH,TDRKH	-23702,144,144,144,144
chr2:71253491-71255253	chr2	+	71253834	71254448	True	NR_002185,NM_144582	chr2,chr2	+,-	OR7E91P,TEX261	-2681,-31833
chr14:63546294-63547297	chr14	+	63546470	63547208	True	NM_172376,NM_020663	chr14,chr14	-,+	KCNH5,RHOJ	21435,123936
chr5:179114397-179115455	chr5	+	179114408	179114765	True	NM_001024649,NM_001164444	chr5,chr5	+,-	CANX,CBY3	11164,-6433
chr1:47778918-47779155	chr1	+	47779019	47779080	True	NM_001136140,NM_001048166,NM_003035	chr1,chr1,chr1	+,-,-	CMPK1,STIL,STIL	20388,790,790
chr11:9597575-9598065	chr11	+	9597587	9598108	True	NR_036539,NM_003390,NM_001143976	chr11,chr11,chr11	-,+,+	LOC644656,WEE1,WEE1	-115342,-2411,-1405
chr16:22020628-22021001	chr16	+	22020735	22020992	True	NM_173806,NR_033694,NM_001164579	chr16,chr16,chr16	-,-,+	PDZD9,PDZD9,C16orf52	-8304,-8304,-1330
chr21:15752147-15753017	chr21	+	15752498	15753048	True	NR_003087,NM_006948	chr21,chr21	+,-	ABCC13,HSPA13	-106439,2516
chr1:248904387-248905547	chr1	+	248904452	248905438	True	NM_001085474,NR_036070	chr1,chr1	-,+	LOC646627,MIR3124	-1301,215137
chr19:38723655-38724214	chr19	+	38723814	38723968	True	NM_001135156,NM_004647,NM_001135155,NM_001166103	chr19,chr19,chr19,chr19	-,-,-,+	DPF1,DPF1,DPF1,SPINT2	-3497,-8924,-8924,31129
chr1:222763267-222763808	chr1	+	222763298	222763790	True	NM_001201536,NM_139352,NM_198551,NM_005681	chr1,chr1,chr1,chr1	-,-,+,-	TAF1A,TAF1A,MIA3,TAF1A	-23,-23,27653,-23
chr10:71905599-71905918	chr10	+	71905764	71905880	True	NM_018649,NM_001040273,NM_173555	chr10,chr10,chr10	+,-,-	H2AFY2,TYSND1,TYSND1	-93458,666,666
chrX:2924398-2926309	chrX	+	2924442	2926018	True	NM_000047,NM_001011719	chrX,chrX	-,+	ARSE,ARSH	-41948,-27
chr15:59905951-59907111	chr15	+	59906230	59907086	True	NM_004751,NM_004492	chr15,chr15	+,-	GCNT3,GTF2A2	-2307,42701
chr19:12544912-12546365	chr19	+	12545024	12546412	True	NM_153358,NM_005815	chr19,chr19	+,-	ZNF791,ZNF443	175319,5573
chr12:56498755-56499019	chr12	+	56498790	56499000	True	NM_001130420,NM_006191	chr12,chr12	-,+	SMARCC2,PA2G4	84401,-738
chr1:149871240-149871497	chr1	+	149871267	149871431	True	NM_175065,NM_016074	chr1,chr1	-,+	HIST2H2AB,BOLA1	-11801,-163
chr12:132196345-132196549	chr12	+	132196373	132196595	True	NM_175066,NM_004592	chr12,chr12	-,+	DDX51,SFSWAP	432335,-789
chr3:150803671-150803962	chr3	+	150803918	150803978	True	NM_053002,NM_174878	chr3,chr3	+,-	MED12L,CLRN1	697,-113132
chr7:30789973-30790901	chr7	+	30790200	30790920	True	NM_001202481,NM_006774,NR_037598,NM_001199219	chr7,chr7,chr7,chr7	-,+,+,+	CRHR2,INMT,INMT-FAM188B,INMT	-50481,830,830,830
chr2:95825660-95826463	chr2	+	95825709	95826307	True	NM_021088,NM_032788,NM_001017396	chr2,chr2,chr2	+,-,+	ZNF2,ZNF514,ZNF2	4875,-446,4875
chr1:24437652-24438119	chr1	+	24437709	24438165	True	NM_152372,NR_027087	chr1,chr1	-,+	MYOM3,LOC284632	550,88564
chr19:36859090-36859836	chr19	+	36859387	36859739	True	NM_020917,NR_033748	chr19,chr19	-,+	ZFP14,LOC644189	10416,52699
chr9:115649569-115650090	chr9	+	115649586	115650109	True	NM_001012994,NM_033051	chr9,chr9	+,-	SNX30,SLC46A2	-136504,3135
chr19:839381-839589	chr19	+	839405	839546	True	NM_002777,NM_024888	chr19,chr19	+,-	PRTN3,LPPR3	1438,-17453
chr9:136083671-136083937	chr9	+	136083836	136083986	True	NM_014581,NR_001275	chr9,chr9	-,+	OBP2B,CELP	692,-125961
chr9:136083671-136083937	chr9	-	138438626	138438684	False	NM_014582,NM_144654	chr9,chr9	+,-	OBP2A,C9orf116	-692,-46865
chr1:156551821-156552240	chr1	+	156551973	156552227	True	NM_144772,NM_178229,NM_001105669	chr1,chr1,chr1	+,-,+	APOA1BP,IQGAP3,TTC24	9330,-9577,-2505
chr20:30778246-30778492	chr20	+	30778384	30778462	True	NR_002781,NM_172236	chr20,chr20	-,+	TSPY26P,POFUT1	-221,17233
chr2:120124494-120124699	chr2	+	120124523	120124653	True	NM_001079863,NM_001079862,NM_020548,NM_001178017,NM_001178043,NM_001178042,NM_001178041,NM_001017927	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,+,+,+,-	DBI,DBI,DBI,DBI,DBI,DBI,DBI,C2orf76	597,-70,-21,175,-21,-21,-21,-265
chr5:176853056-176853266	chr5	+	176853138	176853302	True	NM_001004106,NM_000505,NM_001004105,NM_002082	chr5,chr5,chr5,chr5	+,-,+,+	GRK6,F12,GRK6,GRK6	384,-16561,384,384
chr6:1609589-1609802	chr6	+	1609588	1609850	True	NM_001453,NR_027116	chr6,chr6	+,-	FOXC1,LOC285768	830,-508021
chr11:2158117-2158568	chr11	+	2158137	2158549	True	NM_001127598,NR_028044,NR_028043,NM_000612,NR_030158	chr11,chr11,chr11,chr11,chr11	-,+,+,-,-	IGF2,IGF2AS,IGF2AS,IGF2,MIR483	3842,3208,3208,1705,-2698
chr12:111470825-111471196	chr12	+	111470890	111471180	True	NM_000432,NM_015267	chr12,chr12	-,+	MYL2,CUX2	-112486,647
chr8:9981239-9983090	chr8	+	9981457	9982807	True	NM_001199729,NR_029668	chr8,chr8	+,-	MSRA,MIR124-1	-28442,-220475
chr16:46860011-46861653	chr16	+	46860157	46861241	True	NM_133443,NM_001001436	chr16,chr16	+,-	GPT2,C16orf87	57066,3890
chr1:6238062-6238396	chr1	+	6238072	6238162	True	NM_207396,NM_015557	chr1,chr1	+,-	RNF207,CHD5	28026,2082
chrX:72302659-72304608	chrX	+	72303106	72304561	True	NM_001042506,NM_001012977	chrX,chrX	+,-	PABPC1L2B,PABPC1L2A	-79806,-3755
chrX:72302659-72304608	chrX	-	72218139	72219594	False	NR_026595,NM_001042506	chrX,chrX	-,+	NCRNA00246,PABPC1L2B	-54550,3757
chr7:43941357-43942233	chr7	+	43941498	43942278	True	NM_017920,NM_001204871,NM_001077663,NM_015983	chr7,chr7,chr7,chr7	-,-,-,+	URGCP,URGCP-MRPS24,URGCP,UBE2D4	4011,4011,4011,23756
chr13:79979569-79979826	chr13	+	79979590	79979824	True	NM_001161407,NM_022118	chr13,chr13	+,-	NDFIP2,RBM26	75434,149
chr8:145979994-145980371	chr8	+	145980071	145980347	True	NM_138367,NM_213605	chr8,chr8	-,+	ZNF251,ZNF517	673,43913
chr5:42760328-42761571	chr5	+	42760595	42761228	True	NM_001134848,NM_001085486	chr5,chr5	+,-	CCDC152,SEPP1	-3726,50853
chr2:131358035-131358485	chr2	+	131358062	131358204	True	NR_027314,NM_032545,NM_001079530	chr2,chr2,chr2	+,-,-	LOC150527,CFC1,CFC1B	-29691,-980,-811
chr2:131358035-131358485	chr2	-	131277713	131277855	False	NR_027314,NM_032545,NM_001079530	chr2,chr2,chr2	-,+,+	LOC150527,CFC1,CFC1B	29663,980,811
chr17:42734549-42734842	chr17	+	42734553	42734728	True	NM_001099225,NM_001145080	chr17,chr17	-,+	CCDC43,C17orf104	32488,-842
chr2:105954616-105954971	chr2	+	105954648	105955016	True	NM_001142621,NM_024093,NM_004257	chr2,chr2,chr2	-,+,-	TGFBRAP1,C2orf49,TGFBRAP1	-8500,-686,-8500
chr8:145584768-145585191	chr8	+	145584767	145585183	True	NM_024531,NM_012162,NR_015428,NM_024555	chr8,chr8,chr8,chr8	+,-,-,-	GPR172A,FBXL6,C8ORFK29,FBXL6	-2593,-2635,-6262,-2635
chr15:67417514-67417858	chr15	+	67417616	67417906	True	NM_001145102,NM_024666	chr15,chr15	+,-	SMAD3,AAGAB	147,129218
chr3:127300475-127301263	chr3	+	127300873	127301021	True	NM_004526,NM_016372,NM_001136053,NM_001142646	chr3,chr3,chr3,chr3	+,-,-,-	MCM2,TPRA1,TPRA1,TPRA1	16231,-1593,8525,8597
chr6:3116942-3118571	chr6	+	3117374	3118561	True	NR_026648,NR_026649,NR_026650,NM_001069,NM_004332	chr6,chr6,chr6,chr6,chr6	+,+,+,-,+	BPHL,BPHL,BPHL,TUBB2A,BPHL	364,364,364,39276,364
chr9:95895518-95895799	chr9	+	95895565	95895765	True	NM_004148,NM_032310	chr9,chr9	-,+	NINJ1,C9orf89	855,-37166
chr12:132692256-132692509	chr12	+	132692327	132692391	True	NM_024078,NM_021808	chr12,chr12	+,-	NOC4L,GALNT9	-63385,-1754
chr1:155991588-155993472	chr1	+	155991635	155993492	True	NM_014017,NM_003145	chr1,chr1	+,-	LAMTOR2,SSR2	31024,-877
chr12:15361277-15361963	chr12	+	15361302	15361986	True	NM_002848,NM_001190726	chr12,chr12	+,-	PTPRO,RERG	113500,12475
chr9:33264997-33265213	chr9	+	33265012	33265176	True	NM_001172415,NM_001195536,NM_004323,NM_016410	chr9,chr9,chr9,chr9	-,+,-,+	BAG1,CHMP5,BAG1,CHMP5	-253,-186,-253,-186
chr7:129008652-129009551	chr7	+	129008659	129009395	True	NM_001130722,NM_001130723,NR_034053	chr7,chr7,chr7	+,+,-	AHCYL2,AHCYL2,TNPO3	6088,-748,-313432
chr19:51714968-51715278	chr19	+	51715034	51715102	True	NM_001177608,NM_145232	chr19,chr19	+,-	CD33,CTU1	13232,-103387
chr7:92201955-92203939	chr7	+	92202145	92203804	True	NR_026902,NR_034169	chr7,chr7	+,-	MGC16142,LOC728066	-34412,15950
chr16:334023-334577	chr16	+	334513	334593	True	NM_183337,NM_006849,NM_001176,NM_003834	chr16,chr16,chr16,chr16	-,+,+,-	RGS11,PDIA2,ARHGDIG,RGS11	-8599,-1446,-3958,-8599
chr17:57232407-57232645	chr17	+	57232453	57232645	True	NM_182620,NR_029842,NM_018304,NM_001100595	chr17,chr17,chr17,chr17	-,-,+,-	SKA2,MIR301A,PRR11,SKA2	205,-3871,214,205
chr16:69220083-69220665	chr16	+	69220320	69220714	True	NM_006750,NR_033227	chr16,chr16	+,-	SNTB2,CHTF8	335,-53827
chr6:84584108-84584833	chr6	+	84584299	84584884	True	NR_026669,NM_016230	chr6,chr6	-,+	SNAP91,CYB5R4	-165172,-14987
chr16:68482589-68482819	chr16	+	68482595	68482777	True	NM_133458,NM_018667	chr16,chr16	+,-	ZFP90,SMPD3	90883,-186
chr14:100708884-100709176	chr14	+	100709019	100709084	True	NM_003403,NM_001039355	chr14,chr14	+,-	YY1,SLC25A29	-3968,63826
chr3:32824502-32825210	chr3	+	32824788	32824871	True	NM_016141,NM_001039111	chr3,chr3	-,+	DYNC1LI1,TRIM71	-212422,34638
chr17:7143301-7144058	chr17	+	7143306	7143949	True	NM_203415,NM_004422,NM_007278,NM_024297	chr17,chr17,chr17,chr17	+,-,-,-	C17orf81,DVL2,GABARAP,PHF23	11422,-5443,1854,-481
chr17:72462689-72462898	chr17	+	72462699	72462911	True	NM_174892,NM_007261	chr17,chr17	-,+	CD300LB,CD300A	64752,-228
chr8:27171219-27172207	chr8	+	27171329	27172250	True	NM_173174,NM_004103,NM_171982	chr8,chr8,chr8	+,+,-	PTK2B,PTK2B,TRIM35	-2391,7668,-2495
chr16:55360385-55361523	chr16	+	55360582	55361562	True	NR_034105,NM_024335	chr16,chr16	-,+	CRNDE,IRX6	-397503,-2162
chr17:71227500-71227815	chr17	+	71227559	71227773	True	NM_032837,NM_001100621,NM_001100622,NM_001098832,NM_017941	chr17,chr17,chr17,chr17,chr17	-,+,+,-,+	FAM104A,C17orf80,C17orf80,FAM104A,C17orf80	810,1002,1002,810,1002
chr16:618792-619608	chr16	+	618932	619626	True	NM_004204,NM_145270,NM_176677,NR_024121,NM_148920	chr16,chr16,chr16,chr16,chr16	+,+,+,-,+	PIGQ,C16orf11,NHLRC4,NCRNA00235,PIGQ	377,-8561,-1951,-41525,377
chr5:130971558-130972060	chr5	+	130971576	130972076	True	NM_001164389,NM_001164388,NM_016340,NM_001164390,NM_001164386,NM_001164387,NM_020240	chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,-,-,+	RAPGEF6,RAPGEF6,RAPGEF6,RAPGEF6,RAPGEF6,RAPGEF6,CDC42SE2	-647,-647,-647,-647,-647,-647,-371925
chr19:779201-779786	chr19	+	779248	779730	True	NM_024888,NM_002819	chr19,chr19	-,+	LPPR3,PTBP1	42272,17661
chr18:55103304-55103510	chr18	+	55103315	55103541	True	NM_000140,NM_004852	chr18,chr18	-,+	FECH,ONECUT2	150478,-449
chr17:41984556-41984819	chr17	+	41984738	41984816	True	NR_026770,NM_005374	chr17,chr17	+,-	C17orf88,MPP2	9759,347
chr2:172072908-172074483	chr2	+	172073008	172074126	True	NM_001136554,NM_001164821	chr2,chr2	-,+	TLK1,DCAF17	13748,216634
chr16:87422084-87423341	chr16	+	87422148	87423350	True	NM_022818,NM_024735,NR_024568	chr16,chr16,chr16	+,-,-	MAP1LC3B,FBXO31,FBXO31	2450,-4754,2414
chr2:44497728-44498378	chr2	+	44497781	44498249	True	NM_001042385,NM_000341	chr2,chr2	-,+	PREPL,SLC3A1	88689,4347
chr16:10673391-10673886	chr16	+	10673458	10673830	True	NM_024997,NM_001424	chr16,chr16	+,-	ATF7IP2,EMP2	-150792,759
chr20:30776581-30777208	chr20	+	30776611	30777233	True	NR_002781,NM_172236	chr20,chr20	-,+	TSPY26P,POFUT1	980,18462
chr11:2399455-2399656	chr11	+	2399477	2399587	True	NM_004356,NM_014555	chr11,chr11	+,-	CD81,TRPM5	-981,44738
chr19:23731805-23732724	chr19	+	23731906	23732724	True	NM_138330,NR_003662	chr19,chr19	-,+	ZNF675,RPSAP58	137343,213091
chr17:79351294-79351510	chr17	+	79351314	79351376	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	22163,-46840
chr17:45014423-45014909	chr17	+	45014551	45014909	True	NM_203400,NM_054022	chr17,chr17	-,+	RPRML,GOSR2	41755,-14116
chr2:29046412-29046702	chr2	+	29046505	29046577	True	NM_001008779,NM_017910	chr2,chr2	+,-	SPDYA,TRMT61B	-7699,46660
chr2:234298405-234298660	chr2	+	234298480	234298654	True	NM_003648,NM_018218	chr2,chr2	+,-	DGKD,USP40	-1731,175632
chr22:36818673-36819219	chr22	+	36818744	36818955	True	NM_145343,NM_002473	chr22,chr22	+,-	APOL1,MYH9	-169678,-34681
chr22:19004086-19004515	chr22	+	19004090	19004442	True	NR_024157,NR_026651,NR_024159	chr22,chr22,chr22	-,+,+	DGCR11,DGCR10,DGCR9	31496,5694,904
chr15:78840428-78840858	chr15	+	78840601	78840881	True	NM_001166694,NM_001102668,NM_002789,NM_001102667	chr15,chr15,chr15,chr15	-,+,+,+	CHRNA3,PSMA4,PSMA4,PSMA4	72806,-7905,-7905,-7905
chr6:84419426-84420833	chr6	+	84419491	84420833	True	NR_026669,NM_014841,NM_001009994	chr6,chr6,chr6	-,-,+	SNAP91,SNAP91,RIPPLY2	-364,-364,142151
chr19:14910826-14911483	chr19	+	14910856	14911466	True	NM_032433,NM_198944	chr19,chr19	+,-	ZNF333,OR7C1	-110037,92
chr3:128880628-128882007	chr3	+	128880888	128882034	True	NM_001199469,NM_001204890,NM_016128,NM_020701	chr3,chr3,chr3,chr3	-,-,+,-	ISY1,ISY1-RAB43,COPG,ISY1	-815,-815,86418,-815
chr3:196469713-196470438	chr3	+	196469854	196470441	True	NM_032898,NM_002577	chr3,chr3	-,+	C3orf34,PAK2	-30731,-3185
chr14:104388898-104389725	chr14	+	104389340	104389509	True	NM_001127393,NM_153046,NM_004894	chr14,chr14,chr14	-,+,-	C14orf2,TDRD9,C14orf2	-1437,5307,-1437
chr7:30720592-30721452	chr7	+	30720809	30721487	True	NM_001202483,NM_001202482,NM_001199219,NM_001883	chr7,chr7,chr7,chr7	-,-,+,-	CRHR2,CRHR2,INMT,CRHR2	704,704,70263,704
chr16:57651742-57652433	chr16	+	57651864	57652274	True	NM_001145770,NM_005682,NM_033212	chr16,chr16,chr16	+,+,-	GPR56,GPR56,CCDC102A	1635,1635,-81387
chr20:43513647-43513975	chr20	+	43513732	43514004	True	NM_139323,NM_003404,NM_182970	chr20,chr20,chr20	+,+,-	YWHAB,YWHAB,RIMS4	339,339,-74820
chr12:85818906-85820082	chr12	+	85818968	85820088	True	NM_001100917,NM_006982	chr12,chr12	-,+	TSPAN19,ALX1	-388913,-144990
chr6:27980014-27981440	chr6	+	27980097	27981401	True	NM_033057,NM_012367	chr6,chr6	-,+	OR2B2,OR2B6	-99923,-55137
chr10:29186122-29186580	chr10	+	29186439	29186617	True	NR_033805,NM_012342	chr10,chr10	-,+	LOC220906,BAMBI	-365156,-220073
chr3:9596230-9597338	chr3	+	9596258	9597225	True	NM_198560,NM_001077525	chr3,chr3	-,+	LHFPL4,MTMR14	-772,93891
chr12:113589457-113590459	chr12	+	113589731	113590335	True	NM_004658,NM_001144872	chr12,chr12	-,+	RASAL1,CCDC42B	-15687,-2119
chr5:135074343-135074694	chr5	+	135074389	135074471	True	NM_145282,NR_027127	chr5,chr5	+,-	SLC25A48,LOC340074	95893,-84765
chr6:109448291-109450121	chr6	+	109448577	109450102	True	NM_014454,NM_173830	chr6,chr6	-,+	SESN1,CEP57L1	-32869,404
chr2:11604846-11605849	chr2	+	11604846	11605723	True	NM_014668,NR_003094,NR_003095,NR_003092,NR_003093,NM_198256	chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-	GREB1,E2F6,E2F6,E2F6,E2F6,E2F6	68518,624,624,624,624,624
chr7:155325238-155326012	chr7	+	155325488	155326040	True	NM_001103176,NM_001427	chr7,chr7	-,+	CNPY1,EN2	549,-74715
chr16:56670368-56671860	chr16	+	56670489	56671817	True	NR_003658,NR_036677,NM_176870,NM_005946,NM_005950,NR_027781	chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,-,+	MT1DP,MT1JP,MT1M,MT1A,MT1G,MT1DP	5898,-889,-4006,760,30214,5781
chr3:137830259-137832122	chr3	+	137830270	137832140	True	NM_014154,NM_173543,NM_001170538	chr3,chr3,chr3	+,-,-	ARMC8,DZIP1L,DZIP1L	74007,2361,232
chr20:30456757-30457785	chr20	+	30456817	30457647	True	NM_001012644,NM_177991,NM_001008409,NM_080611	chr20,chr20,chr20,chr20	-,-,+,-	DUSP15,DUSP15,TTLL9,DUSP15	204,414,857,882
chr6:34217955-34219090	chr6	+	34218028	34219013	True	NM_001008704,NM_145905,NM_178508,NM_001008703	chr6,chr6,chr6,chr6	-,+,-,-	C6orf1,HMGA1,C6orf1,C6orf1	-1124,-11511,-1124,-1124
chr19:49553946-49554531	chr19	+	49553980	49554168	True	NM_033183,NM_033043,NM_033142	chr19,chr19,chr19	-,+,-	CGB8,CGB5,CGB7	-1612,-6929,4879
chr6:151770426-151770992	chr6	+	151770528	151770732	True	NM_017909,NM_024573	chr6,chr6	-,+	RMND1,C6orf211	2634,2689
chr1:193074638-193075064	chr1	+	193074677	193075117	True	NM_197962,NM_024529,NM_016066	chr1,chr1,chr1	-,+,-	GLRX2,CDC73,GLRX2	-121,15970,181
chr13:113343093-113343516	chr13	+	113343200	113343508	True	NM_006322,NM_015205,NM_032189	chr13,chr13,chr13	-,+,+	TUBGCP3,ATP11A,ATP11A	-100719,1134,1134
chr1:144332102-144333324	chr1	+	144332785	144333353	True	NR_024584,NM_001037675,NR_024510,NR_024511	chr1,chr1,chr1,chr1	-,+,-,-	LOC728875,NBPF9,LOC728855,LOC728855	8452,281605,7470,7470
chr1:144332102-144333324	chr1	+	143736745	143736802	False	NR_033189,NR_027469,NR_027468	chr1,chr1,chr1	+,-,-	LOC100130000,LOC100286793,FLJ39739	-49673,7842,7712
chr1:144332102-144333324	chr1	+	144513034	144513602	False	NR_024584,NM_001037675	chr1,chr1	-,+	LOC728875,NBPF9	8417,101356
chr1:144332102-144333324	chr1	+	147924267	147924324	False	NM_001097616,NR_027468	chr1,chr1	+,-	GPR89C,FLJ39739	-498758,7713
chr1:144332102-144333324	chr1	-	149583869	149584151	False	NM_001024599,NR_024510	chr1,chr1	-,+	HIST2H2BF,LOC728855	-184640,-7467
chr2:87089960-87091456	chr2	+	87089965	87091485	True	NR_037931,NM_172101,NM_172102,NM_001178100,NM_172213,NM_004931	chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-	LOC100286979,CD8B,CD8B,CD8B,CD8B,CD8B	-1068,-918,-918,-918,-918,-918
chr2:87089960-87091456	chr2	-	107101217	107102905	False	NM_001144013,NR_003506	chr2,chr2	-,+	RGPD3,PLGLA	-16416,-98500
chr5:137699394-137701036	chr5	+	137700186	137700762	True	NM_022809,NM_016604	chr5,chr5	-,+	CDC25C,KDM3B	-32670,-11961
chr19:55097336-55098243	chr19	+	55097439	55098269	True	NM_006863,NM_145057	chr19,chr19	+,-	LILRA1,CDC42EP5	6843,-113017
chrX:63423281-63424086	chrX	+	63423349	63423945	True	NM_152424,NM_001010888	chrX,chrX	-,+	FAM123B,ZC3H12B	1729,1284669
chr2:71202634-71204034	chr2	+	71202916	71203860	True	NM_144582,NM_024933,NM_001115116	chr2,chr2,chr2	-,+,+	TEX261,ANKRD53,ANKRD53	18193,1714,1714
chr8:103666953-103667365	chr8	+	103667342	103667402	True	NM_024410,NM_005655,NM_001032282	chr8,chr8,chr8	+,-,-	ODF1,KLF10,KLF10	-103545,631,-1174
chr12:46384464-46385086	chr12	+	46384474	46384954	True	NM_152641,NM_004719	chr12,chr12	+,-	ARID2,SCAF11	-260905,-73
chr3:48130745-48131107	chr3	+	48130833	48131000	True	NM_004345,NM_001134364,NM_002375,NM_030885	chr3,chr3,chr3,chr3	+,-,-,-	CAMP,MAP4,MAP4,MAP4	133861,-64,-64,-64
chr3:195639286-195639619	chr3	+	195639498	195639564	True	NM_001098516,NM_005781	chr3,chr3	+,-	MUC20,TNK2	-188454,-3618
chr3:99781248-99783035	chr3	+	99781302	99783078	True	NM_001167924,NM_182909	chr3,chr3	+,-	C3orf26,FILIP1L	50695,50321
chr6:154641860-154642768	chr6	+	154641976	154642653	True	NM_001130699,NM_001145287	chr6,chr6	-,+	IPCEF1,OPRM1	8613,-234399
chr15:35591710-35592691	chr15	+	35591914	35592732	True	NR_003144,NR_037507	chr15,chr15	+,-	LOC723972,MIR3942	-62448,71883
chrX:140991961-140992666	chrX	+	140992288	140992692	True	NM_005462,NM_145665,NM_177456	chrX,chrX,chrX	+,-,+	MAGEC1,SPANXE,MAGEC3	-697,-205633,-9887
chr17:16528654-16530090	chr17	+	16528794	16529612	True	NM_020787,NM_014695	chr17,chr17	-,+	ZNF624,CCDC144A	27611,64026
chr5:159625588-159626446	chr5	+	159625750	159626408	True	NM_001130864,NM_001040442	chr5,chr5	-,+	PWWP2A,FABP6	-79298,26
chr19:36249091-36249304	chr19	+	36249106	36249300	True	NM_019104,NM_001039887,NM_144617	chr19,chr19,chr19	+,+,-	LIN37,C19orf55,HSPB6	-9645,-113,-1176
chr19:16940019-16940268	chr19	+	16940070	16940132	True	NM_024104,NM_015260	chr19,chr19	-,+	C19orf42,SIN3B	-169102,85
chr8:98880336-98880560	chr8	+	98880426	98880523	True	NR_002581,NM_030583,NM_002380	chr8,chr8,chr8	-,+,+	SNORA72,MATN2,MATN2	173973,787,787
chrX:69510214-69510414	chrX	+	69510314	69510446	True	NM_016484,NM_012310,NM_001032726	chrX,chrX,chrX	-,+,+	PDZD11,KIF4A,RAB41	-516,-486,-8343
chr11:27367004-27367865	chr11	+	27367568	27367705	True	NR_002832,NM_030771	chr11,chr11	+,-	BDNF-AS1,CCDC34	160693,17143
chr17:77730013-77730424	chr17	+	77730023	77730339	True	NM_020649,NM_032647	chr17,chr17	-,+	CBX8,CBX2	40626,21637
chr9:19249409-19250890	chr9	+	19249572	19250152	True	NR_038064,NM_017925	chr9,chr9	-,+	PLIN2,DENND4C	-121968,40596
chr12:122105454-122106987	chr12	+	122105555	122106959	True	NM_173855,NM_032790	chr12,chr12	-,+	MORN3,ORAI1	651,-41151
chr6:27832799-27833196	chr6	+	27832911	27833157	True	NM_003546,NM_003511,NM_003533,NM_005322	chr6,chr6,chr6,chr6	-,+,-,-	HIST1H4L,HIST1H2AL,HIST1H3I,HIST1H1B	8182,19,6992,2252
chr21:46027087-46028571	chr21	+	46027594	46028591	True	NM_198695,NM_198689,NM_198688	chr21,chr21,chr21	+,+,-	KRTAP10-8,KRTAP10-7,KRTAP10-6	3404,-7149,-15208
chr6:34666456-34667417	chr6	+	34666531	34667094	True	NM_022758,NM_024294,NM_003093	chr6,chr6,chr6	-,-,+	C6orf106,C6orf106,SNRPC	-1906,-1906,57776
chr14:88459740-88460076	chr14	+	88459754	88460076	True	NM_001037525,NM_001201402,NM_001201401,NM_000153,NM_003608	chr14,chr14,chr14,chr14,chr14	-,-,-,-,+	GALC,GALC,GALC,GALC,GPR65	-139,7,-139,-139,11391
chr5:151279877-151281642	chr5	+	151279887	151281603	True	NM_198395,NM_000171	chr5,chr5	+,-	G3BP1,GLRA1	-128462,22845
chr14:23298193-23299093	chr14	+	23298422	23299022	True	NM_004995,NM_181304,NM_181305,NM_181306,NM_181307,NM_180982,NM_001126106,NM_178336	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,+,+,+,-,+	MMP14,MRPL52,MRPL52,MRPL52,MRPL52,MRPL52,SLC7A7,MRPL52	6770,69,69,69,69,69,-9408,69
chr14:94937565-94938706	chr14	+	94937567	94938723	True	NM_006215,NM_001042518,NM_175739	chr14,chr14,chr14	+,-,-	SERPINA4,SERPINA9,SERPINA9	89059,3997,3997
chr15:59667410-59668076	chr15	+	59667538	59667953	True	NM_152450,NM_004998	chr15,chr15	+,-	FAM81A,MYO1E	62418,-2467
chr1:26440423-26442214	chr1	+	26440433	26442013	True	NR_026685,NR_026686,NM_032588,NM_152835	chr1,chr1,chr1,chr1	+,+,-,+	PDIK1L,PDIK1L,TRIM63,PDIK1L	-2828,-2216,-46312,-2216
chr8:119608997-119610015	chr8	+	119609000	119609936	True	NM_006438,NM_001101676	chr8,chr8	+,-	COLEC10,SAMD12	469487,24298
chr9:88554196-88555844	chr9	+	88554348	88555801	True	NM_024635,NM_016548	chr9,chr9	+,-	NAA35,GOLM1	255,158759
chr12:6484014-6484217	chr12	+	6484035	6484265	True	NM_001159576,NM_002342,NM_001159575,NM_001038	chr12,chr12,chr12,chr12	-,+,-,-	SCNN1A,LTBR,SCNN1A,SCNN1A	175,9091,2308,690
chr4:41626438-41626762	chr4	+	41626479	41626779	True	NM_001112720,NM_003924	chr4,chr4	+,-	LIMCH1,PHOX2B	-11611,124258
chr7:99064969-99065308	chr7	+	99064974	99065188	True	NM_213603,NM_001198879,NM_001003714,NM_001039178,NM_001003713,NM_001013258,NM_004889	chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,-,-,-,-,+,-	ZNF789,ATP5J2-PTCD1,ATP5J2,ATP5J2,ATP5J2,ZNF789,ATP5J2	5326,-1150,-1150,-1150,-1150,5326,-1150
chr1:175043725-175044524	chr1	+	175043787	175044215	True	NR_037606,NM_022093	chr1,chr1	-,+	MRPS14,TNN	-51196,-6845
chr20:34701082-34701625	chr20	+	34701144	34701557	True	NM_177996,NR_027451	chr20,chr20	+,-	EPB41L1,LOC647979	-854,-62262
chr18:61552264-61553556	chr18	+	61552294	61553535	True	NM_002575,NM_001143818,NM_006919	chr18,chr18,chr18	+,+,-	SERPINB2,SERPINB2,SERPINB3	1403,1403,-223097
chr1:38058766-38059394	chr1	+	38058868	38059422	True	NM_013285,NM_003462	chr1,chr1	-,+	GNL2,DNALI1	2214,-36407
chr6:35891146-35891816	chr6	+	35891291	35891616	True	NR_034069,NM_139013,NM_003137	chr6,chr6,chr6	-,+,-	SRPK1,MAPK14,SRPK1	-2334,103837,-2334
chr13:73387002-73388295	chr13	+	73387234	73388202	True	NM_006346,NM_014953	chr13,chr13	+,-	PIBF1,DIS3	-31068,-30890
chr19:58239527-58239991	chr19	+	58239556	58239992	True	NM_173632,NM_024833	chr19,chr19	+,-	ZNF776,ZNF671	18171,-561
chr10:75900099-75900885	chr10	+	75900108	75900569	True	NM_001202450,NM_012095	chr10,chr10	+,-	ADK,AP3M1	10373,10307
chr19:53498094-53498536	chr19	+	53498378	53498496	True	NM_152473,NR_003578	chr19,chr19	+,-	HERV-V1,ZNF702P	18847,-1594
chr15:65579471-65581160	chr15	+	65579729	65581015	True	NM_001101362,NM_017851	chr15,chr15	+,-	KBTBD13,PARP16	-210626,-711
chr18:44335523-44335980	chr18	+	44335576	44335937	True	NM_013305,NM_031303	chr18,chr18	-,+	ST8SIA5,KATNAL2	1152,190849
chr8:38759845-38760700	chr8	+	38760096	38760723	True	NM_021623,NM_001024380	chr8,chr8	+,-	PLEKHA2,TM2D2	-1402,93368
chr14:92220444-92221296	chr14	+	92220473	92221161	True	NM_024764,NM_017437	chr14,chr14	-,+	CATSPERB,CPSF2	-22060,367136
chr17:79880323-79880562	chr17	+	79880459	79880531	True	NM_016538,NM_002359,NR_015454,NM_032711	chr17,chr17,chr17,chr17	-,-,+,-	SIRT7,MAFG,LOC92659,MAFG	-4401,5107,5173,927
chr10:79689091-79689456	chr10	+	79689100	79689355	True	NR_024585,NM_004747	chr10,chr10	+,-	LOC100128292,DLG5	-2581,-2752
chr5:145894832-145895162	chr5	+	145894930	145895170	True	NM_006706,NM_194251	chr5,chr5	+,-	TCERG1,GPR151	-68114,556
chr8:56963337-56965171	chr8	+	56963571	56964874	True	NM_001011667,NR_002437	chr8,chr8	+,-	CHCHD7,SNORD54	159440,21636
chr16:65155513-65155856	chr16	+	65155607	65155839	True	NM_001795,NM_001797	chr16,chr16	+,-	CDH5,CDH11	1244685,130
chr1:44440193-44440424	chr1	+	44440195	44440455	True	NM_001384,NM_001005417,NM_001039457,NM_003780,NM_004047,NM_001039589,NM_006934	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,+,-	DPH2,B4GALT2,ATP6V0B,B4GALT2,ATP6V0B,DPH2,SLC6A9	-4593,5727,146,4410,146,-4593,42592
chr11:95523083-95523355	chr11	+	95523189	95523403	True	NM_144664,NM_014679	chr11,chr11	-,+	FAM76B,CEP57	-235,238
chr21:47706599-47707408	chr21	+	47706612	47707107	True	NM_003906,NM_001006114,NM_058181	chr21,chr21,chr21	-,+,+	MCM3AP,YBEY,YBEY	-1376,-398,-398
chr1:36042790-36043371	chr1	+	36042922	36043288	True	NM_178548,NM_024874	chr1,chr1	+,-	TFAP2E,KIAA0319L	-4002,-19885
chr12:56656337-56657008	chr12	+	56656763	56656862	True	NM_173595,NM_144576,NM_001099337	chr12,chr12,chr12	-,+,+	ANKRD52,COQ10A,COQ10A	-4620,3779,4204
chr3:129141258-129142325	chr3	+	129141478	129142086	True	NM_018262,NM_207307	chr3,chr3	+,-	IFT122,C3orf25	16881,5458
chr1:155050607-155051224	chr1	+	155050624	155051158	True	NM_144622,NM_004952	chr1,chr1	-,+	DCST2,EFNA3	-44367,189
chr16:19315430-19315744	chr16	+	19315434	19315722	True	NR_024436,NM_016641	chr16,chr16	+,-	LOC728276,GDE1	-18380,217786
chr2:119982189-119982940	chr2	+	119982315	119982977	True	NM_182528,NM_001008410,NM_018234,NM_182915	chr2,chr2,chr2,chr2	-,+,+,+	C1QL2,STEAP3,STEAP3,STEAP3	-65844,-994,-994,-994
chr7:92144328-92145455	chr7	+	92144482	92145465	True	NM_000466,NM_032120	chr7,chr7	-,+	PEX1,C7orf64	12430,12621
chr16:85059307-85060820	chr16	+	85059636	85060836	True	NM_017740,NM_014732	chr16,chr16	-,+	ZDHHC7,KIAA0513	-14495,573
chr13:60979352-60980390	chr13	+	60979703	60980417	True	NM_001042517,NM_030794,NM_001146071,NM_001146070	chr13,chr13,chr13,chr13	-,+,+,+	DIAPH3,TDRD3,TDRD3,TDRD3	-241584,-9163,-9163,-8327
chr3:182971059-182971497	chr3	+	182971084	182971466	True	NM_032047,NM_014398	chr3,chr3	+,-	B3GNT5,LAMP3	-103,-90417
chr20:33263098-33264339	chr20	+	33263123	33264327	True	NM_080476,NM_021202	chr20,chr20	-,+	PIGU,TP53INP2	812,27820
chr20:3453265-3455208	chr20	+	3453392	3454760	True	NM_139321,NM_001009984,NM_139322	chr20,chr20,chr20	+,-,+	ATRN,C20orf194,ATRN	-1778,-65137,-1778
chr2:26625137-26625754	chr2	+	26625289	26625683	True	NM_153835,NM_145038	chr2,chr2	-,+	GPR113,CCDC164	-55604,-556
chr11:14994177-14994658	chr11	+	14994216	14994514	True	NM_000728,NM_001033953,NM_001033952,NM_001741	chr11,chr11,chr11,chr11	+,-,-,-	CALCB,CALCA,CALCA,CALCA	100631,-384,-384,-384
chr1:13035905-13037882	chr1	+	13036449	13037883	True	NM_001100631,NM_001010889	chr1,chr1	+,-	PRAMEF22,PRAMEF6	-957,-29043
chr1:13035905-13037882	chr1	+	13141356	13141994	False	NM_001100631,NM_001013407	chr1,chr1	+,-	PRAMEF22,PRAMEF5	-105864,-23605
chr1:13035905-13037882	chr1	-	13329330	13330764	False	NM_001013407,NM_001100631,NM_001013692	chr1,chr1,chr1	+,-,-	PRAMEF5,PRAMEF22,PRAMEF3	29054,957,978
chr16:27897615-27898484	chr16	+	27897786	27898216	True	NM_015202,NM_144675	chr16,chr16	+,-	KIAA0556,GSG1L	-336369,1312
chr9:124061631-124061935	chr9	+	124061635	124061915	True	NM_004099,NM_000177	chr9,chr9	-,+	STOM,GSN	70680,163
chr7:56019847-56020145	chr7	+	56019936	56020102	True	NM_015969,NM_207366	chr7,chr7	+,-	MRPS17,SEPT14	-376,-89454
chr5:68526346-68526923	chr5	+	68526873	68526933	True	NM_176816,NM_001799	chr5,chr5	-,+	CCDC125,CDK7	89527,3688
chr1:179265258-179266754	chr1	+	179265439	179266799	True	NM_001136001,NM_003101	chr1,chr1	-,+	ABL2,SOAT1	-66620,-2474
chr7:35293086-35293449	chr7	+	35293111	35293407	True	NM_001166220,NM_001077653,NM_001011553	chr7,chr7,chr7	-,-,+	TBX20,TBX20,SEPT7	354,354,547219
chr2:68478612-68478926	chr2	+	68478770	68478946	True	NM_000945,NM_020143	chr2,chr2	-,+	PPP3R1,PNO1	755,-93824
chr19:46320587-46320935	chr19	+	46320840	46320958	True	NM_030785,NM_004497	chr19,chr19	-,+	RSPH6A,FOXA3	-2235,46559
chr4:2822673-2823266	chr4	+	2822770	2823124	True	NM_001145855,NM_001145856,NM_024309,NM_003023	chr4,chr4,chr4,chr4	+,+,-,+	SH3BP2,SH3BP2,TNIP2,SH3BP2	-8875,-2909,-64667,-2280
chrX:49593983-49595600	chrX	+	49594139	49595422	True	NM_007003,NR_026742	chrX,chrX	+,-	PAGE4,LOC158572	-284,48592
chr10:44101411-44101865	chr10	+	44101414	44101738	True	NM_001099284,NM_145312	chr10,chr10	-,+	ZNF239,ZNF485	-31348,116
chr2:235407151-235408136	chr2	+	235407210	235408164	True	NM_006944,NM_005737	chr2,chr2	+,-	SPP2,ARL4C	-447915,-1517
chr12:26119400-26121366	chr12	+	26120060	26121152	True	NM_001164748,NM_007211,NM_001164747,NR_036188	chr12,chr12,chr12,chr12	+,+,+,-	RASSF8,RASSF8,RASSF8,MIR4302	-8160,-8160,5535,-93048
chr20:48558650-48559346	chr20	+	48558851	48559097	True	NM_006038,NM_018683	chr20,chr20	-,+	SPATA2,RNF114	-26771,-6003
chr1:63941494-63942033	chr1	+	63941743	63942073	True	NM_032437,NM_014288	chr1,chr1	+,-	EFCAB7,ITGB3BP	46939,46820
chr7:75831539-75831817	chr7	+	75831544	75831776	True	NM_001110199,NM_016086	chr7,chr7	+,-	SRRM3,STYXL1	-379,-154223
chr12:100653989-100654813	chr12	+	100654183	100654384	True	NM_017988,NM_152317	chr12,chr12	+,-	SCYL2,DEPDC4	7164,6523
chr17:4833833-4834515	chr17	+	4834103	4834510	True	NM_000173,NM_001165417,NM_015528,NM_003562,NM_001165418	chr17,chr17,chr17,chr17,chr17	+,-,+,-,-	GP1BA,SLC25A11,RNF167,SLC25A11,SLC25A11	1081,9003,9119,9003,9003
chr10:97454064-97454490	chr10	+	97454063	97454516	True	NM_001143973,NM_001098175,NM_015631	chr10,chr10,chr10	-,+,-	TCTN3,ENTPD1,TCTN3	-163,17019,-163
chr14:57272242-57272961	chr14	+	57272329	57273009	True	NM_021728,NM_172337,NR_029385	chr14,chr14,chr14	-,-,+	OTX2,OTX2,OTX2OS1	4230,16,6891
chr14:20112293-20112495	chr22	+	16379982	16380180	False	NM_001005239,NR_001591	chr22,chr22	-,+	OR11H1,psiTPTE22	69674,702620
chr14:20112293-20112495	chr14	+	20112342	20112540	True	NM_001197287,NM_172194	chr14,chr14	-,+	OR11H2,OR4Q3	70001,103046
chr14:20112293-20112495	chr14	-	19453138	19453574	False	NM_001145442,NM_001013354	chr14,chr14	-,+	POTEM,OR11H12	567008,-75721
chr11:117103934-117104137	chr11	+	117103954	117104058	True	NM_004716,NM_207343,NM_001077239	chr11,chr11,chr11	-,+,+	PCSK7,RNF214,RNF214	-1143,-601,-553
chrX:68003443-68003668	chrX	+	68003466	68003652	True	NM_002547,NM_004429	chrX,chrX	-,+	OPHN1,EFNB1	-350167,45187
chr14:94981694-94982123	chr14	+	94981844	94982144	True	NM_173850,NM_006215	chr14,chr14	-,+	SERPINA12,SERPINA4	2087,45638
chr12:123834183-123835475	chr12	+	123834807	123835351	True	NM_018183,NM_020382,NM_001167856	chr12,chr12,chr12	-,+,-	SBNO1,SETD8,SBNO1	75,33352,75
chr9:97488278-97488865	chr9	+	97488400	97488807	True	NM_001127628,NM_032823,NM_001193331	chr9,chr9,chr9	-,+,+	FBP1,C9orf3,C9orf3	-85869,143,143
chr1:207098174-207098971	chr1	+	207098233	207098951	True	NM_005449,NM_001142473,NM_006850,NM_001193338	chr1,chr1,chr1,chr1	-,-,+,-	FAIM3,FAIM3,IL24,FAIM3	-2855,-2855,-27497,-2998
chr11:60971098-60971529	chr11	+	60971116	60971566	True	NM_001079807,NM_017966	chr11,chr11	+,-	PGA3,VPS37C	-183,-42200
chr11:60971098-60971529	chr11	+	60989952	60990402	False	NM_017966,NM_001079808	chr11,chr11	-,+	VPS37C,PGA4	-61036,-182
chr11:60971098-60971529	chr11	+	61008778	61009228	False	NM_014224,NM_152718	chr11,chr11	+,-	PGA5,VWCE	-185,53610
chr13:103345777-103346732	chr13	+	103345855	103346731	True	NM_003291,NM_001010977	chr13,chr13	+,-	TPP2,METTL21C	-96631,173
chr9:46291349-46292039	chr9	+	46291816	46291896	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2661086,395669
chr9:46291349-46292039	chr9	+	67700740	67700820	False	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	93421,225940
chr9:46291349-46292039	chr9	-	45091322	45091402	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-101139,-1460592
chr9:46291349-46292039	chr9	-	46212384	46212464	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2581654,475101
chr2:55920709-55920916	chr2	+	55920722	55920870	True	NM_080667,NM_033109	chr2,chr2	+,-	CCDC104,PNPT1	-174033,191
chr22:27040365-27041071	chr22	+	27040557	27041086	True	NR_003491,NM_001887	chr22,chr22	+,-	MIAT,CRYBB1	12359,-26566
chr1:13515161-13516191	chr1	+	13515240	13516186	True	NM_001100114,NM_001099852,NM_001099850	chr1,chr1,chr1	+,+,-	PRAMEF21,PRAMEF20,PRAMEF18	5776,-41,-37671
chr1:13515161-13516191	chr1	+	13736080	13737027	False	NM_001100114,NM_001099852,NM_001099850	chr1,chr1,chr1	+,+,-	PRAMEF21,PRAMEF20,PRAMEF18	5774,-41,-37675
chr12:25212376-25214222	chr12	+	25212654	25213947	True	NM_001101339,NM_006152,NM_001204126,NM_001204127	chr12,chr12,chr12,chr12	-,+,+,+	C12orf77,LRMP,LRMP,LRMP	-62281,-7532,-7532,-7532
chr2:23657114-23658881	chr2	+	23657357	23658895	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	491089,-49111
chr3:169489812-169490066	chr3	+	169489821	169490017	True	NM_001185119,NM_001185118,NM_032487,NM_018657,NR_033702,NR_001566,NR_033703	chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,-,+,+,-,+	MYNN,MYNN,ARPM1,MYNN,MYNN,TERC,MYNN	2035,835,-2138,835,835,-6973,835
chr12:6950805-6951432	chr12	+	6950846	6951397	True	NM_003481,NM_001098536,NM_002075,NM_031299	chr12,chr12,chr12,chr12	+,+,+,-	USP5,USP5,GNB3,CDCA3	9893,9887,-1522,9110
chr14:56254612-56255403	chr14	+	56254797	56255219	True	NR_026796,NR_026797,NR_004844	chr14,chr14,chr14	-,-,+	C14orf34,C14orf34,RPL13AP3	8223,8223,-21893
chr9:131445680-131446017	chr9	+	131445697	131445995	True	NM_052844,NM_001122821,NM_003011	chr9,chr9,chr9	-,+,+	WDR34,SET,SET	-26568,22,5513
chr10:90201722-90203187	chr10	+	90201755	90203039	True	NM_018363,NM_001010939	chr10,chr10	-,+	RNLS,LIPJ	140100,143479
chr10:43952616-43953190	chr10	+	43953024	43953206	True	NR_026693,NM_001098204	chr10,chr10	+,-	ZNF487P,HNRNPF	-20501,-48328
chr17:26219085-26219951	chr17	+	26219390	26219952	True	NM_001076680,NM_016231	chr17,chr17	-,+	C17orf108,NLK	507,149735
chr10:105130377-105130717	chr10	+	105130416	105130719	True	NM_006951,NM_032154	chr10,chr10	+,-	TAF5,PCGF6	-2744,-19525
chr10:127464297-127465011	chr10	+	127464448	127465055	True	NM_147191,NM_078468	chr10,chr10	-,+	MMP21,BCCIP	-58,47048
chr18:33076022-33077765	chr18	+	33076347	33077533	True	NM_001098817,NM_020474,NM_194281	chr18,chr18,chr18	-,+,-	INO80C,GALNT1,INO80C	472,156999,472
chr22:18777591-18778885	chr22	+	18778314	18778864	True	NM_005675,NR_003267	chr22,chr22	+,-	DGCR6,GGT3P	114871,660
chr22:18777591-18778885	chr22	-	25007143	25007193	False	NM_005265,NM_207644,NM_001032365,NM_001032364	chr22,chr22,chr22,chr22	+,-,+,+	GGT1,C22orf36,GGT1,GGT1	-8014,-18108,-3568,-8070
chr22:18777591-18778885	chr22	+	21579422	21579479	False	NR_024583,NR_002829	chr22,chr22	+,-	POM121L8P,P2RX6P	57234,-180884
chr1:153602006-153602941	chr1	+	153602279	153602895	True	NM_015607,NM_001024211,NM_001024212,NM_001024213,NM_006271,NM_001024210,NM_005979	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,-,+,-,-	CHTOP,S100A13,S100A13,S100A13,S100A1,S100A13,S100A13	3629,-2162,-2535,-2755,-1457,3723,-1564
chrX:109661794-109662427	chrX	+	109661890	109662358	True	NM_020769,NM_001171689	chrX,chrX	+,-	RGAG1,AMMECR1	-6,21153
chrX:18690723-18691803	chrX	+	18690772	18691184	True	NM_000330,NM_006240	chrX,chrX	-,+	RS1,PPEF1	-549,17860
chr10:6336507-6338326	chr10	+	6336643	6338274	True	NM_004566,NM_000417	chr10,chr10	+,-	PFKFB3,IL2RA	-91854,-232310
chr5:173003453-173004338	chr5	+	173003598	173004326	True	NR_027108,NR_027109,NM_001159651	chr5,chr5,chr5	+,+,-	LOC285593,LOC285593,BOD1	2319,2330,39390
chr10:118895691-118895974	chr10	+	118895731	118896001	True	NM_001112704,NM_199131,NM_181840	chr10,chr10,chr10	-,-,+	VAX1,VAX1,KCNK18	1861,1861,60998
chr9:70485161-70486395	chr9	+	70485357	70486177	True	NM_001024916,NM_201453	chr9,chr9	-,-	CBWD5,CBWD3	4052,4058
chr9:70485161-70486395	chr9	+	69258548	69258606	False	NM_001085457,NM_001098805	chr9,chr9	-,+	CBWD6,ANKRD20A4	4045,123374
chr9:70485161-70486395	chr9	-	70860828	70860886	False	NR_015423,NM_201453	chr9,chr9	-,+	LOC572558,CBWD3	111929,-4048
chr2:131974838-131975207	chr2	+	131974949	131975252	True	NM_001009993,NM_001083538	chr2,chr2	-,+	FAM168B,POTEE	-123945,671
chr2:131974838-131975207	chr2	-	130878782	130879084	False	NM_001099771,NR_033903	chr2,chr2	-,+	POTEF,LOC285103	7761,8111
chr16:21513818-21514346	chr16	+	21513914	21514036	True	NM_001077180,NR_027155	chr16,chr16	+,-	METTL9,LOC100271836	96819,-312
chr2:42991557-42991868	chr2	+	42991672	42991886	True	NM_148962,NM_020744	chr2,chr2	-,+	OXER1,MTA3	-271,-196052
chr1:180469750-180471324	chr1	+	180470042	180471308	True	NM_001135669,NM_032360	chr1,chr1	+,-	XPR1,ACBD6	129837,764
chr10:5148662-5149765	chr10	+	5148992	5149810	True	NM_003739,NR_027916	chr10,chr10	+,-	AKR1C3,AKR1CL1	-12483,77390
chr1:57284529-57285154	chr1	+	57284574	57285076	True	NM_000562,NM_001004303	chr1,chr1	+,-	C8A,C1orf168	35366,343
chr14:39873823-39874157	chr14	+	39873834	39874027	True	NM_203355,NM_203301	chr14,chr14	+,-	CTAGE5,FBXO33	-137563,27738
chr12:120874440-120874913	chr12	+	120874580	120874723	True	NM_016399,NM_004373,NM_176818,NR_033684	chr12,chr12,chr12,chr12	-,+,+,+	TRIAP1,COX6A1,GATC,GATC	9551,1180,9517,9517
chr20:30130804-30131179	chr20	+	30130809	30131073	True	NM_001037500,NR_003677	chr20,chr20	-,+	DEFB124,PSIMCT-1	-69993,4111
chrX:101720112-101721038	chrX	+	101720274	101720937	True	NM_017809,NR_002216,NM_001099686	chrX,chrX,chrX	-,+,-	NXF2,NXF4,NXF2B	5852,83955,5852
chrX:101720112-101721038	chrX	-	101476086	101476749	False	NM_001012978,NM_017809,NM_001099686	chrX,chrX,chrX	-,+,+	BEX5,NXF2,NXF2B	-65100,-5864,-5864
chr9:140082939-140083162	chr9	+	140082963	140083103	True	NM_003731,NM_013366	chr9,chr9	+,-	SSNA1,ANAPC2	-26,4
chr3:119013003-119013370	chr3	+	119013015	119013309	True	NM_212543,NM_020754	chr3,chr3	-,+	B4GALT4,ARHGAP31	-53263,0
chr4:178363317-178363564	chr4	+	178363394	178363594	True	NR_033655,NM_000027,NM_018248,NM_001171988	chr4,chr4,chr4,chr4	-,-,+,-	AGA,AGA,NEIL3,AGA	113,113,-132454,113
chr15:41169467-41170338	chr15	+	41169631	41170293	True	NM_020857,NM_133639	chr15,chr15	+,-	VPS18,RHOV	16334,-3144
chr12:123757534-123757915	chr12	+	123757548	123757932	True	NM_001143905,NM_004642	chr12,chr12	+,-	C12orf65,CDK2AP1	-39308,-861
chr16:29985824-29986200	chr16	+	29986000	29986244	True	NM_004783,NM_016151,NM_003609	chr16,chr16,chr16	+,+,-	TAOK2,TAOK2,HIRIP3	-829,-829,21218
chr3:45726330-45727585	chr3	+	45726544	45727266	True	NM_014016,NR_033947	chr3,chr3	+,-	SACM1L,LOC644714	3487,3165
chr17:3538907-3539328	chr17	+	3538910	3539280	True	NM_004937,NM_001031681,NM_013276	chr17,chr17,chr17	+,+,-	CTNS,CTNS,SHPK	481,481,386
chr22:36554021-36554721	chr22	+	36554183	36554585	True	NM_145641,NM_145640,NM_145642,NM_001136540,NR_027833,NR_027834,NR_027835	chr22,chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,+,-,-,-	APOL3,APOL3,APOL3,APOL1,APOL3,APOL3,APOL3	7690,2442,7690,94531,2442,2442,2442
chr19:45311096-45311753	chr19	+	45311150	45311790	True	NM_001013257,NM_005581,NR_027754	chr19,chr19,chr19	+,+,-	BCAM,BCAM,CEACAM22P	547,547,-251000
chr1:79473557-79473849	chr1	+	79473624	79473892	True	NM_022159,NM_006417	chr1,chr1	-,+	ELTD1,IFI44	-1129,-358212
chr21:36418945-36419282	chr21	+	36418944	36419328	True	NR_024351,NR_026812,NM_001754	chr21,chr21,chr21	+,-,-	NCRNA00160,C21orf96,RUNX1	-322893,-7221,2317
chr2:32505744-32506812	chr2	+	32505832	32506659	True	NM_032312,NM_021209	chr2,chr2	+,-	YIPF4,NLRC4	-2927,-15020
chr16:51186617-51186817	chr16	+	51186651	51186777	True	NM_002968,NM_001042412,NM_001127892	chr16,chr16,chr16	-,+,-	SALL1,CYLD,SALL1	-1468,-410673,-2143
chr12:56510375-56510865	chr12	+	56510379	56510909	True	NM_032786,NM_001035267,NM_001130420,NM_021104	chr12,chr12,chr12,chr12	+,+,-,+	ZC3H10,RPL41,SMARCC2,RPL41	1120,-56,72500,-56
chr2:213950644-213951289	chr2	+	213950672	213951326	True	NM_016260,NM_001025436	chr2,chr2	-,+	IKZF2,SPAG16	63783,197789
chr1:119682313-119682898	chr1	+	119682389	119682872	True	NM_001005783,NM_201263,NM_015836	chr1,chr1,chr1	+,-,-	HAO2,WARS2,WARS2	228529,480,480
chr6:158960562-158960866	chr6	+	158960591	158960895	True	NM_006519,NM_020823	chr6,chr6	-,+	DYNLT1,TMEM181	104959,-3174
chr5:134095568-134096712	chr5	+	134095672	134096389	True	NM_014829,NM_016103	chr5,chr5	+,-	DDX46,SAR1B	-1269,-127139
chr9:131791293-131791715	chr9	+	131791459	131791737	True	NM_020145,NM_032809	chr9,chr9	-,+	SH3GLB2,FAM73B	-880,7515
chr18:76741268-76742736	chr18	+	76741519	76742769	True	NM_001146343,NM_171999	chr18,chr18	-,+	PQLC1,SALL3	968934,-1295
chr5:173163123-173163338	chr5	+	173163311	173163383	True	NM_030627,NM_138369	chr5,chr5	+,-	CPEB4,BOD1	151947,-119645
chrY:23969738-23971343	chrY	+	23969756	23971234	True	NM_001006120,NM_001006118	chrY,chrY	+,-	RBMY1D,RBMY1E	-273004,69449
chr8:99127912-99128765	chr8	+	99127931	99128697	True	NM_015029,NM_001145861,NM_001145860,NM_005836	chr8,chr8,chr8,chr8	+,+,+,-	POP1,POP1,POP1,HRSP12	1370,823,823,781
chr3:46733473-46734321	chr3	+	46733482	46734296	True	NM_001190707,NM_147196,NR_033815,NM_147129	chr3,chr3,chr3,chr3	-,+,-,-	ALS2CL,TMIE,ALS2CL,ALS2CL	900,8526,948,948
chr16:620313-620556	chr16	+	620312	620408	True	NM_004204,NM_145270,NM_176677,NR_024121,NM_148920	chr16,chr16,chr16,chr16,chr16	+,+,+,-,+	PIGQ,C16orf11,NHLRC4,NCRNA00235,PIGQ	-359,-9941,-3331,-42905,-359
chr1:32401517-32401894	chr1	+	32401664	32401786	True	NM_006559,NM_080391	chr1,chr1	+,-	KHDRBS1,PTP4A2	77704,2256
chr18:55862834-55863993	chr18	+	55862959	55864028	True	NM_001144970,NM_005603	chr18,chr18	+,-	NEDD4L,ATP8B1	-373,-392632
chr1:63788446-63788739	chr1	+	63788448	63788786	True	NM_012183,NM_014288	chr1,chr1	+,-	FOXD3,ITGB3BP	-57,200099
chr6:157096293-157097954	chr6	+	157096373	157097757	True	NM_020732,NM_018452,NM_017519	chr6,chr6,chr6	+,-,+	ARID1B,C6orf35,ARID1B	1306,647546,1306
chr6:106553914-106554697	chr6	+	106554028	106554494	True	NM_182907,NM_004849	chr6,chr6	+,-	PRDM1,ATG5	-7264,219251
chr10:90758169-90758632	chr10	+	90758169	90758477	True	NR_028035,NR_028034,NR_028036,NM_000043,NR_028033,NM_152871,NR_028371,NM_001141945,NM_152872	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,+,-,-,+	FAS,FAS,FAS,FAS,FAS,FAS,FAS-AS1,ACTA2,FAS	-7937,-7937,-7937,-7937,-7937,-7937,-5437,-7022,-7937
chr14:77228641-77229094	chr14	+	77228907	77229095	True	NM_015305,NM_014909	chr14,chr14	-,+	ANGEL1,VASH1	50238,-723
chr1:45309156-45309377	chr1	+	45309161	45309227	True	NM_003738,NM_001166292,NM_001136537	chr1,chr1,chr1	-,-,+	PTCH2,PTCH2,BTBD19	-545,-545,-35058
chr1:196635030-196635296	chr1	+	196635041	196635331	True	NM_198503,NM_000186	chr1,chr1	-,+	KCNT2,CFH	-57542,-14092
chr17:38601674-38602587	chr17	+	38601837	38602313	True	NM_001552,NM_001067	chr17,chr17	+,-	IGFBP4,TOP2A	-2212,-27635
chr18:3353657-3354193	chr18	+	3353950	3354240	True	NM_019856,NM_174886	chr18,chr18	-,+	MYOM1,TGIF1	-133844,57831
chr14:65571255-65572158	chr14	+	65571414	65572008	True	NM_002028,NM_197957,NM_145113,NM_145112,NM_145114,NM_145116,NM_002382	chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,-,-,-,-,-,-	FNTB,MAX,MAX,MAX,MAX,MAX,MAX	-117959,-2187,-2187,-2187,-2187,-2187,-2187
chr4:24800049-24800955	chr4	+	24800057	24800913	True	NM_001130726,NM_003102	chr4,chr4	-,+	CCDC149,SOD3	113737,-3023
chr12:8378458-8379692	chr12	+	8378591	8379224	True	NM_018088,NR_026788	chr12,chr12	-,+	FAM90A1,FAM66C	1040,-45839
chr16:14162225-14162761	chr16	+	14162303	14162803	True	NM_014048,NM_001134477	chr16,chr16	+,-	MKL2,PARN	2392,561367
chrX:118740374-118741056	chrX	+	118740410	118741092	True	NM_001173487,NM_181777,NM_017544	chrX,chrX,chrX	-,+,-	NKRF,UBE2A,NKRF	-564,-26163,-564
chr6:18263880-18264138	chr6	+	18263923	18264176	True	NM_001134709,NM_153042,NM_003472	chr6,chr6,chr6	-,+,-	DEK,KDM1B,DEK	673,-108355,673
chr19:46271417-46271667	chr19	+	46271444	46271576	True	NM_175875,NM_017659	chr19,chr19	-,+	SIX5,QPCTL	971,-75754
chr17:4677429-4677922	chr17	+	4677522	4677924	True	NM_001144939,NM_003963	chr17,chr17	-,+	VMO1,TM4SF5	11855,-2386
chr19:49618314-49618550	chr19	+	49618418	49618580	True	NM_022165,NM_003660,NM_018111	chr19,chr19,chr19	+,+,-	LIN7B,PPFIA3,C19orf73	-851,4082,3867
chr2:176996258-176997376	chr2	+	176996522	176997406	True	NM_014213,NM_001080458,NM_001199747,NM_001199746,NM_019558	chr2,chr2,chr2,chr2,chr2	+,-,+,+,+	HOXD9,EVX2,HOXD8,HOXD8,HOXD8	-9160,-47832,-2151,-2105,-2105
chr19:36504719-36505013	chr19	+	36504872	36505006	True	NM_198867,NM_032878,NM_001039876,NM_001042631	chr19,chr19,chr19,chr19	-,-,-,+	ALKBH6,ALKBH6,C19orf46,SDHAF1	185,185,-5200,-18833
chr17:60561277-60561630	chr17	+	60561468	60561669	True	NR_027486,NM_001112707,NM_006852	chr17,chr17,chr17	-,+,+	TBC1D3P2,TLK2,TLK2	-208452,-5134,-5134
chr12:9988958-9990201	chr12	+	9989384	9990250	True	NM_005127,NM_016523	chr12,chr12	-,+	CLEC2B,KLRF1	32258,-9370
chr14:90864304-90864530	chr14	+	90864314	90864542	True	NM_006888,NM_001166106,NM_199043	chr14,chr14,chr14	+,+,-	CALM1,CALM1,C14orf102	-1038,63,-66035
chr22:38381551-38382005	chr22	+	38381605	38381979	True	NM_006941,NM_021974	chr22,chr22	-,+	SOX10,POLR2F	-1066,-31982
chr6:43137205-43137955	chr6	+	43137505	43137676	True	NM_006443,NM_003131	chr6,chr6	-,+	C6orf108,SRF	59592,1243
chr17:56268424-56268783	chr17	+	56268429	56268759	True	NM_000502,NM_017777	chr17,chr17	+,-	EPX,MKS1	1329,27957
chr6:133119793-133120170	chr6	+	133119853	133120202	True	NM_052831,NM_001016	chr6,chr6	-,+	C6orf192,RPS12	-106,15505
chrX:51487002-51487902	chrX	+	51487048	51487919	True	NR_033773,NM_018094	chrX,chrX	-,+	LOC441495,GSPT2	-61601,-618
chr3:50388671-50389064	chr3	+	50388701	50389007	True	NM_015896,NM_007022,NM_007024,NM_006545	chr3,chr3,chr3,chr3	-,+,-,-	ZMYND10,CYB561D2,TMEM115,NPRL2	-5545,-455,7982,-215
chr16:10519006-10519470	chr16	+	10519217	10519479	True	NM_024997,NM_001424	chr16,chr16	+,-	ATF7IP2,EMP2	3245,155114
chr10:104404632-104404940	chr10	+	104404874	104404958	True	NM_030912,NM_004311	chr10,chr10	+,-	TRIM8,ARL3	-673,69282
chr1:92097999-92099287	chr1	+	92098195	92099232	True	NM_001017975,NR_003130	chr1,chr1	-,+	HFM1,HSP90B3P	-227769,1335
chr8:41381567-41381988	chr8	+	41381601	41381791	True	NM_152568,NM_032336	chr8,chr8	-,+	NKX6-3,GINS4	123151,4933
chr8:48870229-48871657	chr8	+	48870364	48871677	True	NM_001081640,NM_182746,NM_006904,NM_005914	chr8,chr8,chr8,chr8	-,+,-,+	PRKDC,MCM4,PRKDC,MCM4	1120,1085,1120,1085
chr3:193269504-193270459	chr3	+	193269566	193270492	True	NM_032279,NM_015560	chr3,chr3	-,+	ATP13A4,OPA1	2254,40440
chr2:6080279-6080659	chr2	+	6080450	6080684	True	NM_207315,NR_026832	chr2,chr2	-,+	CMPK2,LOC150622	925302,-7682
chr3:112068649-112070045	chr3	+	112069014	112070046	True	NM_005944,NM_183061	chr3,chr3	+,-	CD200,SLC9A10	-17162,-55940
chr19:38798987-38799576	chr19	+	38799140	38799592	True	NM_001039673,NM_001145461,NM_001039671,NM_001039672,NM_001145462,NM_033520,NM_033557,NM_001145463	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,+,-,-	YIF1B,YIF1B,YIF1B,YIF1B,YIF1B,C19orf33,YIF1B,YIF1B	7064,6903,6903,7064,6903,-4387,967,7064
chr3:52570839-52571091	chr3	+	52570856	52571068	True	NM_001124767,NM_001134231,NM_022908	chr3,chr3,chr3	+,-,-	C3orf78,NT5DC2,NT5DC2	-286,-3063,-1763
chr20:25368893-25369601	chr20	+	25368893	25369391	True	NM_015600,NM_021067,NM_001042472	chr20,chr20,chr20	-,+,-	ABHD12,GINS1,ABHD12	2277,18931,2277
chr12:109272600-109273774	chr12	+	109273159	109273689	True	NM_001917,NM_001161330	chr12,chr12	+,-	DAO,SSH1	167,-21800
chr18:39535160-39536505	chr18	+	39535270	39536435	True	NM_002647,NR_002838	chr18,chr18	+,-	PIK3C3,KC6	-134,-434709
chr19:55313352-55315032	chr19	+	55313483	55314995	True	NM_001080770,NM_001080772,NM_001127255,NM_002255	chr19,chr19,chr19,chr19	+,+,-,+	KIR2DL4,KIR2DL4,NLRP7,KIR2DL4	71,71,143928,71
chr1:154833034-154833521	chr1	+	154833039	154833431	True	NM_001826,NM_001204087,NM_002249,NM_170782	chr1,chr1,chr1,chr1	+,-,-,-	CKS1B,KCNN3,KCNN3,KCNN3	113686,9373,9373,-701
chr16:89753477-89753681	chr16	+	89753476	89753688	True	NM_001098533,NM_001160367,NM_052987,NR_027702,NR_027703,NM_152339,NM_052988	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,-,+	CDK10,CDK10,CDK10,CDK10,CDK10,SPATA2L,CDK10	-451,-451,-451,-451,-451,14483,-451
chr6:97726201-97727079	chr6	+	97726403	97727083	True	NM_052904,NM_198468	chr6,chr6	+,-	KLHL32,MMS22L	-353958,4026
chr12:114841265-114841989	chr12	+	114841309	114841989	True	NM_181486,NM_080718,NM_080717,NM_138432,NM_000192	chr12,chr12,chr12,chr12,chr12	-,-,-,+,-	TBX5,TBX5,TBX5,SDSL,TBX5	1950,-86,4308,-981151,4308
chr2:232824487-232824864	chr2	+	232824641	232824865	True	NM_024409,NM_152383	chr2,chr2	-,+	NPPC,DIS3L2	-33682,1427
chr16:90093789-90094158	chr16	+	90093790	90094134	True	NM_001042610,NM_001214,NR_023348	chr16,chr16,chr16	-,-,+	DBNDD1,C16orf3,GAS8	-7853,2225,-4834
chr1:75116485-75117121	chr1	+	75116840	75117140	True	NM_001162916,NM_001002912	chr1,chr1	+,-	TYW3,C1orf173	81695,22332
chr6:10432789-10434039	chr6	+	10433092	10433906	True	NR_033910,NR_027793	chr6,chr6	+,-	LOC100130275,C6orf218	-20592,1199
chr20:43102997-43104173	chr20	+	43102997	43104203	True	NM_198941,NM_024331,NM_001039199	chr20,chr20,chr20	-,+,+	SERINC3,TTPAL,TTPAL	46573,343,343
chr22:29074505-29074791	chr22	+	29074542	29074661	True	NM_001145418,NM_172002	chr22,chr22	-,+	TTC28,HSCB	1255,63381
chr5:60241465-60241738	chr5	+	60241534	60241712	True	NM_000082,NM_174889	chr5,chr5	-,+	ERCC8,NDUFAF2	-629,-629
chr15:67416683-67417152	chr15	+	67416695	67417092	True	NM_001145102,NM_024666	chr15,chr15	+,-	SMAD3,AAGAB	961,130040
chr4:7938467-7939192	chr4	+	7938599	7939225	True	NM_001134647,NR_026892,NM_198595	chr4,chr4,chr4	-,+,-	AFAP1,AFAP1-AS1,AFAP1	2478,-182837,2478
chr11:63438654-63438876	chr11	+	63438735	63438923	True	NM_201428,NM_201429,NM_006054,NM_201430,NM_015459	chr11,chr11,chr11,chr11,chr11	+,+,+,+,-	RTN3,RTN3,RTN3,RTN3,ATL3	9998,9998,9998,9998,210
chr8:132919613-132920398	chr8	+	132919741	132920291	True	NM_015137,NM_001080399	chr8,chr8	+,-	EFR3A,OC90	-3443,151391
chr3:196757333-196758691	chr3	+	196757786	196758740	True	NR_024388,NM_005929,NM_033316	chr3,chr3,chr3	+,-,-	LOC152217,MFI2,MFI2	-88344,-1099,-1100
chr10:128995239-128996705	chr10	+	128995263	128996743	True	NM_001030013,NM_001039762	chr10,chr10	+,-	NPS,FAM196A	350869,-841
chrY:10020367-10021913	chrY	+	10020588	10021908	True	NR_003593,NR_003589	chrY,chrY	+,-	TTTY23B,TTTY1B	-272233,-408660
chr19:19725366-19726581	chr19	+	19726167	19726397	True	NM_025245,NM_033204	chr19,chr19	-,+	PBX4,ZNF101	3096,53265
chr5:173121365-173121739	chr5	+	173121370	173121438	True	NR_027109,NM_138369	chr5,chr5	+,-	LOC285593,BOD1	-114764,-77704
chr1:48410311-48410530	chr1	+	48410319	48410573	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	52039,277783
chr9:116060443-116060739	chr9	+	116060564	116060679	True	NM_145051,NM_004697	chr9,chr9	-,+	RNF183,PRPF4	692,-22642
chr1:3670193-3670709	chr1	+	3670204	3670748	True	NR_033709,NR_033708,NR_033710,NR_033711,NR_033712,NM_152492	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,+	KIAA0495,KIAA0495,KIAA0495,KIAA0495,KIAA0495,CCDC27	-6267,-6267,-6267,-6267,-6869,-1290
chr19:54414478-54415476	chr19	+	54414641	54415477	True	NM_144687,NM_031896	chr19,chr19	-,+	NLRP12,CACNG7	-86993,513
chr3:172167808-172168494	chr3	+	172167826	172168299	True	NM_018098,NM_004122,NM_198407	chr3,chr3,chr3	+,-,-	ECT2,GHSR,GHSR	303998,-1580,-1580
chr22:32147870-32148405	chr22	+	32147969	32148254	True	NM_001007188,NM_014662,NM_001136029,NM_173566	chr22,chr22,chr22,chr22	+,+,+,-	DEPDC5,DEPDC5,DEPDC5,PRR14L	1814,1814,2598,-1849
chr4:174088165-174089491	chr4	+	174088217	174089538	True	NM_017423,NM_001130689	chr4,chr4	+,-	GALNT7,HMGB2	365,165432
chrX:125296927-125298589	chrX	+	125297331	125298521	True	NM_001013628,NM_001122716	chrX,chrX	-,+	DCAF12L2,CXorf64	1609,655225
chr3:164786252-164786515	chr3	+	164786487	164786560	True	NM_001041,NM_001122752	chr3,chr3	-,+	SI,SERPINI1	9774,2666871
chr5:169063588-169064206	chr5	+	169063757	169064019	True	NM_003062,NM_004946	chr5,chr5	-,+	SLIT3,DOCK2	-335624,231
chr3:1135261-1137077	chr3	+	1135318	1136734	True	NM_000564,NM_014461	chr3,chr3	-,+	IL5RA,CNTN6	2015389,-740
chr1:161695896-161696461	chr1	+	161695908	161696278	True	NM_001002901,NR_002595	chr1,chr1	+,-	FCRLB,RPL31P11	-3502,-40866
chr19:38827899-38828517	chr19	+	38827992	38828292	True	NM_001145463,NM_021185	chr19,chr19	-,+	YIF1B,CATSPERG	-21386,-1600
chr10:70092042-70092421	chr10	+	70092134	70092438	True	NM_001033083,NM_021644,NM_012207,NM_022129	chr10,chr10,chr10,chr10	-,+,+,-	PBLD,HNRNPH3,HNRNPH3,PBLD	296,-417,-417,296
chr8:145202952-145203184	chr8	+	145203152	145203226	True	NM_030974,NM_032450,NM_001099281,NM_001099280	chr8,chr8,chr8,chr8	-,+,+,+	SHARPIN,HEATR7A,HEATR7A,HEATR7A	-44012,-284,-284,-284
chr8:145202952-145203184	chr8	+	145448360	145448434	False	NM_016458,NM_015201	chr8,chr8	+,-	FAM203A,BOP1	-10531,66736
chr12:6948206-6948850	chr12	+	6948315	6948815	True	NM_002075,NM_031299	chr12,chr12	+,-	GNB3,CDCA3	559,11691
chr6:43478162-43478399	chr6	+	43478243	43478375	True	NM_004875,NM_001012974,NM_203290,NM_015388	chr6,chr6,chr6,chr6	+,-,+,-	POLR1C,C6orf154,POLR1C,YIPF3	6415,99,6401,6403
chr4:169352247-169353710	chr4	+	169352305	169353672	True	NM_001012967,NM_001166108	chr4,chr4	-,+	DDX60L,PALLD	48016,64544
chr1:113711277-113711589	chr1	+	113711367	113711495	True	NM_003051,NM_014813	chr1,chr1	-,+	SLC16A1,LRIG2	-212392,-95597
chr6:44378899-44380610	chr6	+	44379113	44379931	True	NM_001253,NM_020745	chr6,chr6	+,-	CDC5L,AARS2	-23862,-98050
chr17:48049956-48050459	chr17	+	48050161	48050389	True	NM_001934,NM_005220,NM_138281	chr17,chr17,chr17	+,-,+	DLX4,DLX3,DLX4	-82,22249,-3650
chr9:140100358-140100635	chr9	+	140100429	140100668	True	NM_001144028,NM_001128228,NM_001144026,NM_001144027,NM_053045,NM_014434	chr9,chr9,chr9,chr9,chr9,chr9	+,-,+,+,-,+	NDOR1,TPRN,NDOR1,NDOR1,TMEM203,NDOR1	-361,-5266,-361,-361,-339,-361
chr4:70790834-70792623	chr4	+	70790903	70792642	True	NM_001891,NM_001890,NM_001025104	chr4,chr4,chr4	-,+,+	CSN2,CSN1S1,CSN1S1	34134,4156,4156
chrX:14569855-14571279	chrX	+	14569951	14571249	True	NM_001018113,NM_002063	chrX,chrX	-,+	FANCB,GLRA2	319987,-22583
chr9:34629261-34629918	chr9	+	34629307	34629681	True	NM_000155,NM_001017363,NM_147157,NM_024348,NM_007234,NM_005866	chr9,chr9,chr9,chr9,chr9,chr9	+,-,-,-,-,-	GALT,ARID3C,SIGMAR1,DCTN3,DCTN3,SIGMAR1	16953,-1296,8137,-8811,-8811,8137
chr1:149456877-149457157	chr1	+	149457142	149457208	True	NR_027484,NM_001024599	chr1,chr1	+,-	FCGR1C,HIST2H2BF	-87904,-57913
chr1:149456877-149457157	chr1	+	143903730	143903796	False	NM_207418,NR_034178	chr1,chr1	-,+	FAM72D,SRGAP2P2	9405,11951
chr11:119219850-119220618	chr11	+	119219981	119220134	True	NM_015645,NM_032015,NM_031433	chr11,chr11,chr11	-,+,-	C1QTNF5,RNF26,MFRP	-2598,-14797,-2598
chr10:17850627-17851016	chr10	+	17850632	17851054	True	NM_002438,NM_014241,NM_001009567	chr10,chr10,chr10	+,-,+	MRC1,PTPLA,MRC1L1	307,-191259,307
chr10:17850627-17851016	chr10	+	18097622	18098044	False	NM_002438,NM_014241,NM_001009567	chr10,chr10,chr10	+,-,+	MRC1,PTPLA,MRC1L1	307,-438249,307
chr11:116958518-116959313	chr11	+	116958531	116959320	True	NM_025164,NM_002572	chr11,chr11	-,+	SIK3,PAFAH1B2	9731,55679
chr16:2021669-2021875	chr16	+	2021673	2021871	True	NR_003142,NM_174903,NM_144603,NM_002952,NM_172167,NR_002327,NR_002326,NM_006453,NM_172168,NR_003020	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,-,-,-,-,-,+,-,+	SNHG9,RNF151,NOXO1,RPS2,NOXO1,SNORA10,SNORA64,TBL3,NOXO1,SNORA78	-6728,-4850,9619,-6846,9363,-9206,-8566,192,9363,-6540
chr10:64563075-64564227	chr10	+	64563096	64564068	True	NM_000399,NM_032804	chr10,chr10	-,+	EGR2,ADO	12108,447
chr18:59853830-59854088	chr18	+	59853896	59854132	True	NM_176787,NM_012327,NM_020854	chr18,chr18,chr18	-,-,+	PIGN,PIGN,KIAA1468	207,207,391
chr7:103086859-103087456	chr7	+	103086902	103087445	True	NM_206885,NM_206884,NM_206883,NM_002803,NM_198999,NM_001167962	chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,+,-,-	SLC26A5,SLC26A5,SLC26A5,PSMC2,SLC26A5,SLC26A5	-278,-278,-278,-98982,-278,-278
chr2:106362200-106362766	chr2	+	106362249	106362753	True	NM_003581,NM_001004722,NM_201557	chr2,chr2,chr2	+,+,-	NCK2,NCK2,FHL2	-780,-780,-307019
chr8:110652102-110652498	chr8	+	110652134	110652476	True	NM_001099750,NM_004215,NM_001099751,NM_001099747,NM_001099753,NM_001099752,NM_001099755,NM_001099754,NM_001099756,NM_017786,NM_001099748,NM_001099749	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,+,-,-,-,-,-,-,-,-,-,-	SYBU,EBAG9,SYBU,SYBU,SYBU,SYBU,SYBU,SYBU,SYBU,SYBU,SYBU,SYBU	8706,-99875,5396,8706,4625,5396,4625,4625,2993,8706,8706,8706
chr9:136858949-136859398	chr9	+	136859261	136859447	True	NM_003371,NR_015427,NM_001134398	chr9,chr9,chr9	-,+,-	VAV2,NCRNA00094,VAV2	-1815,31113,-1815
chr6:44097876-44098298	chr6	+	44097888	44098046	True	NM_018426,NM_032111	chr6,chr6	+,-	TMEM63B,MRPL14	-2563,-2697
chr16:70679676-70680106	chr16	+	70680086	70680148	True	NM_001172772,NM_138383	chr16,chr16	+,-	IL34,MTSS1L	-22242,39856
chr9:104497689-104499280	chr9	+	104497758	104499274	True	NM_019592,NM_133445	chr9,chr9	+,-	RNF20,GRIN3A	-201677,1638
chr5:141019489-141019779	chr5	+	141019489	141019747	True	NM_001130029,NM_173828,NM_003883	chr5,chr5,chr5	+,+,-	RELL2,RELL2,HDAC3	-3023,-3023,-3066
chr8:103541871-103543428	chr8	+	103542477	103543322	True	NM_024410,NM_015902	chr8,chr8	+,-	ODF1,UBR5	20525,-117560
chr2:74678835-74679225	chr2	+	74679148	74679241	True	NM_001015055,NM_031288,NM_012477,NR_037849	chr2,chr2,chr2,chr2	-,+,+,+	RTKN,INO80B,WBP1,INO80B-WBP1	-10088,2908,6285,2908
chr19:34973622-34974222	chr19	+	34973791	34974270	True	NR_027620,NM_001080436	chr19,chr19	-,+	LOC643719,WTIP	94376,-962
chr9:34178618-34178910	chr9	+	34178620	34178941	True	NR_033243,NM_016525,NM_015397,NM_001171204,NM_001171202,NM_001171203,NM_001171201	chr9,chr9,chr9,chr9,chr9,chr9,chr9	+,+,-,+,+,+,+	UBAP1,UBAP1,DCAF12,UBAP1,UBAP1,UBAP1,UBAP1	61,61,-51849,61,61,61,61
chr19:37825742-37827495	chr19	+	37825805	37827204	True	NM_181786,NR_029390	chr19,chr19	+,-	HKR1,LOC284412	-276,-65893
chr6:53656404-53658403	chr6	+	53656469	53658303	True	NM_018214,NM_001003760	chr6,chr6	+,-	LRRC1,KLHL31	1474,-125963
chr14:51135176-51135783	chr14	+	51135281	51135804	True	NM_021818,NM_181598	chr14,chr14	-,+	SAV1,ATL1	-258,-108589
chr17:43502610-43502962	chr17_ctg5_hap1	+	117761	117931	False	NM_001113738,NM_174919,NM_199282	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	+,-,-	ARL17A,ARHGAP27,ARHGAP27	77789,7526,255
chr17:43502610-43502962	chr17	+	43502637	43502807	True	NR_024435,NM_174919,NM_199282	chr17,chr17,chr17	+,-,-	LOC100133991,ARHGAP27,ARHGAP27	-163130,7525,255
chr2:131676080-131677371	chr2	+	131676287	131676987	True	NM_032995,NM_015320,NM_001009993	chr2,chr2,chr2	+,+,-	ARHGEF4,ARHGEF4,FAM168B	-2114,-2114,174067
chr8:145060797-145061018	chr8	+	145060945	145061009	True	NM_000837,NM_032789,NM_001009184	chr8,chr8,chr8	+,-,+	GRINA,PARP10,GRINA	3216,-310,3216
chr12:104697981-104699812	chr12	+	104698079	104699640	True	NM_006166,NM_001008394	chr12,chr12	-,+	NFYB,EID3	-166039,-581
chr8:127793216-127794660	chr8	+	127793773	127794662	True	NM_001159542,NM_174911	chr8,chr8	+,-	POU5F1B,FAM84B	633194,-223062
chr12:78264824-78265814	chr12	+	78264826	78265599	True	NM_203394,NM_014903	chr12,chr12	-,+	E2F7,NAV3	-805466,-39808
chr18:77153408-77153811	chr18	+	77153419	77153784	True	NM_006162,NM_172388,NM_172389,NM_172387,NM_001146343,NM_172390	chr18,chr18,chr18,chr18,chr18,chr18	+,+,+,+,-,+	NFATC1,NFATC1,NFATC1,NFATC1,PQLC1,NFATC1	1987,1987,6541,6541,557919,1987
chr15:81271689-81272593	chr15	+	81271706	81272632	True	NM_022566,NM_015154	chr15,chr15	+,-	MESDC1,MESDC2	20662,9623
chr4:111544522-111546240	chr4	+	111544605	111546267	True	NM_001977,NM_000325	chr4,chr4	+,-	ENPEP,PITX2	-147428,-351
chr1:62210498-62211036	chr1	+	62210501	62210794	True	NM_176877,NM_032027	chr1,chr1	+,-	INADL,TM2D1	-2403,-19406
chr18:29518965-29520159	chr18	+	29519319	29519941	True	NM_014939,NM_017831	chr18,chr18	-,+	TRAPPC8,RNF125	3200,78503
chr9:19301030-19302770	chr9	+	19301222	19302621	True	NM_001010,NM_017925	chr9,chr9	-,+	RPS6,DENND4C	77664,-10532
chr5:99724817-99725141	chr5	+	99724846	99725062	True	NM_198507,NR_027503	chr5,chr5	+,-	FAM174A,LOC100133050	146061,-888
chr5:99724817-99725141	chr5	-	98860787	98860897	False	NM_001270,NR_036530	chr5,chr5	-,+	CHD1,LOC100289230	-598549,-596000
chr4:52734690-52735212	chr4	+	52734755	52735010	True	NM_001024611,NM_015115	chr4,chr4	-,+	LRRC66,DCUN1D4	148833,-25537
chr1:155897565-155898019	chr1	+	155897675	155897755	True	NM_014949,NR_002974,NM_181885,NR_003005	chr1,chr1,chr1,chr1	-,-,+,-	KIAA0907,SNORA42,RXFP4,SCARNA4	6491,-7842,13724,-1798
chr13:49605440-49606726	chr13	+	49605638	49606626	True	NM_030925,NM_001079673	chr13,chr13	-,+	CAB39L,FNDC3A	369159,-55645
chr12:122665944-122667094	chr12	+	122666102	122666663	True	NM_001014336,NM_001098519	chr12,chr12	-,+	IL31,LRRC43	-7356,1003
chr17:77706326-77707246	chr17	+	77706484	77707106	True	NM_178543,NM_020649	chr17,chr17	+,-	ENPP7,CBX8	-1653,63863
chr5:70881185-70881988	chr5	+	70881215	70881864	True	NM_022132,NR_033968	chr5,chr5	+,-	MCCC2,LOC100049076	1250,-326093
chr19:55478772-55479172	chr19	+	55478888	55479196	True	NM_001174083,NM_001174082,NM_017852,NM_001174081,NM_206828	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	NLRP2,NLRP2,NLRP2,NLRP2,NLRP7	-1235,-1235,-1235,-2294,-20015
chr22:30662804-30663290	chr22	+	30663015	30663079	True	NM_020530,NM_001017437	chr22,chr22	-,+	OSM,CCDC157	-186,89547
chr2:160454595-160455165	chr2	+	160454827	160455044	True	NM_013450,NM_022826	chr2,chr2	-,+	BAZ2B,MARCH7	18074,113965
chr19:42384974-42386002	chr19	+	42384999	42385675	True	NM_198977,NM_001783,NM_021601,NM_004706,NM_199002,NM_173506	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,-	ARHGEF1,CD79A,CD79A,ARHGEF1,ARHGEF1,LYPD4	1591,-3860,-3860,1591,2770,-36491
chr21:39493915-39495823	chr21	+	39494176	39495761	True	NR_026842,NR_026839,NR_026840,NR_026841,NR_026838,NM_005867	chr21,chr21,chr21,chr21,chr21,chr21	+,+,+,+,+,-	DSCR8,DSCR8,DSCR8,DSCR8,DSCR8,DSCR4	-682,-682,-682,-682,-682,-722
chr12:85422621-85423179	chr12	+	85422666	85423026	True	NM_001079910,NM_032165,NM_001100917	chr12,chr12,chr12	+,+,-	LRRIQ1,LRRIQ1,TSPAN19	7072,7072,7087
chr10:43939115-43939391	chr10	+	43939237	43939304	True	NR_026693,NM_001098204	chr10,chr10	+,-	ZNF487P,HNRNPF	-6714,-34541
chr17:42347391-42347812	chr17	+	42347526	42347644	True	NM_001144826,NM_000342	chr17,chr17	+,-	RUNDC3A,SLC4A1	38282,-2024
chr19:9471114-9472683	chr19	+	9471415	9472584	True	NM_198535,NM_003451	chr19,chr19	-,+	ZNF699,ZNF177	-55620,1111
chr11:7693733-7694482	chr11	+	7693759	7694453	True	NM_003621,NM_016229	chr11,chr11	+,-	PPFIBP2,CYB5R2	-158809,418
chr22:24820807-24821084	chr22	+	24820915	24821013	True	NR_028484,NM_000675	chr22,chr22	-,+	C22orf45,ADORA2A	69820,2516
chr16:72030976-72031205	chr16	+	72030983	72031184	True	NM_001361,NM_181536	chr16,chr16	+,-	DHODH,PKD1L3	11458,2752
chr14:31032239-31033017	chr14	+	31032454	31032747	True	NM_017769,NR_030354	chr14,chr14	+,-	G2E3,MIR624	-4182,451252
chr3:183272806-183273756	chr3	+	183273063	183273793	True	NM_130446,NM_017644	chr3,chr3	-,+	KLHL6,KLHL24	-42,79617
chr10:56517334-56518612	chr10	+	56517389	56518631	True	NM_001190478,NM_001142771	chr10,chr10	+,-	MTRNR2L5,PCDH15	840118,42477
chr1:3567909-3568169	chr1	+	3567910	3568218	True	NM_001204188,NM_001204184,NM_005427,NM_001204186,NM_001204187,NM_001204185,NM_017818	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,+,-	TP73,TP73,TP73,TP73,TP73,TP73,WDR8	910,910,910,910,910,910,-1239
chr20:49411185-49411455	chr20	+	49411225	49411381	True	NM_198799,NM_015339,NM_017843,NM_001010974	chr20,chr20,chr20,chr20	+,-,+,+	BCAS4,ADNP,BCAS4,BCAS4	85,136196,85,85
chr14:29234814-29235127	chr14	+	29234816	29235066	True	NM_002742,NR_026731,NR_026732,NM_005249	chr14,chr14,chr14,chr14	-,+,+,+	PRKD1,C14orf23,C14orf23,FOXG1	1161893,6843,6843,1220
chr2:198571925-198572513	chr2	+	198571997	198572533	True	NM_144629,NM_138395	chr2,chr2	-,+	RFTN2,MARS2	-31413,-2027
chr13:51623576-51624324	chr13	+	51623636	51624323	True	NR_003923,NM_001142279	chr13,chr13	-,+	GUCY1B2,RNASEH2B	16020,-139873
chr9:21405637-21406244	chr9	+	21405654	21406237	True	NM_000605,NM_002170	chr9,chr9	-,+	IFNA2,IFNA8	-20258,2908
chr15:25311446-25312452	chr15	+	25311492	25312378	True	NR_003317,NR_003322,NR_003320,NR_003321,NR_003326,NR_003327,NR_003324,NR_003323,NR_003325,NR_003319,NR_003318,NM_130838	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,+,+,-	SNORD116-2,SNORD116-7,SNORD116-5,SNORD116-6,SNORD116-11,SNORD116-12,SNORD116-9,SNORD116-8,SNORD116-10,SNORD116-4,SNORD116-3,UBE3A	-1371,555,555,-1371,8696,9818,5874,3199,6881,-6859,5874,338325
chr1:4713653-4713906	chr1	+	4713652	4713946	True	NM_018836,NM_001042478,NM_207356	chr1,chr1,chr1	+,+,-	AJAP1,AJAP1,C1orf174	1158,1158,-896795
chr19:6775679-6776927	chr19	+	6775772	6776695	True	NM_005490,NM_005428	chr19,chr19	-,+	SH2D3A,VAV1	-8249,-3101
chr6:42897899-42899266	chr6	+	42898008	42898970	True	NM_006586,NM_001008739	chr6,chr6	+,-	CNPY3,C6orf226	-1199,-39454
chr6:37785781-37786523	chr6	+	37785921	37786443	True	NM_153487,NM_021943	chr6,chr6	-,+	MDGA1,ZFAND3	-120155,863
chr12:111395019-111396168	chr12	+	111395177	111396173	True	NM_000432,NR_036513	chr12,chr12	-,+	MYL2,LOC100131138	-36773,-20822
chr9:130218290-130218863	chr9	+	130218289	130218854	True	NM_001005374,NM_001190723,NM_001005373,NM_138361,NR_002449,NM_000976	chr9,chr9,chr9,chr9,chr9,chr9	+,+,+,+,-,-	LRSAM1,LRSAM1,LRSAM1,LRSAM1,SNORA65,RPL12	-3806,-4575,-4575,-4551,-7373,-4578
chrY:21238298-21238565	chrY	+	21238412	21238476	True	NR_002159,NR_001543	chrY,chrY	+,-	TTTY9B,TTTY14	-346702,876
chr15:70947860-70949669	chr15	+	70947896	70949671	True	NM_001199017,NM_001008224	chr15,chr15	+,-	LRRC49,UACA	235256,45006
chr20:45980921-45981477	chr20	+	45981021	45981353	True	NM_183048,NR_024594,NM_012408,NM_183047	chr20,chr20,chr20,chr20	-,+,-,-	ZMYND8,LOC100131496,ZMYND8,ZMYND8	4171,-33826,4171,4171
chr3:154819603-154820690	chr3	+	154819614	154820738	True	NM_007289,NR_037902	chr3,chr3	+,-	MME,LOC100507537	-21586,190801
chr22:39473045-39473356	chr22	+	39473268	39473386	True	NM_021822,NM_175709	chr22,chr22	+,-	APOBEC3G,CBX7	-309,75202
chr22:39473045-39473356	chr22	+	39436907	39436985	False	NM_145298,NM_001006666,NM_175709	chr22,chr22,chr22	+,+,-	APOBEC3F,APOBEC3F,CBX7	-285,-285,111603
chr5:126478454-126479301	chr5	+	126478595	126479227	True	NM_032446,NM_001164478	chr5,chr5	+,-	MEGF10,FLJ44606	147228,-69411
chr8:118527005-118528210	chr8	+	118527062	118528171	True	NM_080651,NM_000127	chr8,chr8	+,-	MED30,EXT1	4793,595937
chr5:170209727-170210438	chr5	+	170209730	170210434	True	NM_014211,NM_004137	chr5,chr5	+,-	GABRP,KCNMB1	288,-393092
chr11:34646221-34647318	chr11	+	34646225	34647234	True	NM_001422,NM_012153	chr11,chr11	-,+	ELF5,EHF	-110895,-3695
chr3:38563882-38564086	chr3	+	38563881	38563965	True	NR_028389,NM_005107	chr3,chr3	-,+	LOC100128640,EXOG	-67570,-26169
chr19:39760470-39761271	chr19	+	39760817	39761307	True	NM_172139,NM_172138	chr19,chr19	-,+	IL28B,IL28A	-25206,-1711
chr2:158709397-158710954	chr2	+	158709403	158710846	True	NM_001105,NM_001135098	chr2,chr2	-,+	ACVR1,UPP2	20839,140844
chr22:29604828-29605053	chr22	+	29604828	29604888	True	NM_012265,NM_133455	chr22,chr22	-,+	RHBDD3,EMID1	59076,-2926
chr20:46611781-46612011	chr20	+	46611860	46611982	True	NR_026958,NM_198596	chr20,chr20	+,-	LOC284749,SULF2	376671,-196500
chr5:128795703-128795912	chr5	+	128795743	128795839	True	NM_133638,NM_001999	chr5,chr5	+,-	ADAMTS19,FBN2	263,-922008
chr9:99384796-99385145	chr9	+	99384847	99385119	True	NR_026792,NM_003671,NM_033331	chr9,chr9,chr9	+,-,-	LOC441455,CDC14B,CDC14B	102983,-2735,-2735
chr15:37179761-37180405	chr15	+	37179795	37180284	True	NR_024264,NM_032499	chr15,chr15	-,+	LOC145845,C15orf41	-1061,-247040
chr13:46037878-46038287	chr13	+	46037898	46038096	True	NM_001204476,NM_001010875,NM_031431	chr13,chr13,chr13	+,-,+	COG3,SLC25A30,COG3	933,-45382,933
chr3:157193148-157193374	chr3	+	157193204	157193333	True	NM_002852,NM_001167917	chr3,chr3	+,-	PTX3,VEPH1	-38689,20017
chr2:98328744-98329335	chr2	+	98328924	98329326	True	NM_001079,NM_005735	chr2,chr2	+,-	ZAP70,ACTR1B	704,-48363
chr11:55585659-55586980	chr11	+	55585682	55587025	True	NM_001001952,NM_001004738,NM_001004739,NM_001001960	chr11,chr11,chr11,chr11	+,+,+,-	OR5D18,OR5L1,OR5L2,OR5W2	80,-6800,7669,95090
chr5:18709868-18710603	chr5	+	18710074	18710650	True	NM_001167667,NM_006317	chr5,chr5	-,+	CDH18,BASP1	1277756,-1492390
chr2:132515029-132516054	chr2	+	132515313	132516019	True	NM_214461,NM_013310	chr2,chr2	-,+	C2orf27B,C2orf27A	43265,-35300
chr2:145093816-145094442	chr2	+	145094130	145094426	True	NR_033870,NM_001164629	chr2,chr2	+,-	DKFZp686O1327,GTDC1	331107,-4047
chr11:790175-790696	chr11	+	790260	790550	True	NM_001004,NM_001191060,NM_024698,NM_001191061,NM_016564	chr11,chr11,chr11,chr11,chr11	+,-,-,-,-	RPLP2,SLC25A22,SLC25A22,SLC25A22,CEND1	19385,7502,5770,7776,-134
chr1:42846842-42847379	chr1	+	42846861	42847370	True	NM_001198850,NM_173642	chr1,chr1	-,+	FOXJ3,RIMKLA	-45313,-444
chr4:128806017-128806556	chr4	+	128806102	128806363	True	NM_001190801,NM_001190799,NM_152778,NM_014264	chr4,chr4,chr4,chr4	+,+,-,+	PLK4,PLK4,MFSD8,PLK4	-3758,-4141,80830,-4141
chr9:94902324-94902674	chr9	+	94902349	94902667	True	NR_015444,NM_178324,NR_027341	chr9,chr9,chr9	+,-,+	LOC100128076,SPTLC1,C9orf44	-7284,-24659,1081
chr16:69455278-69456994	chr16	+	69455462	69457021	True	NM_030579,NM_005652	chr16,chr16	+,-	CYB5B,TERF2	1476,-35588
chr15:65824892-65826109	chr15	+	65825147	65826065	True	NM_197961,NM_016395	chr15,chr15	-,+	DPP8,PTPLAD1	-15112,-2379
chr7:100845783-100847075	chr7	+	100846329	100847015	True	NM_178176,NM_006349	chr7,chr7	-,+	MOGAT3,ZNHIT1	-2027,13969
chr16:525836-526440	chr16	+	526161	526433	True	NR_024121,NM_001142272	chr16,chr16	-,+	NCRNA00235,RAB11FIP3	51024,-1362
chr3:12597303-12597772	chr3	+	12597307	12597703	True	NM_001195279,NM_014160	chr3,chr3	-,+	LOC100129480,MKRN2	-10344,890
chr9:112970514-112971458	chr9	+	112970533	112971330	True	NM_001136562,NM_001012993	chr9,chr9	+,-	AKAP2,C9orf152	-82803,-120
chr19:10765942-10766258	chr19	+	10766007	10766245	True	NM_017620,NM_012218,NM_153464,NM_001137673,NR_024333,NM_004516	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,-,+	ILF3,ILF3,ILF3,ILF3,LOC147727,ILF3	-1128,-1128,-1128,-1128,-1459,-1128
chr4:104105311-104106181	chr4	+	104105362	104106128	True	NM_001813,NM_001008388	chr4,chr4	-,+	CENPE,CISD2	13498,-315278
chr12:16035617-16035895	chr12	+	16035703	16035911	True	NM_004447,NM_007178	chr12,chr12	-,+	EPS8,STRAP	-93193,-466
chr7:45930537-45932439	chr7	+	45930563	45932377	True	NM_000596,NM_000598	chr7,chr7	+,-	IGFBP1,IGFBP3	-2664,28544
chr3:37192353-37193179	chr3	+	37192391	37192943	True	NM_001172713,NM_001134369	chr3,chr3	+,-	GOLGA4,LRRFIP2	91738,24972
chr11:118929267-118929864	chr11	+	118929267	118929332	True	NM_021729,NM_006389,NM_001130991	chr11,chr11,chr11	+,-,-	VPS11,HYOU1,HYOU1	9160,-1351,-1342
chr8:33340684-33341700	chr8	+	33340684	33341530	True	NM_032664,NM_032509	chr8,chr8	-,+	FUT10,MAK16	-10020,1154
chr6:143772018-143772329	chr6	+	143772022	143772376	True	NM_182503,NM_003630	chr6,chr6	-,+	ADAT2,PEX3	-181,-155
chr11:45116592-45117403	chr11	+	45116666	45117420	True	NM_006034,NM_020229	chr11,chr11	-,+	TP53I11,PRDM11	-144058,-1153
chr17:79789595-79790008	chr17	+	79789688	79790020	True	NM_207368,NM_000160,NM_001093767,NM_001007533	chr17,chr17,chr17,chr17	-,+,-,-	FAM195B,GCGR,FAM195B,DYSFIP1	1197,-27729,1197,2956
chr15:34876354-34876675	chr15	+	34876561	34876625	True	NM_175741,NR_027410	chr15,chr15	+,-	C15orf55,GOLGA8B	-238546,-790
chr16:4589540-4590589	chr16	+	4589795	4590451	True	NM_001199055,NM_001199054,NM_013399,NM_001199056,NM_001145011	chr16,chr16,chr16,chr16,chr16	-,-,-,-,+	C16orf5,C16orf5,C16orf5,C16orf5,LOC342346	-979,-1324,-979,-979,16039
chr19:43969837-43970079	chr19	+	43970025	43970115	True	NM_001130011,NM_014400	chr19,chr19	+,-	TEX101,LYPD3	-51041,-194
chr22:21355611-21355822	chr22	+	21355643	21355871	True	NM_030573,NM_001008695,NR_027052,NR_027051	chr22,chr22,chr22,chr22	-,-,+,+	THAP7,THAP7,FLJ39582,FLJ39582	583,583,339,339
chr20:62291703-62292125	chr20	+	62291800	62292120	True	NR_037882,NM_016434,NM_015894,NM_032957	chr20,chr20,chr20,chr20	+,+,-,+	RTEL1-TNFRSF6B,RTEL1,STMN3,RTEL1	-2688,-2688,-7020,-2688
chrX:70837162-70837754	chrX	+	70837202	70837546	True	NM_001142797,NM_052957,NM_001504	chrX,chrX,chrX	-,+,-	CXCR3,ACRC,CXCR3	871,-39379,871
chr11:61526556-61526858	chr11	+	61526560	61526858	True	NR_026882,NM_013279,NM_001127392	chr11,chr11,chr11	-,+,+	DKFZP434K028,C11orf9,C11orf9	-1424,-3750,-6490
chr19:2049511-2049978	chr19	+	2049543	2050027	True	NM_001031735,NM_017572,NM_199054	chr19,chr19,chr19	+,-,-	IZUMO4,MKNK2,MKNK2	46840,1266,1266
chr3:158388645-158389936	chr3	+	158388912	158389970	True	NM_024996,NM_020169	chr3,chr3	+,-	GFM1,LXN	-26655,562
chr12:1740398-1740634	chr12	+	1740405	1740667	True	NM_032642,NR_037422	chr12,chr12	+,-	WNT5B,MIR3649	-2044,28929
chr20:62664858-62665153	chr20	+	62664868	62665205	True	NR_027687,NR_027686,NM_018419	chr20,chr20,chr20	+,+,-	NCRNA00176,NCRNA00176,SOX18	491,491,15827
chr11:116659135-116659520	chr11	+	116659181	116659463	True	NM_003904,NM_000040,NM_001166598,NM_052968	chr11,chr11,chr11,chr11	-,+,-,-	ZNF259,APOC3,APOA5,APOA5	-442,41160,3723,3723
chr12:93569058-93570954	chr12	+	93569286	93570889	True	NM_019094,NM_003566	chr12,chr12	+,-	NUDT4,EEA1	200811,-246179
chr1:166571081-166571697	chr1	+	166571099	166571673	True	NM_053053,NR_002925	chr1,chr1	-,+	TADA1,FMO9P	274031,1479
chr6:112409015-112409801	chr6	+	112409024	112409807	True	NM_016262,NM_001033564	chr6,chr6	-,+	TUBE1,C6orf225	-273,-401
chr18:48403789-48404829	chr18	+	48404318	48404857	True	NM_001168335,NM_002396,NM_001127174	chr18,chr18,chr18	+,+,-	ME2,ME2,MRO	574,574,-52564
chr13:20764893-20765816	chr13	+	20764997	20765771	True	NM_004004,NM_001190965	chr13,chr13	-,+	GJB2,ZMYM2	1393,-232074
chr18:21020961-21021709	chr18	+	21021049	21021540	True	NM_003831,NM_032933	chr18,chr18	+,-	RIOK3,C18orf45	11246,-3124
chrX:19987153-19988934	chrX	+	19987477	19988954	True	NM_001173456,NM_198279	chrX,chrX	+,-	PDHA1,CXorf23	-625523,19
chrX:47475025-47475905	chrX	+	47475342	47475944	True	NM_006950,NM_133499,NM_003254	chrX,chrX,chrX	-,-,+	SYN1,SYN1,TIMP1	3362,3362,-33710
chr6:20216830-20217222	chr6	+	20216927	20217203	True	NM_001949,NM_001080480	chr6,chr6	+,-	E2F3,MBOAT1	184933,-4257
chr14:50154277-50154508	chr14	+	50154281	50154433	True	NM_172193,NM_001197330,NM_001197331,NM_002692	chr14,chr14,chr14,chr14	+,-,-,-	KLHDC1,POLE2,POLE2,POLE2	5389,715,715,715
chr3:52719341-52719564	chr3	+	52719350	52719604	True	NR_003047,NM_018313,NM_018165,NR_003687,NM_181042,NM_014366,NR_003057,NM_206825,NM_206826	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,-,-,+,-,+,+,+,+	SNORD19,PBRM1,PBRM1,SNORD19B,PBRM1,GNL3,SNORD69,GNL3,GNL3	3651,312,-5611,5149,-5611,331,7147,331,331
chr1:24649194-24649461	chr1	+	24649220	24649486	True	NM_198173,NM_021180,NM_001195010,NM_001199013,NM_198174	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	GRHL3,GRHL3,GRHL3,C1orf201,GRHL3	-3462,43,-3218,90826,-3462
chr17:37309436-37309995	chr17	+	37309465	37309985	True	NM_020405,NM_000981	chr17,chr17	-,+	PLXDC1,RPL19	-1563,46550
chr17:8649212-8649427	chr17	+	8649211	8649337	True	NM_001158261,NM_004822,NM_144681	chr17,chr17,chr17	-,+,-	CCDC42,NTN1,CCDC42	-1057,275521,-1057
chr12:111806383-111806636	chr12	+	111806390	111806592	True	NM_001177996,NM_001177997,NM_005475,NM_144671	chr12,chr12,chr12,chr12	-,-,+,-	FAM109A,FAM109A,SH2B3,FAM109A	383,383,37159,383
chr11:118993278-118994513	chr11	+	118993408	118994175	True	NM_015517,NM_198971,NM_001382	chr11,chr11,chr11	+,+,-	HINFP,HINFP,DPAGT1	-1171,-1171,-20623
chr22:38607525-38607804	chr22	+	38607538	38607794	True	NM_001161573,NM_001161572,NM_001161574,NM_012323,NM_001199562	chr22,chr22,chr22,chr22,chr22	+,+,+,+,-	MAFF,MAFF,MAFF,MAFF,PLA2G6	-8562,-9650,-9650,-9650,-29702
chrX:153687334-153687550	chrX	+	153687361	153687451	True	NM_017514,NM_006014	chrX,chrX	+,-	PLXNA3,LAGE3	-789,20195
chr11:123754213-123755033	chr11	+	123754349	123755011	True	NM_001005197,NM_001013743	chr11,chr11	+,-	OR8D4,TMEM225	22127,1380
chr15:71176084-71176781	chr15	+	71176312	71176609	True	NM_001199018,NM_020147,NM_001199017,NM_017691	chr15,chr15,chr15,chr15	+,-,+,+	LRRC49,THAP10,LRRC49,LRRC49	8409,8220,8318,8318
chr10:135186128-135186440	chr10	+	135186127	135186401	True	NM_207127,NM_152911,NM_004092,NR_037509,NM_207128	chr10,chr10,chr10,chr10,chr10	+,+,-,-,+	PAOX,PAOX,ECHS1,MIR3944,PAOX	6339,6339,557,-960,6339
chr1:226678129-226679553	chr1	+	226678175	226679538	True	NM_001618,NM_001003665	chr1,chr1	-,+	PARP1,C1orf95	-82374,56962
chr17:62217809-62219508	chr17	+	62217898	62219552	True	NR_004380,NM_001433,NR_002995	chr17,chr17,chr17	+,-,+	SNORD104,ERN1,SNORA76	3885,-10396,4146
chr21:42520900-42521202	chr21	+	42520922	42521188	True	NR_024100,NR_036167	chr21,chr21	-,+	C21orf130,MIR3197	-931,18295
chr7:128210479-128210718	chr7	+	128210547	128210763	True	NM_183243,NR_024368	chr7,chr7	-,+	IMPDH1,FLJ45340	-160511,70531
chr2:3382454-3382654	chr2	+	3382509	3382625	True	NM_016030,NM_003310	chr2,chr2	+,-	TTC15,TSSC1	820,-856
chr1:27975933-27977841	chr1	+	27976099	27977813	True	NM_001143912,NM_005248	chr1,chr1	+,-	FAM76A,FGR	74676,-14372
chr4:49620240-49620536	chr4	+	49620293	49620367	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-632079,-711478
chr19:55144286-55144501	chr19	+	55144359	55144491	True	NM_001081639,NM_001081638,NM_001081637,NM_145057	chr19,chr19,chr19,chr19	+,+,+,-	LILRB1,LILRB1,LILRB1,CDC42EP5	-2502,-2502,-2442,-159937
chr3:52828704-52829055	chr3	+	52828742	52829094	True	NM_003157,NM_002217	chr3,chr3	-,+	NEK4,ITIH3	-23777,-9
chr10:45404726-45404939	chr10	+	45404774	45404958	True	NR_033842,NM_001123376	chr10,chr10	-,+	LOC220980,TMEM72	50229,1805
chr1:94702488-94702709	chr1	+	94702487	94702709	True	NM_004815,NM_001122674	chr1,chr1	-,+	ARHGAP29,ABCD3	648,181223
chrX:136649846-136650108	chrX	+	136649857	136650151	True	NM_054021,NM_003413	chrX,chrX	-,+	GPR101,ZIC3	-536024,-1562
chr6:43656416-43657160	chr6	+	43656747	43657168	True	NM_152732,NM_018135,NM_001193343	chr6,chr6,chr6	+,-,-	RSPH9,MRPS18A,MRPS18A	-44043,-1198,-1198
chr11:18136503-18137248	chr11	+	18136692	18137044	True	NR_026576,NM_138421,NM_054031	chr11,chr11,chr11	-,-,+	SAA3P,SAAL1,MRGPRX3	693,-9054,5457
chr12:110907473-110907994	chr12	+	110907596	110907878	True	NM_013300,NM_016301,NM_001164372,NM_001164373	chr12,chr12,chr12,chr12	+,-,-,-	C12orf24,GPN3,GPN3,GPN3	-1415,-1507,-1070,-1507
chr17:48784840-48785063	chr17	+	48784955	48785027	True	NM_052855,NM_006107	chr17,chr17	-,+	ANKRD40,LUC7L3	293,11898
chr11:27498539-27500286	chr11	+	27498574	27500243	True	NM_018490,NR_002832	chr11,chr11	-,+	LGR4,BDNF-AS1	-4240,28155
chr11:77187069-77188721	chr11	+	77187291	77188314	True	NM_001128620,NM_002576,NM_173039	chr11,chr11,chr11	-,-,+	PAK1,PAK1,AQP11	-2183,-2183,112365
chr15:66587086-66588952	chr15	+	66587090	66588816	True	NM_133375,NM_001143688,NM_032445	chr15,chr15,chr15	+,+,-	DIS3L,DIS3L,MEGF11	-1508,-1221,-41015
chr9:38066954-38067233	chr9	+	38066955	38067129	True	NM_003028,NM_024345	chr9,chr9	-,+	SHB,DCAF10	2131,-266216
chr7:152374182-152374516	chr7	+	152374186	152374394	True	NM_005431,NM_001040135	chr7,chr7	-,+	XRCC2,ACTR3B	-936,82456
chr19:36158554-36159537	chr19	+	36159032	36159488	True	NM_024660,NM_007000	chr19,chr19	-,+	IGFLR1,UPK1A	73913,-1368
chr19:54664969-54665175	chr19	+	54664983	54665061	True	NM_014516,NM_024316	chr19,chr19	+,-	CNOT3,LENG1	-23598,-1537
chr19:58980856-58982008	chr19	+	58980972	58981947	True	NM_017908,NM_003433,NM_014347	chr19,chr19,chr19	+,-,+	ZNF446,ZNF132,ZNF324	5847,-29383,-2611
chr9:138414583-138414891	chr9	+	138414701	138414891	True	NM_144654,NM_002297	chr9,chr9	-,+	C9orf116,LCN1	-22940,-1466
chr6:35437099-35437312	chr6	+	35437285	35437347	True	NM_003214,NM_007104	chr6,chr6	-,+	TEAD3,RPL10A	27564,-1158
chr12:49177908-49178546	chr12	+	49178141	49178419	True	NM_000725,NM_020983,NM_015270	chr12,chr12,chr12	+,-,-	CACNB3,ADCY6,ADCY6	34092,4451,-264
chrX:53196610-53197515	chrX	+	53196701	53197081	True	NM_022117,NM_001146702	chrX,chrX	+,-	TSPYL2,KDM5C	-85221,57573
chr15:43559058-43559751	chr15	+	43559182	43559792	True	NM_201631,NM_001012969,NM_004245	chr15,chr15,chr15	-,+,-	TGM5,ADAL,TGM5	-127,63079,-127
chr1:161375414-161375870	chr1	+	161375515	161375875	True	NM_001013625,NM_003001	chr1,chr1	-,+	C1orf192,SDHC	-37851,-91400
chr3:133615401-133616662	chr3	+	133615431	133616701	True	NM_021203,NM_016577	chr3,chr3	+,-	SRPRB,RAB6B	-112605,-740
chr10:92673073-92673750	chr10	+	92673081	92673741	True	NM_001104546,NM_014391	chr10,chr10	+,-	RPP30,ANKRD1	-41423,7342
chr12:29935450-29936014	chr12	+	29935463	29935995	True	NM_018099,NM_001193451,NM_175861	chr12,chr12,chr12	+,-,-	FAR2,TMTC1,TMTC1	-558924,798,1747
chr9:37587603-37589344	chr9	+	37587663	37589385	True	NM_014907,NM_001001790,NM_001134485,NM_001134484	chr9,chr9,chr9,chr9	+,-,-,-	FRMPD1,TOMM5,TOMM5,TOMM5	61666,3301,3301,3301
chr22:46731787-46732011	chr22	+	46731884	46731968	True	NR_024009,NM_018006	chr22,chr22	-,+	CN5H6.4,TRMU	-39327,-637
chr1:161338942-161339904	chr1	+	161339089	161339738	True	NM_001013625,NM_003001	chr1,chr1	-,+	C1orf192,SDHC	-1425,-54975
chr4:3444399-3444879	chr4	+	3444400	3444876	True	NM_002337,NM_001528	chr4,chr4	-,+	LRPAP1,HGFAC	89398,-725
chr13:28495738-28496033	chr13	+	28495865	28496063	True	NM_000209,NM_001265	chr13,chr13	+,-	PDX1,CDX2	-1748,47304
chr12:57509187-57510795	chr12	+	57509734	57510677	True	NM_002332,NM_003153,NR_033659,NM_001178078,NM_001178080,NM_001178081,NM_001178079	chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,-,-,-,-,-,-	LRP1,STAT6,STAT6,STAT6,STAT6,STAT6,STAT6	11604,-4538,-4538,-4538,-4538,-4538,-5645
chr7:20826593-20827369	chr7	+	20826682	20827410	True	NM_182700,NR_026673,NM_198956	chr7,chr7,chr7	-,+,-	SP8,RPL23P8,SP8	-174,39506,-174
chr1:28500759-28501070	chr1	+	28500837	28501059	True	NM_016311,NM_001164723,NM_000952	chr1,chr1,chr1	+,-,-	ATPIF1,PTAFR,PTAFR	61542,2177,2448
chr18:55810992-55811719	chr18	+	55811043	55811491	True	NM_005603,NM_001144965,NM_001144971,NM_001144969,NM_001144968	chr18,chr18,chr18,chr18,chr18	-,+,+,+,+	ATP8B1,NEDD4L,NEDD4L,NEDD4L,NEDD4L	-340716,5073,5073,5073,5073
chr4:145561874-145562988	chr4	+	145561944	145562815	True	NR_037595,NM_022475	chr4,chr4	-,+	LOC646576,HHIP	4413,4332
chr5:78922423-78922875	chr5	+	78922569	78922684	True	NM_004272,NM_173797	chr5,chr5	-,+	HOMER1,PAPD4	-112869,-14386
chr12:132903899-132904154	chr12	+	132903909	132904189	True	NM_001122636,NR_024563	chr12,chr12	-,+	GALNT9,LOC100130238	1766,-51983
chr15:75228523-75229263	chr15	+	75228707	75228953	True	NM_002435,NM_004255	chr15,chr15	+,-	MPI,COX5A	-46352,1600
chr9:86310204-86310945	chr9	+	86310552	86310801	True	NM_013438,NM_001190727	chr9,chr9	-,+	UBQLN1,C9orf103	12432,-72571
chr5:102210642-102211055	chr5	+	102210669	102210759	True	NM_138821,NM_138822,NM_001177306,NR_033440,NM_017676,NM_138766,NM_000919	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,-,+,+	PAM,PAM,PAM,PAM,GIN1,PAM,PAM	-9204,-9204,-9204,-9204,245145,-9204,-9204
chr5:137910950-137911207	chr5	+	137910989	137911255	True	NM_001964,NM_004134	chr5,chr5	+,-	EGR1,HSPA9	-109859,113
chr5:5392035-5392999	chr5	+	5392174	5393027	True	NM_015325,NR_028351	chr5,chr5	+,-	KIAA0947,FLJ33360	29779,944429
chr15:52471949-52472158	chr15	+	52471948	52472138	True	NM_006578,NM_002748	chr15,chr15	-,+	GNB5,MAPK6	74,-160588
chr11:71258503-71259290	chr11	+	71258507	71259287	True	NM_021046,NM_005553,NM_001005405	chr11,chr11,chr11	+,+,-	KRTAP5-8,KRTAP5-9,KRTAP5-11	-9487,178,34686
chr2:72374775-72374992	chr2	+	72374817	72374963	True	NM_019885,NM_001130987	chr2,chr2	-,+	CYP26B1,DYSF	50,-681036
chr19:51471038-51471765	chr19	+	51471040	51471678	True	NM_005551,NM_002774,NM_001012965,NM_001012964	chr19,chr19,chr19,chr19	+,-,-,-	KLK2,KLK6,KLK6,KLK6	-94402,1301,419,419
chr7:155415780-155416598	chr7	+	155415842	155416388	True	NM_001103176,NM_053043	chr7,chr7	-,+	CNPY1,RBM33	-89303,20814
chr19:57079436-57080178	chr19	+	57079504	57080197	True	NM_001001668,NR_030740	chr19,chr19	+,-	ZNF470,ZNF667	-665,-90734
chr1:33546807-33547049	chr1	+	33546857	33546917	True	NR_037592,NM_052998	chr1,chr1	-,+	AK2,ADC	-44345,-194
chr7:91591945-91592922	chr7	+	91591991	91592618	True	NM_006980,NM_147185	chr7,chr7	-,+	MTERF,AKAP9	-81975,-21859
chrX:6452122-6452340	chrX	+	6452187	6452265	True	NM_000351,NM_016379	chrX,chrX	+,-	STS,VCX3A	685206,944
chrX:6452122-6452340	chrX	-	7811517	7811595	False	NM_013452,NM_004650	chrX,chrX	+,-	VCX,PNPLA4	-1265,83930
chrX:6452122-6452340	chrX	+	8138333	8138411	False	NR_030380,NM_016378	chrX,chrX	+,-	MIR651,VCX2	-43378,947
chrX:6452122-6452340	chrX	-	8433764	8433842	False	NM_001001888,NM_000216	chrX,chrX	+,-	VCX3B,KAL1	-944,266435
chr8:73999456-74000800	chr8	+	73999542	74000330	True	NM_153225,NM_017489	chr8,chr8	-,+	C8orf84,TERF1	5227,-78496
chr14:90084718-90084976	chr14	+	90084777	90084963	True	NR_024620,NM_001085471	chr14,chr14	+,-	PRO1768,FOXN3	-42279,585
chr20:35722339-35723628	chr20	+	35722417	35723583	True	NM_002895,NM_183404,NM_001135771	chr20,chr20,chr20	-,-,+	RBL1,RBL1,RPN2	877,877,83872
chr8:82635636-82637385	chr8	+	82635929	82637135	True	NM_001170797,NM_001170796,NM_024699,NR_033196,NR_033194,NR_033195,NR_033193,NM_152284	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,-,-,-,+	ZFAND1,ZFAND1,ZFAND1,ZFAND1,ZFAND1,ZFAND1,ZFAND1,CHMP4C	-2390,-2390,-2390,-2390,-2390,-2390,-2390,7552
chr20:37213010-37213711	chr20	+	37213014	37213368	True	NM_001018082,NR_027241	chr20,chr20	+,-	ADIG,LOC388796	-3232,-148996
chr5:145583805-145584551	chr5	+	145583825	145584451	True	NM_020117,NM_018989	chr5,chr5	-,+	LARS,RBM27	-21531,-713
chr17:47654749-47655229	chr17	+	47654756	47655186	True	NM_001007226,NM_007225	chr17,chr17	-,+	SPOP,NXPH3	100389,-1509
chr1:42843933-42845156	chr1	+	42843962	42844992	True	NM_001198850,NM_173642	chr1,chr1	-,+	FOXJ3,RIMKLA	-42414,1475
chr12:106751892-106752115	chr12	+	106751891	106752011	True	NM_018082,NM_001160708,NM_006825	chr12,chr12,chr12	+,+,-	POLR3B,POLR3B,CKAP4	-506,-82,-110178
chr2:241569343-241569866	chr2	+	241569418	241569914	True	NM_005301,NM_001102467	chr2,chr2	+,-	GPR35,AQP12B	-4807,52453
chrX:108981080-108982276	chrX	+	108981355	108982084	True	NM_004458,NM_022977,NM_018698	chrX,chrX,chrX	-,-,+	ACSL4,ACSL4,NXT2	-4734,-4734,-202410
chr10:118364498-118365959	chr10	+	118364545	118365862	True	NM_005396,NM_006229,NM_144661	chr10,chr10,chr10	+,+,-	PNLIPRP2,PNLIPRP1,C10orf82	14602,-14124,63669
chr7:134212337-134213670	chr7	+	134212596	134213698	True	NM_001628,NM_020299	chr7,chr7	-,+	AKR1B1,AKR1B10	-68708,-303
chr2:38827432-38827730	chr2	+	38827436	38827599	True	NM_001142650,NM_138801,NM_138394	chr2,chr2,chr2	-,+,-	HNRPLL,GALM,HNRPLL	2630,65452,2630
chr13:98828635-98829046	chr13	+	98828689	98828859	True	NM_178861,NR_036129	chr13,chr13	-,+	RNF113B,MIR3170	712,31918
chr1:200641265-200641937	chr1	+	200641458	200641761	True	NM_203459,NM_001031725	chr1,chr1	+,-	CAMSAP1L1,DDX59	66924,-2332
chr19:58697117-58697442	chr19	+	58697221	58697445	True	NM_024620,NM_016325,NM_133502,NM_016324	chr19,chr19,chr19,chr19	-,+,+,+	ZNF329,ZNF274,ZNF274,ZNF274	-35073,-2877,-2877,-2877
chr22:21387056-21387495	chr22	+	21387086	21387372	True	NM_004173,NR_027006	chr22,chr22	-,+	SLC7A4,LOC400891	-239,12876
chr2:85806580-85807074	chr2	+	85806585	85807015	True	NM_003761,NM_001142269,NM_006634	chr2,chr2,chr2	+,-,+	VAMP8,GGCX,VAMP5	-2022,-17928,4515
chr6:71277681-71278709	chr6	+	71277709	71278533	True	NM_145267,NM_001851	chr6,chr6	+,-	C6orf57,COL9A1	-1144,-264923
chr13:49821955-49822216	chr13	+	49821990	49822186	True	NM_001193478,NM_030925,NM_030911,NR_036439	chr13,chr13,chr13,chr13	+,-,+,+	CDADC1,CAB39L,CDADC1,CDADC1	6,153599,6,6
chr11:6704582-6704904	chr11	+	6704592	6704710	True	NM_001014795,NM_022061	chr11,chr11	+,-	ILK,MRPL17	-79436,4
chr4:48017049-48018489	chr4	+	48017269	48018535	True	NM_000087,NM_207330	chr4,chr4	-,+	CNGA1,NIPAL1	-2308,255
chr9:130891026-130891485	chr9	+	130891034	130891530	True	NR_027811,NR_027812,NR_024425,NM_025072	chr9,chr9,chr9,chr9	-,-,+,-	PTGES2,PTGES2,LOC389791,PTGES2	-322,-322,-277,-560
chr11:117102097-117102475	chr11	+	117102207	117102485	True	NM_004716,NM_207343,NM_001077239	chr11,chr11,chr11	-,+,+	PCSK7,RNF214,RNF214	376,918,966
chr8:56011240-56012769	chr8	+	56011651	56012690	True	NM_052898,NR_027765	chr8,chr8	+,-	XKR4,SBF1P1	2326,355241
chr17:33481812-33482089	chr17	+	33481842	33482076	True	NM_173167,NM_018096,NM_001033576	chr17,chr17,chr17	+,-,+	UNC45B,NLE1,UNC45B	-7059,-12520,-7059
chr2:183893767-183893976	chr2	+	183893859	183894028	True	NM_013436,NM_001142314,NM_205842	chr2,chr2,chr2	-,+,-	NCKAP1,DUSP19,NCKAP1	9254,49258,9254
chr14:101038214-101038512	chr14	+	101038227	101038479	True	NR_024096,NM_001159531,NM_020836	chr14,chr14,chr14	+,-,-	C14orf70,BEGAIN,BEGAIN	85125,-3820,-2096
chr3:53107744-53108031	chr3	+	53107883	53108011	True	NM_016329,NM_006254	chr3,chr3	-,+	SFMBT1,PRKCD	-27794,87211
chr2:37891171-37891868	chr2	+	37891697	37891911	True	NM_006449,NM_001170791	chr2,chr2	-,+	CDC42EP3,FAM82A1	7465,260550
chr10:17655776-17656414	chr10	+	17655775	17656057	True	NM_003473,NM_014241	chr10,chr10	+,-	STAM,PTPLA	30066,3366
chr5:43042682-43043089	chr5	+	43042722	43043086	True	NM_001014279,NR_015447	chr5,chr5	-,+	C5orf39,LOC153684	-2275,-537
chr1:109632990-109633402	chr1	+	109633229	109633325	True	NM_020141,NR_003023,NM_005645	chr1,chr1,chr1	+,+,-	TMEM167B,SCARNA2,TAF13	77,9489,-14605
chr2:145276606-145277609	chr2	+	145276634	145277630	True	NR_033258,NM_001171653,NR_033870,NM_014795	chr2,chr2,chr2,chr2	-,-,+,-	ZEB2,ZEB2,DKFZp686O1327,ZEB2	378,378,147903,378
chr9:140485238-140485452	chr9	+	140485250	140485440	True	NM_152285,NM_138462	chr9,chr9	+,-	ARRDC1,ZMYND19	14655,-313
chr3:111697289-111698140	chr3	+	111697445	111698111	True	NM_001190259,NM_018394	chr3,chr3	-,+	GCET2,ABHD10	154091,36
chr7:107767662-107768434	chr7	+	107767761	107768425	True	NM_007356,NM_000108	chr7,chr7	-,+	LAMB4,DLD	2426,-236226
chr1:202831283-202831697	chr1	+	202831344	202831716	True	NM_002871,NR_002929	chr1,chr1	-,+	RABIF,LOC148709	26597,-520
chr3:145880655-145881026	chr3	+	145880736	145880939	True	NM_182943,NM_000935,NM_003412	chr3,chr3,chr3	-,-,+	PLOD2,PLOD2,ZIC1	-1454,-1454,1246241
chr16:89940637-89940995	chr16	+	89940641	89941041	True	NM_001018112,NM_014972	chr16,chr16	-,+	FANCA,TCF25	-57576,-698
chr7:27228321-27228567	chr7	+	27228331	27228605	True	NM_005523,NR_002795,NM_153715,NR_037940,NR_037939	chr7,chr7,chr7,chr7,chr7	-,+,-,-,-	HOXA11,HOXA11-AS1,HOXA10,HOXA10-HOXA9,HOXA10	-3496,-3355,-8455,-8451,-8451
chr22:30939436-30939880	chr22	+	30939440	30939856	True	NM_001193336,NM_000355	chr22,chr22	-,+	LOC730005,TCN2	2865,63213
chr15:65320858-65321443	chr15	+	65321053	65321371	True	NM_178859,NM_139242	chr15,chr15	+,-	OSTBETA,MTFMT	16336,656
chr4:7047187-7047894	chr4	+	7047186	7047830	True	NM_153376,NM_152293,NR_033828	chr4,chr4,chr4	-,+,-	CCDC96,TADA2B,LOC100129931	-2458,-2081,178
chr22:40571082-40571989	chr22	+	40571605	40572025	True	NM_152512,NM_001162501,NM_015088	chr22,chr22,chr22	-,+,+	ENTHD1,TNRC6B,TNRC6B	-281811,1903,1903
chr1:20139812-20140858	chr1	+	20140019	20140735	True	NM_015207,NM_019062	chr1,chr1	+,-	OTUD3,RNF186	68152,1086
chr19:39570776-39571097	chr19	+	39571073	39571153	True	NM_178820,NM_001004318	chr19,chr19	-,+	FBXO27,PAPL	-47875,3791
chr4:183740299-183740511	chr4	+	183740338	183740408	True	NR_003612,NM_001012732	chr4,chr4	+,-	FAM92A3,DCTD	218409,98272
chr16:18493254-18493896	chr16	+	18493351	18493893	True	NR_036142,NR_003569,NR_036141,NR_036144	chr16,chr16,chr16,chr16	-,+,-,-	MIR3180-2,ABCC6P1,MIR3180-1,MIR3180-3	2281,88676,2285,2285
chr16:18493254-18493896	chr16	+	2183456	2183958	False	NM_001009944,NM_000296,NR_037467,NM_014353	chr16,chr16,chr16,chr16	-,-,-,+	PKD1,PKD1,MIR3180-5,RAB26	1991,1991,2222,14692
chr16:18493254-18493896	chr16	-	16405967	16406509	False	NR_036142,NR_036447,NR_036141,NM_001079528,NR_036144	chr16,chr16,chr16,chr16,chr16	+,+,+,-,+	MIR3180-2,PKD1P1,MIR3180-1,ABCC6,MIR3180-3	-2282,4956,-2286,-88639,-2286
chr16:18493254-18493896	chr16	-	15007311	15007855	False	NR_036142,NR_023387,NR_036141,NR_036144	chr16,chr16,chr16,chr16	+,-,+,+	MIR3180-2,ABCC6P2,MIR3180-1,MIR3180-3	-2281,-88752,-2285,-2285
chr16:18493254-18493896	chr16	+	15246117	15246659	False	NM_015027,NR_037466	chr16,chr16	+,-	PDXDC1,MIR3180-4	-177533,2250
chr16:2653713-2654025	chr16	+	2653719	2653971	True	NR_036139,NR_015441	chr16,chr16	-,+	MIR3178,LOC652276	-71713,-385
chr9:79791781-79792238	chr9	+	79791786	79791944	True	NM_001018037,NM_015186,NM_033305,NR_026668,NM_001018038	chr9,chr9,chr9,chr9,chr9	+,+,+,-,+	VPS13A,VPS13A,VPS13A,LOC100286938,VPS13A	416,416,416,939,416
chr4:83956073-83956552	chr4	+	83956078	83956552	True	NM_016129,NM_001115007	chr4,chr4	+,-	COPS4,LIN54	-46,-22038
chr10:30024882-30025111	chr10	+	30024898	30024960	True	NM_003174,NR_003930	chr10,chr10	-,+	SVIL,LOC387647	-168,-326448
chr1:160606461-160607284	chr1	+	160606554	160607318	True	NM_021181,NM_003037	chr1,chr1	+,-	SLAMF7,SLAMF1	101758,9813
chr17:8286307-8286526	chr17	+	8286423	8286575	True	NM_000987,NM_153007	chr17,chr17	-,+	RPL26,ODF4	40,-43286
chr20:55901368-55901661	chr20	+	55901431	55901677	True	NM_198265,NM_012444,NR_036219	chr20,chr20,chr20	+,+,-	SPO11,SPO11,MIR4325	3153,3153,-4784
chr6:99838611-99839245	chr6	+	99838722	99839290	True	NM_017421,NM_001195131	chr6,chr6	-,+	COQ3,LOC100130890	2842,129579
chr7:151038378-151038588	chr7	+	151038519	151038609	True	NM_016118,NM_003078	chr7,chr7	+,-	NUB1,SMARCD3	248,-64288
chr19:1651006-1651266	chr19	+	1651005	1651216	True	NM_003200,NM_001136139,NM_001080488	chr19,chr19,chr19	-,-,+	TCF3,TCF3,ONECUT3	1163,-719,102445
chr22:44893213-44893615	chr22	+	44893234	44893492	True	NR_028409,NM_032287	chr22,chr22	+,-	NCRNA00207,LDOC1L	71727,563
chr9:17135943-17136418	chr9	+	17135955	17136318	True	NM_017637,NM_001114395,NM_017738	chr9,chr9,chr9	-,+,+	BNC2,CNTLN,CNTLN	-265169,-975,-975
chr1:149755838-149756523	chr1	+	149755907	149756059	True	NM_001161334,NM_000566	chr1,chr1	-,+	HIST2H2BF,FCGR1A	27919,-1708
chr1:149755838-149756523	chr1	-	120934234	120934284	False	NM_001004340,NR_027337,NM_001017986	chr1,chr1,chr1	-,+,-	FCGR1B,HIST2H2BA,FCGR1B	1710,-28251,1710
chr16:4324637-4325090	chr16	+	4324852	4324920	True	NM_032575,NM_003223	chr16,chr16	+,-	GLIS2,TFAP4	57304,-1851
chr9:127268105-127268870	chr9	+	127268259	127268847	True	NM_004959,NM_001161808	chr9,chr9	-,+	NR5A1,GPR144	902,-54888
chr3:161048332-161050008	chr3	+	161048461	161049764	True	NM_015938,NM_001040100	chr3,chr3	+,-	NMD3,C3orf57	-109420,40166
chr11:61892053-61892279	chr11	+	61892083	61892268	True	NM_001040694,NM_002032,NM_020238	chr11,chr11,chr11	+,-,+	INCENP,FTH1,INCENP	-689,-156951,-689
chr4:134069180-134069504	chr4	+	134069274	134069542	True	NM_032961,NM_001114734,NM_020815	chr4,chr4,chr4	+,-,+	PCDH10,PABPC4L,PCDH10	927,1053411,927
chr8:92179180-92179613	chr8	+	92179186	92179536	True	NM_001129890,NM_018710	chr8,chr8	+,-	LRRC69,TMEM55A	-64391,-125983
chr1:19533977-19534677	chr1	+	19534144	19534656	True	NM_020765,NM_016183	chr1,chr1	-,+	UBR4,MRTO4	2140,43418
chr14:23339687-23340649	chr14	+	23339844	23340661	True	NM_001077351,NM_014045	chr14,chr14	-,+	RBM23,LRP10	47785,298
chr7:100423015-100423956	chr7	+	100423112	100423966	True	NM_020246,NM_004444	chr7,chr7	+,-	SLC12A9,EPHB4	26391,1227
chr4:142145449-142146363	chr4	+	142145471	142146395	True	NM_020724,NM_014487	chr4,chr4	-,+	RNF150,ZNF330	-90855,-3474
chr12:133463411-133463731	chr12	+	133463508	133463699	True	NM_018223,NM_019591,NM_001161346,NM_001161347,NM_001161344,NM_001161345	chr12,chr12,chr12,chr12,chr12,chr12	-,+,-,-,-,-	CHFR,ZNF26,CHFR,CHFR,CHFR,CHFR	556,99356,556,556,556,556
chr1:228595165-228595890	chr1	+	228595169	228595755	True	NM_001024940,NM_175055,NM_001134855,NM_145214,NM_016102	chr1,chr1,chr1,chr1,chr1	-,+,-,-,-	TRIM17,HIST3H2BB,TRIM17,TRIM11,TRIM17	8888,50052,8888,-652,8888
chr1:212004098-212004501	chr1	+	212004293	212004550	True	NM_016448,NM_014873	chr1,chr1	+,-	DTL,LPGAT1	204368,-179
chr9:14904737-14905743	chr9	+	14904818	14905601	True	NR_003920,NM_144966	chr9,chr9	+,-	LOC389705,FREM1	87723,5449
chrX:64196964-64197538	chrX	+	64197039	64197336	True	NM_018684,NM_001178033,NM_001010888	chrX,chrX,chrX	-,-,+	ZC4H2,ZC4H2,ZC3H12B	-626,-626,511278
chr2:238875378-238875659	chr2	+	238875416	238875642	True	NM_080678,NR_037904,NM_030768	chr2,chr2,chr2	+,+,-	UBE2F,UBE2F-SCLY,ILKAP	-3,-3,236732
chr12:113863354-113863716	chr12	+	113863436	113863514	True	NM_138432,NM_006843	chr12,chr12	+,-	SDSL,SDS	-3271,-21744
chr17:25958165-25958671	chr17	+	25958212	25958704	True	NM_000625,NM_009587,NM_002308,NR_024043	chr17,chr17,chr17,chr17	-,+,+,+	NOS2,LGALS9,LGALS9,LGALS9	168901,-89,-89,-89
chr16:69215921-69216213	chr16	+	69215938	69216090	True	NM_006750,NR_033227	chr16,chr16	+,-	SNTB2,CHTF8	4959,-49445
chr18:30049890-30050149	chr18	+	30049889	30050099	True	NR_003558,NM_022751	chr18,chr18	+,-	WBP11P1,FAM59A	41526,399
chr11:60929201-60930186	chr11	+	60929222	60930168	True	NM_001079807,NM_017966	chr11,chr11	+,-	PGA3,VPS37C	40815,-306
chr12:58183944-58185086	chr12	+	58184149	58185137	True	NM_023033,NM_001172697,NM_001172695,NM_001172696,NM_005726	chr12,chr12,chr12,chr12,chr12	-,+,+,+,+	METTL1,TSFM,TSFM,TSFM,TSFM	-18235,-7672,-7672,-7672,-7672
chr6:25666438-25666844	chr6	+	25666633	25666879	True	NM_170745,NM_006998	chr6,chr6	-,+	HIST1H2AA,SCGN	59973,-14269
chr12:132311838-132312602	chr12	+	132312001	132312439	True	NM_175066,NM_016155	chr12,chr12	-,+	DDX51,MMP17	316491,501
chr4:48026454-48026745	chr4	+	48026588	48026792	True	NM_000087,NM_207330	chr4,chr4	-,+	CNGA1,NIPAL1	-11627,-7849
chr6:43397473-43398649	chr6	+	43398162	43398466	True	NM_023932,NM_033450,NM_001198934	chr6,chr6,chr6	-,+,+	DLK2,ABCC10,ABCC10	24884,1022,-2924
chr2:145089008-145089371	chr2	+	145089011	145089371	True	NR_033870,NM_001164629	chr2,chr2	+,-	DKFZp686O1327,GTDC1	336162,762
chr16:30261471-30262493	chr16	+	30261981	30262187	True	NR_002555,NM_177552	chr16,chr16	-,+	LOC613037,SULT1A3	-5049,-51491
chr16:30261471-30262493	chr16	+	29521999	29522205	False	NR_002557,NM_177552	chr16,chr16	-,+	LOC613038,SULT1A3	-43100,-50851
chr16:30261471-30262493	chr16	-	22519825	22520031	False	NM_001135865,NR_027460	chr16,chr16	+,-	LOC100132247,RRN3P3	4812,-70789
chr16:30261471-30262493	chr16	+	21441514	21441720	False	NR_024456,NR_026675,NM_130464	chr16,chr16,chr16	-,+,-	LOC100190986,NCRNA00169,NPIPL3	4106,-129403,-4856
chr16:30261471-30262493	chr16	+	21873792	21873998	False	NM_003366,NR_003370	chr16,chr16	+,-	UQCRC2,RRN3P1	90610,-43297
chr14:24581527-24582930	chr14	+	24582669	24582973	True	NM_016049,NM_001163484,NM_181357,NR_028100,NR_028099,NM_025230	chr14,chr14,chr14,chr14,chr14,chr14	-,+,+,+,+,+	FAM158A,DCAF11,DCAF11,DCAF11,DCAF11,DCAF11	27874,932,1520,1518,1012,1012
chr11:99022259-99022498	chr11	+	99022258	99022385	True	NM_175566,NM_001202474	chr11,chr11	+,-	CNTN5,PGR	-130445,1977464
chr11:75064714-75065050	chr11	+	75064729	75064821	True	NM_020251,NM_004041,NM_001005	chr11,chr11,chr11	-,-,+	ARRB1,ARRB1,RPS3	-1854,-1854,45740
chr1:151816835-151818361	chr1	+	151816836	151818080	True	NR_024237,NM_182578,NM_001136003	chr1,chr1,chr1	+,-,-	LOC100132111,THEM5,C2CD4D	-5942,8148,-3803
chr2:20422935-20423260	chr2	+	20422969	20423269	True	NM_004040,NM_002997,NM_001006946	chr2,chr2,chr2	+,-,-	RHOB,SDC1,SDC1	223565,1708,1975
chrY:10019867-10020367	chrY	+	10019881	10020302	True	NR_003593,NR_003589	chrY,chrY	+,-	TTTY23B,TTTY1B	-271525,-407953
chr9:127632175-127632634	chr9	+	127632425	127632645	True	NM_007209,NM_030978	chr9,chr9	-,+	RPL35,ARPC5L	-8185,-992
chr12:113771939-113772723	chr12	+	113771955	113772741	True	NM_001159727,NM_024959	chr12,chr12	+,-	PLBD2,SLC24A6	23629,234
chr19:344990-345220	chr19	+	345022	345244	True	NM_017550,NM_130760	chr19,chr19	-,+	MIER2,MADCAM1	-231,151245
chr20:35503172-35503981	chr20	+	35503313	35503709	True	NM_080628,NM_080627	chr20,chr20	+,-	C20orf118,KIAA0889	860,-11226
chr11:64613336-64614439	chr11	+	64613914	64614074	True	NM_017525,NM_006244	chr11,chr11	-,+	CDC42BPG,PPP2R5B	-1873,78068
chr2:174654241-174654924	chr2	+	174654252	174654918	True	NM_145810,NM_001017371	chr2,chr2	+,-	CDCA7,SP3	-434742,174079
chrX:24479123-24480527	chrX	+	24479716	24479906	True	NM_001136233,NM_005391,NM_001142386	chrX,chrX,chrX	-,+,+	FAM48B2,PDK3,PDK3	-148284,3437,3437
chr20:31791010-31792627	chr20	+	31791248	31792506	True	NM_016082,NR_026760	chr20,chr20	-,+	CDK5RAP1,BASE	196881,-9895
chr5:137665946-137666287	chr5	+	137665989	137666184	True	NM_001135647,NM_001790,NM_022809,NM_016605	chr5,chr5,chr5,chr5	+,-,-,+	FAM53C,CDC25C,CDC25C,FAM53C	7039,1393,1393,7519
chr10:135268428-135269188	chr10	+	135268447	135269225	True	NR_002934,NM_001012508	chr10,chr10	+,-	LOC619207,SPRN	-1073,-30326
chr9:2814333-2814914	chr9	+	2814545	2814951	True	NM_133497,NM_014878	chr9,chr9	+,-	KCNV2,KIAA0020	-97076,29229
chr19:45417035-45417464	chr19	+	45417184	45417244	True	NM_145288,NM_001645,NM_000041	chr19,chr19,chr19	-,+,+	ZNF296,APOC1,APOE	162494,676,-8196
chr19:8933875-8934705	chr19	+	8933968	8934710	True	NM_145208,NM_144693	chr19,chr19	+,-	MBD3L1,ZNF558	18558,-403
chr5:138938032-138938731	chr5	+	138938162	138938711	True	NM_003339,NM_181838,NM_198282	chr5,chr5,chr5	+,+,-	UBE2D2,UBE2D2,TMEM173	2039,2039,-75819
chrX:106238585-106239841	chrX	+	106238591	106239759	True	NM_001085354,NM_020384,NM_024657	chrX,chrX,chrX	-,+,-	MORC4,CLDN2,MORC4	3765,-75036,3765
chr12:52305473-52306866	chr12	+	52305474	52306787	True	NM_001077401,NM_000020,NM_001013690	chr12,chr12,chr12	+,+,-	ACVRL1,ACVRL1,FIGNL2	46,-4323,-79773
chr1:161630786-161631877	chr1	+	161631127	161631909	True	NM_004001,NM_001002273,NM_001190828,NM_001002274,NM_001002275,NR_002595	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-	FCGR2B,FCGR2B,FCGR2B,FCGR2B,FCGR2B,RPL31P11	995,995,995,995,995,23183
chr1:161630786-161631877	chr1	+	161549379	161550038	False	NM_201563,NM_001127596	chr1,chr1	+,-	FCGR2C,FCGR3A	1090,-28966
chr9:111696470-111696684	chr9	+	111696469	111696710	True	NM_017832,NM_003640	chr9,chr9	+,-	C9orf6,IKBKAP	-38,-52
chr19:14682331-14682791	chr19	+	14682493	14682615	True	NM_004146,NM_001204118	chr19,chr19	-,+	NDUFB7,CLEC17A	324,11280
chr10:5530778-5531586	chr10	+	5530867	5531563	True	NM_017422,NM_005185	chr10,chr10	-,+	CALML5,CALML3	10020,35360
chr19:55922301-55922668	chr19	+	55922311	55922655	True	NM_000991,NM_014501	chr19,chr19	+,-	RPL28,UBE2S	-25062,-2986
chr9:5009978-5010479	chr9	+	5010053	5010330	True	NM_007179,NM_004972	chr9,chr9	-,+	INSL6,JAK2	175344,-24866
chr1:110050331-110050906	chr1	+	110050356	110050838	True	NM_182580,NM_020703	chr1,chr1	+,-	CYB561D1,AMIGO1	-13706,1548
chr7:75368321-75368537	chr7	+	75368326	75368539	True	NM_001040456,NM_005338	chr7,chr7	+,-	RHBDD2,HIP1	139777,-47
chrX:77565288-77566906	chrX	+	77565415	77566881	True	NM_006639,NM_000291	chrX,chrX	-,+	CYSLTR1,PGK1	16256,-205810
chr17:78077307-78077534	chr17	+	78077358	78077484	True	NM_001079804,NM_001079803,NM_014740,NM_000152	chr17,chr17,chr17,chr17	+,+,-,+	GAA,GAA,EIF4A3,GAA	-2060,-2060,43548,-2060
chr1:247581897-247582547	chr1	+	247582015	247582359	True	NM_183395,NM_001079821,NM_004895,NM_001127461,NM_001004492,NM_001127462	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,-,+	NLRP3,NLRP3,NLRP3,NLRP3,OR2B11,NLRP3	-715,-2608,-715,-2608,32975,-715
chr4:77367910-77368144	chr4	+	77367922	77368182	True	NM_001042784,NM_020859	chr4,chr4	-,+	CCDC158,SHROOM3	-39464,-11720
chr19:19052892-19054146	chr19	+	19052978	19054173	True	NM_004838,NR_027297,NM_001145722,NM_001145721,NR_033677,NM_001145724	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,+,-	HOMER3,HOMER3,HOMER3,HOMER3,DDX49,HOMER3	-937,-2534,-1865,-1817,-22545,-3120
chr18:9486381-9488237	chr18	+	9486627	9488143	True	NM_001042388,NM_006788	chr18,chr18	-,+	PPP4R1,RALBP1	126507,-11158
chr2:158454399-158455566	chr2	+	158454410	158455498	True	NM_014568,NM_001111031	chr2,chr2	+,-	GALNT5,ACVR1C	-340130,-338
chr14:23624429-23625298	chr14	+	23624511	23625183	True	NM_017924,NM_182728	chr14,chr14	+,-	C14orf119,SLC7A8	-59774,-901
chr20:446349-447065	chr20	+	446349	447095	True	NM_144628,NM_031229	chr20,chr20	-,+	TBC1D20,RBCK1	-3162,-57691
chr3:136538359-136538876	chr3	+	136538586	136538854	True	NM_001097599,NM_005862,NM_001097600,NM_025246	chr3,chr3,chr3,chr3	+,-,+,+	TMEM22,STAG1,TMEM22,TMEM22	-776,-67341,-776,-776
chr6:15076085-15077653	chr6	+	15076386	15077648	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	168878,585691
chr16:30320694-30321253	chr16	+	30320801	30320946	True	NM_013292,NR_002473	chr16,chr16	+,-	MYLPF,LOC440354	65176,-3557
chr7:28471264-28472043	chr7	+	28471363	28472027	True	NM_004904,NM_175061	chr7,chr7	+,-	CREB5,JAZF1	3206,-250926
chr6:26430739-26431072	chr6	+	26430825	26431113	True	NR_027795,NM_197974,NM_006994,NM_003543	chr6,chr6,chr6,chr6	+,+,+,-	BTN2A3,BTN3A3,BTN3A3,HIST1H4H	-9257,9586,9586,-145098
chr9:32548446-32549027	chr9	+	32548560	32549034	True	NM_001195622,NM_005802,NR_033992,NR_033991	chr9,chr9,chr9,chr9	-,-,+,+	TOPORS,TOPORS,LOC100129250,LOC100129250	3648,3648,2736,2107
chr18:77746935-77748066	chr18	+	77747161	77747934	True	NM_001136180,NM_006701	chr18,chr18	+,-	HSBP1L1,TXNL4A	-22643,654
chr3:9694842-9695402	chr3	+	9694950	9695380	True	NM_001077526,NM_198560,NM_022485,NM_001077525	chr3,chr3,chr3,chr3	+,-,+,+	MTMR14,LHFPL4,MTMR14,MTMR14	-3890,-99464,-3890,-3890
chr9:35751275-35752050	chr9	+	35751483	35752085	True	NM_020944,NM_001080496,NM_001044264	chr9,chr9,chr9	-,+,-	GBA2,RGP1,MSMP	-2258,-2257,2239
chr7:16789029-16790080	chr7	+	16789313	16790071	True	NM_006408,NM_014399	chr7,chr7	-,+	AGR2,TSPAN13	54717,3279
chr13:24464098-24465895	chr13	+	24464102	24465631	True	NM_001135816,NM_005932,NM_001014442,NM_001007537	chr13,chr13,chr13,chr13	+,-,+,-	PCOTH,MIPEP,PCOTH,C1QTNF9B	-562,-515,-1126,5544
chr5:74068237-74068449	chr5	+	74068357	74068450	True	NM_014886,NM_032380,NM_170681,NM_170691	chr5,chr5,chr5,chr5	+,-,-,-	NSA2,GFM2,GFM2,GFM2	-5305,-5315,-5315,-5315
chr11:62474591-62475782	chr11	+	62474640	62475535	True	NM_001130702,NR_037949,NR_037948,NM_001122955,NM_012202,NM_032667	chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,+,-	BSCL2,BSCL2,BSCL2,BSCL2,GNG3,BSCL2	-853,1611,1611,-65,-181,-853
chr7:77424757-77425547	chr7	+	77424840	77425592	True	NM_032936,NM_001127360,NM_001127358	chr7,chr7,chr7	-,+,+	TMEM60,PHTF2,PHTF2	2207,2516,2516
chr6:5084291-5084538	chr6	+	5084396	5084470	True	NM_001145115,NR_037462	chr6,chr6	+,-	PPP1R3G,MIR3691	1249,64136
chrX:67871780-67872421	chrX	+	67872003	67872236	True	NM_014725,NM_002547,NM_001142503	chrX,chrX,chrX	+,-,+	STARD8,OPHN1,STARD8	-4550,-218704,-4550
chr17:7451889-7452228	chr17	+	7451888	7452032	True	NM_172087,NM_003808,NM_003809,NM_172089,NM_172088,NM_006942,NM_001198624,NM_001198623,NM_001198622,NR_037146	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,-,+,+,+,+	TNFSF13,TNFSF13,TNFSF12,TNFSF12-TNFSF13,TNFSF13,SOX15,TNFSF13,TNFSF13,TNFSF13,TNFSF12	9576,9576,342,342,9576,41506,9576,9576,9576,342
chr5:154241551-154241802	chr5	+	154241567	154241771	True	NM_032385,NM_004779	chr5,chr5	-,+	C5orf4,CNOT8	-11354,-3428
chr1:241801698-241802899	chr1	+	241801809	241802877	True	NM_014322,NM_144625,NM_001821	chr1,chr1,chr1	-,+,-	OPN3,WDR64,CHML	878,12702,-2577
chr7:140179441-140180049	chr7	+	140179447	140179873	True	NM_013446,NM_001008749,NM_001145125	chr7,chr7,chr7	-,+,-	MKRN1,RAB19,MKRN1	-78,-75655,-78
chr17:6982181-6982703	chr17	+	6982290	6982552	True	NM_182906,NM_006344,NM_201566	chr17,chr17,chr17	-,-,+	CLEC10A,CLEC10A,SLC16A13	1102,1102,-42947
chr10:126429501-126431092	chr10	+	126429672	126431008	True	NM_032182,NM_014661	chr10,chr10	+,-	FAM175B,FAM53B	59345,1972
chr17:5136758-5137488	chr17	+	5136973	5137237	True	NM_207103,NR_034082	chr17,chr17	-,+	C17orf87,LOC100130950	896,-41645
chr19:20189336-20189561	chr19	+	20189395	20189576	True	NM_033196,NM_007138	chr19,chr19	-,+	ZNF682,ZNF90	-39118,-646
chr12:123943434-123943639	chr12	+	123943443	123943667	True	NM_022717,NM_180699,NM_145058	chr12,chr12,chr12	+,+,-	SNRNP35,SNRNP35,RILPL2	-843,718,-22179
chr1:63786765-63787092	chr1	+	63786875	63787139	True	NM_012183,NM_014288	chr1,chr1	+,-	FOXD3,ITGB3BP	1590,201746
chr20:10199594-10200092	chr20	+	10199703	10200028	True	NM_130811,NM_018848,NM_003081	chr20,chr20,chr20	+,-,+	SNAP25,MKKS,SNAP25	-277,212599,-277
chr19:35939266-35939796	chr19	+	35939265	35939663	True	NM_005306,NM_207392	chr19,chr19	+,-	FFAR2,KRTDAP	953,41743
chr10:43964800-43965203	chr10	+	43965062	43965143	True	NR_026693,NM_001098204	chr10,chr10	+,-	ZNF487P,HNRNPF	-32546,-60366
chr2:71016100-71016722	chr2	+	71016121	71016719	True	NM_001004311,NM_012476	chr2,chr2	-,+	FIGLA,VAX2	1106,111000
chr18:32192060-32192444	chr18	+	32192260	32192462	True	NM_001198940,NM_003787	chr18,chr18	+,-	DTNA,NOL4	-19029,-388745
chr3:160818998-160820880	chr3	+	160819349	160820592	True	NM_001038628,NM_033168,NM_033169,NM_033167,NM_003781,NM_015938	chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,-,+	B3GALNT1,B3GALNT1,B3GALNT1,B3GALNT1,B3GALNT1,NMD3	2625,2625,2148,2625,2625,118506
chr3:18476923-18477886	chr3	+	18477057	18477920	True	NM_001131010,NM_144633	chr3,chr3	-,+	SATB1,KCNH8	2396,712096
chr17:72459845-72460645	chr17	+	72459967	72460404	True	NM_174892,NM_007261	chr17,chr17	-,+	CD300LB,CD300A	67260,2117
chr14:34417303-34418607	chr14	+	34417586	34418640	True	NR_002937,NM_022073	chr14,chr14	+,-	C14orf19,EGLN3	990487,1694
chr14:96860300-96860844	chr14	+	96860466	96860885	True	NM_152327,NM_018036	chr14,chr14	+,-	AK7,ATG2B	-2076,-30788
chr15:57887777-57888193	chr15	+	57887785	57888227	True	NM_152451,NM_001018100,NM_001018091,NM_001018090,NM_170697	chr15,chr15,chr15,chr15,chr15	+,+,+,+,-	GCOM1,GCOM1,GCOM1,GCOM1,ALDH1A2	-3734,-3734,-3734,-3734,418058
chr19:43378921-43379664	chr19	+	43378925	43379594	True	NM_001184826,NM_006905,NR_036584,NM_001184825	chr19,chr19,chr19,chr19	-,-,+,-	PSG1,PSG1,LOC100289650,PSG1	4336,4336,-52961,4336
chr19:43241310-43242963	chr19	+	43241692	43242896	True	NR_036584,NM_021016	chr19,chr19	+,-	LOC100289650,PSG3	83118,1822
chr6:138185396-138187297	chr6	+	138185674	138187341	True	NM_006290,NM_022121	chr6,chr6	+,-	TNFAIP3,PERP	1239,241370
chr13:22201904-22202698	chr13	+	22202114	22202514	True	NM_152726,NM_002010	chr13,chr13	-,+	EFHA1,FGF9	-23759,42700
chr12:105627444-105628917	chr12	+	105627447	105628956	True	NM_018171,NM_001145199	chr12,chr12	-,+	APPL2,C12orf75	1102,95457
chr5:751375-752379	chr5	+	751734	752090	True	NM_018140,NM_007030	chr5,chr5	+,-	CEP72,TPPP	-139380,-58224
chr5:751375-752379	chr5	+	844495	844545	False	NM_001166260,NM_024786	chr5,chr5	+,-	TRIP13,ZDHHC11	48423,6606
chr1:219710024-219711118	chr1	+	219710198	219711018	True	NM_138794,NM_018713	chr1,chr1	+,-	LYPLAL1,SLC30A10	-363057,391027
chr1:9350437-9351335	chr1	+	9350493	9350851	True	NM_025106,NR_029610	chr1,chr1	+,-	SPSB1,MIR34A	2089,-138657
chr13:52769620-52769820	chr13	+	52769624	52769716	True	NR_002816,NM_021645	chr13,chr13	-,+	THSD1P1,UTP14C	-1022,-170848
chr18:32238407-32239745	chr18	+	32238871	32239775	True	NM_001198941,NM_003787	chr18,chr18	+,-	DTNA,NOL4	50420,-435356
chr14:60976919-60977255	chr14	+	60977036	60977296	True	NM_007374,NM_174978	chr14,chr14	+,-	SIX6,C14orf39	-1157,-24272
chr18:9613114-9613734	chr18	+	9613114	9613691	True	NM_006868,NM_005134,NM_001042388	chr18,chr18,chr18	+,-,-	RAB31,PPP4R1,PPP4R1	94536,959,959
chr22:51064353-51064580	chr22	+	51064549	51064611	True	NM_000487,NM_016431,NM_001085428,NM_001085426,NM_001085427,NM_001085425	chr22,chr22,chr22,chr22,chr22,chr22	-,+,-,-,-,-	ARSA,MAPK8IP2,ARSA,ARSA,ARSA,ARSA	2040,-23038,2040,2040,2040,2040
chr3:137844791-137845692	chr3	+	137844841	137845368	True	NM_014154,NM_016161	chr3,chr3	+,-	ARMC8,A4GNT	60779,5922
chr13:25255226-25255563	chr13	+	25255327	25255391	True	NM_001185085,NM_006437,NM_001676	chr13,chr13,chr13	+,-,+	ATP12A,PARP4,ATP12A	-829,-168379,-829
chr7:26580669-26581272	chr7	+	26580777	26581289	True	NR_022006,NM_001145531	chr7,chr7	-,+	KIAA0087,C7orf71	-2333,96200
chr22:46447641-46448441	chr22	+	46447649	46448425	True	NM_018280,NR_027034,NR_027036	chr22,chr22,chr22	-,+,-	C22orf26,LOC150381,LOC100271722	1649,1300,-6901
chr5:179637222-179638931	chr5	+	179637475	179638737	True	NM_015455,NM_175062	chr5,chr5	+,-	CNOT6,RASGEF1C	282679,-1345
chr1:11072032-11072323	chr1	+	11072031	11072249	True	NM_007375,NM_001170754	chr1,chr1	+,-	TARDBP,C1orf127	429,-29937
chr1:59160014-59160362	chr1	+	59160237	59160351	True	NR_034014,NM_001085487	chr1,chr1	+,-	LOC100131060,MYSM1	90471,5448
chr12:56879546-56880344	chr12	+	56879851	56880336	True	NM_013267,NM_207344	chr12,chr12	-,+	GLS2,SPRYD4	1908,-17603
chr19:50194626-50195110	chr19	+	50194636	50195152	True	NM_001101340,NM_001136052,NM_001571,NM_152359,NM_001199752,NM_001199753	chr19,chr19,chr19,chr19,chr19,chr19	+,+,-,+,+,+	C19orf76,CPT1C,IRF3,CPT1C,CPT1C,CPT1C	-2745,-322,-25504,-322,-322,-322
chr3:32146617-32147825	chr3	+	32146799	32147720	True	NM_017784,NM_015141	chr3,chr3	-,+	OSBPL10,GPD1L	-123457,282
chr12:129298003-129299596	chr12	+	129298081	129299561	True	NM_145648,NM_144669	chr12,chr12	-,+	SLC15A4,GLT1D1	9030,38519
chr1:201438135-201438352	chr1	+	201438170	201438326	True	NM_012396,NR_026667	chr1,chr1	-,+	PHLDA3,RPS10P7	23,50705
chr2:201671846-201672185	chr2	+	201671990	201672099	True	NM_001162407,NM_014670	chr2,chr2	-,+	CLK1,BZW1	57242,4547
chr9:123964345-123964632	chr9	+	123964447	123964655	True	NM_001127662,NM_016322	chr9,chr9	+,-	GSN,RAB14	65724,-82
chr7:44119973-44120343	chr7	+	44119976	44120276	True	NM_013284,NM_001129	chr7,chr7	-,+	POLM,AEBP1	1903,23683
chr20:17510938-17511192	chr20	+	17511031	17511197	True	NM_001011546,NM_001195	chr20,chr20	+,-	DSTN,BFSP1	39401,866
chr3:32281438-32281732	chr3	+	32281478	32281715	True	NM_017784,NM_178868	chr3,chr3	-,+	OSBPL10,CMTM8	-258136,-1358
chr6:137533013-137533680	chr6	+	137533024	137533402	True	NM_000416,NM_001008783	chr6,chr6	-,+	IFNGR1,SLC35D3	7215,-289680
chr3:155375242-155375842	chr3	+	155375243	155375863	True	NM_001130960,NM_003875	chr3,chr3	-,+	PLCH1,GMPS	18292,212461
chr9:131418983-131419187	chr9	+	131419003	131419199	True	NM_001122821,NM_052844	chr9,chr9	+,-	SET,WDR34	26734,-14
chr12:107080111-107080793	chr12	+	107080244	107080791	True	NM_001033050,NM_032491	chr12,chr12	-,+	MTERFD3,RFX4	300188,-1813
chr2:98206426-98206666	chr2	+	98206500	98206662	True	NM_025190,NM_001862	chr2,chr2	-,+	ANKRD36B,COX5B	-72,55858
chr2:98206426-98206666	chr2	-	97779102	97779160	False	NM_199336,NM_001164315	chr2,chr2	-,+	FAHD2B,ANKRD36	-18520,72
chr2:98206426-98206666	chr2	+	96657772	96657934	False	NM_207328,NR_003698	chr2,chr2	-,+	GPAT2,LOC729234	42843,18364
chr3:121442598-121444176	chr3	+	121443075	121444070	True	NM_004487,NM_018456	chr3,chr3	-,+	GOLGB1,EAF2	24582,109963
chr20:48097231-48098749	chr20	+	48097262	48098797	True	NM_004975,NR_003030	chr20,chr20	-,+	KCNB1,SNORD12	434,-200093
chr13:33859937-33861812	chr13	+	33860061	33861765	True	NM_004795,NM_178006	chr13,chr13	+,-	KL,STARD13	-269541,-160
chr11:113932916-113934110	chr11	+	113933190	113934138	True	NM_020886,NM_001018011,NM_006006	chr11,chr11,chr11	-,+,+	USP28,ZBTB16,ZBTB16	-186934,-1954,-2811
chr19:6460537-6461032	chr19	+	6460604	6460929	True	NM_139161,NM_174881,NM_024103	chr19,chr19,chr19	+,+,-	CRB3,CRB3,SLC25A23	3330,3330,-823
chr22:38573294-38573560	chr22	+	38573330	38573470	True	NM_003560,NM_001199562,NM_001161572,NM_001004426	chr22,chr22,chr22,chr22	-,-,+,-	PLA2G6,PLA2G6,MAFF,PLA2G6	4341,4416,24468,4341
chr12:49446846-49448431	chr12	+	49446873	49448286	True	NM_003482,NM_005430	chr12,chr12	-,+	MLL2,WNT1	871,-74695
chr10:13276668-13277064	chr10	+	13276724	13276838	True	NM_145314,NM_182751	chr10,chr10	-,+	UCMA,MCM10	-396,-73228
chrX:134866560-134866766	chrX	+	134866711	134866771	True	NM_152582,NM_001017436	chrX,chrX	+,+	CT45A2,CT45A4	-548,-548
chrX:134866560-134866766	chrX	+	134883985	134884045	False	NM_001017436,NM_001017435	chrX,chrX	-,+	CT45A4,CT45A3	52740,-548
chrX:134866560-134866766	chrX	-	134936177	134936237	False	NM_018666,NM_001017436	chrX,chrX	+,-	SAGE1,CT45A4	39547,548
chrX:134866560-134866766	chrX	-	134953436	134953496	False	NM_001007551,NM_018666,NM_001172288	chrX,chrX,chrX	-,+,-	CT45A5,SAGE1,CT45A5	548,22288,548
chrX:134866560-134866766	chrX	-	134970686	134970746	False	NM_001017438,NM_018666	chrX,chrX	-,+	CT45A6,SAGE1	548,5038
chr2:175115783-175116260	chr2	+	175116188	175116260	True	NM_013341,NM_001011708,NM_001145250	chr2,chr2,chr2	-,-,+	OLA1,OLA1,SP9	-2823,-2823,83560
chr6:41907543-41908748	chr6	+	41907574	41908592	True	NM_001760,NM_004053,NM_001136125	chr6,chr6,chr6	-,+,-	CCND3,BYSL,CCND3	1010,-18661,1010
chr11:46742685-46743861	chr11	+	46742889	46743754	True	NM_000506,NM_004308	chr11,chr11	+,-	F2,ARHGAP1	-2197,-20769
chr18:73142648-73144030	chr18	+	73142724	73143824	True	NM_005786,NM_001037331	chr18,chr18	+,-	TSHZ1,C18orf62	-220045,-3135
chr2:235863255-235864608	chr2	+	235863330	235864442	True	NM_014521,NM_005737	chr2,chr2	+,-	SH3BP4,ARL4C	-2753,-457637
chr19:51962014-51962868	chr19	+	51962023	51962756	True	NM_001080405,NM_014442	chr19,chr19	+,-	CEACAM18,SIGLEC8	17081,-315
chr16:70681228-70681523	chr16	+	70681250	70681539	True	NM_001172772,NM_138383	chr16,chr16	+,-	IL34,MTSS1L	-23406,38465
chr2:99224196-99224661	chr2	+	99224314	99224679	True	NM_001008215,NM_014044	chr2,chr2	-,+	C2orf64,UNC50	326,362
chr20:49545186-49547067	chr20	+	49545243	49546531	True	NM_181442,NM_015339,NM_014484	chr20,chr20,chr20	-,-,+	ADNP,ADNP,MOCS3	1046,1046,28831
chr12:111051218-111051618	chr12	+	111051442	111051516	True	NM_139283,NM_001082538,NM_001082537,NM_024549,NM_001173976,NM_001173975	chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,+,+,+	PPTC7,TCTN1,TCTN1,TCTN1,TCTN1,TCTN1	-30378,315,315,315,315,395
chr5:74999172-74999902	chr5	+	74999512	74999600	True	NM_152408,NM_016218	chr5,chr5	-,+	POC5,POLK	8746,-191916
chr13:41771968-41772420	chr13	+	41772039	41772455	True	NM_001110798,NM_032138	chr13,chr13	+,-	NAA16,KBTBD7	112885,-3337
chr18:6853630-6854615	chr18	+	6853806	6854573	True	NR_034100,NM_001010000	chr18,chr18	-,+	LOC400643,ARHGAP28	75356,-19426
chr20:31805481-31806870	chr20	+	31805615	31806676	True	NM_001042439,NM_178466,NM_016082	chr20,chr20,chr20	+,+,-	C20orf71,C20orf71,CDK5RAP1	-538,-538,182722
chr18:32074443-32075014	chr18	+	32074448	32075029	True	NM_001198945,NM_001392,NM_032979,NM_003787,NM_032975	chr18,chr18,chr18,chr18,chr18	+,+,+,-,+	DTNA,DTNA,DTNA,NOL4,DTNA	-1245,-1245,-1245,-270933,-1245
chr11:95621202-95622365	chr11	+	95621203	95622256	True	NM_014679,NM_016156	chr11,chr11	+,-	CEP57,MTMR2	-97625,35172
chr11:94822084-94822719	chr11	+	94822159	94822717	True	NM_015036,NM_016403	chr11,chr11	+,-	ENDOD1,CWC15	256,-115383
chr1:115264043-115265166	chr1	+	115264077	115265198	True	NM_003176,NM_002524	chr1,chr1	+,-	SYCP1,NRAS	132256,-4562
chr17:11145882-11146361	chr17	+	11145925	11146295	True	NM_001101387,NM_001173461,NM_001173462,NM_207386	chr17,chr17,chr17,chr17	-,+,+,+	PIRT,SHISA6,SHISA6,SHISA6	-404507,-1236,-1236,-1236
chr22:41260608-41262545	chr22	+	41260738	41262507	True	NM_001204827,NM_022098,NM_003932,NM_145174	chr22,chr22,chr22,chr22	+,+,-,-	XPNPEP3,XPNPEP3,ST13,DNAJB7	-7704,-7704,-8051,-2608
chr7:135345620-135346030	chr7	+	135345708	135346076	True	NM_001130929,NM_012450	chr7,chr7	+,-	PL-5283,SLC13A4	1144,66907
chr1:179197404-179198168	chr1	+	179197646	179198130	True	NM_001168238,NM_001168237,NM_001168236,NM_007314,NM_001136001,NM_003101	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,+	ABL2,ABL2,ABL2,ABL2,ABL2,SOAT1	739,739,739,739,739,64886
chr20:5100961-5101611	chr20	+	5100969	5101437	True	NM_001009923,NM_003818,NM_001009925,NM_001009924,NR_028370,NM_002592,NM_014145,NM_182649	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	-,+,-,-,+,-,-,-	C20orf30,CDS2,C20orf30,C20orf30,PCNA-AS1,PCNA,C20orf30,PCNA	-7236,6044,-7236,-7236,-788,5893,-7236,-322
chr3:17733030-17734781	chr3	+	17733350	17734576	True	NM_001134381,NR_037465	chr3,chr3	-,+	TBC1D5,MIR3714	6986,-758718
chr22:35570771-35572033	chr22	+	35570868	35572068	True	NM_001003681,NM_005368	chr22,chr22	+,-	HMGXB4,MB	81376,441366
chr1:68296514-68298007	chr1	+	68296823	68297900	True	NM_001924,NM_018841	chr1,chr1	+,-	GADD45A,GNG12	-146020,1305
chr12:115121704-115121970	chr12	+	115121712	115122008	True	NM_138432,NM_016569,NM_005996	chr12,chr12,chr12	+,-,-	SDSL,TBX3,TBX3	-1261547,11,11
chr3:184455800-184456039	chr3	+	184455878	184456058	True	NM_001009921,NM_022149	chr3,chr3	+,-	VPS8,MAGEF1	73872,-26042
chr17:8925909-8926247	chr17	+	8926014	8926260	True	NM_004822,NM_001142633	chr17,chr17	+,-	NTN1,PIK3R5	-1206,-56990
chr15:89440455-89440845	chr15	+	89440468	89440884	True	NM_178232,NM_013227	chr15,chr15	-,+	HAPLN3,ACAN	-1698,-93845
chr11:67070268-67070524	chr11	+	67070372	67070573	True	NM_021173,NM_017857	chr11,chr11	-,+	POLD4,SSH3	50529,345
chr14:104391677-104392891	chr14	+	104391719	104392721	True	NM_001127393,NM_153046,NM_004894	chr14,chr14,chr14	-,+,-	C14orf2,TDRD9,C14orf2	-3816,2095,-3816
chr22:38610503-38610786	chr22	+	38610531	38610705	True	NM_001161573,NM_001199562	chr22,chr22	+,-	MAFF,PLA2G6	-11555,-32695
chrX:47931511-47931804	chrX	+	47931515	47931799	True	NM_001190255,NM_001037735,NR_028366,NR_033730	chrX,chrX,chrX,chrX	-,-,+,-	ZNF630,ZNF630,SSX6,ZNF630	-514,-1007,35567,-490
chr2:19559381-19560962	chr2	+	19559540	19560837	True	NM_145260,NR_033875	chr2,chr2	-,+	OSR1,FLJ12334	-1168,507777
chr9:115142039-115142295	chr9	+	115142086	115142316	True	NM_032303,NR_036085,NM_001195822,NR_036651	chr9,chr9,chr9,chr9	+,-,+,+	HSDL2,MIR3134,HSDL2,HSDL2	24,-29541,24,24
chr12:100560556-100562217	chr12	+	100560568	100562154	True	NR_036632,NR_024261,NR_031728	chr12,chr12,chr12	-,-,+	GOLGA2B,GOLGA2B,MIR1827	5017,5017,21507
chr6:26155209-26156384	chr6	+	26155229	26156318	True	NM_138720,NM_003526,NM_005321,NM_021063	chr6,chr6,chr6,chr6	+,-,+,+	HIST1H2BD,HIST1H2BC,HIST1H1E,HIST1H2BD	2030,-31097,240,2030
chr21:35290402-35291409	chr21	+	35290429	35291458	True	NM_032476,NM_001697	chr21,chr21	+,-	MRPS6,ATP5O	154364,-2271
chr11:61893961-61894799	chr11	+	61893976	61894850	True	NM_001040694,NM_002032,NM_020238	chr11,chr11,chr11	+,-,+	INCENP,FTH1,INCENP	-2583,-158844,-2583
chr18:12423406-12423764	chr18	+	12423464	12423780	True	NM_006796,NM_006553	chr18,chr18	-,+	AFG3L2,SLMO1	-46189,-15620
chr19:53496068-53496344	chr19	+	53496288	53496348	True	NM_152473,NR_003578	chr19,chr19	+,-	HERV-V1,ZNF702P	20995,486
chrX:12154654-12155637	chrX	+	12154725	12155505	True	NM_006125,NM_014728	chrX,chrX	-,+	ARHGAP6,FRMPD4	-470904,1079
chr10:104674238-104675348	chr10	+	104674427	104675007	True	NM_199077,NM_017649,NM_000102,NM_199076	chr10,chr10,chr10,chr10	+,+,-,+	CNNM2,CNNM2,CYP17A1,CNNM2	3106,3106,-77137,3106
chr20:55924692-55925867	chr20	+	55924789	55925721	True	NM_001190472,NM_001015885,NM_003610	chr20,chr20,chr20	-,+,+	MTRNR2L3,RAE1,RAE1	9207,896,423
chr2:25194738-25194948	chr2	+	25194805	25194901	True	NM_016544,NM_001198559,NR_034113	chr2,chr2,chr2	-,-,+	DNAJC27,DNAJC27,LOC729723	112,112,79
chr17:4889012-4889546	chr17	+	4889053	4889523	True	NM_006612,NM_001171168,NM_001171167,NM_001171166,NM_015099	chr17,chr17,chr17,chr17,chr17	+,-,-,-,-	KIF1C,CAMTA2,CAMTA2,CAMTA2,CAMTA2	11719,1192,1192,1487,1487
chr13:20196141-20196500	chr13	+	20196286	20196524	True	NM_199254,NM_017520	chr13,chr13	-,+	TPTE2,MPHOSPH8	-85383,11263
chr17:7452607-7453288	chr17	+	7452732	7453218	True	NM_172087,NM_003808,NM_003809,NM_172089,NM_172088,NM_006942,NM_001198624,NM_001198623,NM_001198622,NR_037146	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,-,+,+,+,+	TNFSF13,TNFSF13,TNFSF12,TNFSF12-TNFSF13,TNFSF13,SOX15,TNFSF13,TNFSF13,TNFSF13,TNFSF12	8390,8390,-408,-408,8390,40320,8390,8390,8390,-408
chrX:152223186-152224098	chrX	+	152223336	152224126	True	NM_032882,NM_013364	chrX,chrX	-,+	PNMA6A,PNMA3	21882,639
chr12:95628224-95628972	chr12	+	95628354	95628419	True	NM_017599,NM_018351	chr12,chr12	+,-	VEZT,FGD6	-16884,-17114
chr7:64361771-64362182	chr7	+	64361835	64362012	True	NR_002789,NR_003099,NM_021148	chr7,chr7,chr7	-,+,+	LOC168474,ZNF273,ZNF273	-47657,1607,1607
chr2:120317465-120317721	chr2	+	120317531	120317609	True	NM_001029996,NM_002980	chr2,chr2	+,-	PCDP1,SCTR	-15558,-35503
chr16:79633690-79633899	chr16	+	79633689	79633803	True	NM_005360,NM_130897,NM_001031804	chr16,chr16,chr16	-,+,-	MAF,DYNLRB2,MAF	869,941050,869
chr14:45603183-45603419	chr14	+	45603195	45603449	True	NM_002013,NM_020937	chr14,chr14	-,+	FKBP3,FANCM	333,1686
chr13:31487897-31489607	chr13	+	31488294	31489636	True	NM_006644,NM_032849	chr13,chr13	-,+	HSPH1,C13orf33	246531,-8042
chr9:136085588-136085849	chr9	+	136085684	136085763	True	NM_014581,NR_001275	chr9,chr9	-,+	OBP2B,CELP	-1056,-127816
chr17:62941678-62942422	chr17	+	62942261	62942454	True	NM_199340,NM_001165933	chr17,chr17	-,+	LRRC37A3,RGS9	-27358,191001
chr8:11189648-11191528	chr8	+	11190011	11191316	True	NM_054028,NM_173683,NR_001578	chr8,chr8,chr8	+,-,+	AMAC1L2,XKR6,TDH	-1575,-131136,5829
chr19:6502788-6503264	chr19	+	6502823	6502901	True	NM_003811,NM_006087	chr19,chr19	+,-	TNFSF9,TUBB4	28108,-493
chr3:27765018-27765346	chr3	+	27765035	27765387	True	NM_005442,NM_182523	chr3,chr3	-,+	EOMES,CMC1	-1250,517736
chr2:32580152-32580400	chr2	+	32580207	32580389	True	NM_021209,NM_016252	chr2,chr2	-,+	NLRC4,BIRC6	-89395,1706
chr12:128057560-128059270	chr12	+	128057576	128059281	True	NR_033970,NR_033987	chr12,chr12	-,+	LOC440117,FLJ37505	-698340,306880
chr17:6940583-6940967	chr17	+	6940674	6940763	True	NM_153357,NM_201566	chr17,chr17	-,+	SLC16A11,SLC16A13	6532,-1331
chr13:43564022-43565123	chr13	+	43564101	43565161	True	NM_001002264,NM_013238,NM_033255	chr13,chr13,chr13	-,+,-	EPSTI1,DNAJC15,EPSTI1	1266,32200,1266
chr10:88987333-88987828	chr10	+	88987408	88987804	True	NM_001099338,NR_024397	chr10,chr10	+,-	FAM22A,LOC728190	-2254,114561
chr10:88987333-88987828	chr10	+	52438321	52438371	False	NM_147156,NM_001079516	chr10,chr10	-,+	SGMS1,ASAH2B	-54584,61336
chr10:88987333-88987828	chr10	+	89119964	89120022	False	NM_001009610,NR_024397	chr10,chr10	+,-	FAM22D,LOC728190	-2538,-17649
chr10:88987333-88987828	chr10	+	81465186	81465236	False	NR_027512,NM_001098668	chr10,chr10	+,-	LOC650623,SFTPA2	-22506,-145023
chr10:88987333-88987828	chr10	+	81603317	81603367	False	NR_029407,NM_003019	chr10,chr10	+,-	LOC642361,SFTPD	-17710,105544
chr10:112256870-112257089	chr10	+	112256910	112257107	True	NM_005871,NM_004419	chr10,chr10	-,+	SMNDC1,DUSP5	-192203,517
chr16:56671860-56672133	chr16	+	56671941	56672135	True	NR_003658,NR_036677,NM_176870,NM_005946,NM_005950,NR_027781	chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,-,+	MT1DP,MT1JP,MT1M,MT1A,MT1G,MT1DP	5580,-2341,-5458,442,29892,5463
chr5:176837391-176838479	chr5	+	176837670	176838370	True	NM_000505,NM_001004105	chr5,chr5	-,+	F12,GRK6	-1093,15316
chr19:3482045-3482626	chr19	+	3482122	3482586	True	NM_016263,NM_001136503	chr19,chr19	+,-	FZR1,C19orf77	23708,-1582
chr2:18773490-18774204	chr2	+	18773511	18774099	True	NM_033253,NM_002252,NM_001199088,NM_001002006,NM_001199086,NM_001199087,NM_001199104,NM_001199103	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	-,+,-,-,-,-,-,-	NT5C1B,KCNS3,NT5C1B,NT5C1B,NT5C1B,NT5C1B,NT5C1B-RDH14,NT5C1B-RDH14	-2665,-713617,-2665,-2665,-2665,-2665,-2665,-2665
chr19:58257569-58258167	chr19	+	58257739	58258197	True	NM_173632,NM_024833	chr19,chr19	+,-	ZNF776,ZNF671	34,-18744
chr4:76553592-76554843	chr4	+	76553664	76554738	True	NM_003948,NM_178497	chr4,chr4	-,+	CDKL2,C4orf26	1036,-72466
chr7:86301968-86302731	chr7	+	86301998	86302771	True	NM_152748,NM_000840	chr7,chr7	-,+	KIAA1324L,GRM3	292572,-28819
chr12:49259402-49259663	chr12	+	49259425	49259635	True	NM_014470,NM_033124	chr12,chr12	-,+	RND1,CCDC65	68,38257
chr17:80171417-80171771	chr17	+	80171430	80171746	True	NM_001042422,NM_198082	chr17,chr17	+,-	SLC16A3,CCDC57	14546,-741
chr4:140057538-140058171	chr4	+	140057582	140058172	True	NM_201999,NM_012118	chr4,chr4	-,+	ELF2,CCRN4L	2485,-120694
chr5:145330196-145331367	chr5	+	145330267	145331405	True	NM_152550,NM_001080516	chr5,chr5	+,-	SH3RF2,GRXCR2	-14199,-77736
chr11:47291979-47293165	chr11	+	47292161	47293222	True	NM_130472,NM_130473,NM_130470,NM_130471,NM_130476,NM_130474,NM_130475,NM_003682,NM_001131064,NM_001135943,NM_001135944	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,+,+,+,-,+,+	MADD,MADD,MADD,MADD,MADD,MADD,MADD,MADD,ACP2,MADD,MADD	-1019,-1019,-1291,-1019,-547,-1019,-547,-1019,-21704,-547,-1019
chr10:120924404-120924895	chr10	+	120924568	120924936	True	NM_005308,NM_213649	chr10,chr10	+,-	GRK5,SFXN4	42260,318
chr22:20748933-20749141	chr22	+	20748941	20749033	True	NM_153334,NR_003253,NM_003426	chr22,chr22,chr22	-,+,+	SCARF2,ZNF74,ZNF74	43163,-512,-512
chr9:99798510-99798966	chr9	+	99798641	99798975	True	NM_001333,NM_001045477,NM_001201575	chr9,chr9,chr9	-,+,-	CTSL2,FAM22G,CTSL2	2667,-107415,3000
chr10:48862321-48862521	chr10	+	48862380	48862506	True	NR_033172,NM_153034	chr10,chr10	-,+	FRMPD2P1,ZNF488	232,-507342
chr10:48862321-48862521	chr10	+	46675480	46675606	False	NR_027632,NM_015605	chr10,chr10	+,-	FAM35B,PTPN20B	222034,-34477
chr10:48862321-48862521	chr10	+	49382932	49383058	False	NR_033178,NR_033172,NM_002750	chr10,chr10,chr10	-,-,+	FRMPD2,FRMPD2P1,MAPK8	232,232,226628
chr4:78737881-78739768	chr4	+	78737880	78739743	True	NM_020236,NM_144571	chr4,chr4	+,-	MRPL1,CNOT6L	44061,851
chr22:39378729-39380033	chr22	+	39378786	39379646	True	NM_014292,NM_004900	chr22,chr22	-,+	CBX6,APOBEC3B	-110528,-432
chr12:131327002-131327321	chr12	+	131327160	131327235	True	NM_194356,NM_001980,NM_006325	chr12,chr12,chr12	-,-,+	STX2,STX2,RAN	-3349,-3349,29381
chr12:56523938-56524640	chr12	+	56524004	56524652	True	NM_015292,NM_001130420,NM_001184796	chr12,chr12,chr12	+,-,+	ESYT1,SMARCC2,ESYT1	-2069,58749,-2069
chr3:14860953-14861206	chr3	+	14860958	14861124	True	NM_152536,NM_022497	chr3,chr3	+,-	FGD5,MRPS25	-540,245742
chr10:29921882-29922469	chr10	+	29922344	29922514	True	NM_021738,NR_003930	chr10,chr10	-,+	SVIL,LOC387647	1437,-223901
chr1:48450171-48450879	chr1	+	48450230	48450868	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	11744,237488
chr16:56642592-56642830	chr16	+	56642656	56642826	True	NR_001447,NM_005953,NM_005950	chr16,chr16,chr16	+,+,-	MT1L,MT2A,MT1G	8546,-229,59201
chr22:35870990-35871385	chr22	+	35870993	35871421	True	NM_005368,NM_014310	chr22,chr22	-,+	MB,RASD2	142013,65930
chr1:16765019-16766001	chr1	+	16765261	16765589	True	NM_018090,NM_198546,NM_001145277,NM_001145278	chr1,chr1,chr1,chr1	+,-,+,+	NECAP2,SPATA21,NECAP2,NECAP2	1577,-1342,1577,1577
chr16:74454094-74454355	chr16	+	74454102	74454344	True	NM_001011880,NM_002811	chr16,chr16	-,+	CLEC18B,PSMD7	1074,-123480
chr16:74454094-74454355	chr16	-	69986083	69986301	False	NM_001136214,NR_003610,NM_182619	chr16,chr16,chr16	+,-,+	CLEC18A,PDXDC2P,CLEC18A	-1508,113600,-1324
chr16:74454094-74454355	chr16	-	70208995	70209237	False	NR_033959,NM_173619	chr16,chr16	-,+	LOC729513,CLEC18C	50749,-1118
chr19:14377843-14378213	chr19	+	14377850	14378072	True	NM_014921,NM_001025160	chr19,chr19	-,+	LPHN1,CD97	-60853,114140
chr13:48614060-48614729	chr13	+	48614072	48614539	True	NM_003850,NM_018283	chr13,chr13	-,+	SUCLA2,NUDT15	-38610,-2420
chr9:136934811-136935067	chr9	+	136934893	136935057	True	NM_007371,NR_015427	chr9,chr9	-,+	BRD3,NCRNA00094	-1752,-44383
chr11:32851091-32851321	chr11	+	32851091	32851273	True	NM_001008391,NM_024081	chr11,chr11	-,+	CCDC73,PRRG4	-34904,215
chr6:33559490-33559707	chr6	+	33559577	33559703	True	NR_027908,NR_028361	chr6,chr6	-,+	C6orf227,GGNBP1	1462,-8152
chr3:130066118-130066555	chr3	+	130066287	130066489	True	NM_153264,NR_024252,NR_022012	chr3,chr3,chr3	+,-,+	COL6A5,LOC729375,COL6A5	-1990,-236011,-1990
chr8:144242446-144243257	chr8	+	144242471	144243198	True	NM_178172,NM_001135655,NM_002347,NM_001130478	chr8,chr8,chr8,chr8	+,-,-,-	GPIHBP1,LY6H,LY6H,LY6H	51869,-716,-1014,-418
chr10:102087521-102088839	chr10	+	102087602	102088875	True	NM_016112,NM_005063	chr10,chr10	-,+	PKD2L1,SCD	1418,17896
chr7:128096874-128097685	chr7	+	128097041	128097665	True	NM_183243,NM_001098786,NM_013332	chr7,chr7,chr7	-,+,+	IMPDH1,C7orf68,C7orf68	-47005,-1208,-1208
chr22:24890174-24890423	chr22	+	24890176	24890366	True	NR_028483,NR_028484,NM_016327	chr22,chr22,chr22	-,-,+	C22orf45,C22orf45,UPB1	467,467,884
chr12:49369951-49370544	chr12	+	49369950	49370295	True	NM_003394,NM_005430	chr12,chr12	-,+	WNT10B,WNT1	-4309,1940
chr12:55023803-55025461	chr12	+	55024085	55025365	True	NM_001165975,NM_033277	chr12,chr12	+,-	PDE1B,LACRT	-69044,3350
chr11:6520661-6520888	chr11	+	6520660	6520750	True	NM_173589,NM_144666,NM_012402	chr11,chr11,chr11	+,+,-	DNHD1,DNHD1,ARFIP2	-2185,-2185,-18065
chr5:173161364-173161994	chr5	+	173161475	173161991	True	NM_030627,NM_138369	chr5,chr5	+,-	CPEB4,BOD1	153339,-117809
chr4:46978955-46980424	chr4	+	46979065	46980401	True	NM_000812,NM_001204266	chr4,chr4	+,-	GABRB1,GABRA4	52893,15180
chr19:41700943-41701175	chr19	+	41701029	41701175	True	NM_030622,NM_000660	chr19,chr19	+,-	CYP2S1,TGFB1	-1966,158706
chr2:153030001-153031555	chr2	+	153030420	153031555	True	NM_052905,NM_005843	chr2,chr2	+,-	FMNL2,STAM2	160195,1001
chr14:24900074-24900865	chr14	+	24900317	24900877	True	NM_001039771,NM_015299	chr14,chr14	-,+	CBLN3,KHNYN	-1586,-1234
chr5:135169397-135170206	chr5	+	135169458	135170242	True	NM_145282,NM_000590	chr5,chr5	+,-	SLC25A48,IL9	122,61324
chr18:56296542-56298103	chr18	+	56296562	56297679	True	NM_006785,NM_052947	chr18,chr18	+,-	MALT1,ALPK2	40938,-373
chr2:25392583-25393667	chr2	+	25392630	25393527	True	NM_001035256,NM_000939,NM_014971	chr2,chr2,chr2	-,-,+	POMC,POMC,EFR3B	-1071,-1071,-127708
chr11:73584858-73585841	chr11	+	73584915	73585756	True	NM_025155,NM_016565	chr11,chr11	+,-	PAAF1,CHCHD8	2276,2189
chr16:56648330-56649764	chr16	+	56648564	56649666	True	NR_001447,NM_175617,NM_005953,NM_005950	chr16,chr16,chr16,chr16	+,+,+,-	MT1L,MT1E,MT2A,MT1G	1706,9918,-6140,52361
chr19:41083339-41083662	chr19	+	41083502	41083666	True	NM_000713,NM_138392	chr19,chr19	-,+	BLVRB,SHKBP1	-111777,-796
chr9:131129901-131130183	chr9	+	131129987	131130100	True	NR_029837,NM_030914,NM_001135947	chr9,chr9,chr9	-,+,+	MIR219-2,URM1,URM1	24943,3497,3497
chr12:128061603-128062033	chr12	+	128061643	128062065	True	NR_033970,NR_033987	chr12,chr12	-,+	LOC440117,FLJ37505	-702407,304096
chr16:1382803-1383054	chr16	+	1382841	1383012	True	NM_003933,NM_001001410,NM_001199099,NM_001199098,NM_001199097,NM_001199096	chr16,chr16,chr16,chr16,chr16,chr16	+,-,+,+,+,+	BAIAP3,C16orf42,BAIAP3,BAIAP3,BAIAP3,BAIAP3	1492,18911,593,593,593,3185
chr7:95410337-95412016	chr7	+	95410468	95411974	True	NM_001135556,NM_001135557,NM_002612,NM_004411	chr7,chr7,chr7,chr7	+,+,-,+	DYNC1I1,DYNC1I1,PDK4,DYNC1I1	-8707,-8707,-184543,-8707
chr5:147778603-147779034	chr5	+	147778617	147779050	True	NM_205836,NM_001040169	chr5,chr5	+,-	FBXO38,HTR4	-15122,237625
chr10:112258800-112259004	chr10	+	112258819	112259037	True	NM_005871,NM_004419	chr10,chr10	-,+	SMNDC1,DUSP5	-194112,-1245
chr6:52282065-52282984	chr6	+	52282265	52282844	True	NM_018100,NM_001172420,NM_002388,NR_033327	chr6,chr6,chr6,chr6	+,+,-,+	EFHC1,EFHC1,MCM3,EFHC1	2149,2960,-132683,2149
chr11:31538332-31539458	chr11	+	31538332	31539051	True	NM_144981,NM_019040	chr11,chr11	-,+	IMMP1L,ELP4	-7163,-7098
chr1:155161932-155162624	chr1	+	155161944	155162518	True	NM_001204287,NM_001204286,NM_001204285,NM_001204297,NM_001204290,NM_001204291,NM_001204292,NM_001204293,NM_002456,NM_001204296,NM_001204289,NM_001204288,NM_001044393,NM_001044392,NM_001044391,NM_001044390,NR_030281,NM_001018017,NM_001018016,NM_001204295,NM_001204294	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,+,-,-,-,-	MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MIR92B,MUC1,MUC1,MUC1,MUC1	238,238,238,238,238,238,238,238,238,238,238,238,238,238,238,238,2449,238,238,238,238
chr6:1608848-1609060	chr6	+	1608858	1608968	True	NM_001453,NR_027116	chr6,chr6	+,-	FOXC1,LOC285768	1712,-507291
chr14:20686624-20687652	chr14	+	20686695	20687686	True	NM_001004480,NM_138376	chr14,chr14	+,-	OR11H6,TTC5	4182,86517
chr1:248021596-248022153	chr1	+	248021661	248021992	True	NM_015431,NM_001001959	chr1,chr1	+,-	TRIM58,OR11L1	-1217,-16463
chr1:175159926-175161015	chr1	+	175159988	175161002	True	NM_001162893,NM_022093,NM_014656,NM_001162895,NM_001162894	chr1,chr1,chr1,chr1,chr1	-,+,-,-,-	KIAA0040,TNN,KIAA0040,KIAA0040,KIAA0040	1277,-123046,997,997,1277
chr7:23640082-23641461	chr7	+	23640111	23641224	True	NM_138771,NR_002711	chr7,chr7	+,-	CCDC126,CLK2P	-3166,-13965
chr15:50977577-50978440	chr15	+	50977750	50978341	True	NM_017672,NM_007347	chr15,chr15	-,+	TRPM7,AP4E1	722,222604
chr21:33032645-33032869	chr21	+	33032644	33032855	True	NM_000454,NM_001145444	chr21,chr21	+,-	SOD1,SCAF4	-760,71626
chr19:17378260-17379329	chr19	+	17378259	17379143	True	NM_001033549,NM_031941,NM_014173	chr19,chr19,chr19	+,-,+	BABAM1,USHBP1,BABAM1	-78,-2715,-78
chr16:29828030-29828247	chr16	+	29828075	29828295	True	NM_006319,NM_024516,NM_017458,NM_145239,NM_005115	chr16,chr16,chr16,chr16,chr16	-,+,+,+,+	CDIPT,C16orf53,MVP,PRRT2,MVP	46333,-598,3419,-4717,3419
chr1:212962847-212963446	chr1	+	212962888	212963366	True	NM_001042553,NM_001042552,NM_001146170,NM_001146171,NM_001146169,NM_001042549,NM_015471	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-,-	TATDN3,TATDN3,TATDN3,TATDN3,TATDN3,NSL1,NSL1	1803,1803,1803,1803,1803,1829,1829
chr2:205405638-205406177	chr2	+	205405967	205406199	True	NM_057177,NM_203365,NM_152526,NM_205863	chr2,chr2,chr2,chr2	+,-,+,+	PARD3B,RAPH1,PARD3B,PARD3B	4316,-1005909,4316,4316
chr19:41081604-41082299	chr19	+	41082007	41082083	True	NM_000713,NM_138392	chr19,chr19	-,+	BLVRB,SHKBP1	-110282,673
chr1:31230189-31230486	chr1	+	31230213	31230475	True	NM_006762,NR_034182	chr1,chr1	-,+	LAPTM5,LOC100129196	258,-38645
chr4:39145696-39146323	chr4	+	39145695	39145942	True	NM_025132,NM_024943	chr4,chr4	+,-	WDR19,TMEM156	38081,-111654
chr5:168726623-168726856	chr5	+	168726780	168726849	True	NM_017785,NM_003062	chr5,chr5	+,-	CCDC99,SLIT3	283788,1335
chr17:34059386-34060617	chr17	+	34059475	34060603	True	NM_033315,NM_139285	chr17,chr17	+,-	RASL10B,GAS2L2	-847,19344
chr2:23639965-23641501	chr2	+	23640145	23641401	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	508583,-31898
chr1:145473859-145474123	chr1	+	145473862	145473990	True	NM_153713,NM_032305,NM_001039888	chr1,chr1,chr1	+,-,+	LIX1L,POLR3GL,ANKRD34A	3094,-3475,-3405
chr10:90557881-90558529	chr10	+	90558079	90558534	True	NM_144590,NM_001128215	chr10,chr10	-,+	ANKRD22,LIPM	53255,3952
chr1:43253245-43254752	chr1	+	43253301	43254404	True	NM_024097,NM_022356	chr1,chr1	+,-	C1orf50,LEPRE1	-20436,-20546
chr1:224516646-224517567	chr1	+	224517085	224517521	True	NM_002533,NM_206840,NM_014184	chr1,chr1,chr1	-,-,+	NVL,NVL,CNIH4	401,401,27073
chr11:89957581-89958610	chr11	+	89957584	89958146	True	NM_012124,NM_005467,NM_001144073	chr11,chr11,chr11	-,+,-	CHORDC1,NAALAD2,CHORDC1	-1052,-89830,-1052
chr16:2865449-2866899	chr16	+	2865716	2866870	True	NR_026864,NM_144956,NM_006799,NM_144957	chr16,chr16,chr16,chr16	-,+,+,+	PRSS30P,PRSS21,PRSS21,PRSS21	25932,293,293,293
chr17:38804764-38805747	chr17	+	38804998	38805475	True	NM_001195387,NM_003079	chr17,chr17	+,-	TMEM99,SMARCE1	169868,-895
chr1:16839277-16839953	chr1	+	16839869	16839965	True	NR_023386,NR_037446	chr1,chr1	-,+	CROCCP3,MIR3675	-20673,35443
chr5:68630522-68630837	chr5	+	68630668	68630886	True	NM_176816,NM_133343	chr5,chr5	-,+	CCDC125,RAD17	-14258,34237
chr7:93198868-93199151	chr7	+	93198876	93199182	True	NM_001164737,NM_001164738,NM_001742,NM_021955	chr7,chr7,chr7,chr7	-,-,-,+	CALCR,CALCR,CALCR,GNGT1	4910,-9754,4910,336637
chr6:43423851-43424377	chr6	+	43423904	43424176	True	NM_023932,NM_206539,NM_001146016	chr6,chr6,chr6	-,-,+	DLK2,DLK2,TJAP1	-618,-118,21084
chr6:24491790-24493626	chr6	+	24491936	24493282	True	NM_170740,NM_001503,NM_001080,NM_177483	chr6,chr6,chr6,chr6	+,-,+,-	ALDH5A1,GPLD1,ALDH5A1,GPLD1	1914,-2086,1914,-2137
chrX:119736760-119737171	chrX	+	119736983	119737052	True	NM_014060,NM_001137554,NM_001011551	chrX,chrX,chrX	+,+,-	MCTS1,MCTS1,C1GALT1C1	691,1499,27004
chr19:52302490-52303115	chr19	+	52302501	52303143	True	NM_002029,NM_002030	chr19,chr19	-,+	FPR1,FPR3	-47351,-4141
chr4:159943903-159944529	chr4	+	159944348	159944578	True	NM_152543,NM_014247	chr4,chr4	-,+	C4orf45,RAPGEF2	11805,244419
chr1:40252446-40252903	chr1	+	40252644	40252876	True	NM_001720,NM_001195007	chr1,chr1	-,+	BMP8B,PPIE	1707,-48178
chr1:40252446-40252903	chr1	-	39958945	39958995	False	NR_003929,NM_181809	chr1,chr1	-,+	PPIEL,BMP8A	66425,-1678
chr12:77272277-77272581	chr12	+	77272340	77272428	True	NM_001321,NM_015336	chr12,chr12	-,+	CSRP2,ZDHHC17	421,-114537
chr8:93050400-93050828	chr8	+	93050474	93050826	True	NM_175636,NM_052832	chr8,chr8	-,+	RUNX1T1,SLC26A7	-20566,-789009
chr6:166401868-166402087	chr6	+	166401868	166402108	True	NR_026860,NR_026861,NR_027284	chr6,chr6,chr6	-,-,+	C6orf176,C6orf176,LOC441177	-341,-341,-880
chr15:73658018-73659299	chr15	+	73658088	73659195	True	NM_001042367,NM_005477	chr15,chr15	+,-	C15orf60,HCN4	76303,2460
chr2:30671875-30672457	chr2	+	30671879	30672287	True	NM_182551,NM_001002257,NM_144575	chr2,chr2,chr2	+,+,-	LCLAT1,LCLAT1,CAPN13	-1807,-1793,358082
chr7:54828614-54829201	chr7	+	54828711	54829143	True	NM_182546,NM_001012456,NM_014302	chr7,chr7,chr7	+,-,-	VSTM2A,SEC61G,SEC61G	-218754,-1772,-1772
chr14:104316266-104316593	chr14	+	104316319	104316532	True	NM_153046,NM_015316	chr14,chr14	+,-	TDRD9,PPP1R13B	78284,-2392
chr17:74499108-74499841	chr17	+	74499203	74499423	True	NR_033357,NM_024599	chr17,chr17	+,-	PRCD,RHBDF2	24244,-1694
chr19:50168143-50168868	chr19	+	50168260	50168900	True	NM_001040668,NM_001197128,NM_001571,NM_001197126,NM_001197127,NM_138639,NM_001197125,NM_001197124,NM_001197123,NM_001197122	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,-,-,-,+,-,-,-,-	BCL2L12,IRF3,IRF3,IRF3,IRF3,BCL2L12,IRF3,IRF3,IRF3,IRF3	-81,282,282,282,282,-81,282,282,282,282
chr3:15367448-15368680	chr3	+	15367590	15368545	True	NM_033083,NM_004844	chr3,chr3	+,-	EAF1,SH3BP5	100518,5610
chr14:24835538-24835849	chr14	+	24835620	24835750	True	NM_001198966,NM_001136022,NM_001198965,NM_006871,NM_004554,NM_001198967	chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,-,+,+	NFATC4,NFATC4,NFATC4,RIPK3,NFATC4,NFATC4	2551,394,1475,-26378,1475,394
chr19:19651051-19651342	chr19	+	19651053	19651295	True	NM_032037,NM_153221	chr19,chr19	-,+	TSSK6,CILP2	-24584,-2030
chr22:22019886-22020276	chr22	+	22020032	22020276	True	NM_148175,NM_148176,NM_014337,NM_001017964	chr22,chr22,chr22,chr22	+,+,+,-	PPIL2,PPIL2,PPIL2,YDJC	-4,-4,-4,-35692
chr2:203241144-203241409	chr2	+	203241336	203241398	True	NM_003352,NM_001204	chr2,chr2	-,+	SUMO1,BMPR2	-138014,-337
chr22:41034272-41034506	chr22	+	41034275	41034529	True	NM_020831,NM_005297	chr22,chr22	-,+	MKL1,MCHR1	-1585,40652
chr1:39334919-39335696	chr1	+	39335050	39335330	True	NR_037632,NM_001136275,NM_012333,NM_022157	chr1,chr1,chr1,chr1	-,+,-,-	MYCBP,AKIRIN1,MYCBP,RRAGC	3778,121585,3778,-9710
chr12:12715949-12716727	chr12	+	12716087	12716765	True	NM_001310,NM_030640	chr12,chr12	+,-	CREBL2,DUSP16	48065,-639
chr5:138841301-138843248	chr5	+	138841479	138842635	True	NM_003339,NM_001077693	chr5,chr5	+,-	UBE2D2,ECSCR	98115,201
chr2:228195540-228196778	chr2	+	228195542	228196449	True	NM_020194,NM_024795	chr2,chr2	+,-	MFF,TM4SF20	-3370,47623
chr13:113622257-113622544	chr13	+	113622296	113622408	True	NR_034002,NM_001112732	chr13,chr13	-,+	MCF2L-AS1,MCF2L	594,348
chr1:247173069-247174652	chr1	+	247173429	247174658	True	NR_015422,NM_001204221,NR_037892,NM_020394	chr1,chr1,chr1,chr1	+,-,-,-	LOC149134,ZNF695,ZNF695,ZNF695	-220569,-2034,-2034,-2034
chr19:3522911-3523899	chr19	+	3522991	3523723	True	NM_001136197,NM_001145165,NM_001136198	chr19,chr19,chr19	+,-,+	FZR1,DOHH,FZR1	-88,-22053,-88
chr11:76495782-76495989	chr11	+	76495822	76495940	True	NM_015516,NR_024042	chr11,chr11	+,-	TSKU,GUCY2E	-1588,-62989
chr16:75466152-75466937	chr16	+	75466475	75466791	True	NM_006324,NM_007285	chr16,chr16	-,+	CFDP1,GABARAPL2	646,133457
chr14:91575268-91577073	chr14	+	91575540	91576752	True	NM_001102369,NM_001102368,NM_001102367,NM_001102366,NM_024952,NM_182398	chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,+,+,-	C14orf159,C14orf159,C14orf159,C14orf159,C14orf159,RPS6KA5	3604,3604,4226,3604,3604,-48547
chr19:35743030-35743806	chr19	+	35743038	35743623	True	NM_205835,NM_015925,NM_152481,NM_205834	chr19,chr19,chr19,chr19	+,+,-,+	LSR,LSR,FAM187B,LSR	-3530,-3530,-23410,-3530
chr17:15457710-15459321	chr17	+	15458174	15459082	True	NM_145301,NM_001135036,NR_037924,NM_001204478,NM_001130842	chr17,chr17,chr17,chr17,chr17	-,-,-,-,+	FAM18B2,FAM18B2,FAM18B2-CDRT4,FAM18B2-CDRT4,ZNF286A	7913,7913,7913,7913,143808
chr17:15457710-15459321	chr17	-	18692260	18692849	False	NM_016078,NM_001145045	chr17,chr17	+,-	FAM18B1,ZNF286B	-7729,-106688
chr12:64199542-64201503	chr12	+	64199626	64201312	True	NM_014254,NM_173812	chr12,chr12	+,-	TMEM5,DPY19L2	-26042,-137272
chr5:140090636-140090857	chr5	+	140090653	140090905	True	NR_026704,NM_002109,NR_026703	chr5,chr5,chr5	+,-,+	VTRNA1-2,HARS,VTRNA1-1	7605,-19682,-19
chr11:102325735-102326537	chr11	+	102325802	102326560	True	NM_001166,NM_052932	chr11,chr11	+,-	BIRC2,TMEM123	-107887,-2027
chr15:76134936-76135206	chr15	+	76134936	76135224	True	NM_001145335,NM_173469,NR_036198	chr15,chr15,chr15	+,+,-	UBE2Q2,UBE2Q2,MIR4313	1160,397,-80280
chr4:25528495-25529672	chr4	+	25528631	25529657	True	NM_015187,NM_001177998	chr4,chr4	-,+	SEL1L3,SLC34A2	335009,127777
chr1:115120078-115120533	chr1	+	115120277	115120511	True	NM_003176,NM_005872	chr1,chr1	+,-	SYCP1,BCAS2	276943,3814
chrY:15590377-15590902	chrY	+	15590443	15590935	True	NM_007125,NM_182659,NM_182660,NM_004202	chrY,chrY,chrY,chrY	-,-,-,+	UTY,UTY,UTY,TMSB4Y	1665,1665,1665,224511
chr17:38574938-38575237	chr17	+	38575091	38575225	True	NM_001552,NM_001067	chr17,chr17	+,-	IGFBP4,TOP2A	24450,-889
chr9:125279599-125281565	chr9	+	125279631	125281340	True	NM_012363,NM_054107,NM_001004452	chr9,chr9,chr9	-,+,+	OR1N1,OR1J2,OR1J4	8296,-6602,79
chr14:50051404-50051749	chr14	+	50051537	50051756	True	NM_001030001,NR_037792,NM_001032	chr14,chr14,chr14	-,+,-	RPS29,LRR1,RPS29	1389,13658,1389
chr12:322647-323101	chr12	+	322797	322965	True	NM_001122848,NM_015232,NM_003044,NM_001122847	chr12,chr12,chr12,chr12	-,+,-,-	SLC6A12,IQSEC3,SLC6A12,SLC6A12	456,-136306,-305,1
chr8:145437212-145437523	chr8	+	145437216	145437318	True	NM_016458,NM_015201	chr8,chr8	+,-	FAM203A,BOP1	561,77852
chr8:145437212-145437523	chr8	+	145192008	145192110	False	NM_030974,NM_016458	chr8,chr8	-,+	SHARPIN,FAM203A	-32868,561
chr1:11253421-11253713	chr1	+	11253491	11253749	True	NM_021146,NM_004958	chr1,chr1	+,-	ANGPTL7,MTOR	-4144,68909
chr16:29912732-29913031	chr16	+	29912738	29913080	True	NM_012410,NM_181718,NM_001114100,NM_001114099,NM_201575	chr16,chr16,chr16,chr16,chr16	-,+,-,-,-	SEZ6L2,ASPHD1,SEZ6L2,SEZ6L2,SEZ6L2	-2158,-642,-2158,-2158,-2158
chr2:27429432-27430307	chr2	+	27429606	27430266	True	NM_021095,NM_001170795,NM_004341,NR_028323,NM_016085,NM_080592	chr2,chr2,chr2,chr2,chr2,chr2	-,+,+,-,+,+	SLC5A6,C2orf28,CAD,SLC5A6,C2orf28,C2orf28	4959,4952,9991,4959,4952,4632
chr5:33989457-33990438	chr5	+	33989476	33990365	True	NM_001012509,NM_016568,NM_016180	chr5,chr5,chr5	-,+,-	SLC45A2,RXFP3,SLC45A2	-4696,-53036,-4696
chr17:65364594-65365607	chr17	+	65364810	65365145	True	NM_002816,NM_181671,NM_012417,NM_174871	chr17,chr17,chr17,chr17	-,+,+,-	PSMD12,PITPNC1,PITPNC1,PSMD12	-2089,8778,8778,-2089
chr8:21768752-21769041	chr8	+	21768767	21768835	True	NM_003974,NM_015024	chr8,chr8	-,+	DOK2,XPO7	2420,8344
chr3:119248008-119248505	chr3	+	119248105	119248552	True	NM_016589,NM_005191	chr3,chr3	+,-	C3orf1,CD80	-30795,29982
chr18:2655399-2655612	chr18	+	2655401	2655603	True	NR_033754,NM_015295	chr18,chr18	-,+	LOC645158,SMCHD1	-2170,282
chr12:69752864-69753708	chr12	+	69752966	69753636	True	NM_006530,NR_031692	chr12,chr12	+,-	YEATS4,MIR1279	-105,-85968
chr12:26968880-26969968	chr12	+	26969250	26969852	True	NM_002223,NM_001171888	chr12,chr12	-,+	ITPR2,FGFR1OP2	16333,121452
chr21:46221089-46221393	chr21	+	46221093	46221393	True	NM_182688,NM_003343,NM_198699,NM_001202489	chr21,chr21,chr21,chr21	-,-,+,-	UBE2G2,UBE2G2,KRTAP10-12,UBE2G2	408,408,-104057,408
chr20:58294511-58295400	chr20	+	58294577	58295290	True	NM_014258,NM_183246,NM_183244	chr20,chr20,chr20	-,+,+	SYCP2,PHACTR3,PHACTR3	211969,974,974
chr18:31159034-31159505	chr18	+	31159065	31159520	True	NM_030632,NM_198995	chr18,chr18	+,-	ASXL3,C18orf34	-577,-138380
chr18:7230459-7231384	chr18	+	7230475	7231393	True	NM_005559,NM_001105581	chr18,chr18	-,+	LAMA1,LRRC30	-112662,97
chr10:104613611-104613999	chr10	+	104613776	104614048	True	NM_000102,NM_144591,NR_037644,NM_001136200	chr10,chr10,chr10,chr10	-,+,+,+	CYP17A1,C10orf32,C10orf32-AS3MT,C10orf32	-16486,18,18,18
chr3:49054099-49055410	chr3	+	49054247	49055192	True	NM_001009996,NM_199074,NM_199073,NR_029948,NM_199070,NR_029690,NM_018114,NM_199069,NM_018031	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,+,-,+,-,-,+,+	DALRD3,NDUFAF3,NDUFAF3,MIR425,NDUFAF3,MIR191,DALRD3,NDUFAF3,WDR6	875,2715,3425,2525,3881,3000,3325,3881,-9661
chr6:26122203-26122578	chr6	+	26122350	26122628	True	NM_003526,NM_003512	chr6,chr6	-,+	HIST1H2BC,HIST1H2AC	1556,1744
chr10:134002712-134002924	chr10	+	134002752	134002962	True	NM_006426,NM_173575	chr10,chr10	+,-	DPYSL4,STK32C	-2389,118565
chr17:28587617-28589533	chr17	+	28587929	28589477	True	NM_001304,NM_001045	chr17,chr17	+,-	CPD,SLC6A4	116464,-24975
chr1:100362664-100363693	chr1	+	100362708	100363579	True	NM_000645,NM_001013660	chr1,chr1	+,-	AGL,FRRS1	-35994,-131359
chr6:27877996-27879287	chr6	+	27878100	27879133	True	NM_033057,NM_003527	chr6,chr6	-,+	OR2B2,HIST1H2BO	1097,-16956
chr19:6738828-6739231	chr19	+	6738867	6739275	True	NM_004240,NM_001080452	chr19,chr19	+,-	TRIP10,GPR108	431,-1234
chrX:47246152-47246612	chrX	+	47246280	47246354	True	NR_003710,NM_007130	chrX,chrX	+,-	SNORA11C,ZNF41	1694,96041
chr11:72979183-72980608	chr11	+	72979243	72980556	True	NM_014824,NM_176797,NM_176796,NM_176798,NM_004154	chr11,chr11,chr11,chr11,chr11	-,+,+,+,+	FCHSD2,P2RY6,P2RY6,P2RY6,P2RY6	-126100,-3724,-3724,382,2690
chr9:131101261-131102443	chr9	+	131101919	131102395	True	NM_015679,NM_005094	chr9,chr9	-,+	TRUB2,SLC27A4	-17222,443
chr15:27215455-27216006	chr15	+	27215596	27215974	True	NM_021912,NM_033223	chr15,chr15	-,+	GABRB3,GABRG3	-196661,454
chr15:63334766-63335154	chr15	+	63334905	63335131	True	NM_001018020,NM_001018007,NM_001018004,NM_001018005,NM_001018008,NM_000366,NM_001018006,NM_015920	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,-	TPM1,TPM1,TPM1,TPM1,TPM1,TPM1,TPM1,RPS27L	-118,-118,-118,-118,5504,-118,-118,114660
chr20:4982785-4983135	chr20	+	4982785	4983172	True	NM_005116,NR_028370,NM_203327	chr20,chr20,chr20	-,+,-	SLC23A2,PCNA-AS1,SLC23A2	-640,117059,7818
chr5:154232682-154233612	chr5	+	154233266	154233662	True	NM_004779,NM_032385	chr5,chr5	+,-	CNOT8,C5orf4	4535,-3053
chr17:26126257-26127388	chr17	+	26126301	26127295	True	NM_000625,NR_024043	chr17,chr17	-,+	NOS2,LGALS9	317,-168180
chrX:15336157-15336919	chrX	+	15336182	15336798	True	NM_001201583,NM_080873,NM_001012428,NM_203281	chrX,chrX,chrX,chrX	-,-,-,+	ASB11,ASB11,ASB11,BMX	-2436,-2436,-3501,182101
chr4:40520352-40520950	chr4	+	40520485	40520929	True	NM_019027,NM_017581	chr4,chr4	-,+	RBM47,CHRNA9	-2495,-183083
chr11:5177852-5178421	chr11	+	5178214	5178474	True	NM_001001916,NM_012375	chr11,chr11	+,-	OR52J3,OR52A1	-110516,-4615
chr19:11449036-11449709	chr19	+	11449354	11449544	True	NM_001080503,NM_001145416,NM_033408,NM_004283,NM_198536	chr19,chr19,chr19,chr19,chr19	+,-,-,-,-	CCDC159,TMEM205,TMEM205,RAB3D,TMEM205	7636,7487,7487,850,7487
chr22:19949657-19950052	chr22	+	19949690	19949914	True	NM_006440,NM_007310	chr22,chr22	-,+	TXNRD2,COMT	-20331,155
chr6:159242193-159244081	chr6	+	159242414	159244090	True	NM_001111077,NM_003379,NM_001195032	chr6,chr6,chr6	-,-,+	EZR,EZR,C6orf99	-1958,-3074,65528
chr17:40175874-40176645	chr17	+	40175961	40176491	True	NM_003315,NM_001144766,NR_029431,NM_001144929,NM_001144928,NM_017595,NM_001144927,NM_001001349	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,+,+,+,+,+	DNAJC7,DNAJC7,DNAJC7,NKIRAS2,NKIRAS2,NKIRAS2,NKIRAS2,NKIRAS2	-6246,-6778,-6246,-3925,-3925,-3925,-3925,-6418
chr12:80322861-80323265	chr12	+	80322871	80323183	True	NM_001143885,NM_002480,NM_173591	chr12,chr12,chr12	-,-,+	PPP1R12A,PPP1R12A,OTOGL	6114,5857,280049
chr8:61430598-61430935	chr8	+	61430600	61430942	True	NM_002865,NM_004056	chr8,chr8	+,-	RAB2A,CA8	-1092,-236646
chr3:4534381-4534599	chr3	+	4534400	4534596	True	NM_001099952,NM_001168272,NM_002222,NM_182760	chr3,chr3,chr3,chr3	+,+,+,-	ITPR1,ITPR1,ITPR1,SUMF1	435,435,435,-25434
chr15:43880341-43880802	chr15	+	43880506	43880829	True	NM_001190214,NM_014659,NM_001130858,NM_001130859,NM_020990	chr15,chr15,chr15,chr15,chr15	-,-,-,-,+	PPIP5K1,PPIP5K1,PPIP5K1,PPIP5K1,CKMT1B	1673,-3416,1673,1673,4422
chr15:43880341-43880802	chr15	+	43980338	43980661	False	NM_001015001,NM_172097	chr15,chr15	+,-	CKMT1A,CATSPER2	4422,-39299
chr17:79304103-79304611	chr17	+	79304581	79304647	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	68892,-107
chr7:26903920-26904143	chr7	+	26903950	26904162	True	NM_003930,NM_001145531	chr7,chr7	-,+	SKAP2,C7orf71	229,-226511
chr2:180822451-180824171	chr2	+	180822653	180824194	True	NM_182678,NM_020943	chr2,chr2	+,-	UBE2E3,CWC22	1020917,47643
chr7:138481518-138482053	chr7	+	138481564	138481894	True	NM_020632,NM_130840,NM_001085429	chr7,chr7,chr7	-,-,+	ATP6V0A4,ATP6V0A4,TMEM213	1097,1097,844
chr9:132427416-132427828	chr9	+	132427521	132427791	True	NM_016307,NM_177999	chr9,chr9	+,-	PRRX2,ASB6	128,-23073
chr8:91801471-91803410	chr8	+	91801535	91803363	True	NM_001146273,NM_022351	chr8,chr8	-,+	TMEM64,NECAB1	-143402,557
chr8:121495232-121497008	chr8	+	121495314	121496846	True	NM_022045,NM_014078	chr8,chr8	+,-	MTBP,MRPL13	-37706,-37667
chr9:79793510-79794311	chr9	+	79793537	79794277	True	NM_001018037,NR_026668,NM_033305,NM_015186,NM_001018038	chr9,chr9,chr9,chr9,chr9	+,-,+,+,+	VPS13A,LOC100286938,VPS13A,VPS13A,VPS13A	-1227,-704,-1227,-1227,-1227
chr19:12845561-12846514	chr19	+	12846201	12846499	True	NM_004317,NM_024038	chr19,chr19	+,-	ASNA1,C19orf43	1806,-672
chr2:242446397-242446683	chr2	+	242446501	242446615	True	NM_032515,NM_006374	chr2,chr2	+,-	BOK,STK25	51576,1469
chr22:32548176-32548418	chr22	+	32548339	32548437	True	NM_001010859,NR_033411	chr22,chr22	-,+	C22orf42,SLC5A1	6856,-93233
chr22:32548176-32548418	chr22	+	32547264	32547344	False	NM_001010859,NR_033411	chr22,chr22	-,+	C22orf42,SLC5A1	7949,-92158
chr8:126444430-126445716	chr8	+	126444453	126445630	True	NM_014846,NM_025195	chr8,chr8	-,+	KIAA0196,TRIB1	-340392,-1941
chr19:6773477-6774739	chr19	+	6773656	6774132	True	NM_005490,NM_005428	chr19,chr19	-,+	SH2D3A,VAV1	-6133,-985
chr10:90967241-90967585	chr10	+	90967240	90967628	True	NM_003956,NM_001547	chr10,chr10	-,+	CH25H,IFIT2	-169,94077
chr17:4338096-4339149	chr17	+	4338885	4339049	True	NM_003342,NM_182538	chr17,chr17	-,+	UBE2G1,SPNS3	-68916,-1717
chr3:193969862-193970639	chr3	+	193969944	193970654	True	NR_024480,NM_005524	chr3,chr3	-,+	LOC100131551,HES1	59989,-116064
chr15:85262685-85264286	chr15	+	85262812	85263953	True	NM_014630,NM_014300	chr15,chr15	+,-	ZNF592,SEC11A	27864,-3138
chr3:46500155-46501130	chr3	+	46500352	46501170	True	NM_002343,NM_001199149,NM_031440	chr3,chr3,chr3	-,-,+	LTF,LTF,RTP3	5478,4041,38314
chr3:119422007-119422327	chr3	+	119422029	119422369	True	NM_033364,NM_005694	chr3,chr3	+,-	C3orf15,COX17	-211,-25786
chr16:79632329-79632623	chr16	+	79632363	79632625	True	NM_005360,NM_130897,NM_001031804	chr16,chr16,chr16	-,+,-	MAF,DYNLRB2,MAF	2047,942228,2047
chr15:80210975-80211497	chr15	+	80211282	80211474	True	NR_037653,NR_028330,NR_037652,NM_001100880,NM_001100879,NM_001199757,NM_001199760	chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,+,-,-,-,-,-	ST20,C15orf37,ST20,ST20,ST20,ST20,ST20-MTHFS	4672,3638,4672,4240,-3684,4240,4024
chr16:75176187-75177844	chr16	+	75176345	75177895	True	NM_194436,NM_153688	chr16,chr16	-,+	LDHD,ZFP1	-25675,4525
chr5:140782996-140783236	chr5	+	140783041	140783285	True	NM_018925,NM_032090,NM_032100,NM_018921,NM_032099,NM_032089,NM_018926,NM_005642,NM_018913	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,+,-,+	PCDHGB5,PCDHGA10,PCDHGB6,PCDHGA9,PCDHGB5,PCDHGA9,PCDHGB6,TAF7,PCDHGA10	-5397,9457,4484,-572,-5397,-572,4484,-82690,9457
chr19:13613089-13614651	chr19	+	13613103	13614651	True	NM_001127222,NM_001127221,NM_000068,NM_001174080,NM_023035,NM_030818	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,+	CACNA1A,CACNA1A,CACNA1A,CACNA1A,CACNA1A,CCDC130	2673,2673,2673,2673,2673,244101
chr7:156740928-156741227	chr7	+	156741115	156741200	True	NM_022458,NM_138400	chr7,chr7	-,+	LMBR1,NOM1	-55213,1216
chr2:25475595-25476384	chr2	+	25475647	25476379	True	NM_153759,NM_014971	chr2,chr2	-,+	DNMT3A,EFR3B	-467,-210726
chr11:63707092-63707352	chr11	+	63707102	63707380	True	NM_024771,NM_173587	chr11,chr11	+,-	NAA40,RCOR2	-711,-22786
chr12:4382139-4382679	chr12	+	4382196	4382625	True	NM_001759,NM_020638	chr12,chr12	+,-	CCND2,FGF23	276,106319
chr10:91094541-91095354	chr10	+	91094789	91095375	True	NM_001549,NM_000235,NM_001031683	chr10,chr10,chr10	+,-,+	IFIT3,LIPA,IFIT3	-7246,-83129,-2609
chr22:30277831-30278390	chr22	+	30277933	30278063	True	NM_021090,NM_153051,NM_153050,NM_032204	chr22,chr22,chr22,chr22	+,+,+,-	MTMR3,MTMR3,MTMR3,ASCC2	1094,1094,1094,-43679
chr12:10868739-10869434	chr12	+	10868886	10869418	True	NM_003651,NM_001145426,NM_005042	chr12,chr12,chr12	-,-,+	CSDA,CSDA,PRH2	6585,6585,212415
chr11:111633567-111634805	chr11	+	111633775	111634781	True	NM_181699,NM_181700,NM_022761,NM_002716,NM_001177563,NM_001177562	chr11,chr11,chr11,chr11,chr11,chr11	-,-,+,-,-,-	PPP2R1B,PPP2R1B,C11orf1,PPP2R1B,PPP2R1B,PPP2R1B	2445,2445,115166,2445,2445,2445
chr20:57415599-57415851	chr20	+	57415611	57415845	True	NM_016592,NR_002785	chr20,chr20	+,-	GNAS,GNAS-AS1	-867,10163
chr10:18947652-18948159	chr10	+	18947744	18948204	True	NM_178815,NM_182543	chr10,chr10	+,-	ARL5B,NSUN6	108,-7194
chr1:173887749-173888954	chr1	+	173887979	173888387	True	NM_001122770,NM_000488	chr1,chr1	+,-	ZBTB37,SERPINC1	-50544,-1463
chr19:47163328-47163765	chr19	+	47163729	47163807	True	NM_005184,NM_145056	chr19,chr19	+,-	CALM3,DACT3	-59268,638
chr12:125811212-125812481	chr12	+	125811278	125812436	True	NM_032656,NM_052907	chr12,chr12	-,+	DHX37,TMEM132B	-337611,-168
chr16:79752878-79753405	chr16	+	79752892	79753229	True	NM_005360,NM_130897	chr16,chr16	-,+	MAF,DYNLRB2	-118270,821624
chr19:55386346-55388095	chr19	+	55386705	55387286	True	NM_002000,NM_001127255,NM_133279,NM_133278,NM_133269,NM_133274,NM_133277,NM_133271,NM_133273,NM_133272	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+,+,+,+,+	FCAR,NLRP7,FCAR,FCAR,FCAR,FCAR,FCAR,FCAR,FCAR,FCAR	-1207,71644,-1207,-1207,-1207,-1207,-1207,-1207,-1207,-1207
chr1:233426673-233427276	chr1	+	233426730	233427078	True	NM_032435,NM_014801	chr1,chr1	+,-	KIAA1804,PCNXL2	36435,4431
chr12:1099556-1099895	chr12	+	1099611	1099839	True	NM_134424,NR_027946,NM_178039,NR_027948,NR_027949,NM_178040	chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,+,+,+	RAD52,ERC1,ERC1,ERC1,ERC1,ERC1	-40748,564,564,564,564,564
chr21:42792037-42792263	chr21	+	42792041	42792179	True	NM_002462,NM_001135099,NM_001178046,NM_001144925	chr21,chr21,chr21,chr21	+,-,+,+	MX1,TMPRSS2,MX1,MX1	5798,87863,5923,340
chr2:172780828-172781741	chr2	+	172780993	172781468	True	NR_027862,NM_003705,NM_003642	chr2,chr2,chr2	+,-,+	HAT1,SLC25A12,HAT1	-2118,-30180,-2118
chr15:101463425-101464276	chr15	+	101463522	101464160	True	NM_001040616,NM_024652	chr15,chr15	-,+	LINS,LRRK1	-321077,-4113
chr15:83855280-83856360	chr15	+	83855513	83856354	True	NM_016073,NM_023003	chr15,chr15	-,+	HDGFRP3,TM6SF1	20018,-79241
chr1:150247737-150248265	chr1	+	150248140	150248253	True	NM_016022,NM_024579,NM_001077628,NM_144697	chr1,chr1,chr1,chr1	-,+,-,+	APH1A,C1orf54,APH1A,C1orf51	-6608,-3016,-6608,6975
chr17:76128403-76128619	chr17	+	76128426	76128506	True	NM_007267,NM_001127198,NM_152468	chr17,chr17,chr17	-,-,+	TMC6,TMC6,TMC8	32,-3565,-1618
chr22:38203377-38203587	chr22	+	38203422	38203626	True	NM_138797,NM_014291,NM_005318,NM_001171690	chr22,chr22,chr22,chr22	-,+,+,+	ANKRD54,GCAT,H1F0,GCAT	36777,285,-2364,285
chr8:133654986-133655404	chr8	+	133654987	133655297	True	NM_012472,NM_198513	chr8,chr8	-,+	LRRC6,PHF20L1	32566,132306
chr9:101555281-101556257	chr9	+	101555316	101555739	True	NM_173551,NM_024642	chr9,chr9	-,+	ANKS6,GALNT12	3114,14241
chr22:31481551-31481862	chr22	+	31481687	31481815	True	NM_134269,NM_006932,NM_134270,NM_080430	chr22,chr22,chr22,chr22	+,+,+,-	SMTN,SMTN,SMTN,SELM	-4433,-4433,-4433,21786
chr7:44924462-44925000	chr7	+	44924539	44924833	True	NM_033224,NM_021130	chr7,chr7	-,+	PURB,PPIA	177,-88349
chr2:207646964-207647979	chr2	+	207647134	207647918	True	NR_036077,NR_036078	chr2,chr2	-,+	MIR3130-1,MIR3130-2	164,39
chr4:17581779-17581982	chr4	+	17581931	17582011	True	NM_000320,NM_015907	chr4,chr4	-,+	QDPR,LAP3	-68074,-3058
chr19:49459544-49460622	chr19	+	49459548	49460436	True	NM_000146,NM_004324,NM_138764,NM_001161587,NM_138763,NM_138761,NR_027882	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,-,+,+,+	FTL,BAX,BAX,GYS1,BAX,BAX,BAX	8129,-1482,-1482,36224,-1482,-1482,-1482
chr20:2645378-2645616	chr20	+	2645398	2645481	True	NR_004399,NR_002981,NM_006899,NR_002738,NR_002739,NM_174855,NM_174856	chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,+,-,+,+,-,-	SNORD86,SNORA51,IDH3B,SNORD57,SNORD56,IDH3B,IDH3B	-8709,-9739,-555,-7867,-8182,-555,-555
chr20:50387409-50388119	chr20	+	50387567	50387954	True	NM_006045,NM_014484	chr20,chr20	-,+	ATP9A,MOCS3	-2659,-812267
chr10:74115625-74115978	chr10	+	74115792	74115992	True	NM_019058,NM_017626,NM_001002762	chr10,chr10,chr10	+,-,-	DDIT4,DNAJB12,DNAJB12	-82174,-885,-885
chr5:63457596-63458711	chr5	+	63457799	63458723	True	NM_000524,NM_178532,NM_001113561	chr5,chr5,chr5	-,+,+	HTR1A,RNF180,RNF180	-200253,2947,2947
chr5:139029680-139030059	chr5	+	139029698	139029976	True	NM_016463,NM_198282	chr5,chr5	+,-	CXXC5,TMEM173	-1448,-167355
chr6:149804774-149805128	chr6	+	149804974	149805158	True	NM_207360,NM_138785	chr6,chr6	-,+	ZC3H12D,C6orf72	1040,82369
chr14:57707158-57708705	chr14	+	57707290	57708521	True	NM_018229,NM_006544	chr14,chr14	+,-	MUDENG,EXOC5	27084,27157
chr19:54745132-54745494	chr19	+	54745211	54745467	True	NM_001013,NM_024318	chr19,chr19	+,-	RPS9,LILRA6	-40536,1307
chr19:54745132-54745494	chr19	-	55209277	55209327	False	NR_003061,NM_145057	chr19,chr19	+,-	LILRP2,CDC42EP5	10273,-224855
chr19:54745132-54745494	chr19	+	54725459	54725715	False	NM_001013,NM_001081450,NM_006864	chr19,chr19,chr19	+,-,-	RPS9,LILRB3,LILRB3	-20784,1294,1294
chr1:63249075-63249734	chr1	+	63249286	63249750	True	NM_033407,NM_178221,NM_032852	chr1,chr1,chr1	-,+,+	DOCK7,ATG4C,ATG4C	-95317,26,26
chr17:54280927-54281210	chr17	+	54280955	54281113	True	NM_153228,NM_001099640	chr17,chr17	+,-	ANKFN1,TMEM100	-50171,-471473
chr17:34890345-34890586	chr17	+	34890357	34890608	True	NM_001163735,NM_178517,NM_001033580,NM_025109	chr17,chr17,chr17,chr17	-,+,-,-	MYO19,PIGW,MYO19,MYO19	747,794,747,747
chr3:52739290-52739494	chr3	+	52739326	52739513	True	NM_001010983,NM_152932,NM_014041,NM_018446	chr3,chr3,chr3,chr3	-,-,+,-	GLT8D1,GLT8D1,SPCS1,GLT8D1	585,-1704,343,585
chrY:15583375-15583592	chrY	+	15583374	15583443	True	NM_007125,NM_182659,NM_182660,NM_004202	chrY,chrY,chrY,chrY	-,-,-,+	UTY,UTY,UTY,TMSB4Y	9166,9166,9166,232003
chr7:102791076-102792052	chr7	+	102791692	102791856	True	NR_026660,NM_198990,NM_001122838,NM_031905	chr7,chr7,chr7,chr7	-,-,-,+	RPL19P12,NAPEPLD,NAPEPLD,ARMC10	-8842,-2123,-2123,-76415
chr14:105046660-105047243	chr14	+	105046746	105047288	True	NM_207379,NM_001008404	chr14,chr14	-,+	TMEM179,C14orf180	23859,-741
chr5:112048278-112048722	chr5	+	112048414	112048600	True	NM_001127511,NM_005669	chr5,chr5	+,-	APC,REEP5	-5269,209481
chr4:147827010-147828808	chr4	+	147827249	147828487	True	NM_004575,NM_031956	chr4,chr4	+,-	POU4F2,TTC29	-267255,38612
chr11:62623863-62624150	chr11	+	62623901	62624119	True	NR_003098,NR_002559,NR_002561,NR_002563,NR_002562,NM_001012662,NR_002560,NM_001012664,NR_002565,NR_002564,NM_002394,NR_000008	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,-,+,-,+,-,-,+,-	SNHG1,SNORD29,SNORD30,SNORD27,SNORD28,SLC3A2,SNORD31,SLC3A2,SNORD25,SNORD26,SLC3A2,SNORD22	-541,-2461,-2697,-1346,-1734,-468,-3036,-468,-798,-1063,-468,-3394
chr1:164541387-164542117	chr1	+	164541456	164542151	True	NM_001174069,NM_002585	chr1,chr1	-,+	LMX1A,PBX1	783378,-12917
chr2:70352361-70352833	chr2	+	70352616	70352743	True	NM_006196,NR_024444	chr2,chr2	+,-	PCBP1,LOC100133985	-38089,-168
chr15:63891969-63892362	chr15	+	63891976	63892386	True	NR_034080,NM_203373	chr15,chr15	-,+	LOC100130855,FBXL22	690,-2475
chr10:127586678-127587251	chr10	+	127586852	127587288	True	NM_018180,NM_145235	chr10,chr10	-,+	DHX32,FANK1	-16968,-1804
chr1:155578911-155579127	chr1	+	155578910	155579012	True	NM_018116,NM_018489	chr1,chr1	+,-	MSTO1,ASH1L	994,-46586
chr6:166752682-166753270	chr6	+	166752725	166753313	True	NM_145169,NR_027284	chr6,chr6	-,+	SFT2D1,LOC441177	2728,-351737
chr10:102892129-102892347	chr10	+	102892143	102892263	True	NM_005521,NM_001195517,NM_001085398	chr10,chr10,chr10	+,+,-	TLX1,TLX1,TLX1NB	-1133,-1133,-1240
chr5:172073399-172073956	chr5	+	172073553	172073811	True	NM_001142651,NM_004417	chr5,chr5	+,-	NEURL1B,DUSP1	-5329,124442
chr11:68226595-68226873	chr11	+	68226736	68226812	True	NM_018312,NM_001164164,NM_001164161,NM_001164160,NM_001164163,NM_001164162,NM_022338	chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,+,-	PPP6R3,PPP6R3,PPP6R3,PPP6R3,PPP6R3,PPP6R3,C11orf24	1373,1373,1373,1373,1373,1373,-187267
chrX:54825118-54825702	chrX	+	54825155	54825687	True	NM_177433,NM_201222,NM_014599,NM_198510	chrX,chrX,chrX,chrX	+,+,+,-	MAGED2,MAGED2,MAGED2,ITIH5L	8483,9805,9109,-482
chr1:171619077-171620873	chr1	+	171619080	171620888	True	NM_001007239,NM_000261	chr1,chr1	+,-	METTL13,MYOC	129872,937
chr10:64576029-64576278	chr10	+	64576037	64576195	True	NM_001136179,NM_001136178,NM_032804,NM_001136177,NM_000399	chr10,chr10,chr10,chr10,chr10	-,-,+,-,-	EGR2,EGR2,ADO,EGR2,EGR2	1,2782,-11572,1,1
chr8:139512969-139513983	chr8	+	139512993	139513987	True	NM_015912,NM_017444	chr8,chr8	-,+	FAM135B,CHRAC1	-3928,2007413
chr5:137801398-137801604	chr5	+	137801492	137801580	True	NM_004730,NM_001964	chr5,chr5	-,+	ETF1,EGR1	77402,-362
chr11:62751955-62752287	chr11	+	62752016	62752314	True	NR_037193,NM_153278,NM_153277,NM_153276,NM_004790	chr11,chr11,chr11,chr11,chr11	+,-,-,-,-	SLC3A2,SLC22A6,SLC22A6,SLC22A6,SLC22A6	-102896,205,205,205,205
chr1:64019101-64020101	chr1	+	64019355	64019995	True	NR_002771,NM_014288	chr1,chr1	+,-	DLEU2L,ITGB3BP	-4762,-30520
chr10:38487440-38489431	chr10	+	38487813	38489301	True	NR_027269,NR_024524	chr10,chr10	-,+	SEPT7L,LOC100129055	202529,-23267
chr11:61976843-61978486	chr11	+	61976905	61978155	True	NM_206998,NM_002407	chr11,chr11	-,+	SCGB1D4,SCGB2A1	88431,-816
chr19:45202960-45203254	chr19	+	45202963	45203091	True	NM_001039213,NR_027754	chr19,chr19	+,-	CEACAM16,CEACAM22P	-593,-142813
chr12:57611014-57612681	chr12	+	57611130	57612552	True	NM_020142,NM_007224	chr12,chr12	-,+	NDUFA4L2,NXPH4	21973,-603
chr3:160474785-160475325	chr3	+	160474797	160475301	True	NM_139245,NM_002268	chr3,chr3	+,-	PPM1L,KPNA4	-859,-191421
chr19:49440558-49440789	chr19	+	49440599	49440663	True	NM_003323,NM_014475	chr19,chr19	-,+	TULP2,DHDH	-38603,-3711
chr20:22557772-22557989	chr20	+	22557886	22557984	True	NM_021784,NM_153675,NR_001558,NM_001052	chr20,chr20,chr20,chr20	-,-,-,+	FOXA2,FOXA2,NCRNA00261,SSTR4	7167,8167,1346,458072
chr4:102728210-102728957	chr4	+	102728214	102728905	True	NM_001083907,NM_001130692	chr4,chr4	+,-	BANK1,PPP3CA	6077,-459586
chr2:210468747-210470501	chr2	+	210468817	210470535	True	NM_152519,NM_031847	chr2,chr2	-,+	C2orf67,MAP2	565566,-24465
chr22:50911385-50912275	chr22	+	50911451	50911975	True	NM_024866,NM_002972	chr22,chr22	+,-	ADM2,SBF1	8036,1539
chr7:131377550-131379396	chr7	+	131378029	131379361	True	NM_005397,NM_013255	chr7,chr7	-,+	PODXL,MKLN1	-136653,-365485
chr16:58031492-58031993	chr16	+	58031497	58031941	True	NM_001195302,NM_001204911,NM_020807,NM_024598	chr16,chr16,chr16,chr16	+,+,-,+	C16orf57,C16orf57,ZNF319,C16orf57	3335,3335,1871,3335
chr5:177660221-177660717	chr5	+	177660220	177660618	True	NM_153373,NM_031266	chr5,chr5	-,+	AGXT2L2,HNRNPAB	-417,-28763
chr9:125132714-125133194	chr9	+	125132774	125133178	True	NR_027126,NM_080591,NM_000962	chr9,chr9,chr9	-,+,+	RBM18,PTGS1,PTGS1	-105631,50,50
chrX:77396168-77396812	chrX	+	77396183	77396647	True	NM_000291,NM_015975	chrX,chrX	+,-	PGK1,TAF9B	-36568,-1004
chr9:19256922-19257208	chr9	+	19257074	19257218	True	NM_001010,NM_017925	chr9,chr9	-,+	RPS6,DENND4C	123068,33530
chr5:172097895-172098214	chr5	+	172097967	172098157	True	NM_001142651,NM_004417	chr5,chr5	+,-	NEURL1B,DUSP1	-29742,100098
chr20:30061026-30061632	chr20	+	30061052	30061642	True	NM_001037500,NM_014012	chr20,chr20	-,+	DEFB124,REM1	-236,1462
chr5:60462928-60463885	chr5	+	60463085	60463643	True	NM_001048249,NM_020928	chr5,chr5	-,+	C5orf43,ZSWIM6	-4783,164456
chrX:149011881-149013008	chrX	+	149011934	149012946	True	NM_001166400,NM_001166401,NM_005364,NM_001013845	chrX,chrX,chrX,chrX	+,+,+,-	MAGEA8,MAGEA8,MAGEA8,CXorf40B	-2044,-2044,-2044,93820
chrX:129305320-129305563	chrX	+	129305322	129305462	True	NM_001130847,NM_004794,NM_004208,NM_145812,NM_145813	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	AIFM1,RAB33A,AIFM1,AIFM1,AIFM1	-5461,310,-5461,-5461,-5461
chr11:6643448-6643933	chr11	+	6643454	6643958	True	NM_001014795,NM_000391	chr11,chr11	+,-	ILK,TPP1	-18298,-2762
chr2:71206181-71207165	chr2	+	71206336	71207150	True	NM_144582,NM_024933,NM_001115116	chr2,chr2,chr2	-,+,+	TEX261,ANKRD53,ANKRD53	14903,-812,-812
chr3:58223608-58223849	chr3	+	58223724	58223792	True	NM_020676,NM_004944	chr3,chr3	+,-	ABHD6,DNASE1L3	-516,-23326
chr4:185571059-185571530	chr4	+	185571096	185571552	True	NM_152683,NM_032991,NM_004346	chr4,chr4,chr4	+,-,-	CCDC111,CASP3,CASP3	-381,-467,-467
chr17:46691601-46691818	chr17	+	46691730	46691822	True	NM_024016,NM_004502,NM_018952,NR_033205	chr17,chr17,chr17,chr17	-,-,-,+	HOXB8,HOXB7,HOXB6,LOC404266	529,-3347,-9396,-18461
chr13:44208226-44209426	chr13	+	44208345	44209452	True	NM_001128303,NM_001127615	chr13,chr13	+,-	C13orf31,ENOX1	243967,-4732
chr3:69063132-69063933	chr3	+	69063217	69063938	True	NM_006407,NM_173654	chr3,chr3	+,-	ARL6IP5,C3orf64	70151,-443
chr3:184080930-184081194	chr3	+	184081019	184081159	True	NM_004366,NM_001171088,NM_001171087,NM_006232,NM_001171089	chr3,chr3,chr3,chr3,chr3	-,-,-,+,-	CLCN2,CLCN2,CLCN2,POLR2H,CLCN2	-1628,-1628,-1628,34,-1628
chr15:65133617-65133822	chr15	+	65133632	65133830	True	NM_001195059,NM_025049,NM_025201	chr15,chr15,chr15	+,-,+	PLEKHO2,PIF1,PLEKHO2	251,-15794,251
chr1:32930955-32931321	chr1	+	32931164	32931271	True	NM_001145720,NM_018045	chr1,chr1	+,-	ZBTB8B,BSDC1	-557,-71102
chr2:204497578-204498399	chr2	+	204497703	204498434	True	NM_006139,NM_203365	chr2,chr2	+,-	CD28,RAPH1	72763,-97645
chr17:25619285-25619717	chr17	+	25619489	25619549	True	NM_015626,NM_000625,NM_134265	chr17,chr17,chr17	+,-,+	WSB1,NOS2,WSB1	1556,508056,1556
chr3:183856916-183858375	chr3	+	183857434	183858250	True	NM_003907,NM_005787	chr3,chr3	+,-	EIF2B5,ALG3	-4675,108559
chr1:46247384-46248112	chr1	+	46247450	46247676	True	NM_005897,NM_015112	chr1,chr1	-,+	IPP,MAST2	-30965,21608
chr10:6356699-6358628	chr10	+	6356764	6358348	True	NM_004566,NM_000417	chr10,chr10	+,-	PFKFB3,IL2RA	-111975,-252431
chr22:29460013-29460237	chr22	+	29460163	29460283	True	NM_001039570,NM_032045,NM_015370	chr22,chr22,chr22	+,+,-	KREMEN1,KREMEN1,C22orf31	8782,8782,-2256
chr10:99402437-99402902	chr10	+	99402439	99402557	True	NM_018425,NM_178832,NM_001098831	chr10,chr10,chr10	+,-,-	PI4K2A,MORN4,MORN4	-2048,-9095,-8526
chr7:25270993-25272268	chr7	+	25271115	25272303	True	NM_022150,NM_016447	chr7,chr7	-,+	NPVF,MPP6	-3010,-658087
chr8:74204382-74205287	chr8	+	74204437	74205311	True	NM_000971,NM_172037	chr8,chr8	-,+	RPL7,RDH10	608,1953
chr22:29979960-29980998	chr22	+	29980123	29980782	True	NM_181825,NM_001202502,NM_003634	chr22,chr22,chr22	+,-,-	NF2,NIPSNAP1,NIPSNAP1	18762,-3038,-2797
chr11:119040827-119041774	chr11	+	119040871	119041543	True	NM_001145018,NM_170722,NM_024618	chr11,chr11,chr11	-,+,+	CCDC153,NLRX1,NLRX1	25091,-1485,-1485
chr15:90545591-90545856	chr15	+	90545676	90545742	True	NM_182616,NM_198526	chr15,chr15	-,+	C15orf38,ZNF710	-89454,-975
chr9:2014149-2014673	chr9	+	2014178	2014598	True	NM_139045,NR_015375,NM_003070	chr9,chr9,chr9	+,-,+	SMARCA2,FLJ35024,SMARCA2	743,607825,743
chr1:215304362-215305149	chr1	+	215304536	215305190	True	NM_014217,NM_005401	chr1,chr1	+,-	KCNK2,PTPN14	-48034,-579512
chr11:63581812-63582770	chr11	+	63581880	63582728	True	NM_138471,NM_001144936	chr11,chr11	+,-	C11orf84,C11orf95	-1008,-45767
chr13:52984635-52985372	chr13	+	52984902	52985378	True	NM_001098525,NM_199263,NM_018676	chr13,chr13,chr13	+,-,-	CKAP2,THSD1,THSD1	44116,-4273,-4273
chr1:74686787-74687000	chr1	+	74686787	74687049	True	NM_015978,NM_001105659	chr1,chr1	+,-	TNNI3K,LRRIQ3	14021,-22916
chr6:88112939-88114554	chr6	+	88113272	88113912	True	NR_026784,NM_001031743,NM_198568	chr6,chr6,chr6	+,+,-	C6orf164,C6orf165,GJB7	-6481,3777,-74276
chr17:46018177-46018652	chr17	+	46018267	46018639	True	NM_024320,NM_018129	chr17,chr17	-,+	PRR15L,PNPO	16521,249
chr17:7454125-7454373	chr17	+	7454124	7454420	True	NM_172087,NM_003808,NM_003809,NM_172089,NM_172088,NM_006942,NM_001198624,NM_001198623,NM_001198622,NR_037146	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,-,+,+,+,+	TNFSF13,TNFSF13,TNFSF12,TNFSF12-TNFSF13,TNFSF13,SOX15,TNFSF13,TNFSF13,TNFSF13,TNFSF12	7188,7188,-1800,-1800,7188,39118,7188,7188,7188,-1800
chr4:113438389-113438726	chr4	+	113438414	113438558	True	NM_016648,NM_024019	chr4,chr4	+,-	LARP7,NEUROG2	119561,-1086
chr13:52173336-52174646	chr13	+	52173448	52174666	True	NM_052950,NM_001039938	chr13,chr13	+,-	WDFY2,INTS6	-15015,-146173
chr9:135280888-135281345	chr9	+	135280974	135281365	True	NM_007344,NM_207417	chr9,chr9	-,+	TTF1,C9orf171	906,4245
chr14:24872093-24872986	chr14	+	24872227	24872840	True	NM_001039771,NM_025081	chr14,chr14	-,+	CBLN3,NYNRIN	25942,-4286
chr1:159255902-159256213	chr1	+	159256015	159256106	True	NM_001004467,NM_002001	chr1,chr1	-,+	OR10J3,FCER1A	28402,3397
chr12:7077163-7078782	chr12	+	7077379	7078464	True	NR_029779,NM_007273,NR_029682,NM_001144831,NR_003010,NM_006331	chr12,chr12,chr12,chr12,chr12,chr12	+,-,+,-,-,+	MIR200C,PHB2,MIR141,PHB2,SCARNA12,EMG1	-4568,1478,-4170,1503,-610,1479
chr6:3003196-3003838	chr6	+	3003277	3003818	True	NR_033884,NM_000904	chr6,chr6	-,+	LOC401233,NQO2	21244,-3262
chr6:3003196-3003838	chr6	-	3052401	3052458	False	NR_033884,NM_003804	chr6,chr6	-,+	LOC401233,RIPK1	-27396,24599
chr5:71015000-71015480	chr5	+	71015096	71015476	True	NR_033968,NM_004291	chr5,chr5	-,+	LOC100049076,CARTPT	-459974,-157
chr1:55353268-55353555	chr1	+	55353281	55353529	True	NM_014762,NM_152607	chr1,chr1	-,+	DHCR24,C1orf177	-360,-81596
chr2:241620984-241621540	chr2	+	241621017	241621535	True	NM_198998,NM_001102467	chr2,chr2	+,-	AQP12A,AQP12B	9726,832
chr2:241620984-241621540	chr2	-	241632050	241632568	False	NM_198998,NM_001102467	chr2,chr2	+,-	AQP12A,AQP12B	-839,-9733
chr16:8817788-8818864	chr16	+	8818028	8818731	True	NM_001127448,NM_015421	chr16,chr16	+,-	ABAT,TMEM186	-3520,72824
chr12:118499831-118500080	chr12	+	118499938	118500054	True	NM_018639,NM_181578	chr12,chr12	-,+	WSB2,RFC5	-987,-45481
chr3:197283258-197284335	chr3	+	197283608	197284325	True	NM_203314,NM_004051,NM_001011537	chr3,chr3,chr3	-,-,+	BDH1,BDH1,FYTTD1	-750,-750,192098
chr17:73634748-73634957	chr17	+	73634767	73634863	True	NR_028439,NM_001162997,NM_001162995,NM_004259	chr17,chr17,chr17,chr17	+,+,+,-	LOC643008,LOC100130933,LOC643008,RECQL5	-2143,7782,-5304,28452
chr8:102796390-102798127	chr8	+	102796437	102798066	True	NM_024915,NM_032041	chr8,chr8	+,-	GRHL2,NCALD	-291820,5423
chr22:24034893-24035590	chr22	+	24035067	24035627	True	NM_153615,NR_024448	chr22,chr22	+,-	RGL4,LOC91316	-2070,24033
chr19:58545387-58545589	chr19	+	58545387	58545615	True	NM_182572,NM_025027	chr19,chr19	+,-	ZSCAN1,ZNF606	-4,-30673
chr12:95864890-95866343	chr12	+	95865294	95866361	True	NM_006838,NM_001042403	chr12,chr12	+,-	METAP2,USP44	1460,76309
chr3:130745616-130745819	chr3	+	130745625	130745773	True	NM_145910,NM_014065,NM_001146003,NM_024800	chr3,chr3,chr3,chr3	+,-,+,+	NEK11,ASTE1,NEK11,NEK11	12,15,12,12
chr15:49170192-49170483	chr15	+	49170199	49170415	True	NM_014335,NM_014985	chr15,chr15	+,-	EID1,CEP152	40,-66856
chr19:44649810-44651059	chr19	+	44649841	44650953	True	NM_001144824,NM_006630,NR_033341	chr19,chr19,chr19	+,+,-	ZNF234,ZNF234,LOC100379224	-4183,-4183,-32505
chr4:113233520-113234101	chr4	+	113233796	113234080	True	NM_052864,NM_025144	chr4,chr4	-,+	TIFA,ALPK1	-26737,-15356
chr12:20862737-20863232	chr12	+	20862864	20863135	True	NM_021094,NM_017435	chr12,chr12	-,+	SLCO1A2,SLCO1C1	624756,-14519
chr7:100037754-100038154	chr7	+	100037933	100038055	True	NM_019606,NM_145030	chr7,chr7	+,-	MEPCE,C7orf47	-10730,-3839
chrX:135334758-135335179	chrX	+	135334883	135334966	True	NM_024597,NM_001173516,NM_001173517,NM_153834	chrX,chrX,chrX,chrX	-,-,-,+	MAP7D3,MAP7D3,MAP7D3,GPR112	-1145,3730,-1145,48155
chr1:160148067-160149365	chr1	+	160148537	160149338	True	NM_052868,NM_001001734	chr1,chr1	-,+	IGSF8,ATP1A4	-80129,-1396
chrX:18987154-18987892	chrX	+	18987362	18987907	True	NM_000292,NR_029379	chrX,chrX	-,+	PHKA2,LOC100132163	14623,-79007
chr6:88982875-88984478	chr6	+	88983109	88984186	True	NM_030960,NM_016083	chr6,chr6	+,-	SPACA1,CNR1	-225654,-107342
chr12:120691307-120692645	chr12	+	120691330	120692328	True	NM_025157,NM_012240	chr12,chr12	-,+	PXN,SIRT4	-3373,47795
chr19:39262856-39263775	chr19	+	39262921	39263633	True	NM_002307,NM_001042507	chr19,chr19	-,+	LGALS7,LGALS7B	574,16216
chr19:39262856-39263775	chr19	-	39280365	39280917	False	NM_002307,NM_001042507	chr19,chr19	-,+	LGALS7,LGALS7B	-16208,-566
chr1:183617391-183619037	chr1	+	183617627	183618962	True	NM_015149,NM_203454	chr1,chr1	+,-	RGL1,APOBEC4	-12471,3543
chr15:45493338-45494461	chr15	+	45493417	45494319	True	NM_138356,NM_004212	chr15,chr15	-,+	SHF,SLC28A2	-44,50108
chr9:36193430-36194317	chr9	+	36193554	36194035	True	NM_001190383,NM_001184761,NM_001184760,NM_007096,NM_001076677,NM_001184762,NM_001833	chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,+,+,+,+,+,+	GNE,CLTA,CLTA,CLTA,CLTA,CLTA,CLTA	64512,-2753,-2753,-2753,-2753,-2753,-2753
chr7:27700175-27702013	chr7	+	27700467	27701837	True	NM_152740,NM_001079864	chr7,chr7	-,+	HIBADH,TAX1BP1	833,77900
chr1:32666744-32666953	chr1	+	32666869	32666931	True	NM_001160042,NM_018134,NM_001099434,NM_024296,NM_019118	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	IQCC,IQCC,DCDC2B,CCDC28B,TMEM234	4304,4304,7763,-718,21045
chr3:108408388-108409722	chr3	+	108408645	108409711	True	NM_014648,NM_032579	chr3,chr3	+,-	DZIP3,RETNLB	-100371,66469
chr20:33881014-33881980	chr20	+	33881030	33881988	True	NM_006690,NM_002212,NM_181466,NM_178468,NM_181468	chr20,chr20,chr20,chr20,chr20	+,-,-,-,-	MMP24,EIF6,EIF6,FAM83C,EIF6	-66542,-8436,-8436,-805,-8524
chr17:54897121-54897946	chr17	+	54897150	54897872	True	NM_001085430,NM_003647	chr17,chr17	-,+	C17orf67,DGKE	-3900,13587
chr11:845075-845385	chr11	+	845101	845369	True	NM_003271,NM_021128,NM_001025239,NM_001025238,NM_001025235,NM_001025234,NM_001025237,NM_001025236	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,-,+,+,+,+,+,+	TSPAN4,POLR2L,TSPAN4,TSPAN4,TSPAN4,TSPAN4,TSPAN4,TSPAN4	-2328,-2572,-2328,-2328,-2211,-1071,-706,-2211
chr3:49459302-49459608	chr3	+	49459332	49459652	True	NR_028435,NM_022171,NM_000481,NM_001664,NM_032316,NM_001164712,NM_001164710,NM_001164711	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-,-,-	AMT,TCTA,AMT,RHOA,NICN1,AMT,AMT,AMT	509,-9744,509,-9806,7155,509,509,509
chr3:27500403-27501819	chr3	+	27500514	27501458	True	NM_003615,NM_182523	chr3,chr3	-,+	SLC4A7,CMC1	-2269,781665
chr3:172165882-172166126	chr3	+	172165925	172166079	True	NM_018098,NM_004122,NM_198407	chr3,chr3,chr3	+,-,-	ECT2,GHSR,GHSR	306218,217,217
chr6:32604793-32605702	chr6	+	32604941	32605717	True	NM_002122,NM_002123	chr6,chr6	+,-	HLA-DQA1,HLA-DQB1	163,28799
chr20:62696147-62696667	chr20	+	62696174	62696614	True	NM_198723,NM_003195,NM_005873	chr20,chr20,chr20	+,+,-	TCEA2,TCEA2,RGS19	-7786,-2215,14281
chr20:23733325-23733825	chr20	+	23733352	23733872	True	NM_001898,NR_001279	chr20,chr20	-,+	CST1,CSTT	-1778,-233620
chr6:167794148-167794657	chr6	+	167794201	167794610	True	NM_004610,NM_031949	chr6,chr6	-,+	TCP10,TTLL2	3445,-55679
chr6:167794148-167794657	chr6	-	167587571	167587621	False	NM_005299,NM_001145121	chr6,chr6	-,+	GPR31,TCP10L2	-16252,-3541
chr2:1415391-1416493	chr2	+	1415573	1416420	True	NM_175721,NM_175719,NM_012293,NM_175722,NM_000547	chr2,chr2,chr2,chr2,chr2	+,+,-,+,+	TPO,TPO,PXDN,TPO,TPO	1759,812,331930,1759,812
chr1:51877866-51879804	chr1	+	51878178	51879182	True	NM_014372,NM_001159969	chr1,chr1	+,-	RNF11,EPS15	-176291,8671
chr22:26984976-26985361	chr22	+	26984998	26985324	True	NM_003595,NM_001886	chr22,chr22	-,+	TPST2,CRYBA4	815,32603
chr19:53496438-53496767	chr19	+	53496606	53496806	True	NM_152473,NR_003578	chr19,chr19	+,-	HERV-V1,ZNF702P	20537,28
chr5:64075431-64076544	chr5	+	64075909	64076592	True	NM_173829,NM_005869	chr5,chr5	-,+	SREK1IP1,CWC27	-11413,-11215
chr7:120598456-120599766	chr7	+	120598520	120599677	True	NM_198267,NM_019071,NM_012338	chr7,chr7,chr7	+,+,-	ING3,ING3,TSPAN12	-7754,-7754,-100343
chr21:37435925-37436145	chr21	+	37435971	37436163	True	NM_017438,NM_001007259,NM_001757	chr21,chr21,chr21	-,-,+	SETD4,SETD4,CBR1	-3155,-3360,6121
chr8:55367516-55367884	chr8	+	55367608	55367850	True	NM_022454,NM_006330	chr8,chr8	+,-	SOX17,LYPLA1	2644,-353031
chr7:157132286-157132613	chr7	+	157132594	157132664	True	NR_029689,NM_058246,NM_005494	chr7,chr7,chr7	-,+,+	MIR153-2,DNAJB6,DNAJB6	234502,-2934,-2935
chr16:58163598-58163884	chr16	+	58163682	58163846	True	NM_013242,NM_002428	chr16,chr16	-,+	C16orf80,MMP15	-386,-104451
chr16:8623002-8623270	chr16	+	8623012	8623266	True	NM_001146336,NM_024109	chr16,chr16	-,+	TMEM114,METTL22	-786,92260
chr7:57211776-57213443	chr7	+	57211912	57212913	True	NM_033273,NR_036102	chr7,chr7	-,+	ZNF479,MIR3147	-4341,259817
chr5:772500-774454	chr5	+	772521	774059	True	NM_001166260,NM_024786	chr5,chr5	+,-	TRIP13,ZDHHC11	118909,77092
chr2:159157264-159159017	chr2	+	159157274	159158872	True	NM_001005476,NM_138803	chr2,chr2	+,-	PKP4,CCDC148	154603,154443
chr7:44079780-44080057	chr7	+	44079797	44080081	True	NR_024116,NM_001014436,NM_001122956,NR_015401,NM_014063,NR_024416	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,+,+	RASA4P,DBNL,DBNL,FLJ35390,DBNL,FLJ35390	191,4157,4157,-1150,4157,-781
chr7:44079780-44080057	chr7	+	102134951	102135125	False	NM_006234,NM_152892	chr7,chr7	-,+	POLR2J,LRWD1	-15570,-29612
chr7:44079780-44080057	chr7	+	102330154	102330204	False	NM_032959,NM_001166339	chr7,chr7	-,+	POLR2J2,SPDYE2L	-17972,-39433
chr7:44079780-44080057	chr7	+	102234120	102234294	False	NM_001166339,NM_001097615	chr7,chr7	+,-	SPDYE2L,POLR2J3	-42492,-21052
chr5:10635891-10636251	chr5	+	10635922	10636240	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-71540,125197
chr1:33205089-33205614	chr1	+	33205193	33205259	True	NM_020888,NM_030786	chr1,chr1	+,-	KIAA1522,SYNC	2252,-36832
chr12:7818437-7819048	chr12	+	7818484	7818762	True	NM_001644,NM_199286	chr12,chr12	-,+	APOBEC1,DPPA3	0,45326
chr8:37368018-37369290	chr8	+	37368565	37369227	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	184073,236387
chr11:117017704-117019063	chr11	+	117018232	117019119	True	NM_001184747,NM_001184746,NM_001184748,NM_025164,NM_002572	chr11,chr11,chr11,chr11,chr11	+,+,+,-,+	PAFAH1B2,PAFAH1B2,PAFAH1B2,SIK3,PAFAH1B2	-3292,-3292,-3292,-49239,-3292
chrX:150153932-150154530	chrX	+	150153974	150154544	True	NM_005342,NM_134446	chrX,chrX	+,-	HMGB3,CD99L2	-2268,-86685
chr1:53926145-53926403	chr1	+	53926241	53926392	True	NR_002314,NM_033067	chr1,chr1	-,+	FLJ40434,DMRTB1	-20548,-1220
chr14:31503914-31504491	chr14	+	31504180	31504400	True	NM_001083893,NM_007077,NM_014574,NM_001128126	chr14,chr14,chr14,chr14	-,+,-,+	STRN3,AP4S1,STRN3,AP4S1	-8573,-9557,-8573,-9557
chr8:38590226-38590532	chr8	+	38590277	38590565	True	NM_001146216,NR_003129	chr8,chr8	+,-	TACC1,RNF5P1	-4632,-131502
chr16:14725546-14726037	chr16	+	14725670	14725799	True	NM_016561,NM_002582,NM_001134477	chr16,chr16,chr16	+,-,-	BFAR,PARN,PARN	868,-1546,-1550
chr19:36497693-36497962	chr19	+	36497699	36497982	True	NM_198867,NM_032878,NM_001039876,NM_001042631	chr19,chr19,chr19,chr19	-,-,-,+	ALKBH6,ALKBH6,C19orf46,SDHAF1	7209,7209,1740,-11660
chr13:20209117-20209381	chr13	+	20209128	20209353	True	NM_199254,NM_017520	chr13,chr13	-,+	TPTE2,MPHOSPH8	-98225,-1399
chr14:71264420-71265286	chr14	+	71264503	71264901	True	NM_033141,NM_014982	chr14,chr14	-,+	MAP3K9,PCNX	11037,109220
chr5:175341413-175341902	chr5	+	175341423	175341960	True	NM_032361,NM_001008220	chr5,chr5	-,+	THOC3,CPLX2	53648,-42973
chr5:175341413-175341902	chr5	-	177351544	177351806	False	NM_006261,NR_003615	chr5,chr5	-,+	PROP1,LOC728554	71487,-49333
chr19:10711944-10712383	chr19	+	10712051	10712238	True	NM_001145056,NM_005498	chr19,chr19	+,-	SLC44A2,AP1M2	882,-14060
chr3:170627037-170627858	chr3	+	170627155	170627641	True	NM_020390,NM_001185056	chr3,chr3	-,+	EIF5A2,CLDN11	-729,-488178
chr1:179848831-179850102	chr1	+	179848917	179849923	True	NM_015602,NM_145034,NM_001199260,NM_022347	chr1,chr1,chr1,chr1	+,-,-,-	TOR1AIP1,TOR1AIP2,TOR1AIP2,TOR1AIP2	1496,-1976,-1976,-1976
chr13:28178305-28179205	chr13	+	28178395	28179248	True	NM_153371,NM_152705	chr13,chr13	-,+	LNX2,POLR1D	15523,16754
chr1:117662785-117663165	chr1	+	117662790	117663202	True	NM_001145635,NR_030640,NM_025188	chr1,chr1,chr1	-,+,-	TRIM45,MIR942,TRIM45	1265,-25583,1265
chr1:241715900-241716842	chr1	+	241715913	241716621	True	NM_003679,NM_000143	chr1,chr1	+,-	KMO,FH	-20284,-32828
chr19:58513551-58513753	chr19	+	58513555	58513765	True	NR_036508,NM_025027	chr19,chr19	+,-	LOC100128398,ZNF606	496,999
chr1:24717605-24718311	chr1	+	24717605	24718323	True	NM_020448,NM_001199013	chr1,chr1	+,-	NIPAL3,C1orf201	23921,21992
chr22:38091246-38092483	chr22	+	38091438	38092366	True	NM_006498,NM_024313,NM_001039141	chr22,chr22,chr22	-,+,+	LGALS2,NOL12,TRIOBP	-115414,-9145,628
chr2:91845295-91845769	chr2	+	91845324	91845550	True	NR_003503,NR_027238	chr2,chr2	+,-	GGT8P,LOC654342	117817,2475
chr1:58713338-58715048	chr1	+	58713352	58714982	True	NM_021080,NR_034014	chr1,chr1	-,+	DAB1,LOC100131060	1279,535840
chr11:46614230-46615029	chr11	+	46614382	46614938	True	NM_017749,NM_001205120	chr11,chr11	-,+	AMBRA1,ATG13	-1468,23887
chr1:155208418-155208863	chr1	+	155208455	155208705	True	NM_000157,NM_001171812,NM_001171811,NM_198883,NM_001005742,NM_001005741	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,-	GBA,GBA,GBA,MTX1,GBA,GBA	2414,2411,5998,-30017,5998,5998
chr1:155208418-155208863	chr1	+	155187178	155187253	False	NM_002455,NM_007112,NM_198883	chr1,chr1,chr1	+,-,+	MTX1,THBS3,MTX1	-8740,-9488,-8740
chr10:18629926-18630159	chr10	+	18629956	18630178	True	NM_182543,NM_201590	chr10,chr10	-,+	NSUN6,CACNB2	310422,-402
chr13:26827738-26828042	chr13	+	26827798	26827969	True	NM_001260,NM_005977	chr13,chr13	+,-	CDK8,RNF6	786,-31290
chr7:99065308-99066132	chr7	+	99065829	99065995	True	NM_213603,NM_001198879,NM_001003714,NM_001039178,NM_001003713,NM_001013258,NM_004889	chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,-,-,-,-,+,-	ZNF789,ATP5J2-PTCD1,ATP5J2,ATP5J2,ATP5J2,ZNF789,ATP5J2	4519,-2005,-2005,-2005,-2005,4519,-2005
chr3:124447291-124447612	chr3	+	124447419	124447505	True	NM_002213,NR_033437,NR_033434,NM_000373	chr3,chr3,chr3,chr3	-,+,+,+	ITGB5,UMPS,UMPS,UMPS	158697,1707,1707,1707
chr1:180979148-180979528	chr1	+	180979158	180979342	True	NM_001194999,NM_005819	chr1,chr1	+,-	MR1,STX6	23218,12764
chr14:94595585-94595912	chr14	+	94595765	94595949	True	NM_032036,NM_005532	chr14,chr14	-,+	IFI27L2,IFI27	58,-18737
chr9:136933952-136934207	chr9	+	136933974	136934071	True	NM_007371,NR_015427	chr9,chr9	-,+	BRD3,NCRNA00094	-833,-43464
chr6:11045161-11045839	chr6	+	11045178	11045841	True	NM_017770,NM_001135575	chr6,chr6	-,+	ELOVL2,LOC221710	-554,48424
chr2:45168232-45168999	chr2	+	45168466	45168928	True	NM_005413,NM_016932	chr2,chr2	+,-	SIX3,SIX2	108,67664
chr7:136554680-136554950	chr7	+	136554720	136554960	True	NM_001006632,NM_001006630,NM_001006627,NM_001006631,NM_001006629,NM_001006628,NM_001006626,NM_000739,NM_002825	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,+,+,+,+,-	CHRM2,CHRM2,CHRM2,CHRM2,CHRM2,CHRM2,CHRM2,CHRM2,PTN	-939,-1372,-1372,-939,-787,-778,-902,-939,473636
chr3:156273096-156274699	chr3	+	156273192	156273992	True	NM_015508,NM_007107	chr3,chr3	+,-	TIPARP,SSR3	118212,-219
chr9:15551504-15552229	chr9	+	15551818	15552257	True	NM_173550,NM_033222	chr9,chr9	+,-	C9orf93,PSIP1	839,-40815
chrY:21635459-21637157	chrY	+	21635541	21637175	True	NR_002923,NM_001005852	chrY,chrY	-,+	BCORP1,CYorf15A	27914,92059
chr15:20771819-20773149	chr15	+	20772167	20772453	True	NM_001145004,NR_027411	chr15,chr15	-,+	GOLGA6L6,GOLGA8C	-25053,-4544
chr15:20771819-20773149	chr15	+	28628298	28628352	False	NM_004667,NR_033351,NR_033353	chr15,chr15,chr15	-,+,+	HERC2,GOLGA8F,GOLGA8G	-61003,-4565,-4565
chr15:20771819-20773149	chr15	-	28773574	28773628	False	NR_036443,NR_033351,NR_033353	chr15,chr15,chr15	+,-,-	HERC2P9,GOLGA8F,GOLGA8G	125959,4565,4565
chr15:20771819-20773149	chr15	-	22710948	22710998	False	NR_027407,NM_001001413	chr15,chr15	-,+	GOLGA8DP,GOLGA6L1	4780,25247
chr15:20771819-20773149	chr15	+	23439587	23439849	False	NR_002824,NR_033350	chr15,chr15	-,+	HERC2P2,GOLGA8E	-61328,-4568
chr1:2939257-2939461	chr1	+	2939272	2939496	True	NM_080431,NR_015440	chr1,chr1	+,-	ACTRT2,FLJ42875	-1277,44843
chr19:15751306-15752020	chr19	+	15751372	15752054	True	NM_000896,NM_001199208,NM_001199209,NR_033864	chr19,chr19,chr19,chr19	+,+,+,-	CYP4F3,CYP4F3,CYP4F3,CYP4F24P	238,238,238,138794
chr11:85446722-85447941	chr11	+	85447067	85447917	True	NM_206927,NM_206928,NM_032273	chr11,chr11,chr11	-,-,+	SYTL2,SYTL2,TMEM126A	-9556,-9556,-88155
chr15:85145002-85145275	chr15	+	85145104	85145167	True	NM_017894,NM_001007072,NM_181877,NR_003661	chr15,chr15,chr15,chr15	+,+,+,-	ZSCAN2,ZSCAN2,ZSCAN2,UBE2Q2P1	-911,-911,-911,-31078
chr11:121988997-121989769	chr11	+	121989200	121989561	True	NM_032873,NM_001001786	chr11,chr11	+,-	UBASH3B,BLID	536836,-2277
chr19:40850308-40851325	chr19	+	40850407	40851284	True	NM_012268,NM_001031696,NM_178830	chr19,chr19,chr19	+,+,-	PLD3,PLD3,C19orf47	3047,3047,3060
chr19:39264335-39265813	chr19	+	39264349	39265813	True	NM_002307,NM_001042507	chr19,chr19	-,+	LGALS7,LGALS7B	-192,14036
chr1:228762734-228762998	chr1	+	228762733	228762805	True	NR_037962,NM_033445	chr1,chr1	+,-	RHOU,HIST3H2A	17588,-117173
chr1:228762734-228762998	chr1	+	228753817	228753889	False	NR_037962,NM_033445	chr1,chr1	+,-	RHOU,HIST3H2A	26504,-108257
chr1:187340965-187341686	chr1	+	187340994	187341725	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-691435,-543013
chr6:152006561-152007593	chr6	+	152006609	152007487	True	NM_017909,NM_001122742	chr6,chr6	-,+	RMND1,ESR1	-233293,4143
chr19:16223519-16224302	chr19	+	16223600	16224152	True	NM_005370,NM_054113	chr19,chr19	+,-	RAB8A,CIB3	-1167,60184
chr1:32171297-32172150	chr1	+	32171508	32172132	True	NM_001856,NM_001525	chr1,chr1	-,+	COL16A1,HCRTR1	-1740,-88258
chr16:31225717-31225969	chr16	+	31225749	31225943	True	NM_001008274,NM_152901	chr16,chr16	+,-	TRIM72,PYDC1	-458,2502
chr13:35546931-35548257	chr13	+	35547208	35548306	True	NM_005584,NM_015678	chr13,chr13	-,+	MAB21L1,NBEA	502576,-30835
chr9:4118462-4118707	chr9	+	4118482	4118708	True	NR_026663,NM_152629	chr9,chr9	+,-	C9orf70,GLIS3	-219887,33525
chr2:11884490-11885319	chr2	+	11884489	11885339	True	NM_012344,NM_145693	chr2,chr2	-,+	NTSR2,LPIN1	-74160,1400
chr3:130731997-130732960	chr3	+	130732047	130732990	True	NM_145910,NM_014065	chr3,chr3	+,-	NEK11,ASTE1	12703,12707
chrY:14880530-14881884	chrY	+	14880641	14881656	True	NM_004654,NR_033667	chrY,chrY	+,-	USP9Y,GYG2P1	-67539,-347252
chr1:36918024-36919192	chr1	+	36918127	36919166	True	NM_145047,NM_024676,NM_206837	chr1,chr1,chr1	-,+,-	OSCP1,SH3D21,OSCP1	-2041,-145471,-2041
chr9:89700894-89702045	chr9	+	89701098	89702056	True	NR_036691,NM_001001709	chr9,chr9	-,+	LOC494127,C9orf170	-958,61502
chr16:58220618-58222346	chr16	+	58220691	58222382	True	NM_001142302,NM_001896	chr16,chr16	+,-	CCDC113,CSNK2A2	61457,9457
chr13:103425016-103425276	chr13	+	103425201	103425325	True	NM_001159596,NM_138779	chr13,chr13	+,-	BIVM,C13orf27	26073,874
chr20:33880457-33880713	chr20	+	33880580	33880714	True	NM_006690,NM_002212,NM_181466,NM_178468,NM_181468	chr20,chr20,chr20,chr20,chr20	+,-,-,-,-	MMP24,EIF6,EIF6,FAM83C,EIF6	-66092,-7986,-7986,-355,-8074
chr1:147142531-147142801	chr1	+	147142552	147142770	True	NM_004326,NM_016361	chr1,chr1	+,-	BCL9,ACP6	-129421,2
chr18:12418745-12419247	chr18	+	12418795	12418901	True	NM_006796,NM_006553	chr18,chr18	-,+	AFG3L2,SLMO1	-41520,-10951
chr20:25727674-25728433	chr20	+	25727706	25728312	True	NR_004846,NR_027061	chr20,chr20	+,-	LOC100134868,FAM182B	262122,48616
chrX:135962148-135962389	chrX	+	135962165	135962333	True	NM_001164803,NR_002735,NM_002139,NM_000074,NR_028477,NR_028476	chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,+,-,-	RBMX,SNORD61,RBMX,CD40LG,RBMX,RBMX	656,-735,656,-231880,656,656
chr5:159652144-159652900	chr5	+	159652703	159652835	True	NM_001445,NM_024565	chr5,chr5	+,-	FABP6,CCNJL	3601,86798
chr7:72684736-72685941	chr7	+	72685127	72685729	True	NR_002164,NR_003186	chr7,chr7	-,+	GTF2IRD2P1,NCF1B	11,-50505
chr7:72684736-72685941	chr7	+	74239492	74239652	False	NM_173537,NM_000265	chr7,chr7	-,+	GTF2IRD2,NCF1	28247,-51234
chr7:72684736-72685941	chr7	-	74536620	74536780	False	NM_030798,NM_001003795	chr7,chr7	-,+	WBSCR16,GTF2IRD2B	-46921,-28332
chr11:67120182-67120457	chr11	+	67120226	67120500	True	NM_021173,NR_024469	chr11,chr11	-,+	POLD4,LOC100130987	602,-34967
chr5:14142662-14142907	chr5	+	14142669	14142819	True	NM_001369,NM_007118	chr5,chr5	-,+	DNAH5,TRIO	-198080,1009
chr9:127020114-127020326	chr9	+	127020241	127020331	True	NM_002799,NM_014397,NM_001145001,NM_001166168,NM_001166167	chr9,chr9,chr9,chr9,chr9	-,+,+,+,+	PSMB7,NEK6,NEK6,NEK6,NEK6	157440,-96,-96,198,-407
chr19:52552918-52553848	chr19	+	52553276	52553868	True	NM_024840,NM_014650	chr19,chr19	+,-	ZNF613,ZNF432	-122648,-1203
chr5:40802906-40804176	chr5	+	40803075	40803807	True	NM_032587,NM_006251,NM_206907	chr5,chr5,chr5	+,-,-	CARD6,PRKAA1,PRKAA1	37602,-4778,-4778
chr15:83944170-83944732	chr15	+	83944263	83944771	True	NM_023003,NM_001717	chr15,chr15	+,-	TM6SF1,BNC1	-167991,8747
chr17:25319496-25320588	chr17	+	25319564	25320288	True	NM_015626,NM_000625	chr17,chr17	+,-	WSB1,NOS2	300817,807317
chr7:55770038-55770888	chr7	+	55770251	55770831	True	NM_182633,NR_003949	chr7,chr7	+,-	ZNF713,FKBP9L	209499,1480
chr7:55770038-55770888	chr7	-	33024681	33024736	False	NM_007270,NR_003500	chr7,chr7	+,-	FKBP9,RP9P	-27732,-41899
chr7:63664159-63664964	chr7	+	63664575	63664902	True	NM_001159524,NM_178558	chr7,chr7	+,-	ZNF735,ZNF680	2678,358653
chr19:54054189-54055692	chr19	+	54054401	54055660	True	NM_001079907,NR_002938	chr19,chr19	+,-	ZNF331,LOC284379	2900,51152
chr6:83072779-83073333	chr6	+	83072937	83073361	True	NM_001166392,NM_006670,NM_015525	chr6,chr6,chr6	+,+,-	TPBG,TPBG,IBTK	599,-65,-115489
chr3:120068388-120068698	chr3	+	120068464	120068694	True	NM_001099678,NM_001168331	chr3,chr3	-,+	LRRC58,NDUFB4	-278,246433
chr5:89691296-89691730	chr5	+	89691504	89691756	True	NM_006467,NM_004365	chr5,chr5	+,-	POLR3G,CETN3	78924,13903
chr7:64256454-64257136	chr7	+	64256658	64257143	True	NR_027661,NM_006524,NM_001160183,NR_027660,NR_002789	chr7,chr7,chr7,chr7,chr7	+,+,+,+,-	ZNF138,ZNF138,ZNF138,ZNF138,LOC168474	-1938,-1938,-1938,-1938,57086
chr13:99961455-99962576	chr13	+	99961711	99962210	True	NM_004951,NR_024013	chr13,chr13	-,+	GPR183,FKSG29	-1962,41463
chr15:92939279-92939814	chr15	+	92939284	92939634	True	NM_006011,NR_021493	chr15,chr15	+,-	ST8SIA2,LOC100144604	-2195,175909
chr17:7283840-7284314	chr17	+	7283843	7284199	True	NM_003985,NM_001201576	chr17,chr17	+,-	TNK1,PLSCR3	165,14013
chr2:131970692-131972422	chr2	+	131970858	131972425	True	NM_001009993,NM_001083538	chr2,chr2	-,+	FAM168B,POTEE	-119854,3498
chr2:131970692-131972422	chr2	-	130881604	130883171	False	NM_001099771,NR_033903	chr2,chr2	-,+	POTEF,LOC285103	3679,4024
chr2:27593134-27593394	chr2	+	27593140	27593437	True	NM_015636,NM_001201459,NM_001034116,NM_014748,NM_172195	chr2,chr2,chr2,chr2,chr2	-,-,-,+,-	EIF2B4,ZNF513,EIF2B4,SNX17,EIF2B4	-25,9924,-25,-11,-221
chrX:47509862-47510454	chrX	+	47510006	47510482	True	NM_005229,NR_028119,NM_004182,NR_027444,NM_153477,NM_001114123	chrX,chrX,chrX,chrX,chrX,chrX	-,+,-,+,-,-	ELK1,LOC100133957,UXT,LOC100133957,UXT,ELK1	-3,7749,8128,7769,8084,-3
chr5:754076-754870	chr5	+	754484	754614	True	NM_001166260,NM_007030	chr5,chr5	+,-	TRIP13,TPPP	138354,-60974
chr5:754076-754870	chr5	+	847038	847131	False	NM_001166260,NM_024786	chr5,chr5	+,-	TRIP13,ZDHHC11	45837,4059
chrX:57354626-57355870	chrX	+	57354999	57355751	True	NM_019003,NM_174912	chrX,chrX	-,+	SPIN2A,FAAH2	-190941,-41940
chr19:7731592-7732180	chr19	+	7731762	7732126	True	NM_020415,NM_174895,NM_001193374,NM_174918	chr19,chr19,chr19,chr19	+,-,+,+	RETN,PCP2,RETN,C19orf59	1845,-33192,1845,9816
chr11:73021163-73021908	chr11	+	73021279	73021855	True	NM_014824,NM_014786	chr11,chr11	-,+	FCHSD2,ARHGEF17	-168136,-1667
chr3:189542112-189542344	chr3	+	189542311	189542393	True	NR_030642,NM_018192	chr3,chr3	+,-	MIR944,LEPREL1	5317,296565
chr4:57371255-57371533	chr4	+	57371385	57371483	True	NM_002703,NM_206919	chr4,chr4	-,+	PPAT,ARL9	-69583,-67
chr9:839653-840425	chr9	+	840007	840425	True	NM_021951,NM_152569	chr9,chr9	+,-	DMRT1,C9orf66	1264,-624114
chr2:172377291-172378023	chr2	+	172377662	172378070	True	NM_024843,NM_001127383,NM_024770	chr2,chr2,chr2	+,+,-	CYBRD1,CYBRD1,METTL8	795,795,-86350
chr3:128445647-128446423	chr3	+	128445785	128446441	True	NM_002950,NM_004637	chr3,chr3	-,+	RPN1,RAB7A	-76066,-859
chr22:24824037-24825509	chr22	+	24824284	24825465	True	NR_028484,NM_000675	chr22,chr22	-,+	C22orf45,ADORA2A	65368,-805
chrX:13960083-13960435	chrX	+	13960083	13960178	True	NM_001001994,NM_003611	chrX,chrX	-,+	GPM6B,OFD1	-3252,-207309
chr19:663796-664202	chr19	+	663880	664040	True	NM_005860,NM_194460	chr19,chr19	+,-	FSTL3,RNF126	12348,-647
chr11:2172487-2172989	chr11	+	2172614	2172898	True	NR_028044,NM_000207,NM_001007139,NR_003512,NM_001185098,NM_001042376,NM_001185097	chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,-,-,-,-,-,-	IGF2AS,INS,IGF2,INS-IGF2,INS,INS-IGF2,INS	-10907,9591,-1781,9591,9591,9591,9591
chrX:107978934-107979217	chrX	+	107979006	107979258	True	NM_033380,NM_003604	chrX,chrX	+,-	COL4A5,IRS4	-295903,399
chr1:166571697-166572026	chr1	+	166571707	166571940	True	NM_053053,NR_002925	chr1,chr1	-,+	TADA1,FMO9P	273779,1212
chr2:12859077-12859570	chr2	+	12859084	12859492	True	NR_027303,NM_021643,NR_036226	chr2,chr2,chr2	+,+,-	TRIB2,TRIB2,MIR4262	-2138,-2138,-881972
chr7:157129478-157129819	chr7	+	157129597	157129861	True	NR_029689,NM_058246,NM_005494	chr7,chr7,chr7	-,+,+	MIR153-2,DNAJB6,DNAJB6	237303,5,4
chr12:109915603-109916440	chr12	+	109915778	109916227	True	NM_183415,NM_031954,NM_130466	chr12,chr12,chr12	+,-,+	UBE3B,KCTD10,UBE3B	-390,-623,-390
chr1:159927949-159929353	chr1	+	159927980	159929327	True	NM_033438,NM_001146172,NM_001146173,NM_004983	chr1,chr1,chr1,chr1	-,-,-,+	SLAMF9,SLAMF9,SLAMF9,KCNJ9	-3936,-3936,-3936,122032
chr17:71189564-71189774	chr17	+	71189695	71189819	True	NM_018714,NM_001098832	chr17,chr17	+,-	COG1,FAM104A	-573,38764
chr4:71596506-71596913	chr4	+	71596520	71596722	True	NM_144646,NM_014961,NM_001037442	chr4,chr4,chr4	-,+,+	IGJ,RUFY3,RUFY3	-64172,-8875,-8875
chr5:85910748-85911739	chr5	+	85911084	85911657	True	NR_036243,NM_001867,NR_037402	chr5,chr5,chr5	-,+,+	MIR4280,COX7C,MIR3607	499165,2126,4656
chr12:52887261-52888962	chr12	+	52887261	52888975	True	NM_002284,NM_005554	chr12,chr12	+,-	KRT86,KRT6A	-191665,-80
chr12:33593629-33594329	chr12	+	33593803	33594351	True	NM_198992,NM_032834	chr12,chr12	-,+	SYT10,ALG10	-1049,580864
chr3:52916106-52917224	chr3	+	52916338	52917267	True	NM_001198974,NM_002217	chr3,chr3	-,+	TMEM110-MUSTN1,ITIH3	14386,-87607
chr15:41838556-41839979	chr15	+	41838759	41839328	True	NM_015540,NM_006293	chr15,chr15	-,+	RPAP1,TYRO3	-2295,11891
chr1:33547049-33547398	chr1	+	33547317	33547415	True	NR_037592,NM_052998	chr1,chr1	-,+	AK2,ADC	-44805,-654
chr4:152021097-152021535	chr4	+	152021116	152021552	True	NR_000007,NM_001006,NM_001128924	chr4,chr4,chr4	+,+,-	SNORD73A,RPS3A,SH3D19	3426,-413,75208
chr7:995019-996485	chr7	+	995105	996004	True	NM_006869,NM_017781	chr7,chr7	-,+	ADAP1,CYP2W1	-816,26830
chr15:63477805-63479543	chr15	+	63478165	63479208	True	NM_016530,NM_015920	chr15,chr15	+,-	RAB8B,RPS27L	2519,-28424
chr12:117539197-117540301	chr12	+	117539202	117540262	True	NM_001168325,NM_153348,NM_017899,NR_031766	chr12,chr12,chr12,chr12	-,+,-,-	TESC,FBXW8,TESC,TESC	-1951,-190492,-1951,-1951
chr3:157261186-157261436	chr3	+	157261260	157261396	True	NR_024016,NM_001130001,NM_001167916,NM_001099777,NM_001130002	chr3,chr3,chr3,chr3,chr3	+,+,-,+,+	C3orf55,C3orf55,VEPH1,C3orf55,C3orf55	-152,-152,-39845,-152,-152
chr18:76862104-76863993	chr18	+	76862423	76864022	True	NM_198531,NM_001146343	chr18,chr18	+,-	ATP9B,PQLC1	-33077,847681
chr16:79795176-79795524	chr16	+	79795222	79795514	True	NM_005360,NM_130897	chr16,chr16	-,+	MAF,DYNLRB2	-160600,779339
chr6:6320432-6320708	chr6	+	6320474	6320646	True	NM_000129,NM_004271	chr6,chr6	-,+	F13A1,LY86	328,268287
chr6:56942729-56944490	chr6	+	56942905	56944131	True	NM_001031623,NM_183227	chr6,chr6	+,-	ZNF451,RAB23	10696,142180
chr4:74588134-74589835	chr4	+	74588135	74589815	True	NM_000584,NM_201431	chr4,chr4	+,-	IL8,RASSF6	16407,-101795
chr2:64879017-64880274	chr2	+	64879361	64880320	True	NM_014755,NR_034023	chr2,chr2	-,+	SERTAD2,LOC339807	777,-44966
chrX:47234506-47236386	chrX	+	47234739	47236139	True	NM_003446,NM_007130	chrX,chrX	+,-	ZNF157,ZNF41	-4798,106267
chr7:149158170-149158916	chr7	+	149158227	149158711	True	NM_015694,NR_036573	chr7,chr7	-,+	ZNF777,LOC155060	-174,-175908
chr16:73083610-73083899	chr16	+	73083640	73083948	True	NM_006885,NM_001164766,NR_027756	chr16,chr16,chr16	-,-,+	ZFHX3,ZFHX3,HTA	-1366,8636,42299
chr2:176993084-176993581	chr2	+	176993247	176993559	True	NM_014213,NM_001080458,NM_001199747,NM_001199746,NM_019558	chr2,chr2,chr2,chr2,chr2	+,-,+,+,+	HOXD9,EVX2,HOXD8,HOXD8,HOXD8	-5885,-44557,862,908,908
chr17:48245437-48245848	chr17	+	48245550	48245886	True	NR_024192,NR_024193,NM_001135697,NM_000023	chr17,chr17,chr17,chr17	-,-,+,+	HILS1,HILS1,SGCA,SGCA	4001,4001,-2235,-2235
chr11:8952470-8953706	chr11	+	8952477	8953643	True	NM_020643,NM_182901	chr11,chr11	-,+	C11orf16,C11orf17	960,-19726
chr8:142014753-142016129	chr8	+	142014957	142015936	True	NM_153831,NM_005607,NM_014957,NM_001199649	chr8,chr8,chr8,chr8	-,-,+,-	PTK2,PTK2,DENND3,PTK2	-3545,-3545,122783,-3545
chr7:23636734-23636992	chr7	+	23636764	23636894	True	NM_138771,NR_002711	chr7,chr7	+,-	CCDC126,CLK2P	103,-10618
chr16:29755828-29757067	chr16	+	29755984	29757064	True	NM_175900,NM_152338	chr16,chr16	-,+	C16orf54,ZG16	326,32496
chr1:231551684-231552043	chr1	+	231552023	231552098	True	NM_032018,NM_022051	chr1,chr1	+,-	C1orf124,EGLN1	-78400,8751
chr2:25389062-25390364	chr2	+	25389204	25390356	True	NM_001035256,NM_000939,NM_014971	chr2,chr2,chr2	-,-,+	POMC,POMC,EFR3B	1253,1253,-124282
chr20:57875873-57876107	chr20	+	57875878	57876138	True	NR_037930,NM_207033,NM_207032,NM_000114,NM_207034	chr20,chr20,chr20,chr20,chr20	-,+,+,+,+	SLMO2-ATP5E,EDN3,EDN3,EDN3,EDN3	-257977,-430,-430,-430,-430
chr3:150323415-150324674	chr3	+	150323437	150324247	True	NM_016275,NM_014445	chr3,chr3	+,-	SELT,SERP1	-2429,-59009
chr1:235535195-235536093	chr1	+	235535388	235535951	True	NM_001079515,NM_031371,NM_003193	chr1,chr1,chr1	+,-,+	TBCE,ARID4B,TBCE	-4711,-43856,-4711
chr6:27806662-27807010	chr6	+	27806799	27807025	True	NM_003510,NM_003520,NM_003541	chr6,chr6,chr6	-,+,-	HIST1H2AK,HIST1H2BN,HIST1H4K	-682,-410,-7494
chr21:44752983-44753260	chr21	+	44753135	44753275	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	116628,93777
chr3:122137351-122137936	chr3	+	122137585	122137784	True	NM_014367,NM_019069	chr3,chr3	+,-	FAM162A,WDR5B	-34613,-2703
chr20:44659668-44660237	chr20	+	44659739	44660255	True	NM_020967,NM_001134771,NM_020708	chr20,chr20,chr20	-,+,+	NCOA5,SLC12A5,SLC12A5	58375,-9461,-1969
chr4:618544-618775	chr4	+	618624	618758	True	NM_000283,NM_007100,NM_001145291	chr4,chr4,chr4	+,-,+	PDE6B,ATP5I,PDE6B	604,49419,604
chr1:9144057-9144629	chr1	+	9144245	9144630	True	NM_001215,NR_024180	chr1,chr1	+,-	CA6,SLC2A5	-138381,3931
chr15:74525445-74525772	chr15	+	74525467	74525751	True	NM_001199040,NM_025055	chr15,chr15	-,+	STRA6,CCDC33	-23421,2915
chr16:79717175-79718027	chr16	+	79717219	79718078	True	NM_005360,NM_130897	chr16,chr16	-,+	MAF,DYNLRB2	-82597,856775
chr12:133001812-133002016	chr12	+	133001827	133002053	True	NM_001142641,NM_001122636	chr12,chr12	+,-	FBRSL1,GALNT9	65103,-95922
chr4:187124574-187124873	chr4	+	187124675	187124915	True	NM_207352,NM_021069	chr4,chr4	+,-	CYP4V2,SORBS2	-12052,-246805
chr17:48173079-48173300	chr17	+	48173118	48173274	True	NM_001199899,NM_001199898,NM_174920,NM_002611,NM_001199900	chr17,chr17,chr17,chr17,chr17	+,+,-,+,+	PDK2,PDK2,SAMD14,PDK2,PDK2	-110,-1068,33943,-530,-530
chr17:75448641-75448896	chr17	+	75448702	75448849	True	NM_001113496,NR_036200	chr17,chr17	+,-	SEPT9,MIR4316	-2140,-55566
chrX:118990962-118992326	chrX	+	118991545	118992108	True	NM_004541,NM_080632,NM_023010	chrX,chrX,chrX	+,-,-	NDUFA1,UPF3B,UPF3B	13625,-4554,-4554
chr17:33448837-33449286	chr17	+	33448847	33448943	True	NM_002878,NR_037711,NR_037712,NR_037714,NM_133629,NM_017559,NM_001142571	chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,+,-	RAD51L3,RAD51L3,RAD51L3,RAD51L3-RFFL,RAD51L3,FNDC8,RAD51L3	-1959,-1959,-1959,-306,-1959,-267,-1959
chr21:47883712-47884160	chr21	+	47883907	47884037	True	NM_206889,NM_001146114,NM_001146115,NM_001146116,NM_206890,NM_206891,NM_015151,NM_058180	chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21	+,+,+,+,+,+,+,-	DIP2A,DIP2A,DIP2A,DIP2A,DIP2A,DIP2A,DIP2A,C21orf58	-5097,-5097,-5097,-5097,-5097,-5097,-5097,-140122
chr19:14542664-14542899	chr19	+	14542756	14542836	True	NM_005804,NM_213560,NM_002741	chr19,chr19,chr19	-,+,+	DDX39A,PKN1,PKN1	-12561,8249,1329
chr7:150692471-150693553	chr7	+	150692471	150693558	True	NM_172056,NM_000603,NM_001160110,NM_001160111,NM_001160109	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	KCNH2,NOS3,NOS3,NOS3,NOS3	-17069,-4378,-1630,-1630,-1630
chr3:195388216-195389034	chr3	+	195388284	195389081	True	NM_001647,NR_003265	chr3,chr3	-,+	APOD,SDHAP2	-77208,-3425
chr3:195388216-195389034	chr3	-	195713020	195713817	False	NR_034088,NR_003264	chr3,chr3	+,-	LOC401109,SDHAP1	155689,3383
chr3:195388216-195389034	chr3	-	197350613	197351056	False	NR_003266,NM_001011537	chr3,chr3	-,+	LOC220729,FYTTD1	3746,125367
chr8:18066318-18067414	chr8	+	18066371	18067367	True	NM_001160176,NM_001160175,NM_001160172,NM_001160173,NM_001160170,NM_001160171,NM_000662,NM_004315	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	+,+,+,+,+,+,+,-	NAT1,NAT1,NAT1,NAT1,NAT1,NAT1,NAT1,ASAH1	250,250,250,250,250,250,250,-123864
chr19:38757667-38757953	chr19	+	38757679	38757993	True	NM_021102,NM_033256,NM_001166103	chr19,chr19,chr19	+,-,+	SPINT2,PPP1R14A,SPINT2	-2632,-10507,-2632
chr20:62166614-62166891	chr20	+	62166784	62166856	True	NM_005975,NM_024299	chr20,chr20	-,+	PTK6,PPDPF	1901,-14702
chr7:1271923-1272193	chr7	+	1271965	1272072	True	NM_001080461,NM_182491	chr7,chr7	+,-	UNCX,ZFAND2A	581,-72110
chr2:74208870-74209522	chr2	+	74209131	74209533	True	NM_080918,NM_001035505	chr2,chr2	+,-	DGUOK,BOLA3	-55229,165556
chr2:95787459-95787671	chr2	+	95787577	95787657	True	NM_031902,NM_001017396	chr2,chr2	-,+	MRPS5,ZNF2	147,43525
chr4:147735800-147736482	chr4	+	147735993	147736440	True	NM_004575,NM_031956	chr4,chr4	+,-	POU4F2,TTC29	-175999,130657
chr16:28610398-28610739	chr16	+	28610443	28610659	True	NM_138414,NM_177528,NM_001054	chr16,chr16,chr16	+,-,-	CCDC101,SULT1A2,SULT1A2	-45245,-2642,-2052
chr16:28610398-28610739	chr16	+	28623437	28623653	False	NM_177529,NM_138414,NM_001055,NM_177530,NM_177534	chr16,chr16,chr16,chr16,chr16	-,+,-,-,-	SULT1A1,CCDC101,SULT1A1,SULT1A1,SULT1A1	-2080,-58239,-2080,-2788,-2788
chr3:118792678-118793553	chr3	+	118792798	118793344	True	NM_152539,NM_001015887	chr3,chr3	+,-	C3orf30,IGSF11	71652,-39122
chr22:41810040-41810512	chr22	+	41810140	41810560	True	NM_003216,NM_016272	chr22,chr22	+,-	TEF,TOB2	-32228,32517
chr17:39659634-39659947	chr17	+	39659660	39659989	True	NM_005801,NM_002274,NM_153490	chr17,chr17,chr17	+,-,-	EIF1,KRT13,KRT13	185137,1926,1926
chr7:120591122-120592103	chr7	+	120591229	120592111	True	NM_198267,NM_019071,NM_012338	chr7,chr7,chr7	+,+,-	ING3,ING3,TSPAN12	-463,-463,-93052
chr15:82825334-82826309	chr15	+	82825342	82826008	True	NM_001199057,NR_033579,NM_001021	chr15,chr15,chr15	-,+,-	LOC100505503,LOC440297,RPS17	-477,-71951,-477
chr15:82825334-82826309	chr15	+	83209684	83210350	False	NM_001199057,NR_033579,NM_001021	chr15,chr15,chr15	-,+,-	LOC100505503,LOC440297,RPS17	-476,-79707,-476
chr12:123922578-123923374	chr12	+	123922681	123922872	True	NM_145058,NM_022717	chr12,chr12	-,+	RILPL2,SNRNP35	-1417,19778
chr9:131535165-131536148	chr9	+	131535359	131535842	True	NM_006336,NM_018201	chr9,chr9	-,+	ZER1,TBC1D13	-1161,13667
chr11:63378670-63379330	chr11	+	63378770	63379132	True	NM_006054,NM_001128203,NM_007069	chr11,chr11,chr11	+,-,-	RTN3,PLA2G16,PLA2G16	69789,2869,2837
chr11:9335853-9336092	chr11	+	9335934	9336138	True	NM_006391,NM_001165030,NM_015012,NR_028491	chr11,chr11,chr11,chr11	+,-,-,-	IPO7,TMEM41B,TMEM41B,TMEM41B	70030,208,208,208
chrX:55209396-55210295	chrX	+	55209435	55210140	True	NM_130467,NM_001190708	chrX,chrX	+,-	PAGE5,MTRNR2L10	36650,-491
chr1:28560815-28561250	chr1	+	28560944	28561154	True	NM_178191,NM_016311,NM_014280,NM_178190	chr1,chr1,chr1,chr1	+,+,-,+	ATPIF1,ATPIF1,DNAJC8,ATPIF1	1447,1447,-1402,1447
chr9:138797635-138798468	chr9	+	138797675	138798466	True	NM_015447,NM_020822	chr9,chr9	-,+	CAMSAP1,KCNT1	589,-203703
chr19:4063258-4063502	chr19	+	4063278	4063468	True	NM_015897,NM_015898	chr19,chr19	+,-	PIAS4,ZBTB7A	-55580,3398
chr21:28216278-28216570	chr21	+	28216329	28216593	True	NM_006988,NR_024357	chr21,chr21	-,+	ADAMTS1,NCRNA00113	1185,878104
chr19:13214410-13214730	chr19	+	13214430	13214738	True	NM_005583,NM_052876	chr19,chr19	-,+	LYL1,NACC1	-456,14370
chr15:22555906-22556349	chr15	+	22556050	22556352	True	NR_027407,NR_033735	chr15,chr15	-,+	GOLGA8DP,REREP3	159426,-9546
chr19:37150721-37151210	chr19	+	37150723	37151036	True	NM_153257,NM_152603	chr19,chr19	-,+	ZNF461,ZNF567	6754,29265
chr1:23953426-23953651	chr1	+	23953545	23953613	True	NM_002167,NR_027042	chr1,chr1	-,+	ID3,MDS2	-67223,210
chr15:80986737-80986951	chr15	+	80986739	80986949	True	NM_021214,NR_030393	chr15,chr15	+,-	FAM108C1,MIR549	702,147515
chr5:10564828-10565035	chr5	+	10564902	10565084	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-518,196353
chr3:9595665-9596037	chr3	+	9595786	9595932	True	NM_198560,NM_001077525	chr3,chr3	-,+	LHFPL4,MTMR14	-300,95184
chr12:8089620-8090019	chr12	+	8089817	8089985	True	NM_006931,NM_018416	chr12,chr12	-,+	SLC2A3,FOXJ2	-925,95373
chr6:144356572-144357695	chr6	+	144356809	144357685	True	NR_002768,NM_003764	chr6,chr6	-,+	HYMAI,STX11	-26942,113968
chrX:89365819-89367327	chrY	+	3549621	3550280	False	NM_003140,NM_139214	chrY,chrY	-,+	SRY,TGIF2LY	-893829,-102546
chrX:89365819-89367327	chrX	+	89366110	89367134	True	NM_138960,NM_004538	chrX,chrX	+,-	TGIF2LX,NAP1L3	-189228,3561598
chr17:19028449-19028738	chr17	+	19028452	19028711	True	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	2070,-78116
chr17:19028449-19028738	chr17	-	18952458	18952717	False	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	78064,-2122
chr2:10218908-10219387	chr2	+	10218932	10219221	True	NM_001177718,NM_001037160	chr2,chr2	+,-	KLF11,CYS1	-34618,1368
chr7:26906142-26908136	chr7	+	26906348	26908174	True	NM_003930,NM_001145531	chr7,chr7	-,+	SKAP2,C7orf71	-2007,-228917
chr5:130506741-130507346	chr5	+	130506928	130507358	True	NM_181705,NR_024611,NR_024610,NM_005340	chr5,chr5,chr5,chr5	+,-,-,-	LYRM7,HINT1,HINT1,HINT1	-339,-5902,-5894,-5894
chr16:47176967-47177188	chr16	+	47177019	47177187	True	NM_001142466,NM_018092,NM_001201477	chr16,chr16,chr16	+,-,-	GPT2,NETO2,NETO2	-257968,799,799
chr1:204122283-204122718	chr1	+	204122283	204122424	True	NM_018208,NM_005686	chr1,chr1	-,+	ETNK2,SOX13	-976,-80088
chr9:34456320-34456759	chr9	+	34456324	34456746	True	NM_001184941,NM_001184940,NM_001184943,NM_001184942,NM_001184945,NM_012144,NM_147202	chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,-,-,-,-,+,-	C9orf25,C9orf25,C9orf25,C9orf25,C9orf25,DNAI1,C9orf25	1872,1872,1872,1872,1872,2064,1872
chr14:77277552-77278516	chr14	+	77277593	77278406	True	NM_015305,NM_194287	chr14,chr14	-,+	ANGEL1,C14orf166B	928,14318
chr1:178475911-178477622	chr1	+	178475972	178477663	True	NM_001170724,NM_032126,NM_001170722,NM_001170723,NM_004673	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	C1orf49,C1orf49,C1orf49,C1orf49,ANGPTL1	4548,4548,4548,4548,362602
chr7:14773957-14774657	chr7	+	14773961	14774698	True	NM_001195280,NM_004080	chr7,chr7	+,-	LOC100506049,DGKB	1791806,106427
chr1:116528489-116529877	chr1	+	116528754	116529665	True	NM_018420,NM_005599	chr1,chr1	+,-	SLC22A15,NHLH2	-9693,-145007
chr3:197682453-197684419	chr3	+	197682453	197684249	True	NR_026787,NR_026786,NM_001134435,NM_032263,NM_000996,NM_001136049,NM_033029	chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,-,-,+,+,+	LMLN,LMLN,IQCG,IQCG,RPL35A,LMLN,LMLN	2821,2821,-5657,2687,-5454,2821,2821
chr6:157099973-157100175	chr6	+	157100036	157100102	True	NM_020732,NM_018452,NM_017519	chr6,chr6,chr6	+,-,+	ARID1B,C6orf35,ARID1B	-1023,645201,-1023
chrX:85402261-85402959	chrX	+	85402350	85402984	True	NM_053281,NM_001145414,NM_001139514	chrX,chrX,chrX	+,-,+	DACH2,CHM,DACH2	470,-99784,470
chr14:20111286-20112114	chr22	+	16379210	16379606	False	NM_001005239,NR_001591	chr22,chr22	-,+	OR11H1,psiTPTE22	70258,703194
chr14:20111286-20112114	chr2	+	130712810	130712870	True	NR_026740,NM_032144	chr2,chr2	-,+	LOC389033,RAB6C	-20920,24364
chr14:20111286-20112114	chr14	+	20111574	20111970	False	NM_001197287,NM_172194	chr14,chr14	-,+	OR11H2,OR4Q3	70581,103616
chr11:2193927-2194400	chr11	+	2194152	2194400	True	NM_199293,NM_199292,NR_028044,NM_000360	chr11,chr11,chr11,chr11	-,-,+,-	TH,TH,IGF2AS,TH	-1117,-1117,-32445,-1117
chr6:42860625-42861043	chr6	+	42860862	42861023	True	NM_001008739,NM_198486	chr6,chr6	-,+	C6orf226,RPL7L1	-2308,-13255
chr10:3109359-3109586	chr10	+	3109409	3109497	True	NM_002627,NM_014889	chr10,chr10	+,-	PFKP,PITRM1	254,105556
chr14:103801435-103802841	chr14	+	103801514	103802462	True	NM_183004,NR_002964,NR_033938,NM_001969	chr14,chr14,chr14,chr14	+,+,-,+	EIF5,SNORA28,LOC100131366,EIF5	-329,1723,-146149,-1072
chr19:46630785-46632001	chr19	+	46630823	46631709	True	NM_001002915,NM_207393	chr19,chr19	+,-	IGFL2,IGFL3	19329,-2892
chr17:77753780-77755046	chr17	+	77753830	77754637	True	NM_005189,NM_020649,NM_032647	chr17,chr17,chr17	+,-,+	CBX2,CBX8,CBX2	-1904,16329,-1904
chr13:101324550-101325039	chr13	+	101324556	101324674	True	NM_032813,NM_001178004,NM_001079669	chr13,chr13,chr13	-,+,-	TMTC4,PCCA,TMTC4	2479,-583338,2479
chr21:43769906-43770496	chr21	+	43770030	43770320	True	NM_005423,NM_001001895	chr21,chr21	-,+	TFF2,UBASH3A	938,53698
chr8:99129185-99129508	chr8	+	99129223	99129549	True	NM_015029,NM_001145861,NM_001145860,NM_005836	chr8,chr8,chr8,chr8	+,+,+,-	POP1,POP1,POP1,HRSP12	518,-29,-29,-81
chr10:11075379-11076018	chr10	+	11075537	11076030	True	NR_024411,NM_006561	chr10,chr10	-,+	LOC254312,CELF2	-81411,-15695
chrX:69672750-69673630	chrX	+	69672789	69673416	True	NM_020730,NM_016484,NM_021120,NM_001166278	chrX,chrX,chrX,chrX	+,-,+,+	DLG3,PDZD11,DLG3,DLG3	-692,-162991,-8142,1529
chr18:56334418-56335147	chr18	+	56334633	56335045	True	NM_006785,NM_052947,NM_173844	chr18,chr18,chr18	+,-,+	MALT1,ALPK2,MALT1	3572,-38444,3572
chr4:120988139-120988585	chr4	+	120988148	120988500	True	NM_002358,NR_037630	chr4,chr4	-,+	MAD2L1,LOC645513	-135,-612261
chr1:211567371-211568389	chr1	+	211567482	211568387	True	NM_001164688,NR_026761	chr1,chr1	-,+	RD3,C1orf97	97922,-11450
chr8:26242589-26243041	chr8	+	26242594	26242791	True	NM_007257,NM_004331	chr8,chr8	-,+	PNMA2,BNIP3L	128749,-2122
chr20:17544115-17545324	chr20	+	17544595	17545209	True	NM_001011546,NM_001161705,NM_006870	chr20,chr20,chr20	+,-,+	DSTN,BFSP1,DSTN	5389,-4990,5389
chr8:81211045-81211898	chr8	+	81211172	81211487	True	NM_005079,NM_001105539	chr8,chr8	-,+	TPD52,ZBTB10	-127336,186960
chr8:127792227-127793216	chr8	+	127792372	127793235	True	NM_001159542,NM_174911	chr8,chr8	+,-	POU5F1B,FAM84B	634621,-221661
chr3:36944779-36945605	chr3	+	36944867	36945423	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	41187,89417
chr9:78501386-78502901	chr9	+	78501591	78502696	True	NM_006200,NR_031679,NM_001190482	chr9,chr9,chr9	+,-,+	PCSK5,MIR548H3,PCSK5	2863,-162847,2863
chr7:99160268-99161510	chr7	+	99160461	99161522	True	NM_001009958,NM_145111,NM_001009960,NM_138494,NM_001085368,NM_001083956,NM_024061,NM_001085367,NM_001085366	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,-,+,+,+,+,+,+,+	ZNF655,FAM200A,ZNF655,ZNF655,ZNF655,ZNF655,ZNF655,ZNF655,ZNF655	-4070,-10704,-4070,-4473,-4070,-4473,-4473,-4070,-4473
chr22:44423018-44423248	chr22	+	44423100	44423294	True	NM_013327,NM_138814	chr22,chr22	+,-	PARVB,PNPLA5	-2983,-135207
chr20:44883752-44885354	chr20	+	44883995	44885020	True	NM_152854,NM_021248	chr20,chr20	+,-	CD40,CDH22	-137140,-3661
chr13:100151298-100151965	chr13	+	100151394	100151867	True	NM_004951,NM_004800	chr13,chr13	-,+	GPR183,TM9SF2	-191645,1860
chr9:19127877-19128405	chr9	+	19127900	19128230	True	NM_001122,NR_038064,NM_006570	chr9,chr9,chr9	-,-,+	PLIN2,PLIN2,RRAGA	-296,-296,-78586
chr3:190963778-190964114	chr3	+	190963983	190964087	True	NM_198184,NM_198152	chr3,chr3	+,-	OSTN,UTS2D	-33712,84288
chr15:66790421-66791978	chr15	+	66790495	66791679	True	NM_006049,NM_000968,NR_003105,NR_002440,NR_002441,NR_002442,NR_002443,NM_017975	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,+,-,-,-,-,+	SNAPC5,RPL4,ZWILCH,SNORD16,SNORD18A,SNORD18B,SNORD18C,ZWILCH	-349,5563,5751,3627,4031,2808,2035,5751
chr3:113466388-113466995	chr3	+	113466508	113466948	True	NM_001690,NM_025146	chr3,chr3	+,-	ATP6V1A,NAA50	-693,-1388
chr22:30234343-30235514	chr22	+	30234463	30235299	True	NM_021090,NM_032204	chr22,chr22	+,-	MTMR3,ASCC2	43858,-209
chr3:39853292-39853498	chr3	+	39853322	39853525	True	NR_033965,NM_015460	chr3,chr3	-,+	FLJ33065,MYRIP	497715,-2083
chr16:839703-840091	chr16	+	839729	840041	True	NM_001025190,NM_022092,NM_058192	chr16,chr16,chr16	-,+,-	MSLNL,CHTF18,RPUSD1	-6803,-1158,-1346
chr13:100633414-100633661	chr13	+	100633465	100633581	True	NM_033132,NM_007129	chr13,chr13	-,+	ZIC5,ZIC2	-9287,444
chr12:56710650-56710863	chr12	+	56710682	56710901	True	NM_014255,NM_001190991,NM_016584	chr12,chr12,chr12	-,-,+	CNPY2,CNPY2,IL23A	-554,-554,21761
chr1:20395237-20395438	chr1	+	20395307	20395481	True	NM_000929,NM_012400	chr1,chr1	+,-	PLA2G5,PLA2G2D	1219,50577
chr6:152949473-152950430	chr6	+	152949556	152950340	True	NM_025107,NM_182961,NM_033071	chr6,chr6,chr6	+,-,-	MYCT1,SYNE1,SYNE1	68689,8244,7696
chr2:242088854-242089077	chr2	+	242088871	242089031	True	NM_015148,NM_002712	chr2,chr2	-,+	PASK,PPP1R7	-3,870
chr17:38023912-38024235	chr17	+	38023952	38024050	True	NM_183229,NM_183228,NM_198844,NM_183232,NM_199321,NM_183231,NM_012481,NM_183230	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,-,+,-,-,-	IKZF3,IKZF3,ZPBP2,IKZF3,ZPBP2,IKZF3,IKZF3,IKZF3	-3511,-3511,404,-3511,404,-3511,-3511,-3511
chr21:27540153-27541276	chr21	+	27540191	27541167	True	NM_201413,NM_000484,NM_001204302,NM_201414,NM_001204301,NM_001136129,NM_002040,NM_001136131,NM_001136130,NM_001204303	chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21	-,-,-,-,-,-,+,-,-,-	APP,APP,APP,APP,APP,APP,GABPA,APP,APP,APP	2021,2021,2021,2021,2021,2021,-432914,2329,2021,2021
chr12:6676518-6677027	chr12	+	6676551	6677011	True	NM_002046,NM_001033714,NM_006170	chr12,chr12,chr12	+,-,-	GAPDH,NOP2,NOP2	-32945,519,519
chr9:95644235-95644704	chr9	+	95644564	95644686	True	NM_001083536,NM_001007101,NM_031486	chr9,chr9,chr9	+,-,-	FGD3,ZNF484,ZNF484	64914,-4294,-4274
chr1:172719035-172720720	chr1	+	172719103	172720733	True	NM_000639,NM_005092	chr1,chr1	+,-	FASLG,TNFSF18	-90971,299422
chr3:194349784-194350454	chr3	+	194349903	194350377	True	NM_001011655,NM_001166305,NM_153690,NM_138399,NM_001166306	chr3,chr3,chr3,chr3,chr3	-,-,+,-,-	TMEM44,TMEM44,FAM43A,TMEM44,TMEM44	3823,3823,56244,3823,3823
chr20:18036780-18037056	chr20	+	18036794	18037002	True	NM_021220,NM_001164811	chr20,chr20	-,+	OVOL2,PET117	1569,81496
chr16:85622389-85622684	chr16	+	85622420	85622614	True	NM_001134473,NM_016095	chr16,chr16	+,-	KIAA0182,GINS2	22414,100024
chr18:39539674-39540865	chr18	+	39539800	39540618	True	NM_002647,NR_002838	chr18,chr18	+,-	PIK3C3,KC6	-4662,-439239
chr16:75531171-75532385	chr16	+	75531227	75532313	True	NM_007285,NM_021615	chr16,chr16	+,-	GABARAPL2,CHST6	67935,-2301
chr1:228396954-228397168	chr1	+	228397012	228397180	True	NM_181465,NM_001098623,NM_052843	chr1,chr1,chr1	-,+,+	MRPL55,OBSCN,OBSCN	-99999,-1202,-1202
chrX:21855921-21857657	chrX	+	21856339	21857614	True	NM_015884,NM_014332	chrX,chrX	+,-	MBTPS2,SMPX	41,-80109
chr1:228271727-228273288	chr1	+	228271822	228273122	True	NM_001024227,NM_001024226,NM_024319,NM_001024228,NM_001658	chr1,chr1,chr1,chr1,chr1	+,+,-,+,+	ARF1,ARF1,C1orf35,ARF1,ARF1	-1022,-1512,17950,-1022,-1512
chr6:26183570-26184180	chr6	+	26183650	26183924	True	NM_003523,NM_003539	chr6,chr6	+,-	HIST1H2BE,HIST1H4D	99,5432
chr4:7436289-7436747	chr4	+	7436326	7436536	True	NR_036238,NM_001085382	chr4,chr4	+,-	MIR4274,PSAPL1	25218,214
chr5:76146907-76148584	chr5	+	76147190	76148623	True	NR_003014,NM_004101,NM_130772	chr5,chr5,chr5	-,-,+	SNORA47,F2RL2,S100Z	227826,-227950,-1415
chr6:32099580-32101544	chr6_mcf_hap5	+	3479530	3480177	False	NM_001136153,NM_138717,NM_022110,NM_004381	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	-,+,-,-	ATF6B,PPT2,FKBPL,ATF6B	-3685,20874,-1635,-3685
chr6:32099580-32101544	chr6_dbb_hap3	+	3378876	3379523	False	NM_001136153,NM_138717,NM_022110,NM_004381	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	-,+,-,-	ATF6B,PPT2,FKBPL,ATF6B	-3687,20878,-1637,-3687
chr6:32099580-32101544	chr6	+	32099703	32100350	True	NM_001136153,NM_138717,NM_022110,NM_004381	chr6,chr6,chr6,chr6	-,+,-,-	ATF6B,PPT2,FKBPL,ATF6B	-3686,20878,-1636,-3686
chr6:32099580-32101544	chr6_ssto_hap7	+	3447431	3448078	False	NM_030651,NM_138717	chr6_ssto_hap7,chr6_ssto_hap7	-,+	PRRT1,PPT2	19423,20875
chr6:32099580-32101544	chr6_cox_hap2	+	3570366	3571013	False	NM_001136153,NM_138717,NM_022110,NM_004381	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	-,+,-,-	ATF6B,PPT2,FKBPL,ATF6B	-3689,20883,-1639,-3689
chr3:44768417-44769692	chr3	+	44768820	44769461	True	NM_145044,NM_020696	chr3,chr3	+,-	ZNF501,KIAA1143	1662,33763
chr20:34893485-34893736	chr20	+	34893484	34893734	True	NR_027451,NM_015511	chr20,chr20	-,+	LOC647979,C20orf4	-254602,-69088
chr11:118098782-118100094	chr11	+	118098836	118100128	True	NM_001098526,NM_000733	chr11,chr11	-,+	AMICA1,CD3E	-3027,75166
chr18:32401774-32401979	chr18	+	32401788	32401955	True	NM_001198944,NM_001198942,NM_001198943,NM_001112734,NM_032981,NM_032980	chr18,chr18,chr18,chr18,chr18,chr18	+,+,+,-,+,+	DTNA,DTNA,DTNA,ZSCAN30,DTNA,DTNA	-3593,-3593,-3914,468298,-3538,-3538
chr19:12917786-12918154	chr19	+	12918018	12918104	True	NM_005809,NM_181738,NM_006397	chr19,chr19,chr19	-,-,+	PRDX2,PRDX2,RNASEH2A	-5324,-5324,-641
chr20:23730170-23730819	chr20	+	23730209	23730759	True	NM_001898,NR_001279	chr20,chr20	-,+	CST1,CSTT	865,-230477
chr11:61586639-61586940	chr11	+	61586694	61586776	True	NM_013402,NM_004265,NR_031729	chr11,chr11,chr11	-,+,-	FADS1,FADS2,MIR1908	-2165,8936,-3982
chr22:31065425-31066045	chr22	+	31065574	31065882	True	NM_152511,NM_030758	chr22,chr22	-,+	DUSP18,OSBP2	-1702,24910
chr11:72433416-72433969	chr11	+	72433469	72433947	True	NM_015242,NM_001135190,NM_033388	chr11,chr11,chr11	-,-,+	ARAP1,ARAP1,ATG16L2	-66,-66,91503
chr9:139840308-139841193	chr9	+	139840556	139841154	True	NM_000606,NM_018998,NM_178536	chr9,chr9,chr9	+,-,+	C8G,FBXW5,LCN12	-909,-1383,5613
chr10:105004468-105004722	chr10	+	105004514	105004748	True	NM_012229,NM_001143909	chr10,chr10	-,+	NT5C2,LOC729020	-51458,895
chr19:49868815-49869343	chr19	+	49868884	49869096	True	NM_014419,NM_003598,NM_001197302,NM_001197301	chr19,chr19,chr19,chr19	+,-,+,+	DKKL1,TEAD2,DKKL1,DKKL1	-1893,-3170,-1948,-1893
chr9:92220545-92220745	chr9	+	92220627	92220737	True	NM_006705,NM_006378	chr9,chr9	+,-	GADD45G,SEMA4D	-751,-126016
chr7:30811527-30811797	chr7	+	30811531	30811755	True	NM_032222,NM_001202481	chr7,chr7	+,-	FAM188B,CRHR2	-549,-71812
chr22:19927690-19928891	chr22	+	19927905	19928785	True	NM_006440,NM_001135161,NM_000754	chr22,chr22,chr22	-,+,+	TXNRD2,COMT,COMT	632,9674,477
chr4:74847792-74848986	chr4	+	74847796	74849015	True	NM_001511,NM_002619,NM_002704	chr4,chr4,chr4	+,-,-	CXCL1,PF4,PPBP	-112738,-81,4949
chr4:48832806-48833086	chr4	+	48832834	48833107	True	NM_001079842,NM_001079841,NM_001079840,NM_015030,NM_001168254,NM_001079839,NM_017830	chr4,chr4,chr4,chr4,chr4,chr4,chr4	+,+,+,-,+,+,+	OCIAD1,OCIAD1,OCIAD1,FRYL,OCIAD1,OCIAD1,OCIAD1	136,-22,-22,-50518,215,136,-22
chr16:89789360-89789603	chr16	+	89789452	89789514	True	NM_001113525,NM_152287,NM_004913	chr16,chr16,chr16	+,+,-	ZNF276,ZNF276,C16orf7	-1551,-2110,-2058
chrX:153094199-153094423	chrX	+	153094204	153094436	True	NM_032512,NM_006280	chrX,chrX	-,+	PDZD4,SSR4	1617,-34236
chr4:55097284-55097604	chr4	+	55097306	55097616	True	NM_012110,NM_006206	chr4,chr4	-,+	CHIC2,PDGFRA	-166518,-2093
chr19:18284201-18284528	chr19	+	18284241	18284433	True	NM_002866,NM_006332	chr19,chr19	-,+	RAB3A,IFI30	30491,145
chr15:23087175-23087654	chr15	+	23087345	23087577	True	NM_001142275,NM_144599,NM_001033028	chr15,chr15,chr15	-,-,+	NIPA1,NIPA1,CYFIP1	-502,-909,-131644
chr3:126242786-126243094	chr3	+	126242794	126243000	True	NM_144639,NM_001165974,NM_152889	chr3,chr3,chr3	-,-,+	UROC1,UROC1,CHST13	-6178,-6178,175
chr22:29133616-29135397	chr22	+	29133802	29134648	True	NM_007194,NM_001005735,NM_172002,NM_145862	chr22,chr22,chr22,chr22	-,-,+,-	CHEK2,CHEK2,HSCB,CHEK2	3224,3224,3394,3224
chr17:21028643-21030055	chr17	+	21028707	21030095	True	NM_015276,NM_015510	chr17,chr17	-,+	USP22,DHRS7B	-82355,162
chr19:30207979-30208893	chr19	+	30208051	30208715	True	NM_001031726,NM_024310,NM_031448	chr19,chr19,chr19	-,+,-	C19orf12,PLEKHF1,C19orf12	-2088,-51775,-1599
chr7:64838781-64839094	chr7	+	64838785	64839039	True	NM_152626,NM_001007253,NM_007139	chr7,chr7,chr7	+,-,+	ZNF92,ERV3,ZNF92	-68,-371661,-68
chr19:16145928-16146488	chr19	+	16146123	16146519	True	NR_024336,NR_024335,NM_021187	chr19,chr19,chr19	+,+,-	FLJ25328,FLJ25328,CYP4F11	-885,-1651,-100447
chr14:74085016-74085688	chr14	+	74085028	74085555	True	NM_001037162,NM_203309	chr14,chr14	+,-	ACOT6,HEATR4	-1531,-59377
chr10:102756958-102757280	chr10	+	102757118	102757264	True	NM_001163812,NM_001163813,NM_001163814,NM_032112,NM_021830,NM_176794,NM_176793,NM_176792,NM_032429	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,-,+,-,-,-,+	C10orf2,C10orf2,C10orf2,MRPL43,C10orf2,MRPL43,MRPL43,MRPL43,LZTS2	-9876,-9876,-9876,-9846,-9876,-9846,-9846,-9846,-305
chr21:38740564-38740957	chr21	+	38740583	38740979	True	NM_101395,NM_006052	chr21,chr21	+,-	DYRK1A,DSCR3	-783,-100750
chr1:29139835-29140708	chr1	+	29139875	29140595	True	NM_000911,NM_005644	chr1,chr1	+,-	OPRD1,TAF12	-1272,-170271
chr15:70128343-70129773	chr15	+	70128441	70129781	True	NR_026764,NR_030714	chr15,chr15	+,-	C15orf50,MIR629	-919,242076
chr9:91608808-91609103	chr9	+	91608852	91609104	True	NM_001001938,NM_016848,NM_001142413,NM_005226	chr9,chr9,chr9,chr9	+,-,+,+	C9orf47,SHC3,C9orf47,S1PR3	-3125,184628,-3125,-2541
chr17:58196610-58196925	chr17	+	58196719	58196926	True	NM_000717,NR_027408	chr17,chr17	+,-	CA4,LOC653653	30375,-16439
chr17:58196610-58196925	chr17	-	58104341	58104548	False	NM_000717,NR_002924	chr17,chr17	+,-	CA4,DHX40P1	122753,-8005
chr19:11640719-11641019	chr19	+	11640975	11641053	True	NM_001142464,NM_001142465,NM_016581,NR_024551,NM_001299	chr19,chr19,chr19,chr19,chr19	-,-,-,-,+	ECSIT,ECSIT,ECSIT,ECSIT,CNN1	-988,-988,-988,-1295,8525
chr2:24309691-24310906	chr2	+	24309690	24310392	True	NM_147184,NM_004881,NM_001145710	chr2,chr2,chr2	-,-,+	TP53I3,TP53I3,LOC375190	-2035,-1962,35957
chr14:71049960-71051027	chr14	+	71050144	71051058	True	NM_015351,NM_005466	chr14,chr14	+,-	TTC9,MED6	57445,16376
chr18:903527-903746	chr18	+	903605	903794	True	NM_001117,NM_001099733,NM_005433	chr18,chr18,chr18	+,+,-	ADCYAP1,ADCYAP1,YES1	1502,1149,-91278
chr16:52564407-52566371	chr16	+	52564612	52566318	True	NM_001080430,NM_025134	chr16,chr16	-,+	TOX3,CHD9	14538,522626
chr12:27103314-27104240	chr12	+	27103563	27104072	True	NM_018164,NM_015633	chr12,chr12	-,+	C12orf11,FGFR1OP2	-12309,-12316
chr20:32248401-32248733	chr20	+	32248545	32248727	True	NM_080825,NM_031231,NM_001024675	chr20,chr20,chr20	+,-,+	C20orf144,NECAB3,C20orf134	1364,13587,5576
chr19:54018910-54019424	chr19	+	54019046	54019390	True	NM_018555,NR_002938	chr19,chr19	+,-	ZNF331,LOC284379	4786,87411
chr8:21989010-21989277	chr8	+	21989131	21989277	True	NM_005144,NM_001172357,NM_018411	chr8,chr8,chr8	-,+,-	HR,SFTPC,HR	-566,29906,-566
chr4:17776948-17778308	chr4	+	17777100	17778356	True	NM_015688,NM_022346	chr4,chr4	-,+	FAM184B,NCAPG	4830,34168
chr19:38145882-38146118	chr19	+	38145885	38146149	True	NM_001172226,NM_014898	chr19,chr19	+,-	ZNF540,ZFP30	-60205,214
chr1:151019272-151019526	chr1	+	151019274	151019430	True	NM_001038707,NM_017860	chr1,chr1	-,+	CDC42SE1,C1orf56	12745,828
chr11:6804981-6806426	chr11	+	6804996	6806402	True	NM_003696,NM_001004489	chr11,chr11	-,+	OR6A2,OR2AG1	10787,82
chr16:85210701-85211364	chr16	+	85210866	85211330	True	NR_033984,NM_198491	chr16,chr16	+,-	LOC400548,FAM92B	-40161,-64752
chr19:45542537-45543790	chr19	+	45542937	45543753	True	NM_145288,NM_007056	chr19,chr19	-,+	ZNF296,CLASRP	35985,-690
chr19:11849652-11849932	chr19	+	11849667	11849967	True	NM_152355,NM_001080493	chr19,chr19	+,-	ZNF441,ZNF823	27847,-23
chr2:97303396-97303613	chr2	+	97303406	97303497	True	NM_017991,NM_001113382,NM_001115016	chr2,chr2,chr2	-,+,-	KIAA1310,FER1L5,KIAA1310	673,5076,673
chr1:201253969-201254489	chr1	+	201254085	201254292	True	NM_000364,NM_000299,NM_001005337	chr1,chr1,chr1	-,+,+	TNNT2,PKP1,PKP1	92564,-1563,-1563
chr7:99441179-99442614	chr7	+	99441423	99442207	True	NM_001005276,NM_057096	chr7,chr7	-,+	OR2AE1,CYP3A43	32499,-15839
chr17:36280552-36281700	chr17	+	36280562	36281676	True	NM_032258,NR_024178,NM_001123391	chr17,chr17,chr17	+,-,+	TBC1D3F,LOC284100,TBC1D3	2283,-36199,2283
chr17:36280552-36281700	chr17	-	34759331	34760445	False	NM_001123392,NM_004773	chr17,chr17	-,+	TBC1D3H,ZNHIT3	-2281,82027
chr17:36280552-36281700	chr17	-	34810386	34811496	False	NM_001001418,NM_004773,NM_001040282	chr17,chr17,chr17	-,+,-	TBC1D3C,ZNHIT3,TBC1D3G	-2295,30976,-2283
chr17:36280552-36281700	chr17	-	34594322	34595376	False	NM_001001435,NM_001001418	chr17,chr17	+,-	CCL4L1,TBC1D3C	44657,-2295
chr17:36280552-36281700	chr17	-	34506278	34507396	False	NM_001001417,NM_001001435	chr17,chr17	-,+	TBC1D3B,CCL4L1	-2290,31071
chr10:106400382-106400630	chr10	+	106400463	106400667	True	NM_033397,NM_014978	chr10,chr10	-,+	ITPRIP,SORCS3	-306800,191
chr6:168477134-168478983	chr6	+	168477576	168478904	True	NM_030615,NM_001122841,NM_024919	chr6,chr6,chr6	+,-,-	KIF25,FRMD1,FRMD1	-59074,-1044,985
chr14:35212031-35212659	chr14	+	35212191	35212255	True	NR_002937,NR_028131	chr14,chr14	+,-	C14orf19,CFL2	196872,-28162
chr8:117779036-117780994	chr8	+	117779221	117780504	True	NM_003756,NM_032334	chr8,chr8	-,+	EIF3H,UTP23	-11159,-530
chr14:60190186-60191219	chr14	+	60190472	60191207	True	NM_016475,NM_206857	chr14,chr14	+,-	JKAMP,RTN1	-239363,3275
chrX:118532152-118532450	chrX	+	118532155	118532471	True	NM_145305,NR_028443	chrX,chrX	+,-	SLC25A43,LOC100303728	786,70662
chr12:117173768-117174225	chr12	+	117173962	117174256	True	NM_001109903,NM_032814,NM_024738	chr12,chr12,chr12	+,+,-	RNFT2,RNFT2,C12orf49	1839,1839,1637
chr12:14135121-14135323	chr12	+	14135206	14135334	True	NM_000834,NM_018179	chr12,chr12	-,+	GRIN2B,ATF7IP	-2184,383276
chr19:13066529-13067128	chr19	+	13066793	13067075	True	NM_005053,NM_052850	chr19,chr19	+,-	RAD23A,GADD45GIP1	-10190,1025
chr19:33624376-33625527	chr19	+	33624451	33625466	True	NM_173479,NM_033103	chr19,chr19	+,-	WDR88,RHPN2	-1517,-68627
chr14:35519303-35520416	chr14	+	35519674	35520256	True	NM_001079519,NM_017917,NM_173607	chr14,chr14,chr14	+,-,+	FAM177A1,PPP2R3C,FAM177A1	-5612,71313,-4115
chr10:103874796-103875153	chr10	+	103874842	103875174	True	NM_001113407,NM_015062,NM_003893	chr10,chr10,chr10	-,+,-	LDB1,PPRC1,LDB1	5086,17612,-119
chr14:62469335-62470820	chr14	+	62469409	62470703	True	NM_031914,NM_001017970	chr14,chr14	+,-	SYT16,TMEM30B	-6919,-720879
chr4:38832056-38833797	chr4	+	38832468	38833838	True	NM_006068,NM_138389	chr4,chr4	-,+	TLR6,FAM114A1	24650,35515
chr1:43124104-43124316	chr1	+	43124147	43124315	True	NM_006347,NM_001123395	chr1,chr1	+,-	PPIH,CLDN19	-150,81660
chr10:118307160-118308913	chr10	+	118307331	118308687	True	NM_000936,NM_144661	chr10,chr10	+,-	PNLIP,C10orf82	-1966,120844
chr1:47127041-47127725	chr1	+	47127066	47127487	True	NM_022745,NM_001042546,NM_001145474	chr1,chr1,chr1	-,-,+	ATPAF1,ATPAF1,C1orf223	6670,6670,10012
chr1:23570752-23571612	chr1	+	23570828	23571554	True	NR_033690,NM_000864	chr1,chr1	+,-	C1orf213,HTR1D	123909,-49606
chr2:99349106-99350102	chr2	+	99349485	99349989	True	NM_012214,NM_014044	chr2,chr2	-,+	MGAT4A,UNC50	-1896,-124501
chr21:48055891-48057017	chr21	+	48056424	48057046	True	NM_006272,NM_001535	chr21,chr21	-,+	S100B,PRMT2	-31389,-949
chr19:52840559-52841475	chr19	+	52840916	52841476	True	NM_001161427,NM_001161426,NM_001161425,NM_001102657,NM_173530	chr19,chr19,chr19,chr19,chr19	+,+,+,-,+	ZNF610,ZNF610,ZNF610,ZNF836,ZNF610	-1478,-1478,-1478,-166020,7205
chr2:174671196-174672294	chr2	+	174671268	174671939	True	NM_145810,NM_001017371	chr2,chr2	+,-	CDCA7,SP3	-451758,157059
chr9:136344496-136344753	chr9	+	136344574	136344644	True	NM_017586,NM_001145099,NM_017585	chr9,chr9,chr9	+,-,-	C9orf7,SLC2A6,SLC2A6	-19538,-298,-298
chr3:38076139-38076893	chr3	+	38076154	38076684	True	NM_006225,NR_024071,NM_001130964,NM_007335,NM_007337	chr3,chr3,chr3,chr3,chr3	-,-,-,+,+	PLCD1,PLCD1,PLCD1,DLEC1,DLEC1	-5000,-9876,-9876,4011,4011
chr9:112403328-112403722	chr9	+	112403390	112403768	True	NM_002829,NM_001037293	chr9,chr9	-,+	PTPN3,PALM2	-142797,-374
chr6:44214262-44214850	chr6	+	44214351	44214894	True	NM_007355,NM_178148	chr6,chr6	+,-	HSP90AB1,SLC35B2	26,10439
chr4:79473436-79473867	chr4	+	79473636	79473848	True	NM_005139,NM_001040202	chr4,chr4	+,-	ANXA3,PAQR3	-957,386784
chr6:137115022-137115520	chr6	+	137115227	137115326	True	NM_000288,NM_005923	chr6,chr6	+,-	PEX7,MAP3K5	28375,-1571
chr15:40655993-40656226	chr15	+	40656093	40656165	True	NM_207380,NM_033510	chr15,chr15	-,+	C15orf52,DISP2	-22925,-5710
chr21:45553646-45553880	chr21	+	45553645	45553797	True	NM_198155,NM_004649,NM_015259	chr21,chr21,chr21	+,+,-	C21orf33,C21orf33,ICOSLG	-202,-202,107087
chr6:35748261-35749921	chr6	+	35748499	35749931	True	NM_001010886,NM_207409,NM_001832	chr6,chr6,chr6	+,+,-	C6orf127,C6orf126,CLPS	-37,-4159,15221
chr4:37892290-37892492	chr4	+	37892438	37892514	True	NM_001085400,NM_015173	chr4,chr4	-,+	RELL1,TBC1D1	-204439,205
chr1:42801102-42801304	chr1	+	42801125	42801327	True	NM_001198852,NM_001198850,NM_001198851,NM_014947,NM_173642	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	FOXJ3,FOXJ3,FOXJ3,FOXJ3,RIMKLA	-239,271,-489,-222,45140
chr2:11295922-11296271	chr2	+	11296071	11296285	True	NM_152391,NM_004850	chr2,chr2	+,-	PQLC3,ROCK2	-582,188476
chr19:38713603-38714461	chr19	+	38713652	38714448	True	NM_001135156,NM_004647,NM_001135155,NM_001166103	chr19,chr19,chr19,chr19	-,-,-,+	DPF1,DPF1,DPF1,SPINT2	5919,492,492,40649
chr16:48688738-48690497	chr16	+	48689093	48690387	True	NM_153029,NM_031490	chr16,chr16	-,+	N4BP1,LONP2	-44973,-410933
chr1:209893699-209894416	chr1	+	209893793	209894335	True	NM_152485,NM_005525	chr1,chr1	-,+	C1orf74,HSD11B1	63605,-15660
chr11:132816342-132816736	chr11	+	132816377	132816783	True	NM_002545,NM_016522	chr11,chr11	-,+	OPCML,NTM	-3340,-1035718
chr9:2814914-2815489	chr9	+	2814917	2815494	True	NM_133497,NM_014878	chr9,chr9	+,-	KCNV2,KIAA0020	-97442,28688
chr15:32907083-32907611	chr15	+	32907136	32907428	True	NM_014783,NM_199357,NR_036650	chr15,chr15,chr15	+,+,-	ARHGAP11A,ARHGAP11A,LOC100288615	262,262,-81194
chr15:32907083-32907611	chr15	+	30917467	30917933	False	NM_148911,NM_001039841	chr15,chr15	-,+	CHRFAM7A,ARHGAP11B	-231603,945
chr18:9332044-9332298	chr18	+	9332068	9332311	True	NM_020648,NM_001042388	chr18,chr18	+,-	TWSG1,PPP4R1	2453,282340
chr11:58345982-58346607	chr11	+	58346106	58346542	True	NM_004811,NM_001197051,NM_001143995,NR_024091,NM_053023	chr11,chr11,chr11,chr11,chr11	-,+,-,+,+	LPXN,ZFP91,LPXN,ZFP91-CNTF,ZFP91	-2716,44,-467,44,44
chr14:48144367-48144717	chr14	+	48144446	48144671	True	NR_037792,NM_001113498	chr14,chr14	+,-	LRR1,MDGA2	1920743,-289
chr13:64314937-64315298	chr13	+	64314945	64315065	True	NM_022843,NR_002171	chr13,chr13	-,+	PCDH20,OR7E156P	-2325290,-3428
chr10:9009144-9010503	chr10	+	9009221	9010155	True	NM_002051,NR_024256	chr10,chr10	+,-	GATA3,FLJ45983	-912605,-913774
chr8:99060247-99061725	chr8	+	99060476	99061497	True	NR_002581,NM_001170806,NM_000989	chr8,chr8,chr8	-,+,-	SNORA72,C8orf47,RPL30	-6031,15252,-2658
chr11:77185979-77187069	chr11	+	77185981	77186699	True	NM_001128620,NM_002576,NM_173039	chr11,chr11,chr11	-,-,+	PAK1,PAK1,AQP11	-873,-873,113980
chr20:13992265-13994077	chr20	+	13992509	13993521	True	NM_080676,NM_025229	chr20,chr20	+,-	MACROD2,SEL1L2	-16420,-21247
chrX:53484669-53485824	chrX	+	53484837	53485379	True	NM_001031745,NM_004493	chrX,chrX	+,-	RIBC1,HSD17B10	-34998,-23514
chr7:75037211-75038746	chr7	+	75037835	75038769	True	NR_003614,NR_033322	chr7,chr7	-,+	PMS2L2,NSUN5P1	-49620,854
chr7:75037211-75038746	chr7	-	72723634	72723700	False	NM_148956,NM_001168348,NM_018044,NM_001135211,NM_001168347	chr7,chr7,chr7,chr7,chr7	-,-,-,+,-	NSUN5,NSUN5,NSUN5,FKBP6,NSUN5	-770,-770,-770,18454,-770
chr7:75037211-75038746	chr7	-	72426129	72427069	False	NR_033323,NR_003602	chr7,chr7	-,+	NSUN5P2,LOC541473	-827,13122
chr18:7227841-7229055	chr18	+	7227945	7229081	True	NM_005559,NM_001105581	chr18,chr18	-,+	LAMA1,LRRC30	-110132,2055
chr2:234155845-234157133	chr2	+	234155854	234157026	True	NM_019850,NM_001190267,NM_001190266,NM_198890,NM_030803,NM_017974	chr2,chr2,chr2,chr2,chr2,chr2	-,+,+,+,+,+	NGEF,ATG16L1,ATG16L1,ATG16L1,ATG16L1,ATG16L1	-277903,3190,3190,3190,3190,3190
chr5:154318381-154318738	chr5	+	154318644	154318778	True	NM_001014990,NM_015465,NM_014180	chr5,chr5,chr5	+,-,+	MRPL22,GEMIN5,MRPL22	1854,-868,1854
chr19:41223458-41224083	chr19	+	41223470	41224004	True	NM_025194,NM_001142555,NM_024876	chr19,chr19,chr19	+,-,-	ITPKC,ADCK4,ADCK4	-513,-2459,-680
chr10:83659177-83660001	chr10	+	83659186	83660047	True	NM_001165973,NM_138812	chr10,chr10	+,-	NRG3,DYDC1	-21794,-1542686
chr2:128154764-128155648	chr2	+	128154834	128155522	True	NM_000312,NM_006609	chr2,chr2	+,-	PROC,MAP3K2	20473,-54064
chr11:1892184-1892486	chr11	+	1892258	1892432	True	NR_036185,NM_001013254,NM_001013255,NM_001013253	chr11,chr11,chr11,chr11	-,+,+,+	MIR4298,LSP1,LSP1,LSP1	-11492,-210,-155,-2406
chr1:111682951-111683190	chr1	+	111683012	111683076	True	NM_178454,NM_006090,NM_001007794	chr1,chr1,chr1	-,+,+	DRAM2,CEPT1,CEPT1	-174,-230,-814
chrX:38189489-38190597	chrX	+	38189564	38190312	True	NM_001034853,NM_000328,NM_000531	chrX,chrX,chrX	-,-,+	RPGR,RPGR,OTC	-2776,-2776,21423
chr15:78288491-78288983	chr15	+	78288816	78289002	True	NM_001101404,NR_026998	chr15,chr15	+,-	SH2D7,LOC91450	95924,-2249
chr21:46219874-46220877	chr21	+	46219999	46220812	True	NM_182688,NM_003343,NM_198699,NM_001202489	chr21,chr21,chr21,chr21	-,-,+,-	UBE2G2,UBE2G2,KRTAP10-12,UBE2G2	996,996,-102977,996
chr17:38476073-38476523	chr17	+	38476175	38476537	True	NM_001145301,NM_001145302,NM_152219	chr17,chr17,chr17	+,+,-	RARA,RARA,GJD3	-1753,-1753,44458
chr1:48353367-48353636	chr1	+	48353378	48353684	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	108928,334672
chr8:17097800-17099643	chr8	+	17098039	17099619	True	NM_152415,NM_001145152,NM_054026,NM_013354	chr8,chr8,chr8,chr8	+,+,-,-	VPS37A,VPS37A,CNOT7,CNOT7	4781,4781,4818,4818
chr9:35603312-35603642	chr9	+	35603356	35603690	True	NM_001782,NM_006285	chr9,chr9	-,+	CD72,TESK1	14784,1590
chr5:21455151-21456174	chr5	+	21455150	21455700	True	NR_027027,NR_027026,NM_004061,NR_027028	chr5,chr5,chr5,chr5	+,+,-,+	GUSBP1,GUSBP1,CDH12,GUSBP1	3888,3888,1398088,3888
chr5:21455151-21456174	chr5	-	29422229	29422284	False	NM_001100412,NR_033961	chr5,chr5	-,+	DROSHA,LOC729862	2110048,-495304
chr1:1199481-1199794	chr1	+	1199497	1199821	True	NM_058167,NM_001130413,NM_194315,NM_194457,NM_194458	chr1,chr1,chr1,chr1,chr1	-,+,-,-,-	UBE2J2,SCNN1D,UBE2J2,UBE2J2,UBE2J2	9463,10816,9463,9463,9463
chr17:2613109-2614670	chr17	+	2613114	2614171	True	NM_015229,NM_001100398	chr17,chr17	-,+	KIAA0664,RAP1GAP2	807,85560
chr3:183601353-183601985	chr3	+	183601379	183601977	True	NM_182537,NM_018622,NM_001037639	chr3,chr3,chr3	+,-,-	HTR3D,PARL,PARL	147354,766,766
chr20:25563098-25564240	chr20	+	25563275	25563430	True	NM_025176,NM_021067	chr20,chr20	-,+	NINL,GINS1	2780,-175014
chr4:88420671-88420945	chr4	+	88420722	88420986	True	NM_198038,NM_001128310	chr4,chr4	+,-	NUDT9,SPARCL1	-77046,29719
chr21:30392149-30393841	chr21	+	30392239	30393321	True	NM_016940,NM_001001992,NM_001032410,NM_006447	chr21,chr21,chr21,chr21	-,+,+,+	RWDD2B,USP16,USP16,USP16	-554,3616,3616,3616
chr19:17630502-17631277	chr19	+	17630521	17630695	True	NM_012088,NM_001098524,NM_173544,NM_138454	chr19,chr19,chr19,chr19	+,+,+,-	PGLS,FAM129C,FAM129C,NXNL1	-8141,3414,3414,-58796
chr21:38365306-38366107	chr21	+	38365636	38366104	True	NM_000411,NM_018962	chr21,chr21	-,+	HLCS,DSCR6	-3100,12758
chr19:41225003-41225689	chr19	+	41225002	41225404	True	NM_025194,NM_001142555,NM_024876	chr19,chr19,chr19	+,-,-	ITPKC,ADCK4,ADCK4	-2045,-3991,-2212
chr9:33291792-33292363	chr9	+	33291918	33292320	True	NM_147134,NM_002504,NM_004323,NM_147133	chr9,chr9,chr9,chr9	+,+,-,+	NFX1,NFX1,BAG1,NFX1	-1553,-1553,-27159,-1553
chr6:130763960-130765738	chr6	+	130764088	130765636	True	NM_052913,NM_001017373	chr6,chr6	+,-	TMEM200A,SAMD3	-5886,-219989
chr6:154377550-154377880	chr6	+	154377572	154377882	True	NM_001130699,NM_001145284	chr6,chr6	-,+	IPCEF1,OPRM1	273383,-17089
chr10:22993698-22994129	chr10	+	22993732	22994164	True	NM_005028,NM_173081	chr10,chr10	-,+	PIP4K2A,ARMC3	9389,222789
chr4:40332757-40334420	chr4	+	40333088	40334272	True	NM_019027,NM_017581	chr4,chr4	-,+	RBM47,CHRNA9	183775,3196
chr4:102255540-102257081	chr4	+	102255902	102257060	True	NM_000944,NR_033874	chr4,chr4	-,+	PPP3CA,FLJ20021	11618,11873
chr6:36350989-36352386	chr6	+	36351025	36352296	True	NM_016135,NM_173562	chr6,chr6	-,+	ETV7,KCTD20	3222,58247
chr11:66084892-66085606	chr11	+	66085084	66085206	True	NM_020404,NM_153266	chr11,chr11	-,+	CD248,TMEM151A	-569,-25762
chr7:99687692-99689101	chr7	+	99688016	99689140	True	NM_017715,NR_029831,NR_029498,NM_182776,NR_029510,NM_004722,NM_032924,NM_006833	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,+,-,+	ZNF3,MIR106B,MIR25,MCM7,MIR93,AP4M1,ZNF3,COPS6	-8645,2607,2176,9290,2380,9989,-8645,-1484
chr1:52829443-52831399	chr1	+	52829942	52831285	True	NM_032864,NM_032449	chr1,chr1	+,-	PRPF38A,CC2D1B	38933,643
chrX:34149809-34150355	chrX	+	34149841	34150339	True	NM_203408,NM_152631	chrX,chrX	-,+	FAM47A,FAM47B	158,810573
chr1:25069936-25070720	chr1	+	25069996	25070600	True	NM_013943,NM_004350	chr1,chr1	+,-	CLIC4,RUNX3	1159,186220
chr6:31721796-31722822	chr6_qbl_hap6	+	3015950	3016150	False	NR_037846,NM_001288	chr6_qbl_hap6,chr6_qbl_hap6	+,-	MSH5-C6ORF26,CLIC1	-14638,-17971
chr6:31721796-31722822	chr6_mcf_hap5	+	3101994	3102194	False	NM_001288,NM_001039651	chr6_mcf_hap5,chr6_mcf_hap5	-,+	CLIC1,C6orf26	-17966,8275
chr6:31721796-31722822	chr6_cox_hap2	+	3231899	3232099	False	NM_001288,NM_001039651	chr6_cox_hap2,chr6_cox_hap2	-,+	CLIC1,C6orf26	-17937,8259
chr6:31721796-31722822	chr6	+	31722305	31722505	True	NM_001288,NM_001039651	chr6,chr6	-,+	CLIC1,C6orf26	-17964,8267
chr6:31721796-31722822	chr6_dbb_hap3	+	3007883	3008083	False	NM_001288,NM_001039651	chr6_dbb_hap3,chr6_dbb_hap3	-,+	CLIC1,C6orf26	-17971,8271
chr18:74517591-74518158	chr18	+	74517663	74518143	True	NM_007345,NM_001025081	chr18,chr18	+,-	ZNF236,MBP	17972,210962
chr3:50389456-50389765	chr3	+	50389455	50389629	True	NM_015896,NM_007022,NM_007024,NM_006545	chr3,chr3,chr3,chr3	-,+,-,-	ZMYND10,CYB561D2,TMEM115,NPRL2	-6299,-1209,7360,-969
chr7:87093492-87094994	chr7	+	87093505	87094237	True	NM_000443,NM_021151	chr7,chr7	-,+	ABCB4,CROT	10832,-118606
chr14:24732615-24733228	chr14	+	24732728	24733191	True	NM_000359,NM_004581,NM_016576,NM_182836	chr14,chr14,chr14,chr14	-,-,+,-	TGM1,RABGGTA,GMPR2,RABGGTA	-312,7602,-30676,7662
chr18:53644742-53645822	chr18	+	53644822	53645830	True	NM_003199,NM_015285	chr18,chr18	-,+	TCF4,WDR7	-388962,672785
chr11:14911529-14912183	chr11	+	14911782	14912059	True	NM_024514,NM_000728	chr11,chr11	-,+	CYP2R1,CALCB	1745,183086
chr14:105782520-105782956	chr14	+	105782544	105782888	True	NM_001519,NM_015197,NM_001100913	chr14,chr14,chr14	-,+,+	BRF1,PACS2,PACS2	-15215,-1514,-1514
chr1:247168713-247169449	chr1	+	247169093	247169189	True	NR_015422,NM_001204221,NR_037892,NM_020394	chr1,chr1,chr1,chr1	+,-,-,-	LOC149134,ZNF695,ZNF695,ZNF695	-216234,2264,2264,2264
chr12:96251780-96252139	chr12	+	96251906	96252128	True	NM_003095,NM_021229	chr12,chr12	+,-	SNRPF,NTN4	580,-67370
chr19:46496848-46498127	chr19	+	46496862	46498145	True	NM_002516,NM_001080402	chr19,chr19	-,+	NOVA2,CCDC61	-20205,193
chrX:54211029-54211434	chrX	+	54211068	54211341	True	NM_198456,NM_058163,NM_017848	chrX,chrX,chrX	-,+,-	FAM120C,TSR2,FAM120C	-1354,255511,-1354
chr14:103781750-103782166	chr14	+	103781805	103782021	True	NR_033938,NM_001969	chr14,chr14	-,+	LOC100131366,EIF5	-126440,18471
chr1:117663165-117664087	chr1	+	117663292	117663912	True	NM_001145635,NR_030640,NM_025188	chr1,chr1,chr1	-,+,-	TRIM45,MIR942,TRIM45	549,-26078,549
chr1:28241104-28242376	chr1	+	28241109	28242255	True	NM_001009568,NM_002946	chr1,chr1	+,-	SMPDL3B,RPA2	19248,127
chr2:183358180-183359847	chr2	+	183358888	183359836	True	NM_018981,NM_005019	chr2,chr2	+,-	DNAJC10,PDE1A	221162,27467
chr15:80445499-80445777	chr15	+	80445596	80445771	True	NM_000137,NM_004049	chr15,chr15	+,-	FAH,BCL2A1	-306,-181953
chr14:104310786-104311245	chr14	+	104311133	104311285	True	NM_153046,NM_015316	chr14,chr14	+,-	TDRD9,PPP1R13B	83531,2700
chr10:85933796-85935735	chr10	+	85933891	85935098	True	NM_001017924,NM_207373	chr10,chr10	-,+	LRIT2,C10orf99	50243,-388
chrX:131157200-131157484	chrX	+	131157290	131157482	True	NM_001042452,NM_001042453,NM_194277,NM_016542	chrX,chrX,chrX,chrX	+,+,-,+	MST4,MST4,FRMD7,MST4	153,-96,104618,-96
chr16:50387802-50388803	chr16	+	50387845	50388848	True	NM_001114,NM_001173984	chr16,chr16	+,-	ADCY7,BRD7	-66078,14047
chr7:64363003-64363430	chr7	+	64363346	64363478	True	NR_002789,NR_003099,NM_021148	chr7,chr7,chr7	-,+,+	LOC168474,ZNF273,ZNF273	-49168,141,141
chr3:127841881-127842577	chr3	+	127841911	127842613	True	NM_021937,NM_003707	chr3,chr3	+,-	EEFSEC,RUVBL1	29699,108
chr17:7789765-7790037	chr17	+	7789775	7789974	True	NM_032356,NM_005852,NM_001005273,NM_001005271	chr17,chr17,chr17,chr17	-,+,+,+	LSMD1,CHD3,CHD3,CHD3	-28603,2194,2194,-1703
chr11:67769468-67769984	chr11	+	67769717	67769973	True	NM_030930,NM_001030010,NM_000694,NM_001161473	chr11,chr11,chr11,chr11	-,+,+,+	UNC93B1,ALDH3B1,ALDH3B1,ALDH3B1	1670,7816,7816,6074
chr10:38247831-38248835	chr10	+	38248040	38248399	True	NM_145011,NM_006954	chr10,chr10	-,+	ZNF25,ZNF33A	17107,51178
chrX:140991661-140991921	chrX	+	140991696	140991958	True	NM_005462,NM_145665,NM_177456	chrX,chrX,chrX	+,-,+	MAGEC1,SPANXE,MAGEC3	-105,-205041,-9295
chr19:42352135-42352588	chr19	+	42352475	42352539	True	NM_173506,NM_001040283	chr19,chr19	-,+	LYPD4,DMRTC2	-3967,-3440
chr6:80656208-80656757	chr6	+	80656232	80656756	True	NM_001166691,NM_022726	chr6,chr6	+,-	TTK,ELOVL4	57565,609
chr9:132081968-132082184	chr9	+	132082065	132082177	True	NM_001012715,NM_203434	chr9,chr9	+,-	C9orf106,IER5L	1117,-141525
chr5:179050865-179051096	chr5	+	179050870	179051076	True	NM_005520,NM_001040452	chr5,chr5	-,+	HNRNPH1,RUFY1	-148,-64189
chr12:4133721-4134104	chr12	+	4133883	4134121	True	NM_001759,NM_020367	chr12,chr12	+,-	CCND2,PARP11	248780,-151275
chr2:34172319-34173418	chr2	+	34172433	34173169	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-433542,-219149
chr3:113251076-113251596	chr3	+	113251173	113251477	True	NM_144718,NM_017699	chr3,chr3	-,+	SPICE1,SIDT1	-17139,-6
chr3:36954782-36955285	chr3	+	36954824	36955303	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	31295,79537
chr9:139846923-139847216	chr9	+	139847028	139847214	True	NM_000606,NM_018998,NM_178536	chr9,chr9,chr9	+,-,+	C8G,FBXW5,LCN12	-7381,-7855,-311
chr7:32525602-32526461	chr7	+	32525635	32526504	True	NM_015060,NM_001130710,NR_024466,NM_001139499,NM_012322	chr7,chr7,chr7,chr7,chr7	+,-,-,-,-	AVL9,LSM5,LSM5,LSM5,LSM5	8671,8423,4028,8423,3576
chr19:13054701-13055827	chr19	+	13054772	13055842	True	NM_005053,NM_004461,NM_004343	chr19,chr19,chr19	+,-,+	RAD23A,FARSA,CALR	811,-10214,-5409
chr2:26866770-26867623	chr2	+	26867005	26867567	True	NM_002246,NM_001029881	chr2,chr2	+,-	KCNK3,CIB4	48013,-2794
chr4:54242472-54243301	chr4	+	54242773	54243295	True	NM_001134938,NM_001134937,NM_030917,NM_152540	chr4,chr4,chr4,chr4	+,+,+,-	FIP1L1,FIP1L1,FIP1L1,SCFD2	524,524,524,-10531
chr17:55159771-55161307	chr17	+	55160168	55161216	True	NM_004645,NM_003488	chr17,chr17	-,+	COIL,AKAP1	-121757,1336
chr19:17000190-17000463	chr19	+	17000190	17000490	True	NM_003950,NM_015692	chr19,chr19	+,-	F2RL3,CPAMD8	-415,137185
chr1:91858139-91859654	chr1	+	91858706	91859460	True	NM_001134419,NM_001017975	chr1,chr1	+,-	CDC7,HFM1	106943,11025
chr14:65745632-65746144	chr14	+	65745974	65746142	True	NM_178155,NR_024334	chr14,chr14	+,-	FUT8,LOC645431	131697,133243
chr7:47577495-47577828	chr7	+	47577596	47577754	True	NM_001123065,NM_022748	chr7,chr7	+,-	C7orf65,TNS3	117087,44038
chr11:62388948-62389224	chr11	+	62389023	62389253	True	NM_153265,NM_012200,NM_000327	chr11,chr11,chr11	-,-,+	EML3,B3GAT3,ROM1	-8786,245,-8861
chr6:40558534-40559410	chr6	+	40558539	40559237	True	NR_024015,NM_020737	chr6,chr6	+,-	TDRG1,LRFN2	-212427,-3413
chr17:8125577-8126158	chr17	+	8125614	8126092	True	NR_026951,NM_012393	chr17,chr17	-,+	C17orf44,PFAS	1319,26503
chr14:23386912-23387323	chr14	+	23386929	23387289	True	NM_001077351,NM_173527,NM_001077352,NM_018107	chr14,chr14,chr14,chr14	-,+,-,-	RBM23,REM2,RBM23,RBM23	1157,-34549,1157,1157
chr2:85766266-85766556	chr2	+	85766309	85766463	True	NM_005911,NM_000821	chr2,chr2	+,-	MAT2A,GGCX	-72,22244
chr13:80913620-80914138	chr13	+	80913621	80914115	True	NM_019080,NM_005842	chr13,chr13	+,-	NDFIP2,SPRY2	-858413,1021
chr11:17741545-17741869	chr11	+	17741609	17741813	True	NM_153676,NM_002478	chr11,chr11	-,+	USH1C,MYOD1	-175646,-550
chr17:75373079-75373779	chr17	+	75373108	75373566	True	NM_001113494,NM_001113493,NR_036200	chr17,chr17,chr17	+,+,-	SEPT9,SEPT9,MIR4316	-994,-3887,19620
chr4:120133651-120133872	chr4	+	120133653	120133911	True	NM_001001701,NM_019050	chr4,chr4	-,+	C4orf3,USP53	88107,-18
chr16:27215637-27216505	chr16	+	27215700	27216534	True	NM_024773,NM_145080,NM_001145348	chr16,chr16,chr16	+,-,+	JMJD5,NSMCE1,JMJD5	-944,63635,-455
chr2:172286472-172287960	chr2	+	172287066	172287794	True	NR_028482,NM_024770,NM_001164821,NM_025000	chr2,chr2,chr2,chr2	+,-,+,+	DCAF17,METTL8,DCAF17,DCAF17	2966,3576,2966,2966
chr11:107045856-107047002	chr11	+	107045941	107047037	True	NM_001130037,NM_000855	chr11,chr11	+,-	ELMOD1,GUCY1A2	414779,-156770
chr21:30251722-30253274	chr21	+	30252078	30253323	True	NM_013240,NM_001001992,NM_182749	chr21,chr21,chr21	-,+,-	N6AMT1,USP16,N6AMT1	4421,143614,4421
chr1:120543810-120544118	chr1	+	120543879	120544161	True	NM_024408,NM_006623	chr1,chr1	-,+	NOTCH2,PHGDH	68206,-289511
chr1:120543810-120544118	chr1	-	145277353	145277473	False	NM_032305,NM_001039703	chr1,chr1	-,+	POLR3GL,NBPF10	192964,15897
chr6:170566460-170566923	chr6	+	170566484	170566956	True	NM_032448,NR_002787	chr6,chr6	+,-	FAM120B,LOC154449	48887,4751
chr12:54420695-54421374	chr12	+	54420792	54421345	True	NM_004503,NM_018953,NR_030753,NR_026658	chr12,chr12,chr12,chr12	+,+,+,-	HOXC6,HOXC5,MIR615,LOC100240735	848,5486,6388,54320
chr12:68040774-68041416	chr12	+	68040838	68041407	True	NM_003583,NM_000619,NM_006482	chr12,chr12,chr12	+,-,+	DYRK2,IFNG,DYRK2	1104,512164,1104
chr11:10673890-10675654	chr11	+	10674009	10675535	True	NM_014633,NM_001098579	chr11,chr11	+,-	CTR9,MRVI1	97275,-161
chr13:28677143-28677703	chr13	+	28677457	28677589	True	NM_004119,NM_175854	chr13,chr13	-,+	FLT3,PAN3	-2728,35053
chr8:132913261-132913594	chr8	+	132913576	132913642	True	NM_015137,NM_001080399	chr8,chr8	+,-	EFR3A,OC90	2713,158035
chr10:91295078-91295284	chr10	+	91295082	91295212	True	NM_213606,NM_012420	chr10,chr10	-,+	SLC16A12,IFIT5	151,-120808
chr2:27340424-27340667	chr2	+	27340447	27340549	True	NM_032604,NM_001166239,NM_006569,NM_001166240,NM_001166241	chr2,chr2,chr2,chr2,chr2	+,-,-,-,-	ABHD1,CGREF1,CGREF1,CGREF1,CGREF1	6107,1274,1496,1496,-6477
chr15:75157576-75158771	chr15	+	75157829	75158757	True	NM_005697,NM_002435	chr15,chr15	-,+	SCAMP2,MPI	6963,23652
chr19:4280346-4280683	chr19	+	4280396	4280456	True	NM_001169126,NM_020209	chr19,chr19	-,+	TMIGD2,SHD	22022,-1849
chr1:58996546-58996794	chr1	+	58996597	58996808	True	NR_034014,NM_145243	chr1,chr1	+,-	LOC100131060,OMA1	254014,15693
chr15:80988123-80988357	chr15	+	80988132	80988322	True	NM_021214,NR_030393	chr15,chr15	+,-	FAM108C1,MIR549	-531,146142
chr7:129284604-129285196	chr7	+	129284644	129285243	True	NM_001040110,NR_029614	chr7,chr7	+,-	NRF1,MIR182	-14784,125139
chr8:11222506-11224270	chr8	+	11222609	11224180	True	NR_026814,NM_053279	chr8,chr8	+,-	C8orf12,FAM167A	1730,100153
chrX:84502022-84503195	chrX	+	84502134	84503135	True	NM_021998,NM_024921	chrX,chrX	+,-	ZNF711,POF1B	-3203,131683
chr14:78173580-78174240	chr14	+	78173741	78174288	True	NM_031210,NM_006020	chr14,chr14	+,-	C14orf156,ALKBH1	136,118
chr1:16939880-16940137	chr1	+	16939923	16940177	True	NR_027504,NM_017940	chr1,chr1	+,-	MST1P2,NBPF1	31891,41
chr16:67142470-67143048	chr16	+	67142622	67142976	True	NM_025187,NM_033309	chr16,chr16	+,-	C16orf70,B3GNT9	938,41978
chr8:81082504-81083507	chr8	+	81082773	81083213	True	NM_005079,NM_001025253,NM_001105539	chr8,chr8,chr8	-,-,+	TPD52,TPD52,ZBTB10	673,673,315234
chr5:95159824-95160057	chr5	+	95159843	95160055	True	NR_026936,NM_002064,NM_001118890	chr5,chr5,chr5	+,-,-	C5orf27,GLRX,GLRX	27880,-1266,-1266
chr11:44331758-44332126	chr11	+	44331892	44331976	True	NM_021926,NM_000401	chr11,chr11	-,+	ALX4,EXT2	-176,-214196
chr1:162530802-162531082	chr1	+	162530806	162531054	True	NM_053282,NM_003115	chr1,chr1	-,+	SH2D1B,UAP1	-148878,241
chr1:115631655-115631922	chr1	+	115631765	115631877	True	NM_000549,NM_005725	chr1,chr1	+,-	TSHB,TSPAN2	-59401,294
chr10:93236361-93236652	chr10	+	93236400	93236534	True	NR_024467,NM_182765	chr10,chr10	-,+	LOC100188947,HECTD2	134733,-66355
chr13:31735219-31735459	chr13	+	31735261	31735390	True	NM_194318,NM_006644	chr13,chr13	+,-	B3GALTL,HSPH1	38721,777
chr3:49727382-49728614	chr3	+	49727381	49728328	True	NM_022064,NM_020998	chr3,chr3	+,-	RNF123,MST1	-442,-1185
chr17:30815229-30815868	chr17	+	30815331	30815773	True	NM_003885,NM_022344	chr17,chr17	+,-	CDK5R1,C17orf75	-1277,-146142
chr2:8821420-8822142	chr2	+	8821428	8822112	True	NM_020738,NM_002166	chr2,chr2	-,+	KIDINS220,ID2	155693,0
chr8:18867752-18868420	chr8	+	18867830	18868308	True	NM_001174160,NM_015310	chr8,chr8	+,-	SH2D4A,PSD3	302772,2938
chr14:94660752-94661098	chr14	+	94660751	94661153	True	NM_032036,NM_058237	chr14,chr14	-,+	IFI27L2,PPP4R4	-64794,-20155
chr12:57826641-57827786	chr12	+	57826841	57827590	True	NM_005538,NM_001080156	chr12,chr12	+,-	INHBC,ARHGAP9	952,44190
chr10:75489174-75489783	chr10	+	75489292	75489650	True	NR_026592,NM_004922	chr10,chr10	-,+	BMS1P4,SEC24C	672,14480
chr1:153931892-153932936	chr1	+	153931924	153932725	True	NM_014437,NM_130898,NM_181715	chr1,chr1,chr1	-,+,-	SLC39A1,CREB3L4,CRTC2	7513,7671,-792
chr1:9005911-9006187	chr1	+	9005910	9006100	True	NM_001215,NM_001428	chr1,chr1	+,-	CA6,ENO1	-39,-66759
chr5:154227138-154227490	chr5	+	154227339	154227410	True	NM_004779,NM_032385	chr5,chr5	+,-	CNOT8,C5orf4	10787,2864
chr6:71276575-71276855	chr6	+	71276650	71276818	True	NM_145267,NM_001851	chr6,chr6	+,-	C6orf57,COL9A1	-76,-263864
chr15:41624368-41624571	chr15	+	41624384	41624548	True	NM_007280,NM_018454,NM_001129897,NM_016359	chr15,chr15,chr15,chr15	-,+,+,+	OIP5,NUSAP1,NUSAP1,NUSAP1	321,377,377,377
chr22:39713722-39714410	chr22	+	39713824	39714308	True	NM_001033853,NM_000967,NR_000028,NR_002439,NR_000026,NR_000027,NM_145731	chr22,chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,-,-,+	RPL3,RPL3,SNORD83B,SNORD43,RNU86,SNORD83A,SYNGR1	1412,1412,-3908,860,-923,-2512,31645
chr13:28365563-28366047	chr13	+	28365619	28366093	True	NM_153371,NM_145657	chr13,chr13	-,+	LNX2,GSX1	-170899,686
chr17:34133045-34135039	chr17	+	34133407	34134878	True	NM_001032278,NM_139215,NM_003487	chr17,chr17,chr17	-,+,+	MMP28,TAF15,TAF15	-10767,1609,1609
chr2:137085618-137086105	chr2	+	137085639	137086147	True	NM_003467,NM_014607	chr2,chr2	-,+	CXCR4,UBXN4	-209914,-586512
chr2:208391778-208393158	chr2	+	208391807	208392929	True	NM_004379,NM_134442,NM_145280	chr2,chr2,chr2	+,+,-	CREB1,CREB1,METTL21A	1686,1686,96817
chr22:50763012-50763509	chr22	+	50763146	50763472	True	NM_001001794,NM_014678	chr22,chr22	-,+	FAM116B,PPP6R2	2067,18287
chr5:70748568-70750166	chr5	+	70748568	70750192	True	NM_018429,NR_033968	chr5,chr5	+,-	BDP1,LOC100049076	1249,-193446
chr8:6421661-6422572	chr8	+	6421947	6422603	True	NM_001118888,NM_018361,NM_001147,NM_001118887	chr8,chr8,chr8,chr8	-,+,-,-	ANGPT2,AGPAT5,ANGPT2,ANGPT2	-1163,143274,-1163,-1163
chr4:7940085-7940504	chr4	+	7940111	7940465	True	NM_001134647,NR_026892,NM_198595	chr4,chr4,chr4	-,+,-	AFAP1,AFAP1-AS1,AFAP1	1238,-184348,1238
chr16:88704197-88704811	chr16	+	88704231	88704765	True	NM_013278,NM_000101	chr16,chr16	+,-	IL17C,CYBA	235,12742
chr7:100075548-100075814	chr7	+	100075593	100075653	True	NM_030935,NM_173564	chr7,chr7	-,+	TSC22D4,C7orf51	1299,5896
chrX:129474032-129474265	chrX	+	129474089	129474311	True	NM_022810,NM_003951,NM_178471	chrX,chrX,chrX	+,+,-	SLC25A14,SLC25A14,GPR119	-94,-94,45250
chr10:105156827-105157283	chr10	+	105156826	105157150	True	NM_014976,NR_031707,NM_032747	chr10,chr10,chr10	+,-,-	PDCD11,MIR1307,USMG5	-467,-2668,-603
chr1:20449973-20451419	chr1	+	20450683	20451445	True	NM_022819,NM_012400	chr1,chr1	+,-	PLA2G2F,PLA2G2D	14377,-4675
chr1:31839256-31840054	chr1	+	31839286	31840092	True	NM_001199038,NM_004102	chr1,chr1	+,-	SERINC2,FABP3	42319,5881
chr6:47619518-47621509	chr6	+	47619643	47621353	True	NM_153839,NM_014452	chr6,chr6	+,-	GPR111,TNFRSF21	2972,-341963
chr9:89627897-89628591	chr9	+	89628201	89628621	True	NR_027471,NM_001001709	chr9,chr9	-,+	LOC440173,C9orf170	28470,134937
chr11:112052197-112053533	chr11	+	112052224	112052628	True	NM_001562,NM_031938,NM_001037290	chr11,chr11,chr11	-,+,+	IL18,BCO2,BCO2	-17384,-6067,-5186
chr15:85922288-85923162	chr15	+	85922864	85923200	True	NM_007200,NR_031682,NM_006738	chr15,chr15,chr15	+,-,+	AKAP13,MIR1276,AKAP13	670,390659,670
chr1:77746680-77747321	chr1	+	77746711	77747322	True	NM_012093,NM_174858,NM_005482	chr1,chr1,chr1	+,+,-	AK5,AK5,PIGK	964,339,-61579
chrX:151143715-151144688	chrX	+	151143769	151144655	True	NM_004961,NM_001011550	chrX,chrX	-,+	GABRE,MAGEA4	-618,-57060
chr20:21378547-21380063	chr20	+	21378696	21379938	True	NM_012255,NM_033176	chr20,chr20	+,-	XRN2,NKX2-4	-94805,-649
chr3:131079607-131080577	chr3	+	131079972	131080588	True	NR_002949,NR_002985,NR_027766	chr3,chr3,chr3	+,-,+	NUDT16P1,SNORA58,NUDT16P1	100,117539,129
chr10:121399928-121400285	chr10	+	121399928	121400062	True	NM_004281,NM_003252	chr10,chr10	+,-	BAG3,TIAL1	10819,-43387
chr1:40632512-40634208	chr1	+	40632824	40633615	True	NM_001142604,NM_012421	chr1,chr1	-,+	PPT1,RLF	-69682,-5842
chr10:35537074-35537291	chr10	+	35537121	35537246	True	NM_001198777,NM_181698	chr10,chr10	-,+	CUL2,CCNY	-157551,-1219
chr17:18574717-18575495	chr6	-	108984934	108985499	False	NR_033376,NM_001199934	chr6,chr6	+,-	NCRNA00222,SESN1	87357,344742
chr17:18574717-18575495	chr17	+	18574775	18575477	True	NM_001037330,NR_026718	chr17,chr17	+,-	TRIM16L,FOXO3B	49924,1067
chr17:7338696-7338954	chr17	+	7338753	7338971	True	NM_152766,NM_000747,NM_178518,NM_175734,NM_004112	chr17,chr17,chr17,chr17,chr17	-,+,+,+,+	C17orf61,CHRNB1,TMEM102,C17orf74,FGF11	-31303,9434,-42,-9869,3717
chrX:153285652-153285889	chrX	+	153285731	153285825	True	NR_031757,NM_001569,NR_036174,NM_001025242,NM_001025243	chrX,chrX,chrX,chrX,chrX	-,-,+,-,-	MIR718,IRAK1,MIR3202-1,IRAK1,IRAK1	-291,-389,-39234,-389,-389
chr11:46259192-46259399	chr11	+	46259283	46259349	True	NM_016621,NM_052854	chr11,chr11	-,+	PHF21A,CREB3L1	-116298,39878
chr15:78857084-78857550	chr15	+	78857089	78857591	True	NM_001166694,NM_000745	chr15,chr15	-,+	CHRNA3,CHRNA5	56096,270
chr6:14831339-14831995	chr6	+	14831340	14831982	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	414544,831357
chrX:47095605-47096687	chrX	+	47095656	47096645	True	NR_024235,NM_004651	chrX,chrX	-,+	NDUFB11,USP11	-91047,-3405
chr16:16314472-16315532	chr16	+	16314780	16315364	True	NM_001171,NM_001079528,NM_001004067	chr16,chr16,chr16	-,-,+	ABCC6,ABCC6,NOMO3	2014,2014,11024
chr16:16314472-16315532	chr16	-	18584569	18585107	False	NR_003569,NM_173614	chr16,chr16	+,-	ABCC6P1,NOMO2	-2052,-11135
chr16:16314472-16315532	chr16	+	14916017	14916601	False	NR_023387,NM_014287	chr16,chr16	-,+	ABCC6P2,NOMO1	2008,11041
chr10:71036337-71037296	chr10	+	71036598	71036991	True	NM_001057,NM_033497,NM_033500,NM_033498	chr10,chr10,chr10,chr10	-,+,+,+	TACR2,HK1,HK1,HK1	139742,-6904,-6904,-6904
chr11:128452929-128453195	chr11	+	128452945	128453125	True	NM_001167681,NM_001143820	chr11,chr11	+,-	FLI1,ETS1	110685,4378
chr17:40170009-40172006	chr17	+	40170019	40171905	True	NM_003315,NM_001144928,NM_001144766,NM_001144929,NR_029431,NM_017595,NM_001144927,NM_001001349	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,-,+,-,+,+,+	DNAJC7,NKIRAS2,DNAJC7,NKIRAS2,DNAJC7,NKIRAS2,NKIRAS2,NKIRAS2	-304,181,-836,181,-304,181,181,-476
chr17:14207621-14208361	chr17	+	14207792	14208282	True	NR_026880,NM_006041,NM_001007530	chr17,chr17,chr17	+,+,-	MGC12916,HS3ST3B1,CDRT15	-792,-3343,-67642
chr20:48729778-48730216	chr20	+	48730009	48730211	True	NM_021988,NM_001032288,NM_022442,NM_005194,NM_199144	chr20,chr20,chr20,chr20,chr20	-,-,-,+,-	UBE2V1,UBE2V1,UBE2V1,CEBPB,UBE2V1	2333,-299,2330,77164,2333
chr14:65746514-65746809	chr14	+	65746588	65746806	True	NM_178155,NR_024334	chr14,chr14	+,-	FUT8,LOC645431	131033,132579
chr19:44173383-44173683	chr19	+	44173575	44173669	True	NM_001005376,NM_001005377,NM_019612,NM_002659	chr19,chr19,chr19,chr19	-,-,+,-	PLAUR,PLAUR,IRGC,PLAUR	885,885,46544,885
chr9:88550977-88551585	chr9	+	88551190	88551590	True	NM_024635,NM_016548	chr9,chr9	+,-	NAA35,GOLM1	4466,162970
chr3:40351801-40352248	chr3	+	40351898	40352286	True	NM_005875,NR_033965	chr3,chr3	+,-	EIF1B,FLJ33065	-788,-709
chr19:56458315-56459101	chr19	+	56458819	56459147	True	NM_176810,NM_176811	chr19,chr19	-,+	NLRP13,NLRP8	-15117,50
chr1:206537944-206538339	chr1	+	206538007	206538290	True	NM_015326,NM_001201478	chr1,chr1	+,-	SRGAP2,EIF2D	-21859,247671
chr1:206537944-206538339	chr1	+	144075045	144075328	False	NM_207418,NR_034178	chr1,chr1	-,+	FAM72D,SRGAP2P2	-161902,-159349
chr1:206537944-206538339	chr1	+	121087873	121088156	False	NR_003955,NM_001017986	chr1,chr1	+,-	EMBP1,FCGR1B	172753,-151929
chr19:12252450-12253920	chr19	+	12252783	12253912	True	NM_003437,NM_001203250,NM_021143	chr19,chr19,chr19	+,-,-	ZNF136,ZNF20,ZNF20	19959,-1561,-1561
chr19:53286773-53287134	chr19	+	53286902	53286973	True	NM_198457,NR_023311	chr19,chr19	-,+	ZNF600,ZNF137P	3118,-187016
chr21:15653719-15654980	chr21	+	15654229	15654817	True	NR_003088,NR_003087,NM_198996	chr21,chr21,chr21	+,+,-	ABCC13,ABCC13,LIPI	-8160,-8160,-74975
chr15:90221488-90222553	chr15	+	90221829	90222534	True	NM_001145311,NM_020212,NM_002666	chr15,chr15,chr15	-,+,-	PLIN1,WDR93,PLIN1	165,11493,165
chr20:47663580-47664204	chr20	+	47663670	47663884	True	NM_001037328,NM_001316	chr20,chr20	-,+	STAU1,CSE1L	141070,-883
chr19:708034-708396	chr19	+	708041	708367	True	NM_214710,NM_002579,NM_001040134	chr19,chr19,chr19	-,+,+	PRSS57,PALM,PALM	-12580,585,585
chr22:46402554-46402777	chr22	+	46402595	46402781	True	NM_058238,NR_027240	chr22,chr22	-,+	WNT7B,LOC730668	-29587,-150
chr9:19406684-19407269	chr9	+	19406683	19407132	True	NM_001010,NM_001010887	chr9,chr9	-,+	RPS6,ACER2	-26448,1792
chr1:150266290-150266507	chr1	+	150266289	150266544	True	NM_018997,NM_016022,NM_031901	chr1,chr1,chr1	+,-,+	MRPS21,APH1A,MRPS21	-71,-24757,-71
chr21:46496187-46497300	chr21	+	46496351	46497058	True	NM_001112,NM_001160230,NR_027292,NM_015834,NR_027674,NR_027672,NR_027673,NM_015833	chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21	+,+,-,+,+,+,+,+	ADARB1,ADARB1,C21orf122,ADARB1,ADARB1,ADARB1,ADARB1,ADARB1	-1910,-1910,-3225,-1910,-1910,-1910,-1910,-1910
chr15:89182358-89182656	chr15	+	89182431	89182705	True	NR_026645,NM_002201	chr15,chr15	-,+	DET1,ISG20	-92519,-443
chr17:39538441-39539362	chr17	+	39538483	39539210	True	NM_030975,NM_021013	chr17,chr17	+,-	KRTAP9-9,KRT34	-126898,-115
chr12:125549828-125550047	chr12	+	125549830	125550052	True	NM_032656,NM_023928	chr12,chr12	-,+	DHX37,AACS	-76163,34
chr8:22552192-22552393	chr8	+	22552265	22552427	True	NM_021174,NM_001199880,NM_004430,NM_001199881	chr8,chr8,chr8,chr8	+,-,-,-	KIAA1967,EGR3,EGR3,EGR3	-89777,-2363,-1450,-2172
chr17:36240508-36241557	chr17	+	36241202	36241569	True	NM_032258,NR_024178	chr17,chr17	+,-	TBC1D3F,LOC284100	42390,2845
chrX:102965496-102966132	chrX	+	102965555	102966093	True	NM_001024452,NM_182541	chrX,chrX	-,+	GLRA4,TMEM31	17509,16
chr2:202043258-202044548	chr2	+	202043262	202044357	True	NM_001230,NM_032977,NM_032974,NM_173822	chr2,chr2,chr2,chr2	+,+,+,-	CASP10,CASP10,CASP10,FAM126B	3263,3263,3263,-106870
chr22:16414748-16415012	chr22	+	16414862	16415050	True	NM_001005239,NR_001591	chr22,chr22	-,+	OR11H1,psiTPTE22	34804,667750
chr22:16414748-16415012	chr14	-	19412341	19412529	False	NM_001145442,NM_001013354	chr14,chr14	-,+	POTEM,OR11H12	607793,-34798
chr18:13140024-13140299	chr18	+	13140096	13140332	True	NM_002828,NM_181481	chr18,chr18	-,+	PTPN2,C18orf1	-255762,78453
chr17:20373013-20374162	chr17	+	20373347	20374059	True	NM_001190790,NM_001042685	chr17,chr17	+,-	CDRT15L2,LGALS9B	108977,-2499
chr17:20373013-20374162	chr17	+	20604744	20604961	False	NM_001190790,NM_001004306	chr17,chr17	+,-	CDRT15L2,CCDC144NL	-121758,194547
chr17:20373013-20374162	chr17	-	18376884	18377596	False	NR_003554,NM_001040078	chr17,chr17	-,+	LOC220594,LGALS9C	47020,2502
chr16:87968028-87969053	chr16	+	87968225	87969041	True	NM_001173539,NM_001739	chr16,chr16	+,-	BANP,CA5A	15996,1121
chr10:120967585-120967839	chr10	+	120967674	120967866	True	NM_005308,NM_014098	chr10,chr10	+,-	GRK5,PRDX3	-528,-29329
chr4:169425042-169425667	chr4	+	169425072	169425450	True	NM_001012967,NM_001166108,NM_016081	chr4,chr4,chr4	-,+,+	DDX60L,PALLD,PALLD	-23434,-6913,-6913
chr3:32431294-32432138	chr3	+	32431408	32431856	True	NM_181472,NM_017801,NM_138410	chr3,chr3,chr3	+,-,+	CMTM7,CMTM6,CMTM7	1306,112604,1306
chr1:219703209-219704209	chr1	+	219703384	219704112	True	NM_138794,NM_018713	chr1,chr1	+,-	LYPLAL1,SLC30A10	-356249,397931
chr2:128852413-128854269	chr2	+	128852701	128854233	True	NM_024545,NM_020120,NR_027671	chr2,chr2,chr2	-,+,+	SAP130,UGGT1,UGGT1	-67832,-3998,-3970
chr19:38718011-38718832	chr19	+	38718026	38718880	True	NM_001135156,NM_004647,NM_001135155,NM_001166103	chr19,chr19,chr19,chr19	-,-,-,+	DPF1,DPF1,DPF1,SPINT2	1487,-3136,-3136,36217
chr8:126440378-126441381	chr8	+	126440486	126441356	True	NM_014846,NM_025195	chr8,chr8	-,+	KIAA0196,TRIB1	-336425,1206
chr19:7562891-7563917	chr19	+	7563567	7563887	True	NM_198534,NM_080662	chr19,chr19	+,-	C19orf45,PEX11G	-1175,-9662
chr11:121325280-121326324	chr11	+	121325322	121326293	True	NR_029671,NM_003105	chr11,chr11	-,+	MIR125B1,SORL1	644314,-2461
chr2:131356962-131358035	chr2	+	131357196	131358047	True	NR_027314,NM_032545,NM_001079530	chr2,chr2,chr2	+,-,-	LOC150527,CFC1,CFC1B	-28827,-114,-43
chr2:131356962-131358035	chr2	-	131277870	131278721	False	NR_027314,NM_032545,NM_001079530	chr2,chr2,chr2	-,+,+	LOC150527,CFC1,CFC1B	28799,114,43
chr8:38963831-38964324	chr8	+	38963988	38964367	True	NM_078473,NM_145004	chr8,chr8	-,+	TM2D2,ADAM32	-109947,682
chrX:152987275-152987720	chrX	+	152987646	152987768	True	NM_001139441,NM_001139457,NM_000033,NM_005745,NR_024450	chrX,chrX,chrX,chrX,chrX	-,-,+,-,-	BCAP31,BCAP31,ABCD1,BCAP31,BCAP31	1864,1831,2554,2120,2483
chr12:4491220-4492896	chr12	+	4491232	4492804	True	NM_020638,NM_020375	chr12,chr12	-,+	FGF23,C12orf5	-2338,-60924
chr9:16870999-16871299	chr9	+	16871034	16871140	True	NM_017637,NM_001114395	chr9,chr9	-,+	BNC2,CNTLN	-248,263897
chr3:57991574-57991808	chr3	+	57991600	57991734	True	NM_001164317,NM_001457,NM_004944,NM_001164318,NM_001164319	chr3,chr3,chr3,chr3,chr3	+,+,-,+,+	FLNB,FLNB,DNASE1L3,FLNB,FLNB	2392,2392,208714,2392,2392
chr19:18668473-18668674	chr19	+	18668491	18668631	True	NM_001171949,NM_001171948,NM_012181,NM_024069	chr19,chr19,chr19,chr19	+,+,-,+	C19orf50,C19orf50,FKBP8,C19orf50	5,5,-14108,5
chr11:9405142-9405608	chr11	+	9405275	9405497	True	NM_006391,NM_001165030	chr11,chr11	+,-	IPO7,TMEM41B	671,-68979
chr19:43030401-43030920	chr19	+	43030412	43030914	True	NM_001410,NM_001184816,NM_001184815,NM_001184813,NM_001024912,NM_001712	chr19,chr19,chr19,chr19,chr19,chr19	+,-,-,-,-,-	MEGF8,CEACAM1,CEACAM1,CEACAM1,CEACAM1,CEACAM1	-200702,1797,1797,1797,1797,1797
chr22:32023856-32024867	chr22	+	32024059	32024693	True	NM_001007188,NM_014338	chr22,chr22	+,-	DEPDC5,PISD	125375,2167
chr1:153587369-153587650	chr1	+	153587380	153587556	True	NM_080388,NM_006271,NM_020672	chr1,chr1,chr1	-,+,-	S100A16,S100A1,S100A14	-1866,13316,1284
chr10:12872751-12873647	chr10	+	12872856	12873682	True	NR_027322,NM_031455	chr10,chr10	+,-	LOC283070,CCDC3	1450,170072
chr8:37793853-37795413	chr8	+	37794029	37795220	True	NM_004095,NM_152413	chr8,chr8	+,-	EIF4EBP1,GOT1L1	92799,2478
chr12:22786296-22787634	chr12	+	22786319	22787385	True	NM_014802,NM_018638,NM_001039481	chr12,chr12,chr12	-,+,+	KIAA0528,ETNK1,ETNK1	-88867,-8295,-8295
chr9:35041018-35041543	chr9	+	35041414	35041478	True	NM_001040410,NM_001040411,NM_001040412,NM_007126,NM_203299	chr9,chr9,chr9,chr9,chr9	+,+,+,-,+	C9orf131,C9orf131,C9orf131,VCP,C9orf131	744,-371,-371,31311,744
chr18:77723698-77724067	chr18	+	77723767	77724039	True	NM_001136180,NM_025078	chr18,chr18	+,-	HSBP1L1,PQLC1	542,-12114
chr18:2848086-2848703	chr18	+	2848311	2848733	True	NR_026659,NM_032048	chr18,chr18	-,+	LOC727896,EMILIN2	97938,-1335
chr17:56065806-56066133	chr17	+	56065942	56066182	True	NM_007146,NM_080677	chr17,chr17	-,+	VEZF1,DYNLL2	-327,94597
chr16:8961511-8961912	chr16	+	8961528	8961886	True	NM_014316,NM_001042476,NM_000303	chr16,chr16,chr16	-,-,+	CARHSP1,CARHSP1,PMM2	1027,412,-69909
chr2:165679485-165680611	chr2	+	165679615	165680620	True	NM_001040142,NM_014900	chr2,chr2	+,-	SCN2A,COBLL1	415291,17361
chr17:74723903-74724209	chr17	+	74723963	74724089	True	NR_036608,NM_001080510,NR_030366,NM_001081461,NM_003016,NM_024311,NM_001195427,NM_015167	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,-,-,-,+,-,-	SRSF2,METTL23,MIR636,JMJD6,SRSF2,MFSD11,SRSF2,JMJD6	9454,-1067,8591,-1082,9454,9693,9454,-1082
chr22:21336338-21336544	chr22	+	21336364	21336592	True	NM_001008695,NM_006767	chr22,chr22	-,+	THAP7,LZTR1	19862,33
chr1:169849993-169851213	chr1	+	169850189	169851035	True	NM_020423,NM_018186	chr1,chr1	-,+	SCYL3,C1orf112	12098,-85696
chr12:115122026-115122345	chr12	+	115122032	115122184	True	NM_138432,NM_016569,NM_005996	chr12,chr12,chr12	+,-,-	SDSL,TBX3,TBX3	-1261867,-63,-63
chr11:47289812-47290144	chr11	+	47289850	47290176	True	NM_130472,NM_130473,NM_130470,NM_130471,NM_130476,NM_130474,NM_130475,NM_003682,NM_001131064,NM_001135943,NM_001135944	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,+,+,+,-,+,+	MADD,MADD,MADD,MADD,MADD,MADD,MADD,MADD,ACP2,MADD,MADD	1022,1022,750,1022,1494,1022,1494,1022,-19393,1494,1022
chr22:36112410-36112962	chr22	+	36112674	36112916	True	NM_030642,NM_203377	chr22,chr22	+,-	APOL5,MB	1002,-93273
chr19:38722846-38723520	chr19	+	38722846	38723520	True	NM_001135156,NM_004647,NM_001135155,NM_001166103	chr19,chr19,chr19,chr19	-,-,-,+	DPF1,DPF1,DPF1,SPINT2	-2529,-7956,-7956,31577
chr8:70745576-70746189	chr8	+	70745721	70746167	True	NM_001128206,NM_030958,NM_001146008,NM_001146009	chr8,chr8,chr8,chr8	+,-,-,-	SULF1,SLCO5A1,SLCO5A1,SLCO5A1	-340744,1182,-96,-317
chr11:63384787-63385484	chr11	+	63384797	63385239	True	NM_006054,NM_001128203,NM_007069	chr11,chr11,chr11	+,-,-	RTN3,PLA2G16,PLA2G16	63682,-2856,-2888
chr3:52093892-52094615	chr3	+	52094069	52094585	True	NM_001198898,NR_027331,NM_001947	chr3,chr3,chr3	+,-,-	ACY1,C3orf74,DUSP7	-76820,4593,-3608
chr5:60240936-60241322	chr5	+	60241158	60241350	True	NM_000082,NM_174889	chr5,chr5	-,+	ERCC8,NDUFAF2	-253,-253
chr17:48796898-48797131	chr17	+	48796957	48797129	True	NM_052855,NM_016424,NM_006107	chr17,chr17,chr17	-,+,+	ANKRD40,LUC7L3,LUC7L3	-11687,-82,-82
chr18:3588700-3590438	chr18	+	3588822	3590464	True	NR_024101,NM_001003809	chr18,chr18	+,-	FLJ35776,DLGAP1	3647,254882
chr22:38865383-38865623	chr22	+	38865404	38865544	True	NM_016657,NM_006855,NM_152868	chr22,chr22,chr22	+,+,-	KDELR3,KDELR3,KCNJ4	-1372,-1372,-14201
chrX:153044873-153045225	chrX	+	153045125	153045243	True	NM_014370,NM_001170760,NM_001170761,NM_004135	chrX,chrX,chrX,chrX	+,+,+,-	SRPK3,SRPK3,SRPK3,IDH3G	1212,1212,1212,14774
chr19:57022144-57022362	chr19	+	57022227	57022362	True	NM_020813,NR_030740	chr19,chr19	+,-	ZNF471,ZNF667	-3066,-33457
chr5:133967814-133968278	chr5	+	133967960	133968071	True	NM_021982,NM_016103,NM_001033503	chr5,chr5,chr5	+,-,-	SEC24A,SAR1B,SAR1B	16407,512,512
chr9:130496809-130497154	chr9	+	130496868	130497088	True	NM_130459,NM_144965,NM_001085347,NM_001134430,NM_001134431	chr9,chr9,chr9,chr9,chr9	-,+,-,-,-	TOR2A,TTC16,TOR2A,TOR2A,TOR2A	566,-18561,566,566,566
chr11:73587030-73588022	chr11	+	73587320	73587986	True	NM_025155,NM_016565	chr11,chr11	+,-	PAAF1,CHCHD8	46,-46
chr12:122232001-122232248	chr12	+	122232077	122232271	True	NM_015048,NM_019034,NR_002809	chr12,chr12,chr12	+,-,-	SETD1B,RHOF,LOC338799	10366,-483,9169
chr9:100743760-100744651	chr9	+	100743769	100744610	True	NM_018437,NM_006401	chr9,chr9	-,+	HEMGN,ANP32B	-36635,878
chr12:53075809-53076787	chr12	+	53075896	53076743	True	NM_199187,NM_006121	chr12,chr12	+,-	KRT18,KRT1	265911,-1705
chr10:11631044-11631867	chr10	+	11631061	11631874	True	NM_014688,NM_024693	chr10,chr10	-,+	USP6NL,ECHDC3	21862,152481
chr1:28417248-28418720	chr1	+	28417270	28418372	True	NR_027268,NM_018053,NM_001990	chr1,chr1,chr1	-,+,-	LOC653566,XKR8,EYA3	4747,-130826,-2122
chr14:50474010-50475990	chr14	+	50474042	50476005	True	NM_001012706,NM_001663	chr14,chr14	-,+	C14orf182,ARF6	-110,-114357
chr5:79598912-79599475	chr5	+	79599044	79599435	True	NM_032567,NR_004845	chr5,chr5	+,-	SPZ1,LOC644936	16354,-2747
chr22:44289347-44289574	chr22	+	44289380	44289622	True	NM_001177675,NM_025225,NM_138814	chr22,chr22,chr22	-,+,-	PNPLA5,PNPLA3,PNPLA5	-1487,29996,-1487
chr8:107782408-107783252	chr8	+	107782520	107783123	True	NM_001198535,NM_139166	chr8,chr8	+,-	OXR1,ABRA	-44238,-48
chr16:30569995-30570650	chr16	+	30570006	30570503	True	NM_001172679,NM_002209,NM_033410	chr16,chr16,chr16	-,+,-	ZNF764,ITGAL,ZNF764	-364,-86074,-364
chr2:159828705-159830525	chr2	+	159828945	159830456	True	NM_152528,NM_001145909,NM_033394	chr2,chr2,chr2	-,+,+	WDSUB1,TANC1,TANC1	312660,-3850,-3850
chr3:184033215-184033630	chr3	+	184033276	184033608	True	NM_004953,NM_198244,NM_198242,NM_198241,NM_001194946,NM_001194947,NM_001171087,NR_003055,NM_182917	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,+,+,-,+,+	EIF4G1,EIF4G1,EIF4G1,EIF4G1,EIF4G1,EIF4G1,CLCN2,SNORD66,EIF4G1	4492,-1044,-1044,-1044,-1044,-1044,45833,9875,-375
chr12:62586222-62586490	chr12	+	62586275	62586487	True	NM_178539,NM_006313	chr12,chr12	-,+	FAM19A2,USP15	114,67699
chr7:138147773-138148780	chr7	+	138147989	138148703	True	NM_174959,NM_015905,NM_003852	chr7,chr7,chr7	-,+,+	SVOPL,TRIM24,TRIM24	200324,-2961,-2961
chr10:90566739-90567858	chr10	+	90566930	90567736	True	NM_144590,NM_001128215	chr10,chr10	-,+	ANKRD22,LIPM	44054,-4507
chr3:142612800-142613013	chr3	+	142612939	142613006	True	NM_013363,NM_001080415	chr3,chr3	-,+	PCOLCE2,U2SURP	-4894,107365
chrX:119029115-119030227	chrX	+	119029704	119030176	True	NM_178813,NM_006978,NM_001008535,NM_001008534	chrX,chrX,chrX,chrX	+,-,+,+	AKAP14,RNF113A,AKAP14,AKAP14	-34,-23913,-34,-34
chr17:71642096-71643761	chr17	+	71642111	71643663	True	NM_001144952,NM_017941	chr17,chr17	-,+	SDK2,C17orf80	-1884,-413386
chrX:72990030-72990241	chrX	+	72990029	72990243	True	NR_001564,NR_003255	chrX,chrX	-,+	XIST,TSIX	82395,21796
chr1:20984692-20985016	chr1	+	20984702	20985050	True	NM_032409,NM_005216	chr1,chr1	+,-	PINK1,DDOST	-24805,3037
chr2:73518895-73519225	chr2	+	73518906	73519168	True	NM_001965,NR_029403	chr2,chr2	-,+	EGR4,CCT7	1711,-57593
chr19:7766472-7767073	chr19	+	7766481	7767099	True	NM_001042461,NM_002002	chr19,chr19	+,-	TRAPPC5,FCER2	-20768,-17
chr8:57112711-57112961	chr8	+	57112795	57112977	True	NM_001114634,NM_001011667	chr8,chr8	-,+	PLAG1,CHCHD7	10932,11337
chr13:29294710-29295600	chr13	+	29294882	29295219	True	NM_181785,NM_001135919,NM_015932	chr13,chr13,chr13	-,-,+	SLC46A3,SLC46A3,POMP	-1732,-1732,-61799
chr1:38453259-38454683	chr1	+	38453418	38454638	True	NM_016037,NM_006802	chr1,chr1	+,-	UTP11L,SF3A3	23745,1181
chr22:21211776-21212384	chr22	+	21211781	21212411	True	NM_058004,NM_004782	chr22,chr22	-,+	PI4KA,SNAP29	709,880
chr14:55464551-55465091	chr14	+	55464936	55465014	True	NM_001008396,NM_080867	chr14,chr14	-,+	WDHD1,SOCS4	28869,28829
chr10:72164890-72166022	chr10	+	72164961	72165714	True	NM_018239,NM_004096	chr10,chr10	-,+	LRRC20,EIF4EBP2	-22579,-1151
chr1:167067539-167068004	chr1	+	167067866	167068050	True	NM_005814,NM_001080426	chr1,chr1	-,+	GPA33,DUSP27	-7998,-3830
chr6:26520791-26521222	chr6	+	26520822	26521263	True	NR_026790,NM_024639	chr6,chr6	+,-	HCG11,ZNF322A	670,138750
chr3:97708872-97709350	chr3	+	97708876	97709174	True	NM_153182,NM_054106	chr3,chr3	-,+	MINA,OR5AC2	-17581,96842
chr19:49110176-49110397	chr19	+	49110283	49110383	True	NM_017708,NM_133498	chr19,chr19	-,+	FAM83E,SPACA4	6361,-334
chrY:3550896-3551626	chrY	+	3550962	3551518	True	NM_003140,NM_139214	chrY,chrY	-,+	SRY,TGIF2LY	-895170,-103892
chrY:3550896-3551626	chrX	+	89367808	89368365	False	NM_138960,NM_004538	chrX,chrX	+,-	TGIF2LX,NAP1L3	-190925,3560377
chr21:35987782-35989274	chr21	+	35987928	35989171	True	NM_004414,NM_203417,NM_053277	chr21,chr21,chr21	-,-,+	RCAN1,RCAN1,CLIC6	-546,-1183,52516
chr10:22613023-22614333	chr10	+	22613022	22614276	True	NM_005180,NR_036533,NM_012071,NM_001204062	chr10,chr10,chr10,chr10	+,-,+,+	BMI1,LOC100499489,COMMD3,COMMD3-BMI1	-2938,112632,-7765,-7765
chr1:203018785-203020549	chr1	+	203019340	203020582	True	NM_015053,NM_002479	chr1,chr1	+,-	PPFIA4,MYOG	230,34845
chr11:76473888-76474431	chr11	+	76473956	76474426	True	NM_015516,NR_024042	chr11,chr11	+,-	TSKU,GUCY2E	19858,-41123
chr15:35590979-35591190	chr15	+	35591022	35591239	True	NR_003144,NR_037507	chr15,chr15	+,-	LOC723972,MIR3942	-61546,73379
chr1:120377815-120378784	chr1	+	120377959	120378785	True	NM_006623,NM_001047980	chr1,chr1	+,-	PHGDH,NBPF7	-123591,9044
chr14:55658104-55658345	chr14	+	55658110	55658326	True	NR_003225,NM_001146015,NM_014750	chr14,chr14,chr14	+,-,-	LGALS3,DLGAP5,DLGAP5	-54460,120,120
chr12:13152768-13153124	chr12	+	13152825	13153065	True	NM_015987,NR_002774	chr12,chr12	-,+	HEBP1,HTR7P1	228,310
chr2:208393577-208393926	chr2	+	208393734	208393892	True	NM_004379,NM_134442,NM_145280	chr2,chr2,chr2	+,+,-	CREB1,CREB1,METTL21A	723,723,95854
chr10:134146218-134146483	chr10	+	134146256	134146476	True	NR_026559,NM_030626,NM_173575,NM_001143757,NM_001143759,NM_001143758	chr10,chr10,chr10,chr10,chr10,chr10	+,+,-,+,+,+	LRRC27,LRRC27,STK32C,LRRC27,LRRC27,LRRC27	4134,-693,-24779,-566,-693,-693
chr1:3815985-3816368	chr1	+	3815989	3816251	True	NR_024455,NM_207356	chr1,chr1	+,-	LOC100133612,C1orf174	716,656
chr14:105191873-105192122	chr14	+	105191929	105192115	True	NM_199165,NM_005163,NM_152328	chr14,chr14,chr14	+,-,+	ADSSL1,AKT1,ADSSL1	4112,67873,-1446
chr17:38256206-38256506	chr17	+	38256299	38256419	True	NM_001012241,NM_021724	chr17,chr17	+,-	MSL1,NR1D1	22370,604
chr16:446716-447086	chr16	+	446777	447017	True	NM_005009,NM_021259,NM_020664	chr16,chr16,chr16	+,-,+	NME4,TMEM8A,DECR2	174,-14827,4840
chr4:94749998-94750329	chr4	+	94750014	94750328	True	NM_005172,NM_014485	chr4,chr4	+,-	ATOH1,HPGDS	-7,513749
chr12:106640240-106640652	chr12	+	106640569	106640670	True	NM_006825,NM_152772	chr12,chr12	-,+	CKAP4,TCP11L2	1094,55910
chr10:102890739-102891033	chr10	+	102890851	102891069	True	NM_005521,NM_001195517,NM_001085398	chr10,chr10,chr10	+,+,-	TLX1,TLX1,TLX1NB	1,1,52
chr8:11195295-11195808	chr8	+	11195340	11195847	True	NM_054028,NR_001578,NM_053279	chr8,chr8,chr8	+,+,-	AMAC1L2,TDH,FAM167A	-6897,1298,128480
chr14:91720694-91721634	chr14	+	91720717	91721591	True	NM_001177676,NR_003709,NM_003485	chr14,chr14,chr14	-,+,-	GPR68,SNORA11B,GPR68	-9865,-127998,-493
chr10:46644124-46644715	chr10	+	46644179	46644696	True	NM_015605,NM_001042390,NM_001042360,NR_027632,NM_001042361,NM_001042391,NM_001042387,NM_001042393,NM_001042392,NM_001042395,NM_001042394,NM_001042397,NM_001042396,NM_001042364,NM_001042365,NM_001042359,NM_001042358,NM_001042362,NM_001042363	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,+,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-	PTPN20B,PTPN20A,PTPN20B,FAM35B,PTPN20B,PTPN20A,PTPN20A,PTPN20A,PTPN20A,PTPN20A,PTPN20A,PTPN20A,PTPN20A,PTPN20B,PTPN20B,PTPN20B,PTPN20B,PTPN20B,PTPN20B	-3176,-3519,-3519,252944,-3519,-3519,-3176,-3519,-3519,-3176,-3519,-3176,-3176,-3176,-3176,-3519,-3519,-3519,-3176
chr10:46644124-46644715	chr10	+	48831100	48831617	False	NM_015605,NM_001042390,NM_001042360,NM_153034,NM_001042361,NM_001042391,NM_001042387,NM_001042393,NM_001042392,NM_001042395,NM_001042394,NM_001042397,NM_001042396,NM_001042364,NM_001042365,NM_001042359,NM_001042358,NM_001042362,NM_001042363	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,+,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-	PTPN20B,PTPN20A,PTPN20B,ZNF488,PTPN20B,PTPN20A,PTPN20A,PTPN20A,PTPN20A,PTPN20A,PTPN20A,PTPN20A,PTPN20A,PTPN20B,PTPN20B,PTPN20B,PTPN20B,PTPN20B,PTPN20B	-3176,-3519,-3519,-476062,-3519,-3519,-3176,-3519,-3519,-3176,-3519,-3176,-3176,-3176,-3176,-3519,-3519,-3519,-3176
chr10:46644124-46644715	chr10	+	49351625	49352142	False	NR_033172,NM_002750	chr10,chr10	-,+	FRMPD2P1,MAPK8	31155,257544
chr4:38809736-38810490	chr4	+	38809886	38810526	True	NM_003263,NM_138389	chr4,chr4	-,+	TLR1,FAM114A1	-3474,58827
chr2:27713515-27715069	chr2	+	27713733	27714685	True	NM_022823,NM_015662,NM_001486	chr2,chr2,chr2	-,-,+	FNDC4,IFT172,GCKR	3491,-1162,5020
chr11:71933644-71934179	chr11	+	71933776	71934222	True	NM_001113534,NM_005169,NM_001567,NM_000803,NM_001113535,NM_001113536	chr11,chr11,chr11,chr11,chr11,chr11	+,-,+,+,+,+	FOLR2,PHOX2A,INPPL1,FOLR2,FOLR2,FOLR2	-6008,21048,1659,-6008,-6008,-6008
chr10:105236985-105237197	chr10	+	105237021	105237249	True	NM_001129742,NM_004210	chr10,chr10	-,+	CALHM3,NEURL	1802,16485
chr11:1037096-1037520	chr11	+	1037225	1037407	True	NM_002457,NM_005961	chr11,chr11	+,-	MUC2,MUC6	37467,-519
chr10:37414955-37415695	chr18	+	14749130	14749180	True	NM_001145029,NM_001137671	chr18,chr18	+,-	ANKRD30B,POTEC	-942,-205531
chr22:30882496-30882827	chr22	+	30882716	30882847	True	NR_001580,NM_016498	chr22,chr22	-,+	SDC4P,MTFP1	-4973,-61156
chr1:165664115-165664922	chr1	+	165664283	165664675	True	NM_000696,NR_036683	chr1,chr1	-,+	ALDH9A1,LOC440700	3283,3311
chr14:102771581-102771848	chr14	+	102771582	102771744	True	NM_014226,NM_018335	chr14,chr14	-,+	RAGE,ZNF839	-51,14351
chr3:38034029-38035390	chr3	+	38034106	38035106	True	NM_015873,NM_001130964	chr3,chr3	+,-	VILL,PLCD1	-29,31222
chr6:143926222-143928208	chr6	+	143926450	143927881	True	NM_001100166,NR_027113,NM_014721	chr6,chr6,chr6	+,-,+	PHACTR2,LOC285740,PHACTR2	1435,-35974,1435
chr17:38375918-38376522	chr17	+	38376068	38376369	True	NM_133264,NM_021724	chr17,chr17	+,-	WIPF2,NR1D1	-545,-119095
chrX:107068748-107068960	chrX	+	107068747	107068994	True	NM_052817,NM_198057,NM_012216	chrX,chrX,chrX	+,-,+	MID2,TSC22D3,MID2	89,-49730,89
chr12:69201912-69202113	chr12	+	69201998	69202162	True	NM_001005502,NM_002392	chr12,chr12	-,+	CPM,MDM2	124867,-78
chr15:26108585-26108815	chr15	+	26108604	26108864	True	NM_024490,NR_001295	chr15,chr15	-,+	ATP10A,SNORD109A	-255,-585165
chr2:95785662-95786586	chr2	+	95786004	95786578	True	NM_031902,NM_001017396	chr2,chr2	-,+	MRPS5,ZNF2	1226,44604
chr19:12405528-12405800	chr19	+	12405533	12405809	True	NM_003437,NM_001164276,NM_016264	chr19,chr19,chr19	+,-,-	ZNF136,ZNF44,ZNF44	-131712,21,21
chr16:3506093-3507048	chr16	+	3506122	3506623	True	NM_001083600,NM_024845,NM_152457	chr16,chr16,chr16	+,+,-	NAT15,NAT15,ZNF597	1368,1368,-12632
chr12:74931260-74931686	chr12	+	74931260	74931710	True	NM_001136262,NM_139136	chr12,chr12	+,-	ATXN7L3B,KCNC2	30,671851
chr3:32023403-32023638	chr3	+	32023411	32023679	True	NM_017784,NM_001174060,NM_001137674	chr3,chr3,chr3	-,-,+	OSBPL10,OSBPL10,ZNF860	-69,-69,-196
chr1:78957482-78958275	chr1	+	78957481	78958273	True	NM_001039585,NM_000959,NM_003902	chr1,chr1,chr1	+,+,-	PTGFR,PTGFR,FUBP1	-804,-804,-512704
chrX:47078985-47080024	chrX	+	47079217	47080001	True	NM_006201,NR_024235,NM_033018,NM_001170460	chrX,chrX,chrX,chrX	+,-,+,+	CDK16,NDUFB11,CDK16,CDK16	-1192,-74608,-1740,2415
chr15:34577174-34578365	chr15	+	34577238	34578168	True	NM_175741,NM_005135,NM_016454	chr15,chr15,chr15	+,-,+	C15orf55,SLC12A6,TMEM85	59897,32903,-60044
chrX:1519589-1519962	chrY	+	1469749	1469873	False	NM_001636,NR_026710,NR_026711	chrY,chrY,chrY	-,+,+	SLC25A6,ASMTL-AS1,ASMTL-AS1	-8710,-376,-376
chrX:1519589-1519962	chrX	+	1519749	1519873	True	NM_001636,NR_026710,NR_026711	chrX,chrX,chrX	-,+,+	SLC25A6,ASMTL-AS1,ASMTL-AS1	-8710,-376,-376
chr3:100211363-100212666	chr3	+	100211521	100212360	True	NM_014820,NM_018004	chr3,chr3	-,+	TOMM70A,TMEM45A	-91296,-110
chr2:86116923-86117285	chr2	+	86116956	86117111	True	NM_003896,NM_032827	chr2,chr2	-,+	ST3GAL5,ATOH8	-799,-136098
chr7:55982638-55984627	chr7	+	55982878	55984424	True	NM_182633,NM_207366	chr7,chr7	+,-	ZNF713,SEPT14	-2607,-52396
chr11:6439519-6439903	chr11	+	6439534	6439748	True	NM_001164,NM_145689,NM_001007593	chr11,chr11,chr11	-,-,+	APBB1,APBB1,SMPD1	602,946,-27941
chr17:40536662-40537381	chr17	+	40536859	40537227	True	NM_001130020,NM_213662,NM_003150,NM_139276	chr17,chr17,chr17,chr17	+,-,-,-	ATP6V0A1,STAT3,STAT3,STAT3	73634,3242,3350,3350
chr10:126431092-126431379	chr10	+	126431100	126431309	True	NM_032182,NM_014661	chr10,chr10	+,-	FAM175B,FAM53B	59044,1672
chr3:99582182-99583398	chr3	+	99582245	99583374	True	NM_014890,NM_032359	chr3,chr3	-,+	FILIP1L,C3orf26	11729,-45619
chr21:43376083-43376418	chr21	+	43376176	43376402	True	NM_015500,NR_027273	chr21,chr21	-,+	C2CD2,C21orf121	-2177,65710
chr12:57645048-57645337	chr12	+	57645072	57645150	True	NM_145064,NM_001166357	chr12,chr12	-,+	STAC3,SHMT2	-103,-20981
chr20:13202756-13203001	chr20	+	13202892	13203012	True	NM_080826,NM_017714	chr20,chr20	+,-	ISM1,TASP1	-525,416621
chr1:214773724-214774910	chr1	+	214773936	214774888	True	NM_016343,NM_005401	chr1,chr1	+,-	CENPF,PTPN14	1643,-48912
chr15:72613206-72614756	chr15	+	72613262	72614637	True	NM_052840,NR_027262,NM_001172684	chr15,chr15,chr15	-,+,-	CELF6,C15orf34,CELF6	-737,53816,-975
chr10:134975538-134975878	chr10	+	134975594	134975890	True	NR_030170,NM_152643	chr10,chr10	-,+	MIR202,KNDC1	85284,-1674
chr3:69787773-69788522	chr3	+	69787791	69788446	True	NM_015123,NM_198159	chr3,chr3	-,+	FRMD4B,MITF	-352361,139
chr1:64055121-64056816	chr1	+	64055552	64056553	True	NM_001172819,NM_014288,NM_002633	chr1,chr1,chr1	+,-,+	PGM1,ITGB3BP,PGM1	2926,-66717,2393
chr22:51178378-51178922	chr22	+	51178499	51178971	True	NM_001003789,NM_001097	chr22,chr22	-,+	RABL2B,ACR	43166,-1898
chr10:103455111-103455336	chr10	+	103455265	103455381	True	NR_036114,NM_022039	chr10,chr10	+,-	MIR3158-1,FBXW4	-94142,-522
chr22:23978793-23979849	chr22	+	23979187	23979774	True	NM_153615,NM_016449	chr22,chr22	+,-	RGL4,C22orf43	53273,-4679
chr15:78214894-78215652	chr15	+	78214898	78215339	True	NM_001101404,NR_027024	chr15,chr15	+,-	SH2D7,LOC645752	169587,3899
chr19:663581-663796	chr19	+	663664	663758	True	NM_005860,NM_194460	chr19,chr19	+,-	FSTL3,RNF126	12630,-431
chr2:38819040-38821036	chr2	+	38819371	38820739	True	NM_001142650,NM_138801,NM_138394	chr2,chr2,chr2	-,+,-	HNRPLL,GALM,HNRPLL	9497,72312,9497
chr9:33239414-33240059	chr9	+	33239595	33240093	True	NM_014471,NM_001172415	chr9,chr9	+,-	SPINK4,BAG1	102,24716
chr20:24448857-24449666	chr20	+	24448903	24449688	True	NM_024893,NM_178311	chr20,chr20	+,-	TMEM90B,GGTLC1	146,-479487
chr3:152010917-152012366	chr3	+	152010959	152012042	True	NR_027038,NM_207293,NM_207295,NM_207294,NM_207297,NM_207296	chr3,chr3,chr3,chr3,chr3,chr3	-,+,+,+,+,+	LOC401093,MBNL1,MBNL1,MBNL1,MBNL1,MBNL1	-23544,5151,5151,5151,5151,5151
chr8:144681947-144682398	chr8	+	144682116	144682394	True	NM_001130053,NM_032378,NM_023078,NM_001130055,NM_001130056,NM_001130057,NM_032862,NM_001960,NM_001195203	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,-,-,+,-,-	EEF1D,EEF1D,PYCRL,EEF1D,EEF1D,EEF1D,TIGD5,EEF1D,EEF1D	-2271,-2271,9440,-2271,-2271,-2558,-2093,-2271,-2271
chr4:9669017-9669217	chr4	+	9669026	9669266	True	NR_031688,NM_000798	chr4,chr4	-,+	MIR548I2,DRD5	-111089,113991
chr14:68286953-68287278	chr14	+	68286957	68287277	True	NM_133510,NM_015346,NM_133509,NM_002877	chr14,chr14,chr14,chr14	+,-,+,+	RAD51L1,ZFYVE26,RAD51L1,RAD51L1	-512,-3651,-512,-512
chr10:134756366-134756627	chr10	+	134756367	134756621	True	NM_173572,NM_001083909	chr10,chr10	-,+	C10orf93,GPR123	-278,144787
chr3:27763615-27763826	chr3	+	27763614	27763856	True	NM_005442,NM_182523	chr3,chr3	-,+	EOMES,CMC1	9,519267
chr13:79961255-79962321	chr13	+	79961358	79962232	True	NM_001161407,NM_022118	chr13,chr13	+,-	NDFIP2,RBM26	93026,17749
chr1:8937526-8937788	chr1	+	8937536	8937646	True	NM_001215,NM_001201483,NM_001428	chr1,chr1,chr1	+,-,-	CA6,ENO1,ENO1	68275,-5901,1555
chr1:244639461-244640591	chr1	+	244639840	244640297	True	NM_173807,NM_001126	chr1,chr1	+,-	C1orf101,ADSS	-15226,-24404
chr20:17548360-17549445	chr20	+	17548607	17549349	True	NM_001011546,NM_001161705,NM_006870	chr20,chr20,chr20	+,-,+	DSTN,BFSP1,DSTN	1249,-9002,1249
chr5:140731047-140731249	chr5	+	140731055	140731275	True	NM_032095,NM_018923,NM_018922,NM_032096,NM_005642,NM_032053,NM_032011,NM_018916,NM_018917	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,-,+,+,+,+	PCDHGB1,PCDHGB2,PCDHGB1,PCDHGB2,TAF7,PCDHGA4,PCDHGA3,PCDHGA3,PCDHGA4	-1278,8427,-1278,8427,-30704,3492,-7505,-7505,3492
chr1:36235526-36236227	chr1	+	36235658	36236014	True	NM_022111,NM_017629,NM_001190481	chr1,chr1,chr1	-,+,-	CLSPN,EIF2C4,CLSPN	-107,37813,-107
chr2:132200178-132200759	chr2	+	132200402	132200696	True	NR_002826,NM_080386	chr2,chr2	-,+	LOC401010,TUBA3D	1821,32969
chr2:132200178-132200759	chr2	-	130988947	130988997	False	NM_025029,NM_207312	chr2,chr2	+,-	MZT2B,TUBA3E	-49497,-32913
chr21:40715386-40716104	chr21	+	40715457	40715911	True	NM_004627,NM_004965	chr21,chr21	+,-	WRB,HMGN1	36301,5188
chr7:151515604-151516211	chr7	+	151515916	151516142	True	NM_145292,NM_001040633	chr7,chr7	+,-	GALNTL5,PRKAG2	137321,-3959
chr1:13329327-13331304	chr1	+	13329332	13330763	True	NM_001013407,NM_001100631,NM_001013692	chr1,chr1,chr1	+,-,-	PRAMEF5,PRAMEF22,PRAMEF3	29055,959,980
chr1:13329327-13331304	chr1	-	13141357	13141998	False	NM_001100631,NM_001013407	chr1,chr1	+,-	PRAMEF22,PRAMEF5	-105866,-23606
chr1:13329327-13331304	chr1	-	13036450	13037881	False	NM_001100631,NM_001010889	chr1,chr1	+,-	PRAMEF22,PRAMEF6	-959,-29044
chr7:151041555-151041940	chr7	+	151041688	151041828	True	NM_198285,NM_016118	chr7,chr7	-,+	WDR86,NUB1	65352,-2887
chr1:10857419-10858123	chr1	+	10857789	10858145	True	NM_001079843,NM_007375,NM_017766	chr1,chr1,chr1	-,+,-	CASZ1,TARDBP,CASZ1	-1082,214533,-1082
chr10:126136852-126137230	chr10	+	126136893	126137283	True	NM_001146340,NM_001167880	chr10,chr10	-,+	NKX1-2,LHPP	1323,13057
chr19:54822689-54823344	chr19	+	54822703	54823319	True	NM_021250,NM_181879,NM_181986,NM_001005367,NM_181985	chr19,chr19,chr19,chr19,chr19	-,-,-,+,-	LILRA5,LILRA5,LILRA5,TTYH1,LILRA5	1140,1099,1099,103285,1099
chr3:39307577-39308883	chr3	+	39307605	39308669	True	NM_005201,NM_001337	chr3,chr3	+,-	CCR8,CX3CR1	62527,12916
chr1:28162292-28162601	chr1	+	28162427	28162646	True	NM_014110,NR_002997,NM_002713,NM_138558,NM_002946	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	PPP1R8,SCARNA1,PPP1R8,PPP1R8,RPA2	-5227,-1567,-5154,-5154,78649
chr12:49728634-49729946	chr12	+	49728832	49729904	True	NM_001008223,NM_005480,NM_024902	chr12,chr12,chr12	-,+,+	C1QL4,TROAP,DNAJC22	1117,-11912,11136
chr2:171792379-171793183	chr2	+	171792378	171793195	True	NM_015530,NM_001136555,NM_001201428	chr2,chr2,chr2	+,-,+	GORASP2,TLK1,GORASP2	-7393,130338,-7481
chr9:32564277-32565892	chr9	+	32564284	32565632	True	NM_001199987,NM_002493,NR_033992,NM_182739	chr9,chr9,chr9,chr9	-,-,+,-	NDUFB6,NDUFB6,LOC100129250,NDUFB6	7600,7600,-12577,7600
chr21:37759305-37759608	chr21	+	37759329	37759415	True	NM_012130,NM_005441	chr21,chr21	-,+	CLDN14,CHAF1B	79360,-1697
chrX:148620640-148620949	chrX	+	148620786	148620864	True	NM_001171909,NM_001171907,NM_178124,NM_001171908,NR_027455	chrX,chrX,chrX,chrX,chrX	+,+,+,+,-	CXorf40A,CXorf40A,CXorf40A,CXorf40A,LOC100131434	5201,1654,1654,1654,498
chr1:3713509-3714035	chr1	+	3713533	3714081	True	NM_020710,NM_001163724	chr1,chr1	-,+	LRRC47,LOC388588	-465,-24232
chr11:61007701-61008410	chr11	+	61007986	61008077	True	NM_014224,NM_152718	chr11,chr11	+,-	PGA5,VWCE	566,54764
chr3:170302362-170303013	chr3	+	170302389	170302832	True	NM_020949,NM_001185056	chr3,chr3	-,+	SLC7A14,CLDN11	1088,-163412
chr3:48264364-48264751	chr3	+	48264579	48264785	True	NM_004345,NM_201567	chr3,chr3	+,-	CAMP,CDC25A	76,-34778
chr11:118393448-118394693	chr11	+	118393473	118394689	True	NM_001144038,NM_001144035,NM_001144034,NM_001144037,NM_001144036,NM_001080441,NM_001168618,NM_032780	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,+,-,+	TMEM25,TMEM25,TMEM25,TMEM25,TMEM25,TTC36,IFT46,TMEM25	7113,7113,7113,7113,7113,3520,42154,7113
chr2:242627864-242628129	chr2	+	242627863	242628023	True	NM_012145,NR_033255,NM_001165031,NM_032329	chr2,chr2,chr2,chr2	-,-,-,+	DTYMK,DTYMK,DTYMK,ING5	-1480,-1480,-1480,13432
chr11:67093592-67095173	chr11	+	67093628	67095042	True	NM_021173,NR_024469	chr11,chr11	-,+	POLD4,LOC100130987	26060,-8380
chr10:94351487-94351826	chr10	+	94351579	94351750	True	NM_004969,NM_004523	chr10,chr10	-,+	IDE,KIF11	-17727,1074
chr9:33505797-33507783	chr9	+	33506504	33507489	True	NR_003667,NR_003573	chr9,chr9	-,+	SUGT1P1,ANXA2P2	3728,116733
chr10:123685578-123686271	chr10	+	123685753	123686283	True	NM_001001976,NM_206861,NM_007041	chr10,chr10,chr10	-,+,-	ATE1,TACC2,ATE1	1313,62405,1313
chr8:92117811-92119217	chr8	+	92117967	92119000	True	NM_001129890,NM_018710	chr8,chr8	+,-	LRRC69,TMEM55A	-3171,-64764
chr1:202176342-202177653	chr1	+	202176500	202177434	True	NM_021636,NR_037664,NM_001017404	chr1,chr1,chr1	+,-,+	LGR6,PTPN7,LGR6	-3646,-45784,5848
chr3:46447553-46448737	chr3	+	46447798	46448774	True	NM_003965,NM_001199149,NM_001130910	chr3,chr3,chr3	+,-,+	CCRL2,LTF,CCRL2	-54,56437,274
chr7:144528496-144529150	chr7	+	144529008	144529171	True	NM_005435,NM_022445,NM_001042482	chr7,chr7,chr7	+,-,-	ARHGEF5,TPK1,TPK1	-476580,4028,4028
chr8:91797596-91798935	chr8	+	91797672	91798966	True	NM_001146273,NM_022351	chr8,chr8	-,+	TMEM64,NECAB1	-139539,4954
chr3:36772767-36774477	chr3	+	36772968	36774369	True	NM_000249,NM_033403	chr3,chr3	+,-	MLH1,DCLK3	260471,7046
chr14:102974363-102974839	chr14	+	102974431	102974839	True	NM_152326,NR_036192	chr14,chr14	-,+	ANKRD9,MIR4309	1339,31141
chrX:38661114-38662160	chrX	+	38661158	38661762	True	NM_001034853,NM_001098790,NM_001098791,NM_021242	chrX,chrX,chrX,chrX	-,+,+,+	RPGR,MID1IP1,MID1IP1,MID1IP1	-474370,-532,-532,1310
chr8:19458708-19460111	chr8	+	19458711	19459998	True	NM_001130518,NM_018142	chr8,chr8	-,+	CSGALNACT1,INTS10	108,214919
chr17:25621113-25621320	chr17	+	25621116	25621280	True	NM_015626,NM_000625,NM_134265	chr17,chr17,chr17	+,-,+	WSB1,NOS2,WSB1	-61,506325,-61
chr12:132196569-132196990	chr12	+	132196573	132197038	True	NM_175066,NM_004592	chr12,chr12	-,+	DDX51,SFSWAP	431892,-989
chr1:1823481-1824049	chr1	+	1823537	1824071	True	NM_002074,NM_138705	chr1,chr1	-,+	GNB1,CALML6	-1011,22194
chr6:54172376-54173355	chr6	+	54172405	54173342	True	NM_014464,NM_001003760	chr6,chr6	+,-	TINAG,KLHL31	-140,-641899
chr1:27023358-27023572	chr1	+	27023382	27023452	True	NM_018066,NM_139135,NM_006015	chr1,chr1,chr1	-,+,+	GPN2,ARID1A,ARID1A	193467,-911,-911
chr20:5110247-5110914	chr20	+	5110511	5110614	True	NM_182649,NM_003818,NM_002592	chr20,chr20,chr20	-,+,-	PCNA,CDS2,PCNA	-9864,-3080,-3243
chr20:23588836-23589137	chr20	+	23588881	23589013	True	NM_001008693,NR_001279	chr20,chr20	-,+	CST9,CSTT	-2271,-89149
chr7:76108611-76109024	chr7	+	76108671	76108861	True	NR_003262,NM_001102596	chr7,chr7	-,+	FDPSL2A,DTX2	-4354,965
chr16:84276055-84276482	chr16	+	84276089	84276511	True	NM_139174,NM_172347	chr16,chr16	+,-	ADAD2,KCNG4	-51420,-2733
chr14:65570472-65570752	chr14	+	65570519	65570585	True	NM_002028,NM_197957,NM_145113,NM_145112,NM_145114,NM_145116,NM_002382	chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,-,-,-,-,-,-	FNTB,MAX,MAX,MAX,MAX,MAX,MAX	-117064,-1292,-1292,-1292,-1292,-1292,-1292
chr13:45992465-45992723	chr13	+	45992581	45992771	True	NM_001204476,NM_001010875	chr13,chr13	+,-	COG3,SLC25A30	46258,-65
chrX:151086714-151087032	chrX	+	151086756	151087048	True	NR_029973,NM_002362,NM_001011548,NM_001011549,NM_001011550	chrX,chrX,chrX,chrX,chrX	-,+,+,+,+	MIR452,MAGEA4,MAGEA4,MAGEA4,MAGEA4	41186,-2098,-5446,-1410,-47
chrX:151086714-151087032	chrX	+	151084037	151086373	False	NR_029973,NM_002362,NM_001011548,NM_001011549,NM_001011550	chrX,chrX,chrX,chrX,chrX	-,+,+,+,+	MIR452,MAGEA4,MAGEA4,MAGEA4,MAGEA4	41861,379,-2727,-735,386
chr11:63706524-63706748	chr11	+	63706523	63706773	True	NM_024771,NM_173587	chr11,chr11	+,-	NAA40,RCOR2	-132,-22207
chr2:10955335-10956299	chr2	+	10955378	10956175	True	NM_005742,NM_144583	chr2,chr2	-,+	PDIA6,ATP6V1C2	-2418,-93662
chr16:75681614-75681888	chr16	+	75681670	75681876	True	NM_005548,NM_001130089,NM_018975	chr16,chr16,chr16	-,-,+	KARS,KARS,TERF2IP	-85,-85,-86
chr15:67359058-67359488	chr15	+	67359198	67359472	True	NM_005902,NM_024666	chr15,chr15	+,-	SMAD3,AAGAB	-1054,187652
chr19:56112037-56112300	chr19	+	56112127	56112337	True	NM_153219,NM_032836	chr19,chr19	+,-	ZNF524,FIZ1	-448,-1234
chr3:57323968-57324224	chr3	+	57323969	57324241	True	NM_012096,NM_001142733	chr3,chr3	+,-	APPL1,ASB14	-62257,2525
chr2:24307739-24308825	chr2	+	24307865	24308829	True	NM_147184,NM_054033,NM_004881,NM_016047	chr2,chr2,chr2,chr2	-,+,-,-	TP53I3,FKBP1B,TP53I3,SF3B14	-210,-35332,-137,-8551
chr21:34100615-34101650	chr21	+	34100890	34101427	True	NM_003895,NM_203446,NM_001160306,NR_024622,NM_001160302	chr21,chr21,chr21,chr21,chr21	-,-,-,+,-	SYNJ1,SYNJ1,SYNJ1,C21orf49,SYNJ1	-539,-539,-640,42983,-640
chr11:20382234-20382566	chr11	+	20382310	20382525	True	NM_001029865,NM_006410,NM_001098521,NM_001098520,NM_001098523,NM_001098522	chr11,chr11,chr11,chr11,chr11,chr11	-,+,+,+,+,+	DBX1,HTATIP2,HTATIP2,HTATIP2,HTATIP2,HTATIP2	-200440,2705,2721,2763,3161,2877
chr10:102289691-102290274	chr10	+	102289871	102290263	True	NM_017902,NM_005004	chr10,chr10	+,-	HIF1AN,NDUFB8	5377,-235
chr7:102780998-102782074	chr7	+	102781116	102781902	True	NR_026660,NM_198990,NM_001122838,NM_031905	chr7,chr7,chr7,chr7	-,-,-,+	RPL19P12,NAPEPLD,NAPEPLD,ARMC10	998,7717,7717,-65839
chr6:135818763-135819036	chr6	+	135818809	135818973	True	NM_001134832,NM_001134830,NM_001134831,NM_017651,NR_026805	chr6,chr6,chr6,chr6,chr6	-,-,-,-,+	AHI1,AHI1,AHI1,AHI1,NCRNA00271	0,0,0,0,13
chr1:183160916-183161962	chr1	+	183161024	183161707	True	NM_018891,NM_170706,NM_005562	chr1,chr1,chr1	+,-,+	LAMC2,NMNAT2,LAMC2	-5912,112353,-5912
chr11:8986377-8986605	chr11	+	8986409	8986637	True	NM_182901,NM_020644	chr11,chr11	+,-	C11orf17,TMEM9B	-53658,-420
chr5:64777676-64778462	chr5	+	64777708	64778493	True	NM_015342,NM_197941	chr5,chr5	+,-	PPWD1,ADAMTS6	80637,-4
chr7:116501556-116502453	chr7	+	116501646	116502374	True	NR_002330,NM_006136	chr7,chr7	-,+	ST7OT1,CAPZA2	92064,188
chr2:27196582-27197861	chr2	+	27196774	27197890	True	NM_012326,NM_001134693	chr2,chr2	+,-	MAPRE3,OST4	-3300,96727
chr17:19771079-19771295	chr17	+	19771130	19771302	True	NM_000382,NM_014683,NM_152904,NM_001142610	chr17,chr17,chr17,chr17	+,-,+,-	ALDH3A2,ULK2,SPECC1,ULK2	-219117,1,219032,1
chr12:52826722-52828012	chr12	+	52826827	52827411	True	NM_004693,NM_002284	chr12,chr12	-,+	KRT75,KRT86	749,-131229
chr10:50508780-50510326	chr10	+	50508825	50510141	True	NM_001080520,NM_199459,NM_001135196	chr10,chr10,chr10	-,+,+	DRGX,C10orf71,C10orf71	89816,-1689,-1689
chr2:160659107-160660880	chr2	+	160659308	160660579	True	NM_001198764,NM_022826,NM_014880,NM_001198763	chr2,chr2,chr2,chr2	-,+,-,-	CD302,MARCH7,CD302,CD302	-4542,-90349,-4542,-4542
chr6:36369316-36370603	chr6	+	36369547	36370527	True	NM_016135,NM_173562	chr6,chr6	-,+	ETV7,KCTD20	-14080,40016
chr1:160042377-160043174	chr1	+	160042580	160043197	True	NM_002241,NM_004983	chr1,chr1	-,+	KCNJ10,KCNJ9	-2529,8162
chr8:145065800-145066131	chr8	+	145065896	145066176	True	NM_000837,NM_032789,NM_001009184	chr8,chr8,chr8	+,-,+	GRINA,PARP10,GRINA	-1721,-5261,-1721
chr11:77705886-77706102	chr11	+	77705931	77706041	True	NM_003251,NM_033547	chr11,chr11	+,-	THRSP,INTS4	68865,-214
chr7:19748696-19750448	chr7	+	19748792	19750475	True	NM_001002926,NM_002214,NR_036101	chr7,chr7,chr7	-,+,-	TWISTNB,ITGB8,MIR3146	-132,620249,-3733
chr5:176564280-176564930	chr5	+	176564360	176564790	True	NM_172349,NM_022455,NM_001199298	chr5,chr5,chr5	+,+,-	NSD1,NSD1,UIMC1	-4340,-3587,-130565
chr6:135271867-135272995	chr6	+	135271933	135273029	True	NM_170771,NM_022568,NM_001193480,NM_005375	chr6,chr6,chr6,chr6	-,-,-,+	ALDH8A1,ALDH8A1,ALDH8A1,MYB	-673,-673,-673,229423
chr6:101159528-101160792	chr6	+	101159625	101160552	True	NM_001166247,NM_006828	chr6,chr6	+,-	GRIK2,ASCC3	686308,168732
chr16:14788613-14788985	chr16	+	14788773	14788839	True	NM_003561,NM_016561	chr16,chr16	-,+	PLA2G10,BFAR	-247,-62156
chr16:14788613-14788985	chr16	+	14827891	14827957	False	NM_003561,NM_014287	chr16,chr16	-,+	PLA2G10,NOMO1	-39365,99685
chr7:150209988-150210559	chr7	+	150210175	150210480	True	NM_024711,NM_153236	chr7,chr7	-,+	GIMAP6,GIMAP7	119255,1464
chr7:150444326-150446024	chr7	+	150444594	150446052	True	NM_001162367,NM_001101311	chr7,chr7	+,-	LOC100128542,TMEM176B	771,51619
chr11:63704967-63705670	chr11	+	63705013	63705584	True	NM_024771,NM_173587	chr11,chr11	+,-	NAA40,RCOR2	857,-20697
chr12:93960557-93962282	chr12	+	93960782	93962193	True	NM_003877,NM_003348	chr12,chr12	+,-	SOCS2,UBE2N	1404,-124756
chr1:207643140-207643456	chr1	+	207643153	207643495	True	NR_029832,NM_001877	chr1,chr1	-,+	MIR29C,CR2	331843,-15559
chr8:74907015-74907468	chr8	+	74907265	74907475	True	NM_005648,NM_015364,NM_001195797	chr8,chr8,chr8	-,+,+	TCEB1,LY96,LY96	-22743,-3765,-3765
chr1:100231383-100232192	chr1	+	100231749	100232208	True	NR_037516,NM_001013660	chr1,chr1	+,-	MIR548AA1,FRRS1	-77194,-400
chr14:95048885-95049096	chr14	+	95048923	95049115	True	NM_173850,NM_000624	chr14,chr14	-,+	SERPINA12,SERPINA5	-64742,-1243
chr20:57091248-57091830	chr20	+	57091289	57091740	True	NM_153360,NR_034147	chr20,chr20	-,+	APCDD1L,LOC149773	-1340,-905
chr16:67561633-67562082	chr16	+	67561845	67562131	True	NM_001138,NM_001193524,NM_001193523,NM_001193522,NM_024519	chr16,chr16,chr16,chr16,chr16	-,+,+,+,+	AGRP,FAM65A,FAM65A,FAM65A,FAM65A	-44129,9233,1408,588,585
chrX:49682429-49682898	chrX	+	49682500	49682733	True	NM_001127898,NM_001127899,NR_026742	chrX,chrX,chrX	+,+,-	CLCN5,CLCN5,LOC158572	4491,4491,-38541
chr19:21931064-21931996	chr19	+	21931094	21932033	True	NR_024523,NM_173531	chr19,chr19	+,-	LOC641367,ZNF100	1513,18452
chr22:37092255-37093678	chr22	+	37092575	37093439	True	NM_006078,NM_000631	chr22,chr22	-,+	CACNG2,NCF4	5301,163590
chr5:118789037-118790407	chr5	+	118789037	118789968	True	NM_173666,NM_000414,NM_001199292,NM_001199291	chr5,chr5,chr5,chr5	-,+,+,+	DTWD2,HSD17B4,HSD17B4,HSD17B4	-464797,-950,-950,-886
chr20:20033096-20033313	chr20	+	20033123	20033361	True	NM_001167816,NM_015585,NM_016652	chr20,chr20,chr20	+,+,-	C20orf26,C20orf26,CRNKL1	3928,-16,3379
chr11:63434953-63436598	chr11	+	63435486	63436643	True	NM_006054,NM_015459	chr11,chr11	+,-	RTN3,ATL3	12278,2490
chr3:138064902-138066525	chr3	+	138065025	138066198	True	NM_012219,NM_001085049,NM_178130	chr3,chr3,chr3	+,+,-	MRAS,MRAS,TXNDC6	426,1309,-16297
chr14:96176163-96176560	chr14	+	96176164	96176487	True	NM_001098725,NM_004918,NM_021966	chr14,chr14,chr14	-,+,-	TCL1A,TCL1B,TCL1A	4096,-23461,4096
chr7:65447337-65447918	chr7	+	65447502	65447722	True	NM_000181,NM_000048	chr7,chr7	-,+	GUSB,ASL	-201,93053
chr3:28282924-28283182	chr3	+	28282929	28283183	True	NM_022461,NM_182523	chr3,chr3	-,+	AZI2,CMC1	107485,4
chr6:41011661-41012556	chr6	+	41011717	41012296	True	NM_001010873,NM_001159726,NM_173561,NM_006789	chr6,chr6,chr6,chr6	+,+,-,+	TSPO2,TSPO2,UNC5CL,APOBEC2	-1531,-1311,-4779,8643
chr9:14693456-14694172	chr9	+	14693736	14694188	True	NR_003920,NM_178566	chr9,chr9	+,-	LOC389705,ZDHHC21	299136,-256
chr5:177660735-177661391	chr5	+	177660882	177661436	True	NM_153373,NM_031266	chr5,chr5	-,+	AGXT2L2,HNRNPAB	-1079,-29432
chr12:131355331-131355723	chr12	+	131355449	131355741	True	NM_194356,NM_006325	chr12,chr12	-,+	STX2,RAN	-31638,875
chr4:40170722-40171958	chr4	+	40171108	40171966	True	NM_004310,NR_027277	chr4,chr4	+,-	RHOH,LOC344967	26560,-112289
chr2:242813274-242813884	chr2	+	242813312	242813584	True	NM_173821,NM_005018	chr2,chr2	+,-	C2orf85,PDCD1	-1477,-12254
chr14:23455776-23456696	chr14	+	23455891	23456671	True	NM_001099780,NM_198086,NM_032876	chr14,chr14,chr14	+,-,-	PSMB11,JUB,JUB	54704,-9459,-4043
chrX:154492495-154493162	chrX	+	154492666	154493152	True	NM_003372,NM_171998	chrX,chrX	+,-	VBP1,RAB39B	-48029,750
chr2:143946485-143947324	chr2	+	143946716	143947375	True	NM_018460,NM_024659	chr2,chr2	+,-	ARHGAP15,GTDC1	-59874,1047585
chr1:100624285-100625125	chr1	+	100624287	100625140	True	NM_144620,NM_019083	chr1,chr1	-,+	LRRC39,CCDC76	18685,-25639
chr1:100610907-100612152	chr1	+	100610914	100611983	True	NM_019083,NM_194292	chr1,chr1	+,-	CCDC76,SASS6	-12259,-12403
chr1:9598170-9598874	chr1	+	9598192	9598776	True	NR_027045,NM_032315	chr1,chr1	-,+	C1orf200,SLC25A33	115930,751
chr16:30078184-30078602	chr16	+	30078217	30078597	True	NM_002720,NM_004608,NM_184043,NM_184041,NM_001127617	chr16,chr16,chr16,chr16,chr16	+,-,+,+,+	PPP4C,TBX6,ALDOA,ALDOA,ALDOA	8786,24658,-2668,-1224,-2295
chr1:205091441-205091767	chr1	+	205091515	205091806	True	NM_001193273,NM_001193272,NM_005076,NM_005057	chr1,chr1,chr1,chr1	-,-,+,-	RBBP5,RBBP5,CNTN2,RBBP5	-365,-365,-79226,-365
chr1:211668922-211670004	chr1	+	211668927	211669675	True	NM_183059,NM_001164688,NR_026761	chr1,chr1,chr1	-,-,+	RD3,RD3,C1orf97	-2668,-2668,-112881
chr2:69969491-69969792	chr2	+	69969556	69969837	True	NM_001153,NM_014911	chr2,chr2	+,-	ANXA4,AAK1	-480,-98579
chr10:61664033-61665323	chr10	+	61664090	61665150	True	NM_005436,NM_001143774	chr10,chr10	-,+	CCDC6,PHYHIPL	1315,-726922
chrX:35816852-35817078	chrX	+	35816852	35816950	True	NM_001099921,NM_031442	chrX,chrX	+,-	MAGEB16,TMEM47	-444,-1141447
chr4:143766538-143766810	chr4	+	143766566	143766790	True	NM_001101669,NM_032557,NM_003866	chr4,chr4,chr4	-,+,-	INPP4B,USP38,INPP4B	864,339279,864
chr8:67695793-67696291	chr8	+	67696028	67696097	True	NR_002734,NM_013257,NM_170709	chr8,chr8,chr8	-,+,+	PTTG3P,SGK3,SGK3	-15788,-8663,-8663
chr17:66195770-66196060	chr17	+	66195774	66196070	True	NR_027283,NM_001174166	chr17,chr17	+,-	LOC440461,SLC16A6	-1024,91385
chr9:139982319-139983662	chr9	+	139982436	139983605	True	NM_016219,NR_027447	chr9,chr9	+,-	MAN1B1,LOC100289341	-1078,-1167
chr16:69984571-69984829	chr16	+	69984592	69984822	True	NM_001136214,NR_003610,NM_182619	chr16,chr16,chr16	+,-,+	CLEC18A,PDXDC2P,CLEC18A	-17,115079,-13
chr16:69984571-69984829	chr16	+	70207504	70207568	False	NR_033959,NM_173619	chr16,chr16	-,+	LOC729513,CLEC18C	52418,359
chr16:69984571-69984829	chr16	-	74455636	74455866	False	NM_001011880,NM_002811	chr16,chr16	-,+	CLEC18B,PSMD7	-268,-125014
chr8:57122428-57122813	chr8	+	57122428	57122697	True	NM_001011669,NM_002655,NM_001011667,NM_001011670,NM_001011671,NM_024300,NM_001114634,NM_001114635,NM_001011668	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	+,-,+,+,+,+,-,-,+	CHCHD7,PLAG1,CHCHD7,CHCHD7,CHCHD7,CHCHD7,PLAG1,PLAG1,CHCHD7	1617,1218,1617,1617,1617,1617,1218,1218,1617
chr20:9782743-9783755	chr20	+	9782814	9783694	True	NM_022096,NM_020341	chr20,chr20	+,-	ANKRD5,PAK7	232002,36054
chrX:119496037-119496257	chrX	+	119496052	119496214	True	NM_017938,NM_001142447,NM_012069	chrX,chrX,chrX	-,+,+	FAM70A,ATP1B4,ATP1B4	-50661,-163,-163
chr8:39571656-39573361	chr8	+	39572175	39573374	True	NM_001464,NM_014237	chr8,chr8	-,+	ADAM2,ADAM18	122455,-130150
chr7:75420229-75420435	chr7	+	75420266	75420326	True	NM_001040456,NM_006072	chr7,chr7	+,-	RHBDD2,CCL26	87990,-1202
chr12:117537358-117537728	chr12	+	117537385	117537609	True	NM_001168325,NM_153348,NM_017899,NR_031766	chr12,chr12,chr12,chr12	-,+,-,-	TESC,FBXW8,TESC,TESC	-134,-188675,-134,-134
chr3:32987908-32989142	chr3	+	32988546	32989134	True	NM_001039770,NM_005508	chr3,chr3	-,+	TMPPE,CCR4	149210,3931
chr6:158259135-158260988	chr6	+	158259447	158261006	True	NM_016224,NM_032861	chr6,chr6	+,-	SNX9,SERAC1	-15213,328359
chr5:138729272-138729680	chr5	+	138729281	138729719	True	NM_001033112,NM_016459,NM_001161546	chr5,chr5,chr5	+,-,-	PAIP2,MZB1,LOC389333	-51198,-3676,1216
chr9:112257648-112258644	chr9	+	112257739	112258688	True	NM_001145368,NM_002829,NM_001037293	chr9,chr9,chr9	-,-,+	PTPN3,PTPN3,PALM2	1960,1960,144379
chr15:69111588-69111788	chr15	+	69111645	69111821	True	NR_031680,NM_006305	chr15,chr15	+,-	MIR548H4,ANP32A	4481,1490
chr1:46904206-46905464	chr1	+	46904220	46905443	True	NM_001097611,NM_001441	chr1,chr1	-,+	KNCN,FAAH	111504,-44332
chr12:50301043-50301399	chr12	+	50301043	50301378	True	NM_000486,NM_012306,NR_026948	chr12,chr12,chr12	+,-,-	AQP2,FAIM2,LOC283332	43145,-3283,4319
chr12:67039373-67040326	chr12	+	67039611	67040369	True	NM_001178074,NM_033647	chr12,chr12	-,+	GRIP1,HELB	32606,-343314
chr16:56640965-56642095	chr16	+	56641194	56642112	True	NR_001447,NM_005953,NM_005950	chr16,chr16,chr16	+,+,-	MT1L,MT2A,MT1G	9260,365,59915
chr16:65156001-65156411	chr16	+	65156093	65156313	True	NM_001795,NM_001797	chr16,chr16	+,-	CDH5,CDH11	1244211,-174
chr14:50065243-50065470	chr14	+	50065278	50065516	True	NM_203467,NR_037792,NR_037793,NM_001030001,NM_152329	chr14,chr14,chr14,chr14,chr14	+,+,+,-,+	LRR1,LRR1,LRR1,RPS29,LRR1	12,12,12,-12184,12
chr15:85525101-85525318	chr15	+	85525101	85525367	True	NM_173454,NM_014300,NM_002605	chr15,chr15,chr15	+,-,+	PDE8A,SEC11A,PDE8A	49,-265427,49
chr6:36958683-36959282	chr6	+	36958704	36959026	True	NM_014341,NM_173558	chr6,chr6	-,+	MTCH1,FGD2	-4755,14396
chr6:43481293-43481901	chr6	+	43481399	43481629	True	NM_004875,NM_001012974,NM_203290,NM_015388	chr6,chr6,chr6,chr6	+,-,+,-	POLR1C,C6orf154,POLR1C,YIPF3	3161,-2975,3147,3149
chr3:127778606-127778992	chr3	+	127778605	127779005	True	NM_013336,NM_003707	chr3,chr3	+,-	SEC61A1,RUVBL1	-7451,63716
chr8:18036294-18036572	chr8	+	18036350	18036567	True	NM_004315,NM_001160179	chr8,chr8	-,+	ASAH1,NAT1	-93843,-8439
chr20:24451572-24451803	chr20	+	24451615	24451847	True	NM_024893,NM_178311	chr20,chr20	+,-	TMEM90B,GGTLC1	-1831,-482199
chr11:124542208-124542682	chr11	+	124542213	124542709	True	NM_170601,NM_017425,NM_001199922	chr11,chr11,chr11	-,+,-	SIAE,SPA17,SIAE	1118,1030,3540
chr2:27499622-27500221	chr2	+	27499624	27499868	True	NM_003459,NM_173650,NM_187841,NM_032546	chr2,chr2,chr2,chr2	-,+,+,+	SLC30A3,DNAJC5G,TRIM54,TRIM54	-13664,-1386,5428,5428
chr6:28550414-28551014	chr6	+	28550771	28550899	True	NM_052923,NM_003996	chr6,chr6	-,+	SCAND3,GPX5	4263,-57037
chr6:28550414-28551014	chr6_cox_hap2	+	72975	73103	False	NM_052923,NM_003996	chr6_cox_hap2,chr6_cox_hap2	-,+	SCAND3,GPX5	4263,-57037
chr16:56224531-56224826	chr16	+	56224652	56224834	True	NM_020988,NR_026889,NR_027078,NM_138736	chr16,chr16,chr16,chr16	+,-,-,+	GNAO1,DKFZP434H168,LOC283856,GNAO1	416,3653,222,416
chr7:56116230-56117953	chr7	+	56116230	56117975	True	NM_001762,NM_004577,NM_001009186	chr7,chr7,chr7	+,-,+	CCT6A,PSPH,CCT6A	1402,1350,1402
chr1:203470387-203470640	chr1	+	203470516	203470610	True	NM_002023,NM_014359	chr1,chr1	-,+	FMOD,OPTC	-150227,-7296
chr19:19434357-19434851	chr19	+	19434587	19434851	True	NM_172231,NM_015329	chr19,chr19	-,+	SUGP1,MAU2	-3280,-3008
chr8:53852563-53852901	chr8	+	53852583	53852887	True	NM_014781,NM_005285	chr8,chr8	-,+	RB1CC1,NPBWR1	-225557,-166
chr4:110707345-110708071	chr4	+	110707553	110708105	True	NM_018983,NM_000204	chr4,chr4	+,-	GAR1,CFI	28560,15281
chr10:95041861-95042434	chr10	+	95041864	95042222	True	NM_013451,NM_000783	chr10,chr10	-,+	MYOF,CYP26A1	199902,-208272
chr12:72362375-72362782	chr12	+	72362383	72362790	True	NM_173353,NR_024072	chr12,chr12	+,-	TPH2,MRS2P2	-29808,-117620
chr16:28724173-28725253	chr16	+	28724523	28725295	True	NM_003752,NM_001099661,NM_001037808,NM_177536	chr16,chr16,chr16,chr16	+,+,+,-	EIF3C,EIF3CL,EIF3C,SULT1A1	-1799,-1796,-1799,-89657
chr16:28724173-28725253	chr16	-	28412651	28413423	False	NM_003752,NM_018690,NM_001099661,NM_001037808	chr16,chr16,chr16,chr16	-,+,-,-	EIF3C,APOBR,EIF3CL,EIF3C	1799,92569,1796,1799
chr1:156785680-156785907	chr1	+	156785684	156785864	True	NM_003975,NM_001007792,NM_001161441,NM_001161443,NM_001161442,NM_001161444	chr1,chr1,chr1,chr1,chr1,chr1	-,+,-,-,-,-	SH2D2A,NTRK1,SH2D2A,SH2D2A,SH2D2A,SH2D2A	826,-193,826,125,826,826
chr22:36901932-36902145	chr22	+	36901937	36902057	True	NM_001102371,NM_024955,NM_145343	chr22,chr22,chr22	-,-,+	FOXRED2,FOXRED2,APOL1	1141,1083,-252871
chr15:69591603-69591901	chr15	+	69591676	69591843	True	NM_017705,NM_006305	chr15,chr15	+,-	PAQR5,ANP32A	-433,-478415
chr12:110269514-110270001	chr12	+	110269548	110269970	True	NM_021625,NM_001143852	chr12,chr12	-,+	TRPV4,TCHP	1292,68108
chr20:34286458-34286846	chr20	+	34286471	34286785	True	NM_080748,NM_001198989,NM_021100,NR_037570	chr20,chr20,chr20,chr20	+,-,-,-	ROMO1,NFS1,NFS1,NFS1	446,552,552,552
chr18:56935972-56936201	chr18	+	56935995	56936141	True	NM_013435,NM_002091	chr18,chr18	-,+	RAX,GRP	4534,-48646
chr3:48721568-48722076	chr3	+	48721646	48722042	True	NM_016453,NM_033629,NM_184231	chr3,chr3,chr3	-,+,-	NCKIPSD,TREX1,NCKIPSD	1342,-214468,1342
chr15:83680169-83680376	chr15	+	83680223	83680359	True	NR_027649,NM_031452,NR_027650,NM_001160114,NM_001160115,NM_001160116,NM_001160113,NM_144597	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,+,-,-,-,-,-,-	C15orf40,FAM103A1,C15orf40,C15orf40,C15orf40,C15orf40,C15orf40,C15orf40	84,-25279,84,84,84,84,84,84
chr9:117916542-117917418	chr9	+	117916588	117917398	True	NM_017418,NM_002160	chr9,chr9	+,-	DEC1,TNC	-12551,-36102
chr12:57939778-57940562	chr12	+	57939812	57940598	True	NM_004984,NM_006400	chr12,chr12	+,-	KIF5A,DCTN2	3248,430
chr1:31422127-31422373	chr1	+	31422142	31422374	True	NR_033295,NR_004054,NR_002762	chr1,chr1,chr1	-,-,+	SNORD103B,SNORD103A,PRO0611	-90,-90,38537
chr1:31422127-31422373	chr1	+	31408713	31408945	False	NR_033295,NR_004054,NR_002762	chr1,chr1,chr1	-,-,+	SNORD103B,SNORD103A,PRO0611	-90,-90,51966
chr15:79235137-79235865	chr15	+	79235189	79235590	True	NM_004390,NM_206839	chr15,chr15	-,+	CTSH,MORF4L1	1887,-70068
chr20:34289530-34290605	chr20	+	34289803	34290429	True	NR_037570,NM_001198989,NM_021100,NM_080748	chr20,chr20,chr20,chr20	-,-,-,+	NFS1,NFS1,NFS1,ROMO1	-2516,-2516,-2516,-2622
chr8:144697223-144697520	chr8	+	144697463	144697531	True	NM_003313,NM_032862,NM_023078	chr8,chr8,chr8	-,+,-	TSTA3,TIGD5,PYCRL	2251,-17440,-5679
chr19:4400637-4401004	chr19	+	4400742	4400896	True	NM_001199943,NM_003025,NM_005483,NM_001199944	chr19,chr19,chr19,chr19	-,-,+,-	SH3GL1,SH3GL1,CHAF1A,SH3GL1	-177,-177,1763,-327
chr6:46637474-46638760	chr6	+	46637644	46638330	True	NM_016593,NM_001010870,NM_004277	chr6,chr6,chr6	-,+,+	CYP39A1,TDRD6,SLC25A27	-17121,17281,-17043
chr3:111762958-111763958	chr3	+	111763142	111763852	True	NM_001042575,NR_026734,NM_001190259	chr3,chr3,chr3	+,+,-	TMPRSS7,TMPRSS7,GCET2	-4728,-4728,88350
chr19:34975123-34975527	chr19	+	34975256	34975364	True	NR_027620,NM_001080436	chr19,chr19	-,+	LOC643719,WTIP	93282,-2427
chr1:6087353-6088483	chr1	+	6087644	6088462	True	NM_001199860,NM_172130,NM_015102,NM_003636	chr1,chr1,chr1,chr1	+,+,-,+	KCNAB2,KCNAB2,NPHP4,KCNAB2	5885,-1625,-35111,-1625
chr9:125511841-125512267	chr9	+	125512003	125512249	True	NM_005388,NM_001004453	chr9,chr9	-,+	PDCL,OR1L6	78736,-19
chr9:139439342-139439577	chr9	+	139439394	139439576	True	NM_017617,NM_152571	chr9,chr9	-,+	NOTCH1,C9orf163	712,-61499
chr9:10582270-10583542	chr9	+	10582318	10583408	True	NM_000550,NM_002839	chr9,chr9	+,-	TYRP1,PTPRD	2109977,29373
chr16:30712058-30713365	chr16	+	30712073	30712900	True	NR_002966,NM_001014979,NM_006662	chr16,chr16,chr16	+,-,+	SNORA30,C16orf93,SRCAP	8957,60715,-1662
chr19:20279385-20279739	chr19	+	20279477	20279645	True	NM_033196,NM_052852	chr19,chr19	-,+	ZNF682,ZNF486	-129200,-1448
chr12:52008472-52010318	chr12	+	52008512	52009907	True	NM_014191,NM_001013690	chr12,chr12	+,-	SCN8A,FIGNL2	-23550,215848
chr4:175847449-175847682	chr4	+	175847449	175847687	True	NM_001130704,NM_001130705,NM_014269,NM_006529,NM_001130703	chr4,chr4,chr4,chr4,chr4	+,+,+,-,+	ADAM29,ADAM29,ADAM29,GLRA3,ADAM29	-7996,-7996,-7996,-96984,-7996
chr20:22384095-22384608	chr20	+	22384192	22384469	True	NR_027090,NM_001052	chr20,chr20	-,+	LOC284788,SSTR4	16863,631587
chr1:27479301-27479849	chr1	+	27479325	27479865	True	NM_015023,NM_003047	chr1,chr1	+,-	WDTC1,SLC9A1	81141,1636
chr3:16210057-16211728	chr3	+	16210093	16211733	True	NM_001047434,NM_054110	chr3,chr3	-,+	DPH3,GALNTL2	94813,4450
chr22:51043856-51044138	chr22	+	51043907	51044161	True	NM_016431,NM_012324,NM_005198,NM_000487	chr22,chr22,chr22,chr22	+,+,-,-	MAPK8IP2,MAPK8IP2,CHKB,ARSA	-2396,-4827,-22479,22490
chr1:205603328-205603625	chr1	+	205603458	205603521	True	NM_021795,NM_001973,NM_181644	chr1,chr1,chr1	-,-,+	ELK4,ELK4,MFSD4	-1458,-1458,-65404
chr6:21664730-21664937	chr6	+	21664757	21664969	True	NR_034143,NR_015410	chr6,chr6	-,+	LOC729177,FLJ22536	482503,1705
chr3:4534104-4534346	chr3	+	4534180	4534386	True	NM_001099952,NM_001168272,NM_002222,NM_182760	chr3,chr3,chr3,chr3	+,+,+,-	ITPR1,ITPR1,ITPR1,SUMF1	645,645,645,-25214
chr20:31351384-31352448	chr20	+	31351436	31352414	True	NM_006892,NM_175848,NM_175849,NM_053041	chr20,chr20,chr20,chr20	+,+,+,-	DNMT3B,DNMT3B,DNMT3B,COMMD7	-1296,-1296,-1296,-19622
chr15:72421862-72423197	chr15	+	72422201	72423250	True	NM_006901,NM_145204	chr15,chr15	-,+	MYO9A,SENP8	-11779,-11622
chr17:41019654-41019900	chr17	+	41019799	41019859	True	NR_002773,NR_027254	chr17,chr17	+,-	AOC4,LOC388387	-688,30942
chr19:58978782-58979768	chr19	+	58978916	58979694	True	NM_017908,NM_003433,NM_014347	chr19,chr19,chr19	+,-,+	ZNF446,ZNF132,ZNF324	8100,-27327,-555
chr19:58978782-58979768	chr19	+	58963680	58963916	False	NM_207395,NM_003433	chr19,chr19	+,-	ZNF324B,ZNF132	-760,-12091
chr9:35162372-35162790	chr9	+	35162482	35162822	True	NM_006377,NM_025182	chr9,chr9	+,-	UNC13B,KIAA1539	-544,-46589
chr7:26581272-26581927	chr7	+	26581291	26581945	True	NR_022006,NM_001145531	chr7,chr7	-,+	KIAA0087,C7orf71	-2847,95544
chrX:21958251-21958570	chrX	+	21958252	21958522	True	NM_004595,NM_014332	chrX,chrX	+,-	SMS,SMPX	192,-182022
chr20:33999926-34000164	chr20	+	34000091	34000175	True	NM_018244,NM_199487,NM_007186,NM_001184977	chr20,chr20,chr20,chr20	-,-,+,-	UQCC,UQCC,CEP250,UQCC	-146,-146,43047,-146
chr4:155410650-155410923	chr4	+	155410654	155410952	True	NM_001142552,NM_001142553,NM_001184741	chr4,chr4,chr4	-,-,+	DCHS2,DCHS2,FGB	1975,2028,73179
chr6:170629342-170629642	chr6	+	170629463	170629677	True	NM_032448,NM_005618	chr6,chr6	+,-	FAM120B,DLL1	-13678,-29766
chr6:168476780-168477134	chr6	+	168476824	168477150	True	NM_030615,NM_001122841,NM_024919	chr6,chr6,chr6	+,-,-	KIF25,FRMD1,FRMD1	-58322,-292,2739
chr10:79688376-79689091	chr10	+	79688380	79689128	True	NR_024585,NM_004747	chr10,chr10	+,-	LOC100128292,DLG5	-1861,-2032
chr10:16561696-16562016	chr10	+	16561740	16561932	True	NM_001010908,NM_030664	chr10,chr10	-,+	C1QL3,PTER	2122,-82824
chr18:32558697-32560200	chr18	+	32558696	32559822	True	NM_001143827,NM_001143826,NM_001112734	chr18,chr18,chr18	+,+,-	MAPRE2,MAPRE2,ZSCAN30	-539,-1855,310425
chr7:21580968-21581442	chr7	+	21581011	21581485	True	NM_003777,NM_001127370	chr7,chr7	+,-	DNAH11,CDCA7L	1347,404108
chr19:35424279-35425853	chr19	+	35424398	35425653	True	NM_001099438,NM_175872,NR_024018,NM_194325,NM_001099437	chr19,chr19,chr19,chr19,chr19	+,-,+,+,+	ZNF30,ZNF792,ZNF30,ZNF30,ZNF30	-6650,29363,-6650,-6650,-6650
chr1:42845187-42845998	chr1	+	42845320	42845967	True	NM_001198850,NM_173642	chr1,chr1	-,+	FOXJ3,RIMKLA	-43772,500
chr19:18394155-18394697	chr19	+	18394247	18394427	True	NM_001145304,NM_005354,NR_036155,NM_001145305,NM_025249	chr19,chr19,chr19,chr19,chr19	-,-,+,-,-	KIAA1683,JUND,MIR3188,KIAA1683,KIAA1683	-8928,-1815,-1411,-8928,-8928
chr12:53614211-53614816	chr12	+	53614287	53614477	True	NM_001170790,NM_001042728	chr12,chr12	+,-	MFSD5,RARG	30892,-137
chr13:33159552-33159819	chr13	+	33159553	33159797	True	NM_033111,NM_015032	chr13,chr13	-,+	N4BP2L2,PDS5B	-46617,766
chr16:2038680-2039023	chr16	+	2038708	2039064	True	NM_144603,NM_172168,NM_004209,NM_172167,NM_005262	chr16,chr16,chr16,chr16,chr16	-,-,+,-,+	NOXO1,NOXO1,SYNGR3,NOXO1,GFER	-7268,-7524,881,-7524,-4609
chr8:10383069-10383648	chr8	+	10383120	10383646	True	NM_001197020,NM_178857,NM_198464	chr8,chr8,chr8	+,-,+	PRSS55,RP1L1,PRSS55	-115,129021,-115
chr14:94760694-94761499	chr14	+	94760705	94761453	True	NM_001100607,NM_058237,NM_016186	chr14,chr14,chr14	-,+,-	SERPINA10,PPP4R4,SERPINA10	-1109,-120107,-1344
chr2:96812241-96812459	chr2	+	96812272	96812468	True	NM_004418,NM_001037228,NM_001002036	chr2,chr2,chr2	-,+,-	DUSP2,LOC285033,ASTL	-1093,93508,-8097
chr7:66322185-66324009	chr7	+	66322207	66324059	True	NR_003934,NM_017994	chr7,chr7	-,+	LOC729156,C7orf42	-12394,62143
chr14:95941378-95942233	chr14	+	95941519	95941949	True	NM_016417,NM_152592	chr14,chr14	+,-	GLRX5,C14orf49	59373,274
chr3:137727622-137728742	chr3	+	137727858	137728650	True	NM_016369,NM_001170538	chr3,chr3	+,-	CLDN18,DZIP1L	355,103722
chr5:121484718-121486641	chr5	+	121485121	121486638	True	NM_002317,NM_001195535	chr5,chr5	-,+	LOX,LOC728460	-71066,9232
chrX:71935516-71936136	chrX	+	71935580	71935969	True	NM_002637,NM_001122670,NM_001080851,NM_001172436	chrX,chrX,chrX,chrX	-,-,+,-	PHKA1,PHKA1,DMRTC1B,PHKA1	-1551,-1551,128906,-1551
chr22:37257500-37258506	chr22	+	37257555	37258543	True	NM_013416,NM_000631,NM_002854	chr22,chr22,chr22	+,+,-	NCF4,NCF4,PVALB	-577,-577,-42038
chr21:46347383-46347845	chr21	+	46347538	46347814	True	NM_058190,NM_000211,NM_001127491	chr21,chr21,chr21	+,-,-	C21orf70,ITGB2,ITGB2	12140,-6573,989
chr5:1202756-1203550	chr5	+	1202874	1203380	True	NM_001003841,NM_006598	chr5,chr5	+,-	SLC6A19,SLC12A7	-1215,-90702
chrX:63263432-63263903	chrX	+	63263530	63263948	True	NM_152424,NM_001010888	chrX,chrX	-,+	FAM123B,ZC3H12B	161726,1444666
chr15:21004584-21004799	chr15	+	21004628	21004784	True	NR_027992,NR_027411	chr15,chr15	-,+	BCL8,GOLGA8C	-43148,-237005
chr15:21004584-21004799	chr15	+	22011417	22011467	False	NR_015416,NR_024387	chr15,chr15	+,-	LOC727924,CXADRP2	266564,5461
chr2:179071432-179072726	chr2	+	179071793	179072708	True	NM_032523,NM_001077197	chr2,chr2	+,-	OSBPL6,PDE11A	-12636,-98727
chr2:44588568-44588993	chr2	+	44588610	44588851	True	NM_024766,NM_001171617,NM_006036,NM_001042386,NM_001171603,NM_001042385,NM_001171606,NM_001171613	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-,-,-	CAMKMT,PREPL,PREPL,PREPL,PREPL,PREPL,PREPL,PREPL	191,201,-797,-1722,201,-1722,4,4
chr8:144295657-144296178	chr8	+	144295721	144296089	True	NM_178172,NM_001130478	chr8,chr8	+,-	GPIHBP1,LY6H	-704,-53668
chr10:90994828-90995341	chr10	+	90994853	90995321	True	NM_001127605,NM_001547	chr10,chr10	-,+	LIPA,IFIT2	16389,66384
chr1:35661265-35662429	chr1	+	35661425	35662481	True	NM_005066,NM_005095	chr1,chr1	-,+	SFPQ,ZMYM4	-2682,72086
chr4:46994984-46995295	chr4	+	46994989	46995283	True	NM_000809,NM_000812,NM_001204267,NM_001204266	chr4,chr4,chr4,chr4	-,+,-,-	GABRA4,GABRB1,GABRA4,GABRA4	1191,38011,289,289
chr12:54777534-54778334	chr12	+	54777725	54778243	True	NM_015481,NM_001130968,NR_029894,NM_001130967	chr12,chr12,chr12,chr12	-,-,+,-	ZNF385A,ZNF385A,MIR148B,ZNF385A	288,6890,-46776,6890
chr16:2199248-2199594	chr16	+	2199252	2199538	True	NR_002736,NM_014353,NM_032271	chr16,chr16,chr16	-,+,+	SNORD60,RAB26,TRAF7	5618,-652,6260
chr10:14816531-14816945	chr10	+	14816535	14816925	True	NM_031453,NM_016299	chr10,chr10	-,+	FAM107B,HSPA14	21,63335
chr12:66586946-66588327	chr12	+	66587156	66588228	True	NM_016056,NM_007199,NM_001142523	chr12,chr12,chr12	-,+,+	TMBIM4,IRAK3,IRAK3	-23349,-4229,-4229
chr1:225841781-225842042	chr1	+	225841822	225842092	True	NM_001130440,NM_018212,NM_001008493	chr1,chr1,chr1	+,-,-	SRP9,ENAH,ENAH	123422,-977,-977
chr2:676221-676454	chr2	+	676246	676494	True	NM_018968,NM_152834	chr2,chr2	+,-	SNTG2,TMEM18	270059,995
chr14:23937380-23938387	chr14	+	23937638	23938399	True	NM_000257,NM_001042635,NM_015514	chr14,chr14,chr14	-,+,+	MYH7,NGDN,NGDN	-32768,498,498
chr5:1632378-1632928	chr5	+	1632627	1632927	True	NR_003713,NM_004553	chr5,chr5	-,+	LOC728613,NDUFS6	1243,168568
chr5:1632378-1632928	chr5	-	273159	273219	False	NM_145265,NM_013232	chr5,chr5	-,+	CCDC127,PDCD6	-54862,-1474
chr16:2061249-2061871	chr16	+	2061634	2061694	True	NM_178167,NM_001099456	chr16,chr16	-,+	ZNF598,NPW	-1871,7826
chrX:54815679-54816019	chrX	+	54815686	54816052	True	NM_177433,NM_198510	chrX,chrX	+,-	MAGED2,ITIH5L	18118,8671
chrX:54815679-54816019	chrX	-	54850460	54850510	False	NR_002953,NM_198510	chrX,chrX	+,-	SNORA11,ITIH5L	-9708,-25787
chr7:100063837-100064285	chr7	+	100064001	100064229	True	NM_001004323,NM_173564	chr7,chr7	-,+	C7orf61,C7orf51	-2107,17320
chr20:55967960-55969360	chr20	+	55968298	55969266	True	NM_183425,NM_001190472,NM_017495	chr20,chr20,chr20	+,-,+	RBM38,MTRNR2L3,RBM38	-1886,-33420,-1886
chr20:33759938-33760942	chr20	+	33759943	33760861	True	NM_006404,NR_026728	chr20,chr20	+,-	PROCR,EDEM2	-220,-24782
chr21:30565407-30566149	chr21	+	30565548	30566028	True	NM_006585,NR_027072	chr21,chr21	-,+	CCT8,NCRNA00189	-119538,12
chr12:111359445-111361407	chr12	+	111359660	111361342	True	NM_000432,NR_036513	chr12,chr12	-,+	MYL2,LOC100131138	-1256,13063
chr12:113495732-113496065	chr12	+	113495737	113496079	True	NM_004416,NM_001193521	chr12,chr12	+,-	DTX1,RASAL1	-126,77530
chr1:48378407-48378625	chr1	+	48378417	48378603	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	84009,309753
chr6:169653174-169653417	chr6	+	169653173	169653468	True	NM_001029863,NM_003247	chr6,chr6	+,-	C6orf120,THBS2	448788,728
chr5:54467698-54468830	chr5	+	54467768	54468687	True	NR_031572,NR_030387,NR_029960,NM_001170402,NM_152623,NM_001145734,NM_001008397	chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,-,-,+	MIR449C,MIR449B,MIR449A,CDC20B,CDC20B,CDC20B,GPX8	-19,-1198,-1318,368,368,368,-11835
chr1:77646980-77648672	chr1	+	77647206	77648558	True	NM_174858,NM_005482	chr1,chr1	+,-	AK5,PIGK	99103,36635
chr17:47212913-47213146	chr17	+	47212912	47213000	True	NM_001159388,NM_031498,NM_001159387,NM_153446	chr17,chr17,chr17,chr17	+,-,+,+	B4GALNT2,GNGT2,B4GALNT2,B4GALNT2	-3145,73799,-2836,-2638
chr9:85672481-85673060	chr9	+	85672518	85672928	True	NM_152573,NM_001001551	chr9,chr9	-,+	RASEF,C9orf103	5165,565104
chr10:118506970-118508947	chr10	+	118507062	118508990	True	NM_025015,NM_005396	chr10,chr10	-,+	HSPA12A,PNLIPRP2	-4977,-126648
chr3:186288750-186289979	chr3	+	186288986	186289984	True	NM_016306,NM_001134415,NM_018138	chr3,chr3,chr3	+,-,-	DNAJB11,TBCCD1,TBCCD1	-570,-654,-3845
chr17:40952004-40952924	chr17	+	40952167	40952897	True	NM_173478,NM_001040431	chr17,chr17	+,-	CNTD1,CCDC56	-1377,-1463
chrX:15693473-15693704	chrX	+	15693483	15693675	True	NM_020665,NR_026551	chrX,chrX	-,+	TMEM27,CA5BP1	-10329,-495
chr1:220958639-220959557	chr1	+	220958737	220959459	True	NM_022746,NM_012414	chr1,chr1	+,-	MOSC1,RAB3GAP2	579,-512894
chr19:4724141-4724623	chr19	+	4724141	4724656	True	NR_027148,NM_139159	chr19,chr19	+,-	C19orf30,DPP9	44460,-286
chr11:61448555-61448965	chr11	+	61448710	61449008	True	NR_026882,NM_006133	chr11,chr11	-,+	DKFZP434K028,DAGLA	76178,-856
chr2:128406350-128406829	chr2	+	128406774	128406878	True	NM_005291,NM_001161416,NR_027823,NM_001161417,NM_001161415	chr2,chr2,chr2,chr2,chr2	+,+,-,+,+	GPR17,GPR17,LIMS2,GPR17,GPR17	-3386,-3386,-1021,-3386,-3386
chrX:66765502-66765994	chrX	+	66765529	66765971	True	NM_000044,NM_002547	chrX,chrX	+,-	AR,OPHN1	-1706,887378
chr10:131936293-131937412	chr10	+	131936609	131937025	True	NM_006541,NM_001199868,NR_034125	chr10,chr10,chr10	+,+,-	GLRX3,GLRX3,LOC387723	-2021,-2021,-27528
chr22:45063514-45064056	chr22	+	45063662	45064026	True	NM_032287,NM_001198721,NM_001017528,NM_001017529,NM_001017530,NM_015366	chr22,chr22,chr22,chr22,chr22,chr22	-,+,+,+,+,+	LDOC1L,PRR5,PRR5,PRR5,PRR5,PRR5	-169657,8661,400,400,8661,8661
chr22:25202487-25203831	chr22	+	25202711	25203625	True	NM_001098498,NM_001008496,NM_001098497,NM_001039948,NM_133454	chr22,chr22,chr22,chr22,chr22	+,-,+,+,+	SGSM1,PIWIL3,SGSM1,SGSM1,SGSM1	-626,-32028,-626,-626,-626
chr14:74893071-74894993	chr14	+	74893538	74895030	True	NM_001105579,NM_194279	chr14,chr14	-,+	TMEM90A,ISCA2	-733,65419
chr6:41010373-41011661	chr6	+	41010395	41011557	True	NM_001010873,NM_001159726,NM_173561,NM_006789	chr6,chr6,chr6,chr6	+,+,-,+	TSPO2,TSPO2,UNC5CL,APOBEC2	-209,11,-3457,9382
chr19:2166675-2167588	chr19	+	2166734	2167482	True	NM_003938,NM_032482	chr19,chr19	-,+	AP3D1,DOT1L	-15178,-2637
chr21:44870753-44871371	chr21	+	44870788	44871300	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	-935,-23786
chr22:50248905-50250013	chr22	+	50248941	50249792	True	NM_014838,NM_014577	chr22,chr22	+,-	ZBED4,BRD1	-1495,-30489
chr1:210122840-210124774	chr1	+	210123080	210124591	True	NR_027459,NM_006147	chr1,chr1	+,-	SYT14,IRF6	-11602,-143601
chr20:42353985-42355654	chr20	+	42354109	42355651	True	NM_001008901,NM_176791,NM_002466	chr20,chr20,chr20	-,-,+	GTSF1L,GTSF1L,MYBL2	41,41,-58451
chr2:128405842-128406350	chr2	+	128405865	128406193	True	NM_005291,NM_001161416,NR_027823,NM_001161417,NM_001161415	chr2,chr2,chr2,chr2,chr2	+,+,-,+,+	GPR17,GPR17,LIMS2,GPR17,GPR17	-2481,-2481,-112,-2481,-2481
chr10:102755034-102755877	chr10	+	102755154	102755793	True	NM_001163812,NM_001163813,NM_001163814,NM_032112,NM_021830,NM_176794,NM_176793,NM_176792,NM_032429	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,-,+,-,-,-,+	C10orf2,C10orf2,C10orf2,MRPL43,C10orf2,MRPL43,MRPL43,MRPL43,LZTS2	-7912,-7912,-7912,-7882,-7912,-7882,-7882,-7882,1070
chr19:36979144-36979443	chr19	+	36979310	36979483	True	NM_001145344,NM_001145345,NM_001145343,NR_036504,NM_032838	chr19,chr19,chr19,chr19,chr19	-,-,-,+,-	ZNF566,ZNF566,ZNF566,LOC728752,ZNF566	1037,1037,1037,1045,911
chr1:202187579-202187873	chr1	+	202187644	202187832	True	NM_001017404,NR_037664	chr1,chr1	+,-	LGR6,PTPN7	-4416,-56928
chr11:65220671-65221182	chr11	+	65220729	65221012	True	NR_030343,NM_182556	chr11,chr11	+,-	MIR612,SLC25A45	-8860,-70587
chrX:111914474-111914932	chrX	+	111914516	111914978	True	NM_001004308,NM_178175	chrX,chrX	+,-	ZCCHC16,LHFPL1	-588314,8455
chr9:34973116-34973742	chr9	+	34973222	34973708	True	NM_007126,NM_015297	chr9,chr9	-,+	VCP,KIAA1045	99081,-15082
chr6:166399936-166400405	chr6	+	166399935	166400351	True	NR_026860,NR_026861,NR_027284	chr6,chr6,chr6	-,-,+	C6orf176,C6orf176,LOC441177	1226,1226,687
chrX:13364800-13365693	chrX	+	13364883	13365513	True	NM_001167890,NM_001135995	chrX,chrX	+,-	EGFL6,ATXN3L	222180,-26365
chr4:117520443-117520708	chr4	+	117520525	117520701	True	NM_152402,NR_031737	chr4,chr4	-,+	TRAM1L1,MIR1973	486085,-299695
chr1:149906929-149908097	chr1	+	149907193	149908059	True	NM_181873,NM_005850,NM_016074,NM_001145862	chr1,chr1,chr1,chr1	-,-,+,-	MTMR11,SF3B4,BOLA1,MTMR11	257,-7049,-36089,782
chr5:150539562-150541286	chr5	+	150540537	150541190	True	NM_000405,NM_001155	chr5,chr5	+,-	GM2A,ANXA6	91422,-3094
chr3:193319036-193320146	chr3	+	193319036	193320132	True	NM_032279,NM_015560,NM_130832,NM_130833,NM_130831,NM_130836,NM_130837,NM_130834,NM_130835	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,+,+,+,+,+,+,+	ATP13A4,OPA1,OPA1,OPA1,OPA1,OPA1,OPA1,OPA1,OPA1	-46340,-8160,-8160,-8160,-8160,-8160,-8160,-8160,-8160
chr7:134577963-134578265	chr7	+	134578061	134578294	True	NM_033139,NM_033140,NM_024033	chr7,chr7,chr7	+,+,-	CALD1,CALD1,C7orf49	-1969,-1969,277289
chr12:49740921-49741173	chr12	+	49740923	49741197	True	NM_001008223,NM_024902	chr12,chr12	-,+	C1QL4,DNAJC22	-9952,57
chr1:179921941-179922475	chr1	+	179921973	179922359	True	NM_014810,NM_022347	chr1,chr1	+,-	CEP350,TOR1AIP2	1548,-75032
chr4:78742210-78744114	chr4	+	78742276	78744095	True	NM_020236,NM_144571	chr4,chr4	+,-	MRPL1,CNOT6L	39709,-1732
chr12:48289688-48290488	chr12	+	48289813	48290517	True	NM_001143841,NM_000376,NM_001017536,NM_001017535	chr12,chr12,chr12,chr12	+,-,-,-	TMEM106C,VDR,VDR,VDR	66812,8347,8347,8347
chr5:140474381-140474621	chr5	+	140474389	140474527	True	NM_018936,NM_018937,NM_031947	chr5,chr5,chr5	+,+,-	PCDHB2,PCDHB3,SLC25A2	-203,5706,209135
chrX:153189780-153190239	chrX	+	153189787	153190215	True	NM_001164741,NM_001146151,NM_001666	chrX,chrX,chrX	-,+,-	ARHGAP4,AVPR2,ARHGAP4	1549,-19309,1549
chr5:54456814-54457943	chr5	+	54456823	54457848	True	NR_029960,NM_001008397,NR_030387	chr5,chr5,chr5	-,+,-	MIR449A,GPX8,MIR449B	8657,-891,8777
chr2:161035298-161036196	chr2	+	161035523	161036243	True	NM_000888,NM_022826	chr2,chr2	-,+	ITGB6,MARCH7	20397,-466567
chr7:130128880-130130153	chr7	+	130128886	130129618	True	NR_029899,NR_004382,NM_177525,NM_177524,NM_002402	chr7,chr7,chr7,chr7,chr7	+,-,+,+,+	MIR335,MESTIT1,MEST,MEST,MEST	6333,1445,1554,-2898,2319
chr15:37182343-37183826	chr15	+	37182458	37183843	True	NR_024264,NM_032499	chr15,chr15	-,+	LOC145845,C15orf41	-3724,-249710
chr20:43544754-43545419	chr20	+	43544800	43545371	True	NM_006809,NM_001124756	chr20,chr20	-,+	TOMM34,PABPC1L	43793,-6151
chr14:91589307-91590362	chr14	+	91589464	91589926	True	NM_001102369,NM_001102368,NM_001102367,NM_024952,NM_001102366,NR_003709,NM_182398	chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,+,+,+,-	C14orf159,C14orf159,C14orf159,C14orf159,C14orf159,SNORA11B,RPS6KA5	-9158,-9158,-8536,-9158,-9158,2843,-62471
chr15:54317034-54318484	chr15	+	54317274	54318533	True	NM_182758,NM_001080534	chr15,chr15	-,+	WDR72,UNC13C	-265415,-12236
chr12:53042772-53044534	chr12	+	53042850	53044563	True	NM_199187,NM_000423	chr12,chr12	+,-	KRT18,KRT2	298091,1446
chr14:103782550-103783486	chr14	+	103783047	103783263	True	NR_033938,NM_001969	chr14,chr14	-,+	LOC100131366,EIF5	-127682,17229
chr3:58567467-58568324	chr3	+	58567466	58568305	True	NM_001076778,NM_007177,NM_153331	chr3,chr3,chr3	-,-,+	FAM107A,FAM107A,KCTD6	-3975,-3975,-83425
chr2:24298925-24299143	chr2	+	24298925	24299161	True	NM_147184,NM_054033,NM_004881,NM_016047	chr2,chr2,chr2,chr2	-,+,-,-	TP53I3,FKBP1B,TP53I3,SF3B14	8544,-26392,8617,203
chr8:39808390-39808631	chr8	+	39808393	39808672	True	NM_194294,NM_001464	chr8,chr8	+,-	IDO2,ADAM2	-15970,-112614
chr2:24305523-24305885	chr2	+	24305525	24305737	True	NM_147184,NM_054033,NM_004881,NM_016047	chr2,chr2,chr2,chr2	-,+,-,-	TP53I3,FKBP1B,TP53I3,SF3B14	1968,-32993,2041,-6211
chr16:88222469-88222960	chr16	+	88222501	88222809	True	NM_001173543,NM_001739	chr16,chr16	+,-	BANP,CA5A	-218928,-252389
chr16:88222469-88222960	chr16	+	29234291	29234341	False	NR_002939,NM_001031827	chr16,chr16	+,-	RUNDC2C,BOLA2	68199,231994
chr16:68271721-68271971	chr16	+	68271746	68272016	True	NM_024939,NM_012320	chr16,chr16	-,+	ESRP2,PLA2G15	-1610,7230
chr1:25923296-25925008	chr1	+	25923384	25924944	True	NM_020379,NM_138618	chr1,chr1	+,-	MAN1C1,RHCE	19014,-176021
chr1:47781188-47781693	chr1	+	47781369	47781533	True	NM_001136140,NM_001048166,NM_003035	chr1,chr1,chr1	+,-,-	CMPK1,STIL,STIL	17935,-1550,-1550
chr19:15722624-15723355	chr19	+	15722988	15723356	True	NM_007253,NM_052890	chr19,chr19	+,-	CYP4F8,PGLYRP2	2672,-132673
chr19:38143391-38143940	chr19	+	38143492	38143744	True	NM_001172226,NM_014898	chr19,chr19	+,-	ZNF540,ZFP30	-57818,2619
chr9:39721067-39721630	chr9	+	39721242	39721666	True	NR_003528,NM_001085452	chr9,chr9	-,+	LOC653501,FAM75A1	-256716,163308
chr9:39721067-39721630	chr9	+	39191940	39192364	False	NM_033655,NM_001085452	chr9,chr9	-,+	CNTNAP3,FAM75A1	95986,163334
chr10:89624076-89624619	chr10	+	89624271	89624639	True	NM_000314,NM_001126049	chr10,chr10	+,-	PTEN,KLLN	-1127,-1077
chr15:75574958-75575398	chr15	+	75575071	75575314	True	NR_030360,NM_001145224	chr15,chr15	-,+	MIR631,GOLGA6D	70769,52
chr15:75574958-75575398	chr15	+	72947109	72947176	False	NR_002780,NM_018652	chr15,chr15	-,+	HIGD2B,GOLGA6B	31371,-131
chr15:75574958-75575398	chr15	-	74374752	74374819	False	NM_001130136,NM_001038640	chr15,chr15	+,-	ISLR2,GOLGA6A	46895,131
chr15:75574958-75575398	chr15	+	75550970	75551037	False	NR_030360,NM_001164404	chr15,chr15	-,+	MIR631,GOLGA6C	95046,-131
chr5:94892568-94894564	chr5	+	94892945	94893951	True	NM_014639,NM_198150	chr5,chr5	-,+	TTC37,ARSK	-2236,-2171
chr1:155239479-155239877	chr1	+	155239479	155239866	True	NM_052837,NM_003993,NM_005698,NM_020897	chr1,chr1,chr1,chr1	-,-,-,+	SCAMP3,CLK2,SCAMP3,HCN3	-7284,3470,-7284,7507
chr3:137729303-137730354	chr3	+	137729420	137730233	True	NM_016369,NM_001170538	chr3,chr3	+,-	CLDN18,DZIP1L	-465,102150
chr14:56585265-56585477	chr14	+	56585268	56585464	True	NR_026797,NM_021255	chr14,chr14	-,+	C14orf34,PELI2	-321876,-226
chr3:195623070-195623333	chr3	+	195623085	195623291	True	NM_001098516,NM_001010938	chr3,chr3	+,-	MUC20,TNK2	-172038,-653
chr19:33211983-33212382	chr19	+	33212008	33212278	True	NM_001110822,NM_032139	chr19,chr19	+,-	TDRD12,ANKRD27	-1380,-45906
chr1:41560415-41562156	chr1	+	41560576	41562193	True	NR_037868,NM_001172222	chr1,chr1	+,-	LOC100507178,SCMH1	-80373,63462
chr20:5092109-5092651	chr20	+	5092375	5092443	True	NM_001009923,NM_182649,NM_001009925,NM_001009924,NR_028370,NM_014145	chr20,chr20,chr20,chr20,chr20,chr20	-,-,-,-,+,-	C20orf30,PCNA,C20orf30,C20orf30,PCNA-AS1,C20orf30	1346,8260,1346,1346,7788,1346
chr15:42481018-42481647	chr15	+	42481199	42481586	True	NM_198141,NR_030357	chr15,chr15	+,-	GANC,MIR627	84779,10339
chr17:71087555-71087782	chr17	+	71087610	71087822	True	NM_001159770,NM_139177,NM_001050	chr17,chr17,chr17	-,-,+	SLC39A11,SLC39A11,SSTR2	1081,1081,73337
chr11:134151538-134151865	chr11	+	134151660	134151778	True	NM_001080407,NM_199298	chr11,chr11	+,-	GLB1L3,THYN1	-5436,-28400
chr11:134151538-134151865	chr11	+	134214669	134214787	False	NM_138342,NM_018644	chr11,chr11	+,-	GLB1L2,B3GAT1	-12952,67075
chr15:86683180-86684603	chr15	+	86683625	86684464	True	NM_022480,NM_152336	chr15,chr15	-,+	KLHL25,AGBL1	-345436,777
chr1:211664956-211665284	chr1	+	211665011	211665331	True	NM_183059,NM_001164688,NR_026761	chr1,chr1,chr1	-,-,+	RD3,RD3,C1orf97	978,978,-108965
chr3:50306702-50306942	chr3	+	50306754	50306942	True	NM_006764,NM_153215,NM_004636,NM_001005914	chr3,chr3,chr3,chr3	-,+,+,+	IFRD2,C3orf45,SEMA3B,SEMA3B	23134,9575,-1765,-1765
chr17:43920911-43921141	chr17_ctg5_hap1	-	946387	946617	False	NM_175882,NR_024559	chr17_ctg5_hap1,chr17_ctg5_hap1	-,+	IMP5,LOC100128977	-1103,-51744
chr17:43920911-43921141	chr17	+	43920922	43921152	True	NM_175882,NR_024559	chr17,chr17	+,-	IMP5,LOC100128977	1103,51777
chr12:62585098-62585455	chr12	+	62585105	62585427	True	NM_178539,NM_006313	chr12,chr12	-,+	FAM19A2,USP15	1174,68759
chrX:134953437-134953643	chrX	+	134953437	134953683	True	NM_001007551,NM_018666,NM_001172288	chrX,chrX,chrX	-,+,-	CT45A5,SAGE1,CT45A5	361,22101,361
chrX:134953437-134953643	chrX	-	134866524	134866770	False	NM_152582,NM_001017436	chrX,chrX	+,+	CT45A2,CT45A4	-361,-361
chrX:134953437-134953643	chrX	-	134883798	134884044	False	NM_001017436,NM_001017435	chrX,chrX	-,+	CT45A4,CT45A3	52741,-361
chrX:134953437-134953643	chrX	+	134936178	134936424	False	NM_018666,NM_001017436	chrX,chrX	+,-	SAGE1,CT45A4	39360,361
chrX:134953437-134953643	chrX	+	134970687	134970933	False	NM_001017438,NM_018666	chrX,chrX	-,+	CT45A6,SAGE1	361,4851
chr1:46905464-46906915	chr1	+	46905754	46906894	True	NM_001097611,NM_001441	chr1,chr1	-,+	KNCN,FAAH	110043,-45870
chrX:148708314-148709957	chrX	+	148708336	148709982	True	NM_001011544,NM_001174092,NM_032508	chrX,chrX,chrX	+,-,-	MAGEA11,TMEM185A,TMEM185A	59920,3555,3555
chr3:195639753-195640203	chr3	+	195639957	195640041	True	NM_001098516,NM_005781	chr3,chr3	+,-	MUC20,TNK2	-188919,-4077
chr1:9649755-9650060	chr1	+	9649762	9650060	True	NM_001130924,NR_027045,NM_001010866	chr1,chr1,chr1	+,-,+	TMEM201,C1orf200,TMEM201	-881,64634,-881
chr2:95691408-95691645	chr2	+	95691466	95691640	True	NR_037597,NM_022440,NM_022438,NM_002371,NM_022439	chr2,chr2,chr2,chr2,chr2	-,+,+,+,+	LOC442028,MAL,MAL,MAL,MAL	-78379,-38,-38,-38,-38
chr19:45994948-45995922	chr19	+	45995213	45995872	True	NM_005619,NM_001080401,NM_206900,NM_206901	chr19,chr19,chr19,chr19	-,+,-,-	RTN2,PPM1N,RTN2,RTN2	4494,5858,4496,657
chr3:119228823-119230246	chr3	+	119229406	119229778	True	NM_016589,NM_018266	chr3,chr3	+,-	C3orf1,TMEM39A	-12092,-46935
chr4:108746694-108747047	chr4	+	108746792	108747100	True	NM_001136258,NM_005443	chr4,chr4	+,-	SGMS2,PAPSS1	-1122,-105373
chr8:6573485-6574208	chr8	+	6573485	6573756	True	NM_018361,NM_207411	chr8,chr8	+,-	AGPAT5,XKR5	-7660,119461
chr3:170747912-170749067	chr3	+	170748053	170748837	True	NM_000340,NM_001185056	chr3,chr3	-,+	SLC2A2,CLDN11	-3285,-609078
chr12:102091658-102091935	chr12	+	102091711	102091935	True	NM_020244,NM_001177948	chr12,chr12	+,-	CHPT1,SYCP3	-345,41365
chr4:121845167-121846277	chr4	+	121845248	121846328	True	NM_018699,NR_024365	chr4,chr4	-,+	PRDM5,LOC100192379	-1235,839411
chr12:7282949-7283648	chr12	+	7283023	7283564	True	NM_014718,NM_031491	chr12,chr12	+,-	CLSTN3,RBP5	-107,-1557
chr16:325140-325387	chr16	+	325173	325353	True	NM_006849,NM_183337,NM_001176,NM_003834	chr16,chr16,chr16,chr16	+,-,+,-	PDIA2,RGS11,ARHGDIG,RGS11	7764,611,5252,611
chr1:174988508-174989803	chr1	+	174988718	174989502	True	NR_037606,NM_014412,NM_022100	chr1,chr1,chr1	-,+,-	MRPS14,CACYBP,MRPS14	3145,-19877,3145
chr21:46845187-46845569	chr21	+	46845201	46845491	True	NM_130445,NR_028082,NR_027498	chr21,chr21,chr21	+,-,-	COL18A1,NCRNA00175,NCRNA00175	-20155,-246,-216
chr14:76842768-76843081	chr14	+	76842776	76843058	True	NM_004452,NM_003239	chr14,chr14	+,-	ESRRB,TGFB3	-5137,-394684
chr17:73978029-73978882	chr17	+	73978150	73978636	True	NM_001113324,NM_001185039,NM_007292,NR_037709,NM_004035	chr17,chr17,chr17,chr17,chr17	+,-,-,+,-	C17orf106,ACOX1,ACOX1,C17orf106-CDK3,ACOX1	-2906,-2635,-2635,-2906,-2635
chr2:239048981-239049259	chr2	+	239049015	239049291	True	NM_198582,NM_030768	chr2,chr2	+,-	KLHL30,ILKAP	-1703,63083
chr10:102089037-102089433	chr10	+	102089185	102089401	True	NM_016112,NM_005063	chr10,chr10	-,+	PKD2L1,SCD	892,17370
chr17:46621437-46621899	chr17	+	46621519	46621633	True	NM_002145,NR_033201	chr17,chr17	-,+	HOXB2,LOC404266	816,46189
chr11:128560460-128561440	chr11	+	128560492	128561330	True	NM_001167681,NM_002017,NM_001143820	chr11,chr11,chr11	+,+,-	FLI1,FLI1,ETS1	2480,2482,-103039
chr17:10557365-10558327	chr17	+	10557603	10558365	True	NM_002470,NM_020233	chr17,chr17	-,+	MYH3,C17orf48	1150,42561
chr1:110951166-110952826	chr1	+	110951409	110952716	True	NM_032414,NM_006402	chr1,chr1	+,-	PROK1,HBXIP	41071,-863
chr1:228332500-228332968	chr1	+	228332597	228333001	True	NM_000858,NM_020435,NM_181465,NM_001159390,NM_001159391	chr1,chr1,chr1,chr1,chr1	+,+,-,+,+	GUK1,GJC2,MRPL55,GUK1,GUK1	-4719,4551,-35584,-4719,-244
chr10:10839622-10840499	chr10	+	10839723	10840504	True	NR_027082,NM_001025077	chr10,chr10	-,+	SFTA1P,CELF2	-2846,206754
chr17:26645900-26646274	chr17	+	26645926	26646098	True	NM_014573,NR_028334	chr17,chr17	+,-	TMEM97,FLJ40504	22,-11518
chr21:42690384-42691063	chr21	+	42690502	42691106	True	NM_058186,NM_206964,NM_182832	chr21,chr21,chr21	+,+,-	FAM3B,FAM3B,PLAC4	-1892,-1892,-133336
chr1:15248366-15249142	chr1	+	15248570	15249048	True	NM_001018000,NM_001018001,NR_027136	chr1,chr1,chr1	+,+,-	KAZN,KAZN,C1orf126	1576,7247,229962
chr7:99100502-99101068	chr7	+	99100941	99101073	True	NM_145102,NM_014569,NM_032164	chr7,chr7,chr7	+,+,-	ZKSCAN5,ZKSCAN5,ZNF394	1199,1499,-3064
chr5:156774373-156775510	chr5	+	156774382	156775193	True	NM_001001343,NM_014376	chr5,chr5	-,+	FNDC9,CYFIP2	-1653,-78071
chr6:56707654-56707997	chr6	+	56707695	56707979	True	NM_152731,NM_001723	chr6,chr6	+,-	BEND6,DST	111793,-200001
chr8:29210590-29211095	chr8	+	29210648	29211114	True	NM_057158,NM_001394,NM_024567	chr8,chr8,chr8	-,-,+	DUSP4,DUSP4,HMBOX1	-4326,-2381,-462474
chr7:134139117-134140493	chr7	+	134139116	134140196	True	NM_001628,NM_020299	chr7,chr7	-,+	AKR1B1,AKR1B10	3742,72147
chr1:32042127-32042349	chr1	+	32042126	32042378	True	NM_001204414,NM_001204415,NM_022164,NR_033688	chr1,chr1,chr1,chr1	+,+,+,-	TINAGL1,TINAGL1,TINAGL1,PEF1	-91,1367,-91,67890
chr20:56067031-56068439	chr20	+	56067098	56068300	True	NM_002591,NM_080618	chr20,chr20	+,-	PCK1,CTCFL	67836,31910
chr18:7567521-7567748	chr18	+	7567523	7567753	True	NM_005559,NM_002845,NM_001105244	chr18,chr18,chr18	-,+,+	LAMA1,PTPRM,PTPRM	-449710,-260,-260
chr4:154682291-154682574	chr4	+	154682381	154682603	True	NM_173662,NM_003264	chr4,chr4	-,+	RNF175,TLR2	-994,-76998
chr1:6265129-6265621	chr1	+	6265187	6265489	True	NM_000983,NM_207396	chr1,chr1	-,+	RPL22,RNF207	-5508,699
chr17:73901942-73903160	chr17	+	73902084	73902863	True	NM_173547,NM_001113324,NM_032478	chr17,chr17,chr17	-,+,-	TRIM65,C17orf106,MRPL38	-9030,72434,-903
chr19:44100270-44100553	chr19	+	44100417	44100601	True	NM_001007561,NM_024327,NM_001145347	chr19,chr19,chr19	-,+,+	IRGQ,ZNF576,ZNF576	-130,16,136
chr19:36269461-36270490	chr19	+	36269629	36270314	True	NM_052948,NM_144617,NM_001172630	chr19,chr19,chr19	+,-,+	ARHGAP33,HSPB6,ARHGAP33	-3271,-21699,-3271
chr3:187001649-187002144	chr3	+	187001661	187002107	True	NM_001879,NM_139125,NR_033519,NM_022147,NM_001031849	chr3,chr3,chr3,chr3,chr3	-,-,-,+,-	MASP1,MASP1,MASP1,RTP4,MASP1	7753,7753,7753,84060,7753
chr1:33806891-33808425	chr1	+	33807103	33808462	True	NM_004427,NR_037400,NM_152493	chr1,chr1,chr1	-,-,+	PHC2,MIR3605,ZNF362	7088,-9010,-84981
chrX:18456344-18456764	chrX	+	18456521	18456619	True	NM_001037343,NR_033717	chrX,chrX	+,-	CDKL5,SCML2	3724,-83677
chr1:26641134-26642241	chr1	+	26641197	26642149	True	NM_145345,NM_001077262,NM_183008,NM_001803	chr1,chr1,chr1,chr1	-,-,-,+	UBXN11,UBXN11,UBXN11,CD52	2658,-8002,-8002,2261
chr6:165446023-165447802	chr6	+	165446028	165447838	True	NM_144980,NR_027284	chr6,chr6	-,+	C6orf118,LOC441177	275323,953200
chr1:26492525-26494408	chr1	+	26492535	26493707	True	NM_015871,NM_024869,NM_032588	chr1,chr1,chr1	+,+,-	ZNF593,GRRP1,TRIM63	2680,-7075,-98414
chr13:19784270-19784724	chr13	+	19784499	19784717	True	NM_006001,NR_034026	chr13,chr13	-,+	TUBA3C,LOC100287114	-28507,134471
chr15:69098696-69099704	chr15	+	69098753	69099671	True	NR_031680,NR_026808,NR_036197	chr15,chr15,chr15	+,-,-	MIR548H4,C15orf28,MIR4312	16631,-21,-4489
chr8:40758948-40760728	chr8	+	40758959	40760433	True	NM_001174124,NM_024645,NM_001135731	chr8,chr8,chr8	+,-,-	GOLGA7,ZMAT4,ZMAT4	587647,-3616,-3616
chr14:104387104-104387675	chr14	+	104387185	104387569	True	NM_001127393,NM_153046,NM_004894	chr14,chr14,chr14	-,+,-	C14orf2,TDRD9,C14orf2	384,7247,384
chr4:9500850-9502492	chr4	+	9500914	9502086	True	NR_031688,NM_001040448	chr4,chr4	-,+	MIR548I2,DEFB131	55901,-54705
chr16:30583983-30584521	chr16	+	30584167	30584572	True	NM_001024683,NM_145271,NM_024031	chr16,chr16,chr16	-,-,+	ZNF688,ZNF688,PRR14	-439,-439,77668
chrX:119031415-119032474	chrX	+	119031441	119032385	True	NM_178813,NM_006978,NM_001008535,NM_001008534	chrX,chrX,chrX,chrX	+,-,+,+	AKAP14,RNF113A,AKAP14,AKAP14	-1564,-25650,-1564,-1564
chr12:46367425-46367829	chr12	+	46367656	46367849	True	NM_152641,NM_004719	chr12,chr12	+,-	ARID2,SCAF11	-244100,16611
chr19:45997609-45997872	chr19	+	45997625	45997717	True	NM_005619,NM_001080401,NM_206900,NM_206901	chr19,chr19,chr19,chr19	-,+,-,-	RTN2,PPM1N,RTN2,RTN2	2644,4013,2646,-1151
chr22:44577953-44578637	chr22	+	44577984	44578584	True	NR_024426,NR_024427,NM_022141,NM_001099294,NM_001137605,NM_001137606,NR_024428	chr22,chr22,chr22,chr22,chr22,chr22,chr22	+,+,+,-,+,+,+	PARVG,PARVG,PARVG,KIAA1644,PARVG,PARVG,PARVG	-1265,-9199,-1265,130197,-9199,-778,-819
chr11:3513139-3513760	chr11	+	3513213	3513805	True	NM_007152,NR_024248	chr11,chr11	-,+	ZNF195,LOC650368	-112765,-111073
chr1:171710603-171710888	chr1	+	171710648	171710858	True	NM_001007239,NM_003762,NR_033704,NM_001185127	chr1,chr1,chr1,chr1	+,-,-,-	METTL13,VAMP4,VAMP4,VAMP4	39902,571,571,571
chr16:20750862-20751640	chr16	+	20751247	20751359	True	NM_202000,NM_017736	chr16,chr16	+,-	ACSM3,THUMPD1	23952,1890
chr16:3552366-3552756	chr16	+	3552501	3552739	True	NM_015041,NM_024793,NM_001080524	chr16,chr16,chr16	+,+,-	CLUAP1,CLUAP1,C16orf90	-1595,7154,-7080
chr17:42770452-42771917	chr17	+	42770764	42771893	True	NM_001099225,NM_144609,NR_036623	chr17,chr17,chr17	-,-,+	CCDC43,CCDC43,DBF4B	-3599,-3599,14082
chr15:83164879-83166476	chr15	+	83165068	83166394	True	NR_026811,NR_033579	chr15,chr15	-,+	LOC80154,LOC440297	16557,-35089
chr15:83164879-83166476	chr15	-	82950694	82951400	False	NR_026811,NR_033936,NR_033579	chr15,chr15,chr15	+,+,-	LOC80154,LOC727849,LOC440297	-5923,-5952,35080
chr15:83164879-83166476	chr15	+	84892283	84893163	False	NR_027001,NR_033738	chr15,chr15	-,+	LOC388152,LOC440300	5809,-31737
chr15:83164879-83166476	chr15	+	85771389	85772269	False	NM_006738,NM_014300	chr15,chr15	+,-	AKAP13,SEC11A	151601,-511715
chr5:121297048-121297361	chr5	+	121297052	121297400	True	NM_152546,NM_001178102	chr5,chr5	+,-	SRFBP1,LOX	255,115568
chr9:90108714-90110435	chr9	+	90109016	90110474	True	NR_036691,NM_004938	chr9,chr9	-,+	LOC494127,DAPK1	-408876,2281
chr8:22435539-22435821	chr8	+	22435547	22435821	True	NR_027715,NM_198042,NM_021630,NM_176871	chr8,chr8,chr8,chr8	-,+,+,+	FLJ14107,PDLIM2,PDLIM2,PDLIM2	63951,2165,432,2165
chr8:42127076-42127651	chr8	+	42127391	42127691	True	NM_001190720,NM_001190721,NM_001190722,NR_033818,NR_033819,NM_033011,NR_033820,NM_001556	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	+,+,+,+,+,-,+,+	IKBKB,IKBKB,IKBKB,IKBKB,IKBKB,PLAT,IKBKB,IKBKB	1144,1183,1128,1128,1128,-62197,1128,1128
chr20:2517847-2518302	chr20	+	2517882	2518294	True	NM_024325,NM_080751	chr20,chr20	-,+	ZNF343,TMC2	-28104,-680
chr5:118966159-118967613	chr5	+	118966495	118967546	True	NM_173666,NM_182761,NM_001163991	chr5,chr5,chr5	-,+,+	DTWD2,FAM170A,FAM170A	-642255,-1292,-1292
chr19:50167044-50167416	chr19	+	50167230	50167465	True	NM_001040668,NM_001197128,NM_001571,NM_001197126,NM_001197127,NM_138639,NM_001197125,NM_001197124,NM_001197123,NM_001197122	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,-,-,-,+,-,-,-,-	BCL2L12,IRF3,IRF3,IRF3,IRF3,BCL2L12,IRF3,IRF3,IRF3,IRF3	933,1717,1717,1717,1717,933,1717,1717,1717,1717
chr9:96867450-96867872	chr9	+	96867477	96867680	True	NM_021570,NM_152422	chr9,chr9	-,+	BARX1,PTPDC1	-149869,-20789
chr17:6775453-6777261	chr17	+	6775524	6777175	True	NM_053285,NR_002710	chr17,chr17	-,+	TEKT1,ALOX12P2	-40464,-18680
chrX:70987970-70988877	chrX	+	70988029	70988757	True	NR_001568,NM_001145140,NM_001145139	chrX,chrX,chrX	-,+,+	BCYRN1,CXorf49,CXorf49B	-39067,-4940,-4940
chrX:70987970-70988877	chrX	-	70932517	70933245	False	NR_034005,NM_001145140,NM_001145139	chrX,chrX,chrX	+,-,-	FLJ46446,CXorf49,CXorf49B	-15522,4940,4940
chr15:72667637-72668086	chr15	+	72667668	72668132	True	NR_027262,NM_000520	chr15,chr15	+,-	C15orf34,HEXA	321,438
chr11:67120457-67120833	chr11	+	67120456	67120874	True	NM_021173,NR_024469	chr11,chr11	-,+	POLD4,LOC100130987	228,-35197
chr12:110173425-110174277	chr12	+	110173560	110174292	True	NM_032829,NR_026661	chr12,chr12	+,-	C12orf34,MGC14436	-21426,37047
chr8:144719878-144720620	chr8	+	144720025	144720629	True	NM_001082480,NM_003313	chr8,chr8	+,-	ZNF623,TSTA3	-1710,-20293
chr1:114523089-114523754	chr1	+	114523088	114523715	True	NM_006594,NM_020190	chr1,chr1	-,+	AP4B1,OLFML3	-75347,-1109
chr4:177111180-177112538	chr4	+	177111604	177112592	True	NM_144644,NM_181265	chr4,chr4	-,+	SPATA4,WDR17	4285,-124670
chr11:134147177-134147734	chr11	+	134147256	134147669	True	NM_001080407,NM_199298	chr11,chr11	+,-	GLB1L3,THYN1	-1032,-23996
chr17:56594855-56595095	chr17	+	56594854	56594976	True	NM_002876,NM_004687	chr17,chr17	+,-	RAD51C,MTMR4	174986,325
chr4:138441464-138442660	chr4	+	138441859	138442699	True	NM_012118,NM_019035	chr4,chr4	+,-	CCRN4L,PCDH18	1494243,10980
chr3:128968131-128968346	chr3	+	128968177	128968395	True	NM_003418,NM_016128	chr3,chr3	-,+	CNBP,COPG	-65367,57
chr1:180199847-180200099	chr1	+	180199927	180200145	True	NR_037642,NM_033343	chr1,chr1	-,+	LOC100527964,LHX4	43721,-545
chr17:19313754-19314297	chr17	+	19313768	19314338	True	NM_002404,NM_007148	chr17,chr17	-,+	MFAP4,RNF112	-23236,152
chr22:30821441-30821781	chr22	+	30821522	30821762	True	NM_001017981,NM_001003704,NM_016498	chr22,chr22,chr22	-,+,+	RNF215,MTFP1,MTFP1	-38220,38,38
chr19:11373357-11373561	chr19	+	11373407	11373541	True	NM_020812,NM_018687	chr19,chr19	-,+	DOCK6,LOC55908	-250,-23163
chr22:23522729-23522945	chr22	+	23522799	23522905	True	NM_004327,NM_021574,NM_014433	chr22,chr22,chr22	+,+,-	BCR,BCR,RTDR1	-298,-298,-38558
chr16:89622826-89623094	chr16	+	89622844	89623124	True	NM_033251,NR_002450,NM_000977,NM_013275	chr16,chr16,chr16,chr16	+,+,+,-	RPL13,SNORD68,RPL13,ANKRD11	4006,4713,3965,-65875
chr9:99322512-99323688	chr9	+	99322555	99323727	True	NM_001077181,NM_014282	chr9,chr9	-,+	CDC14B,HABP4	5526,-110192
chr1:111825302-111825911	chr1	+	111825332	111825888	True	NR_003928,NM_021797,NM_024901,NM_201653	chr1,chr1,chr1,chr1	+,+,-,+	LOC149620,CHIA,DENND2D,CHIA	-2237,7595,-82051,7649
chr1:112941908-112943305	chr1	+	112942061	112943006	True	NM_018704,NR_036210	chr1,chr1	+,-	CTTNBP2NL,MIR4256	-3312,61506
chr20:47892051-47894031	chr20	+	47892211	47893698	True	NR_003605,NR_003604,NR_002433,NR_003606,NR_003695,NR_036658,NR_036659,NM_021035,NR_003030	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,+,+,+,+,+,+,-,+	NCRNA00275,NCRNA00275,SNORD12C,NCRNA00275,SNORD12B,NCRNA00275,NCRNA00275,ZNFX1,SNORD12	1016,1016,1783,1016,3151,1016,1480,1108,3521
chr17:28621850-28622403	chr17	+	28621920	28622422	True	NM_001304,NM_000386	chr17,chr17	+,-	CPD,BLMH	83519,-2736
chr12:6054704-6055136	chr12	+	6054717	6055083	True	NM_020373,NM_001769	chr12,chr12	-,+	ANO2,CD9	365,254398
chr17:6917755-6918038	chr17	+	6917785	6917979	True	NR_030178,NM_001142799,NM_001004333,NM_001142798,NM_174893,NR_037715,NR_037716,NR_037717,NR_029712,NM_181844	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,+,+,+,+,+,+,-,+	MIR497,C17orf49,RNASEK,C17orf49,C17orf49,RNASEK,RNASEK,RNASEK-C17ORF49,MIR195,BCL6B	3412,76,-2100,76,76,-2100,-2100,-2100,3091,8389
chr8:54757364-54757854	chr8	+	54757387	54757803	True	NM_015941,NM_170587,NM_213619,NM_213620	chr8,chr8,chr8,chr8	-,+,-,-	ATP6V1H,RGS20,ATP6V1H,ATP6V1H	-1537,6564,-1537,-1840
chr14:91977204-91978111	chr14	+	91977288	91977608	True	NM_032560,NR_003709	chr14,chr14	-,+	SMEK1,SNORA11B	-644,-384569
chr15:25477883-25478710	chr15	+	25477982	25478750	True	NR_003353,NR_003358,NR_003345,NR_003346,NR_003344,NR_003352,NR_003351,NR_003350,NM_130838,NR_003354,NR_003347,NR_003303,NR_003348,NR_003349	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,-,+,+,+,+,+	SNORD115-38,SNORD115-43,SNORD115-30,SNORD115-31,SNORD115-29,SNORD115-37,SNORD115-36,SNORD115-35,UBE3A,SNORD115-39,SNORD115-32,SNORD115-11,SNORD115-33,SNORD115-34	6234,2481,-7683,-5777,2481,4382,2481,643,171953,8142,-3919,2481,-2048,-499
chr17:21277241-21279054	chr17	+	21277425	21278681	True	NM_152914,NM_021012	chr17,chr17	-,+	C17orf103,KCNJ12	-120847,1017
chr12:49989622-49991104	chr12	+	49989793	49990915	True	NM_012272,NR_027450,NM_032130	chr12,chr12,chr12	+,-,-	PRPF40B,FAM186B,FAM186B	26487,8545,8568
chr15:66084680-66084952	chr15	+	66084753	66084947	True	NM_004663,NM_005848,NM_001144823	chr15,chr15,chr15	+,-,-	RAB11A,DENND4A,DENND4A	76848,-122,-122
chr22:42473211-42473476	chr22	+	42473280	42473468	True	NM_033318,NM_001002034,NM_000262	chr22,chr22,chr22	+,+,-	C22orf32,FAM109B,NAGA	2230,-3076,-6434
chr4:2211480-2212369	chr4	+	2211663	2211959	True	NM_181808,NM_178557	chr4,chr4	-,+	POLN,NAT8L	19051,-150483
chr5:68715046-68715515	chr5	+	68715217	68715553	True	NM_001015892,NM_001038603	chr5,chr5	-,+	TAF9,MARVELD2	-49377,-4329
chr17:80605027-80605348	chr17	+	80605122	80605242	True	NM_019613,NM_024619	chr17,chr17	-,+	WDR45L,FN3KRP	1219,69339
chrX:38420898-38421177	chrX	+	38420898	38421200	True	NM_001034853,NM_004615	chrX,chrX	-,+	RPGR,TSPAN7	-234110,-218
chr1:223901257-223901700	chr1	+	223901370	223901732	True	NM_001143962,NM_001748	chr1,chr1	-,+	CAPN8,CAPN2	-47934,-1302
chr1:121258359-121260264	chr1	+	121258472	121259656	True	NR_003955,NM_001017986	chr1,chr1	+,-	EMBP1,FCGR1B	1253,-322528
chr17:37618218-37618680	chr17	+	37618413	37618719	True	NM_004774,NM_016507,NM_015083	chr17,chr17,chr17	-,+,+	MED1,CDK12,CDK12	-10886,-725,-725
chr15:73656881-73658018	chr15	+	73657102	73657970	True	NM_001042367,NM_005477	chr15,chr15	+,-	C15orf60,HCN4	77528,3685
chr3:125652647-125653322	chr3	+	125653023	125653341	True	NM_001015050,NR_024251,NM_001195223	chr3,chr3,chr3	-,+,-	ALG1L,LOC100125556,ALG1L	2596,-17630,2596
chr1:36917742-36918024	chr1	+	36917747	36918067	True	NM_145047,NM_024676,NM_206837	chr1,chr1,chr1	-,+,-	OSCP1,SH3D21,OSCP1	-1661,-145090,-1661
chr15:41170596-41171456	chr15	+	41170612	41171354	True	NM_020857,NM_133639	chr15,chr15	+,-	VPS18,RHOV	15273,-4125
chr9:135282254-135284129	chr9	+	135282283	135284129	True	NM_007344,NM_207417	chr9,chr9	-,+	TTF1,C9orf171	-62,1481
chrX:43832523-43833280	chrX	+	43832668	43833260	True	NM_000266,NM_000240	chrX,chrX	-,+	NDP,MAOA	7,-317310
chr13:20136987-20138759	chr13	+	20137343	20138667	True	NM_199254,NM_017520	chr13,chr13	-,+	TPTE2,MPHOSPH8	-26440,69120
chr6:26198649-26199331	chr6	+	26198884	26199212	True	NM_021065,NM_003545,NM_003539,NM_003530,NM_003522	chr6,chr6,chr6,chr6,chr6	-,+,-,-,+	HIST1H2AD,HIST1H4E,HIST1H4D,HIST1H3D,HIST1H2BF	309,5660,-9580,302,574
chr1:155274147-155275255	chr1	+	155274246	155275098	True	NM_001135822,NM_002004,NM_000298,NM_181871,NM_001135821	chr1,chr1,chr1,chr1,chr1	+,+,-,-,+	FDPS,FDPS,PKLR,PKLR,FDPS	3440,3440,-3021,-3454,3606
chr1:32643406-32643899	chr1	+	32643409	32643806	True	NM_175852,NM_019118	chr1,chr1	+,-	TXLNA,TMEM234	1538,44171
chr17:37848265-37849082	chr17	+	37848395	37849000	True	NM_004448,NM_001005862,NM_033419	chr17,chr17,chr17	+,+,-	ERBB2,ERBB2,PGAP3	7253,-4066,-4085
chr13:35548257-35549103	chr13	+	35548262	35549140	True	NM_005584,NM_015678	chr13,chr13	-,+	MAB21L1,NBEA	501742,-31889
chr2:87304473-87306098	chr2	+	87304580	87305956	True	NR_026846,NM_001024457	chr2,chr2	-,+	LOC285074,RGPD1	-1044,-159893
chr2:87304473-87306098	chr2	-	86945384	86946392	False	NM_022780,NM_001198954	chr2,chr2	+,-	RMND5A,RNF103-VPS24	1021,1903
chr19:18550496-18550806	chr19	+	18550576	18550671	True	NM_032627,NM_001170939,NM_001170938,NM_016368	chr19,chr19,chr19,chr19	+,-,-,-	SSBP4,ISYNA1,ISYNA1,ISYNA1	-20482,-1655,-1465,-1465
chr2:220406793-220407162	chr2	+	220406982	220407152	True	NR_036082,NM_001005209,NM_001195731,NM_024536	chr2,chr2,chr2,chr2	-,+,-,-	MIR3132,TMEM198,CHPF,CHPF	6767,1592,717,1385
chr4:2820563-2820784	chr4	+	2820568	2820652	True	NM_001145855,NM_001145856,NM_024309,NM_003023	chr4,chr4,chr4,chr4	+,+,-,+	SH3BP2,SH3BP2,TNIP2,SH3BP2	-6673,-707,-62465,-78
chr2:134328465-134329696	chr2	+	134328513	134329715	True	NM_207363,NM_207481,NR_037450	chr2,chr2,chr2	-,-,+	NCKAP5,NCKAP5,MIR3679	-2482,-2482,554980
chr2:178062761-178063028	chr2	+	178062802	178062980	True	NM_194247,NR_036075	chr2,chr2	+,-	HNRNPA3,MIR3128	14441,57808
chr14:74954711-74956496	chr14	+	74954776	74956464	True	NM_194279,NM_006432	chr14,chr14	+,-	ISCA2,NPC2	3985,3670
chr3:132756326-132756641	chr3	+	132756352	132756592	True	NM_153240,NM_023943,NM_001136469	chr3,chr3,chr3	-,+,+	NPHP3,TMEM108,TMEM108	-315049,578,578
chr19:17137097-17137345	chr19	+	17137133	17137205	True	NM_001130065,NM_015692	chr19,chr19	+,-	MYO9B,CPAMD8	49385,470
chr5:143192356-143192677	chr5	+	143192431	143192634	True	NM_021182,NM_001024947	chr5,chr5	+,-	HMHB1,YIPF5	-759,357694
chr11:66109565-66110257	chr11	+	66109634	66110306	True	NM_153266,NM_015399,NM_006876,NM_001024957,NM_004292	chr11,chr11,chr11,chr11,chr11	+,-,-,-,-	TMEM151A,BRMS1,B3GNT1,BRMS1,RIN1	-50312,2326,4905,2326,-5634
chr2:198611546-198612852	chr2	+	198611702	198612737	True	NM_033030,NM_138395	chr2,chr2	-,+	BOLL,MARS2	37387,-41731
chrX:48163391-48164156	chrX	+	48163396	48164104	True	NM_021014,NM_005635	chrX,chrX	-,+	SSX3,SSX1	52088,-48650
chrX:48163391-48164156	chrX	+	52681654	52682279	False	NR_027250,NM_173358	chrX,chrX	+,-	SSX8,SSX7	-29720,1721
chr20:38713186-38714404	chr20	+	38713740	38714442	True	NM_003286,NM_005461	chr20,chr20	+,-	TOP1,MAFB	943019,603484
chr17:37853066-37853768	chr17	+	37853104	37853595	True	NM_033419,NM_001005862,NM_004448	chr17,chr17,chr17	-,+,+	PGAP3,ERBB2,ERBB2	-8794,-8762,2658
chr4:119462509-119464203	chr4	+	119462661	119464259	True	NR_003135,NM_003619	chr4,chr4	+,-	CEP170P1,PRSS12	-25228,-188739
chr4:119462509-119464203	chr1	-	243301540	243301903	False	NM_006642,NR_029401	chr1,chr1	+,-	SDCCAG8,LOC731275	117403,-36494
chr9:77567893-77568927	chr9	+	77567980	77568785	True	NM_012383,NM_017998	chr9,chr9	+,-	OSTF1,C9orf40	134612,-178
chr3:169900843-169901216	chr3	+	169900849	169901092	True	NM_002740,NM_024947	chr3,chr3	+,-	PRKCI,PHC3	39127,-1312
chr12:9100024-9102010	chr12	+	9100086	9102042	True	NM_004426,NM_002355	chr12,chr12	+,-	PHC1,M6PR	-32829,260
chr13:46420315-46420961	chr13	+	46420517	46420998	True	NM_198849,NM_152719	chr13,chr13	-,+	SIAH3,SPERT	4898,-144128
chr20:32581275-32581508	chr20	+	32581287	32581555	True	NM_016732,NM_007367,NM_003908	chr20,chr20,chr20	+,+,-	RALY,RALY,EIF2S2	176,176,118580
chr1:32281720-32283652	chr1	+	32281834	32283700	True	NM_144569,NM_006559	chr1,chr1	-,+	SPOCD1,KHDRBS1	-254,195790
chr18:72919066-72920097	chr18	+	72919359	72920123	True	NM_005786,NM_175907	chr18,chr18	+,-	TSHZ1,ZADH2	2607,1208
chr9:15422254-15422568	chr9	+	15422290	15422594	True	NM_021144,NM_001039697	chr9,chr9	-,+	PSIP1,SNAPC3	87743,187
chr12:13352367-13353856	chr12	+	13352374	13353894	True	NM_001080555,NM_001423	chr12,chr12	-,+	GSG1,EMP1	-95755,-2823
chr1:161015870-161017621	chr1	+	161015909	161017350	True	NM_001113206,NM_001113207,NM_001113205,NR_033385,NM_207005,NM_007122	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,-	TSTD1,TSTD1,TSTD1,KLHDC9,USF1,USF1	-7135,-7135,-7135,50800,-152,-152
chr10:25243780-25245688	chr10	+	25243790	25245289	True	NM_020200,NM_024838	chr10,chr10	-,+	PRTFDC1,THNSL1	-2257,60218
chr22:19466767-19467440	chr22	+	19466801	19467419	True	NM_005659,NM_001178010,NM_001178011,NM_001035247,NM_003504	chr22,chr22,chr22,chr22,chr22	-,+,+,-,+	UFD1L,CDC45,CDC45,UFD1L,CDC45	-63,-6,-6,-63,-4
chr4:8201933-8202380	chr4	+	8202184	8202352	True	NM_001130088,NM_018986	chr4,chr4	-,+	ABLIM2,SH3TC1	-41625,-1175
chr3:170076888-170077103	chr3	+	170076889	170077111	True	NM_001145098,NM_005414,NM_024947,NM_001145097	chr3,chr3,chr3,chr3	+,+,-,+	SKIL,SKIL,PHC3,SKIL	-1477,-1477,-177352,299
chr9:98267557-98268170	chr9	+	98267557	98268141	True	NM_001010895,NM_001083607,NM_001083604,NM_001083605,NM_001083606,NM_000264	chr9,chr9,chr9,chr9,chr9,chr9	+,-,-,-,-,-	C9orf102,PTCH1,PTCH1,PTCH1,PTCH1,PTCH1	369758,1390,2231,2231,1608,2740
chrX:13401561-13402840	chrX	+	13401566	13402563	True	NM_001167890,NM_001135995	chrX,chrX	+,-	EGFL6,ATXN3L	185130,-63048
chr1:239807116-239807965	chr1	+	239807199	239808003	True	NM_000740,NM_022469	chr1,chr1	+,-	CHRM3,GREM2	-14890,967509
chr15:89350797-89351801	chr15	+	89350899	89351690	True	NM_001135,NM_178232,NM_013227	chr15,chr15,chr15	+,-,+	ACAN,HAPLN3,ACAN	-4277,87131,-4277
chr6:160543355-160544353	chr6	+	160543528	160544272	True	NM_003058,NM_153187,NM_003057	chr6,chr6,chr6	-,+,+	SLC22A2,SLC22A1,SLC22A1	135741,-717,-717
chrX:48959355-48960085	chrX	+	48959492	48960134	True	NM_001163323,NM_007075	chrX,chrX	+,-	CCDC120,WDR45	-43020,-1433
chrX:48959355-48960085	chrX	+	48536449	48536501	False	NM_013271,NM_000377	chrX,chrX	-,+	PCSK1N,WAS	157511,5684
chr2:120771056-120771305	chr2	+	120771109	120771354	True	NM_020909,NM_001184937,NM_001184938,NM_001184939,NR_000034	chr2,chr2,chr2,chr2,chr2	+,+,+,+,-	EPB41L5,EPB41L5,EPB41L5,EPB41L5,TMEM185B	-556,-556,-375,-556,209680
chr11:67710349-67711962	chr11	+	67710693	67711421	True	NM_030930,NM_001161473	chr11,chr11	-,+	UNC93B1,ALDH3B1	60222,64626
chr17:42277220-42277498	chr17	+	42277282	42277457	True	NM_020218,NM_177441,NM_001098833	chr17,chr17,chr17	-,+,-	ATXN7L3,TMUB2,ATXN7L3	-1753,-12759,-1753
chr17:4403278-4403975	chr17	+	4403565	4403991	True	NM_001124758,NM_001105538	chr17,chr17	+,-	SPNS2,MYBBP1A	-1488,54740
chr10:26731299-26732070	chr10	+	26731374	26732030	True	NM_001012750,NM_019043	chr10,chr10	-,+	ABI1,APBB1IP	418046,-4159
chrX:112053656-112054366	chrX	+	112054108	112054316	True	NM_001004308,NM_001113490	chrX,chrX	+,-	ZCCHC16,AMOT	-727906,12088
chr3:149779301-149779526	chr3	+	149779336	149779560	True	NM_053024,NR_036538	chr3,chr3	-,+	PFN2,LOC646903	-90595,-90321
chr12:23730292-23730977	chr12	+	23730477	23730739	True	NR_030625,NM_178010	chr12,chr12	+,-	MIR920,SOX5	634615,6831
chr21:35986229-35986815	chr21	+	35986233	35986673	True	NM_203417,NM_004414,NM_053277	chr21,chr21,chr21	-,-,+	RCAN1,RCAN1,CLIC6	122,759,55014
chr16:575089-576326	chr16	+	575248	576222	True	NM_005632,NR_024121	chr16,chr16	+,-	SOLH,NCRNA00235	1633,1235
chrX:20132309-20134262	chrX	+	20132536	20134115	True	NM_152780,NM_001173456,NM_001168465,NM_001168466,NM_001168467	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	MAP7D2,PDHA1,MAP7D2,MAP7D2,MAP7D2	1049,-770588,1049,1049,691
chr11:1715604-1715840	chr11	+	1715636	1715698	True	NR_026642,NM_001012416	chr11,chr11	-,+	FAM99B,KRTAP5-6	-8777,2726
chrX:18376862-18378416	chrX	+	18376865	18378453	True	NM_006089,NR_033717,NM_003159	chrX,chrX,chrX	-,-,+	SCML2,SCML2,CDKL5	-4021,-4021,65271
chr16:88771946-88772268	chr16	+	88772017	88772231	True	NM_001171816,NM_001171815,NM_001012759,NM_178841,NM_001012762	chr16,chr16,chr16,chr16,chr16	-,-,+,-,+	RNF166,RNF166,CTU2,RNF166,CTU2	-1992,619,659,648,659
chr5:132111484-132112243	chr5	+	132111517	132112143	True	NM_001039780,NM_001098811,NM_001098813,NM_015146,NM_001098812	chr5,chr5,chr5,chr5,chr5	+,-,-,-,-	CCNI2,SEPT8,SEPT8,SEPT8,SEPT8	-28438,974,1468,974,974
chr6:64371147-64372100	chr6	+	64371147	64371786	True	NM_015153,NM_016571	chr6,chr6	+,-	PHF3,LGSN	-14772,-341265
chr11:68229848-68230561	chr11	+	68229899	68230564	True	NM_018312,NM_001164164,NM_001164161,NM_001164160,NM_001164163,NM_001164162,NM_022338	chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,+,-	PPP6R3,PPP6R3,PPP6R3,PPP6R3,PPP6R3,PPP6R3,C11orf24	-1764,-1764,-1764,-1764,-1764,-1764,-190430
chr9:134166309-134166584	chr9	+	134166457	134166519	True	NM_032728,NM_033387	chr9,chr9	+,-	PPAPDC3,FAM78A	-1428,-14551
chr5:82770253-82770488	chr5	+	82770253	82770455	True	NM_001126336,NM_004385,NM_001164097,NM_001884,NM_001164098	chr5,chr5,chr5,chr5,chr5	+,+,+,-,+	VCAN,VCAN,VCAN,HAPLN1,VCAN	-2811,-2811,-2811,246491,-2811
chr10:50817374-50817682	chr10	+	50817434	50817638	True	NM_000124,NM_020984,NM_001142934,NM_001142933,NM_001142929,NM_020549,NM_003055,NM_020985,NM_020986	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,+,+,+,+,+,+,+,+	ERCC6,CHAT,CHAT,CHAT,CHAT,CHAT,SLC18A3,CHAT,CHAT	-70287,-344,4444,4444,4444,4444,708,3515,3515
chr2:158487134-158488316	chr2	+	158487487	158488265	True	NM_001111033,NM_001111032,NM_001135098,NM_145259	chr2,chr2,chr2,chr2	-,-,+,-	ACVR1C,ACVR1C,UPP2,ACVR1C	-2088,-2088,363425,-2088
chr3:97166986-97168048	chr3	+	97167065	97168063	True	NM_001042533,NM_173655	chr3,chr3	-,+	MINA,EPHA6	523211,-8627
chr15:78551481-78552559	chr15	+	78551616	78552486	True	NM_001130182,NM_001130183,NM_015162,NM_018602	chr15,chr15,chr15,chr15	+,+,-,+	DNAJA4,DNAJA4,ACSBG1,DNAJA4	4502,6073,-24567,4000
chr2:161061199-161061684	chr2	+	161061205	161061683	True	NM_000888,NM_022826	chr2,chr2	-,+	ITGB6,MARCH7	-4615,-492246
chr19:35595095-35595497	chr19	+	35595199	35595529	True	NM_001136009,NR_024562,NR_024561	chr19,chr19,chr19	+,-,-	FXYD3,LOC100128675,LOC100128675	11202,1729,1696
chr12:133403945-133404792	chr12	+	133404047	133404741	True	NM_001172557,NM_005895,NM_001170544	chr12,chr12,chr12	-,-,+	GOLGA3,GOLGA3,PGAM5	735,597,-116712
chr5:740627-741271	chr5	+	740835	741229	True	NM_018140,NM_007030	chr5,chr5	+,-	CEP72,TPPP	-128483,-47325
chr5:740627-741271	chr5	+	833012	833408	False	NM_001166260,NM_024786	chr5,chr5	+,-	TRIP13,ZDHHC11	59560,17743
chr2:1748442-1748657	chr2	+	1748558	1748680	True	NM_012293,NM_175722	chr2,chr2	-,+	PXDN,TPO	-267,-330429
chr1:149888335-149888590	chr1	+	149888393	149888489	True	NM_014849,NM_016074	chr1,chr1	-,+	SV2A,BOLA1	995,-17289
chr11:6239042-6239330	chr11	+	6239109	6239179	True	NM_173525,NM_001098794	chr11,chr11	+,-	C11orf42,FAM160A2	-12362,16812
chrX:1387819-1388204	chrY	+	1337858	1338229	False	NM_172249,NM_001161529,NM_006140,NM_001161532,NM_022148,NM_172246,NM_172245,NR_027760,NM_001161531	chrY,chrY,chrY,chrY,chrY,chrY,chrY,chrY,chrY	+,+,+,+,-,+,+,+,+	CSF2RA,CSF2RA,CSF2RA,CSF2RA,CRLF2,CSF2RA,CSF2RA,CSF2RA,CSF2RA	-216,-216,-216,-216,-56328,-216,-216,-216,-216
chrX:1387819-1388204	chrX	+	1387858	1388229	True	NM_172249,NM_001161529,NM_006140,NM_001161532,NM_022148,NM_172246,NM_172245,NR_027760,NM_001161531	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,-,+,+,+,+	CSF2RA,CSF2RA,CSF2RA,CSF2RA,CRLF2,CSF2RA,CSF2RA,CSF2RA,CSF2RA	-216,-216,-216,-216,-56328,-216,-216,-216,-216
chr2:61405389-61406568	chr2	+	61405635	61406527	True	NM_152392,NR_036496	chr2,chr2	+,-	AHSA2,LOC339803	-1131,-33525
chr6:144284591-144286347	chr6	+	144284633	144286342	True	NM_001013623,NM_001080952	chr6,chr6	+,-	C6orf94,PLAGL1	-99117,43250
chr19:48494516-48494810	chr19	+	48494518	48494578	True	NM_022142,NM_001128326	chr19,chr19	+,-	ELSPBP1,BSPH1	3329,899
chr17:30228326-30228603	chr17	+	30228334	30228640	True	NM_015355,NM_018428	chr17,chr17	+,-	SUZ12,UTP6	35403,139
chr15:45491225-45491556	chr15	+	45491274	45491600	True	NM_138356,NM_004212	chr15,chr15	-,+	SHF,SLC28A2	1823,52827
chr20:42838606-42838852	chr20	+	42838634	42838786	True	NM_024034,NM_016470	chr20,chr20	+,-	GDAP1L1,C20orf111	37121,695
chr16:691430-691712	chr16	+	691481	691743	True	NM_001040165,NM_001040160,NM_032366,NM_001040162,NM_138418,NM_145294,NM_001040161	chr16,chr16,chr16,chr16,chr16,chr16,chr16	-,-,-,-,+,+,-	C16orf13,C16orf13,C16orf13,C16orf13,FAM195A,WDR90,C16orf13	-5134,-5134,-5134,-5134,105,7619,-5134
chr14:58664797-58666632	chr14	+	58665212	58666470	True	NM_018477,NM_001001872	chr14,chr14	+,-	ACTR10,C14orf37	362,-46365
chr9:103190856-103192549	chr9	+	103191097	103192326	True	NM_080655,NM_001198805,NM_017746,NM_001198807,NM_001198806	chr9,chr9,chr9,chr9,chr9	+,+,-,+,+	C9orf30,C9orf30,TEX10,C9orf30,C9orf30	-1661,-1445,-75838,-1661,117
chr4:20255059-20255344	chr4	+	20255094	20255338	True	NM_147181,NM_004787	chr4,chr4	-,+	KCNIP4,SLIT2	597003,10
chr16:30041601-30041807	chr16	+	30041645	30041767	True	NM_031478,NM_001109660,NM_001109659	chr16,chr16,chr16	-,+,+	FAM57B,C16orf92,C16orf92	469,-7041,-7041
chr12:10155334-10156369	chr12	+	10155518	10156236	True	NM_016509,NM_001099431,NM_001129998,NM_205852	chr12,chr12,chr12,chr12	-,-,+,+	CLEC1B,CLEC1B,CLEC12B,CLEC12B	-3619,-3619,6994,6994
chr1:64936741-64937136	chr1	+	64936885	64937131	True	NM_002227,NM_020925	chr1,chr1	-,+	JAK1,CACHD1	495106,-460
chr9:37904664-37905009	chr9	+	37904670	37904954	True	NM_024345,NM_033412,NR_024873,NR_024872	chr9,chr9,chr9,chr9	+,-,-,-	DCAF10,MCART1,MCART1,MCART1	-103931,-320,-320,-320
chr3:47021707-47022654	chr3	+	47021940	47022622	True	NM_144716,NM_015175	chr3,chr3	-,+	CCDC12,NBEAL2	-3670,-818
chr1:903584-904247	chr1	+	903769	904157	True	NM_015658,NM_198317,NM_001160184,NM_032129	chr1,chr1,chr1,chr1	-,+,+,+	NOC2L,KLHL17,PLEKHN1,PLEKHN1	-9090,-7853,-1943,-1943
chr15:67813130-67813413	chr15	+	67813200	67813368	True	NM_001143936,NM_024666	chr15,chr15	+,-	C15orf61,AAGAB	153,-266126
chr4:80333225-80335223	chr4	+	80333509	80335232	True	NM_033214,NR_026555	chr4,chr4	-,+	GK2,GDEP	-4137,413392
chr8:95654727-95654949	chr8	+	95654735	95654919	True	NM_017697,NR_034034,NM_001122827,NM_001122825,NM_001034915,NM_001122826	chr8,chr8,chr8,chr8,chr8,chr8	+,-,+,+,+,+	ESRP1,LOC100288748,ESRP1,ESRP1,ESRP1,ESRP1	-1422,-3040,-1422,-1422,-1422,-1422
chr17:6460277-6460626	chr17	+	6460419	6460625	True	NM_001165966,NM_031220,NM_032731	chr17,chr17,chr17	-,-,+	PITPNM3,PITPNM3,TXNDC17	-542,-542,83596
chr12:55003928-55004386	chr12	+	55003953	55004391	True	NM_001165975,NR_003039	chr12,chr12	+,-	PDE1B,GLYCAM1	-48905,77
chr6:33751722-33752068	chr6	+	33751741	33752105	True	NM_001143944,NM_002224,NM_181336	chr6,chr6,chr6	-,+,-	LEMD2,ITPR3,LEMD2	2664,-162636,4851
chr15:31926834-31928118	chr15	+	31927019	31928009	True	NM_015995,NM_130901	chr15,chr15	+,-	KLF13,OTUD7A	-307987,19585
chr12:12847438-12848422	chr12	+	12847457	12848461	True	NM_004064,NM_006143	chr12,chr12	+,-	CDKN1B,GPR19	21840,710
chr20:749076-750445	chr20	+	749082	750242	True	NM_033409,NM_001042353	chr20,chr20	-,+	C20orf54,FAM110A	-16,64113
chr11:18548727-18550028	chr11	+	18548736	18549802	True	NM_144972,NM_006292	chr11,chr11	+,-	LDHAL6A,TSG101	-71413,-247
chr3:9459783-9460409	chr3	+	9459951	9460260	True	NR_027007,NM_001080517	chr3,chr3	-,+	LOC440944,SETD5	-20777,-20600
chr7:130079686-130080020	chr7	+	130079734	130079863	True	NM_177524,NM_018718	chr7,chr7	+,-	MEST,TSGA14	46182,1050
chr22:46441036-46441374	chr22	+	46441057	46441193	True	NM_018280,NR_027034,NR_027036	chr22,chr22,chr22	-,+,-	C22orf26,LOC150381,LOC100271722	8881,8532,-309
chr1:153941155-153942037	chr1	+	153941274	153941980	True	NM_130898,NM_014437,NM_006694	chr1,chr1,chr1	+,-,-	CREB3L4,SLC39A1,JTB	-934,-1086,8523
chr14:92792748-92793588	chr14	+	92792792	92793480	True	NM_153648,NM_004545,NM_153646,NM_153647	chr14,chr14,chr14,chr14	+,-,+,+	SLC24A4,NDUFB1,SLC24A4,SLC24A4	-3918,-204639,-2691,-3306
chr9:129375767-129376000	chr9	+	129375778	129375894	True	NM_001174146,NM_001174147,NM_002316,NM_012098	chr9,chr9,chr9,chr9	+,+,+,-	LMX1B,LMX1B,LMX1B,ANGPTL2	827,827,827,509206
chr11:47198979-47199412	chr11	+	47199092	47199330	True	NM_032389,NM_000107,NM_001184974,NM_001184975,NM_016223	chr11,chr11,chr11,chr11,chr11	-,+,-,-,-	ARFGAP2,DDB2,PACSIN3,PACSIN3,PACSIN3	-673,37162,8730,8152,8730
chr20:62490315-62490670	chr20	+	62490416	62490684	True	NM_080622,NM_025224,NM_199359,NM_003288,NM_199363,NM_199362,NM_199361,NM_199360	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,-,+,+,+,+,+,+	ABHD16B,ZBTB46,TPD52L2,TPD52L2,TPD52L2,TPD52L2,TPD52L2,TPD52L2	1881,-53560,5905,5905,5905,5905,5905,5905
chr10:46627387-46628248	chr10	+	46627388	46628048	True	NR_027632,NM_001042357,NM_001042389	chr10,chr10,chr10	+,-,-	FAM35B,PTPN20B,PTPN20A	269592,-7330,-7330
chr10:46627387-46628248	chr10	+	48814321	48814980	False	NM_001042357,NM_153034,NM_001042389	chr10,chr10,chr10	-,+,-	PTPN20B,ZNF488,PTPN20A	-7336,-459290,-7336
chr10:46627387-46628248	chr10	+	49334853	49335492	False	NR_033172,NM_002750	chr10,chr10	-,+	FRMPD2P1,MAPK8	47798,274194
chr20:3802177-3802910	chr20	+	3802324	3802865	True	NM_001204447,NM_001204446,NM_001810,NM_018347	chr20,chr20,chr20,chr20	+,+,-,+	C20orf29,C20orf29,CENPB,C20orf29	-1204,-1204,-34987,-1204
chr3:3221605-3222700	chr3	+	3221614	3222660	True	NM_001173482,NM_016302,NM_182916	chr3,chr3,chr3	-,-,+	CRBN,CRBN,TRNT1	-213,-213,-53065
chr6:143780417-143781855	chr6	+	143780684	143781592	True	NM_182503,NM_003630	chr6,chr6	-,+	ADAT2,PEX3	-8843,-8817
chr15:94575866-94577090	chr15	+	94576174	94576934	True	NM_001159643,NM_020211	chr15,chr15	+,-	MCTP2,RGMA	264495,-943731
chr21:44521265-44522014	chr21	+	44521280	44522036	True	NM_006758,NM_001025203,NM_001025204,NM_000394	chr21,chr21,chr21,chr21	-,-,-,+	U2AF1,U2AF1,U2AF1,CRYAA	5702,5702,5702,67104
chrX:40138255-40139148	chrX	+	40138341	40139192	True	NM_001123384,NM_005765	chrX,chrX	-,+	BCOR,ATP6AP2	-101759,301023
chr19:51227300-51227544	chr19	+	51227373	51227453	True	NM_016148,NM_002975	chr19,chr19	-,+	SHANK1,CLEC11A	-7178,-819
chr4:106509287-106510128	chr4	+	106509356	106510165	True	NM_176869,NM_017700	chr4,chr4	-,+	PPA2,ARHGEF38	-114129,-35632
chr10:74868147-74868782	chr10	+	74868154	74868586	True	NM_001142596,NM_015901	chr10,chr10	-,+	P4HA1,NUDT13	-11422,1623
chr19:50378909-50379460	chr19	+	50378909	50379245	True	NM_032375,NM_007254,NM_024682,NM_001168222,NM_001098633,NM_001098632	chr19,chr19,chr19,chr19,chr19,chr19	-,-,+,+,-,-	AKT1S1,PNKP,TBC1D17,TBC1D17,AKT1S1,AKT1S1	1383,-8087,1436,1436,1417,1449
chr8:87679524-87681013	chr8	+	87679617	87681048	True	NM_019098,NM_003909	chr8,chr8	-,+	CNGB3,CPNE3	74905,-153012
chr18:28680866-28681193	chr18	+	28681091	28681215	True	NM_001942,NM_004949,NM_024422	chr18,chr18,chr18	+,-,-	DSG1,DSC2,DSC2	216836,1223,1223
chr10:126427841-126429411	chr10	+	126427994	126429317	True	NM_032182,NM_014661	chr10,chr10	+,-	FAM175B,FAM53B	61036,3670
chr3:50702249-50702606	chr3	+	50702441	50702633	True	NM_145071,NM_004947	chr3,chr3	-,+	CISH,DOCK3	-53179,10038
chr3:118715537-118716402	chr3	+	118715744	118716304	True	NM_152539,NM_001015887	chr3,chr3	+,-	C3orf30,IGSF11	148692,37422
chr1:59783759-59784526	chr1	+	59783764	59784516	True	NR_027120,NM_018291	chr1,chr1	-,+	LOC729467,FGGY	-171285,-21201
chr14:75901394-75901699	chr14	+	75901491	75901694	True	NM_130469,NM_001135049,NM_001135048,NM_007176,NM_001135047	chr14,chr14,chr14,chr14,chr14	+,+,+,-,+	JDP2,JDP2,JDP2,C14orf1,JDP2	-6489,-2712,-6629,225895,-7040
chr16:49315039-49315321	chr16	+	49315099	49315175	True	NM_144602,NM_004352	chr16,chr16	+,-	C16orf78,CBLN1	92632,617
chr8:120078244-120079947	chr8	+	120078418	120079635	True	NM_002546,NM_006438	chr8,chr8	-,+	TNFRSF11B,COLEC10	-114035,-212
chr5:140615191-140615740	chr5	+	140615195	140615365	True	NM_018935,NR_001282,NR_001281,NM_031947	chr5,chr5,chr5,chr5	+,+,+,-	PCDHB15,PCDHB19P,PCDHB18,SLC25A2	9781,4323,-1308,68297
chr8:41654616-41655057	chr8	+	41654630	41655070	True	NM_000037,NM_178819,NM_020475,NM_020476,NM_020477	chr8,chr8,chr8,chr8,chr8	-,+,-,-,-	ANK1,AGPAT6,ANK1,ANK1,ANK1	120,-218974,120,120,120
chr3:38073312-38075297	chr3	+	38073587	38075334	True	NM_006225,NR_024071,NM_001130964,NM_007335,NM_007337	chr3,chr3,chr3,chr3,chr3	-,-,-,+,+	PLCD1,PLCD1,PLCD1,DLEC1,DLEC1	-2433,-7309,-7309,5361,5361
chr13:27149132-27149587	chr13	+	27149318	27149612	True	NM_005288,NM_006646	chr13,chr13	-,+	GPR12,WASF3	185360,-17541
chr2:60909019-60910584	chr2	+	60909446	60910554	True	NM_022893,NM_022894	chr2,chr2	-,+	BCL11A,PAPOLG	-128813,72810
chr6:27115896-27117114	chr6	+	27116021	27117011	True	NM_080596,NM_003495,NM_080593,NR_036096	chr6,chr6,chr6,chr6	+,+,-,+	HIST1H2AH,HIST1H4I,HIST1H2BK,MIR3143	-1165,-8985,-1384,-668
chr10:27794579-27795544	chr10	+	27794765	27795264	True	NM_021252,NM_001034842	chr10,chr10	+,-	RAB18,PTCHD3	-1569,-91468
chr19:47215517-47215971	chr19	+	47215873	47216009	True	NM_001079882,NM_001039885,NM_001079880,NM_001079881,NM_016457,NR_036157	chr19,chr19,chr19,chr19,chr19,chr19	-,+,-,-,-,-	PRKD2,FKRP,PRKD2,PRKD2,PRKD2,MIR320E	1618,33293,4425,4425,4425,-3271
chr9:97403561-97403929	chr9	+	97403573	97403945	True	NM_000507,NM_001193331,NM_001127628	chr9,chr9,chr9	-,+,-	FBP1,C9orf3,FBP1	-1650,85005,-1042
chr3:49168202-49168769	chr3	+	49168221	49168713	True	NM_001199161,NM_001199160,NM_001199162,NM_173546,NM_006677,NM_002292	chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,+,-,-	USP19,USP19,USP19,KLHDC8B,USP19,LAMB2	-9850,-9850,-9850,40304,-9850,1936
chr15:59937272-59937954	chr15	+	59937310	59937960	True	NM_004751,NM_004492	chr15,chr15	+,-	GCNT3,GTF2A2	-33379,11829
chr19:8429224-8429489	chr19	+	8429260	8429414	True	NM_139314,NM_001039667,NM_198471	chr19,chr19,chr19	+,+,-	ANGPTL4,ANGPTL4,KANK3	-300,-300,-21114
chr8:145554450-145555166	chr8	+	145554486	145555076	True	NM_024531,NM_012079,NM_031309	chr8,chr8,chr8	+,-,-	GPR172A,DGAT1,SCRT1	27148,-3919,4917
chr4:38664231-38664883	chr4	+	38664241	38664741	True	NM_016531,NR_026804	chr4,chr4	+,-	KLF3,FLJ13197	1048,1558
chrX:152712912-152714301	chrX	+	152713110	152714104	True	NM_080701,NM_001136273	chrX,chrX	-,+	TREX2,ZFP92	-1165,-29380
chr7:150104408-150104718	chr7	+	150104439	150104718	True	NR_027237,NM_002889	chr7,chr7	+,-	LOC728743,RARRES2	-1650,-65676
chr13:30016089-30017344	chr13	+	30016328	30017366	True	NM_015233,NM_003045	chr13,chr13	+,-	MTUS2,SLC7A1	-13609,152509
chr5:70220118-70220831	chr5	+	70220281	70220830	True	NM_022876,NM_022877,NM_022874,NM_022875,NM_000344,NM_017411,NM_004536	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,-	SMN2,SMN2,SMN1,SMN2,SMN1,SMN2,NAIP	-36,-36,-36,-36,-36,-36,100161
chr5:70220118-70220831	chr5	+	69345334	69345412	False	NM_022876,NM_022877,NM_022874,NM_022875,NM_000344,NM_017411,NR_024054	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,-	SMN2,SMN2,SMN1,SMN2,SMN1,SMN2,LOC100170939	-36,-36,-36,-36,-36,-36,176260
chr19:19627498-19627889	chr19	+	19627498	19627933	True	NM_032037,NM_015965	chr19,chr19	-,+	TSSK6,NDUFA13	-1029,-530
chrX:19791966-19792509	chrX	+	19791999	19792498	True	NM_001173456,NM_001024666	chrX,chrX	+,-	PDHA1,SH3KBP1	-430040,25479
chr10:135444435-135445150	chr10	+	135444526	135445158	True	NM_001127386	chr10	+	DUX4L2	35209
chr10:135444435-135445150	chr4	+	190952720	190953095	False	NM_012147,NM_001005217	chr4,chr4	+,-	DUX2,FRG2	35771,-4308
chr11:44887611-44888187	chr11	+	44887765	44888187	True	NM_130783,NM_001076787	chr11,chr11	+,-	TSPAN18,TP53I11	-101840,84471
chr9:35488541-35489511	chr9	+	35488595	35488849	True	NM_014806,NM_001099951	chr9,chr9	+,-	RUSC2,FAM166B	1157,75097
chr7:100182083-100182389	chr7	+	100182097	100182420	True	NM_033506,NM_002319,NM_001163499,NM_012172	chr7,chr7,chr7,chr7	+,-,+,+	FBXO24,LRCH4,FBXO24,FBXO24	1535,1406,4775,4775
chrX:153772803-153773769	chrX	+	153773029	153773733	True	NM_003639,NM_001099856,NM_001099857,NM_001042351,NM_000402,NM_001145255	chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,-,-,+	IKBKG,IKBKG,IKBKG,G6PD,G6PD,IKBKG	2328,-2621,1828,2104,1550,1828
chr1:187139927-187141285	chr1	+	187140355	187141242	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-490796,-342374
chr3:184528111-184529978	chr3	+	184528267	184529793	True	NM_001009921,NM_022149,NM_015303	chr3,chr3,chr3	+,-,+	VPS8,MAGEF1,VPS8	137,-98431,137
chr17:60553916-60554305	chr17	+	60553976	60554060	True	NR_027486,NM_001112707,NM_006852	chr17,chr17,chr17	-,+,+	TBC1D3P2,TLK2,TLK2	-200960,2325,2325
chr22:26564481-26564766	chr22	+	26564572	26564720	True	NM_021115,NM_001184773,NM_001184776,NM_001184777,NM_001184774,NM_001184775,NM_152841	chr22,chr22,chr22,chr22,chr22,chr22,chr22	+,+,+,+,+,+,-	SEZ6L,SEZ6L,SEZ6L,SEZ6L,SEZ6L,SEZ6L,HPS4	719,719,719,719,719,719,310881
chr5:156392575-156393716	chr5	+	156392789	156393626	True	NM_138379,NM_001146726,NR_028472	chr5,chr5,chr5	-,-,+	TIMD4,TIMD4,LOC100286948	-2523,-2523,-41744
chr2:27889248-27891106	chr2	+	27889345	27890905	True	NM_014860,NM_018158	chr2,chr2	-,+	SUPT7L,SLC4A1AP	-2896,-3066
chr19:54984215-54985744	chr19	+	54984338	54985472	True	NM_198988,NM_052925,NM_145057	chr19,chr19,chr19	-,+,-	LENG9,LENG8,CDC42EP5	-9444,-24325,84
chr19:2740249-2740879	chr19	+	2740421	2740608	True	NM_003249,NM_213568,NM_144564	chr19,chr19,chr19	+,-,-	THOP1,SLC39A3,SLC39A3	44897,-347,-347
chr19:19371319-19371609	chr19	+	19371399	19371657	True	NM_023002,NM_004386	chr19,chr19	-,+	HAPLN4,NCAN	1989,-48668
chr6:15005419-15006240	chr6	+	15005502	15006129	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	240397,657217
chr12:48552004-48552453	chr12	+	48552045	48552227	True	NM_024095,NM_001013635	chr12,chr12	-,+	ASB8,C12orf68	-668,25138
chr9:137773418-137774427	chr9	+	137773439	137774331	True	NR_037460,NM_015837,NM_004108	chr9,chr9,chr9	-,+,+	MIR3689A,FCN2,FCN2	-30949,-832,-832
chr4:89513139-89513413	chr4	+	89513175	89513393	True	NM_032906,NM_014606	chr4,chr4	-,+	PIGY,HERC3	-68220,253
chr22:35654210-35654730	chr22	+	35654267	35654711	True	NM_001003681,NR_027780,NM_005368	chr22,chr22,chr22	+,+,-	HMGXB4,HMGXB4,MB	-880,-880,358731
chr8:103875959-103876457	chr8	+	103876023	103876427	True	NM_015878,NM_148174,NM_001695	chr8,chr8,chr8	-,-,+	AZIN1,AZIN1,ATP6V1C1	20,20,156820
chr4:185397139-185397661	chr4	+	185397572	185397691	True	NM_002199,NM_152683	chr4,chr4	-,+	IRF2,CCDC111	-1846,173075
chr20:21114564-21115018	chr20	+	21114598	21114952	True	NM_033176,NM_001163023,NM_001163022,NM_018474	chr20,chr20,chr20,chr20	-,+,+,+	NKX2-4,PLK1S1,PLK1S1,PLK1S1	263145,-8026,-8026,-8026
chr18:13619694-13620186	chr18	+	13619746	13620108	True	NM_001003675,NM_001003674,NM_001098801,NM_181483,NM_004338	chr18,chr18,chr18,chr18,chr18	+,+,-,+,+	C18orf1,C18orf1,C18orf19,C18orf1,C18orf1	-8132,-8132,106533,758,758
chr11:65818362-65819190	chr11	+	65818463	65819136	True	NM_033036,NM_006842	chr11,chr11	-,+	GAL3ST3,SF3B2	-1812,679
chr18:8727487-8729179	chr18	+	8727606	8728636	True	NM_015210,NR_024419	chr18,chr18	+,-	KIAA0802,LOC100192426	-10295,-360574
chr14:77577434-77578330	chr14	+	77577600	77578379	True	NM_174976,NM_033426	chr14,chr14	-,+	ZDHHC22,KIAA1737	29812,-13073
chr12:96142340-96143371	chr12	+	96142563	96142647	True	NM_003095,NM_021229	chr12,chr12	+,-	SNRPF,NTN4	110061,41947
chr11:47199995-47200454	chr11	+	47200155	47200347	True	NM_032389,NM_000107,NM_001184974,NM_001184975,NM_016223	chr11,chr11,chr11,chr11,chr11	-,+,-,-,-	ARFGAP2,DDB2,PACSIN3,PACSIN3,PACSIN3	-1736,36145,7713,7135,7713
chr14:68097664-68099628	chr14	+	68097794	68099423	True	NM_001172,NM_004569	chr14,chr14	+,-	ARG2,PIGH	-11266,-30777
chr3:50316923-50317352	chr3	+	50316964	50317308	True	NM_006764,NM_153215	chr3,chr3	-,+	IFRD2,C3orf45	12768,-497
chrX:30233614-30233866	chrX	+	30233649	30233907	True	NM_000475,NM_002364	chrX,chrX	-,+	NR0B1,MAGEB2	93638,-25
chr3:182879113-182879337	chr3	+	182879112	182879180	True	NM_032047,NM_014398	chr3,chr3	+,-	B3GNT5,LAMP3	91851,1545
chr21:43189141-43189378	chr21	+	43189152	43189402	True	NR_024028,NM_020639	chr21,chr21	+,-	NCRNA00112,RIPK4	-52609,-1903
chr9:140175025-140175289	chr9	+	140175027	140175337	True	NM_017723,NM_001004354	chr9,chr9	+,-	C9orf167,NRARP	-2798,21416
chr12:56757385-56758735	chr12	+	56757532	56758588	True	NM_198332,NM_005419,NM_016584,NM_001638	chr12,chr12,chr12,chr12	-,-,+,-	STAT2,STAT2,IL23A,APOF	-3495,-3495,-24920,-949
chr9:19201185-19202606	chr9	+	19201351	19202488	True	NR_038064,NM_017925	chr9,chr9	-,+	PLIN2,DENND4C	-73747,88260
chr4:332196-332562	chr4	+	332260	332602	True	NM_001137608,NM_003441	chr4,chr4	-,+	ZNF732,ZNF141	-42316,-715
chr4:71527879-71528477	chr4	+	71527879	71528359	True	NM_144646,NM_020368	chr4,chr4	-,+	IGJ,UTP3	4053,25836
chr2:162596143-162597740	chr2	+	162596343	162597169	True	NM_001935,NM_022058	chr2,chr2	-,+	DPP4,SLC4A10	333933,-115549
chr17:15241013-15242856	chr17	+	15241746	15242906	True	NM_031898,NR_033371	chr17,chr17	-,+	TEKT3,CDRT7	2108,-307514
chr17:60706215-60706430	chr17	+	60706335	60706401	True	NM_001100875,NM_006039	chr17,chr17	-,+	MARCH10,MRC2	177660,-1624
chr2:97760833-97761231	chr2	+	97760916	97761252	True	NM_199336,NM_001164315	chr2,chr2	-,+	FAHD2B,ANKRD36	-334,17980
chr2:97760833-97761231	chr2	-	96067927	96067977	False	NM_001164464,NM_016044	chr2,chr2	-,+	TRIM43B,FAHD2A	82552,470
chr3:49593790-49595291	chr3	+	49593891	49595342	True	NM_032316,NM_003458	chr3,chr3	-,+	NICN1,BSN	-127134,-2020
chr16:75020374-75021253	chr16	+	75020601	75020999	True	NM_030581,NM_032268	chr16,chr16	-,+	WDR59,ZNRF1	-1584,11915
chr3:129732350-129733271	chr3	+	129732638	129732946	True	NM_007117,NR_024252	chr3,chr3	+,-	TRH,LOC729375	-39576,97380
chr3:47823818-47824101	chr3	+	47823827	47824119	True	NM_014966,NM_003074	chr3,chr3	+,-	DHX30,SMARCC1	20279,-422
chr9:130186115-130186478	chr9	+	130186194	130186504	True	NM_007135,NR_002449	chr9,chr9	+,-	ZNF79,SNORA65	148,24462
chr7:100076059-100076296	chr7	+	100076142	100076224	True	NM_030935,NM_173564	chr7,chr7	-,+	TSC22D4,C7orf51	728,5325
chr5:149324761-149326080	chr5	+	149324841	149325983	True	NM_000440,NM_000112	chr5,chr5	-,+	PDE6A,SLC26A2	-485,14316
chr17:38222636-38224177	chr17	+	38222950	38223992	True	NM_199334,NM_014815,NM_001190919,NM_001190918,NM_003250	chr17,chr17,chr17,chr17,chr17	+,-,+,+,+	THRA,MED24,THRA,THRA,THRA	-3942,-12061,-4564,-3942,-3942
chr6:52619413-52620983	chr6	+	52619462	52620886	True	NM_014051,NM_000846,NR_033760	chr6,chr6,chr6	+,-,-	TMEM14A,GSTA2,GSTA7P	-83629,7525,-9505
chr1:159046449-159047117	chr1	+	159046523	159047082	True	NM_004833,NM_005531	chr1,chr1	-,+	AIM2,IFI16	-38,-66892
chr2:176959227-176961179	chr2	+	176959326	176961198	True	NM_001080458,NM_021193,NM_000523	chr2,chr2,chr2	-,+,+	EVX2,HOXD12,HOXD13	-10636,3331,-1845
chr11:123947797-123948651	chr11	+	123947980	123948621	True	NM_198315,NM_001004463	chr11,chr11	+,-	VWA5A,OR10G7	37489,-38272
chr6:42534212-42535188	chr6	+	42534411	42535171	True	NM_015255,NM_001184801,NM_033502	chr6,chr6,chr6	+,+,-	UBR2,UBR2,TRERF1	-2706,-2706,-114628
chr1:230883904-230884126	chr1	+	230883909	230884125	True	NM_016452,NM_000029,NM_006615	chr1,chr1,chr1	+,-,+	CAPN9,AGT,CAPN9	-799,-33573,-830
chr11:124733899-124734302	chr11	+	124733950	124734298	True	NM_022370,NM_019055	chr11,chr11	+,-	ROBO3,ROBO4	1006,33583
chr18:24127270-24127668	chr18	+	24127283	24127591	True	NM_001136205,NR_026908,NM_001142730	chr18,chr18,chr18	-,+,-	KCTD1,C18orf16,KCTD1	1858,317680,959
chr10:117038566-117040220	chr10	+	117038941	117040189	True	NM_207303,NM_001003408	chr10,chr10	+,-	ATRNL1,ABLIM1	-185876,-594527
chr12:69631550-69632970	chr12	+	69631661	69632912	True	NM_007007,NR_031692	chr12,chr12	+,-	CPSF6,MIR1279	404,34137
chr19:55795817-55796306	chr19	+	55795909	55796343	True	NM_012267,NM_032430,NM_001130106	chr19,chr19,chr19	-,+,-	HSPBP1,BRSK1,HSPBP1	-4158,-426,-4158
chr5:42754415-42756208	chr5	+	42754769	42756009	True	NM_001134848,NM_001085486	chr5,chr5	+,-	CCDC152,SEPP1	910,56076
chr1:173884533-173885600	chr1	+	173884847	173885587	True	NM_001122770,NM_000488	chr1,chr1	+,-	ZBTB37,SERPINC1	-47405,979
chr19:52435737-52437349	chr19	+	52435837	52436957	True	NM_024840,NM_001031721,NM_023074	chr19,chr19,chr19	+,+,-	ZNF613,ZNF613,ZNF649	-5200,-5200,-27532
chr11:57106408-57106621	chr11	+	57106538	57106670	True	NM_002559,NM_003146	chr11,chr11	+,-	P2RX3,SSRP1	-640,-3187
chr3:46393730-46394239	chr3	+	46393973	46394241	True	NM_001123396,NM_001123041,NM_001199149	chr3,chr3,chr3	+,+,-	CCR2,CCR2,LTF	993,993,110970
chr13:51729068-51730238	chr13	+	51729078	51730171	True	NR_003923,NM_145019	chr13,chr13	-,+	GUCY1B2,FAM124A	-88785,66335
chr6:2901423-2902469	chr6	+	2901531	2902309	True	NR_026855,NM_004155	chr6,chr6	+,-	DKFZP686I15217,SERPINB9	85891,1286
chr3:97745091-97745403	chr3	+	97745106	97745402	True	NM_001105580,NM_054106	chr3,chr3	-,+	GABRR3,OR5AC2	8479,60614
chr3:179322193-179322398	chr3	+	179322220	179322434	True	NM_001199958,NM_002492,NM_177988,NM_020409,NM_001199957	chr3,chr3,chr3,chr3,chr3	+,+,-,-,+	NDUFB5,NDUFB5,MRPL47,MRPL47,NDUFB5	140,140,50,50,140
chr1:196619704-196621001	chr1	+	196619910	196621036	True	NM_001014975,NM_000186,NM_198503	chr1,chr1,chr1	+,+,-	CFH,CFH,KCNT2	-29,-29,-42411
chr10:112677920-112678335	chr10	+	112677919	112678343	True	NM_007373,NM_001195305,NM_001195304,NM_001195307,NM_001195306,NR_024141	chr10,chr10,chr10,chr10,chr10,chr10	+,-,-,-,-,-	SHOC2,BBIP1,BBIP1,BBIP1,BBIP1,BBIP1	957,831,831,831,401,831
chr5:130500787-130501002	chr5	+	130500790	130500866	True	NM_181705,NR_024611,NR_024610,NM_005340	chr5,chr5,chr5,chr5	+,-,-,-	LYRM7,HINT1,HINT1,HINT1	5774,210,218,218
chr16:31766687-31766901	chr16	+	31766871	31766942	True	NR_027011,NM_001130913	chr16,chr16	-,+	CSDAP1,ZNF720	-186026,-42379
chr12:51841796-51842422	chr12	+	51841916	51842228	True	NM_001039960,NM_007210	chr12,chr12	+,-	SLC4A8,GALNT6	-23374,-56716
chr2:3604466-3605562	chr2	+	3604626	3605534	True	NM_001011,NM_002936	chr2,chr2	+,-	RPS7,RNASEH1	17318,456
chr15:25472504-25473427	chr15	+	25472676	25473434	True	NR_003352,NR_003358,NR_003496,NR_003497,NR_003351,NR_003344,NR_003345,NR_003346,NR_003347,NM_130838,NR_003343,NR_003303,NR_003348,NR_003349,NR_003350	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,-,+,+,+,+,+	SNORD115-37,SNORD115-43,HBII-52-27,HBII-52-28,SNORD115-36,SNORD115-29,SNORD115-30,SNORD115-31,SNORD115-32,UBE3A,SNORD115-26,SNORD115-11,SNORD115-33,SNORD115-34,SNORD115-35	9698,-4334,-7077,-5226,-4334,-4334,-2377,-471,679,177269,-8963,-4334,2550,4099,5959
chr4:106816892-106817123	chr4	+	106816903	106817043	True	NM_020395,NM_001184691,NM_001184690,NM_001184693,NM_001184692,NM_001033047	chr4,chr4,chr4,chr4,chr4,chr4	-,+,+,+,+,+	INTS12,NPNT,NPNT,NPNT,NPNT,NPNT	-187022,-357,-357,-357,-357,-357
chr15:42306045-42307505	chr15	+	42306494	42307522	True	NM_001080490,NM_001114633	chr15,chr15	-,+	PLA2G4E,PLA2G4B	-4049,-175547
chr9:128022264-128023418	chr9	+	128022280	128023415	True	NM_005347,NM_015635	chr9,chr9	-,+	HSPA5,GAPVD1	-18614,695
chr11:46382258-46382723	chr11	+	46382345	46382693	True	NM_000741,NM_001105540	chr11,chr11	-,+	CHRM4,DGKZ	25470,451
chr16:50583738-50584172	chr16	+	50583756	50584188	True	NM_001144972,NM_033119	chr16,chr16	-,+	SNX20,NKD1	131126,-1566
chr19:58843398-58845132	chr19	+	58843565	58844856	True	NM_181846,NM_130786	chr19,chr19	+,-	ZSCAN22,A1BG	-5239,20072
chr8:7702422-7703616	chr8	+	7702635	7703584	True	NM_080389,NM_001040702,NM_001081552,NM_152250,NM_058203	chr8,chr8,chr8,chr8,chr8	+,+,+,-,+	DEFB104A,DEFB104B,SPAG11A,DEFB105A,SPAG11B	-8695,-8695,1817,-21275,1817
chr8:7702422-7703616	chr8	-	7323009	7323958	False	NM_080389,NM_001040702,NM_001040703,NM_016512,NM_058200,NM_058201,NM_058202,NM_058203	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,+,-,-,-,-,-	DEFB104A,DEFB104B,DEFB105B,SPAG11B,SPAG11B,SPAG11B,SPAG11B,SPAG11B	8698,8698,21284,-1817,-1817,-1817,-1817,-1817
chr1:66797376-66798103	chr1	+	66797456	66798142	True	NM_005478,NM_001037339	chr1,chr1	-,+	INSL5,PDE4B	468850,77
chr16:85043784-85044665	chr16	+	85043926	85044534	True	NM_017740,NM_001145548,NM_014732	chr16,chr16,chr16	-,-,+	ZDHHC7,ZDHHC7,KIAA0513	657,657,16875
chr19:13031259-13032435	chr19	+	13031529	13031973	True	NM_001105578,NM_004343	chr19,chr19	-,+	SYCE2,CALR	-1443,17440
chr8:145701229-145701444	chr8	+	145701309	145701493	True	NM_003923,NM_145754	chr8,chr8	-,+	FOXH1,KIFC2	275,-9622
chr7:72475421-72475787	chr7	+	72475535	72475609	True	NM_001013739,NR_003614	chr7,chr7	-,+	STAG3L3,PMS2L2	908,1070
chr7:72475421-72475787	chr7	+	74305828	74305902	False	NR_027777,NR_027776,NM_001025202,NR_027775	chr7,chr7,chr7,chr7	+,+,-,+	PMS2P5,PMS2P5,STAG3L2,PMS2P5	991,991,891,991
chr7:72475421-72475787	chr7	-	74989284	74989358	False	NR_003614,NM_001002840,NM_018991	chr7,chr7,chr7	-,+,+	PMS2L2,STAG3L1,STAG3L1	-1069,-900,-900
chr1:53699216-53700339	chr1	+	53699234	53700392	True	NM_000098,NM_002370	chr1,chr1	+,-	CPT2,MAGOH	-37191,3944
chr1:110084434-110084679	chr1	+	110084497	110084711	True	NM_006496,NM_031936,NM_020703	chr1,chr1,chr1	+,+,-	GNAI3,GPR61,AMIGO1	6474,-2054,-32161
chr1:187532642-187532965	chr1	+	187532660	187532952	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-883101,-734679
chr9:27571612-27572981	chr9	+	27572004	27572840	True	NM_018325,NM_020124,NM_145005	chr9,chr9,chr9	-,+,-	C9orf72,IFNK,C9orf72	691,-47743,1052
chr7:20370624-20370939	chr7	+	20370701	20370925	True	NM_182762,NM_002214	chr7,chr7	-,+	MACC1,ITGB8	-113688,-27
chr6:150262702-150262959	chr6	+	150262748	150262978	True	NM_025217,NM_001001788	chr6,chr6	+,-	ULBP2,RAET1G	157,-18534
chr17:9807276-9807915	chr17	+	9807575	9807941	True	NM_004246,NM_002903	chr17,chr17	+,-	GLP2R,RCVRN	-78245,793
chr2:180726446-180726659	chr2	+	180726525	180726683	True	NM_152520,NR_031659,NM_182678	chr2,chr2,chr2	-,-,+	ZNF385B,MIR1258,UBE2E3	-293,-890,1118428
chr17:21521606-21522295	chr17	+	21521605	21522209	True	NM_001113434,NM_001194958	chr17,chr17	-,+	C17orf51,KCNJ18	-66664,-213208
chr17:21521606-21522295	chr17	-	16111755	16112188	False	NM_006311,NM_004278	chr17,chr17	-,+	NCOR1,PIGL	7119,8320
chr8:63190012-63190529	chr8	+	63190044	63190577	True	NM_173688,NM_001164756	chr8,chr8	+,-	NKAIN3,ASPH	-28595,-562845
chr3:140975012-140976298	chr3	+	140975028	140976321	True	NM_001178140,NM_152282	chr3,chr3	-,+	TFDP2,ACPL2	742959,-24397
chr12:48215105-48215569	chr12	+	48215190	48215607	True	NM_015401,NM_017842,NM_001098416	chr12,chr12,chr12	-,+,-	HDAC7,SLC48A1,HDAC7	-1427,-48274,-1427
chr22:50944700-50945923	chr22	+	50944743	50945853	True	NM_014551,NM_033200,NM_001185011,NM_152299	chr22,chr22,chr22,chr22	+,-,+,+	NCAPH2,LMF2,NCAPH2,NCAPH2	791,332,791,791
chr15:37394816-37395059	chr15	+	37394898	37395082	True	NM_170674,NM_170675,NM_170676,NM_170677,NM_172315,NM_172316,NM_002399,NM_032499	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,-,-,-,-,-,+	MEIS2,MEIS2,MEIS2,MEIS2,MEIS2,MEIS2,MEIS2,C15orf41	-2194,-2194,-2194,-2194,-4395,-3301,-1398,-462152
chr10:98508581-98508909	chr10	+	98508712	98508939	True	NM_152309,NM_001170765	chr10,chr10	-,+	PIK3AP1,LCOR	-28433,83077
chr19:22192909-22193407	chr19	+	22193013	22193329	True	NM_007153,NM_033468	chr19,chr19	-,+	ZNF208,ZNF257	466,41936
chr21:46048230-46048468	chr21	+	46048413	46048475	True	NM_198698,NM_198690,NM_181688	chr21,chr21,chr21	-,+,+	KRTAP12-4,KRTAP10-9,KRTAP10-10	26151,-1424,8797
chr21:46048230-46048468	chr21	-	45970060	45970122	False	NM_198696,NM_198687,NM_198691,NM_198693	chr21,chr21,chr21,chr21	-,+,-,-	KRTAP10-3,KRTAP10-4,KRTAP10-1,KRTAP10-2	8571,23483,-9982,1316
chr2:47382485-47382901	chr2	+	47382557	47382814	True	NM_001163561,NM_002354,NM_173649	chr2,chr2,chr2	-,+,-	C2orf61,EPCAM,C2orf61	-40,213472,-40
chr3:197517649-197518018	chr3	+	197517806	197517994	True	NM_001145642,NM_032773	chr3,chr3	-,+	KIAA0226,LRCH3	-41238,150
chr14:89290310-89290681	chr14	+	89290338	89290642	True	NM_183387,NM_144596,NM_198310,NM_198309	chr14,chr14,chr14,chr14	-,+,+,+	EML5,TTC8,TTC8,TTC8	-31242,335,335,335
chr12:50236155-50236604	chr12	+	50236201	50236569	True	NM_181708,NR_027501	chr12,chr12	-,+	BCDIN3D,LOC100286844	393,-13927
chr16:29085778-29086219	chr16	+	29086131	29086201	True	NM_024816,NR_003369	chr16,chr16	-,+	RABEP2,RRN3P2	-149599,-19
chr16:29085778-29086219	chr16	-	21832645	21832715	False	NM_170664,NR_003370	chr16,chr16	+,-	OTOA,RRN3P1	-116412,-2150
chr20:34560627-34561422	chr20	+	34560627	34561273	True	NM_080834,NM_016558	chr20,chr20	+,-	C20orf152,SCAND1	-4149,-17346
chr3:181429621-181430091	chr3	+	181429639	181430041	True	NR_033725,NM_003106	chr3,chr3	-,+	DNAJC19,SOX2	-722077,22
chr10:77162741-77163322	chr10	+	77162745	77163179	True	NM_032772,NR_024422,NR_024421	chr10,chr10,chr10	-,+,+	ZNF503,NCRNA00245,NCRNA00245	-1232,334,-1510
chr2:119917635-119918047	chr2	+	119917850	119918068	True	NM_001008410,NM_182528	chr2,chr2	+,-	STEAP3,C1QL2	63315,-1379
chr2:3381216-3381482	chr2	+	3381215	3381381	True	NM_016030,NM_003310	chr2,chr2	+,-	TTC15,TSSC1	2064,322
chr1:70876666-70877029	chr1	+	70876701	70877019	True	NM_001190463,NM_153742,NM_030816,NM_001902	chr1,chr1,chr1,chr1	+,+,-,+	CTH,CTH,ANKRD13C,CTH	15,15,-56284,15
chr20:44045036-44046417	chr20	+	44045200	44046401	True	NM_014477,NM_001184729,NM_001184728,NM_001048226,NM_015937,NM_001048225,NM_001184730	chr20,chr20,chr20,chr20,chr20,chr20,chr20	-,+,+,+,+,+,+	TP53TG5,PIGT,PIGT,DBNDD2,PIGT,DBNDD2,PIGT	-38243,-544,-544,-8622,-544,-8622,-544
chr19:2152729-2153394	chr19	+	2152904	2153386	True	NM_001077523,NM_003938,NM_032482	chr19,chr19,chr19	-,-,+	AP3D1,AP3D1,DOT1L	-1348,-1348,10761
chr1:17307295-17307689	chr1	+	17307302	17307718	True	NM_014675,NM_001135248,NM_002403,NM_017459,NM_001135247	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	CROCC,MFAP2,MFAP2,MFAP2,MFAP2	-58908,-129,-129,413,413
chr12:13528164-13530036	chr12	+	13528201	13530003	True	NR_036555,NM_001423	chr12,chr12	-,+	C12orf36,EMP1	-266,-178650
chr2:9616070-9617788	chr2	+	9616158	9617713	True	NM_001039613,NM_022334	chr2,chr2	+,-	IAH1,ITGB1BP1	-1539,-52515
chr19:16184367-16185791	chr19	+	16184499	16185624	True	NM_001145160,NM_003290,NM_054113	chr19,chr19,chr19	+,+,-	TPM4,TPM4,CIB3	-6233,1510,98712
chr7:104653365-104653715	chr7	+	104653402	104653592	True	NM_182931,NR_024586,NM_018682	chr7,chr7,chr7	+,-,+	MLL5,LOC100216545,MLL5	1044,1046,1044
chr7:72973342-72974029	chr7	+	72973733	72973824	True	NM_001077621,NR_036682,NM_001707,NM_001197244	chr7,chr7,chr7,chr7	+,-,-,-	VPS37D,BCL7B,BCL7B,BCL7B	108349,-2131,-1668,-1668
chr19:41600210-41600925	chr19	+	41600282	41600906	True	NM_030589,NM_000766	chr19,chr19	-,+	CYP2A7,CYP2A13	-211625,-5965
chr4:2817872-2819347	chr4	+	2818509	2819307	True	NM_001145855,NM_001145856,NM_024309,NM_003023	chr4,chr4,chr4,chr4	+,+,-,+	SH3BP2,SH3BP2,TNIP2,SH3BP2	-4615,604,-60406,1233
chr12:10764674-10765979	chr12	+	10765013	10765949	True	NM_007334,NM_018048	chr12,chr12	+,-	KLRD1,MAGOHB	-304655,309
chr3:124930726-124931038	chr3	+	124930731	124931034	True	NM_001195483,NR_033437,NM_024628	chr3,chr3,chr3	-,+,-	SLC12A8,UMPS,SLC12A8	-488,-481569,625
chr9:113009525-113011121	chr9	+	113009671	113011100	True	NM_001136562,NM_003329	chr9,chr9	+,-	AKAP2,TXN	-121941,7735
chr9:77504079-77505940	chr9	+	77504398	77505347	True	NM_012383,NM_001177310,NM_001177311,NM_017662	chr9,chr9,chr9,chr9	+,-,-,-	OSTF1,TRPM6,TRPM6,TRPM6	198050,-1762,-2135,-1388
chr10:6128041-6128312	chr10	+	6128154	6128284	True	NM_001145547,NM_032905,NM_000417	chr10,chr10,chr10	+,+,-	RBM17,RBM17,IL2RA	3024,2664,-23821
chr17:30817131-30818510	chr17	+	30817410	30818432	True	NM_003885,NM_022344	chr17,chr17	+,-	CDK5R1,C17orf75	-3356,-148221
chr2:105654164-105654524	chr2	+	105654193	105654425	True	NR_037883,NM_182640	chr2,chr2	-,+	LOC100506421,MRPS9	-186259,57
chr10:99472425-99473108	chr10	+	99472593	99473009	True	NR_026754,NM_031484	chr10,chr10	-,+	LOC100270710,MARVELD1	4943,455
chr6:3158229-3158988	chr6	+	3158233	3159002	True	NM_001069,NR_026650	chr6,chr6	-,+	TUBB2A,BPHL	-450,-39358
chr18:21017487-21017969	chr18	+	21017505	21017825	True	NM_003831,NM_032933	chr18,chr18	+,-	RIOK3,C18orf45	14961,150
chr1:68289427-68290588	chr1	+	68289555	68290637	True	NM_001924,NM_018841	chr1,chr1	+,-	GADD45A,GNG12	-138746,8568
chr5:135849089-135851040	chr5	+	135849256	135850839	True	NM_020389,NM_001001419	chr5,chr5	-,+	TRPC7,SMAD5	-148092,-380771
chr19:44559844-44560540	chr19	+	44559942	44560338	True	NR_033341,NM_013361	chr19,chr19	-,+	LOC100379224,ZNF223	57050,-3838
chr5:75919734-75921305	chr5	+	75919791	75921141	True	NR_028375,NM_004101	chr5,chr5	+,-	NCRUPAR,F2RL2	86621,-551
chr12:53343477-53345362	chr12	+	53343687	53345207	True	NM_199187,NM_000224,NM_002273	chr12,chr12,chr12	+,+,-	KRT18,KRT18,KRT8	-1083,-895,-44819
chr8:144700138-144700605	chr8	+	144700204	144700502	True	NM_001082480,NM_003313,NM_023078	chr8,chr8,chr8	+,-,-	ZNF623,TSTA3,PYCRL	17870,-472,-8420
chr2:97001848-97003449	chr2	+	97001947	97003102	True	NM_014014,NM_015341	chr2,chr2	-,+	SNRNP200,NCAPH	-30640,-514
chr6:56818914-56819459	chr6	+	56818914	56819386	True	NM_152731,NM_183227	chr6,chr6	+,-	BEND6,RAB23	386,266921
chr5:128429331-128430077	chr5	+	128429390	128430040	True	NM_016048,NM_001999	chr5,chr5	+,-	ISOC1,FBN2	401,-555655
chr7:112126753-112127026	chr7	+	112126836	112127040	True	NM_182597,NM_014705,NM_001134468	chr7,chr7,chr7	+,-,+	C7orf53,DOCK4,C7orf53	-5822,-280374,-5980
chrX:48900967-48901591	chrX	+	48901077	48901639	True	NM_001163322,NM_006521	chrX,chrX	+,-	CCDC120,TFE3	14876,-87
chr9:90533753-90534134	chr9	+	90534056	90534182	True	NM_001145124,NM_001039803	chr9,chr9	+,-	FAM75C1,CDK20	-1230,55563
chr9:90533753-90534134	chr9	+	95646146	95646218	False	NM_001083536,NM_001007101,NM_031486	chr9,chr9,chr9	+,-,-	FGD3,ZNF484,ZNF484	63382,-5876,-5856
chr9:90533753-90534134	chr9	-	90748571	90748702	False	NM_001145124,NM_001166137	chr9,chr9	+,-	FAM75C1,FAM75C2	-215745,1248
chr2:223519637-223520426	chr2	+	223519942	223520414	True	NM_058165,NM_005687	chr2,chr2	+,-	MOGAT1,FARSB	16042,463
chr17:41173209-41173878	chr17	+	41173253	41173859	True	NM_006373,NM_005440	chr17,chr17	-,+	VAT1,RND2	650,3398
chr9:135546698-135548291	chr9	+	135546853	135548269	True	NM_022779,NM_012204,NM_138620	chr9,chr9,chr9	-,+,-	DDX31,GTF3C4,DDX31	-1065,-1176,-1065
chr12:54015495-54016008	chr12	+	54015690	54015772	True	NM_006856,NM_001130060,NM_134324	chr12,chr12,chr12	-,-,+	ATF7,ATF7,TARBP2	4485,4485,-120375
chr3:111810209-111810705	chr3	+	111810229	111810560	True	NM_001171747,NM_024616,NM_001190259	chr3,chr3,chr3	+,+,-	C3orf52,C3orf52,GCET2	-5098,-5098,41643
chr7:119547145-119547512	chr7	+	119547325	119547423	True	NM_012281,NM_012338	chr7,chr7	+,-	KCND2,TSPAN12	366298,950804
chr9:134364730-134365563	chr9	+	134365165	134365590	True	NR_003050,NR_002914,NM_001135954	chr9,chr9,chr9	+,+,-	SNORD62B,SNORD62A,UCK1	282,282,41122
chr17:46681381-46681870	chr17	+	46681558	46681855	True	NM_004502,NM_018952,NR_033205	chr17,chr17,chr17	-,-,+	HOXB7,HOXB6,LOC404266	6585,536,-8289
chr6:70591900-70593286	chr6	+	70592040	70593277	True	NM_018368,NM_001858	chr6,chr6	-,+	LMBRD1,COL19A1	-84991,-15651
chr5:179110053-179110427	chr5	+	179110052	179110481	True	NM_001024649,NM_001164444	chr5,chr5	+,-	CANX,CBY3	15448,-2077
chr1:1549253-1549697	chr1	+	1549257	1549745	True	NM_001170687,NM_080875,NM_001170689,NM_001170688,NM_001170686,NR_033183,NM_014188	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,+,-	MIB2,MIB2,MIB2,MIB2,MIB2,MIB2,SSU72	1049,1049,1499,1049,1049,1049,-38995
chr13:19983473-19984657	chr13	+	19983522	19984544	True	NR_034026,NR_027248	chr13,chr13	+,-	LOC100287114,ANKRD26P3	-64384,-64409
chr1:156711051-156711301	chr1	+	156711050	156711336	True	NM_015997,NM_024540,NM_145729	chr1,chr1,chr1	+,-,-	RRNAD1,MRPL24,MRPL24	-12838,-127,-127
chr15:82340021-82340325	chr15	+	82340085	82340326	True	NM_032246,NM_001008226	chr15,chr15	-,+	MEX3B,FAM154B	-1724,214825
chr5:139740435-139742114	chr5	+	139740657	139741958	True	NM_001945,NM_031467	chr5,chr5	-,+	HBEGF,SLC4A9	-14469,-921
chr2:34192235-34192761	chr2	+	34192291	34192807	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-453416,-239007
chr16:12148031-12149781	chr16	+	12148387	12149583	True	NM_001080530,NM_001130007	chr16,chr16	+,-	SNX29,GSPT1	-2383,-137868
chr5:135527905-135528237	chr5	+	135527958	135528232	True	NR_024418,NM_001001419	chr5,chr5	-,+	LOC389332,SMAD5	669,-59473
chr14:70077805-70078153	chr14	+	70077810	70078050	True	NR_024630,NM_014734	chr14,chr14	-,+	C14orf162,KIAA0247	-39892,259
chr16:31118604-31119603	chr16	+	31118852	31119506	True	NM_001122957,NM_032188,NM_182958,NM_206824,NM_005881	chr16,chr16,chr16,chr16,chr16	+,+,+,-,+	BCKDK,MYST1,MYST1,VKORC1,BCKDK	155,9478,9478,-12576,155
chr5:6446624-6446900	chr5	+	6446628	6446838	True	NM_001145161,NM_032286	chr5,chr5	+,-	UBE2QL1,MED10	1897,-67989
chr3:16981381-16981648	chr3	+	16981415	16981629	True	NM_015184,NM_001351,NR_037465	chr3,chr3,chr3	+,-,+	PLCL2,DAZL,MIR3714	-6884,-334409,-6778
chr3:73044546-73045407	chr3	+	73044564	73045082	True	NM_174907,NM_018130	chr3,chr3	+,-	PPP4R2,SHQ1	1036,-146966
chr4:52940368-52941905	chr4	+	52940470	52941522	True	NM_145263,NM_000232	chr4,chr4	+,-	SPATA18,SGCB	-22928,-35985
chr1:240775048-240775356	chr1	+	240775071	240775329	True	NM_022469,NM_020066	chr1,chr1	-,+	GREM2,FMN2	183,-519937
chr3:38181951-38182253	chr3	+	38181956	38182302	True	NM_001172566,NM_001172567,NR_024024,NM_001172568,NM_001172569,NM_001130410,NM_001607,NM_002468	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,-,+,+,-,-,+	MYD88,MYD88,ACAA1,MYD88,MYD88,ACAA1,ACAA1,MYD88	-2038,-2038,-3223,-2038,-2038,-3223,-3223,-2038
chr2:172777461-172778345	chr2	+	172777641	172778394	True	NR_027862,NM_003705,NM_003642	chr2,chr2,chr2	+,-,+	HAT1,SLC25A12,HAT1	540,-26828,540
chr20:61275577-61275891	chr20	+	61275648	61275890	True	NM_016354,NR_024470	chr20,chr20	+,-	SLCO4A1,LOC100127888	-1902,22133
chr8:101735115-101735547	chr8	+	101735194	101735469	True	NR_033962,NM_002568	chr8,chr8	+,-	FLJ42969,PABPC1	328812,-879
chr20:36888532-36888816	chr20	+	36888532	36888810	True	NM_001029864,NM_001725	chr20,chr20	-,+	KIAA1755,BPI	414,43741
chr9:129678674-129678915	chr9	+	129678675	129678735	True	NM_001190729,NM_001190730,NM_012098,NM_014636	chr9,chr9,chr9,chr9	+,+,-,+	RALGPS1,RALGPS1,ANGPTL2,RALGPS1	-1673,-1673,206359,-1673
chr12:46766626-46767120	chr12	+	46766835	46767159	True	NM_152641,NM_018976	chr12,chr12	+,-	ARID2,SLC38A2	-643266,-190
chr14:24601063-24601565	chr14	+	24601109	24601544	True	NM_016049,NM_203402,NM_006263,NM_176783	chr14,chr14,chr14,chr14	-,+,+,+	FAM158A,FITM1,PSME1,PSME1	9303,-485,3833,3833
chr3:115388777-115389298	chr3	+	115389262	115389332	True	NM_002045,NM_015642	chr3,chr3	+,-	GAP43,ZBTB20	-47162,-523135
chr6:136611585-136611863	chr6	+	136611634	136611904	True	NM_001077441,NM_001077440,NM_018945,NM_014739	chr6,chr6,chr6,chr6	-,-,+,-	BCLAF1,BCLAF1,PDE7B,BCLAF1	-645,-645,-438851,-645
chr3:38081465-38081692	chr3	+	38081479	38081691	True	NM_006225,NM_007335,NM_007337	chr3,chr3,chr3	-,+,+	PLCD1,DLEC1,DLEC1	-10325,-836,-836
chr2:18060567-18060788	chr2	+	18060710	18060774	True	NM_024624,NM_002252	chr2,chr2	-,+	SMC6,KCNS3	-125614,-816
chrX:114796852-114798014	chrX	+	114796988	114798054	True	NM_005032,NM_020871	chrX,chrX	+,-	PLS3,LRCH2	-1863,-328353
chr11:278910-279128	chr11	+	278926	279118	True	NM_001025295,NM_138329	chr11,chr11	-,+	IFITM5,NLRP6	20458,-407
chr19:18384527-18385407	chr19	+	18384574	18385442	True	NM_025249,NR_036155,NM_005354,NM_001145304,NM_001145305	chr19,chr19,chr19,chr19,chr19	-,+,-,-,-	KIAA1683,MIR3188,JUND,KIAA1683,KIAA1683	-67,7444,7040,-67,-67
chr15:80200793-80201798	chr15	+	80200967	80201748	True	NR_028330,NM_001100879	chr15,chr15	+,-	C15orf37,ST20	13364,5900
chr11:27697331-27697918	chr11	+	27697341	27697833	True	NM_170735,NR_033315	chr11,chr11	-,+	BDNF,BDNF-AS1	-16145,-168993
chr7:148936997-148937269	chr7	+	148937114	148937270	True	NM_012256,NM_001001661	chr7,chr7	+,-	ZNF212,ZNF425	-423,-113676
chr13:102044989-102046013	chr13	+	102045458	102045936	True	NM_052867,NM_004791	chr13,chr13	-,+	NALCN,ITGBL1	22927,59029
chr7:82071750-82072438	chr7	+	82071855	82072353	True	NM_000722,NM_001127444	chr7,chr7	-,+	CACNA2D1,CD36	728,-1796144
chr15:63797907-63798113	chr15	+	63797920	63798154	True	NR_034080,NM_006537	chr15,chr15	-,+	LOC100130855,USP3	94922,-1161
chr2:170218444-170218666	chr2	+	170218480	170218654	True	NM_152384,NM_004525	chr2,chr2	+,-	BBS5,LRP2	117351,518
chr2:115929851-115930352	chr2	+	115930002	115930397	True	NR_036580,NM_001004360	chr2,chr2	-,+	LOC389023,DPP10	-11082,-10382
chr11:67291002-67291261	chr11	+	67291233	67291297	True	NM_003977,NM_016366	chr11,chr11	+,-	AIP,CABP2	-40779,-334
chr19:57895654-57896291	chr19	+	57895758	57896116	True	NM_001172773,NM_020633,NM_152909	chr19,chr19,chr19	+,-,+	ZNF548,VN1R1,ZNF548	5101,72041,5101
chr1:217797831-217799045	chr1	+	217797861	217799001	True	NM_138796,NM_018040	chr1,chr1	+,-	SPATA17,GPATCH2	5693,5470
chr10:75491749-75492527	chr10	+	75491765	75492445	True	NR_026592,NM_004922	chr10,chr10	-,+	BMS1P4,SEC24C	-1493,11685
chr5:56778447-56778649	chr5	+	56778484	56778670	True	NM_001127236,NM_001017992	chr5,chr5	+,-	GPBP1,ACTBL2	-268634,16
chr17:8536308-8537386	chr17	+	8536359	8537099	True	NM_030808,NM_005964	chr17,chr17	+,-	NDEL1,MYH10	-197239,-2323
chr1:33281564-33282691	chr1	+	33281838	33282672	True	NM_022753,NM_001017406,NM_003680	chr1,chr1,chr1	+,+,-	S100PBP,S100PBP,YARS	503,503,1011
chrX:111326588-111326915	chrX	+	111326716	111326960	True	NM_012471,NM_001004308	chrX,chrX	-,+	TRPC5,ZCCHC16	-712,-518
chr19:18357914-18358713	chr19	+	18357932	18358708	True	NM_000923,NR_036155,NR_036575	chr19,chr19,chr19	-,+,-	PDE4C,MIR3188,LOC729966	352,34178,7571
chr6:52620983-52622685	chr6	+	52621000	52622661	True	NM_014051,NM_000846	chr6,chr6	+,-	TMEM14A,GSTA2	-85171,5759
chr14:98640030-98640475	chr14	+	98640096	98640459	True	NR_015430,NM_182560	chr14,chr14	-,+	C14orf64,C14orf177	-195635,537490
chr3:11317193-11317508	chr3	+	11317365	11317531	True	NM_006395,NM_001144912,NM_001136031,NM_001128221	chr3,chr3,chr3,chr3	+,+,+,-	ATG7,ATG7,ATG7,VGLL4	-3406,-3406,-3406,292917
chr6:18122016-18122256	chr6	+	18122111	18122291	True	NM_153042,NM_198586	chr6,chr6	+,-	KDM1B,NHLRC1	33327,610
chr22:42083187-42083976	chr22	+	42083596	42084018	True	NM_001003796,NM_001142964,NM_005008	chr22,chr22,chr22	-,+,-	NHP2L1,C22orf46,NHP2L1	945,2528,-5040
chr15:41836518-41836739	chr15	+	41836519	41836607	True	NM_015540,NM_006293	chr15,chr15	-,+	RPAP1,TYRO3	-55,14612
chr6:71996885-71998020	chr6	+	71997065	71997939	True	NM_024576,NR_029598	chr6,chr6	+,-	OGFRL1,MIR30C2	537,88845
chr16:89937416-89938125	chr16	+	89937663	89938053	True	NM_001018112,NM_014972	chr16,chr16	-,+	FANCA,TCF25	-54598,1940
chr15:26109663-26110713	chr15	+	26109724	26110694	True	NM_024490,NR_001295	chr15,chr15	-,+	ATP10A,SNORD109A	-1375,-586286
chr6:31976524-31977441	chr6_mcf_hap5	+	3356449	3356529	False	NR_001284,NM_001128590,NM_032454,NM_032470,NM_007293,NM_001002029,NM_000500,NM_004197	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	-,+,+,-,+,+,+,+	TNXA,CYP21A2,STK19,TNXB,C4A,C4B,CYP21A2,STK19	4165,-949,4832,4415,5886,5886,-949,4832
chr6:31976524-31977441	chr6_dbb_hap3	+	3262188	3262268	False	NR_001284,NM_001128590,NM_032454,NM_032470,NM_007293,NM_001002029,NM_000500,NM_004197	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	-,+,+,-,+,+,+,+	TNXA,CYP21A2,STK19,TNXB,C4A,C4B,CYP21A2,STK19	4165,-3297,4832,4415,5886,5886,-3297,4832
chr6:31976524-31977441	chr6_dbb_hap3	+	3288556	3288636	False	NM_001128590,NM_000500,NM_032470	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	+,+,-	CYP21A2,CYP21A2,TNXB	-3298,-3298,4536
chr6:31976524-31977441	chr6_ssto_hap7	+	3309315	3309395	False	NR_001284,NM_001128590,NM_032454,NM_032470,NM_007293,NM_001002029,NM_000500,NM_004197	chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7	-,+,+,-,+,+,+,+	TNXA,CYP21A2,STK19,TNXB,C4A,C4B,CYP21A2,STK19	4165,-2513,4832,4415,5886,5886,-2513,4832
chr6:31976524-31977441	chr6	+	31976605	31976685	True	NR_001284,NM_001128590,NM_032454,NM_032470,NM_007293,NM_001002029,NM_000500,NM_004197	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,+,+,-,+,+,+,+	TNXA,CYP21A2,STK19,TNXB,C4A,C4B,CYP21A2,STK19	4165,-3297,4832,4415,5886,5886,-3297,4832
chr11:119216743-119217776	chr11	+	119216829	119217491	True	NM_015645,NM_032015,NM_031433	chr11,chr11,chr11	-,+,-	C1QTNF5,RNF26,MFRP	38,-11643,38
chr21:36256891-36258362	chr21	+	36256945	36258246	True	NR_024351,NM_001001890,NM_001122607	chr21,chr21,chr21	+,-,-	NCRNA00160,RUNX1,RUNX1	-160898,2791,2791
chr9:94897060-94898051	chr9	+	94897306	94897870	True	NR_015444,NM_178324,NR_027341	chr9,chr9,chr9	+,-,+	LOC100128076,SPTLC1,C9orf44	-2241,-19616,5878
chr12:47607926-47609691	chr12	+	47607954	47609529	True	NM_138371,NR_026544	chr12,chr12	+,-	FAM113B,LOC100233209	522,747
chr3:194118921-194120829	chr3	+	194119137	194120549	True	NR_033929,NM_004488	chr3,chr3	+,-	FLJ34208,GP5	87319,6
chr20:814739-814970	chr20	+	814807	814889	True	NM_033409,NM_207121,NM_001042353	chr20,chr20,chr20	-,+,+	C20orf54,FAM110A,FAM110A	-65579,1821,-502
chr11:66511062-66511490	chr11	+	66511081	66511219	True	NM_024650,NM_006946	chr11,chr11	+,-	C11orf80,SPTBN2	987,-22211
chr1:36239793-36241268	chr1	+	36240009	36241191	True	NM_022111,NM_017629,NM_001190481	chr1,chr1,chr1	-,+,-	CLSPN,EIF2C4,CLSPN	-4458,32636,-4458
chr20:30223689-30224973	chr20	+	30223909	30224451	True	NM_032609,NM_001191	chr20,chr20	+,-	COX4I2,BCL2L1	1239,86261
chr1:179049899-179050809	chr1	+	179050016	179050846	True	NM_022371,NM_001136000	chr1,chr1	+,-	TOR3A,ABL2	265,61428
chr1:235809988-235811147	chr1	+	235810058	235810857	True	NM_003193,NM_001098722,NM_001098721,NM_004485	chr1,chr1,chr1,chr1	+,-,-,-	TBCE,GNG4,GNG4,GNG4	-279382,2486,3247,3247
chr3:64673203-64673435	chr3	+	64673206	64673484	True	NM_182920,NR_030317	chr3,chr3	-,+	ADAMTS9,MIR548A2	-69,32198
chrY:8555288-8556403	chrY	+	8555289	8555927	True	NR_001550,NR_001549	chrY,chrY	-,+	TTTY18,TTTY19	-3370,16585
chr2:241501660-241501948	chr2	+	241501855	241501915	True	NM_016552,NM_017844,NM_001033575,NM_018226	chr2,chr2,chr2,chr2	-,-,+,+	ANKMY1,ANKMY1,DUSP28,RNPEPL1	-4450,-4450,-2435,6088
chr1:109126396-109127957	chr1	+	109126396	109127942	True	NM_001010883,NM_001102592	chr1,chr1	+,-	FAM102B,HENMT1	-23476,75853
chr20:5731566-5732244	chr20	+	5731770	5731838	True	NM_019593,NM_152504	chr20,chr20	-,+	GPCPD1,C20orf196	-140098,-778
chr6:134496882-134497267	chr6	+	134496914	134497254	True	NM_004865,NM_001143678,NM_005627,NM_001143677	chr6,chr6,chr6,chr6	+,-,-,-	TBPL1,SGK1,SGK1,SGK1	-222664,-10,-880,1806
chr16:2794223-2794596	chr16	+	2794235	2794429	True	NM_016333,NR_027274,NR_027275	chr16,chr16,chr16	+,-,-	SRRM2,LOC100128788,LOC100128788	7900,419,8222
chr16:4787639-4788136	chr16	+	4787813	4788183	True	NM_133450,NM_139170	chr16,chr16	-,+	ANKS3,C16orf71	-3650,-3575
chr7:22767320-22767569	chr7	+	22767328	22767516	True	NM_000600,NM_019059	chr7,chr7	+,-	IL6,TOMM7	-613,94955
chr12:6976122-6976433	chr12	+	6976186	6976384	True	NM_032641,NM_000365,NM_001146316,NR_027483,NM_001159287	chr12,chr12,chr12,chr12,chr12	-,+,-,+,+	SPSB2,TPI1,SPSB2,TPI1,TPI1	6187,308,6115,893,199
chr17:74069668-74069946	chr17	+	74069670	74069937	True	NM_180990,NM_014230,NM_003857	chr17,chr17,chr17	+,-,+	ZACN,SRP68,GALR2	5325,-1063,954
chr16:74805391-74805939	chr16	+	74805551	74805987	True	NM_024306,NM_032268	chr16,chr16	-,+	FA2H,ZNRF1	2792,226927
chrX:153484142-153484428	chrX	+	153484319	153484463	True	NM_001586,NM_000513,NM_001048181	chrX,chrX,chrX	-,+,+	TEX28,OPN1MW,OPN1MW2	39047,739,739
chrX:153484142-153484428	chrX	+	153447199	153447344	False	NM_001586,NM_000513,NM_001048181	chrX,chrX,chrX	-,+,+	TEX28,OPN1MW,OPN1MW2	76166,740,740
chrX:153484142-153484428	chrX	+	153522125	153522270	False	NM_001205201,NM_001145933,NM_012253,NM_001586	chrX,chrX,chrX,chrX	-,+,+,-	TEX28,TKTL1,TKTL1,TEX28	1350,1756,1756,1240
chr10:124671453-124671965	chr10	+	124671461	124671945	True	NR_037911,NM_001029888	chr10,chr10	-,+	FAM24B,FAM24A	-32304,-1295
chr19:9213855-9215737	chr19	+	9213882	9215017	True	NM_001005193,NM_001004456	chr19,chr19	-,+	OR7G2,OR1M1	14,-10025
chr12:54717864-54718534	chr12	+	54718237	54718569	True	NM_016057,NM_001136023	chr12,chr12	+,-	COPZ1,NFE2	341,-23446
chr12:59718043-59718883	chr12	+	59718870	59718930	True	NM_004731,NM_153377	chr12,chr12	+,-	SLC16A7,LRIG3	364195,-404608
chr6:99797826-99798769	chr6	+	99797956	99798726	True	NM_032511,NM_001195131	chr6,chr6	-,+	C6orf168,LOC100130890	-425,170143
chr9:135548492-135550186	chr9	+	135548599	135549950	True	NM_022779,NM_012204,NM_138620	chr9,chr9,chr9	-,+,-	DDX31,GTF3C4,DDX31	-2811,-2923,-2811
chr4:9212711-9212914	chr4	+	9212756	9212946	True	NM_001105662,NM_018942	chr4,chr4	+,-	USP17,HMX1	4184,-339213
chr11:4740537-4742283	chr11	+	4740662	4742294	True	NM_030774,NM_152430	chr11,chr11	-,+	OR51E2,OR51E1	-21586,-75557
chr6:3850733-3851045	chr6	+	3850756	3851046	True	NM_183373,NM_012135	chr6,chr6	-,+	C6orf145,FAM50B	-98510,-1175
chr17:35992974-35993345	chr17	+	35992981	35993375	True	NM_007010,NM_007026	chr17,chr17	-,+	DDX52,DUSP14	10172,-143087
chr11:124500797-124501231	chr11	+	124500900	124501210	True	NM_032811,NR_016021,NM_170601	chr11,chr11,chr11	+,+,-	TBRG1,TBRG1,SIAE	-8209,-8209,42617
chr10:6320172-6321581	chr10	+	6320635	6321498	True	NM_004566,NM_000417	chr10,chr10	+,-	PFKFB3,IL2RA	-75846,-216302
chr7:123299526-123301280	chr7	+	123299608	123301309	True	NM_207163,NM_003941	chr7,chr7	+,-	LMOD2,WASL	-3798,87857
chr15:35280856-35281850	chr15	+	35280855	35281889	True	NM_014106,NR_003144	chr15,chr15	-,+	ZNF770,LOC723972	-358,247637
chr12:96336785-96337082	chr12	+	96336810	96337008	True	NM_152435,NM_182496	chr12,chr12	+,-	AMDHD1,CCDC38	62,-382
chr2:182505652-182507041	chr2	+	182505750	182507095	True	NM_001030311,NM_000885	chr2,chr2	-,+	CERKL,ITGA4	14795,-184183
chr5:126853176-126853457	chr5	+	126853354	126853464	True	NM_130809,NM_001164478	chr5,chr5	+,-	PRRC1,FLJ44606	-96,-444170
chr16:809719-810180	chr16	+	809741	810024	True	NM_005823,NM_022493,NM_001177355,NM_013404	chr16,chr16,chr16,chr16	+,-,+,+	MSLN,NARFL,MSLN,MSLN	740,-18744,741,1048
chr19:16222045-16222265	chr19	+	16222111	16222273	True	NM_005370,NM_054113	chr19,chr19	+,-	RAB8A,CIB3	216,62063
chr2:113934478-113935432	chr2	+	113934494	113935458	True	NM_012455,NM_003466	chr2,chr2	+,-	PSD4,PAX8	-2985,101090
chr1:217311697-217312020	chr1	+	217311844	217312060	True	NM_001134285,NM_138796	chr1,chr1	-,+	ESRRG,SPATA17	-747,492634
chr10:112835784-112836133	chr10	+	112835860	112836182	True	NR_026715,NM_000681	chr10,chr10	-,+	RPL13AP6,ADRA2A	-138847,607
chr9:31254605-31254889	chr9	+	31254819	31254897	True	NM_014314,NM_002197	chr9,chr9	-,+	DDX58,ACO1	1271475,1129703
chr11:106889516-106889885	chr11	+	106889609	106889885	True	NM_001130037,NM_000855	chr11,chr11	+,-	ELMOD1,GUCY1A2	571931,-438
chr19:10765658-10765942	chr19	+	10765678	10765965	True	NM_017620,NM_012218,NM_153464,NM_001137673,NR_024333,NM_004516	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,-,+	ILF3,ILF3,ILF3,ILF3,LOC147727,ILF3	-792,-792,-792,-792,-1130,-792
chr12:56120814-56121222	chr12	+	56120865	56121267	True	NM_002905,NM_001780,NM_001199771,NM_001040034	chr12,chr12,chr12,chr12	+,-,+,-	RDH5,CD63,RDH5,CD63	-6765,1693,-6765,1693
chr4:189063048-189064495	chr4	+	189063573	189064074	True	NM_173553,NM_178556	chr4,chr4	-,+	TRIML2,TRIML1	-37165,-3026
chr17:74137346-74137552	chr17	+	74137402	74137532	True	NM_180990,NM_001454	chr17,chr17	+,-	ZACN,FOXJ1	-62190,-22
chr1:46153140-46153763	chr1	+	46153178	46153802	True	NM_021639,NM_016486	chr1,chr1	-,+	GPBP1L1,TMEM69	-876,44
chr11:67059495-67059819	chr11	+	67059536	67059746	True	NM_021173,NR_030767,NM_207354	chr11,chr11,chr11	-,+,+	POLD4,ANKRD13D,ANKRD13D	61356,-2771,-2825
chrX:11139053-11139675	chrX	+	11139063	11139723	True	NM_001122608,NM_001171991,NM_005333,NM_013423	chrX,chrX,chrX,chrX	+,+,+,-	HCCS,HCCS,HCCS,ARHGAP6	-9708,-9708,-9708,144432
chr3:124639509-124640868	chr3	+	124639573	124640765	True	NM_033049,NR_033437	chr3,chr3	-,+	MUC13,UMPS	12880,-190413
chr1:169451293-169453015	chr1	+	169451957	169453046	True	NM_003666,NM_006996	chr1,chr1	+,-	BLZF1,SLC19A2	-114822,2212
chr5:138723005-138723698	chr5	+	138723227	138723581	True	NM_001033112,NM_016459,NM_005847,NM_152685,NM_001161546	chr5,chr5,chr5,chr5,chr5	+,-,-,-,-	PAIP2,MZB1,SLC23A1,SLC23A1,LOC389333	-45146,2074,-4188,-4188,7354
chr16:71882415-71883039	chr16	+	71882469	71882805	True	NM_001201553,NM_001137675,NR_024612	chr16,chr16,chr16	-,+,+	ZNF821,ATXN1L,ATXN1L	34696,-2630,-2630
chr6:75916023-75916368	chr6	+	75916068	75916344	True	NM_004370,NM_080645,NM_001100409	chr6,chr6,chr6	-,-,+	COL12A1,COL12A1,SENP6	-445,-445,395277
chr1:237207388-237208038	chr1	+	237207403	237208070	True	NM_001035,NM_018072	chr1,chr1	+,-	RYR2,HEATR1	-1758,-439562
chr19:9947175-9947920	chr19	+	9947212	9947639	True	NM_001048241,NM_024292,NM_006221,NM_017703	chr19,chr19,chr19,chr19	+,+,+,-	UBL5,UBL5,PIN1,FBXL12	-8695,-8695,-1264,-17481
chr9:132596641-132596925	chr9	+	132596641	132596939	True	NM_006676,NM_001110303,NM_001008563,NM_016520	chr9,chr9,chr9,chr9	+,+,+,-	USP20,USP20,USP20,C9orf78	756,756,817,683
chr18:10696861-10698671	chr18	+	10696974	10698676	True	NM_003826,NM_022068	chr18,chr18	+,-	NAPG,FAM38B	-171152,450135
chr12:58014156-58014553	chr12	+	58014193	58014574	True	NM_182947,NM_001478,NM_133489	chr12,chr12,chr12	+,-,+	ARHGEF25,B4GALNT1,SLC26A10	-9026,12461,-551
chr3:187462884-187463204	chr3	+	187462920	187463232	True	NR_034062,NM_001130845,NM_001706	chr3,chr3,chr3	+,-,-	LOC100131635,BCL6,BCL6	-42825,-8635,331
chr19:6739731-6739990	chr19	+	6739784	6739973	True	NM_004240,NM_001080452	chr19,chr19	+,-	TRIP10,GPR108	-128,-2151
chr12:78295683-78295992	chr12	+	78295701	78296037	True	NM_203394,NM_014903	chr12,chr12	-,+	E2F7,NAV3	-836341,-70692
chr11:30038159-30038642	chr11	+	30038234	30038509	True	NM_002233,NM_000510	chr11,chr11	-,+	KCNA4,FSHB	118,214053
chr6:5274469-5275034	chr6	+	5274523	5274898	True	NM_006567,NM_001164840	chr6,chr6	+,-	FARS2,LYRM4	-13001,-13351
chr5:58858804-58860339	chr5	+	58859037	58860207	True	NM_006203,NR_024617	chr5,chr5	-,+	PDE4D,PART1	22167,923332
chr5:72118713-72118936	chr5	+	72118820	72118972	True	NM_152625,NM_002270	chr5,chr5	-,+	ZNF366,TNPO1	-315571,-6463
chrX:134845650-134846406	chrX	+	134845818	134846246	True	NM_001017417,NM_001017436	chrX,chrX	+,-	CT45A1,CT45A4	938,90543
chrX:134845650-134846406	chrX	-	134938078	134938134	False	NM_018666,NM_001017436	chrX,chrX	+,-	SAGE1,CT45A4	37650,-1343
chrX:134845650-134846406	chrX	-	134955333	134955389	False	NM_001007551,NM_018666,NM_001172288	chrX,chrX,chrX	-,+,-	CT45A5,SAGE1,CT45A5	-1339,20395,-1339
chrX:134845650-134846406	chrX	+	134864814	134864870	False	NM_152582,NM_001017436	chrX,chrX	+,+	CT45A2,CT45A4	1343,1343
chrX:134845650-134846406	chrX	+	134882089	134882145	False	NM_001017436,NM_001017435	chrX,chrX	-,+	CT45A4,CT45A3	54646,1342
chr22:39184685-39186252	chr22	+	39184840	39186038	True	NM_005740,NM_004286	chr22,chr22	-,+	DNAL4,GTPBP1	4173,-83085
chr2:187455035-187455276	chr2	+	187455138	187455272	True	NM_002210,NM_001145000,NM_182521,NM_001144999	chr2,chr2,chr2,chr2	+,+,-,+	ITGAV,ITGAV,ZSWIM2,ITGAV	-399,-399,258675,9659
chr3:186738294-186738910	chr3	+	186738294	186738693	True	NM_003032,NM_052969	chr3,chr3	+,-	ST6GAL1,RPL39L	971,118627
chr15:25490294-25491220	chr15	+	25490299	25491255	True	NR_003353,NR_003358,NM_130838,NR_003344,NR_003352,NR_003351,NR_003357,NR_003356,NR_003355,NR_003354,NR_003302,NR_003303,NR_003359	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,-,+,+,+,+,+,+,+,+,+,+	SNORD115-38,SNORD115-43,UBE3A,SNORD115-29,SNORD115-37,SNORD115-36,SNORD115-42,SNORD115-41,SNORD115-40,SNORD115-39,SNORD115-10,SNORD115-11,SNORD115-44	-5365,3089,159448,3089,-7217,3089,1236,-111,-1589,-3457,1236,3089,4750
chr2:122041922-122042192	chr2	+	122042003	122042109	True	NR_023343,NM_014553	chr2,chr2	+,-	RNU4ATAC,TFCP2L1	246346,719
chr9:18482247-18482858	chr9	+	18482263	18482870	True	NM_153707,NM_001040272,NM_052866	chr9,chr9,chr9	-,+,+	FAM154A,ADAMTSL1,ADAMTSL1	550439,-8210,-8210
chr2:27542104-27543026	chr2	+	27542106	27542481	True	NM_187841,NM_002437	chr2,chr2	+,-	TRIM54,MPV17	-36860,3539
chr15:85289980-85290750	chr15	+	85290463	85290736	True	NM_014630,NM_014300	chr15,chr15	+,-	ZNF592,SEC11A	1081,-30789
chr12:14719951-14720154	chr12	+	14720040	14720192	True	NM_024829,NM_018179	chr12,chr12	-,+	PLBD1,ATF7IP	655,-201480
chr12:57345826-57346659	chr12	+	57345943	57346569	True	NM_003708,NM_007264	chr12,chr12	-,+	RDH16,GPR182	4899,41785
chr18:14972438-14972957	chr11	-	134818324	134818375	False	NM_018644,NR_033852	chr11,chr11	-,+	B3GAT1,LOC283177	-536512,-512000
chr18:14972438-14972957	chr18	+	14972446	14972780	True	NR_027417,NR_036153	chr18,chr18	-,+	LOC644669,MIR3156-2	353188,-142332
chr1:67634241-67634678	chr1	+	67634240	67634571	True	NM_001013674,NM_144701	chr1,chr1	-,+	C1orf141,IL23R	-40020,-2134
chr11:67166975-67167824	chr11	+	67167043	67167785	True	NM_198517,NM_002708,NM_001008709,NM_004584,NM_206873	chr11,chr11,chr11,chr11,chr11	+,-,-,+,-	TBC1D10C,PPP1CA,PPP1CA,RAD9A,PPP1CA	3626,1641,1641,-7671,1641
chr16:2058699-2059255	chr16	+	2058707	2059241	True	NM_178167,NM_001099456	chr16,chr16	-,+	ZNF598,NPW	572,10279
chr16:57652502-57653144	chr16	+	57652668	57653158	True	NM_001145771,NM_001145770,NM_001145773,NM_001145772,NM_033212,NM_201525,NM_201524,NM_005682	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,-,+,+,+	GPR56,GPR56,GPR56,GPR56,CCDC102A,GPR56,GPR56,GPR56	9260,751,9260,9260,-82191,9260,9260,751
chr2:43037546-43038037	chr2	+	43037700	43038050	True	NM_020744,NM_012205	chr2,chr2	+,-	MTA3,HAAO	-242080,-17949
chrX:71497614-71498232	chrX	+	71497815	71498077	True	NM_001170747,NM_001007	chrX,chrX	+,-	PIN4,RPS4X	-96340,-674
chr7:6308750-6310699	chr7	+	6308863	6310636	True	NM_006908,NM_004227	chr7,chr7	+,-	RAC1,CYTH3	103489,1656
chr22:18258545-18259135	chr22	+	18258572	18259067	True	NM_001196,NM_197967,NM_197966,NM_015367	chr22,chr22,chr22,chr22	-,-,-,+	BID,BID,BID,BCL2L13	-1314,-1314,-1793,-137138
chr11:22246975-22247727	chr11	+	22247091	22247763	True	NM_213599,NM_022725	chr11,chr11	+,-	ANO5,FANCF	-32430,399674
chr8:145641414-145641739	chr8	+	145641445	145641605	True	NM_130849,NM_017767,NM_174922,NM_013291	chr8,chr8,chr8,chr8	-,-,+,-	SLC39A4,SLC39A4,ADCK5,CPSF1	718,362,-43765,-6712
chrX:103267971-103268199	chrX	+	103268041	103268203	True	NM_001002916,NM_001164416	chrX,chrX	-,+	H2BFWT,H2BFM	103,26312
chr1:207668733-207669479	chr1	+	207668989	207669297	True	NR_029832,NM_000651,NM_000573	chr1,chr1,chr1	-,+,+	MIR29C,CR1,CR1	306037,175,175
chr1:76537543-76539184	chr1	+	76537546	76539152	True	NM_001160011,NM_152996,NR_026546	chr1,chr1,chr1	+,+,-	ST6GALNAC3,ST6GALNAC3,ASB17	1236,1236,-139430
chr8:61850462-61851590	chr8	+	61850478	61851500	True	NR_034003,NM_017780	chr8,chr8	-,+	LOC100130298,CHD7	28857,-259197
chr19:53361051-53361517	chr19	+	53361084	53361486	True	NM_199132,NM_152473,NM_001008801	chr19,chr19,chr19	-,+,-	ZNF468,HERV-V1,ZNF468	-182,155857,-182
chr17:40713329-40713980	chr17	+	40713726	40713950	True	NM_170607,NM_198204,NM_000413,NM_198205,NM_025233,NM_001042531,NM_001042530,NM_001042532,NM_013290,NM_001042529	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,+,+,+,-,+	MLX,MLX,HSD17B1,MLX,COASY,COASY,COASY,COASY,PSMC3IP,COASY	5127,5127,-9793,5127,141,141,141,141,15847,141
chr10:88520746-88521317	chr10	+	88520783	88521336	True	NM_024756,NM_004329	chr10,chr10	-,+	MMRN2,BMPR1A	196140,-4445
chr20:62599263-62599981	chr20	+	62599282	62600026	True	NM_012469,NM_020713	chr20,chr20	+,-	PRPF6,ZNF512B	12404,1242
chrX:73641664-73641977	chrX	+	73641676	73641870	True	NM_006517,NR_028379	chrX,chrX	+,-	SLC16A2,MIR374AHG	-642,-128267
chr5:175875359-175875582	chr5	+	175875361	175875577	True	NM_014613,NM_007097	chr5,chr5	+,-	FAF2,CLTB	-56,-31821
chr15:90356685-90357401	chr15	+	90356729	90357373	True	NM_001039958,NM_001150	chr15,chr15	+,-	MESP2,ANPEP	-37191,749
chr14:33403354-33403589	chr14	+	33403409	33403637	True	NM_001164749,NM_001165893,NR_027263,NM_173159,NM_022123	chr14,chr14,chr14,chr14,chr14	+,+,-,+,+	NPAS3,NPAS3,C14orf128,NPAS3,NPAS3	4821,4821,-857504,4821,4821
chr11:130639079-130639499	chr11	+	130639082	130639498	True	NM_139055,NM_014758	chr11,chr11	+,-	ADAMTS15,SNX19	-320264,146934
chr4:77228786-77229295	chr4	+	77228868	77229096	True	NM_003943,NM_005506	chr4,chr4	+,-	STBD1,SCARB2	-1242,-93816
chr15:80986951-80987156	chr15	+	80986961	80987111	True	NM_021214,NR_030393	chr15,chr15	+,-	FAM108C1,MIR549	540,147353
chr19:10544626-10544971	chr19	+	10544755	10544827	True	NM_007065,NM_001111309,NM_001111308	chr19,chr19,chr19	-,+,+	CDC37,PDE4A,PDE4A	-30484,-1703,-3293
chr22:50315433-50315724	chr22	+	50315514	50315772	True	NM_024324,NM_024105,NM_001135101	chr22,chr22,chr22	+,-,+	CRELD2,ALG12,CRELD2	-3282,-3408,-3282
chr14:94578376-94579595	chr14	+	94578434	94579482	True	NM_032036,NM_001130080,NM_005532	chr14,chr14,chr14	-,+,+	IFI27L2,IFI27,IFI27	16525,-1407,-1407
chr4:57627743-57629252	chr4	+	57627749	57629153	True	NM_021114,NM_005612	chr4,chr4	-,+	SPINK2,REST	58790,144888
chr3:50645709-50647696	chr3	+	50645727	50647735	True	NM_013324,NM_145071,NM_004635	chr3,chr3,chr3	-,-,+	CISH,CISH,MAPKAPK3	1577,1577,6865
chr7:48017413-48018898	chr7	+	48017507	48018855	True	NM_001100159,NM_004507,NR_037917	chr7,chr7,chr7	+,-,-	C7orf57,HUS1,HUS1	56261,417,417
chr1:48443344-48444148	chr1	+	48443440	48444163	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	18449,244193
chr16:216559-216878	chr16	+	216615	216867	True	NM_001077350,NM_001003938,NM_000517,NM_000558	chr16,chr16,chr16,chr16	-,+,+,+	NPRL3,HBM,HBA2,HBA1	-27943,-693,5978,9811
chr19:55234945-55235239	chr19	+	55234955	55235251	True	NM_153443,NM_001127255	chr19,chr19	+,-	KIR3DL3,NLRP7	732,223672
chr19:56134693-56135034	chr19	+	56134746	56135072	True	NM_001195605,NM_203374	chr19,chr19	+,-	ZNF865,ZNF784	-9838,919
chr17:7298145-7298800	chr17	+	7298177	7298645	True	NM_152766,NM_020360,NM_020795,NM_001201576,NR_037719	chr17,chr17,chr17,chr17,chr17	-,-,+,-,-	C17orf61,PLSCR3,NLGN2,PLSCR3,C17orf61-PLSCR3	8855,-15,12856,-15,8855
chr15:34270719-34271564	chr15	+	34271035	34271450	True	NM_012125,NM_020371	chr15,chr15	+,-	CHRM5,AVEN	-10004,59903
chr19:51629203-51630441	chr19	+	51629444	51630324	True	NM_145232,NM_001198558,NM_014441	chr19,chr19,chr19	-,+,+	CTU1,SIGLEC9,SIGLEC9	-17797,-1358,-1358
chr11:44975263-44977112	chr11	+	44975280	44977086	True	NM_006034,NR_026681,NM_001076787	chr11,chr11,chr11	-,+,-	TP53I11,LOC221122,TP53I11	-2672,18366,-2672
chr19:36546236-36546922	chr19	+	36546287	36546717	True	NM_001083961,NM_152658,NM_173636	chr19,chr19,chr19	+,-,+	WDR62,THAP8,WDR62	-563,-623,-563
chr2:107155456-107157312	chr2	+	107155487	107156928	True	NM_001144013,NR_003506	chr2,chr2	-,+	RGPD3,PLGLA	-70686,-152769
chr6:89670854-89672066	chr6	+	89671301	89672030	True	NM_006813,NM_003800	chr6,chr6	+,-	PNRC1,RNGTT	118398,1375
chr19:39523572-39523774	chr19	+	39523587	39523802	True	NM_178820,NM_001004318	chr19,chr19	-,+	FBXO27,PAPL	-389,51142
chr6:158589569-158589849	chr6	+	158589653	158589831	True	NM_207118,NM_032861	chr6,chr6	+,-	GTF2H5,SERAC1	-326,-341
chr5:68488671-68489579	chr5	+	68489126	68489212	True	NM_176816,NM_022909	chr5,chr5	-,+	CCDC125,CENPH	127248,-3814
chr9:132934075-132934293	chr9	+	132934113	132934239	True	NM_014286,NM_015033	chr9,chr9	+,-	NCS1,FNBP1	617,-128640
chr17:12567153-12568007	chr17	+	12567317	12567899	True	NM_001146312,NM_153604,NM_001165962	chr17,chr17,chr17	+,+,-	MYOCD,MYOCD,ELAC2	1307,1307,353532
chr12:13354614-13356129	chr12	+	13354662	13355988	True	NM_001080555,NM_001423	chr12,chr12	-,+	GSG1,EMP1	-98043,-5111
chr12:4736270-4737876	chr12	+	4736346	4737917	True	NM_006422,NM_005002	chr12,chr12	-,+	AKAP3,NDUFA9	16477,20346
chr17:30676968-30677288	chr17	+	30676986	30677326	True	NM_001098507,NM_022344,NR_030362,NM_001032293,NM_003457	chr17,chr17,chr17,chr17,chr17	+,-,+,+,+	ZNF207,C17orf75,MIR632,ZNF207,ZNF207	-102,-7797,75,-102,-102
chr1:15256892-15257151	chr1	+	15256975	15257173	True	NM_001018000,NM_001018001,NR_027136	chr1,chr1,chr1	+,+,-	KAZN,KAZN,C1orf126	-6401,-730,221837
chr10:127512177-127512487	chr10	+	127512207	127512473	True	NM_000375,NM_016567,NM_078468,NM_078469	chr10,chr10,chr10,chr10	-,+,+,+	UROS,BCCIP,BCCIP,BCCIP	-370,-161,-161,-161
chr10:75449838-75451409	chr10	+	75450498	75450749	True	NM_001144000,NM_004922	chr10,chr10	-,+	AGAP5,SEC24C	6862,53381
chr1:46925248-46925993	chr1	+	46925556	46925858	True	NM_147192,NM_001097611	chr1,chr1	+,-	DMBX1,KNCN	46809,91079
chr19:51415680-51416164	chr19	+	51415689	51416189	True	NM_004917,NM_005551	chr19,chr19	-,+	KLK4,KLK2	-1695,-39051
chr11:85760054-85760362	chr11	+	85760343	85760409	True	NM_001008660,NM_173556	chr11,chr11	-,+	PICALM,CCDC83	19753,-194259
chr12:7901601-7902369	chr12	+	7901633	7902223	True	NM_203503,NM_001145465,NM_130441	chr12,chr12,chr12	-,+,-	CLEC4C,NANOGNB,CLEC4C	-104,15588,-104
chr1:94586689-94587029	chr1	+	94586793	94587073	True	NM_000350,NR_030621	chr1,chr1	-,+	ABCA4,MIR760	-88,-274456
chr16:53076580-53077975	chr16	+	53076624	53077680	True	NR_033920,NM_025134	chr16,chr16	-,+	LOC643714,CHD9	-435737,11264
chr1:70385491-70385989	chr1	+	70385591	70385929	True	NM_017768,NR_023916	chr1,chr1	-,+	LRRC40,PIN1P1	285483,-637
chr9:108210822-108211783	chr9	+	108210956	108211816	True	NM_001145313,NM_031919,NM_207647,NM_005502	chr9,chr9,chr9,chr9	+,+,+,-	FSD1L,FSD1L,FSD1L,ABCA1	-692,-692,-682,-520429
chr21:32119455-32121352	chr21	+	32119501	32120960	True	NM_181617,NM_001128077,NM_181619	chr21,chr21,chr21	-,+,-	KRTAP21-2,KRTAP20-3,KRTAP21-1	19,-104380,6796
chr1:155657838-155658247	chr1	+	155657840	155658294	True	NM_001198903,NM_033657,NM_139118,NM_004632,NM_001198899,NM_018253,NM_001199849,NM_001199851,NM_001199850,NM_139121,NM_001198900,NM_001198901,NM_001198902,NM_139119,NM_001198904,NM_001198905,NM_001198906	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,+,-,+,-,-,+,+,+,-,-,-,-,-,-,-,-	YY1AP1,DAP3,YY1AP1,DAP3,YY1AP1,YY1AP1,DAP3,DAP3,DAP3,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1	203,590,579,590,-8220,324,587,587,587,520,324,575,271,321,203,324,579
chr3:141206416-141206678	chr3	+	141206470	141206634	True	NM_006506,NM_001178140	chr3,chr3	+,-	RASA2,TFDP2	-595,512645
chr3:185655809-185656733	chr3	+	185655965	185656220	True	NM_004593,NR_033752	chr3,chr3	-,+	TRA2B,LOC344887	-41,30046
chr16:69761377-69761722	chr16	+	69761477	69761651	True	NM_001025433,NM_000903,NM_199423,NM_001025434	chr16,chr16,chr16,chr16	-,-,+,-	NQO1,NQO1,WWP2,NQO1	-944,-944,34622,-944
chr5:83018025-83018244	chr5	+	83018099	83018209	True	NM_001884,NM_004385	chr5,chr5	-,+	HAPLN1,VCAN	-1203,-250657
chr8:127570831-127571630	chr8	+	127570900	127571674	True	NM_001159542,NM_174911	chr8,chr8	+,-	POU5F1B,FAM84B	856182,-189
chr14:59103554-59104298	chr14	+	59103576	59104299	True	NM_016651,NM_012460,NM_001079520	chr14,chr14,chr14	+,-,+	DACT1,TIMM9,DACT1	457,-209344,457
chr2:220495445-220495952	chr2	+	220495513	220495981	True	NM_001173408,NM_005070,NM_201574	chr2,chr2,chr2	-,+,+	OBSL1,SLC4A3,SLC4A3	-59245,-3272,-3272
chr19:6768378-6768820	chr19	+	6768613	6768679	True	NM_005490,NM_005428	chr19,chr19	-,+	SH2D3A,VAV1	-1090,4042
chr18:28709355-28710582	chr18	+	28709521	28710631	True	NM_001942,NM_024422	chr18,chr18	+,-	DSG1,DSC2	187420,-27133
chr5:76384890-76386155	chr5	+	76384897	76386197	True	NR_003014,NR_024398,NM_032367	chr5,chr5,chr5	-,+,-	SNORA47,LOC728723,ZBED3	-8501,-2325,-1867
chr11:65327096-65327811	chr11	+	65327286	65327686	True	NM_001130144,NM_021070,NM_001164266,NM_006396	chr11,chr11,chr11,chr11	-,-,-,+	LTBP3,LTBP3,LTBP3,SSSCA1	-1587,-1587,-1587,10256
chr19:12208809-12210607	chr19	+	12208936	12210174	True	NM_001203250,NM_001080404,NR_027049	chr19,chr19,chr19	-,-,+	ZNF20,ZNF878,ZNF788	41098,-41809,-5916
chr1:110256085-110256474	chr1	+	110256142	110256502	True	NM_000851,NM_000849	chr1,chr1	+,-	GSTM5,GSTM3	-1329,27208
chr17:62401029-62402464	chr17	+	62401106	62402476	True	NM_000442,NM_001085423	chr17,chr17	-,+	PECAM1,C17orf60	4657,59092
chr9:132586731-132587331	chr9	+	132586946	132587204	True	NM_001110303,NM_000113	chr9,chr9	+,-	USP20,TOR1A	10491,-505
chr7:74865981-74866337	chr7	+	74865994	74866271	True	NM_001145064,NR_003664	chr7,chr7	-,+	GATSL2,SPDYE8P	1120,70261
chr7:74865981-74866337	chr7	-	72570420	72570697	False	NR_002206,NR_003664,NR_003580	chr7,chr7,chr7	+,-,+	GTF2IP1,SPDYE8P,LOC100093631	-1445,-70111,-1459
chr7:74865981-74866337	chr7	+	74651777	74652054	False	NR_002206,NM_001003795,NR_003580	chr7,chr7,chr7	-,+,-	GTF2IP1,GTF2IRD2B,LOC100093631	1441,-143492,1455
chr7:74865981-74866337	chr7	-	74380178	74380455	False	NM_001025202,NM_001145063	chr7,chr7	-,+	STAG3L2,GATSL1	-73447,-1146
chr19:34115042-34116150	chr19	+	34115095	34115883	True	NM_001166057,NM_001127895,NM_001127896	chr19,chr19,chr19	-,+,+	PEPD,CHST8,CHST8	-102296,-2285,-2273
chr22:21625374-21625774	chr22	+	21625552	21625618	True	NR_024583,NR_002829	chr22,chr22	+,-	POM121L8P,P2RX6P	11095,-227014
chr22:21625374-21625774	chr22	+	18824315	18824381	False	NM_005675,NR_003267	chr22,chr22	+,-	DGCR6,GGT3P	69354,-44841
chr22:21625374-21625774	chr22	-	21493488	21493554	False	NR_037566,NR_002829	chr22,chr22	+,-	BCRP2,P2RX6P	-36238,-94950
chr1:24020324-24020722	chr1	+	24020367	24020587	True	NM_001199802,NM_001127621,NM_000975	chr1,chr1,chr1	+,-,+	RPL11,GALE,RPL11	-2149,105525,-2149
chr9:130693362-130693711	chr9	+	130693403	130693621	True	NM_001135219,NM_001018078,NM_173492,NM_003863	chr9,chr9,chr9,chr9	-,+,-,-	PIP5KL1,FPGS,PIP5KL1,DPM2	-327,-127946,-3633,7192
chr12:119746131-119747729	chr12	+	119746435	119747766	True	NR_024246,NM_178499	chr12,chr12	-,+	LOC144742,CCDC60	-5250,24750
chr21:35896712-35897240	chr21	+	35896731	35897262	True	NM_053277,NM_203418	chr21,chr21	+,-	CLIC6,RCAN1	144425,2049
chr9:73026464-73027033	chr9	+	73026660	73026958	True	NM_001206,NM_015110	chr9,chr9	-,+	KLF9,SMC5	2665,-152839
chr7:856890-857109	chr7	+	856907	857065	True	NM_025154,NM_001164759,NM_001171945,NM_001171944,NM_001171946	chr7,chr7,chr7,chr7,chr7	+,-,+,+,+	SUN1,PRKAR1B,SUN1,SUN1,SUN1	-706,-89594,-706,-706,-1764
chr17:48353031-48353568	chr17	+	48353030	48353194	True	NM_153229,NM_001168215,NM_000088	chr17,chr17,chr17	+,+,-	TMEM92,TMEM92,COL1A1	-1295,-4316,-74030
chr19:39139760-39140153	chr19	+	39139767	39140180	True	NM_004924,NM_007181	chr19,chr19	+,-	ACTN4,MAP4K1	-1551,-31124
chr15:71041787-71043162	chr15	+	71042129	71042924	True	NM_018003,NM_001199017	chr15,chr15	-,+	UACA,LRRC49	12977,142003
chr1:87596932-87597641	chr1	+	87596966	87597618	True	NR_026989,NR_026988,NR_026987,NR_026986,NR_026985,NM_203341	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-	LOC339524,LOC339524,LOC339524,LOC339524,LOC339524,SEP15	-1581,-1581,-10,-10,-10,-216859
chr5:172663506-172664021	chr5	+	172663565	172663935	True	NM_004387,NM_013980,NM_001166175,NM_001166176	chr5,chr5,chr5,chr5	-,+,-,-	NKX2-5,BNIP1,NKX2-5,NKX2-5	-1250,-92171,-1250,-1250
chr6:39761302-39762856	chr6	+	39761570	39762868	True	NM_145027,NM_001201427,NM_015345	chr6,chr6,chr6	-,+,+	KIF6,DAAM2,DAAM2	-68389,-1462,-848
chr3:183851932-183852960	chr3	+	183852291	183852933	True	NM_003907,NM_005787	chr3,chr3	+,-	EIF2B5,ALG3	-72,113876
chr11:96075063-96075736	chr11	+	96075099	96075612	True	NR_036125,NM_032427	chr11,chr11	+,-	MIR1260B,MAML2	-548,790
chr3:128444908-128445171	chr3	+	128445087	128445155	True	NM_002950,NM_004637	chr3,chr3	-,+	RPN1,RAB7A	-75368,-159
chr17:62080656-62081444	chr17	+	62080773	62081307	True	NM_001164257,NM_000873,NM_001191031,NM_001191030,NM_001191029	chr17,chr17,chr17,chr17,chr17	+,-,+,+,+	C17orf72,ICAM2,C17orf72,C17orf72,C17orf72	-5113,3026,-5113,-5113,-5113
chr5:124065157-124066994	chr5	+	124065241	124066801	True	NM_004384,NM_020747	chr5,chr5	+,-	CSNK1G3,ZNF608	-1217505,14061
chr5:128430537-128430868	chr5	+	128430615	128430689	True	NM_016048,NM_001999	chr5,chr5	+,-	ISOC1,FBN2	-224,-556880
chr6:167658106-167659329	chr6	+	167658108	167659364	True	NM_005299,NM_001143947	chr6,chr6	-,+	GPR31,UNC93A	-86789,45438
chr6:41166893-41168839	chr6	+	41166907	41168575	True	NM_024807,NM_198153	chr6,chr6	-,+	TREML2,TREML4	400,27486
chr17:8817216-8817993	chr17	+	8817446	8818014	True	NM_004822,NM_014308	chr17,chr17	+,-	NTN1,PIK3R5	106844,-1612
chr22:21044986-21045580	chr22	+	21044998	21045088	True	NM_002650,NR_024592	chr22,chr22	-,+	PI4KA,POM121L4P	43917,-1206
chr6:14665930-14667710	chr6	+	14666304	14667631	True	NM_001031713,NM_004233	chr6,chr6	-,+	CCDC90A,CD83	-851515,-548490
chr16:30968519-30968845	chr16	+	30968577	30968829	True	NM_014712,NM_152288,NR_024348	chr16,chr16,chr16	+,+,-	SETD1A,ORAI3,FBXL19-AS1	-13,-8223,-33987
chr16:69794389-69794734	chr16	+	69794539	69794738	True	NM_014062,NM_199423,NM_007014	chr16,chr16,chr16	-,+,+	NOB1,WWP2,WWP2	-5710,1535,1535
chr10:43896452-43897450	chr10	+	43896661	43897499	True	NM_004966,NM_001098208,NM_173160,NM_001098204,NM_001098205,NM_001098206,NM_001098207	chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,-,+,-,-,-,-	HNRNPF,HNRNPF,FXYD4,HNRNPF,HNRNPF,HNRNPF,HNRNPF	7207,-4382,-29620,7247,6883,5850,-3867
chr12:10336905-10337471	chr12	+	10336965	10337424	True	NM_153022,NM_002543	chr12,chr12	+,-	C12orf59,OLR1	-5466,-12175
chr10:114613948-114614268	chr10	+	114613950	114614172	True	NM_022494,NR_015409	chr10,chr10	-,+	ZDHHC6,LOC143188	-407278,-3328
chr17:39222524-39222908	chr17	+	39222565	39222935	True	NM_001165252,NM_033184,NM_033061	chr17,chr17,chr17	-,-,+	LOC730755,KRTAP2-4,KRTAP4-7	-6221,-434,17523
chr7:143579728-143579936	chr7	+	143579799	143579951	True	NM_014719,NM_001004685	chr7,chr7	-,+	FAM115A,OR2F2	19271,52374
chr13:28493062-28493288	chr13	+	28493066	28493332	True	NM_000209,NM_001265	chr13,chr13	+,-	PDX1,CDX2	835,50035
chr7:138141084-138141938	chr7	+	138141233	138141509	True	NM_174959,NM_015905,NM_003852	chr7,chr7,chr7	-,+,+	SVOPL,TRIM24,TRIM24	207510,3569,3569
chr4:15969300-15971300	chr4	+	15969575	15970833	True	NM_031950,NM_001775	chr4,chr4	-,+	FGFBP2,CD38	-4716,-189704
chr11:68607877-68608233	chr11	+	68607876	68608232	True	NM_001031847,NM_002180,NM_001876	chr11,chr11,chr11	-,+,-	CPT1A,IGHMBP2,CPT1A	1217,63086,1217
chr9:25226-26905	chr12	-	77705	77755	False	NR_028269,NR_026823	chr12,chr12	+,-	LOC100288778,FAM138D	10228,71707
chr9:25226-26905	chr19	+	67149	67807	False	NR_026820,NR_026818,NM_001005240,NR_033266	chr19,chr19,chr19,chr19	-,-,+,-	FAM138F,FAM138A,OR4F17,WASH5P	9933,9933,42871,3209
chr9:25226-26905	chr15	-	102504963	102505621	False	NR_026819,NR_034090	chr15,chr15	+,-	FAM138E,DDX11L9	-9926,13731
chr9:25226-26905	chr1	+	25541	26199	True	NM_001005221,NR_028325	chr1,chr1	-,+	OR4F29,LOC100132062	595885,297692
chrX:21874647-21874923	chrX	+	21874689	21874955	True	NM_014332,NM_206923	chrX,chrX	-,+	SMPX,YY2	-98459,-635
chr17:62048832-62049122	chr17	+	62048858	62049170	True	NM_001164257,NM_000334	chr17,chr17	+,-	C17orf72,SCN4A	26540,1158
chr1:3526353-3527365	chr1	+	3526418	3527260	True	NM_001409,NM_182752	chr1,chr1	-,+	MEGF6,TPRG1L	849,14295
chr4:40055360-40055669	chr4	+	40055454	40055584	True	NM_018177,NR_027277	chr4,chr4	+,-	N4BP2,LOC344967	2939,3285
chr5:2752613-2752847	chr5	+	2752621	2752876	True	NM_178569,NM_001134222,NM_033267	chr5,chr5,chr5	+,-,-	C5orf38,IRX2,IRX2	-410,-852,-852
chr10:12876611-12876964	chr10	+	12876615	12876951	True	NR_027322,NM_031455	chr10,chr10	+,-	LOC283070,CCDC3	-1543,166803
chr2:238472336-238472646	chr2	+	238472404	238472694	True	NM_015893,NM_022449	chr2,chr2	+,-	PRLH,RAB17	2522,27125
chr6:4078803-4079005	chr6	+	4078802	4078866	True	NM_001085401,NM_173563	chr6,chr6	+,-	C6orf201,C6orf146	573,641
chr3:45188301-45188686	chr3	+	45188402	45188584	True	NM_022842,NM_178181,NM_003278	chr3,chr3,chr3	-,-,+	CDCP1,CDCP1,CLEC3B	-488,-488,-120694
chr22:42337205-42338474	chr22	+	42337248	42338342	True	NM_024053,NM_001002876,NM_001110215,NR_024355	chr22,chr22,chr22,chr22	-,-,-,+	CENPM,CENPM,CENPM,LOC339674	4856,4856,-1025,9848
chr11:70932169-70932432	chr11	+	70932323	70932409	True	NM_018161,NM_012309	chr11,chr11	+,-	NADSYN1,SHANK2	231807,3449
chr20:61850090-61851434	chr20	+	61850551	61851379	True	NM_022161,NM_017798	chr20,chr20	+,-	BIRC7,YTHDF1	15896,-3013
chr7:23636528-23636734	chr7	+	23636616	23636760	True	NM_138771,NR_002711	chr7,chr7	+,-	CCDC126,CLK2P	237,-10470
chr4:56823655-56825223	chr4	+	56823769	56824926	True	NM_006681,NM_025009	chr4,chr4	-,+	NMU,CEP135	-321304,-8793
chr16:28503445-28503995	chr16	+	28503450	28503893	True	NM_001042432,NM_018690,NM_000086	chr16,chr16,chr16	-,+,-	CLN3,APOBR,CLN3	67,2099,-47
chr11:33064534-33066237	chr11	+	33064969	33066280	True	NM_018393,NM_001145541,NM_001326	chr11,chr11,chr11	+,+,-	TCP11L1,TCP11L1,CSTF3	-4065,-3467,116814
chr19:49074544-49075163	chr19	+	49074837	49075209	True	NM_017708,NM_004605	chr19,chr19	-,+	FAM83E,SULT2B1	41535,3783
chr13:78120942-78121407	chr13	+	78120963	78121319	True	NM_144777,NR_037438	chr13,chr13	+,-	SCEL,MIR3665	-11206,150982
chr17:34884264-34884619	chr17	+	34884358	34884653	True	NM_001163735,NM_178517,NM_001033580,NM_025109	chr17,chr17,chr17,chr17	-,+,-,-	MYO19,PIGW,MYO19,MYO19	6703,6749,6703,6703
chr3:186503801-186505330	chr3	+	186504187	186505361	True	NR_002989,NM_001967,NR_002588,NR_031650,NM_002916,NR_002587,NR_002586	chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,-,+,+	SNORA81,EIF4A2,SNORA4,MIR1248,RFC4,SNORD2,SNORA63	-83,-2877,40,-86,18979,-1653,-49
chr1:46246458-46247259	chr1	+	46246579	46247288	True	NM_005897,NM_015112	chr1,chr1	-,+	IPP,MAST2	-30094,21996
chr18:23651601-23652263	chr18	+	23651861	23652162	True	NM_001007559,NM_001025096	chr18,chr18	-,+	SS18,PSMA8	18506,61653
chr8:38973488-38974524	chr8	+	38973997	38974079	True	NM_078473,NM_145004	chr8,chr8	-,+	TM2D2,ADAM32	-119956,-9004
chr2:130738210-130738534	chr2	+	130738215	130738461	True	NR_036537,NM_032144	chr2,chr2	-,+	LOC100131320,RAB6C	-170,-1032
chr2:130738210-130738534	chr2	-	132120532	132120766	False	NM_001077637,NR_036499	chr2,chr2	-,+	LOC150786,LOC389043	1016,39707
chr5:110427344-110428009	chr5	+	110427346	110428028	True	NM_139281,NM_001039763	chr5,chr5	+,-	WDR36,TMEM232	-15,-364896
chr8:56960579-56961363	chr8	+	56960698	56961217	True	NM_001011667,NR_002437	chr8,chr8	+,-	CHCHD7,SNORD54	163097,25300
chr14:21467907-21468924	chr14	+	21468038	21468602	True	NM_014579,NM_201538,NR_033419	chr14,chr14,chr14	+,-,+	SLC39A2,NDRG2,SLC39A2	-676,24724,-676
chr2:10221033-10221693	chr2	+	10221066	10221583	True	NM_001177718,NM_001037160	chr2,chr2	+,-	KLF11,CYS1	-36746,-528
chr3:132465851-132466418	chr3	+	132465880	132466324	True	NR_002811,NM_153240	chr3,chr3	+,-	NCRNA00119,NPHP3	-24745,-24577
chr1:228782661-228782866	chr1	+	228782678	228782850	True	NR_002834,NM_033445,NR_037962	chr1,chr1,chr1	+,-,+	DUSP5P,HIST3H2A,RHOU	-2072,-137118,-2335
chr9:115910749-115911463	chr9	+	115910925	115911433	True	NM_001860,NR_024376	chr9,chr9	+,-	SLC31A2,NCRNA00256B	1804,-36968
chr20:4231142-4232113	chr20	+	4231171	4232091	True	NM_000678,NR_033917	chr20,chr20	-,+	ADRA1D,LOC728228	-1512,-57485
chr2:224807618-224808396	chr2	+	224808074	224808445	True	NM_020830,NM_022915	chr2,chr2	-,+	WDFY1,MRPL44	1660,13675
chr15:101464276-101464885	chr15	+	101464282	101464860	True	NM_001040616,NM_024652	chr15,chr15	-,+	LINS,LRRK1	-321837,-4873
chr7:28446963-28447865	chr7	+	28447037	28447887	True	NM_182898,NM_175061	chr7,chr7	+,-	CREB5,JAZF1	4256,-226600
chr2:192701393-192701668	chr2	+	192701393	192701691	True	NM_004657,NM_001031716	chr2,chr2	-,+	SDPR,OBFC2A	10365,-158583
chr5:41904557-41905531	chr5	+	41904743	41905332	True	NM_000436,NM_175921	chr5,chr5	-,+	OXCT1,C5orf51	-33952,-324
chr21:17122412-17123084	chr21	+	17122428	17122925	True	NM_003489,NM_013396	chr21,chr21	-,+	NRIP1,USP25	-685302,-19996
chr14:90535471-90535728	chr14	+	90535667	90535732	True	NM_022054,NM_145231	chr14,chr14	+,-	KCNK13,EFCAB11	-7619,-114578
chr19:56437997-56438657	chr19	+	56437997	56438476	True	NM_176810,NM_176811	chr19,chr19	-,+	NLRP13,NLRP8	5283,20721
chr10:33073590-33075543	chr10	+	33074065	33075422	True	NM_024688,NM_033668	chr10,chr10	+,-	C10orf68,ITGB1	-217477,149120
chr5:56112495-56112739	chr5	+	56112557	56112753	True	NM_152622,NM_005921	chr5,chr5	-,+	MIER3,MAP3K1	135251,-1708
chr22:25830192-25830652	chr22	+	25830195	25830646	True	NM_001135772,NR_033733	chr22,chr22	-,+	LRP5L,CRYBB2P1	-52651,13407
chr22:25830192-25830652	chr22	-	23937424	23937643	False	NM_153615,NM_152855	chr22,chr22	+,-	RGL4,IGLL1	95404,-14929
chr10:122612966-122613475	chr10	+	122613082	122613517	True	NM_018117,NR_033850	chr10,chr10	+,-	WDR11,LOC283089	-2454,-2391
chr7:72683313-72684481	chr7	+	72683377	72684488	True	NR_002164,NR_003186	chr7,chr7	-,+	GTF2IRD2P1,NCF1B	1220,-48755
chr7:72683313-72684481	chr7	+	74238169	74238417	False	NM_173537,NM_000265	chr7,chr7	-,+	GTF2IRD2,NCF1	29474,-49911
chr7:72683313-72684481	chr7	-	74537854	74538038	False	NM_030798,NM_001003795	chr7,chr7	-,+	WBSCR16,GTF2IRD2B	-48155,-29558
chr1:15763428-15764568	chr1	+	15763469	15764113	True	NM_001229,NM_007272	chr1,chr1	-,+	CASP9,CTRC	86877,824
chr3:49709382-49710072	chr3	+	49709409	49709905	True	NM_001640,NM_020998	chr3,chr3	+,-	APEH,MST1	1529,16341
chr7:33939612-33941528	chr7	+	33939649	33941550	True	NM_133468,NM_203288	chr7,chr7	+,-	BMPER,RP9	3561,-790647
chr6:25106876-25108095	chr6	+	25106961	25108129	True	NR_002174,NM_001173977	chr6,chr6	-,+	CMAH,LRRC16A	29974,171526
chr7:99573039-99574458	chr7	+	99573345	99574435	True	NM_001185,NR_036679	chr7,chr7	-,+	AZGP1,AZGP1P1	-74,3949
chr11:320938-321145	chr11	+	320941	321077	True	NM_021034,NM_003641	chr11,chr11	-,+	IFITM3,IFITM1	-27,-7001
chr5:88177709-88178221	chr5	+	88177708	88178231	True	NM_006467,NM_002397,NM_001193350	chr5,chr5,chr5	+,-,-	POLR3G,MEF2C,MEF2C	1592449,1103,1103
chr11:69291489-69292338	chr11	+	69291503	69292329	True	NM_153451,NM_053056	chr11,chr11	-,+	ORAOV1,CCND1	197886,163543
chr22:41844584-41845122	chr22	+	41844621	41845133	True	NM_001098,NM_016272	chr22,chr22	+,-	ACO2,TOB2	19995,-1594
chr9:78506490-78506807	chr9	+	78506512	78506772	True	NM_006200,NR_031679,NM_001190482	chr9,chr9,chr9	+,-,+	PCSK5,MIR548H3,PCSK5	-1003,-167768,-1003
chr11:64794978-64795330	chr11	+	64794985	64795376	True	NM_013306,NM_147777,NM_005468,NM_138456	chr11,chr11,chr11,chr11	+,+,-,-	SNX15,SNX15,NAALADL1,BATF2	-156,-156,30683,-30468
chr2:234155402-234155845	chr2	+	234155578	234155894	True	NM_019850,NM_001190267,NM_001190266,NM_198890,NM_030803,NM_017974	chr2,chr2,chr2,chr2,chr2,chr2	-,+,+,+,+,+	NGEF,ATG16L1,ATG16L1,ATG16L1,ATG16L1,ATG16L1	-277627,4322,4322,4322,4322,4322
chr8:6574208-6575262	chr8	+	6574489	6575259	True	NM_018361,NM_207411	chr8,chr8	+,-	AGPAT5,XKR5	-8667,117957
chr9:5230947-5231537	chr9	+	5230965	5231489	True	NM_007179,NM_002195	chr9,chr9	-,+	INSL6,INSL4	-45347,29
chr20:44521158-44521411	chr20	+	44521194	44521428	True	NM_000308,NM_080749,NM_001167594,NM_080608,NM_001127695	chr20,chr20,chr20,chr20,chr20	+,-,+,-,+	CTSA,NEURL2,CTSA,C20orf165,CTSA	-1654,-1293,-1654,-4956,-1654
chr4:155297288-155297962	chr4	+	155297425	155297974	True	NM_017639,NM_001184741	chr4,chr4	-,+	DCHS2,FGB	14532,186157
chr3:32145791-32146617	chr3	+	32145853	32146248	True	NM_017784,NM_015141	chr3,chr3	-,+	OSBPL10,GPD1L	-122511,1754
chr14:77496939-77497366	chr14	+	77496952	77497412	True	NM_024496,NM_033426	chr14,chr14	-,+	IRF2BPL,KIAA1737	-1918,67165
chr7:134574818-134575809	chr7	+	134574945	134575847	True	NM_033139,NM_033140,NM_024033	chr7,chr7,chr7	+,+,-	CALD1,CALD1,C7orf49	303,303,279735
chr17:72711547-72711886	chr17	+	72711558	72711824	True	NM_001163989,NM_139018	chr17,chr17	+,-	RAB37,CD300LF	21134,-2450
chr12:133706009-133706537	chr12	+	133706124	133706519	True	NM_015394,NM_001191054	chr12,chr12	+,-	ZNF10,LOC647589	694,105953
chr5:172262052-172262771	chr5	+	172262434	172262766	True	NM_004417,NM_001031711	chr5,chr5	-,+	DUSP1,ERGIC1	-64231,-1262
chr2:29294262-29294525	chr2	+	29294269	29294463	True	NM_001029883,NM_024692	chr2,chr2	-,+	C2orf71,CLIP4	2714,43844
chr22:39417801-39418742	chr22	+	39417985	39418514	True	NM_152426,NM_175709,NM_014508	chr22,chr22,chr22	+,-,+	APOBEC3D,CBX7,APOBEC3C	-918,130079,-7771
chr5:770597-770911	chr5	+	770617	770959	True	NM_001166260,NM_007030	chr5,chr5	+,-	TRIP13,TPPP	122009,-77107
chr5:770597-770911	chr5	+	678564	678630	False	NM_018140,NM_007030	chr5,chr5	+,-	CEP72,TPPP	-66210,14930
chr2:241808400-241809090	chr2	+	241808406	241809058	True	NM_024861,NM_000030	chr2,chr2	-,+	C2orf54,AGXT	22444,-295
chr16:54318883-54319243	chr16	+	54318890	54319224	True	NM_001080432,NM_024336	chr16,chr16	+,-	FTO,IRX3	-581066,1204
chr14:105196652-105197979	chr14	+	105196835	105197739	True	NM_199165,NM_005163,NM_152328	chr14,chr14,chr14	+,-,+	ADSSL1,AKT1,ADSSL1	-658,62249,-6352
chr5:156891605-156892787	chr5	+	156891719	156892581	True	NM_001099287,NM_033274,NM_001172292	chr5,chr5,chr5	+,-,+	NIPAL4,ADAM19,NIPAL4	-4751,110252,-4751
chr2:106681057-106681540	chr2	+	106681143	106681557	True	NM_025076,NM_032411	chr2,chr2	-,+	UXS1,C2orf40	129288,555
chr1:151966212-151966438	chr1	+	151966219	151966351	True	NR_024237,NM_002966	chr1,chr1	+,-	LOC100132111,S100A10	-155325,413
chr19:34744243-34744675	chr19	+	34744285	34744578	True	NR_027620,NM_014686	chr19,chr19	-,+	LOC643719,KIAA0355	324069,877
chr10:115513306-115514322	chr10	+	115513306	115514143	True	NM_001193435,NM_001193434,NM_024889,NM_198060	chr10,chr10,chr10,chr10	+,+,+,-	C10orf81,C10orf81,C10orf81,NRAP	-2152,-2152,-2152,-89501
chrX:153770311-153770945	chrX	+	153770323	153770941	True	NM_003639,NM_001099856,NM_001099857,NM_001042351,NM_000402,NM_001145255	chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,-,-,+	IKBKG,IKBKG,IKBKG,G6PD,G6PD,IKBKG	5120,-23,4620,4896,4342,4620
chr12:10675379-10676309	chr12	+	10675378	10676328	True	NM_213658,NM_007334	chr12,chr12	-,+	KLRC1,KLRD1	-68163,-215017
chr14:20688720-20688921	chr14	+	20688890	20688959	True	NM_001004480,NM_138376	chr14,chr14	+,-	OR11H6,TTC5	2909,85253
chr6:110796932-110797157	chr6	+	110796950	110797206	True	NM_015891,NM_033125	chr6,chr6	+,-	CDC40,SLC22A16	-295389,688
chr3:100120854-100121264	chr3	+	100120862	100121307	True	NM_014820,NM_001085451	chr3,chr3	-,+	TOMM70A,LNP1	-637,-876
chr10:94350747-94351108	chr10	+	94350746	94350983	True	NM_004969,NM_004523	chr10,chr10	-,+	IDE,KIF11	-16894,1841
chr3:36984549-36985165	chr3	+	36984710	36985214	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	1385,49626
chr4:16082067-16082858	chr4	+	16082237	16082653	True	NM_001145849,NM_001145848,NM_001145847,NM_001145850,NM_001145851,NM_001145852,NM_006017,NR_027696	chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4	-,-,-,-,-,-,-,+	PROM1,PROM1,PROM1,PROM1,PROM1,PROM1,PROM1,FLJ39653	-4496,3020,2991,-4496,-4496,-4496,-4496,145632
chr7:50183055-50184460	chr7	+	50183063	50184488	True	NM_007009,NM_001161834	chr7,chr7	-,+	ZPBP,C7orf72	-50203,-47433
chr7:150490642-150491208	chr7	+	150490697	150491023	True	NM_001101312,NM_001101311,NM_018487,NM_014020,NM_001101314	chr7,chr7,chr7,chr7,chr7	-,-,+,-,-	TMEM176B,TMEM176B,TMEM176A,TMEM176B,TMEM176B	6648,6648,6830,7475,6648
chr15:60770464-60770904	chr15	+	60770504	60770890	True	NM_012182,NM_001018089,NM_024611	chr15,chr15,chr15	+,-,-	FOXB1,NARG2,NARG2	-474134,504,504
chr16:77228646-77228853	chr16	+	77228666	77228900	True	NM_001129979,NM_014940,NM_199355	chr16,chr16,chr16	+,+,-	SYCE1L,MON1B,ADAMTS18	4448,-3881,240161
chrY:4976022-4976508	chrY	+	4976121	4976512	True	NM_032973,NR_001540	chrY,chrY	+,-	PCDH11Y,TTTY23	-52045,1135196
chrY:4976022-4976508	chrX	+	91141345	91141408	False	NM_001168363,NM_004538	chrX,chrX	+,-	PCDH11X,NAP1L3	-50945,1787333
chrX:48336702-48336943	chrX	+	48336780	48336866	True	NM_012280,NM_033518,NM_177439,NM_177434	chrX,chrX,chrX,chrX	+,-,+,+	FTSJ1,SLC38A5,FTSJ1,FTSJ1	-2282,-8136,-2282,-451
chr7:1607972-1608741	chr7	+	1607996	1608784	True	NR_021487,NR_027328,NM_032302,NM_001134340,NR_027329	chr7,chr7,chr7,chr7,chr7	+,+,-,-,+	KIAA1908,KIAA1908,PSMG3,PSMG3,KIAA1908	924,924,895,934,924
chr16:5007975-5008258	chr16	+	5008093	5008165	True	NM_014692,NM_002705	chr16,chr16	+,-	SEC14L5,PPL	152,-20957
chr12:81471309-81471604	chr12	+	81471391	81471611	True	NM_024560,NM_004664	chr12,chr12	+,-	ACSS3,LIN7A	197,-139697
chr16:82074655-82075319	chr16	+	82074727	82075359	True	NM_145168,NM_002153	chr16,chr16	-,+	SDR42E1,HSD17B2	-29634,-5920
chr17:1300986-1302647	chr17	+	1301216	1302685	True	NM_006761,NR_024058,NR_028514,NM_172367	chr17,chr17,chr17,chr17	-,-,+,+	YWHAE,YWHAE,LOC100306951,TUSC5	921,921,117527,-118310
chr2:216948377-216949988	chr2	+	216948416	216949672	True	NM_018441,NM_001142312,NM_138390,NM_001142310,NM_001142311	chr2,chr2,chr2,chr2,chr2	-,+,+,+,+	PECR,TMEM169,TMEM169,TMEM169,TMEM169	-1877,-1878,-1878,-1878,-1878
chr6:41165626-41166759	chr6	+	41165683	41166565	True	NM_024807,NM_198153	chr6,chr6	-,+	TREML2,TREML4	2410,29496
chr7:100271940-100272318	chr7	+	100271981	100272341	True	NM_005273,NM_022574	chr7,chr7	+,-	GNB2,GIGYF1	-669,14579
chr2:85980299-85980503	chr2	+	85980319	85980507	True	NM_198843,NM_032827	chr2,chr2	-,+	SFTPB,ATOH8	-84455,401
chr6:144012531-144013477	chr6	+	144012530	144013480	True	NM_001100165,NR_027113	chr6,chr6	+,-	PHACTR2,LOC285740	-13491,-122054
chr19:8118726-8119607	chr19	+	8118823	8119645	True	NM_005624,NM_001419,NM_001201359	chr19,chr19,chr19	+,-,+	CCL25,ELAVL1,CCL25	-1228,-48294,-1228
chr22:32341620-32342226	chr22	+	32341699	32342221	True	NM_015372,NM_003405	chr22,chr22	-,+	C22orf24,YWHAH	-363,-1271
chr11:22259027-22259399	chr11	+	22259141	22259400	True	NM_213599,NM_022725	chr11,chr11	+,-	ANO5,FANCF	-44480,388039
chr3:108835481-108836217	chr3	+	108835687	108836264	True	NM_014429,NR_033977	chr3,chr3	-,+	MORC1,FLJ22763	784,19296
chr5:70197391-70197848	chr5	+	70197426	70197813	True	NM_001178087,NM_022968,NM_004536,NM_021967,NM_022978	chr5,chr5,chr5,chr5,chr5	+,+,-,+,+	SERF1B,SERF1A,NAIP,SERF1A,SERF1B	-989,-995,123187,-995,-989
chr5:70197391-70197848	chr5	+	69322008	69322395	False	NM_001178087,NM_022968,NR_024054,NM_021967,NM_022978	chr5,chr5,chr5,chr5,chr5	+,+,-,+,+	SERF1B,SERF1A,LOC100170939,SERF1A,SERF1B	-989,-995,199286,-995,-989
chr3:121553995-121554253	chr3	+	121554084	121554176	True	NM_001023570,NM_001023571,NM_018456	chr3,chr3,chr3	-,-,+	IQCB1,IQCB1,EAF2	-158,-158,-101
chr19:54848912-54849435	chr19	+	54849111	54849465	True	NM_012276,NM_001005367	chr19,chr19	-,+	LILRA4,TTYH1	1006,77139
chr14:68142113-68142736	chr14	+	68142216	68142488	True	NM_006370,NM_152443	chr14,chr14	-,+	VTI1B,RDH12	-614,26114
chr19:3059789-3060166	chr19	+	3059795	3060021	True	NM_002067,NM_198970,NM_198969,NM_001130	chr19,chr19,chr19,chr19	+,-,-,-	GNA11,AES,AES,AES	34386,2400,2993,2400
chr9:99659958-99660259	chr9	+	99660066	99660304	True	NR_028350,NM_001001662	chr9,chr9	+,-	LOC441454,ZNF782	11052,-43677
chr9:99659958-99660259	chr9	-	97121916	97122111	False	NM_017561,NM_032558	chr9,chr9	-,+	FAM22F,HIATL1	-30990,14721
chr9:5516756-5517253	chr9	+	5516762	5517296	True	NM_025239,NM_018465	chr9,chr9	+,-	PDCD1LG2,C9orf46	-6268,-78902
chr1:39458086-39458581	chr1	+	39458151	39458556	True	NM_024595,NM_001136275,NM_017821	chr1,chr1,chr1	+,+,-	AKIRIN1,AKIRIN1,RHBDL2	-1287,-1287,-50695
chr10:50325904-50326286	chr10	+	50325922	50326226	True	NM_144984,NM_001135196,NM_001031746	chr10,chr10,chr10	-,+,-	C10orf72,C10orf71,C10orf72	-2363,180960,-2363
chr1:149378108-149379303	chr1	+	149378197	149379036	True	NR_027484,NM_001024599	chr1,chr1	+,-	FCGR1C,HIST2H2BF	-8957,20244
chr1:149378108-149379303	chr1	-	120926245	120926296	False	NM_001004340,NR_027337,NM_001017986	chr1,chr1,chr1	-,+,-	FCGR1B,HIST2H2BA,FCGR1B	9699,-20263,9699
chr1:149378108-149379303	chr1	+	149763913	149763964	False	NM_001161334,NM_000566	chr1,chr1	-,+	HIST2H2BF,FCGR1A	20015,-9715
chr20:589415-589856	chr20	+	589414	589774	True	NM_004609,NM_031229	chr20,chr20	-,+	TCF15,RBCK1	1186,-200756
chr11:7352018-7353011	chr11	+	7352464	7353058	True	NM_013249,NM_175733	chr11,chr11	-,+	ZNF214,SYT9	-310878,-79335
chr4:185722642-185723515	chr4	+	185722695	185723495	True	NR_003542,NM_152683	chr4,chr4	-,+	SLED1,CCDC111	-2495,-151993
chr22:38579219-38579944	chr22	+	38579519	38579690	True	NM_003560,NM_001004426,NM_001161572,NM_001199562	chr22,chr22,chr22,chr22	-,-,+,-	PLA2G6,PLA2G6,MAFF,PLA2G6	-1758,-1758,18248,-1683
chr10:101381360-101381796	chr10	+	101381457	101381757	True	NM_020354,NM_031212	chr10,chr10	+,-	ENTPD7,SLC25A28	37505,-1236
chr15:42265211-42265606	chr15	+	42265224	42265509	True	NM_139265,NM_001114633	chr15,chr15	-,+	EHD4,PLA2G4B	-469,-134264
chr2:182547066-182547387	chr2	+	182547070	182547378	True	NM_002500,NM_001130445	chr2,chr2	-,+	NEUROD1,SSFA2	-1678,209093
chr22:38379340-38379652	chr22	+	38379385	38379635	True	NM_006941,NM_021974	chr22,chr22	-,+	SOX10,POLR2F	954,-29762
chr17:75184402-75185869	chr17	+	75184441	75185527	True	NM_001144001,NR_036200	chr17,chr17	+,-	SEC14L1,MIR4316	-3205,207660
chr6:20530699-20531138	chr6	+	20530866	20530939	True	NM_017774,NM_001080480	chr6,chr6	+,-	CDKAL1,MBOAT1	3748,-318196
chr21:45662977-45663194	chr21	+	45663138	45663208	True	NM_000383,NM_015259	chr21,chr21	+,-	AIRE,ICOSLG	42554,-2304
chr7:75547702-75547928	chr7	+	75547722	75547966	True	NM_031925,NM_000941	chr7,chr7	-,+	TMEM120A,POR	76076,-3353
chr1:226372840-226373518	chr1	+	226372900	226373554	True	NM_022735,NM_031944	chr1,chr1	-,+	ACBD3,MIXL1	919,37828
chr10:90750379-90750679	chr10	+	90750383	90750649	True	NR_028035,NR_028034,NR_028036,NM_152872,NR_028033,NM_152871,NR_028371,NM_001141945,NM_000043	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,+,-,-,+	FAS,FAS,FAS,FAS,FAS,FAS,FAS-AS1,ACTA2,FAS	-146,-146,-146,-146,-146,-146,2133,548,-146
chr17:62942422-62943819	chr17	+	62942863	62943673	True	NR_026903,NM_199340,NM_001165933	chr17,chr17,chr17	-,-,+	AMZ2P1,LRRC37A3,RGS9	28088,-27960,189782
chr7:102104070-102104460	chr7	+	102104085	102104425	True	NM_017621,NM_152892	chr7,chr7	-,+	ALKBH4,LRWD1	946,964
chr6:26274245-26274615	chr6	+	26274287	26274662	True	NM_003525,NM_003534	chr6,chr6	+,-	HIST1H2BI,HIST1H3G	-1138,-2675
chr3:138667915-138668455	chr3	+	138668136	138668480	True	NM_001040061,NM_023067	chr3,chr3	+,-	C3orf72,FOXL2	-2111,-2154
chr13:34421197-34422699	chr13	+	34421618	34422725	True	NM_181558,NM_178006	chr13,chr13	+,-	RFC3,STARD13	-29474,-561717
chr17:73200255-73200733	chr17	+	73200255	73200607	True	NM_001005849,NM_024844	chr17,chr17	-,+	SUMO2,NUP85	-21157,989
chr9:35752265-35752899	chr9	+	35752397	35752947	True	NM_020944,NM_001080496,NM_001044264	chr9,chr9,chr9	-,+,-	GBA2,RGP1,MSMP	-3172,-3179,1377
chr12:6796470-6798136	chr12	+	6796661	6797640	True	NM_001039917,NM_001039916,NM_001039920,NM_001135734,NM_001039919,NM_001039918,NM_133476,NM_001164094	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,-,-,-,-,-,-,+	ZNF384,ZNF384,ZNF384,ZNF384,ZNF384,ZNF384,ZNF384,COPS7A	1080,236,1080,1087,1080,938,938,35509
chr20:47441842-47443009	chr20	+	47441889	47442867	True	NM_006420,NM_020820	chr20,chr20	+,-	ARFGEF2,PREX1	95407,1603
chr22:41813290-41815009	chr22	+	41813599	41814641	True	NM_016272,NM_003216	chr22,chr22	-,+	TOB2,TEF	28436,-35687
chr8:27493845-27494239	chr8	+	27493977	27494229	True	NM_016240,NM_001831,NM_182826	chr8,chr8,chr8	+,-,+	SCARA3,CLU,SCARA3	-2460,-21650,-2460
chr16:15188506-15188853	chr16	+	15188536	15188674	True	NM_018427,NM_015027	chr16,chr16	-,+	RRN3,PDXDC1	-378,-119754
chr16:11375059-11375451	chr16	+	11375265	11375491	True	NM_021247,NM_152308,NM_002761,NM_002762	chr16,chr16,chr16,chr16	-,+,-,-	PRM3,C16orf75,PRM1,PRM2	-7813,63819,-73,-4928
chr7:140301824-140302077	chr7	+	140301885	140302081	True	NM_015689,NM_052853	chr7,chr7	-,+	DENND2A,ADCK2	311,70871
chr15:55566173-55567544	chr15	+	55566302	55567181	True	NM_004855,NM_004580,NM_183236,NM_183234	chr15,chr15,chr15,chr15	+,-,-,-	PIGB,RAB27A,RAB27A,RAB27A	43951,-3717,-3195,-3818
chr14:59933819-59934478	chr14	+	59933953	59934533	True	NM_022571,NM_001098625	chr14,chr14	-,+	GPR135,JKAMP	-1894,16627
chr1:90460443-90460648	chr1	+	90460519	90460637	True	NM_182976,NM_182975,NR_002830	chr1,chr1,chr1	+,+,-	ZNF326,ZNF326,GEMIN8P4	40,40,0
chr3:183994566-183994924	chr3	+	183994578	183994918	True	NM_033259,NM_001100121,NM_001100120,NM_001037324	chr3,chr3,chr3,chr3	-,+,+,+	CAMK2N2,ECE2,ECE2,ECE2	-15327,-830,-830,-830
chr8:7172481-7172809	chr8	+	7172582	7172662	True	NR_027000,NR_003668	chr8,chr8	-,+	LOC349196,DEFB109P1B	-28702,-2265
chr8:7172481-7172809	chr8	-	7852748	7852828	False	NR_027424,NR_003668	chr8,chr8	+,-	FAM66E,DEFB109P1B	-40264,2265
chr1:16369921-16370196	chr1	+	16370185	16370245	True	NM_014424,NM_001165945,NM_000085	chr1,chr1,chr1	-,+,+	HSPB7,CLCNKB,CLCNKB	-24900,5038,1
chr1:171700392-171702317	chr1	+	171700572	171701937	True	NM_001007239,NM_003762,NR_033704,NM_001185127	chr1,chr1,chr1,chr1	+,-,-,-	METTL13,VAMP4,VAMP4,VAMP4	48823,9496,9496,9496
chr7:63582348-63582784	chr7	+	63582497	63582583	True	NM_178558,NM_001159522	chr7,chr7	-,+	ZNF680,ZNF727	440972,-76727
chr21:44858190-44859375	chr21	+	44858249	44859372	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	10531,-11247
chr5:94890554-94890950	chr5	+	94890577	94890877	True	NM_014639,NM_198150	chr5,chr5	-,+	TTC37,ARSK	-18,-13
chr12:5297442-5298352	chr12	+	5297543	5298376	True	NM_006422,NM_002234	chr12,chr12	-,+	AKAP3,KCNA5	-543200,-144509
chr19:56654228-56655397	chr19	+	56654506	56655298	True	NM_001002836,NM_018337	chr19,chr19	-,+	ZNF787,ZNF444	-21857,-2001
chr7:155436136-155436378	chr7	+	155436143	155436301	True	NM_001103176,NM_053043	chr7,chr7	-,+	CNPY1,RBM33	-109604,901
chr1:23040264-23040482	chr1	+	23040401	23040529	True	NR_036214,NM_017449,NM_004442	chr1,chr1,chr1	-,+,+	MIR4253,EPHB2,EPHB2	149240,-3121,-3121
chr2:109606928-109608008	chr2	+	109607102	109608017	True	NM_022336,NM_001099289	chr2,chr2	-,+	EDAR,SH3RF3	-1274,137979
chr6:36370603-36370843	chr6	+	36370617	36370695	True	NM_016135,NM_173562	chr6,chr6	-,+	ETV7,KCTD20	-15150,39848
chr14:101195352-101195704	chr14	+	101195393	101195721	True	NM_003836,NM_001134888	chr14,chr14	+,-	DLK1,RTL1	-2242,155513
chr4:76552748-76553390	chr4	+	76552784	76553271	True	NM_003948,NM_178497	chr4,chr4	-,+	CDKL2,C4orf26	2503,-71586
chr2:39099143-39101037	chr2	+	39099172	39101081	True	NM_001145450,NM_198963	chr2,chr2	+,-	MORN2,DHX57	2021,1998
chr10:134603087-134603363	chr10	+	134603218	134603304	True	NM_005539,NM_177400	chr10,chr10	+,-	INPP5A,NKX6-2	-251916,-3681
chr17:43972331-43972641	chr17_ctg5_hap1	-	895002	895206	False	NM_016835,NM_016834,NM_005910,NR_024559,NM_001123067,NM_001123066,NM_016841,NR_024560,NM_001203251,NM_001203252	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	-,-,-,+,-,-,-,-,-,-	MAPT,MAPT,MAPT,LOC100128977,MAPT,MAPT,MAPT,LOC100130148,MAPT,MAPT	674,674,674,-359,674,674,674,-578,674,674
chr17:43972331-43972641	chr17	+	43972372	43972570	True	NM_016835,NM_016834,NM_005910,NR_024559,NM_001123067,NM_001123066,NM_016841,NR_024560,NM_001203251,NM_001203252	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,-,+,+,+,+,+,+	MAPT,MAPT,MAPT,LOC100128977,MAPT,MAPT,MAPT,LOC100130148,MAPT,MAPT	-675,-675,-675,359,-675,-675,-675,578,-675,-675
chr12:52683179-52684822	chr12	+	52683204	52684700	True	NM_002284,NM_002281	chr12,chr12	+,-	KRT86,KRT81	10948,649
chr12:52683179-52684822	chr12	-	52696249	52697749	False	NM_002284,NM_002281	chr12,chr12	+,-	KRT86,KRT81	-651,-10950
chr4:42151861-42152765	chr4	+	42152003	42152800	True	NM_207406,NM_006345,NM_001159547	chr4,chr4,chr4	-,+,-	BEND4,SLC30A9,BEND4	2145,-159537,2145
chr1:167922928-167923781	chr1	+	167923154	167923617	True	NM_018442,NM_015415	chr1,chr1	+,-	DCAF6,BRP44	-17419,-16847
chr17:79793586-79793978	chr17	+	79793828	79793948	True	NM_001007533,NM_000160,NM_001093767,NM_207368	chr17,chr17,chr17,chr17	-,+,-,-	DYSFIP1,GCGR,FAM195B,FAM195B	-902,-31869,-2661,-2661
chr19:7698854-7700436	chr19	+	7698983	7700257	True	NM_006949,NR_033242,NM_020196,NM_174895,NM_001127396,NM_001171155	chr19,chr19,chr19,chr19,chr19,chr19	+,+,-,-,+,+	STXBP2,LOC100131801,XAB2,PCP2,STXBP2,LOC100131801	1733,-4363,-4544,-413,1733,-4363
chr5:43340230-43341068	chr5	+	43340447	43340815	True	NM_153361,NM_002130	chr5,chr5	+,-	MGC42105,HMGCS1	-148183,-26852
chr8:127776211-127777276	chr8	+	127776235	127777319	True	NM_001159542,NM_174911	chr8,chr8	+,-	POU5F1B,FAM84B	650537,-205524
chr1:53104767-53105279	chr1	+	53104859	53105001	True	NM_023077,NM_001042693	chr1,chr1	-,+	SELRC1,FAM159A	59087,-5851
chr2:95961701-95963023	chr2	+	95961792	95962633	True	NM_013434,NM_032788	chr2,chr2	+,-	KCNIP3,ZNF514	438,-136529
chr12:7341340-7341664	chr12	+	7341384	7341696	True	NM_000319,NM_031491,NM_001131026,NM_001131024,NM_001131025,NM_001131023	chr12,chr12,chr12,chr12,chr12,chr12	+,-,+,+,+,+	PEX5,RBP5,PEX5,PEX5,PEX5,PEX5	1261,-59918,62,585,585,585
chr21:34398771-34398980	chr21	+	34398783	34398949	True	NR_024102,NM_005806	chr21,chr21	-,+	C21orf54,OLIG2	143642,-595
chr2:204391302-204392377	chr2	+	204391793	204392260	True	NM_203365,NM_213589,NM_006139	chr2,chr2,chr2	-,-,+	RAPH1,RAPH1,CD28	7857,7857,178937
chr1:158151536-158153429	chr1	+	158151660	158153464	True	NR_033946,NM_001766	chr1,chr1	-,+	LOC646268,CD1D	-41230,-1974
chrX:85339992-85340821	chrX	+	85340031	85340577	True	NM_001145414,NM_001139514	chrX,chrX	-,+	CHM,DACH2	-37465,62877
chr17:21903453-21903814	chr17	+	21903551	21903679	True	NM_001113434,NR_027084	chr17,chr17	-,+	C17orf51,FLJ36000	-448610,382
chr17:21903453-21903814	chr17	+	21903260	21903318	False	NM_001113434,NR_027084	chr17,chr17	-,+	C17orf51,FLJ36000	-448319,743
chr17:21903453-21903814	chr17	+	21905973	21906031	False	NM_001113434,NR_027084	chr17,chr17	-,+	C17orf51,FLJ36000	-451032,-1962
chr5:135469350-135469576	chr5	+	135469349	135469613	True	NM_001001420,NR_026763,NM_005903,NM_001001419	chr5,chr5,chr5,chr5	+,-,+,+	SMAD5,SMAD5OS,SMAD5,SMAD5	-866,1016,-866,-866
chr20:58632595-58633421	chr20	+	58632674	58633190	True	NM_173644,NM_006242	chr20,chr20	+,-	C20orf197,PPP1R3D	-1745,-117322
chr12:70189850-70191063	chr12	+	70190416	70191110	True	NM_001024647,NM_032735	chr12,chr12	+,-	RAB3IP,BEST3	-17721,-97220
chr3:20210225-20211744	chr3	+	20210547	20211390	True	NM_003884,NM_001012410	chr3,chr3	+,-	KAT2B,SGOL1	-129081,16363
chr16:28223515-28224462	chr16	+	28223566	28224304	True	NM_015171,NM_001024401	chr16,chr16	-,+	XPO6,SBK1	-376,79535
chr1:112282219-112282557	chr1	+	112282269	112282523	True	NM_019099,NM_007204	chr1,chr1	-,+	C1orf183,DDX20	-223,15666
chr14:21945191-21945488	chr14	+	21945203	21945501	True	NM_032846,NM_001163380,NM_014828,NR_028074	chr14,chr14,chr14,chr14	-,-,+,-	RAB2B,RAB2B,TOX4,RAB2B	-71,-371,-53,-71
chr7:99011512-99011921	chr7	+	99011594	99011698	True	NM_003910,NM_014891	chr7,chr7	+,-	BUD31,PDAP1	-5045,-5289
chr5:176514651-176515144	chr5	+	176514711	176514989	True	NM_213647,NM_022963,NM_001199298,NM_002011	chr5,chr5,chr5,chr5	+,+,-,+	FGFR4,FGFR4,UIMC1,FGFR4	-841,1561,-80916,-841
chr1:33351535-33351765	chr1	+	33351588	33351814	True	NM_001171941,NM_002143	chr1,chr1	-,+	FNDC5,HPCA	-13506,283
chr15:75931322-75932395	chr15	+	75931543	75931990	True	NM_153271,NM_018285	chr15,chr15	+,-	SNX33,IMP3	9357,724
chr9:31920435-31921149	chr9	+	31920724	31921002	True	NM_014314,NM_002197	chr9,chr9	-,+	DDX58,ACO1	605370,463598
chr14:81863256-81863570	chr14	+	81863546	81863616	True	NM_033104,NM_000369	chr14,chr14	-,+	STON2,TSHR	1361,-441728
chr17:60486877-60487482	chr17	+	60487020	60487290	True	NR_027486,NM_181725	chr17,chr17	-,+	TBC1D3P2,METTL2A	-134004,13955
chr2:97407416-97408990	chr2	+	97407627	97408811	True	NM_020184,NR_024518,NR_024519,NM_001142292,NR_024521,NR_024520,NM_030805	chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-,-	CNNM4,LMAN2L,LMAN2L,LMAN2L,LMAN2L,LMAN2L,LMAN2L	17827,-1814,-1814,-1814,-1814,-1814,-1814
chr2:70473872-70474745	chr2	+	70474138	70474763	True	NM_016297,NM_022173,NM_022037	chr2,chr2,chr2	+,-,-	PCYOX1,TIA1,TIA1	10467,1066,1066
chr12:114398447-114398986	chr12	+	114398545	114398737	True	NM_016196,NM_001146699,NM_001146698,NM_138432	chr12,chr12,chr12,chr12	-,-,-,+	RBM19,RBM19,RBM19,SDSL	5489,5489,5489,-538380
chr2:136287237-136287517	chr2	+	136287370	136287519	True	NM_015361,NM_032143	chr2,chr2	+,-	R3HDM1,ZRANB3	1563,1338
chr2:26203571-26203814	chr2	+	26203608	26203850	True	NM_002254,NM_016131	chr2,chr2	-,+	KIF3C,RAB10	1643,52878
chr2:209272055-209272607	chr2	+	209272248	209272618	True	NM_005896,NM_005048	chr2,chr2	-,+	IDH1,PTH2R	-152442,-758
chr1:160160577-160160866	chr1	+	160160655	160160760	True	NM_001231,NR_028106	chr1,chr1	+,-	CASQ1,DCAF8	-421,71568
chr5:10250438-10250657	chr5	+	10250467	10250573	True	NM_199133,NM_012073	chr5,chr5	-,+	FAM173B,CCT5	-453,-236
chr20:30101595-30102031	chr20	+	30101809	30102019	True	NM_001037500,NM_178582,NM_178580,NM_030789,NM_178581	chr20,chr20,chr20,chr20,chr20	-,+,+,+,+	DEFB124,HM13,HM13,HM13,HM13	-40993,221,221,221,221
chr12:863268-863708	chr12	+	863369	863749	True	NM_001184985,NM_016533,NM_018979,NM_213655,NM_014823	chr12,chr12,chr12,chr12,chr12	+,-,+,+,+	WNK1,NINJ2,WNK1,WNK1,WNK1	-1331,-90614,-1331,-1331,-1331
chr20:42968753-42969136	chr20	+	42969015	42969159	True	NM_178491,NM_001080472	chr20,chr20	+,-	R3HDML,FITM2	-3449,-29126
chr5:139421863-139422144	chr5	+	139421948	139422192	True	NM_001184935,NM_013982,NM_013983,NM_013981,NM_004883,NM_005859	chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,-,+	NRG2,NRG2,NRG2,NRG2,NRG2,PURA	742,742,742,742,742,71515
chr2:225454713-225455029	chr2	+	225454712	225454873	True	NM_022915,NM_003590	chr2,chr2	+,-	MRPL44,CUL3	-632647,-4602
chr19:49248247-49248790	chr19	+	49248262	49248748	True	NM_019113,NM_000148,NM_017805,NM_182575	chr19,chr19,chr19,chr19	+,-,-,-	FGF21,FUT1,RASIP1,IZUMO1	10595,9949,-4292,1468
chr8:54777085-54777791	chr8	+	54777143	54777753	True	NM_170587,NM_213619	chr8,chr8	+,-	RGS20,ATP6V1H	-12826,-21293
chr22:35846805-35847040	chr22	+	35846820	35847050	True	NM_005368,NM_006739	chr22,chr22	-,+	MB,MCM5	166384,-50755
chr11:67204665-67204880	chr11	+	67204687	67204863	True	NM_020441,NM_001018070,NM_003952,NM_005608	chr11,chr11,chr11,chr11	-,-,+,-	CORO1B,CORO1B,RPS6KB2,PTPRCAP	6170,6450,-8803,340
chr19:13903787-13904207	chr19	+	13903792	13903854	True	NR_036515,NM_023072	chr19,chr19	-,+	LOC284454,ZSWIM4	43299,2419
chr11:63998972-63999912	chr11	+	63999130	63999694	True	NM_031472,NM_057092,NM_001160389,NM_001033678,NM_032344,NM_005528,NM_004470,NM_003377,NM_001160392,NM_001160393,NM_001160390,NM_001128613,NM_001128612,NM_001135208	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,+,-,-,+,+,+,+,-,-,-,+,+,+	TRPT1,FKBP2,TRPT1,TRPT1,NUDT22,DNAJC4,FKBP2,VEGFB,TRPT1,TRPT1,TRPT1,NUDT22,NUDT22,FKBP2	-5404,9893,-5404,-5404,-5444,-1429,8718,2571,-5404,-5789,-5404,-5444,-5444,8909
chr15:49848786-49849941	chr15	+	49848790	49849965	True	NM_152647,NM_001144955	chr15,chr15	-,+	C15orf33,DTWD1	63204,63260
chr5:43043089-43043429	chr5	+	43043128	43043426	True	NM_001014279,NR_015447	chr5,chr5	-,+	C5orf39,LOC153684	-2681,-943
chr9:133884709-133885260	chr9	+	133884712	133885100	True	NM_001145106,NM_006059	chr9,chr9	-,+	FIBCD1,LAMC3	-70257,-259
chr4:40633549-40634682	chr4	+	40633548	40634313	True	NM_001098634,NM_024677	chr4,chr4	-,+	RBM47,NSUN7	-1665,117600
chr16:56667619-56668844	chr16	+	56668019	56668583	True	NR_003658,NR_036677,NM_176870,NM_175617,NM_005946,NM_005950,NR_027781	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,-,+	MT1DP,MT1JP,MT1M,MT1E,MT1A,MT1G,MT1DP	9132,1067,-1536,-8485,3994,33444,9015
chr17:79991464-79991678	chr17	+	79991556	79991666	True	NM_016286,NM_005052,NM_001195218	chr17,chr17,chr17	-,+,-	DCXR,RAC3,DCXR	3957,-2075,3957
chr19:55311604-55313352	chr19	+	55311651	55313182	True	NM_001080770,NM_001080772,NM_001127255,NM_002255	chr19,chr19,chr19,chr19	+,+,-,+	KIR2DL4,KIR2DL4,NLRP7,KIR2DL4	1884,1884,145752,1884
chr11:102669911-102670190	chr11	+	102669967	102670239	True	NM_001080463,NM_002421,NM_001145938	chr11,chr11,chr11	+,-,-	DYNC2H1,MMP1,MMP1	309920,-1001,-1001
chr7:20379573-20381332	chr7	+	20379740	20381104	True	NM_182762,NM_002214	chr7,chr7	-,+	MACC1,ITGB8	-122727,-9066
chr5:79646997-79647580	chr5	+	79647067	79647601	True	NR_003665,NM_032567	chr5,chr5	-,+	CRSP8P,SPZ1	234,-31341
chr5:79646997-79647580	chr9	+	134759459	134769307	False	NM_032536,NM_005312	chr9,chr9	+,-	NTNG2,RAPGEF1	268026,-146534
chr5:79646997-79647580	chr9	+	134889830	134952855	False	NM_032536,NM_004269	chr9,chr9	+,-	NTNG2,MED27	84478,65423
chr5:157002920-157003163	chr5	+	157003077	157003161	True	NM_001145132,NM_033274	chr5,chr5	+,-	C5orf52,ADAM19	95399,-294
chr3:112714542-112715034	chr3	+	112714737	112715049	True	NM_138940,NM_138485,NM_014170	chr3,chr3,chr3	-,+,+	CD200R1,GTPBP8,GTPBP8	-20800,-5000,-5000
chr20:38590996-38592424	chr20	+	38590996	38592409	True	NR_033905,NM_005461	chr20,chr20	+,-	DHX35,MAFB	-1000066,725517
chr14:24867489-24867729	chr14	+	24867510	24867720	True	NM_001039771,NM_025081	chr14,chr14	-,+	CBLN3,NYNRIN	31061,271
chr15:40328829-40329087	chr15	+	40328851	40329123	True	NM_001013703,NM_003134	chr15,chr15	+,-	EIF2AK4,SRP14	-102555,2316
chr1:160766565-160766935	chr1	+	160766567	160766919	True	NM_002348,NM_001166663,NM_001033667	chr1,chr1,chr1	+,-,+	LY9,CD244,LY9	-691,65823,-691
chrX:106865066-106866958	chrX	+	106865070	106866546	True	NM_002764,NM_001015881,NM_001204402	chrX,chrX,chrX	+,-,+	PRPS1,TSC22D3,PRPS1	5107,93215,5107
chr2:58688421-58688823	chr5	-	140033616	140034129	False	NM_002488,NR_037428,NM_006083,NR_033697,NM_001185012	chr5,chr5,chr5,chr5,chr5	-,+,+,-,-	NDUFA2,MIR3655,IK,NDUFA2,NDUFA2	-6246,-6701,-6746,-6246,-6246
chr2:58688421-58688823	chr2	+	58688427	58688786	True	NR_033873,NM_018062	chr2,chr2	+,-	FLJ30838,FANCL	59101,-219912
chr22:32649403-32649625	chr22	+	32649515	32649668	True	NM_014227,NM_006604	chr22,chr22	-,+	SLC5A4,RFPL3	1703,101203
chr16:71929649-71929872	chr16	+	71929709	71929921	True	NM_014761,NM_001201556	chr16,chr16	+,-	KIAA0174,ZNF821	-314,-11616
chr20:61052536-61052830	chr20	+	61052662	61052760	True	NM_001024,NM_080473	chr20,chr20	+,-	RPS21,GATA5	-90592,-1636
chr4:70728975-70730181	chr4	+	70729149	70729901	True	NM_005420,NM_001025104	chr4,chr4	-,+	SULT1E1,CSN1S1	-3279,66897
chr17:13973913-13974920	chr17	+	13974018	13974869	True	NM_001007530,NM_001303	chr17,chr17	-,+	CDRT15,COX10	165334,-1361
chr19:10655122-10655337	chr19	+	10655241	10655313	True	NM_023008,NR_031603,NM_032885	chr19,chr19,chr19	-,+,+	KRI1,MIR1238,ATG4D	21439,7484,-651
chr15:58279798-58281086	chr15	+	58280139	58281015	True	NM_020980,NM_170697	chr15,chr15	+,-	AQP9,ALDH1A2	149392,25270
chr12:52889171-52889985	chr12	+	52889203	52890015	True	NM_002284,NM_005554	chr12,chr12	+,-	KRT86,KRT6A	-193605,-2022
chrX:114938890-114939679	chrX	+	114938900	114939544	True	NM_020871,NM_001172335	chrX,chrX	-,+	LRCH2,PLS3	-470265,-111137
chr15:69236871-69238194	chr15	+	69237022	69238211	True	NR_033671,NM_006305	chr15,chr15	+,-	NOX5,ANP32A	-14217,-123761
chr2:110961220-110962592	chr2	+	110961553	110962203	True	NM_207181,NM_001128178,NM_001128179,NR_037626,NM_000272	chr2,chr2,chr2,chr2,chr2	-,-,-,+,-	NPHP1,NPHP1,NPHP1,LOC100507334,NPHP1	486,486,486,41011,486
chr20:31643724-31644414	chr20	+	31643735	31644351	True	NM_182658,NM_080675	chr20,chr20	+,-	C20orf185,SUN5	-556,-51496
chr11:67419896-67420468	chr11	+	67420031	67420431	True	NM_007103,NM_080658	chr11,chr11	+,-	NDUFV1,ACY3	-45759,-1901
chr11:118438213-118439189	chr11	+	118438454	118438897	True	NM_020153,NM_001142281,NM_001168618,NM_001655	chr11,chr11,chr11,chr11	-,+,-,+	IFT46,ARCN1,IFT46,ARCN1	-1663,4204,-1663,4204
chr9:140146223-140146616	chr9	+	140146305	140146463	True	NM_001004353,NM_015456,NM_001001710	chr9,chr9,chr9	+,+,-	C9orf173,COBRA1,FAM166A	-626,3295,-4083
chr3:149196229-149197595	chr3	+	149196275	149197502	True	NM_004617,NM_014220	chr3,chr3	+,-	TM4SF4,TM4SF1	-3961,-100707
chr3:126291694-126292450	chr3	+	126291876	126292404	True	NM_152533,NM_152889	chr3,chr3	-,+	C3orf22,CHST13	-14118,-48762
chr13:46960219-46960714	chr13	+	46960229	46960643	True	NM_001164211,NM_025113	chr13,chr13	+,-	LRCH1,C13orf18	166652,1042
chr19:49865741-49866059	chr19	+	49865974	49866036	True	NM_014419,NM_003598,NM_001197302,NM_001197301	chr19,chr19,chr19,chr19	+,-,+,+	DKKL1,TEAD2,DKKL1,DKKL1	1005,-260,950,1005
chr10:736363-736739	chr10	+	736488	736626	True	NR_027152,NM_014974	chr10,chr10	+,-	C10orf108,DIP2C	-40522,-880
chr7:102565369-102566310	chr7	+	102565369	102566086	True	NM_145032,NM_005824	chr7,chr7	-,+	FBXL13,LRRC17	148979,-12081
chr4:83928215-83929523	chr4	+	83928379	83929495	True	NM_194282,NM_001115008,NM_001115007,NM_016129	chr4,chr4,chr4,chr4	-,-,-,+	LIN54,LIN54,LIN54,COPS4	2547,2547,4605,26743
chr10:73155970-73156200	chr10	+	73155976	73156196	True	NM_001164375,NM_001171930,NM_001171931,NM_001171932,NM_022124,NM_052836	chr10,chr10,chr10,chr10,chr10,chr10	-,+,+,+,+,+	C10orf105,CDH23,CDH23,CDH23,CDH23,CDH23	323432,494,494,494,494,494
chr21:47649475-47649727	chr21	+	47649560	47649746	True	NM_001145436,NM_002340,NR_002776,NM_001001438,NM_001145437	chr21,chr21,chr21,chr21,chr21	-,-,+,-,-	LSS,LSS,MCM3AP-AS1,LSS,LSS	-822,-822,-453,-822,-822
chr19:7005234-7005545	chr19	+	7005255	7005437	True	NR_024372,NM_001136507	chr19,chr19	-,+	FLJ25758,MBD3L5	1039,25156
chrX:19502261-19502733	chrX	+	19502589	19502777	True	NM_001173456,NM_001001671	chrX,chrX	+,-	PDHA1,MAP3K15	-140636,30652
chr8:145730650-145730869	chr8	+	145730726	145730864	True	NM_032902,NM_005309,NM_004260,NM_138431	chr8,chr8,chr8,chr8	+,+,-,+	PPP1R16A,GPT,RECQL4,MFSD3	-8668,-1312,12396,3687
chr9:74627356-74629271	chr9	+	74627357	74629165	True	NM_182505,NM_001128618	chr9,chr9	+,-	C9orf85,C9orf57	-100986,46406
chr2:176985590-176985982	chr2	+	176985589	176985970	True	NM_002148,NM_019558,NM_014213,NM_001080458,NM_001199747,NM_001199746	chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,-,+,+	HOXD10,HOXD8,HOXD9,EVX2,HOXD8,HOXD8	-4148,8497,1442,-36899,8451,8497
chr4:79704814-79706559	chr4	+	79705032	79706223	True	NM_198892,NM_017593,NM_001040202	chr4,chr4,chr4	+,+,-	BMP2K,BMP2K,PAQR3	-7558,-7558,154420
chr15:91413477-91413719	chr15	+	91413478	91413757	True	NM_198527,NM_002569	chr15,chr15	-,+	HDDC3,FURIN	62067,-1652
chr3:186332860-186333480	chr3	+	186333016	186333432	True	NM_001622,NM_001134415	chr3,chr3	+,-	AHSG,TBCCD1	-2225,-44684
chr19:50707182-50707871	chr19	+	50707215	50707774	True	NM_024729,NM_001145809,NM_001077186,NM_152358	chr19,chr19,chr19,chr19	+,+,+,-	MYH14,MYH14,MYH14,IZUMO2	-381,-381,-381,-40677
chr10:73636732-73638130	chr10	+	73636934	73638102	True	NM_001171936,NM_002778	chr10,chr10	+,-	CDH23,PSAP	-65345,-25852
chr18:47918562-47919145	chr18	+	47918587	47918672	True	NM_145060,NM_014593	chr18,chr18	+,-	SKA1,CXXC1	-17251,-103895
chrX:43545081-43545766	chrX	+	43545088	43545652	True	NM_000898,NM_000240	chrX,chrX	-,+	MAOB,MAOA	196119,-29731
chr2:211023934-211024495	chr2	+	211023937	211024390	True	NM_152519,NM_199229	chr2,chr2	-,+	C2orf67,RPE	11716,-156607
chr1:86954877-86955107	chr1	+	86954929	86955129	True	NM_001285,NM_020729	chr1,chr1	+,-	CLCA1,ODF2L	-20454,-92904
chr12:51270307-51271686	chr12	+	51270795	51271304	True	NM_182559,NM_001174130	chr12,chr12	+,-	TMPRSS12,SLC11A2	-34145,131803
chr9:127910024-127912011	chr9	+	127910099	127912004	True	NM_001144877,NM_001174152,NM_173690	chr9,chr9,chr9	-,+,-	SCAI,RABEPK,SCAI	-4261,50816,-4261
chr3:190041213-190041972	chr3	+	190041257	190041914	True	NM_021101,NM_006580	chr3,chr3	-,+	CLDN1,CLDN16	-1022,63746
chr5:79702655-79703080	chr5	+	79702656	79703125	True	NR_003665,NM_014733,NM_001105251	chr5,chr5,chr5	-,+,+	CRSP8P,ZFYVE16,ZFYVE16	-54871,712,712
chr10:103910667-103911423	chr10	+	103911206	103911454	True	NM_001113407,NM_004741	chr10,chr10	-,+	LDB1,NOLC1	-30996,478
chr14:106938015-106938221	chr14	+	106938018	106938104	True	NR_002224	chr14	-	ADAM6	-499660
chr14:106938015-106938221	chr14	+	106856996	106857047	False	NR_002224,NR_027457	chr14,chr14	-,+	ADAM6,NCRNA00221	-418638,81407
chr20:18777349-18777977	chr20	+	18777376	18778009	True	NR_026883,NR_026884,NR_026885	chr20,chr20,chr20	-,-,+	HSPC072,HSPC072,LOC100270804	-2148,-2750,-2741
chr2:944049-945792	chr2	+	944099	945664	True	NM_018968,NR_033880	chr2,chr2	+,-	SNTG2,LOC339822	889,-79987
chr19:34662944-34663181	chr19	+	34662949	34663129	True	NM_001114093,NM_015578,NR_027620	chr19,chr19,chr19	+,+,-	LSM14A,LSM14A,LOC643719	222,222,405517
chr1:94703311-94703707	chr1	+	94703381	94703559	True	NM_004815,NM_001122674	chr1,chr1	-,+	ARHGAP29,ABCD3	-74,180373
chr1:204164173-204165601	chr1	+	204164663	204165341	True	NM_005686,NM_002256	chr1,chr1	+,-	SOX13,KISS1	-122468,328
chr13:40224860-40225979	chr13	+	40224923	40225090	True	NM_020751,NM_001145079,NR_026745,NR_036190	chr13,chr13,chr13,chr13	+,+,+,-	COG6,COG6,COG6,MIR4305	4673,4673,4673,13239
chr19:54785722-54786793	chr19	+	54785827	54786636	True	NM_001013,NM_005874,NM_001080978	chr19,chr19,chr19	+,-,-	RPS9,LILRB2,LILRB2	-81152,-794,-794
chr18:802722-804533	chr18	+	803364	804289	True	NM_001099733,NM_005433	chr18,chr18	+,-	ADCYAP1,YES1	100654,8099
chr10:112683175-112684018	chr10	+	112683250	112684061	True	NM_007373,NM_001195305,NM_001195304,NM_001195307,NM_001195306,NR_024141	chr10,chr10,chr10,chr10,chr10,chr10	+,-,-,-,-,-	SHOC2,BBIP1,BBIP1,BBIP1,BBIP1,BBIP1	-4014,-4126,-4126,-4126,-4556,-4126
chr11:72503253-72504813	chr11	+	72503526	72504715	True	NM_033388,NM_006645	chr11,chr11	+,-	ATG16L2,STARD10	20735,86
chr16:27280170-27280389	chr16	+	27280204	27280388	True	NM_145080,NR_037184	chr16,chr16	-,+	NSMCE1,FLJ21408	-91,-729
chr2:175241245-175242475	chr2	+	175241560	175242214	True	NM_004882,NM_001193528	chr2,chr2	-,+	CIR1,SCRN3	18280,18242
chr18:44139516-44140054	chr18	+	44139538	44140102	True	NM_152470,NM_001145472	chr18,chr18	+,-	RNF165,LOXHD1	-225402,-268
chr6:160905125-160906028	chr6	+	160905202	160905952	True	NR_028093,NM_021977	chr6,chr6	-,+	LPAL2,SLC22A3	26254,-135828
chr20:3686080-3686457	chr20	+	3686272	3686442	True	NM_001197327,NM_023068	chr20,chr20	+,-	HSPA12B,SIGLEC1	26874,1383
chr3:19971055-19972510	chr3	+	19971381	19972035	True	NM_144715,NM_004162	chr3,chr3	-,+	EFHB,RAB5A	3733,16536
chr11:2985070-2986868	chr11	+	2985074	2986576	True	NM_002555,NR_002982	chr11,chr11	+,-	SLC22A18,SNORA54	-61613,49
chr12:52685181-52685422	chr12	+	52685206	52685454	True	NM_002284,NM_002281	chr12,chr12	+,-	KRT86,KRT81	10194,1
chr19:52872470-52872725	chr19	+	52872632	52872745	True	NM_001102657,NM_001145434	chr19,chr19	-,+	ZNF836,ZNF880	-197736,424
chr5:172484375-172485577	chr5	+	172484661	172485395	True	NM_001168393,NR_026682,NM_001168394,NM_153607	chr5,chr5,chr5,chr5	+,-,+,+	C5orf41,LOC100268168,C5orf41,C5orf41	-1363,-98290,-1363,-1363
chr20:56285763-56286419	chr20	+	56285922	56286418	True	NM_020182,NM_199169,NM_002591,NM_199170,NM_199171	chr20,chr20,chr20,chr20,chr20	-,-,+,-,-	PMEPA1,PMEPA1,PCK1,PMEPA1,PMEPA1	-891,-297,-149840,-297,174
chr19:15345135-15345471	chr19	+	15345400	15345471	True	NM_033025,NM_001142886,NM_024794	chr19,chr19,chr19	+,-,-	SYDE1,EPHX3,EPHX3	-127238,-1542,-2169
chr8:25901189-25901420	chr8	+	25901203	25901469	True	NM_002717,NM_022659	chr8,chr8	+,-	PPP2R2A,EBF2	247537,973
chr19:58951130-58951400	chr19	+	58951222	58951432	True	NM_207395,NM_003433	chr19,chr19	+,-	ZNF324B,ZNF132	11538,207
chr6:134210542-134210973	chr6	+	134210576	134210992	True	NM_003206,NM_145176,NM_198392	chr6,chr6,chr6	+,-,+	TCF21,SLC2A12,TCF21	-369,162847,-370
chr16:69386880-69387765	chr16	+	69386925	69387777	True	NM_016101,NM_144676	chr16,chr16	+,-	NIP7,TMED6	-13563,-1213
chr17:67320545-67322195	chr17	+	67320558	67322168	True	NM_172232,NM_018672,NM_002758	chr17,chr17,chr17	-,-,+	ABCA5,ABCA5,MAP2K6	1205,-8784,88669
chr7:83824294-83824549	chr7	+	83824360	83824576	True	NM_006080,NM_000840	chr7,chr7	-,+	SEMA3A,GRM3	-143,2448653
chr11:3405041-3405559	chr11	+	3405136	3405436	True	NM_001130519,NM_001130520,NM_007152,NR_024248	chr11,chr11,chr11,chr11	-,-,-,+	ZNF195,ZNF195,ZNF195,LOC650368	-4688,-4688,-4688,-3003
chr17:18382556-18383129	chr17	+	18382574	18383142	True	NR_003554,NM_001040078	chr17,chr17	-,+	LOC220594,LGALS9C	41474,-2526
chr17:18382556-18383129	chr17	-	20367894	20368006	False	NM_001190790,NM_001042685	chr17,chr17	+,-	CDRT15L2,LGALS9B	115030,2892
chr2:15701594-15703531	chr2	+	15701600	15703523	True	NM_004939,NM_015909	chr2,chr2	+,-	DDX1,NBAS	28246,-146
chr14:70820785-70822235	chr14	+	70821102	70822238	True	NM_001204090,NM_003813,NM_016468	chr14,chr14,chr14	-,+,-	COX16,ADAM21,COX16	4260,101978,4260
chr6:10415305-10415595	chr6	+	10415458	10415594	True	NM_001042425,NM_001032280,NR_033910,NM_003220	chr6,chr6,chr6,chr6	-,-,+,-	TFAP2A,TFAP2A,LOC100130275,TFAP2A	4253,-2851,-2958,12
chr9:124261080-124261333	chr9	+	124261079	124261300	True	NR_003191,NM_032552	chr9,chr9	-,+	GGTA1,DAB2IP	1056,68098
chr3:184099339-184099638	chr3	+	184099440	184099612	True	NM_001177598,NM_003741,NM_000460,NM_001177597	chr3,chr3,chr3,chr3	-,+,-,-	THPO,CHRD,THPO,THPO	-3508,-1630,-3508,-3508
chr1:111992171-111994155	chr1	+	111992211	111994191	True	NM_001688,NM_024102	chr1,chr1	+,-	ATP5F1,WDR77	-519,-381
chr3:69789353-69789765	chr3	+	69789488	69789810	True	NM_015123,NM_198159	chr3,chr3	-,+	FRMD4B,MITF	-354058,-953
chrX:77045126-77046665	chrX	+	77045318	77046134	True	NM_138270,NM_001866,NM_000489	chrX,chrX,chrX	-,+,-	ATRX,COX7B,ATRX	-3599,108826,-3599
chr14:103592603-103592990	chr14	+	103592659	103592955	True	NR_033938,NM_006291	chr14,chr14	-,+	LOC100131366,TNFAIP2	62460,-46
chrX:151081324-151081944	chrX	+	151081358	151081937	True	NR_029973,NM_002362,NM_001011548,NM_001011549,NM_001011550	chrX,chrX,chrX,chrX,chrX	-,+,+,+,+	MIR452,MAGEA4,MAGEA4,MAGEA4,MAGEA4	46297,2771,-48,3459,4822
chr3:113557644-113558162	chr3	+	113557831	113558190	True	NM_017577,NM_025146	chr3,chr3	+,-	GRAMD1C,NAA50	-207,-92711
chr3:141059593-141060888	chr3	+	141060401	141060671	True	NM_001178140,NM_001080412	chr3,chr3	-,+	TFDP2,ZBTB38	658610,-17398
chr15:90059913-90061884	chr15	+	90060226	90061034	True	NR_027074,NR_027075,NR_027076,NR_027077,NM_152259	chr15,chr15,chr15,chr15,chr15	-,-,-,-,+	LOC283761,LOC283761,LOC283761,LOC283761,C15orf42	6291,6291,6291,6291,57783
chr19:8567931-8568211	chr19	+	8567938	8567998	True	NM_032152,NM_031203	chr19,chr19	-,+	PRAM1,HNRNPM	-400,-58186
chr6:159468792-159469120	chr6	+	159468796	159469146	True	NM_054114,NM_152133,NM_138810,NM_032532	chr6,chr6,chr6,chr6	-,-,-,+	TAGAP,TAGAP,TAGAP,FNDC1	-2612,-2612,-2612,121282
chr3:28283454-28284705	chr3	+	28283484	28284450	True	NM_022461,NM_182523	chr3,chr3	-,+	AZI2,CMC1	106218,-420
chr2:167974415-167975212	chr2	+	167974415	167975199	True	NM_002976,NM_001199144	chr2,chr2	-,+	SCN7A,XIRP2	-630937,68593
chr10:26734607-26735418	chr10	+	26734702	26735458	True	NM_001012750,NM_019043	chr10,chr10	-,+	ABI1,APBB1IP	414608,-7488
chr12:98987707-98987983	chr12	+	98987906	98987982	True	NM_005888,NR_003015,NM_002635,NM_213611,NM_201612	chr12,chr12,chr12,chr12,chr12	+,+,+,+,-	SLC25A3,SNORA53,SLC25A3,SLC25A3,IKBIP	-554,5430,-554,-554,50657
chr1:214776847-214777299	chr1	+	214776865	214777106	True	NM_016343,NM_005401	chr1,chr1	+,-	CENPF,PTPN14	-384,-51841
chr17:73973569-73974334	chr17	+	73973707	73974143	True	NM_007292,NM_001185039,NM_001113324,NR_037709,NM_004035	chr17,chr17,chr17,chr17,chr17	-,-,+,+,-	ACOX1,ACOX1,C17orf106,C17orf106-CDK3,ACOX1	1434,1434,1154,1154,1434
chr8:110104961-110105926	chr8	+	110104983	110105590	True	NM_001128211,NM_003301	chr8,chr8	-,+	NUDCD1,TRHR	236622,-5374
chr3:149700495-149700991	chr3	+	149700577	149701005	True	NM_053024,NR_036538	chr3,chr3	-,+	PFN2,LOC646903	-11836,-11562
chr1:2285443-2285860	chr1	+	2285572	2285638	True	NM_007033,NR_024489	chr1,chr1	+,-	RER1,LOC100129534	37575,-1472
chr17:28448910-28450427	chr17	+	28448912	28450474	True	NR_036149,NM_032141,NR_029945	chr17,chr17,chr17	-,+,+	MIR3184,CCDC55,MIR423	-4734,-5130,-4867
chr12:94032814-94034590	chr12	+	94032836	94033551	True	NM_003348,NM_003805	chr12,chr12	-,+	UBE2N,CRADD	-196810,37599
chr1:110254773-110255333	chr1	+	110254889	110255365	True	NM_000851,NM_000849	chr1,chr1	+,-	GSTM5,GSTM3	-76,28345
chr2:158296834-158297076	chr2	+	158296834	158297094	True	NM_014568,NM_004288	chr2,chr2	+,-	GALNT5,CYTIP	-182545,3560
chr2:216300961-216301540	chr2	+	216300980	216301556	True	NM_004044,NM_002026,NM_054034,NM_212476,NM_212474,NM_212482,NM_212478	chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-,-	ATIC,FN1,FN1,FN1,FN1,FN1,FN1	-124352,-189,-189,-189,-189,-189,-189
chr4:57520068-57521375	chr4	+	57520101	57521379	True	NM_139211,NM_001145459,NM_206919	chr4,chr4,chr4	-,-,+	HOPX,HOPX,ARL9	1359,1359,-148777
chr6:41185216-41186102	chr6	+	41185235	41185727	True	NM_198153,NR_027256	chr6,chr6	+,-	TREML4,TREML3	10334,8
chr19:36118521-36118838	chr19	+	36118588	36118676	True	NM_000704,NM_024321	chr19,chr19	-,+	ATP4A,RBM42	-64028,1303
chr5:79722997-79724053	chr5	+	79723075	79723353	True	NR_003665,NM_014733	chr5,chr5	-,+	CRSP8P,ZFYVE16	-75290,-19299
chr1:216559063-216559559	chr1	+	216559063	216559485	True	NM_206933,NM_016121	chr1,chr1	-,+	USH2A,KCTD3	37313,-818385
chr22:41076655-41077331	chr22	+	41076723	41077287	True	NM_020831,NM_005297	chr22,chr22	-,+	MKL1,MCHR1	-44033,-1592
chr18:3352461-3353522	chr18	+	3352588	3353302	True	NM_019856,NM_174886	chr18,chr18	-,+	MYOM1,TGIF1	-132482,58769
chr11:61595813-61596021	chr11	+	61595937	61596021	True	NM_013402,NM_004265	chr11,chr11	-,+	FADS1,FADS2	-11408,-275
chr15:58270954-58271592	chr15	+	58271269	58271625	True	NM_020980,NM_170697	chr15,chr15	+,-	AQP9,ALDH1A2	158782,34660
chr19:54311297-54312102	chr19	+	54311523	54312125	True	NM_033297,NR_029866	chr19,chr19	-,+	NLRP12,MIR373	-26,-19615
chr2:61644967-61646441	chr2	+	61645495	61646303	True	NM_152392,NR_003707	chr2,chr2	+,-	AHSA2,SNORA70B	-240999,-983
chr6:31776182-31776629	chr6_qbl_hap6	+	3070039	3070125	False	NM_005345,NM_005527,NM_021177	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	+,-,-	HSPA1A,HSPA1L,LSM2	6812,6417,-1659
chr6:31776182-31776629	chr6_dbb_hap3	+	3061984	3062070	False	NM_005345,NM_005527,NM_021177	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	+,-,-	HSPA1A,HSPA1L,LSM2	6807,6412,-1658
chr6:31776182-31776629	chr6	+	31776401	31776487	True	NM_005345,NM_005527,NM_021177	chr6,chr6,chr6	+,-,-	HSPA1A,HSPA1L,LSM2	6803,6408,-1658
chr6:31776182-31776629	chr6_apd_hap1	+	3091152	3091238	False	NM_005345,NM_005527,NM_021177	chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1	+,-,-	HSPA1A,HSPA1L,LSM2	6813,6418,-1658
chr6:31776182-31776629	chr6_cox_hap2	+	3285974	3286060	False	NM_005345,NM_005527,NM_021177	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,-,-	HSPA1A,HSPA1L,LSM2	6810,6415,-1660
chr6:5083703-5084291	chr6	+	5083820	5084141	True	NM_001145115,NR_037462	chr6,chr6	+,-	PPP1R3G,MIR3691	1578,64470
chr12:4913057-4913999	chr12	+	4913119	4914045	True	NM_006422,NM_002235	chr12,chr12	-,+	AKAP3,KCNA6	-158776,4296
chr17:79371798-79372190	chr17	+	79371838	79372108	True	NM_001080519,NR_036152	chr17,chr17	+,-	BAHCC1,MIR3186	1431,46156
chr5:112195900-112196474	chr5	+	112196027	112196523	True	NM_001204199,NM_001204196,NM_001204194,NM_001204193,NM_005669,NM_003135	chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,-,+	SRP19,SRP19,SRP19,SRP19,REEP5,SRP19	361,361,361,361,61558,361
chr15:51894784-51895783	chr15	+	51894800	51895788	True	NM_001174116,NM_001165257	chr15,chr15	-,+	DMXL2,SCG3	19232,77761
chr4:139094508-139095793	chr4	+	139094838	139095695	True	NR_037866,NM_012118	chr4,chr4	-,+	LOC641365,CCRN4L	-42999,841247
chr15:69609785-69610077	chr15	+	69609882	69610033	True	NM_001104554,NM_006305	chr15,chr15	+,-	PAQR5,ANP32A	-3191,-496621
chr1:16562641-16563135	chr1	+	16562750	16563170	True	NM_001114600,NM_030907	chr1,chr1	+,-	C1orf144,RSG1	130412,539
chr1:161375972-161377493	chr1	+	161376036	161377541	True	NM_001013625,NM_003001	chr1,chr1	-,+	C1orf192,SDHC	-38372,-91921
chr2:48982406-48982661	chr2	+	48982462	48982661	True	NM_000233,NM_006872	chr2,chr2	-,+	LHCGR,GTF2A1L	269,-137576
chr9:98636285-98636763	chr9	+	98636307	98636797	True	NM_001010895,NR_023390,NR_023389	chr9,chr9,chr9	+,-,-	C9orf102,C9orf130,C9orf130	1102,1520,1520
chr14:77493603-77493923	chr14	+	77493602	77493768	True	NM_024496,NM_033426	chr14,chr14	-,+	IRF2BPL,KIAA1737	1316,70809
chr5:177658809-177659177	chr5	+	177658848	177659226	True	NM_153373,NM_031266	chr5,chr5	-,+	AGXT2L2,HNRNPAB	627,-27391
chr9:35685967-35687641	chr9	+	35686478	35687588	True	NM_001216,NM_003289,NM_213674	chr9,chr9,chr9	+,-,-	CA9,TPM2,TPM2	-12614,2516,2516
chr10:8924073-8925600	chr10	+	8924446	8925638	True	NM_002051,NR_024256	chr10,chr10	+,-	GATA3,FLJ45983	-827834,-828999
chr2:217358715-217359395	chr2	+	217358729	217359446	True	NM_000998,NM_020814	chr2,chr2	+,-	RPL37A,MARCH4	4073,-121979
chr5:149341235-149341941	chr5	+	149341418	149341792	True	NM_000112,NM_000440	chr5,chr5	+,-	SLC26A2,PDE6A	-1176,-17062
chr2:27719482-27719810	chr2	+	27719530	27719808	True	NM_022823,NM_015662,NM_001486	chr2,chr2,chr2	-,-,+	FNDC4,IFT172,GCKR	-1404,-6959,-13
chr11:118868913-118870511	chr11	+	118868946	118870103	True	NM_198489,NR_003040	chr11,chr11	+,-	CCDC84,RPL23AP64	-145,4259
chr9:125705641-125706154	chr9	+	125705641	125705958	True	NM_012197,NM_020924	chr9,chr9	+,-	RABGAP1,ZBTB26	-2411,-11862
chrX:135856664-135857210	chrX	+	135856915	135857227	True	NM_004840,NM_000074	chrX,chrX	-,+	ARHGEF6,CD40LG	6326,-126638
chr5:135693036-135694222	chr5	+	135693097	135694247	True	NM_020389,NM_001167577,NM_001167576,NM_001001419	chr5,chr5,chr5,chr5	-,-,-,+	TRPC7,TRPC7,TRPC7,SMAD5	6967,6967,6967,-224612
chr1:110882941-110883145	chr1	+	110883013	110883193	True	NM_001201545,NR_036595,NM_022768	chr1,chr1,chr1	+,-,+	RBM15,LOC440600,RBM15	-1119,-1220,-1119
chr19:18315779-18316639	chr19	+	18315821	18316628	True	NM_002866,NM_032683	chr19,chr19	-,+	RAB3A,MPV17L2	-947,-11832
chr15:42189133-42189636	chr15	+	42189293	42189625	True	NM_016642,NM_001114633	chr15,chr15	-,+	SPTBN5,PLA2G4B	-3018,-58341
chr22:21993872-21994379	chr22	+	21993945	21994105	True	NM_152612,NM_001017964,NM_022044	chr22,chr22,chr22	+,-,+	CCDC116,YDJC,SDF2L1	-6910,-9605,2436
chr15:63797544-63797907	chr15	+	63797730	63797930	True	NR_034080,NM_006537	chr15,chr15	-,+	LOC100130855,USP3	95146,-971
chr14:96155478-96157119	chr14	+	96155701	96157064	True	NM_001098725,NM_004918	chr14,chr14	-,+	TCL1A,TCL1B	23519,-2999
chr16:31442212-31443533	chr16	+	31442314	31443543	True	NM_001105247,NM_005205	chr16,chr16	+,-	ARMC5,COX6A2	26773,-2565
chr19:58063887-58065060	chr19	+	58063918	58064736	True	NM_001039654,NM_153263	chr19,chr19	-,+	ZNF550,ZNF549	3039,-25276
chr3:166965407-166966686	chr3	+	166965690	166966694	True	NM_001122752,NM_001199202	chr3,chr3	+,-	SERPINI1,ZBBX	486737,131427
chr15:31107730-31108192	chr15	+	31107730	31108103	True	NM_017762,NM_001146095	chr15,chr15	-,+	MTMR10,FAN1	175754,87951
chr15:31107730-31108192	chr15	-	28926770	28927143	False	NR_036443,NR_033351	chr15,chr15	+,-	HERC2P9,GOLGA8F	-27233,-148627
chr15:31107730-31108192	chr15	+	23285550	23285923	False	NR_024074,NR_003521	chr15,chr15	+,-	GOLGA8IP,WHAMML1	-30369,-77193
chr1:11119251-11119556	chr1	+	11119315	11119421	True	NM_003132,NM_007375	chr1,chr1	-,+	SRM,TARDBP	720,-46687
chr2:27293121-27293915	chr2	+	27293249	27293927	True	NM_007046,NM_001134693	chr2,chr2	+,-	EMILIN1,OST4	7507,690
chr15:40631713-40632248	chr15	+	40631869	40632183	True	NM_001145643,NM_207380	chr15,chr15	+,-	PHGR1,C15orf52	11050,1035
chr1:19614488-19614759	chr1	+	19614505	19614807	True	NM_012067,NR_037847,NM_001040125	chr1,chr1,chr1	-,-,+	AKR7A3,LOC100506730,PQLC2	523,7473,23932
chr17:78313765-78314067	chr17	+	78313832	78314110	True	NR_029376,NM_001164638	chr17,chr17	-,+	LOC100294362,FLJ35220	74908,74856
chr15:90725172-90725948	chr15	+	90725387	90725723	True	NM_020210,NM_006384	chr15,chr15	+,-	SEMA4B,CIB1	2428,51616
chr20:48746347-48746648	chr20	+	48746409	48746697	True	NM_005194,NM_199144	chr20,chr20	+,-	CEBPB,UBE2V1	60678,-13915
chr3:128779466-128779971	chr3	+	128779671	128779959	True	NM_001204886,NM_000174	chr3,chr3	-,+	RAB43,GP9	60738,-77
chr5:18707853-18709390	chr5	+	18708731	18709378	True	NM_001167667,NM_006317	chr5,chr5	-,+	CDH18,BASP1	1279025,-1491039
chr7:75738133-75738503	chr7	+	75738133	75738455	True	NM_005918,NM_016086	chr7,chr7	+,-	MDH2,STYXL1	-60791,-60812
chr17:72460729-72462232	chr17	+	72460729	72462267	True	NM_174892,NM_007261	chr17,chr17	-,+	CD300LB,CD300A	65396,254
chr9:117086185-117087282	chr9	+	117086267	117087159	True	NM_000607,NM_000608,NM_030767	chr9,chr9,chr9	+,+,-	ORM1,ORM2,AKNA	-1015,4909,69576
chr3:58313108-58313929	chr3	+	58313288	58313572	True	NM_017771,NR_033384	chr3,chr3	+,-	PXK,PDHB	5044,106044
chr22:39237922-39238152	chr22	+	39237944	39238150	True	NM_014293,NM_145699	chr22,chr22	-,+	NPTXR,APOBEC3A	1917,115376
chr3:50337427-50338127	chr3	+	50337530	50338008	True	NM_001200016,NM_001200029,NM_003549,NM_001200030,NM_001200031,NM_001200032,NM_012191,NM_001200018,NM_153285,NM_007312,NM_153282,NM_153215,NM_153283,NM_006764,NM_033159	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,-,-,-,-,-,-,-,+,-,-,-	NAT6,HYAL3,HYAL3,HYAL3,HYAL3,HYAL3,NAT6,NAT6,HYAL1,HYAL1,HYAL1,C3orf45,HYAL1,IFRD2,HYAL1	-678,-1237,-631,-631,-631,-631,-678,-1210,3046,3046,3046,-21063,3046,-7504,3046
chr7:140942463-140943803	chr7	+	140942672	140943794	True	NM_053035,NM_001195278	chr7,chr7	-,+	MRPS33,LOC100131199	-227891,-168692
chr15:38850211-38850459	chr15	+	38850304	38850508	True	NM_005739,NM_173611,NM_001128602	chr15,chr15,chr15	-,+,-	RASGRP1,FAM98B,RASGRP1	6549,-104034,6549
chr20:33290671-33291414	chr20	+	33290859	33291463	True	NM_080476,NM_021202	chr20,chr20	-,+	PIGU,TP53INP2	-25770,684
chr14:21464858-21466339	chr14	+	21464984	21466298	True	NM_014579,NM_201538,NM_001029991,NR_033419,NM_022734	chr14,chr14,chr14,chr14,chr14	+,-,+,+,+	SLC39A2,NDRG2,METTL17,SLC39A2,METTL17	1115,27016,-7070,1115,-7070
chr5:148649246-148649956	chr5	+	148649461	148649877	True	NM_001146337,NM_152406,NM_014443	chr5,chr5,chr5	+,+,-	AFAP1L1,AFAP1L1,IL17B	1523,1523,109015
chrX:102982873-102983376	chrX	+	102982937	102983371	True	NM_001024452,NM_001172285,NM_182541	chrX,chrX,chrX	-,-,+	GLRA4,GLRA4,TMEM31	231,231,-17151
chr22:42020923-42022732	chr22	+	42021255	42021697	True	NM_015704,NM_001469	chr22,chr22	-,+	PPPDE2,XRCC6	-4194,-4014
chr7:87257354-87257612	chr7	+	87257375	87257557	True	NM_000927,NM_001134406,NM_001134405,NM_138290	chr7,chr7,chr7,chr7	-,+,+,+	ABCB1,RUNDC3B,RUNDC3B,RUNDC3B	85132,171,171,171
chr10:46763135-46763586	chr10	+	46763142	46763611	True	NR_027632,NR_026566,NR_003611	chr10,chr10,chr10	+,-,-	FAM35B,BMS1P1,BMS1P5	134029,-250,-250
chr10:46763135-46763586	chr10	+	47244326	47244376	False	NR_027634,NR_024495	chr10,chr10	+,-	FAM35B2,LOC642826	135343,-832
chr10:46763135-46763586	chr10	-	48184980	48185030	False	NM_002900,NR_024495	chr10,chr10	-,+	RBP3,LOC642826	206011,825
chr10:46763135-46763586	chr10	+	48953298	48953348	False	NR_026566,NM_153034,NR_003611	chr10,chr10,chr10	-,+,-	BMS1P1,ZNF488,BMS1P5	-669,-598260,-669
chr1:207118737-207120139	chr1	+	207118945	207120157	True	NM_002644,NM_006850	chr1,chr1	-,+	PIGR,IL24	-196,-48208
chr3:184014844-184015458	chr3	+	184015041	184015463	True	NM_033259,NM_002808	chr3,chr3	-,+	CAMK2N2,PSMD2	-35790,1558
chr15:95978199-95978850	chr15	+	95978200	95978867	True	NR_027133,NR_027132,NR_034095	chr15,chr15,chr15	+,+,-	LOC145820,LOC145820,LOC400456	-1931,-1931,-107871
chr15:68522365-68522603	chr15	+	68522435	68522569	True	NM_017882,NM_015322	chr15,chr15	-,+	CLN6,FEM1B	-355,47571
chr11:60068011-60069171	chr11	+	60068484	60069168	True	NM_022349,NM_024021	chr11,chr11	-,+	MS4A6A,MS4A4A	-117810,-18457
chrX:47486587-47486972	chrX	+	47486609	47486995	True	NM_001145252,NM_133499,NM_006950,NM_002621,NR_028119	chrX,chrX,chrX,chrX,chrX	-,-,-,-,+	CFP,SYN1,SYN1,CFP,LOC100133957	2424,-7353,-7353,2759,31236
chr12:8760303-8760816	chr12	+	8760347	8760495	True	NM_020661,NM_020734	chr12,chr12	-,+	AICDA,RIMKLB	5003,90022
chr19:1439420-1439766	chr19	+	1439531	1439791	True	NM_138924,NM_001018	chr19,chr19	-,+	GAMT,RPS15	-37979,-1219
chr2:132480736-132481588	chr2	+	132480871	132481553	True	NM_214461,NM_013310	chr2,chr2	-,+	C2orf27B,C2orf27A	77731,-858
chr1:160116197-160117622	chr1	+	160116382	160117531	True	NM_144699,NM_052868	chr1,chr1	+,-	ATP1A4,IGSF8	3820,-47974
chr6:26253487-26254088	chr6	+	26253515	26254087	True	NM_003547,NM_003524,NM_021018	chr6,chr6,chr6	-,+,-	HIST1H4G,HIST1H2BH,HIST1H3F	-6310,-1695,-2680
chr10:89420591-89420884	chr10	+	89420595	89420813	True	NM_001015880,NM_004670,NM_032810	chr10,chr10,chr10	+,+,-	PAPSS2,PAPSS2,ATAD1	-1170,-1170,157154
chr9:80233842-80235368	chr9	+	80234080	80235283	True	NM_004297,NM_033305	chr9,chr9	-,+	GNA14,VPS13A	28006,-441770
chr16:77223721-77224187	chr16	+	77223947	77224145	True	NM_001129979,NM_014940,NM_199355	chr16,chr16,chr16	+,+,-	SYCE1L,MON1B,ADAMTS18	9203,690,244916
chr15:50551281-50551629	chr15	+	50551389	50551645	True	NM_002112,NM_003645	chr15,chr15	-,+	HDC,SLC27A2	6567,-77053
chr7:66369609-66370282	chr7	+	66369636	66370312	True	NR_003934,NM_017994	chr7,chr7	-,+	LOC729156,C7orf42	-59823,15890
chr19:7954680-7955394	chr19	+	7954982	7955272	True	NM_025061,NR_033250	chr19,chr19	+,-	LRRC8E,LOC388499	-1643,-9865
chr10:125752857-125753255	chr10	+	125753048	125753212	True	NM_153442,NM_015892	chr10,chr10	+,-	GPR26,CHST15	-327229,98768
chr1:45808306-45808897	chr1	+	45808466	45808898	True	NM_001128425,NM_012222,NM_025077,NM_001048174,NM_001048173,NM_001048172,NM_001048171	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,+,-,-,-,-	MUTYH,MUTYH,TOE1,MUTYH,MUTYH,MUTYH,MUTYH	-2324,-2324,-3175,-2837,-2679,-2679,-2324
chr11:64981854-64982062	chr11	+	64981924	64982064	True	NM_172230,NM_001004326,NR_033396	chr11,chr11,chr11	-,+,+	SYVN1,SLC22A20,SLC22A20	-79921,-664,-664
chr19:10943240-10943681	chr19	+	10943338	10943720	True	NM_001136482,NM_006858	chr19,chr19	+,-	C19orf38,TMED1	15385,3313
chr19:4068816-4070099	chr19	+	4069122	4069888	True	NM_015897,NM_015898	chr19,chr19	+,-	PIAS4,ZBTB7A	-61424,-2306
chr15:78238810-78239223	chr15	+	78239142	78239206	True	NM_001101404,NR_027024	chr15,chr15	+,-	SH2D7,LOC645752	145720,-19954
chr19:37718317-37718552	chr19	+	37718379	37718561	True	NM_152279,NM_152604	chr19,chr19	-,+	ZNF585B,ZNF383	-16928,-1067
chr19:34394602-34395852	chr19	+	34394907	34395812	True	NM_001166057,NM_024076	chr19,chr19	-,+	PEPD,KCTD15	-382108,-107207
chr12:44153011-44153253	chr12	+	44153111	44153283	True	NM_016123,NM_001114182,NM_001145256,NM_001145258,NM_001098615,NM_001098614,NM_031292,NM_001145257	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,+,+,-,-,-,+	IRAK4,IRAK4,IRAK4,IRAK4,PUS7L,PUS7L,PUS7L,IRAK4	-415,-415,-415,-415,-550,-549,-515,-415
chr3:62303495-62304676	chr3	+	62303678	62304500	True	NM_020685,NM_018008	chr3,chr3	+,-	C3orf14,FEZF2	895,54740
chr2:225446529-225446890	chr2	+	225446528	225446607	True	NM_022915,NM_003590	chr2,chr2	+,-	MRPL44,CUL3	-624458,3558
chr19:50877554-50878667	chr19	+	50877666	50878332	True	NM_007121,NM_004851,NM_002691	chr19,chr19,chr19	+,-,+	NR1H2,NAPSA,POLD1	1352,-8735,9260
chr3:77087921-77088561	chr3	+	77087964	77088587	True	NM_002942,NM_001128223	chr3,chr3	+,-	ROBO2,ZNF717	706,-1253709
chr9:99675102-99676313	chr9	+	99675657	99676346	True	NR_028350,NM_001001662	chr9,chr9	+,-	LOC441454,ZNF782	-4357,-59268
chr9:99675102-99676313	chr9	-	97106498	97106554	False	NM_017561,NR_033937	chr9,chr9	-,+	FAM22F,LOC100132077	-15572,-11797
chr19:2284311-2284611	chr19	+	2284315	2284385	True	NM_198532,NM_004152	chr19,chr19	-,+	C19orf35,OAZ1	-2134,-14846
chr10:105111807-105112383	chr10	+	105112128	105112221	True	NM_006951,NM_032154,NM_001011663	chr10,chr10,chr10	+,-,-	TAF5,PCGF6,PCGF6	15502,-1237,-1237
chr18:55255606-55257255	chr18	+	55255776	55257293	True	NM_001012515,NM_004852,NM_000140	chr18,chr18,chr18	-,+,-	FECH,ONECUT2,FECH	-1807,-152910,-1807
chr19:247429-248911	chr19	+	247646	248214	True	NM_177543,NM_001005240	chr19,chr19	-,+	PPAP2C,OR4F17	43005,-137020
chr19:247429-248911	chr8	+	157441	157595	False	NR_003572,NM_173539	chr8,chr8	-,+	RPL23AP53,ZNF596	24773,24604
chr5:173150831-173151435	chr5	+	173150906	173151463	True	NR_027109,NM_138369	chr5,chr5	+,-	LOC285593,BOD1	-144300,-107240
chr1:91184516-91184992	chr1	+	91184515	91184979	True	NM_020063,NM_182976	chr1,chr1	-,+	BARHL2,ZNF326	-1721,-723888
chr17:21280659-21280914	chr17	+	21280681	21280819	True	NM_152914,NM_021012	chr17,chr17	-,+	C17orf103,KCNJ12	-124103,-1033
chr16:50718137-50720054	chr16	+	50718506	50719944	True	NM_153337,NM_022162,NM_182854,NM_001144972	chr16,chr16,chr16,chr16	-,+,-,-	SNX20,NOD2,SNX20,SNX20	-3242,11105,-3242,-3242
chr19:48776211-48776524	chr19	+	48776355	48776555	True	NM_001184904,NM_153608	chr19,chr19	-,+	CARD8,ZNF114	-17152,-1752
chr19:16286275-16287550	chr19	+	16286502	16287245	True	NM_014077,NM_054113	chr19,chr19	+,-	FAM32A,CIB3	8989,-2216
chrX:2996999-2998303	chrX	+	2997072	2998205	True	NM_000047,NM_004042	chrX,chrX	-,+	ARSE,ARSF	-114578,-12284
chr7:64126636-64126875	chr7	+	64126635	64126919	True	NM_001013746,NM_001130022,NM_016220	chr7,chr7,chr7	+,-,+	ZNF107,ZNF680,ZNF107	-175,-103130,-175
chr3:128778340-128779275	chr3	+	128778686	128779183	True	NM_001204886,NM_000174	chr3,chr3	-,+	RAB43,GP9	61514,461
chr15:35529972-35531406	chr15	+	35530134	35530839	True	NR_003144,NR_037507	chr15,chr15	+,-	LOC723972,MIR3942	-660,133777
chr12:25403350-25403582	chr12	+	25403409	25403519	True	NM_001001660,NM_004985,NM_033360	chr12,chr12,chr12	+,-,-	LYRM5,KRAS,KRAS	-55310,385,385
chr6:71376647-71377392	chr6	+	71376649	71377305	True	NM_080742,NM_001044305,NM_021940	chr6,chr6,chr6	-,+,+	B3GAT2,SMAP1,SMAP1	289533,173,173
chr12:97857206-97858898	chr12	+	97857213	97858851	True	NR_024037,NR_036189	chr12,chr12	+,-	RMST,MIR4303	-53,530425
chr10:105255031-105255719	chr10	+	105255138	105255536	True	NM_001129742,NM_004210	chr10,chr10	-,+	CALHM3,NEURL	-16141,-1457
chr21:43530143-43530402	chr21	+	43530349	43530423	True	NM_173568,NR_027243	chr21,chr21	+,-	UMODL1,C21orf128	-38974,-1705
chr3:51971161-51972775	chr3	+	51971436	51972810	True	NM_005485,NM_001003931,NM_004704	chr3,chr3,chr3	+,+,-	PARP3,PARP3,RRP9	3550,3550,3162
chr16:88210779-88211208	chr16	+	88210834	88211157	True	NM_001173543,NM_001739	chr16,chr16	+,-	BANP,CA5A	-207261,-240722
chr11:64357681-64358557	chr11	+	64357702	64358290	True	NM_153378,NM_144585,NM_138734	chr11,chr11,chr11	+,+,-	SLC22A12,SLC22A12,NRXN2	-9,-9,52547
chrX:46306475-46306709	chrX	+	46306497	46306569	True	NM_001039891,NM_001129898,NM_001129899,NM_001129900,NM_017776	chrX,chrX,chrX,chrX,chrX	-,+,+,+,+	ZNF674,ZNF673,ZNF673,ZNF673,ZNF673	98373,54,54,54,54
chr5:169533531-169534530	chr5	+	169533854	169534552	True	NM_144769,NM_012188,NM_001129891	chr5,chr5,chr5	+,+,-	FOXI1,FOXI1,FAM196B	-995,-995,-126110
chrX:139587895-139588247	chrX	+	139587990	139588233	True	NR_028345,NM_005634	chrX,chrX	+,-	RP1-177G6.2,SOX3	203690,-765
chr2:109397793-109398729	chr2	+	109397825	109398782	True	NM_144978,NM_022336	chr2,chr2	+,-	CCDC138,EDAR	4436,207101
chr11:67481765-67482177	chr11	+	67481833	67482019	True	NM_007103,NM_001031615	chr11,chr11	+,-	NDUFV1,ALDH3B2	-107561,-33148
chr11:67481765-67482177	chr11	+	67761819	67761875	False	NM_030930,NM_001161473	chr11,chr11	-,+	UNC93B1,ALDH3B1	9768,14172
chr11:67481765-67482177	chr11	-	71315783	71315839	False	NM_001012710,NM_001005405	chr11,chr11	+,-	KRTAP5-10,KRTAP5-11	-39225,-21862
chr19:710942-711386	chr19	+	710966	711278	True	NM_214710,NM_002579,NM_001040134	chr19,chr19,chr19	-,+,+	PRSS57,PALM,PALM	-15505,-2064,-2064
chr13:96088528-96089868	chr13	+	96088791	96089899	True	NM_001105515,NM_182848,NM_001160100	chr13,chr13,chr13	-,+,+	ABCC4,CLDN10,CLDN10	-135104,-2996,-2996
chrX:19141988-19143407	chrX	+	19141988	19143383	True	NM_001079858,NM_001079859,NM_001079860,NM_001184835,NM_001184834,NM_001184837,NM_001184836,NM_001184833,NM_000284,NM_005756	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,-,-,-,+,-	GPR64,GPR64,GPR64,GPR64,GPR64,GPR64,GPR64,GPR64,PDHA1,GPR64	-1233,-1233,-1233,-1233,-1233,-1233,-1233,-1233,218627,-1233
chr11:131120024-131121372	chr11	+	131120105	131121211	True	NM_001048209,NM_014758	chr11,chr11	+,-	NTM,SNX19	119159,-333723
chr19:51020044-51020316	chr19	+	51020197	51020259	True	NM_138334,NM_001024656,NM_001114598,NM_206538	chr19,chr19,chr19,chr19	-,-,-,+	JOSD2,ASPDH,ASPDH,C19orf63	-5852,-2250,-3055,-40516
chr4:122617554-122617856	chr4	+	122617646	122617834	True	NR_024365,NM_001154	chr4,chr4	+,-	LOC100192379,ANXA5	67905,363
chr19:39882763-39883826	chr19	+	39882799	39883160	True	NM_019088,NM_017592	chr19,chr19	-,+	PAF1,MED29	-1120,-887
chr15:43878720-43880341	chr15	+	43878971	43880014	True	NM_001190214,NM_014659,NM_001130858,NM_001130859,NM_020990	chr15,chr15,chr15,chr15,chr15	-,-,-,-,+	PPIP5K1,PPIP5K1,PPIP5K1,PPIP5K1,CKMT1B	2494,-1881,2494,2494,5237
chr15:43878720-43880341	chr15	+	43978803	43979846	False	NM_001015001,NM_172097	chr15,chr15	+,-	CKMT1A,CATSPER2	5237,-37764
chr10:101090652-101091343	chr10	+	101090665	101091343	True	NM_021828,NM_020348	chr10,chr10	-,+	HPSE2,CNNM1	-95033,-1860
chr17:5323765-5324641	chr17	+	5323821	5324408	True	NR_027685,NM_001160243,NM_001160244,NR_027681,NM_001160246,NR_027680,NM_001033002,NM_002532,NR_027682,NR_027684,NR_027683,NM_001160266,NM_001160267,NR_027678,NR_027679	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,+,+,-,+,+,+,+,+,+,+	RPAIN,RPAIN,RPAIN,RPAIN,RPAIN,RPAIN,RPAIN,NUP88,RPAIN,RPAIN,RPAIN,RPAIN,RPAIN,RPAIN,RPAIN	-912,-912,-912,-912,-912,-912,-912,-762,-912,-912,-912,-912,-912,-912,-912
chr10:91389944-91390340	chr10	+	91389944	91390247	True	NM_016195,NM_138316	chr10,chr10	+,-	KIF20B,PANK1	71119,13463
chr19:3883444-3884814	chr19	+	3883457	3884683	True	NM_001145640,NM_033064	chr19,chr19	-,+	ZFR2,ATCAY	-14430,-2898
chr11:132816854-132818026	chr11	+	132817093	132818018	True	NM_002545,NM_016522	chr11,chr11	-,+	OPCML,NTM	-4056,-1036432
chr10:94833341-94833700	chr10	+	94833473	94833625	True	NM_013451,NM_057157,NM_000783	chr10,chr10,chr10	-,+,+	MYOF,CYP26A1,CYP26A1	408499,-292,21
chr6:88869901-88870312	chr6	+	88870049	88870115	True	NM_001160259,NM_001160258,NM_001160226,NM_030960,NM_001160260,NM_016083	chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,+,-,-	CNR1,CNR1,CNR1,SPACA1,CNR1,CNR1	5708,5708,5708,-112598,-9167,5708
chr4:89621568-89622994	chr4	+	89621628	89622837	True	NR_002806,NM_153757	chr4,chr4	+,-	FAM13AOS,NAP1L5	8102,-2605
chr2:166808261-166809872	chr2	+	166808337	166809905	True	NM_024969,NM_024753	chr2,chr2	+,-	CSRNP3,TTC21B	-379552,493
chr9:33814604-33815926	chr9	+	33814624	33815891	True	NR_003685,NR_023917,NM_017811	chr9,chr9,chr9	-,-,+	SNORD121A,PTENP1,UBE2R2	137025,-137206,1290
chr20:57090157-57090365	chr20	+	57090282	57090384	True	NM_153360,NR_034147	chr20,chr20	-,+	APCDD1L,LOC149773	-333,50
chr19:573522-573878	chr19	+	573725	573903	True	NM_198589,NM_005035,NM_001728,NM_198591	chr19,chr19,chr19,chr19	+,-,+,+	BSG,POLRMT,BSG,BSG	-1239,59715,-1239,-2451
chr19:12834633-12835398	chr19	+	12834647	12835215	True	NM_001136196,NM_001136195,NM_004317,NM_013433	chr19,chr19,chr19,chr19	-,-,+,-	TNPO2,TNPO2,ASNA1,TNPO2	-1185,51,13090,-1542
chr2:202559880-202560891	chr2	+	202560053	202560937	True	NM_033066,NM_139158	chr2,chr2	-,+	MPP4,CDK15	2531,110260
chr1:47900552-47900939	chr1	+	47900596	47900938	True	NR_026878,NM_004474	chr1,chr1	-,+	MGC12982,FOXD2	-283,750
chr17:4738643-4739178	chr17	+	4738960	4739144	True	NM_001024937,NM_182566,NM_170663,NM_153827,NM_015716	chr17,chr17,chr17,chr17,chr17	+,-,+,+,+	MINK1,VMO1,MINK1,MINK1,MINK1	-2376,-49231,-2376,-2376,-2376
chr1:120348185-120348645	chr1	+	120348250	120348568	True	NM_001159352,NM_001159353,NM_032044,NM_006623	chr1,chr1,chr1,chr1	-,-,-,+	REG4,REG4,REG4,PHGDH	5685,5685,5685,-93882
chr7:148845105-148845318	chr7	+	148845199	148845365	True	NM_170686,NM_001001661	chr7,chr7	+,-	ZNF398,ZNF425	-690,-21761
chr2:219468897-219469904	chr2	+	219468897	219469277	True	NM_020935,NM_032726	chr2,chr2	-,+	USP37,PLCD4	-35813,3210
chrX:114795762-114796031	chrX	+	114795806	114796010	True	NM_005032,NM_020871	chrX,chrX	+,-	PLS3,LRCH2	-680,-327171
chr10:104631407-104633128	chr10	+	104631554	104633003	True	NM_000102,NM_020682	chr10,chr10	-,+	CYP17A1,AS3MT	-34264,-2405
chr16:30760826-30761549	chr16	+	30760985	30761436	True	NM_001172432,NM_000294,NM_001014979	chr16,chr16,chr16	+,+,-	PHKG2,PHKG2,C16orf93	-1416,-1416,12186
chr9:13989132-13989986	chr9	+	13989178	13989833	True	NR_003920,NM_001190737	chr9,chr9	+,-	LOC389705,NFIB	1003491,324271
chr5:179128160-179128899	chr5	+	179128164	179128741	True	NM_001746,NM_001164444,NM_001024649	chr5,chr5,chr5	+,-,+	CANX,CBY3,CANX	-2285,-20189,-2285
chr11:69292338-69292907	chr11	+	69292597	69292907	True	NM_153451,NM_053056	chr11,chr11	-,+	ORAOV1,CCND1	197308,162965
chr3:169486609-169486916	chr3	+	169486711	169486901	True	NR_001566,NM_001185118,NR_033703,NR_033702,NM_018657,NM_032487,NM_001185119	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,+,+,+,-,+	TERC,MYNN,MYNN,MYNN,MYNN,ARPM1,MYNN	-3863,3951,3951,3951,3951,832,5151
chr2:110549827-110551098	chr2	+	110549926	110550753	True	NM_178584,NM_005054,NM_001037866,NM_032260,NM_001123363	chr2,chr2,chr2,chr2,chr2	-,+,+,+,+	SEPT10,RGPD5,RGPD6,RGPD5,RGPD6	-178143,1212,-70,-70,-70
chr2:110549827-110551098	chr2	-	111335890	111336717	False	NM_001142807,NM_005054,NM_001123363,NM_032260,NM_001037866	chr2,chr2,chr2,chr2,chr2	+,-,-,-,-	ACOXL,RGPD5,RGPD6,RGPD5,RGPD6	153432,-1212,70,70,70
chr2:110549827-110551098	chr2	+	109306104	109306764	False	NM_022336,NM_006267	chr2,chr2	-,+	EDAR,RANBP2	299114,29172
chr1:108768979-108769408	chr1	+	108769068	108769394	True	NM_001143987,NM_001143989	chr1,chr1	+,-	NBPF6,NBPF4	223509,17359
chr1:108768979-108769408	chr1	-	109010193	109010243	False	NM_001102592,NM_001143988	chr1,chr1	-,+	HENMT1,NBPF6	193551,-17340
chr2:110655990-110657231	chr2	+	110656009	110657267	True	NR_036225,NR_038099,NR_027467,NM_001205288,NR_027145,NM_033514	chr2,chr2,chr2,chr2,chr2,chr2	-,+,+,+,+,+	MIR4267,LOC100288695,LIMS3,LOC100288695,LIMS3-LOC440895,LIMS3	170402,-51,-51,-51,-51,-51
chr2:110655990-110657231	chr2	+	109271234	109272492	False	NM_001193485,NM_022336	chr2,chr2	+,-	LIMS1,EDAR	-18,333386
chr2:110655990-110657231	chr2	-	111229393	111230651	False	NR_037626,NR_038099,NR_027467,NM_001205288,NR_027145,NM_033514	chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-	LOC100507334,LOC100288695,LIMS3,LOC100288695,LIMS3-LOC440895,LIMS3	-226229,51,51,51,51,51
chr6:116947663-116948453	chr6	+	116947794	116948309	True	NM_145062,NM_001161664	chr6,chr6	-,+	ZUFSP,RSPH4A	41725,-10210
chr7:140098401-140098626	chr7	+	140098457	140098663	True	NM_207113,NM_032295,NM_001008749	chr7,chr7,chr7	-,-,+	SLC37A3,SLC37A3,RAB19	-146,-146,5179
chr7:127233740-127234192	chr7	+	127233783	127234206	True	NM_024523,NM_020369,NM_001662	chr7,chr7,chr7	-,+,+	GCC1,FSCN3,ARF5	-8129,-145,-5428
chr11:62599466-62599719	chr11	+	62599490	62599767	True	NM_003164,NM_018093,NM_001012662	chr11,chr11,chr11	-,-,+	STX5,WDR74,SLC3A2	-55,7911,23716
chr7:105316583-105317034	chr7	+	105316598	105316868	True	NM_138495,NM_021930	chr7,chr7	-,+	ATXN7L1,RINT1	2791,-144117
chr17:40539958-40540181	chr17	+	40540053	40540181	True	NM_001130020,NM_213662,NM_003150,NM_139276	chr17,chr17,chr17,chr17	+,-,-,-	ATP6V0A1,STAT3,STAT3,STAT3	70680,274,382,382
chr7:92085305-92087198	chr7	+	92085396	92087087	True	NM_000466,NM_021167	chr7,chr7	-,+	PEX1,GATAD1	70821,-8692
chr14:21213607-21215308	chr14	+	21213770	21215150	True	NM_198232,NM_006683	chr14,chr14	-,+	RNASE1,EDDM3A	55458,123
chr19:44099884-44100197	chr19	+	44100053	44100185	True	NM_001007561,NM_024327,NM_001145347	chr19,chr19,chr19	-,+,+	IRGQ,ZNF576,ZNF576	152,358,552
chr9:37785554-37786655	chr9	+	37785708	37786372	True	NM_016042,NM_001002269,NM_024345	chr9,chr9,chr9	-,-,+	EXOSC3,EXOSC3,DCAF10	-643,-641,14417
chr1:53393208-53393439	chr1	+	53393217	53393431	True	NM_002979,NM_001198962,NM_001193599,NM_001193600,NM_001193617,NM_018281,NM_001198961,NM_001007098	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,-,+,+,+,-,-,+	SCP2,ECHDC2,SCP2,SCP2,SCP2,ECHDC2,ECHDC2,SCP2	-367,-5771,-367,-367,-367,-5771,-5771,-367
chr3:110789762-110789977	chr3	+	110789831	110789981	True	NM_024508,NM_015480	chr3,chr3	-,+	ZBED2,PVRL3	524235,883
chr10:32761817-32763458	chr10	+	32762074	32763513	True	NM_025209,NM_145023	chr10,chr10	-,+	EPC1,CCDC7	-125961,-27097
chr8:8237034-8237276	chr8	+	8237044	8237322	True	NR_024361,NM_001080826	chr8,chr8	+,-	FLJ10661,SGK223	-151003,1985
chr7:44056650-44057798	chr7	+	44056743	44057639	True	NM_175064,NR_003655	chr7,chr7	+,-	SPDYE1,POLR2J4	-16305,1159
chr1:161087928-161088282	chr1	+	161087937	161088325	True	NM_012394,NM_001185094,NM_001185092,NM_005600,NM_001185093	chr1,chr1,chr1,chr1,chr1	-,+,+,+,+	PFDN2,NIT1,NIT1,NIT1,NIT1	-71,-80,-126,-126,-81
chr6:94430008-94430326	chr6	+	94430008	94430202	True	NM_004440,NR_015362	chr6,chr6	-,+	EPHA7,TSG1	-300708,-13263
chr17:67322247-67322873	chr17	+	67322246	67322790	True	NM_172232,NM_002758	chr17,chr17	-,+	ABCA5,MAP2K6	583,88047
chr3:172837799-172838097	chr3	+	172837912	172838146	True	NM_014932,NM_031955	chr3,chr3	+,-	NLGN1,SPATA16	278097,20962
chr22:32766363-32766762	chr22	+	32766474	32766654	True	NR_002596,NR_001450,NM_001098535	chr22,chr22,chr22	-,-,+	RFPL3S,RFPL3S,RFPL3	461,370,-12681
chr6:36840592-36841886	chr6	+	36840683	36841914	True	NM_152734,NM_016059	chr6,chr6	+,-	C6orf89,PPIL1	11725,939
chr19:40801501-40803329	chr19	+	40802037	40803162	True	NM_001031696,NM_001626	chr19,chr19	+,-	PLD3,AKT2	51169,-10772
chr8:101163012-101163515	chr8	+	101163199	101163551	True	NM_172218,NM_003114,NM_001029860,NM_005034,NR_036491	chr8,chr8,chr8,chr8,chr8	+,+,-,+,-	SPAG1,SPAG1,FBXO43,POLR2K,FBXO43	6711,7011,-5100,-413,-5100
chr2:128176119-128176430	chr2	+	128176126	128176466	True	NM_000312,NM_006609	chr2,chr2	+,-	PROC,MAP3K2	-181,-75356
chr11:57958660-57959903	chr11	+	57958710	57959886	True	NM_001005283,NM_001004459	chr11,chr11	+,-	OR9Q2,OR1S2	-855,11817
chr1:228397168-228397757	chr1	+	228397182	228397748	True	NM_181465,NM_001098623,NM_052843	chr1,chr1,chr1	-,+,+	MRPL55,OBSCN,OBSCN	-100169,-1372,-1372
chr7:86577118-86578714	chr7	+	86577157	86578685	True	NM_152748,NM_001142326	chr7,chr7	-,+	KIAA1324L,DMTF1	16658,202991
chr12:13345442-13346505	chr12	+	13346194	13346492	True	NM_001080555,NM_001423	chr12,chr12	-,+	GSG1,EMP1	-89575,3109
chr1:43833970-43834219	chr1	+	43834079	43834187	True	NM_022821,NM_001255	chr1,chr1	-,+	ELOVL1,CDC20	-380,-9504
chr8:28175348-28175708	chr8	+	28175499	28175651	True	NM_018660,NM_006228	chr8,chr8	-,+	ZNF395,PNOC	68376,-901
chr2:168722968-168723729	chr2	+	168723052	168723401	True	NM_020981,NM_013233	chr2,chr2	+,-	B3GALT1,STK39	-47933,380761
chr12:131321997-131322947	chr12	+	131322288	131322888	True	NM_194356,NM_001980,NM_006325	chr12,chr12,chr12	-,-,+	STX2,STX2,RAN	973,973,33728
chr7:156930532-156931214	chr7	+	156930547	156931139	True	NM_005515,NM_014671	chr7,chr7	-,+	MNX1,UBE3C	-127200,515
chr4:121994149-121994695	chr4	+	121994209	121994723	True	NM_024574,NR_024365	chr4,chr4	-,+	C4orf31,LOC100192379	-536,691016
chr16:48779298-48779712	chr16	+	48779328	48779759	True	NM_153029,NM_031490	chr16,chr16	-,+	N4BP1,LONP2	-135208,-501168
chr8:33458379-33459037	chr8	+	33458406	33458804	True	NM_032509,NM_024025	chr8,chr8	+,-	MAK16,DUSP26	-115785,-967
chr11:86510996-86511248	chr11	+	86510995	86511247	True	NM_007173,NM_001161586	chr11,chr11	+,-	PRSS23,ME3	243,-127317
chr19:48110983-48111269	chr19	+	48111123	48111261	True	NM_015711,NM_001101419	chr19,chr19	+,-	GLTSCR1,ZNF541	191,-52010
chr21:34605971-34607951	chr21	+	34605971	34607765	True	NM_207585,NM_207584,NR_024102,NM_000874	chr21,chr21,chr21,chr21	+,+,-,+	IFNAR2,IFNAR2,C21orf54,IFNAR2	-3792,-3792,-63430,-3792
chr6:134626536-134627277	chr6	+	134626924	134627264	True	NM_004865,NM_001143676	chr6,chr6	+,-	TBPL1,SGK1	-352686,11994
chr18:31010396-31010756	chr18	+	31010399	31010742	True	NM_030632,NM_001105528,NM_198995	chr18,chr18,chr18	+,-,-	ASXL3,C18orf34,C18orf34	147798,9360,10000
chr5:134372960-134373678	chr5	+	134373066	134373500	True	NM_002653,NM_178019	chr5,chr5	-,+	PITX1,CATSPER3	-3102,-69523
chr21:45658543-45659080	chr21	+	45658807	45659031	True	NM_000383,NM_015259	chr21,chr21	+,-	AIRE,ICOSLG	46731,1853
chr2:172307148-172309054	chr2	+	172307224	172308894	True	NR_028482,NM_024770	chr2,chr2	+,-	DCAF17,METTL8	-16521,-15912
chr15:41408391-41408633	chr15	+	41408462	41408604	True	NM_017553,NM_007236	chr15,chr15	-,+	INO80,CHP	-122,114832
chr12:25708130-25709065	chr12	+	25708129	25708845	True	NM_152590,NM_001145728,NM_001145729,NM_001001660,NR_027296	chr12,chr12,chr12,chr12,chr12	-,-,-,+,-	IFLTD1,IFLTD1,IFLTD1,LYRM5,IFLTD1	-1951,-1912,-1912,-360037,-1943
chr4:77871167-77871432	chr4	+	77871189	77871440	True	NM_001029870,NM_018243	chr4,chr4	-,+	ANKRD56,SEPT11	-52187,-345
chr4:6474615-6475802	chr4	+	6474742	6475826	True	NM_020416,NM_015274	chr4,chr4	-,+	PPP2R2C,MAN2B2	-416,101075
chr17:62075171-62075547	chr17	+	62075182	62075402	True	NM_001164257,NM_001191029,NM_001191031,NM_001191030,NM_000873	chr17,chr17,chr17,chr17,chr17	+,+,+,+,-	C17orf72,C17orf72,C17orf72,C17orf72,ICAM2	308,308,308,308,8931
chr19:47973834-47974035	chr19	+	47973840	47974082	True	NM_014681,NM_015063	chr19,chr19	+,-	DHX34,SLC8A2	-121353,1275
chr17:10608716-10610613	chr17	+	10608722	10610132	True	NM_004589,NM_020233	chr17,chr17	-,+	SCO1,C17orf48	-7837,-7848
chr7:105748042-105749406	chr7	+	105748703	105749460	True	NM_152750,NM_006754,NM_182715	chr7,chr7,chr7	+,-,-	CDHR3,SYPL1,SYPL1	-145097,3654,3355
chrX:55116519-55117664	chrX	+	55117010	55117637	True	NM_001037968,NM_207339	chrX,chrX	-,+	ALAS2,PAGE2	-59513,-1571
chrX:55116519-55117664	chrX	+	55103463	55103521	False	NM_001015038,NM_001037968	chrX,chrX	+,-	PAGE2B,ALAS2	-2018,-45966
chr22:45072682-45073266	chr22	+	45072755	45073227	True	NM_032287,NM_001198721,NM_001017528,NM_001017529,NM_001017530,NM_015366	chr22,chr22,chr22,chr22,chr22,chr22	-,+,+,+,+,+	LDOC1L,PRR5,PRR5,PRR5,PRR5,PRR5	-178750,-118,-8379,-8379,-118,-118
chr14:98664253-98664786	chr14	+	98664313	98664704	True	NR_015430,NM_182560	chr14,chr14	-,+	C14orf64,C14orf177	-219852,513245
chr3:136707614-136708210	chr3	+	136707646	136708244	True	NM_144717,NM_005862	chr3,chr3	+,-	IL20RB,STAG1	-30991,-236401
chr15:81617866-81618833	chr15	+	81617973	81618824	True	NM_181900,NM_004513	chr15,chr15	-,+	STARD5,IL16	-1449,-28777
chr11:6978529-6980079	chr11	+	6978585	6980118	True	NM_013249,NM_013250	chr11,chr11	-,+	ZNF214,ZNF215	61518,-30982
chr14:31513406-31514198	chr14	+	31513434	31514059	True	NM_014574,NM_001128126	chr14,chr14	-,+	STRN3,AP4S1	-17827,-18809
chr1:196630210-196631731	chr1	+	196630213	196631391	True	NM_001014975,NM_000186,NM_198503	chr1,chr1,chr1	+,+,-	CFH,CFH,KCNT2	-9267,-9267,-52714
chr19:44337424-44338838	chr19	+	44337449	44338672	True	NM_182573,NM_181845	chr19,chr19	-,+	LYPD5,ZNF283	-12641,-6041
chr19:6719194-6719539	chr19	+	6719428	6719572	True	NM_004240,NM_000064	chr19,chr19	+,-	TRIP10,C3	20134,1140
chr4:77018277-77019835	chr4	+	77018280	77019532	True	NM_001179,NM_017426	chr4,chr4	+,-	ART3,NUP54	-22477,50179
chr3:169939336-169939887	chr3	+	169939386	169939928	True	NM_002740,NM_024947	chr3,chr3	+,-	PRKCI,PHC3	291,-39849
chr1:229762455-229762969	chr1	+	229762503	229762916	True	NM_014409,NM_001025247,NM_014777	chr1,chr1,chr1	-,-,+	TAF5L,TAF5L,URB2	-709,-709,-573
chr16:450560-450815	chr16	+	450677	450853	True	NM_020664,NM_021259,NM_005009	chr16,chr16,chr16	+,-,+	DECR2,TMEM8A,NME4	1004,-18727,-3536
chr6:155537100-155537942	chr6	+	155537245	155537959	True	NM_016020,NM_001010927	chr6,chr6	-,+	TFB1M,TIAM2	97708,137
chr12:121032217-121033446	chr12	+	121032219	121033332	True	NM_001033677,NM_198202	chr12,chr12	+,-	CABP1,POP5	45089,-13018
chr5:757387-757808	chr5	+	757434	757790	True	NM_001166260,NM_007030	chr5,chr5	+,-	TRIP13,TPPP	135178,-63924
chr19:2095092-2095408	chr19	+	2095244	2095358	True	NM_130807,NM_001031735,NM_001039846	chr19,chr19,chr19	-,+,+	MOBKL2A,IZUMO4,IZUMO4	961,1509,1509
chr7:98478915-98480076	chr7	+	98479300	98479957	True	NM_003496,NM_152913,NR_037403	chr7,chr7,chr7	+,-,+	TRRAP,TMEM130,MIR3609	-3239,-11627,-79
chr15:73927673-73928223	chr15	+	73927693	73928102	True	NM_017455,NM_001161363,NM_001161364,NM_012428,NM_001024736	chr15,chr15,chr15,chr15,chr15	-,-,-,-,+	NPTN,NPTN,NPTN,NPTN,CD276	-1940,-1940,-1940,-1940,48519
chr16:89990552-89991002	chr16	+	89990729	89991051	True	NM_002386,NM_145039,NM_001197181,NM_006086	chr16,chr16,chr16,chr16	+,-,+,+	MC1R,CENPBD1,TUBB3,TUBB3	-6493,48239,-2363,-1093
chr1:94147529-94148201	chr1	+	94147655	94148037	True	NR_034091,NM_003567	chr1,chr1	+,-	LOC100129046,BCAR3	-90181,-270
chr19:13227300-13227609	chr19	+	13227315	13227625	True	NM_017722,NM_052876,NM_001142554,NM_001136035	chr19,chr19,chr19,chr19	-,+,-,-	TRMT1,NACC1,TRMT1,TRMT1	2,1483,2,-12
chr1:108701548-108702626	chr1	+	108701683	108702039	True	NM_213651,NM_001143987	chr1,chr1	-,+	SLC25A24,NBPF6	33384,290864
chr4:77325966-77326492	chr4	+	77326043	77326523	True	NM_001042784,NM_020859	chr4,chr4	-,+	CCDC158,SHROOM3	1985,29729
chr13:100258733-100259040	chr13	+	100258931	100258995	True	NM_004951,NM_206808	chr13,chr13	-,+	GPR183,CLYBL	-299182,-63
chr6:141183633-141184793	chr6	+	141183863	141184647	True	NR_037441,NM_002511	chr6,chr6	+,-	MIR3668,NMBR	-657539,1225351
chr22:38610918-38611167	chr22	+	38611104	38611190	True	NM_001161573,NM_001199562	chr22,chr22	+,-	MAFF,PLA2G6	-12128,-33268
chr5:63802489-63803623	chr5	+	63802580	63803594	True	NM_001029875,NM_173829	chr5,chr5	+,-	RGS7BP,SREK1IP1	-179,260952
chr1:111833250-111834098	chr1	+	111833363	111833714	True	NM_201653,NM_021797,NM_024901	chr1,chr1,chr1	+,+,-	CHIA,CHIA,DENND2D	14,-2,-90082
chr8:86949005-86949372	chr8	+	86949177	86949336	True	NR_003594,NM_152565	chr8,chr8	-,+	REXO1L2P,ATP6V0D2	-109006,161802
chr11:15734204-15735609	chr11	+	15734295	15735093	True	NM_001145819,NM_001042536	chr11,chr11	-,+	SOX6,INSC	689370,-597862
chr19:39805263-39805523	chr19	+	39805279	39805541	True	NM_172140,NM_020862	chr19,chr19	+,-	IL29,LRFN1	-18365,485
chr17:80800023-80800815	chr17	+	80800037	80800605	True	NM_024702,NM_005993	chr17,chr17	-,+	ZNF750,TBCD	-2106,-90148
chr2:46849363-46849806	chr2	+	46849579	46849652	True	NM_173074,NM_002643,NM_014171	chr2,chr2,chr2	-,-,+	PIGF,PIGF,CRIPT	-5328,-5328,-5311
chr12:8237907-8239132	chr12	+	8237960	8238937	True	NM_004054,NM_015509,NR_024260	chr12,chr12,chr12	-,+,+	C3AR1,NECAP1,NECAP1	-19005,-3212,-3212
chr10:38693094-38694668	chr10	+	38693516	38693912	True	NR_027269,NR_024497	chr10,chr10	-,+	SEPT7L,LOC399744	-1736,23161
chr7:22377245-22379032	chr7	+	22377392	22379012	True	NM_012294,NM_000600	chr7,chr7	-,+	RAPGEF5,IL6	17571,387753
chr3:113771718-113773199	chr3	+	113771742	113773158	True	NM_020817,NM_024638	chr3,chr3	-,+	KIAA1407,QTRTD1	2360,2452
chr4:113200981-113201307	chr4	+	113201179	113201333	True	NM_001102406,NM_052864	chr4,chr4	+,-	ALPK1,TIFA	17165,5776
chr10:22601568-22602748	chr10	+	22601807	22602779	True	NM_001204062,NM_001199938,NM_012071,NM_005180	chr10,chr10,chr10,chr10	+,-,+,+	COMMD3-BMI1,EBLN1,COMMD3,BMI1	2532,-102895,2532,7359
chr6:14867205-14867957	chr6	+	14867204	14867958	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	378568,795388
chr7:99649633-99650398	chr7	+	99650130	99650440	True	NM_145914,NM_017715	chr7,chr7	+,-	ZSCAN21,ZNF3	-2764,28981
chr4:2824255-2824761	chr4	+	2824666	2824790	True	NM_001145856,NM_024309,NM_003023	chr4,chr4,chr4	+,-,+	SH3BP2,TNIP2,SH3BP2	-4805,-66563,-4176
chr1:33721303-33721577	chr1	+	33721475	33721611	True	NM_018207,NM_152493	chr1,chr1	-,+	TRIM62,ZNF362	-73804,562
chr11:62313358-62313821	chr11	+	62313461	62313529	True	NM_001620,NM_000327,NM_024060	chr11,chr11,chr11	-,+,-	AHNAK,ROM1,AHNAK	853,66683,853
chr10:96160195-96161523	chr10	+	96160580	96161375	True	NM_022451,NM_015188	chr10,chr10	-,+	NOC3L,TBC1D12	-37897,810
chr2:225450439-225451019	chr2	+	225450669	225450871	True	NM_022915,NM_003590	chr2,chr2	+,-	MRPL44,CUL3	-628599,-559
chr19:11347655-11348195	chr19	+	11347783	11348175	True	NM_020812,NM_018687	chr19,chr19	-,+	DOCK6,LOC55908	25032,2119
chrX:48271045-48272709	chrX	+	48271283	48272501	True	NM_175729,NM_001040612,NM_005636,NM_001034832	chrX,chrX,chrX,chrX	-,-,-,-	SSX4,SSX4B,SSX4,SSX4B	19,19,19,19
chrX:48271045-48272709	chrX	-	48241810	48243028	False	NM_175729,NM_175711,NM_001040612,NM_005636,NM_001034832	chrX,chrX,chrX,chrX,chrX	+,-,+,+,+	SSX4,SSX3,SSX4B,SSX4,SSX4B	-19,-25668,-19,-19,-19
chr2:183582126-183583014	chr2	+	183582223	183582982	True	NM_018981,NM_001463	chr2,chr2	+,-	DNAJC10,FRZB	-1282,148575
chr16:30660784-30661330	chr16	+	30660820	30661284	True	NM_138447,NM_024031	chr16,chr16	-,+	ZNF689,PRR14	-39138,956
chr16:1479651-1480560	chr16	+	1479878	1480589	True	NM_001010878,NM_016111	chr16,chr16	-,+	C16orf91,TELO2	-533,62762
chr12:110322286-110322896	chr12	+	110322387	110322743	True	NM_016433,NM_001143852	chr12,chr12	-,+	GLTP,TCHP	-4094,15335
chr12:114408083-114409243	chr12	+	114408087	114408696	True	NM_016196,NM_001146699,NM_001146698,NM_138432	chr12,chr12,chr12,chr12	-,-,-,+	RBM19,RBM19,RBM19,SDSL	-3911,-3911,-3911,-547922
chr22:18598041-18598251	chr22	+	18598049	18598251	True	NM_001136004,NM_001193414,NM_018943	chr22,chr22,chr22	-,+,+	MICAL3,TUBA8,TUBA8	-90724,-4647,-4647
chr17:46671928-46672206	chr17	+	46672029	46672193	True	NR_033204,NR_033205,NR_033202,NR_033203,NR_033201,NM_002147	chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,-	LOC404266,LOC404266,LOC404266,LOC404266,LOC404266,HOXB5	-2398,1126,-4238,-2426,-4257,-926
chr11:843913-844206	chr11	+	844009	844193	True	NM_003271,NM_021128,NM_001025239,NM_001025238,NM_001025235,NM_001025234,NM_001025237,NM_001025236	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,-,+,+,+,+,+,+	TSPAN4,POLR2L,TSPAN4,TSPAN4,TSPAN4,TSPAN4,TSPAN4,TSPAN4	-1236,-1480,-1236,-1236,-1119,17,252,-1119
chr19:51539172-51540374	chr19	+	51539203	51540056	True	NM_145894,NM_145895,NM_001136032,NM_019598,NM_001167605,NM_006853,NM_144947,NM_014441	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,+	KLK12,KLK12,KLK11,KLK12,KLK11,KLK11,KLK11,SIGLEC9	-1055,-1055,-9331,-1055,-7913,-7913,-8318,88080
chr16:15070089-15070411	chr16	+	15070092	15070452	True	NM_015027,NM_173474	chr16,chr16	+,-	PDXDC1,NTAN1	-1321,79431
chr16:15070089-15070411	chr16	-	70098463	70098643	False	NR_036265,NR_003610	chr16,chr16	+,-	MIR1972-2,PDXDC2P	-34265,1269
chr19:53497847-53498094	chr19	+	53497949	53498013	True	NM_152473,NR_003578	chr19,chr19	+,-	HERV-V1,ZNF702P	19330,-1165
chr2:119607879-119608284	chr2	+	119607975	119608284	True	NM_001426,NM_006770	chr2,chr2	-,+	EN1,MARCO	-2216,91460
chr22:39240535-39241243	chr22	+	39240611	39241234	True	NM_014293,NM_145699	chr22,chr22	-,+	NPTXR,APOBEC3A	-594,112292
chr22:21399661-21399997	chr22	+	21399671	21400031	True	NR_002829,NR_027006	chr22,chr22	-,+	P2RX6P,LOC400891	-1133,217
chr1:197011804-197013134	chr1	+	197012009	197013080	True	NM_030787,NM_001994	chr1,chr1	+,-	CFHR5,F13B	-65393,23376
chr11:34938026-34938263	chr11	+	34938149	34938263	True	NM_015957,NM_003477,NM_001166158,NM_001135024	chr11,chr11,chr11,chr11	-,+,+,+	APIP,PDHX,PDHX,PDHX	-210,-523,-523,-523
chr2:128282206-128282555	chr2	+	128282345	128282411	True	NM_017969,NM_001080527	chr2,chr2	-,+	IWS1,MYO7B	1728,10966
chr6:101849077-101849818	chr6	+	101849081	101849623	True	NM_022091,NM_001166247,NM_021956,NM_175768	chr6,chr6,chr6,chr6	-,+,+,+	ASCC3,GRIK2,GRIK2,GRIK2	-519857,-2281,-2281,-2281
chr19:50554910-50556739	chr19	+	50555501	50556597	True	NM_016440,NR_027257	chr19,chr19	-,+	VRK3,FLJ26850	-26696,-1615
chr5:81601421-81602637	chr5	+	81601433	81602303	True	NM_001017971,NM_001025	chr5,chr5	+,-	ATP6AP1L,RPS23	-327,-27198
chrX:73164143-73164388	chrX	+	73164166	73164358	True	NR_001564,NR_024582	chrX,chrX	-,+	XIST,NCRNA00183	-91578,-58
chr8:114325375-114325641	chr8	+	114325377	114325495	True	NR_031745,NM_198124	chr8,chr8	+,-	MIR2053,CSMD3	-669709,63947
chr17:49200051-49200877	chr17	+	49200354	49200676	True	NM_001130528,NM_001018136,NM_003971	chr17,chr17,chr17	-,+,-	SPAG9,NME1-NME2,SPAG9	-2128,30220,-2128
chr19:36979443-36979952	chr19	+	36979540	36979992	True	NM_001145344,NM_001145345,NM_001145343,NR_036504,NM_032838	chr19,chr19,chr19,chr19,chr19	-,-,-,+,-	ZNF566,ZNF566,ZNF566,LOC728752,ZNF566	521,521,521,536,395
chr11:34073769-34074010	chr11	+	34073844	34074048	True	NM_203364,NM_005574,NM_005898	chr11,chr11,chr11	+,-,+	CAPRIN1,LMO2,CAPRIN1	-665,-160008,-665
chr22:37308421-37309044	chr22	+	37308535	37309085	True	NM_000395,NM_002854	chr22,chr22	+,-	CSF2RB,PVALB	589,-93018
chr6:24774518-24775230	chr6	+	24774617	24775222	True	NM_030939,NM_015895	chr6,chr6	-,+	C6orf62,GMNN	-55214,-59
chr8:37655863-37656321	chr8	+	37655870	37656266	True	NR_003671,NM_032777	chr8,chr8	-,+	LOC728024,GPR124	-50306,-1520
chr1:224367003-224368317	chr1	+	224367273	224367449	True	NM_003676,NR_031574	chr1,chr1	+,-	DEGS1,MIR320B2	3478,77446
chr19:7597920-7598301	chr19	+	7597954	7598282	True	NM_080662,NM_001166112,NM_001166113,NM_001166111,NM_006702,NM_001166114	chr19,chr19,chr19,chr19,chr19,chr19	-,+,+,+,+,+	PEX11G,PNPLA6,PNPLA6,PNPLA6,PNPLA6,PNPLA6	-44049,845,1353,1308,755,2306
chr16:68057291-68058159	chr16	+	68057444	68057944	True	NM_017803,NM_018380	chr16,chr16	+,-	DUS2L,DDX28	-291,24
chr8:135800882-135801939	chr8	+	135800897	135801968	True	NR_029666,NR_002438	chr8,chr8	-,+	MIR30B,ZFAT-AS1	10932,-190637
chr9:95221194-95222609	chr9	+	95221475	95222137	True	NM_001193335,NM_001012267	chr9,chr9	-,+	ASPN,CENPP	22765,-133785
chr17:26369183-26370061	chr17	+	26369503	26369965	True	NM_001076680,NM_016231	chr17,chr17	-,+	C17orf108,NLK	-149094,34
chr2:130737641-130738210	chr11	-	73390739	73418488	True	NM_001130036,NM_002869	chr11,chr11	+,-	PLEKHB1,RAB6A	-58754,81462
chr2:130737641-130738210	chr2	+	130737747	130738209	False	NR_036537,NM_032144	chr2,chr2	-,+	LOC100131320,RAB6C	-12,-563
chr11:63999912-64000353	chr11	+	63999930	64000342	True	NM_031472,NM_057092,NM_001160389,NM_001033678,NM_032344,NM_005528,NM_004470,NM_003377,NM_001160392,NM_001160393,NM_001160390,NM_001128613,NM_001128612,NM_001135208	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,+,-,-,+,+,+,+,-,-,-,+,+,+	TRPT1,FKBP2,TRPT1,TRPT1,NUDT22,DNAJC4,FKBP2,VEGFB,TRPT1,TRPT1,TRPT1,NUDT22,NUDT22,FKBP2	-6204,9245,-6204,-6204,-6243,-2228,8070,1923,-6204,-6589,-6204,-6243,-6243,8261
chr10:71989823-71991245	chr10	+	71989960	71991024	True	NM_021129,NM_004096	chr10,chr10	-,+	PPA1,EIF4EBP2	2221,172836
chr11:64684338-64684618	chr11	+	64684445	64684583	True	NM_015104,NM_006244	chr11,chr11	-,+	ATG2A,PPP2R5B	189,7559
chr11:118214008-118214228	chr11	+	118214036	118214188	True	NM_000073,NM_001040651,NM_000732	chr11,chr11,chr11	+,-,-	CD3G,CD3D,CD3D	870,-577,-577
chr16:89239189-89239576	chr16	+	89239230	89239308	True	NM_004933,NM_005187	chr16,chr16	+,-	CDH15,CBFA2T3	-1118,-195726
chr6:37466317-37466789	chr6	+	37466662	37466786	True	NM_015050,NM_138493	chr6,chr6	+,-	FTSJD2,C6orf129	-65806,964
chr12:49249286-49249817	chr12	+	49249634	49249726	True	NM_004818,NM_014470,NM_000725	chr12,chr12,chr12	-,-,+	DDX23,RND1,CACNB3	-3677,9989,-37182
chr15:25683099-25683306	chr15	+	25683098	25683162	True	NM_130839,NR_001295	chr15,chr15	-,+	UBE3A,SNORD109A	1016,-159659
chr19:55574669-55575063	chr19	+	55574681	55574925	True	NR_027382,NM_001145971,NR_027381,NM_138412,NM_133180	chr19,chr19,chr19,chr19,chr19	-,-,-,-,+	RDH13,RDH13,RDH13,RDH13,EPS8L1	-96,-96,-96,6039,12295
chr1:203592507-203594171	chr1	+	203592736	203593851	True	NM_002023,NM_001684,NM_001001396	chr1,chr1,chr1	-,+,+	FMOD,ATP2B4,ATP2B4	-272447,2076,2076
chr17:45253369-45254662	chr17	+	45253418	45254502	True	NM_001114091,NM_001002841	chr17,chr17	-,+	CDC27,MYL4	12217,31925
chr12:27615990-27616356	chr12	+	27616000	27616189	True	NM_001145010,NM_001146221	chr12,chr12	+,-	C12orf70,LOC100287284	3553,308073
chr6:3849026-3849379	chr6	+	3849032	3849330	True	NM_183373,NM_012135	chr6,chr6	-,+	C6orf145,FAM50B	-96786,301
chr1:150776535-150776998	chr1	+	150776622	150776996	True	NM_000396,NM_001145415	chr1,chr1	-,+	CTSK,SETDB1	3971,121818
chr5:92915531-92915746	chr5	+	92915558	92915740	True	NR_021490,NR_021491,NR_015369,NM_005654	chr5,chr5,chr5,chr5	-,-,-,+	FLJ42709,FLJ42709,FLJ42709,NR2F1	1313,1263,-9059,3302
chr3:63848762-63849025	chr3	+	63848762	63848888	True	NM_025075,NM_000333	chr3,chr3	-,+	THOC7,ATXN7	759,1344
chr1:68918481-68918912	chr1	+	68918491	68918959	True	NM_000329,NM_001924	chr1,chr1	-,+	RPE65,GADD45A	-2849,-767689
chr17:55038106-55038454	chr17	+	55038218	55038386	True	NM_004645,NM_021626	chr17,chr17	-,+	COIL,SCPEP1	75,17081
chr12:53098063-53098558	chr12	+	53098251	53098596	True	NM_199187,NM_175078	chr12,chr12	+,-	KRT18,KRT77	244058,-1004
chrY:15590912-15591347	chrY	+	15591085	15591297	True	NM_007125,NM_182659,NM_182660,NM_004202	chrY,chrY,chrY,chrY	-,-,-,+	UTY,UTY,UTY,TMSB4Y	1303,1303,1303,224149
chr13:76049066-76050924	chr13	+	76049119	76050938	True	NM_014832,NM_006002	chr13,chr13	-,+	TBC1D4,UCHL3	5363,72988
chr9:96717862-96718121	chr9	+	96717957	96718151	True	NM_177995,NM_021570	chr9,chr9	+,-	PTPDC1,BARX1	74924,-349
chr8:42010204-42010522	chr8	+	42010343	42010513	True	NM_006803,NM_001134296,NM_000930	chr8,chr8,chr8	+,+,-	AP3M2,AP3M2,PLAT	16,16,54731
chr1:204015119-204016423	chr1	+	204015237	204015989	True	NM_005686,NR_027902	chr1,chr1	+,-	SOX13,C1orf157	26256,-4845
chr12:10766290-10766564	chr12	+	10766294	10766581	True	NM_007334,NM_018048	chr12,chr12	+,-	KLRD1,MAGOHB	-305928,-86
chr5:39058608-39059408	chr5	+	39058787	39059450	True	NM_003999,NM_152756	chr5,chr5	+,-	OSMR,RICTOR	-212750,15103
chr11:300511-300909	chr11	+	300537	300949	True	NM_006435,NM_001025295	chr11,chr11	+,-	IFITM2,IFITM5	7157,-1011
chr18:61262853-61264278	chr18	+	61263229	61264256	True	NM_012397,NM_002974	chr18,chr18	+,-	SERPINB13,SERPINB4	-8746,47297
chr5:153785260-153786076	chr5	+	153785447	153786049	True	NR_037897,NM_001131062	chr5,chr5	-,+	FLJ38109,SAP30L	39383,39467
chr19:44031400-44031789	chr19	+	44031499	44031657	True	NM_014297,NM_174945	chr19,chr19	-,+	ETHE1,ZNF575	-103,5682
chr4:3441561-3442029	chr4	+	3441607	3442025	True	NM_002337,NM_001528	chr4,chr4	-,+	LRPAP1,HGFAC	92249,1700
chr9:95738084-95738756	chr9	+	95738093	95738342	True	NM_031486,NM_033086	chr9,chr9	-,+	ZNF484,FGD3	-97803,-1426
chr5:124189905-124191811	chr5	+	124190106	124191514	True	NM_004384,NM_020747	chr5,chr5	+,-	CSNK1G3,ZNF608	-1342375,-109301
chr12:111181025-111181514	chr12	+	111181028	111181450	True	NM_152591,NM_002710	chr12,chr12	+,-	CCDC63,PPP1CC	103360,-271
chr11:125932929-125933372	chr11	+	125933010	125933386	True	NM_016952,NM_024556	chr11,chr11	-,+	CDON,FAM118B	19,148232
chr1:161226750-161227913	chr1	+	161226776	161227743	True	NM_001077469,NM_001102566	chr1,chr1	-,+	NR1I3,PCP4L1	-18776,773
chr15:101792912-101793769	chr15	+	101792942	101793772	True	NM_014918,NM_024652	chr15,chr15	-,+	CHSY1,LRRK1	-805,-333536
chr5:137475715-137476864	chr5	+	137475774	137476663	True	NM_003551,NM_005733	chr5,chr5	-,+	NME5,KIF20A	-642,37753
chr19:23405793-23407069	chr19	+	23405793	23406898	True	NR_003662,NM_003430	chr19,chr19	+,-	RPSAP58,ZNF91	538917,171430
chr8:23349736-23350410	chr8	+	23350128	23350454	True	NM_016612,NM_001128930	chr8,chr8	+,-	SLC25A37,ENTPD4	35908,-34884
chr9:35753251-35754419	chr9	+	35753389	35754420	True	NM_020944,NM_001080496,NM_001044264	chr9,chr9,chr9	-,+,-	GBA2,RGP1,MSMP	-4164,-4163,95
chr17:36763045-36763337	chr17	+	36763189	36763279	True	NM_025248,NM_005937	chr17,chr17	-,+	SRCIN1,MLLT6	-1006,98593
chr12:133002365-133002806	chr12	+	133002391	133002825	True	NM_001142641,NM_001122636	chr12,chr12	+,-	FBRSL1,GALNT9	64331,-96486
chr1:202613649-202613915	chr1	+	202613713	202613787	True	NM_001136504,NM_001197131	chr1,chr1	-,+	SYT2,PPP1R12B	-1132,-104522
chr2:136745962-136747246	chr2	+	136746129	136747221	True	NM_001349,NM_014607	chr2,chr2	-,+	DARS,UBXN4	-2907,-247004
chr1:31228536-31228775	chr1	+	31228559	31228729	True	NM_006762,NR_034182	chr1,chr1	-,+	LAPTM5,LOC100129196	2004,-36991
chr17:36883315-36883902	chr17	+	36883417	36883744	True	NM_007144,NM_001136498	chr17,chr17	-,+	PCGF2,CISD3	20875,2765
chr8:144716310-144716653	chr8	+	144716452	144716640	True	NM_001082480,NM_003313	chr8,chr8	+,-	ZNF623,TSTA3	1732,-16720
chr20:825557-825844	chr20	+	825560	825796	True	NM_031424,NM_207121,NM_015985	chr20,chr20,chr20	+,+,-	FAM110A,FAM110A,ANGPT4	-326,-8900,71214
chr8:144120890-144121163	chr8	+	144121078	144121140	True	NR_026913,NM_173687	chr8,chr8	-,+	LOC100133669,C8orf31	-21271,-450
chr6:13574032-13574294	chr6	+	13574132	13574332	True	NM_018988,NM_012241,NM_031244,NM_001193267	chr6,chr6,chr6,chr6	-,+,+,+	GFOD1,SIRT5,SIRT5,SIRT5	-86345,542,459,459
chr14:91590909-91591623	chr14	+	91590940	91591442	True	NR_003709,NM_182398	chr14,chr14	+,-	SNORA11B,RPS6KA5	1327,-63947
chr20:36149310-36149889	chr20	+	36149421	36149927	True	NM_005386,NM_001167821,NM_001167820,NM_001167823,NM_001167822,NM_006698,NM_181689	chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,-,-,-,-,-,+	NNAT,BLCAP,BLCAP,BLCAP,BLCAP,BLCAP,NNAT	-117,6257,6456,3076,6206,6456,-117
chr17:3378874-3379529	chr17	+	3378899	3379565	True	NM_001170696,NM_001170697,NM_001170695,NM_001170698,NM_001170699,NM_000049,NM_032598,NM_001128085	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,+,-,+	SPATA22,SPATA22,SPATA22,SPATA22,SPATA22,ASPA,SPATA22,ASPA	-3757,-3773,-3757,-3800,-3832,12,-3858,-1546
chr1:110751385-110752293	chr1	+	110751435	110752293	True	NR_036437,NM_001039574,NR_036595,NM_004978	chr1,chr1,chr1,chr1	+,+,-,+	KCNC4,KCNC4,LOC440600,KCNC4	1042,1042,129550,1042
chr7:150330432-150331906	chr7	+	150330880	150331690	True	NM_024711,NM_015660,NR_024115	chr7,chr7,chr7	-,+,-	GIMAP6,GIMAP2,GIMAP6	-1200,51103,-1200
chr6:107077607-107077853	chr6	+	107077619	107077877	True	NM_032730,NM_018292	chr6,chr6	-,+	RTN4IP1,QRSL1	-246,-229
chr1:32715189-32716805	chr1	+	32715412	32716435	True	NM_032648,NR_026850,NM_005356	chr1,chr1,chr1	+,-,+	FAM167B,MTMR9LP,LCK	-2645,-8101,404
chr1:38483900-38484962	chr1	+	38484037	38484921	True	NM_004468,NM_016037	chr1,chr1	-,+	FHL3,UTP11L	-12803,-5704
chrX:73629413-73630216	chrX	+	73629568	73630096	True	NM_006517,NR_028379	chrX,chrX	+,-	SLC16A2,MIR374AHG	10988,-116159
chr7:128117286-128118774	chr7	+	128117320	128118193	True	NM_183243,NM_018396	chr7,chr7	-,+	IMPDH1,METTL2B	-67284,-588
chr3:196693468-196693708	chr3	+	196693614	196693738	True	NR_024388,NM_025163	chr3,chr3	+,-	LOC152217,PIGZ	-24171,2016
chr5:99879434-99880027	chr5	+	99879539	99880003	True	NR_027503,NM_198507	chr5,chr5	-,+	LOC100133050,FAM174A	-155581,-8474
chr4:5053733-5055429	chr4	+	5053815	5055414	True	NM_018659,NM_018401	chr4,chr4	-,+	CYTL1,STK32B	-32618,-339
chr9:26948758-26949103	chr9	+	26948761	26949085	True	NM_001099224,NM_001031689,NM_025103,NM_001099223,NM_001099222	chr9,chr9,chr9,chr9,chr9	+,-,+,+,+	IFT74,PLAA,IFT74,IFT74,IFT74	7285,-1293,7285,-1785,-1512
chr5:170849363-170849772	chr5	+	170849371	170849771	True	NM_003862,NR_037474	chr5,chr5	+,-	FGF18,MIR3912	-2757,-35607
chr9:96340784-96341467	chr9	+	96340876	96341434	True	NM_198841,NM_005392	chr9,chr9	-,+	FAM120AOS,PHF2	-125002,-2018
chr11:75063292-75063557	chr11	+	75063355	75063591	True	NM_020251,NM_004041,NM_001005	chr11,chr11,chr11	-,-,+	ARRB1,ARRB1,RPS3	-480,-480,46970
chr6:105409568-105411012	chr6	+	105409811	105410901	True	NM_001004317,NM_020771	chr6,chr6	+,-	LIN28B,HACE1	-4943,-102017
chr3:63801048-63801559	chr3	+	63801052	63801414	True	NR_026866,NM_025075	chr3,chr3	+,-	C3orf49,THOC7	3626,48235
chr19:55221040-55221486	chr19	+	55221092	55221456	True	NR_003061,NM_145057	chr19,chr19	+,-	LILRP2,CDC42EP5	-1542,-236670
chr9:2014673-2015034	chr9	+	2014692	2015080	True	NM_139045,NR_015375,NM_003070	chr9,chr9,chr9	+,-,+	SMARCA2,FLJ35024,SMARCA2	261,607343,261
chr15:90359942-90360648	chr15	+	90359965	90360453	True	NM_001039958,NM_001150	chr15,chr15	+,-	MESP2,ANPEP	-40427,-1893
chr5:16616181-16616406	chr5	+	16616212	16616426	True	NM_001034850,NM_006317	chr5,chr5	-,+	FAM134B,BASP1	742,601323
chr4:48491673-48491892	chr4	+	48491714	48491884	True	NM_175619,NM_152679,NM_003215	chr4,chr4,chr4	+,+,-	ZAR1,SLC10A4,TEC	424,-6405,-219900
chr19:18745964-18746519	chr19	+	18745968	18746560	True	NM_004750,NM_018316	chr19,chr19	-,+	CRLF1,KLHL26	-28308,1277
chr1:2487812-2488085	chr1	+	2487944	2488100	True	NR_037844,NR_026927,NM_003820	chr1,chr1,chr1	-,-,+	LOC100133445,LOC115110,TNFRSF14	400,-3660,-190
chr16:578388-578631	chr16	+	578388	578614	True	NM_005632,NR_024121	chr16,chr16	+,-	SOLH,NCRNA00235	-583,-981
chr19:35980591-35981331	chr19	+	35980620	35981356	True	NM_005306,NM_207392	chr19,chr19	+,-	FFAR2,KRTDAP	-40054,50
chr6:36511135-36512786	chr6	+	36511196	36512743	True	NM_003017,NM_007271	chr6,chr6	+,-	SRSF3,STK38	49346,2560
chr7:150103359-150104408	chr7	+	150103546	150104405	True	NR_027237,NM_002889	chr7,chr7	+,-	LOC728743,RARRES2	-764,-64783
chr15:79163737-79164225	chr15	+	79163901	79164184	True	NM_014272,NM_206839,NM_006791	chr15,chr15,chr15	-,+,+	ADAMTS7,MORF4L1,MORF4L1	-60128,987,987
chr18:3243671-3245084	chr18	+	3243729	3245059	True	NM_019856,NM_006471	chr18,chr18	-,+	MYOM1,MYL12A	-23623,2468
chr9:38067466-38067682	chr9	+	38067469	38067665	True	NM_003028,NM_024345	chr9,chr9	-,+	SHB,DCAF10	1595,-266730
chrX:71521807-71522610	chrX	+	71521838	71522534	True	NM_004143,NM_001170747,NM_001144885,NM_001144886,NM_001144887	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	CITED1,PIN4,CITED1,CITED1,CITED1	4353,-120363,3280,4553,3280
chr17:39018411-39020051	chr17	+	39018970	39020032	True	NM_000223,NM_001195386	chr17,chr17	-,+	KRT12,TMEM99	3480,-43585
chr7:100890617-100891294	chr7	+	100890780	100891166	True	NM_016068,NM_006349,NM_014343,NM_001185080	chr7,chr7,chr7,chr7	-,+,-,-	FIS1,ZNHIT1,CLDN15,CLDN15	-2409,-29847,-9553,-8679
chr12:48295336-48295711	chr12	+	48295339	48295679	True	NM_001143841,NM_000376,NM_001017536,NM_001017535	chr12,chr12,chr12,chr12	+,-,-,-	TMEM106C,VDR,VDR,VDR	61650,3185,3185,3185
chr9:110046266-110048052	chr9	+	110046379	110048006	True	NR_031752,NM_002874	chr9,chr9	-,+	MIR548Q,RAD23B	-197663,-886
chr11:62390814-62391293	chr11	+	62390903	62391270	True	NM_012200,NM_000327	chr11,chr11	-,+	B3GAT3,ROM1	-1455,-10741
chr9:137006262-137007194	chr9	+	137006569	137007181	True	NR_023344,NM_017588,NM_052821	chr9,chr9,chr9	-,+,+	RNU6ATAC,WDR5,WDR5	22555,-5410,-1706
chr6:74172905-74173554	chr6	+	74173055	74173453	True	NM_001123226,NM_012123,NM_133645,NM_138441	chr6,chr6,chr6,chr6	+,+,+,-	MTO1,MTO1,MTO1,MB21D1	-1653,-1653,-1653,-11012
chr1:226491600-226492725	chr1	+	226491651	226492507	True	NM_173083,NM_031944	chr1,chr1	-,+	LIN9,MIXL1	4741,-80327
chr3:125093918-125094205	chr3	+	125093932	125094204	True	NM_021964,NR_024250	chr3,chr3	-,+	ZNF148,LOC100125556	44,541239
chr10:99257957-99258223	chr10	+	99257997	99258227	True	NM_022362,NM_024954	chr10,chr10	-,+	MMS19,UBTD1	189,540
chr3:58654219-58654826	chr3	+	58654227	58654800	True	NM_138805,NM_153331	chr3,chr3	-,+	FAM3D,KCTD6	-1666,-170186
chr9:90589265-90589548	chr9	+	90589279	90589539	True	NM_001039803,NM_001145124,NM_001170640,NM_178432,NM_001170639,NM_012119	chr9,chr9,chr9,chr9,chr9,chr9	-,+,-,-,-,-	CDK20,FAM75C1,CDK20,CDK20,CDK20,CDK20	206,-56453,206,206,206,206
chr2:107111130-107111707	chr2	+	107111273	107111695	True	NM_001144013,NR_003506	chr2,chr2	-,+	RGPD3,PLGLA	-26472,-108563
chr2:107111130-107111707	chr2	-	87081225	87081445	False	NR_037931,NM_172101,NM_172102,NM_001178100,NM_172213,NM_004931	chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-	LOC100286979,CD8B,CD8B,CD8B,CD8B,CD8B	7502,7652,7652,7652,7652,7652
chr4:56263111-56263327	chr4	+	56263111	56263349	True	NM_018475,NR_037969	chr4,chr4	+,-	TMEM165,LOC100506462	-1072,-11364
chr2:54786353-54786594	chr2	+	54786397	54786648	True	NM_178313,NM_001003937	chr2,chr2	+,-	SPTBN1,TSPYL6	-917,-302988
chr3:193920018-193921363	chr3	+	193920018	193921270	True	NR_024480,NM_005524	chr3,chr3	-,+	LOC100131551,HES1	109373,-66141
chr2:234216353-234216632	chr2	+	234216363	234216493	True	NM_000541,NM_018218	chr2,chr2	+,-	SAG,USP40	-105,257793
chr4:187071160-187071664	chr4	+	187071187	187071521	True	NM_001006655,NM_015398,NM_021069	chr4,chr4,chr4	+,+,-	FAM149A,FAM149A,SORBS2	-911,-5243,-193317
chr12:56112818-56114179	chr12	+	56112944	56114189	True	NM_001780,NM_001144997,NR_037656,NR_037658,NM_001040034,NR_037655,NR_037657,NM_001487,NM_002905,NM_001199771	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,-,+,+,-,+,+,+,+,+	CD63,ITGA7,BLOC1S1,BLOC1S1-RDH5,CD63,BLOC1S1,BLOC1S1,BLOC1S1,RDH5,RDH5	8771,-6855,-2919,-3177,8771,-3177,-2919,-3177,-39,-39
chr2:239049259-239049517	chr2	+	239049311	239049511	True	NM_198582,NM_030768	chr2,chr2	+,-	KLHL30,ILKAP	-1999,62863
chr9:124920467-124921494	chr9	+	124920512	124921528	True	NM_198469,NM_014222	chr9,chr9	+,-	MORN5,NDUFA8	661,620
chr7:65669361-65670050	chr7	+	65669494	65669918	True	NR_026873,NM_003596	chr7,chr7	-,+	NCRNA00174,TPST1	195528,340
chr11:102571589-102573229	chr11	+	102571595	102573202	True	NM_001166,NM_022122	chr11,chr11	+,-	BIRC2,MMP27	-353687,3323
chr8:18041540-18042785	chr8	+	18041565	18042809	True	NM_004315,NM_001160179	chr8,chr8	-,+	ASAH1,NAT1	-99058,-13645
chr2:23676521-23676857	chr2	+	23676520	23676895	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	473089,-68273
chr8:86102208-86102829	chr8	+	86102261	86102641	True	NM_001083589,NM_001099670	chr8,chr8	+,-	E2F5,C8orf59	-2410,30053
chr1:179260257-179262114	chr1	+	179260596	179261947	True	NM_001136001,NM_003101	chr1,chr1	-,+	ABL2,SOAT1	-61777,1069
chr8:23146334-23146561	chr8	+	23146360	23146609	True	NM_001136108,NM_003844	chr8,chr8	+,-	R3HCC1,TNFRSF10A	-799,-63680
chr7:63024243-63025412	chr7	+	63024433	63025433	True	NR_028349,NR_036246	chr7,chr7	-,+	LOC100287834,MIR4283-1	-165014,56034
chr7:63024243-63025412	chr7	-	57079639	57080523	False	NR_036270,NR_036102	chr7,chr7	-,+	MIR4283-2,MIR3147	-56068,392207
chr21:44587562-44588149	chr21	+	44587566	44588186	True	NM_006758,NM_000394	chr21,chr21	-,+	U2AF1,CRYAA	-59878,954
chr4:25254255-25255484	chr4	+	25254543	25255367	True	NM_018323,NM_016955	chr4,chr4	+,-	PI4K2B,SEPSECS	-18953,-92339
chr19:6372483-6372823	chr19	+	6372547	6372785	True	NM_004158,NM_032306	chr19,chr19	-,+	PSPN,ALKBH7	3125,-154
chr17:8658278-8658882	chr17	+	8658284	8658909	True	NM_004822,NM_001128076	chr17,chr17	+,-	NTN1,SPDYE4	265949,3018
chr9:95091757-95092831	chr9	+	95092399	95092870	True	NR_024020,NM_001012267,NM_017948	chr9,chr9,chr9	-,+,-	NOL8,CENPP,NOL8	-4523,-4709,-4523
chr2:202646031-202647129	chr2	+	202646146	202646975	True	NM_001135745,NM_139158,NM_020919	chr2,chr2,chr2	-,+,-	ALS2,CDK15,ALS2	-251,24222,-251
chr19:17981182-17981610	chr19	+	17981198	17981308	True	NR_000012,NM_000215,NM_000453	chr19,chr19,chr19	+,-,+	SNORA68,JAK3,SLC5A5	-7852,-22357,1473
chr9:139607382-139607622	chr9	+	139607492	139607554	True	NM_152421,NR_002975	chr9,chr9	+,-	FAM69B,SNORA43	-519,13185
chr16:49317479-49317732	chr16	+	49317599	49317691	True	NM_144602,NM_004352	chr16,chr16	+,-	C16orf78,CBLN1	90116,-1857
chr15:93017638-93018966	chr15	+	93017662	93018938	True	NR_021493,NM_153040	chr15,chr15	-,+	LOC100144604,C15orf32	96605,-2813
chr19:51325101-51326815	chr19	+	51325607	51326559	True	NM_033068,NM_001030050,NM_002257,NM_138564,NM_138563,NM_017509	chr19,chr19,chr19,chr19,chr19,chr19	+,+,-,-,-,-	ACPT,KLK3,KLK1,KLK15,KLK15,KLK15	-31986,31611,534,8270,8270,8270
chr6:43267185-43268120	chr6	+	43267292	43268065	True	NM_006672,NM_153320,NM_206922	chr6,chr6,chr6	+,+,-	SLC22A7,SLC22A7,CRIP3	-1345,-1345,8522
chr1:156863912-156864351	chr1	+	156863987	156864263	True	NM_014215,NM_001080471	chr1,chr1	-,+	INSRR,PEAR1	-35275,-515
chr11:17247943-17248774	chr11	+	17248041	17248574	True	NM_002645,NM_005013	chr11,chr11	-,+	PIK3C2A,NUCB2	-56687,49711
chr14:21419904-21421015	chr14	+	21420420	21421057	True	NM_002934,NM_201538	chr14,chr14	+,-	RNASE2,NDRG2	2572,72258
chr11:94950738-94951905	chr11	+	94950866	94951546	True	NM_144665,NM_015036	chr11,chr11	-,+	SESN3,ENDOD1	12750,-127943
chr19:58458300-58458570	chr19	+	58458439	58458543	True	NR_036508,NM_005773	chr19,chr19	+,-	LOC100128398,ZNF256	55718,584
chr10:64888858-64889960	chr10	+	64889014	64889955	True	NM_004241,NM_030759	chr10,chr10	-,+	JMJD1C,NRBF2	139079,3051
chr5:141025659-141026932	chr5	+	141025858	141026876	True	NM_033449,NM_001130029,NM_173828,NM_003883	chr5,chr5,chr5,chr5	-,+,+,-	FCHSD1,RELL2,RELL2,HDAC3	4160,-9399,-9399,-9435
chr7:44059294-44059951	chr7	+	44059293	44059951	True	NR_015401,NM_175064,NR_003655	chr7,chr7,chr7	+,+,-	FLJ35390,SPDYE1,POLR2J4	18746,-18855,-545
chr7:44059294-44059951	chr7	+	102312640	102312702	False	NM_032959,NM_001166339	chr7,chr7	-,+	POLR2J2,SPDYE2L	-458,-21919
chr7:44059294-44059951	chr7	+	102119910	102119972	False	NM_006234,NM_152892	chr7,chr7	-,+	POLR2J,LRWD1	-529,-14571
chr7:44059294-44059951	chr7	+	102213567	102213629	False	NM_001166339,NM_001097615	chr7,chr7	+,-	SPDYE2L,POLR2J3	-21939,-499
chr6:13321081-13322363	chr6	+	13321087	13322007	True	NM_001143966,NM_001143964,NM_001143965,NM_016495,NM_031244	chr6,chr6,chr6,chr6,chr6	-,-,-,-,+	TBC1D7,TBC1D7,TBC1D7,TBC1D7,SIRT5	6830,6830,6830,6830,252784
chr19:36630482-36630816	chr19	+	36630500	36630838	True	NM_001003962,NM_001864,NM_001749	chr19,chr19,chr19	+,-,+	CAPNS1,COX7A1,CAPNS1	79,12983,79
chr19:56923232-56924968	chr19	+	56923483	56924969	True	NM_001159860,NM_001159861,NM_152478,NM_144690	chr19,chr19,chr19,chr19	+,+,+,-	ZNF583,ZNF583,ZNF583,ZNF582	-8151,-7816,-7840,-18594
chr2:9142222-9143140	chr2	+	9142302	9143060	True	NM_001135191,NM_138799	chr2,chr2	+,-	ASAP2,MBOAT2	203833,866
chr13:21750702-21751002	chr13	+	21750722	21751044	True	NM_001166017,NM_145061,NM_024026	chr13,chr13,chr13	-,-,+	SKA3,SKA3,MRP63	19,19,-401
chr11:33916868-33918135	chr11	+	33917091	33918027	True	NM_203364,NM_005574	chr11,chr11	+,-	CAPRIN1,LMO2	155202,-3255
chr10:16859949-16861348	chr10	+	16859994	16861381	True	NM_012425,NM_030664,NM_152724	chr10,chr10,chr10	-,+,-	RSU1,PTER,RSU1	-541,-381083,-541
chr5:151069076-151069618	chr5	+	151069530	151069673	True	NM_003118,NM_005754	chr5,chr5	-,+	SPARC,G3BP1	-3013,81802
chr6:110534683-110535174	chr6	+	110534755	110535223	True	NM_003931,NM_015891	chr6,chr6	-,+	WASF1,CDC40	-33548,-33191
chr4:88233931-88234748	chr4	+	88234246	88234760	True	NM_001136230,NM_178135,NM_024047	chr4,chr4,chr4	-,-,+	HSD17B13,HSD17B13,NUDT9	9346,9346,108974
chr14:69448647-69450498	chr14	+	69448776	69450029	True	NM_001130004,NM_001193360,NM_001130005,NM_001102	chr14,chr14,chr14,chr14	-,+,-,-	ACTN1,EXD2,ACTN1,ACTN1	-2693,208164,-2693,-2693
chr13:25745339-25745594	chr13	+	25745395	25745636	True	NM_199138,NM_152704,NM_030979	chr13,chr13,chr13	-,-,+	FAM123A,FAM123A,PABPC3	271,271,-75170
chr1:193091467-193091982	chr1	+	193091584	193091911	True	NM_024529,NM_016066	chr1,chr1	+,-	CDC73,GLRX2	-550,-16340
chr17:4844269-4844974	chr17	+	4844359	4844951	True	NM_001165418,NM_053013,NM_005022,NM_001165417,NM_003562,NM_001193503,NM_001976,NM_000173,NM_015528	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,-,-,-,+,+,+,+	SLC25A11,ENO3,PFN1,SLC25A11,SLC25A11,ENO3,ENO3,GP1BA,RNF167	-897,9432,6924,-897,-897,9432,9432,-8818,-780
chr7:121535804-121536681	chr7	+	121535876	121536602	True	NM_002851,NM_005763	chr7,chr7	+,-	PTPRZ1,AASS	-22775,247796
chr4:164466781-164467423	chr4	+	164466781	164466909	True	NM_017923,NM_018352	chr4,chr4	-,+	MARCH1,C4orf43	67917,-51159
chr2:238472723-238473500	chr2	+	238472856	238473426	True	NM_015893,NM_022449	chr2,chr2	+,-	PRLH,RAB17	1790,26393
chr1:41710206-41711764	chr1	+	41710429	41711681	True	NM_012236,NM_001172218,NM_001172219,NR_037868,NM_001172220	chr1,chr1,chr1,chr1,chr1	-,-,-,+,-	SCMH1,SCMH1,SCMH1,LOC100507178,SCMH1	-2614,-2614,-2614,-230218,-2614
chr14:24457941-24458233	chr14	+	24458007	24458239	True	NR_023922,NM_198083	chr14,chr14	-,+	C14orf167,DHRS4L2	-33709,-31
chr5:52408591-52409858	chr5	+	52408773	52409896	True	NM_176806,NM_004531,NR_034107	chr5,chr5,chr5	-,-,+	MOCS2,MOCS2,LOC257396	-3175,-3448,-3138
chr10:35472856-35474325	chr10	+	35473319	35474374	True	NM_182769,NM_182770,NM_001198777,NM_182718,NM_182719,NM_182717,NM_182720	chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,-,+,+,+,+	CREM,CREM,CUL2,CREM,CREM,CREM,CREM	-8846,-8846,-93749,9680,9680,9680,9680
chr11:57229631-57230086	chr11	+	57229638	57230082	True	NM_017611,NM_178570	chr11,chr11	-,+	SLC43A3,RTN4RL2	-34585,-1350
chr17:33382230-33382970	chr17	+	33382230	33382928	True	NM_017559,NM_001017368	chr17,chr17	+,-	FNDC8,RFFL	65702,7882
chr7:117881182-117881684	chr7	+	117881322	117881555	True	NM_033427,NM_019644	chr7,chr7	-,+	CTTNBP2,ANKRD7	-367761,-16668
chr20:62326880-62327115	chr20	+	62326958	62327148	True	NM_001134758,NM_003823	chr20,chr20	-,+	ARFRP1,TNFRSF6B	12257,855
chr1:28833909-28834196	chr1	+	28833953	28834107	True	NR_002909,NR_030725,NR_030726,NR_036473,NM_001048199,NR_003077	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-	SNHG3,RCC1,RCC1,SNHG3,RCC1,SNORD99	-1549,-1549,-1549,-1549,-1549,71277
chr19:30865046-30865510	chr19	+	30865115	30865539	True	NM_014717,NM_031448	chr19,chr19	+,-	ZNF536,C19orf12	-1845,-658663
chr10:13390739-13391208	chr10	+	13390789	13391221	True	NM_001195604,NM_012247,NM_001195602,NM_182751	chr10,chr10,chr10,chr10	-,-,-,+	SEPHS1,SEPHS1,SEPHS1,MCM10	-491,-491,-491,-187286
chr15:78797745-78799660	chr15	+	78798156	78799706	True	NM_001083612,NM_001166694,NM_001013619	chr15,chr15,chr15	+,-,+	AGPHD1,CHRNA3,AGPHD1	199,113981,199
chr19:533300-533677	chr19	+	533324	533544	True	NM_182577,NM_004359	chr19,chr19	-,+	ODF3L2,CDC34	-58341,-1642
chr18:3446564-3448190	chr18	+	3446758	3448128	True	NM_019856,NM_173211,NM_173210,NM_173208,NM_170695,NM_003244,NM_173209,NM_173207	chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18	-,+,+,+,+,+,+,+	MYOM1,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1	-226652,5643,3462,1902,3462,2043,1844,46
chr19:2309634-2310318	chr19	+	2309645	2310319	True	NM_001101391,NM_001077238	chr19,chr19	-,+	LINGO3,SPPL2B	-1489,18309
chr20:29995671-29996109	chr20	+	29995871	29995991	True	NM_001011878,NR_002577,NM_001171832	chr20,chr20,chr20	-,+,-	DEFB121,DEFB122,DEFB121	-1802,13250,4700
chr19:8454020-8454801	chr19	+	8454114	8454779	True	NM_198471,NM_004218	chr19,chr19	-,+	KANK3,RAB11B	-45968,425
chr1:108768140-108768979	chr1	+	108768312	108769022	True	NM_001143987,NM_001143989	chr1,chr1	+,-	NBPF6,NBPF4	223881,17731
chr1:108768140-108768979	chr1	-	109010565	109011275	False	NM_001102592,NM_001143988	chr1,chr1	-,+	HENMT1,NBPF6	192519,-17712
chr5:72252361-72252688	chr5	+	72252404	72252727	True	NM_001146032,NM_138782,NM_152625	chr5,chr5,chr5	+,+,-	FCHO2,FCHO2,ZNF366	-647,-647,-449155
chr2:71207930-71209227	chr2	+	71208097	71209207	True	NM_144582,NM_024933,NM_001115116	chr2,chr2,chr2	-,+,+	TEX261,ANKRD53,ANKRD53	12844,-2573,-2573
chr19:43095553-43096677	chr19	+	43095556	43096416	True	NM_001816,NR_036584	chr19,chr19	-,+	CEACAM8,LOC100289650	2716,229598
chr10:134975031-134975400	chr10	+	134975030	134975448	True	NR_030170,NM_152643	chr10,chr10	-,+	MIR202,KNDC1	85726,-1110
chr7:2672056-2672481	chr7	+	2672060	2672492	True	NM_152743,NM_025250	chr7,chr7	-,+	BRAT1,TTYH3	-76668,-508
chr17:19285702-19287584	chr17	+	19285884	19287018	True	NM_001198695,NM_002749,NM_002404,NM_139033,NM_139032,NM_139034	chr17,chr17,chr17,chr17,chr17,chr17	-,+,-,+,+,+	MFAP4,MAPK7,MFAP4,MAPK7,MAPK7,MAPK7	3564,-4161,3564,-4901,-4901,-4161
chr5:169406748-169407942	chr5	+	169406952	169407978	True	NM_012188,NM_001129891	chr5,chr5	+,-	FOXI1,FAM196B	124938,16
chr7:99165010-99165604	chr7	+	99165166	99165416	True	NM_001009958,NM_145111,NM_001009960,NM_138494,NM_001085368,NM_001083956,NM_024061,NM_001085367,NM_001085366	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,-,+,+,+,+,+,+,+	ZNF655,FAM200A,ZNF655,ZNF655,ZNF655,ZNF655,ZNF655,ZNF655,ZNF655	-8783,-15409,-8783,-9186,-8783,-9186,-9186,-8783,-9186
chr17:19648063-19648364	chr17	+	19648268	19648406	True	NM_000382,NM_001135168,NM_001135167,NM_000691	chr17,chr17,chr17,chr17	+,-,-,-	ALDH3A2,ALDH3A1,ALDH3A1,ALDH3A1	-96255,416,569,3390
chrX:150067803-150068091	chrX	+	150067867	150068041	True	NM_031462,NM_001184808,NM_134446,NM_134445,NM_005342	chrX,chrX,chrX,chrX,chrX	-,-,-,-,+	CD99L2,CD99L2,CD99L2,CD99L2,HMGB3	-578,-578,-578,-578,83721
chr22:42079159-42080065	chr22	+	42079575	42079781	True	NM_005008,NM_001003796,NM_001142964	chr22,chr22,chr22	-,-,+	NHP2L1,NHP2L1,C22orf46	-1019,5182,6765
chr3:183755039-183755670	chr3	+	183755330	183755707	True	NM_182537,NM_001023587,NM_001145143,NM_001163646	chr3,chr3,chr3,chr3	+,-,+,+	HTR3D,ABCC5,HTR3D,HTR3D	-6057,-19603,-5859,-4770
chr6:125524003-125525784	chr6	+	125524381	125525563	True	NM_016063,NM_001003395	chr6,chr6	-,+	HDDC2,TPD52L1	97781,-49020
chr14:94982749-94984138	chr14	+	94982916	94983871	True	NM_173850,NM_006215	chr14,chr14	-,+	SERPINA12,SERPINA4	360,43911
chr14:56255853-56256756	chr14	+	56256160	56256785	True	NR_026796,NR_026797,NR_004844	chr14,chr14,chr14	-,-,+	C14orf34,C14orf34,RPL13AP3	6657,6657,-23249
chr4:646540-647316	chr4	+	646544	647286	True	NM_007100,NM_001145292	chr4,chr4	-,+	ATP5I,PDE6B	20891,87
chr3:183148139-183148351	chr3	+	183148166	183148336	True	NM_015078,NM_032047	chr3,chr3	-,+	MCF2L2,B3GNT5	-2311,-177185
chr14:54981004-54982103	chr14	+	54981003	54982154	True	NM_004124,NM_006568	chr14,chr14	-,+	GMFB,CGRRF1	-25259,-4481
chrY:14530762-14531214	chrY	+	14531069	14531240	True	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	243057,2200
chr5:142180-143246	chr5	+	142252	143155	True	NM_052909,NM_145265	chr5,chr5	+,-	PLEKHG4B,CCDC127	-1932,75192
chr19:50666482-50666794	chr19	+	50666519	50666639	True	NM_001145809,NM_152358	chr19,chr19	+,-	MYH14,IZUMO2	40245,15
chr5:137227531-137228680	chr5	+	137227764	137228492	True	NM_014386,NM_006805	chr5,chr5	+,-	PKD2L2,HNRNPA0	-2690,-137725
chr3:39322267-39322518	chr3	+	39322319	39322563	True	NM_001171171,NM_001171172,NM_005201,NM_001171174,NM_001337	chr3,chr3,chr3,chr3,chr3	-,-,+,-,-	CX3CR1,CX3CR1,CCR8,CX3CR1,CX3CR1	251,-389,48633,713,-792
chr4:6693661-6694160	chr4	+	6693903	6694205	True	NM_005980,NM_203462	chr4,chr4	+,-	S100P,MRFAP1L1	1360,17451
chr3:66308299-66310013	chr3	+	66308314	66309941	True	NR_028475,NM_015541	chr3,chr3	+,-	SLC25A26,LRIG1	-37197,240954
chr2:86795181-86795385	chr2	+	86795273	86795381	True	NM_016079,NM_001146688,NR_036454,NM_001193517,NM_001005753	chr2,chr2,chr2,chr2,chr2	-,+,-,-,-	VPS24,KDM3A,VPS24,VPS24,VPS24	-4653,-126747,-4653,-4653,-4653
chr12:78223019-78224550	chr12	+	78223018	78224588	True	NM_203394,NM_014903	chr12,chr12	-,+	E2F7,NAV3	-763658,480
chr17:76210717-76211352	chr17	+	76210880	76211261	True	NM_001168,NR_002219,NM_001012271,NM_001012270	chr17,chr17,chr17,chr17	+,-,+,+	BIRC5,EPR1,BIRC5,BIRC5	-654,9572,-654,-654
chr12:53537844-53538627	chr12	+	53538010	53538671	True	NM_001004304,NM_015989	chr12,chr12	+,-	ZNF740,CSAD	35863,35816
chr2:69175300-69176938	chr2	+	69175573	69176973	True	NM_182536,NM_019617	chr2,chr2	-,+	GKN2,GKN1	3179,24731
chr19:2428523-2429207	chr19	+	2428663	2429107	True	NM_182973,NM_012458	chr19,chr19	+,-	TMPRSS9,TIMM13	-38930,-788
chr2:62421525-62422254	chr2	+	62421737	62422277	True	NM_006430,NM_006577	chr2,chr2	-,+	CCT4,B3GNT2	-305946,984
chr17:13974920-13975696	chr17	+	13975255	13975542	True	NM_001007530,NM_001303	chr17,chr17	-,+	CDRT15,COX10	164661,-2592
chr17:20225598-20226147	chr17	+	20225702	20225950	True	NM_001042685,NR_023380	chr17,chr17	-,+	LGALS9B,CCDC144C	144948,-1275
chr11:9286800-9287016	chr11	+	9286847	9287065	True	NM_006391,NM_015213	chr11,chr11	+,-	IPO7,DENND5A	119103,4
chrX:138284859-138285185	chrX	+	138284975	138285143	True	NR_028597,NM_001139501,NM_001139500,NM_001139498	chrX,chrX,chrX,chrX	+,-,-,-	SRD5A1P1,FGF13,FGF13,FGF13	243834,2092,2092,2092
chr19:55671017-55671366	chr19	+	55671263	55671371	True	NM_178837,NM_000363,NM_017729	chr19,chr19,chr19	-,-,+	C19orf51,TNNI3,EPS8L1	6697,-2163,-79554
chr12:88399508-88399784	chr12	+	88399512	88399582	True	NM_152589,NM_001009894	chr12,chr12	-,+	C12orf50,C12orf29	23644,29685
chr4:73435296-73435592	chr4	+	73435425	73435641	True	NM_053036,NM_014243	chr4,chr4	+,-	NPFFR2,ADAMTS3	-530627,-909
chr10:102792256-102792470	chr10	+	102792302	102792510	True	NM_001195263,NM_024895,NM_030971	chr10,chr10,chr10	-,-,+	PDZD7,PDZD7,SFXN3	-1388,-1388,-1357
chr16:1478804-1479200	chr16	+	1478930	1479060	True	NM_001010878,NM_016111	chr16,chr16	-,+	C16orf91,TELO2	335,64291
chr12:54985729-54986086	chr12	+	54985761	54986109	True	NM_006741,NM_001165975	chr12,chr12	-,+	PPP1R1A,PDE1B	-3318,-30713
chr19:36912489-36912853	chr19	+	36912679	36912823	True	NM_133466,NR_033748	chr19,chr19	-,+	ZFP82,LOC644189	-3129,-291
chr7:560326-560535	chr7	+	560383	560505	True	NM_002607,NR_033963,NM_033023	chr7,chr7,chr7	-,+,-	PDGFA,FLJ44511,PDGFA	-902,-406,-902
chr14:24896677-24897126	chr14	+	24896697	24897055	True	NM_001039771,NM_015299	chr14,chr14	-,+	CBLN3,KHNYN	1726,2085
chr1:223192341-223193587	chr1	+	223192363	223193565	True	NM_032890,NM_003268	chr1,chr1	+,-	DISP1,TLR5	-203983,123109
chr19:17664478-17664839	chr19	+	17664477	17664619	True	NM_138454,NM_024656	chr19,chr19	-,+	NXNL1,GLT25D1	-92752,1891
chr2:211340554-211341043	chr2	+	211340598	211341088	True	NM_001136575,NM_001136574,NM_006055,NM_001122633	chr2,chr2,chr2,chr2	-,-,-,+	LANCL1,LANCL1,LANCL1,CPS1	461,391,453,1317
chr3:72895250-72895660	chr3	+	72895253	72895452	True	NM_001080393,NM_018130	chr3,chr3	+,-	GXYLT2,SHQ1	41932,2201
chr14:91978388-91978639	chr14	+	91978515	91978640	True	NM_032560,NR_003709	chr14,chr14	-,+	SMEK1,SNORA11B	-1871,-385796
chr7:5939252-5939789	chr7	+	5939408	5939636	True	NM_001099697,NM_015622	chr7,chr7	-,+	RSPH10B2,CCZ1	70728,-1123
chr7:5939252-5939789	chr7	-	6864806	6864857	False	NM_198097,NM_173565	chr7,chr7	-,+	C7orf28B,RSPH10B	1120,-71118
chr1:3662548-3663314	chr1	+	3662835	3663293	True	NR_033709,NR_033708,NR_033710,NR_033711,NR_033712,NM_152492	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,+	KIAA0495,KIAA0495,KIAA0495,KIAA0495,KIAA0495,CCDC27	694,694,694,694,92,5671
chr1:17044230-17044745	chr1	+	17044265	17044559	True	NR_026567,NR_037446	chr1,chr1	-,+	ESPNP,MIR3675	2143,-36566
chr7:56018414-56019244	chr7	+	56018545	56018735	True	NM_015969,NM_207366	chr7,chr7	+,-	MRPS17,SEPT14	875,-88063
chr12:52307365-52307638	chr12	+	52307468	52307552	True	NM_001077401,NM_000020,NM_001013690	chr12,chr12,chr12	+,+,-	ACVRL1,ACVRL1,FIGNL2	-1406,-6317,-81767
chr4:55526361-55527900	chr4	+	55526464	55527660	True	NM_002253,NM_000222,NM_001093772	chr4,chr4,chr4	-,+,+	KDR,KIT,KIT	464152,-2420,-2420
chr19:54386966-54387718	chr19	+	54387008	54387472	True	NM_144687,NM_002739	chr19,chr19	-,+	NLRP12,PRKCG	-59360,-1592
chr20:44601520-44601909	chr20	+	44601871	44601960	True	NM_004994,NM_022095	chr20,chr20	+,-	MMP9,ZNF335	35586,-1038
chr5:132087844-132088678	chr5	+	132087855	132088580	True	NM_007054,NM_001039780	chr5,chr5	-,+	KIF3A,CCNI2	-14590,-4770
chr6:54724151-54725863	chr6	+	54724374	54725794	True	NM_001010872,NM_001042406	chr6,chr6	+,-	FAM83B,HMGCLL1	-12856,718269
chr15:71151101-71151995	chr15	+	71151123	71151993	True	NM_018357,NM_001199017,NM_197958	chr15,chr15,chr15	-,+,-	LARP6,LRRC49,LARP6	-4625,32934,-4625
chr17:685394-685602	chr17	+	685414	685610	True	NM_018146,NM_016080	chr17,chr17	+,-	RNMTL1,GLOD4	12,11
chr13:28677703-28679548	chr13	+	28677904	28679291	True	NM_004119,NM_175854	chr13,chr13	-,+	FLT3,PAN3	-3175,33351
chr1:197117347-197118838	chr1	+	197117699	197118867	True	NM_018136,NM_001193640	chr1,chr1	-,+	ASPM,CRB1	-1875,118466
chr19:7830866-7831950	chr19	+	7831058	7831972	True	NR_026709,NM_001144910,NR_026707,NM_001144911,NR_026692,NM_014257,NM_001144905,NM_001144904,NM_001144907,NM_001144906,NM_001144909,NM_001144908,NR_026708	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,-,+,+,+,+,+,+,+,+	CLEC4M,CLEC4M,CLEC4M,CLEC4M,CD209,CLEC4M,CLEC4M,CLEC4M,CLEC4M,CLEC4M,CLEC4M,CLEC4M,CLEC4M	-3075,-3075,-3075,-3075,-18594,-3075,-3075,-3075,-3075,-3075,-3075,-3075,-3075
chr22:43117773-43118692	chr22	+	43117813	43118667	True	NR_029422,NM_017436	chr22,chr22	+,-	RNU12,A4GALT	-106613,-937
chrY:9644037-9645453	chrY	+	9644301	9645401	True	NR_001539,NR_003589	chrY,chrY	+,-	TTTY22,TTTY1B	-5591,-32373
chr10:76968049-76968626	chr10	+	76968048	76968466	True	NM_001184783,NM_001184823,NM_144589,NM_003375,NR_033675	chr10,chr10,chr10,chr10,chr10	+,+,-,+,+	VDAC2,VDAC2,COMTD1,VDAC2,VDAC2	1833,1445,27366,1833,1833
chr18:9488237-9489399	chr18	+	9488399	9489197	True	NM_001042388,NM_006788	chr18,chr18	-,+	PPP4R1,RALBP1	125464,-12927
chr15:45694284-45694542	chr15	+	45694314	45694574	True	NM_001482,NM_024063,NR_027635	chr15,chr15,chr15	-,+,+	GATM,SPATA5L1,SPATA5L1	-23334,-56,-56
chr2:20252195-20252401	chr2	+	20252263	20252401	True	NM_014713,NR_033875	chr2,chr2	-,+	LAPTM4A,FLJ12334	-474,-183704
chr1:149399172-149399875	chr1	+	149399208	149399893	True	NR_027484,NM_001024599	chr1,chr1	+,-	FCGR1C,HIST2H2BF	-29966,21
chr1:149399172-149399875	chr1	-	120905533	120906013	False	NR_027337,NM_001004340	chr1,chr1	+,-	HIST2H2BA,FCGR1B	20,29982
chr1:149399172-149399875	chr1	+	149783907	149784587	False	NM_001024599,NM_001161334,NM_001123375,NM_001034077	chr1,chr1,chr1,chr1	-,-,-,+	HIST2H2BF,HIST2H2BF,HIST2H3D,HIST2H4B	21,21,699,19633
chr22:51035748-51037559	chr22	+	51035865	51037295	True	NM_016431,NM_012324,NM_005198	chr22,chr22,chr22	+,+,-	MAPK8IP2,MAPK8IP2,CHKB	4266,1835,-14437
chr17:45610080-45611548	chr17	+	45610175	45611441	True	NR_033934,NM_006310	chr17,chr17	-,+	MRPL45P2,NPEPPS	-40189,-1782
chr17:45610080-45611548	chr17	-	36410672	36411641	False	NR_036750,NM_032351	chr17,chr17	-,+	LOC440434,MRPL45	1665,41356
chr14:95028527-95029052	chr14	+	95028579	95029080	True	NM_006215,NM_173850	chr14,chr14	+,-	SERPINA4,SERPINA12	-847,-44398
chr3:46040840-46041167	chr3	+	46040884	46041184	True	NM_024513,NM_006564	chr3,chr3	-,+	FYCO1,CXCR6	-3577,-55968
chr12:21810545-21810757	chr12	+	21810547	21810779	True	NM_030572,NM_002300,NM_001174097	chr12,chr12,chr12	+,-,-	C12orf39,LDHB,LDHB	-131342,60,-1
chr17:40611390-40611698	chr17	+	40611483	40611728	True	NM_001130021,NM_001130020,NM_005177,NM_012232	chr17,chr17,chr17,chr17	+,+,+,-	ATP6V0A1,ATP6V0A1,ATP6V0A1,PTRF	-680,-680,-680,-36145
chr19:44646337-44647482	chr19	+	44646405	44647392	True	NM_001144824,NM_006630,NR_033341	chr19,chr19,chr19	+,+,-	ZNF234,ZNF234,LOC100379224	-746,-746,-29069
chr15:90797036-90798467	chr15	+	90797049	90798450	True	NM_001029964,NM_006384	chr15,chr15	+,-	TTLL13,CIB1	-4347,-19770
chr1:202162336-202162869	chr1	+	202162352	202162870	True	NR_037664,NM_001017403	chr1,chr1	-,+	PTPN7,LGR6	-31636,247
chr11:111128698-111130131	chr11	+	111128944	111130020	True	NM_198498,NR_034154	chr11,chr11	+,-	C11orf53,C11orf92	-2288,40580
chr1:166964635-166964947	chr1	+	166964760	166964989	True	NM_199351,NM_032858	chr1,chr1	-,+	ILDR2,MAEL	-20199,-6300
chr19:42895314-42895936	chr19	+	42895528	42895704	True	NM_032488,NM_001410	chr19,chr19	-,+	CNFN,MEGF8	-1084,-65818
chr15:57590028-57590843	chr15	+	57590084	57590881	True	NR_015419,NR_024433	chr15,chr15	-,+	LOC145783,LOC283663	-379387,1681
chr1:13715670-13717588	chr1	+	13715805	13717283	True	NM_001099850,NM_001099851	chr1,chr1	-,+	PRAMEF18,PRAMEF17	-17400,-180
chr1:13715670-13717588	chr1	+	13494971	13496449	False	NM_001045480,NM_001099850	chr1,chr1	+,-	PRAMEF16,PRAMEF18	-180,-17402
chr17:54991976-54993847	chr17	+	54991979	54993615	True	NM_021626,NM_005082	chr17,chr17	+,-	SCPEP1,TRIM25	61852,-570
chr12:6977281-6978067	chr12	+	6977340	6977770	True	NM_032641,NM_000365,NM_001146316,NR_027483,NM_001159287	chr12,chr12,chr12,chr12,chr12	-,+,-,+,+	SPSB2,TPI1,SPSB2,TPI1,TPI1	4801,-698,4729,-113,-807
chr20:17551248-17552061	chr20	+	17551362	17551973	True	NM_001011546,NM_001161705,NM_006870	chr20,chr20,chr20	+,-,+	DSTN,BFSP1,DSTN	-814,-11757,-814
chr3:124771979-124773086	chr3	+	124772089	124773121	True	NM_020733,NR_033437	chr3,chr3	-,+	HEG1,UMPS	1731,-322927
chr19:50434200-50435753	chr19	+	50434556	50435639	True	NM_001193357,NM_016553,NM_012068,NM_012346,NM_001193646,NM_153718,NM_153719,NM_172374	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,+,-,+,-,-,-	NUP62,NUP62,ATF5,NUP62,ATF5,NUP62,NUP62,IL4I1	-1757,-1568,-2655,-1783,-2214,-1768,-1768,-1794
chr7:135347430-135347723	chr7	+	135347536	135347686	True	NM_001130929,NM_012450	chr7,chr7	+,-	PL-5283,SLC13A4	-366,65297
chr17:77018985-77019486	chr17	+	77018999	77019464	True	NM_198594,NM_030968,NM_138793	chr17,chr17,chr17	+,+,-	C1QTNF1,C1QTNF1,CANT1	786,786,-13100
chr2:232393122-232394025	chr2	+	232393303	232393848	True	NM_006056,NM_152614	chr2,chr2	-,+	NMUR1,C2orf57	1385,63726
chrX:24149106-24150048	chrX	+	24149134	24149945	True	NM_030624,NM_001178086	chrX,chrX	-,+	KLHL15,ZFX	-103831,17816
chr11:130031319-130031935	chr11	+	130031488	130031810	True	NM_014155,NM_021978	chr11,chr11	-,+	ZBTB44,ST14	152847,-1857
chr2:58318821-58319970	chr2	+	58318965	58319766	True	NM_001114636,NM_001130481	chr2,chr2	-,+	FANCL,VRK2	148802,-45170
chr4:140375260-140377110	chr4	+	140375446	140377034	True	NM_031296,NM_030648	chr4,chr4	+,-	RAB33B,SETD7	-536,100593
chr16:70570555-70571326	chr16	+	70571002	70571327	True	NR_003696,NM_015386,NR_003079,NR_037420	chr16,chr16,chr16,chr16	+,-,+,+	SNORD111B,COG4,SNORD111,MIR3647	-7648,-13545,580,-7651
chr12:113656243-113657213	chr12	+	113657157	113657233	True	NM_138451,NM_017901,NM_001143819	chr12,chr12,chr12	-,+,+	IQCD,TPCN1,TPCN1	1697,2026,2026
chr5:135371032-135372973	chr5	+	135371449	135373010	True	NM_000358,NR_030583	chr5,chr5	+,-	TGFBI,VTRNA2-1	-6917,43327
chr15:75014823-75015033	chr15	+	75014824	75015024	True	NM_000499,NM_000761	chr15,chr15	-,+	CYP1A1,CYP1A2	2903,26159
chr12:76670444-76671418	chr12	+	76670531	76671415	True	NM_015336,NM_024685	chr12,chr12	+,-	ZDHHC17,BBS10	486438,70857
chr22:35698648-35699649	chr22	+	35698853	35699451	True	NM_001135729,NM_005368,NM_001135732,NM_001135730,NM_005488,NR_024194,NR_024195	chr22,chr22,chr22,chr22,chr22,chr22,chr22	+,-,+,+,+,+,+	TOM1,MB,TOM1,TOM1,TOM1,TOM1,TOM1	-3636,313983,-3107,-3107,-3107,-3107,-3107
chr14:57273704-57274431	chr14	+	57273703	57274480	True	NM_021728,NM_172337,NR_029385	chr14,chr14,chr14	-,-,+	OTX2,OTX2,OTX2OS1	2754,-1358,5420
chr5:129238647-129239679	chr5	+	129238724	129239625	True	NR_024611,NM_175856	chr5,chr5	-,+	HINT1,CHSY3	1261451,897
chr8:67687765-67688313	chr8	+	67687793	67688339	True	NR_002734,NM_013257,NM_170709	chr8,chr8,chr8	-,+,+	PTTG3P,SGK3,SGK3	-7553,-428,-428
chr6:90055651-90056263	chr6	+	90055981	90056209	True	NM_014942,NM_016021	chr6,chr6	+,-	ANKRD6,UBE2J1	86687,6460
chr8:145558000-145558233	chr8	+	145558172	145558232	True	NM_024531,NM_012079,NM_031309	chr8,chr8,chr8	+,-,-	GPR172A,DGAT1,SCRT1	23992,-7605,1761
chr1:168148583-168148807	chr1	+	168148601	168148833	True	NM_153832,NM_001031800,NM_152902	chr1,chr1,chr1	-,+,+	GPR161,TIPRL,TIPRL	-42977,-481,-481
chr3:151467562-151469061	chr3	+	151467896	151468903	True	NM_207365,NM_178822	chr3,chr3	+,-	AADACL2,IGSF10	-16256,-291399
chr21:44808444-44809495	chr21	+	44808535	44809273	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	60630,37779
chr19:16222872-16223519	chr19	+	16223046	16223538	True	NM_005370,NM_054113	chr19,chr19	+,-	RAB8A,CIB3	-607,60798
chr18:14361639-14362317	chr18	+	14361744	14361810	True	NR_024076,NR_026756	chr18,chr18	-,+	CXADRP3,LOC284233	136945,-24373
chr17:15636538-15637300	chr17	+	15636684	15637220	True	NM_006470,NM_178571	chr17,chr17	-,+	TRIM16,TBC1D26	-50491,-1144
chr17:15636538-15637300	chr17	-	18546080	18546616	False	NM_001037330,NM_001039397	chr17,chr17	+,-	TRIM16L,TBC1D28	78785,1174
chr1:228872442-228872830	chr1	+	228872446	228872820	True	NM_033445,NM_021205	chr1,chr1	-,+	HIST3H2A,RHOU	-226886,-1681
chrX:114826381-114826708	chrX	+	114826409	114826713	True	NM_001136025,NM_020871,NM_001172335	chrX,chrX,chrX	+,-,+	PLS3,LRCH2,PLS3	1105,-357774,1105
chr21:40681022-40681470	chr21	+	40681389	40681474	True	NM_004627,NM_001007246,NM_018963,NR_033800,NM_033656	chr21,chr21,chr21,chr21,chr21	+,-,-,-,-	WRB,BRWD1,BRWD1,NCRNA00257,BRWD1	70738,4133,4133,5465,4133
chr7:73039940-73040464	chr7	+	73040172	73040312	True	NM_032951,NM_032952,NM_032953,NM_032954,NM_001077621	chr7,chr7,chr7,chr7,chr7	-,-,-,-,+	MLXIPL,MLXIPL,MLXIPL,MLXIPL,VPS37D	-1302,-1302,-1302,-1302,41861
chr15:92936362-92936805	chr15	+	92936456	92936764	True	NM_006011,NR_021493	chr15,chr15	+,-	ST8SIA2,LOC100144604	375,178779
chr13:29292073-29292719	chr13	+	29292165	29292537	True	NM_181785,NM_001135919,NM_015932	chr13,chr13,chr13	-,-,+	SLC46A3,SLC46A3,POMP	669,669,-59083
chrY:2369487-2369870	chrY	+	2369560	2369754	True	NM_001171135,NM_001171136,NM_004729,NM_145177,NR_033381	chrY,chrY,chrY,chrY,chrY	-,-,-,-,+	ZBED1,ZBED1,ZBED1,DHRSX,CD99P1	-980,-552,-552,-545,107551
chrY:2369487-2369870	chrX	+	2419560	2419754	False	NM_001171135,NM_001171136,NM_004729,NM_145177,NR_033381	chrX,chrX,chrX,chrX,chrX	-,-,-,-,+	ZBED1,ZBED1,ZBED1,DHRSX,CD99P1	-980,-552,-552,-545,107551
chrX:53460042-53460614	chrX	+	53460412	53460550	True	NM_001037811,NM_001031745,NM_004493	chrX,chrX,chrX	-,+,-	HSD17B10,RIBC1,HSD17B10	823,-10574,823
chr10:88717152-88717433	chr10	+	88717325	88717389	True	NM_003087,NM_024756	chr10,chr10	+,-	SNCG,MMRN2	898,88
chr2:61372851-61374194	chr2	+	61373002	61373582	True	NR_036496,NM_001143960	chr2,chr2	-,+	LOC339803,C2orf74	-892,-822
chr5:441717-442219	chr5	+	441923	442029	True	NM_007277,NM_138464	chr5,chr5	+,-	EXOC3,C5orf55	1304,1291
chr1:1655742-1655956	chr1	+	1655746	1655922	True	NM_024011,NM_033489,NM_033488,NR_002946,NM_033487,NM_033486,NM_033492,NM_033493,NM_033529	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,-,-,-,-	CDK11A,CDK11B,CDK11B,MMP23A,CDK11B,CDK11B,CDK11B,CDK11B,CDK11A	15,-1,-1,-24419,-1,-1,-1,-1,15
chr1:226073687-226074623	chr1	+	226074077	226074591	True	NM_020997,NM_000120,NM_014698	chr1,chr1,chr1	-,+,-	LEFTY1,EPHX1,TMEM63A	2305,-61126,-3657
chr11:71850186-71850644	chr11	+	71850185	71850563	True	NM_014042,NM_000804	chr11,chr11	-,+	C11orf51,FOLR3	-26363,-3465
chr17:6541412-6541723	chr17	+	6541594	6541748	True	NM_014804,NM_032731	chr17,chr17	-,+	KIAA0753,TXNDC17	2549,2473
chr1:117756250-117758199	chr1	+	117756271	117758018	True	NM_024626,NR_030640	chr1,chr1	-,+	VTCN1,MIR942	-2722,-119057
chrY:1664132-1664461	chrY	+	1664275	1664435	True	NM_004043,NR_027383,NM_005088,NM_178129	chrY,chrY,chrY,chrY	+,+,+,-	ASMT,AKAP17A,AKAP17A,P2RY8	14,-3841,-3841,-58238
chrY:1664132-1664461	chrX	+	1714275	1714435	False	NM_004043,NR_027383,NM_005088,NM_178129	chrX,chrX,chrX,chrX	+,+,+,-	ASMT,AKAP17A,AKAP17A,P2RY8	14,-3841,-3841,-58238
chr6:26372200-26373199	chr6	+	26372201	26373239	True	NM_003543,NM_007047,NM_001197248,NM_001197249,NM_001197246,NM_001197247	chr6,chr6,chr6,chr6,chr6,chr6	-,+,+,+,+,+	HIST1H4H,BTN3A2,BTN3A2,BTN3A2,BTN3A2,BTN3A2	-86474,-6860,-6788,-6860,-3852,-6860
chr21:43188530-43188732	chr21	+	43188530	43188677	True	NR_024028,NM_020639	chr21,chr21	+,-	NCRNA00112,RIPK4	-51987,-1281
chr19:14201341-14201544	chr19	+	14201346	14201534	True	NR_024282,NM_138352	chr19,chr19	+,-	LOC113230,SAMD1	-17576,-114
chr10:124214920-124216816	chr10	+	124214930	124216754	True	NM_001099667,NM_001010912,NM_002775	chr10,chr10,chr10	+,-,+	ARMS2,C10orf120,HTRA1	-809,242635,4286
chr19:10740247-10740724	chr19	+	10740293	10740767	True	NM_020428,NR_024333	chr19,chr19	+,-	SLC44A2,LOC147727	-4173,23831
chr17:1943129-1944580	chr17	+	1943506	1944616	True	NR_029674,NR_029625,NM_080822	chr17,chr17,chr17	-,-,+	MIR132,MIR212,OVCA2	8736,9108,660
chr10:43761686-43761932	chr10	+	43761700	43761908	True	NM_001184963,NM_145313	chr10,chr10	+,-	FXYD4,RASGEF1A	105183,509
chr6:38692798-38693388	chr6	+	38693138	38693408	True	NM_006708,NM_001371	chr6,chr6	-,+	GLO1,DNAH8	-22186,-2645
chr16:1348908-1349244	chr16	+	1348978	1349208	True	NM_194261,NM_001001410	chr16,chr16	+,-	UBE2I,C16orf42	9971,52715
chr13:99998760-99999080	chr13	+	99998763	99999130	True	NM_004951,NR_030353,NR_024013	chr13,chr13,chr13	-,+,+	GPR183,MIR623,FKSG29	-39014,9254,4543
chrX:105067066-105068292	chrX	+	105067173	105068325	True	NM_198465,NM_000354	chrX,chrX	+,-	NRK,SERPINA7	-688,214443
chr1:65888915-65890601	chr1	+	65888993	65890620	True	NM_001198683,NM_001198681,NM_017526,NR_029516,NM_001003680,NM_001003679,NM_002303	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,-,+,+,+	LEPROT,LEPROT,LEPROT,MIR101-1,LEPR,LEPR,LEPR	-2920,-2652,-2920,-364802,-2716,-2716,-2716
chr3:71802279-71802598	chr3	+	71802329	71802503	True	NM_173359,NM_018971,NM_001134649	chr3,chr3,chr3	-,+,-	EIF4E3,GPR27,EIF4E3	1471,697,1079
chr7:47578689-47579464	chr7	+	47578730	47579380	True	NM_001123065,NM_022748	chr7,chr7	+,-	C7orf65,TNS3	115461,42414
chr2:183771903-183773347	chr2	+	183771914	183772418	True	NM_001142314,NM_001463	chr2,chr2	+,-	DUSP19,FRZB	170868,-40416
chr4:3315105-3315403	chr4	+	3315110	3315422	True	NM_002926,NM_198229,NM_002337	chr4,chr4,chr4	+,+,-	RGS12,RGS12,LRPAP1	451,451,218852
chr5:76933645-76934296	chr5	+	76933660	76933908	True	NM_032109,NM_003719	chr5,chr5	-,+	OTP,PDE8B	664,-427005
chr1:3544305-3545691	chr1	+	3544439	3545633	True	NM_001409,NM_182752	chr1,chr1	-,+	MEGF6,TPRG1L	-16380,-2934
chr16:72124872-72125299	chr16	+	72124872	72125326	True	NM_001142317,NM_017853,NM_014003,NM_001142318	chr16,chr16,chr16,chr16	-,-,+,-	TXNL4B,TXNL4B,DHX38,TXNL4B	2492,2263,2288,2939
chr7:6630262-6631055	chr7	+	6630377	6630886	True	NM_024067,NM_001145118	chr7,chr7	+,-	C7orf26,GRID2IP	-513,-39310
chr19:45996846-45997241	chr19	+	45996871	45996997	True	NM_005619,NM_001080401,NM_206900,NM_206901	chr19,chr19,chr19,chr19	-,+,-,-	RTN2,PPM1N,RTN2,RTN2	3364,4733,3366,-397
chr1:91967023-91967332	chr1	+	91967044	91967290	True	NM_003503,NM_001134420,NM_001017975,NM_001134419	chr1,chr1,chr1,chr1	+,+,-,+	CDC7,CDC7,HFM1,CDC7	-691,-430,-96618,-691
chr2:201754828-201756704	chr2	+	201755097	201756746	True	NM_001142356,NM_032472,NM_001142355,NM_001136039,NM_130906,NM_021824	chr2,chr2,chr2,chr2,chr2,chr2	+,-,+,+,-,+	NIF3L1,PPIL3,NIF3L1,NIF3L1,PPIL3,NIF3L1	24,-1248,-1102,-1102,-1248,-1044
chr7:140104220-140105179	chr7	+	140104315	140104915	True	NM_001008749,NM_032295,NM_207113	chr7,chr7,chr7	+,-,-	RAB19,SLC37A3,SLC37A3	-523,-6004,-6004
chr16:2803842-2804339	chr16	+	2803968	2804296	True	NM_016333,NR_027274,NR_027275	chr16,chr16,chr16	+,-,-	SRRM2,LOC100128788,LOC100128788	-1692,-9170,-1367
chr7:43656350-43656739	chr7	+	43656548	43656713	True	NM_018224,NM_004760	chr7,chr7	-,+	C7orf44,STK17A	112421,-33914
chr9:140170035-140171051	chr9	+	140170170	140170972	True	NM_017723,NM_001004354	chr9,chr9	+,-	C9orf167,NRARP	1307,25781
chr2:203140915-203141581	chr2	+	203141113	203141287	True	NR_003058,NM_003352	chr2,chr2	+,-	SNORD70,SUMO1	-17,-37791
chr5:172072069-172072412	chr5	+	172072087	172072329	True	NM_001142651,NM_004417	chr5,chr5	+,-	NEURL1B,DUSP1	-3862,125924
chr11:11875536-11876360	chr11	+	11875695	11876368	True	NM_017944,NM_001018057	chr11,chr11	+,-	USP47,DKK3	-12782,153875
chr9:67293675-67295407	chr9	+	67293755	67294806	True	NM_032250,NR_002817	chr9,chr9	+,-	ANKRD20A1,AQP7P1	631954,-4263
chr9:67293675-67295407	chr9	-	42852590	42853641	False	NR_026759,NR_026558	chr9,chr9	-,+	FAM95B1,AQP7P3	179721,4510
chr9:67293675-67295407	chr9	+	69655707	69656758	False	NM_001085457,NR_024443	chr9,chr9	-,+	CBWD6,LOC100133920	-393114,-4397
chr9:67293675-67295407	chr9	-	67025577	67026628	False	NR_024443,NR_024496	chr9,chr9	-,+	LOC100133920,LOC442421	4404,-531366
chr5:180650325-180650642	chr5	+	180650330	180650659	True	NR_002592,NM_033549,NM_033342,NM_201627	chr5,chr5,chr5,chr5	-,+,-,+	SNORD96A,TRIM41,TRIM7,TRIM41	18280,-75,-18153,-75
chr3:71630033-71630548	chr3	+	71630068	71630574	True	NM_018971,NM_001012505,NM_032682	chr3,chr3,chr3	+,-,-	GPR27,FOXP1,FOXP1	172626,2616,2616
chr20:30027888-30028221	chr20	+	30027900	30028236	True	NM_153324,NM_001171832	chr20,chr20	+,-	DEFB123,DEFB121	174,-27259
chr1:43765963-43766298	chr1	+	43765965	43766249	True	NM_005424,NM_001164829	chr1,chr1	+,-	TIE1,C1orf210	414,-14677
chr22:29198497-29198776	chr22	+	29198513	29198636	True	NM_005080,NM_173510,NM_001079539	chr22,chr22,chr22	-,+,-	XBP1,CCDC117,XBP1	-1953,-29902,-1953
chr1:152191540-152191930	chr1	+	152191544	152191968	True	NM_001009931,NM_178438	chr1,chr1	-,+	HRNR,LCE5A	4751,291351
chr22:34317531-34317733	chr22	+	34317553	34317763	True	NM_133642,NM_000362,NM_004737	chr22,chr22,chr22	-,+,-	LARGE,TIMP3,LARGE	-1137,-1120802,-1137
chr16:2563153-2563429	chr16	+	2563162	2563472	True	NM_001145815,NM_001048212,NM_015944,NM_001694,NM_001198569	chr16,chr16,chr16,chr16,chr16	+,-,+,+,+	AMDHD2,CEMP1,AMDHD2,ATP6V0C,ATP6V0C	6890,17987,6890,398,254
chr3:122333393-122333731	chr3	+	122333452	122333523	True	NM_031458,NM_152615	chr3,chr3	-,+	PARP9,PARP15	-49929,1001
chr7:5866666-5867354	chr7	+	5867016	5867116	True	NM_207116,NR_023382	chr7,chr7	-,+	RNF216,ZNF815	-45655,-4291
chr10:12874364-12874784	chr10	+	12874372	12874720	True	NR_027322,NM_031455	chr10,chr10	+,-	LOC283070,CCDC3	412,169034
chr3:45932694-45933107	chr3	+	45932719	45933160	True	NM_020347,NM_006641,NM_031200,NR_036525	chr3,chr3,chr3,chr3	-,+,+,+	LZTFL1,CCR9,CCR9,CCR9	-49098,-4782,-4782,-4782
chr17:34086797-34088213	chr17	+	34086801	34087901	True	NM_145272,NM_139285	chr17,chr17	+,-	C17orf50,GAS2L2	14,-6904
chr2:99264075-99264885	chr2	+	99264074	99264612	True	NM_001160154,NM_014044	chr2,chr2	-,+	MGAT4A,UNC50	15390,-39083
chr3:169494767-169496073	chr3	+	169494767	169496104	True	NM_001185119,NM_001185118,NM_032487,NR_033703,NR_033702,NM_018657	chr3,chr3,chr3,chr3,chr3,chr3	+,+,-,+,+,+	MYNN,MYNN,ARPM1,MYNN,MYNN,MYNN	-2771,-3971,-7084,-3971,-3971,-3971
chr6:27440943-27441284	chr6	+	27440952	27441157	True	NM_001076781,NM_007149	chr6,chr6	+,-	ZNF391,ZNF184	-84479,-55
chr19:56164442-56164670	chr19	+	56164442	56164554	True	NM_203374,NM_007279,NM_001012478,NM_016535,NM_013301	chr19,chr19,chr19,chr19,chr19	-,+,+,+,+	ZNF784,U2AF2,U2AF2,ZNF581,CCDC106	-28501,861,861,-9507,-5539
chr1:229770111-229771049	chr1	+	229770300	229771097	True	NM_014409,NM_001025247,NM_014777	chr1,chr1,chr1	-,-,+	TAF5L,TAF5L,URB2	-8506,-8506,-8372
chr16:2075877-2076212	chr16	+	2075883	2076171	True	NM_001130012,NM_178167,NM_001099456,NM_004785	chr16,chr16,chr16,chr16	+,-,+,+	SLC9A3R2,ZNF598,NPW,SLC9A3R2	716,-16120,-6414,716
chr12:50135348-50135880	chr12	+	50135373	50135815	True	NM_001098576,NM_198900,NM_003217	chr12,chr12,chr12	+,-,+	TMBIM6,FMNL3,TMBIM6	108,-34176,-131
chr5:138843248-138844589	chr5	+	138843365	138844633	True	NM_003339,NM_001077693	chr5,chr5	+,-	UBE2D2,ECSCR	96117,-1045
chr6:43447250-43448302	chr6	+	43447325	43448235	True	NM_001146020,NM_206539,NM_080604,NR_027394,NM_001146019,NM_001146018,NM_001146017,NM_001146016	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	+,-,+,+,+,+,+,+	TJAP1,DLK2,TJAP1,TJAP1,TJAP1,TJAP1,TJAP1,TJAP1	-2115,-23539,-2115,-2115,-2115,-2115,9086,-2115
chr10:103879296-103879727	chr10	+	103879357	103879571	True	NM_001113407,NM_015062,NM_003893	chr10,chr10,chr10	-,+,-	LDB1,PPRC1,LDB1	689,13215,-4634
chr17:8110717-8111116	chr17	+	8110716	8111100	True	NM_004217,NR_037447	chr17,chr17	-,+	AURKB,MIR3676	2833,-20275
chr3:129720445-129720969	chr3	+	129720594	129720798	True	NM_001128224,NM_007117	chr3,chr3	-,+	TMCC1,TRH	-108175,-27531
chr7:156112582-156112796	chr7	+	156112669	156112747	True	NR_026865,NR_024119	chr7,chr7	-,+	C7orf13,NCRNA00244	320651,220437
chr12:54585449-54587420	chr12	+	54585513	54587381	True	NR_026656,NM_014311	chr12,chr12	+,-	LOC400043,SMUG1	-65709,-2756
chr17:16559548-16560108	chr17	+	16559547	16559786	True	NM_020787,NM_014695	chr17,chr17	-,+	ZNF624,CCDC144A	-2380,33852
chr6:150261909-150262373	chr6	+	150262077	150262371	True	NM_025217,NM_001001788	chr6,chr6	+,-	ULBP2,RAET1G	764,-17863
chr16:74734666-74735448	chr16	+	74734856	74735489	True	NM_152649,NM_032268,NM_001142497	chr16,chr16,chr16	-,+,-	MLKL,ZNRF1,MLKL	-67,297425,-67
chr10:100208207-100209984	chr10	+	100208766	100209514	True	NM_182639,NM_014472,NM_000195	chr10,chr10,chr10	-,+,-	HPS1,C10orf28,HPS1	-2062,-314444,-2062
chr18:75689672-75690011	chr18	+	75689862	75689996	True	NM_001480,NM_001025100	chr18,chr18	+,-	GALR1,MBP	-727905,-845088
chr1:1622910-1623172	chr1	+	1622910	1623214	True	NR_002946,NM_001110781	chr1,chr1	+,-	MMP23A,SLC35E2B	8163,1079
chr1:1622910-1623172	chr1	+	1676185	1676489	False	NM_182838,NM_001199787,NR_002946	chr1,chr1,chr1	-,-,+	SLC35E2,SLC35E2,MMP23A	999,999,-44858
chr16:29276367-29276591	chr16	+	29276371	29276571	True	NR_002939,NM_001031827	chr16,chr16	+,-	RUNDC2C,BOLA2	25969,189764
chr16:29276367-29276591	chr16	+	88272242	88272332	False	NM_001127464,NM_001739	chr16,chr16	+,-	ZNF469,CA5A	221546,-302130
chr16:83984816-83985983	chr16	+	83984938	83985781	True	NM_013370,NM_001080442,NM_182981,NM_182980	chr16,chr16,chr16,chr16	+,-,+,+	OSGIN1,SLC38A8,OSGIN1,OSGIN1	-2317,90031,1045,-2317
chr7:3081363-3082166	chr7	+	3081832	3082212	True	NM_032415,NM_152744	chr7,chr7	-,+	CARD11,SDK1	1347,258867
chr17:46655574-46655834	chr17	+	46655586	46655801	True	NM_024015,NR_029608,NM_002146,NR_033201	chr17,chr17,chr17,chr17	-,-,-,+	HOXB4,MIR10A,HOXB3,LOC404266	4,1558,-3776,12021
chr19:12865629-12866491	chr19	+	12865703	12866509	True	NM_001100176,NM_024038,NM_017682	chr19,chr19,chr19	-,-,+	HOOK2,C19orf43,BEST2	19975,-20174,-2347
chr7:28448101-28448494	chr7	+	28448187	28448499	True	NM_182898,NM_175061	chr7,chr7	+,-	CREB5,JAZF1	3644,-227750
chr14:102553948-102554173	chr14	+	102554087	102554215	True	NM_181302,NM_005348	chr14,chr14	+,-	WDR20,HSP90AA1	51996,-575
chr18:74532762-74533817	chr18	+	74532773	74533719	True	NM_007345,NM_001025081	chr18,chr18	+,-	ZNF236,MBP	2396,195386
chr19:58141992-58143189	chr19	+	58142025	58142766	True	NM_198855,NM_017879,NM_006385	chr19,chr19,chr19	+,-,+	ZNF211,ZNF416,ZNF211	1768,-51782,1768
chr10:30970468-30971515	chr10	+	30970504	30971564	True	NM_183058,NM_005204	chr10,chr10	-,+	LYZL2,MAP3K8	-51857,-247696
chr12:54759294-54760117	chr12	+	54759434	54759870	True	NR_029894,NM_020370	chr12,chr12	+,-	MIR148B,GPR84	-28493,-1164
chr9:139138070-139138428	chr9	+	139138109	139138251	True	NM_015597,NM_181701	chr9,chr9	+,-	GPSM1,QSOX2	83680,-422
chr3:187865362-187867272	chr3	+	187865484	187867046	True	NR_036497,NM_001167672	chr3,chr3	-,+	LOC339929,LPP	4885,4616
chr2:224574090-224575806	chr2	+	224574126	224575628	True	NM_022915,NM_003469	chr2,chr2	+,-	MRPL44,SCG2	246492,-106909
chr11:15720761-15721680	chr11	+	15720772	15721660	True	NM_001145819,NM_001042536	chr11,chr11	-,+	SOX6,INSC	702803,-584339
chr7:143057266-143057657	chr7	+	143057382	143057650	True	NM_001010972,NM_001031690,NM_014690	chr7,chr7,chr7	+,-,-	ZYX,FAM131B,FAM131B	20709,2240,1573
chrX:102465761-102467046	chrX	+	102465766	102466592	True	NM_001080425,NM_001127688,NM_001006684	chrX,chrX,chrX	+,+,-	BEX4,BEX4,TCEAL8	3427,3427,43579
chr11:112251416-112252977	chr11	+	112251490	112252663	True	NM_000317,NM_001145024	chr11,chr11	+,-	PTS,C11orf34	-154453,-119907
chr5:112825130-112826192	chr5	+	112825197	112826198	True	NM_001085377,NM_022828	chr5,chr5	-,+	MCC,YTHDC2	-670,23192
chr4:57549243-57549723	chr4	+	57549389	57549745	True	NM_032495,NM_001145460,NM_139212,NM_206919	chr4,chr4,chr4,chr4	-,-,-,+	HOPX,HOPX,HOPX,ARL9	-1517,-1517,-1517,-178071
chrX:70798984-70799218	chrX	+	70799134	70799202	True	NM_052957,NM_001142797	chrX,chrX	+,-	ACRC,CXCR3	-1311,39215
chr8:6739429-6740603	chr8	+	6739541	6740647	True	NM_005218,NM_018361	chr8,chr8	-,+	DEFB1,AGPAT5	-4012,-173721
chr12:56387754-56389166	chr12	+	56387874	56389216	True	NM_006928,NM_000456,NM_001032386,NM_001032387	chr12,chr12,chr12,chr12	-,+,+,+	PMEL,SUOX,SUOX,SUOX	-27378,1826,1826,1826
chr6:44233468-44233871	chr6	+	44233535	44233900	True	NM_001137560,NM_004556,NM_178148	chr6,chr6,chr6	+,-,-	TMEM151B,NFKBIE,SLC35B2	4579,-10,-8252
chr16:18573803-18574308	chr16	+	18573959	18574313	True	NM_001004060,NM_173614,NR_003569	chr16,chr16,chr16	-,-,+	NOMO2,NOMO2,ABCC6P1	-525,-525,8256
chr16:18573803-18574308	chr16	-	14926748	14926922	False	NR_023387,NM_014287	chr16,chr16	-,+	ABCC6P2,NOMO1	-8189,720
chr16:18573803-18574308	chr16	-	16325583	16325937	False	NM_001171,NM_001079528,NM_001004067	chr16,chr16,chr16	-,-,+	ABCC6,ABCC6,NOMO3	-8255,-8255,451
chr17:18967756-18968765	chr17	+	18967943	18968773	True	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	62008,-17607
chr17:18967756-18968765	chr17	-	19090018	19090848	False	NM_006613,NM_001102664	chr17,chr17	-,+	GRAP,EPN2	-139682,49841
chr17:18967756-18968765	chr17	+	19094038	19094868	False	NM_006613,NM_001102664	chr17,chr17	-,+	GRAP,EPN2	-143702,45821
chr17:18967756-18968765	chr17	-	18963914	18964744	False	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	66037,-13578
chr17:18967756-18968765	chr17	+	19016429	19017259	False	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	13522,-66093
chr15:66856270-66857634	chr15	+	66856280	66857610	True	NM_207338,NR_003105	chr15,chr15	-,+	LCTL,ZWILCH	275,-58900
chr7:150383552-150384406	chr7	+	150383636	150384321	True	NM_015660,NR_024115	chr7,chr7	+,-	GIMAP2,GIMAP6	-893,-53956
chr17:21528529-21529147	chr17	+	21528837	21528974	True	NM_001113434,NM_001194958	chr17,chr17	-,+	C17orf51,KCNJ18	-73896,-220442
chr1:54872306-54872620	chr1	+	54872457	54872581	True	NM_018070,NM_145716,NM_147161,NM_001009955	chr1,chr1,chr1,chr1	-,-,+,-	SSBP3,SSBP3,ACOT11,SSBP3	-478,-478,141225,-365
chr5:111193809-111194063	chr5	+	111193835	111194101	True	NM_001142476,NR_015370	chr5,chr5	-,+	C5orf13,NCRNA00219	-99920,302121
chr2:102801844-102803553	chr2	+	102801941	102803336	True	NM_003854,NM_032718	chr2,chr2	+,-	IL1RL2,MFSD9	96,550058
chr16:1833379-1833785	chr16	+	1833405	1833707	True	NM_080861,NM_012225	chr16,chr16	-,+	SPSB3,NUBP2	-824,-523
chr1:156542216-156542438	chr1	+	156542236	156542444	True	NM_001105669,NM_178229	chr1,chr1	+,-	TTC24,IQGAP3	7074,2
chr10:100027478-100027738	chr10	+	100027580	100027738	True	NM_014472,NM_032211	chr10,chr10	+,-	C10orf28,LOXL4	-133250,319
chr5:170308711-170309377	chr5	+	170308795	170309082	True	NM_004137,NM_022897	chr5,chr5	-,+	KCNMB1,RANBP17	-492157,-19963
chr9:123943718-123944317	chr9	+	123943738	123944360	True	NM_001127662,NM_016322	chr9,chr9	+,-	GSN,RAB14	86019,20055
chr6:119209505-119210325	chr6	+	119209671	119210378	True	NM_017696,NM_014034	chr6,chr6	-,+	MCM9,ASF1A	42582,4862
chr9:74764919-74765777	chr9	+	74765127	74765743	True	NM_004293,NM_001128618	chr9,chr9	+,-	GDA,C9orf57	-890,-89606
chr3:50699777-50701226	chr3	+	50699865	50700922	True	NM_145071,NM_004947	chr3,chr3	-,+	CISH,DOCK3	-50603,11749
chr12:7282410-7282926	chr12	+	7282457	7282609	True	NM_014718,NM_031491	chr12,chr12	+,-	CLSTN3,RBP5	357,-991
chr1:40352038-40353952	chr1	+	40352141	40353858	True	NM_001136493,NM_017646	chr1,chr1	+,-	MFSD2A,TRIT1	66925,-2964
chr2:110969870-110970110	chr2	+	110969984	110970102	True	NM_207181,NM_001128178,NM_001128179,NR_037626,NM_000272	chr2,chr2,chr2,chr2,chr2	-,-,-,+,-	NPHP1,NPHP1,NPHP1,LOC100507334,NPHP1	-7345,-7345,-7345,33112,-7345
chr9:136240031-136240401	chr9	+	136240032	136240201	True	NM_153710,NM_033161	chr9,chr9	+,-	C9orf96,SURF4	3082,2826
chr12:51719338-51720753	chr12	+	51719589	51720784	True	NM_001136269,NM_016293	chr12,chr12	+,-	DAZAP2,BIN2	-87137,-1651
chr17:1549244-1550218	chr17	+	1549282	1549810	True	NM_001163673,NR_028075,NM_031430,NR_028076,NM_145352,NM_145350,NM_003693	chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,-,-,-,-	WDR81,SCARF1,RILP,SCARF1,SCARF1,SCARF1,SCARF1	70006,-241,3632,-241,-241,-241,-241
chr2:88927714-88928000	chr2	+	88927720	88928040	True	NM_144563,NM_004836	chr2,chr2	+,-	RPIA,EIF2AK3	63135,-626
chr6:73935305-73935883	chr6	+	73935343	73935886	True	NM_001126063,NM_001017361	chr6,chr6	-,+	KHDC1L,C6orf221	-168,136513
chr9:34971763-34972579	chr9	+	34971932	34972624	True	NM_007126,NM_015297	chr9,chr9	-,+	VCP,KIAA1045	100167,-13791
chr5:10577618-10578300	chr5	+	10577720	10578290	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-13336,183147
chr22:40744543-40744790	chr22	+	40744764	40744840	True	NM_001123378,NM_000026,NM_020831	chr22,chr22,chr22	+,+,-	ADSL,ADSL,MKL1	-2315,-2315,287902
chr10:14818736-14820577	chr10	+	14818816	14820592	True	NM_031453,NM_016299	chr10,chr10	-,+	FAM107B,HSPA14	-1920,59668
chr17:8197526-8198543	chr17	+	8197551	8198585	True	NM_016492,NM_001177802,NM_201520,NM_001177801	chr17,chr17,chr17,chr17	+,+,-,+	RANGRF,RANGRF,SLC25A35,RANGRF	-5635,-5635,55,-5635
chr12:12715131-12715634	chr12	+	12715264	12715629	True	NM_001310,NM_030640	chr12,chr12	+,-	CREBL2,DUSP16	49201,-72
chr22:27022290-27023904	chr22	+	27022473	27023952	True	NM_001886,NM_001887	chr22,chr22	+,-	CRYBA4,CRYBB1	-4602,-8482
chr12:121404918-121405481	chr12	+	121404953	121405497	True	NR_024345,NM_000545	chr12,chr12	-,+	NCRNA00262,HNF1A	4648,11051
chr1:46047968-46048433	chr1	+	46047973	46048249	True	NM_002482,NM_001195193,NM_001114938,NM_152298	chr1,chr1,chr1,chr1	+,+,-,+	NASP,NASP,CCDC17,NASP	1410,1410,41532,1410
chr3:134094007-134095500	chr3	+	134094092	134095194	True	NM_001042383,NM_016201	chr3,chr3	+,-	CEP63,AMOTL2	109380,-686
chr1:52869984-52870287	chr1	+	52870025	52870327	True	NM_032864,NM_004153,NM_001190818,NM_001190819	chr1,chr1,chr1,chr1	+,-,-,-	PRPF38A,ORC1,ORC1,ORC1	-29,-54,-54,-54
chrX:2881012-2881300	chrX	+	2881020	2881317	True	NM_000047,NM_001011719	chrX,chrX	-,+	ARSE,ARSH	1233,43336
chr2:97171396-97172927	chr2	+	97171502	97172519	True	NM_212481,NR_026875	chr2,chr2	+,-	ARID5A,NEURL3	29944,1378
chr7:65217258-65217807	chr7	+	65217302	65217594	True	NR_003110,NM_000181,NR_002961	chr7,chr7,chr7	+,-,+	CCT6P1,GUSB,SNORA22	-1269,229765,2918
chr4:88341409-88342789	chr4	+	88341492	88342670	True	NM_198038,NM_024047,NM_016245	chr4,chr4,chr4	+,+,-	NUDT9,NUDT9,HSD17B11	1064,1064,-29037
chrX:48661109-48661986	chrX	+	48661255	48662001	True	NM_006044,NM_013271	chrX,chrX	+,-	HDAC6,PCSK1N	-819,32009
chr19:1861178-1861420	chr19	+	1861198	1861342	True	NR_034114,NM_031918	chr19,chr19	+,-	LOC100288123,KLF16	-39161,2272
chr1:93654691-93655766	chr1	+	93655169	93655774	True	NM_016040,NM_206886,NM_001167830,NR_030761	chr1,chr1,chr1,chr1	-,+,-,-	TMED5,CCDC18,TMED5,TMED5	-8923,-8945,-8923,-8923
chr2:45235724-45236253	chr2	+	45235809	45236231	True	NM_005413,NM_016932	chr2,chr2	+,-	SIX3,SIX2	-66823,361
chr10:22514796-22516460	chr10	+	22514908	22516237	True	NM_001199938,NM_012071	chr10,chr10	-,+	EBLN1,COMMD3	-15996,89074
chr19:56187389-56189078	chr19	+	56187443	56188811	True	NM_001130072,NM_203374,NM_001130071,NM_013333	chr19,chr19,chr19,chr19	+,-,+,+	EPN1,ZNF784,EPN1,EPN1	-935,-51502,135,-935
chr12:122751564-122752243	chr12	+	122751700	122751948	True	NM_030765,NM_022916	chr12,chr12	+,-	B3GNT4,VPS33A	-63532,-632
chr9:42366850-42367299	chr9	+	42366884	42366960	True	NR_003670,NM_001012419,NM_001012421	chr9,chr9,chr9	-,+,+	KGFLP2,ANKRD20A3,ANKRD20A2	-347300,1342,1342
chr9:42366850-42367299	chr9	+	67925286	67925362	False	NR_027422,NM_001012419,NM_032250	chr9,chr9,chr9	-,+,+	FAM27B,ANKRD20A3,ANKRD20A1	-131097,1398,1398
chr5:53814803-53815154	chr5	+	53814820	53815178	True	NM_052870,NM_001145427,NM_019087,NM_001102575	chr5,chr5,chr5,chr5	+,+,-,+	SNX18,SNX18,ARL15,SNX18	-1278,-1282,-208417,-1278
chr15:42132525-42133011	chr15	+	42132675	42133049	True	NR_036195,NM_001114633	chr15,chr15	-,+	MIR4310,PLA2G4B	25750,-1715
chr3:45727585-45728844	chr3	+	45727741	45728830	True	NM_014016,NR_033947	chr3,chr3	+,-	SACM1L,LOC644714	1923,1595
chr1:1449329-1449781	chr1	+	1449337	1449713	True	NM_001170536,NM_001170535,NM_018188,NM_001114748	chr1,chr1,chr1,chr1	+,+,+,-	ATAD3A,ATAD3A,ATAD3A,C1orf70	-1478,-1865,-1865,26077
chr1:1449329-1449781	chr1	+	1410983	1411359	False	NR_026871,NM_031921	chr1,chr1	-,+	LOC441869,ATAD3B	-54333,-3870
chr19:542670-543145	chr19	+	542669	542879	True	NM_005317,NM_182577	chr19,chr19	+,-	GZMM,ODF3L2	1147,-67686
chr10:75339437-75340421	chr10	+	75339712	75340246	True	NM_152586,NM_004922	chr10,chr10	-,+	USP54,SEC24C	-4279,163884
chr7:131343412-131344924	chr7	+	131343732	131344652	True	NM_005397,NM_013255	chr7,chr7	-,+	PODXL,MKLN1	-102356,-331188
chr9:91605346-91605666	chr9	+	91605352	91605573	True	NM_001001938,NM_016848,NM_001142413,NM_005226	chr9,chr9,chr9,chr9	+,-,+,+	C9orf47,SHC3,C9orf47,S1PR3	204,188169,204,788
chr13:50655047-50655319	chr13	+	50655060	50655256	True	NR_029485,NR_002605	chr13,chr13	-,+	MIR15A,DLEU1	-31723,1157
chr9:13988093-13989132	chr9	+	13988390	13989152	True	NR_003920,NM_001190737	chr9,chr9	+,-	LOC389705,NFIB	1004172,324947
chr17:49339738-49340291	chr17	+	49339866	49340326	True	NM_017643,NM_016001	chr17,chr17	-,+	MBTD1,UTP18	-2439,-2021
chr11:33563398-33563652	chr11	+	33563406	33563652	True	NM_012194,NM_001166692	chr11,chr11	+,-	C11orf41,C11orf91	224,158684
chr1:184020940-184021151	chr1	+	184020940	184021200	True	NM_052965,NR_023349,NM_015101,NM_001127394	chr1,chr1,chr1,chr1	+,+,-,+	TSEN15,TSEN15,GLT25D2,TSEN15	-180,-180,-14077,-180
chr18:43682514-43683489	chr18	+	43682567	43683410	True	NR_026978,NM_138443,NM_004046,NM_001001937	chr18,chr18,chr18,chr18	+,+,-,-	HAUS1,HAUS1,ATP5A1,ATP5A1	887,887,-4280,839
chr7:44198065-44198378	chr7	+	44198193	44198427	True	NM_006555,NM_033507,NM_033508	chr7,chr7,chr7	+,-,-	YKT6,GCK,GCK	42150,510,510
chr1:224052005-224052509	chr1	+	224052055	224052549	True	NM_005426,NM_001748	chr1,chr1	-,+	TP53BP2,CAPN2	-18381,-151987
chr6:25279777-25280209	chr6	+	25280019	25280257	True	NM_017640,NM_001173977,NR_027626	chr6,chr6,chr6	+,+,-	LRRC16A,LRRC16A,CMAH	-414,-414,-141399
chr22:48969440-48970163	chr22	+	48969466	48970098	True	NR_033377,NM_015381	chr22,chr22	-,+	FLJ46257,FAM19A5	-942148,2019
chr16:67693767-67693981	chr16	+	67693798	67693980	True	NM_022914,NM_001082487,NM_001082486,NM_016948,NM_001012984,NM_032140,NM_001037281	chr16,chr16,chr16,chr16,chr16,chr16,chr16	-,-,-,+,+,-,+	ACD,ACD,ACD,PARD6A,C16orf86,C16orf48,PARD6A	788,788,788,870,6736,6698,870
chr9:94904040-94904527	chr1	+	202163876	202164081	True	NR_037664,NM_021636,NM_001017403	chr1,chr1,chr1	-,+,+	PTPN7,LGR6,LGR6	-33160,8823,-964
chr5:167722128-167722384	chr5	+	167722184	167722307	True	NM_001161661,NM_015238,NM_001161662,NR_029520	chr5,chr5,chr5,chr5	+,+,+,-	WWC1,WWC1,WWC1,MIR103-1	-3170,-3170,-3170,265722
chr19:58195350-58196589	chr19	+	58195476	58196628	True	NM_001085384,NM_138347	chr19,chr19	-,+	ZNF154,ZNF551	24001,-2170
chr20:62665552-62665796	chr20	+	62665556	62665690	True	NR_027687,NR_027686,NM_018419	chr20,chr20,chr20	+,+,-	NCRNA00176,NCRNA00176,SOX18	6,6,15339
chr6:105627241-105627490	chr6	+	105627278	105627424	True	NR_037157,NM_022361,NR_024539	chr6,chr6,chr6	+,-,-	C6orf112,POPDC3,POPDC3	-41767,484,-3148
chr19:55995794-55996155	chr19	+	55995912	55996096	True	NM_024710,NM_001144950,NM_020378,NM_033113,NM_001195267	chr19,chr19,chr19,chr19,chr19	-,+,+,+,+	ISOC2,SSC5D,NAT14,ZNF628,SSC5D	-22863,3773,460,-8264,3773
chr11:129130029-129131415	chr11	+	129130029	129131455	True	NM_001142685,NM_003658	chr11,chr11	-,+	ARHGAP32,BARX2	-67936,114425
chr14:94908406-94909096	chr14	+	94908508	94908922	True	NM_001080451,NM_006215	chr14,chr14	-,+	SERPINA11,SERPINA4	10250,118860
chr1:159773539-159773761	chr1	+	159773556	159773786	True	NM_001134233,NM_001004310	chr1,chr1	-,+	C1orf204,FCRL6	51401,-1434
chr11:126226383-126226661	chr11	+	126226447	126226709	True	NM_006278,NR_033839	chr11,chr11	+,-	ST3GAL4,FLJ39051	-402,-965
chr1:152944332-152945157	chr1	+	152944333	152945193	True	NM_006945,NM_173080	chr1,chr1	-,+	SPRR2D,SPRR4	68451,-1256
chr1:24514687-24516054	chr1	+	24515066	24516102	True	NM_170743,NM_173064,NM_173065,NR_027087	chr1,chr1,chr1,chr1	-,-,-,+	IL28RA,IL28RA,IL28RA,LOC284632	-1301,-1301,-1301,10627
chr17:56085896-56087462	chr17	+	56086162	56087110	True	NR_034041,NM_001078166,NM_006924,NM_080677	chr17,chr17,chr17,chr17	-,-,-,+	SRSF1,SRSF1,SRSF1,DYNLL2	-1455,-1455,-1455,73669
chr20:33421951-33423827	chr20	+	33422152	33423656	True	NR_002165,NR_028046,NM_014071	chr20,chr20,chr20	-,+,-	HMGB3P1,ACSS2,NCOA6	-1,39109,-8719
chr12:56710165-56710422	chr12	+	56710197	56710293	True	NM_014255,NM_001190991,NM_016584	chr12,chr12,chr12	-,-,+	CNPY2,CNPY2,IL23A	-69,-69,22369
chr20:3751278-3751911	chr20	+	3751539	3751699	True	NM_001039140,NM_004358	chr20,chr20	-,+	C20orf27,CDC25B	-3087,24701
chr8:132053148-132053386	chr8	+	132053236	132053368	True	NM_015137,NM_001115	chr8,chr8	+,-	EFR3A,ADCY8	862987,-401
chr13:48880663-48881710	chr13	+	48880664	48881550	True	NM_000321,NM_001162498	chr13,chr13	+,-	RB1,LPAR6	-2839,106159
chr7:24802590-24803401	chr7	+	24802609	24803387	True	NM_004403,NM_016447,NM_001127453,NM_001127454	chr7,chr7,chr7,chr7	-,+,-,-	DFNA5,MPP6,DFNA5,DFNA5	-4970,-189575,-5526,-4970
chr6:151562304-151562632	chr6	+	151562347	151562679	True	NM_005100,NM_020861	chr6,chr6	+,-	AKAP12,ZBTB2	-1264,150048
chr1:40025619-40026445	chr1	+	40025764	40026459	True	NR_003929,NM_181809,NR_002983	chr1,chr1,chr1	-,+,-	PPIEL,BMP8A,SNORA55	-394,-68497,6780
chr19:16288893-16289606	chr19	+	16289073	16289170	True	NM_014077,NM_054113	chr19,chr19	+,-	FAM32A,CIB3	7064,-4787
chr2:30142830-30143049	chr2	+	30142832	30143026	True	NM_004304,NM_001127399	chr2,chr2	-,+	ALK,YPEL5	1501,226723
chr9:35903529-35904655	chr9	+	35903545	35904526	True	NR_024283,NM_001004487,NM_001039792	chr9,chr9,chr9	+,-,+	LOC158376,OR13J1,HRCT1	4953,-33147,1662
chr14:104315739-104316266	chr14	+	104315852	104316188	True	NM_153046,NM_015316	chr14,chr14	+,-	TDRD9,PPP1R13B	78628,-1925
chr4:7105260-7105665	chr4	+	7105401	7105585	True	NR_027441,NM_152293	chr4,chr4	-,+	FLJ36777,TADA2B	-298,-60296
chr20:18447107-18447450	chr20	+	18447107	18447491	True	NR_036160,NM_006466,NM_001099407	chr20,chr20,chr20	+,+,-	MIR3192,POLR3F,C20orf12	3767,541,388
chr16:70470957-70471830	chr16	+	70470989	70471800	True	NM_145059,NM_006927	chr16,chr16	+,-	FUK,ST3GAL2	16697,1241
chr11:93799286-93800690	chr11	+	93799374	93800711	True	NM_001098672,NM_001144871	chr11,chr11	+,-	HEPHL1,C11orf90	-45054,-215706
chrX:106047852-106048440	chrX	+	106048136	106048487	True	NM_198881,NM_017752,NM_001171706	chrX,chrX,chrX	+,+,-	TBC1D8B,TBC1D8B,RIPPLY1	-2272,-2272,98124
chr17:66196394-66196738	chr17	+	66196394	66196780	True	NR_027283,NM_001174166	chr17,chr17	+,-	LOC440461,SLC16A6	-1644,90675
chr15:38751224-38751928	chr15	+	38751286	38751868	True	NM_001042429,NM_001128602,NM_173611	chr15,chr15,chr15	+,-,+	FAM98B,RASGRP1,FAM98B	-5010,105189,-5010
chr22:29705651-29705866	chr22	+	29705668	29705906	True	NM_006478,NM_152236,NM_152237,NM_001007279,NM_006477	chr22,chr22,chr22,chr22,chr22	+,+,+,-,-	GAS2L1,GAS2L1,GAS2L1,RASL10A,RASL10A	-2722,-2722,-2722,5892,5892
chr12:49962169-49962461	chr12	+	49962183	49962467	True	NM_006337,NM_012284,NM_001012300	chr12,chr12,chr12	-,+,-	MCRS1,KCNH3,MCRS1	-272,-29294,-1961
chr6:35315982-35316310	chr6	+	35316070	35316282	True	NM_001171819,NM_006238,NM_003214,NM_001171820,NM_001171818,NM_177435	chr6,chr6,chr6,chr6,chr6,chr6	+,+,-,+,+,+	PPARD,PPARD,TEAD3,PPARD,PPARD,PPARD	-5786,-5786,148629,-5786,-5786,-5786
chrX:47863521-47863942	chrX	+	47863589	47863907	True	NM_001007088,NM_205856,NM_006962,NM_001178099,NM_001079900	chrX,chrX,chrX,chrX,chrX	-,+,-,-,+	ZNF182,SPACA5,ZNF182,ZNF182,SPACA5B	-212,0,-212,-195,3262
chrX:47863521-47863942	chrX	+	47986726	47986776	False	NM_205856,NR_033730,NM_001079900	chrX,chrX,chrX	+,-,+	SPACA5,ZNF630,SPACA5B	-174,-55701,3262
chr12:8028026-8028426	chr12	+	8028192	8028291	True	NM_153449,NM_024865	chr12,chr12	-,+	SLC2A14,NANOG	-2697,-86259
chr20:32399592-32400801	chr20	+	32399926	32400685	True	NM_176812,NM_183397	chr20,chr20	+,-	CHMP4B,PXMP4	-867,-91790
chr7:148723062-148723547	chr7	+	148723061	148723306	True	NM_004911,NM_020781	chr7,chr7	-,+	PDIA4,ZNF398	2527,100201
chr2:23699683-23700031	chr2	+	23699703	23700011	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	449973,-91456
chr11:105937043-105938260	chr11	+	105937350	105938016	True	NM_015423,NM_152433	chr11,chr11	+,-	AASDHPPT,KBTBD3	10275,10507
chr10:75532938-75533464	chr10	+	75533079	75533447	True	NM_003635,NM_203298,NM_173540	chr10,chr10,chr10	-,+,+	NDST2,CHCHD1,FUT11	38192,8360,-1081
chr14:51553195-51553803	chr14	+	51553246	51553558	True	NM_052978,NM_015163,NM_030755	chr14,chr14,chr14	-,-,+	TRIM9,TRIM9,TMX1	8914,8914,153327
chrX:110342499-110343642	chrX	+	110342547	110343613	True	NM_002578,NM_014289	chrX,chrX	+,-	PAK3,CAPN6	-3224,170211
chr2:237477233-237478561	chr2	+	237477310	237478443	True	NM_020311,NM_024726	chr2,chr2	+,-	CXCR7,IQCA1	-64,-61218
chr3:15255477-15255950	chr3	+	15255703	15255910	True	NM_014296,NR_027927	chr3,chr3	+,-	CAPN7,COL6A4P1	-8028,-8237
chr17:72734066-72734867	chr17	+	72734083	72734745	True	NM_001163989,NM_001163990,NM_001006638,NM_139018	chr17,chr17,chr17,chr17	+,+,+,-	RAB37,RAB37,RAB37,CD300LF	-1176,-779,-779,-24975
chr17:79303663-79304103	chr17	+	79303813	79304149	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	69390,375
chr2:177015845-177016214	chr2	+	177015894	177016246	True	NR_033979,NM_014621,NR_029609	chr2,chr2,chr2	-,+,+	LOC401022,HOXD4,MIR10B	37490,34,-914
chr6:24721140-24721526	chr6	+	24721199	24721567	True	NM_030939,NM_015895	chr6,chr6	-,+	C6orf62,GMNN	-1796,53596
chr5:56593210-56594082	chr5	+	56593478	56594112	True	NM_001127236,NM_001017992	chr5,chr5	+,-	GPBP1,ACTBL2	-83635,184574
chr1:145513009-145514966	chr1	+	145513133	145514194	True	NR_002328,NM_003846,NM_001184795,NM_005105	chr1,chr1,chr1,chr1	-,+,+,+	GNRHR2,PEX11B,PEX11B,RBM8A	1941,1970,2365,-5632
chr12:6659160-6659583	chr12	+	6659334	6659534	True	NM_001039670,NM_001193457,NM_080730,NR_036467,NM_002046	chr12,chr12,chr12,chr12,chr12	-,-,-,-,+	IFFO1,IFFO1,IFFO1,IFFO1,GAPDH	5765,5765,5765,5765,-15728
chr11:5639454-5640848	chr11	+	5640109	5640870	True	NM_033034,NM_021616,NM_001003827	chr11,chr11,chr11	-,+,+	TRIM5,TRIM34,TRIM34	65519,5336,303
chr17:8126483-8126902	chr17	+	8126491	8126923	True	NR_026951,NM_012393	chr17,chr17	-,+	C17orf44,PFAS	488,25672
chr5:159653035-159653422	chr5	+	159653191	159653305	True	NM_001445,NM_024565	chr5,chr5	+,-	FABP6,CCNJL	3131,86318
chr17:9478147-9478717	chr17	+	9478193	9478771	True	NM_145054,NR_033656,NM_001080556,NM_004853	chr17,chr17,chr17,chr17	+,-,+,-	WDR16,STX8,WDR16,STX8	1172,560,1172,560
chr3:150418020-150418529	chr3	+	150418165	150418340	True	NM_016275,NM_152394	chr3,chr3	+,-	SELT,FAM194A	-97158,3453
chr6:110526261-110527432	chr6	+	110526584	110527306	True	NM_003931,NM_015891	chr6,chr6	-,+	WASF1,CDC40	-25377,-25022
chr16:524312-524987	chr16	+	524332	524982	True	NR_024121,NM_001142272	chr16,chr16	-,+	NCRNA00235,RAB11FIP3	52475,-47
chr16:1306437-1306743	chr16	+	1306572	1306702	True	NM_024164,NM_012217	chr16,chr16	-,+	TPSB2,TPSD1	-26387,-350
chr6:168593129-168593803	chr6	+	168593134	168593643	True	NM_030615,NM_024919	chr6,chr6	+,-	KIF25,FRMD1	-174633,-113295
chrX:33016408-33017747	chrX	+	33016580	33017548	True	NM_004007,NM_152631	chrX,chrX	-,+	DMD,FAM47B	20823,1943364
chr2:177016214-177016505	chr2	+	177016264	177016472	True	NR_033979,NM_014621,NR_029609	chr2,chr2,chr2	-,+,+	LOC401022,HOXD4,MIR10B	37264,-202,-1284
chr17:71189187-71189485	chr17	+	71189237	71189405	True	NM_018714,NM_001098832	chr17,chr17	+,-	COG1,FAM104A	-115,39178
chrX:154688918-154689159	chrX	+	154689049	154689129	True	NR_036049,NM_001007524,NM_001007523,NM_012151,NM_080720,NR_036260,NR_036259,NM_001017991,NM_001017990	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,-,-,-,-,+,+,-,-	MIR1184-1,F8A3,F8A2,F8A1,H2AFB3,MIR1184-3,MIR1184-2,H2AFB2,H2AFB1	-1923,-788,-788,-773,523,-1923,-1923,515,523
chrX:154688918-154689159	chrX	-	154113783	154113863	False	NR_036049,NM_001007524,NM_001007523,NM_012151,NM_080720,NR_036260,NM_019863,NR_036259,NM_001017990	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,-,-,-,+	MIR1184-1,F8A3,F8A2,F8A1,H2AFB3,MIR1184-3,F8,MIR1184-2,H2AFB1	1921,786,786,771,-523,1921,765,1921,-523
chrX:154688918-154689159	chrX	-	154610894	154610974	False	NR_036049,NM_001007524,NM_001007523,NM_012151,NM_080720,NR_036260,NR_036259,NM_001017991,NM_001017990	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,-,-,+,+	MIR1184-1,F8A3,F8A2,F8A1,H2AFB3,MIR1184-3,MIR1184-2,H2AFB2,H2AFB1	1924,789,789,774,-523,1924,1924,-515,-523
chr7:107304327-107306300	chr7	+	107304976	107306342	True	NM_000441,NR_028137	chr7,chr7	+,-	SLC26A4,LOC286002	-3947,-2733
chr12:32834814-32835157	chr12	+	32834944	32835071	True	NM_001040436,NM_012062,NM_005690,NM_012063	chr12,chr12,chr12,chr12	-,+,+,+	YARS2,DNM1L,DNM1L,DNM1L	73875,-2866,-2866,-2866
chr12:88536098-88536674	chr12	+	88536153	88536666	True	NM_025114,NM_181783	chr12,chr12	-,+	CEP290,TMTC3	-160,-131
chr1:1335429-1335648	chr1	+	1335433	1335695	True	NM_001039577,NM_017971,NR_015434,NM_030937	chr1,chr1,chr1,chr1	-,-,+,-	CCNL2,MRPL20,LOC148413,CCNL2	-715,7048,-574,-715
chr1:160523253-160523697	chr1	+	160523252	160523630	True	NM_001184879,NM_020335	chr1,chr1	-,+	CD84,VANGL2	25726,-152939
chr16:224926-225776	chr16	+	225265	225828	True	NM_001077350,NM_000558,NM_000517,NM_001003938,NM_005331	chr16,chr16,chr16,chr16,chr16	-,+,+,+,+	NPRL3,HBA1,HBA2,HBM,HBQ1	-36593,850,-2470,-9343,4504
chr16:5118346-5119977	chr16	+	5119105	5119970	True	NM_001098514,NM_019109,NM_152459	chr16,chr16,chr16	-,+,-	C16orf89,ALG1,C16orf89	-2994,1839,-2994
chr15:75742211-75742999	chr15	+	75742410	75742699	True	NM_001145357,NM_015477,NM_024608,NM_001145358	chr15,chr15,chr15,chr15	-,-,+,-	SIN3A,SIN3A,NEIL1,SIN3A	5475,1277,-103130,1438
chr12:52915907-52916201	chr12	+	52915957	52916165	True	NM_002284,NM_000424	chr12,chr12	+,-	KRT86,KRT5	-220359,-1714
chr14:25520358-25520996	chr14	+	25520491	25520968	True	NM_015299,NM_014178	chr14,chr14	+,-	KHNYN,STXBP6	-621408,-1396
chr5:168009745-168010655	chr5	+	168009910	168010394	True	NM_024594,NR_031721	chr5,chr5	-,+	PANK3,MIR103-1AS	-3296,-22071
chr15:74501453-74501783	chr15	+	74501518	74501806	True	NM_022369,NM_001199042,NM_001199040,NM_001199041,NM_001142619,NM_001142618,NM_001142617,NM_001142620,NM_025055	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,-,-,-,-,-,-,+	STRA6,STRA6,STRA6,STRA6,STRA6,STRA6,STRA6,STRA6,CCDC33	-6298,-6298,290,-1123,-147,-5962,-147,-147,26860
chr17:78448873-78449422	chr17	+	78448946	78449392	True	NM_002522,NM_173627	chr17,chr17	-,+	NPTX1,FLJ35220	1062,-60030
chr3:13114646-13114855	chr3	+	13114726	13114794	True	NM_012298,NM_001134382	chr3,chr3	+,-	CAND2,IQSEC1	-276606,-109
chrX:70502294-70503488	chrX	+	70502397	70503456	True	NM_007363,NM_001171162,NM_001145410,NM_001145409,NM_001145408	chrX,chrX,chrX,chrX,chrX	+,-,+,+,+	NONO,ZMYM3,NONO,NONO,NONO	168,-27350,168,168,168
chr7:102253931-102254918	chr7	+	102253955	102254939	True	NM_001079877,NM_001031618,NM_006989	chr7,chr7,chr7	-,+,-	RASA4,SPDYE2,RASA4	2316,35832,2316
chr7:102253931-102254918	chr7	+	102154976	102155960	False	NM_006234,NM_001031618	chr7,chr7	-,+	POLR2J,SPDYE2	-35595,35718
chr19:48973393-48973626	chr19	+	48973614	48973674	True	NM_017457,NM_004228,NM_001080434,NM_170720	chr19,chr19,chr19,chr19	+,+,-,+	CYTH2,CYTH2,LMTK3,KCNJ14	-1200,-1200,42822,-9159
chr5:128796353-128796852	chr5	+	128796437	128796733	True	NM_133638,NM_001999	chr5,chr5	+,-	ADAMTS19,FBN2	-389,-922702
chr5:100237683-100238779	chr5	+	100237688	100238651	True	NM_005668,NM_175052,NM_198507	chr5,chr5,chr5	-,-,+	ST8SIA4,ST8SIA4,FAM174A	387,370,-366617
chr17:72683944-72684408	chr17	+	72683990	72684415	True	NM_175738,NM_139018	chr17,chr17	+,-	RAB37,CD300LF	-16787,24750
chr2:179318809-179320119	chr2	+	179319094	179320058	True	NM_001042702,NM_001139518,NM_001139517,NM_003690	chr2,chr2,chr2,chr2	+,-,-,-	DFNB59,PRKRA,PRKRA,PRKRA	-2990,-3739,-3610,-3136
chr13:25875146-25875699	chr13	+	25875270	25875710	True	NM_001008564,NM_004685,NM_014089	chr13,chr13,chr13	+,-,+	NUPL1,MTMR6,NUPL1	23,-13566,23
chr1:231294807-231295905	chr1	+	231294878	231295886	True	NM_152379,NM_001004342	chr1,chr1	-,+	C1orf131,TRIM67	81088,2787
chr1:154962195-154962916	chr1	+	154962282	154962850	True	NM_025207,NM_003029,NM_018655,NM_001184892,NM_001184891,NM_201398	chr1,chr1,chr1,chr1,chr1,chr1	+,-,+,+,+,+	FLAD1,SHC1,LENEP,FLAD1,FLAD1,FLAD1	-6570,-15323,3211,-6570,-6570,-6570
chr12:31797105-31797336	chr12	+	31797246	31797382	True	NM_001135864,NM_144973	chr12,chr12	+,-	METTL20,DENND5B	2711,-53294
chr1:62208498-62208759	chr1	+	62208661	62208727	True	NM_176877,NM_032027	chr1,chr1	+,-	INADL,TM2D1	-563,-17566
chr3:183416775-183417709	chr3	+	183416790	183417682	True	NM_024871,NM_018023	chr3,chr3	-,+	MAP6D1,YEATS2	125761,-1235
chr8:93075559-93076996	chr8	+	93075738	93076784	True	NM_004349,NM_052832	chr8,chr8	-,+	RUNX1T1,SLC26A7	-547,-814283
chr13:43167215-43168306	chr13	+	43167299	43168105	True	NM_003701,NM_001002264	chr13,chr13	+,-	TNFSF11,EPSTI1	-19059,398322
chrX:43725699-43726472	chrX	+	43725989	43726499	True	NM_000898,NM_000240	chrX,chrX	-,+	MAOB,MAOA	15272,-210631
chr1:32672478-32673919	chr1	+	32672695	32673917	True	NM_001160042,NM_018134,NM_001099434,NM_024296,NM_019118	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	IQCC,IQCC,DCDC2B,CCDC28B,TMEM234	-1510,-1510,777,-6544,14061
chr16:2197213-2197655	chr16	+	2197247	2197587	True	NR_002736,NM_014353,NM_032271	chr16,chr16,chr16	-,+,+	SNORD60,RAB26,TRAF7	7569,1063,8211
chr1:11992740-11993454	chr1	+	11992970	11993162	True	NM_000302,NM_138346	chr1,chr1	+,-	PLOD1,KIAA2013	1561,-6485
chr4:74583718-74584117	chr4	+	74583728	74584139	True	NM_000584,NM_201431	chr4,chr4	+,-	IL8,RASSF6	22083,-97388
chr1:53924984-53925358	chr1	+	53925093	53925295	True	NR_002314,NM_033067	chr1,chr1	-,+	FLJ40434,DMRTB1	-19400,-72
chr1:203195255-203196001	chr1	+	203195341	203196000	True	NM_003465,NM_006763	chr1,chr1	-,+	CHIT1,BTG2	2923,78663
chr17:75448403-75448641	chr17	+	75448430	75448656	True	NM_001113496,NR_036200	chr17,chr17	+,-	SEPT9,MIR4316	-1868,-55294
chr16:792039-792278	chr16	+	792173	792297	True	NM_032304,NM_022493	chr16,chr16	+,-	HAGHL,NARFL	-14960,-1176
chr10:106089001-106090723	chr10	+	106089120	106090740	True	NM_001008723,NM_033397	chr10,chr10	+,-	CCDC147,ITPRIP	22781,2973
chr11:66115379-66115980	chr11	+	66115487	66116005	True	NM_015399,NM_006876,NM_001024957,NM_153266	chr11,chr11,chr11,chr11	-,-,-,+	BRMS1,B3GNT1,BRMS1,TMEM151A	-2905,-326,-2905,-56165
chr19:52493108-52494297	chr19	+	52493301	52494061	True	NM_024840,NM_021632	chr19,chr19	+,-	ZNF613,ZNF350	-62671,-3222
chr5:176039162-176040173	chr5	+	176039181	176040195	True	NM_001099408,NM_052899	chr5,chr5	+,-	EIF4E1B,GPRIN1	17487,-2050
chr20:62481947-62482470	chr20	+	62482031	62482519	True	NM_080622,NM_025224	chr20,chr20	+,-	ABHD16B,ZBTB46	10046,-45175
chr10:101839765-101840504	chr10	+	101839859	101840165	True	NR_024130,NM_001308	chr10,chr10	+,-	DNMBP-AS1,CPN1	-152945,1543
chr10:45496744-45497094	chr10	+	45496750	45497140	True	NM_001039380,NM_006963	chr10,chr10	-,+	C10orf25,ZNF22	-280,-528
chr9:130859562-130860545	chr9	+	130859619	130860527	True	NM_001006643,NR_033374,NM_052901,NM_001006642	chr9,chr9,chr9,chr9	+,-,+,+	SLC25A25,LOC100289019,SLC25A25,SLC25A25	308,20536,289,-5542
chr17:19014198-19014513	chr17	+	19014252	19014312	True	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	16469,-63916
chr17:19014198-19014513	chr17	+	19140415	19140475	False	NM_014964,NM_148921,NM_001102664,NR_031591	chr17,chr17,chr17,chr17	+,+,+,-	EPN2,EPN2,EPN2,MIR1180	214,214,214,107462
chr12:52967306-52967675	chr12	+	52967376	52967700	True	NM_175053,NM_002284	chr12,chr12	-,+	KRT74,KRT86	-41,-271778
chr11:75063643-75063911	chr11	+	75063679	75063943	True	NM_020251,NM_004041,NM_001005	chr11,chr11,chr11	-,-,+	ARRB1,ARRB1,RPS3	-804,-804,46618
chr9:99617052-99617385	chr9	+	99617072	99617432	True	NR_028350,NM_001001662	chr9,chr9	+,-	LOC441454,ZNF782	53924,-683
chr9:130362103-130362490	chr9	+	130362127	130362203	True	NM_001032221,NM_001035534	chr9,chr9	+,-	STXBP1,FAM129B	12282,-20859
chr12:24722940-24724178	chr12	+	24723347	24724209	True	NR_030625,NM_152989	chr12,chr12	+,-	MIR920,SOX5	-358043,-7967
chr16:23689420-23689915	chr16	+	23689541	23689939	True	NM_005030,NM_033266	chr16,chr16	+,-	PLK1,ERN2	261,34932
chr10:85980788-85982087	chr10	+	85980801	85982091	True	NM_001017924,NM_001012720	chr10,chr10	-,+	LRIT2,RGR	3243,22717
chr1:55104121-55105313	chr1	+	55104536	55105330	True	NR_026782,NR_037639,NM_001039464,NR_037640,NR_037641,NM_176782	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-	HEATR8,HEATR8-TTC4,HEATR8,HEATR8-TTC4,HEATR8-TTC4,FAM151A	2096,2096,2096,2096,2096,-15336
chr19:40949426-40949631	chr19	+	40949486	40949662	True	NM_013368,NM_020971,NM_203344	chr19,chr19,chr19	-,+,-	SERTAD3,SPTBN4,SERTAD3	-981,23463,670
chr8:144662265-144662615	chr8	+	144662429	144662577	True	NM_145201,NM_001100878,NM_032862	chr8,chr8,chr8	-,-,+	NAPRT1,C8orf73,TIGD5	-1916,-7501,17496
chr3:129611513-129611817	chr3	+	129611568	129611714	True	NM_001128224,NR_037893	chr3,chr3	-,+	TMCC1,LOC100507032	755,999
chr5:786581-786800	chr5	+	786655	786717	True	NM_001166260,NM_024786	chr5,chr5	+,-	TRIP13,ZDHHC11	106251,64434
chr5:786581-786800	chr5	+	695323	695385	False	NM_018140,NM_007030	chr5,chr5	+,-	CEP72,TPPP	-82969,-1813
chr6:46660098-46661475	chr6	+	46660101	46661391	True	NM_016593,NM_001010870,NM_001168359	chr6,chr6,chr6	-,+,+	CYP39A1,TDRD6,TDRD6	-39578,-4540,-4540
chr11:1859512-1859769	chr11	+	1859640	1859702	True	NM_001145829,NR_036185,NM_138567,NM_001145841,NM_003282	chr11,chr11,chr11,chr11,chr11	+,-,+,+,+	TNNI2,MIR4298,SYT8,TNNI2,TNNI2	1016,21114,-4017,1729,530
chr9:94905353-94907209	chr9	+	94905420	94907208	True	NM_178324,NR_027341	chr9,chr9	-,+	SPTLC1,C9orf44	-27730,-1724
chr1:110995871-110996459	chr1	+	110995870	110996316	True	NM_032414,NM_006402	chr1,chr1	+,-	PROK1,HBXIP	-2139,-45324
chr10:49086270-49086658	chr10	+	49086410	49086495	True	NM_001137548,NM_002750	chr10,chr10	-,+	FAM25C,MAPK8	121381,523191
chr10:49086270-49086658	chr10	+	88910134	88910205	False	NM_019054,NM_005271	chr10,chr10	+,-	FAM35A,GLUD1	-55236,-55358
chr10:49086270-49086658	chr10	+	46896660	46896745	False	NR_027632,NM_181519	chr10,chr10	+,-	FAM35B,SYT15	895,73907
chr10:49086270-49086658	chr10	+	47378740	47378825	False	NR_024495,NR_027634	chr10,chr10	-,+	LOC642826,FAM35B2	-135246,894
chr5:125962457-125964058	chr5	+	125962797	125963996	True	NM_001202404,NM_207408	chr5,chr5	-,+	ALDH7A1,C5orf48	-31715,3417
chr19:13000716-13001892	chr19	+	13000737	13001744	True	NM_013976,NM_001375,NM_000159,NM_006563	chr19,chr19,chr19,chr19	+,-,+,-	GCDH,DNASE2,GCDH,KLF1	229,-8402,229,-2720
chr6:88402801-88403167	chr6	+	88403042	88403147	True	NM_018064,NM_001197259,NR_002767	chr6,chr6,chr6	-,+,-	AKIRIN2,ORC3,AKIRIN2-AS1	8899,-103321,7847
chr3:182696700-182697645	chr3	+	182696769	182697549	True	NM_014616,NM_020640	chr3,chr3	+,-	ATP11B,DCUN1D1	-185536,827
chr12:31813442-31814158	chr12	+	31813482	31814207	True	NM_173802,NM_001135863,NM_001113402	chr12,chr12,chr12	+,+,-	METTL20,METTL20,AMN1	-1421,-933,67952
chr13:70698832-70700029	chr13	+	70698882	70700003	True	NR_002717,NM_020866	chr13,chr13	+,-	ATXN8OS,KLHL1	-17598,-16257
chr7:86647091-86647648	chr7	+	86647272	86647350	True	NR_030672,NM_001142326	chr7,chr7	-,+	KIAA1324L,DMTF1	22256,134326
chr5:180579598-180579852	chr5	+	180579609	180579709	True	NM_203297,NM_206880	chr5,chr5	-,+	TRIM7,OR2V2	48271,2233
chr5:134096712-134097091	chr5	+	134097057	134097120	True	NM_014829,NM_016103	chr5,chr5	+,-	DDX46,SAR1B	-2655,-128524
chr14:58859901-58861479	chr14	+	58860171	58860855	True	NM_012460,NM_207377	chr14,chr14	-,+	TIMM9,TOMM20L	33427,1788
chr4:174310541-174311927	chr4	+	174310885	174311976	True	NM_007281,NM_003864	chr4,chr4	-,+	SCRG1,SAP30	8691,-18852
chr1:41452025-41452565	chr1	+	41452120	41452551	True	NM_001905,NM_001168247	chr1,chr1	+,-	CTPS,SLFNL1	-7164,34897
chr1:160283496-160283883	chr1	+	160283748	160283880	True	NR_002190,NR_036493	chr1,chr1	+,-	SUMO1P3,PEX19	3174,-28807
chr9:14993504-14993762	chr9	+	14993630	14993704	True	NR_003920,NM_144966	chr9,chr9	+,-	LOC389705,FREM1	-356,-82637
chr20:17989038-17990721	chr20	+	17989160	17990087	True	NM_152227,NM_052865	chr20,chr20	-,+	SNX5,C20orf72	-39670,-39451
chr20:61583828-61584106	chr20	+	61583882	61584104	True	NM_022105,NM_022082	chr20,chr20	-,+	DIDO1,SLC17A9	-14578,66
chr1:169074505-169074775	chr1	+	169074509	169074791	True	NM_001677,NM_013330	chr1,chr1	+,-	ATP1B1,NME7	1155,262445
chr6:43425266-43425912	chr6	+	43425509	43425741	True	NM_023932,NM_206539,NM_001146016	chr6,chr6,chr6	-,-,+	DLK2,DLK2,TJAP1	-2223,-1723,19519
chr18:44086059-44087119	chr18	+	44086186	44087104	True	NM_001173129,NM_152470	chr18,chr18	-,+	LOXHD1,RNF165	11995,-172051
chr2:122510345-122512102	chr2	+	122510631	122512020	True	NM_032390,NM_004622	chr2,chr2	-,+	MKI67IP,TSN	-16128,1100
chr11:65080808-65081010	chr11	+	65080972	65081038	True	NM_001077241,NM_006779	chr11,chr11	-,+	SLC25A45,CDC42EP2	69154,1292
chrX:151088077-151088731	chrX	+	151088112	151088724	True	NR_029973,NM_002362,NM_001011548,NM_001011549,NM_001011550	chrX,chrX,chrX,chrX,chrX	-,+,+,+,+	MIR452,MAGEA4,MAGEA4,MAGEA4,MAGEA4	39510,-3454,-6802,-2766,-1403
chr6:160513779-160514229	chr6	+	160513818	160514188	True	NR_003288,NM_003058	chr6,chr6	+,-	LOC729603,SLC22A2	51,165825
chr8:59337657-59338688	chr8	+	59337738	59338706	True	NM_000780,NM_001077619	chr8,chr8	-,+	CYP7A1,UBXN2B	74064,-13966
chr18:29031756-29032404	chr18	+	29031757	29032184	True	NM_004775,NM_001944	chr18,chr18	-,+	B4GALT6,DSG3	232565,-4077
chr12:40013606-40013831	chr12	+	40013665	40013875	True	NM_001031748,NM_005164	chr12,chr12	+,-	C12orf40,ABCD2	6096,18
chr2:120435674-120435974	chr2	+	120435679	120435989	True	NM_001105199,NM_001105198,NM_002980,NM_030577	chr2,chr2,chr2,chr2	+,+,-,+	TMEM177,TMEM177,SCTR,TMEM177	753,753,-153651,753
chrX:138528154-138529205	chrX	+	138529088	138529194	True	NR_028597,NM_001171877	chrX,chrX	+,-	SRD5A1P1,MCF2	-161,195856
chr5:153822969-153824637	chr5	+	153823141	153824413	True	NR_037897,NM_001131062,NM_024632,NR_024084,NM_001131063	chr5,chr5,chr5,chr5,chr5	-,+,+,+,+	FLJ38109,SAP30L,SAP30L,SAP30L,SAP30L	1019,1103,1103,1103,1103
chr9:72874526-72875019	chr9	+	72874544	72874713	True	NM_001206,NM_015110	chr9,chr9	-,+	KLF9,SMC5	154910,-717
chr20:4702514-4703424	chr20	+	4702638	4703438	True	NR_024267,NM_012409	chr20,chr20	-,+	PRNT,PRND	17926,-133
chr11:59225209-59226095	chr11	+	59225218	59225786	True	NM_001004708,NM_001001954	chr11,chr11	+,-	OR4D6,OR5A2	-835,-34792
chr3:119395766-119395988	chr3	+	119395766	119395835	True	NM_033364,NM_005694	chr3,chr3	+,-	C3orf15,COX17	26033,459
chr6:33589363-33589766	chr6	+	33589410	33589676	True	NR_027908,NM_002224	chr6,chr6	-,+	C6orf227,ITPR3	-28295,-305
chr3:139189047-139189464	chr3	+	139189061	139189513	True	NM_004164,NM_020191	chr3,chr3	-,+	RBP2,MRPS22	5889,-126251
chr18:19746695-19747082	chr18	+	19746821	19747125	True	NM_005257,NM_172241	chr18,chr18	+,-	GATA6,CTAGE1	2290,250803
chr8:74898440-74900311	chr8	+	74898732	74900053	True	NM_005648,NM_015364,NM_001195797	chr8,chr8,chr8	-,+,+	TCEB1,LY96,LY96	-14210,3510,3510
chr8:22422681-22422900	chr8	+	22422682	22422860	True	NR_027715,NM_001018003	chr8,chr8	-,+	FLJ14107,SORBS3	76912,318
chr20:48727978-48728727	chr20	+	48727987	48728761	True	NM_021988,NM_001032288,NM_022442,NM_005194,NM_199144	chr20,chr20,chr20,chr20,chr20	-,-,-,+,-	UBE2V1,UBE2V1,UBE2V1,CEBPB,UBE2V1	3783,999,3780,78614,3783
chr6:2999431-2999636	chr6	+	2999516	2999606	True	NR_033884,NM_000904	chr6,chr6	-,+	LOC401233,NQO2	25449,460
chr1:6297804-6298336	chr1	+	6297862	6298250	True	NM_012405,NM_001024598	chr1,chr1	-,+	ICMT,HES3	-1818,6001
chr3:51891509-51891753	chr17	-	17816825	17816919	False	NM_001130091,NM_001033551	chr17,chr17	+,-	LRRC48,TOM1L2	59207,58915
chr3:51891509-51891753	chr3	+	51891579	51891687	True	NM_001145059,NM_203424	chr3,chr3	-,+	IQCF5,IQCF2	17965,3957
chr14:105393267-105393901	chr14	+	105393269	105393937	True	NM_138420,NM_138790	chr14,chr14	-,+	AHNAK2,PLD4	50807,-2133
chr11:9480918-9481810	chr11	+	9481184	9481750	True	NM_003442,NR_036539	chr11,chr11	+,-	ZNF143,LOC644656	761,549
chr6:20267527-20267821	chr6	+	20267532	20267869	True	NM_001949,NM_001080480	chr6,chr6	+,-	E2F3,MBOAT1	134267,-54862
chr6:99962218-99962851	chr6	+	99962217	99962838	True	NM_001080481,NM_001195131	chr6,chr6	-,+	USP45,LOC100130890	464,6031
chr13:28196415-28197171	chr13	+	28196478	28197207	True	NM_015972,NM_152705,NM_153371	chr13,chr13,chr13	+,+,-	POLR1D,POLR1D,LNX2	-500,-526,-1758
chr17:46184315-46184577	chr17	+	46184331	46184601	True	NM_001127228,NM_152244,NM_006807,NM_013323	chr17,chr17,chr17,chr17	-,+,-,+	CBX1,SNX11,CBX1,SNX11	-5448,318,-5771,345
chr14:70246762-70248003	chr14	+	70246942	70248052	True	NR_029378,NM_006925	chr14,chr14	-,+	LOC100289511,SRSF5	-12512,-13160
chr10:75759030-75760464	chr10	+	75759091	75760019	True	NM_003373,NM_001001791,NM_014000	chr10,chr10,chr10	+,-,+	VCL,C10orf55,VCL	-1270,-76556,-1270
chr9:124988606-124988826	chr9	+	124988645	124988773	True	NM_199160,NM_001173512,NM_014368	chr9,chr9,chr9	-,+,-	LHX6,MRRF,LHX6	2296,38108,2296
chr7:142984910-142985171	chr7	+	142984913	142985179	True	NM_032983,NM_032982,NM_153345,NM_014690	chr7,chr7,chr7,chr7	+,+,+,-	CASP2,CASP2,TMEM139,FAM131B	128,128,-2901,74044
chr11:9115519-9116158	chr11	+	9115535	9116119	True	NM_020974,NM_001170690,NR_027713	chr11,chr11,chr11	-,-,+	SCUBE2,SCUBE2,KRT8P41	-2385,-2385,31
chr7:95064072-95064273	chr7	+	95064167	95064233	True	NM_145872,NM_001018161,NM_000305	chr7,chr7,chr7	+,-,-	ASB4,PON2,PON2	50979,201,201
chr19:12863958-12864653	chr19	+	12864056	12864702	True	NM_024038,NM_017682	chr19,chr19	-,+	C19orf43,BEST2	-18527,-700
chrX:71495554-71496013	chrX	+	71495606	71495900	True	NM_001170747,NM_001007	chrX,chrX	+,-	PIN4,RPS4X	-94131,1291
chrX:49595600-49596775	chrX	+	49595615	49596811	True	NM_007003,NR_026742	chrX,chrX	+,-	PAGE4,LOC158572	-1760,47198
chr5:180634262-180634756	chr5	+	180634460	180634734	True	NM_203295,NM_203294,NM_203297,NM_203296,NM_033342,NM_203293,NM_033549	chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,-,-,+	TRIM7,TRIM7,TRIM7,TRIM7,TRIM7,TRIM7,TRIM41	-3120,-3120,-6530,-3120,-2283,-2283,15571
chr11:114310243-114310519	chr11	+	114310359	114310483	True	NM_015523,NM_019021	chr11,chr11	+,-	REXO2,C11orf71	-302,-39220
chr4:39527842-39528389	chr4	+	39527857	39528421	True	NR_026854,NM_001184701,NM_001184700,NM_003359	chr4,chr4,chr4,chr4	+,-,-,-	LOC401127,UGDH,UGDH,UGDH	-46042,847,847,847
chr19:49220260-49220950	chr19	+	49220341	49220530	True	NM_001130915,NM_001097638,NM_182574	chr19,chr19,chr19	-,+,-	MAMSTR,FUT2,MAMSTR	2497,-21164,-127
chr11:65685040-65685241	chr11	+	65685047	65685173	True	NM_031450,NM_001135635,NM_006442	chr11,chr11,chr11	-,-,+	C11orf68,C11orf68,DRAP1	1408,1408,1554
chr20:25038537-25038788	chr20	+	25038536	25038786	True	NM_003650,NM_032501	chr20,chr20	+,-	CST7,ACSS1	-108721,880
chr2:27664168-27664585	chr2	+	27664214	27664631	True	NM_177983,NM_173853,NM_001168364	chr2,chr2,chr2	-,+,+	PPM1G,KRTCAP3,KRTCAP3	-31718,601,601
chr3:47621198-47621890	chr3	+	47621290	47621746	True	NM_006574,NM_015466	chr3,chr3	-,+	CSPG5,PTPN23	-931,-198850
chr20:35170520-35171279	chr20	+	35170655	35171257	True	NM_181526,NM_032214,NM_006097	chr20,chr20,chr20	+,-,+	MYL9,SLA2,MYL9	-809,103351,-809
chr5:147213882-147214985	chr5	+	147213976	147214918	True	NM_003122,NM_054023	chr5,chr5	-,+	SPINK1,SCGB3A2	-2716,43355
chr5:180021263-180022599	chr5	+	180021266	180022492	True	NM_052863,NM_015455	chr5,chr5	-,+	SCGB3A1,CNOT6	-2779,-99900
chr10:35466768-35467419	chr10	+	35466880	35467378	True	NM_001198777,NM_182769,NM_182770	chr10,chr10,chr10	-,+,+	CUL2,CREM,CREM	-87310,-2408,-2408
chr19:47774902-47775351	chr19	+	47774905	47775393	True	NR_037675,NM_178511,NM_001127242	chr19,chr19,chr19	+,+,-	PRR24,PRR24,BBC3	2265,2209,-38882
chr11:3828696-3829295	chr11	+	3828866	3829256	True	NR_027018,NM_005387,NM_139131,NM_139132,NM_014489,NR_027016,NR_027017,NR_027014,NR_027015,NM_001145438,NM_016320	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,-,-,-,+,+,+,+,+,+,-	PGAP2,NUP98,NUP98,NUP98,PGAP2,PGAP2,PGAP2,PGAP2,PGAP2,PGAP2,NUP98	-17,-9844,-9844,-9844,509,509,-9735,-9971,-9793,-9876,-9844
chr7:87258425-87258963	chr7	+	87258507	87258865	True	NM_000927,NM_001134406,NM_001134405,NM_138290	chr7,chr7,chr7,chr7	-,+,+,+	ABCB1,RUNDC3B,RUNDC3B,RUNDC3B	83834,-829,-829,-829
chr6:14816501-14817621	chr6	+	14816525	14817655	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	428871,845684
chr1:94697040-94698355	chr1	+	94697269	94698060	True	NM_004815,NM_001122674	chr1,chr1	-,+	ARHGAP29,ABCD3	5310,185872
chr21:37438638-37438872	chr21	+	37438637	37438914	True	NM_017438,NM_001007259,NM_001757	chr21,chr21,chr21	-,-,+	SETD4,SETD4,CBR1	-5821,-6026,3370
chrX:105970623-105970851	chrX	+	105970662	105970894	True	NM_194463,NM_001171706	chrX,chrX	+,-	RNF128,RIPPLY1	-819,175717
chr2:128567924-128568380	chr2	+	128567984	128568340	True	NM_032740,NM_018383,NM_001006622,NM_001006623	chr2,chr2,chr2,chr2	+,-,-,-	SFT2D3,WDR33,WDR33,WDR33	-109448,471,471,471
chr5:135666570-135667407	chr5	+	135666626	135667392	True	NM_001167576,NM_001001419	chr5,chr5	-,+	TRPC7,SMAD5	33822,-198141
chr4:124320117-124320385	chr4	+	124320137	124320219	True	NM_198041,NM_199327,NM_005841	chr4,chr4,chr4	-,+,+	NUDT6,SPRY1,SPRY1	-476014,-2232,463
chr17:58195906-58196270	chr17	+	58195991	58196265	True	NM_000717,NR_027408	chr17,chr17	+,-	CA4,LOC653653	31036,-15711
chr17:58195906-58196270	chr17	-	58105002	58105276	False	NM_000717,NR_002924	chr17,chr17	+,-	CA4,DHX40P1	122025,-8666
chr3:44514801-44515727	chr3	+	44515243	44515704	True	NM_018651,NM_181489	chr3,chr3	+,-	ZNF167,ZNF445	81008,3513
chr2:74692965-74694214	chr2	+	74693186	74694017	True	NM_001146158,NM_006302,NM_012477,NM_053050	chr2,chr2,chr2,chr2	-,-,+,-	MOGS,MOGS,WBP1,MRPL53	-649,-649,-7717,5975
chr7:42268167-42269269	chr7	+	42268224	42269286	True	NM_000168,NR_027119	chr7,chr7	-,+	GLI3,LOC285954	7382,-534731
chr9:32550870-32551092	chr9	+	32550964	32551098	True	NM_001195622,NM_005802,NR_033992,NR_033991	chr9,chr9,chr9,chr9	-,-,+,+	TOPORS,TOPORS,LOC100129250,LOC100129250	1578,1578,672,43
chr2:167310758-167311170	chr2	+	167310873	167311203	True	NM_001079810,NM_002976	chr2,chr2	+,-	XIRP2,SCN7A	433793,32325
chr1:166245252-166245958	chr1	+	166245473	166245983	True	NM_001017961,NR_002925	chr1,chr1	-,+	FAM78B,FMO9P	-109515,327169
chr12:21927926-21928354	chr12	+	21928082	21928279	True	NM_030572,NM_004982	chr12,chr12	+,-	C12orf39,KCNJ8	-248883,-335
chr1:162344344-162344755	chr1	+	162344460	162344756	True	NM_182581,NM_001085375,NM_001135240	chr1,chr1,chr1	-,+,+	C1orf111,C1orf226,C1orf226	1938,6763,3939
chr19:7007590-7008296	chr19	+	7007631	7008126	True	NR_024372,NM_001136507	chr19,chr19	-,+	FLJ25758,MBD3L5	-1205,22467
chr19:7007590-7008296	chr19	-	7010129	7010316	False	NR_024372,NM_001136507	chr19,chr19	-,+	FLJ25758,MBD3L5	-3703,20277
chr12:42867996-42869264	chr12	+	42868286	42869178	True	NM_016488,NM_001144881,NM_001144882,NM_001144883	chr12,chr12,chr12,chr12	+,-,-,-	PPHLN1,PRICKLE1,PRICKLE1,PRICKLE1	-148396,8288,8669,8669
chr17:42419811-42420319	chr17	+	42420100	42420209	True	NM_002087,NM_016016	chr17,chr17	+,-	GRN,SLC25A39	2281,-17883
chr7:143056058-143057266	chr7	+	143056126	143057234	True	NM_001010972,NM_001031690,NM_014690	chr7,chr7,chr7	+,-,-	ZYX,FAM131B,FAM131B	21125,2656,1989
chr1:110092944-110094638	chr1	+	110092984	110094456	True	NM_006496,NM_020703	chr1,chr1	+,-	GNAI3,AMIGO1	-1850,-40648
chr19:12169600-12170168	chr19	+	12169610	12170062	True	NM_001136501,NM_001080404	chr19,chr19	+,-	ZNF844,ZNF878	5483,-2483
chr17:48049400-48049649	chr17	+	48049399	48049695	True	NM_001934,NM_005220,NM_138281	chr17,chr17,chr17	+,-,+	DLX4,DLX3,DLX4	434,22943,-2888
chr5:157280639-157282074	chr5	+	157281064	157281853	True	NM_014666,NM_173491,NM_001195555,NM_001195556	chr5,chr5,chr5,chr5	-,+,-,-	CLINT1,LSM11,CLINT1,CLINT1	4380,-110370,4380,4380
chr6:56961073-56961397	chr6	+	56961299	56961399	True	NM_001031623,NM_183227,NM_015555	chr6,chr6,chr6	+,-,+	ZNF451,RAB23,ZNF451	-6529,124908,-6529
chr18:48343692-48344826	chr18	+	48343915	48344765	True	NM_001168335,NM_031939,NM_001127176,NM_001127175,NM_001127174	chr18,chr18,chr18,chr18,chr18	+,-,-,-,-	ME2,MRO,MRO,MRO,MRO	60666,1727,1727,1727,7047
chr14:20976133-20977366	chr14	+	20976281	20977122	True	NM_144568,NM_001012975	chr14,chr14	-,+	TMEM55B,RNASE10	-46644,1508
chr2:17935937-17936328	chr2	+	17935962	17936344	True	NM_024624,NM_001130009,NM_001142286,NM_182625	chr2,chr2,chr2,chr2	-,+,-,+	SMC6,GEN1,SMC6,GEN1	-866,-601,-866,-838
chr12:49365519-49365993	chr12	+	49365835	49365981	True	NM_003394,NM_005430	chr12,chr12	-,+	WNT10B,WNT1	-194,6254
chr5:149792328-149794108	chr5	+	149792357	149793666	True	NM_004355,NM_001025158,NM_001025159,NM_001195141	chr5,chr5,chr5,chr5	-,-,-,+	CD74,CD74,CD74,TCOF1	-34,-25,-34,-55206
chr15:25450188-25450523	chr15	+	25450187	25450565	True	NR_003315,NR_003314,NR_003313,NR_003312,NR_003311,NR_003310,NR_022010,NR_003495,NR_003308,NR_003309,NM_130838,NR_003307	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,+,-,+	SNORD115-23,SNORD115-22,SNORD115-21,SNORD115-20,SNORD115-19,SNORD115-18,PAR4,SNORD115-24,SNORD115-16,SNORD115-17,UBE3A,SNORD115-15	6377,4499,843,843,-734,-734,6273,8240,-5643,-734,200138,843
chrY:16636073-16636289	chrY	+	16636122	16636318	True	NR_028318,NR_028319,NM_004679,NM_014893	chrY,chrY,chrY,chrY	+,+,-,+	NLGN4Y,NLGN4Y,VCY,NLGN4Y	-1685,135,-537730,-547
chr14:24760146-24761463	chr14	+	24760335	24761341	True	NM_138452,NM_174913,NM_001136050	chr14,chr14,chr14	-,+,-	DHRS1,C14orf21,DHRS1	7375,7756,7748
chr14:61201727-61202182	chr14	+	61201731	61202173	True	NM_002431,NM_001177963,NM_017420	chr14,chr14,chr14	+,+,-	MNAT1,MNAT1,SIX4	-323,-323,-10879
chr1:7995114-7995480	chr1	+	7995164	7995510	True	NM_001561,NM_001123377	chr1,chr1	-,+	TNFRSF9,PARK7	7765,26203
chr17:19622258-19622503	chr17	+	19622364	19622532	True	NM_001099646,NM_000382,NM_152908	chr17,chr17,chr17	-,+,-	SLC47A2,ALDH3A2,SLC47A2	-2321,-70351,-2321
chrX:77034722-77035457	chrX	+	77034904	77035499	True	NM_138270,NM_001866,NM_000489	chrX,chrX,chrX	-,+,-	ATRX,COX7B,ATRX	6277,119461,6277
chr7:144533707-144535448	chr7	+	144533904	144535435	True	NM_005435,NM_022445,NM_001042482	chr7,chr7,chr7	+,-,-	ARHGEF5,TPK1,TPK1	-481466,-758,-758
chr1:144932528-144932759	chr1	+	144932617	144932815	True	NM_004892,NM_001002811	chr1,chr1	+,-	SEC22B,PDE4DIP	163591,-585
chr9:100688527-100690329	chr9	+	100688706	100689666	True	NM_016481,NM_006401	chr9,chr9	-,+	C9orf156,ANP32B	-3854,55822
chr6:54240219-54240613	chr6	+	54240234	54240648	True	NM_014464,NM_001003760	chr6,chr6	+,-	TINAG,KLHL31	-67097,-709728
chr7:66341455-66342331	chr7	+	66341673	66341756	True	NR_003934,NM_017994	chr7,chr7	-,+	LOC729156,C7orf42	-31860,44446
chr14:35871851-35872873	chr14	+	35871905	35872826	True	NM_002791,NM_020529	chr14,chr14	+,-	PSMA6,NFKBIA	-110382,1184
chr3:185271507-185272472	chr3	+	185272008	185272362	True	NM_021627,NM_139248	chr3,chr3	+,-	SENP2,LIPH	31668,-1639
chr19:11686741-11687593	chr19	+	11686866	11687640	True	NM_001611,NM_145295,NM_001111036,NM_001111035,NM_001111034	chr19,chr19,chr19,chr19,chr19	-,+,-,-,-	ACP5,ZNF627,ACP5,ACP5,ACP5	963,20594,2211,2211,2002
chr17:48208199-48209042	chr17	+	48208215	48209090	True	NM_174920,NM_000023	chr17,chr17	-,+	SAMD14,SGCA	-1048,34275
chrY:1350568-1350808	chrY	+	1350595	1350686	True	NM_022148,NM_172247,NM_001161530	chrY,chrY,chrY	-,+,+	CRLF2,CSF2RA,CSF2RA	-69065,884,884
chrY:1350568-1350808	chrX	+	1400595	1400686	False	NM_022148,NM_172247,NM_001161530	chrX,chrX,chrX	-,+,+	CRLF2,CSF2RA,CSF2RA	-69065,884,884
chr12:3184420-3185260	chr12	+	3184703	3185143	True	NM_202003,NM_006675,NM_001168320	chr12,chr12,chr12	-,+,+	FOXM1,TSPAN9,TSPAN9	-198400,1377,1377
chr1:52339726-52341145	chr1	+	52339865	52341088	True	NM_001101662,NM_148907,NM_002525	chr1,chr1,chr1	-,+,-	NRD1,OSBPL9,NRD1	3580,-144438,3580
chr4:72633478-72634341	chr4	+	72633819	72634149	True	NM_004885,NM_000583	chr4,chr4	+,-	NPFFR2,GC	263371,15980
chrY:3732000-3732842	chrY	+	3732003	3732814	True	NM_003140,NM_139214	chrY,chrY	-,+	SRY,TGIF2LY	-1076211,-284932
chr17:39684063-39684377	chr17	+	39684080	39684380	True	NM_002276,NM_005801,NM_002275	chr17,chr17,chr17	-,+,-	KRT19,EIF1,KRT15	311,160746,-8810
chr11:71905736-71906901	chr11	+	71905909	71906901	True	NM_016725,NM_000802,NM_005169,NM_016729,NM_016724	chr11,chr11,chr11,chr11,chr11	+,+,-,+,+	FOLR1,FOLR1,PHOX2A,FOLR1,FOLR1	-5362,-5005,48369,-2791,-5362
chr8:55044675-55044920	chr8	+	55044696	55044833	True	NM_014175,NM_006330	chr8,chr8	+,-	MRPL15,LYPLA1	2947,-30119
chr12:13004742-13005401	chr12	+	13004834	13005381	True	NM_018654,NR_003932	chr12,chr12	-,+	GPRC5D,RPL13AP20	97994,23029
chr17:80710820-80711491	chr17	+	80710863	80711209	True	NM_005993,NM_006822	chr17,chr17	+,-	TBCD,RAB40B	-974,-54265
chr12:125397949-125398471	chr12	+	125398258	125398522	True	NM_021009,NM_080626	chr12,chr12	-,+	UBC,BRI3BP	1117,79671
chr14:74225688-74226007	chr14	+	74225791	74225953	True	NM_194278,NM_001146154	chr14,chr14	-,+	C14orf43,PTGR2	1098,92580
chr17:76974749-76974972	chr17	+	76974789	76974863	True	NM_005567,NM_030968	chr17,chr17	-,+	LGALS3BP,C1QTNF1	1248,45387
chr7:71802251-71802531	chr7	+	71802325	71802575	True	NR_001588,NM_001017440	chr7,chr7	+,-	SBDSP1,CALN1	497376,-117
chr3:196367830-196369324	chr3	+	196367859	196369248	True	NM_032898,NM_198565	chr3,chr3	-,+	C3orf34,LRRC33	69926,-1261
chr3:102147698-102148938	chr3	+	102147897	102148943	True	NM_000986,NM_175056	chr3,chr3	-,+	RPL24,ZPLD1	-742334,4915
chr19:2330630-2330837	chr19	+	2330704	2330846	True	NM_152988,NM_001077238,NM_016199	chr19,chr19,chr19	+,+,-	SPPL2B,SPPL2B,LSM7	-2126,-2126,-2090
chr12:131324058-131325177	chr12	+	131324063	131325078	True	NM_194356,NM_001980,NM_006325	chr12,chr12,chr12	-,-,+	STX2,STX2,RAN	-252,-252,31538
chr6:134497685-134498073	chr6	+	134497696	134498064	True	NM_004865,NM_001143678,NM_005627,NM_001143677	chr6,chr6,chr6,chr6	+,-,-,-	TBPL1,SGK1,SGK1,SGK1	-223446,-626,-1662,996
chr3:49756045-49756276	chr3	+	49756104	49756312	True	NM_013334,NM_198722,NM_021971,NM_022064	chr3,chr3,chr3,chr3	-,-,-,+	GMPPB,AMIGO3,GMPPB,RNF123	5122,976,5122,-29165
chr1:171637954-171638999	chr1	+	171638154	171639002	True	NM_001007239,NM_000261	chr1,chr1	+,-	METTL13,MYOC	111758,-16381
chr3:134517530-134518530	chr3	+	134517610	134518330	True	NM_178554,NM_004441	chr3,chr3	-,+	KY,EPHB1	-147746,-3562
chr12:56222446-56222812	chr12	+	56222463	56222769	True	NR_036478,NR_036479,NR_036476,NR_036477,NM_032364	chr12,chr12,chr12,chr12,chr12	+,+,+,+,-	LOC440104,LOC440104,LOC440104,LOC440104,DNAJC14	622,622,622,622,701
chr19:1204935-1205405	chr19	+	1205011	1205325	True	NM_000455,NM_014963	chr19,chr19	+,-	STK11,SBNO2	472,-30729
chr15:62351970-62352288	chr15	+	62351970	62352140	True	NM_017684,NM_001018088,NM_018080,NM_020821,NM_207322	chr15,chr15,chr15,chr15,chr15	-,-,-,-,+	VPS13C,VPS13C,VPS13C,VPS13C,C2CD4A	574,574,574,574,7035
chr19:44616047-44617376	chr19	+	44616331	44617295	True	NM_013362,NR_033341	chr19,chr19	+,-	ZNF225,LOC100379224	252,91
chr5:128448560-128448890	chr5	+	128448638	128448903	True	NM_016048,NM_001999	chr5,chr5	+,-	ISOC1,FBN2	-18247,-574903
chr6:43424377-43424990	chr6	+	43424470	43425037	True	NM_023932,NM_206539,NM_001146016	chr6,chr6,chr6	-,-,+	DLK2,DLK2,TJAP1	-1184,-684,20223
chr6:88876941-88877189	chr6	+	88877028	88877148	True	NM_001160259,NM_001160258,NM_001160226,NM_030960,NM_016083	chr6,chr6,chr6,chr6,chr6	-,-,-,+,-	CNR1,CNR1,CNR1,SPACA1,CNR1	-1261,-1261,-1261,-119572,-1261
chr4:186580868-186582148	chr4	+	186580868	186582067	True	NM_001114357,NM_001145674,NM_001145675	chr4,chr4,chr4	+,-,-	C4orf47,SORBS2,SORBS2	-230381,-2745,-2745
chr19:55137178-55137658	chr19	+	55137504	55137671	True	NM_006669,NM_001081639,NM_001081638,NM_001081637,NM_145057	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	LILRB1,LILRB1,LILRB1,LILRB1,CDC42EP5	-8926,4236,4236,4296,-153082
chr19:48751528-48752174	chr19	+	48751562	48752073	True	NM_001184904,NM_001184901,NM_001184900,NM_001184903,NM_001184902,NM_014959,NR_033680,NR_033678,NR_033679,NM_153608	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,-,-,+	CARD8,CARD8,CARD8,CARD8,CARD8,CARD8,CARD8,CARD8,CARD8,ZNF114	7192,1093,-7242,1093,7192,1093,879,879,-7242,22580
chr12:27679622-27680334	chr12	+	27679796	27680174	True	NM_003622,NM_001146221,NM_001198916,NM_001198915,NM_177444	chr12,chr12,chr12,chr12,chr12	+,-,+,+,+	PPFIBP1,LOC100287284,PPFIBP1,PPFIBP1,PPFIBP1	-2809,244094,-2809,-2809,-2809
chr20:33415415-33415908	chr20	+	33415442	33415743	True	NR_002165,NR_028046,NM_014071	chr20,chr20,chr20	-,+,-	HMGB3P1,ACSS2,NCOA6	6573,47022,-2009
chr17:74076455-74077595	chr17	+	74076755	74077448	True	NM_003857,NM_180990,NM_014230	chr17,chr17,chr17	+,+,-	GALR2,ZACN,SRP68	-5914,-1543,-8148
chr21:33780753-33782068	chr21	+	33781113	33781878	True	NM_058187,NM_014825	chr21,chr21	+,-	C21orf63,URB1	2873,-15801
chr11:20619808-20620010	chr11	+	20619866	20620052	True	NM_001029865,NM_004211	chr11,chr11	-,+	DBX1,SLC6A5	-437996,893
chr3:133970818-133971234	chr3	+	133970829	133971230	True	NM_002958,NM_001042383,NM_001005861	chr3,chr3,chr3	-,+,-	RYK,CEP63,RYK	-1243,233344,-1243
chr11:5644203-5644688	chr11	+	5644234	5644489	True	NM_130390,NM_033034,NM_021616,NM_001003827	chr11,chr11,chr11,chr11	+,-,+,+	TRIM34,TRIM5,TRIM34,TRIM34	8995,61903,1717,-3117
chr2:91762960-91764689	chr2	+	91763360	91764717	True	NR_003503,NR_027238	chr2,chr2	+,-	GGT8P,LOC654342	198650,83309
chr3:130462571-130463521	chr3	+	130462743	130463563	True	NM_014602,NM_001199181	chr3,chr3	-,+	PIK3R4,ATP2C1	2189,105805
chr8:124287598-124287864	chr8	+	124287658	124287780	True	NR_037874,NR_037873,NM_001204180,NM_007222,NM_207006,NM_001017926	chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,+,-	ZHX1,ZHX1,ZHX1-C8ORF76,ZHX1,FAM83A,ZHX1	-931,61,-931,-931,-92957,-931
chr2:27360637-27361970	chr2	+	27360937	27361997	True	NM_175769,NM_178553,NM_013388	chr2,chr2,chr2	+,-,-	TCF23,C2orf53,PREB	9947,385,-3395
chr7:64755610-64756236	chr7	+	64755845	64756031	True	NM_001007253,NM_007139	chr7,chr7	-,+	ERV3,ZNF92	-288721,82736
chr1:171219061-171220817	chr1	+	171219109	171220661	True	NM_002021,NR_031627	chr1,chr1	+,-	FMO1,MIR1295	-1497,-148162
chr13:21140359-21140787	chr13	+	21140516	21140836	True	NM_175605,NM_006531,NM_015974	chr13,chr13,chr13	+,+,-	IFT88,IFT88,CRYL1	371,371,-40504
chr11:43331315-43331734	chr11	+	43331647	43331739	True	NR_024625,NR_033868,NM_006595,NM_001142930,NM_001142931	chr11,chr11,chr11,chr11,chr11	+,-,+,+,+	API5,LOC399881,API5,API5,API5	1765,-40728,1765,1765,1765
chr7:74073111-74073810	chr7	+	74073119	74073403	True	NM_173537,NM_001518,NM_033001,NM_033000,NM_001163636,NM_032999	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,+,+	GTF2IRD2,GTF2I,GTF2I,GTF2I,GTF2I,GTF2I	194488,-1140,-1140,-1140,-1140,-1140
chr11:76174641-76175972	chr11	+	76174709	76175998	True	NM_020193,NM_004705	chr11,chr11	+,-	C11orf30,PRKRIR	-18698,-82829
chr22:30664058-30664416	chr22	+	30664285	30664377	True	NM_020530,NM_001017437	chr22,chr22	-,+	OSM,CCDC157	-1456,88249
chr11:94279066-94280884	chr11	+	94279177	94280901	True	NM_005591,NM_002033	chr11,chr11	-,+	MRE11A,FUT4	-52137,-2211
chr3:69158967-69159447	chr3	+	69158986	69159266	True	NM_006407,NM_198271	chr3,chr3	+,-	ARL6IP5,LMOD3	-24954,12540
chr8:11195945-11196878	chr8	+	11196080	11196760	True	NM_054028,NR_001578,NM_053279	chr8,chr8,chr8	+,+,-	AMAC1L2,TDH,FAM167A	-7636,385,127566
chrX:133941273-133941592	chrX	+	133941402	133941640	True	NM_001170757,NM_001170781,NM_001170782,NM_001170783,NM_001170779,NM_138819,NM_001170784	chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,+,+	FAM122B,FAM122C,FAM122C,FAM122C,FAM122C,FAM122C,FAM122C	-10140,-230,-248,-230,-230,-230,-248
chr1:50869939-50870373	chr1	+	50870151	50870315	True	NM_021952,NM_032110	chr1,chr1	+,-	ELAVL4,DMRTA2	-295623,18880
chr22:19420147-19420397	chr22	+	19420225	19420398	True	NM_003776,NM_003325	chr22,chr22	+,-	MRPL40,HIRA	-240,-1006
chr7:98246586-98246833	chr7	+	98246596	98246872	True	NM_002523,NM_018842	chr7,chr7	+,-	NPTX2,BAIAP2L1	-50,-216169
chr11:72146329-72147486	chr11	+	72146706	72147183	True	NM_001567,NM_030813	chr11,chr11	+,-	INPPL1,CLPB	-210875,-1138
chr10:50887047-50887260	chr10	+	50887118	50887256	True	NM_182554,NM_001042427,NM_001143996	chr10,chr10,chr10	+,+,-	C10orf53,C10orf53,OGDHL	427,427,83219
chr6:121762391-121763630	chr6	+	121762553	121763489	True	NM_000165,NM_152730	chr6,chr6	+,-	GJA1,C6orf170	-5866,-106909
chr14:21755439-21756764	chr14	+	21755474	21756310	True	NM_020366,NM_031314	chr14,chr14	+,-	RPGRIP1,HNRNPC	57,-17836
chr5:159739788-159740171	chr5	+	159739877	159740157	True	NM_001445,NM_024565	chr5,chr5	+,-	FABP6,CCNJL	-83491,-304
chr17:26851653-26853465	chr17	+	26851743	26853339	True	NM_005148,NM_003593	chr17,chr17	-,+	UNC119,FOXN1	26357,-835
chr21:45579147-45579562	chr21	+	45579162	45579496	True	NM_198155,NM_015259	chr21,chr21	+,-	C21orf33,ICOSLG	-25719,81388
chr19:12621264-12622650	chr19	+	12621294	12622492	True	NM_152601,NM_153358	chr19,chr19	-,+	ZNF709,ZNF791	-25662,99239
chr1:16086058-16086414	chr1	+	16086104	16086431	True	NM_001024215,NM_001024216,NM_001089591,NM_017556	chr1,chr1,chr1,chr1	+,+,-,+	FBLIM1,FBLIM1,UQCRHL,FBLIM1	4562,5027,47815,-900
chr19:4911177-4911473	chr19	+	4911181	4911511	True	NM_001080523,NM_001048201,NM_013282	chr19,chr19,chr19	-,+,+	ARRDC5,UHRF1,UHRF1	-8302,-1722,-666
chr20:19998489-19998723	chr20	+	19998547	19998713	True	NM_181527,NM_181528,NM_016100,NM_016652	chr20,chr20,chr20,chr20	+,+,+,-	NAA20,NAA20,NAA20,CRNKL1	-55,-661,-661,38029
chr1:168104656-168104994	chr1	+	168104682	168105040	True	NM_153832,NM_001031800	chr1,chr1	-,+	GPR161,TIPRL	634,43130
chr6:124124905-124125225	chr6	+	124124992	124125220	True	NM_153355,NM_001040214,NM_006073	chr6,chr6,chr6	+,+,-	NKAIN2,NKAIN2,TRDN	26,26,-167050
chr17:8648571-8648791	chr17	+	8648608	8648678	True	NM_001158261,NM_004822,NM_144681	chr17,chr17,chr17	-,+,-	CCDC42,NTN1,CCDC42	-454,276180,-454
chr6:42017068-42017763	chr6	+	42017077	42017733	True	NM_138572,NM_001136126,NM_001136017	chr6,chr6,chr6	+,-,-	TAF8,CCND3,CCND3	517,-467,-467
chr11:88734616-88735499	chr11	+	88734706	88735514	True	NM_001143831,NM_000372	chr11,chr11	-,+	GRM5,TYR	45788,175525
chr3:9832973-9833995	chr3	+	9833286	9833960	True	NM_001024959,NM_133480,NM_001024960,NM_006354,NM_005718,NM_001198793,NM_001198780	chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,-,+,-,+,+,+	ARPC4,TADA3,ARPC4,TADA3,ARPC4,ARPC4-TTLL3,ARPC4	218,510,218,510,271,271,840
chr9:34917635-34918930	chr9	+	34917677	34918878	True	NR_024481,NM_015297	chr9,chr9	-,+	C9orf144,KIAA1045	-79094,39313
chr7:123579433-123579908	chr7	+	123579463	123579829	True	NM_001174046,NM_001136002	chr7,chr7	+,-	SPAM1,TMEM229A	-13605,93744
chr8:32574565-32575665	chr8	+	32574613	32575686	True	NM_032664,NM_001159996	chr8,chr8	-,+	FUT10,NRG1	755035,3664
chr22:21334000-21334395	chr22	+	21334114	21334378	True	NM_001008695,NM_006767	chr22,chr22	-,+	THAP7,LZTR1	22076,2179
chr19:31636444-31636662	chr19	+	31636464	31636708	True	NM_020856,NR_026894	chr19,chr19	-,+	TSHZ3,DKFZp566F0947	203532,4074
chr16:89680189-89680671	chr16	+	89680541	89680719	True	NM_001083314,NM_001128141,NM_004413	chr16,chr16,chr16	-,+,+	CHMP1A,DPEP1,DPEP1	43460,-876,6280
chr5:118695576-118696615	chr5	+	118695610	118696644	True	NM_173666,NM_014350	chr5,chr5	-,+	DTWD2,TNFAIP8	-371370,-4068
chr1:48303314-48303720	chr1	+	48303359	48303687	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	158925,384669
chr3:194356601-194358522	chr3	+	194357167	194358487	True	NM_001011655,NM_001166305,NM_153690,NM_138399,NM_001166306	chr3,chr3,chr3,chr3,chr3	-,-,+,-,-	TMEM44,TMEM44,FAM43A,TMEM44,TMEM44	-3017,-3017,48134,-3017,-3017
chr9:114536274-114537571	chr9	+	114536274	114537261	True	NM_173521,NM_001198664	chr9,chr9	-,+	C9orf84,GNG10	8579,-112474
chr5:169779155-169780007	chr5	+	169779172	169780012	True	NM_004137,NM_001034838	chr5,chr5	-,+	KCNMB1,KCNIP1	36676,868
chr1:167521306-167521659	chr1	+	167521320	167521644	True	NM_003851,NM_052862	chr1,chr1	-,+	CREG1,RCSD1	1462,77829
chr6:26157098-26157419	chr6	+	26157173	26157377	True	NM_138720,NM_003539,NM_005321,NM_021063	chr6,chr6,chr6,chr6	+,-,+,+	HIST1H2BD,HIST1H4D,HIST1H1E,HIST1H2BD	971,31977,-665,971
chr19:1522023-1522324	chr19	+	1522156	1522324	True	NR_026557,NM_213604	chr19,chr19	+,-	PLK5P,ADAMTSL5	1753,-8968
chr17:40730449-40731183	chr17	+	40730559	40730960	True	NM_016556,NM_198205,NM_013290	chr17,chr17,chr17	-,+,-	PSMC3IP,MLX,PSMC3IP	-812,-11532,-812
chr9:100392174-100392658	chr9	+	100392197	100392679	True	NM_139246,NM_002486	chr9,chr9	-,+	TSTD2,NCBP1	3333,3025
chr14:74057970-74058432	chr14	+	74058267	74058384	True	NM_152331,NM_203309	chr14,chr14	+,-	ACOT4,HEATR4	25,-32616
chr16:86583597-86584486	chr16	+	86583772	86584414	True	NM_001159380,NM_001159378,NM_001159379,NR_027490,NM_022764,NM_001159377,NR_027489,NR_026674	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	-,-,-,-,-,-,-,+	MTHFSD,MTHFSD,MTHFSD,MTHFSD,MTHFSD,MTHFSD,MTHFSD,FLJ30679	4445,4477,4477,4477,4477,4477,4477,4511
chr7:27142646-27143185	chr7	+	27142684	27143234	True	NM_005522,NM_153620,NM_006735,NR_002795	chr7,chr7,chr7,chr7	-,-,-,+	HOXA1,HOXA1,HOXA2,HOXA11-AS1	-7059,-7059,-290,81792
chr1:20496739-20496981	chr1	+	20496745	20497025	True	NM_001105572,NM_152376	chr1,chr1	-,+	PLA2G2C,UBXN10	4712,15552
chr11:45928430-45928656	chr11	+	45928459	45928625	True	NM_152312,NM_001080446	chr11,chr11	+,-	GYLTL1B,C11orf94	14570,258
chr20:9495724-9495950	chr20	+	9495781	9495983	True	NM_012261,NM_001199897,NM_020341	chr20,chr20,chr20	+,+,-	C20orf103,C20orf103,PAK7	-827,-827,323754
chr10:71079819-71080097	chr10	+	71079829	71080145	True	NM_033496,NM_001057,NM_000188	chr10,chr10,chr10	+,-,+	HK1,TACR2,HK1	-4270,96579,-1277
chr22:35847601-35848437	chr22	+	35847708	35848398	True	NM_005368,NM_006739	chr22,chr22	-,+	MB,MCM5	165036,-51643
chrX:17756821-17757507	chrX	+	17756876	17757436	True	NM_006746,NM_001037540,NR_033348,NM_001037535,NM_001037536	chrX,chrX,chrX,chrX,chrX	+,+,-,+,+	SCML1,SCML1,RAI2,SCML1,SCML1	-1343,-1343,121571,-1343,-1343
chr1:52615456-52616369	chr1	+	52615455	52616167	True	NM_015913,NM_007324,NM_007323,NM_004799	chr1,chr1,chr1,chr1	-,+,+,+	TXNDC12,ZFYVE9,ZFYVE9,ZFYVE9	-94408,-7462,-7462,-7462
chr15:42843158-42843693	chr15	+	42843444	42843546	True	NM_001130447,NM_153260,NM_018097	chr15,chr15,chr15	+,-,+	HAUS2,LRRC57,HAUS2	-2484,-2442,-2484
chr11:129765171-129765404	chr11	+	129765285	129765375	True	NM_138788,NM_001143835,NM_006165	chr11,chr11,chr11	+,-,-	TMEM45B,NFRKB,NFRKB	-79595,165,-2381
chr5:76777126-76778483	chr5	+	76777255	76778515	True	NM_003719,NM_018268	chr5,chr5	+,-	PDE8B,WDR41	-270607,9874
chr12:53818231-53819138	chr12	+	53818245	53819163	True	NM_001193511,NM_020547,NM_001164691,NM_001164690	chr12,chr12,chr12,chr12	-,+,+,+	MAP3K12,AMHR2,AMHR2,AMHR2	74331,-657,-657,-657
chrX:57366552-57367461	chrX	+	57366622	57367465	True	NM_019003,NM_174912	chrX,chrX	-,+	SPIN2A,FAAH2	-202564,-53563
chr14:21566959-21567644	chr14	+	21567141	21567615	True	NM_016423,NM_001101672,NM_001146683,NM_001102454	chr14,chr14,chr14,chr14	-,-,+,-	ZNF219,ZNF219,C14orf176,ZNF219	-333,16,-97,5298
chr2:48668012-48668329	chr2	+	48668115	48668377	True	NM_152994,NM_000233,NM_001193475,NM_001135629,NR_024188	chr2,chr2,chr2,chr2,chr2	+,-,+,+,+	KLRAQ1,LHCGR,KLRAQ1,KLRAQ1,KLRAQ1	-258,314553,-258,-258,-258
chr2:149897033-149897872	chr2	+	149897101	149897853	True	NM_015702,NM_177964	chr2,chr2	-,+	MMADHC,LYPD6B	546527,-2171
chr22:44191497-44193353	chr22	+	44191513	44193306	True	NM_025225,NM_022785	chr22,chr22	+,-	PNPLA3,EFCAB6	126312,14962
chr1:46268222-46268732	chr1	+	46268324	46268766	True	NM_005897,NM_015112	chr1,chr1	-,+	IPP,MAST2	-51839,518
chr1:155196922-155197122	chr1	+	155196921	155197037	True	NR_002188,NM_198883	chr1,chr1	-,+	GBAP1,MTX1	344,-18482
chr9:37421812-37422113	chr9	+	37421852	37422113	True	NM_012203,NM_014872	chr9,chr9	+,-	GRHPR,ZBTB5	593,43351
chr4:153601124-153601327	chr4	+	153601143	153601321	True	NM_152680,NM_001025593	chr4,chr4	-,+	TMEM154,ARFIP1	46,99790
chr4:331586-331904	chr4	+	331588	331768	True	NM_001137608,NM_003441	chr4,chr4	-,+	ZNF732,ZNF141	-41644,-43
chr1:63787316-63787594	chr1	+	63787383	63787611	True	NM_012183,NM_014288	chr1,chr1	+,-	FOXD3,ITGB3BP	1118,201274
chr1:145470621-145471423	chr1	+	145470627	145471401	True	NM_001039888,NM_032305,NM_153713	chr1,chr1,chr1	+,-,+	ANKRD34A,POLR3GL,LIX1L	-170,-240,5683
chr19:49496414-49496651	chr19	+	49496455	49496575	True	NM_001161587,NM_006666,NR_027763,NM_002103	chr19,chr19,chr19,chr19	-,+,-,-	GYS1,RUVBL2,GYS1,GYS1	85,580,85,85
chr7:119458019-119459973	chr7	+	119458182	119459634	True	NM_012281,NM_012338	chr7,chr7	+,-	KCND2,TSPAN12	454087,1038593
chr7:99472042-99473780	chr7	+	99472067	99473830	True	NM_001005276,NM_057096	chr7,chr7	-,+	OR2AE1,CYP3A43	889,-46494
chr9:33443848-33444319	chr9	+	33443853	33444263	True	NM_004925,NM_002504	chr9,chr9	-,+	AQP3,NFX1	3377,-153486
chrX:84186552-84186972	chrX	+	84186571	84186742	True	NR_024062,NM_001012980	chrX,chrX	+,-	UBE2DNL,SATL1	2414,177289
chr16:2257038-2257459	chr16	+	2257048	2257506	True	NM_001199174,NM_001199175,NM_001199173,NM_182563,NM_022372,NM_001042371	chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,-,+,-	MLST8,MLST8,MLST8,C16orf79,MLST8,PGP	-1367,-1921,-1921,3613,-1921,7366
chr1:161596218-161597917	chr1	+	161596459	161597541	True	NR_024151,NM_000570	chr1,chr1	+,-	HSPA7,FCGR3B	-20661,3668
chr1:161596218-161597917	chr1	+	161515013	161515063	False	NM_000569,NM_001127593,NM_001127592,NM_001127595,NM_001127596,NM_002155	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,+	FCGR3A,FCGR3A,FCGR3A,FCGR3A,FCGR3A,HSPA6	4805,5400,4805,5400,5400,-21028
chr8:30517195-30518323	chr8	+	30517300	30518091	True	NM_002095,NM_005671	chr8,chr8	-,+	GTF2E2,UBXN8	-1562,83598
chr9:98080170-98080751	chr9	+	98080250	98080636	True	NM_000136,NR_029496	chr9,chr9	-,+	FANCC,MIR24-1	-259,-231999
chr8:52795407-52796880	chr8	+	52795902	52796913	True	NM_052937,NM_005285	chr8,chr8	-,+	PCMTD1,NPBWR1	14873,1055554
chr2:241397135-241397484	chr2	+	241397172	241397328	True	NR_024014,NR_029702	chr2,chr2	-,+	PP14571,MIR149	-1055,-1805
chr5:102195817-102197756	chr5	+	102195816	102197362	True	NM_138821,NM_138822,NM_001177306,NR_033440,NM_017676,NM_138766,NM_000919	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,-,+,+	PAM,PAM,PAM,PAM,GIN1,PAM,PAM	4164,4164,4164,4164,258538,4164,4164
chr20:18549412-18550511	chr20	+	18549858	18550560	True	NM_006606,NR_015432	chr20,chr20	-,+	RBBP9,LOC388789	-71971,-1843
chr20:31755618-31756770	chr20	+	31755747	31756715	True	NM_080574,NM_080675	chr20,chr20	+,-	C20orf70,SUN5	162,-163508
chr19:17501640-17502042	chr19	+	17501692	17501972	True	NM_138401,NM_031310	chr19,chr19	+,-	FAM125A,PLVAP	28939,-13555
chr4:86875880-86877564	chr4	+	86876192	86877206	True	NM_031305,NM_138981	chr4,chr4	+,-	ARHGAP24,MAPK10	-24817,151662
chr6:111770115-111770586	chr6	+	111770244	111770602	True	NM_002912,NR_034111	chr6,chr6	-,+	REV3L,LOC643749	33862,34072
chr4:38833797-38834918	chr4	+	38834018	38834864	True	NM_006068,NM_138389	chr4,chr4	-,+	TLR6,FAM114A1	23624,34489
chrX:106879212-106880808	chrX	+	106879302	106880833	True	NM_002764,NM_001015881,NM_001204402	chrX,chrX,chrX	+,-,+	PRPS1,TSC22D3,PRPS1	-7700,78933,-7700
chrX:48164374-48165356	chrX	+	48164492	48165402	True	NM_021014,NM_005635	chrX,chrX	-,+	SSX3,SSX1	50790,-49746
chrX:48164374-48165356	chrX	+	52682732	52683622	False	NR_027250,NM_173358	chrX,chrX	+,-	SSX8,SSX7	-30798,378
chr4:130011004-130012327	chr4	+	130011536	130012306	True	NM_001099783,NM_144643,NM_173487	chr4,chr4,chr4	+,-,+	C4orf33,SCLT1,C4orf33	4975,2508,2522
chrX:24712264-24713752	chrX	+	24712441	24713337	True	NM_016937,NM_001163264	chrX,chrX	+,-	POLA1,PCYT1B	-428,-21462
chrY:27765029-27765245	chrY	+	27765181	27765262	True	NM_004680,NR_002179,NM_001003895,NM_001003894,NM_170723	chrY,chrY,chrY,chrY,chrY	+,-,+,+,+	CDY1,TTTY17C,CDY1B,CDY1B,CDY1	3001,-434261,3001,3001,3001
chrY:27765029-27765245	chrY	-	26197162	26197243	False	NM_004680,NM_001003895,NM_001003894,NR_001526,NM_170723	chrY,chrY,chrY,chrY,chrY	-,-,-,+,-	CDY1,CDY1B,CDY1B,TTTY17A,CDY1	-3001,-3001,-3001,434235,-3001
chrY:27765029-27765245	chrY	+	20134569	20134650	False	NM_004825,NM_001001722	chrY,chrY	+,+	CDY2A,CDY2B	3016,3017
chrY:27765029-27765245	chrY	-	19995116	19995197	False	NM_004825,NM_001001722	chrY,chrY	-,-	CDY2A,CDY2B	-3016,-3017
chr19:44954761-44956013	chr19	+	44954915	44955972	True	NM_001205280,NM_014518	chr19,chr19	+,-	LOC147710,ZNF229	160967,-2250
chr9:131645321-131645973	chr9	+	131645412	131645822	True	NM_001127245,NM_001127244,NM_019594,NM_001122672,NM_001122671,NM_004059	chr9,chr9,chr9,chr9,chr9,chr9	+,+,+,-,-,-	LRRC8A,LRRC8A,LRRC8A,CCBL1,CCBL1,CCBL1	-1072,-682,-1072,-1058,-1058,-1058
chr4:88585073-88586010	chr4	+	88585233	88585970	True	NM_004407,NM_004684	chr4,chr4	+,-	DMP1,SPARCL1	-13837,-134578
chr22:51039806-51040010	chr22	+	51039806	51039980	True	NM_016431,NM_012324,NM_005198	chr22,chr22,chr22	+,+,-	MAPK8IP2,MAPK8IP2,CHKB	1581,-726,-18378
chr11:62538482-62538745	chr11	+	62538522	62538760	True	NM_002696,NM_006473,NM_024784	chr11,chr11,chr11	+,+,-	POLR2G,TAF6L,ZBTB3	-9562,114,-16866
chrX:12920696-12921477	chrX	+	12920888	12921520	True	NM_138636,NR_030727	chrX,chrX	+,-	TLR8,LOC349408	3218,39949
chr19:52257735-52258301	chr19	+	52258060	52258346	True	NM_002029,NM_001462,NM_001193306,NM_001005738	chr19,chr19,chr19,chr19	-,+,-,+	FPR1,FPR2,FPR1,FPR2	-2910,8295,-2910,6106
chr1:160602917-160604422	chr1	+	160603030	160604223	True	NM_021181,NM_003037	chr1,chr1	+,-	SLAMF7,SLAMF1	104853,12909
chr17:36240190-36240508	chr17	+	36240246	36240453	True	NM_032258,NR_024178	chr17,chr17	+,-	TBC1D3F,LOC284100	43506,3965
chr17:36240190-36240508	chr17	+	45540542	45540611	False	NR_033934,NR_027416	chr17,chr17	-,+	MRPL45P2,LOC100272146	29430,-39755
chr6:35750366-35750628	chr6	+	35750372	35750676	True	NM_001010886,NM_207409,NM_001832	chr6,chr6,chr6	+,+,-	C6orf127,C6orf126,CLPS	-1592,-6031,14476
chr7:64601238-64601478	chr7	+	64601360	64601426	True	NR_027393,NM_001007253	chr7,chr7	+,-	INTS4L1,ERV3	176,-134236
chr2:31806779-31807095	chr2	+	31806786	31807129	True	NM_014600,NM_000348	chr2,chr2	+,-	EHD3,SRD5A2	-349957,-746
chr12:56391839-56392350	chr12	+	56391955	56392036	True	NM_006928,NM_000456,NM_001032386,NM_001032387	chr12,chr12,chr12,chr12	-,+,+,+	PMEL,SUOX,SUOX,SUOX	-31459,-968,-968,-968
chr15:25638306-25640170	chr15	+	25638414	25640187	True	NM_130838,NR_001295	chr15,chr15	-,+	UBE3A,SNORD109A	10517,-114975
chr18:3819031-3820241	chr18	+	3819680	3820269	True	NR_024101,NM_001003809	chr18,chr18	+,-	FLJ35776,DLGAP1	-225619,25078
chr1:21764473-21766294	chr1	+	21765072	21766261	True	NM_032264,NM_001113348	chr1,chr1	+,-	NBPF3,ECE1	369,-93038
chr14:105454271-105454568	chr14	+	105454282	105454578	True	NM_174891,NM_138420	chr14,chr14	+,-	C14orf79,AHNAK2	-1719,-9588
chrX:151145014-151146013	chrX	+	151145073	151145956	True	NM_004961,NM_001011550	chrX,chrX	-,+	GABRE,MAGEA4	-1922,-58364
chr4:113469430-113469990	chr4	+	113469429	113469911	True	NM_016648,NM_024019	chr4,chr4	+,-	LARP7,NEUROG2	88208,-32101
chr10:120518478-120518971	chr10	+	120518922	120518982	True	NM_199461,NM_153810	chr10,chr10	+,-	NANOS1,C10orf46	270245,-4164
chr6:3894200-3895664	chr6	+	3894719	3895525	True	NM_183373,NM_012135	chr6,chr6	-,+	C6orf145,FAM50B	-142473,-45141
chr13:30421958-30423656	chr13	+	30422037	30423672	True	NM_007106,NR_033889	chr13,chr13	-,+	UBL3,LOC440131	1198,86995
chr17:41738596-41740206	chr17	+	41738901	41740048	True	NM_001136483,NM_013999,NM_001040002,NM_004527	chr17,chr17,chr17,chr17	+,-,-,-	C17orf105,MEOX1,MEOX1,MEOX1	117754,30,78,30
chr21:35444327-35445259	chr21	+	35444333	35445151	True	NM_032476,NM_006933,NM_001697	chr21,chr21,chr21	+,+,-	MRPS6,SLC5A3,ATP5O	671,718,-156175
chr15:31620799-31621663	chr15	+	31620883	31621629	True	NM_015995,NM_002420	chr15,chr15	+,-	KLF13,TRPM1	-1851,-226959
chr4:89923510-89925133	chr4	+	89923510	89925146	True	NM_014883,NM_145715	chr4,chr4	-,+	FAM13A,TIGD2	53227,108821
chr18:10612730-10613900	chr18	+	10612873	10613716	True	NM_003826,NM_022068	chr18,chr18	+,-	NAPG,FAM38B	-87051,535109
chr18:10612730-10613900	chr18	-	12222412	12222775	False	NM_006796,NM_001279	chr18,chr18	-,+	AFG3L2,CIDEA	154550,31542
chr19:7072049-7073756	chr19	+	7072447	7073624	True	NM_001044388,NM_024341,NM_001164425,NM_001044387	chr19,chr19,chr19,chr19	+,+,-,+	ZNF557,ZNF557,MBD3L3,ZNF557	-3027,-3027,-13802,-3027
chr9:113437050-113437660	chr9	+	113437347	113437423	True	NM_153366,NM_005592,NM_001166280,NM_001166281	chr9,chr9,chr9,chr9	-,+,+,+	SVEP1,MUSK,MUSK,MUSK	-95187,-6357,-6357,-6357
chr4:17995121-17997063	chr4	+	17995212	17996954	True	NM_153686,NM_022346	chr4,chr4	-,+	LCORL,NCAPG	26585,-182738
chr10:5937704-5939653	chr10	+	5938018	5939610	True	NM_019046,NM_001009941,NM_032807,NM_001009943,NM_178150	chr10,chr10,chr10,chr10,chr10	-,-,+,-,+	ANKRD16,ANKRD16,FBXO18,ANKRD16,FBXO18	-6158,-6158,-1720,-6158,-5855
chr1:91184189-91184454	chr1	+	91184307	91184377	True	NM_020063,NM_182976	chr1,chr1	-,+	BARHL2,ZNF326	-1513,-723680
chr7:2593574-2593998	chr7	+	2593698	2593992	True	NM_001100390,NM_152558,NM_152743	chr7,chr7,chr7	+,+,-	IQCE,IQCE,BRAT1	4639,4639,1450
chr12:102837898-102838797	chr12	+	102838125	102838745	True	NM_001111284,NM_017915	chr12,chr12	-,+	IGF1,C12orf48	33734,-324229
chr11:46146046-46147523	chr11	+	46146467	46147384	True	NM_001101802,NM_052854,NM_016621	chr11,chr11,chr11	-,+,-	PHF21A,CREB3L1,PHF21A	-3482,151843,-3482
chr7:105602403-105602627	chr7	+	105602417	105602673	True	NM_152750,NM_152749	chr7,chr7	+,-	CDHR3,ATXN7L1	983,-85386
chr4:111447286-111448441	chr4	+	111447486	111448450	True	NM_000325,NM_001977	chr4,chr4	-,+	PITX2,ENPEP	95854,-50317
chr16:2023353-2023599	chr16	+	2023481	2023621	True	NR_003142,NM_174903,NM_144603,NM_002952,NM_172167,NM_006453,NM_172168,NR_003020	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,-,-,-,+,-,+	SNHG9,RNF151,NOXO1,RPS2,NOXO1,TBL3,NOXO1,SNORA78	-8535,-6657,7869,-8654,7613,-1468,7613,-8347
chr7:23524695-23525044	chr7	+	23524962	23525048	True	NM_006547,NR_026676	chr7,chr7	-,+	IGF2BP3,RPS2P32	-14967,4958
chr15:78440132-78441297	chr15	+	78440332	78440908	True	NM_006383,NM_005530	chr15,chr15	-,+	CIB2,IDH3A	-16454,810
chr10:14919201-14919981	chr10	+	14919226	14919905	True	NM_001029954,NR_034181,NM_024670,NM_001193426,NM_001193427,NM_001193424,NM_001193425	chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,+,+,+,+,+,+	CDNF,SUV39H2,SUV39H2,SUV39H2,SUV39H2,SUV39H2,SUV39H2	-39243,876,993,876,959,876,959
chr19:35599225-35600255	chr19	+	35599402	35599884	True	NM_001136012,NM_001136010,NM_001136011,NM_021910,NR_024562,NR_024561,NM_001136009,NM_001136008,NM_001136007,NM_005971	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,-,-,+,+,+,+	FXYD3,FXYD3,FXYD3,FXYD3,LOC100128675,LOC100128675,FXYD3,FXYD3,FXYD3,FXYD3	6847,6847,6847,6847,-2194,-2227,6847,6847,6847,6847
chr1:31226254-31226945	chr1	+	31226296	31226891	True	NM_006762,NR_034182	chr1,chr1	-,+	LAPTM5,LOC100129196	3843,-34728
chr20:4711796-4712879	chr20	+	4711804	4712918	True	NR_024267,NR_024268,NM_012409,NR_024269	chr20,chr20,chr20,chr20	-,-,+,-	PRNT,PRNT,PRND,PRNT	8446,8446,-9309,8446
chr19:46405921-46406171	chr19	+	46406049	46406211	True	NM_004497,NM_001012643	chr19,chr19	+,-	FOXA3,MYPOP	-38582,-187
chr17:48503813-48504358	chr17	+	48503958	48504384	True	NM_025149,NM_018509	chr17,chr17	+,-	ACSF2,LRRC59	-490,-29044
chr5:54828706-54829316	chr5	+	54828844	54829361	True	NR_001575,NM_001166533,NM_003711,NM_176895	chr5,chr5,chr5,chr5	-,+,-,-	RNF138P1,DDX4,PPAP2A,PPAP2A	1063,204483,1566,1566
chr8:58192821-58193035	chr8	+	58192846	58192990	True	NR_026772,NM_017813	chr8,chr8	+,-	C8orf71,IMPAD1	-795,-286419
chr20:5092991-5093605	chr20	+	5093025	5093450	True	NM_001009923,NM_182649,NM_001009925,NM_001009924,NR_028370,NM_014145	chr20,chr20,chr20,chr20,chr20,chr20	-,-,-,-,+,-	C20orf30,PCNA,C20orf30,C20orf30,PCNA-AS1,C20orf30	334,7248,334,334,6781,334
chr10:94429997-94431192	chr10	+	94430092	94431087	True	NM_002729,NM_004969	chr10,chr10	+,-	HHEX,IDE	18593,-96240
chr15:72409501-72409791	chr15	+	72409507	72409739	True	NM_145204,NM_006901,NM_001172109,NM_001166340,NM_001172111,NM_001172110	chr15,chr15,chr15,chr15,chr15,chr15	+,-,+,+,+,+	SENP8,MYO9A,SENP8,SENP8,SENP8,SENP8	891,733,-366,-2959,891,-312
chr8:74004106-74004750	chr8	+	74004144	74004634	True	NM_153225,NM_017489	chr8,chr8	-,+	C8orf84,TERF1	923,-83098
chr1:54359776-54360168	chr1	+	54359941	54360149	True	NM_000792,NM_213593,NR_036640,NM_018982,NR_036639,NM_001039716,NM_001039715	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,-,-,+,+	DIO1,DIO1,YIPF1,YIPF1,YIPF1,DIO1,DIO1	-131,-131,-4454,-4454,-4454,-131,-131
chrX:113289822-113290622	chrX	+	113289944	113290104	True	NM_000868,NM_000640	chrX,chrX	+,-	HTR2C,IL13RA2	528446,962153
chr7:1546098-1546993	chr7	+	1546401	1546801	True	NM_002360,NM_001080453	chr7,chr7	+,-	MAFK,INTS1	23566,-2383
chr16:2586305-2586752	chr16	+	2586424	2586724	True	NM_001048212,NR_036139,NM_031268,NM_002613	chr16,chr16,chr16,chr16	-,-,+,+	CEMP1,MIR3178,PDPK1,PDPK1	-5015,-4418,1245,1245
chr2:34286877-34288552	chr2	+	34286877	34288188	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-547988,-333593
chr13:28023100-28024231	chr13	+	28023226	28024061	True	NM_002097,NM_152912,NM_001166261,NM_001166262,NM_001166263	chr13,chr13,chr13,chr13,chr13	+,-,-,-,-	GTF3A,MTIF3,MTIF3,MTIF3,MTIF3	-24597,729,324,316,729
chr12:64033967-64034831	chr12	+	64034257	64034478	True	NM_014254,NM_173812	chr12,chr12	+,-	TMEM5,DPY19L2	139158,27936
chr3:71835922-71836678	chr3	+	71835982	71836698	True	NM_018971,NM_001126128,NM_021935	chr3,chr3,chr3	+,-,-	GPR27,PROK2,PROK2	-32834,-1625,-1625
chr3:42853558-42854337	chr3	+	42853693	42854121	True	NM_001296,NM_001099669,NM_001099668,NM_014056	chr3,chr3,chr3,chr3	+,-,-,-	CCBP2,HIGD1A,HIGD1A,HIGD1A	-2780,-7666,-7759,-7666
chr19:8009595-8009831	chr19	+	8009599	8009837	True	NM_006351,NR_030717	chr19,chr19	-,+	TIMM44,SNAPC2	-891,-23783
chr19:462064-462435	chr19	+	462087	462351	True	NM_012435,NM_130760	chr19,chr19	-,+	SHC2,MADCAM1	-1091,34138
chr16:85590513-85591157	chr16	+	85590551	85591114	True	NM_001134473,NM_016095	chr16,chr16	+,-	KIAA0182,GINS2	53914,131524
chr3:125490000-125491052	chr3	+	125490530	125490680	True	NR_024250,NR_031687	chr3,chr3	+,-	LOC100125556,MIR548I1	144763,18765
chr12:49958953-49959383	chr12	+	49958955	49959341	True	NM_006337,NM_012284,NM_001012300	chr12,chr12,chr12	-,+,-	MCRS1,KCNH3,MCRS1	2620,-26066,931
chr3:194394929-194395311	chr3	+	194394930	194395080	True	NM_018385,NM_153690	chr3,chr3	-,+	LSG1,FAM43A	-1724,11541
chr10:51576239-51576474	chr10	+	51576322	51576514	True	NM_005437,NM_001145262,NM_006327	chr10,chr10,chr10	+,+,-	NCOA4,NCOA4,TIMM23	-4012,-91,46872
chr17:36107009-36108270	chr17	+	36107060	36108303	True	NM_001165923,NM_032258,NM_000458	chr17,chr17,chr17	-,+,-	HNF1B,TBC1D3F,HNF1B	-1964,175656,-1964
chr6:33676411-33678193	chr6	+	33676635	33678187	True	NM_032340,NM_002224	chr6,chr6	-,+	C6orf125,ITPR3	1375,-87530
chr5:140862574-140864526	chr5	+	140862687	140864401	True	NM_002588,NM_018929,NM_018928,NM_001079812,NM_032406,NM_032407,NM_032402,NM_032403	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,-,+,+,+,+	PCDHGC3,PCDHGC5,PCDHGC4,DIAPH1,PCDHGC4,PCDHGC5,PCDHGC3,PCDHGC3	-7169,4406,339,134271,339,4406,-7169,-7169
chr4:52941962-52942850	chr4	+	52942008	52942892	True	NM_145263,NM_000232	chr4,chr4	+,-	SPATA18,SGCB	-24474,-37523
chr9:2013233-2013466	chr9	+	2013324	2013515	True	NM_139045,NR_015375,NM_003070	chr9,chr9,chr9	+,-,+	SMARCA2,FLJ35024,SMARCA2	1826,608915,1826
chr4:162954047-162955689	chr4	+	162954124	162955700	True	NM_006174,NM_001128427	chr4,chr4	+,-	NPY5R,FSTL5	1309390,129537
chr12:42540964-42541553	chr12	+	42541025	42541393	True	NM_173601,NM_001099650,NM_201438	chr12,chr12,chr12	-,-,+	GXYLT1,GXYLT1,PPHLN1	-2352,-2352,178553
chr21:16437788-16438164	chr21	+	16437982	16438162	True	NM_003489,NM_013396	chr21,chr21	-,+	NRIP1,USP25	-856,664333
chr1:226924012-226924309	chr1	+	226924195	226924279	True	NM_002221,NM_000447	chr1,chr1	-,+	ITPKB,PSEN2	2647,133993
chr1:145092358-145092618	chr1	+	145092403	145092571	True	NM_004892,NM_022359	chr1,chr1	+,-	SEC22B,PDE4DIP	3835,-16217
chr12:132688857-132689112	chr12	+	132688893	132689161	True	NM_024078,NM_021808	chr12,chr12	+,-	NOC4L,GALNT9	-59951,1462
chr15:41788667-41789517	chr15	+	41788891	41789431	True	NM_002220,NM_001135685	chr15,chr15	+,-	ITPKA,LTK	-2829,16704
chr3:48416464-48417458	chr3	+	48416706	48417039	True	NM_001159929,NM_207102,NM_001080525,NM_001159927	chr3,chr3,chr3,chr3	+,+,-,+	FBXW12,FBXW12,SPINK8,FBXW12	-3053,-3053,-46875,-3053
chrX:91033424-91034155	chrY	+	4867597	4868073	False	NM_032971,NR_001540	chrY,chrY	+,-	PCDH11Y,TTTY23	193,1243628
chrX:91033424-91034155	chrX	+	91033634	91034110	True	NM_032967,NM_004538	chrX,chrX	+,-	PCDH11X,NAP1L3	149,1894622
chr20:1538048-1539368	chr20	+	1538135	1539239	True	NM_014723,NM_178460	chr20,chr20	+,-	SNPH,SIRPD	-291227,-124
chr1:151346120-151346398	chr1	+	151346135	151346357	True	NM_002796,NM_003944	chr1,chr1	+,-	PSMB4,SELENBP1	25683,-971
chr6:170601245-170601680	chr6	+	170601260	170601705	True	NM_032448,NM_005618	chr6,chr6	+,-	FAM120B,DLL1	14138,-1563
chr15:42066988-42067441	chr15	+	42067050	42067345	True	NR_036195,NM_014994,NM_001128608	chr15,chr15,chr15	-,+,+	MIR4310,MAPKBP1,MAPKBP1	91454,-469,-469
chr3:49974922-49975545	chr3	+	49975109	49975405	True	NM_001167582,NM_005777,NM_032355,NM_001142501	chr3,chr3,chr3,chr3	+,+,-,-	RBM6,RBM6,MON1A,MON1A	2071,2071,-7664,-7664
chr3:48506430-48507111	chr3	+	48506437	48507045	True	NM_033629,NM_024661,NM_016381	chr3,chr3,chr3	+,-,+	TREX1,CCDC51,TREX1	183,-24908,183
chr1:28098035-28098886	chr1	+	28098570	28098926	True	NM_177424,NM_022873	chr1,chr1	+,-	STX12,IFI6	767,-99846
chr11:20692759-20693926	chr11	+	20692943	20693944	True	NM_201551,NM_006157,NM_001029865	chr11,chr11,chr11	+,+,-	NELL1,NELL1,DBX1	-1879,-1879,-511073
chr6:154638898-154639705	chr6	+	154638915	154639686	True	NM_001130699,NM_001145287	chr6,chr6	-,+	IPCEF1,OPRM1	11588,-231331
chr11:18433498-18433801	chr11	+	18433528	18433740	True	NM_017448,NM_181508,NM_002301	chr11,chr11,chr11	+,-,+	LDHC,HPS5,LDHC	112,-89807,112
chr2:128431927-128432193	chr2	+	128432072	128432136	True	NM_001161404,NM_017980,NM_001136037,NM_001161403,NM_032740	chr2,chr2,chr2,chr2,chr2	-,-,-,-,+	LIMS2,LIMS2,LIMS2,LIMS2,SFT2D3	7274,-9905,678,678,26460
chr9:34623065-34623471	chr9	+	34623277	34623469	True	NM_000155,NM_001017363,NM_024348,NM_007234	chr9,chr9,chr9,chr9	+,-,-,-	GALT,ARID3C,DCTN3,DCTN3	23165,4592,-2781,-2781
chr1:68698190-68698519	chr1	+	68698196	68698562	True	NM_024911,NM_001002292,NM_001193334,NM_001924	chr1,chr1,chr1,chr1	-,-,-,+	WLS,WLS,WLS,GADD45A	88,33,33,-547387
chr12:113840716-113841183	chr12	+	113840756	113840938	True	NM_138432,NM_006843	chr12,chr12	+,-	SDSL,SDS	19277,804
chr17:74866585-74866788	chr17	+	74866635	74866829	True	NM_144677,NM_198955,NM_001199172,NR_036608	chr17,chr17,chr17,chr17	+,+,+,-	MGAT5B,MGAT5B,MGAT5B,SRSF2	-1888,1899,-1888,-133142
chr10:102671432-102672379	chr10	+	102671733	102672325	True	NM_001136123,NR_024245,NM_018121,NM_176792	chr10,chr10,chr10,chr10	+,+,+,-	FAM178A,FAM178A,FAM178A,MRPL43	0,0,0,74997
chr6:99842355-99843180	chr6	+	99842354	99843018	True	NM_017421,NM_001195131	chr6,chr6	-,+	COQ3,LOC100130890	-272,125851
chr15:50646097-50646591	chr15	+	50646164	50646420	True	NM_002041,NR_024490,NM_181427,NM_016655,NM_005254,NR_026891,NM_016654	chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,+,-,-,-,-,-	GABPB1,LOC100129387,GABPB1,GABPB1,GABPB1,FLJ10038,GABPB1	1235,6,1235,1235,1235,706,1235
chr3:38835231-38835446	chr3	+	38835288	38835490	True	NM_020839,NM_006514	chr3,chr3	+,-	WDR48,SCN10A	258016,61
chr20:30871229-30872513	chr20	+	30871626	30872529	True	NM_002657,NM_004798	chr20,chr20	-,+	PLAGL2,KIF3B	-76080,-6223
chr7:38921280-38921768	chr7	+	38921314	38921804	True	NM_014396,NM_001166018	chr7,chr7	-,+	VPS41,POU6F2	27046,95804
chr19:41221008-41222282	chr19	+	41221041	41222280	True	NM_025194,NM_001142555,NM_024876	chr19,chr19,chr19	+,-,-	ITPKC,ADCK4,ADCK4	727,-30,561
chr15:78525418-78526756	chr15	+	78525428	78526724	True	NM_015162,NM_018602,NM_001199377	chr15,chr15,chr15	-,+,-	ACSBG1,DNAJA4,ACSBG1	375,29762,375
chrX:15808807-15809938	chrX	+	15808929	15809459	True	NR_002725,NM_005089	chrX,chrX	-,+	INE2,ZRSR2	-3217,-406
chr21:42691063-42691706	chr21	+	42691226	42691586	True	NM_058186,NM_206964,NM_182832	chr21,chr21,chr21	+,+,-	FAM3B,FAM3B,PLAC4	-2616,-2616,-134060
chr16:67931232-67931841	chr16	+	67931236	67931528	True	NM_006742,NM_001907	chr16,chr16	+,-	PSKH1,CTRL	-4112,34300
chr21:45774361-45775185	chr21	+	45774480	45774886	True	NM_003307,NM_004928	chr21,chr21	+,-	TRPM2,C21orf2	-1047,-15195
chr1:207115544-207117539	chr1	+	207115912	207117384	True	NM_002644,NM_006850	chr1,chr1	-,+	PIGR,IL24	2477,-45175
chr10:24498888-24499341	chr10	+	24498945	24499321	True	NM_019590,NM_001098501,NM_020824	chr10,chr10,chr10	+,+,-	KIAA1217,KIAA1217,ARHGAP21	-1276,-1276,513326
chr14:20295987-20297023	chr14	+	20295993	20296967	True	NM_001197287,NM_001004723	chr14,chr14	-,+	OR11H2,OR4N2	-113502,-437
chr10:103595919-103596572	chr10	+	103596323	103596387	True	NM_024747,NM_173195,NM_173191,NM_173192,NM_173193,NM_173194,NM_014591,NM_173197	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,-,-,-,-,-,-,-	HPS6,KCNIP2,KCNIP2,KCNIP2,KCNIP2,KCNIP2,KCNIP2,KCNIP2	228736,7340,7340,7340,7340,3274,7340,7340
chr5:25413938-25415862	chr5	+	25414200	25415901	True	NR_037896,NM_020227	chr5,chr5	-,+	LOC340107,PRDM9	-573508,-1906534
chr9:139925388-139925617	chr9	+	139925445	139925609	True	NM_004479,NM_001606,NM_212533,NM_207511	chr9,chr9,chr9,chr9	-,-,-,+	FUT7,ABCA2,ABCA2,C9orf139	1733,-2705,-2071,-3580
chr18:74845329-74845687	chr18	+	74845335	74845519	True	NM_001480,NM_001025101,NM_001025100	chr18,chr18,chr18	+,-,-	GALR1,MBP,MBP	116488,-561,-561
chr15:43624776-43625339	chr15	+	43625011	43625284	True	NM_001159280,NM_014793,NM_001012969	chr15,chr15,chr15	+,-,+	ADAL,LCMT2,ADAL	-2198,-2191,-2198
chr7:39773249-39774862	chr7	+	39773356	39774523	True	NM_138701,NR_026999	chr7,chr7	-,+	C7orf11,NCRNA00265	399778,-240
chr6:119470181-119470676	chr6	+	119470287	119470619	True	NM_001100411,NM_014034	chr6,chr6	-,+	FAM184A,ASF1A	-1,-255097
chr17:64187226-64187853	chr17	+	64187289	64187877	True	NM_145036,NM_002737,NM_001199165	chr17,chr17,chr17	-,+,-	CCDC46,PRKCA,CCDC46	160,111048,385
chr4:103453505-103454717	chr4	+	103454057	103454753	True	NM_003998,NM_001135146	chr4,chr4	+,-	NFKB1,SLC39A8	-31631,-187402
chr17:37354805-37355743	chr17	+	37354856	37355529	True	NM_199248,NM_000981,NM_000723,NM_199247	chr17,chr17,chr17,chr17	-,+,-,-	CACNB1,RPL19,CACNB1,CACNB1	-955,1006,-955,-955
chr1:184937309-184938929	chr1	+	184937516	184938716	True	NM_052966,NM_007212	chr1,chr1	-,+	FAM129A,RNF2	5016,75834
chr16:22218116-22218415	chr16	+	22218203	22218459	True	NM_001802,NM_013302	chr16,chr16	-,+	CDR2,EEF2K	167529,-662
chr11:75275238-75275872	chr11	+	75275308	75275862	True	NM_030792,NM_001235	chr11,chr11	-,+	GDPD5,SERPINH1	-38709,-2189
chr22:31316633-31317699	chr22	+	31317063	31317676	True	NM_014941,NR_026920	chr22,chr22	-,+	MORC2,C22orf27	46561,618
chr9:2718238-2718922	chr9	+	2718339	2718965	True	NM_133497,NR_015375	chr9,chr9	+,-	KCNV2,FLJ35024	-864,-95966
chr4:74734232-74735003	chr4	+	74734365	74735037	True	NM_001511,NM_002619	chr4,chr4	+,-	CXCL1,PF4	71,112728
chr15:28346195-28347238	chr15	+	28346226	28347094	True	NM_000275,NR_033351	chr15,chr15	-,+	OCA2,GOLGA8F	-1768,276689
chr2:222435356-222435665	chr2	+	222435369	222435437	True	NM_153038,NM_004438	chr2,chr2	+,-	CCDC140,EPHA4	727428,1623
chr11:66021856-66023152	chr11	+	66022426	66023102	True	NM_001134775,NM_001134774,NM_001134776,NM_022822,NM_020470	chr11,chr11,chr11,chr11,chr11	+,+,+,+,-	KLC2,KLC2,KLC2,KLC2,YIF1A	1662,2071,1988,2071,33586
chr11:130183477-130183947	chr11	+	130183517	130183793	True	NM_014155,NM_139055	chr11,chr11	-,+	ZBTB44,ADAMTS15	864,135075
chr19:42832016-42833913	chr19	+	42832305	42833698	True	NM_001145940,NM_001410	chr19,chr19	-,+	PAFAH1B3,MEGF8	-25353,-2595
chr7:86625702-86627036	chr7	+	86625819	86627083	True	NM_152748,NM_001142326	chr7,chr7	-,+	KIAA1324L,DMTF1	-30528,154593
chr12:80088244-80090172	chr12	+	80088262	80090199	True	NR_031700,NM_002583	chr12,chr12	+,-	MIR1252,PAWR	-275289,-3472
chr5:133758689-133760360	chr5	+	133758717	133759997	True	NM_003337,NM_080656	chr5,chr5	+,-	UBE2B,CDKN2AIPNL	-51910,-11119
chr2:190627507-190628087	chr2	+	190627591	190627999	True	NM_022353,NM_000534	chr2,chr2	-,+	OSGEPL1,PMS1	-11,20811
chr9:37753790-37754030	chr9	+	37753929	37753999	True	NM_016042,NM_144964	chr9,chr9	-,+	EXOSC3,RG9MTD3	31116,-178
chr18:56887926-56888167	chr18	+	56887938	56888120	True	NM_013435,NM_001012512,NM_001012513,NM_002091	chr18,chr18,chr18,chr18	-,+,+,+	RAX,GRP,GRP,GRP	52555,-589,-589,-589
chr15:76015524-76017450	chr15	+	76015827	76017192	True	NM_175881,NM_001897	chr15,chr15	+,-	ODF3L1,CSPG4	-24,-10638
chr2:179060141-179061391	chr2	+	179060221	179061414	True	NM_001201482,NM_001201480,NM_001201481,NM_001077197,NM_032523	chr2,chr2,chr2,chr2,chr2	+,+,+,-,+	OSBPL6,OSBPL6,OSBPL6,PDE11A,OSBPL6	-1064,-1064,-1064,-87155,-1064
chr6:167707418-167707754	chr6	+	167707447	167707751	True	NM_004610,NM_018974,NM_001143947	chr6,chr6,chr6	-,+,+	TCP10,UNC93A,UNC93A	90297,-2695,-2695
chr8:67589375-67590050	chr8	+	67589504	67590048	True	NM_019607,NM_001204173,NM_025054	chr8,chr8,chr8	+,+,-	C8orf44,C8orf44-SGK3,VCPIP1	-9768,-9768,-10052
chr1:109419826-109420745	chr1	+	109420083	109420756	True	NM_013296,NM_152763	chr1,chr1	+,-	GPSM2,AKNAD1	-531,-20367
chr22:45072193-45072682	chr22	+	45072371	45072695	True	NM_032287,NM_001198721,NM_001017528,NM_001017529,NM_001017530,NM_015366	chr22,chr22,chr22,chr22,chr22,chr22	-,+,+,+,+,+	LDOC1L,PRR5,PRR5,PRR5,PRR5,PRR5	-178366,-8,-7995,-7995,-8,-8
chr2:152634673-152636012	chr2	+	152635789	152636049	True	NM_004543,NM_001177665	chr2,chr2	-,+	NEB,RIF1	-44788,-369243
chr3:195270333-195271021	chr3	+	195270402	195270988	True	NR_003265,NM_006241	chr3,chr3	+,-	SDHAP2,PPP1R2	113921,-178
chr8:94930155-94931475	chr8	+	94930163	94931159	True	NM_001161779,NM_001161780,NM_001161781,NM_001161778,NM_203390,NM_018444	chr8,chr8,chr8,chr8,chr8,chr8	+,+,+,+,-,+	PDP1,PDP1,PDP1,PDP1,RBM12B,PDP1	-1039,-1052,-935,-222,-176939,-1131
chr2:242128962-242129261	chr2	+	242129003	242129191	True	NM_015148,NM_001001666,NM_001001891	chr2,chr2,chr2	-,+,+	PASK,ANO7,ANO7	-40125,-1130,-1130
chr12:28514546-28516536	chr12	+	28514721	28516543	True	NM_018318,NM_002820	chr12,chr12	+,-	CCDC91,PTHLH	-104647,-389805
chr4:2820942-2822673	chr4	+	2821228	2822366	True	NM_001145855,NM_001145856,NM_024309,NM_003023	chr4,chr4,chr4,chr4	+,+,-,+	SH3BP2,SH3BP2,TNIP2,SH3BP2	-7333,-1367,-63125,-738
chr7:100886778-100887197	chr7	+	100886914	100887214	True	NM_016068,NM_006349,NM_014343,NM_001185080	chr7,chr7,chr7,chr7	-,+,-,-	FIS1,ZNHIT1,CLDN15,CLDN15	1207,-25980,-5687,-4813
chr10:126478755-126479424	chr10	+	126478829	126479346	True	NM_032182,NM_212554	chr10,chr10	+,-	FAM175B,METTL10	11007,1146
chr15:59727588-59728249	chr15	+	59728005	59728267	True	NM_152450,NM_004998	chr15,chr15	+,-	FAM81A,MYO1E	2104,-62934
chr17:62205036-62205513	chr17	+	62205153	62205273	True	NR_004380,NM_001433	chr17,chr17	+,-	SNORD104,ERN1	18164,2279
chr7:1571241-1572212	chr7	+	1571259	1572247	True	NM_002360,NM_001097620	chr7,chr7	+,-	MAFK,TMEM184A	-942,23869
chr15:91428745-91429057	chr15	+	91428744	91429106	True	NM_002005,NM_001143783,NM_198527,NM_001143784,NM_001143785	chr15,chr15,chr15,chr15,chr15	+,+,-,+,+	FES,FES,HDDC3,FES,FES	-1107,-519,46718,-519,-1130
chr3:50330823-50331102	chr3	+	50330849	50331007	True	NM_001200016,NM_001200029,NM_003549,NM_001200030,NM_001200031,NM_001200032,NM_012191,NM_001200018,NM_153215,NM_006764	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,-,-,-,-,+,-	NAT6,HYAL3,HYAL3,HYAL3,HYAL3,HYAL3,NAT6,NAT6,C3orf45,IFRD2	5895,5336,5942,5942,5942,5942,5895,5363,-14382,-823
chr1:111391567-111391855	chr1	+	111391609	111391675	True	NM_001040033,NM_001006945	chr1,chr1	+,-	CD53,C1orf103	22145,114941
chr2:71062719-71064716	chr2	+	71063013	71064592	True	NM_015717,NM_012476	chr2,chr2	-,+	CD207,VAX2	-60,63127
chr12:111049376-111049926	chr12	+	111049444	111049639	True	NM_139283,NM_001082538,NM_001082537,NM_024549,NM_001173976,NM_001173975	chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,+,+,+	PPTC7,TCTN1,TCTN1,TCTN1,TCTN1,TCTN1	-28380,2192,2192,2192,2192,2272
chr3:63848411-63848762	chr3	+	63848480	63848790	True	NM_025075,NM_000333	chr3,chr3	-,+	THOC7,ATXN7	857,1442
chrX:113283329-113284254	chrX	+	113283954	113284235	True	NM_000868,NM_000640	chrX,chrX	+,-	HTR2C,IL13RA2	534315,968022
chr15:73976132-73976489	chr15	+	73976213	73976417	True	NM_025240,NM_001024736,NM_017455	chr15,chr15,chr15	+,+,-	CD276,CD276,NPTN	204,204,-50460
chr12:10180834-10182358	chr12	+	10180934	10182376	True	NM_016509,NM_207345	chr12,chr12	-,+	CLEC1B,CLEC9A	-29035,899
chr11:47373920-47374185	chr11	+	47373950	47374234	True	NM_000256,NM_001128225	chr11,chr11	-,+	MYBPC3,SLC39A13	69,55811
chr1:157960247-157961232	chr1	+	157960345	157961257	True	NM_005894,NM_018240,NR_033946	chr1,chr1,chr1	-,+,-	CD5L,KIRREL,LOC646268	-148711,1805,149223
chr20:636058-636373	chr20	+	636091	636421	True	NM_080725,NM_001042353	chr20,chr20	-,+	SRXN1,FAM110A	-2201,177934
chr2:131307464-131307798	chr2	+	131307674	131307814	True	NR_027313,NR_033930,NR_027314	chr2,chr2,chr2	-,-,-	LOC150527,LOC646743,LOC150527	-203,-186,-206
chr2:131307464-131307798	chr2	-	131328075	131328215	False	NR_027313,NR_033930,NR_027314	chr2,chr2,chr2	+,+,+	LOC150527,LOC646743,LOC150527	203,186,206
chr16:75499597-75500311	chr16	+	75499603	75499877	True	NM_145254,NM_007285	chr16,chr16	-,+	TMEM170A,GABARAPL2	-1019,100371
chr10:73535105-73535698	chr10	+	73535254	73535618	True	NM_022153,NM_001171933	chr10,chr10	-,+	C10orf54,CDH23	-1917,19909
chr1:220101905-220102359	chr1	+	220102053	220102355	True	NM_018060,NM_018713	chr1,chr1	+,-	IARS2,SLC30A10	165099,-60
chr15:68719781-68721594	chr15	+	68719898	68721426	True	NM_006091,NM_015322,NM_001004439	chr15,chr15,chr15	+,+,-	CORO2B,FEM1B,ITGA11	150146,-149809,3116
chrX:7150871-7151788	chrX	+	7150982	7151829	True	NM_000351,NM_001178135	chrX,chrX	+,-	STS,HDHD1	-13561,-84751
chr2:97175316-97177140	chr2	+	97175534	97176673	True	NM_212481,NR_026875	chr2,chr2	+,-	ARID5A,NEURL3	25790,-1688
chr6:33681151-33682790	chr6	+	33681214	33682622	True	NM_032340,NM_002224	chr6,chr6	-,+	C6orf125,ITPR3	-1710,-92117
chr7:65545633-65546809	chr7	+	65545707	65546739	True	NM_000181,NM_001024943,NM_001024944,NM_001024946,NM_000048	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	GUSB,ASL,ASL,ASL,ASL	-98406,-4927,-4927,-4927,-4985
chr19:36357323-36357616	chr19	+	36357356	36357564	True	NM_001024807,NM_004646,NM_032123,NM_199179,NM_005166,NM_199180	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+	APLP1,NPHS1,KIRREL2,KIRREL2,APLP1,KIRREL2	1836,-14461,-9597,-9597,1836,-9597
chr8:124055447-124056595	chr8	+	124055694	124056377	True	NM_001145088,NM_001134671,NM_024295	chr8,chr8,chr8	+,-,-	WDR67,DERL1,DERL1	28542,-1046,-1046
chr2:3523513-3524615	chr2	+	3523579	3524581	True	NM_001011,NM_018269	chr2,chr2	+,-	RPS7,ADI1	98271,-229
chr1:13710773-13711658	chr1	+	13710836	13711412	True	NM_001099850,NM_001099851	chr1,chr1	-,+	PRAMEF18,PRAMEF17	-12431,4675
chr1:13710773-13711658	chr1	-	13021015	13021073	False	NM_001100631,NM_001010889	chr1,chr1	+,-	PRAMEF22,PRAMEF6	14469,-13609
chr1:13710773-13711658	chr1	+	13346166	13346224	False	NM_001013692,NM_001013407	chr1,chr1	-,+	PRAMEF3,PRAMEF5	-14474,13594
chr1:13710773-13711658	chr1	+	13490005	13490581	False	NM_001045480,NM_001099850	chr1,chr1	+,-	PRAMEF16,PRAMEF18	4672,-12436
chr2:230136361-230136601	chr2	+	230136429	230136637	True	NM_174899,NM_001100818,NM_017933	chr2,chr2,chr2	+,-,-	FBXO36,PID1,PID1	650569,-372,-372
chr7:104654140-104654534	chr7	+	104654228	104654445	True	NM_182931,NR_024586,NM_018682	chr7,chr7,chr7	+,-,+	MLL5,LOC100216545,MLL5	191,193,191
chr21:35743380-35743845	chr21	+	35743414	35743656	True	NM_001127670,NM_058182,NM_172201	chr21,chr21,chr21	-,+,+	KCNE1,FAM165B,KCNE2	84471,4092,-7144
chr19:15489395-15489860	chr19	+	15489404	15489780	True	NM_005858,NR_031716	chr19,chr19	-,+	AKAP8,MIR1470	873,70578
chrX:47092370-47092605	chrX	+	47092393	47092615	True	NR_024235,NM_004651	chrX,chrX	-,+	NDUFB11,USP11	-87784,-130
chr12:122517877-122518543	chr12	+	122517886	122518462	True	NM_014938,NM_001014336	chr12,chr12	+,-	MLXIP,IL31	-1177,140334
chr16:86771855-86773415	chr16	+	86771931	86773434	True	NM_005250,NR_027490	chr16,chr16	+,-	FOXL1,MTHFSD	-159867,-183090
chr4:37686429-37687415	chr4	+	37686648	37687265	True	NM_001085400,NM_018302,NM_001085399	chr4,chr4,chr4	-,+,-	RELL1,C4orf19,RELL1	784,-100844,784
chr19:53033838-53034117	chr19	+	53033867	53034126	True	NM_001039886,NM_001105549	chr19,chr19	+,-	ZNF808,ZNF83	-3009,107568
chr19:39322361-39322571	chr19	+	39322410	39322598	True	NM_001398,NM_001042507	chr19,chr19	-,+	ECH1,LGALS7B	-11,-42611
chr7:107428089-107429386	chr7	+	107428110	107429173	True	NM_000111,NR_024199	chr7,chr7	-,+	SLC26A3,CBLL1	14565,-43889
chr8:8083511-8085141	chr8	+	8083893	8085028	True	NR_024361,NR_031689,NR_024363,NR_024362	chr8,chr8,chr8,chr8	+,-,+,+	FLJ10661,MIR548I3,FLJ10661,FLJ10661	1063,-137282,1063,1063
chr19:10122576-10123784	chr19	+	10122730	10123275	True	NM_015719,NM_015725	chr19,chr19	-,+	COL5A3,RDH8	-1583,649
chr7:75155331-75156166	chr7	+	75155375	75155847	True	NM_001099435,NR_028059	chr7,chr7	+,-	SPDYE5,PMS2P3	-31127,1664
chr17:56495281-56496457	chr17	+	56495337	56496125	True	NM_017763,NR_027647	chr17,chr17	-,+	RNF43,LPO	-406,-179613
chr11:111790270-111790773	chr11	+	111790315	111790618	True	NR_037651,NM_001885,NM_080659,NM_001541	chr11,chr11,chr11,chr11	+,-,+,+	HSPB2-C11ORF52,CRYAB,C11orf52,HSPB2	-6910,-7842,-769,-6910
chr11:131779697-131780327	chr11	+	131779711	131780245	True	NM_014758,NM_016522,NM_001144059,NM_001144058	chr11,chr11,chr11,chr11	-,+,+,+	SNX19,NTM,NTM,NTM	-993329,466,466,466
chr6:146920069-146920613	chr6	+	146920199	146920567	True	NM_024694,NR_003954	chr6,chr6	+,-	C6orf103,LOC729176	-114,204443
chr18:8711951-8712423	chr18	+	8711985	8712397	True	NM_015210,NR_024419	chr18,chr18	+,-	KIAA0802,LOC100192426	4971,-344953
chr20:62166891-62167616	chr20	+	62166934	62167607	True	NM_005975,NM_024299	chr20,chr20	-,+	PTK6,PPDPF	1150,-14852
chr1:66455097-66455342	chr1	+	66455282	66455358	True	NM_005478,NM_001037340	chr1,chr1	-,+	INSL5,PDE4B	811634,3031
chr6:21595614-21595816	chr6	+	21595613	21595701	True	NM_003107,NR_034143	chr6,chr6	+,-	SOX4,LOC729177	-1692,551771
chr19:48963005-48963659	chr19	+	48963328	48963492	True	NM_013348,NM_017457,NM_004228,NM_001080434,NM_170720	chr19,chr19,chr19,chr19,chr19	+,+,+,-,+	KCNJ14,CYTH2,CYTH2,LMTK3,KCNJ14	-4614,8972,8972,53004,1013
chr5:72743217-72743433	chr5	+	72743296	72743370	True	NM_004472,NM_001037637	chr5,chr5	-,+	FOXD1,BTF3	1032,50879
chr12:50504687-50505318	chr12	+	50504754	50505192	True	NM_032901,NM_147190,NM_005276	chr12,chr12,chr12	+,-,+	C12orf62,LASS5,GPD1	707,55955,-7004
chr7:105159986-105160363	chr7	+	105160058	105160408	True	NM_021930,NM_019042	chr7,chr7	+,-	RINT1,PUS7	12123,2327
chr11:66187810-66188109	chr11	+	66187895	66188043	True	NM_178864,NM_016050	chr11,chr11	+,-	NPAS4,MRPL11	431,18317
chr6:42161422-42162008	chr6	+	42161487	42162045	True	NM_000409,NM_002098	chr6,chr6	+,-	GUCA1A,GUCA1B	-38394,699
chr16:4817449-4818093	chr16	+	4817708	4817867	True	NM_021646,NR_029453	chr16,chr16	-,+	ZNF500,LOC440335	-542,20530
chr5:52096165-52096404	chr5	+	52096216	52096452	True	NM_004531,NM_181501	chr5,chr5	-,+	MOCS2,ITGA1	308923,-12131
chr3:120315559-120316990	chr3	+	120315612	120316634	True	NM_004547,NM_001168331,NM_000187	chr3,chr3,chr3	+,+,-	NDUFB4,NDUFB4,HGD	-535,-535,84840
chr14:93582794-93583229	chr14	+	93582954	93583246	True	NM_001142594,NR_002808,NM_014216,NM_001142593	chr14,chr14,chr14,chr14	-,+,-,-	ITPK1,ITPK1-AS1,ITPK1,ITPK1	-691,-49208,-691,-691
chrX:25211421-25212967	chrX	+	25211462	25213005	True	NM_139058,NR_003007	chrX,chrX	-,+	ARX,SCARNA23	-177397,-448956
chr17:74723579-74723903	chr17	+	74723615	74723795	True	NR_036608,NM_001080510,NR_030366,NM_001081461,NM_003016,NM_024311,NM_001195427,NM_015167	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,-,-,-,+,-,-	SRSF2,METTL23,MIR636,JMJD6,SRSF2,MFSD11,SRSF2,JMJD6	9748,-725,8885,-734,9748,9987,9748,-734
chr12:51322740-51324457	chr12	+	51323157	51323938	True	NM_014033,NM_001174130	chr12,chr12	+,-	METTL7A,SLC11A2	-4675,79165
chr6:43140289-43140489	chr6	+	43140303	43140513	True	NM_006443,NM_003131,NM_015089	chr6,chr6,chr6	-,+,+	C6orf108,SRF,CUL9	56748,-1434,9408
chr21:11170461-11171267	chr21	+	11170631	11171314	True	NM_001187,NR_037458	chr21,chr21	-,+	BAGE,MIR3687	-71694,-1344489
chr2:33363062-33364016	chr2	+	33363120	33363811	True	NM_001166264,NM_001166265,NM_001166266,NM_000627,NM_015475	chr2,chr2,chr2,chr2,chr2	+,+,+,+,-	LTBP1,LTBP1,LTBP1,LTBP1,FAM98A	-3507,-3507,-3507,-3507,460613
chr10:79398042-79398309	chr10	+	79398109	79398277	True	NR_024585,NM_001014797,NM_001161353,NM_001161352,NM_002247	chr10,chr10,chr10,chr10,chr10	+,-,-,-,-	LOC100128292,KCNMA1,KCNMA1,KCNMA1,KCNMA1	288292,-532,-532,-532,-532
chr3:130745989-130747564	chr3	+	130746234	130747186	True	NM_145910,NM_014065,NM_024800,NM_001146003	chr3,chr3,chr3,chr3	+,-,+,+	NEK11,ASTE1,NEK11,NEK11	-591,-588,-591,-591
chrX:135571702-135572780	chrX	+	135571737	135572681	True	NM_001163280,NM_001727,NM_014500,NM_001173516	chrX,chrX,chrX,chrX	+,+,+,-	HTATSF1,BRS3,HTATSF1,MAP7D3	6556,-1664,6989,-233096
chr2:143694242-143695559	chr2	+	143694468	143695609	True	NM_018557,NM_003937	chr2,chr2	-,+	LRP1B,KYNU	-805198,-59324
chr3:48648063-48648265	chr3	+	48648223	48648299	True	NM_033629,NM_003365	chr3,chr3	+,-	TREX1,UQCRC1	-141049,-1125
chr4:56502896-56503545	chr4	+	56502922	56503582	True	NR_003935,NM_006681	chr4,chr4	+,-	LOC644145,NMU	182654,-457
chr4:86753378-86753836	chr4	+	86753404	86753858	True	NM_001042669,NM_138981	chr4,chr4	+,-	ARHGAP24,MAPK10	-53604,275006
chr12:10316452-10317058	chr12	+	10316583	10317096	True	NM_153022,NM_001172632,NM_001172633,NM_002543	chr12,chr12,chr12,chr12	+,-,-,-	C12orf59,OLR1,OLR1,OLR1	14460,7745,7745,7745
chr18:43314559-43315260	chr18	+	43314663	43315253	True	NM_020964,NM_001146037	chr18,chr18	-,+	EPG5,SLC14A1	232102,-7796
chr14:60074864-60075376	chr14	+	60074890	60075366	True	NM_016475,NM_206852	chr14,chr14	+,-	JKAMP,RTN1	-123786,22204
chr6:4789019-4789256	chr6	+	4789088	4789294	True	NM_006638,NM_004824	chr6,chr6	-,+	RPP40,CDYL	215027,-12459
chr22:37608068-37608537	chr22	+	37608334	37608528	True	NM_013385,NM_001051	chr22,chr22	+,-	CYTH4,SSTR3	69966,19
chr1:157739857-157740476	chr1	+	157739913	157740433	True	NM_030764,NM_018240	chr1,chr1	-,+	FCRL2,KIRREL	6539,222629
chr2:201686759-201687357	chr3	-	116364228	116364469	False	NR_015391,NM_002338	chr3,chr3	+,-	NCRNA00295,LSAMP	64165,-199843
chr2:201686759-201687357	chr2	+	201686781	201687416	True	NM_001162407,NM_014670	chr2,chr2	-,+	CLK1,BZW1	41930,-10191
chr5:16509957-16511427	chr5	+	16510359	16511285	True	NM_019000,NM_006317	chr5,chr5	-,+	FAM134B,BASP1	-1328,706464
chr1:16068136-16068581	chr1	+	16068139	16068343	True	NM_001089591,NM_001013641,NM_207348	chr1,chr1,chr1	-,+,+	UQCRHL,TMEM82,SLC25A34	65901,573,-5381
chr14:105288452-105288756	chr14	+	105288480	105288542	True	NR_024396,NM_001014432	chr14,chr14	+,-	MGC23270,AKT1	-993,-26400
chr5:65220952-65221185	chr5	+	65221024	65221194	True	NR_028474,NM_001006600,NM_018695	chr5,chr5,chr5	-,+,+	LOC100303749,ERBB2IP,ERBB2IP	20257,1189,1189
chr9:95096050-95097188	chr9	+	95096103	95096826	True	NR_024020,NM_001012267,NM_017948	chr9,chr9,chr9	-,+,-	NOL8,CENPP,NOL8	-8227,-8420,-8227
chr7:119915061-119915570	chr7	+	119915064	119915596	True	NM_012281,NM_012338	chr7,chr7	+,-	KCND2,TSPAN12	-1393,582631
chr17:47287490-47287929	chr17	+	47287557	47287973	True	NM_016428,NM_001198756,NM_001198755,NM_001198754,NM_001135186,NM_031498	chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,-,+,-	ABI3,GNGT2,GNGT2,GNGT2,ABI3,GNGT2	-19,-795,-795,13,-19,-814
chr7:63955036-63955690	chr7	+	63955142	63955663	True	NM_178558,NR_029404	chr7,chr7	-,+	ZNF680,LOC649395	67892,-61137
chr4:21951261-21952854	chr4	+	21951278	21952814	True	NM_001128432,NM_147182	chr4,chr4	+,-	GBA3,KCNIP4	741733,-904
chr1:92683040-92683401	chr1	+	92683366	92683450	True	NM_053274,NM_001012425	chr1,chr1	-,+	GLMN,C1orf146	81166,122
chr19:54608137-54608734	chr19	+	54608408	54608577	True	NM_133169,NM_130771,NM_206818,NM_004542,NM_133168	chr19,chr19,chr19,chr19,chr19	-,-,-,+,-	OSCAR,OSCAR,OSCAR,NDUFA3,OSCAR	-4260,-4260,-4260,-2305,-4260
chr9:19740061-19741268	chr9	+	19740079	19741283	True	NM_001193288,NM_001010887	chr9,chr9	-,+	SLC24A2,ACER2	47358,-331216
chr3:170074033-170074317	chr3	+	170074057	170074355	True	NM_001145098,NM_001145097,NM_024947,NM_005414	chr3,chr3,chr3,chr3	+,+,-,+	SKIL,SKIL,PHC3,SKIL	1117,3055,-174520,1117
chr5:179721566-179722042	chr5	+	179721655	179722077	True	NM_001135044,NM_139068,NM_139069,NM_015455,NM_139070,NM_002752	chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,+,-,-	MAPK9,MAPK9,MAPK9,CNOT6,MAPK9,MAPK9	-2584,-2584,-2584,199339,-2584,-2584
chr3:50120666-50121572	chr3	+	50120667	50120998	True	NR_036627,NM_032355,NM_005778	chr3,chr3,chr3	+,-,+	RBM5,MON1A,RBM5	5353,-153222,5353
chr17:30594497-30595179	chr17	+	30594562	30595217	True	NM_022344,NM_138328	chr17,chr17	-,+	C17orf75,RHBDL3	74023,-1425
chr2:183603034-183603358	chr2	+	183603043	183603248	True	NM_018981,NM_001463	chr2,chr2	+,-	DNAJC10,FRZB	-22095,128307
chr1:26738448-26738979	chr1	+	26738456	26739012	True	NM_173574,NM_024674	chr1,chr1	-,+	ZNF683,LIN28A	-39190,-1238
chr14:103781162-103781471	chr14	+	103781166	103781232	True	NR_033938,NM_001969	chr14,chr14	-,+	LOC100131366,EIF5	-125801,19260
chr17:61816834-61817225	chr17	+	61816834	61817260	True	NM_001003788,NM_153335,NM_007372,NM_001165969,NM_001165970,NM_001003787,NM_001003786	chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,-,-,-,-	STRADA,STRADA,DDX42,STRADA,STRADA,STRADA,STRADA	2120,2120,34306,2120,2120,2120,2120
chr20:60812018-60812491	chr20	+	60812137	60812469	True	NM_007232,NM_014835,NM_144498	chr20,chr20,chr20	-,+,+	HRH3,OSBPL2,OSBPL2	-16814,1110,1110
chr9:79075063-79075384	chr9	+	79075089	79075357	True	NM_018339,NM_001490,NM_001097633	chr9,chr9,chr9	-,+,+	RFK,GCNT1,GCNT1	-65645,-1072,-1072
chr1:26187945-26188244	chr1	+	26187964	26188214	True	NM_001099626,NM_024037,NM_178422	chr1,chr1,chr1	+,-,-	FAM54B,C1orf135,PAQR7	-40697,-2116,9580
chr1:243997220-243997945	chr1	+	243997246	243997885	True	NR_033883,NM_181690,NM_005465	chr1,chr1,chr1	+,-,-	LOC339529,AKT3,AKT3	82818,8729,8729
chr6:139603433-139604300	chr6	+	139603754	139604344	True	NM_153235,NM_016217	chr6,chr6	-,+	TXLNB,HECA	8914,-147556
chr10:96301949-96302651	chr10	+	96301988	96302500	True	NM_022451,NM_018063	chr10,chr10	-,+	NOC3L,HELLS	-179305,3073
chr19:1171688-1172113	chr19	+	1171822	1172154	True	NM_000455,NM_014963	chr19,chr19	+,-	STK11,SBNO2	33643,2178
chr5:171708944-171709959	chr5	+	171708983	171709836	True	NM_001171183,NM_152277	chr5,chr5	+,-	EFCAB9,UBTD2	-87866,1014
chr13:41364283-41365584	chr13	+	41364436	41365439	True	NM_005830,NM_014252	chr13,chr13	-,+	MRPS31,SLC25A15	-19089,-940
chr2:73142142-73142643	chr2	+	73142161	73142659	True	NM_015189,NM_004097	chr2,chr2	-,+	EXOC6B,EMX1	-88984,1944
chrX:79278101-79279640	chrX	+	79278246	79279667	True	NM_001109878,NM_001109879,NM_004867,NM_016954	chrX,chrX,chrX,chrX	+,+,-,+	TBX22,TBX22,ITM2A,TBX22	-8042,-8042,-655197,-555
chr3:196260596-196261544	chr3	+	196261113	196261285	True	NM_001105573,NM_001077657	chr3,chr3	+,-	FBXO45,C3orf43	34439,-18876
chr1:3691765-3692125	chr1	+	3691825	3692117	True	NM_020710,NM_001163724	chr1,chr1	-,+	LRRC47,LOC388588	21001,-2524
chr20:43031303-43031909	chr20	+	43031442	43031954	True	NM_178850,NR_037419,NM_000457,NM_001080472,NM_178849	chr20,chr20,chr20,chr20,chr20	+,+,+,-,+	HNF4A,MIR3646,HNF4A,FITM2,HNF4A	-1569,4805,-1569,-91553,-1569
chr12:130523614-130524061	chr12	+	130523617	130523933	True	NR_024457,NM_007197	chr12,chr12	-,+	LOC100190940,FZD10	3004,123070
chr6:107076197-107077323	chr6	+	107076617	107077306	True	NM_032730,NM_018292	chr6,chr6	-,+	RTN4IP1,QRSL1	117,134
chr2:79367729-79368391	chr2	+	79367866	79368326	True	NR_002714,NM_002909	chr2,chr2	-,+	REG1P,REG1A	-2313,-20343
chr9:114245871-114246159	chr9	+	114246014	114246198	True	NM_001080398,NM_133464	chr9,chr9	-,+	KIAA0368,ZNF483	877,41248
chr15:90435673-90435986	chr15	+	90435755	90435886	True	NR_023361,NM_005829,NM_198526,NR_037582	chr15,chr15,chr15,chr15	-,-,+,-	AP3S2,AP3S2,ZNF710,AP3S2	1795,1795,108865,1795
chr11:63685888-63686423	chr11	+	63686053	63686373	True	NM_024771,NM_173587	chr11,chr11	+,-	NAA40,RCOR2	20068,-1737
chr13:100624325-100624963	chr13	+	100624500	100624963	True	NM_033132,NM_007129	chr13,chr13	-,+	ZIC5,ZIC2	-322,9062
chr3:128206293-128206529	chr3	+	128206397	128206469	True	NM_001145662,NM_001145661,NR_026954,NM_032638	chr3,chr3,chr3,chr3	-,-,+,-	GATA2,GATA2,LOC90246,GATA2	345,954,20208,5611
chrX:89173690-89175571	chrY	+	3443896	3445488	False	NM_003140,NM_139214	chrY,chrY	-,+	SRY,TGIF2LY	-788104,1637
chrX:89173690-89175571	chrX	+	89173710	89175303	True	NM_138960,NM_004538	chrX,chrX	+,-	TGIF2LX,NAP1L3	1636,3753436
chr1:182991564-182991803	chr1	+	182991567	182991771	True	NM_030933,NM_002293	chr1,chr1	-,+	SHCBP1L,LAMC1	-69014,823
chr22:19743417-19743992	chr22	+	19743501	19744024	True	NM_005992,NM_024627,NM_080647,NM_080646	chr22,chr22,chr22,chr22	+,-,+,+	TBX1,C22orf29,TBX1,TBX1	201,98397,201,201
chr6:41073258-41074717	chr6	+	41073337	41074371	True	NM_145063,NR_026938	chr6,chr6	-,+	C6orf130,LOC221442	-33149,-4616
chr19:10812896-10813267	chr19	+	10812895	10813166	True	NM_031209,NR_024333	chr19,chr19	+,-	QTRT1,LOC147727	-834,-48347
chr6:14823911-14824895	chr6	+	14823958	14824854	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	421672,838485
chr4:619757-620040	chr4	+	619826	620034	True	NM_000283,NM_007100,NM_001145291	chr4,chr4,chr4	+,-,+	PDE6B,ATP5I,PDE6B	-514,48143,-514
chr10:52499964-52500185	chr10	+	52499982	52500224	True	NM_147156,NM_001079516	chr10,chr10	-,+	SGMS1,ASAH2B	-116245,-325
chr6:150287151-150288242	chr6	+	150287331	150288171	True	NR_024045,NM_025218	chr6,chr6	-,+	RAET1K,ULBP1	38159,-2239
chr6:150287151-150288242	chr6	-	150324495	150324545	False	NR_024045,NM_025218	chr6,chr6	-,+	RAET1K,ULBP1	1785,-39403
chr8:120083403-120085001	chr8	+	120083740	120084843	True	NM_002546,NM_006438	chr8,chr8	-,+	TNFRSF11B,COLEC10	-119357,-4367
chr11:118230695-118232028	chr11	+	118230791	118232078	True	NM_004788,NM_001040651,NM_001204077	chr11,chr11,chr11	+,-,+	UBE4A,CD3D,UBE4A	-557,-17332,-557
chr3:122745430-122745675	chr3	+	122745526	122745644	True	NM_006810,NM_001031702	chr3,chr3	+,-	PDIA5,SEMA5B	40211,982
chr5:43038769-43039667	chr5	+	43038963	43039657	True	NM_001014279,NR_015447	chr5,chr5	-,+	C5orf39,LOC153684	840,2578
chr16:67536172-67536898	chr16	+	67536182	67536332	True	NM_001138,NM_024519	chr16,chr16	-,+	AGRP,FAM65A	-18466,26384
chr5:93395248-93396797	chr5	+	93395390	93396557	True	NM_001163417,NM_005654	chr5,chr5	-,+	FAM172A,NR2F1	50903,-476407
chr22:38966703-38968630	chr22	+	38966841	38968392	True	NM_001002880,NM_007068	chr22,chr22	+,-	CBY1,DMC1	84265,-652
chr22:39926990-39927722	chr22	+	39926995	39927720	True	NM_182810,NM_194326	chr22,chr22	+,-	ATF4,RPS19BP1	-10477,1191
chr10:52831846-52833683	chr10	+	52831997	52833473	True	NM_006258,NM_138933	chr10,chr10	+,-	PRKG1,A1CF	760,-186562
chr3:184280942-184281936	chr3	+	184281065	184281473	True	NM_022149,NM_004443	chr3,chr3	-,+	MAGEF1,EPHB3	148413,-1530
chr1:206148321-206150102	chr1	+	206148496	206149305	True	NM_001123168,NM_001007544	chr1,chr1	+,-	FAM72A,C1orf186	-9647,139399
chr1:206148321-206150102	chr1	+	120849036	120849845	False	NM_001004340,NM_001100910	chr1,chr1	-,+	FCGR1B,FAM72B	86156,-10093
chr1:206148321-206150102	chr1	-	143902288	143903097	False	NM_207418,NR_034178	chr1,chr1	-,+	FAM72D,SRGAP2P2	10107,12650
chr1:206148321-206150102	chr1	-	149455700	149456343	False	NR_027484,NM_001024599	chr1,chr1	+,-	FCGR1C,HIST2H2BF	-86464,-56471
chr2:107133040-107133880	chr2	+	107133049	107133919	True	NM_001144013,NR_003506	chr2,chr2	-,+	RGPD3,PLGLA	-48248,-130331
chr19:42580604-42580807	chr19	+	42580751	42580855	True	NM_022752,NM_002088	chr19,chr19	+,-	ZNF574,GRIK5	-512,-10794
chr21:44780120-44780353	chr21	+	44780188	44780340	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	89563,66712
chr19:1940674-1940981	chr19	+	1940757	1940837	True	NR_033400,NM_001319	chr19,chr19	-,+	C19orf34,CSNK1G2	13761,323
chr15:65426013-65426230	chr15	+	65426098	65426278	True	NM_005707,NM_001101362	chr15,chr15	-,+	PDCD7,KBTBD13	10,-56995
chr10:94608178-94608388	chr10	+	94608263	94608377	True	NM_004969,NM_019053	chr10,chr10	-,+	IDE,EXOC6	-274411,-89
chr18:14747084-14747319	chr18	+	14747083	14747147	True	NM_001145029,NM_001137671	chr18,chr18	+,-	ANKRD30B,POTEC	1091,-203484
chr6:124134466-124134726	chr6	+	124134472	124134579	True	NM_153355,NM_001040214,NM_006073	chr6,chr6,chr6	+,+,-	NKAIN2,NKAIN2,TRDN	-9455,-9455,-176530
chr2:189644752-189645949	chr2	+	189644905	189645995	True	NM_052952,NM_000090	chr2,chr2	-,+	DIRC1,COL3A1	8886,193103
chr18:67872968-67873236	chr18	+	67872972	67873246	True	NM_173630,NM_004232	chr18,chr18	-,+	RTTN,SOCS6	-10,82890
chr19:12778045-12779555	chr19	+	12778082	12779386	True	NM_001099737,NM_001173498,NM_032332,NM_000528,NM_016145,NR_029375	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,-,-,+	WDR83,MAN2B1,WDR83,MAN2B1,C19orf56,WDR83	-515,-491,1130,-491,1129,-515
chr10:103877739-103878952	chr10	+	103878004	103878898	True	NM_001113407,NM_015062,NM_003893	chr10,chr10,chr10	-,+,-	LDB1,PPRC1,LDB1	1362,13888,-3281
chr15:35837235-35837985	chr15	+	35837234	35837962	True	NM_080650,NM_001141972,NR_003144	chr15,chr15,chr15	-,-,+	ATPBD4,ATPBD4,LOC723972	492,492,-307766
chr14:60627460-60628543	chr14	+	60627596	60628450	True	NM_022495,NM_016029	chr14,chr14	+,-	C14orf135,DHRS7	-69018,3811
chr2:108858071-108859807	chr2	+	108858433	108859606	True	NM_001008743,NR_024439	chr2,chr2	+,-	SULT1C3,LOC729121	4044,-415850
chr8:7353683-7355508	chr8	+	7353685	7355273	True	NM_001040703,NM_001040704,NM_001040705,NM_001037668,NM_152250,NM_152251	chr8,chr8,chr8,chr8,chr8,chr8	+,-,+,+,+,-	DEFB105B,DEFB106B,DEFB107B,DEFB107A,DEFB105A,DEFB106A	-8493,-9776,-368,-368,-8493,-9776
chr8:7353683-7355508	chr8	-	7671338	7672920	False	NM_001040703,NM_001040704,NM_001040705,NM_001037668,NM_152250,NM_152251	chr8,chr8,chr8,chr8,chr8,chr8	-,+,-,-,-,+	DEFB105B,DEFB106B,DEFB107B,DEFB107A,DEFB105A,DEFB106A	8490,9773,368,368,8490,9773
chr6:27529671-27531216	chr6	+	27529799	27530988	True	NM_001076781,NM_007149	chr6,chr6	+,-	ZNF391,ZNF184	-173326,-88902
chrX:89367742-89368473	chrY	+	3550972	3551518	False	NM_003140,NM_139214	chrY,chrY	-,+	SRY,TGIF2LY	-895180,-103900
chrX:89367742-89368473	chrX	+	89367819	89368456	True	NM_138960,NM_004538	chrX,chrX	+,-	TGIF2LX,NAP1L3	-190933,3560289
chr20:43342097-43343330	chr20	+	43342125	43343033	True	NR_034104,NM_003881	chr20,chr20	-,+	LOC79015,WISP2	-41745,851
chr16:28608469-28609412	chr16	+	28608537	28609268	True	NM_138414,NM_177528,NM_001054	chr16,chr16,chr16	+,-,-	CCDC101,SULT1A2,SULT1A2	-43339,-736,-146
chr17:1648545-1649084	chr17	+	1648583	1649123	True	NM_001165921,NM_001165920,NM_000934,NR_028505	chr17,chr17,chr17,chr17	+,+,+,-	SERPINF2,SERPINF2,SERPINF2,C17orf91	-2504,-2314,-2504,-29017
chr5:179072946-179074044	chr5	+	179073032	179073795	True	NM_001024649,NM_001142306	chr5,chr5	+,-	CANX,C5orf60	52134,-985
chr13:103401344-103403238	chr13	+	103401690	103403276	True	NM_001159596,NM_001146197	chr13,chr13	+,-	BIVM,C13orf40	48122,8196
chr1:151119370-151119690	chr1	+	151119378	151119720	True	NM_001178061,NM_030913,NM_001178062,NM_024575,NM_001204848	chr1,chr1,chr1,chr1,chr1	-,-,-,+,+	SEMA6C,SEMA6C,SEMA6C,TNFAIP8L2,TNFAIP8L2-SCNM1	-238,-238,-238,9384,9384
chr19:29425347-29427329	chr19	+	29425711	29427179	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	28858,277007
chr8:4852210-4852632	chr8	+	4852355	4852587	True	NM_033225,NM_001172574	chr8,chr8	-,+	CSMD1,MCPH1	-27,1411525
chr19:19281945-19282520	chr19	+	19282076	19282518	True	NM_001145785,NM_003721	chr19,chr19	-,+	MEF2B,RFXANK	-978,20489
chr10:104612938-104613611	chr10	+	104613538	104613626	True	NM_000102,NM_144591,NR_037644,NM_001136200	chr10,chr10,chr10,chr10	-,+,+,+	CYP17A1,C10orf32,C10orf32-AS3MT,C10orf32	-16248,340,340,340
chr12:109826543-109826893	chr12	+	109826569	109826925	True	NM_213596,NM_001101421	chr12,chr12	-,+	FOXN4,MYO1H	-79544,-96
chr3:129722128-129722398	chr3	+	129722128	129722444	True	NM_007117,NR_024252	chr3,chr3	+,-	TRH,LOC729375	-29065,107882
chrX:10578051-10579680	chrX	+	10578193	10579669	True	NM_000381,NM_033289,NM_001830	chrX,chrX,chrX	-,-,+	MID1,MID1,CLCN4	9055,9055,-453259
chr5:77054769-77056331	chr5	+	77054776	77056020	True	NM_003719,NM_004607	chr5,chr5	+,-	PDE8B,TBCA	-548121,16215
chr6:39291736-39292798	chr6	+	39291823	39292484	True	NM_001135105,NM_032115,NM_001135107,NM_001135106,NM_001135111,NM_031460,NM_002062	chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,-,-,-,+	KCNK16,KCNK16,KCNK16,KCNK16,KCNK17,KCNK17,GLP1R	-1493,-1493,-1493,-1493,-9586,-9587,-275317
chr1:181008721-181010190	chr1	+	181009092	181009844	True	NM_005819,NM_001531,NM_001195000,NM_001195035,NM_001194999	chr1,chr1,chr1,chr1,chr1	-,+,+,+,+	STX6,MR1,MR1,MR1,MR1	-17046,-6582,-6582,-6582,-6582
chr2:149633230-149633482	chr2	+	149633461	149633521	True	NM_015702,NM_004522	chr2,chr2	-,+	MMADHC,KIF5C	810859,-693
chr7:100843094-100843553	chr7	+	100843491	100843597	True	NM_178176,NM_006349	chr7,chr7	-,+	MOGAT3,ZNHIT1	755,17387
chr5:93074865-93076424	chr5	+	93074886	93076235	True	NM_005654,NM_153216	chr5,chr5	+,-	NR2F1,POU5F2	-155894,1125
chr7:100083082-100083882	chr7	+	100083106	100083774	True	NM_173564,NM_030935	chr7,chr7	+,-	C7orf51,TSC22D4	-1607,-6204
chr19:16189358-16189688	chr19	+	16189371	16189706	True	NM_003290,NM_054113	chr19,chr19	+,-	TPM4,CIB3	-2287,94630
chr15:77222694-77223953	chr15	+	77222694	77223582	True	NM_020843,NM_002902	chr15,chr15	-,+	SCAPER,RCN2	-46477,379
chr9:87284043-87284300	chr9	+	87284052	87284338	True	NM_006180,NM_022127,NM_001007097,NM_001018064,NM_001018065,NM_001018066	chr9,chr9,chr9,chr9,chr9,chr9	+,-,+,+,+,+	NTRK2,SLC28A3,NTRK2,NTRK2,NTRK2,NTRK2	-642,-300639,287,-642,256,256
chr12:49088005-49088900	chr12	+	49088010	49088947	True	NR_024266,NR_029448	chr12,chr12	-,+	LOC144438,LOC255411	-1781,32270
chr1:113007098-113008197	chr1	+	113007294	113008227	True	NM_004185,NR_036210	chr1,chr1	+,-	WNT2B,MIR4256	1812,-2839
chr17:74078038-74079516	chr17	+	74078346	74079506	True	NM_003857,NM_180990,NM_014230	chr17,chr17,chr17	+,+,-	GALR2,ZACN,SRP68	-7505,-3134,-9739
chr19:18063941-18064661	chr19	+	18064062	18064422	True	NM_002248,NM_000215	chr19,chr19	+,-	KCNN1,JAK3	-2002,-105221
chr19:40328325-40329673	chr19	+	40328365	40329545	True	NM_006484,NM_004714,NM_001143832,NM_006483,NM_001436	chr19,chr19,chr19,chr19,chr19	-,-,+,-,-	DYRK1B,DYRK1B,LEUTX,DYRK1B,FBL	-3524,-3524,-61182,-3524,7560
chr15:34786655-34786873	chr15	+	34786657	34786917	True	NM_175741,NR_036050	chr15,chr15	+,-	C15orf55,MIR1233-1	-148642,33705
chr1:176178069-176179454	chr1	+	176178671	176179442	True	NM_021936,NM_001001740,NM_022457	chr1,chr1,chr1	+,-,-	PAPPA2,RFWD2,RFWD2	252864,-2301,-2301
chr17:5029367-5030987	chr17	+	5029420	5030957	True	NM_014519,NM_004505	chr17,chr17	-,+	ZNF232,USP6	-3023,729
chr1:155279645-155279983	chr1	+	155279719	155280015	True	NM_001135822,NM_002004,NM_000298,NM_001135821,NM_181871	chr1,chr1,chr1,chr1,chr1	+,+,-,+,-	FDPS,FDPS,PKLR,FDPS,PKLR	-1231,-1231,-8494,-1065,-8927
chr12:53578063-53579196	chr12	+	53578330	53579216	True	NM_001004304,NM_015989	chr12,chr12	+,-	ZNF740,CSAD	-3846,-3900
chr19:38746018-38746637	chr19	+	38746070	38746612	True	NM_021102,NM_001166103,NM_033256	chr19,chr19,chr19	+,+,-	SPINT2,SPINT2,PPP1R14A	8485,8485,610
chr3:186741509-186741739	chr3	+	186741685	186741761	True	NM_003032,NM_052969	chr3,chr3	+,-	ST6GAL1,RPL39L	-2075,115552
chr18:31803789-31804539	chr18	+	31803975	31804437	True	NM_001198548,NM_001392,NM_001198546,NM_001198547,NM_003787,NR_036752	chr18,chr18,chr18,chr18,chr18,chr18	-,+,-,-,-,-	NOL4,DTNA,NOL4,NOL4,NOL4,NOL4	-460,268816,-460,-1541,-460,-1541
chr11:109960659-109961765	chr11	+	109960719	109961801	True	NM_033390,NM_002906	chr11,chr11	+,-	ZC3H12C,RDX	2285,205686
chr10:75412350-75413163	chr10	+	75412557	75412867	True	NM_024875,NM_001114133,NM_004922	chr10,chr10,chr10	-,-,+	SYNPO2L,SYNPO2L,SEC24C	-1770,3015,91263
chr5:110578756-110579436	chr5	+	110578779	110579455	True	NM_001744,NM_139164	chr5,chr5	+,-	CAMK4,STARD4	-18891,268752
chr6:18410095-18410821	chr6	+	18410116	18410846	True	NM_182757,NM_003472	chr6,chr6	+,-	RNF144B,DEK	-22586,-145317
chr19:41392143-41392419	chr19	+	41392182	41392465	True	NM_030589,NR_001278,NM_000764	chr19,chr19,chr19	-,+,-	CYP2A7,CYP2B7P1,CYP2A7	-3525,37704,-3525
chr19:41392143-41392419	chr19	+	41360397	41360680	False	NM_000762,NM_053046	chr19,chr19	-,+	CYP2A6,EGLN2	-4045,-55114
chr15:91264883-91265499	chr15	+	91265183	91265256	True	NM_198527,NM_000057	chr15,chr15	-,+	HDDC3,BLM	210573,-4662
chr1:46919023-46919265	chr1	+	46919043	46919295	True	NM_147192,NM_001097611	chr1,chr1	+,-	DMBX1,KNCN	53372,97642
chr6:24870092-24871874	chr6	+	24870091	24871921	True	NM_015864,NM_015895	chr6,chr6	-,+	FAM65B,GMNN	5712,-94978
chr16:54319622-54319846	chr16	+	54319669	54319755	True	NM_001080432,NM_024336	chr16,chr16	+,-	FTO,IRX3	-581845,673
chr17:43137747-43138207	chr17	+	43137945	43138193	True	NM_021079,NM_001128631,NM_024819	chr17,chr17,chr17	+,-,-	NMT1,DCAKD,DCAKD	486,-8967,330
chr5:101825428-101826639	chr5	+	101825795	101826347	True	NM_000919,NM_173488	chr5,chr5	+,-	PAM,SLCO6A1	375179,8423
chr22:31519842-31521334	chr22	+	31519925	31520847	True	NM_080430,NM_015715,NM_001002837	chr22,chr22,chr22	-,-,+	SELM,PLA2G3,INPP5J	-16374,15672,-1015
chr2:112656383-112656613	chr2	+	112656470	112656582	True	NM_022662,NM_006343	chr2,chr2	-,+	ANAPC1,MERTK	-14729,-330
chr1:197319204-197320344	chr1	+	197319328	197319905	True	NM_201253,NM_194314	chr1,chr1	+,-	CRB1,ZBTB41	-82045,-149656
chr17:15684858-15686278	chr17	+	15684860	15686296	True	NM_006470,NR_002211	chr17,chr17	-,+	TRIM16,MEIS3P1	-98667,3867
chr1:165324098-165324803	chr1	+	165324154	165324590	True	NM_177398,NM_001174069,NM_001005214	chr1,chr1,chr1	-,-,+	LMX1A,LMX1A,LRRC52	1412,938,188887
chr8:28558100-28558532	chr8	+	28558195	28558559	True	NM_001172562,NM_001440	chr8,chr8	-,+	INTS9,EXTL3	188923,593
chrX:92951841-92952057	chrX	+	92951933	92952097	True	NM_004538,NM_173698	chrX,chrX	-,+	NAP1L3,FAM133A	-23251,-22973
chr5:137223884-137225013	chr5	+	137224207	137224942	True	NM_014386,NM_006805	chr5,chr5	+,-	PKD2L2,HNRNPA0	182,-134168
chr1:6683632-6684423	chr1	+	6683642	6684234	True	NM_014851,NM_153812,NM_001195752,NM_001195753,NM_138350	chr1,chr1,chr1,chr1,chr1	-,+,+,+,+	KLHL21,PHF13,THAP3,THAP3,THAP3	-20713,-9937,975,690,975
chr2:103238430-103238985	chr2	+	103238430	103239023	True	NM_003048,NM_032718	chr2,chr2	+,-	SLC9A2,MFSD9	-2326,114369
chr13:24006278-24007387	chr13	+	24006292	24007341	True	NM_001204459,NM_014363	chr13,chr13	+,-	TNFRSF19,SACS	137167,552
chr6:107437100-107438999	chr6	+	107437356	107439014	True	NM_001080450,NM_016487	chr6,chr6	-,+	BEND3,C6orf203	-1720,-88007
chr6:126271951-126273934	chr6	+	126272558	126273679	True	NM_016063,NM_138571	chr6,chr6	-,+	HDDC2,HINT3	-649276,4181
chr7:139026318-139027059	chr7	+	139026612	139027103	True	NR_033999,NM_197964	chr7,chr7	-,+	LOC100129148,C7orf55	85219,-766
chr1:221511693-221513678	chr1	+	221511924	221513716	True	NM_021958,NR_024236	chr1,chr1	+,-	HLX,LOC400804	-459238,-2286
chr4:56822867-56823441	chr4	+	56823121	56823477	True	NM_006681,NM_025009	chr4,chr4	-,+	NMU,CEP135	-320656,-8138
chr1:17336183-17337382	chr1	+	17336274	17337329	True	NM_014675,NM_001141974,NM_001141973,NM_022089	chr1,chr1,chr1,chr1	+,-,-,-	CROCC,ATP13A2,ATP13A2,ATP13A2	-87880,1144,1144,1144
chr1:40217854-40218861	chr1	+	40217864	40218728	True	NM_022120,NM_001195007	chr1,chr1	-,+	OXCT2,PPIE	18342,-13398
chr12:111844857-111845107	chr12	+	111844887	111845029	True	NM_144671,NM_005475	chr12,chr12	-,+	FAM109A,SH2B3	-37962,-1186
chr1:85102548-85104206	chr1	+	85102648	85104177	True	NR_027379,NR_036561	chr1,chr1	-,+	C1orf180,SPATA1	-1945,-130732
chr11:72927492-72928371	chr11	+	72927639	72928151	True	NM_014824,NM_002564,NM_176071,NM_176072	chr11,chr11,chr11,chr11	-,+,+,+	FCHSD2,P2RY2,P2RY2,P2RY2	-74496,1192,1350,1192
chr1:179923617-179923992	chr1	+	179923621	179923819	True	NM_014810,NM_022347	chr1,chr1	+,-	CEP350,TOR1AIP2	88,-76680
chr10:89258167-89259800	chr10	+	89258213	89259730	True	NM_001178118,NR_024397,NM_001178117,NM_004897	chr10,chr10,chr10,chr10	+,-,+,+	MINPP1,LOC728190,MINPP1,MINPP1	7859,-155898,4492,4492
chr10:89258167-89259800	chr10	-	88999269	88999322	False	NM_001099338,NR_024397	chr10,chr10	+,-	FAM22A,LOC728190	-14118,103046
chr5:157850921-157852891	chr5	+	157851253	157852634	True	NM_014666,NM_173491	chr5,chr5	-,+	CLINT1,LSM11	-565070,-680556
chrX:42636752-42637115	chrX	+	42636772	42637157	True	NM_000240,NR_002191	chrX,chrX	+,-	MAOA,PPP1R2P9	878251,380
chr5:94744174-94745021	chr5	+	94744174	94744576	True	NM_024717,NM_152548	chr5,chr5	-,+	MCTP1,FAM81B	-123895,-17180
chr3:185083272-185083568	chr3	+	185083279	185083618	True	NM_001966,NM_004721	chr3,chr3	-,+	EHHADH,MAP3K13	-111393,-2360
chr11:111637056-111638320	chr11	+	111637249	111638092	True	NM_181699,NM_181700,NM_022761,NM_002716,NM_001177563,NM_001177562	chr11,chr11,chr11,chr11,chr11,chr11	-,-,+,-,-,-	PPP2R1B,PPP2R1B,C11orf1,PPP2R1B,PPP2R1B,PPP2R1B	-80,-80,111855,-80,-80,-80
chr17:43501748-43502524	chr17_ctg5_hap1	+	116892	117685	False	NM_001113738,NM_174919,NM_199282	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	+,-,-	ARL17A,ARHGAP27,ARHGAP27	78035,7772,501
chr17:43501748-43502524	chr17	+	43501767	43502561	True	NR_024435,NM_174919,NM_199282	chr17,chr17,chr17	+,-,-	LOC100133991,ARHGAP27,ARHGAP27	-162260,7771,501
chr6:27843173-27843405	chr6	+	27843192	27843266	True	NM_003546,NM_003511,NM_003533,NM_005322	chr6,chr6,chr6,chr6	-,+,-,-	HIST1H4L,HIST1H2AL,HIST1H3I,HIST1H1B	-1903,-10138,-3093,-7833
chr2:152117595-152118061	chr2	+	152117612	152118006	True	NM_007115,NM_198557	chr2,chr2	+,-	TNFAIP6,RBM43	96099,433
chr6:56487222-56489216	chr6	+	56487531	56488985	True	NM_152731,NM_015548	chr6,chr6	+,-	BEND6,DST	330787,18771
chr8:105350112-105351052	chr8	+	105350117	105350527	True	NM_001385,NM_030788	chr8,chr8	-,+	DPYS,TM7SF4	128800,1526
chr2:28613876-28614121	chr2	+	28613929	28614151	True	NM_017910,NM_005253	chr2,chr2	-,+	TRMT61B,FOSL2	479074,1627
chr5:178196679-178197831	chr5	+	178196766	178197684	True	NR_024035,NM_058230	chr5,chr5	-,+	AACSP1,ZNF354B	5643,89269
chr1:46921976-46922622	chr1	+	46922050	46922534	True	NM_147192,NM_001097611	chr1,chr1	+,-	DMBX1,KNCN	50133,94403
chr5:142152340-142154322	chr5	+	142152582	142154066	True	NM_015071,NM_001135608,NR_026696	chr5,chr5,chr5	+,+,-	ARHGAP26,ARHGAP26,FGF1	-2348,-2348,-74947
chr10:32218231-32218449	chr10	+	32218256	32218496	True	NM_001026383,NM_018287	chr10,chr10	+,-	CCDC7,ARHGAP12	516544,-486
chr3:195878032-195879994	chr3	+	195878186	195879668	True	NR_034088,NM_001039617	chr3,chr3	+,-	LOC401109,ZDHHC19	-8730,58682
chrX:33265094-33266249	chrX	+	33265093	33266129	True	NM_004006,NM_152631	chrX,chrX	-,+	DMD,FAM47B	-35420,1694783
chr19:56651579-56651969	chr19	+	56651603	56651919	True	NM_001002836,NM_018337	chr19,chr19	-,+	ZNF787,ZNF444	-18954,636
chr15:67458893-67459474	chr15	+	67458978	67459430	True	NM_001145104,NM_024666	chr15,chr15	+,-	SMAD3,AAGAB	-536,87694
chr1:180124569-180124899	chr1	+	180124620	180124900	True	NM_001004128,NR_037642,NM_002826	chr1,chr1,chr1	+,-,+	QSOX1,LOC100527964,QSOX1	-703,118966,-703
chr13:100720105-100721770	chr13	+	100720284	100721794	True	NM_033132,NM_000282	chr13,chr13	-,+	ZIC5,PCCA	-96106,19474
chr19:13043137-13043809	chr19	+	13043213	13043841	True	NM_004461,NM_004343	chr19,chr19	-,+	FARSA,CALR	767,5572
chr9:98909487-98911485	chr9	+	98909577	98911356	True	NR_033838,NR_024129	chr9,chr9	+,-	LOC158435,NCRNA00092	-81507,-125540
chr10:38519664-38521124	chr10	+	38519734	38520464	True	NR_027269,NR_024524	chr10,chr10	-,+	SEPT7L,LOC100129055	171366,-55186
chr16:1878204-1879058	chr16	+	1878321	1879077	True	NM_001142398,NM_005326,NM_031208,NM_001040427,NM_001018104	chr16,chr16,chr16,chr16,chr16	+,-,+,-,+	FAHD1,HAGH,FAHD1,HAGH,FAHD1	-1154,-1126,-1154,-1126,-1154
chr1:213124214-213124470	chr1	+	213124264	213124519	True	NM_001136474,NM_001136475,NM_144567,NM_024749	chr1,chr1,chr1,chr1	+,+,-,+	VASH2,VASH2,ANGEL2,VASH2	-428,-428,64699,-428
chr16:48400262-48401383	chr16	+	48400387	48401298	True	NM_001006610,NM_031490	chr16,chr16	-,+	SIAH1,LONP2	-603,-122233
chr10:50728271-50729412	chr10	+	50728391	50729461	True	NM_020984,NM_170753	chr10,chr10	+,-	CHAT,PGBD3	87679,2948
chr1:36789377-36789827	chr1	+	36789480	36789818	True	NM_024676,NM_018166	chr1,chr1	+,-	SH3D21,FAM176B	-16823,-13
chr15:71093483-71094690	chr15	+	71093538	71094321	True	NM_018003,NM_001199017	chr15,chr15	-,+	UACA,LRRC49	-37688,90606
chr2:29146262-29147710	chr2	+	29146422	29147702	True	NM_017910,NR_003074,NR_002741	chr2,chr2,chr2	-,+,+	TRMT61B,SNORD92,SNORD53	-53247,-9948,2230
chr6:34855657-34856156	chr6	+	34855701	34856205	True	NM_005643,NM_015245	chr6,chr6	-,+	TAF11,ANKS1A	-90,832
chr1:8485030-8485592	chr1	+	8485040	8485548	True	NM_001042682,NM_001080397	chr1,chr1	-,+	RERE,SLC45A1	-1293,-100701
chr19:54640325-54640691	chr19	+	54640371	54640725	True	NM_014516,NM_013342	chr19,chr19	+,-	CNOT3,TFPT	710,-21316
chr18:9716610-9717921	chr18	+	9716615	9717775	True	NM_006868,NM_005134	chr18,chr18	+,-	RAB31,PPP4R1	-8438,-102015
chr19:53607513-53608353	chr19	+	53607849	53608043	True	NM_001191055,NM_033288,NM_001102603,NM_198893	chr19,chr19,chr19,chr19	+,-,-,-	HERV-V2,ZNF160,ZNF160,ZNF160	-59922,-1162,-1162,-1162
chr15:40735166-40735799	chr15	+	40735180	40735832	True	NR_002208,NM_014952	chr15,chr15	-,+	MRPL42P5,BAHD1	88967,-1820
chr1:29140708-29141021	chr1	+	29140727	29140989	True	NM_000911,NM_005644	chr1,chr1	+,-	OPRD1,TAF12	-2124,-171123
chr6:16236532-16237720	chr6	+	16236541	16237581	True	NM_000332,NM_006877	chr6,chr6	-,+	ATXN1,GMPR	524197,1229
chrX:83713418-83714304	chrX	+	83713543	83713894	True	NM_001177478,NR_024062	chrX,chrX	-,+	HDX,UBE2DNL	43654,475262
chr18:47336329-47337880	chr18	+	47336443	47337852	True	NR_003003,NM_006111	chr18,chr18	+,-	SCARNA17,ACAA2	2540,2449
chr11:67272367-67272602	chr11	+	67272430	67272498	True	NM_003977,NM_005851,NM_004910,NM_001130848	chr11,chr11,chr11,chr11	+,-,-,-	AIP,CDK2AP2,PITPNM1,PITPNM1	-21976,3654,395,395
chr5:70753986-70755058	chr5	+	70754322	70754851	True	NM_018429,NR_033968	chr5,chr5	+,-	BDP1,LOC100049076	-2940,-199200
chr17:31618669-31618909	chr17	+	31618687	31618957	True	NM_183377,NM_173847	chr17,chr17	-,+	ACCN1,SPACA3	1099,-299856
chr6:1609333-1609589	chr6	+	1609370	1609634	True	NM_001453,NR_027116	chr6,chr6	+,-	FOXC1,LOC285768	1046,-507803
chr3:50336425-50336951	chr3	+	50336460	50336894	True	NM_001200016,NM_001200029,NM_003549,NM_001200030,NM_001200031,NM_001200032,NM_012191,NM_001200018,NM_153285,NM_007312,NM_153282,NM_153215,NM_153283,NM_006764,NM_033159	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,-,-,-,-,-,-,-,+,-,-,-	NAT6,HYAL3,HYAL3,HYAL3,HYAL3,HYAL3,NAT6,NAT6,HYAL1,HYAL1,HYAL1,C3orf45,HYAL1,IFRD2,HYAL1	8,-167,55,55,55,55,8,-140,4160,4160,4160,-19993,4160,-6434,4160
chr9:90533529-90533753	chr9	+	90533538	90533792	True	NM_001145124,NM_001039803	chr9,chr9	+,-	FAM75C1,CDK20	-712,55953
chr9:90533529-90533753	chr9	+	95645616	95645668	False	NM_001083536,NM_001007101,NM_031486	chr9,chr9,chr9	+,-,-	FGD3,ZNF484,ZNF484	63932,-5346,-5326
chr9:90533529-90533753	chr9	+	90530069	90530215	False	NM_001145124,NM_001039803	chr9,chr9	+,-	FAM75C1,CDK20	2661,59530
chr9:90533529-90533753	chr9	-	90749089	90749235	False	NM_001145124,NM_001166137	chr9,chr9	+,-	FAM75C1,FAM75C2	-216263,715
chr9:90533529-90533753	chr9	-	90752557	90752703	False	NM_001145124,NM_001166137	chr9,chr9	+,-	FAM75C1,FAM75C2	-219731,-2657
chr19:42368003-42368560	chr19	+	42368207	42368513	True	NM_001022,NM_173506	chr19,chr19	+,-	RPS19,LYPD4	-4270,-19699
chr22:24233590-24234024	chr22	+	24233599	24234007	True	NM_198440,NM_002415	chr22,chr22	-,+	DERL3,MIF	-52400,2557
chr5:108105914-108106728	chr5	+	108106090	108106553	True	NM_005246,NM_001163315	chr5,chr5	+,-	FER,FBXL17	-22623,-388291
chr11:6674132-6675738	chr11	+	6674255	6675761	True	NM_001014795,NM_003737	chr11,chr11	+,-	ILK,DCHS1	-49106,1363
chr19:34664945-34666181	chr19	+	34665168	34665803	True	NM_001114093,NM_015578,NR_027620	chr19,chr19,chr19	+,+,-	LSM14A,LSM14A,LOC643719	-1867,-1867,402851
chr7:152162883-152163786	chr7	+	152163300	152163646	True	NM_170606,NR_027387	chr7,chr7	-,+	MLL3,LOC100128822	-30210,-2152
chr14:102227212-102227484	chr14	+	102227438	102227526	True	NM_001161725,NM_001161726,NR_031649	chr14,chr14,chr14	+,+,-	PPP2R5C,PPP2R5C,MIR1247	608,608,-200679
chr16:47537594-47539114	chr16	+	47537895	47539103	True	NM_030790,NM_001031835	chr16,chr16	-,+	ITFG1,PHKB	-42880,-42737
chr14:24780929-24782097	chr14	+	24781038	24781955	True	NM_001164692,NM_019839,NM_181657,NM_001143919,NM_014430	chr14,chr14,chr14,chr14,chr14	+,+,+,+,-	LTB4R2,LTB4R2,LTB4R,LTB4R,CIDEB	-1733,-1733,357,-385,-462
chr9:99649315-99651200	chr9	+	99649676	99651173	True	NR_028350,NM_001001662	chr9,chr9	+,-	LOC441454,ZNF782	20183,-33287
chr19:50355348-50355680	chr19	+	50355348	50355696	True	NM_017432,NM_007254	chr19,chr19	+,-	PTOV1,PNKP	-983,15176
chr5:179052212-179053571	chr5	+	179052673	179052761	True	NM_005520,NM_001040452	chr5,chr5	-,+	HNRNPH1,RUFY1	-1951,-65999
chr16:21241173-21242787	chr16	+	21241205	21242667	True	NM_003460,NM_145865	chr16,chr16	-,+	ZP2,ANKS4B	-18337,2348
chr3:112706995-112708276	chr3	+	112707300	112708317	True	NM_138940,NM_138485,NM_014170	chr3,chr3,chr3	-,+,+	CD200R1,GTPBP8,GTPBP8	-13363,1482,1482
chr10:105005445-105005712	chr10	+	105005498	105005689	True	NM_012229,NM_001143909	chr10,chr10	-,+	NT5C2,LOC729020	-52442,-46
chr22:35594447-35595803	chr22	+	35594758	35595725	True	NM_001003681,NM_005368	chr22,chr22	+,-	HMGXB4,MB	57719,417709
chrX:133680287-133680506	chrX	+	133680293	133680477	True	NR_029962,NR_029946,NR_024607,NR_030399,NM_000194,NR_030227,NR_030587,NR_030228	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,+,-,-,-	MIR450A1,MIR424,MGC16121,MIR542,HPRT1,MIR450A2,MIR450B,MIR503	-5832,314,233,-4826,-86169,-5656,-6001,1
chr12:112451791-112452018	chr12	+	112451884	112451975	True	NM_001193453,NM_138341,NM_006817,NM_001193531,NM_001034025	chr12,chr12,chr12,chr12,chr12	-,-,+,-,+	TMEM116,TMEM116,ERP29,TMEM116,ERP29	-861,-861,-799,-861,-799
chr1:45769960-45770163	chr1	+	45770010	45770168	True	NR_024270,NM_001048174	chr1,chr1	+,-	LOC400752,MUTYH	-479,35511
chr6:109460390-109461386	chr6	+	109460424	109461275	True	NM_014454,NM_173830	chr6,chr6	-,+	SESN1,CEP57L1	-44716,-9968
chr4:189270301-189270762	chr4	+	189270301	189270615	True	NM_173553,NR_033869	chr4,chr4	-,+	TRIML2,LOC401164	-243893,106116
chr3:169530647-169531623	chr3	+	169530670	169531403	True	NM_001080460,NM_001172779,NM_153353,NM_001172780	chr3,chr3,chr3,chr3	+,-,-,-	LRRIQ4,LRRC34,LRRC34,LRRC34	8306,-96,-96,-96
chr9:19250890-19252823	chr9	+	19250924	19252713	True	NR_038064,NM_017925	chr9,chr9	-,+	PLIN2,DENND4C	-123320,38035
chr19:6590697-6591006	chr19	+	6590750	6591046	True	NM_001252,NM_003811	chr19,chr19	-,+	CD70,TNFSF9	167,-59791
chr18:57485977-57486964	chr18	+	57486275	57486835	True	NM_133459,NM_021127	chr18,chr18	-,+	CCBE1,PMAIP1	-121631,80356
chr4:100008455-100009583	chr4	+	100008859	100009542	True	NM_000671,NR_037884	chr4,chr4	-,+	ADH5,LOC100507053	440,465
chr4:57049290-57051281	chr4	+	57049504	57050899	True	NM_181806,NM_020722	chr4,chr4	-,+	AASDH,KIAA1211	202789,-13194
chr18:48491815-48492852	chr18	+	48491927	48492853	True	NM_018696,NM_001127174	chr18,chr18	+,-	ELAC1,MRO	1533,-140173
chr9:130526317-130526938	chr9	+	130526337	130526951	True	NM_001142532,NM_001142533,NM_001142531,NM_001142534,NR_036055,NM_005489	chr9,chr9,chr9,chr9,chr9,chr9	-,-,-,-,+,-	SH2D3C,SH2D3C,SH2D3C,SH2D3C,MIR2861,SH2D3C	-1640,-8754,-1618,-8776,21245,6720
chr5:69433161-69434509	chr5	+	69433317	69434547	True	NM_022877,NR_024054	chr5,chr5	+,-	SMN2,LOC100170939	-88019,87125
chr5:69433161-69434509	chr5	-	21970619	21970670	False	NR_003921,NM_004061	chr5,chr5	+,-	PMCHL1,CDH12	171790,883112
chr5:69433161-69434509	chr5	-	69275290	69276518	False	NM_022968,NR_024054	chr5,chr5	+,-	SERF1A,LOC100170939	44553,245155
chr5:69433161-69434509	chr5	+	70433631	70434822	False	NM_022877,NR_026578	chr5,chr5	+,-	SMN2,LOC647859	-212915,-44734
chr5:69433161-69434509	chr5	-	70150361	70151591	False	NM_022968,NM_004536	chr5,chr5	+,-	SERF1A,NAIP	44898,169401
chr19:36708121-36708709	chr19	+	36708310	36708508	True	NM_001042474,NM_007145,NM_152477,NM_001099638,NM_001099639	chr19,chr19,chr19,chr19,chr19	-,+,-,+,+	ZNF565,ZNF146,ZNF565,ZNF146,ZNF146	-2324,-2866,-2744,-2866,-2866
chr17:18906916-18907125	chr17	+	18906931	18907173	True	NM_001039999,NM_152351	chr17,chr17	-,+	FAM83G,SLC5A10	937,-51504
chr3:64007204-64008005	chr3	+	64007534	64008049	True	NM_014814,NM_001128149	chr3,chr3	-,+	PSMD6,ATXN7	1121,-54170
chr5:172387056-172388209	chr5	+	172387063	172388159	True	NM_016093,NR_026682,NR_026683	chr5,chr5,chr5	+,-,-	RPL26L1,LOC100268168,LOC100268168	-675,-692,-1285
chr12:57144532-57145154	chr12	+	57144546	57144947	True	NM_000946,NM_003725	chr12,chr12	-,+	PRIM1,HSD17B6	1263,12160
chrX:41578076-41578770	chrX	+	41578084	41578614	True	NM_080817,NM_001126054	chrX,chrX	+,-	GPR82,CASK	4793,203723
chr6:43152596-43153823	chr6	+	43152789	43153766	True	NM_006443,NM_015089	chr6,chr6	-,+	C6orf108,CUL9	43495,-2931
chr16:58582912-58583806	chr16	+	58583295	58583837	True	NR_002978,NM_024860	chr16,chr16	-,+	SNORA46,SETD6	-758,-33963
chr10:134739692-134740436	chr10	+	134740047	134740367	True	NM_173572,NM_001083909	chr10,chr10	-,+	C10orf93,GPR123	15772,161041
chr17:16283529-16283747	chr17	+	16283549	16283631	True	NM_018955,NM_181716	chr17,chr17	+,-	UBB,CENPV	735,-26737
chr11:93277583-93277978	chr11	+	93277618	93277998	True	NM_033395,NM_020179	chr11,chr11	+,-	KIAA1731,C11orf75	116817,-1072
chr12:52757281-52758226	chr12	+	52757302	52758226	True	NM_002284,NM_002283	chr12,chr12	+,-	KRT86,KRT85	-61704,3133
chr9:138528991-138530114	chr9	+	138529009	138529804	True	NM_001001676,NM_182974	chr9,chr9	+,-	LCN9,GLT6D1	25363,1633
chr12:25234320-25235800	chr12	+	25234458	25235818	True	NM_001101339,NM_006152	chr12,chr12	-,+	C12orf77,LRMP	-84085,-29335
chr3:98244168-98244908	chr3	+	98244238	98244924	True	NM_001040199,NM_005290,NM_001040182,NM_001040183,NM_001040181,NM_019895,NM_001040200	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-,-	CLDND1,GPR15,CLDND1,CLDND1,CLDND1,CLDND1,CLDND1	-2328,5953,-2328,-2328,-2328,-2328,-2328
chr5:173131036-173131541	chr5	+	173131127	173131512	True	NR_027109,NM_138369	chr5,chr5	+,-	LOC285593,BOD1	-124521,-87461
chr7:100271032-100271329	chr7	+	100271175	100271245	True	NM_005273,NM_022574	chr7,chr7	+,-	GNB2,GIGYF1	117,15675
chr1:2037261-2037630	chr1	+	2037263	2037505	True	NR_024445,NM_001033582	chr1,chr1	-,+	LOC100128003,PRKCZ	87569,-1161
chr21:14979003-14980952	chr21	+	14980214	14980682	True	NR_036164,NM_174981	chr21,chr21	-,+	MIR3156-3,POTED	-201433,1815
chr5:38259126-38260926	chr5	+	38259225	38260942	True	NM_152403,NM_001127671	chr5,chr5	+,-	EGFLAM,LIFR	-743,295860
chr6:150346884-150347126	chr6	+	150346892	150347010	True	NM_025218,NM_130900	chr6,chr6	+,-	ULBP1,RAET1L	-61800,-224
chr16:2285595-2286198	chr16	+	2285686	2286232	True	NM_001374,NM_001178029	chr16,chr16	+,-	DNASE1L2,ECI1	235,15420
chr1:46932327-46932546	chr1	+	46932332	46932530	True	NM_147192,NM_001097611	chr1,chr1	+,-	DMBX1,KNCN	40137,84407
chr1:53533052-53533394	chr1	+	53533113	53533327	True	NM_153703,NM_006671,NM_001199082,NM_001199080,NM_001199081	chr1,chr1,chr1,chr1,chr1	+,-,+,+,+	PODN,SLC1A7,PODN,PODN,PODN	-5440,75012,-5440,-5440,-5279
chr2:95536175-95537270	chr2	+	95536451	95537297	True	NR_003366,NM_144705	chr2,chr2	-,+	ANKRD20A8P,TEKT4	-13631,10
chr17:61960408-61960865	chr17	+	61960703	61960772	True	NM_020991,NM_022645,NM_022644,NM_022557,NM_022556,NR_002947,NM_002059,NM_022558	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,+,-,-	CSH2,CSH2,CSH2,GH2,GH2,TCAM1P,GH2,GH2	-9614,-9614,-9614,-1480,-1480,-26383,-1480,-1480
chr1:113248294-113248526	chr1	+	113248297	113248525	True	NM_001042678,NM_001042679,NM_005167,NM_001004440,NM_175744	chr1,chr1,chr1,chr1,chr1	-,-,-,+,-	RHOC,RHOC,PPM1J,FAM19A3,RHOC	1550,1203,9475,14663,1550
chr2:223164917-223165723	chr2	+	223164929	223165736	True	NM_013942,NM_153038,NM_181461,NM_001127366,NM_181460,NM_181457,NM_000438,NM_181458,NM_181459	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	-,+,-,-,-,-,-,-,-	PAX3,CCDC140,PAX3,PAX3,PAX3,PAX3,PAX3,PAX3,PAX3	-1214,-2115,-1214,-1214,-1214,-1214,-1214,-1214,-1214
chrX:15673583-15675461	chrX	+	15673816	15675509	True	NM_020665,NR_026551	chrX,chrX	-,+	TMEM27,CA5BP1	7706,17529
chrX:134231965-134232217	chrX	+	134232125	134232189	True	NR_024493,NM_001078171	chrX,chrX	-,+	NCRNA00087,FAM127A	594,-65843
chr22:16988681-16989165	chr22	+	16988687	16989178	True	NM_014406,NR_001591	chr22,chr22	-,+	CCT8L2,psiTPTE22	84573,93622
chr1:11864427-11865289	chr1	+	11864562	11865219	True	NM_001286,NM_021735,NM_021736,NM_021737,NM_005957	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	CLCN6,CLCN6,CLCN6,CLCN6,MTHFR	987,987,987,987,992
chrY:7141318-7141556	chrY	+	7141334	7141548	True	NR_028062,NM_001143	chrY,chrY	+,-	PRKY,AMELY	464,-399266
chr12:121415327-121415925	chr12	+	121415654	121415872	True	NR_024345,NM_000545	chr12,chr12	-,+	NCRNA00262,HNF1A	-5559,676
chr2:178194565-178195779	chr2	+	178194605	178195520	True	NM_003659,NR_026966	chr2,chr2	+,-	AGPS,LOC100130691	61950,61949
chr4:108641753-108642098	chr4	+	108641802	108642009	True	NM_001136258,NM_005443	chr4,chr4	+,-	SGMS2,PAPSS1	103711,-383
chr14:91526651-91527109	chr14	+	91526665	91527151	True	NM_182398,NM_004755,NM_001102366	chr14,chr14,chr14	-,-,+	RPS6KA5,RPS6KA5,C14orf159	-46,-46,53205
chr6:27732511-27733944	chr6	+	27732758	27733828	True	NM_003509,NM_003519	chr6,chr6	+,-	HIST1H2AI,HIST1H2BL	42148,41931
chr14:23791532-23792212	chr14	+	23791607	23792163	True	NR_026862,NM_004643	chr14,chr14	-,+	PPP1R3E,PABPN1	-19550,-2261
chr7:63586207-63586763	chr7	+	63586206	63586809	True	NM_178558,NM_001159524,NM_001159522	chr7,chr7,chr7	-,+,+	ZNF680,ZNF735,ZNF727	436746,80771,-80443
chrX:83723699-83725286	chrX	+	83723750	83725230	True	NM_001177478,NR_024062	chrX,chrX	-,+	HDX,UBE2DNL	32324,463926
chr17:73009442-73010371	chr17	+	73009449	73010197	True	NM_001545,NM_001003785	chr17,chr17	+,-	ICT1,ATP5H	-720,32927
chr4:122078269-122079046	chr4	+	122078335	122079035	True	NM_024873,NR_024365	chr4,chr4	-,+	TNIP3,LOC100192379	6491,606704
chr5:130970431-130970732	chr5	+	130970519	130970725	True	NM_001164389,NM_001164388,NM_016340,NM_001164390,NM_001164386,NM_001164387,NM_020240	chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,-,-,+	RAPGEF6,RAPGEF6,RAPGEF6,RAPGEF6,RAPGEF6,RAPGEF6,CDC42SE2	254,254,254,254,254,254,-370868
chr3:189442279-189442609	chr3	+	189442443	189442593	True	NM_018192,NM_001114982	chr3,chr3	-,+	LEPREL1,TP63	396365,64855
chr11:105893153-105893807	chr11	+	105893314	105893845	True	NM_032424,NM_015423	chr11,chr11	-,+	KIAA1826,AASDHPPT	-360,54446
chr4:115559287-115561277	chr4	+	115559614	115561100	True	NR_030303,NM_022569,NM_003360	chr4,chr4,chr4	+,-,+	MIR577,NDST4,UGT8	16814,473982,-16142
chr7:51385001-51385230	chr7	+	51385099	51385177	True	NM_015198,NR_033845	chr7,chr7	-,+	COBL,LOC100129427	-584,-785693
chr1:38411486-38412121	chr1	+	38411642	38411938	True	NM_005540,NM_016037	chr1,chr1	-,+	INPP5B,UTP11L	841,66445
chr6:14708615-14709070	chr6	+	14708628	14709001	True	NM_001031713,NM_004973	chr6,chr6	-,+	CCDC90A,JARID2	-893839,537525
chr8:57907136-57908484	chr8	+	57907140	57908175	True	NR_026772,NM_017813	chr8,chr8	+,-	C8orf71,IMPAD1	283926,-713
chr19:35717288-35717856	chr19	+	35717394	35717852	True	NM_152481,NM_015925	chr19,chr19	-,+	FAM187B,LSR	1826,21706
chr15:93635239-93637159	chr15	+	93635244	93637148	True	NM_001166287,NM_020211,NR_036136	chr15,chr15,chr15	-,-,+	RGMA,RGMA,MIR3175	-3492,-2801,-187666
chrX:153883829-153884163	chrX	+	153883888	153884208	True	NM_172377,NM_020994,NM_139250	chrX,chrX,chrX	-,-,+	CTAG2,CTAG2,CTAG1A	-2035,-2035,-70521
chr2:112896118-112897973	chr2	+	112896145	112898019	True	NM_001128165,NM_032494,NM_153214	chr2,chr2,chr2	+,-,+	FBLN7,ZC3H8,FBLN7	-234,114695,-234
chr1:162079974-162080258	chr1	+	162080021	162080297	True	NM_014697,NM_015441	chr1,chr1	+,-	NOS1AP,OLFML2B	-40491,-86377
chr2:101871924-101872319	chr2	+	101871972	101872214	True	NR_003070,NM_017546	chr2,chr2	-,+	SNORD89,C2orf29	17347,-2684
chr15:67358453-67358710	chr15	+	67358569	67358693	True	NM_005902,NM_024666	chr15,chr15	+,-	SMAD3,AAGAB	-425,188431
chr19:19756163-19756833	chr19	+	19756449	19756809	True	NM_033204,NM_016573	chr19,chr19	+,-	ZNF101,GMIP	22853,-1994
chr19:41355837-41356225	chr19	+	41355941	41356205	True	NM_000762,NM_053046	chr19,chr19	-,+	CYP2A6,EGLN2	197,-50658
chr19:41355837-41356225	chr19	-	41594502	41594552	False	NM_030589,NM_000766	chr19,chr19	-,+	CYP2A7,CYP2A13	-205845,-185
chr19:41355837-41356225	chr19	+	41533276	41533343	False	NM_030589,NM_000767	chr19,chr19	-,+	CYP2A7,CYP2B6	-144619,-36136
chr16:70834484-70834846	chr16	+	70834548	70834791	True	NR_034083,NM_018052	chr16,chr16	+,-	LOC100130894,VAC14	-45636,320
chr16:3062127-3062414	chr16	+	3062224	3062388	True	NM_021195,NM_020982,NM_016639	chr16,chr16,chr16	-,+,+	CLDN6,CLDN9,TNFRSF12A	5850,68,7924
chr3:118957036-118958027	chr3	+	118957165	118957920	True	NM_212543,NM_003778,NM_020754	chr3,chr3,chr3	-,-,+	B4GALT4,B4GALT4,ARHGAP31	1883,1883,55299
chr5:132146814-132147797	chr5	+	132147070	132147707	True	NM_175873,NM_133456	chr5,chr5	+,-	ANKRD43,SHROOM1	1325,14360
chr16:56227674-56228416	chr16	+	56227686	56228038	True	NM_020988,NR_026889,NR_027078,NM_138736	chr16,chr16,chr16,chr16	+,-,-,+	GNAO1,DKFZP434H168,LOC283856,GNAO1	-2486,449,-2680,-2486
chrX:53461384-53462425	chrX	+	53461634	53462439	True	NM_001037811,NM_001031745,NM_004493	chrX,chrX,chrX	-,+,-	HSD17B10,RIBC1,HSD17B10	-311,-11802,-311
chr4:42098881-42099561	chr4	+	42098908	42099435	True	NM_006345,NM_001159547	chr4,chr4	+,-	SLC30A9,BEND4	-106444,55518
chr11:118122641-118122863	chr11	+	118122656	118122776	True	NM_198275,NM_000733	chr11,chr11	-,+	MPZL3,CD3E	285,52518
chr5:55029353-55029837	chr5	+	55029510	55029694	True	NM_173514,NM_001142549,NM_001166533,NM_024415	chr5,chr5,chr5,chr5	-,+,+,+	SLC38A9,DDX4,DDX4,DDX4	-21347,4150,4150,4150
chr6:15659623-15660644	chr6	+	15659670	15660687	True	NM_183040,NR_036448,NM_004973,NM_032122	chr6,chr6,chr6,chr6	-,-,+,-	DTNBP1,DTNBP1,JARID2,DTNBP1	2652,2652,-413194,2652
chr15:100275489-100276311	chr15	+	100275492	100276258	True	NM_001130928,NM_152449	chr15,chr15	+,-	MEF2A,LYSMD4	-102360,-1866
chr1:156262747-156263087	chr1	+	156262758	156262885	True	NM_144580,NM_032323,NM_001004319	chr1,chr1,chr1	-,+,-	C1orf85,TMEM79,VHLL	2615,-8739,6594
chr1:33815719-33815949	chr1	+	33815795	33815915	True	NM_004427,NM_152493	chr1,chr1	-,+	PHC2,ZNF362	-296,-93672
chr15:25445506-25446046	chr15	+	25445637	25446013	True	NR_003314,NR_003313,NR_003312,NR_003311,NR_003310,NR_003297,NR_003308,NR_003309,NM_130838,NR_003301,NR_003302,NR_003304,NR_003305,NR_003306,NR_003307	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,-,+,+,+,+,+,+	SNORD115-22,SNORD115-21,SNORD115-20,SNORD115-19,SNORD115-18,SNORD115-5,SNORD115-16,SNORD115-17,UBE3A,SNORD115-9,SNORD115-10,SNORD115-12,SNORD115-13,SNORD115-14,SNORD115-15	9051,5395,5395,456,456,-9122,-1093,456,204690,-9125,-9125,-9125,-7220,-5620,5395
chr8:22788359-22789136	chr8	+	22788363	22789071	True	NM_144962,NM_001160036	chr8,chr8	-,+	PEBP4,RHOBTB2	-2942,55858
chr14:19552527-19552825	chr14	+	19552531	19552849	True	NM_001145442,NR_027480,NM_001005356	chr14,chr14,chr14	-,+,+	POTEM,POTEG,POTEG	467473,515,515
chr14:19552527-19552825	chr14	-	20021024	20021096	False	NM_001145442,NM_172194	chr14,chr14	-,+	POTEM,OR4Q3	-752,194490
chr5:139176089-139176302	chr5	+	139176123	139176303	True	NM_032289,NM_001184935	chr5,chr5	+,-	PSD2,NRG2	-768,246631
chr8:145150250-145150524	chr8	+	145150264	145150522	True	NM_001916,NM_030974,NM_032272	chr8,chr8,chr8	+,-,+	CYC1,SHARPIN,MAF1	-355,8668,8782
chr4:143767886-143768105	chr4	+	143767961	143768021	True	NM_001101669,NM_032557,NM_003866	chr4,chr4,chr4	-,+,-	INPP4B,USP38,INPP4B	-357,338048,-357
chr12:45308791-45309482	chr12	+	45309223	45309527	True	NM_001025356,NM_001145110	chr12,chr12	+,-	ANO6,NELL2	300242,-1512
chr1:226250865-226251366	chr1	+	226250961	226251358	True	NM_152608,NM_002107,NR_002315	chr1,chr1,chr1	-,+,+	C1orf55,H3F3A,LOC440926	-63895,-604,-584
chr1:160062264-160062741	chr1	+	160062324	160062763	True	NM_052868,NM_004983	chr1,chr1	-,+	IGSF8,KCNJ9	5695,-11015
chr7:6628450-6628723	chr7	+	6628449	6628672	True	NM_024067,NM_001145118	chr7,chr7	+,-	C7orf26,GRID2IP	1242,-37382
chr7:100426225-100426768	chr7	+	100426224	100426532	True	NM_020246,NM_004444	chr7,chr7	+,-	SLC12A9,EPHB4	23825,-1081
chr1:226412104-226412626	chr1	+	226412205	226412676	True	NM_022735,NM_031944	chr1,chr1	-,+	ACBD3,MIXL1	-37782,-880
chr11:61062574-61062793	chr11	+	61062713	61062791	True	NM_015533,NM_152718	chr11,chr11	+,-	DAK,VWCE	37862,47
chr15:100347369-100347598	chr15	+	100347408	100347474	True	NR_003260,NM_001130928	chr15,chr15	-,+	DNM1P46,MEF2A	-276,-174276
chr15:100347369-100347598	chr15	-	102285191	102285730	False	NM_152334,NM_001005326	chr15,chr15	-,+	TARSL2,OR4F6	-20546,60192
chr7:131336358-131337247	chr7	+	131336571	131336955	True	NM_005397,NM_013255	chr7,chr7	-,+	PODXL,MKLN1	-95195,-324027
chr3:97706921-97708872	chr3	+	97706970	97708910	True	NM_153182,NM_054106	chr3,chr3	-,+	MINA,OR5AC2	-15675,97106
chr19:42637539-42638137	chr19	+	42637844	42638182	True	NM_022752,NM_002698,NR_036208	chr19,chr19,chr19	+,-,-	ZNF574,POU2F2,MIR4323	-57605,-1214,-179
chr10:42861407-42862246	chr10	+	42861459	42862112	True	NR_024380,NR_026827	chr10,chr10	-,+	LOC441666,LOC84856	1431,108826
chr1:159827928-159829735	chr1	+	159827933	159829546	True	NM_020125,NM_001013661,NM_001134233	chr1,chr1,chr1	+,-,-	SLAMF8,VSIG8,C1orf204	-31505,2952,-2796
chr1:36538845-36539292	chr1	+	36539091	36539222	True	NM_005202,NM_014466	chr1,chr1	-,+	COL8A2,TEKT2	26679,10453
chrX:69264373-69266345	chrX	+	69264487	69266019	True	NM_001002254,NM_207320	chrX,chrX	-,+	AWAT2,OTUD6A	3819,16321
chr5:92907063-92907763	chr5	+	92907138	92907677	True	NR_021490,NR_021491,NR_015369,NM_005654	chr5,chr5,chr5,chr5	-,-,-,+	FLJ42709,FLJ42709,FLJ42709,NR2F1	9377,9327,-639,11365
chr19:3700906-3701688	chr19	+	3701161	3701694	True	NM_014428,NM_012398,NM_001195733	chr19,chr19,chr19	+,-,-	TJP3,PIP5K1C,PIP5K1C	26679,-684,-684
chr3:195309331-195310053	chr3	+	195309846	195310092	True	NM_001647,NR_003265	chr3,chr3	-,+	APOD,SDHAP2	1034,74817
chr16:67184233-67184489	chr16	+	67184305	67184391	True	NM_003789,NM_033309,NM_018378	chr16,chr16,chr16	-,-,+	TRADD,B3GNT9,FBXL8	9471,561,9499
chr1:54360168-54360845	chr1	+	54360273	54360763	True	NM_000792,NM_213593,NR_036640,NM_018982,NR_036639,NM_001039716,NM_001039715	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,-,-,+,+	DIO1,DIO1,YIPF1,YIPF1,YIPF1,DIO1,DIO1	-463,-463,-4786,-4786,-4786,-463,-463
chr1:31196782-31197381	chr1	+	31196987	31197376	True	NR_034182,NM_002379	chr1,chr1	+,-	LOC100129196,MATN1	-5427,-555
chr1:41328193-41329003	chr1	+	41328233	41328910	True	NM_172163,NM_133467	chr1,chr1	+,-	KCNQ4,CITED4	-78600,-215
chr17:6924879-6925164	chr17	+	6924930	6925182	True	NR_030178,NM_174893,NM_001004333,NM_001142798,NM_001142799,NR_037715,NR_037716,NR_037717,NR_029712,NM_181844	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,+,+,+,+,+,+,-,+	MIR497,C17orf49,RNASEK,C17orf49,C17orf49,RNASEK,RNASEK,RNASEK-C17ORF49,MIR195,BCL6B	-3589,-6925,-9245,-6925,-6925,-9245,-9245,-9245,-3910,1186
chr2:228581877-228582577	chr2	+	228582053	228582617	True	NM_001130046,NM_025243	chr2,chr2	+,-	CCL20,SLC19A3	95940,178
chr22:21987840-21988361	chr22	+	21987856	21988250	True	NM_152612,NM_001017964,NM_022044	chr22,chr22,chr22	+,-,+	CCDC116,YDJC,SDF2L1	-821,-3516,8291
chr2:219220150-219221330	chr2	+	219220706	219221115	True	NM_198559,NM_022152	chr2,chr2	+,-	C2orf62,TMBIM1	463,-63426
chr15:28820086-28821028	chr15	+	28820244	28820869	True	NR_036443,NR_033351	chr15,chr15	+,-	HERC2P9,GOLGA8F	78718,-42101
chr15:28820086-28821028	chr15	-	28581050	28581675	False	NM_004667,NR_033351	chr15,chr15	-,+	HERC2,GOLGA8F	-13755,42108
chr15:28820086-28821028	chr15	-	20725169	20725793	False	NR_036432,NR_027411	chr15,chr15	-,+	HERC2P3,GOLGA8C	-13736,41880
chr15:28820086-28821028	chr15	-	23680228	23680287	False	NM_005664,NM_019066	chr15,chr15	+,-	MKRN3,MAGEL2	130166,212765
chr15:28820086-28821028	chr15	-	23391963	23392587	False	NR_036470,NR_002824	chr15,chr15	+,-	HERC2P7,HERC2P2	-1295,-13704
chr12:130824033-130824645	chr12	+	130824064	130824590	True	NR_033834,NM_004764,NM_001190971,NM_015347	chr12,chr12,chr12,chr12	-,+,+,-	FLJ31485,PIWIL1,PIWIL1,RIMBP2	-177841,-1682,-1682,177870
chr19:7553019-7553610	chr19	+	7553031	7553395	True	NM_080662,NM_198534	chr19,chr19	-,+	PEX11G,C19orf45	560,9049
chrX:588721-590431	chrY	+	538726	540420	False	NM_006883,NM_000451,NM_013239	chrY,chrY,chrY	+,+,-	SHOX,SHOX,PPP2R3B	-3698,-3698,-241036
chrX:588721-590431	chrX	+	588726	590420	True	NM_006883,NM_000451,NM_013239	chrX,chrX,chrX	+,+,-	SHOX,SHOX,PPP2R3B	-3698,-3698,-241036
chr3:98311061-98311591	chr3	+	98311077	98311609	True	NM_005290,NM_000097	chr3,chr3	+,-	GPR15,CPOX	-60257,896
chr5:149684649-149686468	chr5	+	149684940	149686409	True	NM_001008657,NM_001012301	chr5,chr5	+,-	TCOF1,ARSI	50792,-2415
chr3:130464721-130465347	chr3	+	130464972	130465310	True	NM_014602,NM_001199181	chr3,chr3	-,+	PIK3R4,ATP2C1	436,104058
chr21:15352148-15352411	chr21	+	15352214	15352426	True	NR_027270,NM_144770	chr21,chr21	-,+	C21orf81,RBM11	389,236039
chr12:53097121-53097322	chr12	+	53097150	53097336	True	NM_199187,NM_175078	chr12,chr12	+,-	KRT18,KRT77	245318,-39
chr14:62225973-62227573	chr14	+	62226065	62227322	True	NM_001017970,NM_003082	chr14,chr14	-,+	TMEM30B,SNAPC1	-477535,1752
chr2:198839839-198841464	chr2	+	198839895	198841163	True	NM_006226,NM_197970	chr2,chr2	+,-	PLCL1,BOLL	-170533,-188957
chr14:35763523-35765490	chr14	+	35763623	35765261	True	NM_002791,NM_020529	chr14,chr14	+,-	PSMA6,NFKBIA	-2100,108749
chr13:32622003-32623662	chr13	+	32622063	32623507	True	NM_001136571,NM_023037	chr13,chr13	-,+	ZAR1L,FRY	262634,-16685
chr11:124184663-124186094	chr11	+	124184810	124185782	True	NM_001005198,NM_001002918,NM_001002917	chr11,chr11,chr11	+,-,-	OR8G5,OR8D2,OR8D1	-50145,4367,-4148
chr1:203831258-203832536	chr1	+	203831314	203832406	True	NM_003094,NR_027902	chr1,chr1	+,-	SNRPE,C1orf157	-634,178036
chr14:90529066-90530228	chr14	+	90529166	90530252	True	NM_022054,NM_145231	chr14,chr14	+,-	KCNK13,EFCAB11	-1110,-108077
chr16:70471830-70472058	chr16	+	70471900	70472041	True	NM_145059,NM_006927	chr16,chr16	+,-	FUK,ST3GAL2	16456,1001
chr1:26501647-26502423	chr1	+	26501842	26502472	True	NM_015871,NM_032588,NM_006314,NR_023345	chr1,chr1,chr1,chr1	+,-,+,+	ZNF593,TRIM63,CNKSR1,CNKSR1	-5517,-107721,1508,1509
chr9:135820643-135822511	chr9	+	135820748	135822480	True	NM_001135031,NM_001162426,NM_001162427,NM_000368	chr9,chr9,chr9,chr9	+,-,-,-	GFI1B,TSC1,TSC1,TSC1	31617,-728,-728,-728
chr5:159656574-159657039	chr5	+	159656574	159656829	True	NM_001445,NM_024565	chr5,chr5	+,-	FABP6,CCNJL	-188,82801
chr3:3218274-3219843	chr3	+	3218634	3219812	True	NM_001173482,NM_016302,NM_182916	chr3,chr3,chr3	-,-,+	CRBN,CRBN,TRNT1	1639,1639,-50085
chr6:39772995-39773489	chr6	+	39772999	39773289	True	NM_145027,NM_015345	chr6,chr6	-,+	KIF6,DAAM2	-79818,-12283
chr15:27115560-27116263	chr15	+	27115690	27116006	True	NM_001165037,NM_000810,NM_021912	chr15,chr15,chr15	+,+,-	GABRA5,GABRA5,GABRB3	-3468,-3875,-96755
chr9:140355019-140355268	chr9	+	140355154	140355220	True	NM_001130971,NM_001130970,NM_006647,NM_001178064,NM_015537,NM_001130969	chr9,chr9,chr9,chr9,chr9,chr9	-,-,+,-,-,-	NELF,NELF,NOXA1,NELF,NELF,NELF	-1368,-1368,-37358,-1368,-1368,-1368
chr11:77789929-77790488	chr11	+	77789948	77790476	True	NM_001204054,NM_001204055,NM_003251,NM_001203260,NM_001203261,NM_001203262,NM_004549	chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,+,-,-,-,-	NDUFC2,NDUFC2,THRSP,NDUFC2-KCTD14,NDUFC2-KCTD14,NDUFC2-KCTD14,NDUFC2	839,839,-15092,839,839,839,839
chr3:149525716-149527078	chr3	+	149525881	149527005	True	NM_007282,NM_001144960,NM_183381	chr3,chr3,chr3	+,-,+	RNF13,C3orf16,RNF13	3469,-15271,3469
chrX:40944463-40944702	chrX	+	40944691	40944751	True	NM_001039591,NM_001039590,NR_027761	chrX,chrX,chrX	+,+,-	USP9X,USP9X,LOC100132831	136,136,-252242
chr11:63010583-63011376	chr11	+	63010640	63011390	True	NM_199352,NM_001039752	chr11,chr11	-,+	SLC22A25,SLC22A10	-13516,46039
chr14:98445282-98446544	chr14	+	98445396	98446544	True	NR_015430,NM_182560	chr14,chr14	-,+	C14orf64,C14orf177	-935,731405
chrX:100304704-100305567	chrX	+	100304785	100305284	True	NM_021637,NM_024917,NM_001167972,NM_001167971,NM_001167970	chrX,chrX,chrX,chrX,chrX	+,-,-,-,-	TMEM35,TRMT2B,TRMT2B,TRMT2B,TRMT2B	28551,1874,1874,1874,1874
chr6:32314085-32314378	chr6_mcf_hap5	+	3693850	3693923	False	NM_019111,NM_006781	chr6_mcf_hap5,chr6_mcf_hap5	+,-	HLA-DRA,C6orf10	92469,25369
chr6:32314085-32314378	chr6	+	32314281	32314354	True	NM_019111,NM_006781	chr6,chr6	+,-	HLA-DRA,C6orf10	93264,25353
chr6:32314085-32314378	chr6_mann_hap4	+	3657127	3657200	False	NM_019111,NM_006781	chr6_mann_hap4,chr6_mann_hap4	+,-	HLA-DRA,C6orf10	92478,25346
chr6:32314085-32314378	chr6_ssto_hap7	+	3661734	3661807	False	NM_019111,NM_006781	chr6_ssto_hap7,chr6_ssto_hap7	+,-	HLA-DRA,C6orf10	92475,25370
chr6:32314085-32314378	chr6_apd_hap1	+	3628665	3628738	False	NR_003129,NM_006781	chr6_apd_hap1,chr6_apd_hap1	+,-	RNF5P1,C6orf10	-167750,25354
chr15:66162257-66162519	chr15	+	66162373	66162449	True	NM_004663,NM_005848	chr15,chr15	+,-	RAB11A,DENND4A	-628,-77742
chr1:54353821-54354125	chr1	+	54353914	54354162	True	NM_018982,NM_213593,NR_036640,NM_000792,NR_036639,NM_001039716,NM_001039715	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,+,-,+,-,+,+	YIPF1,DIO1,YIPF1,DIO1,YIPF1,DIO1,DIO1	1375,5698,1375,5698,1375,5698,5698
chr1:42802448-42803071	chr1	+	42802631	42803080	True	NM_001198852,NM_001198850,NM_001198851,NM_014947,NM_173642	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	FOXJ3,FOXJ3,FOXJ3,FOXJ3,RIMKLA	-1745,-1083,-1995,-1728,43387
chr14:75744568-75745401	chr14	+	75744584	75745370	True	NM_006827,NM_005252	chr14,chr14	-,+	TMED10,FOS	-101235,110
chr11:118868122-118868743	chr11	+	118868164	118868595	True	NM_198489,NR_003040	chr11,chr11	+,-	CCDC84,RPL23AP64	256,5759
chr13:39612084-39612567	chr13	+	39612160	39612602	True	NM_001012754,NM_025138,NM_170719,NM_001017370	chr13,chr13,chr13,chr13	+,-,-,+	NHLRC3,C13orf23,C13orf23,NHLRC3	0,-36,-36,0
chr2:203775168-203776357	chr2	+	203775340	203776256	True	NM_024744,NM_018256,NM_001104586	chr2,chr2,chr2	+,-,+	ALS2CR8,WDR12,ALS2CR8	860,743,721
chr20:57558774-57559945	chr20	+	57558822	57559862	True	NM_001336,NM_198976	chr20,chr20	-,+	CTSZ,TH1L	22497,-2570
chr2:135033313-135033947	chr2	+	135033478	135033978	True	NM_002410,NM_030923	chr2,chr2	+,-	MGAT5,TMEM163	-21712,442649
chr11:3875537-3876184	chr11	+	3875572	3876162	True	NM_001665,NM_003156	chr11,chr11	-,+	RHOG,STIM1	-13359,770
chr3:131076083-131076408	chr3	+	131076328	131076447	True	NR_002949,NR_002985,NR_027766	chr3,chr3,chr3	+,-,+	NUDT16P1,SNORA58,NUDT16P1	4241,121687,4270
chr20:37352945-37353185	chr20	+	37353162	37353234	True	NM_080552,NR_027241	chr20,chr20	+,-	SLC32A1,LOC388796	-108,-289144
chr2:109213002-109213978	chr2	+	109213953	109214023	True	NM_004987,NM_022336,NM_001193488,NM_001193482	chr2,chr2,chr2,chr2	+,-,+,+	LIMS1,EDAR,LIMS1,LIMS1	-9237,391855,-9082,9593
chr19:35634540-35635772	chr19	+	35634591	35635681	True	NM_022006,NM_139284,NM_005031,NM_021902,NM_144779,NM_014164,NR_028406	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+,+	FXYD7,LGI4,FXYD1,FXYD1,FXYD5,FXYD5,FXYD5	-488,-8413,-4250,-4910,9990,9943,9990
chr3:129166693-129167489	chr3	+	129166895	129167393	True	NM_052985,NM_052989,NM_018262,NM_003925,NM_052990	chr3,chr3,chr3,chr3,chr3	+,+,+,-,+	IFT122,IFT122,IFT122,MBD4,IFT122	-7981,-7981,-7981,-8043,-7981
chr2:218621413-218621794	chr2	+	218621619	218621835	True	NR_034176,NR_026597	chr2,chr2	+,-	RUFY4,DIRC3	277821,-303
chr3:129800988-129802142	chr3	+	129801064	129801913	True	NM_001136152,NR_024252	chr3,chr3	+,-	ALG1L2,LOC729375	-441,28420
chr2:203735715-203736028	chr2	+	203735753	203735993	True	NM_178231,NM_001104586,NM_138468	chr2,chr2,chr2	-,+,-	ICA1L,ALS2CR8,ICA1L	252,40984,428
chr2:234160705-234161327	chr2	+	234160833	234161005	True	NM_019850,NM_001190267,NM_001190266,NM_198890,NM_030803,NM_017974	chr2,chr2,chr2,chr2,chr2,chr2	-,+,+,+,+,+	NGEF,ATG16L1,ATG16L1,ATG16L1,ATG16L1,ATG16L1	-282882,-675,-675,-675,-675,-675
chr20:654238-655722	chr20	+	654489	655587	True	NM_033129,NM_001042353	chr20,chr20	-,+	SCRT2,FAM110A	1286,158768
chr11:71163492-71164040	chr11	+	71163525	71163925	True	NM_018161,NM_001360,NM_001163817	chr11,chr11,chr11	+,-,-	NADSYN1,DHCR7,DHCR7	291,-4048,-4048
chr6:24666898-24667187	chr6	+	24666910	24667164	True	NM_018473,NM_016614,NM_001160094	chr6,chr6,chr6	+,-,+	ACOT13,TDP2,ACOT13	98,1,98
chrX:69645369-69645712	chrX	+	69645423	69645717	True	NM_001171192,NM_001171193,NM_017711,NM_001171191,NM_016484	chrX,chrX,chrX,chrX,chrX	+,+,+,+,-	GDPD2,GDPD2,GDPD2,GDPD2,PDZD11	-2593,-2593,-2593,-2593,-135625
chr11:6193134-6194072	chr11	+	6193382	6194097	True	NM_001005178,NM_001004052	chr11,chr11	+,-	OR52W1,OR52B2	26356,-1826
chr11:67573423-67573727	chr11	+	67573459	67573529	True	NM_007103,NR_024249	chr11,chr11	+,-	NDUFV1,LOC645332	-199187,-652
chr5:90679334-90679541	chr5	+	90679358	90679566	True	NM_020801,NR_027435	chr5,chr5	-,+	ARRDC3,LOC100129716	-209,-3245
chr19:14597741-14598203	chr19	+	14597860	14597988	True	NM_001146693,NM_202469,NM_202468,NM_005716,NM_202494,NM_202467,NM_202470	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,-,-,-,-,-	LOC100130932,GIPC1,GIPC1,GIPC1,GIPC1,GIPC1,GIPC1	1769,9006,9006,9006,9006,9006,9006
chr5:176812216-176812671	chr5	+	176812306	176812712	True	NM_001029886,NM_001167579,NM_003052	chr5,chr5,chr5	-,+,+	PFN3,SLC34A1,SLC34A1	14975,-925,-925
chr11:60969864-60970130	chr11	+	60969866	60970112	True	NM_001079807,NM_017966	chr11,chr11	+,-	PGA3,VPS37C	871,-40950
chr11:60969864-60970130	chr11	+	60988611	60988857	False	NM_017966,NM_001079808	chr11,chr11	-,+	VPS37C,PGA4	-59695,963
chr11:60969864-60970130	chr11	+	61007437	61007683	False	NM_014224,NM_152718	chr11,chr11	+,-	PGA5,VWCE	960,55155
chr11:102661964-102663345	chr11	+	102662028	102663387	True	NM_001080463,NM_002421,NM_001145938	chr11,chr11,chr11	+,-,-	DYNC2H1,MMP1,MMP1	316772,5630,5630
chr1:16768766-16769389	chr1	+	16768826	16769076	True	NM_018090,NM_198546,NM_001145277,NM_001145278	chr1,chr1,chr1,chr1	+,-,+,+	NECAP2,SPATA21,NECAP2,NECAP2	-1710,-4907,-1710,-1710
chr6:46095386-46097249	chr6	+	46095445	46097160	True	NM_021572,NM_014936	chr6,chr6	-,+	ENPP5,ENPP4	41607,540
chrX:12813159-12814430	chrX	+	12813189	12814101	True	NM_001039091,NR_030727,NM_002765	chrX,chrX,chrX	+,-,+	PRPS2,LOC349408,PRPS2	-3766,147370,-3766
chr1:38412121-38412550	chr1	+	38412144	38412514	True	NM_005540,NM_016037	chr1,chr1	-,+	INPP5B,UTP11L	265,65869
chr16:67255972-67257206	chr16	+	67256691	67257129	True	NM_012163,NM_014187,NM_001004055	chr16,chr16,chr16	-,+,-	LRRC29,TMEM208,LRRC29	3642,3886,3822
chr6:27432515-27432979	chr6	+	27432832	27432900	True	NM_001076781,NM_007149	chr6,chr6	+,-	ZNF391,ZNF184	-76359,8047
chr4:9499300-9499614	chr4	+	9499353	9499445	True	NR_031688,NM_001040448	chr4,chr4	-,+	MIR548I2,DEFB131	58542,-53144
chr4:9499300-9499614	chr4	+	8965392	8965442	False	NM_018942,NM_001040071	chr4,chr4	-,+	HMX1,LOC650293	-91849,-13966
chr19:58260459-58261656	chr19	+	58260662	58261520	True	NM_173632,NM_024833	chr19,chr19	+,-	ZNF776,ZNF671	-2549,-21667
chr6:42421670-42422226	chr6	+	42421732	42422167	True	NM_001184801,NM_033502	chr6,chr6	+,-	UBR2,TRERF1	109592,-1949
chr1:211990780-211992555	chr1	+	211991029	211992245	True	NM_016448,NM_014873	chr1,chr1	+,-	DTL,LPGAT1	216673,11922
chr2:73042042-73042334	chr2	+	73042218	73042295	True	NM_015189,NM_003124	chr2,chr2	-,+	EXOC6B,SPR	10943,72216
chr11:89819084-89819575	chr11	+	89819179	89819545	True	NM_001143975,NR_028346	chr11,chr11	+,-	UBTFL1,TRIM53	-112,-83503
chr11:89819084-89819575	chr11	-	89486706	89487072	False	NM_001146162,NM_020358	chr11,chr11	+,-	TRIM77,TRIM49	-43290,54721
chr16:69458126-69458590	chr16	+	69458256	69458634	True	NM_030579,NM_005652	chr16,chr16	+,-	CYB5B,TERF2	23,-38382
chr17:7989580-7990513	chr17	+	7989648	7990348	True	NR_036201,NM_001139	chr17,chr17	+,-	MIR4314,ALOX12B	1025,723
chr2:208573962-208575205	chr2	+	208574010	208575009	True	NM_001142300,NM_152523,NM_003468	chr2,chr2,chr2	+,+,-	CCNYL1,CCNYL1,FZD5	1254,1254,59184
chr16:68270280-68270509	chr16	+	68270364	68270438	True	NM_024939,NM_012320	chr16,chr16	-,+	ESRP2,PLA2G15	-228,8808
chr1:917451-917659	chr1	+	917534	917658	True	NR_027693,NM_032129	chr1,chr1	-,+	C1orf170,PLEKHN1	-61,-15708
chr14:103392088-103393014	chr14	+	103392243	103392899	True	NM_006035,NM_030943	chr14,chr14	-,+	CDC42BPB,AMN	130901,-3301
chr11:124295402-124296658	chr11	+	124295462	124296454	True	NM_001005196,NM_001005194	chr11,chr11	-,+	OR8B4,OR8A1	-695,143510
chr10:101945845-101946147	chr10	+	101945916	101946196	True	NM_006459,NM_005063,NM_001100626	chr10,chr10,chr10	-,+,-	ERLIN1,SCD,ERLIN1	-182,160575,-102
chr10:95354616-95356245	chr10	+	95355004	95356230	True	NM_006744,NM_006204	chr10,chr10	-,+	RBP4,PDE6C	4813,16114
chr1:154377001-154377479	chr1	+	154377054	154377516	True	NM_001010846,NM_181359,NM_000565	chr1,chr1,chr1	-,+,+	SHE,IL6R,IL6R	97060,152,152
chr8:141468614-141469522	chr8	+	141468729	141468949	True	NM_001160372,NM_017444,NM_031466	chr8,chr8,chr8	-,+,-	TRAPPC9,CHRAC1,TRAPPC9	-868,52451,-51
chr20:57463785-57464036	chr20	+	57463784	57463960	True	NM_001077489,NM_001077488,NM_000516,NR_002785,NR_003259,NM_080426	chr20,chr20,chr20,chr20,chr20,chr20	+,+,+,-,+,+	GNAS,GNAS,GNAS,GNAS-AS1,GNAS,GNAS	2465,2465,2465,-37826,219,2465
chr20:18131931-18132946	chr20	+	18132235	18132789	True	NR_028402,NM_020536,NM_021220	chr20,chr20,chr20	+,+,-	CSRP2BP,CSRP2BP,OVOL2	-6545,-9420,-93714
chr1:147931613-147932135	chr1	+	147931998	147932116	True	NM_001097616,NR_027468	chr1,chr1	+,-	GPR89C,FLJ39739	-506482,-18
chr1:147931613-147932135	chr1	+	144340877	144340927	False	NR_024584,NM_001037675,NR_024510,NR_024511	chr1,chr1,chr1,chr1	-,+,-,-	LOC728875,NBPF9,LOC728855,LOC728855	878,274031,-104,-104
chr1:147931613-147932135	chr1	-	149576310	149576360	False	NM_001024599,NR_024510	chr1,chr1	-,+	HIST2H2BF,LOC728855	-177081,92
chr1:205538991-205539320	chr1	+	205539006	205539338	True	NM_181644,NR_027086	chr1,chr1	+,-	MFSD4,LOC284578	-945,-13243
chr19:19925071-19925786	chr19	+	19925356	19925787	True	NM_001099269,NM_021047,NM_001145404	chr19,chr19,chr19	-,+,-	ZNF506,ZNF253,ZNF506	6823,50926,6823
chr3:178346382-178346915	chr3	+	178346404	178346947	True	NM_022470,NM_005832	chr3,chr3	-,+	ZMAT3,KCNMB2	442761,-69837
chr11:72852323-72852708	chr11	+	72852410	72852560	True	NM_014824,NM_002564	chr11,chr11	-,+	FCHSD2,P2RY2	633,76783
chr2:38358924-38359722	chr2	+	38358938	38359504	True	NR_027252,NM_000104	chr2,chr2	+,-	C2orf58,CYP1B1	-742,-55615
chr1:114523772-114524036	chr1	+	114523804	114524076	True	NM_006594,NM_020190	chr1,chr1	-,+	AP4B1,OLFML3	-76063,-1825
chr10:24501579-24502067	chr10	+	24501597	24502086	True	NM_019590,NM_001098501,NM_020824	chr10,chr10,chr10	+,+,-	KIAA1217,KIAA1217,ARHGAP21	-3928,-3928,510562
chr7:10979845-10980123	chr7	+	10979889	10980055	True	NM_002489,NM_014660	chr7,chr7	-,+	NDUFA4,PHF14	-76,33443
chr5:140525339-140527095	chr5	+	140525552	140526865	True	NR_001280,NM_031947,NM_018939	chr5,chr5,chr5	+,-,+	PCDHB17,SLC25A2,PCDHB6	8714,156798,2973
chr2:122514135-122514407	chr2	+	122514134	122514204	True	NM_032390,NM_004622	chr2,chr2	-,+	MKI67IP,TSN	-19631,-1073
chr12:68721583-68722173	chr12	+	68721597	68722222	True	NM_020128,NM_017440,NM_001205028,NM_001205029,NM_001010942	chr12,chr12,chr12,chr12,chr12	-,-,-,-,+	MDM1,MDM1,MDM1,MDM1,RAP1B	3998,3998,3998,3998,282429
chr18:24221971-24223646	chr18	+	24222036	24223489	True	NM_198991,NR_026908	chr18,chr18	-,+	KCTD1,C18orf16	-1728,221782
chr5:131562321-131562698	chr5	+	131562331	131562747	True	NM_001017973,NM_001142598,NM_001142599,NM_001017974,NM_001131027,NM_004199	chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,+,-	P4HA2,P4HA2,P4HA2,P4HA2,PDLIM4,P4HA2	238,859,859,859,30603,238
chr22:41694662-41695429	chr22	+	41694813	41695078	True	NM_017590,NM_002883	chr22,chr22	+,-	ZC3H7B,RANGAP1	2488,-12597
chr3:51426453-51428216	chr3	+	51426601	51428107	True	NM_001171904,NM_006010,NM_013286	chr3,chr3,chr3	-,+,+	VPRBP,MANF,RBM15B	105961,-3960,591
chr19:984113-984331	chr19	+	984149	984215	True	NM_024100,NM_001033026	chr19,chr19	+,-	WDR18,C19orf6	112,36976
chr12:53648021-53648376	chr12	+	53648025	53648259	True	NM_001170790,NM_032889,NM_000966	chr12,chr12,chr12	+,+,-	MFSD5,MFSD5,RARG	-2706,-2200,-21989
chr12:7944437-7944978	chr12	+	7944447	7944953	True	NM_024865,NM_203503	chr12,chr12	+,-	NANOG,CLEC4C	-2503,-42378
chr1:178079172-178080024	chr1	+	178079226	178079555	True	NR_027982,NM_170692	chr1,chr1	-,+	LOC100302401,RASAL2	-16098,-16421
chr12:6862966-6864247	chr12	+	6863126	6863839	True	NM_005439,NR_026581,NM_002824	chr12,chr12,chr12	-,-,+	MLF2,MLF2,PTMS	-1044,-490,11701
chr11:118838598-118839522	chr11	+	118838709	118838783	True	NR_003040,NM_181721	chr11,chr11	-,+	RPL23AP64,FOXR1	35582,3633
chr10:82297984-82298753	chr10	+	82298126	82298642	True	NM_207372,NM_138812,NM_001145719	chr10,chr10,chr10	+,-,+	SH2D4B,DYDC1,SH2D4B	-519,-181626,1932
chr11:64883485-64884114	chr11	+	64883488	64884150	True	NM_001997,NR_037568,NR_037567,NM_014205,NM_003273,NM_004927	chr11,chr11,chr11,chr11,chr11,chr11	-,+,+,-,+,+	FAU,MRPL49,MRPL49,ZNHIT2,TM7SF2,MRPL49	5572,5565,5504,1070,-4198,5565
chr13:53601956-53602978	chr13	+	53602122	53602709	True	NM_032949,NM_006418	chr13,chr13	-,+	PCDH8,OLFM4	-179347,166
chr5:79781964-79783263	chr5	+	79782285	79783280	True	NM_205548,NM_001004441	chr5,chr5	+,-	FAM151B,ANKRD34B	519,83074
chr3:15273195-15274347	chr3	+	15273325	15274400	True	NM_014296,NR_027927	chr3,chr3	+,-	CAPN7,COL6A4P1	-25656,-25859
chr17:13983823-13984948	chr17	+	13983853	13984895	True	NM_001007530,NM_001303	chr17,chr17	-,+	CDRT15,COX10	155318,-11186
chr12:57410766-57412059	chr12	+	57411057	57411944	True	NR_033654,NM_007264,NM_013251,NM_001178054	chr12,chr12,chr12,chr12	-,+,-,-	TAC3,GPR182,TAC3,TAC3	-713,-22753,-713,-713
chr7:65541226-65541840	chr7	+	65541251	65541807	True	NM_000181,NM_001024943,NM_001024944,NM_001024946,NM_000048	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	GUSB,ASL,ASL,ASL,ASL	-93950,-468,-468,-468,-526
chr17:7759207-7759707	chr17	+	7759212	7759452	True	NM_032356,NM_144607,NM_203411	chr17,chr17,chr17	-,+,+	LSMD1,CYB5D1,TMEM88	1770,1611,-879
chr12:132631707-132632143	chr12	+	132631817	132632169	True	NM_024078,NM_175066	chr12,chr12	+,-	NOC4L,DDX51	-2875,-2937
chr1:2935806-2936384	chr1	+	2935816	2936376	True	NM_080431,NR_015440	chr1,chr1	+,-	ACTRT2,FLJ42875	1669,47963
chr1:12888119-12888630	chr1	+	12888148	12888614	True	NM_023014,NM_001146344	chr1,chr1	+,-	PRAMEF2,PRAMEF11	28326,2700
chr3:187419614-187421033	chr3	+	187419967	187421069	True	NR_034062,NM_001004312	chr3,chr3	+,-	LOC100131635,RTP2	136,44
chr17:58198309-58199594	chr17	+	58198485	58199577	True	NM_000717,NR_027408	chr17,chr17	+,-	CA4,LOC653653	27724,-18205
chr17:58198309-58199594	chr17	-	58101690	58102782	False	NM_000717,NR_002924	chr17,chr17	+,-	CA4,DHX40P1	124519,-5354
chr16:50584172-50584550	chr16	+	50584192	50584491	True	NM_001144972,NM_033119	chr16,chr16	-,+	SNX20,NKD1	130823,-2002
chr7:5921640-5922205	chr7	+	5921745	5922245	True	NM_001097622,NM_001099697	chr7,chr7	+,-	OCM,RSPH10B2	-1368,88119
chr7:5921640-5922205	chr7	-	97618187	97618250	False	NM_006188,NM_014916	chr7,chr7	-,+	OCM2,LMTK2	1229,117946
chr3:156395849-156396582	chr3	+	156395862	156396612	True	NM_001184718,NM_015508,NM_001184717,NR_027954	chr3,chr3,chr3,chr3	+,+,+,-	TIPARP,TIPARP,TIPARP,LOC100287227	-1460,-3708,-3198,-2360
chr20:30455741-30456373	chr20	+	30455815	30456243	True	NM_001012644,NM_177991,NM_001008409,NM_080611	chr20,chr20,chr20,chr20	-,-,+,-	DUSP15,DUSP15,TTLL9,DUSP15	1608,1818,2261,2286
chr7:150068238-150068560	chr7	+	150068268	150068536	True	NM_002889,NM_173680,NM_013400,NM_014374,NM_001099695,NM_001099696	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,+,+	RARRES2,ZNF775,REPIN1,REPIN1,REPIN1,REPIN1	-29505,7869,-2440,-61,-2440,-2440
chr1:150569481-150570159	chr1	+	150569560	150570146	True	NM_182763,NR_036211	chr1,chr1	-,+	MCL1,MIR4257	-17346,-45206
chr3:170076244-170076586	chr3	+	170076248	170076622	True	NM_001145098,NM_001145097,NM_024947,NM_005414	chr3,chr3,chr3,chr3	+,+,-,+	SKIL,SKIL,PHC3,SKIL	-826,788,-176711,-826
chr3:13588485-13590069	chr3	+	13588484	13589982	True	NM_001004019,NM_001998,NM_024923	chr3,chr3,chr3	+,+,-	FBLN2,FBLN2,NUP210	642,642,-126675
chr7:31003691-31004715	chr7	+	31003708	31004748	True	NM_001202481,NM_000823	chr7,chr7	-,+	CRHR2,GHRHR	-263989,-123
chr7:76091966-76092908	chr7	+	76092028	76092917	True	NM_020892,NR_003262,NM_001102594,NM_001102595	chr7,chr7,chr7,chr7	+,-,+,+	DTX2,FDPSL2A,DTX2,DTX2	-1107,11450,-1107,-1107
chr7:76091966-76092908	chr7	+	76590141	76591029	False	NR_023383,NM_006682	chr7,chr7	+,-	PMS2P11,FGL2	19109,238171
chr9:95149374-95150968	chr9	+	95149678	95150786	True	NM_001012267,NM_014057	chr9,chr9	+,-	CENPP,OGN	-61996,16210
chr7:98032398-98033219	chr7	+	98032513	98033099	True	NM_001159491,NM_018842	chr7,chr7	+,-	BRI3,BAIAP2L1	-121597,-2086
chr4:89075928-89076776	chr4	+	89076338	89076786	True	NM_000297,NM_004827	chr4,chr4	+,-	PKD2,ABCG2	-147590,3275
chr8:145029364-145030273	chr8	+	145029606	145029711	True	NM_201379,NM_201380,NM_000837	chr8,chr8,chr8	-,-,+	PLEC,PLEC,GRINA	-1518,-4562,34514
chr3:46249294-46251213	chr3	+	46249610	46251112	True	NM_001295,NM_001164680	chr3,chr3	-,+	CCR1,CCR3	72,32759
chr17:7156583-7156919	chr17	+	7156586	7156932	True	NM_015343,NM_001307,NM_203415,NM_203414,NM_203413,NM_001185023,NM_015362,NM_001143775,NM_001185022	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,+,+,-,+,-,-	CTDNEP1,CLDN7,C17orf81,C17orf81,C17orf81,CLDN7,C17orf81,CTDNEP1,CLDN7	-1327,9382,-1265,-1086,-1086,9382,-1086,-1591,9630
chr1:26127081-26127406	chr1	+	26127155	26127439	True	NM_206926,NM_020451,NR_024498	chr1,chr1,chr1	+,+,-	SEPN1,SEPN1,LOC646471	-539,-539,22708
chr14:91978639-91979299	chr14	+	91978942	91979016	True	NM_032560,NR_003709	chr14,chr14	-,+	SMEK1,SNORA11B	-2298,-386226
chr17:26903264-26903467	chr17	+	26903276	26903472	True	NM_003593,NM_005165,NM_033198	chr17,chr17,chr17	+,-,-	FOXN1,ALDOC,PIGS	-52368,529,-4389
chr14:20879071-20879375	chr14	+	20879269	20879407	True	NM_007110,NM_001641	chr14,chr14	-,+	TEP1,APEX1	2222,43882
chr3:183598280-183598694	chr3	+	183598528	183598599	True	NM_182537,NM_018622,NM_001037639	chr3,chr3,chr3	+,-,-	HTR3D,PARL,PARL	150732,4151,4151
chr9:32556086-32556973	chr9	+	32556110	32556671	True	NM_001195622,NM_005802,NR_033992,NR_033991	chr9,chr9,chr9,chr9	-,-,+,+	TOPORS,TOPORS,LOC100129250,LOC100129250	-3484,-3484,-4392,-5021
chr5:172088744-172089521	chr5	+	172088786	172089407	True	NM_001142651,NM_004417	chr5,chr5	+,-	NEURL1B,DUSP1	-20561,108855
chr15:45721796-45722092	chr15	+	45721838	45722081	True	NM_001482,NM_197955,NR_030599,NM_032413	chr15,chr15,chr15,chr15	-,+,+,+	GATM,C15orf48,MIR147B,C15orf48	-50858,681,3166,681
chr7:107114638-107115386	chr7	+	107114657	107115424	True	NM_005295,NM_006348	chr7,chr7	+,-	GPR22,COG5	-4207,89585
chr5:127418938-127419140	chr5	+	127419107	127419179	True	NR_015360,NM_001046	chr5,chr5	-,+	FLJ33630,SLC12A2	-341,303
chr11:134094163-134094427	chr11	+	134094176	134094346	True	NM_052875,NM_015261	chr11,chr11	+,-	VPS26B,NCAPD3	214,130
chr3:67705226-67705633	chr3	+	67705326	67705644	True	NM_001177599,NM_003848,NM_213609	chr3,chr3,chr3	-,-,+	SUCLG2,SUCLG2,FAM19A1	-288,-288,347809
chr11:130642901-130644406	chr11	+	130642919	130644453	True	NM_139055,NM_014758	chr11,chr11	+,-	ADAMTS15,SNX19	-324101,141981
chr18:14501845-14502486	chr18	+	14502079	14502521	True	NR_024076,NR_026756	chr18,chr18	-,+	CXADRP3,LOC284233	-3374,-164708
chr19:641007-641296	chr19	+	641115	641289	True	NM_005035,NM_020637	chr19,chr19	-,+	POLRMT,FGF22	-7547,-1240
chr3:63436688-63437882	chr3	+	63436811	63437921	True	NM_025075,NM_144642	chr3,chr3	-,+	THOC7,SYNPR	411726,-8122
chr11:18229110-18230640	chr11	+	18229304	18230622	True	NR_026564,NR_026541,NR_026563,NM_006512	chr11,chr11,chr11,chr11	+,+,+,-	LOC494141,LOC494141,LOC494141,SAA4	62,62,209,27812
chr1:117600534-117601634	chr1	+	117600908	117601496	True	NM_003594,NM_001145635	chr1,chr1	+,-	TTF2,TRIM45	1452,62975
chr19:55660868-55661143	chr19	+	55660874	55661158	True	NM_017729,NM_001126132,NM_001126133,NM_000363,NM_003283	chr19,chr19,chr19,chr19,chr19	+,-,-,-,-	EPS8L1,TNNT1,TNNT1,TNNI3,TNNT1	-69165,-268,-268,7992,-268
chr9:94869956-94871573	chr9	+	94870247	94871557	True	NR_015444,NM_006415,NM_178324	chr9,chr9,chr9	+,-,-	LOC100128076,SPTLC1,SPTLC1	23558,6183,6183
chr1:205326639-205327421	chr1	+	205326654	205327094	True	NM_014858,NM_018203	chr1,chr1	+,-	TMCC2,KLHDC8A	-129667,-615
chr16:716745-716956	chr16	+	716744	716932	True	NM_001005920,NM_003961,NM_138769	chr16,chr16,chr16	-,+,+	JMJD8,RHBDL1,RHOT2	17557,9142,1200
chr1:171461808-171462186	chr1	+	171461808	171461870	True	NM_000261,NM_015172	chr1,chr1	-,+	MYOC,PRRC2C	159953,-7193
chr4:71871314-71871562	chr4	+	71871501	71871572	True	NM_002092,NM_000788	chr4,chr4	-,+	GRSF1,DCK	-165874,-12292
chr3:169946595-169948112	chr3	+	169946595	169947861	True	NM_002740,NM_024947	chr3,chr3	+,-	PRKCI,PHC3	-6426,-47058
chr22:38435338-38435538	chr22	+	38435444	38435512	True	NM_013356,NM_001039583	chr22,chr22	-,+	SLC16A8,PICK1	43708,17749
chr9:106859536-106860973	chr9	+	106859803	106861019	True	NM_001001919,NM_006444,NM_001042551,NM_001042550	chr9,chr9,chr9,chr9	-,+,+,+	OR13C4,SMC2,SMC2,SMC2	428532,-3313,-3313,-3023
chrX:48769846-48770600	chrX	+	48769893	48770631	True	NM_005660,NM_006875,NM_001167992,NM_001032289,NM_001042498	chrX,chrX,chrX,chrX,chrX	-,-,+,-,-	SLC35A2,PIM2,PQBP1,SLC35A2,SLC35A2	-976,5832,-14169,-960,-658
chr16:24855626-24856023	chr16	+	24855629	24856067	True	NM_001006634,NM_052944	chr16,chr16	-,+	ARHGAP17,SLC5A11	170658,1484
chr10:72577229-72577841	chr10	+	72577366	72577852	True	NM_003901,NM_152710	chr10,chr10	+,-	SGPL1,C10orf27	-1715,-32209
chr8:145321737-145321949	chr8	+	145321742	145321926	True	NM_030974,NM_001008271,NM_001080514	chr8,chr8,chr8	-,+,+	SHARPIN,SCXA,SCXB	-162602,-276,-276
chr8:145321737-145321949	chr8	+	145490828	145491012	False	NM_001008271,NM_015201,NM_001080514	chr8,chr8,chr8	+,-,+	SCXA,BOP1,SCXB	-276,24158,-276
chr6:391662-391863	chr6	+	391709	391899	True	NM_148959,NM_002460,NM_001195286,NR_036585	chr6,chr6,chr6,chr6	-,+,+,+	HUS1B,IRF4,IRF4,IRF4	265115,-21,-21,-21
chr10:17164552-17166076	chr10	+	17164838	17166117	True	NM_001081,NM_003380	chr10,chr10	-,+	CUBN,VIM	5750,104140
chr10:71211858-71212319	chr10	+	71211930	71212368	True	NM_001057,NM_012339	chr10,chr10	-,+	TACR2,TSPAN15	-35256,-755
chr2:38365872-38367544	chr2	+	38366029	38367567	True	NR_027252,NM_000104	chr2,chr2	+,-	C2orf58,CYP1B1	-7840,-62706
chr5:173416280-173416615	chr5	+	173416290	173416596	True	NM_138369,NM_001144954	chr5,chr5	-,+	BOD1,C5orf47	-372624,-179
chr12:75601912-75602377	chr12	+	75601946	75602332	True	NM_153748,NM_152779,NM_139136,NM_139137	chr12,chr12,chr12,chr12	-,+,-,-	KCNC2,GLIPR1L1,KCNC2,KCNC2	1229,126130,1229,1229
chr3:89153847-89154566	chr3	+	89153852	89154604	True	NM_182644,NM_001195308,NM_005233	chr3,chr3,chr3	+,-,+	EPHA3,CGGBP1,EPHA3	2069,-954836,2069
chr4:140587328-140588285	chr4	+	140587509	140588164	True	NM_002413,NM_001204366,NM_001204367,NM_001204368,NM_030648	chr4,chr4,chr4,chr4,chr4	+,+,+,+,-	MGST2,MGST2,MGST2,MGST2,SETD7	-638,-638,-638,-638,-109932
chr7:122526945-122527435	chr7	+	122527117	122527461	True	NM_001009571,NM_001167940,NR_036484,NM_017954	chr7,chr7,chr7,chr7	-,-,+,-	CADPS2,CADPS2,LOC154860,CADPS2	-304,-304,-583456,-304
chr5:77945203-77945667	chr5	+	77945207	77945648	True	NM_004866,NM_005779	chr5,chr5	+,-	SCAMP1,LHFPL2	-288920,-559
chr7:73246042-73246554	chr7	+	73246094	73246592	True	NM_001305,NM_152559	chr7,chr7	+,-	CLDN4,WBSCR27	-952,10313
chr15:77923453-77923795	chr15	+	77923473	77923771	True	NM_018200,NM_032808	chr15,chr15	+,-	HMG20A,LINGO1	-210281,988
chr19:10307582-10309213	chr19	+	10307980	10308576	True	NM_001130823,NR_036206,NM_001379	chr19,chr19,chr19	-,+,-	DNMT1,MIR4322,DNMT1	-2225,32512,-2225
chr19:58013469-58015116	chr19	+	58013687	58014998	True	NM_001144068,NM_198542	chr19,chr19	-,+	ZNF772,ZNF773	-24749,-2429
chr17:81039331-81039654	chr17	+	81039412	81039524	True	NM_001009905,NM_001004431	chr17,chr17	-,+	B3GNTL1,METRNL	-29726,-1896
chr9:27006402-27006925	chr9	+	27006547	27006805	True	NM_025103,NM_022901	chr9,chr9	+,-	IFT74,LRRC19	-50227,-856
chr5:140043663-140044375	chr5	+	140043892	140044328	True	NM_017706,NM_194249	chr5,chr5	+,-	WDR55,DND1	55,8893
chr3:17732001-17733030	chr3	+	17732151	17733004	True	NM_001134381,NR_037465	chr3,chr3	-,+	TBC1D5,MIR3714	8559,-757521
chr10:15888881-15890353	chr10	+	15889142	15890360	True	NM_024948,NM_001001484	chr10,chr10	-,+	FAM188A,PTER	12212,588606
chr2:58481514-58482051	chr2	+	58481608	58482015	True	NM_001130481,NM_018062	chr2,chr2	+,-	VRK2,FANCL	-207821,-13093
chr1:169533405-169534817	chr1	+	169533462	169534759	True	NM_003666,NM_000130	chr1,chr1	+,-	BLZF1,F5	-196327,21061
chr5:95768206-95768616	chr5	+	95768225	95768590	True	NM_001190442,NM_001177875,NM_000439	chr5,chr5,chr5	+,-,-	CAST,PCSK1,PCSK1	229150,-362,446
chr6:42883811-42885001	chr6	+	42884224	42884894	True	NM_138296,NM_001008739	chr6,chr6	+,-	PTCRA,C6orf226	-549,-25670
chr12:108730245-108731277	chr12	+	108730403	108731130	True	NM_001142344,NM_004072,NM_007076,NM_001142343	chr12,chr12,chr12,chr12	-,-,+,-	CMKLR1,CMKLR1,FICD,CMKLR1	2021,2021,177920,2021
chr19:44537050-44538174	chr19	+	44537050	44537970	True	NM_001129996,NM_013360,NR_033341	chr19,chr19,chr19	+,+,-	ZNF222,ZNF222,LOC100379224	-7607,-7607,79417
chr1:161371591-161372069	chr1	+	161371639	161372105	True	NM_001013625,NM_003001	chr1,chr1	-,+	C1orf192,SDHC	-33975,-87524
chr2:39664694-39665067	chr2	+	39664743	39665095	True	NR_037875,NM_003618	chr2,chr2	+,-	LOC728730,MAP4K3	-237,-524
chr2:74429946-74430628	chr2	+	74429945	74430637	True	NR_027405,NM_018221,NM_006636	chr2,chr2,chr2	+,-,+	MTHFD2,MOBKL1B,MTHFD2	-4306,-23950,-4306
chr11:102477264-102477554	chr11	+	102477385	102477533	True	NM_001166,NM_004771	chr11,chr11	+,-	BIRC2,MMP20	-259471,18580
chr13:111800252-111801330	chr13	+	111800349	111801266	True	NM_017664,NM_003899	chr13,chr13	-,+	ANKRD10,ARHGEF7	-232933,4794
chr3:42306730-42306972	chr3	+	42306737	42306999	True	NM_014965,NM_001174138,NM_000729	chr3,chr3,chr3	+,-,-	TRAK1,CCK,CCK	-105127,-1298,713
chr13:42032140-42032422	chr13	+	42032257	42032345	True	NM_014059,NM_004294	chr13,chr13	+,-	C13orf15,MTRF1	-766,-194544
chr1:11869077-11870600	chr1	+	11869269	11870487	True	NM_001286,NM_005957,NM_021736,NM_021737,NM_021735	chr1,chr1,chr1,chr1,chr1	+,-,+,+,+	CLCN6,MTHFR,CLCN6,CLCN6,CLCN6	-3120,-3109,-3120,-3120,-3120
chr14:104553925-104554856	chr14	+	104554031	104554843	True	NM_004894,NM_001080464	chr14,chr14	-,+	C14orf2,ASPG	-166128,-2059
chr16:833900-834123	chr16	+	833906	834112	True	NM_001025190,NM_058192,NM_022092	chr16,chr16,chr16	-,-,+	MSLNL,RPUSD1,CHTF18	-980,4321,4509
chr19:10398796-10399014	chr19	+	10398799	10398861	True	NM_003259,NM_001544,NM_001039132,NM_022377,NM_001103167	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	ICAM5,ICAM4,ICAM4,ICAM4,ZGLP1	1793,-1202,-1202,-1202,21422
chr10:26877640-26879125	chr10	+	26877673	26879168	True	NM_001012750,NR_026793	chr10,chr10	-,+	ABI1,NCRNA00264	270898,-375
chr16:10914096-10914958	chr16	+	10914371	10915004	True	NM_000246,NM_001079512	chr16,chr16	+,-	CIITA,FAM18A	56050,-1750
chr4:106629981-106630194	chr4	+	106629988	106630210	True	NM_020395,NM_001031720,NM_024751,NM_001142471	chr4,chr4,chr4,chr4	-,+,+,-	INTS12,GSTCD,GSTCD,INTS12	-107,1759,-98,-107
chr5:176562094-176563753	chr5	+	176562220	176563420	True	NM_172349,NM_022455,NM_001199298	chr5,chr5,chr5	+,+,-	NSD1,NSD1,UIMC1	-2191,-1438,-128425
chr12:124252975-124254017	chr12	+	124252993	124254065	True	NM_207437,NM_001414	chr12,chr12	+,-	DNAH10,EIF2B1	-6003,-134670
chr18:56807366-56807606	chr18	+	56807421	56807635	True	NM_033280,NM_013435	chr18,chr18	+,-	SEC11C,RAX	-347,133040
chr12:54124710-54125634	chr12	+	54124811	54125531	True	NR_026554,NM_001143682,NM_020898,NM_017410	chr12,chr12,chr12,chr12	-,-,-,+	CALCOCO1,CALCOCO1,CALCOCO1,HOXC13	-3504,-3504,-3504,207044
chr16:24741475-24741728	chr16	+	24741483	24741761	True	NM_001006634,NM_014494	chr16,chr16	-,+	ARHGAP17,TNRC6A	284964,-485
chr12:69991353-69993326	chr12	+	69991407	69992735	True	NM_201550,NR_037475,NM_001198842	chr12,chr12,chr12	-,-,+	LRRC10,MIR3913-1,CCT2	12267,-12804,-12001
chr20:2489540-2489817	chr20	+	2489544	2489746	True	NM_024325,NM_080751	chr20,chr20	-,+	ZNF343,TMC2	82,27506
chr19:18901111-18901492	chr19	+	18901169	18901427	True	NM_000095,NM_002911	chr19,chr19	-,+	COMP,UPF1	737,41316
chr17:8661146-8661885	chr17	+	8661481	8661915	True	NM_004822,NM_001128076	chr17,chr17	+,-	NTN1,SPDYE4	262943,12
chr18:658306-658881	chr18	+	658349	658915	True	NM_001071,NM_001012716	chr18,chr18	+,-	TYMS,C18orf56	-796,-9
chr19:50831144-50831378	chr19	+	50831147	50831391	True	NM_004977,NM_007121	chr19,chr19	-,+	KCNC3,NR1H2	1293,48293
chr19:14584579-14584812	chr19	+	14584581	14584805	True	NM_000955,NM_001146693	chr19,chr19	-,+	PTGER1,LOC100130932	1419,14952
chr11:118402032-118402506	chr11	+	118402197	118402451	True	NM_001144038,NM_001144035,NM_001144034,NM_001144037,NM_001144036,NM_001080441,NM_001168618,NM_032780	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,+,-,+	TMEM25,TMEM25,TMEM25,TMEM25,TMEM25,TTC36,IFT46,TMEM25	-445,-445,-445,-445,-445,-4038,34390,-445
chr15:30486167-30487723	chr15	+	30486337	30487697	True	NR_026771,NM_139320	chr15,chr15	+,-	DKFZP434L187,CHRFAM7A	541,198224
chr15:30486167-30487723	chr15	-	32635393	32636735	False	NR_026859,NM_199357	chr15,chr15	-,+	FAM7A3,ARHGAP11A	90380,270955
chr20:1974644-1974959	chr20	+	1974835	1975007	True	NM_001190900,NM_001190892,NM_001040023,NM_024411,NM_001190898,NM_001190899	chr20,chr20,chr20,chr20,chr20,chr20	-,-,+,-,-,-	PDYN,PDYN,SIRPA,PDYN,PDYN,PDYN	-441,-1383,-99060,4,4,4
chr18:5196724-5197120	chr18	+	5196907	5197063	True	NM_001145194,NR_015389	chr18,chr18	-,+	LOC642597,LOC339290	242,41035
chr9:67793176-67793382	chr9	+	67793224	67793364	True	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	875,133396
chr9:67793176-67793382	chr9	-	44991056	44991196	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-871,-1360326
chr9:67793176-67793382	chr9	-	45727847	45727987	False	NM_001145196,NR_024060	chr9,chr9	-,+	FAM75A6,FAM27A	-2097117,-869
chr10:104676922-104677442	chr10	+	104676937	104677425	True	NM_199077,NM_017649,NM_000102,NM_199076	chr10,chr10,chr10,chr10	+,+,-,+	CNNM2,CNNM2,CYP17A1,CNNM2	688,688,-79647,688
chr6:167653734-167654702	chr6	+	167653738	167654736	True	NM_005299,NM_001143947	chr6,chr6	-,+	GPR31,UNC93A	-82419,50066
chr2:220254477-220254811	chr2	+	220254575	220254819	True	NM_012100,NM_001927	chr2,chr2	-,+	DNPEP,DES	-1913,28279
chr3:138455950-138457306	chr3	+	138456539	138456974	True	NM_018147,NM_006219	chr3,chr3	+,-	FAIM,PIK3CB	-128681,21274
chr2:87015651-87015909	chr2	+	87015798	87015954	True	NM_022780,NM_001768,NR_027353,NM_171827	chr2,chr2,chr2,chr2	+,-,-,-	RMND5A,CD8A,CD8A,CD8A	-68442,2933,2933,2933
chr19:7596845-7597309	chr19	+	7596852	7597282	True	NM_080662,NM_020533,NM_001166112,NM_001166113,NM_001166111,NM_006702,NM_001166114	chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,+,+,+,+,+,+	PEX11G,MCOLN1,PNPLA6,PNPLA6,PNPLA6,PNPLA6,PNPLA6	-42947,-9407,1845,2353,2308,1755,3306
chr17:8516528-8517728	chr17	+	8516777	8517504	True	NM_030808,NM_005964	chr17,chr17	+,-	NDEL1,MYH10	-177649,16589
chr6:41253792-41254431	chr6	+	41253887	41254479	True	NR_002794,NM_018643	chr6,chr6	+,-	TREML2P1,TREM1	-36823,28
chrX:107228058-107228842	chrX	+	107228091	107228875	True	NM_001170553,NM_031273	chrX,chrX	+,-	VSIG1,TEX13B	59324,-2491
chr19:3800346-3801016	chr19	+	3800656	3800802	True	NM_172251,NM_002378	chr19,chr19	+,-	MRPL54,MATK	-38049,1062
chr6:119254643-119255632	chr6	+	119254684	119255594	True	NM_153255,NM_017696,NM_014034	chr6,chr6,chr6	-,-,+	MCM9,MCM9,ASF1A	783,-1781,-39500
chr9:97137630-97138170	chr9	+	97137810	97137887	True	NM_017561,NM_032558	chr9,chr9	-,+	FAM22F,HIATL1	-46884,-1028
chr4:159637111-159637967	chr4	+	159637125	159637642	True	NM_005038,NM_004453	chr4,chr4	-,+	PPID,ETFDH	6967,-43899
chr19:41901024-41901486	chr19	+	41901039	41901511	True	NM_020158,NM_000709,NM_001164783	chr19,chr19,chr19	-,+,+	EXOSC5,BCKDHA,BCKDHA	1795,2182,2182
chr15:79302673-79303540	chr15	+	79302673	79303394	True	NM_153815,NM_206839	chr15,chr15	-,+	RASGRF1,MORF4L1	-4671,-137553
chr12:50506951-50507177	chr12	+	50506952	50507088	True	NM_032901,NM_147190,NM_005276	chr12,chr12,chr12	+,-,+	C12orf62,LASS5,GPD1	-1111,54069,-9210
chr12:130824645-130824919	chr12	+	130824670	130824864	True	NM_004764,NM_001190971,NM_015347	chr12,chr12,chr12	+,+,-	PIWIL1,PIWIL1,RIMBP2	-2288,-2288,177596
chr17:29652944-29653520	chr17	+	29653000	29653353	True	NM_001003927,NM_014210,NM_032932	chr17,chr17,chr17	-,-,+	EVI2A,EVI2A,RAB11FIP4	-4233,-4233,65288
chr3:33319282-33320853	chr3	+	33319646	33320695	True	NM_012157,NM_015551,NM_001171713	chr3,chr3,chr3	+,-,+	FBXL2,SUSD5,FBXL2	-764,-58939,-761
chr3:15135646-15136680	chr3	+	15135669	15136350	True	NM_022340,NM_014296	chr3,chr3	-,+	ZFYVE20,CAPN7	4364,111382
chr8:102379975-102381052	chr8	+	102380060	102381082	True	NM_016096,NR_002182	chr8,chr8	-,+	ZNF706,NACAP1	-162100,38
chr3:97689780-97690811	chr3	+	97689952	97690700	True	NM_032778,NM_001042533,NM_153182,NM_054106	chr3,chr3,chr3,chr3	-,-,-,+	MINA,MINA,MINA,OR5AC2	574,574,645,115316
chr9:99615191-99615410	chr9	+	99615243	99615380	True	NR_028350,NM_001001662	chr9,chr9	+,-	LOC441454,ZNF782	55976,1060
chr14:71061419-71062307	chr12	-	65813294	65813350	True	NM_007191,NM_001193461	chr12,chr12	-,+	WIF1,MSRB3	-297948,-140584
chr2:161052075-161052548	chr2	+	161052144	161052486	True	NM_000888,NM_022826	chr2,chr2	-,+	ITGB6,MARCH7	4159,-483185
chr7:135636360-135637429	chr7	+	135636644	135637438	True	NM_001130929,NM_001128619	chr7,chr7	+,-	PL-5283,LUZP6	-289487,24816
chr9:108365479-108366560	chr9	+	108365709	108366550	True	NM_006731,NM_005502	chr9,chr9	+,-	FKTN,ABCA1	-45362,-675182
chr5:10580883-10581564	chr5	+	10580946	10581580	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-16570,179857
chr2:172306460-172307148	chr2	+	172306541	172307188	True	NR_028482,NM_024770	chr2,chr2	+,-	DCAF17,METTL8	-15843,-15229
chr2:33659670-33660678	chr2	+	33659838	33660364	True	NM_015475,NM_170672	chr2,chr2	-,+	FAM98A,RASGRP3	164048,1051
chr1:1286659-1286880	chr1	+	1286855	1286925	True	NM_152228,NM_004421,NM_032348	chr1,chr1,chr1	+,-,-	TAS1R3,DVL1,MXRA8	-20180,-2363,7040
chr17:8246325-8247928	chr17	+	8246335	8247741	True	NR_024447,NM_153007	chr17,chr17	-,+	LOC100128288,ODF4	16180,-3210
chr19:51921015-51922567	chr19	+	51921298	51922198	True	NM_033130,NM_001171156,NM_001171157,NR_033235,NM_001171161,NM_001171160,NM_001171158,NM_001171159	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,+,-,-,-,-	SIGLEC10,SIGLEC10,SIGLEC10,LOC100129083,SIGLEC10,SIGLEC10,SIGLEC10,SIGLEC10	-241,-241,-241,-2199,-241,-241,-241,-241
chr4:15343876-15344274	chr4	+	15343920	15344216	True	NM_001135170,NM_001193534	chr4,chr4	+,-	C1QTNF7,FBXL5	-2411,312869
chr1:231376150-231376587	chr1	+	231376162	231376535	True	NM_152379,NM_014236	chr1,chr1	-,+	C1orf131,GNPAT	439,383
chr15:41804515-41804731	chr15	+	41804554	41804769	True	NM_002220,NM_206961,NM_002344,NM_001135685	chr15,chr15,chr15,chr15	+,-,-,-	ITPKA,LTK,LTK,LTK	-18483,1366,1366,1366
chr22:39717667-39718218	chr22	+	39718068	39718128	True	NM_001033853,NM_000967,NR_000028,NR_002439,NR_000026,NR_000027,NM_145731	chr22,chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,-,-,+	RPL3,RPL3,SNORD83B,SNORD43,RNU86,SNORD83A,SYNGR1	-2398,-2398,-8152,-2950,-5167,-6756,27825
chr6:111580959-111581272	chr6	+	111580968	111581109	True	NM_153369,NR_002932	chr6,chr6	+,-	KIAA1919,GSTM2P1	-537,-212211
chr16:86774559-86775000	chr16	+	86774671	86775016	True	NM_005250,NR_027490	chr16,chr16	+,-	FOXL1,MTHFSD	-162607,-185830
chr1:169862512-169862772	chr1	+	169862512	169862788	True	NM_020423,NM_018186,NM_181093	chr1,chr1,chr1	-,+,-	SCYL3,C1orf112,SCYL3	338,-98013,338
chr1:151346675-151347461	chr1	+	151346677	151347510	True	NM_002796,NM_003944	chr1,chr1	+,-	PSMB4,SELENBP1	24530,-1513
chr10:94597526-94598802	chr10	+	94597610	94598392	True	NM_004969,NM_001013848,NM_019053	chr10,chr10,chr10	-,+,+	IDE,EXOC6,EXOC6	-263758,-3193,9832
chr4:166034750-166035569	chr4	+	166035044	166035315	True	NM_001100389,NM_152620	chr4,chr4	-,+	TMEM192,TRIM60	-1020,-81944
chr7:102313501-102314539	chr7	+	102313909	102314303	True	NM_032959,NM_001166339	chr7,chr7	-,+	POLR2J2,SPDYE2L	-1727,-23188
chr7:102313501-102314539	chr7	+	44060624	44060960	False	NR_015401,NR_003655	chr7,chr7	+,-	FLJ35390,POLR2J4	17737,-1876
chr7:102313501-102314539	chr7	+	102214837	102215231	False	NM_001166339,NM_001097615	chr7,chr7	+,-	SPDYE2L,POLR2J3	-23209,-1769
chr5:7854302-7854799	chr5	+	7854311	7854558	True	NM_001089584,NM_002454	chr5,chr5	-,+	C5orf49,MTRR	-3047,14658
chr4:122099132-122099538	chr4	+	122099145	122099577	True	NM_024873,NR_024365	chr4,chr4	-,+	TNIP3,LOC100192379	-13669,586162
chr1:206786913-206787224	chr1	+	206787104	206787273	True	NM_006893,NM_001201478,NM_001004023	chr1,chr1,chr1	-,-,+	EIF2D,EIF2D,DYRK3	-1200,-1200,21607
chr13:31733533-31734956	chr13	+	31733677	31734982	True	NM_194318,NM_006644	chr13,chr13	+,-	B3GALTL,HSPH1	39129,1186
chr15:82557776-82559607	chr15	+	82557902	82558955	True	NM_024580,NM_001008226,NM_001040610	chr15,chr15,chr15	-,+,-	EFTUD1,FAM154B,EFTUD1	-2798,-2802,-2798
chr7:18579818-18580942	chr7	+	18580066	18580989	True	NM_001204148,NM_175886	chr7,chr7	+,-	HDAC9,PRPS1L1	-31224,-512580
chr6:149867780-149868165	chr6	+	149867978	149868072	True	NM_139126,NM_138785	chr6,chr6	-,+	PPIL4,C6orf72	-807,19455
chr1:48308880-48309933	chr1	+	48309039	48309922	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	152691,378434
chr7:150931306-150932289	chr7	+	150931432	150932276	True	NM_007189,NM_005692,NR_030407,NM_019015	chr7,chr7,chr7,chr7	-,-,+,+	ABCF2,ABCF2,MIR671,CHPF2	-7115,-7115,3230,-1898
chr19:7067378-7068780	chr19	+	7067810	7068795	True	NM_001044388,NM_024341,NM_001164425,NM_001044387	chr19,chr19,chr19,chr19	+,+,-,+	ZNF557,ZNF557,MBD3L3,ZNF557	675,675,-9165,675
chr13:98604932-98605223	chr13	+	98605020	98605098	True	NM_178861,NM_002271	chr13,chr13	-,+	RNF113B,IPO5	224487,830
chr15:81937538-81937939	chr15	+	81937607	81937989	True	NM_001080532,NM_004513	chr15,chr15	-,+	TMC3,IL16	-271189,-348408
chr1:179561578-179561952	chr1	+	179561600	179562003	True	NM_001199091,NM_001199085,NM_173533,NM_014625,NM_001199089	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	TDRD5,TDRD5,TDRD5,NPHS2,TDRD5	-909,-900,-900,-16516,-668
chr8:30584201-30584794	chr8	+	30584408	30584756	True	NM_001195103,NM_001195102,NM_000637,NM_005671,NM_001195104	chr8,chr8,chr8,chr8,chr8	-,-,-,+,-	GSR,GSR,GSR,UBXN8,GSR	780,780,780,16933,780
chr13:78120631-78120942	chr13	+	78120717	78120991	True	NM_144777,NR_037438	chr13,chr13	+,-	SCEL,MIR3665	-10967,151310
chr8:25315681-25315940	chr8	+	25315898	25315958	True	NM_017634,NM_152562	chr8,chr8	-,+	KCTD9,CDCA2	76,554
chr4:68567437-68569075	chr4	+	68567446	68568454	True	NR_015439,NM_018227	chr4,chr4	+,-	LOC550112,UBA6	-513,-557
chr5:71014471-71014947	chr5	+	71014492	71014936	True	NR_033968,NM_004291	chr5,chr5	-,+	LOC100049076,CARTPT	-459370,53
chr5:159627714-159629523	chr5	+	159627895	159629456	True	NM_001130864,NM_001040442	chr5,chr5	-,+	PWWP2A,FABP6	-81443,-1898
chr11:34918567-34919224	chr11	+	34918598	34919266	True	NM_015957,NM_001135024	chr11,chr11	-,+	APIP,PDHX	18723,18410
chr5:761201-761437	chr5	+	761246	761426	True	NM_001166260,NM_007030	chr5,chr5	+,-	TRIP13,TPPP	131542,-67736
chr5:38590080-38590928	chr5	+	38590079	38590931	True	NM_002310,NM_182801	chr5,chr5	-,+	LIFR,EGFLAM	4626,-144494
chr17:78007262-78008041	chr17	+	78007457	78007957	True	NM_017950,NM_019020	chr17,chr17	+,-	CCDC40,TBC1D16	2477,1750
chr19:48415064-48415919	chr19	+	48415456	48415553	True	NR_024219,NR_024220,NR_024217,NR_024216,NM_003167,NR_004437,NR_004436,NR_004435	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,-,+,+,+	SNAR-C5,SNAR-C1,SNAR-C2,SNAR-A13,SULT2A1,SNAR-A12,SNAR-A2,SNAR-A1	754,754,754,-4575,-25802,-4575,6132,6132
chr19:48415064-48415919	chr19	+	48452694	48452753	False	NR_024219,NR_024221,NR_024218,NR_024217,NR_024216,NR_024220,NR_004437,NM_001128326	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,+,+,-	SNAR-C5,SNAR-C3,SNAR-C4,SNAR-C2,SNAR-A13,SNAR-C1,SNAR-A12,BSPH1	6185,799,-9950,6185,-4569,6185,-4569,42725
chr19:48415064-48415919	chr19	+	48458082	48458179	False	NR_024219,NR_024220,NR_024221,NR_024217,NR_024216,NR_004437,NM_001128326	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,+,-	SNAR-C5,SNAR-C1,SNAR-C3,SNAR-C2,SNAR-A13,SNAR-A12,BSPH1	759,759,-4583,759,-9957,-9957,37300
chr19:48415064-48415919	chr19	+	48431224	48431321	False	NR_024219,NR_024220,NR_024223,NR_024224,NR_024225,NR_024226,NR_024227,NR_024228,NR_024229,NR_024215,NR_024214,NR_024217,NM_003167,NR_004436,NR_004435,NR_024242	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,+,+,+,+,+,+,+,-,+,+,+	SNAR-C5,SNAR-C1,SNAR-A5,SNAR-A7,SNAR-A11,SNAR-A9,SNAR-A6,SNAR-A8,SNAR-A10,SNAR-A4,SNAR-A3,SNAR-C2,SULT2A1,SNAR-A2,SNAR-A1,SNAR-A14	753,753,-4242,-4242,-4242,-4242,-4242,-4242,-4242,-4242,-4242,753,-41570,6116,6116,-4242
chr19:48415064-48415919	chr19	+	48441937	48442034	False	NR_024219,NR_024218,NR_024217,NR_024216,NR_024220,NM_003167,NR_004437,NR_004436,NR_004435	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,-,+,+,+	SNAR-C5,SNAR-C4,SNAR-C2,SNAR-A13,SNAR-C1,SULT2A1,SNAR-A12,SNAR-A2,SNAR-A1	-9916,763,-9916,6144,-9916,-52283,6144,-4553,-4553
chr8:27347370-27348345	chr8	+	27347594	27348142	True	NM_001979,NM_000742	chr8,chr8	+,-	EPHX2,CHRNA2	502,-10781
chr14:75528726-75529238	chr14	+	75529183	75529245	True	NM_203488,NM_001042430,NM_001107,NM_024643	chr14,chr14,chr14,chr14	-,+,-,+	ACYP1,FAM164C,ACYP1,FAM164C	1541,7053,1541,7053
chr1:212612905-212613906	chr1	+	212613264	212613924	True	NR_026598,NM_013349,NM_018252	chr1,chr1,chr1	+,+,-	NENF,NENF,TMEM206	-7094,-7094,-24997
chr16:775646-776396	chr16	+	775765	776395	True	NM_001031737,NM_023933,NM_032304	chr16,chr16,chr16	-,+,+	CCDC78,FAM173A,HAGHL	128,-4658,870
chr15:63669353-63669694	chr15	+	63669387	63669643	True	NM_206925,NM_001218,NM_031301	chr15,chr15,chr15	-,-,+	CA12,CA12,APH1B	4490,4490,-99689
chr1:17864231-17865623	chr1	+	17864660	17865667	True	NM_018125,NM_018715	chr1,chr1	+,-	ARHGEF10L,RCC2	662,-98440
chr22:20118321-20118561	chr22	+	20118346	20118610	True	NM_001185024,NM_013373,NM_182984	chr22,chr22,chr22	+,+,-	ZDHHC8,ZDHHC8,TRMT2A	753,753,-13578
chr21:46845799-46846110	chr21	+	46845799	46845887	True	NM_130445,NR_028082,NR_027498	chr21,chr21,chr21	+,-,-	COL18A1,NCRNA00175,NCRNA00175	-20753,-844,-814
chr19:44847563-44848070	chr19	+	44847566	44848106	True	NM_001083335,NM_181756	chr19,chr19	-,+	ZFP112,ZNF233	12800,-83541
chr12:116972925-116973210	chr12	+	116972932	116973100	True	NR_027346,NR_027345,NM_024738	chr12,chr12,chr12	+,+,-	NCRNA00173,NCRNA00173,C12orf49	-1749,-1762,202793
chr15:59061250-59061545	chr15	+	59061344	59061408	True	NM_001040450,NM_001110,NM_001040453	chr15,chr15,chr15	+,-,+	FAM63B,ADAM10,FAM63B	1984,-19167,1984
chr10:32922822-32923415	chr10	+	32922953	32923237	True	NM_024688,NM_025209	chr10,chr10	+,-	C10orf68,EPC1	-66364,-286840
chr20:4718999-4720520	chr20	+	4719114	4720054	True	NR_024267,NR_024268,NR_024269,NM_012409	chr20,chr20,chr20,chr20	-,-,-,+	PRNT,PRNT,PRNT,PRND	1310,1310,1310,-16610
chr1:26438305-26438571	chr1	+	26438363	26438457	True	NR_026685,NR_026686,NM_032588,NM_152835	chr1,chr1,chr1,chr1	+,+,-,+	PDIK1L,PDIK1L,TRIM63,PDIK1L	-758,-146,-44242,-146
chr5:60629801-60630228	chr5	+	60629853	60630245	True	NM_001048249,NM_020928	chr5,chr5	-,+	C5orf43,ZSWIM6	-171551,-1806
chr12:122716458-122716965	chr12	+	122716623	122716982	True	NM_030765,NR_024600,NM_138929,NM_019887,NR_024601	chr12,chr12,chr12,chr12,chr12	+,-,-,-,-	B3GNT4,DIABLO,DIABLO,DIABLO,DIABLO	-28451,-4555,-4555,-4555,-4555
chr19:7555037-7556314	chr19	+	7555050	7556017	True	NM_080662,NM_198534	chr19,chr19	-,+	PEX11G,C19orf45	-1145,6427
chr1:2162061-2162291	chr1	+	2162161	2162248	True	NM_001146310,NM_003036	chr1,chr1	-,+	C1orf86,SKI	-22989,-2089
chr12:133656540-133656823	chr12	+	133656549	133656867	True	NM_003440,NM_001164715	chr12,chr12	+,-	ZNF140,ZNF605	169,-123657
chr7:50633443-50635241	chr7	+	50633452	50635269	True	NM_000790,NM_001082971,NR_033845	chr7,chr7,chr7	-,-,+	DDC,DDC,LOC100129427	-4684,-298,-34046
chr10:101182060-101183380	chr10	+	101182158	101183398	True	NM_002079,NM_020348	chr10,chr10	-,+	GOT1,CNNM1	7182,-93358
chr1:228674756-228674979	chr1	+	228674811	228675025	True	NM_001010858,NM_033445	chr1,chr1	+,-	RNF187,HIST3H2A	42,-29251
chr16:1403683-1404441	chr16	+	1403794	1404296	True	NM_032520,NM_001001410	chr16,chr16	+,-	GNPTG,C16orf42	-1952,-1921
chr4:156691919-156693915	chr4	+	156691934	156693943	True	NM_017419,NM_000857	chr4,chr4	-,+	ACCN5,GUCY1B3	93533,-11867
chr5:138740011-138740825	chr5	+	138740083	138740716	True	NM_001033112,NM_194296,NM_001161546	chr5,chr5,chr5	+,-,-	PAIP2,SPATA24,LOC389333	-62000,-307,-9198
chr13:114312113-114312325	chr13	+	114312168	114312238	True	NM_000705,NM_002929	chr13,chr13	-,+	ATP4B,GRK1	325,9358
chr11:59241915-59242249	chr11	+	59241984	59242252	True	NM_001004705,NM_001001954	chr11,chr11	+,-	OR4D10,OR5A2	2650,-51558
chr11:55737043-55738590	chr11	+	55737043	55738494	True	NM_001005491,NM_001001921	chr11,chr11	-,+	OR10AG1,OR5AS1	-1104,59400
chr3:38965570-38966293	chr3	+	38965573	38965707	True	NM_020839,NM_014139	chr3,chr3	+,-	WDR48,SCN11A	127799,26395
chr6:84918866-84919251	chr6	+	84918870	84919046	True	NM_014895,NM_138409	chr6,chr6	-,+	KIAA1009,MRAP2	18349,-175501
chr12:122909481-122910560	chr12	+	122909645	122910422	True	NM_002956,NM_198240,NM_014708	chr12,chr12,chr12	-,-,+	CLIP1,CLIP1,KNTC1	-2529,-2529,101386
chr14:24584486-24584834	chr14	+	24584527	24584827	True	NM_016049,NM_001163484,NM_181357,NR_028100,NR_028099,NM_025230	chr14,chr14,chr14,chr14,chr14,chr14	-,+,+,+,+,+	FAM158A,DCAF11,DCAF11,DCAF11,DCAF11,DCAF11	26020,-672,-84,-86,-592,-592
chr4:48486314-48486520	chr4	+	48486501	48486569	True	NM_175619,NM_152679,NM_003215	chr4,chr4,chr4	+,+,-	ZAR1,SLC10A4,TEC	5739,-1192,-214687
chr14:103996766-103997247	chr14	+	103996924	103997288	True	NM_152307,NM_001823	chr14,chr14	+,-	TRMT61A,CKB	-1466,-7754
chr1:51433741-51434141	chr1	+	51433822	51434062	True	NM_001262,NM_007051,NM_078626	chr1,chr1,chr1	+,-,+	CDKN2C,FAF1,CDKN2C	304,-7886,1579
chr7:91567917-91569661	chr7	+	91568217	91569673	True	NM_006980,NM_147185,NM_005751	chr7,chr7,chr7	-,+,+	MTERF,AKAP9,AKAP9	-58201,515,515
chr7:149473274-149473581	chr7	+	149473297	149473473	True	NM_207336,NM_198455	chr7,chr7	-,+	ZNF467,SSPO	-3002,-217
chr16:66459773-66460311	chr16	+	66459861	66460245	True	NM_001172643,NM_001136106,NM_001197224,NM_001178020,NM_001197225	chr16,chr16,chr16,chr16,chr16	-,+,+,+,+	TK2,BEAN1,BEAN1,BEAN1,BEAN1	123999,570,570,570,570
chr5:154320523-154320804	chr5	+	154320594	154320795	True	NM_001014990,NM_015465,NM_014180	chr5,chr5,chr5	+,-,+	MRPL22,GEMIN5,MRPL22	-12,-2818,-12
chr14:24682914-24683913	chr14	+	24683024	24683846	True	NM_174944,NM_001199821,NM_001199822,NM_014169,NM_001184739,NM_138476	chr14,chr14,chr14,chr14,chr14,chr14	+,-,-,-,+,-	TSSK4,MDP1,MDP1,CHMP4A,TSSK4,MDP1	-8149,1480,1480,12,-8149,1480
chr19:52230473-52230773	chr19	+	52230595	52230665	True	NM_001523,NM_001005738	chr19,chr19	-,+	HAS1,FPR2	-3374,33787
chr19:1094752-1095079	chr19	+	1094842	1095030	True	NM_001039847,NM_002695,NM_002085,NM_001039848	chr19,chr19,chr19,chr19	+,-,+,+	GPX4,POLR2E,GPX4,GPX4	8905,411,8905,9618
chr5:76536979-76538587	chr5	+	76536985	76538334	True	NM_003719,NM_032367	chr5,chr5	+,-	PDE8B,ZBED3	-30331,-153955
chr2:18061204-18061762	chr2	+	18061304	18061797	True	NM_024624,NM_002252	chr2,chr2	-,+	SMC6,KCNS3	-126208,-1418
chrX:56287024-56287765	chrX	+	56287027	56287692	True	NM_001159296,NR_002308	chrX,chrX	+,-	KLF8,LOC442454	-28214,476382
chr14:55036005-55037028	chr14	+	55036027	55037016	True	NM_004124,NM_015589,NM_001161576	chr14,chr14,chr14	-,+,+	GMFB,SAMD4A,SAMD4A	-80283,-1449,-1449
chr11:62366817-62367686	chr11	+	62366907	62367679	True	NM_004739,NM_022830,NM_000327	chr11,chr11,chr11	-,-,+	MTA2,TUT1,ROM1	1674,-7798,12533
chr3:113673209-113675009	chr3	+	113673374	113674714	True	NM_173570,NM_020817	chr3,chr3	+,-	ZDHHC23,KIAA1407	-6685,100806
chr2:158693222-158694460	chr2	+	158693355	158694231	True	NM_001105,NM_001135098	chr2,chr2	-,+	ACVR1,UPP2	37448,157459
chrX:118371856-118372310	chrX	+	118371869	118372366	True	NM_006667,NM_020721	chrX,chrX	+,-	PGRMC1,KIAA1210	-1710,-87327
chr4:122718377-122720032	chr4	+	122718506	122719844	True	NM_005033,NM_001237,NM_001034194	chr4,chr4,chr4	+,-,+	EXOSC9,CCNA2,EXOSC9	2627,25301,2627
chr7:44796744-44796989	chr7	+	44796746	44796980	True	NM_174929,NM_031449,NM_138635	chr7,chr7,chr7	+,+,-	ZMIZ2,ZMIZ2,H2AFV	-1010,-8267,90795
chr1:36775199-36776668	chr1	+	36775317	36776294	True	NM_001162530,NM_024676,NM_018166	chr1,chr1,chr1	+,+,-	SH3D21,SH3D21,FAM176B	-3375,-2661,13512
chr11:111958214-111959129	chr11	+	111958264	111958870	True	NM_003002,NR_028383,NM_012459	chr11,chr11,chr11	+,-,-	SDHD,TIMM8B,TIMM8B	-751,-742,-742
chrX:148790799-148792471	chrX	+	148790997	148792084	True	NM_032508,NM_005366	chrX,chrX	-,+	TMEM185A,MAGEA11	-77510,1653
chr8:98289324-98289635	chr8	+	98289328	98289486	True	NM_033512,NM_178812	chr8,chr8	-,+	TSPYL5,MTDH	740,366920
chr3:109036948-109038147	chr3	+	109037153	109038057	True	NM_138815,NM_001145553	chr3,chr3	-,+	DPPA2,FLJ25363	-1789,90779
chr1:55446486-55446694	chr1	+	55446602	55446728	True	NM_014762,NM_182532	chr1,chr1	-,+	DHCR24,TMEM61	-93681,-188
chr7:75408941-75410206	chr7	+	75409022	75410156	True	NM_001040456,NM_006072	chr7,chr7	+,-	RHBDD2,CCL26	98160,8958
chr1:63940859-63941494	chr1	+	63940935	63941346	True	NM_032437,NM_014288	chr1,chr1	+,-	EFCAB7,ITGB3BP	47666,47544
chr10:5471491-5472496	chr10	+	5471513	5472245	True	NM_005863,NM_024803	chr10,chr10	+,-	NET1,TUBAL3	16300,-24720
chr17:6905932-6906633	chr17	+	6905983	6906611	True	NM_001004333,NM_000697,NR_037715,NR_037716,NR_037717,NR_029712	chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,-	RNASEK,ALOX12,RNASEK,RNASEK,RNASEK-C17ORF49,MIR195	9124,-6661,9124,9124,9124,14459
chr6:73933477-73934213	chr6	+	73933540	73934090	True	NM_001126063,NM_001017361	chr6,chr6	-,+	KHDC1L,C6orf221	1135,138309
chrX:1714950-1715162	chrY	+	1664999	1665207	False	NM_004043,NR_027383,NM_005088,NM_178129	chrY,chrY,chrY,chrY	+,+,+,-	ASMT,AKAP17A,AKAP17A,P2RY8	-702,-4564,-4564,-58962
chrX:1714950-1715162	chrX	+	1714999	1715207	True	NM_004043,NR_027383,NM_005088,NM_178129	chrX,chrX,chrX,chrX	+,+,+,-	ASMT,AKAP17A,AKAP17A,P2RY8	-702,-4564,-4564,-58962
chr7:100184525-100185016	chr7	+	100184676	100184874	True	NM_033506,NM_002319,NM_001163499,NM_012172	chr7,chr7,chr7,chr7	+,-,+,+	FBXO24,LRCH4,FBXO24,FBXO24	-771,-900,2321,2321
chr7:56229949-56231110	chr7	+	56230076	56230840	True	NM_015411,NM_001145712	chr7,chr7	+,-	SUMF2,LOC389493	-98210,-45986
chr17:38597451-38598082	chr17	+	38597460	38597900	True	NM_001552,NM_001067	chr17,chr17	+,-	IGFBP4,TOP2A	1775,-23258
chr16:57703306-57704300	chr16	+	57703346	57704294	True	NM_001130099,NM_170776	chr16,chr16	-,+	KIFC3,GPR97	127685,-1240
chr4:185220808-185221021	chr4	+	185220810	185220872	True	NM_152683,NM_153343	chr4,chr4	+,-	CCDC111,ENPP6	349894,-81696
chr4:25556278-25556609	chr4	+	25556305	25556656	True	NM_015187,NM_001177998	chr4,chr4	-,+	SEL1L3,SLC34A2	308005,100778
chr3:164910760-164911541	chr3	+	164910775	164911551	True	NM_001122752,NM_014926	chr3,chr3	+,-	SERPINI1,SLITRK3	2541880,2968
chr2:99282875-99284474	chr2	+	99283166	99283886	True	NM_001160154,NM_014044	chr2,chr2	-,+	MGAT4A,UNC50	-3230,-58183
chr17:37896072-37896418	chr17	+	37896079	37896297	True	NM_032339,NM_001030002,NM_005310	chr17,chr17,chr17	-,+,+	C17orf37,GRB7,GRB7	-9291,-1540,-1943
chr18:31245096-31246059	chr18	+	31245122	31246108	True	NM_030632,NM_198995	chr18,chr18	+,-	ASXL3,C18orf34	-86642,-224437
chr3:49839901-49840102	chr3	+	49839915	49840135	True	NM_001007540,NM_203370	chr3,chr3	-,+	CDHR4,C3orf54	-2661,551
chr6:26202361-26204072	chr6	+	26202367	26204008	True	NM_021065,NM_003545,NM_003530,NM_003522	chr6,chr6,chr6,chr6	-,+,-,+	HIST1H2AD,HIST1H4E,HIST1H3D,HIST1H2BF	-2896,864,-2903,-2631
chr11:119039860-119040068	chr11	+	119039868	119040086	True	NM_001145018,NM_170722,NM_024618	chr11,chr11,chr11	-,+,+	CCDC153,NLRX1,NLRX1	26548,-479,-479
chr7:119379619-119380278	chr7	+	119379786	119380322	True	NM_012281,NM_012338	chr7,chr7	+,-	KCND2,TSPAN12	533399,1117905
chr12:38716578-38718022	chr12	+	38716820	38717766	True	NM_001013620,NM_153634	chr12,chr12	+,-	ALG10B,CPNE8	-6322,581712
chr12:38716578-38718022	chr12	+	34182553	34182611	False	NM_198992,NM_032834	chr12,chr12	-,+	SYT10,ALG10	-589799,-7396
chr1:38274389-38274682	chr1	+	38274490	38274589	True	NM_001142726,NM_198446,NM_024640	chr1,chr1,chr1	+,+,-	C1orf122,C1orf122,YRDC	-1068,-1068,-625
chr16:89765286-89766251	chr16	+	89765668	89766300	True	NR_036480,NM_152339	chr16,chr16	+,-	LOC100128881,SPATA2L	11963,1871
chr8:94747487-94749284	chr8	+	94747600	94748987	True	NM_203390,NR_027259	chr8,chr8	-,+	RBM12B,C8orf39	4290,3351
chr5:178204367-178204609	chr5	+	178204366	178204624	True	NR_024035,NM_058230	chr5,chr5	-,+	AACSP1,ZNF354B	-1089,82329
chr11:92706319-92707927	chr11	+	92706323	92707214	True	NM_152313,NM_005959	chr11,chr11	-,+	SLC36A4,MTNR1B	223932,-3585
chr12:76471618-76472808	chr12	+	76471842	76472645	True	NM_004537,NM_139207,NM_006851	chr12,chr12,chr12	-,-,+	NAP1L1,NAP1L1,GLIPR1	6151,6151,-597380
chr20:45522309-45522985	chr20	+	45522355	45523019	True	NM_005244,NM_172110,NM_033550	chr20,chr20,chr20	+,+,-	EYA2,EYA2,TP53RK	243,243,-204079
chr17:55052054-55052350	chr17	+	55052199	55052398	True	NM_021626,NM_004645	chr17,chr17	+,-	SCPEP1,COIL	3069,-13788
chr1:214779001-214779405	chr1	+	214779002	214779116	True	NM_016343,NM_005401	chr1,chr1	+,-	CENPF,PTPN14	-2521,-53978
chr7:38725628-38726280	chr7	+	38725708	38726192	True	NR_028347,NM_001166018	chr7,chr7	-,+	FAM183B,POU6F2	547,291416
chr15:89632400-89632981	chr15	+	89632526	89633015	True	NM_007011,NM_152924,NM_000326	chr15,chr15,chr15	+,+,-	ABHD2,ABHD2,RLBP1	-1196,-1196,131964
chr5:171708356-171708944	chr5	+	171708531	171708980	True	NM_001171183,NM_152277	chr5,chr5	+,-	EFCAB9,UBTD2	-87406,1870
chr5:169660226-169660579	chr5	+	169660234	169660628	True	NM_001102609,NM_005565	chr5,chr5	+,-	C5orf58,LCP2	-341,64244
chr2:211454910-211456264	chr2	+	211454920	211456300	True	NM_001136575,NM_001122634	chr2,chr2	-,+	LANCL1,CPS1	-113421,1778
chr9:86595107-86595328	chr9	+	86595199	86595361	True	NM_002140,NM_031263,NM_031262,NM_024945	chr9,chr9,chr9,chr9	-,-,-,+	HNRNPK,HNRNPK,HNRNPK,RMI1	258,-15,258,275
chr16:81270957-81271162	chr16	+	81270975	81271209	True	NM_017429,NM_001076780	chr16,chr16	+,-	BCMO1,PKD1L2	1086,-17000
chr4:71570079-71570311	chr4	+	71570133	71570209	True	NM_144646,NM_001130709	chr4,chr4	-,+	IGJ,RUFY3	-37785,444
chr1:9972881-9973642	chr1	+	9972921	9973037	True	NM_022787,NM_001012329,NM_020248	chr1,chr1,chr1	+,-,-	NMNAT1,CTNNBIP1,CTNNBIP1	30448,-2605,-2605
chr10:126852619-126853156	chr10	+	126853014	126853132	True	NM_001083914,NM_001329,NM_017580	chr10,chr10,chr10	-,-,+	CTBP2,CTBP2,ZRANB1	-3390,-3911,-222374
chr7:36194768-36195445	chr7	+	36194836	36195414	True	NM_030636,NM_001199707	chr7,chr7	+,-	EEPD1,KIAA0895	-2051,211424
chr9:141107524-141108746	chr7	-	34787	35000	False	NM_002607,NM_020223	chr7,chr7	-,+	PDGFA,FAM20C	524690,157968
chr9:141107524-141108746	chr3	+	197880599	197880812	False	NR_003291	chr3	-	LOC348840	-73057
chr9:141107524-141108746	chr16	+	90169155	90169382	False	NM_001098173,NR_023348	chr16,chr16	-,+	PRDM7,GAS8	-26817,-80357
chr9:141107524-141108746	chr9	+	141107985	141108053	True	NM_032937	chr9	-	C9orf37	-594677
chr14:68282981-68283256	chr14	+	68282980	68283166	True	NM_133510,NM_015346,NM_133509,NM_002877	chr14,chr14,chr14,chr14	+,-,+,+	RAD51L1,ZFYVE26,RAD51L1,RAD51L1	3329,190,3329,3329
chr7:33087950-33088289	chr7	+	33087982	33088156	True	NM_016489,NM_001166118,NM_001033604	chr7,chr7,chr7	-,-,+	NT5C3,NT5C3,BBS9	-7460,-7461,80995
chr13:104144615-104146151	chr13	+	104144687	104145810	True	NR_026965,NM_000452	chr13,chr13	+,-	LOC121952,SLC10A2	-612296,-425491
chr2:34144461-34145274	chr2	+	34144575	34144995	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-405684,-191291
chr4:154282277-154282844	chr4	+	154282277	154282696	True	NM_032117,NR_001562	chr4,chr4	+,-	MND1,ANXA2P1	-16530,-52314
chr12:100966860-100967309	chr12	+	100966866	100967280	True	NM_174942,NM_152317	chr12,chr12	+,-	GAS2L3,DEPDC4	208,-306009
chr17:52978918-52979741	chr17	+	52978917	52979638	True	NM_005486,NR_027941	chr17,chr17	+,-	TOM1L1,COX11	-916,66479
chr3:49025823-49026171	chr3	+	49025914	49026065	True	NM_001009996,NM_177938,NM_177939	chr3,chr3,chr3	-,+,+	DALRD3,P4HTM,P4HTM	30009,1275,1275
chr3:45018053-45018493	chr3	+	45018059	45018285	True	NM_015004,NR_023353,NM_016598,NM_001135179	chr3,chr3,chr3,chr3	+,+,-,-	EXOSC7,EXOSC7,ZDHHC3,ZDHHC3	-369,-369,-385,-385
chr1:220959735-220960163	chr1	+	220959871	220960188	True	NM_022746,NM_012414	chr1,chr1	+,-	MOSC1,RAB3GAP2	-44,-514028
chr13:21633590-21634233	chr13	+	21633771	21634265	True	NM_014572,NM_005870	chr13,chr13	-,+	LATS2,SAP18	1507,80387
chr7:128207920-128208613	chr7	+	128207919	128208029	True	NM_183243,NR_024368	chr7,chr7	-,+	IMPDH1,FLJ45340	-157883,73265
chr7:128207920-128208613	chr17	+	60591379	60591451	False	NR_027486,NM_006852	chr17,chr17	-,+	TBC1D3P2,TLK2	-238363,-35058
chr15:44040530-44041450	chr15	+	44040727	44040942	True	NR_002318,NM_005313	chr15,chr15	-,+	CATSPER2P1,PDIA3	-2231,-2195
chr17:27531545-27531874	chr17	+	27531545	27531930	True	NM_203318,NM_005208	chr17,chr17	-,+	MYO18A,CRYBA1	-24138,41944
chr15:88116293-88116594	chr15	+	88116390	88116610	True	NM_001012338,NR_026869	chr15,chr15	-,+	NTRK3,NCRNA00052	683101,3549
chr6:158727444-158728726	chr6	+	158727623	158728434	True	NM_001007466,NM_020245,NM_032861	chr6,chr6,chr6	+,+,-	TULP4,TULP4,SERAC1	5257,5257,-138311
chr2:26372218-26373768	chr2	+	26372333	26373557	True	NM_000182,NM_001168241	chr2,chr2	-,+	HADHA,FAM59B	94087,22402
chr1:1292359-1292575	chr1	+	1292366	1292574	True	NM_152228,NM_004421,NM_032348	chr1,chr1,chr1	+,-,-	TAS1R3,DVL1,MXRA8	-25691,-7874,1391
chr20:43345414-43346875	chr20	+	43345435	43346903	True	NR_034104,NM_003881	chr20,chr20	-,+	LOC79015,WISP2	-45055,-1605
chr17:80023932-80024378	chr17	+	80024063	80024357	True	NM_212492,NM_022156	chr17,chr17	+,-	GPS1,DUS1L	-14351,-383
chr1:114696696-114697400	chr1	+	114696756	114697302	True	NM_205848,NM_020190	chr1,chr1	-,+	SYT6,OLFML3	-284,-174778
chr1:214453880-214454138	chr1	+	214453904	214454123	True	NM_020197,NM_005401	chr1,chr1	+,-	SMYD2,PTPN14	441,270951
chr11:111789704-111789968	chr11	+	111789703	111789909	True	NR_037651,NM_001885,NM_080659,NM_001541	chr11,chr11,chr11,chr11	+,-,+,+	HSPB2-C11ORF52,CRYAB,C11orf52,HSPB2	-6294,-7230,-153,-6294
chr8:144700605-144701035	chr8	+	144700852	144700980	True	NM_001082480,NM_003313,NM_023078	chr8,chr8,chr8	+,-,-	ZNF623,TSTA3,PYCRL	17392,-1120,-9068
chr1:27718267-27718510	chr1	+	27718272	27718492	True	NM_005281,NM_207397	chr1,chr1	+,-	GPR3,CD164L2	659,-8467
chr19:48616312-48616905	chr19	+	48616345	48616927	True	NM_001159323,NM_001159322,NM_022142,NM_003706	chr19,chr19,chr19,chr19	-,-,+,-	PLA2G4C,PLA2G4C,ELSPBP1,PLA2G4C	-2236,-2236,-118488,-2236
chr11:300123-300488	chr11	+	300141	300459	True	NM_006435,NM_001025295	chr11,chr11	+,-	IFITM2,IFITM5	7647,-615
chr16:56703835-56704109	chr16	+	56703868	56704134	True	NR_003669,NM_005950,NM_005951	chr16,chr16,chr16	+,-,+	MT1IP,MT1G,MT1H	5514,-1891,-193
chr22:37392947-37393772	chr22	+	37392952	37393811	True	NM_001013436,NM_001163857	chr22,chr22	+,-	MPST,C22orf33	21890,10116
chr5:132941630-132943516	chr5	+	132941685	132943295	True	NM_003202,NM_015082	chr5,chr5	+,-	TCF7,FSTL4	507106,4978
chr15:78564975-78566621	chr15	+	78565094	78566467	True	NM_001130182,NM_001130183,NM_018602,NM_025234	chr15,chr15,chr15,chr15	+,+,+,-	DNAJA4,DNAJA4,DNAJA4,WDR61	-8160,-6589,-8662,25523
chr8:91334190-91335769	chr8	+	91334194	91335815	True	NM_004929,NM_001359	chr8,chr8	-,+	CALB1,DECR1	-239087,-320665
chr5:41485833-41487796	chr5	+	41485842	41487093	True	NM_175921,NM_001005473	chr5,chr5	+,-	C5orf51,PLCXD3	417376,23692
chr2:60779862-60780481	chr2	+	60779962	60780497	True	NM_022894,NM_022893,NM_138559,NM_018014	chr2,chr2,chr2,chr2	+,-,-,-	PAPOLG,BCL11A,BCL11A,BCL11A	202867,186,186,186
chr19:3729498-3730283	chr19	+	3729792	3730252	True	NM_014428,NM_012398	chr19,chr19	+,-	TJP3,PIP5K1C	-1477,-29315
chr4:184583073-184583431	chr4	+	184583192	184583278	True	NM_199053,NM_152682,NM_021942	chr4,chr4,chr4	+,-,+	C4orf41,RWDD4,C4orf41	-2810,-2861,-2810
chr12:48166432-48166777	chr12	+	48166485	48166809	True	NM_001098531,NM_017842	chr12,chr12	-,+	RAPGEF3,SLC48A1	-13596,157
chrX:134654878-134655173	chrX	+	134654931	134655119	True	NM_007131,NM_182540	chrX,chrX	-,+	ZNF75D,DDX26B	-224966,-427
chr1:201251459-201251993	chr1	+	201251463	201251985	True	NM_000364,NM_000299,NM_001005337	chr1,chr1,chr1	-,+,+	TNNT2,PKP1,PKP1	94870,594,594
chr8:21949810-21951001	chr8	+	21950151	21951025	True	NM_024815,NM_022749	chr8,chr8	-,+	NUDT18,FAM160B2	15957,-3488
chr12:51237073-51237498	chr12	+	51237190	51237535	True	NM_182559,NM_001174130	chr12,chr12	+,-	TMPRSS12,SLC11A2	-547,165575
chr12:58240906-58241342	chr12	+	58240963	58241210	True	NM_005730,NM_001172697	chr12,chr12	-,+	CTDSP2,TSFM	-216,-64486
chr14:23776658-23776972	chr14	+	23776680	23776978	True	NM_001199864,NM_001199839,NM_004050,NR_026862	chr14,chr14,chr14,chr14	+,+,+,-	BCL2L2-PABPN1,BCL2L2,BCL2L2,PPP1R3E	-769,-671,-769,-4623
chr1:1948729-1949068	chr1	+	1948869	1949033	True	NM_000815,NM_001080484	chr1,chr1	+,-	GABRD,KIAA1751	1734,-13593
chr9:138393013-138393246	chr9	+	138393045	138393223	True	NM_016034,NM_001048265,NM_144654	chr9,chr9,chr9	+,-,-	MRPS2,C9orf116,C9orf116	-613,-1284,-1284
chr8:133803686-133805349	chr8	+	133803981	133805340	True	NM_016018,NM_144649	chr8,chr8	+,-	PHF20L1,TMEM71	-16436,-31067
chrX:148622289-148622601	chrX	+	148622386	148622584	True	NM_001171909,NM_001171907,NM_178124,NM_001171908,NR_027455	chrX,chrX,chrX,chrX,chrX	+,+,+,+,-	CXorf40A,CXorf40A,CXorf40A,CXorf40A,LOC100131434	3481,-20,-20,-20,-1074
chr4:103245543-103247438	chr4	+	103245584	103247369	True	NM_001135148,NM_001165412	chr4,chr4	-,+	SLC39A8,NFKB1	-115,175116
chr8:7973343-7973902	chr8	+	7973409	7973878	True	NR_031689,NR_024362	chr8,chr8	-,+	MIR548I3,FLJ10661	-26798,112213
chr8:7973343-7973902	chr8	-	7028648	7029116	False	NR_027000,NM_001164452	chr8,chr8	-,+	LOC349196,FAM90A14	91958,85309
chr15:35527322-35528643	chr15	+	35527329	35528565	True	NR_003144,NR_037507	chr15,chr15	+,-	LOC723972,MIR3942	961,136053
chr2:231788349-231789543	chr2	+	231788387	231789489	True	NM_030926,NM_005683	chr2,chr2	+,-	ITM2C,GPR55	-58817,502
chr11:75062837-75063198	chr11	+	75063061	75063159	True	NM_020251,NM_004041,NM_001005	chr11,chr11,chr11	-,-,+	ARRB1,ARRB1,RPS3	-186,-186,47402
chr8:95907230-95907437	chr8	+	95907292	95907458	True	NM_057749,NM_017864	chr8,chr8	-,+	CCNE2,INTS8	74,-71809
chr14:77925123-77926375	chr14	+	77925153	77926307	True	NM_012111,NM_022067,NM_001193314,NM_001193315,NM_001193316,NM_001193317	chr14,chr14,chr14,chr14,chr14,chr14	+,-,-,-,-,-	AHSA1,VIPAR,VIPAR,VIPAR,VIPAR,VIPAR	-831,-1170,-1170,-1170,-1170,-1170
chr17:43971942-43972152	chr17_ctg5_hap1	-	895482	895550	False	NM_016835,NM_016834,NM_005910,NR_024559,NM_001123067,NM_001123066,NM_016841,NR_024560,NM_001203251,NM_001203252	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	-,-,-,+,-,-,-,-,-,-	MAPT,MAPT,MAPT,LOC100128977,MAPT,MAPT,MAPT,LOC100130148,MAPT,MAPT	330,330,330,-839,330,330,330,-1058,330,330
chr17:43971942-43972152	chr17	+	43972006	43972096	True	NM_016835,NM_016834,NM_005910,NR_024559,NM_001123067,NM_001123066,NM_016841,NR_024560,NM_001203251,NM_001203252	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,-,+,+,+,+,+,+	MAPT,MAPT,MAPT,LOC100128977,MAPT,MAPT,MAPT,LOC100130148,MAPT,MAPT	-309,-309,-309,833,-309,-309,-309,1052,-309,-309
chr17:76182821-76183021	chr17	+	76182852	76182966	True	NM_001010982,NR_027083,NM_001145526,NM_003258	chr17,chr17,chr17,chr17	+,+,+,-	AFMID,AFMID,AFMID,TK1	431,431,431,369
chr11:133774018-133774899	chr11	+	133774121	133774883	True	NR_024344,NR_027276	chr11,chr11	-,+	LOC283174,LOC100128239	-2486,127283
chr17:17941740-17942213	chr17	+	17941834	17942154	True	NM_024052,NM_145691	chr17,chr17	+,-	C17orf39,ATPAF2	456,376
chr8:120642641-120643293	chr8	+	120642792	120643107	True	NM_006209,NM_002514,NM_001130863,NM_001040092	chr8,chr8,chr8,chr8	-,+,-,-	ENPP2,NOV,ENPP2,ENPP2	8052,-214298,8052,8052
chr12:108714210-108715970	chr12	+	108714285	108715999	True	NM_001142345,NM_014653	chr12,chr12	-,+	CMKLR1,WSCD2	154,-190825
chr19:7562349-7562891	chr19	+	7562359	7562726	True	NM_198534,NM_080662	chr19,chr19	+,-	C19orf45,PEX11G	35,-8454
chr19:18437689-18438878	chr19	+	18437690	18438122	True	NM_017712,NM_012321	chr19,chr19	+,-	PGPEP1,LSM4	13285,-3689
chr19:46502893-46503361	chr19	+	46503025	46503321	True	NM_001080402,NM_005091	chr19,chr19	+,-	CCDC61,PGLYRP1	-4737,23285
chr15:49101246-49102464	chr15	+	49101491	49102510	True	NM_014335,NM_014985,NM_001194998	chr15,chr15,chr15	+,-,-	EID1,CEP152,CEP152	67779,883,883
chr1:10531879-10532320	chr1	+	10531882	10532266	True	NM_213566,NM_004565,NM_004401	chr1,chr1,chr1	-,+,-	DFFA,PEX14,DFFA	397,2736,397
chr1:223193587-223193975	chr1	+	223193593	223193993	True	NM_032890,NM_003268	chr1,chr1	+,-	DISP1,TLR5	-205213,122685
chr10:102242627-102243117	chr10	+	102242685	102242963	True	NM_015490,NM_003393	chr10,chr10	-,+	SEC31B,WNT8B	36682,-19924
chr2:202686697-202687070	chr2	+	202686745	202687109	True	NM_001135745,NM_139158	chr2,chr2	-,+	ALS2,CDK15	-40850,-15598
chr4:100484271-100484667	chr4	+	100484285	100484705	True	NM_001134666,NM_001134665,NM_152292,NM_000253	chr4,chr4,chr4,chr4	-,-,-,+	RG9MTD2,RG9MTD2,RG9MTD2,MTTP	534,534,170,534
chr2:128403587-128403801	chr2	+	128403673	128403735	True	NM_005291,NR_027823,NM_001161416,NM_001161417,NM_001161415	chr2,chr2,chr2,chr2,chr2	+,-,+,+,+	GPR17,LIMS2,GPR17,GPR17,GPR17	-285,2068,-285,-285,-285
chr15:43804835-43805247	chr15	+	43804976	43805238	True	NM_002373,NM_005657	chr15,chr15	+,-	MAP1A,TP53BP1	4567,-2269
chr6:26681948-26682484	chr6	+	26682126	26682504	True	NM_013375,NM_024639	chr6,chr6	+,-	ABT1,ZNF322A	-84997,-22163
chr6:26681948-26682484	chr6	-	58187564	58188104	False	NM_000947,NR_003660	chr6,chr6	+,-	PRIM2,GUSBP4	-1005355,99670
chr22:22236966-22237767	chr22	+	22236996	22237077	True	NM_148176,NM_138957	chr22,chr22	+,-	PPIL2,MAPK1	-216778,-15026
chr11:105948360-105948598	chr11	+	105948385	105948637	True	NM_198439,NM_015423,NM_152433	chr11,chr11,chr11	-,+,-	KBTBD3,AASDHPPT,KBTBD3	36,-144,36
chr15:51968992-51970835	chr15	+	51969225	51970536	True	NM_013243,NM_015263,NM_001165257	chr15,chr15,chr15	+,-,+	SCG3,DMXL2,SCG3	3013,-54258,3013
chr15:50552511-50553997	chr15	+	50552688	50553695	True	NM_002112,NM_003645	chr15,chr15	-,+	HDC,SLC27A2	4524,-78359
chr1:55089458-55089722	chr1	+	55089475	55089705	True	NM_176782,NR_026782	chr1,chr1	-,+	FAM151A,HEATR8	-275,17721
chr14:24744969-24746943	chr14	+	24745146	24746770	True	NM_004581,NM_182836,NM_174913	chr14,chr14,chr14	-,-,+	RABGGTA,RABGGTA,C14orf21	-4403,-4343,22327
chrX:105991262-105992989	chrX	+	105991283	105992834	True	NM_194463,NM_001171706	chrX,chrX	+,-	RNF128,RIPPLY1	-21449,153784
chr19:18698823-18699116	chr19	+	18698849	18699079	True	NM_004750,NM_001100419,NM_001100418	chr19,chr19,chr19	-,+,+	CRLF1,C19orf60,C19orf60	18631,415,415
chr20:46608937-46609689	chr20	+	46608939	46609665	True	NR_026958,NM_198596	chr20,chr20	+,-	LOC284749,SULF2	378988,-193579
chr4:106629588-106629826	chr4	+	106629803	106629873	True	NM_024751,NM_001031720,NM_020395,NM_001142471	chr4,chr4,chr4,chr4	+,+,-,-	GSTCD,GSTCD,INTS12,INTS12	67,2096,58,58
chr11:62471311-62472986	chr11	+	62472281	62472849	True	NM_001130702,NR_037949,NR_037948,NM_001122955,NM_012202,NM_032667	chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,+,-	BSCL2,BSCL2,BSCL2,BSCL2,GNG3,BSCL2	988,4292,4292,2380,2264,988
chr2:33150129-33150446	chr2	+	33150297	33150495	True	NM_021209,NR_027097	chr2,chr2	-,+	NLRC4,LOC100271832	-659485,1698
chr16:16024669-16025272	chr16	+	16024811	16025162	True	NM_144600,NM_004996	chr16,chr16	-,+	FOPNL,ABCC1	-42364,18271
chr16:58128832-58129077	chr16	+	58128972	58129064	True	NM_013242,NM_002428	chr16,chr16	-,+	C16orf80,MMP15	34282,-69741
chr11:122525976-122526221	chr11	+	122525981	122526175	True	NM_032873,NM_001098169	chr11,chr11	+,-	UBASH3B,BSX	222,326262
chr12:56436398-56438218	chr12	+	56436411	56437843	True	NM_006928,NM_001029	chr12,chr12	-,+	PMEL,RPS26	-75915,-776
chr8:37458464-37459009	chr8	+	37458508	37458804	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	94496,146810
chr17:1926714-1927163	chr17	+	1926728	1927076	True	NM_178568,NM_001383	chr17,chr17	-,+	RTN4RL1,DPH1	1152,6354
chr20:34555629-34555954	chr20	+	34555930	34556002	True	NM_080834,NM_016558	chr20,chr20	+,-	C20orf152,SCAND1	526,-12649
chr21:33091457-33091731	chr21	+	33091684	33091754	True	NM_000454,NM_001145444	chr21,chr21	+,-	SOD1,SCAF4	-59807,12731
chr8:67582539-67583778	chr8	+	67582542	67583607	True	NM_019607,NM_001204173,NM_025054	chr8,chr8,chr8	+,+,-	C8orf44,C8orf44-SGK3,VCPIP1	-2806,-2806,-3090
chr5:131987886-131989503	chr5	+	131988015	131989543	True	NM_007054,NM_002188	chr5,chr5	-,+	KIF3A,IL13	83772,4321
chr20:48435118-48436689	chr20	+	48435401	48436723	True	NM_001135773,NM_015266	chr20,chr20	-,+	SPATA2,SLC9A8	93605,-6209
chrX:109661393-109661779	chrX	+	109661410	109661780	True	NM_020769,NM_001171689	chrX,chrX	+,-	RGAG1,AMMECR1	504,21731
chr15:91472715-91473289	chr15	+	91473109	91473297	True	NM_018671,NM_001039675,NM_198527	chr15,chr15,chr15	+,+,-	UNC45A,UNC45A,HDDC3	4917,112,2527
chr10:99051344-99052122	chr10	+	99051465	99052063	True	NR_037909,NM_005479,NM_032900,NM_001204300	chr10,chr10,chr10,chr10	-,+,-,-	ARHGAP19-SLIT1,FRAT1,ARHGAP19,ARHGAP19	417,26958,417,417
chrX:107683675-107684698	chrX	+	107683786	107684643	True	NM_033641,NM_033380,NM_000495,NM_001847	chrX,chrX,chrX,chrX	-,+,+,-	COL4A6,COL4A5,COL4A5,COL4A6	-2128,-683,-683,-1082
chr16:46868331-46869777	chr16	+	46868713	46869619	True	NM_133443,NM_001001436	chr16,chr16	+,-	GPT2,C16orf87	48688,-3639
chr16:84272778-84273838	chr16	+	84272788	84273728	True	NM_139174,NM_172347	chr16,chr16	+,-	ADAD2,KCNG4	-48117,-40
chr3:46041394-46042241	chr3	+	46041624	46042206	True	NM_024513,NM_006564	chr3,chr3	-,+	FYCO1,CXCR6	-4317,-56702
chr12:52279537-52281109	chr12	+	52279897	52281043	True	NM_182608,NM_001130015,NM_001013690	chr12,chr12,chr12	+,+,-	ANKRD33,ANKRD33,FIGNL2	749,749,-54196
chr7:100288694-100289266	chr7	+	100288890	100289214	True	NM_005837,NM_022574	chr7,chr7	+,-	POP7,GIGYF1	14461,-2020
chr19:31838788-31839358	chr19	+	31838803	31839377	True	NM_020856,NR_026894	chr19,chr19	-,+	TSHZ3,DKFZp566F0947	866,-198071
chr6:41169019-41169916	chr6	+	41169171	41169947	True	NM_024807,NM_198153	chr6,chr6	-,+	TREML2,TREML4	-246,26114
chr16:89985201-89985764	chr16	+	89985229	89985805	True	NM_002386,NM_145039,NM_001197181,NM_006086	chr16,chr16,chr16,chr16	+,-,+,+	MC1R,CENPBD1,TUBB3,TUBB3	-993,53485,2611,3881
chr16:87740317-87740554	chr16	+	87740322	87740576	True	NM_020655,NM_001184854	chr16,chr16	+,-	JPH3,KLHDC4	-103874,59072
chr22:35836972-35837902	chr22	+	35837063	35837901	True	NM_005368,NM_006739	chr22,chr22	-,+	MB,MCM5	175533,-40998
chr15:42264474-42264727	chr15	+	42264474	42264734	True	NM_139265,NM_001114633	chr15,chr15	-,+	EHD4,PLA2G4B	71,-133514
chr3:49758060-49759154	chr3	+	49758171	49759135	True	NM_013334,NM_198722,NM_021971,NM_022064	chr3,chr3,chr3,chr3	-,-,-,+	GMPPB,AMIGO3,GMPPB,RNF123	2299,-933,2299,-31232
chr2:27531424-27532094	chr2	+	27531428	27531914	True	NM_003353,NM_187841	chr2,chr2	-,+	UCN,TRIM54	-298,-26182
chr16:1875475-1875733	chr16	+	1875475	1875782	True	NM_005326,NM_001040427,NM_031208,NM_001142398,NM_001018104	chr16,chr16,chr16,chr16,chr16	-,-,+,+,+	HAGH,HAGH,FAHD1,FAHD1,FAHD1	1463,1463,1442,1442,1442
chr2:242717154-242717500	chr2	+	242717334	242717540	True	NM_005018,NM_022134	chr2,chr2	-,+	PDCD1,GAL3ST2	83568,-1145
chr2:113241464-113242135	chr2	+	113241466	113242186	True	NM_153712,NM_001164463	chr2,chr2	+,-	TTL,RGPD8	-1774,-50244
chr20:39319527-39319918	chr20	+	39319575	39319951	True	NM_003286,NM_005461	chr20,chr20	+,-	TOP1,MAFB	337510,-1699
chr7:11838840-11840029	chr7	+	11838893	11839841	True	NM_015204,NM_001134232	chr7,chr7	-,+	THSD7A,TMEM106B	32033,411006
chr11:62103251-62104802	chr11	+	62103500	62104741	True	NM_001083926,NM_206998,NM_025080	chr11,chr11,chr11	+,-,+	ASRGL1,SCGB1D4,ASRGL1	32,-36964,32
chr5:114601199-114601727	chr5	+	114601199	114601554	True	NM_005023,NM_001284	chr5,chr5	-,+	PGGT1B,AP3S1	-2630,576064
chr7:27309058-27309773	chr7	+	27309140	27309462	True	NM_001989,NM_000522	chr7,chr7	+,-	EVX1,HOXA13	-27027,-69415
chr10:4925105-4927015	chr10	+	4925168	4926914	True	NM_001040177,NR_026743	chr10,chr10	+,-	AKR1E2,tAKR	-56817,31601
chr9:128002089-128002944	chr9	+	128002290	128002977	True	NM_005347,NM_015635	chr9,chr9	-,+	HSPA5,GAPVD1	739,21133
chr11:122073064-122073553	chr11	+	122073070	122073438	True	NM_032873,NR_024430	chr11,chr11	+,-	UBASH3B,MIR100HG	452959,382
chr13:78493295-78493581	chr13	+	78493344	78493573	True	NM_001122659,NM_003991,NM_001201397,NM_144595	chr13,chr13,chr13,chr13	-,-,-,+	EDNRB,EDNRB,EDNRB,SLAIN1	-378,-378,380,-178100
chrX:21448365-21448927	chrX	+	21448565	21448953	True	NM_153270,NM_014927	chrX,chrX	-,+	KLHL34,CNKSR2	227545,-56091
chr2:183955589-183956501	chr2	+	183955667	183956273	True	NM_205842,NM_080876	chr2,chr2	-,+	NCKAP1,DUSP19	-52438,-12431
chr6:5273554-5274469	chr6	+	5274349	5274491	True	NM_006567,NM_001164840	chr6,chr6	+,-	FARS2,LYRM4	-12819,-13177
chr8:145635266-145636348	chr8	+	145635277	145636318	True	NR_031600,NM_130849,NM_017767,NM_174922,NM_013291	chr8,chr8,chr8,chr8,chr8	-,-,-,+,-	MIR1234,SLC39A4,SLC39A4,ADCK5,CPSF1	-9718,6012,5656,-37597,-544
chr13:46178915-46179185	chr13	+	46179063	46179189	True	NM_182542,NM_152719	chr13,chr13	-,+	FAM194B,SPERT	10735,97256
chr4:174257892-174259879	chr4	+	174257911	174259729	True	NM_003864,NM_001130689,NM_001130688,NM_002129	chr4,chr4,chr4,chr4	+,-,-,-	SAP30,HMGB2,HMGB2,HMGB2	32363,-2991,-2402,-2316
chr7:98797954-98798513	chr7	+	98797966	98798231	True	NM_001145715,NR_002147	chr7,chr7	-,+	KPNA7,MYH16	6913,72692
chrX:128914913-128915301	chrX	+	128914916	128915101	True	NM_001008222,NM_018990	chrX,chrX	-,+	ZDHHC9,SASH3	62511,-1075
chr22:41033059-41033594	chr22	+	41033170	41033551	True	NM_020831,NM_005297	chr22,chr22	-,+	MKL1,MCHR1	-480,41630
chr11:626054-626402	chr11	+	626117	626343	True	NM_031264,NM_021924,NM_001171968,NM_000797,NM_021920	chr11,chr11,chr11,chr11,chr11	-,-,-,+,-	CDHR5,CDHR5,CDHR5,DRD4,SCT	-1050,-1050,-1050,10961,880
chr4:89448926-89449971	chr4	+	89448950	89449986	True	NM_014606,NM_032906,NM_001042616	chr4,chr4,chr4	+,-,-	HERC3,PIGY,PIGY	63660,-3995,-3995
chr2:108446480-108447488	chr2	+	108446661	108447000	True	NM_182588,NR_024439	chr2,chr2	+,-	RGPD4,LOC729121	-3327,-4078
chr2:108446480-108447488	chr2	+	110552866	110552919	False	NM_178584,NM_001123363,NM_001037866,NM_032260,NM_005054	chr2,chr2,chr2,chr2,chr2	-,+,+,+,+	SEPT10,RGPD6,RGPD6,RGPD5,RGPD5	-181083,-2585,-2585,-2585,-954
chr2:108446480-108447488	chr2	-	111333742	111333795	False	NM_001142807,NM_001037866,NM_001123363,NM_032260,NM_005054	chr2,chr2,chr2,chr2,chr2	+,-,-,-,-	ACOXL,RGPD6,RGPD6,RGPD5,RGPD5	156354,2567,2567,2567,936
chr10:17270221-17270534	chr10	+	17270271	17270427	True	NM_003380,NM_004412	chr10,chr10	+,-	VIM,TRDMT1	-64,-26201
chr12:80070957-80072836	chr12	+	80071431	80072623	True	NR_031700,NM_002583	chr12,chr12	+,-	MIR1252,PAWR	-258446,12225
chr15:92395383-92396066	chr15	+	92395453	92395879	True	NM_013272,NM_001145044,NR_021493	chr15,chr15,chr15	+,+,-	SLCO3A1,SLCO3A1,LOC100144604	1058,1058,719664
chr19:56352057-56352948	chr19	+	56352125	56352819	True	NM_145007,NM_134444	chr19,chr19	-,+	NLRP11,NLRP4	-3997,-4232
chr4:40759100-40760230	chr4	+	40759330	40759922	True	NM_001166051,NM_024677	chr4,chr4	-,+	APBB2,NSUN7	99300,-7474
chr19:51530538-51531663	chr19	+	51530693	51531527	True	NM_145894,NM_145895,NM_145888,NM_002776,NM_001136032,NM_019598,NM_001077500,NM_001167605,NM_006853,NM_144947,NM_014441	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,-,-,-,+	KLK12,KLK12,KLK10,KLK10,KLK11,KLK12,KLK10,KLK11,KLK11,KLK11,SIGLEC9	6675,6675,-7739,-7411,-821,6675,-7262,7,7,-38,96609
chr11:65628831-65629503	chr11	+	65629001	65629416	True	NM_025128,NM_005507	chr11,chr11	+,-	MUS81,CFL1	-1187,-3197
chr1:237206719-237207084	chr1	+	237206719	237207131	True	NM_001035,NM_018072	chr1,chr1	+,-	RYR2,HEATR1	-1068,-438878
chr17:37308163-37309103	chr17	+	37308282	37309117	True	NM_020405,NM_000981	chr17,chr17	-,+	PLXDC1,RPL19	-380,47418
chr6:34664952-34665154	chr6	+	34665003	34665167	True	NM_022758,NM_024294,NM_003093	chr6,chr6,chr6	-,-,+	C6orf106,C6orf106,SNRPC	-378,-378,59703
chr6:165470071-165471147	chr6	+	165470338	165470948	True	NM_144980,NR_027284	chr6,chr6	-,+	C6orf118,LOC441177	252221,930090
chr12:72055384-72056303	chr12	+	72055556	72056171	True	NM_031435,NM_144982	chr12,chr12	+,-	THAP2,ZFC3H1	1505,1629
chr17:8054760-8055007	chr17	+	8054796	8055050	True	NM_002616,NR_037447	chr17,chr17	-,+	PER1,MIR3676	753,35442
chr14:74708901-74709213	chr14	+	74709053	74709255	True	NM_182894,NM_005050	chr14,chr14	+,-	VSX2,ABCD4	-2929,60562
chr1:25672572-25673365	chr1	+	25672683	25672979	True	NM_020485,NM_014313	chr1,chr1	-,+	RHCE,TMEM50A	74434,-7952
chr12:48213998-48214521	chr12	+	48214017	48214295	True	NM_015401,NM_017842,NM_001098416	chr12,chr12,chr12	-,+,-	HDAC7,SLC48A1,HDAC7	-254,-47101,-254
chr17:79141315-79142405	chr17	+	79141594	79142402	True	NR_027255,NM_001080395	chr17,chr17	+,-	LOC388428,AATK	-2338,-1722
chr1:209982508-209982860	chr1	+	209982720	209982818	True	NM_006147,NM_014388	chr1,chr1	-,+	IRF6,DIEXF	-3241,18493
chrX:30651054-30651567	chrX	+	30651122	30651352	True	NM_000167,NM_025159	chrX,chrX	+,-	GK,CXorf21	20123,-55089
chr8:104042051-104043630	chr8	+	104042291	104043564	True	NM_001695,NR_027071	chr8,chr8	+,-	ATP6V1C1,C8orf56	-9109,110068
chr9:138590328-138590926	chr9	+	138590380	138590884	True	NM_020822,NM_001012415,NM_001101677	chr9,chr9,chr9	+,-,-	KCNT1,SOHLH1,SOHLH1	3146,540,540
chr3:150688891-150690454	chr3	+	150689136	150690469	True	NR_024066,NM_174878,NM_001195794	chr3,chr3,chr3	+,-,-	CLRN1OS,CLRN1,CLRN1	-5,367,367
chr1:154129935-154130557	chr1	+	154130236	154130573	True	NM_001159484,NM_207308,NM_001127320	chr1,chr1,chr1	-,-,+	NUP210L,NUP210L,UBAP2L	-2644,-2644,62081
chr1:1445502-1445999	chr1	+	1445679	1445750	True	NM_001170536,NM_001170535,NM_018188,NM_001114748	chr1,chr1,chr1,chr1	+,+,+,-	ATAD3A,ATAD3A,ATAD3A,C1orf70	2159,1772,1772,30041
chr17:7239374-7240011	chr17	+	7239528	7239590	True	NM_001005408,NM_032442,NM_014716	chr17,chr17,chr17	-,-,+	NEURL4,NEURL4,ACAP1	-6890,-6890,257
chr15:89878802-89879180	chr15	+	89878905	89879157	True	NM_001126131,NR_029692,NM_002693	chr15,chr15,chr15	-,+,-	POLG,MIR9-3,POLG	-879,32090,-879
chr9:88513395-88514055	chr9	+	88513428	88514076	True	NM_015239,NM_024635	chr9,chr9	-,+	AGTPBP1,NAA35	-156484,41980
chr14:70075827-70076169	chr14	+	70076012	70076212	True	NR_024630,NM_014734	chr14,chr14	-,+	C14orf162,KIAA0247	-38094,2097
chr16:31491994-31492279	chr16	+	31491997	31492239	True	NM_022744,NM_015927,NM_003041,NM_001164719,NM_001042454	chr16,chr16,chr16,chr16,chr16	-,+,+,+,+	C16orf58,TGFB1I1,SLC5A2,TGFB1I1,TGFB1I1	27517,-7522,2199,-8519,-8572
chr4:154080611-154081961	chr4	+	154080872	154081541	True	NM_001130067,NR_001562	chr4,chr4	+,-	TRIM2,ANXA2P1	-6660,148473
chr1:150906552-150906753	chr1	+	150906591	150906678	True	NM_001145415,NM_022075,NR_026977,NM_012432	chr1,chr1,chr1,chr1	+,-,+,+	SETDB1,LASS2,SETDB1,SETDB1	-7836,40817,-7826,-7836
chr18:43544352-43544653	chr18	+	43544409	43544636	True	NM_213602,NM_020964	chr18,chr18	+,-	SIGLEC15,EPG5	-138930,2724
chr17:80418494-80419409	chr17	+	80418665	80419211	True	NR_036519,NM_012336,NM_001038618,NM_001193657,NR_036516,NM_001193653,NM_031968,NM_001033046,NM_001100408,NR_036514,NR_036517,NM_001193654,NM_001083608,NR_036518,NM_001100407	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,+,-,-,-,+,-,-,-,-,-,+,-,-	C17orf62,NARF,NARF,C17orf62,C17orf62,C17orf62,NARF,C17orf62,C17orf62,C17orf62,C17orf62,C17orf62,NARF,C17orf62,C17orf62	-9958,-2176,-2656,-9958,-9958,-9958,-2176,-9958,-9958,-9958,-9958,-9958,-2176,-9958,-9958
chrX:69669596-69669899	chrX	+	69669629	69669897	True	NM_020730,NM_016484,NM_021120,NM_001166278	chrX,chrX,chrX,chrX	+,-,+,+	DLG3,PDZD11,DLG3,DLG3	2257,-159831,-4975,5048
chr8:11664965-11665468	chr8	+	11664973	11665445	True	NM_004462,NM_001908	chr8,chr8	+,-	FDFT1,CTSB	-4837,60251
chr16:67383957-67384795	chr16	+	67383997	67384666	True	NM_001100915,NM_001161575	chr16,chr16	-,+	KCTD19,LRRC36	-23336,-2804
chr12:51591776-51592057	chr12	+	51591846	51592056	True	NM_002702,NM_001136264	chr12,chr12	-,+	POU6F1,DAZAP2	-44,40451
chr17:62502912-62503175	chr17	+	62502917	62503096	True	NM_138363,NM_007215,NM_004396	chr17,chr17,chr17	+,-,-	CCDC45,POLG2,DDX5	61,-9733,-433
chr1:165738303-165739293	chr1	+	165738393	165739123	True	NM_019026,NM_012474	chr1,chr1	-,+	TMCO1,UCK2	-258,57608
chr16:6837943-6838769	chr16	+	6838243	6838448	True	NM_201598,NM_001142334	chr16,chr16	-,+	FAM86A,RBFOX1	-1690454,-14484
chr19:10219031-10219283	chr19	+	10219033	10219173	True	NM_002566,NM_031917,NM_001198690,NR_003688,NR_004381,NM_001040664,NM_020230	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+,+	P2RY11,ANGPTL6,PPAN-P2RY11,SNORD105B,SNORD105,PPAN-P2RY11,PPAN	3023,-5608,-2185,1251,-757,-2185,-2185
chr16:8816057-8817012	chr16	+	8816375	8816805	True	NM_001127448,NM_000663,NM_015421	chr16,chr16,chr16	+,+,-	ABAT,ABAT,TMEM186	-1865,-9612,74750
chrX:154003002-154004079	chrX	+	154003012	154003950	True	NR_002984,NM_080612,NR_002969	chrX,chrX,chrX	+,-,+	SNORA56,GAB3,SNORA36A	-104,-23664,-6260
chr3:11607599-11609564	chr3	+	11608039	11609488	True	NM_006395,NM_001128221	chr3,chr3	+,-	ATG7,VGLL4	-294080,960
chr19:12901130-12901452	chr19	+	12901230	12901454	True	NM_002229,NM_005809	chr19,chr19	+,-	JUNB,PRDX2	855,11290
chr6:116441977-116442221	chr6	+	116442035	116442242	True	NM_152729,NM_000493	chr6,chr6	+,-	NT5DC1,COL10A1	-20087,5104
chr3:129079640-129080709	chr3	+	129079644	129079896	True	NR_002992,NR_026991	chr3,chr3	-,+	SNORA7B,C3orf47	36347,-44581
chr2:61244969-61245178	chr2	+	61244979	61245204	True	NM_144709,NM_002618	chr2,chr2	-,+	PUS10,PEX13	211,-218
chr15:93330975-93331941	chr15	+	93330987	93331500	True	NR_033769,NM_207446	chr15,chr15	+,-	ASB9P1,FAM174B	7213,-131956
chr14:95614694-95616540	chr14	+	95614740	95616277	True	NR_015415,NM_177438,NM_030621	chr14,chr14,chr14	+,-,-	FLJ45244,DICER1,DICER1	7747,7539,-6685
chr5:172412102-172413402	chr5	+	172412445	172413201	True	NR_026682,NM_003945	chr5,chr5	-,+	LOC100268168,ATP6V0E1	-26074,-1740
chr15:68118078-68118310	chr15	+	68118083	68118307	True	NM_001031807,NM_001031733	chr15,chr15	+,-	SKOR1,CALML4	-193,380191
chr4:4228619-4228898	chr4	+	4228671	4228889	True	NM_145291,NM_177998	chr4,chr4	+,-	ZBTB49,OTOP1	63034,-50
chr13:23709807-23711330	chr13	+	23710161	23711363	True	NM_000231,NR_033774	chr13,chr13	+,-	SGCG,BASP1P1	43696,-237841
chr1:35369440-35369915	chr1	+	35369487	35369855	True	NM_001080418,NM_002060	chr1,chr1	-,+	DLGAP3,GJA4	1179,-110939
chr10:104263678-104263937	chr10	+	104263712	104263800	True	NM_001178133,NM_005736,NM_016169	chr10,chr10,chr10	+,-,+	SUFU,ACTR1A,SUFU	-44,-1200,-44
chr2:70521982-70522389	chr2	+	70522011	70522106	True	NM_032822,NM_003096,NM_016297	chr2,chr2,chr2	-,-,+	FAM136A,SNRPG,PCYOX1	7165,-1142,-36831
chr9:133569827-133571338	chr9	+	133569838	133571232	True	NM_014285,NR_027440	chr9,chr9	+,-	EXOSC2,LOC100272217	-731,-114957
chr4:141672909-141674459	chr4	+	141673217	141674415	True	NM_015130,NM_153702	chr4,chr4	-,+	TBC1D9,ELMOD2	3112,-227956
chr9:2843223-2843498	chr9	+	2843222	2843540	True	NM_133497,NM_014878	chr9,chr9	+,-	KCNV2,KIAA0020	-125749,640
chr5:148742596-148743608	chr5	+	148742652	148743290	True	NM_024028,NM_014443	chr5,chr5	+,-	PCYOX1L,IL17B	-5135,15598
chr16:82662152-82662461	chr16	+	82662186	82662428	True	NM_005792,NM_001257	chr16,chr16	-,+	MPHOSPH6,CDH13	-458357,-1661
chr8:95732139-95732508	chr8	+	95732191	95732521	True	NM_181787,NR_034034	chr8,chr8	+,-	DPY19L4,LOC100288748	-139,-80496
chr11:6622221-6622722	chr11	+	6622295	6622759	True	NM_015324,NM_001014794,NM_001014795,NM_004517	chr11,chr11,chr11,chr11	-,+,+,+	RRP8,ILK,ILK,ILK	2102,2204,2447,2204
chr9:130185818-130186115	chr9	+	130185818	130186142	True	NM_007135,NR_002449	chr9,chr9	+,-	ZNF79,SNORA65	510,24824
chr10:101943009-101944294	chr10	+	101943252	101944211	True	NM_006459,NM_005063,NM_001100626	chr10,chr10,chr10	-,+,-	ERLIN1,SCD,ERLIN1	1580,162560,1660
chr11:63871597-63871853	chr11	+	63871614	63871884	True	NM_013280,NM_014067	chr11,chr11	+,-	FLRT1,MACROD1	-303,61751
chr8:86358423-86359982	chr8	+	86358535	86359794	True	NM_005181,NM_001738	chr8,chr8	+,-	CA3,CA1	-7530,-68193
chr1:109010175-109010604	chr1	+	109010177	109010615	True	NM_001102592,NM_001143988	chr1,chr1	-,+	HENMT1,NBPF6	193179,-17324
chr1:109010175-109010604	chr1	-	108768972	108769410	False	NM_001143987,NM_001143989	chr1,chr1	+,-	NBPF6,NBPF4	223493,17343
chr2:170370644-170371836	chr2	+	170370678	170371511	True	NM_006063,NM_024622	chr2,chr2	+,-	KBTBD10,FASTKD1	-4517,58973
chr1:43888175-43888539	chr1	+	43888236	43888326	True	NM_001190880,NM_015284	chr1,chr1	-,+	HYI,KIAA0467	31384,470
chr1:154245477-154246639	chr1	+	154245645	154246497	True	NM_001018837,NM_138740,NM_006118	chr1,chr1,chr1	+,-,+	HAX1,C1orf43,HAX1	-657,-52372,-657
chr9:79793301-79793510	chr9	+	79793337	79793551	True	NM_001018037,NR_026668,NM_033305,NM_015186,NM_001018038	chr9,chr9,chr9,chr9,chr9	+,-,+,+,+	VPS13A,LOC100286938,VPS13A,VPS13A,VPS13A	-1034,-504,-1034,-1034,-1034
chr8:54164440-54164811	chr8	+	54164537	54164788	True	NM_000912,NM_005285	chr8,chr8	-,+	OPRK1,NPBWR1	-343,-312134
chr9:141046364-141047428	chr9	+	141047004	141047069	True	NM_032937,NR_027156	chr9,chr9	-,+	C9orf37,TUBBP5	-533696,-2490
chr2:85840077-85840351	chr2	+	85840103	85840213	True	NM_006590,NM_001013649	chr2,chr2	+,-	USP39,C2orf68	3069,-924
chr19:39265813-39266525	chr19	+	39265867	39266395	True	NM_002307,NM_001042507	chr19,chr19	-,+	LGALS7,LGALS7B	-1710,13454
chr5:115299615-115299823	chr5	+	115299710	115299867	True	NR_033363,NM_173800	chr5,chr5	-,+	ATG12,AQPEP	-122162,-1621
chr11:47448141-47448392	chr11	+	47448272	47448440	True	NM_002804,NM_152264	chr11,chr11	-,+	PSMC3,SLC39A13	-248,-18277
chr15:66546978-66547366	chr15	+	66547152	66547382	True	NM_133375,NM_032445	chr15,chr15	+,-	DIS3L,MEGF11	38250,-1077
chr19:7462541-7463250	chr19	+	7462798	7463302	True	NR_024491,NM_015318	chr19,chr19	-,+	LOC100128573,ARHGEF18	75002,-2864
chr19:50015963-50016194	chr19	+	50015978	50016038	True	NM_004107,NM_001136019,NR_029703	chr19,chr19,chr19	+,+,-	FCGRT,FCGRT,MIR150	397,-493,-11853
chr22:30792535-30792990	chr22	+	30792659	30792811	True	NM_033382,NM_001204204,NM_001017981,NM_012429	chr22,chr22,chr22,chr22	+,+,-,+	SEC14L2,SEC14L2,RNF215,SEC14L2	118,118,-9357,118
chr9:28713155-28714011	chr9	+	28713307	28713786	True	NM_152570,NM_020124	chr9,chr9	-,+	LINGO2,IFNK	5574,-1189059
chr17:80329683-80329913	chr17	+	80329879	80329955	True	NM_003004,NM_018949	chr17,chr17	-,+	SECTM1,UTS2R	-37958,2245
chr21:37855999-37857102	chr21	+	37856002	37856969	True	NM_005441,NM_144492,NM_001146079	chr21,chr21,chr21	+,-,-	CHAF1B,CLDN14,CLDN14	-98364,-3614,-3614
chr10:23004127-23004551	chr10	+	23004133	23004586	True	NM_005028,NM_173081	chr10,chr10	-,+	PIP4K2A,ARMC3	-630,212367
chr3:168866904-168867270	chr3	+	168867091	168867297	True	NM_001163999,NR_030294,NM_001164000,NM_005241,NM_001105078,NM_001105077	chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-	MECOM,MIR551B,MECOM,MECOM,MECOM,MECOM	-2998,-597500,-1569,-2998,-2691,-2998
chr17:59941130-59941395	chr17	+	59941169	59941408	True	NM_032043,NM_018488	chr17,chr17	-,+	BRIP1,TBX4	-249,-407413
chr19:54605017-54605390	chr19	+	54605175	54605313	True	NM_133169,NM_130771,NM_206818,NM_004542,NM_133168	chr19,chr19,chr19,chr19,chr19	-,-,-,+,-	OSCAR,OSCAR,OSCAR,NDUFA3,OSCAR	-1027,-1027,-1027,846,-1027
chrX:30648885-30650851	chrX	+	30648904	30650211	True	NM_000167,NM_025159	chrX,chrX	+,-	GK,CXorf21	21264,-52871
chr22:25613577-25613946	chr22	+	25613595	25613945	True	NM_182492,NM_000496	chr22,chr22	-,+	LRP5L,CRYBB2	144629,1666
chr1:145072511-145073264	chr1	+	145072522	145073129	True	NM_004892,NM_022359	chr1,chr1	+,-	SEC22B,PDE4DIP	23277,3114
chr1:151171943-151173396	chr1	+	151172102	151173021	True	NM_001135637,NM_001135636,NM_003557,NM_005997,NM_001135638	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	PIP5K1A,PIP5K1A,PIP5K1A,VPS72,PIP5K1A	-1134,-1134,-1134,-9462,-1134
chr22:24321615-24322011	chr22	+	24321775	24321991	True	NM_001355,NM_000854,NM_001084392	chr22,chr22,chr22	-,+,-	DDT,GSTT2,DDT	78,322,-5095
chr22:24321615-24322011	chr22	-	24303715	24303931	False	NM_001080843,NM_000854,NM_001084393	chr22,chr22,chr22	-,-,+	GSTT2B,GSTT2,DDTL	-347,-322,5094
chr1:33841726-33842251	chr1	+	33841984	33842252	True	NM_145238,NM_198040	chr1,chr1	+,-	ZSCAN20,PHC2	95979,-790
chr1:151298748-151299609	chr1	+	151298867	151299461	True	NM_002651,NM_001198775,NM_001198774,NM_001198773,NM_020832	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	PI4KB,PI4KB,PI4KB,PI4KB,ZNF687	722,722,780,722,-44128
chrX:151921908-151922230	chrX	+	151922057	151922165	True	NM_001129826,NM_004909,NM_005361,NM_175742,NM_001129828,NM_175743,NM_153488,NM_001080848	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,-,-,+,-,-,+	CSAG3,CSAG2,MAGEA2,MAGEA2,CSAG3,MAGEA2,MAGEA2B,CSAG2	5645,5568,249,249,5568,249,-1958,5568
chrX:151921908-151922230	chrX	+	151902849	151902899	False	NM_001166387,NM_001166386,NM_001102576,NM_005367,NM_153478	chrX,chrX,chrX,chrX,chrX	-,-,+,-,+	MAGEA12,MAGEA12,CSAG1,MAGEA12,CSAG1	335,252,328,335,328
chrX:151921908-151922230	chrX	-	151883317	151883425	False	NM_001129826,NM_004909,NM_005361,NM_175742,NM_001129828,NM_175743,NM_153488,NM_001080848	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,+,+,-,+,+,-	CSAG3,CSAG2,MAGEA2,MAGEA2,CSAG3,MAGEA2,MAGEA2B,CSAG2	-5647,-5570,-249,-249,-5570,-249,1958,-5570
chr2:150439622-150441411	chr2	+	150439974	150441269	True	NM_015702,NM_194317	chr2,chr2	-,+	MMADHC,LYPD6	3118,-253002
chr6:135807947-135809411	chr6	+	135808431	135809439	True	NM_001134832,NM_001134830,NM_001134831,NM_017651,NR_026805	chr6,chr6,chr6,chr6,chr6	-,-,-,-,+	AHI1,AHI1,AHI1,AHI1,NCRNA00271	9516,9516,9516,9516,9499
chr1:213018851-213020324	chr1	+	213018864	213020224	True	NM_001024601,NM_014053	chr1,chr1	-,+	C1orf227,FLVCR1	822,11372
chr3:9792452-9793181	chr3	+	9792499	9793118	True	NM_016826,NM_016827,NM_016820,NM_016821,NM_016828,NM_016829,NM_016819,NM_003656,NM_002542	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,+,+,+,-,+	OGG1,OGG1,OGG1,OGG1,OGG1,OGG1,OGG1,CAMK1,OGG1	-930,-930,-930,-930,-930,-930,-930,18607,-930
chr19:57966398-57968314	chr19	+	57966654	57968154	True	NM_020633,NM_001023561	chr19,chr19	-,+	VN1R1,ZNF749	10,-20012
chr16:50323872-50324288	chr16	+	50323926	50324284	True	NM_001114,NM_001173984	chr16,chr16	+,-	ADCY7,BRD7	-2154,78611
chr3:48473092-48473394	chr3	+	48473149	48473431	True	NM_024661,NM_001130082,NM_015933,NM_002673	chr3,chr3,chr3,chr3	-,-,+,-	CCDC51,PLXNB1,CCDC72,PLXNB1	8148,-1689,8254,-2277
chr19:18211094-18211695	chr19	+	18211356	18211726	True	NM_015016,NM_153701	chr19,chr19	+,-	MAST3,IL12RB1	-2812,-13659
chr16:85344585-85345135	chr16	+	85344600	85345056	True	NR_033984,NM_198491	chr16,chr16	+,-	LOC400548,FAM92B	-173895,-198486
chr9:95710745-95712163	chr9	+	95710777	95711871	True	NM_001083536,NM_031486	chr9,chr9	+,-	FGD3,ZNF484	-1227,-70487
chr17:79478247-79478466	chr17	+	79478247	79478467	True	NM_001077182,NM_001199954,NM_001614,NR_037688	chr17,chr17,chr17,chr17	+,-,-,-	FSCN2,ACTG1,ACTG1,ACTG1	16949,1475,1475,1475
chr3:69128482-69129016	chr3	+	69128538	69128903	True	NM_006407,NM_003968,NM_198195	chr3,chr3,chr3	+,-,-	ARL6IP5,UBA3,UBA3	5186,676,676
chr17:8762345-8764144	chr17	+	8762414	8764052	True	NM_004822,NM_001010855	chr17,chr17	+,-	NTN1,PIK3R6	160806,6992
chr16:84734084-84735753	chr16	+	84734284	84735456	True	NM_005153,NM_021149	chr16,chr16	+,-	USP10,COTL1	-782,-82615
chr1:36917074-36917608	chr1	+	36917113	36917453	True	NM_145047,NM_024676,NM_206837	chr1,chr1,chr1	-,+,-	OSCP1,SH3D21,OSCP1	-1027,-144464,-1027
chr21:37914017-37914421	chr21	+	37914053	37914273	True	NM_005441,NM_001146078	chr21,chr21	+,-	CHAF1B,CLDN14	-156421,675
chr7:73146676-73147123	chr7	+	73147047	73147133	True	NM_148912,NM_148913,NR_026910,NR_026912,NR_026690,NM_001145364	chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,+,-	ABHD11,ABHD11,ABHD11,ABHD11,WBSCR26,ABHD11	6101,6101,6101,6107,2265,6101
chr19:11406112-11407434	chr19	+	11406158	11407436	True	NM_020812,NM_012466	chr19,chr19	-,+	DOCK6,TSPAN16	-33001,211
chr7:75716889-75718134	chr7	+	75716973	75718175	True	NM_005918,NM_016086	chr7,chr7	+,-	MDH2,STYXL1	-39633,-39652
chrX:153747561-153748480	chrX	+	153747719	153748315	True	NM_001171134,NM_021806,NM_001171132,NM_001171133,NM_001099856,NR_033237	chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,+,-	FAM3A,FAM3A,FAM3A,FAM3A,IKBKG,FAM3A	-3153,-3153,-3153,-3153,22143,-3153
chr5:133706551-133706862	chr5	+	133706573	133706841	True	NM_016508,NM_003337,NM_001113575	chr5,chr5,chr5	-,+,-	CDKL3,UBE2B,CDKL3	-3808,28,-3808
chr5:175136590-175138244	chr5	+	175136681	175138224	True	NM_022304,NM_032361	chr5,chr5	+,-	HRH2,THOC3	-28268,257378
chr7:22894081-22894301	chr7	+	22894192	22894294	True	NM_019059,NR_003075	chr7,chr7	-,+	TOMM7,SNORD93	-31771,1937
chr2:18765376-18765749	chr2	+	18765381	18765575	True	NM_033253,NM_002252,NM_001199088,NM_001002006,NM_001199086,NM_001199087,NM_001199104,NM_001199103	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	-,+,-,-,-,-,-,-	NT5C1B,KCNS3,NT5C1B,NT5C1B,NT5C1B,NT5C1B,NT5C1B-RDH14,NT5C1B-RDH14	5321,-705487,5321,5321,5321,5321,5321,5321
chr5:158525436-158525999	chr5	+	158525703	158526055	True	NM_024007,NM_145049	chr5,chr5	-,+	EBF1,UBLCP1	790,164033
chr11:40314678-40314907	chr11	+	40314695	40314832	True	NM_020929,NM_001142930	chr11,chr11	-,+	LRRC4C,API5	882,3018672
chr12:16758632-16759308	chr12	+	16758651	16759196	True	NM_018640,NM_001001395,NM_145764	chr12,chr12,chr12	-,-,+	LMO3,LMO3,MGST1	285,1878,-252358
chr4:183832580-183834376	chr4	+	183832821	183834401	True	NR_003612,NM_001921,NM_001012732	chr4,chr4,chr4	+,-,-	FAM92A3,DCTD,DCTD	124416,4279,4279
chrY:1405985-1406241	chrY	+	1405995	1406225	True	NM_001636,NM_002183	chrY,chrY	-,+	SLC25A6,IL3RA	54864,-537
chrY:1405985-1406241	chrX	+	1455995	1456225	False	NM_001636,NM_002183	chrX,chrX	-,+	SLC25A6,IL3RA	54864,-537
chr16:30720261-30720856	chr16	+	30720597	30720879	True	NR_002966,NM_001014979	chr16,chr16	+,-	SNORA30,C16orf93	978,52736
chr20:1304134-1305661	chr20	+	1304288	1305555	True	NM_015685,NM_014723,NM_001199784,NM_080489	chr20,chr20,chr20,chr20	-,+,-,-	SDCBP2,SNPH,SDCBP2,SDCBP2	-9971,-57379,1009,4375
chr4:10040372-10041621	chr4	+	10040392	10041488	True	NM_000798,NM_001001290	chr4,chr4	+,-	DRD5,SLC2A9	-257185,442
chr4:139481946-139482333	chr4	+	139482022	139482372	True	NM_012118,NM_014331	chr4,chr4	+,-	CCRN4L,SLC7A11	454570,-318519
chr1:110090978-110091183	chr1	+	110090991	110091229	True	NM_006496,NM_031936,NM_020703	chr1,chr1,chr1	+,+,-	GNAI3,GPR61,AMIGO1	24,-8548,-38655
chrX:51928597-51928920	chrX	+	51928697	51928783	True	NM_001098800,NM_177537,NM_177535,NR_003712,NM_030801,NR_003711	chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,-,+,+	MAGED4,MAGED4B,MAGED4B,SNORA11E,MAGED4B,SNORA11D	-740,-829,-829,5111,-829,4934
chrX:51928597-51928920	chrX	-	51811503	51811589	False	NM_001098800,NM_177537,NM_177535,NR_003712,NM_030801,NR_003711	chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,+,-,-	MAGED4,MAGED4B,MAGED4B,SNORA11E,MAGED4B,SNORA11D	740,829,829,-5111,829,-4934
chr11:59833003-59834549	chr11	+	59833080	59834585	True	NM_006138,NM_001031809,NM_001031666,NM_152851	chr11,chr11,chr11,chr11	+,+,+,-	MS4A3,MS4A3,MS4A3,MS4A6A	-9030,-9030,-9030,116140
chr3:50712786-50712992	chr3	+	50712970	50713040	True	NM_145071,NM_004947	chr3,chr3	-,+	CISH,DOCK3	-63708,-349
chr1:77748369-77748601	chr1	+	77748412	77748596	True	NM_174858,NM_012093,NM_005482	chr1,chr1,chr1	+,+,-	AK5,AK5,PIGK	-801,-176,-63280
chrX:27998104-27998491	chrX	+	27998204	27998534	True	NM_182506,NM_001017930	chrX,chrX	+,-	MAGEB10,DCAF8L1	-172148,1082
chr17:45095154-45096004	chr17	+	45095812	45095898	True	NM_203400,NM_054022	chr17,chr17	-,+	RPRML,GOSR2	-39198,-95377
chr11:86669799-86671162	chr11	+	86669959	86671195	True	NM_012193,NM_001168724	chr11,chr11	-,+	FZD4,TMEM135	-3526,77690
chr11:102163401-102163932	chr11	+	102163421	102163863	True	NM_001165,NM_052932	chr11,chr11	+,-	BIRC3,TMEM123	24330,159980
chr7:140097622-140097908	chr7	+	140097662	140097902	True	NM_207113,NM_032295,NM_001008749	chr7,chr7,chr7	-,-,+	SLC37A3,SLC37A3,RAB19	459,459,5940
chrX:40122414-40123137	chrX	+	40122501	40123132	True	NM_001123384,NM_005765	chrX,chrX	-,+	BCOR,ATP6AP2	-85919,317083
chr18:21718362-21718864	chr18	+	21718420	21718837	True	NM_012189,NM_138643,NM_018030,NM_138644,NM_153770,NM_153769,NM_153768	chr18,chr18,chr18,chr18,chr18,chr18,chr18	+,+,-,+,+,+,+	CABYR,CABYR,OSBPL1A,CABYR,CABYR,CABYR,CABYR	117,117,133410,610,117,117,117
chr10:81109111-81109724	chr10	+	81109194	81109680	True	NM_005729,NM_153367	chr10,chr10	+,-	PPIF,ZCCHC24	-2025,95753
chr11:9114135-9115201	chr11	+	9114137	9115219	True	NM_020974,NR_027713,NM_001170690	chr11,chr11,chr11	-,+,-	SCUBE2,KRT8P41,SCUBE2	-987,690,-987
chr1:27190406-27191095	chr1	+	27190612	27191088	True	NM_018066,NM_006142	chr1,chr1	-,+	GPN2,SFN	25831,-1030
chr3:38387100-38388011	chr3	+	38387294	38388052	True	NM_005108,NR_028389	chr3,chr3	+,-	XYLB,LOC100128640	198,108309
chr16:1129438-1129715	chr16	+	1129464	1129764	True	NM_001172560,NM_001053,NR_027242	chr16,chr16,chr16	+,+,-	SSTR5,SSTR5,LOC146336	-6759,-734,-733
chr6:105628067-105629999	chr6	+	105628068	105630007	True	NR_037157,NM_022361,NR_024539	chr6,chr6,chr6	+,-,-	C6orf112,POPDC3,POPDC3	-42557,-210,-3938
chr3:75714023-75714984	chr3	+	75714323	75714906	True	NR_037925,NM_001124759,NM_001128223	chr3,chr3,chr3	+,+,-	FLJ20518,FRG2C,ZNF717	-894,-888,119399
chr9:139651691-139652088	chr9	+	139651721	139652137	True	NM_203347,NM_178469,NR_033913,NM_198946	chr9,chr9,chr9,chr9	-,-,+,-	LCN15,LCN8,LOC100128593,LCN6	6878,644,-11159,-8741
chr4:9639747-9640288	chr4	+	9639763	9640020	True	NR_031688,NM_000798	chr4,chr4	-,+	MIR548I2,DRD5	-81826,143237
chr11:131242882-131243493	chr11	+	131242894	131243522	True	NM_001048209,NM_014758	chr11,chr11	+,-	NTM,SNX19	-2574,-456512
chr9:34709814-34710764	chr9	+	34709826	34710422	True	NM_004512,NM_002989	chr9,chr9	+,-	IL11RA,CCL21	-55945,5
chr19:53793606-53793993	chr19	+	53793608	53794040	True	NM_001195187,NM_033341	chr19,chr19	+,-	LOC646508,BIRC8	-8848,885
chr1:229698567-229700021	chr1	+	229698853	229699771	True	NM_012089,NM_014777	chr1,chr1	-,+	ABCB10,URB2	-4411,62209
chr19:18499192-18499437	chr19	+	18499202	18499486	True	NM_145256,NM_004864,NR_036156	chr19,chr19,chr19	-,+,+	LRRC25,GDF15,MIR3189	8979,-2285,-1881
chr19:3539417-3539650	chr19	+	3539456	3539552	True	NM_001135580,NM_001042680	chr19,chr19	+,-	C19orf71,C19orf28	-352,18069
chr1:43204114-43204418	chr1	+	43204148	43204434	True	NM_024097,NM_001123395,NM_148960,NM_001185117	chr1,chr1,chr1,chr1	+,-,-,-	C1orf50,CLDN19,CLDN19,CLDN19	28481,1541,1541,1541
chr3:50383662-50384795	chr3	+	50384013	50384837	True	NM_015896,NM_007022,NM_006545,NM_170712,NM_170713,NM_007182,NM_170714	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-,-	ZMYND10,CYB561D2,NPRL2,RASSF1,RASSF1,RASSF1,RASSF1	-857,3459,3699,-8349,-9118,-5646,-5646
chr1:152810721-152812608	chr1	+	152810827	152812586	True	NM_178351,NM_001128600	chr1,chr1	-,+	LCE1C,LCE6A	-31720,2743
chr17:72621822-72623418	chr17	+	72622216	72623251	True	NM_152460,NM_181449	chr17,chr17	+,-	C17orf77,CD300E	-41210,-2319
chr17:48961173-48962398	chr17	+	48961305	48962277	True	NM_005749,NM_175575	chr17,chr17	-,+	TOB1,WFIKKN2	-19892,-48751
chr19:46316692-46317573	chr19	+	46316910	46317590	True	NM_030785,NM_004497	chr19,chr19	-,+	RSPH6A,FOXA3	1065,49927
chr20:31784248-31786030	chr20	+	31784334	31785935	True	NM_080675,NR_026760	chr20,chr20	-,+	SUN5,BASE	-192095,-2974
chr16:11040157-11040395	chr16	+	11040188	11040438	True	NM_014015,NM_015226	chr16,chr16	-,+	DEXI,CLEC16A	-3931,-1896
chr14:103393014-103393388	chr14	+	103393069	103393204	True	NM_006035,NM_030943	chr14,chr14	-,+	CDC42BPB,AMN	130595,-4135
chr5:84959423-84960269	chr5	+	84959495	84960303	True	NM_005711,NR_003719	chr5,chr5	-,+	EDIL3,NBPF22P	-1278884,617958
chr17:4692450-4692661	chr17	+	4692454	4692628	True	NM_002798,NM_001014985,NM_001144939,NM_001144941,NM_001144940,NM_182566	chr17,chr17,chr17,chr17,chr17,chr17	+,+,-,-,-,-	PSMB6,GLTPD2,VMO1,VMO1,VMO1,VMO1	6828,-251,-2725,-2725,-2725,-2725
chr2:10181631-10182055	chr2	+	10181650	10181752	True	NM_001177716,NM_003597,NM_001037160,NM_001177718	chr2,chr2,chr2,chr2	+,+,-,+	KLF11,KLF11,CYS1,KLF11	2203,1929,38836,2619
chr7:2601348-2602921	chr7	+	2601550	2602617	True	NM_001100390,NM_152558,NM_152743	chr7,chr7,chr7	+,+,-	IQCE,IQCE,BRAT1	-2982,-2982,-6158
chr16:56660746-56661080	chr16	+	56660877	56661129	True	NM_175617,NR_036677,NM_176870,NR_001447,NM_005950	chr16,chr16,chr16,chr16,chr16	+,+,+,+,-	MT1E,MT1JP,MT1M,MT1L,MT1G	-1343,8521,5404,-9555,40898
chr2:41384749-41385121	chr2	+	41384751	41384842	True	NR_033996,NM_001112802	chr2,chr2	+,-	LOC388942,SLC8A1	719852,-645176
chr1:216892085-216892645	chr1	+	216892171	216892679	True	NM_001438,NR_024099,NM_138796	chr1,chr1,chr1	-,-,+	ESRRG,ESRRG,SPATA17	4178,4166,912015
chr1:183275150-183276087	chr1	+	183275210	183276105	True	NM_170706,NM_005562	chr1,chr1	-,+	NMNAT2,LAMC2	-1201,-120087
chr17:61972555-61973011	chr17	+	61972687	61972951	True	NM_022641,NM_022640,NR_002947,NM_001317	chr17,chr17,chr17,chr17	-,-,+,-	CSH1,CSH1,TCAM1P,CSH1	1120,1120,-38362,1120
chr17:61972555-61973011	chr17	+	61949791	61950055	False	NM_020991,NM_022645,NM_022644,NM_022557,NM_022556,NR_002947,NM_002059,NM_022558	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,+,-,-	CSH2,CSH2,CSH2,GH2,GH2,TCAM1P,GH2,GH2	1084,1084,1084,9218,9218,-15466,9218,9218
chr18:12408602-12408812	chr18	+	12408655	12408861	True	NM_006796,NM_001142405,NM_006553	chr18,chr18,chr18	-,+,+	AFG3L2,SLMO1,SLMO1	-31380,-812,-812
chr3:83265983-83266185	chr3	+	83265982	83266138	True	NM_001167674,NM_000158	chr3,chr3	+,-	CADM2,GBE1	1741994,-1455032
chr3:125801588-125801788	chr3	+	125801645	125801715	True	NM_017836,NM_001008486,NM_001008485,NM_001012337	chr3,chr3,chr3,chr3	-,-,-,+	SLC41A3,SLC41A3,SLC41A3,ROPN1B	1469,1469,1469,-113668
chr21:47604744-47606434	chr21	+	47604763	47606278	True	NR_002776,NM_001142854,NM_032261	chr21,chr21,chr21	+,-,-	MCM3AP-AS1,C21orf56,C21orf56	42879,-390,-390
chr1:63154463-63154774	chr1	+	63154476	63154818	True	NM_033407,NM_014495	chr1,chr1	-,+	DOCK7,ANGPTL3	-507,-91340
chr22:36630532-36631774	chr22	+	36630560	36631759	True	NM_030882,NM_145637,NM_001136540	chr22,chr22,chr22	-,-,+	APOL2,APOL2,APOL1	3980,4291,17357
chrX:133120286-133121299	chrX	+	133120400	133121267	True	NM_001164617,NM_001101357,NM_004484,NM_001164619,NM_001164618	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	GPC3,CCDC160,GPC3,GPC3,GPC3	-727,249809,-727,-727,-727
chr6:55039784-55040433	chr6	+	55039833	55040463	True	NM_001526,NM_001042406	chr6,chr6	+,-	HCRTR2,HMGCLL1	-813,403599
chr12:56049339-56049874	chr12	+	56049729	56049792	True	NM_001144996,NM_206899	chr12,chr12	-,+	ITGA7,OR10P1	51947,-19107
chr1:157043988-157044243	chr1	+	157044043	157044209	True	NM_001004341,NR_001560	chr1,chr1	-,+	ETV3L,CYCSP52	25441,53944
chr10:88781803-88782538	chr10	+	88781905	88782343	True	NM_024756,NM_001146157	chr10,chr10	-,+	MMRN2,FAM25A	-64480,-1910
chr17:33842821-33843626	chr17	+	33843166	33843668	True	NR_003037,NM_001195790	chr17,chr17	+,-	SNORD7,SLFN12L	57007,-28408
chr12:10878788-10880723	chr12	+	10878832	10880461	True	NM_003651,NM_001145426,NM_005042	chr12,chr12,chr12	-,-,+	CSDA,CSDA,PRH2	-2879,-2879,201372
chr18:9911879-9912987	chr18	+	9912753	9913019	True	NM_194434,NM_005134,NM_003574	chr18,chr18,chr18	+,-,+	VAPA,PPP4R1,VAPA	935,-298153,935
chr11:3402073-3403323	chr11	+	3402423	3403173	True	NM_001130519,NM_001130520,NM_007152,NR_024248	chr11,chr11,chr11,chr11	-,-,-,+	ZNF195,ZNF195,ZNF195,LOC650368	-1975,-1975,-1975,-290
chr3:129262951-129263720	chr3	+	129263084	129263750	True	NM_153833,NM_015103	chr3,chr3	+,-	H1FOO,PLXND1	-1078,61882
chr8:107681147-107682352	chr8	+	107681160	107682354	True	NM_139166,NM_181354	chr8,chr8	-,+	ABRA,OXR1	100168,-11175
chr11:7986139-7987591	chr11	+	7986411	7987389	True	NM_003754,NM_176821	chr11,chr11	+,-	EIF3F,NLRP10	21477,-1352
chr3:126418091-126418685	chr3	+	126418444	126418532	True	NM_032343,NM_052883	chr3,chr3	+,-	CHCHD6,TXNRD3	4585,-44477
chrX:57937874-57938973	chrX	+	57937925	57938987	True	NM_007156,NM_007157	chrX,chrX	-,+	ZXDA,ZXDB	-858,-319715
chr14:76128975-76129509	chr14	+	76129025	76129449	True	NM_015072,NM_007176	chr14,chr14	+,-	TTLL5,C14orf1	-1525,-1487
chr16:698070-698280	chr16	+	698115	698195	True	NM_138418,NM_032366,NM_145294	chr16,chr16,chr16	+,-,+	FAM195A,C16orf13,WDR90	-6317,-11768,1167
chr17:58096635-58096969	chr17	+	58096685	58096745	True	NM_003161,NR_002924	chr17,chr17	+,-	RPS6KB1,DHX40P1	-126293,-349
chr4:154265451-154265668	chr4	+	154265456	154265562	True	NM_032117,NR_001562	chr4,chr4	+,-	MND1,ANXA2P1	238,-35493
chr21:11138879-11140004	chr21	+	11139414	11139592	True	NM_001187,NR_037458	chr21,chr21	-,+	BAGE,MIR3687	-40477,-1313262
chr7:66047062-66047416	chr7	+	66047239	66047302	True	NM_001167961,NR_002933	chr7,chr7	+,-	KCTD7,LOC493754	46565,-3741
chr1:151687694-151688170	chr1	+	151687800	151688164	True	NM_001144956,NM_007185,NM_001172649,NM_001172648	chr1,chr1,chr1,chr1	+,-,-,-	RIIAD1,CELF3,CELF3,CELF3	5848,1176,768,678
chr16:82205293-82206038	chr16	+	82205334	82206054	True	NM_005792,NM_002153	chr16,chr16	-,+	MPHOSPH6,HSD17B2	-1505,-136527
chr17:42274068-42274270	chr17	+	42274168	42274254	True	NM_020218,NM_024107,NM_177441,NM_001098833,NM_001076674	chr17,chr17,chr17,chr17,chr17	-,+,+,-,+	ATXN7L3,TMUB2,TMUB2,ATXN7L3,TMUB2	1325,-9873,-9653,1325,-9873
chr19:5624640-5625332	chr19	+	5624642	5625234	True	NM_001201338,NM_001201339,NR_037699,NM_014649,NM_002967,NM_001201340	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,-,+,+	SAFB,SAFB,SAFB,SAFB2,SAFB,SAFB	-1654,-1654,-1654,-1704,-1654,-1654
chr13:111605264-111606385	chr13	+	111605498	111606222	True	NM_017664,NM_001113511	chr13,chr13	-,+	ANKRD10,ARHGEF7	-38082,161401
chr21:28338061-28338329	chr21	+	28338111	28338363	True	NR_024357,NM_007038	chr21,chr21	+,-	NCRNA00113,ADAMTS5	756334,1126
chr2:26465912-26466483	chr2	+	26465912	26466516	True	NM_000182,NM_000183	chr2,chr2	-,+	HADHA,HADHB	1134,1099
chr15:89179584-89180724	chr15	+	89179720	89180711	True	NR_026645,NM_002201	chr15,chr15	-,+	DET1,ISG20	-89808,1327
chr21:18989807-18991013	chr21	+	18989809	18990772	True	NM_001130914,NM_001338,NM_006806	chr21,chr21,chr21	-,+,-	BTG3,CXADR,BTG3	-4541,-104530,-4541
chr19:1287274-1287506	chr19	+	1287317	1287459	True	NR_027271,NM_001405	chr19,chr19	-,+	C19orf23,EFNA2	-17058,-1200
chr4:183840955-183841996	chr4	+	183840988	183841968	True	NR_003612,NM_001921,NM_001012732	chr4,chr4,chr4	+,-,-	FAM92A3,DCTD,DCTD	116849,-2358,-2358
chr1:99725980-99726733	chr1	+	99726242	99726734	True	NM_014839,NM_001037317,NM_001166252	chr1,chr1,chr1	+,-,+	LPPR4,LPPR5,LPPR4	3113,-255793,3113
chr22:50451003-50451243	chr22	+	50451038	50451290	True	NM_001001694,NM_001164104	chr22,chr22	-,+	IL17REL,MOV10L1	-11,77144
chr10:81838100-81838382	chr10	+	81838161	81838355	True	NR_027430,NR_027431,NR_027432,NR_027429,NR_027428,NM_025125	chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,-,+	LOC219347,LOC219347,LOC219347,LOC219347,LOC219347,C10orf57	644,644,644,644,644,70
chr19:36003058-36003585	chr19	+	36003322	36003590	True	NM_001126059,NM_001190348,NM_001126058,NM_001126057,NM_001126056,NM_001190349,NM_001190347,NR_033746,NM_014364,NM_033317	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,-,+,-	DMKN,DMKN,DMKN,DMKN,DMKN,DMKN,DMKN,DMKN,GAPDHS,DMKN	-1931,1020,1020,1020,1020,1020,1020,-1910,20723,1020
chr7:55761047-55761624	chr7	+	55761107	55761462	True	NM_182633,NR_027342,NR_027340,NR_027339	chr7,chr7,chr7,chr7	+,-,-,-	ZNF713,FKBP9L,FKBP9L,FKBP9L	218868,-4113,-5382,-3954
chr7:55761047-55761624	chr7	-	33033754	33033812	False	NM_001166118,NM_007270	chr7,chr7	-,+	NT5C3,FKBP9	46767,-36808
chr5:86692364-86693270	chr5	+	86692575	86692934	True	NM_022650,NM_001199189	chr5,chr5	+,-	RASA1,CCNH	-127872,15837
chr20:31277376-31278110	chr6	+	33541081	33541629	False	NR_028361,NM_001188	chr6,chr6	+,-	GGNBP1,BAK1	9846,6491
chr20:31277376-31278110	chr20	+	31277483	31278155	True	NM_006892,NM_182584	chr20,chr20	+,-	DNMT3B,C20orf203	72035,-37700
chr2:98279502-98280006	chr2	+	98279560	98280002	True	NM_001862,NM_005735	chr2,chr2	+,-	COX5B,ACTR1B	-17090,609
chr7:42278059-42278432	chr7	+	42278109	42278343	True	NM_000168,NR_027119	chr7,chr7	-,+	GLI3,LOC285954	-1491,-544614
chr22:45560780-45562290	chr22	+	45560790	45562093	True	NM_007172,NR_031651,NM_153645	chr22,chr22,chr22	+,-,+	NUP50,MIR1249,NUP50	-1117,34865,-291
chr21:26980451-26981221	chr21	+	26980600	26981271	True	NM_017446,NM_021219,NM_080794	chr21,chr21,chr21	-,+,-	MRPL39,JAM2,MRPL39	-799,30317,-799
chr1:152282881-152283853	chr1	+	152282917	152283839	True	NM_002016,NM_178438	chr1,chr1	-,+	FLG,LCE5A	13890,199480
chr8:122653207-122653875	chr8	+	122653558	122653933	True	NR_002835,NM_005328	chr8,chr8	+,-	HAS2-AS1,HAS2	-2023,-46
chr19:7585965-7586663	chr19	+	7586026	7586451	True	NM_018083,NM_080662,NM_020533	chr19,chr19,chr19	+,-,+	ZNF358,PEX11G,MCOLN1	-5073,-32121,1044
chr11:57313467-57313713	chr11	+	57313466	57313526	True	NM_012456,NM_001105565	chr11,chr11	-,+	TIMM10,SMTNL1	-15234,-3403
chr11:65404087-65404413	chr11	+	65404149	65404225	True	NM_002419,NM_006747,NM_153253	chr11,chr11,chr11	-,+,+	MAP3K11,SIPA1,SIPA1	-22429,1352,3366
chr4:40202431-40202844	chr4	+	40202524	40202874	True	NM_004310,NR_027277	chr4,chr4	+,-	RHOH,LOC344967	-4058,-143705
chr6:166756779-166757346	chr6	+	166756876	166757343	True	NM_145169,NR_027284	chr6,chr6	-,+	SFT2D1,LOC441177	-885,-355889
chr5:151784194-151784875	chr5	+	151784270	151784813	True	NM_198395,NM_020167	chr5,chr5	+,-	G3BP1,NMUR2	-632845,77
chr1:173804075-173804561	chr1	+	173804197	173804569	True	NM_033319,NM_018122	chr1,chr1	-,+	CENPL,DARS2	-10420,-10461
chr7:44044255-44044777	chr7	+	44044738	44044818	True	NM_175064,NR_003655	chr7,chr7	+,-	SPDYE1,POLR2J4	-4300,13980
chr17:43325782-43325984	chr17	+	43325826	43325954	True	NR_024434,NM_152343	chr17,chr17	+,-	LOC100133991,C17orf46	-574,13575
chr7:99907641-99909031	chr7	+	99907619	99909059	True	NM_001004351,NR_003613	chr7,chr7	+,-	SPDYE3,PMS2P1	-2345,24921
chr7:99907641-99909031	chr7	+	99906345	99906419	False	NM_001004351,NR_003613	chr7,chr7	+,-	SPDYE3,PMS2P1	-1071,27561
chr7:99907641-99909031	chr7	+	99910399	99911977	False	NM_001004351,NR_003613	chr7,chr7	+,-	SPDYE3,PMS2P1	-5125,22003
chr18:14392199-14392501	chr18	+	14392313	14392467	True	NR_024076,NR_026756	chr18,chr18	-,+	CXADRP3,LOC284233	106288,-54942
chr22:42898428-42898964	chr22	+	42898500	42898948	True	NR_027786,NM_015703	chr22,chr22	+,-	SERHL,RRP7A	-1966,16931
chr22:42898428-42898964	chr22	+	42951813	42952263	False	NR_002184,NM_014509	chr22,chr22	-,+	RRP7B,SERHL2	25804,-1939
chr6:168594247-168594469	chr6	+	168594264	168594478	True	NM_030615,NM_024919	chr6,chr6	+,-	KIF25,FRMD1	-175762,-114425
chr7:25164284-25164860	chr7	+	25164335	25164869	True	NM_018947,NM_016447	chr7,chr7	-,+	CYCS,MPP6	161,-551301
chr5:40680444-40681105	chr5	+	40680451	40681039	True	NM_012382,NM_000958	chr5,chr5	-,+	TTC33,PTGER4	75083,-470
chr16:833015-833270	chr16	+	833180	833308	True	NM_001025190,NM_058192,NM_022092	chr16,chr16,chr16	-,-,+	MSLNL,RPUSD1,CHTF18	-254,5125,5313
chr13:114015626-114017411	chr13	+	114015725	114017342	True	NM_024719,NM_005561	chr13,chr13	-,+	GRTP1,LAMP1	1171,-64308
chr2:202121790-202122059	chr2	+	202121855	202121923	True	NM_001080125,NM_001127391,NM_033356	chr2,chr2,chr2	+,-,+	CASP8,ALS2CR12,CASP8	830,100228,3299
chr5:731894-733248	chr5	+	732004	732754	True	NM_018140,NM_007030	chr5,chr5	+,-	CEP72,TPPP	-119650,-38494
chr7:51386727-51387788	chr7	+	51386783	51387593	True	NM_015198,NR_033845	chr7,chr7	-,+	COBL,LOC100129427	-2268,-787377
chr19:8405900-8406385	chr19	+	8405941	8406100	True	NM_001031,NM_198471	chr19,chr19	+,-	RPS28,KANK3	-19608,2103
chrY:15813712-15814308	chrY	+	15813733	15814189	True	NM_182660,NM_004202	chrY,chrY	-,+	UTY,TMSB4Y	-221183,1257
chr4:104642325-104644068	chr4	+	104642335	104643824	True	NM_001008388,NM_001059	chr4,chr4	+,-	CISD2,TACR3	-852259,-1362
chr18:77442226-77443916	chr18	+	77442411	77443825	True	NM_001202504,NM_048368,NM_004715,NM_001146343	chr18,chr18,chr18,chr18	+,+,+,-	CTDP1,CTDP1,CTDP1,PQLC1	-1032,-2661,-2661,267878
chr1:6642294-6643209	chr1	+	6642464	6642892	True	NM_014851,NM_005341	chr1,chr1	-,+	KLHL21,ZBTB48	20093,-2452
chrX:129404513-129406033	chrX	+	129404553	129405512	True	NM_017666,NM_003951	chrX,chrX	-,+	ZNF280C,SLC25A14	-1631,68534
chr11:65363348-65364069	chr11	+	65363530	65364108	True	NM_001099409,NM_032223,NM_033347,NM_005714,NM_033348,NM_033455	chr11,chr11,chr11,chr11,chr11,chr11	+,+,-,-,-,-	EHBP1L1,PCNXL3,KCNK7,KCNK7,KCNK7,KCNK7	-20072,19674,-63,-63,-63,-63
chr1:120904828-120905161	chr1	+	120904907	120905191	True	NR_027337,NM_001004340	chr1,chr1	+,-	HIST2H2BA,FCGR1B	842,30803
chr1:120904828-120905161	chr1	-	149784724	149784774	False	NM_001024599,NM_001161334,NM_001123375,NM_001034077	chr1,chr1,chr1,chr1	-,-,-,+	HIST2H2BF,HIST2H2BF,HIST2H3D,HIST2H4B	-796,-796,512,19446
chr1:120904828-120905161	chr1	-	149400030	149400196	False	NR_027484,NM_001024599	chr1,chr1	+,-	FCGR1C,HIST2H2BF	-30787,-801
chr14:23388854-23389087	chr14	+	23388957	23389121	True	NM_006109,NM_173527,NM_001077351,NM_001077352,NM_018107,NM_001039619	chr14,chr14,chr14,chr14,chr14,chr14	-,+,-,-,-,-	PRMT5,REM2,RBM23,RBM23,RBM23,PRMT5	9590,-36576,-561,-561,-561,9590
chr11:58978839-58979083	chr11	+	58978942	58979074	True	NM_001039396,NM_015177	chr11,chr11	-,+	MPEG1,DTX4	1470,-39181
chr8:76288910-76289119	chr8	+	76288937	76289167	True	NM_004133,NM_020647	chr8,chr8	+,-	HNF4G,JPH1	163035,-1055375
chr9:132963971-132964559	chr9	+	132964144	132964556	True	NM_001128826,NM_015033	chr9,chr9	+,-	NCS1,FNBP1	-1323,-158671
chr6:25816078-25817166	chr6	+	25816154	25816981	True	NM_005074,NM_005495	chr6,chr6	-,+	SLC17A1,SLC17A4	15363,-61284
chr1:89989287-89989945	chr1	+	89989350	89989908	True	NR_033981,NM_001134476	chr1,chr1	-,+	FLJ27354,LRRC8B	108595,488
chr14:45575474-45576920	chr14	+	45575809	45576824	True	NM_002013,NR_003691	chr14,chr14	-,+	FKBP3,SNORD127	26959,3253
chr2:157288693-157290075	chr2	+	157288842	157289931	True	NM_006186,NM_001083112,NM_000408	chr2,chr2,chr2	-,+,+	NR4A2,GPD2,GPD2	-99555,2033,2968
chr16:27326085-27327232	chr16	+	27326110	27327268	True	NM_000418,NM_001008699,NM_145080	chr16,chr16,chr16	+,+,-	IL4R,IL4R,NSMCE1	-918,-918,-45997
chr16:8814505-8815269	chr16	+	8814636	8815238	True	NM_001127448,NM_000663,NM_015421	chr16,chr16,chr16	+,+,-	ABAT,ABAT,TMEM186	-114,-7861,76317
chr14:21567644-21569155	chr14	+	21567649	21569165	True	NM_016423,NM_001101672,NM_001146683,NM_001102454	chr14,chr14,chr14,chr14	-,-,+,-	ZNF219,ZNF219,C14orf176,ZNF219	-841,-476,-604,3748
chr5:160973781-160974106	chr5	+	160973935	160974123	True	NM_000811,NM_021911,NM_000813	chr5,chr5,chr5	+,-,-	GABRA6,GABRB2,GABRB2	138534,1057,1057
chr19:1069417-1069622	chr19	+	1069422	1069614	True	NM_002695,NM_012292	chr19,chr19	-,+	POLR2E,HMHA1	25827,-2299
chr3:32860523-32860880	chr3	+	32860538	32860730	True	NM_016141,NM_001039111	chr3,chr3	-,+	DYNC1LI1,TRIM71	-248172,-1079
chr8:11156046-11156761	chr8	+	11156048	11156562	True	NM_173683,NM_015458	chr8,chr8	-,+	XKR6,MTMR9	-97173,-14099
chr16:85144636-85144993	chr16	+	85144648	85144966	True	NR_033984,NM_198491	chr16,chr16	+,-	LOC400548,FAM92B	25789,1198
chr3:150797882-150799846	chr3	+	150798054	150799626	True	NM_053002,NM_174878	chr3,chr3	+,-	MED12L,CLRN1	5049,-107268
chr17:46046895-46048576	chr17	+	46047121	46048455	True	NM_024320,NM_176096	chr17,chr17	-,+	PRR15L,CDK5RAP3	-12011,-27
chr14:35592236-35592854	chr14	+	35592461	35592898	True	NM_017917,NM_014672	chr14,chr14	-,+	PPP2R3C,KIAA0391	-942,-737
chr8:105601958-105602626	chr8	+	105602095	105602561	True	NM_001135703,NM_013437,NM_030788	chr8,chr8,chr8	-,-,+	LRP12,LRP12,TM7SF4	-843,-843,-250092
chr19:19007349-19007731	chr19	+	19007350	19007632	True	NM_198207,NM_021267,NM_019070,NM_001492	chr19,chr19,chr19,chr19	-,-,+,-	LASS1,LASS1,DDX49,GDF1	-397,-397,22851,-397
chr17:72208545-72209019	chr17	+	72208696	72208962	True	NR_026914,NM_000999,NM_001035258,NM_032646	chr17,chr17,chr17,chr17	-,+,+,+	MGC16275,RPL38,RPL38,TTYH2	548,-8952,-8952,733
chr19:11467763-11468214	chr19	+	11467805	11468206	True	NM_001170635,NM_022737,NM_198536	chr19,chr19,chr19	+,+,-	LPPR2,LPPR2,TMEM205	-1794,-1794,-10824
chr1:204327009-204327891	chr1	+	204327108	204327776	True	NM_001204171,NM_014935	chr1,chr1	+,-	MDM4,PLEKHA6	157730,1318
chr1:43155317-43156576	chr5	-	76360558	76360621	True	NR_003014,NR_024398	chr5,chr5	-,+	SNORA47,LOC728723	15838,22001
chr13:57741281-57741519	chr13	+	57741289	57741555	True	NM_001130407,NM_001130406,NM_001130405,NM_001130404,NM_198441,NM_030932	chr13,chr13,chr13,chr13,chr13,chr13	+,+,+,+,+,-	PRR20E,PRR20D,PRR20C,PRR20B,PRR20A,DIAPH3	-9,-9,-9,-9,-9,2845838
chr13:57741281-57741519	chr13	+	57715010	57715276	False	NM_001130407,NM_001130406,NM_001130405,NM_001130404,NM_198441,NR_031628	chr13,chr13,chr13,chr13,chr13,chr13	+,+,+,+,+,-	PRR20E,PRR20D,PRR20C,PRR20B,PRR20A,MIR1297	-9,-9,-9,-9,-9,-2828827
chr13:57741281-57741519	chr13	+	57721580	57721846	False	NM_001130407,NM_001130406,NM_001130405,NM_001130404,NM_198441,NR_031628	chr13,chr13,chr13,chr13,chr13,chr13	+,+,+,+,+,-	PRR20E,PRR20D,PRR20C,PRR20B,PRR20A,MIR1297	-9,-9,-9,-9,-9,-2835397
chr13:57741281-57741519	chr13	+	57728153	57728419	False	NM_001130407,NM_001130406,NM_001130405,NM_001130404,NM_198441,NR_031628	chr13,chr13,chr13,chr13,chr13,chr13	+,+,+,+,+,-	PRR20E,PRR20D,PRR20C,PRR20B,PRR20A,MIR1297	-9,-9,-9,-9,-9,-2841970
chr13:57741281-57741519	chr13	+	57734724	57734990	False	NM_001130407,NM_001130406,NM_001130405,NM_001130404,NM_198441,NR_031628	chr13,chr13,chr13,chr13,chr13,chr13	+,+,+,+,+,-	PRR20E,PRR20D,PRR20C,PRR20B,PRR20A,MIR1297	-9,-9,-9,-9,-9,-2848541
chr4:185218052-185218533	chr4	+	185218051	185218540	True	NM_152683,NM_153343	chr4,chr4	+,-	CCDC111,ENPP6	352226,-78937
chr7:138461816-138462079	chr7	+	138461961	138462067	True	NM_130841,NM_001085429	chr7,chr7	-,+	ATP6V0A4,TMEM213	-3179,20671
chr12:49741751-49742023	chr12	+	49741753	49742053	True	NM_001008223,NM_024902	chr12,chr12	-,+	C1QL4,DNAJC22	-10782,-763
chr19:38752558-38752832	chr19	+	38752678	38752793	True	NM_021102,NM_033256,NM_001166103	chr19,chr19,chr19	+,-,+	SPINT2,PPP1R14A,SPINT2	2304,-5506,2304
chr19:3726939-3728160	chr19	+	3727147	3727653	True	NM_014428,NM_012398	chr19,chr19	+,-	TJP3,PIP5K1C	720,-26670
chr10:74113725-74113938	chr10	+	74113724	74113878	True	NM_019058,NM_017626,NM_001002762	chr10,chr10,chr10	+,-,-	DDIT4,DNAJB12,DNAJB12	-80098,1079,1079
chr12:70638188-70638414	chr12	+	70638188	70638440	True	NR_037615,NM_014515,NM_002837,NM_001199303,NM_001199302	chr12,chr12,chr12,chr12,chr12	+,+,-,+,+	CNOT2,CNOT2,PTPRB,CNOT2,CNOT2	-745,-1465,365242,-745,-1429
chr12:120907268-120907617	chr12	+	120907284	120907614	True	NM_003769,NM_001037494	chr12,chr12	-,+	SRSF9,DYNLL1	0,45
chr10:61886368-61887614	chr10	+	61886591	61887440	True	NM_001149,NM_001170406	chr10,chr10	-,+	ANK3,CDK1	13395,650648
chr8:105355053-105356056	chr8	+	105355076	105355983	True	NM_001385,NM_030788	chr8,chr8	-,+	DPYS,TM7SF4	123351,-3073
chr8:19675831-19677105	chr8	+	19675833	19677148	True	NR_024040,NM_018142	chr8,chr8	-,+	CSGALNACT1,INTS10	-135572,-966
chr1:62784097-62784624	chr1	+	62784133	62784341	True	NM_181712,NM_001017415	chr1,chr1	-,+	KANK4,USP1	792,117633
chr3:108477707-108479162	chr3	+	108477853	108478911	True	NM_016388,NM_032579	chr3,chr3	+,-	TRAT1,RETNLB	62719,-1723
chr17:75371328-75372358	chr17	+	75371334	75372210	True	NM_001113494,NM_001113493,NR_036200	chr17,chr17,chr17	+,+,-	SEPT9,SEPT9,MIR4316	14,-2113,20976
chr16:11945514-11945716	chr16	+	11945533	11945761	True	NM_015659,NM_001192	chr16,chr16	-,+	RSL1D1,TNFRSF17	-91,113202
chr19:58863453-58863706	chr19	+	58863465	58863749	True	NM_130786,NR_015380	chr19,chr19	-,+	A1BG,A1BG-AS1	1166,-180
chr7:104007499-104009468	chr7	+	104007790	104009472	True	NM_199000,NM_181747	chr7,chr7	+,-	LHFPL3,ORC5	-38745,-159295
chr18:31020913-31021267	chr18	+	31020979	31021275	True	NM_030632,NM_001105528,NM_198995	chr18,chr18,chr18	+,-,-	ASXL3,C18orf34,C18orf34	137265,-934,-294
chr20:23128717-23129779	chr20	+	23128846	23129608	True	NR_034149,NM_001052	chr20,chr20	-,+	LOC200261,SSTR4	-15573,-112840
chr1:85737313-85738071	chr1	+	85737359	85737864	True	NM_003921,NM_145172	chr1,chr1	-,+	BCL10,WDR63	4780,-209419
chr1:24239769-24241046	chr1	+	24240032	24240474	True	NM_001841,NM_017761	chr1,chr1	-,+	CNR2,PNRC2	-215,45826
chr8:37337061-37338897	chr8	+	37337407	37338832	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	214468,266789
chrX:37210670-37211843	chrX	+	37211062	37211882	True	NM_001173489,NM_001173486,NM_001173490,NM_001142395,NM_000950,NM_006520	chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,-	PRRG1,PRRG1,PRRG1,PRRG1,PRRG1,DYNLT3	-2537,-2592,-2537,-2592,-2592,495057
chr6:82956313-82957041	chr6	+	82956489	82957009	True	NM_006670,NM_015525	chr6,chr6	+,-	TPBG,IBTK	115913,489
chr16:90078256-90078536	chr16	+	90078257	90078535	True	NM_001042610,NM_024043,NR_023348	chr16,chr16,chr16	-,-,+	DBNDD1,DBNDD1,GAS8	7452,-1728,10472
chrX:47521097-47522557	chrX	+	47521130	47522220	True	NM_004182,NR_027444,NM_153477,NR_028119	chrX,chrX,chrX,chrX	-,+,-,+	UXT,LOC100133957,UXT,LOC100133957	-2570,-2930,-2614,-2950
chr11:62440572-62442080	chr11	+	62440615	62441672	True	NM_015853,NR_004390,NM_001043229,NM_001085372,NM_024099	chr11,chr11,chr11,chr11,chr11	-,+,+,+,-	UBXN1,SNORA57,METTL12,C11orf83,C11orf48	4912,-7772,-7887,-1540,-1374
chrX:68722140-68723304	chrX	+	68722142	68723235	True	NM_145119,NM_015686	chrX,chrX	-,+	PJA1,FAM155B	-336777,1842
chr2:228238499-228239104	chr2	+	228238667	228239111	True	NM_020194,NM_024795	chr2,chr2	+,-	MFF,TM4SF20	-46496,4961
chr19:52800534-52800791	chr19	+	52800591	52800751	True	NM_001102657,NM_144684	chr19,chr19	-,+	ZNF836,ZNF480	-125695,-216
chr15:57884448-57884792	chr15	+	57884551	57884761	True	NM_152451,NM_001018100,NM_001018091,NM_001018090,NM_170697	chr15,chr15,chr15,chr15,chr15	+,+,+,+,-	GCOM1,GCOM1,GCOM1,GCOM1,ALDH1A2	-500,-500,-500,-500,421524
chr14:24836537-24836840	chr14	+	24836540	24836838	True	NM_001198966,NM_001136022,NM_001198965,NM_006871,NM_004554,NM_001198967	chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,-,+,+	NFATC4,NFATC4,NFATC4,RIPK3,NFATC4,NFATC4	1463,-446,387,-27298,387,-446
chr12:113444350-113444736	chr12	+	113444366	113444646	True	NM_016817,NM_001193521	chr12,chr12	+,-	OAS2,RASAL1	-28143,128963
chr21:33779998-33780753	chr21	+	33780321	33780669	True	NM_058187,NM_014825	chr21,chr21	+,-	C21orf63,URB1	4082,-15009
chr11:36593323-36594952	chr11	+	36593469	36594987	True	NM_000448,NM_000536	chr11,chr11	+,-	RAG1,RAG2	-3967,24893
chr1:16171346-16172263	chr1	+	16171443	16171992	True	NR_024279,NM_015001	chr1,chr1	-,+	FLJ37453,SPEN	2710,2366
chr2:202900463-202900694	chr2	+	202900507	202900735	True	NM_001005781,NM_003507	chr2,chr2	-,+	SUMO1,FZD7	202637,-1248
chr14:21979228-21979473	chr14	+	21979324	21979460	True	NM_014828,NM_019852	chr14,chr14	+,-	TOX4,METTL3	-34040,47
chr4:83717642-83718646	chr4	+	83717729	83718579	True	NM_024672,NM_001037582,NM_024906	chr4,chr4,chr4	+,-,-	THAP9,SCD5,SCD5	103257,1481,1481
chr21:45874758-45875000	chr21	+	45874773	45874953	True	NM_198691,NM_030891	chr21,chr21	-,+	KRTAP10-1,LRRC3	85175,439
chr18:11907288-11908249	chr18	+	11907516	11908216	True	NM_023075,NM_020412	chr18,chr18	-,+	MPPE1,CHMP1B	475,-56178
chr9:139962752-139963226	chr9	+	139963039	139963111	True	NM_207309,NM_178448	chr9,chr9	+,-	UAP1L1,C9orf140	8841,1967
chr12:108726357-108727711	chr12	+	108726766	108727712	True	NM_001142344,NM_004072,NM_007076,NM_001142343	chr12,chr12,chr12,chr12	-,-,+,-	CMKLR1,CMKLR1,FICD,CMKLR1	5432,5432,181338,5432
chr17:7256004-7256283	chr17	+	7256042	7256263	True	NM_032442,NM_198154,NM_001002914	chr17,chr17,chr17	-,+,+	NEURL4,TMEM95,KCTD11	-23404,2233,-885
chr6:154831938-154832304	chr6	+	154831964	154832182	True	NM_173515,NM_014892	chr6,chr6	-,+	CNKSR3,SCAF8	-211,222329
chrX:101179378-101180872	chrX	+	101179377	101180839	True	NM_001011657,NM_080390	chrX,chrX	-,+	ZMAT1,TCEAL2	6250,199820
chr16:70557204-70557455	chr16	+	70557204	70557376	True	NM_015386,NM_012426,NR_003696,NR_037420,NM_001195139	chr16,chr16,chr16,chr16,chr16	-,+,+,+,-	COG4,SF3B3,SNORD111B,MIR3647,COG4	131,314,6028,6025,131
chr7:99815784-99817256	chr7	+	99816234	99817148	True	NM_024070,NM_152742	chr7,chr7	+,-	PVRIG,GPC2	-56,-41244
chr22:44319241-44319506	chr22	+	44319240	44319404	True	NM_025225,NM_138814	chr22,chr22	+,-	PNPLA3,PNPLA5	214,-31347
chr10:90208742-90210284	chr10	+	90209013	90210299	True	NM_018363,NM_001010939	chr10,chr10	-,+	RNLS,LIPJ	132833,136219
chr9:91793583-91795024	chr9	+	91793782	91794852	True	NM_016848,NM_001827	chr9,chr9	-,+	SHC3,CKS2	-100,131260
chr4:54966779-54967171	chr4	+	54967000	54967166	True	NM_133267,NM_012110	chr4,chr4	+,-	GSX2,CHIC2	-803,-36212
chr11:86743471-86744686	chr11	+	86743616	86744422	True	NR_033149,NM_012193,NM_022918,NM_001168724	chr11,chr11,chr11,chr11	+,-,+,+	TMEM135,FZD4,TMEM135,TMEM135	4463,-77183,4463,4463
chr10:81838983-81840929	chr10	+	81839046	81840285	True	NR_027430,NR_027431,NR_027432,NR_027429,NR_027428,NM_025125	chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,-,+	LOC219347,LOC219347,LOC219347,LOC219347,LOC219347,C10orf57	-97,-97,-97,-97,-97,-671
chr5:79552262-79552810	chr5	+	79552293	79552619	True	NM_001174072,NM_178276,NM_001174071,NM_032567	chr5,chr5,chr5,chr5	-,-,-,+	SERINC5,SERINC5,SERINC5,SPZ1	-395,-395,-395,63170
chr17:16894855-16895085	chr17	+	16894899	16895019	True	NM_015134,NM_012452	chr17,chr17	+,-	MPRIP,TNFRSF13B	51087,-19497
chr15:100882550-100883270	chr15	+	100882549	100883087	True	NR_028140,NM_024708,NM_139057,NR_028139	chr15,chr15,chr15,chr15	-,+,-,-	FLJ42289,ASB7,ADAMTS17,FLJ42289	7401,259667,-366,7886
chr10:103541204-103542297	chr10	+	103541324	103542334	True	NM_006993,NM_033164,NM_033165,NM_033163,NR_036114,NM_006119	chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,+,-	NPM3,FGF8,FGF8,FGF8,MIR3158-1,FGF8	886,-5565,-5565,-5565,-180201,-5565
chr18:14486998-14487261	chr18	+	14486998	14487282	True	NR_024076,NR_026756	chr18,chr18	-,+	CXADRP3,LOC284233	11473,-149627
chr18:14486998-14487261	chr15	+	21019887	21019941	False	NM_207355,NR_027411	chr15,chr15	-,+	POTEB,GOLGA8C	52086,-252264
chr18:14486998-14487261	chr15	+	22026561	22026615	False	NR_015416,NR_024387	chr15,chr15	+,-	LOC727924,CXADRP2	251416,-9683
chr1:204003103-204003772	chr1	+	204003407	204003795	True	NM_005686,NR_027902	chr1,chr1	+,-	SOX13,C1orf157	38450,6647
chr3:45729960-45730165	chr3	+	45729997	45730193	True	NM_014016,NR_033947	chr3,chr3	+,-	SACM1L,LOC644714	560,231
chr17:27915147-27915647	chr17	+	27915288	27915666	True	NM_001085454,NM_014030,NM_152345	chr17,chr17,chr17	-,-,+	GIT1,GIT1,ANKRD13B	994,994,4860
chr1:150981354-150981605	chr1	+	150981398	150981650	True	NM_001040217,NM_021222,NM_001163258,NM_001163259,NM_018379,NM_001163260	chr1,chr1,chr1,chr1,chr1,chr1	-,+,-,-,-,-	FAM63A,PRUNE,FAM63A,FAM63A,FAM63A,FAM63A	-2013,-476,-544,-2125,-544,-2125
chr5:149547472-149547698	chr5	+	149547674	149547744	True	NM_001804,NM_002609	chr5,chr5	+,-	CDX1,PDGFRB	-1381,-12252
chr17:5023427-5025057	chr17	+	5023725	5024529	True	NM_014519,NM_004505	chr17,chr17	-,+	ZNF232,USP6	1918,7157
chr12:5282903-5283604	chr12	+	5282984	5283592	True	NM_006422,NM_002234	chr12,chr12	-,+	AKAP3,KCNA5	-528641,-129950
chrX:50211825-50212134	chrX	+	50211951	50212183	True	NM_033670,NM_001013742	chrX,chrX	+,-	CCNB3,DGKK	-184463,1588
chr8:82024092-82024419	chr8	+	82024126	82024268	True	NM_001444,NM_018440	chr8,chr8	+,-	FABP5,PAG1	168449,85
chr10:29116200-29116740	chr10	+	29116280	29116650	True	NR_033805,NM_012342	chr10,chr10	-,+	LOC220906,BAMBI	-294997,-149907
chr3:186561932-186562674	chr3	+	186561941	186562720	True	NM_004797,NM_181573,NM_001177800	chr3,chr3,chr3	+,-,+	ADIPOQ,RFC4,ADIPOQ	-1529,-37457,-1529
chr17:15849465-15850077	chr17	+	15849529	15850013	True	NM_000676,NM_001042697	chr17,chr17	+,-	ADORA2B,ZSWIM7	-1349,53043
chrX:52897301-52897705	chrX	+	52897522	52897640	True	NM_014138,NM_133179,NM_130776	chrX,chrX,chrX	+,-,-	FAM156A,XAGE3,XAGE3	30221,-403,-1190
chrX:52897301-52897705	chrX	+	55684808	55684858	False	NM_201286,NM_198451	chrX,chrX	-,+	USP51,FOXR2	-169177,-35026
chr9:25679912-25681858	chr9	+	25680187	25681898	True	NM_001004125,NM_001099223	chr9,chr9	-,+	TUSC1,IFT74	-1331,1265138
chr5:10759459-10759957	chr5	+	10759492	10759837	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-195108,1600
chr8:37381517-37382283	chr8	+	37381820	37382323	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	170977,223291
chr20:23860251-23860829	chr20	+	23860305	23860859	True	NM_001900,NR_001279	chr20,chr20	-,+	CST5,CSTT	75,-360573
chr11:57001524-57001824	chr11	+	57001561	57001809	True	NM_001005210,NM_005161,NR_027991	chr11,chr11,chr11	+,-,-	LRRC55,APLNR,APLNR	-52391,3168,3168
chr17:6339100-6339579	chr17	+	6339104	6339563	True	NM_019013,NM_014336,NM_001195228,NM_001033054,NM_001033055	chr17,chr17,chr17,chr17,chr17	+,-,+,-,-	FAM64A,AIPL1,FAM64A,AIPL1,AIPL1	8171,-585,8171,-585,-585
chrX:66766252-66766582	chrX	+	66766279	66766563	True	NM_000044,NM_002547	chrX,chrX	+,-	AR,OPHN1	-2456,886786
chr10:135238808-135239055	chr10	+	135238819	135238929	True	NR_002934,NM_001012508	chr10,chr10	+,-	LOC619207,SPRN	28502,-698
chr10:135238808-135239055	chr10	+	135383614	135383724	False	NM_001143764,NR_033789,NM_001143763,NM_130784,NM_000773	chr10,chr10,chr10,chr10,chr10	-,-,-,-,+	SYCE1,SPRNP1,SYCE1,SYCE1,CYP2E1	-4476,-152,-4476,-738,-42805
chr10:88729462-88729965	chr10	+	88729591	88729881	True	NM_024756,NM_133447,NM_006829	chr10,chr10,chr10	-,+,+	MMRN2,AGAP11,C10orf116	-12166,616,-1454
chr17:26973989-26974308	chr17	+	26974009	26974315	True	NM_014680,NM_003170	chr17,chr17	-,+	KIAA0100,SUPT6H	-1836,14986
chr14:77649338-77649951	chr14	+	77649351	77649957	True	NM_174976,NM_020431	chr14,chr14	-,+	ZDHHC22,TMEM63C	-41217,-1300
chrX:28001142-28002626	chrX	+	28001161	28002326	True	NM_182506,NM_001017930	chrX,chrX	+,-	MAGEB10,DCAF8L1	-175114,-1595
chr12:111356968-111357776	chr12	+	111357190	111357580	True	NM_000432,NR_036513	chr12,chr12	-,+	MYL2,LOC100131138	874,16825
chr4:17775291-17775845	chr4	+	17775494	17775728	True	NM_015688,NM_022346	chr4,chr4	-,+	FAM184B,NCAPG	7457,36796
chr4:9539324-9540156	chr4	+	9539340	9539608	True	NR_031688,NM_001040448	chr4,chr4	-,+	MIR548I2,DEFB131	18379,-93131
chrX:47510454-47511774	chrX	+	47510500	47511524	True	NM_005229,NR_028119,NM_004182,NR_027444,NM_153477,NM_001114123	chrX,chrX,chrX,chrX,chrX,chrX	-,+,-,+,-,-	ELK1,LOC100133957,UXT,LOC100133957,UXT,ELK1	-497,6707,7086,6727,7042,-497
chr17:38467522-38468934	chr17	+	38467642	38468490	True	NM_000964,NM_001145301,NM_001145302,NM_152219	chr17,chr17,chr17,chr17	+,+,+,-	RARA,RARA,RARA,GJD3	-2270,5982,5982,52505
chr9:47168177-47168531	chr9	+	47168182	47168494	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-3537452,-480667
chr9:47168177-47168531	chr9	-	67680963	67681275	False	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	112964,245485
chr9:47168177-47168531	chr9	-	46272046	46272358	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2641316,415207
chr9:47168177-47168531	chr9	-	44759725	44760037	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	230198,-1128995
chr9:47168177-47168531	chr9	+	45110961	45111273	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-120776,-1480231
chr13:50367649-50367860	chr13	+	50367697	50367869	True	NM_002267,NR_003268	chr13,chr13	-,+	KPNA3,CTAGE10P	-640,96675
chr10:124134990-124136300	chr10	+	124135124	124136322	True	NM_001001974,NM_001010912,NM_001195608	chr10,chr10,chr10	+,-,+	PLEKHA1,C10orf120,PLEKHA1	-1085,323066,9262
chr7:154738415-154740019	chr7	+	154738448	154739813	True	NM_007349,NR_024476	chr7,chr7	-,+	PAXIP1,LOC100132707	54926,-18272
chr6:135263815-135265295	chr6	+	135264012	135264970	True	NM_170771,NM_022568,NM_001193480,NM_005375	chr6,chr6,chr6,chr6	-,-,-,+	ALDH8A1,ALDH8A1,ALDH8A1,MYB	6340,6340,6340,237482
chr17:46176555-46176891	chr17	+	46176817	46176933	True	NM_001127228,NM_152244,NM_006807,NM_013323	chr17,chr17,chr17,chr17	-,+,-,+	CBX1,SNX11,CBX1,SNX11	2008,7986,1685,8013
chr22:46659271-46660378	chr22	+	46659554	46660031	True	NM_006071,NM_017931	chr22,chr22	-,+	PKDREJ,TTC38	-335,3829
chr7:56184676-56186318	chr7	+	56184807	56185727	True	NM_015411,NM_001145712	chr7,chr7	+,-	SUMF2,LOC389493	-52946,-717
chr7:4815754-4816067	chr7	+	4815800	4816030	True	NM_020144,NM_014855	chr7,chr7	-,+	PAPOLB,KIAA0415	85645,-589
chr15:29211360-29211620	chr15	+	29211371	29211661	True	NM_001130414,NM_138704,NM_005503	chr15,chr15,chr15	+,-,+	APBA2,NDNL2,APBA2	2178,350406,2178
chr1:112530829-112531433	chr1	+	112530849	112531471	True	NM_172198,NM_007204,NM_004980	chr1,chr1,chr1	-,+,-	KCND3,DDX20,KCND3	356,-232710,356
chr14:67877417-67877650	chr14	+	67877467	67877594	True	NM_016445,NM_004094	chr14,chr14	-,+	PLEK2,EIF2S1	1297,-50492
chr17:39674587-39676170	chr17	+	39674591	39676208	True	NM_002276,NM_005801,NM_002275	chr17,chr17,chr17	-,+,-	KRT19,EIF1,KRT15	8483,168918,-82
chr3:58314321-58314608	chr3	+	58314338	58314415	True	NM_017771,NR_033384	chr3,chr3	+,-	PXK,PDHB	4201,105206
chr2:62113645-62115334	chr2	+	62113714	62115215	True	NM_006430,NM_152516	chr2,chr2	-,+	CCT4,COMMD1	626,17587
chr10:69458099-69459425	chr10	+	69458251	69459348	True	NM_013266,NM_012238	chr10,chr10	-,+	CTNNA3,SIRT1	-2302,185078
chr4:4389606-4389871	chr4	+	4389614	4389776	True	NM_017816,NM_014392,NM_001040101	chr4,chr4,chr4	-,+,+	LYAR,D4S234E,D4S234E	-97718,-1682,-1682
chrX:95941556-95942529	chrX	+	95941558	95942384	True	NM_007309,NR_003539,NM_006729	chrX,chrX,chrX	+,-,+	DIAPH2,LOC643486,DIAPH2	-1947,-348657,-1947
chr4:160212606-160213937	chr4	+	160212765	160213917	True	NR_037459,NM_014247	chr4,chr4	-,+	MIR3688,RAPGEF2	-162719,-23826
chr6:6796579-6796950	chr6	+	6796710	6796862	True	NM_004271,NR_026970	chr6,chr6	+,-	LY86,LY86-AS1	-207836,-173651
chr20:61341293-61341674	chr20	+	61341504	61341646	True	NM_002531,NR_024470	chr20,chr20	+,-	NTSR1,LOC100127888	-1366,-43531
chr10:126151595-126151977	chr10	+	126151834	126151942	True	NM_001146340,NM_022126,NM_001167880	chr10,chr10,chr10	-,+,+	NKX1-2,LHPP,LHPP	-13284,-1550,-1550
chr2:170622695-170623533	chr2	+	170623002	170623518	True	NM_003142,NM_014168	chr2,chr2	+,-	SSB,METTL5	31870,57898
chr19:59026537-59027795	chr19	+	59026819	59027835	True	NM_012254,NM_032792,NM_005762	chr19,chr19,chr19	-,-,+	SLC27A5,ZBTB45,TRIM28	-3387,3136,28000
chr2:49294172-49295093	chr2	+	49294173	49295111	True	NM_000145,NM_006872	chr2,chr2	-,+	FSHR,GTF2A1L	86605,-449287
chr1:150459955-150460440	chr1	+	150460109	150460336	True	NM_025150,NM_001197320	chr1,chr1	+,-	TARS2,MCL1	-243,91929
chr6:33281550-33281940	chr6_qbl_hap6	+	4513804	4514100	False	NM_001145338,NM_001350,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	3916,8992,8992,-24200,3709,360,360,360,8992
chr6:33281550-33281940	chr6_mcf_hap5	+	4755300	4755596	False	NM_001145338,NM_001350,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	3916,8989,8989,-24195,3709,360,360,360,8989
chr6:33281550-33281940	chr6_cox_hap2	+	4725370	4725504	False	NM_001145338,NM_001350,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	4080,9157,9157,-24195,3873,522,522,522,9157
chr6:33281550-33281940	chr6_dbb_hap3	+	4562881	4563015	False	NM_001145338,NM_001350,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	4078,9155,9155,-24194,3871,522,522,522,9155
chr6:33281550-33281940	chr6	+	33281558	33281854	True	NM_001145338,NM_001350,NR_024517,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	3915,8989,8989,8989,-24197,3708,360,360,360,8989
chr4:579338-580695	chr4	+	579731	580395	True	NM_000283,NM_133474	chr4,chr4	+,-	PDE6B,ZNF721	38967,-86289
chr10:42977554-42979054	chr10	+	42977917	42979010	True	NR_026777,NR_026827	chr10,chr10	-,+	ZNF37BP,LOC84856	69320,-7044
chr12:111125821-111126277	chr12	+	111125825	111126275	True	NM_001040107,NM_032369,NM_001173975	chr12,chr12,chr12	-,-,+	HVCN1,HVCN1,TCTN1	1392,721,-73964
chr14:77774363-77774857	chr14	+	77774492	77774695	True	NM_145870,NM_013382	chr14,chr14	+,-	GSTZ1,POMT2	12534,12589
chr15:93114071-93114559	chr15	+	93114200	93114534	True	NR_021493,NM_153040	chr15,chr15	-,+	LOC100144604,C15orf32	1009,-99344
chr5:179223119-179223335	chr5	+	179223232	179223376	True	NM_054013,NR_031598,NM_145867	chr5,chr5,chr5	-,-,+	MGAT4B,MIR1229,LTC4S	6549,2020,-2297
chr17:3598083-3598473	chr17	+	3598115	3598423	True	NM_002561,NM_175080,NR_037928,NM_001204520,NM_031298,NM_001204519	chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,+,-	P2RX5,P2RX5,P2RX5-TAX1BP3,P2RX5,TMEM93,P2RX5	1325,1325,1325,1325,-26076,1325
chr12:52444309-52444734	chr12	+	52444372	52444712	True	NM_002135,NM_173157,NM_001081492	chr12,chr12,chr12	+,+,-	NR4A1,NR4A1,KRT80	473,473,141122
chr7:2884206-2886176	chr7	+	2884238	2885972	True	NM_133463,NM_007353	chr7,chr7	+,-	AMZ1,GNA12	-165126,-279
chr17:79881155-79881430	chr17	+	79881380	79881448	True	NM_002359,NM_016538,NR_015454,NM_032711	chr17,chr17,chr17,chr17	-,-,+,-	MAFG,SIRT7,LOC92659,MAFG	4190,-5322,4256,10
chr15:74753856-74754934	chr15	+	74753875	74754617	True	NM_006465,NM_032907,NM_201265	chr15,chr15,chr15	+,-,-	ARID3B,UBL7,UBL7	78930,-365,-346
chr18:72339016-72340662	chr18	+	72339034	72340369	True	NM_017757,NR_024484,NM_001146190,NM_001146189	chr18,chr18,chr18,chr18	+,-,+,+	ZNF407,LOC400657,ZNF407,ZNF407	2549,-73963,2549,2549
chr9:100747670-100748194	chr9	+	100747683	100748022	True	NM_018437,NM_006401	chr9,chr9	-,+	HEMGN,ANP32B	-40549,-2245
chr22:19705255-19705549	chr22	+	19705350	19705598	True	NM_024627,NM_001009939,NM_002688,NR_037611,NR_037612,NM_000407	chr22,chr22,chr22,chr22,chr22,chr22	-,+,+,+,+,+	C22orf29,SEPT5,SEPT5,SEPT5-GP1BB,SEPT5-GP1BB,GP1BB	136823,359,-3414,-658,393,5467
chr7:94536001-94536486	chr7	+	94536001	94536498	True	NM_003919,NM_001166161,NM_001166163,NM_001166162,NM_017650,NM_001166160	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,+,+	SGCE,PPP1R9A,PPP1R9A,PPP1R9A,PPP1R9A,PPP1R9A	-250480,2711,2711,2711,450,450
chr2:27372462-27373028	chr2	+	27372589	27372945	True	NM_178553,NM_175769	chr2,chr2	-,+	C2orf53,TCF23	-10257,-695
chr11:64575549-64576053	chr11	+	64575728	64576070	True	NM_004579,NM_006244,NM_130799,NM_000244,NM_130804,NM_130803,NM_130802,NM_130801,NM_130800	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,+,-,-,-,-,-,-,-	MAP4K2,PPP2R5B,MEN1,MEN1,MEN1,MEN1,MEN1,MEN1,MEN1	-5015,116072,2168,2168,2746,2746,2193,2015,2015
chr15:81668642-81668930	chr15	+	81668642	81668891	True	NM_001080532,NM_004513	chr15,chr15	-,+	TMC3,IL16	-2224,-79447
chr6:26970394-26971445	chr6	+	26970441	26971233	True	NR_026775,NR_026776	chr6,chr6	+,-	NCRNA00240,LOC100270746	-45720,16902
chr8:144624808-144625856	chr8	+	144625176	144625333	True	NM_001166237,NM_015117	chr8,chr8	+,-	GSDMD,ZC3H3	10223,-1556
chr17:43687540-43688882	chr17_ctg5_hap1	-	1179656	1180460	False	NR_026680,NR_026901,NR_037772,NR_027295	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	-,+,-,-	MGC57346,LOC644172,CRHR1,MGC57346	-9205,7978,-9203,-9474
chr17:43687540-43688882	chr17	+	43687716	43688528	True	NR_026680,NR_026901,NR_037772,NR_027295	chr17,chr17,chr17,chr17	+,-,+,+	MGC57346,LOC644172,CRHR1,MGC57346	9183,-7968,9181,9452
chrX:49853502-49855001	chrX	+	49853534	49855000	True	NM_139289,NM_000084	chrX,chrX	-,+	AKAP4,CLCN5	110055,-21378
chr16:29822084-29823213	chr16	+	29822361	29823229	True	NM_017458,NM_024516,NM_005115,NM_006319,NM_145239,NM_001042539,NM_002383	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,-,+,+,+	MVP,C16orf53,MVP,CDIPT,PRRT2,MAZ,MAZ	8485,4298,8485,51399,179,-4557,-4557
chr10:69641508-69642817	chr10	+	69641638	69642550	True	NM_201262,NM_001142498,NM_012238	chr10,chr10,chr10	-,+,+	DNAJC12,SIRT1,SIRT1	-43701,2388,1876
chr17:26701850-26702471	chr17	+	26702059	26702345	True	NM_001080837,NM_000638,NM_015077	chr17,chr17,chr17	-,-,+	SEBOX,VTN,SARM1	-9794,-4686,-3123
chr11:8682758-8683518	chr11	+	8682894	8683452	True	NM_000990,NM_014818	chr11,chr11	+,-	RPL27A,TRIM66	20542,-2511
chr19:10697301-10697945	chr19	+	10697505	10697911	True	NM_001145056,NM_005498	chr19,chr19	+,-	SLC44A2,AP1M2	15209,130
chr19:14799360-14800351	chr19	+	14799474	14800356	True	NM_032433,NM_032571	chr19,chr19	+,-	ZNF333,EMR3	513,-13744
chr17:56084109-56085054	chr17	+	56084138	56084896	True	NR_034041,NM_001078166,NM_006924,NM_080677	chr17,chr17,chr17,chr17	-,-,-,+	SRSF1,SRSF1,SRSF1,DYNLL2	57,57,57,75883
chr12:9599816-9600542	chr12	+	9599838	9600554	True	NR_033399,NR_024374	chr12,chr12	-,+	DDX12,LOC642846	264,-163636
chr12:9599816-9600542	chr12	-	9436815	9436969	False	NR_036263,NR_024374	chr12,chr12	-,+	MIR1244-3,LOC642846	-44668,-613
chr12:21178205-21179630	chr12	+	21178227	21179550	True	NM_001009562,NM_021094	chr12,chr12	+,-	LST-3TM12,SLCO1A2	-9648,308339
chr2:10954009-10954321	chr2	+	10954156	10954246	True	NM_005742,NM_144583	chr2,chr2	-,+	PDIA6,ATP6V1C2	-1196,-92438
chr9:130637823-130638332	chr9	+	130638102	130638280	True	NM_000476,NM_001018078	chr9,chr9	-,+	AK1,FPGS	1792,-72645
chr10:54073187-54073486	chr10	+	54073192	54073367	True	NM_012242,NM_000242	chr10,chr10	+,-	DKK1,MBL2	673,458144
chr19:41701506-41702041	chr19	+	41701599	41702085	True	NM_030622,NM_000660	chr19,chr19	+,-	CYP2S1,TGFB1	-2535,157796
chr10:121414306-121416058	chr10	+	121414492	121415800	True	NM_004281,NM_003252	chr10,chr10	+,-	BAG3,TIAL1	-3668,-57951
chr19:43100113-43100643	chr19	+	43100210	43100606	True	NM_001816,NR_036584	chr19,chr19	-,+	CEACAM8,LOC100289650	-1128,225408
chr7:6412716-6413675	chr7	+	6412733	6412949	True	NM_006908,NM_018890,NM_001037163	chr7,chr7,chr7	+,+,-	RAC1,RAC1,C7orf70	1176,1176,-24143
chrX:53713262-53714846	chrX	+	53713651	53714890	True	NM_031407,NM_001031745	chrX,chrX	-,+	HUWE1,RIBC1	22,-263812
chr11:2422423-2423157	chr11	+	2422529	2423042	True	NM_005706,NM_014555	chr11,chr11	+,-	TSSC4,TRPM5	480,21283
chr1:43231802-43232033	chr1	+	43231805	43231898	True	NM_022356,NM_001146289,NM_024097	chr1,chr1,chr1	-,-,+	LEPRE1,LEPRE1,C1orf50	908,908,1017
chr19:35070009-35070260	chr19	+	35070009	35070191	True	NR_027620,NM_001080436	chr19,chr19	-,+	LOC643719,WTIP	-1413,-97180
chr16:85613316-85613985	chr16	+	85613359	85613895	True	NM_001134473,NM_016095	chr16,chr16	+,-	KIAA0182,GINS2	31133,108743
chr12:93771021-93771527	chr12	+	93771042	93771417	True	NM_003348,NM_199040,NM_019094,NR_002212	chr12,chr12,chr12,chr12	-,+,+,+	UBE2N,NUDT4,NUDT4,NUDT4P1	64659,283,283,328
chr22:25373080-25373361	chr22	+	25373086	25373302	True	NM_001145206,NM_001001663	chr22,chr22	+,-	KIAA1671,TMEM211	50638,-37772
chr6:86300285-86301585	chr6	+	86300499	86301387	True	NM_153816,NM_002526,NM_020468	chr6,chr6,chr6	-,+,-	SNX14,NT5E,SNX14	2298,-141252,2298
chr20:36321021-36322190	chr20	+	36321144	36322138	True	NM_006698,NM_030877	chr20,chr20	-,+	BLCAP,CTNNBL1	-164811,295
chr12:18858722-18859088	chr12	+	18858828	18858895	True	NM_033328,NM_033123	chr12,chr12	+,-	CAPZA3,PLCZ1	32149,32074
chr17:39684753-39685049	chr17	+	39684858	39684930	True	NM_002276,NM_005801,NM_002275	chr17,chr17,chr17	-,+,-	KRT19,EIF1,KRT15	-217,160196,-9588
chrX:43739566-43741302	chrX	+	43739843	43741109	True	NM_000898,NM_000240	chrX,chrX	-,+	MAOB,MAOA	662,-224492
chr1:41155249-41157167	chr1	+	41155285	41156997	True	NR_024567,NM_014223,NM_001142589,NM_001142588,NM_001142587,NM_001142590	chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,+,+,+	LOC100130557,NFYC,NFYC,NFYC,NFYC,NFYC	986,244,244,244,244,682
chr20:29951773-29952783	chr20	+	29952184	29952507	True	NM_153289,NM_054112	chr20,chr20	-,+	DEFB119,DEFB118	25952,3913
chr2:203131112-203131607	chr2	+	203131373	203131654	True	NR_003058,NM_015934,NM_003352	chr2,chr2,chr2	+,+,-	SNORD70,NOP58,SUMO1	9499,-916,-28051
chr10:99331435-99331806	chr10	+	99331456	99331800	True	NM_178832,NM_001129981,NM_020349	chr10,chr10,chr10	-,+,+	MORN4,ANKRD2,ANKRD2	61594,455,455
chr9:98166952-98167934	chr9	+	98167545	98167869	True	NM_000136,NR_029496	chr9,chr9	-,+	FANCC,MIR24-1	-87554,-319299
chr21:40757638-40758434	chr21	+	40757637	40758465	True	NM_004627,NM_004965,NM_001146218	chr21,chr21,chr21	+,-,+	WRB,HMGN1,WRB	-5475,-36590,1226
chr16:2274061-2274501	chr16	+	2274116	2274516	True	NM_004424,NM_001042371	chr16,chr16	+,-	E4F1,PGP	-600,-9294
chr16:17566333-17567341	chr16	+	17566658	17567395	True	NR_003569,NM_022166	chr16,chr16	+,-	ABCC6P1,XYLT1	1015174,-1920
chr16:86256234-86256668	chr16	+	86256329	86256619	True	NR_024406,NM_001451	chr16,chr16	-,+	LOC732275,FOXF1	122722,287513
chr6:34360226-34360455	chr6	+	34360257	34360469	True	NM_006703,NM_020804	chr6,chr6	-,+	NUDT3,PACSIN1	38,73383
chr20:1204387-1205103	chr20	+	1204476	1205076	True	NM_018354,NM_001136566	chr20,chr20	-,+	C20orf46,RAD21L1	-39359,1687
chr6:36954213-36955065	chr6	+	36954553	36955081	True	NM_014341,NM_173558	chr6,chr6	-,+	MTCH1,FGD2	-604,18341
chr8:144899285-144899622	chr8	+	144899308	144899668	True	NR_033849,NM_182706,NR_030633,NM_015356	chr8,chr8,chr8,chr8	+,-,-,-	LOC100128338,SCRIB,MIR937,SCRIB	-83049,-1759,-4096,-1759
chr12:31909332-31910569	chr12	+	31909580	31910400	True	NR_004854,NM_001135863	chr12,chr12	-,+	AMN1,METTL20	-27472,-97028
chr8:21909634-21910428	chr8	+	21909689	21910376	True	NM_001978,NM_024815,NM_003867,NM_001114135,NM_001114137,NM_001114136,NM_001114139,NM_001114138	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	+,-,+,+,+,+,+,+	EPB49,NUDT18,FGF17,EPB49,EPB49,EPB49,EPB49,EPB49	6309,56606,-9312,4999,704,1951,1951,6309
chr1:21608348-21608705	chr1	+	21608445	21608507	True	NM_001113347,NM_032264,NM_001113349,NM_001397	chr1,chr1,chr1,chr1	-,+,-,-	ECE1,NBPF3,ECE1,ECE1	-2262,158123,8309,8525
chr7:87105528-87105921	chr7	+	87105561	87105969	True	NM_000443,NM_021151,NM_018850,NM_018849	chr7,chr7,chr7,chr7	-,+,-,-	ABCB4,CROT,ABCB4,ABCB4	-542,-130661,-542,-542
chrX:98024955-98025903	chrX	+	98025013	98025694	True	NM_022144,NR_024608	chrX,chrX	+,-	TNMD,LOC442459	1814095,1169204
chr22:24261753-24263151	chr22	+	24261892	24262906	True	NM_001080843,NM_002415	chr22,chr22	-,+	GSTT2B,MIF	40512,-25378
chr1:160063734-160064732	chr1	+	160063755	160064531	True	NM_052868,NM_004983	chr1,chr1	-,+	IGSF8,KCNJ9	3927,-12446
chr3:10334777-10335939	chr3	+	10334867	10335879	True	NM_001134941,NM_001134946,NM_001134944,NM_001134945,NR_026829,NR_024138,NR_004431,NR_024146,NM_016362,NR_024145,NR_024144,NR_024132,NR_024133,NR_024134,NR_024135,NR_024136,NR_024137	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,+,-,+,+,-,+,+,-,-,-,-,-,-	GHRL,GHRL,GHRL,GHRL,C3orf42,GHRL,GHRLOS,GHRLOS,GHRL,GHRLOS,GHRLOS,GHRL,GHRL,GHRL,GHRL,GHRL,GHRL	-2448,-236,-236,-236,-8815,-236,-7480,-7480,-2448,-7480,-7480,-236,-236,-236,-236,-236,-236
chr1:212613906-212614846	chr1	+	212613938	212614658	True	NR_026598,NM_013349,NM_018252	chr1,chr1,chr1	+,+,-	NENF,NENF,TMEM206	-7760,-7760,-25671
chr17:36001515-36003280	chr17	+	36001866	36003226	True	NM_007010,NM_007026	chr17,chr17	-,+	DDX52,DUSP14	317,-151974
chr17:73585368-73585568	chr17	+	73585539	73585599	True	NR_003587,NM_020753	chr17,chr17	+,-	MYO15B,CASKIN2	-1451,-73912
chr2:41384327-41384749	chr2	+	41384391	41384787	True	NR_033996,NM_001112802	chr2,chr2	+,-	LOC388942,SLC8A1	719907,-644816
chr19:43383395-43385045	chr19	+	43383751	43384937	True	NM_001184826,NM_006905,NR_036584,NM_001184825	chr19,chr19,chr19,chr19	-,-,+,-	PSG1,PSG1,LOC100289650,PSG1	48,48,-57787,48
chr17:19014655-19015170	chr17	+	19014778	19014960	True	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	15821,-64442
chr17:19014655-19015170	chr17	-	18966231	18966411	False	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	64370,-15895
chr17:19014655-19015170	chr17	-	19092332	19092512	False	NM_006613,NM_001102664	chr17,chr17	-,+	GRAP,EPN2	-141996,48177
chr10:102290848-102292578	chr10	+	102291653	102292293	True	NM_017902,NM_005004	chr10,chr10	+,-	HIF1AN,NDUFB8	3347,-2017
chr5:37379613-37380531	chr5	+	37379670	37380432	True	NM_153485,NM_018034,NM_004298	chr5,chr5,chr5	-,+,-	NUP155,WDR70,NUP155	-8473,-309,-8783
chr6:46912018-46913888	chr6	+	46912239	46913296	True	NM_005588,NM_015234	chr6,chr6	+,-	MEP1A,GPR116	-151198,9442
chr10:70305375-70305664	chr10	+	70305421	70305486	True	NM_030625,NM_152707	chr10,chr10	+,-	TET1,SLC25A16	14630,-18141
chr2:27719810-27721168	chr2	+	27720136	27721052	True	NM_022823,NM_015662,NM_001486	chr2,chr2,chr2	-,-,+	FNDC4,IFT172,GCKR	-2010,-7565,-481
chr19:52870671-52871173	chr19	+	52870709	52871179	True	NM_001102657,NM_001145434	chr19,chr19	-,+	ZNF836,ZNF880	-195813,1990
chr5:162935537-162935925	chr5	+	162935787	162935957	True	NM_182796,NM_145266,NM_013283	chr5,chr5,chr5	+,-,+	MAT2B,NUDCD2,MAT2B	-5614,-48644,-3260
chr16:75527261-75528063	chr16	+	75527497	75528079	True	NM_007285,NM_021615	chr16,chr16	+,-	GABARAPL2,CHST6	72169,897
chr10:105253562-105253770	chr10	+	105253705	105253771	True	NM_001129742,NM_004210	chr10,chr10	-,+	CALHM3,NEURL	-14708,-21
chr2:107148602-107148858	chr2	+	107148624	107148869	True	NM_001144013,NR_003506	chr2,chr2	-,+	RGPD3,PLGLA	-63823,-145915
chr17:76126584-76127197	chr17	+	76126732	76127246	True	NM_152468,NM_001127198,NM_007267	chr17,chr17,chr17	+,-,-	TMC8,TMC6,TMC6	16,-1871,1292
chr6:26384415-26385360	chr6	+	26384630	26385233	True	NM_006995,NM_003543,NM_181531,NM_001197237,NM_001197239,NM_001197238,NM_001197240	chr6,chr6,chr6,chr6,chr6,chr6,chr6	+,-,+,+,+,+,+	BTN2A2,HIST1H4H,BTN2A2,BTN2A2,BTN2A2,BTN2A2,BTN2A2	-1359,-98903,-1359,-1249,-1359,-1364,-1359
chr22:19708379-19708785	chr22	+	19708436	19708670	True	NM_024627,NM_001009939,NM_002688,NR_037611,NR_037612,NM_000407	chr22,chr22,chr22,chr22,chr22,chr22	-,+,+,+,+,+	C22orf29,SEPT5,SEPT5,SEPT5-GP1BB,SEPT5-GP1BB,GP1BB	133751,-2529,-6500,-3744,-2495,2395
chr7:75988470-75988830	chr7	+	75988616	75988726	True	NM_012479,NM_007155	chr7,chr7	-,+	YWHAG,ZP3	-274,38114
chr3:69985740-69987128	chr3	+	69985824	69987106	True	NM_198178,NM_001184968,NM_000248,NM_015123,NM_198158	chr3,chr3,chr3,chr3,chr3	+,+,+,-,+	MITF,MITF,MITF,FRMD4B,MITF	-124,-124,-124,-550394,-124
chr1:204332712-204333270	chr1	+	204332795	204333314	True	NM_001204171,NR_027022,NM_014935	chr1,chr1,chr1	+,-,-	MDM4,LOC127841,PLEKHA6	152192,5590,-3751
chr11:70246009-70247296	chr11	+	70246052	70247148	True	NM_133266,NM_138565,NM_005231,NM_001184740	chr11,chr11,chr11,chr11	-,+,+,+	SHANK2,CTTN,CTTN,CTTN	260825,-1491,-1491,-1491
chr6:167427383-167429113	chr6	+	167427504	167428975	True	NR_037504,NM_194429	chr6,chr6	-,+	MIR3939,FGFR1OP	-16104,-14749
chr14:57277170-57277424	chr14	+	57277191	57277477	True	NM_021728,NM_172337,NR_029385	chr14,chr14,chr14	-,-,+	OTX2,OTX2,OTX2OS1	-7,-4846,2423
chr17:37819851-37820133	chr17	+	37820023	37820133	True	NM_002686,NM_003673,NM_033419	chr17,chr17,chr17	+,+,-	PNMT,TCAP,PGAP3	4373,1465,24227
chr12:96253462-96254571	chr12	+	96253492	96254267	True	NM_003095,NM_021229	chr12,chr12	+,-	SNRPF,NTN4	-835,-68956
chr7:123594318-123594518	chr7	+	123594357	123594564	True	NM_001174046,NM_001136002	chr7,chr7	+,-	SPAM1,TMEM229A	-28500,79014
chr10:88414659-88415199	chr10	+	88414661	88415131	True	NM_033282,NM_015045,NM_001030015	chr10,chr10,chr10	+,-,+	OPN4,WAPAL,OPN4	-398,-133120,-398
chr19:52694460-52694857	chr19	+	52694563	52694901	True	NM_001102657,NR_033500,NM_014225	chr19,chr19,chr19	-,+,+	ZNF836,PPP2R1A,PPP2R1A	-19667,-1559,-1559
chr8:90980954-90981899	chr8	+	90981019	90981679	True	NM_002485,NM_001359	chr8,chr8	-,+	NBN,DECR1	15274,31900
chr2:187581788-187583788	chr2	+	187581820	187583752	True	NM_182521,NM_177454	chr2,chr2	-,+	ZSWIM2,FAM171B	130196,-23082
chr2:198243286-198243955	chr2	+	198243381	198243855	True	NM_025147,NM_012433	chr2,chr2	+,-	COQ10B,SF3B1	74375,55966
chrX:15288913-15289840	chrX	+	15289173	15289444	True	NM_024087,NM_203281,NM_001031739,NM_001168530,NM_001168531	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	ASB9,BMX,ASB9,ASB9,ASB9	-880,229455,-880,-880,-584
chr18:48499146-48500827	chr18	+	48499163	48500798	True	NM_018696,NM_001127174	chr18,chr18	+,-	ELAC1,MRO	-4838,-147409
chr17:38373689-38375083	chr17	+	38373954	38375050	True	NM_133264,NM_021724	chr17,chr17	+,-	WIPF2,NR1D1	523,-116981
chr11:47573944-47574159	chr11	+	47573945	47574207	True	NM_001143984,NM_006560	chr11,chr11	+,-	PTPMT1,CELF1	12774,635
chr12:110493447-110494248	chr12	+	110493961	110494205	True	NM_207435,NM_033121	chr12,chr12	-,+	C12orf76,ANKRD13A	11353,-56777
chr7:143099785-143100179	chr7	+	143099818	143100152	True	NR_033897,NM_005232	chr7,chr7	+,-	LOC285965,EPHA1	4753,5891
chr3:196067879-196069076	chr3	+	196068075	196069009	True	NM_138461,NM_001204898,NM_152672,NM_001204897,NR_037950	chr3,chr3,chr3,chr3,chr3	-,-,+,-,-	TM4SF19,TM4SF19,OSTalpha,TM4SF19,TM4SF19-TCTEX1D2	-2784,-2784,-124750,-2784,-2784
chr4:48130740-48131571	chr4	+	48130910	48131516	True	NM_003328,NM_207330	chr4,chr4	-,+	TXK,NIPAL1	4807,-112171
chrX:135068038-135068277	chrX	+	135068037	135068326	True	NM_173470,NM_006359,NM_001177651,NM_001042537	chrX,chrX,chrX,chrX	-,+,+,+	MMGT1,SLC9A6,SLC9A6,SLC9A6	-11903,-502,-505,-502
chr11:58376369-58377378	chr11	+	58376562	58377291	True	NM_000614,NM_001143995	chr11,chr11	+,-	CNTF,LPXN	12854,-30923
chr2:34070419-34071397	chr2	+	34070615	34070847	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-331724,-117331
chr15:93634305-93634740	chr15	+	93634314	93634760	True	NM_001166287,NM_020211,NR_036136	chr15,chr15,chr15	-,-,+	RGMA,RGMA,MIR3175	-2562,-1871,-186737
chr10:5701556-5702803	chr10	+	5701920	5702792	True	NM_024701,NR_024581,NM_017782,NR_037164	chr10,chr10,chr10,chr10	-,-,+,-	ASB13,ASB13,C10orf18,ASB13	5816,5816,24008,5816
chr20:33733659-33734418	chr20	+	33733926	33734363	True	NM_018217,NM_006404,NR_026728,NM_001145025	chr20,chr20,chr20,chr20	-,+,-,-	EDEM2,PROCR,EDEM2,EDEM2	848,25410,848,848
chr3:185086669-185088277	chr3	+	185087112	185087770	True	NM_001966,NM_004721	chr3,chr3	-,+	EHHADH,MAP3K13	-115226,-6193
chr4:1870140-1871165	chr4	+	1870155	1871009	True	NM_012318,NM_001042424	chr4,chr4	-,+	LETM1,WHSC1	-12181,2113
chr9:34990186-34990497	chr9	+	34990213	34990409	True	NM_001135004,NM_001135005,NM_012266,NM_007126	chr9,chr9,chr9,chr9	+,+,+,-	DNAJB5,DNAJB5,DNAJB5,VCP	-539,3,-539,82380
chr19:15592490-15593659	chr19	+	15592747	15592996	True	NM_173483,NM_052890	chr19,chr19	+,-	CYP4F22,PGLYRP2	26339,-2432
chr17:8534869-8536104	chr17	+	8535075	8535913	True	NM_030808,NM_005964	chr17,chr17	+,-	NDEL1,MYH10	-195947,-1039
chr10:88983706-88984604	chr10	+	88983705	88983775	True	NM_001099338,NR_024397	chr10,chr10	+,-	FAM22A,LOC728190	1429,118596
chr6:149639455-149640346	chr6	+	149639653	149640375	True	NM_207360,NM_015093	chr6,chr6	-,+	ZC3H12D,TAB2	165835,-268
chr1:204656379-204656851	chr1	+	204656386	204656872	True	NM_201630,NM_001005389,NM_006338	chr1,chr1,chr1	-,+,-	LRRN2,NFASC,LRRN2	-1789,140909,-1905
chr11:71496041-71497579	chr11	+	71496169	71497362	True	NM_018172,NM_152563,NR_029192,NM_001099653	chr11,chr11,chr11,chr11	+,+,-,+	FAM86C,FAM86C,LOC100133315,FAM86C	1194,1194,142188,1194
chr17:7285009-7285306	chr17	+	7285068	7285306	True	NM_003985,NM_001201576	chr17,chr17	+,-	TNK1,PLSCR3	-754,12906
chr17:1550592-1551005	chr17	+	1550742	1550886	True	NM_001163673,NR_028075,NM_031430,NR_028076,NM_145352,NM_145350,NM_003693	chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,-,-,-,-	WDR81,SCARF1,RILP,SCARF1,SCARF1,SCARF1,SCARF1	68930,-1701,2556,-1701,-1701,-1701,-1701
chr12:51420341-51420639	chr12	+	51420456	51420530	True	NM_000617,NM_001174128,NM_001174129,NM_001174125,NM_001174126,NM_001174127,NM_001024668,NR_033422,NR_033421	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,-,-,-,-,-,+,-,-	SLC11A2,SLC11A2,SLC11A2,SLC11A2,SLC11A2,SLC11A2,LETMD1,SLC11A2,SLC11A2	-257,-257,-532,1578,-257,-257,21553,-257,-257
chr3:99544914-99546329	chr3	+	99544914	99546376	True	NM_014890,NM_032359	chr3,chr3	-,+	FILIP1L,C3orf26	48723,-8294
chr1:31845989-31846333	chr1	+	31846144	31846318	True	NM_001199038,NM_004102	chr1,chr1	+,-	SERINC2,FABP3	36093,-221
chr17:46185374-46186913	chr17	+	46185557	46186131	True	NM_001127228,NM_013323,NM_006807,NM_152244	chr17,chr17,chr17,chr17	-,+,-,+	CBX1,SNX11,CBX1,SNX11	-6674,-661,-6997,-688
chrX:110654434-110655364	chrX	+	110654537	110655336	True	NM_000555,NR_033974,NM_001195553,NM_178151,NM_178153,NM_178152	chrX,chrX,chrX,chrX,chrX,chrX	-,+,-,-,-,-	DCX,DKFZp686D0853,DCX,DCX,DCX,DCX	-163,99553,174,133,174,174
chr6:56949553-56950924	chr6	+	56949772	56950647	True	NM_001031623,NM_183227,NM_015555	chr6,chr6,chr6	+,-,+	ZNF451,RAB23,ZNF451	4180,135661,4180
chr1:52457364-52459238	chr1	+	52457538	52459100	True	NM_002867,NM_001136497	chr1,chr1	-,+	RAB3B,BTF3L4	-1102,62756
chr15:44721918-44723434	chr15	+	44722140	44722944	True	NR_034171,NM_016396	chr15,chr15	-,+	LOC645212,CTDSPL2	106215,-2625
chr20:46415742-46416233	chr20	+	46415743	46416133	True	NM_018837,NM_198596,NM_181659,NM_001161841	chr20,chr20,chr20,chr20	-,-,+,-	SULF2,SULF2,NCOA3,SULF2	-935,-383,-285200,-383
chr6:40555803-40556396	chr6	+	40555860	40556327	True	NR_024015,NM_020737	chr6,chr6	+,-	TDRG1,LRFN2	-209748,-734
chr18:44140671-44141177	chr18	+	44140712	44141204	True	NM_152470,NM_001145472	chr18,chr18	+,-	RNF165,LOXHD1	-226576,-1442
chr12:122751318-122751564	chr12	+	122751388	122751474	True	NM_030765,NM_022916	chr12,chr12	+,-	B3GNT4,VPS33A	-63218,-320
chr16:27561518-27561725	chr16	+	27561535	27561759	True	NM_015202,NM_001520	chr16,chr16	+,-	KIAA0556,GTF3C1	-118,-284
chr8:19674603-19674835	chr8	+	19674645	19674817	True	NR_024040,NM_018142	chr8,chr8	-,+	CSGALNACT1,INTS10	-134384,100
chr11:4626270-4628268	chr11	+	4626462	4628300	True	NM_018073,NM_001005169	chr11,chr11	-,+	TRIM68,OR52I1	1188,-11244
chr19:1955093-1955442	chr19	+	1955133	1955451	True	NR_033400,NM_001319	chr19,chr19	-,+	C19orf34,CSNK1G2	-585,-14023
chr3:125581738-125583081	chr3	+	125581785	125583102	True	NM_001015050,NR_024250,NR_031687	chr3,chr3,chr3	-,+,-	ALG1L,LOC100125556,MIR548I1	72836,52341,-72390
chr11:18546617-18548208	chr11	+	18546744	18547982	True	NM_144972,NM_006292	chr11,chr11	+,-	LDHAL6A,TSG101	-69431,557
chr2:136743307-136744932	chr2	+	136743442	136744981	True	NM_001349,NM_014607	chr2,chr2	-,+	DARS,UBXN4	-220,-244304
chr6:146057239-146058169	chr6	+	146057244	146058187	True	NM_005670,NM_000838,NM_001018041	chr6,chr6,chr6	-,+,-	EPM2A,GRM1,EPM2A	-253,290594,-253
chr3:122273334-122274342	chr3	+	122273501	122274375	True	NM_031458,NM_001146105,NM_001146106,NM_138287,NM_001146104,NM_001146103,NM_001146102	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,+,-,-,-	PARP9,PARP9,PARP9,DTX3L,PARP9,PARP9,PARP9	9204,8828,8875,8809,8875,9204,8828
chr8:143807247-143807762	chr8	+	143807438	143807796	True	NM_016647,NM_020427	chr8,chr8	+,-	C8orf55,SLURP1	824,16083
chr14:21507305-21508918	chr14	+	21507849	21508959	True	NM_001012264,NM_173846,NM_032572	chr14,chr14,chr14	-,+,+	RNASE13,TPPP2,RNASE7	-4905,-9564,1425
chr11:4828049-4828267	chr11	+	4828074	4828252	True	NM_001004753,NM_001005177	chr11,chr11	+,-	OR51F2,OR52R1	14363,-2464
chr7:92859561-92861218	chr7	+	92859639	92861116	True	NM_024553,NM_017667,NM_001039372	chr7,chr7,chr7	+,+,-	CCDC132,CCDC132,HEPACAM2	536,536,-3857
chr1:179201526-179202339	chr1	+	179201925	179202190	True	NM_001168238,NM_001168237,NM_001168236,NM_007314,NM_001136001,NM_003101	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,+	ABL2,ABL2,ABL2,ABL2,ABL2,SOAT1	-3106,-3106,-3106,-3106,-3106,60826
chr19:33575725-33576284	chr19	+	33575919	33576129	True	NM_033103,NM_018025	chr19,chr19	-,+	RHPN2,GPATCH1	-20095,-4184
chr14:70656074-70656983	chr14	+	70656086	70657018	True	NM_058240,NM_182932,NM_033262,NM_003813,NM_183002	chr14,chr14,chr14,chr14,chr14	-,-,-,+,-	SLC8A3,SLC8A3,SLC8A3,ADAM21,SLC8A3	-299,-299,-299,267198,-299
chr5:93916503-93917899	chr5	+	93916725	93917944	True	NM_001145678,NM_032290	chr5,chr5	-,+	KIAA0825,ANKRD32	36415,36446
chr12:57608664-57609140	chr12	+	57608720	57609108	True	NM_020142,NM_007224	chr12,chr12	-,+	NDUFA4L2,NXPH4	25417,1469
chr11:59520802-59521340	chr11	+	59520801	59521151	True	NM_004177,NM_001005324,NM_001178040	chr11,chr11,chr11	+,-,+	STX3,OR10V1,STX3	1380,-39483,1380
chr1:160318305-160320132	chr1	+	160318646	160319993	True	NM_004371,NM_015331,NM_001098398	chr1,chr1,chr1	-,+,-	COPA,NCSTN,COPA	-5292,-5643,-5292
chr2:111334828-111335541	chr2	+	111334840	111335505	True	NM_001142807,NM_001037866,NM_001123363,NM_032260,NM_005054	chr2,chr2,chr2,chr2,chr2	+,-,-,-,-	ACOXL,RGPD6,RGPD6,RGPD5,RGPD5	154644,854,854,854,-162
chr2:111334828-111335541	chr2	+	113191269	113191571	False	NM_153712,NM_005054,NM_001164463	chr2,chr2,chr2	+,-,-	TTL,RGPD5,RGPD8	48171,-162,-47
chr2:111334828-111335541	chr2	-	109307609	109307671	False	NM_022336,NM_006267	chr2,chr2	-,+	EDAR,RANBP2	298219,28265
chr2:111334828-111335541	chr2	-	110551138	110551803	False	NM_178584,NM_001123363,NM_001037866,NM_032260,NM_005054	chr2,chr2,chr2,chr2,chr2	-,+,+,+,+	SEPT10,RGPD6,RGPD6,RGPD5,RGPD5	-179355,-854,-854,-854,162
chrX:47421064-47421738	chrX	+	47421072	47421574	True	NM_001654,NM_006950	chrX,chrX	+,-	ARAF,SYN1	-607,57732
chr16:29803204-29804682	chr16	+	29803278	29804380	True	NM_175900,NM_007317	chr16,chr16	-,+	C16orf54,KIF22	-45938,-1283
chr14:24540818-24541297	chr14	+	24540892	24541322	True	NM_006032,NM_006177	chr14,chr14	+,-	CPNE6,NRL	-187,12560
chr14:85998194-85998467	chr14	+	85998287	85998387	True	NM_013231,NM_000153	chr14,chr14	+,-	FLRT2,GALC	-1850,2461278
chr8:124922402-124922675	chr8	+	124922417	124922705	True	NM_004306,NM_001039112	chr8,chr8	-,+	ANXA13,FER1L6	-172770,-58241
chr12:123378958-123380400	chr12	+	123378978	123380186	True	NM_003959,NM_024667	chr12,chr12	+,-	HIP1R,VPS37B	-58992,576
chr1:202929771-202930570	chr1	+	202930070	202930602	True	NM_016243,NM_001127687,NM_015999,NM_138391	chr1,chr1,chr1,chr1	-,-,-,+	CYB5R1,ADIPOR1,ADIPOR1,TMEM183A	5852,-2370,-2585,45931
chr12:6606943-6607814	chr12	+	6607217	6607687	True	NM_016497,NM_014865	chr12,chr12	-,+	MRPL51,NCAPD2	-4746,-3974
chr3:67706565-67708459	chr3	+	67706585	67708506	True	NM_001177599,NM_003848,NM_213609	chr3,chr3,chr3	-,-,+	SUCLG2,SUCLG2,FAM19A1	-1547,-1547,344947
chr14:100773368-100773616	chr14	+	100773408	100773622	True	NM_001039355,NR_029906	chr14,chr14	-,+	SLC25A29,MIR345	-548,573
chr11:93863071-93864298	chr11	+	93863174	93864162	True	NM_015368,NM_016540	chr11,chr11	+,-	PANX1,GPR83	-1131,270473
chr19:15905286-15905662	chr19	+	15905351	15905643	True	NM_013940,NM_001004466	chr19,chr19	-,+	OR10H1,OR10H5	13343,-543
chr19:15905286-15905662	chr19	-	15918062	15918112	False	NM_013940,NM_001004466	chr19,chr19	-,+	OR10H1,OR10H5	874,-13254
chr6:35438475-35439378	chr6	+	35438623	35439185	True	NM_003214,NM_007104	chr6,chr6	-,+	TEAD3,RPL10A	25726,-2503
chr1:10532704-10533432	chr1	+	10532714	10533092	True	NM_213566,NM_004565,NM_004401	chr1,chr1,chr1	-,+,-	DFFA,PEX14,DFFA	-101,1910,-101
chr4:71396794-71397270	chr4	+	71396966	71397196	True	NM_144646,NM_212557	chr4,chr4	-,+	IGJ,AMTN	135202,-12719
chr1:182765891-182766582	chr1	+	182766199	182766604	True	NM_033345,NM_001200052,NM_001200050,NM_001200051,NM_001200056,NM_030769	chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,+,+,+	RGS8,NPL,NPL,NPL,NPL,NPL	-124132,-7672,-7672,-7672,-7672,-7672
chr11:77530530-77530750	chr11	+	77530552	77530768	True	NM_016578,NM_024684	chr11,chr11	-,+	RSF1,C11orf67	1162,1439
chr22:22336770-22336998	chr22	+	22336801	22336889	True	NM_007128,NM_003935	chr22,chr22	+,-	VPREB1,TOP3B	262310,308
chrX:34671924-34672128	chrX	+	34671925	34672175	True	NM_152631,NM_031442	chrX,chrX	+,-	FAM47B,TMEM47	288737,3280
chr6:137482980-137484507	chr6	+	137483149	137484507	True	NM_052962,NM_001008783	chr6,chr6	-,+	IL22RA2,SLC35D3	10328,-239798
chr19:19640744-19641519	chr19	+	19640960	19641516	True	NM_032037,NM_153221,NM_001190328,NM_198537	chr19,chr19,chr19,chr19	-,+,+,+	TSSK6,CILP2,YJEFN3,YJEFN3	-14491,7557,-1341,-1341
chr2:112639481-112641317	chr2	+	112639886	112641230	True	NM_022662,NM_006343	chr2,chr2	-,+	ANAPC1,MERTK	561,14960
chrX:56755981-56757711	chrX	+	56756259	56757646	True	NR_015367,NR_002308	chrX,chrX	+,-	LOC550643,LOC442454	-600,6429
chr12:50231363-50232420	chr12	+	50231423	50232342	True	NR_027500,NM_001037806,NM_181708,NR_027501,NR_027499	chr12,chr12,chr12,chr12,chr12	+,-,-,+,+	LOC100286844,NCKAP5L,BCDIN3D,LOC100286844,LOC100286844	-9148,-9215,4621,-9148,-9148
chr16:18470607-18470925	chr16	+	18470840	18470924	True	NR_036142,NR_003569	chr16,chr16	-,+	MIR3180-2,ABCC6P1	25250,111645
chr9:117351890-117352791	chr9	+	117351916	117352821	True	NM_015404,NM_004888	chr9,chr9	-,+	DFNB31,ATP6V1G1	-84180,-1980
chr7:104888625-104889107	chr7	+	104888698	104888858	True	NM_182931,NM_182691	chr7,chr7	+,-	MLL5,SRPK2	-234121,20671
chr22:43808391-43808958	chr22	+	43808580	43808890	True	NM_173050,NM_001044370	chr22,chr22	-,+	SCUBE1,MPPED1	-69225,-611
chr6:119462935-119463425	chr6	+	119463085	119463445	True	NM_001100411,NM_014034	chr6,chr6	-,+	FAM184A,ASF1A	6963,-247903
chr3:19211003-19212462	chr3	+	19211065	19212045	True	NM_001131010,NM_144633	chr3,chr3	-,+	SATB1,KCNH8	-730800,-21108
chr2:106362766-106363368	chr2	+	106362931	106363307	True	NM_003581,NM_001004722,NM_201557	chr2,chr2,chr2	+,+,-	NCK2,NCK2,FHL2	-1462,-1462,-307701
chr5:140736606-140737109	chr5	+	140736667	140737151	True	NM_032095,NM_018923,NM_018922,NM_032096,NM_032054,NM_018918,NM_032053,NM_005642,NM_018917	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,+,-,+	PCDHGB1,PCDHGB2,PCDHGB1,PCDHGB2,PCDHGA5,PCDHGA5,PCDHGA4,TAF7,PCDHGA4	-6890,2551,-6890,2551,6746,6746,-1950,-36316,-1950
chr14:65746906-65747125	chr14	+	65746918	65747028	True	NM_178155,NR_024334	chr14,chr14	+,-	FUT8,LOC645431	130811,132357
chr9:100937767-100938003	chr9	+	100937829	100938019	True	NM_018946,NM_003389	chr9,chr9	+,-	NANS,CORO2A	-118921,-2655
chr19:58193628-58194260	chr19	+	58193724	58194260	True	NM_001085384,NM_138347	chr19,chr19	-,+	ZNF154,ZNF551	26369,-418
chr20:47545328-47546475	chr20	+	47545394	47546517	True	NM_006420,NM_020820	chr20,chr20	+,-	ARFGEF2,PREX1	-7179,-100974
chr8:68256170-68257960	chr8	+	68256412	68257881	True	NM_024790,NM_006421	chr8,chr8	+,-	CSPP1,ARFGEF1	-279860,-500
chr17:11896995-11898580	chr17	+	11897164	11898389	True	NM_144680,NM_003010	chr17,chr17	-,+	ZNF18,MAP2K4	2357,25745
chr20:2362657-2364473	chr20	+	2363067	2364207	True	NR_003684,NM_198994	chr20,chr20	-,+	SNORD119,TGM6	79536,-1571
chr13:31780846-31782301	chr13	+	31781084	31782201	True	NM_194318,NM_006644	chr13,chr13	+,-	B3GALTL,HSPH1	-7025,-44967
chr1:216896850-216897282	chr1	+	216896989	216897275	True	NM_001438,NR_024099,NM_138796	chr1,chr1,chr1	-,-,+	ESRRG,ESRRG,SPATA17	-182,-194,907419
chr17:36904148-36904375	chr17	+	36904153	36904259	True	NM_007144,NM_002795	chr17,chr17	-,+	PCGF2,PSMB3	349,4742
chr1:150259070-150259305	chr1	+	150259145	150259335	True	NM_018997,NM_016022,NM_144697,NM_031901	chr1,chr1,chr1,chr1	+,-,+,+	MRPS21,APH1A,C1orf51,MRPS21	6933,-17613,-3967,6933
chr2:103101031-103101315	chr2	+	103101030	103101180	True	NM_001011552,NM_032718	chr2,chr2	+,-	SLC9A4,MFSD9	-11319,252207
chr8:121138495-121138964	chr8	+	121138579	121138939	True	NM_024094,NM_021110	chr8,chr8	-,+	DSCC1,COL14A1	-270409,-1278
chr7:2878100-2879014	chr7	+	2878638	2878844	True	NM_133463,NM_007353	chr7,chr7	+,-	AMZ1,GNA12	-159533,5167
chr6:15012303-15013278	chr6	+	15012627	15013201	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	233325,650138
chr17:17141976-17142377	chr17	+	17142064	17142287	True	NM_144997,NM_020201,NM_144606	chr17,chr17,chr17	-,+,-	FLCN,NT5M,FLCN	-1562,64392,-1562
chr12:52345821-52346268	chr12	+	52345832	52346120	True	NM_020328,NM_001013690,NM_004302,NM_020327	chr12,chr12,chr12,chr12	+,-,+,+	ACVR1B,FIGNL2,ACVR1B,ACVR1B	-432,-120131,-432,1043
chr19:33688854-33689722	chr19	+	33688903	33689623	True	NM_002333,NM_019849	chr19,chr19	+,-	LRP3,SLC7A10	-3355,27183
chr16:8711681-8713499	chr16	+	8711750	8713404	True	NM_001146336,NM_024109	chr16,chr16	-,+	TMEM114,METTL22	-89524,2122
chrX:64887861-64888183	chrX	+	64887937	64888077	True	NM_002444,NR_033742	chrX,chrX	+,-	MSN,FKSG43	-477,-115636
chr5:40753874-40755128	chr5	+	40753925	40755162	True	NM_012382,NM_000958	chr5,chr5	-,+	TTC33,PTGER4	968,-73944
chr19:4344594-4344826	chr19	+	4344657	4344729	True	NM_001159846,NM_001013841,NM_032868,NM_017720	chr19,chr19,chr19,chr19	+,-,+,-	MPND,STAP2,MPND,STAP2	-1184,-5810,-1184,-5810
chr4:119270531-119270877	chr4	+	119270585	119270880	True	NR_002963,NM_003619	chr4,chr4	+,-	SNORA24,PRSS12	-70303,3093
chr3:160264718-160265965	chr3	+	160264725	160265861	True	NM_002268,NM_025047	chr3,chr3	-,+	KPNA4,ARL14	17571,129086
chr3:128781017-128781516	chr3	+	128781202	128781442	True	NM_001204886,NM_000174	chr3,chr3	-,+	RAB43,GP9	59255,-1608
chr3:93706783-93708251	chr3	+	93706854	93708220	True	NM_144996,NM_000313,NM_182896,NM_001174151,NM_001174150,NR_033427	chr3,chr3,chr3,chr3,chr3,chr3	+,-,+,+,+,+	ARL13B,PROS1,ARL13B,ARL13B,ARL13B,ARL13B	-7934,-13920,-7934,-7934,-7934,-7934
chrY:6114669-6115853	chrY	+	6114920	6115409	True	NM_022573,NR_001540,NR_003593	chrY,chrY,chrY	+,-,-	TSPY2,TTTY23,TTTY23B	-707,-3269,-3269
chrY:6114669-6115853	chrY	+	9305636	9305715	False	NM_001197242,NR_001553,NM_003308	chrY,chrY,chrY	+,-,+	TSPY1,FAM197Y2P,TSPY1	-1129,-3682,-1129
chrY:6114669-6115853	chrY	+	9386730	9387290	False	NR_001553,NM_001077697	chrY,chrY	-,+	FAM197Y2P,TSPY3	-23853,-21298
chrY:6114669-6115853	chrY	+	9366561	9366640	False	NR_001553,NM_001077697	chrY,chrY	-,+	FAM197Y2P,TSPY3	-3684,-1129
chrY:6114669-6115853	chrY	+	9325966	9326045	False	NR_001553,NM_003308	chrY,chrY	-,+	FAM197Y2P,TSPY1	-3703,-21459
chrY:6114669-6115853	chrY	+	9346248	9346327	False	NR_001553,NM_001077697	chrY,chrY	-,+	FAM197Y2P,TSPY3	16609,19161
chrY:6114669-6115853	chrY	+	9237102	9237181	False	NR_001553,NM_001077697,NM_001164471	chrY,chrY,chrY	-,+,+	FAM197Y2P,TSPY3,TSPY4	-24031,-1129,-1083
chrY:6114669-6115853	chrY	+	9176163	9176242	False	NR_001546,NM_001164471	chrY,chrY	-,+	TTTY20,TSPY4	-3722,19209
chrY:6114669-6115853	chrY	+	9216756	9216835	False	NR_001553,NM_001164471	chrY,chrY	-,+	FAM197Y2P,TSPY4	-3685,-1082
chrY:6114669-6115853	chrY	+	9196478	9196557	False	NR_001553,NM_001164471	chrY,chrY	-,+	FAM197Y2P,TSPY4	-3687,-1083
chr15:51201229-51201563	chr15	+	51201304	51201523	True	NM_032802,NM_007347	chr15,chr15	-,+	SPPL2A,AP4E1	-143394,-409
chr20:33873353-33873579	chr20	+	33873494	33873609	True	NM_006690,NM_002212,NM_181466,NM_181468,NM_178468	chr20,chr20,chr20,chr20,chr20	+,-,-,-,-	MMP24,EIF6,EIF6,EIF6,FAM83C	-59008,-900,-900,-988,6667
chr2:16079943-16080293	chr2	+	16079990	16080195	True	NR_026766,NM_005378	chr2,chr2	-,+	MYCNOS,MYCN	1700,487
chr4:15009028-15010028	chr4	+	15009039	15010077	True	NM_001177384,NM_001177381,NM_001177383,NM_001177382,NM_182646,NM_001193534,NM_182485	chr4,chr4,chr4,chr4,chr4,chr4,chr4	+,+,+,+,+,-,+	CPEB2,CPEB2,CPEB2,CPEB2,CPEB2,FBXL5,CPEB2	-4800,-4800,-4800,-4800,-4800,647008,-4800
chr21:30744989-30746481	chr21	+	30745483	30746198	True	NR_027655,NM_006585	chr21,chr21	+,-	BACH1,CCT8	-67975,-299473
chr17:28622514-28623107	chr17	+	28622517	28623072	True	NM_001304,NM_000386	chr17,chr17	+,-	CPD,BLMH	82869,-3333
chr12:10282375-10282800	chr12	+	10282580	10282837	True	NM_197949,NM_197948,NM_153022,NM_197954,NM_022570,NM_197950,NM_197947	chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,-,+,-,-,-,-	CLEC7A,CLEC7A,C12orf59,CLEC7A,CLEC7A,CLEC7A,CLEC7A	82,82,48719,82,82,82,82
chr14:24772673-24772963	chr14	+	24772673	24772930	True	NM_001164692,NM_174913,NM_019839,NM_138452,NM_001136050,NM_001143919,NM_181657,NM_014430	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,-,-,+,+,-	LTB4R2,C14orf21,LTB4R2,DHRS1,DHRS1,LTB4R,LTB4R,CIDEB	6426,-3626,6426,-4007,-3634,7774,9382,7696
chr9:136855590-136855866	chr9	+	136855676	136855844	True	NM_003371,NR_015427,NM_001134398	chr9,chr9,chr9	-,+,-	VAV2,NCRNA00094,VAV2	1652,34716,1652
chr19:17830873-17831203	chr19	+	17831061	17831235	True	NM_001080421,NM_018174	chr19,chr19	-,+	UNC13A,MAP1S	-32053,-809
chr17:77478032-77479947	chr17	+	77478284	77479972	True	NM_178543,NM_001082575	chr17,chr17	+,-	ENPP7,RBFOX3	224909,131
chr2:27194056-27194355	chr2	+	27194216	27194354	True	NM_012326,NM_001134693	chr2,chr2	+,-	MAPRE3,OST4	-742,100263
chr11:1141216-1142944	chr11	+	1141379	1142925	True	NM_002457,NM_005961	chr11,chr11	+,-	MUC2,MUC6	-66555,-104673
chr17:39521590-39522932	chr17	+	39521856	39522852	True	NM_030975,NM_002279	chr17,chr17	+,-	KRTAP9-9,KRT33B	-110279,3245
chr20:33147529-33147741	chr20	+	33147596	33147706	True	NM_080476,NM_032514	chr20,chr20	-,+	PIGU,MAP1LC3A	117433,-1128
chr20:45523694-45523984	chr20	+	45523896	45524004	True	NM_005244,NM_172110,NM_033550	chr20,chr20,chr20	+,+,-	EYA2,EYA2,TP53RK	-684,-684,-205620
chr3:122298545-122299497	chr3	+	122298899	122299430	True	NM_031458,NM_001113523	chr3,chr3	-,+	PARP9,PARP15	-15376,-2514
chr9:95819233-95820304	chr9	+	95819243	95820001	True	NM_004148,NM_145006	chr9,chr9	-,+	NINJ1,SUSD3	76619,987
chr21:43637471-43637708	chr21	+	43637577	43637647	True	NM_004915,NM_207174,NM_003226,NM_016818,NM_207629	chr21,chr21,chr21,chr21,chr21	+,+,-,+,+	ABCG1,ABCG1,TFF3,ABCG1,ABCG1	1619,2360,98109,1619,-1441
chr6:165486015-165487087	chr6	+	165486025	165487051	True	NM_144980,NR_027284	chr6,chr6	-,+	C6orf118,LOC441177	236120,913987
chr12:109530769-109531223	chr12	+	109530892	109531250	True	NM_001205179,NM_080911,NM_001205180,NM_001145375,NM_001145374,NM_003362,NM_001001655,NR_026930,NR_026931	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,+,-,-,-,+,-,-,-	ALKBH2,UNG,ALKBH2,ALKBH2,ALKBH2,UNG,ALKBH2,ALKBH2,ALKBH2	93,4148,93,93,93,4672,93,93,93
chr5:34209823-34211740	chr6	+	26884763	26884822	True	NR_003504,NR_026775	chr6,chr6	-,+	GUSBL1,NCRNA00240	39570,39949
chr5:159544488-159545625	chr5	+	159544832	159545492	True	NM_001130864,NM_052927,NM_001130958	chr5,chr5,chr5	-,-,+	PWWP2A,PWWP2A,FABP6	1010,1010,68881
chr12:106533734-106534178	chr12	+	106533738	106534097	True	NM_014840,NM_152772	chr12,chr12	-,+	NUAK1,TCP11L2	1,162483
chr9:102860789-102861015	chr9	+	102860808	102861060	True	NM_015051,NM_014425,NM_183245	chr9,chr9,chr9	-,+,+	ERP44,INVS,INVS	320,450,450
chr6:17988504-17989196	chr6	+	17988567	17988921	True	NM_001105568,NM_153042,NM_022113,NM_001105566,NM_001105567	chr6,chr6,chr6,chr6,chr6	-,+,-,-,-	KIF13A,KDM1B,KIF13A,KIF13A,KIF13A	-768,166697,-768,-768,-768
chr1:155178511-155178794	chr1	+	155178532	155178806	True	NM_002455,NM_007112,NM_198883	chr1,chr1,chr1	+,-,+	MTX1,THBS3,MTX1	-93,-842,-93
chr20:1368395-1368859	chr20	+	1368624	1368912	True	NR_037661,NM_000801,NM_014723,NM_054014,NM_001199786	chr20,chr20,chr20,chr20,chr20	-,-,+,-,-	FKBP1A-SDCBP2,FKBP1A,SNPH,FKBP1A,FKBP1A	4960,4960,-121716,4960,4960
chr1:176449730-176450483	chr1	+	176449841	176450342	True	NM_020318,NM_022457	chr1,chr1	+,-	PAPPA2,RFWD2	-17585,-273471
chr5:180074660-180074895	chr5	+	180074805	180074865	True	NM_002020,NM_182925,NM_015455	chr5,chr5,chr5	-,-,+	FLT4,FLT4,CNOT6	1809,1809,-153440
chr15:58725463-58725964	chr15	+	58725515	58725958	True	NR_002927,NM_000236	chr15,chr15	-,+	HSP90AB4P,LIPC	259417,-1398
chr9:95859420-95860412	chr9	+	95859441	95860187	True	NM_032310,NM_004148	chr9,chr9	+,-	C9orf89,NINJ1	-1044,36433
chr6:16762968-16763257	chr6	+	16762972	16763224	True	NM_001128164,NM_001190766,NM_000332	chr6,chr6,chr6	-,+,-	ATXN1,FLJ23152,ATXN1	-1251,339264,-1251
chr2:105945340-105945684	chr2	+	105945339	105945645	True	NM_001142621,NM_004257,NM_024093	chr2,chr2,chr2	-,-,+	TGFBRAP1,TGFBRAP1,C2orf49	553,553,8367
chr9:114424305-114424511	chr9	+	114424331	114424457	True	NM_001017998,NR_034087,NM_001198664	chr9,chr9,chr9	+,-,+	GNG10,C9orf29,GNG10	-531,-48498,-531
chr10:116168581-116168971	chr10	+	116168580	116168966	True	NM_198496,NM_032550,NM_001001936	chr10,chr10,chr10	+,-,-	VWA2,AFAP1L2,AFAP1L2	-169614,-4065,-4065
chr14:74545321-74546040	chr14	+	74545737	74545883	True	NM_005589,NM_001024674	chr14,chr14	-,+	ALDH6A1,LIN52	5371,5772
chr1:228596521-228596901	chr1	+	228596593	228596917	True	NM_001024940,NM_175055,NM_001134855,NM_145214,NM_016102	chr1,chr1,chr1,chr1,chr1	-,+,-,-,-	TRIM17,HIST3H2BB,TRIM17,TRIM11,TRIM17	7716,48890,7716,-2076,7716
chr4:128649438-128651386	chr4	+	128649529	128651311	True	NM_152778,NM_031291	chr4,chr4	-,+	MFSD8,SLC25A31	235878,243
chr9:115089609-115091410	chr9	+	115089941	115091375	True	NM_005156,NM_001163788,NM_001195822,NM_001163790	chr9,chr9,chr9,chr9	-,-,+,-	ROD1,ROD1,HSDL2,ROD1	4627,4627,50813,4627
chr11:129869011-129870029	chr11	+	129869046	129869791	True	NM_199437,NR_024233,NM_020228	chr11,chr11,chr11	-,+,-	PRDM10,NCRNA00167,PRDM10	2998,2727,2998
chr22:43547831-43548088	chr22	+	43547896	43548034	True	NM_007311,NM_014507,NM_173467,NM_000714	chr22,chr22,chr22,chr22	+,-,-,+	TSPO,MCAT,MCAT,TSPO	-412,-8493,-8493,-412
chr2:73338732-73339074	chr2	+	73338736	73339038	True	NM_015470,NM_001134462	chr2,chr2	-,+	RAB11FIP5,NOTO	1158,90347
chr14:70653917-70654209	chr14	+	70654062	70654132	True	NM_058240,NM_182932,NM_033262,NM_003813,NM_183002	chr14,chr14,chr14,chr14,chr14	-,-,-,+,-	SLC8A3,SLC8A3,SLC8A3,ADAM21,SLC8A3	1713,1713,1713,270084,1713
chr20:25128535-25128745	chr20	+	25128547	25128785	True	NR_027092,NR_027093,NR_027091,NM_001114089	chr20,chr20,chr20,chr20	-,-,-,+	LOC284798,LOC284798,LOC284798,ENTPD6	626,82,691,47553
chr1:229695397-229696033	chr1	+	229695430	229696004	True	NM_012089,NM_014777	chr1,chr1	-,+	ABCB10,URB2	-988,65976
chr3:80825734-80826252	chr3	+	80825768	80826144	True	NM_001128929,NM_000158	chr3,chr3	+,-	ROBO2,GBE1	-3678669,984869
chr22:26868488-26868745	chr22	+	26868492	26868785	True	NM_152841,NM_001013694	chr22,chr22	-,+	HPS4,SRRD	6817,11064
chr19:50399626-50399984	chr19	+	50399625	50399687	True	NM_152899,NM_024682	chr19,chr19	-,+	IL4I1,TBC1D17	510,-18994
chr14:54974327-54974928	chr14	+	54974890	54974969	True	NM_004124,NM_006568	chr14,chr14	-,+	GMFB,CGRRF1	-19146,1617
chrX:100643502-100645472	chrX	+	100643503	100645404	True	NM_000061,NM_021029,NM_001199974,NM_001199972,NM_001199973	chrX,chrX,chrX,chrX,chrX	-,+,+,+,+	BTK,RPL36A,RPL36A-HNRNPH2,RPL36A,RPL36A-HNRNPH2	-2291,473,473,473,473
chr3:197676774-197677132	chr3	+	197676800	197677038	True	NM_001134435,NM_032263,NM_000996	chr3,chr3,chr3	-,-,+	IQCG,IQCG,RPL35A	-4,9898,13
chr14:53199284-53199935	chr14	+	53199284	53199994	True	NM_014584,NM_001130701,NM_145251	chr14,chr14,chr14	-,+,+	ERO1L,STYX,STYX	-36865,-2456,-2456
chr3:48645348-48646665	chr3	+	48645708	48646712	True	NM_033629,NM_003365	chr3,chr3	+,-	TREX1,UQCRC1	-138547,436
chrX:37027116-37027548	chrX	+	37027280	37027590	True	NM_006520,NM_001013736	chrX,chrX	-,+	DYNLT3,FAM47C	679349,-899
chr22:29136992-29137868	chr22	+	29137327	29137729	True	NM_007194,NM_001005735,NM_172002,NM_145862	chr22,chr22,chr22,chr22	-,-,+,-	CHEK2,CHEK2,HSCB,CHEK2	143,143,313,143
chr12:114841989-114842534	chr12	+	114842017	114842514	True	NM_181486,NM_080718,NM_080717,NM_138432,NM_000192	chr12,chr12,chr12,chr12,chr12	-,-,-,+,-	TBX5,TBX5,TBX5,SDSL,TBX5	1425,-314,3783,-981852,3783
chr6:111581609-111582003	chr6	+	111581724	111582028	True	NM_153369,NR_002932	chr6,chr6	+,-	KIAA1919,GSTM2P1	-1293,-212967
chr8:98880560-98880771	chr8	+	98880622	98880720	True	NR_002581,NM_030583,NM_002380	chr8,chr8,chr8	-,+,+	SNORA72,MATN2,MATN2	173775,590,590
chr12:51812419-51814082	chr12	+	51812701	51813943	True	NM_001039960,NM_004858,NM_007210	chr12,chr12,chr12	+,+,-	SLC4A8,SLC4A8,GALNT6	4650,4650,-27501
chr1:157733076-157733848	chr1	+	157733341	157733435	True	NM_030764,NM_018240	chr1,chr1	-,+	FCRL2,KIRREL	13543,229627
chr2:11809330-11809553	chr2	+	11809346	11809550	True	NM_012344,NM_145693	chr2,chr2	-,+	NTSR2,LPIN1	829,77189
chr18:5891823-5892048	chr18	+	5891919	5892081	True	NM_001080209,NR_015389	chr18,chr18	-,+	TMEM200C,LOC339290	72,-653871
chr7:150389235-150391105	chr7	+	150389346	150391128	True	NM_015660,NR_024115	chr7,chr7	+,-	GIMAP2,GIMAP6	-6604,-59666
chr15:59904808-59905951	chr15	+	59904847	59905531	True	NM_004751,NM_004492	chr15,chr15	+,-	GCNT3,GTF2A2	-916,44264
chr6:105846955-105847253	chr6	+	105847002	105847270	True	NR_037157,NM_002726	chr6,chr6	+,-	C6orf112,PREP	-261493,3779
chr16:4986074-4986365	chr16	+	4986074	4986150	True	NM_014692,NM_002705	chr16,chr16	+,-	SEC14L5,PPL	22167,1036
chr8:145148280-145149072	chr8	+	145148354	145148832	True	NM_001916,NM_030974	chr8,chr8	+,-	CYC1,SHARPIN	1127,10358
chr22:37213247-37215080	chr22	+	37213577	37214837	True	NM_000631,NM_002854	chr22,chr22	+,-	NCF4,PVALB	42192,730
chr1:110694564-110694880	chr1	+	110694626	110694916	True	NM_006492,NM_001010898	chr1,chr1	-,+	ALX3,SLC6A17	-81304,-1546
chr22:42197036-42197327	chr22	+	42197046	42197314	True	NM_001003796,NM_024821	chr22,chr22	-,+	NHP2L1,CCDC134	-112133,-419
chr20:34127522-34129458	chr20	+	34127567	34129480	True	NM_015966,NM_198398,NM_001145350	chr20,chr20,chr20	+,+,-	ERGIC3,ERGIC3,C20orf173	297,297,-10086
chr11:65771495-65771939	chr11	+	65771589	65771907	True	NM_003860,NM_001143985,NM_032325,NM_001323	chr11,chr11,chr11,chr11	+,+,-,+	BANF1,BANF1,EIF1AD,CST6	-2098,-2098,-2011,7554
chr2:232649046-232649732	chr2	+	232649211	232649492	True	NM_022730,NM_002601	chr2,chr2	+,-	COPS7B,PDE6D	1669,-3237
chr8:146018985-146019630	chr8	+	146019150	146019586	True	NM_000973,NM_033301,NM_030580,NM_213605	chr8,chr8,chr8,chr8	-,-,-,+	RPL8,RPL8,ZNF34,ZNF517	-1345,-1421,-6425,4674
chr1:173787128-173788092	chr1	+	173787330	173787983	True	NM_033319,NM_018122,NM_001127181,NM_001171182	chr1,chr1,chr1,chr1	-,+,-,-	CENPL,DARS2,CENPL,CENPL	5851,5813,5851,5344
chr14:104553211-104553431	chr14	+	104553239	104553441	True	NM_004894,NM_001080464	chr14,chr14	-,+	C14orf2,ASPG	-165336,-1267
chr11:35881537-35882767	chr11	+	35881960	35882682	True	NM_015430,NM_174902	chr11,chr11	-,+	PAMR1,LDLRAD3	-334784,82929
chr1:160376337-160376811	chr1	+	160376358	160376502	True	NM_004371,NM_020335	chr1,chr1	-,+	COPA,VANGL2	-63004,-6045
chr22:39757658-39758146	chr22	+	39757660	39757992	True	NM_001033853,NM_145738	chr22,chr22	-,+	RPL3,SYNGR1	-41990,2182
chr12:19411589-19412193	chr12	+	19411829	19412028	True	NM_019012,NM_033123	chr12,chr12	+,-	PLEKHA5,PLCZ1	-129265,-520911
chr1:27150988-27152276	chr1	+	27151164	27152091	True	NM_018066,NM_032283	chr1,chr1	-,+	GPN2,ZDHHC18	64828,1109
chr3:43662124-43662889	chr3	+	43662360	43662897	True	NM_016006,NM_001204832,NM_001204834,NM_001204831,NM_018075,NM_001204833	chr3,chr3,chr3,chr3,chr3,chr3	+,-,-,-,-,-	ABHD5,ANO10,ANO10,ANO10,ANO10,ANO10	69477,713,713,713,713,713
chr19:51870620-51871344	chr19	+	51870682	51870822	True	NM_001985,NM_152353,NR_033235,NM_005601	chr19,chr19,chr19,chr19	-,-,+,-	ETFB,CLDND2,LOC100129083,NKG7	-1010,1485,48337,5188
chr1:27997132-27998054	chr1	+	27997210	27997893	True	NM_022872,NM_002038,NM_022873,NM_001143912	chr1,chr1,chr1,chr1	-,-,-,+	IFI6,IFI6,IFI6,FAM76A	884,884,884,54596
chr7:99451338-99451920	chr7	+	99451612	99451683	True	NM_001005276,NM_057096	chr7,chr7	-,+	OR2AE1,CYP3A43	23034,-26041
chr22:42477462-42478328	chr22	+	42477802	42478103	True	NM_033318,NM_002490,NM_001002034,NR_034118	chr22,chr22,chr22,chr22	+,-,+,+	C22orf32,NDUFA6,FAM109B,LOC100132273	-2158,8836,-7602,8833
chr15:75018903-75019201	chr15	+	75018992	75019236	True	NM_000499,NM_000761	chr15,chr15	-,+	CYP1A1,CYP1A2	-1115,21947
chr8:26167719-26168816	chr8	+	26167876	26168851	True	NM_001177591,NM_007257	chr8,chr8	+,-	PPP2R2A,PNMA2	-17207,202687
chr6:134211184-134212185	chr6	+	134211188	134212000	True	NM_003206,NM_145176,NM_198392	chr6,chr6,chr6	+,-,+	TCF21,SLC2A12,TCF21	-979,161841,-980
chr11:111781267-111782605	chr11	+	111781312	111782614	True	NR_037651,NM_001885,NM_080659,NM_001541	chr11,chr11,chr11,chr11	+,-,+,+	HSPB2-C11ORF52,CRYAB,C11orf52,HSPB2	845,-91,6986,845
chr1:85742592-85742913	chr1	+	85742634	85742959	True	NM_003921,NM_145172	chr1,chr1	-,+	BCL10,WDR63	-47,-214692
chr14:105155610-105155810	chr14	+	105155609	105155783	True	NM_207379,NM_032714,NM_001031714,NM_022489	chr14,chr14,chr14,chr14	-,+,+,+	TMEM179,INF2,INF2,INF2	-84512,159,159,159
chr1:113008197-113008853	chr1	+	113008253	113008851	True	NM_004185,NR_036210	chr1,chr1	+,-	WNT2B,MIR4256	1188,-3798
chr2:130876240-130876827	chr2	+	130876282	130876531	True	NM_001099771,NR_033903	chr2,chr2	-,+	POTEF,LOC285103	10319,10664
chr2:130876240-130876827	chr2	-	131977532	131977781	False	NM_001009993,NM_001083538	chr2,chr2	-,+	FAM168B,POTEE	-126528,-1664
chr12:102092198-102092400	chr12	+	102092319	102092421	True	NM_020244,NM_001177948	chr12,chr12	+,-	CHPT1,SYCP3	-953,40879
chr4:57845306-57845590	chr4	+	57845341	57845559	True	NM_032313,NM_000938	chr4,chr4	-,+	C4orf14,POLR2B	-1515,-283
chr9:131643014-131643518	chr9	+	131643014	131643369	True	NM_001127245,NM_001127244,NM_019594,NM_001122672,NM_001122671,NM_004059	chr9,chr9,chr9,chr9,chr9,chr9	+,+,+,-,-,-	LRRC8A,LRRC8A,LRRC8A,CCBL1,CCBL1,CCBL1	1021,1411,1021,1035,1035,1035
chr12:104365195-104366108	chr12	+	104365362	104365871	True	NM_003211,NM_001135570	chr12,chr12	+,-	TDG,C12orf73	-5820,-14369
chr1:161235686-161237661	chr1	+	161235855	161237488	True	NM_001077469,NM_001102566	chr1,chr1	-,+	NR1I3,PCP4L1	-27855,-7389
chr18:77722556-77723030	chr18	+	77722570	77723075	True	NM_001136180,NM_025078	chr18,chr18	+,-	HSBP1L1,PQLC1	1506,-10917
chr14:21500102-21501133	chr14	+	21500185	21501163	True	NM_001012264,NM_201536,NM_201537,NM_201535,NM_173846,NM_201541,NM_016250,NM_201540,NM_032572,NM_201538,NM_201539	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	-,-,-,-,+,-,-,-,+,-,-	RNASE13,NDRG2,NDRG2,NDRG2,TPPP2,NDRG2,NDRG2,NDRG2,RNASE7,NDRG2,NDRG2	1831,-6250,-6250,-6250,-1891,-6921,-6250,-6921,9221,-6921,-6921
chr22:39899153-39900384	chr22	+	39899309	39900359	True	NM_019008,NM_194326	chr22,chr22	+,-	SMCR7L,RPS19BP1	-1084,28551
chrX:54560702-54561592	chrX	+	54560738	54561546	True	NM_004463,NM_019067,NM_001184819	chrX,chrX,chrX	-,+,+	FGD1,GNL3L,GNL3L	-38139,-4145,-4145
chr3:148416284-148417193	chr3	+	148416284	148417216	True	NM_000685,NM_031850,NM_009585,NM_003071,NM_004835	chr3,chr3,chr3,chr3,chr3	+,+,+,-,+	AGTR1,AGTR1,AGTR1,HLTF,AGTR1	-677,-677,-677,387175,-677
chr19:14180841-14181408	chr19	+	14181125	14181399	True	NR_024282,NM_001145028	chr19,chr19	+,-	LOC113230,PALM3	2421,-11154
chr1:41250217-41250743	chr1	+	41250300	41250682	True	NM_004700,NM_172163,NM_133467	chr1,chr1,chr1	+,+,-	KCNQ4,KCNQ4,CITED4	-667,-667,77386
chr7:128765458-128766334	chr7	+	128765686	128766188	True	NR_002144,NR_034053	chr7,chr7	+,-	LOC407835,TNPO3	136,-70459
chr16:31454213-31454479	chr16	+	31454218	31454506	True	NM_001136509,NM_001105247	chr16,chr16	-,+	ZNF843,ARMC5	10,15810
chr10:98479688-98480101	chr10	+	98479775	98480029	True	NM_152309,NM_001170765	chr10,chr10	-,+	PIK3AP1,LCOR	300,111987
chr2:170439763-170440322	chr2	+	170439934	170440230	True	NM_004792,NM_024622	chr2,chr2	+,-	PPIG,FASTKD1	619,-9510
chr1:228395345-228395617	chr1	+	228395344	228395646	True	NM_181465,NM_001098623,NM_052843	chr1,chr1,chr1	-,+,+	MRPL55,OBSCN,OBSCN	-98331,214,214
chr17:65822365-65822753	chr17	+	65822365	65822791	True	NM_004459,NM_182641,NM_181655	chr17,chr17,chr17	+,+,-	BPTF,BPTF,C17orf58	-636,-636,167024
chr17:65822365-65822753	chr17	+	30335430	30335480	False	NM_018428,NM_052888	chr17,chr17	-,+	UTP6,LRRC37B	-106701,12674
chr14:37052540-37052820	chr14	+	37052541	37052869	True	NM_006194,NM_014360	chr14,chr14	+,-	PAX9,NKX2-8	73903,-755
chr3:53290069-53290930	chr3	+	53290199	53290401	True	NM_001064,NM_001135055,NM_212539	chr3,chr3,chr3	-,-,+	TKT,TKT,PRKCD	-69,-69,-95027
chr14:65166534-65166850	chr14	+	65166616	65166683	True	NM_015549,NM_001024858	chr14,chr14	+,-	PLEKHG3,SPTB	4509,123236
chr8:144098435-144098738	chr8	+	144098434	144098666	True	NM_002346,NM_001127213,NR_026913	chr8,chr8,chr8	+,+,-	LY6E,LY6E,LOC100133669	1235,1235,1191
chr3:193094528-193095448	chr3	+	193094534	193095363	True	NR_026877,NM_198505	chr3,chr3	+,-	MGC2889,ATP13A5	-135017,1201
chr12:10825496-10825830	chr12	+	10825543	10825708	True	NM_005042,NM_018423	chr12,chr12	+,-	PRH2,STYK1	256125,1240
chr11:803573-803779	chr11	+	803607	803819	True	NM_145887,NM_145886,NM_024698,NM_001191060,NM_001191061,NM_001004,NR_002585	chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,-,+,+	LRDD,LRDD,SLC25A22,SLC25A22,SLC25A22,RPLP2,SNORA52	1481,1481,-7344,-5612,-5338,6116,7861
chr17:27049119-27050509	chr17	+	27049490	27050390	True	NM_001144942,NR_024575,NR_024579,NM_178170,NM_000984,NR_000014,NM_001144943,NM_031934,NR_000010,NR_000013,NM_138463,NM_001142625,NM_001160407,NM_001142624,NR_000009	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,+,+,+,-,-,+,+,-,-,-,-,+	RAB34,RAB34,RAB34,NEK8,RPL23A,SNORD42A,RAB34,RAB34,SNORD4A,SNORD42B,TLCD1,RAB34,TLCD1,RAB34,SNORD4B	-4582,-4239,-4239,5441,-2541,56,-4204,-4582,59,-1973,2890,-4204,3609,-4204,308
chr13:103425375-103425684	chr13	+	103425375	103425531	True	NM_001159596,NM_138779	chr13,chr13	+,-	BIVM,C13orf27	25867,668
chr2:43056190-43056747	chr2	+	43056274	43056788	True	NM_020744,NM_012205	chr2,chr2	+,-	MTA3,HAAO	-260654,-36523
chr1:236677522-236678246	chr1	+	236677577	236678016	True	NM_201545,NM_201544,NM_201543,NR_034040,NM_006499	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	LGALS8,LGALS8,LGALS8,LOC100287902,LGALS8	3497,9010,8722,9849,8722
chr3:124606644-124606921	chr3	+	124606651	124606711	True	NM_002213,NR_033437	chr3,chr3	-,+	ITGB5,UMPS	-507,-157489
chr5:71798670-71799061	chr5	+	71798999	71799101	True	NM_024754,NM_152625	chr5,chr5	+,-	PTCD2,ZNF366	-182867,4212
chr21:42735264-42735502	chr21	+	42735316	42735482	True	NM_002463,NM_001135099	chr21,chr21	+,-	MX2,TMPRSS2	-1417,144570
chr6:43858399-43858672	chr6	+	43858434	43858582	True	NR_024478,NM_018135	chr6,chr6	+,-	LOC100132354,MRPS18A	182,-202885
chr15:45249862-45251096	chr15	+	45249865	45251040	True	NM_014080,NM_152448	chr15,chr15	-,+	DUOX2,C15orf43	155370,-1013
chr12:8088401-8089620	chr12	+	8088473	8089504	True	NM_006931,NM_018416	chr12,chr12	-,+	SLC2A3,FOXJ2	13,95854
chr14:102197774-102199230	chr14	+	102197929	102199163	True	NR_026774,NR_031649	chr14,chr14	+,-	NCRNA00239,MIR1247	-1206,-171170
chr10:4863219-4863523	chr10	+	4863223	4863505	True	NM_001040177,NR_026743	chr10,chr10	+,-	AKR1E2,tAKR	4896,95010
chr19:58337074-58338023	chr19	+	58337158	58337974	True	NR_024162,NM_001204818	chr19,chr19	-,+	FKBP1AP1,LOC100293516	906,3687
chr6:14958707-14960570	chr6	+	14958935	14960027	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	286499,703312
chr6:167796562-167797071	chr6	+	167796746	167797040	True	NM_004610,NM_031949	chr6,chr6	-,+	TCP10,TTLL2	1008,-58224
chr6:167796562-167797071	chr6	-	167585037	167585087	False	NM_005299,NM_001145121	chr6,chr6	-,+	GPR31,TCP10L2	-13718,-1007
chr1:11163058-11164150	chr1	+	11163230	11164055	True	NM_021146,NM_002685,NM_001001998	chr1,chr1,chr1	+,-,-	ANGPTL7,EXOSC10,EXOSC10	85342,-3292,-3292
chr14:105959228-105960831	chr14	+	105959316	105960840	True	NM_001311,NM_001519,NM_001198983,NM_001134876,NM_001134877,NM_001134875	chr14,chr14,chr14,chr14,chr14,chr14	+,-,+,+,+,+	CRIP1,BRF1,C14orf80,C14orf80,C14orf80,C14orf80	-6111,-191987,-3176,-1782,-2848,-1782
chr2:27192365-27192706	chr2	+	27192416	27192663	True	NM_012326,NM_001134693	chr2,chr2	+,-	MAPRE3,OST4	861,101955
chr5:80506366-80506901	chr5	+	80506385	80506704	True	NR_034121,NR_002754,NR_002755	chr5,chr5,chr5	-,+,+	LOC100131067,RNU5E,RNU5D	90735,-4974,-4973
chr20:25127538-25127800	chr20	+	25127615	25127765	True	NR_027092,NR_027093,NR_027091,NM_001114089	chr20,chr20,chr20,chr20	-,-,-,+	LOC284798,LOC284798,LOC284798,ENTPD6	1646,914,1711,48573
chr16:1461547-1462778	chr16	+	1461955	1462773	True	NM_032520,NM_001193388,NM_001037125	chr16,chr16,chr16	+,-,-	GNPTG,UNKL,UNKL	-60106,1982,1982
chr16:187141-187639	chr16	+	187362	187438	True	NM_001039476,NM_001077350,NM_005332	chr16,chr16,chr16	-,-,+	NPRL3,NPRL3,HBZ	1222,1284,15415
chr12:62860015-62860428	chr12	+	62860223	62860428	True	NM_175895,NM_015026	chr12,chr12	-,+	C12orf61,MON2	136837,168
chr8:4852652-4853008	chr8	+	4852745	4853045	True	NM_033225,NM_001172574	chr8,chr8	-,+	CSMD1,MCPH1	-417,1411067
chr1:54664297-54665213	chr1	+	54664587	54665158	True	NM_001031672,NM_016491	chr1,chr1	-,+	CYB5RL,MRPL37	639,681
chr4:80243932-80244694	chr4	+	80243992	80244569	True	NM_032693,NR_026555	chr4,chr4	-,+	NAA11,GDEP	2655,504055
chr8:101964414-101964647	chr8	+	101964494	101964693	True	NM_145690,NM_001135702,NM_001135701,NM_001135700,NM_003406,NM_001135699,NR_033962	chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,-,-,+	YWHAZ,YWHAZ,YWHAZ,YWHAZ,YWHAZ,YWHAZ,FLJ42969	-137,-1695,-934,-934,980,578,99588
chr2:96989315-96990966	chr2	+	96989676	96990822	True	NM_014014,NM_001163523,NM_001163524,NM_178495,NM_001008949	chr2,chr2,chr2,chr2,chr2	-,+,+,+,+	SNRNP200,ITPRIPL1,ITPRIPL1,ITPRIPL1,ITPRIPL1	-18369,246,1122,1112,239
chr1:38100861-38101809	chr1	+	38100978	38101844	True	NM_001038633,NM_018101	chr1,chr1	-,+	RSPO1,CDCA8	-487,56314
chr15:38984261-38985045	chr15	+	38984307	38985084	True	NM_005739,NM_207444	chr15,chr15	-,+	RASGRP1,C15orf53	-127300,3714
chr15:74496590-74497130	chr15	+	74496657	74496921	True	NM_001199042,NM_001199040,NM_022369,NM_001142619,NM_001142618,NM_001142617,NM_001142620,NM_201526,NM_001199041	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,-,-,-,-,-,+,-	STRA6,STRA6,STRA6,STRA6,STRA6,STRA6,STRA6,ISLR,STRA6	-1437,5175,-1437,4500,-1101,4500,4500,-29803,3524
chr6:56715576-56716299	chr6	+	56715616	56716301	True	NM_152731,NM_001723	chr6,chr6	+,-	BEND6,DST	103471,-207922
chr1:205901500-205902894	chr1	+	205901506	205902908	True	NM_052934,NM_001123168,NM_134325	chr1,chr1,chr1	-,+,-	SLC26A9,FAM72A,SLC26A9	9732,236002,9732
chrX:44600336-44600567	chrX	+	44600371	44600535	True	NM_022076,NM_173794	chrX,chrX	+,-	DUSP21,FUNDC1	102713,-198150
chr8:80946740-80947438	chr8	+	80946811	80947335	True	NM_007029,NM_014018	chr8,chr8	+,-	STMN2,MRPS28	-423826,-4305
chr3:62303100-62303495	chr3	+	62303104	62303526	True	NM_020685,NM_018008	chr3,chr3	+,-	C3orf14,FEZF2	1869,55714
chr16:2879092-2879520	chr16	+	2879200	2879438	True	NR_026864,NM_145252	chr16,chr16	-,+	PRSS30P,ZG16B	13364,734
chr8:17103208-17104422	chr8	+	17103320	17104205	True	NM_152415,NM_001145152,NM_054026,NM_013354	chr8,chr8,chr8,chr8	+,+,-,-	VPS37A,VPS37A,CNOT7,CNOT7	195,195,232,232
chr22:43487538-43488196	chr22	+	43487755	43488221	True	NM_001197,NR_027779,NM_012263	chr22,chr22,chr22	+,-,-	BIK,TTLL1,TTLL1	18535,-2321,-2321
chr19:54876501-54877855	chr19	+	54876616	54877864	True	NM_002287,NM_021706,NM_001005367	chr19,chr19,chr19	-,-,+	LAIR1,LAIR1,TTYH1	5,5,48740
chr2:170562078-170563258	chr2	+	170562561	170563047	True	NM_001085447,NM_001199290	chr2,chr2	-,+	C2orf77,PHOSPHO2-KLHL23	-11630,-11656
chr1:182574336-182574876	chr1	+	182574435	182574913	True	NR_036490,NM_002928	chr1,chr1	+,-	LOC284648,RGS16	9361,-887
chr11:67171189-67171474	chr11	+	67171197	67171514	True	NM_198517,NM_002708,NM_001008709,NM_206873	chr11,chr11,chr11,chr11	+,-,-,-	TBC1D10C,PPP1CA,PPP1CA,PPP1CA	-29,-1821,-1821,-1821
chrX:100351766-100352609	chrX	+	100351890	100352649	True	NM_006733,NM_024917	chrX,chrX	+,-	CENPI,TRMT2B	2148,-44785
chr9:137965385-137965893	chr9	+	137965580	137965808	True	NM_014279,NM_006334,NM_002003	chr9,chr9,chr9	+,+,-	OLFM1,OLFM1,FCN1	1280,1294,-155774
chr14:50473471-50474010	chr14	+	50473613	50474044	True	NM_001012706,NM_001663	chr14,chr14	-,+	C14orf182,ARF6	244,-113936
chr19:13857270-13857575	chr19	+	13857271	13857449	True	NR_036515,NM_030818	chr19,chr19	-,+	LOC284454,CCDC130	89704,1303
chr15:32761498-32761910	chr15	+	32761668	32761956	True	NR_027470,NM_199357	chr15,chr15	-,+	FAM7A2,ARHGAP11A	-34418,145734
chr15:32761498-32761910	chr15	-	32871518	32871806	False	NM_199357,NR_036650	chr15,chr15	+,-	ARHGAP11A,LOC100288615	35884,-45576
chr15:32761498-32761910	chr15	+	28972715	28972772	False	NR_033351,NR_026589	chr15,chr15	-,+	GOLGA8F,WHAMML2	-194572,9956
chr15:32761498-32761910	chr15	-	30830076	30830364	False	NM_148911,NR_026858	chr15,chr15	-,+	CHRFAM7A,FAM7A1	-144212,34393
chr15:32761498-32761910	chr15	+	30720278	30720566	False	NM_148911,NR_026858	chr15,chr15	-,+	CHRFAM7A,FAM7A1	-34414,144191
chr10:99534310-99534903	chr10	+	99534475	99534807	True	NM_003015,NM_001002261	chr10,chr10	-,+	SFRP5,ZFYVE27	-2719,-36292
chr9:91943436-91944118	chr9	+	91943435	91944003	True	NM_016848,NM_024077	chr9,chr9	-,+	SHC3,SECISBP2	-149753,-10080
chr3:155366298-155366670	chr3	+	155366298	155366714	True	NM_001130960,NM_003875	chr3,chr3	-,+	PLCH1,GMPS	27441,221610
chr3:38691472-38692774	chr3	+	38691521	38692531	True	NM_001160161,NM_001160160,NM_000335,NM_001099405,NM_001099404,NM_005107,NM_198056	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,-,+,-	SCN5A,SCN5A,SCN5A,SCN5A,SCN5A,EXOG,SCN5A	-357,-357,-358,-358,-358,-153809,-358
chrX:67716157-67717249	chrX	+	67716157	67717131	True	NM_173834,NM_002547,NM_001195214	chrX,chrX,chrX	+,-,+	YIPF6,OPHN1,YIPF6	1492,-62858,1492
chr17:27572581-27574526	chr17	+	27572600	27574568	True	NM_005208,NM_020772	chr17,chr17	+,-	CRYBA1,NUFIP2	-248,46655
chr2:210881320-210881726	chr2	+	210881323	210881775	True	NM_152519,NM_199229	chr2,chr2	-,+	C2orf67,RPE	154326,-13999
chr1:171751018-171751296	chr1	+	171751076	171751306	True	NM_001007239,NM_014955,NM_015935,NR_033704	chr1,chr1,chr1,chr1	+,+,+,-	METTL13,METTL13,METTL13,VAMP4	-366,-366,-366,-39697
chr17:7522946-7523725	chr17	+	7523042	7523204	True	NM_133491,NR_027463,NM_004860,NR_027462	chr17,chr17,chr17,chr17	-,+,-,+	SAT2,SHBG,FXR2,SHBG	8048,-5712,-4827,8082
chr1:248124284-248124855	chr1	+	248124463	248124885	True	NM_001004491,NM_001001959	chr1,chr1	+,-	OR2AK2,OR11L1	3748,-119265
chr7:142982506-142982716	chr7	+	142982695	142982763	True	NM_032983,NM_032982,NM_153345,NM_014690	chr7,chr7,chr7,chr7	+,+,+,-	CASP2,CASP2,TMEM139,FAM131B	2544,2544,-683,76460
chr20:49348589-49349815	chr20	+	49348617	49349521	True	NM_032521,NM_080829	chr20,chr20	+,-	PARD6B,FAM65C	-587,-95191
chr19:57834718-57835573	chr19	+	57834854	57835234	True	NM_020633,NM_213598	chr19,chr19	-,+	VN1R1,ZNF543	132923,-3040
chr1:145729812-145730525	chr1	+	145729985	145730545	True	NM_002614,NM_001201326,NM_001201325,NM_007053	chr1,chr1,chr1,chr1	+,+,+,-	PDZK1,PDZK1,PDZK1,CD160	-2370,-2370,-2370,-14420
chr11:66621440-66622733	chr11	+	66621463	66622697	True	NM_024036,NM_022172	chr11,chr11	+,-	LRFN4,PC	2178,52693
chr4:8201719-8201933	chr4	+	8201804	8201878	True	NM_001130088,NM_018986	chr4,chr4	-,+	ABLIM2,SH3TC1	-41245,-795
chrX:9978926-9979455	chrX	+	9978943	9979489	True	NM_015691,NM_000273	chrX,chrX	+,-	WWC3,GPR143	4305,-244938
chr16:67518891-67519348	chr16	+	67519023	67519277	True	NM_004691,NM_001138,NM_024519	chr16,chr16,chr16	-,-,+	ATP6V0D1,AGRP,FAM65A	-3934,-1307,43439
chr5:32312818-32313086	chr5	+	32312937	32313113	True	NM_001040446,NM_006713	chr5,chr5	-,+	MTMR12,SUB1	51,272491
chrX:103031891-103033808	chrX	+	103032059	103033763	True	NM_000533,NM_001172285,NM_199478,NM_001128834	chrX,chrX,chrX,chrX	+,-,+,+	PLP1,GLRA4,PLP1,PLP1	-365,-48507,-365,-680
chr1:6295103-6295428	chr1	+	6295108	6295424	True	NM_012405,NM_001024598	chr1,chr1	-,+	ICMT,HES3	670,8827
chr11:64824941-64825219	chr11	+	64825126	64825252	True	NM_005468,NM_013299	chr11,chr11	-,+	NAALADL1,SAC3D1	807,-16801
chr17:39890042-39890387	chr17	+	39890042	39890202	True	NM_000805,NM_177977,NM_001079870,NM_001079871	chr17,chr17,chr17,chr17	+,-,-,-	GAST,HAP1,HAP1,HAP1	-21480,746,746,746
chr1:160037759-160039317	chr1	+	160037783	160039161	True	NM_002241,NM_004983	chr1,chr1	-,+	KCNJ10,KCNJ9	940,12198
chr12:123595487-123595739	chr12	+	123595561	123595779	True	NM_020845,NM_152269	chr12,chr12	-,+	PITPNM2,C12orf65	-586,122064
chr1:40562981-40563880	chr1	+	40562980	40563771	True	NM_001142604,NM_006367,NM_000310	chr1,chr1,chr1	-,+,-	PPT1,CAP1,PPT1	-14,-56776,-14
chr2:33957453-33958375	chr2	+	33957489	33958251	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-218602,-4205
chr5:1884321-1884624	chr5	+	1884337	1884647	True	NM_016358,NM_004553	chr5,chr5	-,+	IRX4,NDUFS6	-1457,-82892
chr1:15254799-15255357	chr1	+	15255069	15255335	True	NM_001018000,NM_001018001,NR_027136	chr1,chr1,chr1	+,+,-	KAZN,KAZN,C1orf126	-4495,960,223675
chr3:49133646-49134155	chr3	+	49133667	49133786	True	NM_005051,NM_199070,NM_017730,NM_198880	chr3,chr3,chr3,chr3	-,+,-,-	QARS,NDUFAF3,QRICH1,QRICH1	8436,-74644,-2163,-2163
chr11:75918948-75919634	chr11	+	75919226	75919572	True	NM_004626,NM_020193	chr11,chr11	-,+	WNT11,C11orf30	-1652,236496
chr9:39795386-39796178	chr9	+	39795584	39796179	True	NR_003528,NM_001085452	chr9,chr9	-,+	LOC653501,FAM75A1	-331058,88795
chr9:39795386-39796178	chr9	-	43709732	43709783	False	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	-79002,-24899
chr9:39795386-39796178	chr9	+	40610015	40610066	False	NM_001083124,NM_033160	chr9,chr9	+,-	FAM75A3,ZNF658	90224,182097
chr9:39795386-39796178	chr9	+	39266325	39266920	False	NM_033655,NM_001085452	chr9,chr9	-,+	CNTNAP3,FAM75A1	21431,88778
chr5:140240840-140242240	chr5	+	140240870	140242198	True	NM_031861,NM_031860,NM_002109,NM_031859,NM_018902,NM_018901	chr5,chr5,chr5,chr5,chr5,chr5	+,+,-,+,+,+	PCDHA11,PCDHA10,HARS,PCDHA10,PCDHA11,PCDHA10	5632,-5287,-169899,-5287,5632,-5287
chr10:112403753-112403953	chr10	+	112403785	112403855	True	NR_026932,NM_001134363	chr10,chr10	-,+	LOC282997,RBM20	226857,299
chr1:242012725-242013303	chr1	+	242012773	242013259	True	NM_006027,NM_001004343,NM_130398,NM_003686	chr1,chr1,chr1,chr1	+,-,+,+	EXO1,MAP1LC3C,EXO1,EXO1	-791,149183,-1331,-791
chr2:159664531-159665792	chr2	+	159664570	159665420	True	NM_001171637,NM_001017920	chr2,chr2	-,+	CCDC148,DAPL1	-351305,-12792
chr16:46724929-46726501	chr16	+	46725026	46726441	True	NM_014321,NR_037620,NM_018206	chr16,chr16,chr16	+,+,-	ORC6,ORC6,VPS35	-1519,-1519,-1882
chr19:39576302-39577096	chr19	+	39576310	39576671	True	NM_178820,NM_001004318	chr19,chr19	-,+	FBXO27,PAPL	-53112,-1416
chr21:10995028-10996771	chr21	+	10995032	10996815	True	NM_199260,NM_199261,NM_199259,NR_037458	chr21,chr21,chr21,chr21	-,-,-,+	TPTE,TPTE,TPTE,MIR3687	-4112,-4112,-4112,-1168880
chr13:77460734-77460940	chr13	+	77460789	77460941	True	NR_026983,NM_138444	chr13,chr13	+,-	BTF3P11,KCTD12	41643,-249
chr15:83951661-83952066	chr15	+	83951843	83952079	True	NM_003027,NM_001717	chr15,chr15	+,-	SH3GL3,BNC1	164011,1439
chr1:155290757-155290959	chr1	+	155290780	155290938	True	NM_001105205,NM_001105204,NM_014328,NM_001039517,NM_001105203	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	RUSC1,RUSC1,RUSC1,C1orf104,RUSC1	2789,-191,3279,3050,-191
chr11:117187058-117187773	chr11	+	117187235	117187759	True	NM_014956,NM_138973,NM_012104,NM_138971,NM_138972	chr11,chr11,chr11,chr11,chr11	+,-,-,-,-	CEP164,BACE1,BACE1,BACE1,BACE1	10811,-263,-263,-263,-263
chr19:33199461-33199780	chr19	+	33199467	33199764	True	NM_001110822,NM_032139	chr19,chr19	+,-	TDRD12,ANKRD27	10914,-33365
chr5:25263494-25263709	chr5	+	25263494	25263735	True	NR_037896,NM_020227	chr5,chr5	-,+	LOC340107,PRDM9	-422802,-1755821
chr1:100732239-100732457	chr1	+	100732365	100732505	True	NM_001918,NM_003729,NM_001130841	chr1,chr1,chr1	-,+,+	DBT,RTCD1,RTCD1	-16956,-709,-709
chr12:106696762-106697091	chr12	+	106696971	106697053	True	NM_006825,NM_152772	chr12,chr12	-,+	CKAP4,TCP11L2	-55258,-441
chrX:77367343-77367623	chrX	+	77367392	77367622	True	NM_000291,NM_015975	chrX,chrX	+,-	PGK1,TAF9B	-7783,27607
chr13:96295463-96296294	chr13	+	96295679	96296048	True	NM_006260,NM_198968,NM_014934	chr13,chr13,chr13	+,-,-	DNAJC3,DZIP1,DZIP1	33344,960,960
chr12:2112254-2113134	chr12	+	2112253	2113155	True	NM_000719,NM_152640	chr12,chr12	+,-	CACNA1C,DCP1B	49260,572
chr16:67532122-67533800	chr16	+	67532943	67533565	True	NM_001138,NM_024519	chr16,chr16	-,+	AGRP,FAM65A	-15227,29151
chr5:79784363-79785463	chr5	+	79784443	79785389	True	NM_205548,NM_001004441	chr5,chr5	+,-	FAM151B,ANKRD34B	-694,80977
chr2:219645290-219645550	chr2	+	219645341	219645428	True	NM_000784,NM_017431	chr2,chr2	+,-	CYP27A1,PRKAG3	1043,51135
chr8:110344094-110344566	chr8	+	110344158	110344602	True	NM_001193557,NR_036472,NM_020189,NR_036471,NM_001128211,NM_032869	chr8,chr8,chr8,chr8,chr8,chr8	+,+,+,+,-,-	ENY2,ENY2,ENY2,ENY2,NUDCD1,NUDCD1	1949,1949,1949,1949,-1996,1798
chr3:75484304-75484742	chr3	+	75484512	75484636	True	NR_031714,NR_024241	chr3,chr3	+,-	MIR1324,FAM86DP	195277,-246
chr12:57913509-57913997	chr12	+	57913509	57913967	True	NM_001195055,NM_052897,NM_001195053,NM_004083,NM_001195054,NM_001195057,NM_001195056	chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,+,-,-,-,-,-	DDIT3,MBD6,DDIT3,DDIT3,DDIT3,DDIT3,DDIT3	383,2691,383,383,383,383,383
chr6:26240112-26240973	chr6	+	26240274	26240896	True	NM_003547,NM_021018,NM_005320,NM_003540	chr6,chr6,chr6,chr6	-,-,-,+	HIST1H4G,HIST1H3F,HIST1H1D,HIST1H4F	6359,9989,-5058,-34
chr20:48099756-48100129	chr20	+	48099837	48100149	True	NM_004975,NR_003030	chr20,chr20	-,+	KCNB1,SNORD12	-656,-202668
chr3:128900415-128901884	chr3	+	128900787	128901739	True	NM_001127195,NM_001127194,NM_001127196,NM_001127193,NM_001127192,NM_016128,NM_003418	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,-,+,-	CNBP,CNBP,CNBP,CNBP,CNBP,COPG,CNBP	1127,1127,1127,1127,1127,66713,1127
chr14:91526232-91526461	chr14	+	91526306	91526430	True	NM_182398,NM_004755,NM_001102366	chr14,chr14,chr14	-,-,+	RPS6KA5,RPS6KA5,C14orf159	613,613,53926
chr12:8818730-8818945	chr12	+	8818747	8818823	True	NM_003480,NM_020734	chr12,chr12	-,+	MFAP5,RIMKLB	-3314,31694
chr14:20922276-20922835	chr14	+	20922539	20922825	True	NM_001641,NM_017807,NM_001100814,NM_080649,NM_080648,NM_144568	chr14,chr14,chr14,chr14,chr14,chr14	+,-,-,+,+,-	APEX1,OSGEP,TMEM55B,APEX1,APEX1,TMEM55B	464,492,6862,464,464,6862
chr11:64012690-64013062	chr11	+	64012839	64012899	True	NM_057092,NM_138689,NM_001184883,NM_004470,NM_000932,NM_001135208	chr11,chr11,chr11,chr11,chr11,chr11	+,-,+,+,+,+	FKBP2,PPP1R14B,PLCB3,FKBP2,PLCB3,FKBP2	-3302,1564,6095,-4477,6095,-4286
chr10:51485991-51486341	chr10	+	51486288	51486352	True	NM_001077685,NM_002443	chr10,chr10	-,+	AGAP7,MSMB	25,63200
chr10:88855543-88855960	chr10	+	88855669	88855790	True	NM_019054,NM_005271	chr10,chr10	+,-	FAM35A,GLUD1	-772,-893
chr14:95785087-95785946	chr14	+	95785132	95785770	True	NR_015415,NM_024734	chr14,chr14	+,-	FLJ45244,CLMN	-161158,525
chr5:175814292-175814757	chr5	+	175814397	175814682	True	NM_016391,NM_138820	chr5,chr5	-,+	NOP16,HIGD2A	911,1101
chr4:177116180-177116462	chr4	+	177116180	177116434	True	NM_144644,NM_021928	chr4,chr4	-,+	SPATA4,SPCS3	438,124655
chr9:124921494-124921763	chr9	+	124921494	124921680	True	NM_198469,NM_014222	chr9,chr9	+,-	MORN5,NDUFA8	509,468
chr10:79687361-79688376	chr10	+	79687436	79688418	True	NR_024585,NM_004747	chr10,chr10	+,-	LOC100128292,DLG5	-917,-1088
chr2:56151046-56152872	chr2	+	56151163	56152689	True	NM_001080433,NM_001039348,NM_001039349	chr2,chr2,chr2	+,-,-	CCDC85A,EFEMP1,EFEMP1	258568,33,33
chr8:144976812-144977340	chr8	+	144976878	144977196	True	NM_000837,NM_031308	chr8,chr8	+,-	GRINA,EPPK1	87029,-29444
chr8:30667890-30669311	chr8	+	30668056	30669010	True	NM_001009552,NM_005671	chr8,chr8	-,+	PPP2CB,UBXN8	1392,-66430
chr9:79114202-79115874	chr9	+	79114334	79115901	True	NM_018339,NM_001097636	chr9,chr9	-,+	RFK,GCNT1	-104890,40
chr1:144993044-144993495	chr1	+	144993093	144993539	True	NM_014644,NM_001195260,NM_001195261,NM_004892,NM_001002812,NM_001002810,NM_001198834	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,-,-	PDE4DIP,PDE4DIP,PDE4DIP,SEC22B,PDE4DIP,PDE4DIP,PDE4DIP	1533,3622,1593,102867,1533,1544,1544
chr11:22647607-22648632	chr11	+	22647623	22648452	True	NM_001143830,NM_022725	chr11,chr11	+,-	GAS2,FANCF	39707,-236
chr22:35857572-35858085	chr22	+	35857711	35857782	True	NM_005368,NM_006739	chr22,chr22	-,+	MB,MCM5	155653,-61646
chr1:46661507-46661716	chr1	+	46661514	46661654	True	NM_001013615,NM_017739	chr1,chr1	+,-	C1orf190,POMGNT1	7351,2517
chr1:169080505-169081661	chr1	+	169080653	169081690	True	NM_001677,NM_013330	chr1,chr1	+,-	ATP1B1,NME7	-4758,255546
chr1:153409546-153411015	chr1	+	153409550	153410784	True	NM_001045479,NM_176823	chr1,chr1	-,+	S100A7L2,S100A7A	1769,-20601
chr11:2292394-2292656	chr11	+	2292401	2292661	True	NM_139022,NM_005170	chr11,chr11	+,-	TSPAN32,ASCL2	30581,-219
chr9:34620388-34620594	chr9	+	34620430	34620636	True	NM_000155,NM_001017363,NM_024348,NM_007234,NM_148178,NM_148179	chr9,chr9,chr9,chr9,chr9,chr9	+,-,-,-,-,-	GALT,ARID3C,DCTN3,DCTN3,C9orf23,C9orf23	25998,7425,-20,-20,-8329,-8329
chr15:25299466-25299772	chr15	+	25299493	25299695	True	NR_003317,NR_003316,NR_003320,NR_003324,NR_003322,NR_003319,NR_003318,NM_130838	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,-	SNORD116-2,SNORD116-1,SNORD116-5,SNORD116-9,SNORD116-7,SNORD116-4,SNORD116-3,UBE3A	-188,-2921,7783,2310,7783,4988,2310,351008
chr19:19775808-19776345	chr19	+	19775996	19776092	True	NM_020410,NM_033204	chr19,chr19	-,+	ATP13A1,ZNF101	-1493,3570
chr2:191746420-191746706	chr2	+	191746561	191746743	True	NM_014905,NM_007315	chr2,chr2	+,-	GLS,STAT1	-1065,132283
chr2:27800237-27802040	chr2	+	27800489	27801868	True	NM_032266,NM_001142683,NM_032434	chr2,chr2,chr2	+,-,+	C2orf16,CCDC121,ZNF512	-1151,49930,4024
chr8:28348942-28349256	chr8	+	28349142	28349247	True	NM_017412,NM_172366,NM_145866	chr8,chr8,chr8	+,-,+	FZD3,FBXO16,FZD3	2474,-1358,2474
chr1:205891355-205892413	chr1	+	205891625	205892389	True	NM_052934,NM_001123168	chr1,chr1	-,+	SLC26A9,FAM72A	20249,246521
chr6:41888367-41888589	chr6	+	41888532	41888632	True	NM_004275,NM_004053	chr6,chr6	-,+	MED20,BYSL	295,332
chr1:145506924-145507354	chr1	+	145507091	145507373	True	NR_002328,NM_005105,NM_003846,NM_001184795	chr1,chr1,chr1,chr1	-,+,+,+	GNRHR2,RBM8A,PEX11B,PEX11B	8753,183,8791,9186
chr9:132515499-132516451	chr9	+	132515519	132516367	True	NM_014506,NM_004878	chr9,chr9	+,-	TOR1B,PTGES	49064,-175
chr8:67404669-67406387	chr8	+	67405239	67406393	True	NM_001080416,NM_152765	chr8,chr8	-,+	MYBL1,C8orf46	119137,-73
chr11:43964622-43964872	chr11	+	43964684	43964824	True	NM_021926,NM_001145033	chr11,chr11	-,+	ALX4,C11orf96	366942,-629
chr8:11841996-11843834	chr8	+	11842147	11843713	True	NM_001033017,NM_001033018,NM_001033019	chr8,chr8,chr8	+,-,-	DEFB135,DEFB136,DEFB134	-2370,-10039,10097
chr14:105532250-105532543	chr14	+	105532255	105532591	True	NM_174891,NM_013345	chr14,chr14	+,-	C14orf79,GPR132	-79690,-501
chr17:47840399-47841031	chr17	+	47840526	47840690	True	NM_030802,NM_001199155	chr17,chr17	-,+	FAM117A,MYST2	878,25290
chr1:193029897-193030834	chr1	+	193029906	193030842	True	NM_001173525,NM_001173524,NM_001199262,NM_001199263,NM_001199261,NM_015984,NR_033393,NM_004600,NM_001042369,NM_001042370	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,-,-,-,+,+,+,+	TROVE2,TROVE2,UCHL5,UCHL5,UCHL5,UCHL5,TROVE2,TROVE2,TROVE2,TROVE2	-953,-1405,-1383,-1383,-1383,-1383,-1405,-953,-953,-953
chr8:20036705-20036919	chr8	+	20036717	20036867	True	NM_003053,NM_001135691,NM_001693,NM_001142325,NM_001142324	chr8,chr8,chr8,chr8,chr8	-,-,+,-,-	SLC18A1,SLC18A1,ATP6V1B2,SLC18A1,SLC18A1	3900,3900,17836,3900,3900
chr15:75250264-75250538	chr15	+	75250513	75250575	True	NM_017793,NM_001178111	chr15,chr15	-,+	RPP25,SCAMP5	-738,37300
chr18:48093222-48094282	chr18	+	48093221	48094291	True	NM_002747,NM_001127175	chr18,chr18	+,-	MAPK4,MRO	-6794,252193
chr12:122516951-122517200	chr12	+	122517021	122517163	True	NM_014938,NM_001014336	chr12,chr12	+,-	MLXIP,IL31	-312,141633
chr3:66551681-66552408	chr3	+	66551766	66552197	True	NR_028475,NM_015541	chr3,chr3	+,-	SLC25A26,LRIG1	-280649,-921
chr16:732542-732768	chr16	+	732694	732776	True	NM_032259,NM_005861,NM_003961,NM_001005920	chr16,chr16,chr16,chr16	-,+,+,-	WDR24,STUB1,RHBDL1,JMJD8	7674,-2630,-6670,1713
chr17:15159304-15160688	chr17	+	15159515	15160717	True	NM_000304,NR_033371,NM_153321,NM_153322	chr17,chr17,chr17,chr17	-,+,-,-	PMP22,CDRT7,PMP22,PMP22	7977,-225274,5222,3426
chr1:12288125-12288940	chr1	+	12288299	12288854	True	NM_138346,NM_018156,NM_015378	chr1,chr1,chr1	-,+,+	KIAA2013,VPS13D,VPS13D	-301814,1258,1258
chr1:20517488-20517698	chr1	+	20517494	20517734	True	NM_001105572,NM_152376	chr1,chr1	-,+	PLA2G2C,UBXN10	-15807,-4967
chr16:57674889-57675568	chr16	+	57674948	57675468	True	NM_001145774,NM_033212	chr16,chr16	+,-	GPR56,CCDC102A	-1792,-104471
chr12:50297985-50299119	chr12	+	50298222	50298906	True	NM_000486,NM_012306,NR_026948	chr12,chr12,chr12	+,-,-	AQP2,FAIM2,LOC283332	45617,-462,6790
chr7:54271514-54272479	chr7	+	54271515	54272484	True	NM_182546,NR_004422	chr7,chr7	+,-	VSTM2A,HPVC1	337534,-1401
chr20:29996307-29997466	chr20	+	29996322	29997267	True	NM_001011878,NR_002577,NM_001171832	chr20,chr20,chr20	-,+,-	DEFB121,DEFB122,DEFB121	-2253,11974,3424
chr19:42134126-42135167	chr19	+	42134130	42135187	True	NM_033543,NM_001817	chr19,chr19	+,-	CEACAM21,CEACAM4	-51650,-688
chr11:9115201-9115519	chr11	+	9115231	9115493	True	NM_020974,NM_001170690,NR_027713	chr11,chr11,chr11	-,-,+	SCUBE2,SCUBE2,KRT8P41	-2081,-2081,416
chr13:44145680-44146110	chr13	+	44145938	44146094	True	NM_001128303,NM_001127615	chr13,chr13	+,-	C13orf31,ENOX1	307325,57569
chr11:36595330-36595792	chr11	+	36595372	36595822	True	NM_000448,NM_000536	chr11,chr11	+,-	RAG1,RAG2	-5860,24057
chr19:29416681-29417539	chr19	+	29416872	29417555	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	38482,286636
chr6:107781504-107782129	chr6	+	107781606	107781870	True	NM_018013,NM_020381	chr6,chr6	+,-	SOBP,PDSS2	29446,-827
chr17:7761637-7761948	chr17	+	7761732	7761966	True	NM_032356,NM_144607,NM_203411	chr17,chr17,chr17	-,+,+	LSMD1,CYB5D1,TMEM88	-560,-719,-3399
chr10:102046552-102048135	chr10	+	102046663	102048161	True	NM_005063,NM_001001342,NM_173809	chr10,chr10,chr10	+,-,-	SCD,BLOC1S2,BLOC1S2	58610,-549,-224
chr16:30771554-30772078	chr16	+	30771680	30772074	True	NM_001195620,NM_014771,NM_001014979	chr16,chr16,chr16	-,+,-	C16orf93,RNF40,C16orf93	1541,1555,1541
chr7:54486581-54487069	chr7	+	54486582	54486990	True	NM_182546,NR_004422	chr7,chr7	+,-	VSTM2A,HPVC1	123028,-216468
chr1:84642584-84643143	chr1	+	84642632	84643124	True	NM_182948,NM_024686	chr1,chr1	+,-	PRKACB,TTLL7	-32737,-177799
chr13:43597747-43598339	chr13	+	43597773	43598347	True	NM_013238,NM_033255	chr13,chr13	+,-	DNAJC15,EPSTI1	-462,-31396
chr12:12233408-12235305	chr12	+	12233688	12235047	True	NM_138722,NM_138723,NM_030766,NM_002336	chr12,chr12,chr12,chr12	+,+,+,-	BCL2L14,BCL2L14,BCL2L14,LRP6	-9337,-9861,-9337,184814
chr12:122747630-122748197	chr12	+	122748001	122748159	True	NM_030765,NM_022916	chr12,chr12	+,-	B3GNT4,VPS33A	-59824,2959
chr11:60176779-60178409	chr11	+	60177132	60178149	True	NM_022349,NM_032597	chr11,chr11	-,+	MS4A6A,MS4A14	-226458,-13708
chr7:143058386-143058591	chr7	+	143058574	143058641	True	NM_001010972,NM_001031690,NM_014690	chr7,chr7,chr7	+,-,-	ZYX,FAM131B,FAM131B	19718,1250,583
chr10:79492167-79493847	chr10	+	79492173	79493835	True	NR_024585,NM_002247	chr10,chr10	+,-	LOC100128292,KCNMA1	192734,-94596
chr19:37407362-37408385	chr19	+	37407471	37408402	True	NM_001037232,NM_001171979,NM_001204838,NM_001204839,NM_198539,NM_001204835,NM_001204836,NM_001204837	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,+,+,+,+,+,+	ZNF829,ZNF829,ZNF568,ZNF568,ZNF568,ZNF568,ZNF568,ZNF568	-278,-548,-291,-291,-291,-291,-291,-291
chr2:29034131-29034542	chr2	+	29034247	29034473	True	NM_182756,NM_001142634,NM_001008779,NM_017910	chr2,chr2,chr2,chr2	+,+,+,-	SPDYA,SPDYA,SPDYA,TRMT61B	-600,-600,4389,58752
chr12:22698959-22699651	chr12	+	22698959	22699357	True	NM_014802,NM_001039481	chr12,chr12	-,+	KIAA0528,ETNK1	-1507,78718
chr5:1225616-1226003	chr5	+	1225649	1226045	True	NM_182632,NM_001193376	chr5,chr5	+,-	SLC6A18,TERT	-230,69167
chr8:67782981-67783211	chr8	+	67783003	67783193	True	NR_002598,NM_173518,NM_001136160,NM_001136161	chr8,chr8,chr8,chr8	-,+,+,+	SNORD87,C8orf45,C8orf45,C8orf45	51641,-70,543,-70
chr9:131548177-131548526	chr9	+	131548348	131548411	True	NM_018201,NM_006336	chr9,chr9	+,-	TBC1D13,ZER1	1098,-14150
chrX:48694034-48694360	chrX	+	48694197	48694364	True	NM_013271,NM_181532	chrX,chrX	-,+	PCSK1N,ERAS	-237,-6966
chr16:56685932-56686174	chr16	+	56685937	56686029	True	NM_005947,NM_005949,NR_003658,NM_005950,NR_027781	chr16,chr16,chr16,chr16,chr16	+,+,+,-,+	MT1B,MT1F,MT1DP,MT1G,MT1DP	-177,5825,-8272,15998,-8389
chr16:2522999-2523812	chr16	+	2523017	2523847	True	NM_001199107,NM_006181,NM_020705,NM_001048212	chr16,chr16,chr16,chr16	+,+,+,-	TBC1D24,NTN3,TBC1D24,CEMP1	1299,-1568,1299,57612
chr16:52562792-52564357	chr16	+	52562858	52564220	True	NM_001080430,NM_025134	chr16,chr16	-,+	TOX3,CHD9	16637,524724
chr5:81596920-81598876	chr5	+	81597151	81598564	True	NM_001017971,NM_001025	chr5,chr5	+,-	ATP6AP1L,RPS23	2601,-22916
chr17:46506734-46507189	chr17	+	46506738	46507138	True	NM_001075099,NR_033201,NM_003726	chr17,chr17,chr17	-,+,-	SKAP1,LOC404266,SKAP1	506,160684,506
chr11:36594952-36595307	chr11	+	36595070	36595290	True	NM_000448,NM_000536	chr11,chr11	+,-	RAG1,RAG2	-5561,24589
chr6:137815261-137816516	chr6	+	137815403	137816197	True	NM_006290,NM_175747	chr6,chr6	+,-	TNFAIP3,OLIG3	372383,30
chr17:58095136-58095673	chr17	+	58095235	58095477	True	NM_003161,NR_002924	chr17,chr17	+,-	RPS6KB1,DHX40P1	-124843,909
chr17:58095136-58095673	chr17	+	60351852	60351902	False	NR_027486,NM_001144933	chr17,chr17	-,+	TBC1D3P2,EFCAB3	1164,95676
chr7:99647578-99648099	chr7	+	99647683	99648056	True	NM_145914,NM_017715	chr7,chr7	+,-	ZSCAN21,ZNF3	-323,31368
chr17:6916682-6917141	chr17	+	6916697	6917059	True	NR_030178,NM_174893,NM_001004333,NM_001142798,NM_001142799,NR_037715,NR_037716,NR_037717,NR_029712,NM_181844	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,+,+,+,+,+,+,-,+	MIR497,C17orf49,RNASEK,C17orf49,C17orf49,RNASEK,RNASEK,RNASEK-C17ORF49,MIR195,BCL6B	4332,996,-1012,996,996,-1012,-1012,-1012,4011,9309
chr1:201121168-201123079	chr1	+	201121214	201122882	True	NM_001164586,NM_016456	chr1,chr1	+,-	IGFN1,TMEM9	37070,800
chr2:63560924-63561250	chr2	+	63561003	63561281	True	NR_036635,NM_005917	chr2,chr2	-,+	DBIL5P2,MDH1	-214326,254461
chr10:24534651-24535071	chr10	+	24534861	24535107	True	NM_020824,NR_023388	chr10,chr10	-,+	ARHGAP21,PRINS	477541,946
chr16:4815984-4816239	chr16	+	4815988	4816279	True	NM_021646,NR_029453	chr16,chr16	-,+	ZNF500,LOC440335	937,22118
chr3:48130471-48130706	chr3	+	48130625	48130697	True	NM_004345,NM_001134364,NM_002375,NM_030885	chr3,chr3,chr3,chr3	+,-,-,-	CAMP,MAP4,MAP4,MAP4	134164,122,122,122
chr6:3076730-3077009	chr6	+	3076951	3077011	True	NR_033884,NM_003804	chr6,chr6	-,+	LOC401233,RIPK1	-51946,46
chr17:4046742-4047166	chr17	+	4046838	4047196	True	NM_144611,NM_015113,NR_023346,NR_023347	chr17,chr17,chr17,chr17	+,-,+,+	CYB5D2,ZZEF1,CYB5D2,CYB5D2	-427,-585,-427,-427
chrX:122249121-122250116	chrX	+	122249139	122250126	True	NM_000828,NM_001081550	chrX,chrX	+,-	GRIA3,THOC2	67969,616829
chr15:40858827-40860287	chr15	+	40859139	40860289	True	NM_052849,NM_001080792,NM_001080791,NM_152260	chr15,chr15,chr15,chr15	-,-,-,+	C15orf57,C15orf57,C15orf57,RPUSD2	-1887,-1887,-1887,1247
chr15:23892846-23893127	chr15	+	23892846	23893048	True	NM_005664,NM_019066	chr15,chr15	+,-	MKRN3,MAGEL2	-82443,-5
chr19:47336549-47337182	chr19	+	47336774	47336846	True	NR_024258,NM_004491	chr19,chr19	-,+	SNAR-E,GRLF1	-2813,85086
chr20:45949439-45949972	chr20	+	45949514	45949996	True	NR_024594,NM_012408	chr20,chr20	+,-	LOC100131496,ZMYND8	-2319,35528
chr4:72968264-72969643	chr4	+	72968846	72969659	True	NM_053036,NM_001204306	chr4,chr4	+,-	NPFFR2,GC	-64062,-297609
chr1:155946171-155946649	chr1	+	155946317	155946576	True	NM_001162383,NM_004723,NM_181885,NM_001162384	chr1,chr1,chr1,chr1	-,-,+,-	ARHGEF2,ARHGEF2,RXFP4,ARHGEF2	1810,1440,-34888,1810
chr20:39318279-39318665	chr20	+	39318337	39318629	True	NM_003286,NM_005461	chr20,chr20	+,-	TOP1,MAFB	338832,-461
chr16:75657990-75658545	chr16	+	75658400	75658582	True	NR_036460,NM_012091,NM_018975	chr16,chr16,chr16	-,-,+	ADAT1,ADAT1,TERF2IP	-1179,-1179,23052
chr8:95556187-95556620	chr8	+	95556352	95556625	True	NM_183009,NM_015496,NM_001034915	chr8,chr8,chr8	-,-,+	KIAA1429,KIAA1429,ESRP1	9172,9172,96738
chr3:114010241-114010559	chr3	+	114010334	114010552	True	NR_030293,NM_173799	chr3,chr3	-,+	MIR568,TIGIT	24914,2280
chr6:26225570-26226314	chr6	+	26225706	26226358	True	NM_003518,NM_003532,NM_005320,NM_021052	chr6,chr6,chr6,chr6	-,+,-,+	HIST1H2BG,HIST1H3E,HIST1H1D,HIST1H2AE	-8834,-374,8908,-8609
chr10:94595965-94596221	chr10	+	94595968	94596195	True	NM_004969,NM_001013848	chr10,chr10	-,+	IDE,EXOC6	-262116,-1550
chr5:140753540-140754223	chr5	+	140753544	140754206	True	NM_018924,NM_032086,NM_018920,NM_032097,NM_032054,NM_018918,NM_018919,NM_005642,NM_032087	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,+,-,+	PCDHGB3,PCDHGA6,PCDHGA7,PCDHGB3,PCDHGA5,PCDHGA5,PCDHGA6,TAF7,PCDHGA7	-3633,56,8260,-3633,-9697,-9697,56,-53193,8260
chr2:242127946-242128162	chr2	+	242127995	242128173	True	NM_015148,NM_001001666,NM_001001891	chr2,chr2,chr2	-,+,+	PASK,ANO7,ANO7	-39117,-122,-122
chr11:2423547-2423984	chr11	+	2423554	2424004	True	NM_005706,NM_014555	chr11,chr11	+,-	TSSC4,TRPM5	-82,20321
chrY:14488317-14489437	chrY	+	14488786	14489441	True	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	284856,43998
chr20:55842399-55842806	chr20	+	55842398	55842844	True	NM_012444,NM_001719	chr20,chr20	+,-	SPO11,BMP7	61986,-691
chr3:169627160-169627665	chr3	+	169627242	169627460	True	NM_024727,NM_182610	chr3,chr3	-,+	LRRC31,SAMD7	-39582,2021
chrX:147581000-147581347	chrX	+	147581021	147581323	True	NM_002025,NR_024503,NM_001169124,NM_001169125,NM_001169122,NM_001169123	chrX,chrX,chrX,chrX,chrX,chrX	+,-,+,+,+,+	AFF2,FMR1-AS1,AFF2,AFF2,AFF2,AFF2	815,-577345,815,815,815,815
chr15:43801900-43802363	chr15	+	43801907	43802282	True	NM_002373,NM_005657	chr15,chr15	+,-	MAP1A,TP53BP1	7523,476
chr11:128709262-128709864	chr11	+	128709275	128709903	True	NM_000890,NM_000220	chr11,chr11	+,-	KCNJ5,KCNJ1	51409,2510
chr5:140167282-140167561	chr5	+	140167316	140167610	True	NM_031410,NM_031411,NM_002109,NM_031495,NM_018900,NM_018905	chr5,chr5,chr5,chr5,chr5,chr5	+,+,-,+,+,+	PCDHA1,PCDHA1,HARS,PCDHA2,PCDHA1,PCDHA2	-1491,-1491,-96345,6833,-1491,6833
chr5:137421398-137422065	chr5	+	137421633	137421893	True	NM_016603,NM_058244	chr5,chr5	-,+	FAM13B,WNT8A	-52831,-1920
chrX:47243136-47244076	chrX	+	47243239	47244119	True	NR_003710,NM_007130	chrX,chrX	+,-	SNORA11C,ZNF41	3929,98276
chr12:122691019-122691247	chr12	+	122691063	122691157	True	NM_030765,NM_019887	chr12,chr12	+,-	B3GNT4,DIABLO	-2886,20961
chrX:11783071-11783662	chrX	+	11783113	11783526	True	NM_078628,NM_006800,NM_001193270,NM_006125,NM_078629	chrX,chrX,chrX,chrX,chrX	+,+,+,-,+	MSL3,MSL3,MSL3,ARHGAP6,MSL3	-6886,-5429,-6455,-99292,-6886
chr19:58085314-58086384	chr19	+	58085434	58086312	True	NM_001010879,NM_017879	chr19,chr19	+,-	ZIK1,ZNF416	9315,3981
chr14:45362635-45363364	chr14	+	45362859	45363373	True	NM_017658,NM_001017923	chr14,chr14	-,+	KLHL28,C14orf28	67866,3133
chr19:52773394-52773828	chr19	+	52773401	52773725	True	NM_001010851,NM_001102657	chr19,chr19	+,-	ZNF766,ZNF836	-628,-98505
chr3:128207097-128207382	chr3	+	128207143	128207211	True	NM_001145662,NM_001145661,NR_026954,NM_032638	chr3,chr3,chr3,chr3	-,-,+,-	GATA2,GATA2,LOC90246,GATA2	-379,212,19466,4869
chr4:25562105-25562902	chr4	+	25562206	25562752	True	NM_015187,NM_001177998	chr4,chr4	-,+	SEL1L3,SLC34A2	301922,94682
chr19:51811250-51811753	chr19	+	51811315	51811808	True	NM_001163922,NM_001101372	chr19,chr19	-,+	VSIG10L,IGLON5	33627,3293
chr9:33081398-33082988	chr9	+	33081483	33082700	True	NM_001539,NM_018225	chr9,chr9	+,-	DNAJA1,SMU1	-56328,-4769
chr4:178701767-178702704	chr4	+	178701770	178702672	True	NR_033655,NR_028342	chr4,chr4	-,+	AGA,LOC285501	-338113,-51910
chr12:112123865-112124374	chr12	+	112123867	112124245	True	NM_006768,NM_001136538,NM_025247	chr12,chr12,chr12	-,+,+	BRAP,ACAD10,ACAD10	-77,-61,-61
chr5:31202167-31202461	chr5	+	31202167	31202470	True	NM_004932,NM_001100412	chr5,chr5	+,-	CDH6,DROSHA	-8425,329865
chr7:22395911-22396180	chr7	+	22395981	22396201	True	NM_012294,NM_000600	chr7,chr7	-,+	RAPGEF5,IL6	382,370564
chr10:69645058-69645992	chr10	+	69645141	69646039	True	NM_201262,NM_001142498,NM_012238	chr10,chr10,chr10	-,+,+	DNAJC12,SIRT1,SIRT1	-47204,-253,-765
chr8:37277146-37278991	chr8	+	37277389	37278887	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	274413,326727
chr3:42543486-42543886	chr3	+	42543582	42543884	True	NM_004624,NM_001201584	chr3,chr3	+,-	VIPR1,SEC22C	219,79686
chr3:125601732-125601939	chr3	+	125601780	125601960	True	NM_001015050,NR_024250	chr3,chr3	-,+	ALG1L,LOC100125556	53977,33483
chr1:13480136-13480657	chr1	+	13480312	13480574	True	NM_001045480,NM_001099790,NM_001099850	chr1,chr1,chr1	+,-,-	PRAMEF16,PRAMEF19,PRAMEF18	14679,-2743,-2743
chr1:13480136-13480657	chr1	+	13701148	13701410	False	NM_001099790,NM_001099850,NM_001099851	chr1,chr1,chr1	-,-,+	PRAMEF19,PRAMEF18,PRAMEF17	-2743,-2743,14677
chr14:101038658-101039446	chr14	+	101038853	101039483	True	NR_024096,NM_001159531,NM_020836	chr14,chr14,chr14	+,-,-	C14orf70,BEGAIN,BEGAIN	84121,-4446,-2722
chr2:132248327-132248536	chr2	+	132248339	132248531	True	NM_001085365,NR_026922	chr2,chr2	-,+	MZT2A,LOC150776	1583,1854
chr12:119418864-119419323	chr12	+	119419155	119419351	True	NR_024246,NM_194286	chr12,chr12	-,+	LOC144742,SRRM4	321884,-38
chr9:125697177-125697707	chr9	+	125697177	125697598	True	NM_012197,NM_020924	chr9,chr9	+,-	RABGAP1,ZBTB26	5689,-3398
chr11:66361752-66362882	chr11	+	66361844	66362929	True	NM_005125,NM_018219	chr11,chr11	+,-	CCS,CCDC87	-1205,-1290
chr17:71309666-71311331	chr17	+	71309767	71311366	True	NM_012121,NM_017941	chr17,chr17	-,+	CDC42EP4,C17orf80	-1624,-81042
chr4:42400143-42400479	chr4	+	42400147	42400451	True	NM_207406,NM_001080505	chr4,chr4	-,+	BEND4,SHISA3	-245252,-342
chr19:7581356-7582041	chr19	+	7581689	7582017	True	NM_018083,NM_080662,NM_020533	chr19,chr19,chr19	+,-,+	ZNF358,PEX11G,MCOLN1	-736,-27784,5478
chr6:52664691-52665838	chr6	+	52664695	52665575	True	NM_145740,NM_014051	chr6,chr6	-,+	GSTA1,TMEM14A	3139,-128862
chr19:41949116-41950473	chr19	+	41949352	41950465	True	NM_001167869,NM_001167868,NM_018035,NM_001167870,NM_001167871,NM_001167867,NM_001130514,NR_030765	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,+,-	ATP5SL,ATP5SL,ATP5SL,ATP5SL,ATP5SL,ATP5SL,C19orf69,ATP5SL	-3509,-3871,-3509,-3509,-3509,-3871,-340,-3509
chr2:133015193-133015520	chr2	+	133015208	133015492	True	NR_031608,NM_001508,NR_027020	chr2,chr2,chr2	-,+,-	MIR663B,GPR39,ANKRD30BL	-555,158654,100
chr7:66312642-66312958	chr7	+	66312676	66313000	True	NR_003934,NM_017994	chr7,chr7	-,+	LOC729156,C7orf42	-2863,73202
chr7:66312642-66312958	chr7	-	65955840	65955890	False	NM_001167961,NR_002933	chr7,chr7	+,-	KCTD7,LOC493754	137977,87658
chr18:47917889-47918562	chr18	+	47917917	47918546	True	NM_145060,NM_014593	chr18,chr18	+,-	SKA1,CXXC1	-16577,-103225
chr19:918675-918977	chr19	+	918736	918968	True	NM_138774,NM_005224,NM_032551	chr19,chr19,chr19	-,+,+	C19orf22,ARID3A,KISS1R	-5511,7068,-1445
chr5:169532282-169532664	chr5	+	169532287	169532666	True	NM_144769,NM_012188,NM_001129891	chr5,chr5,chr5	+,+,-	FOXI1,FOXI1,FAM196B	250,250,-124543
chr15:71043162-71044294	chr15	+	71043197	71044065	True	NM_018003,NM_001199017	chr15,chr15	-,+	UACA,LRRC49	11835,140862
chr3:53881743-53882651	chr3	+	53881967	53882677	True	NM_018397,NM_018725	chr3,chr3	-,+	CHDH,IL17RB	-1547,-1441
chr2:108536435-108537772	chr2	+	108536506	108537771	True	NR_024439,NM_021815	chr2,chr2	-,+	LOC729121,SLC5A7	-93923,65223
chr2:108536435-108537772	chr2	+	106868965	106870239	False	NR_003506,NM_025076	chr2,chr2	+,-	PLGLA,UXS1	132529,-58170
chr7:122487013-122487438	chr7	+	122487031	122487489	True	NM_001009571,NR_036484	chr7,chr7	-,+	CADPS2,LOC154860	39378,-543378
chr15:51633500-51634048	chr15	+	51633537	51634033	True	NM_000103,NM_181789,NM_031226	chr15,chr15,chr15	-,+,-	CYP19A1,GLDN,CYP19A1	-2742,57,-2742
chr5:102459906-102461404	chr5	+	102460168	102461284	True	NM_015216,NM_017676	chr5,chr5	+,-	PPIP5K2,GIN1	3972,-4326
chr12:122688652-122688867	chr12	+	122688665	122688731	True	NM_030765,NM_019887	chr12,chr12	+,-	B3GNT4,DIABLO	-488,23387
chr1:217263168-217263389	chr1	+	217263228	217263440	True	NM_138796,NM_206595,NM_206594	chr1,chr1,chr1	+,-,-	SPATA17,ESRRG,ESRRG	541254,-252,-252
chr6:155588267-155589789	chr6	+	155588423	155589731	True	NM_001001346,NM_016020	chr6,chr6	+,-	CLDN20,TFB1M	-3327,45936
chr14:56584609-56584883	chr14	+	56584612	56584686	True	NR_026797,NM_021255	chr14,chr14	-,+	C14orf34,PELI2	-321220,406
chr1:149861268-149862598	chr1	+	149861343	149862546	True	NM_175065,NM_003528,NM_003517,NM_016074	chr1,chr1,chr1,chr1	-,-,+,+	HIST2H2AB,HIST2H2BE,HIST2H2AC,BOLA1	-1877,-3111,-2881,8608
chr17:26881985-26882909	chr17	+	26882057	26882678	True	NM_054035,NM_005148,NM_003593	chr17,chr17,chr17	-,-,+	UNC119,UNC119,FOXN1	-2411,-2411,-31149
chr6:27356317-27356785	chr6	+	27356323	27356727	True	NM_001076781,NR_024553	chr6,chr6	+,-	ZNF391,ZNF204P	-12,-13170
chr5:177541450-177541686	chr5	+	177541488	177541730	True	NM_015111,NM_001034833	chr5,chr5	+,-	N4BP3,NHP2	-983,39281
chr17:42262362-42262936	chr17	+	42262616	42262749	True	NM_178542,NM_001076674,NM_024107,NM_177441	chr17,chr17,chr17,chr17	-,+,+,+	C17orf65,TMUB2,TMUB2,TMUB2	1390,1604,1604,1824
chr19:45033575-45033808	chr19	+	45033779	45033845	True	NM_001102598,NM_001102599,NM_001205280,NM_001102600,NM_001102597	chr19,chr19,chr19,chr19,chr19	-,-,+,-,-	CEACAM20,CEACAM20,LOC147710,CEACAM20,CEACAM20	-231,-231,83094,-231,-231
chr11:577803-578844	chr11	+	577814	578751	True	NR_029623,NM_020901,NR_026967	chr11,chr11,chr11	-,+,-	MIR210,PHRF1,LOC143666	-9616,-1382,-1929
chr4:16062095-16063605	chr4	+	16062303	16063433	True	NR_027696,NM_001145849	chr4,chr4	+,-	FLJ39653,PROM1	164852,14358
chr2:224703129-224703629	chr2	+	224703147	224703428	True	NM_022915,NM_001039569	chr2,chr2	+,-	MRPL44,AP1S3	118692,-828
chr1:12186354-12186837	chr1	+	12186411	12186875	True	NM_152942,NM_138346	chr1,chr1	+,-	TNFRSF8,KIAA2013	-504,-199926
chr6:64281835-64282150	chr6	+	64281895	64282113	True	NM_016571,NM_003463	chr6,chr6	-,+	LGSN,PTP4A1	-252013,-26
chr17:79314679-79314979	chr17	+	79314767	79314843	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	58696,-10293
chr7:134900230-134901694	chr7	+	134900317	134901141	True	NM_014149,NM_182489	chr7,chr7	-,+	WDR91,STRA8	-4001,15589
chr14:76126428-76127051	chr14	+	76126433	76127087	True	NM_015072,NM_007176	chr14,chr14	+,-	TTLL5,C14orf1	463,501
chr22:46664057-46664272	chr22	+	46664073	46664309	True	NM_006071,NM_017931	chr22,chr22	-,+	PKDREJ,TTC38	-4854,-263
chr10:101427850-101429597	chr10	+	101428069	101429436	True	NM_020354,NM_031212	chr10,chr10	+,-	ENTPD7,SLC25A28	-8863,-47848
chr7:130132820-130133531	chr7	+	130132847	130133314	True	NR_004382,NM_002402,NM_177525,NR_029899,NM_177524	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	MESTIT1,MEST,MEST,MIR335,MEST	-1834,-960,-1725,2637,-6852
chr3:50336057-50336330	chr3	+	50336149	50336305	True	NM_001200016,NM_001200029,NM_003549,NM_001200030,NM_001200031,NM_001200032,NM_012191,NM_001200018,NM_153285,NM_007312,NM_153282,NM_153215,NM_153283,NM_006764,NM_033159	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,-,-,-,-,-,-,-,+,-,-,-	NAT6,HYAL3,HYAL3,HYAL3,HYAL3,HYAL3,NAT6,NAT6,HYAL1,HYAL1,HYAL1,C3orf45,HYAL1,IFRD2,HYAL1	597,38,644,644,644,644,597,65,4749,4749,4749,-19682,4749,-6123,4749
chr4:101347492-101348928	chr4	+	101347607	101348946	True	NM_001159694,NR_002799	chr4,chr4	-,+	EMCN,LOC256880	90361,-476022
chr7:44928470-44929721	chr7	+	44928879	44929165	True	NM_033224,NM_021130	chr7,chr7	-,+	PURB,PPIA	-3919,-92689
chr9:127538917-127539268	chr9	+	127539012	127539130	True	NM_001489,NM_033334,NM_182487	chr9,chr9,chr9	-,-,+	NR6A1,NR6A1,OLFML2A	-5436,-5436,306
chr14:25076361-25076750	chr14	+	25076393	25076791	True	NM_033423,NM_015299	chr14,chr14	-,+	GZMH,KHNYN	2123,-177303
chr19:16128053-16128757	chr19	+	16128052	16128596	True	NR_026828,NM_021187	chr19,chr19	+,-	LOC126536,CYP4F11	-1659,-82376
chr16:18936656-18937032	chr16	+	18936662	18936932	True	NM_015092,NM_024847	chr16,chr16	-,+	SMG1,TMC7	844,58323
chr16:18936656-18937032	chr16	+	29605635	29605685	False	NR_002593,NM_001030288	chr16,chr16	-,+	SLC7A5P1,SPN	19403,68614
chr16:18936656-18937032	chr16	+	30345723	30345773	False	NR_002453,NM_013292	chr16,chr16	-,+	LOC595101,MYLPF	972,40349
chr19:19005333-19005633	chr19	+	19005337	19005637	True	NM_198207,NM_021267,NM_019070,NM_001492	chr19,chr19,chr19,chr19	-,-,+,-	LASS1,LASS1,DDX49,GDF1	1366,1366,24846,1366
chr3:187592340-187593176	chr3	+	187592596	187593081	True	NR_034062,NM_001706	chr3,chr3	+,-	LOC100131635,BCL6	-172493,-129083
chr7:72632885-72633495	chr7	+	72633162	72633536	True	NR_002164,NR_003186	chr7,chr7	-,+	GTF2IRD2P1,NCF1B	52172,1137
chr7:72632885-72633495	chr7	+	74186863	74187237	False	NM_173537,NM_000265	chr7,chr7	-,+	GTF2IRD2,NCF1	80654,1071
chr7:72632885-72633495	chr7	-	74588893	74589267	False	NM_001003795,NR_003187	chr7,chr7	+,-	GTF2IRD2B,NCF1C	-80597,-1077
chr12:117355719-117356720	chr12	+	117355885	117356680	True	NM_012174,NM_003806,NM_153348	chr12,chr12,chr12	+,-,+	FBXW8,HRK,FBXW8	-7176,-36653,-7176
chr5:131346453-131346746	chr5	+	131346467	131346791	True	NM_001205247,NM_001205251,NM_001205250,NM_001205248,NM_000588,NM_015256,NM_001009185	chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,+,-,-	ACSL6,ACSL6,ACSL6,ACSL6,IL3,ACSL6,ACSL6	614,866,1020,866,49555,614,614
chr17:72858030-72858373	chr17	+	72858094	72858252	True	NM_000835,NM_178160	chr17,chr17	-,+	GRIN2C,OTOP2	-2087,62117
chrX:8700768-8702474	chrX	+	8700863	8702146	True	NM_001001888,NM_000216	chrX,chrX	+,-	VCX3B,KAL1	-268043,-636
chr20:47897998-47898901	chr20	+	47898005	47898623	True	NR_003605,NR_003604,NR_002433,NR_003606,NR_003695,NR_036658,NR_036659,NM_021035,NR_003030	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,+,+,+,+,+,+,-,+	NCRNA00275,NCRNA00275,SNORD12C,NCRNA00275,SNORD12B,NCRNA00275,NCRNA00275,ZNFX1,SNORD12	-3341,-3341,-2574,-3341,-1206,-3341,-2877,-3249,-836
chr10:27149874-27150197	chr10	+	27149966	27150243	True	NM_001178119,NM_005470,NM_001178116,NM_001178120,NM_001178121,NM_001178122,NM_001178123,NM_001178124,NM_001178125,NM_014317,NM_001012750,NM_001012751,NM_001012752	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,-,-,-,-,-,+,-,-,-	ABI1,ABI1,ABI1,ABI1,ABI1,ABI1,ABI1,ABI1,ABI1,PDSS1,ABI1,ABI1,ABI1	-26,-26,-26,-26,-26,-26,-26,-26,-26,-163422,-26,-26,-26
chr3:126234070-126235661	chr3	+	126234076	126235689	True	NM_152889,NM_001165974,NM_144639	chr3,chr3,chr3	+,-,-	CHST13,UROC1,UROC1	7486,977,977
chr6:72598544-72598860	chr6	+	72598556	72598872	True	NR_026807,NM_014989	chr6,chr6	-,+	C6orf155,RIMS1	-468108,-1957
chr7:65216393-65216826	chr7	+	65216418	65216717	True	NR_003110,NM_000181,NR_002961	chr7,chr7,chr7	+,-,+	CCT6P1,GUSB,SNORA22	-377,230634,3795
chr19:29707581-29708012	chr19	+	29707743	29708037	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	-251756,-3607
chr1:26798437-26798721	chr1	+	26798604	26798730	True	NM_005517,NM_173574	chr1,chr1	+,-	HMGN2,ZNF683	171,-99338
chr12:131354155-131355204	chr12	+	131354182	131355182	True	NM_194356,NM_006325	chr12,chr12	-,+	STX2,RAN	-30371,1434
chr19:11909956-11910470	chr19	+	11909993	11910421	True	NM_152356,NM_001080493	chr19,chr19	+,-	ZNF491,ZNF823	-660,-60233
chr1:113268901-113269118	chr1	+	113268907	113269155	True	NM_182759,NM_005167,NM_001004440	chr1,chr1,chr1	+,-,+	FAM19A3,PPM1J,FAM19A3	-5771,-10957,-5771
chr11:63381271-63381688	chr11	+	63381291	63381547	True	NM_006054,NM_001128203,NM_007069	chr11,chr11,chr11	+,-,-	RTN3,PLA2G16,PLA2G16	67374,444,412
chr4:9538622-9539102	chr4	+	9538696	9539120	True	NR_031688,NM_001040448	chr4,chr4	-,+	MIR548I2,DEFB131	18867,-92487
chrX:135332138-135332849	chrX	+	135332246	135332772	True	NM_024597,NM_001173516,NM_001173517,NM_153834	chrX,chrX,chrX,chrX	-,-,-,+	MAP7D3,MAP7D3,MAP7D3,GPR112	1016,5919,1016,50349
chr9:37035889-37036589	chr9	+	37036031	37036519	True	NM_016734,NR_036592	chr9,chr9	-,+	PAX5,LOC100506710	-1555,43373
chr17:14207191-14207412	chr17	+	14207200	14207404	True	NR_026880,NM_006041,NM_001007530	chr17,chr17,chr17	+,+,-	MGC12916,HS3ST3B1,CDRT15	-194,-2745,-67050
chr16:55692347-55693385	chr16	+	55692492	55693382	True	NM_001025194,NM_001172501,NM_001043,NM_001172504	chr16,chr16,chr16,chr16	-,+,+,+	CES1,SLC6A2,SLC6A2,SLC6A2	173743,-3001,-2191,-1987
chr11:71296520-71297859	chr11	+	71296572	71297890	True	NM_001012710,NM_001005405	chr11,chr11	+,-	KRTAP5-10,KRTAP5-11	-20014,-2651
chr2:44223180-44223594	chr2	+	44223223	44223625	True	NM_022437,NM_133259	chr2,chr2	+,-	ABCG8,LRPPRC	-157171,-79
chr19:44617447-44617796	chr19	+	44617543	44617693	True	NM_013362,NR_033341	chr19,chr19	+,-	ZNF225,LOC100379224	-46,-207
chr11:46354984-46356252	chr11	+	46354984	46356272	True	NM_000741,NM_201532	chr11,chr11	-,+	CHRM4,DGKZ	51885,-580
chr16:88773599-88774377	chr16	+	88773648	88774141	True	NM_001171816,NM_001171815,NM_001012759,NM_178841,NM_001012762	chr16,chr16,chr16,chr16,chr16	-,-,+,-,+	RNF166,RNF166,CTU2,RNF166,CTU2	-3623,-848,-808,-819,-808
chr7:5464024-5464356	chr7	+	5464043	5464302	True	NM_001080495,NM_153247	chr7,chr7	-,+	TNRC18,SLC29A4	-866,-141533
chr9:123547171-123548027	chr9	+	123547232	123548032	True	NR_027442,NM_012164	chr9,chr9	+,-	LOC100288842,FBXW2	7742,7758
chr17:33824332-33825131	chr17	+	33824469	33824927	True	NR_003037,NM_001195790	chr17,chr17	+,-	SNORD7,SLFN12L	75748,-9711
chr22:22901357-22901619	chr22	+	22901357	22901611	True	NR_027426,NM_006115,NM_206953,NM_206955,NM_206954,NM_206956	chr22,chr22,chr22,chr22,chr22,chr22	+,-,-,-,-,-	LOC648691,PRAME,PRAME,PRAME,PRAME,PRAME	144,135,135,5,135,5
chr8:142516192-142516440	chr8	+	142516314	142516462	True	NM_032611,NM_207414	chr8,chr8	+,-	PTP4A3,FLJ43860	-84368,918
chr13:20208141-20208514	chr13	+	20208208	20208480	True	NM_199254,NM_017520	chr13,chr13	-,+	TPTE2,MPHOSPH8	-97305,-471
chr1:47694606-47694807	chr1	+	47694610	47694854	True	NM_001010969,NM_003189	chr1,chr1	+,-	CYP4A22,TAL1	-91554,639
chr4:146859380-146859695	chr4	+	146859381	146859740	True	NM_007080,NM_178835	chr4,chr4	+,-	LSM6,ZNF827	237094,-83
chr11:133770513-133771376	chr11	+	133770545	133771269	True	NR_024344,NR_027276	chr11,chr11	-,+	LOC283174,LOC100128239	416,130897
chr14:65439389-65439833	chr14	+	65439432	65439852	True	NM_002028,NM_198686	chr14,chr14	+,-	FNTB,RAB15	13654,-557
chr22:21872105-21872348	chr22	+	21872261	21872325	True	NR_003700,NM_003347	chr22,chr22	-,+	PI4KAP2,UBE2L3	-481,49631
chr22:21872105-21872348	chr22	+	20428282	20428346	False	NR_003563,NR_026919	chr22,chr22	-,+	PI4KAP1,LOC150197	-29587,-234478
chr22:21872105-21872348	chr22	-	21771140	21771204	False	NM_015094,NR_003700	chr22,chr22	+,-	HIC2,PI4KAP2	488,100626
chr19:10219283-10219797	chr19	+	10219501	10219637	True	NM_002566,NM_031917,NM_001198690,NR_003688,NR_004381,NM_001040664,NM_020230	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+,+	P2RY11,ANGPTL6,PPAN-P2RY11,SNORD105B,SNORD105,PPAN-P2RY11,PPAN	2559,-6076,-2654,787,-1226,-2654,-2654
chr20:37588271-37588554	chr20	+	37588355	37588435	True	NM_001190809,NR_033905,NR_027124,NM_021931	chr20,chr20,chr20,chr20	+,+,-,+	DHX35,DHX35,LOC339568,DHX35	2545,2545,265016,2545
chr19:4336603-4336924	chr19	+	4336913	4336973	True	NM_001159846,NM_001013841,NM_032868,NM_017720	chr19,chr19,chr19,chr19	+,-,+,-	MPND,STAP2,MPND,STAP2	6550,1924,6550,1924
chr7:44080751-44081473	chr7	+	44081460	44081522	True	NR_024116,NM_001014436,NM_001122956,NR_015401,NM_014063,NR_024416	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,+,+	RASA4P,DBNL,DBNL,FLJ35390,DBNL,FLJ35390	-1238,2716,2716,-2813,2716,-2444
chr5:21462549-21463159	chr6	-	58284245	58284304	False	NM_000947,NR_003660	chr6,chr6	+,-	PRIM2,GUSBP4	-1101877,3470
chr5:21462549-21463159	chr5	+	21462983	21463175	True	NR_027027,NR_027026,NM_004061,NR_027028	chr5,chr5,chr5,chr5	+,+,-,+	GUSBP1,GUSBP1,CDH12,GUSBP1	-3445,-3445,1390606,-3445
chr1:161993168-161993447	chr1	+	161993170	161993434	True	NM_001164757,NM_015441	chr1,chr1	+,-	NOS1AP,OLFML2B	46146,260
chr2:128173631-128173903	chr2	+	128173636	128173920	True	NM_000312,NM_006609	chr2,chr2	+,-	PROC,MAP3K2	2075,-72866
chr10:11782842-11783398	chr10	+	11782859	11783298	True	NM_014688,NM_024693	chr10,chr10	-,+	USP6NL,ECHDC3	-129180,1057
chr1:6481149-6482493	chr1	+	6481246	6481860	True	NM_019089,NR_036218,NM_031475	chr1,chr1,chr1	-,-,+	HES2,MIR4252,ESPN	-1267,8146,2987
chr1:1383966-1384314	chr1	+	1384057	1384125	True	NR_026871,NM_001039211	chr1,chr1	-,+	LOC441869,ATAD3C	-27407,943
chr17:36349737-36350316	chr17	+	36349773	36350036	True	NM_032258,NM_001123391	chr17,chr17	-,-	TBC1D3F,TBC1D3	-1107,-1107
chr17:36349737-36350316	chr17	-	25743388	25743536	False	NR_033892,NM_000625	chr17,chr17	+,-	LOC440419,NOS2	1494,384167
chr3:43365892-43366748	chr3	+	43366133	43366631	True	NM_017719,NM_032806	chr3,chr3	+,-	SNRK,C3orf39	-38184,-218568
chr1:147243442-147243959	chr1	+	147243514	147243820	True	NM_005266,NM_005267	chr1,chr1	-,+	GJA5,GJA8	1714,131125
chr16:2511945-2512776	chr16	+	2512075	2512565	True	NM_001048212,NM_006181,NM_025108	chr16,chr16,chr16	-,+,+	CEMP1,NTN3,C16orf59	68894,8934,-2011
chr7:2599531-2600311	chr7	+	2599886	2600248	True	NM_001100390,NM_152558,NM_152743	chr7,chr7,chr7	+,+,-	IQCE,IQCE,BRAT1	-1305,-1305,-4494
chrX:46804300-46806110	chrX	+	46804672	46806150	True	NM_032591,NM_014735	chrX,chrX	-,+	SLC9A7,PHF16	-186200,-32857
chr3:129041524-129042260	chr3	+	129041813	129042227	True	NM_006026,NR_026991	chr3,chr3	-,+	H1FX,C3orf47	-6693,-6750
chr6:7537056-7537628	chr6	+	7537068	7537639	True	NM_004415,NM_001008844,NM_001170693	chr6,chr6,chr6	+,+,-	DSP,DSP,CAGE1	4230,4230,-147126
chr2:238535308-238535618	chr2	+	238535349	238535601	True	NM_001137550,NR_033308	chr2,chr2	+,-	LRRFIP1,RAB17	622,-35580
chr15:60866290-60866713	chr15	+	60866366	60866763	True	NM_134262,NM_012182	chr15,chr15	-,+	RORA,FOXB1	17995,-569996
chr9:96109482-96110024	chr9	+	96109623	96109882	True	NM_001098808,NM_014612	chr9,chr9	-,+	C9orf129,FAM120A	-927,104290
chr3:183414776-183415362	chr3	+	183414969	183415381	True	NM_024871,NM_018023	chr3,chr3	-,+	MAP6D1,YEATS2	128066,224
chr16:30106988-30107305	chr16	+	30107070	30107225	True	NR_027081,NM_004608,NM_001145524,NM_031477	chr16,chr16,chr16,chr16	+,-,-,-	LOC100271831,TBX6,YPEL3,YPEL3	18207,-3865,362,346
chr22:24110908-24111134	chr22	+	24110909	24111035	True	NM_213720,NM_005940,NM_182520	chr22,chr22,chr22	-,+,+	CHCHD10,MMP11,C22orf15	-768,4000,-5752
chr12:51632822-51633024	chr12	+	51632832	51633024	True	NM_014764,NM_001136269,NM_001136268,NR_026893,NM_001136264,NM_001136267,NM_001136266	chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,+,-,+,+,+	DAZAP2,DAZAP2,DAZAP2,POU6F1,DAZAP2,DAZAP2,DAZAP2	-375,-375,-375,-21355,-375,-375,-375
chr11:50256538-50256777	chr11	+	50256571	50256633	True	NR_024504,NR_003034	chr11,chr11	+,-	LOC646813,LOC441601	111684,1050
chr7:4920968-4921606	chr7	+	4921495	4921652	True	NM_018059,NR_015449	chr7,chr7	-,+	RADIL,RNF216L	1733,91963
chrX:153666062-153666924	chrX	+	153666256	153666915	True	NM_001009934,NM_004699,NM_001493,NM_001183	chrX,chrX,chrX,chrX	-,+,+,+	DNASE1L1,FAM50A,GDI1,ATP6AP1	-25829,5569,-1048,-9329
chr19:36642110-36642513	chr19	+	36642366	36642448	True	NM_001749,NM_001864	chr19,chr19	+,-	CAPNS1,COX7A1	-11499,1373
chr11:113847033-113847746	chr11	+	113847040	113847696	True	NM_000869,NM_213621,NM_001161772,NM_020886	chr11,chr11,chr11,chr11	+,+,+,-	HTR3A,HTR3A,HTR3A,USP28	-1294,-1294,525,-100784
chr10:70481500-70482401	chr10	+	70481635	70482328	True	NM_018237,NM_152707	chr10,chr10	+,-	CCAR1,SLC25A16	-715,-194355
chr8:11142752-11143620	chr8	+	11142771	11143351	True	NM_173683,NM_015458	chr8,chr8	-,+	XKR6,MTMR9	-83896,-822
chr7:101925888-101926212	chr7	+	101925956	101926078	True	NM_020979,NM_001146210	chr7,chr7	+,-	SH2B2,SPDYE6	2326,70861
chr16:31405306-31406495	chr16	+	31405541	31406364	True	NM_005353,NM_005205	chr16,chr16	+,-	ITGAD,COX6A2	-959,33436
chr7:117873914-117874565	chr7	+	117873974	117874536	True	NM_033427,NM_019644	chr7,chr7	-,+	CTTNBP2,ANKRD7	-360413,-9319
chr3:156391937-156392283	chr3	+	156391973	156392083	True	NM_015508,NM_001184718,NR_027954,NM_001184717	chr3,chr3,chr3,chr3	+,+,-,+	TIPARP,TIPARP,LOC100287227,TIPARP	121,2369,1469,631
chr8:48869935-48870161	chr8	+	48870000	48870072	True	NM_001081640,NM_182746,NM_006904,NM_005914	chr8,chr8,chr8,chr8	-,+,-,+	PRKDC,MCM4,PRKDC,MCM4	2729,2690,2729,2690
chr16:28957820-28958342	chr16	+	28957945	28958383	True	NM_024816,NM_032815	chr16,chr16	-,+	RABEP2,NFATC2IP	-21413,3934
chr8:16047699-16048352	chr8	+	16047778	16048194	True	NM_002445,NM_138716,NM_138715,NM_178234	chr8,chr8,chr8,chr8	-,-,-,+	MSR1,MSR1,MSR1,TUSC3	2162,2162,2162,-650238
chr7:130374114-130375982	chr7	+	130374225	130375104	True	NR_029899,NM_052933	chr7,chr7	+,-	MIR335,TSGA13	-238337,-2819
chr13:20034467-20035718	chr13	+	20034510	20035346	True	NR_034026,NM_001141968	chr13,chr13	+,-	LOC100287114,TPTE2	-115372,75607
chr13:20034467-20035718	chr13	-	24972339	24972685	False	NM_178540,NM_006437	chr13,chr13	+,-	C1QTNF9,PARP4	-88674,114320
chr17:38599054-38599269	chr17	+	38599058	38599286	True	NM_001552,NM_001067	chr17,chr17	+,-	IGFBP4,TOP2A	389,-24856
chr7:30175815-30177281	chr7	+	30175820	30177298	True	NM_017946,NM_152793	chr7,chr7	-,+	FKBP14,C7orf41	-109552,-1319
chr2:74700192-74700538	chr2	+	74700204	74700448	True	NM_001146158,NM_053050,NR_027749,NM_006302,NM_032779,NM_022492	chr2,chr2,chr2,chr2,chr2,chr2	-,-,+,-,-,+	MOGS,MRPL53,TTC31,MOGS,CCDC142,TTC31	-7667,-262,9751,-7667,9959,9751
chr4:153702682-153704315	chr4	+	153702798	153704192	True	NM_001025595,NM_014447,NM_145720,NM_001025593	chr4,chr4,chr4,chr4	+,+,-,+	ARFIP1,ARFIP1,TIGD4,ARFIP1	-1737,-1737,-1882,-1737
chr8:74662318-74663324	chr8	+	74662611	74662979	True	NM_001164381,NM_001164380,NM_001164383,NM_001164382,NM_001164385,NM_001164384,NM_001040613,NM_014393	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,-,-,+,-	STAU2,STAU2,STAU2,STAU2,STAU2,STAU2,TMEM70,STAU2	-3449,-3449,-3449,-3449,-3449,-2668,225397,-3449
chr3:160497613-160499443	chr3	+	160497613	160499474	True	NM_139245,NM_002268	chr3,chr3	+,-	PPM1L,KPNA4	-23668,-214237
chr11:18723513-18724556	chr11	+	18723705	18724419	True	NM_153347,NM_173588	chr11,chr11	+,-	TMEM86A,IGSF22	-3405,23408
chr18:14132450-14132805	chr18	+	14132514	14132838	True	NR_033354,NR_026756,NM_145287	chr18,chr18,chr18	-,+,-	ZNF519,LOC284233,ZNF519	-25,204583,-25
chr18:14132450-14132805	chr21	-	15399354	15399518	False	NR_027270,NM_144770	chr21,chr21	-,+	C21orf81,RBM11	-46589,188947
chr12:125473821-125474304	chr12	+	125473873	125474104	True	NM_032656,NM_080626	chr12,chr12	-,+	DHX37,BRI3BP	-206,4089
chr12:96393207-96393497	chr12	+	96393223	96393521	True	NM_152435,NM_002108	chr12,chr12	+,-	AMDHD1,HAL	-56203,-3152
chr1:226967323-226967872	chr1	+	226967404	226967798	True	NM_002221,NM_000447	chr1,chr1	-,+	ITPKB,PSEN2	-40528,90474
chrX:48936662-48937286	chrX	+	48936719	48937253	True	NM_007213,NM_001163323,NM_001029896	chrX,chrX,chrX	-,+,-	PRAF2,CCDC120,WDR45	-5057,-20247,361
chr1:154653119-154654177	chr1	+	154653325	154653981	True	NM_000748,NM_001025107	chr1,chr1	+,-	CHRNB2,ADAR	-113130,-52869
chr10:115514403-115515389	chr10	+	115514676	115515168	True	NM_001193435,NM_001193434,NM_198060,NM_024889,NM_182601	chr10,chr10,chr10,chr10,chr10	+,+,-,+,+	C10orf81,C10orf81,NRAP,C10orf81,C10orf81	-3514,-3514,-90871,-3514,9409
chr7:33137525-33137968	chr7	+	33137597	33137931	True	NM_001033604,NM_203288	chr7,chr7	+,-	BBS9,RP9	31220,11121
chr6:293329-294473	chr6	+	293371	294452	True	NM_020185,NM_148959	chr6,chr6	+,-	DUSP22,HUS1B	-1321,362562
chr4:183062358-183063202	chr4	+	183062391	183063212	True	NR_031640,NR_027107	chr4,chr4	+,-	MIR1305,MGC45800	27233,2513
chr2:208993031-208994305	chr2	+	208993248	208994290	True	NM_020989,NM_006891,NM_001178000	chr2,chr2,chr2	-,-,+	CRYGC,CRYGD,PIKFYVE	314,-3935,136700
chr11:93472136-93474109	chr11	+	93472386	93474055	True	NR_003026,NR_002920,NM_024116,NR_031639,NR_002973,NR_003028,NR_003036,NM_014039,NR_002959,NR_003032,NR_003033	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,-,-,-,+,-,-,-	SNORA1,SNORA8,TAF1D,MIR1304,SNORA40,SNORA25,SNORD6,C11orf54,SNORA18,SNORA32,SNORD5	-7087,-6721,699,-5456,-3984,-8574,-7647,737,-5623,-8121,-5920
chr19:4868494-4869282	chr19	+	4868503	4869167	True	NM_005817,NM_001048201,NM_001164189,NM_001164194	chr19,chr19,chr19,chr19	-,+,-,-	PLIN3,UHRF1,PLIN3,PLIN3	-723,40342,-723,-723
chr2:25013336-25014087	chr2	+	25013345	25013763	True	NM_001013663,NM_001199803,NM_024322	chr2,chr2,chr2	-,+,+	C2orf79,CENPO,CENPO	2538,2411,2567
chr11:47613366-47615308	chr11	+	47613460	47614992	True	NM_001164379,NM_031909	chr11,chr11	+,-	FAM180B,C1QTNF4	-5281,1019
chr11:114277242-114277473	chr11	+	114277338	114277477	True	NM_016090,NM_019021	chr11,chr11	+,-	RBM7,C11orf71	-6016,-6199
chr9:87285615-87286992	chr9	+	87285806	87286974	True	NM_006180,NM_022127,NM_001007097,NM_001018064,NM_001018065,NM_001018066	chr9,chr9,chr9,chr9,chr9,chr9	+,-,+,+,+,+	NTRK2,SLC28A3,NTRK2,NTRK2,NTRK2,NTRK2	-2391,-302393,-1231,-2391,-1262,-1262
chr4:1204223-1204529	chr4	+	1204265	1204523	True	NM_001199021,NR_033339,NR_024569	chr4,chr4,chr4	-,+,-	SPON2,C4orf42,LOC100130872	-1515,38704,-1515
chr3:101519918-101520242	chr3	+	101519949	101520195	True	NM_001134456,NM_000986	chr3,chr3	+,-	FAM55C,RPL24	-21714,-114386
chr1:145609241-145609909	chr1	+	145609270	145609717	True	NM_014455,NM_006468	chr1,chr1	+,-	RNF115,POLR3C	1318,1226
chr17:43681072-43681564	chr17	+	43681203	43681272	True	NR_026901,NR_037772	chr17,chr17	-,+	LOC644172,CRHR1	-1455,16437
chr13:58206525-58206755	chr13	+	58206554	58206770	True	NM_001040429,NM_030932	chr13,chr13	+,-	PCDH17,DIAPH3	-816,2380623
chr17:77068773-77069611	chr17	+	77068811	77069531	True	NM_138793,NM_001042573	chr17,chr17	-,+	CANT1,ENGASE	-62912,1487
chr8:124736758-124737679	chr8	+	124736916	124737723	True	NM_144963,NM_001003954	chr8,chr8	+,-	FAM91A1,ANXA13	43158,11981
chr1:78228426-78228790	chr1	+	78228511	78228768	True	NM_015017,NM_201626,NM_198549,NM_201624	chr1,chr1,chr1,chr1	-,-,+,-	USP33,USP33,FAM73A,USP33	-2974,-2974,16540,-2974
chr2:23691634-23691856	chr2	+	23691640	23691896	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	458088,-83393
chr3:121657600-121658744	chr3	+	121657773	121658628	True	NM_021082,NM_175924	chr3,chr3	+,-	SLC15A2,ILDR1	-44653,82550
chr16:2652066-2653304	chr16	+	2652083	2653219	True	NR_036139,NR_015441	chr16,chr16	-,+	MIR3178,LOC652276	-70077,165
chr4:53728463-53728719	chr4	+	53728533	53728715	True	NM_022832,NM_023940	chr4,chr4	-,+	USP46,RASL11B	-203031,-89
chrX:20158090-20159383	chrX	+	20158251	20159294	True	NR_023358,NM_001173456,NM_001412	chrX,chrX,chrX	-,+,-	SCARNA9L,PDHA1,EIF1AX	-3720,-796292,722
chr10:43135676-43136481	chr10	+	43135980	43136520	True	NM_014753,NM_006955	chr10,chr10	+,-	BMS1,ZNF33B	141433,-1988
chr11:118549968-118550981	chr11	+	118550406	118550842	True	NM_001144759,NM_007180	chr11,chr11	+,-	PHLDB1,TREH	-72151,-25
chr19:45842319-45843145	chr19	+	45842461	45843185	True	NM_177417,NM_001824	chr19,chr19	+,-	KLC3,CKM	812,-16228
chr2:219837045-219838329	chr2	+	219837256	219838358	True	NR_015390,NM_017521,NR_024385	chr2,chr2,chr2	+,-,+	LOC151300,FEV,LOC151300	2647,12071,2647
chr2:77726528-77727207	chr2	+	77726635	77727229	True	NM_001134745,NM_198448	chr2,chr2	-,+	LRRTM4,REG3G	22323,1525596
chr12:52914295-52914981	chr12	+	52914344	52914897	True	NM_002284,NM_000424	chr12,chr12	+,-	KRT86,KRT5	-218746,-101
chr17:79852208-79852684	chr17	+	79852250	79852582	True	NM_016476,NM_005782,NM_001002249,NM_001002248,NM_001002247,NM_001002246,NM_001002245,NM_001002244,NM_148896	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,-,+,+,+,+,+,+,+	ANAPC11,THOC4,ANAPC11,ANAPC11,ANAPC11,ANAPC11,ANAPC11,ANAPC11,NPB	-2702,-2788,-2483,-2702,-2702,-2702,-2702,-2702,7489
chr15:75119452-75120234	chr15	+	75119475	75120271	True	NM_001030005,NM_001099436	chr15,chr15	+,-	CPLX3,ULK3	-575,15331
chr12:122515110-122515330	chr12	+	122515187	122515379	True	NM_014938,NM_001014336	chr12,chr12	+,-	MLXIP,IL31	1380,143417
chr19:39418963-39419168	chr19	+	39419120	39419219	True	NM_017827,NM_001145901,NM_021107,NM_033362,NM_033363	chr19,chr19,chr19,chr19,chr19	-,-,+,+,+	SARS2,SARS2,MRPS12,MRPS12,MRPS12	2372,2372,2374,2128,2374
chr15:76005450-76005963	chr15	+	76005731	76005939	True	NM_175881,NM_001897	chr15,chr15	+,-	ODF3L1,CSPG4	10379,-542
chr17:2700802-2701090	chr17	+	2700856	2701030	True	NM_001100398,NM_015085,NR_031654	chr17,chr17,chr17	+,+,-	RAP1GAP2,RAP1GAP2,MIR1253	-1175,-1175,-49380
chr6:18409581-18410095	chr6	+	18409652	18409797	True	NM_182757,NM_003472	chr6,chr6	+,-	RNF144B,DEK	-22130,-144853
chr5:118301338-118303090	chr5	+	118301760	118303108	True	NM_173666,NR_036263,NR_036262,NR_036052	chr5,chr5,chr5,chr5	-,+,+,+	DTWD2,MIR1244-3,MIR1244-2,MIR1244-1	21191,7172,7172,7172
chr9:19244660-19245387	chr9	+	19244783	19245083	True	NR_038064,NM_017925	chr9,chr9	-,+	PLIN2,DENND4C	-117179,45665
chr5:68855426-68855842	chr5	+	68855590	68855868	True	NR_027439,NM_001042490,NM_001098728	chr5,chr5,chr5	-,+,+	LOC100272216,GTF2H2D,GTF2H2C	73210,205,182
chr5:68855426-68855842	chr5	+	69710809	69710995	False	NR_033417,NR_033968	chr5,chr5	+,-	GTF2H2B,LOC100049076	201,140205
chr5:68855426-68855842	chr5	-	70363702	70363888	False	NM_022877,NM_001515	chr5,chr5	+,-	SMN2,GTF2H2	-142985,-205
chrX:135287442-135289368	chrX	+	135287562	135289216	True	NM_001173517,NM_001159701,NM_001159699	chrX,chrX,chrX	-,+,+	MAP7D3,FHL1,FHL1	44572,-8713,-8571
chr7:134917723-134918592	chr7	+	134917786	134918456	True	NM_014149,NM_182489	chr7,chr7	-,+	WDR91,STRA8	-21470,-1106
chr13:102570661-102572250	chr13	+	102570778	102572176	True	NM_004115,NM_004791	chr13,chr13	-,+	FGF14,ITGBL1	-1783,-465863
chr1:33637675-33638158	chr1	+	33637682	33637914	True	NM_152493,NM_018207	chr1,chr1	+,-	ZNF362,TRIM62	84259,9807
chr4:1898387-1898617	chr4	+	1898571	1898631	True	NM_007331,NM_012318,NM_133330,NM_133331,NM_133334,NM_133335	chr4,chr4,chr4,chr4,chr4,chr4	+,-,+,+,+,+	WHSC1,LETM1,WHSC1,WHSC1,WHSC1,WHSC1	-4113,-40597,-4113,-4113,3721,-4113
chr6:5972574-5974431	chr6	+	5972821	5974421	True	NM_016588,NM_004271	chr6,chr6	-,+	NRN1,LY86	33262,614512
chr11:18268296-18268574	chr11	+	18268360	18268534	True	NM_001127380,NM_001199744,NM_030754,NM_000331,NM_006512	chr11,chr11,chr11,chr11,chr11	-,-,-,+,-	SAA2,SAA2-SAA4,SAA2,SAA1,SAA4	1737,1737,1737,19273,-9976
chr11:18268296-18268574	chr11	-	18289604	18289654	False	NM_000331,NM_001178006,NM_199161,NM_030754	chr11,chr11,chr11,chr11	+,+,+,-	SAA1,SAA1,SAA1,SAA2	-1847,-1847,-1847,-19383
chr11:1074365-1074584	chr11	+	1074447	1074579	True	NM_002457,NM_005961	chr11,chr11	+,-	MUC2,MUC6	295,-37741
chr17:79345364-79346079	chr17	+	79345367	79345769	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	27770,-40893
chr18:65943844-65945198	chr18	+	65944043	65944979	True	NM_019022,NM_001093729	chr18,chr18	-,+	TMX3,CCDC102B	437432,437511
chr19:2149509-2150750	chr19	+	2149819	2150706	True	NM_001077523,NM_003938,NM_032482	chr19,chr19,chr19	-,-,+	AP3D1,AP3D1,DOT1L	900,900,13441
chrX:48057358-48058800	chrX	+	48058060	48058316	True	NM_175723,NM_021015,NM_005635	chrX,chrX,chrX	-,-,+	SSX5,SSX5,SSX1	-1861,-1861,56480
chrX:48057358-48058800	chrX	+	48167546	48167599	False	NM_021014,NM_005635	chrX,chrX	-,+	SSX3,SSX1	48596,-52803
chr10:27154168-27154808	chr10	+	27154528	27154682	True	NM_001178119,NM_005470,NM_001178116,NM_001178120,NM_001178121,NM_001178122,NM_001178123,NM_001178124,NM_001178125,NM_014317,NM_001012750,NM_001012751,NM_001012752	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,-,-,-,-,-,+,-,-,-	ABI1,ABI1,ABI1,ABI1,ABI1,ABI1,ABI1,ABI1,ABI1,PDSS1,ABI1,ABI1,ABI1	-4512,-4512,-4512,-4512,-4512,-4512,-4512,-4512,-4512,-167989,-4512,-4512,-4512
chr1:154178337-154179859	chr1	+	154178614	154179823	True	NM_001010979,NM_001127320	chr1,chr1	-,+	C1orf189,UBAP2L	-7,12831
chr19:20713838-20714090	chr19	+	20714079	20714139	True	NM_001159293,NR_034060	chr19,chr19	-,+	ZNF737,ZNF85	34537,391919
chr17:4891252-4892781	chr17	+	4891321	4892767	True	NM_001171168,NM_015099,NM_001167986,NM_001167987,NM_006612,NM_001167985,NM_001171167,NM_001171166,NM_213726	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,+,-,-,-,-	CAMTA2,CAMTA2,INCA1,INCA1,KIF1C,INCA1,CAMTA2,CAMTA2,INCA1	-656,-361,8188,8188,8475,8188,-656,-361,8188
chr2:183730932-183731194	chr2	+	183730939	183731103	True	NM_018981,NM_001463	chr2,chr2	+,-	DNAJC10,FRZB	-149991,445
chr2:3640744-3642201	chr2	+	3640966	3642225	True	NM_199235,NM_002936,NM_024027	chr2,chr2,chr2	+,-,+	COLEC11,RNASEH1,COLEC11	411,-35026,411
chr3:109129922-109130271	chr3	+	109130105	109130282	True	NM_018189,NM_001145553	chr3,chr3	-,+	DPPA4,FLJ25363	-73686,-1327
chr17:3495694-3495933	chr17	+	3495849	3495933	True	NM_080705,NM_080706,NM_018727,NM_001031681	chr17,chr17,chr17,chr17	-,-,-,+	TRPV1,TRPV1,TRPV1,CTNS	3242,288,4453,43828
chr6:170124344-170124582	chr6	+	170124377	170124609	True	NM_018288,NM_133325,NM_001029863	chr6,chr6,chr6	-,-,+	PHF10,PHF10,C6orf120	-271,-271,-22171
chr10:15002745-15003629	chr10	+	15003064	15003470	True	NM_001080836,NM_001033858,NM_022487,NM_001033857,NM_001033855	chr10,chr10,chr10,chr10,chr10	+,-,-,-,-	MEIG1,DCLRE1C,DCLRE1C,DCLRE1C,DCLRE1C	-1684,-6970,-6970,-6970,-6970
chr15:64680360-64680596	chr15	+	64680371	64680451	True	NM_001029989,NM_016213,NM_014736	chr15,chr15,chr15	-,+,-	KIAA0101,TRIP4,KIAA0101	-6669,-421,-6669
chr10:27267307-27267871	chr10	+	27267416	27267833	True	NR_026795,NM_001172303	chr10,chr10	-,+	NCRNA00202,MASTL	-36486,175919
chr2:20211127-20212046	chr2	+	20211191	20211847	True	NR_033875,NM_002381	chr2,chr2	+,-	FLJ12334,MATN3	-142627,658
chr16:473561-474069	chr16	+	473940	474018	True	NM_014700,NM_021259	chr16,chr16	+,-	RAB11FIP3,TMEM8A	1649,-41990
chr1:12818484-12819016	chr1	+	12818629	12819037	True	NM_001146344,NM_152290	chr1,chr1	-,+	PRAMEF11,C1orf158	72277,-12517
chr8:67965961-67967561	chr8	+	67966286	67967530	True	NM_024790,NM_006837	chr8,chr8	+,-	CSPP1,COPS5	9072,7083
chr2:10585484-10585852	chr2	+	10585488	10585580	True	NM_002539,NM_134421,NR_028374	chr2,chr2,chr2	-,+,-	ODC1,HPCAL1,SNORA80B	2931,-141718,1453
chr14:69446773-69447011	chr14	+	69446788	69447062	True	NM_001130004,NM_001193360,NM_001130005,NM_001102	chr14,chr14,chr14,chr14	-,+,-,-	ACTN1,EXD2,ACTN1,ACTN1	-705,211131,-705,-705
chr6:108282374-108282688	chr6	+	108282526	108282610	True	NM_007214,NM_003269	chr6,chr6	-,+	SEC63,NR2E1	-3044,204604
chr15:24801791-24802631	chr15	+	24802033	24802603	True	NR_026646,NR_026647	chr15,chr15	+,-	PWRN1,PWRN2	700,-386980
chr19:12805731-12806313	chr19	+	12805732	12806350	True	NM_032301,NM_032332	chr19,chr19	-,+	FBXW9,WDR83	1155,-25266
chr9:139921811-139922099	chr9	+	139921941	139922065	True	NM_004479,NM_001606,NM_212533,NM_207511	chr9,chr9,chr9,chr9	-,-,-,+	FUT7,ABCA2,ABCA2,C9orf139	5277,725,1359,-76
chr7:23763994-23764403	chr7	+	23764095	23764445	True	NM_032944,NR_002711	chr7,chr7	+,-	STK31,CLK2P	-14149,-137949
chr9:136343103-136343621	chr9	+	136343173	136343564	True	NM_017586,NM_001145099,NM_017585	chr9,chr9,chr9	+,-,-	C9orf7,SLC2A6,SLC2A6	-18137,762,762
chr12:96589698-96589974	chr12	+	96589757	96589943	True	NM_000895,NM_005230	chr12,chr12	-,+	LTA4H,ELK3	-160392,-1601
chr14:23302309-23302921	chr14	+	23302410	23302742	True	NM_004995,NM_181304,NM_181305,NM_181306,NM_181307,NM_180982,NM_001126106,NM_178336	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,+,+,+,-,+	MMP14,MRPL52,MRPL52,MRPL52,MRPL52,MRPL52,SLC7A7,MRPL52	3050,-3378,-3378,-3378,-3378,-3378,-13396,-3378
chr15:82554428-82554671	chr15	+	82554586	82554690	True	NM_024580,NM_001008226,NM_001040610	chr15,chr15,chr15	-,+,-	EFTUD1,FAM154B,EFTUD1	464,461,464
chr17:79210850-79211210	chr17	+	79210854	79211240	True	NM_144679,NM_001086521	chr17,chr17	-,+	C17orf56,C17orf89	1701,1870
chr19:36642615-36642863	chr19	+	36642750	36642826	True	NM_001749,NM_001864	chr19,chr19	+,-	CAPNS1,COX7A1	-11883,995
chr13:67801708-67802882	chr13	+	67801715	67802682	True	NR_002717,NM_020403,NM_203487	chr13,chr13,chr13	+,-,-	ATXN8OS,PCDH9,PCDH9	2878662,1836,1836
chr17:79339635-79340157	chr17	+	79339659	79340079	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	33460,-35185
chr6:33421178-33421651	chr6	+	33421264	33421681	True	NM_152735,NM_015921	chr6,chr6	+,-	ZBTB9,CUTA	674,-35199
chr6:33421178-33421651	chr6_ssto_hap7	+	4901508	4901925	False	NM_001014840	chr6_ssto_hap7	-	CUTA	-35197
chr12:4793737-4794572	chr12	+	4793814	4794504	True	NM_006422,NM_005002,NM_017417	chr12,chr12,chr12	-,+,+	AKAP3,NDUFA9,GALNT8	-39471,-35601,35247
chr13:25672212-25674135	chr13	+	25672972	25673812	True	NM_152704,NM_030979	chr13,chr13	-,+	FAM123A,PABPC3	72101,-2758
chr17:31256422-31257939	chr17	+	31256565	31257678	True	NM_001033504,NM_015544,NM_015194	chr17,chr17,chr17	+,+,-	TMEM98,TMEM98,MYO1D	-1688,-1688,-52663
chr17:46656091-46657924	chr17	+	46656366	46657976	True	NM_024015,NR_033202,NR_029608,NM_002146,NR_033201	chr17,chr17,chr17,chr17,chr17	-,+,-,-,+	HOXB4,LOC404266,MIR10A,HOXB3,LOC404266	-623,9865,-171,-4556,9846
chr2:95537842-95538241	chr2	+	95537885	95538189	True	NR_003366,NM_144705	chr2,chr2	-,+	ANKRD20A8P,TEKT4	-15065,-704
chr12:49185167-49185926	chr12	+	49185519	49185975	True	NM_000725,NM_020983,NM_015270	chr12,chr12,chr12	+,-,-	CACNB3,ADCY6,ADCY6	26536,-2699,-7642
chr12:8019729-8021460	chr12	+	8020058	8021200	True	NM_153449,NM_024865	chr12,chr12	-,+	SLC2A14,NANOG	4345,-78124
chr4:87516326-87516526	chr4	+	87516325	87516533	True	NM_080685,NM_080684,NM_006264,NM_080683,NM_002753	chr4,chr4,chr4,chr4,chr4	+,+,+,+,-	PTPN13,PTPN13,PTPN13,PTPN13,MAPK10	-909,-909,-909,-909,-142042
chr15:40595577-40596842	chr15	+	40595584	40596736	True	NM_004573,NM_001145643	chr15,chr15	-,+	PLCB2,PHGR1	3488,46497
chr7:128162803-128164588	chr7	+	128163539	128164415	True	NM_183243,NM_018396	chr7,chr7	-,+	IMPDH1,METTL2B	-113503,-46807
chr6:43200586-43200948	chr6	+	43200613	43200675	True	NM_006443,NM_199184,NM_032538	chr6,chr6,chr6	-,-,+	C6orf108,C6orf108,TTBK1	-3402,-3402,10546
chr1:47779782-47780021	chr1	+	47779805	47780055	True	NM_001136140,NM_001048166,NM_003035	chr1,chr1,chr1	+,-,-	CMPK1,STIL,STIL	19413,4,4
chr1:114001062-114002976	chr1	+	114001061	114003019	True	NM_152900,NM_006608	chr1,chr1	+,-	MAGI3,PHTF1	-67645,298809
chr5:176556542-176558476	chr5	+	176556547	176558355	True	NM_172349,NM_022455,NM_001199298	chr5,chr5,chr5	+,+,-	NSD1,NSD1,UIMC1	1724,2477,-122752
chr9:15311951-15312547	chr9	+	15311963	15312509	True	NM_001168341,NM_001168340,NM_001039697,NM_001168339,NM_152574	chr9,chr9,chr9,chr9,chr9	-,-,+,-,-	TTC39B,TTC39B,SNAPC3,TTC39B,TTC39B	-4605,-4605,110272,-4605,-4605
chrX:48543888-48544172	chrX	+	48543932	48544200	True	NM_013271,NM_000377	chrX,chrX	-,+	PCSK1N,WAS	149810,-1797
chr1:44482418-44482860	chr1	+	44482425	44482899	True	NM_152499,NM_006934,NM_201649	chr1,chr1,chr1	+,-,-	CCDC24,SLC6A9,SLC6A9	-25196,148,148
chr4:25915266-25915563	chr4	+	25915314	25915544	True	NM_001145432,NM_015187	chr4,chr4	+,-	C4orf52,SEL1L3	269,-50704
chr10:90481998-90482995	chr10	+	90482079	90482545	True	NM_001080518,NM_144590	chr10,chr10	+,-	LIPK,ANKRD22	1755,129237
chr3:15635463-15636356	chr3	+	15635924	15636310	True	NM_000060,NM_012260	chr3,chr3	+,-	BTD,HACL1	6944,6870
chr8:145016913-145017232	chr8	+	145017023	145017121	True	NM_000837,NR_030383,NM_201384,NM_201381,NM_201380,NM_201383,NM_201382	chr8,chr8,chr8,chr8,chr8,chr8,chr8	+,-,-,-,-,-,-	GRINA,MIR661,PLEC,PLEC,PLEC,PLEC,PLEC	47104,2376,-3265,1834,7973,-331,1039
chr1:110081043-110081559	chr1	+	110081105	110081576	True	NM_006496,NM_031936,NM_020703	chr1,chr1,chr1	+,+,-	GNAI3,GPR61,AMIGO1	9609,917,-28769
chr12:63544964-63545286	chr12	+	63545080	63545282	True	NM_000706,NR_029661	chr12,chr12	-,+	AVPR1A,MIRLET7I	1358,-547665
chr10:43134232-43135475	chr10	+	43134264	43134965	True	NM_014753,NM_006955	chr10,chr10	+,-	BMS1,ZNF33B	142988,-272
chr4:187197489-187198036	chr4	+	187197505	187197578	True	NM_000128,NR_033900	chr4,chr4	+,-	F11,LOC285441	-10441,224687
chr6:37405225-37406589	chr6	+	37405389	37406566	True	NM_015050,NM_138493	chr6,chr6	+,-	FTSJD2,C6orf129	-4533,61198
chr8:146233072-146233315	chr8	+	146233072	146233196	True	NR_026974	chr8	+	C8orf77	-4926
chr7:148724247-148725187	chr7	+	148724347	148725093	True	NM_004911,NM_020781	chr7,chr7	-,+	PDIA4,ZNF398	739,98414
chr10:64019604-64021116	chr10	+	64019682	64020885	True	NM_014951,NM_145307	chr10,chr10	+,-	ZNF365,RTKN2	113030,7644
chr7:139168770-139169171	chr7	+	139168880	139168958	True	NM_198508,NM_001080511	chr7,chr7	-,+	KLRG2,CLEC2L	-423,39715
chrX:49397537-49398804	chrX	+	49397556	49398852	True	NM_003785,NM_001468	chrX,chrX	-,+	PAGE1,GAGE1	61794,-33992
chr7:43940837-43941357	chr7	+	43940888	43941230	True	NM_017920,NM_001204871,NM_001077663,NM_015983	chr7,chr7,chr7,chr7	-,-,-,+	URGCP,URGCP-MRPS24,URGCP,UBE2D4	5051,5051,5051,24804
chrX:151883248-151883570	chrX	+	151883316	151883424	True	NM_001129826,NM_004909,NM_005361,NM_175742,NM_001129828,NM_175743,NM_153488,NM_001080848	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,+,+,-,+,+,-	CSAG3,CSAG2,MAGEA2,MAGEA2,CSAG3,MAGEA2,MAGEA2B,CSAG2	-5646,-5569,-248,-248,-5569,-248,1959,-5569
chrX:151883248-151883570	chrX	-	151902850	151902900	False	NM_001166387,NM_001166386,NM_001102576,NM_005367,NM_153478	chrX,chrX,chrX,chrX,chrX	-,-,+,-,+	MAGEA12,MAGEA12,CSAG1,MAGEA12,CSAG1	334,251,327,334,327
chrX:151883248-151883570	chrX	-	151922058	151922166	False	NM_001129826,NM_004909,NM_005361,NM_175742,NM_001129828,NM_175743,NM_153488,NM_001080848	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,-,-,+,-,-,+	CSAG3,CSAG2,MAGEA2,MAGEA2,CSAG3,MAGEA2,MAGEA2B,CSAG2	5644,5567,248,248,5567,248,-1959,5567
chr19:49576639-49576953	chr19	+	49576654	49576982	True	NM_031886,NM_006179,NM_003089	chr19,chr19,chr19	-,-,+	KCNA7,NTF4,SNRNP70	-456,-9530,11482
chr1:28587268-28588566	chr1	+	28587395	28588097	True	NM_031459,NM_014280	chr1,chr1	+,-	SESN2,DNAJC8	-1484,-27853
chr22:29876993-29877218	chr22	+	29877008	29877152	True	NR_002727,NM_021076	chr22,chr22	-,+	RFPL1S,NEFH	-38890,-878
chr8:121477990-121478542	chr8	+	121478092	121478368	True	NM_022045,NM_014078	chr8,chr8	+,-	MTBP,MRPL13	-20489,-20445
chr1:205091056-205091322	chr1	+	205091061	205091361	True	NM_001193273,NM_001193272,NM_005076,NM_005057	chr1,chr1,chr1,chr1	-,-,+,-	RBBP5,RBBP5,CNTN2,RBBP5	-15,-15,-78772,-15
chr4:49320823-49322183	chr4	+	49320957	49321985	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-332743,-412142
chr4:49320823-49322183	chr4	-	49297441	49298469	False	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-309229,-388626
chr4:49320823-49322183	chr4	-	49303577	49304605	False	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-315365,-394762
chr5:89769946-89770466	chr5	+	89770010	89770418	True	NM_006467,NM_203406	chr5,chr5	+,-	POLR3G,MBLAC2	262,217
chr22:35844807-35845665	chr22	+	35844862	35845710	True	NM_005368,NM_006739	chr22,chr22	-,+	MB,MCM5	167724,-48797
chr6:134665763-134666048	chr6	+	134665944	134666014	True	NM_004865,NM_001143676	chr6,chr6	+,-	TBPL1,SGK1	-391700,-26748
chr17:80478427-80479207	chr17	+	80478488	80478969	True	NR_036519,NM_004514	chr17,chr17	-,+	C17orf62,FOXK2	-69781,-945
chr1:226075827-226076057	chr1	+	226075847	226076087	True	NM_020997,NM_000120,NM_014698	chr1,chr1,chr1	-,+,-	LEFTY1,EPHX1,TMEM63A	809,-62896,-5427
chr1:226075827-226076057	chr1	+	226127817	226127885	False	NM_003240,NM_000120,NM_001172425	chr1,chr1,chr1	-,+,-	LEFTY2,EPHX1,LEFTY2	1248,-114866,1248
chr2:6072137-6072684	chr2	+	6072141	6072596	True	NM_207315,NR_026832	chr2,chr2	-,+	CMPK2,LOC150622	933397,222
chrX:132098039-132098336	chrX	+	132098091	132098322	True	NM_001077188,NM_001042452,NM_147175	chrX,chrX,chrX	-,+,-	HS6ST2,MST4,HS6ST2	-2668,-940507,-2668
chr19:42636725-42637279	chr19	+	42636792	42637316	True	NM_022752,NM_002698,NR_036208	chr19,chr19,chr19	+,-,-	ZNF574,POU2F2,MIR4323	-56553,-162,399
chr10:104177759-104178389	chr10	+	104177859	104178203	True	NM_002779,NM_024326	chr10,chr10	-,+	PSD,FBXL15	748,1367
chr12:57081633-57081862	chr12	+	57081837	57081905	True	NM_003725,NM_006601	chr12,chr12	+,-	HSD17B6,PTGES3	75202,223
chr17:13984948-13985516	chr17	+	13985140	13985527	True	NM_001007530,NM_001303	chr17,chr17	-,+	CDRT15,COX10	154676,-12473
chr8:144239984-144240722	chr8	+	144240024	144240760	True	NM_178172,NM_001135655,NM_002347,NM_001130478	chr8,chr8,chr8,chr8	+,-,-,-	GPIHBP1,LY6H,LY6H,LY6H	54307,1045,747,1343
chr9:131870390-131870902	chr9	+	131870678	131870946	True	NR_028048,NM_000755,NM_178000,NM_021131,NM_178003,NM_001193397,NM_178001	chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,-,+,+,+,+,+	CRAT,CRAT,PPP2R4,PPP2R4,PPP2R4,PPP2R4,PPP2R4	2174,2174,2646,2281,2646,3020,2646
chr12:102269224-102270497	chr12	+	102269302	102270322	True	NM_018370,NM_024312	chr12,chr12	+,-	DRAM1,GNPTAB	782,-44657
chr11:82399211-82400661	chr11	+	82399399	82400518	True	NM_145018,NM_175885	chr11,chr11	+,-	C11orf82,FAM181B	212218,44441
chr19:9939950-9940570	chr19	+	9940483	9940555	True	NM_001048241,NM_024292,NM_006221,NM_017703	chr19,chr19,chr19,chr19	+,+,+,-	UBL5,UBL5,PIN1,FBXL12	-1969,-1969,5443,-10752
chr2:135621248-135623011	chr2	+	135621305	135623025	True	NM_138326,NR_036549	chr2,chr2	+,-	ACMSD,LOC100129961	-25170,53201
chrX:152952324-152952775	chrX	+	152952336	152952552	True	NM_001039582,NM_001142806,NM_005629,NM_001142805	chrX,chrX,chrX,chrX	-,+,+,+	PNCK,SLC6A8,SLC6A8,SLC6A8	-12520,2413,1199,1199
chr10:76970524-76970750	chr10	+	76970545	76970797	True	NM_001184783,NM_001184823,NM_144589,NM_003375,NR_033675	chr10,chr10,chr10,chr10,chr10	+,+,-,+,+	VDAC2,VDAC2,COMTD1,VDAC2,VDAC2	-296,-684,25023,-296,-296
chr5:86565073-86565774	chr5	+	86565109	86565785	True	NM_001199189,NM_002890,NM_022650	chr5,chr5,chr5	-,+,+	CCNH,RASA1,RASA1	142986,-1012,-397
chr11:124823460-124823804	chr11	+	124823517	124823851	True	NM_152722,NM_025004	chr11,chr11	-,+	HEPACAM,CCDC15	-17209,165
chr3:52231345-52231689	chr3	+	52231350	52231680	True	NM_017442,NM_199166,NM_000688	chr3,chr3,chr3	-,+,+	TLR9,ALAS1,ALAS1	28549,435,463
chr3:38980349-38981114	chr3	+	38980977	38981121	True	NM_020839,NM_014139	chr3,chr3	+,-	WDR48,SCN11A	112385,10981
chr10:1032952-1033863	chr10	+	1033037	1033830	True	NM_033261,NM_012341	chr10,chr10	-,+	IDI2,GTPBP4	38019,518
chr5:118601708-118603104	chr5	+	118601756	118603141	True	NM_173666,NM_001077654	chr5,chr5	-,+	DTWD2,TNFAIP8	-277516,1276
chr2:233245134-233245589	chr2	+	233245157	233245631	True	NR_028501,NM_001632	chr2,chr2	-,+	ECEL1P2,ALPP	6173,-1860
chr2:233245134-233245589	chr2	+	233272784	233273712	False	NM_031313,NR_028501	chr2,chr2	+,-	ALPPL2,ECEL1P2	-1737,-21030
chr9:80263851-80265501	chr9	+	80263917	80265276	True	NM_004297,NM_033305	chr9,chr9	-,+	GNA14,VPS13A	-685,-471607
chr9:22005830-22006094	chr9	+	22005830	22005896	True	NR_003529,NM_004936,NM_078487	chr9,chr9,chr9	+,-,-	CDKN2B-AS1,CDKN2B,CDKN2B	-11091,3466,3466
chr5:122859290-122860277	chr5	+	122859289	122860131	True	NM_004384,NM_153223	chr5,chr5	+,-	CSNK1G3,CEP120	-11550,-100003
chr12:54021251-54021753	chr12	+	54021472	54021678	True	NM_006856,NM_001130060,NM_134324	chr12,chr12,chr12	-,-,+	ATF7,ATF7,TARBP2	-1273,-1273,-126159
chr17:40273291-40273567	chr17	+	40273386	40273596	True	NM_024119,NM_021078,NM_033194	chr17,chr17,chr17	-,-,+	DHX58,KAT2A,HSPB9	-8635,-4,1159
chr19:42383462-42383750	chr19	+	42383669	42383729	True	NM_198977,NM_001783,NM_021601,NM_004706,NM_199002,NM_173506	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,-	ARHGEF1,CD79A,CD79A,ARHGEF1,ARHGEF1,LYPD4	3537,-2530,-2530,3537,4716,-35161
chr1:15252035-15253738	chr1	+	15252091	15253755	True	NM_001018000,NM_001018001,NR_027136	chr1,chr1,chr1	+,+,-	KAZN,KAZN,C1orf126	-1517,2540,225255
chr3:13007185-13008427	chr3	+	13007223	13008411	True	NM_014869,NM_012298	chr3,chr3	-,+	IQSEC1,CAND2	599,-169103
chr21:37758584-37759305	chr21	+	37758733	37759359	True	NM_012130,NM_005441	chr21,chr21	-,+	CLDN14,CHAF1B	79422,-1095
chr9:72438908-72439235	chr9	+	72438940	72439288	True	NM_001099666,NM_001010940	chr9,chr9	-,+	PTAR1,C9orf135	-64064,-3260
chr7:20824986-20825208	chr7	+	20824995	20825257	True	NM_182700,NR_026673,NM_198956	chr7,chr7,chr7	-,+,-	SP8,RPL23P8,SP8	1301,41659,1301
chr12:51612378-51612771	chr12	+	51612424	51612742	True	NR_026893,NM_001136264	chr12,chr12	-,+	POU6F1,DAZAP2	-947,19765
chr7:148298187-148299134	chr7	+	148298279	148299182	True	NM_145304,NM_001203249	chr7,chr7	+,-	C7orf33,EZH2	-10674,281469
chr8:108455535-108455752	chr8	+	108455539	108455673	True	NM_001198535,NM_001146	chr8,chr8	+,-	OXR1,ANGPT1	-717255,54641
chr10:101989721-101990022	chr10	+	101989934	101990075	True	NM_005063,NR_002954,NM_001278	chr10,chr10,chr10	+,-,-	SCD,SNORA12,CHUK	116696,7039,-590
chrX:18881433-18882920	chrX	+	18881825	18882851	True	NM_000292,NR_029379	chrX,chrX	-,+	PHKA2,LOC100132163	119686,25562
chr7:76103397-76104044	chr7	+	76103661	76103983	True	NR_003262,NM_001102596	chr7,chr7	-,+	FDPSL2A,DTX2	392,5843
chr7:76103397-76104044	chr7	+	76601995	76602075	False	NR_023383,NM_006682	chr7,chr7	+,-	PMS2P11,FGL2	8063,227133
chr3:11611953-11612602	chr3	+	11611984	11612635	True	NM_006395,NM_001128221	chr3,chr3	+,-	ATG7,VGLL4	-298025,-1586
chr9:115082166-115083531	chr9	+	115082221	115083525	True	NM_001163788,NM_001195822	chr9,chr9	-,+	ROD1,HSDL2	12473,58663
chr6:133118659-133119501	chr6	+	133118850	133119509	True	NM_052831,NM_001016	chr6,chr6	-,+	C6orf192,RPS12	288,16198
chr22:37972911-37973447	chr22	+	37973082	37973148	True	NM_152243,NM_006498	chr22,chr22	+,-	CDC42EP1,LGALS2	-16662,2926
chr11:67205771-67206142	chr11	+	67205807	67206101	True	NM_020441,NM_001018070,NM_003952,NM_005608	chr11,chr11,chr11,chr11	-,-,+,-	CORO1B,CORO1B,RPS6KB2,PTPRCAP	4932,5212,-9923,-654
chr1:8486436-8487209	chr1	+	8486661	8487067	True	NM_001042682,NM_001080397	chr1,chr1	-,+	RERE,SLC45A1	-2914,-102322
chr2:213402784-213403056	chr2	+	213402860	213403030	True	NM_001042599,NM_005235,NM_001025436	chr2,chr2,chr2	-,-,+	ERBB4,ERBB4,SPAG16	377,377,746085
chrX:47231097-47232186	chrX	+	47231310	47231706	True	NM_003446,NM_007130	chrX,chrX	+,-	ZNF157,ZNF41	-1372,110689
chr14:65746144-65746424	chr14	+	65746152	65746360	True	NM_178155,NR_024334	chr14,chr14	+,-	FUT8,LOC645431	131479,133025
chr7:134678271-134678895	chr7	+	134678295	134678865	True	NM_178563,NM_024033	chr7,chr7	+,-	AGBL3,C7orf49	-7087,176717
chr12:104848101-104849440	chr12	+	104848252	104849455	True	NM_006166,NM_001173982,NM_018413	chr12,chr12,chr12	-,+,+	NFYB,CHST11,CHST11	-316212,1236,1236
chr2:231578653-231578970	chr2	+	231578653	231578987	True	NM_001130850,NM_005683,NM_001130849,NM_016289	chr2,chr2,chr2,chr2	+,-,+,+	CAB39,GPR55,CAB39,CAB39	-441,211004,-441,-1147
chr18:3011510-3011895	chr18	+	3011692	3011792	True	NM_014646,NM_032048	chr18,chr18	-,+	LPIN2,EMILIN2	203,-164722
chr4:99179746-99180200	chr4	+	99179746	99180135	True	NM_021159,NM_174952,NM_001100428,NM_001100429,NM_001100430,NM_001100426,NM_001100427	chr4,chr4,chr4,chr4,chr4,chr4,chr4	+,-,+,+,+,+,+	RAP1GDS1,C4orf37,RAP1GDS1,RAP1GDS1,RAP1GDS1,RAP1GDS1,RAP1GDS1	2391,-115355,2391,2391,2391,2391,2391
chr15:64677746-64678738	chr15	+	64677859	64678503	True	NM_001029989,NM_016213,NM_014736	chr15,chr15,chr15	-,+,-	KIAA0101,TRIP4,KIAA0101	-4157,1499,-4157
chr14:23340649-23340866	chr14	+	23340669	23340853	True	NM_001077351,NM_014045	chr14,chr14	-,+	RBM23,LRP10	47593,106
chr19:4124284-4125022	chr19	+	4124703	4125053	True	NM_030662,NM_032607	chr19,chr19	-,+	MAP2K2,CREB3L3	-577,28575
chr21:38376915-38377385	chr21	+	38377030	38377121	True	NM_000411,NM_018962	chr21,chr21	-,+	HLCS,DSCR6	-14494,1741
chr9:136026404-136026968	chr9	+	136026409	136026981	True	NR_001275,NM_001042368	chr9,chr9	+,-	CELP,RALGDS	-68534,-1821
chr14:105531853-105532206	chr14	+	105531861	105532179	True	NM_174891,NM_013345	chr14,chr14	+,-	C14orf79,GPR132	-79296,-107
chr4:3252158-3252369	chr4	+	3252183	3252275	True	NM_001042690,NM_002337	chr4,chr4	+,-	C4orf44,LRPAP1	-1467,281999
chr14:75641665-75642280	chr14	+	75641917	75642198	True	NM_006827,NM_005252	chr14,chr14	-,+	TMED10,FOS	1208,103282
chr10:1575213-1576422	chr10	+	1575262	1576329	True	NR_033387,NM_018702	chr10,chr10	+,-	NCRNA00168,ADARB2	-6488,203445
chr6:135806302-135807947	chr6	+	135806561	135807510	True	NM_001134830,NR_026805	chr6,chr6	-,+	AHI1,NCRNA00271	11446,11428
chr16:28563121-28564756	chr16	+	28563230	28564588	True	NM_138414,NM_012385	chr16,chr16	+,-	CCDC101,NUPR1	660,-12735
chr19:4833811-4834594	chr19	+	4833822	4834554	True	NM_182919,NM_018708	chr19,chr19	-,+	TICAM1,FEM1A	-2085,-42145
chr6:153314010-153315614	chr6	+	153314274	153315594	True	NM_001114184,NM_194435,NM_019041,NM_001142522	chr6,chr6,chr6,chr6	-,+,-,-	MTRF1L,VIP,MTRF1L,FBXO5	8389,-242396,8389,-9534
chr18:33878521-33880267	chr18	+	33878806	33879892	True	NM_001099406,NM_025135	chr18,chr18	-,+	SLC39A6,FHOD3	-169449,-1158
chr14:102413708-102414120	chr14	+	102413867	102414109	True	NM_001376,NM_005348	chr14,chr14	+,-	DYNC1H1,HSP90AA1	16755,139461
chr3:12044722-12045892	chr3	+	12044737	12045511	True	NM_003256,NM_133625,NM_003178	chr3,chr3,chr3	-,+,+	TIMP4,SYN2,SYN2	155390,350,350
chr6:111371324-111372351	chr6	+	111371420	111372235	True	NM_018593,NR_002932	chr6,chr6	+,-	SLC16A10,GSTM2P1	36545,-2663
chr6:124155390-124156976	chr6	+	124155730	124156931	True	NM_153355,NM_006073	chr6,chr6	+,-	NKAIN2,TRDN	-30722,-197788
chr22:42199694-42199991	chr22	+	42199801	42199873	True	NM_001003796,NM_024821	chr22,chr22	-,+	NHP2L1,CCDC134	-114888,-3184
chr10:70171007-70171757	chr10	+	70171006	70171639	True	NM_001042417,NM_021644,NM_017987	chr10,chr10,chr10	-,+,-	RUFY2,HNRNPH3,RUFY2	-3955,-79295,-4060
chr4:57973920-57975006	chr4	+	57973959	57975057	True	NR_034081,NM_001553	chr4,chr4	+,-	LOC255130,IGFBP7	870,1537
chr2:160757508-160757980	chr2	+	160757666	160758022	True	NM_001198760,NM_002349,NM_001198759,NM_022826	chr2,chr2,chr2,chr2	-,-,-,+	LY75-CD302,LY75,LY75-CD302,MARCH7	3295,3295,3295,-188707
chr2:27301534-27301794	chr2	+	27301533	27301739	True	NM_007046,NM_001134693,NM_000221,NM_006488	chr2,chr2,chr2,chr2	+,-,+,+	EMILIN1,OST4,KHK,KHK	-149,-6966,7871,7871
chr5:81033529-81034838	chr5	+	81033715	81034675	True	NM_001131028,NM_012446	chr5,chr5	+,-	ATG10,SSBP2	233168,12459
chr7:28220841-28221665	chr7	+	28221020	28221678	True	NR_034097,NM_175061	chr7,chr7	+,-	LOC100128081,JAZF1	-995,-583
chr12:125350592-125350825	chr12	+	125350750	125350864	True	NM_005505,NM_080626,NM_001082959	chr12,chr12,chr12	-,+,-	SCARB1,BRI3BP,SCARB1	-2231,127329,-2231
chr14:73447749-73449009	chr14	+	73447831	73449055	True	NM_178441,NM_181341	chr14,chr14	-,+	ZFYVE1,DCAF4	4659,-54843
chr19:15573483-15573987	chr19	+	15573775	15573851	True	NM_022904,NR_031716	chr19,chr19	-,+	RASAL3,MIR1470	1585,-13467
chr9:1049116-1050148	chr9	+	1049232	1050055	True	NM_006557,NM_001130865,NM_152569,NM_181872	chr9,chr9,chr9,chr9	+,+,-,+	DMRT2,DMRT2,C9orf66,DMRT2	290,298,-833339,564
chr19:13030852-13031259	chr19	+	13031162	13031226	True	NM_001105578,NM_004343	chr19,chr19	-,+	SYCE2,CALR	-1076,18187
chrY:2709625-2709891	chrY	+	2709657	2709925	True	NM_003140,NM_001008	chrY,chrY	-,+	SRY,RPS4Y1	-53865,-85
chr3:145879652-145880655	chr3	+	145879659	145880616	True	NM_182943,NM_000935,NM_003412	chr3,chr3,chr3	-,-,+	PLOD2,PLOD2,ZIC1	-377,-377,1246564
chr19:46001397-46002009	chr19	+	46001440	46001668	True	NM_003370,NM_005619,NM_206900,NM_001080401,NM_206901	chr19,chr19,chr19,chr19,chr19	+,-,-,+,-	VASP,RTN2,RTN2,PPM1N,RTN2	9019,-1129,-1127,62,-4966
chr3:141494983-141495312	chr3	+	141495185	141495317	True	NM_001178140,NM_139209	chr3,chr3	-,+	TFDP2,GRK7	223962,1725
chr17:30717466-30717835	chr17	+	30717647	30717717	True	NM_003457,NM_022344	chr17,chr17	+,-	ZNF207,C17orf75	-40549,-48458
chr20:62523589-62524586	chr20	+	62523793	62524333	True	NM_025219,NR_031735	chr20,chr20	+,-	DNAJC5,MIR1914	2121,48614
chr3:3085290-3086681	chr3	+	3085328	3086262	True	NM_000564,NM_182916	chr3,chr3	-,+	IL5RA,TRNT1	65846,82337
chr11:18605367-18606270	chr11	+	18605502	18606027	True	NM_153347,NM_001040697,NM_018314	chr11,chr11,chr11	+,-,-	TMEM86A,UEVLD,UEVLD	114323,4305,4305
chr19:15945406-15946398	chr19	+	15945530	15946413	True	NM_013940,NR_015379	chr19,chr19	-,+	OR10H1,UCA1	-26594,-5824
chr19:12435029-12435251	chr19	+	12435088	12435159	True	NM_003437,NM_145276	chr19,chr19	+,-	ZNF136,ZNF563	-161267,9428
chr11:61350029-61350671	chr11	+	61350063	61350361	True	NM_004200,NR_002775	chr11,chr11	-,+	SYT7,RPLP0P2	-1765,32146
chr4:76862738-76863185	chr4	+	76862875	76863154	True	NM_014435,NM_001042402,NM_001130017	chr4,chr4,chr4	-,-,+	NAAA,NAAA,ART3	-709,-709,69182
chr17:6876264-6878070	chr17	+	6876833	6877767	True	NM_000697,NR_029712	chr17,chr17	+,-	ALOX12,MIR195	21616,43311
chr1:66999707-67000639	chr1	+	66999892	67000610	True	NM_005478,NM_032291	chr1,chr1	-,+	INSL5,SGIP1	266384,-118
chr1:54621246-54623188	chr1	+	54621346	54623100	True	NM_201546,NM_016491	chr1,chr1	-,+	CDCP2,MRPL37	-1903,42739
chr8:42550760-42551388	chr8	+	42550789	42551229	True	NM_001199279,NM_000749	chr8,chr8	-,+	CHRNA6,CHRNB3	72750,1332
chr10:42965634-42965945	chr10	+	42965655	42965825	True	NR_026777,NR_026827	chr10,chr10	-,+	ZNF37BP,LOC84856	82507,5113
chr14:45722732-45723423	chr14	+	45722781	45723465	True	NM_018353,NM_020937	chr14,chr14	-,+	MIS18BP1,FANCM	-176,-117696
chr2:27993601-27994387	chr2	+	27993815	27994384	True	NM_014860,NM_004891,NM_145330	chr2,chr2,chr2	-,+,+	SUPT7L,MRPL33,MRPL33	-107366,199,199
chr19:51143640-51144527	chr19	+	51143640	51144203	True	NM_032298,NM_001195076,NM_001160329,NM_001160328	chr19,chr19,chr19,chr19	-,+,-,-	SYT3,LOC342918,SYT3,SYT3	-2338,8498,-548,-548
chr10:133918935-133920546	chr10	+	133919436	133920376	True	NM_001105521,NM_004052	chr10,chr10	+,-	JAKMIP3,BNIP3	-1181,-124001
chr17:40332188-40332532	chr17	+	40332291	40332483	True	NM_001524,NM_033194,NM_012285	chr17,chr17,chr17	-,+,-	HCRT,HSPB9,KCNH4	5037,-57586,863
chrX:12992488-12992730	chrX	+	12992487	12992708	True	NM_183049,NM_021109,NR_030727	chrX,chrX,chrX	+,+,-	TMSL3,TMSB4X,LOC349408	516,517,-31068
chr19:51072467-51072906	chr19	+	51072492	51072850	True	NR_004384,NM_001080457	chr19,chr19	+,-	SNAR-F,LRRC4B	35369,-1190
chr9:130499497-130500046	chr9	+	130499579	130499842	True	NM_130459,NM_144965,NM_001085347,NM_001134430,NM_001134431	chr9,chr9,chr9,chr9,chr9	-,+,-,-,-	TOR2A,TTC16,TOR2A,TOR2A,TOR2A	-1975,-21272,-1975,-1975,-1975
chr20:61735301-61735824	chr20	+	61735356	61735840	True	NR_003245,NR_003244	chr20,chr20	-,+	HAR1B,HAR1A	-1685,-2763
chr20:20692317-20692746	chr20	+	20692389	20692721	True	NM_020343,NM_002196	chr20,chr20	-,+	RALGAPA2,INSM1	595,-343679
chr10:98334667-98335949	chr10	+	98334900	98335977	True	NM_020123,NM_001170765	chr10,chr10	-,+	TM9SF3,LCOR	10882,256039
chr16:85645880-85646467	chr16	+	85645940	85646503	True	NM_001134473,NM_014615,NM_016095	chr16,chr16,chr16	+,+,-	KIAA0182,KIAA0182,GINS2	-962,420,76135
chr9:95058398-95059286	chr9	+	95058569	95059334	True	NR_003704,NM_013417,NR_037424,NM_002161,NM_001012267	chr9,chr9,chr9,chr9,chr9	-,-,-,-,+	SNORA84,IARS,MIR3651,IARS,CENPP	-3694,-2597,-3740,-2531,28406
chr14:75540704-75541163	chr14	+	75540900	75541072	True	NM_001042430,NM_203488,NM_024643	chr14,chr14,chr14	+,-,+	FAM164C,ACYP1,FAM164C	-4654,-10164,-4654
chr17:79652013-79652228	chr17	+	79652061	79652251	True	NM_001040025,NM_004712	chr17,chr17	-,+	ARL16,HGS	-1107,-1150
chrX:7810851-7811274	chrX	+	7810858	7811252	True	NM_013452,NM_004650	chrX,chrX	+,-	VCX,PNPLA4	-606,84273
chrX:7810851-7811274	chrX	-	8139021	8139071	False	NR_030380,NM_016378	chrX,chrX	+,-	MIR651,VCX2	-44066,287
chrX:7810851-7811274	chrX	+	8433107	8433157	False	NM_001001888,NM_000216	chrX,chrX	+,-	VCX3B,KAL1	-287,267120
chr4:83720207-83721595	chr4	+	83720394	83721641	True	NM_024672,NM_001037582,NM_024906	chr4,chr4,chr4	+,-,-	THAP9,SCD5,SCD5	100195,-384,-384
chr14:104182834-104183507	chr14	+	104182935	104183533	True	NM_024071,NM_005432,NM_001198953,NM_001100118,NM_001100119	chr14,chr14,chr14,chr14,chr14	+,-,+,-,-	ZFYVE21,XRCC3,ZFYVE21,XRCC3,XRCC3	-905,-1112,-905,-1112,-1112
chr6:129250302-129251207	chr6	+	129250381	129251031	True	NM_001135648,NM_001079823	chr6,chr6	-,+	PTPRK,LAMA2	-408511,-46146
chr3:67696740-67697161	chr3	+	67697106	67697210	True	NM_001177599,NM_003848,NM_213609	chr3,chr3,chr3	-,-,+	SUCLG2,SUCLG2,FAM19A1	7878,7878,356243
chr16:523847-524312	chr16	+	523908	524300	True	NR_024121,NM_001142272	chr16,chr16	-,+	NCRNA00235,RAB11FIP3	53157,549
chr2:217362647-217363257	chr2	+	217362704	217363122	True	NM_000998,NM_020814	chr2,chr2	+,-	RPL37A,MARCH4	397,-125954
chr7:73869084-73869579	chr7	+	73869148	73869476	True	NM_016328,NM_001199207,NM_005685,NM_181471	chr7,chr7,chr7,chr7	+,+,+,-	GTF2IRD1,GTF2IRD1,GTF2IRD1,RFC2	-1079,-1079,-1079,-200410
chr9:138532259-138533205	chr9	+	138532669	138533133	True	NM_001001676,NM_182974	chr9,chr9	+,-	LCN9,GLT6D1	22034,-1283
chr18:10455401-10456015	chr18	+	10455430	10455964	True	NM_153000,NM_022068	chr18,chr18	+,-	APCDD1,FAM38B	-856,692847
chr7:5601801-5602165	chr7	+	5601843	5602085	True	NM_001101,NM_003088	chr7,chr7	-,+	ACTB,FSCN1	-31611,30368
chr11:66791937-66792978	chr11	+	66792216	66792844	True	NM_177963,NM_001040716,NM_001177880	chr11,chr11,chr11	+,-,+	SYT12,PC,SYT12	-1451,-66369,-2077
chr1:108178467-108180099	chr1	+	108178467	108179922	True	NM_001079874,NM_014917	chr1,chr1	-,+	VAV3,NTNG1	51261,-495773
chr20:35485642-35486410	chr20	+	35485718	35486304	True	NM_080628,NM_080627,NM_199181	chr20,chr20,chr20	+,-,-	C20orf118,KIAA0889,KIAA0889	18265,5833,2022
chr3:50339943-50340297	chr3	+	50339946	50340312	True	NM_001200016,NM_001200029,NM_153281,NM_003549,NM_153282,NM_153283,NM_033159,NM_012191,NM_001200018,NM_153285,NM_007312,NM_001200030,NM_153215,NM_001200031,NM_006764,NM_001200032	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,-,-,-,-,-,-,-,-,+,-,-,-	NAT6,HYAL3,HYAL1,HYAL3,HYAL1,HYAL1,HYAL1,NAT6,NAT6,HYAL1,HYAL1,HYAL3,C3orf45,HYAL3,IFRD2,HYAL3	-3094,-3653,9550,-3047,742,742,742,-3094,-3626,742,742,-3047,-23479,-3047,-9920,-3047
chr11:118954871-118955320	chr11	+	118954980	118955069	True	NM_000190,NM_001024382,NM_002105	chr11,chr11,chr11	+,+,-	HMBS,HMBS,H2AFX	517,3627,11159
chr11:692947-694724	chr11	+	693041	694451	True	NM_174940,NM_001042463,NM_021008	chr11,chr11,chr11	+,+,-	TMEM80,TMEM80,DEAF1	1164,1164,1339
chr10:85898840-85899165	chr10	+	85898839	85899127	True	NM_001017924,NM_014394	chr10,chr10	-,+	LRIT2,GHITM	86207,57
chr7:57208397-57209743	chr7	+	57208510	57209790	True	NM_033273,NR_036102	chr7,chr7	-,+	ZNF479,MIR3147	-939,262940
chr1:220700852-220701255	chr1	+	220700957	220701287	True	NM_012414,NM_018650	chr1,chr1	-,+	RAB3GAP2,MARK1	-255114,280
chr16:87427063-87427437	chr16	+	87427062	87427339	True	NM_022818,NM_024735,NR_024568	chr16,chr16,chr16	+,-,-	MAP1LC3B,FBXO31,FBXO31	-1319,-9668,-1354
chr6:14118203-14118910	chr6	+	14118261	14118935	True	NM_001031713,NM_001040280,NM_004233	chr6,chr6,chr6	-,+,+	CCDC90A,CD83,CD83	-303472,-447,-447
chr10:30994403-30994682	chr10	+	30994427	30994633	True	NM_183058,NM_005204	chr10,chr10	-,+	LYZL2,MAP3K8	-75780,-271612
chr20:1518313-1518852	chr20	+	1518377	1518885	True	NM_014723,NM_178460	chr20,chr20	+,-	SNPH,SIRPD	-271468,19508
chr6:15245828-15246142	chr6	+	15245909	15246137	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	389,417202
chr3:122277306-122278478	chr3	+	122277344	122278468	True	NM_031458,NM_001146105,NM_001146106,NM_138287,NM_001146104,NM_001146103,NM_001146102	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,+,-,-,-	PARP9,PARP9,PARP9,DTX3L,PARP9,PARP9,PARP9	5119,4743,4790,4716,4790,5119,4743
chr11:68050951-68051285	chr11	+	68051281	68051333	True	NM_022338,NM_002335	chr11,chr11	-,+	C11orf24,LRP5	-11812,28774
chr5:134094723-134095568	chr5	+	134094950	134095590	True	NM_014829,NM_016103	chr5,chr5	+,-	DDX46,SAR1B	-540,-126417
chr20:60878820-60879071	chr20	+	60878819	60879051	True	NM_007002,NM_175573,NM_005560	chr20,chr20,chr20	+,+,-	ADRM1,ADRM1,LAMA5	-843,-843,63367
chr19:3772749-3774120	chr19	+	3773117	3774074	True	NM_032753,NM_172251	chr19,chr19	-,+	RAX2,MRPL54	-898,-10503
chr17:6945403-6945618	chr17	+	6945429	6945635	True	NM_201566,NM_153357	chr17,chr17	+,-	SLC16A13,SLC16A11	-6086,1657
chr4:165896239-165897379	chr4	+	165896495	165897041	True	NM_153027,NM_001012414	chr4,chr4	+,-	C4orf39,TRIM61	-18448,1827
chr11:66336007-66336320	chr11	+	66336065	66336259	True	NM_003793,NM_001104	chr11,chr11	-,+	CTSF,ACTN3	-18,-21725
chr6:26055781-26056172	chr6	+	26055852	26056220	True	NM_005319,NM_003531	chr6,chr6	-,+	HIST1H1C,HIST1H3C	529,-10264
chr15:89878017-89878715	chr15	+	89878251	89878678	True	NM_001126131,NR_029692,NM_002693	chr15,chr15,chr15	-,+,-	POLG,MIR9-3,POLG	-225,32569,-225
chr19:4908017-4908431	chr19	+	4908093	4908389	True	NM_001080523,NM_001048201,NM_013282	chr19,chr19,chr19	-,+,+	ARRDC5,UHRF1,UHRF1	-5214,1120,2176
chr11:118232028-118233132	chr11	+	118232093	118233182	True	NM_004788,NM_001040651,NM_001204077	chr11,chr11,chr11	+,-,+	UBE4A,CD3D,UBE4A	-1851,-18634,-1851
chrX:134053478-134055318	chrX	+	134053717	134055072	True	NM_019556,NM_001163438	chrX,chrX	-,+	MOSPD1,LOC644538	-4420,69895
chr11:108466844-108467650	chr11	+	108466928	108467694	True	NM_015065,NM_004398	chr11,chr11	-,+	EXPH5,DDX10	-2554,68121
chr16:53502239-53503348	chr16	+	53502400	53503388	True	NM_001012398,NM_005611	chr16,chr16	-,+	AKTIP,RBL2	33832,-34103
chr17:7082353-7082660	chr17	+	7082382	7082572	True	NM_001671,NM_000018,NM_001197216	chr17,chr17,chr17	-,+,-	ASGR1,ACADVL,ASGR1	361,40580,361
chr1:179533149-179533912	chr1	+	179533238	179533849	True	NM_001199091,NM_014625	chr1,chr1	+,-	TDRD5,NPHS2	26898,11286
chr7:56674678-56676087	chr7	+	56674843	56676026	True	NR_029420,NR_026929	chr7,chr7	-,+	LOC650226,DKFZp434L192	-158775,-110986
chr16:121338-121555	chr16	+	121501	121593	True	NM_022450,NM_001015052,NM_002434,NM_001015054	chr16,chr16,chr16,chr16	-,+,+,+	RHBDF1,MPG,MPG,MPG	1086,6575,6575,5424
chr1:224613853-224614518	chr1	+	224613886	224614311	True	NM_001115113,NM_014184,NM_025160	chr1,chr1,chr1	-,+,-	WDR26,CNIH4,WDR26	7749,-69352,7749
chr1:1448007-1448842	chr1	+	1448235	1448719	True	NM_001170536,NM_001170535,NM_018188,NM_001114748	chr1,chr1,chr1,chr1	+,+,+,-	ATAD3A,ATAD3A,ATAD3A,C1orf70	-376,-763,-763,27071
chr1:1448007-1448842	chr1	+	1410320	1410370	False	NR_026871,NM_031921	chr1,chr1	-,+	LOC441869,ATAD3B	-53670,-3207
chr1:1448007-1448842	chr1	+	1407851	1407973	False	NR_026871,NM_031921	chr1,chr1	-,+	LOC441869,ATAD3B	-51201,-738
chr1:235527198-235527512	chr1	+	235527253	235527347	True	NM_001079515,NM_031371,NM_003193	chr1,chr1,chr1	+,-,+	TBCE,ARID4B,TBCE	3380,-35721,3380
chrX:27826929-27827217	chrX	+	27826984	27827052	True	NM_182506,NM_001017930	chrX,chrX	+,-	MAGEB10,DCAF8L1	-928,172564
chrX:48978756-48979047	chrX	+	48978847	48978927	True	NM_001099681,NM_015698	chrX,chrX	+,-	MAGIX,GPKOW	40253,1202
chr11:57416956-57418802	chr11	+	57417380	57418778	True	NM_001142597,NM_006831,NM_145008,NR_029673	chr11,chr11,chr11,chr11	+,+,-,+	CLP1,CLP1,YPEL4,MIR130A	6437,6437,37,-8760
chr12:56730173-56731304	chr12	+	56730423	56730981	True	NM_001127460,NM_016584,NM_001166279,NM_014871	chr12,chr12,chr12,chr12	-,+,-,-	PAN2,IL23A,PAN2,PAN2	-2890,1681,-2586,-2586
chr19:3524325-3524658	chr19	+	3524427	3524591	True	NM_001136197,NM_001145165,NM_001136198	chr19,chr19,chr19	+,-,+	FZR1,DOHH,FZR1	-1524,-23489,-1524
chr4:40752372-40752792	chr4	+	40752506	40752780	True	NM_001166051,NM_024677	chr4,chr4	-,+	APBB2,NSUN7	106442,-643
chr11:47446460-47447364	chr11	+	47446660	47447218	True	NM_002804,NM_152264	chr11,chr11	-,+	PSMC3,SLC39A13	856,-16665
chr11:805674-805953	chr11	+	805698	805838	True	NM_145887,NM_145886,NM_024698,NM_001191060,NM_001191061,NM_001004,NR_002585	chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,-,+,+	LRDD,LRDD,SLC25A22,SLC25A22,SLC25A22,RPLP2,SNORA52	-448,-448,-9435,-7703,-7429,4097,5842
chr7:17979443-17979710	chr7	+	17979515	17979603	True	NM_001204144,NM_015132	chr7,chr7	+,-	HDAC9,SNX13	146968,578
chr12:6873681-6874011	chr12	+	6873860	6874034	True	NM_002286,NR_026581,NM_002824	chr12,chr12,chr12	+,-,+	LAG3,MLF2,PTMS	7635,-11224,1506
chr15:72487322-72488115	chr15	+	72487321	72487951	True	NM_001012642,NM_145204	chr15,chr15	-,+	GRAMD2,SENP8	2235,-76743
chr3:141455975-141456192	chr3	+	141455990	141456236	True	NM_001201370,NM_183237,NR_037703,NR_037702,NM_001178140,NM_014245	chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,-,+	RNF7,RNF7,RNF7,RNF7,TFDP2,RNF7	814,814,814,814,263043,814
chr5:59127173-59128772	chr5	+	59127317	59128619	True	NR_024617,NM_001104631	chr5,chr5	+,-	PART1,PDE4D	654920,61060
chr13:32319741-32321728	chr13	+	32319751	32321743	True	NM_130806,NM_001166058,NM_001136571	chr13,chr13,chr13	+,+,-	RXFP2,RXFP2,ZAR1L	-6123,-6123,564404
chr11:43331734-43333197	chr11	+	43331737	43333246	True	NR_024625,NR_033868,NM_006595,NM_001142930,NM_001142931	chr11,chr11,chr11,chr11,chr11	+,-,+,+,+	API5,LOC399881,API5,API5,API5	258,-40818,258,258,258
chr17:79820457-79821171	chr17	+	79820705	79821209	True	NM_000918,NM_001002244,NM_004309,NM_001185078,NM_001185077	chr17,chr17,chr17,chr17,chr17	-,+,-,-,-	P4HB,ANAPC11,ARHGDIA,ARHGDIA,ARHGDIA	-2161,28389,8123,8123,7631
chr14:51559068-51560043	chr14	+	51559140	51559948	True	NM_052978,NM_015163,NM_030755	chr14,chr14,chr14	-,-,+	TRIM9,TRIM9,TMX1	2524,2524,146937
chr2:99797815-99798738	chr2	+	99798015	99798706	True	NM_145212,NR_028356,NM_138798	chr2,chr2,chr2	+,+,-	MRPL30,MRPL30,MITD1	-530,-530,-523
chr8:145151542-145151813	chr8	+	145151612	145151828	True	NM_001916,NM_030974,NM_032272	chr8,chr8,chr8	+,-,+	CYC1,SHARPIN,MAF1	-1703,7362,7476
chr3:39166005-39166602	chr3	+	39166253	39166588	True	NM_031899,NM_145755	chr3,chr3	-,+	GORASP1,TTC21A	-17123,-17160
chr10:71332342-71332589	chr10	+	71332346	71332572	True	NM_145306,NM_020999	chr10,chr10	+,-	C10orf35,NEUROG3	57430,688
chr3:57260954-57261520	chr3	+	57261112	57261434	True	NM_012096,NM_003865	chr3,chr3	+,-	APPL1,HESX1	330,-26832
chr5:745509-746115	chr5	+	745682	746110	True	NM_018140,NM_007030	chr5,chr5	+,-	CEP72,TPPP	-133328,-52172
chr5:745509-746115	chr5	+	837865	837915	False	NM_001166260,NM_024786	chr5,chr5	+,-	TRIP13,ZDHHC11	55053,13236
chr19:14118698-14119124	chr19	+	14118722	14118954	True	NM_002918,NM_080864	chr19,chr19	-,+	RFX1,RLN3	-1588,20062
chr16:88752316-88752531	chr16	+	88752366	88752536	True	NM_001012759,NM_178310	chr16,chr16	+,-	CTU2,SNAI3	20354,396
chr8:145515591-145515884	chr8	+	145515727	145515909	True	NM_005526,NM_015201	chr8,chr8	+,-	HSF1,BOP1	-508,-607
chr16:74732933-74734254	chr16	+	74733085	74734266	True	NM_152649,NM_032268,NM_001142497	chr16,chr16,chr16	-,+,-	MLKL,ZNRF1,MLKL	573,298648,573
chr19:41224311-41224779	chr19	+	41224476	41224568	True	NM_025194,NM_001142555,NM_024876	chr19,chr19,chr19	+,-,-	ITPKC,ADCK4,ADCK4	-1519,-3465,-1686
chr2:95524479-95526102	chr21	-	9924769	9924853	True	NM_001033515,NR_037458	chr21,chr21	-,+	LOC100132288,MIR3687	43816,-98651
chr2:95524479-95526102	chr2	+	95525001	95525609	False	NR_003366,NM_144705	chr2,chr2	-,+	ANKRD20A8P,TEKT4	-2181,11622
chr2:95524479-95526102	chr9	-	67924641	67924725	False	NR_027422,NM_001012419,NM_032250	chr9,chr9,chr9	-,+,+	FAM27B,ANKRD20A3,ANKRD20A1	-130452,2035,2035
chr2:95524479-95526102	chr9	+	44120599	44120683	False	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	-489869,-435799
chr2:95524479-95526102	chr9	-	42366246	42366330	False	NR_003670,NM_001012419,NM_001012421	chr9,chr9,chr9	-,+,+	KGFLP2,ANKRD20A3,ANKRD20A2	-346662,1972,1972
chr19:19304202-19304834	chr19	+	19304582	19304724	True	NM_176880,NM_001145784,NM_005919,NM_003721,NM_001145783,NM_134440,NR_027307,NR_027308	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,+,-,+,-,-	NR2C2AP,LOC729991,LOC729991-MEF2B,RFXANK,LOC729991,RFXANK,LOC729991-MEF2B,LOC729991-MEF2B	9576,-1182,-1182,-1625,-1182,-1625,-1182,-1182
chr2:193059748-193059961	chr2	+	193059863	193059939	True	NM_001031716,NM_016192	chr2,chr2	+,-	OBFC2A,TMEFF2	-517053,-219
chr11:125366638-125367602	chr11	+	125366692	125367530	True	NM_005103,NM_001007277,NM_022549	chr11,chr11,chr11	-,+,-	FEZ1,EI24,FEZ1	-486,71767,-486
chr11:6479018-6479264	chr11	+	6479065	6479127	True	NM_012192,NM_006458	chr11,chr11	+,-	FXC1,TRIM3	23549,16128
chr16:67679554-67680337	chr16	+	67679573	67680231	True	NM_001013838,NM_001082486	chr16,chr16	+,-	RLTPR,ACD	-594,14537
chr8:142011858-142012160	chr8	+	142011943	142012209	True	NM_153831,NM_005607,NM_014957,NM_001199649	chr8,chr8,chr8,chr8	-,-,+,-	PTK2,PTK2,DENND3,PTK2	-531,-531,126510,-531
chr1:242689828-242690591	chr1	+	242690166	242690419	True	NM_006027,NM_152666	chr1,chr1	+,-	EXO1,PLD5	-678195,-2168
chr2:230569380-230570986	chr2	+	230569410	230570953	True	NM_174899,NM_139072	chr2,chr2	+,-	FBXO36,DNER	216253,8387
chr5:43482103-43483518	chr5	+	43482363	43483440	True	NM_022483,NM_012343	chr5,chr5	-,+	C5orf28,NNT	609,119350
chr2:3621263-3621751	chr2	+	3621557	3621785	True	NM_001011,NM_002936	chr2,chr2	+,-	RPS7,RNASEH1	1067,-15617
chr3:119263544-119263996	chr3	+	119263605	119263838	True	NM_005191,NM_001125	chr3,chr3	-,+	CD80,ADPRH	14694,34684
chr8:90596876-90597755	chr8	+	90597284	90597584	True	NM_002485,NM_003821	chr8,chr8	-,+	NBN,RIPK2	399365,172390
chr17:38171186-38171695	chr17	+	38171378	38171624	True	NM_001079518,NM_000759,NR_033662,NM_172220,NM_172219,NM_001178147	chr17,chr17,chr17,chr17,chr17,chr17	-,+,+,+,+,+	MED24,CSF3,CSF3,CSF3,CSF3,CSF3	39317,4,4,4,4,4
chr3:14718850-14719098	chr3	+	14718850	14719000	True	NM_001184957,NM_001080423,NM_001184958,NM_032137	chr3,chr3,chr3,chr3	+,-,+,+	C3orf20,GRIP2,C3orf20,C3orf20	-2295,-135262,-2295,-2295
chr4:152116378-152117111	chr4	+	152116578	152117068	True	NM_183375,NM_001128924	chr4,chr4	+,-	PRSS48,SH3D19	81256,-19874
chr5:61609473-61610396	chr5	+	61609485	61610423	True	NM_004520,NM_014473,NM_001098511	chr5,chr5,chr5	+,-,+	KIF2A,DIMT1L,KIF2A	-7555,89355,-7555
chr2:19558792-19559381	chr2	+	19558812	19559306	True	NM_145260,NR_033875	chr2,chr2	-,+	OSR1,FLJ12334	-440,509308
chr9:116108908-116109437	chr9	+	116108912	116109065	True	NM_001012361,NM_145241,NM_017688	chr9,chr9,chr9	-,-,+	WDR31,WDR31,BSPRY	-6292,-6292,2746
chr2:169099635-169100010	chr2	+	169099656	169100041	True	NM_203463,NM_013233	chr2,chr2	+,-	LASS6,STK39	212793,4115
chr10:5859252-5859906	chr10	+	5859301	5859822	True	NM_001115156,NM_001494,NM_178150	chr10,chr10,chr10	-,-,+	GDI2,GDI2,FBXO18	-3789,-3789,72391
chr3:42745972-42747512	chr3	+	42745978	42747062	True	NM_152393,NM_020707,NR_027753	chr3,chr3,chr3	+,-,-	KBTBD5,HHATL,HHATL	-19018,-1659,-2965
chr11:125036034-125036309	chr11	+	125036072	125036352	True	NM_001080546,NM_022062	chr11,chr11	-,+	TMEM218,PKNOX2	-62867,-1564
chr15:75202035-75203658	chr15	+	75202083	75203282	True	NM_002435,NM_020447	chr15,chr15	+,-	MPI,C15orf17	-19724,-2621
chr7:27213642-27214144	chr7	+	27213857	27214107	True	NM_018951,NR_037940,NR_037939,NR_029911,NM_153715,NR_002795,NM_152739	chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,+,-	HOXA10,HOXA10-HOXA9,HOXA10,MIR196B,HOXA10,HOXA11-AS1,HOXA9	-34,5823,5823,-4675,5819,10919,-8708
chr22:50924966-50925199	chr22	+	50925078	50925248	True	NM_024866,NM_017584,NM_002972	chr22,chr22,chr22	+,+,-	ADM2,MIOX,SBF1	-5117,-16,-11614
chr4:49180376-49180664	chr4	+	49180522	49180596	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-192308,-271707
chr8:97656826-97657343	chr8	+	97656850	97657338	True	NM_016134,NM_015942	chr8,chr8	+,-	PGCP,MTERFD1	160,-383054
chr3:63809567-63810234	chr3	+	63809782	63810201	True	NR_026866,NM_025075	chr3,chr3	+,-	C3orf49,THOC7	-4799,39454
chr6:157738427-157738975	chr6	+	157738562	157739004	True	NM_018452,NM_024630	chr6,chr6	-,+	C6orf35,ZDHHC14	6299,63552
chr6:15022969-15023200	chr6	+	15023090	15023210	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	223316,640129
chr10:92981999-92983205	chr10	+	92982003	92983162	True	NR_002779,NM_032373	chr10,chr10	-,+	NUDT9P1,PCGF5	-69166,-1686
chr2:241526605-241527883	chr2	+	241526644	241527526	True	NM_017844,NM_023083,NM_023085	chr2,chr2,chr2	-,+,+	ANKMY1,CAPN10,CAPN10	-29239,-562,-562
chr14:24738741-24740325	chr14	+	24738779	24740183	True	NM_000359,NM_004581,NM_182836,NM_174913	chr14,chr14,chr14,chr14	-,-,-,+	TGM1,RABGGTA,RABGGTA,C14orf21	-6363,610,670,28914
chr22:35557236-35558337	chr22	+	35557551	35558375	True	NM_001008494,NM_005368,NM_001003681	chr22,chr22,chr22	+,-,+	ISX,MB,HMGXB4	-95472,455059,95069
chr3:52002521-52003537	chr3	+	52002898	52003362	True	NM_001174100,NR_027476,NM_033010,NM_001146314,NM_015407,NR_037192,NM_033008,NM_032750,NM_020418	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,+,+,-,-,-	PCBP4,ABHD14B,PCBP4,ABHD14B,ABHD14A,ABHD14A-ACY1,PCBP4,ABHD14B,PCBP4	-1416,5334,-5990,5334,5679,5679,-1416,5334,-1448
chr17:21028254-21028643	chr17	+	21028256	21028658	True	NM_015276,NM_015510	chr17,chr17	-,+	USP22,DHRS7B	-81904,1599
chr17:62050568-62050983	chr17	+	62050572	62050810	True	NM_001164257,NM_000334	chr17,chr17	+,-	C17orf72,SCN4A	24900,-294
chr2:74214639-74215670	chr2	+	74214704	74215600	True	NM_144993,NM_001035505	chr2,chr2	+,-	TET3,BOLA3	57849,159489
chr12:118452783-118453666	chr12	+	118452946	118453494	True	NM_018639,NM_181578,NM_007370,NM_001130113,NM_001130112	chr12,chr12,chr12,chr12,chr12	-,+,+,+,+	WSB2,RFC5,RFC5,RFC5,RFC5	45509,1013,1013,1013,1013
chrX:129269220-129269677	chrX	+	129269344	129269703	True	NM_001130846,NM_004794	chrX,chrX	-,+	AIFM1,RAB33A	2362,36069
chr10:27443353-27443589	chr10	+	27443370	27443430	True	NM_032844,NM_014263,NM_001172304,NM_001172303,NM_139312	chr10,chr10,chr10,chr10,chr10	+,-,+,+,-	MASTL,YME1L1,MASTL,MASTL,YME1L1	322,-49,322,322,-49
chr11:76477778-76478610	chr11	+	76477914	76478620	True	NM_015516,NR_024042	chr11,chr11	+,-	TSKU,GUCY2E	15664,-45081
chr11:71168665-71169373	chr11	+	71168893	71169323	True	NM_018161,NM_001360,NM_001163817	chr11,chr11,chr11	+,-,-	NADSYN1,DHCR7,DHCR7	-4738,-9416,-9416
chr18:11981383-11981607	chr18	+	11981464	11981626	True	NM_023075,NM_014214	chr18,chr18	-,+	MPPE1,IMPA2	-72823,-88
chr2:71045558-71046664	chr2	+	71045901	71046563	True	NM_173535,NM_012476	chr2,chr2	-,+	CLEC4F,VAX2	1219,81156
chr2:228236476-228237324	chr2	+	228236554	228237086	True	NM_020194,NM_024795	chr2,chr2	+,-	MFF,TM4SF20	-44397,6986
chr21:33095625-33096101	chr21	+	33095953	33096149	True	NM_020706,NM_000454,NM_001145445,NM_001145444	chr21,chr21,chr21,chr21	-,+,-,-	SCAF4,SOD1,SCAF4,SCAF4	8332,-64080,8332,8332
chr8:79628129-79628651	chr8	+	79628286	79628700	True	NM_016010,NM_000880	chr8,chr8	+,-	FAM164A,IL7	-50061,89108
chr20:50416890-50417183	chr20	+	50416980	50417076	True	NM_020436,NM_014484	chr20,chr20	-,+	SALL4,MOCS3	2022,-841676
chr3:55520836-55521085	chr3	+	55520906	55521100	True	NM_003392,NM_001012506	chr3,chr3	-,+	WNT5A,CCDC66	281,1070083
chr4:85598970-85600282	chr4	+	85599355	85600219	True	NM_001263,NM_006168	chr4,chr4	+,-	CDS1,NKX6-1	-95349,-179968
chr1:160991664-160992350	chr1	+	160991772	160992356	True	NR_033385,NM_016946	chr1,chr1	+,-	KLHDC9,F11R	75794,-639
chr17:42148305-42148569	chr17	+	42148336	42148560	True	NR_028581,NR_028582,NM_138387,NM_152344	chr17,chr17,chr17,chr17	+,+,+,-	G6PC3,G6PC3,G6PC3,LSM12	-289,-289,-289,-3349
chrX:51807282-51808222	chrX	+	51807351	51808016	True	NM_001098800,NM_177537,NM_177535,NM_030801,NR_003712,NR_003711	chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,+,-	MAGED4,MAGED4B,MAGED4B,MAGED4B,SNORA11E,SNORA11D	4314,4403,4403,4403,-959,-782
chrX:51807282-51808222	chrX	-	51932270	51932935	False	NM_001098800,NM_177537,NM_177535,NM_030801,NR_003712,NR_003711	chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,-,+	MAGED4,MAGED4B,MAGED4B,MAGED4B,SNORA11E,SNORA11D	-4314,-4403,-4403,-4403,959,782
chr8:66736579-66738559	chr8	+	66736895	66738601	True	NM_001145838,NM_002604	chr8,chr8	+,-	MTFR1,PDE7A	-154849,15204
chr12:92539396-92539736	chr12	+	92539501	92539755	True	NR_027932,NM_001731	chr12,chr12	+,-	CLLU1,BTG1	275551,-2
chr14:70248003-70248598	chr14	+	70248008	70248598	True	NR_029378,NM_006925	chr14,chr14	-,+	LOC100289511,SRSF5	-13578,-14225
chr7:11010171-11011856	chr7	+	11010230	11011902	True	NM_002489,NR_033435,NM_014660,NR_033436	chr7,chr7,chr7,chr7	-,+,+,+	NDUFA4,PHF14,PHF14,PHF14	-30417,1596,1596,1596
chr11:414841-415118	chr11	+	414959	415045	True	NM_001135053,NM_007183,NM_021805,NM_001135054	chr11,chr11,chr11,chr11	-,+,-,-	SIGIRR,PKP3,SIGIRR,SIGIRR	2402,-20794,2402,4
chr17:41741240-41741787	chr17	+	41741405	41741704	True	NM_001136483,NM_013999,NM_001040002,NM_004527	chr17,chr17,chr17,chr17	+,-,-,-	C17orf105,MEOX1,MEOX1,MEOX1	116098,-2474,-2143,-2474
chr2:65432405-65434057	chr10	+	76982093	76982143	False	NM_144589,NR_033675	chr10,chr10	-,+	COMTD1,VDAC2	13677,-11844
chr2:65432405-65434057	chr10	+	76978937	76979087	False	NM_001184783,NM_001184823,NM_144589,NM_003375,NR_033675	chr10,chr10,chr10,chr10,chr10	+,+,-,+,+	VDAC2,VDAC2,COMTD1,VDAC2,VDAC2	-8784,-9172,16829,-8784,-8784
chr2:65432405-65434057	chr2	+	65432509	65433505	True	NM_001005386,NM_015543	chr2,chr2	+,-	ACTR2,RAB1A	21323,-75074
chr4:88312558-88312796	chr4	+	88312559	88312681	True	NM_024047,NM_016245	chr4,chr4	+,-	NUDT9,HSD17B11	31053,-104
chrY:1661067-1661302	chrY	+	1661139	1661333	True	NM_005088,NR_027383,NM_004043,NM_178129	chrY,chrY,chrY,chrY	+,+,+,-	AKAP17A,AKAP17A,ASMT,P2RY8	-704,-704,3014,-55102
chrY:1661067-1661302	chrX	+	1711139	1711333	False	NM_005088,NR_027383,NM_004043,NM_178129	chrX,chrX,chrX,chrX	+,+,+,-	AKAP17A,AKAP17A,ASMT,P2RY8	-704,-704,3014,-55102
chr1:27715581-27717485	chr1	+	27715944	27717472	True	NM_005281,NM_207397	chr1,chr1	+,-	GPR3,CD164L2	1679,-6139
chr11:47926481-47927063	chr11	+	47926518	47927026	True	NM_015231,NM_001098503	chr11,chr11	-,+	NUP160,PTPRJ	-56461,75083
chr7:127230148-127230477	chr7	+	127230159	127230364	True	NM_024523,NM_020369,NM_001662	chr7,chr7,chr7	-,+,+	GCC1,FSCN3,ARF5	-4505,3324,-1804
chrX:48685722-48685983	chrX	+	48685877	48686023	True	NM_181532,NM_013271	chrX,chrX	+,-	ERAS,PCSK1N	1259,7987
chr3:15225553-15226774	chr3	+	15225816	15226740	True	NR_027927,NM_014296	chr3,chr3	-,+	COL6A4P1,CAPN7	20776,20992
chr5:54532644-54533529	chr5	+	54532680	54533304	True	NM_021147,NM_001190787,NM_015360	chr5,chr5,chr5	-,-,+	CCNO,LOC345643,SKIV2L2	-3172,-9537,70271
chr8:18643100-18643636	chr8	+	18643172	18643506	True	NM_000015,NM_206909	chr8,chr8	+,-	NAT2,PSD3	-394468,22949
chr21:30971251-30972604	chr21	+	30971379	30972634	True	NM_175611,NR_033368	chr21,chr21	-,+	GRIK1,NCRNA00258	339698,-3083
chr8:41167425-41167891	chr8	+	41167613	41167935	True	NM_001174124,NM_003012	chr8,chr8	+,-	GOLGA7,SFRP1	180145,-623
chr17:48846505-48847393	chr17	+	48846627	48847439	True	NR_024626,NM_016424	chr17,chr17	-,+	C17orf73,LUC7L3	-1709,-49753
chr15:57028220-57029385	chr15	+	57028438	57029339	True	NM_001002844,NM_017661,NM_001002843,NM_003205	chr15,chr15,chr15,chr15	-,-,-,+	ZNF280D,ZNF280D,ZNF280D,TCF12	-2651,-2651,-2651,181493
chr4:7197066-7198013	chr4	+	7197387	7197991	True	NM_020777,NR_027441	chr4,chr4	+,-	SORCS2,FLJ36777	-3065,-92284
chr17:35720215-35722004	chr17	+	35720522	35721924	True	NM_198836,NM_173625	chr17,chr17	-,+	ACACA,C17orf78	-4463,11060
chr19:9539996-9540949	chr19	+	9540062	9540968	True	NM_198058,NM_006631,NM_001172651	chr19,chr19,chr19	-,-,+	ZNF266,ZNF266,ZNF177	5316,5316,-53131
chr3:101407108-101407349	chr3	+	101407107	101407167	True	NR_024407,NM_000986	chr3,chr3	+,-	LOC100009676,RPL24	-11884,-1544
chr14:31675203-31676079	chr14	+	31675288	31675915	True	NM_015382,NM_001128126	chr14,chr14	-,+	HECTD1,AP4S1	824,-180659
chr12:57118541-57118906	chr12	+	57118667	57118819	True	NM_001113202,NM_001113203,NM_005594,NM_001113201,NM_003725	chr12,chr12,chr12,chr12,chr12	-,-,-,-,+	NACA,NACA,NACA,NACA,HSD17B6	557,557,297,297,38288
chr2:107141846-107142418	chr2	+	107141846	107142342	True	NM_001144013,NR_003506	chr2,chr2	-,+	RGPD3,PLGLA	-57045,-139138
chr19:40854557-40855585	chr19	+	40854802	40855190	True	NM_012268,NM_001031696,NM_178830	chr19,chr19,chr19	+,+,-	PLD3,PLD3,C19orf47	-521,-521,-509
chr10:38489903-38491436	chr10	+	38490310	38491436	True	NR_027269,NR_024524	chr10,chr10	-,+	SEPT7L,LOC100129055	200394,-25762
chr5:60627445-60627724	chr5	+	60627454	60627676	True	NM_001048249,NM_020928	chr5,chr5	-,+	C5orf43,ZSWIM6	-169152,423
chr11:117696454-117698055	chr11	+	117696462	117697948	True	NM_001680,NM_001558,NM_021603	chr11,chr11,chr11	-,+,-	FXYD2,IL10RA,FXYD2	-1003,159157,915
chr21:44557044-44558613	chr21	+	44557050	44558316	True	NM_006758,NM_000394	chr21,chr21	-,+	U2AF1,CRYAA	-29362,30824
chr6:35416649-35417554	chr6	+	35417383	35417583	True	NM_003214,NM_021922	chr6,chr6	-,+	TEAD3,FANCE	47328,2554
chr15:63336034-63336401	chr15	+	63336247	63336383	True	NM_001018020,NM_001018007,NM_001018004,NM_001018005,NM_001018008,NM_000366,NM_001018006,NM_015920	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,-	TPM1,TPM1,TPM1,TPM1,TPM1,TPM1,TPM1,RPS27L	-1460,-1460,-1460,-1460,4252,-1460,-1460,113408
chr12:132626259-132626893	chr12	+	132626363	132626803	True	NM_175066,NM_024078	chr12,chr12	-,+	DDX51,NOC4L	2127,2189
chr18:6399358-6400704	chr18	+	6399463	6400339	True	NM_173464,NM_001010000	chr18,chr18	-,+	L3MBTL4,ARHGAP28	14633,434092
chr2:97563964-97564401	chr2	+	97563969	97564441	True	NM_001172667,NM_199078,NM_016490	chr2,chr2,chr2	-,+,-	FAM178B,CNNM3,FAM178B	-3070,-82029,-99
chr2:85133443-85133674	chr2	+	85133495	85133653	True	NM_021103,NM_001080824	chr2,chr2	+,-	TMSB10,C2orf89	-783,-25243
chr2:75426041-75426365	chr2	+	75426041	75426316	True	NM_015727,NM_019896,NM_001058	chr2,chr2,chr2	-,+,-	TACR1,POLE4,TACR1	380,-240317,380
chr9:100396651-100397578	chr9	+	100396697	100397536	True	NM_139246,NM_002486	chr9,chr9	-,+	TSTD2,NCBP1	-735,-1043
chr15:69376053-69376536	chr15	+	69376106	69376574	True	NR_026949,NM_006305	chr15,chr15	+,-	NCRNA00277,ANP32A	-2967,-262845
chr16:20753213-20753699	chr16	+	20753278	20753706	True	NM_202000,NM_017736	chr16,chr16	+,-	ACSM3,THUMPD1	21605,-79
chr1:160093225-160094099	chr1	+	160093345	160093989	True	NM_052868,NM_000702	chr1,chr1	-,+	IGSF8,ATP1A2	-24937,-7878
chr1:32930098-32930335	chr1	+	32930134	32930344	True	NM_001145720,NM_018045	chr1,chr1	+,-	ZBTB8B,BSDC1	313,-70072
chr10:74855672-74855915	chr10	+	74855681	74855905	True	NM_001142595,NM_001017962,NM_001142596,NM_000917,NM_015901	chr10,chr10,chr10,chr10,chr10	-,-,-,-,+	P4HA1,P4HA1,P4HA1,P4HA1,NUDT13	877,877,877,877,14304
chr11:22848777-22849752	chr11	+	22848966	22849791	True	NM_005256,NM_148893	chr11,chr11	+,-	GAS2,SVIP	-152701,1642
chr12:66221787-66222838	chr12	+	66221834	66222893	True	NM_003483,NR_026825,NM_003484	chr12,chr12,chr12	+,-,+	HMGA2,RPSAP52,HMGA2	-3652,-1080,-3652
chr6:3229985-3230213	chr6	+	3229993	3230251	True	NM_001135750,NM_178012	chr6,chr6	+,-	PSMG4,TUBB2B	28910,-2025
chr9:35491800-35493658	chr9	+	35492334	35493485	True	NM_014806,NM_001099951	chr9,chr9	+,-	RUSC2,FAM166B	-2385,70474
chr2:85662922-85663665	chr2	+	85662997	85663569	True	NM_001747,NM_198482	chr2,chr2	-,+	CAPG,SH2D6	-25321,-1133
chr12:15111872-15112965	chr12	+	15112307	15112951	True	NM_001175,NM_006205	chr12,chr12	-,+	ARHGDIB,PDE6H	1661,13004
chr1:179108649-179110173	chr1	+	179108665	179109386	True	NM_022371,NM_001168239,NM_001136000,NM_005158	chr1,chr1,chr1,chr1	+,-,-,-	TOR3A,ABL2,ABL2,ABL2	-57617,2889,2889,2889
chr14:73926929-73927370	chr14	+	73927066	73927386	True	NM_003744,NM_001005745,NM_001005744,NM_001005743,NM_024644	chr14,chr14,chr14,chr14,chr14	-,-,-,-,+	NUMB,NUMB,NUMB,NUMB,C14orf169	-1780,-1780,-1780,-1780,30257
chr17:4267876-4268170	chr17	+	4268156	4268218	True	NM_003342,NM_182538	chr17,chr17	-,+	UBE2G1,SPNS3	1801,69000
chrX:54961694-54962646	chrX	+	54961910	54962566	True	NM_002625,NM_177556	chrX,chrX	-,+	PFKFB1,TRO	57995,-14719
chr11:86667397-86667654	chr11	+	86667469	86667643	True	NM_012193,NM_001168724	chr11,chr11	-,+	FZD4,TMEM135	-1036,81242
chr4:75230811-75231059	chr4	+	75230819	75230881	True	NM_001432,NM_002089	chr4,chr4	+,-	EREG,CXCL2	-10,-265822
chr7:104652520-104653176	chr7	+	104652573	104652954	True	NM_182931,NR_024586,NM_018682	chr7,chr7,chr7	+,-,+	MLL5,LOC100216545,MLL5	1682,1685,1682
chr9:139683362-139684493	chr9	+	139683370	139684303	True	NM_001039374,NM_032928,NR_024580	chr9,chr9,chr9	+,+,-	KIAA1984,TMEM141,LOC100131193	6486,1473,19054
chr13:45915629-45915916	chr13	+	45915693	45915795	True	NR_002967,NM_003295,NR_024458	chr13,chr13,chr13	-,-,+	SNORA31,TPT1,LOC100190939	-3949,-396,-264
chr20:46127983-46128596	chr20	+	46127986	46128172	True	NM_006534,NM_001174088,NM_001174087,NM_181659,NM_183048	chr20,chr20,chr20,chr20,chr20	+,+,+,+,-	NCOA3,NCOA3,NCOA3,NCOA3,ZMYND8	2428,2428,2428,2428,-142512
chr8:145050367-145050610	chr8	+	145050367	145050567	True	NM_201378,NM_000837,NM_000445	chr8,chr8,chr8	-,+,-	PLEC,GRINA,PLEC	-2670,13658,396
chr11:63870016-63870216	chr11	+	63870037	63870204	True	NM_013280,NM_014067	chr11,chr11	+,-	FLRT1,MACROD1	1157,63431
chr7:158938134-158939357	chr7	+	158938228	158939396	True	NR_024394	chr7	+	LOC154822	-137234
chr8:357995-359677	chr8	+	358066	359713	True	NM_175075,NM_183420,NM_183421,NM_012173	chr8,chr8,chr8,chr8	-,+,+,+	C8orf42,FBXO25,FBXO25,FBXO25	135668,-1319,-1319,-1319
chr1:150571446-150572095	chr1	+	150571641	150572143	True	NM_182763,NR_036211	chr1,chr1	-,+	MCL1,MIR4257	-19427,-47299
chr1:20963128-20964358	chr1	+	20963158	20964258	True	NM_005216,NM_032409	chr1,chr1	-,+	DDOST,PINK1	23829,-3268
chr16:89983680-89984522	chr16	+	89984069	89984447	True	NM_002386,NM_145039,NM_001197181,NM_006086	chr16,chr16,chr16,chr16	+,-,+,+	MC1R,CENPBD1,TUBB3,TUBB3	79,54843,3969,5239
chr17:4890951-4891252	chr17	+	4891071	4891301	True	NM_001171168,NM_015099,NM_001167986,NM_001167987,NM_006612,NM_001167985,NM_001171167,NM_001171166,NM_213726	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,+,-,-,-,-	CAMTA2,CAMTA2,INCA1,INCA1,KIF1C,INCA1,CAMTA2,CAMTA2,INCA1	-406,-111,9654,9654,9941,9654,-406,-111,9654
chr2:101177899-101178971	chr2	+	101178037	101178817	True	NM_004854,NM_024065	chr2,chr2	-,+	CHST10,PDCL3	-143907,600
chr10:30962243-30962530	chr10	+	30962356	30962450	True	NM_183058,NM_005204	chr10,chr10	-,+	LYZL2,MAP3K8	-43709,-239548
chr10:30962243-30962530	chr10	-	29799843	29799937	False	NR_030335,NR_003930	chr10,chr10	-,+	MIR604,LOC387647	34146,-101393
chr1:226923775-226924012	chr1	+	226923921	226923989	True	NM_002221,NM_000447	chr1,chr1	-,+	ITPKB,PSEN2	2937,134283
chr11:74303812-74304019	chr11	+	74303811	74304067	True	NM_006591,NM_001144869	chr11,chr11	+,-	POLD3,LIPT2	-233,-99056
chr2:113241002-113241464	chr2	+	113241070	113241504	True	NM_153712,NM_001164463	chr2,chr2	+,-	TTL,RGPD8	-1378,-49848
chr1:206645992-206646309	chr1	+	206646057	206646257	True	NM_001193321,NM_001193322,NM_014002,NM_001201478	chr1,chr1,chr1,chr1	+,+,+,-	IKBKE,IKBKE,IKBKE,EIF2D	-2522,-2522,-2522,139697
chr19:6771675-6772795	chr19	+	6771894	6772758	True	NM_005490,NM_005428	chr19,chr19	-,+	SH2D3A,VAV1	-4371,-37
chr17:7340740-7341210	chr17	+	7340816	7341218	True	NM_152766,NM_000747,NM_178518,NM_004112	chr17,chr17,chr17,chr17	-,+,+,+	C17orf61,CHRNB1,TMEM102,FGF11	-33366,7187,-2105,1470
chr18:43917449-43918837	chr18	+	43917522	43918723	True	NM_001173129,NM_152470	chr18,chr18	-,+	LOXHD1,RNF165	180384,-3402
chr8:120626598-120628503	chr8	+	120626681	120628172	True	NM_002514,NM_001040092	chr8,chr8	+,-	NOV,ENPP2	-198180,22999
chr7:3342046-3343895	chr7	+	3342172	3343933	True	NM_152744,NM_032415	chr7,chr7	+,-	SDK1,CARD11	-1144,-258663
chr4:88732757-88733103	chr4	+	88732771	88733144	True	NM_001184694,NM_004684	chr4,chr4	+,-	MEPE,SPARCL1	9418,-282116
chr7:99747244-99747488	chr7	+	99747254	99747405	True	NM_018275,NM_001008395	chr7,chr7	-,+	C7orf43,C7orf59	8954,-775
chr20:49640613-49641093	chr20	+	49640713	49641075	True	NM_002237,NM_014484	chr20,chr20	-,+	KCNG1,MOCS3	-1038,-65401
chr17:39225104-39225735	chr17	+	39225414	39225774	True	NM_001165252,NM_033184,NM_033061	chr17,chr17,chr17	-,-,+	LOC730755,KRTAP2-4,KRTAP4-7	-9070,-3283,14684
chr15:74281553-74281981	chr15	+	74281559	74281975	True	NM_004809,NM_033238,NM_033239,NM_033250,NM_002675,NM_033247,NM_033246,NM_033244,NM_033240,NM_033249	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,+,+,+,+,+,+,+,+,+	STOML1,PML,PML,PML,PML,PML,PML,PML,PML,PML	2710,5038,5038,5038,5038,5038,5038,5038,5038,5038
chr22:24104409-24104749	chr22	+	24104719	24104797	True	NM_213720,NM_013378,NM_182520	chr22,chr22,chr22	-,-,+	CHCHD10,VPREB3,C22orf15	5394,-8089,410
chr2:106360435-106360876	chr2	+	106360489	106360877	True	NM_003581,NM_001004722,NM_201557	chr2,chr2,chr2	+,+,-	NCK2,NCK2,FHL2	642,642,-305259
chr12:29396336-29397468	chr12	+	29396586	29397506	True	NM_018099,NM_016570	chr12,chr12	+,-	FAR2,ERGIC2	-20039,136687
chr1:32284664-32285183	chr1	+	32284884	32284994	True	NM_144569,NM_006559	chr1,chr1	-,+	SPOCD1,KHDRBS1	-3304,194496
chrY:252277-252564	chrY	+	252317	252387	True	NR_027232,NM_013239	chrY,chrY	+,-	NCRNA00107,PPP2R3B	-20983,45353
chrY:252277-252564	chrX	+	302317	302387	False	NR_027232,NM_013239	chrX,chrX	+,-	NCRNA00107,PPP2R3B	-20983,45353
chr9:99411737-99413482	chr9	+	99411962	99413229	True	NR_026792,NM_153698	chr9,chr9	+,-	LOC441455,C9orf21	74873,4431
chr1:183387574-183388185	chr1	+	183387612	183388138	True	NM_001174061,NM_015039	chr1,chr1	+,-	SMG7,NMNAT2	53367,22
chr4:23892513-23894240	chr4	+	23892528	23893475	True	NM_003102,NM_013261	chr4,chr4	+,-	SOD3,PPARGC1A	903609,-828
chr13:102042400-102043247	chr13	+	102042477	102043133	True	NM_052867,NM_004791	chr13,chr13	-,+	NALCN,ITGBL1	25738,61832
chr22:39189263-39189845	chr22	+	39189329	39189887	True	NM_005740,NM_004286	chr22,chr22	-,+	DNAL4,GTPBP1	324,-87585
chr22:45634499-45634709	chr22	+	45634510	45634746	True	NM_001009880,NM_001167574	chr22,chr22	-,+	KIAA0930,UPK3A	1954,46121
chr13:96297121-96297425	chr13	+	96297189	96297414	True	NM_006260,NM_198968,NM_014934	chr13,chr13,chr13	+,-,-	DNAJC3,DZIP1,DZIP1	31978,-232,-232
chr6:161118435-161119384	chr6	+	161119004	161119326	True	NM_000301,NM_001168338,NM_005577	chr6,chr6,chr6	+,+,-	PLG,PLG,LPA	3898,3898,-31597
chr11:7697013-7697675	chr11	+	7697017	7697465	True	NM_003621,NM_016229	chr11,chr11	+,-	PPFIBP2,CYB5R2	-162067,-2196
chr7:75569956-75570198	chr7	+	75570117	75570196	True	NM_031925,NR_002955	chr7,chr7	-,+	TMEM120A,SNORA14A	53847,2904
chr1:16370196-16370703	chr1	+	16370201	16370601	True	NM_014424,NM_001165945,NM_000085	chr1,chr1,chr1	-,+,+	HSPB7,CLCNKB,CLCNKB	-24916,4682,-5
chr10:85997829-85999378	chr10	+	85998224	85999373	True	NM_001012720,NM_001012722,NM_002921,NM_015613	chr10,chr10,chr10,chr10	+,+,+,-	RGR,RGR,RGR,LRIT1	5435,5435,5435,1894
chr1:207088616-207089098	chr1	+	207088667	207088990	True	NM_005449,NM_001142473,NM_006850,NM_001193338	chr1,chr1,chr1,chr1	-,-,+,-	FAIM3,FAIM3,IL24,FAIM3	6439,6439,-17930,6296
chr11:65647883-65648622	chr11	+	65648082	65648522	True	NR_037718,NM_198897,NM_004214,NM_016938,NM_001335,NM_006848	chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,+,+	EFEMP2,FIBP,FIBP,EFEMP2,CTSW,CCDC85B	-7677,7538,7538,-7677,-849,9352
chr10:98510262-98510547	chr19	+	49994054	49994120	False	NR_001285,NR_026712,NR_000020,NR_000021,NM_012423,NR_000019,NR_000018,NM_001015,NR_029703	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,+,+,+,-	SNORD35B,RPL13AP5,SNORD33,SNORD32A,RPL13A,SNORD34,SNORD35A,RPS11,MIR150	6855,-3240,-231,-882,-3240,43,311,5513,10055
chr10:98510262-98510547	chr10	+	98510313	98510385	True	NM_152309,NM_001170765	chr10,chr10	-,+	PIK3AP1,LCOR	-30034,81631
chr12:108991913-108992562	chr12	+	108991981	108992601	True	NM_181724,NM_213595	chr12,chr12	-,+	TMEM119,ISCU	-87,-35738
chr7:99957007-99957568	chr7	+	99957042	99957256	True	NM_178238,NR_003613	chr7,chr7	+,-	PILRB,PMS2P1	-1467,-23112
chr20:48428805-48429198	chr20	+	48428807	48429115	True	NM_004776,NM_015266	chr20,chr20	-,+	B4GALT5,SLC9A8	-98386,134
chr7:116311613-116311823	chr7	+	116311641	116311823	True	NM_000245,NR_002330,NM_001127500	chr7,chr7,chr7	+,-,+	MET,ST7OT1,MET	635,282615,635
chr6:100366944-100367895	chr6	+	100366987	100367946	True	NM_021620,NM_001040179	chr6,chr6	+,-	PRDM13,MCHR2	-312388,74207
chr17:1735839-1736311	chr17	+	1735979	1736166	True	NM_052928,NM_002945	chr17,chr17	-,+	SMYD4,RPA1	-2804,-2767
chr19:19174950-19175189	chr19	+	19175059	19175133	True	NM_001017392,NM_178526	chr19,chr19	-,+	SUGP2,SLC25A42	-30679,-307
chr11:96123669-96124180	chr11	+	96123711	96124223	True	NM_024725,NM_003772	chr11,chr11	-,+	CCDC82,JRKL	-628,-604
chr2:113933874-113934478	chr2	+	113933949	113934524	True	NM_012455,NM_003466	chr2,chr2	+,-	PSD4,PAX8	-2440,102024
chr20:45335724-45337506	chr20	+	45335897	45336975	True	NM_030777,NM_033550	chr20,chr20	+,-	SLC2A10,TP53RK	1303,-17621
chr3:128998222-128998662	chr3	+	128998372	128998643	True	NM_006026,NM_001006109,NM_020187	chr3,chr3,chr3	-,+,+	H1FX,C3orf37,C3orf37	36527,-606,-739
chr19:57874557-57874794	chr19	+	57874593	57874721	True	NM_173631,NR_002166,NM_020633	chr19,chr19,chr19	+,+,-	ZNF547,TRAPPC2P1,VN1R1	169,157,93436
chr8:144655694-144655977	chr8	+	144655695	144655977	True	NM_145201,NM_024736,NM_001100878	chr8,chr8,chr8	-,+,-	NAPRT1,GSDMD,C8orf73	4586,-15269,-767
chr19:38923247-38923963	chr19	+	38923423	38924010	True	NM_170604,NM_001146204,NM_001146205,NM_001146206,NM_001146207,NM_001146202,NM_001146203,NM_000540,NM_001042723	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,+,+	RASGRP4,RASGRP4,RASGRP4,RASGRP4,RASGRP4,RASGRP4,RASGRP4,RYR1,RYR1	-6478,-6478,-6478,-6478,-6478,-6478,-6478,329,329
chr4:123139573-123141267	chr4	+	123140124	123141178	True	NM_000586,NM_015312	chr4,chr4	-,+	IL2,KIAA1109	236522,-48417
chrX:24044379-24045651	chrX	+	24044391	24045341	True	NM_030624,NM_001415	chrX,chrX	-,+	KLHL15,EIF2S3	20,27723
chr5:145469460-145469816	chr5	+	145469599	145469749	True	NM_018989,NM_001029869	chr5,chr5	+,-	RBM27,PLAC8L1	113413,14247
chr16:19564780-19566088	chr16	+	19565556	19565888	True	NM_020314,NM_016641	chr16,chr16	+,-	C16orf62,GDE1	848,-32106
chrX:122316911-122317273	chrX	+	122316911	122317223	True	NM_007325,NM_000828,NM_001081550	chrX,chrX,chrX	+,+,-	GRIA3,GRIA3,THOC2	872,872,549731
chr8:144642691-144642907	chr8	+	144642749	144642945	True	NM_024736,NM_001166237,NM_001100878	chr8,chr8,chr8	+,+,-	GSDMD,GSDMD,C8orf73	-2323,-7243,12033
chr12:50496413-50496836	chr12	+	50496442	50496730	True	NM_032901,NM_147190,NM_005276	chr12,chr12,chr12	+,-,+	C12orf62,LASS5,GPD1	9169,64417,1070
chr1:31987570-31989218	chr1	+	31987618	31988880	True	NR_033688,NR_027085	chr1,chr1	-,+	PEF1,LOC284551	121388,-3633
chr9:88713833-88714091	chr9	+	88713903	88714015	True	NM_177937,NM_024635,NM_016548	chr9,chr9,chr9	-,+,-	GOLM1,NAA35,GOLM1	1151,-157897,545
chr16:680017-680324	chr16	+	680051	680369	True	NM_001040165,NM_001040160,NM_032366,NM_001040162,NM_053284,NM_001040161	chr16,chr16,chr16,chr16,chr16,chr16	-,-,-,-,+,-	C16orf13,C16orf13,C16orf13,C16orf13,WFIKKN1,C16orf13	6028,6028,6028,6028,642,6028
chr12:128047265-128047940	chr12	+	128047276	128047982	True	NR_033970,NR_033987	chr12,chr12	-,+	LOC440117,FLJ37505	-688040,318179
chr9:140501679-140501887	chr9	+	140501710	140501900	True	NM_152285,NM_032937	chr9,chr9	+,-	ARRDC1,C9orf37	-1666,11458
chr16:86597965-86598171	chr16	+	86598151	86598215	True	NM_001159380,NM_001159378,NM_001159379,NR_027490,NR_027489,NM_022764,NM_001159377,NM_005251,NR_026674	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	-,-,-,-,-,-,-,+,+	MTHFSD,MTHFSD,MTHFSD,MTHFSD,MTHFSD,MTHFSD,MTHFSD,FOXC2,FLJ30679	-9342,-9310,-9310,-9310,-9310,-9310,-9310,2641,-9276
chrX:152940005-152941313	chrX	+	152940056	152941328	True	NM_001142805,NM_001039582,NM_001135740	chrX,chrX,chrX	+,-,-	SLC6A8,PNCK,PNCK	12423,-240,-1313
chr1:32084066-32084321	chr1	+	32084121	32084321	True	NM_001525,NR_033688	chr1,chr1	+,-	HCRTR1,PEF1	-871,25947
chr5:145560491-145561594	chr5	+	145560536	145561497	True	NM_020117,NM_018989	chr5,chr5	-,+	LARS,RBM27	854,21665
chr1:179334534-179334841	chr1	+	179334746	179334816	True	NM_001136001,NM_144696	chr1,chr1	-,+	ABL2,AXDND1	-135927,38
chr2:232324540-232325709	chr2	+	232324814	232325707	True	NM_005381,NR_004398,NR_002908,NM_145236,NR_002921	chr2,chr2,chr2,chr2,chr2	-,-,-,+,-	NCL,SNORD82,SNORD20,B3GNT7,SNORA75	3551,83,-3580,-64531,-4167
chr1:160041269-160042377	chr1	+	160041308	160042212	True	NM_002241,NM_004983	chr1,chr1	-,+	KCNJ10,KCNJ9	-1257,9147
chr13:98607201-98607892	chr13	+	98607500	98607886	True	NM_178861,NM_002271	chr13,chr13	-,+	RNF113B,IPO5	221685,-1631
chr17:34492941-34493715	chr17	+	34493059	34493135	True	NM_001001417,NM_001001435	chr17,chr17	-,+	TBC1D3B,CCL4L1	10907,45332
chr17:34492941-34493715	chr17	+	34797170	34797246	False	NM_004773,NM_001001418	chr17,chr17	+,-	ZNHIT3,TBC1D3C	45226,10899
chr15:93116025-93116267	chr15	+	93116092	93116286	True	NR_021493,NM_153040	chr15,chr15	-,+	LOC100144604,C15orf32	-599,-101236
chr1:23749414-23750322	chr1	+	23749498	23750050	True	NR_033691,NM_003196	chr1,chr1	+,-	C1orf213,TCEA3	-53838,1261
chr19:51373950-51375708	chr19	+	51373994	51375589	True	NR_002948,NM_005551,NM_001002231	chr19,chr19,chr19	-,+,+	KLKP1,KLK2,KLK2	24117,1099,1099
chr19:55874052-55874261	chr19	+	55874055	55874179	True	NM_000641,NM_144613,NM_001145402,NM_139172	chr19,chr19,chr19,chr19	-,-,-,+	IL11,COX6B2,FAM71E2,TMEM190	7685,-7873,491,14024
chr13:42616760-42618129	chr13	+	42616792	42617956	True	NM_178009,NM_001204504,NM_152910,NM_001009814	chr13,chr13,chr13,chr13	+,+,+,-	DGKH,DGKH,DGKH,KIAA0564	4886,-2678,4886,-81571
chr17:1360208-1360653	chr17	+	1360225	1360461	True	NM_005206,NM_016823,NR_028514	chr17,chr17,chr17	-,-,+	CRK,CRK,LOC100306951	-681,-681,59751
chr15:102255557-102257150	chr15	+	102255789	102257031	True	NM_152334,NM_001005326	chr15,chr15	-,+	TARSL2,OR4F6	7675,88891
chr5:140802231-140802636	chr5	+	140802237	140802407	True	NM_032091,NM_032090,NM_018927,NM_032092,NM_032094,NM_032101,NM_005642,NM_018914,NM_018913,NM_003735,NR_001297	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,-,+,+,+,+	PCDHGA11,PCDHGA10,PCDHGB7,PCDHGA11,PCDHGA12,PCDHGB7,TAF7,PCDHGA11,PCDHGA10,PCDHGA12,PCDHGB8P	-1751,-9545,-5028,-1751,7750,-5074,-101886,-1751,-9545,7750,3445
chr7:102920512-102920876	chr7	+	102920591	102920767	True	NR_027768,NR_003561,NM_004279	chr7,chr7,chr7	-,-,+	DPY19L2P2,DPY19L2P2,PMPCB	196,42,17105
chr1:53481993-53483685	chr1	+	53482017	53483367	True	NM_018281,NM_001007100,NM_001007099,NM_001007250	chr1,chr1,chr1,chr1	-,+,+,+	ECHDC2,SCP2,SCP2,SCP2	-94571,-1459,-1459,-1459
chr19:48282340-48282920	chr19	+	48282463	48282771	True	NM_198479,NM_003009	chr19,chr19	-,+	TPRX1,SEPW1	24144,-673
chr10:121629850-121631598	chr10	+	121630289	121631375	True	NM_024834,NM_007190	chr10,chr10	-,+	MCMBP,SEC23IP	1074,20709
chrX:15691639-15692859	chrX	+	15691992	15692906	True	NM_020665,NR_026551	chrX,chrX	-,+	TMEM27,CA5BP1	-8838,132
chr12:6883887-6884241	chr12	+	6883976	6884158	True	NM_002286,NR_026581,NM_002824	chr12,chr12,chr12	+,-,+	LAG3,MLF2,PTMS	-2357,-21340,-8486
chr1:150338361-150338894	chr1	+	150338384	150338940	True	NM_016022,NM_015203	chr1,chr1	-,+	APH1A,RPRD2	-96852,-1456
chr3:74185080-74185639	chr3	+	74185203	74185677	True	NM_018029,NM_020872	chr3,chr3	+,-	EBLN2,CNTN3	-1074444,384716
chr4:190196515-190197578	chr4	+	190196596	190197521	True	NR_036692,NM_020040	chr4,chr4	+,-	HSP90AA4P,TUBB4Q	196777,708553
chr15:91473753-91474064	chr15	+	91473948	91474106	True	NM_018671,NM_001039675,NM_198527	chr15,chr15,chr15	+,+,-	UNC45A,UNC45A,HDDC3	4108,-589,1718
chr17:62775243-62775628	chr17	+	62775248	62775604	True	NR_026899,NM_138363,NR_027487	chr17,chr17,chr17	-,+,-	LOC146880,CCDC45,LOC146880	2563,-272141,2068
chr1:809925-810404	chr1	+	809940	810448	True	NR_027055,NR_015368	chr1,chr1	-,+	FAM41C,LOC643837	1784,-46927
chr1:161137856-161138931	chr1	+	161137871	161138891	True	NM_001122764,NM_012475,NM_000309,NM_003779,NM_001199874,NM_001199873,NM_001014443	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,-,-,-,+	PPOX,USP21,PPOX,B4GALT3,B4GALT3,B4GALT3,USP21	-1741,-8668,-1741,8917,8917,8917,-8668
chr12:40645873-40647027	chr12	+	40645877	40646825	True	NM_052885,NM_198578	chr12,chr12	-,+	SLC2A13,LRRK2	-146216,-27115
chr11:111171335-111173325	chr11	+	111171626	111173300	True	NM_001136105,NR_034154	chr11,chr11	+,-	C11orf93,C11orf92	-1703,-1087
chr16:28876826-28877279	chr16	+	28876904	28877264	True	NM_001145812,NM_001145797,NM_001145796,NM_001145795,NM_015503,NM_003321	chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,-	SH2B1,SH2B1,SH2B1,SH2B1,SH2B1,TUFM	-1659,-1877,-1877,-1877,-1641,-19175
chr1:120308012-120309273	chr1	+	120308516	120309267	True	NM_001166107,NM_006623,NM_005518	chr1,chr1,chr1	-,+,-	HMGCS2,PHGDH,HMGCS2	2339,-54148,2339
chr3:111293675-111295421	chr3	+	111293925	111295240	True	NM_024508,NM_198196	chr3,chr3	-,+	ZBED2,CD96	18983,-33054
chr16:79825047-79825291	chr16	+	79825110	79825347	True	NM_005360,NM_130897	chr16,chr16	-,+	MAF,DYNLRB2	-190488,749506
chr4:83932191-83933389	chr4	+	83932201	83933226	True	NM_194282,NM_001115008,NM_001115007,NM_016129	chr4,chr4,chr4,chr4	-,-,-,+	LIN54,LIN54,LIN54,COPS4	-219,-219,866,23012
chr19:14225748-14226690	chr19	+	14225835	14226643	True	NR_024282,NM_207518,NM_002730	chr19,chr19,chr19	+,-,-	LOC113230,PRKACA,PRKACA	-42066,-843,1966
chr1:163177141-163177992	chr1	+	163177143	163177592	True	NM_003617,NM_001195303,NM_031423	chr1,chr1,chr1	-,-,+	RGS5,RGS5,NUF2	-4180,-4518,114130
chr8:87735127-87736263	chr8	+	87735259	87736257	True	NM_019098,NM_173538	chr8,chr8	-,+	CNGB3,CNBD1	19697,142418
chr12:110507370-110508873	chr12	+	110507382	110508575	True	NM_207435,NM_031473	chr12,chr12	-,+	C12orf76,IFT81	-1882,53564
chr5:65888821-65890441	chr5	+	65888882	65890460	True	NM_001164664,NM_198828,NM_005582	chr5,chr5,chr5	+,+,-	MAST4,MAST4,CD180	1715,1715,602207
chr1:26670378-26670701	chr1	+	26670383	26670639	True	NM_001039775,NM_001803	chr1,chr1	-,+	AIM1L,CD52	10032,-26023
chr1:149771952-149772633	chr1	+	149772042	149772334	True	NM_001161334,NM_000566	chr1,chr1	-,+	HIST2H2BF,FCGR1A	11644,-17851
chr1:149771952-149772633	chr1	-	120917924	120918042	False	NR_027337,NM_001004340	chr1,chr1	+,-	HIST2H2BA,FCGR1B	-11941,17960
chr1:149771952-149772633	chr1	+	149387113	149387405	False	NR_027484,NM_001024599	chr1,chr1	+,-	FCGR1C,HIST2H2BF	-17878,11874
chr16:69458666-69459178	chr16	+	69458712	69459212	True	NM_030579,NM_005652	chr16,chr16	+,-	CYB5B,TERF2	-265,-38838
chr3:133470693-133471543	chr3	+	133470877	133471568	True	NM_001063,NM_007027	chr3,chr3	+,-	TF,TOPBP1	-5959,-90140
chr2:200334582-200334803	chr2	+	200334666	200334846	True	NM_015265,NM_001172517,NR_026830	chr2,chr2,chr2	-,-,+	SATB2,SATB2,FLJ32063	1193,-4835,-1897
chr6:106776266-106777505	chr6	+	106776610	106777491	True	NM_004849,NM_001624	chr6,chr6	-,+	ATG5,AIM1	-2915,182238
chr3:12609709-12611030	chr3	+	12609858	12611076	True	NM_001195279,NM_014160	chr3,chr3	-,+	LOC100129480,MKRN2	-22895,-11323
chrX:55207809-55209266	chrX	+	55207862	55209071	True	NM_130467,NM_001190708	chrX,chrX	+,-	PAGE5,MTRNR2L10	37719,-77
chr1:72748691-72749008	chr1	+	72748884	72749046	True	NM_153742,NM_173808	chr1,chr1	+,-	CTH,NEGR1	-1872034,-607
chr18:20540319-20541773	chr18	+	20540836	20541777	True	NM_032933,NM_203292	chr18,chr18	-,+	C18orf45,RBBP8	476199,-27055
chr17:4645667-4646197	chr17	+	4645691	4646231	True	NM_001100812,NM_032265,NM_022059,NM_001136046	chr17,chr17,chr17,chr17	-,+,-,+	CXCL16,ZMYND15,CXCL16,ZMYND15	-2468,-2405,-2468,-2423
chr6:138506611-138508345	chr6	+	138506616	138508028	True	NM_021635,NM_020340	chr6,chr6	-,+	PBOV1,KIAA1244	31651,-23614
chr5:149885591-149886224	chr5	+	149885642	149886223	True	NM_001025070,NM_001543	chr5,chr5	-,+	RPS14,NDST1	-56323,1450
chr7:129690211-129691031	chr7	+	129690273	129691066	True	NM_016478,NM_014997	chr7,chr7	-,+	ZC3HC1,KLHDC10	217,19282
chr3:36924202-36924858	chr3	+	36924202	36924563	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	62041,110277
chr12:53771112-53772247	chr12	+	53771338	53772290	True	NM_138473,NM_001173467,NM_003109	chr12,chr12,chr12	+,-,+	SP1,SP7,SP1	1688,-41334,2137
chr19:30871341-30872727	chr19	+	30871360	30872764	True	NM_014717,NM_031448	chr19,chr19	+,-	ZNF536,C19orf12	-8083,-664908
chr14:79746778-79747754	chr14	+	79746806	79747784	True	NM_001007023,NM_001105250,NM_138970	chr14,chr14,chr14	-,+,+	DIO2,NRXN3,NRXN3	930109,-1203,-1203
chr6:15011259-15012303	chr6	+	15011368	15012025	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	234501,651314
chr19:36523145-36523347	chr19	+	36523229	36523385	True	NM_001083961,NM_001199570,NM_015526	chr19,chr19,chr19	+,-,-	WDR62,CLIP3,CLIP3	22397,238,462
chr2:213402073-213402343	chr2	+	213402117	213402391	True	NM_001042599,NM_005235,NM_001025436	chr2,chr2,chr2	-,-,+	ERBB4,ERBB4,SPAG16	1011,1011,746724
chr3:192420503-192420985	chr3	+	192420727	192421003	True	NM_020386,NM_004113	chr3,chr3	+,-	HRASLS,FGF12	537914,24435
chr8:145019351-145019561	chr8	+	145019365	145019609	True	NM_000837,NR_030383,NM_201379,NM_201384,NM_201381,NM_201380,NM_201383,NM_201382	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	+,-,-,-,-,-,-,-	GRINA,MIR661,PLEC,PLEC,PLEC,PLEC,PLEC,PLEC	44616,-8,8529,-5607,-460,5485,-2673,-1255
chr6:49517657-49518153	chr6	+	49517840	49518202	True	NM_001145652,NM_000324	chr6,chr6	+,-	C6orf141,RHAG	8,86435
chr13:79216944-79217777	chr13	+	79217069	79217586	True	NM_024546,NM_001161407	chr13,chr13	-,+	RNF219,NDFIP2	15779,837672
chr15:43426201-43426992	chr15	+	43426278	43427020	True	NM_024956,NM_174916	chr15,chr15	+,-	TMEM62,UBR1	-607,-27992
chr1:16346315-16346912	chr1	+	16346446	16346904	True	NM_014424,NM_004070,NM_001042704	chr1,chr1,chr1	-,+,+	HSPB7,CLCNKA,CLCNKA	-1161,1581,1581
chr5:176738366-176738618	chr5	+	176738437	176738595	True	NM_130781,NM_013237,NM_001142935,NM_031300,NM_001031677	chr5,chr5,chr5,chr5,chr5	-,+,-,-,-	RAB24,PRELID1,MXD3,MXD3,RAB24	-7693,-7653,747,747,-7693
chr1:41486443-41487368	chr1	+	41486532	41487070	True	NR_037868,NM_144990,NM_001168247	chr1,chr1,chr1	+,-,-	LOC100507178,SLFNL1,SLFNL1	-6321,407,377
chr1:61540338-61541674	chr1	+	61540603	61541472	True	NM_001145511,NM_005595,NM_001145512,NM_032027,NM_001134673	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	NFIA,NFIA,NFIA,TM2D1,NFIA	1473,6507,6061,649678,6507
chr16:84076475-84076909	chr16	+	84076554	84076958	True	NM_001080442,NM_019065	chr16,chr16	-,+	SLC38A8,NECAB2	-792,-74368
chr4:15351029-15351341	chr4	+	15351029	15351378	True	NM_001135170,NM_001193534	chr4,chr4	+,-	C1QTNF7,FBXL5	-9528,305707
chr3:14583391-14584743	chr3	+	14583471	14584639	True	NM_016474,NM_001080423	chr3,chr3	+,-	C3orf19,GRIP2	108613,117
chr7:157131743-157132082	chr7	+	157131783	157131951	True	NR_029689,NM_058246,NM_005494	chr7,chr7,chr7	-,+,+	MIR153-2,DNAJB6,DNAJB6	235213,-2135,-2136
chr12:121166043-121166255	chr12	+	121166129	121166228	True	NM_000017,NM_198202	chr12,chr12	+,-	ACADS,POP5	-2609,-146928
chr1:51809836-51810083	chr1	+	51809858	51810120	True	NM_014372,NM_001144832	chr1,chr1	+,-	RNF11,TTC39A	-107964,715
chrX:48826590-48827405	chrX	+	48826690	48827402	True	NM_001167992,NM_004979	chrX,chrX	+,-	PQBP1,KCND1	-70966,899
chr12:113493630-113494320	chr12	+	113493775	113494349	True	NM_004416,NM_001193521	chr12,chr12	+,-	DTX1,RASAL1	1312,79260
chr8:103664423-103666265	chr8	+	103664435	103665941	True	NM_024410,NM_005655,NM_001032282	chr8,chr8,chr8	+,-,-	ODF1,KLF10,KLF10	-100647,2092,277
chr15:32321228-32321714	chr15	+	32321315	32321660	True	NM_001190455,NM_000746,NM_130901	chr15,chr15,chr15	+,+,-	CHRNA7,CHRNA7,OTUD7A	1030,1030,-373773
chr4:151936143-151936362	chr4	+	151936215	151936369	True	NM_006726,NM_001006,NM_001199282	chr4,chr4,chr4	-,+,-	LRBA,RPS3A,LRBA	330,84384,117
chr11:65081078-65081462	chr11	+	65081114	65081414	True	NM_001077241,NM_006779	chr11,chr11	-,+	SLC25A45,CDC42EP2	68778,916
chr19:49946843-49947219	chr19	+	49946934	49947246	True	NM_020309,NM_153329,NM_001145396,NM_017916	chr19,chr19,chr19,chr19	-,+,+,-	SLC17A7,ALDH16A1,ALDH16A1,PIH1D1	-2126,9226,9226,7919
chr13:24469136-24470009	chr13	+	24469380	24470014	True	NM_001135816,NM_005932,NM_001014442,NM_001007537	chr13,chr13,chr13,chr13	+,-,+,-	PCOTH,MIPEP,PCOTH,C1QTNF9B	-5839,-5793,-6403,1163
chr19:48248533-48249058	chr19	+	48248538	48249058	True	NM_015710,NM_198479	chr19,chr19	+,-	GLTSCR2,TPRX1	40,57853
chr11:118554464-118556217	chr11	+	118554617	118556231	True	NM_001144759,NM_007180	chr11,chr11	+,-	PHLDB1,TREH	-76372,-4236
chr12:69746577-69747359	chr12	+	69746675	69747088	True	NM_000239,NM_006530,NR_031692	chr12,chr12,chr12	+,+,-	LYZ,YEATS4,MIR1279	-4605,6443,-79677
chr4:68829042-68830111	chr4	+	68829042	68829852	True	NM_001114387,NR_015446,NM_182606	chr4,chr4,chr4	-,+,-	TMPRSS11A,FTLP10,TMPRSS11A	-14,218157,-14
chr7:120483936-120485425	chr7	+	120484542	120485455	True	NM_198267,NM_012338	chr7,chr7	+,-	ING3,TSPAN12	105361,12777
chr22:36900602-36900917	chr22	+	36900607	36900885	True	NM_001102371,NM_024955,NM_145343	chr22,chr22,chr22	-,-,+	FOXRED2,FOXRED2,APOL1	2313,2255,-251541
chr22:25435627-25435866	chr22	+	25435633	25435863	True	NM_001001663,NM_001145206	chr22,chr22	-,+	TMEM211,KIAA1671	-100319,-11743
chr4:25507262-25507475	chr4	+	25507263	25507391	True	NM_013367,NM_016955	chr4,chr4	+,-	ANAPC4,SEPSECS	-128466,-345059
chr13:44364513-44365233	chr13	+	44364597	44365075	True	NM_017993,NM_001128303	chr13,chr13	-,+	ENOX1,C13orf31	-3491,88344
chr1:205910044-205911272	chr1	+	205910147	205911266	True	NM_052934,NM_001123168,NM_134325	chr1,chr1,chr1	-,+,-	SLC26A9,FAM72A,SLC26A9	1373,227644,1373
chr1:27219555-27220102	chr1	+	27219567	27219989	True	NM_018066,NM_022078,NM_006600	chr1,chr1,chr1	-,-,+	GPN2,GPATCH3,NUDC	-2698,7034,28234
chr3:9918827-9919238	chr3	+	9918855	9919073	True	NM_032492,NM_022094,NM_001199623,NM_001199552,NM_001199551	chr3,chr3,chr3,chr3,chr3	+,-,-,-,-	JAGN1,CIDEC,CIDEC,CIDEC,CIDEC	13197,1717,1473,2915,2915
chr17:42992446-42992656	chr17	+	42992578	42992642	True	NM_001131019,NM_213607,NM_002055	chr17,chr17,chr17	-,+,-	GFAP,CCDC103,GFAP	322,-15475,322
chr19:3967675-3969502	chr19	+	3967879	3969042	True	NM_170678,NM_001348,NR_030367	chr19,chr19,chr19	+,-,-	ITGB1BP3,DAPK3,MIR637	-34829,834,-6369
chr18:43677490-43678002	chr18	+	43677554	43677954	True	NR_026978,NM_138443,NM_004046,NM_001001937	chr18,chr18,chr18,chr18	+,+,-,-	HAUS1,HAUS1,ATP5A1,ATP5A1	6343,6343,383,6295
chr17:64224218-64224773	chr17	+	64224281	64224639	True	NM_002737,NM_000042	chr17,chr17	+,-	PRKCA,APOH	74286,975
chr12:41846875-41848416	chr12	+	41846886	41848341	True	NM_001099650,NM_013377	chr12,chr12	-,+	GXYLT1,PDZRN4	690382,-15397
chr6:41748657-41750218	chr6	+	41748934	41749744	True	NM_001134493,NM_013397,NM_006653	chr6,chr6,chr6	+,+,-	TOMM6,PRICKLE4,FRS3	5436,-485,-1304
chr10:15140382-15140602	chr10	+	15140504	15140610	True	NM_183005,NM_001097590,NM_153244,NM_001039844,NM_006414	chr10,chr10,chr10,chr10,chr10	+,+,-,-,+	RPP38,RPP38,C10orf111,ACBD7,RPP38	-1379,-1379,-1186,-9729,-1379
chr8:144641840-144642414	chr8	+	144641936	144642435	True	NM_024736,NM_001166237,NM_001100878	chr8,chr8,chr8	+,+,-	GSDMD,GSDMD,C8orf73	-1510,-6430,12543
chr17:46806965-46808361	chr17	+	46807130	46808292	True	NR_036150,NR_024103,NM_032391,NM_006361	chr17,chr17,chr17,chr17	-,+,-,-	MIR3185,NCRNA00253,PRAC,HOXB13	-5293,-6640,-7248,-1019
chr4:178681004-178682855	chr4	+	178681190	178682637	True	NR_033655,NR_028342	chr4,chr4	-,+	AGA,LOC285501	-317533,-31336
chr19:14680490-14680952	chr19	+	14680492	14680634	True	NM_004146,NM_001204118	chr19,chr19	-,+	NDUFB7,CLEC17A	2305,13261
chr9:84302303-84302524	chr9	+	84302371	84302473	True	NM_005077,NR_026851	chr9,chr9	-,+	TLE1,FAM75D5	1173,225878
chr19:20145759-20147495	chr19	+	20145936	20147147	True	NM_033196,NM_007138,NM_001077349	chr19,chr19,chr19	-,+,-	ZNF682,ZNF90,ZNF682	3188,41655,2975
chr11:46959516-46960418	chr11	+	46959744	46960146	True	NM_024113,NM_001003677,NM_001003676,NM_001003678,NM_002334	chr11,chr11,chr11,chr11,chr11	+,+,+,+,-	C11orf49,C11orf49,C11orf49,C11orf49,LRP4	-1544,-1544,-1544,-1544,-19571
chr17:45808881-45809658	chr17	+	45808963	45809707	True	NM_145798,NM_013351	chr17,chr17	-,+	OSBPL7,TBX21	89492,902
chr20:38733135-38734701	chr20	+	38733195	38734689	True	NM_003286,NM_005461	chr20,chr20	+,-	TOP1,MAFB	922772,583237
chr4:4860545-4861120	chr4	+	4860605	4860761	True	NM_002448,NM_018659	chr4,chr4	+,-	MSX1,CYTL1	630,160488
chr3:101405359-101405609	chr3	+	101405365	101405545	True	NM_014415,NR_024407,NM_000986	chr3,chr3,chr3	-,+,-	ZBTB11,LOC100009676,RPL24	-9377,-10142,68
chrX:11231004-11231213	chrX	+	11231008	11231222	True	NM_001142,NM_013423	chrX,chrX	+,-	AMELX,ARHGAP6	80310,52923
chr6:34187690-34189013	chr6	+	34188275	34188352	True	NM_002131,NM_001008703	chr6,chr6	+,-	HMGA1,C6orf1	16224,28607
chr8:41911351-41912661	chr8	+	41911429	41912362	True	NM_001134296,NM_001099412,NM_001099413,NM_006766	chr8,chr8,chr8,chr8	+,-,-,-	AP3M2,MYST3,MYST3,MYST3	98101,-1924,-1924,-1924
chr2:48543169-48544837	chr2	+	48543284	48544734	True	NM_001190274,NM_002158	chr2,chr2	-,+	FBXO11,FOXN2	-410352,-1540
chr9:103348319-103348607	chr9	+	103348408	103348602	True	NM_017746,NM_001018116	chr9,chr9	-,+	TEX10,MURC	-233149,-8124
chr10:102990816-102991242	chr10	+	102990863	102991237	True	NR_029380,NM_006562	chr10,chr10	+,-	FLJ41350,LBX1	-1564,-2146
chr6:136875945-136877559	chr6	+	136876332	136877281	True	NM_000288,NM_001198616,NM_001198617,NM_003980	chr6,chr6,chr6,chr6	+,-,-,-	PEX7,MAP7,MAP7,MAP7	266420,-4375,-4375,-4375
chr19:41104134-41104391	chr19	+	41104368	41104430	True	NM_001042544,NM_001042545,NM_004756,NM_003573	chr19,chr19,chr19,chr19	+,+,-,+	LTBP4,LTBP4,NUMBL,LTBP4	-1278,2846,92176,-5347
chr4:73934349-73935176	chr4	+	73934425	73934979	True	NM_000477,NM_173827	chr4,chr4	+,-	ALB,COX18	334992,543
chr1:154974755-154975320	chr1	+	154974867	154975333	True	NM_015872,NM_018655,NM_003029	chr1,chr1,chr1	+,+,-	ZBTB7B,LENEP,SHC1	-66,-8856,-27908
chr9:88963863-88964966	chr9	+	88963863	88964938	True	NM_001185059,NM_001185074,NM_024617,NM_024635	chr9,chr9,chr9,chr9	-,-,-,+	ZCCHC6,ZCCHC6,ZCCHC6,NAA35	4520,4520,4520,-407857
chr13:50745597-50746183	chr13	+	50745782	50746138	True	NR_002612,NR_002183	chr13,chr13	-,+	DLEU2,ST13P4	-46105,15
chr15:91474064-91474454	chr15	+	91474068	91474481	True	NM_018671,NM_001039675,NM_198527	chr15,chr15,chr15	+,+,-	UNC45A,UNC45A,HDDC3	3733,-709,1343
chr17:76625097-76625369	chr17	+	76625196	76625402	True	NM_173628,NM_024419	chr17,chr17	-,+	DNAH17,PGS1	-51720,-250512
chr5:124145228-124145438	chr5	+	124145229	124145475	True	NM_004384,NM_020747	chr5,chr5	+,-	CSNK1G3,ZNF608	-1297489,-64424
chr9:19895636-19895890	chr9	+	19895661	19895935	True	NM_020344,NM_001010887	chr9,chr9	-,+	SLC24A2,ACER2	-107070,-486787
chr20:62182677-62183568	chr20	+	62182759	62182907	True	NM_024059,NM_080823	chr20,chr20	+,-	C20orf195,SRMS	1465,-3902
chr22:42228402-42228633	chr22	+	42228449	42228611	True	NM_004599,NM_052945	chr22,chr22	+,-	SREBF2,TNFRSF13C	494,94260
chr1:12079029-12079258	chr1	+	12079191	12079307	True	NM_021933,NM_138346	chr1,chr1	+,-	MIIP,KIAA2013	204,-92706
chr1:108710335-108711311	chr1	+	108710415	108711326	True	NM_213651,NM_001143987	chr1,chr1	-,+	SLC25A24,NBPF6	24094,281577
chr1:36184807-36185081	chr1	+	36184857	36185090	True	NM_017629,NM_152374	chr1,chr1	+,-	EIF2C4,C1orf216	88737,-67
chr13:25670455-25671265	chr13	+	25670492	25671022	True	NM_152704,NM_030979	chr13,chr13	-,+	FAM123A,PABPC3	74885,-267
chr12:6484217-6484711	chr12	+	6484251	6484759	True	NM_001159576,NM_002342,NM_001159575,NM_001038	chr12,chr12,chr12,chr12	-,+,-,-	SCNN1A,LTBR,SCNN1A,SCNN1A	21,8597,1814,196
chr7:6100946-6102453	chr7	+	6101187	6102415	True	NM_001134335,NM_032172,NM_014413	chr7,chr7,chr7	-,+,-	EIF2AK1,USP42,EIF2AK1	-2327,42134,-2327
chr14:20109876-20111286	chr22	+	16377611	16378725	False	NM_001005239,NR_001591	chr22,chr22	-,+	OR11H1,psiTPTE22	71129,704075
chr14:20109876-20111286	chr14	+	20109991	20111091	True	NM_001197287,NM_172194	chr14,chr14	-,+	OR11H2,OR4Q3	71450,104495
chr11:65381861-65382239	chr11	+	65381964	65382146	True	NM_032223,NM_002419	chr11,chr11	+,-	PCNXL3,MAP3K11	1636,-244
chr13:77566532-77566910	chr13	+	77566625	77566887	True	NM_006493,NM_012158	chr13,chr13	+,-	CLN5,FBXL3	-617,34494
chr19:44306613-44307070	chr19	+	44306634	44306968	True	NM_001031749,NM_181845	chr19,chr19	-,+	LYPD5,ZNF283	-21,24504
chr11:418704-419131	chr11	+	418708	418988	True	NM_001135053,NM_007183,NM_001135054,NM_021805	chr11,chr11,chr11,chr11	-,+,-,-	SIGIRR,PKP3,SIGIRR,SIGIRR	-1311,-24542,-3709,-1311
chr3:57197061-57198259	chr3	+	57197142	57198099	True	NM_012096,NM_017563	chr3,chr3	+,-	APPL1,IL17RD	63665,1354
chr17:65371165-65371745	chr17	+	65371224	65371541	True	NM_002816,NM_181671,NM_012417,NM_174871	chr17,chr17,chr17,chr17	-,+,+,-	PSMD12,PITPNC1,PITPNC1,PSMD12	-8503,2382,2382,-8503
chr8:17112844-17114252	chr8	+	17113051	17114060	True	NM_152415,NM_013354,NM_001145152,NM_054026	chr8,chr8,chr8,chr8	+,-,+,-	VPS37A,CNOT7,VPS37A,CNOT7	-8710,-8664,-8710,-8664
chr1:27321167-27321412	chr1	+	27321211	27321375	True	NM_052943,NM_001013642	chr1,chr1	-,+	FAM46B,TRNP1	18008,-1067
chr5:173008646-173009856	chr5	+	173008656	173009774	True	NR_027108,NR_027109,NM_001159651	chr5,chr5,chr5	+,+,-	LOC285593,LOC285593,BOD1	-2064,-2053,33942
chr19:44486731-44488141	chr19	+	44487081	44488162	True	NM_003445,NM_198089,NM_003425	chr19,chr19,chr19	+,+,-	ZNF155,ZNF155,ZNF45	192,192,-47670
chr22:39022588-39023292	chr22	+	39023049	39023302	True	NM_001002880,NM_001013647	chr22,chr22	+,-	CBY1,LOC646851	29355,29385
chr9:20622849-20623224	chr9	+	20622914	20623222	True	NM_004529,NM_017794	chr9,chr9	-,+	MLLT3,KIAA1797	-400,35086
chr7:102715064-102715274	chr7	+	102715103	102715223	True	NM_031905,NM_001161012,NM_001161013,NM_001161010,NM_001161011,NM_001161009,NM_001111038,NM_145032	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,+,+,-,-	ARMC10,ARMC10,ARMC10,ARMC10,ARMC10,ARMC10,FBXL13,FBXL13	104,104,104,104,104,104,115,-88
chr19:21512189-21512644	chr19	+	21512289	21512431	True	NR_027130,NM_021269	chr19,chr19	+,-	ZNF738,ZNF708	29303,-77
chr6:107777447-107779409	chr6	+	107778099	107779325	True	NM_018013,NM_020381	chr6,chr6	+,-	SOBP,PDSS2	31991,1518
chr13:20053135-20054093	chr13	+	20053442	20053805	True	NR_034026,NM_001141968	chr13,chr13	+,-	LOC100287114,TPTE2	-134314,57153
chr19:7659020-7659540	chr19	+	7659179	7659389	True	NM_020196,NM_020902,NM_001080429	chr19,chr19,chr19	-,+,+	XAB2,KIAA1543,KIAA1543	35108,1398,1398
chr22:35538210-35539894	chr22	+	35538396	35539570	True	NM_001008494,NM_005368	chr22,chr22	+,-	ISX,MB	-76317,473864
chr11:65406192-65406738	chr11	+	65406192	65406552	True	NM_006747,NM_153253,NM_001145138	chr11,chr11,chr11	+,+,-	SIPA1,SIPA1,RELA	-665,1039,23941
chr12:124777628-124778320	chr12	+	124777785	124778253	True	NM_001077261,NM_181709	chr12,chr12	-,+	NCOR2,FAM101A	273807,-4126
chr15:85113970-85114306	chr15	+	85113985	85114351	True	NM_017894,NR_003661	chr15,chr15	+,-	ZSCAN2,UBE2Q2P1	29897,41
chr1:28973503-28974105	chr1	+	28973663	28973748	True	NR_004407,NM_005644,NM_001135218	chr1,chr1,chr1	+,-,-	RNU11,TAF12,TAF12	1363,-4059,-4059
chr19:17831203-17831706	chr19	+	17831249	17831625	True	NM_001080421,NM_018174	chr19,chr19	-,+	UNC13A,MAP1S	-32241,-997
chr11:63436598-63437134	chr11	+	63436603	63437141	True	NM_006054,NM_015459	chr11,chr11	+,-	RTN3,ATL3	11780,2001
chr8:49834265-49834780	chr8	+	49834382	49834817	True	NM_003068,NM_001007176	chr8,chr8	-,+	SNAI2,C8orf22	-383,150085
chr16:4898300-4898821	chr16	+	4898318	4898681	True	NM_001079514,NM_016936,NM_032569	chr16,chr16,chr16	+,+,-	UBN1,UBN1,GLYR1	-457,3395,-1015
chr11:12309336-12309858	chr11	+	12309342	12309898	True	NM_013253,NM_032867	chr11,chr11	-,+	DKK3,MICALCL	-278425,-946
chr20:17245715-17247425	chr20	+	17245848	17247203	True	NM_001195,NM_002594	chr20,chr20	-,+	BFSP1,PCSK2	264867,-38303
chr17:79305450-79305791	chr17	+	79305591	79305795	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	67744,-1117
chr2:201938345-201940008	chr2	+	201938962	201939742	True	NM_002491,NM_173822	chr2,chr2	+,-	NDUFB3,FAM126B	-2559,-2570
chr12:125548084-125548717	chr12	+	125548111	125548513	True	NM_032656,NM_023928	chr12,chr12	-,+	DHX37,AACS	-74444,1411
chr6:105406449-105407069	chr6	+	105406448	105406821	True	NM_001004317,NM_020771	chr6,chr6	+,-	LIN28B,HACE1	-1583,-98654
chr3:9814512-9815147	chr3	+	9814519	9814670	True	NM_001024959,NM_003656	chr3,chr3	+,-	ARPC4,CAMK1	19508,-2851
chr14:75390807-75392280	chr14	+	75390811	75392257	True	NM_031464,NR_033814	chr14,chr14	-,+	RPS6KL1,DLST	-1666,-42268
chr1:11723871-11724167	chr1	+	11724020	11724172	True	NM_001014765,NM_012168,NM_018438,NM_033182,NM_183412,NM_183413	chr1,chr1,chr1,chr1,chr1,chr1	+,-,+,+,+,+	FBXO44,FBXO2,FBXO6,FBXO44,FBXO44,FBXO44	-9157,-9132,-23,-9157,-9639,-9157
chr15:25424728-25425825	chr15	+	25424915	25425679	True	NR_003358,NR_003296,NR_003351,NR_003344,NR_003298,NR_003299,NM_130838,NR_001291,NR_003300,NR_003301,NR_003302,NR_003303,NR_003304,NR_003297,NR_003294,NR_003295	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,-,+,+,+,+,+,+,+,+,+	SNORD115-43,SNORD115-4,SNORD115-36,SNORD115-29,SNORD115-6,SNORD115-7,UBE3A,SNORD115-1,SNORD115-8,SNORD115-9,SNORD115-10,SNORD115-11,SNORD115-12,SNORD115-5,SNORD115-2,SNORD115-3	8881,-2987,8881,8881,-36,1852,225024,-9096,3773,-1078,-1078,8881,-1078,-1081,-7184,-4892
chr1:149890166-149891217	chr1	+	149890213	149891125	True	NM_014849,NM_005850,NM_016074	chr1,chr1,chr1	-,-,+	SV2A,SF3B4,BOLA1	-779,9075,-19109
chr2:136636906-136637140	chr2	+	136636936	136637173	True	NM_014607,NM_005915	chr2,chr2	+,-	UBXN4,MCM6	-137799,-2925
chr16:8807097-8807464	chr16	+	8807183	8807497	True	NM_001127448,NM_000663,NM_015421	chr16,chr16,chr16	+,+,-	ABAT,ABAT,TMEM186	7075,-411,84058
chr3:47023407-47023946	chr3	+	47023414	47023774	True	NM_144716,NM_015175	chr3,chr3	-,+	CCDC12,NBEAL2	-5144,-2292
chr15:90038664-90039382	chr15	+	90038672	90039408	True	NM_016321,NM_152259	chr15,chr15	-,+	RHCG,C15orf42	441,79409
chr9:35080560-35080806	chr9	+	35080653	35080737	True	NM_007126,NM_203299,NM_004629	chr9,chr9,chr9	-,+,-	VCP,C9orf131,FANCG	-7914,-38486,-640
chr14:77099641-77100002	chr14	+	77099889	77100029	True	NM_015305,NM_014909	chr14,chr14	-,+	ANGEL1,VASH1	179304,128205
chr20:36160091-36160510	chr20	+	36160252	36160556	True	NM_181689,NM_001167820,NM_001167823,NM_001167822,NM_006698,NM_001167821	chr20,chr20,chr20,chr20,chr20,chr20	+,-,-,-,-,-	NNAT,BLCAP,BLCAP,BLCAP,BLCAP,BLCAP	-10696,-3919,-7299,-4169,-3919,-4118
chr19:51588298-51589295	chr19	+	51588632	51589003	True	NM_022046,NM_014441	chr19,chr19	-,+	KLK14,SIGLEC9	-1130,39133
chr13:22022829-22024378	chr13	+	22023445	22024415	True	NM_153251,NM_002010	chr13,chr13	-,+	ZDHHC20,FGF9	9143,220799
chr4:123297241-123299161	chr4	+	123297724	123299031	True	NM_000586,NM_139243,NM_001159295,NM_001159285	chr4,chr4,chr4,chr4	-,+,+,+	IL2,ADAD1,ADAD1,ADAD1	78677,1089,1563,1563
chr19:35771946-35773260	chr19	+	35771956	35773140	True	NM_001199216,NM_152481,NM_002361,NM_080600,NM_021175	chr19,chr19,chr19,chr19,chr19	+,-,+,+,+	MAG,FAM187B,MAG,MAG,HAMP	9848,-52328,9848,9848,269
chr11:77532180-77533205	chr11	+	77532219	77533052	True	NM_016578,NM_024684	chr11,chr11	-,+	RSF1,C11orf67	-339,-62
chr15:74288386-74290285	chr15	+	74288740	74290250	True	NM_004809,NM_033238,NM_033239,NM_033250,NM_002675,NM_033247,NM_033246,NM_033244,NM_033240,NM_033249	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,+,+,+,+,+,+,+,+,+	STOML1,PML,PML,PML,PML,PML,PML,PML,PML,PML	-4105,-1777,-1777,-1777,-1777,-1777,-1777,-1777,-1777,-1777
chr1:144520372-144520663	chr1	+	144520372	144520661	True	NR_024584,NM_001037675	chr1,chr1	-,+	LOC728875,NBPF9	1358,94297
chr1:144520372-144520663	chr1	+	147931322	147931374	False	NM_001097616,NR_027468	chr1,chr1	+,-	GPR89C,FLJ39739	-505806,656
chr1:144520372-144520663	chr1	+	143743799	143743851	False	NR_033189,NR_027469,NR_027468	chr1,chr1,chr1	+,-,-	LOC100130000,LOC100286793,FLJ39739	-56720,786,656
chr1:144520372-144520663	chr1	+	144340124	144340176	False	NR_024584,NM_001037675,NR_024510,NR_024511	chr1,chr1,chr1,chr1	-,+,-,-	LOC728875,NBPF9,LOC728855,LOC728855	1629,274782,647,647
chr20:817786-819045	chr20	+	818018	819084	True	NM_031424,NM_033409,NM_001042353,NM_207121	chr20,chr20,chr20,chr20	+,-,+,+	FAM110A,C20orf54,FAM110A,FAM110A	6200,-68790,-3715,-1360
chr10:62132445-62133976	chr10	+	62132496	62133964	True	NM_001170406,NM_020987	chr10,chr10	+,-	CDK1,ANK3	404124,15720
chr5:34031794-34033428	chr5	+	34032034	34033426	True	NM_030945,NM_016568,NM_181435	chr5,chr5,chr5	-,+,-	C1QTNF3,RXFP3,C1QTNF3	9995,-95595,9995
chr2:68466038-68467961	chr2	+	68466299	68467859	True	NM_000945,NM_020143	chr2,chr2	-,+	PPP3R1,PNO1	11842,-81346
chr4:176984737-176985145	chr4	+	176984736	176984846	True	NM_170710,NM_201592,NM_181265	chr4,chr4,chr4	+,-,+	WDR17,GPM6A,WDR17	2138,-61088,2138
chr4:55523554-55523816	chr4	+	55523554	55523834	True	NM_002253,NM_000222,NM_001093772	chr4,chr4,chr4	-,+,+	KDR,KIT,KIT	467978,260,260
chr10:65016851-65018369	chr10	+	65017061	65018369	True	NM_004241,NM_030759	chr10,chr10	-,+	JMJD1C,NRBF2	10671,-124118
chr4:54898700-54899144	chr4	+	54898787	54899153	True	NM_133267,NM_012110	chr4,chr4	+,-	GSX2,CHIC2	67094,31685
chr4:54898700-54899144	chr4	-	54902670	54902720	False	NM_133267,NM_012110	chr4,chr4	+,-	GSX2,CHIC2	63527,28118
chr17:15459321-15459961	chr17	+	15459522	15459680	True	NM_145301,NM_001135036,NR_037924,NM_001204478,NM_001130842	chr17,chr17,chr17,chr17,chr17	-,-,-,-,+	FAM18B2,FAM18B2,FAM18B2-CDRT4,FAM18B2-CDRT4,ZNF286A	7319,7319,7319,7319,143210
chr16:31365115-31365908	chr16	+	31365275	31365935	True	NM_000887,NM_005205	chr16,chr16	+,-	ITGAX,COX6A2	573,73864
chr1:84413669-84415100	chr1	+	84413712	84414970	True	NM_207578,NM_024686	chr1,chr1	+,-	PRKACB,TTLL7	128774,49913
chr4:89626170-89627994	chr4	+	89626838	89627898	True	NR_002806,NM_153757	chr4,chr4	+,-	FAM13AOS,NAP1L5	3041,-7815
chr1:40023945-40024891	chr1	+	40024096	40024786	True	NR_003929,NM_181809,NR_002983	chr1,chr1,chr1	-,+,-	PPIEL,BMP8A,SNORA55	634,-66830,8446
chr2:113876536-113877085	chr2	+	113876715	113877023	True	NM_000577,NM_173843,NM_173841,NM_173178,NM_173842	chr2,chr2,chr2,chr2,chr2	+,+,+,-,+	IL1RN,IL1RN,IL1RN,IL1F8,IL1RN	-1296,-1296,-1296,-66275,8114
chr19:55888318-55888982	chr19	+	55888335	55888937	True	NM_139172,NM_000991,NM_000641,NM_001190764,NM_001136135,NM_001136134,NM_001136137,NM_001136136	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,-,-,+,+,+,+	TMEM190,RPL28,IL11,LOC388564,RPL28,RPL28,RPL28,RPL28	-182,8362,-6521,6740,8362,8362,8362,8362
chr3:64010001-64010980	chr3	+	64010180	64010874	True	NM_014814,NM_001128149	chr3,chr3	-,+	PSMD6,ATXN7	-1060,-56813
chr22:47022035-47022320	chr22	+	47022084	47022216	True	NM_015124,NM_014246	chr22,chr22	+,-	GRAMD4,CELSR1	441,-89017
chr21:46826566-46826864	chr21	+	46826594	46826863	True	NM_130445,NR_028082	chr21,chr21	+,-	COL18A1,NCRNA00175	-1548,18142
chr2:234674996-234676332	chr2	+	234675439	234676354	True	NR_037696,NM_000463	chr2,chr2	-,+	LOC100286922,UGT1A1	-11448,-6577
chr1:160254667-160255153	chr1	+	160254800	160255184	True	NR_036492,NR_002190,NM_002857,NM_001193644,NR_036493	chr1,chr1,chr1,chr1,chr1	-,+,-,-,-	PEX19,SUMO1P3,PEX19,PEX19,PEX19	29,31870,29,29,29
chr17:59668534-59670322	chr17	+	59668691	59670117	True	NM_199290,NM_018488	chr17,chr17	-,+	NACA2,TBX4	-128,-134935
chr3:110789507-110789762	chr3	+	110789569	110789663	True	NM_024508,NM_015480	chr3,chr3	-,+	ZBED2,PVRL3	524553,1201
chr5:115174742-115175335	chr5	+	115174952	115175369	True	NM_001284,NR_033362,NR_033363,NM_004707	chr5,chr5,chr5,chr5	+,-,-,-	AP3S1,ATG12,ATG12,ATG12	2249,2236,2236,2236
chrX:102630607-102631522	chrX	+	102631059	102631483	True	NM_206915,NM_206917,NM_014380,NM_032621	chrX,chrX,chrX,chrX	+,+,+,-	NGFRAP1,NGFRAP1,NGFRAP1,BEX2	0,0,625,-65085
chr3:195451688-195452677	chr3	+	195451741	195451967	True	NM_001098516,NM_004532,NM_152673	chr3,chr3,chr3	+,-,+	MUC20,MUC4,MUC20	-694,87231,-4039
chr3:195451688-195452677	chr3	+	195345689	195345915	False	NM_001647,NR_003265	chr3,chr3	-,+	APOD,SDHAP2	-34613,38994
chr18:61020119-61021470	chr18	+	61020448	61021425	True	NM_002035,NM_002639	chr18,chr18	-,+	KDSR,SERPINB5	13131,122718
chr14:45555437-45556935	chr14	+	45555669	45556770	True	NM_017922,NM_002013	chr14,chr14	+,-	PRPF39,FKBP3	-2422,47017
chr2:234161327-234162289	chr2	+	234161332	234162330	True	NM_019850,NM_001190267,NM_001190266,NM_198890,NM_030803,NM_017974	chr2,chr2,chr2,chr2,chr2,chr2	-,+,+,+,+,+	NGEF,ATG16L1,ATG16L1,ATG16L1,ATG16L1,ATG16L1	-283381,-1168,-1168,-1168,-1168,-1168
chr19:19780461-19781208	chr19	+	19780596	19780994	True	NM_020410,NM_033204	chr19,chr19	-,+	ATP13A1,ZNF101	-6093,-989
chr9:22451423-22452670	chr9	+	22451488	22452654	True	NM_022160,NM_078487	chr9,chr9	+,-	DMRTA1,CDKN2B	-4699,-442176
chr12:4828341-4828601	chr12	+	4828344	4828576	True	NM_006422,NM_017417	chr12,chr12	-,+	AKAP3,GALNT8	-74001,1175
chr2:203737543-203738315	chr2	+	203737543	203738355	True	NM_138468,NM_001104586,NM_178231	chr2,chr2,chr2	-,+,-	ICA1L,ALS2CR8,ICA1L	-1172,38622,-1348
chr11:7274205-7274852	chr11	+	7274246	7274754	True	NM_013249,NM_175733	chr11,chr11	-,+	ZNF214,SYT9	-232660,-1123
chr2:152594438-152595863	chr2	+	152594460	152595725	True	NM_001164507,NM_001177665,NM_004543,NM_001164508	chr2,chr2,chr2,chr2	-,+,-,-	NEB,RIF1,NEB,NEB	-3459,-327908,-3459,-3459
chr12:7916223-7916926	chr12	+	7916347	7916451	True	NM_203503,NM_001145465	chr12,chr12	-,+	CLEC4C,NANOGNB	-14278,1360
chr1:27931529-27931866	chr1	+	27931529	27931865	True	NM_001029882,NM_001143912	chr1,chr1	-,+	AHDC1,FAM76A	-1386,120624
chr1:226112197-226112666	chr1	+	226112466	226112554	True	NM_000120,NM_013328	chr1,chr1	+,-	EPHX1,PYCR2	-99522,-501
chr5:125771237-125772061	chr5	+	125771248	125771778	True	NM_023927,NM_001182	chr5,chr5	+,-	GRAMD3,ALDH7A1	-12430,159368
chr3:108215975-108216827	chr3	+	108216214	108216825	True	NM_014648,NM_014981	chr3,chr3	+,-	DZIP3,MYH15	91511,31395
chr15:52124099-52124748	chr15	+	52124429	52124759	True	NM_014547,NM_001143917	chr15,chr15	+,-	TMOD3,LYSMD2	-2665,-80779
chr19:20843842-20844061	chr19	+	20843864	20844096	True	NM_001076675,NR_034060,NM_145297	chr19,chr19,chr19	-,+,-	ZNF626,ZNF85,ZNF626	356,261962,356
chr17:7905290-7905926	chr17	+	7905314	7905672	True	NM_000180,NR_030697	chr17,chr17	+,-	GUCY2D,TRAPPC1	315,-69997
chr8:12871313-12872172	chr8	+	12871655	12872213	True	NM_001164271,NM_001099677	chr8,chr8	-,+	DLC1,KIAA1456	101596,-1933
chr5:1552180-1552734	chr5	+	1552236	1552780	True	NM_024830,NM_004553	chr5,chr5	-,+	LPCAT1,NDUFS6	-28160,248715
chr8:23705851-23706819	chr8	+	23706129	23706855	True	NM_003155,NM_016612	chr8,chr8	-,+	STC1,SLC25A37	5515,-319818
chr6:131496926-131498476	chr6	+	131497262	131498366	True	NM_001431,NM_016377	chr6,chr6	-,+	EPB41L2,AKAP7	-112800,-30852
chr22:24269094-24270859	chr22	+	24269101	24270807	True	NM_001080843,NM_002415	chr22,chr22	-,+	GSTT2B,MIF	32619,-32587
chr1:48246744-48247113	chr1	+	48246835	48247099	True	NM_001194986,NM_004474	chr1,chr1	-,+	LOC388630,FOXD2	215513,-345197
chr20:2446189-2446711	chr20	+	2446347	2446670	True	NR_003684,NM_003091,NM_080751,NM_198216	chr20,chr20,chr20,chr20	-,-,+,-	SNORD119,SNRPB,TMC2,SNRPB	-2654,4879,70582,4879
chr16:56482958-56484401	chr16	+	56482980	56484441	True	NM_018233,NM_007006	chr16,chr16	+,-	OGFOD1,NUDT21	982,870
chr6:167277622-167278397	chr6	+	167277826	167278434	True	NM_007045,NM_001006932	chr6,chr6	+,-	FGFR1OP,RPS6KA2	134381,-2055
chr6:109163600-109164752	chr6	+	109164312	109164684	True	NM_001199934,NM_032131	chr6,chr6	-,+	SESN1,ARMC2	165557,4934
chr10:95720841-95721237	chr10	+	95720940	95721242	True	NR_002319,NM_016341	chr10,chr10	-,+	PIPSL,PLCE1	480,32503
chr11:110172042-110172784	chr11	+	110172244	110172697	True	NM_002906,NM_004109	chr11,chr11	-,+	RDX,FDX1	-4807,127896
chr16:31226191-31226694	chr16	+	31226341	31226717	True	NM_001008274,NM_152901	chr16,chr16	+,-	TRIM72,PYDC1	-1050,1728
chr1:36185448-36186141	chr1	+	36185498	36185943	True	NM_017629,NM_152374	chr1,chr1	+,-	EIF2C4,C1orf216	87884,-708
chr1:154830351-154831633	chr1	+	154830364	154831661	True	NM_001826,NM_170782	chr1,chr1	+,-	CKS1B,KCNN3	115456,727
chr16:71732043-71733542	chr16	+	71732272	71733564	True	NR_033337,NM_001017967	chr16,chr16	-,+	SNORA70D,MARVELD3	4,-72253
chr15:25421932-25422656	chr15	+	25422119	25422631	True	NR_003304,NM_130838,NR_003298,NR_003299,NR_001291,NR_003300,NR_003301,NR_003302,NR_003296,NR_003297,NR_003294,NR_003295	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,-,+,+,+,+,+,+,+,+,+,+	SNORD115-12,UBE3A,SNORD115-6,SNORD115-7,SNORD115-1,SNORD115-8,SNORD115-9,SNORD115-10,SNORD115-4,SNORD115-5,SNORD115-2,SNORD115-3	1256,228072,3012,4900,-6300,6821,1256,1256,-191,1253,-4388,-2096
chr10:116701836-116703012	chr10	+	116701921	116702827	True	NM_139169,NM_001003408	chr10,chr10	+,-	TRUB1,ABLIM1	-4021,-257507
chr5:24604904-24605380	chr5	+	24605220	24605382	True	NM_020227,NM_006727	chr5,chr5	+,-	PRDM9,CDH10	-1097558,39755
chr15:85924677-85924920	chr15	+	85924869	85924969	True	NM_007200,NR_031682,NM_006738	chr15,chr15,chr15	+,-,+	AKAP13,MIR1276,AKAP13	-1055,388898,-1055
chr11:1591876-1592099	chr11	+	1591883	1592005	True	NM_004420,NR_021489	chr11,chr11	-,+	DUSP8,LOC338651	1195,1965
chr5:172385121-172385428	chr5	+	172385287	172385469	True	NM_016093,NR_026682,NR_026683	chr5,chr5,chr5	+,-,-	RPL26L1,LOC100268168,LOC100268168	969,954,361
chr9:114936177-114936433	chr9	+	114936180	114936482	True	NM_022486,NM_001195822	chr9,chr9	-,+	SUSD1,HSDL2	1124,205706
chr16:67232141-67232919	chr16	+	67232235	67232905	True	NM_178516,NM_001950,NM_024712,NR_029887	chr16,chr16,chr16,chr16	-,+,+,-	EXOC3L1,E2F4,ELMO3,MIR328	-8128,-6218,122,3443
chr6:117005369-117006421	chr6	+	117005368	117006417	True	NM_145062,NM_002269	chr6,chr6	-,+	ZUFSP,KPNA5	-15395,-3067
chr19:51605553-51606516	chr19	+	51605622	51606537	True	NM_145232,NM_014441	chr19,chr19	-,+	CTU1,SIGLEC9	5161,21599
chr1:44409956-44410322	chr1	+	44409969	44410317	True	NM_014652,NM_006934	chr1,chr1	+,-	IPO13,SLC6A9	2160,72730
chr16:16041765-16042471	chr16	+	16041950	16042282	True	NM_019900,NM_144600,NM_004996,NM_019862,NM_019898,NM_019899	chr16,chr16,chr16,chr16,chr16,chr16	+,-,+,+,+,+	ABCC1,FOPNL,ABCC1,ABCC1,ABCC1,ABCC1	1151,-59503,1151,1151,1151,1151
chr13:20209590-20210346	chr13	+	20209742	20210394	True	NM_199254,NM_017520	chr13,chr13	-,+	TPTE2,MPHOSPH8	-98839,-2013
chrX:16733155-16734078	chrX	+	16733283	16733927	True	NM_032796,NM_019857,NM_175859,NR_033181,NM_001144002	chrX,chrX,chrX,chrX,chrX	+,-,-,+,-	SYAP1,CTPS2,CTPS2,SYAP1,CTPS2	3779,-2224,-2508,3779,-2943
chr11:126137710-126138361	chr11	+	126137796	126138396	True	NM_001177842,NR_037648,NM_003139,NM_017547,NR_037647	chr11,chr11,chr11,chr11,chr11	-,+,-,+,+	SRPR,FOXRED1,SRPR,FOXRED1,FOXRED1	531,643,531,538,538
chr7:6959173-6960583	chr7	+	6959412	6960016	True	NM_198097,NM_173565	chr7,chr7	-,+	C7orf28B,RSPH10B	-93486,-165736
chr17:62009206-62009694	chr17	+	62009259	62009694	True	NM_001164257,NM_001039933,NM_000626,NM_021602	chr17,chr17,chr17,chr17	+,-,-,-	C17orf72,CD79B,CD79B,CD79B	66016,60,60,60
chr20:62327115-62327315	chr20	+	62327118	62327340	True	NM_001134758,NM_003823	chr20,chr20	-,+	ARFRP1,TNFRSF6B	12065,663
chr9:66493603-66493961	chr9	+	66493653	66494003	True	NR_024443,NR_024496	chr9,chr9	-,+	LOC100133920,LOC442421	537029,265
chr9:66493603-66493961	chr9	-	68377911	68378067	False	NR_033907,NR_034006	chr9,chr9	-,+	LOC642236,LOC100132352	76464,348473
chr9:66493603-66493961	chr9	+	45356514	45356582	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-366329,-1725784
chr14:77606420-77606855	chr14	+	77606455	77606863	True	NM_174976,NM_020431	chr14,chr14	-,+	ZDHHC22,TMEM63C	1321,41238
chr19:11672577-11673148	chr19	+	11672774	11672950	True	NM_032377,NM_001299	chr19,chr19	-,+	ELOF1,CNN1	-2723,-23254
chr22:20863909-20864283	chr22	+	20863944	20864302	True	NM_001003891,NR_033825,NM_015889	chr22,chr22,chr22	+,-,+	MED15,KLHL22,MED15	-2109,-13774,-2109
chr1:197887210-197887436	chr1	+	197887255	197887327	True	NM_001014434,NM_001195216,NM_020204	chr1,chr1,chr1	+,-,+	LHX9,DENND1B,LHX9	-5671,-142632,-789
chr2:31620007-31620296	chr2	+	31620048	31620342	True	NM_014600,NM_000379	chr2,chr2	+,-	EHD3,XDH	-163221,17319
chr1:155275255-155276507	chr1	+	155275312	155276490	True	NM_001135822,NM_002004,NM_000298,NM_001135821,NM_181871	chr1,chr1,chr1,chr1,chr1	+,+,-,+,-	FDPS,FDPS,PKLR,FDPS,PKLR	2048,2048,-4087,2214,-4520
chr6:136210934-136211567	chr6	+	136211198	136211582	True	NM_001099286,NM_018945	chr6,chr6	-,+	FAM54A,PDE7B	359917,-38428
chr11:85429763-85429966	chr11	+	85429805	85429958	True	NM_001162952,NM_206927,NM_206928,NM_206929,NM_206930,NM_032379,NM_032273	chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,-,-,+	SYTL2,SYTL2,SYTL2,SYTL2,SYTL2,SYTL2,TMEM126A	482,7610,7610,295,482,-4014,-70906
chr16:84075346-84075561	chr16	+	84075401	84075511	True	NM_001080442,NM_019065	chr16,chr16	-,+	SLC38A8,NECAB2	301,-73215
chr7:23284846-23285988	chr7	+	23285061	23285819	True	NM_006547,NM_001005340,NM_002510	chr7,chr7,chr7	-,+,+	IGF2BP3,GPNMB,GPNMB	224226,496,496
chr22:30663404-30663796	chr22	+	30663499	30663745	True	NM_020530,NM_001017437	chr22,chr22	-,+	OSM,CCDC157	-670,88881
chr16:220702-221516	chr16	+	220866	221174	True	NM_001077350,NM_000558,NM_000517,NM_001003938,NM_005331	chr16,chr16,chr16,chr16,chr16	-,+,+,+,+	NPRL3,HBA1,HBA2,HBM,HBQ1	-32194,5504,1671,-4945,9158
chrX:151080923-151081282	chrX	+	151080924	151081072	True	NR_029973,NM_002362,NM_001011548,NM_001011549,NM_001011550	chrX,chrX,chrX,chrX,chrX	-,+,+,+,+	MIR452,MAGEA4,MAGEA4,MAGEA4,MAGEA4	47162,3636,288,4324,5687
chr1:13674475-13676071	chr1	+	13674661	13676084	True	NM_001099854,NM_001010890	chr1,chr1	-,+	PRAMEF14,PRAMEF9	-1150,-32739
chr1:13674475-13676071	chr1	-	12849928	12850213	False	NM_023013,NM_001146344	chr1,chr1	+,-	PRAMEF1,PRAMEF11	1332,41104
chr1:13674475-13676071	chr1	+	13453806	13455248	False	NM_001099854,NM_001024661,NM_001010890	chr1,chr1,chr1	-,-,+	PRAMEF14,PRAMEF13,PRAMEF9	-1150,-1150,-32681
chr6:116871061-116872610	chr6	+	116871392	116872543	True	NM_001007464,NM_001139444	chr6,chr6	+,-	RWDD1,BET3L	20039,-4619
chr4:84456672-84457282	chr4	+	84456677	84457055	True	NM_032717,NM_139076	chr4,chr4	+,-	AGPAT9,FAM175A	597,-50387
chr20:43513197-43513647	chr20	+	43513412	43513472	True	NM_139323,NM_003404,NM_182970	chr20,chr20,chr20	+,+,-	YWHAB,YWHAB,RIMS4	871,871,-74500
chr1:1309081-1309445	chr1	+	1309109	1309493	True	NM_001127230,NM_001127229,NM_017900,NR_015434	chr1,chr1,chr1,chr1	-,-,-,+	AURKAIP1,AURKAIP1,AURKAIP1,LOC148413	1119,1137,1375,25416
chr9:140092421-140092653	chr9	+	140092427	140092685	True	NM_003731,NM_013366,NM_001128228,NM_001144028,NM_001144026,NM_001144027,NM_053045,NM_014434	chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9	+,-,-,+,+,+,-,+	SSNA1,ANAPC2,TPRN,NDOR1,NDOR1,NDOR1,TMEM203,NDOR1	-9424,-9370,2528,7433,7433,7433,7455,7433
chr1:160232837-160233133	chr1	+	160232851	160233107	True	NR_028105,NR_028104,NR_028106,NR_028103,NR_002190,NM_015726	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,+,-	DCAF8,DCAF8,DCAF8,DCAF8,SUMO1P3,DCAF8	-533,-533,-574,-533,53947,-501
chr7:107196381-107197507	chr7	+	107196476	107197100	True	NM_001161520,NM_181733,NM_006348,NM_181581	chr7,chr7,chr7,chr7	-,-,-,+	COG5,COG5,COG5,DUS4L	7917,7917,7917,7331
chr13:25339450-25340085	chr13	+	25339479	25339880	True	NM_018451,NM_001184993,NM_031277	chr13,chr13,chr13	-,+,+	CENPJ,RNF17,RNF17	157262,-1241,-1241
chr5:179335912-179336811	chr5	+	179336034	179336646	True	NM_015043,NM_003900,NM_198868	chr5,chr5,chr5	-,+,-	TBC1D9B,SQSTM1,TBC1D9B	-1178,-88243,-1178
chrY:6343155-6344494	chrY	+	6343166	6344476	True	NR_001533,NR_003591,NR_003592	chrY,chrY,chrY	-,-,+	TTTY8,TTTY8B,TTTY7B	-1495,-1495,-25708
chrY:6343155-6344494	chrY	-	9525903	9527213	False	NR_001533,NR_003591,NR_001534	chrY,chrY,chrY	+,+,-	TTTY8,TTTY8B,TTTY7	1495,1495,25708
chr4:110479830-110480729	chr4	+	110480151	110480751	True	NM_017918,NM_001226	chr4,chr4	+,-	CCDC109B,CASP6	603,143932
chr19:18197338-18197708	chr19	+	18197374	18197448	True	NM_015016,NM_005535,NM_153701	chr19,chr19,chr19	+,-,-	MAST3,IL12RB1,IL12RB1	11154,299,299
chr2:189152428-189152999	chr2	+	189152574	189153039	True	NR_030287,NM_052952,NM_016315	chr2,chr2,chr2	+,-,+	MIR561,DIRC1,GULP1	9179,501843,4350
chr11:64795359-64796015	chr11	+	64795358	64795956	True	NM_013306,NM_147777,NM_005468	chr11,chr11,chr11	+,+,-	SNX15,SNX15,NAALADL1	-529,-529,30115
chr21:35832474-35833064	chr21	+	35832486	35832995	True	NM_001127670,NM_001127669,NM_001127668,NM_058182	chr21,chr21,chr21,chr21	-,-,-,+	KCNE1,KCNE1,KCNE1,FAM165B	-4423,-584,-584,-84788
chr19:49550637-49550943	chr19	+	49550765	49550857	True	NM_033183,NM_033142,NM_033043	chr19,chr19,chr19	-,-,+	CGB8,CGB7,CGB5	1561,8190,-3714
chr19:49550637-49550943	chr19	+	49526038	49526088	False	NM_000894,NM_000737,NM_033378,NR_024244	chr19,chr19,chr19,chr19	-,-,+,-	LHB,CGB,CGB2,SNAR-G2	-5691,1555,9041,9006
chr19:49550637-49550943	chr19	-	49548605	49548677	False	NR_004383,NM_033183,NM_033377,NM_033043	chr19,chr19,chr19,chr19	+,-,-,+	SNAR-G1,CGB8,CGB1,CGB5	-8379,3748,-8414,-1554
chr19:49550637-49550943	chr19	+	49538698	49538750	False	NR_004383,NM_033378,NM_033377,NR_024244,NM_033043	chr19,chr19,chr19,chr19,chr19	+,+,-,-,+	SNAR-G1,CGB2,CGB1,SNAR-G2,CGB5	1526,-3619,1491,-3654,8351
chr19:49550637-49550943	chr19	-	49536545	49536622	False	NR_024244,NM_033378,NM_033377,NR_004383,NM_000737	chr19,chr19,chr19,chr19,chr19	-,+,-,+,-	SNAR-G2,CGB2,CGB1,SNAR-G1,CGB	-1501,-1473,3619,3654,-8952
chr16:21701300-21702308	chr16	+	21701381	21701505	True	NM_001161683,NM_005849	chr16,chr16	+,-	OTOA,IGSF6	-5688,-37409
chr21:47516395-47517189	chr21	+	47516462	47516890	True	NM_001849,NM_058174,NM_058175,NM_006657	chr21,chr21,chr21,chr21	+,+,+,-	COL6A2,COL6A2,COL6A2,FTCD	1142,1142,1142,58641
chr15:89160995-89162841	chr15	+	89161015	89162648	True	NM_022767,NR_029606,NR_031590,NR_026645	chr15,chr15,chr15,chr15	+,+,+,-	AEN,MIR7-2,MIR1179,DET1	1878,-6010,-9728,-71103
chr16:1660151-1660416	chr16	+	1660222	1660442	True	NM_020825,NM_014714	chr16,chr16	+,-	CRAMP1L,IFT140	4198,1717
chr11:103908554-103908785	chr11	+	103908583	103908784	True	NM_025208,NM_001001711	chr11,chr11	-,+	PDGFD,DDI1	126294,-1326
chr11:44096164-44096532	chr11	+	44096164	44096238	True	NM_032592,NM_021926,NM_001127219	chr11,chr11,chr11	+,-,+	ACCS,ALX4,ACCS	-8403,235528,-8486
chr18:59863019-59863756	chr18	+	59863240	59863346	True	NM_176787,NM_020854,NM_012327	chr18,chr18,chr18	-,+,-	PIGN,KIAA1468,PIGN	-8951,-8780,-8951
chr12:29410814-29412203	chr12	+	29410891	29412201	True	NM_018099,NM_016570	chr12,chr12	+,-	FAR2,ERGIC2	-34353,121993
chr19:46916512-46916718	chr19	+	46916636	46916702	True	NM_006247,NM_032040	chr19,chr19	+,-	PPP5C,CCDC8	-66436,267
chr10:101769989-101771366	chr10	+	101770072	101771230	True	NM_015221,NR_024130	chr10,chr10	-,+	DNMBP,DNMBP-AS1	-396,-83157
chr2:91934808-91935370	chr2	+	91934899	91935360	True	NR_003503,NR_027238	chr2,chr2	+,-	GGT8P,LOC654342	28007,-86924
chr20:44656947-44657544	chr20	+	44657029	44657537	True	NM_001134771,NM_022095,NM_020708	chr20,chr20,chr20	+,-,+	SLC12A5,ZNF335,SLC12A5	-6751,-56196,283
chr4:46391446-46391927	chr4	+	46391463	46391783	True	NM_000807,NM_001114175,NM_000812	chr4,chr4,chr4	-,-,+	GABRA2,GABRA2,GABRB1	323,-67,641511
chrX:55247048-55248743	chrX	+	55247193	55248684	True	NM_001013435,NM_001190708,NM_130467	chrX,chrX,chrX	+,-,+	PAGE5,MTRNR2L10,PAGE5	-452,-38249,-453
chr19:22605159-22605929	chr19	+	22605205	22605826	True	NR_033899,NM_001098626	chr19,chr19	+,-	LOC440518,ZNF98	173232,-57
chr10:70091479-70091753	chr10	+	70091557	70091749	True	NM_001033083,NM_021644,NM_012207,NM_022129	chr10,chr10,chr10,chr10	-,+,+,-	PBLD,HNRNPH3,HNRNPH3,PBLD	985,18,18,985
chr6:166720294-166720508	chr6	+	166720497	166720557	True	NM_175922,NR_027284	chr6,chr6	-,+	PRR18,LOC441177	1364,-319509
chr18:59559229-59559594	chr18	+	59559389	59559631	True	NM_020854,NM_173557	chr18,chr18	+,-	KIAA1468,RNF152	294892,723
chr1:40202446-40204194	chr1	+	40202782	40203735	True	NM_203456,NR_036544,NM_001195007,NR_036543,NM_022120,NM_006112	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,-,+	PPIE,PPIE,PPIE,PPIE,OXCT2,PPIE	781,781,781,781,33340,781
chr15:25475679-25475938	chr15	+	25475678	25475970	True	NR_003353,NR_003358,NR_003352,NR_003497,NR_003351,NR_003344,NR_003345,NR_003346,NR_003347,NM_130838,NR_003303,NR_003348,NR_003349,NR_003350	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,-,+,+,+,+	SNORD115-38,SNORD115-43,SNORD115-37,HBII-52-28,SNORD115-36,SNORD115-29,SNORD115-30,SNORD115-31,SNORD115-32,UBE3A,SNORD115-11,SNORD115-33,SNORD115-34,SNORD115-35	9014,5261,7162,-8228,5261,5261,-5379,-3473,-1615,174733,5261,14,1563,3423
chr5:139557158-139558577	chr5	+	139557202	139558582	True	NM_002622,NM_032412	chr5,chr5	-,+	PFDN1,C5orf32	124157,-2600
chr12:31736584-31738228	chr12	+	31736720	31738173	True	NM_001135864,NM_144973	chr12,chr12	+,-	METTL20,DENND5B	61920,5829
chr10:128214066-128214972	chr10	+	128214140	128214794	True	NM_001004298,NM_001380	chr10,chr10	-,+	C10orf90,DOCK1	-4130,379228
chr13:73330823-73331862	chr13	+	73331081	73331396	True	NM_006346,NM_001128226	chr13,chr13	+,-	PIBF1,DIS3	24833,25003
chr8:17105053-17105790	chr8	+	17105068	17105659	True	NM_152415,NM_013354,NM_001145152,NM_054026	chr8,chr8,chr8,chr8	+,-,+,-	VPS37A,CNOT7,VPS37A,CNOT7	-718,-681,-718,-681
chr9:116163833-116164429	chr9	+	116163886	116164334	True	NR_027261,NM_017443,NM_152786,NM_000031	chr9,chr9,chr9,chr9	-,-,+,-	POLE3,POLE3,C9orf43,ALAD	8671,8745,8687,-268
chr5:141302667-141302904	chr5	+	141302707	141302925	True	NM_014773,NR_033244,NM_001142603	chr5,chr5,chr5	+,-,+	KIAA0141,LOC729080,KIAA0141	459,-26447,459
chrX:135741380-135743047	chrX	+	135741412	135743083	True	NM_004840,NM_000074	chrX,chrX	-,+	ARHGEF6,CD40LG	120470,-11127
chr2:128614464-128615350	chr2	+	128615096	128615296	True	NM_032740,NM_004805	chr2,chr2	+,-	SFT2D3,POLR2D	-156550,483
chr1:1210609-1210845	chr1	+	1210706	1210894	True	NR_037668,NM_194458,NM_194315,NM_194457,NM_001130413,NM_058167	chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,-,+,-	SCNN1D,UBE2J2,UBE2J2,UBE2J2,SCNN1D,UBE2J2	-119,-1472,-1472,-1472,-119,-1472
chr9:72661421-72662290	chr9	+	72661593	72662093	True	NM_153267,NM_001099666	chr9,chr9	+,-	MAMDC2,PTAR1	-3155,-286717
chr20:34334049-34335017	chr20	+	34334406	34334688	True	NM_184234,NM_004902,NM_016436	chr20,chr20,chr20	-,-,+	RBM39,RBM39,PHF20	-4213,-4213,25234
chr12:100560060-100560556	chr12	+	100560100	100560600	True	NR_036632,NR_024261,NR_031728	chr12,chr12,chr12	-,-,+	GOLGA2B,GOLGA2B,MIR1827	6571,6571,23061
chr1:1711528-1712019	chr1	+	1711536	1712006	True	NM_001198993,NR_002946,NM_023018,NM_001198994	chr1,chr1,chr1,chr1	-,+,-,-	NADK,MMP23A,NADK,NADK	-1239,-80209,-1627,-28
chr5:158688954-158689639	chr5	+	158689241	158689656	True	NM_001199380,NM_145049	chr5,chr5	-,+	RNF145,UBLCP1	-52180,432
chr2:175526148-175527858	chr2	+	175526419	175527626	True	NM_024583,NM_001077269	chr2,chr2	+,-	SCRN3,WIPF1	-266014,20062
chr16:3449145-3450715	chr16	+	3449282	3450454	True	NM_017810,NM_001032292,NM_003450	chr16,chr16,chr16	-,+,+	ZNF434,ZNF174,ZNF174	621,735,735
chr11:64526744-64527268	chr11	+	64526787	64527295	True	NM_006244,NM_001164716,NM_005609	chr11,chr11,chr11	+,-,-	PPP2R5B,PYGM,PYGM	164847,942,942
chr3:183352674-183353285	chr3	+	183352766	183353175	True	NM_130446,NM_017644	chr3,chr3	-,+	KLHL6,KLHL24	-79267,235
chr17:43717119-43718254	chr17_ctg5_hap1	-	1149175	1150462	False	NR_026901,NR_026906,NR_026905	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	+,-,-	LOC644172,C17orf69,C17orf69	37976,835,835
chr17:43717119-43718254	chr17	+	43717125	43718137	True	NR_026901,NR_026906,NR_026905	chr17,chr17,chr17	-,+,+	LOC644172,C17orf69,C17orf69	-37377,-835,-835
chr2:128282555-128283339	chr2	+	128282857	128283385	True	NM_017969,NM_001080527	chr2,chr2	-,+	IWS1,MYO7B	752,9992
chr16:89991234-89991714	chr16	+	89991477	89991659	True	NM_002386,NM_145039,NM_001197181,NM_006086	chr16,chr16,chr16,chr16	+,-,+,+	MC1R,CENPBD1,TUBB3,TUBB3	-7241,47631,-3111,-1841
chr6:35482028-35483928	chr6	+	35482043	35483885	True	NM_003322,NM_007104	chr6,chr6	-,+	TULP1,RPL10A	-1396,-45916
chr1:161495399-161495977	chr1	+	161495416	161495992	True	NM_000569,NM_002155	chr1,chr1	-,+	FCGR3A,HSPA6	23876,-1431
chr16:46722860-46723151	chr16	+	46722888	46723200	True	NM_014321,NR_037620,NM_018206	chr16,chr16,chr16	+,+,-	ORC6,ORC6,VPS35	357,357,-6
chr1:46865271-46866118	chr1	+	46865288	46865946	True	NM_001441,NM_006369	chr1,chr1	+,-	FAAH,LRRC41	-5400,-96250
chr2:132233782-132233982	chr2	+	132233899	132234023	True	NM_001085365,NM_080386	chr2,chr2	-,+	MZT2A,TUBA3D	16091,-284
chr13:50203760-50205035	chr13	+	50203798	50204854	True	NM_138450,NM_018191	chr13,chr13	+,-	ARL11,RCBTB1	-1423,-44079
chr9:135281708-135282207	chr9	+	135282149	135282245	True	NM_007344,NM_207417	chr9,chr9	-,+	TTF1,C9orf171	26,3365
chr19:44144713-44146266	chr19	+	44144970	44146142	True	NM_001145641,NM_145296	chr19,chr19	+,-	SRRM5,CADM4	-28768,-979
chr16:30386708-30387694	chr16	+	30387030	30387686	True	NM_013292,NM_015527,NM_052838	chr16,chr16,chr16	+,-,-	MYLPF,TBC1D10B,SEPT1	-958,-5508,6535
chr8:102381052-102381421	chr8	+	102381110	102381400	True	NM_016096,NR_002182	chr8,chr8	-,+	ZNF706,NACAP1	-163150,-40
chr3:112712989-112714542	chr3	+	112713486	112714324	True	NM_138940,NM_138485,NM_014170	chr3,chr3,chr3	-,+,+	CD200R1,GTPBP8,GTPBP8	-19549,-3744,-3744
chrX:151928372-151928590	chrX	+	151928379	151928613	True	NM_001129826,NM_005361,NM_175742,NM_005362,NM_001129828,NM_175743,NM_153488,NM_004909,NM_001080848	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,-,-,-,+,-,-,+,+	CSAG3,MAGEA2,MAGEA2,MAGEA3,CSAG3,MAGEA2,MAGEA2B,CSAG2,CSAG2	-619,-6015,-6015,9677,-696,-6015,-8280,-696,-696
chrX:151928372-151928590	chrX	-	151876867	151877101	False	NM_001129826,NM_005361,NM_175742,NM_005363,NM_001129828,NM_175743,NM_153488,NM_175868,NM_004909,NM_001080848	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,-,+,+,+,-,-	CSAG3,MAGEA2,MAGEA2,MAGEA6,CSAG3,MAGEA2,MAGEA2B,MAGEA6,CSAG2,CSAG2	619,6017,6017,-9673,696,6017,8282,-9673,696,696
chr3:98234847-98235541	chr3	+	98234939	98235559	True	NM_001040199,NM_005290,NM_001040182,NM_001040183,NM_001040181,NM_019895,NM_001040200	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-,-	CLDND1,GPR15,CLDND1,CLDND1,CLDND1,CLDND1,CLDND1	6401,15318,6401,6401,6401,6401,6401
chr6:167582124-167582498	chr6	+	167582145	167582375	True	NM_005299,NM_001145121	chr6,chr6	-,+	GPR31,TCP10L2	-10826,1705
chr6:167582124-167582498	chr6	-	167803000	167803230	False	NM_004610,NM_031949	chr6,chr6	-,+	TCP10,TTLL2	-5002,-64477
chr22:45895909-45896856	chr22	+	45896284	45896805	True	NM_001996,NM_006485,NM_006487,NM_006486,NM_148674	chr22,chr22,chr22,chr22,chr22	+,+,+,+,-	FBLN1,FBLN1,FBLN1,FBLN1,SMC1B	1913,1913,1913,1913,-86784
chr22:25347554-25348243	chr22	+	25347789	25348165	True	NM_001145206,NM_001001663	chr22,chr22	+,-	KIAA1671,TMEM211	75775,-12475
chr17:80314176-80314449	chr17	+	80314178	80314466	True	NM_003004,NM_207459	chr17,chr17	-,+	SECTM1,TEX19	-22257,2656
chr10:28288718-28288971	chr10	+	28288739	28288842	True	NM_021252,NM_018076	chr10,chr10	+,-	RAB18,ARMC4	-495554,-762
chr18:29522828-29523037	chr18	+	29522848	29523034	True	NM_014939,NM_017831	chr18,chr18	-,+	TRAPPC8,RNF125	107,75410
chrX:112072757-112074376	chrX	+	112072907	112074391	True	NM_133265,NM_001004308,NM_001113490	chrX,chrX,chrX	-,+,-	AMOT,ZCCHC16,AMOT	9702,-746705,-6553
chr22:18958492-18959832	chr22	+	18958535	18959643	True	NR_002733,NM_016335	chr22,chr22	+,-	DGCR5,PRODH	-559,-34469
chr3:182698659-182699025	chr3	+	182698659	182699074	True	NM_014616,NM_020640	chr3,chr3	+,-	ATP11B,DCUN1D1	-187419,-333
chr8:86351193-86351525	chr8	+	86351236	86351540	True	NM_005181,NM_001738	chr8,chr8	+,-	CA3,CA1	-239,-60894
chr6:76730874-76731379	chr6	+	76731051	76731416	True	NM_001563,NM_004999	chr6,chr6	-,+	IMPG1,MYO6	50976,-272193
chr16:87635208-87635573	chr16	+	87635241	87635503	True	NM_020655,NM_015144	chr16,chr16	+,-	JPH3,ZCCHC14	995,-109781
chr13:99226139-99226356	chr13	+	99226186	99226262	True	NM_001032296,NR_036129	chr13,chr13	-,+	STK24,MIR3170	3192,-365467
chr15:30336898-30337225	chr15	+	30336919	30337167	True	NR_026859,NM_175610	chr15,chr15	+,-	FAM7A3,TJP1	58767,-222213
chr12:76742922-76744889	chr12	+	76743113	76744899	True	NM_015336,NM_024685	chr12,chr12	+,-	ZDHHC17,BBS10	412954,-891
chr1:42618968-42619301	chr1	+	42619008	42619242	True	NM_007102,NM_033553	chr1,chr1	+,-	GUCA2B,GUCA2A	25,11203
chr11:64015263-64015840	chr11	+	64015469	64015831	True	NM_057092,NM_138689,NM_001184883,NM_004470,NM_000932,NM_001135208	chr11,chr11,chr11,chr11,chr11,chr11	+,-,+,+,+,+	FKBP2,PPP1R14B,PLCB3,FKBP2,PLCB3,FKBP2	-5933,-1056,3163,-7108,3163,-6917
chr19:13885787-13886753	chr19	+	13885910	13886743	True	NR_036515,NM_014047	chr19,chr19	-,+	LOC284454,C19orf53	60410,-704
chr22:30940158-30940740	chr22	+	30940270	30940714	True	NM_001193336,NM_000355	chr22,chr22	-,+	LOC730005,TCN2	2005,62355
chr10:106014254-106014530	chr10	+	106014287	106014559	True	NM_004832,NM_001191002,NM_001191003,NM_025145	chr10,chr10,chr10,chr10	+,+,+,-	GSTO1,GSTO1,GSTO1,WDR96	-82,-82,-386,-22167
chr10:99078245-99078655	chr10	+	99078563	99078703	True	NM_005479,NM_012083	chr10,chr10	+,-	FRAT1,FRAT2	318,15805
chr1:31457782-31458353	chr1	+	31457894	31458230	True	NR_002762,NR_003066	chr1,chr1	+,-	PRO0611,SNORD85	2681,-16810
chr10:124895939-124896174	chr10	+	124895945	124896223	True	NM_022466,NM_001105574	chr10,chr10	-,+	IKZF5,HMX3	-127634,-429
chr17:39745366-39745700	chr17	+	39745408	39745668	True	NM_005801,NM_000526	chr17,chr17	+,-	EIF1,KRT14	99458,-2261
chr9:117350222-117351410	chr9	+	117350388	117351346	True	NM_015404,NM_004888	chr9,chr9	-,+	DFNB31,ATP6V1G1	-82652,-445
chr17:72932966-72933364	chr17	+	72932966	72933425	True	NM_178233,NM_173477	chr17,chr17	+,-	OTOP3,USH1G	-1120,-13615
chr19:54041005-54041637	chr19	+	54041067	54041577	True	NM_001079906,NR_002938	chr19,chr19	+,-	ZNF331,LOC284379	103,65224
chr4:1895565-1897425	chr4	+	1895588	1897353	True	NM_007331,NM_012318,NM_133330,NM_133331,NM_133334,NM_133335	chr4,chr4,chr4,chr4,chr4,chr4	+,-,+,+,+,+	WHSC1,LETM1,WHSC1,WHSC1,WHSC1,WHSC1	-1130,-37614,-1130,-1130,4999,-1130
chr5:137901594-137902267	chr5	+	137901907	137902313	True	NM_001964,NR_002913,NM_004134	chr5,chr5,chr5	+,-,-	EGR1,SNORD63,HSPA9	-100788,-5108,9057
chr14:24522072-24522503	chr14	+	24522118	24522534	True	NM_138360,NM_006177	chr14,chr14	+,-	LRRC16B,NRL	-963,31348
chr22:20309165-20310674	chr22	+	20309464	20310488	True	NR_026919,NM_033257	chr22,chr22	+,-	LOC150197,DGCR6L	-115660,-1836
chr18:32920193-32921881	chr18	+	32920258	32921640	True	NR_024566,NM_006965	chr18,chr18	+,-	ZNF271,ZNF24	-50073,2836
chr11:57517703-57518615	chr11	+	57518229	57518605	True	NM_001145101,NM_170746	chr11,chr11	-,+	BTBD18,C11orf31	698,-9567
chr6:166399159-166399936	chr6	+	166399345	166399981	True	NR_026860,NR_026861,NR_027284	chr6,chr6,chr6	-,-,+	C6orf176,C6orf176,LOC441177	1596,1596,1057
chr17:59533999-59534405	chr17	+	59534035	59534361	True	NM_199290,NM_018488	chr17,chr17	-,+	NACA2,TBX4	134252,-279
chr6:111369264-111370434	chr6	+	111369638	111370165	True	NM_018593,NR_002932	chr6,chr6	+,-	SLC16A10,GSTM2P1	38615,-881
chr9:131799447-131800669	chr9	+	131799619	131800693	True	NM_020145,NM_032809	chr9,chr9	-,+	SH3GLB2,FAM73B	-9040,-417
chrX:128913986-128914520	chrX	+	128913992	128914502	True	NM_001008222,NM_018990	chrX,chrX	-,+	ZDHHC9,SASH3	63109,-151
chrY:15579954-15580275	chrY	+	15580213	15580282	True	NM_007125,NM_004202	chrY,chrY	-,+	UTY,TMSB4Y	12319,235164
chr6:108583283-108583992	chr6	+	108583384	108583760	True	NM_145315,NM_152827,NM_003795	chr6,chr6,chr6	+,-,-	LACE1,SNX3,SNX3	32337,-920,-920
chr7:16685087-16685579	chr7	+	16685184	16685641	True	NM_020319,NM_014038,NM_001159767,NR_027624	chr7,chr7,chr7,chr7	-,+,+,+	ANKMY2,BZW2,BZW2,BZW2	-22,117,117,117
chr5:126641434-126641878	chr5	+	126641437	126641927	True	NM_032446,NM_001164478	chr5,chr5	+,-	MEGF10,FLJ44606	-15044,-232253
chr14:89885116-89885357	chr14	+	89885138	89885363	True	NR_036500,NM_005197	chr14,chr14	+,-	LOC400236,FOXN3	-1491,-1684
chr9:34329211-34329543	chr9	+	34329303	34329535	True	NM_194313,NM_147172,NM_147173,NM_001161	chr9,chr9,chr9,chr9	-,+,+,+	KIF24,NUDT2,NUDT2,NUDT2	-105,-8,-8,-8
chr2:100720846-100721089	chr2	+	100720860	100721030	True	NM_001011717,NM_001025108	chr2,chr2	+,-	NMS,AFF3	365913,1065
chr2:100720846-100721089	chr2	-	110518279	110518351	False	NM_178584,NM_001037866	chr2,chr2	-,+	SEPT10,RGPD6	-146496,31983
chr2:100720846-100721089	chr2	+	111368288	111368360	False	NM_001142807,NM_032260	chr2,chr2	+,-	ACOXL,RGPD5	121789,-31979
chr14:41107729-41109713	chr14	+	41107729	41109528	True	NM_152447,NM_203301	chr14,chr14	+,-	LRFN5,FBXO33	967235,-1206025
chr9:82198383-82199478	chr9	+	82198572	82199514	True	NM_002072,NM_007005	chr9,chr9	-,+	GNAQ,TLE4	-1552353,-11752
chr2:69667707-69669500	chr2	+	69668032	69668874	True	NM_001002755,NM_001153,NM_001002757,NM_001002756,NM_015700	chr2,chr2,chr2,chr2,chr2	-,+,-,-,-	NFU1,ANXA4,NFU1,NFU1,NFU1	-3279,300252,-3279,-3279,-3279
chr5:68713620-68714845	chr5	+	68713992	68714681	True	NM_001015892,NM_001038603	chr5,chr5	-,+	TAF9,MARVELD2	-48152,-3115
chr17:258512-259898	chr17	+	259036	259920	True	NM_182705,NM_001013672	chr17,chr17	-,+	FAM101B,C17orf97	35861,197
chr4:154126479-154127679	chr4	+	154126727	154127571	True	NR_001562,NM_015271	chr4,chr4	-,+	ANXA2P1,TRIM2	102442,-1180
chr2:135207885-135208180	chr2	+	135207947	135208171	True	NM_030923,NR_024275	chr2,chr2	-,+	TMEM163,LOC151162	268450,-1038
chr19:44124152-44124517	chr19	+	44124216	44124486	True	NM_001145641,NM_182498	chr19,chr19	+,-	SRRM5,ZNF428	-8014,-202
chr13:25259767-25260006	chr13	+	25259826	25260024	True	NM_001185085,NM_006437,NM_001676	chr13,chr13,chr13	+,-,+	ATP12A,PARP4,ATP12A	-5328,-172878,-5328
chr17:33775915-33776148	chr17	+	33775919	33775981	True	NM_144682,NR_003037	chr17,chr17	-,+	SLFN13,SNORD7	-63,124694
chr8:92083084-92083667	chr8	+	92083121	92083592	True	NM_016023,NM_018710	chr8,chr8	+,-	OTUD6B,TMEM55A	-754,-29918
chr1:87171140-87171928	chr1	+	87171192	87171915	True	NM_016009,NM_004261	chr1,chr1	+,-	SH3GLB1,SEP15	-986,208243
chr2:197664508-197664768	chr2	+	197664516	197664682	True	NM_001080539,NM_012086	chr2,chr2	+,-	CCDC150,GTF3C3	-160211,-91
chr3:81801081-81802363	chr3	+	81801161	81802384	True	NM_001167674,NM_000158	chr3,chr3	+,-	CADM2,GBE1	3205748,8617
chr11:69634918-69635972	chr11	+	69634944	69635994	True	NM_005247,NM_053056	chr11,chr11	-,+	FGF3,CCND1	-752,-179122
chr17:65363630-65364594	chr17	+	65363718	65364320	True	NM_002816,NM_181671,NM_012417,NM_174871	chr17,chr17,chr17,chr17	-,+,+,-	PSMD12,PITPNC1,PITPNC1,PSMD12	-997,9603,9603,-997
chr9:136501655-136501874	chr9	+	136501667	136501807	True	NM_000787,NM_001080515	chr9,chr9	+,-	DBH,FAM163B	-233,-56299
chr2:202314709-202315060	chr2	+	202314709	202314840	True	NM_015049,NM_018571	chr2,chr2	-,+	TRAK2,STRADB	1542,1551
chr3:58421372-58423222	chr3	+	58421510	58422622	True	NR_033384,NM_001173468,NM_000925,NM_001128214	chr3,chr3,chr3,chr3	-,-,-,+	PDHB,PDHB,PDHB,KCTD6	-1944,-1931,-1931,55200
chr3:57204015-57204282	chr3	+	57204066	57204325	True	NM_012096,NM_017563	chr3,chr3	+,-	APPL1,IL17RD	57439,-4663
chr7:87102769-87104559	chr7	+	87103173	87104579	True	NM_000443,NM_021151,NM_018850,NM_018849	chr7,chr7,chr7,chr7	-,+,-,-	ABCB4,CROT,ABCB4,ABCB4	490,-128286,490,490
chr12:106975686-106975980	chr12	+	106975749	106976015	True	NM_006825,NM_213594	chr12,chr12	-,+	CKAP4,RFX4	-334036,1017
chr12:8974800-8975801	chr12	+	8974813	8975815	True	NM_144670,NM_002355	chr12,chr12	+,-	A2ML1,M6PR	-43,126487
chr5:16143676-16144480	chr5	+	16143705	16144513	True	NM_012304,NM_001102562	chr5,chr5	+,-	FBXL7,MARCH11	-643451,35434
chr7:37016621-37018042	chr7	+	37016756	37017961	True	NM_001039459,NM_130442,NM_018685	chr7,chr7,chr7	-,-,+	ELMO1,ELMO1,ANLN	6767,7823,-587375
chr5:6377442-6378330	chr5	+	6377456	6378253	True	NM_001145161,NM_032286	chr5,chr5	+,-	UBE2QL1,MED10	70482,436
chr6:41302614-41304398	chr6	+	41302655	41304438	True	NM_001199510,NM_004828,NM_001199509,NM_018643	chr6,chr6,chr6,chr6	+,+,+,-	NCR2,NCR2,NCR2,TREM1	-291,-291,-291,-48198
chr10:65929580-65930620	chr7	-	87514351	87514403	False	NM_006716,NM_018843	chr7,chr7	+,-	DBF4,SLC25A40	-8860,-8659
chr10:65929580-65930620	chr10	+	65929768	65930596	True	NM_032776,NM_001001330	chr10,chr10	-,+	JMJD1C,REEP3	-704046,-648703
chr1:223745954-223746182	chr1	+	223746010	223746098	True	NM_001146068,NM_001143962	chr1,chr1	+,-	CAPN2,CAPN8	143196,107388
chr1:223745954-223746182	chr9	+	138945540	138945594	False	NM_015597,NM_144653	chr9,chr9	+,-	GPSM1,NACC2	276337,41587
chr19:10700807-10702008	chr19	+	10700973	10701829	True	NM_001145056,NM_005498	chr19,chr19	+,-	SLC44A2,AP1M2	11291,-2982
chr16:28635028-28635229	chr16	+	28635039	28635103	True	NM_001199142,NM_177536	chr16,chr16	+,-	EIF3C,SULT1A1	64775,-173
chr1:27480629-27480873	chr1	+	27480653	27480909	True	NM_015023,NM_003047	chr1,chr1	+,-	WDTC1,SLC9A1	80097,592
chr5:95168915-95169402	chr5	+	95168974	95169231	True	NR_026936,NM_002064	chr5,chr5	+,-	C5orf27,GLRX	18704,-10397
chr19:18652730-18653710	chr19	+	18652964	18653584	True	NM_012181,NM_001171948	chr19,chr19	-,+	FKBP8,C19orf50	849,14987
chr15:101816794-101817390	chr15	+	101816801	101817066	True	NM_024652,NM_018445,NM_203472	chr15,chr15,chr15	+,-,-	LRRK1,SELS,SELS	-357392,686,686
chr12:6713997-6714953	chr12	+	6714040	6714978	True	NM_001273,NM_002046	chr12,chr12	-,+	CHD4,GAPDH	1629,-70434
chr2:10283265-10283603	chr2	+	10283307	10283573	True	NR_036222,NM_182626	chr2,chr2	-,+	MIR4261,C2orf48	49274,-1849
chr12:72089489-72090517	chr12	+	72089555	72090337	True	NM_018279,NM_144982	chr12,chr12	+,-	TMEM19,ZFC3H1	-9735,-31806
chr9:40791038-40791806	chr9	+	40791303	40791780	True	NR_026801,NM_033160	chr9,chr9	+,-	FAM74A3,ZNF658	-75830,382
chr9:40791038-40791806	chr9	+	39463701	39464055	False	NM_001040065,NR_003528	chr9,chr9	+,-	FAM75A2,LOC653501	-108053,527
chr9:40791038-40791806	chr9	+	41608719	41609073	False	NM_001113541,NR_003528	chr9,chr9	+,-	FAM75A5,LOC653501	-108091,527
chr7:30809009-30809615	chr7	+	30809089	30809510	True	NM_032222,NM_001202481	chr7,chr7	+,-	FAM188B,CRHR2	1522,-69370
chr10:88123948-88124260	chr10	+	88124059	88124259	True	NM_017551,NM_001030015	chr10,chr10	-,+	GRID1,OPN4	2041,290054
chr17:51834550-51835099	chr17	+	51834862	51835060	True	NM_032559,NR_027941	chr17,chr17	+,-	KIF2B,COX11	65178,1211054
chrX:149866038-149867025	chrX	+	149866058	149866858	True	NM_001184808,NM_003828	chrX,chrX	-,+	CD99L2,MTMR1	200489,-4241
chr12:13194324-13194792	chr12	+	13194327	13194842	True	NM_015987,NM_020853	chr12,chr12	-,+	HEBP1,KIAA1467	-41084,2472
chr17:7309251-7310012	chr17	+	7309307	7309901	True	NM_152766,NR_037719,NM_020795	chr17,chr17,chr17	-,-,+	C17orf61,C17orf61-PLSCR3,NLGN2	-1857,-1857,1600
chr15:41171456-41172749	chr15	+	41171794	41172581	True	NM_020857,NM_133639	chr15,chr15	+,-	VPS18,RHOV	14046,-5307
chr21:46875975-46876299	chr21	+	46876065	46876347	True	NM_130444,NR_027498,NM_030582	chr21,chr21,chr21	+,-,+	COL18A1,NCRNA00175,COL18A1	-692,-31080,-692
chr14:23748659-23750265	chr14	+	23749131	23750311	True	NM_004050,NM_020834	chr14,chr14	+,-	BCL2L2,HOMEZ	25659,5048
chr4:69084721-69086027	chr4	+	69084720	69085662	True	NR_015446,NM_001129907	chr4,chr4	+,-	FTLP10,TMPRSS11BNL	-36764,-922
chr2:54754899-54755652	chr2	+	54754905	54755701	True	NR_002229,NM_001003937	chr2,chr2	+,-	RPL23AP32,TSPYL6	657,-271496
chr17:80169570-80170082	chr17	+	80169655	80170061	True	NM_001042422,NM_198082	chr17,chr17	+,-	SLC16A3,CCDC57	16231,678
chr17:38519889-38520197	chr17	+	38519889	38520236	True	NM_001024809,NM_152219	chr17,chr17	+,-	RARA,GJD3	-21669,759
chr16:87636870-87637148	chr16	+	87636869	87637145	True	NM_020655,NM_015144	chr16,chr16	+,-	JPH3,ZCCHC14	-421,-111409
chr1:231004629-231004831	chr1	+	231004628	231004800	True	NM_032800,NM_001136494,NM_022786	chr1,chr1,chr1	-,-,+	C1orf198,C1orf198,ARV1	-326,585,110022
chr2:208491544-208491930	chr2	+	208491589	208491979	True	NM_145280,NM_001127395,NM_001142300	chr2,chr2,chr2	-,-,+	METTL21A,METTL21A,CCNYL1	-1893,-1616,84284
chr7:134476235-134477925	chr7	+	134476240	134477772	True	NM_001628,NM_033157	chr7,chr7	-,+	AKR1B1,CALD1	-332352,-12127
chr3:197479028-197480769	chr3	+	197479059	197480307	True	NM_032288,NM_001145642,NR_027840,NM_001011537	chr3,chr3,chr3,chr3	+,-,+,+	FYTTD1,KIAA0226,FYTTD1,FYTTD1	-2486,-2491,-1849,-2686
chr17:46805673-46805944	chr17	+	46805678	46805980	True	NR_036150,NR_024103,NM_032391,NM_006361	chr17,chr17,chr17,chr17	-,+,-,-	MIR3185,NCRNA00253,PRAC,HOXB13	-3841,-5187,-5796,181
chr6:75914878-75915169	chr6	+	75914882	75915214	True	NM_004370,NM_080645,NM_001100409	chr6,chr6,chr6	-,-,+	COL12A1,COL12A1,SENP6	459,459,396407
chr2:118585430-118586439	chr2	+	118586065	118586479	True	NM_019044,NM_006773	chr2,chr2	-,+	CCDC93,DDX18	185310,-13868
chr16:87983035-87983574	chr16	+	87983082	87983418	True	NM_001173541,NM_001173539,NM_017869,NM_079837,NM_001173540,NM_001739	chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,-	BANP,BANP,BANP,BANP,BANP,CA5A	1619,1619,1619,1619,1619,-12970
chr22:31553682-31554537	chr22	+	31553895	31554393	True	NR_024209,NR_037496,NM_001135825,NR_024211,NR_024210,NR_024212,NM_152267	chr22,chr22,chr22,chr22,chr22,chr22,chr22	+,-,+,+,+,+,+	RNF185,MIR3928,RNF185,RNF185,RNF185,RNF185,RNF185	1744,1762,1744,1744,1744,1744,1744
chr17:19881555-19881914	chr17	+	19881716	19881946	True	NM_007202,NM_152904	chr17,chr17	-,+	AKAP10,SPECC1	-587,108388
chr10:99275694-99276252	chr10	+	99275733	99276143	True	NM_022362,NM_024954	chr10,chr10	-,+	MMS19,UBTD1	-17367,-17023
chrY:16097904-16098122	chrY	+	16097969	16098047	True	NM_181880,NM_004679	chrY,chrY	-,-	VCY1B,VCY	391,395
chrY:16097904-16098122	chrY	-	16168442	16168520	False	NM_181880,NM_004679	chrY,chrY	+,+	VCY1B,VCY	-391,-395
chr1:43734915-43736344	chr1	+	43734934	43736240	True	NM_182517,NM_144626	chr1,chr1	-,+	C1orf210,TMEM125	15060,53
chr22:19167050-19167558	chr22	+	19167049	19167447	True	NM_053006,NM_005984,NR_033687	chr22,chr22,chr22	+,-,-	TSSK2,SLC25A1,SLC25A1	-48779,-748,-1015
chr18:66381341-66381731	chr18	+	66381341	66381757	True	NM_019022,NM_001093729	chr18,chr18	-,+	TMX3,CCDC102B	646,733
chr4:38870164-38870991	chr4	+	38870216	38870967	True	NM_006068,NM_138389,NR_030300,NR_033290	chr4,chr4,chr4,chr4	-,+,+,+	TLR6,FAM114A1,MIR574,FAM114A1	-11778,-914,-615,-914
chr22:23744293-23744616	chr22	+	23744372	23744569	True	NR_033408,NR_003950	chr22,chr22	+,-	FBXW4P1,ZDHHC8P1	-139469,280
chr20:62199794-62200089	chr20	+	62199877	62200057	True	NM_033405,NM_024059,NM_001037335	chr20,chr20,chr20	-,+,-	PRIC285,C20orf195,PRIC285	-770,-15555,5585
chr19:18507176-18507795	chr19	+	18507486	18507818	True	NM_145256,NR_036156	chr19,chr19	-,+	LRRC25,MIR3189	647,-10165
chr1:100713705-100714706	chr1	+	100713822	100714738	True	NM_001130841,NM_001918	chr1,chr1	+,-	RTCD1,DBT	16975,721
chr2:232375672-232376678	chr2	+	232375955	232376700	True	NR_024079,NM_152614	chr2,chr2	-,+	C2orf52,C2orf57	2400,80874
chr2:242835144-242835584	chr2	+	242835150	242835620	True	NM_173821,NM_005018	chr2,chr2	+,-	C2orf85,PDCD1	-23315,-34092
chr2:182560393-182561786	chr2	+	182560535	182561605	True	NM_002500,NM_001130445	chr2,chr2	-,+	NEUROD1,SSFA2	-15143,194866
chr6:90599635-90601328	chr6	+	90599730	90601300	True	NM_014611,NM_032602	chr6,chr6	-,+	MDN1,GJA10	-70288,2887
chr10:135053350-135053601	chr10	+	135053408	135053582	True	NR_030170,NM_014468,NM_003577	chr10,chr10,chr10	-,+,+	MIR202,VENTX,UTF1	7592,-2053,-9683
chrX:52511664-52511946	chrX	+	52511664	52511994	True	NM_133430,NR_033251,NR_033253,NM_001097596,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_020411,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,+,+,+,+,+,+,+,+,+,+	XAGE1D,XAGE1C,XAGE1A,XAGE1B,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1D,XAGE1C	23,-25,-25,23,-25,-25,-25,23,38,23,38,38,38,38,23
chrX:52511664-52511946	chrX	-	52533069	52533399	False	NM_133430,NR_033251,NR_033253,NM_001097596,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_020411,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,-,-,-,-,-,-,-,-,-,-	XAGE1D,XAGE1C,XAGE1A,XAGE1B,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1D,XAGE1C	-23,25,25,-23,25,25,25,-23,-38,-23,-38,-38,-38,-38,-23
chrX:52511664-52511946	chrX	-	52545963	52546293	False	NM_133430,NR_033251,NR_033253,NM_001097596,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_020411,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,-,-,-,-,-,-,-,-,-,-	XAGE1D,XAGE1C,XAGE1A,XAGE1B,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1D,XAGE1C	-23,25,25,-23,25,25,25,-23,-38,-23,-38,-38,-38,-38,-23
chrX:52511664-52511946	chrX	+	52238713	52239043	False	NM_133430,NR_033251,NR_033253,NM_001097596,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_020411,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,+,+,+,+,+,+,+,+,+,+	XAGE1D,XAGE1C,XAGE1A,XAGE1B,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1D,XAGE1C	23,-25,-25,23,-25,-25,-25,23,38,23,38,38,38,38,23
chrX:52511664-52511946	chrX	-	52260129	52260459	False	NM_133430,NR_033251,NR_033253,NM_001097596,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_020411,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,-,-,-,-,-,-,-,-,-,-	XAGE1D,XAGE1C,XAGE1A,XAGE1B,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1D,XAGE1C	-23,25,25,-23,25,25,25,-23,-38,-23,-38,-38,-38,-38,-23
chr11:107432947-107433222	chr11	+	107433036	107433267	True	NM_138775,NM_001130037	chr11,chr11	-,+	ALKBH8,ELMOD1	3247,28549
chr12:6809355-6809672	chr12	+	6809508	6809640	True	NM_001164094,NM_153685	chr12,chr12	+,-	COPS7A,C12orf53	23509,222
chr9:37119194-37120199	chr9	+	37119630	37120042	True	NM_016734,NM_032226	chr9,chr9	-,+	PAX5,ZCCHC7	-85154,426
chr14:90720937-90721241	chr14	+	90721206	90721290	True	NM_017970,NM_002802	chr14,chr14	-,+	C14orf102,PSMC1	77039,1603
chr11:85906222-85906532	chr11	+	85906337	85906555	True	NM_003797,NM_007166	chr11,chr11	+,-	EED,PICALM	49259,-126229
chr7:152136859-152137426	chr7	+	152137177	152137435	True	NR_002935,NM_170606	chr7,chr7	+,-	FABP5P3,MLL3	-3253,-4087
chr7:152136859-152137426	chr22	-	17078595	17078665	False	NM_014406,NR_001591	chr22,chr22	-,+	CCT8L2,psiTPTE22	-4895,4135
chr12:48153522-48154052	chr12	+	48153528	48154052	True	NM_001098532,NM_001098531,NM_006105,NM_017842	chr12,chr12,chr12,chr12	-,-,-,+	RAPGEF3,RAPGEF3,RAPGEF3,SLC48A1	-1347,-639,-1284,12914
chr10:121632592-121632794	chr10	+	121632597	121632735	True	NM_024834,NM_007190	chr10,chr10	-,+	MCMBP,SEC23IP	-203,19349
chrY:14858826-14859943	chrY	+	14859134	14859761	True	NM_004654,NR_033667	chrY,chrY	+,-	USP9Y,GYG2P1	-46025,-325745
chr8:47507367-47508640	chr8	+	47507399	47508592	True	NR_027013,NM_005195	chr8,chr8	+,-	NCRNA00293,CEBPD	243915,1142185
chrX:118602435-118602797	chrX	+	118602448	118602794	True	NM_001152,NR_028443	chrX,chrX	+,-	SLC25A5,LOC100303728	-136,339
chr1:39324224-39324836	chr1	+	39324384	39324796	True	NM_001136275,NM_022157	chr1,chr1	+,-	AKIRIN1,RRAGC	132119,594
chr9:77702834-77703113	chr9	+	77702901	77703015	True	NM_012383,NM_017881,NR_023352,NM_001127603	chr9,chr9,chr9,chr9	+,-,-,-	OSTF1,C9orf95,C9orf95,C9orf95	382,168,168,168
chr1:92414285-92414768	chr1	+	92414330	92414758	True	NM_207189,NM_001195684,NM_001726	chr1,chr1,chr1	+,-,+	BRDT,TGFBR3,BRDT	169,-42771,2950
chr6:167582526-167584415	chr6	+	167583430	167584462	True	NM_005299,NM_001145121	chr6,chr6	-,+	GPR31,TCP10L2	-12111,51
chr6:167582526-167584415	chr6	-	167797616	167798648	False	NM_004610,NM_031949	chr6,chr6	-,+	TCP10,TTLL2	-51,-59093
chr1:87252695-87254509	chr1	+	87253876	87254534	True	NM_016009,NM_004261	chr1,chr1	+,-	SH3GLB1,SEP15	-83671,125623
chr3:142683003-142683690	chr3	+	142683101	142683669	True	NM_001080415,NM_198504	chr3,chr3	+,-	U2SURP,PAQR9	36702,-923
chr13:48997188-48998478	chr13	+	48997341	48998532	True	NM_001162497,NM_000321,NM_001162498	chr13,chr13,chr13	-,+,-	LPAR6,RB1,LPAR6	2566,-119519,-9688
chr15:21930513-21931880	chr15	+	21930518	21931672	True	NR_015416,NR_027053	chr15,chr15	+,-	LOC727924,LOC646214	346359,9118
chr1:183442095-183443417	chr1	+	183442286	183443422	True	NM_201569,NM_201568,NM_173156,NM_001174061,NM_015039	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	SMG7,SMG7,SMG7,SMG7,NMNAT2	-833,-833,-833,-833,-54652
chr20:62739169-62740325	chr20	+	62739324	62740226	True	NM_001200019	chr20	+	OPRL1	-23006
chr4:1716297-1717145	chr4	+	1716367	1717059	True	NM_006527,NM_138385,NM_006342,NM_001127266	chr4,chr4,chr4,chr4	-,-,+,-	SLBP,TMEM129,TACC3,TMEM129	-2337,6075,6206,6075
chr16:76307113-76308912	chr16	+	76307679	76308473	True	NM_005548,NM_033401	chr16,chr16	-,+	KARS,CNTNAP4	-626094,2702
chr6:73326360-73327350	chr6	+	73326363	73327388	True	NM_019842,NM_001160132,NM_001160133,NM_001160130,NR_036244,NM_001160134	chr6,chr6,chr6,chr6,chr6,chr6	+,+,+,+,-,+	KCNQ5,KCNQ5,KCNQ5,KCNQ5,MIR4282,KCNQ5	4182,4182,4182,4182,350138,4182
chr20:53091595-53091940	chr20	+	53091621	53091910	True	NM_018431,NM_001128915	chr20,chr20	+,-	DOK5,CYP24A1	355,-301105
chr2:234831807-234832174	chr2	+	234831827	234832205	True	NM_024080,NR_024322	chr2,chr2	+,-	TRPM8,MSL3P1	-5847,-54772
chr4:10041621-10042919	chr4	+	10041738	10042896	True	NM_000798,NM_001001290	chr4,chr4	+,-	DRD5,SLC2A9	-258532,134
chr17:27945712-27945949	chr17	+	27945723	27945939	True	NM_032854,NM_152345	chr17,chr17	-,+	CORO6,ANKRD13B	2552,-25247
chr17:42439295-42439759	chr17	+	42439330	42439768	True	NM_198475,NM_002087	chr17,chr17	-,+	FAM171A2,GRN	1517,-16890
chr7:55934196-55935478	chr7	+	55934294	55935368	True	NM_182633,NM_207366	chr7,chr7	+,-	ZNF713,SEPT14	44962,-3812
chr14:96721049-96721436	chr14	+	96721091	96721467	True	NM_018036,NM_000710	chr14,chr14	-,+	ATG2B,BDKRB1	108261,1091
chr16:29303265-29303501	chr16	+	29303397	29303541	True	NR_002939,NM_001031827	chr16,chr16	+,-	RUNDC2C,BOLA2	-907,162794
chr14:74029904-74030221	chr14	+	74029964	74030031	True	NM_006821,NM_203309	chr14,chr14	+,-	ACOT2,HEATR4	5740,-4313
chr12:50356953-50357244	chr12	+	50357018	50357139	True	NR_026948,NM_001651,NM_001652	chr12,chr12,chr12	-,+,+	LOC283332,AQP5,AQP6	-51372,-1790,9480
chr12:31729309-31730364	chr12	+	31729469	31730266	True	NM_001135864,NM_144973	chr12,chr12	+,-	METTL20,DENND5B	69827,13744
chr21:43772534-43773134	chr21	+	43772623	43773003	True	NM_005423,NM_001001895	chr21,chr21	-,+	TFF2,UBASH3A	-1415,51015
chr11:128739547-128740516	chr11	+	128739556	128740450	True	NM_153765,NM_153764,NM_153767,NM_153766,NM_000890	chr11,chr11,chr11,chr11,chr11	-,-,-,-,+	KCNJ1,KCNJ1,KCNJ1,KCNJ1,KCNJ5	-2288,-2288,-2288,-2288,20862
chr16:83930794-83931289	chr16	+	83931034	83931325	True	NM_001080442,NM_012213	chr16,chr16	-,+	SLC38A8,MLYCD	144487,1404
chr1:152192056-152192368	chr1	+	152192062	152192332	True	NM_001009931,NM_178438	chr1,chr1	-,+	HRNR,LCE5A	4387,290987
chr11:72385199-72386035	chr11	+	72385672	72386072	True	NM_033388,NM_001146209,NM_002599	chr11,chr11,chr11	+,-,-	ATG16L2,PDE2A,PDE2A	139378,-5564,-178
chr11:34076264-34076801	chr11	+	34076283	34076700	True	NM_203364,NM_005574,NM_005898	chr11,chr11,chr11	+,-,+	CAPRIN1,LMO2,CAPRIN1	-3117,-162447,-3117
chr19:37062431-37064082	chr19	+	37062923	37064058	True	NM_020951,NM_032825	chr19,chr19	-,+	ZNF529,ZNF382	189,32162
chr8:134580720-134581460	chr8	+	134580858	134581478	True	NM_003033,NR_037944,NM_173344	chr8,chr8,chr8	-,+,-	ST3GAL1,WISP1,ST3GAL1	2755,-377628,2755
chr20:62738308-62738878	chr20	+	62738334	62738852	True	NM_001200019	chr20	+	OPRL1	-22016
chr6:151772792-151773074	chr6	+	151772829	151773037	True	NM_017909,NM_024573	chr6,chr6	-,+	RMND1,C6orf211	329,384
chr1:202898165-202899177	chr1	+	202898250	202898777	True	NR_002929,NM_021633	chr1,chr1	+,-	LOC148709,KLHL12	-67424,-1879
chr11:70242091-70242302	chr11	+	70242090	70242194	True	NM_133266,NM_138565,NM_005231,NM_001184740	chr11,chr11,chr11,chr11	-,+,+,+	SHANK2,CTTN,CTTN,CTTN	265779,2417,2417,2417
chr17:5095541-5095809	chr17	+	5095747	5095847	True	NM_032530,NR_034082	chr17,chr17	-,+	ZNF594,LOC100130950	-569,-432
chr17:7348368-7348619	chr17	+	7348387	7348659	True	NM_004112,NM_001128833,NM_178518,NM_000747	chr17,chr17,chr17,chr17	+,-,+,+	FGF11,ZBTB4,TMEM102,CHRNB1	-5749,34335,-9676,-32
chr10:121573821-121574536	chr10	+	121573945	121574293	True	NM_024834,NR_003252	chr10,chr10	-,+	MCMBP,INPP5F	58151,4492
chr1:149403193-149403523	chr1	+	149403195	149403561	True	NR_027484,NM_001024599	chr1,chr1	+,-	FCGR1C,HIST2H2BF	-33953,-3966
chr1:149403193-149403523	chr1	+	149787936	149787986	False	NM_001024599,NM_001161334,NM_001123375,NM_001034077	chr1,chr1,chr1,chr1	-,-,-,+	HIST2H2BF,HIST2H2BF,HIST2H3D,HIST2H4B	-4008,-4008,-2700,16234
chr1:149403193-149403523	chr1	-	120901651	120901973	False	NR_027337,NM_001004340	chr1,chr1	+,-	HIST2H2BA,FCGR1B	4060,34021
chr8:33370635-33371351	chr8	+	33370660	33371250	True	NM_001102401,NM_025115,NM_032509	chr8,chr8,chr8	-,-,+	C8orf41,C8orf41,MAK16	19,-4,-28026
chr22:20462975-20463968	chr22	+	20462983	20463832	True	NM_015672,NR_026919	chr22,chr22	-,+	RIMBP3,LOC150197	-1197,-269181
chr22:20462975-20463968	chr22	-	21735739	21736478	False	NM_001128635,NR_003700,NM_001128633	chr22,chr22,chr22	+,-,+	RIMBP3B,PI4KAP2,RIMBP3C	1561,135354,1184
chr22:20462975-20463968	chr22	+	21906944	21907815	False	NM_001128635,NM_003347,NM_001128633	chr22,chr22,chr22	-,+,-	RIMBP3B,UBE2L3,RIMBP3C	-1571,14141,-1194
chr1:1932549-1933058	chr1	+	1932664	1932742	True	NM_000815,NM_001080484	chr1,chr1	+,-	GABRD,KIAA1751	18025,2588
chr11:59809246-59810536	chr11	+	59809651	59810292	True	NM_152851,NM_173801	chr11,chr11	-,+	MS4A6A,PLAC1L	140443,-1955
chr7:100772792-100773692	chr7	+	100773470	100773680	True	NM_003378,NM_001165413,NM_000602	chr7,chr7,chr7	-,+,+	VGF,SERPINE1,SERPINE1	35222,-3145,-3145
chr22:38450827-38451201	chr22	+	38451015	38451227	True	NM_013356,NM_001039584,NM_012407,NM_001039583	chr22,chr22,chr22,chr22	-,+,+,+	SLC16A8,PICK1,PICK1,PICK1	27993,2034,2034,2034
chr19:3507036-3507549	chr19	+	3507089	3507522	True	NM_031304,NM_016263,NM_001145165	chr19,chr19,chr19	-,+,-	DOHH,FZR1,DOHH	-6468,-845,-6151
chr6:53919039-53919977	chr6	+	53919052	53919663	True	NM_138569,NM_001003760	chr6,chr6	+,-	C6orf142,KLHL31	-35390,-388546
chr3:10549688-10551081	chr3	+	10549763	10550942	True	NM_001683,NR_024146,NM_001001331	chr3,chr3,chr3	-,+,-	ATP2B2,GHRLOS,ATP2B2	-2495,-222376,-2495
chr7:150866011-150866513	chr7	+	150866081	150866511	True	NM_001098834,NM_019015	chr7,chr7	-,+	GBX1,CHPF2	-1214,63073
chr3:150436481-150436731	chr3	+	150436519	150436610	True	NM_016275,NM_152394	chr3,chr3	+,-	SELT,FAM194A	-115510,-14777
chr20:1450148-1450462	chr20	+	1450278	1450494	True	NM_182483,NM_016143,NM_014723,NM_018839	chr20,chr20,chr20,chr20	-,-,+,-	NSFL1C,NSFL1C,SNPH,NSFL1C	-1861,-1861,-203369,-1861
chr14:23339323-23339616	chr14	+	23339430	23339494	True	NM_001077351,NM_014045	chr14,chr14	-,+	RBM23,LRP10	48956,1465
chr13:103722488-103724252	chr13	+	103722655	103724091	True	NR_026965,NM_000452	chr13,chr13	+,-	LOC121952,SLC10A2	-190270,-3459
chr12:110841523-110842715	chr12	+	110841588	110842360	True	NM_001137664,NM_016238,NM_013300	chr12,chr12,chr12	-,-,+	ANAPC7,ANAPC7,C12orf24	-53,-53,63871
chr2:170580668-170581298	chr2	+	170580804	170581065	True	NM_001085447,NM_144711	chr2,chr2	-,+	C2orf77,KLHL23	-29873,9290
chr22:29278161-29278782	chr22	+	29278228	29278744	True	NM_005080,NM_032173	chr22,chr22	-,+	XBP1,ZNRF3	-81668,1145
chr9:35824837-35826205	chr9	+	35825137	35826203	True	NM_001042589,NM_001012446,NM_001042590,NM_016446	chr9,chr9,chr9,chr9	+,-,+,+	TMEM8B,C9orf128,TMEM8B,TMEM8B	3025,2591,3309,3018
chr1:110524618-110525834	chr1	+	110524772	110525689	True	NM_006621,NM_006492	chr1,chr1	+,-	AHCYL1,ALX3	1618,87685
chr7:105609699-105611272	chr7	+	105609863	105611318	True	NM_152750,NM_152749	chr7,chr7	+,-	CDHR3,ATXN7L1	-6258,-92832
chr22:39885381-39885689	chr22	+	39885405	39885720	True	NM_001098270,NM_194326	chr22,chr22	+,-	MGAT3,RPS19BP1	-2227,43190
chr1:109935658-109937140	chr1	+	109935664	109937178	True	NM_001040709,NM_002959,NM_001205228	chr1,chr1,chr1	+,-,-	SYPL2,SORT1,SORT1	71921,3436,157
chr1:169704601-169706176	chr1	+	169704787	169706042	True	NM_000450,NM_018186	chr1,chr1	-,+	SELE,C1orf112	-1567,58507
chr12:23723218-23723699	chr12	+	23723274	23723389	True	NR_030625,NM_178010	chr12,chr12	+,-	MIR920,SOX5	641965,14180
chr10:60029569-60030890	chr10	+	60029607	60030633	True	NM_152230,NM_018464	chr10,chr10	-,+	IPMK,CISD1	-1913,-763
chr19:36231666-36231924	chr19	+	36231716	36231934	True	NM_024660,NM_144987,NM_172341,NM_001040425,NM_019104	chr19,chr19,chr19,chr19,chr19	-,-,+,-,+	IGFLR1,U2AF1L4,PSENEN,U2AF1L4,LIN37	1467,4452,4559,4452,7577
chr10:93668608-93669227	chr10	+	93668720	93669262	True	NM_003972,NM_152429	chr10,chr10	+,-	BTAF1,FGFBP3	14473,46
chr19:48673523-48673899	chr19	+	48673529	48673831	True	NM_000234,NM_153608	chr19,chr19	-,+	LIG1,ZNF114	5,100822
chr16:14407723-14407946	chr16	+	14407723	14407787	True	NR_029854,NM_001134477,NR_030177	chr16,chr16,chr16	+,-,+	MIR365-1,PARN,MIR193B	-4632,316383,-9950
chr17:5183099-5183903	chr17	+	5183214	5183478	True	NM_207103,NM_004703,NM_001083585	chr17,chr17,chr17	-,+,+	C17orf87,RABEP1,RABEP1	-45131,2079,2079
chr1:24883087-24884004	chr1	+	24883087	24884043	True	NM_001199012,NM_001010980	chr1,chr1	-,+	C1orf201,C1orf130	-141500,-571
chr19:41099988-41100339	chr19	+	41100036	41100290	True	NM_001042544,NM_003573,NM_004756,NM_001042545	chr19,chr19,chr19,chr19	+,+,-,+	LTBP4,LTBP4,NUMBL,LTBP4	2850,-1023,96316,6986
chr19:56738075-56739627	chr19	+	56738170	56739489	True	NM_024303,NM_033106	chr19,chr19	-,+	ZSCAN5A,GALP	227,-50832
chr17:75082684-75082925	chr17	+	75082688	75082880	True	NM_001204408,NR_036200,NM_001204410,NR_027058,NR_003013	chr17,chr17,chr17,chr17,chr17	+,-,+,+,+	SEC14L1,MIR4316,SEC14L1,C17orf86,SCARNA16	1844,310306,2354,1844,2508
chr7:158499767-158500019	chr7	+	158499788	158500008	True	NM_017760,NM_018051	chr7,chr7	-,+	NCAPG2,WDR60	-2268,149260
chr16:57280570-57281311	chr16	+	57280821	57281261	True	NM_015993,NM_012106	chr16,chr16	-,+	PLLP,ARL2BP	37373,-1841
chr10:82297613-82297984	chr10	+	82297616	82297954	True	NM_207372,NM_138812,NM_001145719	chr10,chr10,chr10	+,-,+	SH2D4B,DYDC1,SH2D4B	-10,-181116,2620
chr14:36984597-36985474	chr14	+	36984690	36985511	True	NM_003317,NM_006194,NM_001101341,NM_001079668	chr14,chr14,chr14,chr14	-,+,-,-	NKX2-1,PAX9,SFTA3,NKX2-1	3443,141261,-1700,3970
chr1:24516410-24517128	chr1	+	24516420	24517063	True	NM_170743,NM_173064,NM_173065,NR_027087	chr1,chr1,chr1,chr1	-,-,-,+	IL28RA,IL28RA,IL28RA,LOC284632	-2655,-2655,-2655,9666
chr14:74557331-74558832	chr14	+	74557493	74558654	True	NM_005589,NM_001024674	chr14,chr14	-,+	ALDH6A1,LIN52	-6297,-5888
chr8:38032689-38033126	chr8	+	38032898	38033167	True	NM_001204878,NM_004874,NM_014462	chr8,chr8,chr8	+,+,-	BAG4,BAG4,LSM1	938,938,910
chr10:123688195-123688418	chr10	+	123688296	123688447	True	NM_001001976,NM_206861,NM_007041	chr10,chr10,chr10	-,+,-	ATE1,TACC2,ATE1	-750,60241,-750
chr11:67479220-67479572	chr11	+	67479292	67479354	True	NM_007103,NM_001031615	chr11,chr11	+,-	NDUFV1,ALDH3B2	-105020,-30607
chr5:177661688-177662122	chr5	+	177661694	177661952	True	NM_153373,NM_031266	chr5,chr5	-,+	AGXT2L2,HNRNPAB	-1891,-30244
chr2:106464860-106466364	chr2	+	106464925	106466389	True	NM_025076,NM_001004720	chr2,chr2	-,+	UXS1,NCK2	344456,1814
chr3:119013676-119014119	chr3	+	119013735	119014119	True	NM_212543,NM_020754	chr3,chr3	-,+	B4GALT4,ARHGAP31	-53983,-566
chr5:35624897-35626028	chr5	+	35625023	35626048	True	NM_024867,NM_001042625,NM_144722	chr5,chr5,chr5	+,-,+	SPEF2,CAPSL,SPEF2	-7092,312741,-7092
chr11:122756748-122757199	chr11	+	122756751	122757173	True	NM_024806,NM_001098169,NM_199124	chr11,chr11,chr11	+,-,+	C11orf63,BSX,C11orf63	-3329,95256,-3329
chr3:187456740-187457093	chr3	+	187456744	187457064	True	NM_001134738,NM_001130845,NM_001706,NR_034062	chr3,chr3,chr3,chr3	-,-,-,+	BCL6,BCL6,BCL6,LOC100131635	-4049,-2459,6500,-36641
chr16:2015972-2016365	chr16	+	2015972	2016034	True	NR_003142,NM_174903,NM_002952,NR_002327,NR_002326,NM_006453,NR_003020,NM_004548	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,-,-,-,+,+,+	SNHG9,RNF151,RPS2,SNORA10,SNORA64,TBL3,SNORA78,NDUFB10	-1026,840,-1145,-3505,-2865,6029,-838,-6506
chr19:10674743-10675553	chr19	+	10675281	10675462	True	NM_023008,NM_079421,NR_031603,NM_001800	chr19,chr19,chr19,chr19	-,-,+,-	KRI1,CDKN2D,MIR1238,CDKN2D	1291,4244,-12535,4220
chr9:140115801-140116038	chr9	+	140115830	140116060	True	NM_001190228,NM_080877,NM_001177316,NM_001177317,NM_031297,NM_199001	chr9,chr9,chr9,chr9,chr9,chr9	+,+,+,+,-,+	LOC643596,SLC34A3,SLC34A3,SLC34A3,RNF208,C9orf169	5957,9324,9148,9148,-55,3583
chr20:23966549-23967151	chr20	+	23966752	23966816	True	NM_178312,NM_178311,NR_001279	chr20,chr20,chr20	-,-,+	GGTLC1,GGTLC1,CSTT	746,2650,-467020
chr20:52682025-52682702	chr20	+	52682088	52682559	True	NM_003657,NM_002623	chr20,chr20	-,+	BCAS1,PFDN4	4796,141942
chr12:88975421-88976057	chr12	+	88975423	88975722	True	NM_003994,NM_000899,NM_181783	chr12,chr12,chr12	-,-,+	KITLG,KITLG,TMTC3	-1173,-1173,-439408
chr11:60638338-60638624	chr11	+	60638433	60638599	True	NM_004778,NM_207341	chr11,chr11	-,+	GPR44,ZP1	-14989,-3469
chr19:5903611-5903836	chr19	+	5903682	5903866	True	NR_034166,NM_175614,NM_001017921,NM_001193375	chr19,chr19,chr19,chr19	-,-,+,-	NDUFA11,NDUFA11,VMAC,NDUFA11	208,208,985,208
chr2:26467943-26468362	chr2	+	26467986	26468384	True	NM_000182,NM_000183	chr2,chr2	-,+	HADHA,HADHB	-392,-421
chr17:33416860-33417504	chr17	+	33416873	33417289	True	NM_017559,NR_037713	chr17,chr17	+,-	FNDC8,RFFL	31341,-525
chr19:40006725-40007426	chr19	+	40006784	40007218	True	NM_152361,NM_182704	chr19,chr19	-,+	EID2B,SELV	16326,-1082
chr1:120848864-120850323	chr1	+	120849035	120849853	True	NM_001004340,NM_001100910	chr1,chr1	-,+	FCGR1B,FAM72B	86151,-10093
chr1:120848864-120850323	chr1	+	206148495	206149313	False	NM_001123168,NM_001007544	chr1,chr1	+,-	FAM72A,C1orf186	-9647,139394
chr1:120848864-120850323	chr1	-	143902280	143903098	False	NM_207418,NR_034178	chr1,chr1	-,+	FAM72D,SRGAP2P2	10107,12649
chr1:120848864-120850323	chr1	-	149455692	149456394	False	NR_027484,NM_001024599	chr1,chr1	+,-	FCGR1C,HIST2H2BF	-86459,-56463
chr5:153856348-153856606	chr5	+	153856351	153856632	True	NM_004821,NR_024084	chr5,chr5	-,+	HAND1,SAP30L	1243,-30885
chr16:3287456-3287800	chr16	+	3287653	3287773	True	NR_002169,NM_003454,NM_001145447,NM_001145446,NM_198087,NM_001145448,NM_198088	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,-,-,-,-	OR1F2P,ZNF200,ZNF200,ZNF200,ZNF200,ZNF200,ZNF200	-22145,-2467,-2467,-2196,-2196,-2197,-2197
chr1:32573868-32574068	chr1	+	32573880	32574108	True	NM_012316,NM_019118	chr1,chr1	+,-	KPNA6,TMEM234	-287,113868
chr2:220409037-220409281	chr2	+	220409091	220409321	True	NR_036082,NM_024536,NM_001195731,NM_001005209	chr2,chr2,chr2,chr2	-,-,-,+	MIR3132,CHPF,CHPF,TMEM198	4598,-604,-1272,-397
chr19:51294104-51294970	chr19	+	51294294	51294798	True	NR_003068,NM_033068,NR_003067	chr19,chr19,chr19	-,+,-	SNORD88B,ACPT,SNORD88A	7634,-673,8044
chr1:180165716-180166404	chr1	+	180165818	180166376	True	NR_037642,NR_026900	chr1,chr1	-,+	LOC100527964,FLJ23867	77490,767
chr5:42756902-42757472	chr5	+	42756986	42757346	True	NM_001134848,NM_001085486	chr5,chr5	+,-	CCDC152,SEPP1	-118,54728
chr16:71878672-71879036	chr16	+	71878739	71879035	True	NM_001128,NM_001137675,NR_024612	chr16,chr16,chr16	-,+,+	AP1G1,ATXN1L,ATXN1L	-35763,863,863
chr21:45581456-45582104	chr21	+	45581754	45581862	True	NM_198155,NM_015259	chr21,chr21	+,-	C21orf33,ICOSLG	-28311,79022
chr7:65958066-65958557	chr7	+	65958192	65958580	True	NM_001167961,NR_002933	chr7,chr7	+,-	KCTD7,LOC493754	135287,84968
chr10:97420003-97421045	chr10	+	97420002	97421042	True	NM_001098175,NM_001017423,NM_002860	chr10,chr10,chr10	+,-,-	ENTPD1,ALDH18A1,ALDH18A1	50493,-3435,-3435
chr2:143658419-143659080	chr2	+	143658513	143659051	True	NM_018557,NM_003937	chr2,chr2	-,+	LRP1B,KYNU	-769243,-23369
chr11:47579196-47579706	chr11	+	47579233	47579751	True	NM_001143984,NM_175732,NM_006560	chr11,chr11,chr11	+,+,-	PTPMT1,PTPMT1,CELF1	7230,7230,-4441
chr1:157773776-157774942	chr1	+	157773805	157774584	True	NM_001159397,NM_018240	chr1,chr1	-,+	FCRL1,KIRREL	15415,188478
chr17:16892247-16894051	chr17	+	16892253	16893877	True	NM_015134,NM_012452	chr17,chr17	+,-	MPRIP,TNFRSF13B	52229,-16851
chr2:215960472-215961590	chr2	+	215960499	215961609	True	NM_173076,NM_004044	chr2,chr2	-,+	ABCA12,ATIC	41598,215069
chr15:49254408-49254790	chr15	+	49254415	49254813	True	NM_014335,NM_203349	chr15,chr15	+,-	EID1,SHC4	-84176,878
chr6:143414960-143415645	chr6	+	143414985	143415655	True	NM_016108,NM_006734	chr6,chr6	+,-	AIG1,HIVEP2	-33013,-148647
chr12:133289775-133290384	chr12	+	133289839	133290241	True	NM_001170544,NM_001170543,NM_138575,NM_006231	chr12,chr12,chr12,chr12	+,+,+,-	PGAM5,PGAM5,PGAM5,POLE	-2497,-2497,-2497,-25894
chr6:34101234-34101493	chr6	+	34101254	34101482	True	NM_002131,NM_000841	chr6,chr6	+,-	HMGA1,GRM4	103094,11
chr4:152081360-152082410	chr4	+	152081527	152082244	True	NR_000007,NM_001128924	chr4,chr4	+,-	SNORD73A,SH3D19	-56612,14511
chr16:61087777-61088116	chr16	+	61087818	61088099	True	NM_001796,NM_024860	chr16,chr16	-,+	CDH8,SETD6	982691,-2538486
chr3:155589264-155589493	chr3	+	155589348	155589535	True	NM_003875,NM_004733	chr3,chr3	+,-	GMPS,SLC33A1	-1074,-17100
chrY:2708201-2708714	chrY	+	2708200	2708560	True	NM_003140,NM_001008	chrY,chrY	-,+	SRY,RPS4Y1	-52408,1062
chr3:138045434-138045852	chr3	+	138045563	138045697	True	NM_012219,NM_178130	chr3,chr3	+,-	MRAS,TXNDC6	20927,3087
chr11:8285734-8286262	chr11	+	8285742	8286154	True	NM_002315,NM_177972	chr11,chr11	-,+	LMO1,TUB	-336,-182884
chr10:121301420-121301673	chr10	+	121301497	121301571	True	NM_001005339,NM_004281,NM_002925	chr10,chr10,chr10	-,+,-	RGS10,BAG3,RGS10	701,109310,-5452
chr5:140262294-140262570	chr5	+	140262297	140262619	True	NM_031865,NM_031864,NM_002109,NM_018903,NM_018904	chr5,chr5,chr5,chr5,chr5	+,+,-,+,+	PCDHA13,PCDHA12,HARS,PCDHA12,PCDHA13	-494,-7417,-191326,-7417,-494
chr4:57302642-57302880	chr4	+	57302771	57302889	True	NM_001079524,NM_001079525,NM_006452,NM_002703	chr4,chr4,chr4,chr4	+,+,+,-	PAICS,PAICS,PAICS,PPAT	-559,-559,-913,-969
chr19:40793431-40795038	chr19	+	40794263	40794844	True	NM_001031696,NR_030371,NM_001626	chr19,chr19,chr19	+,-,-	PLD3,MIR641,AKT2	59487,-5715,-2998
chr3:182821950-182822852	chr3	+	182822195	182822760	True	NM_020166,NM_032047	chr3,chr3	-,+	MCCC1,B3GNT5	-4830,148271
chr1:45480505-45480812	chr1	+	45480560	45480831	True	NM_000374,NM_024602,NR_036510	chr1,chr1,chr1	+,-,+	UROD,HECTD3,UROD	-2806,-3533,-2806
chr6:44184702-44186647	chr6	+	44184787	44186425	True	NM_004955,NM_178148,NM_001078174,NM_001078175,NM_001078176,NM_001078177	chr6,chr6,chr6,chr6,chr6,chr6	+,-,+,+,+,+	SLC29A1,SLC35B2,SLC29A1,SLC29A1,SLC29A1,SLC29A1	816,38910,816,4870,4870,4937
chr17:39597599-39598428	chr17	+	39597665	39598441	True	NM_030975,NM_006771	chr17,chr17	+,-	KRTAP9-9,KRT38	-186081,-69
chr7:4167089-4167367	chr7	+	4167092	4167404	True	NM_020144,NR_027816	chr7,chr7	-,+	PAPOLB,SDK1	734271,1912
chr4:6643256-6643727	chr4	+	6643301	6643746	True	NM_033296,NM_203462	chr4,chr4	+,-	MRFAP1,MRFAP1L1	-907,67910
chr14:20790872-20791807	chr14	+	20791218	20791813	True	NM_182851,NM_182852,NM_001042618,NM_182849,NR_003693,NM_021178	chr14,chr14,chr14,chr14,chr14,chr14	-,-,+,-,-,-	CCNB1IP1,CCNB1IP1,PARP2,CCNB1IP1,SNORD126,CCNB1IP1	5780,5777,19959,9701,2942,9701
chr12:113587935-113588196	chr12	+	113587935	113588196	True	NM_004658,NM_001144872	chr12,chr12	-,+	RASAL1,CCDC42B	-13891,-331
chr7:5603224-5603433	chr7	+	5603227	5603421	True	NM_001101,NM_003088	chr7,chr7	-,+	ACTB,FSCN1	-32995,29032
chrX:52735968-52736343	chrX	+	52736008	52736370	True	NM_003147,NM_175698,NM_001164417	chrX,chrX,chrX	-,-,-	SSX2,SSX2,SSX2B	-71,-71,-71
chrX:52735968-52736343	chrX	-	52780186	52780548	False	NM_003147,NM_175698,NM_001164417	chrX,chrX,chrX	+,+,+	SSX2,SSX2,SSX2B	71,71,71
chr19:48108822-48109170	chr19	+	48109024	48109089	True	NM_015711,NM_001101419	chr19,chr19	+,-	GLTSCR1,ZNF541	2363,-49911
chr7:94023155-94023464	chr7	+	94023183	94023479	True	NM_001099400,NM_000089	chr7,chr7	-,+	SGCE,COL1A2	262092,393
chr5:172443675-172444133	chr5	+	172443706	172444088	True	NR_002988,NR_026682	chr5,chr5	+,-	SNORA74B,LOC100268168	3640,-57335
chr6:88049517-88050337	chr6	+	88049562	88050380	True	NM_001010868,NM_198568	chr6,chr6	+,-	C6orf163,GJB7	4190,-10566
chr1:27815589-27815823	chr1	+	27815591	27815767	True	NM_005281,NM_001201404,NM_006990	chr1,chr1,chr1	+,-,-	GPR3,WASF2,WASF2	-96492,961,961
chr9:94904527-94905353	chr9	+	94904580	94905270	True	NR_015444,NM_178324,NR_027341	chr9,chr9,chr9	+,-,+	LOC100128076,SPTLC1,C9orf44	-9515,-26890,-882
chr21:46874902-46875127	chr21	+	46874901	46874971	True	NM_130444,NR_027498,NM_030582	chr21,chr21,chr21	+,-,+	COL18A1,NCRNA00175,COL18A1	452,-29916,452
chrX:100549642-100550666	chrX	+	100549641	100549898	True	NM_024885,NM_001939,NM_001168474	chrX,chrX,chrX	-,+,-	TAF7L,DRP2,TAF7L	-1582,-74767,-3316
chr19:1606866-1607087	chr19	+	1606907	1607083	True	NM_006830,NR_026557	chr19,chr19	-,+	UQCR11,PLK5P	-1424,-82880
chr1:183599766-183600434	chr1	+	183599857	183600318	True	NM_015149,NM_005717	chr1,chr1	+,-	RGL1,ARPC5	4889,4728
chr4:15786533-15787396	chr4	+	15786817	15787405	True	NR_036464,NM_001775	chr4,chr4	-,+	FBXL5,CD38	-129782,-6937
chr17:80712027-80712670	chr17	+	80712220	80712556	True	NM_005993,NM_006822	chr17,chr17	+,-	TBCD,RAB40B	-2331,-55622
chr17:27052658-27052860	chr17	+	27052687	27052823	True	NM_001144942,NR_024575,NR_024579,NM_001144943,NM_000984,NR_000014,NM_178170,NM_031934,NR_000010,NR_000013,NM_138463,NM_001142625,NM_001160407,NM_001142624,NR_000009	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,+,+,+,-,+,+,-,-,-,-,+	RAB34,RAB34,RAB34,RAB34,RPL23A,SNORD42A,NEK8,RAB34,SNORD4A,SNORD42B,TLCD1,RAB34,TLCD1,RAB34,SNORD4B	-7779,-7436,-7436,-7401,-5738,-2291,3008,-7779,-3138,-5170,457,-7401,1176,-7401,-2039
chr3:120025809-120026031	chr3	+	120025843	120026075	True	NM_001099678,NM_001168331	chr3,chr3	-,+	LRRC58,NDUFB4	42161,289052
chr2:63278774-63279007	chr2	+	63278780	63278931	True	NR_027069,NM_014562,NM_001199770,NR_033389	chr2,chr2,chr2,chr2	-,+,+,-	LOC100132215,OTX1,OTX1,LOC100132215	-3934,-894,-1639,-3124
chrX:2483793-2484323	chrY	+	2433892	2434250	False	NM_145177,NR_033381	chrY,chrY	-,+	DHRSX,CD99P1	-64877,43055
chrX:2483793-2484323	chrX	+	2483892	2484250	True	NR_037842,NR_033381	chrX,chrX	-,+	NCRNA00102,CD99P1	49188,43055
chr4:16063807-16065750	chr4	+	16063928	16065767	True	NR_027696,NM_001145849	chr4,chr4	+,-	FLJ39653,PROM1	162518,12024
chr20:5296596-5296941	chr20	+	5296632	5296962	True	NM_144773,NR_029405	chr20,chr20	-,+	PROKR2,LOC643406	-1617,154879
chr4:1974312-1974719	chr4	+	1974347	1974569	True	NR_030641,NR_003004	chr4,chr4	-,+	MIR943,SCARNA22	13685,1793
chr12:26368071-26369207	chr12	+	26368074	26369163	True	NM_005086,NM_030762	chr12,chr12	+,-	SSPN,BHLHE41	-19620,-90071
chr6:26501951-26502283	chr6	+	26501994	26502288	True	NM_001732,NM_024639	chr6,chr6	+,-	BTN1A1,ZNF322A	-550,157727
chr5:40796272-40797686	chr5	+	40796654	40797683	True	NM_032587,NM_006251,NM_206907	chr5,chr5,chr5	+,-,-	CARD6,PRKAA1,PRKAA1	43726,664,664
chr17:32609692-32611179	chr17	+	32610325	32610815	True	NM_002986,NM_002981	chr17,chr17	+,-	CCL11,CCL1	1871,79487
chr1:37921605-37922151	chr1	+	37921632	37921921	True	NM_022756,NM_025079	chr1,chr1	-,+	MEAF6,ZC3H12A	58499,18197
chr19:52384621-52386337	chr19	+	52384655	52386214	True	NR_024181,NM_032679,NM_001031721,NM_001135590	chr19,chr19,chr19,chr19	-,-,+,-	ZNF577,ZNF577,ZNF613,ZNF577	5026,5066,44473,5026
chr17:72207921-72208320	chr17	+	72208034	72208272	True	NR_026914,NM_000999,NM_001035258,NM_032646	chr17,chr17,chr17,chr17	-,+,+,+	MGC16275,RPL38,RPL38,TTYH2	1246,-8290,-8290,1423
chr3:193853224-193853730	chr3	+	193853280	193853735	True	NR_033944,NM_005524	chr3,chr3	-,+	LOC647323,HES1	-131832,195
chr1:210130930-210132782	chr1	+	210131342	210132830	True	NR_027459,NM_006147	chr1,chr1	+,-	SYT14,IRF6	-19860,-151863
chr16:29754288-29755456	chr16	+	29754696	29755343	True	NM_175900,NM_152338	chr16,chr16	-,+	C16orf54,ZG16	2048,34217
chr5:32311906-32312436	chr5	+	32311917	32312319	True	NM_001040446,NM_006713	chr5,chr5	-,+	MTMR12,SUB1	845,273285
chr22:29709900-29710112	chr22	+	29709900	29710158	True	NM_006478,NM_152236,NM_152237,NM_001007279,NM_006477	chr22,chr22,chr22,chr22,chr22	+,+,+,-,-	GAS2L1,GAS2L1,GAS2L1,RASL10A,RASL10A	-6954,-6954,-6954,1640,1640
chr8:27626246-27627974	chr8	+	27626250	27627388	True	NM_018246,NM_001017420	chr8,chr8	-,+	CCDC25,ESCO2	2838,4669
chr8:132051692-132051917	chr8	+	132051718	132051932	True	NM_015137,NM_001115	chr8,chr8	+,-	EFR3A,ADCY8	864423,953
chr12:56753613-56753991	chr12	+	56753674	56753932	True	NM_198332,NM_005419,NM_016584,NM_001638	chr12,chr12,chr12,chr12	-,-,+,-	STAT2,STAT2,IL23A,APOF	155,155,-21062,2701
chr9:128527519-128529503	chr9	+	128527754	128529551	True	NM_001006618,NM_001134778	chr9,chr9	-,+	MAPKAP1,PBX3	-58241,-17328
chr1:11940022-11940475	chr1	+	11940148	11940416	True	NM_002521,NR_037806	chr1,chr1	-,+	NPPB,NPPA-AS1	-21156,-39823
chr6:32527743-32528966	chr6	+	32527799	32529005	True	NR_001298,NM_002122	chr6,chr6	-,+	HLA-DRB6,HLA-DQA1	-20,76177
chr20:44880955-44881926	chr20	+	44881130	44881960	True	NM_152854,NM_021248	chr20,chr20	+,-	CD40,CDH22	-134275,-796
chr16:86593018-86593574	chr16	+	86593307	86593445	True	NM_001159380,NM_001159378,NM_001159379,NR_027490,NM_005251,NM_022764,NM_001159377,NR_027489,NR_026674	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	-,-,-,-,+,-,-,-,+	MTHFSD,MTHFSD,MTHFSD,MTHFSD,FOXC2,MTHFSD,MTHFSD,MTHFSD,FLJ30679	-4498,-4466,-4466,-4466,7411,-4466,-4466,-4466,-4432
chr20:32801842-32802787	chr20	+	32802058	32802803	True	NM_001672,NM_000687	chr20,chr20	+,-	ASIP,AHCY	45367,88463
chr2:234982998-234984229	chr2	+	234983043	234983989	True	NM_006944,NR_024322	chr2,chr2	+,-	SPP2,MSL3P1	-23748,-205988
chr15:45153885-45154583	chr15	+	45153977	45154303	True	NM_001145112,NM_152448	chr15,chr15	-,+	PATL2,C15orf43	-184891,94599
chr12:130820807-130821385	chr12	+	130821238	130821418	True	NR_033834,NM_004764,NM_001190971	chr12,chr12,chr12	-,+,+	FLJ31485,PIWIL1,PIWIL1	-175015,1014,1014
chr11:20045852-20047076	chr11	+	20045882	20047099	True	NM_001111019,NM_001029865	chr11,chr11	+,-	NAV2,DBX1	-1303,134821
chr12:13106266-13108220	chr12	+	13106594	13108234	True	NM_018654,NR_030345	chr12,chr12	-,+	GPRC5D,MIR614	-3276,-37882
chr10:32393837-32394565	chr10	+	32393898	32394437	True	NM_004521,NM_001026383	chr10,chr10	-,+	KIF5B,CCDC7	-48527,340603
chr1:95539749-95540198	chr1	+	95539755	95540249	True	NM_001199679,NM_144988	chr1,chr1	+,-	TMEM56,ALG14	17823,-1248
chr13:111272598-111273934	chr13	+	111272985	111273550	True	NM_017817,NM_018210	chr13,chr13	-,+	RAB20,CARKD	-58914,-5036
chr10:27153332-27154033	chr10	+	27153836	27154042	True	NM_001178119,NM_005470,NM_001178116,NM_001178120,NM_001178121,NM_001178122,NM_001178123,NM_001178124,NM_001178125,NM_014317,NM_001012750,NM_001012751,NM_001012752	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,-,-,-,-,-,+,-,-,-	ABI1,ABI1,ABI1,ABI1,ABI1,ABI1,ABI1,ABI1,ABI1,PDSS1,ABI1,ABI1,ABI1	-3820,-3820,-3820,-3820,-3820,-3820,-3820,-3820,-3820,-167300,-3820,-3820,-3820
chr5:75013720-75014128	chr5	+	75013791	75014177	True	NM_152408,NM_016218,NM_001099271	chr5,chr5,chr5	-,+,-	POC5,POLK,POC5	-5511,-206185,-478
chr1:1710963-1711528	chr1	+	1711232	1711476	True	NM_001198993,NR_002946,NM_023018,NM_001198994	chr1,chr1,chr1,chr1	-,+,-,-	NADK,MMP23A,NADK,NADK	-935,-79905,-1323,82
chr1:159823685-159824039	chr1	+	159823722	159823956	True	NM_020125,NM_001013661,NM_001134233	chr1,chr1,chr1	+,-,-	SLAMF8,VSIG8,C1orf204	-27305,8541,1231
chr1:27668566-27668996	chr1	+	27668774	27668890	True	NM_032872,NM_001193308,NM_004672	chr1,chr1,chr1	+,+,-	SYTL1,SYTL1,MAP3K6	-342,-342,24497
chr18:3346752-3347880	chr18	+	3347152	3347721	True	NM_019856,NM_174886	chr18,chr18	-,+	MYOM1,TGIF1	-127046,64350
chr10:96102562-96103819	chr10	+	96103151	96103871	True	NM_022451,NM_015188	chr10,chr10	-,+	NOC3L,TBC1D12	18869,58314
chr19:44308283-44308908	chr19	+	44308305	44308796	True	NM_001031749,NM_181845	chr19,chr19	-,+	LYPD5,ZNF283	-1692,22676
chr19:43422878-43423324	chr19	+	43422942	43423272	True	NM_002782,NM_001031850,NR_036584	chr19,chr19,chr19	-,-,+	PSG6,PSG6,LOC100289650	-953,-899,-96978
chr16:2733098-2734440	chr16	+	2733203	2734334	True	NM_031948,NM_018992	chr16,chr16	-,+	PRSS27,KCTD5	36275,-759
chr16:2733098-2734440	chr16	+	2654527	2654973	False	NR_036139,NR_015441	chr16,chr16	-,+	MIR3178,LOC652276	-72521,-1193
chr9:126771573-126772007	chr9	+	126771625	126772003	True	NM_004789,NM_024820	chr9,chr9	+,-	LHX2,DENND1A	1885,-79208
chr18:63416223-63417880	chr18	+	63416247	63417789	True	NM_021153,NM_004361,NM_033646	chr18,chr18,chr18	-,+,+	CDH19,CDH7,CDH7	853477,367,68
chr8:107728094-107728572	chr8	+	107728140	107728575	True	NM_001198535,NM_001198534,NM_139166	chr8,chr8,chr8	+,+,-	OXR1,OXR1,ABRA	9759,9759,53954
chr14:52450088-52451396	chr14	+	52450087	52451373	True	NM_007361,NM_016039	chr14,chr14	-,+	NID2,C14orf166	84637,4854
chr7:44104582-44105098	chr7	+	44104686	44105128	True	NM_000290,NM_014063	chr7,chr7	-,+	PGAM2,DBNL	108,-20498
chr19:44456318-44456772	chr19	+	44456384	44456771	True	NM_003425,NM_013359	chr19,chr19	-,+	ZNF45,ZNF221	-16973,-1038
chr6:33266757-33267097	chr6_qbl_hap6	+	4499186	4499338	False	NM_001164267,NR_028387,NM_004761,NM_005452,NM_001185181,NM_014260	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	-,-,-,-,+,+	WDR46,RGL2,RGL2,WDR46,PFDN6,PFDN6	-9639,128,128,-9639,-9582,-9616
chr6:33266757-33267097	chr6_mcf_hap5	+	4740690	4740854	False	NR_028387,NM_014260,NM_001164267,NM_005452,NM_004761	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	-,+,-,-,-	RGL2,PFDN6,WDR46,WDR46,RGL2	116,-9619,-9642,-9642,116
chr6:33266757-33267097	chr6_cox_hap2	+	4710760	4710924	False	NR_028387,NM_014260,NM_001164267,NM_005452,NM_004761	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	-,+,-,-,-	RGL2,PFDN6,WDR46,WDR46,RGL2	116,-9619,-9642,-9642,116
chr6:33266757-33267097	chr6	+	33266946	33267110	True	NM_001164267,NR_028387,NM_004761,NM_005452,NM_001185181,NM_014260	chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,-,+,+	WDR46,RGL2,RGL2,WDR46,PFDN6,PFDN6	-9642,116,116,-9642,-9585,-9619
chr6:33266757-33267097	chr6_dbb_hap3	+	4548272	4548436	False	NR_028387,NM_014260,NM_001164267,NM_005452,NM_004761	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	-,+,-,-,-	RGL2,PFDN6,WDR46,WDR46,RGL2	116,-9619,-9642,-9642,116
chr11:5812351-5812625	chr11	+	5812350	5812615	True	NM_001005174,NM_001001913	chr11,chr11	+,-	OR52N2,OR52N1	28950,-2304
chr14:75074916-75075267	chr14	+	75074916	75075119	True	NM_015962,NM_000428	chr14,chr14	+,-	FCF1,LTBP2	104730,3971
chr7:128400933-128401410	chr7	+	128400994	128401374	True	NM_001708,NM_001219	chr7,chr7	-,+	OPN1SW,CALU	14527,-21699
chr19:3607851-3608744	chr19	+	3607908	3608714	True	NM_001060,NM_133261,NM_201636	chr19,chr19,chr19	-,+,-	TBXA2R,GIPC3,TBXA2R	-1077,-22391,-1077
chr8:8555998-8556967	chr8	+	8556029	8556953	True	NM_004225,NM_194284	chr8,chr8	-,+	MFHAS1,CLDN23	194228,2712
chr4:15349562-15351029	chr4	+	15349690	15351067	True	NM_001135170,NM_001193534	chr4,chr4	+,-	C1QTNF7,FBXL5	-8181,306018
chr1:85461301-85461643	chr1	+	85461330	85461683	True	NM_145172,NM_153259	chr1,chr1	+,-	WDR63,MCOLN2	66309,1165
chr11:61523890-61524116	chr11	+	61523935	61524157	True	NR_026882,NM_013279,NM_001127392	chr11,chr11,chr11	-,+,+	DKFZP434K028,C11orf9,C11orf9	1029,-1125,-3865
chr17:44625984-44626998	chr17_ctg5_hap1	+	1483194	1483390	False	NR_002940,NM_016632	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LRRC37A4,ARL17A	-1876,30544
chr17:44625984-44626998	chr17_ctg5_hap1	-	204181	204377	False	NM_001113738,NR_027782	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	ARL17A,PLEKHM1	-8511,-20967
chr17:44625984-44626998	chr17_ctg5_hap1	-	422101	422297	False	NM_001039083,NR_002940	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	ARL17B,LRRC37A4	-30540,1876
chr17:44625984-44626998	chr17	+	44626349	44626545	True	NM_001006607,NM_016632	chr17,chr17	+,-	LRRC37A2,ARL17A	-36332,30593
chr17:44625984-44626998	chr17	+	44408487	44408683	False	NM_001103154,NM_014834	chr17,chr17	-,+	ARL17B,LRRC37A	30501,-36049
chr9:98190728-98191498	chr9	+	98190821	98191465	True	NR_029496,NM_001083607	chr9,chr9	+,-	MIR24-1,PTCH1	-342584,78066
chr17:72209196-72209458	chr17	+	72209216	72209462	True	NR_026914,NM_000999,NM_001035258,NM_032646	chr17,chr17,chr17,chr17	-,+,+,+	MGC16275,RPL38,RPL38,TTYH2	48,-9472,-9472,233
chr7:48134606-48135733	chr7	+	48134622	48135772	True	NM_181597,NM_003364,NM_152782	chr7,chr7,chr7	+,+,-	UPP1,UPP1,SUN3	-6318,-5927,-65906
chr22:39796552-39796760	chr22	+	39796580	39796761	True	NM_006116,NM_153497,NM_001033853	chr22,chr22,chr22	+,+,-	TAB1,TAB1,RPL3	-872,-872,-80910
chr3:47049360-47050485	chr3	+	47049637	47050433	True	NR_024046,NM_144716	chr3,chr3	+,-	NRADDP,CCDC12	2598,-31367
chr10:25448321-25449563	chr10	+	25448331	25449496	True	NM_020752,NR_027333	chr10,chr10	+,-	GPR158,LOC100128811	14793,15767
chr19:57654621-57655134	chr19	+	57654724	57654976	True	NM_020903,NM_052882	chr19,chr19	+,-	USP29,ZIM3	-23273,1644
chr2:107118718-107119152	chr2	+	107118774	107119174	True	NM_001144013,NR_003506	chr2,chr2	-,+	RGPD3,PLGLA	-33973,-116064
chr1:2982335-2983054	chr1	+	2982342	2982728	True	NM_022114,NR_024371,NR_015440,NM_199454	chr1,chr1,chr1,chr1	+,-,-,+	PRDM16,FLJ42875,FLJ42875,PRDM16	3013,1615,1615,3013
chr16:75285577-75285849	chr16	+	75285585	75285898	True	NM_001170719,NM_001906,NM_001170717,NM_014567	chr16,chr16,chr16,chr16	-,+,-,-	BCAR1,CTRB1,BCAR1,BCAR1	-3361,-32752,-59,-59
chr4:39035410-39036796	chr4	+	39035467	39036588	True	NM_024943,NM_001171654,NM_001007075	chr4,chr4,chr4	-,+,+	TMEM156,KLHL5,KLHL5	-1426,9862,9862
chr13:26795863-26796087	chr13	+	26795879	26796075	True	NM_001260,NM_183043,NM_005977,NM_183044	chr13,chr13,chr13,chr13	+,-,-,-	CDK8,RNF6,RNF6,RNF6	32680,3,483,15
chr13:103502058-103503936	chr13	+	103502103	103503646	True	NM_000123,NM_024089	chr13,chr13	+,-	ERCC5,KDELC1	-3970,-50699
chr7:131422815-131423191	chr7	+	131422820	131423198	True	NM_005397,NM_013255	chr7,chr7	-,+	PODXL,MKLN1	-181444,-410276
chr16:66993709-66993950	chr16	+	66993860	66993934	True	NM_001185177,NM_001185176,NM_024922,NR_024525	chr16,chr16,chr16,chr16	+,+,+,-	CES3,CES3,CES3,FAM96B	1197,7443,1197,-25540
chr17:75141802-75142327	chr17	+	75141979	75142223	True	NR_036200,NM_001039573,NM_003003,NM_001143999,NM_001143998	chr17,chr17,chr17,chr17,chr17	-,+,+,+,+	MIR4316,SEC14L1,SEC14L1,SEC14L1,SEC14L1	250963,-5025,-5025,-5025,-5025
chr2:120124845-120125057	chr2	+	120124865	120125097	True	NM_001079863,NM_001178017,NM_020548,NM_001079862,NM_001178043,NM_001178042,NM_001178041,NM_001017927	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,+,+,+,-	DBI,DBI,DBI,DBI,DBI,DBI,DBI,C2orf76	153,-87,-363,-412,-363,-363,-363,-607
chr16:88716147-88716588	chr16	+	88716158	88716406	True	NM_013278,NM_000101	chr16,chr16	+,-	IL17C,CYBA	-11208,1101
chr11:27377856-27378970	chr11	+	27378052	27378990	True	NR_002832,NM_080654,NM_030771	chr11,chr11,chr11	+,-,-	BDNF-AS1,CCDC34,CCDC34	149408,5856,5856
chr5:10583360-10584135	chr5	+	10583411	10584135	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-19038,177302
chr20:443239-444557	chr20	+	443279	443845	True	NM_144628,NM_031229	chr20,chr20	-,+	TBC1D20,RBCK1	-92,-54621
chr8:70041701-70042109	chr8	+	70041707	70042097	True	NM_001128204,NM_001146009	chr8,chr8	+,-	SULF1,SLCO5A1	336761,703357
chr9:16871299-16871581	chr9	+	16871399	16871473	True	NM_017637,NM_001114395	chr9,chr9	-,+	BNC2,CNTLN	-613,263564
chr6:134157833-134158264	chr6	+	134158124	134158312	True	NR_027030,NM_145176	chr6,chr6	+,-	MGC34034,SLC2A12	-15897,215527
chr22:17680142-17680475	chr22	+	17680218	17680524	True	NM_177405,NR_024483	chr22,chr22	-,+	CECR1,CECR4	71,-39990
chr5:6632739-6632944	chr5	+	6632785	6632851	True	NM_017755,NR_037947,NM_001193455,NM_001047	chr5,chr5,chr5,chr5	-,-,-,+	NSUN2,NSUN2,NSUN2,SRD5A1	672,672,672,648
chrX:71263737-71264376	chrX	+	71263742	71264357	True	NR_002309,NM_001024455	chrX,chrX	+,-	RPS26P11,RGAG4	-34,87447
chrX:15290197-15291221	chrX	+	15290285	15291207	True	NM_024087,NM_203281,NM_001031739,NM_001168530,NM_001168531	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	ASB9,BMX,ASB9,ASB9,ASB9	-1992,227692,-1992,-1992,-1696
chr5:156537575-156538042	chr5	+	156537602	156537865	True	NM_005546,NM_032782	chr5,chr5	+,-	ITK,HAVCR2	70041,-1464
chr11:118024240-118024719	chr11	+	118024298	118024749	True	NR_024527,NM_001142349,NM_001142348,NM_019894,NM_174934	chr11,chr11,chr11,chr11,chr11	-,-,-,+,-	SCN4B,SCN4B,SCN4B,TMPRSS4,SCN4B	-8114,-8114,-668,-76622,-668
chr20:2443805-2444507	chr20	+	2443886	2444328	True	NR_003684,NM_003091,NM_080751,NM_198216	chr20,chr20,chr20,chr20	-,-,+,-	SNORD119,SNRPB,TMC2,SNRPB	-193,7229,72924,7229
chr15:85307419-85307694	chr15	+	85307475	85307735	True	NM_014630,NM_014300	chr15,chr15	+,-	ZNF592,SEC11A	-15708,-47801
chr15:30338008-30338235	chr15	+	30338089	30338219	True	NR_026859,NM_175610	chr15,chr15	+,-	FAM7A3,TJP1	57715,-223383
chr2:66661650-66661948	chr2	+	66661665	66661971	True	NM_181784,NM_002398	chr2,chr2	-,+	SPRED2,MEIS1	-1002009,560
chr4:125382474-125383867	chr4	+	125382695	125383252	True	NM_020337,NR_027106	chr4,chr4	-,+	ANKRD50,LOC285419	250685,-687334
chr19:1002047-1002855	chr19	+	1002582	1002820	True	NM_138690,NM_001033026	chr19,chr19	+,-	GRIN3B,C19orf6	-2196,18371
chr17:62486132-62487029	chr17	+	62486453	62486991	True	NM_138363,NM_007215	chr17,chr17	+,-	CCDC45,POLG2	16166,6249
chr2:54786043-54786353	chr2	+	54786077	54786371	True	NM_178313,NM_001003937	chr2,chr2	+,-	SPTBN1,TSPYL6	-597,-302668
chr12:48518696-48519326	chr12	+	48518756	48519006	True	NM_000289,NM_001166688,NM_014554,NM_001166687	chr12,chr12,chr12,chr12	+,+,-,+	PFKM,PFKM,SENP1,PFKM	-5796,-2379,-19115,-2379
chr15:51895987-51897686	chr15	+	51896266	51897119	True	NM_001174116,NM_001165257	chr15,chr15	-,+	DMXL2,SCG3	17905,76430
chr9:130913012-130913529	chr9	+	130913045	130913319	True	NR_027812,NM_024112,NM_005564	chr9,chr9,chr9	-,+,+	PTGES2,C9orf16,LCN2	-22333,9219,-1364
chr19:8408507-8408808	chr19	+	8408536	8408604	True	NM_001039667,NM_198471	chr19,chr19	+,-	ANGPTL4,KANK3	20406,-390
chr12:13044895-13045392	chr12	+	13045033	13045285	True	NM_018654,NM_003979	chr12,chr12	-,+	GPRC5D,GPRC5A	58083,-1129
chr9:79100247-79101891	chr9	+	79100539	79101908	True	NM_001097635,NM_018339	chr9,chr9	+,-	GCNT1,RFK	-7334,-91095
chr19:38881106-38881900	chr19	+	38881235	38881801	True	NM_001042522,NM_001039616,NM_152657	chr19,chr19,chr19	+,+,-	SPRED3,SPRED3,GGN	-354,-354,-2567
chr8:33459457-33460877	chr8	+	33459630	33460593	True	NM_032509,NM_024025	chr8,chr8	+,-	MAK16,DUSP26	-117005,-2191
chr17:7185181-7185422	chr17	+	7185227	7185461	True	NM_001042,NM_015982	chr17,chr17	+,-	SLC2A4,YBX2	-224,12465
chr4:139999239-140000639	chr4	+	139999238	140000696	True	NM_006874,NM_012118	chr4,chr4	-,+	ELF2,CCRN4L	5010,-62346
chr7:128785285-128785564	chr7	+	128785309	128785459	True	NM_178562,NR_034053	chr7,chr7	+,-	TSPAN33,TNPO3	-648,-90082
chr15:101399390-101399717	chr15	+	101399449	101399657	True	NM_001040616,NM_000693	chr15,chr15	-,+	LINS,ALDH1A3	-257004,20351
chr2:40588432-40589125	chr2	+	40588495	40588900	True	NM_001112800,NM_152390	chr2,chr2	-,+	SLC8A1,TMEM178	68594,-695518
chrX:134473478-134474535	chrX	+	134473543	134474533	True	NM_007131,NM_152695	chrX,chrX	-,+	ZNF75D,ZNF449	-43578,4162
chr16:30772078-30772529	chr16	+	30772114	30772532	True	NM_001195620,NM_014771,NM_001014979	chr16,chr16,chr16	-,+,-	C16orf93,RNF40,C16orf93	1091,1097,1091
chr19:30433674-30434160	chr19	+	30433690	30433976	True	NM_134447,NM_003796,NM_031448	chr19,chr19,chr19	+,+,-	C19orf2,C19orf2,C19orf12	-317,-317,-227238
chr6:75977450-75977948	chr6	+	75977483	75977977	True	NM_001143958,NM_001100409	chr6,chr6	-,+	TMEM30A,SENP6	16705,333644
chr12:27538929-27539653	chr12	+	27538954	27539547	True	NM_001080406,NM_020183	chr12,chr12	-,+	C12orf71,ARNTL2	-303499,-53017
chr2:171672957-171673193	chr2	+	171672963	171673242	True	NM_013445,NM_000817,NR_027433	chr2,chr2,chr2	+,+,-	GAD1,GAD1,LOC440925	-35,-35,-101886
chr13:111838509-111839252	chr13	+	111838644	111839246	True	NM_001113513,NM_017664	chr13,chr13	+,-	ARHGEF7,ANKRD10	-74,-271228
chr10:26235662-26236413	chr10	+	26235832	26236276	True	NM_017433,NR_027333	chr10,chr10	+,-	MYO3A,LOC100128811	-12892,-770627
chr17:72211060-72211377	chr17	+	72211248	72211319	True	NR_026914,NM_032646	chr17,chr17	-,+	MGC16275,TTYH2	-1788,-1603
chr19:35082880-35084531	chr19	+	35082935	35084509	True	NM_001025591,NM_001012320	chr19,chr19	-,+	SCGBL,ZNF302	1031,84057
chr2:48846821-48847638	chr2	+	48846822	48847646	True	NM_001193487,NM_000233,NM_006872	chr2,chr2,chr2	+,-,+	GTF2A1L,LHCGR,GTF2A1L	-1937,135284,-1937
chr22:46690522-46691805	chr22	+	46690632	46691752	True	NR_024009,NM_016426	chr22,chr22	-,+	CN5H6.4,GTSE1	855,885
chr14:103849087-103849985	chr14	+	103849092	103849427	True	NM_001128918,NM_001128919,NM_001823,NM_001128920,NM_001128921,NM_002376	chr14,chr14,chr14,chr14,chr14,chr14	+,+,-,+,+,+	MARK3,MARK3,CKB,MARK3,MARK3,MARK3	2273,2273,139800,2273,2273,2273
chr5:5421073-5421359	chr5	+	5421088	5421396	True	NM_015325,NR_028351	chr5,chr5	+,-	KIAA0947,FLJ33360	1410,916059
chrX:103318104-103318803	chrX	+	103318120	103318633	True	NR_003238,NM_001164416	chrX,chrX	-,+	H2BFXP,H2BFM	-618,-23655
chrX:103318104-103318803	chrX	-	103229370	103229883	False	NR_003238,NM_001002916	chrX,chrX	+,-	H2BFXP,H2BFWT	618,38423
chr3:49226390-49227214	chr3	+	49226878	49227184	True	NM_001080528,NM_178173,NM_001135197	chr3,chr3,chr3	-,+,+	LOC646498,CCDC36,CCDC36	2157,8676,9748
chr2:74371825-74373210	chr2	+	74371999	74373001	True	NM_212552,NM_006636,NM_001035505	chr2,chr2,chr2	-,+,-	BOLA3,MTHFD2,BOLA3	2088,52688,2088
chr15:22561348-22561877	chr15	+	22561420	22561922	True	NR_027407,NR_033735	chr15,chr15	-,+	GOLGA8DP,REREP3	153856,-14917
chr1:225838406-225840069	chr1	+	225838630	225839942	True	NM_001130440,NM_018212,NM_001008493	chr1,chr1,chr1	+,-,-	SRP9,ENAH,ENAH	125572,953,953
chr9:100397969-100399219	chr9	+	100398289	100399254	True	NM_139246,NM_002486	chr9,chr9	-,+	TSTD2,NCBP1	-2327,-2635
chr10:102506211-102506897	chr10	+	102506290	102506802	True	NM_003990,NM_005004,NM_003989,NM_003988,NM_003987,NM_000278	chr10,chr10,chr10,chr10,chr10,chr10	+,-,+,+,+,+	PAX2,NDUFB8,PAX2,PAX2,PAX2,PAX2	-873,-216654,-873,-873,-873,-873
chr15:74661942-74663420	chr15	+	74662093	74663407	True	NM_001099773,NM_182791,NM_000781	chr15,chr15,chr15	-,+,-	CYP11A1,CCDC33,CYP11A1	-3540,-51256,-2012
chr3:50306942-50307872	chr3	+	50307298	50307838	True	NM_006764,NM_153215,NM_004636,NM_001005914	chr3,chr3,chr3,chr3	-,+,+,+	IFRD2,C3orf45,SEMA3B,SEMA3B	22238,8679,-2309,-2309
chr16:68002632-68002907	chr16	+	68002809	68002895	True	NM_001145961,NM_001145962,NM_001145963,NM_001145964,NM_005072,NM_017803	chr16,chr16,chr16,chr16,chr16,chr16	-,-,-,-,-,+	SLC12A4,SLC12A4,SLC12A4,SLC12A4,SLC12A4,DUS2L	-212,-212,-4841,-2028,-212,54308
chr1:202090570-202091231	chr1	+	202090640	202091210	True	NM_004767,NM_138795	chr1,chr1	+,-	GPR37L1,ARL8A	818,22708
chr1:169072773-169074505	chr1	+	169072871	169074367	True	NM_001677,NM_013330	chr1,chr1	+,-	ATP1B1,NME7	1579,262869
chr16:10933364-10933961	chr16	+	10933366	10933986	True	NM_000246,NM_001079512	chr16,chr16	+,-	CIITA,FAM18A	37068,-20745
chr17:61525145-61525783	chr17	+	61525381	61525667	True	NM_001017917,NM_001915,NM_000789,NM_001017916	chr17,chr17,chr17,chr17	-,-,+,-	CYB561,CYB561,ACE,CYB561	-7174,-1659,28754,-1836
chr17:3035494-3036195	chr17	+	3035494	3036176	True	NM_012352,NM_003555	chr17,chr17	+,-	OR1A2,OR1G1	64636,-4649
chr19:12791988-12792362	chr19	+	12792011	12792395	True	NM_013407,NM_032332,NM_001930,NM_013406	chr19,chr19,chr19,chr19	-,+,-,-	DHPS,WDR83,DHPS,DHPS	332,-11545,332,332
chr6:42982395-42983510	chr6	+	42982536	42983296	True	NM_057161,NM_033112,NM_014623	chr6,chr6,chr6	+,+,-	KLHDC3,RRP36,MEA1	-610,6088,-918
chr1:16956010-16956856	chr1	+	16956494	16956568	True	NR_026752,NR_027504	chr1,chr1	-,+	CROCCP2,MST1P2	883,15500
chr9:137003023-137003642	chr9	+	137003459	137003653	True	NR_023344,NM_017588,NM_052821	chr9,chr9,chr9	-,+,+	RNU6ATAC,WDR5,WDR5	26083,-2300,1260
chr22:38666925-38667593	chr22	+	38666966	38667586	True	NM_012264,NM_001195072,NM_001195071,NM_001161573	chr22,chr22,chr22,chr22	-,-,-,+	TMEM184B,TMEM184B,TMEM184B,MAFF	1504,1504,1134,-67990
chr13:111572002-111572503	chr13	+	111572178	111572552	True	NM_017664,NM_001113511	chr13,chr13	-,+	ANKRD10,ARHGEF7	-4762,195071
chr19:52002937-52003875	chr19	+	52002957	52003797	True	NM_053003,NM_033329,NM_001080405	chr19,chr19,chr19	-,-,+	SIGLEC12,SIGLEC12,CEACAM18	1296,-100,-23170
chr4:40751544-40751780	chr4	+	40751672	40751741	True	NM_001166051,NM_024677	chr4,chr4	-,+	APBB2,NSUN7	107484,172
chr6:24357820-24358296	chr6	+	24357832	24358288	True	NM_016356,NM_181337	chr6,chr6	-,+	DCDC2,KAAG1	42,-752
chr10:104611643-104612252	chr10	+	104612004	104612087	True	NM_000102,NM_144591,NR_037644,NM_001136200	chr10,chr10,chr10,chr10	-,+,+,+	CYP17A1,C10orf32,C10orf32-AS3MT,C10orf32	-14714,1879,1879,1879
chr14:74036220-74036476	chr14	+	74036263	74036447	True	NM_203309,NM_006821	chr14,chr14	-,+	HEATR4,ACOT2	-10612,-542
chr14:74036220-74036476	chr14	+	74004392	74004442	False	NM_203309,NM_001037161	chr14,chr14	-,+	HEATR4,ACOT1	21259,-515
chr2:202669196-202669894	chr2	+	202669227	202669901	True	NM_001135745,NM_139158	chr2,chr2	-,+	ALS2,CDK15	-23332,1296
chr6:26196283-26196792	chr6	+	26196505	26196816	True	NM_021065,NM_003545,NM_003539,NM_003530,NM_003522	chr6,chr6,chr6,chr6,chr6	-,+,-,-,+	HIST1H2AD,HIST1H4E,HIST1H4D,HIST1H3D,HIST1H2BF	2705,8056,-7201,2698,2970
chr3:27501819-27503307	chr3	+	27502020	27503029	True	NM_003615,NM_182523	chr3,chr3	-,+	SLC4A7,CMC1	-3775,780094
chr5:76392647-76393742	chr5	+	76392778	76393789	True	NR_024398,NM_032367	chr5,chr5	+,-	LOC728723,ZBED3	-10206,-9748
chr5:63257556-63257811	chr5	+	63257637	63257859	True	NM_000524,NM_178532	chr5,chr5	-,+	HTR1A,RNF180	-91,203811
chr18:32871880-32873286	chr18	+	32871884	32873325	True	NM_001112734,NR_024565,NM_001166012,NR_024566	chr18,chr18,chr18,chr18	-,+,-,+	ZSCAN30,ZNF271,ZSCAN30,ZNF271	-1688,-1699,-1688,-1699
chr12:50015637-50015939	chr12	+	50015718	50015905	True	NM_012272,NM_001031698,NM_032130	chr12,chr12,chr12	+,+,-	PRPF40B,PRPF40B,FAM186B	1497,8421,-16285
chr2:241372364-241373068	chr2	+	241372560	241373064	True	NR_024014,NM_002081	chr2,chr2	-,+	PP14571,GPC1	23103,2050
chr2:17931373-17932638	chr2	+	17931485	17932430	True	NM_024624,NM_001130009,NM_001142286,NM_182625	chr2,chr2,chr2,chr2	-,+,-,+	SMC6,GEN1,SMC6,GEN1	2725,2983,2725,2746
chr6:45982412-45982925	chr6	+	45982463	45982824	True	NM_016929,NM_014936	chr6,chr6	-,+	CLIC5,ENPP4	832,114876
chr5:177399263-177401099	chr5	+	177399397	177400709	True	NM_006261,NM_001079527	chr5,chr5	-,+	PROP1,FAM153C	22585,34979
chr12:52981199-52981402	chr12	+	52981254	52981378	True	NM_175053,NM_002284	chr12,chr12	-,+	KRT74,KRT86	-13645,-285656
chr19:45251308-45251776	chr19	+	45251359	45251637	True	NM_005178,NR_027754	chr19,chr19	+,-	BCL3,CEACAM22P	340,-191209
chr9:5888148-5889084	chr9	+	5888171	5888986	True	NM_024896,NM_005511	chr9,chr9	-,+	ERMP1,MLANA	-55090,1922
chr1:161198045-161199172	chr1	+	161198203	161198877	True	NM_001077470,NM_001077471,NM_001077472,NM_001077473,NM_001077474,NM_001643,NM_001077476,NM_001077477,NM_001077478,NM_001077479,NM_001077469,NM_001077481,NM_001077480,NM_001077482,NM_032174,NM_005122,NM_001077475	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,-,-,-,-,-,-,-,-,-,+,-,-	NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,APOA2,NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,TOMM40L,NR1I3,NR1I3	9173,9173,9173,9173,9173,-4785,9173,9173,9173,9173,9173,9173,9173,9173,-2422,9173,9173
chr6:27770799-27772060	chr6	+	27771343	27772069	True	NM_003536,NM_003509,NM_003519	chr6,chr6,chr6	+,+,-	HIST1H3H,HIST1H2AI,HIST1H2BL	5772,3907,3690
chr16:70681523-70681954	chr16	+	70681547	70681751	True	NM_001172772,NM_138383	chr16,chr16	+,-	IL34,MTSS1L	-23703,38253
chr10:12171702-12171910	chr10	+	12171702	12171938	True	NM_018144,NR_024576,NR_024577,NM_014142,NM_001142628,NM_001142627	chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,-,+,+	SEC61A2,SEC61A2,SEC61A2,NUDT5,SEC61A2,SEC61A2	-113,-113,-113,66255,-113,-113
chr2:109338356-109339202	chr2	+	109338629	109338703	True	NM_022336,NM_006267	chr2,chr2	-,+	EDAR,RANBP2	267177,-2749
chr6:168375693-168377436	chr6	+	168375701	168376747	True	NM_005355,NM_001129895	chr6,chr6	+,-	KIF25,HGC6.3	41805,922
chr14:20402037-20402988	chr14	+	20402065	20402778	True	NM_001004712,NM_001004063	chr14,chr14	-,+	OR4K14,OR4K1	80630,988
chr8:17577776-17579325	chr8	+	17577878	17579301	True	NM_001001931,NM_006207,NM_001166393	chr8,chr8,chr8	-,+,-	MTUS1,PDGFRL,MTUS1	479,-143987,833
chr19:35630155-35630410	chr19	+	35630245	35630313	True	NM_005031,NM_021902,NM_139284,NM_022006	chr19,chr19,chr19,chr19	+,+,-,+	FXYD1,FXYD1,LGI4,FXYD7	78,-564,-4067,3840
chr6:155535374-155536024	chr6	+	155535431	155535924	True	NM_016020,NM_001010927	chr6,chr6	-,+	TFB1M,TIAM2	99756,2172
chr16:29478392-29478728	chr16	+	29478469	29478677	True	NR_002556,NR_002557,NM_001017390,NM_177552	chr16,chr16,chr16,chr16	-,-,+,+	LOC388242,LOC613038,SULT1A4,SULT1A3	272,272,-7313,-7313
chr16:29478392-29478728	chr16	+	30217818	30218026	False	NR_002556,NR_002557,NM_001017390,NM_177552	chr16,chr16,chr16,chr16	-,-,+,+	LOC388242,LOC613038,SULT1A4,SULT1A3	272,272,-7320,-7320
chr10:50119066-50119339	chr10	+	50119075	50119387	True	NM_020945,NM_001006939	chr10,chr10	+,-	WDFY4,LRRC18	-225608,2943
chr10:81314209-81316056	chr10	+	81314531	81315948	True	NM_001099692,NM_001098668	chr10,chr10	+,-	EIF5AL1,SFTPA2	-42231,4266
chr17:4613043-4613537	chr17	+	4613069	4613479	True	NM_004313,NM_199004,NM_014389	chr17,chr17,chr17	+,+,-	ARRB2,ARRB2,PELP1	309,309,-5437
chr9:127213317-127214800	chr9	+	127213692	127214630	True	NM_002799,NM_001161808	chr9,chr9	-,+	PSMB7,GPR144	-35971,-320
chr15:51058040-51058318	chr15	+	51058054	51058366	True	NM_032802,NM_007347	chr15,chr15	-,+	SPPL2A,AP4E1	-144,142579
chr6:34711222-34711925	chr6	+	34711292	34711769	True	NM_024294,NM_003093	chr6,chr6	-,+	C6orf106,SNRPC	-46667,13101
chr19:44143078-44143325	chr19	+	44143091	44143289	True	NM_001145641,NM_145296	chr19,chr19	+,-	SRRM5,CADM4	-26889,752
chr3:25831618-25833263	chr3	+	25831955	25833127	True	NM_017897,NM_001145294,NM_001145295,NM_001145293,NM_018297,NR_026937,NM_001145391	chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,-,-,-,-,+,+	OXSM,NGLY1,NGLY1,NGLY1,NGLY1,OXSM,OXSM	-443,-425,-6966,-6966,-6966,-443,-443
chr2:202557035-202558685	chr2	+	202557403	202558677	True	NM_033066,NM_139158	chr2,chr2	-,+	MPP4,CDK15	4790,112520
chr3:183980190-183980731	chr3	+	183980376	183980756	True	NM_033259,NM_014693,NM_001037324	chr3,chr3,chr3	-,+,+	CAMK2N2,ECE2,ECE2	-1125,-12982,13042
chr3:127349156-127349837	chr3	+	127349187	127349766	True	NM_015720,NM_001142646	chr3,chr3	+,-	PODXL2,TPRA1	-1199,-39619
chr11:50374994-50376789	chr11	+	50374995	50376829	True	NR_024504,NR_003034	chr11,chr11	+,-	LOC646813,LOC441601	-6736,-117362
chr4:9494438-9495334	chr4	+	9494729	9495223	True	NR_031688,NM_001040448	chr4,chr4	-,+	MIR548I2,DEFB131	62764,-48520
chrX:34676824-34677038	chrX	+	34676863	34677078	True	NM_152631,NM_031442	chrX,chrX	+,-	FAM47B,TMEM47	283834,-1458
chr8:38964324-38965079	chr8	+	38964462	38965032	True	NM_078473,NM_145004	chr8,chr8	-,+	TM2D2,ADAM32	-110421,17
chr1:14744414-14744830	chr1	+	14744587	14744861	True	NM_015209,NR_027136	chr1,chr1	+,-	KAZN,C1orf126	180351,734149
chr2:183579579-183580761	chr2	+	183579644	183580562	True	NM_018981,NM_001463	chr2,chr2	+,-	DNAJC10,FRZB	436,150986
chr7:158800049-158800545	chr7	+	158800428	158800523	True	NM_003382	chr7	-	VIPR2	137183
chr19:58459705-58460339	chr19	+	58459812	58460255	True	NR_036508,NM_005773	chr19,chr19	+,-	LOC100128398,ZNF256	54006,-735
chr16:2834634-2834974	chr16	+	2834739	2834931	True	NM_152891,NM_001135086,NM_007108,NM_207013	chr16,chr16,chr16,chr16	-,+,-,-	PRSS33,PRSS41,TCEB2,TCEB2	1827,13554,-7442,-7442
chr7:7605612-7605897	chr7	+	7605713	7605834	True	NM_001037763,NM_019005	chr7,chr7	-,+	COL28A1,MIOS	-30253,781
chr8:144779631-144779838	chr8	+	144779676	144779796	True	NR_015445,NM_001162914	chr8,chr8	+,-	BREA2,LOC100130274	-442,10533
chr16:68014635-68014877	chr16	+	68014647	68014741	True	NM_022357,NM_001129758,NM_017803	chr16,chr16,chr16	-,-,+	DPEP3,DPEP3,DUS2L	-195,-195,42462
chr4:155700067-155702046	chr4	+	155700538	155702088	True	NM_144979,NM_021870	chr4,chr4	+,-	RBM46,FGG	338,-166636
chr7:2283951-2284294	chr7	+	2283956	2284290	True	NM_198954,NM_002452,NM_198952,NM_198950,NM_013393,NM_198948,NM_198949,NM_198953	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,-,+,+,+	NUDT1,NUDT1,NUDT1,NUDT1,FTSJ2,NUDT1,NUDT1,NUDT1	-1467,-2150,-2111,-2111,-2123,-2150,-2150,-1467
chr1:204484753-204485394	chr1	+	204484756	204485378	True	NM_001204171,NM_002646,NM_001204172,NR_024171,NM_002393	chr1,chr1,chr1,chr1,chr1	+,-,+,+,+	MDM4,PIK3C2B,MDM4,MDM4,MDM4	128,-25282,128,128,128
chr13:45559861-45560681	chr13	+	45559884	45560540	True	NM_012345,NM_018559	chr13,chr13	-,+	NUFIP1,KIAA1704	3127,3146
chr20:13612979-13613664	chr20	+	13613162	13613711	True	NM_001039375,NM_017714	chr20,chr20	+,-	C20orf7,TASP1	151960,5923
chr9:135956149-135956704	chr9	+	135956418	135956720	True	NR_001275,NM_006266	chr9,chr9	+,-	CELP,RALGDS	1205,39891
chr19:39344385-39346147	chr19	+	39344728	39344899	True	NM_001001716,NM_001533,NM_001005335	chr19,chr19,chr19	+,-,-	NFKBIB,HNRNPL,HNRNPL	45715,-4111,-1749
chr8:357431-357633	chr2	+	243031450	243031510	False	NM_005018	chr2	-	PDCD1	-230392
chr8:357431-357633	chr8	+	357436	357676	True	NM_175075,NM_183420,NM_183421,NM_012173	chr8,chr8,chr8,chr8	-,+,+,+	C8orf42,FBXO25,FBXO25,FBXO25	137705,-679,-679,-679
chr12:27933474-27933826	chr12	+	27933548	27933752	True	NM_001146221,NM_020782	chr12,chr12	-,+	LOC100287284,KLHDC5	-9339,-412
chr6:135375514-135375748	chr6	+	135375513	135375785	True	NM_001145158,NM_005375,NM_001145207,NM_006620	chr6,chr6,chr6,chr6	-,+,-,-	HBS1L,MYB,HBS1L,HBS1L	301,126667,301,301
chr4:57522986-57523587	chr4	+	57523070	57523622	True	NM_139211,NM_001145459,NM_206919	chr4,chr4,chr4	-,-,+	HOPX,HOPX,ARL9	-382,-382,-151746
chr1:156308269-156308546	chr1	+	156308369	156308509	True	NR_036564,NR_036565,NM_005998,NM_001008800,NM_144627	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	CCT3,CCT3,CCT3,CCT3,C1orf182	-163,-163,-163,-163,-1315
chr2:219473788-219475744	chr2	+	219473910	219475439	True	NM_020935,NM_032726	chr2,chr2	-,+	USP37,PLCD4	-40826,-1474
chr12:121033446-121034113	chr12	+	121033717	121034091	True	NM_001033677,NM_198202	chr12,chr12	+,-	CABP1,POP5	44330,-14516
chr1:235669791-235671004	chr1	+	235669799	235670881	True	NM_003193,NM_152490	chr1,chr1	+,-	TBCE,B3GALNT2	-139135,-2018
chr7:6896861-6897478	chr7	+	6896897	6897503	True	NM_198097,NM_173565	chr7,chr7	-,+	C7orf28B,RSPH10B	-30971,-103208
chr14:35765695-35767415	chr14	+	35765879	35767267	True	NM_002791,NM_020529	chr14,chr14	+,-	PSMA6,NFKBIA	-4368,106748
chr20:55106650-55107831	chr20	+	55107336	55107879	True	NM_001012971,NM_001013646,NM_080615	chr20,chr20,chr20	+,+,-	C20orf106,C20orf107,GCNT7	-7602,422,-6355
chr16:1478299-1478572	chr16	+	1478396	1478524	True	NM_001010878,NM_016111	chr16,chr16	-,+	C16orf91,TELO2	871,64827
chr20:56723635-56723949	chr20	+	56723674	56723881	True	NM_178456,NR_003505	chr20,chr20	+,-	C20orf85,PPP4R1L	2101,160677
chr10:1107339-1108176	chr10	+	1107390	1108218	True	NM_004508,NM_014023	chr10,chr10	-,+	IDI1,WDR37	-12329,-4666
chr2:38217006-38217377	chr2	+	38217304	38217390	True	NM_000104,NM_144713	chr2,chr2	-,+	CYP1B1,FAM82A1	85985,-39768
chr22:44966585-44966832	chr22	+	44966589	44966857	True	NR_028409,NM_032287,NR_028411,NR_028410	chr22,chr22,chr22,chr22	+,-,+,+	NCRNA00207,LDOC1L,NCRNA00207,NCRNA00207	-1420,-72584,-1420,-1420
chr20:35204115-35205198	chr20	+	35204153	35205094	True	NM_021809,NM_001199535,NM_032214,NM_001199513,NM_001199514,NM_001199515	chr20,chr20,chr20,chr20,chr20,chr20	+,+,-,+,+,+	TGIF2,TGIF2-C20ORF24,SLA2,TGIF2,TGIF2,TGIF2	-2194,-1247,69526,-2328,-2328,-1247
chr11:615067-615269	chr11	+	615094	615246	True	NM_004031,NM_000797,NM_004029,NM_001171968,NM_021924,NM_001572,NM_031264	chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,+,-,-,-,-,-	IRF7,DRD4,IRF7,CDHR5,CDHR5,IRF7,CDHR5	532,22058,803,9871,9871,803,9871
chr3:9410205-9410848	chr3	+	9410334	9410554	True	NM_001114092,NM_015453,NR_027007	chr3,chr3,chr3	+,+,-	THUMPD3,THUMPD3,LOC440944	-5676,-5676,28676
chrX:153994907-153995293	chrX	+	153994941	153995195	True	NR_002984,NM_080612,NM_001363,NR_002969,NM_001142463	chrX,chrX,chrX,chrX,chrX	+,-,+,+,+	SNORA56,GAB3,DKC1,SNORA36A,DKC1	8077,-15593,-3963,1607,-3963
chr17:39044257-39045756	chr17	+	39044587	39045787	True	NM_019010,NM_001195386	chr17,chr17	-,+	KRT20,TMEM99	-3092,-69210
chr18:55104227-55104626	chr18	+	55104227	55104665	True	NM_000140,NM_004852	chr18,chr18	-,+	FECH,ONECUT2	149354,-1361
chrX:152956185-152956748	chrX	+	152956201	152956687	True	NM_001039582,NM_001142806,NM_005629,NM_001142805	chrX,chrX,chrX,chrX	-,+,+,+	PNCK,SLC6A8,SLC6A8,SLC6A8	-16385,-1286,-2500,-2500
chr10:3215769-3216261	chr10	+	3215788	3216288	True	NM_002627,NM_014889	chr10,chr10	+,-	PFKP,PITRM1	-106087,-785
chr6:107350684-107351705	chr6	+	107351331	107351723	True	NM_001080450,NM_016487,NM_001142468,NM_001142470	chr6,chr6,chr6,chr6	-,+,+,+	BEND3,C6orf203,C6orf203,C6orf203	83963,-1975,-1975,-1975
chr17:19398393-19398629	chr17	+	19398396	19398474	True	NM_002404,NM_018242	chr17,chr17	-,+	MFAP4,SLC47A1	-107864,38692
chr6:143398101-143399347	chr6	+	143398185	143399385	True	NM_016108,NM_006734	chr6,chr6	+,-	AIG1,HIVEP2	-16221,-131847
chr17:7592118-7593357	chr17	+	7592263	7593157	True	NM_001143992,NM_001143991,NM_001143990,NM_018081,NM_000546,NM_001126114,NM_001126112,NM_001126113	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,-,-,-,-	WRAP53,WRAP53,WRAP53,WRAP53,TP53,TP53,TP53,TP53	-647,-1556,-2925,-647,-1400,-1400,-1400,-1400
chr19:13263165-13263600	chr19	+	13263175	13263489	True	NM_004907,NM_003765	chr19,chr19	+,-	IER2,STX10	-1944,-2188
chr19:18333183-18333803	chr19	+	18333305	18333421	True	NM_001098819,NM_001098818,NM_032683	chr19,chr19,chr19	-,-,+	PDE4C,PDE4C,MPV17L2	1932,3877,-29316
chr8:88017452-88018919	chr8	+	88017678	88018937	True	NM_019098,NM_173538	chr8,chr8	-,+	CNGB3,CNBD1	-261775,-139062
chr17:66094275-66094700	chr17	+	66094492	66094579	True	NM_181656,NR_027418	chr17,chr17	-,+	C17orf58,LOC100499466	-104727,3116
chr5:140735850-140736517	chr5	+	140735895	140736449	True	NM_032095,NM_018923,NM_018922,NM_032096,NM_032054,NM_018918,NM_032053,NM_005642,NM_018917	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,+,-,+	PCDHGB1,PCDHGB2,PCDHGB1,PCDHGB2,PCDHGA5,PCDHGA5,PCDHGA4,TAF7,PCDHGA4	-6119,3253,-6119,3253,7448,7448,-1179,-35544,-1179
chr2:152219549-152220098	chr2	+	152219845	152219906	True	NM_007115,NM_004688	chr2,chr2	+,-	TNFAIP6,NMI	-5795,-73415
chr1:35544308-35545140	chr1	+	35544518	35545100	True	NM_024772,NM_007167	chr1,chr1	+,-	ZMYM1,ZMYM6	-113,-46949
chr1:160177231-160178208	chr1	+	160177350	160178048	True	NM_003768,NR_028106	chr1,chr1	+,-	PEA15,DCAF8	-2276,54279
chr1:202856395-202857086	chr1	+	202856949	202857137	True	NM_002871,NR_002929	chr1,chr1	-,+	RABIF,LOC148709	1178,-26133
chr19:6392755-6393039	chr19	+	6392774	6393060	True	NM_002096,NM_032306	chr19,chr19	-,+	GTF2F1,ALKBH7	281,-20381
chr10:63500624-63501996	chr10	+	63501143	63501956	True	NM_178505,NM_173554	chr10,chr10	-,+	TMEM26,C10orf107	-287935,-78475
chr5:137912464-137913479	chr5	+	137912604	137913047	True	NM_001964,NM_004134	chr5,chr5	+,-	EGR1,HSPA9	-111474,-1286
chr17:59479005-59479438	chr17	+	59479108	59479320	True	NM_199290,NM_005994,NM_203425	chr17,chr17,chr17	-,+,+	NACA2,TBX2,C17orf82	189293,-1902,9791
chr13:47128475-47128686	chr13	+	47128481	47128731	True	NM_001164213,NM_001164211,NM_025113,NM_015116	chr13,chr13,chr13,chr13	+,+,-,+	LRCH1,LRCH1,C13orf18,LRCH1	-1236,-1236,-166846,-1236
chr17:77816110-77816527	chr17	+	77816131	77816527	True	NM_005189,NM_003655	chr17,chr17	+,-	CBX2,CBX4	-64205,-2918
chr19:51890946-51891423	chr19	+	51890957	51891379	True	NM_001161748,NM_001193623,NR_033235,NM_030657	chr19,chr19,chr19,chr19	-,-,+,-	LIM2,LOC147646,LOC100129083,LIM2	-59,2499,27780,-59
chr1:203440397-203441278	chr1	+	203440625	203441277	True	NM_002023,NM_201348,NM_002725	chr1,chr1,chr1	-,+,+	FMOD,PRELP,PRELP	-120336,3605,3605
chr9:132598054-132598293	chr9	+	132598067	132598291	True	NM_006676,NM_001110303,NM_016520,NM_001008563	chr9,chr9,chr9,chr9	+,+,-,+	USP20,USP20,C9orf78,USP20	-422,-422,-495,-361
chr19:49339774-49340015	chr19	+	49339831	49339955	True	NM_014330,NM_016246	chr19,chr19	+,-	PPP1R15A,HSD17B14	35693,29
chr8:42948328-42948559	chr8	+	42948377	42948507	True	NR_027669,NM_032237	chr8,chr8	-,+	RNF170,SGK196	-196511,149
chr7:44103803-44104045	chr7	+	44103812	44103976	True	NM_000290,NM_014063	chr7,chr7	-,+	PGAM2,DBNL	1260,-19624
chr9:125550710-125551231	chr9	+	125551001	125551231	True	NM_001001923,NM_005388	chr9,chr9	+,-	OR5C1,PDCL	-20,39754
chr14:94559810-94561421	chr14	+	94559892	94561199	True	NM_020414,NM_206949	chr14,chr14	-,+	DDX24,IFI27L1	-12334,-12304
chr12:49993676-49993964	chr12	+	49993692	49993894	True	NM_012272,NR_027450,NM_032130	chr12,chr12,chr12	+,-,-	PRPF40B,FAM186B,FAM186B	23508,5566,5589
chr9:139949259-139949575	chr9	+	139949259	139949559	True	NM_207309,NM_001246,NM_203468,NM_015392	chr9,chr9,chr9,chr9	+,-,-,-	UAP1L1,ENTPD2,ENTPD2,NPDC1	22393,-754,-754,-8583
chr17:79633026-79633305	chr17	+	79633026	79633204	True	NM_002602,NM_199287,NM_001039842,NR_026872	chr17,chr17,chr17,chr17	-,+,-,-	PDE6G,CCDC137,C17orf90,PDE6G	-9419,556,464,-9419
chr16:450067-450560	chr16	+	450177	450579	True	NM_020664,NM_021259,NM_005009	chr16,chr16,chr16	+,-,+	DECR2,TMEM8A,NME4	1278,-18227,-3036
chr4:26579411-26581142	chr4	+	26579783	26580972	True	NM_018317,NM_000730	chr4,chr4	+,-	TBC1D19,CCKAR	4573,-87741
chr10:31984237-31985460	chr10	+	31984290	31985460	True	NM_001174094,NM_018287	chr10,chr10	+,-	ZEB1,ARHGAP12	-374284,232360
chr1:1311973-1312370	chr1	+	1311989	1312389	True	NM_001127230,NM_017900,NM_001127229,NR_015434	chr1,chr1,chr1,chr1	-,-,-,+	AURKAIP1,AURKAIP1,AURKAIP1,LOC148413	-1427,-1171,-1409,22520
chr19:12807486-12808184	chr19	+	12807582	12808103	True	NM_032301,NR_002751,NM_032332	chr19,chr19,chr19	-,-,+	FBXW9,SNORD41,WDR83	-127,9279,-27116
chr6:36861722-36861937	chr6	+	36861831	36861971	True	NM_152734,NM_016059	chr6,chr6	+,-	C6orf89,PPIL1	-8249,-19031
chr2:220095101-220095551	chr2	+	220095110	220095349	True	NM_024085,NM_018089,NM_001077198,NM_001042410	chr2,chr2,chr2,chr2	-,+,-,+	ATG9A,ANKZF1,ATG9A,ANKZF1	-749,-682,-749,-551
chr19:12249556-12250504	chr19	+	12249693	12250350	True	NM_003437,NM_001203250,NM_021143	chr19,chr19,chr19	+,-,-	ZNF136,ZNF20,ZNF20	23521,933,933
chr1:153948181-153948659	chr1	+	153948229	153948639	True	NM_130898,NM_014437,NM_006694	chr1,chr1,chr1	+,-,-	CREB3L4,SLC39A1,JTB	-7883,-8041,1872
chr15:40331518-40331898	chr15	+	40331604	40331878	True	NM_001013703,NM_003134	chr15,chr15	+,-	EIF2AK4,SRP14	-105315,-215
chr2:179075393-179076222	chr2	+	179075617	179076204	True	NM_032523,NM_001077197	chr2,chr2	+,-	OSBPL6,PDE11A	-16466,-102551
chr6:126334230-126335688	chr6	+	126334780	126335317	True	NM_016063,NM_001031712	chr6,chr6	-,+	HDDC2,TRMT11	-711498,-27263
chr10:105878836-105879931	chr10	+	105879191	105879954	True	NM_000494,NM_145247,NM_001002759	chr10,chr10,chr10	-,+,+	COL17A1,MEIR5,MEIR5	-33553,1861,1974
chr20:49125097-49125803	chr20	+	49125103	49125550	True	NM_080829,NM_002827	chr20,chr20	-,+	FAM65C,PTPN1	127933,1340
chr6:43269339-43269819	chr6	+	43269343	43269781	True	NM_006672,NM_153320,NM_206922	chr6,chr6,chr6	+,+,-	SLC22A7,SLC22A7,CRIP3	-3396,-3396,6799
chr1:23359483-23359937	chr1	+	23359642	23359718	True	NR_036057,NM_001142546	chr1,chr1	+,-	MIR3115,LUZP1	11079,135687
chr1:36911134-36911473	chr1	+	36911138	36911306	True	NM_145047,NM_024676,NM_206837	chr1,chr1,chr1	-,+,-	OSCP1,SH3D21,OSCP1	4840,-138481,4840
chr5:180286667-180287578	chr5	+	180286671	180287543	True	NR_027183,NM_152283,NM_001172638	chr5,chr5,chr5	+,-,-	LOC729678,ZFP62,ZFP62	-29764,793,793
chr1:212002778-212003449	chr1	+	212002851	212003180	True	NM_016448,NM_014873	chr1,chr1	+,-	DTL,LPGAT1	205738,987
chrX:48214819-48215414	chrX	+	48215096	48215286	True	NM_175711,NM_021014,NM_001034832	chrX,chrX,chrX	-,-,+	SSX3,SSX3,SSX4B	908,908,27681
chr12:117803190-117804488	chr12	+	117803361	117804303	True	NM_000620,NM_001204218,NM_153348	chr12,chr12,chr12	-,-,+	NOS1,NOS1,FBXW8	-3754,-3754,-454651
chr4:143767682-143767886	chr4	+	143767763	143767883	True	NM_001101669,NM_032557,NM_003866	chr4,chr4,chr4	-,+,-	INPP4B,USP38,INPP4B	-159,338186,-159
chr2:202483738-202483975	chr2	+	202483773	202483981	True	NM_001168217,NM_001168216,NM_001168221,NM_152525,NM_018571	chr2,chr2,chr2,chr2,chr2	-,-,-,-,+	ALS2CR11,ALS2CR11,ALS2CR11,ALS2CR11,STRADB	-26,-26,-26,-26,-167432
chrX:70836835-70837078	chrX	+	70836842	70837054	True	NM_001142797,NM_052957,NM_001504	chrX,chrX,chrX	-,+,-	CXCR3,ACRC,CXCR3	1363,-39019,1363
chr10:29105912-29106236	chr10	+	29106109	29106267	True	NR_033805,NM_012342	chr10,chr10	-,+	LOC220906,BAMBI	-284826,-139736
chr10:50604516-50604750	chr10	+	50604534	50604774	True	NM_001080520,NM_199459	chr10,chr10	-,+	DRGX,C10orf71	-4627,-97398
chr8:8749608-8749834	chr8	+	8749614	8749824	True	NM_153332,NM_004225	chr8,chr8	+,-	ERI1,MFHAS1	110489,1357
chr8:103565577-103566968	chr8	+	103565619	103566859	True	NM_024410,NM_001032282	chr8,chr8	+,-	ODF1,KLF10	-1823,99373
chr19:29412179-29413540	chr19	+	29412189	29413537	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	42500,290649
chr19:46731939-46733744	chr19	+	46732079	46733769	True	NM_198541,NM_207393	chr19,chr19	+,-	IGFL1,IGFL3	149,-104148
chr2:27345855-27346438	chr2	+	27345908	27346210	True	NM_032604,NM_001166240,NM_006569,NM_001166239	chr2,chr2,chr2,chr2	+,-,-,-	ABHD1,CGREF1,CGREF1,CGREF1	446,-3913,-3913,-4135
chr12:92538770-92539035	chr12	+	92538860	92539050	True	NR_027932,NM_001731	chr12,chr12	+,-	CLLU1,BTG1	276256,673
chr19:29415731-29416681	chr19	+	29415740	29416705	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	39332,287490
chr5:179049566-179049857	chr5	+	179049738	179049880	True	NM_005520,NM_001040452	chr5,chr5	-,+	HNRNPH1,RUFY1	892,-63060
chr5:176428873-176429656	chr5	+	176429329	176429478	True	NM_001199297,NM_012279,NM_016290,NM_001199298	chr5,chr5,chr5,chr5	-,+,-,-	UIMC1,ZNF346,UIMC1,UIMC1	4359,20218,4022,4374
chr9:13215066-13216169	chr9	+	13215249	13216213	True	NM_203403,NM_003829	chr9,chr9	+,-	C9orf150,MPDZ	-440299,34202
chr15:63245908-63246294	chr15	+	63245932	63246300	True	NM_000366,NM_015920	chr15,chr15	+,-	TPM1,RPS27L	88537,203491
chr5:138531369-138531846	chr5	+	138531429	138531573	True	NM_001194954,NM_001037633,NM_022464	chr5,chr5,chr5	+,-,-	MATR3,SIL1,SIL1	77867,2542,2542
chr6:25958336-25959039	chr6	+	25958364	25958970	True	NM_006355,NM_005835	chr6,chr6	+,-	TRIM38,SLC17A2	4100,-27418
chrX:68724106-68724382	chrX	+	68724244	68724406	True	NM_145119,NM_015686	chrX,chrX	-,+	PJA1,FAM155B	-338879,671
chr9:74626481-74627356	chr9	+	74626669	74627405	True	NM_182505,NM_001128618	chr9,chr9	+,-	C9orf85,C9orf57	-100304,48166
chr6:159419742-159420409	chr6	+	159419990	159420366	True	NM_031924,NM_001195032	chr6,chr6	-,+	RSPH3,C6orf99	882,-110422
chr17:41795173-41796372	chr17	+	41795295	41796271	True	NM_025237,NM_001136483	chr17,chr17	-,+	SOST,C17orf105	39935,61531
chr22:21870695-21870928	chr22	+	21870749	21870902	True	NR_003700,NM_003347	chr22,chr22	-,+	PI4KAP2,UBE2L3	929,51054
chr22:21870695-21870928	chr22	+	20426772	20426925	False	NR_003563,NR_026919	chr22,chr22	-,+	PI4KAP1,LOC150197	-28077,-232968
chr22:21870695-21870928	chr22	-	21772563	21772719	False	NM_015094,NR_003700	chr22,chr22	+,-	HIC2,PI4KAP2	-922,99111
chr2:64773117-64774105	chr2	+	64773345	64773887	True	NM_014755,NM_203437	chr2,chr2	-,+	SERTAD2,AFTPH	107209,-21965
chr8:8004659-8006324	chr8	+	8004992	8005728	True	NR_031689,NR_024362	chr8,chr8	-,+	MIR548I3,FLJ10661	-58381,80363
chr8:8004659-8006324	chr8	-	12374966	12375702	False	NR_026789,NM_001137610	chr8,chr8	+,-	FAM66A,FAM86B2	-155495,-81114
chr10:48249782-48250181	chr10	+	48249912	48250021	True	NM_001137549,NM_001137548,NM_001098845,NM_001137556,NM_001040084,NM_002900	chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,-	FAM25G,FAM25C,ANXA8L1,FAM25B,ANXA8,RBP3	-2301,-2301,5285,-2301,5203,141027
chr10:48249782-48250181	chr10	+	88782269	88782383	False	NM_024756,NM_001146157	chr10,chr10	-,+	MMRN2,FAM25A	-64844,-2338
chr10:48249782-48250181	chr10	-	49205465	49205725	False	NM_001137549,NM_001137548,NM_002750,NM_001137556	chr10,chr10,chr10,chr10	-,-,+,-	FAM25G,FAM25C,MAPK8,FAM25B	2327,2327,403961,2327
chr10:48249782-48250181	chr10	+	47742594	47742703	False	NR_024495,NM_001630	chr10,chr10	-,+	LOC642826,ANXA8L2	-499100,4216
chr10:48249782-48250181	chr10	-	47179328	47179437	False	NM_001137549,NM_001137548,NM_001098845,NM_001137556,NM_001040084,NM_005972	chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,-,+	FAM25G,FAM25C,ANXA8L1,FAM25B,ANXA8,PPYR1	2301,2301,-5288,2301,-5206,-95852
chr14:81714658-81714930	chr14	+	81714697	81714793	True	NM_201595,NM_000369	chr14,chr14	-,+	GTF2A1,TSHR	-27122,-292879
chr11:62436754-62437973	chr11	+	62436922	62437978	True	NM_015853,NR_004390,NM_001043229,NM_001085372,NM_024099	chr11,chr11,chr11,chr11,chr11	-,+,+,+,-	UBXN1,SNORA57,METTL12,C11orf83,C11orf48	8603,-4083,-4198,1147,1317
chr19:43772023-43773014	chr19	+	43772042	43772765	True	NR_026881,NM_002784	chr19,chr19	+,-	PRG1,PSG9	80442,968
chr9:140096670-140097898	chr9	+	140096894	140097787	True	NM_001128228,NM_001144028,NM_001144026,NM_001144027,NM_053045,NM_014434	chr9,chr9,chr9,chr9,chr9,chr9	-,+,+,+,-,+	TPRN,NDOR1,NDOR1,NDOR1,TMEM203,NDOR1	-1731,2331,2331,2331,2353,2331
chr12:50105841-50107214	chr12	+	50105956	50107265	True	NM_198900,NM_175736,NM_003217	chr12,chr12,chr12	-,-,+	FMNL3,FMNL3,TMBIM6	-4759,-4759,28027
chr2:75427091-75427487	chr2	+	75427113	75427435	True	NM_015727,NM_019896,NM_001058	chr2,chr2,chr2	-,+,-	TACR1,POLE4,TACR1	-468,-241389,-468
chr10:96953951-96954274	chr10	+	96954036	96954290	True	NM_207321,NM_020992	chr10,chr10	+,-	C10orf129,PDLIM1	-131,96541
chr15:41709948-41710929	chr15	+	41710041	41710415	True	NM_016013,NM_015138	chr15,chr15	-,+	NDUFAF1,RTF1	-15399,-790
chr22:20459521-20459931	chr22	+	20459637	20459959	True	NM_015672,NR_026919	chr22,chr22	-,+	RIMBP3,LOC150197	1877,-265833
chr22:20459521-20459931	chr22	-	21739489	21739811	False	NM_001128635,NR_003700,NM_001128633	chr22,chr22,chr22	+,-,+	RIMBP3B,PI4KAP2,RIMBP3C	-1500,132019,-1877
chr22:20459521-20459931	chr22	+	21903601	21903923	False	NM_001128635,NM_003347,NM_001128633	chr22,chr22,chr22	-,+,-	RIMBP3B,UBE2L3,RIMBP3C	1500,18033,1877
chr20:62437421-62438294	chr20	+	62437442	62437975	True	NM_080622,NM_025224	chr20,chr20	+,-	ABHD16B,ZBTB46	54590,-586
chr5:97549284-97549665	chr5	+	97549355	97549693	True	NM_001012761,NR_033932	chr5,chr5	+,-	RGMB,FLJ35946	555305,559145
chr7:27163415-27163877	chr7	+	27163577	27163917	True	NM_030661,NM_153631,NR_002795,NM_002141	chr7,chr7,chr7,chr7	-,-,+,-	HOXA3,HOXA3,HOXA11-AS1,HOXA4	-4363,2772,61109,6532
chr2:111437031-111437725	chr2	+	111437270	111437648	True	NM_004336,NM_001142807	chr2,chr2	-,+	BUB1,ACOXL	-1586,52501
chr5:140166532-140167282	chr5	+	140166538	140167128	True	NM_031410,NM_031411,NM_002109,NM_031495,NM_018900,NM_018905	chr5,chr5,chr5,chr5,chr5,chr5	+,+,-,+,+,+	PCDHA1,PCDHA1,HARS,PCDHA2,PCDHA1,PCDHA2	-713,-713,-95567,7315,-713,7315
chr11:76379313-76380622	chr11	+	76379387	76380395	True	NM_015516,NM_001128922,NM_005512	chr11,chr11,chr11	+,-,-	TSKU,LRRC32,LRRC32	113889,1446,699
chr11:7983941-7984879	chr11	+	7984076	7984898	True	NM_003754,NM_176821	chr11,chr11	+,-	EIF3F,NLRP10	23968,211
chr1:156647097-156648620	chr1	+	156647096	156648509	True	NM_021948,NM_006617	chr1,chr1	+,-	BCAN,NES	-35407,93
chr1:40029579-40030130	chr1	+	40029620	40030118	True	NR_003929,NM_181809,NR_002983	chr1,chr1,chr1	-,+,-	PPIEL,BMP8A,SNORA55	-4250,-72353,3114
chr9:77114614-77115224	chr9	+	77114626	77115176	True	NM_006914,NM_001177311	chr9,chr9	+,-	RORB,TRPM6	-2425,387137
chr19:42789769-42791262	chr19	+	42790058	42791203	True	NM_015125,NM_002573	chr19,chr19	+,-	CIC,PAFAH1B3	-1292,15643
chr6:111370479-111371121	chr6	+	111370706	111371106	True	NM_018593,NR_002932	chr6,chr6	+,-	SLC16A10,GSTM2P1	37674,-1949
chr15:69460491-69461030	chr15	+	69460640	69460872	True	NM_006305,NM_015554	chr15,chr15	-,+	ANP32A,GLCE	-347379,-7722
chr22:21022897-21023302	chr22	+	21023007	21023287	True	NM_002650,NR_024592	chr22,chr22	-,+	PI4KA,POM121L4P	65718,20555
chrX:44202896-44203594	chrX	+	44203268	44203436	True	NM_022076,NM_025184	chrX,chrX	+,-	DUSP21,EFHC2	499812,-345
chr5:68856675-68857096	chr5	+	68856873	68857083	True	NR_027439,NM_001042490,NM_001098728	chr5,chr5,chr5	-,+,+	LOC100272216,GTF2H2D,GTF2H2C	71995,-852,-875
chr5:68856675-68857096	chr5	+	69712066	69712192	False	NR_033417,NR_033968	chr5,chr5	+,-	GTF2H2B,LOC100049076	-921,139008
chr5:68856675-68857096	chr5	-	70362505	70362631	False	NM_022877,NM_001515	chr5,chr5	+,-	SMN2,GTF2H2	-141788,917
chrX:28633164-28634591	chrX	+	28633644	28634476	True	NM_014271,NM_001017930	chrX,chrX	+,-	IL1RAPL1,DCAF8L1	-28014,-634078
chr1:109854174-109856171	chr1	+	109854425	109856030	True	NM_001408,NM_001010985	chr1,chr1	+,-	CELSR2,MYBPHL	-61835,-4762
chr1:224368519-224370068	chr1	+	224368622	224369735	True	NM_003676,NR_031574	chr1,chr1	+,-	DEGS1,MIR320B2	1192,75158
chr1:32574462-32574861	chr1	+	32574470	32574782	True	NM_012316,NM_019118	chr1,chr1	+,-	KPNA6,TMEM234	-877,113194
chr12:9887206-9887582	chr12	+	9887287	9887597	True	NM_172004,NM_001197319	chr12,chr12	-,+	CLECL1,CLEC2D	-1427,-65014
chr6:164726329-164727243	chr6	+	164726453	164726893	True	NM_206855,NR_037593	chr6,chr6	+,-	QKI,LOC100526820	-890836,-891471
chr3:50382043-50382490	chr3	+	50382064	50382461	True	NM_015896,NM_007022,NM_006545,NM_170712,NM_170713,NM_007182,NM_170714	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-,-	ZMYND10,CYB561D2,NPRL2,RASSF1,RASSF1,RASSF1,RASSF1	745,5835,6075,-6400,-7169,-3697,-3697
chr1:200992900-200993230	chr1	+	200993077	200993229	True	NM_001142569,NM_017596	chr1,chr1	+,-	C1orf106,KIF21B	-129129,-249
chr13:28709959-28710178	chr13	+	28710022	28710100	True	NR_029383,NM_175854	chr13,chr13	-,+	LOC100288730,PAN3	3261,2542
chr5:80531390-80532775	chr5	+	80531536	80532672	True	NM_001099736,NM_001099735,NM_001825,NR_034121	chr5,chr5,chr5,chr5	+,+,+,-	CKMT2,CKMT2,CKMT2,LOC100131067	-2454,-2454,-2454,64780
chr16:57770221-57770648	chr16	+	57770306	57770608	True	NM_001130099,NM_005886	chr16,chr16	-,+	KIFC3,KATNB1	61371,-697
chr16:90115595-90116941	chr16	+	90115627	90116641	True	NR_027336,NR_027335,NR_023348	chr16,chr16,chr16	-,-,+	LOC100130015,LOC100130015,GAS8	-1436,-1594,-26671
chr20:62668515-62669351	chr20	+	62668767	62669169	True	NR_027687,NR_027686,NM_018419	chr20,chr20,chr20	+,+,-	NCRNA00176,NCRNA00176,SOX18	-3121,-3121,11860
chr19:40972171-40972436	chr19	+	40972195	40972432	True	NM_000713,NM_020971	chr19,chr19	-,+	BLVRB,SPTBN4	-470,693
chr3:49966359-49966740	chr3	+	49966708	49966770	True	NM_001167582,NM_032355,NM_001142501	chr3,chr3,chr3	+,-,-	RBM6,MON1A,MON1A	10706,725,725
chr10:65031231-65031591	chr10	+	65031231	65031613	True	NM_004241,NM_030759	chr10,chr10	-,+	JMJD1C,NRBF2	-2249,-138282
chr19:46418847-46419911	chr19	+	46418931	46419898	True	NM_004497,NM_001029861	chr19,chr19	+,-	FOXA3,NANOS2	-51466,-895
chr15:42071700-42072160	chr15	+	42071895	42072107	True	NR_036195,NM_014994,NM_001128608	chr15,chr15,chr15	-,+,+	MIR4310,MAPKBP1,MAPKBP1	86704,-5327,-5327
chr1:29062687-29062947	chr1	+	29062686	29062918	True	NM_001173128,NM_001172828,NM_005644,NM_016258	chr1,chr1,chr1,chr1	+,+,-,+	YTHDF2,YTHDF2,TAF12,YTHDF2	214,533,-93082,217
chr6:26429839-26430739	chr6	+	26429849	26430507	True	NR_027795,NM_003543	chr6,chr6	+,-	BTN2A3,HIST1H4H	-8281,-144122
chr2:127412489-127412719	chr2	+	127412586	127412712	True	NM_002101,NM_016815,NM_139348	chr2,chr2,chr2	+,+,-	GYPC,GYPC,BIN1	971,971,452202
chr21:45432940-45434377	chr21	+	45433177	45434197	True	NR_026961,NM_003274	chr21,chr21	-,+	LOC284837,TRAPPC10	-200729,-1029
chr2:73932530-73933207	chr2	+	73932578	73933156	True	NM_016347,NR_003683	chr2,chr2	-,+	NAT8B,ALMS1P	-4111,-60595
chr22:25370097-25370750	chr22	+	25370136	25370570	True	NM_001145206,NM_001001663	chr22,chr22	+,-	KIAA1671,TMEM211	53370,-34822
chr15:25459480-25459698	chr15	+	25459497	25459577	True	NR_003315,NR_003314,NR_003313,NR_003495,NR_003496,NR_003497,NR_022010,NR_003358,NR_003344,NR_003351,NM_130838,NR_003342,NR_003343,NR_003303,NR_003307,NR_003312	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,+,-,+,+,+,+,+	SNORD115-23,SNORD115-22,SNORD115-21,SNORD115-24,HBII-52-27,HBII-52-28,PAR4,SNORD115-43,SNORD115-29,SNORD115-36,UBE3A,SNORD115-25,SNORD115-26,SNORD115-11,SNORD115-15,SNORD115-20	-2605,-4483,-8139,-742,6072,7923,-2709,8815,8815,8815,191126,1110,4186,8815,-8139,-8139
chr2:198318787-198320403	chr2	+	198318923	198320283	True	NM_025147,NM_001005526	chr2,chr2	+,-	COQ10B,SF3B1	-744,-19152
chr3:143689970-143690244	chr3	+	143690035	143690183	True	NM_173653,NM_173552,NM_001134470	chr3,chr3,chr3	-,+,+	SLC9A9,C3orf58,C3orf58	-122662,456,1983
chr4:83483327-83483756	chr4	+	83483353	83483749	True	NM_001080506,NM_021204	chr4,chr4	-,+	TMEM150C,ENOPH1	-227,-131678
chr12:100966446-100966860	chr12	+	100966730	100966896	True	NM_174942,NM_152317	chr12,chr12	+,-	GAS2L3,DEPDC4	592,-305873
chr20:35484898-35485472	chr20	+	35485110	35485456	True	NM_080628,NM_080627,NM_199181	chr20,chr20,chr20	+,-,-	C20orf118,KIAA0889,KIAA0889	19113,6681,2870
chr20:61493989-61494252	chr20	+	61494173	61494297	True	NM_006602,NM_080750	chr20,chr20	-,+	TCFL5,DPH3P1	-1058,-17749
chr14:105546192-105546947	chr14	+	105546618	105546852	True	NM_174891,NM_013345	chr14,chr14	+,-	C14orf79,GPR132	-94053,-14864
chr3:114011431-114013193	chr3	+	114011519	114013054	True	NR_030293,NM_173799	chr3,chr3	-,+	MIR568,TIGIT	22412,-36
chr11:3873665-3875124	chr11	+	3874166	3875115	True	NM_001665,NM_003156	chr11,chr11	-,+	RHOG,STIM1	-11953,1817
chr1:1110885-1111228	chr1	+	1110890	1111104	True	NR_029834,NM_153254,NR_029957,NM_004195,NM_001130045,NR_029639	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,-,+,+	MIR200A,TTLL10,MIR429,TNFRSF18,TTLL10,MIR200B	-7698,3972,-6556,31035,-1655,-8457
chr2:97174813-97175270	chr2	+	97174828	97175210	True	NM_212481,NR_026875	chr2,chr2	+,-	ARID5A,NEURL3	27253,-982
chr8:12616137-12616824	chr8	+	12616348	12616717	True	NM_152271,NR_037495	chr8,chr8	-,+	LONRF1,MIR3926-2	-3356,-31660
chr9:86520326-86522127	chr9	+	86520568	86521346	True	NM_017576,NM_024945	chr9,chr9	-,+	KIF27,RMI1	15046,74290
chr15:23444576-23444901	chr15	+	23444703	23444877	True	NR_002824,NR_033350	chr15,chr15	-,+	HERC2P2,GOLGA8E	-66444,-9684
chr15:23444576-23444901	chr15	+	28633450	28633624	False	NM_004667,NR_033351,NR_033353	chr15,chr15,chr15	-,+,+	HERC2,GOLGA8F,GOLGA8G	-66155,-9717,-9717
chr15:23444576-23444901	chr15	-	28768303	28768477	False	NR_036443,NR_033351,NR_033353	chr15,chr15,chr15	+,-,-	HERC2P9,GOLGA8F,GOLGA8G	131110,9716,9716
chr15:23444576-23444901	chr15	+	20777305	20777479	False	NM_001145004,NR_027411	chr15,chr15	-,+	GOLGA6L6,GOLGA8C	-30191,-9682
chr15:23444576-23444901	chr15	-	22705711	22706074	False	NR_027407,NM_001001413	chr15,chr15	-,+	GOLGA8DP,GOLGA6L1	9704,30171
chr14:67721587-67722494	chr14	+	67721903	67722357	True	NM_022474,NM_015994	chr14,chr14	+,-	MPP5,ATP6V1D	-13938,104424
chr2:152955731-152957061	chr2	+	152955769	152956977	True	NM_000726,NM_001005746,NM_052905,NM_001145798	chr2,chr2,chr2,chr2	-,-,+,-	CACNB4,CACNB4,FMNL2,CACNB4	-176,-534,234773,-176
chr10:135342641-135342859	chr10	+	135342653	135342827	True	NM_000773,NM_001143763	chr10,chr10	+,-	CYP2E1,SYCE1	-1837,36361
chr4:71461167-71461511	chr4	+	71461242	71461546	True	NM_144646,NM_016519	chr4,chr4	-,+	IGJ,AMBN	70856,-3293
chr11:69185202-69185515	chr11	+	69185247	69185509	True	NM_153451,NM_138768	chr11,chr11	-,+	ORAOV1,MYEOV	304706,-123676
chr21:34864250-34864738	chr21	+	34864275	34864596	True	NM_032195,NM_001040192,NM_017833	chr21,chr21,chr21	+,-,-	SON,DNAJC28,DNAJC28	50753,-252,-485
chr2:204104129-204104473	chr2	+	204104174	204104488	True	NM_213589,NM_177538	chr2,chr2	-,+	RAPH1,CYP20A1	295620,-1062
chr9:69198913-69200658	chr2	-	114259162	114259215	True	NM_012184,NR_024005	chr2,chr2	+,-	FOXD4L1,DDX11L2	-2555,99991
chr9:69198913-69200658	chr9	+	69199187	69200207	False	NM_001085476,NM_001098805	chr9,chr9	-,+	FOXD4L6,ANKRD20A4	2047,181773
chr9:69198913-69200658	chr9	+	115720	115773	False	NM_203447,NM_207305	chr9,chr9	+,-	DOCK8,FOXD4	99091,2697
chr10:1065650-1065957	chr10	+	1065649	1065994	True	NM_033261,NR_024628,NR_024629,NR_027708,NR_027709	chr10,chr10,chr10,chr10,chr10	-,+,+,+,+	IDI2,IDI2-AS1,IDI2-AS1,IDI2-AS1,IDI2-AS1	5856,2582,2582,2582,2582
chr14:42078675-42079303	chr14	+	42078684	42079144	True	NM_152447,NM_203301	chr14,chr14	+,-	LRFN5,FBXO33	-1971,-2176980
chr12:49522704-49523316	chr12	+	49522793	49523057	True	NM_032704,NM_006082	chr12,chr12	+,-	TUBA1C,TUBA1B	135807,2297
chr16:30936745-30937089	chr16	+	30936804	30937072	True	NM_001099784,NR_024348	chr16,chr16	+,-	FBXL19,FBXL19-AS1	-959,-2214
chr12:4770368-4771731	chr12	+	4770571	4771771	True	NM_006422,NM_005002	chr12,chr12	-,+	AKAP3,NDUFA9	-16228,-12365
chr2:169926844-169927294	chr2	+	169926860	169927297	True	NM_199204,NM_003742,NM_001142270,NM_005771	chr2,chr2,chr2,chr2	+,-,+,+	DHRS9,ABCB11,DHRS9,DHRS9	-3381,-39027,1787,-5627
chr3:194028142-194030138	chr3	+	194028324	194029578	True	NR_024480,NM_005524	chr3,chr3	-,+	LOC100131551,HES1	1065,-174444
chr1:22888162-22889227	chr1	+	22888177	22888871	True	NM_020526,NR_036214,NM_001006943	chr1,chr1,chr1	+,-,+	EPHA8,MIR4253,EPHA8	1132,300898,1132
chr1:35489516-35490874	chr1	+	35489625	35490800	True	NM_024772,NM_007167	chr1,chr1	+,-	ZMYM1,ZMYM6	54171,6819
chr1:18088359-18088657	chr1	+	18088366	18088706	True	NM_018715,NM_030812	chr1,chr1	-,+	RCC2,ACTL8	-322146,-6609
chr1:247494434-247494714	chr1	+	247494437	247494633	True	NM_032752,NM_173858	chr1,chr1	-,+	ZNF496,VN1R5	462,-75114
chr5:68508574-68509232	chr5	+	68508814	68508881	True	NM_033281,NM_176816	chr5,chr5	+,-	MRPS36,CCDC125	4691,107580
chr11:43335561-43336145	chr11	+	43335749	43336138	True	NR_024625,NR_033868,NM_006595,NM_001142930,NM_001142931	chr11,chr11,chr11,chr11,chr11	+,-,+,+,+	API5,LOC399881,API5,API5,API5	-2299,-44830,-2299,-2299,-2299
chr17:8665620-8666834	chr17	+	8665723	8666883	True	NM_004822,NM_001128076	chr17,chr17	+,-	NTN1,SPDYE4	257975,-3846
chr12:21644499-21646054	chr12	+	21644640	21646046	True	NM_016072,NM_002907,NM_032941	chr12,chr12,chr12	+,-,-	GOLT1B,RECQL,RECQL	8652,8615,8615
chr16:67597532-67598662	chr16	+	67597646	67598692	True	NM_001191022,NM_001138,NM_006565	chr16,chr16,chr16	+,-,+	CTCF,AGRP,CTCF	-1387,-79930,-1387
chr8:127777276-127777513	chr8	+	127777275	127777558	True	NM_001159542,NM_174911	chr8,chr8	+,-	POU5F1B,FAM84B	650298,-206564
chr9:35619063-35619330	chr9	+	35619066	35619239	True	NM_001782,NM_006285	chr9,chr9	-,+	CD72,TESK1	-642,-13836
chr12:118813743-118814078	chr12	+	118813747	118814067	True	NM_022491,NM_016281	chr12,chr12	+,-	SUDS3,TAOK3	290,-2997
chr1:155148106-155148481	chr1	+	155148154	155148528	True	NM_025058,NM_173852	chr1,chr1	+,-	TRIM46,KRTCAP2	-1845,-2350
chr11:57296369-57297912	chr11	+	57296501	57297619	True	NM_012456,NM_001105565	chr11,chr11	-,+	TIMM10,SMTNL1	663,12494
chr16:87985592-87985979	chr16	+	87985724	87985885	True	NM_001173542,NM_001173541,NM_001173539,NM_017869,NM_079837,NM_001173540,NM_001739	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,+,-	BANP,BANP,BANP,BANP,BANP,BANP,CA5A	7591,-740,-740,-740,-740,-740,-15612
chrX:102628324-102629931	chrX	+	102628515	102629861	True	NM_206915,NM_206917,NM_014380,NM_032621	chrX,chrX,chrX,chrX	+,+,+,-	NGFRAP1,NGFRAP1,NGFRAP1,BEX2	1406,1406,2247,-62541
chr17:32597730-32598267	chr17	+	32597784	32598207	True	NM_006273,NM_002981	chr17,chr17	+,-	CCL7,CCL1	-595,92106
chr1:149761325-149763045	chr1	+	149761391	149762654	True	NM_001161334,NM_000566	chr1,chr1	-,+	HIST2H2BF,FCGR1A	21324,-7192
chr1:149761325-149763045	chr1	+	149376455	149377717	False	NR_027484,NM_001024599	chr1,chr1	+,-	FCGR1C,HIST2H2BF	-7212,21562
chr1:149761325-149763045	chr1	-	120927555	120928833	False	NM_001004340,NR_027337,NM_001017986	chr1,chr1,chr1	-,+,-	FCGR1B,HIST2H2BA,FCGR1B	7161,-21572,7161
chr16:24547413-24548234	chr16	+	24547509	24548085	True	NM_032626,NM_001006634,NM_018703,NM_006910	chr16,chr16,chr16,chr16	+,-,+,+	RBBP6,ARHGAP17,RBBP6,RBBP6	2822,478640,2822,2822
chr11:57154418-57155430	chr11	+	57154446	57155332	True	NM_002728,NM_006093,NM_002559	chr11,chr11,chr11	-,-,+	PRG2,PRG3,P2RX3	2848,-5823,-48555
chr3:195888274-195889028	chr3	+	195888775	195888835	True	NR_034088,NM_001039617	chr3,chr3	+,-	LOC401109,ZDHHC19	-19322,49521
chr3:51980062-51980895	chr3	+	51980068	51980894	True	NM_080865,NM_005485,NM_001003931,NM_004704	chr3,chr3,chr3,chr3	+,+,+,-	GPR62,PARP3,PARP3,RRP9	8435,-3758,-3758,-4146
chrX:154568780-154569581	chrX	+	154568819	154569127	True	NM_001017990,NM_001289	chrX,chrX	+,-	H2AFB1,CLIC2	41300,-4833
chrX:154568780-154569581	chrX	-	154731085	154731393	False	NM_080720,NR_036260	chrX,chrX	-,+	H2AFB3,MIR1184-3	-41489,-43958
chr10:81206523-81206727	chr10	+	81206625	81206693	True	NM_001099692,NM_153367	chr10,chr10	+,-	EIF5AL1,ZCCHC24	65663,-1242
chr19:10831771-10831991	chr19	+	10831774	10831842	True	NR_030368,NM_001005360,NM_001005362,NM_004945,NM_001005361,NR_024333,NM_001190716	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,-,+	MIR638,DNM2,DNM2,DNM2,DNM2,LOC147727,DNM2	-2745,-3096,-3096,-3096,-3096,-67226,-3096
chr2:23665442-23667318	chr2	+	23665468	23667060	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	482924,-57221
chr21:47876861-47877298	chr21	+	47877082	47877144	True	NM_206889,NM_001146114,NM_001146115,NM_001146116,NM_206890,NM_206891,NM_015151,NM_058180	chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21	+,+,+,+,+,+,+,-	DIP2A,DIP2A,DIP2A,DIP2A,DIP2A,DIP2A,DIP2A,C21orf58	1717,1717,1717,1717,1717,1717,1717,-133297
chr2:23624619-23625018	chr2	+	23624656	23624912	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	525072,-16409
chr7:107643331-107643555	chr7	+	107643365	107643575	True	NM_002291,NM_000108	chr7,chr7	-,+	LAMB1,DLD	279,-111830
chr21:43640817-43641144	chr21	+	43640819	43641049	True	NM_207174,NM_004915,NM_003226,NM_016818,NM_207629	chr21,chr21,chr21,chr21,chr21	+,+,-,+,+	ABCG1,ABCG1,TFF3,ABCG1,ABCG1	-862,-1603,94707,-1603,-4683
chr9:136148502-136148760	chr9	+	136148522	136148678	True	NM_000972,NM_020469	chr9,chr9	+,-	RPL7A,ABO	66390,2002
chr9:117374033-117374470	chr9	+	117374269	117374473	True	NM_153045,NM_001199233	chr9,chr9	+,-	C9orf91,LOC100505478	-614,69946
chr13:52723117-52723724	chr13	+	52723643	52723709	True	NM_152720,NM_021645	chr13,chr13	-,+	NEK3,UTP14C	10011,-124867
chr18:71959393-71960443	chr18	+	71959562	71960254	True	NM_001914,NM_148923,NM_001190807,NM_001174123	chr18,chr18,chr18,chr18	-,-,-,+	CYB5A,CYB5A,CYB5A,DKFZP781G0119	-311,-311,-311,22855
chr12:53772669-53773054	chr12	+	53772754	53773006	True	NM_138473,NM_001173467,NM_003109	chr12,chr12,chr12	+,-,+	SP1,SP7,SP1	972,-42750,1421
chr18:76828368-76828650	chr18	+	76828433	76828547	True	NM_198531,NM_001146343	chr18,chr18	+,-	ATP9B,PQLC1	849,883156
chr8:57030285-57030507	chr8	+	57030420	57030514	True	NM_005372,NM_001011667	chr8,chr8	-,+	MOS,CHCHD7	-3879,93800
chrY:10038021-10038449	chrY	+	10038137	10038345	True	NR_003593,NR_003589	chrY,chrY	+,-	TTTY23B,TTTY1B	-289781,-426209
chr1:1185764-1186312	chr1	+	1185898	1186244	True	NM_080605,NM_001014980	chr1,chr1	+,-	B3GALT6,FAM132A	-18329,-3796
chr17:10368863-10369182	chr17	+	10368931	10369038	True	NM_017533,NM_020233	chr17,chr17	-,+	MYH4,C17orf48	3895,231888
chr4:184401087-184402981	chr4	+	184401105	184402907	True	NR_033995,NM_001564	chr4,chr4	-,+	LOC389247,ING2	22811,23312
chr2:220283399-220283606	chr2	+	220283441	220283649	True	NM_012100,NM_001927	chr2,chr2	-,+	DNPEP,DES	-30779,-393
chr13:67803279-67803761	chr13	+	67803278	67803804	True	NR_002717,NM_020403,NM_203487	chr13,chr13,chr13	+,-,-	ATXN8OS,PCDH9,PCDH9	2877540,714,714
chr3:10027500-10028393	chr3	+	10027681	10028288	True	NM_018447,NM_033084	chr3,chr3	-,+	TMEM111,FANCD2	284,39824
chr4:73006397-73008266	chr4	+	73008250	73008312	True	NM_053036,NM_001204306	chr4,chr4	+,-	NPFFR2,GC	-103452,-337013
chr4:3465943-3466244	chr4	+	3465999	3466207	True	NM_001164673,NM_002337,NM_173660	chr4,chr4,chr4	+,-,+	DOK7,LRPAP1,DOK7	-1017,68067,-1017
chr3:72948823-72950159	chr3	+	72949050	72949550	True	NM_001080393,NM_018130	chr3,chr3	+,-	GXYLT2,SHQ1	-11717,-51452
chr17:37713474-37713923	chr17	+	37713495	37713972	True	NM_032192,NM_006160	chr17,chr17	+,-	PPP1R1B,NEUROD2	69206,50254
chr8:20113925-20115450	chr8	+	20113965	20115097	True	NM_021020,NM_001693	chr8,chr8	-,+	LZTS1,ATP6V1B2	-1162,-59312
chr4:22511555-22512214	chr4	+	22511702	22512248	True	NM_001128432,NM_145290	chr4,chr4	+,-	GBA3,GPR125	182299,5474
chr17:39637323-39638220	chr17	+	39637845	39638247	True	NM_005801,NM_003771,NM_002280	chr17,chr17,chr17	+,-,-	EIF1,KRT36,KRT35	206879,7919,-453
chr19:45541965-45542317	chr19	+	45542146	45542342	True	NM_145288,NM_007056	chr19,chr19	-,+	ZNF296,CLASRP	37396,31
chr9:135935848-135936284	chr9	+	135935847	135936173	True	NM_001807,NM_006266	chr9,chr9	+,-	CEL,RALGDS	1191,60438
chr9:135935848-135936284	chr9	+	135956588	135956740	False	NR_001275,NM_006266	chr9,chr9	+,-	CELP,RALGDS	1185,39959
chr5:149571084-149572304	chr5	+	149571306	149572304	True	NM_002609,NM_014228	chr5,chr5	-,+	PDGFRB,SLC6A7	-35884,-1837
chr10:120355121-120355340	chr10	+	120355121	120355389	True	NM_004248,NM_199461	chr10,chr10	-,+	PRLHR,NANOS1	15,433838
chr15:62933091-62933535	chr15	+	62933318	62933506	True	NM_015059,NR_026897	chr15,chr15	+,-	TLN2,MGC15885	6003,3924
chr17:27620191-27620554	chr17	+	27620190	27620553	True	NM_005208,NM_020772	chr17,chr17	+,-	CRYBA1,NUFIP2	-46366,663
chr3:16647101-16648008	chr3	+	16647252	16647891	True	NM_001144382,NM_001351,NM_001190811	chr3,chr3,chr3	+,-,-	PLCL2,DAZL,DAZL	278560,-246,-955
chr1:100712462-100713705	chr1	+	100712470	100713364	True	NM_001130841,NM_001918	chr1,chr1	+,-	RTCD1,DBT	18349,2095
chr6:2765275-2765604	chr6	+	2765278	2765602	True	NM_001012418,NM_020135,NM_130395	chr6,chr6,chr6	-,+,+	MYLK4,WRNIP1,WRNIP1	-14124,63,63
chr6:26656563-26656857	chr6	+	26656640	26656891	True	NM_013375,NM_024639	chr6,chr6	+,-	ABT1,ZNF322A	-59524,3133
chr19:4118499-4120058	chr19	+	4118811	4119915	True	NM_030662,NM_032607	chr19,chr19	-,+	MAP2K2,CREB3L3	4261,33713
chr10:112403195-112403436	chr10	+	112403245	112403376	True	NR_026932,NM_001134363	chr10,chr10	-,+	LOC282997,RBM20	227341,778
chr4:141266375-141267560	chr4	+	141266479	141267537	True	NM_001153446,NM_001153585,NM_001153690,NM_001153635,NR_033939	chr4,chr4,chr4,chr4,chr4	+,+,+,+,-	SCOC,SCOC,SCOC,SCOC,LOC100129858	-1936,-1918,-1918,-1936,27059
chr19:47337182-47337587	chr19	+	47337508	47337603	True	NR_024258,NM_004491	chr19,chr19	-,+	SNAR-E,GRLF1	-3547,84329
chr1:156698899-156699581	chr1	+	156698945	156699626	True	NM_001142560,NM_015997,NM_030980	chr1,chr1,chr1	+,+,-	RRNAD1,RRNAD1,ISG20L2	-733,-733,-1240
chr7:143319939-143320152	chr7	+	143319986	143320200	True	NM_178561,NM_001130025,NM_173678	chr7,chr7,chr7	-,+,+	CTAGE6P,FAM115C,FAM115C	134693,-2000,-1503
chr7:143319939-143320152	chr7	-	143531630	143531844	False	NR_015421,NM_001004685	chr7,chr7	-,+	LOC154761,OR2F2	2024,100481
chr7:143319939-143320152	chr7	+	143399205	143399419	False	NM_178561,NM_001130026	chr7,chr7	-,+	CTAGE6P,FAM115C	55474,13519
chr6:11035024-11036776	chr6	+	11035295	11036774	True	NM_017770,NM_001135575	chr6,chr6	-,+	ELOVL2,LOC221710	7900,57491
chr11:34370543-34371759	chr11	+	34370606	34371674	True	NM_001752,NM_145804	chr11,chr11	+,-	CAT,ABTB2	88797,7931
chr10:75933144-75933989	chr10	+	75933518	75933784	True	NM_001123,NM_001202449,NM_207012	chr10,chr10,chr10	+,+,-	ADK,ADK,AP3M1	2462,2462,-22692
chr3:15560628-15562164	chr3	+	15560646	15561932	True	NM_005677,NM_000060,NM_080539	chr3,chr3,chr3	-,+,-	COLQ,BTD,COLQ	1376,81322,1376
chr1:24528961-24530107	chr1	+	24529009	24530035	True	NM_173065,NR_027087	chr1,chr1	-,+	IL28RA,LOC284632	-15244,-2330
chrX:129297139-129297849	chrX	+	129297315	129297796	True	NM_001130847,NM_004794,NM_004208,NM_145812,NM_145813	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	AIFM1,RAB33A,AIFM1,AIFM1,AIFM1	2124,7976,2124,2124,2124
chrX:13337274-13337835	chrX	+	13337273	13337852	True	NM_001167890,NM_001135995	chrX,chrX	+,-	EGFL6,ATXN3L	249841,724
chr10:102278860-102279234	chr10	+	102278877	102279113	True	NM_017902,NM_015490	chr10,chr10	+,-	HIF1AN,SEC31B	16527,532
chr5:891884-892268	chr5	+	891891	892269	True	NR_027633,NM_001009877,NM_004237,NM_001166260,NM_023924	chr5,chr5,chr5,chr5,chr5	-,-,+,+,-	BRD9,BRD9,TRIP13,TRIP13,BRD9	720,455,699,699,720
chr12:110336782-110337164	chr12	+	110336919	110337173	True	NM_032300,NM_016433,NM_001143852	chr12,chr12,chr12	+,-,+	TCHP,GLTP,TCHP	1149,-18626,905
chr2:96993655-96993911	chr2	+	96993699	96993943	True	NM_015341,NM_001163523,NM_001163524,NM_178495,NM_001008949,NM_014014	chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,+,-	NCAPH,ITPRIPL1,ITPRIPL1,ITPRIPL1,ITPRIPL1,SNRNP200	7540,-2681,-1805,-1815,-2688,-22392
chr11:64854893-64855402	chr11	+	64854945	64855257	True	NM_013265,NM_006782,NM_080668	chr11,chr11,chr11	+,+,-	C11orf2,ZFPL1,CDCA5	8425,-3302,-3330
chr8:41435624-41435841	chr8	+	41435668	41435814	True	NM_152568,NM_178819	chr8,chr8	-,+	NKX6-3,AGPAT6	69114,-12
chr14:37051352-37051647	chr14	+	37051414	37051594	True	NM_006194,NM_014360	chr14,chr14	+,-	PAX9,NKX2-8	75178,242
chr17:28252-29675	chr17	+	28419	28979	True	NM_001013672,NM_003585	chr17,chr17	+,-	C17orf97,DOC2B	231138,2491
chr7:38919404-38921280	chr7	+	38919593	38921318	True	NM_014396,NM_001166018	chr7,chr7	-,+	VPS41,POU6F2	27532,96290
chr1:51783863-51784466	chr1	+	51784119	51784481	True	NM_001080494,NM_014372	chr1,chr1	-,+	TTC39A,RNF11	3507,-82225
chr10:49611423-49611882	chr10	+	49611618	49611696	True	NM_139046,NM_139047,NM_002750,NM_001018071,NM_139049	chr10,chr10,chr10,chr10,chr10	+,+,+,-,+	MAPK8,MAPK8,MAPK8,FRMPD2,MAPK8	-1990,-1990,-1990,-128677,-1990
chr7:140804504-140805749	chr7	+	140804620	140805568	True	NM_053035,NM_001195278	chr7,chr7	-,+	MRPS33,LOC100131199	-89839,-30644
chr17:46032454-46032825	chr17	+	46032589	46032777	True	NM_018129,NM_024320	chr17,chr17	+,-	PNPO,PRR15L	-13752,2383
chr7:29522730-29523392	chr7	+	29522747	29523361	True	NM_001039936,NR_024278	chr7,chr7	+,-	CHN2,LOC646762	-3314,201443
chr4:140003247-140003938	chr4	+	140003345	140003959	True	NM_006874,NM_012118	chr4,chr4	-,+	ELF2,CCRN4L	1738,-66453
chr17:8116117-8117292	chr17	+	8116868	8117142	True	NM_004217,NR_037447	chr17,chr17	-,+	AURKB,MIR3676	-2985,-26426
chr4:49291084-49292444	chr4	+	49291417	49292319	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-303203,-382602
chr4:49291084-49292444	chr4	+	49285404	49286079	False	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-297190,-376589
chr4:49291084-49292444	chr4	-	49328217	49328892	False	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-340006,-419402
chr3:140771458-140771748	chr3	+	140771520	140771694	True	NM_001178140,NM_080862	chr3,chr3	-,+	TFDP2,SPSB4	947585,-828
chr18:43679786-43680072	chr18	+	43679791	43679901	True	NR_026978,NM_138443,NM_004046,NM_001001937	chr18,chr18,chr18,chr18	+,+,-,-	HAUS1,HAUS1,ATP5A1,ATP5A1	4396,4396,-1504,4356
chr17:7018064-7018441	chr17	+	7018099	7018457	True	NM_080913,NM_080912,NM_001181,NM_080914,NM_001201352,NM_201566	chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,+	ASGR2,ASGR2,ASGR2,ASGR2,ASGR2,SLC16A13	31,31,31,-470,31,-78756
chr19:11883101-11883899	chr19	+	11883269	11883949	True	NM_152355,NM_001080493	chr19,chr19	+,-	ZNF441,ZNF823	-5512,-33509
chr19:11883101-11883899	chr19	-	11885819	11885876	False	NM_152355,NM_001080493	chr19,chr19	+,-	ZNF441,ZNF823	-8062,-36059
chr20:30324533-30325394	chr20	+	30325071	30325245	True	NM_012112,NM_138578	chr20,chr20	+,-	TPX2,BCL2L1	1658,-14415
chr17:44897337-44897575	chr17_ctg5_hap1	+	1664542	1664784	False	NR_033799,NM_016632	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	NSFP1,ARL17A	-139680,-150658
chr17:44897337-44897575	chr17	+	44897345	44897587	True	NM_003396,NM_030753	chr17,chr17	+,-	WNT9B,WNT3	31380,-1263
chr5:178331995-178333647	chr5	+	178332028	178333452	True	NM_000843,NM_030613	chr5,chr5	-,+	GRM6,ZFP2	88735,-9165
chr1:39455726-39456074	chr1	+	39455856	39456088	True	NM_024595,NM_001136275,NM_017821	chr1,chr1,chr1	+,+,-	AKIRIN1,AKIRIN1,RHBDL2	827,827,-48400
chr7:127291404-127291822	chr7	+	127291420	127291784	True	NM_006193,NM_014390	chr7,chr7	-,+	PAX4,SND1	-35640,417
chr16:56966008-56966300	chr16	+	56966055	56966257	True	NM_001010990,NM_001010989,NM_014685,NM_024946	chr16,chr16,chr16,chr16	+,+,+,-	HERPUD1,HERPUD1,HERPUD1,FAM192A	-358,-358,-358,253769
chr9:125563108-125563468	chr9	+	125563144	125563502	True	NM_080859,NM_005388	chr9,chr9	+,-	OR1K1,PDCL	-793,27483
chr10:105005712-105006185	chr10	+	105005844	105006188	True	NM_012229,NM_001143909	chr10,chr10	-,+	NT5C2,LOC729020	-52788,-252
chr11:59387766-59388632	chr11	+	59387765	59388477	True	NM_001004711,NM_002556	chr11,chr11	+,-	OR4D9,OSBP	-105430,-4148
chr15:44117916-44118647	chr15	+	44117934	44118694	True	NM_005926,NM_001167941,NM_024908	chr15,chr15,chr15	-,+,+	MFAP1,WDR76,WDR76	-983,417,417
chr20:37061912-37063312	chr20	+	37061950	37063054	True	NR_015366,NR_002910,NR_002911,NR_003239,NR_003017,NR_027241,NR_003018	chr20,chr20,chr20,chr20,chr20,chr20,chr20	-,-,-,+,-,-,-	LOC388796,SNORA71B,SNORA71A,SNHG11,SNORA71C,LOC388796,SNORA71D	958,-7972,-5864,12242,-3503,1014,80
chr17:25959198-25960269	chr17	+	25959416	25960239	True	NM_000625,NM_009587,NM_002308,NR_024043	chr17,chr17,chr17,chr17	-,+,+,+	NOS2,LGALS9,LGALS9,LGALS9	167367,-1293,-1293,-1293
chr10:30026064-30027081	chr10	+	30026129	30027080	True	NM_003174,NR_003930	chr10,chr10	-,+	SVIL,LOC387647	-1399,-327679
chr8:59575901-59577162	chr8	+	59576107	59577053	True	NM_005625,NM_003580,NM_001144772	chr8,chr8,chr8	+,-,-	SDCBP,NSMAF,NSMAF	-110432,-3703,-4141
chr21:33031521-33031746	chr21	+	33031612	33031748	True	NM_000454,NM_001145444	chr21,chr21	+,-	SOD1,SCAF4	186,72733
chr19:55884019-55884245	chr19	+	55884023	55884259	True	NM_000641,NM_001145402,NM_139172	chr19,chr19,chr19	-,-,+	IL11,FAM71E2,TMEM190	-2209,-9403,3944
chr6:52942193-52943660	chr6	+	52942581	52943697	True	NM_012347,NM_016513	chr6,chr6	+,-	FBXO9,ICK	-6868,-15981
chr1:242011550-242011902	chr1	+	242011704	242011946	True	NM_006027,NM_001004343,NM_130398,NM_003686	chr1,chr1,chr1,chr1	+,-,+,+	EXO1,MAP1LC3C,EXO1,EXO1	86,150489,-262,86
chr20:32821246-32822462	chr20	+	32821424	32822234	True	NM_001672,NM_000687	chr20,chr20	+,-	ASIP,AHCY	25936,69031
chr7:99956640-99957007	chr7	+	99956746	99957050	True	NM_178238,NR_003613	chr7,chr7	+,-	PILRB,PMS2P1	-1171,-22816
chr3:138312642-138312979	chr3	+	138312660	138312924	True	NM_001033030,NM_024491	chr3,chr3	+,-	FAIM,CEP70	14617,255
chr2:84770205-84771521	chr2	+	84770323	84771562	True	NM_003849,NM_001370	chr2,chr2	-,+	SUCLG1,DNAH6	-83737,-26796
chr6:27842136-27842835	chr6	+	27842428	27842709	True	NM_003546,NM_003511,NM_003533,NM_005322	chr6,chr6,chr6,chr6	-,+,-,-	HIST1H4L,HIST1H2AL,HIST1H3I,HIST1H1B	-1139,-9373,-2329,-7069
chr17:74100330-74100572	chr17	+	74100417	74100617	True	NM_001013839,NM_015219,NM_001145297,NM_180990,NM_001145299,NM_001145298,NR_028133	chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,+,-,-,-	EXOC7,EXOC7,EXOC7,ZACN,EXOC7,EXOC7,EXOC7	-549,-549,-549,-25205,-549,-549,-765
chr6:168594836-168595173	chr6	+	168594838	168595106	True	NM_030615,NM_024919	chr6,chr6	+,-	KIF25,FRMD1	-176336,-114999
chr7:48046772-48047151	chr7	+	48046788	48047036	True	NM_001030019,NM_001100159	chr7,chr7	-,+	SUN3,C7orf57	21730,28080
chr12:96589974-96590709	chr12	+	96590027	96590704	True	NM_000895,NM_005230	chr12,chr12	-,+	LTA4H,ELK3	-160662,-1871
chr22:32845880-32847516	chr22	+	32846015	32847136	True	NM_174932,NM_012179	chr22,chr22	-,+	BPIL2,FBXO7	6287,23570
chr3:49726124-49726556	chr3	+	49726241	49726309	True	NM_022064,NM_020998	chr3,chr3	+,-	RNF123,MST1	680,-45
chr12:56354911-56355913	chr12	+	56355076	56355623	True	NM_001200053,NM_006928,NM_001798,NM_001200054,NM_052827	chr12,chr12,chr12,chr12,chr12	-,-,+,-,+	PMEL,PMEL,CDK2,PMEL,CDK2	4286,4936,4932,4286,4932
chr7:92832105-92833163	chr7	+	92832136	92833174	True	NM_024553,NM_198151	chr7,chr7	+,-	CCDC132,HEPACAM2	28478,15746
chr9:132961045-132961320	chr9	+	132961098	132961366	True	NM_001128826,NM_015033	chr9,chr9	+,-	NCS1,FNBP1	1505,-155625
chr7:37902576-37903978	chr7	+	37902830	37903828	True	NM_003014,NM_016616	chr7,chr7	-,+	SFRP4,TXNDC3	52749,-14688
chr6:150390759-150391892	chr6	+	150390874	150391917	True	NM_030949,NM_024518	chr6,chr6	+,-	PPP1R14C,ULBP3	72270,-672
chr7:5568246-5568736	chr7	+	5568271	5568685	True	NM_001101,NM_003088	chr7,chr7	-,+	ACTB,FSCN1	1597,63768
chr10:126137230-126137464	chr10	+	126137229	126137379	True	NM_001146340,NM_001167880	chr10,chr10	-,+	NKX1-2,LHPP	1221,12961
chr3:184524487-184525250	chr3	+	184524523	184525000	True	NM_001009921,NM_022149,NM_015303	chr3,chr3,chr3	+,-,+	VPS8,MAGEF1,VPS8	4930,-94687,4930
chrX:2748682-2749057	chrX	+	2748968	2749028	True	NM_001184703,NM_001184702,NM_001184704,NM_003918,NM_001079855,NM_001669	chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,-	GYG2,GYG2,GYG2,GYG2,GYG2,ARSD	-2156,-2156,-2156,-2156,-2156,98414
chr6:4712087-4712706	chr6	+	4712346	4712732	True	NR_026590,NM_006638	chr6,chr6	+,-	CDYL,RPP40	-6009,291589
chr1:19227029-19227367	chr1	+	19227242	19227414	True	NM_170726,NM_001161504,NM_003748,NM_001135254	chr1,chr1,chr1,chr1	-,-,-,+	ALDH4A1,ALDH4A1,ALDH4A1,PAX7	1929,-9857,1929,-269804
chr10:90536266-90536630	chr10	+	90536325	90536663	True	NM_001102469,NM_144590	chr10,chr10	+,-	LIPN,ANKRD22	-15227,75119
chr14:64971031-64971413	chr14	+	64971088	64971430	True	NM_006977,NM_001123329,NM_014950	chr14,chr14,chr14	-,+,+	ZBTB25,ZBTB1,ZBTB1	-534,-15,-15
chr15:62946876-62947751	chr15	+	62947098	62947727	True	NM_015059,NR_026897	chr15,chr15	+,-	TLN2,MGC15885	-7639,-9718
chr17:48548075-48548647	chr17	+	48548129	48548607	True	NM_018346,NM_001267	chr17,chr17	+,-	RSAD1,CHAD	7582,-1902
chr4:8269849-8271054	chr4	+	8269955	8271091	True	NM_053044,NM_001130088	chr4,chr4	+,-	HTRA3,ABLIM2	397,-109396
chr18:72056036-72056632	chr18	+	72056053	72056662	True	NM_001044369,NM_001174123	chr18,chr18	-,+	FAM69C,DKFZP781G0119	67891,-72994
chr17:76919204-76919885	chr17	+	76919220	76919853	True	NM_003255,NM_030968	chr17,chr17	-,+	TIMP2,C1QTNF1	1669,100397
chr3:153838124-153838618	chr3	+	153838318	153838642	True	NR_037901,NM_015595	chr3,chr3	-,+	LOC100507524,ARHGEF26	407,506
chr2:29296595-29297837	chr2	+	29296753	29297749	True	NM_001029883,NM_024692	chr2,chr2	-,+	C2orf71,CLIP4	-62,40558
chr18:56940864-56941244	chr18	+	56940966	56941286	True	NM_013435,NM_002091	chr18,chr18	-,+	RAX,GRP	-341,-53617
chr16:70835015-70835855	chr16	+	70835019	70835891	True	NR_034083,NM_018052	chr16,chr16	+,-	LOC100130894,VAC14	-46107,42
chr1:1858947-1859320	chr1	+	1859090	1859158	True	NM_138705,NM_178545	chr1,chr1	+,-	CALML6,TMEM52	-12875,-8350
chr5:55031869-55032454	chr5	+	55032129	55032342	True	NM_173514,NM_001142549,NM_001166533,NM_024415	chr5,chr5,chr5,chr5	-,+,+,+	SLC38A9,DDX4,DDX4,DDX4	-23966,1502,1502,1502
chr3:13977483-13978091	chr3	+	13977504	13977964	True	NR_036481,NM_004625,NR_002223	chr3,chr3,chr3	+,-,+	LOC100132526,WNT7A,TPRXL	-3002,-55886,842
chr11:134284804-134285760	chr11	+	134284810	134285695	True	NM_018644,NR_033852	chr11,chr11	-,+	B3GAT1,LOC283177	-2998,20680
chr19:51219623-51219935	chr19	+	51219628	51219984	True	NM_016148,NM_002975	chr19,chr19	-,+	SHANK1,CLEC11A	261,6620
chr19:59074671-59074918	chr19	+	59074723	59074939	True	NM_198426,NR_027334,NM_003969,NM_014453	chr19,chr19,chr19,chr19	-,+,-,-	CHMP2A,LOC100131691,UBE2M,CHMP2A	-8368,-4221,-4380,-8237
chr1:78478347-78478780	chr1	+	78478559	78478825	True	NM_007034,NM_003902	chr1,chr1	+,-	DNAJB4,FUBP1	-7985,-33782
chr9:95569635-95569938	chr9	+	95569785	95569897	True	NM_015250,NR_026868	chr9,chr9	-,+	BICD2,ANKRD19	-42702,1995
chr1:37939600-37939875	chr1	+	37939664	37939924	True	NM_022756,NM_025079	chr1,chr1	-,+	MEAF6,ZC3H12A	40490,194
chr2:158992245-158992554	chr2	+	158992311	158992527	True	NM_001111067,NM_173355	chr2,chr2	-,+	ACVR1,UPP2	-259937,-33982
chr10:104405795-104406517	chr10	+	104405822	104406378	True	NM_030912,NM_004311	chr10,chr10	+,-	TRIM8,ARL3	-1621,67862
chr17:28884926-28885579	chr17	+	28884942	28885624	True	NM_206832,NM_015594	chr17,chr17	-,+	TMIGD1,TBC1D29	-223877,959
chr13:33591523-33591895	chr13	+	33591531	33591921	True	NM_004795,NM_178007	chr13,chr13	+,-	KL,STARD13	-1011,168351
chr22:42950926-42951640	chr22	+	42951233	42951537	True	NR_002184,NM_014509	chr22,chr22	-,+	RRP7B,SERHL2	26530,-1359
chr22:42950926-42951640	chr22	+	42897920	42898224	False	NR_027786,NM_015703	chr22,chr22	+,-	SERHL,RRP7A	-1386,17655
chr5:112322498-112323899	chr5	+	112323059	112323906	True	NM_005669,NM_152624	chr5,chr5	-,+	REEP5,DCP2	-65028,-10690
chr6:96463499-96463874	chr6	+	96463501	96463898	True	NM_001143957,NM_006581	chr6,chr6	-,+	GPR63,FUT9	821505,-44
chr2:79740070-79740340	chr2	+	79740225	79740359	True	NM_001164883,NM_004389,NR_036231	chr2,chr2,chr2	+,+,-	CTNNA2,CTNNA2,MIR4264	-216,-216,136176
chr16:23197599-23197858	chr16	+	23197626	23197894	True	NM_001039,NM_020718	chr16,chr16	+,-	SCNN1G,USP31	-3637,-37035
chr5:140706475-140708255	chr5	+	140706542	140708286	True	NM_005642,NM_018912,NM_031993	chr5,chr5,chr5	-,+,+	TAF7,PCDHGA1,PCDHGA1	-6191,1965,1965
chr1:16691947-16692477	chr1	+	16692108	16692299	True	NM_018994,NM_015609,NM_001114600	chr1,chr1,chr1	-,+,+	FBXO42,C1orf144,C1orf144	-13160,1283,1283
chr4:113182980-113183325	chr4	+	113183026	113183096	True	NM_018569,NM_052864	chr4,chr4	+,-	AP1AR,TIFA	-30182,24013
chr21:45528686-45528890	chr21	+	45528697	45528935	True	NM_005049,NM_015259	chr21,chr21	+,-	PWP2,ICOSLG	-1540,131949
chr15:35591450-35591659	chr15	+	35591494	35591664	True	NR_003144,NR_037507	chr15,chr15	+,-	LOC723972,MIR3942	-62018,72951
chr22:50921837-50922276	chr22	+	50921904	50922310	True	NM_024866,NM_017584,NM_002972	chr22,chr22,chr22	+,+,-	ADM2,MIOX,SBF1	-1943,2902,-8440
chr15:55799904-55800627	chr15	+	55800157	55800533	True	NM_130810,NM_001033559,NR_037923,NM_001198784,NM_001033560	chr15,chr15,chr15,chr15,chr15	-,-,-,+,-	DYX1C1,DYX1C1,DYX1C1-CCPG1,FLJ27352,DYX1C1	16,16,-9375,-99486,16
chr11:2291798-2291998	chr11	+	2291800	2291936	True	NM_139022,NM_005170	chr11,chr11	+,-	TSPAN32,ASCL2	31306,296
chr1:57231846-57232403	chr1	+	57231876	57232451	True	NM_000562,NM_001004303	chr1,chr1	+,-	C8A,C1orf168	87991,52968
chr6:137114708-137114972	chr6	+	137114803	137114913	True	NM_000288,NM_005923	chr6,chr6	+,-	PEX7,MAP3K5	28788,-1147
chr12:32653526-32655083	chr12	+	32653812	32655029	True	NM_001040436,NM_139241	chr12,chr12	-,+	YARS2,FGD4	253908,11
chr6:109167554-109169442	chr6	+	109167575	109169400	True	NM_001199934,NM_032131	chr6,chr6	-,+	SESN1,ARMC2	160841,218
chr7:5226994-5227889	chr7	+	5227085	5227690	True	NM_016003,NM_015610,NR_034163,NM_001033519,NM_001033518	chr7,chr7,chr7,chr7,chr7	+,+,-,+,+	WIPI2,WIPI2,ZNF890P,WIPI2,WIPI2	2144,2144,-42908,2144,2144
chr19:39466573-39466881	chr19	+	39466731	39466879	True	NM_024907,NM_033363	chr19,chr19	-,+	FBXO17,MRPS12	-351,-45188
chr22:16288143-16288472	chr22	+	16288211	16288515	True	NR_001591,NM_001136213	chr22,chr22	+,-	psiTPTE22,POTEH	794285,-274
chr19:52133695-52134225	chr19	+	52133933	52134023	True	NM_007147,NM_003830	chr19,chr19	+,-	ZNF175,SIGLEC5	-59453,-206
chr7:27141934-27142518	chr7	+	27141968	27142377	True	NM_005522,NM_153620,NM_006735,NR_002795	chr7,chr7,chr7,chr7	-,-,-,+	HOXA1,HOXA1,HOXA2,HOXA11-AS1	-6343,-6343,70,82649
chr4:110387859-110388202	chr4	+	110387914	110388211	True	NM_032518,NM_006323	chr4,chr4	-,+	COL25A1,SEC24B	-164115,-33003
chr1:27020748-27021642	chr1	+	27020753	27021564	True	NM_018066,NM_139135,NM_006015	chr1,chr1,chr1	-,+,+	GPN2,ARID1A,ARID1A	195358,957,957
chr3:126073231-126073829	chr3	+	126073231	126073809	True	NM_182628,NM_014079	chr3,chr3	+,-	CCDC37,KLF15	39972,2477
chr20:44878372-44879760	chr20	+	44878388	44879634	True	NM_152854,NM_021248	chr20,chr20	+,-	CD40,CDH22	-131533,750
chr1:45478820-45480505	chr1	+	45479081	45480208	True	NM_000374,NM_024602,NR_036510	chr1,chr1,chr1	+,-,+	UROD,HECTD3,UROD	-1334,-2054,-1334
chr6:150038974-150039246	chr6	+	150039018	150039278	True	NM_004690,NM_005389	chr6,chr6	-,+	LATS1,PCMT1	164,31552
chr2:87143718-87144094	chr2	+	87143920	87144103	True	NM_001078170,NM_004931,NM_001024457	chr2,chr2,chr2	+,-,+	RGPD2,CD8B,RGPD1	-3038,-54873,634
chr2:87143718-87144094	chr2	-	112601818	112601870	False	NM_022662,NM_006343	chr2,chr2	-,+	ANAPC1,MERTK	39923,54320
chr2:87143718-87144094	chr2	-	88286071	88286123	False	NM_198274,NM_001024457	chr2,chr2	+,-	SMYD1,RGPD1	81175,-762
chr2:87143718-87144094	chr2	+	87134258	87134441	False	NM_001078170,NM_004931	chr2,chr2	+,-	RGPD2,CD8B	6493,-45211
chr17:18967330-18967654	chr17	+	18967421	18967489	True	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	63292,-17085
chr17:18967330-18967654	chr17	-	18965184	18965252	False	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	65529,-14848
chr11:1642135-1643201	chr11	+	1642275	1642617	True	NM_001012709,NM_001001480	chr11,chr11	-,+	KRTAP5-4,KRTAP5-5	801,8415
chr10:124625509-124627085	chr10	+	124625993	124626748	True	NR_027282,NR_037915	chr10,chr10	+,-	LOC399815,FAM24B-CUZD1	12400,12460
chr22:20306151-20307108	chr22	+	20306192	20307078	True	NR_026919,NM_033257	chr22,chr22	+,-	LOC150197,DGCR6L	-112388,600
chr15:82337029-82337372	chr15	+	82337035	82337419	True	NM_032246,NM_001008226	chr15,chr15	-,+	MEX3B,FAM154B	992,217732
chr15:67003553-67004181	chr15	+	67003574	67004068	True	NM_005585,NM_001142861,NM_207338,NR_027654	chr15,chr15,chr15,chr15	+,+,-,+	SMAD6,SMAD6,LCTL,SMAD6	-8951,-2695,-145739,-8951
chr3:137903101-137903577	chr3	+	137903265	137903545	True	NM_014154,NM_015396,NM_213654,NM_016216	chr3,chr3,chr3,chr3	+,+,+,-	ARMC8,ARMC8,ARMC8,DBR1	2602,2602,2602,-9474
chr12:128050352-128051438	chr12	+	128050514	128050650	True	NR_033970,NR_033987	chr12,chr12	-,+	LOC440117,FLJ37505	-691278,315511
chr12:31405441-31407355	chr12	+	31405836	31407338	True	NR_026806,NM_001135811	chr12,chr12	+,-	FLJ13224,FAM60A	69911,71834
chr12:54348002-54348694	chr12	+	54348051	54348705	True	NM_173860,NR_003716	chr12,chr12	+,-	HOXC12,HOTAIR	8,13860
chr5:140214583-140215324	chr5	+	140214631	140215127	True	NM_031849,NM_002109,NM_018909,NM_031848,NM_031856,NM_018910,NM_018911,NM_031852	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,-,+,+,+,+,+,+	PCDHA6,HARS,PCDHA6,PCDHA6,PCDHA8,PCDHA7,PCDHA8,PCDHA7	-7032,-143660,-7032,-7032,5779,-713,5779,-713
chr5:140214583-140215324	chr5	+	140228743	140228793	False	NM_014005,NM_031860,NM_002109,NM_018911,NM_031859,NM_031856,NM_031857,NM_018901	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,-,+,+,+,+,+	PCDHA9,PCDHA10,HARS,PCDHA8,PCDHA10,PCDHA8,PCDHA9,PCDHA10	-1437,6840,-157772,-7887,6840,-7887,-1437,6840
chr9:79009685-79010681	chr9	+	79009725	79010646	True	NM_018339,NR_026890	chr9,chr9	-,+	RFK,RPSAP9	-281,2868
chr11:93419339-93421193	chr11	+	93419564	93421002	True	NM_033395,NR_003028	chr11,chr11	+,-	KIAA1731,SNORA25	-24799,42861
chr19:17487461-17487728	chr19	+	17487713	17487775	True	NM_031310,NM_133644	chr19,chr19	-,+	PLVAP,GTPBP3	412,-39438
chr5:73980593-73980805	chr5	+	73980781	73980853	True	NM_003633,NM_000521	chr5,chr5	-,+	ENC1,HEXB	-43532,115
chr11:15093298-15093527	chr11	+	15093301	15093565	True	NM_001741,NM_000728	chr11,chr11	-,+	CALCA,CALCB	-99469,1580
chr17:78194689-78195289	chr17	+	78194812	78195327	True	NM_000199,NM_173626,NM_001166349,NM_001166348,NM_001166347	chr17,chr17,chr17,chr17,chr17	-,+,+,+,+	SGSH,SLC26A11,SLC26A11,SLC26A11,SLC26A11	-613,-663,-663,-663,-663
chr16:30379226-30379896	chr16	+	30379377	30379751	True	NM_013292,NM_015527	chr16,chr16	+,-	MYLPF,TBC1D10B	6371,1821
chr5:177020661-177021299	chr5	+	177020711	177021247	True	NR_024019,NM_017510,NM_007255	chr5,chr5,chr5	-,+,+	FAM193B,TMED9,B4GALT7	-39163,-1549,5871
chr12:122324897-122325435	chr12	+	122325266	122325332	True	NM_001171993,NM_002813	chr12,chr12	-,+	HPD,PSMD9	1241,1313
chr7:72846830-72847205	chr7	+	72847018	72847198	True	NM_003508,NM_032408	chr7,chr7	+,-	FZD9,BAZ1B	910,89467
chr2:95831599-95831830	chr2	+	95831721	95831865	True	NM_021088,NM_001017396,NM_032788	chr2,chr2,chr2	+,+,-	ZNF2,ZNF2,ZNF514	-589,-589,-6458
chr14:25079914-25080285	chr14	+	25080079	25080325	True	NM_033423,NM_015299	chr14,chr14	-,+	GZMH,KHNYN	-1215,-180993
chr17:19436046-19436441	chr17	+	19436240	19436418	True	NM_002404,NM_018242	chr17,chr17	-,+	MFAP4,SLC47A1	-145708,748
chr12:56849043-56849574	chr12	+	56849100	56849595	True	NM_003920,NM_012064,NM_207344	chr12,chr12,chr12	-,-,+	TIMELESS,MIP,SPRYD4	-5900,-665,12705
chrX:106158754-106159762	chrX	+	106158799	106159784	True	NM_001171095,NM_138382,NM_020384	chrX,chrX,chrX	+,-,+	CLDN2,RIPPLY1,CLDN2	1805,-12238,3821
chr7:126985893-126986951	chr7	+	126985960	126986986	True	NM_001662,NM_176814	chr7,chr7	+,-	ARF5,ZNF800	241419,45831
chr16:30795772-30796966	chr16	+	30795844	30796765	True	NM_001080417,NM_014771	chr16,chr16	-,+	ZNF629,RNF40	1808,-22265
chr8:7751150-7751678	chr8	+	7751185	7751475	True	NM_004942,NM_152250	chr8,chr8	+,-	DEFB4A,DEFB105A	723,-69825
chr8:7751150-7751678	chr8	-	7275109	7275319	False	NM_001040703,NM_001205266	chr8,chr8	+,-	DEFB105B,DEFB4B	69923,-755
chr3:50193179-50194179	chr3	+	50193241	50193997	True	NM_004186,NM_006764	chr3,chr3	+,-	SEMA3F,IFRD2	-444,136079
chr20:13618960-13619284	chr20	+	13618960	13619220	True	NM_001039375,NM_017714	chr20,chr20	+,-	C20orf7,TASP1	146451,413
chr17:44895018-44895265	chr17_ctg5_hap1	+	1662239	1662512	False	NR_033799,NM_016632	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	NSFP1,ARL17A	-137378,-148355
chr17:44895018-44895265	chr17	+	44895042	44895315	True	NM_003396,NM_030753	chr17,chr17	+,-	WNT9B,WNT3	33652,818
chr18:43912480-43913773	chr18	+	43912568	43913710	True	NM_001173129,NM_152470	chr18,chr18	-,+	LOXHD1,RNF165	185389,476
chr4:6381845-6382135	chr4	+	6381975	6382075	True	NM_006005,NM_181876	chr4,chr4	+,-	WFS1,PPP2R2C	-110456,1572
chr6:36646808-36647047	chr6	+	36646886	36647074	True	NR_037491,NM_078467,NM_000389,NR_037152,NR_037150,NR_037151	chr6,chr6,chr6,chr6,chr6,chr6	-,+,+,+,+,+	MIR3925,CDKN1A,CDKN1A,CDKN1A,CDKN1A,CDKN1A	-56597,-2670,-481,-2700,-2623,-450
chr6:4853546-4855199	chr6	+	4853639	4855213	True	NM_001143970,NM_006638	chr6,chr6	+,-	CDYL,RPP40	-17358,149108
chrX:49215047-49216373	chrX	+	49215267	49215347	True	NM_014009,NM_001098407,NM_001098405,NM_012196,NM_021123,NM_001127200,NM_001475,NM_001474,NM_001477,NM_001127212,NM_001472	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,+,+,+,+,+,+	FOXP3,GAGE2D,GAGE12F,GAGE8,GAGE7,GAGE2E,GAGE5,GAGE4,GAGE12I,GAGE2A,GAGE2C	-93979,-8211,2423,1311,1330,1311,1309,1301,1329,1286,1300
chr13:101184925-101186114	chr13	+	101184977	101186077	True	NM_001178004,NM_033110	chr13,chr13	+,-	PCCA,A2LD1	-443759,39
chr5:110285195-110285851	chr5	+	110285210	110285882	True	NM_033035,NM_001039763	chr5,chr5	+,-	TSLP,TMEM232	121507,-222760
chr17:34811678-34813449	chr17	+	34812402	34812694	True	NM_001001418,NM_004773,NM_001040282	chr17,chr17,chr17	-,+,-	TBC1D3C,ZNHIT3,TBC1D3G	-4311,29778,-4299
chr5:176785570-176786237	chr5	+	176785584	176786226	True	NM_006816,NM_006480	chr5,chr5	-,+	LMAN2,RGS14	-6699,-791
chrX:23912981-23914106	chrX	+	23913806	23914113	True	NM_024122,NM_001169574	chrX,chrX	-,+	APOO,CXorf58	11994,12009
chr7:74489640-74489854	chr7	+	74489642	74489810	True	NM_030798,NM_001003795	chr7,chr7	-,+	WBSCR16,GTF2IRD2B	-47,18536
chr10:75410924-75411797	chr10	+	75410999	75411550	True	NM_021245,NM_024875,NM_001114133,NM_004922	chr10,chr10,chr10,chr10	-,-,-,+	MYOZ1,SYNPO2L,SYNPO2L,SEC24C	-9484,-212,4341,92580
chr17:36760999-36761650	chr17	+	36761083	36761448	True	NM_025248,NM_005937	chr17,chr17	-,+	SRCIN1,MLLT6	785,100424
chr5:24611393-24612107	chr5	+	24611767	24612119	True	NM_020227,NM_006727	chr5,chr5	+,-	PRDM9,CDH10	-1104094,33016
chr15:48938486-48938764	chr15	+	48938549	48938711	True	NM_014335,NM_000138	chr15,chr15	+,-	EID1,FBN1	231578,-564
chr6:96969550-96969917	chr6	+	96969709	96969945	True	NM_001143957,NM_015323	chr6,chr6	-,+	GPR63,KIAA0776	315458,-58
chr5:87563817-87564217	chr5	+	87563888	87564192	True	NM_153354,NM_022650	chr5,chr5	-,+	TMEM161B,RASA1	523,-999174
chr19:22235623-22235892	chr19	+	22235634	22235912	True	NM_007153,NM_033468	chr19,chr19	-,+	ZNF208,ZNF257	-41889,-419
chr5:172486426-172487286	chr5	+	172486596	172487106	True	NM_001168393,NR_026682,NM_001168394,NM_153607	chr5,chr5,chr5,chr5	+,-,+,+	C5orf41,LOC100268168,C5orf41,C5orf41	-3296,-100225,-3296,-3296
chr14:64189103-64189636	chr14	+	64189335	64189423	True	NM_030791,NM_015180	chr14,chr14	-,+	SGPP1,SYNE2	5383,130259
chr7:100239630-100239961	chr7	+	100239738	100240010	True	NM_003227,NM_023948	chr7,chr7	-,+	TFR2,MOSPD3	-565,-29675
chr2:99068001-99068495	chr2	+	99068017	99068460	True	NM_001008215,NM_001134225,NM_001134224,NM_001566,NM_004027	chr2,chr2,chr2,chr2,chr2	-,+,+,+,+	C2orf64,INPP4A,INPP4A,INPP4A,INPP4A	156546,-6747,-6747,-6747,-6747
chr14:23398592-23399931	chr14	+	23398774	23399804	True	NM_006109,NM_173527,NM_001039619	chr14,chr14,chr14	-,+,-	PRMT5,REM2,PRMT5	-113,-46393,-113
chr9:140124002-140124290	chr9	+	140124055	140124273	True	NM_001190228,NM_080877,NM_001177316,NM_001177317,NM_031297,NM_199001	chr9,chr9,chr9,chr9,chr9,chr9	+,+,+,+,-,+	LOC643596,SLC34A3,SLC34A3,SLC34A3,RNF208,C9orf169	-2088,1111,935,935,-8280,-4462
chr22:20104050-20104555	chr22	+	20104193	20104538	True	NM_182984,NM_022727,NM_002882	chr22,chr22,chr22	-,-,+	TRMT2A,TRMT2A,RANBP1	280,280,485
chr19:13002542-13003487	chr19	+	13002583	13003043	True	NM_013976,NM_000159,NM_006563	chr19,chr19,chr19	+,+,-	GCDH,GCDH,KLF1	-660,-660,-4566
chr3:47209386-47210032	chr3	+	47209496	47209718	True	NR_033373,NM_014159	chr3,chr3	+,-	FLJ39534,SETD2	-3697,-4029
chr1:14748333-14750265	chr1	+	14748377	14750090	True	NM_015209,NR_027136	chr1,chr1	+,-	KAZN,C1orf126	175122,728922
chr10:135149326-135149567	chr10	+	135149435	135149501	True	NM_001145201,NM_015722	chr10,chr10	+,-	PRAP1,CALY	11342,1024
chr3:157261497-157262003	chr3	+	157261504	157261812	True	NR_024016,NM_001130001,NM_001167916,NM_001099777,NM_001130002	chr3,chr3,chr3,chr3,chr3	+,+,-,+,+	C3orf55,C3orf55,VEPH1,C3orf55,C3orf55	-397,-397,-40089,-397,-397
chr11:126139804-126140261	chr11	+	126139909	126140301	True	NM_001177842,NR_037648,NM_003139,NM_017547,NR_037647	chr11,chr11,chr11,chr11,chr11	-,+,-,+,+	SRPR,FOXRED1,SRPR,FOXRED1,FOXRED1	-1032,-927,-1032,-1032,-1032
chr20:3775301-3775637	chr20	+	3775306	3775660	True	NM_021873,NM_021872,NM_001810,NM_004358	chr20,chr20,chr20,chr20	+,+,-,+	CDC25B,CDC25B,CENPB,CDC25B	740,740,-7969,740
chr7:143062739-143064720	chr7	+	143063231	143064411	True	NM_001010972,NM_001031690,NM_014690	chr7,chr7,chr7	+,-,-	ZYX,FAM131B,FAM131B	13948,-3391,-4058
chr11:76990743-76991838	chr11	+	76990769	76991876	True	NM_182833,NM_001127180	chr11,chr11	-,+	GDPD4,MYO7A	6638,-151510
chr2:113401496-113402058	chr2	+	113401537	113402031	True	NR_033871,NM_005415	chr2,chr2	-,+	FLJ42351,SLC20A1	4,1402
chr13:45489669-45490403	chr13	+	45489673	45490067	True	NM_012345,NM_018559	chr13,chr13	-,+	NUFIP1,KIAA1704	73596,73619
chr10:105038040-105038323	chr10	+	105038235	105038345	True	NM_032727,NM_001011663	chr10,chr10	+,-	INA,PCGF6	-1366,72596
chr3:184551970-184553588	chr3	+	184552031	184553281	True	NM_022149,NM_015303	chr3,chr3	-,+	MAGEF1,VPS8	-122195,-22158
chr10:50816751-50817293	chr10	+	50816816	50817138	True	NM_000124,NM_020984,NM_001142934,NM_001142933,NM_001142929,NM_020549,NM_003055,NM_020985,NM_020986	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,+,+,+,+,+,+,+,+	ERCC6,CHAT,CHAT,CHAT,CHAT,CHAT,SLC18A3,CHAT,CHAT	-69669,2,4944,4944,4944,4944,1208,4015,4015
chr7:105217188-105218656	chr7	+	105217659	105218713	True	NR_027068,NM_021930	chr7,chr7	-,+	EFCAB10,RINT1	3321,-45178
chr2:187697142-187699136	chr2	+	187697155	187698887	True	NM_182521,NM_177454	chr2,chr2	-,+	ZSWIM2,FAM171B	15061,-138426
chr12:45685549-45686773	chr12	+	45685702	45686756	True	NM_001142678,NR_037144	chr12,chr12	+,-	ANO6,PLEKHA8P1	48,-75913
chr12:53189773-53190952	chr12	+	53189814	53190998	True	NM_199187,NM_057088	chr12,chr12	+,-	KRT18,KRT3	151656,-44
chr19:22950653-22951554	chr19	+	22950679	22951448	True	NM_020855,NM_001080409	chr19,chr19	+,-	ZNF492,ZNF99	-133612,1398
chr1:202137564-202138040	chr1	+	202137849	202137967	True	NR_002930,NR_037663,NR_037664,NM_001199797,NM_080588,NM_002832	chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,-,-,-	PTPRVP,PTPN7,PTPN7,PTPN7,PTPN7,PTPN7	-721,-7133,-7133,-7133,-8730,-7133
chr13:41885369-41885586	chr13	+	41885484	41885582	True	NM_001110798,NM_004294,NM_018527,NM_024561	chr13,chr13,chr13,chr13	+,-,+,+	NAA16,MTRF1,NAA16,NAA16	-194,-47771,-194,-194
chr17:73042470-73042808	chr17	+	73042546	73042774	True	NM_015353,NM_006356,NM_001003785	chr17,chr17,chr17	+,-,-	KCTD2,ATP5H,ATP5H	504,350,350
chr8:70731454-70732120	chr8	+	70731480	70731799	True	NM_001128206,NM_001146009	chr8,chr8	+,-	SULF1,SLCO5A1	-326503,13656
chr14:50860998-50862240	chr14	+	50861125	50862151	True	NR_033761,NM_004196	chr14,chr14	+,-	ATP5S,CDKL1	-82134,530
chr4:52938865-52940368	chr4	+	52938868	52940388	True	NM_145263,NM_000232	chr4,chr4	+,-	SPATA18,SGCB	-21327,-34383
chr13:30877558-30878698	chr13	+	30877813	30878746	True	NM_005800,NM_032116,NM_001014380	chr13,chr13,chr13	+,-,-	USPL1,KATNAL1,KATNAL1	313083,2888,2467
chr15:34873429-34874145	chr15	+	34873521	34874176	True	NM_175741,NR_027410	chr15,chr15	+,-	C15orf55,GOLGA8B	-235506,1645
chr16:2880556-2881291	chr16	+	2880710	2881211	True	NR_026864,NM_145252	chr16,chr16	-,+	PRSS30P,ZG16B	11592,-588
chr3:13693617-13694482	chr3	+	13693711	13694371	True	NM_004625,NR_027103	chr3,chr3	-,+	WNT7A,LOC285375	227297,-1541
chr19:37151259-37152862	chr19	+	37151370	37152637	True	NM_153257,NM_152603	chr19,chr19	-,+	ZNF461,ZNF567	5152,27664
chr7:72338990-72340489	chr7	+	72339116	72340426	True	NR_003666,NM_172020	chr7,chr7	-,+	SPDYE7P,POM121	519,9509
chr18:74241510-74241795	chr18	+	74241660	74241830	True	NR_015417,NM_014643	chr18,chr18	+,-	LOC284276,ZNF516	-1099,-34514
chrX:153957630-153959065	chrX	+	153957716	153958701	True	NM_001081573,NM_001142463	chrX,chrX	-,+	GAB3,DKC1	20698,32329
chr10:100996138-100996796	chr10	+	100996154	100996838	True	NM_021828,NM_001166246,NM_020348,NM_001166244,NM_001166245	chr10,chr10,chr10,chr10,chr10	-,-,+,-,-	HPSE2,HPSE2,CNNM1,HPSE2,HPSE2	-522,-522,92017,-522,-522
chrY:6113314-6114080	chrY	+	6113378	6113970	True	NM_022573,NR_001540,NR_003593	chrY,chrY,chrY	+,-,-	TSPY2,TTTY23,TTTY23B	293,-1727,-1727
chrY:6113314-6114080	chrY	-	9746087	9746679	False	NR_001540,NR_003593,NR_003589	chrY,chrY,chrY	+,+,-	TTTY23,TTTY23B,TTTY1B	1727,1727,-134159
chr1:24881909-24882174	chr1	+	24881913	24882189	True	NM_001199012,NM_001010980	chr1,chr1	-,+	C1orf201,C1orf130	-140326,377
chr8:56367146-56367481	chr8	+	56367197	56367507	True	NR_027765,NM_024831	chr8,chr8	-,+	SBF1P1,TGS1	424,318283
chr19:3625618-3625832	chr19	+	3625741	3625881	True	NM_021231,NM_001080543,NM_133261	chr19,chr19,chr19	-,-,+	C19orf29,C19orf29,GIPC3	982,982,-40223
chr1:206680523-206680929	chr1	+	206680619	206680927	True	NM_182664,NM_001201478,NM_182663	chr1,chr1,chr1	+,-,+	RASSF5,EIF2D,RASSF5	-41,105027,-41
chr2:187475853-187476738	chr2	+	187475909	187476786	True	NM_182521,NM_001144999	chr2,chr2	-,+	ZSWIM2,ITGAV	237168,-11036
chr5:150137923-150138348	chr5	+	150137992	150138326	True	NM_032947,NM_001135644,NM_001135643,NM_016221	chr5,chr5,chr5,chr5	+,-,-,-	C5orf62,DCTN4,DCTN4,DCTN4	19181,-80,381,381
chr6:14754091-14755744	chr6	+	14754995	14755536	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	490990,907812
chr6:158402323-158402533	chr6	+	158402322	158402518	True	NM_003898,NM_032861	chr6,chr6	+,-	SYNJ2,SERAC1	369,186844
chr11:62418879-62420265	chr11	+	62419329	62420287	True	NM_001043229,NM_030628,NM_198335,NM_198334	chr11,chr11,chr11,chr11	+,-,-,-	METTL12,INTS5,GANAB,GANAB	12491,537,-5225,-5225
chr1:21878894-21880092	chr1	+	21879270	21880112	True	NM_001177520,NM_001145658	chr1,chr1	+,-	ALPL,RAP1GAP	-43470,98286
chr2:191742846-191744125	chr2	+	191742881	191744164	True	NM_014905,NM_007315	chr2,chr2	+,-	GLS,STAT1	1382,134872
chr17:37320108-37320475	chr17	+	37320447	37320523	True	NM_000981,NM_001143968	chr17,chr17	+,-	RPL19,ARL5C	36012,1941
chr12:133339081-133339637	chr12	+	133339147	133339601	True	NM_001170544,NM_015114	chr12,chr12	+,-	PGAM5,ANKLE2	-51807,-696
chr1:6843382-6844273	chr1	+	6843595	6844311	True	NM_001195563,NM_018198,NM_015215	chr1,chr1,chr1	+,-,+	CAMTA1,DNAJC11,CAMTA1	1072,-81629,1072
chr21:43922467-43922834	chr21	+	43922491	43922836	True	NM_080860,NM_018964	chr21,chr21	-,+	RSPH1,SLC37A1	-6090,-2800
chr5:68461445-68462688	chr5	+	68461841	68462603	True	NM_176816,NM_031966	chr5,chr5	-,+	CCDC125,CCNB1	153864,309
chr21:44774272-44775387	chr21	+	44774535	44775363	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	94540,71689
chr2:26629985-26630520	chr2	+	26629994	26630483	True	NM_153835,NM_145038	chr2,chr2	-,+	GPR113,CCDC164	-60309,-5274
chr7:94023464-94023692	chr7	+	94023543	94023621	True	NM_001099400,NM_000089	chr7,chr7	-,+	SGCE,COL1A2	261950,251
chr2:243030869-243031075	chr2	+	243030962	243031022	True	NM_005018	chr2	-	PDCD1	-229904
chr19:42461097-42461533	chr19	+	42461217	42461569	True	NM_006423,NM_199002	chr19,chr19	-,+	RABAC1,ARHGEF1	2009,-72822
chr8:8020828-8021379	chr8	+	8020831	8020967	True	NR_031689,NR_024362	chr8,chr8	-,+	MIR548I3,FLJ10661	-74220,65124
chr8:8020828-8021379	chr8	-	12359721	12359857	False	NR_026789,NM_001137610	chr8,chr8	+,-	FAM66A,FAM86B2	-140244,-65869
chr1:182371942-182373435	chr1	+	182372088	182372859	True	NR_034131,NM_172000	chr1,chr1	+,-	NCRNA00272,TEDDM1	3896,-2337
chr17:72199224-72199796	chr17	+	72199223	72199761	True	NM_000999,NR_026914,NM_032646,NM_001035258	chr17,chr17,chr17,chr17	+,-,+,+	RPL38,MGC16275,TTYH2,RPL38	33,9749,9934,33
chr2:61764646-61764967	chr2	+	61764674	61764884	True	NM_152392,NM_003400	chr2,chr2	+,-	AHSA2,XPO1	-360170,588
chr11:71639410-71639700	chr11	+	71639419	71639739	True	NR_024147,NR_029192,NR_024148,NM_018320	chr11,chr11,chr11,chr11	+,-,+,+	RNF121,LOC100133315,RNF121,RNF121	28,54,28,28
chr19:10223540-10223975	chr19	+	10223624	10223834	True	NM_002566,NM_003755,NM_001198690,NR_003688,NR_004381,NM_001040664,NM_020230	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+,+	P2RY11,EIF3G,PPAN-P2RY11,SNORD105B,SNORD105,PPAN-P2RY11,PPAN	-1478,6815,-6776,-3250,-5348,-6776,-6776
chr12:57146888-57148497	chr12	+	57147363	57148236	True	NM_000946,NM_003725	chr12,chr12	-,+	PRIM1,HSD17B6	-1217,8871
chr22:31891550-31892035	chr22	+	31891663	31892079	True	NM_001164501,NM_014775,NM_001007467,NM_001164502,NM_019843	chr22,chr22,chr22,chr22,chr22	-,+,+,-,-	EIF4ENIF1,SFI1,SFI1,EIF4ENIF1,EIF4ENIF1	-6116,181,181,-5789,-5789
chrX:64713141-64714410	chrX	+	64713278	64713900	True	NM_001010888,NM_001170649	chrX,chrX	+,-	ZC3H12B,LAS1L	-4726,40837
chr1:187040837-187041625	chr1	+	187040925	187041297	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-391366,-242947
chr3:133465384-133465666	chr3	+	133465479	133465651	True	NM_001063,NM_007027	chr3,chr3	+,-	TF,TOPBP1	-553,-84742
chr16:85610776-85611269	chr16	+	85610789	85611301	True	NM_001134473,NM_016095	chr16,chr16	+,-	KIAA0182,GINS2	33727,111337
chrX:100309504-100310922	chrX	+	100309732	100310824	True	NM_021637,NM_024917,NM_001167972,NM_001167971,NM_001167970	chrX,chrX,chrX,chrX,chrX	+,-,-,-,-	TMEM35,TRMT2B,TRMT2B,TRMT2B,TRMT2B	23011,-2627,-2627,-2627,-2627
chr8:94708578-94709665	chr8	+	94708754	94709692	True	NM_145269,NR_033858	chr8,chr8	+,-	FAM92A1,LOC642924	3080,3019
chr1:87379751-87380329	chr1	+	87379852	87380150	True	NM_203341,NM_001134492,NM_004261,NM_012262	chr1,chr1,chr1,chr1	-,+,-,+	SEP15,HS2ST1,SEP15,HS2ST1	7,184,7,184
chr2:133043620-133044537	chr2	+	133043622	133044572	True	NM_001508,NR_027020	chr2,chr2	+,-	GPR39,ANKRD30BL	129574,-28080
chr16:68005060-68005354	chr16	+	68005085	68005355	True	NM_001129758,NM_001145962,NM_001145963,NM_001145964,NM_001145961,NM_005072,NM_017803,NM_022357	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	-,-,-,-,-,-,+,-	DPEP3,SLC12A4,SLC12A4,SLC12A4,SLC12A4,SLC12A4,DUS2L,DPEP3	9147,-2488,-7117,-4304,-2488,-2488,51848,9147
chr10:47183889-47185416	chr10	+	47184363	47184867	True	NM_001137549,NM_001137548,NM_005972,NM_001137556	chr10,chr10,chr10,chr10	-,-,+,-	FAM25G,FAM25C,PPYR1,FAM25B	-2675,-2675,-100880,-2675
chr10:47183889-47185416	chr10	-	48244482	48244986	False	NM_001137549,NM_001137548,NM_002900,NM_001137556	chr10,chr10,chr10,chr10	+,+,-,+	FAM25G,FAM25C,RBP3,FAM25B	2675,2675,146055,2675
chr20:3713504-3713769	chr20	+	3713662	3713816	True	NM_052970,NM_001197327,NM_023068	chr20,chr20,chr20	+,+,-	HSPA12B,HSPA12B,SIGLEC1	-396,-396,-25887
chr3:108655031-108656839	chr3	+	108655398	108656616	True	NM_005459,NM_016388	chr3,chr3	-,+	GUCA1C,TRAT1	16119,-113820
chr11:45930615-45931084	chr11	+	45930673	45931045	True	NM_152312,NM_004813,NM_001080446,NM_057174	chr11,chr11,chr11,chr11	+,-,-,-	GYLTL1B,PEX16,C11orf94,PEX16	12150,8679,-1840,8679
chr12:6308606-6309156	chr12	+	6308638	6309102	True	NM_001769,NM_000552	chr12,chr12	+,-	CD9,VWF	379,-74802
chr3:156876143-156876465	chr3	+	156876143	156876470	True	NR_034008,NM_020307	chr3,chr3	+,-	LOC100498859,CCNL1	-68530,2069
chr16:2260306-2261018	chr16	+	2260400	2260892	True	NM_001199174,NM_001199175,NM_001199173,NM_182563,NM_022372,NM_001042371	chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,-,+,-	MLST8,MLST8,MLST8,C16orf79,MLST8,PGP	-4719,-5273,-5273,227,-5273,3980
chr8:109456171-109456431	chr8	+	109456232	109456418	True	NM_001568,NM_014673	chr8,chr8	-,+	EIF3E,TTC35	-195273,-430
chr17:7940480-7940774	chr17	+	7940689	7940811	True	NM_001141,NM_001139,NM_001039131,NM_001039130	chr17,chr17,chr17,chr17	+,-,+,+	ALOX15B,ALOX12B,ALOX15B,ALOX15B	1546,50260,1546,1546
chr17:18547790-18548223	chr17	+	18547847	18548267	True	NM_001037330,NM_001039397	chr17,chr17	+,-	TRIM16L,TBC1D28	77134,-107
chr17:18547790-18548223	chr17	-	15635103	15635153	False	NM_006470,NM_178571	chr17,chr17	-,+	TRIM16,TBC1D26	-48910,437
chr4:6198706-6199693	chr4	+	6198807	6199599	True	NM_001099433,NM_144720,NR_037863	chr4,chr4,chr4	-,-,+	JAKMIP1,JAKMIP1,LOC285484	2769,2769,2860
chr8:120425943-120427654	chr8	+	120426042	120427683	True	NM_002514,NM_001040092	chr8,chr8	+,-	NOV,ENPP2	868,223473
chr2:136635169-136635877	chr2	+	136635169	136635439	True	NM_014607,NM_005915	chr2,chr2	+,-	UBXN4,MCM6	-136035,-1158
chr19:10214029-10214623	chr19	+	10214381	10214447	True	NM_002566,NM_031917,NM_001198690,NR_003688,NR_004381,NM_001040664,NM_020230	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+,+	P2RY11,ANGPTL6,PPAN-P2RY11,SNORD105B,SNORD105,PPAN-P2RY11,PPAN	7749,-956,2451,5977,3879,2451,2451
chr5:139555531-139555818	chr5	+	139555653	139555863	True	NM_002622,NM_032412	chr5,chr5	-,+	PFDN1,C5orf32	126876,-1051
chr20:3140914-3141266	chr20	+	3141034	3141318	True	NM_014731,NM_014948,NM_199415,NM_021826,NM_033453	chr20,chr20,chr20,chr20,chr20	-,-,-,-,+	ProSAPiP1,UBOX5,UBOX5,FASTKD5,ITPA	7945,-494,-494,-502,48737
chr7:5633967-5634221	chr7	+	5634029	5634270	True	NM_001101,NM_003088	chr7,chr7	-,+	ACTB,FSCN1	-63797,-1626
chr6:1097922-1099724	chr6	+	1098231	1099733	True	NR_027116,NR_027115,NM_033260	chr6,chr6,chr6	-,-,+	LOC285768,LOC285768,FOXQ1	1884,1884,212941
chr3:30897173-30899093	chr3	+	30897178	30899132	True	NM_207359,NM_003242	chr3,chr3	-,+	GADL1,TGFBR2	37071,-249235
chr1:6671692-6672303	chr1	+	6671807	6672103	True	NM_014851,NM_153812	chr1,chr1	-,+	KLHL21,PHF13	-8878,1652
chr19:22824888-22825282	chr19	+	22824939	22825017	True	NM_020855,NM_001080409	chr19,chr19	+,-	ZNF492,ZNF99	-7873,127817
chr2:174298382-174299209	chr2	+	174298451	174299257	True	NM_145810,NR_033882	chr2,chr2	+,-	CDCA7,LOC339751	-78948,-151687
chr12:5509220-5510140	chr12	+	5509259	5510044	True	NM_020373,NM_001102654	chr12,chr12	-,+	ANO2,NTF3	545413,31235
chr3:43748205-43748597	chr3	+	43748221	43748536	True	NM_001204834,NM_016006	chr3,chr3	-,+	ANO10,ABHD5	-84661,-15910
chr16:68056581-68056867	chr16	+	68056628	68056814	True	NM_017803,NM_018380	chr16,chr16	+,-	DUS2L,DDX28	389,1006
chr20:24978329-24980006	chr20	+	24978663	24980043	True	NM_003650,NM_020531	chr20,chr20	+,-	CST7,C20orf3	-48848,-5238
chr2:134320289-134320861	chr2	+	134320385	134320865	True	NM_207363,NM_207481,NR_037450	chr2,chr2,chr2	-,-,+	NCKAP5,NCKAP5,MIR3679	5216,5216,563830
chr2:46923854-46925119	chr2	+	46924017	46925155	True	NM_144949,NM_173074,NM_014011	chr2,chr2,chr2	+,-,+	SOCS5,PIGF,SOCS5	1193,-79766,943
chr22:22903706-22904328	chr22	+	22903775	22904341	True	NR_027426,NM_006115,NM_206953,NM_206955,NM_206954,NM_206956	chr22,chr22,chr22,chr22,chr22,chr22	+,-,-,-,-,-	LOC648691,PRAME,PRAME,PRAME,PRAME,PRAME	-2073,-2079,-2079,-2225,-2079,-2225
chr1:15251348-15251879	chr1	+	15251502	15251837	True	NM_001018000,NM_001018001,NR_027136	chr1,chr1,chr1	+,+,-	KAZN,KAZN,C1orf126	-928,4458,227174
chr19:2900206-2900475	chr19	+	2900308	2900522	True	NM_021217,NM_173480	chr19,chr19	-,+	ZNF77,ZNF57	44497,373
chrX:77394897-77395233	chrX	+	77394931	77395141	True	NM_000291,NM_015975	chrX,chrX	+,-	PGK1,TAF9B	-35316,88
chr12:93395845-93396522	chr12	+	93396038	93396428	True	NM_001004330,NM_003566	chr12,chr12	+,-	PLEKHG7,EEA1	-265824,-72931
chr16:28564890-28565154	chr16	+	28565091	28565181	True	NM_138414,NM_012385	chr16,chr16	+,-	CCDC101,NUPR1	67,-14596
chr17:37983543-37985108	chr17	+	37983908	37984958	True	NM_012481,NM_198844	chr17,chr17	-,+	IKZF3,ZPBP2	35533,39496
chr5:156699360-156701067	chr5	+	156699364	156700387	True	NM_001037333,NM_001037332,NM_001001343,NM_014376	chr5,chr5,chr5,chr5	+,+,-,+	CYFIP2,CYFIP2,FNDC9,CYFIP2	-6324,-6228,72393,-3053
chr11:65149858-65150368	chr11	+	65150067	65150173	True	NM_031904,NM_182556,NM_001077241	chr11,chr11,chr11	+,-,-	FRMD8,SLC25A45,SLC25A45	3867,19,19
chrX:32137722-32139160	chrX	+	32137793	32139196	True	NM_203391,NM_004013	chrX,chrX	+,-	GK,DMD	-1466375,34441
chr6:166721089-166721334	chr6	+	166721151	166721344	True	NM_175922,NR_027284	chr6,chr6	-,+	PRR18,LOC441177	577,-320163
chr10:90993376-90994828	chr10	+	90993741	90994741	True	NM_001127605,NM_001547	chr10,chr10	-,+	LIPA,IFIT2	16969,66964
chr5:10620082-10620304	chr5	+	10620089	10620253	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-55705,141184
chr15:50650212-50651796	chr15	+	50650560	50651394	True	NR_026891,NR_024490,NM_181427,NM_016655,NM_005254,NM_002041,NM_016654	chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,+,-,-,-,-,-	FLJ10038,LOC100129387,GABPB1,GABPB1,GABPB1,GABPB1,GABPB1	-3484,-4247,-2955,-2955,-2955,-2955,-2955
chr22:31688152-31688896	chr22	+	31688243	31688795	True	NM_001135911,NM_052880,NM_016733	chr22,chr22,chr22	-,-,+	PIK3IP1,PIK3IP1,LIMK2	-17,-17,-43947
chr19:8568211-8568569	chr19	+	8568405	8568617	True	NM_032152,NM_031203	chr19,chr19	-,+	PRAM1,HNRNPM	-867,-58653
chr12:88525735-88526845	chr12	+	88525734	88526492	True	NM_025114,NM_181783	chr12,chr12	-,+	CEP290,TMTC3	9559,9580
chr13:113343634-113343914	chr13	+	113343798	113343934	True	NM_006322,NM_015205,NM_032189	chr13,chr13,chr13	-,+,+	TUBGCP3,ATP11A,ATP11A	-101317,708,708
chr1:18436099-18436506	chr1	+	18436384	18436544	True	NM_032880,NM_018715	chr1,chr1	+,-	IGSF21,RCC2	-2195,-670164
chr8:27472820-27473897	chr8	+	27472911	27473930	True	NM_001171138,NM_016240,NM_203339,NM_001831	chr8,chr8,chr8,chr8	-,+,-,-	CLU,SCARA3,CLU,CLU	-3643,17646,-3973,-584
chr1:222886335-222886585	chr1	+	222886392	222886632	True	NM_022831,NM_144695	chr1,chr1	-,+	AIDA,BROX	-528,-541
chr6:152015046-152015642	chr6	+	152015047	152015519	True	NM_017909,NM_001122742	chr6,chr6	-,+	RMND1,ESR1	-241731,-3474
chr11:59823211-59825170	chr11	+	59823492	59824751	True	NM_006138,NM_001031809,NM_001031666,NM_152851	chr11,chr11,chr11,chr11	+,+,+,-	MS4A3,MS4A3,MS4A3,MS4A6A	-26,-26,-26,125982
chrY:4955555-4957185	chrY	+	4955734	4957217	True	NM_032973,NR_001540	chrY,chrY	+,-	PCDH11Y,TTTY23	-31654,1154484
chrY:4955555-4957185	chrX	+	91122428	91122649	False	NM_001168363,NM_004538	chrX,chrX	+,-	PCDH11X,NAP1L3	-32033,1806090
chr16:74350815-74352356	chr16	+	74351193	74352205	True	NR_026950,NM_002811	chr16,chr16	-,+	LOC283922,PSMD7	49998,-20584
chr3:132034560-132035823	chr3	+	132034569	132035631	True	NM_001099,NM_001134194,NM_130808	chr3,chr3,chr3	+,+,-	ACPP,ACPP,CPNE4	579,579,-280725
chr5:10634280-10634779	chr5	+	10634320	10634574	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-69936,126868
chr1:151777185-151777704	chr1	+	151777306	151777748	True	NR_024237,NM_001004432	chr1,chr1	+,-	LOC100132111,LINGO4	33196,184
chr22:42323931-42324722	chr22	+	42323939	42324373	True	NM_052945,NR_024355	chr22,chr22	-,+	TNFRSF13C,LOC339674	-1118,23817
chr16:30254032-30255518	chr16	+	30254826	30255552	True	NR_002555,NM_177552	chr16,chr16	-,+	LOC613037,SULT1A3	1430,-44328
chr16:30254032-30255518	chr16	+	29514857	29515583	False	NR_002557,NM_177552	chr16,chr16	-,+	LOC613038,SULT1A3	-35958,-43701
chr16:30254032-30255518	chr16	-	22526875	22527197	False	NM_001135865,NR_027460	chr16,chr16	+,-	LOC100132247,RRN3P3	-2082,-77839
chr16:30254032-30255518	chr16	+	21434352	21434674	False	NR_026675,NM_130464	chr16,chr16	+,-	NCRNA00169,NPIPL3	-122233,2034
chr16:30254032-30255518	chr16	+	21866630	21866952	False	NM_003366,NR_003370	chr16,chr16	+,-	UQCRC2,RRN3P1	97656,-36135
chr6:118241463-118243249	chr6	+	118241496	118243268	True	NM_020399,NM_001029858	chr6,chr6	-,+	GOPC,SLC35F1	-317791,-12858
chr11:624177-624519	chr11	+	624205	624477	True	NM_004031,NM_000797,NM_004029,NM_001171968,NM_021924,NM_021920,NM_001572,NM_031264	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,+,-,-,-,-,-,-	IRF7,DRD4,IRF7,CDHR5,CDHR5,SCT,IRF7,CDHR5	-8477,12827,-8206,640,640,2746,-8206,640
chr16:30345679-30346054	chr16	+	30345713	30345903	True	NR_002453,NM_013292	chr16,chr16	-,+	LOC595101,MYLPF	842,40219
chr16:30345679-30346054	chr16	+	18936700	18936750	False	NM_015092,NM_024847	chr16,chr16	-,+	SMG1,TMC7	1026,58505
chr16:30345679-30346054	chr16	+	29605625	29605685	False	NR_002593,NM_001030288	chr16,chr16	-,+	SLC7A5P1,SPN	19403,68614
chr4:15471303-15471587	chr4	+	15471323	15471631	True	NM_001193534,NM_001080522,NM_020785,NM_001164720	chr4,chr4,chr4,chr4	-,+,+,+	FBXL5,CC2D2A,CC2D2A,CC2D2A	185454,-29,-29,-29
chr7:86281938-86283404	chr7	+	86281942	86283423	True	NM_152748,NM_000840	chr7,chr7	-,+	KIAA1324L,GRM3	311920,-8770
chrX:152990984-152991263	chrX	+	152991005	152991305	True	NM_001139441,NM_001139457,NM_000033,NM_005745,NR_024450	chrX,chrX,chrX,chrX,chrX	-,-,+,-,-	BCAP31,BCAP31,ABCD1,BCAP31,BCAP31	-1423,-1456,-733,-1167,-804
chr2:27590252-27590921	chr2	+	27590355	27590930	True	NM_015636,NM_001034116,NM_014748,NM_172195	chr2,chr2,chr2,chr2	-,-,+,-	EIF2B4,EIF2B4,SNX17,EIF2B4	2444,2444,2458,2039
chr2:20155457-20156472	chr2	+	20155463	20156199	True	NM_001006657,NR_033875	chr2,chr2	-,+	WDR35,FLJ12334	33743,-86908
chr4:52904333-52904690	chr4	+	52904353	52904739	True	NM_145263,NM_000232	chr4,chr4	+,-	SPATA18,SGCB	12853,-68
chr1:238053955-238055546	chr1	+	238054215	238055458	True	NR_027247,NM_021186	chr1,chr1	+,-	LOC100130331,ZP4	-28791,7
chr6:17989196-17990960	chr6	+	17989371	17990398	True	NM_001105568,NM_153042,NM_022113,NM_001105566,NM_001105567	chr6,chr6,chr6,chr6,chr6	-,+,-,-,-	KIF13A,KDM1B,KIF13A,KIF13A,KIF13A	-1572,165220,-1572,-1572,-1572
chr19:49623949-49624772	chr19	+	49623952	49624556	True	NM_018111,NM_003660,NM_022165	chr19,chr19,chr19	-,+,+	C19orf73,PPFIA3,LIN7B	-1555,-1340,-6385
chr1:244998171-244998411	chr1	+	244998197	244998322	True	NR_026778,NM_198076	chr1,chr1	-,+	NCRNA00201,FAM36A	11976,316
chr1:231006108-231007541	chr1	+	231006816	231007576	True	NM_001136494,NM_032800,NM_022786	chr1,chr1,chr1	-,-,+	C1orf198,C1orf198,ARV1	-1481,-2514,107246
chr6:20529663-20530699	chr6	+	20529726	20530241	True	NM_017774,NM_001080480	chr6,chr6	+,-	CDKAL1,MBOAT1	4446,-317056
chr17:48912708-48913023	chr17	+	48912728	48913022	True	NM_005749,NM_175575	chr17,chr17	-,+	TOB1,WFIKKN2	28441,-174
chr2:64066614-64067571	chr2	+	64066744	64067537	True	NM_006759,NM_001001521,NM_001005739	chr2,chr2,chr2	+,+,-	UGP2,UGP2,VPS54	1476,560,178733
chr1:236224705-236225654	chr1	+	236224704	236225663	True	NM_002508,NM_003272	chr1,chr1	-,+	NID1,GPR137B	2869,80168
chr9:21974184-21974577	chr9	+	21974238	21974481	True	NR_024274,NM_001195132,NM_000077,NM_058197	chr9,chr9,chr9,chr9	+,-,-,-	C9orf53,CDKN2A,CDKN2A,CDKN2A	-7158,701,701,395
chr13:50655712-50656037	chr13	+	50655943	50656081	True	NR_029485,NR_002605	chr13,chr13	-,+	MIR15A,DLEU1	-32606,332
chrX:10125007-10126407	chrX	+	10125068	10126356	True	NM_001830,NM_000273	chrX,chrX	+,-	CLCN4,GPR143	-135,-391063
chr17:34199512-34199984	chr17	+	34199680	34199895	True	NM_152781,NM_003487,NM_002985	chr17,chr17,chr17	-,+,-	C17orf66,TAF15,CCL5	-3785,-63250,7539
chr12:41092331-41094250	chr12	+	41092418	41093663	True	NM_175038,NM_001843,NM_052885	chr12,chr12,chr12	+,+,-	CNTN1,CNTN1,SLC2A13	-6118,-6118,-592757
chr9:14694172-14695070	chr9	+	14694192	14695108	True	NR_003920,NM_178566	chr9,chr9	+,-	LOC389705,ZDHHC21	298216,-712
chr2:111491968-111493258	chr2	+	111492157	111493057	True	NM_004336,NM_001142807	chr2,chr2	-,+	BUB1,ACOXL	-56473,-2065
chr1:35246984-35247186	chr1	+	35246984	35247070	True	NM_001164824,NM_024009,NM_001005752	chr1,chr1,chr1	-,+,+	C1orf212,GJB3,GJB3	77626,-245,840
chr19:36133133-36133996	chr19	+	36133296	36133883	True	NM_000704,NM_001863,NM_014209	chr19,chr19,chr19	-,+,+	ATP4A,COX6B1,ETV2	-78736,5241,-700
chr15:32908913-32909763	chr15	+	32908920	32909642	True	NM_014783,NM_199357,NR_036650	chr15,chr15,chr15	+,+,-	ARHGAP11A,ARHGAP11A,LOC100288615	-1280,-1280,-82978
chr15:32908913-32909763	chr15	+	30919532	30920252	False	NM_148911,NM_001039841	chr15,chr15	-,+	CHRFAM7A,ARHGAP11B	-233668,-704
chr11:65685479-65686032	chr11	+	65685487	65685917	True	NM_031450,NM_001135635,NM_006442	chr11,chr11,chr11	-,-,+	C11orf68,C11orf68,DRAP1	664,664,810
chr7:130020350-130021207	chr7	+	130020563	130021163	True	NM_001868,NM_018718	chr7,chr7	+,-	CPA1,TSGA14	-324,59741
chr9:123691719-123692316	chr9	+	123691777	123692155	True	NM_001190945,NR_024408,NM_005658	chr9,chr9,chr9	-,+,-	TRAF1,LOC253039,TRAF1	-326,-86508,-2604
chr12:132512882-132513256	chr12	+	132512944	132513262	True	NM_175066,NR_002979	chr12,chr12	-,+	DDX51,SNORA49	115668,2506
chr11:78128202-78128431	chr11	+	78128365	78128443	True	NM_080491,NM_020798	chr11,chr11	-,+	GAB2,USP35	475,-228561
chr3:156534427-156534710	chr3	+	156534622	156534698	True	NM_001004316,NR_003284,NM_001193283	chr3,chr3,chr3	+,-,+	LEKR1,PA2G4P4,LEKR1	9397,-4812,9449
chr3:53083251-53083568	chr3	+	53083342	53083407	True	NM_016329,NM_006254,NM_001005158,NM_001005159	chr3,chr3,chr3,chr3	-,+,-,-	SFMBT1,PRKCD,SFMBT1,SFMBT1	-3253,111815,-3253,-4007
chr7:34712470-34713016	chr7	+	34712513	34713043	True	NR_033664,NM_207173	chr7,chr7	-,+	AAA1,NPSR1	84891,-14667
chr5:134316900-134317567	chr5	+	134317196	134317519	True	NM_002653,NM_178019	chr5,chr5	-,+	PITX1,CATSPER3	52500,-13659
chr10:102108202-102108925	chr10	+	102108303	102108877	True	NM_016112,NM_005063	chr10,chr10	-,+	PKD2L1,SCD	-18060,-1582
chr7:105309168-105311130	chr7	+	105309995	105311094	True	NM_138495,NM_021930	chr7,chr7	-,+	ATXN7L1,RINT1	8577,-137514
chr12:49297650-49297955	chr12	+	49297791	49297936	True	NM_001143781,NM_033124	chr12,chr12	-,+	FKBP11,CCDC65	20778,-36
chr11:18717605-18718057	chr11	+	18717858	18718058	True	NM_153347,NM_173588	chr11,chr11	+,-	TMEM86A,IGSF22	2292,29769
chr14:96001852-96002523	chr14	+	96001939	96002406	True	NM_016417,NR_003002,NR_003138,NR_001459	chr14,chr14,chr14,chr14	+,-,-,-	GLRX5,SCARNA13,SNHG10,SNHG10	-670,-1973,-730,-730
chr3:58478267-58478714	chr3	+	58478298	58478700	True	NM_153331,NM_003500,NM_001128214	chr3,chr3,chr3	+,-,+	KCTD6,ACOX2,KCTD6	5391,44285,-532
chr5:179923052-179923391	chr5	+	179923187	179923435	True	NM_052863,NM_015455	chr5,chr5	-,+	SCGB3A1,CNOT6	95102,-1831
chr15:40680131-40680622	chr15	+	40680245	40680317	True	NM_001142762,NM_001142761,NM_207380,NM_033286	chr15,chr15,chr15,chr15	+,+,-,+	C15orf23,C15orf23,C15orf52,C15orf23	-5378,-5378,-47077,-5378
chr3:48724580-48726261	chr3	+	48724635	48726179	True	NM_016453,NM_033629,NM_184231	chr3,chr3,chr3	-,+,-	NCKIPSD,TREX1,NCKIPSD	-1301,-217457,-1301
chr20:30029617-30030502	chr20	+	30029706	30030371	True	NM_153324,NM_001171832	chr20,chr20	+,-	DEFB123,DEFB121	-1358,-29065
chr19:47775581-47776555	chr19	+	47775605	47776427	True	NR_037675,NM_178511,NM_001127242	chr19,chr19,chr19	+,+,-	PRR24,PRR24,BBC3	1231,1175,-39582
chr22:41842084-41842325	chr22	+	41842115	41842311	True	NM_001098,NM_016272	chr22,chr22	+,-	ACO2,TOB2	22817,766
chr12:7920370-7921250	chr12	+	7920608	7921064	True	NM_203503,NM_001145465	chr12,chr12	-,+	CLEC4C,NANOGNB	-18539,-2857
chr6:15067545-15068002	chr6	+	15067613	15067717	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	178809,595622
chr10:124028394-124028840	chr10	+	124028476	124028776	True	NM_017615,NM_144587	chr10,chr10	-,+	NSMCE4A,BTBD16	-293733,2044
chr19:36156681-36157280	chr19	+	36156727	36157297	True	NM_024660,NM_007000	chr19,chr19	-,+	IGFLR1,UPK1A	76104,417
chr3:5019515-5019923	chr3	+	5019673	5019835	True	NR_037903,NM_003670	chr3,chr3	-,+	LOC100507582,BHLHE40	-71487,1261
chr19:47618172-47618739	chr19	+	47618365	47618425	True	NM_015168,NM_001145713	chr19,chr19	-,+	ZC3H4,SAE1	-1356,15654
chr7:27204100-27204444	chr7	+	27204105	27204429	True	NM_152739,NR_029911,NM_006896,NR_002795,NM_018951	chr7,chr7,chr7,chr7,chr7	-,-,-,+,-	HOXA9,MIR196B,HOXA7,HOXA11-AS1,HOXA10	770,4803,-7809,20597,9576
chr12:104350413-104350763	chr12	+	104350453	104350812	True	NM_003211,NM_001135570	chr12,chr12	+,-	TDG,C12orf73	8780,231
chr14:105554179-105554449	chr14	+	105554268	105554366	True	NM_174891,NM_013345	chr14,chr14	+,-	C14orf79,GPR132	-101704,-22514
chr13:73300491-73301053	chr13	+	73300665	73301049	True	NM_001071775,NM_024808	chr13,chr13	-,+	MZT1,C13orf34	940,992
chr19:14785231-14786468	chr19	+	14785362	14786088	True	NM_032433,NM_032571	chr19,chr19	+,-	ZNF333,EMR3	14781,-92
chr13:22018217-22019049	chr13	+	22018327	22018919	True	NM_153251,NM_002010	chr13,chr13	-,+	ZDHHC20,FGF9	14647,226295
chr5:40930787-40931951	chr5	+	40931096	40931685	True	NM_000587,NM_000997	chr5,chr5	+,-	C7,RPL37	-21556,-95709
chr2:3524615-3526575	chr2	+	3524663	3526529	True	NM_001011,NM_018269	chr2,chr2	+,-	RPS7,ADI1	96323,-1313
chr12:102469334-102471248	chr12	+	102469669	102471271	True	NM_017915,NM_016053	chr12,chr12	+,-	C12orf48,CCDC53	42684,-13770
chr4:37244938-37245330	chr4	+	37244947	37245305	True	NM_001085399,NM_001144990	chr4,chr4	-,+	RELL1,KIAA1239	442744,1384
chr9:115478615-115478946	chr9	+	115478705	115478957	True	NM_001012994,NM_021218	chr9,chr9	+,-	SNX30,C9orf80	34176,1480
chr16:15981858-15982100	chr16	+	15981963	15982093	True	NM_144600,NM_004996	chr16,chr16	-,+	FOPNL,ABCC1	404,61340
chr5:121478873-121480059	chr5	+	121478896	121480097	True	NM_002317,NM_207317	chr5,chr5	-,+	LOX,ZNF474	-64841,-13733
chr11:3401187-3402073	chr11	+	3401353	3402013	True	NM_001130519,NM_001130520,NM_007152,NR_024248	chr11,chr11,chr11,chr11	-,-,-,+	ZNF195,ZNF195,ZNF195,LOC650368	-905,-905,-905,177
chr3:125239650-125239974	chr3	+	125239830	125240010	True	NR_024250,NM_003794	chr3,chr3	+,-	LOC100125556,SNX4	395433,-772
chrX:19002713-19002925	chrX	+	19002887	19002973	True	NM_000292,NR_029379	chrX,chrX	-,+	PHKA2,LOC100132163	-407,-94524
chr22:41461069-41462069	chr22	+	41461569	41461941	True	NM_138481,NR_031694	chr22,chr22	-,+	CHADL,MIR1281	175044,26575
chr1:175702355-175702580	chr1	+	175702358	175702578	True	NM_003285,NM_022093	chr1,chr1	-,+	TNR,TNN	10224,-665415
chr19:2164609-2164962	chr19	+	2164684	2165015	True	NM_003938,NM_032482	chr19,chr19	-,+	AP3D1,DOT1L	-13128,-587
chr17:29720132-29720520	chr17	+	29720164	29720456	True	NM_014210,NM_032932	chr17,chr17	-,+	EVI2A,RAB11FIP4	-71397,-1573
chr5:170292360-170293398	chr5	+	170292423	170293295	True	NM_004137,NM_022897	chr5,chr5	-,+	KCNMB1,RANBP17	-475785,-3578
chr10:1068053-1068565	chr10	+	1068434	1068598	True	NM_033261,NR_024628,NR_024629,NR_027708,NR_027709	chr10,chr10,chr10,chr10,chr10	-,+,+,+,+	IDI2,IDI2-AS1,IDI2-AS1,IDI2-AS1,IDI2-AS1	3251,-22,-22,-22,-22
chr3:12046616-12047000	chr3	+	12046671	12046988	True	NM_003256,NM_133625,NM_003178	chr3,chr3,chr3	-,+,+	TIMP4,SYN2,SYN2	153913,-865,-865
chr7:33079750-33080494	chr7	+	33079762	33080522	True	NM_016489,NM_001166118,NM_007270	chr7,chr7,chr7	-,-,+	NT5C3,NT5C3,FKBP9	50,49,-82821
chr5:148755886-148757426	chr5	+	148756052	148757098	True	NM_024028,NM_014443	chr5,chr5	+,-	PCYOX1L,IL17B	-18533,1790
chr8:77593351-77593649	chr8	+	77593443	77593655	True	NM_024721,NR_024360	chr8,chr8	+,-	ZFHX4,LOC100192378	3,1905
chr13:34440118-34441871	chr13	+	34440208	34441706	True	NM_181558,NM_178006	chr13,chr13	+,-	RFC3,STARD13	-48060,-580307
chr16:23609592-23610278	chr16	+	23609685	23610330	True	NM_019116,NM_005003	chr16,chr16	+,-	UBFD1,NDUFAB1	-40880,-2046
chr19:18634417-18635093	chr19	+	18634417	18634967	True	NM_001171948,NM_006532	chr19,chr19	+,-	C19orf50,ELL	33604,-1480
chr5:35046165-35047331	chr5	+	35046217	35047224	True	NM_194283,NM_031900	chr5,chr5	+,-	DNAJC21,AGXT2	-116570,1067
chr16:66864960-66866564	chr16	+	66865089	66866604	True	NM_003905,NM_005182,NM_001018159,NM_001018160	chr16,chr16,chr16,chr16	-,+,-,-	NAE1,CA7,NAE1,NAE1	-210,11677,-210,-210
chr1:44445749-44445977	chr1	+	44445754	44446002	True	NM_003780,NM_004047,NM_001005417,NM_006934,NM_001039457	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	B4GALT2,ATP6V0B,B4GALT2,SLC6A9,ATP6V0B	-939,-5203,180,37045,-5203
chr19:41509273-41510024	chr19	+	41509282	41510011	True	NM_030589,NM_000767	chr19,chr19	-,+	CYP2A7,CYP2B6	-120625,-12137
chr11:6244838-6245707	chr11	+	6244936	6245638	True	NM_001037329,NM_001098794	chr11,chr11	+,-	CNGA4,FAM160A2	14691,10353
chr19:6459745-6460537	chr19	+	6459900	6460364	True	NM_139161,NM_174881,NM_024103	chr19,chr19,chr19	+,+,-	CRB3,CRB3,SLC25A23	3895,3895,-119
chr6:26153604-26154119	chr6	+	26153741	26153878	True	NM_138720,NM_003526,NM_005321,NM_021063	chr6,chr6,chr6,chr6	+,-,+,+	HIST1H2BD,HIST1H2BC,HIST1H1E,HIST1H2BD	4470,-29609,2680,4470
chr12:16035895-16036970	chr12	+	16035909	16036917	True	NM_004447,NM_007178	chr12,chr12	-,+	EPS8,STRAP	-93399,-672
chr21:43809797-43810344	chr21	+	43809890	43810358	True	NM_024022,NM_032405,NM_001001895,NR_027348	chr21,chr21,chr21,chr21	-,-,+,-	TMPRSS3,TMPRSS3,UBASH3A,TMPRSS3	5892,5892,13660,-637
chr7:30028082-30028294	chr7	+	30028082	30028342	True	NM_001197026,NM_001145513,NM_001145515,NM_014766,NM_001145514	chr7,chr7,chr7,chr7,chr7	+,-,-,-,-	PLEKHA8,SCRN1,SCRN1,SCRN1,SCRN1	39634,1442,1133,1133,1613
chr17:27228509-27229110	chr17	+	27228690	27229138	True	NM_144683,NM_005702,NM_004475	chr17,chr17,chr17	-,+,-	DHRS13,ERAL1,FLOT2	1001,-46698,-3975
chr3:51429435-51429726	chr3	+	51429443	51429769	True	NM_001171904,NM_006010,NM_013286	chr3,chr3,chr3	-,+,+	VPRBP,MANF,RBM15B	104299,-6802,-795
chr7:128002354-128002599	chr7	+	128002362	128002539	True	NM_001114726,NM_001098786,NM_001174164	chr7,chr7,chr7	-,+,-	PRRT4,C7orf68,PRRT4	-623,93344,-623
chr11:64547137-64547644	chr11	+	64547226	64547665	True	NM_001178030,NM_001178031,NM_004630,NM_201997,NM_006244,NM_201995,NR_033649,NM_201998,NR_033650	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,+,-,-,-,-	SF1,SF1,SF1,SF1,PPP2R5B,SF1,SF1,SF1,SF1	-1288,-1994,-910,-910,144477,-910,-910,-910,-910
chr5:177580338-177580633	chr5	+	177580338	177580465	True	NM_022762,NM_017838,NM_001034833	chr5,chr5,chr5	+,-,-	RMND5B,NHP2,NHP2	-22361,551,551
chr15:34319652-34321601	chr15	+	34319760	34321581	True	NM_020371,NM_012125	chr15,chr15	-,+	AVEN,CHRM5	9773,-58723
chr14:105333904-105334558	chr14	+	105333910	105334580	True	NM_015005,NM_001112726,NM_001014432	chr14,chr14,chr14	+,+,-	KIAA0284,KIAA0284,AKT1	-2311,-2311,-71830
chr5:115428369-115429046	chr5	+	115428369	115429063	True	NM_016144,NR_033363	chr5,chr5	+,-	COMMD10,ATG12	-7700,-250821
chr5:167913564-167913959	chr5	+	167913698	167913998	True	NM_002887,NR_029520	chr5,chr5	+,-	RARS,MIR103-1	-286,74030
chr7:102984576-102984894	chr7	+	102984591	102984881	True	NM_001204453,NM_001129887,NM_002803,NM_014377	chr7,chr7,chr7,chr7	+,-,+,-	PSMC2,DNAJC2,PSMC2,DNAJC2	3089,489,3089,489
chr4:189656536-189657589	chr4	+	189656755	189657386	True	NM_173553,NR_033869	chr4,chr4	-,+	TRIML2,LOC401164	-630347,-280074
chr22:32595376-32595597	chr22	+	32595453	32595635	True	NM_006605,NR_033411,NM_001098527,NM_001159546,NM_001159545	chr22,chr22,chr22,chr22,chr22	-,+,-,-,-	RFPL2,SLC5A1,RFPL2,RFPL2,RFPL2	-5987,-140347,3879,2952,5133
chr16:31130561-31131050	chr16	+	31130765	31130945	True	NM_002773,NM_032188,NM_182958	chr16,chr16,chr16	-,+,+	PRSS8,MYST1,MYST1	16262,-1838,-1838
chr16:70380371-70380789	chr16	+	70380567	70380781	True	NM_018332,NM_001605	chr16,chr16	+,-	DDX19A,AARS	42,-57155
chr5:80257334-80257975	chr5	+	80257365	80257992	True	NM_006909,NM_000791	chr5,chr5	+,-	RASGRF2,DHFR	-858,-306565
chr15:30686318-30688002	chr15	+	30686422	30687692	True	NM_148911,NM_139320,NR_026858	chr15,chr15,chr15	-,-,+	CHRFAM7A,CHRFAM7A,FAM7A1	-558,-558,177065
chr15:30686318-30688002	chr15	+	32728051	32729041	False	NR_027470,NR_026859,NR_026858,NM_199357	chr15,chr15,chr15,chr15	-,-,-,+	FAM7A2,FAM7A3,FAM7A1,ARHGAP11A	-801,-986,-801,178649
chr15:30686318-30688002	chr15	-	30862956	30863946	False	NR_027470,NM_148911,NR_026858	chr15,chr15,chr15	+,-,+	FAM7A2,CHRFAM7A,FAM7A1	811,-177092,811
chr15:30686318-30688002	chr15	-	30393959	30395229	False	NR_026859,NM_175610	chr15,chr15	+,-	FAM7A3,TJP1	705,-279253
chr17:27406832-27407037	chr17	+	27406893	27406997	True	NM_016518,NM_004740	chr17,chr17	+,-	PIPOX,TIAF1	-37026,-4266
chr14:59655042-59655265	chr14	+	59655047	59655303	True	NM_014992,NM_022571	chr14,chr14	+,-	DAAM1,GPR135	95,276806
chr17:8266872-8268071	chr17	+	8267581	8268012	True	NM_213597,NM_153007,NR_024447	chr17,chr17,chr17	-,+,-	KRBA2,ODF4,LOC100128288	6896,-24454,-3722
chr1:53196867-53198151	chr1	+	53197021	53197972	True	NM_024646,NM_023077	chr1,chr1	+,-	ZYG11B,SELRC1	-4941,-32983
chr19:664336-664732	chr19	+	664362	664624	True	NM_005860,NM_194460	chr19,chr19	+,-	FSTL3,RNF126	11764,-1129
chrX:153283643-153284094	chrX	+	153283843	153284117	True	NR_031757,NM_001569,NR_036174,NM_001025242,NM_001025243	chrX,chrX,chrX,chrX,chrX	-,-,+,-,-	MIR718,IRAK1,MIR3202-1,IRAK1,IRAK1	1373,1275,-37346,1275,1275
chr17:40835776-40835999	chr17	+	40835801	40835971	True	NM_016602,NM_024927,NM_003632	chr17,chr17,chr17	-,-,+	CCR10,PLEKHH3,CNTNAP1	-1956,-6753,-1220
chr17:55161441-55162199	chr17	+	55161634	55162162	True	NM_004645,NM_003488	chr17,chr17	-,+	COIL,AKAP1	-123223,390
chr12:27549468-27550913	chr12	+	27549468	27550810	True	NM_001080406,NM_020183	chr12,chr12	-,+	C12orf71,ARNTL2	-314013,-63531
chr16:66995625-66996081	chr16	+	66995802	66996044	True	NM_001185177,NM_001185176,NM_024922,NR_024525	chr16,chr16,chr16,chr16	+,+,+,-	CES3,CES3,CES3,FAM96B	-735,5333,-735,-27482
chr4:25524347-25525394	chr4	+	25524649	25525285	True	NM_015187,NM_001177998	chr4,chr4	-,+	SEL1L3,SLC34A2	339375,132149
chr6:165722928-165723305	chr6	+	165722956	165723258	True	NM_144980,NR_027284	chr6,chr6	-,+	C6orf118,LOC441177	11,677780
chr7:43800662-43802509	chr7	+	43800684	43802168	True	NM_000712,NM_018224	chr7,chr7	+,-	BLVRA,C7orf44	-2463,-31601
chr16:87797064-87798081	chr16	+	87797279	87797938	True	NM_020655,NM_001184856,NM_017566,NM_001184854	chr16,chr16,chr16,chr16	+,-,-,-	JPH3,KLHDC4,KLHDC4,KLHDC4	-160837,1711,1711,1711
chr3:9689119-9689669	chr3	+	9689143	9689671	True	NM_001077526,NM_198560,NM_022485,NM_001077525	chr3,chr3,chr3,chr3	+,-,+,+	MTMR14,LHFPL4,MTMR14,MTMR14	1445,-93657,1445,1445
chrX:44699890-44701324	chrX	+	44700162	44701029	True	NM_022076,NM_173794	chrX,chrX	+,-	DUSP21,FUNDC1	2219,-297941
chr11:71712450-71713743	chr11	+	71712529	71713612	True	NM_001145055,NM_001145057,NM_001039660,NM_001039659,NM_005699,NM_173042,NR_036123,NM_173044	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,+,-,+	IL18BP,IL18BP,IL18BP,IL18BP,IL18BP,IL18BP,MIR3165,IL18BP	-1607,-1917,-2622,-2622,-2471,-2471,69793,-2622
chr21:33246771-33247249	chr21	+	33246789	33247258	True	NM_020706,NM_014586	chr21,chr21	-,+	SCAF4,HUNK	-142358,-1212
chr9:36260127-36260720	chr9	+	36260320	36260547	True	NM_001190383,NM_007096,NM_001190384,NM_005476	chr9,chr9,chr9,chr9	-,+,-,-	GNE,CLTA,GNE,GNE	-1824,-69518,-1824,-1824
chr17:74235340-74235633	chr17	+	74235342	74235617	True	NM_052916,NM_182565	chr17,chr17	-,+	RNF157,FAM100B	830,25668
chr11:58497569-58499334	chr11	+	58497947	58499371	True	NM_005838,NM_000614,NM_201648	chr11,chr11,chr11	-,+,-	GLYAT,CNTF,GLYAT	126,-107852,126
chrX:152802353-152802554	chrX	+	152802452	152802580	True	NM_001130997,NM_001001344,NM_021949	chrX,chrX,chrX	-,+,+	FAM58A,ATP2B3,ATP2B3	62102,-923,-923
chr9:115091410-115092216	chr9	+	115091772	115092125	True	NM_005156,NM_001163788,NM_001195822,NM_001163790	chr9,chr9,chr9,chr9	-,-,+,-	ROD1,ROD1,HSDL2,ROD1	3880,3880,50063,3880
chr15:40986562-40986924	chr15	+	40986563	40986937	True	NM_133487,NM_018145,NM_001164269,NM_001164270,NM_002875	chr15,chr15,chr15,chr15,chr15	+,-,+,+,+	RAD51,FAM82A2,RAD51,RAD51,RAD51	389,60571,440,389,389
chr12:27864880-27865916	chr12	+	27865154	27865641	True	NM_021821,NM_001146221,NM_001190864	chr12,chr12,chr12	+,-,+	MRPS35,LOC100287284,MRPS35	-1499,58625,-1499
chrX:20005716-20006125	chrX	+	20005743	20006099	True	NR_024440,NM_001173456	chrX,chrX	-,+	LOC729609,PDHA1	1848,-643791
chr7:8007996-8008370	chr7	+	8007995	8008315	True	NM_138426,NM_002947	chr7,chr7	+,-	GLCCI1,RPA3	107,-249757
chr3:124604547-124604807	chr3	+	124604552	124604843	True	NM_002213,NR_033437	chr3,chr3	-,+	ITGB5,UMPS	1362,-155392
chr19:53633240-53633952	chr19	+	53633352	53633868	True	NM_001164309,NR_028343,NM_001191055,NM_018355,NM_001136038	chr19,chr19,chr19,chr19,chr19	-,-,+,-,-	ZNF415,ZNF415,HERV-V2,ZNF415,ZNF415	2365,2367,-85420,2339,2365
chr2:242498042-242498264	chr2	+	242498147	242498207	True	NM_032515,NR_033346	chr2,chr2	+,-	BOK,BOK-AS1	-6,401
chr9:37486542-37488515	chr9	+	37486719	37488513	True	NM_022490,NM_014872	chr9,chr9	+,-	POLR1E,ZBTB5	-825,-21312
chr9:100000564-100001340	chr9	+	100000671	100001383	True	NR_036528,NR_036529,NM_199005,NR_036526,NR_036527	chr9,chr9,chr9,chr9,chr9	+,+,-,+,+	LOC57653,LOC57653,ZNF322B,LOC100499484,LOC57653	-14,-14,-38761,-14,-14
chr8:101965047-101965253	chr8	+	101965089	101965295	True	NM_145690,NM_001135702,NM_001135701,NM_001135700,NM_003406,NM_001135699,NR_033962	chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,-,-,+	YWHAZ,YWHAZ,YWHAZ,YWHAZ,YWHAZ,YWHAZ,FLJ42969	-732,-2290,-1529,-1529,378,-24,98986
chr16:30409296-30409509	chr16	+	30409350	30409438	True	NM_001142305,NM_152652,NM_016643,NM_052838	chr16,chr16,chr16,chr16	+,+,+,-	ZNF771,ZNF48,ZNF771,SEPT1	9296,-2344,9296,-15179
chr2:114457424-114458695	chr2	+	114457553	114458386	True	NM_013412,NM_025181	chr2,chr2	+,-	RABL2A,SLC35F5	-72788,56064
chr18:3451604-3451944	chr18	+	3451734	3451959	True	NM_019856,NM_173211,NM_173210,NM_003244,NM_170695,NM_173208,NM_173209,NM_173207	chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18	-,+,+,+,+,+,+,+	MYOM1,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1	-231628,1812,-194,-1613,-194,-1754,-1812,-4177
chr11:63934683-63936403	chr11	+	63935036	63936358	True	NM_006819,NM_014067	chr11,chr11	+,-	STIP1,MACROD1	17228,-1451
chr7:75675090-75675684	chr7	+	75675119	75675593	True	NM_016086,NM_005918	chr7,chr7	-,+	STYXL1,MDH2	1778,1799
chr5:152890143-152891378	chr5	+	152890174	152891390	True	NM_018691,NM_001114183	chr5,chr5	-,+	FAM114A2,GRIA1	527157,-20142
chrX:101140110-101141635	chrX	+	101140113	101141524	True	NM_080390,NR_036431	chrX,chrX	+,-	TCEAL2,ZMAT1	239135,3724
chr7:64023466-64024346	chr7	+	64023570	64024163	True	NM_178558,NM_001130022,NR_033245	chr7,chr7,chr7	-,-,+	ZNF680,ZNF680,LOC641746	-65,-65,18824
chr3:152879610-152879866	chr3	+	152879617	152879803	True	NM_002886,NM_001123228	chr3,chr3	+,-	RAP2B,TMEM14E	225,-820838
chr15:51972544-51973532	chr15	+	51972665	51973475	True	NM_013243,NM_153374,NM_001165257	chr15,chr15,chr15	+,-,+	SCG3,LYSMD2,SCG3	74,56895,74
chr6:128840635-128840845	chr6	+	128840720	128840802	True	NM_002844,NM_001135648,NM_000426	chr6,chr6,chr6	-,-,+	PTPRK,PTPRK,LAMA2	1067,1118,363483
chr9:136039229-136039431	chr9	+	136039285	136039359	True	NM_021996,NR_001275	chr9,chr9	-,+	GBGT1,CELP	2,-81410
chr7:138147378-138147773	chr7	+	138147446	138147602	True	NM_174959,NM_015905,NM_003852	chr7,chr7,chr7	-,+,+	SVOPL,TRIM24,TRIM24	201419,-2426,-2426
chrX:53192858-53193843	chrX	+	53193248	53193771	True	NM_022117,NM_001146702	chrX,chrX	+,-	TSPYL2,KDM5C	-81764,60889
chr1:43229265-43229947	chr1	+	43229388	43229542	True	NM_022356,NM_001146289,NM_024097	chr1,chr1,chr1	-,-,+	LEPRE1,LEPRE1,C1orf50	3263,3263,3373
chrY:2655557-2657506	chrY	+	2655577	2657524	True	NR_003254,NM_003140	chrY,chrY	+,-	XGPY2,SRY	-35291,-50
chr6:43484702-43485062	chr6	+	43484796	43485090	True	NM_004875,NM_001012974,NM_203290,NM_015388	chr6,chr6,chr6,chr6	+,-,+,-	POLR1C,C6orf154,POLR1C,YIPF3	-56,-6372,-70,-68
chr17:74500043-74500282	chr17	+	74500190	74500292	True	NR_033357,NM_024599	chr17,chr17	+,-	PRCD,RHBDF2	23375,-2681
chr13:36761898-36763342	chr13	+	36762290	36763385	True	NM_017826,NM_001111046	chr13,chr13	-,+	SOHLH2,CCNA1	25418,242581
chr5:10624529-10624896	chr5	+	10624578	10624910	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-60194,136527
chr3:36935234-36936792	chr3	+	36935655	36936823	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	49775,98017
chr17:43505273-43505572	chr17_ctg5_hap1	+	120471	120687	False	NM_001113738,NM_174919,NM_199282	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	+,-,-	ARL17A,ARHGAP27,ARHGAP27	75033,4770,-2335
chr17:43505273-43505572	chr17	+	43505346	43505562	True	NR_024435,NM_174919,NM_199282	chr17,chr17,chr17	+,-,-	LOC100133991,ARHGAP27,ARHGAP27	-165839,4770,-2334
chr6:26272648-26273360	chr6	+	26272750	26273220	True	NM_003525,NM_003534	chr6,chr6	+,-	HIST1H2BI,HIST1H3G	-17,-1138
chr7:17923356-17925305	chr7	+	17923389	17925095	True	NM_001204144,NM_015132	chr7,chr7	+,-	HDAC9,SNX13	201476,55096
chr7:152142956-152143886	chr7	+	152143386	152143926	True	NR_002935,NM_170606	chr7,chr7	+,-	FABP5P3,MLL3	-9457,-10296
chr12:57165333-57166335	chr12	+	57165705	57166206	True	NM_000946,NM_003725	chr12,chr12	-,+	PRIM1,HSD17B6	-19559,-8651
chr9:220879-221312	chr9	+	221027	221312	True	NM_203447,NM_152569	chr9,chr9	+,-	DOCK8,C9orf66	-6213,-5134
chr10:79793052-79793351	chr10	+	79793235	79793356	True	NM_001026,NM_007055,NM_001142282,NM_001142283,NM_001142284,NM_033022,NM_001142285	chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,-,+,+,+,+,+	RPS24,POLR3A,RPS24,RPS24,RPS24,RPS24,RPS24	161,-3937,161,161,161,161,161
chr16:14169562-14170210	chr16	+	14169596	14169747	True	NM_014048,NM_001134477	chr16,chr16	+,-	MKL2,PARN	-4459,554428
chr11:65795013-65795677	chr11	+	65795244	65795378	True	NM_001323,NM_053054	chr11,chr11	+,-	CST6,CATSPER1	-15841,-1256
chr9:117159874-117160176	chr9	+	117159884	117160203	True	NM_030767,NM_000608	chr9,chr9	-,+	AKNA,ORM2	-3199,-67866
chr3:49312811-49313054	chr3	+	49312810	49312930	True	NM_198562,NR_036233	chr3,chr3	-,+	C3orf62,MIR4271	1628,-1308
chr2:1417104-1418806	chr2	+	1417167	1418766	True	NM_175721,NM_175719,NM_012293,NM_175722,NM_000547	chr2,chr2,chr2,chr2,chr2	+,+,-,+,+	TPO,TPO,PXDN,TPO,TPO	-3,15,329575,-3,15
chr4:71245144-71245699	chr4	+	71245342	71245747	True	NM_144646,NM_006685	chr4,chr4	-,+	IGJ,SMR3B	286656,3047
chr20:54580625-54580951	chr20	+	54580702	54580986	True	NM_080617,NM_019888	chr20,chr20	-,+	CBLN4,MC3R	-690,242801
chr6:28474663-28475586	chr6	+	28474670	28475205	True	NM_182701,NM_001509	chr6,chr6	-,+	GPX6,GPX5	8422,18583
chr1:149789520-149790864	chr1	+	149789879	149790556	True	NM_001024599,NM_001161334,NM_001123375,NM_001034077	chr1,chr1,chr1,chr1	-,-,-,+	HIST2H2BF,HIST2H2BF,HIST2H3D,HIST2H4B	-5951,-5951,-4643,13664
chr1:149789520-149790864	chr1	-	120899361	120900040	False	NR_027337,NM_001004340	chr1,chr1	+,-	HIST2H2BA,FCGR1B	5993,35954
chr1:149789520-149790864	chr1	+	149405171	149405850	False	NR_027484,NM_001024599	chr1,chr1	+,-	FCGR1C,HIST2H2BF	-35928,-5942
chr1:149789520-149790864	chr1	-	149846409	149847088	False	NM_003517,NM_003528	chr1,chr1	+,-	HIST2H2AC,HIST2H2BE	11436,11194
chr1:155713417-155714281	chr1	+	155713535	155714198	True	NM_139118,NR_024117	chr1,chr1	-,+	YY1AP1,MSTO2P	-54712,1410
chr19:35222638-35223873	chr19	+	35222851	35223685	True	NM_001029997,NM_001007248,NM_001145665	chr19,chr19,chr19	+,-,+	ZNF181,ZNF599,ZNF181	1794,40499,1794
chr3:172822074-172823431	chr3	+	172822444	172823404	True	NM_014932,NM_031955	chr3,chr3	+,-	NLGN1,SPATA16	292839,35704
chr4:69086145-69087972	chr4	+	69086437	69087777	True	NR_015446,NM_001129907	chr4,chr4	+,-	FTLP10,TMPRSS11BNL	-38478,-2639
chr12:5263454-5265194	chr12	+	5263583	5264937	True	NM_006422,NM_002234	chr12,chr12	-,+	AKAP3,KCNA5	-509240,-110549
chr16:25231212-25232086	chr16	+	25231533	25232079	True	NM_001012981,NM_001169	chr16,chr16	-,+	ZKSCAN2,AQP8	36826,-3299
chr2:97510988-97511352	chr2	+	97511168	97511230	True	NM_144994,NM_199078	chr2,chr2	-,+	ANKRD23,CNNM3	-1410,-29228
chr3:50334894-50335598	chr3	+	50334943	50335609	True	NM_001200016,NM_001200029,NM_003549,NM_001200030,NM_001200031,NM_001200032,NM_012191,NM_001200018,NM_153285,NM_007312,NM_153282,NM_153215,NM_153283,NM_006764,NM_033159	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,-,-,-,-,-,-,-,+,-,-,-	NAT6,HYAL3,HYAL3,HYAL3,HYAL3,HYAL3,NAT6,NAT6,HYAL1,HYAL1,HYAL1,C3orf45,HYAL1,IFRD2,HYAL1	1293,734,1340,1340,1340,1340,1293,761,5445,5445,5445,-18476,5445,-4917,5445
chr12:113234231-113234575	chr12	+	113234358	113234552	True	NM_014954,NM_001143854,NM_001193521	chr12,chr12,chr12	+,+,-	RPH3A,RPH3A,RASAL1	-4867,-4867,339057
chr10:120967116-120967321	chr10	+	120967262	120967370	True	NM_005308,NM_014098	chr10,chr10	+,-	GRK5,PRDX3	-116,-28917
chr7:100881850-100882138	chr7	+	100881914	100882080	True	NM_014343,NM_006349,NM_016068,NM_001185080	chr7,chr7,chr7,chr7	-,+,-,-	CLDN15,ZNHIT1,FIS1,CLDN15	-687,-20980,6341,71
chr18:55105950-55106185	chr18	+	55106051	55106125	True	NM_000140,NM_004852	chr18,chr18	-,+	FECH,ONECUT2	147894,-3185
chr14:104027228-104028117	chr14	+	104027236	104028095	True	NM_032374,NM_001015049,NM_004873,NM_001015048	chr14,chr14,chr14,chr14	+,-,-,-	C14orf153,BAG5,BAG5,BAG5	1203,611,611,1107
chr2:160732145-160734008	chr2	+	160732472	160734055	True	NM_001198759,NM_022826	chr2,chr2	-,+	LY75-CD302,MARCH7	27269,-163513
chr14:55903654-55905394	chr14	+	55903654	55905367	True	NM_004986,NM_199047	chr14,chr14	+,-	KTN1,TBPL2	141557,1946
chr12:31901766-31902295	chr12	+	31901766	31902339	True	NR_004854,NM_001135863	chr12,chr12	-,+	AMN1,METTL20	-19658,-89211
chr10:13627252-13627803	chr10	+	13627306	13627685	True	NM_003675,NM_001100912	chr10,chr10	+,-	PRPF18,BEND7	1253,-82330
chr7:4167385-4167813	chr7	+	4167470	4167846	True	NM_020144,NR_027816	chr7,chr7	-,+	PAPOLB,SDK1	733829,1470
chr16:6071071-6071412	chr16	+	6071127	6071466	True	NM_018723,NM_001142333,NM_201598	chr16,chr16,chr16	+,+,-	RBFOX1,RBFOX1,FAM86A	-2049,-2049,-923338
chr3:36938205-36938512	chr3	+	36938489	36938543	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	48055,96297
chr15:41054709-41055027	chr15	+	41054708	41054992	True	NM_018145,NM_001130448,NM_005258	chr15,chr15,chr15	-,+,+	FAM82A2,C15orf62,GCHFR	-7250,7166,1292
chr3:137484107-137484357	chr3	+	137484208	137484352	True	NM_001170538,NM_004189	chr3,chr3	-,+	DZIP1L,SOX14	348020,-1125
chr5:140307688-140308057	chr5	+	140307692	140308100	True	NM_018898,NM_031882,NM_002109	chr5,chr5,chr5	+,+,-	PCDHAC1,PCDHAC1,HARS	-1441,-1441,-236721
chr21:40146918-40147898	chr21	+	40146923	40147739	True	NM_005239,NR_027066,NR_027065	chr21,chr21,chr21	+,-,-	ETS2,NCRNA00114,NCRNA00114	30109,-6025,-1522
chr19:21340099-21340624	chr19	+	21340129	21340302	True	NM_133473,NM_021269	chr19,chr19	+,-	ZNF431,ZNF708	-15351,171961
chr10:35535394-35536029	chr10	+	35535598	35536006	True	NM_001198777,NM_181698	chr10,chr10	-,+	CUL2,CCNY	-156028,-54
chr21:16319082-16320108	chr21	+	16319299	16320129	True	NM_003489,NR_003087	chr21,chr21	-,+	NRIP1,ABCC13	117047,-673230
chr3:169757011-169757378	chr3	+	169757056	169757186	True	NM_014373,NR_024409	chr3,chr3	+,-	GPR160,LOC100128164	-1372,-72534
chr16:1348022-1348557	chr16	+	1348075	1348437	True	NM_194261,NM_001001410	chr16,chr16	+,-	UBE2I,C16orf42	10742,53486
chr2:170624413-170624770	chr2	+	170624605	170624693	True	NM_003142,NM_014168	chr2,chr2	+,-	SSB,METTL5	30695,56710
chr6:149636410-149638067	chr6	+	149636746	149638007	True	NM_207360,NM_015093	chr6,chr6	-,+	ZC3H12D,TAB2	168191,1428
chr3:47555868-47556689	chr3	+	47555954	47556716	True	NM_015466,NM_001031703	chr3,chr3	+,-	PTPN23,C3orf75	-133514,-755
chr1:94688051-94689454	chr1	+	94688062	94689279	True	NM_004815,NM_001122674	chr1,chr1	-,+	ARHGAP29,ABCD3	14089,194653
chr3:23957965-23958326	chr3	+	23958032	23958342	True	NM_002948,NM_020345	chr3,chr3	+,-	RPL15,NKIRAS1	296,245
chr16:21163409-21163885	chr16	+	21163581	21163745	True	NM_020422,NM_017539	chr16,chr16	+,-	TMEM159,DNAH3	6166,7069
chr19:58917517-58919100	chr19	+	58917755	58918819	True	NM_138466,NM_173548	chr19,chr19	-,+	ZNF837,ZNF584	-25366,1243
chr10:98270746-98271532	chr10	+	98270851	98271526	True	NM_004088,NM_012465	chr10,chr10	+,-	DNTT,TLL2	-206817,2208
chr22:38380691-38381551	chr22	+	38380799	38381299	True	NM_006941,NM_021974	chr22,chr22	-,+	SOX10,POLR2F	-260,-31176
chr9:80645189-80645440	chr9	+	80645227	80645473	True	NM_001098802,NM_002072	chr9,chr9	+,-	CEP78,GNAQ	205517,796
chr3:41236814-41237194	chr3	+	41236925	41237243	True	NM_001098209,NM_001098210,NM_017886,NM_001904	chr3,chr3,chr3,chr3	+,+,-,+	CTNNB1,CTNNB1,ULK4,CTNNB1	3698,3698,766467,3698
chr2:231994816-231995330	chr2	+	231994895	231995154	True	NM_025139,NM_000867	chr2,chr2	+,-	ARMC9,HTR2B	68187,-5071
chr5:176924077-176924296	chr5	+	176924082	176924292	True	NM_213636,NM_001174102,NM_203352,NM_005451	chr5,chr5,chr5,chr5	-,+,-,-	PDLIM7,PRR7,PDLIM7,PDLIM7	360,-48807,360,360
chr11:102404323-102405212	chr11	+	102404941	102405203	True	NM_001166,NM_002423	chr11,chr11	+,-	BIRC2,MMP7	-187026,-3463
chr5:16509142-16509450	chr5	+	16509203	16509489	True	NM_019000,NM_006317	chr5,chr5	-,+	FAM134B,BASP1	-172,708260
chr14:62299449-62300101	chr14	+	62299450	62299897	True	NM_001017970,NM_003082	chr14,chr14	-,+	TMEM30B,SNAPC1	-550920,-70428
chr21:43134734-43135947	chr21	+	43135060	43135894	True	NR_027272,NR_024028	chr21,chr21	-,+	C21orf129,NCRNA00112	91,701
chr14:57965360-57965892	chr14	+	57965635	57965723	True	NM_018168,NM_001011713	chr14,chr14	-,+	C14orf105,NAA30	-5059,-108422
chr16:2387533-2388348	chr16	+	2387658	2388370	True	NR_003574,NM_001089	chr16,chr16	+,-	ABCA17P,ABCA3	2552,2427
chr16:74455625-74455883	chr16	+	74455636	74455867	True	NM_001011880,NM_002811	chr16,chr16	-,+	CLEC18B,PSMD7	-268,-125014
chr16:74455625-74455883	chr16	-	70207503	70207567	False	NR_033959,NM_173619	chr16,chr16	-,+	LOC729513,CLEC18C	52419,360
chr16:74455625-74455883	chr16	-	69984591	69984822	False	NM_001136214,NR_003610,NM_182619	chr16,chr16,chr16	+,-,+	CLEC18A,PDXDC2P,CLEC18A	-16,115079,-13
chr12:70764381-70764930	chr12	+	70764382	70764639	True	NM_002837,NM_014505	chr12,chr12	-,+	PTPRB,KCNMB4	239048,-4371
chr14:20098163-20099286	chr22	+	16365789	16366487	False	NR_001591,NM_001136213	chr22,chr22	+,-	psiTPTE22,POTEH	716313,-77852
chr14:20098163-20099286	chr14	+	20098203	20098901	True	NM_001145442,NM_172194	chr14,chr14	-,+	POTEM,OR4Q3	-77931,116685
chr14:20098163-20099286	chr14	-	19474835	19475459	False	NM_001145442,NM_001005356	chr14,chr14	-,+	POTEM,POTEG	544863,77905
chr5:112629441-112630071	chr5	+	112629629	112630093	True	NM_002387,NM_022828	chr5,chr5	-,+	MCC,YTHDC2	571,219297
chr16:27079916-27080237	chr16	+	27079921	27080217	True	NM_145080,NM_001145545	chr16,chr16	-,+	NSMCE1,C16orf82	199946,-1753
chr18:14944051-14944643	chr18	+	14944192	14944530	True	NR_027417,NR_036153	chr18,chr18	-,+	LOC644669,MIR3156-2	381438,-114078
chr1:33208009-33208955	chr1	+	33208208	33208982	True	NM_020888,NM_030786	chr1,chr1	+,-	KIAA1522,SYNC	-747,-39847
chr2:172971299-172971611	chr2	+	172971298	172971579	True	NM_178120,NM_004405	chr2,chr2	+,-	DLX1,DLX2	-21141,-3820
chr2:26914572-26915387	chr2	+	26914639	26915345	True	NM_002246,NM_001029881	chr2,chr2	+,-	KCNK3,CIB4	235,-50428
chr5:147243846-147244916	chr5	+	147243939	147244125	True	NM_054023,NM_003122	chr5,chr5	+,-	SCGB3A2,SPINK1	14148,-32679
chr1:207226287-207226602	chr1	+	207226292	207226640	True	NM_001018053,NM_018566,NM_006212	chr1,chr1,chr1	+,-,+	PFKFB2,YOD1,PFKFB2	-21,-1870,-21
chr8:23388864-23390114	chr8	+	23388987	23390071	True	NM_016612,NM_001128930	chr8,chr8	+,-	SLC25A37,ENTPD4	-2675,-73743
chr19:52228157-52228977	chr19	+	52228249	52228741	True	NM_001523,NR_024330	chr19,chr19	-,+	HAS1,NCRNA00085	-1028,-31716
chr1:32669629-32669844	chr1	+	32669658	32669858	True	NM_001160042,NM_018134,NM_001099434,NM_024296,NM_019118	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	IQCC,IQCC,DCDC2B,CCDC28B,TMEM234	1377,1377,4836,-3507,18118
chr22:21621141-21621723	chr22	+	21621148	21621770	True	NR_024583,NR_002829	chr22,chr22	+,-	POM121L8P,P2RX6P	14943,-222610
chr22:21621141-21621723	chr22	+	18820013	18820361	False	NM_005675,NR_003267	chr22,chr22	+,-	DGCR6,GGT3P	73374,-40539
chr22:21621141-21621723	chr22	-	21497507	21497855	False	NR_037566,NR_002829	chr22,chr22	+,-	BCRP2,P2RX6P	-40253,-98969
chr5:5150649-5152411	chr5	+	5150654	5152375	True	NM_139056,NR_028351	chr5,chr5	+,-	ADAMTS16,FLJ33360	-10263,1185080
chr7:83277762-83278064	chr7	+	83277767	83278103	True	NM_001178129,NM_012431,NM_000840	chr7,chr7,chr7	-,-,+	SEMA3E,SEMA3E,GRM3	-7020,426,2995126
chr10:71996110-71996608	chr10	+	71996218	71996562	True	NM_021129,NM_004096	chr10,chr10	-,+	PPA1,EIF4EBP2	-3028,167298
chr20:58508218-58508537	chr20	+	58508489	58508561	True	NM_022106,NM_001190827,NM_006242,NM_001190826,NM_014258	chr20,chr20,chr20,chr20,chr20	+,+,-,+,-	C20orf177,C20orf177,PPP1R3D,C20orf177,SYCP2	6882,6882,6841,257,-1280
chr10:92618014-92618599	chr10	+	92618115	92618644	True	NM_000872,NM_019860,NM_006413,NM_019859	chr10,chr10,chr10,chr10	-,-,+,-	HTR7,HTR7,RPP30,HTR7	-444,-444,13064,-444
chr12:133286453-133286886	chr12	+	133286644	133286916	True	NM_001170544,NM_001170543,NM_138575,NM_006231	chr12,chr12,chr12,chr12	+,+,+,-	PGAM5,PGAM5,PGAM5,POLE	476,476,476,-22699
chr1:1150485-1151247	chr1	+	1150528	1151244	True	NM_004195,NM_148901,NM_148902,NM_003327,NM_080605	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	TNFRSF18,TNFRSF18,TNFRSF18,TNFRSF4,B3GALT6	-8439,-8439,-8439,-980,16384
chr20:42967431-42968753	chr20	+	42967787	42968426	True	NM_178491,NM_001080472	chr20,chr20	+,-	R3HDML,FITM2	-2212,-27898
chr11:10324860-10325078	chr11	+	10324864	10325122	True	NM_030962,NM_001124	chr11,chr11	-,+	SBF2,ADM	-9110,1519
chrX:16738484-16738857	chrX	+	16738484	16738846	True	NM_032796,NM_019857,NM_175859,NR_033181,NM_001144002	chrX,chrX,chrX,chrX,chrX	+,-,-,+,-	SYAP1,CTPS2,CTPS2,SYAP1,CTPS2	-828,-7425,-7709,-828,-8144
chr22:31641237-31641878	chr22	+	31641236	31641827	True	NM_001031801,NM_001135911,NM_016733	chr22,chr22,chr22	+,-,+	LIMK2,PIK3IP1,LIMK2	2520,46744,2520
chr10:82215115-82215335	chr10	+	82215147	82215365	True	NM_001128309,NM_030927,NM_138812	chr10,chr10,chr10	+,+,-	TSPAN14,TSPAN14,DYDC1	-1160,-1160,-98647
chr5:75917033-75917675	chr5	+	75917050	75917689	True	NR_028375,NM_004101	chr5,chr5	+,-	NCRUPAR,F2RL2	90073,1604
chr11:2230146-2230349	chr11	+	2230163	2230339	True	NM_199293,NR_028044	chr11,chr11	-,+	TH,IGF2AS	-37128,-68456
chr6:136571763-136571976	chr6	+	136571769	136571987	True	NM_001099286,NM_018945,NM_138419	chr6,chr6,chr6	-,+,-	FAM54A,PDE7B,FAM54A	-320,-398986,-320
chr19:3499486-3500418	chr19	+	3499788	3500382	True	NM_031304,NM_016263,NM_001145165	chr19,chr19,chr19	-,+,-	DOHH,FZR1,DOHH	289,5912,606
chr11:47199412-47199981	chr11	+	47199435	47199979	True	NM_032389,NM_000107,NM_001184974,NM_001184975,NM_016223	chr11,chr11,chr11,chr11,chr11	-,+,-,-,-	ARFGAP2,DDB2,PACSIN3,PACSIN3,PACSIN3	-1016,36513,8081,7503,8081
chr17:34890858-34891059	chr17	+	34890944	34891102	True	NM_001163735,NM_024835,NM_178517,NM_001033580,NM_025109	chr17,chr17,chr17,chr17,chr17	-,+,+,-,-	MYO19,GGNBP2,PIGW,MYO19,MYO19	253,9634,300,253,253
chr11:46300912-46301829	chr11	+	46301019	46301669	True	NM_000741,NM_052854	chr11,chr11	-,+	CHRM4,CREB3L1	106488,-1842
chr2:85108401-85109352	chr2	+	85108467	85109251	True	NM_021103,NM_001080824	chr2,chr2	+,-	TMSB10,C2orf89	23511,-215
chr10:43966126-43966697	chr10	+	43966468	43966646	True	NR_026693,NM_001098204	chr10,chr10	+,-	ZNF487P,HNRNPF	-33948,-61772
chr1:203830955-203831258	chr1	+	203831070	203831274	True	NM_003094,NR_027902	chr1,chr1	+,-	SNRPE,C1orf157	-381,179168
chr6:46653339-46655261	chr6	+	46653787	46655303	True	NM_016593,NM_001010870,NM_001168359	chr6,chr6,chr6	-,+,+	CYP39A1,TDRD6,TDRD6	-33264,308,308
chr7:100080416-100080784	chr7	+	100080415	100080779	True	NM_173564,NM_030935	chr7,chr7	+,-	C7orf51,TSC22D4	770,-3513
chr5:132364367-132365691	chr5	+	132364412	132365578	True	NM_017665,NM_002154	chr5,chr5	-,+	ZCCHC10,HSPA4	-2172,22083
chr6:34520991-34521480	chr6	+	34521046	34521413	True	NM_001199583,NM_012391	chr6,chr6	+,-	PACSIN1,SPDEF	-38449,2729
chr6:15024839-15025102	chr6	+	15025060	15025118	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	221408,638221
chr1:85356707-85357616	chr1	+	85356775	85357534	True	NM_145172,NM_012152	chr1,chr1	+,-	WDR63,LPAR3	170458,1413
chr9:140352584-140352817	chr9	+	140352589	140352853	True	NM_001130971,NM_001130970,NM_006647,NM_001178064,NM_015537,NM_001130969	chr9,chr9,chr9,chr9,chr9,chr9	-,-,+,-,-,-	NELF,NELF,NOXA1,NELF,NELF,NELF	983,983,-34793,983,983,983
chr2:114515746-114517228	chr2	+	114515937	114516904	True	NM_005721,NM_013412,NM_025181	chr2,chr2,chr2	+,+,-	ACTR3,RABL2A,SLC35F5	130632,-131181,-1537
chr8:124287933-124288448	chr8	+	124288064	124288468	True	NR_037874,NR_037873,NM_001204180,NM_007222,NM_207006,NM_001017926	chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,+,-	ZHX1,ZHX1,ZHX1-C8ORF76,ZHX1,FAM83A,ZHX1	-1337,-283,-1337,-1337,-93363,-1337
chr18:75697924-75698906	chr18	+	75697940	75698862	True	NM_001480,NM_001025100	chr18,chr18	+,-	GALR1,MBP	-735991,-853166
chr13:96204419-96204667	chr13	+	96204434	96204706	True	NM_006984,NM_014934	chr13,chr13	+,-	CLDN10,DZIP1	240,92301
chr20:19191755-19192408	chr20	+	19191874	19192394	True	NR_024564,NM_020689	chr20,chr20	-,+	LOC100130264,SLC24A3	72896,895
chr4:22513375-22513610	chr4	+	22513374	22513440	True	NM_001128432,NM_145290	chr4,chr4	+,-	GBA3,GPR125	181107,4282
chr1:45236349-45237643	chr1	+	45236438	45237436	True	NR_001456,NR_001457,NM_153274,NR_000024,NR_000015,NM_001012	chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,+,+,+	SNORD38A,SNORD38B,BEST4,SNORD46,SNORD55,RPS8	6077,6625,16040,4727,4100,3809
chr3:51574505-51574912	chr3	+	51574504	51574663	True	NM_015106,NM_014703	chr3,chr3	+,-	RAD54L2,VPRBP	932,-40486
chr11:93413365-93414493	chr11	+	93413455	93414381	True	NM_033395,NR_003028	chr11,chr11	+,-	KIAA1731,SNORA25	-18690,49482
chr20:61048928-61049241	chr20	+	61048939	61049221	True	NM_001024,NM_080473	chr20,chr20	+,-	RPS21,GATA5	-86869,1855
chr2:54280351-54280708	chr2	+	54280356	54280636	True	NM_014614,NM_138448	chr2,chr2	-,+	PSME4,ACYP2	-82379,61773
chr10:38300079-38300367	chr10	+	38300082	38300233	True	NM_006974,NM_145011,NM_006954	chr10,chr10,chr10	+,-,+	ZNF33A,ZNF25,ZNF33A	-555,-34629,-555
chr8:12804803-12805454	chr8	+	12804816	12805350	True	NM_020844,NR_015383	chr8,chr8	+,-	KIAA1456,LOC340357	-1697,-135906
chr3:17783498-17783872	chr3	+	17783501	17783569	True	NM_014744,NM_001134380,NR_037465	chr3,chr3,chr3	-,-,+	TBC1D5,TBC1D5,MIR3714	-1102,721,-808866
chr5:133503373-133505275	chr5	+	133503836	133505256	True	NM_006930,NR_033449,NM_170679	chr5,chr5,chr5	-,+,-	SKP1,TCF7,SKP1	7527,-52544,7527
chr10:133794518-133795018	chr10	+	133794525	133794919	True	NM_004052,NR_033191	chr10,chr10	-,+	BNIP3,PPP2R2D	566,-46616
chr9:93400051-93401564	chr9	+	93400129	93401605	True	NM_017594,NM_001135052	chr9,chr9	-,+	DIRAS2,SYK	3562,162406
chr22:50688384-50688841	chr22	+	50688386	50688842	True	NM_032019,NM_031454,NM_020461,NM_001159286	chr22,chr22,chr22,chr22	-,+,-,-	HDAC10,SELO,TUBGCP6,HDAC10	1042,-49029,-4986,1042
chr22:41955592-41955901	chr22	+	41955697	41955929	True	NM_001018052,NM_014460	chr22,chr22	-,+	POLR3H,CSDC2	-15218,1084
chr1:202779135-202779701	chr1	+	202779287	202779747	True	NM_006618,NR_002929	chr1,chr1	-,+	KDM5B,LOC148709	-1738,51134
chr15:72489528-72489801	chr15	+	72489573	72489763	True	NM_001012642,NM_145204	chr15,chr15	-,+	GRAMD2,SENP8	423,-78993
chr1:148193709-148194236	chr7	-	55540149	55540689	False	NM_018697,NM_030796	chr7,chr7	+,-	LANCL2,VOPP1	-107059,99561
chr1:148193709-148194236	chr1	+	148193714	148194254	True	NM_001164262,NM_001170755,NM_001164261	chr1,chr1,chr1	-,+,-	PPIAL4F,NBPF15,PPIAL4D	8332,363933,8332
chr10:74711374-74713138	chr10	+	74711524	74713103	True	NM_152635,NM_032562	chr10,chr10	+,-	OIT3,PLA2G12B	-58236,1464
chr14:105333332-105333904	chr14	+	105333410	105333856	True	NM_015005,NM_001112726,NM_001014432	chr14,chr14,chr14	+,+,-	KIAA0284,KIAA0284,AKT1	-1811,-1811,-71330
chr22:38479863-38480071	chr22	+	38479878	38480016	True	NM_013356,NM_012407	chr22,chr22	-,+	SLC16A8,PICK1	-708,-26667
chr3:197783833-197785560	chr3	+	197783970	197785584	True	NR_003291,NM_001145248	chr3,chr3	-,+	LOC348840,FAM157A	22008,93652
chr3:101398410-101399123	chr6	+	42923686	42923736	True	NM_018960,NM_000287	chr6,chr6	+,-	GNMT,PEX6	4763,23295
chr4:174555523-174555841	chr4	+	174555522	174555583	True	NR_003679,NM_006792	chr4,chr4	+,-	NBLA00301,MORF4	-103964,-17728
chr9:37589344-37590420	chr9	+	37589343	37589899	True	NM_014907,NM_001001790,NM_001134485,NM_001134484	chr9,chr9,chr9,chr9	+,-,-,-	FRMPD1,TOMM5,TOMM5,TOMM5	61152,2801,2801,2801
chr12:54454372-54454726	chr12	+	54454509	54454671	True	NM_153633,NR_026655,NR_026658	chr12,chr12,chr12	+,+,-	HOXC4,FLJ12825,LOC100240735	-6899,-2522,20986
chr15:28772665-28773994	chr15	+	28772931	28773417	True	NR_036443,NR_033351,NR_033353	chr15,chr15,chr15	+,-,-	HERC2P9,GOLGA8F,GOLGA8G	126170,4776,4776
chr15:28772665-28773994	chr15	-	23604592	23604670	False	NR_002824,NR_033350	chr15,chr15	-,+	HERC2P2,GOLGA8E	-226333,-169573
chr15:28772665-28773994	chr15	-	28628509	28628587	False	NM_004667,NR_033351,NR_033353	chr15,chr15,chr15	-,+,+	HERC2,GOLGA8F,GOLGA8G	-61214,-4776,-4776
chr2:63825353-63825628	chr2	+	63825575	63825661	True	NM_015910,NM_001199111,NM_001199112,NM_005917	chr2,chr2,chr2,chr2	-,+,+,+	WDPCP,MDH1,MDH1,MDH1	-9708,-9348,-9348,-9890
chr16:72041561-72042027	chr16	+	72041659	72041791	True	NM_001361,NM_181536	chr16,chr16	+,-	DHODH,PKD1L3	851,-7782
chr2:23610116-23611241	chr2	+	23610170	23611260	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	538734,-1923
chr2:162921663-162922981	chr2	+	162921664	162923020	True	NM_001935,NM_012198	chr2,chr2	-,+	DPP4,GCA	8082,277562
chr2:162016951-162017189	chr2	+	162016970	162017080	True	NM_016836,NM_001199135	chr2,chr2	-,+	RBMS1,TANK	-666652,-82
chr4:165952867-165953108	chr4	+	165952954	165953154	True	NM_001012414,NM_152620	chr4,chr4	-,+	TRIM61,TRIM60	-54136,-4
chr17:4542978-4543236	chr17	+	4542996	4543270	True	NM_001140,NM_001114974	chr17,chr17	-,+	ALOX15,SMTNL2	1740,-55213
chr17:4542978-4543236	chr17	-	6560188	6560462	False	NM_016060,NM_001105520	chr17,chr17	-,+	MED31,C17orf100	-5234,-5180
chr9:159678-161188	chr9	+	160198	160266	True	NM_001145355,NM_203447	chr9,chr9	-,+	CBWD1,DOCK8	18859,54598
chr10:5930685-5931038	chr10	+	5930684	5931030	True	NM_019046,NM_001009941,NM_178150,NM_001009943,NM_032807	chr10,chr10,chr10,chr10,chr10	-,-,+,-,+	ANKRD16,ANKRD16,FBXO18,ANKRD16,FBXO18	880,880,1183,880,5318
chr14:74766484-74767714	chr14	+	74766854	74767569	True	NR_003256,NM_018228,NM_005050	chr14,chr14,chr14	-,+,-	ABCD4,VRTN,ABCD4	2255,47596,2255
chr2:128459886-128460491	chr2	+	128460000	128460544	True	NM_032740,NM_001161404	chr2,chr2	+,-	SFT2D3,LIMS2	-1455,-20640
chr22:43045956-43046205	chr22	+	43045957	43046033	True	NM_001171660,NM_001171661,NM_001129819,NM_000398,NM_007326,NR_029422,NM_001165877	chr22,chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,-,+,-	CYB5R3,CYB5R3,CYB5R3,CYB5R3,CYB5R3,RNU12,ATP5L2	-5317,-2962,-2962,-552,-2962,-34757,-9350
chr1:211997592-211998842	chr1	+	211997776	211998404	True	NM_016448,NM_014873	chr1,chr1	+,-	DTL,LPGAT1	210514,5762
chr5:140529701-140530107	chr5	+	140529700	140530098	True	NR_001280,NM_031947,NM_018939	chr5,chr5,chr5	+,-,+	PCDHB17,SLC25A2,PCDHB6	5481,153576,32
chr20:11904406-11906047	chr20	+	11904479	11905954	True	NM_000214,NM_014962	chr20,chr20	-,+	JAG1,BTBD3	-1249785,-5972
chr12:55720543-55722233	chr12	+	55720711	55722055	True	NM_001005493,NM_001005182,NM_054104	chr12,chr12,chr12	-,+,+	OR6C6,OR6C1,OR6C3	-31695,-6378,3429
chr11:74464172-74465720	chr11	+	74464364	74465511	True	NM_015424,NM_001098638	chr11,chr11	-,+	CHRDL2,RNF169	-22178,-4510
chr17:4546280-4546738	chr17	+	4546303	4546661	True	NM_001140,NM_001114974	chr17,chr17	-,+	ALOX15,SMTNL2	-1343,-58521
chr3:171756091-171757265	chr3	+	171756090	171757193	True	NM_001135095,NM_002662,NM_022763	chr3,chr3,chr3	+,-,+	FNDC3B,PLD1,FNDC3B	1150,-227817,224
chr16:88492985-88493658	chr16	+	88493198	88493700	True	NM_000101,NM_001127464	chr16,chr16	-,+	CYBA,ZNF469	223807,178
chr17:6617740-6618382	chr17	+	6617800	6618207	True	NM_177550,NM_001143838,NM_017523	chr17,chr17,chr17	-,-,+	SLC13A5,SLC13A5,XAF1	-1060,-1060,40948
chrX:24714862-24716617	chrX	+	24714931	24716536	True	NM_016937,NM_001163264	chrX,chrX	+,-	POLA1,PCYT1B	-2918,-23952
chr2:191041367-191042209	chr2	+	191041561	191042103	True	NM_001042519,NM_005259,NM_032321	chr2,chr2,chr2	+,-,+	C2orf88,MSTN,C2orf88	3485,-114106,3577
chr20:32077419-32077629	chr20	+	32077442	32077670	True	NM_001032999,NM_003098	chr20,chr20	+,-	CBFA2T2,SNTA1	257,-45744
chr15:99643269-99644426	chr15	+	99643283	99644149	True	NM_015286,NM_001167902,NM_145728	chr15,chr15,chr15	+,-,+	SYNM,PGPEP1L,SYNM	1136,-92259,1136
chr6:127439548-127439797	chr6	+	127439557	127439681	True	NM_032784,NM_001139510	chr6,chr6	+,-	RSPO3,ECHDC1	366,223921
chr15:41708941-41709180	chr15	+	41708940	41709138	True	NM_016013,NM_015138	chr15,chr15	-,+	NDUFAF1,RTF1	-14298,163
chr6:100053665-100053923	chr6	+	100053664	100053865	True	NM_005190,NM_021620	chr6,chr6	-,+	CCNC,PRDM13	-36974,784
chr6:41887743-41888367	chr6	+	41887803	41888321	True	NM_004275,NM_004053	chr6,chr6	-,+	MED20,BYSL	606,643
chrX:154764190-154765533	chrX	+	154764210	154765530	True	NM_080720,NR_036260	chrX,chrX	-,+	H2AFB3,MIR1184-3	-74614,-77083
chr16:30090185-30090802	chr16	+	30090190	30090851	True	NM_002720,NM_004608	chr16,chr16	+,-	PPP4C,TBX6	-2857,12404
chr19:51644601-51644866	chr19	+	51644690	51644836	True	NM_014385,NM_145232,NM_016543	chr19,chr19,chr19	+,-,+	SIGLEC7,CTU1,SIGLEC7	721,-33043,721
chr5:143199867-143201009	chr5	+	143200052	143200815	True	NM_021182,NM_001024947	chr5,chr5	+,-	HMHB1,YIPF5	-8380,349520
chr6:31870243-31870781	chr6_qbl_hap6	+	3164166	3164574	False	NM_025256,NM_001178063,NM_181842,NM_006709	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	-,+,-,-	EHMT2,C2,ZBTB12,EHMT2	-4911,-1650,-603,-4911
chr6:31870243-31870781	chr6_mcf_hap5	+	3250255	3250663	False	NM_025256,NM_001178063,NM_181842,NM_006709	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	-,+,-,-	EHMT2,C2,ZBTB12,EHMT2	-4911,-1648,-603,-4911
chr6:31870243-31870781	chr6_cox_hap2	+	3380126	3380534	False	NM_025256,NM_001178063,NM_181842,NM_006709	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	-,+,-,-	EHMT2,C2,ZBTB12,EHMT2	-4908,-1648,-603,-4908
chr6:31870243-31870781	chr6	+	31870372	31870780	True	NM_025256,NM_001178063,NM_181842,NM_006709	chr6,chr6,chr6,chr6	-,+,-,-	EHMT2,C2,ZBTB12,EHMT2	-4908,-1648,-603,-4908
chr6:31870243-31870781	chr6_dbb_hap3	+	3155954	3156362	False	NM_025256,NM_001178063,NM_181842,NM_006709	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	-,+,-,-	EHMT2,C2,ZBTB12,EHMT2	-4908,-1648,-603,-4908
chr8:101731512-101732973	chr8	+	101731548	101733012	True	NR_033962,NM_002568	chr8,chr8	+,-	FLJ42969,PABPC1	331269,1355
chr3:183893355-183894148	chr3	+	183893372	183894182	True	NM_005787,NM_001025205,NM_018358,NM_004068	chr3,chr3,chr3,chr3	-,+,+,+	ALG3,AP2M1,ABCF3,AP2M1	72627,-789,9680,-789
chr14:94488800-94490219	chr14	+	94488845	94490119	True	NM_023112,NM_001202429	chr14,chr14	+,-	OTUB2,ASB2	2604,-45769
chr17:80416862-80417089	chr17	+	80416954	80417068	True	NR_036519,NM_012336,NM_001038618,NM_001193657,NR_036516,NM_001193653,NM_031968,NM_001033046,NM_001100408,NR_036514,NR_036517,NM_001193654,NM_001083608,NR_036518,NM_001100407,NM_001193655	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,+,-,-,-,+,-,-,-,-,-,+,-,-,-	C17orf62,NARF,NARF,C17orf62,C17orf62,C17orf62,NARF,C17orf62,C17orf62,C17orf62,C17orf62,C17orf62,NARF,C17orf62,C17orf62,C17orf62	-8247,-465,-945,-8247,-8247,-8247,-465,-8247,-8247,-8247,-8247,-8247,-465,-8247,-8247,-9352
chr22:32341163-32341547	chr22	+	32341201	32341565	True	NM_015372,NM_003405	chr22,chr22	-,+	C22orf24,YWHAH	63,-773
chr8:125732216-125733741	chr8	+	125732215	125733496	True	NM_005005,NM_014751	chr8,chr8	+,-	NDUFB9,MTSS1	-180927,7285
chr5:162927573-162928565	chr5	+	162927758	162928345	True	NM_182796,NM_145266,NM_013283	chr5,chr5,chr5	+,-,+	MAT2B,NUDCD2,MAT2B	1885,-40615,4239
chr19:7850849-7851149	chr19	+	7850874	7851060	True	NR_026692,NR_002931	chr19,chr19	-,+	CD209,CLEC4GP1	-38410,1309
chr16:71918471-71919052	chr16	+	71918518	71919101	True	NM_014761,NM_017530,NM_001201554,NM_001201556,NM_001201552,NM_001201553	chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,-,-,-	KIAA0174,ZNF821,ZNF821,ZNF821,ZNF821,ZNF821	10344,-1074,-425,-425,-425,-1074
chr5:93076424-93076965	chr5	+	93076452	93076942	True	NM_005654,NM_153216	chr5,chr5	+,-	NR2F1,POU5F2	-157460,417
chr16:68572345-68572953	chr16	+	68572678	68572920	True	NM_133458,NM_018667	chr16,chr16	+,-	ZFP90,SMPD3	740,-90269
chr12:105477684-105477932	chr12	+	105477703	105477919	True	NR_027752,NM_001034173,NM_015275	chr12,chr12,chr12	-,-,+	ALDH1L2,ALDH1L2,KIAA1033	472,472,23572
chr8:7813043-7813373	chr8	+	7813242	7813414	True	NR_003668,NR_027424	chr8,chr8	-,+	DEFB109P1B,FAM66E	41679,-774
chr8:7813043-7813373	chr8	-	7211998	7212048	False	NR_027423,NM_001164457,NR_003668	chr8,chr8,chr8	-,-,+	FAM66B,ZNF705G,DEFB109P1B	878,8492,-41681
chr8:7813043-7813373	chr8	+	11974118	11974168	False	NR_003275,NR_027425	chr8,chr8	-,+	LOC392196,FAM66D	12686,-878
chr11:8680037-8680331	chr11	+	8680039	8680299	True	NM_000990,NM_014818	chr11,chr11	+,-	RPL27A,TRIM66	23695,134
chr8:66934421-66934678	chr8	+	66934443	66934727	True	NM_000756,NM_033105	chr8,chr8	-,+	CRH,DNAJC5B	156169,-703
chr6:88856118-88856731	chr6	+	88856251	88856720	True	NM_033181,NM_030960,NM_001160260	chr6,chr6,chr6	-,+,-	CNR1,SPACA1,CNR1	-1195,-98801,4213
chr10:99497074-99498264	chr10	+	99497459	99498213	True	NM_001002261,NM_001002262,NM_001174119,NM_001174120,NM_001174121,NM_001174122,NM_144588,NR_026754	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,+,+,-	ZFYVE27,ZFYVE27,ZFYVE27,ZFYVE27,ZFYVE27,ZFYVE27,ZFYVE27,LOC100270710	20,-632,-632,-632,-632,-632,-632,-19557
chr11:34534540-34534810	chr11	+	34534611	34534683	True	NM_001422,NM_001752,NM_198381	chr11,chr11,chr11	-,+,-	ELF5,CAT,ELF5	697,-74190,-1265
chr1:19641743-19642000	chr1	+	19641745	19641991	True	NM_003689,NM_001040125,NM_001040126,NM_017765	chr1,chr1,chr1,chr1	-,+,+,+	AKR7A2,PQLC2,PQLC2,PQLC2	-3105,-3056,-3056,-3056
chr5:76007949-76008285	chr5	+	76008010	76008254	True	NR_028375,NM_001992,NM_004101	chr5,chr5,chr5	+,+,-	NCRUPAR,F2R,F2RL2	-304,3613,-88770
chr1:55446870-55447145	chr1	+	55446946	55447006	True	NM_014762,NM_182532	chr1,chr1	-,+	DHCR24,TMEM61	-94025,-535
chr6:41755557-41755973	chr6	+	41755563	41755873	True	NM_001134493,NM_013397,NM_006653	chr6,chr6,chr6	+,+,-	TOMM6,PRICKLE4,FRS3	-433,-7114,-7933
chr15:75867607-75868795	chr15	+	75867626	75867945	True	NM_153271,NM_002833	chr15,chr15	+,-	SNX33,PTPN9	73402,3738
chr16:49862704-49863037	chr16	+	49862831	49863086	True	NM_153261,NM_015069	chr16,chr16	+,-	TMEM188,ZNF423	196102,-1913
chr11:13485426-13486993	chr11	+	13485532	13486878	True	NM_001178,NM_032320	chr11,chr11	+,-	ARNTL,BTBD10	-186259,-694
chr8:128745761-128746069	chr8	+	128746044	128746121	True	NM_002467,NR_024393	chr8,chr8	+,-	MYC,LOC727677	2193,-251660
chr4:7756507-7756943	chr4	+	7756560	7756772	True	NM_001134647,NR_026892	chr4,chr4	-,+	AFAP1,AFAP1-AS1	184931,-794
chrX:123095322-123096033	chrX	+	123095436	123096077	True	NM_001042751,NM_001042750,NM_006603,NM_001081550,NM_001042749	chrX,chrX,chrX,chrX,chrX	+,+,+,-,+	STAG2,STAG2,STAG2,THOC2,STAG2	69,69,69,-228532,-1012
chr19:40933481-40934164	chr19	+	40934013	40934111	True	NM_020971,NM_013376	chr19,chr19	+,-	SPTBN4,SERTAD1	39014,-2081
chr16:23161309-23163103	chr16	+	23161431	23163152	True	NM_001039,NM_020718	chr16,chr16	+,-	SCNN1G,USP31	30887,-840
chr20:44749558-44751031	chr20	+	44749780	44751072	True	NM_152854,NM_001250,NM_020967	chr20,chr20,chr20	+,+,-	CD40,CD40,NCOA5	-2925,-2925,-31200
chr10:126492392-126493576	chr10	+	126492479	126493043	True	NM_032182,NM_212554	chr10,chr10	+,-	FAM175B,METTL10	-2181,-12040
chr6:27181316-27182057	chr6	+	27181608	27181943	True	NM_005865,NM_080593	chr6,chr6	+,-	PRSS16,HIST1H2BK	33558,-66971
chr5:95290437-95291577	chr5	+	95290577	95291443	True	NR_026936,NM_012081	chr5,chr5	+,-	C5orf27,ELL2	-102700,6382
chr8:22530683-22531154	chr8	+	22530696	22531149	True	NM_018688,NM_021174	chr8,chr8	-,+	BIN3,KIAA1967	-4035,-68208
chr1:113997289-113998663	chr1	+	113997602	113998545	True	NM_152900,NM_006608	chr1,chr1	+,-	MAGI3,PHTF1	-64186,303295
chr22:17604532-17604741	chr22	+	17604531	17604683	True	NM_031890,NM_001163079,NR_024482	chr22,chr22,chr22	-,-,+	CECR6,CECR6,CECR4	-2318,-2274,35595
chr5:122756987-122758241	chr5	+	122757090	122758276	True	NM_001031812,NM_153223,NM_001166226	chr5,chr5,chr5	+,-,-	CSNK1G3,CEP120,CEP120	89516,1060,1060
chr17:63052421-63052661	chr17	+	63052471	63052653	True	NM_006572,NM_001165933	chr17,chr17	-,+	GNA13,RGS9	317,80802
chr6:11779076-11779838	chr6	+	11779135	11779688	True	NM_001143948,NM_032744,NM_002114	chr6,chr6,chr6	-,-,+	C6orf105,C6orf105,HIVEP1	25,25,233035
chr17:45971136-45971772	chr17	+	45971136	45971495	True	NM_003110,NM_199262	chr17,chr17	+,-	SP2,SP6	2020,-37896
chr2:32236096-32236316	chr2	+	32236213	32236341	True	NM_015955,NM_014946,NM_001137602	chr2,chr2,chr2	-,+,-	MEMO1,SPAST,MEMO1	-515,52338,-515
chr17:1944580-1944891	chr17	+	1944584	1944846	True	NR_029674,NR_029625,NM_080822	chr17,chr17,chr17	-,-,+	MIR132,MIR212,OVCA2	8506,8878,430
chr4:170186783-170187859	chr4	+	170187104	170187708	True	NM_020870,NM_001829	chr4,chr4	-,+	SH3RF1,CLCN3	4601,354013
chr1:25754790-25755008	chr1	+	25754842	25755056	True	NM_020485,NM_018202,NM_138616,NM_138617,NM_138618	chr1,chr1,chr1,chr1,chr1	-,+,-,-,-	RHCE,TMEM57,RHCE,RHCE,RHCE	-7479,2331,-7479,-7479,-7479
chr11:112039568-112041208	chr11	+	112039665	112041174	True	NM_001562,NM_031938,NM_001037290,NM_031275	chr11,chr11,chr11,chr11	-,+,+,+	IL18,BCO2,BCO2,TEX12	-4825,5033,5914,-1621
chr1:154193021-154193235	chr1	+	154193110	154193282	True	NM_001098616,NM_015449,NM_138740,NM_001127320,NM_014847	chr1,chr1,chr1,chr1,chr1	-,-,-,+,+	C1orf43,C1orf43,C1orf43,UBAP2L,UBAP2L	41,41,41,-506,42
chr5:176874346-176874588	chr5	+	176874394	176874624	True	NM_030567,NM_001174102,NM_080881,NM_001174101	chr5,chr5,chr5,chr5	+,+,-,+	PRR7,PRR7,DBN1,PRR7	-649,701,25297,-649
chr2:240969148-240969431	chr2	+	240969162	240969364	True	NM_001005853,NR_037808,NM_004544	chr2,chr2,chr2	-,+,-	OR6B2,LOC150935,NDUFA10	532,-284659,-4343
chr2:240969148-240969431	chr2	+	240984957	240985007	False	NR_037808,NM_173351,NM_001080835	chr2,chr2,chr2	+,-,-	LOC150935,OR6B3,PRR21	-300454,532,-2558
chr5:177433951-177434356	chr5	+	177434029	177434353	True	NM_006261,NM_001079527	chr5,chr5	-,+	PROP1,FAM153C	-10786,1335
chr5:177433951-177434356	chr5	+	175488314	175488372	False	NM_032361,NM_001079529	chr5,chr5	-,+	THOC3,FAM153B	-92769,23536
chr5:177433951-177434356	chr5	-	177209717	177209775	False	NR_003615,NM_173663	chr5,chr5	+,-	LOC728554,FAM153A	92486,-2212
chr17:42786724-42787261	chr17	+	42786724	42787232	True	NM_145663,NM_144609,NM_025104,NR_036623	chr17,chr17,chr17,chr17	+,-,+,+	DBF4B,CCDC43,DBF4B,DBF4B	-799,-19559,-799,-799
chr20:61848677-61849461	chr20	+	61848833	61849493	True	NM_022161,NM_017798	chr20,chr20	+,-	BIRC7,YTHDF1	17782,-1295
chr19:41429431-41430799	chr19	+	41429774	41430794	True	NM_030589,NR_001278	chr19,chr19	-,+	CYP2A7,CYP2B7P1	-41117,27
chr2:233795120-233797083	chr2	+	233795642	233796836	True	NM_001114090,NM_206895	chr2,chr2	-,+	NGEF,C2orf82	-2781,-60699
chr19:40949808-40950024	chr19	+	40949812	40949934	True	NM_013368,NM_020971,NM_203344	chr19,chr19,chr19	-,+,-	SERTAD3,SPTBN4,SERTAD3	-1307,23191,398
chr3:155417767-155418972	chr3	+	155417766	155419014	True	NM_003875,NM_014996	chr3,chr3	+,-	GMPS,PLCH1	169310,3038
chr1:21501748-21502032	chr1	+	21501772	21502054	True	NM_001198801,NM_001198803,NM_001198802,NM_032264	chr1,chr1,chr1,chr1	-,-,-,+	EIF4G3,EIF4G3,EIF4G3,NBPF3	1377,-521,1377,264576
chr19:44952430-44952670	chr19	+	44952506	44952700	True	NM_001205280,NM_014518	chr19,chr19	+,-	LOC147710,ZNF229	164239,15
chr6:167411430-167411668	chr6	+	167411431	167411519	True	NR_037504,NM_194429,NM_007045	chr6,chr6,chr6	-,+,+	MIR3939,FGFR1OP,FGFR1OP	-31,1296,1296
chr18:39534864-39535123	chr18	+	39534908	39535058	True	NM_002647,NR_002838	chr18,chr18	+,-	PIK3C3,KC6	140,-434347
chrX:70585765-70586015	chrX	+	70585770	70585998	True	NM_001171162,NM_138923,NM_004606	chrX,chrX,chrX	-,+,+	ZMYM3,TAF1,TAF1	-110723,115,115
chr15:57025150-57025440	chr15	+	57025242	57025320	True	NM_001002844,NM_017661,NM_001002843,NM_003205	chr15,chr15,chr15,chr15	-,-,-,+	ZNF280D,ZNF280D,ZNF280D,TCF12	517,517,517,185512
chr1:40135511-40135893	chr1	+	40135674	40135922	True	NM_203456,NM_032526	chr1,chr1	+,-	PPIE,NT5C1A	68594,1838
chr21:27598572-27600533	chr21	+	27599256	27600204	True	NM_002040,NM_001136131	chr21,chr21	+,-	GABPA,APP	-491978,-55810
chr18:67868766-67870529	chr18	+	67868868	67870161	True	NM_173630,NM_004232	chr18,chr18	-,+	RTTN,SOCS6	2851,85975
chr14:24506251-24506508	chr14	+	24506265	24506489	True	NM_006177,NM_001082488	chr14,chr14	-,+	NRL,DHRS4L1	47395,-606
chr2:97478932-97479850	chr2	+	97478968	97479748	True	NM_017623,NM_144994,NM_199078	chr2,chr2,chr2	+,-,+	CNNM3,ANKRD23,CNNM3	2242,30072,2242
chr8:33423530-33423819	chr8	+	33423664	33423848	True	NM_024787,NM_032509	chr8,chr8	-,+	RNF122,MAK16	845,-81030
chr17:48424264-48424624	chr17	+	48424282	48424664	True	NM_016504,NM_022167	chr17,chr17	-,+	MRPL27,XYLT2	25948,-940
chr12:46790247-46791749	chr12	+	46790472	46791609	True	NM_152641,NM_018976	chr12,chr12	+,-	ARID2,SLC38A2	-666912,-23827
chr15:90042609-90042937	chr15	+	90042745	90042942	True	NM_016321,NM_152259	chr15,chr15	-,+	RHCG,C15orf42	-2946,75875
chr21:34537922-34538439	chr21	+	34537946	34538144	True	NR_024102,NM_000874	chr21,chr21	-,+	C21orf54,IFNAR2	4447,64086
chr9:91264065-91265589	chr9	+	91264232	91265380	True	NM_145283,NM_001100111	chr9,chr9	+,-	NXNL2,LOC286238	-114274,1752
chr11:73890130-73890579	chr11	+	73890129	73890614	True	NM_015531,NM_016147	chr11,chr11	-,+	C2CD3,PPME1	-8065,-7816
chr10:128997960-128998424	chr10	+	128997997	128998369	True	NM_001030013,NM_001039762	chr10,chr10	+,-	NPS,FAM196A	349243,-3575
chr20:4803033-4803265	chr20	+	4803053	4803269	True	NM_012409,NM_170774,NM_014737	chr20,chr20,chr20	+,-,-	PRND,RASSF2,RASSF2	-100548,-7284,1072
chr17:72676813-72678763	chr17	+	72676925	72678689	True	NM_175738,NM_139018	chr17,chr17	+,-	RAB37,CD300LF	-9720,30469
chr4:123811063-123812354	chr4	+	123811131	123812170	True	NM_007083,NM_145207	chr4,chr4	-,+	NUDT6,SPATA5	31646,32054
chr10:31990709-31992016	chr10	+	31990792	31991772	True	NM_001174094,NM_018287	chr10,chr10	+,-	ZEB1,ARHGAP12	-380779,226048
chr8:53476327-53476723	chr8	+	53476492	53476658	True	NM_207413,NM_005285	chr8,chr8	-,+	FAM150A,NPBWR1	1413,375809
chrX:70986113-70986666	chrX	+	70986401	70986559	True	NR_001568,NM_001145140,NM_001145139	chrX,chrX,chrX	-,+,+	BCYRN1,CXorf49,CXorf49B	-37439,-3312,-3312
chrX:70986113-70986666	chrX	-	70934715	70934873	False	NR_034005,NM_001145140,NM_001145139	chrX,chrX,chrX	+,-,-	FLJ46446,CXorf49,CXorf49B	-17720,3312,3312
chr1:113251267-113252839	chr1	+	113251304	113252706	True	NM_001042678,NM_001042679,NM_005167,NM_001004440,NM_175744	chr1,chr1,chr1,chr1,chr1	-,-,-,+,-	RHOC,RHOC,PPM1J,FAM19A3,RHOC	-1279,-1626,5294,10482,-1279
chr20:15192739-15194656	chr20	+	15193169	15194280	True	NR_037841,NM_001033087	chr20,chr20	-,+	NCRNA00186,MACROD2	-283008,-15716
chr17:7481428-7482004	chr17	+	7481427	7481984	True	NM_001416,NM_004870,NR_002918,NM_001040059,NR_002912,NR_024603,NR_002604,NM_001251,NM_001204510,NM_006942	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,+,+,+,+,-	EIF4A1,MPDU1,SNORA48,CD68,SNORA67,MPDU1,SNORD10,CD68,EIF4A1,SOX15	-5454,4980,-3447,821,-205,4980,-1349,820,-5454,11555
chr9:34640390-34641250	chr9	+	34640525	34640595	True	NM_147157,NM_005866,NM_000155	chr9,chr9,chr9	-,-,+	SIGMAR1,SIGMAR1,GALT	-2757,-2757,6039
chr2:211450848-211452043	chr2	+	211450882	211452054	True	NM_001136575,NM_001122634	chr2,chr2	-,+	LANCL1,CPS1	-109383,6024
chr11:133933792-133934107	chr11	+	133933792	133934128	True	NM_014987,NM_032801	chr11,chr11	-,+	IGSF9B,JAM3	-106912,4691
chr1:156782188-156783260	chr1	+	156782329	156783203	True	NM_003975,NM_001007792,NM_001161441,NM_001161443,NM_001161442,NM_001161444	chr1,chr1,chr1,chr1,chr1,chr1	-,+,-,-,-,-	SH2D2A,NTRK1,SH2D2A,SH2D2A,SH2D2A,SH2D2A	3487,2338,3487,2786,3487,3487
chr19:55796824-55797068	chr19	+	55796997	55797099	True	NM_012267,NM_032430,NM_001130106	chr19,chr19,chr19	-,+,-	HSPBP1,BRSK1,HSPBP1	-5246,-1514,-5246
chr3:15634879-15635395	chr3	+	15635042	15635282	True	NM_000060,NM_012260	chr3,chr3	+,-	BTD,HACL1	7972,7910
chr13:115041913-115042307	chr13	+	115041931	115042305	True	NM_080687,NM_007368,NM_023011	chr13,chr13,chr13	+,-,+	UPF3A,RASA3,UPF3A	4753,-143836,4753
chr2:168681044-168681716	chr2	+	168681251	168681506	True	NM_020981,NM_013233	chr2,chr2	+,-	B3GALT1,STK39	-6120,422662
chr11:59625686-59626243	chr11	+	59625686	59626144	True	NM_001062,NM_004177	chr11,chr11	-,+	TCN1,STX3	7953,-103205
chr20:3445484-3447176	chr20	+	3445658	3447219	True	NM_139321,NM_001009984,NM_139322	chr20,chr20,chr20	+,-,+	ATRN,C20orf194,ATRN	4445,-57403,4445
chr15:79381027-79381745	chr15	+	79381247	79381701	True	NM_001145648,NR_029705,NM_002891	chr15,chr15,chr15	-,+,-	RASGRF1,MIR184,RASGRF1	1564,120428,1564
chr15:64330227-64330632	chr15	+	64330231	64330549	True	NM_003099,NM_014326	chr15,chr15	+,-	SNX1,DAPK2	57627,8022
chr12:110906941-110907209	chr12	+	110907012	110907180	True	NM_013300,NM_016301,NM_001164372,NM_001164373	chr12,chr12,chr12,chr12	+,-,-,-	C12orf24,GPN3,GPN3,GPN3	-831,-923,-486,-923
chr12:117174225-117174871	chr12	+	117174260	117174886	True	NM_001109903,NM_032814,NM_024738	chr12,chr12,chr12	+,+,-	RNFT2,RNFT2,C12orf49	1209,1209,1007
chr19:53716985-53717494	chr19	+	53717279	53717346	True	NM_024733,NM_173856	chr19,chr19	-,+	ZNF665,VN1R2	-20660,44198
chr4:3463744-3464377	chr4	+	3463919	3464243	True	NM_001164673,NM_002337,NM_173660	chr4,chr4,chr4	+,-,+	DOK7,LRPAP1,DOK7	789,70031,789
chr19:40920664-40920933	chr19	+	40920663	40920825	True	NM_181882,NM_020971,NM_020956	chr19,chr19,chr19	-,+,-	PRX,SPTBN4,PRX	-1392,52300,-1392
chr19:35821915-35822247	chr19	+	35822161	35822247	True	NM_152481,NM_001771,NM_001185099,NM_001185100,NM_001185101	chr19,chr19,chr19,chr19,chr19	-,+,+,+,+	FAM187B,CD22,CD22,CD22,CD22	-102533,-2147,-2147,-2147,-2147
chr9:32526415-32528245	chr9	+	32526474	32527407	True	NM_014314,NR_033991	chr9,chr9	-,+	DDX58,LOC100129250	-152,23734
chr6:2243337-2243681	chr6	+	2243362	2243640	True	NM_001500,NM_020135	chr6,chr6	-,+	GMDS,WRNIP1	2256,522025
chr21:36422006-36422676	chr21	+	36422006	36422681	True	NR_024351,NM_001754	chr21,chr21	+,-	NCRNA00160,RUNX1	-325957,-411
chr14:101124002-101124718	chr14	+	101124197	101124617	True	NR_024096,NM_020836	chr14,chr14	+,-	C14orf70,BEGAIN	-643,-88066
chr6:27799424-27800263	chr6	+	27799478	27800095	True	NM_021968,NM_003510,NM_003520,NM_003541	chr6,chr6,chr6,chr6	+,-,+,-	HIST1H4J,HIST1H2AK,HIST1H2BN,HIST1H4K	-7633,6075,6344,-173
chr6:24863474-24864249	chr6	+	24863490	24863981	True	NM_015864,NM_015895	chr6,chr6	-,+	FAM65B,GMNN	13665,-88377
chr10:70166408-70166644	chr10	+	70166485	70166601	True	NM_001042417,NM_021644,NM_017987	chr10,chr10,chr10	-,+,-	RUFY2,HNRNPH3,RUFY2	500,-74768,395
chr5:137615086-137615549	chr5	+	137615357	137615449	True	NM_001496,NM_001135647	chr5,chr5	-,+	GFRA3,FAM53C	-5104,57774
chr17:61556242-61556645	chr17	+	61556251	61556663	True	NM_152830,NM_001915,NM_000789,NM_001178057	chr17,chr17,chr17,chr17	+,-,+,+	ACE,CYB561,ACE,ACE	5514,-32529,-1880,5514
chr10:95375432-95375651	chr10	+	95375478	95375648	True	NM_006744,NM_006204	chr10,chr10	-,+	RBP4,PDE6C	-14485,-3185
chr10:98346048-98346260	chr10	+	98346047	98346115	True	NM_020123,NM_001170765	chr10,chr10	-,+	TM9SF3,LCOR	744,245901
chr17:35715697-35715907	chr17	+	35715795	35715855	True	NM_198836,NM_173625	chr17,chr17	-,+	ACACA,C17orf78	254,17129
chr2:27806424-27806699	chr2	+	27806458	27806726	True	NM_032266,NM_001142683,NM_032434	chr2,chr2,chr2	+,-,+	C2orf16,CCDC121,ZNF512	-7120,45069,-616
chr12:29904763-29906350	chr12	+	29904832	29906119	True	NM_018099,NM_001193451	chr12,chr12	+,-	FAR2,TMTC1	-528286,30687
chr8:63895551-63895821	chr8	+	63895576	63895860	True	NR_027378,NM_003878	chr8,chr8	+,-	LOC643763,GGH	-5207,55800
chr12:50004427-50005363	chr12	+	50004625	50005311	True	NM_012272,NR_027450,NM_032130	chr12,chr12,chr12	+,-,-	PRPF40B,FAM186B,FAM186B	12091,-5215,-5192
chrX:129406033-129406857	chrX	+	129406071	129406337	True	NM_017666,NM_003951	chrX,chrX	-,+	ZNF280C,SLC25A14	-3149,67709
chr5:135229223-135230134	chr5	+	135229397	135230161	True	NM_000590,NM_012159	chr5,chr5	-,+	IL9,FBXL21	1405,35844
chr22:43506101-43506639	chr22	+	43506199	43506627	True	NM_001197,NR_027779	chr22,chr22	+,-	BIK,TTLL1	129,-20765
chr19:58982824-58983271	chr19	+	58982931	58983279	True	NM_017908,NM_003433,NM_014347	chr19,chr19,chr19	+,-,+	ZNF446,ZNF132,ZNF324	4515,-31342,-4570
chr19:58982824-58983271	chr19	+	58967383	58967495	False	NM_207395,NM_003433	chr19,chr19	+,-	ZNF324B,ZNF132	-4463,-15794
chr9:139926160-139927056	chr9	+	139926441	139927077	True	NM_004479,NM_001606,NM_212533,NM_207511	chr9,chr9,chr9,chr9	-,-,-,+	FUT7,ABCA2,ABCA2,C9orf139	265,-3701,-3067,-4576
chr5:179222066-179222647	chr5	+	179222105	179222688	True	NM_054013,NR_031598,NM_145867	chr5,chr5,chr5	-,-,+	MGAT4B,MIR1229,LTC4S	7237,2708,-1170
chr11:10774245-10775407	chr11	+	10774379	10775181	True	NM_014633,NR_004403	chr11,chr11	+,-	CTR9,SNORD97	-1634,48024
chr7:99217534-99217992	chr7	+	99217631	99218035	True	NM_145115,NM_000777	chr7,chr7	+,-	ZNF498,CYP3A5	-3111,59636
chr21:40179998-40181029	chr21	+	40180224	40180864	True	NR_027065,NM_005239	chr21,chr21	-,+	NCRNA00114,ETS2	-34823,-2433
chrX:19361006-19361318	chrX	+	19361010	19361237	True	NM_001173455,NM_001173454,NM_001173456,NM_000284,NM_001001671	chrX,chrX,chrX,chrX,chrX	+,+,+,+,-	PDHA1,PDHA1,PDHA1,PDHA1,MAP3K15	773,773,773,773,172199
chr11:129870231-129870924	chr11	+	129870299	129870732	True	NM_199437,NR_024233,NM_020228	chr11,chr11,chr11	-,+,-	PRDM10,NCRNA00167,PRDM10	2049,1786,2049
chr1:6478985-6479251	chr1	+	6479159	6479235	True	NM_019089,NM_031475	chr1,chr1	-,+	HES2,ESPN	794,5612
chr22:38610285-38610503	chr22	+	38610311	38610549	True	NM_001161573,NM_001199562	chr22,chr22	+,-	MAFF,PLA2G6	-11335,-32475
chr8:135712120-135712512	chr8	+	135712251	135712525	True	NM_001167583,NM_001029939,NR_002438,NM_001174158	chr8,chr8,chr8,chr8	-,-,+,-	ZFAT,ZFAT,ZFAT-AS1,ZFAT	-3450,-3450,-101988,-3450
chr1:33723285-33723759	chr1	+	33723343	33723805	True	NR_037400,NM_152493	chr1,chr1	-,+	MIR3605,ZNF362	74338,-1220
chr3:9959101-9959647	chr3	+	9959122	9959580	True	NR_037807,NM_032732,NM_207351,NM_153460,NM_153461,NM_001203263,NM_001203264,NM_001203265	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,-,+,+,+,+,+	IL17RC,IL17RC,PRRT3,IL17RC,IL17RC,IL17RC,IL17RC,IL17RC	-415,-415,34548,-415,-391,-415,-415,-415
chr20:32900074-32900931	chr20	+	32900255	32900965	True	NM_031483,NM_001161766,NM_000687	chr20,chr20,chr20	+,-,-	ITCH,AHCY,AHCY	50096,-647,-9040
chr7:88499748-88501136	chr7	+	88499778	88501001	True	NM_152706,NM_181646	chr7,chr7	-,+	C7orf62,ZNF804B	-74747,-111083
chr6:95264568-95265540	chr6	+	95264617	95264921	True	NM_024641,NM_004440	chr6,chr6	+,-	MANEA,EPHA7	760491,-1135317
chr7:55089777-55090145	chr7	+	55089814	55090174	True	NM_201284,NM_005228,NM_014302,NM_201282,NM_201283	chr7,chr7,chr7,chr7,chr7	+,+,-,+,+	EGFR,EGFR,SEC61G,EGFR,EGFR	-3140,-3140,-262875,-3140,-3140
chr16:66729315-66729636	chr16	+	66729361	66729683	True	NR_037619,NM_178818,NM_181521	chr16,chr16,chr16	+,-,-	CMTM3,CMTM4,CMTM4	-90778,977,977
chr2:121104980-121105211	chr2	+	121105063	121105141	True	NM_002193,NR_027181	chr2,chr2	+,-	INHBB,LOC84931	-1395,118834
chr9:102878476-102879234	chr9	+	102878678	102879155	True	NM_015051,NM_183245	chr9,chr9	-,+	ERP44,INVS	-17348,-17224
chr17:59667733-59668534	chr17	+	59667985	59668569	True	NM_199290,NM_018488	chr17,chr17	-,+	NACA2,TBX4	44,-134235
chr4:41263366-41264430	chr4	+	41263403	41264081	True	NM_173075,NM_004181	chr4,chr4	-,+	APBB2,UCHL1	-46768,-4565
chr22:40440723-40440986	chr22	+	40440905	40441011	True	NM_001024843,NM_152512	chr22,chr22	+,-	TNRC6B,ENTHD1	-135,-151111
chr5:6446412-6446624	chr5	+	6446558	6446670	True	NM_001145161,NM_032286	chr5,chr5	+,-	UBE2QL1,MED10	2065,-67919
chr12:132432148-132433633	chr12	+	132432300	132433369	True	NM_015409,NM_175066	chr12,chr12	+,-	EP400,DDX51	1138,195563
chr19:49141205-49141668	chr19	+	49141248	49141632	True	NM_001217,NM_001352,NR_004401	chr19,chr19,chr19	-,-,+	CA11,DBP,SEC1	7869,-609,-5
chrX:79828720-79828987	chrX	+	79828779	79829003	True	NM_152630,NM_153252	chrX,chrX	+,-	FAM46D,BRWD3	-152884,236280
chr1:236847707-236848110	chr1	+	236847800	236847952	True	NM_018072,NM_001103	chr1,chr1	-,+	HEATR1,ACTN2	-79959,1817
chr5:150022731-150023388	chr5	+	150022753	150023030	True	NM_018047,NM_007286,NM_001109974	chr5,chr5,chr5	-,+,+	RBM22,SYNPO,SYNPO	57690,-2597,-2597
chr1:179047759-179048892	chr1	+	179047921	179048627	True	NM_022371,NM_001136000	chr1,chr1	+,-	TOR3A,ABL2	2484,63653
chr10:105036327-105036609	chr10	+	105036356	105036638	True	NM_032727,NM_001011663	chr10,chr10	+,-	INA,PCGF6	281,74303
chrX:124099221-124100365	chrX	+	124099393	124100137	True	NM_014253,NM_001163278,NM_001163279,NM_001195272	chrX,chrX,chrX,chrX	-,-,-,+	ODZ1,ODZ1,ODZ1,LOC100129520	-1727,-1727,-1727,353831
chr10:1203024-1203898	chr10	+	1203085	1203917	True	NR_015376,NM_004508	chr10,chr10	+,-	NCRNA00200,IDI1	1790,-108024
chr9:116326986-116327258	chr9	+	116327000	116327244	True	NM_017443,NM_134427	chr9,chr9	-,+	POLE3,RGS3	-153971,116
chr1:202933747-202935564	chr1	+	202933955	202935597	True	NM_016243,NM_001127687,NM_015999,NM_138391	chr1,chr1,chr1,chr1	-,-,-,+	CYB5R1,ADIPOR1,ADIPOR1,TMEM183A	857,-6255,-6470,40936
chr13:42004615-42005971	chr13	+	42004856	42005352	True	NM_004294,NR_002163	chr13,chr13	-,+	MTRF1,OR7E37P	-167143,11347
chr1:26503422-26503845	chr1	+	26503434	26503752	True	NM_015871,NM_032588,NM_006314,NR_023345	chr1,chr1,chr1,chr1	+,-,+,+	ZNF593,TRIM63,CNKSR1,CNKSR1	-7098,-109313,228,229
chr6:153305212-153305431	chr6	+	153305213	153305433	True	NM_194435,NM_012177,NM_001142522	chr6,chr6,chr6	+,-,-	VIP,FBXO5,FBXO5	-233342,-1010,-473
chr10:115934374-115934574	chr10	+	115934377	115934619	True	NR_031747,NM_198795,NM_018017	chr10,chr10,chr10	-,+,-	MIR2110,TDRD1,C10orf118	-439,4409,-13
chr10:75687145-75688589	chr10	+	75687234	75688450	True	NM_002658,NM_001001791	chr10,chr10	+,-	PLAU,C10orf55	-16423,-4699
chr22:16449600-16451105	chr22	+	16449622	16451011	True	NM_001005239,NR_001591	chr22,chr22	-,+	OR11H1,psiTPTE22	46,631789
chr22:16449600-16451105	chr14	-	19376384	19377775	False	NM_001145442,NM_001013354	chr14,chr14	-,+	POTEM,OR11H12	642550,-46
chr22:16449600-16451105	chr14	+	19807281	19808623	False	NM_001145442,NR_027480	chr14,chr14	-,+	POTEM,POTEG	211700,-253977
chr22:16449600-16451105	chr14	+	20181941	20183626	False	NM_001197287,NM_172194	chr14,chr14	-,+	OR11H2,OR4Q3	550,31960
chr3:112537788-112539552	chr3	+	112538099	112539100	True	NM_001008784,NM_014170	chr3,chr3	-,+	CD200R1L,GTPBP8	25754,170699
chr22:40306571-40307828	chr22	+	40306802	40307803	True	NM_004810,NM_152512	chr22,chr22	+,-	GRAP2,ENTHD1	-9777,-17008
chr7:72439822-72440241	chr7	+	72440036	72440146	True	NR_033323,NR_003602	chr7,chr7	-,+	NSUN5P2,LOC541473	-14734,45
chr7:72439822-72440241	chr7	-	75024753	75024863	False	NM_198853,NM_198924,NR_003614	chr7,chr7,chr7	+,+,-	TRIM74,TRIM73,PMS2L2	39,39,-36538
chr17:40274331-40274590	chr17	+	40274376	40274590	True	NM_021078,NM_033194,NM_024119	chr17,chr17,chr17	-,+,-	KAT2A,HSPB9,DHX58	-994,165,-9625
chr3:125595879-125597595	chr3	+	125595914	125597442	True	NM_001015050,NR_024250	chr3,chr3	-,+	ALG1L,LOC100125556	58495,38001
chr3:40517707-40518357	chr3	+	40517905	40518147	True	NM_001145083,NM_001145082,NR_033965,NM_001145093,NR_026746	chr3,chr3,chr3,chr3,chr3	+,+,-,+,+	ZNF619,ZNF619,FLJ33065,ZNF619,ZNF619	485,456,-166716,456,456
chr5:124182198-124182911	chr5	+	124182495	124182854	True	NM_004384,NM_020747	chr5,chr5	+,-	CSNK1G3,ZNF608	-1334764,-101690
chr7:36395754-36397729	chr7	+	36395768	36396963	True	NM_018685,NM_015314,NM_001199708,NM_001199707,NM_001199706	chr7,chr7,chr7,chr7,chr7	+,-,-,-,-	ANLN,KIAA0895,KIAA0895,KIAA0895,KIAA0895	32468,9937,9965,9869,9929
chr3:138328171-138328875	chr3	+	138328176	138328833	True	NM_018147,NM_001033030,NM_001033032,NM_024491,NM_001033031	chr3,chr3,chr3,chr3,chr3	+,+,+,-,+	FAIM,FAIM,FAIM,CEP70,FAIM	-309,-686,-686,-15047,-686
chr2:145275338-145276070	chr2	+	145275457	145276071	True	NR_033258,NM_001171653,NR_033870,NM_014795	chr2,chr2,chr2,chr2	-,-,+,-	ZEB2,ZEB2,DKFZp686O1327,ZEB2	1938,1938,149462,1938
chr18:24444336-24444618	chr18	+	24444440	24444630	True	NM_004028,NR_026908,NM_001650	chr18,chr18,chr18	-,+,-	AQP4,C18orf16,AQP4	-1865,641,1136
chr13:27826267-27827180	chr13	+	27826282	27827213	True	NM_000982,NR_002574,NM_182488,NR_026911,NR_002575	chr13,chr13,chr13,chr13,chr13	+,+,-,+,+	RPL21,SNORD102,USP12,RPL21P28,SNORA27	-648,1987,-80249,-647,2324
chr19:50370968-50371355	chr19	+	50370979	50371053	True	NM_032375,NM_024682,NM_007254,NM_001168222,NM_001098633,NM_001098632	chr19,chr19,chr19,chr19,chr19,chr19	-,+,-,+,-,-	AKT1S1,TBC1D17,PNKP,TBC1D17,AKT1S1,AKT1S1	9579,9628,-157,9628,9613,9645
chr4:140586398-140586951	chr4	+	140586577	140586873	True	NM_002413,NM_001204366,NM_001204367,NM_001204368,NM_030648	chr4,chr4,chr4,chr4,chr4	+,+,+,+,-	MGST2,MGST2,MGST2,MGST2,SETD7	48,48,48,48,-109000
chr4:13544482-13544904	chr4	+	13544486	13544922	True	NR_015450,NM_001189,NR_003132	chr4,chr4,chr4	-,-,+	LOC285548,NKX3-2,HSP90AB2P	4576,1242,-209500
chr9:97356038-97356602	chr9	+	97356117	97356611	True	NM_003837,NM_001193331	chr9,chr9	-,+	FBP2,C9orf3	-42,132339
chr14:24713191-24713516	chr14	+	24713191	24713253	True	NM_001099274,NM_012461,NM_016576	chr14,chr14,chr14	-,-,+	TINF2,TINF2,GMPR2	-1311,-1311,-11139
chr19:52263146-52264427	chr19	+	52263145	52264447	True	NM_002029,NM_001462,NM_001193306,NM_001005738	chr19,chr19,chr19,chr19	-,+,-,+	FPR1,FPR2,FPR1,FPR2	-7995,2194,-7995,5
chr5:56506096-56507176	chr5	+	56506190	56506936	True	NM_152622,NM_001127236	chr5,chr5	-,+	MIER3,GPBP1	-258236,2964
chr16:65257764-65259719	chr16	+	65257800	65259735	True	NM_001795,NM_001797	chr16,chr16	+,-	CDH5,CDH11	1140789,-101881
chr6:135377712-135378685	chr6	+	135377829	135378653	True	NM_001145158,NM_005375,NM_001145207,NM_006620	chr6,chr6,chr6,chr6	-,+,-,-	HBS1L,MYB,HBS1L,HBS1L	-1793,123799,-1793,-1793
chr20:43343363-43343972	chr20	+	43343389	43344005	True	NR_034104,NM_003881	chr20,chr20	-,+	LOC79015,WISP2	-43009,9
chr1:12915301-12915971	chr1	+	12915541	12915866	True	NM_001013631,NM_023014,NM_001146181	chr1,chr1,chr1	-,+,-	HNRNPCL1,PRAMEF2,LOC649330	-6963,1074,-7304
chr1:12915301-12915971	chr1	+	12850352	12850402	False	NM_023013,NM_001146344	chr1,chr1	+,-	PRAMEF1,PRAMEF11	1143,40912
chr17:36003505-36004120	chr17	+	36003558	36004168	True	NM_007010,NM_007026	chr17,chr17	-,+	DDX52,DUSP14	-65,-153665
chr22:30726384-30727222	chr22	+	30726533	30727131	True	NM_001204240,NM_031937,NM_001017437	chr22,chr22,chr22	-,-,+	TBC1D10A,TBC1D10A,CCDC157	-3578,-3578,25495
chr1:46640750-46641635	chr1	+	46640825	46641529	True	NM_017739,NM_005727	chr1,chr1	-,+	POMGNT1,TSPAN1	22642,-127
chr11:49453986-49455016	chr11	+	49454121	49455053	True	NR_027044,NM_004476	chr11,chr11	+,-	LOC440040,FOLH1	125026,-223899
chr2:175348992-175350044	chr2	+	175349042	175350008	True	NM_001033045,NM_152529,NM_024583	chr2,chr2,chr2	-,-,+	GPR155,GPR155,SCRN3	1863,1863,-88637
chr16:88870794-88871003	chr16	+	88870837	88871030	True	NM_000485,NM_001030018,NM_030928	chr16,chr16,chr16	-,-,+	APRT,APRT,CDT1	7362,7362,-702
chr12:124444010-124445788	chr12	+	124444140	124445402	True	NM_025140,NM_001204298	chr12,chr12	-,+	CCDC92,ZNF664	11811,12359
chr19:2458452-2459825	chr19	+	2458487	2459698	True	NM_032737,NM_015675	chr19,chr19	-,+	LMNB2,GADD45B	-1529,16424
chr10:27535635-27537133	chr10	+	27535801	27537080	True	NR_003525,NM_032844,NM_145698,NR_024150,NM_001042473	chr10,chr10,chr10,chr10,chr10	-,+,-,-,-	LOC387646,MASTL,ACBD5,ACBD5,ACBD5	4208,-92099,-5993,-4733,-4733
chr9:98076856-98077665	chr9	+	98077092	98077441	True	NM_000136,NR_029496	chr9,chr9	-,+	FANCC,MIR24-1	2601,-228853
chr22:23329920-23331159	chr22	+	23330142	23330667	True	NM_002073,NM_014433	chr22,chr22	+,-	GNAZ,RTDR1	82001,153625
chr14:27068352-27068854	chr14	+	27068362	27068871	True	NM_002515,NM_006489,NR_036193,NM_006491	chr14,chr14,chr14,chr14	-,-,+,-	NOVA1,NOVA1,MIR4307,NOVA1	-1402,-1402,308976,-1402
chr1:104112285-104113124	chr1	+	104112410	104113106	True	NR_024438,NM_001008218	chr1,chr1	+,-	LOC648740,AMY1B	-435,125833
chrY:24328070-24329040	chrY	+	24328575	24328659	True	NM_001006117,NR_002175,NM_152585	chrY,chrY,chrY	-,+,-	RBMY1J,TTTY6B,RBMY1F	486,-37501,486
chrY:24328070-24329040	chrY	-	24550068	24550135	False	NM_001006117,NR_002175	chrY,chrY	+,-	RBMY1J,TTTY6B	-503,37508
chr8:145838209-145839804	chr8	+	145838446	145839631	True	NM_014665,NM_025251	chr8,chr8	+,-	LRRC14,ARHGAP39	-95142,0
chr15:95994334-95994615	chr15	+	95994463	95994653	True	NR_027133,NR_034095	chr15,chr15	+,-	LOC145820,LOC400456	-18199,-124134
chr1:117457230-117457958	chr1	+	117457528	117457892	True	NM_020440,NM_001145635	chr1,chr1	+,-	PTGFRN,TRIM45	-4892,206569
chr6:170892992-170893234	chr6	+	170892991	170893233	True	NM_001172085,NM_001199461,NM_001199462,NM_001199463,NM_001199464,NM_002598	chr6,chr6,chr6,chr6,chr6,chr6	+,-,-,-,-,-	TBP,PDCD2,PDCD2,PDCD2,PDCD2,PDCD2	-29621,597,559,559,559,597
chr9:100174899-100175208	chr9	+	100174959	100175249	True	NR_026847,NM_014290	chr9,chr9	-,+	LOC286359,TDRD7	-15986,-712
chr2:107483946-107484767	chr2	+	107483952	107484596	True	NR_003506,NM_001142351	chr2,chr2	+,-	PLGLA,ST6GAL2	-481234,18064
chr17:36997418-36997768	chr17	+	36997466	36997674	True	NM_006148,NM_001080465	chr17,chr17	+,-	LASP1,C17orf98	28437,18
chr1:66464790-66465240	chr1	+	66464825	66465257	True	NM_005478,NM_001037340	chr1,chr1	-,+	INSL5,PDE4B	801735,-6490
chr2:201830434-201831418	chr2	+	201830657	201831213	True	NR_033915,NM_001142356,NM_006190	chr2,chr2,chr2	-,+,-	ORC2,NIF3L1,ORC2	-2233,-74068,-2233
chrX:99904921-99905257	chrX	+	99904938	99905292	True	NM_003270,NM_014467	chrX,chrX	-,+	TSPAN6,SRPX2	-13144,-5826
chr22:42526718-42527059	chr22	+	42526788	42526986	True	NM_001025161,NM_000106,NR_034118	chr22,chr22,chr22	-,-,+	CYP2D6,CYP2D6,LOC100132273	9,9,-39902
chr22:42526718-42527059	chr22	+	42540532	42540658	False	NR_002570,NR_034118	chr22,chr22	-,+	CYP2D7P1,LOC100132273	29,-53646
chr17:76778841-76779100	chr17	+	76778845	76778944	True	NM_017456,NM_030968,NM_004762	chr17,chr17,chr17	-,+,-	CYTH1,C1QTNF1,CYTH1	-469,241306,-469
chr18:13008561-13009722	chr18	+	13008588	13009559	True	NM_002828,NM_032142	chr18,chr18	-,+	PTPN2,CEP192	-124254,-17278
chr8:11665872-11666110	chr8	+	11665897	11666089	True	NM_004462,NM_001908	chr8,chr8	+,-	FDFT1,CTSB	-5758,59607
chr1:17577787-17579105	chr1	+	17577800	17578864	True	NM_016233,NM_007365	chr1,chr1	+,-	PADI3,PADI2	-2258,-131852
chr9:67925962-67926388	chr9	+	67925995	67926417	True	NR_027422,NM_001012419,NM_032250	chr9,chr9,chr9	-,+,+	FAM27B,ANKRD20A3,ANKRD20A1	-131806,343,343
chr9:67925962-67926388	chr9	+	69381215	69381541	False	NM_001085457,NM_001098805	chr9,chr9	-,+	CBWD6,ANKRD20A4	-118622,439
chr9:67925962-67926388	chr9	-	44118995	44119049	False	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	-488265,-434165
chr9:67925962-67926388	chr9	+	42367593	42367968	False	NR_003670,NM_001012419,NM_001012421	chr9,chr9,chr9	-,+,+	KGFLP2,ANKRD20A3,ANKRD20A2	-348009,334,334
chr9:67925962-67926388	chr9	-	43133983	43134309	False	NM_001012419,NR_026558,NM_001012421	chr9,chr9,chr9	-,+,-	ANKRD20A3,AQP7P3,ANKRD20A2	-439,-275882,-439
chr2:27498981-27499622	chr2	+	27499230	27499670	True	NM_003459,NM_173650,NM_187841,NM_032546	chr2,chr2,chr2,chr2	-,+,+,+	SLC30A3,DNAJC5G,TRIM54,TRIM54	-13270,-992,5626,5626
chr1:212742214-212743928	chr1	+	212742215	212743957	True	NM_001030287,NM_018664	chr1,chr1	+,-	ATF3,BATF3	-3569,129420
chr3:183768925-183770169	chr3	+	183769467	183770117	True	NM_001023587,NM_130770	chr3,chr3	-,+	ABCC5,HTR3C	-33740,717
chr14:95236819-95237572	chr14	+	95236862	95237582	True	NR_015340,NM_173849	chr14,chr14	+,-	SERPINA13,GSC	-129851,-363
chr7:30518569-30519362	chr7	+	30518651	30519196	True	NM_006092,NR_002186	chr7,chr7	-,+	NOD1,DKFZP586I1420	-258,-109036
chr7:99570882-99571393	chr7	+	99570900	99571101	True	NM_001185,NR_036679	chr7,chr7	-,+	AZGP1,AZGP1P1	2695,7283
chrX:153608834-153609259	chrX	+	153608848	153609302	True	NM_001110556,NM_000117,NM_001456	chrX,chrX,chrX	-,+,-	FLNA,EMD,FLNA	-5842,-1302,-5842
chr2:39349978-39350657	chr2	+	39350020	39350450	True	NM_005633,NM_001145451	chr2,chr2	-,+	SOS1,ARHGEF33	-2416,-203568
chr20:36137184-36138431	chr20	+	36137345	36138280	True	NM_005386,NM_001167823	chr20,chr20	+,-	NNAT,BLCAP	11326,14723
chr12:133692983-133694690	chr12	+	133692999	133694430	True	NM_015394,NM_001191054	chr12,chr12	+,-	ZNF10,LOC647589	12783,118052
chr11:71954253-71954815	chr11	+	71954262	71954694	True	NM_005169,NM_001567	chr11,chr11	-,+	PHOX2A,INPPL1	576,-18431
chr16:2868124-2868337	chr16	+	2868144	2868386	True	NR_026864,NM_144956,NM_006799,NM_144957	chr16,chr16,chr16,chr16	-,+,+,+	PRSS30P,PRSS21,PRSS21,PRSS21	24416,-1031,-1031,-1031
chr11:121326625-121328094	chr11	+	121326803	121328123	True	NR_029671,NM_003105	chr11,chr11	-,+	MIR125B1,SORL1	642479,-3942
chr11:2292912-2293162	chr11	+	2293090	2293170	True	NM_139022,NM_005170	chr11,chr11	+,-	TSPAN32,ASCL2	30072,-908
chr3:11303445-11304214	chr3	+	11303569	11304244	True	NM_000861,NM_006395,NM_001144912,NM_001136031,NM_001128221	chr3,chr3,chr3,chr3,chr3	+,+,+,+,-	HRH1,ATG7,ATG7,ATG7,VGLL4	-9236,9765,9765,9765,306204
chr13:114238797-114239024	chr13	+	114238809	114239047	True	NM_000705,NM_007111,NR_026580	chr13,chr13,chr13	-,+,+	ATP4B,TFDP1,TFDP1	73516,8,23
chr13:101187378-101188131	chr13	+	101187577	101188119	True	NM_001178004,NM_033110	chr13,chr13	+,-	PCCA,A2LD1	-446371,-1521
chr3:183966363-183966693	chr3	+	183966374	183966468	True	NM_005787,NM_001006941,NR_030410,NM_032331,NM_014693,NR_024534,NR_024533	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,+,+,+,-,-	ALG3,ALG3,MIR1224,ECE2,ECE2,ALG3,ALG3	341,895,-7232,976,976,341,341
chr10:35930007-35930372	chr10	+	35930052	35930252	True	NM_153368,NM_031866	chr10,chr10	+,-	GJD4,FZD8	-35765,160
chr1:23751445-23752314	chr1	+	23751564	23751936	True	NR_033691,NM_003196	chr1,chr1	+,-	C1orf213,TCEA3	-55904,-303
chr7:135413021-135414664	chr7	+	135413197	135414559	True	NM_001130929,NM_012450	chr7,chr7	+,-	PL-5283,SLC13A4	-66027,-264
chr12:132195048-132195350	chr12	+	132195049	132195337	True	NM_175066,NM_004592	chr12,chr12	-,+	DDX51,SFSWAP	433593,297
chr22:17273129-17273993	chr22	+	17273256	17273854	True	NR_003607,NM_175878	chr22,chr22	+,-	HSFY1P1,XKR3	34509,28792
chr16:125460-126449	chr16	+	125800	126152	True	NM_001015052,NM_022450,NM_002434,NM_001015054	chr16,chr16,chr16,chr16	+,-,+,+	MPG,RHBDF1,MPG,MPG	2016,-3171,2016,865
chr7:48244101-48244416	chr7	+	48244117	48244381	True	NM_152701,NM_152782	chr7,chr7	+,-	ABCA13,SUN3	-33111,-175401
chr2:173694167-173696087	chr2	+	173694180	173695766	True	NR_026995,NM_001100397	chr2,chr2	-,+	LOC91149,RAPGEF4	-93246,-7916
chrX:47006105-47007233	chrX	+	47006337	47007153	True	NR_024235,NR_024234,NM_019056,NM_001135998,NM_005676,NM_001204467,NM_001204466,NM_152856,NM_001204468	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,+,+,+,+,+	NDUFB11,NDUFB11,NDUFB11,NDUFB11,RBM10,RBM10,RBM10,RBM10,RBM10	-1728,-1728,-2242,-2242,-1772,-1772,-1772,-1772,-1772
chr11:46356252-46357455	chr11	+	46356442	46357418	True	NM_000741,NM_201532,NM_201533	chr11,chr11,chr11	-,+,+	CHRM4,DGKZ,DGKZ	50739,-2038,9398
chr1:55679623-55679962	chr1	+	55679634	55679987	True	NM_015306,NM_174936	chr1,chr1	-,+	USP24,PCSK9	1102,-174536
chr21:45682811-45683108	chr21	+	45683096	45683156	True	NM_000383,NM_175867,NM_013369	chr21,chr21,chr21	+,-,-	AIRE,DNMT3L,DNMT3L	22606,-997,-997
chr12:122328116-122328872	chr12	+	122328130	122328850	True	NM_001171993,NM_002813	chr12,chr12	-,+	HPD,PSMD9	-1613,-1535
chr9:125693846-125694418	chr9	+	125693861	125694452	True	NM_012197,NM_020924	chr9,chr9	+,-	RABGAP1,ZBTB26	8835,-82
chr6:53888490-53889726	chr6	+	53889190	53889565	True	NM_138569,NM_001003760	chr6,chr6	+,-	C6orf142,KLHL31	-5535,-358684
chr3:185214702-185215698	chr3	+	185214800	185215721	True	NM_080652,NM_021627	chr3,chr3	-,+	TMEM41A,SENP2	1175,88309
chr15:31949249-31949459	chr15	+	31949284	31949414	True	NM_015995,NM_130901	chr15,chr15	+,-	KLF13,OTUD7A	-330252,-1742
chr15:31949249-31949459	chr15	-	31040644	31040694	False	NM_017762,NM_001039841	chr15,chr15	-,+	MTMR10,ARHGAP11B	243163,-121816
chr19:52511832-52512163	chr19	+	52511846	52512144	True	NM_198480,NM_001199324,NM_024840	chr19,chr19,chr19	-,-,+	ZNF615,ZNF615,ZNF613	-363,-363,-81209
chr2:198702331-198704326	chr2	+	198702349	198703946	True	NM_006226,NM_197970	chr2,chr2	+,-	PLCL1,BOLL	-32974,-51411
chr19:47105199-47105421	chr19	+	47105241	47105459	True	NM_001205281,NM_005184	chr19,chr19	-,+	LOC100506012,CALM3	-784,-780
chr1:51810254-51810521	chr1	+	51810260	51810438	True	NM_014372,NM_001144832	chr1,chr1	+,-	RNF11,TTC39A	-108366,397
chr19:16738966-16739205	chr19	+	16739023	16739087	True	NM_004831,NM_024074	chr19,chr19	-,+	MED26,TMEM38A	-8,32850
chr6:150365986-150367722	chr6	+	150366143	150367477	True	NM_025218,NM_130900	chr6,chr6	+,-	ULBP1,RAET1L	-81051,-19475
chr11:33912192-33913185	chr11	+	33912272	33913103	True	NM_203364,NM_005574	chr11,chr11	+,-	CAPRIN1,LMO2	160126,783
chr8:37374655-37376343	chr8	+	37374694	37376257	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	177043,229358
chrX:14932659-14933846	chrX	+	14932842	14933872	True	NM_152633,NM_001177475	chrX,chrX	-,+	FANCB,MOSPD2	-41658,-29487
chr19:43271145-43272418	chr19	+	43271149	43272455	True	NM_001130168,NR_036584,NM_182707,NM_001130167	chr19,chr19,chr19,chr19	-,+,-,-	PSG8,LOC100289650,PSG8,PSG8	-1318,53559,-1318,-1318
chr7:123244355-123245792	chr7	+	123244654	123245213	True	NM_080928,NM_005000	chr7,chr7	+,-	ASB15,NDUFA5	3898,-46696
chr22:29877218-29877967	chr22	+	29877469	29877970	True	NR_002727,NM_021076	chr22,chr22	-,+	RFPL1S,NEFH	-39351,-1339
chr15:74046206-74046577	chr15	+	74046244	74046576	True	NM_025240,NM_001039614	chr15,chr15	+,-	CD276,C15orf59	-69673,-2428
chr1:145588152-145588871	chr1	+	145588151	145588773	True	NM_006099,NM_001012758	chr1,chr1	+,-	PIAS3,NUDT17	-12214,712
chr2:220043119-220043382	chr2	+	220043143	220043373	True	NM_001144889,NM_024293,NM_015680,NM_144712,NM_001144890	chr2,chr2,chr2,chr2,chr2	-,+,-,-,-	SLC23A3,FAM134A,CNPPD1,SLC23A3,SLC23A3	-8326,-255,-1441,-8326,-8326
chrX:32995271-32996879	chrX	+	32995526	32996432	True	NM_004007,NM_152631	chrX,chrX	-,+	DMD,FAM47B	41935,1964480
chr15:56213653-56214854	chr15	+	56214014	56214322	True	NM_198400,NM_198524	chr15,chr15	-,+	NEDD4,TEX9	-4685,443321
chr5:180288853-180289332	chr5	+	180288854	180289271	True	NR_027183,NM_152283,NM_001172638	chr5,chr5,chr5	+,-,-	LOC729678,ZFP62,ZFP62	-31946,-568,-568
chr3:10548807-10549391	chr3	+	10549155	10549439	True	NM_001683,NR_024146,NM_001001331	chr3,chr3,chr3	-,+,-	ATP2B2,GHRLOS,ATP2B2	-1887,-221768,-1887
chr12:104444004-104444433	chr12	+	104444101	104444431	True	NM_013320,NM_031302	chr12,chr12	+,-	HCFC2,GLT8D2	13804,-186
chr7:116964193-116964443	chr7	+	116964198	116964490	True	NR_002332,NR_024047,NM_003391	chr7,chr7,chr7	+,-,-	ST7OT3,WNT2,WNT2	-141514,-855,-855
chr3:80819508-80820413	chr3	+	80819756	80820399	True	NM_001128929,NM_000158	chr3,chr3	+,-	ROBO2,GBE1	-3672644,990601
chr12:58002359-58002889	chr12	+	58002384	58002852	True	NM_001111270,NM_182947,NM_001478,NM_178502	chr12,chr12,chr12,chr12	+,+,-,+	ARHGEF25,ARHGEF25,B4GALNT1,DTX3	1110,2365,24185,-3831
chr1:179920584-179921941	chr1	+	179920815	179921977	True	NM_014810,NM_022347	chr1,chr1	+,-	CEP350,TOR1AIP2	1930,-73874
chr4:166130015-166131117	chr4	+	166130019	166131135	True	NM_001161522,NM_007246,NM_001161521,NR_026575	chr4,chr4,chr4,chr4	+,+,+,-	KLHL2,KLHL2,KLHL2,GK3P	35,-1300,35,70090
chr22:22220532-22221338	chr22	+	22220711	22221257	True	NM_148176,NM_002745,NM_138957	chr22,chr22,chr22	+,-,-	PPIL2,MAPK1,MAPK1	-200489,771,771
chr22:42948828-42949250	chr22	+	42948928	42949116	True	NR_002184,NM_014509	chr22,chr22	-,+	RRP7B,SERHL2	28951,808
chr9:35160289-35160578	chr9	+	35160301	35160377	True	NM_006377,NM_025182	chr9,chr9	+,-	UNC13B,KIAA1539	1611,-44408
chr11:62559008-62559246	chr11	+	62559033	62559211	True	NM_199337,NM_001080501	chr11,chr11	+,-	TMEM179B,TMEM223	-4210,325
chr20:62527019-62527424	chr20	+	62527070	62527466	True	NM_025219,NR_031735	chr20,chr20	+,-	DNAJC5,MIR1914	-666,45482
chr19:12917389-12917786	chr19	+	12917410	12917782	True	NM_005809,NM_181738,NM_006397	chr19,chr19,chr19	-,-,+	PRDX2,PRDX2,RNASEH2A	-4716,-4716,-33
chr1:149899024-149899425	chr1	+	149899042	149899394	True	NM_181873,NM_005850,NM_014849,NM_016074,NM_001145862	chr1,chr1,chr1,chr1,chr1	-,-,-,+,-	MTMR11,SF3B4,SV2A,BOLA1,MTMR11	8925,803,-9608,-27938,9450
chr1:28669618-28670959	chr1	+	28669640	28670915	True	NM_014280,NM_017638	chr1,chr1	-,+	DNAJC8,MED18	-110098,-14191
chr12:5280550-5280879	chr12	+	5280594	5280846	True	NM_006422,NM_002234	chr12,chr12	-,+	AKAP3,KCNA5	-526251,-127561
chr12:56919945-56921115	chr12	+	56920215	56921057	True	NM_013267,NM_002898	chr12,chr12	-,+	GLS2,RBMS2	-38034,-4666
chr9:131486017-131486246	chr9	+	131486016	131486222	True	NM_013355,NM_032799	chr9,chr9	+,-	PKN3,ZDHHC12	-21265,236
chr10:92980926-92981353	chr10	+	92981061	92981369	True	NR_002779,NM_032373	chr10,chr10	-,+	NUDT9P1,PCGF5	-68224,-744
chr3:93782251-93782455	chr3	+	93782253	93782456	True	NM_001195643,NM_022072,NM_176815	chr3,chr3,chr3	-,+,-	DHFRL1,NSUN3,DHFRL1	-186,-460,-422
chr12:54519767-54520079	chr12	+	54520003	54520128	True	NR_026656,NR_026658	chr12,chr12	+,-	LOC400043,LOC100240735	-199,-44396
chr17:60561816-60562339	chr7	+	128177238	128177288	True	NM_183243,NM_018396	chr7,chr7	-,+	IMPDH1,METTL2B	-127202,-60506
chr16:69596566-69597228	chr16	+	69596654	69596956	True	NM_173214,NR_031719,NM_001113178,NM_006599,NM_138714,NM_138713	chr16,chr16,chr16,chr16,chr16,chr16	+,-,+,+,+,+	NFAT5,MIR1538,NFAT5,NFAT5,NFAT5,NFAT5	2040,2865,2040,2040,2040,2040
chr6:127836635-127836882	chr6	+	127836645	127836721	True	NM_001010905,NM_001012279	chr6,chr6	+,-	C6orf58,C6orf174	61597,3829
chr17:16891811-16892247	chr17	+	16891909	16892291	True	NM_015134,NM_012452	chr17,chr17	+,-	MPRIP,TNFRSF13B	53815,-16507
chr11:10773363-10774245	chr11	+	10773373	10774267	True	NM_014633,NR_004403	chr11,chr11	+,-	CTR9,SNORD97	-613,48938
chr17:74538895-74539223	chr17	+	74538906	74539240	True	NM_134268,NM_001077620	chr17,chr17	-,+	CYGB,PRCD	-5124,-2837
chr1:235324344-235324589	chr1	+	235324360	235324620	True	NM_001037277,NM_015014,NR_027762,NM_001161533	chr1,chr1,chr1,chr1	+,-,-,-	GGPS1,RBM34,RBM34,RBM34	167132,1,1,1
chr1:221913889-221914150	chr1	+	221914018	221914168	True	NM_021958,NM_144729,NM_144728,NM_007207	chr1,chr1,chr1,chr1	+,-,-,-	HLX,DUSP10,DUSP10,DUSP10	-861326,1398,-3216,1398
chrX:75649103-75649365	chrX	+	75649127	75649399	True	NM_020932,NR_029909	chrX,chrX	+,-	MAGEE1,MIR384	-1132,490436
chr10:13202457-13203211	chr10	+	13202583	13203251	True	NM_018518,NM_145314,NM_182751	chr10,chr10,chr10	+,-,+	MCM10,UCMA,MCM10	302,73127,302
chr17:30423447-30424347	chr17	+	30423607	30423955	True	NM_001033566,NR_002222	chr17,chr17	+,-	RHOT1,ARGFXP2	45517,54695
chr17:30423447-30424347	chr17	-	30330445	30330503	False	NM_018428,NM_052888	chr17,chr17	-,+	UTP6,LRRC37B	-101716,17651
chr14:71265488-71266147	chr14	+	71265623	71265827	True	NM_033141,NM_014982	chr14,chr14	-,+	MAP3K9,PCNX	10117,108294
chr20:35969307-35969926	chr20	+	35969336	35969832	True	NM_198291,NM_021081,NM_005417	chr20,chr20,chr20	+,-,+	SRC,GHRH,SRC	4724,-84037,3255
chr19:5341761-5342148	chr19	+	5341933	5342139	True	NM_130854,NM_130855,NM_002850,NM_181710,NM_130853	chr19,chr19,chr19,chr19,chr19	-,-,-,+,-	PTPRS,PTPRS,PTPRS,ZNRF4,PTPRS	-1119,-1119,-1119,113286,-1119
chr22:33451406-33453074	chr22	+	33451518	33452800	True	NM_000362,NM_001135774	chr22,chr22	+,-	TIMP3,SYN3	-254767,1627
chr22:24104749-24105394	chr22	+	24104761	24105313	True	NM_213720,NM_013378,NM_182520,NM_005940	chr22,chr22,chr22,chr22	-,-,+,+	CHCHD10,VPREB3,C22orf15,MMP11	4878,-8131,-106,9722
chr8:67419719-67420879	chr8	+	67419753	67420573	True	NM_001080416,NM_152765	chr8,chr8	-,+	MYBL1,C8orf46	104957,-14318
chr1:236768183-236768537	chr1	+	236768203	236768315	True	NM_018072,NM_201544	chr1,chr1	-,+	HEATR1,LGALS8	-362,-81227
chr1:40509161-40509471	chr1	+	40509160	40509272	True	NM_006367,NM_000310,NM_001105530	chr1,chr1,chr1	+,-,+	CAP1,PPT1,CAP1	-2959,53920,-2959
chr17:38444096-38444327	chr17	+	38444114	38444358	True	NM_001254,NM_152219	chr17,chr17	+,-	CDC6,GJD3	-19,76637
chr1:764638-766283	chr1	+	764774	766243	True	NR_024321,NR_015368	chr1,chr1	-,+	NCRNA00115,LOC643837	-1872,-1761
chr1:764638-766283	chr8	-	278795	279807	False	NR_003572,NM_012173	chr8,chr8	-,+	RPL23AP53,FBXO25	-96477,77000
chr8:17395350-17396405	chr8	+	17395461	17396403	True	NM_001164771,NM_003046,NM_004686	chr8,chr8,chr8	+,+,-	SLC7A2,SLC7A2,MTMR7	-66,-66,-124421
chr7:45147269-45148414	chr7	+	45147612	45148251	True	NM_030900,NM_199122,NR_002990,NR_002919,NR_002991,NM_004749,NM_005856	chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,-,+	TBRG4,TBRG4,SNORA5B,SNORA5A,SNORA5C,TBRG4,RAMP3	3117,3117,-1914,-3531,-2971,3117,49115
chr7:38314975-38315233	chr7	+	38314991	38315276	True	NM_001003806,NM_032016,NM_001003799	chr7,chr7,chr7	-,+,-	TARP,STARD3NL,TARP	-1743,-97109,-1743
chr8:33456601-33456852	chr8	+	33456730	33456797	True	NM_032509,NM_024025	chr8,chr8	+,-	MAK16,DUSP26	-114104,693
chr4:10117716-10117931	chr4	+	10117727	10117875	True	NM_005112,NM_017491,NM_000798	chr4,chr4,chr4	-,-,+	WDR1,WDR1,DRD5	748,748,-334520
chr17:56318611-56319492	chr17	+	56318832	56319466	True	NM_006151,NR_027647,NM_001160102,NM_001165927	chr17,chr17,chr17,chr17	+,+,+,-	LPO,LPO,LPO,MKS1	-3096,-3096,-3096,-21866
chr20:25388777-25389214	chr20	+	25388813	25389231	True	NM_021067,NM_001042472	chr20,chr20	+,-	GINS1,ABHD12	-542,-17195
chr19:40437703-40438871	chr19	+	40438141	40438577	True	NM_003890,NM_006503	chr19,chr19	-,+	FCGBP,PSMC4	2012,38495
chr3:52278878-52279293	chr3	+	52278887	52279191	True	NM_001122870,NM_007284,NM_144641	chr3,chr3,chr3	+,-,+	PPM1M,TWF2,PPM1M	994,-5704,617
chr2:48132589-48132801	chr2	+	48132627	48132849	True	NM_000179,NM_001190274	chr2,chr2	+,-	MSH6,FBXO11	-122457,133
chr19:39827840-39828110	chr19	+	39827877	39828093	True	NM_018028,NM_004877	chr19,chr19	+,-	SAMD4B,GMFG	5014,-1151
chr5:176056687-176056898	chr5	+	176056811	176056943	True	NM_001099408,NM_003085,NR_036239,NM_001001502	chr5,chr5,chr5,chr5	+,-,-,-	EIF4E1B,SNCB,MIR4281,SNCB	739,664,-310,664
chr20:42203209-42204700	chr20	+	42203211	42204636	True	NM_016276,NM_001199264,NM_001008901	chr20,chr20,chr20	+,+,-	SGK2,SGK2,GTSF1L	-8525,-9507,151070
chr16:57664108-57664504	chr16	+	57664131	57664503	True	NM_001145771,NM_001145773,NM_001145772,NM_001145774,NM_033212,NM_201525,NM_201524	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,-,+,+	GPR56,GPR56,GPR56,GPR56,CCDC102A,GPR56,GPR56	-1763,-1763,-1763,8703,-93654,-1763,-1763
chr5:1112936-1113173	chr5	+	1112936	1113217	True	NM_001003841,NM_006598	chr5,chr5	+,-	SLC6A19,SLC12A7	88492,-764
chrX:18706101-18706963	chrX	+	18706300	18707005	True	NM_000330,NM_152224,NM_152226,NM_006240	chrX,chrX,chrX,chrX	-,+,+,+	RS1,PPEF1,PPEF1,PPEF1	-16077,2039,2039,2039
chr15:55698742-55699932	chr15	+	55698911	55699948	True	NM_020739,NM_001198784,NM_001204451,NM_004748,NM_001204450	chr15,chr15,chr15,chr15,chr15	-,+,-,-,-	CCPG1,FLJ27352,CCPG1,CCPG1,CCPG1	810,774,810,676,810
chr1:212794599-212795400	chr1	+	212794662	212795223	True	NM_153606,NM_018664	chr1,chr1	+,-	FAM71A,BATF3	2565,78167
chr6:107347030-107347545	chr6	+	107347204	107347594	True	NM_001080450,NM_016487,NM_001142468,NM_001142470	chr6,chr6,chr6,chr6	-,+,+,+	BEND3,C6orf203,C6orf203,C6orf203	88092,1812,1812,1812
chr19:53899628-53900649	chr19	+	53899869	53900665	True	NM_001040185,NM_033341	chr19,chr19	+,-	ZNF765,BIRC8	-1530,-104994
chr9:126119961-126120407	chr9	+	126120056	126120406	True	NM_173689,NR_030332	chr9,chr9	+,-	CRB2,MIR601	-1659,44526
chr11:18126874-18127299	chr11	+	18127005	18127263	True	NM_138421,NM_054031	chr11,chr11	-,+	SAAL1,MRGPRX3	425,15238
chr16:54965880-54966090	chr16	+	54965902	54966117	True	NM_005853,NR_034105,NR_034106	chr16,chr16,chr16	+,-,-	IRX5,CRNDE,CRNDE	-842,-2823,-3212
chr21:46976781-46977179	chr21	+	46976780	46977218	True	NM_130444,NM_194255	chr21,chr21	+,-	COL18A1,SLC19A1	-101407,-14395
chr16:84853610-84854290	chr16	+	84853710	84854174	True	NM_001145548,NM_031476	chr16,chr16	-,+	ZDHHC7,CRISPLD2	191017,-174
chr12:4628849-4629490	chr12	+	4629138	4629510	True	NM_001130862,NM_020374	chr12,chr12	+,-	RAD51AP1,C12orf4	18439,18177
chr1:53020403-53021739	chr1	+	53020412	53021357	True	NM_001009881,NM_015696,NM_015269	chr1,chr1,chr1	-,+,-	ZCCHC11,GPX7,ZCCHC11	-1650,46685,-1650
chr19:1238255-1238475	chr19	+	1238326	1238524	True	NM_001001975,NM_001687,NM_152769	chr19,chr19,chr19	+,+,-	ATP5D,ATP5D,C19orf26	3224,3224,-336
chr3:63094020-63095749	chr3	+	63094120	63095792	True	NM_183394,NR_027104	chr3,chr3	-,+	CADPS,LOC285401	-233056,-5807
chr12:57432798-57434598	chr12	+	57432808	57434430	True	NM_007264,NM_005379	chr12,chr12	+,-	GPR182,MYO1A	-44504,9513
chr2:34110764-34111397	chr2	+	34110946	34111437	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-372067,-157662
chr11:33913185-33914389	chr11	+	33913318	33914372	True	NM_203364,NM_005574	chr11,chr11	+,-	CAPRIN1,LMO2	158857,44
chr3:46617445-46617679	chr3	+	46617483	46617686	True	NM_001174136,NM_024512,NM_003212	chr3,chr3,chr3	+,-,+	TDGF1,LRRC2,TDGF1	-1489,-9472,1389
chr22:30472858-30473710	chr22	+	30472931	30473725	True	NM_152510,NM_002309	chr22,chr22	+,-	HORMAD2,LIF	2727,169121
chr19:18668133-18668473	chr19	+	18668285	18668459	True	NM_001171949,NM_001171948,NM_012181,NM_024069	chr19,chr19,chr19,chr19	+,+,-,+	C19orf50,C19orf50,FKBP8,C19orf50	112,112,-13902,112
chr10:75547931-75548207	chr10	+	75548009	75548215	True	NM_015037,NM_003635,NM_203298	chr10,chr10,chr10	+,-,+	KIAA0913,NDST2,CHCHD1	-2463,23424,-6260
chr11:59519702-59520666	chr11	+	59520190	59520469	True	NM_004177,NM_001005324,NM_001178040	chr11,chr11,chr11	+,-,+	STX3,OR10V1,STX3	2062,-38872,2062
chr2:97650809-97651609	chr2	+	97650818	97651613	True	NM_001122646,NM_001164315	chr2,chr2	-,+	FAM178B,ANKRD36	738,127619
chr16:15188988-15189429	chr16	+	15189016	15189084	True	NM_018427,NM_015027	chr16,chr16	-,+	RRN3,PDXDC1	-858,-120234
chr12:43964305-43965756	chr12	+	43964324	43965749	True	NM_025003,NM_001114182	chr12,chr12	-,+	ADAMTS20,IRAK4	-18600,186997
chr12:111179511-111180005	chr12	+	111179682	111179942	True	NM_152591,NM_002710	chr12,chr12	+,-	CCDC63,PPP1CC	104868,865
chr9:69652124-69652786	chr9	+	69652136	69652834	True	NM_001085457,NR_024443	chr9,chr9	-,+	CBWD6,LOC100133920	-389543,-826
chr9:69652124-69652786	chr9	-	42856851	42857217	False	NR_026759,NR_026558	chr9,chr9	-,+	FAM95B1,AQP7P3	176145,934
chr9:69652124-69652786	chr9	-	67029840	67030206	False	NR_024443,NR_024496	chr9,chr9	-,+	LOC100133920,LOC442421	826,-535622
chr9:69652124-69652786	chr9	+	67290185	67290551	False	NM_032250,NR_002817	chr9,chr9	+,-	ANKRD20A1,AQP7P1	636209,-693
chr6:27445841-27446070	chr6	+	27445881	27446109	True	NM_001076781,NM_007149	chr6,chr6	+,-	ZNF391,ZNF184	-89408,-4984
chr15:30110044-30110798	chr15	+	30110319	30110692	True	NM_003257,NR_026859,NM_175610	chr15,chr15,chr15	-,+,-	TJP1,FAM7A3,TJP1	4073,285242,4073
chr8:92268432-92269225	chr8	+	92268510	92269135	True	NM_134266,NM_018710,NM_052832	chr8,chr8,chr8	+,-,+	SLC26A7,TMEM55A,SLC26A7	-7045,-215307,-7045
chr14:48142681-48143239	chr14	+	48142766	48143278	True	NR_037792,NM_001113498	chr14,chr14	+,-	LRR1,MDGA2	1922136,929
chr21:45552375-45552635	chr21	+	45552377	45552529	True	NM_198155,NM_004649,NM_015259	chr21,chr21,chr21	+,+,-	C21orf33,C21orf33,ICOSLG	964,964,108365
chr2:219133849-219134380	chr2	+	219133877	219134119	True	NM_015488,NM_001077191,NM_001087,NM_170699,NM_001077194,NM_001077399	chr2,chr2,chr2,chr2,chr2,chr2	+,+,-,+,+,+	PNKD,GPBAR1,AAMP,GPBAR1,GPBAR1,PNKD	995,-8192,824,-8192,-8192,995
chr7:75827936-75828389	chr7	+	75828200	75828296	True	NM_001110199,NM_016086	chr7,chr7	+,-	SRRM3,STYXL1	2919,-150879
chr19:49120596-49121446	chr19	+	49120618	49121465	True	NM_001204159,NM_001204158,NM_001204160,NM_000979,NM_017708,NM_020126	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,-,-,+	SPHK2,SPHK2,SPHK2,RPL18,FAM83E,SPHK2	1325,1082,6743,1021,-3924,1082
chr17:15631642-15632479	chr17	+	15631810	15632460	True	NM_006470,NM_178571	chr17,chr17	-,+	TRIM16,TBC1D26	-45617,3130
chr17:15631642-15632479	chr17	-	18551006	18551111	False	NM_001037330,NM_001039397	chr17,chr17	+,-	TRIM16L,TBC1D28	74290,-3266
chr19:58426786-58427286	chr19	+	58426845	58427131	True	NM_032828,NM_152475	chr19,chr19	+,-	ZNF587,ZNF417	-65715,897
chr15:78443586-78444643	chr15	+	78443585	78444350	True	NM_006383,NM_005530	chr15,chr15	-,+	CIB2,IDH3A	-19707,-1917
chr6:135373564-135375514	chr6	+	135373753	135375531	True	NM_001145158,NM_005375,NM_001145207,NM_006620	chr6,chr6,chr6,chr6	-,+,-,-	HBS1L,MYB,HBS1L,HBS1L	555,126921,555,555
chr19:21687090-21688410	chr19	+	21687092	21688248	True	NM_001001415,NM_021269	chr19,chr19	+,-	ZNF429,ZNF708	188,-174880
chr15:43803307-43804454	chr15	+	43803342	43804472	True	NM_002373,NM_005657	chr15,chr15	+,-	MAP1A,TP53BP1	5333,-635
chr1:162349722-162350218	chr1	+	162349722	162350191	True	NM_001135240,NM_001085375,NM_182581	chr1,chr1,chr1	+,+,-	C1orf226,C1orf226,C1orf111	-1077,1328,-3078
chr20:34558477-34558960	chr20	+	34558778	34558850	True	NM_080834,NM_016558	chr20,chr20	+,-	C20orf152,SCAND1	-2300,-15497
chr12:65675287-65675951	chr12	+	65675287	65675724	True	NM_007191,NM_001031679,NM_198080,NM_001193460,NM_001193461	chr12,chr12,chr12,chr12,chr12	-,+,+,+,+	WIF1,MSRB3,MSRB3,MSRB3,MSRB3	-159941,-2922,-2922,-2922,-2578
chr14:63561831-63562117	chr14	+	63561849	63562151	True	NM_172376,NM_020663	chr14,chr14	-,+	KCNH5,RHOJ	6483,108993
chr2:203138588-203139040	chr2	+	203138681	203138900	True	NR_003058,NM_015934,NM_003352	chr2,chr2,chr2	+,+,-	SNORD70,NOP58,SUMO1	2253,-8230,-35359
chr11:62786698-62788302	chr11	+	62786750	62787818	True	NM_001184736,NR_037193,NM_001184732,NM_001184733,NM_004254	chr11,chr11,chr11,chr11,chr11	-,+,-,-,-	SLC22A8,SLC3A2,SLC22A8,SLC22A8,SLC22A8	-3433,-137631,-3433,-3433,-3433
chr22:38399974-38400308	chr22	+	38400291	38400353	True	NM_006941,NM_021974	chr22,chr22	-,+	SOX10,POLR2F	-19752,-50668
chrX:35816430-35816809	chrX	+	35816434	35816808	True	NM_001099921,NM_031442	chrX,chrX	+,-	MAGEB16,TMEM47	-26,-1141029
chr17:40898361-40900352	chr17	+	40898986	40900174	True	NM_005854,NM_001991	chr17,chr17	+,-	RAMP2,EZH1	13037,-1915
chr4:25308022-25309594	chr4	+	25308043	25309417	True	NM_024936,NM_016955	chr4,chr4	+,-	ZCCHC4,SEPSECS	4978,-145839
chr10:116001431-116001976	chr10	+	116001489	116001976	True	NM_198496,NM_018017	chr10,chr10	+,-	VWA2,C10orf118	-2522,-67125
chr17:45723545-45723870	chr17	+	45723737	45723843	True	NM_002265,NR_033934	chr17,chr17	+,-	KPNB1,MRPL45P2	3431,-153751
chr6:10887950-10888420	chr6	+	10888003	10888304	True	NM_004752,NM_001040274	chr6,chr6	-,+	GCM2,SYCP2L	-5905,-990
chr4:155408418-155410354	chr4	+	155408478	155410378	True	NM_001142552,NM_001142553,NM_001184741	chr4,chr4,chr4	-,-,+	DCHS2,DCHS2,FGB	2549,2602,73753
chr17:27332067-27332320	chr17	+	27332159	27332297	True	NM_001098635,NM_178860,NM_016518	chr17,chr17,chr17	-,-,+	SEZ6,SEZ6,PIPOX	834,834,37620
chr3:191300441-191300738	chr3	+	191300441	191300548	True	NM_001083308,NM_198152	chr3,chr3	+,-	PYDC2,UTS2D	-121545,-252116
chr20:57224243-57224596	chr20	+	57224242	57224482	True	NR_037945,NR_037941,NR_037943,NR_037942,NM_153360,NM_001134773,NM_001134772,NM_003763,NM_001204868,NM_001001433	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,+,+,+,-,+,+,+,+,+	STX16-NPEPL1,STX16,STX16,STX16,APCDD1L,STX16,STX16,STX16,STX16,STX16	1826,1826,1826,1826,-134293,1826,1826,1826,1826,1826
chr10:102026825-102027170	chr10	+	102026831	102027133	True	NM_018294,NM_005063	chr10,chr10	-,+	CWF19L1,SCD	354,79638
chr3:99595249-99595809	chr3	+	99595258	99595825	True	NM_014890,NM_032359	chr3,chr3	-,+	FILIP1L,C3orf26	-212,-58631
chr8:95835995-95836615	chr8	+	95836011	95836579	True	NM_017864,NM_057749	chr8,chr8	+,-	INTS8,CCNE2	-528,70960
chr18:14501374-14501845	chr18	+	14501477	14501825	True	NR_024076,NR_026756	chr18,chr18	-,+	CXADRP3,LOC284233	-2772,-164106
chr9:113431886-113432594	chr9	+	113431933	113432604	True	NM_153366,NM_005592,NM_001166280,NM_001166281	chr9,chr9,chr9,chr9	-,+,+,+	SVEP1,MUSK,MUSK,MUSK	-89773,-933,-933,-933
chr11:67181743-67182287	chr11	+	67182188	67182310	True	NM_001166222,NM_020811,NM_206873	chr11,chr11,chr11	+,+,-	CARNS1,CARNS1,PPP1CA	838,838,-12812
chr10:94822879-94823102	chr10	+	94822963	94823151	True	NM_013451,NM_183374	chr10,chr10	-,+	MYOF,CYP26C1	418973,-1993
chr3:48661149-48662267	chr3	+	48661290	48662038	True	NM_001040454,NM_033629,NM_001008269	chr3,chr3,chr3	-,+,-	SLC26A6,TREX1,TMEM89	9291,-154112,-2101
chr14:103993870-103995083	chr14	+	103993983	103995037	True	NM_152307,NM_001823	chr14,chr14	+,-	TRMT61A,CKB	471,-4813
chrX:63560045-63561078	chrX	+	63560098	63561031	True	NM_001010888,NM_017677	chrX,chrX	+,-	ZC3H12B,MTMR8	1147583,54363
chr5:157169686-157170456	chr5	+	157169690	157170352	True	NM_173491,NM_178424	chr5,chr5	+,-	LSM11,SOX30	402,-90262
chr18:32365169-32366280	chr18	+	32365205	32366322	True	NM_001390,NM_001112734	chr18,chr18	+,-	DTNA,ZSCAN30	-29329,503929
chr17:42767250-42767854	chr17	+	42767270	42767732	True	NM_001099225,NM_144609,NR_036623	chr17,chr17,chr17	-,-,+	CCDC43,CCDC43,DBF4B	-105,-105,18243
chr6:14702582-14704163	chr6	+	14702651	14704179	True	NM_001031713,NM_004973	chr6,chr6	-,+	CCDC90A,JARID2	-887862,542347
chr7:64253249-64254269	chr7	+	64253285	64254116	True	NR_027661,NM_006524,NM_001160183,NR_027660,NR_002789	chr7,chr7,chr7,chr7,chr7	+,+,+,+,-	ZNF138,ZNF138,ZNF138,ZNF138,LOC168474	654,654,654,654,60121
chr1:1198042-1198453	chr1	+	1198048	1198444	True	NM_058167,NM_001130413	chr1,chr1	-,+	UBE2J2,SCNN1D	10842,12193
chr5:134207255-134208066	chr5	+	134207349	134208063	True	NM_002653,NM_024715	chr5,chr5	-,+	PITX1,TXNDC15	161959,1396
chr20:61198451-61199964	chr20	+	61198614	61199952	True	NR_033263,NR_029676	chr20,chr20	-,+	C20orf200,MIR133A2	-49846,-36547
chr3:139107626-139108205	chr3	+	139107748	139108099	True	NM_004766,NR_023350,NM_020191	chr3,chr3,chr3	-,-,+	COPB2,COPB2,MRPS22	473,473,-44945
chr5:174873016-174873398	chr5	+	174873110	174873249	True	NM_022754,NM_000794	chr5,chr5	+,-	SFXN1,DRD1	32264,-1947
chr17:26984167-26985890	chr17	+	26984969	26985251	True	NM_006923,NM_003170	chr17,chr17	-,+	SDF2,SUPT6H	3732,4050
chr1:33547736-33547983	chr1	+	33547773	33547933	True	NR_037592,NM_052998	chr1,chr1	-,+	AK2,ADC	-45261,-1110
chr1:94374559-94374840	chr1	+	94374574	94374836	True	NR_030621,NM_002061	chr1,chr1	+,-	MIR760,GCLM	-62237,226
chr17:33476566-33477623	chr17	+	33476804	33477440	True	NM_018096,NM_173167,NM_001014445,NM_001033576	chr17,chr17,chr17,chr17	-,+,-,+	NLE1,UNC45B,NLE1,UNC45B	-7482,-2019,-7482,-2019
chr2:165683303-165683752	chr2	+	165683303	165683802	True	NM_001040142,NM_014900	chr2,chr2	+,-	SCN2A,COBLL1	412109,14177
chr15:37389898-37390150	chr15	+	37389939	37390155	True	NM_170674,NM_170675,NM_170676,NM_170677,NM_172315,NM_172316,NM_002399,NM_032499	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,-,-,-,-,-,+	MEIS2,MEIS2,MEIS2,MEIS2,MEIS2,MEIS2,MEIS2,C15orf41	2599,2599,2599,2599,398,1492,3395,-457184
chr2:96680573-96680800	chr2	+	96680673	96680797	True	NM_207328,NR_003698	chr2,chr2	-,+	GPAT2,LOC729234	19980,-4432
chr11:6505069-6505409	chr11	+	6505070	6505315	True	NM_012192,NM_006458,NM_033278,NM_012402	chr11,chr11,chr11,chr11	+,-,-,-	FXC1,TRIM3,TRIM3,ARFIP2	-2451,-9865,-9865,-2475
chr6:109803082-109803401	chr6	+	109803081	109803406	True	NM_014797,NM_003080,NM_001164313	chr6,chr6,chr6	-,+,-	ZBTB24,SMPD2,ZBTB24	1084,-41203,1084
chr14:101349171-101349464	chr14	+	101349170	101349458	True	NR_029965,NR_029966,NR_029699,NR_029696,NR_030173,NR_030617,NR_029889,NM_001134888	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,+,+,+,+,-	MIR431,MIR433,MIR136,MIR127,MIR432,MIR665,MIR337,RTL1	-1877,-998,1580,-9,1361,-7851,-8391,1776
chr7:152137426-152138925	chr7	+	152137839	152138655	True	NR_002935,NM_170606	chr7,chr7	+,-	FABP5P3,MLL3	-3910,-4749
chr2:172753292-172753973	chr2	+	172753715	172753807	True	NM_003705,NM_003642	chr2,chr2	-,+	SLC25A12,HAT1	-2902,25127
chr4:89946712-89948205	chr4	+	89946714	89948097	True	NM_014883,NM_145715	chr4,chr4	-,+	FAM13A,TIGD2	30284,85870
chr3:190592830-190593720	chr3	+	190592832	190593275	True	NR_024343,NM_001146686	chr3,chr3	+,-	SNAR-I,GEMC1	2443,-12367
chr1:184359196-184361135	chr1	+	184359195	184360635	True	NM_015101,NM_030806	chr1,chr1	-,+	GLT25D2,C1orf21	-352332,-3096
chr6:168596615-168597748	chr6	+	168596679	168597743	True	NM_030615,NM_024919	chr6,chr6	+,-	KIF25,FRMD1	-178179,-116840
chr22:32603497-32604489	chr22	+	32603617	32604457	True	NM_001098527,NM_006604,NM_001159546,NM_001159545	chr22,chr22,chr22,chr22	-,+,-,-	RFPL2,RFPL3,RFPL2,RFPL2	-4153,146414,-5080,-2899
chr4:16069790-16070780	chr4	+	16069791	16070407	True	NM_001145849,NM_001145850,NM_001145851,NM_001145852,NM_006017,NR_027696	chr4,chr4,chr4,chr4,chr4,chr4	-,-,-,-,-,+	PROM1,PROM1,PROM1,PROM1,PROM1,FLJ39653	7384,7384,7384,7384,7384,157878
chr7:148893350-148893554	chr7	+	148893393	148893581	True	NM_001001661,NM_003575	chr7,chr7	-,+	ZNF425,ZNF282	-69955,-867
chr2:11806546-11808167	chr2	+	11806838	11808168	True	NM_012344,NM_145693	chr2,chr2	-,+	NTSR2,LPIN1	2211,78571
chr4:185570618-185570860	chr4	+	185570784	185570866	True	NM_152683,NM_032991,NM_004346	chr4,chr4,chr4	+,-,-	CCDC111,CASP3,CASP3	-68,-155,-155
chr2:204804761-204805597	chr2	+	204804958	204805487	True	NM_203365,NM_012092	chr2,chr2	-,+	RAPH1,ICOS	-404900,-3538
chr11:125440100-125441492	chr11	+	125440188	125441187	True	NM_001007277,NM_022549,NM_004879	chr11,chr11,chr11	+,-,+	EI24,FEZ1,EI24	-941,-73982,-941
chr7:100825245-100826030	chr7	+	100825251	100826057	True	NM_198571,NM_001283	chr7,chr7	-,+	C7orf52,AP1S1	-1694,-27616
chr20:21492512-21492776	chr20	+	21492615	21492775	True	NM_002509,NM_006192	chr20,chr20	-,+	NKX2-2,PAX1	1939,193521
chr3:51999070-51999686	chr3	+	51999130	51999728	True	NM_080865,NM_001174100,NM_001146314,NM_033010,NR_027476,NM_015407,NR_037192,NM_033008,NM_032750,NM_020418	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,-,-,-,-,+,+,-,-,-	GPR62,PCBP4,ABHD14B,PCBP4,ABHD14B,ABHD14A,ABHD14A-ACY1,PCBP4,ABHD14B,PCBP4	-9852,1804,8968,-2222,8968,9313,9313,1804,8968,1772
chr5:75377753-75378017	chr5	+	75377783	75377935	True	NM_001099271,NM_014979	chr5,chr5	-,+	POC5,SV2C	-364470,1369
chr11:46260294-46260730	chr11	+	46260387	46260777	True	NM_016621,NM_052854	chr11,chr11	-,+	PHF21A,CREB3L1	-117402,38450
chr20:2819053-2819361	chr20	+	2819057	2819409	True	NM_080413,NM_022760,NM_022575	chr20,chr20,chr20	+,-,+	VPS16,FAM113A,VPS16	1963,1973,1963
chr1:203142951-203143596	chr1	+	203143050	203143594	True	NM_004997,NM_001048230	chr1,chr1	-,+	MYBPH,ADORA1	1398,-46265
chr16:28607140-28607768	chr16	+	28607216	28607808	True	NM_138414,NM_177528,NM_001054	chr16,chr16,chr16	+,-,-	CCDC101,SULT1A2,SULT1A2	-42018,43,633
chr16:28607140-28607768	chr16	+	28620205	28620419	False	NM_177529,NM_138414,NM_177530,NM_001055,NM_177534	chr16,chr16,chr16,chr16,chr16	-,+,-,-,-	SULT1A1,CCDC101,SULT1A1,SULT1A1,SULT1A1	988,-55007,280,988,280
chr20:635545-636058	chr20	+	635823	635996	True	NM_080725,NM_001042353	chr20,chr20	-,+	SRXN1,FAM110A	-1933,178359
chr17:6336833-6337465	chr17	+	6337104	6337454	True	NM_014336,NM_001195228,NM_001033054,NM_001033055	chr17,chr17,chr17,chr17	-,+,-,-	AIPL1,FAM64A,AIPL1,AIPL1	1115,10280,1115,1115
chr3:122744820-122745097	chr3	+	122744826	122745122	True	NM_006810,NM_001031702	chr3,chr3	+,-	PDIA5,SEMA5B	40733,1504
chr6:151710121-151710858	chr6	+	151710121	151710831	True	NM_020861,NM_024573	chr6,chr6	-,+	ZBTB2,C6orf211	1909,62590
chr8:145583394-145584539	chr8	+	145583461	145584513	True	NM_024531,NM_012162,NR_015428,NM_024555	chr8,chr8,chr8,chr8	+,-,-,-	GPR172A,FBXL6,C8ORFK29,FBXL6	-1287,-1329,-4956,-1329
chr2:113299047-113299428	chr2	+	113299140	113299408	True	NM_001137604,NR_033871,NM_019014	chr2,chr2,chr2	+,-,+	POLR1B,FLJ42351,POLR1B	83,102399,83
chr19:50938016-50938658	chr19	+	50938074	50938552	True	NM_004533,NM_138411	chr19,chr19	+,-	MYBPC2,FAM71E1	-1965,41501
chr9:110044832-110045221	chr9	+	110044963	110045267	True	NR_031752,NM_002874	chr9,chr9	-,+	MIR548Q,RAD23B	-196247,276
chr1:223194651-223195615	chr1	+	223194863	223195597	True	NM_032890,NM_003268	chr1,chr1	+,-	DISP1,TLR5	-206491,121077
chr11:6637979-6638855	chr11	+	6638005	6638849	True	NM_001014795,NM_000391,NM_006284	chr11,chr11,chr11	+,-,-	ILK,TPP1,TAF10	-12849,1893,-4560
chr2:84686440-84686748	chr2	+	84686461	84686709	True	NM_003849,NM_001370	chr2,chr2	-,+	SUCLG1,DNAH6	51,56869
chr19:48956893-48957670	chr19	+	48956950	48957382	True	NM_013348,NM_001080434,NM_031485,NM_170720	chr19,chr19,chr19,chr19	+,-,+,+	KCNJ14,LMTK3,GRWD1,KCNJ14	1383,59114,-7971,7123
chr2:132919797-132920009	chr2	+	132919797	132919999	True	NM_001508,NR_027019	chr2,chr2	+,-	GPR39,ANKRD30BL	254147,-272
chr19:2980331-2980836	chr19	+	2980331	2980463	True	NM_021217,NM_001143986,NM_024760	chr19,chr19,chr19	-,+,+	ZNF77,TLE6,TLE6	-35362,-2849,-2849
chr2:88124361-88124915	chr2	+	88124395	88124900	True	NM_001078170,NM_001032392	chr2,chr2	-,+	RGPD2,PLGLB1	436,-76836
chr11:64000869-64001437	chr11	+	64001012	64001437	True	NM_031472,NM_057092,NM_001160389,NM_001033678,NM_032344,NM_005528,NM_004470,NM_003377,NM_001160392,NM_001160393,NM_001160390,NM_001128613,NM_001128612,NM_001135208	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,+,-,-,+,+,+,+,-,-,-,+,+,+	TRPT1,FKBP2,TRPT1,TRPT1,NUDT22,DNAJC4,FKBP2,VEGFB,TRPT1,TRPT1,TRPT1,NUDT22,NUDT22,FKBP2	-7286,8150,-7286,-7286,-7325,-3310,6975,828,-7286,-7671,-7286,-7325,-7325,7166
chr14:105069048-105069757	chr14	+	105069216	105069790	True	NM_207379,NM_001008404	chr14,chr14	-,+	TMEM179,C14orf180	1357,-23211
chr12:69633812-69634051	chr12	+	69633936	69634052	True	NM_007007,NR_031692	chr12,chr12	+,-	CPSF6,MIR1279	-670,32996
chrX:47511774-47513764	chrX	+	47511978	47513608	True	NM_005229,NR_028119,NM_004182,NR_027444,NM_153477,NM_001114123	chrX,chrX,chrX,chrX,chrX,chrX	-,+,-,+,-,-	ELK1,LOC100133957,UXT,LOC100133957,UXT,ELK1	-1975,4623,5016,4643,4972,-1975
chr19:10515597-10515807	chr19	+	10515626	10515778	True	NM_007065,NM_001111307,NR_031592	chr19,chr19,chr19	-,+,-	CDC37,PDE4A,MIR1181	-1355,15554,-1412
chr10:47730570-47730805	chr10	+	47730609	47730669	True	NR_024495,NM_001630	chr10,chr10	-,+	LOC642826,ANXA8L2	-487115,16250
chr2:176988166-176988698	chr2	+	176988379	176988731	True	NM_002148,NM_019558,NM_014213,NM_001080458,NM_001199747,NM_001199746	chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,-,+,+	HOXD10,HOXD8,HOXD9,EVX2,HOXD8,HOXD8	-6939,5736,-1018,-39689,5690,5736
chr2:183943196-183943696	chr2	+	183943197	183943731	True	NM_205842,NM_001142314,NM_080876	chr2,chr2,chr2	-,+,+	NCKAP1,DUSP19,DUSP19	-39968,39,39
chr15:49102464-49102783	chr15	+	49102512	49102762	True	NM_014335,NM_014985,NM_001194998	chr15,chr15,chr15	+,-,-	EID1,CEP152,CEP152	67527,631,631
chr7:98468310-98468553	chr7	+	98468510	98468602	True	NM_001134450,NM_001134451,NM_152913,NM_003496	chr7,chr7,chr7,chr7	-,-,-,+	TMEM130,TMEM130,TMEM130,TRRAP	-837,-837,-837,7510
chr6:47624392-47625639	chr6	+	47624475	47625667	True	NM_153839,NM_014452	chr6,chr6	+,-	GPR111,TNFRSF21	-212,-346795
chr12:27481884-27483445	chr12	+	27481946	27483035	True	NM_001080406,NM_020183	chr12,chr12	-,+	C12orf71,ARNTL2	-246491,2952
chr17:28807044-28808895	chr17	+	28807600	28808663	True	NM_001007024,NM_001007025,NM_206832,NM_004871	chr17,chr17,chr17,chr17	+,+,-,+	GOSR1,GOSR1,TMIGD1,GOSR1	-3228,-3228,-146535,-3228
chr4:153709097-153710401	chr4	+	153709479	153710205	True	NM_001025595,NM_014447,NM_145720,NM_001025593	chr4,chr4,chr4,chr4	+,+,-,+	ARFIP1,ARFIP1,TIGD4,ARFIP1	-8424,-8424,-8563,-8424
chr3:43364366-43365721	chr3	+	43364634	43365406	True	NM_017719,NM_032806	chr3,chr3	+,-	SNRK,C3orf39	-36682,-217069
chr1:147139543-147139831	chr1	+	147139626	147139815	True	NM_004326,NM_016361	chr1,chr1	+,-	BCL9,ACP6	-126506,2876
chr3:107601096-107602102	chr3	+	107601211	107602077	True	NR_015414,NR_015394,NR_024276	chr3,chr3,chr3	-,+,-	LOC151658,LOC285205,LOC151658	-4296,12,-4296
chrX:153104280-153105653	chrX	+	153104511	153105631	True	NM_032512,NM_006280	chrX,chrX	-,+	PDZD4,SSR4	-8508,-44551
chr14:76447814-76448166	chr14	+	76447848	76448188	True	NM_001102564,NM_052873,NM_003239	chr14,chr14,chr14	+,+,-	C14orf179,C14orf179,TGFB3	3907,3907,-40
chr19:49017856-49018510	chr19	+	49018171	49018468	True	NM_177973,NM_001080434	chr19,chr19	+,-	SULT2B1,LMTK3	36960,-1725
chr4:109549221-109551148	chr4	+	109549251	109551050	True	NM_000995,NM_033625,NR_026968	chr4,chr4,chr4	+,+,-	RPL34,RPL34,LOC285456	-7593,-7566,-7638
chr5:128302175-128303967	chr5	+	128302224	128303402	True	NM_014031,NM_001999,NM_001017372	chr5,chr5,chr5	+,-,+	SLC27A6,FBN2,SLC27A6	-1065,-428489,-1062
chr22:36422032-36423580	chr22	+	36422662	36423630	True	NM_001082579,NM_001082578,NM_001136540	chr22,chr22,chr22	-,-,+	RBFOX2,RBFOX2,APOL1	1012,1012,225486
chr19:42929572-42929853	chr19	+	42929590	42929691	True	NM_001410,NM_005357	chr19,chr19	+,-	MEGF8,LIPE	-99880,1938
chr1:68914507-68915366	chr1	+	68914626	68915332	True	NM_000329,NM_001924	chr1,chr1	-,+	RPE65,GADD45A	360,-763830
chr7:135622735-135623543	chr7	+	135622936	135623578	True	NM_001130929,NM_001128619	chr7,chr7	+,-	PL-5283,LUZP6	-275769,38676
chr2:219847365-219848513	chr2	+	219847377	219848451	True	NR_015390,NM_057093,NM_057094,NM_017521,NR_024385,NM_005209	chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,+,-	LOC151300,CRYBA2,CRYBA2,FEV,LOC151300,CRYBA2	-6422,9726,9726,1978,-6422,9720
chr16:29816389-29816605	chr16	+	29816414	29816654	True	NM_001042539,NM_145239,NM_002383,NM_006319	chr16,chr16,chr16,chr16	+,+,+,-	MAZ,PRRT2,MAZ,CDIPT	1200,6754,1200,57974
chr16:14727833-14728087	chr16	+	14727928	14728072	True	NM_016561,NM_002582,NM_001134477	chr16,chr16,chr16	+,-,-	BFAR,PARN,PARN	-1311,-3804,-3808
chr4:147443238-147443617	chr4	+	147443247	147443659	True	NM_001029998,NM_032128,NM_004575	chr4,chr4,chr4	-,-,+	SLC10A7,SLC10A7,POU4F2	-124,-124,116385
chr16:87417491-87417772	chr16	+	87417576	87417816	True	NM_022818,NM_024735,NR_024568	chr16,chr16,chr16	+,-,-	MAP1LC3B,FBXO31,FBXO31	7984,-182,7942
chr1:117664447-117664719	chr1	+	117664462	117664738	True	NM_001145635,NR_030640,NM_025188	chr1,chr1,chr1	-,+,-	TRIM45,MIR942,TRIM45	-51,-27250,-51
chr9:127270223-127270542	chr9	+	127270291	127270591	True	NM_004959,NM_001161808	chr9,chr9	-,+	NR5A1,GPR144	-592,-56919
chr2:222438445-222438683	chr2	+	222438497	222438686	True	NM_153038,NM_004438	chr2,chr2	+,-	CCDC140,EPHA4	724179,-1487
chr11:125924851-125925476	chr11	+	125924861	125925503	True	NM_016952,NM_013264	chr11,chr11	-,+	CDON,DDX25	7734,-150640
chr1:35222616-35223103	chr1	+	35222650	35223128	True	NM_001164824,NM_153212,NM_005268	chr1,chr1,chr1	-,+,+	C1orf212,GJB4,GJB5	101568,2213,-1987
chr11:64706860-64707113	chr11	+	64706890	64707148	True	NM_006244,NM_130769	chr11,chr11	+,-	PPP2R5B,GPHA2	-14798,-3530
chr10:32393127-32393837	chr10	+	32393210	32393700	True	NM_004521,NM_001026383	chr10,chr10	-,+	KIF5B,CCDC7	-47839,341340
chr8:144512356-144512579	chr8	+	144512475	144512537	True	NM_201589,NM_052924	chr8,chr8	-,+	MAFA,RHPN1	115,-61501
chr7:100967021-100967719	chr7	+	100967116	100967266	True	NM_001130821,NM_001130820,NM_022777,NM_001130822,NM_133457	chr7,chr7,chr7,chr7,chr7	-,-,-,-,+	RABL5,RABL5,RABL5,RABL5,EMID2	-2023,-2023,-2023,-2023,38855
chr15:40530866-40531097	chr15	+	40530913	40531009	True	NM_020168,NM_001039905	chr15,chr15	+,-	PAK6,C15orf56	1025,14151
chr17:33308036-33309520	chr17	+	33308325	33309284	True	NM_006584,NM_013975,NM_002311	chr17,chr17,chr17	-,+,+	CCT6B,LIG3,LIG3	-19797,-859,-859
chr2:219247822-219248317	chr2	+	219247849	219248213	True	NM_022152,NM_000578	chr2,chr2	-,+	TMBIM1,SLC11A1	-90569,-1148
chr16:48279913-48280977	chr16	+	48280149	48281035	True	NM_145186,NM_031490	chr16,chr16	-,+	ABCC11,LONP2	-11061,-1989
chr4:113437391-113437636	chr4	+	113437452	113437652	True	NM_016648,NM_024019	chr4,chr4	+,-	LARP7,NEUROG2	120467,-124
chr2:201359379-201361308	chr2	+	201359475	201361222	True	NM_152387,NM_001160046	chr2,chr2	-,+	KCTD18,SGOL2	13620,29642
chr15:73977411-73977934	chr15	+	73977630	73977938	True	NM_025240,NM_001024736,NM_017455	chr15,chr15,chr15	+,+,-	CD276,CD276,NPTN	-1059,-1059,-51877
chr5:138730988-138731237	chr5	+	138731010	138731224	True	NM_001033112,NM_016459,NM_194296,NM_001161546	chr5,chr5,chr5,chr5	+,-,-,-	PAIP2,MZB1,SPATA24,LOC389333	-52927,-5405,8602,-125
chr1:6577884-6578285	chr1	+	6577892	6578332	True	NM_198681,NM_138697	chr1,chr1	-,+	PLEKHG5,TAS1R1	1787,37005
chr19:35069238-35070009	chr19	+	35069697	35070043	True	NR_027620,NM_001080436	chr19,chr19	-,+	LOC643719,WTIP	-1101,-96868
chr10:30337790-30339426	chr10	+	30337887	30339411	True	NM_020848,NM_005204	chr10,chr10	-,+	KIAA1462,MAP3K8	9129,383454
chr19:49015076-49015290	chr19	+	49015193	49015255	True	NM_177973,NM_001080434	chr19,chr19	+,-	SULT2B1,LMTK3	40173,1241
chr12:128059270-128059621	chr12	+	128059270	128059545	True	NR_033970,NR_033987	chr12,chr12	-,+	LOC440117,FLJ37505	-700034,306616
chr6:74070284-74070752	chr6	+	74070430	74070674	True	NM_001080507,NM_001025290,NM_001017361	chr6,chr6,chr6	-,-,+	OOEP,DPPA5,C6orf221	8891,-6431,1725
chr6:26154119-26155007	chr6	+	26154257	26154913	True	NM_138720,NM_003526,NM_005321,NM_021063	chr6,chr6,chr6,chr6	+,-,+,+	HIST1H2BD,HIST1H2BC,HIST1H1E,HIST1H2BD	3435,-30125,1645,3435
chr7:50623297-50623975	chr7	+	50623360	50623801	True	NM_000790,NM_001082971,NR_033845	chr7,chr7,chr7	-,-,+	DDC,DDC,LOC100129427	5018,9404,-23960
chr1:27701631-27702328	chr1	+	27701985	27702249	True	NM_003665,NM_207397,NM_005281,NM_004672,NM_173452	chr1,chr1,chr1,chr1,chr1	-,-,+,-,-	FCN3,CD164L2,GPR3,MAP3K6,FCN3	-670,7606,16902,-8648,-670
chr3:49591116-49591320	chr3	+	49591139	49591321	True	NM_032316,NM_003458	chr3,chr3	-,+	NICN1,BSN	-124382,600
chr7:107644937-107645185	chr7	+	107644945	107645221	True	NM_002291,NM_000108	chr7,chr7	-,+	LAMB1,DLD	-1141,-113414
chr2:220191964-220192728	chr2	+	220192098	220192654	True	NM_001007089,NM_006736	chr2,chr2	-,+	RESP18,DNAJB2	5295,-48116
chr9:116110505-116111714	chr9	+	116110910	116111576	True	NM_001012361,NM_145241,NM_017688	chr9,chr9,chr9	-,-,+	WDR31,WDR31,BSPRY	-8290,-8290,235
chr5:122182863-122184117	chr5	+	122182886	122184111	True	NM_000943,NM_014035	chr5,chr5	-,+	PPIC,SNX24	188364,-1787
chr6:27356843-27357064	chr6	+	27356848	27356933	True	NM_001076781,NR_024553	chr6,chr6	+,-	ZNF391,ZNF204P	-375,-13695
chr9:133769514-133769872	chr9	+	133769604	133769894	True	NM_005157,NM_198180	chr9,chr9	+,-	ABL1,QRFP	-58831,-379
chr2:238322882-238323338	chr2	+	238322910	238323346	True	NM_001042467,NM_057164,NM_057165,NM_057166,NM_057167,NM_004369	chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-	MLPH,COL6A3,COL6A3,COL6A3,COL6A3,COL6A3	72531,-60,-60,-60,-60,-60
chr9:112812509-112812846	chr9	+	112812523	112812854	True	NM_001012993,NM_001004065,NM_001198656	chr9,chr9,chr9	-,+,+	C9orf152,AKAP2,AKAP2	157609,-1696,-1696
chr2:37891868-37892192	chr2	+	37891867	37892243	True	NM_006449,NM_001170791	chr2,chr2	-,+	CDC42EP3,FAM82A1	7135,260218
chr19:46803210-46803637	chr19	+	46803235	46803635	True	NM_152796,NM_152795,NM_022462,NM_152794,NM_032040	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	HIF3A,HIF3A,HIF3A,HIF3A,CCDC8	-1654,-2984,-1654,3220,113334
chr5:36064176-36064423	chr5	+	36064268	36064443	True	NM_174914,NM_005983,NM_001168316,NR_031764	chr5,chr5,chr5,chr5	-,+,-,-	UGT3A2,SKP2,UGT3A2,UGT3A2	2637,87745,2637,2637
chr1:26143300-26143567	chr1	+	26143311	26143519	True	NM_019557,NR_024498,NM_001099625,NM_001099627,NM_001099626	chr1,chr1,chr1,chr1,chr1	+,-,+,+,+	FAM54B,LOC646471,FAM54B,FAM54B,FAM54B	3164,6628,2877,2877,3799
chr17:6913669-6914868	chr17	+	6913719	6914741	True	NR_030178,NM_174893,NM_001004333,NM_001142798,NM_001142799,NR_037715,NR_037716,NR_037717,NR_029712	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,+,+,+,+,+,+,-	MIR497,C17orf49,RNASEK,C17orf49,C17orf49,RNASEK,RNASEK,RNASEK-C17ORF49,MIR195	6650,3314,994,3314,3314,994,994,994,6329
chr2:152952717-152954144	chr2	+	152953212	152954182	True	NM_000726,NM_001005746,NM_052905,NM_001145798	chr2,chr2,chr2,chr2	-,-,+,-	CACNB4,CACNB4,FMNL2,CACNB4	1461,1103,237568,1461
chr14:73703021-73704066	chr14	+	73703030	73703945	True	NM_021260,NM_173462	chr14,chr14	-,+	ZFYVE1,PAPLN	-209110,259
chr17:45898839-45899103	chr17	+	45898885	45899133	True	NM_145255,NM_145798,NM_033413,NR_037575,NM_148887	chr17,chr17,chr17,chr17,chr17	-,-,+,-,-	MRPL10,OSBPL7,LRRC46,MRPL10,MRPL10	9824,64,9859,9824,9824
chr1:90295252-90296241	chr1	+	90295413	90296239	True	NM_018103,NM_001134479,NR_002830	chr1,chr1,chr1	+,+,-	LRRC8D,LRRC8D,GEMIN8P4	-7992,-8899,164336
chr12:123868917-123869286	chr12	+	123868948	123869202	True	NM_020382,NM_018183	chr12,chr12	+,-	SETD8,SBNO1	-295,-33960
chr1:118149626-118151100	chr1	+	118149914	118151129	True	NM_017686,NM_017709	chr1,chr1	-,+	GDAP2,FAM46C	321223,-1362
chr15:58726162-58726662	chr15	+	58726165	58726662	True	NR_002927,NM_000236	chr15,chr15	-,+	HSP90AB4P,LIPC	258713,-2041
chr19:56158334-56159061	chr19	+	56158381	56159027	True	NM_007279,NM_001012478,NM_016535,NM_016202,NM_013301,NM_001163423,NM_203374,NM_207115	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,+,-,+	U2AF2,U2AF2,ZNF581,ZNF580,CCDC106,ZNF580,ZNF784,ZNF580	6388,6388,-3446,-5014,24,-4969,-22440,-6040
chr18:11982281-11982513	chr18	+	11982286	11982514	True	NM_023075,NM_014214	chr18,chr18	-,+	MPPE1,IMPA2	-73645,-910
chr16:66402365-66403114	chr16	+	66402474	66403092	True	NM_001795,NM_001172643	chr16,chr16	+,-	CDH5,TK2	-2000,181152
chr1:54389450-54390229	chr1	+	54389695	54390238	True	NM_052940,NM_016126	chr1,chr1	+,-	LRRC42,HSPB11	21798,21109
chr3:42128633-42128869	chr3	+	42128705	42128897	True	NM_001042646,NM_017886	chr3,chr3	+,-	TRAK1,ULK4	3848,-125045
chr2:99954628-99955635	chr2	+	99954693	99955378	True	NM_015904,NM_005783	chr2,chr2	+,-	EIF5B,TXNDC9	-910,-1833
chr17:60217675-60217954	chr17	+	60217718	60217838	True	NM_001144933,NM_005121	chr17,chr17	+,-	EFCAB3,MED13	229740,-75075
chr1:236689412-236691126	chr1	+	236689604	236690875	True	NM_201545,NM_201544,NM_201543,NR_034040,NM_006499	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	LGALS8,LGALS8,LGALS8,LOC100287902,LGALS8	-8148,-2635,-2923,-1796,-2923
chr18:20548126-20548846	chr18	+	20548380	20548890	True	NM_032933,NM_203292	chr18,chr18	-,+	C18orf45,RBBP8	469091,-34592
chr12:70646125-70647872	chr12	+	70646304	70647377	True	NR_037615,NM_014515,NM_002837,NM_001199303,NM_001199302	chr12,chr12,chr12,chr12,chr12	+,+,-,+,+	CNOT2,CNOT2,PTPRB,CNOT2,CNOT2	-8861,-9581,356304,-8861,-9545
chr9:99413482-99415229	chr9	+	99413624	99414949	True	NR_026792,NM_153698	chr9,chr9	+,-	LOC441455,C9orf21	73153,2712
chr22:45637493-45638095	chr22	+	45637562	45637962	True	NM_001009880,NM_001167574	chr22,chr22	-,+	KIAA0930,UPK3A	-912,42905
chr4:100482415-100483250	chr4	+	100482414	100482870	True	NM_001134666,NM_001134665,NM_152292,NM_000253	chr4,chr4,chr4,chr4	-,-,-,+	RG9MTD2,RG9MTD2,RG9MTD2,MTTP	2383,2383,2019,2369
chr5:140797824-140798773	chr5	+	140797913	140798781	True	NM_032091,NM_032090,NM_018927,NM_032092,NM_032101,NM_005642,NM_018914,NR_001297,NM_018913	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,-,+,+,+	PCDHGA11,PCDHGA10,PCDHGB7,PCDHGA11,PCDHGB7,TAF7,PCDHGA11,PCDHGB8P,PCDHGA10	1755,-5229,-712,1755,-758,-97562,1755,7071,-5229
chrX:73163374-73164076	chrX	+	73163502	73164108	True	NR_001564,NR_024582	chrX,chrX	-,+	XIST,NCRNA00183	-90914,50
chr2:131443309-131443518	chr2	+	131443441	131443565	True	NR_023391,NM_001079530	chr2,chr2	+,-	C2orf14,CFC1B	-5872,-86190
chr2:131443309-131443518	chr2	-	131193094	131193218	False	NM_032357,NM_014369	chr2,chr2	-,+	CCDC115,PTPN18	-93172,-79565
chr12:21613448-21613905	chr12	+	21613685	21613838	True	NM_002907,NM_024854	chr12,chr12	-,+	RECQL,PYROXD1	40824,-23205
chr4:156628581-156629082	chr4	+	156628580	156628947	True	NM_001130684,NM_017419	chr4,chr4	+,-	GUCY1A3,ACCN5	-39816,158542
chr3:49160429-49160786	chr3	+	49160547	49160825	True	NM_001199161,NM_001199160,NM_001199162,NM_173546,NM_006677,NM_002292	chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,+,-,-	USP19,USP19,USP19,KLHDC8B,USP19,LAMB2	-2176,-2176,-2176,48192,-2176,9824
chr4:103867666-103868972	chr4	+	103867674	103868986	True	NM_001008388,NM_001100874	chr4,chr4	+,-	CISD2,NHEDC1	-77592,71968
chr3:46288815-46289687	chr3	+	46288857	46289711	True	NM_001295,NM_001837,NM_178329,NM_001164680,NM_178328	chr3,chr3,chr3,chr3,chr3	-,+,+,+,+	CCR1,CCR3,CCR3,CCR3,CCR3	-39025,-5037,-5037,-5037,-5037
chr9:132933542-132933781	chr9	+	132933549	132933797	True	NM_014286,NM_015033	chr9,chr9	+,-	NCS1,FNBP1	1059,-128076
chr7:81398818-81400373	chr7	+	81398889	81400390	True	NM_001010934,NM_001010932,NM_001010933,NM_001127444,NM_001010931,NM_000601	chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,+,-,-	HGF,HGF,HGF,CD36,HGF,HGF	37,37,37,-1123186,37,37
chr5:64116011-64117159	chr5	+	64116073	64116462	True	NM_173829,NM_005869	chr5,chr5	-,+	SREK1IP1,CWC27	-51577,-51370
chr16:81272780-81273485	chr16	+	81273052	81273470	True	NM_017429,NM_001076780	chr16,chr16	+,-	BCMO1,PKD1L2	-808,-19077
chr11:93474457-93474722	chr11	+	93474609	93474731	True	NR_003026,NR_002920,NM_024116,NR_031639,NR_002973,NR_003036,NM_014039,NR_002959,NR_003033	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,-,-,+,-,-	SNORA1,SNORA8,TAF1D,MIR1304,SNORA40,SNORD6,C11orf54,SNORA18,SNORD5	-9310,-8944,22,-7679,-6207,-9870,61,-7846,-8143
chr1:213090490-213090994	chr1	+	213090566	213090811	True	NM_001136474,NR_027286	chr1,chr1	+,-	VASH2,NCRNA00292	33075,-59086
chr12:101599001-101600359	chr12	+	101599092	101600368	True	NM_014503,NM_145913	chr12,chr12	+,-	UTP20,SLC5A8	73536,3698
chr1:26348482-26349255	chr1	+	26348500	26349160	True	NM_001004434,NM_004455,NM_000437	chr1,chr1,chr1	-,+,-	SLC30A2,EXTL1,PAFAH2	23494,-280,-23852
chr1:205091767-205092491	chr1	+	205091798	205092426	True	NM_001193273,NM_001193272,NM_005076,NM_005057	chr1,chr1,chr1,chr1	-,-,+,-	RBBP5,RBBP5,CNTN2,RBBP5	-648,-648,-79515,-648
chr10:48185001-48185473	chr10	+	48185344	48185468	True	NM_002900,NR_024495	chr10,chr10	-,+	RBP3,LOC642826	205573,387
chr10:48185001-48185473	chr10	-	48952881	48953005	False	NR_026566,NM_153034,NR_003611	chr10,chr10,chr10	-,+,-	BMS1P1,ZNF488,BMS1P5	-252,-597843,-252
chr10:48185001-48185473	chr10	-	46763218	46763268	False	NR_027632,NR_026566,NR_003611	chr10,chr10,chr10	+,-,-	FAM35B,BMS1P1,BMS1P5	134372,-326,-326
chr10:48185001-48185473	chr10	-	47243881	47244005	False	NR_027634,NR_024495	chr10,chr10	+,-	FAM35B2,LOC642826	135714,-387
chr13:50355015-50356106	chr13	+	50355179	50356145	True	NM_002267,NR_003268	chr13,chr13	-,+	KPNA3,CTAGE10P	10962,108399
chr7:7607112-7609081	chr7	+	7607280	7609038	True	NM_001037763,NM_019005	chr7,chr7	-,+	COL28A1,MIOS	-31820,-717
chr14:21056564-21057455	chr14	+	21056655	21057371	True	NM_001024822,NM_145250,NM_001012975	chr14,chr14,chr14	-,-,+	RNASE12,RNASE11,RNASE10	1663,1098,-78075
chr21:35736994-35738341	chr21	+	35737218	35738294	True	NM_001127670,NM_058182,NM_172201	chr21,chr21,chr21	-,+,+	KCNE1,FAM165B,KCNE2	89819,9454,-953
chrX:115594249-115594742	chrX	+	115594252	115594581	True	NM_007231,NM_001017978	chrX,chrX	+,-	SLC6A14,CXorf61	-26556,-115
chr1:156572025-156572368	chr1	+	156572024	156572220	True	NM_144772,NM_182679,NM_015590	chr1,chr1,chr1	+,-,-	APOA1BP,GPATCH4,GPATCH4	-10517,-745,-745
chrX:24168782-24170343	chrX	+	24168833	24170237	True	NM_030624,NM_003410,NM_001178086,NM_001178095,NM_001178085,NM_001178084	chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,+	KLHL15,ZFX,ZFX,ZFX,ZFX,ZFX	-123530,-1038,-1130,-1130,-1046,-1051
chr5:153569223-153569435	chr5	+	153569267	153569483	True	NM_018691,NM_198321	chr5,chr5	-,+	FAM114A2,GALNT10	-150770,811
chr6:35227996-35228691	chr6	+	35228150	35228682	True	NM_018679,NM_003427	chr6,chr6	-,+	TCP11,ZNF76	-118963,-691
chr3:56501283-56501811	chr3	+	56501301	56501703	True	NM_015576,NM_001012506	chr3,chr3	-,+	ERC2,CCDC66	741,89480
chr17:73629563-73630026	chr17	+	73629651	73630071	True	NR_028439,NM_001162995,NM_004259	chr17,chr17,chr17	+,+,-	LOC643008,LOC643008,RECQL5	2603,-188,33244
chr16:15738867-15740829	chr16	+	15739152	15740128	True	NM_001143979,NM_001184998,NM_014647,NR_030159,NM_001184999,NM_017668	chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,+,-,+	NDE1,KIAA0430,KIAA0430,MIR484,KIAA0430,NDE1	-2087,-2129,-2129,-2060,-2129,3954
chr9:136243740-136244255	chr9	+	136243926	136244219	True	NM_153710,NM_033161	chr9,chr9	+,-	C9orf96,SURF4	-702,-956
chr14:71370632-71372213	chr14	+	71370631	71372191	True	NM_014982,NM_033141	chr14,chr14	+,-	PCNX,MAP3K9	1930,-94743
chr4:25534717-25535879	chr4	+	25534821	25535665	True	NM_015187,NM_001177998	chr4,chr4	-,+	SEL1L3,SLC34A2	328995,121769
chr18:55507297-55507746	chr18	+	55507296	55507526	True	NM_001144967,NM_005603	chr18,chr18	+,-	NEDD4L,ATP8B1	204092,-36969
chr11:118840451-118840915	chr11	+	118840787	118840928	True	NR_003040,NM_181721	chr11,chr11	-,+	RPL23AP64,FOXR1	33426,1488
chr9:137220364-137220579	chr9	+	137220442	137220528	True	NM_002957,NR_023344	chr9,chr9	+,-	RXRA,RNU6ATAC	-2177,-190756
chr14:91580278-91581998	chr14	+	91580532	91581753	True	NM_001102369,NM_001102368,NM_001102367,NM_001102366,NM_024952,NM_182398	chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,+,+,-	C14orf159,C14orf159,C14orf159,C14orf159,C14orf159,RPS6KA5	-226,-226,91,-226,-226,-53539
chr3:57112329-57112681	chr3	+	57112338	57112676	True	NM_181727,NM_001128615	chr3,chr3	+,-	SPATA12,ARHGEF3	-17920,710
chr6:170115585-170115848	chr6	+	170115778	170115882	True	NM_018288,NM_133325,NM_001029863	chr6,chr6,chr6	-,-,+	PHF10,PHF10,C6orf120	8278,8278,-13578
chr17:48611813-48613124	chr17	+	48612154	48613156	True	NM_017957,NM_001267	chr17,chr17	+,-	EPN3,CHAD	-2157,-65927
chr16:21310539-21311207	chr16	+	21310560	21311244	True	NM_001888,NM_001014444,NR_026675	chr16,chr16,chr16	-,-,+	CRYM,CRYM,NCRNA00169	3215,3215,925
chr17:25406962-25407779	chr17	+	25407010	25407476	True	NM_015626,NM_000625	chr17,chr17	+,-	WSB1,NOS2	213629,720139
chr22:35842617-35842878	chr22	+	35842667	35842893	True	NM_005368,NM_006739	chr22,chr22	-,+	MB,MCM5	170541,-46602
chr22:50970464-50970683	chr22	+	50970467	50970701	True	NM_005138,NM_001953,NM_001169111,NM_001169110,NM_001113756,NM_001169109,NM_001113755,NM_001014440,NM_138433	chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,-,-,-,-,+	SCO2,TYMP,SCO2,SCO2,TYMP,SCO2,TYMP,ODF3B,KLHDC7B	-6433,-1953,-6434,-5893,-2209,-5599,-1953,357,15760
chr10:120354868-120355121	chr10	+	120354925	120355163	True	NM_004248,NM_199461	chr10,chr10	-,+	PRLHR,NANOS1	47,434064
chr12:57987834-57988675	chr12	+	57987878	57988407	True	NM_001146259,NM_001146258,NM_024779,NM_001146260,NM_001478	chr12,chr12,chr12,chr12,chr12	+,+,+,+,-	PIP4K2C,PIP4K2C,PIP4K2C,PIP4K2C,B4GALNT1	-2988,-2988,-2988,-2988,38629
chr15:75916079-75916359	chr15	+	75916081	75916223	True	NM_001042588,NM_001042581,NM_153271,NM_005701	chr15,chr15,chr15,chr15	-,-,+,-	SNUPN,SNUPN,SNX33,SNUPN	2562,2289,25124,2289
chr2:91936310-91936755	chr2	+	91936443	91936733	True	NR_003503,NR_027238	chr2,chr2	+,-	GGT8P,LOC654342	26634,-88468
chr11:66359098-66359565	chr11	+	66359106	66359454	True	NM_005125,NM_018219	chr11,chr11	+,-	CCS,CCDC87	1235,1150
chr16:67970863-67972347	chr16	+	67970888	67971703	True	NM_006742,NM_001907,NM_002801,NM_000229	chr16,chr16,chr16,chr16	+,-,-,-	PSKH1,CTRL,PSMB10,LCAT	-43764,-5110,-108,6368
chr11:65637974-65638439	chr11	+	65638177	65638245	True	NR_037718,NM_016938,NM_001335	chr11,chr11,chr11	-,-,+	EFEMP2,EFEMP2,CTSW	2210,2210,9038
chrX:66765136-66765444	chrX	+	66765299	66765365	True	NM_000044,NM_002547	chrX,chrX	+,-	AR,OPHN1	-1476,887984
chrX:113624816-113625404	chrX	+	113624996	113625438	True	NM_000868,NM_000640	chrX,chrX	+,-	HTR2C,IL13RA2	193112,626819
chr10:101998611-101999117	chr10	+	101998786	101999130	True	NM_005063,NR_002954,NM_001278	chr10,chr10,chr10	+,-,-	SCD,SNORA12,CHUK	107641,-1727,-9442
chr7:55799128-55799331	chr7	+	55799179	55799295	True	NM_182633,NR_003949	chr7,chr7	+,-	ZNF713,FKBP9L	181035,-26919
chr1:116932302-116932962	chr1	+	116932351	116933001	True	NM_001160234,NR_024126	chr1,chr1	+,-	ATP1A1,ATP1A1OS	-6410,28230
chrX:46770519-46771772	chrX	+	46770706	46771496	True	NM_032591,NM_001077445,NM_014735	chrX,chrX,chrX	-,+,+	SLC9A7,PHF16,PHF16	-152234,239,371
chr13:51740785-51742116	chr13	+	51740851	51741991	True	NR_003923,NM_145019	chr13,chr13	-,+	GUCY1B2,FAM124A	-100558,54515
chr3:58560623-58562620	chr3	+	58560815	58562384	True	NM_001076778,NM_007177,NM_153331	chr3,chr3,chr3	-,-,+	FAM107A,FAM107A,KCTD6	1158,1158,-76774
chr2:46927132-46927891	chr2	+	46927239	46927909	True	NM_144949,NM_173074,NM_014011	chr2,chr2,chr2	+,-,+	SOCS5,PIGF,SOCS5	-943,-82988,-1193
chr3:132135675-132135972	chr3	+	132135705	132136010	True	NM_032169,NM_015268	chr3,chr3	-,+	ACAD11,DNAJC13	243015,542
chr8:62624837-62626368	chr8	+	62624836	62626207	True	NM_004318,NM_001164756,NM_001164754,NM_001164755,NM_173519,NM_032466	chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,+,-	ASPH,ASPH,ASPH,ASPH,CLVS1,ASPH	1051,1051,1051,1051,-424363,1051
chr20:46038049-46038802	chr20	+	46038216	46038846	True	NM_183048,NR_024594	chr20,chr20	-,+	ZMYND8,LOC100131496	-52742,-91029
chr1:63989177-63989670	chr1	+	63989240	63989646	True	NM_014288,NM_032437	chr1,chr1	-,+	ITGB3BP,EFCAB7	-405,-278
chr14:105955203-105955713	chr14	+	105955248	105955711	True	NM_001311,NM_001519,NM_001198983,NM_001134876,NM_001134877,NM_001134875	chr14,chr14,chr14,chr14,chr14,chr14	+,-,+,+,+,+	CRIP1,BRF1,C14orf80,C14orf80,C14orf80,C14orf80	-2042,-187919,480,1874,808,1874
chr8:64074740-64076652	chr8	+	64075907	64076518	True	NM_152758,NM_000370	chr8,chr8	+,-	YTHDF3,TTPA	4602,-77295
chr2:26568429-26568687	chr2	+	26568430	26568612	True	NM_033505,NM_153835	chr2,chr2	+,-	EPT1,GPR113	341,1123
chr16:2867716-2868124	chr16	+	2867788	2868100	True	NR_026864,NM_144956,NM_006799,NM_144957	chr16,chr16,chr16,chr16	-,+,+,+	PRSS30P,PRSS21,PRSS21,PRSS21	24702,-675,-675,-675
chr12:120966529-120966840	chr12	+	120966623	120966811	True	NM_014868,NM_032314	chr12,chr12	+,-	RNF10,COQ5	5320,203
chrX:64707274-64708044	chrX	+	64707594	64708090	True	NM_001010888,NM_001170649	chrX,chrX	+,-	ZC3H12B,LAS1L	524,46646
chr8:86243980-86245200	chr8	+	86244186	86245211	True	NM_198584,NM_001164830	chr8,chr8	+,-	CA13,CA1	-86533,8785
chr17:63098463-63100259	chr17	+	63098620	63100199	True	NM_006572,NM_001165933	chr17,chr17	-,+	GNA13,RGS9	-45700,33256
chr20:52788181-52789644	chr20	+	52788448	52789620	True	NM_002623,NM_001128915,NM_000782	chr20,chr20,chr20	+,-,-	PFDN4,CYP24A1,CYP24A1	34881,946,946
chr1:20144846-20145289	chr1	+	20144885	20145218	True	NM_015207,NM_019062	chr1,chr1	+,-	OTUD3,RNF186	63669,-3114
chr15:22559965-22561299	chr15	+	22560044	22561256	True	NR_027407,NR_033735	chr15,chr15	-,+	GOLGA8DP,REREP3	154522,-13530
chr6:139456729-139456998	chr6	+	139456866	139456928	True	NM_016217,NM_031922	chr6,chr6	+,-	HECA,REPS1	-668,-147468
chr1:22966287-22967867	chr1	+	22966507	22967834	True	NR_036214,NM_172369,NM_015991,NM_001114101	chr1,chr1,chr1,chr1	-,+,+,+	MIR4253,C1QC,C1QA,C1QC	221936,2283,-3440,2283
chr2:105944953-105945340	chr2	+	105945009	105945381	True	NM_001142621,NM_004257,NM_024093	chr2,chr2,chr2	-,-,+	TGFBRAP1,TGFBRAP1,C2orf49	817,817,8631
chr14:20942753-20943259	chr14	+	20942782	20943246	True	NM_144568,NM_000270	chr14,chr14	-,+	TMEM55B,PNP	-13145,-5295
chr2:79345655-79347472	chr2	+	79345926	79347515	True	NR_002714,NM_002909	chr2,chr2	-,+	REG1P,REG1A	18088,68
chr14:57941901-57943137	chr14	+	57942041	57943127	True	NM_018168,NM_001011713	chr14,chr14	-,+	C14orf105,NAA30	17499,-84832
chr22:50245906-50246236	chr22	+	50246006	50246153	True	NM_014838,NM_014577	chr22,chr22	+,-	ZBED4,BRD1	1343,-27554
chr15:76603318-76603569	chr15	+	76603326	76603436	True	NM_001127716,NM_145805,NM_000126	chr15,chr15,chr15	-,+,-	ETFA,ISL2,ETFA	424,25710,424
chr12:50792435-50793486	chr12	+	50792727	50793055	True	NR_033200,NM_052879,NM_001145475,NM_199190,NM_001170804,NM_001170803,NM_199188,NM_001170808	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,-,+,+,+,+,+	LARP4,LARP4,FAM186A,LARP4,LARP4,LARP4,LARP4,LARP4	1536,1536,-2322,1536,1536,1536,1536,1536
chr5:132940225-132941004	chr5	+	132940425	132941000	True	NM_003202,NM_015082	chr5,chr5	+,-	TCF7,FSTL4	509401,7274
chr17:37615153-37616767	chr17	+	37615690	37616705	True	NM_004774,NM_016507,NM_015083	chr17,chr17,chr17	-,+,+	MED1,CDK12,CDK12	-8163,1033,1033
chr7:129712267-129713293	chr7	+	129712344	129713135	True	NM_016478,NM_014997	chr7,chr7	-,+	ZC3HC1,KLHDC10	-21111,-2059
chr4:78787364-78789001	chr4	+	78787637	78788663	True	NM_020236,NM_144571	chr4,chr4	+,-	MRPL1,CNOT6L	-3883,-47093
chr4:9584639-9585209	chr4	+	9584707	9584955	True	NR_031688,NM_001040448	chr4,chr4	-,+	MIR548I2,DEFB131	-26770,-138498
chr2:192993625-192995622	chr2	+	192993654	192994701	True	NM_001031716,NM_016192	chr2,chr2	+,-	OBFC2A,TMEFF2	-450845,65001
chr17:41322141-41323259	chr17	+	41322240	41323158	True	NM_007300,NM_031858,NM_005899,NM_031862	chr17,chr17,chr17,chr17	-,+,+,+	BRCA1,NBR1,NBR1,NBR1	-44740,4,87,-9
chrX:154493813-154494718	chrX	+	154493860	154494577	True	NM_003372,NM_171998	chrX,chrX	+,-	VBP1,RAB39B	-49210,-8
chr1:210501008-210502112	chr1	+	210501211	210501945	True	NM_001170588,NM_018194,NM_001170580,NM_001170564,NM_001170587,NR_024337,NM_001122834	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-,+	HHAT,HHAT,HHAT,HHAT,HHAT,C1orf133,HHAT	304,304,694,10,304,-93745,10
chr10:5936424-5937704	chr10	+	5936494	5937740	True	NM_019046,NM_001009941,NM_032807,NM_001009943,NM_178150	chr10,chr10,chr10,chr10,chr10	-,-,+,-,+	ANKRD16,ANKRD16,FBXO18,ANKRD16,FBXO18	-4634,-4634,-204,-4634,-4339
chr13:42006265-42007038	chr13	+	42006534	42007045	True	NM_004294,NR_002163	chr13,chr13	-,+	MTRF1,OR7E37P	-168821,9654
chr15:79104521-79105846	chr15	+	79104565	79105401	True	NR_036495,NM_014272,NM_006791	chr15,chr15,chr15	+,-,+	LOC646938,ADAMTS7,MORF4L1	-60237,-792,59770
chr14:88455544-88456483	chr14	+	88455556	88456469	True	NM_001037525,NM_001201402,NM_001201401,NM_000153,NM_003608	chr14,chr14,chr14,chr14,chr14	-,-,-,-,+	GALC,GALC,GALC,GALC,GPR65	3197,3591,3197,3197,14998
chr21:43641144-43641344	chr21	+	43641152	43641340	True	NM_207174,NM_004915,NM_003226,NM_016818,NM_207629	chr21,chr21,chr21,chr21,chr21	+,+,-,+,+	ABCG1,ABCG1,TFF3,ABCG1,ABCG1	-1195,-1936,94416,-1936,-5016
chr12:42869264-42869823	chr12	+	42869340	42869522	True	NM_016488,NM_001144881,NM_001144882,NM_001144883	chr12,chr12,chr12,chr12	+,-,-,-	PPHLN1,PRICKLE1,PRICKLE1,PRICKLE1	-149444,7952,8333,8333
chr3:32432333-32432558	chr3	+	32432433	32432495	True	NM_181472,NM_017801,NM_138410	chr3,chr3,chr3	+,-,+	CMTM7,CMTM6,CMTM7	667,111960,667
chr1:240766295-240767388	chr1	+	240766401	240767427	True	NM_022469,NM_020066	chr1,chr1	-,+	GREM2,FMN2	8085,-511267
chr16:2039023-2039610	chr16	+	2039028	2039428	True	NM_144603,NM_172168,NM_004209,NM_172167,NM_005262	chr16,chr16,chr16,chr16,chr16	-,-,+,-,+	NOXO1,NOXO1,SYNGR3,NOXO1,GFER	-7588,-7844,517,-7844,-4929
chr1:28158270-28159283	chr1	+	28158305	28159220	True	NM_014110,NR_002997,NM_002713,NM_138558,NM_002946	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	PPP1R8,SCARNA1,PPP1R8,PPP1R8,RPA2	-1106,1691,-1033,-1033,82077
chr8:102803303-102804914	chr8	+	102803372	102804816	True	NM_024915,NM_032041	chr8,chr8	+,-	GRHL2,NCALD	-298755,67
chr3:101395997-101396721	chr3	+	101396062	101396721	True	NM_000986,NR_024407,NM_014415	chr3,chr3,chr3	-,+,-	RPL24,LOC100009676,ZBTB11	8892,-839,-74
chr12:12763286-12764496	chr12	+	12763319	12764492	True	NM_001310,NM_030640	chr12,chr12	+,-	CREBL2,DUSP16	338,-47871
chr20:10415727-10415992	chr20	+	10415737	10416035	True	NM_170784,NM_018848,NM_001009608	chr20,chr20,chr20	-,-,+	MKKS,MKKS,C20orf94	-871,-3167,17
chr1:206733477-206733852	chr1	+	206733486	206733688	True	NM_182665,NM_001201478	chr1,chr1	+,-	RASSF5,EIF2D	-3045,52266
chr10:1036382-1037726	chr10	+	1036726	1037380	True	NM_033261,NM_012341	chr10,chr10	-,+	IDI2,GTPBP4	34471,-2429
chr7:27153756-27154843	chr7	+	27153908	27154754	True	NM_030661,NR_002795	chr7,chr7	-,+	HOXA3,HOXA11-AS1	4510,70272
chr14:23240285-23241552	chr14	+	23240323	23241424	True	NM_005015,NM_001126105	chr14,chr14	+,-	OXA1L,SLC7A7	-4643,43699
chr10:98272328-98272588	chr10	+	98272333	98272533	True	NM_004088,NM_012465	chr10,chr10	+,-	DNTT,TLL2	-208299,1200
chr8:61193377-61193578	chr8	+	61193379	61193577	True	NM_004056,NM_002865	chr8,chr8	-,+	CA8,RAB2A	427,235981
chr19:36055557-36056673	chr19	+	36055584	36056688	True	NM_000704,NM_032635	chr19,chr19	-,+	ATP4A,TMEM147	-1024,-19090
chr8:58192594-58192821	chr8	+	58192654	58192868	True	NR_026772,NM_017813	chr8,chr8	+,-	C8orf71,IMPAD1	-603,-286227
chr11:74443675-74444531	chr11	+	74443840	74444580	True	NM_015424,NM_001098638	chr11,chr11	-,+	CHRDL2,RNF169	-1654,15332
chr15:43029641-43030244	chr15	+	43029696	43030069	True	NM_020759,NM_138477	chr15,chr15	+,-	STARD9,CDAN1	-161890,-279
chr9:135231882-135232420	chr9	+	135231897	135232229	True	NM_207417,NM_015046	chr9,chr9	+,-	C9orf171,SETX	53381,-1525
chr1:231114786-231115139	chr1	+	231114790	231115176	True	NM_001122835,NM_022786,NM_024525	chr1,chr1,chr1	-,+,-	TTC13,ARV1,TTC13	-172,-18,-172
chr15:48624015-48624320	chr15	+	48624194	48624292	True	NM_001948,NM_001025248,NM_001025249,NM_016132	chr15,chr15,chr15,chr15	+,+,+,-	DUT,DUT,DUT,MYEF2	72,-624,-624,-153636
chr8:7416734-7416944	chr8	+	7416761	7416837	True	NM_001040705,NM_001136572	chr8,chr8	+,-	DEFB107B,FAM90A7	-63444,447
chr8:7416734-7416944	chr8	+	7409112	7409188	False	NM_001040705,NM_001136572	chr8,chr8	+,-	DEFB107B,FAM90A7	-55795,8096
chr8:7416734-7416944	chr8	+	7424410	7424486	False	NM_001040705,NM_001136572	chr8,chr8	+,-	DEFB107B,FAM90A7	-71093,-7176
chrX:101678860-101679611	chrX	+	101678879	101679645	True	NR_002216,NM_022053	chrX,chrX	+,-	NXF4,NXF2	125247,15260
chrX:101678860-101679611	chrX	-	101517430	101518159	False	NM_001012978,NM_022053	chrX,chrX	-,+	BEX5,NXF2	-106444,-15312
chr22:39435727-39436285	chr22	+	39436102	39436298	True	NM_145298,NM_001006666,NM_175709	chr22,chr22,chr22	+,+,-	APOBEC3F,APOBEC3F,CBX7	374,374,112290
chr1:226016633-226017018	chr1	+	226016710	226017066	True	NM_000120,NM_014698	chr1,chr1	+,-	EPHX1,TMEM63A	-3759,53404
chr1:153281395-153282188	chr1	+	153281405	153281981	True	NM_052891,NM_002965	chr1,chr1	-,+	PGLYRP3,S100A9	1263,48348
chr5:137513959-137514380	chr5	+	137513963	137514267	True	NM_005733,NM_139199,NM_001164326,NM_006696	chr5,chr5,chr5,chr5	+,-,-,-	KIF20A,BRD8,BRD8,BRD8	149,141,141,141
chr1:109584736-109584986	chr1	+	109584736	109584802	True	NM_001142550,NM_001142551,NM_014969,NM_020141	chr1,chr1,chr1,chr1	-,-,-,+	WDR47,WDR47,WDR47,TMEM167B	98,98,98,48600
chr22:41815144-41816994	chr22	+	41815545	41815871	True	NM_016272,NM_003216	chr22,chr22	-,+	TOB2,TEF	27206,-37634
chr2:88125134-88125347	chr2	+	88125140	88125394	True	NM_001078170,NM_001032392	chr2,chr2	-,+	RGPD2,PLGLB1	-18,-77581
chr2:88125134-88125347	chr2	-	108443358	108443413	False	NM_182588,NR_024439	chr2,chr2	+,-	RGPD4,LOC729121	-26,-775
chr2:88125134-88125347	chr2	+	88260796	88260858	False	NM_198274,NM_001024457	chr2,chr2	+,-	SMYD1,RGPD1	106440,24501
chr2:88125134-88125347	chr2	-	87140826	87141080	False	NM_001078170,NM_004931,NM_001024457	chr2,chr2,chr2	+,-,+	RGPD2,CD8B,RGPD1	18,-51779,3657
chr2:88125134-88125347	chr2	-	87169213	87169467	False	NM_001032392,NM_001024457	chr2,chr2	-,+	PLGLB1,RGPD1	79552,-24526
chr1:216894667-216896647	chr1	+	216894763	216896667	True	NM_001438,NR_024099,NM_138796	chr1,chr1,chr1	-,-,+	ESRRG,ESRRG,SPATA17	190,178,908027
chr16:4908819-4909252	chr16	+	4908839	4909241	True	NM_016936,NM_032569	chr16,chr16	+,-	UBN1,GLYR1	-6815,-11536
chr17:39620628-39620975	chr17	+	39620676	39620976	True	NM_030975,NM_002278	chr17,chr17	+,-	KRTAP9-9,KRT32	-209091,2712
chr16:56484401-56484927	chr16	+	56484519	56484810	True	NM_018233,NM_007006	chr16,chr16	+,-	OGFOD1,NUDT21	613,502
chr11:124628550-124628847	chr11	+	124628605	124628817	True	NM_138961,NM_006176,NM_014312	chr11,chr11,chr11	-,+,-	ESAM,NRGN,VSIG2	3456,-18827,-6496
chr1:86046644-86046921	chr1	+	86046664	86046867	True	NM_001554,NM_001134445	chr1,chr1	+,-	CYR61,DDAH1	-271,-2618
chr13:96746994-96747798	chr13	+	96747037	96747766	True	NM_153456,NM_020121	chr13,chr13	+,-	HS6ST3,UGGT2	-4003,-41301
chr4:75024151-75025514	chr4	+	75024356	75025553	True	NM_002089,NM_001144978	chr4,chr4	-,+	CXCL2,MTHFD2L	-59359,-585
chr3:44770531-44770971	chr3	+	44770678	44771010	True	NM_145044,NM_020696	chr3,chr3	+,-	ZNF501,KIAA1143	113,32213
chr8:124428126-124428638	chr8	+	124428250	124428594	True	NM_018024,NM_014109	chr8,chr8	+,-	WDYHV1,ATAD2	370,-19545
chr4:155507507-155507741	chr4	+	155507511	155507789	True	NM_021871,NM_005141,NM_000508	chr4,chr4,chr4	-,+,-	FGA,FGB,FGA	4158,-23430,4158
chr15:44489321-44489734	chr15	+	44489412	44489591	True	NM_032892,NM_138423	chr15,chr15	-,+	FRMD5,CASC4	-1983,91317
chrX:150151619-150151943	chrX	+	150151641	150151875	True	NM_005342,NM_134446	chrX,chrX	+,-	HMGB3,CD99L2	-13,-84352
chr20:58633750-58634020	chr20	+	58633836	58634028	True	NM_173644,NM_006242	chr20,chr20	+,-	C20orf197,PPP1R3D	-2908,-118484
chr11:124501231-124502629	chr11	+	124501350	124502435	True	NM_032811,NR_016021,NM_170601	chr11,chr11,chr11	+,+,-	TBRG1,TBRG1,SIAE	-8660,-8660,41399
chr3:83268212-83269015	chr3	+	83268252	83268672	True	NM_001167674,NM_000158	chr3,chr3	+,-	CADM2,GBE1	1739460,-1457302
chr8:144638870-144639184	chr8	+	144638948	144639137	True	NM_024736,NM_015117,NM_001166237	chr8,chr8,chr8	+,-,+	GSDMD,ZC3H3,GSDMD	1339,-15328,-3442
chr5:137143130-137144513	chr5	+	137143513	137144265	True	NM_006805,NR_002713	chr5,chr5	-,+	HNRNPA0,NPY6R	-53474,-6683
chr13:99292921-99293506	chr13	+	99293058	99293542	True	NM_001032296,NR_036129	chr13,chr13	-,+	STK24,MIR3170	-63662,-432331
chr17:34494331-34494747	chr17	+	34494393	34494463	True	NM_001001417,NM_001001435	chr17,chr17	-,+	TBC1D3B,CCL4L1	9575,44004
chr17:34494331-34494747	chr17	-	36293492	36293580	False	NM_032258,NR_024178,NM_001123391	chr17,chr17,chr17	+,-,+	TBC1D3F,LOC284100,TBC1D3	-9601,-49129,-9601
chr17:34494331-34494747	chr17	+	36339045	36339133	False	NM_032258,NM_001123391	chr17,chr17	-,-	TBC1D3F,TBC1D3	9601,9601
chr17:34494331-34494747	chr17	+	34582419	34582507	False	NM_207007,NM_001001418	chr17,chr17	+,-	CCL4L2,TBC1D3C	-44020,9588
chr17:34494331-34494747	chr17	+	34747453	34747523	False	NM_001123392,NM_004773	chr17,chr17	-,+	TBC1D3H,ZNHIT3	9577,94949
chr17:34494331-34494747	chr17	+	34798504	34798574	False	NM_001040282,NM_004773,NM_001001418	chr17,chr17,chr17	-,+,-	TBC1D3G,ZNHIT3,TBC1D3C	9579,43898,9567
chr19:18531389-18532334	chr19	+	18531732	18532302	True	NM_032627,NM_001170939,NM_001009998	chr19,chr19,chr19	+,-,+	SSBP4,ISYNA1,SSBP4	-1637,16669,-1637
chr2:207139290-207139495	chr2	+	207139357	207139437	True	NM_020923,NM_005279	chr2,chr2	+,-	ZDBF2,GPR1	85,-56586
chr4:57523587-57524297	chr4	+	57523592	57524173	True	NM_139211,NM_001145459,NM_206919	chr4,chr4,chr4	-,-,+	HOPX,HOPX,ARL9	-904,-904,-152270
chr18:22930569-22931054	chr18	+	22930865	22930975	True	NM_015461,NM_001025096	chr18,chr18	-,+	ZNF521,PSMA8	1289,782840
chr22:21214035-21214501	chr22	+	21214050	21214365	True	NM_004782,NM_058004	chr22,chr22	+,-	SNAP29,PI4KA	-809,-980
chr19:3186019-3186222	chr19	+	3186053	3186199	True	NM_003775,NM_198969,NM_020170	chr19,chr19,chr19	+,-,+	S1PR4,AES,NCLN	-7368,-123089,-229
chr11:124791326-124792408	chr11	+	124791460	124792238	True	NM_152722,NM_001037558	chr11,chr11	-,+	HEPACAM,HEPN1	14120,-2365
chr1:155826064-155826704	chr1	+	155826318	155826697	True	NM_001037533,NM_032292,NM_152280	chr1,chr1,chr1	-,-,+	GON4L,GON4L,SYT11	325,325,2562
chr1:3371809-3373063	chr1	+	3372140	3373044	True	NR_030277,NM_014448	chr1,chr1	-,+	MIR551A,ARHGEF16	104360,-1044
chr8:11352431-11352997	chr8	+	11352454	11353026	True	NM_001715,NM_053279	chr8,chr8	+,-	BLK,FAM167A	-984,-28178
chr13:45992723-45992931	chr13	+	45992723	45992957	True	NM_001204476,NM_001010875	chr13,chr13	+,-	COG3,SLC25A30	46072,-207
chr3:49158578-49159421	chr3	+	49158671	49159359	True	NM_001199161,NM_001199160,NM_001199162,NM_173546,NM_006677	chr3,chr3,chr3,chr3,chr3	-,-,-,+,-	USP19,USP19,USP19,KLHDC8B,USP19	-300,-300,-300,49658,-300
chr14:74771318-74772631	chr14	+	74771595	74772673	True	NR_003256,NM_018228,NM_005050	chr14,chr14,chr14	-,+,-	ABCD4,VRTN,ABCD4	-1828,42492,-1828
chr14:36264870-36266151	chr14	+	36265216	36265836	True	NM_014990,NM_032352	chr14,chr14	-,+	RALGAPA1,BRMS1L	12647,29760
chr3:141726930-141728273	chr3	+	141726953	141727998	True	NM_001178140,NM_001679	chr3,chr3	-,+	TFDP2,ATP1B3	-7724,-131542
chrX:1711067-1711302	chrY	+	1661139	1661333	False	NM_005088,NR_027383,NM_004043,NM_178129	chrY,chrY,chrY,chrY	+,+,+,-	AKAP17A,AKAP17A,ASMT,P2RY8	-704,-704,3014,-55102
chrX:1711067-1711302	chrX	+	1711139	1711333	True	NM_005088,NR_027383,NM_004043,NM_178129	chrX,chrX,chrX,chrX	+,+,+,-	AKAP17A,AKAP17A,ASMT,P2RY8	-704,-704,3014,-55102
chr12:125813492-125814291	chr12	+	125813495	125814267	True	NM_032656,NM_052907	chr12,chr12	-,+	DHX37,TMEM132B	-339828,-2384
chr15:43559751-43560163	chr15	+	43559760	43560207	True	NM_201631,NM_001012969,NM_004245	chr15,chr15,chr15	-,+,-	TGM5,ADAL,TGM5	-705,62664,-705
chr1:157802028-157803126	chr1	+	157802049	157802899	True	NM_005894,NM_018240	chr1,chr1	-,+	CD5L,KIRREL	8785,160163
chr6:44264931-44265136	chr6	+	44264956	44265036	True	NM_001137560,NM_182539	chr6,chr6	+,-	TMEM151B,TCTE1	-26527,472
chr22:40767233-40767741	chr22	+	40767338	40767600	True	NM_020831,NM_015705	chr22,chr22	-,+	MKL1,SGSM3	265146,-794
chr1:21978606-21978813	chr1	+	21978701	21978767	True	NM_001177520,NM_001145658	chr1,chr1	+,-	ALPL,RAP1GAP	-142894,-353
chr1:43889911-43890433	chr1	+	43889980	43890330	True	NM_001190880,NM_015284	chr1,chr1	-,+	HYI,KIAA0467	29380,-1234
chr19:58237612-58238340	chr19	+	58237726	58238330	True	NM_173632,NM_024833	chr19,chr19	+,-	ZNF776,ZNF671	19833,715
chr1:31655064-31655294	chr1	+	31655184	31655262	True	NM_024522,NM_016505	chr1,chr1	-,+	NKAIN1,ZCCHC17	57522,114579
chr9:5526591-5527919	chr9	+	5526961	5527830	True	NM_025239,NM_018465	chr9,chr9	+,-	PDCD1LG2,C9orf46	-16475,-89101
chr1:76539640-76540289	chr1	+	76539883	76540251	True	NM_001160011,NM_152996,NR_026546	chr1,chr1,chr1	+,+,-	ST6GALNAC3,ST6GALNAC3,ASB17	137,137,-141767
chr9:34398731-34399808	chr9	+	34398902	34399770	True	NM_012144,NM_032596	chr9,chr9	+,-	DNAI1,C9orf24	59040,-1053
chr8:27164245-27165079	chr8	+	27164297	27165079	True	NM_173174,NM_171982	chr8,chr8	+,-	PTK2B,TRIM35	3919,3805
chr3:151985916-151986260	chr3	+	151985956	151986268	True	NR_027038,NM_207292,NR_027037,NM_021038	chr3,chr3,chr3,chr3	-,+,-,+	LOC401093,MBNL1,LOC401093,MBNL1	1197,-187,1197,-187
chr1:220097894-220098595	chr1	+	220097895	220098524	True	NM_018060,NM_018713	chr1,chr1	+,-	IARS2,SLC30A10	168930,3526
chr11:18015945-18016977	chr11	+	18016077	18016975	True	NM_012139,NM_054031	chr11,chr11	-,+	SERGEF,MRGPRX3	17712,125526
chr11:18746262-18747146	chr11	+	18746261	18746696	True	NM_153347,NM_173588	chr11,chr11	+,-	TMEM86A,IGSF22	-25962,1131
chr15:86219781-86220103	chr15	+	86219806	86220140	True	NR_031682,NM_144767	chr15,chr15	-,+	MIR1276,AKAP13	93719,127
chr20:16554252-16554825	chr20	+	16554308	16554663	True	NM_001199865,NM_001199866,NM_024704,NM_003092	chr20,chr20,chr20,chr20	-,-,-,+	KIF16B,KIF16B,KIF16B,SNRPB2	-229,-229,-229,155945
chr9:43623783-43624712	chr9	+	43624438	43624498	True	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	6282,60386
chr2:201371661-201372903	chr2	+	201371669	201372744	True	NM_152387,NM_001160046	chr2,chr2	-,+	KCTD18,SGOL2	2098,18120
chr2:106050992-106052133	chr2	+	106051060	106052018	True	NM_024093,NM_201557	chr2,chr2	+,-	C2orf49,FHL2	-97106,3264
chr15:25463042-25463280	chr15	+	25463041	25463247	True	NR_003315,NR_003358,NR_003495,NR_003496,NR_003497,NR_022010,NR_003344,NR_003345,NR_003351,NR_003314,NM_130838,NR_003342,NR_003343,NR_003303,NR_003346	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,+,-,+,+,+,+	SNORD115-23,SNORD115-43,SNORD115-24,HBII-52-27,HBII-52-28,PAR4,SNORD115-29,SNORD115-30,SNORD115-36,SNORD115-22,UBE3A,SNORD115-25,SNORD115-26,SNORD115-11,SNORD115-31	-6149,5145,-4286,2402,4253,-6253,5145,7102,5145,-8027,187456,-2404,516,5145,9008
chr1:32110101-32110444	chr1	+	32110235	32110347	True	NR_033688,NR_033686,NM_001525,NM_012392	chr1,chr1,chr1,chr1	-,-,+,-	PEF1,PEF1,HCRTR1,PEF1	-17,541,-26985,541
chr11:47372094-47372495	chr11	+	47372223	47372421	True	NM_000256,NM_001128225	chr11,chr11	-,+	MYBPC3,SLC39A13	1882,57624
chr9:130616291-130616496	chr9	+	130616300	130616438	True	NM_000118,NM_001114753,NM_001018078	chr9,chr9,chr9	-,-,+	ENG,ENG,FPGS	659,659,-50843
chr11:75110859-75111076	chr11	+	75110862	75111014	True	NM_001005,NM_001039548,NR_000005,NR_000025	chr11,chr11,chr11,chr11	+,-,+,+	RPS3,KLHL35,SNORD15A,SNORD15B	-351,30710,420,4450
chr20:46010872-46011124	chr20	+	46011045	46011133	True	NM_183048,NR_024594	chr20,chr20	-,+	ZMYND8,LOC100131496	-25571,-63857
chr10:135160617-135160850	chr10	+	135160616	135160896	True	NM_001145201,NM_015722,NM_145202	chr10,chr10,chr10	+,-,+	PRAP1,CALY,PRAP1	-53,-10141,-53
chr1:111677515-111679450	chr1	+	111677577	111679304	True	NM_178454,NM_006090,NM_001007794	chr1,chr1,chr1	-,+,+	DRAM2,CEPT1,CEPT1	3598,3528,2944
chr9:112969865-112970514	chr9	+	112969957	112970545	True	NM_001136562,NM_001012993	chr9,chr9	+,-	AKAP2,C9orf152	-82228,50
chr17:7834691-7835020	chr17	+	7834839	7834899	True	NM_053051,NR_030697,NM_001166621,NR_030684,NM_004732,NM_001037144,NM_021210	chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,-,-,+,-	CNTROB,TRAPPC1,TRAPPC1,TRAPPC1,KCNAB3,CNTROB,TRAPPC1	573,468,468,418,-2086,573,418
chr11:66609523-66610435	chr11	+	66609677	66610341	True	NM_001032279,NM_005133,NM_022172	chr11,chr11,chr11	+,+,-	RCE1,RCE1,PC	541,541,65049
chr5:175341902-175342175	chr5	+	175341911	175342186	True	NM_032361,NM_001008220	chr5,chr5	-,+	THOC3,CPLX2	53420,-43470
chr6:88851769-88853766	chr6	+	88851790	88853655	True	NM_033181,NM_030960,NM_001160260	chr6,chr6,chr6	-,+,-	CNR1,SPACA1,CNR1	1451,-94335,7277
chr11:50259065-50259853	chr11	+	50259475	50259870	True	NR_024504,NR_003034	chr11,chr11	+,-	LOC646813,LOC441601	108447,-1842
chr20:439496-441049	chr20	+	439726	440781	True	NM_144628,NM_031229	chr20,chr20	-,+	TBC1D20,RBCK1	2467,-51068
chr19:29372549-29372856	chr19	+	29372554	29372852	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	83185,331342
chr2:97508374-97508676	chr2	+	97508524	97508660	True	NM_144994,NM_199078	chr2,chr2	-,+	ANKRD23,CNNM3	1148,-26584
chr20:47446635-47448045	chr20	+	47447044	47447988	True	NM_006420,NM_020820	chr20,chr20	+,-	ARFGEF2,PREX1	90286,-2624
chr11:65364069-65364545	chr11	+	65364072	65364470	True	NM_032223,NM_033347,NM_005714,NM_033348,NM_033455	chr11,chr11,chr11,chr11,chr11	+,-,-,-,-	PCNXL3,KCNK7,KCNK7,KCNK7,KCNK7	19312,-605,-605,-605,-605
chr1:42919290-42920465	chr1	+	42919326	42920338	True	NM_032257,NM_001077447,NM_001146192,NM_024664	chr1,chr1,chr1,chr1	-,+,-,+	ZMYND12,PPCS,ZMYND12,PPCS	1656,1834,1656,1834
chr10:81203856-81204183	chr10	+	81203957	81204201	True	NM_001099692,NM_153367	chr10,chr10	+,-	EIF5AL1,ZCCHC24	68155,1232
chr10:76858826-76859068	chr10	+	76858869	76859052	True	NM_016364,NM_001007272,NM_001007271,NM_001007273,NM_001174156	chr10,chr10,chr10,chr10,chr10	-,-,-,-,+	DUSP13,DUSP13,DUSP13,DUSP13,SAMD8	247,9969,9969,9969,12340
chr8:144975725-144976308	chr8	+	144975894	144976110	True	NM_000837,NM_031308	chr8,chr8	+,-	GRINA,EPPK1	88115,-28460
chr2:202211283-202212610	chr2	+	202211341	202212494	True	NM_139163,NM_001127391,NM_033356	chr2,chr2,chr2	-,-,+	ALS2CR12,ALS2CR12,CASP8	9657,9657,-86169
chr19:2718977-2719703	chr19	+	2719110	2719334	True	NM_145173,NM_003249	chr19,chr19	-,+	DIRAS1,THOP1	2106,66171
chr10:129925248-129926881	chr10	+	129925528	129926668	True	NM_130435,NM_002417,NM_001145966	chr10,chr10,chr10	+,-,-	PTPRE,MKI67,MKI67	-79766,-1060,-1060
chr19:3584005-3584317	chr19	+	3584097	3584235	True	NM_001060,NM_133261	chr19,chr19	-,+	TBXA2R,GIPC3	22646,1333
chr5:177021299-177021581	chr5	+	177021413	177021619	True	NR_024019,NM_017510,NM_007255	chr5,chr5,chr5	-,+,+	FAM193B,TMED9,B4GALT7	-39865,-2251,5499
chr1:35546395-35546811	chr1	+	35546398	35546860	True	NM_024772,NM_007167	chr1,chr1	+,-	ZMYM1,ZMYM6	-1477,-48829
chr2:225266874-225268184	chr2	+	225266878	225268088	True	NM_022915,NM_001122779,NM_024785	chr2,chr2,chr2	+,-,-	MRPL44,FAM124B,FAM124B	-444815,-167,-167
chr10:105251761-105252012	chr10	+	105251796	105251944	True	NM_001129742,NM_004210	chr10,chr10	-,+	CALHM3,NEURL	-12799,1790
chr1:21057716-21058011	chr1	+	21057946	21058006	True	NM_001103160,NM_001103161,NM_032409	chr1,chr1,chr1	-,-,+	SH2D5,SH2D5,PINK1	1177,1177,-98049
chr11:118549231-118549968	chr11	+	118549384	118549905	True	NM_001144759,NM_007180	chr11,chr11	+,-	PHLDB1,TREH	-71129,527
chr11:118549231-118549968	chr11	+	118562286	118562336	False	NM_001144759,NM_007180	chr11,chr11	+,-	PHLDB1,TREH	-84031,-11905
chr8:18664505-18666206	chr8	+	18664781	18666218	True	NM_000015,NM_206909	chr8,chr8	+,-	NAT2,PSD3	-416077,246
chr1:38061523-38062850	chr1	+	38061685	38062752	True	NM_013285,NM_003462	chr1,chr1	-,+	GNL2,DNALI1	-99,-39216
chr1:36689296-36689698	chr1	+	36689321	36689693	True	NM_014408,NM_005119	chr1,chr1	-,+	TRAPPC3,THRAP3	-74254,323
chr5:142784695-142784969	chr5	+	142784699	142784893	True	NM_001024094,NM_001204261,NM_001204260,NM_001204263,NM_001204262,NM_001204265,NM_001204264,NM_000176,NM_021182,NM_001204258,NM_001204259,NM_001018076,NM_001020825	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,-,-,-,-,+,-,-,-,-	NR3C1,NR3C1,NR3C1,NR3C1,NR3C1,NR3C1,NR3C1,NR3C1,HMHB1,NR3C1,NR3C1,NR3C1,NR3C1	-1445,-1445,-1445,-1445,-1445,-1445,-1445,-1445,406832,-1445,-1445,-654,-1445
chr17:33881650-33882258	chr17	+	33881686	33882019	True	NR_003037,NM_001129820	chr17,chr17	+,-	SNORD7,SLFN14	18656,3150
chr11:26353798-26355122	chr11	+	26353812	26354729	True	NM_031418,NM_001135091	chr11,chr11	+,-	ANO3,MUC15	-185,239148
chr4:54237046-54237508	chr4	+	54237214	54237508	True	NM_001134938,NM_001134937,NM_030917,NM_152540	chr4,chr4,chr4,chr4	+,+,+,-	FIP1L1,FIP1L1,FIP1L1,SCFD2	6311,6311,6311,-4972
chr4:47465260-47465519	chr4	+	47465298	47465364	True	NM_020453,NM_017845	chr4,chr4	+,-	ATP10D,COMMD8	22045,362
chr8:144417956-144418379	chr8	+	144417991	144418329	True	NM_052963,NM_052924	chr8,chr8	-,+	TOP1MT,RHPN1	-941,32695
chr18:61138764-61139689	chr18	+	61138787	61139658	True	NM_004869,NM_002639	chr18,chr18	-,+	VPS4B,SERPINB5	-49035,4485
chr12:45693355-45694122	chr12	+	45693674	45693878	True	NM_001142678,NR_037144	chr12,chr12	+,-	ANO6,PLEKHA8P1	-7265,-83885
chrX:70147380-70148832	chrX	+	70147494	70148826	True	NM_001048164,NM_032803,NM_001170931	chrX,chrX,chrX	-,-,+	SLC7A3,SLC7A3,FOXO4	2199,2199,167172
chr2:178922743-178924066	chr2	+	178922908	178923966	True	NM_016953,NM_152945	chr2,chr2	-,+	PDE11A,RBM45	13566,53215
chr17:28269857-28271732	chr17	+	28270212	28271597	True	NM_198529,NR_026738,NM_033389	chr17,chr17,chr17	+,+,-	EFCAB5,EFCAB5,SSH2	-1650,-1650,-13194
chr10:75320344-75320582	chr10	+	75320446	75320586	True	NM_152586,NM_004922	chr10,chr10	-,+	USP54,SEC24C	14897,183544
chr19:45456633-45457454	chr19	+	45456783	45457329	True	NM_001199468,NM_001294,NM_000483,NM_145288	chr19,chr19,chr19,chr19	+,+,+,-	CLPTM1,CLPTM1,APOC2,ZNF296	1269,1269,-7595,122411
chr9:89767382-89768067	chr9	+	89767450	89767797	True	NR_036691,NM_001001709	chr9,chr9	-,+	LOC494127,C9orf170	-67310,-3953
chr1:206519506-206520853	chr1	+	206519514	206520049	True	NM_001042758,NM_015326,NM_001007544,NM_001170637	chr1,chr1,chr1,chr1	+,+,-,+	SRGAP2,SRGAP2,C1orf186,SRGAP2	-3365,-3365,-230867,-3365
chr1:206519506-206520853	chr1	+	144056819	144057354	False	NM_207418,NR_034178	chr1,chr1	-,+	FAM72D,SRGAP2P2	-143676,-141122
chr1:204042935-204043438	chr1	+	204042938	204043266	True	NM_005686,NR_027902	chr1,chr1	+,-	SOX13,C1orf157	-743,-32546
chr1:6759279-6761196	chr1	+	6759452	6761124	True	NM_018198,NM_138350	chr1,chr1	-,+	DNAJC11,THAP3	892,-74300
chr1:44447091-44447505	chr1	+	44447176	44447546	True	NM_001005417,NM_003780,NM_004047,NM_152499,NM_001039457,NM_006934	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-	B4GALT2,B4GALT2,ATP6V0B,CCDC24,ATP6V0B,SLC6A9	-1044,-2361,-6625,9733,-6625,35501
chr14:69727973-69728207	chr14	+	69728075	69728197	True	NM_003861,NM_020692,NM_001168368	chr14,chr14,chr14	-,+,+	DCAF5,GALNTL1,GALNTL1	-108161,-1445,-1445
chr2:175350247-175351363	chr2	+	175350595	175351309	True	NM_001033045,NM_152529,NM_024583	chr2,chr2,chr2	-,-,+	GPR155,GPR155,SCRN3	552,552,-90189
chr1:59011602-59011823	chr1	+	59011612	59011811	True	NR_034014,NM_145243	chr1,chr1	+,-	LOC100131060,OMA1	239011,692
chr10:52382590-52382963	chr10	+	52382589	52383010	True	NM_147156,NM_001079516	chr10,chr10	-,+	SGMS1,ASAH2B	777,116697
chr5:25415862-25417376	chr5	+	25415867	25417358	True	NR_037896,NM_020227	chr5,chr5	-,+	LOC340107,PRDM9	-575175,-1908194
chr15:35414359-35414950	chr15	+	35414466	35414927	True	NM_014106,NR_003144	chr15,chr15	-,+	ZNF770,LOC723972	-133969,114599
chr4:174554973-174555523	chr4	+	174555002	174555448	True	NR_003679,NM_006792	chr4,chr4	+,-	NBLA00301,MORF4	-103444,-17208
chr1:11794289-11795145	chr1	+	11794487	11795048	True	NM_001040195,NM_001040194,NM_001040197,NM_001040196,NM_020350,NM_001127325	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-	AGTRAP,AGTRAP,AGTRAP,AGTRAP,AGTRAP,MAD2L2	1093,1093,1093,1093,1093,-42809
chr5:137668409-137669663	chr5	+	137668778	137669488	True	NM_001135647,NM_001790,NM_022809,NM_016605	chr5,chr5,chr5,chr5	+,-,-,+	FAM53C,CDC25C,CDC25C,FAM53C	3735,-1262,-1262,4215
chr10:51356298-51357768	chr10	+	51356305	51357168	True	NR_029388,NM_002443	chr10,chr10	-,+	LOC728407,MSMB	14205,192384
chr10:51356298-51357768	chr10	+	51135481	51135606	False	NM_001077686,NM_182554	chr10,chr10	-,+	AGAP8,C10orf53	110986,-247848
chr10:51356298-51357768	chr10	-	51637590	51638453	False	NM_001145262,NM_006327	chr10,chr10	+,-	NCOA4,TIMM23	-61363,-14254
chr12:120552190-120553953	chr12	+	120552233	120553983	True	NM_006861,NM_207311,NM_001167606	chr12,chr12,chr12	-,+,-	RAB35,CCDC64,RAB35	710,-124636,710
chr6:107779547-107780350	chr6	+	107779661	107780294	True	NM_018013,NM_020381	chr6,chr6	+,-	SOBP,PDSS2	31022,535
chr3:118952305-118953010	chr3	+	118952336	118952968	True	NM_212543,NM_003778,NM_020754,NM_006952	chr3,chr3,chr3,chr3	-,-,+,+	B4GALT4,B4GALT4,ARHGAP31,UPK1B	6844,6844,60251,-59962
chr8:7340466-7342317	chr8	+	7340514	7341314	True	NM_080389,NM_001040702,NM_001040703,NM_001040704,NM_152250,NM_152251	chr8,chr8,chr8,chr8,chr8,chr8	-,-,+,-,+,-	DEFB104A,DEFB104B,DEFB105B,DEFB106B,DEFB105A,DEFB106A	-7910,-7910,3928,2657,3928,2657
chr8:7340466-7342317	chr8	-	7685368	7686086	False	NM_080389,NM_001040702,NM_001040703,NM_001040704,NM_152250,NM_152251	chr8,chr8,chr8,chr8,chr8,chr8	+,+,-,+,-,+	DEFB104A,DEFB104B,DEFB105B,DEFB106B,DEFB105A,DEFB106A	7906,7906,-4008,-2725,-4008,-2725
chr4:80244897-80246439	chr4	+	80245797	80246367	True	NM_032693,NR_026555	chr4,chr4	-,+	NAA11,GDEP	854,502257
chr1:15257238-15258416	chr1	+	15257289	15258386	True	NM_001018000,NM_001018001,NR_027136	chr1,chr1,chr1	+,+,-	KAZN,KAZN,C1orf126	-6715,-1044,220624
chr2:110652357-110654034	chr2	+	110652367	110653951	True	NR_036225,NR_038099,NR_027467,NM_001205288,NR_027145,NM_033514	chr2,chr2,chr2,chr2,chr2,chr2	-,+,+,+,+,+	MIR4267,LOC100288695,LIMS3,LOC100288695,LIMS3-LOC440895,LIMS3	173718,2057,2057,2057,2057,2057
chr2:110652357-110654034	chr2	+	109268037	109268094	False	NM_001193485,NM_022336	chr2,chr2	+,-	LIMS1,EDAR	3172,337791
chr2:110652357-110654034	chr2	-	111232709	111234293	False	NR_037626,NR_038099,NR_027467,NM_001205288,NR_027145,NM_033514	chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-	LOC100507334,LOC100288695,LIMS3,LOC100288695,LIMS3-LOC440895,LIMS3	-229545,-2057,-2057,-2057,-2057,-2057
chr9:100617689-100617997	chr9	+	100617692	100617928	True	NM_004473,NM_016481	chr9,chr9	+,-	FOXE1,C9orf156	-2206,66974
chr1:54484534-54484749	chr1	+	54484577	54484773	True	NM_001010978,NM_153035	chr1,chr1	-,+	LDLRAD1,TCEANC2	-774,34500
chr5:25910058-25910408	chr5	+	25910148	25910350	True	NR_037896,NM_020227	chr5,chr5	-,+	LOC340107,PRDM9	-1069456,-2402475
chr11:72852761-72852987	chr11	+	72852888	72852948	True	NM_014824,NM_002564	chr11,chr11	-,+	FCHSD2,P2RY2	245,76395
chr1:155004233-155004628	chr1	+	155004252	155004402	True	NM_152494,NM_144622,NM_001143687	chr1,chr1,chr1	+,-,+	DCST1,DCST2,DCST1	1879,1905,1879
chr12:7245265-7245489	chr12	+	7245280	7245530	True	NR_026947,NM_001733	chr12,chr12	+,-	LOC283314,C1R	15373,-237
chrX:100305953-100306332	chrX	+	100306082	100306368	True	NM_021637,NM_024917,NM_001167972,NM_001167971,NM_001167970	chrX,chrX,chrX,chrX,chrX	+,-,-,-,-	TMEM35,TRMT2B,TRMT2B,TRMT2B,TRMT2B	27467,787,787,787,787
chr19:46000314-46001078	chr19	+	46000640	46000868	True	NM_003370,NM_005619,NM_001080401,NM_206900,NM_206901	chr19,chr19,chr19,chr19,chr19	+,-,+,-,-	VASP,RTN2,PPM1N,RTN2,RTN2	9819,-329,862,-327,-4166
chr4:9637275-9638855	chr4	+	9637293	9638428	True	NR_031688,NM_000798	chr4,chr4	-,+	MIR548I2,DRD5	-79356,144829
chr11:118133306-118133771	chr11	+	118133313	118133819	True	NM_144765,NM_000733,NM_005797	chr11,chr11,chr11	-,+,-	MPZL2,CD3E,MPZL2	1482,41475,1482
chr9:33450032-33451312	chr9	+	33450128	33451131	True	NM_004925,NM_002504	chr9,chr9	-,+	AQP3,NFX1	-2538,-159765
chr19:59070618-59071049	chr19	+	59070648	59071086	True	NM_198426,NR_027334,NM_003969,NM_014453	chr19,chr19,chr19,chr19	-,+,-,-	CHMP2A,LOC100131691,UBE2M,CHMP2A	-4293,-146,-305,-4162
chr2:47401550-47402270	chr2	+	47401757	47402216	True	NM_001743,NM_002354	chr2,chr2	-,+	CALM2,EPCAM	1574,194070
chr9:88968660-88969006	chr9	+	88968711	88968915	True	NM_001185059,NM_001185074,NM_024617,NM_024635	chr9,chr9,chr9,chr9	-,-,-,+	ZCCHC6,ZCCHC6,ZCCHC6,NAA35	537,537,537,-412705
chr9:127954880-127955387	chr9	+	127955103	127955373	True	NM_005833,NM_001123355,NM_002721,NM_001123369,NM_001174153,NM_001174152	chr9,chr9,chr9,chr9,chr9,chr9	+,-,-,-,+,+	RABEPK,PPP6C,PPP6C,PPP6C,RABEPK,RABEPK	7488,-2885,-2885,-2885,7447,7447
chr8:145135461-145136980	chr8	+	145135552	145136608	True	NM_019037,NM_017570,NM_003801	chr8,chr8,chr8	+,-,+	EXOSC4,OPLAH,GPAA1	-2081,-19968,915
chr8:6695673-6697200	chr8	+	6695995	6696883	True	NM_207411,NM_018361	chr8,chr8	-,+	XKR5,AGPAT5	-2829,-130172
chr22:39238358-39238754	chr22	+	39238357	39238773	True	NM_014293,NM_145699	chr22,chr22	-,+	NPTXR,APOBEC3A	1294,114753
chr20:16729073-16729552	chr20	+	16729085	16729432	True	NM_001199866,NM_020157	chr20,chr20	-,+	KIF16B,OTOR	-175006,-133
chr5:177210415-177210625	chr5	+	177210440	177210504	True	NR_003615,NM_173663	chr5,chr5	+,-	LOC728554,FAM153A	91757,-2935
chr5:177210415-177210625	chr5	-	175487586	175487650	False	NM_032361,NM_001079529	chr5,chr5	-,+	THOC3,FAM153B	-92041,24258
chr5:177210415-177210625	chr5	-	177433300	177433364	False	NM_006261,NM_001079527	chr5,chr5	-,+	PROP1,FAM153C	-10057,2324
chr7:2560125-2560764	chr7	+	2560225	2560578	True	NM_002304,NM_001040167,NM_001040168,NM_001166355,NM_152743	chr7,chr7,chr7,chr7,chr7	+,+,+,+,-	LFNG,LFNG,LFNG,LFNG,BRAT1	-2779,-797,-797,-8113,34865
chrX:130196441-130198295	chrX	+	130196443	130198262	True	NM_144967,NM_182314	chrX,chrX	+,-	ARHGAP36,ENOX2	-4278,-159235
chr11:133709412-133711115	chr11	+	133709682	133710995	True	NM_174927,NR_027276	chr11,chr11	-,+	SPATA19,LOC100128239	4456,191171
chr15:41957859-41958367	chr15	+	41957923	41958366	True	NM_001080541,NM_015540,NM_001164273	chr15,chr15,chr15	+,-,+	MGA,RPAP1,MGA	-5367,-121459,-5367
chr1:247242074-247242278	chr1	+	247242161	247242263	True	NM_173858,NR_037894,NM_001204220,NM_033213	chr1,chr1,chr1,chr1	+,-,-,-	VN1R5,ZNF670-ZNF695,ZNF670,ZNF670	177110,-46,-46,-46
chr1:148557312-148558888	chr1	+	148557756	148558569	True	NM_001164262,NM_173638,NM_001170755	chr1,chr1,chr1	-,+,+	PPIAL4F,NBPF15,NBPF15	-355220,2277,40
chr1:148557312-148558888	chr1	+	144595531	144595812	False	NM_001037675,NR_003242	chr1,chr1	+,-	NBPF9,C1orf152	19146,16974
chr19:4516960-4517496	chr19	+	4517121	4517473	True	NM_032631,NM_001080400	chr19,chr19	+,-	HDGFRP2,PLIN4	-44917,293
chr18:72056632-72057178	chr18	+	72056668	72057214	True	NM_001044369,NM_001174123	chr18,chr18	-,+	FAM69C,DKFZP781G0119	67339,-73609
chr19:46319495-46319905	chr19	+	46319500	46319850	True	NM_030785,NM_004497	chr19,chr19	-,+	RSPH6A,FOXA3	-895,47667
chr7:91776090-91776471	chr7	+	91776248	91776384	True	NM_001146152,NM_019004	chr7,chr7	-,+	CYP51A1,ANKIB1	-12189,99163
chr6:160683687-160683927	chr6	+	160683694	160683968	True	NM_003058,NM_021977	chr6,chr6	-,+	SLC22A2,SLC22A3	-3731,85456
chr5:178489448-178491404	chr5	+	178489472	178491106	True	NM_014594,NM_000843	chr5,chr5	+,-	ZNF354C,GRM6	-1916,-67348
chr2:159827239-159828705	chr2	+	159827239	159828726	True	NM_152528,NM_001145909,NM_033394	chr2,chr2,chr2	-,+,+	WDSUB1,TANC1,TANC1	314388,-2153,-2153
chrX:36079290-36081031	chrX	+	36079469	36081075	True	NM_173695,NM_031442	chrX,chrX	+,-	CXorf59,TMEM47	-14482,-1404064
chr16:2245176-2245511	chr16	+	2245189	2245507	True	NM_001199175,NM_020764,NM_001199173,NM_022372	chr16,chr16,chr16,chr16	+,-,+,+	MLST8,CASKIN1,MLST8,MLST8	9670,1008,9670,9670
chr4:72074070-72075701	chr4	+	72074469	72075676	True	NM_002092,NM_001134742	chr4,chr4	-,+	GRSF1,SLC4A4	-368842,-21522
chr11:27744208-27744494	chr11	+	27744308	27744541	True	NM_170731,NR_033315,NM_170732,NM_001143805,NM_001143807,NM_001143806	chr11,chr11,chr11,chr11,chr11,chr11	-,+,-,-,-,-	BDNF,BDNF-AS1,BDNF,BDNF,BDNF,BDNF	-703,-215960,-1982,-1982,-3014,-1982
chr19:52932082-52932344	chr19	+	52932162	52932322	True	NM_001143939,NM_001143938,NM_001105549	chr19,chr19,chr19	+,+,-	ZNF534,ZNF534,ZNF83	2344,2344,209372
chr12:99049273-99049652	chr12	+	99049336	99049569	True	NM_181869,NM_153687	chr12,chr12	+,-	APAF1,IKBIP	-10309,-10747
chr1:223744676-223744953	chr1	+	223744695	223744906	True	NM_001146068,NM_001143962	chr1,chr1	+,-	CAPN2,CAPN8	144388,108580
chr1:223744676-223744953	chr9	+	138944191	138944263	False	NM_015597,NM_144653	chr9,chr9	+,-	GPSM1,NACC2	277668,42918
chr11:18270339-18270546	chr11	+	18270340	18270572	True	NM_001127380,NM_001199744,NM_030754,NM_000331	chr11,chr11,chr11,chr11	-,-,-,+	SAA2,SAA2-SAA4,SAA2,SAA1	-119,-119,-119,17235
chr20:25999601-26001360	chr20	+	25999604	26001196	True	NR_004846,NR_003678	chr20,chr20	+,-	LOC100134868,C20orf191	-9220,93532
chr20:25999601-26001360	chr20	-	25815983	25817575	False	NR_004846,NR_026714	chr20,chr20	+,-	LOC100134868,FAM182B	172859,-34056
chr4:26584493-26585589	chr4	+	26584552	26585582	True	NM_018317,NM_000730	chr4,chr4	+,-	TBC1D19,CCKAR	-37,-92510
chr1:145473293-145473584	chr1	+	145473328	145473588	True	NM_001039888,NM_032305,NM_153713	chr1,chr1,chr1	+,-,+	ANKRD34A,POLR3GL,LIX1L	-2871,-2941,3496
chr7:98247131-98247483	chr7	+	98247152	98247528	True	NM_002523,NM_018842	chr7,chr7	+,-	NPTX2,BAIAP2L1	-606,-216725
chr6:108584142-108585660	chr6	+	108584667	108585480	True	NM_145315,NM_152827,NM_003795	chr6,chr6,chr6	+,-,-	LACE1,SNX3,SNX3	30617,-2203,-2203
chr7:68526321-68527763	chr7	+	68526323	68527594	True	NM_001127231,NR_022007	chr7,chr7	+,-	AUTS2,PMS2P4	536310,-1758917
chr9:85044489-85045568	chr9	+	85044577	85045403	True	NM_152573,NM_001001670	chr9,chr9	-,+	RASEF,FAM75D1	632690,-440955
chr9:85044489-85045568	chr9	-	94869266	94869325	False	NR_015444,NM_006415,NM_178324	chr9,chr9,chr9	+,-,-	LOC100128076,SPTLC1,SPTLC1	25790,8424,8424
chr6:35425271-35426038	chr6	+	35425431	35426037	True	NM_003214,NM_021922	chr6,chr6	-,+	TEAD3,FANCE	38874,-5344
chr1:155561847-155562435	chr1	+	155561861	155562220	True	NM_018116,NM_018489	chr1,chr1	+,-	MSTO1,ASH1L	17786,-29537
chr15:65811974-65813041	chr15	+	65812000	65812447	True	NM_130434,NM_017743,NM_197961,NM_197960,NM_016395	chr15,chr15,chr15,chr15,chr15	-,-,-,-,+	DPP8,DPP8,DPP8,DPP8,PTPLAD1	-1965,-1965,-1965,-2391,10379
chr1:159913401-159914189	chr1	+	159913422	159914119	True	NM_001135050,NM_033438,NM_001146173,NM_020125,NM_001146172,NM_020789	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,-	IGSF9,SLAMF9,SLAMF9,SLAMF8,SLAMF9,IGSF9	1317,9975,9975,-116994,9975,1317
chr13:52172835-52173336	chr13	+	52172835	52173037	True	NM_052950,NM_001039938	chr13,chr13	+,-	WDFY2,INTS6	-14407,-145560
chr1:53481594-53481993	chr1	+	53481785	53482011	True	NM_018281,NM_001007100,NM_001007099,NM_001007250	chr1,chr1,chr1,chr1	-,+,+,+	ECHDC2,SCP2,SCP2,SCP2	-94339,-1237,-1237,-1237
chr13:52028522-52029838	chr13	+	52028748	52029616	True	NM_001039937,NM_012141,NM_001101320,NM_001039938	chr13,chr13,chr13,chr13	-,-,+,-	INTS6,INTS6,SERPINE3,INTS6	-1473,-1473,-113631,-1473
chr19:10813962-10814488	chr19	+	10814027	10814219	True	NM_031209,NR_024333	chr19,chr19	+,-	QTRT1,LOC147727	-1966,-49479
chr11:76472620-76473257	chr11	+	76472657	76473295	True	NM_015516,NR_024042	chr11,chr11	+,-	TSKU,GUCY2E	20989,-39824
chr15:56689658-56691363	chr15	+	56690324	56691054	True	NM_018365,NM_198524	chr15,chr15	-,+	MNS1,TEX9	66339,-32741
chr12:110438721-110439335	chr12	+	110438889	110439227	True	NM_057169,NM_014776,NM_033121,NM_057170,NM_001135213,NM_139201,NM_001135214	chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,-,+,-,-,-,-	GIT2,GIT2,ANKRD13A,GIT2,GIT2,GIT2,GIT2	-4695,-4695,-1706,-4695,-4695,-4695,-4695
chr7:142656009-142657477	chr7	+	142656268	142657432	True	NM_000420,NM_178829	chr7,chr7	-,+	KEL,C7orf34	2121,-19716
chr5:156589871-156591456	chr5	+	156589919	156591505	True	NM_130899,NM_005546	chr5,chr5	-,+	FAM71B,ITK	1824,16401
chr1:28844355-28844591	chr1	+	28844374	28844540	True	NM_001269,NM_001048195,NM_001048194,NR_003077	chr1,chr1,chr1,chr1	+,+,+,-	RCC1,RCC1,RCC1,SNORD99	204,204,204,60844
chr20:2845781-2847111	chr20	+	2845869	2846929	True	NM_002836,NM_022760,NM_080840	chr20,chr20,chr20	+,-,+	PTPRA,FAM113A,PTPRA	-1079,-24537,7212
chr15:71040852-71041585	chr15	+	71040863	71041530	True	NM_018003,NM_001199017	chr15,chr15	-,+	UACA,LRRC49	14380,143397
chr17:26663085-26663319	chr17	+	26663100	26663310	True	NM_174887,NM_021137	chr17,chr17	-,+	IFT20,TNFAIP1	-605,-603
chr10:69333283-69334497	chr10	+	69333353	69334251	True	NM_001127384,NM_012238	chr10,chr10	-,+	CTNNA3,SIRT1	91222,310175
chr10:75634773-75634983	chr10	+	75634828	75635001	True	NM_001222,NM_172171,NM_172170,NM_172173,NM_001204492,NM_001145031,NM_172169	chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,-,+,-	CAMK2G,CAMK2G,CAMK2G,CAMK2G,CAMK2G,PLAU,CAMK2G	-479,-479,-479,-479,-479,35860,-479
chr3:51423472-51423735	chr3	+	51423471	51423749	True	NM_001171904,NM_006010,NM_013286	chr3,chr3,chr3	-,+,+	VPRBP,MANF,RBM15B	110319,-830,4949
chr5:140731655-140732000	chr5	+	140731773	140732015	True	NM_032095,NM_018923,NM_032096,NM_018922,NM_005642,NM_032053,NM_032011,NM_018916,NM_018917	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,-,+,+,+,+	PCDHGB1,PCDHGB2,PCDHGB2,PCDHGB1,TAF7,PCDHGA4,PCDHGA3,PCDHGA3,PCDHGA4	-1996,7687,7687,-1996,-31422,2752,-8223,-8223,2752
chr1:179711638-179711963	chr1	+	179711637	179711947	True	NM_173509,NM_001199260	chr1,chr1	+,-	FAM163A,TOR1AIP2	350,135044
chr20:57615438-57616487	chr20	+	57615451	57616473	True	NR_037930,NR_037929,NM_006886,NM_016045,NM_001001977,NM_030773	chr20,chr20,chr20,chr20,chr20,chr20	-,-,-,-,-,+	SLMO2-ATP5E,SLMO2-ATP5E,ATP5E,SLMO2,ATP5E,TUBB1	1478,1478,-8051,1478,-8029,-21193
chr1:248010071-248011829	chr1	+	248010517	248011591	True	NM_015431,NM_001001959	chr1,chr1	+,-	TRIM58,OR11L1	8909,-5319
chr10:17500967-17502055	chr10	+	17501046	17501806	True	NM_001004470,NR_034129	chr10,chr10	-,+	ST8SIA6,LOC100128098	-4792,-72170
chr11:44992898-44994597	chr11	+	44992919	44994345	True	NM_006034,NR_026681	chr11,chr11	-,+	TP53I11,LOC221122	-20311,1107
chr16:29087487-29088749	chr16	+	29087633	29088768	True	NM_024816,NR_003369	chr16,chr16	-,+	RABEP2,RRN3P2	-151101,-1524
chr16:29087487-29088749	chr16	-	21829291	21830425	False	NM_170664,NR_003370	chr16,chr16	+,-	OTOA,RRN3P1	-113061,123
chr2:106808932-106809521	chr2	+	106809097	106809511	True	NM_025076,NM_032411	chr2,chr2	-,+	UXS1,C2orf40	1334,-127035
chr10:75936538-75936954	chr10	+	75936623	75936933	True	NM_001123,NM_001202449,NM_207012	chr10,chr10,chr10	+,+,-	ADK,ADK,AP3M1	-427,-427,-25797
chr2:901901-903187	chr2	+	902071	903218	True	NM_018968,NR_033880	chr2,chr2	+,-	SNTG2,LOC339822	43335,-37959
chr1:78354210-78354423	chr1	+	78354226	78354442	True	NM_144573,NM_003902,NM_001172309	chr1,chr1,chr1	+,-,+	NEXN,FUBP1,NEXN	-77,90385,-77
chr2:150202122-150203305	chr2	+	150202354	150203178	True	NM_015702,NM_194317	chr2,chr2	-,+	MMADHC,LYPD6	241209,-15376
chr8:7976627-7977825	chr8	+	7976645	7977609	True	NR_031689,NR_024362	chr8,chr8	-,+	MIR548I3,FLJ10661	-30034,108482
chr8:7976627-7977825	chr8	-	7024916	7025881	False	NR_027000,NM_001164452	chr8,chr8	-,+	LOC349196,FAM90A14	95183,88544
chr22:45681785-45682596	chr22	+	45681932	45682620	True	NM_006953,NM_001009880,NM_001167574	chr22,chr22,chr22	+,-,+	UPK3A,KIAA0930,UPK3A	-1115,-45282,-1115
chr10:13391208-13391569	chr10	+	13391273	13391596	True	NM_001195604,NM_012247,NM_001195602,NM_182751	chr10,chr10,chr10,chr10	-,-,-,+	SEPHS1,SEPHS1,SEPHS1,MCM10	-975,-975,-975,-187778
chr3:129725496-129726530	chr3	+	129725500	129726560	True	NM_007117,NR_024252	chr3,chr3	+,-	TRH,LOC729375	-32437,103766
chr4:168155492-168155725	chr4	+	168155558	168155720	True	NM_001204359,NM_001204358,NM_001204355,NM_001204354,NM_001204357,NM_001204356,NM_001204353,NM_001204352,NM_001040159,NM_016950,NM_007193	chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4	-,-,-,-,-,-,-,-,-,-,+	SPOCK3,SPOCK3,SPOCK3,SPOCK3,SPOCK3,SPOCK3,SPOCK3,SPOCK3,SPOCK3,SPOCK3,ANXA10	71,71,71,71,71,71,3,71,71,71,857967
chr6:15082408-15083872	chr6	+	15082844	15083920	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	162606,579419
chr1:214449800-214451251	chr1	+	214450150	214451156	True	NM_020197,NM_005401	chr1,chr1	+,-	SMYD2,PTPN14	3408,273918
chr5:140472675-140474255	chr5	+	140473490	140474289	True	NM_018936,NM_018937,NM_031947	chr5,chr5,chr5	+,+,-	PCDHB2,PCDHB3,SLC25A2	-53,5944,209373
chr6:111197741-111198652	chr6	+	111197877	111198653	True	NM_001634,NM_001033059,NM_015076	chr6,chr6,chr6	+,+,-	AMD1,AMD1,CDK19	-1943,-1942,-61465
chr5:150223735-150224988	chr5	+	150223762	150224650	True	NM_001172831,NM_001145805	chr5,chr5	-,+	ZNF300,IRGM	59945,1434
chr19:42296829-42297829	chr19	+	42296883	42297770	True	NM_173506,NM_001815	chr19,chr19	-,+	LYPD4,CEACAM3	50796,2763
chr2:179728681-179729139	chr2	+	179728684	179729182	True	NM_019091,NM_133379	chr2,chr2	+,-	PLEKHA3,TTN	-383536,-56534
chr6:35763861-35764633	chr6	+	35763983	35764383	True	NM_182548,NM_001832	chr6,chr6	+,-	LHFPL5,CLPS	8687,769
chrX:115590112-115592028	chrX	+	115590576	115592076	True	NM_007231,NM_001017978	chrX,chrX	+,-	SLC6A14,CXorf61	-22890,2111
chr1:224621214-224621562	chr1	+	224621355	224621465	True	NM_001115113,NM_014184,NM_025160	chr1,chr1,chr1	-,+,-	WDR26,CNIH4,WDR26	586,-76811,586
chr17:76339370-76339838	chr17	+	76339464	76339855	True	NM_003955,NM_024419	chr17,chr17	-,+	SOCS3,PGS1	16353,34879
chr10:70482601-70482969	chr10	+	70482695	70482841	True	NM_018237,NM_152707	chr10,chr10	+,-	CCAR1,SLC25A16	-1788,-195415
chrX:50542895-50543454	chrX	+	50542901	50543467	True	NM_020717,NR_003933	chrX,chrX	-,+	SHROOM4,LOC347376	13627,104964
chr20:19866029-19866741	chr20	+	19866352	19866765	True	NM_016652,NM_018993	chr20,chr20	-,+	CRNKL1,RIN2	169975,3444
chr11:18434719-18435083	chr11	+	18434917	18434983	True	NM_017448,NM_181508,NM_002301	chr11,chr11,chr11	+,-,+	LDHC,HPS5,LDHC	-1115,-91196,-1115
chr2:112654242-112655585	chr2	+	112654244	112655361	True	NM_022662,NM_006343	chr2,chr2	-,+	ANAPC1,MERTK	-12503,829
chrX:80376662-80377247	chrX	+	80376678	80377252	True	NM_030763,NM_003022	chrX,chrX	-,+	HMGN5,SH3BGRL	80239,80050
chr3:195538526-195539031	chr3	+	195538583	195539037	True	NM_018406,NM_138297,NM_001098516,NM_004532	chr3,chr3,chr3,chr3	-,-,+,-	MUC4,MUC4,MUC20,MUC4	161,161,-87536,161
chr21:36411326-36412790	chr21	+	36411352	36412653	True	NR_024351,NR_026812,NM_001754	chr21,chr21,chr21	+,-,-	NCRNA00160,C21orf96,RUNX1	-315300,237,8999
chr19:41255965-41256316	chr19	+	41255970	41256218	True	NM_198476,NM_004596	chr19,chr19	-,+	C19orf54,SNRPA	-142,540
chr1:248017919-248018419	chr1	+	248018251	248018439	True	NM_015431,NM_001001959	chr1,chr1	+,-	TRIM58,OR11L1	2061,-13053
chr1:86620381-86621929	chr1	+	86620639	86621865	True	NM_152890,NM_006536	chr1,chr1	-,+	COL24A1,CLCA2	306,267903
chr15:90439414-90440571	chr15	+	90439529	90440446	True	NR_023361,NM_005829,NM_198526,NR_037582	chr15,chr15,chr15,chr15	-,-,+,-	AP3S2,AP3S2,ZNF710,AP3S2	-1912,-1912,104305,-1912
chr2:44223594-44224065	chr2	+	44223593	44223903	True	NM_022437,NM_133259	chr2,chr2	+,-	ABCG8,LRPPRC	-157541,-449
chr1:201126512-201127744	chr1	+	201126770	201127692	True	NM_001164586,NM_016456	chr1,chr1	+,-	IGFN1,TMEM9	32260,-3138
chr15:80262461-80263130	chr15	+	80262634	80263135	True	NM_001114735,NR_028330,NM_004049	chr15,chr15,chr15	-,+,-	BCL2A1,C15orf37,BCL2A1	563,-47586,563
chr11:65595723-65597557	chr11	+	65596018	65597298	True	NM_005507,NM_152760	chr11,chr11	-,+	CFL1,SNX32	28556,4111
chr17:47073500-47073808	chr17	+	47073502	47073826	True	NM_004123,NM_006546,NM_001160423	chr17,chr17,chr17	-,+,+	GIP,IGF2BP1,IGF2BP1	-27547,947,947
chr4:186319270-186319887	chr4	+	186319530	186319809	True	NM_181726,NM_018409	chr4,chr4	+,-	ANKRD37,LRP2BP	-1752,-19378
chr7:28344542-28346270	chr7	+	28344663	28346073	True	NM_182899,NM_175061	chr7,chr7	+,-	CREB5,JAZF1	-5774,-124226
chr15:42658521-42659323	chr15	+	42658638	42659370	True	NM_173087,NM_000070,NM_024344,NM_022473	chr15,chr15,chr15,chr15	+,+,+,-	CAPN3,CAPN3,CAPN3,ZFP106	-6999,-6999,-6999,90410
chr7:35060614-35062512	chr7	+	35060878	35062288	True	NM_015283,NM_207173	chr7,chr7	-,+	DPY19L1,NPSR1	15424,-363042
chr5:179162980-179163682	chr5	+	179163003	179163603	True	NM_014757,NM_001164444	chr5,chr5	+,-	MAML1,CBY3	-3204,-55028
chr12:48397031-48397904	chr12	+	48397239	48397887	True	NM_024056,NM_033150,NM_001844	chr12,chr12,chr12	+,-,-	TMEM106C,COL2A1,COL2A1	-39960,448,448
chr1:32704462-32704995	chr1	+	32704628	32704919	True	NM_032648,NR_026850	chr1,chr1	+,-	FAM167B,MTMR9LP	7898,2443
chr8:118532344-118532895	chr8	+	118532560	118532868	True	NM_080651,NM_000127	chr8,chr8	+,-	MED30,EXT1	96,591240
chr1:180198897-180199112	chr1	+	180198938	180199080	True	NR_037642,NM_033343	chr1,chr1	-,+	LOC100527964,LHX4	44786,352
chr18:72345349-72345978	chr18	+	72345357	72345885	True	NM_017757,NR_024484,NM_001146190,NM_001146189	chr18,chr18,chr18,chr18	+,-,+,+	ZNF407,LOC400657,ZNF407,ZNF407	-2492,-80286,-2492,-2492
chr14:21421015-21421403	chr14	+	21421016	21421226	True	NM_002934,NM_201538	chr14,chr14	+,-	RNASE2,NDRG2	2403,72096
chr19:39262603-39262856	chr19	+	39262680	39262766	True	NM_002307,NM_001042507	chr19,chr19	-,+	LGALS7,LGALS7B	1447,17083
chr19:39262603-39262856	chr19	-	39281232	39281296	False	NM_002307,NM_001042507	chr19,chr19	-,+	LGALS7,LGALS7B	-17075,-1439
chr22:31503497-31503812	chr22	+	31503505	31503779	True	NM_080430,NM_001002837	chr22,chr22	-,+	SELM,INPP5J	46,15181
chr11:61517436-61518994	chr11	+	61517875	61518947	True	NR_026882,NM_001127392,NM_013279	chr11,chr11,chr11	-,+,+	DKFZP434K028,C11orf9,C11orf9	6239,1173,3913
chr19:45584636-45584975	chr19	+	45584731	45584874	True	NM_145288,NM_001007269,NM_024707,NM_001007270	chr19,chr19,chr19,chr19	-,+,+,+	ZNF296,GEMIN7,GEMIN7,GEMIN7	-5043,-2258,-2258,-2270
chr10:44285207-44285791	chr10	+	44285207	44285589	True	NR_033923,NR_002726	chr10,chr10	+,-	C10orf136,HNRNPA3P1	55164,326
chr6:168843491-168844404	chr6	+	168843499	168844427	True	NM_214462,NM_001166412,NM_022138	chr6,chr6,chr6	-,+,+	DACT2,SMOC2,SMOC2	-123097,-1719,-1719
chr17:77813910-77814134	chr17	+	77813915	77814183	True	NM_005189,NM_003655	chr17,chr17	+,-	CBX2,CBX4	-61989,-702
chr5:140808719-140810346	chr5	+	140809381	140810367	True	NM_032091,NM_003735,NM_032092,NM_032094,NM_005642,NM_018914,NR_001297	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,-,+,+	PCDHGA11,PCDHGA12,PCDHGA11,PCDHGA12,TAF7,PCDHGA11,PCDHGB8P	-8897,-18,-8897,-18,-109030,-8897,-3581
chr19:50465465-50466351	chr19	+	50465979	50466128	True	NM_001135163,NM_052884,NR_002825	chr19,chr19,chr19	-,-,+	SIGLEC11,SIGLEC11,SIGLEC16	-1550,-1550,6783
chr22:24316940-24317237	chr22	+	24317068	24317258	True	NM_001084393,NM_001355,NM_000854,NM_001084392	chr22,chr22,chr22,chr22	+,-,+,-	DDTL,DDT,GSTT2,DDT	-8100,4811,5055,-388
chr22:24316940-24317237	chr22	-	24372555	24372665	False	NM_001144931,NM_000853	chr22,chr22	+,-	LOC391322,GSTT1	451,11670
chr22:24316940-24317237	chr22	-	24308447	24308631	False	NM_000854,NM_001080843,NM_001084393,NM_001084392	chr22,chr22,chr22,chr22	-,-,+,-	GSTT2,GSTT2B,DDTL,DDT	-5054,-5079,394,8100
chrX:100855092-100855743	chrX	+	100855095	100855655	True	NM_001009584,NM_016607	chrX,chrX	-,+	ARMCX6,ARMCX3	17386,22464
chrX:100855092-100855743	chrX	-	100868101	100868661	False	NM_019007,NM_001009584,NM_001184768,NR_033670,NM_016607,NM_177948,NM_177947,NR_033669	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,+,+,+,-	ARMCX6,ARMCX6,ARMCX6,ARMCX6,ARMCX3,ARMCX3,ARMCX3,ARMCX6	4380,4380,4380,4380,9458,9689,9458,4380
chr3:123682255-123682722	chr3	+	123682434	123682672	True	NR_028136,NM_022757	chr3,chr3	+,-	KALRN,CCDC14	130885,-2179
chr4:30721751-30722214	chr4	+	30721778	30722196	True	NM_002589,NM_000730,NM_032457,NM_001173523,NM_032456	chr4,chr4,chr4,chr4,chr4	+,-,+,+,+	PCDH7,CCKAR,PCDH7,PCDH7,PCDH7	-60,-4229736,-60,-60,-67
chr1:167053973-167054978	chr1	+	167054001	167054951	True	NM_005814,NM_001080426	chr1,chr1	-,+	GPA33,DUSP27	4967,9135
chr8:50823259-50823546	chr8	+	50823369	50823587	True	NM_003068,NM_018967	chr8,chr8	-,+	SNAI2,SNTG1	-989370,1009
chr3:53078898-53079141	chr3	+	53078899	53079109	True	NM_016329,NM_006254,NM_001005158,NM_001005159	chr3,chr3,chr3,chr3	-,+,-,-	SFMBT1,PRKCD,SFMBT1,SFMBT1	1030,116113,1030,276
chr20:12318989-12320489	chr20	+	12319202	12320214	True	NM_017714,NM_014962	chr20,chr20	-,+	TASP1,BTBD3	1299431,-420694
chr4:108625961-108626848	chr4	+	108626164	108626888	True	NM_001136258,NM_005443	chr4,chr4	+,-	SGMS2,PAPSS1	118832,14588
chr16:15247310-15247869	chr16	+	15247328	15247838	True	NM_015027,NR_037466	chr16,chr16	+,-	PDXDC1,MIR3180-4	-178546,1071
chr16:15247310-15247869	chr16	+	2184667	2184829	False	NM_001009944,NM_000296,NR_037467,NM_014353	chr16,chr16,chr16,chr16	-,-,-,+	PKD1,PKD1,MIR3180-5,RAB26	1120,1120,1351,13821
chr16:15247310-15247869	chr16	+	18494562	18495072	False	NR_036142,NR_003569,NR_036141,NR_036144	chr16,chr16,chr16,chr16	-,+,-,-	MIR3180-2,ABCC6P1,MIR3180-1,MIR3180-3	1102,87497,1106,1106
chr16:15247310-15247869	chr16	-	15006132	15006642	False	NR_036142,NR_023387,NR_036141,NR_036144	chr16,chr16,chr16,chr16	+,-,+,+	MIR3180-2,ABCC6P2,MIR3180-1,MIR3180-3	-1102,-87573,-1106,-1106
chr16:15247310-15247869	chr16	-	16404788	16405298	False	NR_036142,NR_036447,NR_036141,NM_001079528,NR_036144	chr16,chr16,chr16,chr16,chr16	+,+,+,-,+	MIR3180-2,PKD1P1,MIR3180-1,ABCC6,MIR3180-3	-1103,6167,-1107,-87460,-1107
chr17:26901174-26901388	chr17	+	26901206	26901412	True	NM_003593,NM_005165,NM_033198	chr17,chr17,chr17	+,-,-	FOXN1,ALDOC,PIGS	-50298,2589,-2319
chr11:30574567-30576248	chr11	+	30574707	30575946	True	NM_001584,NM_152316	chr11,chr11	-,+	MPPED2,C11orf46	26144,-230109
chr20:36322676-36324447	chr20	+	36323004	36324484	True	NM_006698,NM_030877	chr20,chr20	-,+	BLCAP,CTNNBL1	-166671,-627
chr4:1107279-1107554	chr4	+	1107348	1107514	True	NM_001193318,NR_033768,NM_001131034,NM_021923,NM_194439	chr4,chr4,chr4,chr4,chr4	-,-,-,+,-	RNF212,TMED11P,RNF212,FGFRL1,RNF212	4,9488,4,-101147,4
chr1:153608153-153608365	chr1	+	153608311	153608395	True	NM_015607,NM_001024211,NM_001024212,NM_001024213,NM_006271,NM_001024210,NM_005979	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,-,+,-,-	CHTOP,S100A13,S100A13,S100A13,S100A1,S100A13,S100A13	-1840,-8194,-8567,-8787,-7492,-1743,-7596
chr14:69611265-69611959	chr14	+	69611407	69611740	True	NM_003861,NM_001193360	chr14,chr14	-,+	DCAF5,EXD2	8235,46453
chr1:36232641-36234172	chr1	+	36232852	36233677	True	NM_022111,NM_017629,NM_001190481	chr1,chr1,chr1	-,+,-	CLSPN,EIF2C4,CLSPN	1934,40150,1934
chr2:131518044-131518773	chr2	+	131518112	131518806	True	NM_001105193,NM_001079530,NM_001105195,NM_001105194,NM_152698	chr2,chr2,chr2,chr2,chr2	+,-,+,+,+	FAM123C,CFC1B,FAM123C,FAM123C,FAM123C	-4939,-160861,-4299,-4299,-5086
chr4:4545547-4545846	chr4	+	4545547	4545893	True	NR_037888,NM_016930	chr4,chr4	+,-	LOC100507266,STX18	-1743,-1772
chr16:23464620-23464979	chr16	+	23464624	23464850	True	NM_019116,NM_153603	chr16,chr16	+,-	UBFD1,COG7	104011,-112
chr9:131086551-131088066	chr9	+	131086730	131087850	True	NM_016035,NM_015679	chr9,chr9	+,-	COQ4,TRUB2	-1998,-2033
chrX:109663927-109665020	chrX	+	109663973	109664977	True	NM_020769,NM_001171689	chrX,chrX	+,-	RGAG1,AMMECR1	-1739,18536
chr19:55052473-55054051	chr19	+	55052705	55053968	True	NR_026716,NM_145057	chr19,chr19	+,-	KIR3DX1,CDC42EP5	-8849,-68283
chr10:79687013-79687361	chr10	+	79687098	79687378	True	NR_024585,NM_004747	chr10,chr10	+,-	LOC100128292,DLG5	-579,-750
chr16:2244698-2245138	chr16	+	2244851	2245087	True	NM_020764,NM_001199173	chr16,chr16	-,+	CASKIN1,MLST8	1428,10090
chr1:117114355-117115806	chr1	+	117114611	117115774	True	NM_001779,NM_001144822,NR_031564,NR_026665	chr1,chr1,chr1,chr1	-,-,+,-	CD58,CD58,MIR320B1,CD58	-896,-896,98596,-896
chr4:56747371-56748465	chr4	+	56747378	56748131	True	NM_006681,NM_178237	chr4,chr4	-,+	NMU,EXOC1	-244913,-27613
chr5:153381926-153383032	chr5	+	153382016	153382716	True	NM_001135037,NM_018691	chr5,chr5	+,-	MFAP3,FAM114A2	35802,35841
chr11:124543819-124544392	chr11	+	124543863	124544421	True	NM_017425,NM_170601,NM_001199922	chr11,chr11,chr11	+,-,-	SPA17,SIAE,SIAE	-174,-86,1828
chr9:111763424-111764733	chr9	+	111763773	111764717	True	NM_003798,NM_017832	chr9,chr9	-,+	CTNNAL1,C9orf6	11097,-67164
chr19:50355097-50355348	chr19	+	50355266	50355394	True	NM_017432,NM_007254	chr19,chr19	+,-	PTOV1,PNKP	-901,15478
chr10:73638534-73639396	chr10	+	73638539	73638949	True	NM_001171936,NM_002778	chr10,chr10	+,-	CDH23,PSAP	-66950,-27457
chr17:7990513-7990957	chr17	+	7990618	7990956	True	NR_036201,NM_001139	chr17,chr17	+,-	MIR4314,ALOX12B	417,115
chr1:154375709-154376841	chr1	+	154375733	154376665	True	NM_001010846,NM_181359,NM_000565	chr1,chr1,chr1	-,+,+	SHE,IL6R,IL6R	97911,1003,1003
chr1:165550936-165551163	chr1	+	165551012	165551208	True	NR_026744,NM_001005214	chr1,chr1	-,+	LOC400794,LRRC52	183,-37585
chr1:101004031-101004559	chr1	+	101004030	101004532	True	NM_022049,NM_001918	chr1,chr1	+,-	GPR88,DBT	-353,-288621
chr17:40086967-40087237	chr17	+	40086989	40087115	True	NM_198830,NM_031421	chr17,chr17	-,+	ACLY,TTC25	-11717,-152
chr2:114415561-114416641	chr2	+	114415676	114416327	True	NR_024531,NM_013412	chr2,chr2	-,+	RPL23AP7,RABL2A	-30961,-30916
chr17:38600137-38601674	chr17	+	38600543	38601689	True	NM_001552,NM_001067	chr17,chr17	+,-	IGFBP4,TOP2A	-918,-26341
chr11:118870645-118872192	chr11	+	118870987	118871989	True	NM_198489,NR_003040	chr11,chr11	+,-	CCDC84,RPL23AP64	-2192,2375
chr3:36977032-36978510	chr3	+	36977254	36978285	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	8313,56555
chr10:23631459-23632617	chr10	+	23631558	23632552	True	NM_153714,NM_001145373	chr10,chr10	-,+	C10orf67,OTUD1	1277,95645
chr19:20151444-20151869	chr19	+	20151619	20151773	True	NM_033196,NM_007138,NM_001077349	chr19,chr19,chr19	-,+,-	ZNF682,ZNF90,ZNF682	-1342,37029,-1555
chr9:103114181-103114743	chr9	+	103114187	103114731	True	NM_001161584,NM_001198807,NM_017746	chr9,chr9,chr9	-,+,-	TEX10,C9orf30,TEX10	172,74763,578
chr3:40518681-40518916	chr3	+	40518784	40518964	True	NM_001145083,NM_001145082,NR_033965,NM_001145093,NR_026746	chr3,chr3,chr3,chr3,chr3	+,+,-,+,+	ZNF619,ZNF619,FLJ33065,ZNF619,ZNF619	-202,-231,-167595,-231,-231
chr11:55032205-55032451	chr11	+	55032253	55032343	True	NM_001004700,NM_024114	chr11,chr11	-,+	OR4C11,TRIM48	339566,-2658
chr11:55032205-55032451	chr11	+	89659811	89659893	False	NM_001105522	chr11	+	TRIM49L1	-2645
chr11:55032205-55032451	chr11	-	89650914	89650996	False	NM_001105522	chr11	-	TRIM49L1	2645
chr1:200003513-200003723	chr1	+	200003512	200003689	True	NM_205860,NM_012482,NM_003822	chr1,chr1,chr1	+,-,+	NR5A2,ZNF281,NR5A2	-6793,375528,-6793
chr1:67402403-67403016	chr1	+	67402786	67402997	True	NM_001077704,NM_207014,NM_001077701	chr1,chr1,chr1	+,-,+	MIER1,WDR78,MIER1	-6911,-12216,-6911
chr14:93580633-93581047	chr14	+	93580877	93581025	True	NM_001142594,NR_002808,NM_014216,NM_001142593	chr14,chr14,chr14,chr14	-,+,-,-	ITPK1,ITPK1-AS1,ITPK1,ITPK1	1288,-47132,1288,1288
chr3:130465738-130466215	chr3	+	130465742	130466091	True	NM_014602,NM_001199181	chr3,chr3	-,+	PIK3R4,ATP2C1	-46,103277
chr4:3464377-3464651	chr4	+	3464485	3464665	True	NM_001164673,NM_002337,NM_173660	chr4,chr4,chr4	+,-,+	DOK7,LRPAP1,DOK7	367,69609,367
chr15:40532308-40532909	chr15	+	40532387	40532830	True	NM_020168,NM_001039905	chr15,chr15	+,-	PAK6,C15orf56	-403,12330
chr8:10586957-10587377	chr8	+	10587066	10587339	True	NM_001040032,NM_031439	chr8,chr8	+,-	C8orf74,SOX7	-56970,733
chr8:67525841-67526217	chr8	+	67525977	67526261	True	NM_019607,NM_001080416,NM_001144755	chr8,chr8,chr8	+,-,-	C8orf44,MYBL1,MYBL1	53525,-497,-497
chr1:151810021-151810222	chr1	+	151810028	151810268	True	NR_024237,NM_005060,NM_001136003	chr1,chr1,chr1	+,-,-	LOC100132111,RORC,C2CD4D	676,-5680,2815
chrX:52829679-52830069	chrX	+	52829688	52829871	True	NM_130775,NM_001009616	chrX,chrX	+,-	XAGE5,SPANXN5	11356,-3300
chrX:52829679-52830069	chrX	-	52475701	52475884	False	NR_033251,NM_001097592	chrX,chrX	-,+	XAGE1C,XAGE1A	57270,35876
chrX:52829679-52830069	chrX	-	52202761	52202944	False	NR_033251,NM_001097592	chrX,chrX	-,+	XAGE1C,XAGE1A	57270,35865
chrX:52829679-52830069	chrX	+	52296229	52296412	False	NR_033257,NM_020411	chrX,chrX	+,-	XAGE1E,XAGE1D	-57271,-35866
chr4:178364033-178364604	chr4	+	178364054	178364370	True	NR_033655,NM_000027,NM_018248,NM_001171988	chr4,chr4,chr4,chr4	-,-,+,-	AGA,AGA,NEIL3,AGA	-397,-397,-133115,-397
chr5:149112491-149113604	chr5	+	149112745	149113386	True	NM_001172698,NM_001892,NM_133263	chr5,chr5,chr5	+,-,+	PPARGC1B,CSNK1A1,PPARGC1B	-2982,-181738,-2982
chr9:5303077-5304012	chr9	+	5303381	5303915	True	NM_005059,NM_134441,NM_002195	chr9,chr9,chr9	-,-,+	RLN2,RLN2,INSL4	715,715,-72021
chr9:5303077-5304012	chr9	+	5338547	5339081	False	NM_002195,NM_006911	chr9,chr9	+,-	INSL4,RLN1	-107187,842
chr17:25409557-25409773	chr17	+	25409590	25409816	True	NM_015626,NM_000625	chr17,chr17	+,-	WSB1,NOS2	211289,717789
chr19:22951685-22952423	chr19	+	22951869	22952262	True	NM_020855,NM_001080409	chr19,chr19	+,-	ZNF492,ZNF99	-134800,577
chr13:54888642-54890303	chr13	+	54888751	54890202	True	NR_031628,NM_006418	chr13,chr13	-,+	MIR1297,OLFM4	-2568,-1285933
chr19:58429999-58430524	chr19	+	58430104	58430544	True	NM_032828,NM_152475	chr19,chr19	+,-	ZNF587,ZNF417	-68980,-2126
chr12:52888962-52889171	chr12	+	52888989	52889220	True	NM_002284,NM_005554	chr12,chr12	+,-	KRT86,KRT6A	-193403,-1808
chr19:49371927-49372680	chr19	+	49372031	49372718	True	NM_014330,NM_020904,NM_001161354	chr19,chr19,chr19	+,-,-	PPP1R15A,PLEKHA4,PLEKHA4	2930,-147,-147
chr4:37456147-37456394	chr4	+	37456218	37456430	True	NM_001104629,NM_001085399	chr4,chr4	+,-	C4orf19,RELL1	-717,231623
chr11:103907953-103908203	chr11	+	103908039	103908251	True	NM_025208,NM_001001711	chr11,chr11	-,+	PDGFD,DDI1	126834,-782
chr2:189859300-189860857	chr2	+	189859302	189860866	True	NR_036076,NR_037401	chr2,chr2	-,+	MIR3129,MIR3606	137022,-26
chr4:7068484-7069202	chr4	+	7068517	7069188	True	NM_152293,NM_025196	chr4,chr4	+,-	TADA2B,GRPEL1	-23412,662
chr19:49258218-49259463	chr19	+	49258819	49259461	True	NM_019113,NM_000148,NM_182575	chr19,chr19,chr19	+,-,-	FGF21,FUT1,IZUMO1	80,-172,-8653
chr6:43859565-43859899	chr6	+	43859596	43859690	True	NR_024478,NM_018135	chr6,chr6	+,-	LOC100132354,MRPS18A	-883,-204047
chr18:67067582-67067854	chr18	+	67067606	67067884	True	NM_152721,NM_006566	chr18,chr18	+,-	DOK6,CD226	399,556398
chr17:2208021-2208391	chr17	+	2208301	2208438	True	NM_021947,NM_017575,NM_001170957	chr17,chr17,chr17	+,-,-	SRR,SMG6,SMG6	-1104,-1232,-1488
chr12:5292504-5294065	chr12	+	5292855	5293987	True	NM_006422,NM_002234	chr12,chr12	-,+	AKAP3,KCNA5	-538512,-139821
chr16:21691980-21693112	chr16	+	21692195	21693133	True	NM_144672,NM_001161683,NM_005849	chr16,chr16,chr16	+,+,-	OTOA,OTOA,IGSF6	-2418,2616,-28223
chr1:13742819-13743275	chr1	+	13743016	13743248	True	NM_001100114,NM_001099852,NM_001099850	chr1,chr1,chr1	+,+,-	PRAMEF21,PRAMEF20,PRAMEF18	-265,-6160,-44611
chr1:13742819-13743275	chr1	+	13522225	13522409	False	NM_001100114,NM_001099852,NM_001099850	chr1,chr1,chr1	+,+,-	PRAMEF21,PRAMEF20,PRAMEF18	-313,-6210,-44656
chr11:94210110-94211945	chr11	+	94210176	94211994	True	NM_017704,NM_005590	chr11,chr11	+,-	ANKRD49,MRE11A	15158,15103
chr8:37311193-37313079	chr8	+	37311802	37313106	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	240194,292508
chr16:57442571-57443239	chr16	+	57442938	57443252	True	NM_020313,NM_002987	chr16,chr16	-,+	CIAPIN1,CCL17	38167,-4310
chr12:112858306-112858961	chr12	+	112858541	112858979	True	NM_002834,NM_001024662	chr12,chr12	+,-	PTPN11,RPL6	-2056,-11098
chr13:37390591-37392542	chr13	+	37391128	37392589	True	NM_001127217,NM_000538	chr13,chr13	-,+	SMAD9,RFXAP	101870,749
chr1:4052851-4053884	chr1	+	4053170	4053848	True	NR_024455,NM_207356	chr1,chr1	+,-	LOC100133612,C1orf174	-236253,-236313
chr12:105478504-105478826	chr12	+	105478670	105478768	True	NR_027752,NM_001034173,NM_015275	chr12,chr12,chr12	-,-,+	ALDH1L2,ALDH1L2,KIAA1033	-329,-329,22723
chr3:39309388-39309697	chr3	+	39309399	39309615	True	NM_005201,NM_001337	chr3,chr3	+,-	CCR8,CX3CR1	61581,11962
chr16:84273838-84274560	chr16	+	84274018	84274528	True	NM_139174,NM_172347	chr16,chr16	+,-	ADAD2,KCNG4	-49346,-662
chr21:28218049-28218479	chr21	+	28218093	28218509	True	NM_006988,NR_024357	chr21,chr21	-,+	ADAMTS1,NCRNA00113	-365,876188
chr9:5985639-5986145	chr9	+	5985800	5986161	True	NM_001017969,NM_005511	chr9,chr9	-,+	KIAA2026,MLANA	21892,-94948
chr17:19436441-19436879	chr17	+	19436462	19436766	True	NM_002404,NM_018242	chr17,chr17	-,+	MFAP4,SLC47A1	-145930,400
chr1:248652747-248653936	chr1	+	248652890	248653892	True	NM_001004697,NM_001004694	chr1,chr1	+,-	OR2T5,OR2T29	-1064,68932
chr1:248652747-248653936	chr1	-	248720789	248721791	False	NM_001004694,NM_001013355	chr1,chr1	-,+	OR2T29,OR2G6	1046,-35892
chr3:50395926-50396237	chr3	+	50396053	50396209	True	NM_007022,NM_007024,NM_006545	chr3,chr3,chr3	+,-,-	CYB561D2,TMEM115,NPRL2	-7807,780,-7567
chr9:96106330-96108045	chr9	+	96106624	96107918	True	NM_001098808,NM_014612	chr9,chr9	-,+	C9orf129,FAM120A	828,106254
chr1:26734752-26735084	chr1	+	26735035	26735109	True	NM_173574,NM_024674	chr1,chr1	-,+	ZNF683,LIN28A	-35769,2159
chr6:150034103-150034521	chr6	+	150034186	150034418	True	NM_004690,NM_005389	chr6,chr6	-,+	LATS1,PCMT1	5034,36412
chr13:52423745-52424771	chr13	+	52423813	52424814	True	NR_027047,NR_027048,NM_031290	chr13,chr13,chr13	-,-,+	NCRNA00282,NCRNA00282,CCDC70	-4527,-4527,11302
chr1:152325453-152325909	chr1	+	152325568	152325940	True	NM_178438,NM_001014342	chr1,chr1	+,-	LCE5A,FLG2	157379,6592
chr17:66449660-66450391	chr17	+	66449900	66450418	True	NM_017983,NM_212471	chr17,chr17	-,+	WIPI1,PRKAR1A	3285,57691
chr16:85786329-85786992	chr16	+	85786496	85786996	True	NM_001861,NM_206967	chr16,chr16	+,-	COX4I1,C16orf74	46176,-1807
chr13:23761787-23762799	chr13	+	23761962	23762836	True	NM_000231,NM_014363	chr13,chr13	+,-	SGCG,SACS	-6953,245055
chr16:87986534-87987626	chr16	+	87986704	87987522	True	NM_001173542,NM_001173541,NM_001173539,NM_017869,NM_079837,NM_001173540,NM_001739	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,+,-	BANP,BANP,BANP,BANP,BANP,BANP,CA5A	5954,-1717,-1717,-1717,-1717,-1717,-16592
chr12:3599312-3600036	chr12	+	3599321	3600023	True	NM_019854,NM_001144958	chr12,chr12	+,-	PRMT8,EFCAB4B	401,262393
chr6:167584415-167585002	chr6	+	167584428	167584900	True	NM_005299,NM_001145121	chr6,chr6	-,+	GPR31,TCP10L2	-13109,-399
chr6:167584415-167585002	chr6	-	167797408	167797650	False	NM_004610,NM_031949	chr6,chr6	-,+	TCP10,TTLL2	399,-58885
chr10:75930412-75932301	chr10	+	75931112	75931709	True	NM_001123,NM_001202449,NM_207012	chr10,chr10,chr10	+,+,-	ADK,ADK,AP3M1	4537,4537,-20286
chr13:114537208-114537467	chr13	+	114537297	114537463	True	NM_001143945,NM_001143946,NR_024609	chr13,chr13,chr13	-,-,+	GAS6,GAS6,FLJ44054	1604,-583,49146
chr19:50878667-50878904	chr19	+	50878692	50878784	True	NM_007121,NM_002691,NM_004851	chr19,chr19,chr19	+,+,-	NR1H2,POLD1,NAPSA	900,8808,-9761
chrX:72301880-72302659	chrX	+	72301922	72302664	True	NM_001042506,NM_001012977	chrX,chrX	+,-	PABPC1L2B,PABPC1L2A	-78621,-2571
chrX:72301880-72302659	chrX	-	72220036	72220778	False	NR_026595,NM_001042506	chrX,chrX	-,+	NCRNA00246,PABPC1L2B	-56447,2573
chr22:25168818-25169140	chr22	+	25168964	25169182	True	NM_001008496,NR_001283	chr22,chr22	-,+	PIWIL3,TOP1P2	1551,-8547
chr20:48551826-48552475	chr20	+	48551938	48552512	True	NM_006038,NM_018683	chr20,chr20	-,+	SPATA2,RNF114	-19858,401
chr6:37320753-37321003	chr6	+	37320873	37320947	True	NM_183078,NM_001162900,NM_003958	chr6,chr6,chr6	+,-,+	RNF8,TMEM217,RNF8	800,-94942,800
chr9:34638079-34639293	chr9	+	34638094	34639072	True	NM_147157,NM_005866,NM_000155	chr9,chr9,chr9	-,-,+	SIGMAR1,SIGMAR1,GALT	-326,-326,7562
chr12:13153271-13153524	chr12	+	13153401	13153515	True	NM_015987,NR_002774	chr12,chr12	-,+	HEBP1,HTR7P1	-158,-76
chr19:12782320-12783344	chr19	+	12782835	12782999	True	NM_001099737,NM_001173498,NM_001930,NM_013407,NM_032332,NM_000528,NM_013406,NM_016145,NR_029375	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,-,-,+,-,-,-,+	WDR83,MAN2B1,DHPS,DHPS,WDR83,MAN2B1,DHPS,C19orf56,WDR83	-5269,-5244,9728,9728,-2370,-5244,9728,-2370,-5269
chr8:42127651-42128293	chr8	+	42127657	42128291	True	NM_001190720,NM_001190721,NM_001190722,NR_033818,NR_033819,NM_033011,NR_033820,NM_001556	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	+,+,+,+,+,-,+,+	IKBKB,IKBKB,IKBKB,IKBKB,IKBKB,PLAT,IKBKB,IKBKB	544,583,528,528,528,-62463,528,528
chr17:654797-655102	chr17	+	654876	655018	True	NM_015721,NR_024120	chr17,chr17	-,+	GEMIN4,DBIL5P	533,881
chr20:3763174-3763754	chr20	+	3763255	3763393	True	NM_001810,NM_015417,NM_004358	chr20,chr20,chr20	-,-,+	CENPB,SPEF1,CDC25B	3994,-1153,13007
chr1:15913029-15913400	chr1	+	15913172	15913416	True	NM_032341,NM_024758	chr1,chr1	+,-	DDI2,AGMAT	30536,-1567
chr6:108879944-108880245	chr6	+	108879977	108880108	True	NM_201559,NM_152827,NM_001455	chr6,chr6,chr6	+,-,+	FOXO3,SNX3,FOXO3	917,-297513,1960
chr11:133824131-133825207	chr11	+	133824179	133825247	True	NM_014987,NR_027276	chr11,chr11	-,+	IGSF9B,LOC100128239	1683,76919
chr22:45899233-45899576	chr22	+	45899287	45899417	True	NM_001996,NM_006485,NM_006487,NM_006486,NM_148674	chr22,chr22,chr22,chr22,chr22	+,+,+,+,-	FBLN1,FBLN1,FBLN1,FBLN1,SMC1B	-619,-619,-619,-619,-89787
chr19:55088273-55089767	chr19	+	55088478	55089233	True	NM_001130917,NM_006866,NM_145057	chr19,chr19,chr19	+,+,-	LILRA2,LILRA2,CDC42EP5	-3277,-3277,-104056
chr17:54671846-54672307	chr17	+	54671927	54672201	True	NM_001085430,NM_005450	chr17,chr17	-,+	C17orf67,NOG	221099,-918
chr17:34135562-34135991	chr17	+	34135662	34136030	True	NM_001032278,NM_139215,NM_003487	chr17,chr17,chr17	-,+,+	MMP28,TAF15,TAF15	-13022,457,457
chr2:97204055-97204373	chr2	+	97204119	97204421	True	NM_212481,NR_026875	chr2,chr2	+,-	ARID5A,NEURL3	-1706,-30273
chr9:139137282-139137507	chr9	+	139137346	139137428	True	NM_015597,NM_181701	chr9,chr9	+,-	GPSM1,QSOX2	84503,309
chr9:34647891-34648709	chr9	+	34648066	34648742	True	NM_000155,NM_001142784,NM_004512,NM_147162,NM_005866	chr9,chr9,chr9,chr9,chr9	+,+,+,+,-	GALT,IL11RA,IL11RA,IL11RA,SIGMAR1	-1483,3439,5189,5189,-10298
chr18:49867245-49867528	chr18	+	49867457	49867529	True	NM_005215,NM_016626	chr18,chr18	+,-	DCC,MEX3C	-973,-1143406
chr21:40687483-40688785	chr21	+	40687602	40688570	True	NM_004627,NM_001007246,NM_018963,NR_033800,NM_033656	chr21,chr21,chr21,chr21,chr21	+,-,-,-,-	WRB,BRWD1,BRWD1,NCRNA00257,BRWD1	63642,-2046,-2046,-714,-2046
chr13:73634771-73636274	chr13	+	73634853	73636240	True	NM_001730,NM_014953	chr13,chr13	+,-	KLF5,DIS3	-1770,-278509
chr12:8541705-8542235	chr12	+	8542047	8542127	True	NM_001007033,NR_024420	chr12,chr12	+,-	CLEC6A,LOC389634	66463,1271
chr2:131278951-131279663	chr2	+	131278956	131279712	True	NR_027314,NM_032545,NM_001079530	chr2,chr2,chr2	-,+,+	LOC150527,CFC1,CFC1B	27806,-171,-340
chr2:131278951-131279663	chr2	-	131356275	131356961	False	NR_027314,NM_032545,NM_001079530	chr2,chr2,chr2	+,-,-	LOC150527,CFC1,CFC1B	-27904,171,340
chr11:70115222-70115721	chr11	+	70115333	70115695	True	NM_133266,NM_003626,NM_177423	chr11,chr11,chr11	-,+,+	SHANK2,PPFIA1,PPFIA1	392278,1127,1127
chrX:43513316-43514100	chrX	+	43513316	43514052	True	NM_000898,NM_000240	chrX,chrX	-,+	MAOB,MAOA	227719,1356
chr10:26877377-26877640	chr10	+	26877477	26877681	True	NM_001012750,NR_026793	chr10,chr10	-,+	ABI1,NCRNA00264	272385,1112
chr3:141457682-141457909	chr3	+	141457682	141457948	True	NM_001201370,NM_183237,NR_037703,NR_037702,NM_001178140,NM_014245	chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,-,+	RNF7,RNF7,RNF7,RNF7,TFDP2,RNF7	-682,-682,-682,-682,261331,-682
chr15:66788725-66789048	chr15	+	66788806	66788975	True	NM_006049,NM_000968,NR_003105,NR_002440,NR_002441,NR_002442,NR_002443,NM_017975	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,+,-,-,-,-,+	SNAPC5,RPL4,ZWILCH,SNORD16,SNORD18A,SNORD18B,SNORD18C,ZWILCH	1221,8259,8455,6323,6727,5504,4731,8455
chr19:19973493-19975088	chr19	+	19973521	19974809	True	NM_021047,NM_001145404	chr19,chr19	+,-	ZNF253,ZNF506	1904,-40961
chr11:305077-307027	chr11	+	305569	306821	True	NM_006435,NM_003641,NM_001025295	chr11,chr11,chr11	+,+,-	IFITM2,IFITM1,IFITM5	1285,7169,-6043
chr20:60793784-60794297	chr20	+	60793799	60794247	True	NM_007232,NM_014835	chr20,chr20	-,+	HRH3,OSBPL2	1126,19332
chr18:29672673-29672879	chr18	+	29672735	29672859	True	NM_014939,NM_001191324,NM_016271,NM_198128	chr18,chr18,chr18,chr18	-,+,+,+	TRAPPC8,RNF138,RNF138,RNF138	-149644,-217,-968,-217
chr14:102769420-102771115	chr14	+	102769550	102771021	True	NM_014226,NM_018335	chr14,chr14	-,+	RAGE,ZNF839	561,15074
chr12:122649119-122651076	chr12	+	122649367	122651103	True	NM_152759,NM_001014336	chr12,chr12	+,-	LRRC43,IL31	1162,7693
chr19:55919671-55920736	chr19	+	55919689	55920445	True	NM_000991,NM_014501	chr19,chr19	+,-	RPL28,UBE2S	-22440,-364
chr11:62107454-62108250	chr11	+	62107865	62108302	True	NM_001083926,NM_206998,NM_025080	chr11,chr11,chr11	+,-,+	ASRGL1,SCGB1D4,ASRGL1	-3142,-41329,-3142
chr6:160928193-160928930	chr6	+	160928212	160928967	True	NR_028093,NR_028092,NM_021977	chr6,chr6,chr6	-,-,+	LPAL2,LPAL2,SLC22A3	3240,3240,-158838
chr7:129091073-129091520	chr7	+	129091077	129091541	True	NM_020704,NR_029614	chr7,chr7	+,-	FAM40B,MIR182	-16858,318841
chr1:149871909-149872259	chr1	+	149872065	149872305	True	NM_175065,NM_016074	chr1,chr1	-,+	HIST2H2AB,BOLA1	-12599,-961
chr9:38414154-38414515	chr9	+	38414216	38414550	True	NM_001007563,NM_000692	chr9,chr9	-,+	IGFBPL1,ALDH1B1	9944,-21565
chr4:52917704-52917978	chr4	+	52917890	52917974	True	NM_145263,NM_000232	chr4,chr4	+,-	SPATA18,SGCB	-349,-13405
chr3:42307001-42307235	chr3	+	42307163	42307277	True	NM_014965,NM_001174138,NM_000729	chr3,chr3,chr3	+,-,-	TRAK1,CCK,CCK	-105553,-1724,435
chr6:117804693-117804977	chr6	+	117804735	117804999	True	NM_173674,NM_002944	chr6,chr6	+,-	DCBLD1,ROS1	-966,-57717
chr10:13547676-13548135	chr10	+	13547733	13548145	True	NM_003675,NM_152751,NM_001100912	chr10,chr10,chr10	+,-,-	PRPF18,BEND7,BEND7	80793,-2757,-2757
chr11:2467130-2467353	chr11	+	2467256	2467338	True	NM_000218,NM_014555	chr11,chr11	+,-	KCNQ1,TRPM5	-1088,-22981
chr5:175342175-175343916	chr5	+	175342891	175343603	True	NM_032361,NM_001008220	chr5,chr5	-,+	THOC3,CPLX2	51992,-44444
chr5:175342175-175343916	chr5	-	177349847	177350340	False	NM_006261,NR_003615	chr5,chr5	-,+	PROP1,LOC728554	72956,-47637
chrX:15612603-15613553	chrX	+	15612704	15613590	True	NR_026551,NM_021804	chrX,chrX	+,-	CA5BP1,ACE2	79448,6652
chr3:51909576-51910587	chr3	+	51909718	51910571	True	NM_001145059,NM_203424	chr3,chr3	-,+	IQCF5,IQCF2	-118,-14135
chr1:6454812-6455976	chr1	+	6455333	6455849	True	NM_007274,NM_181864,NM_031475	chr1,chr1,chr1	-,-,+	ACOT7,ACOT7,ESPN	-1507,-9450,28998
chr22:39713084-39713285	chr22	+	39713178	39713330	True	NM_001033853,NM_000967,NR_000028,NR_002439,NR_000026,NR_000027,NM_145731	chr22,chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,-,-,+	RPL3,RPL3,SNORD83B,SNORD43,RNU86,SNORD83A,SYNGR1	2390,2390,-3262,1838,-277,-1866,32623
chr1:154931922-154932595	chr1	+	154931948	154932454	True	NM_001826,NM_020524,NM_138300	chr1,chr1,chr1	+,-,-	CKS1B,PBXIP1,PYGO2	14663,-3381,1854
chr3:149823839-149825479	chr3	+	149823932	149825326	True	NM_053024,NR_036538	chr3,chr3	-,+	PFN2,LOC646903	-135191,-134917
chr17:26733413-26734522	chr17	+	26733490	26734353	True	NM_080669,NM_015077	chr17,chr17	-,+	SLC46A1,SARM1	-262,-34559
chr19:42261882-42262312	chr19	+	42261901	42262346	True	NM_002483,NM_006890	chr19,chr19	+,-	CEACAM6,CEACAM7	-2554,-69805
chr17:8020798-8021054	chr17	+	8020884	8021098	True	NM_001165967,NR_036201,NM_001165960,NM_021628,NM_032580	chr17,chr17,chr17,chr17,chr17	-,+,-,-,-	HES7,MIR4314,ALOXE3,ALOXE3,HES7	6362,-29561,1186,812,6362
chr17:8646373-8647879	chr17	+	8646393	8647545	True	NM_001158261,NM_004822,NM_144681	chr17,chr17,chr17	-,+,-	CCDC42,NTN1,CCDC42	659,277313,659
chrX:21674424-21674773	chrX	+	21674538	21674750	True	NM_015884,NM_153270	chrX,chrX	+,-	MBTPS2,KLHL34	182905,1748
chr19:45909970-45910306	chr19	+	45910051	45910315	True	NM_001142502,NM_012099,NM_006663	chr19,chr19,chr19	-,+,-	PPP1R13L,CD3EAP,PPP1R13L	-444,-635,-1739
chr14:94392705-94392924	chr14	+	94392711	94392955	True	NM_138344,NR_027004	chr14,chr14	+,-	FAM181A,C14orf86	-7504,7
chr3:15368829-15369479	chr3	+	15369080	15369494	True	NM_033083,NM_004844	chr3,chr3	+,-	EAF1,SH3BP5	99569,4664
chrX:122319972-122320693	chrX	+	122320031	122320737	True	NM_007325,NM_000828,NM_001081550	chrX,chrX,chrX	+,+,-	GRIA3,GRIA3,THOC2	-1993,-1993,546217
chr11:101918450-101919057	chr11	+	101918575	101918925	True	NM_178127,NM_032930,NM_001195005	chr11,chr11,chr11	-,+,+	ANGPTL5,C11orf70,C11orf70	-131322,-457,-457
chr17:73895052-73895300	chr17	+	73895243	73895348	True	NM_173547,NM_001113324,NM_032478	chr17,chr17,chr17	-,+,-	TRIM65,C17orf106,MRPL38	-2189,79949,5884
chr12:8380191-8380577	chr12	+	8380272	8380558	True	NM_018088,NR_026788	chr12,chr12	-,+	FAM90A1,FAM66C	-58,-47518
chr10:104473766-104473991	chr10	+	104473886	104473956	True	NM_178858,NM_004311	chr10,chr10	+,-	SFXN2,ARL3	341,284
chr6:119399722-119400033	chr6	+	119399729	119400057	True	NR_030315,NM_024581,NM_014034	chr6,chr6,chr6	-,-,+	MIR548B,FAM184A,ASF1A	-9421,33,-184539
chr1:226076057-226076313	chr1	+	226076089	226076308	True	NM_020997,NM_000120,NM_014698	chr1,chr1,chr1	-,+,-	LEFTY1,EPHX1,TMEM63A	589,-63138,-5669
chrX:147063280-147063664	chrX	+	147063325	147063499	True	NM_152578,NR_024503	chrX,chrX	+,-	FMR1NB,FMR1-AS1	-527,-59649
chr19:46405255-46405826	chr19	+	46405267	46405681	True	NM_004497,NM_001012643	chr19,chr19	+,-	FOXA3,MYPOP	-37800,231
chr12:72154011-72155178	chr12	+	72154097	72155059	True	NM_014999,NR_024072	chr12,chr12	+,-	RAB21,MRS2P2	-5496,89754
chr19:796273-796717	chr19	+	796289	796729	True	NM_024888,NM_175847,NM_031991,NM_031990,NM_002819	chr19,chr19,chr19,chr19,chr19	-,+,+,+,+	LPPR3,PTBP1,PTBP1,PTBP1,PTBP1	25273,662,662,662,662
chr9:140135462-140135837	chr9	+	140135471	140135877	True	NM_001004353,NM_006088,NM_001001710	chr9,chr9,chr9	+,+,-	C9orf173,TUBB2C,FAM166A	9852,21,6395
chr12:53491918-53492314	chr12	+	53492065	53492358	True	NM_002178,NM_003578,NM_032840	chr12,chr12,chr12	+,+,-	IGFBP6,SOAT2,SPRYD3	-680,4915,-18861
chr9:139624816-139625130	chr9	+	139624933	139625001	True	NR_003672,NR_024543,NR_024542,NR_002975,NR_033913,NR_002958	chr9,chr9,chr9,chr9,chr9,chr9	-,-,-,-,+,-	SNHG7,SNHG7,SNHG7,SNORA43,LOC100128593,SNORA17	-2297,-2297,-2297,-4244,15611,-3602
chr16:68278011-68278595	chr16	+	68278134	68278410	True	NM_024939,NM_012320	chr16,chr16	-,+	ESRP2,PLA2G15	-7998,836
chr2:175199919-175200440	chr2	+	175199928	175200486	True	NM_001145250,NM_004882	chr2,chr2	+,-	SP9,CIR1	-158,60007
chr9:77487018-77489006	chr9	+	77487666	77488544	True	NM_012383,NM_001177311	chr9,chr9	+,-	OSTF1,TRPM6	214853,13777
chr4:159702041-159702480	chr4	+	159702208	159702526	True	NM_005038,NM_020840	chr4,chr4	-,+	PPID,FNIP2	-57656,-12084
chr15:55582859-55583143	chr15	+	55582980	55583164	True	NM_004855,NM_183235	chr15,chr15	+,-	PIGB,RAB27A	27968,-979
chr9:37553329-37553885	chr9	+	37553352	37553556	True	NM_022490,NM_012166	chr9,chr9	+,-	POLR1E,FBXO10	-67465,22754
chr8:140716913-140717764	chr8	+	140717019	140717713	True	NM_016601,NM_017444	chr8,chr8	-,+	KCNK9,CHRAC1	-1720,803687
chr2:86849888-86850129	chr2	+	86849892	86850068	True	NM_022780,NM_001198952,NM_001198951,NM_005667	chr2,chr2,chr2,chr2	+,-,-,-	RMND5A,RNF103,RNF103,RNF103	97345,982,982,982
chr3:108836217-108836952	chr3	+	108836217	108836937	True	NM_014429,NR_033977	chr3,chr3	-,+	MORC1,FLJ22763	106,18623
chr16:55359983-55360385	chr16	+	55360002	55360390	True	NR_034105,NM_024335	chr16,chr16	-,+	CRNDE,IRX6	-396923,-1589
chr14:102028735-102029093	chr14	+	102028735	102029021	True	NR_002770,NR_031649,NM_001362	chr14,chr14,chr14	-,-,+	DIO3OS,MIR1247,DIO3	-6722,-1976,-1098
chr2:25263233-25263964	chr2	+	25263244	25263823	True	NM_016544,NM_014971	chr2,chr2	-,+	DNAJC27,EFR3B	-68281,1149
chr19:14695291-14696983	chr19	+	14695320	14696847	True	NM_004146,NM_207390,NM_001204118	chr19,chr19,chr19	-,+,+	NDUFB7,CLEC17A,CLEC17A	-12431,-1475,-1475
chr19:14695291-14696983	chr19	+	14699755	14700869	False	NM_004146,NM_207390,NM_001204118	chr19,chr19,chr19	-,+,+	NDUFB7,CLEC17A,CLEC17A	-16866,-5910,-5910
chr17:37556963-37557274	chr17	+	37556973	37557263	True	NM_001184906,NM_015083,NM_032875	chr17,chr17,chr17	-,+,-	FBXL20,CDK12,FBXL20	696,60475,696
chr11:111812327-111814026	chr11	+	111812690	111813744	True	NM_001885,NM_001037954	chr11,chr11	-,+	CRYAB,DIXDC1	-30217,-4814
chr11:1686187-1686571	chr11	+	1686284	1686616	True	NR_026642,NR_026643	chr11,chr11	-,+	FAM99B,FAM99A	20293,212
chr11:1686187-1686571	chr11	-	1707220	1707500	False	NR_026642,NM_001012416	chr11,chr11	-,+	FAM99B,KRTAP5-6	-361,10924
chr4:89378054-89378256	chr4	+	89378092	89378156	True	NM_016323,NM_001042616	chr4,chr4	+,-	HERC5,PIGY	111,66849
chr5:49716588-49717715	chr5	+	49716608	49716948	True	NM_198449,NM_001178055	chr5,chr5	-,+	EMB,PARP8	20346,244784
chr2:218808502-218808868	chr2	+	218808546	218808828	True	NR_034176,NM_022648	chr2,chr2	+,-	RUFY4,TNS1	90828,18
chr21:38443353-38445183	chr21	+	38443465	38444899	True	NM_001001894,NM_153682,NR_028352,NM_153681	chr21,chr21,chr21,chr21	+,-,-,-	TTC3,PIGP,PIGP,PIGP	671,609,609,254
chr7:27185559-27186388	chr7	+	27185689	27186263	True	NR_002795,NM_024014,NM_019102	chr7,chr7,chr7	+,-,-	HOXA11-AS1,HOXA6,HOXA5	38763,1155,-2402
chrX:57018981-57020067	chrX	+	57019024	57019840	True	NR_027139,NM_001010862,NR_015367	chrX,chrX,chrX	-,-,+	SPIN3,SPIN3,LOC550643	2198,2198,-263358
chr9:139291809-139292653	chr9	+	139291813	139292697	True	NM_003086,NM_015160	chr9,chr9	-,+	SNAPC4,PMPCA	242,12418
chr15:75661047-75661281	chr15	+	75661066	75661330	True	NM_006715,NM_024608	chr15,chr15	-,+	MAN2C1,NEIL1	-125,-21786
chr16:21532198-21532419	chr16	+	21532310	21532444	True	NM_001077180,NR_002594	chr16,chr16	+,-	METTL9,SLC7A5P2	78411,-545
chr16:21532198-21532419	chr16	+	87903691	87903741	False	NM_001173539,NM_003486	chr16,chr16	+,-	BANP,SLC7A5	81296,-591
chr16:21532198-21532419	chr16	+	29625578	29625712	False	NR_002593,NM_001030288	chr16,chr16	-,+	SLC7A5P1,SPN	-540,48587
chr6:155421472-155422325	chr6	+	155421586	155422166	True	NM_012454,NM_016020	chr6,chr6	+,-	TIAM2,TFB1M	-10215,213501
chr8:26721981-26722425	chr8	+	26722080	26722462	True	NM_033302,NM_033303,NM_000680,NM_033304,NM_001386	chr8,chr8,chr8,chr8,chr8	-,-,-,-,+	ADRA1A,ADRA1A,ADRA1A,ADRA1A,DPYSL2	510,510,510,510,-286710
chr2:27346438-27346656	chr2	+	27346552	27346618	True	NM_032604,NM_001166240,NM_006569,NM_001166239	chr2,chr2,chr2,chr2	+,-,-,-	ABHD1,CGREF1,CGREF1,CGREF1	38,-4557,-4557,-4779
chr11:67121638-67122312	chr11	+	67121710	67122334	True	NM_021173,NR_024469	chr11,chr11	-,+	POLD4,LOC100130987	-658,-36451
chr17:16117486-16117686	chr17	+	16117485	16117709	True	NM_006311,NM_004278	chr17,chr17	-,+	NCOR1,PIGL	1215,2799
chr22:29998261-29998792	chr22	+	29998545	29998666	True	NM_016418,NM_003634,NM_181825,NM_181832,NM_181833,NM_181830,NM_181831,NM_000268,NM_181829,NM_181828	chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22	+,-,+,+,+,+,+,+,+,+	NF2,NIPSNAP1,NF2,NF2,NF2,NF2,NF2,NF2,NF2,NF2	878,-21219,878,878,878,878,878,878,878,878
chr10:5541165-5541393	chr10	+	5541201	5541365	True	NM_017422,NM_005185	chr10,chr10	-,+	CALML5,CALML3	218,25558
chrX:50556464-50556684	chrX	+	50556479	50556571	True	NM_020717,NR_027121,NR_003933	chrX,chrX,chrX	-,-,+	SHROOM4,SHROOM4,LOC347376	523,523,91860
chr3:184874263-184874676	chr3	+	184874426	184874726	True	NM_004721,NM_001025266	chr3,chr3	+,-	MAP3K13,C3orf70	206243,-3624
chr2:198357455-198358748	chr2	+	198357790	198358435	True	NM_002157,NM_002156,NM_001202485,NM_199440	chr2,chr2,chr2,chr2	+,-,+,-	HSPE1,HSPD1,HSPE1-MOBKL3,HSPD1	6285,6262,6285,6620
chr14:50103052-50104946	chr14	+	50103204	50104724	True	NM_002408,NM_018139,NM_001083908	chr14,chr14,chr14	+,-,-	MGAT2,C14orf104,C14orf104	-15766,-1256,-1256
chr3:113271082-113271664	chr3	+	113271107	113271657	True	NM_144718,NM_017699	chr3,chr3	-,+	SPICE1,SIDT1	-37073,-19947
chr15:73754431-73755080	chr15	+	73754605	73754953	True	NM_001042367,NM_005477	chr15,chr15	+,-	C15orf60,HCN4	-19165,-93000
chr17:7326690-7327631	chr17	+	7326915	7327460	True	NM_152766,NM_199339,NM_175734	chr17,chr17,chr17	-,+,+	C17orf61,SPEM1,C17orf74	-19465,-3287,1474
chr6:6588929-6590548	chr6	+	6589078	6590584	True	NM_004271,NR_026970	chr6,chr6	+,-	LY86,LY86-AS1	-195,32526
chr1:36951692-36952570	chr1	+	36951706	36952330	True	NM_000760,NM_024676,NM_172313,NM_156039	chr1,chr1,chr1,chr1	-,+,-,-	CSF3R,SH3D21,CSF3R,CSF3R	-2791,-179049,-2791,-2791
chr1:55464879-55465280	chr1	+	55464901	55465329	True	NM_057176,NM_014762	chr1,chr1	+,-	BSND,DHCR24	-335,-111980
chr2:47629963-47630231	chr2	+	47630017	47630199	True	NM_022055,NM_000251	chr2,chr2	-,+	KCNK12,MSH2	167321,63
chr7:99756632-99757197	chr7	+	99756897	99756975	True	NM_018275,NM_024637,NM_001008395	chr7,chr7,chr7	-,-,+	C7orf43,GAL3ST4,C7orf59	-595,9450,-10433
chr17:58469171-58469447	chr17	+	58469240	58469306	True	NM_181707,NM_032582	chr17,chr17	+,-	C17orf64,USP32	30558,330
chr5:145584754-145585436	chr5	+	145584754	145585215	True	NM_020117,NM_018989	chr5,chr5	-,+	LARS,RBM27	-22460,-1645
chrX:54816019-54817295	chrX	+	54816230	54817286	True	NM_177433,NM_198510	chrX,chrX	+,-	MAGED2,ITIH5L	16884,7437
chr15:58281269-58282703	chr15	+	58281417	58282761	True	NM_020980,NM_170697	chr15,chr15	+,-	AQP9,ALDH1A2	147646,23536
chr19:12149487-12149972	chr19	+	12149668	12149839	True	NM_001136501,NM_001080411	chr19,chr19	+,-	ZNF844,ZNF433	25706,-3143
chr7:66205759-66206033	chr7	+	66205914	66206048	True	NR_003934,NM_014504	chr7,chr7	-,+	LOC729156,RABGEF1	103815,-322
chr2:202132197-202132993	chr2	+	202132205	202132617	True	NM_001080125,NM_001127391,NM_033356	chr2,chr2,chr2	+,-,+	CASP8,ALS2CR12,CASP8	-9502,89534,-7033
chr8:143866374-143867037	chr8	+	143866473	143867059	True	NM_177477,NM_177476,NM_177457,NM_002066,NM_003695,NM_023946	chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,+,-,-	LYNX1,LYNX1,LYNX1,GML,LY6D,LYNX1	-7729,-8036,-6833,49157,999,-6834
chr17:37608094-37609264	chr17	+	37608190	37609173	True	NM_004774,NM_016507,NM_015083	chr17,chr17,chr17	-,+,+	MED1,CDK12,CDK12	-663,8565,8565
chr1:41845619-41847112	chr1	+	41845755	41846875	True	NM_001956,NR_037868	chr1,chr1	-,+	EDN2,LOC100507178	103519,-365544
chr5:122424111-122424374	chr5	+	122424165	122424423	True	NM_001136239,NM_000943	chr5,chr5	+,-	PRDM6,PPIC	417,-51740
chr1:155190911-155192081	chr1	+	155191105	155191688	True	NR_002188,NM_198883	chr1,chr1	-,+	GBAP1,MTX1	5693,-12666
chr8:42233525-42234455	chr8	+	42233528	42234366	True	NM_014420,NM_001135694	chr8,chr8	-,+	DKK4,VDAC3	364,14979
chr7:6678285-6678585	chr7	+	6678359	6678631	True	NM_017560,NM_006956	chr7,chr7	+,-	ZNF853,ZNF12	-22883,67985
chr16:19728458-19728828	chr16	+	19728614	19728856	True	NM_153208,NM_001012991	chr16,chr16	+,-	IQCK,C16orf88	-895,686
chr19:1653748-1654274	chr19	+	1654156	1654270	True	NM_001136139,NM_003200,NM_001080488	chr19,chr19,chr19	-,-,+	TCF3,TCF3,ONECUT3	-3870,-1830,99391
chr9:136150679-136150886	chr9	+	136150679	136150827	True	NM_000972,NM_020469	chr9,chr9	+,-	RPL7A,ABO	64241,-49
chrX:128788069-128788415	chrX	+	128788120	128788438	True	NM_017413,NM_003399	chrX,chrX	-,+	APLN,XPNPEP2	545,84507
chr2:230130788-230131038	chr2	+	230130813	230131070	True	NM_174899,NM_001100818,NM_017933	chr2,chr2,chr2	+,-,-	FBXO36,PID1,PID1	656136,5037,5037
chr7:17025722-17027044	chr7	+	17025721	17026997	True	NM_176813,NM_014399	chr7,chr7	-,+	AGR3,TSPAN13	-104108,-232426
chr16:12054372-12056238	chr16	+	12054560	12055740	True	NM_001130007,NM_001192	chr16,chr16	-,+	GSPT1,TNFRSF17	-44041,3223
chr19:40948761-40949316	chr19	+	40948760	40949204	True	NM_013368,NM_020971,NM_203344	chr19,chr19,chr19	-,+,-	SERTAD3,SPTBN4,SERTAD3	-255,23921,1128
chr4:72228626-72229303	chr4	+	72228708	72229297	True	NM_000583,NM_003759	chr4,chr4	-,+	GC,SLC4A4	420839,-23989
chr22:38073470-38073882	chr22	+	38073490	38073753	True	NM_002305,NM_006498,NM_024313	chr22,chr22,chr22	+,-,+	LGALS1,LGALS2,NOL12	-1928,-97466,8590
chr10:89117288-89118264	chr10	+	89117293	89118157	True	NM_001009610,NR_024397	chr10,chr10	+,-	FAM22D,LOC728190	122,-14978
chr10:89117288-89118264	chr10	+	88985073	88985523	False	NM_001099338,NR_024397	chr10,chr10	+,-	FAM22A,LOC728190	70,116842
chr10:89117288-89118264	chr10	+	81462851	81463301	False	NR_027512,NM_001098668	chr10,chr10	+,-	LOC650623,SFTPA2	-20182,-142688
chr10:89117288-89118264	chr10	+	81600982	81601432	False	NR_029407,NM_003019	chr10,chr10	+,-	LOC642361,SFTPD	-15386,107479
chr4:84031306-84031754	chr4	+	84031330	84031716	True	NM_016619,NM_001130716,NM_001130715,NM_016129	chr4,chr4,chr4,chr4	-,-,-,+	PLAC8,PLAC8,PLAC8,COPS4	4245,-318,4245,-75142
chr17:71188190-71188442	chr17	+	71188260	71188415	True	NM_018714,NM_001098832	chr17,chr17	+,-	COG1,FAM104A	757,40168
chr7:72970922-72971240	chr7	+	72971069	72971239	True	NM_001077621,NR_036682,NM_001707,NM_001197244	chr7,chr7,chr7,chr7	+,-,-,-	VPS37D,BCL7B,BCL7B,BCL7B	110934,413,876,876
chr1:228640590-228642556	chr1	+	228640609	228642406	True	NM_033445,NM_175055	chr1,chr1	-,+	HIST3H2A,HIST3H2BB	3205,3401
chr1:157963657-157963863	chr1	+	157963705	157963861	True	NM_018240,NR_033946	chr1,chr1	+,-	KIRREL,LOC646268	-693,146619
chr16:719417-719647	chr16	+	719464	719678	True	NM_001005920,NM_003961,NM_138769	chr16,chr16,chr16	-,+,+	JMJD8,RHBDL1,RHOT2	14811,6396,-1382
chr12:52965766-52967306	chr12	+	52965896	52967128	True	NM_175053,NM_002284	chr12,chr12	-,+	KRT74,KRT86	531,-270298
chr16:640978-641376	chr16	+	640977	641221	True	NM_001172665,NM_001172664,NM_001172666,NM_001040160,NM_001172663,NM_021168	chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,-,+,+	RAB40C,RAB40C,RAB40C,C16orf13,RAB40C,RAB40C	-951,-1359,-951,45176,-1671,-855
chr19:1001032-1001255	chr19	+	1001036	1001304	True	NM_138690,NM_001033026	chr19,chr19	+,-	GRIN3B,C19orf6	-650,19887
chr2:118862353-118862707	chr2	+	118862495	118862578	True	NM_019044,NM_016133	chr2,chr2	-,+	CCDC93,INSIG2	-90756,-16504
chr6:74228281-74230010	chr6	+	74228365	74230001	True	NM_001402,NM_133645	chr6,chr6	-,+	EEF1A1,MTO1	804,-56970
chr6:40345435-40346327	chr6	+	40345444	40346242	True	NR_024015,NM_020737	chr6,chr6	+,-	TDRG1,LRFN2	50,208934
chr6:45990004-45990637	chr6	+	45990041	45990681	True	NM_016929,NM_014936	chr6,chr6	-,+	CLIC5,ENPP4	-6444,107019
chr21:45580797-45581456	chr21	+	45580928	45581352	True	NM_198155,NM_015259	chr21,chr21	+,-	C21orf33,ICOSLG	-27485,79532
chr20:62887453-62888275	chr20	+	62887528	62888241	True	NM_001104925,NM_005286	chr20,chr20	+,-	PCMTD2,NPBWR2	-531,-149344
chr9:35103708-35105304	chr9	+	35103714	35105246	True	NM_032634,NM_006377,NM_152850,NM_013442,NM_001201484	chr9,chr9,chr9,chr9,chr9	-,+,-,-,-	PIGO,UNC13B,PIGO,STOML2,PIGO	-7168,56742,-7116,-560,-7168
chr2:98717110-98718951	chr2	+	98717293	98718550	True	NM_015348,NM_144992	chr2,chr2	-,+	TMEM131,VWA3B	-104939,-13749
chr20:11888572-11889777	chr20	+	11888589	11889488	True	NM_000214,NM_014962	chr20,chr20	-,+	JAG1,BTBD3	-1233895,9076
chr13:26848812-26850285	chr13	+	26849182	26850011	True	NM_001260,NM_005977	chr13,chr13	+,-	CDK8,RNF6	-20485,-52674
chr11:47289353-47289812	chr11	+	47289356	47289838	True	NM_130472,NM_130473,NM_130470,NM_130471,NM_130476,NM_130474,NM_130475,NM_003682,NM_001131064,NM_001135943,NM_001130101,NM_001135944,NM_005693	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,+,+,+,-,+,+,+,+	MADD,MADD,MADD,MADD,MADD,MADD,MADD,MADD,ACP2,MADD,NR1H3,MADD,NR1H3	1360,1360,1088,1360,1832,1360,1832,1360,-18899,1832,-9911,1360,-9911
chr19:45662743-45663153	chr19	+	45662841	45663169	True	NM_212550,NM_198478	chr19,chr19	+,-	BLOC1S3,NKPD1	18833,289
chr3:122497670-122497980	chr11	-	82845720	82845882	False	NM_015885,NM_014488	chr11,chr11	+,-	PCF11,RAB30	22254,-62836
chr3:122497670-122497980	chr3	+	122497708	122497873	True	NM_024610,NM_032839	chr3,chr3	-,+	HSPBAP1,DIRC2	14840,16027
chr17:42975226-42975881	chr17	+	42975262	42975930	True	NM_001142605,NM_213607,NM_004247	chr17,chr17,chr17	-,+,-	EFTUD2,CCDC103,EFTUD2	1113,1223,1113
chr15:43636926-43637406	chr15	+	43637027	43637280	True	NM_001159280,NM_014793	chr15,chr15	+,-	ADAL,LCMT2	-14218,-14207
chr4:141272556-141272831	chr4	+	141272611	141272795	True	NM_001153446,NM_001153585,NM_001153690,NM_001153635,NR_033939	chr4,chr4,chr4,chr4,chr4	+,+,+,+,-	SCOC,SCOC,SCOC,SCOC,LOC100129858	-8065,-8047,-8047,-8065,21813
chr13:28714448-28714672	chr13	+	28714448	28714661	True	NR_029383,NM_175854	chr13,chr13	-,+	LOC100288730,PAN3	-1137,-1861
chrX:153285964-153287595	chrX	+	153286099	153287592	True	NR_031757,NM_001569,NR_036174,NM_001025242,NM_001025243	chrX,chrX,chrX,chrX,chrX	-,-,+,-,-	MIR718,IRAK1,MIR3202-1,IRAK1,IRAK1	-659,-757,-39602,-757,-757
chr5:68530798-68532569	chr5	+	68530802	68532309	True	NM_176816,NM_001799	chr5,chr5	-,+	CCDC125,CDK7	84152,-231
chr1:180884796-180885225	chr1	+	180884800	180885222	True	NM_020950,NM_005819	chr1,chr1	+,-	KIAA1614,STX6	-2538,106874
chr2:23692746-23693698	chr2	+	23692746	23693652	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	456332,-84499
chr15:89438741-89439230	chr15	+	89438889	89438983	True	NM_178232,NM_013227	chr15,chr15	-,+	HAPLN3,ACAN	-119,-92266
chr7:44654723-44656621	chr7	+	44654752	44656132	True	NM_182547,NM_001003941,NM_001165036,NM_002541	chr7,chr7,chr7,chr7	-,+,+,+	TMED4,OGDH,OGDH,OGDH	-32925,-8689,-8689,-8689
chr2:158140060-158142018	chr2	+	158140287	158141978	True	NM_014568,NM_020711	chr2,chr2	+,-	GALNT5,ERMN	-25998,40488
chr17:61903826-61904080	chr17	+	61903878	61904088	True	NM_002805,NM_001199163,NM_017647	chr17,chr17,chr17	+,+,-	PSMC5,PSMC5,FTSJ3	681,955,993
chr13:27742572-27743162	chr13	+	27742575	27743116	True	NM_000982,NM_182488	chr13,chr13	+,-	RPL21,USP12	82575,2968
chr4:128891666-128892257	chr4	+	128891767	128891831	True	NM_001039717,NM_152778	chr4,chr4	+,-	C4orf29,MFSD8	-5366,-4628
chr3:129722398-129722993	chr3	+	129722470	129722996	True	NM_007117,NR_024252	chr3,chr3	+,-	TRH,LOC729375	-29407,107330
chr19:49244317-49244569	chr19	+	49244365	49244603	True	NM_019113,NM_017805,NM_182575	chr19,chr19,chr19	+,-,-	FGF21,RASIP1,IZUMO1	14740,-395,5613
chr3:56599853-56601139	chr3	+	56600079	56601019	True	NR_024460,NM_015576,NM_015224,NM_001141947,NM_001012506	chr3,chr3,chr3,chr3,chr3	+,-,-,+,+	CCDC66,ERC2,C3orf63,CCDC66,CCDC66	-8946,-97688,97114,-8946,-8946
chr13:25336430-25337499	chr13	+	25336637	25337288	True	NM_018451,NM_001184993,NM_031277	chr13,chr13,chr13	-,+,+	CENPJ,RNF17,RNF17	159850,1012,1012
chr3:49205519-49206694	chr3	+	49205637	49206465	True	NM_173546,NM_022903	chr3,chr3	+,-	KLHDC8B,CCDC71	2552,-1852
chr18:53617135-53617616	chr18	+	53617297	53617633	True	NM_003199,NM_015285	chr18,chr18	-,+	TCF4,WDR7	-361437,700982
chr12:82751901-82752145	chr12	+	82751903	82752191	True	NM_032230,NM_014167,NR_033192	chr12,chr12,chr12	+,-,-	C12orf26,CCDC59,CCDC59	84,58,443
chr10:106029024-106029817	chr10	+	106029112	106029713	True	NM_001191013,NM_183239,NM_001191015,NM_001191014,NM_025145	chr10,chr10,chr10,chr10,chr10	+,+,+,+,-	GSTO2,GSTO2,GSTO2,GSTO2,WDR96	-534,-534,5173,5173,-36992
chr13:28560587-28560938	chr13	+	28560715	28560935	True	NM_001105577,NR_002162	chr13,chr13	-,+	PRHOXNB,ATP5EP2	1889,-41430
chr3:133475739-133476210	chr3	+	133475742	133476144	True	NM_001063,NM_007027	chr3,chr3	+,-	TF,TOPBP1	-10816,-95005
chr16:70486455-70487165	chr16	+	70486582	70487018	True	NM_145059,NM_006927	chr16,chr16	+,-	FUK,ST3GAL2	1479,-13591
chr5:37837158-37837506	chr5	+	37837228	37837420	True	NM_152403,NM_000514,NM_001190469,NM_001190468,NM_199231	chr5,chr5,chr5,chr5,chr5	+,-,-,-,-	EGFLAM,GDNF,GDNF,GDNF,GDNF	421112,2412,-1299,-1299,-1635
chr10:111968196-111968522	chr10	+	111968195	111968383	True	NM_001008541,NM_005871,NM_130439	chr10,chr10,chr10	+,-,+	MXI1,SMNDC1,MXI1	1605,96374,-883
chr19:1350778-1351371	chr19	+	1350967	1351409	True	NR_024247,NM_000156,NM_032853	chr19,chr19,chr19	+,-,+	MUM1,GAMT,MUM1	4913,50193,3566
chr6:168198220-168198460	chr6	+	168198224	168198488	True	NR_026773,NM_001040000	chr6,chr6	-,+	C6orf123,MLLT4	-685,29182
chr3:9848130-9848536	chr3	+	9848147	9848461	True	NR_037162,NM_133480,NM_001025930	chr3,chr3,chr3	+,-,+	TTLL3,TADA3,TTLL3	3182,-13727,3182
chr22:29711989-29713832	chr22	+	29712067	29713682	True	NM_006478,NM_152236,NM_152237,NM_001007279,NM_006477	chr22,chr22,chr22,chr22,chr22	+,+,+,-,-	GAS2L1,GAS2L1,GAS2L1,RASL10A,RASL10A	-9121,-9121,-9121,-319,-319
chrX:49458455-49459727	chrX	+	49458547	49459544	True	NM_003785,NM_001468	chrX,chrX	-,+	PAGE1,GAGE1	1103,-94983
chr1:152748250-152748524	chr1	+	152748250	152748552	True	NM_178351,NM_178354	chr1,chr1	-,+	LCE1C,LCE1F	30605,295
chrX:46615179-46616890	chrX	+	46615276	46616785	True	NM_032591,NM_006915	chrX,chrX	-,+	SLC9A7,RP2	1738,79561
chr10:116698308-116700173	chr10	+	116698472	116700222	True	NM_139169,NM_001003408	chr10,chr10	+,-	TRUB1,ABLIM1	-571,-254058
chr17:10431451-10432271	chr17	+	10431764	10432057	True	NM_005963,NM_020233	chr17,chr17	-,+	MYH1,C17orf48	-9905,168869
chr1:223529090-223529892	chr1	+	223529092	223529678	True	NM_017982,NM_152610,NM_001037175	chr1,chr1,chr1	-,+,-	SUSD4,C1orf65,SUSD4	7930,37036,7930
chr11:65336923-65337217	chr11	+	65336927	65337203	True	NM_001099409,NM_006396,NM_152832,NM_021070,NM_001098785,NM_001098784	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,-,+,+	EHBP1L1,SSSCA1,FAM89B,LTBP3,FAM89B,FAM89B	6305,739,2616,-11228,2616,2616
chr5:179636317-179636527	chr5	+	179636318	179636568	True	NM_015455,NM_175062	chr5,chr5	+,-	CNOT6,RASGEF1C	284848,-188
chrX:70501913-70502294	chrX	+	70501913	70502347	True	NM_007363,NM_001171162,NM_001145410,NM_001145409,NM_001145408	chrX,chrX,chrX,chrX,chrX	+,-,+,+,+	NONO,ZMYM3,NONO,NONO,NONO	694,-26866,694,694,694
chr14:74554041-74555767	chr14	+	74554295	74555734	True	NM_005589,NM_001024674	chr14,chr14	-,+	ALDH6A1,LIN52	-3099,-2699
chr1:207669875-207670785	chr1	+	207670044	207670822	True	NR_029832,NM_000651,NM_000573	chr1,chr1,chr1	-,+,+	MIR29C,CR1,CR1	304512,-622,-622
chr7:50629171-50630584	chr7	+	50629212	50630288	True	NM_000790,NM_001082971,NR_033845	chr7,chr7,chr7	-,-,+	DDC,DDC,LOC100129427	-444,2916,-29806
chr6:30906625-30907644	chr6_qbl_hap6	+	2199683	2200404	False	NM_205854,NM_080870	chr6_qbl_hap6,chr6_qbl_hap6	-,+	SFTA2,DPCR1	-6760,1345
chr6:30906625-30907644	chr6_mcf_hap5	+	2288651	2289372	False	NM_205854,NM_080870	chr6_mcf_hap5,chr6_mcf_hap5	-,+	SFTA2,DPCR1	-6760,1345
chr6:30906625-30907644	chr6_cox_hap2	+	2418622	2419344	False	NM_205854,NM_080870	chr6_cox_hap2,chr6_cox_hap2	-,+	SFTA2,DPCR1	-6747,1345
chr6:30906625-30907644	chr6	+	30906711	30907431	True	NM_205854,NM_080870	chr6,chr6	-,+	SFTA2,DPCR1	-6759,1345
chr6:30906625-30907644	chr6_dbb_hap3	+	2200826	2201547	False	NM_205854,NM_080870	chr6_dbb_hap3,chr6_dbb_hap3	-,+	SFTA2,DPCR1	-6764,1345
chr19:48256420-48257254	chr19	+	48256757	48257159	True	NM_015710,NM_198479,NR_003048	chr19,chr19,chr19	+,-,+	GLTSCR2,TPRX1,SNORD23	-8015,49752,1950
chr2:214015375-214016336	chr2	+	214015547	214016303	True	NM_016260,NM_001079526,NM_001025436	chr2,chr2,chr2	-,-,+	IKZF2,IKZF2,SPAG16	-489,81,132812
chr1:214724077-214724308	chr1	+	214724175	214724357	True	NM_016343,NM_005401	chr1,chr1	+,-	CENPF,PTPN14	52174,717
chr1:10491302-10491833	chr1	+	10491306	10491641	True	NM_198544,NM_004401,NR_036462,NM_199294,NM_199006,NR_037187,NR_037186	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,-,+,+,+,+,+	APITD1-CORT,DFFA,APITD1,APITD1,APITD1-CORT,APITD1-CORT,APITD1-CORT	-1198,41023,-553,-1198,-1198,-553,-553
chr10:100995486-100995868	chr10	+	100995531	100995650	True	NM_021828,NM_001166246,NM_020348,NM_001166244,NM_001166245	chr10,chr10,chr10,chr10,chr10	-,-,+,-,-	HPSE2,HPSE2,CNNM1,HPSE2,HPSE2	33,33,93205,33,33
chr9:67921700-67923597	chr9	+	67921879	67923385	True	NR_027422,NM_001012419,NM_032250	chr9,chr9,chr9	-,+,+	FAM27B,ANKRD20A3,ANKRD20A1	-127690,3375,3375
chr9:67921700-67923597	chr9	+,-	44121195	44122006	False	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	-490465,-436377
chr9:67921700-67923597	chr9	+,-	42364322	42365738	False	NR_003670,NM_001012419,NM_001012421	chr9,chr9,chr9	-,+,+	KGFLP2,ANKRD20A3,ANKRD20A2	-344738,2564,2564
chr9:67921700-67923597	chr9	+,-	43136171	43137125	False	NM_001012419,NR_026558,NR_027472,NM_001012421	chr9,chr9,chr9,chr9	-,+,-,-	ANKRD20A3,AQP7P3,LOC642929,ANKRD20A2	-2627,-278086,8409,-2627
chr9:67921700-67923597	chr9	-	67924067	67924133	False	NR_027422,NM_001012419,NM_032250	chr9,chr9,chr9	-,+,+	FAM27B,ANKRD20A3,ANKRD20A1	-129878,2627,2627
chr9:67921700-67923597	chr9	+,-	69377946	69379353	False	NM_001085457,NM_001098805	chr9,chr9	-,+	CBWD6,ANKRD20A4	-115353,2627
chr16:3260316-3261360	chr16	+	3260316	3261369	True	NM_012360,NM_001145447,NR_002169	chr16,chr16,chr16	+,-,+	OR1F1,ZNF200,OR1F2P	-6124,23868,4192
chr2:225847184-225848603	chr2	+	225847323	225848631	True	NM_014689,NM_020864	chr2,chr2	-,+	DOCK10,KIAA1486	58749,416970
chr4:38862542-38864509	chr4	+	38862793	38863863	True	NM_006068,NM_138389,NR_030300,NR_033290	chr4,chr4,chr4,chr4	-,+,+,+	TLR6,FAM114A1,MIR574,FAM114A1	-4355,5490,5789,5490
chr8:124898585-124899548	chr8	+	124898646	124899405	True	NM_004306,NM_001039112	chr8,chr8	-,+	ANXA13,FER1L6	-148999,-34470
chr12:16067088-16067868	chr12	+	16067424	16067636	True	NM_004447,NM_015954	chr12,chr12	-,+	EPS8,DERA	-124914,-3289
chr2:226310819-226312756	chr2	+	226311474	226312515	True	NM_014689,NM_020864	chr2,chr2	-,+	DOCK10,KIAA1486	-404144,-45923
chr22:30820514-30821441	chr22	+	30820587	30821330	True	NM_001017981,NM_001003704,NM_016498	chr22,chr22,chr22	-,+,+	RNF215,MTFP1,MTFP1	-37285,280,280
chr17:79869808-79870013	chr17	+	79869813	79869973	True	NM_016538,NM_002861,NM_148896,NM_001184917,NR_033682,NR_033683,NR_033681,NR_033685	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,-,-,-,-,-	SIRT7,PCYT2,NPB,PCYT2,PCYT2,PCYT2,PCYT2,PCYT2	6135,-473,-9794,-473,-473,-736,-473,-736
chr11:10475427-10476209	chr11	+	10475542	10476234	True	NM_001025390,NM_001025389,NM_000480,NM_001172430,NM_001172431,NM_001190702	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,-	AMPD3,AMPD3,AMPD3,AMPD3,AMPD3,MTRNR2L8	1246,431,-3375,6443,-3731,54543
chr17:72241920-72243243	chr17	+	72241926	72242830	True	NR_026914,NM_052869	chr17,chr17	-,+	MGC16275,TTYH2	-32466,1674
chr5:131823636-131825103	chr5	+	131823685	131825050	True	NM_005732,NM_002198	chr5,chr5	+,-	RAD50,IRF1	67565,1466
chr3:183738474-183738898	chr3	+	183738543	183738841	True	NM_182537,NM_001023587,NM_005688	chr3,chr3,chr3	+,-,-	HTR3D,ABCC5,ABCC5	10490,-2816,-2816
chr16:11875267-11875720	chr16	+	11875275	11875695	True	NM_003498,NM_014153	chr16,chr16	+,-	SNN,ZC3H7A	-113037,15482
chr16:30126070-30126278	chr16	+	30126097	30126283	True	NR_027081,NM_024307,NM_002746,NM_001040056,NM_001109891	chr16,chr16,chr16,chr16,chr16	+,-,-,-,-	LOC100271831,GDPD3,MAPK3,MAPK3,MAPK3	-715,-1219,8397,8397,8397
chr9:130677720-130678166	chr9	+	130677761	130678125	True	NM_175039,NM_001018078,NM_175040	chr9,chr9,chr9	-,+,-	ST6GALNAC4,FPGS,ST6GALNAC4	1230,-112311,1230
chr13:51685812-51686042	chr13	+	51685842	51686068	True	NR_003923,NM_145019	chr13,chr13	-,+	GUCY1B2,FAM124A	-45549,110438
chr17:18571451-18572533	chr6	-	109002818	109002868	False	NR_033376,NM_001199934	chr6,chr6	+,-	NCRNA00222,SESN1	69988,327373
chr17:18571451-18572533	chr17	+	18571540	18572398	True	NM_001037330,NR_026718	chr17,chr17	+,-	TRIM16L,FOXO3B	53003,4146
chr1:24440313-24440785	chr1	+	24440497	24440821	True	NM_152372,NR_027087	chr1,chr1	-,+	MYOM3,LOC284632	-1832,85908
chr21:35897610-35898336	chr21	+	35897664	35898355	True	NM_053277,NM_203418	chr21,chr21	+,-	CLIC6,RCAN1	143332,971
chr15:90808500-90808858	chr15	+	90808649	90808867	True	NM_001033088,NR_028052,NM_006384	chr15,chr15,chr15	+,+,-	NGRN,NGRN,CIB1	27,27,-31370
chr2:7055604-7057045	chr2	+	7055749	7056987	True	NR_033997,NM_014746	chr2,chr2	-,+	LOC386597,RNF144A	1886,535
chr9:35764360-35766119	chr9	+	35764359	35765780	True	NM_001080496,NM_001044264	chr9,chr9	+,-	RGP1,MSMP	-15140,-10085
chr3:127692569-127693492	chr3	+	127692640	127693473	True	NM_207335,NM_003707	chr3,chr3	+,-	KBTBD12,RUVBL1	-50789,149249
chr19:1450547-1451744	chr19	+	1450837	1451769	True	NM_152482,NM_005883	chr19,chr19	-,+	C19orf25,APC2	27509,-740
chr20:57768658-57769550	chr20	+	57768839	57769329	True	NR_037930,NM_178457	chr20,chr20	-,+	SLMO2-ATP5E,ZNF831	-150938,-2815
chr2:131328087-131328421	chr2	+	131328096	131328220	True	NR_027313,NR_033930,NR_027314	chr2,chr2,chr2	+,+,+	LOC150527,LOC646743,LOC150527	198,181,201
chr2:131328087-131328421	chr2	-	131307669	131307793	False	NR_027313,NR_033930,NR_027314	chr2,chr2,chr2	-,-,-	LOC150527,LOC646743,LOC150527	-198,-181,-201
chr3:10054162-10054696	chr3	+	10054167	10054663	True	NM_001008737,NM_033084	chr3,chr3	-,+	LOC401052,FANCD2	-1388,13449
chr2:132201491-132201734	chr2	+	132201542	132201688	True	NR_002826,NM_080386	chr2,chr2	-,+	LOC401010,TUBA3D	829,31977
chr2:152266911-152267214	chr2	+	152267004	152267180	True	NM_004688,NM_001177663,NM_018151,NM_001177664,NM_001177665	chr2,chr2,chr2,chr2,chr2	-,+,+,+,+	NMI,RIF1,RIF1,RIF1,RIF1	-120574,-658,-658,-655,-451
chr16:29973861-29974437	chr16	+	29973920	29974314	True	NM_001083613,NM_003609,NM_194280	chr16,chr16,chr16	+,-,+	TMEM219,HIRIP3,TMEM219	-620,33148,-620
chr10:119634599-119636011	chr10	+	119634631	119635818	True	NM_014904,NR_026941	chr10,chr10	-,+	RAB11FIP2,CASC2	170357,170513
chr4:123300070-123300454	chr4	+	123300069	123300481	True	NM_000586,NM_139243,NM_001159295,NM_001159285	chr4,chr4,chr4,chr4	-,+,+,+	IL2,ADAD1,ADAD1,ADAD1	77219,0,113,113
chr13:19523456-19523773	chr13	+	19523502	19523772	True	NR_027995,NR_026852	chr13,chr13	-,+	LOC284232,LOC348021	-77393,58626
chr20:23326300-23326933	chr20	+	23326516	23326960	True	NM_013248,NM_022080	chr20,chr20	+,-	NXT1,NAPB	4412,75246
chr15:45406287-45406584	chr15	+	45406329	45406615	True	NM_207581,NM_014080	chr15,chr15	+,-	DUOXA2,DUOX2	-41,30
chr19:7909651-7910063	chr19	+	7909874	7910102	True	NM_001159944,NM_001190467	chr19,chr19	+,-	EVI5L,FLJ22184	1283,29274
chr7:4166073-4167089	chr7	+	4166483	4167116	True	NM_020144,NR_027816	chr7,chr7	-,+	PAPOLB,SDK1	734559,2200
chr6:15024294-15024839	chr6	+	15024724	15024804	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	221722,638545
chr5:134315392-134316900	chr5	+	134315414	134316525	True	NM_002653,NM_178019	chr5,chr5	-,+	PITX1,CATSPER3	53492,-11869
chr15:23033617-23034038	chr15	+	23033620	23034079	True	NM_001008892,NM_001184888,NM_030922,NM_001008860,NM_001008894,NM_001033028,NM_001184889	chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,-,-,-,+,-	NIPA2,NIPA2,NIPA2,NIPA2,NIPA2,CYFIP1,NIPA2	398,398,398,398,398,-77929,398
chr7:150022344-150023168	chr7	+	150022494	150023150	True	NM_001142928,NM_138434,NM_001164458,NM_023942	chr7,chr7,chr7,chr7	+,+,-,+	LRRC61,C7orf29,ACTR3C,LRRC61	-2249,3787,-1736,-2249
chr20:30134132-30134992	chr20	+	30134158	30135025	True	NM_001037500,NR_003677	chr20,chr20	-,+	DEFB124,PSIMCT-1	-73342,159
chr17:43128317-43128822	chr17	+	43128377	43128779	True	NM_021079,NM_001128631,NM_024819	chr17,chr17,chr17	+,-,-	NMT1,DCAKD,DCAKD	9900,249,9744
chr2:173293013-173293540	chr2	+	173293093	173293494	True	NR_026995,NM_000210,NM_001079818	chr2,chr2,chr2	-,+,+	LOC91149,ITGA6,ITGA6	307490,-830,-830
chr10:101380299-101380764	chr10	+	101380301	101380709	True	NM_020354,NM_031212	chr10,chr10	+,-	ENTPD7,SLC25A28	38553,-80
chr1:27953397-27955085	chr1	+	27953743	27955131	True	NM_001042747,NM_001042729,NM_005248,NM_001143912	chr1,chr1,chr1,chr1	-,-,-,+	FGR,FGR,FGR,FAM76A	-992,-637,6646,97358
chr12:27165992-27166867	chr12	+	27166007	27166835	True	NM_004264,NM_016551	chr12,chr12	+,-	MED21,TM7SF3	8647,554
chr22:43044069-43044553	chr22	+	43044132	43044598	True	NM_001171660,NM_001171661,NM_001129819,NM_000398,NM_007326,NR_029422,NM_001165877	chr22,chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,-,+,-	CYB5R3,CYB5R3,CYB5R3,CYB5R3,CYB5R3,RNU12,ATP5L2	-3492,-1137,-1137,857,-1137,-32932,-7525
chr12:27397606-27398383	chr12	+	27397692	27398422	True	NM_001080406,NM_015000	chr12,chr12	-,+	C12orf71,STK38L	-162237,-667
chr1:92951907-92952125	chr1	+	92951911	92952015	True	NM_001127216,NM_001127215,NM_024813,NM_005263	chr1,chr1,chr1,chr1	-,-,+,-	GFI1,GFI1,RPAP2,GFI1	-283,-2555,-187448,468
chr5:150131022-150132720	chr5	+	150131075	150132395	True	NM_032947,NM_001135644,NM_001135643,NM_016221	chr5,chr5,chr5,chr5	+,-,-,-	C5orf62,DCTN4,DCTN4,DCTN4	25112,5747,6322,6322
chr15:85142960-85143274	chr15	+	85143060	85143207	True	NM_017894,NM_001007072,NM_181877,NR_003661	chr15,chr15,chr15,chr15	+,+,+,-	ZSCAN2,ZSCAN2,ZSCAN2,UBE2Q2P1	1041,1041,1041,-29034
chr18:61450718-61452519	chr18	+	61450731	61452494	True	NM_003784,NM_006919	chr18,chr18	+,-	SERPINB7,SERPINB3	-8180,-121534
chr7:21625124-21626856	chr7	+	21625425	21626876	True	NM_003777,NM_001127370	chr7,chr7	+,-	DNAH11,CDCA7L	-42658,358717
chr21:27102687-27104019	chr21	+	27102686	27104065	True	NM_001003701,NM_002040,NM_001003703,NM_001003697,NM_001003696,NM_001197297,NM_001685	chr21,chr21,chr21,chr21,chr21,chr21,chr21	-,+,-,-,-,+,-	ATP5J,GABPA,ATP5J,ATP5J,ATP5J,GABPA,ATP5J	3956,3263,3956,3956,3956,3192,3956
chr4:48897104-48898020	chr4	+	48897113	48897725	True	NM_001014446,NM_001168254	chr4,chr4	-,+	OCIAD2,OCIAD1	11148,-63842
chr17:15522745-15524286	chr17	+	15522820	15524064	True	NM_006382,NM_001130842	chr17,chr17	-,+	CDRT1,ZNF286A	-136,78826
chr10:44061117-44062396	chr10	+	44061472	44062402	True	NM_005674,NM_001099283,NM_001099282,NM_145312,NM_001099284	chr10,chr10,chr10,chr10,chr10	-,-,-,+,-	ZNF239,ZNF239,ZNF239,ZNF485,ZNF239	1557,7716,7715,39452,7716
chr1:27695680-27696216	chr1	+	27695814	27696154	True	NM_003665,NM_005281,NM_004672,NM_173452	chr1,chr1,chr1,chr1	-,+,-,-	FCN3,GPR3,MAP3K6,FCN3	5211,22997,-2477,5211
chr2:32502998-32503203	chr2	+	32503074	32503236	True	NM_032312,NM_021209	chr2,chr2	+,-	YIPF4,NLRC4	-167,-12262
chr12:6876412-6876623	chr12	+	6876487	6876621	True	NM_002286,NR_026581,NM_002824	chr12,chr12,chr12	+,-,+	LAG3,MLF2,PTMS	5048,-13851,-999
chr1:150581779-150582868	chr1	+	150581821	150582553	True	NM_207045,NR_036211	chr1,chr1	-,+	ENSA,MIR4257	19106,-57467
chr12:45616102-45617019	chr12	+	45616276	45616874	True	NM_001142679,NR_037144,NM_001025356,NM_001142680,NM_001204803	chr12,chr12,chr12,chr12,chr12	+,-,+,+,+	ANO6,PLEKHA8P1,ANO6,ANO6,ANO6	-6566,-6487,-6566,-6460,-6566
chr8:142350525-142351008	chr8	+	142350619	142351035	True	NR_024441,NM_005293	chr8,chr8	+,-	LOC731779,GPR20	-22,26380
chr22:37215633-37217128	chr22	+	37215980	37217118	True	NM_000631,NM_002854	chr22,chr22	+,-	NCF4,PVALB	39911,-463
chr19:51333842-51334888	chr19	+	51333962	51334876	True	NM_138564,NM_001030050,NM_002257,NM_138563,NM_017509	chr19,chr19,chr19,chr19,chr19	-,+,-,-,-	KLK15,KLK3,KLK1,KLK15,KLK15	-47,23294,-6919,-47,-47
chr19:15222085-15222524	chr19	+	15222119	15222477	True	NM_006844,NM_033025	chr19,chr19	-,+	ILVBL,SYDE1	14150,-3956
chr20:57463019-57463263	chr20	+	57463049	57463309	True	NM_001077489,NM_001077488,NM_000516,NR_002785,NR_003259,NM_080426	chr20,chr20,chr20,chr20,chr20,chr20	+,+,+,-,+,+	GNAS,GNAS,GNAS,GNAS-AS1,GNAS,GNAS	3116,3116,3116,-37091,870,3116
chr3:93698233-93698742	chr3	+	93698377	93698786	True	NM_144996,NM_000313,NM_182896,NM_001174151,NM_001174150,NR_033427	chr3,chr3,chr3,chr3,chr3,chr3	+,-,+,+,+,+	ARL13B,PROS1,ARL13B,ARL13B,ARL13B,ARL13B	196,-5443,196,196,196,196
chr19:11268265-11268878	chr19	+	11268306	11268591	True	NM_001195803,NM_182513	chr19,chr19	+,-	LDLR,SPC24	-68320,-1822
chr1:104695968-104696199	chr1	+	104695994	104696220	True	NM_001008221,NR_033990	chr1,chr1	-,+	AMY1A,LOC100129138	-456921,-80400
chr5:115178528-115180211	chr5	+	115178528	115180061	True	NM_001284,NR_033362,NR_033363,NM_004707	chr5,chr5,chr5,chr5	+,-,-,-	AP3S1,ATG12,ATG12,ATG12	-960,-980,-980,-980
chr3:50240374-50240883	chr3	+	50240547	50240899	True	NM_006764,NM_006841	chr3,chr3	-,+	IFRD2,SLC38A3	89177,1792
chr1:226128784-226129637	chr1	+	226129120	226129556	True	NM_003240,NM_000120,NM_001172425	chr1,chr1,chr1	-,+,-	LEFTY2,EPHX1,LEFTY2	-37,-116171,-37
chr6:36515275-36517268	chr6	+	36515483	36516661	True	NM_003017,NM_007271	chr6,chr6	+,-	SRSF3,STK38	45428,-236
chr5:126851859-126852331	chr5	+	126851858	126852066	True	NM_130809,NM_001164478	chr5,chr5	+,-	PRRC1,FLJ44606	1242,-442674
chrX:2670253-2670822	chrY	+	2620339	2620799	False	NR_003254,NM_003140	chrY,chrY	+,-	XGPY2,SRY	-53,35045
chrX:2670253-2670822	chrY	-	14618687	14619147	False	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	155150,-85298
chrX:2670253-2670822	chrX	+	2670339	2670799	True	NM_001141919,NM_001141920,NR_003254,NR_037842,NM_175569	chrX,chrX,chrX,chrX,chrX	+,+,+,-,+	XG,XG,XGPY2,NCRNA00102,XG	-297,-297,-53,-136951,-297
chr16:89769300-89770581	chr16	+	89769455	89770307	True	NR_036480,NM_152339	chr16,chr16	+,-	LOC100128881,SPATA2L	7956,-1334
chrX:119026844-119027087	chrX	+	119026852	119027043	True	NM_178813,NM_006978,NM_001008535,NM_001008534	chrX,chrX,chrX,chrX	+,-,+,+	AKAP14,RNF113A,AKAP14,AKAP14	2892,-21061,2892,2892
chr3:49759487-49760115	chr3	+	49759551	49760125	True	NM_013334,NM_198722,NM_021971,NM_022064	chr3,chr3,chr3,chr3	-,-,-,+	GMPPB,AMIGO3,GMPPB,RNF123	1309,-2313,1309,-32612
chr3:37037065-37038189	chr3	+	37037234	37038230	True	NM_001167617,NM_014805,NM_000249,NM_001167618,NM_001167619	chr3,chr3,chr3,chr3,chr3	+,-,+,+,+	MLH1,EPM2AIP1,MLH1,MLH1,MLH1	-2025,-2439,-2452,-2025,-2025
chr17:71188648-71188925	chr17	+	71188810	71188946	True	NM_018714,NM_001098832	chr17,chr17	+,-	COG1,FAM104A	226,39637
chr19:55587406-55587839	chr19	+	55587720	55587834	True	NM_133180,NM_138412,NM_017729	chr19,chr19,chr19	+,-,+	EPS8L1,RDH13,EPS8L1	-550,-6806,3925
chr10:99446964-99447174	chr10	+	99446967	99447153	True	NM_021732,NM_031484	chr10,chr10	-,+	AVPI1,MARVELD1	0,26311
chr18:12657515-12657754	chr18	+	12657577	12657745	True	NM_020148,NM_001128626,NM_001128627,NM_147163	chr18,chr18,chr18,chr18	-,-,-,+	SPIRE1,SPIRE1,SPIRE1,PSMG2	217,217,-846,992
chr11:66046568-66047098	chr11	+	66046691	66047095	True	NM_020470,NM_182553	chr11,chr11	-,+	YIF1A,CNIH2	9593,-1046
chr6:94126689-94126971	chr6	+	94126810	94126918	True	NR_015362,NM_004440	chr6,chr6	+,-	TSG1,EPHA7	289882,2432
chr15:90039846-90041342	chr15	+	90040214	90040934	True	NM_016321,NM_152259	chr15,chr15	-,+	RHCG,C15orf42	-415,77883
chr17:33312395-33313127	chr17	+	33312460	33313178	True	NM_006584,NM_013975,NM_002311	chr17,chr17,chr17	-,+,+	CCT6B,LIG3,LIG3	-23932,-4994,-4994
chr6:119463425-119464036	chr6	+	119463429	119463833	True	NM_001100411,NM_014034	chr6,chr6	-,+	FAM184A,ASF1A	6575,-248239
chr17:204824-205228	chr17	+	204875	205259	True	NM_001190412,NM_001190413,NM_001190411,NM_001013672,NM_006987	chr17,chr17,chr17,chr17,chr17	-,-,-,+,-	RPH3AL,RPH3AL,RPH3AL,C17orf97,RPH3AL	-2242,-2242,-2242,54858,-2242
chr1:108508977-108509861	chr1	+	108509257	108509719	True	NM_001143987,NM_006113	chr1,chr1	+,-	NBPF6,VAV3	483184,-1712
chr10:95517560-95518166	chr10	+	95517582	95518110	True	NM_005097,NM_145246	chr10,chr10	+,-	LGI1,FRA10AC1	-67,-55253
chr14:91314330-91315577	chr14	+	91314385	91315591	True	NM_001010854,NM_001102366	chr14,chr14	-,+	TTC7B,C14orf159	-31624,264765
chr16:30834434-30835530	chr16	+	30834740	30835556	True	NM_001080417,NM_014771	chr16,chr16	-,+	ZNF629,RNF40	-36217,-61166
chr5:177580759-177581033	chr5	+	177580888	177580998	True	NM_022762,NM_017838,NM_001034833	chr5,chr5,chr5	+,-,-	RMND5B,NHP2,NHP2	-22911,13,13
chr7:6657278-6658829	chr7	+	6657363	6658620	True	NM_017560,NM_001145118	chr7,chr7	+,-	ZNF853,GRID2IP	-1887,-66296
chr8:87130022-87130380	chr8	+	87130026	87130208	True	NM_152565,NM_033126	chr8,chr8	+,-	ATP6V0D2,PSKH2	-18938,-48175
chr17:36606401-36608129	chr17	+	36606522	36608087	True	NM_001004334,NM_001199417	chr17,chr17	-,+	GPR179,ARHGAP23	-106829,-21853
chr1:161640572-161641260	chr1	+	161640620	161641056	True	NM_004001,NM_001002273,NM_001190828,NM_001002274,NM_001002275,NR_002595	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-	FCGR2B,FCGR2B,FCGR2B,FCGR2B,FCGR2B,RPL31P11	-7766,-7766,-7766,-7766,-7766,14036
chr1:161640572-161641260	chr1	+	161558790	161559226	False	NM_201563,NM_001127596	chr1,chr1	+,-	FCGR2C,FCGR3A	-7712,-38377
chr19:46717578-46717784	chr19	+	46717581	46717757	True	NR_027003,NM_207393	chr19,chr19	+,-	DKFZp434J0226,IGFL3	-4133,-89650
chr1:187503280-187503608	chr1	+	187503462	187503616	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-853903,-705489
chr1:201479707-201481358	chr1	+	201480000	201481169	True	NM_001193570,NM_001193571,NR_026667,NM_004078	chr1,chr1,chr1,chr1	-,-,+,-	CSRP1,CSRP1,RPS10P7,CSRP1	-3613,-4033,7862,-3613
chr7:127012388-127014056	chr7	+	127013138	127013919	True	NM_001662,NM_176814	chr7,chr7	+,-	ARF5,ZNF800	214486,18906
chr17:7329850-7330161	chr17	+	7329868	7330114	True	NM_152766,NM_199339,NM_175734,NM_178518	chr17,chr17,chr17,chr17	-,+,+,+	C17orf61,SPEM1,C17orf74,TMEM102	-22418,-6240,-984,8647
chr1:115625974-115627085	chr1	+	115626046	115627096	True	NM_000549,NM_005725	chr1,chr1	+,-	TSHB,TSPAN2	-53682,5075
chr7:66462093-66462774	chr7	+	66462108	66462374	True	NM_018264,NM_016038	chr7,chr7	+,-	TYW1,SBDS	-342,-1520
chr11:17743477-17743689	chr11	+	17743503	17743707	True	NM_153676,NM_002478	chr11,chr11	-,+	USH1C,MYOD1	-177540,-2446
chr14:93604314-93605107	chr14	+	93604498	93605044	True	NM_015676,NM_014216	chr14,chr14	+,-	C14orf109,ITPK1	46251,-22235
chr19:4722609-4723375	chr19	+	4722646	4723381	True	NR_027148,NM_139159	chr19,chr19	+,-	C19orf30,DPP9	45735,524
chr2:85194613-85194829	chr2	+	85194612	85194712	True	NM_020122,NM_001080824	chr2,chr2	+,-	KCMF1,C2orf89	3518,-86360
chr10:6344636-6345497	chr10	+	6344641	6345383	True	NM_004566,NM_000417	chr10,chr10	+,-	PFKFB3,IL2RA	-99856,-240308
chr11:46359968-46361000	chr11	+	46360146	46360887	True	NM_001199266,NM_001199267,NM_000741,NM_001199268,NM_201532,NM_201533,NM_003646	chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,-,+,+,+,+	DGKZ,DGKZ,CHRM4,DGKZ,DGKZ,DGKZ,DGKZ	8068,8068,47283,8068,-5742,5929,8068
chr6:88986259-88987501	chr6	+	88986344	88987547	True	NM_030960,NM_016083	chr6,chr6	+,-	SPACA1,CNR1	-228888,-110577
chr7:152124391-152124749	chr7	+	152124566	152124729	True	NR_002935,NM_170606	chr7,chr7	+,-	FABP5P3,MLL3	9250,8430
chr1:1149384-1149627	chr1	+	1149442	1149568	True	NM_004195,NM_148901,NM_148902,NM_003327,NM_080605	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	TNFRSF18,TNFRSF18,TNFRSF18,TNFRSF4,B3GALT6	-7353,-7353,-7353,30,18060
chr17:40083933-40085028	chr17	+	40084489	40084791	True	NM_198830,NM_031421,NM_001096	chr17,chr17,chr17	-,+,-	ACLY,TTC25,ACLY	-9217,2096,-9217
chr6:38691853-38692794	chr6	+	38692134	38692784	True	NM_006708,NM_001371	chr6,chr6	-,+	GLO1,DNAH8	-21182,-1644
chr5:94904698-94906576	chr5	+	94904806	94906333	True	NM_014639,NM_198150	chr5,chr5	-,+	TTC37,ARSK	-14097,-14032
chr3:197356823-197357587	chr3	+	197357037	197357554	True	NR_003266,NM_001011537	chr3,chr3	-,+	LOC220729,FYTTD1	-2285,118869
chr3:197356823-197357587	chr3	-	195382597	195382647	False	NM_001647,NR_003265	chr3,chr3	-,+	APOD,SDHAP2	-71521,2262
chr12:104225644-104226093	chr12	+	104225848	104226139	True	NM_003299,NM_001031701	chr12,chr12	+,-	HSP90B1,NT5DC3	98049,8887
chr8:134104669-134106412	chr8	+	134104840	134106131	True	NM_001045556,NM_001045557,NM_001204869	chr8,chr8,chr8	-,-,+	SLA,SLA,WISP1	9229,9229,97150
chr11:89305808-89306629	chr11	+	89306187	89306265	True	NM_153696,NM_001143837	chr11,chr11	+,-	FOLH1B,NOX4	86199,16564
chrX:12923212-12924027	chrX	+	12923359	12924057	True	NM_138636,NR_030727	chrX,chrX	+,-	TLR8,LOC349408	681,37412
chr2:209118775-209119084	chr2	+	209118774	209118994	True	NM_005896,NM_001178000	chr2,chr2	-,+	IDH1,PIKFYVE	862,11996
chr4:9782247-9782839	chr4	+	9782441	9782831	True	NR_031688,NM_000798	chr4,chr4	-,+	MIR548I2,DRD5	-224504,426
chr20:18576561-18576869	chr20	+	18576643	18576893	True	NM_006606,NM_080820	chr20,chr20	-,+	RBBP9,DTD1	-98756,-8138
chr1:110454061-110454287	chr1	+	110454068	110454252	True	NM_172210,NM_000757,NM_172212,NM_139053,NM_172211	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	CSF1,CSF1,CSF1,EPS8L3,CSF1	-886,-886,-886,-147424,-886
chr19:53071071-53071305	chr19	+	53071112	53071340	True	NM_001172655,NM_018260,NM_001105549	chr19,chr19,chr19	+,+,-	ZNF701,ZNF701,ZNF83	2576,2185,70354
chr9:34708020-34709814	chr9	+	34708255	34709852	True	NM_004512,NM_002989	chr9,chr9	+,-	IL11RA,CCL21	-54374,345
chr6:14774463-14775081	chr6	+	14774625	14775002	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	471524,888337
chr19:50085992-50086847	chr19	+	50086327	50086881	True	NM_015953,NM_000951,NM_020719	chr19,chr19,chr19	-,+,+	NOSIP,PRRG2,PRR12	-2524,-1791,8030
chr19:6478478-6479010	chr19	+	6478791	6479047	True	NM_174881,NM_024898	chr19,chr19	+,-	CRB3,DENND1C	-14582,2801
chr19:47423992-47424478	chr19	+	47424052	47424443	True	NM_021575,NM_004491	chr19,chr19	-,+	AP2S1,GRLF1	-69849,-2172
chr8:100086658-100087501	chr8	+	100086752	100087426	True	NM_152564,NM_006281	chr8,chr8	+,-	VPS13B,STK3	-61317,-248843
chr11:65712547-65712824	chr11	+	65712751	65712825	True	NM_031450,NM_152762	chr11,chr11	-,+	C11orf68,TSGA10IP	-26220,289
chr2:109208409-109209890	chr2	+	109208588	109209688	True	NM_004987,NM_022336,NM_001193488	chr2,chr2,chr2	+,-,+	LIMS1,EDAR,LIMS1	-3879,396198,-3724
chr17:7305709-7306505	chr17	+	7306066	7306538	True	NM_152766,NR_037719,NM_020795,NM_001201576,NM_020360	chr17,chr17,chr17,chr17,chr17	-,-,+,-,-	C17orf61,C17orf61-PLSCR3,NLGN2,PLSCR3,PLSCR3	962,962,4963,-7904,-7904
chr12:54412226-54412436	chr12	+	54412282	54412425	True	NM_022658,NR_003084,NM_014620,NM_004503,NR_003716,NM_153693	chr12,chr12,chr12,chr12,chr12,chr12	+,+,+,+,-,+	HOXC8,HOXC5,HOXC4,HOXC6,HOTAIR,HOXC6	-9443,-1691,-1691,9768,-49767,-1691
chr3:25779328-25780948	chr3	+	25779410	25780967	True	NM_001145391,NM_001145293	chr3,chr3	+,-	OXSM,NGLY1	50595,44072
chr2:191397597-191398369	chr2	+	191397641	191398341	True	NM_001142645,NM_005966	chr2,chr2	-,+	TMEM194B,NAB1	1177,115506
chr5:33891858-33892241	chr5	+	33891897	33892119	True	NM_016568,NM_030955	chr5,chr5	+,-	RXFP3,ADAMTS12	44371,55
chr19:57628661-57630350	chr19	+	57629046	57630242	True	NM_020903,NM_052882	chr19,chr19	+,-	USP29,ZIM3	1266,26381
chr2:211168326-211168545	chr2	+	211168368	211168566	True	NM_079422,NM_001122633	chr2,chr2	-,+	MYL1,CPS1	-29,173839
chr6:31980503-31980999	chr6_mcf_hap5	+	3360785	3360873	False	NR_001284,NM_001128590,NM_032454,NM_032470,NM_007293,NM_004197,NM_000500,NM_001002029	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	-,+,+,-,+,+,+,+	TNXA,CYP21A2,STK19,TNXB,C4A,STK19,CYP21A2,C4B	-141,-5285,488,71,1542,488,-5285,1542
chr6:31980503-31980999	chr6_dbb_hap3	+	3266524	3266612	False	NR_001284,NM_001128590,NM_032454,NM_032470,NM_007293,NM_004197,NM_000500,NM_001002029	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	-,+,+,-,+,+,+,+	TNXA,CYP21A2,STK19,TNXB,C4A,STK19,CYP21A2,C4B	-141,-7633,488,71,1542,488,-7633,1542
chr6:31980503-31980999	chr6_ssto_hap7	+	3313651	3313739	False	NR_001284,NM_001128590,NM_032454,NM_032470,NM_007293,NM_004197,NM_000500,NM_001002029	chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7	-,+,+,-,+,+,+,+	TNXA,CYP21A2,STK19,TNXB,C4A,STK19,CYP21A2,C4B	-141,-6849,488,71,1542,488,-6849,1542
chr6:31980503-31980999	chr6	+	31980941	31981029	True	NR_001284,NM_001128590,NM_032454,NM_032470,NM_007293,NM_004197,NM_000500,NM_001002029	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,+,+,-,+,+,+,+	TNXA,CYP21A2,STK19,TNXB,C4A,STK19,CYP21A2,C4B	-141,-7633,488,71,1542,488,-7633,1542
chr20:33758216-33758556	chr20	+	33758231	33758605	True	NM_006404,NR_026728	chr20,chr20	+,-	PROCR,EDEM2	1168,-23070
chr13:113775640-113776241	chr13	+	113775689	113776203	True	NM_000504,NM_001127202	chr13,chr13	+,-	F10,PCID2	909,86876
chr9:35749245-35749741	chr9	+	35749376	35749773	True	NM_020944,NM_001080496,NM_001044264	chr9,chr9,chr9	-,+,-	GBA2,RGP1,MSMP	-151,-150,4551
chr2:102314431-102314638	chr2	+	102314458	102314606	True	NM_145687,NM_145686,NM_004834,NM_001145664	chr2,chr2,chr2,chr2	+,+,+,-	MAP4K4,MAP4K4,MAP4K4,RFX8	-21,-21,-21,-223293
chr5:95188103-95190032	chr5	+	95188402	95190049	True	NR_026936,NM_002064	chr5,chr5	+,-	C5orf27,GLRX	-528,-29825
chr18:43301300-43303017	chr18	+	43301341	43302987	True	NM_015865,NM_001146037,NM_001146036,NM_020964,NM_001128588	chr18,chr18,chr18,chr18,chr18	+,+,+,-,+	SLC14A1,SLC14A1,SLC14A1,EPG5,SLC14A1	1104,3930,1104,244368,1104
chr1:117298474-117299777	chr1	+	117298882	117299539	True	NM_001767,NM_001542	chr1,chr1	+,-	CD2,IGSF3	-1847,-88568
chr22:37955352-37955677	chr22	+	37955477	37955633	True	NM_152243,NM_006498	chr22,chr22	+,-	CDC42EP1,LGALS2	837,20441
chr16:1539992-1540647	chr16	+	1540047	1540613	True	NM_001013658,NM_016111	chr16,chr16	-,+	PTX4,TELO2	-1579,2738
chr13:79177948-79178604	chr13	+	79177991	79178633	True	NM_006237,NM_144595	chr13,chr13	-,+	POU4F1,SLAIN1	-296,-862752
chr19:8212522-8212813	chr19	+	8212685	8212791	True	NM_024552,NM_032447	chr19,chr19	+,-	LASS4,FBN3	61425,-300
chr15:96866812-96868685	chr15	+	96866876	96868397	True	NR_031715,NR_034095,NM_001145155,NM_001145157,NM_001145156,NM_021005	chr15,chr15,chr15,chr15,chr15,chr15	+,-,+,+,+,+	MIR1469,LOC400456,NR2F2,NR2F2,NR2F2,NR2F2	8092,-996547,759,8171,7396,5713
chr15:25493243-25493921	chr15	+	25493467	25493869	True	NR_003353,NR_003358,NM_130838,NR_003344,NR_003351,NR_003357,NR_003356,NR_003355,NR_003354,NR_003302,NR_003303,NR_003359	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,-,+,+,+,+,+,+,+,+,+	SNORD115-38,SNORD115-43,UBE3A,SNORD115-29,SNORD115-36,SNORD115-42,SNORD115-41,SNORD115-40,SNORD115-39,SNORD115-10,SNORD115-11,SNORD115-44	-8533,475,156834,475,475,-1026,-2893,-4757,-6625,-1026,475,2136
chr5:177303620-177304186	chr5	+	177303658	177304213	True	NR_003615,NM_173663	chr5,chr5	+,-	LOC728554,FAM153A	-1448,-96153
chr5:177303620-177304186	chr5	-	175393654	175394144	False	NM_032361,NM_001008220	chr5,chr5	-,+	THOC3,CPLX2	1452,-95212
chr2:242294542-242294839	chr2	+	242294548	242294866	True	NM_005336,NM_014808	chr2,chr2	-,+	HDLBP,FARP2	-39294,797
chr1:32231406-32231615	chr1	+	32231458	32231552	True	NM_001703,NR_036216,NM_001525	chr1,chr1,chr1	-,-,+	BAI2,MIR4254,HCRTR1	-1810,-7122,-148208
chr17:43509751-43509991	chr17_ctg5_hap1	+	125098	125152	False	NM_001113738,NM_174919,NM_199282	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	+,-,-	ARL17A,ARHGAP27,ARHGAP27	70568,305,-6962
chr17:43509751-43509991	chr17	+	43509973	43510035	True	NR_024435,NM_174919,NM_199282	chr17,chr17,chr17	+,-,-	LOC100133991,ARHGAP27,ARHGAP27	-170466,297,-6961
chr17:43509751-43509991	chr17	+	62777416	62777470	False	NR_026899,NM_138363,NR_027487	chr17,chr17,chr17	-,+,-	LOC146880,CCDC45,LOC146880	697,-274309,202
chr19:46368057-46368263	chr19	+	46368071	46368217	True	NM_004819,NM_004497	chr19,chr19	-,+	SYMPK,FOXA3	-1523,-609
chr11:320312-320938	chr11	+	320412	320941	True	NM_021034,NM_003641	chr11,chr11	-,+	IFITM3,IFITM1	23,-6472
chr19:51107623-51108029	chr19	+	51107793	51107923	True	NR_004384,NM_032298	chr19,chr19	+,-	SNAR-F,SYT3	296,33429
chr10:135149567-135149796	chr10	+	135149567	135149835	True	NM_001145201,NM_015722	chr10,chr10	+,-	PRAP1,CALY	11008,690
chr9:131448469-131449809	chr9	+	131448518	131449616	True	NM_052844,NM_001122821,NM_003011	chr9,chr9,chr9	-,+,+	WDR34,SET,SET	-29389,-2636,1892
chr12:10956853-10957562	chr12	+	10956959	10957462	True	NM_023918,NM_023919,NM_023917,NM_005042	chr12,chr12,chr12,chr12	-,-,-,+	TAS2R8,TAS2R7,TAS2R9,PRH2	2180,-1733,5368,124371
chr11:95520556-95522320	chr11	+	95520776	95522174	True	NM_144664,NM_014679	chr11,chr11	-,+	FAM76B,CEP57	830,1467
chr15:97966803-97967654	chr15	+	97967052	97967701	True	NM_183376,NR_024172	chr15,chr15	+,-	ARRDC4,LOC91948	536231,450008
chr12:123460192-123461281	chr12	+	123460297	123461311	True	NM_203444,NM_024623,NM_018694,NM_001002251,NM_001002252,NM_019625,NM_019624,NM_016638	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,+,+,-,-,+	ABCB9,OGFOD2,ARL6IP4,ARL6IP4,ARL6IP4,ABCB9,ABCB9,ARL6IP4	-545,-994,3568,3568,3568,-9241,-9241,3568
chr17:58753954-58754624	chr17	+	58754372	58754630	True	NM_017679,NM_001099432,NM_006380	chr17,chr17,chr17	+,+,-	BCAS3,BCAS3,APPBP2	541,541,-150792
chr9:85674726-85675751	chr9	+	85674861	85675775	True	NM_152573,NM_001001551	chr9,chr9	-,+	RASEF,C9orf103	2318,562257
chr1:169457066-169457821	chr1	+	169457235	169457869	True	NM_003666,NM_006996	chr1,chr1	+,-	BLZF1,SLC19A2	-120093,-2027
chr18:29600169-29600592	chr18	+	29600352	29600602	True	NM_014939,NM_017831	chr18,chr18	-,+	TRAPPC8,RNF125	-77261,-1958
chr11:60620786-60621250	chr11	+	60620812	60621126	True	NM_004778,NM_024098	chr11,chr11	-,+	GPR44,CCDC86	2368,-11434
chr18:3596451-3597325	chr18	+	3596488	3597324	True	NR_024101,NM_001003809	chr18,chr18	+,-	FLJ35776,DLGAP1	-2440,248022
chr21:42799148-42801061	chr21	+	42799224	42800776	True	NM_002462,NM_001135099,NM_001178046,NM_001144925	chr21,chr21,chr21,chr21	+,-,+,+	MX1,TMPRSS2,MX1,MX1	-1297,79273,-1172,-6755
chr9:15499794-15500287	chr9	+	15499911	15500184	True	NM_173550,NM_021144	chr9,chr9	+,-	C9orf93,PSIP1	52912,10154
chr1:59011089-59011602	chr1	+	59011120	59011590	True	NR_034014,NM_145243	chr1,chr1	+,-	LOC100131060,OMA1	239232,906
chrX:95940577-95941556	chrX	+	95940616	95941595	True	NM_007309,NR_003539,NM_006729	chrX,chrX,chrX	+,-,+	DIAPH2,LOC643486,DIAPH2	-1005,-347715,-1005
chr1:120377170-120377668	chr1	+	120377265	120377601	True	NM_006623,NM_001047980	chr1,chr1	+,-	PHGDH,NBPF7	-122897,10228
chr5:150827424-150827777	chr5	+	150827463	150827735	True	NM_078483,NM_181776	chr5,chr5	+,-	SLC36A1,SLC36A2	-351,-100312
chr2:201729179-201730562	chr2	+	201729297	201730251	True	NR_027856,NM_001162407,NR_027855,NM_001136039,NM_004071	chr2,chr2,chr2,chr2,chr2	-,-,-,+,-	CLK1,CLK1,CLK1,NIF3L1,CLK1	138,-13,138,23798,138
chr19:37958160-37958464	chr19	+	37958167	37958503	True	NM_144694,NM_152484	chr19,chr19	+,-	ZNF570,ZNF569	1478,26
chrX:48214557-48214776	chrX	+	48214580	48214722	True	NM_175711,NM_021014,NM_001034832	chrX,chrX,chrX	-,-,+	SSX3,SSX3,SSX4B	1470,1470,28245
chr18:56703562-56705253	chr18	+	56703669	56705244	True	NR_024021,NM_013435	chr18,chr18	+,-	LOC390858,RAX	-751,235431
chr8:29997022-29997594	chr8	+	29997038	29997568	True	NM_001100916,NM_006571	chr8,chr8	-,+	MBOAT4,DCTN6	4696,16244
chr7:75367848-75368061	chr7	+	75367847	75367921	True	NM_001040456,NM_005338	chr7,chr7	+,-	RHBDD2,HIP1	140395,408
chr13:20807093-20807691	chr13	+	20807218	20807577	True	NM_001110221,NM_001110219,NM_001190965,NM_006783,NM_001110220	chr13,chr13,chr13,chr13,chr13	-,-,+,-,-	GJB6,GJB6,ZMYM2,GJB6,GJB6	-684,-684,-274295,-1846,-684
chr2:231919254-231919911	chr2	+	231919261	231919601	True	NR_033879,NM_002807,NM_001191037,NR_034059	chr2,chr2,chr2,chr2	-,+,+,+	LOC348761,PSMD1,PSMD1,PSMD1	-58514,1976,1976,1976
chr2:160471864-160472067	chr2	+	160471868	160472060	True	NM_013450,NM_022826	chr2,chr2	-,+	BAZ2B,MARCH7	1049,96949
chr1:27187172-27188139	chr1	+	27187678	27188131	True	NM_018066,NM_006142	chr1,chr1	-,+	GPN2,SFN	28789,1501
chr1:161146805-161147072	chr1	+	161146989	161147069	True	NM_001122764,NM_001199874,NM_001199873,NM_003779	chr1,chr1,chr1,chr1	+,-,-,-	PPOX,B4GALT3,B4GALT3,B4GALT3	-10859,739,739,739
chr9:128470565-128471493	chr9	+	128470655	128471357	True	NM_001006621,NM_001006619,NM_024117,NM_001006620,NM_006195,NM_001006617,NM_001006618	chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,-,-,-,+,-,-	MAPKAP1,MAPKAP1,MAPKAP1,MAPKAP1,PBX3,MAPKAP1,MAPKAP1	-1142,-1142,-1142,-1142,38259,-1142,-1142
chr14:24615831-24616321	chr14	+	24615942	24616222	True	NM_017999,NM_016049,NM_002818	chr14,chr14,chr14	+,-,-	RNF31,FAM158A,PSME2	436,-5145,-87
chr2:219128504-219129571	chr2	+	219128549	219129319	True	NM_015488,NM_001077191,NM_001087,NM_170699,NM_001077194,NM_001077399	chr2,chr2,chr2,chr2,chr2,chr2	+,+,-,+,+,+	PNKD,GPBAR1,AAMP,GPBAR1,GPBAR1,PNKD	5795,-2862,5624,-2862,-2862,5795
chr17:27624211-27625501	chr17	+	27624506	27625210	True	NM_005208,NM_020772	chr17,chr17	+,-	CRYBA1,NUFIP2	-50685,-3340
chr11:126867889-126869643	chr11	+	126867967	126869555	True	NM_001161707,NR_036126,NM_032531,NM_006278	chr11,chr11,chr11,chr11	-,-,-,+	KIRREL3,MIR3167,KIRREL3,ST3GAL4	1261,-9529,1261,-641922
chr1:228782866-228783114	chr1	+	228782966	228783120	True	NR_002834,NM_033445,NR_037962	chr1,chr1,chr1	+,-,+	DUSP5P,HIST3H2A,RHOU	-2360,-137406,-2623
chr2:208030302-208030964	chr2	+	208030503	208030928	True	NM_003709,NM_173077	chr2,chr2	-,+	KLF7,CPO	-9,-226276
chr5:137697864-137699394	chr5	+	137697996	137699132	True	NM_022809,NM_016604	chr5,chr5	-,+	CDC25C,KDM3B	-30480,-9762
chrX:119079468-119080673	chrX	+	119079629	119080424	True	NM_024528,NM_178813	chrX,chrX	-,+	NKAP,AKAP14	-1894,-49744
chr17:61101839-61102708	chr17	+	61101843	61102733	True	NM_152598,NM_025185	chr17,chr17	-,+	MARCH10,TANC2	-216138,-14997
chr20:31280709-31281122	chr20	+	31280886	31280996	True	NM_006892,NM_182584	chr20,chr20	+,-	DNMT3B,C20orf203	69194,-41103
chrX:100641598-100641868	chrX	+	100641725	100641903	True	NM_000061,NM_021029,NM_001199974,NM_001199972,NM_001199973	chrX,chrX,chrX,chrX,chrX	-,+,+,+,+	BTK,RPL36A,RPL36A-HNRNPH2,RPL36A,RPL36A-HNRNPH2	-513,3974,3974,3974,3974
chr8:145012525-145012903	chr8	+	145012659	145012861	True	NM_000837,NR_030383,NM_201384,NM_201381,NM_201383,NM_201382	chr8,chr8,chr8,chr8,chr8,chr8	+,-,-,-,-,-	GRINA,MIR661,PLEC,PLEC,PLEC,PLEC	51364,6636,947,6094,3881,5299
chr8:87514948-87516364	chr8	+	87515220	87516383	True	NM_003909,NM_016033	chr8,chr8	+,-	CPNE3,FAM82B	10272,4676
chr2:188239973-188241122	chr2	+	188240021	188241140	True	NM_005795,NM_177454	chr2,chr2	-,+	CALCRL,FAM171B	71931,-681292
chr18:2843836-2844424	chr18	+	2843844	2843976	True	NR_026659,NM_032048	chr18,chr18	-,+	LOC727896,EMILIN2	102695,3051
chr11:111742932-111743791	chr11	+	111743049	111743721	True	NM_138378,NM_001077690,NM_001077691,NM_024740,NM_022761,NM_001077692	chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,+,-	FDXACB1,ALG9,ALG9,ALG9,C11orf1,ALG9	6485,-744,-1045,-744,6226,-1045
chr1:247074195-247075499	chr1	+	247074232	247075480	True	NR_015422,NM_015446	chr1,chr1	+,-	LOC149134,AHCTF1	-121371,19310
chrX:30265249-30265472	chrX	+	30265291	30265445	True	NM_177415,NM_177404,NM_002363,NM_000475,NM_002367	chrX,chrX,chrX,chrX,chrX	+,+,+,-,+	MAGEB1,MAGEB1,MAGEB1,NR0B1,MAGEB4	-3494,-71,-3494,62100,-5285
chr19:58979768-58980856	chr19	+	58979776	58980854	True	NM_017908,NM_003433,NM_014347	chr19,chr19,chr19	+,-,+	ZNF446,ZNF132,ZNF324	6940,-28187,-1415
chr1:74703578-74705346	chr1	+	74703587	74705256	True	NM_015978,NM_001105659	chr1,chr1	+,-	TNNI3K,LRRIQ3	-2568,-39716
chrX:47482976-47483200	chrX	+	47483054	47483212	True	NM_001145252,NM_002621,NM_006950,NM_133499,NR_028119	chrX,chrX,chrX,chrX,chrX	-,-,-,-,+	CFP,CFP,SYN1,SYN1,LOC100133957	6207,6542,-3798,-3798,35019
chr16:27441596-27441857	chr16	+	27441597	27441862	True	NR_037158,NM_021798	chr16,chr16	-,+	LOC283888,IL21R	22909,-3069
chr1:47082286-47082493	chr1	+	47082286	47082492	True	NM_201403,NM_001145474,NM_145279	chr1,chr1,chr1	-,+,-	MOBKL2C,C1orf223,MOBKL2C	121,55007,-1481
chr19:11074482-11075077	chr19	+	11074656	11074984	True	NM_001128844,NM_024029,NM_003072,NM_001128849	chr19,chr19,chr19,chr19	+,-,+,+	SMARCA4,YIPF2,SMARCA4,SMARCA4	-3109,-35299,-3109,-2899
chr12:93577038-93577550	chr12	+	93577537	93577599	True	NM_019094,NM_003566	chr12,chr12	+,-	NUDT4,EEA1	194101,-254430
chr19:52844653-52845813	chr19	+	52845328	52845726	True	NM_001161427,NM_001161426,NM_001161425,NM_001102657,NM_173530	chr19,chr19,chr19,chr19,chr19	+,+,+,-,+	ZNF610,ZNF610,ZNF610,ZNF836,ZNF610	-5888,-5888,-5888,-170432,2955
chr8:37385165-37386675	chr8	+	37385172	37386668	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	166632,218946
chr11:65837730-65837950	chr11	+	65837743	65837863	True	NM_033036,NM_018026	chr11,chr11	-,+	GAL3ST3,PACS1	-21092,14
chr2:17997929-17998225	chr2	+	17997930	17998252	True	NM_001105569,NM_024624	chr2,chr2	+,-	MSGN1,SMC6	-195,-62834
chr3:56618924-56620272	chr3	+	56619228	56620216	True	NR_024460,NM_015224	chr3,chr3	+,-	CCDC66,C3orf63	-28102,77920
chr5:110841814-110843299	chr5	+	110842350	110843222	True	NM_001744,NM_139164	chr5,chr5	+,-	CAMK4,STARD4	-282468,4985
chr2:29132095-29133653	chr2	+	29132371	29133313	True	NM_017910,NR_003074	chr2,chr2	-,+	TRMT61B,SNORD92	-39196,3214
chr10:90201519-90201722	chr10	+	90201519	90201735	True	NM_018363,NM_001010939	chr10,chr10	-,+	RNLS,LIPJ	141397,144783
chr18:13727304-13727888	chr18	+	13727308	13727823	True	NM_003799,NM_152352,NM_001098801	chr18,chr18,chr18	+,-,-	RNMT,C18orf19,C18orf19	-655,-717,-717
chr3:158389936-158390268	chr3	+	158389972	158390310	True	NM_024996,NM_020169	chr3,chr3	+,-	GFM1,LXN	-27708,222
chr3:138763704-138764069	chr3	+	138763728	138764118	True	NM_001134657,NR_026783	chr3,chr3	-,+	PRR23C,BPESC1	6,58908
chr3:138763704-138764069	chr3	+	138739792	138739842	False	NM_001040061,NM_001013650	chr3,chr3	+,-	C3orf72,PRR23B	-73767,-24
chr4:3314494-3315105	chr4	+	3314498	3315132	True	NM_002926,NM_198229,NM_002337	chr4,chr4,chr4	+,+,-	RGS12,RGS12,LRPAP1	741,741,219142
chr22:19108492-19109112	chr22	+	19108538	19109084	True	NM_053006,NM_005137,NM_001173533,NM_001184781,NM_001173534,NR_033674	chr22,chr22,chr22,chr22,chr22,chr22	+,-,-,-,-,-	TSSK2,DGCR2,DGCR2,DGCR2,DGCR2,DGCR2	9236,933,933,933,933,933
chr2:74689592-74690979	chr2	+	74689670	74690770	True	NM_001146158,NM_053050,NM_031288,NM_006302,NM_012477,NR_037849	chr2,chr2,chr2,chr2,chr2,chr2	-,-,+,-,+,+	MOGS,MRPL53,INO80B,MOGS,WBP1,INO80B-WBP1	1824,9229,-7571,1824,-4194,-7571
chr4:187647161-187647590	chr4	+	187647200	187647612	True	NM_000128,NM_005245	chr4,chr4	+,-	F11,FAT1	-460133,-2213
chr2:162274731-162275186	chr2	+	162274789	162275142	True	NM_006593,NM_001935	chr2,chr2	+,-	TBR1,DPP4	-2227,655960
chrY:6320055-6321531	chrY	+	6320103	6321235	True	NR_001533,NR_001535,NR_001534,NR_003588,NR_003592	chrY,chrY,chrY,chrY,chrY	-,+,+,+,+	TTTY8,TTTY21,TTTY7,TTTY21B,TTTY7B	20486,-8679,-2645,-8679,-2645
chrY:6320055-6321531	chrY	-	9549144	9550276	False	NR_003591,NR_001535,NR_001534,NR_003588,NR_003592	chrY,chrY,chrY,chrY,chrY	+,-,-,-,-	TTTY8B,TTTY21,TTTY7,TTTY21B,TTTY7B	-20486,8679,2645,8679,2645
chr20:61924816-61925108	chr20	+	61924883	61925137	True	NM_152864,NR_036220,NM_020882	chr20,chr20,chr20	-,+,+	NKAIN4,MIR4326,COL20A1	-38991,-6774,-396
chr9:126118563-126119573	chr9	+	126119064	126119520	True	NM_173689,NR_030332	chr9,chr9	+,-	CRB2,MIR601	-667,45412
chr17:72920489-72920766	chr17	+	72920686	72920746	True	NM_173477,NM_178160	chr17,chr17	-,+	USH1G,OTOP2	-1335,-367
chr16:58715780-58716626	chr16	+	58716077	58716357	True	NM_018231,NM_024860	chr16,chr16	-,+	SLC38A7,SETD6	2369,-166745
chr16:12147299-12147915	chr16	+	12147432	12147785	True	NM_001080530,NM_001130007	chr16,chr16	+,-	SNX29,GSPT1	-1436,-136913
chr11:64110392-64110625	chr11	+	64110452	64110664	True	NM_032251,NM_016404	chr11,chr11	+,-	CCDC88B,TRMT112	-2813,-25419
chr4:184245786-184247349	chr4	+	184245985	184247376	True	NM_001111319,NM_001185149,NM_017632	chr4,chr4,chr4	-,-,+	CLDN22,CLDN24,CDKN2AIP	-4058,-2406,118412
chr13:53603065-53603312	chr13	+	53603226	53603308	True	NM_032949,NM_006418	chr13,chr13	-,+	PCDH8,OLFM4	-180451,-408
chr20:3869119-3869328	chr20	+	3869147	3869341	True	NM_024960,NM_153638,NM_153640,NR_031722	chr20,chr20,chr20,chr20	+,+,+,-	PANK2,PANK2,PANK2,MIR103-2AS	144,400,1121,28919
chr14:101123606-101123917	chr14	+	101123653	101123843	True	NR_024096,NM_020836	chr14,chr14	+,-	C14orf70,BEGAIN	-102,-87522
chr4:146041057-146042745	chr4	+	146042108	146042721	True	NM_002940,NM_014885	chr4,chr4	+,-	ABCE1,ANAPC10	-23012,-22740
chr1:47902475-47902844	chr1	+	47902486	47902830	True	NR_026878,NM_004474	chr1,chr1	-,+	MGC12982,FOXD2	-2173,-848
chr13:38448616-38450528	chr13	+	38448821	38450149	True	NM_016179,NM_003306,NM_001135956,NM_001135957,NM_001135955,NM_016617,NM_001135958	chr13,chr13,chr13,chr13,chr13,chr13,chr13	-,-,-,-,-,+,-	TRPC4,TRPC4,TRPC4,TRPC4,TRPC4,UFM1,TRPC4	-4882,-4882,-4882,-4882,-4882,473792,-4882
chr15:51402318-51403994	chr15	+	51402451	51404043	True	NR_027642,NM_207381	chr15,chr15	+,-	LOC100132724,TNFAIP8L3	-166176,-4978
chr6:94476964-94478253	chr6	+	94477028	94477881	True	NM_004440,NR_015362	chr6,chr6	-,+	EPHA7,TSG1	-347728,-60285
chr15:96880432-96880793	chr15	+	96880458	96880839	True	NM_021005,NM_001145156,NR_034095,NM_001145157,NR_031715	chr15,chr15,chr15,chr15,chr15	+,+,-,+,+	NR2F2,NR2F2,LOC400456,NR2F2,MIR1469	-6405,-4722,-1010129,-3947,-4026
chr2:9696168-9696448	chr2	+	9696196	9696370	True	NM_001039613,NM_003183	chr2,chr2	+,-	IAH1,ADAM17	-81577,-279
chr3:50239648-50240374	chr3	+	50239693	50240359	True	NM_006764,NM_006841	chr3,chr3	-,+	IFRD2,SLC38A3	89717,2332
chr2:42992175-42992671	chr2	+	42992322	42992504	True	NM_148962,NM_020744	chr2,chr2	-,+	OXER1,MTA3	-921,-196702
chr2:113670212-113671370	chr2	+	113670431	113671369	True	NM_173204,NM_173205,NM_173202,NM_173203,NM_000576,NM_014439	chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,-,+	IL1F7,IL1F7,IL1F7,IL1F7,IL1B,IL1F7	66,1400,66,66,-76075,66
chr3:44769692-44770494	chr3	+	44769872	44770369	True	NM_145044,NM_020696	chr3,chr3	+,-	ZNF501,KIAA1143	754,32861
chr6:99873346-99873866	chr6	+	99873349	99873799	True	NM_032870,NM_015491,NM_001195131	chr6,chr6,chr6	-,-,+	SFRS18,SFRS18,LOC100130890	-142,-142,95070
chr19:5785648-5785885	chr19	+	5785697	5785931	True	NM_020175,NM_001134316,NM_001161619,NM_004558	chr19,chr19,chr19,chr19	-,-,-,+	DUS3L,PRR22,DUS3L,NRTN	5368,-921,5368,37886
chr22:37609649-37610940	chr22	+	37610020	37610830	True	NM_013385,NM_001051	chr22,chr22	+,-	CYTH4,SSTR3	67664,-1667
chr3:15643523-15645086	chr3	+	15643583	15644357	True	NM_000060,NM_012260	chr3,chr3	+,-	BTD,HACL1	-384,-453
chr1:24828532-24828893	chr1	+	24828533	24828697	True	NM_001199012,NM_013441	chr1,chr1	-,+	C1orf201,RCAN3	-86946,689
chrX:55182475-55183684	chrX	+	55182751	55183649	True	NM_001166703,NM_001166702,NR_030722,NM_001166700,NM_001166699,NM_130467,NM_001166704,NM_001166701,NM_138362	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,+,-,-,-	FAM104B,FAM104B,FAM104B,FAM104B,FAM104B,PAGE5,FAM104B,FAM104B,FAM104B	3946,3978,4039,4039,4039,63141,4039,4039,4039
chr5:176773062-176773452	chr5	+	176773086	176773372	True	NM_006816,NM_006480	chr5,chr5	-,+	LMAN2,RGS14	5563,11471
chr17:15392878-15393355	chr17	+	15392882	15393205	True	NM_001204477,NM_001130842	chr17,chr17	-,+	CDRT4,ZNF286A	-21957,209685
chr8:74889576-74890443	chr8	+	74889757	74890317	True	NM_001204858,NM_001204859,NM_001204857,NM_017866,NM_001204861,NR_033334,NM_001204863,NM_001204862,NM_005648,NM_001204860,NM_001204864,NM_001040613	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,+,-,+,-,-,-,-,-,+	TCEB1,TCEB1,TCEB1,TMEM70,TCEB1,TMEM70,TCEB1,TCEB1,TCEB1,TCEB1,TCEB1,TMEM70	-5235,-5235,-5235,-1436,-5614,-1436,-5235,-5614,-5235,-5235,-5235,-1436
chr16:58288998-58289760	chr16	+	58289010	58289479	True	NM_014157,NM_001142302,NM_001080492	chr16,chr16,chr16	+,+,-	CCDC113,CCDC113,PRSS54	-5221,-5221,39529
chr17:3628494-3628865	chr17	+	3628507	3628911	True	NM_175080,NM_031965	chr17,chr17	-,+	P2RX5,GSG2	-28809,-1361
chr1:180166672-180167560	chr1	+	180166810	180167604	True	NR_037642,NR_026900	chr1,chr1	-,+	LOC100527964,FLJ23867	76262,-68
chr1:47399891-47400874	chr1	+	47399972	47400860	True	NM_000778,NM_178033	chr1,chr1	-,+	CYP4A11,CYP4X1	6346,88379
chr1:47399891-47400874	chr1	-	47610007	47610287	False	NM_005764,NM_001010969	chr1,chr1	-,+	PDZK1IP1,CYP4A22	45534,-6951
chr19:50179255-50179499	chr19	+	50179409	50179527	True	NM_001571,NM_198318,NM_001536,NR_033397	chr19,chr19,chr19,chr19	-,+,+,+	IRF3,PRMT1,PRMT1,PRMT1	-10277,968,968,968
chr1:15738530-15738975	chr1	+	15738598	15738924	True	NM_024329,NM_001229	chr1,chr1	+,-	EFHD2,CASP9	-2258,112066
chr5:168728902-168729312	chr5	+	168728930	168729328	True	NM_017785,NM_003062	chr5,chr5	+,-	CCDC99,SLIT3	281309,-797
chrX:46428921-46429863	chrX	+	46428924	46429592	True	NM_001190417,NM_019886	chrX,chrX	-,+	ZNF674,CHST7	-24032,3599
chr13:51685487-51685812	chr13	+	51685526	51685774	True	NR_003923,NM_145019	chr13,chr13	-,+	GUCY1B2,FAM124A	-45233,110732
chr9:136025194-136025530	chr9	+	136025196	136025345	True	NR_001275,NM_001042368	chr9,chr9	+,-	CELP,RALGDS	-67321,-608
chr1:94375390-94375707	chr1	+	94375392	94375725	True	NR_030621,NM_002061	chr1,chr1	+,-	MIR760,GCLM	-63055,-380
chr17:42766834-42767250	chr17	+	42766852	42767298	True	NM_001099225,NM_144609,NR_036623	chr17,chr17,chr17	-,-,+	CCDC43,CCDC43,DBF4B	9,9,18677
chr17:5323074-5323396	chr17	+	5323187	5323445	True	NR_027685,NM_001160243,NM_001160244,NR_027681,NM_001160246,NR_027680,NM_001033002,NM_002532,NR_027682,NR_027684,NR_027683,NM_001160266,NM_001160267,NR_027678,NR_027679	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,+,+,-,+,+,+,+,+,+,+	RPAIN,RPAIN,RPAIN,RPAIN,RPAIN,RPAIN,RPAIN,NUP88,RPAIN,RPAIN,RPAIN,RPAIN,RPAIN,RPAIN,RPAIN	-277,-277,-277,-277,-277,-277,-277,-128,-277,-277,-277,-277,-277,-277,-277
chr10:79493847-79495639	chr10	+	79493905	79495584	True	NR_024585,NM_002247	chr10,chr10	+,-	LOC100128292,KCNMA1	190985,-96328
chr5:179107289-179109107	chr5	+	179107312	179108620	True	NM_001024649,NM_001164444	chr5,chr5	+,-	CANX,CBY3	17309,183
chr11:125705214-125706357	chr11	+	125705311	125706303	True	NM_001144874,NM_212555	chr11,chr11	+,-	PATE4,PATE2	-2151,-56597
chr16:2931620-2931961	chr16	+	2931747	2931838	True	NM_001142499,NM_138439,NM_022119,NM_001142500	chr16,chr16,chr16,chr16	+,+,-,+	FLYWCH2,FLYWCH2,PRSS22,FLYWCH2	1357,1357,-23576,1357
chr5:172758685-172759097	chr5	+	172758788	172759064	True	NM_013980,NM_003714	chr5,chr5	+,-	BNIP1,STC2	-187394,-2282
chr19:12888216-12888488	chr19	+	12888351	12888427	True	NM_002229,NM_013312,NM_001100176	chr19,chr19,chr19	+,-,-	JUNB,HOOK2,HOOK2	13882,-1917,-1917
chr17:3212493-3213050	chr17	+	3212583	3213096	True	NM_002550,NR_024128	chr17,chr17	-,+	OR3A1,OR3A4	-16707,442
chr1:230203437-230203777	chr1	+	230203511	230203621	True	NM_004481,NM_024554	chr1,chr1	+,-	GALNT2,PGBD5	-606,309820
chr19:49555164-49555570	chr19	+	49555277	49555455	True	NM_033183,NM_033043,NM_033142	chr19,chr19,chr19	-,+,-	CGB8,CGB5,CGB7	-2909,-8232,3592
chr11:3016474-3016904	chr11	+	3016491	3016941	True	NM_005969,NM_002555	chr11,chr11	-,+	NAP1L4,SLC22A18	-2884,-93030
chr22:38204183-38204784	chr22	+	38204279	38204496	True	NM_138797,NM_014291,NM_005318,NM_001171690	chr22,chr22,chr22,chr22	-,+,+,+	ANKRD54,GCAT,H1F0,GCAT	35914,-418,-3216,-418
chr5:59188142-59189045	chr5	+	59188174	59188938	True	NR_024617,NM_001104631	chr5,chr5	+,-	PART1,PDE4D	594601,733
chr19:56879931-56880386	chr19	+	56879957	56880413	True	NR_003127,NM_144690,NR_024057,NR_024056,NR_024055,NR_033418	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+	ZNF542,ZNF582,ZNF542,ZNF542,ZNF542,ZNF542	-540,24526,-518,-518,-518,-518
chr17:4699543-4701045	chr17	+	4699608	4701074	True	NM_002798,NM_001014985,NM_002663,NM_001144939,NM_001144941,NM_001144940,NM_182566	chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,-,-,-,-	PSMB6,GLTPD2,PLD2,VMO1,VMO1,VMO1,VMO1	-202,-7405,9346,-9879,-9879,-9879,-9879
chr21:45710234-45710444	chr21	+	45710242	45710454	True	NR_024108,NM_000658,NM_000383,NM_175867,NM_002626	chr21,chr21,chr21,chr21,chr21	+,+,+,-,+	PFKL,AIRE,AIRE,DNMT3L,PFKL	9470,-19,-4530,-28143,9475
chr19:46661759-46662182	chr19	+	46661922	46662100	True	NM_001135113,NM_207393	chr19,chr19	+,-	IGFL2,IGFL3	-10480,-33991
chr6:155611442-155613223	chr6	+	155611780	155613194	True	NM_001001346,NM_016020	chr6,chr6	+,-	CLDN20,TFB1M	-26684,22473
chr2:242087881-242088374	chr2	+	242088087	242088283	True	NM_015148,NM_002712	chr2,chr2	-,+	PASK,PPP1R7	645,1618
chr10:63479400-63480773	chr10	+	63479720	63480599	True	NM_178505,NM_173554	chr10,chr10	-,+	TMEM26,C10orf107	-266512,-57053
chr14:105954477-105955203	chr14	+	105954488	105955154	True	NM_001311,NM_001519,NM_001198983,NM_001134876,NM_001134877,NM_001134875	chr14,chr14,chr14,chr14,chr14,chr14	+,-,+,+,+,+	CRIP1,BRF1,C14orf80,C14orf80,C14orf80,C14orf80	-1282,-187159,1037,2431,1365,2431
chrX:148767762-148769127	chrX	+	148768874	148769164	True	NM_001011544,NM_032508	chrX,chrX	+,-	MAGEA11,TMEM185A	738,-55387
chr22:21354617-21354955	chr22	+	21354781	21354973	True	NM_030573,NM_001008695,NR_027052,NR_027051	chr22,chr22,chr22,chr22	-,-,+,+	THAP7,THAP7,FLJ39582,FLJ39582	1481,1481,1237,1237
chr17:38936048-38936534	chr17	+	38936061	38936549	True	NM_181539,NM_181537,NM_001195387	chr17,chr17,chr17	-,-,+	KRT26,KRT27,TMEM99	-7650,2287,38794
chr18:68893893-68894250	chr18	+	68893894	68894070	True	NM_173630,NM_004232	chr18,chr18	-,+	RTTN,SOCS6	-1020932,-937808
chr20:49638798-49639095	chr20	+	49638811	49639033	True	NM_002237,NM_014484	chr20,chr20	-,+	KCNG1,MOCS3	692,-63499
chr14:102278662-102279962	chr14	+	102278981	102279819	True	NM_002719,NM_178587,NM_178586,NR_031649	chr14,chr14,chr14,chr14	+,+,+,-	PPP2R5C,PPP2R5C,PPP2R5C,MIR1247	-2897,-2897,-2897,-252222
chr21:45606550-45606789	chr21	+	45606565	45606669	True	NM_198155,NM_015259	chr21,chr21	+,-	C21orf33,ICOSLG	-53122,54215
chr3:125900091-125901182	chr3	+	125900096	125900952	True	NM_182628,NM_012190,NM_001012337	chr3,chr3,chr3	+,-,+	CCDC37,ALDH1L1,ROPN1B	212829,-611,-212119
chr2:10217671-10218179	chr2	+	10217820	10217916	True	NM_001177718,NM_001037160	chr2,chr2	+,-	KLF11,CYS1	-33501,2672
chr14:105767827-105768151	chr14	+	105768009	105768195	True	NM_001519,NM_001100913	chr14,chr14	-,+	BRF1,PACS2	-680,12885
chrY:20296332-20296639	chrY	+	20296357	20296631	True	NM_004677,NM_001002906,NR_028083	chrY,chrY,chrY	+,+,-	XKRY,XKRY2,FAM41AY1	703,703,270351
chrY:20296332-20296639	chrY	-	19883143	19883417	False	NM_004677,NM_004825,NM_001002906	chrY,chrY,chrY	-,+,-	XKRY,CDY2A,XKRY2	-703,254249,-703
chr6:31803985-31804548	chr6_qbl_hap6	+	3097721	3098100	False	NM_001040437,NR_002745,NM_005527,NR_002742,NM_005346,NM_001040438	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,SNORD52,HSPA1B,C6orf48	-1420,-1073,-21239,408,-8609,-1420
chr6:31803985-31804548	chr6_dbb_hap3	+	3089651	3090030	False	NM_001040437,NR_002745,NM_005527,NR_002742,NM_005346,NM_001040438	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,SNORD52,HSPA1B,C6orf48	-1422,-1075,-21229,408,-8603,-1422
chr6:31803985-31804548	chr6	+	31804065	31804444	True	NM_001040437,NR_002745,NM_005527,NR_002742,NM_005346,NM_001040438	chr6,chr6,chr6,chr6,chr6,chr6	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,SNORD52,HSPA1B,C6orf48	-1423,-1076,-21230,408,-8604,-1423
chr6:31803985-31804548	chr6_apd_hap1	+	3118820	3119199	False	NM_001040437,NR_002745,NM_005527,NR_002742,NM_005346,NM_001040438	chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,SNORD52,HSPA1B,C6orf48	-1424,-1077,-21224,408,-8595,-1424
chr6:31803985-31804548	chr6_cox_hap2	+	3313639	3314018	False	NM_001040437,NR_002745,NM_005527,NR_002742,NM_005346,NM_001040438	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,SNORD52,HSPA1B,C6orf48	-1421,-1074,-21224,408,-8596,-1421
chr4:17775845-17776710	chr4	+	17776016	17776590	True	NM_015688,NM_022346	chr4,chr4	-,+	FAM184B,NCAPG	6603,35934
chr1:115037335-115037658	chr1	+	115037334	115037543	True	NM_003176,NM_015906	chr1,chr1	+,-	SYCP1,TRIM33	359911,16294
chr2:112657446-112659223	chr2	+	112657478	112658892	True	NM_022662,NM_006343	chr2,chr2	-,+	ANAPC1,MERTK	-15737,-1339
chr9:131040272-131040568	chr9	+	131040524	131040584	True	NM_001040011,NM_004486	chr9,chr9	+,-	C9orf119,GOLGA2	-2150,-2256
chr5:54599404-54600230	chr5	+	54599486	54600120	True	NM_015360,NM_019030	chr5,chr5	+,-	SKIV2L2,DHX29	3455,3451
chr12:51352722-51352993	chr12	+	51352817	51352906	True	NM_001109619,NM_001174130	chr12,chr12	+,-	HIGD1C,SLC11A2	-5095,50206
chr1:113709339-113711209	chr1	+	113709419	113710951	True	NM_003051,NM_014813	chr1,chr1	-,+	SLC16A1,LRIG2	-210444,-93639
chr2:9560789-9561738	chr2	+	9560834	9561422	True	NM_022334,NM_004763,NM_016207	chr2,chr2,chr2	-,-,+	ITGB1BP1,ITGB1BP1,CPSF3	2278,2278,2445
chr1:22957585-22958422	chr1	+	22957906	22958466	True	NM_015991,NR_036214	chr1,chr1	+,-	C1QA,MIR4253	4651,231310
chr16:851308-851668	chr16	+	851524	851588	True	NM_001013638,NM_016541	chr16,chr16	+,-	PRR25,GNG13	3854,-791
chr11:69456155-69456509	chr11	+	69456170	69456423	True	NM_153451,NM_053056	chr11,chr11	-,+	ORAOV1,CCND1	33795,-348
chrY:26333093-26333581	chrY	+	26333102	26333628	True	NR_001526,NR_001554	chrY,chrY	+,-	TTTY17A,CSPG4P1Y	297850,40
chrY:26333093-26333581	chrY	-	27628804	27629330	False	NR_002179,NR_001554	chrY,chrY	-,+	TTTY17C,CSPG4P1Y	-297884,-40
chr1:93259646-93260138	chr1	+	93259646	93259981	True	NM_005665,NM_000969	chr1,chr1	-,+	EVI5,RPL5	-1685,37612
chr5:36290612-36290924	chr5	+	36290691	36290833	True	NM_032637,NM_001161429	chr5,chr5	+,-	SKP2,RANBP3L	-138561,11231
chr1:24517263-24517732	chr1	+	24517525	24517709	True	NM_170743,NM_173064,NM_173065,NR_027087	chr1,chr1,chr1,chr1	-,-,-,+	IL28RA,IL28RA,IL28RA,LOC284632	-3760,-3760,-3760,9020
chr9:71151405-71151924	chr9	+	71151435	71151903	True	NM_153237,NM_003558	chr9,chr9	-,+	C9orf71,PIP5K1B	3930,168712
chr10:51626729-51627741	chr10	+	51626824	51627550	True	NM_001145262,NM_006327	chr10,chr10	+,-	NCOA4,TIMM23	-50605,-3488
chr10:51626729-51627741	chr10	-	51367218	51367931	False	NR_029388,NM_003631,NM_002443	chr10,chr10,chr10	-,-,+	LOC728407,PARG,MSMB	3450,3465,181621
chr1:1335199-1335429	chr1	+	1335199	1335477	True	NM_001039577,NM_017971,NR_015434,NM_030937	chr1,chr1,chr1,chr1	-,-,+,-	CCNL2,MRPL20,LOC148413,CCNL2	-481,7266,-340,-481
chr19:8067546-8068296	chr19	+	8067611	8067896	True	NM_001419,NM_001201359	chr19,chr19	-,+	ELAVL1,CCL25	2683,49749
chr2:171917659-171919575	chr2	+	171918135	171919461	True	NM_015530,NM_001136555	chr2,chr2	+,-	GORASP2,TLK1	-133152,4077
chr7:94287465-94287812	chr7	+	94287681	94287861	True	NM_003919,NM_001099400,NM_001184962,NM_001184961,NM_001172438,NM_001099401,NM_015068,NM_001172437,NM_001040152	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,+,+,+,-,+,+,+	SGCE,SGCE,PEG10,PEG10,PEG10,SGCE,PEG10,PEG10,PEG10	-2160,-2160,-2095,-2095,-2050,-2160,-2095,-2050,-2095
chr1:205648340-205648954	chr1	+	205648347	205648967	True	NM_033102,NM_181644	chr1,chr1	-,+	SLC45A3,MFSD4	713,-110286
chr4:10455497-10456650	chr4	+	10455714	10456431	True	NM_000798,NM_053042	chr4,chr4	+,-	DRD5,ZNF518B	-672507,2652
chr1:32538745-32539537	chr1	+	32538925	32539495	True	NM_018056,NM_080391	chr1,chr1	+,-	TMEM39B,PTP4A2	-473,-134937
chr4:3441357-3441561	chr4	+	3441361	3441421	True	NM_002337,NM_001528	chr4,chr4	-,+	LRPAP1,HGFAC	92853,2304
chr1:153920756-153921454	chr1	+	153920860	153921388	True	NM_130898,NM_181715,NM_014856	chr1,chr1,chr1	+,-,-	CREB3L4,CRTC2,DENND4B	19008,9794,-1706
chr19:3764948-3765306	chr19	+	3765074	3765352	True	NM_004886,NM_172251,NM_032753	chr19,chr19,chr19	-,+,-	APBA3,MRPL54,RAX2	-3401,-2460,6917
chr1:153642466-153642750	chr1	+	153642506	153642792	True	NM_000906,NM_004515	chr1,chr1	+,-	NPR1,ILF2	8371,737
chr6:138428382-138428625	chr6	+	138428442	138428600	True	NM_022121,NM_020340	chr6,chr6	-,+	PERP,KIAA1244	110,54452
chr16:79825437-79827007	chr16	+	79825688	79826894	True	NM_005360,NM_130897	chr16,chr16	-,+	MAF,DYNLRB2	-191066,747959
chr9:110045508-110045729	chr9	+	110045549	110045691	True	NR_031752,NM_002874	chr9,chr9	-,+	MIR548Q,RAD23B	-196833,-56
chr19:45203842-45204160	chr19	+	45203842	45204122	True	NM_001039213,NR_027754	chr19,chr19	+,-	CEACAM16,CEACAM22P	-1477,-143692
chr1:204379945-204380312	chr1	+	204380026	204380306	True	NM_001204171,NM_032833	chr1,chr1	+,-	MDM4,PPP1R15B	105200,688
chr3:32858399-32858748	chr3	+	32858578	32858660	True	NM_016141,NM_001039111	chr3,chr3	-,+	DYNC1LI1,TRIM71	-246212,849
chr3:148804239-148804452	chr3	+	148804243	148804397	True	NM_032383,NM_139048,NM_003071	chr3,chr3,chr3	+,-,-	HPS3,HLTF,HLTF	42973,-6,-6
chr3:196753257-196753554	chr3	+	196753375	196753577	True	NR_024388,NM_005929,NM_033316	chr3,chr3,chr3	+,-,-	LOC152217,MFI2,MFI2	-83932,3160,3159
chr11:126029622-126031057	chr11	+	126029979	126030955	True	NM_001144827,NM_024556	chr11,chr11	-,+	RPUSD4,FAM118B	50682,50663
chr3:133614485-133614708	chr3	+	133614539	133614631	True	NM_021203,NM_016577	chr3,chr3	+,-	SRPRB,RAB6B	-111713,110
chr2:233415030-233415309	chr2	+	233415034	233415336	True	NM_004846,NM_145702	chr2,chr2	+,-	EIF4E2,TIGD1	20,-36
chr2:128644339-128646075	chr2	+	128644880	128645888	True	NM_032740,NM_031445,NM_001199140	chr2,chr2,chr2	+,-,-	SFT2D3,AMMECR1L,AMMECR1L	-186348,-2446,-1366
chr11:65545979-65546220	chr11	+	65545987	65546267	True	NM_138368,NM_004561	chr11,chr11	-,+	DKFZp761E198,OVOL1	1605,8261
chr8:67622562-67622996	chr8	+	67622741	67623035	True	NM_001033578,NM_025054	chr8,chr8	+,-	SGK3,VCPIP1	1617,-43289
chr4:56210584-56212355	chr4	+	56210764	56212232	True	NR_037969,NM_024592	chr4,chr4	-,+	LOC100506462,SRD5A3	39565,155
chr2:130738534-130739469	chr2	+	130738831	130739492	True	NR_036537,NM_032144	chr2,chr2	-,+	LOC100131320,RAB6C	-786,-1654
chr2:109063296-109065121	chr2	+	109063430	109064942	True	NR_028063,NM_022336,NM_181453	chr2,chr2,chr2	+,-,+	GCC2,EDAR,GCC2	634,540937,634
chr1:186355929-186356798	chr1	+	186355929	186356748	True	NM_017847,NM_003292	chr1,chr1	+,-	C1orf27,TPR	-11102,-11472
chr2:158485578-158486875	chr2	+	158485642	158486897	True	NM_001111033,NM_001111032,NM_001135098,NM_145259	chr2,chr2,chr2,chr2	-,-,+,-	ACVR1C,ACVR1C,UPP2,ACVR1C	-243,-243,364793,-243
chr18:29040155-29040469	chr18	+	29040161	29040421	True	NM_004775,NM_001944	chr18,chr18	-,+	B4GALT6,DSG3	224317,-12480
chr19:18903354-18904040	chr19	+	18903384	18903862	True	NM_000095,NM_002911	chr19,chr19	-,+	COMP,UPF1	-1270,38881
chr5:15511079-15512211	chr5	+	15511127	15512161	True	NM_054027,NM_012304	chr5,chr5	-,+	ANKH,FBXL7	-639240,-10874
chr8:54776378-54777085	chr8	+	54776638	54777083	True	NM_170587,NM_213619	chr8,chr8	+,-	RGS20,ATP6V1H	-12328,-20788
chr8:101099802-101101024	chr8	+	101099930	101100967	True	NM_015668,NM_005034	chr8,chr8	-,+	RGS22,POLR2K	17428,61871
chr1:6322885-6323180	chr1	+	6322902	6323154	True	NM_207370,NM_001024598	chr1,chr1	-,+	GPR153,HES3	-1867,-18701
chr16:24290655-24291380	chr16	+	24290982	24291422	True	NM_006539,NM_033266	chr16,chr16	+,-	CACNG3,ERN2	-24166,-566161
chr7:107421951-107423186	chr7	+	107422239	107423152	True	NM_000111,NR_024199	chr7,chr7	-,+	SLC26A3,CBLL1	20585,-38020
chr17:3460497-3461038	chr17	+	3460727	3461025	True	NM_145068,NM_001031681	chr17,chr17	-,+	TRPV3,CTNS	314,78736
chr4:620164-620692	chr4	+	620302	620620	True	NM_000283,NM_007100,NM_001145291	chr4,chr4,chr4	+,-,+	PDE6B,ATP5I,PDE6B	-990,47557,-990
chr11:123809145-123809473	chr11	+	123809152	123809467	True	NM_001001965,NM_001005187	chr11,chr11	+,-	OR4D5,OR6T1	856,5128
chr22:36010360-36010853	chr22	+	36010544	36010898	True	NM_005368,NM_030641,NM_203378,NM_203377	chr22,chr22,chr22,chr22	-,+,-,-	MB,APOL6,MB,MB	2536,33525,2707,8553
chr16:2076217-2076470	chr16	+	2076229	2076465	True	NM_001130012,NM_178167,NM_001099456,NM_004785	chr16,chr16,chr16,chr16	+,-,+,+	SLC9A3R2,ZNF598,NPW,SLC9A3R2	422,-16466,-6759,422
chr12:31480182-31480995	chr12	+	31480205	31480841	True	NM_021238,NR_026806,NM_001135812,NM_001135811	chr12,chr12,chr12,chr12	-,+,-,-	FAM60A,FLJ13224,FAM60A,FAM60A	-1084,-3010,-1046,-1084
chr7:111847305-111848151	chr7	+	111847309	111848071	True	NM_021994,NM_014705	chr7,chr7	+,-	ZNF277,DOCK4	-717,-847
chr21:18884660-18885156	chr21	+	18884670	18885046	True	NM_001130914,NM_001338	chr21,chr21	-,+	BTG3,CXADR	100272,283
chr15:30395329-30395696	chr15	+	30395596	30395658	True	NR_026859,NM_175610	chr15,chr15	+,-	FAM7A3,TJP1	276,-280890
chr19:38826091-38826451	chr19	+	38826195	38826451	True	NM_001145463,NM_021185	chr19,chr19	-,+	YIF1B,CATSPERG	-19589,-9
chr1:11939557-11940022	chr1	+	11939562	11939920	True	NM_002521,NR_037806	chr1,chr1	-,+	NPPB,NPPA-AS1	-20570,-39237
chr6:54711219-54711474	chr6	+	54711298	54711518	True	NM_001010872,NM_001042406	chr6,chr6	+,-	FAM83B,HMGCLL1	50,732544
chr17:4855147-4855512	chr17	+	4855182	4855470	True	NM_005022,NM_001976,NM_001193503,NM_053013	chr17,chr17,chr17,chr17	-,+,+,+	PFN1,ENO3,ENO3,ENO3	-3357,-849,-849,-849
chr11:67219496-67219734	chr11	+	67219499	67219751	True	NM_020441,NM_145200,NM_206997,NM_001018070	chr11,chr11,chr11,chr11	-,+,-,-	CORO1B,CABP4,GPR152,CORO1B	-8516,3066,499,-8236
chr6:52701603-52702120	chr6	+	52701816	52702038	True	NM_014051,NM_153699	chr6,chr6	+,-	TMEM14A,GSTA5	-165983,8905
chr10:69994511-69996199	chr10	+	69994669	69995921	True	NM_145178,NM_012207	chr10,chr10	-,+	ATOH7,HNRNPH3	-2814,95846
chr2:3706574-3707842	chr2	+	3706691	3707459	True	NM_002936,NM_018436	chr2,chr2	-,+	RNASEH1,ALLC	-100751,-957
chr19:795892-796117	chr19	+	795891	796151	True	NM_024888,NM_175847,NM_031991,NM_031990,NM_002819	chr19,chr19,chr19,chr19,chr19	-,+,+,+,+	LPPR3,PTBP1,PTBP1,PTBP1,PTBP1	25851,1240,1240,1240,1240
chr12:49962620-49963090	chr12	+	49962663	49962885	True	NM_006337,NM_012284,NM_001012300	chr12,chr12,chr12	-,+,-	MCRS1,KCNH3,MCRS1	-752,-29779,-2441
chr12:5442493-5442701	chr12	+	5442539	5442735	True	NM_020373,NM_001102654	chr12,chr12	-,+	ANO2,NTF3	612713,98544
chr8:107780984-107782258	chr8	+	107781294	107782104	True	NM_001198535,NM_139166	chr8,chr8	+,-	OXR1,ABRA	-43017,418
chr12:25104376-25104741	chr12	+	25104605	25104765	True	NM_005504,NM_001204126,NM_001178091,NM_001178092	chr12,chr12,chr12,chr12	-,+,-,-	BCAT1,LRMP,BCAT1,BCAT1	-2212,100415,-2212,-2212
chr14:96860844-96861822	chr14	+	96860847	96861838	True	NM_152327,NM_018036	chr14,chr14	+,-	AK7,ATG2B	-2457,-31169
chr1:104667099-104668382	chr1	+	104667522	104668420	True	NM_001008221,NR_033990	chr1,chr1	-,+	AMY1A,LOC100129138	-428449,-51941
chr2:36825416-36826985	chr2	+	36825427	36826041	True	NM_001177972,NM_005102,NM_001042548	chr2,chr2,chr2	+,-,-	VIT,FEZ2,FEZ2	97791,-95,-95
chr16:3765361-3766147	chr16	+	3765515	3766195	True	NM_005223,NM_016292	chr16,chr16	+,-	DNASE1,TRAP1	-62626,1454
chrX:24665660-24665880	chrX	+	24665706	24665873	True	NM_001163265,NM_016937,NM_004845	chrX,chrX,chrX	-,+,-	PCYT1B,POLA1,PCYT1B	-251,46190,-251
chr20:48771557-48772244	chr20	+	48771939	48772291	True	NM_001162505,NM_199129,NR_027889,NM_005194,NM_199203	chr20,chr20,chr20,chr20,chr20	-,-,-,+,-	TMEM189,TMEM189,TMEM189,CEBPB,TMEM189-UBE2V1	-1604,-1604,-1604,35084,-1604
chr20:37075784-37076370	chr20	+	37075877	37076387	True	NR_003239,NR_002972,NR_002986,NR_027241	chr20,chr20,chr20,chr20	+,+,+,-	SNHG11,SNORA39,SNORA60,LOC388796	-631,338,1624,-11859
chrX:23931599-23931828	chrX	+	23931649	23931733	True	NM_024122,NM_001169574,NR_026545,NM_152761	chrX,chrX,chrX,chrX	-,+,-,+	APOO,CXorf58,APOO,CXorf58	-5592,-5582,-5592,-5582
chr7:151652439-151652923	chr7	+	151652443	151652818	True	NM_145292,NM_016203,NR_033169	chr7,chr7,chr7	+,-,+	GALNTL5,PRKAG2,GALNTL5	645,-78127,645
chr11:102323759-102325419	chr11	+	102323989	102324998	True	NM_001166,NM_052932	chr11,chr11	+,-	BIRC2,TMEM123	-106079,-214
chr3:183903495-183903711	chr3	+	183903529	183903633	True	NM_005787,NM_018358	chr3,chr3	-,+	ALG3,ABCF3	63176,229
chr19:19494689-19495000	chr19	+	19494708	19494850	True	NM_172231,NM_017660	chr19,chr19	-,+	SUGP1,GATAD2A	-63401,1791
chr2:150185608-150186139	chr2	+	150185625	150186171	True	NM_015702,NM_001195685,NM_194317	chr2,chr2,chr2	-,+,+	MMADHC,LYPD6,LYPD6	258209,327,857
chr12:53184014-53184215	chr12	+	53184056	53184254	True	NM_199187,NM_057088	chr12,chr12	+,-	KRT18,KRT3	158400,5688
chr22:40764782-40766059	chr22	+	40764948	40766068	True	NM_020831,NM_015705	chr22,chr22	-,+	MKL1,SGSM3	266672,526
chr13:72441610-72442672	chr13	+	72441661	72442694	True	NM_004392,NM_080760,NM_024808,NM_080759	chr13,chr13,chr13,chr13	-,-,+,-	DACH1,DACH1,C13orf34,DACH1	-331,-331,859347,-331
chr14:21526057-21527131	chr14	+	21526201	21527037	True	NM_001012264,NM_138331	chr14,chr14	-,+	RNASE13,RNASE8	-23257,-200
chr6:101328814-101329025	chr6	+	101328927	101329056	True	NM_022091,NM_001166247,NM_006828	chr6,chr6,chr6	-,+,-	ASCC3,GRIK2,ASCC3	218,517804,218
chr1:113614260-113614495	chr1	+	113614343	113614543	True	NM_003051,NM_014813	chr1,chr1	-,+	SLC16A1,LRIG2	-115368,1287
chrX:100645472-100646104	chrX	+	100645514	100646006	True	NM_000061,NM_021029,NM_001199974,NM_001199972,NM_001199973	chrX,chrX,chrX,chrX,chrX	-,+,+,+,+	BTK,RPL36A,RPL36A-HNRNPH2,RPL36A,RPL36A-HNRNPH2	-4302,-83,-83,-83,-83
chrX:119695741-119697179	chrX	+	119695867	119697025	True	NM_014060,NM_001079872	chrX,chrX	+,-	MCTS1,CUL4B	40718,-1050
chr13:24466434-24467135	chr13	+	24466861	24467055	True	NM_001135816,NM_005932,NM_001014442,NM_001007537	chr13,chr13,chr13,chr13	+,-,+,-	PCOTH,MIPEP,PCOTH,C1QTNF9B	-3327,-3274,-3891,4120
chr13:24466434-24467135	chr13	-	24894275	24894325	False	NM_178540,NM_006437	chr13,chr13	+,-	C1QTNF9,PARP4	-10610,192673
chr6:72129113-72129581	chr6	+	72129169	72129623	True	NM_024576,NR_026807	chr6,chr6	+,-	OGFRL1,C6orf155	-130750,875
chr15:65668657-65668962	chr15	+	65668693	65668781	True	NM_004884,NM_016395	chr15,chr15	-,+	IGDCC3,PTPLAD1	1647,154045
chr18:74729272-74729527	chr18	+	74729327	74729495	True	NM_007345,NM_002385,NM_001025081,NM_001025090,NM_001025092	chr18,chr18,chr18,chr18,chr18	+,-,-,-,-	ZNF236,MBP,MBP,MBP,MBP	-193262,-272,-272,-272,-272
chr2:37459307-37460145	chr2	+	37459361	37460165	True	NM_144736,NM_005760,NM_001083946	chr2,chr2,chr2	+,-,+	C2orf56,CEBPZ,C2orf56	-638,-621,-638
chr19:1523509-1523747	chr19	+	1523565	1523737	True	NR_026557,NM_213604	chr19,chr19	+,-	PLK5P,ADAMTSL5	340,-10377
chr16:18025543-18026386	chr16	+	18025620	18026409	True	NR_003569,NM_022166	chr16,chr16	+,-	ABCC6P1,XYLT1	556160,-460882
chr9:4650995-4652208	chr9	+	4651434	4651970	True	NM_203453,NM_001039395	chr9,chr9	+,-	PPAPDC2,C9orf68	10327,14766
chr2:133174633-133175172	chr2	+	133174694	133175032	True	NM_001508,NR_027020	chr2,chr2	+,-	GPR39,ANKRD30BL	-598,-159152
chr18:813835-815365	chr18	+	814054	815158	True	NM_001099733,NM_005433	chr18,chr18	+,-	ADCYAP1,YES1	89785,-1727
chr11:66728887-66730083	chr11	+	66728988	66730072	True	NM_000920,NM_001136485,NM_001040716	chr11,chr11,chr11	-,+,-	PC,C11orf86,PC	-3141,12681,-3141
chr9:140171514-140172043	chr9	+	140171577	140172052	True	NM_017723,NM_001004354	chr9,chr9	+,-	C9orf167,NRARP	227,24701
chr3:66023813-66024222	chr3	+	66023921	66024259	True	NM_173471,NM_015520,NM_001033057,NM_004742	chr3,chr3,chr3,chr3	+,-,-,-	SLC25A26,MAGI1,MAGI1,MAGI1	95025,300,300,300
chr6:27344523-27346325	chr6	+	27344681	27345969	True	NM_001076781,NR_024553,NR_002722	chr6,chr6,chr6	+,-,-	ZNF391,ZNF204P,ZNF204P	10554,-1528,-5377
chr9:136389159-136390499	chr9	+	136389215	136390197	True	NM_014694,NM_001080483,NM_001145320	chr9,chr9,chr9	+,-,+	ADAMTSL2,TMEM8C,ADAMTSL2	9777,-63,7088
chr2:68546694-68546956	chr2	+	68546737	68546875	True	NM_015463,NM_002664,NM_001111101	chr2,chr2,chr2	-,+,-	CNRIP1,PLEK,CNRIP1	358,45446,358
chr10:15089549-15090194	chr10	+	15089754	15090215	True	NM_001039844,NM_018324,NM_001039702	chr10,chr10,chr10	-,+,+	ACBD7,OLAH,OLAH	40616,-3914,-3914
chr11:2009897-2010343	chr11	+	2009925	2010333	True	NR_024471,NR_002196,NR_030533,NM_021134	chr11,chr11,chr11,chr11	-,-,-,+	LOC100133545,H19,MIR675,MRPL23	867,8782,7778,-41474
chr2:174637424-174639103	chr2	+	174637468	174638760	True	NM_145810,NM_001017371	chr2,chr2	+,-	CDCA7,SP3	-417965,190237
chrX:38182722-38183646	chrX	+	38182755	38183342	True	NM_001034853,NM_000328,NM_000531	chrX,chrX,chrX	-,-,+	RPGR,RPGR,OTC	3501,3501,28393
chr3:44497831-44499214	chr3	+	44498009	44499217	True	NM_018651,NM_181489	chr3,chr3	+,-	ZNF167,ZNF445	97495,19995
chr11:6667489-6667904	chr11	+	6667563	6667887	True	NM_001014795,NM_003737	chr11,chr11	+,-	ILK,DCHS1	-42407,9237
chr1:78224024-78224887	chr1	+	78224310	78224879	True	NM_015017,NM_201626,NM_198549,NM_201624	chr1,chr1,chr1,chr1	-,-,+,-	USP33,USP33,FAM73A,USP33	709,709,20429,709
chr12:12232993-12233408	chr12	+	12233149	12233280	True	NM_138722,NM_138723,NM_030766,NM_002336	chr12,chr12,chr12,chr12	+,+,+,-	BCL2L14,BCL2L14,BCL2L14,LRP6	-8801,-9325,-8801,186582
chrX:23928779-23930361	chrX	+	23928822	23929987	True	NM_024122,NM_001169574,NR_026545,NM_152761	chrX,chrX,chrX,chrX	-,+,-,+	APOO,CXorf58,APOO,CXorf58	-2765,-2756,-2765,-2756
chr20:29956328-29957486	chr20	+	29956379	29957192	True	NM_153289,NM_054112	chr20,chr20	-,+	DEFB119,DEFB118	21275,-10
chr3:12524729-12525864	chr3	+	12524887	12525787	True	NM_001195279,NM_025265,NM_001145393,NM_001145392,NM_001145395,NM_001145394	chr3,chr3,chr3,chr3,chr3,chr3	-,+,+,+,+,+	LOC100129480,TSEN2,TSEN2,TSEN2,TSEN2,TSEN2	61226,222,143,222,222,143
chr12:27153685-27155333	chr12	+	27153870	27154893	True	NM_004264,NM_016551	chr12,chr12	+,-	MED21,TM7SF3	20589,12507
chr11:118979649-118980371	chr11	+	118979707	118980373	True	NM_014807,NM_001382	chr11,chr11	+,-	C2CD2L,DPAGT1	-1665,-6922
chr3:179319986-179321790	chr3	+	179320213	179321845	True	NM_001199958,NM_002492,NM_177988,NM_020409,NM_001199957	chr3,chr3,chr3,chr3,chr3	+,+,-,-,+	NDUFB5,NDUFB5,MRPL47,MRPL47,NDUFB5	729,729,648,648,729
chr3:156877151-156877431	chr3	+	156877160	156877228	True	NR_034008,NM_020307	chr3,chr3	+,-	LOC100498859,CCNL1	-69541,1304
chr9:97022708-97022953	chr9	+	97022819	97022999	True	NM_194320,NM_017561	chr9,chr9	+,-	ZNF169,FAM22F	-1292,67977
chr4:42659789-42661397	chr4	+	42659827	42661377	True	NM_001080476,NM_001105529,NM_006095	chr4,chr4,chr4	+,-,-	GRXCR1,ATP8A1,ATP8A1	233905,-705,-705
chr2:198320403-198321411	chr2	+	198320597	198320889	True	NM_025147,NM_001005526	chr2,chr2	+,-	COQ10B,SF3B1	-2417,-20826
chr12:10754034-10755804	chr12	+	10754227	10755656	True	NM_007334,NR_028045	chr12,chr12	+,-	KLRD1,KLRAP1	-293874,-1793
chr12:56121318-56122026	chr12	+	56121317	56121905	True	NM_002905,NM_001780,NM_001199771,NM_001040034	chr12,chr12,chr12,chr12	+,-,+,-	RDH5,CD63,RDH5,CD63	-7217,1055,-7217,1055
chr17:79883804-79884560	chr17	+	79883921	79884547	True	NM_002359,NM_016538,NM_032711,NR_015454	chr17,chr17,chr17,chr17	-,-,-,+	MAFG,SIRT7,MAFG,LOC92659	1091,-7863,-2513,1157
chr9:127213038-127213317	chr9	+	127213086	127213338	True	NM_002799,NM_001161808	chr9,chr9	-,+	PSMB7,GPR144	-35365,84
chr17:71255613-71256625	chr17	+	71255653	71256610	True	NM_001129885,NM_017941	chr17,chr17	-,+	CPSF4L,C17orf80	1459,-26929
chr1:84962712-84962986	chr1	+	84962838	84963036	True	NR_036561,NM_005274	chr1,chr1	+,-	SPATA1,GNG5	8937,9278
chr1:11332328-11332841	chr1	+	11332562	11332882	True	NM_004958,NM_013319	chr1,chr1	-,+	MTOR,UBIAD1	-9954,372
chr6:4344208-4344729	chr6	+	4344255	4344763	True	NR_028588,NM_001085401	chr6,chr6	-,+	ECI2,C6orf201	-208424,-264866
chr17:60458886-60459139	chr17	+	60458967	60459185	True	NM_173503,NR_027486	chr17,chr17	+,-	EFCAB3,TBC1D3P2	-1104,-105951
chr3:44402304-44403007	chr3	+	44402451	44403019	True	NM_173826,NM_181489	chr3,chr3	+,-	C3orf23,ZNF445	-22565,116193
chr16:12069744-12070179	chr16	+	12069743	12070223	True	NM_001130007,NM_032167	chr16,chr16	-,+	GSPT1,RUNDC2A	-59224,378
chr22:39969974-39970304	chr22	+	39970015	39970273	True	NM_001003406,NM_194326,NM_021096	chr22,chr22,chr22	+,-,+	CACNA1I,RPS19BP1,CACNA1I	-3308,-41155,-3308
chrX:138905164-138905402	chrX	+	138905387	138905456	True	NM_173694,NM_000133,NM_001010986	chrX,chrX,chrX	-,+,-	ATP11C,F9,ATP11C	9050,-292551,9050
chr17:4981240-4981502	chr17	+	4981239	4981551	True	NM_017986,NM_153018	chr17,chr17	-,+	GPR172B,ZFP3	-42512,202
chr10:21805387-21805650	chr10	+	21805397	21805607	True	NM_207371,NM_001195627	chr10,chr10	-,+	C10orf140,MLLT10	9054,17493
chr3:10806392-10806668	chr3	+	10806439	10806667	True	NR_027102,NM_014229	chr3,chr3	-,+	LOC285370,SLC6A11	-562,51249
chr12:113623715-113624426	chr12	+	113623837	113624443	True	NM_024072,NM_001111322,NM_032848	chr12,chr12,chr12	-,-,+	DDX54,DDX54,C12orf52	-553,-553,-333
chr1:36553606-36553878	chr1	+	36553655	36553891	True	NM_017825,NM_005202,NM_014466	chr1,chr1,chr1	+,-,+	ADPRHL2,COL8A2,TEKT2	561,12009,-4030
chr19:35625617-35626099	chr19	+	35625723	35625947	True	NM_005031,NM_021902,NM_139284,NM_022006	chr19,chr19,chr19,chr19	+,+,-,+	FXYD1,FXYD1,LGI4,FXYD7	4444,3784,281,8206
chr11:3544624-3545347	chr12	+	8484986	8485043	True	NM_001007033,NR_024420	chr12,chr12	+,-	CLEC6A,LOC389634	123547,58362
chr3:94224765-94225973	chr3	+	94225179	94225989	True	NR_015400,NM_001195643	chr3,chr3	+,-	LOC255025,DHFRL1	431117,-443112
chr11:125036765-125037260	chr11	+	125036764	125037248	True	NM_001080546,NM_022062	chr11,chr11	-,+	TMEM218,PKNOX2	-63559,-2256
chr19:36001906-36002252	chr19	+	36001993	36002277	True	NM_001035516,NM_001190348,NM_001126059,NM_001126058,NM_001126057,NM_001190347,NM_001190349,NM_001126056,NR_033746,NM_014364,NM_033317	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,-,-,+,-	DMKN,DMKN,DMKN,DMKN,DMKN,DMKN,DMKN,DMKN,DMKN,GAPDHS,DMKN	-9180,2333,-602,2333,2333,2333,2333,2333,-581,22036,2333
chr20:6101927-6102938	chr20	+	6102070	6102976	True	NM_001127458,NM_017671	chr20,chr20	+,-	CRLS1,FERMT1	-114223,1265
chr17:7386336-7386662	chr17	+	7386352	7386548	True	NM_000937,NM_020899,NM_001128833,NM_001102614	chr17,chr17,chr17,chr17	+,-,-,+	POLR2A,ZBTB4,ZBTB4,AMAC1L3	1149,1070,-3408,-1683
chr17:7386336-7386662	chr17	-	33520173	33520259	False	NM_173167,NM_152462	chr17,chr17	+,-	UNC45B,AMAC1	-45388,1204
chr14:54956432-54956901	chr14	+	54956611	54956935	True	NM_004124,NM_006568	chr14,chr14	-,+	GMFB,CGRRF1	-867,19651
chr15:83676990-83677865	chr15	+	83677319	83677858	True	NR_027649,NM_031452,NR_027650,NM_001160114,NM_001160115,NM_001160116,NM_001160113,NM_144597	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,+,-,-,-,-,-,-	C15orf40,FAM103A1,C15orf40,C15orf40,C15orf40,C15orf40,C15orf40,C15orf40	2586,-22375,2586,2586,2586,2586,2586,2586
chr5:140249303-140250371	chr5	+	140249364	140250092	True	NM_018903,NM_018902,NM_031861,NM_002109,NM_031864	chr5,chr5,chr5,chr5,chr5	+,+,+,-,+	PCDHA12,PCDHA11,PCDHA11,HARS,PCDHA12	4838,-1591,-1591,-178393,4838
chr11:43701427-43701716	chr11	+	43701446	43701530	True	NR_033868,NM_016142	chr11,chr11	-,+	LOC399881,HSD17B12	-410527,612
chr7:100288489-100288694	chr7	+	100288600	100288676	True	NM_005837,NM_022574	chr7,chr7	+,-	POP7,GIGYF1	14999,-1730
chr11:34939050-34939790	chr11	+	34939120	34939705	True	NM_015957,NM_003477,NM_001166158,NM_001135024	chr11,chr11,chr11,chr11	-,+,+,+	APIP,PDHX,PDHX,PDHX	-1181,-1504,-1504,-1504
chr15:75164894-75165244	chr15	+	75164905	75165271	True	NM_005697,NM_002435	chr15,chr15	-,+	SCAMP2,MPI	449,17138
chr11:63706775-63707092	chr11	+	63706906	63707098	True	NM_024771,NM_173587	chr11,chr11	+,-	NAA40,RCOR2	-515,-22590
chrX:152938577-152938813	chrX	+	152938677	152938857	True	NM_001142805,NM_001039582,NM_001135740	chrX,chrX,chrX	+,-,-	SLC6A8,PNCK,PNCK	14894,1009,34
chr19:47738412-47739451	chr19	+	47738584	47738924	True	NM_001127241,NM_001127240,NM_001127242,NR_036159,NR_036158,NM_014417	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,+,-	BBC3,BBC3,BBC3,MIR3191,MIR3190,BBC3	-2561,-2561,-2561,-8308,-8441,-4133
chr1:153895825-153896334	chr1	+	153895908	153896367	True	NM_130898,NM_020699	chr1,chr1	+,-	CREB3L4,GATAD2B	44029,-457
chr5:171615904-171617589	chr5	+	171616113	171617229	True	NM_005990,NM_001171183	chr5,chr5	-,+	STK10,EFCAB9	-767,3946
chrX:70522391-70523326	chrX	+	70522441	70523252	True	NM_001171162,NM_012278	chrX,chrX	-,+	ZMYM3,ITGB1BP2	-47394,-864
chr1:99142987-99143356	chr1	+	99143021	99143161	True	NM_001010861,NR_033716	chr1,chr1	-,+	LPPR5,SNX7	327340,-15845
chr17:1361233-1361621	chr17	+	1361439	1361531	True	NM_005206,NM_016823,NR_028514	chr17,chr17,chr17	-,-,+	CRK,CRK,LOC100306951	-1895,-1895,58681
chr5:176784446-176784960	chr5	+	176784482	176784830	True	NM_006816,NM_006480	chr5,chr5	-,+	LMAN2,RGS14	-5597,13
chr18:20714833-20715091	chr18	+	20714851	20715061	True	NR_023359,NM_001100619,NM_032933	chr18,chr18,chr18	+,+,-	CABLES1,CABLES1,C18orf45	-374,665,302914
chr19:29374690-29375092	chr19	+	29374718	29375126	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	80911,329060
chr7:19185666-19186464	chr7	+	19185711	19186505	True	NM_152898,NM_001204148	chr7,chr7	-,+	FERD3L,HDAC9	-667,-636870
chr7:144106956-144108248	chr7	+	144107043	144107967	True	NM_005435,NM_001080413	chr7,chr7	+,-	ARHGEF5,NOBOX	-54605,-6257
chr8:64081056-64081501	chr8	+	64081111	64081467	True	NM_152758,NM_000370	chr8,chr8	+,-	YTHDF3,TTPA	-41,-82499
chr6:14759996-14761403	chr6	+	14760260	14761107	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	485419,902235
chr21:45999833-46000226	chr21	+	45999889	46000029	True	NM_198694,NM_198687	chr21,chr21	-,+	KRTAP10-5,KRTAP10-4	502,-6334
chr12:133000311-133001812	chr12	+	133000420	133001795	True	NM_001142641,NM_001122636	chr12,chr12	+,-	FBRSL1,GALNT9	65361,-94515
chr6:289883-290759	chr6	+	290121	290797	True	NM_020185,NM_148959	chr6,chr6	+,-	DUSP22,HUS1B	1303,366217
chrX:2847988-2848220	chrX	+	2847987	2848277	True	NM_009589,NM_001011719,NM_001669	chrX,chrX,chrX	-,+,-	ARSD,ARSH,ARSD	-595,76376,-595
chr15:44488379-44489253	chr15	+	44488807	44489200	True	NM_032892,NM_138423	chr15,chr15	-,+	FRMD5,CASC4	-1378,91708
chr11:82756192-82758041	chr11	+	82756589	82758079	True	NM_015885,NR_033347	chr11,chr11	+,-	PCF11,SNORA70E	110057,-3949
chr9:73451641-73452687	chr9	+	73451721	73452735	True	NR_029621,NM_015110	chr9,chr9	-,+	MIR204,SMC5	-26721,-577894
chr8:94934835-94936785	chr8	+	94934930	94936519	True	NM_001161779,NM_001161780,NM_001161781,NM_001161778,NM_203390,NM_018444	chr8,chr8,chr8,chr8,chr8,chr8	+,+,+,+,-,+	PDP1,PDP1,PDP1,PDP1,RBM12B,PDP1	-5806,-5819,-5702,-4989,-181706,-5898
chr6:116860993-116862021	chr6	+	116861010	116862060	True	NM_001139444,NM_153036	chr6,chr6	-,+	BET3L,FAM26D	4763,-10874
chr17:13926313-13926716	chr17	+	13926357	13926653	True	NR_003261,NM_001007530	chr17,chr17	+,-	CDRT15P,CDRT15	1161,213547
chr17:13926313-13926716	chr17	-	14141321	14141617	False	NM_001007530,NM_006041	chr17,chr17	-,+	CDRT15,HS3ST3B1	-1171,62888
chr1:159770176-159772154	chr1	+	159770324	159771916	True	NM_001134233,NM_001004310	chr1,chr1	-,+	C1orf204,FCRL6	53271,256
chr6:42162008-42162788	chr6	+	42162041	42162777	True	NM_000409,NM_002098	chr6,chr6	+,-	GUCA1A,GUCA1B	-38948,-33
chr8:43146839-43147387	chr8	+	43147007	43147345	True	NR_027669,NM_001005365,NM_001002920	chr8,chr8,chr8	-,+,+	RNF170,POTEA,POTEA	-395141,239,239
chr6:41605438-41605654	chr6	+	41605468	41605696	True	NM_005586,NM_007162	chr6,chr6	+,-	MDFI,TFEB	498,97152
chr20:62682083-62682587	chr20	+	62682150	62682632	True	NM_198723,NM_018419	chr20,chr20	+,-	TCEA2,SOX18	5806,-1171
chr1:117555254-117556936	chr1	+	117555371	117556951	True	NM_001145635,NM_004258	chr1,chr1	-,+	TRIM45,CD101	107510,-11042
chr8:41503195-41503947	chr8	+	41503213	41503994	True	NM_152568,NM_178819	chr8,chr8	-,+	NKX6-3,AGPAT6	934,-67557
chr19:14184882-14185144	chr19	+	14184937	14185101	True	NR_024282,NM_001145028	chr19,chr19	+,-	LOC113230,PALM3	-1167,-14966
chr15:40545178-40545483	chr15	+	40545292	40545502	True	NM_020168,NM_001039905	chr15,chr15	+,-	PAK6,C15orf56	-13308,-182
chr5:175672017-175672712	chr5	+	175672061	175672744	True	NR_036494,NM_198567	chr5,chr5	-,+	LOC643201,C5orf25	-45763,-6748
chr5:175672017-175672712	chr5	-	177091903	177092498	False	NR_026921,NM_007255	chr5,chr5	-,+	LOC202181,B4GALT7	6832,-64836
chr7:99745947-99746276	chr7	+	99746096	99746274	True	NM_018275,NM_001008395	chr7,chr7	-,+	C7orf43,C7orf59	10078,255
chr9:6724822-6725579	chr9	+	6724821	6725393	True	NM_000170,NM_001146696	chr9,chr9	-,+	GLDC,KDM4C	-79129,-4015
chr7:129935742-129937487	chr7	+	129935828	129937171	True	NM_032842,NM_001163446,NM_016352	chr7,chr7,chr7	-,+,+	TMEM209,CPA4,CPA4	-90490,-2906,-2906
chr1:248019084-248020044	chr1	+	248019213	248019831	True	NM_015431,NM_001001959	chr1,chr1	+,-	TRIM58,OR11L1	669,-14015
chr19:43848110-43848503	chr19	+	43848437	43848533	True	NM_020406,NR_026881,NM_002784	chr19,chr19,chr19	+,+,-	CD177,PRG1,PSG9	9291,4674,-74755
chr19:7740606-7741744	chr19	+	7740836	7741764	True	NM_001042461,NM_001193374,NM_174894,NM_174918,NM_002002,NM_020415,NM_001042462	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,-,+,+	TRAPPC5,RETN,TRAPPC5,C19orf59,FCER2,RETN,TRAPPC5	3999,-6915,3996,178,25318,-6915,3942
chr19:50665944-50666171	chr19	+	50665987	50666071	True	NM_001145809,NM_152358	chr19,chr19	+,-	MYH14,IZUMO2	40813,517
chr15:45323370-45323929	chr15	+	45323545	45323804	True	NR_034039,NM_003104,NM_014080	chr15,chr15,chr15	+,+,-	SORD,SORD,DUOX2	-8294,-8294,82614
chr4:103265168-103265392	chr4	+	103265198	103265433	True	NM_001165412,NM_022154,NM_001135147,NM_001135146	chr4,chr4,chr4,chr4	+,-,-,-	NFKB1,SLC39A8,SLC39A8,SLC39A8	157052,966,1028,1273
chr12:33577483-33579071	chr12	+	33577866	33579111	True	NM_198992,NM_032834	chr12,chr12	-,+	SYT10,ALG10	13694,596104
chr2:69871138-69871529	chr2	+	69871249	69871571	True	NM_014911,NM_001153	chr2,chr2	-,+	AAK1,ANXA4	-272,97555
chr2:175532467-175533029	chr2	+	175532480	175533020	True	NM_024583,NM_001077269	chr2,chr2	+,-	SCRN3,WIPF1	-272074,14657
chr22:19115734-19117605	chr22	+	19115787	19117406	True	NM_053006,NM_005137,NM_001173533,NM_001184781,NM_001173534,NR_033674	chr22,chr22,chr22,chr22,chr22,chr22	+,-,-,-,-,-	TSSK2,DGCR2,DGCR2,DGCR2,DGCR2,DGCR2	914,-5820,-5820,-5820,-5820,-5820
chr4:86392088-86393754	chr4	+	86392397	86393700	True	NM_001025616,NM_014991	chr4,chr4	+,-	ARHGAP24,WDFY3	2583,-504853
chr20:43372829-43373422	chr20	+	43372855	43373381	True	NM_182970,NM_022358	chr20,chr20	-,+	RIMS4,KCNK15	65581,1106
chr1:84621885-84623879	chr1	+	84622063	84622925	True	NM_182948,NM_024686	chr1,chr1	+,-	PRKACB,TTLL7	-12162,-157230
chr2:135767228-135769029	chr2	+	135767227	135768588	True	NM_001018046,NM_001172435	chr2,chr2	-,+	YSK4,RAB3GAP1	13710,41246
chr2:74711286-74711877	chr2	+	74711429	74711920	True	NM_032779,NR_027749,NM_022492	chr2,chr2,chr2	-,+,+	CCDC142,TTC31,TTC31	-1072,-1286,-1286
chr21:45527937-45528686	chr21	+	45528011	45528532	True	NM_005049,NM_015259	chr21,chr21	+,-	PWP2,ICOSLG	-854,132353
chr3:193968741-193969741	chr3	+	193968906	193969714	True	NR_024480,NM_005524	chr3,chr3	-,+	LOC100131551,HES1	60929,-115026
chr1:151759785-151761625	chr1	+	151760038	151761434	True	NM_016178,NM_006862,NM_001083963,NM_001083965,NM_001083964	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	OAZ3,TDRKH,TDRKH,TDRKH,TDRKH	-20965,1626,1626,1626,1626
chr5:133757456-133758624	chr5	+	133757863	133758647	True	NM_003337,NM_080656	chr5,chr5	+,-	UBE2B,CDKN2AIPNL	-51052,-10265
chr17:58042402-58042833	chr17	+	58042402	58042546	True	NM_003161,NM_016125	chr17,chr17	+,-	RPS6KB1,RNFT1	-72010,-285
chr14:71952007-71953650	chr14	+	71952703	71953701	True	NR_027046,NM_033141	chr14,chr14	+,-	LOC145474,MAP3K9	876,-676815
chr15:60914169-60914818	chr15	+	60914251	60914543	True	NM_012182,NM_002943,NM_134260	chr15,chr15,chr15	+,-,-	FOXB1,RORA,RORA	-617884,5240,5240
chr2:26097554-26098815	chr2	+	26097583	26098672	True	NM_018263,NM_016131	chr2,chr2	-,+	ASXL2,RAB10	2699,158056
chr16:2385966-2387533	chr16	+	2386128	2386784	True	NR_003574,NM_001089	chr16,chr16	+,-	ABCA17P,ABCA3	4138,4020
chr8:39796988-39797761	chr8	+	39797228	39797803	True	NM_194294,NM_001464	chr8,chr8	+,-	IDO2,ADAM2	-4813,-101449
chr3:36898053-36898320	chr3	+	36898069	36898305	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	88293,136535
chr14:20924015-20925174	chr14	+	20924065	20925223	True	NM_001641,NM_017807,NM_001100814,NM_080649,NM_080648,NM_144568	chr14,chr14,chr14,chr14,chr14,chr14	+,-,-,+,+,-	APEX1,OSGEP,TMEM55B,APEX1,APEX1,TMEM55B	-826,-798,4464,-826,-826,4464
chr9:131464134-131464386	chr9	+	131464133	131464225	True	NM_013355,NM_032799	chr9,chr9	+,-	PKN3,ZDHHC12	576,22235
chr20:61149871-61150319	chr20	+	61150125	61150337	True	NR_033263,NR_029780,NM_178463	chr20,chr20,chr20	-,+,+	C20orf200,MIR1-1,C20orf166	-1357,1175,-2516
chr12:8392558-8392773	chr12	+	8392610	8392676	True	NR_024254,NR_026788	chr12,chr12	-,+	LOC653113,FAM66C	2920,-59857
chr1:60289970-60291807	chr1	+	60290200	60291817	True	NM_000775,NM_015888	chr1,chr1	-,+	CYP2J2,HOOK1	100661,-9734
chr6:28184428-28185397	chr6	+	28184438	28185211	True	NR_002936,NM_001199479,NM_006299,NM_001199480	chr6,chr6,chr6,chr6	-,+,+,+	LOC222699,ZNF193,ZNF193,ZNF193	1546,7817,7817,7817
chr17:20527349-20527731	chr17	+	20527577	20527731	True	NM_001190790,NR_029393	chr17,chr17	+,-	CDRT15L2,KRT16P3	-44600,-119766
chr1:159914189-159914805	chr1	+	159914511	159914782	True	NM_001135050,NM_033438,NM_001146173,NM_020125,NM_001146172,NM_020789	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,-	IGSF9,SLAMF9,SLAMF9,SLAMF8,SLAMF9,IGSF9	654,9312,9312,-118083,9312,654
chr4:155285050-155286959	chr4	+	155285192	155286496	True	NM_017639,NM_001184741	chr4,chr4	-,+	DCHS2,FGB	26003,197635
chr22:17679816-17680142	chr22	+	17679854	17680070	True	NM_177405,NR_024483	chr22,chr22	-,+	CECR1,CECR4	525,-39631
chr15:66681031-66681335	chr15	+	66681040	66681235	True	NM_002755,NM_017858	chr15,chr15	+,-	MAP2K1,TIPIN	-1880,-31986
chr15:66640550-66642390	chr15	+	66640612	66642282	True	NM_017858,NR_004388,NM_002755	chr15,chr15,chr15	-,-,+	TIPIN,SCARNA14,MAP2K1	6829,-932,36928
chr1:2004634-2004923	chr1	+	2004807	2004889	True	NM_001080484,NM_001033581	chr1,chr1	-,+	KIAA1751,PRKCZ	-69531,196
chr22:18110972-18111322	chr22	+	18111033	18111253	True	NM_015367,NM_001039366,NM_001039367,NM_001696	chr22,chr22,chr22,chr22	+,-,-,-	BCL2L13,ATP6V1E1,ATP6V1E1,ATP6V1E1	10231,385,385,385
chrX:48336387-48336702	chrX	+	48336420	48336738	True	NM_012280,NM_033518,NM_177439,NM_177434	chrX,chrX,chrX,chrX	+,-,+,+	FTSJ1,SLC38A5,FTSJ1,FTSJ1	-1922,-7776,-1922,-91
chr5:1550173-1550550	chr5	+	1550319	1550521	True	NM_024830,NM_004553	chr5,chr5	-,+	LPCAT1,NDUFS6	-26243,250974
chr21:46493508-46493806	chr21	+	46493508	46493777	True	NM_001112,NM_001160230,NR_027292,NM_015834,NR_027674,NR_027672,NR_027673,NM_015833	chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21	+,+,-,+,+,+,+,+	ADARB1,ADARB1,C21orf122,ADARB1,ADARB1,ADARB1,ADARB1,ADARB1	715,715,-382,715,715,715,715,715
chr10:70845895-70846406	chr10	+	70845982	70846292	True	NM_001057,NR_036430,NM_002727	chr10,chr10,chr10	-,+,+	TACR2,SRGN,SRGN	330442,1535,1535
chr5:125799430-125800178	chr5	+	125799731	125800058	True	NM_001146322,NM_001182	chr5,chr5	+,-	GRAMD3,ALDH7A1	728,131075
chr17:3184821-3185339	chr17	+	3184839	3185377	True	NM_002551,NR_024128	chr17,chr17	-,+	OR3A2,OR3A4	-2571,28161
chr6:168480484-168480780	chr6	+	168480537	168480829	True	NM_030615,NM_001122841,NM_024919	chr6,chr6,chr6	+,-,-	KIF25,FRMD1,FRMD1	-62035,-4005,-698
chr10:97908631-97909801	chr10	+	97908947	97909723	True	NM_014803,NR_036113	chr10,chr10	+,-	ZNF518A,MIR3157	-19526,-84791
chr19:4399565-4400230	chr19	+	4399715	4399967	True	NM_001199943,NM_003025,NM_005483,NM_001199944	chr19,chr19,chr19,chr19	-,-,+,-	SH3GL1,SH3GL1,CHAF1A,SH3GL1	648,648,2692,498
chr9:139380018-139380887	chr9	+	139380050	139380870	True	NM_152571,NM_014866	chr9,chr9	+,-	C9orf163,SEC16A	-2154,-2543
chr6:26099700-26100332	chr6	+	26099768	26100383	True	NM_003542,NM_005323	chr6,chr6	+,-	HIST1H4C,HIST1H1T	3792,8034
chr1:100521734-100523001	chr1	+	100522702	100522973	True	NM_033055,NM_194292	chr1,chr1	+,-	HIAT1,SASS6	-18971,75588
chr5:140710523-140711825	chr5	+	140710527	140711843	True	NM_005642,NM_018915,NM_032009,NM_018912,NM_031993	chr5,chr5,chr5,chr5,chr5	-,+,+,+,+	TAF7,PCDHGA2,PCDHGA2,PCDHGA1,PCDHGA1	-10176,6510,6510,-326,-326
chr3:43750387-43751256	chr3	+	43750449	43751191	True	NM_001204834,NM_016006	chr3,chr3	-,+	ANO10,ABHD5	-86889,-18131
chr19:30101276-30102131	chr19	+	30101414	30102132	True	NM_001031726,NR_027368,NM_006627	chr19,chr19,chr19	-,+,+	C19orf12,POP4,POP4	103881,-4295,-4295
chr1:202937190-202938195	chr1	+	202937279	202938211	True	NM_016243,NM_001127687,NM_015999,NM_138391	chr1,chr1,chr1,chr1	-,-,-,+	CYB5R1,ADIPOR1,ADIPOR1,TMEM183A	-875,-9579,-9794,38322
chr12:33140323-33142174	chr12	+	33140581	33142213	True	NM_004572,NM_012063	chr12,chr12	-,+	PKP2,DNM1L	-90801,-308495
chr5:10604462-10605281	chr5	+	10604650	10605110	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-40266,156327
chr20:35886161-35886415	chr20	+	35886167	35886418	True	NM_021081,NM_001003897,NM_001184731	chr20,chr20,chr20	-,+,-	GHRH,MANBAL,GHRH	-868,31632,-868
chr10:14372822-14373128	chr10	+	14372825	14373093	True	NR_031668,NM_018027	chr10,chr10	+,-	MIR1265,FRMD4A	105481,-15
chr18:43310400-43311016	chr18	+	43310400	43311016	True	NM_015865,NM_001146037,NM_001146036,NM_020964,NM_001128588	chr18,chr18,chr18,chr18,chr18	+,+,+,-,+	SLC14A1,SLC14A1,SLC14A1,EPG5,SLC14A1	-6364,-3538,-6364,236339,-6364
chrX:47093014-47093321	chrX	+	47093028	47093317	True	NR_024235,NM_004651	chrX,chrX	-,+	NDUFB11,USP11	-88419,-765
chr15:73070616-73071882	chr15	+	73070780	73071459	True	NM_031284,NR_023319,NR_023318,NM_033028	chr15,chr15,chr15,chr15	-,-,-,+	ADPGK,ADPGK,ADPGK,BBS4	4722,4722,4722,-92322
chr19:32834363-32835219	chr19	+	32834445	32835222	True	NM_014910,NM_001136156,NM_032139	chr19,chr19,chr19	+,+,-	ZNF507,ZNF507,ANKRD27	1291,1291,330938
chr13:21835261-21835540	chr13	+	21835272	21835494	True	NM_145061,NM_024026	chr13,chr13	-,+	SKA3,MRP63	-84531,-84951
chr13:21835261-21835540	chr13	-	20134380	20134454	False	NM_199254,NM_017520	chr13,chr13	-,+	TPTE2,MPHOSPH8	-23477,73333
chr7:148824731-148825558	chr7	+	148824882	148825526	True	NM_001001661,NM_020781	chr7,chr7	-,+	ZNF425,ZNF398	-1444,-1425
chr5:157159312-157160834	chr5	+	157159791	157160405	True	NM_017872,NM_178424	chr5,chr5	+,-	THG1L,SOX30	-1519,-80363
chr11:9334306-9335689	chr11	+	9334648	9335633	True	NM_006391,NM_001165030,NM_015012,NR_028491	chr11,chr11,chr11,chr11	+,-,-,-	IPO7,TMEM41B,TMEM41B,TMEM41B	70535,714,714,714
chr3:178262257-178263335	chr3	+	178262356	178263372	True	NM_022470,NM_181361	chr3,chr3	-,+	ZMAT3,KCNMB2	526334,-8193
chr12:112037890-112038597	chr12	+	112038040	112038446	True	NM_001136538,NM_002973	chr12,chr12	+,-	ACAD10,ATXN2	85410,-560
chr14:24656746-24657658	chr14	+	24656783	24657635	True	NM_024658,NM_006405,NM_005132,NM_001014842	chr14,chr14,chr14,chr14	-,-,+,-	IPO4,TM9SF1,REC8,TM9SF1	539,7297,-15600,7297
chr5:112043611-112043979	chr5	+	112043853	112044013	True	NM_001127511,NM_005669	chr5,chr5	+,-	APC,REEP5	-702,214068
chrX:107333460-107334427	chrX	+	107333821	107334422	True	NM_052936,NM_178270,NM_002814,NM_170750	chrX,chrX,chrX,chrX	+,+,-,-	ATG4A,ATG4A,PSMD10,PSMD10	476,476,502,502
chr13:41496015-41496364	chr13	+	41496043	41496197	True	NR_030352,NR_003365	chr13,chr13	+,-	MIR621,SUGT1P3	-111192,-157
chr15:79382325-79382525	chr15	+	79382513	79382573	True	NM_001145648,NR_029705,NM_002891	chr15,chr15,chr15	-,+,-	RASGRF1,MIR184,RASGRF1	692,119556,692
chr1:247507665-247507875	chr1	+	247507803	247507869	True	NM_032752,NM_001079821	chr1,chr1	-,+	ZNF496,NLRP3	-12758,71588
chr19:8477052-8477519	chr19	+	8477117	8477251	True	NM_016496,NM_001005416,NM_001005415,NM_198471	chr19,chr19,chr19,chr19	+,+,+,-	MARCH2,MARCH2,MARCH2,KANK3	935,935,935,-68971
chr7:32931845-32932102	chr7	+	32931932	32932098	True	NM_015483,NM_007270	chr7,chr7	-,+	KBTBD2,FKBP9	-464,64906
chr15:90543788-90544013	chr15	+	90543813	90543969	True	NM_182616,NM_198526	chr15,chr15	-,+	C15orf38,ZNF710	-87591,782
chr1:226074668-226075067	chr1	+	226074839	226075105	True	NM_020997,NM_000120,NM_014698	chr1,chr1,chr1	-,+,-	LEFTY1,EPHX1,TMEM63A	1791,-61888,-4419
chr19:33687650-33687975	chr19	+	33687655	33688015	True	NM_002333,NM_019849	chr19,chr19	+,-	LRP3,SLC7A10	-2107,28791
chr7:98970236-98970584	chr7	+	98970284	98970578	True	NM_005720,NM_014891	chr7,chr7	+,-	ARPC1B,PDAP1	1719,35777
chr4:1243209-1243446	chr4	+	1243213	1243465	True	NM_001012614,NR_033339,NM_001328	chr4,chr4,chr4	-,+,-	CTBP1,C4orf42,CTBP1	-305,-36,-305
chr19:15575145-15575650	chr19	+	15575194	15575684	True	NM_022904,NR_031716	chr19,chr19	-,+	RASAL3,MIR1470	188,-14886
chr14:60559422-60561340	chr14	+	60559426	60561281	True	NM_022495,NM_016029	chr14,chr14	+,-	C14orf135,DHRS7	-848,70980
chrX:153047359-153047577	chrX	+	153047469	153047555	True	NM_014370,NM_001170760,NM_001170761,NM_004135	chrX,chrX,chrX,chrX	+,+,+,-	SRPK3,SRPK3,SRPK3,IDH3G	-1064,-1064,-1064,12462
chr17:73153031-73154074	chr17	+	73153091	73153970	True	NM_016185,NM_001002032,NM_001002033,NM_024585,NM_024844	chr17,chr17,chr17,chr17,chr17	-,-,-,+,+	HN1,HN1,HN1,ARMC7,NUP85	-2316,-2317,-2317,-47060,47626
chr2:109603845-109604171	chr2	+	109603936	109604220	True	NM_022336,NM_001099289	chr2,chr2	-,+	EDAR,SH3RF3	1658,141776
chr20:273162-274803	chr20	+	273467	274578	True	NM_033089,NM_153269	chr20,chr20	+,-	ZCCHC3,C20orf96	3625,-2077
chr6:38664976-38665837	chr6	+	38664993	38665830	True	NM_006708,NM_001371	chr6,chr6	-,+	GLO1,DNAH8	5173,24721
chr8:119964159-119964388	chr8	+	119964159	119964233	True	NM_002546,NM_006438	chr8,chr8	-,+	TNFRSF11B,COLEC10	206,115190
chrX:152759272-152759635	chrX	+	152759299	152759627	True	NM_001711,NM_017518	chrX,chrX	+,-	BGN,HAUS7	719,-22696
chrY:15010744-15012454	chrY	+	15010744	15012097	True	NM_004660,NM_001122665,NR_033667	chrY,chrY,chrY	+,+,-	DDX3Y,DDX3Y,GYG2P1	4601,3921,-477355
chr16:67978214-67978443	chr16	+	67978224	67978443	True	NM_006742,NM_002801,NM_000229	chr16,chr16,chr16	+,-,-	PSKH1,PSMB10,LCAT	-51100,-7444,-209
chr3:42542720-42543134	chr3	+	42542834	42543068	True	NM_004624,NM_001201584	chr3,chr3	+,-	VIPR1,SEC22C	1035,80502
chr1:109398330-109400116	chr1	+	109398885	109400140	True	NM_152763,NR_034168	chr1,chr1	-,+	AKNAD1,LOC642864	-22,49
chr4:9540156-9541076	chr4	+	9540641	9540722	True	NR_031688,NM_001040448	chr4,chr4	-,+	MIR548I2,DEFB131	17274,-94444
chr7:140393802-140395222	chr7	+	140393808	140395125	True	NM_004546,NR_024454	chr7,chr7	+,-	NDUFB2,LOC100134713	1355,1817
chr6:134500355-134501981	chr6	+	134500451	134501741	True	NM_004865,NM_001143678,NM_005627,NM_001143677	chr6,chr6,chr6,chr6	+,-,-,-	TBPL1,SGK1,SGK1,SGK1	-226208,-3381,-4417,-1441
chr1:154935718-154936799	chr1	+	154936094	154936660	True	NM_001826,NM_183001,NM_020524,NM_138300,NM_001130040	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	CKS1B,SHC1,PBXIP1,PYGO2,SHC1	10457,6613,-7527,-1836,6613
chr10:101190907-101191160	chr10	+	101190963	101191209	True	NM_002079,NM_145285	chr10,chr10	-,+	GOT1,NKX2-3	-433,101480
chr19:6719539-6719829	chr19	+	6719548	6719874	True	NM_004240,NM_000064	chr19,chr19	+,-	TRIP10,C3	19832,838
chr21:19255219-19256643	chr21	+	19255297	19256361	True	NM_001204175,NR_024354	chr21,chr21	+,-	CHODL,NCRNA00157	33295,1614
chr7:42950638-42951025	chr7	+	42950644	42951044	True	NM_024054,NM_001099858,NM_031903	chr7,chr7,chr7	-,-,+	C7orf25,C7orf25,MRPL32	695,695,20894
chr6:125383881-125384614	chr6	+	125384001	125384635	True	NR_026876,NM_152553	chr6,chr6	-,+	STL,RNF217	-99828,-79550
chr17:16744501-16745631	chr17	+	16744727	16745679	True	NR_026810,NR_029392	chr17,chr17	+,-	FAM106C,KRT16P2	-52721,-8580
chr17:16744501-16745631	chr17	-	18333691	18334049	False	NM_148918,NR_001443	chr17,chr17	-,+	SHMT1,LOC339240	-66835,-8247
chr17:16744501-16745631	chr17	+	20416986	20417344	False	NM_001190790,NR_029393	chr17,chr17	+,-	CDRT15L2,KRT16P3	65692,-9175
chr19:2266818-2267360	chr19	+	2266830	2267239	True	NM_004152,NM_144616	chr19,chr19	+,-	OAZ1,JSRP1	2280,-10408
chr2:237481318-237482086	chr2	+	237481399	237482085	True	NM_020311,NM_024726	chr2,chr2	+,-	CXCR7,IQCA1	-3070,-65307
chr8:144121163-144121990	chr8	+	144121280	144122018	True	NR_026913,NM_173687	chr8,chr8	-,+	LOC100133669,C8orf31	-21473,-652
chr18:60192375-60193823	chr18	+	60192375	60193652	True	NM_176787,NM_017742	chr18,chr18	-,+	PIGN,ZCCHC2	-338086,-1770
chr22:22304081-22305040	chr22	+	22304198	22304976	True	NM_148176,NM_014634	chr22,chr22	+,-	PPIL2,PPM1F	-283976,2331
chr11:111941040-111942589	chr11	+	111941110	111942423	True	NM_138789,NM_001082969,NM_018195,NM_001082619,NM_001082970	chr11,chr11,chr11,chr11,chr11	-,+,+,-,+	PIH1D2,C11orf57,C11orf57,PIH1D2,C11orf57	2522,2544,2544,2522,2544
chr21:36263246-36263653	chr21	+	36263453	36263651	True	NR_024351,NM_001001890,NM_001122607	chr21,chr21,chr21	+,-,-	NCRNA00160,RUNX1,RUNX1	-167399,-2466,-2466
chr12:2905114-2905758	chr12	+	2905388	2905782	True	NM_002014,NR_033958	chr12,chr12	+,-	FKBP4,LOC283440	-1331,-24553
chr16:8765146-8766283	chr16	+	8765395	8766052	True	NM_020686,NM_015421	chr16,chr16	+,-	ABAT,TMEM186	2391,125520
chr11:69922086-69923652	chr11	+	69922335	69923501	True	NM_005247,NM_018043,NR_030691	chr11,chr11,chr11	-,+,+	FGF3,ANO1,ANO1	-288143,906,8014
chr7:128096172-128096809	chr7	+	128096214	128096666	True	NM_183243,NM_001098786,NM_013332	chr7,chr7,chr7	-,+,+	IMPDH1,C7orf68,C7orf68	-46178,-381,-381
chr10:12237016-12237756	chr10	+	12237251	12237549	True	NM_014142,NM_006023	chr10,chr10	-,+	NUDT5,CDC123	644,411
chr19:16221653-16221912	chr19	+	16221658	16221764	True	NM_005370,NM_054113	chr19,chr19	+,-	RAB8A,CIB3	725,62572
chr15:34506158-34507818	chr15	+	34506308	34507157	True	NM_024713,NM_016454	chr15,chr15	-,+	C15orf29,TMEM85	-4011,10087
chr16:613268-613586	chr16	+	613280	613494	True	NM_176677,NM_148920,NM_145270,NR_024121,NM_004204	chr16,chr16,chr16,chr16,chr16	+,+,+,-,+	NHLRC4,PIGQ,C16orf11,NCRNA00235,PIGQ	3537,6509,-2909,-35873,6509
chr19:58400431-58402424	chr19	+	58400467	58402086	True	NM_001144989,NM_032828	chr19,chr19	-,+	ZNF814,ZNF587	-25,-39337
chr10:16859397-16859615	chr10	+	16859446	16859588	True	NM_012425,NM_030664,NM_152724	chr10,chr10,chr10	-,+,-	RSU1,PTER,RSU1	7,-380530,7
chr1:226407293-226408373	chr1	+	226407593	226408343	True	NM_022735,NM_031944	chr1,chr1	-,+	ACBD3,MIXL1	-33170,3039
chr9:86594235-86594443	chr9	+	86594243	86594491	True	NM_002140,NR_029605,NM_031263,NM_031262,NM_024945	chr9,chr9,chr9,chr9,chr9	-,-,-,-,+	HNRNPK,MIR7-1,HNRNPK,HNRNPK,RMI1	1128,-9471,743,1128,1145
chr16:18938018-18938527	chr16	+	18938095	18938316	True	NM_015092,NM_024847	chr16,chr16	-,+	SMG1,TMC7	-369,56939
chr16:18938018-18938527	chr16	+	29607092	29607152	False	NR_002593,NM_001030288	chr16,chr16	-,+	SLC7A5P1,SPN	17936,67147
chr16:18812237-18812651	chr16	+	18812251	18812549	True	NM_015161,NM_024847	chr16,chr16	-,+	ARL6IP1,TMC7	358,182706
chr15:45545476-45547173	chr15	+	45545775	45547138	True	NM_138356,NM_004212	chr15,chr15	-,+	SHF,SLC28A2	-52402,-1398
chr7:150210559-150211028	chr7	+	150210635	150210999	True	NM_024711,NM_153236	chr7,chr7	-,+	GIMAP6,GIMAP7	118731,945
chr15:74171165-74172328	chr15	+	74171212	74172225	True	NM_004809,NM_153356	chr15,chr15	-,+	STOML1,TBC1D21	112463,-5295
chr9:33403671-33404011	chr9	+	33403676	33404060	True	NM_001170,NM_002504	chr9,chr9	-,+	AQP7,NFX1	-1159,-113309
chr9:33403671-33404011	chr9	-	42856542	42856911	False	NR_026759,NR_026558	chr9,chr9	-,+	FAM95B1,AQP7P3	176770,1240
chr9:33403671-33404011	chr9	+	69652442	69652499	False	NM_001085457,NR_024443	chr9,chr9	-,+	CBWD6,LOC100133920	-389849,-1139
chr9:33403671-33404011	chr9	-	67029529	67029900	False	NR_024443,NR_024496	chr9,chr9	-,+	LOC100133920,LOC442421	1453,-535632
chr9:33403671-33404011	chr9	+	67290491	67290548	False	NM_032250,NR_002817	chr9,chr9	+,-	ANKRD20A1,AQP7P1	636212,-999
chr7:1651673-1652070	chr7	+	1651742	1651964	True	NM_001134340,NR_001288	chr7,chr7	-,+	PSMG3,TFAMP1	-42074,2141
chr3:121730637-121732250	chr3	+	121730836	121732021	True	NM_175924,NM_175862,NM_001199800,NM_001199799	chr3,chr3,chr3,chr3	-,+,-,-	ILDR1,CD86,ILDR1,ILDR1	9164,42199,9164,9164
chr3:132439624-132439852	chr3	+	132439628	132439757	True	NR_002811,NR_037804,NM_153240	chr3,chr3,chr3	+,-,-	NCRNA00119,NPHP3-ACAD11,NPHP3	1428,1601,1601
chr12:56436143-56436398	chr12	+	56436167	56436447	True	NM_006928,NM_001029	chr12,chr12	-,+	PMEL,RPS26	-75671,-532
chr6:37401396-37401954	chr6	+	37401504	37401937	True	NM_015050,NM_138493	chr6,chr6	+,-	FTSJD2,C6orf129	-648,65817
chr7:37955697-37956040	chr7	+	37955701	37956001	True	NM_003014,NM_017549	chr7,chr7	-,+	SFRP4,EPDR1	574,4161
chr3:101230957-101231419	chr3	+	101231034	101231439	True	NM_001077203,NM_020654,NR_036433	chr3,chr3,chr3	-,-,+	SENP7,SENP7,FAM172B	696,696,6276
chr22:24308464-24308761	chr22	+	24308555	24308797	True	NM_000854,NM_001080843,NM_001084393,NM_001084392	chr22,chr22,chr22,chr22	-,-,+,-	GSTT2,GSTT2B,DDTL,DDT	-5162,-5187,228,7933
chr22:24308464-24308761	chr22	+	24372584	24372639	False	NM_001144931,NM_000853	chr22,chr22	+,-	LOC391322,GSTT1	477,11700
chr22:24308464-24308761	chr22	-	24316908	24317150	False	NM_001084393,NM_001355,NM_000854,NM_001084392	chr22,chr22,chr22,chr22	+,-,+,-	DDTL,DDT,GSTT2,DDT	-7933,4919,5163,-228
chr2:10280296-10280692	chr2	+	10280479	10280741	True	NR_036222,NM_182626	chr2,chr2	-,+	MIR4261,C2orf48	52108,767
chr10:120403079-120403326	chr10	+	120403137	120403301	True	NM_004248,NM_199461	chr10,chr10	-,+	PRLHR,NANOS1	-47977,385926
chr5:96016678-96017157	chr5	+	96016750	96017094	True	NM_001042440,NM_016442	chr5,chr5	+,-	CAST,ERAP1	-18896,126856
chr12:113620957-113622356	chr12	+	113620975	113622330	True	NM_024072,NM_001111322,NM_032848	chr12,chr12,chr12	-,-,+	DDX54,DDX54,C12orf52	1005,1005,1224
chr5:179219987-179220668	chr5	+	179220121	179220515	True	NM_054013,NR_031598,NM_145867	chr5,chr5,chr5	-,-,+	MGAT4B,MIR1229,LTC4S	9410,4881,470
chrX:2921481-2922386	chrX	+	2921967	2922237	True	NM_000047,NM_001011719	chrX,chrX	-,+	ARSE,ARSH	-39473,2416
chr18:61802433-61802910	chr18	+	61802510	61802812	True	NR_027245,NR_033881	chr18,chr18	-,+	C18orf20,LOC284294	13498,-31237
chr7:90443817-90444844	chr7	+	90444109	90444527	True	NM_006980,NM_012395	chr7,chr7	-,+	MTERF,CDK14	1065546,-105461
chr12:53694862-53695924	chr12	+	53694981	53695465	True	NM_021640,NM_002624,NM_001173466,NM_145897	chr12,chr12,chr12,chr12	+,+,-,+	C12orf10,PFDN5,AAAS,PFDN5	-1562,-5797,19997,-5797
chr13:53422443-53422830	chr13	+	53422451	53422843	True	NR_031582,NM_032949,NM_002590	chr13,chr13,chr13	+,-,-	MIR759,PCDH8,PCDH8	-38317,-18,-18
chr16:8893935-8894631	chr16	+	8894232	8894444	True	NM_000303,NM_015421	chr16,chr16	+,-	PMM2,TMEM186	-2625,-2727
chr4:113436841-113437050	chr4	+	113436958	113437042	True	NM_016648,NM_024019	chr4,chr4	+,-	LARP7,NEUROG2	121077,336
chr2:73434409-73434773	chr2	+	73434571	73434665	True	NM_006062,NM_032319,NM_001134462	chr2,chr2,chr2	+,-,+	SMYD5,C2orf7,NOTO	6700,25741,-5236
chr11:107730635-107731076	chr11	+	107730719	107731038	True	NM_017515,NM_017516	chr11,chr11	-,+	SLC35F2,RAB39	-805,68238
chr6:10561372-10562286	chr6	+	10561750	10562312	True	NR_027793,NM_001491	chr6,chr6	-,+	C6orf218,GCNT2	-126695,-5854
chrX:71263391-71263737	chrX	+	71263411	71263762	True	NR_002309,NM_001024455	chrX,chrX	+,-	RPS26P11,RGAG4	496,88039
chr9:138853422-138854406	chr9	+	138853441	138854393	True	NM_016172,NM_020822	chr9,chr9	-,+	UBAC1,KCNT1	-215,-259462
chr5:169075594-169075930	chr5	+	169075730	169075902	True	NM_001129891,NM_004946	chr5,chr5	-,+	FAM196B,DOCK2	331892,-11530
chr12:118814758-118815332	chr12	+	118814897	118815317	True	NM_022491,NM_016281	chr12,chr12	+,-	SUDS3,TAOK3	-590,-4147
chr22:29785024-29785395	chr22	+	29785160	29785230	True	NM_001127,NM_145730,NM_001166019,NM_021026	chr22,chr22,chr22,chr22	-,-,-,+	AP1B1,AP1B1,AP1B1,RFPL1	-588,-588,-588,49341
chr19:12176743-12177452	chr19	+	12177079	12177317	True	NM_001136501,NM_001080404	chr19,chr19	+,-	ZNF844,ZNF878	-1584,-9952
chr5:41041060-41041580	chr5	+	41041075	41041329	True	NM_000587,NM_173489	chr5,chr5	+,-	C7,HEATR7B2	-131533,30171
chr11:108463842-108464046	chr11	+	108463927	108464019	True	NM_015065,NM_004398	chr11,chr11	-,+	EXPH5,DDX10	405,71796
chr12:57143080-57144464	chr12	+	57143392	57144176	True	NM_000946,NM_003725	chr12,chr12	-,+	PRIM1,HSD17B6	2028,12931
chr1:94590009-94591733	chr1	+	94590285	94591767	True	NM_000350,NR_030621	chr1,chr1	-,+	ABCA4,MIR760	-3580,-277948
chr22:23853346-23853635	chr22	+	23853436	23853622	True	NM_153615,NM_020070	chr22,chr22	+,-	RGL4,IGLL1	179425,68923
chr19:14115242-14116318	chr19	+	14115389	14116353	True	NM_002918,NM_080864	chr19,chr19	-,+	RFX1,RLN3	831,22663
chr1:28446334-28447241	chr1	+	28446847	28447046	True	NR_027268,NM_016311	chr1,chr1	-,+	LOC653566,ATPIF1	-23778,115555
chr2:64069293-64069729	chr2	+	64069312	64069618	True	NM_006759,NM_001001521,NM_001005739	chr2,chr2,chr2	+,+,-	UGP2,UGP2,VPS54	-356,-1272,176646
chr17:74135190-74135564	chr17	+	74135232	74135556	True	NM_180990,NM_001454	chr17,chr17	+,-	ZACN,FOXJ1	-60020,1874
chr7:103630872-103631134	chr7	+	103630875	103631125	True	NM_005045,NM_173054,NM_199000	chr7,chr7,chr7	-,-,+	RELN,RELN,LHFPL3	-912,-912,337978
chr8:21881681-21881887	chr8	+	21881732	21881886	True	NM_024815,NM_182795	chr8,chr8	-,+	NUDT18,NPM2	85096,467
chr4:123546225-123546835	chr4	+	123546371	123546883	True	NM_001178007,NM_021803	chr4,chr4	+,-	BBS12,IL21	106973,-4160
chr14:55552891-55553401	chr14	+	55553069	55553257	True	NM_007086,NM_144578	chr14,chr14	-,+	WDHD1,MAPK1IP1L	-59250,-34764
chr3:170584672-170586337	chr3	+	170584856	170586001	True	NM_001099645,NM_001185056	chr3,chr3	-,+	RPL22L1,CLDN11	2094,-445890
chr7:23749305-23749665	chr7	+	23749407	23749649	True	NM_031414,NM_032944,NR_002711,NM_001122833	chr7,chr7,chr7,chr7	+,+,-,+	STK31,STK31,CLK2P,STK31	188,347,-123261,188
chr10:112627235-112627894	chr10	+	112627284	112627942	True	NM_014456,NR_026932,NM_145341,NM_001199492	chr10,chr10,chr10,chr10	+,-,+,+	PDCD4,LOC282997,PDCD4,PDCD4	3610,2770,3610,3610
chr15:45247809-45248804	chr15	+	45248305	45248850	True	NM_014080,NM_152448	chr15,chr15	-,+	DUOX2,C15orf43	157559,52
chrX:15701901-15703432	chrX	+	15702164	15703449	True	NM_020665,NR_026551	chrX,chrX	-,+	TMEM27,CA5BP1	-19010,-9183
chr22:42914836-42915050	chr22	+	42914867	42915051	True	NR_027786,NM_015703	chr22,chr22	+,-	SERHL,RRP7A	-18345,828
chr22:42914836-42915050	chr22	+	42976716	42977267	False	NR_002184,NM_014509	chr22,chr22	-,+	RRP7B,SERHL2	800,-27221
chr5:78404953-78406597	chr5	+	78405121	78406025	True	NM_013391,NM_001713	chr5,chr5	-,+	DMGDH,BHMT	-39672,1578
chr13:107185708-107186331	chr13	+	107185808	107186318	True	NM_004093,NR_034119	chr13,chr13	-,+	EFNB2,LOC728192	1120,-156948
chr6:56971198-56972727	chr6	+	56971426	56972470	True	NM_183227,NM_015555	chr6,chr6	-,+	RAB23,ZNF451	113838,-16656
chr8:71514928-71516497	chr8	+	71515002	71516249	True	NM_001011720,NM_014294	chr8,chr8	+,-	XKR9,TRAM1	65350,4496
chr11:64853014-64853949	chr11	+	64853028	64853751	True	NM_013265,NM_006782,NM_080668	chr11,chr11,chr11	+,+,-	C11orf2,ZFPL1,CDCA5	9931,-1385,-1413
chr2:163200300-163200767	chr2	+	163200324	163200766	True	NM_022168,NM_012198	chr2,chr2	-,+	IFIH1,GCA	-25285,-2
chr9:140319272-140319928	chr9	+	140319327	140319756	True	NM_006647,NM_017820	chr9,chr9	+,-	NOXA1,EXD3	-1533,-1613
chr18:11375683-11376061	chr18	+	11375712	11376097	True	NM_022068,NM_182978	chr18,chr18	-,+	FAM38B,GNAL	-226951,313038
chr8:144791094-144791531	chr8	+	144791096	144791522	True	NM_001162914,NM_139021	chr8,chr8	-,+	LOC100130274,MAPK15	-817,6984
chr10:98510547-98511499	chr10	+	98510718	98510819	True	NM_152309,NM_001170765	chr10,chr10	-,+	PIK3AP1,LCOR	-30439,81197
chr16:639736-639936	chr16	+	639747	639971	True	NM_001172665,NM_001172664,NM_001172666,NM_001040160,NM_001172663,NM_021168	chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,-,+,+	RAB40C,RAB40C,RAB40C,C16orf13,RAB40C,RAB40C	105,-129,105,46426,-441,201
chr7:129096817-129097888	chr7	+	129096865	129097871	True	NM_020704,NR_029614	chr7,chr7	+,-	FAM40B,MIR182	-22644,312511
chr16:69343908-69344649	chr16	+	69343908	69344556	True	NM_022341,NM_013245	chr16,chr16	-,+	PDF,VPS4A	19992,730
chr1:187235469-187237165	chr1	+	187235567	187237182	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-586008,-437590
chrX:48433257-48433874	chrX	+	48433301	48433873	True	NM_006743,NM_033518	chrX,chrX	+,-	RBM3,SLC38A5	-516,-104657
chr9:34610424-34610773	chr9	+	34610449	34610598	True	NM_000155,NM_024348,NM_148178,NM_148179,NM_007234	chr9,chr9,chr9,chr9,chr9	+,-,-,-,-	GALT,DCTN3,C9orf23,C9orf23,DCTN3	36036,9949,1554,1554,9949
chr1:110279990-110280284	chr1	+	110280049	110280264	True	NM_000851,NR_024537,NM_000849	chr1,chr1,chr1	+,-,-	GSTM5,GSTM3,GSTM3	-25236,3447,3447
chr8:145750379-145750842	chr8	+	145750464	145750840	True	NM_001001795,NM_001024678,NM_014665,NM_004260	chr8,chr8,chr8,chr8	-,-,+,-	C8orf82,LRRC24,LRRC14,RECQL4	3668,1626,-7153,-7254
chr2:177027978-177028226	chr2	+	177027977	177028264	True	NR_033979,NM_006898	chr2,chr2	-,+	LOC401022,HOXD3	25481,540
chr7:99756392-99756632	chr7	+	99756451	99756521	True	NM_018275,NM_024637,NM_001008395	chr7,chr7,chr7	-,-,+	C7orf43,GAL3ST4,C7orf59	-149,9902,-9972
chr1:13909808-13910207	chr1	+	13909915	13910221	True	NM_001006625,NM_001010847,NM_006474,NM_001006624,NM_198389	chr1,chr1,chr1,chr1,chr1	+,-,+,+,+	PDPN,LRRC38,PDPN,PDPN,PDPN	1745,-69673,30,1745,30
chr7:75040611-75041234	chr7	+	75040615	75041217	True	NR_003614,NR_033322	chr7,chr7	-,+	PMS2L2,NSUN5P1	-52400,-1050
chr7:75040611-75041234	chr7	-	72423689	72424291	False	NR_033323,NR_003602	chr7,chr7	-,+	NSUN5P2,LOC541473	1069,15900
chr1:160160866-160162008	chr1	+	160160995	160161755	True	NM_001231,NR_028106	chr1,chr1	+,-	CASQ1,DCAF8	-761,70572
chr17:43684349-43685556	chr17_ctg5_hap1	+	551009	551625	False	NM_001193465,NR_034172	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	KIAA1267,LOC644246	11872,43818
chr17:43684349-43685556	chr17_ctg5_hap1	-	1182769	1183388	False	NR_026901,NR_037772	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LOC644172,CRHR1	5050,-12316
chr17:43684349-43685556	chr17_ctg5_hap1	-	1402355	1402981	False	NR_002940,NM_016632	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LRRC37A4,ARL17A	78395,110963
chr17:43684349-43685556	chr17	+	43684788	43685405	True	NR_026901,NR_037772	chr17,chr17	-,+	LOC644172,CRHR1	-5040,12304
chr17:43684349-43685556	chr17	-	44314566	44315909	False	NM_001193465,NR_034172	chr17,chr17	-,+	KIAA1267,LOC644246	-11826,-43685
chr19:16605959-16606224	chr19	+	16606056	16606116	True	NM_145046,NM_032207	chr19,chr19	-,+	CALR3,C19orf44	937,1088
chr5:153784931-153785148	chr5	+	153785019	153785167	True	NR_037897,NM_001131062	chr5,chr5	-,+	FLJ38109,SAP30L	40265,40349
chr9:15306462-15306745	chr9	+	15306591	15306763	True	NM_001168341,NM_001168340,NM_001039697,NM_001168339,NM_152574	chr9,chr9,chr9,chr9,chr9	-,-,+,-,-	TTC39B,TTC39B,SNAPC3,TTC39B,TTC39B	645,645,116018,645,645
chr22:32854327-32855572	chr22	+	32854346	32855124	True	NM_174932,NM_012179	chr22,chr22	-,+	BPIL2,FBXO7	-973,15582
chr16:23521671-23521892	chr16	+	23521765	23521940	True	NM_019116,NM_015044	chr16,chr16	+,-	UBFD1,GGA2	46921,26
chr19:40463783-40465283	chr19	+	40464312	40465304	True	NM_003890,NM_006503	chr19,chr19	-,+	FCGBP,PSMC4	-23779,11768
chr19:40463783-40465283	chr19	-	40462991	40463156	False	NM_003890,NM_006503	chr19,chr19	-,+	FCGBP,PSMC4	-22458,13916
chr20:4722159-4722480	chr20	+	4722273	4722536	True	NR_024267,NR_024268,NR_024269,NM_012409	chr20,chr20,chr20,chr20	-,-,-,+	PRNT,PRNT,PRNT,PRND	-959,-959,-959,-19771
chr11:7695128-7695379	chr11	+	7695331	7695391	True	NM_003621,NM_016229	chr11,chr11	+,-	PPFIBP2,CYB5R2	-160381,-510
chr5:150538146-150539185	chr5	+	150538191	150539238	True	NM_000405,NM_001155	chr5,chr5	+,-	GM2A,ANXA6	93374,-748
chr1:153524934-153526721	chr1	+	153525274	153526756	True	NM_002960,NM_019554,NM_002961,NM_006271	chr1,chr1,chr1,chr1	-,-,-,+	S100A3,S100A4,S100A4,S100A1	-3540,-6992,-6992,74116
chr7:27281962-27282535	chr7	+	27281965	27282372	True	NM_001989,NM_000522	chr7,chr7	+,-	EVX1,HOXA13	-129,-42240
chr4:76600200-76600430	chr4	+	76600261	76600459	True	NM_203505,NM_203504,NM_012297,NM_003715	chr4,chr4,chr4,chr4	-,-,-,+	G3BP2,G3BP2,G3BP2,USO1	-1594,-1594,-1918,49369
chr1:200589114-200589481	chr1	+	200589125	200589520	True	NM_014875,NM_203459	chr1,chr1	-,+	KIF14,CAMSAP1L1	393,119165
chr1:200181687-200182092	chr1	+	200181704	200181974	True	NM_001105517,NM_012482	chr1,chr1	+,-	FAM58B,ZNF281	681,197242
chr16:4355583-4355860	chr16	+	4355583	4355901	True	NM_032575,NM_003223	chr16,chr16	+,-	GLIS2,TFAP4	26323,-32582
chr1:204186096-204186906	chr1	+	204186109	204186933	True	NM_005686,NM_198447	chr1,chr1	+,-	SOX13,GOLT1A	-143914,-2889
chr5:150461401-150462238	chr5	+	150461578	150462258	True	NM_002084,NM_006058	chr5,chr5	+,-	GPX3,TNIP1	-61630,-581
chr5:141305736-141307656	chr5	+	141305858	141307690	True	NM_016580,NM_014773,NR_033244,NM_001142603	chr5,chr5,chr5,chr5	-,+,-,+	PCDH12,KIAA0141,LOC729080,KIAA0141	30987,-2524,-29598,-2524
chr2:233793068-233793272	chr2	+	233793219	233793283	True	NM_001114090,NM_206895	chr2,chr2	-,+	NGEF,C2orf82	-358,-58276
chrX:99193623-99194348	chrX	+	99193622	99194392	True	NM_022144,NR_024608	chrX,chrX	+,-	TNMD,LOC442459	645397,499
chr12:7342659-7343034	chr12	+	7342867	7343059	True	NM_000319,NM_031491,NM_001131026,NM_001131024,NM_001131025,NM_001131023	chr12,chr12,chr12,chr12,chr12,chr12	+,-,+,+,+,+	PEX5,RBP5,PEX5,PEX5,PEX5,PEX5	-6,-61401,-1159,-636,-636,-636
chr20:44641207-44641971	chr20	+	44641375	44641933	True	NM_004994,NM_001134771,NM_022095	chr20,chr20,chr20	+,+,-	MMP9,SLC12A5,ZNF335	-3879,8395,-40542
chr3:125561263-125563008	chr3	+	125561609	125563019	True	NR_024250,NR_031687	chr3,chr3	+,-	LOC100125556,MIR548I1	72424,-52214
chr11:22363096-22363984	chr11	+	22363239	22364021	True	NM_020346,NM_022725	chr11,chr11	+,-	SLC17A6,FANCF	-3623,283416
chr4:8177294-8178862	chr4	+	8177428	8178842	True	NM_001130088,NM_018986	chr4,chr4	-,+	ABLIM2,SH3TC1	-16869,22217
chr1:21878511-21878826	chr1	+	21878510	21878581	True	NM_001177520,NM_001145658	chr1,chr1	+,-	ALPL,RAP1GAP	-42703,99820
chr15:77285223-77285526	chr15	+	77285245	77285567	True	NM_003978,NM_001168412	chr15,chr15	+,-	PSTPIP1,TSPAN3	1897,78053
chr16:57392095-57392616	chr16	+	57392129	57392587	True	NM_015993,NM_002990	chr16,chr16	-,+	PLLP,CCL22	-73545,107
chr10:70164787-70166271	chr10	+	70165271	70166230	True	NM_001042417,NM_021644,NM_017987	chr10,chr10,chr10	-,+,-	RUFY2,HNRNPH3,RUFY2	872,-73555,767
chr12:112847831-112848180	chr12	+	112848058	112848202	True	NM_002834,NM_000970,NM_001024662	chr12,chr12,chr12	+,-,-	PTPN11,RPL6,RPL6	8333,-615,-615
chr10:28574339-28574994	chr10	+	28574406	28574979	True	NR_024557,NM_173496	chr10,chr10	+,-	WAC,MPP7	246447,-3339
chr16:67022113-67022959	chr16	+	67022153	67022919	True	NM_173815,NR_024525	chr16,chr16	+,-	CES4A,FAM96B	8,-53833
chr6:39290538-39291736	chr6	+	39290639	39291650	True	NM_001135105,NM_032115,NM_001135107,NM_001135106,NM_001135111,NM_031460,NM_002062	chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,-,-,-,+	KCNK16,KCNK16,KCNK16,KCNK16,KCNK17,KCNK17,GLP1R	-309,-309,-309,-309,-8402,-8403,-274133
chr4:16904467-16904751	chr4	+	16904496	16904780	True	NM_001130834,NM_001079827,NM_001290	chr4,chr4,chr4	-,+,-	LDB2,CLRN2,LDB2	-4072,612007,-4072
chr15:80203908-80204996	chr15	+	80204269	80204815	True	NR_028330,NM_001100879	chr15,chr15	+,-	C15orf37,ST20	10297,2843
chr13:113778483-113778765	chr13	+	113778494	113778756	True	NM_000504,NM_001127202	chr13,chr13	+,-	F10,PCID2	-1432,84323
chr3:122785556-122785834	chr3	+	122785560	122785746	True	NR_028444,NM_006810,NM_001031702	chr3,chr3,chr3	+,+,-	PDIA5,PDIA5,SEMA5B	109,109,-38984
chr12:122035171-122036013	chr12	+	122035468	122035537	True	NM_032590,NM_032790	chr12,chr12	-,+	KDM2B,ORAI1	-16548,28917
chr3:196365632-196366189	chr3	+	196365688	196366204	True	NM_198565,NM_182627	chr3,chr3	+,-	LRRC33,WDR53	451,-70275
chr17:44337080-44337439	chr17_ctg5_hap1	-	528522	528670	False	NM_001193465,NR_034172	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	KIAA1267,LOC644246	34827,66766
chr17:44337080-44337439	chr17_ctg5_hap1	+	1423909	1423959	False	NR_002940,NM_016632	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LRRC37A4,ARL17A	57417,89975
chr17:44337080-44337439	chr17_ctg5_hap1	+	1204260	1204408	False	NR_026901,NR_037772	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LOC644172,CRHR1	-15872,-33807
chr17:44337080-44337439	chr17	+	44337271	44337443	True	NM_001193465,NM_014834	chr17,chr17	-,+	KIAA1267,LRRC37A	-34531,35053
chr17:44337080-44337439	chr17	-	43663765	43663931	False	NR_026901,NR_037772	chr17,chr17	-,+	LOC644172,CRHR1	15867,33778
chr2:128295626-128296300	chr2	+	128295756	128296129	True	NM_017969,NM_001080527	chr2,chr2	-,+	IWS1,MYO7B	-11669,-2429
chr8:145061913-145063194	chr8	+	145062978	145063172	True	NM_000837,NM_032789,NM_001009184	chr8,chr8,chr8	+,-,+	GRINA,PARP10,GRINA	1053,-2343,1053
chr19:47842867-47843885	chr19	+	47843024	47843934	True	NM_001009813,NM_014681,NM_018485	chr19,chr19,chr19	-,+,+	MEIS3,DHX34,GPR77	78901,8603,-2706
chr2:11805276-11806546	chr2	+	11805496	11806082	True	NM_012344,NM_145693	chr2,chr2	-,+	NTSR2,LPIN1	4297,80657
chr22:43044734-43045037	chr22	+	43044738	43044910	True	NM_001171660,NM_001171661,NM_001129819,NM_000398,NM_007326,NR_029422,NM_001165877	chr22,chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,-,+,-	CYB5R3,CYB5R3,CYB5R3,CYB5R3,CYB5R3,RNU12,ATP5L2	-4098,-1743,-1743,545,-1743,-33538,-8131
chr3:160284621-160286307	chr3	+	160284699	160286101	True	NM_002268,NM_025047	chr3,chr3	-,+	KPNA4,ARL14	-1323,108846
chr4:26486299-26486533	chr4	+	26486303	26486395	True	NM_000730,NM_018317	chr4,chr4	-,+	CCKAR,TBC1D19	5699,99150
chr14:74180723-74181107	chr14	+	74180744	74181092	True	NM_031427,NM_006029	chr14,chr14	+,-	DNAL1,PNMA1	-69217,86
chr18:14475327-14477312	chr18	+	14475640	14477031	True	NR_024076,NR_026756	chr18,chr18	-,+	CXADRP3,LOC284233	21724,-138269
chr16:31580341-31580652	chr16	+	31580358	31580570	True	NR_027011,NM_016633	chr16,chr16	-,+	CSDAP1,AHSP	325,-41206
chr9:35971309-35971757	chr9	+	35971360	35971806	True	NR_024283,NM_019897	chr9,chr9	+,-	LOC158376,OR2S2	-61931,-13209
chr13:37514889-37516677	chr13	+	37514928	37516501	True	NM_005905,NM_181503	chr13,chr13	-,+	SMAD9,EXOSC8	-20519,58176
chr3:48699871-48700104	chr3	+	48699873	48699933	True	NM_033629,NM_001407	chr3,chr3	+,-	TREX1,CELSR3	-192695,465
chr12:15113091-15113648	chr12	+	15113139	15113428	True	NM_001175,NM_006205	chr12,chr12	-,+	ARHGDIB,PDE6H	1189,12527
chr17:18855207-18855552	chr17	+	18855386	18855600	True	NM_001042450,NM_001039999,NM_152351	chr17,chr17,chr17	+,-,+	SLC5A10,FAM83G,SLC5A10	7,52510,7
chr11:67054942-67055930	chr11	+	67054970	67055970	True	NM_021173,NR_030767,NM_207354	chr11,chr11,chr11	-,+,+	POLD4,ANKRD13D,ANKRD13D	65132,845,791
chr8:54164811-54165045	chr8	+	54164845	54165033	True	NM_000912,NM_005285	chr8,chr8	-,+	OPRK1,NPBWR1	-651,-312428
chr6:10520359-10521816	chr6	+	10520780	10521792	True	NM_145649,NR_027793	chr6,chr6	+,-	GCNT2,C6orf218	-30,-85725
chr2:210296693-210298051	chr2	+	210296746	210298021	True	NM_152519,NM_001039538	chr2,chr2	-,+	C2orf67,MAP2	738081,-8028
chr15:74903828-74904473	chr15	+	74904210	74904354	True	NM_001130028,NM_003992,NM_001142443	chr15,chr15,chr15	+,+,-	CLK3,CLK3,EDC3	2980,-3548,84082
chr6:152640090-152641153	chr6	+	152640248	152640673	True	NM_025107,NM_015293	chr6,chr6	+,-	MYCT1,SYNE1	378356,-769
chrX:110498750-110499549	chrX	+	110498756	110499234	True	NM_001128173,NM_014289	chrX,chrX	+,-	PAK3,CAPN6	-132516,14596
chr19:38040304-38041429	chr19	+	38040320	38041408	True	NM_016536,NM_152606	chr19,chr19	-,+	ZNF571,ZNF540	44315,899
chr1:101701294-101701525	chr1	+	101701299	101701511	True	NM_001400,NM_015958	chr1,chr1	+,-	S1PR1,DPH5	793,-209937
chr6:28228053-28228757	chr6	+	28228083	28228470	True	NM_001111039,NM_001007531,NM_001023560,NM_019110,NM_152736	chr6,chr6,chr6,chr6,chr6	+,+,+,-,+	ZNF187,NKAPL,ZNF187,ZKSCAN4,ZNF187	6317,-1036,6317,-8081,6317
chr8:33330025-33330247	chr8	+	33330046	33330135	True	NM_032509,NM_032664	chr8,chr8	+,-	MAK16,FUT10	12549,580
chr9:120174322-120174825	chr9	+	120174331	120174805	True	NM_138554,NM_014010	chr9,chr9	+,-	TLR4,ASTN2	291654,2562
chr22:26136707-26137324	chr22	+	26136750	26136995	True	NM_001135772,NM_032608	chr22,chr22	-,+	LRP5L,MYO18B	-359206,1124
chr11:3530159-3530643	chr11	+	3530536	3530684	True	NM_007152,NR_002720	chr11,chr11	-,+	ZNF195,TRPC2	-130088,117029
chr4:70722372-70723812	chr4	+	70722882	70723489	True	NM_005420,NM_001025104	chr4,chr4	-,+	SULT1E1,CSN1S1	2432,73309
chr2:232651938-232652566	chr2	+	232651939	232652606	True	NM_022730,NM_002601	chr2,chr2	+,-	COPS7B,PDE6D	-829,-5965
chr6:97441759-97442262	chr6	+	97441758	97442184	True	NM_014165,NM_052904	chr6,chr6	-,+	NDUFAF4,KLHL32	-95991,-69315
chr16:70720256-70720514	chr16	+	70720406	70720500	True	NM_001172772,NM_138383	chr16,chr16	+,-	IL34,MTSS1L	-62562,-452
chr14:98670092-98671276	chr14	+	98670185	98671197	True	NR_015430,NM_182560	chr14,chr14	-,+	C14orf64,C14orf177	-225724,506752
chr6:41605100-41605335	chr6	+	41605104	41605236	True	NM_005586,NM_007162	chr6,chr6	+,-	MDFI,TFEB	958,97612
chr14:50779653-50779870	chr14	+	50779652	50779917	True	NR_033761,NM_024884,NM_001003805,NM_001003803,NM_015684	chr14,chr14,chr14,chr14,chr14	+,-,+,+,+	ATP5S,L2HGDH,ATP5S,ATP5S,ATP5S	-656,-705,-656,-656,-656
chr1:23672555-23672847	chr1	+	23672705	23672777	True	NR_033690,NM_001102398,NM_001102399,NM_005826,NM_001102397	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	C1orf213,HNRNPR,HNRNPR,HNRNPR,HNRNPR	22686,-1852,-1852,-1852,-1852
chr1:3569567-3569829	chr1	+	3569726	3569868	True	NM_001204188,NM_001204184,NM_005427,NM_001204186,NM_001204187,NM_001204185,NM_017818	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,+,-	TP73,TP73,TP73,TP73,TP73,TP73,WDR8	-648,-648,-648,-648,-648,-648,-3055
chr1:226599573-226601489	chr1	+	226599613	226601505	True	NM_001618,NM_001003665	chr1,chr1	-,+	PARP1,C1orf95	-3812,134995
chr1:159829761-159831258	chr1	+	159829935	159831211	True	NM_020125,NM_001013661,NM_001134233	chr1,chr1,chr1	+,-,-	SLAMF8,VSIG8,C1orf204	-33507,1286,-4798
chr12:52710741-52711587	chr12	+	52710834	52711317	True	NM_002284,NM_002282	chr12,chr12	+,-	KRT86,KRT83	-15236,3916
chr19:45753753-45754315	chr19	+	45753835	45754294	True	NM_031417,NM_001199867,NM_138568	chr19,chr19,chr19	+,+,-	MARK4,MARK4,EXOC3L2	221,221,-16366
chr12:58133592-58133861	chr12	+	58133598	58133800	True	NM_001122772,NM_005981,NM_014770	chr12,chr12,chr12	-,+,-	AGAP2,TSPAN31,AGAP2	-1569,4983,2190
chr8:126104558-126105020	chr8	+	126104560	126105030	True	NM_014846,NM_173685	chr8,chr8	-,+	KIAA0196,NSMCE2	-499,-528
chrY:14400255-14401167	chrY	+	14400629	14401193	True	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	373104,132246
chr3:195810828-195811184	chr3	+	195810917	195811007	True	NM_003234,NR_034088,NM_001128148	chr3,chr3,chr3	-,+,-	TFRC,LOC401109,TFRC	-1956,58499,-1885
chr22:32650127-32650511	chr22	+	32650141	32650513	True	NM_014227,NM_006604	chr22,chr22	-,+	SLC5A4,RFPL3	855,100358
chr19:57829151-57830328	chr19	+	57829223	57830016	True	NM_020633,NM_213598	chr19,chr19	-,+	VN1R1,ZNF543	138141,1848
chr19:41105124-41105571	chr19	+	41105124	41105476	True	NM_001042544,NM_001042545,NM_004756,NM_003573	chr19,chr19,chr19,chr19	+,+,-,+	LTBP4,LTBP4,NUMBL,LTBP4	-2034,1800,91130,-6103
chr8:145081935-145082185	chr8	+	145082069	145082165	True	NM_032789,NM_001134374,NM_198572	chr8,chr8,chr8	-,+,+	PARP10,SPATC1,SPATC1	-21434,4416,4416
chr3:121921070-121921806	chr3	+	121921713	121921831	True	NM_001017928,NM_001178065	chr3,chr3	-,+	CCDC58,CASR	180293,-18587
chr12:10742689-10742907	chr12	+	10742788	10742945	True	NM_007334,NR_028045	chr12,chr12	+,-	KLRD1,KLRAP1	-282436,9546
chr6:108615428-108615973	chr6	+	108615451	108615943	True	NM_145315,NM_152827	chr6,chr6	+,-	LACE1,SNX3	154,-32987
chr3:14444061-14444276	chr3	+	14444114	14444188	True	NM_001134367,NM_001080423,NM_001134368,NM_003043	chr3,chr3,chr3,chr3	+,-,+,+	SLC6A6,GRIP2,SLC6A6,SLC6A6	-59,139450,-59,-59
chr8:120431157-120431485	chr8	+	120431241	120431527	True	NM_002514,NM_001040092	chr8,chr8	+,-	NOV,ENPP2	-2740,219629
chr16:2098403-2099681	chr16	+	2098409	2099461	True	NM_000548,NM_001077183,NM_001114382,NM_002528	chr16,chr16,chr16,chr16	+,+,+,-	TSC2,TSC2,TSC2,NTHL1	-470,-470,-470,-542
chr1:24306763-24307214	chr1	+	24306827	24307243	True	NM_006625,NR_034035,NM_054016,NM_017761,NM_001191009,NM_001191006,NM_001191007,NM_001191005	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,-,-,-	SRSF10,SRSF10,SRSF10,PNRC2,SRSF10,SRSF10,SRSF10,SRSF10	-24,-24,-24,-20577,-24,-24,-24,-24
chr16:67927677-67927972	chr16	+	67927716	67928012	True	NM_006742,NM_001907,NM_198443	chr16,chr16,chr16	+,-,+	PSKH1,CTRL,NRN1L	-592,37816,-8986
chr18:30350540-30350741	chr18	+	30350540	30350746	True	NR_003558,NM_020805	chr18,chr18	+,-	WBP11P1,KLHL14	-258965,2278
chr19:10448799-10449339	chr19	+	10449112	10449388	True	NM_002162,NM_133452,NM_003259	chr19,chr19,chr19	-,-,+	ICAM3,RAVER1,ICAM5	1007,-4798,-48515
chr5:180019345-180020442	chr5	+	180019373	180020488	True	NM_052863,NM_015455	chr5,chr5	-,+	SCGB3A1,CNOT6	-886,-98007
chr16:71396156-71398083	chr16	+	71396164	71397791	True	NM_007088,NR_027910,NM_018348,NM_001740	chr16,chr16,chr16,chr16	+,+,-,+	CALB2,CALB2,FTSJD1,CALB2	-3600,-3600,-72655,-3600
chr11:73888568-73890130	chr11	+	73888567	73890168	True	NM_015531,NM_016147	chr11,chr11	-,+	C2CD3,PPME1	-6503,-6254
chr1:40137985-40138255	chr1	+	40138044	40138303	True	NM_203456,NM_032526	chr1,chr1	+,-	PPIE,NT5C1A	66213,-334
chr12:57916882-57917832	chr12	+	57917191	57917739	True	NM_004083,NM_052897,NM_001195053,NM_001195055,NM_001195054,NM_001195057,NM_001195056	chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,+,-,-,-,-,-	DDIT3,MBD6,DDIT3,DDIT3,DDIT3,DDIT3,DDIT3	-2891,-583,-2891,-2891,-2891,-2891,-2891
chr3:141057256-141058684	chr3	+	141057820	141058732	True	NM_001178140,NM_001080412	chr3,chr3	-,+	TFDP2,ZBTB38	660553,-14821
chr14:100150960-100151677	chr14	+	100151009	100151516	True	NM_001144995,NM_006668	chr14,chr14	-,+	CCDC85C,CYP46A1	-80282,-305
chr16:14402635-14403369	chr16	+	14402681	14403391	True	NR_029854,NM_001134477,NR_030177	chr16,chr16,chr16	+,-,+	MIR365-1,PARN,MIR193B	86,320781,-4908
chr16:78053951-78054675	chr16	+	78054214	78054696	True	NM_005752,NM_199355	chr16,chr16	+,-	CLEC3A,ADAMTS18	1746,-585203
chr3:191299731-191300441	chr3	+	191299960	191300483	True	NM_001083308,NM_198152	chr3,chr3	+,-	PYDC2,UTS2D	-121059,-251635
chr1:26196630-26198496	chr1	+	26196955	26198309	True	NM_178422,NM_001099626	chr1,chr1	-,+	PAQR7,FAM54B	101,-49687
chr15:101073280-101073853	chr15	+	101073317	101073689	True	NM_024708,NM_178842	chr15,chr15	+,-	ASB7,LASS3	69065,11290
chr5:57751528-57752906	chr5	+	57751657	57752916	True	NM_006622,NM_152687	chr5,chr5	-,+	PLK2,GAPT	3047,34413
chr16:68013131-68014108	chr16	+	68013329	68014027	True	NM_022357,NM_001129758,NM_017803	chr16,chr16,chr16	-,-,+	DPEP3,DPEP3,DUS2L	475,475,43176
chr19:911165-911731	chr19	+	911467	911665	True	NM_138774,NM_032551	chr19,chr19	-,+	C19orf22,KISS1R	1610,5676
chr18:12703569-12705356	chr18	+	12703618	12704859	True	NM_020232,NM_024899	chr18,chr18	+,-	PSMG2,CEP76	-690,-915
chr5:155761977-155763144	chr5	+	155762082	155762984	True	NM_001128209,NM_001146726,NM_000337,NM_172244	chr5,chr5,chr5,chr5	+,-,+,+	SGCD,TIMD4,SGCD,SGCD	-8380,627332,-8380,-8380
chr12:120045504-120047212	chr12	+	120045722	120046715	True	NR_031589,NM_001136534	chr12,chr12	-,+	MIR1178,TMEM233	104864,-14522
chr16:87524358-87524610	chr16	+	87524357	87524637	True	NM_022818,NM_015144	chr16,chr16	+,-	MAP1LC3B,ZCCHC14	-98607,873
chr7:107645185-107646129	chr7	+	107645199	107645949	True	NM_002291,NM_000108	chr7,chr7	-,+	LAMB1,DLD	-1395,-113664
chr1:212008645-212009458	chr1	+	212008871	212009062	True	NM_016448,NM_014873	chr1,chr1	+,-	DTL,LPGAT1	199856,-4757
chr2:233872235-233873800	chr2	+	233872378	233873444	True	NM_005383,NM_019850	chr2,chr2	+,-	NEU2,NGEF	23937,4566
chr16:18817360-18819240	chr16	+	18817417	18819038	True	NM_015161,NM_024847	chr16,chr16	-,+	ARL6IP1,TMC7	-4560,176217
chr5:121187005-121187480	chr5	+	121187159	121187390	True	NM_001178102,NM_177478	chr5,chr5	-,+	LOX,FTMT	225579,259
chr1:20816762-20817886	chr1	+	20816853	20817563	True	NM_207334,NM_018584	chr1,chr1	+,-	FAM43B,CAMK2N1	61368,-4125
chr17:1360721-1361127	chr17	+	1360869	1361129	True	NM_005206,NM_016823,NR_028514	chr17,chr17,chr17	-,-,+	CRK,CRK,LOC100306951	-1325,-1325,59083
chr16:83935192-83936861	chr16	+	83935265	83936747	True	NM_001080442,NM_012213	chr16,chr16	-,+	SLC38A8,MLYCD	139065,-2586
chr8:144677927-144678289	chr8	+	144678083	144678273	True	NM_001130053,NM_032378,NM_001130055,NM_001130056,NM_001130057,NM_032862,NM_001960,NM_001195203	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,-,+,-,-	EEF1D,EEF1D,EEF1D,EEF1D,EEF1D,TIGD5,EEF1D,EEF1D	1622,1622,1622,1622,1335,1800,1622,1622
chr3:52812375-52813020	chr3	+	52812381	52813039	True	NM_003157,NM_001166436,NM_001166435,NM_001166434,NM_001193533,NM_002215	chr3,chr3,chr3,chr3,chr3,chr3	-,+,+,+,-,+	NEK4,ITIH1,ITIH1,ITIH1,NEK4,ITIH1	-7416,897,897,91,-7416,-824
chr22:29283871-29284825	chr22	+	29284045	29284814	True	NM_005080,NM_032173	chr22,chr22	-,+	XBP1,ZNRF3	-87485,-4206
chr2:87757355-87758027	chr2	+	87757456	87758030	True	NM_001078170,NR_024206,NR_024204,NR_024205	chr2,chr2,chr2,chr2	-,+,+,+	RGPD2,NCRNA00152,NCRNA00152,NCRNA00152	367306,-2533,-2533,-2533
chr2:87757355-87758027	chr2	-	112249755	112250155	False	NR_024373,NM_207003,NR_015395	chr2,chr2,chr2	-,+,-	LOC541471,BCL2L11,LOC541471	2587,-371315,2587
chr21:37431840-37432202	chr21	+	37432056	37432144	True	NM_017438,NM_001007259,NM_001757	chr21,chr21,chr21	-,-,+	SETD4,SETD4,CBR1	722,517,10140
chrX:13679255-13680243	chrX	+	13679387	13680255	True	NM_001011658,NM_152634	chrX,chrX	-,+	TRAPPC2,TCEANC	72556,-8137
chr12:122239073-122239348	chr12	+	122239085	122239385	True	NM_015048,NM_019034,NR_002809	chr12,chr12,chr12	+,-,-	SETD1B,RHOF,LOC338799	3252,-7491,2055
chr10:63985834-63986642	chr10	+	63986145	63986438	True	NM_014951,NM_145307	chr10,chr10	+,-	ZNF365,RTKN2	147477,42079
chr11:75273888-75274334	chr11	+	75273934	75274194	True	NM_030792,NM_001235	chr11,chr11	-,+	GDPD5,SERPINH1	-37335,-815
chr2:224469683-224471016	chr2	+	224469754	224470986	True	NM_022915,NM_003469	chr2,chr2	+,-	MRPL44,SCG2	351134,-2537
chr17:36515953-36516170	chr17	+	36515956	36516081	True	NM_001004334,NM_014598	chr17,chr17	-,+	GPR179,SOCS7	-16263,-8004
chr16:1031246-1031486	chr16	+	1031406	1031496	True	NR_033645,NM_014587,NR_036442	chr16,chr16,chr16	-,+,-	LMF1,SOX8,LMF1	-88,311,-88
chr17:42092920-42093699	chr17	+	42093054	42093473	True	NM_032376,NM_153006	chr17,chr17	-,+	TMEM101,NAGS	-709,-11073
chr7:99473780-99475615	chr7	+	99473793	99475497	True	NM_001005276,NM_057096	chr7,chr7	-,+	OR2AE1,CYP3A43	261,-48216
chr19:16832455-16833691	chr19	+	16832568	16833689	True	NM_001007525,NM_024104	chr19,chr19	+,-	NWD1,C19orf42	-1833,-61600
chr10:76998142-76998396	chr10	+	76998181	76998333	True	NM_144589,NR_033675	chr10,chr10	-,+	COMTD1,VDAC2	-2411,-27932
chr8:133880919-133881915	chr8	+	133881040	133881885	True	NM_003235,NM_144649	chr8,chr8	+,-	TG,TMEM71	-1893,-108126
chr15:41246085-41246336	chr15	+	41246145	41246373	True	NM_024111,NM_133639,NM_001142776	chr15,chr15,chr15	+,-,+	CHAC1,RHOV,CHAC1	-560,-79658,-560
chr5:138739594-138740001	chr5	+	138739645	138739997	True	NM_001033112,NM_194296,NM_001161546	chr5,chr5,chr5	+,-,-	PAIP2,SPATA24,LOC389333	-61562,113,-8760
chr12:29499765-29500310	chr12	+	29499870	29500298	True	NM_018099,NM_016570	chr12,chr12	+,-	FAR2,ERGIC2	-123328,33895
chr7:92145455-92146079	chr7	+	92145763	92146091	True	NM_000466,NM_032120	chr7,chr7	-,+	PEX1,C7orf64	11804,11995
chr18:9924675-9925092	chr18	+	9924674	9925132	True	NM_194434,NM_005134	chr18,chr18	+,-	VAPA,PPP4R1	-10772,-310074
chr5:35990116-35990880	chr5	+	35990289	35990761	True	NM_002185,NM_152404	chr5,chr5	+,-	IL7R,UGT3A1	-133349,824
chr17:4690990-4691559	chr17	+	4691334	4691522	True	NM_002798,NM_001014985,NM_001144939,NM_001144941,NM_001144940,NM_182566	chr17,chr17,chr17,chr17,chr17,chr17	+,+,-,-,-,-	PSMB6,GLTPD2,VMO1,VMO1,VMO1,VMO1	7934,731,-1605,-1605,-1605,-1605
chr17:30771005-30771240	chr17	+	30771069	30771197	True	NM_002815,NM_022344	chr17,chr17	+,-	PSMD11,C17orf75	304,-101880
chrX:137794007-137794275	chrX	+	137794064	137794322	True	NM_004114,NR_028597	chrX,chrX	-,+	FGF13,SRD5A1P1	-237,734655
chr19:9645684-9647093	chr19	+	9645792	9647102	True	NM_024106,NM_001172651	chr19,chr19	-,+	ZNF426,ZNF177	2251,-158858
chr2:27356605-27356869	chr2	+	27356715	27356855	True	NM_032604,NM_178553,NM_013388	chr2,chr2,chr2	+,-,-	ABHD1,C2orf53,PREB	-10109,5527,737
chr7:129995472-129996093	chr7	+	129995540	129996034	True	NM_080385,NM_018718	chr7,chr7	+,-	CPA5,TSGA14	-10974,84870
chr8:143485048-143485268	chr8	+	143485048	143485314	True	NM_145003,NM_001702	chr8,chr8	-,+	TSNARE1,BAI1	-505,60062
chr16:15736905-15737121	chr16	+	15736936	15737022	True	NM_001143979,NM_001184998,NM_014647,NR_030159,NM_001184999,NM_017668	chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,+,-,+	NDE1,KIAA0430,KIAA0430,MIR484,KIAA0430,NDE1	101,51,51,128,51,7060
chr2:162016641-162016926	chr2	+	162016666	162016964	True	NM_016836,NM_001199135	chr2,chr2	-,+	RBMS1,TANK	-666348,20
chr1:17381630-17382460	chr1	+	17381768	17382462	True	NM_014675,NM_003000	chr1,chr1	+,-	CROCC,SDHB	-133381,-1103
chr20:33736175-33736398	chr20	+	33736188	33736248	True	NM_018217,NM_006404,NR_026728,NM_001145025	chr20,chr20,chr20,chr20	-,+,-,-	EDEM2,PROCR,EDEM2,EDEM2	-1027,23525,-1027,-1027
chr8:37732237-37733130	chr8	+	37732457	37733160	True	NM_001002814,NM_032777	chr8,chr8	-,+	RAB11FIP1,GPR124	23905,-78107
chr14:67879723-67880111	chr14	+	67879857	67880159	True	NM_016445,NM_004094	chr14,chr14	-,+	PLEK2,EIF2S1	-1029,-52885
chr5:125690190-125691813	chr5	+	125690398	125691674	True	NM_001146319,NM_001182	chr5,chr5	+,-	GRAMD3,ALDH7A1	4113,239458
chr4:1285531-1285908	chr4	+	1285549	1285853	True	NM_001328,NM_001017405,NM_005882	chr4,chr4,chr4	-,+,+	CTBP1,MAEA,MAEA	-42641,-1941,-1941
chr15:49462673-49463438	chr15	+	49462729	49463216	True	NM_004236,NM_002044	chr15,chr15	-,+	COPS2,GALK2	-14875,-363
chr6:88302269-88302531	chr6	+	88302386	88302480	True	NM_020320,NM_181837,NM_012381,NM_001197259	chr6,chr6,chr6,chr6	-,+,+,+	RARS2,ORC3,ORC3,ORC3	-2651,-2660,-2660,-2660
chr7:105031945-105033418	chr7	+	105031954	105032997	True	NM_182692,NM_021930	chr7,chr7	-,+	SRPK2,RINT1	-2613,139534
chr3:12199658-12199913	chr3	+	12199808	12199954	True	NM_003256,NM_005037	chr3,chr3	-,+	TIMP4,PPARG	947,129394
chr17:71817203-71818792	chr17	+	71817206	71818813	True	NM_000999,NR_027146	chr17,chr17	+,-	RPL38,C17orf54	380981,5916
chrX:153171434-153171646	chrX	+	153171562	153171686	True	NM_001164741,NM_001146151,NM_000054,NR_027419	chrX,chrX,chrX,chrX	-,+,+,+	ARHGAP4,AVPR2,AVPR2,AVPR2	20078,-1084,-1084,-3628
chr15:63893741-63894194	chr15	+	63893872	63894143	True	NR_034080,NM_203373	chr15,chr15	-,+	LOC100130855,FBXL22	-846,-4371
chr11:75141724-75142077	chr11	+	75141878	75142040	True	NR_000025,NM_001039548	chr11,chr11	+,-	SNORD15B,KLHL35	-26466,-204
chr2:70119094-70121008	chr2	+	70119473	70121045	True	NM_006857,NR_037862,NM_152792	chr2,chr2,chr2	+,+,-	SNRNP27,SNRNP27,ASPRV1	29,29,68402
chr7:73442342-73442548	chr7	+	73442421	73442501	True	NM_001081754,NM_000501,NM_001081752,NM_001081753,NM_152559,NM_001081755	chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,-,+	ELN,ELN,ELN,ELN,WBSCR27,ELN	-45,-45,-45,-45,-185566,-45
chrX:107331007-107331287	chrX	+	107331006	107331322	True	NM_052936,NM_178270,NM_002814,NM_170750	chrX,chrX,chrX,chrX	+,+,-,-	ATG4A,ATG4A,PSMD10,PSMD10	3576,3576,3602,3602
chr17:44074356-44075934	chr17_ctg5_hap1	-	791782	793098	False	NM_001007532,NR_024559	chr17_ctg5_hap1,chr17_ctg5_hap1	-,+	STH,LOC100128977	-649,101595
chr17:44074356-44075934	chr17	+	44074414	44075966	True	NM_001007532,NR_024559	chr17,chr17	+,-	STH,LOC100128977	649,-101535
chr1:46661728-46662468	chr1	+	46661814	46662472	True	NM_001013615,NM_017739	chr1,chr1	+,-	C1orf190,POMGNT1	6533,1699
chr2:242210423-242211129	chr2	+	242210433	242211126	True	NM_203346,NM_001008491	chr2,chr2	-,+	HDLBP,SEPT2	1225,43596
chr1:223740729-223741029	chr9	+	138940327	138940451	False	NM_015597,NM_144653	chr9,chr9	+,-	GPSM1,NACC2	281480,46730
chr1:223740729-223741029	chr1	+	223740750	223740946	True	NM_001146068,NM_001143962	chr1,chr1	+,-	CAPN2,CAPN8	148348,112540
chr9:32994010-32995740	chr9	+	32994091	32995611	True	NM_001195254,NR_036577,NM_001195252,NM_001195251,NM_001195250,NR_036579,NR_036578,NM_001195248,NM_001195249,NM_175069,NM_001539,NM_175073,NR_036576	chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,-,-,-,-,-,-,-,-,-,+,-,-	APTX,APTX,APTX,APTX,APTX,APTX,APTX,APTX,APTX,APTX,DNAJA1,APTX,APTX	6049,6078,6078,6078,6078,6013,6049,6078,6013,6078,29597,6078,6078
chr12:131317489-131319017	chr12	+	131317524	131319061	True	NM_194356,NM_001980,NM_006325	chr12,chr12,chr12	-,-,+	STX2,STX2,RAN	4800,4800,37555
chr11:46262552-46263303	chr11	+	46262639	46263109	True	NM_016621,NM_052854	chr11,chr11	-,+	PHF21A,CREB3L1	-119654,36118
chr15:84118655-84119229	chr15	+	84118778	84119247	True	NM_003027,NM_001717,NR_026799	chr15,chr15,chr15	+,-,+	SH3GL3,BNC1,SH3GL3	-2738,-165310,-2738
chr12:53660297-53660628	chr12	+	53660398	53660503	True	NM_012291,NM_000966	chr12,chr12	+,-	ESPL1,RARG	1579,-34362
chr5:180417607-180417963	chr5	+	180417621	180418009	True	NM_197975,NM_152283	chr5,chr5	+,-	BTNL3,ZFP62	-1828,-129335
chr3:196440895-196441491	chr3	+	196440894	196441066	True	NM_017861,NM_032898,NM_001166304	chr3,chr3,chr3	+,-,+	PIGX,C3orf34,PIGX	-1701,-1771,-1701
chr15:45405165-45405378	chr15	+	45405175	45405425	True	NM_207581,NM_014080	chr15,chr15	+,-	DUOXA2,DUOX2	1097,984
chr22:34985350-34985598	chr22	+	34985423	34985595	True	NM_001008494,NM_133642	chr22,chr22	+,-	ISX,LARGE	476534,-669007
chr16:29873597-29874030	chr16	+	29873898	29874058	True	NM_006319,NR_024370,NR_015396	chr16,chr16,chr16	-,+,+	CDIPT,LOC440356,LOC440356	570,945,1096
chr2:52799095-52799448	chr2	+	52799226	52799406	True	NM_001201965,NM_001008708	chr2,chr2	-,+	ASB3,CHAC2	1214629,1195522
chr7:16625149-16625358	chr7	+	16625153	16625319	True	NM_001195280,NM_020319	chr7,chr7	+,-	LOC100506049,ANKMY2	-58699,60173
chr7:23339448-23339873	chr7	+	23339596	23339785	True	NM_138446,NM_006547	chr7,chr7	+,-	C7orf30,IGF2BP3	-707,170261
chr11:19213174-19213843	chr11	+	19213180	19213856	True	NM_001127656,NM_003476,NM_019028	chr11,chr11,chr11	-,-,+	CSRP3,CSRP3,ZDHHC13	9724,9783,-74539
chr11:117049971-117050881	chr11	+	117050051	117050813	True	NM_001040455,NM_004716	chr11,chr11	+,-	SIDT2,PCSK7	-163,52048
chr17:5321999-5322636	chr17	+	5321998	5322593	True	NR_027685,NM_001160243,NM_001160244,NR_027681,NM_001160246,NR_027680,NM_001033002,NM_002532,NR_027682,NR_027684,NR_027683,NM_001160266,NM_001160267,NR_027678,NR_027679	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,+,+,-,+,+,+,+,+,+,+	RPAIN,RPAIN,RPAIN,RPAIN,RPAIN,RPAIN,RPAIN,NUP88,RPAIN,RPAIN,RPAIN,RPAIN,RPAIN,RPAIN,RPAIN	367,367,367,367,367,367,367,516,367,367,367,367,367,367,367
chr3:118958027-118958761	chr3	+	118958198	118958803	True	NM_212543,NM_003778,NM_020754	chr3,chr3,chr3	-,-,+	B4GALT4,B4GALT4,ARHGAP31	1002,1002,54416
chr3:10546828-10547137	chr3	+	10546906	10547186	True	NM_001683,NR_024146,NM_001001331	chr3,chr3,chr3	-,+,-	ATP2B2,GHRLOS,ATP2B2	132,-219519,132
chr15:64342728-64343068	chr15	+	64342885	64343093	True	NM_003099,NM_014326	chr15,chr15	+,-	SNX1,DAPK2	45083,-4364
chr7:65959944-65961447	chr7	+	65960209	65961105	True	NM_001167961,NR_002933	chr7,chr7	+,-	KCTD7,LOC493754	132762,82443
chr9:113437660-113438693	chr9	+	113437789	113438557	True	NM_153366,NM_005592,NM_001166280,NM_001166281	chr9,chr9,chr9,chr9	-,+,+,+	SVEP1,MUSK,MUSK,MUSK	-95629,-6789,-6789,-6789
chr19:44956217-44958038	chr19	+	44956288	44957763	True	NM_001205280,NM_014518	chr19,chr19	+,-	LOC147710,ZNF229	159176,-3623
chr1:241505296-241506484	chr1	+	241505467	241506045	True	NM_002924,NM_003679	chr1,chr1	-,+	RGS7,KMO	14491,189634
chr1:203202983-203203699	chr1	+	203203021	203203618	True	NM_003465,NM_006763	chr1,chr1	-,+	CHIT1,BTG2	-4161,71045
chr12:82755731-82756328	chr12	+	82755760	82756280	True	NM_032230,NM_014167,NR_033192	chr12,chr12,chr12	+,-,-	C12orf26,CCDC59,CCDC59	-3546,-3561,-3176
chr2:42077190-42078052	chr2	+	42077353	42077971	True	NR_033996,NM_004718	chr2,chr2	+,-	LOC388942,COX7A2L	26723,510435
chr1:1979986-1980251	chr1	+	1980188	1980250	True	NM_002744,NM_001080484	chr1,chr1	+,-	PRKCZ,KIAA1751	1658,-44912
chr11:57276782-57277649	chr11	+	57277242	57277556	True	NM_003627,NM_001198810,NM_001105565	chr11,chr11,chr11	-,-,+	SLC43A1,SLC43A1,SMTNL1	5694,4860,32557
chr19:35626834-35627457	chr19	+	35626833	35627403	True	NM_005031,NM_021902,NM_139284,NM_022006	chr19,chr19,chr19,chr19	+,+,-,+	FXYD1,FXYD1,LGI4,FXYD7	2988,2328,-655,6750
chr16:68345197-68345691	chr16	+	68345347	68345731	True	NM_032178,NM_019023,NM_001184824	chr16,chr16,chr16	-,+,+	SLC7A6OS,PRMT7,PRMT7	-479,-521,-521
chr5:172664021-172664581	chr5	+	172664253	172664564	True	NM_004387,NM_013980,NM_001166175,NM_001166176	chr5,chr5,chr5,chr5	-,+,-,-	NKX2-5,BNIP1,NKX2-5,NKX2-5	-1938,-92859,-1938,-1938
chr15:78221381-78221825	chr15	+	78221555	78221771	True	NM_001101404,NR_027024	chr15,chr15	+,-	SH2D7,LOC645752	163155,-2367
chr15:78221381-78221825	chr15	-	72944472	72944522	False	NR_002780,NM_018652	chr15,chr15	-,+	HIGD2B,GOLGA6B	34018,2515
chr15:78221381-78221825	chr15	+	74377406	74377456	False	NM_001130136,NM_001038640	chr15,chr15	+,-	ISLR2,GOLGA6A	44258,-2515
chr15:78221381-78221825	chr15	-	75548333	75548383	False	NR_030360,NM_001164404	chr15,chr15	-,+	MIR631,GOLGA6C	97693,2515
chr15:78221381-78221825	chr15	-	75572610	75572660	False	NR_030360,NM_001145224	chr15,chr15	-,+	MIR631,GOLGA6D	73416,2521
chrX:23353957-23354219	chrX	+	23353961	23354243	True	NM_173495,NM_001033583	chrX,chrX	+,-	PTCHD1,ACOT9	-1035,407214
chr16:89768860-89769165	chr16	+	89768870	89769168	True	NR_036480,NM_152339	chr16,chr16	+,-	LOC100128881,SPATA2L	9095,-749
chr2:120535574-120537047	chr2	+	120535733	120536777	True	NM_002980,NM_002830	chr2,chr2	-,+	SCTR,PTPN4	-253705,-18584
chr13:46961811-46962062	chr13	+	46961860	46962056	True	NM_001164211,NM_025113	chr13,chr13	+,-	LRCH1,C13orf18	165239,-225
chr8:29938509-29939743	chr8	+	29938740	29939579	True	NM_016127,NM_015344	chr8,chr8	-,+	TMEM66,LEPROTL1	1120,13342
chr22:44569755-44570237	chr22	+	44569820	44570274	True	NR_024426,NR_024427,NM_022141,NM_001099294,NM_001137605,NM_001137606,NR_024428	chr22,chr22,chr22,chr22,chr22,chr22,chr22	+,+,+,-,+,+,+	PARVG,PARVG,PARVG,KIAA1644,PARVG,PARVG,PARVG	6495,-1035,6495,138507,-1035,6982,6941
chr10:69822439-69824030	chr10	+	69822681	69822851	True	NM_015601,NM_032578	chr10,chr10	-,+	HERC4,MYPN	12316,46398
chr20:44988320-44988576	chr20	+	44988404	44988572	True	NM_152854,NM_173073,NM_015945,NM_173179	chr20,chr20,chr20,chr20	+,-,-,-	CD40,SLC35C2,SLC35C2,SLC35C2	-241549,4542,4542,4542
chr11:64067655-64068041	chr11	+	64067749	64067923	True	NM_004451,NM_001039496,NM_032989,NM_033310	chr11,chr11,chr11,chr11	+,+,-,+	ESRRA,C11orf20,BAD,KCNK4	5120,-1,-15573,-9007
chr15:53096340-53096761	chr15	+	53096397	53096754	True	NM_004498,NM_002748	chr15,chr15	-,+	ONECUT1,MAPK6	-14188,-785037
chr10:32860230-32861964	chr10	+	32860418	32861639	True	NM_024688,NM_025209	chr10,chr10	+,-	C10orf68,EPC1	-3818,-224305
chr14:104028769-104029010	chr14	+	104028795	104029025	True	NM_032374,NM_001015049,NM_004873,NM_001015048	chr14,chr14,chr14,chr14	+,-,-,-	C14orf153,BAG5,BAG5,BAG5	273,-140,-140,176
chr6:41009568-41010373	chr6	+	41009879	41010335	True	NM_001010873,NM_001159726,NM_173561	chr6,chr6,chr6	+,+,-	TSPO2,TSPO2,UNC5CL	-3,121,-2941
chr8:120866987-120867569	chr8	+	120867066	120867588	True	NM_024094,NM_022783	chr8,chr8	-,+	DSCC1,DEPTOR	632,18311
chr12:96291106-96291966	chr12	+	96291417	96292014	True	NM_003095,NM_182496	chr12,chr12	+,-	SNRPF,CCDC38	-38766,44464
chr1:157805602-157805811	chr1	+	157805641	157805859	True	NM_005894,NM_018240	chr1,chr1	-,+	CD5L,KIRREL	5825,157203
chr12:44258900-44259354	chr12	+	44258996	44259241	True	NM_002822,NM_032256	chr12,chr12	-,+	TWF1,TMEM117	-58818,-29085
chr11:17099165-17099391	chr11	+	17099182	17099416	True	NM_005013,NM_001017	chr11,chr11	+,-	NUCB2,RPS13	198869,38
chr7:101269950-101270291	chr7	+	101270135	101270291	True	NM_138403,NM_001202543	chr7,chr7	-,+	MYL10,CUX1	2335,188892
chr18:10613900-10615098	chr18	+	10614234	10614964	True	NM_003826,NM_022068	chr18,chr18	+,-	NAPG,FAM38B	-88425,533848
chr18:10613900-10615098	chr18	-	12220865	12221019	False	NM_006796,NM_001279	chr18,chr18	-,+	AFG3L2,CIDEA	156306,33298
chr4:103899951-103901918	chr4	+	103900148	103901962	True	NM_001008388,NM_001100874	chr4,chr4	+,-	CISD2,NHEDC1	-110077,38984
chr19:15344525-15345135	chr19	+	15344904	15345116	True	NM_033025,NM_001142886,NM_024794	chr19,chr19,chr19	+,-,-	SYDE1,EPHX3,EPHX3	-126748,-1046,-1673
chr11:89660001-89660291	chr11	+	89660058	89660330	True	NM_001105522	chr11	+	TRIM49L1	-2880
chr11:89660001-89660291	chr11	+	55032621	55032780	False	NM_001004700,NM_024114	chr11,chr11	-,+	OR4C11,TRIM48	339228,-3123
chr11:89660001-89660291	chr11	-	89650477	89650749	False	NM_001105522	chr11	-	TRIM49L1	2880
chr21:33986404-33986721	chr21	+	33986475	33986551	True	NR_036552,NR_024622,NM_021254	chr21,chr21,chr21	-,+,-	C21orf59,C21orf49,C21orf59	-1562,157859,-1557
chr16:67216074-67217556	chr16	+	67216305	67217374	True	NM_001950,NM_178516,NM_003946,NM_001040715,NM_001185057	chr16,chr16,chr16,chr16,chr16	+,-,+,-,+	E2F4,EXOC3L1,NOL3,KIAA0895L,NOL3	8693,6783,-8601,559,-8592
chr19:4519236-4519921	chr19	+	4519240	4519710	True	NM_032631,NM_001080400	chr19,chr19	+,-	HDGFRP2,PLIN4	-47036,-1524
chr14:59655902-59656145	chr14	+	59656034	59656095	True	NM_014992,NM_022571	chr14,chr14	+,-	DAAM1,GPR135	-686,276015
chr6:109705381-109707137	chr6	+	109705520	109706991	True	NM_001142404,NM_001142402,NM_001142403,NM_001142401,NM_006016,NM_003080	chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,-,-,+	CD164,CD164,CD164,CD164,CD164,SMPD2	-1758,-1758,-1758,-1758,-1758,54939
chrX:100871601-100872284	chrX	+	100871651	100872307	True	NM_019007,NM_001009584,NM_001184768,NR_033670,NM_016607,NM_177948,NM_177947,NR_033669	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,+,+,+,-	ARMCX6,ARMCX6,ARMCX6,ARMCX6,ARMCX3,ARMCX3,ARMCX3,ARMCX6	734,734,734,734,5812,6043,5812,734
chr4:113606638-113607971	chr4	+	113606759	113607955	True	NM_015454,NR_029857	chr4,chr4	+,-	LARP7,MIR302B	-48207,-37046
chr16:67528395-67529398	chr16	+	67528599	67528880	True	NM_001138,NM_024519	chr16,chr16	-,+	AGRP,FAM65A	-10883,33836
chr1:207942762-207943198	chr1	+	207942762	207942975	True	NM_172361,NR_029832	chr1,chr1	+,-	CD46,MIR29C	-17430,32374
chr19:45203254-45203842	chr19	+	45203826	45203897	True	NM_001039213,NR_027754	chr19,chr19	+,-	CEACAM16,CEACAM22P	-1457,-143676
chr1:152648742-152650572	chr1	+	152648842	152650404	True	NM_178429,NM_178431,NM_014357	chr1,chr1,chr1	+,-,+	LCE2C,LCE3A,LCE2B	-1122,-53263,8194
chr2:190628087-190629648	chr2	+	190628410	190629473	True	NM_022353,NM_000534	chr2,chr2	-,+	OSGEPL1,PMS1	-486,19337
chr3:42740647-42740928	chr3	+	42740794	42740876	True	NM_152393,NM_020707,NR_027753	chr3,chr3,chr3	+,-,-	KBTBD5,HHATL,HHATL	-13835,3493,2187
chr3:48468224-48469894	chr3	+	48468412	48469683	True	NM_002673,NM_015933,NM_001130082	chr3,chr3,chr3	-,+,-	PLXNB1,CCDC72,PLXNB1	1239,12002,1827
chr7:100029230-100029567	chr7	+	100029291	100029601	True	NM_001194992,NM_001194991,NM_001194990,NM_019606,NM_017984,NM_145030	chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,-,-	MEPCE,MEPCE,MEPCE,MEPCE,ZCWPW1,C7orf47	-2929,-2929,-2929,-2088,-2989,4543
chr15:31622157-31622506	chr15	+	31622165	31622475	True	NM_015995,NM_002420	chr15,chr15	+,-	KLF13,TRPM1	-3133,-228241
chr4:128984856-128985281	chr4	+	128985049	128985157	True	NM_032239,NM_018078,NM_178043,NM_152778	chr4,chr4,chr4,chr4	+,+,+,-	LARP1B,LARP1B,LARP1B,MFSD8	-2607,-2607,-2607,-97910
chr19:48948063-48948421	chr19	+	48948125	48948457	True	NM_006801,NM_031485	chr19,chr19	-,+	KDELR1,GRWD1	-53315,572
chr11:61957806-61958191	chr11	+	61957845	61958211	True	NM_006552,NM_206998	chr11,chr11	+,-	SCGB1D1,SCGB1D4	-186,108375
chr2:231983451-231984756	chr2	+	231983545	231984669	True	NM_000867,NR_034059	chr2,chr2	-,+	HTR2B,PSMD1	5211,-62031
chr3:58195708-58196928	chr3	+	58195709	58196924	True	NM_020676,NM_004944	chr3,chr3	+,-	ABHD6,DNASE1L3	26334,3524
chr22:50607728-50607931	chr22	+	50607789	50607855	True	NR_027691,NM_052839,NM_001160300,NM_020461	chr22,chr22,chr22,chr22	+,+,+,-	PANX2,PANX2,PANX2,TUBGCP6	1304,1304,1304,75595
chr9:116038863-116039185	chr9	+	116038863	116039067	True	NM_139286,NM_004697	chr9,chr9	-,+	CDC26,PRPF4	-994,-940
chr4:81105455-81105680	chr4	+	81105487	81105598	True	NM_020226,NM_001145794	chr4,chr4	+,-	PRDM8,ANTXR2	825,-111010
chr9:112295723-112296052	chr9	+	112295793	112296035	True	NM_002829,NM_001037293	chr9,chr9	-,+	PTPN3,PALM2	-35200,107032
chr9:35098709-35099378	chr9	+	35098837	35099069	True	NM_032634,NM_203299,NM_152850,NM_013442,NM_001201484	chr9,chr9,chr9,chr9,chr9	-,+,-,-,-	PIGO,C9orf131,PIGO,STOML2,PIGO	-2291,-56665,-2239,4135,-2291
chrX:153170021-153170345	chrX	+	153170142	153170212	True	NM_001164741,NM_001146151,NM_000054,NR_027419	chrX,chrX,chrX,chrX	-,+,+,+	ARHGAP4,AVPR2,AVPR2,AVPR2	21552,316,316,-2208
chr14:65880174-65880694	chr14	+	65880299	65880712	True	NM_178155,NM_178154,NR_024334,NM_004480,NM_178156	chr14,chr14,chr14,chr14,chr14	+,+,-,+,+	FUT8,FUT8,LOC645431,FUT8,FUT8	-2510,-815,-964,-815,-2510
chr6:25138315-25139939	chr6	+	25138321	25139702	True	NR_002174,NM_001173977,NR_027626	chr6,chr6,chr6	-,+,-	CMAH,LRRC16A,CMAH	-270,139953,35
chr19:35632449-35633485	chr19	+	35632723	35633295	True	NM_005031,NM_022006,NM_139284,NM_021902	chr19,chr19,chr19,chr19	+,+,-,+	FXYD1,FXYD7,LGI4,FXYD1	-2384,858,-6545,-3044
chr8:24813621-24813890	chr8	+	24813693	24813907	True	NM_006158,NM_001105541	chr8,chr8	-,+	NEFL,NEFM	274,-41289
chr16:34404142-34404635	chr19	+	59068262	59068444	True	NM_198426,NR_027334,NM_003969,NM_014453	chr19,chr19,chr19,chr19	-,+,-,-	CHMP2A,LOC100131691,UBE2M,CHMP2A	-1907,2108,2081,-1776
chr16:67063879-67064661	chr16	+	67063950	67064360	True	NR_024525,NM_001755,NM_022845	chr16,chr16,chr16	-,+,+	FAM96B,CBFB,CBFB	-95630,-951,-951
chr4:40515894-40516376	chr4	+	40516024	40516340	True	NM_019027,NM_017581	chr4,chr4	-,+	RBM47,CHRNA9	1706,-178612
chrX:154828199-154829476	chrX	+	154828552	154829518	True	NM_018196,NR_036260	chrX,chrX	-,+	TMLHE,MIR1184-3	13154,-141427
chr8:39619457-39621307	chr8	+	39619651	39621331	True	NM_001464,NM_002164	chr8,chr8	-,+	ADAM2,IDO1	74504,149996
chr1:94138278-94139758	chr1	+	94138430	94139805	True	NR_034091,NM_003567	chr1,chr1	+,-	LOC100129046,BCAR3	-80956,7630
chrX:150890016-150890829	chrX	+	150890233	150890824	True	NR_029973,NM_033085	chrX,chrX	-,+	MIR452,FATE1	237411,-5776
chr22:17565294-17565692	chr22	+	17565402	17565638	True	NM_031890,NM_014339	chr22,chr22	-,+	CECR6,IL17RA	36625,212
chr8:144731302-144732982	chr8	+	144731503	144732899	True	NM_014789,NM_003313	chr8,chr8	+,-	ZNF623,TSTA3	114,-31771
chr1:166579182-166579419	chr1	+	166579188	166579356	True	NM_053053,NR_002925	chr1,chr1	-,+	TADA1,FMO9P	266354,-6086
chr12:58145659-58145968	chr12	+	58145698	58145908	True	NM_005981,NM_014770,NM_138396,NM_000075	chr12,chr12,chr12,chr12	+,-,+,-	TSPAN31,AGAP2,MARCH9,CDK4	-6965,-9758,2991,306
chr3:12882083-12882606	chr3	+	12882082	12882650	True	NM_001007073,NM_012298,NR_002582,NM_000994,NM_001007074	chr3,chr3,chr3,chr3,chr3	-,+,-,-,-	RPL32,CAND2,SNORA7A,RPL32,RPL32	481,-43962,-133,481,-133
chr1:179832283-179832683	chr1	+	179832389	179832697	True	NM_015602,NM_001199260	chr1,chr1	+,-	TOR1AIP1,TOR1AIP2	18722,14294
chr11:64511389-64511784	chr11	+	64511408	64511644	True	NM_001098671,NM_001098670,NM_153378,NM_153819	chr11,chr11,chr11,chr11	-,-,+,-	RASGRP2,RASGRP2,SLC22A12,RASGRP2	36,735,-153177,1334
chr7:75107402-75107791	chr7	+	75107615	75107831	True	NM_001099415,NM_001099435	chr7,chr7	-,+	POM121C,SPDYE5	7787,16467
chr7:75107402-75107791	chr7	-	72357792	72357960	False	NR_003666,NM_172020	chr7,chr7	-,+	SPDYE7P,POM121	-18137,-7907
chr7:75107402-75107791	chr7	-	102012559	102012775	False	NM_024653,NM_001146210	chr7,chr7	+,-	PRKRIP1,SPDYE6	24028,-15670
chr17:57783843-57784192	chr17	+	57783868	57784019	True	NM_030938,NM_016077	chr17,chr17	+,-	VMP1,PTRH2	843,892
chr9:17147881-17149606	chr9	+	17147883	17148759	True	NM_017637,NM_017738	chr9,chr9	-,+	BNC2,CNTLN	-277097,-12896
chr7:139207824-139208137	chr7	+	139207935	139208079	True	NM_001080511,NM_198508	chr7,chr7	+,-	CLEC2L,KLRG2	594,-39478
chr2:19557838-19558167	chr2	+	19557935	19558117	True	NM_145260,NR_033875	chr2,chr2	-,+	OSR1,FLJ12334	305,510497
chr5:9900891-9901846	chr5	+	9901021	9901855	True	NR_027112,NM_012073	chr5,chr5	-,+	LOC285692,CCT5	2131,348426
chr6:26458893-26459826	chr6	+	26459346	26459788	True	NM_001197233,NM_001197234,NM_078476,NM_003543,NM_007049	chr6,chr6,chr6,chr6,chr6	+,+,+,-,+	BTN2A1,BTN2A1,BTN2A1,HIST1H4H,BTN2A1	-1220,-1245,-1245,-173619,-1245
chr3:183873403-183873608	chr3	+	183873503	183873593	True	NM_005787,NM_004423	chr3,chr3	-,+	ALG3,DVL3	93216,-270
chr4:69427567-69428124	chr4	+	69427567	69428184	True	NM_014058,NM_001077,NM_001076	chr4,chr4,chr4	+,-,-	TMPRSS11E,UGT2B17,UGT2B15	-114459,6123,6118
chr10:101191160-101191405	chr10	+	101191169	101191453	True	NM_002079,NM_145285	chr10,chr10	-,+	GOT1,NKX2-3	-639,101236
chr3:54951836-54952685	chr3	+	54951906	54952658	True	NM_018398,NM_020678	chr3,chr3	+,-	CACNA2D3,LRTM1	-795272,9464
chr1:155053450-155053661	chr1	+	155053502	155053562	True	NM_144622,NM_004952	chr1,chr1	-,+	DCST2,EFNA3	-47245,-2205
chr20:58533794-58534613	chr20	+	58533850	58534540	True	NM_177980,NM_006242	chr20,chr20	+,-	CDH26,PPP1R3D	-430,-18498
chr14:101292551-101292894	chr14	+	101292569	101292943	True	NR_003531,NR_003530,NR_033360,NR_002766,NR_033358,NR_033359,NM_001134888	chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,+,+,+,-	MEG3,MEG3,MEG3,MEG3,MEG3,MEG3,RTL1	-175,-175,-175,-175,-175,-175,58291
chr19:6464722-6465154	chr19	+	6464958	6465136	True	NM_139161,NM_174881,NM_024103	chr19,chr19,chr19	+,+,-	CRB3,CRB3,SLC25A23	-750,-750,-5177
chr20:25128296-25128535	chr20	+	25128305	25128577	True	NR_027092,NR_027093,NR_027091,NM_001114089	chr20,chr20,chr20,chr20	-,-,-,+	LOC284798,LOC284798,LOC284798,ENTPD6	834,102,899,47761
chr1:26347605-26348482	chr1	+	26347633	26348160	True	NM_004455,NM_000437	chr1,chr1	+,-	EXTL1,PAFAH2	110,-22985
chr19:55595241-55595954	chr19	+	55595418	55595840	True	NM_133180,NM_138412,NM_017729	chr19,chr19,chr19	+,-,+	EPS8L1,RDH13,EPS8L1	-8248,-14504,-3709
chr19:55415311-55416049	chr19	+	55415629	55415824	True	NM_004829,NR_027041,NR_027043,NM_001127255,NM_001145457,NM_001145458	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,-,+,+	NCR1,NCR1,NCR1,NLRP7,NCR1,NCR1	1683,1683,1683,43102,1683,1683
chr11:64513934-64514144	chr11	+	64513958	64514136	True	NM_001098671,NM_001098670,NM_153378,NM_153819	chr11,chr11,chr11,chr11	-,-,+,-	RASGRP2,RASGRP2,SLC22A12,RASGRP2	-2328,-1629,-155727,-1030
chr1:161167240-161167868	chr1	+	161167294	161167884	True	NM_004550,NM_005099,NM_001166159	chr1,chr1,chr1	+,-,+	NDUFS2,ADAMTS4,NDUFS2	1220,1011,4052
chr2:214146552-214146923	chr2	+	214146838	214146941	True	NM_001079526,NM_024532,NM_001025436	chr2,chr2,chr2	-,+,+	IKZF2,SPAG16,SPAG16	-130505,2174,2174
chr19:49928847-49929289	chr19	+	49928849	49929283	True	NM_001195256,NM_178449	chr19,chr19	+,-	LOC645971,PTH2	404,-2151
chr17:65365607-65366406	chr17	+	65365764	65366268	True	NM_002816,NM_181671,NM_012417,NM_174871	chr17,chr17,chr17,chr17	-,+,+,-	PSMD12,PITPNC1,PITPNC1,PSMD12	-3043,7655,7655,-3043
chr3:142837600-142837973	chr3	+	142837683	142837934	True	NM_004267,NR_034032	chr3,chr3	+,-	CHST2,LOC100289361	733,-117374
chr14:24604166-24604849	chr14	+	24604519	24604821	True	NM_016049,NM_006263,NM_176783,NM_203402	chr14,chr14,chr14,chr14	-,+,+,+	FAM158A,PSME1,PSME1,FITM1	6026,556,556,-3895
chr9:114519675-114520595	chr9	+	114519699	114520145	True	NM_001080551,NM_001198664	chr9,chr9	-,+	C9orf84,GNG10	1726,-95901
chr15:25420953-25421932	chr15	+	25421093	25421949	True	NR_003304,NM_130838,NR_003298,NR_003299,NR_001291,NR_003300,NR_003301,NR_003302,NR_003296,NR_003297,NR_003294,NR_003295	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,-,+,+,+,+,+,+,+,+,+,+	SNORD115-12,UBE3A,SNORD115-6,SNORD115-7,SNORD115-1,SNORD115-8,SNORD115-9,SNORD115-10,SNORD115-4,SNORD115-5,SNORD115-2,SNORD115-3	1938,228754,3694,5582,-5274,7503,1938,1938,29,1935,-3362,-1070
chr15:78862068-78862759	chr15	+	78862086	78862603	True	NM_001166694,NM_000745	chr15,chr15	-,+	CHRNA3,CHRNA5	51090,-4282
chr20:30944952-30945793	chr20	+	30944970	30945710	True	NM_080616,NM_015338,NM_001164603	chr20,chr20,chr20	-,+,+	C20orf112,ASXL1,ASXL1	125628,436,436
chr8:125741637-125741916	chr8	+	125741637	125741959	True	NM_005005,NM_014751	chr8,chr8	+,-	NDUFB9,MTSS1	-190349,-907
chr6:7915833-7916322	chr6	+	7915903	7916249	True	NR_027712,NM_001145549,NM_030810	chr6,chr6,chr6	+,-,-	PIP5K1P1,TXNDC5,TXNDC5	70085,-5593,-4856
chr17:56295863-56296394	chr17	+	56295862	56296336	True	NM_001165927,NM_017777,NM_001160102	chr17,chr17,chr17	-,-,+	MKS1,MKS1,LPO	680,380,19450
chr1:159824306-159824524	chr1	+	159824318	159824572	True	NM_020125,NM_001013661,NM_001134233	chr1,chr1,chr1	+,-,-	SLAMF8,VSIG8,C1orf204	-27890,7925,615
chr22:25380042-25380979	chr22	+	25380076	25380967	True	NM_001001663,NM_001145206	chr22,chr22	-,+	TMEM211,KIAA1671	-44762,42973
chr3:151160327-151161455	chr3	+	151160640	151161496	True	NM_001178146,NR_031678,NM_001178145	chr3,chr3,chr3	-,+,-	IGSF10,MIR548H2,IGSF10	-2062,185823,-2062
chr1:113616140-113616441	chr1	+	113616193	113616490	True	NM_003051,NM_014813	chr1,chr1	-,+	SLC16A1,LRIG2	-117218,-413
chr18:60380064-60381149	chr18	+	60380413	60381170	True	NM_194449,NM_176787	chr18,chr18	+,-	PHLPP1,PIGN	1501,-526124
chr2:219523656-219523900	chr2	+	219523690	219523888	True	NM_001105537,NM_004328,NM_001079866	chr2,chr2,chr2	-,+,+	ZNF142,BCS1L,BCS1L	423,490,490
chr9:130550750-130550981	chr9	+	130550897	130550961	True	NM_001261,NM_170600,NR_036055	chr9,chr9,chr9	+,-,+	CDK9,SH2D3C,MIR2861	-2643,-9849,-2751
chr2:175351800-175352062	chr2	+	175351879	175351973	True	NM_001033045,NM_152529,NM_024583	chr2,chr2,chr2	-,-,+	GPR155,GPR155,SCRN3	-68,-68,-91473
chr9:127908114-127910024	chr9	+	127908219	127910059	True	NM_001144877,NM_001174152,NM_173690	chr9,chr9,chr9	-,+,-	SCAI,RABEPK,SCAI	-2381,52761,-2381
chr6:138724775-138725229	chr6	+	138724813	138725083	True	NR_036099,NM_014320	chr6,chr6	-,+	MIR3145,HEBP2	31398,252
chr3:170283382-170284477	chr3	+	170283529	170284493	True	NM_020949,NM_001185056	chr3,chr3	-,+	SLC7A14,CLDN11	19420,-144553
chr16:85620986-85621389	chr16	+	85620988	85621416	True	NM_001134473,NM_016095	chr16,chr16	+,-	KIAA0182,GINS2	23612,101222
chr16:14164089-14164912	chr16	+	14164147	14164891	True	NM_014048,NM_001134477	chr16,chr16	+,-	MKL2,PARN	304,559279
chr9:77115224-77115600	chr9	+	77115232	77115572	True	NM_006914,NM_001177311	chr9,chr9	+,-	RORB,TRPM6	-3031,386741
chr7:25219495-25219695	chr7	+	25219523	25219711	True	NM_138811,NM_016447	chr7,chr7	-,+	C7orf31,MPP6	156,-606489
chr9:16871769-16872000	chr9	+	16871859	16871983	True	NM_017637,NM_001114395	chr9,chr9	-,+	BNC2,CNTLN	-1073,263054
chr1:16693629-16693833	chr1	+	16693653	16693853	True	NM_018994,NM_015609,NM_001114600	chr1,chr1,chr1	-,+,+	FBXO42,C1orf144,C1orf144	-14705,-121,-121
chr22:25714271-25714570	chr22	+	25714296	25714550	True	NR_029395,NM_182492	chr22,chr22	+,-	IGLL3P,LRP5L	-123,44024
chr19:55795036-55795353	chr19	+	55795098	55795194	True	NM_012267,NM_032430,NM_001130106	chr19,chr19,chr19	-,+,-	HSPBP1,BRSK1,HSPBP1	-3347,339,-3347
chr8:39184520-39185455	chr8	+	39184638	39185144	True	NR_001448,NR_001569	chr8,chr8	+,-	ADAM5P,ADAM3A	-12507,195376
chr22:38432893-38433690	chr22	+	38433038	38433166	True	NM_013356,NM_001039583	chr22,chr22	-,+	SLC16A8,PICK1	46054,20095
chr17:80192235-80192537	chr17	+	80192322	80192470	True	NM_001042423,NM_001042422,NM_004207,NM_198082	chr17,chr17,chr17,chr17	+,+,+,-	SLC16A3,SLC16A3,SLC16A3,CCDC57	-2229,-6080,-5484,-21633
chr6:88030567-88032173	chr6	+	88030566	88032094	True	NM_198568,NM_001042493,NM_020425	chr6,chr6,chr6	-,+,+	GJB7,C6orf162,C6orf162	6952,211,211
chr8:126105020-126105390	chr8	+	126105052	126105368	True	NM_014846,NM_173685	chr8,chr8	-,+	KIAA0196,NSMCE2	-991,-1031
chr13:43598339-43598570	chr13	+	43598345	43598473	True	NM_013238,NM_033255	chr13,chr13	+,-	DNAJC15,EPSTI1	-1034,-31968
chr2:26470334-26472121	chr2	+	26470417	26472078	True	NM_000182,NM_000183	chr2,chr2	-,+	HADHA,HADHB	-2823,-2853
chr12:77271906-77272170	chr12	+	77271972	77272119	True	NM_001321,NM_015336	chr12,chr12	-,+	CSRP2,ZDHHC17	731,-114169
chr1:149822816-149823082	chr1	+	149822827	149823063	True	NM_001040874,NM_001005464,NM_003548,NR_036461,NM_001034077,NM_003516,NM_021059	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,-,-,+,+	HIST2H2AA4,HIST2H3A,HIST2H4A,HIST2H2BC,HIST2H4B,HIST2H2AA3,HIST2H3C	-250,1117,9712,-487,9712,-250,1117
chr1:149822816-149823082	chr1	-	149813882	149814118	False	NM_001040874,NM_001005464,NM_003548,NR_036461,NM_001034077,NM_003516,NM_021059	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,+,-,+,-,-	HIST2H2AA4,HIST2H3A,HIST2H4A,HIST2H2BC,HIST2H4B,HIST2H2AA3,HIST2H3C	250,-1117,-9712,8272,-9712,250,-1117
chr3:74440165-74440807	chr3	+	74440238	74440584	True	NR_031714,NM_020872	chr3,chr3	+,-	MIR1324,CNTN3	1239329,129809
chr19:18684708-18685189	chr19	+	18685051	18685118	True	NM_012181,NM_001033930,NM_003333	chr19,chr19,chr19	-,+,+	FKBP8,UBA52,UBA52	-30668,-2497,-2497
chr1:62907881-62909652	chr1	+	62908121	62909671	True	NM_001017415,NM_001017416,NM_181712,NM_003368	chr1,chr1,chr1,chr1	+,+,-,+	USP1,USP1,KANK4,USP1	-6207,-6207,-123038,-5799
chr15:43787937-43789044	chr15	+	43788184	43788796	True	NM_002373,NM_001141980,NM_001141979	chr15,chr15,chr15	+,-,-	MAP1A,TP53BP1,TP53BP1	21009,-2830,-2830
chr15:72492045-72492836	chr15	+	72492167	72492695	True	NM_001012642,NM_145204	chr15,chr15	-,+	GRAMD2,SENP8	-2031,-81587
chr6:37790570-37791188	chr6	+	37790579	37791227	True	NM_153487,NM_021943	chr6,chr6	-,+	MDGA1,ZFAND3	-124813,-3323
chr1:29482-29707	chr12	-	74104	74204	False	NR_028269,NR_026823	chr12,chr12	+,-	LOC100288778,FAM138D	13779,75258
chr1:29482-29707	chr19	+	71088	71188	False	NR_026820,NR_026818,NM_001005240,NR_033266	chr19,chr19,chr19,chr19	-,-,+,-	FAM138F,FAM138A,OR4F17,WASH5P	6552,6552,39490,-122
chr1:29482-29707	chr1	+	29481	29581	True	NM_001005221,NR_028325	chr1,chr1	-,+	OR4F29,LOC100132062	592503,294310
chr1:29482-29707	chr9	+	29259	29317	False	NM_182905,NM_203447,NR_026822	chr9,chr9,chr9	-,+,-	WASH1,DOCK8,FAM138C	472,185547,6597
chr11:119235370-119235608	chr11	+	119235376	119235636	True	NM_171997,NR_034160	chr11,chr11	-,+	USP2,LOC100499227	-484,16851
chr19:2842425-2842760	chr19	+	2842432	2842743	True	NM_152791,NM_001172775,NM_003021	chr19,chr19,chr19	+,+,-	ZNF555,ZNF555,SGTA	-1050,-1050,-59078
chrX:19950449-19950947	chrX	+	19950497	19951006	True	NM_001173456,NM_198279	chrX,chrX	+,-	PDHA1,CXorf23	-588543,37436
chr21:37433354-37434221	chr21	+	37433376	37434272	True	NM_017438,NM_001007259,NM_001757	chr21,chr21,chr21	-,-,+	SETD4,SETD4,CBR1	-560,-765,8012
chr17:898958-899483	chr17	+	899201	899327	True	NM_013337,NM_022463	chr17,chr17	+,-	TIMM22,NXN	1029,-16191
chr7:97841817-97842053	chr7	+	97841856	97842030	True	NM_015395,NM_177455	chr7,chr7	-,+	TECPR1,BHLHA15	39488,-341
chr19:54369779-54370280	chr19	+	54369960	54370270	True	NM_138373,NM_144687,NM_001020821,NM_001020820,NM_001020818,NM_001020819	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+	MYADM,NLRP12,MYADM,MYADM,MYADM,MYADM	866,-42312,2389,-400,2510,866
chr2:60959683-60960686	chr2	+	60959774	60960014	True	NM_022894,NR_033980	chr2,chr2	+,-	PAPOLG,FLJ16341	23350,148499
chr1:221047543-221047791	chr1	+	221047543	221047758	True	NM_021958,NR_024236	chr1,chr1	+,-	HLX,LOC400804	4984,461931
chr19:47552709-47552928	chr19	+	47552719	47552867	True	NM_002517,NM_017854	chr19,chr19	+,-	NPAS1,TMEM160	-28634,-837
chr12:133068394-133069078	chr12	+	133068647	133069047	True	NM_001142641,NM_001195520	chr12,chr12	+,-	FBRSL1,LOC645277	-1541,118040
chr8:70441350-70442407	chr8	+	70441576	70442444	True	NM_001128206,NM_001146009	chr8,chr8	+,-	SULF1,SLCO5A1	-36606,303010
chr3:123814424-123814759	chr3	+	123814527	123814783	True	NR_028136,NM_003947,NM_001024660,NM_017578	chr3,chr3,chr3,chr3	+,+,+,-	KALRN,KALRN,KALRN,ROPN1	-1030,-1030,-1030,-104328
chr19:3771871-3772243	chr19	+	3772050	3772262	True	NM_032753,NM_172251	chr19,chr19	-,+	RAX2,MRPL54	7,-9436
chr5:80256909-80257257	chr5	+	80256973	80257233	True	NM_006909,NM_000791	chr5,chr5	+,-	RASGRF2,DHFR	-466,-306173
chr19:52646263-52646470	chr19	+	52646274	52646370	True	NM_014225,NM_178523	chr19,chr19	+,-	PPP2R1A,ZNF616	46684,-3083
chr21:43298153-43298667	chr21	+	43298158	43298542	True	NM_022115,NR_027273,NM_001040424	chr21,chr21,chr21	-,+,-	PRDM15,C21orf121,PRDM15	1102,143570,1093
chr7:139165998-139166395	chr7	+	139166098	139166406	True	NM_198508,NM_001080511	chr7,chr7	-,+	KLRG2,CLEC2L	2101,42267
chrX:15331375-15331893	chrX	+	15331641	15331864	True	NM_001201583,NM_080873,NM_001012428,NM_203281	chrX,chrX,chrX,chrX	-,-,-,+	ASB11,ASB11,ASB11,BMX	1939,1939,874,187035
chr22:35545508-35546620	chr22	+	35545751	35546513	True	NM_001008494,NM_005368	chr22,chr22	+,-	ISX,MB	-83673,466921
chr15:72563865-72564339	chr15	+	72563889	72564299	True	NM_020214,NR_027262	chr15,chr15	-,+	PARP6,C15orf34	-261,104154
chr3:141721130-141721935	chr3	+	141721338	141721820	True	NM_001178140,NM_001679	chr3,chr3	-,+	TFDP2,ATP1B3	-2109,-125931
chr1:70384659-70385267	chr1	+	70384705	70385279	True	NM_017768,NR_023916	chr1,chr1	-,+	LRRC40,PIN1P1	286132,27
chr8:27344292-27345024	chr8	+	27344326	27344858	True	NM_001979,NM_000742	chr8,chr8	+,-	EPHX2,CHRNA2	3786,-7513
chr19:37568115-37568857	chr19	+	37568144	37568886	True	NM_144689,NM_199126	chr19,chr19	+,-	ZNF420,ZNF585A	495,94497
chr8:66579753-66580503	chr8	+	66579991	66580387	True	NM_018120,NM_001145838	chr8,chr8	-,+	ARMC1,MTFR1	-33539,1720
chr10:35104926-35105136	chr10	+	35104974	35105116	True	NM_019619,NM_001184789,NM_001184788,NM_001184790,NM_001184791,NM_001184792,NM_001184793,NM_001184787,NM_001184786,NM_001184785,NM_001184794,NM_001881	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,-,-,-,-,-,-,-,+	PARD3,PARD3,PARD3,PARD3,PARD3,PARD3,PARD3,PARD3,PARD3,PARD3,PARD3,CREM	-721,-721,-721,-721,-721,-721,-721,-721,-721,-721,-721,310684
chr2:70484027-70484828	chr2	+	70484288	70484697	True	NM_016297,NM_022173,NM_022037	chr2,chr2,chr2	+,-,-	PCYOX1,TIA1,TIA1	533,-8509,-8509
chr20:60815252-60816339	chr20	+	60815464	60816120	True	NM_007232,NM_014835,NM_144498	chr20,chr20,chr20	-,+,+	HRH3,OSBPL2,OSBPL2	-20141,-1948,-1948
chr1:219587773-219588837	chr1	+	219587936	219588864	True	NM_138794,NM_018713	chr1,chr1	+,-	LYPLAL1,SLC30A10	-240799,513179
chr10:1070428-1071900	chr10	+	1070526	1071831	True	NM_033261,NR_024628,NR_024629,NR_027708,NR_027709	chr10,chr10,chr10,chr10,chr10	-,+,+,+,+	IDI2,IDI2-AS1,IDI2-AS1,IDI2-AS1,IDI2-AS1	18,-2000,-2000,-2000,-2000
chr4:40201914-40202431	chr4	+	40201918	40202394	True	NM_004310,NR_027277	chr4,chr4	+,-	RHOH,LOC344967	-3442,-143099
chr20:25387448-25387838	chr20	+	25387597	25387891	True	NM_021067,NM_001042472	chr20,chr20	+,-	GINS1,ABHD12	431,-15979
chr11:62438461-62438955	chr11	+	62438627	62438939	True	NM_015853,NR_004390,NM_001043229,NM_001085372,NM_024099	chr11,chr11,chr11,chr11,chr11	-,+,+,+,-	UBXN1,SNORA57,METTL12,C11orf83,C11orf48	7638,-5788,-5903,186,352
chr17:79519884-79520147	chr17	+	79519916	79520196	True	NR_033338,NM_012418,NM_025161	chr17,chr17,chr17	-,+,-	C17orf70,FSCN2,C17orf70	-487,-24550,-487
chr3:52810951-52811344	chr3	+	52811247	52811339	True	NM_003157,NM_001166436,NM_001166435,NM_002215,NM_001193533,NM_001166434	chr3,chr3,chr3,chr3,chr3,chr3	-,+,+,+,-,+	NEK4,ITIH1,ITIH1,ITIH1,NEK4,ITIH1	-6282,2597,2597,268,-6282,1183
chr7:139027059-139027367	chr7	+	139027059	139027305	True	NR_033999,NM_197964	chr7,chr7	-,+	LOC100129148,C7orf55	85023,-1216
chr17:76355783-76356020	chr17	+	76355811	76355989	True	NM_003955,NM_024419	chr17,chr17	-,+	SOCS3,PGS1	219,18745
chr9:107526377-107526613	chr9	+	107526444	107526586	True	NM_018376,NM_001001956	chr9,chr9	+,-	NIPSNAP3B,OR13C9	-44,-145959
chrX:137871421-137871933	chrX	+	137871632	137871876	True	NM_033642,NR_028597	chrX,chrX	-,+	FGF13,SRD5A1P1	-50117,657101
chr1:763426-763812	chr6	-	170921136	170921373	False	NM_001172085,NM_001199461	chr6,chr6	+,-	TBP,PDCD2	-57777,-27356
chr1:763426-763812	chr1	+	763465	763701	True	NR_024321,NR_015368	chr1,chr1	-,+	NCRNA00115,LOC643837	-563,-452
chr1:763426-763812	chr8	-	181721	181818	False	NM_001042416,NM_001042415,NR_003572,NM_173539	chr8,chr8,chr8,chr8	+,+,-,+	ZNF596,ZNF596,RPL23AP53,ZNF596	565,565,550,381
chr1:193091982-193092516	chr1	+	193092002	193092279	True	NM_024529,NM_016066	chr1,chr1	+,-	CDC73,GLRX2	-973,-16758
chr2:947138-949081	chr2	+	947641	948989	True	NM_018968,NR_033880	chr2,chr2	+,-	SNTG2,LOC339822	-1139,-83529
chr2:28972470-28973575	chr2	+	28972553	28973261	True	NM_206876,NM_017910,NM_002709	chr2,chr2,chr2	+,-,+	PPP1CB,TRMT61B,PPP1CB	1352,119964,1364
chr6:152124780-152125859	chr6	+	152124816	152125846	True	NM_017909,NM_000125,NM_001122741,NM_001122740	chr6,chr6,chr6,chr6	-,+,+,+	RMND1,ESR1,ESR1,ESR1	-351500,2967,961,2607
chr19:10677083-10677375	chr19	+	10677091	10677323	True	NM_023008,NM_079421,NR_031603,NM_001800	chr19,chr19,chr19,chr19	-,-,+,-	KRI1,CDKN2D,MIR1238,CDKN2D	-389,2391,-14344,2367
chr10:27786657-27788393	chr10	+	27787163	27788226	True	NM_021252,NM_001034842	chr10,chr10	+,-	RAB18,PTCHD3	5022,-83866
chr8:115039726-115040634	chr8	+	115039731	115040686	True	NR_031745,NM_198123	chr8,chr8	+,-	MIR2053,CSMD3	-1384061,-590489
chr13:102066897-102068321	chr13	+	102067117	102068049	True	NM_052867,NM_004791	chr13,chr13	-,+	NALCN,ITGBL1	814,36916
chr8:27468746-27468999	chr8	+	27468773	27468895	True	NM_001831,NM_016240,NM_203339,NM_001171138	chr8,chr8,chr8,chr8	-,+,-,-	CLU,SCARA3,CLU,CLU	3482,22681,93,423
chr3:52490091-52490311	chr3	+	52490136	52490274	True	NM_003280,NM_007184	chr3,chr3	-,+	TNNC1,NISCH	-2079,-663
chr2:234576873-234578370	chr2	+	234577343	234578287	True	NM_001001394,NM_021027	chr2,chr2	-,+	DNAJB3,UGT1A9	74425,2256
chr6:167655302-167656014	chr6	+	167655342	167655976	True	NM_005299,NM_001143947	chr6,chr6	-,+	GPR31,UNC93A	-84023,48826
chr6:167655302-167656014	chr6	-	167679730	167679781	False	NM_005299,NM_001143947	chr6,chr6	-,+	GPR31,UNC93A	-108411,25021
chr19:22954344-22954610	chr19	+	22954343	22954450	True	NM_020855,NM_001080409	chr19,chr19	+,-	ZNF492,ZNF99	-137270,-1559
chr14:66976138-66976586	chr14	+	66976183	66976632	True	NM_015994,NM_001024218,NM_020806	chr14,chr14,chr14	-,+,+	ATP6V1D,GPHN,GPHN	850145,-2109,-2109
chr16:70100770-70101799	chr16	+	70100887	70101666	True	NR_036265,NR_003610	chr16,chr16	+,-	MIR1972-2,PDXDC2P	-36689,-1036
chr16:70100770-70101799	chr16	-	15067697	15067756	False	NM_015027,NM_173474	chr16,chr16	+,-	PDXDC1,NTAN1	1076,82136
chr11:61162297-61163873	chr11	+	61162778	61163655	True	NM_001173990,NM_001173991,NM_153611,NM_016499,NM_024811	chr11,chr11,chr11,chr11,chr11	+,+,-,+,-	TMEM216,TMEM216,CYBASC3,TMEM216,CPSF7	-3005,-3005,-33023,-2972,33785
chr9:37422251-37422480	chr9	+	37422258	37422472	True	NM_012203,NM_014872	chr9,chr9	+,-	GRHPR,ZBTB5	234,42985
chr5:168006695-168007858	chr5	+	168006930	168007620	True	NM_024594,NR_031721	chr5,chr5	-,+	PANK3,MIR103-1AS	-316,-19072
chr8:101663239-101664252	chr8	+	101663421	101664214	True	NR_033962,NM_152628	chr8,chr8	+,-	FLJ42969,SNX31	400067,-1528
chr6:10434107-10434905	chr6	+	10434250	10434888	True	NR_033910,NR_027793	chr6,chr6	+,-	LOC100130275,C6orf218	-21750,227
chr3:57310346-57310712	chr3	+	57310432	57310741	True	NM_012096,NM_130387	chr3,chr3	+,-	APPL1,ASB14	-48724,2290
chr8:33371351-33371913	chr8	+	33371606	33371837	True	NM_001102401,NM_025115,NM_032509	chr8,chr8,chr8	-,-,+	C8orf41,C8orf41,MAK16	-903,-950,-28972
chr2:180594935-180596246	chr2	+	180595207	180596292	True	NM_182678,NM_001113397	chr2,chr2	+,-	UBE2E3,ZNF385B	1248819,14530
chr19:9938855-9939164	chr19	+	9938876	9939174	True	NM_001048241,NM_024292,NM_006221,NM_017703	chr19,chr19,chr19,chr19	+,+,+,-	UBL5,UBL5,PIN1,FBXL12	-359,-359,6824,-9145
chr16:27278104-27279140	chr16	+	27278597	27278942	True	NM_145080,NR_037184	chr16,chr16	-,+	NSMCE1,FLJ21408	1228,583
chr19:40475923-40476564	chr19	+	40476060	40476480	True	NM_153001,NM_003890,NM_006503	chr19,chr19,chr19	+,-,+	PSMC4,FCGBP,PSMC4	592,-35527,592
chr22:18042135-18043642	chr22	+	18042284	18043594	True	NM_031481,NM_001039366	chr22,chr22	+,-	SLC25A18,ATP6V1E1	14,68045
chr6:46787606-46788421	chr6	+	46787605	46788474	True	NM_001168357,NM_005588	chr6,chr6	-,+	PLA2G7,MEP1A	-84175,-26562
chr4:157992732-157993680	chr4	+	157992732	157993602	True	NM_000824,NR_036641,NM_001166060,NM_001166061	chr4,chr4,chr4,chr4	+,-,+,+	GLRB,PDGFC,GLRB,GLRB	3674,-100186,3952,3674
chr14:103523320-103523537	chr14	+	103523338	103523450	True	NM_001077594,NM_006035	chr14,chr14	+,-	EXOC3L4,CDC42BPB	43030,342
chr17:76166358-76166890	chr17	+	76166412	76166938	True	NM_003258,NM_004710	chr17,chr17	-,+	TK1,SYNGR2	16397,-1792
chr6:167793648-167794148	chr6	+	167793774	167794167	True	NM_004610,NM_031949	chr6,chr6	-,+	TCP10,TTLL2	3881,-55251
chr6:167793648-167794148	chr6	-	167587897	167588290	False	NM_005299,NM_001145121	chr6,chr6	-,+	GPR31,TCP10L2	-16578,-3867
chrX:16964813-16965051	chrX	+	16964887	16965099	True	NM_004726,NM_002893,NM_001080975	chrX,chrX,chrX	+,-,+	REPS2,RBBP7,REPS2	-124,-76353,-124
chr4:103417336-103417961	chr4	+	103417336	103418008	True	NM_003998,NM_001165412,NM_001135146	chr4,chr4,chr4	+,+,-	NFKB1,NFKB1,SLC39A8	4477,4477,-150681
chr21:33091185-33091457	chr21	+	33091185	33091327	True	NM_000454,NM_001145444	chr21,chr21	+,-	SOD1,SCAF4	-59303,13160
chr10:135158968-135159654	chr10	+	135159148	135159656	True	NM_001145201,NM_015722,NM_145202	chr10,chr10,chr10	+,-,+	PRAP1,CALY,PRAP1	1187,-8673,1187
chr20:45338646-45339749	chr20	+	45338703	45339488	True	NM_030777,NM_033550	chr20,chr20	+,-	SLC2A10,TP53RK	-475,-20427
chr21:41033135-41033391	chr21	+	41033137	41033389	True	NR_026543,NM_006057,NM_033171,NM_033170,NM_033173,NM_033172	chr21,chr21,chr21,chr21,chr21,chr21	-,+,+,+,+,+	C21orf88,B3GALT5,B3GALT5,B3GALT5,B3GALT5,B3GALT5	-48388,-3934,-3934,-3934,-3934,-3934
chr9:140333119-140333856	chr9	+	140333528	140333844	True	NM_001033113,NM_006647,NM_198585	chr9,chr9,chr9	-,+,-	ENTPD8,NOXA1,ENTPD8	2107,-15732,2107
chr5:156592867-156594159	chr5	+	156592878	156593870	True	NM_130899,NM_005546	chr5,chr5	-,+	FAM71B,ITK	173,14036
chr12:75784919-75785136	chr12	+	75785005	75785161	True	NM_152436,NM_032606	chr12,chr12	+,-	GLIPR1L2,CAPS2	-167,-61169
chr7:16788543-16788831	chr7	+	16788605	16788843	True	NM_006408,NM_014399	chr7,chr7	-,+	AGR2,TSPAN13	55945,4507
chr7:107800923-107801644	chr7	+	107800926	107801689	True	NM_007356,NM_000108	chr7,chr7	-,+	LAMB4,DLD	-30125,-269391
chr7:7569138-7569794	chr7	+	7569185	7569808	True	NM_001037763,NM_019005	chr7,chr7	-,+	COL28A1,MIOS	5708,36807
chr4:152152024-152153258	chr4	+	152152069	152152953	True	NM_001128923,NM_001009555,NM_183375	chr4,chr4,chr4	-,-,+	SH3D19,SH3D19,PRSS48	-4409,-4409,45371
chr6:108146174-108146501	chr6	+	108146213	108146543	True	NM_018013,NM_198081	chr6,chr6	+,-	SOBP,SCML4	-334947,-692
chr1:151482832-151483093	chr1	+	151482868	151483072	True	NM_145796,NM_020770	chr1,chr1	-,+	POGZ,CGN	-50927,789
chr11:62495114-62495342	chr11	+	62495139	62495377	True	NM_001079559,NR_037946,NM_173810	chr11,chr11,chr11	-,-,+	HNRNPUL2,HNRNPUL2-BSCL2,TTC9C	-282,-283,574
chr5:10572294-10572671	chr5	+	10572311	10572655	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-7934,188782
chr1:7843095-7843432	chr1	+	7843382	7843442	True	NM_006786,NM_016831	chr1,chr1	-,+	UTS2,PER3	69712,1320
chrX:107334567-107334801	chrX	+	107334586	107334848	True	NM_052936,NM_178270,NM_002814,NM_170750	chrX,chrX,chrX,chrX	+,+,-,-	ATG4A,ATG4A,PSMD10,PSMD10	50,50,76,76
chr9:2288761-2289279	chr9	+	2288761	2289324	True	NM_139045,NR_015375	chr9,chr9	+,-	SMARCA2,FLJ35024	-273470,333099
chr19:48899622-48901606	chr19	+	48900068	48901583	True	NM_000836,NM_006801	chr19,chr19	+,-	GRIN2D,KDELR1	-1987,-5258
chr2:37579095-37580045	chr2	+	37579409	37580053	True	NM_012413,NM_005813	chr2,chr2	+,-	QPCT,PRKD3	-7712,-35187
chr20:36529993-36530278	chr20	+	36530061	36530275	True	NM_080607,NM_014657	chr20,chr20	+,-	VSTM2L,TTI1	1223,131608
chr1:200707126-200707892	chr1	+	200707200	200707876	True	NM_203459,NM_001031725	chr1,chr1	+,-	CAMSAP1L1,DDX59	809,-68074
chr4:88315457-88316266	chr4	+	88315637	88316134	True	NM_024047,NM_016245	chr4,chr4	+,-	NUDT9,HSD17B11	27600,-3182
chr7:98868103-98868544	chr7	+	98868520	98868582	True	NM_001145715,NR_002147	chr7,chr7	-,+	KPNA7,MYH16	-63431,2341
chr14:97301753-97303023	chr14	+	97301890	97302753	True	NM_003384,NM_018036	chr14,chr14	+,-	VRK1,ATG2B	-38257,-472212
chr1:2519918-2520248	chr1	+	2519936	2520132	True	NR_036637,NM_001195741,NM_001195740,NR_037844,NR_036638,NM_001195738,NM_152371,NM_001195736,NM_001195737	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,-,+,+,+,+,+	C1orf93,C1orf93,C1orf93,LOC100133445,C1orf93,C1orf93,C1orf93,C1orf93,C1orf93	-2088,-1798,-1798,-31486,-2088,-1798,-1798,-1798,-1798
chr12:108297705-108298170	chr12	+	108297751	108298023	True	NR_037629,NM_203436	chr12,chr12	-,+	LOC728739,ASCL4	-203,-129640
chr22:18594190-18594681	chr22	+	18594202	18594582	True	NM_001136004,NM_001193414,NM_018943	chr22,chr22,chr22	-,+,+	MICAL3,TUBA8,TUBA8	-86877,-800,-800
chr1:187071908-187073855	chr1	+	187072068	187073642	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-422509,-274095
chr9:139887131-139887417	chr9	+	139887134	139887416	True	NM_183241,NM_004669,NM_207510	chr9,chr9,chr9	+,-,+	C9orf142,CLIC3,LCNL1	-315,3658,-9740
chr5:167912629-167913424	chr5	+	167912654	167913290	True	NM_002887,NR_029520	chr5,chr5	+,-	RARS,MIR103-1	172,74738
chr17:7349127-7349951	chr17	+	7349171	7349917	True	NM_004112,NM_001128833,NM_000747	chr17,chr17,chr17	+,-,+	FGF11,ZBTB4,CHRNB1	-6533,33078,-816
chr10:75187381-75188024	chr10	+	75187401	75187901	True	NM_001024593,NM_173348	chr10,chr10	-,+	ZMYND17,FAM149B1	5468,-259575
chr6:45930061-45930898	chr6	+	45930233	45930683	True	NM_016929,NM_014936	chr6,chr6	-,+	CLIC5,ENPP4	52964,167017
chr7:100493662-100493940	chr7	+	100493687	100493927	True	NM_000665,NM_015908,NM_015831,NM_001015072	chr7,chr7,chr7,chr7	-,+,-,-	ACHE,SRRT,ACHE,UFSP1	-146,-21037,-146,-6348
chr2:215671520-215672108	chr2	+	215671662	215672069	True	NM_000465,NM_001080500	chr2,chr2	-,+	BARD1,VWC2L	2411,-395261
chr12:12764807-12765034	chr12	+	12764806	12765012	True	NM_001310,NM_030640	chr12,chr12	+,-	CREBL2,DUSP16	-26,-49358
chr16:399958-401181	chr16	+	400159	401198	True	NM_181050,NM_003502,NR_024453	chr16,chr16,chr16	-,-,+	AXIN1,AXIN1,LOC100134368	1528,1528,31042
chr1:151043712-151044036	chr1	+	151043759	151043907	True	NM_144618,NM_020239	chr1,chr1	+,-	GABPB2,CDC42SE1	-737,-11634
chr9:34991436-34991918	chr9	+	34991448	34991961	True	NM_001135004,NM_001135005,NM_012266,NM_007126	chr9,chr9,chr9,chr9	+,+,+,-	DNAJB5,DNAJB5,DNAJB5,VCP	-1774,-1232,-1774,80828
chr4:109089395-109089712	chr4	+	109089466	109089643	True	NM_001130714,NM_001130713,NM_001166119,NR_029374,NM_016269,NR_029373	chr4,chr4,chr4,chr4,chr4,chr4	-,-,-,+,-,+	LEF1,LEF1,LEF1,LOC641518,LEF1,LOC641518	519,519,-1513,-836,519,3632
chr9:33605858-33607073	chr9	+	33606134	33606977	True	NR_023917,NR_003573	chr9,chr9	-,+	PTENP1,ANXA2P2	70500,17245
chr7:100470764-100472107	chr7	+	100470967	100472089	True	NM_001015072,NM_003302,NM_001128853,NM_001128852,NM_015908,NM_001128854	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,+,+	UFSP1,TRIP6,SRRT,SRRT,SRRT,SRRT	15300,-6068,611,611,611,611
chr7:70601227-70601629	chr7	+	70601234	70601450	True	NM_022479,NR_037477	chr7,chr7	+,-	WBSCR17,MIR3914-1	-3496,171356
chr15:84114532-84115466	chr15	+	84114691	84115499	True	NM_003027,NM_001717,NR_026799	chr15,chr15,chr15	+,-,+	SH3GL3,BNC1,SH3GL3	591,-161223,591
chr1:115325971-115326491	chr1	+	115326052	115326301	True	NM_003176,NM_025073,NM_001102396	chr1,chr1,chr1	+,-,-	SYCP1,SIKE1,SIKE1	71153,-2744,-2744
chr19:45419316-45421085	chr19	+	45419519	45420960	True	NM_145288,NM_001645,NR_028413,NR_028412,NR_028414	chr19,chr19,chr19,chr19,chr19	-,+,+,+,+	ZNF296,APOC1,APOC1P1,APOC1P1,APOC1P1	158778,-1649,9099,9099,9099
chr12:104323583-104323800	chr12	+	104323650	104323800	True	NM_003299,NR_037425,NR_027249	chr12,chr12,chr12	+,+,-	HSP90B1,MIR3652,GNN	388,402,239
chr19:55478159-55478528	chr19	+	55478388	55478577	True	NM_001174083,NM_001174082,NM_017852,NM_001174081,NM_206828	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	NLRP2,NLRP2,NLRP2,NLRP2,NLRP7	-735,-735,-735,-1794,-19515
chr6:90529193-90529463	chr6	+	90529204	90529452	True	NM_001137667,NM_014611	chr6,chr6	+,-	CASP8AP2,MDN1	10166,40
chr5:76744615-76745434	chr5	+	76744844	76745444	True	NM_003719,NM_018268	chr5,chr5	+,-	PDE8B,WDR41	-238189,42938
chr17:20060442-20061139	chr17	+	20060453	20061157	True	NM_007202,NM_001033555,NM_001033554	chr17,chr17,chr17	-,+,+	AKAP10,SPECC1,SPECC1	-179324,-1102,-1102
chr20:60962743-60963222	chr20	+	60962755	60963045	True	NM_001024,NM_031215	chr20,chr20	+,-	RPS21,CABLES2	-685,19344
chr6:26122578-26123168	chr6	+	26122618	26123120	True	NM_003526,NM_003512	chr6,chr6	-,+	HIST1H2BC,HIST1H2AC	1062,1252
chr16:4467152-4468065	chr16	+	4467617	4468071	True	NM_005147,NM_001135110,NM_024535,NM_001201473,NM_001201472,NM_001201479	chr16,chr16,chr16,chr16,chr16,chr16	+,+,-,-,-,-	DNAJA3,DNAJA3,CORO7,CORO7,CORO7,CORO7-PAM16	7786,7786,-655,-655,-655,-655
chr4:103991891-103992827	chr4	+	103991890	103992274	True	NM_001008388,NM_178833	chr4,chr4	+,-	CISD2,NHEDC2	-201808,5947
chr1:21607196-21607401	chr1	+	21607253	21607369	True	NM_001113347,NM_032264,NM_001113349,NM_001397	chr1,chr1,chr1,chr1	-,+,-,-	ECE1,NBPF3,ECE1,ECE1	-1070,159261,9447,9663
chr4:184406624-184407972	chr4	+	184406841	184407791	True	NR_033995,NM_001564	chr4,chr4	-,+	LOC389247,ING2	17936,18428
chr11:392892-393568	chr11	+	393017	393514	True	NM_007183,NM_001135054	chr11,chr11	+,-	PKP3,SIGIRR	702,21535
chr8:7713041-7713723	chr8	+	7713130	7713599	True	NM_152250,NM_001081552,NM_058203	chr8,chr8,chr8	-,+,+	DEFB105A,SPAG11A,SPAG11B	-31770,-7779,-7779
chr8:7713041-7713723	chr8	-	7312991	7313460	False	NM_001040703,NM_016512,NM_058206,NM_058207,NM_058200,NM_058201,NM_058202,NM_058203	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	+,-,-,-,-,-,-,-	DEFB105B,SPAG11B,SPAG11B,SPAG11B,SPAG11B,SPAG11B,SPAG11B,SPAG11B	31782,7782,-3104,-3104,7782,7782,7782,7782
chr20:29843852-29845318	chr20	+	29844068	29845338	True	NM_001037731,NM_001037730	chr20,chr20	-,+	DEFB116,DEFB115	51100,128
chr7:99039025-99039999	chr7	+	99039080	99039957	True	NM_015545,NM_006693,NM_001081559	chr7,chr7,chr7	-,+,+	PTCD1,CPSF4,CPSF4	-2618,-2568,-2568
chr19:9468868-9469550	chr19	+	9468871	9469579	True	NM_198535,NM_003451	chr19,chr19	-,+	ZNF699,ZNF177	-53076,4116
chr1:180981969-180983253	chr1	+	180982165	180983164	True	NM_001194999,NM_005819	chr1,chr1	+,-	MR1,STX6	19396,8932
chr20:32948722-32950071	chr20	+	32949809	32950111	True	NM_031483,NM_001161766	chr20,chr20	+,-	ITCH,AHCY	950,-50201
chr19:54465278-54466238	chr19	+	54465288	54466199	True	NM_198481,NM_031895	chr19,chr19	-,+	VSTM1,CACNG8	101058,90
chr15:40986952-40987181	chr15	+	40986955	40987230	True	NM_133487,NM_018145,NM_001164269,NM_001164270,NM_002875	chr15,chr15,chr15,chr15,chr15	+,-,+,+,+	RAD51,FAM82A2,RAD51,RAD51,RAD51	96,60278,147,96,96
chr1:104238662-104239604	chr1	+	104238817	104239583	True	NM_004038,NM_001008221,NM_001008218,NM_001008219	chr1,chr1,chr1,chr1	-,-,-,-	AMY1A,AMY1A,AMY1B,AMY1C	-35,66,-58,-36
chr1:104238662-104239604	chr1	-	104197630	104198396	False	NM_001008221,NM_004038,NM_001008218,NM_001008219	chr1,chr1,chr1,chr1	+,+,+,+	AMY1A,AMY1A,AMY1B,AMY1C	-66,35,58,36
chr1:104238662-104239604	chr1	-	104291768	104292534	False	NM_001008221,NM_004038,NM_001008218,NM_001008219	chr1,chr1,chr1,chr1	+,+,+,+	AMY1A,AMY1A,AMY1B,AMY1C	-66,35,58,36
chr9:19129217-19129740	chr9	+	19129417	19129790	True	NM_001122,NR_038064,NM_006570	chr9,chr9,chr9	-,-,+	PLIN2,PLIN2,RRAGA	-1813,-1813,-80108
chr1:224517910-224518128	chr1	+	224517945	224518147	True	NM_002533,NM_206840,NM_014184	chr1,chr1,chr1	-,-,+	NVL,NVL,CNIH4	-73,-73,26447
chr8:22854269-22854472	chr8	+	22854287	22854423	True	NM_015178,NM_001160037,NM_001160036,NM_144962	chr8,chr8,chr8,chr8	+,+,+,-	RHOBTB2,RHOBTB2,RHOBTB2,PEBP4	2668,-977,-9408,-68866
chr17:21156921-21157975	chr17	+	21157083	21157794	True	NM_152914,NM_145109	chr17,chr17	-,+	C17orf103,MAP2K3	-505,30173
chr3:40636308-40637457	chr3	+	40636416	40637468	True	NR_033965,NM_198484	chr3,chr3	-,+	FLJ33065,ZNF621	-285227,-70096
chr17:7746538-7746962	chr17	+	7746605	7746889	True	NM_032356,NM_001080424	chr17,chr17	-,+	LSMD1,KDM6B	14333,-3421
chr19:36544379-36545145	chr19	+	36544540	36544876	True	NM_001083961,NM_152658,NM_173636	chr19,chr19,chr19	+,-,+	WDR62,THAP8,WDR62	906,838,906
chr2:27446271-27447260	chr2	+	27446549	27447231	True	NM_004341,NR_028323	chr2,chr2	+,-	CAD,SLC5A6	-6342,-11374
chr14:35186298-35187706	chr14	+	35186740	35187702	True	NR_002937,NM_021914,NM_138638,NR_028130,NR_028131,NR_028132	chr14,chr14,chr14,chr14,chr14,chr14	+,-,-,-,-,-	C14orf19,CFL2,CFL2,CFL2,CFL2,CFL2	221425,-3717,-2711,-2711,-2711,-2979
chr9:92254323-92254542	chr9	+	92254333	92254543	True	NR_024280,NM_006378	chr9,chr9	+,-	LOC100129066,SEMA4D	154,-159722
chr13:26624810-26625180	chr13	+	26624816	26625178	True	NM_001260,NM_001007538	chr13,chr13	+,-	CDK8,SHISA2	203577,70
chr2:224700887-224701089	chr2	+	224700900	224701080	True	NM_022915,NM_001039569	chr2,chr2	+,-	MRPL44,AP1S3	121040,1289
chrX:37344881-37346553	chrX	+	37345046	37346148	True	NM_001170331,NM_006520	chrX,chrX	+,-	LANCL3,DYNLT3	84673,360801
chr19:36025149-36025441	chr19	+	36025244	36025404	True	NM_001166035,NM_001166034,NM_014364,NM_198538	chr19,chr19,chr19,chr19	-,-,+,-	SBSN,SBSN,GAPDHS,SBSN	-5991,-5991,-981,-5991
chr3:125521933-125523739	chr3	+	125522048	125523759	True	NR_024250,NR_031687	chr3,chr3	+,-	LOC100125556,MIR548I1	111684,-12653
chr11:575564-575769	chr11	+	575609	575805	True	NR_029623,NM_020901,NR_026967	chr11,chr11,chr11	-,+,-	MIR210,PHRF1,LOC143666	-7411,677,130
chr2:131439508-131440640	chr2	+	131439696	131440576	True	NR_023391,NM_001079530	chr2,chr2	+,-	C2orf14,CFC1B	-2124,-82445
chr2:131439508-131440640	chr2	+	132046404	132047274	False	NR_030728,NM_001077637	chr2,chr2	+,-	LOC440910,LOC150786	-9592,74507
chr2:131439508-131440640	chr2	-	130806065	130806115	False	NR_026758,NM_032144	chr2,chr2	-,+	LOC440905,RAB6C	2639,-68881
chr2:131439508-131440640	chr2	-	131196084	131196974	False	NM_032357,NM_001079530	chr2,chr2	-,+	CCDC115,CFC1B	-96162,81692
chr22:25960372-25960657	chr22	+	25960382	25960692	True	NM_001135772,NM_005160	chr22,chr22	-,+	LRP5L,ADRBK2	-182838,168
chr9:27285433-27286477	chr9	+	27285598	27286506	True	NR_026679,NR_026687,NM_000459	chr9,chr9,chr9	-,-,+	NCRNA00032,NCRNA00032,TEK	-2807,-2807,-176510
chr2:31620545-31621484	chr2	+	31620656	31621514	True	NM_014600,NM_000379	chr2,chr2	+,-	EHD3,XDH	-163827,16147
chr16:31224347-31225263	chr16	+	31224469	31224983	True	NM_001008274,NM_152901	chr16,chr16	+,-	TRIM72,PYDC1	358,3462
chr6:139457396-139457862	chr6	+	139457475	139457768	True	NM_016217,NM_031922	chr6,chr6	+,-	HECA,REPS1	-1277,-148077
chr10:18241507-18242213	chr10	+	18241819	18242250	True	NM_001145195,NM_014241,NM_152725	chr10,chr10,chr10	+,-,+	SLC39A12,PTPLA,SLC39A12	-1103,-582446,-1103
chr20:47807655-47808307	chr20	+	47807854	47808245	True	NM_017454,NM_017895,NM_017452,NM_017453,NM_004602,NM_001037328	chr20,chr20,chr20,chr20,chr20,chr20	-,+,-,-,-,-	STAU1,DDX27,STAU1,STAU1,STAU1,STAU1	-2950,27586,-2950,-2950,-2950,-2950
chr11:45825133-45825516	chr11	+	45825274	45825514	True	NM_018389,NM_001145266,NM_001145265,NM_001080446	chr11,chr11,chr11,chr11	+,+,+,-	SLC35C1,SLC35C1,SLC35C1,C11orf94	1126,108,108,103369
chr16:30253069-30254032	chr16	+	30253274	30253458	True	NR_002555,NM_177552	chr16,chr16	-,+	LOC613037,SULT1A3	3524,-42776
chr16:30253069-30254032	chr16	+	29513305	29513489	False	NR_002557,NM_177552	chr16,chr16	-,+	LOC613038,SULT1A3	-34406,-42149
chr16:30253069-30254032	chr16	-	22528565	22528749	False	NM_001135865,NR_027460	chr16,chr16	+,-	LOC100132247,RRN3P3	-3772,-79529
chr16:30253069-30254032	chr16	+	21432800	21432984	False	NR_026675,NM_130464	chr16,chr16	+,-	NCRNA00169,NPIPL3	-120681,3724
chr16:30253069-30254032	chr16	+	21865078	21865262	False	NM_003366,NR_003370	chr16,chr16	+,-	UQCRC2,RRN3P1	99346,-34583
chr8:124193345-124193815	chr8	+	124193500	124193864	True	NM_032899,NR_024479,NM_207006	chr8,chr8,chr8	+,-,+	FAM83A,LOC100131726,FAM83A	887,21169,887
chr18:75696340-75697374	chr18	+	75696556	75697391	True	NM_001480,NM_001025100	chr18,chr18	+,-	GALR1,MBP	-734606,-851782
chr1:233749933-233750156	chr1	+	233749992	233750138	True	NM_002245,NM_014801	chr1,chr1	+,-	KCNK1,PCNXL2	-293,-318533
chr11:73309676-73309890	chr11	+	73309710	73309932	True	NM_001130033,NM_015159	chr11,chr11	+,-	PLEKHB1,FAM168A	47290,-482
chr19:39388520-39389252	chr19	+	39388681	39389274	True	NM_002503,NM_030593,NM_001001716,NM_012237,NR_034146,NM_001193286	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,-,-,-	NFKBIB,SIRT2,NFKBIB,SIRT2,SIRT2,SIRT2	1340,1279,1340,1240,-3886,1279
chr7:69062582-69062851	chr7	+	69062593	69062817	True	NM_001127231,NM_001127232,NM_015570,NR_037477	chr7,chr7,chr7,chr7	+,+,+,-	AUTS2,AUTS2,AUTS2,MIR3914-1	1087,1088,1088,1709989
chr1:92415725-92416436	chr1	+	92416019	92416311	True	NM_207189,NM_001195684,NM_001726	chr1,chr1,chr1	+,-,+	BRDT,TGFBR3,BRDT	-1142,-44460,1397
chr17:47653120-47653472	chr17	+	47653178	47653514	True	NM_001007226,NM_007225	chr17,chr17	-,+	SPOP,NXPH3	102061,27
chr7:45065426-45065885	chr7	+	45065468	45065921	True	NR_003697,NM_001029835	chr7,chr7	-,+	C7orf40,CCM2	-39209,1311
chrX:153689407-153689774	chrX	+	153689506	153689658	True	NM_017514,NM_006014	chrX,chrX	+,-	PLXNA3,LAGE3	-2934,17988
chr2:74741292-74741561	chr2	+	74741304	74741400	True	NM_016170,NM_032673	chr2,chr2	+,-	TLX2,PCGF1	195,-6483
chr19:494572-495169	chr19	+	494717	495153	True	NM_130762,NM_182577,NM_130760	chr19,chr19,chr19	+,-,+	MADCAM1,ODF3L2,MADCAM1	1336,-19734,1336
chr7:154793493-154794049	chr7	+	154793528	154793968	True	NR_028090,NM_007349	chr7,chr7	+,-	LOC202781,PAXIP1	1174,768
chr12:120315013-120315591	chr12	+	120315136	120315602	True	NM_207311,NM_007174	chr12,chr12	+,-	CCDC64,CIT	112045,-44
chrX:51544771-51546019	chrX	+	51545186	51546058	True	NM_001005332,NR_033773	chrX,chrX	+,-	MAGED1,LOC441495	96,-119739
chr7:1126985-1127782	chr7	+	1127127	1127622	True	NM_001098201,NM_001134395,NM_001505,NM_001039966	chr7,chr7,chr7,chr7	+,-,+,+	GPER,C7orf50,GPER,GPER	100,50328,-735,-735
chr16:84854290-84854835	chr16	+	84854390	84854718	True	NM_001145548,NM_031476	chr16,chr16	-,+	ZDHHC7,CRISPLD2	190473,-854
chr3:47206839-47208498	chr3	+	47207560	47208395	True	NR_033373,NM_014159	chr3,chr3	+,-	FLJ39534,SETD2	-1752,-2093
chr1:1241788-1242362	chr1	+	1242152	1242254	True	NM_030649,NM_153339	chr1,chr1	-,+	ACAP3,PUSL1	1065,1739
chr14:24641436-24641795	chr14	+	24641483	24641807	True	NM_001048205,NM_024658,NM_005132	chr14,chr14,chr14	+,-,+	REC8,IPO4,REC8	-300,16367,-300
chr21:44494326-44494770	chr21	+	44494337	44494622	True	NM_000394,NM_000071,NM_001178009,NM_001178008	chr21,chr21,chr21,chr21	+,-,-,-	CRYAA,CBS,CBS,CBS	94518,1469,1901,1901
chr1:12566799-12567121	chr1	+	12566878	12567060	True	NR_003025,NM_004753,NR_003022	chr1,chr1,chr1	+,-,+	SNORA59A,DHRS3,SNORA59B	239,110810,239
chr17:1090546-1090867	chr17	+	1090565	1090905	True	NM_001164405,NM_021962,NM_001159746	chr17,chr17,chr17	+,-,-	BHLHA9,ABR,ABR	82952,-7434,51
chr6:83901012-83901427	chr6	+	83901026	83901391	True	NM_001199917,NM_001199918,NM_001199919,NM_015599,NM_033411	chr6,chr6,chr6,chr6,chr6	-,-,-,-,+	PGM3,PGM3,PGM3,PGM3,RWDD2A	2323,1680,1680,1680,1640
chr11:46788863-46790560	chr11	+	46788924	46790076	True	NM_000506,NR_003056	chr11,chr11	+,-	F2,SNORD67	-48234,-4875
chr5:150155174-150155622	chr5	+	150155260	150155623	True	NM_032947,NM_016221	chr5,chr5	+,-	C5orf62,DCTN4	1884,-16603
chr18:67068776-67069030	chr18	+	67068824	67069006	True	NM_152721,NM_006566	chr18,chr18	+,-	DOK6,CD226	-591,555276
chr10:94431192-94432738	chr10	+	94431394	94432531	True	NM_002729,NM_004969	chr10,chr10	+,-	HHEX,IDE	17149,-97542
chr2:159313595-159313824	chr2	+	159313683	159313777	True	NM_001171637,NM_003628,NM_001005476,NM_138803	chr2,chr2,chr2,chr2	-,+,+,-	CCDC148,PKP4,PKP4,CCDC148	-418,-258,-258,-418
chr2:228674857-228675593	chr2	+	228674952	228675344	True	NM_004591,NM_001130046,NM_025243	chr2,chr2,chr2	+,+,-	CCL20,CCL20,SLC19A3	3213,3213,-92207
chr11:77730749-77732266	chr11	+	77730756	77731846	True	NM_023930,NM_003251	chr11,chr11	-,+	KCTD14,THRSP	2524,43060
chr11:45901886-45902550	chr11	+	45901947	45902579	True	NM_005456,NM_001080446	chr11,chr11	+,-	MAPK8IP1,C11orf94	4622,26304
chr11:88952750-88953779	chr11	+	88952853	88953733	True	NM_000842,NM_000372	chr11,chr11	-,+	GRM5,TYR	-156037,-41872
chr21:30360503-30362191	chr21	+	30360840	30361936	True	NM_015565,NM_001001992	chr21,chr21	-,+	LTN1,USP16	3393,35001
chr1:150523899-150524402	chr1	+	150523980	150524436	True	NM_019032,NM_001197320,NM_025008,NR_036211	chr1,chr1,chr1,chr1	+,-,+,+	ADAMTSL4,MCL1,ADAMTSL4,MIR4257	-2133,27828,-2133,-24
chr15:54051329-54051679	chr15	+	54051328	54051643	True	NM_182758,NM_001080534	chr15,chr15	-,+	WDR72,UNC13C	266,253457
chr20:48424774-48425380	chr20	+	48424949	48425176	True	NM_004776,NM_015266	chr20,chr20	-,+	B4GALT5,SLC9A8	-94528,4073
chr16:4610494-4611491	chr16	+	4610601	4611511	True	NM_001145011,NM_013399	chr16,chr16	+,-	LOC342346,C16orf5	-4171,-21785
chr8:12052520-12054464	chr8	+	12052744	12053770	True	NM_001083537,NR_003494,NR_027425	chr8,chr8,chr8	-,-,+	FAM86B1,FAM86B1,FAM66D	-1120,-1120,-79512
chr8:12052520-12054464	chr8	+	12295963	12296043	False	NR_026789,NM_001137610	chr8,chr8	+,-	FAM66A,FAM86B2	-76486,-2111
chr12:65005762-65006549	chr12	+	65005808	65006203	True	NR_037515,NM_178169	chr12,chr12	-,+	MIR548Z,RASSF3	10239,-1566
chr20:1973228-1974644	chr20	+	1973397	1974453	True	NM_001190900,NM_001190892,NM_001040023,NM_024411,NM_001190898,NM_001190899	chr20,chr20,chr20,chr20,chr20,chr20	-,-,+,-,-,-	PDYN,PDYN,SIRPA,PDYN,PDYN,PDYN	-3,55,-97622,534,534,534
chr3:184428701-184429263	chr3	+	184428893	184429300	True	NM_001009921,NM_022149	chr3,chr3	+,-	VPS8,MAGEF1	100630,587
chr6:14957742-14958707	chr6	+	14957768	14958292	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	288234,705056
chr17:41438492-41439433	chr17	+	41438496	41439304	True	NR_027412,NM_001661	chr17,chr17	-,+	LOC100130581,ARL4D	27012,37048
chr4:160201364-160202234	chr4	+	160201364	160202126	True	NR_037459,NM_014247	chr4,chr4	-,+	MIR3688,RAPGEF2	-151318,-12417
chr3:187576059-187577090	chr3	+	187576091	187577117	True	NR_034062,NM_001706	chr3,chr3	+,-	LOC100131635,BCL6	-156001,-112578
chr2:220016544-220017482	chr2	+	220016732	220017100	True	NM_024782,NM_024293	chr2,chr2	-,+	NHEJ1,FAM134A	8537,25838
chr1:43748602-43750021	chr1	+	43749044	43749976	True	NM_182517,NM_001164829,NM_144626	chr1,chr1,chr1	-,-,+	C1orf210,C1orf210,TMEM125	1324,1362,-13430
chr5:169659861-169660132	chr5	+	169660006	169660082	True	NM_001102609,NM_005565	chr5,chr5	+,-	C5orf58,LCP2	-107,64790
chr3:150999942-151000298	chr3	+	150999955	151000310	True	NM_053002,NM_014879	chr3,chr3	+,-	MED12L,P2RY14	-195330,-3725
chr20:37058118-37058494	chr20	+	37058241	37058531	True	NR_015366,NR_027241,NR_002911,NR_003239,NR_003017,NR_002910,NR_003018	chr20,chr20,chr20,chr20,chr20,chr20,chr20	-,-,-,+,-,-,-	LOC388796,LOC388796,SNORA71A,SNHG11,SNORA71C,SNORA71B,SNORA71D	5481,5537,-2155,16765,-34,-4263,4161
chr5:78908579-78910219	chr5	+	78908657	78910272	True	NM_001114393,NM_004272,NM_001114394,NM_173797	chr5,chr5,chr5,chr5	+,-,+,+	PAPD4,HOMER1,PAPD4,PAPD4	-465,-98957,-465,-465
chr1:1708134-1709169	chr1	+	1708538	1709194	True	NM_001198993,NR_002946,NM_001198994,NM_023018	chr1,chr1,chr1,chr1	-,+,-,-	NADK,MMP23A,NADK,NADK	1153,-77214,2364,765
chr5:110579436-110579689	chr5	+	110579505	110579730	True	NM_001744,NM_139164	chr5,chr5	+,-	CAMK4,STARD4	-19616,268477
chr11:111959661-111960991	chr11	+	111959716	111960780	True	NM_003002,NR_028383,NM_012459	chr11,chr11,chr11	+,-,-	SDHD,TIMM8B,TIMM8B	-2209,-2194,-2194
chr11:119058444-119058821	chr11	+	119058482	119058863	True	NM_001168468,NM_024791,NM_001145018,NR_033122	chr11,chr11,chr11,chr11	+,+,-,+	PDZD3,PDZD3,CCDC153,PDZD3	-2367,-2367,7771,-2367
chr10:48019337-48020453	chr10	+	48019345	48020473	True	NM_018232,NM_002900	chr10,chr10	+,-	FAM21B,RBP3	-125373,370576
chr10:48019337-48020453	chr10	+	51964637	51965765	False	NM_018232,NM_001143974	chr10,chr10	+,-	FAM21B,ASAH2	-126802,42663
chr10:119135530-119135747	chr10	+	119135594	119135782	True	NM_173791,NM_003054	chr10,chr10	-,+	PDZD8,SLC18A2	-657,-135061
chr16:79875401-79876879	chr16	+	79875614	79876870	True	NM_005360,NM_130897	chr16,chr16	-,+	MAF,DYNLRB2	-240992,697983
chrX:48396653-48397868	chrX	+	48396662	48397886	True	NM_033518,NM_002536	chrX,chrX	-,+	SLC38A5,TBC1D25	-68018,188
chr7:121784447-121784660	chr7	+	121784492	121784696	True	NM_005763,NR_036484	chr7,chr7	-,+	AASS,LOC154860	-148,159015
chr6:80659694-80661603	chr6	+	80659796	80661628	True	NM_001166691,NM_022726	chr6,chr6	+,-	TTK,ELOVL4	52693,-2481
chr18:72057423-72057769	chr18	+	72057430	72057794	True	NM_001044369,NM_001174123	chr18,chr18	-,+	FAM69C,DKFZP781G0119	66759,-74371
chr12:58175001-58176458	chr12	+	58175369	58176446	True	NM_005371,NM_023033,NM_015433,NM_001172695,NM_001172696,NM_001172697,NM_206914,NM_005726	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,-,+,+,+,+,+,+	METTL1,METTL1,METTL21B,TSFM,TSFM,TSFM,METTL21B,TSFM	-9455,-9455,-9045,81,81,81,-9045,81
chr2:17936328-17937986	chr2	+	17936393	17937518	True	NM_024624,NM_001130009,NM_001142286,NM_182625	chr2,chr2,chr2,chr2	-,+,-,+	SMC6,GEN1,SMC6,GEN1	-1297,-1040,-1297,-1277
chr19:4337649-4338648	chr19	+	4338027	4338493	True	NM_001159846,NM_001013841,NM_032868,NM_017720	chr19,chr19,chr19,chr19	+,-,+,-	MPND,STAP2,MPND,STAP2	5030,404,5030,404
chr9:41952561-41954373	chr9	+	41952598	41954276	True	NR_015363,NM_001012421	chr9,chr9	-,+	MGC21881,ANKRD20A2	850,414026
chr9:41952561-41954373	chr9	-	66554030	66554086	False	NR_024443,NR_024496	chr9,chr9	-,+	LOC100133920,LOC442421	476946,-59812
chr9:41952561-41954373	chr9	-	42021343	42021393	False	NR_003670,NM_001012421	chr9,chr9	-,+	KGFLP2,ANKRD20A2	-1759,346909
chr9:41952561-41954373	chr9	+	46685648	46685698	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-3054918,1867
chrX:109247479-109248348	chrX	+	109247503	109248167	True	NM_032227,NM_017698,NR_004379	chrX,chrX,chrX	+,+,-	TMEM164,TMEM164,SNORD96B	-1212,-1691,220171
chr19:47423274-47423668	chr19	+	47423282	47423697	True	NM_021575,NM_004491	chr19,chr19	-,+	AP2S1,GRLF1	-69079,-1400
chr7:154862155-154862522	chr7	+	154862174	154862464	True	NM_007349,NM_024012	chr7,chr7	-,+	PAXIP1,HTR5A	-67492,81
chr1:157662168-157663833	chr1	+	157662363	157663294	True	NM_018240,NM_052939	chr1,chr1	+,-	KIRREL,FCRL3	299768,7417
chrX:75411212-75412785	chrX	+	75411459	75412798	True	NM_016500,NM_138703	chrX,chrX	+,-	CXorf26,MAGEE2	-18742,-406380
chr9:130328797-130329796	chr9	+	130328871	130329677	True	NM_022833,NM_001032221	chr9,chr9	-,+	FAM129B,STXBP1	1728,44808
chr11:57425248-57425697	chr11	+	57425273	57425731	True	NM_145008,NM_006831,NM_001142597,NM_015457	chr11,chr11,chr11,chr11	-,+,+,+	YPEL4,CLP1,CLP1,ZDHHC5	-7856,-108,-108,9742
chr13:39613366-39614247	chr13	+	39613372	39613850	True	NM_001012754,NM_025138,NM_170719,NM_001017370	chr13,chr13,chr13,chr13	+,-,-,+	NHLRC3,C13orf23,C13orf23,NHLRC3	-976,-1120,-1120,-976
chr11:8679227-8680037	chr11	+	8679303	8680085	True	NM_000990,NM_014818	chr11,chr11	+,-	RPL27A,TRIM66	23909,348
chr19:46525073-46525564	chr19	+	46525287	46525557	True	NR_030412,NM_005091	chr19,chr19	+,-	MIR769,PGLYRP1	-3148,1049
chr22:37400486-37401022	chr22	+	37400491	37400672	True	NM_001013436,NM_178552,NM_001163857	chr22,chr22,chr22	+,-,-	MPST,C22orf33,C22orf33	15029,3256,3256
chr7:73257460-73257802	chr7	+	73257674	73257790	True	NM_001305,NM_152559	chr7,chr7	+,-	CLDN4,WBSCR27	-12532,-819
chr9:131443460-131444486	chr9	+	131443825	131443977	True	NM_052844,NM_001122821,NM_003011	chr9,chr9,chr9	-,+,+	WDR34,SET,SET	-24696,1956,7531
chr17:45909064-45910973	chr17	+	45909501	45910646	True	NM_138355,NR_037575,NM_148887,NM_001145023,NM_033413,NM_145255	chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,+,-	SCRN2,MRPL10,MRPL10,SCRN2,LRRC46,MRPL10	8103,-594,-594,8103,-559,-594
chr8:145728628-145729322	chr8	+	145728728	145729138	True	NM_032902,NM_005309,NM_004260,NM_138431	chr8,chr8,chr8,chr8	+,+,-,+	PPP1R16A,GPT,RECQL4,MFSD3	-6670,326,14122,5413
chr12:123381601-123382377	chr12	+	123381624	123382422	True	NM_003959,NM_024667	chr12,chr12	+,-	HIP1R,VPS37B	-61643,-912
chr7:87257144-87257354	chr7	+	87257195	87257373	True	NM_000927,NM_001134406,NM_001134405,NM_138290	chr7,chr7,chr7,chr7	-,+,+,+	ABCB1,RUNDC3B,RUNDC3B,RUNDC3B	85316,355,355,355
chr6:126296814-126297645	chr6	+	126297064	126297379	True	NM_016063,NM_001031712	chr6,chr6	-,+	HDDC2,TRMT11	-673782,10196
chrX:70470676-70471507	chrX	+	70470681	70471342	True	NM_001171163,NM_005096,NM_000166,NM_201599,NM_001171162	chrX,chrX,chrX,chrX,chrX	-,-,+,-,-	ZMYM3,ZMYM3,GJB1,ZMYM3,ZMYM3	3207,3207,-27676,2746,3755
chr14:21026076-21027336	chr14	+	21026126	21026800	True	NM_001110361,NM_001001673,NM_001110360,NM_001110357,NM_001110356,NM_001110359,NM_001110358,NM_001012975	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	-,-,-,-,-,-,-,+	RNASE9,RNASE9,RNASE9,RNASE9,RNASE9,RNASE9,RNASE9,RNASE10	2340,2340,2340,2340,2340,2340,2340,-47546
chr1:28287044-28288010	chr1	+	28287047	28288010	True	NM_002946,NM_018053	chr1,chr1	-,+	RPA2,XKR8	-45811,-594
chr6:138504763-138505652	chr6	+	138504846	138505668	True	NM_021635,NM_020340	chr6,chr6	-,+	PBOV1,KIAA1244	34010,-21844
chr4:76915027-76916954	chr4	+	76915314	76916406	True	NM_018115,NM_001130017	chr4,chr4	-,+	SDAD1,ART3	-3201,15930
chr9:119461005-119461875	chr9	+	119461168	119461894	True	NM_012210,NM_001184735	chr9,chr9	+,-	TRIM32,ASTN2	-11638,-11626
chr19:49623724-49623949	chr19	+	49623852	49623998	True	NM_018111,NM_003660,NM_022165	chr19,chr19,chr19	-,+,+	C19orf73,PPFIA3,LIN7B	-1455,-1240,-6285
chr1:235530971-235531514	chr1	+	235530998	235531560	True	NM_001079515,NM_031371,NM_003193	chr1,chr1,chr1	+,-,+	TBCE,ARID4B,TBCE	-321,-39466,-321
chr1:43998612-43999306	chr1	+	43998643	43999155	True	NM_002840,NM_031207,NM_130440	chr1,chr1,chr1	+,-,+	PTPRF,HYI,PTPRF	-2147,-78983,-2147
chr18:23807119-23807545	chr18	+	23807275	23807599	True	NM_005640,NM_005637	chr18,chr18	+,-	TAF4B,SS18	-917,-136664
chr13:112724186-112725292	chr13	+	112724417	112725302	True	NM_006322,NM_005986	chr13,chr13	-,+	TUBGCP3,SOX1	517229,-2555
chr20:34025874-34027325	chr20	+	34025882	34027374	True	NM_007186,NM_000557	chr20,chr20	+,-	CEP250,GDF5	15848,25
chr1:11754145-11754442	chr1	+	11754155	11754349	True	NM_198545,NM_001127325	chr1,chr1	+,-	C1orf187,MAD2L2	-2425,-2477
chr16:46602765-46602998	chr16	+	46602823	46603043	True	NR_026556,NM_014321	chr16,chr16	-,+	ANKRD26P1,ORC6	16,120514
chr12:6379459-6380920	chr12	+	6379458	6380795	True	NM_018173,NM_001065	chr12,chr12	+,-	PLEKHG6,TNFRSF1A	38806,70539
chrX:119293088-119293942	chrX	+	119293133	119293715	True	NM_139282,NM_032498,NM_001099685	chrX,chrX,chrX	-,+,+	RHOXF1,RHOXF2,RHOXF2B	-43286,-717,-717
chrX:119293088-119293942	chrX	-	119210458	119211040	False	NM_032498,NM_001099685	chrX,chrX	-,-	RHOXF2,RHOXF2B	717,717
chr1:161007719-161008216	chr1	+	161007759	161008174	True	NM_001113206,NM_001113207,NM_007122,NR_033385,NM_207005,NM_001113205	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,-	TSTD1,TSTD1,USF1,KLHDC9,USF1,TSTD1	650,650,7633,59976,7633,650
chr12:50230749-50231161	chr12	+	50230750	50231032	True	NR_027500,NM_001037806,NM_181708,NR_027501,NR_027499	chr12,chr12,chr12,chr12,chr12	+,-,-,+,+	LOC100286844,NCKAP5L,BCDIN3D,LOC100286844,LOC100286844	-8488,-8542,5930,-8488,-8488
chr22:24821948-24823023	chr22	+	24821988	24822818	True	NR_028484,NM_000675	chr22,chr22	-,+	C22orf45,ADORA2A	68015,711
chr16:33138683-33139616	chr16	+	33138682	33139653	True	NR_033866,NM_016212	chr16,chr16	-,+	LOC390705,TP53TG3	159099,65326
chr16:33138683-33139616	chr16	+	32197705	32198672	False	NR_002827,NM_003414	chr16,chr16	-,+	HERC2P4,ZNF267	-33831,-312685
chr16:33138683-33139616	chr16	-	32753396	32754367	False	NM_016212	chr16	-	TP53TG3	-65343
chr1:78509775-78510050	chr1	+	78509774	78509936	True	NM_003902,NM_017655	chr1,chr1	-,+	FUBP1,GIPC2	-64997,1652
chr7:27213186-27213547	chr7	+	27213243	27213483	True	NM_018951,NR_037940,NR_037939,NR_029911,NM_153715,NR_002795,NM_152739	chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,+,-	HOXA10,HOXA10-HOXA9,HOXA10,MIR196B,HOXA10,HOXA11-AS1,HOXA9	522,6447,6447,-4061,6443,11543,-8094
chr19:8008570-8008770	chr19	+	8008571	8008745	True	NM_006351,NR_030717	chr19,chr19	-,+	TIMM44,SNAPC2	13,-22755
chr1:165408608-165410572	chr1	+	165408730	165410505	True	NM_006917,NR_033824,NM_001005214	chr1,chr1,chr1	-,-,+	RXRG,RXRG,LRRC52	4137,4137,102972
chr16:24738537-24740220	chr16	+	24738781	24740264	True	NM_001006634,NM_014494	chr16,chr16	-,+	ARHGAP17,TNRC6A	286468,784
chr22:24667525-24668112	chr22	+	24667568	24667978	True	NM_001145468,NM_015330,NM_004121	chr22,chr22,chr22	+,+,-	SPECC1L,SPECC1L,GGT5	-840,-840,-26458
chr22:44395123-44396376	chr22	+	44395192	44396284	True	NM_001003828,NM_138814	chr22,chr22	+,-	PARVB,PNPLA5	-78,-107299
chr7:30510661-30511467	chr7	+	30510680	30511505	True	NM_006092,NR_002186	chr7,chr7	-,+	NOD1,DKFZP586I1420	6938,-101065
chr12:54717060-54717691	chr12	+	54717143	54717352	True	NM_016057,NM_001136023	chr12,chr12	+,-	COPZ1,NFE2	1558,-22352
chr12:10362668-10363092	chr12	+	10362793	10362916	True	NM_031412,NM_002543	chr12,chr12	+,-	GABARAPL1,OLR1	2572,-38003
chr1:76260494-76261116	chr1	+	76260520	76260978	True	NM_004582,NR_003042,NM_080868,NR_002749,NR_002748,NM_002440	chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,+,+,+	RABGGTB,SNORD45C,ASB17,SNORD45A,SNORD45B,MSH4	-8697,-7826,137193,-7009,-5421,1651
chr14:74363140-74364529	chr14	+	74363151	74364389	True	NM_152445,NM_021188	chr14,chr14	-,+	FAM161B,ZNF410	52501,-9616
chr7:153099028-153100475	chr7	+	153099155	153100407	True	NM_005431,NM_001039350	chr7,chr7	-,+	XRCC2,DPP6	-725905,484011
chr2:207306697-207307546	chr2	+	207307042	207307570	True	NM_005279,NM_003812	chr2,chr2	-,+	GPR1,ADAM23	-224271,797
chr19:52899062-52900221	chr19	+	52899090	52900078	True	NM_001102657,NM_032423	chr19,chr19	-,+	ZNF836,ZNF528	-224194,1042
chr6:42956958-42958538	chr6	+	42957085	42958295	True	NM_006245,NM_000287,NM_180976,NM_180977	chr6,chr6,chr6,chr6	+,-,+,+	PPP2R5D,PEX6,PPP2R5D,PPP2R5D	-4806,-10104,-4806,-4806
chr9:127211166-127211694	chr9	+	127211172	127211742	True	NM_002799,NM_001161808	chr9,chr9	-,+	PSMB7,GPR144	-33451,1680
chr7:6960583-6961895	chr7	+	6960592	6961082	True	NM_198097,NM_173565	chr7,chr7	-,+	C7orf28B,RSPH10B	-94666,-166903
chr12:52994322-52994952	chr12	+	52994602	52994854	True	NM_002284,NM_080747,NM_001146226,NM_001146225	chr12,chr12,chr12,chr12	+,-,-,-	KRT86,KRT72,KRT72,KRT72	-299004,518,518,518
chr4:2246879-2247516	chr4	+	2246895	2247561	True	NM_001193282,NM_024511	chr4,chr4	+,-	LOC402160,HAUS3	173139,-3035
chr20:653574-654238	chr20	+	653680	654259	True	NM_033129,NM_001042353	chr20,chr20	-,+	SCRT2,FAM110A	2614,160096
chr19:41097190-41097773	chr19	+	41097285	41097427	True	NM_001042544,NM_003573,NM_004756,NM_001042545	chr19,chr19,chr19,chr19	+,+,-,+	LTBP4,LTBP4,NUMBL,LTBP4	5713,1644,99180,9849
chr19:55123379-55124310	chr19	+	55123688	55124191	True	NM_006669,NM_145057	chr19,chr19	+,-	LILRB1,CDC42EP5	4437,-139266
chr14:96003038-96004085	chr14	+	96003187	96004101	True	NM_016417,NR_003002,NR_003138,NR_001459	chr14,chr14,chr14,chr14	+,-,-,-	GLRX5,SCARNA13,SNHG10,SNHG10	-1920,-3221,-1978,-1978
chr15:43886640-43887627	chr15	+	43886796	43887622	True	NM_001190214,NM_014659,NM_001130858,NM_001130859,NM_020990	chr15,chr15,chr15,chr15,chr15	-,-,-,-,+	PPIP5K1,PPIP5K1,PPIP5K1,PPIP5K1,CKMT1B	-4345,-9706,-4345,-4345,-1595
chr15:43886640-43887627	chr15	+	43986628	43987454	False	NM_001015001,NM_172097	chr15,chr15	+,-	CKMT1A,CATSPER2	-1595,-45589
chr6:44231169-44231503	chr6	+	44231252	44231472	True	NM_001137560,NM_004556,NM_178148	chr6,chr6,chr6	+,-,-	TMEM151B,NFKBIE,SLC35B2	7007,2103,-5969
chr5:148206915-148207374	chr5	+	148206932	148207347	True	NM_000024,NM_000870	chr5,chr5	+,-	ADRB2,HTR4	-827,-173193
chr7:151107784-151108178	chr7	+	151107916	151108119	True	NR_034012,NR_034013,NM_198285	chr7,chr7,chr7	+,+,-	LOC100131176,LOC100131176,WDR86	-1645,-1645,-792
chr9:130711447-130711906	chr9	+	130711607	130711923	True	NM_203305,NM_001006641	chr9,chr9	-,+	FAM102A,SLC25A25	1120,118555
chr3:138315214-138315954	chr3	+	138315314	138316005	True	NM_001033030,NM_024491	chr3,chr3	+,-	FAIM,CEP70	11536,-2185
chr6:133118223-133118592	chr6	+	133118236	133118466	True	NM_052831,NM_001016	chr6,chr6	-,+	C6orf192,RPS12	1331,17241
chr13:36053073-36053399	chr13	+	36053126	36053429	True	NM_001204197,NM_005584	chr13,chr13	+,-	NBEA,MAB21L1	-2291,-2294
chr12:75784142-75784798	chr12	+	75784183	75784839	True	NM_152436,NM_032606	chr12,chr12	+,-	GLIPR1L2,CAPS2	49,-60347
chr7:149154559-149155751	chr7	+	149154598	149155694	True	NM_015694,NR_036573	chr7,chr7	-,+	ZNF777,LOC155060	2410,-172286
chr10:32639500-32640508	chr10	+	32639500	32640270	True	NM_025209,NM_001026383	chr10,chr10	-,+	EPC1,CCDC7	-3387,94770
chrX:9730049-9731667	chrX	+	9730468	9731713	True	NM_001649,NM_000273	chrX,chrX	+,-	SHROOM2,GPR143	22782,2342
chr17:29157961-29158857	chr17	+	29157997	29158832	True	NM_015986,NM_024857	chr17,chr17	-,+	CRLF3,ATAD5	-6219,190
chr1:98387047-98387603	chr1	+	98387116	98387656	True	NM_000110,NM_001160301,NM_015976	chr1,chr1,chr1	-,-,+	DPYD,DPYD,SNX7	-501,-501,739579
chr11:48262563-48263948	chr11	+	48262607	48263877	True	NM_001004727,NM_001005513	chr11,chr11	+,-	OR4X2,OR4C45	2778,110178
chrX:71405827-71406236	chrX	+	71405875	71406270	True	NR_033187,NM_001170747,NM_017669,NM_006223	chrX,chrX,chrX,chrX	+,+,-,+	PIN4,PIN4,ERCC6L,PIN4	-4408,-4408,52638,-4408
chr1:201853246-201854315	chr1	+	201853331	201854165	True	NM_198149,NM_012134,NR_030775	chr1,chr1,chr1	+,-,+	SHISA4,LMOD1,SHISA4	3639,61601,3631
chr10:90724776-90726390	chr10	+	90724886	90726409	True	NM_001613,NM_000043	chr10,chr10	-,+	ACTA2,FAS	-12306,23878
chr2:211036501-211037113	chr2	+	211036569	211037084	True	NM_152519,NM_199229	chr2,chr2	-,+	C2orf67,RPE	-518,-169239
chr17:56406559-56406886	chr17	+	56406559	56406921	True	NM_024418,NM_004758,NR_027647,NR_029683	chr17,chr17,chr17,chr17	-,-,+,-	BZRAP1,BZRAP1,LPO,MIR142	-407,-407,-90823,1808
chr3:119371750-119372415	chr3	+	119371761	119372226	True	NM_033364,NM_022135	chr3,chr3	+,-	C3orf15,POPDC2	49642,7229
chr16:66848989-66850352	chr16	+	66849015	66850392	True	NM_005182,NM_001136505,NM_001018159	chr16,chr16,chr16	+,-,-	CA7,CCDC79,NAE1	27889,-13492,14546
chr6:107077952-107078822	chr6	+	107078017	107078621	True	NM_032730,NM_018292	chr6,chr6	-,+	RTN4IP1,QRSL1	-644,-628
chr16:56996102-56998029	chr16	+	56996209	56997529	True	NM_000078,NM_024946	chr16,chr16	+,-	CETP,FAM192A	-425,222497
chr17:48449116-48450490	chr17	+	48449329	48450519	True	NM_152463,NM_001166131,NM_016504	chr17,chr17,chr17	+,+,-	EME1,EME1,MRPL27	61,61,93
chr6:90122217-90122987	chr6	+	90122334	90122918	True	NM_021244,NM_014942	chr6,chr6	-,+	RRAGD,ANKRD6	-339,19978
chr1:225613831-225614259	chr1	+	225613910	225614293	True	NM_194442,NM_002296,NM_001130440	chr1,chr1,chr1	-,-,+	LBR,LBR,SRP9	2315,1573,351221
chr15:99645916-99646325	chr15	+	99645972	99646362	True	NM_015286,NM_001167902,NM_145728	chr15,chr15,chr15	+,-,+	SYNM,PGPEP1L,SYNM	-737,-94948,-737
chr16:84226727-84228165	chr16	+	84226868	84227981	True	NM_139174,NM_139353,NM_005679,NM_001145400	chr16,chr16,chr16,chr16	+,-,-,+	ADAD2,TAF1C,TAF1C,ADAD2	-2196,-6206,-6206,-2196
chr19:48744809-48745039	chr19	+	48744828	48745052	True	NM_001184901,NM_001184900,NM_001184903,NM_014959,NR_033679,NR_033678,NR_033680,NM_153608	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,+	CARD8,CARD8,CARD8,CARD8,CARD8,CARD8,CARD8,ZNF114	8102,-508,8102,8102,-508,7888,7888,29601
chr11:27909790-27910076	chr11	+	27910020	27910116	True	NR_030341,NM_170731	chr11,chr11	+,-	MIR610,BDNF	168245,-166415
chrX:16889298-16889586	chrX	+	16889385	16889609	True	NM_001198719,NM_002893,NM_001080975	chrX,chrX,chrX	-,-,+	RBBP7,RBBP7,REPS2	-1407,-851,75204
chr1:27702690-27703426	chr1	+	27702905	27703271	True	NM_003665,NM_207397,NM_005281,NM_004672,NM_173452	chr1,chr1,chr1,chr1,chr1	-,-,+,-,-	FCN3,CD164L2,GPR3,MAP3K6,FCN3	-1590,6584,15880,-9568,-1590
chr16:29676013-29676278	chr16	+	29676052	29676298	True	NR_002593,NM_003123,NM_001030288	chr16,chr16,chr16	-,+,+	SLC7A5P1,SPN,SPN	-51014,-1523,-1803
chr16:58330538-58331286	chr16	+	58330640	58330923	True	NM_014157,NM_001080492	chr16,chr16	+,-	CCDC113,PRSS54	-46860,-1689
chr12:112279765-112280007	chr12	+	112279765	112279885	True	NR_015404,NM_139078,NM_003668	chr12,chr12,chr12	-,+,+	C12orf47,MAPKAPK5,MAPKAPK5	871,393,393
chr7:63504548-63505144	chr7	+	63504682	63505005	True	NM_178558,NM_001159522	chr7,chr7	-,+	ZNF680,ZNF727	518551,815
chr19:36240627-36241947	chr19	+	36240742	36241956	True	NM_144987,NM_001040425,NM_024660,NM_001039887,NM_144617,NM_172341,NM_019104	chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,+,-,+,+	U2AF1L4,U2AF1L4,IGFLR1,C19orf55,HSPB6,PSENEN,LIN37	-4406,-4406,-7391,7087,6032,-4299,-1281
chr8:72973708-72975336	chr8	+	72973855	72975066	True	NM_007332,NR_033651	chr8,chr8	-,+	TRPA1,LOC100132891	12804,-217556
chr7:86847824-86848465	chr7	+	86847829	86848360	True	NM_024315,NM_021145	chr7,chr7	-,+	C7orf23,DMTF1	722,-66011
chr11:14695684-14697057	chr11	+	14695888	14697078	True	NM_000922,NM_148976	chr11,chr11	+,-	PDE3B,PSMA1	-30670,-30708
chr1:17248392-17248875	chr1	+	17248391	17248885	True	NM_014675,NM_001135248	chr1,chr1	+,-	CROCC,MFAP2	3,58338
chr11:71936282-71936486	chr11	+	71936405	71936497	True	NM_001113534,NM_005169,NM_001567,NM_000803,NM_001113535,NM_001113536	chr11,chr11,chr11,chr11,chr11,chr11	+,-,+,+,+,+	FOLR2,PHOX2A,INPPL1,FOLR2,FOLR2,FOLR2	-8637,18773,-574,-8637,-8637,-8637
chrX:52682614-52683576	chrX	+	52682825	52683622	True	NR_027250,NM_173358	chrX,chrX	+,-	SSX8,SSX7	-30891,378
chrX:52682614-52683576	chrX	+	48165352	48165402	False	NM_021014,NM_005635	chrX,chrX	-,+	SSX3,SSX1	50790,-50606
chr19:36399165-36399514	chr19	+	36399315	36399443	True	NM_001007469,NM_003332,NM_001173514,NM_001173515,NR_033390,NM_198125,NM_139239,NM_014266	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,-,-,-,-,-,+	HCST,TYROBP,TYROBP,TYROBP,TYROBP,TYROBP,NFKBID,HCST	-5984,-104,-104,-104,-104,-104,-7763,-5984
chr1:202130857-202131067	chr1	+	202130937	202131115	True	NR_002930,NR_037663,NR_037664,NM_001199797,NM_080588,NM_002832	chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,-,-,-	PTPRVP,PTPN7,PTPN7,PTPN7,PTPN7,PTPN7	6063,-221,-221,-221,-1818,-221
chr19:19639312-19639717	chr19	+	19639384	19639632	True	NM_032037,NM_153221,NM_001190328,NM_198537	chr19,chr19,chr19,chr19	-,+,+,+	TSSK6,CILP2,YJEFN3,YJEFN3	-12915,9441,37,37
chr16:31100136-31100903	chr16	+	31100211	31100903	True	NM_024006,NM_001039503,NM_014699,NM_206824	chr16,chr16,chr16,chr16	-,-,+,-	VKORC1,PRSS53,ZNF646,VKORC1	5423,-81,-14519,5423
chr2:232651308-232651938	chr2	+	232651618	232651983	True	NM_022730,NM_002601	chr2,chr2	+,-	COPS7B,PDE6D	-507,-5644
chr8:23021870-23022190	chr8	+	23021882	23022154	True	NM_003840,NR_033928	chr8,chr8	-,+	TNFRSF10D,LOC389641	-342,60579
chr9:138393246-138393568	chr9	+	138393447	138393553	True	NM_016034,NM_001048265,NM_144654	chr9,chr9,chr9	+,-,-	MRPS2,C9orf116,C9orf116	-1015,-1686,-1686
chrX:110489534-110490185	chrX	+	110489613	110490223	True	NM_001128173,NM_014289	chrX,chrX	+,-	PAK3,CAPN6	-123360,23601
chr8:37373188-37373594	chr8	+	37373210	37373546	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	179754,232068
chr9:132596120-132596641	chr9	+	132596129	132596687	True	NM_006676,NM_001110303,NM_000113,NM_001008563,NM_016520	chr9,chr9,chr9,chr9,chr9	+,+,-,+,-	USP20,USP20,TOR1A,USP20,C9orf78	1008,1008,-9688,1069,943
chr11:3665135-3665974	chr11	+	3665417	3665603	True	NM_001079536,NM_053017,NM_004314	chr11,chr11,chr11	-,-,+	ART5,ART5,ART1	-1871,-1932,757
chr16:57671544-57672399	chr16	+	57671986	57672310	True	NM_001145771,NM_001145773,NM_001145772,NM_001145774,NM_033212,NM_201525,NM_201524	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,-,+,+	GPR56,GPR56,GPR56,GPR56,CCDC102A,GPR56,GPR56	-9619,-9619,-9619,896,-101509,-9619,-9619
chr17:26644601-26645392	chr17	+	26644790	26645386	True	NM_014573,NR_028334	chr17,chr17	+,-	TMEM97,FLJ40504	734,-10382
chr3:43147606-43149090	chr3	+	43147693	43148936	True	NM_001129908,NM_032806	chr3,chr3	+,-	FAM198A,C3orf39	-126986,-128
chr8:12809902-12810339	chr8	+	12809915	12810249	True	NM_020844,NR_015383	chr8,chr8	+,-	KIAA1456,LOC340357	-6783,-141005
chr11:66315843-66316502	chr11	+	66315876	66316454	True	NM_001104,NM_207340	chr11,chr11	+,-	ACTN3,ZDHHC24	-1538,-2205
chr16:48398144-48399811	chr16	+	48398265	48399271	True	NM_001006610,NM_031490	chr16,chr16	-,+	SIAH1,LONP2	563,-120111
chr13:44948754-44949672	chr13	+	44949005	44949717	True	NM_001010897,NM_006022	chr13,chr13	+,-	SERP2,TSC22D1	-1085,61319
chr21:44395583-44395785	chr21	+	44395604	44395724	True	NM_004571,NM_018669	chr21,chr21	+,-	PKNOX1,WDR4	-1013,-95926
chr12:49415447-49415846	chr12	+	49415540	49415890	True	NM_002733,NM_212461,NM_005430	chr12,chr12,chr12	-,-,+	PRKAG1,PRKAG1,WNT1	-2948,-2948,-43355
chr10:118031343-118031545	chr10	+	118031430	118031544	True	NM_145793,NM_005264,NM_198515,NM_001145453	chr10,chr10,chr10,chr10	-,-,+,-	GFRA1,GFRA1,C10orf96,GFRA1	325,1632,52395,1302
chrX:72667377-72668537	chrX	+	72667555	72668407	True	NM_005193,NR_029423	chrX,chrX	+,-	CDX4,LOC139201	-516,114564
chrX:15671364-15673143	chrX	+	15671368	15672962	True	NM_020665,NR_026551	chrX,chrX	-,+	TMEM27,CA5BP1	10242,20076
chr7:158621655-158622005	chr7	+	158621810	158621994	True	NM_018051,NM_020728	chr7,chr7	+,-	WDR60,ESYT2	27274,375
chr19:1133352-1133696	chr19	+	1133354	1133738	True	NM_001100122,NM_001039848	chr19,chr19	-,+	SBNO2,GPX4	-1081,-28756
chr1:120901685-120902015	chr1	+	120901793	120902035	True	NR_027337,NM_001004340	chr1,chr1	+,-	HIST2H2BA,FCGR1B	3998,33959
chr17:76021165-76022379	chr17	+	76021236	76022424	True	NM_018996,NM_001127198	chr17,chr17	+,-	TNRC6C,TMC6	-20969,102487
chr11:124628847-124629192	chr11	+	124628894	124629180	True	NM_138961,NM_006176,NM_014312	chr11,chr11,chr11	-,+,-	ESAM,NRGN,VSIG2	3093,-19116,-6785
chr2:28615541-28615845	chr2	+	28615660	28615752	True	NM_017910,NM_005253	chr2,chr2	-,+	TRMT61B,FOSL2	477473,26
chr16:67449582-67449945	chr16	+	67449724	67449929	True	NM_013304,NM_000196	chr16,chr16	-,+	ZDHHC1,HSD11B2	461,15106
chr12:56138116-56138840	chr12	+	56138138	56138806	True	NM_001780,NM_005811	chr12,chr12	-,+	CD63,GDF11	-15228,-1125
chr3:42742635-42743139	chr3	+	42742854	42743140	True	NM_152393,NM_020707,NR_027753	chr3,chr3,chr3	+,-,-	KBTBD5,HHATL,HHATL	-15894,1229,-7
chr11:66206582-66207045	chr11	+	66206610	66207096	True	NM_170739,NM_170738,NM_178864,NM_016050	chr11,chr11,chr11,chr11	-,-,+,-	MRPL11,MRPL11,NPAS4,MRPL11	-300,-300,-18186,-300
chr18:3363859-3364970	chr18	+	3364372	3364792	True	NM_019856,NM_174886	chr18,chr18	-,+	MYOM1,TGIF1	-144266,47279
chr6:163146762-163148299	chr6	+	163146917	163148187	True	NM_152410,NM_004562,NM_013987,NM_001080379,NM_001080378,NM_013988	chr6,chr6,chr6,chr6,chr6,chr6	+,-,-,+,+,-	PACRG,PARK2,PARK2,PACRG,PACRG,PARK2	-24,698,698,814,-24,698
chr5:43401039-43402644	chr5	+	43401244	43402224	True	NM_012343,NM_148672	chr5,chr5	+,-	NNT,CCL28	200566,10314
chr16:55908693-55909391	chr16	+	55908703	55909362	True	NM_145024,NR_003276,NM_001143685	chr16,chr16,chr16	-,+,-	CES5A,CES1P1,CES5A	-17,-114243,-17
chr17:27404124-27405125	chr17	+	27404169	27405027	True	NM_016518,NM_004740	chr17,chr17	+,-	PIPOX,TIAF1	-34302,-1542
chr9:95433360-95434027	chr9	+	95433560	95433704	True	NM_022755,NR_036505	chr9,chr9	-,+	IPPK,LOC100128361	-1013,-53280
chr11:78034934-78036558	chr11	+	78035294	78036611	True	NM_020798,NM_012296	chr11,chr11	+,-	USP35,GAB2	-135487,16372
chr11:57484979-57486666	chr11	+	57485473	57486499	True	NR_037645,NM_015959,NM_001144012,NR_037646,NM_153450,NR_026593	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,-,+	TMX2,TMX2,TMX2,TMX2-CTNND1,MED19,TMX2	-5536,-5536,-5536,-5536,-5800,-5536
chr16:49412244-49412524	chr16	+	49412261	49412573	True	NM_144602,NM_004352	chr16,chr16	+,-	C16orf78,CBLN1	-4504,-96519
chr19:34177376-34177610	chr19	+	34177385	34177617	True	NM_001166057,NM_022467	chr19,chr19	-,+	PEPD,CHST8	-164586,-2002
chr17:79816959-79817880	chr17	+	79817258	79817744	True	NM_000918,NM_001002244	chr17,chr17	-,+	P4HB,ANAPC11	850,31854
chr7:43767732-43768376	chr7	+	43767858	43768348	True	NM_000712,NM_018224	chr7,chr7	+,-	BLVRA,C7orf44	29923,785
chr19:37342075-37342583	chr19	+	37342085	37342615	True	NM_003419,NM_206894	chr19,chr19	+,-	ZNF345,ZNF790	-869,-12801
chr12:39822706-39824222	chr12	+	39822859	39823873	True	NM_001031748,NM_001173463	chr12,chr12	+,-	C12orf40,KIF21A	196098,13376
chr19:29418183-29418399	chr19	+	29418362	29418434	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	37603,285752
chr11:6291224-6291458	chr11	+	6291241	6291449	True	NM_176875,NM_032127	chr11,chr11	+,-	CCKBR,FAM160A2	-10326,-35300
chr3:174648705-174650235	chr3	+	174648791	174650283	True	NM_207015,NM_031955	chr3,chr3	+,-	NAALADL2,SPATA16	-71739,-1789733
chr11:62536404-62537221	chr11	+	62537036	62537240	True	NM_002696,NM_006473,NM_024784	chr11,chr11,chr11	+,+,-	POLR2G,TAF6L,ZBTB3	-8076,1634,-15380
chr13:21276050-21277250	chr13	+	21276109	21277065	True	NM_138284,NM_174928	chr13,chr13	+,-	IL17D,N6AMT2	416,71044
chr19:5822427-5823350	chr19	+	5822478	5822616	True	NM_004558,NM_000150	chr19,chr19	+,-	NRTN,FUT6	1201,17176
chr2:61763938-61764174	chr2	+	61763997	61764197	True	NM_152392,NM_003400	chr2,chr2	+,-	AHSA2,XPO1	-359493,1271
chr7:76026558-76026802	chr7	+	76026581	76026705	True	NM_080744,NM_007155	chr7,chr7	-,+	SRCRB4D,ZP3	12357,135
chr1:10458248-10458489	chr1	+	10458303	10458520	True	NM_004401,NM_002631	chr1,chr1	-,+	DFFA,PGD	74143,564
chr7:32513336-32514244	chr7	+	32513381	32514114	True	NM_015060,NM_012322	chr7,chr7	+,-	AVL9,LSM5	21061,15960
chr18:68097827-68099155	chr18	+	68097866	68098884	True	NM_173630,NM_004232	chr18,chr18	-,+	RTTN,SOCS6	-224904,-141780
chr9:19274586-19275269	chr9	+	19274616	19274980	True	NM_001010,NM_017925	chr9,chr9	-,+	RPS6,DENND4C	105309,15768
chr10:129703900-129704333	chr10	+	129703904	129704250	True	NM_006504,NM_152311	chr10,chr10	+,-	PTPRE,CLRN3	1074,-12693
chr1:20991163-20991938	chr1	+	20991204	20991716	True	NM_032409,NM_005216	chr1,chr1	+,-	PINK1,DDOST	-31307,-3167
chr1:201916522-201917918	chr1	+	201916559	201917640	True	NM_006335,NM_012134	chr1,chr1	+,-	TIMM17A,LMOD1	6978,-843
chr8:125546241-125546784	chr8	+	125546416	125546667	True	NM_001146160,NR_027427,NM_005005,NM_032026	chr8,chr8,chr8,chr8	-,-,+,-	TATDN1,TATDN1,NDUFB9,TATDN1	4723,4723,4675,4723
chr8:37656342-37656614	chr8	+	37656358	37656610	True	NR_003671,NM_018310,NM_032777	chr8,chr8,chr8	-,-,+	LOC728024,BRF2,GPR124	-50794,50871,-2008
chr16:30537207-30537530	chr16	+	30537353	30537437	True	NM_023931,NM_024671,NM_002209	chr16,chr16,chr16	-,-,+	ZNF747,ZNF768,ITGAL	8807,523,-53421
chr14:105768151-105769559	chr14	+	105768151	105768920	True	NM_001519,NM_001100913	chr14,chr14	-,+	BRF1,PACS2	-822,12160
chr14:21353447-21354720	chr14	+	21353582	21354457	True	NM_002935,NM_198235	chr14,chr14	+,-	RNASE3,RNASE1	5104,-82546
chr14:21353447-21354720	chr14	+	21417519	21417569	False	NM_002934,NM_201538	chr14,chr14	+,-	RNASE2,NDRG2	6060,75745
chr2:155555149-155555439	chr2	+	155555219	155555471	True	NM_019845,NM_002239	chr2,chr2	-,+	RPRM,KCNJ3	-1219897,-177
chr12:53230146-53230521	chr12	+	53230239	53230557	True	NM_199187,NM_175834	chr12,chr12	+,-	KRT18,KRT79	112097,-2162
chr20:52790372-52790611	chr20	+	52790399	52790597	True	NM_002623,NM_001128915,NM_000782	chr20,chr20,chr20	+,-,-	PFDN4,CYP24A1,CYP24A1	33904,-1,-1
chr22:25336053-25336280	chr22	+	25336181	25336251	True	NM_001145206,NM_001001663	chr22,chr22	+,-	KIAA1671,TMEM211	87689,-867
chr11:82864584-82865740	chr11	+	82864862	82865696	True	NM_015885,NM_014488	chr11,chr11	+,-	PCF11,RAB30	2440,-81978
chr14:22009437-22010597	chr14	+	22009809	22010276	True	NM_005407,NM_014828	chr14,chr14	-,+	SALL2,TOX4	-4472,-64525
chr14:96967301-96968209	chr14	+	96967371	96968195	True	NM_018036,NM_032632	chr14,chr14	-,+	ATG2B,PAPOLA	-137693,524
chrX:149633897-149634202	chrX	+	149633943	149634247	True	NM_005491,NM_001184808	chrX,chrX	+,-	MAMLD1,CD99L2	-20283,433092
chr2:42712881-42714151	chr2	+	42712942	42714030	True	NM_020744,NM_172344,NM_133329	chr2,chr2,chr2	+,-,-	MTA3,KCNG3,KCNG3	81640,7259,7259
chr3:44905762-44906857	chr3	+	44905815	44906898	True	NR_030290,NM_003241,NM_020696,NM_144638	chr3,chr3,chr3,chr3	+,+,-,+	MIR564,TGM4,KIAA1143,TMEM42	-2486,9199,-102642,-2458
chr16:84683920-84684774	chr16	+	84683961	84684761	True	NM_021149,NM_024731	chr16,chr16	-,+	COTL1,KLHL36	-32292,-1881
chr13:78112544-78113763	chr13	+	78112665	78113323	True	NM_003843,NM_144777,NR_037438,NM_001160706	chr13,chr13,chr13,chr13	+,+,-,+	SCEL,SCEL,MIR3665,SCEL	-2907,-2907,158978,-2907
chr1:223309097-223310257	chr1	+	223309197	223310160	True	NM_003268,NM_152610	chr1,chr1	-,+	TLR5,C1orf65	6525,256554
chr3:125239974-125240269	chr3	+	125239984	125240226	True	NR_024250,NM_003794	chr3,chr3	+,-	LOC100125556,SNX4	395217,-926
chr3:130546015-130546528	chr3	+	130546299	130546498	True	NM_014602,NM_001199181	chr3,chr3	-,+	PIK3R4,ATP2C1	-80603,22870
chr4:78976650-78977688	chr4	+	78977049	78977487	True	NM_025074,NM_144571,NM_001166133	chr4,chr4,chr4	+,-,+	FRAS1,CNOT6L,FRAS1	1236,-236505,1236
chr14:77435566-77435813	chr14	+	77435675	77435780	True	NM_024496,NM_033426	chr14,chr14	-,+	IRF2BPL,KIAA1737	59311,128797
chr1:197869565-197871076	chr1	+	197870055	197871100	True	NM_001195216,NM_001024594	chr1,chr1	-,+	DENND1B,C1orf53	-125432,581
chr17:38927981-38928297	chr17	+	38927986	38928336	True	NM_181539,NM_001195387	chr17,chr17	-,+	KRT26,TMEM99	125,47007
chr3:183949061-183949476	chr3	+	183949080	183949304	True	NM_005787,NR_030410,NM_138345	chr3,chr3,chr3	-,+,+	ALG3,MIR1224,VWA5B2	17505,9888,-814
chr11:65549400-65549632	chr11	+	65549584	65549674	True	NM_138368,NM_004561	chr11,chr11	-,+	DKFZp761E198,OVOL1	-1762,4854
chr17:3749775-3750235	chr17	+	3749780	3750264	True	NM_018553,NM_031965,NM_001114118	chr17,chr17,chr17	-,+,-	C17orf85,GSG2,C17orf85	-240,-122636,-240
chr1:150897408-150897662	chr1	+	150897507	150897571	True	NM_001145415,NM_001668,NR_026977,NM_012432	chr1,chr1,chr1,chr1	+,-,+,+	SETDB1,ARNT,SETDB1,SETDB1	1243,-48263,1253,1243
chr7:82767042-82767696	chr7	+	82767069	82767708	True	NM_033026,NM_001127444	chr7,chr7	-,+	PCLO,CD36	24540,-2491368
chr9:129882822-129883298	chr9	+	129883149	129883293	True	NM_032293,NM_012098	chr9,chr9	+,-	GARNL3,ANGPTL2	143462,1801
chr8:25276732-25278381	chr8	+	25276767	25278148	True	NM_000825,NM_001083111,NM_152562	chr8,chr8,chr8	-,-,+	GNRH1,GNRH1,CDCA2	4472,4472,38364
chr10:124219988-124220541	chr10	+	124220189	124220491	True	NM_001099667,NM_001010912,NM_002775	chr10,chr10,chr10	+,-,+	ARMS2,C10orf120,HTRA1	-6061,238909,549
chr17:72932688-72932966	chr17	+	72932688	72933012	True	NM_178233,NM_173477	chr17,chr17	+,-	OTOP3,USH1G	-842,-13337
chr1:21614988-21616096	chr1	+	21615048	21616124	True	NM_001113347,NM_032264,NM_001113349,NM_001397	chr1,chr1,chr1,chr1	-,+,-,-	ECE1,NBPF3,ECE1,ECE1	-8865,150506,692,908
chr5:68393100-68394275	chr5	+	68393697	68394070	True	NM_176816,NM_022902,NM_024055	chr5,chr5,chr5	-,+,+	CCDC125,SLC30A5,SLC30A5	222391,-3874,-3938
chr6:137812782-137814319	chr6	+	137812958	137814323	True	NM_006290,NM_175747	chr6,chr6	+,-	TNFAIP3,OLIG3	374257,1258
chr2:11054227-11054444	chr2	+	11054285	11054443	True	NM_005742,NM_002236	chr2,chr2	-,+	PDIA6,KCNF1	-101325,-2273
chr16:48655786-48656782	chr16	+	48655829	48656746	True	NM_153029,NM_031490	chr16,chr16	-,+	N4BP1,LONP2	-11709,-377669
chr22:31608954-31609892	chr22	+	31609001	31609577	True	NR_037496,NM_005569	chr22,chr22	-,+	MIR3928,LIMK2	-52896,-802
chr3:50359164-50359541	chr3	+	50359168	50359576	True	NM_007275,NM_007022,NM_033158,NM_153281,NM_003773	chr3,chr3,chr3,chr3,chr3	-,+,-,-,-	TUSC2,CYB561D2,HYAL2,HYAL1,HYAL2	6142,28720,755,-9356,755
chr1:24977998-24978577	chr1	+	24978053	24978407	True	NM_005839,NM_001199012	chr1,chr1	+,-	SRRM1,C1orf201	-8515,-236466
chr11:65490364-65491652	chr11	+	65490693	65491550	True	NM_182710,NM_032193	chr11,chr11	+,-	KAT5,RNASEH2C	-11256,-2284
chr5:54530900-54532644	chr5	+	54531203	54532324	True	NM_021147,NM_001190787,NM_015360	chr5,chr5,chr5	-,-,+	CCNO,LOC345643,SKIV2L2	-1695,-8060,71251
chr15:101421993-101422259	chr15	+	101422079	101422239	True	NM_001040616,NM_000693	chr15,chr15	-,+	LINS,ALDH1A3	-279634,-2121
chr19:35627457-35627957	chr19	+	35627507	35627683	True	NM_005031,NM_021902,NM_139284,NM_022006	chr19,chr19,chr19,chr19	+,+,-,+	FXYD1,FXYD1,LGI4,FXYD7	2708,2048,-1329,6470
chr13:46669675-46671488	chr13	+	46669692	46671393	True	NM_001872,NM_016413,NM_152719	chr13,chr13,chr13	-,-,+	CPB2,CPB2,SPERT	7868,7868,-393298
chr13:72440180-72440395	chr13	+	72440179	72440371	True	NM_004392,NM_080760,NM_024808,NM_080759	chr13,chr13,chr13,chr13	-,-,+,-	DACH1,DACH1,C13orf34,DACH1	1009,1009,861670,1009
chr6:112377086-112378288	chr6	+	112377142	112378261	True	NM_016262,NM_198239,NM_003880	chr6,chr6,chr6	-,+,+	TUBE1,WISP3,WISP3	30549,-1836,-1929
chr7:148935305-148935743	chr7	+	148935334	148935708	True	NM_012256,NM_001001661	chr7,chr7	+,-	ZNF212,ZNF425	1033,-111896
chr3:170271989-170272811	chr3	+	170271997	170272640	True	NM_020949,NM_001185056	chr3,chr3	-,+	SLC7A14,CLDN11	31280,-133023
chr17:72272391-72273446	chr17	+	72272417	72273135	True	NR_026914,NM_001172810,NM_023036	chr17,chr17,chr17	-,+,+	MGC16275,DNAI2,DNAI2	-62957,-2082,-2082
chr12:56137832-56138116	chr12	+	56137978	56138066	True	NM_001780,NM_005811	chr12,chr12	-,+	CD63,GDF11	-15068,-965
chr2:27254204-27254652	chr2	+	27254233	27254609	True	NM_001083590,NM_017727,NM_001134693	chr2,chr2,chr2	+,+,-	TMEM214,TMEM214,OST4	1164,1164,40008
chr11:68516773-68517162	chr11	+	68516834	68517195	True	NM_001039656,NM_015973,NM_004923	chr11,chr11,chr11	-,+,-	MTL5,GAL,MTL5	1843,-64903,1843
chr13:21476490-21476762	chr13	+	21476521	21476685	True	NM_022459,NM_138284	chr13,chr13	-,+	XPO4,IL17D	278,-199090
chrX:12889038-12889583	chrX	+	12889058	12889494	True	NM_016562,NR_030727	chrX,chrX	+,-	TLR7,LOC349408	-3909,71977
chr17:21522295-21523035	chr7	+	57646257	57646310	True	NR_030766,NM_001159279	chr7,chr7	-,+	LOC642006,ZNF716	-398394,-136428
chr1:85666598-85666839	chr1	+	85666668	85666888	True	NM_145172,NM_032184	chr1,chr1	+,-	WDR63,SYDE2	-138726,44
chr21:35289656-35290402	chr21	+	35289819	35289975	True	NM_032476,NM_001697	chr21,chr21	+,-	MRPS6,ATP5O	155847,-1661
chr6:11232856-11233316	chr6	+	11233215	11233338	True	NM_001135575,NM_182966,NM_006403	chr6,chr6,chr6	+,-,-	LOC221710,NEDD9,NEDD9	-139000,-300,-300
chr19:56733043-56733398	chr19	+	56733230	56733370	True	NM_024303,NM_033106	chr19,chr19	-,+	ZSCAN5A,GALP	6339,-45893
chr16:88924929-88925760	chr16	+	88924981	88925793	True	NM_001080487,NM_000512,NM_016209	chr16,chr16,chr16	-,-,+	PABPN1L,GALNS,TRAPPC2L	7325,-1607,-1526
chrX:118284957-118286503	chrX	+	118285144	118286545	True	NM_006667,NM_020721	chrX,chrX	+,-	PGRMC1,KIAA1210	83665,-602
chr4:84034469-84035459	chr4	+	84034531	84035093	True	NM_016619,NM_001130716,NM_001130715,NM_016129	chr4,chr4,chr4,chr4	-,-,-,+	PLAC8,PLAC8,PLAC8,COPS4	878,-3519,878,-78343
chr3:197301382-197303163	chr3	+	197301678	197302865	True	NM_203315,NM_001011537	chr3,chr3	-,+	BDH1,FYTTD1	-1484,173558
chr9:130157030-130158288	chr9	+	130157050	130158306	True	NM_014580,NR_002449	chr9,chr9	+,-	SLC2A8,SNORA65	1158,52660
chr14:23511523-23511850	chr14	+	23511589	23511853	True	NM_001099780,NM_001144932,NM_002797,NM_001130725	chr14,chr14,chr14,chr14	+,-,-,-	PSMB11,PSMB5,PSMB5,PSMB5	-264,-7235,-7235,-7160
chr17:5403733-5404085	chr17	+	5403732	5404051	True	NM_001162371,NM_024039	chr17,chr17	-,+	LOC728392,MIS12	318,-13539
chr19:45200814-45201214	chr19	+	45200881	45201251	True	NM_001039213,NR_027754	chr19,chr19	+,-	CEACAM16,CEACAM22P	1169,-140731
chr2:71163267-71164456	chr2	+	71163439	71163960	True	NM_144582,NM_001692	chr2,chr2	-,+	TEX261,ATP6V1B1	58092,-492
chr3:54167569-54168756	chr3	+	54167579	54168639	True	NM_018398,NM_021237	chr3,chr3	+,-	CACNA2D3,SELK	-10944,-241590
chr1:227128250-227129330	chr1	+	227128433	227129031	True	NM_020247,NM_002221	chr1,chr1	+,-	ADCK3,ITPKB	-546,-201557
chr22:27137074-27138737	chr22	+	27137087	27138383	True	NR_033321,NM_001887	chr22,chr22	+,-	MIAT,CRYBB1	-83692,-123096
chrX:84574450-84576125	chrX	+	84574937	84575130	True	NM_021998,NM_024921	chrX,chrX	+,-	ZNF711,POF1B	-76004,59677
chr1:44402565-44403064	chr1	+	44402653	44403007	True	NM_057090,NM_001136215,NM_014652,NM_006934,NM_057091	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	ARTN,ARTN,IPO13,SLC6A9,ARTN	-3712,-3712,9470,80040,-3712
chr19:58222680-58223164	chr19	+	58222696	58222982	True	NM_001085384,NM_138347	chr19,chr19	-,+	ZNF154,ZNF551	-2117,-29398
chr14:38066484-38066842	chr14	+	38066529	38066887	True	NM_138731,NM_004496	chr14,chr14	+,-	MIPOL1,FOXA1	-399462,-2040
chr5:6448996-6449374	chr5	+	6449012	6449344	True	NM_001145161,NM_032286	chr5,chr5	+,-	UBE2QL1,MED10	-327,-70373
chr7:26195978-26196452	chr7	+	26196159	26196383	True	NM_002137,NM_004289	chr7,chr7	-,+	HNRNPA2B1,NFE2L3	44080,-4363
chr18:74469842-74471112	chr18	+	74469861	74471063	True	NM_007345,NM_001025081	chr18,chr18	+,-	ZNF236,MBP	65052,258042
chr17:35963209-35964209	chr17	+	35963210	35963929	True	NM_007247,NM_007026,NM_198882,NM_001163546,NM_001163547,NM_001163544,NM_001163545,NM_080550	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,-,-,-,-,-,-	SYNRG,DUSP14,SYNRG,SYNRG,SYNRG,SYNRG,SYNRG,SYNRG	5608,-113317,5608,5608,5608,5608,5608,5608
chr17:78151416-78151917	chr17	+	78151688	78151870	True	NM_052819,NM_024110,NM_014740	chr17,chr17,chr17	+,+,-	CARD14,CARD14,EIF4A3	9728,410,-30706
chr3:48263881-48264364	chr3	+	48263889	48264247	True	NM_004345,NM_201567	chr3,chr3	+,-	CAMP,CDC25A	614,-34088
chr12:104233983-104234389	chr12	+	104233983	104234401	True	NM_003299,NM_001031701	chr12,chr12	+,-	HSP90B1,NT5DC3	89787,624
chr11:94319627-94320167	chr11	+	94319751	94320051	True	NM_005591,NM_152431	chr11,chr11	-,+	MRE11A,PIWIL4	-92711,-19336
chr15:40600277-40600619	chr15	+	40600516	40600594	True	NM_004573,NM_001145643	chr15,chr15	-,+	PLCB2,PHGR1	-342,42639
chr13:103424792-103425016	chr13	+	103424793	103424887	True	NM_001159596,NM_138779	chr13,chr13	+,-	BIVM,C13orf27	26511,1312
chr4:4310425-4310745	chr4	+	4310457	4310781	True	NM_017816,NM_145291	chr4,chr4	-,+	LYAR,ZBTB49	-18561,-18592
chr17:79214132-79215572	chr17	+	79214698	79215568	True	NM_144679,NM_001086521	chr17,chr17	-,+	C17orf56,C17orf89	-1807,-1638
chr17:4486198-4487487	chr17	+	4486232	4487282	True	NM_198501,NM_001114974,NM_153338	chr17,chr17,chr17	+,+,-	SMTNL2,SMTNL2,GGT6	-7,551,-22356
chr18:55861049-55861577	chr18	+	55861207	55861625	True	NM_001144970,NM_005603	chr18,chr18	+,-	NEDD4L,ATP8B1	1011,-390880
chr8:82637385-82639031	chr8	+	82637777	82638877	True	NM_001170797,NM_001170796,NM_024699,NR_033196,NR_033194,NR_033195,NR_033193,NM_152284	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,-,-,-,+	ZFAND1,ZFAND1,ZFAND1,ZFAND1,ZFAND1,ZFAND1,ZFAND1,CHMP4C	-4238,-4238,-4238,-4238,-4238,-4238,-4238,5810
chr5:54456054-54456792	chr5	+	54456061	54456690	True	NR_029960,NM_001008397,NR_030387	chr5,chr5,chr5	-,+,-	MIR449A,GPX8,MIR449B	9811,-140,9931
chrY:22746800-22748330	chrY	+	22747076	22748377	True	NM_004681,NR_001542	chrY,chrY	+,-	EIF1AY,TTTY10	-9518,-65962
chr17:43210698-43210989	chr17	+	43210717	43210861	True	NM_024722,NM_001135704,NM_001135707,NM_001135706,NM_001135705,NM_133373	chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,-	ACBD4,ACBD4,ACBD4,ACBD4,ACBD4,PLCD3	2152,-801,2152,2152,2152,-826
chr1:110920744-110922625	chr1	+	110921140	110922160	True	NM_001201546,NM_022768	chr1,chr1	-,+	SLC16A4,RBM15	11607,-39260
chr20:48770855-48771355	chr20	+	48770885	48771360	True	NM_001162505,NM_199129,NR_027889,NM_005194,NM_199203	chr20,chr20,chr20,chr20,chr20	-,-,-,+,-	TMEM189,TMEM189,TMEM189,CEBPB,TMEM189-UBE2V1	-550,-550,-550,36015,-550
chr5:152893982-152895407	chr5	+	152894042	152895457	True	NM_018691,NM_001114183	chr5,chr5	-,+	FAM114A2,GRIA1	523091,-24020
chr19:2944001-2944702	chr19	+	2944003	2944085	True	NM_021217,NM_001143986	chr19,chr19	-,+	ZNF77,TLE6	934,33450
chr21:27543458-27544276	chr21	+	27543463	27544114	True	NM_201413,NM_000484,NM_001204302,NM_201414,NM_001204301,NM_001136129,NM_002040,NM_001136131,NM_001136130,NM_001204303	chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21	-,-,-,-,-,-,+,-,-,-	APP,APP,APP,APP,APP,APP,GABPA,APP,APP,APP	-325,-325,-325,-325,-325,-325,-436185,-17,-325,-325
chr11:796989-797300	chr11	+	797070	797280	True	NM_145887,NM_145886,NM_024698,NM_001191060,NM_001191061,NM_001004,NM_016564	chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,-,+,-	LRDD,LRDD,SLC25A22,SLC25A22,SLC25A22,RPLP2,CEND1	8020,8020,-807,765,1039,12655,-6944
chr1:150257868-150259070	chr1	+	150257976	150259093	True	NM_018997,NM_016022,NM_144697,NM_031901	chr1,chr1,chr1,chr1	+,-,+,+	MRPS21,APH1A,C1orf51,MRPS21	7175,-16444,-2800,7175
chr16:69372359-69373302	chr16	+	69372412	69373232	True	NM_022341,NM_001199434,NM_016101,NM_032382	chr16,chr16,chr16,chr16	-,+,+,-	PDF,NIP7,NIP7,COG8	-7914,182,182,344
chr19:46012106-46012606	chr19	+	46012225	46012618	True	NM_003370,NM_206900	chr19,chr19	+,-	VASP,RTN2	-1588,-11912
chr1:39802864-39803166	chr1	+	39802863	39803164	True	NM_033044,NR_003929	chr1,chr1	+,-	MACF1,PPIEL	-6106,222263
chr15:43658984-43660443	chr15	+	43659261	43660037	True	NM_014444,NM_152455	chr15,chr15	+,-	TUBGCP4,ZSCAN29	3275,2271
chr8:42749426-42749866	chr8	+	42749493	42749682	True	NM_001160223,NM_001160224,NM_001160225,NM_032410,NM_030954,NR_027669,NR_027668	chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,+,-,-,-	RNF170,RNF170,RNF170,HOOK3,RNF170,RNF170,RNF170	2235,2235,2235,2350,2235,2235,2235
chr17:19263949-19265648	chr17	+	19264065	19265623	True	NM_015681,NM_139032	chr17,chr17	-,+	B9D1,MAPK7	473,15410
chr17:47024037-47024991	chr17	+	47024579	47024791	True	NM_023079,NM_007241	chr17,chr17	+,-	UBE2Z,SNF8	-38906,-2425
chr18:48404829-48405158	chr18	+	48404828	48405030	True	NM_001168335,NM_002396,NM_001127174	chr18,chr18,chr18	+,+,-	ME2,ME2,MRO	401,401,-53074
chr11:14995569-14995815	chr11	+	14995684	14995772	True	NM_000728,NM_001033953,NM_001033952,NM_001741	chr11,chr11,chr11,chr11	+,-,-,-	CALCB,CALCA,CALCA,CALCA	99373,-1852,-1852,-1852
chr8:72240249-72240600	chr8	+	72240380	72240556	True	NM_172058,NR_033652	chr8,chr8	-,+	EYA1,LOC100132891	28482,514801
chr7:102213568-102214223	chr7	+	102213567	102214223	True	NM_001166339,NM_001097615	chr7,chr7	+,-	SPDYE2L,POLR2J3	-21939,-499
chr7:102213568-102214223	chr7	+	44059293	44059355	False	NM_175064,NR_003655	chr7,chr7	+,-	SPDYE1,POLR2J4	-18855,-545
chr7:102213568-102214223	chr7	+	102119910	102119972	False	NM_006234,NM_152892	chr7,chr7	-,+	POLR2J,LRWD1	-529,-14571
chr7:102213568-102214223	chr7	+	102312640	102313295	False	NM_032959,NM_001166339	chr7,chr7	-,+	POLR2J2,SPDYE2L	-458,-21919
chr12:2943309-2943642	chr12	+	2943360	2943640	True	NM_018463,NM_031474	chr12,chr12	+,-	ITFG2,NRIP2	-21624,631
chr9:112203628-112204179	chr9	+	112203627	112203998	True	NM_001145369,NM_001145370,NM_001037293	chr9,chr9,chr9	-,-,+	PTPN3,PTPN3,PALM2	9725,9725,199069
chr22:24058343-24058959	chr22	+	24058354	24058988	True	NR_024448,NM_153615	chr22,chr22	-,+	LOC91316,RGL4	672,-25357
chr15:91426262-91426540	chr15	+	91426268	91426584	True	NM_002005,NM_001143783,NM_198527,NM_001143784,NM_001143785	chr15,chr15,chr15,chr15,chr15	+,+,-,+,+	FES,FES,HDDC3,FES,FES	1103,1691,49240,1691,1080
chrY:1469099-1469589	chrY	+	1469123	1469370	True	NM_001636,NR_026710,NR_026711	chrY,chrY,chrY	-,+,+	SLC25A6,ASMTL-AS1,ASMTL-AS1	-8084,53,53
chrY:1469099-1469589	chrX	+	1519123	1519370	False	NM_001636,NR_026710,NR_026711	chrX,chrX,chrX	-,+,+	SLC25A6,ASMTL-AS1,ASMTL-AS1	-8084,53,53
chr1:184019554-184020843	chr1	+	184019642	184020726	True	NM_052965,NR_023349,NM_015101,NM_001127394	chr1,chr1,chr1,chr1	+,+,-,+	TSEN15,TSEN15,GLT25D2,TSEN15	84,84,-12779,84
chr7:32536889-32537422	chr7	+	32536983	32537268	True	NM_012322,NM_001130710,NR_024466,NM_001139499,NM_015060	chr7,chr7,chr7,chr7,chr7	-,-,-,-,+	LSM5,LSM5,LSM5,LSM5,AVL9	-6960,-2113,-6508,-2113,-1870
chr20:37354011-37354584	chr20	+	37354073	37354567	True	NM_080552,NR_027241	chr20,chr20	+,-	SLC32A1,LOC388796	-1019,-290055
chr21:43824836-43825355	chr21	+	43824854	43825261	True	NM_018961,NM_024022,NM_032405,NM_001001895	chr21,chr21,chr21,chr21	+,-,-,+	UBASH3A,TMPRSS3,TMPRSS3,UBASH3A	-887,-8654,-8654,-887
chr19:49664881-49665334	chr19	+	49665190	49665286	True	NM_001195227,NM_017636,NM_002152	chr19,chr19,chr19	+,+,-	TRPM4,TRPM4,HRC	-4225,-4225,-6509
chr8:90915318-90916898	chr8	+	90915322	90916849	True	NM_004337,NM_002485,NM_001126111	chr8,chr8,chr8	+,-,+	OSGIN2,NBN,OSGIN2	-1277,80100,-611
chr1:165741355-165742446	chr1	+	165741751	165742361	True	NM_019026,NM_012474	chr1,chr1	-,+	TMCO1,UCK2	-3616,54370
chr1:171154800-171156121	chr1	+	171154799	171155978	True	NR_031627,NM_001460	chr1,chr1	-,+	MIR1295,FMO2	-83852,-462
chr1:154949749-154951219	chr1	+	154950053	154951176	True	NM_025207,NM_001202859,NM_001826,NR_036212,NM_001184892,NM_001184891,NR_024163,NM_001130041,NM_001130040,NM_183001,NM_201398,NM_003029	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,-,+,+,+,+,+,-,-,-,+,-	FLAD1,SHC1,CKS1B,MIR4258,FLAD1,FLAD1,CKS1B,SHC1,SHC1,SHC1,FLAD1,SHC1	4593,-3094,-2991,-1940,4593,4593,-2991,-3094,-6830,-6830,4593,-3094
chr9:98637044-98637350	chr9	+	98637047	98637391	True	NM_001010895,NR_023390,NR_023389	chr9,chr9,chr9	+,-,-	C9orf102,C9orf130,C9orf130	508,918,918
chr11:64579324-64579878	chr11	+	64579576	64579812	True	NM_004579,NM_006244,NM_130799,NM_000244,NM_130804,NM_130803,NM_130802,NM_130801,NM_130800	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,+,-,-,-,-,-,-,-	MAP4K2,PPP2R5B,MEN1,MEN1,MEN1,MEN1,MEN1,MEN1,MEN1	-8863,112330,-1388,-1388,-810,-810,-1363,-1541,-1541
chr11:66277786-66278039	chr11	+	66277798	66278082	True	NM_024649,NM_207340	chr11,chr11	+,-	BBS1,ZDHHC24	36,35639
chr2:91757979-91759493	chr2	+	91758534	91759166	True	NR_003503,NR_027238	chr2,chr2	+,-	GGT8P,LOC654342	204201,88859
chr18:72344506-72345349	chr18	+	72344543	72345395	True	NM_017757,NR_024484,NM_001146190,NM_001146189	chr18,chr18,chr18,chr18	+,-,+,+	ZNF407,LOC400657,ZNF407,ZNF407	-1675,-79472,-1675,-1675
chr2:68382792-68383201	chr2	+	68382879	68382959	True	NM_138458,NM_020143	chr2,chr2	-,+	WDR92,PNO1	1751,2045
chr4:106630194-106631468	chr4	+	106630274	106631392	True	NM_020395,NM_001031720,NM_024751,NM_001142471	chr4,chr4,chr4,chr4	-,+,+,-	INTS12,GSTCD,GSTCD,INTS12	-393,577,-384,-393
chr17:43140427-43141155	chr17	+	43140620	43140951	True	NM_021079,NM_024819	chr17,chr17	+,-	NMT1,DCAKD	-1999,-2147
chr14:35591069-35591431	chr14	+	35591106	35591478	True	NM_017917,NM_014672	chr14,chr14	-,+	PPP2R3C,KIAA0391	91,297
chr7:42276063-42276307	chr7	+	42276140	42276356	True	NM_000168,NR_027119	chr7,chr7	-,+	GLI3,LOC285954	312,-542645
chr2:190526089-190526376	chr2	+	190526090	190526360	True	NM_019048,NM_014585	chr2,chr2	+,-	ASNSD1,SLC40A1	-16,-80553
chrX:15855151-15856324	chrX	+	15855221	15856243	True	NM_005089,NM_003916	chrX,chrX	+,-	ZRSR2,AP1S2	-46704,16910
chr10:118350606-118351106	chr10	+	118350632	118351122	True	NM_006229,NM_144661	chr10,chr10	+,-	PNLIPRP1,C10orf82	-194,78409
chr1:32283652-32284633	chr1	+	32283668	32284500	True	NM_144569,NM_006559	chr1,chr1	-,+	SPOCD1,KHDRBS1	-2088,194990
chr7:126884999-126885234	chr7	+	126885055	126885273	True	NR_028041,NM_000845,NM_001127323,NM_001662	chr7,chr7,chr7,chr7	-,-,-,+	GRM8,GRM8,GRM8,ARF5	-1486,-1486,7209,343132
chr22:21339440-21340114	chr22	+	21339666	21340162	True	NM_001008695,NM_006767	chr22,chr22	-,+	THAP7,LZTR1	16292,-3159
chr8:73915525-73916525	chr8	+	73915819	73916399	True	NM_003218,NM_153225,NM_017489	chr8,chr8,chr8	+,-,+	TERF1,C8orf84,TERF1	4697,89161,4697
chr22:24576446-24576813	chr22	+	24576553	24576789	True	NM_001099781,NM_019601	chr22,chr22	-,+	GGT5,SUSD2	64371,654
chr16:433502-433737	chr16	+	433626	433758	True	NM_021259,NR_024453	chr16,chr16	-,+	TMEM8A,LOC100134368	-1676,-1437
chr13:113951121-113951345	chr13	+	113951147	113951333	True	NM_024719,NM_005561	chr13,chr13	-,+	GRTP1,LAMP1	67180,135
chrX:135225275-135226193	chrX	+	135225762	135226208	True	NM_001173517,NM_001449,NR_027621,NM_001159700,NM_001159703,NM_001159702	chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,+	MAP7D3,FHL1,FHL1,FHL1,FHL1,FHL1	107580,3350,2652,4528,3350,3350
chr1:47603203-47604137	chr1	+	47603423	47604053	True	NM_005764,NM_001010969	chr1,chr1	-,+	PDZK1IP1,CYP4A22	51768,-367
chr19:51144719-51145945	chr19	+	51145188	51145614	True	NM_032298,NM_001195076,NM_001160329,NM_001160328	chr19,chr19,chr19,chr19	-,+,-,-	SYT3,LOC342918,SYT3,SYT3	-3886,7087,-2096,-2096
chr12:22696207-22696634	chr12	+	22696296	22696650	True	NM_014802,NM_001039481	chr12,chr12	-,+	KIAA0528,ETNK1	852,81425
chr9:132405909-132406781	chr9	+	132405978	132406792	True	NM_014064,NM_017873,NM_001202403,NM_177999	chr9,chr9,chr9,chr9	+,-,-,-	METTL11A,ASB6,ASB6,ASB6	-17594,-1530,-1530,-1530
chr18:21978645-21979353	chr18	+	21978933	21979151	True	NM_080597,NM_018439	chr18,chr18	-,+	OSBPL1A,IMPACT	-1143,27457
chr10:122628918-122629540	chr10	+	122628940	122629289	True	NM_018117,NR_033850	chr10,chr10	+,-	WDR11,LOC283089	-18313,-18249
chr2:106468006-106468321	chr2	+	106468063	106468349	True	NM_025076,NM_001004720	chr2,chr2	-,+	UXS1,NCK2	342496,-31
chr6:150072913-150073877	chr6	+	150072957	150073915	True	NM_005389,NM_198887	chr6,chr6	+,-	PCMT1,NUP43	-2184,-5269
chr3:197477519-197477758	chr3	+	197477556	197477782	True	NM_032288,NM_001145642,NR_027840,NM_001011537	chr3,chr3,chr3,chr3	+,-,+,+	FYTTD1,KIAA0226,FYTTD1,FYTTD1	-983,-988,-346,-1183
chr3:128712933-128713531	chr3	+	128713058	128713546	True	NM_020741,NM_024768	chr3,chr3	-,+	KIAA1257,CCDC48	-72,6925
chr21:15654980-15656307	chr21	+	15655506	15656059	True	NR_003088,NR_003087,NM_198996	chr21,chr21,chr21	+,+,-	ABCC13,ABCC13,LIPI	-9447,-9447,-76252
chr7:155088761-155089140	chr7	+	155088811	155089003	True	NM_001103176,NM_005542,NM_198337,NM_198336	chr7,chr7,chr7,chr7	-,+,+,+	CNPY1,INSIG1,INSIG1,INSIG1	237586,482,482,482
chr17:30816052-30816455	chr17	+	30816057	30816390	True	NM_003885,NM_022344	chr17,chr17	+,-	CDK5R1,C17orf75	-2003,-146868
chr3:124449275-124449795	chr3	+	124449292	124449758	True	NM_002213,NR_033437,NR_033434,NM_000373	chr3,chr3,chr3,chr3	-,+,+,+	ITGB5,UMPS,UMPS,UMPS	156436,-130,-130,-130
chr9:95948973-95949364	chr9	+	95948999	95949365	True	NM_004148,NM_006648	chr9,chr9	-,+	NINJ1,WNK2	-52429,-1838
chr20:19189795-19191143	chr20	+	19189826	19191087	True	NR_024564,NM_020689	chr20,chr20	-,+	LOC100130264,SLC24A3	74206,2202
chrX:35973340-35975180	chrX	+	35973556	35974950	True	NM_152632,NM_031442	chrX,chrX	+,-	CXorf22,TMEM47	-35756,-1298151
chr5:39071599-39073293	chr5	+	39071793	39073331	True	NM_003999,NM_152756	chr5,chr5	+,-	OSMR,RICTOR	-225753,1220
chr11:55584068-55585520	chr11	+	55584120	55585362	True	NM_001001952,NM_001004738,NM_001004739,NM_001001960	chr11,chr11,chr11,chr11	+,+,+,-	OR5D18,OR5L1,OR5L2,OR5W2	1743,-5241,9332,96754
chr22:39411553-39411836	chr22	+	39411588	39411854	True	NM_014508,NM_175709,NM_152426	chr22,chr22,chr22	+,-,+	APOBEC3C,CBX7,APOBEC3D	-1374,136734,5263
chr9:140146811-140147145	chr9	+	140146869	140147157	True	NM_001004353,NM_015456,NM_001001710	chr9,chr9,chr9	+,+,-	C9orf173,COBRA1,FAM166A	-1190,2601,-4647
chr17:37960411-37961207	chr17	+	37960733	37961260	True	NM_012481,NM_198844	chr17,chr17	-,+	IKZF3,ZPBP2	59238,63194
chrX:102585781-102587442	chrX	+	102585821	102587453	True	NM_152278,NM_032621	chrX,chrX	+,-	TCEAL7,BEX2	-759,-19847
chr2:71438311-71439974	chr2	+	71438401	71439680	True	NM_005791,NM_020459	chr2,chr2	+,-	MPHOSPH10,PAIP2B	-81015,14604
chrX:17392924-17393234	chrX	+	17392959	17393195	True	NR_033348,NM_198270	chrX,chrX	-,+	RAI2,NHS	485802,347
chr17:56605201-56605466	chr17	+	56605204	56605502	True	NM_002876,NM_004687,NM_004574,NM_080415,NM_080416,NR_037156,NR_037155	chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,-,-,-,-	RAD51C,MTMR4,SEPT4,SEPT4,SEPT4,SEPT4,SEPT4	164460,-9953,1326,3991,3991,48,1326
chr2:219859304-219860826	chr2	+	219859547	219860578	True	NM_057093,NM_057094,NM_017521,NR_024385,NR_029867,NM_005209	chr2,chr2,chr2,chr2,chr2,chr2	-,-,-,+,-,-	CRYBA2,CRYBA2,FEV,LOC151300,MIR375,CRYBA2	-1420,-1420,-9168,-18592,5902,-1426
chr4:155412452-155412932	chr4	+	155412523	155412918	True	NM_001142552,NM_001142553,NM_001184741	chr4,chr4,chr4	-,-,+	DCHS2,DCHS2,FGB	10,63,71213
chr1:32231615-32232097	chr1	+	32231814	32232082	True	NM_001703,NR_036216,NM_001525	chr1,chr1,chr1	-,-,+	BAI2,MIR4254,HCRTR1	-2166,-7478,-148577
chrY:7140410-7140849	chrY	+	7140416	7140868	True	NR_028062,NM_001143	chrY,chrY	+,-	PRKY,AMELY	1144,-398348
chr15:49456869-49458281	chr15	+	49457042	49458330	True	NM_001001556,NM_001143887,NM_002044,NM_004236,NR_036507	chr15,chr15,chr15,chr15,chr15	+,-,+,-,+	GALK2,COPS2,GALK2,COPS2,LOC100306975	-9127,-9188,4091,-9188,-8608
chr12:6580008-6580214	chr12	+	6580023	6580193	True	NM_018009,NM_014231,NM_016830,NM_199245	chr12,chr12,chr12,chr12	+,-,-,-	TAPBPL,VAMP1,VAMP1,VAMP1	-18897,-180,-180,-180
chr20:39654470-39655640	chr20	+	39654641	39655671	True	NM_015035,NM_003286	chr20,chr20	-,+	ZHX3,TOP1	273118,1790
chr7:75723181-75724000	chr7	+	75723295	75724046	True	NM_005918,NM_016086	chr7,chr7	+,-	MDH2,STYXL1	-45960,-45974
chr11:64013374-64013840	chr11	+	64013427	64013831	True	NM_057092,NM_138689,NM_001184883,NM_004470,NM_000932,NM_001135208	chr11,chr11,chr11,chr11,chr11,chr11	+,-,+,+,+,+	FKBP2,PPP1R14B,PLCB3,FKBP2,PLCB3,FKBP2	-3890,632,5163,-5065,5163,-4874
chr19:39618408-39619041	chr19	+	39618570	39618916	True	NM_001014832,NM_001014831,NM_001014835,NM_001014834,NM_005884,NM_001080468	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,-	PAK4,PAK4,PAK4,PAK4,PAK4,SYCN	-2201,-2201,-2201,-2201,-2201,76040
chr20:30796230-30798229	chr20	+	30796244	30798083	True	NM_015352,NM_172236,NM_002657	chr20,chr20,chr20	+,+,-	POFUT1,POFUT1,PLAGL2	-599,-599,-698
chr21:47403598-47403871	chr21	+	47403707	47403767	True	NM_001848,NM_006657	chr21,chr21	+,-	COL6A1,FTCD	-2095,171764
chr6:28048872-28049369	chr6	+	28048882	28049287	True	NM_003447,NR_002936,NR_024063	chr6,chr6,chr6	+,-,+	ZNF165,LOC222699,ZSCAN12P1	-451,137470,9641
chr1:43856194-43856707	chr1	+	43856296	43856653	True	NM_001012961,NM_201542,NM_052877	chr1,chr1,chr1	+,-,-	C1orf84,MED8,MED8	-799,-813,-813
chr10:14817325-14818736	chr10	+	14817341	14818692	True	NM_031453,NM_016299	chr10,chr10	-,+	FAM107B,HSPA14	-445,61568
chr17:4644346-4645099	chr17	+	4644507	4645133	True	NM_001100812,NM_001001683,NM_032265,NM_022059,NM_001136046	chr17,chr17,chr17,chr17,chr17	-,+,+,-,+	CXCL16,MED11,ZMYND15,CXCL16,ZMYND15	-1284,-9835,-1221,-1284,-1239
chr3:11313199-11313907	chr3	+	11313274	11313906	True	NM_006395,NM_001144912,NM_001136031,NM_001128221	chr3,chr3,chr3,chr3	+,+,+,-	ATG7,ATG7,ATG7,VGLL4	103,103,103,296542
chr1:229411166-229411458	chr1	+	229411230	229411357	True	NM_145257,NM_004578	chr1,chr1	-,+	C1orf96,RAB4A	67390,-4415
chr1:32800238-32800609	chr1	+	32800449	32800518	True	NM_023009,NM_052841	chr1,chr1	-,+	MARCKSL1,TSSK3	1369,27343
chr14:103852830-103853988	chr14	+	103852834	103853619	True	NM_001128918,NM_001128919,NM_001823,NM_001128920,NM_001128921,NM_002376	chr14,chr14,chr14,chr14,chr14,chr14	+,+,-,+,+,+	MARK3,MARK3,CKB,MARK3,MARK3,MARK3	-1184,-1184,135608,-1184,-1184,-1184
chr8:144371131-144371478	chr8	+	144371133	144371337	True	NM_030895,NM_052963	chr8,chr8	+,-	ZNF696,TOP1MT	2221,45763
chr12:3858012-3858469	chr12	+	3858011	3858511	True	NM_001144958,NM_001144959,NM_032680,NM_019854	chr12,chr12,chr12,chr12	-,-,-,+	EFCAB4B,EFCAB4B,EFCAB4B,PRMT8	3905,3905,3905,-257637
chr16:25706214-25707339	chr16	+	25706252	25707355	True	NM_001012981,NM_006040	chr16,chr16	-,+	ZKSCAN2,HS3ST4	-437397,-2956
chr4:175442599-175443024	chr4	+	175442598	175442982	True	NM_000860,NR_036236,NR_027332,NM_001145816	chr4,chr4,chr4,chr4	-,+,-,-	HPGD,MIR4276,HPGD,HPGD	860,-97703,1112,860
chr16:30386163-30386708	chr16	+	30386229	30386439	True	NM_013292,NM_015527,NM_052838	chr16,chr16,chr16	+,-,-	MYLPF,TBC1D10B,SEPT1	-157,-4707,7782
chr5:177616842-177618221	chr5	+	177617722	177617980	True	NR_003281,NM_004499	chr5,chr5	-,+	GMCL1L,HNRNPAB	-3289,13527
chr7:148582356-148582725	chr7	+	148582434	148582588	True	NM_152998,NM_003592,NM_004456,NM_001203247,NM_001203248,NM_001203249	chr7,chr7,chr7,chr7,chr7,chr7	-,+,-,-,-,-	EZH2,CUL1,EZH2,EZH2,EZH2,EZH2	-993,-186552,-993,-993,-993,-1833
chr4:494848-495745	chr4	+	494884	495709	True	NM_001127178,NM_133474,NM_017733	chr4,chr4,chr4	+,-,+	PIGG,ZNF721,PIGG	-1946,-1442,-1946
chr1:228357863-228358410	chr1	+	228357862	228358398	True	NM_181465,NM_001010867	chr1,chr1	-,+	MRPL55,IBA57	-60849,-4484
chr19:14938687-14939494	chr19	+	14938747	14939285	True	NM_017506,NM_012377	chr19,chr19	-,+	OR7A5,OR7C2	43,113015
chr22:26868745-26869453	chr22	+	26868830	26869413	True	NM_152841,NM_001013694	chr22,chr22	-,+	HPS4,SRRD	6189,10436
chr7:30339689-30341021	chr7	+	30340087	30340792	True	NR_030319,NR_037513	chr7,chr7	+,-	MIR550A1,MIR550B1	-10738,-10581
chr13:43611210-43612850	chr13	+	43611298	43612532	True	NM_013238,NM_033255	chr13,chr13	+,-	DNAJC15,EPSTI1	-13992,-44921
chr3:108897856-108899478	chr3	+	108897861	108899237	True	NR_026767,NM_014429	chr3,chr3	+,-	C3orf66,MORC1	-907,-60868
chr4:89074361-89074765	chr4	+	89074528	89074804	True	NM_000297,NM_004827	chr4,chr4	+,-	PKD2,ABCG2	-145780,5257
chr16:326167-326395	chr16	+	326311	326412	True	NM_006849,NM_183337,NM_001176,NM_003834	chr16,chr16,chr16,chr16	+,-,+,-	PDIA2,RGS11,ARHGDIG,RGS11	6705,-397,4193,-397
chr9:107687903-107688813	chr9	+	107687968	107688859	True	NR_024011,NM_005502	chr9,chr9	+,-	LOC286367,ABCA1	-151393,1718
chr1:109939798-109940030	chr1	+	109939825	109939955	True	NM_001040709,NM_001205228,NM_002959	chr1,chr1,chr1	+,-,-	SYPL2,SORT1,SORT1	69144,-3846,664
chr2:64876437-64877004	chr2	+	64876447	64876925	True	NM_014755,NR_034023	chr2,chr2	-,+	SERTAD2,LOC339807	4171,-42052
chr12:27864067-27864383	chr12	+	27864186	27864432	True	NM_021821,NM_001146221,NM_001190864	chr12,chr12,chr12	+,-,+	MRPS35,LOC100287284,MRPS35	-531,59827,-531
chr1:226003248-226003502	chr1	+	226003249	226003544	True	NM_000120,NM_001136018,NM_014698	chr1,chr1,chr1	+,+,-	EPHX1,EPHX1,TMEM63A	9457,-5504,66926
chrX:40506297-40506614	chrX	+	40506309	40506499	True	NM_144970,NM_001195522	chrX,chrX	-,+	CXorf38,LOC347411	370,-23544
chr2:69608892-69610268	chr2	+	69609282	69610203	True	NM_002056,NR_036073	chr2,chr2	-,+	GFPT1,MIR3126	4236,-278519
chr6:125286439-125286782	chr6	+	125286759	125286821	True	NR_026876,NM_152553	chr6,chr6	-,+	STL,RNF217	-2586,17692
chr8:141467906-141468289	chr8	+	141467940	141468334	True	NM_001160372,NM_017444,NM_031466	chr8,chr8,chr8	-,+,-	TRAPPC9,CHRAC1,TRAPPC9	-79,53066,394
chr19:50669169-50669682	chr19	+	50669169	50669453	True	NM_001145809,NM_152358	chr19,chr19	+,-	MYH14,IZUMO2	37431,-2631
chr1:902651-903145	chr1	+	902688	903129	True	NM_015658,NM_198317,NM_001160184,NM_032129	chr1,chr1,chr1,chr1	-,+,+,+	NOC2L,KLHL17,PLEKHN1,PLEKHN1	-8009,-6772,-862,-862
chr15:90042060-90042466	chr15	+	90042088	90042294	True	NM_016321,NM_152259	chr15,chr15	-,+	RHCG,C15orf42	-2289,76523
chr19:18336075-18336522	chr19	+	18336093	18336377	True	NM_001098819,NM_001098818,NM_032683	chr19,chr19,chr19	-,-,+	PDE4C,PDE4C,MPV17L2	-790,921,-32104
chrY:4869232-4869743	chrY	+	4869302	4869791	True	NM_032971,NR_001540	chrY,chrY	+,-	PCDH11Y,TTTY23	-1086,1241910
chrY:4869232-4869743	chrX	+	91035350	91035633	False	NM_032967,NM_004538	chrX,chrX	+,-	PCDH11X,NAP1L3	-1141,1893104
chr14:21939698-21940128	chr14	+	21940116	21940182	True	NM_001163380,NM_032846,NM_014828,NR_028074	chr14,chr14,chr14,chr14	-,-,+,-	RAB2B,RAB2B,TOX4,RAB2B	4706,5006,5152,5006
chr1:165665382-165667120	chr1	+	165665398	165666868	True	NM_000696,NR_036683	chr1,chr1	-,+	ALDH9A1,LOC440700	1085,1118
chr20:30944731-30944952	chr20	+	30944782	30944975	True	NM_080616,NM_015338,NM_001164603	chr20,chr20,chr20	-,+,+	C20orf112,ASXL1,ASXL1	126364,1171,1171
chr2:218929648-218930200	chr2	+	218929697	218930203	True	NM_198483,NR_002712	chr2,chr2	+,-	RUFY4,CXCR2P1	3534,-3684
chr1:244996321-244996769	chr1	+	244996459	244996581	True	NR_026778,NM_198076	chr1,chr1	-,+	NCRNA00201,FAM36A	13714,2057
chr10:25305603-25305964	chr10	+	25305611	25305851	True	NM_145010,NM_024838	chr10,chr10	-,+	ENKUR,THNSL1	-581,-154
chr17:2495848-2496499	chr17	+	2496228	2496434	True	NM_000430,NM_024086	chr17,chr17	+,-	PAFAH1B1,METTL16	488,-81028
chr1:16087676-16088849	chr1	+	16087680	16088340	True	NM_001024215,NM_001024216,NM_001089591,NM_017556	chr1,chr1,chr1,chr1	+,+,-,+	FBLIM1,FBLIM1,UQCRHL,FBLIM1	2653,3118,45904,-2476
chr15:57547973-57548815	chr15	+	57548067	57548667	True	NM_207040,NR_015419	chr15,chr15	+,-	TCF12,LOC145783	-36463,-337370
chr16:765856-766219	chr16	+	765888	766130	True	NM_153350,NM_024042,NM_023933	chr16,chr16,chr16	-,+,+	FBXL16,METRN,FAM173A	-10063,-766,5027
chr17:7460730-7461297	chr17	+	7460785	7461319	True	NM_172087,NM_003808,NM_003809,NR_037926,NM_172089,NM_172088,NM_006942,NM_001198624,NM_015670,NM_001198623,NM_001198622,NR_037146	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,+,-,+,+,+,+,+	TNFSF13,TNFSF13,TNFSF12,SENP3-EIF4A1,TNFSF12-TNFSF13,TNFSF13,SOX15,TNFSF13,SENP3,TNFSF13,TNFSF13,TNFSF12	289,289,-8461,3989,-8461,289,32219,289,3989,289,289,-8461
chr14:24396954-24398426	chr14	+	24397009	24398336	True	NR_024081,NM_021004	chr14,chr14	-,+	C14orf165,DHRS4	5498,24628
chr4:39698230-39698971	chr4	+	39698430	39698978	True	NM_005339,NM_174921,NM_001111112,NM_001111113	chr4,chr4,chr4,chr4	+,-,+,+	UBE2K,C4orf34,UBE2K,UBE2K	685,-57949,685,685
chr9:79087871-79088658	chr9	+	79088064	79088705	True	NM_001097635,NM_018339	chr9,chr9	+,-	GCNT1,RFK	4551,-78620
chr20:3869328-3869699	chr20	+	3869345	3869615	True	NM_024960,NM_153638,NM_153640,NR_031722	chr20,chr20,chr20,chr20	+,+,+,-	PANK2,PANK2,PANK2,MIR103-2AS	-2,126,847,28645
chr19:12271055-12271968	chr19	+	12271084	12272007	True	NM_003437,NR_037801,NR_037802,NM_145233	chr19,chr19,chr19,chr19	+,-,-,-	ZNF136,ZNF625,ZNF625-ZNF20,ZNF625	1864,-3538,-3538,-3538
chr5:37248525-37248752	chr5	+	37248581	37248653	True	NM_018034,NM_023073	chr5,chr5	+,-	WDR70,C5orf42	130758,927
chr7:6685547-6686114	chr7	+	6685731	6686121	True	NM_017560,NM_006956	chr7,chr7	+,-	ZNF853,ZNF12	-30255,60495
chr8:145700950-145701172	chr8	+	145700969	145701037	True	NM_003923,NM_145754,NM_001129888	chr8,chr8,chr8	-,+,-	FOXH1,KIFC2,CYHR1	731,-9282,-9938
chr2:173287144-173288125	chr2	+	173287186	173288157	True	NR_026995,NM_000210,NM_001079818	chr2,chr2,chr2	-,+,+	LOC91149,ITGA6,ITGA6	312828,4156,4156
chr19:37409007-37409706	chr19	+	37409386	37409697	True	NM_001037232,NM_001171979,NM_001204838,NM_001204839,NM_198539,NM_001204835,NM_001204836,NM_001204837	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,+,+,+,+,+,+	ZNF829,ZNF829,ZNF568,ZNF568,ZNF568,ZNF568,ZNF568,ZNF568	-2193,-2463,-2213,-2213,-2213,-2213,-2213,-2213
chr8:77595092-77595293	chr8	+	77595172	77595242	True	NR_024360,NM_024721	chr8,chr8	-,+	LOC100192378,ZFHX4	318,-1715
chr17:33759810-33760206	chr17	+	33759873	33760206	True	NR_003037,NM_018042	chr17,chr17	+,-	SNORD7,SLFN12	140469,-330
chr9:42019614-42021426	chr9	+	42019714	42021394	True	NR_003670,NM_001012421	chr9,chr9	-,+	KGFLP2,ANKRD20A2	-130,346908
chr9:42019614-42021426	chr9	-	46685647	46687327	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-3054917,238
chr9:42019614-42021426	chr9	-	44243900	44243957	False	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	-613170,-559073
chr9:42019614-42021426	chr9	-	41952597	41952957	False	NR_015363,NM_001012421	chr9,chr9	-,+	MGC21881,ANKRD20A2	2176,415345
chr7:144056209-144057015	chr7	+	144056251	144057007	True	NM_005435,NM_001080413	chr7,chr7	+,-	ARHGEF5,NOBOX	-3820,43829
chr7:144056209-144057015	chr7	-	143888264	143888969	False	NM_001003702,NM_198495	chr7,chr7	-,+	ARHGEF35,CTAGE4	3879,-7767
chr7:144056209-144057015	chr7	-	143986849	143987555	False	NR_002158,NR_033942,NR_002157	chr7,chr7,chr7	+,-,+	OR2A20P,LOC728377,OR2A9P	8910,-3753,9058
chr16:68573674-68574919	chr16	+	68573809	68574571	True	NM_133458,NM_018667	chr16,chr16	+,-	ZFP90,SMPD3	-199,-91400
chr9:99145155-99145679	chr9	+	99145166	99145598	True	NM_007001,NM_014282	chr9,chr9	-,+	SLC35D2,HABP4	444,66815
chr12:52778735-52779177	chr12	+	52778750	52779176	True	NM_033045,NM_002284	chr12,chr12	-,+	KRT84,KRT86	291,-83153
chr6:5086079-5086303	chr6	+	5086084	5086246	True	NM_001145115,NR_037462	chr6,chr6	+,-	PPP1R3G,MIR3691	-415,62360
chr2:133105697-133106792	chr2	+	133105696	133106835	True	NM_001508,NR_027020	chr2,chr2	+,-	GPR39,ANKRD30BL	67311,-90154
chr17:21196101-21196502	chr17	+	21196187	21196478	True	NM_152914,NM_145109,NM_002756	chr17,chr17,chr17	-,+,+	C17orf103,MAP2K3,MAP2K3	-39609,-8270,-4890
chr1:226113370-226114038	chr1	+	226113630	226113929	True	NM_000120,NM_013328	chr1,chr1	+,-	EPHX1,PYCR2	-100691,-1665
chr12:51422644-51423582	chr12	+	51422685	51423580	True	NM_000617,NM_001174128,NM_001174129,NM_001174125,NM_001174126,NM_001174127,NM_001024668,NR_033422,NR_033421	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,-,-,-,-,-,+,-,-	SLC11A2,SLC11A2,SLC11A2,SLC11A2,SLC11A2,SLC11A2,LETMD1,SLC11A2,SLC11A2	-2486,-2486,-2761,-627,-2486,-2486,18503,-2486,-2486
chr2:36584199-36584521	chr2	+	36584305	36584538	True	NR_037631,NM_016441	chr2,chr2	-,+	LOC100288911,CRIM1	-1592,-986
chr22:38970178-38971187	chr22	+	38970181	38971002	True	NM_001002880,NM_007068	chr22,chr22	+,-	CBY1,DMC1	81655,-3992
chrX:71460375-71461520	chrX	+	71460690	71461165	True	NM_001170747,NM_017669	chrX,chrX	+,-	PIN4,ERCC6L	-59219,-1832
chr2:239010700-239011246	chr2	+	239010745	239011163	True	NM_194312,NM_030768	chr2,chr2	+,-	ESPNL,ILKAP	-1845,101211
chr2:217499160-217499389	chr2	+	217499194	217499400	True	NM_000597,NM_000599	chr2,chr2	+,-	IGFBP2,IGFBP5	-1124,60922
chr14:70344645-70345059	chr14	+	70344653	70344965	True	NM_001034852,NM_003049,NM_022137	chr14,chr14,chr14	+,-,+	SMOC1,SLC10A1,SMOC1	1148,-80647,1148
chr6:34758295-34758547	chr6	+	34758337	34758410	True	NM_017754,NM_024294	chr6,chr6	+,-	UHRF1BP1,C6orf106	1383,-93712
chr14:93390046-93390475	chr14	+	93390125	93390515	True	NM_005606,NM_001275	chr14,chr14	-,+	LGMN,CHGA	-175078,-731
chr16:15736511-15736839	chr16	+	15736549	15736715	True	NM_001143979,NM_001184998,NM_014647,NR_030159,NM_001184999,NM_017668	chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,+,-,+	NDE1,KIAA0430,KIAA0430,MIR484,KIAA0430,NDE1	408,358,358,435,358,7367
chr6:41128038-41128804	chr6	+	41128110	41128758	True	NM_018965,NR_026938,NM_178174	chr6,chr6,chr6	-,+,-	TREM2,LOC221442,TREML1	2214,-59388,-6040
chr11:111410958-111411574	chr11	+	111410984	111411514	True	NM_178834,NM_017589	chr11,chr11	+,-	LAYN,BTG4	-18,-27920
chr3:62792061-62793639	chr3	+	62792221	62793510	True	NR_027104,NM_003716	chr3,chr3	+,-	LOC285401,CADPS	294853,67613
chr11:70050084-70050433	chr11	+	70050176	70050422	True	NM_003824,NM_005247	chr11,chr11	+,-	FADD,FGF3	-958,-415984
chr2:73339387-73339619	chr2	+	73339464	73339578	True	NM_015470,NM_001134462	chr2,chr2	-,+	RAB11FIP5,NOTO	618,89807
chr9:27106800-27108797	chr9	+	27106998	27108832	True	NM_000459,NM_022901	chr9,chr9	+,-	TEK,LRRC19	314,-101307
chr18:18818199-18819047	chr18	+	18818206	18818994	True	NM_005406,NM_001142966	chr18,chr18	-,+	ROCK1,GREB1L	-126394,3208
chr2:43306473-43307156	chr2	+	43306495	43307131	True	NR_027251,NM_006887	chr2,chr2	+,-	LOC100129726,ZFP36L2	147218,146664
chr21:38832798-38833940	chr21	+	38832842	38833966	True	NM_006052,NM_001396	chr21,chr21	-,+	DSCR3,DYRK1A	-193009,-40297
chr10:99504555-99504804	chr10	+	99504564	99504780	True	NM_001002261,NM_001002262,NM_001174120,NM_001174119,NM_001174121,NM_001174122,NM_144588,NR_026754	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,+,+,-	ZFYVE27,ZFYVE27,ZFYVE27,ZFYVE27,ZFYVE27,ZFYVE27,ZFYVE27,LOC100270710	-6381,-7737,-7737,-7737,-7737,-7737,-7737,-26662
chr1:234613691-234614069	chr1	+	234613690	234614032	True	NM_001012985,NM_005646	chr1,chr1	+,-	C1orf31,TARBP1	-104312,867
chr6:160200984-160202726	chr6	+	160201080	160202466	True	NR_002965,NM_001008897,NM_014161,NM_030752,NR_002960	chr6,chr6,chr6,chr6,chr6	-,-,+,-,-	SNORA29,TCP1,MRPL18,TCP1,SNORA20	4350,8320,9025,8320,73
chr16:11035351-11035632	chr16	+	11035388	11035624	True	NM_014015,NM_015226	chr16,chr16	-,+	DEXI,CLEC16A	683,2720
chr11:57300949-57302449	chr11	+	57301125	57301817	True	NM_012456,NM_001105565	chr11,chr11	-,+	TIMM10,SMTNL1	-2893,8296
chr7:57204421-57205409	chr7	+	57204527	57205392	True	NM_033273,NR_036102	chr7,chr7	-,+	ZNF479,MIR3147	2243,267338
chr7:45793768-45794592	chr7	+	45794168	45794600	True	NR_024271,NM_000596	chr7,chr7	-,+	SEPT7P2,IGFBP1	14077,133358
chr7:45793768-45794592	chr11	+	50249333	50249394	False	NR_024504,NR_003034	chr11,chr11	+,-	LOC646813,LOC441601	118923,8300
chr13:41884660-41885369	chr13	+	41884846	41885182	True	NM_001110798,NM_004294,NM_018527,NM_024561	chr13,chr13,chr13,chr13	+,-,+,+	NAA16,MTRF1,NAA16,NAA16	158,-47133,158,158
chr1:207117539-207118737	chr1	+	207117835	207118421	True	NM_002644,NM_006850	chr1,chr1	-,+	PIGR,IL24	1440,-47098
chr7:19785330-19786594	chr7	+	19785399	19786533	True	NM_152774,NM_002214	chr7,chr7	-,+	TMEM196,ITGB8	25932,584191
chr18:19996168-19996643	chr18	+	19996208	19996590	True	NM_172241,NM_005257	chr18,chr18	-,+	CTAGE1,GATA6	1339,-246843
chr19:58087098-58087838	chr19	+	58087120	58087836	True	NM_001010879,NM_017879	chr19,chr19	+,-	ZIK1,ZNF416	7791,2459
chr6:149805965-149807099	chr6	+	149805971	149807067	True	NM_207360,NM_138785	chr6,chr6	-,+	ZC3H12D,C6orf72	29,80460
chr19:47975406-47976086	chr19	+	47975493	47975721	True	NM_014681,NM_015063	chr19,chr19	+,-	DHX34,SLC8A2	-123006,-186
chr1:115632421-115632621	chr1	+	115632421	115632501	True	NM_000549,NM_005725	chr1,chr1	+,-	TSHB,TSPAN2	-60057,-300
chr4:170541807-170542024	chr4	+	170541834	170542073	True	NM_001199398,NM_001199399,NM_001829,NM_001199397,NM_012224,NM_173872,NM_001199400	chr4,chr4,chr4,chr4,chr4,chr4,chr4	-,-,+,-,-,+,-	NEK1,NEK1,CLCN3,NEK1,NEK1,CLCN3,NEK1	-8056,-8056,-163,-8056,-8056,-163,-8056
chr9:103956955-103958863	chr9	+	103957091	103958874	True	NM_001127610,NM_017753	chr9,chr9	-,+	BAAT,LPPR1	186984,-9833
chr1:65616470-65616682	chr1	+	65616475	65616629	True	NM_203464,NM_001005353,NM_013410,NR_029516	chr1,chr1,chr1,chr1	+,+,+,-	AK4,AK4,AK4,MIR101-1	-3294,-3013,-2676,-92284
chr5:33944840-33946001	chr5	+	33944995	33945900	True	NM_016568,NM_016180	chr5,chr5	+,-	RXFP3,SLC45A2	-8555,38930
chr7:127232192-127233572	chr7	+	127232569	127233591	True	NM_024523,NM_020369,NM_001662	chr7,chr7,chr7	-,+,+	GCC1,FSCN3,ARF5	-6915,97,-4214
chr19:14316883-14317098	chr19	+	14316893	14317061	True	NM_014921,NR_024282,NM_001008701	chr19,chr19,chr19	-,+,-	LPHN1,LOC113230,LPHN1	-14,-133123,-14
chr9:127631963-127632175	chr9	+	127632099	127632215	True	NM_007209,NM_030978	chr9,chr9	-,+	RPL35,ARPC5L	-7859,-666
chr3:16939626-16939978	chr3	+	16939636	16939995	True	NM_001144382,NM_001351	chr3,chr3	+,-	PLCL2,DAZL	-13236,-292630
chr4:8158650-8159229	chr4	+	8158654	8159182	True	NM_001130083,NM_001130087,NM_001130086,NM_001130085,NM_001130084,NM_001130088,NM_032432,NM_018986	chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4	-,-,-,-,-,-,-,+	ABLIM2,ABLIM2,ABLIM2,ABLIM2,ABLIM2,ABLIM2,ABLIM2,SH3TC1	1427,1427,1427,1427,1427,1427,1427,41877
chr18:56701702-56702004	chr18	+	56701721	56701903	True	NR_024021,NM_013435	chr18,chr18	+,-	LOC390858,RAX	1067,238782
chr3:171178348-171178578	chr3	+	171178435	171178589	True	NM_015028,NM_001164436,NR_027767,NM_001161566,NM_001161564,NM_001161565,NM_001161562,NM_001161563,NM_001161560,NM_001161561	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-,-,-,-,-	TNIK,TMEM212,TNIK,TNIK,TNIK,TNIK,TNIK,TNIK,TNIK,TNIK	-238,382549,-238,-238,-238,-238,-238,-238,-238,-238
chr19:10045711-10046451	chr19	+	10045724	10046358	True	NM_058164,NM_015725	chr19,chr19	-,+	OLFM2,RDH8	762,77566
chr21:16438275-16438971	chr21	+	16438294	16438856	True	NM_003489,NM_013396	chr21,chr21	-,+	NRIP1,USP25	-1168,663639
chr5:115909219-115909479	chr5	+	115909250	115909514	True	NM_020796,NM_016144	chr5,chr5	-,+	SEMA6A,COMMD10	1087,-488574
chr15:40401175-40401704	chr15	+	40401188	40401678	True	NM_001003943,NM_001003942,NM_001003940,NM_001211,NM_033503	chr15,chr15,chr15,chr15,chr15	-,-,-,+,-	BMF,BMF,BMF,BUB1B,BMF	-2901,-2901,-113,51531,-2549
chr14:65879706-65879952	chr14	+	65879748	65879838	True	NM_178155,NM_178154,NR_024334,NM_004480,NM_178156	chr14,chr14,chr14,chr14,chr14	+,+,-,+,+	FUT8,FUT8,LOC645431,FUT8,FUT8	-1959,-264,-413,-264,-1959
chr19:39616645-39617101	chr19	+	39616695	39617079	True	NM_001014832,NM_001014831,NM_001014835,NM_001014834,NM_005884,NM_001080468	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,-	PAK4,PAK4,PAK4,PAK4,PAK4,SYCN	-326,-326,-326,-326,-326,77877
chr15:34271564-34273550	chr15	+	34271936	34273130	True	NM_012125,NM_020371	chr15,chr15	+,-	CHRM5,AVEN	-10900,58223
chr5:53746615-53747069	chr5	+	53746615	53746909	True	NM_006308,NM_019087	chr5,chr5	+,-	HSPB3,ARL15	4521,-140212
chr7:75024020-75024358	chr7	+	75024201	75024351	True	NM_198853,NM_198924,NR_003614	chr7,chr7,chr7	+,+,-	TRIM74,TRIM73,PMS2L2	551,551,-35986
chr7:75024020-75024358	chr7	-	72440545	72440695	False	NR_033323,NR_003602	chr7,chr7	-,+	NSUN5P2,LOC541473	-15243,-404
chr7:75024020-75024358	chr7	-	72742635	72742773	False	NM_001135211,NM_003602,NM_178125	chr7,chr7,chr7	+,+,-	FKBP6,FKBP6,TRIM50	-531,-386,-550
chr12:50135880-50136229	chr12	+	50135917	50136205	True	NM_001098576,NM_198900,NM_003217	chr12,chr12,chr12	+,-,+	TMBIM6,FMNL3,TMBIM6	-376,-34720,-675
chr12:51476223-51476563	chr12	+	51476226	51476604	True	NM_030809,NM_015416	chr12,chr12	-,+	CSRNP2,LETMD1	779,-34193
chr1:100591157-100591640	chr1	+	100591264	100591694	True	NM_019083,NM_194292	chr1,chr1	+,-	CCDC76,SASS6	7011,6875
chr14:102823641-102824765	chr14	+	102823832	102824730	True	NM_001177612,NM_001177611,NM_032630,NM_014844,NM_001172631	chr14,chr14,chr14,chr14,chr14	-,-,-,+,+	CINP,CINP,CINP,TECPR2,TECPR2	4573,4371,4573,4569,4569
chr1:113499729-113500803	chr1	+	113499916	113500660	True	NM_003051,NR_002796,NM_001166496	chr1,chr1,chr1	-,+,-	SLC16A1,AKR7A2P1,SLC16A1	-941,-34002,-1231
chr14:21979608-21979870	chr14	+	21979646	21979772	True	NM_014828,NM_019852	chr14,chr14	+,-	TOX4,METTL3	-34362,-189
chr1:197317765-197319084	chr1	+	197318132	197318901	True	NM_201253,NM_194314	chr1,chr1	+,-	CRB1,ZBTB41	-80856,-148460
chr19:20150240-20150873	chr19	+	20150245	20150725	True	NM_033196,NM_007138,NM_001077349	chr19,chr19,chr19	-,+,-	ZNF682,ZNF90,ZNF682	32,38077,-181
chr14:88740372-88741210	chr14	+	88740441	88741036	True	NM_001040428,NM_138318	chr14,chr14	+,-	SPATA7,KCNK10	110951,-3186
chr2:79740340-79740646	chr2	+	79740473	79740625	True	NM_001164883,NM_004389,NR_036231	chr2,chr2,chr2	+,+,-	CTNNA2,CTNNA2,MIR4264	-464,-464,135910
chr10:50822959-50823316	chr10	+	50823059	50823351	True	NM_000124,NM_020984,NM_001142934,NM_001142933,NM_001142929,NM_020549,NM_003055,NM_020985,NM_020986	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,+,+,+,+,+,+,+,+	ERCC6,CHAT,CHAT,CHAT,CHAT,CHAT,SLC18A3,CHAT,CHAT	-75912,-5969,-1027,-1027,-1027,-1027,-4763,-1956,-1956
chr18:22931996-22932207	chr18	+	22932068	22932138	True	NM_015461,NM_001025096	chr18,chr18	-,+	ZNF521,PSMA8	126,781677
chr16:84851068-84852212	chr16	+	84851086	84851989	True	NM_001145548,NM_031476	chr16,chr16	-,+	ZDHHC7,CRISPLD2	193202,1597
chr14:23282522-23282922	chr14	+	23282663	23282775	True	NM_178336,NM_001126105,NM_003982,NM_001126106	chr14,chr14,chr14,chr14	+,-,-,-	MRPL52,SLC7A7,SLC7A7,SLC7A7	16316,2347,2347,6289
chr17:40078486-40080355	chr17	+	40078995	40079851	True	NM_031421,NM_198830,NM_001096	chr17,chr17,chr17	+,-,-	TTC25,ACLY,ACLY	7036,-3723,-3723
chr6:27860257-27860779	chr6	+	27860311	27860645	True	NM_003514,NM_003527,NM_003535	chr6,chr6,chr6	-,+,-	HIST1H2AM,HIST1H2BO,HIST1H3J	368,557,-1741
chr8:97517821-97518705	chr8	+	97517992	97518638	True	NM_015942,NM_002998	chr8,chr8	-,+	MTERFD1,SDC2	-244196,-12167
chr13:22177404-22177866	chr13	+	22177403	22177835	True	NM_152726,NM_002010	chr13,chr13	-,+	EFHA1,FGF9	570,67379
chr4:185747731-185748588	chr4	+	185747900	185748514	True	NM_152683,NM_001995	chr4,chr4	+,-	CCDC111,ACSL1	-177184,-685
chr4:183957357-183958051	chr4	+	183957436	183958046	True	NR_024008,NR_003612	chr4,chr4	-,+	C4orf38,FAM92A3	62356,771
chrX:152594332-152594694	chrX	+	152594621	152594733	True	NM_001080485,NM_004988	chrX,chrX	+,-	ZNF275,MAGEA1	4879,-108505
chr1:94909927-94910469	chr1	+	94910041	94910469	True	NM_002858,NM_001178096	chr1,chr1	+,-	ABCD3,F3	-26164,96994
chr16:23653026-23653343	chr16	+	23653060	23653218	True	NM_001199011,NM_032486,NR_037573,NM_001199743,NM_024675	chr16,chr16,chr16,chr16,chr16	+,+,+,+,-	DCTN5,DCTN5,DCTN5,DCTN5,PALB2	-424,-424,-424,-424,-382
chr18:53255585-53256291	chr18	+	53255679	53256311	True	NM_003199,NM_001083962,NM_004163	chr18,chr18,chr18	-,-,+	TCF4,TCF4,RAB27B	11,11,-759898
chr15:83674837-83675425	chr15	+	83675147	83675216	True	NR_027649,NM_031452,NR_027650,NM_001160114,NM_001160115,NM_001160116,NM_001160113,NM_144597	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,+,-,-,-,-,-,-	C15orf40,FAM103A1,C15orf40,C15orf40,C15orf40,C15orf40,C15orf40,C15orf40	5232,-20211,5232,5232,5232,5232,5232,5232
chr10:75397588-75398555	chr10	+	75397597	75398047	True	NM_021245,NM_004922	chr10,chr10	-,+	MYOZ1,SEC24C	3518,106083
chr13:21751219-21751781	chr13	+	21751306	21751602	True	NM_001166017,NM_145061,NM_024026	chr13,chr13,chr13	-,-,+	SKA3,SKA3,MRP63	-565,-565,-985
chr1:236275338-236275631	chr1	+	236275384	236275650	True	NM_002508,NM_003272	chr1,chr1	-,+	NID1,GPR137B	-46903,30181
chr7:5461741-5462183	chr7	+	5461756	5462219	True	NM_001080495,NM_153247	chr7,chr7	-,+	TNRC18,SLC29A4	1008,-139246
chr22:19035100-19036588	chr22	+	19035197	19036577	True	NR_024157,NR_026651	chr22,chr22	-,+	DGCR11,DGCR10	127,-25111
chr2:231247475-231249271	chr2	+	231247595	231249293	True	NM_001185015,NM_003113	chr2,chr2	-,+	SP110,SP100	-157151,31577
chr7:30949967-30950237	chr7	+	30949976	30950242	True	NM_001202481,NM_198098	chr7,chr7	-,+	CRHR2,AQP1	-210257,1172
chr20:31259874-31260655	chr20	+	31260404	31260616	True	NR_034152,NM_182584	chr20,chr20	+,-	LOC149950,C20orf203	-85179,-20621
chr14:92504142-92505997	chr14	+	92504328	92505862	True	NM_004239,NM_017437	chr14,chr14	-,+	TRIP11,CPSF2	591,82435
chr14:21740057-21740531	chr14	+	21740189	21740287	True	NM_001077443,NM_001077442,NM_020366,NM_004500,NM_031314	chr14,chr14,chr14,chr14,chr14	-,-,+,-,-	HNRNPC,HNRNPC,RPGRIP1,HNRNPC,HNRNPC	-2551,-2551,15848,-2551,-2551
chr9:112297054-112297552	chr9	+	112297109	112297583	True	NM_002829,NM_001037293	chr9,chr9	-,+	PTPN3,PALM2	-36516,105484
chr10:75487093-75488967	chr10	+	75487423	75488918	True	NR_026592,NM_004922	chr10,chr10	-,+	BMS1P4,SEC24C	1413,15212
chr10:75487093-75488967	chr10	-	81665754	81665813	False	NR_033857,NM_003019	chr10,chr10	+,-	LOC100288974,SFTPD	-1160,43107
chr12:6862572-6862839	chr12	+	6862712	6862888	True	NM_005439,NR_026581,NM_002824	chr12,chr12,chr12	-,-,+	MLF2,MLF2,PTMS	-630,-76,12652
chr10:86008182-86009360	chr10	+	86008221	86009079	True	NM_001012720,NM_001012722,NM_015613,NM_002921	chr10,chr10,chr10,chr10	+,+,-,+	RGR,RGR,LRIT1,RGR	-3463,-3463,-7004,-3463
chr5:154318778-154319241	chr5	+	154319127	154319270	True	NM_001014990,NM_015465,NM_014180	chr5,chr5,chr5	+,-,+	MRPL22,GEMIN5,MRPL22	1362,-1351,1362
chrX:41305986-41306205	chrX	+	41306011	41306193	True	NM_022567,NM_001126054	chrX,chrX	+,-	NYX,CASK	519,476148
chr16:1357014-1358745	chr16	+	1357518	1358616	True	NM_194261,NM_194260,NM_001001410,NM_003345,NM_194259	chr16,chr16,chr16,chr16,chr16	+,+,-,+,+	UBE2I,UBE2I,C16orf42,UBE2I,UBE2I	563,744,43307,1021,1021
chr5:173315994-173317636	chr5	+	173316089	173317579	True	NM_030627,NM_138369	chr5,chr5	+,-	CPEB4,BOD1	-810,-272423
chr8:86093389-86093724	chr8	+	86093469	86093576	True	NM_001099670,NM_001951,NM_001083588,NM_001083589	chr8,chr8,chr8,chr8	-,+,+,+	C8orf59,E2F5,E2F5,E2F5	39126,-3917,-3917,6333
chr4:57842135-57842702	chr4	+	57842234	57842700	True	NM_032313,NM_000938	chr4,chr4	-,+	C4orf14,POLR2B	1176,2408
chr3:169485445-169485993	chr3	+	169485475	169486021	True	NR_001566,NM_001185118,NR_033703,NR_033702,NM_018657,NM_032487,NM_001185119	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,+,+,+,-,+	TERC,MYNN,MYNN,MYNN,MYNN,ARPM1,MYNN	-2627,4831,4831,4831,4831,1712,6031
chr21:35899583-35901442	chr21	+	35899753	35901471	True	NM_053277,NM_203418	chr21,chr21	+,-	CLIC6,RCAN1	140216,-492
chr4:15936918-15937901	chr4	+	15936961	15937933	True	NM_005130,NM_001775	chr4,chr4	-,+	FGFBP1,CD38	2088,-157088
chr9:120175323-120175647	chr9	+	120175479	120175601	True	NM_138554,NM_014010	chr9,chr9	+,-	TLR4,ASTN2	290858,1766
chr14:75997752-75999231	chr14	+	75997762	75999246	True	NM_006399,NM_007176	chr14,chr14	+,-	BATF,C14orf1	-9029,128342
chr2:169316083-169317854	chr2	+	169316089	169317844	True	NM_203463,NM_013233	chr2,chr2	+,-	LASS6,STK39	-3305,-211984
chr1:151343579-151345141	chr1	+	151343903	151345159	True	NM_002796,NM_003944	chr1,chr1	+,-	PSMB4,SELENBP1	26881,55
chr1:222792384-222792588	chr1	+	222792485	222792607	True	NM_198551,NM_005681	chr1,chr1	+,-	MIA3,TAF1A	-1098,-29210
chr14:89018408-89019304	chr14	+	89018633	89019344	True	NM_207660,NM_001160104,NM_001160103,NM_007039,NM_024824	chr14,chr14,chr14,chr14,chr14	+,+,+,-,+	ZC3H14,ZC3H14,ZC3H14,PTPN21,ZC3H14	9908,9908,9908,1831,9908
chr14:61190192-61190399	chr14	+	61190195	61190381	True	NM_017420,NM_001177963	chr14,chr14	-,+	SIX4,MNAT1	521,11077
chr19:12409102-12409404	chr19	+	12409268	12409444	True	NM_003437,NM_001164276,NM_016264	chr19,chr19,chr19	+,-,-	ZNF136,ZNF44,ZNF44	-135447,-3554,-3554
chr5:140557424-140559204	chr5	+	140558283	140558959	True	NM_019120,NM_020957,NM_031947,NM_019119,NM_018940	chr5,chr5,chr5,chr5,chr5	+,+,-,+,+	PCDHB8,PCDHB16,SLC25A2,PCDHB9,PCDHB7	-905,2020,124703,7933,-6092
chr1:149813423-149813839	chr1	+	149813444	149813777	True	NM_001040874,NM_001005464,NM_003548,NR_036461,NM_001034077,NM_003516,NM_021059	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,+,-,+,-,-	HIST2H2AA4,HIST2H3A,HIST2H4A,HIST2H2BC,HIST2H4B,HIST2H2AA3,HIST2H3C	591,-679,-9274,8613,-9274,591,-679
chr1:149813423-149813839	chr1	-	149823168	149823501	False	NM_001040874,NM_001005464,NM_003548,NR_036461,NM_001034077,NM_003516,NM_021059	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,-,-,+,+	HIST2H2AA4,HIST2H3A,HIST2H4A,HIST2H2BC,HIST2H4B,HIST2H2AA3,HIST2H3C	-591,679,9274,-828,9274,-591,679
chr9:21992791-21993498	chr9	+	21993133	21993491	True	NM_058195,NR_003529	chr9,chr9	-,+	CDKN2A,CDKN2B-AS1	1049,1298
chr12:53445197-53445579	chr12	+	53445201	53445559	True	NM_198316,NM_170754,NM_015319,NR_033854	chr12,chr12,chr12,chr12	+,+,+,-	TENC1,TENC1,TENC1,LOC283335	-4442,-1417,-2519,2713
chr17:80372800-80373081	chr17	+	80372998	80373094	True	NM_173620,NM_175902,NR_033265,NM_024648	chr17,chr17,chr17,chr17	+,-,-,-	HEXDC,C17orf101,C17orf101,C17orf101	3157,3469,3469,3469
chr18:2565132-2565790	chr18	+	2565643	2565772	True	NM_006101,NM_022840	chr18,chr18	+,-	NDC80,METTL4	5737,5778
chr1:92703043-92703644	chr1	+	92703311	92703491	True	NM_053274,NM_001012425	chr1,chr1	-,+	GLMN,C1orf146	61129,-19793
chrY:14450399-14451152	chrY	+	14450748	14451038	True	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	323259,82401
chr6:74077696-74079388	chr6	+	74077740	74079057	True	NM_001080507,NM_001017361	chr6,chr6	-,+	OOEP,C6orf221	508,-5391
chr19:22014455-22015472	chr19	+	22014748	22015414	True	NR_024523,NM_003423	chr19,chr19	+,-	LOC641367,ZNF43	-81258,3608
chr19:14145485-14146178	chr19	+	14146148	14146216	True	NM_004843,NM_001145028,NM_080864	chr19,chr19,chr19	+,-,+	IL27RA,PALM3,RLN3	-3937,23805,-7182
chr9:70971684-70971934	chr9	+	70971804	70971872	True	NR_015423,NM_021965	chr9,chr9	-,+	LOC572558,PGM5	935,-40
chr11:47618299-47619749	chr11	+	47619284	47619642	True	NM_001164379,NM_031909	chr11,chr11	+,-	FAM180B,C1QTNF4	-11112,-3323
chr14:65440632-65441079	chr14	+	65440642	65440926	True	NM_002028,NM_198686	chr14,chr14	+,-	FNTB,RAB15	12580,-1767
chr7:17075619-17077284	chr7	+	17075918	17077257	True	NM_176813,NM_001621	chr7,chr7	-,+	AGR3,AHR	-154305,261018
chr11:1939723-1940239	chr11	+	1939816	1940211	True	NM_001042782,NM_001042780,NM_001042781,NR_036185,NM_006757	chr11,chr11,chr11,chr11,chr11	+,+,+,-,+	TNNT3,TNNT3,TNNT3,MIR4298,TNNT3	587,587,587,-59050,587
chr16:66957249-66957600	chr16	+	66957411	66957581	True	NM_003869,NM_001204746,NM_001204744,NM_001204745,NM_001128850,NM_004165,NM_004062	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,-,-,-,-	CES2,CDH16,CDH16,CDH16,RRAD,RRAD,CDH16	10765,-4524,-4524,-4524,1908,1908,-4524
chr2:231262513-231263555	chr2	+	231262572	231263360	True	NM_001185015,NM_003113	chr2,chr2	-,+	SP110,SP100	-172128,17510
chr8:57301698-57303221	chr8	+	57301943	57303261	True	NM_006211,NM_024300	chr8,chr8	-,+	PENK,CHCHD7	55384,-177679
chr20:35374645-35375339	chr20	+	35374653	35375047	True	NM_032013,NM_080628,NM_022477	chr20,chr20,chr20	-,+,-	NDRG3,C20orf118,NDRG3	-172,129522,-172
chr10:102756010-102756535	chr10	+	102756151	102756567	True	NM_001163812,NM_001163813,NM_001163814,NM_032112,NM_021830,NM_176794,NM_176793,NM_176792,NM_032429	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,-,+,-,-,-,+	C10orf2,C10orf2,C10orf2,MRPL43,C10orf2,MRPL43,MRPL43,MRPL43,LZTS2	-8909,-8909,-8909,-8879,-8909,-8879,-8879,-8879,296
chr21:36419618-36419919	chr21	+	36419630	36419696	True	NR_024351,NR_026812,NM_001754	chr21,chr21,chr21	+,-,-	NCRNA00160,C21orf96,RUNX1	-323576,-7907,1949
chr14:105955877-105956429	chr14	+	105956021	105956441	True	NM_001311,NM_001519,NM_001198983,NM_001134876,NM_001134877,NM_001134875	chr14,chr14,chr14,chr14,chr14,chr14	+,-,+,+,+,+	CRIP1,BRF1,C14orf80,C14orf80,C14orf80,C14orf80	-2815,-188692,10,1144,78,1144
chr6:137543116-137543353	chr6	+	137543273	137543400	True	NM_000416,NM_001008783	chr6,chr6	-,+	IFNGR1,SLC35D3	-2706,-299927
chr12:13103898-13105199	chr12	+	13104121	13105191	True	NM_018654,NR_030345	chr12,chr12	-,+	GPRC5D,MIR614	-803,-35409
chr20:48184005-48184205	chr20	+	48184066	48184156	True	NM_015266,NM_000961	chr20,chr20	+,-	SLC9A8,PTGIS	245093,601
chr7:150329484-150330432	chr7	+	150329495	150330038	True	NM_024711,NM_015660,NR_024115	chr7,chr7,chr7	-,+,-	GIMAP6,GIMAP2,GIMAP6	59,52755,59
chr10:61471959-61472243	chr10	+	61472084	61472257	True	NM_194298,NM_001143774	chr10,chr10	-,+	SLC16A9,PHYHIPL	-2435,-534908
chr16:56702651-56703386	chr16	+	56702676	56703284	True	NR_003669,NM_005950,NM_005951	chr16,chr16,chr16	+,-,+	MT1IP,MT1G,MT1H	6364,-699,441
chr6:7388190-7388467	chr6	+	7388284	7388462	True	NM_205864,NM_031480,NM_001170692,NM_001170693	chr6,chr6,chr6,chr6	-,+,-,-	CAGE1,RIOK1,CAGE1,CAGE1	1530,1599,1530,1530
chr11:15128664-15129667	chr11	+	15128967	15129623	True	NM_001042536,NM_001741,NM_001031853	chr11,chr11,chr11	+,-,+	INSC,CALCA,INSC	6860,-135135,4346
chr5:179245577-179245850	chr5	+	179245771	179245845	True	NM_014275,NM_003900	chr5,chr5	-,+	MGAT4B,SQSTM1	-11819,1996
chr3:184038790-184039073	chr3	+	184038822	184039100	True	NM_004953,NM_198244,NM_198242,NM_198241,NM_001194946,NM_001194947,NM_001171087,NR_003055,NM_182917	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,+,+,-,+,+	EIF4G1,EIF4G1,EIF4G1,EIF4G1,EIF4G1,EIF4G1,CLCN2,SNORD66,EIF4G1	-772,-6590,-6590,-6590,-6590,-6590,40341,4383,-5921
chr17:4899080-4899562	chr17	+	4899298	4899370	True	NM_001171168,NM_015099,NM_001167986,NM_001167987,NM_006612,NM_001167985,NM_001171167,NM_001171166,NM_213726	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,+,-,-,-,-	CAMTA2,CAMTA2,INCA1,INCA1,KIF1C,INCA1,CAMTA2,CAMTA2,INCA1	-8633,-8338,1585,1585,1872,1585,-8633,-8338,1585
chrX:135860931-135861557	chrX	+	135860932	135861490	True	NM_004840,NM_000074	chrX,chrX	-,+	ARHGEF6,CD40LG	2063,-130655
chr4:4390358-4390560	chr4	+	4390404	4390552	True	NM_017816,NM_014392,NM_001040101	chr4,chr4,chr4	-,+,+	LYAR,D4S234E,D4S234E	-98508,-2472,-2472
chr5:74630826-74632446	chr5	+	74630896	74632493	True	NM_000859,NM_001130996,NM_001164443	chr5,chr5,chr5	+,+,-	HMGCR,HMGCR,ANKRD31	499,499,-98193
chr11:125459669-125460273	chr11	+	125459947	125460113	True	NM_001612,NM_152713	chr11,chr11	-,+	ACRV1,STT3A	90738,2625
chr10:119845346-119846682	chr10	+	119846177	119846652	True	NM_014904,NR_026940	chr10,chr10	-,+	RAB11FIP2,CASC2	-40063,-39909
chr8:70983074-70983351	chr8	+	70983081	70983321	True	NM_024504,NM_001128206	chr8,chr8	-,+	PRDM14,SULF1	291,-578113
chr3:11610367-11611051	chr3	+	11610478	11611000	True	NM_006395,NM_001128221	chr3,chr3	+,-	ATG7,VGLL4	-296519,-80
chr10:99474824-99475388	chr10	+	99474859	99475429	True	NR_026754,NM_031484	chr10,chr10	-,+	LOC100270710,MARVELD1	2523,-1445
chr11:71937583-71938141	chr11	+	71937629	71938171	True	NM_001113534,NM_005169,NM_001567,NM_000803,NM_001113535,NM_001113536	chr11,chr11,chr11,chr11,chr11,chr11	+,-,+,+,+,+	FOLR2,PHOX2A,INPPL1,FOLR2,FOLR2,FOLR2	-9868,17099,-1805,-9868,-9868,-9868
chr3:48593728-48594002	chr3	+	48593835	48593965	True	NM_033629,NM_004567,NM_033199	chr3,chr3,chr3	+,-,-	TREX1,PFKFB4,UCN2	-86657,312,7286
chr19:53972168-53973184	chr19	+	53972639	53973205	True	NR_002938,NM_001004301	chr19,chr19	-,+	LOC284379,ZNF813	133596,-1701
chr11:35441425-35441676	chr11	+	35441508	35441651	True	NM_014344,NM_004171,NM_001195728	chr11,chr11,chr11	+,-,-	FJX1,SLC1A2,SLC1A2	198083,-403,24
chrX:138529219-138529777	chrX	+	138529316	138529796	True	NR_028597,NM_001171877	chrX,chrX	+,-	SRD5A1P1,MCF2	-389,195254
chr22:39094919-39095833	chr22	+	39095028	39095722	True	NM_014876,NM_004286	chr22,chr22	-,+	JOSD1,GTPBP1	789,6084
chr18:44089702-44091627	chr18	+	44089730	44091654	True	NM_001173129,NM_152470,NM_001145473	chr18,chr18,chr18	-,+,-	LOXHD1,RNF165,LOXHD1	7445,-175594,7445
chr19:55865669-55866059	chr19	+	55865749	55866048	True	NM_144613,NM_032701,NM_001145402	chr19,chr19,chr19	-,+,-	COX6B2,SUV420H2,FAM71E2	184,-14579,8622
chr12:107380856-107381469	chr12	+	107380860	107381519	True	NM_025198,NM_001033050,NM_152261	chr12,chr12,chr12	-,-,+	MTERFD3,MTERFD3,C12orf23	69,69,-31367
chr22:51019299-51020195	chr22	+	51019711	51020203	True	NM_001145137,NM_001145136,NM_001145135,NM_001145134,NR_021492,NM_005198,NM_152245,NR_027928,NM_004377,NM_152246	chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,+,-,-,-,-,-	CPT1B,CPT1B,CPT1B,CPT1B,LOC100144603,CHKB,CPT1B,CHKB-CPT1B,CPT1B,CPT1B	-3205,-2615,-2615,-2615,1251,1275,-2615,1275,-2817,-2817
chr8:33877301-33878741	chr8	+	33877530	33878723	True	NM_032509,NM_024025	chr8,chr8	+,-	MAK16,DUSP26	-534903,-420091
chr22:43809050-43809326	chr22	+	43809170	43809322	True	NM_173050,NM_001044370	chr22,chr22	-,+	SCUBE1,MPPED1	-69815,-1201
chr9:71789616-71790242	chr9	+	71789633	71790241	True	NM_001170630,NM_201629,NM_002732,NM_004817	chr9,chr9,chr9,chr9	+,+,-,+	TJP2,TJP2,PRKACG,TJP2	-713,-713,-160594,-713
chrX:153657546-153658547	chrX	+	153657745	153658366	True	NM_001009934,NM_001493,NM_001183	chrX,chrX,chrX	-,+,+	DNASE1L1,GDI1,ATP6AP1	-17318,6892,-820
chr3:186542334-186542771	chr3	+	186542340	186542662	True	NM_181573,NM_001177800	chr3,chr3	-,+	RFC4,ADIPOQ	-17856,17800
chr1:13743467-13743982	chr1	+	13743552	13743612	True	NM_001100114,NM_001099852,NM_001099850	chr1,chr1,chr1	+,+,-	PRAMEF21,PRAMEF20,PRAMEF18	-801,-6696,-45147
chr1:13743467-13743982	chr1	+	13522713	13522773	False	NM_001100114,NM_001099852,NM_001099850	chr1,chr1,chr1	+,+,-	PRAMEF21,PRAMEF20,PRAMEF18	-801,-6698,-45144
chrX:152955261-152955919	chrX	+	152955345	152955877	True	NM_001039582,NM_001142806,NM_005629,NM_001142805	chrX,chrX,chrX,chrX	-,+,+,+	PNCK,SLC6A8,SLC6A8,SLC6A8	-15529,-430,-1644,-1644
chr19:19627889-19629202	chr19	+	19627904	19629007	True	NM_032037,NM_015965	chr19,chr19	-,+	TSSK6,NDUFA13	-1435,-941
chr20:23730819-23731104	chr20	+	23730923	23731103	True	NM_001898,NR_001279	chr20,chr20	-,+	CST1,CSTT	521,-231191
chr2:113511316-113513010	chr2	+	113511477	113512809	True	NM_152515,NM_005415	chr2,chr2	-,+	CKAP2L,SLC20A1	9495,-108101
chrX:65825447-65827378	chrX	+	65825524	65827017	True	NM_001199689,NM_014799	chrX,chrX	-,+	EDA2R,HEPH	31926,-441467
chr3:150151716-150152855	chr3	+	150152213	150152721	True	NM_014445,NM_014779	chr3,chr3	-,+	SERP1,TSC22D2	111769,-25486
chr17:25407779-25409546	chr17	+	25408194	25409460	True	NM_015626,NM_000625	chr17,chr17	+,-	WSB1,NOS2	211645,718152
chr14:70882122-70882878	chr14	+	70882352	70882894	True	NM_001202548,NM_001202549,NM_001202547,NM_003813,NM_018373	chr14,chr14,chr14,chr14,chr14	-,-,-,+,-	SYNJ2BP-COX16,SYNJ2BP-COX16,SYNJ2BP-COX16,ADAM21,SYNJ2BP	963,963,963,41322,963
chr3:129828314-129830079	chr3	+	129828438	129829846	True	NM_001136152,NR_024252	chr3,chr3	+,-	ALG1L2,LOC729375	-27815,480
chr14:98663709-98664253	chr14	+	98663719	98664251	True	NR_015430,NM_182560	chr14,chr14	-,+	C14orf64,C14orf177	-219258,513698
chr9:101570392-101570732	chr9	+	101570442	101570757	True	NM_173551,NM_024642	chr9,chr9	-,+	ANKS6,GALNT12	-11648,-512
chr19:52149744-52150048	chr19	+	52149814	52150088	True	NR_029843,NM_001098612	chr19,chr19	+,-	MIR99B,SIGLEC14	45776,94
chr19:52149744-52150048	chr19	+	52133390	52133664	False	NM_007147,NM_003830	chr19,chr19	+,-	ZNF175,SIGLEC5	-58910,113
chr5:140262570-140263209	chr5	+	140262569	140263085	True	NM_031865,NM_031864,NM_002109,NM_018903,NM_018904	chr5,chr5,chr5,chr5,chr5	+,+,-,+,+	PCDHA13,PCDHA12,HARS,PCDHA12,PCDHA13	-766,-7689,-191598,-7689,-766
chr12:6929223-6930667	chr12	+	6929300	6930630	True	NM_014262,NM_031299,NM_019858,NM_014449	chr12,chr12,chr12,chr12	+,-,+,+	LEPREL2,CDCA3,GPR162,GPR162	6941,29876,332,332
chr9:35677792-35678063	chr9	+	35677796	35678048	True	NM_001216,NM_213674	chr9,chr9	+,-	CA9,TPM2	-3932,12055
chr10:23984418-23984625	chr10	+	23984447	23984585	True	NM_153714,NM_001098500	chr10,chr10	-,+	C10orf67,KIAA1217	-350675,-823
chr13:41238552-41238778	chr13	+	41238589	41238771	True	NM_002015,NM_014252	chr13,chr13	-,+	FOXO1,SLC25A15	2013,124775
chr17:42784634-42786018	chr17	+	42784782	42785978	True	NM_145663,NM_144609,NM_025104,NR_036623	chr17,chr17,chr17,chr17	+,-,+,+	DBF4B,CCDC43,DBF4B,DBF4B	-3,-17617,-3,-3
chr1:82267463-82267677	chr1	+	82267480	82267666	True	NM_012302,NM_024686	chr1,chr1	+,-	LPHN2,TTLL7	-1449,2197217
chr9:33001644-33002119	chr9	+	33001678	33001968	True	NM_001195254,NR_036577,NM_001195252,NM_175073,NM_001195250,NR_036579,NM_001195251,NM_001195248,NM_001195249,NM_175069,NM_001539,NR_036578,NR_036576	chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,-,-,-,-,-,-,-,-,-,+,-,-	APTX,APTX,APTX,APTX,APTX,APTX,APTX,APTX,APTX,APTX,DNAJA1,APTX,APTX	-68,-39,-39,-39,-39,-104,-39,-39,-104,-39,23240,-68,-39
chr18:77443916-77444144	chr18	+	77443923	77444193	True	NM_001202504,NM_048368,NM_004715,NM_001146343	chr18,chr18,chr18,chr18	+,+,+,-	CTDP1,CTDP1,CTDP1,PQLC1	-2550,-4179,-4179,267510
chr5:18046875-18048207	chr5	+	18046901	18048239	True	NR_033975,NM_006317	chr5,chr5	-,+	LOC401177,BASP1	-659482,-829203
chr1:38479680-38480853	chr1	+	38479748	38480651	True	NM_004468,NM_016037	chr1,chr1	-,+	FHL3,UTP11L	-8514,-1415
chr5:175844283-175845360	chr5	+	175844299	175845166	True	NM_001834,NM_007097,NM_138820	chr5,chr5,chr5	-,-,+	CLTB,CLTB,HIGD2A	-759,-759,-28566
chr17:7466445-7466791	chr17	+	7466514	7466838	True	NM_001416,NM_172087,NM_003808,NR_037926,NM_172088,NM_006942,NM_001198624,NM_015670,NM_001204510,NM_001198623,NM_001198622	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,-,+,+,+,+,+	EIF4A1,TNFSF13,TNFSF13,SENP3-EIF4A1,TNFSF13,SOX15,TNFSF13,SENP3,EIF4A1,TNFSF13,TNFSF13	9185,-4956,-4956,-1256,-4956,26700,-4956,-1256,9185,-4956,-4956
chr17:17138011-17138909	chr17	+	17138786	17138926	True	NM_144997,NM_020201,NM_144606	chr17,chr17,chr17	-,+,-	FLCN,NT5M,FLCN	1626,67753,1626
chr19:31839358-31839565	chr19	+	31839399	31839565	True	NM_020856,NR_026894	chr19,chr19	-,+	TSHZ3,DKFZp566F0947	675,-198667
chr11:61099505-61099784	chr11	+	61099538	61099832	True	NM_001923,NM_015533	chr11,chr11	-,+	DDB1,DAK	884,821
chr11:66314601-66315691	chr11	+	66314913	66315653	True	NM_001104,NM_207340	chr11,chr11	+,-	ACTN3,ZDHHC24	-573,-1242
chr7:142961186-142961390	chr7	+	142961191	142961267	True	NM_001143680,NM_001143681,NM_001143679,NM_015917,NM_014690	chr7,chr7,chr7,chr7,chr7	+,+,+,+,-	GSTK1,GSTK1,GSTK1,GSTK1,FAM131B	-720,-720,-720,-720,97956
chr5:63801299-63801705	chr5	+	63801320	63801710	True	NM_001029875,NM_173829	chr5,chr5	+,-	RGS7BP,SREK1IP1	741,262844
chr9:19249082-19249409	chr9	+	19249127	19249255	True	NR_038064,NM_017925	chr9,chr9	-,+	PLIN2,DENND4C	-121523,41493
chr5:57759519-57761008	chr5	+	57760732	57760952	True	NM_006622,NM_152687	chr5,chr5	-,+	PLK2,GAPT	-4819,26377
chr17:80187969-80188431	chr17	+	80187972	80188442	True	NM_001042423,NM_001042422,NM_004207,NM_198082	chr17,chr17,chr17,chr17	+,+,+,-	SLC16A3,SLC16A3,SLC16A3,CCDC57	1701,-1730,-1134,-17283
chr1:36928861-36929413	chr1	+	36928903	36929431	True	NM_024676,NM_031280	chr1,chr1	+,-	SH3D21,MRPS15	-156253,659
chr14:35898891-35899132	chr14	+	35899012	35899116	True	NM_032594,NM_020529	chr14,chr14	+,-	INSM2,NFKBIA	104131,-25052
chr16:434254-434575	chr16	+	434337	434583	True	NM_021259,NR_024453	chr16,chr16	-,+	TMEM8A,LOC100134368	-2387,-2147
chr3:186382950-186383904	chr3	+	186383180	186383942	True	NM_000412,NM_001134415	chr3,chr3	+,-	HRG,TBCCD1	74,-94848
chr4:111558986-111559581	chr4	+	111559103	111559615	True	NM_153426,NM_153427,NM_001977,NM_001204399,NM_001204398,NM_001204397	chr4,chr4,chr4,chr4,chr4,chr4	-,-,+,-,-,-	PITX2,PITX2,ENPEP,PITX2,PITX2,PITX2	3714,3714,-161925,3714,3714,3714
chr22:50637328-50637699	chr22	+	50637453	50637648	True	NM_031454,NM_020461	chr22,chr22	+,-	SELO,TUBGCP6	1759,45802
chr4:68815499-68816317	chr4	+	68815803	68816324	True	NM_001114387,NR_015446	chr4,chr4	-,+	TMPRSS11A,FTLP10	12965,231685
chr11:63684760-63684960	chr11	+	63684898	63684960	True	NM_024771,NM_173587	chr11,chr11	+,-	NAA40,RCOR2	21481,-582
chr2:74778354-74779509	chr2	+	74778408	74779467	True	NM_001197260,NM_001381,NM_032603	chr2,chr2,chr2	+,+,-	DOK1,DOK1,LOXL3	-2312,2044,1646
chr19:18669006-18669324	chr19	+	18669110	18669358	True	NM_001171949,NM_001171948,NM_012181,NM_024069	chr19,chr19,chr19,chr19	+,+,-,+	C19orf50,C19orf50,FKBP8,C19orf50	-589,-589,-14727,-589
chr2:169927496-169928614	chr2	+	169927713	169928662	True	NM_199204,NM_003742,NM_001142271,NM_001142270,NM_005771	chr2,chr2,chr2,chr2,chr2	+,-,+,+,+	DHRS9,ABCB11,DHRS9,DHRS9,DHRS9	-4235,-39880,8954,422,-6481
chr9:133884079-133884358	chr9	+	133884092	133884306	True	NM_001145106,NM_006059	chr9,chr9	-,+	FIBCD1,LAMC3	-69637,197
chr17:39842543-39843399	chr17	+	39842713	39843315	True	NM_005801,NR_033415	chr17,chr17	+,-	EIF1,KRT42P	1811,-46262
chr4:56215496-56216325	chr4	+	56215542	56216240	True	NR_037969,NM_024592	chr4,chr4	-,+	LOC100506462,SRD5A3	35568,-3214
chr10:105727413-105728817	chr10	+	105727752	105728493	True	NM_024928,NM_014720	chr10,chr10	-,+	OBFC1,SLK	-49707,-335
chr10:88275461-88276562	chr10	+	88275941	88276355	True	NM_015045,NM_001030015	chr10,chr10	-,+	WAPAL,OPN4	5236,137958
chr19:58990406-58990928	chr19	+	58990434	58990958	True	NM_012254,NM_017908	chr19,chr19	-,+	SLC27A5,ZNF446	32524,-2690
chr13:36858586-36859609	chr13	+	36858619	36859277	True	NM_001198910,NM_001111046	chr13,chr13	-,+	C13orf38-SOHLH2,CCNA1	12771,146689
chr2:130904744-130906185	chr2	+	130905434	130906226	True	NM_207310,NR_033903	chr2,chr2	-,+	CCDC74B,LOC285103	-2803,-18299
chrX:80066310-80067953	chrX	+	80066508	80067750	True	NM_152630,NM_003022,NM_153252	chrX,chrX,chrX	+,+,-	FAM46D,SH3BGRL,BRWD3	-390620,389552,-1275
chr8:73919774-73920557	chr8	+	73919773	73920535	True	NM_003218,NM_153225,NM_017489	chr8,chr8,chr8	+,-,+	TERF1,C8orf84,TERF1	561,85022,561
chr8:57026732-57027299	chr8	+	57026797	57027347	True	NM_005372,NM_001011667	chr8,chr8	-,+	MOS,CHCHD7	-256,96967
chr20:3141710-3142682	chr20	+	3141786	3142703	True	NM_014731,NM_014948,NM_199415,NM_021826,NM_033453	chr20,chr20,chr20,chr20,chr20	-,-,-,-,+	ProSAPiP1,UBOX5,UBOX5,FASTKD5,ITPA	6554,-1246,-1246,-1254,47352
chr11:65627636-65627915	chr11	+	65627645	65627821	True	NM_025128,NM_005507	chr11,chr11	+,-	MUS81,CFL1	50,-1841
chr19:46714632-46714832	chr19	+	46714631	46714771	True	NR_027003,NM_207393	chr19,chr19	+,-	DKFZp434J0226,IGFL3	-1183,-86700
chr11:57007464-57008467	chr11	+	57007484	57008396	True	NM_001005210,NM_005161,NR_027991	chr11,chr11,chr11	+,-,-	LRRC55,APLNR,APLNR	-58322,-2557,-2557
chr20:61147874-61148128	chr20	+	61147881	61148159	True	NR_033263,NR_029780,NM_178463	chr20,chr20,chr20	-,+,+	C20orf200,MIR1-1,C20orf166	659,3353,-272
chr7:100822094-100822330	chr7	+	100822282	100822346	True	NM_198571,NM_001283	chr7,chr7	-,+	C7orf52,AP1S1	1261,-24647
chr10:4722584-4723061	chr10	+	4722591	4722972	True	NR_024475,NR_015425	chr10,chr10	-,+	LOC100216001,LOC338588	-2329,-24296
chr1:6527552-6528055	chr1	+	6527649	6527939	True	NM_148967,NM_001039664,NM_003790,NM_031475,NM_148970,NM_148966,NM_148965	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,-,-	TNFRSF25,TNFRSF25,TNFRSF25,ESPN,TNFRSF25,TNFRSF25,TNFRSF25	-1394,-1394,-1394,-42852,-1394,-1394,-1394
chr1:51565066-51566814	chr1	+	51565717	51566531	True	NM_001136508,NM_007051	chr1,chr1	+,-	C1orf185,FAF1	1374,-139781
chr16:32938144-32938609	chr16	+	32938296	32938658	True	NR_003083,NM_016212	chr16,chr16	-,+	SLC6A10P,TP53TG3	-41833,266321
chr16:32938144-32938609	chr16	+	31995056	31995106	False	NR_002827,NM_003414	chr16,chr16	-,+	HERC2P4,ZNF267	168818,-110028
chr16:32938144-32938609	chr16	-	33728957	33729319	False	NR_033866,NM_001205265	chr16,chr16	-,+	LOC390705,TP53TG3B	-430255,-466888
chr7:150974619-150975584	chr7	+	150974650	150975284	True	NM_001003802,NR_030407,NM_003078	chr7,chr7,chr7	-,+,-	SMARCD3,MIR671,SMARCD3	-830,-39194,-419
chr15:59978734-59978935	chr15	+	59978790	59978946	True	NM_004751,NM_004330	chr15,chr15	+,-	GCNT3,BNIP2	-74867,2750
chr10:6358628-6359556	chr10	+	6358759	6359561	True	NM_004566,NM_000417	chr10,chr10	+,-	PFKFB3,IL2RA	-113970,-254426
chr1:52094178-52094643	chr1	+	52094297	52094691	True	NR_036662,NM_001981	chr1,chr1	+,-	OSBPL9,EPS15	-11808,-109302
chr14:95942457-95942825	chr14	+	95942507	95942841	True	NM_016417,NM_152592	chr14,chr14	+,-	GLRX5,C14orf49	58481,-334
chr2:234261859-234262375	chr2	+	234261976	234262386	True	NM_018218,NM_152879	chr2,chr2	-,+	USP40,DGKD	211900,766
chr5:37836818-37837051	chr5	+	37836883	37837026	True	NM_152403,NM_000514,NM_001190469,NM_001190468,NM_199231	chr5,chr5,chr5,chr5,chr5	+,-,-,-,-	EGFLAM,GDNF,GDNF,GDNF,GDNF	421506,2806,-954,-954,-1290
chr5:96289615-96290608	chr5	+	96289641	96290237	True	NM_001198541,NM_175920	chr5,chr5	-,+	ERAP1,LNPEP	-139793,3918
chr15:93632752-93633276	chr15	+	93632768	93633252	True	NM_001166287,NM_020211,NR_036136	chr15,chr15,chr15	-,-,+	RGMA,RGMA,MIR3175	-1016,-325,-185190
chrX:71496013-71496639	chrX	+	71496066	71496680	True	NM_001170747,NM_001007	chrX,chrX	+,-	PIN4,RPS4X	-94592,511
chr3:196243892-196245535	chr3	+	196244159	196245525	True	NM_001105573,NM_001077657	chr3,chr3	+,-	FBXO45,C3orf43	50199,-1922
chr21:43528159-43528381	chr21	+	43528163	43528327	True	NM_173568,NR_027243	chr21,chr21	+,-	UMODL1,C21orf128	-36788,367
chr20:23807734-23809504	chr20	+	23807971	23809551	True	NM_001322,NR_001279	chr20,chr20	-,+	CST2,CSTT	-659,-308239
chr2:166881388-166883352	chr2	+	166881588	166882975	True	NM_024969,NM_001165963	chr2,chr2	+,-	CSRNP3,SCN1A	-452802,47234
chr12:49660135-49660351	chr12	+	49660236	49660362	True	NM_001008223,NM_032704	chr12,chr12	-,+	C1QL4,TUBA1C	70661,-1425
chr6:167529794-167530264	chr6	+	167529848	167530286	True	NM_005299,NM_031409,NM_004367	chr6,chr6,chr6	-,+,+	GPR31,CCR6,CCR6	41083,5954,-4605
chr13:36871672-36871967	chr13	+	36871767	36871945	True	NM_001144981,NM_001144983,NM_001144982,NM_001144985,NM_001144984,NM_001144986,NM_001198908,NM_001111046,NM_001198910	chr13,chr13,chr13,chr13,chr13,chr13,chr13,chr13,chr13	-,-,-,-,-,-,-,+,-	C13orf38,C13orf38,C13orf38,C13orf38,C13orf38,C13orf38,C13orf38,CCNA1,C13orf38-SOHLH2	97,97,97,97,97,97,97,134021,97
chr16:30125582-30125944	chr16	+	30125591	30125651	True	NR_027081,NM_024307,NM_002746,NM_001040056,NM_001109891	chr16,chr16,chr16,chr16,chr16	+,-,-,-,-	LOC100271831,GDPD3,MAPK3,MAPK3,MAPK3	-209,-713,9029,9029,9029
chr1:245131517-245131910	chr1	+	245131553	245131705	True	NR_026587,NR_026586,NR_026588,NM_001143943,NM_032328,NM_031844	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-	EFCAB2,EFCAB2,EFCAB2,EFCAB2,EFCAB2,HNRNPU	1925,1578,1925,1925,1465,-103726
chr13:24886055-24886947	chr13	+	24886221	24886775	True	NM_178540,NM_006437	chr13,chr13	+,-	C1QTNF9,PARP4	-2556,200229
chr15:72525100-72525512	chr15	+	72525355	72525511	True	NM_182471,NM_182470,NM_002654,NM_145204	chr15,chr15,chr15,chr15	-,-,-,+	PKM2,PKM2,PKM2,SENP8	-1671,-1671,-1671,-114788
chr4:174101524-174102903	chr4	+	174101791	174102936	True	NM_017423,NM_001130689	chr4,chr4	+,-	GALNT7,HMGB2	-11946,152044
chr7:5112715-5113274	chr7	+	5112830	5113222	True	NR_015343,NR_034163	chr7,chr7	+,-	LOC389458,ZNF890P	-1191,71005
chr21:46827556-46828411	chr21	+	46827568	46828386	True	NM_130445,NR_028082	chr21,chr21	+,-	COL18A1,NCRNA00175	-2522,16619
chr9:127538398-127538917	chr9	+	127538515	127538956	True	NM_001489,NM_033334,NM_182487	chr9,chr9,chr9	-,-,+	NR6A1,NR6A1,OLFML2A	-4939,-4939,480
chr11:20593208-20594540	chr11	+	20594205	20594477	True	NM_001029865,NM_004211	chr11,chr11	-,+	DBX1,SLC6A5	-412335,26468
chr2:54482713-54482939	chr2	+	54482731	54482979	True	NM_001003937,NM_001100396	chr2,chr2	-,+	TSPYL6,C2orf73	480,75091
chr17:62403882-62404202	chr17	+	62404066	62404242	True	NM_000442,NM_001085423	chr17,chr17	-,+	PECAM1,C17orf60	2891,57326
chr3:147126442-147126695	chr3	+	147126467	147126742	True	NM_001168378,NM_001168379,NM_003412,NM_032153	chr3,chr3,chr3,chr3	-,-,+,-	ZIC4,ZIC4,ZIC1,ZIC4	-4396,-3160,438,-2060
chr3:151029667-151029885	chr3	+	151029834	151029901	True	NM_053002,NM_023915	chr3,chr3	+,-	MED12L,GPR87	-225213,4788
chr19:55677908-55678165	chr19	+	55677930	55678172	True	NM_178837,NM_000363,NM_017729	chr19,chr19,chr19	-,-,+	C19orf51,TNNI3,EPS8L1	12,-8830,-86221
chr9:26998846-27000818	chr9	+	26999012	27000481	True	NM_025103,NM_022901	chr9,chr9	+,-	IFT74,LRRC19	-42699,5267
chr10:35375144-35375512	chr10	+	35375494	35375561	True	NM_001198777,NM_003591,NM_001881	chr10,chr10,chr10	-,-,+	CUL2,CUL2,CREM	4060,3801,40239
chr1:145727787-145728025	chr1	+	145727826	145728028	True	NM_002614,NM_001201326,NM_001201325,NM_007053	chr1,chr1,chr1,chr1	+,+,+,-	PDZK1,PDZK1,PDZK1,CD160	-211,-211,-211,-12261
chr16:67517451-67518891	chr16	+	67517467	67518173	True	NM_004691,NM_001138,NM_024519	chr16,chr16,chr16	-,-,+	ATP6V0D1,AGRP,FAM65A	-2378,-5,44543
chr21:45595968-45596540	chr21	+	45595973	45596531	True	NM_198155,NM_015259	chr21,chr21	+,-	C21orf33,ICOSLG	-42530,64353
chr11:6463777-6464410	chr11	+	6463814	6464361	True	NM_012192,NM_000613	chr11,chr11	+,-	FXC1,HPX	38315,-1560
chr1:150565198-150566100	chr1	+	150565342	150566010	True	NM_182763,NR_036211	chr1,chr1	-,+	MCL1,MIR4257	-13128,-40988
chr7:65217894-65218287	chr7	+	65217990	65218278	True	NR_003110,NM_000181,NR_002961	chr7,chr7,chr7	+,-,+	CCT6P1,GUSB,SNORA22	-1957,229073,2234
chr14:59951451-59953153	chr14	+	59951571	59953177	True	NM_016475,NM_144581,NM_001098625	chr14,chr14,chr14	+,-,+	JKAMP,C14orf149,JKAMP	-461,-498,-461
chr2:204006719-204008626	chr2	+	204006784	204008644	True	NM_177538,NM_018256	chr2,chr2	+,-	CYP20A1,WDR12	94519,-229835
chr19:35981471-35982245	chr19	+	35981490	35982282	True	NM_005306,NM_207392	chr19,chr19	+,-	FFAR2,KRTDAP	-40924,-134
chr16:67526954-67527502	chr16	+	67526954	67527311	True	NM_001138,NM_024519	chr16,chr16	-,+	AGRP,FAM65A	-9238,35405
chr11:32914531-32914922	chr11	+	32914666	32914864	True	NM_001008391,NM_001076786	chr11,chr11	-,+	CCDC73,QSER1	-98479,-67
chr17:56622442-56623054	chr17	+	56622893	56623094	True	NM_001198713,NM_001038704,NM_002876	chr17,chr17,chr17	-,-,+	SEPT4,C17orf47,RAD51C	-4714,-1210,146868
chr16:20902917-20903736	chr16	+	20902977	20903763	True	NM_001128301,NM_001128302,NM_173475,NM_020424	chr16,chr16,chr16,chr16	+,+,-,+	LYRM1,LYRM1,DCUN1D3,LYRM1	8311,8311,7848,7793
chr11:60627369-60628733	chr11	+	60627376	60628697	True	NM_004778,NM_207341	chr11,chr11	-,+	GPR44,ZP1	-3932,6317
chr8:82634190-82635636	chr8	+	82634229	82635631	True	NM_001170797,NM_001170796,NM_024699,NR_033196,NR_033194,NR_033195,NR_033193,NM_152284	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,-,-,-,+	ZFAND1,ZFAND1,ZFAND1,ZFAND1,ZFAND1,ZFAND1,ZFAND1,CHMP4C	-690,-690,-690,-690,-690,-690,-690,9056
chr1:217820158-217820699	chr1	+	217820277	217820731	True	NM_138796,NM_018040	chr1,chr1	+,-	SPATA17,GPATCH2	-15634,-15868
chr11:11626892-11627823	chr11	+	11626945	11627861	True	NM_198516,NM_017944	chr11,chr11	-,+	GALNTL4,USP47	15750,235108
chr2:80529323-80529908	chr2	+	80529422	80529930	True	NM_004389,NM_178839	chr2,chr2	+,-	CTNNA2,LRRTM1	-789413,1607
chr22:37607844-37608068	chr22	+	37607874	37608104	True	NM_013385,NM_001051	chr22,chr22	+,-	CYTH4,SSTR3	70390,299
chr19:21006777-21008491	chr19	+	21007206	21008418	True	NR_034060,NM_145297	chr19,chr19	+,-	ZNF85,ZNF626	97640,-162804
chr8:49631600-49632531	chr8	+	49631822	49632434	True	NM_001007176,NM_001142857	chr8,chr8	+,-	C8orf22,EFCAB1	352468,15491
chr4:84376988-84377315	chr4	+	84376992	84377357	True	NM_133636,NM_016067	chr4,chr4	-,+	HELQ,MRPS18C	-21,11
chr5:171618017-171619022	chr5	+	171618181	171618791	True	NM_005990,NM_001171183	chr5,chr5	-,+	STK10,EFCAB9	-2835,2384
chr16:85206487-85208088	chr16	+	85206622	85208114	True	NR_033984,NM_198491	chr16,chr16	+,-	LOC400548,FAM92B	-35917,-60508
chr11:66239421-66239883	chr11	+	66239654	66239922	True	NM_170739,NM_145065,NM_130443,NM_001098510,NM_005700	chr11,chr11,chr11,chr11,chr11	-,+,+,+,+	MRPL11,PELI3,DPP3,PELI3,DPP3	-33344,-5369,7957,-5369,7957
chr7:148578948-148579479	chr7	+	148579219	148579530	True	NM_152998,NM_003592,NM_004456,NM_001203247,NM_001203248,NM_001203249	chr7,chr7,chr7,chr7,chr7,chr7	-,+,-,-,-,-	EZH2,CUL1,EZH2,EZH2,EZH2,EZH2	1964,-183337,1964,1964,1964,1124
chr15:75916561-75917204	chr15	+	75916600	75917101	True	NM_001042588,NM_001042581,NM_153271,NM_005701	chr15,chr15,chr15,chr15	-,-,+,-	SNUPN,SNUPN,SNX33,SNUPN	1668,1395,24246,1395
chr19:49260479-49260909	chr19	+	49260495	49260741	True	NM_019113,NM_000148	chr19,chr19	+,-	FGF21,FUT1	-1202,-1848
chr5:18736649-18736952	chr5	+	18736649	18736785	True	NM_001167667,NM_006317	chr5,chr5	-,+	CDH18,BASP1	1251626,-1518953
chr11:76093397-76094196	chr11	+	76093411	76094156	True	NM_020193,NM_004705	chr11,chr11	+,-	C11orf30,PRKRIR	61912,-1531
chr16:30934947-30935162	chr16	+	30935030	30935118	True	NM_001099784,NR_024348	chr16,chr16	+,-	FBXL19,FBXL19-AS1	777,-440
chr9:37465582-37465858	chr9	+	37465586	37465856	True	NM_022490,NM_014872	chr9,chr9	+,-	POLR1E,ZBTB5	20088,-179
chr3:118892519-118893965	chr3	+	118892718	118893544	True	NM_006952,NM_152538	chr3,chr3	+,-	UPK1B,IGSF11	-345,-27820
chr8:120643645-120645025	chr8	+	120643771	120645032	True	NM_006209,NM_002514,NM_001130863,NM_001040092	chr8,chr8,chr8,chr8	-,+,-,-	ENPP2,NOV,ENPP2,ENPP2	6125,-215270,6125,6125
chr3:187385081-187386920	chr3	+	187385424	187386856	True	NM_001048,NR_034062	chr3,chr3	-,+	SST,LOC100131635	1395,33297
chr17:34539742-34541406	chr17	+	34539840	34541444	True	NM_001001435,NM_021006,NM_207007	chr17,chr17,chr17	+,-,+	CCL4L1,CCL3L1,CCL4L2	-1423,-15684,-1423
chr17:34539742-34541406	chr17	+	34641924	34643011	False	NM_001001435,NM_021006,NM_207007	chr17,chr17,chr17	+,-,+	CCL4L1,CCL3L1,CCL4L2	-1942,-16194,-1942
chr19:47251593-47252836	chr19	+	47251794	47252620	True	NM_013403,NM_001039877,NM_001039885,NM_024301	chr19,chr19,chr19,chr19	-,-,+,+	STRN4,STRN4,FKRP,FKRP	-2074,-2074,-2542,-2542
chr1:167868358-167868705	chr1	+	167868417	167868719	True	NM_001017977,NM_001167749	chr1,chr1	+,-	DCAF6,ADCY10	37077,14784
chr15:42786872-42787349	chr15	+	42787142	42787318	True	NM_003825,NM_022473,NM_130798	chr15,chr15,chr15	+,-,+	SNAP23,ZFP106,SNAP23	516,-37412,516
chr15:97326891-97327117	chr15	+	97326964	97327110	True	NM_173499,NR_024172	chr15,chr15	+,-	SPATA8,LOC91948	-336,1090607
chr12:110209700-110210088	chr12	+	110209761	110210123	True	NR_026662,NM_032829,NR_026661	chr12,chr12,chr12	-,+,-	MGC14436,C12orf34,MGC14436	1219,-57625,1216
chr21:40123308-40123987	chr21	+	40123584	40124002	True	NR_027067,NM_005239	chr21,chr21	-,+	NCRNA00114,ETS2	229,53846
chr6:13616638-13618518	chr6	+	13616867	13618241	True	NM_016167,NM_005493	chr6,chr6	+,-	NOL7,RANBP9	-1363,93615
chr9:101984155-101984358	chr9	+	101984270	101984407	True	NM_006808,NR_024532,NM_033087	chr9,chr9,chr9	+,-,-	SEC61B,ALG2,ALG2	162,-24,-24
chr15:74492884-74493828	chr15	+	74493015	74493639	True	NM_001199042,NM_001199040,NM_022369,NM_001142619,NM_001142618,NM_001142617,NM_001142620,NM_201526,NM_001199041	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,-,-,-,-,-,+,-	STRA6,STRA6,STRA6,STRA6,STRA6,STRA6,STRA6,ISLR,STRA6	1631,8457,1631,7782,1967,7782,7782,-26163,6806
chr11:117019063-117020441	chr11	+	117019063	117019543	True	NM_001184747,NM_001184746,NM_001184748,NM_025164,NM_002572	chr11,chr11,chr11,chr11,chr11	+,+,+,-,+	PAFAH1B2,PAFAH1B2,PAFAH1B2,SIK3,PAFAH1B2	-4124,-4124,-4124,-50070,-4124
chr19:45971882-45972269	chr19	+	45971901	45972177	True	NM_001114171,NM_006732,NM_206901	chr19,chr19,chr19	+,+,-	FOSB,FOSB,RTN2	-699,-699,24347
chr1:159797395-159797782	chr1	+	159797419	159797584	True	NM_001134233,NM_020125	chr1,chr1	-,+	C1orf204,SLAMF8	27614,-996
chr8:8235719-8236468	chr8	+	8235805	8236068	True	NR_024361,NM_001080826	chr8,chr8	+,-	FLJ10661,SGK223	-149764,3247
chr10:30964998-30965780	chr10	+	30965048	30965818	True	NM_183058,NM_005204	chr10,chr10	-,+	LYZL2,MAP3K8	-46401,-242234
chr10:21822420-21822800	chr10	+	21822493	21822723	True	NM_004641,NM_001195628,NM_001195630,NM_207371,NM_001195626,NM_001195627	chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,-,+,+	MLLT10,MLLT10,MLLT10,C10orf140,MLLT10,MLLT10	377,377,377,-7882,850,377
chr8:37730389-37730842	chr8	+	37730395	37730766	True	NM_018310,NM_032777	chr8,chr8	-,+	BRF2,GPR124	-22964,-76045
chr1:187533896-187534418	chr1	+	187533922	187534463	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-884363,-735947
chr15:76014384-76014909	chr15	+	76014389	76014825	True	NM_175881,NM_001897	chr15,chr15	+,-	ODF3L1,CSPG4	1493,-9200
chr13:111367675-111368183	chr13	+	111367688	111368224	True	NM_198218,NM_198219,NM_005537,NM_024537,NM_198217	chr13,chr13,chr13,chr13,chr13	+,+,+,-,+	ING1,ING1,ING1,CARS2,ING1	-2129,-2114,-380,-9208,-2656
chr6:90529998-90530479	chr6	+	90530176	90530528	True	NM_001137667,NM_001137668,NM_014611,NM_012115	chr6,chr6,chr6,chr6	+,+,-,+	CASP8AP2,CASP8AP2,MDN1,CASP8AP2	9090,9090,-734,9090
chr5:179782139-179783244	chr5	+	179782146	179783214	True	NM_005110,NM_015455	chr5,chr5	-,+	GFPT2,CNOT6	-1831,138202
chr9:134943917-134944658	chr9	+	134943978	134944590	True	NM_032536,NM_004269	chr9,chr9	+,-	NTNG2,MED27	92743,10713
chr2:101893736-101893941	chr2	+	101893740	101893852	True	NR_003070,NM_017546	chr2,chr2	-,+	SNORD89,C2orf29	-4229,-24446
chr20:33266294-33266801	chr20	+	33266293	33266680	True	NM_080476,NM_021202	chr20,chr20	-,+	PIGU,TP53INP2	-1204,25467
chr4:71509312-71510351	chr4	+	71509326	71510382	True	NM_144646,NM_031889	chr4,chr4	-,+	IGJ,ENAM	22016,-14916
chr2:96933807-96934235	chr2	+	96934106	96934262	True	NM_004804,NM_017849,NM_001193304	chr2,chr2,chr2	+,-,-	CIAO1,TMEM127,TMEM127	-2273,-2355,-2355
chr3:49045653-49046436	chr3	+	49045709	49046262	True	NM_001009996,NM_018031	chr3,chr3	-,+	DALRD3,WDR6	9805,-1123
chr13:53419748-53420020	chr13	+	53419820	53420062	True	NR_031582,NM_032949,NM_002590	chr13,chr13,chr13	+,-,-	MIR759,PCDH8,PCDH8	-35686,2763,2763
chr11:33914817-33916526	chr11	+	33914996	33916577	True	NM_203364,NM_005574	chr11,chr11	+,-	CAPRIN1,LMO2	156652,-1160
chr3:160170247-160170496	chr3	+	160170307	160170493	True	NR_029525,NM_173084	chr3,chr3	+,-	MIR16-2,TRIM59	-47825,-2681
chr13:21537175-21538031	chr13	+	21537316	21537831	True	NM_022459,NM_005870	chr13,chr13	-,+	XPO4,SAP18	-60403,176821
chr1:161123999-161124365	chr1	+	161123999	161124257	True	NM_032998,NM_012475,NM_001014443,NM_016406	chr1,chr1,chr1,chr1	-,+,+,+	DEDD,USP21,USP21,UFC1	-21521,4996,4996,-516
chr8:22857787-22858000	chr8	+	22857786	22858049	True	NM_003842,NM_015178,NM_001160037	chr8,chr8,chr8	-,+,+	TNFRSF10B,RHOBTB2,RHOBTB2	68701,-745,-4476
chr10:12236467-12236881	chr10	+	12236685	12236857	True	NM_014142,NM_006023	chr10,chr10	-,+	NUDT5,CDC123	1336,1103
chr22:50352382-50352661	chr22	+	50352413	50352523	True	NM_024105,NM_001001852	chr22,chr22	-,+	ALG12,PIM3	-40307,1619
chr10:49452117-49452794	chr10	+	49452314	49452833	True	NM_001018071,NM_002750	chr10,chr10	-,+	FRMPD2,MAPK8	30158,156853
chr17:3185667-3186812	chr17	+	3185717	3186465	True	NM_002551,NM_002550,NR_024128	chr17,chr17,chr17	-,-,+	OR3A2,OR3A1,OR3A4	-3449,9475,27073
chr17:47922270-47922564	chr17	+	47922355	47922429	True	NM_001077504,NM_001077505,NM_001077506,NM_007067,NM_001077503,NM_170685	chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,+,-,-	TAC4,TAC4,TAC4,MYST2,TAC4,TAC4	3000,3000,3000,-56427,3000,3000
chr22:38990687-38992180	chr22	+	38991183	38991884	True	NM_001002880,NM_007068	chr22,chr22	+,-	CBY1,DMC1	60773,-24994
chr9:115652497-115652772	chr9	+	115652496	115652768	True	NM_001012994,NM_033051	chr9,chr9	+,-	SNX30,SLC46A2	-139413,475
chr12:118575327-118575918	chr12	+	118575369	118575879	True	NM_002567,NM_019086	chr12,chr12	+,-	PEBP1,VSIG10	-1559,-33559
chr7:74071217-74071559	chr7	+	74071258	74071492	True	NM_173537,NM_001518,NM_033001,NM_033000,NM_001163636,NM_032999	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,+,+	GTF2IRD2,GTF2I,GTF2I,GTF2I,GTF2I,GTF2I	196399,537,537,537,537,537
chr22:19746254-19746474	chr22	+	19746254	19746450	True	NM_005992,NM_024627,NM_080647,NM_080646	chr22,chr22,chr22,chr22	+,-,+,+	TBX1,C22orf29,TBX1,TBX1	-2079,95971,-2079,-2079
chr2:180714373-180715318	chr2	+	180714610	180715347	True	NR_031659,NM_182678	chr2,chr2	-,+	MIR1258,UBE2E3	10338,1129764
chr18:3216157-3217199	chr18	+	3216316	3217218	True	NM_019856,NM_006471,NM_003803	chr18,chr18,chr18	-,+,-	MYOM1,MYL12A,MYOM1	2938,30309,2938
chr1:12914282-12915301	chr1	+	12914414	12915219	True	NM_001013631,NM_023014,NM_001146181	chr1,chr1,chr1	-,+,-	HNRNPCL1,PRAMEF2,LOC649330	-5836,1721,-6177
chr1:70610286-70611830	chr1	+	70610833	70611588	True	NM_017768,NM_001190987	chr1,chr1	-,+	LRRC40,SRSF11	59823,59776
chr3:56795194-56795816	chr3	+	56795290	56795864	True	NM_001128616,NR_024460	chr3,chr3	-,+	ARHGEF3,CCDC66	13931,-204157
chr6:119215258-119215474	chr6	+	119215309	119215435	True	NM_017696,NM_014034	chr6,chr6	-,+	MCM9,ASF1A	37522,-119
chr3:49066551-49067098	chr3	+	49066672	49067094	True	NM_199074,NM_199073,NR_029948,NM_199070,NM_000884,NR_029690,NM_018114,NM_199069	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,-,+,-,-,-,+	NDUFAF3,NDUFAF3,MIR425,NDUFAF3,IMPDH2,MIR191,DALRD3,NDUFAF3	-8815,-8105,-9005,-7649,21,-8530,-8205,-7649
chr22:50174956-50175299	chr22	+	50174967	50175337	True	NM_014838,NR_026993	chr22,chr22	+,-	ZBED4,LOC90834	72159,-1009
chr14:88477799-88478597	chr14	+	88477802	88478612	True	NM_003608,NM_001201402	chr14,chr14	+,-	GPR65,GALC	-6385,-17793
chr14:23821443-23821927	chr14	+	23821538	23821668	True	NM_020372,NM_016609,NM_172314	chr14,chr14,chr14	-,-,+	SLC22A17,SLC22A17,IL25	-59,462,20349
chr1:180201122-180202006	chr1	+	180201159	180201771	True	NR_037642,NM_033343	chr1,chr1	-,+	LOC100527964,LHX4	42095,-1778
chr12:11801647-11801852	chr12	+	11801688	11801766	True	NM_001987,NM_006248	chr12,chr12	+,-	ETV6,PRB2	1021,-253190
chr5:112073605-112075275	chr5	+	112073783	112075284	True	NM_001127510,NM_000038,NM_005669	chr5,chr5,chr5	+,+,-	APC,APC,REEP5	-278,-278,182797
chr3:50273752-50273980	chr3	+	50273786	50273930	True	NM_002070,NM_006764	chr3,chr3	+,-	GNAI2,IFRD2	-190,56146
chr12:85456884-85458188	chr12	+	85457025	85457863	True	NM_001100917,NM_001079910	chr12,chr12	-,+	TSPAN19,LRRIQ1	-26970,-26984
chr20:21285691-21286333	chr20	+	21285690	21286375	True	NM_012255,NM_033176	chr20,chr20	+,-	XRN2,NKX2-4	-1806,91722
chr1:202137216-202137445	chr1	+	202137319	202137455	True	NR_002930,NR_037663,NR_037664,NM_001199797,NM_080588,NM_002832	chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,-,-,-	PTPRVP,PTPN7,PTPN7,PTPN7,PTPN7,PTPN7	-191,-6603,-6603,-6603,-8200,-6603
chr7:29715250-29716358	chr7	+	29715482	29716374	True	NR_036482,NR_024278,NR_036554,NR_027347	chr7,chr7,chr7,chr7	+,-,+,-	DPY19L2P3,LOC646762,DPY19L2P3,LOC100271874	8395,8430,9313,9113
chr7:29715250-29716358	chr7	-	32776871	32777559	False	NR_003502,NR_030320,NR_036680	chr7,chr7,chr7	+,+,-	LOC441208,MIR550A2,DPY19L1P1	-9374,-4343,-18091
chr14:23389087-23390946	chr14	+	23389205	23390745	True	NM_006109,NM_173527,NM_001077351,NM_001077352,NM_018107,NM_001039619	chr14,chr14,chr14,chr14,chr14,chr14	-,+,-,-,-,-	PRMT5,REM2,RBM23,RBM23,RBM23,PRMT5	7968,-36831,-809,-809,-809,7968
chr15:41405759-41406186	chr15	+	41405758	41406015	True	NM_017553,NM_007236	chr15,chr15	-,+	INO80,CHP	2386,117421
chrX:63426337-63426559	chrX	+	63426371	63426569	True	NM_152424,NM_001010888	chrX,chrX	-,+	FAM123B,ZC3H12B	-747,1282045
chr20:62713168-62713800	chr20	+	62713358	62713704	True	NM_182647,NM_001007125,NM_001039467,NM_001200019,NM_000913,NM_005873	chr20,chr20,chr20,chr20,chr20,chr20	+,-,-,+,+,-	OPRL1,C20orf201,RGS19,OPRL1,OPRL1,RGS19	-1951,2058,-2034,2664,-1951,-2513
chr1:59764877-59765134	chr1	+	59764904	59765182	True	NR_027120,NM_018291,NM_001113411	chr1,chr1,chr1	-,+,+	LOC729467,FGGY,FGGY	-152425,-2330,-2330
chr8:81212098-81212405	chr8	+	81212222	81212406	True	NM_005079,NM_001105539	chr8,chr8	-,+	TPD52,ZBTB10	-128386,186041
chr17:1083813-1084289	chr17	+	1083962	1084068	True	NM_001164405,NM_021962,NM_001159746	chr17,chr17,chr17	+,-,-	BHLHA9,ABR,ABR	89789,-831,6598
chr19:8388033-8389145	chr19	+	8388107	8388943	True	NM_005001,NM_001031	chr19,chr19	-,+	NDUFA7,RPS28	-1827,-1774
chr19:49082832-49083638	chr19	+	49083142	49083525	True	NM_017708,NM_004605	chr19,chr19	-,+	FAM83E,SULT2B1	33219,-4200
chr19:47333936-47334994	chr19	+	47334407	47334843	True	NR_024258,NM_024301	chr19,chr19	-,+	SNAR-E,FKRP	-446,-85165
chr21:34964649-34966008	chr21	+	34964751	34966012	True	NM_001001132,NM_138927,NM_017613	chr21,chr21,chr21	+,+,-	ITSN1,SON,DONSON	48771,-49452,-3737
chr19:8934998-8935530	chr19	+	8935106	8935516	True	NM_145208,NM_144693	chr19,chr19	+,-	MBD3L1,ZNF558	17752,-1541
chr1:108184875-108185289	chr1	+	108185220	108185288	True	NM_001079874,NM_014917	chr1,chr1	-,+	VAV3,NTNG1	45888,-502526
chr1:180882512-180882851	chr1	+	180882614	180882770	True	NM_020950,NM_005819	chr1,chr1	+,-	KIAA1614,STX6	-352,109332
chr2:70782608-70783058	chr2	+	70782655	70782751	True	NM_001099691,NM_016297,NM_003236	chr2,chr2,chr2	-,+,-	TGFA,PCYOX1,TGFA	-1550,-297475,-1550
chr20:44439549-44439836	chr20	+	44439548	44439822	True	NM_181803,NM_181802,NM_181801,NM_181800,NM_007019,NM_003279,NM_181799	chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,+,+,+,+,-,+	UBE2C,UBE2C,UBE2C,UBE2C,UBE2C,TNNC2,UBE2C	1432,1432,1849,1432,1432,16181,1432
chr14:103019893-103021270	chr14	+	103020057	103021306	True	NM_152326,NR_036192	chr14,chr14	-,+	ANKRD9,MIR4309	-43929,-14127
chr1:208421430-208421813	chr1	+	208421450	208421702	True	NR_026817,NM_025179	chr1,chr1	+,-	LOC148696,PLXNA2	-429777,-3785
chr14:56624609-56624978	chr14	+	56624608	56624747	True	NR_026797,NM_021255	chr14,chr14	-,+	C14orf34,PELI2	-361216,-39575
chr22:50968729-50968953	chr22	+	50968832	50968988	True	NM_005138,NM_001953,NM_001169111,NM_001169110,NM_001113756,NM_001169109,NM_001113755,NM_001014440,NM_138433	chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,-,-,-,-,+	SCO2,TYMP,SCO2,SCO2,TYMP,SCO2,TYMP,ODF3B,KLHDC7B	-4798,-318,-4799,-4258,-574,-3964,-318,2070,17473
chr1:35735099-35736075	chr1	+	35735195	35736083	True	NM_005066,NM_005095	chr1,chr1	-,+	SFPQ,ZMYM4	-76452,-678
chr4:72050467-72052246	chr4	+	72050684	72052135	True	NM_001098484,NM_002092,NM_001134742	chr4,chr4,chr4	+,-,+	SLC4A4,GRSF1,SLC4A4	867,-345057,867
chr1:48450879-48452560	chr1	+	48450914	48452492	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	10120,235864
chr1:40252903-40253153	chr1	+	40253012	40253174	True	NM_001720,NM_001195007	chr1,chr1	-,+	BMP8B,PPIE	1409,-48546
chr3:133526255-133527120	chr3	+	133526465	133526882	True	NM_016577,NM_021203	chr3,chr3	-,+	RAB6B,SRPRB	87872,-23645
chr12:31814158-31814500	chr12	+	31814160	31814400	True	NM_173802,NM_001135863,NM_001113402	chr12,chr12,chr12	+,+,-	METTL20,METTL20,AMN1	-2090,-1602,67778
chr14:39707102-39707467	chr14	+	39707231	39707344	True	NM_177452,NM_054024	chr14,chr14	-,+	TRAPPC6B,MIA2	-67597,-4164
chr5:68618548-68618990	chr5	+	68618772	68618832	True	NM_176816,NM_133343	chr5,chr5	-,+	CCDC125,RAD17	-2362,46291
chr16:50058318-50058903	chr16	+	50058426	50058862	True	NM_153261,NM_015069	chr16,chr16	+,-	TMEM188,ZNF423	326,-197508
chr5:96017359-96019348	chr5	+	96017877	96019320	True	NM_173060,NM_001042440,NM_016442	chr5,chr5,chr5	+,+,-	CAST,CAST,ERAP1	19172,-20034,124623
chr1:116961386-116962157	chr1	+	116961461	116961869	True	NR_024126,NR_024125,NR_024124,NM_001160234,NR_027646,NR_027645	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,-	ATP1A1OS,ATP1A1OS,ATP1A1OS,ATP1A1,ATP1A1OS,ATP1A1OS	-280,-256,-264,-35520,-217,-264
chr17:37885347-37886319	chr17	+	37885391	37886341	True	NM_032339,NM_001030002,NM_005310	chr17,chr17,chr17	-,+,+	C17orf37,GRB7,GRB7	497,8248,7845
chr10:124557084-124557532	chr10	+	124557203	124557487	True	NM_022034,NR_003570	chr10,chr10	-,+	CUZD1,FLJ46361	48254,-41045
chr11:92085531-92085982	chr11	+	92085533	92085956	True	NM_152313,NM_001008781	chr11,chr11	-,+	SLC36A4,FAT3	845196,-322
chr10:21824097-21824321	chr10	+	21824151	21824369	True	NM_004641,NM_001195628,NM_001195630,NM_207371,NM_001195626,NM_001195627	chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,-,+,+	MLLT10,MLLT10,MLLT10,C10orf140,MLLT10,MLLT10	-1101,-1101,-1101,-9540,-628,-1101
chr7:137778314-137778980	chr7	+	137778321	137778939	True	NM_005989,NM_194071	chr7,chr7	+,-	AKR1D1,CREB3L2	-17194,-91475
chr2:223550139-223550612	chr2	+	223550139	223550673	True	NM_058165,NM_005687	chr2,chr2	+,-	MOGAT1,FARSB	-13733,-29312
chr8:102137265-102138633	chr8	+	102137725	102138393	True	NM_001042511,NR_033962	chr8,chr8	-,+	ZNF706,FLJ42969	79530,-73494
chr15:63570078-63570560	chr15	+	63570294	63570597	True	NM_001218,NM_031301,NM_001145646	chr15,chr15,chr15	-,+,+	CA12,APH1B,APH1B	103528,-596,-596
chr11:50257097-50257300	chr11	+	50257149	50257217	True	NR_024504,NR_003034	chr11,chr11	+,-	LOC646813,LOC441601	111100,466
chr3:71834824-71835922	chr3	+	71834950	71835938	True	NM_018971,NM_001126128,NM_021935	chr3,chr3,chr3	+,-,-	GPR27,PROK2,PROK2	-31800,-593,-593
chr1:57289964-57291368	chr1	+	57290266	57291391	True	NM_000562,NM_001004303	chr1,chr1	+,-	C8A,C1orf168	29051,-4897
chr6:143893780-143895387	chr6	+	143894164	143895424	True	NM_001100166,NR_027113	chr6,chr6	+,-	PHACTR2,LOC285740	33892,-3688
chr15:58988408-58989143	chr15	+	58988545	58989103	True	NM_001040450,NR_002927	chr15,chr15	+,-	FAM63B,HSP90AB4P	74289,-3221
chr2:208029112-208029865	chr2	+	208029375	208029847	True	NM_003709,NM_173077	chr2,chr2	-,+	KLF7,CPO	817,-225149
chr3:156878281-156878503	chr3	+	156878289	156878499	True	NR_034008,NM_020307	chr3,chr3	+,-	LOC100498859,CCNL1	-70670,33
chr6:2243681-2244187	chr6	+	2243712	2244058	True	NM_001500,NM_020135	chr6,chr6	-,+	GMDS,WRNIP1	1852,521607
chr5:146216101-146217499	chr5	+	146216161	146217396	True	NM_006706,NM_004576	chr5,chr5	+,-	TCERG1,PPP2R2B	-389339,40820
chr12:25346914-25348076	chr12	+	25347241	25348061	True	NM_001001660,NM_001204101,NM_001204102,NM_001082972,NM_001082973,NM_018272	chr12,chr12,chr12,chr12,chr12,chr12	+,-,-,-,-,-	LYRM5,CASC1,CASC1,CASC1,CASC1,CASC1	88,83,83,83,83,83
chr3:71772173-71773047	chr3	+	71772205	71773088	True	NM_001134650,NM_001134651,NM_018971	chr3,chr3,chr3	-,-,+	EIF4E3,EIF4E3,GPR27	5232,1489,30112
chr19:1883902-1884875	chr19	+	1884109	1884875	True	NM_079834,NM_001130111,NM_031213	chr19,chr19,chr19	+,-,-	SCAMP4,FAM108A1,FAM108A1	20497,693,693
chr4:84029055-84029465	chr4	+	84029068	84029436	True	NM_016619,NM_001130716,NM_001130715,NM_016129	chr4,chr4,chr4,chr4	-,-,-,+	PLAC8,PLAC8,PLAC8,COPS4	6525,1626,6525,-72880
chr2:114329386-114330071	chr12	+	60434	60488	True	NR_028269,NR_026823	chr12,chr12	+,-	LOC100288778,FAM138D	27495,88978
chr2:114329386-114330071	chr2	+	114329485	114329933	False	NR_026821,NR_024005	chr2,chr2	+,-	FAM138B,DDX11L2	5025,29274
chr19:11974795-11975203	chr19	+	11974827	11975091	True	NM_152262,NM_001080493	chr19,chr19	+,-	ZNF439,ZNF823	1752,-125067
chr11:2194400-2194670	chr11	+	2194408	2194614	True	NM_199293,NM_199292,NR_028044,NM_000360	chr11,chr11,chr11,chr11	-,-,+,-	TH,TH,IGF2AS,TH	-1373,-1373,-32701,-1373
chr4:49311035-49311465	chr4	+	49311061	49311135	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-322847,-402246
chr14:105943628-105944185	chr14	+	105943700	105944220	True	NM_001311,NM_001312,NM_001519	chr14,chr14,chr14	+,+,-	CRIP1,CRIP2,BRF1	9036,-2620,-176371
chr15:66086952-66087270	chr15	+	66087011	66087118	True	NM_004663,NM_005848,NM_001144823	chr15,chr15,chr15	+,-,-	RAB11A,DENND4A,DENND4A	74677,-2380,-2380
chr1:11117293-11117926	chr1	+	11117599	11117669	True	NM_003132,NM_007375	chr1,chr1	-,+	SRM,TARDBP	2472,-44971
chrX:152955919-152956185	chr16	-	32894658	32894708	False	NR_003083,NM_016212	chr16,chr16	-,+	SLC6A10P,TP53TG3	1805,310271
chrX:152955919-152956185	chr16	+	33780615	33780665	False	NR_033866,NM_001205265	chr16,chr16	-,+	LOC390705,TP53TG3B	-481913,-518546
chrX:152955919-152956185	chrX	+	152955995	152956195	True	NM_001039582,NM_001142806,NM_005629,NM_001142805	chrX,chrX,chrX,chrX	-,+,+,+	PNCK,SLC6A8,SLC6A8,SLC6A8	-16179,-1080,-2294,-2294
chr5:87970891-87971581	chr5	+	87971191	87971459	True	NR_024383,NR_015436,NR_030741,NM_022650,NR_024384	chr5,chr5,chr5,chr5,chr5	-,-,-,+,-	LOC645323,LOC645323,MIR9-2,RASA1,LOC645323	2863,9221,-8434,-1406476,-2045
chr22:39495710-39496461	chr22	+	39496268	39496424	True	NM_001166004,NM_181773,NM_175709,NM_001166002,NM_001166003	chr22,chr22,chr22,chr22,chr22	+,+,-,+,+	APOBEC3H,APOBEC3H,CBX7,APOBEC3H,APOBEC3H	-3090,-3090,52164,-3090,-3090
chr3:69439898-69440256	chr3	+	69440064	69440301	True	NM_006407,NM_015123	chr3,chr3	+,-	ARL6IP5,FRMD4B	-306030,-4634
chrX:39954267-39955014	chrX	+	39954349	39954932	True	NM_005765,NM_001123385,NM_017745	chrX,chrX,chrX	+,-,-	ATP6AP2,BCOR,BCOR	485283,1837,1837
chr19:18119214-18119522	chr19	+	18119284	18119466	True	NM_015683,NM_001025604,NM_005535	chr19,chr19,chr19	+,+,-	ARRDC2,ARRDC2,IL12RB1	-358,-7391,78281
chr2:44587795-44588413	chr2	+	44587937	44588444	True	NM_024766,NM_001171617,NM_001171613,NM_001042386,NM_001171603,NM_001042385,NM_001171606,NM_006036	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-,-,-	CAMKMT,PREPL,PREPL,PREPL,PREPL,PREPL,PREPL,PREPL	598,607,306,-1049,607,-1049,306,-124
chr20:59830180-59830784	chr20	+	59830189	59830790	True	NM_001794,NR_031658	chr20,chr20	+,-	CDH4,MIR1257	-2688,697983
chr7:91862300-91862879	chr7	+	91862300	91862707	True	NM_019004,NM_004912	chr7,chr7	+,-	ANKIB1,KRIT1	12840,12564
chr3:25800937-25802071	chr3	+	25801098	25802076	True	NM_001145391,NM_001145293	chr3,chr3	+,-	OXSM,NGLY1	29486,22963
chr7:138915465-138915686	chr7	+	138915594	138915732	True	NM_173569,NM_024625	chr7,chr7	+,-	UBN2,ZC3HAV1	498,-121129
chr20:46042151-46042579	chr20	+	46042150	46042378	True	NM_183048,NM_001174087	chr20,chr20	-,+	ZMYND8,NCOA3	-56676,88222
chr10:1568958-1570780	chr10	+	1569185	1570768	True	NR_033387,NM_018702	chr10,chr10	+,-	NCRNA00168,ADARB2	-411,209005
chr2:220458735-220459346	chr2	+	220458761	220459119	True	NM_001173408,NM_052902	chr2,chr2	-,+	OBSL1,STK11IP	-22493,3476
chr22:50051543-50052170	chr22	+	50051542	50052124	True	NR_026997,NM_014838	chr22,chr22	-,+	C22orf34,ZBED4	-352,195372
chr17:80008222-80008543	chr17	+	80008232	80008584	True	NM_004127,NM_002917,NM_212492	chr17,chr17,chr17	+,-,+	GPS1,RFNG,GPS1	1178,1116,1178
chr6:34434368-34434750	chr6	+	34434401	34434751	True	NM_001204091,NM_020804	chr6,chr6	-,+	RPS10,PACSIN1	-40499,-599
chr22:31887855-31889009	chr22	+	31887854	31888633	True	NM_001164501,NM_014775,NM_001007467,NM_001164502,NM_019843	chr22,chr22,chr22,chr22,chr22	-,+,+,-,-	EIF4ENIF1,SFI1,SFI1,EIF4ENIF1,EIF4ENIF1	-2307,3627,3627,-1980,-1980
chr18:59161844-59162720	chr18	+	59161891	59162599	True	NM_031891,NM_173557	chr18,chr18	+,-	CDH20,RNF152	-4175,397762
chr7:65017157-65017696	chr7	+	65017156	65017216	True	NM_000181,NR_027392	chr7,chr7	-,+	GUSB,INTS4L2	430135,95560
chr7:65017157-65017696	chr7	-	64604052	64604108	False	NR_027393,NM_001007253	chr7,chr7	+,-	INTS4L1,ERV3	-2500,-136928
chr17:78076384-78076875	chr17	+	78076456	78076797	True	NM_001079804,NM_001079803,NM_014740,NM_000152	chr17,chr17,chr17,chr17	+,+,-,+	GAA,GAA,EIF4A3,GAA	-1152,-1152,44242,-1152
chr7:154736074-154736984	chr7	+	154736215	154737033	True	NM_007349,NR_024476	chr7,chr7	-,+	PAXIP1,LOC100132707	57704,-16039
chr2:170623533-170624097	chr2	+	170623685	170624113	True	NM_003142,NM_014168	chr2,chr2	+,-	SSB,METTL5	31275,57292
chr5:158608588-158610050	chr5	+	158609015	158610070	True	NM_145049,NM_001199382	chr5,chr5	+,-	UBLCP1,RNF145	80018,24636
chr14:21496501-21497475	chr14	+	21496671	21497421	True	NM_001012264,NM_201536,NM_201537,NM_201535,NM_173846,NM_201541,NM_016250,NM_201540,NM_201538,NM_201539	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	-,-,-,-,+,-,-,-,-,-	RNASE13,NDRG2,NDRG2,NDRG2,TPPP2,NDRG2,NDRG2,NDRG2,NDRG2,NDRG2	5581,-2736,-2736,-2736,923,-3407,-2736,-3407,-3407,-3407
chr8:127571630-127572975	chr8	+	127571662	127572648	True	NM_001159542,NM_174911	chr8,chr8	+,-	POU5F1B,FAM84B	855208,-951
chr6:13485602-13486116	chr6	+	13485638	13486038	True	NM_033069,NM_018988,NM_031244	chr6,chr6,chr6	-,-,+	C6orf114,GFOD1,SIRT5	427,1799,88753
chr8:103872295-103872649	chr8	+	103872313	103872467	True	NM_015878,NM_148174,NM_001695	chr8,chr8,chr8	-,-,+	AZIN1,AZIN1,ATP6V1C1	3980,3980,160780
chr17:4903212-4903438	chr17	+	4903319	4903469	True	NM_001167986,NM_001167987,NM_006612,NM_001167985,NM_213726	chr17,chr17,chr17,chr17,chr17	-,-,+,-,-	INCA1,INCA1,KIF1C,INCA1,INCA1	-2414,-2414,-2127,-2414,-2414
chr6:151188102-151188486	chr6	+	151188142	151188300	True	NM_020861,NM_015440	chr6,chr6	-,+	ZBTB2,MTHFD1L	524431,-1502
chr1:160714738-160716027	chr1	+	160714937	160715955	True	NM_021181,NM_001778	chr1,chr1	+,-	SLAMF7,CD48	-5911,-33352
chr2:242445035-242446379	chr2	+	242445139	242446413	True	NM_032515,NM_006374	chr2,chr2	+,-	BOK,STK25	51778,1671
chr2:28976895-28978072	chr2	+	28977048	28977870	True	NM_206876,NM_017910,NM_002709	chr2,chr2,chr2	+,-,+	PPP1CB,TRMT61B,PPP1CB	-2492,115368,-2480
chr20:44441620-44443568	chr20	+	44441747	44443310	True	NM_181803,NM_181802,NM_181801,NM_181800,NM_007019,NM_003279,NM_181799	chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,+,+,+,+,-,+	UBE2C,UBE2C,UBE2C,UBE2C,UBE2C,TNNC2,UBE2C	-543,-543,-126,-543,-543,12694,-543
chr1:151690536-151691146	chr1	+	151690657	151691155	True	NM_001144956,NM_001172649,NM_007185,NM_001172648	chr1,chr1,chr1,chr1	+,-,-,-	RIIAD1,CELF3,CELF3,CELF3	2857,-1775,-1367,-1865
chr16:58164687-58165644	chr16	+	58164887	58165416	True	NM_013242,NM_002428	chr16,chr16	-,+	C16orf80,MMP15	-1591,-105667
chr11:65291120-65291722	chr11	+	65291360	65291688	True	NM_001048218,NM_001130144,NM_020680	chr11,chr11,chr11	+,-,+	SCYL1,LTBP3,SCYL1	859,34061,859
chr2:96780583-96780802	chr2	+	96780586	96780800	True	NR_003698,NM_000682	chr2,chr2	+,-	LOC729234,ADRA2B	-104338,1138
chr5:133507657-133508625	chr5	+	133507762	133508174	True	NM_006930,NR_037434,NM_170679	chr5,chr5,chr5	-,+,-	SKP1,MIR3661,SKP1	4604,53273,4604
chr4:89721240-89721808	chr4	+	89721239	89721492	True	NM_001015045,NR_002806	chr4,chr4	-,+	FAM13A,FAM13AOS	22963,-90350
chr7:82072663-82072867	chr7	+	82072662	82072896	True	NM_000722,NM_001127444	chr7,chr7	-,+	CACNA2D1,CD36	185,-1796951
chr8:62585966-62586741	chr8	+	62585969	62586716	True	NM_173519,NM_001164750	chr8,chr8	+,-	CLVS1,ASPH	-385495,15748
chr16:81479835-81480108	chr16	+	81479905	81480127	True	NM_001076780,NM_198390	chr16,chr16	-,+	PKD1L2,CMIP	-225930,-1181
chr4:83292752-83293666	chr4	+	83292847	83293639	True	NM_001003810,NM_031369,NM_021204,NM_002138,NM_031370	chr4,chr4,chr4,chr4,chr4	-,-,+,-,-	HNRNPD,HNRNPD,ENOPH1,HNRNPD,HNRNPD	1560,1560,58086,1560,1560
chr12:31881629-31882062	chr12	+	31881643	31882074	True	NR_004854,NM_001135863,NM_001113402	chr12,chr12,chr12	-,+,-	AMN1,METTL20,AMN1	84,-69085,84
chr3:21735694-21736463	chr3	+	21735834	21736479	True	NR_002311,NM_024697	chr3,chr3	+,-	VENTXP7,ZNF385D	-288667,56388
chr19:15343053-15343343	chr19	+	15343141	15343261	True	NM_033025,NM_001142886,NM_024794	chr19,chr19,chr19	+,-,-	SYDE1,EPHX3,EPHX3	-124978,647,20
chr5:66479254-66480809	chr5	+	66479361	66480687	True	NM_015183,NM_005582	chr5,chr5	+,-	MAST4,CD180	-354808,11980
chr22:29197734-29198409	chr22	+	29197836	29198445	True	NM_005080,NM_173510,NM_001079539	chr22,chr22,chr22	-,+,-	XBP1,CCDC117,XBP1	-1276,-29225,-1276
chr11:121324507-121325280	chr11	+	121324526	121325312	True	NR_029671,NM_003105	chr11,chr11	-,+	MIR125B1,SORL1	645290,-1665
chr17:48503180-48503490	chr17	+	48503256	48503326	True	NM_025149,NM_018509	chr17,chr17	+,-	ACSF2,LRRC59	192,-28342
chr19:51512522-51512836	chr19	+	51512686	51512876	True	NM_012315,NM_144505,NM_144507,NM_144506,NM_014441,NM_007196	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,+,-	KLK9,KLK8,KLK8,KLK8,SIGLEC9,KLK8	64,-7728,-7728,-7728,115260,-7728
chr17:40762686-40763080	chr17	+	40762727	40762881	True	NM_001070,NR_026697,NM_178126	chr17,chr17,chr17	+,-,-	TUBG1,FAM134C,FAM134C	-1420,-1282,-1282
chr20:361251-361465	chr20	+	361356	361474	True	NM_021158,NM_144628	chr20,chr20	+,-	TRIB3,TBC1D20	-99,81763
chr16:86251831-86253233	chr16	+	86251988	86253171	True	NR_024406,NM_001451	chr16,chr16	-,+	LOC732275,FOXF1	126164,290961
chr8:145750842-145751127	chr8	+	145751012	145751130	True	NM_001001795,NM_001024678,NM_014665,NM_004260	chr8,chr8,chr8,chr8	-,-,+,-	C8orf82,LRRC24,LRRC14,RECQL4	3378,1336,-7700,-7802
chr22:17290771-17292618	chr22	+	17291002	17292405	True	NR_003607,NM_175878	chr22,chr22	+,-	HSFY1P1,XKR3	15958,10234
chr7:152372574-152372895	chr7	+	152372742	152372876	True	NM_005431,NM_001040135	chr7,chr7	-,+	XRCC2,ACTR3B	424,83974
chr5:37081962-37083228	chr5	+	37082229	37083080	True	NM_133433,NM_023073	chr5,chr5	+,-	NIPBL,C5orf42	-205428,166508
chr20:44246997-44248959	chr20	+	44247298	44248966	True	NM_147198,NM_080753	chr20,chr20	-,+	WFDC9,WFDC10A	10997,9418
chr11:133901447-133902369	chr11	+	133901543	133902131	True	NM_014987,NR_027276	chr11,chr11	-,+	IGSF9B,LOC100128239	-74663,35
chr20:747154-748090	chr20	+	747576	747972	True	NM_033409,NM_001042353	chr20,chr20	-,+	C20orf54,FAM110A	1306,66383
chr10:38672986-38674545	chr10	+	38673104	38674461	True	NR_027269,NR_003086	chr10,chr10	-,+	SEPT7L,HSD17B7P2	17376,-27847
chr21:38072030-38072241	chr21	+	38072087	38072215	True	NM_001146077,NM_005069,NM_009586	chr21,chr21,chr21	-,+,+	CLDN14,SIM2,SIM2	-123220,-147,-147
chr3:186476606-186477162	chr3	+	186476649	186476898	True	NM_001967,NM_002916	chr3,chr3	+,-	EIF4A2,RFC4	24462,47443
chr7:100880114-100881177	chr7	+	100880244	100881150	True	NM_014343,NM_006349,NM_016068,NM_001185080	chr7,chr7,chr7,chr7	-,+,-,-	CLDN15,ZNHIT1,FIS1,CLDN15	127,-19310,7271,1001
chr22:42896016-42896235	chr22	+	42896087	42896161	True	NR_027786,NM_015703	chr22,chr22	+,-	SERHL,RRP7A	423,19718
chr1:247509217-247510457	chr1	+	247509477	247510407	True	NM_032752,NM_001079821	chr1,chr1	-,+	ZNF496,NLRP3	-14432,69050
chr11:33277744-33278529	chr11	+	33277936	33278558	True	NM_001033506,NM_001048200,NM_005734	chr11,chr11,chr11	-,+,+	CSTF3,HIPK3,HIPK3	-94899,609,609
chr12:52969200-52969842	chr12	+	52969391	52969871	True	NM_175053,NM_002284	chr12,chr12	-,+	KRT74,KRT86	-1782,-273793
chr10:51828230-51828906	chr10	+	51828246	51828910	True	NM_018232,NM_001005751,NM_001143974	chr10,chr10,chr10	+,+,-	FAM21B,FAM21A,ASAH2	8975,-613,179510
chr10:51828230-51828906	chr10	+	46223246	46223847	False	NM_174890,NM_015262,NM_001169106,NM_001169107	chr10,chr10,chr10,chr10	-,+,+,+	ANUBL1,FAM21C,FAM21C,FAM21C	-54995,-649,-649,-649
chr20:48345574-48346024	chr20	+	48345708	48345775	True	NM_015266,NM_004776	chr20,chr20	+,-	SLC9A8,B4GALT5	83474,-15287
chrX:152082352-152083696	chrX	+	152082672	152083390	True	NM_001178108,NM_001178109,NM_001178106,NM_001178107,NM_001178113,NM_007150,NM_001178110,NM_001103150	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,+,+,-	ZNF185,ZNF185,ZNF185,ZNF185,ZNF185,ZNF185,ZNF185,PNMA5	35,35,35,35,3018,35,35,77421
chr16:77236654-77237582	chr16	+	77236696	77237465	True	NM_001129979,NM_199355	chr16,chr16	+,-	SYCE1L,ADAMTS18	-3415,231604
chr6:43023659-43023897	chr6	+	43023757	43023897	True	NM_015950,NM_001168370,NM_014780,NM_201521,NM_201523,NM_201522,NM_138343	chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,+,+,+,+	MRPL2,CUL7,CUL7,KLC4,KLC4,KLC4,KLC4	3395,-2074,-2074,3474,3731,4284,3474
chr1:161487719-161489410	chr1	+	161487809	161489224	True	NM_000569,NM_002155	chr1,chr1	-,+	FCGR3A,HSPA6	30660,4811
chr1:161487719-161489410	chr1	+	161569464	161570482	False	NM_000570,NR_024151	chr1,chr1	-,+	FCGR3B,HSPA7	30727,5366
chr18:48342326-48343692	chr18	+	48342499	48343641	True	NM_001168335,NM_031939,NM_001127176,NM_001127175,NM_001127174	chr18,chr18,chr18,chr18,chr18	+,-,-,-,-	ME2,MRO,MRO,MRO,MRO	61790,2843,2843,2843,8163
chr10:35416383-35416595	chr10	+	35416392	35416633	True	NM_182850,NM_182853,NM_181571,NM_183060,NM_001881,NM_001198777,NM_183013	chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,-,+	CREM,CREM,CREM,CREM,CREM,CUL2,CREM	-642,-642,-55,-55,-642,-36822,-642
chrX:144901650-144902901	chrX	+	144901659	144902922	True	NM_004709,NM_032539,NM_001144010,NM_001144003,NM_001144004,NM_001144005,NM_001144006,NR_030589,NM_001144008,NM_001144009	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,+,+,-,+,+	CXorf1,SLITRK2,SLITRK2,SLITRK2,SLITRK2,SLITRK2,SLITRK2,MIR890,SLITRK2,SLITRK2	6005,-2363,-57,-2363,-2363,-2363,-57,172997,-57,-57
chrY:59001206-59001644	chrY	+	59001426	59001656	True	NR_002179,NM_005840	chrY,chrY	-,+	TTTY17C,SPRY3	-31670506,98800
chr17:46653292-46653613	chr17	+	46653307	46653661	True	NM_024015,NR_029608,NM_002146,NR_033201	chr17,chr17,chr17,chr17	-,-,-,+	HOXB4,MIR10A,HOXB3,LOC404266	2132,3698,-1497,14161
chr8:124552346-124552611	chr8	+	124552382	124552628	True	NM_148177,NM_018024,NM_058229	chr8,chr8,chr8	-,+,-	FBXO32,WDYHV1,FBXO32	-7999,-123468,868
chr16:89040327-89040804	chr16	+	89040394	89040714	True	NM_005187,NM_016209	chr16,chr16	-,+	CBFA2T3,TRAPPC2L	2840,-116939
chr17:7348793-7349127	chr17	+	7348839	7348971	True	NM_004112,NM_001128833,NM_000747	chr17,chr17,chr17	+,-,+	FGF11,ZBTB4,CHRNB1	-6201,34023,-484
chr7:148723547-148724022	chr7	+	148723989	148724069	True	NM_004911,NM_020781	chr7,chr7	-,+	PDIA4,ZNF398	1763,99438
chr11:47276559-47277259	chr11	+	47276695	47277081	True	NM_001130102,NM_001610,NM_001130101,NM_001131064,NM_005693	chr11,chr11,chr11,chr11,chr11	+,-,+,-,+	NR1H3,ACP2,NR1H3,ACP2,NR1H3	-6297,-6238,2415,-6238,2415
chr22:39077447-39077822	chr22	+	39077453	39077760	True	NM_014876,NM_020243	chr22,chr22	-,+	JOSD1,TOMM22	18749,193
chr22:38347353-38347981	chr22	+	38347373	38347605	True	NM_032561,NM_021974	chr22,chr22	-,+	C22orf23,POLR2F	2048,2068
chr7:27143688-27144006	chr7	+	27143722	27143996	True	NM_005522,NM_153620,NM_006735,NR_002795	chr7,chr7,chr7,chr7	-,-,-,+	HOXA1,HOXA1,HOXA2,HOXA11-AS1	-8097,-8097,-1328,81030
chr9:119460389-119460914	chr9	+	119460450	119460880	True	NM_012210,NM_001184735	chr9,chr9	+,-	TRIM32,ASTN2	-10920,-10908
chr9:70980075-70981985	chr9	+	70981805	70981873	True	NR_015423,NM_021965	chr9,chr9	-,+	LOC572558,PGM5	-9048,-10047
chr1:144614171-144615143	chr1	+	144614859	144614923	True	NR_003242,NM_001037675	chr1,chr1	-,+	C1orf152,NBPF9	-2132,35
chr1:144614171-144615143	chr1	-	16918730	16918782	False	NR_037446,NM_017940	chr1,chr1	+,-	MIR3675,NBPF1	-43372,21250
chr1:144614171-144615143	chr1	+	145293147	145293197	False	NM_032305,NM_001039703	chr1,chr1	-,+	POLR3GL,NBPF10	177240,173
chr1:144614171-144615143	chr1	-	148346964	148347028	False	NM_001164262,NM_001170755	chr1,chr1	-,+	PPIAL4F,NBPF15	-144428,211159
chr15:40988492-40989389	chr15	+	40988770	40989265	True	NM_133487,NM_018145,NM_001164269,NM_001164270,NM_002875	chr15,chr15,chr15,chr15,chr15	+,-,+,+,+	RAD51,FAM82A2,RAD51,RAD51,RAD51	-1503,58252,-1452,-1503,-1503
chr15:43772394-43773734	chr15	+	43772738	43773534	True	NM_002373,NM_001141979	chr15,chr15	+,-	MAP1A,TP53BP1	36271,11884
chr17:76182386-76182821	chr17	+	76182424	76182504	True	NM_001010982,NR_027083,NM_001145526,NM_003258	chr17,chr17,chr17,chr17	+,+,+,-	AFMID,AFMID,AFMID,TK1	893,893,893,831
chr3:49130571-49130811	chr3	+	49130622	49130854	True	NM_199070,NM_017730,NM_198880	chr3,chr3,chr3	+,-,-	NDUFAF3,QRICH1,QRICH1	-71599,700,700
chr10:119302090-119302787	chr10	+	119302160	119302825	True	NM_004098,NR_002791,NM_001165924	chr10,chr10,chr10	+,-,+	EMX2,EMX2OS,EMX2	-255,1804,-255
chr1:160365193-160366188	chr1	+	160365226	160365832	True	NM_004371,NM_020335	chr1,chr1	-,+	COPA,VANGL2	-51872,4531
chr6:26687910-26688853	chr6	+	26687909	26688828	True	NM_013375,NM_024639	chr6,chr6	+,-	ABT1,ZNF322A	-90786,-27946
chr6:26687910-26688853	chr6	-	58181409	58181732	False	NM_000947,NR_003660	chr6,chr6	+,-	PRIM2,GUSBP4	-999039,106051
chrY:2369121-2369487	chrY	+	2369410	2369480	True	NM_001171135,NM_001171136,NM_004729,NM_145177,NR_033381	chrY,chrY,chrY,chrY,chrY	-,-,-,-,+	ZBED1,ZBED1,ZBED1,DHRSX,CD99P1	-830,-402,-402,-395,107825
chrY:2369121-2369487	chrX	+	2419410	2419480	False	NM_001171135,NM_001171136,NM_004729,NM_145177,NR_033381	chrX,chrX,chrX,chrX,chrX	-,-,-,-,+	ZBED1,ZBED1,ZBED1,DHRSX,CD99P1	-830,-402,-402,-395,107825
chr2:85183532-85183955	chr2	+	85183742	85183974	True	NM_020122,NM_001080824	chr2,chr2	+,-	KCMF1,C2orf89	14256,-75490
chr10:76818795-76819447	chr10	+	76818868	76819401	True	NM_001003892,NM_001174156	chr10,chr10	-,+	DUPD1,SAMD8	-596,51991
chr17:48625304-48625655	chr17	+	48625343	48625703	True	NM_022827,NM_001267	chr17,chr17	+,-	SPATA20,CHAD	-832,-79116
chr14:85996334-85996777	chr14	+	85996471	85996617	True	NM_013231,NM_000153	chr14,chr14	+,-	FLRT2,GALC	-34,2463048
chr22:50638118-50638407	chr22	+	50638156	50638302	True	NM_031454,NM_020461	chr22,chr22	+,-	SELO,TUBGCP6	1105,45148
chr4:42158343-42159740	chr4	+	42158449	42159683	True	NM_207406,NM_006345,NM_001159547	chr4,chr4,chr4	-,+,-	BEND4,SLC30A9,BEND4	-3554,-165984,-3554
chr2:170680970-170681225	chr2	+	170681002	170681185	True	NM_172070,NM_014168	chr2,chr2	+,-	UBR3,METTL5	2832,219
chr22:29704443-29704922	chr22	+	29704452	29704888	True	NM_006478,NM_152236,NM_152237,NM_001007279,NM_006477	chr22,chr22,chr22,chr22,chr22	+,+,+,-,-	GAS2L1,GAS2L1,GAS2L1,RASL10A,RASL10A	-1506,-1506,-1506,6910,6910
chr11:82784055-82784920	chr11	+	82784145	82784980	True	NM_015885,NM_014488	chr11,chr11	+,-	PCF11,RAB30	83156,-1261
chrX:48620721-48622224	chrX	+	48621171	48622257	True	NM_013271,NM_001080489	chrX,chrX	-,+	PCSK1N,GLOD5	71753,-1069
chr10:31321000-31321306	chr10	+	31321165	31321251	True	NM_001174093,NM_001143768,NM_182755,NR_026560,NM_001143771,NM_001143770,NM_001143766,NM_001143767	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,-,-,-,-,-,-,-	ZEB1,ZNF438,ZNF438,ZNF438,ZNF438,ZNF438,ZNF438,ZNF438	286849,-299,-299,-299,-299,-299,-299,-299
chrX:153209456-153209988	chrX	+	153209481	153209795	True	NM_003491,NM_002910,NM_003492	chrX,chrX,chrX	-,-,+	NAA10,RENBP,TMEM187	-9013,487,28195
chr1:109585730-109586088	chr1	+	109585770	109585893	True	NM_001142550,NM_001142551,NM_014969,NM_020141	chr1,chr1,chr1,chr1	-,-,-,+	WDR47,WDR47,WDR47,TMEM167B	-920,-920,-920,47509
chr11:111806400-111807689	chr11	+	111806407	111807716	True	NM_001885,NM_001037954	chr11,chr11	-,+	CRYAB,DIXDC1	-23934,210
chr14:23349506-23350382	chr14	+	23349591	23350415	True	NM_001077351,NM_173527,NM_014045	chr14,chr14,chr14	-,+,+	RBM23,REM2,LRP10	38031,2016,-8688
chr7:123299201-123299526	chr7	+	123299200	123299544	True	NM_207163,NM_003941	chr7,chr7	+,-	LMOD2,WASL	-3393,89622
chr4:186577908-186578138	chr4	+	186577967	186578159	True	NM_001114357,NM_001145674,NM_001145675	chr4,chr4,chr4	+,-,-	C4orf47,SORBS2,SORBS2	-227473,14,14
chr16:7391866-7393197	chr16	+	7391873	7393215	True	NM_001146336,NM_145891,NM_145892,NM_145893	chr16,chr16,chr16,chr16	-,+,+,+	TMEM114,RBFOX1,RBFOX1,RBFOX1	1229061,-9174,-9174,-9174
chr1:155990760-155991452	chr1	+	155990764	155991266	True	NM_014017,NM_003145	chr1,chr1	+,-	LAMTOR2,SSR2	33250,-6
chr4:47827351-47827927	chr4	+	47827397	47827620	True	NM_006587,NM_207330	chr4,chr4	-,+	CORIN,NIPAL1	12496,191170
chr13:114321950-114322335	chr13	+	114321960	114322384	True	NM_000705,NM_002929	chr13,chr13	-,+	ATP4B,GRK1	-9447,-414
chr7:92462488-92462720	chr7	+	92462491	92462631	True	NM_001259,NR_026902,NM_001145306	chr7,chr7,chr7	-,+,-	CDK6,MGC16142,CDK6	650,-294753,3360
chr3:37182943-37183210	chr3	+	37182942	37183192	True	NM_001172713,NM_001134369	chr3,chr3	+,-	GOLGA4,LRRFIP2	101489,34709
chr16:22449782-22451196	chr16	+	22449789	22450945	True	NR_027154,NR_027460	chr16,chr16	+,-	LOC641298,RRN3P3	-1511,-753
chr16:22449782-22451196	chr16	-	21942432	21943194	False	NM_173806,NM_003366	chr16,chr16	-,+	PDZD9,UQCRC2	69293,21414
chr16:22449782-22451196	chr16	-	21510937	21512093	False	NM_001077180,NR_027155	chr16,chr16	+,-	METTL9,LOC100271836	98762,1559
chr16:22449782-22451196	chr16	-	29605154	29605204	False	NR_002593,NM_001030288	chr16,chr16	-,+	SLC7A5P1,SPN	19884,69095
chr16:22449782-22451196	chr16	-	30345242	30345292	False	NR_002453,NM_013292	chr16,chr16	-,+	LOC595101,MYLPF	1453,40830
chr16:84177595-84178022	chr16	+	84177693	84177939	True	NM_031463,NM_001146051,NM_178452	chr16,chr16,chr16	-,-,+	HSDL1,HSDL1,LRRC50	911,911,925
chr11:1629691-1631145	chr11	+	1629692	1630346	True	NM_001012708,NM_001001480	chr11,chr11	-,+	KRTAP5-3,KRTAP5-5	1,20686
chr3:167452390-167452644	chr3	+	167452392	167452684	True	NM_007217,NM_145860,NM_005025,NM_001122752,NM_145859	chr3,chr3,chr3,chr3,chr3	-,-,+,+,-	PDCD10,PDCD10,SERPINI1,SERPINI1,PDCD10	-40,-4,826,747,17
chr6:28457884-28458148	chr6	+	28457886	28458186	True	NM_182701,NM_001509	chr6,chr6	-,+	GPX6,GPX5	25434,35602
chr12:48964513-48965326	chr12	+	48964825	48965137	True	NM_001005203,NM_002289	chr12,chr12	+,-	OR8S1,LALBA	-45468,-996
chr11:74178725-74179318	chr11	+	74178909	74179245	True	NM_006591,NM_005472	chr11,chr11	+,-	POLD3,KCNE3	124383,-309
chr1:111739867-111740452	chr1	+	111740010	111740470	True	NM_024901,NM_001025197	chr1,chr1	-,+	DENND2D,CHI3L2	2861,29810
chr7:152374742-152375224	chr7	+	152374762	152375274	True	NM_005431,NM_001040135	chr7,chr7	-,+	XRCC2,ACTR3B	-1512,81576
chr6:132126244-132126485	chr6	+	132126244	132126524	True	NM_006208,NM_001145659	chr6,chr6	+,-	ENPP1,CTAGE9	2631,-94087
chr11:17494373-17496118	chr11	+	17494432	17496150	True	NM_000352,NM_001202439	chr11,chr11	-,+	ABCC8,DKFZp686O24166	2350,-121174
chr16:89939419-89939619	chr16	+	89939425	89939637	True	NM_001018112,NM_014972	chr16,chr16	-,+	FANCA,TCF25	-56360,356
chr11:9685579-9685841	chr11	+	9685612	9685814	True	NR_033972,NM_015055	chr11,chr11	-,+	LOC440028,SWAP70	95316,-35
chr1:12949289-12949658	chr1	+	12949462	12949527	True	NM_001009611,NM_001012276,NM_001039361	chr1,chr1,chr1	-,+,-	PRAMEF4,PRAMEF8,PRAMEF10	-3437,26922,8622
chr1:12039806-12040112	chr1	+	12039861	12040153	True	NM_001127660,NM_014874,NM_138346	chr1,chr1,chr1	+,+,-	MFN2,MFN2,KIAA2013	84,84,-53376
chr3:100056770-100057833	chr3	+	100056988	100057816	True	NM_020202,NM_014820	chr3,chr3	+,-	NIT2,TOMM70A	-3480,62461
chr12:90036540-90037753	chr12	+	90036693	90037503	True	NM_001001323,NR_028138	chr12,chr12	-,+	ATP2B1,LOC338758	12401,65228
chr19:58546339-58547078	chr19	+	58546621	58547101	True	NM_182572,NM_025027	chr19,chr19	+,-	ZSCAN1,ZNF606	-1238,-31907
chr15:66582192-66583443	chr15	+	66582570	66583276	True	NM_133375,NM_001143688,NM_032445	chr15,chr15,chr15	+,+,-	DIS3L,DIS3L,MEGF11	2356,2643,-36495
chr18:45334445-45335982	chr18	+	45334552	45336022	True	NM_005901,NM_001142397	chr18,chr18	-,+	SMAD2,CTIF	120954,729404
chrY:6776419-6776944	chrY	+	6776620	6776961	True	NM_001143,NM_134259,NM_134258,NM_033284	chrY,chrY,chrY,chrY	-,+,+,+	AMELY,TBL1Y,TBL1Y,TBL1Y	-34552,1765,1765,1765
chr19:41726595-41727967	chr19	+	41726852	41727564	True	NM_001699,NM_000660,NM_021913	chr19,chr19,chr19	+,-,+	AXL,TGFB1,AXL	-1795,132317,-1795
chr1:235292264-235292845	chr1	+	235292284	235292703	True	NM_001037277,NR_002956,NM_014765	chr1,chr1,chr1	+,-,-	GGPS1,SNORA14B,TOMM20	199049,-1032,-28
chr2:207020909-207021834	chr2	+	207021052	207021688	True	NM_001959,NM_005006,NM_001037663,NM_021121,NR_002589,NR_002590,NM_001199984,NM_001199983,NM_001199982,NM_001199981	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,-,+,+,+,+,-,-,-,-	EEF1B2,NDUFS1,EEF1B2,EEF1B2,SNORD51,SNORA41,NDUFS1,NDUFS1,NDUFS1,NDUFS1	2629,2613,2629,2629,4916,5263,2288,2613,2613,2613
chr19:52403752-52404119	chr19	+	52403809	52403997	True	NM_023074,NM_001031721	chr19,chr19	-,+	ZNF649,ZNF613	4358,26690
chr1:1052387-1052598	chr1	+	1052582	1052646	True	NM_017891,NR_029639	chr1,chr1	-,+	C1orf159,MIR200B	-846,49837
chr3:15371959-15373282	chr3	+	15372008	15373267	True	NM_033083,NM_001018009,NM_004844	chr3,chr3,chr3	+,-,-	EAF1,SH3BP5,SH3BP5	95796,9684,887
chr1:187059432-187059805	chr1	+	187059450	187059584	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-409891,-261480
chr9:66957582-66957883	chr9	+	66957728	66957778	True	NR_024443,NR_024496	chr9,chr9	-,+	LOC100133920,LOC442421	73254,-463510
chr9:66957582-66957883	chr9	-	69724602	69724652	False	NM_001126334,NR_024443	chr9,chr9	-,+	FOXD4L5,LOC100133920	454213,-73292
chr14:60559050-60559422	chr14	+	60559074	60559470	True	NM_022495,NM_016029	chr14,chr14	+,-	C14orf135,DHRS7	-496,72791
chrX:153634752-153635818	chrX	+	153635302	153635402	True	NM_001009932,NM_001009933,NM_001009934,NM_000116,NM_006013,NM_006730,NM_181313,NM_181312,NM_181311,NR_026898,NR_000011,NR_024048	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,+,+,-,+,+,+,+,+,+	DNASE1L1,DNASE1L1,DNASE1L1,TAZ,RPL10,DNASE1L1,TAZ,TAZ,TAZ,RPL10,SNORA70,TAZ	5081,5081,5081,4474,-8788,2229,4474,4474,4474,-8788,-6737,4474
chr4:101418722-101419892	chr4	+	101418817	101419650	True	NM_001159694,NR_002799	chr4,chr4	-,+	EMCN,LOC256880	19660,-547236
chr8:145018814-145019344	chr8	+	145019007	145019327	True	NM_000837,NR_030383,NM_201379,NM_201384,NM_201381,NM_201380,NM_201383,NM_201382	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	+,-,-,-,-,-,-,-	GRINA,MIR661,PLEC,PLEC,PLEC,PLEC,PLEC,PLEC	44898,170,8811,-5249,-102,5767,-2315,-897
chr14:95616540-95617204	chr14	+	95616936	95617175	True	NR_015415,NM_177438,NM_030621	chr14,chr14,chr14	+,-,-	FLJ45244,DICER1,DICER1	6849,6641,-8881
chr18:48576951-48578389	chr18	+	48577059	48578086	True	NM_005359,NM_016626	chr18,chr18	+,-	SMAD4,MEX3C	-20532,146016
chr9:35070793-35071419	chr9	+	35070804	35071395	True	NM_007126,NM_203299,NM_004629	chr9,chr9,chr9	-,+,-	VCP,C9orf131,FANCG	1394,-28632,8668
chr1:117752393-117753589	chr1	+	117752462	117753588	True	NM_024626,NR_030640	chr1,chr1	-,+	VTCN1,MIR942	11,-115249
chr12:49392505-49392806	chr12	+	49392577	49392639	True	NM_015086,NM_005430	chr12,chr12	-,+	DDN,WNT1	499,-20392
chr2:132919432-132919797	chr2	+	132919447	132919845	True	NM_001508,NR_027019	chr2,chr2	+,-	GPR39,ANKRD30BL	254301,8
chr3:125558132-125559303	chr3	+	125558157	125558221	True	NR_024250,NR_031687	chr3,chr3	+,-	LOC100125556,MIR548I1	77222,-48762
chr17:1084970-1085181	chr17	+	1084986	1085230	True	NM_001164405,NM_021962,NM_001159746	chr17,chr17,chr17	+,-,-	BHLHA9,ABR,ABR	88627,-1855,5436
chr13:111817056-111817691	chr13	+	111817123	111817675	True	NM_017664,NM_003899	chr13,chr13	-,+	ANKRD10,ARHGEF7	-249707,-11113
chr13:103051561-103052565	chr13	+	103051633	103052343	True	NR_036487,NR_036486,NM_175929	chr13,chr13,chr13	+,-,-	LOC283481,LOC283480,FGF14	-4756,-4764,1831
chr5:140997855-140998089	chr5	+	140997875	140997964	True	NM_005219,NM_001130029,NM_001079812	chr5,chr5,chr5	-,+,-	DIAPH1,RELL2,DIAPH1	715,18552,715
chr11:75377361-75377716	chr11	+	75377441	75377672	True	NM_033063,NM_025098,NM_207577	chr11,chr11,chr11	-,+,-	MAP6,MOGAT2,MAP6	1864,51261,1864
chr8:143547222-143548303	chr8	+	143547277	143548351	True	NM_145003,NM_001702	chr8,chr8	-,+	TSNARE1,BAI1	-62734,-1951
chr17:54895808-54897121	chr17	+	54895909	54897109	True	NM_001085430,NM_003647	chr17,chr17	-,+	C17orf67,DGKE	-2659,14350
chr5:53662402-53663899	chr5	+	53662712	53663932	True	NM_006308,NM_019087	chr5,chr5	+,-	HSPB3,ARL15	87498,-56309
chr12:112450980-112451261	chr12	+	112450983	112451276	True	NM_001193453,NM_138341,NM_006817,NM_001193531,NM_001034025	chr12,chr12,chr12,chr12,chr12	-,-,+,-,+	TMEM116,TMEM116,ERP29,TMEM116,ERP29	-19,-19,53,-19,53
chr7:74653912-74654277	chr7	+	74653925	74654183	True	NR_002206,NM_001003795,NR_003580	chr7,chr7,chr7	-,+,-	GTF2IP1,GTF2IRD2B,LOC100093631	-480,-145629,-466
chr7:74653912-74654277	chr7	-	72568287	72568545	False	NR_002206,NR_003664,NR_003580	chr7,chr7,chr7	+,-,+	GTF2IP1,SPDYE8P,LOC100093631	480,-67978,466
chr7:74653912-74654277	chr7	-	74378697	74378777	False	NM_001025202,NM_001145063	chr7,chr7	-,+	STAG3L2,GATSL1	-71966,305
chr7:74653912-74654277	chr7	+	74868182	74868370	False	NM_001145064,NR_003664	chr7,chr7	-,+	GATSL2,SPDYE8P	-841,68162
chr9:99068946-99069543	chr9	+	99069058	99069424	True	NM_014282,NM_000197	chr9,chr9	+,-	HABP4,HSD17B3	142989,-4624
chr3:49510822-49511646	chr3	+	49510913	49511001	True	NM_001177639,NM_001177638,NM_001177635,NM_001177634,NM_001177637,NM_001177636,NM_004393,NM_001165928,NM_032316,NM_001177644,NM_001177640,NM_001177641,NM_001177642,NM_001177643	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,+,+,+,+,-,+,+,+,+,+	DAG1,DAG1,DAG1,DAG1,DAG1,DAG1,DAG1,DAG1,NICN1,DAG1,DAG1,DAG1,DAG1,DAG1	-3399,-3399,-3399,-3399,-3399,-3399,-3399,-3399,-44156,-3399,-3399,-3399,-3399,-4818
chr1:32110939-32111166	chr1	+	32110953	32111035	True	NR_033688,NR_033686,NM_001525,NM_012392	chr1,chr1,chr1,chr1	-,-,+,-	PEF1,PEF1,HCRTR1,PEF1	-735,-115,-27703,-115
chrX:40945917-40947327	chrX	+	40946085	40947162	True	NM_001039591,NM_001039590,NR_027761	chrX,chrX,chrX	+,+,-	USP9X,USP9X,LOC100132831	-1249,-1249,-253636
chr7:23720003-23720489	chr7	+	23720059	23720419	True	NM_199136,NR_002711,NM_001127364,NM_001127365	chr7,chr7,chr7,chr7	+,-,+,+	C7orf46,CLK2P,C7orf46,C7orf46	-362,-93913,-362,-362
chr16:30107935-30108664	chr16	+	30107965	30108705	True	NR_027081,NM_004608,NM_001145524,NM_031477	chr16,chr16,chr16,chr16	+,-,-,-	LOC100271831,TBX6,YPEL3,YPEL3	16727,-4760,-428,-444
chr6:80871250-80871827	chr6	+	80871420	80871817	True	NM_183050,NM_022726	chr6,chr6	+,-	BCKDHB,ELOVL4	-55134,-214105
chr1:224034244-224034489	chr1	+	224034244	224034366	True	NM_001031685,NM_005426,NM_001748	chr1,chr1,chr1	-,-,+	TP53BP2,TP53BP2,CAPN2	-570,-570,-134176
chr15:26109243-26109663	chr15	+	26109442	26109704	True	NM_024490,NR_001295	chr15,chr15	-,+	ATP10A,SNORD109A	-1093,-586003
chr7:56161077-56162082	chr7	+	56161376	56161446	True	NM_015411,NM_006213	chr7,chr7	+,-	SUMF2,PHKG1	-29510,-687
chr9:23824189-23824418	chr9	+	23824235	23824317	True	NM_022160,NM_004432,NM_001171197,NM_001171195	chr9,chr9,chr9,chr9	+,-,-,-	DMRTA1,ELAVL2,ELAVL2,ELAVL2	-1377454,1796,-2757,-2392
chr19:48110679-48110983	chr19	+	48110907	48110975	True	NM_015711,NM_001101419	chr19,chr19	+,-	GLTSCR1,ZNF541	477,-51794
chr20:42580071-42580695	chr20	+	42580223	42580336	True	NM_001098798,NM_176791	chr20,chr20	+,-	TOX2,GTSF1L	-5746,-224581
chr13:113951939-113952226	chr13	+	113952085	113952269	True	NM_024719,NM_005561	chr13,chr13	-,+	GRTP1,LAMP1	66244,-667
chr6:88298704-88298976	chr6	+	88298703	88298909	True	NM_020320,NM_181837,NM_012381,NM_001197259	chr6,chr6,chr6,chr6	-,+,+,+	RARS2,ORC3,ORC3,ORC3	882,875,875,875
chr12:58243322-58243756	chr12	+	58243527	58243797	True	NM_005730,NM_001172697	chr12,chr12	-,+	CTDSP2,TSFM	-2780,-67052
chr19:3225239-3225449	chr19	+	3225277	3225457	True	NR_033342,NM_198969,NM_021938,NM_001172673	chr19,chr19,chr19,chr19	+,-,+,+	CELF5,AES,CELF5,CELF5	25,-162313,-627,-626
chr5:43549133-43549520	chr5	+	43549339	43549409	True	NM_182789,NM_006451,NM_012343,NM_183323	chr5,chr5,chr5,chr5	-,-,+,-	PAIP1,PAIP1,NNT,PAIP1	7836,7836,53381,8162
chr3:11609624-11610102	chr3	+	11609646	11610129	True	NM_006395,NM_001128221	chr3,chr3	+,-	ATG7,VGLL4	-295687,320
chr12:57830873-57831172	chr12	+	57831046	57831176	True	NM_005538,NM_001080156	chr12,chr12	+,-	INHBC,ARHGAP9	-2560,40602
chr8:92135374-92136762	chr8	+	92135373	92136770	True	NM_001129890,NM_018710	chr8,chr8	+,-	LRRC69,TMEM55A	-20580,-82170
chr1:41485344-41486100	chr1	+	41485536	41486092	True	NR_037868,NM_144990,NM_001168247	chr1,chr1,chr1	+,-,-	LOC100507178,SLFNL1,SLFNL1	-5327,1385,1355
chr11:31391566-31393285	chr11	+	31391569	31392834	True	NM_181706,NM_181807	chr11,chr11	+,-	DNAJC24,DCDC1	-243,-212
chr10:75174844-75175393	chr10	+	75174933	75175270	True	NM_173348,NM_001156,NM_004034	chr10,chr10,chr10	+,-,-	FAM149B1,ANXA7,ANXA7	-247107,-1092,-1092
chr5:9846549-9848012	chr5	+	9846697	9848061	True	NR_003689,NR_027112	chr5,chr5	+,-	SNORD123,LOC285692	-297821,55925
chr7:135346030-135347100	chr7	+	135346048	135346994	True	NM_001130929,NM_012450	chr7,chr7	+,-	PL-5283,SLC13A4	226,65989
chr17:37120836-37121106	chr17	+	37120948	37121018	True	NR_033753,NM_001008777	chr17,chr17	+,-	FLJ43826,FBXO47	65140,2697
chr2:232827438-232829081	chr2	+	232827901	232829113	True	NM_024409,NM_152383	chr2,chr2	-,+	NPPC,DIS3L2	-36942,-1663
chr9:98269069-98269423	chr9	+	98269154	98269458	True	NM_001010895,NM_001083607,NM_001083602,NM_001083603,NM_001083604,NM_001083605,NM_001083606,NM_000264	chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9	+,-,-,-,-,-,-,-	C9orf102,PTCH1,PTCH1,PTCH1,PTCH1,PTCH1,PTCH1,PTCH1	368441,73,9839,9839,914,914,291,1423
chr19:4867010-4867548	chr19	+	4867026	4867459	True	NM_005817,NM_001048201,NM_001164189,NM_001164194	chr19,chr19,chr19,chr19	-,+,-,-	PLIN3,UHRF1,PLIN3,PLIN3	371,42050,371,371
chr19:11545282-11546231	chr19	+	11545457	11546261	True	NM_001001329,NM_145045,NM_002743	chr19,chr19,chr19	+,-,+	PRKCSH,CCDC151,PRKCSH	7,-37,7
chrX:101177456-101179243	chrX	+	101177699	101178469	True	NM_001011657,NM_080390	chrX,chrX	-,+	ZMAT1,TCEAL2	8620,202190
chr1:151300048-151301026	chr1	+	151300104	151300690	True	NM_002651,NM_001198775,NM_001198774,NM_001198773,NM_020832	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	PI4KB,PI4KB,PI4KB,PI4KB,ZNF687	29,29,-69,29,-45364
chr10:101769026-101769268	chr10	+	101769100	101769296	True	NM_015221,NR_024130	chr10,chr10	-,+	DNMBP,DNMBP-AS1	430,-82185
chr18:12703312-12703530	chr18	+	12703320	12703580	True	NM_020232,NM_024899	chr18,chr18	+,-	PSMG2,CEP76	-384,-617
chr12:33047020-33047320	chr12	+	33047151	33047369	True	NM_001005242,NM_004572,NM_012063	chr12,chr12,chr12	-,-,+	PKP2,PKP2,DNM1L	2461,2461,-215072
chr3:69102186-69103569	chr3	+	69102294	69103071	True	NM_007114,NR_036087,NM_006407	chr3,chr3,chr3	-,-,+	TMF1,MIR3136,ARL6IP5	-810,-4108,31018
chr2:171786793-171787085	chr2	+	171786798	171787133	True	NM_015530,NM_001136555,NM_001201428	chr2,chr2,chr2	+,-,+	GORASP2,TLK1,GORASP2	-1813,136407,-1901
chr4:88141430-88141637	chr4	+	88141471	88141637	True	NM_020803,NM_024047	chr4,chr4	-,+	KLHL8,NUDT9	87,202097
chr16:2034777-2035688	chr16	+	2034929	2035633	True	NM_144603,NM_172168,NM_004209,NM_172167,NM_005262	chr16,chr16,chr16,chr16,chr16	-,-,+,-,+	NOXO1,NOXO1,SYNGR3,NOXO1,GFER	-3489,-3745,4312,-3745,-830
chr3:125903090-125903399	chr3	+	125903184	125903291	True	NM_012190,NM_182628	chr3,chr3	-,+	ALDH1L1,CCDC37	-3699,210490
chr4:90753051-90754786	chr4	+	90753341	90754523	True	NM_000345,NM_001146054,NM_007351,NM_001146055,NM_007308	chr4,chr4,chr4,chr4,chr4	-,-,+,-,-	SNCA,SNCA,MMRN1,SNCA,SNCA	3877,3654,61528,4974,3654
chr16:56665105-56665868	chr16	+	56665319	56665699	True	NM_005946,NM_175617,NR_036677,NM_176870,NM_005950	chr16,chr16,chr16,chr16,chr16	+,+,+,+,-	MT1A,MT1E,MT1JP,MT1M,MT1G	6878,-5792,3951,834,36328
chr2:27006473-27006926	chr2	+	27006606	27006708	True	NM_001029881,NM_001809,NM_001042426	chr2,chr2,chr2	-,+,+	CIB4,CENPA,CENPA	-142395,2173,2174
chr17:43698437-43699701	chr17_ctg5_hap1	-	1168412	1169709	False	NR_027295,NR_026901,NR_037772,NR_026680	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	-,+,-,-	MGC57346,LOC644172,CRHR1,MGC57346	523,18729,794,792
chr17:43698437-43699701	chr17_ctg5_hap1	+	564246	565543	False	NM_001193465,NR_034172	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	KIAA1267,LOC644246	-799,29899
chr17:43698437-43699701	chr17	+	43698453	43699749	True	NR_027295,NR_026901,NR_037772,NR_026680	chr17,chr17,chr17,chr17	+,-,+,+	MGC57346,LOC644172,CRHR1,MGC57346	-523,-18705,-794,-792
chr17:43698437-43699701	chr17	-	44300694	44301991	False	NM_001193465,NR_034172	chr17,chr17	-,+	KIAA1267,LOC644246	799,-29812
chrX:134884431-134885312	chrX	+	134884549	134885293	True	NM_001017436,NM_001017435	chrX,chrX	-,+	CT45A4,CT45A3	51497,-1112
chrX:134884431-134885312	chrX	+	134867279	134868022	False	NM_152582,NM_001017436	chrX,chrX	+,+	CT45A2,CT45A4	-1116,-1116
chrX:134884431-134885312	chrX	-	134934926	134935669	False	NM_018666,NM_001017436	chrX,chrX	+,-	SAGE1,CT45A4	40115,1116
chrX:134884431-134885312	chrX	-	134969438	134970182	False	NM_001017438,NM_018666	chrX,chrX	-,+	CT45A6,SAGE1	1112,5602
chrX:134884431-134885312	chrX	-	134952189	134952932	False	NM_001007551,NM_018666,NM_001172288	chrX,chrX,chrX	-,+,-	CT45A5,SAGE1,CT45A5	1112,22852,1112
chr4:39403922-39405509	chr4	+	39404245	39405440	True	NM_002913,NM_175737	chr4,chr4	-,+	RFC1,KLB	-36244,3032
chr16:30799281-30799764	chr16	+	30799290	30799572	True	NM_001080417,NM_014771	chr16,chr16	-,+	ZNF629,RNF40	-767,-25711
chr14:93605339-93606066	chr14	+	93605550	93605889	True	NM_015676,NM_014216	chr14,chr14	+,-	C14orf109,ITPK1	45406,-23287
chr4:10463095-10463521	chr4	+	10463325	10463563	True	NM_000798,NM_053042	chr4,chr4	+,-	DRD5,ZNF518B	-680118,-4293
chr17:48045042-48045791	chr17	+	48045094	48045672	True	NM_001934,NM_005220,NM_138281	chr17,chr17,chr17	+,-,+	DLX4,DLX3,DLX4	4457,26966,889
chr10:126137845-126138169	chr10	+	126137885	126138035	True	NM_001146340,NM_001167880	chr10,chr10	-,+	NKX1-2,LHPP	565,12305
chr6:32807352-32808594	chr6_qbl_hap6	+	4039526	4039596	False	NM_148919,NM_004159,NR_037174,NR_037175,NR_037176,NM_018833,NM_000544,NR_037173	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	-,-,+,+,+,-,-,+	PSMB8,PSMB8,LOC100507463,LOC100507463,LOC100507463,TAP2,TAP2,LOC100507463	4381,5277,4373,4373,4373,-871,-871,4373
chr6:32807352-32808594	chr6	+	32807419	32807489	True	NM_148919,NM_004159,NR_037174,NR_037175,NR_037176,NM_018833,NM_000544,NR_037173	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,-,+,+,+,-,-,+	PSMB8,PSMB8,LOC100507463,LOC100507463,LOC100507463,TAP2,TAP2,LOC100507463	4381,5277,4373,4373,4373,-872,-872,4373
chr6:32807352-32808594	chr6_mann_hap4	+	4264615	4264685	False	NM_148919,NM_004159,NR_037174,NR_037175,NR_037176,NM_018833,NM_000544,NR_037173	chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4	-,-,+,+,+,-,-,+	PSMB8,PSMB8,LOC100507463,LOC100507463,LOC100507463,TAP2,TAP2,LOC100507463	4381,5277,4373,4373,4373,-871,-871,4373
chr6:32807352-32808594	chr6_cox_hap2	+	4251947	4252017	False	NM_148919,NM_004159,NR_037174,NR_037175,NR_037176,NM_018833,NM_000544,NR_037173	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	-,-,+,+,+,-,-,+	PSMB8,PSMB8,LOC100507463,LOC100507463,LOC100507463,TAP2,TAP2,LOC100507463	4381,5277,4373,4373,4373,-872,-872,4373
chr19:45457872-45458247	chr19	+	45457920	45458292	True	NM_001199468,NM_001294,NM_000483,NM_145288	chr19,chr19,chr19,chr19	+,+,+,-	CLPTM1,CLPTM1,APOC2,ZNF296	306,306,-8732,121446
chr1:46856814-46857610	chr1	+	46856862	46857658	True	NM_001441,NM_006369	chr1,chr1	+,-	FAAH,LRRC41	2280,-87824
chr7:6958312-6959071	chr7	+	6958822	6959006	True	NM_198097,NM_173565	chr7,chr7	-,+	C7orf28B,RSPH10B	-92896,-165133
chr7:6958312-6959071	chr7	-	6953116	6953188	False	NM_198097,NM_173565	chr7,chr7	-,+	C7orf28B,RSPH10B	-87190,-159427
chr15:40697352-40697945	chr15	+	40697434	40697890	True	NM_207380,NM_002225,NM_001159508	chr15,chr15,chr15	-,+,+	C15orf52,IVD,IVD	-64266,33,33
chr12:110337758-110338094	chr12	+	110337887	110338107	True	NM_032300,NM_016433,NM_001143852	chr12,chr12,chr12	+,-,+	TCHP,GLTP,TCHP	215,-19594,-29
chr2:178133613-178135172	chr2	+	178133795	178135200	True	NM_194247,NM_006164,NM_001145412,NM_001145413	chr2,chr2,chr2,chr2	+,-,-,-	HNRNPA3,NFE2L2,NFE2L2,NFE2L2	-56424,-3936,-5178,-5178
chr19:7050594-7051176	chr19	+	7050850	7050940	True	NM_144614,NM_001164425	chr19,chr19	+,-	MBD3L2,MBD3L3	-1550,7755
chr19:7050594-7051176	chr19	-	7019852	7019942	False	NR_024372,NM_001136507	chr19,chr19	-,+	FLJ25758,MBD3L5	-13426,10651
chr12:57163701-57165333	chr12	+	57163789	57165147	True	NM_000946,NM_003725	chr12,chr12	-,+	PRIM1,HSD17B6	-17643,-6732
chr1:99470935-99472429	chr1	+	99471054	99472458	True	NM_001010861,NM_001037317,NR_033940	chr1,chr1,chr1	-,-,+	LPPR5,LPPR5,LOC100129620	-605,-605,-1273
chr3:69100204-69100480	chr3	+	69100212	69100337	True	NM_007114,NR_036087,NM_006407	chr3,chr3,chr3	-,-,+	TMF1,MIR3136,ARL6IP5	1198,-2026,33752
chr2:219472605-219473581	chr2	+	219472858	219473514	True	NM_020935,NM_032726	chr2,chr2	-,+	USP37,PLCD4	-39774,-421
chr16:28964350-28966172	chr16	+	28964854	28966130	True	NM_024816,NM_032815	chr16,chr16	-,+	RABEP2,NFATC2IP	-28322,-2587
chr3:154026402-154026732	chr3	+	154026472	154026718	True	NM_015595,NM_001114397	chr3,chr3	+,-	ARHGEF26,DHX36	-187382,15618
chr6:36240244-36240492	chr6	+	36240272	36240486	True	NM_001145717,NM_001010903	chr6,chr6	+,-	PNPLA1,C6orf222	-2090,64226
chr8:678411-678743	chr8	+	678574	678776	True	NM_207332,NM_183421	chr8,chr8	-,+	ERICH1,FBXO25	2500,-321817
chrX:99666731-99667120	chrX	+	99666731	99667107	True	NM_001105243,NM_001184880,NM_022144,NM_020766	chrX,chrX,chrX,chrX	-,-,+,-	PCDH19,PCDH19,TNMD,PCDH19	-1460,-1460,172682,-1460
chrX:100222512-100222765	chrX	+	100222657	100222774	True	NM_212559,NM_001012990,NM_001162491,NM_001162490	chrX,chrX,chrX,chrX	-,+,+,+	XKRX,ARL13A,ARL13A,ARL13A	-38759,1922,1922,1922
chr15:38544014-38544294	chr15	+	38544231	38544319	True	NM_152594,NM_001128602	chr15,chr15	+,-	SPRED1,RASGRP1	732,312738
chrX:77367623-77369318	chrX	+	77368193	77369270	True	NM_000291,NM_015975	chrX,chrX	+,-	PGK1,TAF9B	-8579,25959
chrX:18373115-18373381	chrX	+	18373169	18373381	True	NM_006089,NR_033717,NM_003159	chrX,chrX,chrX	-,-,+	SCML2,SCML2,CDKL5	-325,-325,70343
chr5:149377446-149379099	chr5	+	149377711	149379071	True	NM_014983,NM_030953	chr5,chr5	+,-	HMGXB3,TIGD6	1097,1196
chr15:31614227-31615881	chr15	+	31614522	31615884	True	NM_015995,NM_002420	chr15,chr15	+,-	KLF13,TRPM1	3198,-220598
chr11:129816035-129817061	chr11	+	129816207	129816969	True	NR_024233,NM_199439,NM_199438	chr11,chr11,chr11	+,-,-	NCRNA00167,PRDM10,PRDM10	55549,598,598
chr10:70478055-70478684	chr10	+	70478162	70478462	True	NM_018237,NM_152707	chr10,chr10	+,-	CCAR1,SLC25A16	2508,-190882
chr1:201925938-201926986	chr1	+	201926153	201926685	True	NM_006335,NM_012134	chr1,chr1	+,-	TIMM17A,LMOD1	-1592,-10437
chr9:6755470-6756436	chr9	+	6755585	6756439	True	NM_000170,NM_015061,NM_001146695,NM_001146694	chr9,chr9,chr9,chr9	-,+,+,+	GLDC,KDM4C,KDM4C,KDM4C	-109893,1201,1201,1201
chr14:77603919-77605491	chr14	+	77604036	77605262	True	NM_174976,NM_033426	chr14,chr14	-,+	ZDHHC22,KIAA1737	2922,-39509
chr11:82994724-82996666	chr11	+	82995277	82996638	True	NM_182603,NM_021825	chr11,chr11	+,-	ANKRD42,CCDC90B	-90038,789
chr5:10614275-10614853	chr5	+	10614353	10614730	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-49973,146714
chr7:75026917-75027846	chr7	+	75027137	75027770	True	NM_198853,NM_198924,NR_003614	chr7,chr7,chr7	+,+,-	TRIM74,TRIM73,PMS2L2	-2285,-2285,-38922
chr7:75026917-75027846	chr7	-	72739314	72739505	False	NM_001135211,NM_003602,NM_178125	chr7,chr7,chr7	+,+,-	FKBP6,FKBP6,TRIM50	2649,2794,2630
chr7:75026917-75027846	chr7	-	72437131	72437764	False	NR_033323,NR_003602	chr7,chr7	-,+	NSUN5P2,LOC541473	-11829,2427
chr3:190595264-190595814	chr3	+	190595276	190595857	True	NR_024343,NM_001146686	chr3,chr3	+,-	SNAR-I,GEMC1	-65,-14811
chr11:76091362-76091602	chr11	+	76091396	76091530	True	NM_020193,NM_004705	chr11,chr11	+,-	C11orf30,PRKRIR	64538,400
chr16:33138313-33138683	chr16	+	33138370	33138728	True	NR_033866,NM_016212	chr16,chr16	-,+	LOC390705,TP53TG3	160024,66251
chr16:33138313-33138683	chr16	-	32754321	32754679	False	NM_016212	chr16	-	TP53TG3	-66268
chr16:33138313-33138683	chr16	+	32197391	32197751	False	NR_002827,NM_003414	chr16,chr16	-,+	HERC2P4,ZNF267	-33517,-312372
chr2:155554190-155554560	chr2	+	155554275	155554527	True	NM_019845,NM_002239	chr2,chr2	-,+	RPRM,KCNJ3	-1218953,565
chr13:20765816-20766311	chr13	+	20765873	20766292	True	NM_004004,NM_001190965	chr13,chr13	-,+	GJB2,ZMYM2	872,-232950
chr22:16202195-16204000	chr22	+	16202249	16203981	True	NR_001591,NM_001136213	chr22,chr22	+,-	psiTPTE22,POTEH	878819,84006
chr22:16202195-16204000	chr14	+	19934612	19936346	False	NM_001145442,NM_172194	chr14,chr14	-,+	POTEM,OR4Q3	83976,279240
chr22:16202195-16204000	chr14	-	19639041	19640775	False	NM_001145442,NR_027480	chr14,chr14	-,+	POTEM,POTEG	379547,-85727
chr6:133120635-133121253	chr6	+	133120789	133121200	True	NM_052831,NM_001016	chr6,chr6	-,+	C6orf192,RPS12	-1042,14507
chr13:30162731-30163616	chr13	+	30163014	30163590	True	NM_015233,NM_003045	chr13,chr13	+,-	MTUS2,SLC7A1	-160288,6285
chr3:185435835-185437828	chr3	+	185435981	185437809	True	NM_001007225,NR_027317	chr3,chr3	-,+	IGF2BP2,C3orf65	105068,-4992
chr1:21605866-21607196	chr1	+	21606265	21607079	True	NM_001113347,NM_032264,NM_001113349,NM_001397	chr1,chr1,chr1,chr1	-,+,-,-	ECE1,NBPF3,ECE1,ECE1	-82,159551,9737,9953
chr4:169341469-169342530	chr4	+	169341473	169342231	True	NM_001012967,NM_001166108	chr4,chr4	-,+	DDX60L,PALLD	59469,75985
chr19:39879618-39880913	chr19	+	39879727	39880815	True	NM_019088,NM_017592	chr19,chr19	-,+	PAF1,MED29	914,1147
chr10:98500800-98501570	chr10	+	98500805	98501619	True	NM_152309,NM_001170765	chr10,chr10	-,+	PIK3AP1,LCOR	-20526,90397
chr10:103351597-103352492	chr10	+	103351879	103351959	True	NM_015448,NM_001174085,NM_001174084,NR_036115,NR_036114,NR_033406,NM_013274	chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,-,-,-,+,-,-	DPCD,POLL,POLL,MIR3158-2,MIR3158-1,POLL,POLL	-3851,-3852,-3852,9345,9214,-3852,-3852
chr11:47431958-47433010	chr11	+	47432209	47432894	True	NM_002804,NM_001128225,NM_152264	chr11,chr11,chr11	-,+,+	PSMC3,SLC39A13,SLC39A13	15193,-2214,-2214
chr17:73104628-73105042	chr17	+	73104633	73105038	True	NM_014595,NM_024585	chr17,chr17	-,+	NT5C,ARMC7	22890,1043
chr6:43859304-43859565	chr6	+	43859332	43859458	True	NR_024478,NM_018135	chr6,chr6	+,-	LOC100132354,MRPS18A	-618,-203783
chr12:108725623-108726027	chr12	+	108725718	108726048	True	NM_001142344,NM_004072,NM_007076,NM_001142343	chr12,chr12,chr12,chr12	-,-,+,-	CMKLR1,CMKLR1,FICD,CMKLR1	7096,7096,183002,7096
chr12:102454655-102455015	chr12	+	102454767	102455051	True	NM_017915,NM_016053	chr12,chr12	+,-	C12orf48,CCDC53	58904,898
chr4:184018890-184019193	chr4	+	184018924	184019104	True	NR_024008,NM_024949	chr4,chr4	-,+	C4orf38,WWC2	1298,1358
chr1:29561706-29562599	chr1	+	29561883	29562587	True	NM_016011,NM_133177,NM_133178,NM_001195001,NM_001024732,NM_005704	chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,+,-,+	MECR,PTPRU,PTPRU,PTPRU,MECR,PTPRU	-4429,440,440,440,-4429,440
chrX:50163084-50163460	chrX	+	50163083	50163503	True	NM_033670,NM_001013742	chrX,chrX	+,-	CCNB3,DGKK	-135595,50268
chr11:58673187-58673575	chr11	+	58673307	58673595	True	NM_145016,NM_080661	chr11,chr11	-,+	GLYATL2,GLYATL1	-61310,37126
chr11:65221182-65221927	chr11	+	65221339	65221975	True	NR_030343,NM_182556	chr11,chr11	+,-	MIR612,SLC25A45	-9462,-71197
chr2:163035045-163036409	chr2	+	163035107	163036260	True	NM_012198,NM_002054	chr2,chr2	+,-	GCA,GCG	164322,-26193
chr7:139025238-139025793	chr7	+	139025244	139025654	True	NR_033999,NM_197964	chr7,chr7	-,+	LOC100129148,C7orf55	86668,242
chr14:68090125-68090349	chr14	+	68090125	68090256	True	NM_001172,NM_004569	chr14,chr14	+,-	ARG2,PIGH	-3605,-23108
chr1:110156758-110157973	chr1	+	110156868	110157644	True	NM_139156,NM_005272,NM_004037	chr1,chr1,chr1	+,-,+	AMPD2,GNAT2,AMPD2	4814,-1163,5631
chr17:73583359-73583872	chr17	+	73583360	73583920	True	NR_003587,NM_020753	chr17,chr17	+,-	MYO15B,CASKIN2	218,-71733
chr2:190527596-190528070	chr2	+	190527690	190527847	True	NM_019048,NM_014585	chr2,chr2	+,-	ASNSD1,SLC40A1	-1620,-82153
chr19:47848923-47849234	chr19	+	47848936	47849142	True	NM_001009813,NM_014681,NM_018485	chr19,chr19,chr19	-,+,+	MEIS3,DHX34,GPR77	73697,3395,-8625
chr7:129927357-129928831	chr7	+	129927564	129928880	True	NM_032842,NM_001163446,NM_016352	chr7,chr7,chr7	-,+,+	TMEM209,CPA4,CPA4	-82226,4093,4093
chr5:156385205-156386770	chr5	+	156385509	156386718	True	NM_138379,NM_001146726,NR_028472	chr5,chr5,chr5	-,-,+	TIMD4,TIMD4,LOC100286948	3598,3598,-34461
chr10:85932487-85933796	chr10	+	85932643	85933505	True	NM_001017924,NM_207373	chr10,chr10	-,+	LRIT2,C10orf99	51829,48
chr12:30906912-30907384	chr12	+	30906944	30907312	True	NM_023925,NM_001002259,NM_032156,NM_001080509	chr12,chr12,chr12,chr12	-,-,-,+	CAPRIN2,CAPRIN2,CAPRIN2,TSPAN11	186,186,186,172525
chr20:5583861-5584551	chr20	+	5583995	5584394	True	NM_019593,NR_029405	chr20,chr20	-,+	GPCPD1,LOC643406	7335,-132205
chr15:73662256-73663284	chr15	+	73662255	73663219	True	NM_001042367,NM_005477	chr15,chr15	+,-	C15orf60,HCN4	72279,-650
chr1:1283144-1283418	chr1	+	1283334	1283418	True	NM_152228,NM_004421	chr1,chr1	+,-	TAS1R3,DVL1	-16659,1124
chr6:146918367-146920069	chr6	+	146918423	146919868	True	NM_024694,NR_003954	chr6,chr6	+,-	C6orf103,LOC729176	267,205143
chr11:57106621-57108474	chr11	+	57106646	57108222	True	NM_002559,NM_003146	chr11,chr11	+,-	P2RX3,SSRP1	-748,-3295
chr6:168474297-168474498	chr6	+	168474324	168474454	True	NM_030615,NM_001122841,NM_024919	chr6,chr6,chr6	+,-,-	KIF25,FRMD1,FRMD1	-55822,2128,5435
chr11:118900661-118901004	chr11	+	118900673	118900759	True	NR_037429,NM_001164280,NM_001164279,NM_001164278,NM_001467,NM_001164277	chr11,chr11,chr11,chr11,chr11,chr11	+,-,-,-,-,-	MIR3656,SLC37A4,SLC37A4,SLC37A4,SLC37A4,SLC37A4	-11070,-395,915,915,915,915
chr10:102243117-102244333	chr10	+	102243183	102244247	True	NM_015490,NM_003393	chr10,chr10	-,+	SEC31B,WNT8B	35398,-20422
chr18:47806334-47807273	chr18	+	47806555	47807311	True	NM_001204137,NM_001101654,NM_001204136,NM_001204139,NM_015844,NM_015847,NM_015846,NM_001204140,NM_001204141,NM_001204151,NM_001204143,NM_001039535,NM_015845,NM_002384,NM_014593,NM_001204142,NM_001204138	chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18	-,-,-,-,-,-,-,-,-,-,-,+,-,-,-,-,-	MBD1,CXXC1,MBD1,MBD1,MBD1,MBD1,MBD1,MBD1,MBD1,MBD1,MBD1,SKA1,MBD1,MBD1,CXXC1,MBD1,MBD1	883,7431,883,883,883,883,883,883,883,-168,876,94080,883,883,7431,883,883
chrX:15805855-15807424	chrX	+	15806106	15807210	True	NR_002725,NM_005089	chrX,chrX	-,+	INE2,ZRSR2	-394,1363
chr4:110834430-110834651	chr4	+	110834468	110834652	True	NM_001178131,NM_001178130,NM_001963,NM_000204	chr4,chr4,chr4,chr4	+,+,+,-	EGF,EGF,EGF,CFI	-493,-493,-493,-111133
chr2:101997671-101998209	chr2	+	101997682	101998030	True	NM_017546,NM_153836	chr2,chr2	+,-	C2orf29,CREG2	-128388,5993
chr8:68881476-68882179	chr8	+	68881543	68882199	True	NM_024870,NM_020361	chr8,chr8	+,-	PREX2,CPA6	-16992,-222923
chr14:59292211-59293025	chr14	+	59292485	59292841	True	NM_012460,NM_016651	chr14,chr14	-,+	TIMM9,DACT1	-398253,-187779
chr15:49463572-49464706	chr15	+	49463618	49464572	True	NM_004236,NM_002044	chr15,chr15	-,+	COPS2,GALK2	-15764,-1248
chr20:3048806-3049566	chr20	+	3048864	3049584	True	NM_000490,NM_000915	chr20,chr20	-,+	AVP,OXT	15836,2681
chr17:48245848-48246634	chr17	+	48245908	48246490	True	NR_024192,NR_024193,NM_001135697,NM_000023	chr17,chr17,chr17,chr17	-,-,+,+	HILS1,HILS1,SGCA,SGCA	3397,3397,-2593,-2593
chr6:160769390-160769649	chr6	+	160769456	160769628	True	NM_003058,NM_021977	chr6,chr6	-,+	SLC22A2,SLC22A3	-89493,-82
chr22:19117605-19118046	chr22	+	19117644	19118078	True	NM_053006,NM_005137,NM_001173533,NM_001184781,NM_001173534,NR_033674	chr22,chr22,chr22,chr22,chr22,chr22	+,-,-,-,-,-	TSSK2,DGCR2,DGCR2,DGCR2,DGCR2,DGCR2	242,-7677,-7677,-7677,-7677,-7677
chr17:25958671-25959198	chr17	+	25958680	25958978	True	NM_000625,NM_009587,NM_002308,NR_024043	chr17,chr17,chr17,chr17	-,+,+,+	NOS2,LGALS9,LGALS9,LGALS9	168627,-557,-557,-557
chr14:24423197-24423527	chr14	+	24423327	24423512	True	NR_023924,NR_023922,NR_023923,NM_021004,NR_023921	chr14,chr14,chr14,chr14,chr14	-,-,-,+,-	C14orf167,C14orf167,C14orf167,DHRS4,C14orf167	-29,837,-29,-413,-29
chr19:10651923-10652267	chr19	+	10652188	10652262	True	NM_001166215,NM_032885	chr19,chr19	-,+	S1PR5,ATG4D	-23520,2384
chr7:150497063-150497360	chr7	+	150497121	150497369	True	NM_001101312,NM_001101311,NM_018487,NM_014020,NM_001101314	chr7,chr7,chr7,chr7,chr7	-,-,+,-,-	TMEM176B,TMEM176B,TMEM176A,TMEM176B,TMEM176B	302,302,484,1129,302
chr3:197300112-197300497	chr3	+	197300184	197300532	True	NM_203315,NM_001011537	chr3,chr3	-,+	BDH1,FYTTD1	10,175891
chr2:96701624-96703121	chr2	+	96701680	96703165	True	NM_207328,NR_003698	chr2,chr2	-,+	GPAT2,LOC729234	-953,-25432
chr2:96701624-96703121	chr2	-	96452911	96454396	False	NM_207328,NM_138800	chr2,chr2	-,+	GPAT2,TRIM43	246381,-195203
chr5:139942026-139943180	chr5	+	139942142	139943090	True	NM_133172,NM_133173,NM_133174,NM_001035235,NM_080670,NM_006051	chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,+,-	APBB3,APBB3,APBB3,SRA1,SLC35A4,APBB3	1149,1149,1149,-4464,1329,1149
chr2:241378373-241378627	chr2	+	241378396	241378640	True	NR_024014,NM_002081	chr2,chr2	-,+	PP14571,GPC1	17527,-3332
chr19:39320651-39321518	chr19	+	39320804	39321101	True	NM_001398,NM_001042507	chr19,chr19	-,+	ECH1,LGALS7B	1457,-41012
chr3:189390178-189390902	chr3	+	189390505	189390964	True	NM_003722,NM_018192	chr3,chr3	+,-	TP63,LEPREL1	-41346,448007
chr3:119431724-119432929	chr3	+	119431830	119432930	True	NM_033364,NM_005694	chr3,chr3	+,-	C3orf15,COX17	-10017,-35587
chr2:25265649-25266066	chr2	+	25265727	25266105	True	NM_016544,NM_014971	chr2,chr2	-,+	DNAJC27,EFR3B	-70764,-805
chr1:32860655-32861253	chr1	+	32860669	32861165	True	NM_052841,NM_001143890,NM_018045,NM_001143889,NM_001143888	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	TSSK3,BSDC1,BSDC1,BSDC1,BSDC1	-32858,-607,-607,-607,-607
chr14:103852300-103852631	chr14	+	103852322	103852660	True	NM_001128918,NM_001128919,NM_001823,NM_001128920,NM_001128921,NM_002376	chr14,chr14,chr14,chr14,chr14,chr14	+,+,-,+,+,+	MARK3,MARK3,CKB,MARK3,MARK3,MARK3	-680,-680,136560,-680,-680,-680
chr19:55790924-55791381	chr19	+	55790957	55791359	True	NM_032430,NM_012267,NM_001130106	chr19,chr19,chr19	+,-,-	BRSK1,HSPBP1,HSPBP1	4174,442,442
chr4:41749949-41750440	chr4	+	41750165	41750371	True	NM_001112720,NM_003924	chr4,chr4	+,-	LIMCH1,PHOX2B	-135298,666
chr15:91074181-91075935	chr15	+	91074506	91075900	True	NM_001042574,NR_028287,NM_022769	chr15,chr15,chr15	+,-,+	CRTC3,GABARAPL3,CRTC3	-1360,-181827,-1360
chr7:99650606-99651624	chr7	+	99650762	99651522	True	NM_145914,NM_017715	chr7,chr7	+,-	ZSCAN21,ZNF3	-3403,27906
chr8:6788268-6789405	chr8	+	6788519	6789349	True	NM_018361,NM_001926,NM_001925	chr8,chr8,chr8	+,-,-	AGPAT5,DEFA6,DEFA4	-222692,-4921,6487
chr17:26928456-26930200	chr17	+	26928795	26929438	True	NM_003170,NM_006461	chr17,chr17	+,-	SUPT6H,SPAG5	59863,-2739
chr6:160326794-160328163	chr6	+	160327256	160328082	True	NM_002377,NM_030752	chr6,chr6	+,-	MAS1,TCP1	-69,-116521
chr16:74399158-74399376	chr16	+	74399323	74399418	True	NR_026950,NM_002811	chr16,chr16	-,+	LOC283922,PSMD7	2788,-68701
chr16:74399158-74399376	chr16	-	70150881	70150976	False	NM_017990,NR_003610	chr16,chr16	+,-	PDPR,PDXDC2P	-3406,-51030
chr1:112299294-112299966	chr1	+	112299297	112300007	True	NM_198926,NM_007204	chr1,chr1	-,+	C1orf183,DDX20	-878,-1164
chr4:39368345-39370125	chr4	+	39368821	39370167	True	NM_002913,NM_001204747,NM_175737	chr4,chr4,chr4	-,-,+	RFC1,RFC1,KLB	-820,-820,38305
chr10:94596221-94597526	chr10	+	94596236	94597500	True	NM_004969,NM_001013848	chr10,chr10	-,+	IDE,EXOC6	-262384,-1824
chr17:44243800-44245649	chr17_ctg5_hap1	-	1349219	1350458	False	NR_002940,NM_016632	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LRRC37A4,ARL17A	130918,163476
chr17:44243800-44245649	chr17_ctg5_hap1	-	620672	621911	False	NM_001193466,NR_034172	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	KIAA1267,LOC644246	-24552,-25286
chr17:44243800-44245649	chr17	+	44243937	44245669	True	NM_001193466,NR_034172	chr17,chr17	-,+	KIAA1267,LOC644246	24548,25269
chr5:94405700-94406923	chr5	+	94405806	94406870	True	NM_152548,NM_001002796	chr5,chr5	+,-	FAM81B,MCTP1	320177,10725
chr3:57189101-57189306	chr3	+	57189109	57189338	True	NM_012096,NM_017563	chr3,chr3	+,-	APPL1,IL17RD	72426,10120
chr14:21854305-21854716	chr14	+	21854307	21854555	True	NM_014828,NR_003029,NM_007192	chr14,chr14,chr14	+,-,-	TOX4,SNORD9,SUPT16H	90779,5917,-1882
chr20:54824801-54826529	chr20	+	54824886	54826558	True	NM_003600,NM_019888	chr20,chr20	-,+	AURKA,MC3R	140844,-1157
chr9:36258286-36258496	chr9	+	36258340	36258544	True	NM_001190383,NM_007096,NM_001190384,NM_005476	chr9,chr9,chr9,chr9	-,+,-,-	GNE,CLTA,GNE,GNE	2,-67538,2,2
chr17:4334946-4335433	chr17	+	4335128	4335326	True	NM_003342,NM_182538	chr17,chr17	-,+	UBE2G1,SPNS3	-65159,1892
chr19:18285403-18285956	chr19	+	18285698	18286002	True	NM_002866,NM_006332	chr19,chr19	-,+	RAB3A,IFI30	28922,-1170
chrX:151618940-151619516	chrX	+	151619021	151619397	True	NM_000808,NM_018558	chrX,chrX	-,+	GABRA3,GABRQ	488,187239
chr3:152053774-152055329	chr3	+	152053798	152055137	True	NM_207297,NM_001123228	chr3,chr3	+,-	MBNL1,TMEM14E	-36667,3700
chr21:39643884-39644330	chr21	+	39643883	39644205	True	NM_005867,NM_170737	chr21,chr21	-,+	DSCR4,KCNJ15	-150429,223
chr8:55048502-55049144	chr8	+	55048544	55049108	True	NM_014175,NM_006330	chr8,chr8	+,-	MRPL15,LYPLA1	-826,-33967
chr1:33366154-33366474	chr1	+	33366159	33366433	True	NM_033504,NM_002143	chr1,chr1	-,+	TMEM54,HPCA	570,-14112
chrX:45060413-45060776	chrX	+	45060433	45060746	True	NM_024689,NM_176819,NM_021140	chrX,chrX,chrX	-,-,+	CXorf36,CXorf36,KDM6A	-287,-287,-328061
chr1:174968956-174969340	chr1	+	174968956	174969314	True	NM_014412,NM_022100,NM_001007214	chr1,chr1,chr1	+,-,+	CACYBP,MRPS14,CACYBP	-115,23327,-436
chr2:56098223-56099445	chr2	+	56098224	56099414	True	NM_001080433,NM_001039348	chr2,chr2	+,-	CCDC85A,EFEMP1	311843,51934
chr3:151586857-151588029	chr3	+	151586956	151587838	True	NM_033050,NR_027037	chr3,chr3	+,-	SUCNR1,LOC401093	3592,399628
chr11:5811210-5812351	chr11	+	5811332	5812400	True	NM_001005174,NM_001001913	chr11,chr11	+,-	OR52N2,OR52N1	29165,-1286
chrX:154299747-154299979	chrX	+	154299818	154299886	True	NM_001018024,NM_024332,NM_001018055,NM_001018025	chrX,chrX,chrX,chrX	-,+,+,-	MTCP1NB,BRCC3,BRCC3,MTCP1	-271,-159,-159,-271
chr1:222915441-222916793	chr1	+	222915440	222916845	True	NM_207468,NM_022831	chr1,chr1	+,-	FAM177B,AIDA	-4940,-29576
chr19:17413076-17413393	chr19	+	17413096	17413246	True	NM_024050,NM_024527,NM_023937	chr19,chr19,chr19	+,-,+	DDA1,ABHD8,MRPL34	7090,1086,3230
chr1:113031332-113032040	chr1	+	113031608	113031852	True	NR_036210,NM_024494	chr1,chr1	-,+	MIR4256,WNT2B	-27153,19517
chr12:62655972-62657971	chr12	+	62656075	62657250	True	NM_006313,NM_178539	chr12,chr12	+,-	USP15,FAM19A2	-1945,-69524
chr12:51159513-51161225	chr12	+	51159965	51160907	True	NM_005171,NM_001174130	chr12,chr12	+,-	ATF1,SLC11A2	-2227,242196
chr5:65446759-65447764	chr5	+	65447010	65447656	True	NR_028474,NM_001077199,NM_139168	chr5,chr5,chr5	-,+,+	LOC100303749,SREK1,SREK1	-205609,-6976,-6398
chr1:242014295-242016049	chr1	+	242014463	242015923	True	NM_006027,NM_001004343,NM_130398,NM_003686	chr1,chr1,chr1,chr1	+,-,+,+	EXO1,MAP1LC3C,EXO1,EXO1	-2490,146512,-3030,-2490
chr20:3691746-3692127	chr20	+	3691791	3692153	True	NM_001197327,NM_023068	chr20,chr20	+,-	HSPA12B,SIGLEC1	21163,-4016
chr2:187350103-187350658	chr2	+	187350103	187350698	True	NM_182521,NM_018471	chr2,chr2	-,+	ZSWIM2,ZC3H15	363249,186
chr2:111488116-111488965	chr2	+	111488258	111488980	True	NM_004336,NM_001142807	chr2,chr2	-,+	BUB1,ACOXL	-52574,1169
chr6:150919239-150920435	chr6	+	150919505	150920427	True	NM_001029884,NM_024518	chr6,chr6	+,-	PLEKHG1,ULBP3	571,-529303
chr9:112182531-112182861	chr9	+	112182530	112182882	True	NM_001145371,NM_001037293,NR_026918,NM_001145372	chr9,chr9,chr9,chr9	-,+,-,-	PTPN3,PALM2,PTPN3,PTPN3	8491,220185,-2467,8491
chr21:46293121-46293403	chr21	+	46293127	46293283	True	NM_058190,NM_004339	chr21,chr21	+,-	C21orf70,PTTG1IP	66671,585
chr6:160227018-160228015	chr6	+	160227022	160227917	True	NM_173516,NM_030752	chr6,chr6	+,-	PNLDC1,TCP1	-5772,-16287
chr12:83079979-83080265	chr12	+	83080039	83080259	True	NM_152588,NR_033192	chr12,chr12	+,-	TMTC2,CCDC59	674,-327455
chr1:1113659-1114170	chr1	+	1113991	1114085	True	NM_004195,NM_153254,NM_001130045,NR_029957	chr1,chr1,chr1,chr1	-,+,+,+	TNFRSF18,TTLL10,TTLL10,MIR429	28054,991,-4756,-9657
chr9:132516451-132517117	chr9	+	132516745	132516815	True	NM_014506,NM_004878	chr9,chr9	+,-	TOR1B,PTGES	48616,-1401
chr15:22706318-22707083	chr15	+	22706498	22706880	True	NR_027407,NM_001001413	chr15,chr15	-,+	GOLGA8DP,GOLGA6L1	8898,29365
chr15:22706318-22707083	chr15	-	28632632	28633020	False	NM_004667,NR_033351,NR_033353	chr15,chr15,chr15	-,+,+	HERC2,GOLGA8F,GOLGA8G	-65337,-8899,-8899
chr15:22706318-22707083	chr15	+	28768907	28769295	False	NR_036443,NR_033351,NR_033353	chr15,chr15,chr15	+,-,-	HERC2P9,GOLGA8F,GOLGA8G	130292,8898,8898
chr15:22706318-22707083	chr15	-	20776499	20776551	False	NM_001145004,NR_027411	chr15,chr15	-,+	GOLGA6L6,GOLGA8C	-29385,-8876
chr15:22706318-22707083	chr15	-	23443897	23443949	False	NR_002824,NR_033350	chr15,chr15	-,+	HERC2P2,GOLGA8E	-65638,-8878
chr15:22706318-22707083	chr15	-	23609039	23609097	False	NR_002824,NR_033350	chr15,chr15	-,+	HERC2P2,GOLGA8E	-230780,-174020
chr12:10830161-10831371	chr12	+	10830380	10831420	True	NM_005042,NM_018423	chr12,chr12	+,-	PRH2,STYK1	250413,-3489
chr4:52904879-52905115	chr4	+	52904941	52905161	True	NM_145263,NM_000232	chr4,chr4	+,-	SPATA18,SGCB	12431,-456
chr8:145517278-145517908	chr8	+	145517487	145517805	True	NM_005526,NM_015201	chr8,chr8	+,-	HSF1,BOP1	-2269,-2367
chr8:29951868-29952732	chr8	+	29952155	29952663	True	NM_001128208,NM_016127,NM_015344	chr8,chr8,chr8	+,-,+	LEPROTL1,TMEM66,LEPROTL1	258,-11506,258
chr19:58966454-58966686	chr19	+	58966521	58966673	True	NM_207395,NM_003433	chr19,chr19	+,-	ZNF324B,ZNF132	-3601,-14932
chr19:49195988-49196961	chr19	+	49196389	49196973	True	NM_145807,NM_001097638,NM_000511	chr19,chr19,chr19	-,+,+	NTN5,FUT2,FUT2	-20125,2254,2254
chr6:10748047-10749416	chr6	+	10748321	10749377	True	NM_030969,NR_026736,NM_001127711	chr6,chr6,chr6	+,-,+	TMEM14B,C6orf52,TMEM14B	-377,-53291,-377
chr21:46349128-46350020	chr21	+	46349321	46350051	True	NM_058190,NR_027129,NR_027128,NM_000211,NM_001127491	chr21,chr21,chr21,chr21,chr21	+,-,-,-,-	C21orf70,C21orf67,C21orf67,ITGB2,ITGB2	9903,9827,9827,-8356,-568
chr10:76997767-76998005	chr10	+	76997767	76997975	True	NM_144589,NR_033675	chr10,chr10	-,+	COMTD1,VDAC2	-1997,-27518
chr15:42297691-42298155	chr15	+	42297698	42298166	True	NM_001080490,NM_001114633	chr15,chr15	-,+	PLA2G4E,PLA2G4B	4329,-166738
chr1:40149463-40149737	chr1	+	40149624	40149776	True	NM_203456,NM_016257	chr1,chr1	+,-	PPIE,HPCAL4	54740,7363
chr12:121646251-121647203	chr12	+	121646276	121647202	True	NM_002560,NM_172226	chr12,chr12	+,-	P2RX4,CAMKK2	461,87404
chrX:135862959-135863686	chrX	+	135863002	135863720	True	NM_004840,NM_000074	chrX,chrX	-,+	ARHGEF6,CD40LG	5,-132724
chr6:49577769-49579545	chr6	+	49578023	49579234	True	NM_001145652,NM_000324	chr6,chr6	+,-	C6orf141,RHAG	-59974,25403
chr6:107810086-107810350	chr6	+	107810091	107810331	True	NM_018013,NM_020381	chr6,chr6	+,-	SOBP,PDSS2	985,-29312
chr3:138482272-138483888	chr3	+	138482278	138483785	True	NM_018147,NM_006219	chr3,chr3	+,-	FAIM,PIK3CB	-154419,-4093
chr11:78273448-78274354	chr11	+	78273492	78274135	True	NM_024678,NM_020798	chr11,chr11	-,+	NARS2,USP35	11832,-373686
chr19:55214397-55214833	chr19	+	55214531	55214831	True	NR_003061,NM_145057	chr19,chr19	+,-	LILRP2,CDC42EP5	4769,-230109
chr6:57042181-57042731	chr6	+	57042430	57042768	True	NM_183227,NM_004282	chr6,chr6	-,+	RAB23,BAG2	43539,-5389
chr18:72345978-72347371	chr18	+	72346113	72347361	True	NM_017757,NR_024484,NM_001146190,NM_001146189	chr18,chr18,chr18,chr18	+,-,+,+	ZNF407,LOC400657,ZNF407,ZNF407	-3245,-81042,-3245,-3245
chr7:142724595-142726162	chr7	+	142724594	142726141	True	NM_001001667,NM_001001658	chr7,chr7	+,-	OR6V1,OR9A2	23296,-375
chr16:70718393-70719234	chr16	+	70718489	70719065	True	NM_001172772,NM_138383	chr16,chr16	+,-	IL34,MTSS1L	-60645,939
chr7:143956484-143956920	chr7	+	143956490	143956848	True	NR_002158,NM_198495,NM_001005328,NR_002157	chr7,chr7,chr7,chr7	-,-,-,-	OR2A20P,CTAGE4,OR2A7,OR2A9P	-7794,9594,5,-7942
chr7:143956484-143956920	chr6	+	132022310	132022668	False	NM_030908,NM_005021,NM_001145659	chr6,chr6,chr6	-,+,-	OR2A4,ENPP3,CTAGE9	5,-63919,9539
chr11:105936026-105937043	chr11	+	105936036	105936997	True	NM_015423,NM_152433	chr11,chr11	+,-	AASDHPPT,KBTBD3	11294,11525
chr3:102157376-102158840	chr3	+	102157383	102158867	True	NM_000986,NM_175056	chr3,chr3	-,+	RPL24,ZPLD1	-751820,-3575
chr4:1976359-1977078	chr4	+	1976457	1977069	True	NR_030641,NR_003004	chr4,chr4	-,+	MIR943,SCARNA22	11185,-147
chr17:7909981-7910385	chr17	+	7909995	7910385	True	NM_000180,NR_030697	chr17,chr17	+,-	GUCY2D,TRAPPC1	-4058,-74678
chr8:37281815-37282826	chr8	+	37281946	37282668	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	270632,322958
chr17:32909776-32910557	chr17	+	32909851	32910377	True	NM_207454,NM_207313	chr17,chr17	-,+	C17orf102,TMEM132E	-3463,-2134
chr4:15443567-15443824	chr4	+	15443664	15443838	True	NM_001193534,NM_031911	chr4,chr4	-,+	FBXL5,C1QTNF7	213247,-14093
chr22:25093335-25093834	chr22	+	25093410	25093706	True	NR_024593,NR_024494	chr22,chr22	-,+	POM121L10P,BCRP3	-38296,-64579
chr12:50345763-50347402	chr12	+	50345784	50347420	True	NM_000486,NM_001651,NR_026948	chr12,chr12,chr12	+,+,-	AQP2,AQP5,LOC283332	-1311,7858,-40138
chr9:114358004-114358750	chr9	+	114358207	114358602	True	NM_001015882,NM_012212,NM_001146109,NM_001146108	chr9,chr9,chr9,chr9	+,-,-,-	DNAJC25,PTGR1,PTGR1,PTGR1	35029,3160,3584,3584
chr20:39971574-39971901	chr20	+	39971579	39971877	True	NM_052846,NM_022896	chr20,chr20	-,+	EMILIN3,LPIN3	23671,-2070
chr6:47251803-47253223	chr6	+	47251852	47253249	True	NM_012120,NM_014452	chr6,chr6	+,-	CD2AP,TNFRSF21	192275,24487
chr19:54414136-54414478	chr19	+	54414191	54414269	True	NM_144687,NM_031896	chr19,chr19	-,+	NLRP12,CACNG7	-86543,1721
chr10:12393591-12394462	chr10	+	12393875	12394253	True	NM_014142,NM_153498,NM_020397	chr10,chr10,chr10	-,+,+	NUDT5,CAMK1D,CAMK1D	-155732,-2343,-2343
chrX:30254094-30256075	chrX	+	30254182	30255870	True	NM_000475,NM_002363,NM_002365,NM_002367,NM_177415,NM_177404	chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,+	NR0B1,MAGEB1,MAGEB3,MAGEB4,MAGEB1,MAGEB1	71675,5977,-5680,4186,5977,9400
chr3:47421965-47422251	chr3	+	47421969	47422203	True	NM_012235,NM_015466	chr3,chr3	-,+	SCAP,PTPN23	95292,287
chr12:113777126-113777365	chr12	+	113777291	113777367	True	NM_001159727,NM_024959	chr12,chr12	+,-	PLBD2,SLC24A6	19003,-4366
chr6:27288932-27290600	chr6	+	27289413	27290354	True	NM_033482,NM_032030	chr6,chr6	-,+	POM121L2,FKSG83	-9402,2223
chr21:45999153-45999692	chr21	+	45999229	45999307	True	NM_198694,NM_198687	chr21,chr21	-,+	KRTAP10-5,KRTAP10-4	1224,-5681
chr9:115145511-115146979	chr9	+	115145808	115146975	True	NM_032303,NR_036085,NM_001195822,NR_036651	chr9,chr9,chr9,chr9	+,-,+,+	HSDL2,MIR3134,HSDL2,HSDL2	-3677,-33263,-3677,-3677
chr7:16837402-16838092	chr7	+	16837402	16838140	True	NM_006408,NM_014399	chr7,chr7	-,+	AGR2,TSPAN13	6648,-44103
chr17:79896121-79896809	chr17	+	79896120	79896855	True	NR_015454,NM_001145113,NM_153824,NM_006907	chr17,chr17,chr17,chr17	+,-,-,-	LOC92659,MYADML2,PYCR1,PYCR1	-10466,8304,-1152,-1152
chr4:184578432-184579205	chr4	+	184578464	184579220	True	NM_199053,NM_152682,NM_021942	chr4,chr4,chr4	+,-,+	C4orf41,RWDD4,C4orf41	1225,1169,1225
chr10:32613158-32613641	chr10	+	32613157	32613594	True	NM_025209,NM_001026383	chr10,chr10	-,+	EPC1,CCDC7	22571,121446
chr1:109506459-109507486	chr1	+	109506679	109507327	True	NM_013296,NM_015127,NM_001048210	chr1,chr1,chr1	+,-,-	GPSM2,CLCC1,CLCC1	-87127,-568,-568
chr16:25012984-25013256	chr16	+	25013020	25013133	True	NM_001006634,NM_001032391	chr16,chr16	-,+	ARHGAP17,LCMT1	13603,109913
chr2:132123535-132124177	chr2	+	132123625	132123891	True	NM_001077637,NR_036499	chr2,chr2	-,+	LOC150786,LOC389043	-1894,36582
chr2:132123535-132124177	chr2	-	130735286	130735398	False	NR_036537,NM_032144	chr2,chr2	-,+	LOC100131320,RAB6C	2697,1836
chr6:166480436-166482281	chr6	+	166480551	166482320	True	NR_026860,NR_027284	chr6,chr6	-,+	C6orf176,LOC441177	-79024,-79563
chr13:93879325-93879668	chr13	+	93879339	93879556	True	NM_001129889,NM_005708	chr13,chr13	-,+	DCT,GPC6	1252430,-312
chr11:6630630-6632282	chr11	+	6630814	6632182	True	NM_001014794,NM_001014795,NM_015324,NM_004517,NM_000391,NM_006284	chr11,chr11,chr11,chr11,chr11,chr11	+,+,-,+,-,-	ILK,ILK,RRP8,ILK,TPP1,TAF10	-5901,-5658,-6003,-5901,8560,1313
chr17:32689739-32690125	chr17	+	32689742	32690156	True	NM_005408,NM_002981	chr17,chr17	+,-	CCL13,CCL1	-6322,146
chr2:205408271-205409410	chr2	+	205408327	205409456	True	NM_057177,NM_203365,NM_152526,NM_205863	chr2,chr2,chr2,chr2	+,-,+,+	PARD3B,RAPH1,PARD3B,PARD3B	1059,-1008269,1059,1059
chr10:118379232-118379776	chr10	+	118379401	118379559	True	NM_005396,NM_144661	chr10,chr10	+,-	PNLIPRP2,C10orf82	905,49972
chrX:152483258-152484469	chrX	+	152483657	152484412	True	NM_001080485,NM_004988	chrX,chrX	+,-	ZNF275,MAGEA1	115200,1754
chr1:36553173-36553606	chr1	+	36553215	36553603	True	NM_017825,NM_005202,NM_014466	chr1,chr1,chr1	+,-,+	ADPRHL2,COL8A2,TEKT2	849,12297,-3590
chr3:195345110-195345569	chr3	+	195345121	195345593	True	NM_001647,NR_003265	chr3,chr3	-,+	APOD,SDHAP2	-34045,39316
chr3:195345110-195345569	chr3	+	195451173	195451645	False	NM_001098516,NM_004532,NM_152673	chr3,chr3,chr3	+,-,+	MUC20,MUC4,MUC20	-126,87553,-3471
chr20:170639-171407	chr20	+	170638	171298	True	NM_139074,NM_001037732	chr20,chr20	+,-	DEFB127,DEFB128	-32509,-374
chr3:126115188-126116873	chr3	+	126115365	126116462	True	NM_182628,NM_014079	chr3,chr3	+,-	CCDC37,KLF15	-1634,-39129
chr1:19808078-19809349	chr1	+	19808164	19809374	True	NM_001032363,NM_004930	chr1,chr1	+,-	C1orf151,CAPZB	114096,2742
chr21:34087176-34087502	chr21	+	34087204	34087451	True	NR_024622,NM_001160302	chr21,chr21	+,-	C21orf49,SYNJ1	56959,12858
chr1:32169788-32170626	chr1	+	32169827	32170603	True	NM_001856,NM_001525	chr1,chr1	-,+	COL16A1,HCRTR1	-59,-86577
chr4:147442747-147443031	chr4	+	147442782	147443023	True	NM_001029998,NM_032128,NM_004575	chr4,chr4,chr4	-,-,+	SLC10A7,SLC10A7,POU4F2	150,150,117021
chr7:23720604-23720808	chr7	+	23720707	23720845	True	NM_199136,NR_002711,NM_001127364,NM_001127365	chr7,chr7,chr7,chr7	+,-,+,+	C7orf46,CLK2P,C7orf46,C7orf46	-1009,-94561,-1009,-1009
chr8:21999958-22000316	chr8	+	22000032	22000272	True	NM_001172357,NM_025232	chr8,chr8	+,-	SFTPC,REEP4	18911,-584
chr15:45123778-45125496	chr15	+	45123970	45124898	True	NM_182985,NM_001145112	chr15,chr15	+,-	TRIM69,PATL2	-95461,-154884
chr6:74070964-74072165	chr6	+	74070965	74072051	True	NM_001080507,NM_001025290,NM_001017361	chr6,chr6,chr6	-,-,+	OOEP,DPPA5,C6orf221	7514,-6966,348
chr7:150676603-150676804	chr7	+	150676743	150676819	True	NM_000238,NM_172056,NM_000603	chr7,chr7,chr7	-,-,+	KCNH2,KCNH2,NOS3	-1341,-1341,11324
chr19:36055148-36055557	chr19	+	36055352	36055558	True	NM_000704,NM_032635	chr19,chr19	-,+	ATP4A,TMEM147	-792,-18858
chr10:79395263-79395519	chr10	+	79395315	79395505	True	NR_024585,NM_001014797,NM_001161353,NM_001161352,NM_002247	chr10,chr10,chr10,chr10,chr10	+,-,-,-,-	LOC100128292,KCNMA1,KCNMA1,KCNMA1,KCNMA1	291064,2122,2122,2122,2122
chrX:47441173-47441544	chrX	+	47441179	47441499	True	NM_006950,NM_003254	chrX,chrX	-,+	SYN1,TIMP1	37807,190
chr2:233470014-233470345	chr2	+	233470200	233470343	True	NM_145702,NR_027663	chr2,chr2	-,+	TIGD1,EFHD1	-54974,423
chr10:106114032-106115140	chr10	+	106114064	106115186	True	NM_001008723,NM_033397	chr10,chr10	+,-	CCDC147,ITPRIP	-593,-20401
chr7:141833353-141833930	chr7	+	141833361	141833867	True	NR_024346,NR_003715	chr7,chr7	-,+	MOXD2P,LOC93432	113069,-21877
chr17:75369794-75370039	chr17	+	75369866	75370002	True	NM_001113494,NM_001113493,NR_036200	chr17,chr17,chr17	+,+,-	SEPT9,SEPT9,MIR4316	2162,-645,23184
chr2:110654963-110655990	chr2	+	110655259	110655947	True	NR_036225,NR_038099,NR_027467,NM_001205288,NR_027145,NM_033514	chr2,chr2,chr2,chr2,chr2,chr2	-,+,+,+,+,+	MIR4267,LOC100288695,LIMS3,LOC100288695,LIMS3-LOC440895,LIMS3	171722,61,61,61,61,61
chr2:110654963-110655990	chr2	-	111230713	111231401	False	NR_037626,NR_038099,NR_027467,NM_001205288,NR_027145,NM_033514	chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-	LOC100507334,LOC100288695,LIMS3,LOC100288695,LIMS3-LOC440895,LIMS3	-227549,-61,-61,-61,-61,-61
chr2:110654963-110655990	chr2	+	109270637	109271172	False	NM_001193485,NM_022336	chr2,chr2	+,-	LIMS1,EDAR	94,334706
chr7:56186318-56187445	chr7	+	56186368	56187249	True	NM_015411,NM_001145712	chr7,chr7	+,-	SUMF2,LOC389493	-54509,-2278
chr13:29232755-29233039	chr13	+	29232772	29233057	True	NM_001135919,NM_015932	chr13,chr13	-,+	SLC46A3,POMP	60144,83
chr19:593110-593694	chr19	+	593130	593302	True	NM_001194,NM_005035	chr19,chr19	+,-	HCN2,POLRMT	-3288,40316
chr10:88829163-88829930	chr10	+	88829455	88829935	True	NM_005271,NM_019054	chr10,chr10	-,+	GLUD1,FAM35A	24893,25017
chr3:169900600-169900843	chr3	+	169900639	169900895	True	NM_002740,NM_024947	chr3,chr3	+,-	PRKCI,PHC3	39324,-1102
chr15:74658507-74658783	chr15	+	74658531	74658605	True	NM_001099773,NM_182791,NM_000781	chr15,chr15,chr15	-,+,-	CYP11A1,CCDC33,CYP11A1	-2,-47682,1526
chr22:17643714-17644686	chr22	+	17643854	17644714	True	NM_033070,NM_017829,NR_024482,NR_024483	chr22,chr22,chr22,chr22	-,-,+,+	CECR5,CECR5,CECR4,CECR4	-3685,1513,-3638,-3638
chr1:1260615-1260972	chr1	+	1260713	1260957	True	NM_001029885,NM_152228,NM_017871	chr1,chr1,chr1	+,+,-	GLTPD1,TAS1R3,CPSF3L	-621,5768,-667
chr19:8578137-8578474	chr19	+	8578229	8578523	True	NM_001146175,NM_032370,NM_031203	chr19,chr19,chr19	-,-,+	ZNF414,ZNF414,HNRNPM	575,575,-68477
chr16:84331805-84332299	chr16	+	84332014	84332236	True	NM_021197,NM_172347	chr16,chr16	+,-	WFDC1,KCNG4	-3672,-58658
chr20:43280705-43281061	chr20	+	43280708	43281115	True	NM_003881,NM_000022	chr20,chr20	+,-	WISP2,ADA	62769,-332
chr19:52074517-52075795	chr19	+	52074551	52075663	True	NM_007147,NR_034159	chr19,chr19	+,-	ZNF175,FLJ30403	-71,22020
chr8:92047777-92048207	chr8	+	92047777	92047979	True	NM_016023,NM_018710	chr8,chr8	+,-	OTUD6B,TMEM55A	34444,5274
chr9:82185995-82186401	chr9	+	82186003	82186443	True	NM_002072,NM_007005	chr9,chr9	-,+	GNAQ,TLE4	-1539784,434
chr17:41737511-41738574	chr17	+	41737513	41738447	True	NM_001136483,NM_013999,NM_001040002,NM_004527	chr17,chr17,chr17,chr17	+,-,-,-	C17orf105,MEOX1,MEOX1,MEOX1	119355,534,865,534
chr3:130744006-130745324	chr3	+	130744005	130745223	True	NM_145910,NM_014065,NM_001146003,NM_024800	chr3,chr3,chr3,chr3	+,-,+,+	NEK11,ASTE1,NEK11,NEK11	470,473,470,470
chr5:140050227-140050997	chr5	+	140050228	140050896	True	NM_017706,NM_194249	chr5,chr5	+,-	WDR55,DND1	-5902,2325
chr10:13630459-13631271	chr10	+	13630672	13631296	True	NM_003675,NM_001100912	chr10,chr10	+,-	PRPF18,BEND7	-1784,-85696
chr7:12447694-12449105	chr7	+	12448121	12449143	True	NM_001112706,NM_001135924	chr7,chr7	+,-	SCIN,VWDE	161059,-4269
chr8:144654957-144655445	chr8	+	144655097	144655439	True	NM_145201,NM_024736,NM_001100878	chr8,chr8,chr8	-,+,-	NAPRT1,GSDMD,C8orf73	5124,-14671,-169
chr20:5484085-5484844	chr20	+	5484194	5484864	True	NR_029405,NR_015406	chr20,chr20	+,-	LOC643406,LOC149837	-32404,428
chr20:5484085-5484844	chr20	-	5452703	5452901	False	NR_029405,NR_015406	chr20,chr20	+,-	LOC643406,LOC149837	-912,32392
chr11:747329-747596	chr11	+	747468	747588	True	NM_006755,NM_182612	chr11,chr11	+,-	TALDO1,PDDC1	-87,29949
chr2:265235-265744	chr2	+	265265	265764	True	NM_007099,NM_001040649,NM_004300,NR_024080,NM_001159597,NM_015677	chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,-,-	ACP1,ACP1,ACP1,ACP1,SH3YL1,SH3YL1	-447,-447,-447,-447,-1197,-1197
chr14:45551570-45553418	chr14	+	45551810	45553436	True	NM_017922,NM_002013	chr14,chr14	+,-	PRPF39,FKBP3	-135,50346
chr22:39150058-39151235	chr22	+	39150157	39151070	True	NM_015374,NM_001199580,NM_004286,NM_001199579	chr22,chr22,chr22,chr22	-,-,+,-	SUN2,SUN2,GTPBP1,SUN2	1004,447,-48402,1004
chr11:65266460-65268369	chr11	+	65266474	65268266	True	NR_002819,NM_001130144	chr11,chr11	+,-	MALAT1,LTBP3	-1292,57483
chr3:196595772-196596233	chr3	+	196595776	196596036	True	NM_152699,NM_001042540	chr3,chr3	+,-	SENP5,NCBP2	-1100,73478
chr20:3777682-3778152	chr20	+	3777804	3778184	True	NM_021873,NM_021872,NM_001810,NM_004358	chr20,chr20,chr20,chr20	+,+,-,+	CDC25B,CDC25B,CENPB,CDC25B	-1458,-1458,-10467,-1458
chr6:167524294-167525324	chr6	+	167524363	167525276	True	NM_005299,NM_004367	chr6,chr6	-,+	GPR31,CCR6	46093,18
chr4:7939507-7940085	chr4	+	7939507	7940083	True	NM_001134647,NR_026892,NM_198595	chr4,chr4,chr4	-,+,-	AFAP1,AFAP1-AS1,AFAP1	1620,-183741,1620
chr19:16008515-16010460	chr19	+	16009054	16009952	True	NM_001004465,NM_001082	chr19,chr19	+,-	OR10H4,CYP4F2	49865,-170
chr4:113606081-113606638	chr4	+	113606285	113606545	True	NM_015454,NR_029857	chr4,chr4	+,-	LARP7,MIR302B	-47724,-36572
chr3:57323250-57323834	chr3	+	57323250	57323539	True	NM_012096,NM_001142733	chr3,chr3	+,-	APPL1,ASB14	-61546,3234
chr12:7033799-7035092	chr12	+	7033981	7034953	True	NM_001940,NM_001007026,NR_003010	chr12,chr12,chr12	+,+,-	ATN1,ATN1,SCARNA12	2526,-407,41866
chr19:49402883-49403324	chr19	+	49403186	49403248	True	NM_003323,NM_006184	chr19,chr19	-,+	TULP2,NUCB1	-1190,58
chr2:183659471-183659686	chr2	+	183659559	183659705	True	NM_018981,NM_001463	chr2,chr2	+,-	DNAJC10,FRZB	-78619,71843
chr3:39232127-39233425	chr3	+	39232182	39233308	True	NM_145755,NM_001198621,NM_194293	chr3,chr3,chr3	+,-,-	TTC21A,XIRP1,XIRP1	-83081,827,819
chr17:71228419-71228740	chr17	+	71228440	71228768	True	NM_032837,NM_001100621,NM_001100622,NM_001098832,NM_017941	chr17,chr17,chr17,chr17,chr17	-,+,+,-,+	FAM104A,C17orf80,C17orf80,FAM104A,C17orf80	-59,7,7,-59,7
chr7:94286791-94287420	chr7	+	94286799	94287215	True	NM_003919,NM_001099400,NM_001184962,NM_001184961,NM_001172438,NM_001099401,NM_015068,NM_001172437,NM_001040152	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,+,+,+,-,+,+,+	SGCE,SGCE,PEG10,PEG10,PEG10,SGCE,PEG10,PEG10,PEG10	-1278,-1278,-1214,-1214,-1169,-1278,-1214,-1169,-1214
chr1:24118739-24119301	chr1	+	24118885	24119061	True	NM_001008216,NM_000403,NM_001127621,NM_007260	chr1,chr1,chr1,chr1	-,-,-,+	GALE,GALE,GALE,LYPLA2	8283,8023,7049,-1290
chr3:179173107-179173313	chr3	+	179173134	179173316	True	NM_004301,NM_021629	chr3,chr3	+,-	ACTL6A,GNB4	107391,-3763
chr5:159655504-159656574	chr5	+	159655508	159656614	True	NM_001445,NM_024565	chr5,chr5	+,-	FABP6,CCNJL	-178,83009
chr16:21833064-21834394	chr16	+	21833903	21834143	True	NM_170664,NR_003370	chr16,chr16	+,-	OTOA,RRN3P1	-117678,-3408
chr16:21833064-21834394	chr16	-	29084816	29084894	False	NM_024816,NR_003369	chr16,chr16	-,+	RABEP2,RRN3P2	-148284,1268
chr16:21833064-21834394	chr16	+	15190304	15190382	False	NM_018427,NM_015027	chr16,chr16	-,+	RRN3,PDXDC1	-2146,-121529
chr19:6736981-6737278	chr19	+	6736988	6737078	True	NM_004240,NM_001080452	chr19,chr19	+,-	TRIP10,GPR108	2628,607
chr6:114387719-114388884	chr6	+	114388058	114388922	True	NR_027060,NM_153612	chr6,chr6	+,-	FLJ34503,HS3ST5	-162566,-4017
chr19:9236446-9237562	chr19	+	9236680	9237296	True	NM_001190791,NM_001001958	chr19,chr19	+,-	ZNF317,OR7G3	13759,381
chr11:79151809-79152100	chr11	+	79152048	79152114	True	NM_001098816,NM_020798	chr11,chr11	-,+	ODZ4,USP35	-353,-1252241
chrX:34959082-34959479	chrX	+	34959279	34959419	True	NM_152631,NM_031442	chrX,chrX	+,-	FAM47B,TMEM47	1493,-283874
chr3:185303485-185303764	chr3	+	185303574	185303723	True	NM_021627,NM_139248	chr3,chr3	+,-	SENP2,LIPH	307,-33205
chr15:81284491-81285739	chr15	+	81284606	81285397	True	NM_022566,NM_015154	chr15,chr15	+,-	MESDC1,MESDC2	7897,-2401
chr8:145582977-145583394	chr8	+	145582995	145583271	True	NM_024531,NM_012162,NR_015428,NM_024555	chr8,chr8,chr8,chr8	+,-,-,-	GPR172A,FBXL6,C8ORFK29,FBXL6	-821,-863,-4490,-863
chrX:103027228-103027824	chrX	+	103027233	103027856	True	NM_000533,NM_001172285,NM_001128834,NM_199478	chrX,chrX,chrX,chrX	+,-,+,+	PLP1,GLRA4,PLP1,PLP1	3897,-43681,3582,3897
chr12:113585274-113586374	chr12	+	113585348	113586021	True	NM_004658,NM_001144872	chr12,chr12	-,+	RASAL1,CCDC42B	-11304,1641
chr18:26229415-26230133	chr18	+	26229475	26230100	True	NR_031684,NM_001792	chr18,chr18	+,-	MIR302F,CDH2	1648775,-472030
chr1:183165515-183166665	chr1	+	183165732	183166468	True	NM_170706,NM_005562	chr1,chr1	-,+	NMNAT2,LAMC2	107593,-10610
chr5:175303682-175304050	chr5	+	175303684	175304100	True	NM_032361,NM_001008220	chr5,chr5	-,+	THOC3,CPLX2	91497,-5234
chr7:105162765-105163163	chr7	+	105162865	105163177	True	NM_021930,NM_019042	chr7,chr7	+,-	RINT1,PUS7	9354,-180
chr7:134848319-134849174	chr7	+	134848501	134849031	True	NM_018295,NR_024186,NR_024185,NM_024033	chr7,chr7,chr7,chr7	+,-,-,-	TMEM140,C7orf49,C7orf49,C7orf49	-15786,6551,6551,6551
chr1:11713900-11714278	chr1	+	11714163	11714279	True	NM_001014765,NM_018438,NM_012168,NM_033182,NM_183412,NM_183413	chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,+,+,+	FBXO44,FBXO6,FBXO2,FBXO44,FBXO44,FBXO44	634,9870,659,634,152,634
chr6:31369029-31370435	chr6_qbl_hap6	+	2662677	2663717	False	NM_001177519,NM_000247,NR_036523,NR_036524,NM_005514	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	+,+,+,+,-	MICA,MICA,MICA,MICA,HLA-B	1099,1099,-1721,-809,-44172
chr6:31369029-31370435	chr6	+	31369231	31370271	True	NM_001177519,NM_000247,NR_036523,NR_036524,NM_005514	chr6,chr6,chr6,chr6,chr6	+,+,+,+,-	MICA,MICA,MICA,MICA,HLA-B	1099,1099,-1721,-809,-44242
chr6:31369029-31370435	chr6_mann_hap4	+	2715667	2716705	False	NM_001177519,NM_000247,NR_036523,NR_036524,NM_005514	chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4	+,+,+,+,-	MICA,MICA,MICA,MICA,HLA-B	1099,1099,-1721,-809,-44223
chr6:31369029-31370435	chr6_ssto_hap7	+	2703029	2704068	False	NM_001177519,NM_000247,NR_036523,NR_036524,NM_005514	chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7	+,+,+,+,-	MICA,MICA,MICA,MICA,HLA-B	1099,1099,-1721,-809,-44281
chr6:31369029-31370435	chr6_cox_hap2	+	2881927	2882970	False	NM_001177519,NM_000247,NR_036523,NR_036524,NM_005514	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,+,+,+,-	MICA,MICA,MICA,MICA,HLA-B	1099,1099,-1721,-809,-44250
chr19:14052935-14054432	chr19	+	14052967	14053335	True	NM_138353,NM_024825	chr19,chr19	+,-	DCAF15,PODNL1	9983,-3678
chr1:33364730-33365971	chr1	+	33364827	33365777	True	NM_033504,NM_002143	chr1,chr1	-,+	TMEM54,HPCA	1226,-12780
chr22:25712603-25714069	chr22	+	25713006	25713771	True	NR_029395,NM_182492	chr22,chr22	+,-	IGLL3P,LRP5L	452,44804
chr22:25712603-25714069	chr22	-	23983066	23983117	False	NM_153615,NM_016449	chr22,chr22	+,-	RGL4,C22orf43	49930,-8558
chr20:17511192-17511547	chr20	+	17511245	17511489	True	NM_001011546,NM_001195	chr20,chr20	+,-	DSTN,BFSP1	39109,574
chr15:81614776-81616287	chr15	+	81614854	81616182	True	NM_181900,NM_004513	chr15,chr15	-,+	STARD5,IL16	399,-25651
chr11:67779329-67779742	chr11	+	67779344	67779646	True	NM_001161473,NM_030930,NM_000694,NM_001030010	chr11,chr11,chr11,chr11	+,-,+,+	ALDH3B1,UNC93B1,ALDH3B1,ALDH3B1	-3347,-7751,-1605,-1605
chr8:92040902-92041442	chr8	+	92040939	92041101	True	NM_016023,NM_018710	chr8,chr8	+,-	OTUD6B,TMEM55A	41322,12152
chr9:21189642-21191460	chr9	+	21189974	21191501	True	NM_002170,NM_021068	chr9,chr9	+,-	IFNA8,IFNA4	217644,-2376
chr9:21189642-21191460	chr9	+	21209864	21209915	False	NM_002171,NM_002170,NM_002173,NM_021057	chr9,chr9,chr9,chr9	-,+,-,-	IFNA10,IFNA8,IFNA16,IFNA7	-2722,199230,7446,-7660
chr20:19740228-19740848	chr20	+	19740510	19740816	True	NM_016652,NM_018993	chr20,chr20	-,+	CRNKL1,RIN2	295924,129393
chr2:111879155-111879464	chr2	+	111879162	111879420	True	NM_138624,NR_015395,NM_138623,NM_001204106,NM_207003,NM_006538,NM_207002,NM_001204107,NM_001204113,NM_001204112,NM_001204111,NM_001204110,NM_138627,NM_138626,NM_138625,NM_138622,NM_001204108,NM_001204109,NM_138621	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,-,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+	BCL2L11,LOC541471,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11	-722,373322,-722,-722,-722,-722,-722,-722,-722,-722,-722,-722,-722,-722,-722,-722,-722,-722,-722
chr2:232571853-232572100	chr2	+	232571896	232572086	True	NM_001099285,NR_036052,NR_036263,NR_036262,NM_002823,NM_002601	chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,+,-	PTMA,MIR1244-1,MIR1244-3,MIR1244-2,PTMA,PDE6D	1148,5937,5937,5937,1148,73938
chr6:167619389-167620674	chr6	+	167619571	167620605	True	NM_005299,NM_001145121	chr6,chr6	-,+	GPR31,TCP10L2	-48252,-35541
chr6:167619389-167620674	chr6	-	167731541	167731591	False	NM_004610,NM_031949	chr6,chr6	-,+	TCP10,TTLL2	66457,6982
chr6:164758314-164758635	chr6	+	164758339	164758597	True	NM_206855,NR_037593	chr6,chr6	+,-	QKI,LOC100526820	-922715,-923357
chr17:48290151-48291096	chr17	+	48290444	48291086	True	NM_001135697,NM_000088	chr17,chr17	+,-	SGCA,COL1A1	-47136,-11444
chr12:56551034-56551614	chr12	+	56551284	56551656	True	NM_021019,NM_002475,NM_079423,NM_001130420,NM_001199629	chr12,chr12,chr12,chr12,chr12	+,+,+,-,+	MYL6,MYL6B,MYL6,SMARCC2,MYL6B	388,-5131,388,31745,-5131
chr5:130506391-130506741	chr5	+	130506410	130506626	True	NM_181705,NR_024611,NR_024610,NM_005340	chr5,chr5,chr5,chr5	+,-,-,-	LYRM7,HINT1,HINT1,HINT1	14,-5384,-5376,-5376
chr4:37247110-37247369	chr4	+	37247180	37247380	True	NM_001085399,NM_001144990	chr4,chr4	-,+	RELL1,KIAA1239	440669,-543
chr2:85837431-85837972	chr2	+	85837433	85837781	True	NR_033179,NM_006590,NM_001013649,NM_001031738	chr2,chr2,chr2,chr2	-,+,-,-	TMEM150A,USP39,C2orf68,TMEM150A	-7611,5501,1456,-7611
chr16:20492146-20493379	chr16	+	20492276	20492982	True	NM_174924,NM_001010845	chr16,chr16	-,+	PDILT,ACSM2A	-76243,-29469
chr16:20492146-20493379	chr16	-	20553496	20554202	False	NM_001105069,NM_001010845	chr16,chr16	-,+	ACSM2B,ACSM2A	33544,-90696
chr1:25942870-25943155	chr1	+	25942910	25943000	True	NM_020379,NM_138618	chr1,chr1	+,-	MAN1C1,RHCE	958,-195547
chr11:47470645-47471001	chr11	+	47470661	47470897	True	NM_152264,NM_032645,NM_005055	chr11,chr11,chr11	+,-,-	SLC39A13,RAPSN,RAPSN	-40666,-3,-3
chr3:155589577-155590007	chr3	+	155589627	155590020	True	NM_003875,NM_004733	chr3,chr3	+,-	GMPS,SLC33A1	-1353,-17379
chr15:25430630-25430906	chr15	+	25430673	25430955	True	NR_003358,NR_003296,NR_003298,NR_003305,NR_003344,NR_003351,NR_003299,NM_130838,NR_003300,NR_003301,NR_003302,NR_003303,NR_003304,NR_003297,NR_003306	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,-,+,+,+,+,+,+,+	SNORD115-43,SNORD115-4,SNORD115-6,SNORD115-13,SNORD115-29,SNORD115-36,SNORD115-7,UBE3A,SNORD115-8,SNORD115-9,SNORD115-10,SNORD115-11,SNORD115-12,SNORD115-5,SNORD115-14	3605,-8745,-5080,7512,3605,3605,-3192,219748,-1271,24,24,3605,24,27,9112
chr7:2720118-2720479	chr7	+	2720251	2720477	True	NM_133463,NM_152743	chr7,chr7	+,-	AMZ1,BRAT1	-1139,-124859
chr2:242126785-242127606	chr2	+	242126790	242127655	True	NM_015148,NM_001001666,NM_001001891	chr2,chr2,chr2	-,+,+	PASK,ANO7,ANO7	-37912,268,268
chr14:71786865-71787169	chr14	+	71786913	71787213	True	NR_001276,NM_033141	chr14,chr14	+,-	SNORD56B,MAP3K9	77840,-511025
chr22:19743992-19744225	chr22	+	19744032	19744136	True	NM_005992,NM_024627,NM_080647,NM_080646	chr22,chr22,chr22,chr22	+,-,+,+	TBX1,C22orf29,TBX1,TBX1	89,98285,89,89
chr19:11690792-11691504	chr19	+	11691110	11691399	True	NM_001611,NM_145295,NM_001111036,NM_001111035,NM_001111034	chr19,chr19,chr19,chr19,chr19	-,+,-,-,-	ACP5,ZNF627,ACP5,ACP5,ACP5	-2557,16835,-1309,-1309,-1518
chr5:175965439-175966164	chr5	+	175965498	175966201	True	NM_001171976,NM_014901	chr5,chr5	+,-	CDHR2,RNF44	3310,-1077
chr2:241508741-241509485	chr2	+	241508793	241509315	True	NM_001033575,NM_017844,NM_018226	chr2,chr2,chr2	+,-,+	DUSP28,ANKMY1,RNPEPL1	-9373,-11388,-840
chr1:202683987-202684467	chr1	+	202683987	202684507	True	NR_002929,NM_177402	chr1,chr1	+,-	LOC148709,SYT2	146374,-4436
chr19:12776314-12776838	chr19	+	12776323	12776814	True	NM_001099737,NM_001173498,NM_032332,NM_000528,NM_016145,NR_029375	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,-,-,+	WDR83,MAN2B1,WDR83,MAN2B1,C19orf56,WDR83	803,828,3702,828,3702,803
chrX:118699446-118701310	chrX	+	118699534	118701362	True	NM_181762,NM_001170569,NM_003336,NM_001170570,NM_022101	chrX,chrX,chrX,chrX,chrX	+,-,+,-,-	UBE2A,CXorf56,UBE2A,CXorf56,CXorf56	7136,-162,7136,-137,-137
chr16:88921867-88922680	chr16	+	88921903	88922633	True	NM_016209,NM_000512	chr16,chr16	+,-	TRAPPC2L,GALNS	872,791
chr16:55589817-55590409	chr16	+	55590022	55590414	True	NM_032330,NM_001025194	chr16,chr16	+,-	CAPNS2,CES1	10169,276711
chr18:51932960-51933556	chr18	+	51932959	51933577	True	NM_173529,NM_139171	chr18,chr18	+,-	C18orf54,STARD6	-47839,-52016
chr16:79709876-79710962	chr16	+	79709879	79710691	True	NM_005360,NM_130897	chr16,chr16	-,+	MAF,DYNLRB2	-75257,864162
chr2:7003682-7004865	chr2	+	7003690	7004744	True	NM_207315,NM_080657	chr2,chr2	-,+	CMPK2,RSAD2	1242,13051
chr3:37493893-37494097	chr3	+	37493993	37494075	True	NM_002207,NM_017724	chr3,chr3	+,-	ITGA9,LRRFIP2	-231,-276142
chr19:21688760-21688983	chr19	+	21688818	21688990	True	NM_001001415,NM_021269	chr19,chr19	+,-	ZNF429,ZNF708	-432,-176606
chr21:48004701-48006046	chr21	+	48005213	48005922	True	NM_006272,NM_001535	chr21,chr21	-,+	S100B,PRMT2	19174,49604
chr1:45768536-45769000	chr1	+	45768827	45768885	True	NR_024270,NM_001048174	chr1,chr1	+,-	LOC400752,MUTYH	696,36796
chr11:18750243-18750578	chr11	+	18750499	18750567	True	NM_153347,NM_173588	chr11,chr11	+,-	TMEM86A,IGSF22	-30199,-2722
chr12:27084299-27084734	chr12	+	27084413	27084703	True	NM_001171887,NM_001171888,NM_015633,NM_018164	chr12,chr12,chr12,chr12	+,+,+,-	FGFR1OP2,FGFR1OP2,FGFR1OP2,C12orf11	6601,6601,6601,6609
chr17:39222089-39222524	chr17	+	39222181	39222557	True	NM_001165252,NM_033184,NM_033061	chr17,chr17,chr17	-,-,+	LOC730755,KRTAP2-4,KRTAP4-7	-5837,-50,17901
chr6:31371077-31371292	chr6_qbl_hap6	+	2664531	2664623	False	NM_001177519,NM_000247,NR_036523,NR_036524,NM_005514	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	+,+,+,+,-	MICA,MICA,MICA,MICA,HLA-B	193,193,-3575,-2663,-46026
chr6:31371077-31371292	chr6	+	31371085	31371177	True	NM_001177519,NM_000247,NR_036523,NR_036524,NM_005514	chr6,chr6,chr6,chr6,chr6	+,+,+,+,-	MICA,MICA,MICA,MICA,HLA-B	193,193,-3575,-2663,-46096
chr6:31371077-31371292	chr6_mann_hap4	+	2717519	2717611	False	NM_001177519,NM_000247,NR_036523,NR_036524,NM_005514	chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4	+,+,+,+,-	MICA,MICA,MICA,MICA,HLA-B	193,193,-3573,-2661,-46075
chr6:31371077-31371292	chr6_ssto_hap7	+	2704882	2704974	False	NM_001177519,NM_000247,NR_036523,NR_036524,NM_005514	chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7	+,+,+,+,-	MICA,MICA,MICA,MICA,HLA-B	193,193,-3574,-2662,-46134
chr6:31371077-31371292	chr6_cox_hap2	+	2883784	2883876	False	NM_001177519,NM_000247,NR_036523,NR_036524,NM_005514	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,+,+,+,-	MICA,MICA,MICA,MICA,HLA-B	193,193,-3578,-2666,-46107
chr14:60864983-60865416	chr1	+	145509232	145509477	False	NR_002328,NM_005105,NM_003846,NM_001184795	chr1,chr1,chr1,chr1	-,+,+,+	GNRHR2,RBM8A,PEX11B,PEX11B	6660,-1726,6687,7082
chr14:60864983-60865416	chr14	+	60865020	60865265	True	NM_007374,NM_174978	chr14,chr14	+,-	SIX6,C14orf39	110672,87560
chr1:149859551-149859831	chr1	+	149859563	149859869	True	NM_175065,NM_003528,NM_003517	chr1,chr1,chr1	-,-,+	HIST2H2AB,HIST2H2BE,HIST2H2AC	-97,-1331,-1089
chr11:8831286-8832006	chr11	+	8831407	8831956	True	NM_139157,NM_213618,NM_020642	chr11,chr11,chr11	-,-,+	ST5,ST5,C11orf17	976,318,100744
chr21:46960751-46961022	chr21	+	46960832	46961038	True	NM_130444,NM_194255,NM_001205206,NM_001205207	chr21,chr21,chr21,chr21	+,-,-,-	COL18A1,SLC19A1,SLC19A1,SLC19A1	-85459,1397,1397,-6290
chr9:130525354-130525716	chr9	+	130525437	130525664	True	NM_001142532,NM_001142533,NM_001142531,NM_001142534,NR_036055,NM_005489	chr9,chr9,chr9,chr9,chr9,chr9	-,-,-,-,+,-	SH2D3C,SH2D3C,SH2D3C,SH2D3C,MIR2861,SH2D3C	-740,-7854,-718,-7876,22532,8008
chr3:195714568-195716275	chr3	+	195714999	195716222	True	NR_034088,NR_003264	chr3,chr3	+,-	LOC401109,SDHAP1	153284,978
chr3:195714568-195716275	chr3	-	195386153	195386567	False	NM_001647,NR_003265	chr3,chr3	-,+	APOD,SDHAP2	-75077,-1295
chr3:195714568-195716275	chr3	+	197352589	197353811	False	NR_003266,NM_001011537	chr3,chr3	-,+	LOC220729,FYTTD1	991,122612
chr15:93326137-93327539	chr15	+	93326348	93326917	True	NR_033769,NM_207446	chr15,chr15	+,-	ASB9P1,FAM174B	11796,-127317
chr11:85568702-85569778	chr11	+	85568720	85569803	True	NM_032943,NM_173556	chr11,chr11	-,+	SYTL2,CCDC83	-46542,-2627
chr3:72492397-72493250	chr3	+	72492700	72493214	True	NM_001080393,NM_012234	chr3,chr3	+,-	GXYLT2,RYBP	444170,2610
chr22:44394740-44395123	chr22	+	44394741	44395115	True	NM_001003828,NM_138814	chr22,chr22	+,-	PARVB,PNPLA5	57,-106848
chr12:24714650-24714961	chr12	+	24714669	24714941	True	NR_030625,NM_152989	chr12,chr12	+,-	MIR920,SOX5	-349365,489
chr5:151137249-151137663	chr5	+	151137329	151137701	True	NM_005754,NM_004045	chr5,chr5	+,-	G3BP1,ATOX1	13774,559
chr17:43860817-43861079	chr17_ctg5_hap1	-	1006474	1006694	False	NM_001145146,NM_001145147,NR_024559,NM_004382,NM_001145148	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	-,-,+,-,-	CRHR1,CRHR1,LOC100128977,CRHR1,CRHR1	-591,-591,-111831,-591,-591
chr17:43860817-43861079	chr17	+	43860834	43861054	True	NM_001145146,NM_001145147,NR_024559,NM_004382,NM_001145148	chr17,chr17,chr17,chr17,chr17	+,+,-,+,+	CRHR1,CRHR1,LOC100128977,CRHR1,CRHR1	591,591,111875,591,591
chr5:56111442-56111652	chr5	+	56111483	56111671	True	NM_152622,NM_005921	chr5,chr5	-,+	MIER3,MAP3K1	136333,-634
chr13:98086797-98087074	chr13	+	98086826	98087054	True	NM_080818,NM_021033	chr13,chr13	-,+	OXGR1,RAP2A	-440222,-402
chr13:25484606-25485713	chr13	+	25484780	25485593	True	NM_018451,NM_031277	chr13,chr13	-,+	CENPJ,RNF17	11545,-146537
chr15:59664740-59664959	chr15	+	59664802	59664990	True	NM_152450,NM_004998	chr15,chr15	+,-	FAM81A,MYO1E	65381,131
chr19:40727096-40727437	chr19	+	40727195	40727414	True	NM_002446,NM_152479,NM_024877	chr19,chr19,chr19	+,-,-	MAP3K10,TTC9B,CNTD2	-29596,-2889,5234
chr10:54074615-54074824	chr10	+	54074678	54074822	True	NM_012242,NM_000242	chr10,chr10	+,-	DKK1,MBL2	-688,456688
chr2:149634401-149634641	chr2	+	149634464	149634616	True	NM_015702,NM_004522	chr2,chr2	-,+	MMADHC,KIF5C	809764,-1696
chr5:180287635-180287902	chr5	+	180287643	180287863	True	NR_027183,NM_152283,NM_001172638	chr5,chr5,chr5	+,-,-	LOC729678,ZFP62,ZFP62	-30735,473,473
chr1:228296588-228296795	chr1	+	228296588	228296826	True	NM_181456,NM_181454,NM_181455,NM_181441,NR_037415,NM_181465,NM_181464,NM_024319,NM_181463,NM_181462	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,+,-,-,-,-,-	MRPL55,MRPL55,MRPL55,MRPL55,MIR3620,MRPL55,MRPL55,C1orf35,MRPL55,MRPL55	237,237,237,237,-11675,237,237,-5566,237,237
chr3:191298171-191299731	chr3	+	191298319	191299464	True	NM_001083308,NM_198152	chr3,chr3	+,-	PYDC2,UTS2D	-119418,-249994
chr14:94390036-94391043	chr14	+	94390179	94391013	True	NM_138344,NR_027004	chr14,chr14	+,-	FAM181A,C14orf86	-4979,1755
chr16:2095527-2096002	chr16	+	2095773	2095969	True	NM_002528,NM_001077183,NM_001114382,NM_000548	chr16,chr16,chr16,chr16	-,+,+,+	NTHL1,TSC2,TSC2,TSC2	1948,2020,2020,2020
chr21:33091731-33091976	chr21	+	33091730	33091821	True	NM_000454,NM_001145444	chr21,chr21	+,-	SOD1,SCAF4	-59848,12665
chr22:18779374-18780731	chr22	+	18779600	18780746	True	NM_005675,NR_003267	chr22,chr22	+,-	DGCR6,GGT3P	112989,-126
chr22:18779374-18780731	chr22	+	21580708	21580770	False	NR_024583,NR_002829	chr22,chr22	+,-	POM121L8P,P2RX6P	55943,-182170
chr22:18779374-18780731	chr22	-	25006112	25006183	False	NM_005265,NM_207644,NM_001032365,NM_001032364	chr22,chr22,chr22,chr22	+,-,+,+	GGT1,C22orf36,GGT1,GGT1	-6992,-17077,-2546,-7048
chrX:151900992-151902141	chrX	+	151901146	151902110	True	NM_001166387,NM_001166386,NM_001102576,NM_005367,NM_153478	chrX,chrX,chrX,chrX,chrX	-,-,+,-,+	MAGEA12,MAGEA12,CSAG1,MAGEA12,CSAG1	1124,1041,1117,1124,1117
chr22:21270757-21271023	chr22	+	21270976	21271038	True	NM_058004,NM_005207	chr22,chr22	-,+	PI4KA,CRKL	-57906,675
chr8:133777699-133779003	chr8	+	133777730	133778650	True	NM_001145153,NM_016018,NM_198513,NM_032205,NM_144649	chr8,chr8,chr8,chr8,chr8	-,+,+,+,-	TMEM71,PHF20L1,PHF20L1,PHF20L1,TMEM71	-4816,8953,8953,8953,-4816
chr5:55524545-55526212	chr5	+	55524711	55525868	True	NM_024669,NM_139017	chr5,chr5	-,+	ANKRD55,IL31RA	3368,-377428
chr19:11072321-11073596	chr19	+	11072343	11073614	True	NM_001128844,NM_024029,NM_003072,NM_001128849	chr19,chr19,chr19,chr19	+,-,+,+	SMARCA4,YIPF2,SMARCA4,SMARCA4	-796,-32986,-796,-586
chr1:160849815-160850446	chr1	+	160850130	160850472	True	NM_002348,NM_017625	chr1,chr1	+,-	LY9,ITLN1	-84256,4538
chr1:178332643-178332951	chr1	+	178332696	178332960	True	NM_004841,NR_027982	chr1,chr1	+,-	RASAL2,LOC100302401	-22151,-269568
chr19:53231511-53233366	chr19	+	53231939	53233202	True	NR_023311,NM_001161499,NM_001161500,NM_001161501,NM_030972	chr19,chr19,chr19,chr19,chr19	+,-,-,-,-	ZNF137P,ZNF611,ZNF611,ZNF611,ZNF611	-132053,5155,5155,5145,-17
chr6:97247569-97249234	chr6	+	97247569	97248955	True	NM_052904,NM_001143957	chr6,chr6	+,-	KLHL32,GPR63	123540,36448
chr1:94140192-94140443	chr1	+	94140273	94140481	True	NR_034091,NM_003567	chr1,chr1	+,-	LOC100129046,BCAR3	-82799,6954
chr4:6476287-6478278	chr4	+	6476320	6477959	True	NM_020416,NM_015274	chr4,chr4	-,+	PPP2R2C,MAN2B2	-1994,98942
chr2:32489369-32490063	chr2	+	32489676	32490042	True	NM_032312,NM_021209,NM_001199138,NM_001199139	chr2,chr2,chr2,chr2	+,-,-,-	YIPF4,NLRC4,NLRC4,NLRC4	12915,820,-43,697
chr3:50647992-50648834	chr3	+	50648193	50648745	True	NM_013324,NM_145071,NM_004635	chr3,chr3,chr3	-,-,+	CISH,CISH,MAPKAPK3	567,567,5855
chr19:51329814-51330051	chr19	+	51329924	51330018	True	NM_138564,NM_001030050,NM_138563,NM_002257,NM_017509	chr19,chr19,chr19,chr19,chr19	-,+,-,-,-	KLK15,KLK3,KLK15,KLK1,KLK15	4811,28152,4811,-2881,4811
chr17:40024079-40024411	chr17	+	40024183	40024333	True	NM_018143,NM_152467	chr17,chr17	-,+	KLHL11,KLHL10	-2554,-30191
chr6:127835603-127836013	chr6	+	127835609	127835875	True	NM_001010905,NM_001012279	chr6,chr6	+,-	C6orf58,C6orf174	62443,4675
chr15:35529404-35529972	chr15	+	35529440	35529972	True	NR_003144,NR_037507	chr15,chr15	+,-	LOC723972,MIR3942	-30,134643
chr7:2284390-2285421	chr7	+	2284500	2285188	True	NM_198954,NM_002452,NM_198952,NM_198950,NM_013393,NM_198948,NM_198949,NM_198953	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,-,+,+,+	NUDT1,NUDT1,NUDT1,NUDT1,FTSJ2,NUDT1,NUDT1,NUDT1	-2011,-2694,-2655,-2655,-2667,-2694,-2694,-2011
chr11:19139202-19140748	chr11	+	19139270	19140646	True	NM_054030,NM_019028,NM_001001483	chr11,chr11,chr11	-,+,+	MRGPRX2,ZDHHC13,ZDHHC13	-57042,-629,-629
chr20:62481295-62481745	chr20	+	62481331	62481651	True	NM_080622,NM_025224	chr20,chr20	+,-	ABHD16B,ZBTB46	10914,-44475
chr9:74525021-74525280	chr9	+	74525046	74525260	True	NM_001025780,NM_182505,NM_016014	chr9,chr9,chr9	-,+,-	FAM108B1,C9orf85,FAM108B1	938,1162,938
chr16:86542941-86543171	chr16	+	86542944	86543168	True	NM_001451,NR_036444,NR_033925	chr16,chr16,chr16	+,-,-	FOXF1,LOC400550,LOC400550	964,-478,-478
chr11:20384659-20385278	chr11	+	20384671	20385100	True	NM_001029865,NM_006410,NM_001098521,NM_001098520,NM_001098523,NM_001098522	chr11,chr11,chr11,chr11,chr11,chr11	-,+,+,+,+,+	DBX1,HTATIP2,HTATIP2,HTATIP2,HTATIP2,HTATIP2	-202801,130,146,188,586,302
chr15:25427069-25427485	chr15	+	25427071	25427511	True	NR_003358,NR_003296,NR_003351,NR_003344,NR_003298,NR_003299,NM_130838,NR_003300,NR_003301,NR_003302,NR_003303,NR_003304,NR_003297,NR_003294,NR_003295	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,-,+,+,+,+,+,+,+,+	SNORD115-43,SNORD115-4,SNORD115-36,SNORD115-29,SNORD115-6,SNORD115-7,UBE3A,SNORD115-8,SNORD115-9,SNORD115-10,SNORD115-11,SNORD115-12,SNORD115-5,SNORD115-2,SNORD115-3	7049,-5143,7049,7049,-1478,20,223192,1941,-3234,-3234,7049,-3234,-3237,-9340,-7048
chr15:93015423-93017076	chr15	+	93015621	93017008	True	NR_021493,NM_153040	chr15,chr15	-,+	LOC100144604,C15orf32	98535,-766
chr14:105556416-105556733	chr14	+	105556493	105556633	True	NM_174891,NM_013345	chr14,chr14	+,-	C14orf79,GPR132	-103928,-24739
chr7:34861768-34862741	chr7	+	34861793	34862476	True	NR_015356,NM_207173	chr7,chr7	-,+	AAA1,NPSR1	11523,-163947
chr6:116717436-116718667	chr6	+	116717552	116718226	True	NM_003309,NM_013352	chr6,chr6	-,+	TSPYL1,DSE	-116272,-25493
chr7:17058788-17060484	chr7	+	17058914	17060166	True	NM_176813,NM_014399	chr7,chr7	-,+	AGR3,TSPAN13	-137301,-265621
chr1:13522628-13523143	chr1	+	13522713	13522773	True	NM_001100114,NM_001099852,NM_001099850	chr1,chr1,chr1	+,+,-	PRAMEF21,PRAMEF20,PRAMEF18	-801,-6698,-45144
chr1:13522628-13523143	chr1	+	13743552	13743612	False	NM_001100114,NM_001099852,NM_001099850	chr1,chr1,chr1	+,+,-	PRAMEF21,PRAMEF20,PRAMEF18	-801,-6696,-45147
chr17:39136443-39136777	chr17	+	39136442	39136792	True	NM_033061,NM_182497	chr17,chr17	+,-	KRTAP4-7,KRT40	103666,6645
chr9:101015069-101016281	chr9	+	101015196	101016268	True	NM_018946,NM_018421	chr9,chr9	+,-	NANS,TBC1D2	-196288,1785
chr20:44652676-44654004	chr20	+	44652875	44653970	True	NM_001134771,NM_022095,NM_020708	chr20,chr20,chr20	+,-,+	SLC12A5,ZNF335,SLC12A5	-2597,-52042,3850
chr1:150334366-150335629	chr1	+	150334837	150335649	True	NM_016022,NM_015203	chr1,chr1	-,+	APH1A,RPRD2	-93305,1340
chr4:77170670-77171977	chr4	+	77171710	77171977	True	NM_005506,NM_001136570	chr4,chr4	-,+	SCARB2,FAM47E	-36658,875
chr14:64755558-64755950	chr14	+	64755719	64755921	True	NM_182910,NM_001040275,NM_001437	chr14,chr14,chr14	+,-,-	SYNE2,ESR2,ESR2	-73111,5257,5257
chr11:13032091-13032455	chr11	+	13032141	13032439	True	NM_001080521,NM_032320	chr11,chr11	+,-	RASSF10,BTBD10	-1222,452449
chrX:40750846-40751940	chrX	+	40750846	40751520	True	NR_027761,NM_001039590	chrX,chrX	-,+	LOC100132831,USP9X	-58397,193367
chr15:65204919-65205215	chr15	+	65204927	65205209	True	NM_182703,NM_001127889	chr15,chr15	+,-	ANKDD1A,SPG21	-877,76653
chr19:6740979-6742323	chr19	+	6741072	6741725	True	NM_004240,NM_001080452	chr19,chr19	+,-	TRIP10,GPR108	-1416,-3439
chr19:45176792-45178107	chr19	+	45176798	45178143	True	NM_001127893,NM_020219,NR_027754	chr19,chr19,chr19	+,+,-	CEACAM19,CEACAM19,CEACAM22P	-2125,-2125,-116648
chr2:46707387-46708195	chr2	+	46707387	46708189	True	NM_080653,NM_001145051	chr2,chr2	-,+	ATP6V1E2,LOC388946	38957,-740
chr17:62777134-62777434	chr17	+	62777244	62777304	True	NR_026899,NM_138363,NR_027487	chr17,chr17,chr17	-,+,-	LOC146880,CCDC45,LOC146880	863,-274137,368
chr8:143543572-143543836	chr8	+	143543577	143543823	True	NM_145003,NM_001702	chr8,chr8	-,+	TSNARE1,BAI1	-59034,1553
chr20:39894135-39895478	chr20	+	39894166	39895018	True	NM_015035,NM_022896	chr20,chr20	-,+	ZHX3,LPIN3	33771,74541
chr1:155165344-155165658	chr1	+	155165344	155165698	True	NM_001204287,NM_001204286,NM_001204285,NM_001204297,NM_001204290,NM_001204291,NM_001204292,NM_001204293,NM_002456,NM_001204296,NR_030281,NM_001204288,NM_001044393,NM_001044392,NM_001044391,NM_001044390,NM_001204289,NM_001018017,NM_001018016,NM_001204295,NM_001204294	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,-,-,-,-,-,+,-,-,-,-,-,-,-,-,-,-	MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MIR92B,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1	-2638,-2638,-2638,-2638,-2638,-2638,-2638,-2638,-2638,-2638,-429,-2638,-2638,-2638,-2638,-2638,-2638,-2638,-2638,-2638,-2638
chr7:99867492-99867964	chr7	+	99867902	99867980	True	NR_028040,NM_001004351,NR_028039,NR_028038,NM_178831	chr7,chr7,chr7,chr7,chr7	-,+,-,-,-	GATS,SPDYE3,GATS,GATS,GATS	1925,37344,1925,1925,1925
chr2:189640256-189641777	chr2	+	189640491	189641728	True	NM_052952,NM_000090	chr2,chr2	-,+	DIRC1,COL3A1	13163,197370
chr11:35641586-35641936	chr11	+	35641645	35641927	True	NM_015430,NM_014344	chr11,chr11	-,+	PAMR1,FJX1	-94469,-1961
chr19:45247861-45248644	chr19	+	45247871	45248552	True	NM_005178,NR_027754	chr19,chr19	+,-	BCL3,CEACAM22P	3425,-187721
chr14:20128534-20129070	chr22	+	16396297	16396640	False	NM_001005239,NR_001591	chr22,chr22	-,+	OR11H1,psiTPTE22	53225,686160
chr14:20128534-20129070	chr14	+	20128600	20128943	True	NM_001197287,NM_172194	chr14,chr14	-,+	OR11H2,OR4Q3	53609,86643
chr14:20128534-20129070	chr14	-	19430879	19431104	False	NM_001145442,NM_001013354	chr14,chr14	-,+	POTEM,OR11H12	589227,-53337
chr8:68880339-68881476	chr8	+	68880348	68881461	True	NM_024870,NM_020361	chr8,chr8	+,-	PREX2,CPA6	-15796,-221728
chr12:51718650-51719338	chr12	+	51718851	51719345	True	NM_001136269,NM_016293	chr12,chr12	+,-	DAZAP2,BIN2	-86394,-913
chr1:238039721-238040710	chr1	+	238040079	238040759	True	NR_027247,NM_021186	chr1,chr1	+,-	LOC100130331,ZP4	-14655,13515
chr1:48246199-48246484	chr1	+	48246199	48246531	True	NM_001194986,NM_004474	chr1,chr1	-,+	LOC388630,FOXD2	216081,-344561
chr5:7397991-7398914	chr5	+	7398005	7398842	True	NR_033906,NM_020546	chr5,chr5	-,+	LOC442132,ADCY2	-91178,-1715
chr14:88885961-88886597	chr14	+	88886182	88886641	True	NM_021161,NM_018418	chr14,chr14	-,+	KCNK10,SPATA7	-92926,-34255
chr11:1243874-1244297	chr11	+	1243959	1244161	True	NM_019009,NM_002458	chr11,chr11	-,+	TOLLIP,MUC5B	86781,133
chr1:114502920-114504315	chr1	+	114502975	114503974	True	NM_181358,NM_198269,NM_006594	chr1,chr1,chr1	+,+,-	HIPK1,HIPK1,AP4B1	-6538,-9270,-55234
chr16:447834-448135	chr16	+	447854	448159	True	NM_005009,NM_021259,NM_020664	chr16,chr16,chr16	+,-,+	NME4,TMEM8A,DECR2	-713,-15904,3698
chr11:66023580-66024665	chr11	+	66024172	66024694	True	NM_001134775,NM_001134774,NM_001134776,NM_022822,NM_020470	chr11,chr11,chr11,chr11,chr11	+,+,+,+,-	KLC2,KLC2,KLC2,KLC2,YIF1A	70,479,396,479,31994
chr18:74173993-74174520	chr18	+	74174064	74174520	True	NR_015417,NM_014643	chr18,chr18	+,-	LOC284276,ZNF516	66091,32676
chr4:42659174-42659378	chr4	+	42659315	42659417	True	NM_001080476,NM_001105529,NM_006095	chr4,chr4,chr4	+,-,-	GRXCR1,ATP8A1,ATP8A1	235865,-193,-193
chr6:132271181-132271499	chr6	+	132271241	132271437	True	NM_006208,NM_001901	chr6,chr6	+,-	ENPP1,CTGF	-142136,1131
chr3:36981472-36981708	chr3	+	36981664	36981718	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	4880,53122
chr20:60722644-60723227	chr20	+	60723006	60723091	True	NM_198935,NM_002792	chr20,chr20	+,-	SS18L1,PSMA7	-4235,-4532
chr3:52000687-52001285	chr3	+	52001058	52001250	True	NM_001174100,NM_001146314,NM_033010,NR_027476,NM_015407,NR_037192,NM_033008,NM_032750,NM_020418	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,+,+,-,-,-	PCBP4,ABHD14B,PCBP4,ABHD14B,ABHD14A,ABHD14A-ACY1,PCBP4,ABHD14B,PCBP4	282,7446,-4150,7446,7791,7791,282,7446,250
chr17:26803260-26804370	chr17	+	26803444	26803822	True	NM_080669,NM_003984,NM_001145976,NM_001145975,NR_027384	chr17,chr17,chr17,chr17,chr17	-,+,+,+,+	SLC46A1,SLC13A2,SLC13A2,SLC13A2,SLC13A2	-70216,-2833,-2833,-2833,-2833
chr5:95185156-95185867	chr5	+	95185221	95185695	True	NR_026936,NM_002064	chr5,chr5	+,-	C5orf27,GLRX	2240,-26644
chr12:51986082-51986293	chr12	+	51986149	51986344	True	NM_014191,NM_007210	chr12,chr12	+,-	SCN8A,GALNT6	-1186,-200949
chr17:79493511-79494297	chr17	+	79493702	79493930	True	NM_001077182,NM_012418,NR_037688	chr17,chr17,chr17	+,+,-	FSCN2,FSCN2,ACTG1	1486,1486,-13810
chr10:28846857-28847434	chr10	+	28847026	28847403	True	NR_033805,NM_100486	chr10,chr10	-,+	LOC220906,WAC	-25743,-24655
chr4:39031256-39032394	chr4	+	39031517	39032437	True	NM_024943,NM_001007075	chr4,chr4	-,+	TMEM156,KLHL5	1663,14013
chr17:80190706-80190917	chr17	+	80190722	80190949	True	NM_001042423,NM_001042422,NM_004207,NM_198082	chr17,chr17,chr17,chr17	+,+,+,-	SLC16A3,SLC16A3,SLC16A3,CCDC57	-629,-4480,-3884,-20033
chr5:150079404-150079837	chr5	+	150079445	150079872	True	NM_018047,NM_133371	chr5,chr5	-,+	RBM22,MYOZ3	852,-39104
chr12:56758735-56759408	chr12	+	56759102	56759194	True	NM_198332,NM_005419,NM_016584,NM_001638	chr12,chr12,chr12,chr12	-,-,+,-	STAT2,STAT2,IL23A,APOF	-5065,-5065,-26494,-2519
chr20:44541848-44542686	chr20	+	44541866	44542010	True	NM_006227,NM_182676,NM_022104	chr20,chr20,chr20	-,-,+	PLTP,PLTP,PCIF1	-1080,-1080,21306
chr4:6912045-6912268	chr4	+	6912168	6912290	True	NM_001113361,NM_153376,NM_020773	chr4,chr4,chr4	+,-,+	TBC1D14,CCDC96,TBC1D14	-1048,132488,-724
chr19:51874408-51874731	chr19	+	51874420	51874746	True	NM_001985,NM_152353,NR_033235,NM_005601	chr19,chr19,chr19,chr19	-,-,+,-	ETFB,CLDND2,LOC100129083,NKG7	-4748,-2163,44413,1264
chr2:131100091-131100319	chr2	+	131100104	131100348	True	NM_033416,NM_032357	chr2,chr2	+,-	IMP4,CCDC115	140,-182
chr7:96759007-96759438	chr7	+	96759023	96759379	True	NM_005221,NM_020186	chr7,chr7	-,+	DLX5,ACN9	-104880,-13169
chr5:146217862-146218803	chr5	+	146218218	146218784	True	NM_006706,NM_004576	chr5,chr5	+,-	TCERG1,PPP2R2B	-391409,39437
chr7:6688839-6689066	chr7	+	6688841	6689115	True	NM_017560,NM_006956	chr7,chr7	+,-	ZNF853,ZNF12	-33365,57501
chr8:42547557-42547950	chr8	+	42547573	42547967	True	NM_001199279,NM_000749	chr8,chr8	-,+	CHRNA6,CHRNB3	76012,4594
chr5:173142174-173142757	chr5	+	173142261	173142710	True	NR_027109,NM_138369	chr5,chr5	+,-	LOC285593,BOD1	-135663,-98595
chr3:53199975-53201149	chr3	+	53200105	53201173	True	NM_006254,NM_052859,NM_212539	chr3,chr3,chr3	+,-,+	PRKCD,RFT1,PRKCD	-4933,-35635,-4933
chrX:150064725-150065750	chrX	+	150064983	150065769	True	NM_031462,NM_001184808,NM_134446,NM_134445,NM_005342	chrX,chrX,chrX,chrX,chrX	-,-,-,-,+	CD99L2,CD99L2,CD99L2,CD99L2,HMGB3	1570,1570,1570,1570,85993
chr3:49132016-49132419	chr3	+	49132021	49132247	True	NM_005051,NM_199070,NM_017730,NM_198880	chr3,chr3,chr3,chr3	-,+,-,-	QARS,NDUFAF3,QRICH1,QRICH1	9974,-72998,-517,-517
chr7:95138735-95139000	chr7	+	95138735	95139022	True	NM_016116,NM_001018161	chr7,chr7	+,-	ASB4,PON2	-23582,-74351
chr10:86084282-86085993	chr10	+	86084886	86085980	True	NM_018999,NM_015613	chr10,chr10	+,-	FAM190B,LRIT1	2429,-83669
chr4:9265129-9265380	chr4	+	9265356	9265428	True	NR_031688,NM_001105662	chr4,chr4	-,+	MIR548I2,USP17	292559,3916
chr4:9265129-9265380	chr4	+	9222636	9222708	False	NR_031688,NM_001105662	chr4,chr4	-,+	MIR548I2,USP17	335279,-5556
chr20:1459100-1459482	chr20	+	1459143	1459503	True	NM_182483,NM_014723	chr20,chr20	-,+	NSFL1C,SNPH	-10726,-212234
chr19:4152630-4152900	chr19	+	4152629	4152856	True	NM_030662,NM_032607	chr19,chr19	-,+	MAP2K2,CREB3L3	-28503,772
chr16:30210087-30210784	chr16	+	30210377	30210791	True	NM_177552,NR_037608,NR_037609,NM_001017390,NM_001014999,NR_002556,NM_001015000,NM_024044,NM_001031827,NM_001039182,NR_002557,NM_178044	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,-,+,+,-,-,-,+	SULT1A3,SLX1A-SULT1A3,SLX1B-SULT1A4,SULT1A4,SLX1A,LOC388242,SLX1A,SLX1B,BOLA2,BOLA2B,LOC613038,SLX1B	-19,-4682,-4682,-19,-5272,7507,-5272,-5272,-4750,-4750,7507,-5272
chr16:30210087-30210784	chr16	+	29471035	29471449	False	NM_177552,NR_037608,NR_037609,NM_001017390,NM_001014999,NR_002556,NM_001015000,NM_024044,NM_001031827,NM_001039182,NR_002557,NM_178044	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,-,+,+,-,-,-,+	SULT1A3,SLX1A-SULT1A3,SLX1B-SULT1A4,SULT1A4,SLX1A,LOC388242,SLX1A,SLX1B,BOLA2,BOLA2B,LOC613038,SLX1B	-19,-4682,-4682,-19,-5272,7500,-5272,-5272,-4750,-4750,7500,-5272
chr20:62185781-62186064	chr20	+	62185821	62186097	True	NM_024059,NM_080823	chr20,chr20	+,-	C20orf195,SRMS	-1499,-6964
chr1:145587479-145588152	chr1	+	145587526	145588201	True	NM_006099,NM_001012758	chr1,chr1	+,-	PIAS3,NUDT17	-11589,1284
chr17:30473770-30474562	chr17	+	30474506	30474571	True	NM_001033566,NM_018307,NM_001033568,NR_002222	chr17,chr17,chr17,chr17	+,+,+,-	RHOT1,RHOT1,RHOT1,ARGFXP2	-5092,-5092,-5092,4070
chr1:244997568-244998171	chr1	+	244997719	244998120	True	NR_026778,NM_198076	chr1,chr1	-,+	NCRNA00201,FAM36A	12174,518
chr11:125915214-125915719	chr11	+	125915340	125915480	True	NM_016952,NM_013264	chr11,chr11	-,+	CDON,DDX25	17760,-141123
chr1:110613463-110614477	chr1	+	110613731	110614299	True	NM_033088,NM_006492	chr1,chr1	+,-	FAM40A,ALX3	-36541,-409
chr17:74023180-74023463	chr17	+	74023269	74023511	True	NM_001258,NM_001988	chr17,chr17	+,-	CDK3,EVPL	-26333,46
chr9:116222653-116223941	chr9	+	116223045	116223961	True	NM_017443,NM_017790	chr9,chr9	-,+	POLE3,RGS3	-50016,2047
chrX:155110065-155110853	chrY	+	59213274	59213882	False	NM_005638,NR_033714,NR_033715,NM_001185183,NR_002179,NM_001145149	chrY,chrY,chrY,chrY,chrY,chrY	+,+,+,+,-,+	VAMP7,VAMP7,VAMP7,VAMP7,TTTY17C,VAMP7	66,66,66,66,-31882354,66
chrX:155110065-155110853	chrX	+	155110268	155110876	True	NM_005638,NR_033714,NR_033715,NM_018196,NM_001185183,NM_001145149	chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,-,+,+	VAMP7,VAMP7,VAMP7,TMLHE,VAMP7,VAMP7	66,66,66,-267646,66,66
chr20:18119031-18120081	chr20	+	18119160	18120097	True	NR_028402,NM_020536,NM_001164811,NM_021220	chr20,chr20,chr20,chr20	+,+,+,-	CSRP2BP,CSRP2BP,PET117,OVOL2	5645,2770,-712,-80639
chr16:70378919-70379450	chr16	+	70378932	70379014	True	NM_018332,NM_001605	chr16,chr16	+,-	DDX19A,AARS	1809,-55520
chr1:90048333-90048810	chr1	+	90048383	90048827	True	NM_015350,NR_033981	chr1,chr1	+,-	LRRC8B,FLJ27354	-24162,49676
chr10:18689919-18690763	chr10	+	18690003	18690802	True	NM_201570,NM_182543	chr10,chr10	+,-	CACNB2,NSUN6	-541,249799
chr4:186391784-186392189	chr4	+	186391919	186392185	True	NM_152775,NM_001114357,NM_001145411	chr4,chr4,chr4	-,+,-	CCDC110,C4orf47,CCDC110	778,-41426,778
chr8:109251502-109253131	chr8	+	109251716	109252854	True	NM_001568,NM_014673	chr8,chr8	-,+	EIF3E,TTC35	8163,202998
chr4:41936612-41937157	chr4	+	41936642	41937204	True	NM_018126,NM_003924	chr4,chr4	+,-	TMEM33,PHOX2B	-68,-185655
chr2:38595553-38597013	chr2	+	38595683	38596318	True	NM_001135673,NR_027252,NR_024191,NM_022374	chr2,chr2,chr2,chr2	-,+,-,-	ATL2,C2orf58,ATL2,ATL2	8167,-237494,8167,8167
chr6:41712184-41713754	chr6	+	41712389	41712985	True	NM_001166424,NM_007162,NM_013397,NM_001167827,NM_002630	chr6,chr6,chr6,chr6,chr6	-,-,+,-,-	PGC,TFEB,PRICKLE4,TFEB,PGC	2204,-9591,35514,-8392,2204
chr6:78494033-78494463	chr6	+	78494065	78494360	True	NM_000863,NM_001010844	chr6,chr6	-,+	HTR1B,IRAK1BP1	-320945,1082828
chr19:45845265-45845563	chr19	+	45845323	45845502	True	NM_177417,NM_001824	chr19,chr19	+,-	KLC3,CKM	-1376,-19090
chr5:140020672-140021362	chr5	+	140020708	140021380	True	NM_001040021,NM_001174104,NM_001185012,NM_006083,NR_037428,NM_001174105,NM_018502,NM_002488,NM_000591,NR_033697	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,+,+,-,+,-,-,-	CD14,CD14,NDUFA2,IK,MIR3655,CD14,TMCO6,NDUFA2,CD14,NDUFA2	-7422,-7422,6040,6003,6048,-7422,-1753,6040,-7673,6040
chr10:106090723-106091114	chr10	+	106090756	106091106	True	NM_001008723,NM_033397	chr10,chr10	+,-	CCDC147,ITPRIP	22415,2607
chr9:112809041-112810281	chr9	+	112809117	112810128	True	NM_001012993,NM_001004065,NM_001198656	chr9,chr9,chr9	-,+,+	C9orf152,AKAP2,AKAP2	160343,749,749
chr17:36827616-36828881	chr17	+	36828189	36828916	True	NM_005937,NM_001130677	chr17,chr17	+,-	MLLT6,C17orf96	32956,2321
chr4:146859158-146859380	chr4	+	146859329	146859427	True	NM_007080,NM_178835	chr4,chr4	+,-	LSM6,ZNF827	237407,230
chr5:96086374-96087332	chr5	+	96086432	96087332	True	NR_033798,NM_016442	chr5,chr5	+,-	CAST,ERAP1	-7252,56610
chr16:30544393-30544654	chr16	+	30544445	30544525	True	NM_023931,NM_024671,NM_002209	chr16,chr16,chr16	-,-,+	ZNF747,ZNF768,ITGAL	1719,-6535,-60514
chr17:40167726-40168840	chr17	+	40168001	40168601	True	NM_003315,NM_001144928,NM_001144766,NM_001144929,NR_029431,NM_017595,NM_001144927,NM_001001349	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,-,+,-,+,+,+	DNAJC7,NKIRAS2,DNAJC7,NKIRAS2,DNAJC7,NKIRAS2,NKIRAS2,NKIRAS2	1164,3485,632,3485,1164,3485,3485,992
chr7:100134723-100135374	chr7	+	100135187	100135249	True	NM_006076,NM_001168682	chr7,chr7	+,-	AGFG2,SAP25	1584,36071
chr22:29947277-29948184	chr22	+	29947694	29947761	True	NM_181825,NM_001002877,NM_001002878,NM_001002879,NM_003678	chr22,chr22,chr22,chr22,chr22	+,-,-,-,-	NF2,THOC5,THOC5,THOC5,THOC5	51783,2030,1938,1938,2030
chr4:48490492-48491673	chr4	+	48490500	48491680	True	NM_175619,NM_152679,NM_003215	chr4,chr4,chr4	+,+,-	ZAR1,SLC10A4,TEC	628,-5191,-218686
chr6:108278661-108278931	chr6	+	108278673	108278895	True	NM_007214,NM_003269	chr6,chr6	-,+	SEC63,NR2E1	637,208319
chr1:211499373-211499750	chr1	+	211499590	211499750	True	NM_004619,NM_001164688,NM_001033910	chr1,chr1,chr1	+,-,+	TRAF5,RD3,TRAF5	206,166559,397
chr5:125759445-125760229	chr5	+	125759453	125760129	True	NM_023927,NM_001182,NM_001146321,NM_001146320	chr5,chr5,chr5,chr5	+,-,+,+	GRAMD3,ALDH7A1,GRAMD3,GRAMD3	-635,171012,-635,-635
chr6:7104488-7105777	chr6	+	7104642	7105501	True	NM_001003700,NM_001003699,NM_001003698,NM_001168344,NM_003144	chr6,chr6,chr6,chr6,chr6	+,+,+,+,-	RREB1,RREB1,RREB1,RREB1,SSR1	2584,2584,2584,2328,208101
chr15:25451156-25451767	chr15	+	25451199	25451807	True	NR_003315,NR_003314,NR_003313,NR_003312,NR_003311,NR_003310,NR_022010,NR_003495,NR_003308,NR_003309,NM_130838,NR_003342,NR_003307	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,+,-,+,+	SNORD115-23,SNORD115-22,SNORD115-21,SNORD115-20,SNORD115-19,SNORD115-18,PAR4,SNORD115-24,SNORD115-16,SNORD115-17,UBE3A,SNORD115-25,SNORD115-15	5135,3257,-25,-25,-1746,-1746,5031,6998,-6655,-1746,198896,8880,-25
chr1:161008918-161010643	chr1	+	161009718	161010532	True	NM_001113206,NM_001113207,NM_007122,NR_033385,NM_207005,NM_001113205	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,-	TSTD1,TSTD1,USF1,KLHDC9,USF1,TSTD1	-944,-944,5275,57618,5275,-944
chr1:22108118-22108494	chr1	+	22108253	22108491	True	NM_001032730,NM_001013693,NM_032236	chr1,chr1,chr1	-,+,-	USP48,LDLRAD2,USP48	1249,30266,1249
chr4:183247130-183247471	chr4	+	183247316	183247518	True	NM_001080477,NR_027107	chr4,chr4	+,-	ODZ3,MGC45800	-2230,-181648
chr6:39011271-39012156	chr6	+	39011779	39012151	True	NM_002062,NM_018322	chr6,chr6	+,-	GLP1R,C6orf64	4405,70764
chr19:35532157-35532414	chr19	+	35532207	35532269	True	NM_182983,NR_024561,NM_002151	chr19,chr19,chr19	+,-,+	HPN,LOC100128675,HPN	-848,64956,-848
chr11:62422058-62423472	chr11	+	62422766	62423273	True	NR_004390,NM_001043229,NM_030628,NM_198335,NM_198334	chr11,chr11,chr11,chr11,chr11	+,+,-,-,-	SNORA57,METTL12,INTS5,GANAB,GANAB	9620,9505,-1992,-8662,-8662
chr16:85618845-85619997	chr16	+	85618953	85619961	True	NM_001134473,NM_016095	chr16,chr16	+,-	KIAA0182,GINS2	25067,102677
chr2:24269384-24270159	chr2	+	24269431	24269997	True	NM_004116,NM_025203,NM_054033,NM_001142319	chr2,chr2,chr2,chr2	+,-,+,-	FKBP1B,C2orf44,FKBP1B,C2orf44	2586,349,2586,349
chr17:46986478-46986923	chr17	+	46986641	46986979	True	NM_023079,NM_007241	chr17,chr17	+,-	UBE2Z,SNF8	-961,35232
chr14:66997159-66998951	chr14	+	66997343	66998969	True	NM_015994,NM_020806	chr14,chr14	-,+	ATP6V1D,GPHN	827801,-23269
chr11:8013188-8013761	chr11	+	8013187	8013800	True	NM_003754,NM_176821	chr11,chr11	+,-	EIF3F,NLRP10	-4379,-28128
chr19:2784368-2784785	chr19	+	2784655	2784750	True	NM_003249,NM_003021	chr19,chr19	+,-	THOP1,SGTA	755,-1301
chr12:5289426-5290008	chr12	+	5289493	5290050	True	NM_006422,NM_002234	chr12,chr12	-,+	AKAP3,KCNA5	-535150,-136460
chr19:57861387-57862461	chr19	+	57861651	57862499	True	NM_020633,NM_020657	chr19,chr19	-,+	VN1R1,ZNF304	105658,145
chr5:145564438-145565826	chr5	+	145564633	145565322	True	NM_020117,NM_018989	chr5,chr5	-,+	LARS,RBM27	-2339,17840
chr5:81022260-81023222	chr5	+	81022303	81022934	True	NM_001131028,NM_012446	chr5,chr5	+,-	ATG10,SSBP2	244909,24193
chr6:41703456-41704242	chr6	+	41703502	41704219	True	NM_001167827,NM_007162,NM_013397	chr6,chr6,chr6	-,-,+	TFEB,TFEB,PRICKLE4	57,-704,44280
chr12:130375631-130376078	chr12	+	130375679	130376097	True	NM_133448,NM_007197	chr12,chr12	-,+	TMEM132D,FZD10	12165,270906
chr20:3138661-3139210	chr20	+	3138927	3139100	True	NM_033453,NM_014948,NM_199415,NM_021826	chr20,chr20,chr20,chr20	+,-,-,-	ITPA,UBOX5,UBOX5,FASTKD5	50955,1502,1502,1494
chr20:35980749-35981203	chr20	+	35980753	35981207	True	NM_198291,NM_021081,NM_005417	chr20,chr20,chr20	+,-,+	SRC,GHRH,SRC	-6247,-95454,-7716
chr12:10183284-10185080	chr12	+	10183351	10184777	True	NM_016509,NM_207345	chr12,chr12	-,+	CLEC1B,CLEC9A	-31452,-126
chr3:53287635-53288655	chr3	+	53288062	53288628	True	NM_001064,NM_001135055,NM_212539	chr3,chr3,chr3	-,-,+	TKT,TKT,PRKCD	1552,1552,-92890
chr11:120001641-120002319	chr11	+	120001694	120002336	True	NM_012101,NM_178507	chr11,chr11	-,+	TRIM29,OAF	6577,79410
chr6:41909878-41910409	chr6	+	41909920	41910427	True	NM_001760,NM_004053,NM_001136125	chr6,chr6,chr6	-,+,-	CCND3,BYSL,CCND3	-368,-21006,-368
chr17:63134427-63134697	chr17	+	63134457	63134723	True	NM_006572,NM_003835,NM_001165933,NM_001081955	chr17,chr17,chr17,chr17	-,+,+,+	GNA13,RGS9,RGS9,RGS9	-81537,-1052,-1052,-1052
chr15:75871573-75871797	chr15	+	75871573	75871801	True	NM_153271,NM_002833	chr15,chr15	+,-	SNX33,PTPN9	69546,52
chr7:72338027-72338386	chr7	+	72338305	72338389	True	NR_003666,NM_172020	chr7,chr7	-,+	SPDYE7P,POM121	1316,11546
chr4:4390072-4390358	chr4	+	4390074	4390376	True	NM_017816,NM_014392,NM_001040101	chr4,chr4,chr4	-,+,+	LYAR,D4S234E,D4S234E	-98178,-2142,-2142
chr6:170600050-170600364	chr6	+	170600109	170600316	True	NM_032448,NM_005618	chr6,chr6	+,-	FAM120B,DLL1	15527,-412
chr9:89627051-89627676	chr9	+	89627105	89627599	True	NR_027471,NM_001001709	chr9,chr9	-,+	LOC440173,C9orf170	29492,135959
chr1:151742355-151743090	chr1	+	151742631	151743128	True	NM_016178,NM_001134939,NM_031420	chr1,chr1,chr1	+,+,-	OAZ3,OAZ3,MRPL9	-3551,-7237,-6591
chr16:89678465-89679216	chr16	+	89678684	89679176	True	NM_001083314,NM_001128141,NM_004413	chr16,chr16,chr16	-,+,+	CHMP1A,DPEP1,DPEP1	45005,539,7823
chr16:2849142-2849520	chr16	+	2849283	2849535	True	NM_152891,NM_001135086	chr16,chr16	-,+	PRSS33,PRSS41	-12575,-848
chr3:48956892-48957658	chr3	+	48956940	48957342	True	NM_006321,NM_001123040	chr3,chr3	+,-	ARIH2,C3orf71	-711,-122
chr1:1935554-1935933	chr1	+	1935558	1935626	True	NM_000815,NM_001080484	chr1,chr1	+,-	GABRD,KIAA1751	15141,-282
chr6:117923117-117923355	chr6	+	117923136	117923342	True	NM_020399,NM_138459,NM_001017408	chr6,chr6,chr6	-,+,-	GOPC,NUS1,GOPC	413,73274,413
chr22:39266633-39266888	chr22	+	39266727	39266870	True	NM_014292,NM_145699	chr22,chr22	-,+	CBX6,APOBEC3A	1438,86656
chr5:14664050-14664258	chr5	+	14664077	14664292	True	NM_138348,NR_037899	chr5,chr5	+,-	FAM105B,LOC100128508	490,112899
chr5:162865154-162865753	chr5	+	162865154	162865694	True	NM_004060,NM_199246,NM_145266	chr5,chr5,chr5	+,+,-	CCNG1,CCNG1,NUDCD2	-628,-628,21507
chr4:2243353-2243625	chr4	+	2243439	2243573	True	NM_001193282,NM_024511	chr4,chr4	+,-	LOC402160,HAUS3	177127,337
chr17:72271720-72272296	chr17	+	72272141	72272333	True	NR_026914,NM_001172810,NM_023036	chr17,chr17,chr17	-,+,+	MGC16275,DNAI2,DNAI2	-62681,-1807,-1807
chr4:17463095-17463872	chr4	+	17463185	17463894	True	NM_000320,NM_001079827	chr4,chr4	-,+	QDPR,CLRN2	50013,52893
chr18:21168181-21168743	chr18	+	21168214	21168640	True	NM_013326,NM_000271	chr18,chr18	+,-	C18orf8,NPC1	-84808,-1633
chr2:241631443-241632041	chr2	+	241631457	241632087	True	NM_198998,NM_001102467	chr2,chr2	+,-	AQP12A,AQP12B	-246,-9140
chr2:241631443-241632041	chr2	-	241621498	241621744	False	NM_198998,NM_001102467	chr2,chr2	+,-	AQP12A,AQP12B	9517,623
chr10:93396407-93397828	chr10	+	93396429	93397631	True	NM_025235,NM_005398	chr10,chr10	+,-	TNKS2,PPP1R3C	160519,-3571
chrX:72100050-72100607	chrX	+	72100141	72100417	True	NM_001080851,NM_033053	chrX,chrX	-,-	DMRTC1B,DMRTC1	-4519,-4519
chrX:72100050-72100607	chrX	-	72060093	72060369	False	NM_001080851,NM_033053	chrX,chrX	+,+	DMRTC1B,DMRTC1	4506,4506
chr4:56451617-56451838	chr4	+	56451797	56451871	True	NM_152401,NM_018475	chr4,chr4	-,+	PDCL2,TMEM165	6558,-189760
chr12:2114223-2115186	chr12	+	2114250	2115051	True	NM_000719,NM_152640	chr12,chr12	+,-	CACNA1C,DCP1B	47364,-573
chr11:65382823-65383220	chr11	+	65382830	65383258	True	NM_032223,NM_002419	chr11,chr11	+,-	PCNXL3,MAP3K11	524,-1110
chr22:50451714-50452933	chr22	+	50451761	50452837	True	NM_001001694,NM_001164104	chr22,chr22	-,+	IL17REL,MOV10L1	-706,75597
chr1:156022208-156023017	chr1	+	156022481	156022935	True	NM_020131,NM_014017,NM_001145264,NM_020387	chr1,chr1,chr1,chr1	-,+,+,+	UBQLN4,LAMTOR2,LAMTOR2,RAB25	631,1581,1581,8030
chr11:118874622-118875896	chr11	+	118874658	118875883	True	NM_198489,NR_003040	chr11,chr11	+,-	CCDC84,RPL23AP64	-5869,-355
chr14:35452134-35452381	chr14	+	35452144	35452306	True	NM_182648,NM_003136,NM_001146282	chr14,chr14,chr14	-,+,+	BAZ1A,SRP54,SRP54	-107291,-91,-91
chr16:89892620-89893315	chr16	+	89892651	89893251	True	NM_032451,NM_000135,NM_001018112	chr16,chr16,chr16	+,-,-	SPIRE2,FANCA,FANCA	1655,-9586,-9586
chr14:21508918-21510477	chr14	+	21508959	21510401	True	NM_001012264,NM_032572	chr14,chr14	-,+	RNASE13,RNASE7	-6015,-17
chr7:143964542-143966448	chr7	+	143964562	143965096	True	NR_002158,NM_001005328,NM_198495	chr7,chr7,chr7	+,-,-	OR2A20P,OR2A7,CTAGE4	31369,-7841,1346
chr7:143964542-143966448	chr7	-	143881843	143882377	False	NM_001003702,NM_198495	chr7,chr7	-,+	ARHGEF35,CTAGE4	10464,-1346
chr7:143964542-143966448	chr6	+	132030376	132030453	False	NM_030908,NM_005021,NM_001145659	chr6,chr6,chr6	-,+,-	OR2A4,ENPP3,CTAGE9	-7835,-71985,1757
chr17:48249072-48249484	chr17	+	48249103	48249385	True	NR_024192,NR_024193,NM_001135697,NM_000023	chr17,chr17,chr17,chr17	-,-,+,+	HILS1,HILS1,SGCA,SGCA	502,502,-5788,-5788
chr7:154788354-154790140	chr7	+	154788567	154789918	True	NR_028090,NM_007349	chr7,chr7	+,-	LOC202781,PAXIP1	5224,4816
chr20:36975869-36976088	chr20	+	36975997	36976087	True	NM_004139,NR_002910	chr20,chr20	+,-	LBP,SNORA71B	-1163,77941
chr8:24812769-24813060	chr8	+	24812785	24813109	True	NM_006158,NM_001105541	chr8,chr8	-,+	NEFL,NEFM	1072,-40381
chr4:44448626-44449484	chr4	+	44448683	44449444	True	NM_198353,NM_021927	chr4,chr4	-,+	KCTD8,GUF1	1431,230988
chr1:956579-956863	chr1	+	956586	956856	True	NM_005101,NM_001142467,NM_198576	chr1,chr1,chr1	+,-,+	ISG15,HES4,AGRN	-7790,-21034,-1134
chr1:155035689-155036258	chr1	+	155035717	155036253	True	NM_182689,NM_144622,NM_182690,NM_005227	chr1,chr1,chr1,chr1	+,-,+,+	EFNA4,DCST2,EFNA4,EFNA4	-41,-29460,-41,-41
chr11:56949596-56949810	chr11	+	56949617	56949807	True	NM_001005210,NM_005161	chr11,chr11	+,-	LRRC55,APLNR	-447,55170
chr2:44001298-44001565	chr2	+	44001413	44001603	True	NM_015522,NM_022436,NM_001193464,NM_016008	chr2,chr2,chr2,chr2	+,-,+,+	DYNC2LI1,ABCG5,DYNC2LI1,DYNC2LI1	-286,64405,-286,-286
chr16:11361018-11362919	chr16	+	11361146	11362912	True	NM_021247,NM_005425,NM_152308,NM_002762	chr16,chr16,chr16,chr16	-,-,+,-	PRM3,TNP2,C16orf75,PRM2	4590,298,76398,7475
chr9:27570787-27571612	chr9	+	27570956	27571457	True	NM_018325,NM_020124,NM_145005	chr9,chr9,chr9	-,+,-	C9orf72,IFNK,C9orf72	2081,-46706,2442
chr1:114412359-114412655	chr1	+	114412372	114412675	True	NM_012411,NR_037864,NM_001193431,NM_015967	chr1,chr1,chr1,chr1	-,+,-,-	PTPN22,LOC100287722,PTPN22,PTPN22	1751,-13173,1751,1751
chr5:10442481-10442871	chr5	+	10442491	10442911	True	NM_031916,NM_138809,NM_001201466	chr5,chr5,chr5	+,-,+	ROPN1L,CMBL,ROPN1L	-568,-134323,-568
chr15:65116564-65116765	chr15	+	65116619	65116757	True	NM_001195059,NM_025049	chr15,chr15	+,-	PLEKHO2,PIF1	17324,1131
chr16:57490265-57490501	chr16	+	57490269	57490523	True	NM_020313,NM_020312,NM_032940	chr16,chr16,chr16	-,+,+	CIAPIN1,COQ9,POLR2C	-8900,-8983,6027
chr1:156124320-156124897	chr1	+	156124484	156124924	True	NM_001093725,NM_001193302,NM_001193301,NM_001193300,NM_022367	chr1,chr1,chr1,chr1,chr1	-,+,+,+,+	MEX3A,SEMA4A,SEMA4A,SEMA4A,SEMA4A	-72695,-1166,-4800,-1213,-1213
chr12:53468976-53470972	chr12	+	53469206	53470972	True	NM_002178,NM_032840	chr12,chr12	+,-	IGFBP6,SPRYD3	20463,2282
chr13:113346706-113347526	chr13	+	113346746	113347502	True	NM_006322,NM_015205,NM_032189	chr13,chr13,chr13	-,+,+	TUBGCP3,ATP11A,ATP11A	-104265,-2154,-2154
chr12:52841260-52841656	chr12	+	52841297	52841517	True	NM_002284,NM_005555	chr12,chr12	+,-	KRT86,KRT6B	-145699,4443
chr17:291249-291722	chr17	+	291267	291653	True	NM_182705,NM_001013672	chr17,chr17	-,+	FAM101B,C17orf97	4128,-31200
chr3:32023638-32024276	chr3	+	32023673	32024311	True	NM_017784,NM_001174060,NM_001137674	chr3,chr3,chr3	-,-,+	OSBPL10,OSBPL10,ZNF860	-331,-331,-461
chr11:64490083-64490298	chr11	+	64490212	64490326	True	NM_153378,NM_138732,NM_015080	chr11,chr11,chr11	+,-,-	SLC22A12,NRXN2,NRXN2	-131981,384,384
chr10:85983434-85984185	chr10	+	85983439	85984099	True	NM_001017924,NM_001012720	chr10,chr10	-,+	LRIT2,RGR	1235,20709
chr6:3905559-3906290	chr6	+	3905573	3906275	True	NM_183373,NM_012135	chr6,chr6	-,+	C6orf145,FAM50B	-153327,-55992
chrX:54522813-54523886	chrX	+	54522962	54523610	True	NM_004463,NM_001184819	chrX,chrX	-,+	FGD1,GNL3L	-363,33033
chr12:96428591-96429053	chr12	+	96428593	96429017	True	NM_000895,NM_152435	chr12,chr12	-,+	LTA4H,AMDHD1	398,-91573
chr5:40757569-40759388	chr5	+	40757912	40759431	True	NM_012382,NM_000958	chr5,chr5	-,+	TTC33,PTGER4	-1840,-77931
chr12:133532239-133532665	chr12	+	133532334	133532414	True	NM_183238,NM_019591,NM_001164715	chr12,chr12,chr12	-,+,-	ZNF605,ZNF26,ZNF605	504,30641,528
chr4:144113610-144115209	chr4	+	144113650	144114845	True	NM_032557,NM_003866	chr4,chr4	+,-	USP38,INPP4B	-7639,-346046
chr19:49459216-49459426	chr19	+	49459234	49459418	True	NM_000146,NM_004324,NM_138764,NM_001161587,NM_138763,NM_138761,NR_027882	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,-,+,+,+	FTL,BAX,BAX,GYS1,BAX,BAX,BAX	9147,-1168,-1168,37242,-1168,-1168,-1168
chr19:50032158-50032616	chr19	+	50032552	50032640	True	NM_020650,NR_029703	chr19,chr19	+,-	RCN3,MIR150	-1728,-28427
chr1:32039134-32039620	chr1	+	32039530	32039594	True	NM_001204414,NM_001204415,NM_022164,NR_033688	chr1,chr1,chr1,chr1	+,+,+,-	TINAGL1,TINAGL1,TINAGL1,PEF1	2491,4151,2491,70674
chr7:130417713-130417914	chr7	+	130417763	130417909	True	NM_138693,NR_029899	chr7,chr7	-,+	KLF14,MIR335	1029,-281862
chr14:81685718-81685957	chr14	+	81685722	81685912	True	NM_201595,NM_015859,NM_000369	chr14,chr14,chr14	-,-,+	GTF2A1,GTF2A1,TSHR	1713,1432,-263904
chr4:6912577-6912793	chr4	+	6912617	6912833	True	NM_001113361,NM_153376,NM_020773	chr4,chr4,chr4	+,-,+	TBC1D14,CCDC96,TBC1D14	-1497,131945,-1173
chr12:366908-367706	chr12	+	367008	367658	True	NM_016615,NM_001190997,NM_001130147,NR_034028	chr12,chr12,chr12,chr12	-,-,+,-	SLC6A13,SLC6A13,CCDC77,SLC6A13	4433,4433,130857,4433
chr19:14585189-14585979	chr19	+	14585207	14585975	True	NM_000955,NM_001146693	chr19,chr19	-,+	PTGER1,LOC100130932	249,13782
chr6:143800732-143802071	chr6	+	143800732	143801824	True	NM_182503,NM_003630	chr6,chr6	-,+	ADAT2,PEX3	-28891,-28876
chr2:220041985-220042672	chr2	+	220042091	220042568	True	NM_024293,NM_015680,NM_001144890,NM_144712,NM_001144889	chr2,chr2,chr2,chr2,chr2	+,-,-,-,-	FAM134A,CNPPD1,SLC23A3,SLC23A3,SLC23A3	370,-389,-7274,-7274,-7274
chr4:46995819-46996055	chr4	+	46995897	46996097	True	NM_000809,NM_000812,NM_001204267,NM_001204266	chr4,chr4,chr4,chr4	-,+,-,-	GABRA4,GABRB1,GABRA4,GABRA4	377,37197,-375,-375
chr16:16042471-16042785	chr16	+	16042642	16042818	True	NM_019900,NM_144600,NM_004996,NM_019862,NM_019898,NM_019899	chr16,chr16,chr16,chr16,chr16,chr16	+,-,+,+,+,+	ABCC1,FOPNL,ABCC1,ABCC1,ABCC1,ABCC1	615,-60195,615,615,615,615
chr9:131217755-131217963	chr9	+	131217868	131218012	True	NR_029837,NM_153439,NM_153435,NM_153437,NM_153436,NM_153433,NM_153432,NM_153440,NR_036757,NR_036756,NR_036755,NR_036754	chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,+,+,+,+,+,+,+,+,+,+,+	MIR219-2,ODF2,ODF2,ODF2,ODF2,ODF2,ODF2,ODF2,ODF2,ODF2,ODF2,ODF2	-62875,272,272,1173,-485,666,272,666,272,272,272,272
chr7:4816220-4817177	chr7	+	4816572	4816958	True	NM_020144,NM_014855	chr7,chr7	-,+	PAPOLB,KIAA0415	84719,-1361
chr19:3574509-3574807	chr19	+	3574513	3574718	True	NM_174983,NM_006339	chr19,chr19	-,+	C19orf28,HMG20B	-16942,-1621
chr17:74534441-74534652	chr17	+	74534440	74534688	True	NM_134268,NM_001077620	chr17,chr17	-,+	CYGB,PRCD	-658,1432
chr5:147273264-147274344	chr5	+	147273514	147274296	True	NM_054023,NM_206966	chr5,chr5	+,-	SCGB3A2,C5orf46	-15298,11870
chr1:25291548-25292016	chr1	+	25291662	25291988	True	NM_013943,NM_001031680	chr1,chr1	+,-	CLIC4,RUNX3	-219953,-161
chrX:14929798-14931525	chrX	+	14930149	14931455	True	NM_152633,NM_001177475	chrX,chrX	-,+	FANCB,MOSPD2	-38965,-26795
chr1:17247655-17248392	chr1	+	17247659	17248083	True	NM_014675,NM_001135248	chr1,chr1	+,-	CROCC,MFAP2	361,59140
chr9:136326999-136328174	chr9	+	136327053	136328211	True	NM_017586,NM_001145099,NM_001135775	chr9,chr9,chr9	+,-,+	C9orf7,SLC2A6,C9orf7	-2017,16115,-2017
chr3:167375503-167377215	chr3	+	167375600	167377062	True	NM_178824,NM_001122752	chr3,chr3	-,+	WDR49,SERPINI1	-4311,76369
chr6:84742081-84742996	chr6	+	84742352	84742962	True	NM_014895,NM_138409	chr6,chr6	-,+	KIAA1009,MRAP2	194423,457
chr12:49363772-49364050	chr12	+	49363915	49364095	True	NM_003394,NM_005430	chr12,chr12	-,+	WNT10B,WNT1	1596,8140
chr3:113957553-113958215	chr3	+	113957718	113958229	True	NM_007136,NM_173799	chr3,chr3	-,+	ZNF80,TIGIT	-1293,54603
chr9:130565868-130566600	chr9	+	130566008	130566610	True	NM_001018078,NM_170600,NM_004957	chr9,chr9,chr9	+,-,+	FPGS,SH2D3C,FPGS	-551,-24960,-905
chr11:506179-506427	chr11	+	506178	506246	True	NM_002939,NM_198075,NM_203389,NM_203388,NM_203387,NM_203386,NM_203385,NM_203384,NM_203383	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,+,-,-,-,-,-,-,-	RNH1,LRRC56,RNH1,RNH1,RNH1,RNH1,RNH1,RNH1,RNH1	625,31275,1077,1077,1077,1077,625,625,625
chr20:33464783-33465476	chr20	+	33464845	33465317	True	NM_178026,NR_028046,NM_018677,NM_001076552	chr20,chr20,chr20,chr20	-,+,+,+	GGT7,ACSS2,ACSS2,ACSS2	-4184,-2130,-568,-568
chr20:56964781-56965705	chr20	+	56964821	56965741	True	NM_004738,NR_003505,NR_036633,NM_001195677	chr20,chr20,chr20,chr20	+,-,+,+	VAPB,PPP4R1L,VAPB,VAPB	-697,-80326,-697,-697
chr2:38980794-38981061	chr2	+	38980906	38981073	True	NM_001031684,NM_001195446,NM_024775	chr2,chr2,chr2	-,-,+	SRSF7,SRSF7,GEMIN6	-2270,-2270,24253
chr16:28519332-28519564	chr16	+	28519408	28519472	True	NM_018690,NM_145659	chr16,chr16	+,-	APOBR,IL27	-13466,-1253
chr9:86135756-86137637	chr9	+	86136108	86137266	True	NM_174938,NM_001001551	chr9,chr9	-,+	FRMD3,C9orf103	16132,100766
chr22:27282915-27283379	chr22	+	27283010	27283378	True	NR_033321,NM_001887	chr22,chr22	+,-	MIAT,CRYBB1	-229615,-269019
chr18:32311365-32312880	chr18	+	32311550	32312562	True	NM_032978,NM_003787	chr18,chr18	+,-	DTNA,NOL4	-21418,-508035
chr5:33441746-33442732	chr5	+	33441835	33442353	True	NM_152295,NM_030955	chr5,chr5	+,-	TARS,ADAMTS12	-989,449833
chr1:180168270-180169567	chr1	+	180168428	180169453	True	NR_037642,NR_026900	chr1,chr1	-,+	LOC100527964,FLJ23867	74413,-1335
chr16:46723314-46723516	chr16	+	46723390	46723514	True	NM_014321,NR_037620,NM_018206	chr16,chr16,chr16	+,+,-	ORC6,ORC6,VPS35	43,43,-246
chr4:57460427-57461704	chr4	+	57460495	57461695	True	NM_001145459,NM_206919	chr4,chr4	-,+	HOPX,ARL9	61043,-89171
chr3:120313464-120314862	chr3	+	120313598	120314876	True	NM_004547,NM_001168331,NM_000187	chr3,chr3,chr3	+,+,-	NDUFB4,NDUFB4,HGD	251,251,86592
chr7:75570839-75572562	chr7	+	75570839	75572258	True	NM_031925,NR_002955	chr7,chr7	-,+	TMEM120A,SNORA14A	51789,842
chr10:696571-696907	chr10	+	696671	696761	True	NR_027152,NR_027151,NM_014974	chr10,chr10,chr10	+,+,-	C10orf108,C10orf108,DIP2C	-713,-842,38897
chrX:84258980-84260240	chrX	+	84258981	84259910	True	NM_001012980,NM_198450	chrX,chrX	-,+	SATL1,APOOL	104117,-134
chr11:58704337-58706061	chr11	+	58704365	58706069	True	NM_145016,NM_080661	chr11,chr11	-,+	GLYATL2,GLYATL1	-92368,4652
chr9:131684685-131685516	chr9	+	131684849	131685155	True	NM_174933,NM_001100877,NM_001100876,NM_014908	chr9,chr9,chr9,chr9	+,+,+,-	PHYHD1,PHYHD1,PHYHD1,DOLK	-1726,-338,-1726,24913
chr1:205290485-205290693	chr1	+	205290550	205290708	True	NM_014858,NM_030952	chr1,chr1	+,-	TMCC2,NUAK2	-93563,225
chr19:47734724-47735462	chr19	+	47734774	47735274	True	NM_001127241,NM_001127240,NM_001127242,NR_036159,NR_036158,NM_014417	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,+,-	BBC3,BBC3,BBC3,MIR3191,MIR3190,BBC3	799,799,799,-4498,-4626,-323
chr1:6551572-6552515	chr1	+	6551651	6552533	True	NM_001042665,NM_001042664,NM_020631,NM_138697,NM_001042663	chr1,chr1,chr1,chr1,chr1	-,-,-,+,-	PLEKHG5,PLEKHG5,PLEKHG5,TAS1R1,PLEKHG5	-5637,-1011,-49,62804,5001
chr1:169360808-169362750	chr1	+	169361287	169362363	True	NM_003666,NM_197972	chr1,chr1	+,-	BLZF1,NME7	-24144,-24101
chr6:150242693-150243771	chr6	+	150242750	150243656	True	NM_025217,NM_001001788	chr6,chr6	+,-	ULBP2,RAET1G	19479,608
chr1:11739887-11740211	chr1	+	11739947	11740047	True	NM_198545,NM_006341	chr1,chr1	+,-	C1orf187,MAD2L2	11733,1274
chrX:131266491-131266891	chrX	+	131266750	131266817	True	NM_001042452,NM_194277	chrX,chrX	+,-	MST4,FRMD7	-109172,-4700
chr10:102135568-102136568	chr10	+	102136034	102136476	True	NM_016112,NR_026762	chr10,chr10	-,+	PKD2L1,NCRNA00263	-45791,-2752
chr7:37025491-37026840	chr7	+	37025499	37026788	True	NM_001039459,NM_130442,NM_018685	chr7,chr7,chr7	-,-,+	ELMO1,ELMO1,ANLN	-834,100,-596118
chr15:24414472-24414818	chr15	+	24414493	24414723	True	NR_026646,NR_026647	chr15,chr15	+,-	PWRN1,PWRN2	388580,380
chr15:24414472-24414818	chr15	+	24489533	24489609	False	NR_026646,NR_026647	chr15,chr15	+,-	PWRN1,PWRN2	313694,-74480
chr15:24414472-24414818	chr15	+	24630036	24630112	False	NR_026646,NR_026647	chr15,chr15	+,-	PWRN1,PWRN2	173191,-214983
chr15:25466535-25467028	chr15	+	25466589	25467009	True	NR_003315,NR_003303,NR_003495,NR_003496,NR_003497,NR_003346,NR_022010,NR_003344,NR_003345,NR_003351,NR_003347,NM_130838,NR_003342,NR_003343,NR_003358,NR_003348	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,+,+,-,+,+,+,+	SNORD115-23,SNORD115-11,SNORD115-24,HBII-52-27,HBII-52-28,SNORD115-31,PAR4,SNORD115-29,SNORD115-30,SNORD115-36,SNORD115-32,UBE3A,SNORD115-25,SNORD115-26,SNORD115-43,SNORD115-33	-9697,1383,-7834,-990,491,5246,-9801,1383,3340,1383,7104,183694,-5952,-2876,1383,8975
chr16:29574562-29575542	chr16	+	29575048	29575118	True	NM_001030288,NR_002473	chr16,chr16	+,-	SPN,LOC440354	99181,2478
chr16:29574562-29575542	chr16	+	18905720	18905802	False	NM_015092,NM_024847	chr16,chr16	-,+	SMG1,TMC7	31992,89453
chr16:29574562-29575542	chr16	+	30314752	30314822	False	NM_013292,NR_002473	chr16,chr16	+,-	MYLPF,LOC440354	71300,2478
chr7:90005260-90006838	chr7	+	90005694	90006874	True	NM_006980,NM_001185072	chr7,chr7	-,+	MTERF,CLDN12	1503204,25773
chr3:10323588-10324000	chr3	+	10323702	10324011	True	NM_001134941,NR_026829,NR_004431,NM_016362,NR_024145,NR_024144,NR_024146	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,+,-,+,+,+	GHRL,C3orf42,GHRLOS,GHRL,GHRLOS,GHRLOS,GHRLOS	8464,2091,3426,8464,3426,3426,3426
chr7:151108929-151109860	chr7	+	151109035	151109769	True	NR_034012,NR_034013,NM_198285	chr7,chr7,chr7	+,+,-	LOC100131176,LOC100131176,WDR86	-2764,-2764,-1911
chr13:102558032-102558997	chr13	+	102558073	102558998	True	NM_004115,NM_004791	chr13,chr13	-,+	FGF14,ITGBL1	10048,-453158
chr16:70680655-70680855	chr16	+	70680686	70680764	True	NM_001172772,NM_138383	chr16,chr16	+,-	IL34,MTSS1L	-22842,39240
chr3:101405096-101405359	chr3	+	101405149	101405325	True	NM_014415,NR_024407,NM_000986	chr3,chr3,chr3	-,+,-	ZBTB11,LOC100009676,RPL24	-9161,-9926,288
chr14:106939569-106940349	chr14	+	106939649	106940389	True	NR_002224	chr14	-	ADAM6	-501291
chr4:38879305-38880764	chr4	+	38879624	38880508	True	NM_006068,NR_030300	chr4,chr4	-,+	TLR6,MIR574	-21186,-10032
chr2:130733890-130735487	chr2	+	130734482	130734821	True	NR_036537,NM_032144	chr2,chr2	-,+	LOC100131320,RAB6C	3281,2413
chr20:37591112-37591459	chr20	+	37591267	37591503	True	NM_001190809,NR_033905,NR_027124,NM_021931	chr20,chr20,chr20,chr20	+,+,-,+	DHX35,DHX35,LOC339568,DHX35	-337,-337,261938,-337
chr21:35020873-35022042	chr21	+	35021231	35022048	True	NM_003024,NM_145858,NM_001001132	chr21,chr21,chr21	+,-,+	ITSN1,CRYZL1,ITSN1	-6507,-7071,-6507
chr22:28690647-28691429	chr22	+	28690869	28691431	True	NR_036169,NR_036170	chr22,chr22	-,+	MIR3199-1,MIR3199-2	-374269,-374416
chr1:246980555-246982048	chr1	+	246980632	246981132	True	NR_015422,NM_015446	chr1,chr1	+,-	LOC149134,AHCTF1	-27771,113644
chr22:37311257-37312755	chr22	+	37311583	37312588	True	NM_000395,NM_001163857	chr22,chr22	+,-	CSF2RB,C22orf33	-1970,91350
chr12:52833084-52834246	chr12	+	52833166	52834074	True	NM_004693,NM_002284	chr12,chr12	-,+	KRT75,KRT86	-5056,-137568
chr16:4674403-4674640	chr16	+	4674520	4674676	True	NM_001142289,NM_001142291,NM_001142290,NM_015246,NM_145253	chr16,chr16,chr16,chr16,chr16	+,+,+,+,-	MGRN1,MGRN1,MGRN1,MGRN1,FAM100A	149,149,149,149,-9593
chr18:75703915-75704535	chr18	+	75704158	75704550	True	NM_001480,NM_001025100	chr18,chr18	+,-	GALR1,MBP	-742207,-859384
chr3:5162779-5163902	chr3	+	5162939	5163723	True	NR_037903,NM_018184	chr3,chr3	-,+	LOC100507582,ARL8B	-214753,206
chr17:25799016-25799445	chr17	+	25799094	25799442	True	NM_014238,NM_000625	chr17,chr17	+,-	KSR1,NOS2	-109,328163
chr1:205410330-205410560	chr1	+	205410341	205410593	True	NM_002596,NR_029893	chr1,chr1	+,-	CDK18,MIR135B	63090,6983
chr6:126076631-126077635	chr6	+	126076638	126077388	True	NM_016063,NM_012259	chr6,chr6	-,+	HDDC2,HEY2	-453356,-5957
chr2:216174340-216175679	chr2	+	216174408	216175608	True	NM_002026,NM_004044	chr2,chr2	-,+	FN1,ATIC	125241,1070
chr7:155251916-155252146	chr7	+	155251960	155252190	True	NM_001103176,NM_001427	chr7,chr7	-,+	CNPY1,EN2	74399,-1187
chr12:133258872-133259393	chr12	+	133259135	133259238	True	NM_018663,NM_006231	chr12,chr12	+,-	PXMP2,POLE	4953,4772
chr17:18545996-18546758	chr17	+	18546065	18546701	True	NM_001037330,NM_001039397	chr17,chr17	+,-	TRIM16L,TBC1D28	78700,1089
chr17:18545996-18546758	chr17	-	15636685	15636929	False	NM_006470,NM_178571	chr17,chr17	-,+	TRIM16,TBC1D26	-50492,-1145
chr20:52792623-52793128	chr20	+	52792785	52793167	True	NM_002623,NM_001128915,NM_000782	chr20,chr20,chr20	+,-,-	PFDN4,CYP24A1,CYP24A1	31334,-2269,-2269
chr2:27272194-27272502	chr2	+	27272330	27272460	True	NM_001035507,NM_021831,NM_001134693	chr2,chr2,chr2	+,+,-	AGBL5,AGBL5,OST4	2030,2030,22157
chr4:79702966-79704814	chr4	+	79702983	79704555	True	NM_198892,NM_017593,NM_001040202	chr4,chr4,chr4	+,+,-	BMP2K,BMP2K,PAQR3	-5502,-5502,156085
chr1:228003500-228003964	chr1	+	228003505	228003957	True	NM_183062,NM_023007	chr1,chr1	+,-	PRSS38,JMJD4	-138,-80393
chr16:1431543-1431798	chr16	+	1431705	1431809	True	NM_032520,NM_001193389,NM_023076	chr16,chr16,chr16	+,-,-	GNPTG,UNKL,UNKL	-29856,-2021,-2021
chr7:148286158-148288118	chr7	+	148286166	148287885	True	NM_145304,NM_001203249	chr7,chr7	+,-	C7orf33,EZH2	-94,292767
chr17:79321416-79322640	chr17	+	79321468	79322662	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	50877,-16994
chr6:108580729-108581531	chr6	+	108580729	108581509	True	NM_145315,NM_152827,NM_003795	chr6,chr6,chr6	+,-,-	LACE1,SNX3,SNX3	34588,1005,1005
chr21:15219574-15221297	chr18	-	14337933	14337983	True	NR_024076,NR_026756	chr18,chr18	-,+	CXADRP3,LOC284233	160772,-562
chr11:60072578-60073973	chr11	+	60072903	60074014	True	NM_022349,NM_024021	chr11,chr11	-,+	MS4A6A,MS4A4A	-122229,-22868
chr19:44810542-44811144	chr19	+	44810581	44811187	True	NM_004234,NM_181756	chr19,chr19	-,+	ZNF235,ZNF233	-1403,-46556
chr7:155449972-155451386	chr7	+	155450004	155451073	True	NM_001103176,NM_053043	chr7,chr7	-,+	CNPY1,RBM33	-123465,-12858
chr12:49687286-49687611	chr12	+	49687303	49687645	True	NM_001008223,NM_006262	chr12,chr12	-,+	C1QL4,PRPH	43376,1263
chr1:113040720-113041682	chr1	+	113041177	113041515	True	NR_036210,NM_024494	chr1,chr1	-,+	MIR4256,WNT2B	-36722,9854
chr19:13883031-13883362	chr19	+	13883087	13883307	True	NM_032285,NR_036515,NM_014047,NM_001031727	chr19,chr19,chr19,chr19	+,-,+,+	MRI1,LOC284454,C19orf53,MRI1	-7801,63846,1949,-7801
chr4:178226370-178227620	chr4	+	178226778	178227398	True	NM_000027,NM_018248	chr4,chr4	-,+	AGA,NEIL3	136317,3592
chr2:237416089-237416325	chr2	+	237416126	237416220	True	NM_020311,NM_024726	chr2,chr2	+,-	CXCR7,IQCA1	62159,-34
chr3:58296579-58298077	chr3	+	58296812	58297963	True	NM_007042,NM_004944,NM_001098783	chr3,chr3,chr3	+,-,+	RPP14,DNASE1L3,RPP14	-4899,-96414,-4901
chr17:21188427-21188976	chr17	+	21188544	21189018	True	NM_152914,NM_145109,NM_002756	chr17,chr17,chr17	-,+,+	C17orf103,MAP2K3,MAP2K3	-31966,-627,2329
chr11:60527463-60527993	chr11	+	60527624	60527989	True	NM_152717,NM_001098835,NM_004778	chr11,chr11,chr11	+,+,-	MS4A15,MS4A15,GPR44	-3335,-3335,95514
chr8:37387865-37388809	chr8	+	37387870	37388732	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	164568,216882
chr5:74633660-74635128	chr5	+	74633677	74635019	True	NM_000859,NM_001130996,NM_001164443	chr5,chr5,chr5	+,+,-	HMGCR,HMGCR,ANKRD31	-735,-735,-100974
chr10:118031891-118032177	chr10	+	118031962	118032110	True	NM_145793,NM_005264,NM_198515,NM_001145453	chr10,chr10,chr10,chr10	-,-,+,-	GFRA1,GFRA1,C10orf96,GFRA1	-143,1066,51829,736
chr10:75528650-75530543	chr10	+	75528843	75530567	True	NR_026592,NM_173540	chr10,chr10	-,+	BMS1P4,FUT11	-38571,1481
chr14:21232387-21233864	chr14	+	21232537	21233417	True	NM_198232,NM_022360	chr14,chr14	-,+	RNASE1,EDDM3B	37191,3168
chr12:64801120-64802727	chr12	+	64801336	64802246	True	NM_001170633,NM_007235	chr12,chr12	-,+	C12orf56,XPOT	-16991,-3242
chr2:27373028-27374293	chr2	+	27373225	27374181	True	NM_178553,NM_175769	chr2,chr2	-,+	C2orf53,TCF23	-10893,-1331
chr19:10827781-10828713	chr19	+	10827914	10828657	True	NM_001005361,NM_001005360,NM_001005362,NM_004945,NR_030368,NR_024333,NM_001190716	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,-,+	DNM2,DNM2,DNM2,DNM2,MIR638,LOC147727,DNM2	71,71,71,71,422,-63366,71
chr5:1225326-1225610	chr5	+	1225337	1225541	True	NM_182632,NM_001193376	chr5,chr5	+,-	SLC6A18,TERT	8,69671
chr20:38726391-38727109	chr20	+	38726535	38726586	True	NM_003286,NM_005461	chr20,chr20	+,-	TOP1,MAFB	930875,591341
chr19:10563285-10563804	chr19	+	10563310	10563447	True	NM_006202,NM_007065	chr19,chr19	+,-	PDE4A,CDC37	185,-49039
chr14:63678523-63679567	chr14	+	63678522	63679604	True	NM_145171,NM_020663	chr14,chr14	-,+	GPHB5,RHOJ	105009,-7429
chr16:28251000-28251854	chr16	+	28251139	28251898	True	NM_015171,NM_001024401	chr16,chr16	-,+	XPO6,SBK1	-27949,51941
chr11:5620926-5621444	chr11	+	5620974	5621419	True	NM_001003819,NM_001003818,NM_001005289,NM_001198645,NM_001198644,NM_058166	chr11,chr11,chr11,chr11,chr11,chr11	+,+,-,+,+,+	TRIM6-TRIM34,TRIM6,OR52H1,TRIM6,TRIM6,TRIM6	-3173,-3173,-54221,-3173,-3173,-3707
chr16:1281551-1281819	chr16	+	1281559	1281619	True	NM_012467,NM_024164,NM_003294	chr16,chr16,chr16	-,-,+	TPSG1,TPSB2,TPSAB1	-6305,-1374,9058
chr16:1281551-1281819	chr16	-	1289765	1289825	False	NM_024164,NM_003294	chr16,chr16	-,+	TPSB2,TPSAB1	-9580,852
chr1:3670858-3671196	chr1	+	3670870	3671236	True	NR_033709,NR_033708,NR_033710,NR_033711,NR_033712,NM_152492	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,+	KIAA0495,KIAA0495,KIAA0495,KIAA0495,KIAA0495,CCDC27	-6933,-6933,-6933,-6933,-7535,-1956
chr17:26693144-26694126	chr17	+	26693690	26694062	True	NM_015584,NM_001080837,NM_000638,NM_152464,NM_015077	chr17,chr17,chr17,chr17,chr17	-,-,-,+,+	POLDIP2,SEBOX,VTN,TMEM199,SARM1	-9087,-1425,3361,-9054,4924
chr8:42911869-42912087	chr8	+	42911947	42912049	True	NR_027669,NR_033698,NM_002027	chr8,chr8,chr8	-,+,+	RNF170,FNTA,FNTA	-160081,-556,-556
chr9:37754404-37755123	chr9	+	37754411	37754951	True	NM_016042,NM_144964	chr9,chr9	-,+	EXOSC3,RG9MTD3	30164,-661
chr22:31554698-31555668	chr22	+	31554725	31555685	True	NR_024209,NR_037496,NM_001135825,NR_024211,NR_024210,NR_024212,NM_152267	chr22,chr22,chr22,chr22,chr22,chr22,chr22	+,-,+,+,+,+,+	RNF185,MIR3928,RNF185,RNF185,RNF185,RNF185,RNF185	452,476,452,452,452,452,452
chr8:125984574-125984971	chr8	+	125984707	125984975	True	NM_014846,NM_152412	chr8,chr8	-,+	KIAA0196,ZNF572	119136,563
chr10:75104193-75106157	chr10	+	75104285	75106140	True	NM_173348,NM_145170	chr10,chr10	+,-	FAM149B1,TTC18	-176459,12527
chr2:120317721-120318053	chr2	+	120317746	120318022	True	NM_001029996,NM_002980	chr2,chr2	+,-	PCDP1,SCTR	-15772,-35718
chr12:131646325-131647895	chr12	+	131646515	131647745	True	NR_026670,NM_194356	chr12,chr12	+,-	LOC116437,STX2	1810,-322704
chr8:11033685-11035111	chr8	+	11033692	11035102	True	NM_173683,NM_015458	chr8,chr8	-,+	XKR6,MTMR9	23830,106897
chr14:95634718-95635961	chr14	+	95634739	95635532	True	NR_015415,NM_177438	chr14,chr14	+,-	FLJ45244,DICER1	-10776,-10980
chr2:238969863-238970101	chr2	+	238969902	238969970	True	NM_016510,NM_030768	chr2,chr2	+,-	SCLY,ILKAP	-388,142404
chr3:121805112-121806138	chr3	+	121805280	121806119	True	NM_006889,NM_001199799	chr3,chr3	+,-	CD86,ILDR1	-8581,-64153
chr3:119923298-119924341	chr3	+	119923381	119924289	True	NM_001168271,NM_001168331	chr3,chr3	-,+	GPR156,NDUFB4	38903,390838
chr9:139747452-139748343	chr9	+	139747452	139748276	True	NM_003792,NM_014172,NM_206920,NM_001080482,NM_001135861	chr9,chr9,chr9,chr9,chr9	-,+,+,+,+	EDF1,PHPT1,MAMDC4,C9orf172,PHPT1	12512,-4247,-684,-8636,-4247
chr5:83017028-83017842	chr5	+	83017148	83017741	True	NM_001884,NM_004385	chr5,chr5	-,+	HAPLN1,VCAN	-252,-249706
chr19:57968439-57968753	chr19	+	57968609	57968801	True	NM_020633,NM_001023561	chr19,chr19	-,+	VN1R1,ZNF749	-502,-21976
chr2:36939481-36939701	chr2	+	36939500	36939625	True	NM_053276,NM_005102	chr2,chr2	+,-	VIT,FEZ2	-15725,-114168
chrX:110038434-110038890	chrX	+	110038444	110038922	True	NM_001128166,NM_145234,NM_001143981,NM_001143982,NM_001143983	chrX,chrX,chrX,chrX,chrX	+,-,-,-,-	PAK3,CHRDL1,CHRDL1,CHRDL1,CHRDL1	148590,204,414,414,414
chr11:7695677-7697013	chr11	+	7695691	7697029	True	NM_003621,NM_016229	chr11,chr11	+,-	PPFIBP2,CYB5R2	-160741,-870
chr7:23525044-23525761	chr7	+	23525385	23525717	True	NM_006547,NR_026676	chr7,chr7	-,+	IGF2BP3,RPS2P32	-15390,4289
chr12:113841183-113841525	chr12	+	113841503	113841563	True	NM_138432,NM_006843	chr12,chr12	+,-	SDSL,SDS	18652,179
chr17:3600031-3600354	chr17	+	3600062	3600388	True	NM_031965,NM_002561,NM_175080,NR_037928,NM_001204520,NM_001204519	chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,-,-,-	GSG2,P2RX5,P2RX5,P2RX5-TAX1BP3,P2RX5,P2RX5	26808,-364,-364,-364,-364,-364
chr6:32076104-32076669	chr6_mcf_hap5	+	3456093	3456521	False	NM_138717,NM_019105	chr6_mcf_hap5,chr6_mcf_hap5	+,-	PPT2,TNXB	44530,508
chr6:32076104-32076669	chr6_dbb_hap3	+	3355439	3355867	False	NM_138717,NM_019105	chr6_dbb_hap3,chr6_dbb_hap3	+,-	PPT2,TNXB	44534,508
chr6:32076104-32076669	chr6	+	32076265	32076693	True	NM_138717,NM_019105	chr6,chr6	+,-	PPT2,TNXB	44535,508
chr6:32076104-32076669	chr6_cox_hap2	+	3546927	3547355	False	NM_138717,NM_019105	chr6_cox_hap2,chr6_cox_hap2	+,-	PPT2,TNXB	44541,508
chr10:85955051-85955446	chr10	+	85955148	85955388	True	NM_033100,NM_001171971,NM_001017924	chr10,chr10,chr10	+,+,-	CDHR1,CDHR1,LRIT2	-787,-787,29946
chr1:151033977-151035490	chr1	+	151034340	151035454	True	NM_001038707,NM_144618,NM_006818,NM_020239	chr1,chr1,chr1,chr1	-,+,+,-	CDC42SE1,GABPB2,MLLT11,CDC42SE1	-2215,7625,-2250,-2215
chr2:113400839-113401496	chr2	+	113400939	113401507	True	NR_033871,NM_005415	chr2,chr2	-,+	FLJ42351,SLC20A1	300,1926
chrX:23796427-23797735	chrX	+	23797082	23797340	True	NM_001037171,NM_002970,NR_027783	chrX,chrX,chrX	-,+,+	ACOT9,SAT1,SAT1	-35675,3934,3934
chr20:31352448-31352847	chr20	+	31352462	31352854	True	NM_006892,NM_175848,NM_175849,NM_053041	chr20,chr20,chr20,chr20	+,+,+,-	DNMT3B,DNMT3B,DNMT3B,COMMD7	-2324,-2324,-2324,-20648
chr7:16626169-16626393	chr7	+	16626351	16626415	True	NM_020319,NM_001159767	chr7,chr7	-,+	ANKMY2,BZW2	59077,59343
chr16:48396304-48396564	chr16	+	48396304	48396617	True	NM_001006610,NM_031490	chr16,chr16	-,+	SIAH1,LONP2	3224,-118148
chr15:88800608-88800838	chr15	+	88800613	88800787	True	NM_002530,NM_001012338,NM_022839,NM_001007156	chr15,chr15,chr15,chr15	-,-,+,-	NTRK3,NTRK3,MRPS11,NTRK3	-952,-952,209896,-952
chr6:66013004-66014634	chr6	+	66013269	66014617	True	NR_026540,NM_198283	chr6,chr6	+,-	MCART3P,EYS	483154,275130
chr6:66013004-66014634	chr1	-	219783420	219784415	False	NM_138794,NM_018713	chr1,chr1	+,-	LYPLAL1,SLC30A10	-436280,317628
chr19:5621523-5621747	chr19	+	5621655	5621750	True	NM_001201338,NM_001201339,NR_037699,NM_002967,NM_014649,NM_001201340	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,-,+	SAFB,SAFB,SAFB,SAFB,SAFB2,SAFB	1295,1295,1295,1295,1239,1295
chr11:59386440-59387558	chr11	+	59386449	59387391	True	NM_001004711,NM_002556	chr11,chr11	+,-	OR4D9,OSBP	-104114,-2832
chr11:7958912-7960517	chr11	+	7959309	7960521	True	NM_001003745,NM_003754,NM_001004461	chr11,chr11,chr11	-,+,-	OR10A3,EIF3F,OR10A6	596,48345,-9100
chr1:204907978-204909300	chr1	+	204908032	204909305	True	NM_203376,NM_001160331	chr1,chr1	-,+	TMEM81,NFASC	144334,4048
chr16:10913351-10914029	chr16	+	10913410	10913944	True	NM_000246,NM_001079512	chr16,chr16	+,-	CIITA,FAM18A	57110,-789
chr19:54312707-54313466	chr19	+	54312969	54313421	True	NM_033297,NR_029866	chr19,chr19	-,+	NLRP12,MIR373	-1010,-21061
chr4:186354474-186354775	chr4	+	186354585	186354779	True	NR_028085,NM_001114357,NM_018359	chr4,chr4,chr4	-,+,-	UFSP2,C4orf47,UFSP2	-7446,-4102,-7446
chr6:78489816-78491667	chr6	+	78490000	78491678	True	NM_000863,NM_001010844	chr6,chr6	-,+	HTR1B,IRAK1BP1	-316880,1085510
chr5:52285283-52285792	chr5	+	52285425	52285827	True	NM_002203,NM_004531	chr5,chr5	+,-	ITGA2,MOCS2	-320,119548
chr2:220032355-220032925	chr2	+	220032586	220032968	True	NM_015680,NM_024782,NM_001144890,NM_144712,NM_001144889,NM_024293	chr2,chr2,chr2,chr2,chr2,chr2	-,-,-,-,-,+	CNPPD1,NHEJ1,SLC23A3,SLC23A3,SLC23A3,FAM134A	8784,-6999,1899,1899,1899,9970
chr3:10206256-10206468	chr3	+	10206263	10206377	True	NM_001570,NM_001164839	chr3,chr3	+,-	IRAK2,C3orf24	185,-56348
chr7:97881882-97882135	chr7	+	97881914	97882088	True	NM_015395,NM_015379	chr7,chr7	-,+	TECPR1,BRI3	-446,28890
chr14:24683913-24684382	chr14	+	24683918	24683999	True	NM_174944,NM_001199821,NM_001199822,NM_014169,NM_001184739,NM_138476	chr14,chr14,chr14,chr14,chr14,chr14	+,-,-,-,+,-	TSSK4,MDP1,MDP1,CHMP4A,TSSK4,MDP1	-9043,1330,1330,-882,-9043,1330
chr6:26539656-26540584	chr6	+	26539936	26540474	True	NM_006353,NM_024639	chr6,chr6	+,-	HMGN4,ZNF322A	-1417,119539
chr22:41139167-41139534	chr22	+	41139169	41139449	True	NM_006358,NM_005297	chr22,chr22	-,+	SLC25A17,MCHR1	75998,-64038
chr11:65221952-65222747	chr11	+	65221987	65222591	True	NR_030343,NM_182556	chr11,chr11	+,-	MIR612,SLC25A45	-10122,-71845
chrX:100129623-100130115	chrX	+	100129628	100130101	True	NM_001325,NM_013955,NM_007052	chrX,chrX,chrX	+,-,-	CSTF2,NOX1,NOX1	-54331,-294,-294
chr18:61311707-61312316	chr18	+	61311707	61312303	True	NM_012397,NM_002974	chr18,chr18	+,-	SERPINB13,SERPINB4	-57234,-205
chr18:61311707-61312316	chr18	+	61329344	61329852	False	NM_080475,NM_006919	chr18,chr18	+,-	SERPINB11,SERPINB3	40341,-147
chr3:46619221-46619924	chr3	+	46619391	46619849	True	NM_003212,NM_024512,NM_001174136	chr3,chr3,chr3	+,-,+	TDGF1,LRRC2,TDGF1	-366,-11380,-3397
chr6:2972054-2972378	chr6	+	2972087	2972177	True	NR_026855,NM_001195291,NM_004568	chr6,chr6,chr6	+,-,-	DKFZP686I15217,SERPINB6,SERPINB6	16023,272,272
chr20:34197788-34198096	chr20	+	34197849	34198018	True	NR_024377,NM_003116	chr20,chr20	-,+	FER1L4,SPAG4	-2365,5790
chr8:496302-496506	chr8	+	496415	496555	True	NM_175075,NM_183421	chr8,chr8	-,+	C8orf42,FBXO25	-1084,-139659
chr6:108323804-108324677	chr6	+	108323892	108324458	True	NM_007214,NM_003269	chr6,chr6	-,+	SEC63,NR2E1	-44410,162756
chr3:44523557-44525458	chr3	+	44523683	44524983	True	NM_018651,NM_181489	chr3,chr3	+,-	ZNF167,ZNF445	71729,-4521
chr7:72568189-72568554	chr7	+	72568287	72568545	True	NR_002206,NR_003664,NR_003580	chr7,chr7,chr7	+,-,+	GTF2IP1,SPDYE8P,LOC100093631	480,-67978,466
chr7:72568189-72568554	chr7	+	74378697	74378777	False	NM_001025202,NM_001145063	chr7,chr7	-,+	STAG3L2,GATSL1	-71966,305
chr7:72568189-72568554	chr7	-	74868182	74868370	False	NM_001145064,NR_003664	chr7,chr7	-,+	GATSL2,SPDYE8P	-841,68162
chr7:72568189-72568554	chr7	-	74653925	74654183	False	NR_002206,NM_001003795,NR_003580	chr7,chr7,chr7	-,+,-	GTF2IP1,GTF2IRD2B,LOC100093631	-480,-145629,-466
chr8:29885552-29887048	chr8	+	29885627	29887063	True	NM_016127,NM_015344	chr8,chr8	-,+	TMEM66,LEPROTL1	53636,65858
chr15:28626826-28627728	chr15	+	28627149	28627340	True	NM_004667,NR_033351,NR_033353	chr15,chr15,chr15	-,+,+	HERC2,GOLGA8F,GOLGA8G	-59854,-3416,-3416
chr15:28626826-28627728	chr15	-	28774586	28774777	False	NR_036443,NR_033351,NR_033353	chr15,chr15,chr15	+,-,-	HERC2P9,GOLGA8F,GOLGA8G	124810,3416,3416
chr15:28626826-28627728	chr15	+	20771170	20771231	False	NM_001145004,NR_027411	chr15,chr15	-,+	GOLGA6L6,GOLGA8C	-24056,-3554
chr15:28626826-28627728	chr15	-	22712168	22712229	False	NR_027407,NM_001001413	chr15,chr15	-,+	GOLGA8DP,GOLGA6L1	3556,24016
chr15:28626826-28627728	chr15	+	23438568	23438629	False	NR_002824,NR_033350	chr15,chr15	-,+	HERC2P2,GOLGA8E	-60309,-3556
chr22:26826073-26826273	chr22	+	26826170	26826318	True	NM_152841,NM_020437	chr22,chr22	-,+	HPS4,ASPHD2	49283,-941
chr12:48152036-48152426	chr12	+	48152071	48152387	True	NM_001098532,NM_001098531,NM_006105,NM_017842	chr12,chr12,chr12,chr12	-,-,-,+	RAPGEF3,RAPGEF3,RAPGEF3,SLC48A1	12,552,75,14579
chr14:55221342-55221805	chr14	+	55221365	55221839	True	NR_036194,NM_001161577	chr14,chr14	-,+	MIR4308,SAMD4A	123122,25
chr17:28299744-28300543	chr17	+	28299860	28300382	True	NM_198529,NM_033389	chr17,chr17	+,-	EFCAB5,SSH2	-31288,-42842
chr8:30583253-30584201	chr8	+	30583427	30583961	True	NM_001195103,NM_001195102,NM_000637,NM_005671,NM_001195104	chr8,chr8,chr8,chr8,chr8	-,-,-,+,-	GSR,GSR,GSR,UBXN8,GSR	1575,1575,1575,17728,1575
chr10:93668219-93668437	chr10	+	93668282	93668470	True	NM_003972,NM_152429	chr10,chr10	+,-	BTAF1,FGFBP3	15265,838
chr20:25064207-25064489	chr20	+	25064271	25064455	True	NM_014588,NM_001114089,NM_199425	chr20,chr20,chr20	-,+,-	VSX1,ENTPD6,VSX1	-1504,111883,-1504
chr19:42747761-42748034	chr19	+	42747761	42747859	True	NM_019884,NM_133444	chr19,chr19	-,+	GSK3A,ZNF526	-1025,-23320
chr3:67697161-67698212	chr3	+	67697204	67698078	True	NM_001177599,NM_003848,NM_213609	chr3,chr3,chr3	-,-,+	SUCLG2,SUCLG2,FAM19A1	7010,7010,355375
chr19:55013658-55014079	chr19	+	55013766	55013963	True	NM_145057,NM_021270,NM_002288	chr19,chr19,chr19	-,+,+	CDC42EP5,LAIR2,LAIR2	-29344,49,49
chr16:48659605-48660803	chr16	+	48660495	48660563	True	NM_153029,NM_031490	chr16,chr16	-,+	N4BP1,LONP2	-16375,-382344
chr17:8079595-8079798	chr17	+	8079682	8079820	True	NM_032354,NM_183065,NR_037447	chr17,chr17,chr17	-,-,+	TMEM107,TMEM107,MIR3676	-16,-16,10672
chr19:16606292-16606685	chr19	+	16606461	16606726	True	NM_145046,NM_032207	chr19,chr19	-,+	CALR3,C19orf44	328,478
chr10:104008434-104010433	chr10	+	104008699	104009828	True	NM_001199378,NM_001199379,NM_005029,NM_004193	chr10,chr10,chr10,chr10	+,+,-,+	GBF1,GBF1,PITX3,GBF1	-3503,-3503,-7468,-3503
chr4:190860902-190861765	chr4	+	190860963	190861643	True	NM_004477,NM_020040	chr4,chr4	+,-	FRG1,TUBB4Q	330,44431
chr2:210881726-210882559	chr2	+	210881947	210882392	True	NM_152519,NM_199229	chr2,chr2	-,+	C2orf67,RPE	153709,-14631
chr9:36198152-36198393	chr9	+	36198310	36198402	True	NM_001190383,NM_001184761,NM_001184760,NM_007096,NM_001076677,NM_001184762,NM_001833	chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,+,+,+,+,+,+	GNE,CLTA,CLTA,CLTA,CLTA,CLTA,CLTA	60146,-7508,-7508,-7508,-7508,-7508,-7508
chr9:129579683-129579913	chr9	+	129579682	129579760	True	NM_014007,NM_012098	chr9,chr9	+,-	ZBTB43,ANGPTL2	-12448,305342
chr19:18715516-18716141	chr19	+	18715566	18716027	True	NM_012109,NM_004750	chr19,chr19	+,-	TMEM59L,CRLF1	7654,1683
chr20:57212352-57212765	chr20	+	57212362	57212626	True	NM_153360,NM_001001433	chr20,chr20	-,+	APCDD1L,STX16	-122413,13682
chr17:6984849-6985090	chr17	+	6984878	6985082	True	NM_182906,NM_006344,NM_201566	chr17,chr17,chr17	-,-,+	CLEC10A,CLEC10A,SLC16A13	-1278,-1278,-45539
chrX:16665684-16666079	chrX	+	16665683	16665890	True	NM_001144002,NM_004057	chrX,chrX	-,+	CTPS2,S100G	64511,2390
chr6:18265126-18265480	chr6	+	18265158	18265375	True	NM_001134709,NM_153042,NM_003472	chr6,chr6,chr6	-,+,-	DEK,KDM1B,DEK	-359,-109590,-359
chrX:49056884-49058068	chrX	+	49056974	49057849	True	NM_002668,NM_003179	chrX,chrX	+,-	PLP2,SYP	-28842,-313
chr1:151225797-151226095	chr1	+	151225992	151226142	True	NM_005997,NM_002810	chr1,chr1	-,+	VPS72,PSMD4	-63352,1054
chr11:48263948-48264250	chr11	+	48263951	48264245	True	NM_001004727,NM_001005513	chr11,chr11	+,-	OR4X2,OR4C45	2410,109804
chr2:10864483-10865779	chr2	+	10864591	10865585	True	NM_001039362,NM_144583,NM_024894	chr2,chr2,chr2	+,+,-	ATP6V1C2,ATP6V1C2,NOL10	-2867,-2867,-34479
chr14:24047186-24047416	chr14	+	24047225	24047465	True	NM_001146028,NR_023314,NM_032452,NM_003917	chr14,chr14,chr14,chr14	-,+,-,-	JPH4,THTPA,JPH4,AP1G2	594,-22078,594,-9946
chr1:63833694-63834262	chr1	+	63833698	63834164	True	NM_014288,NM_013339	chr1,chr1	-,+	ITGB3BP,ALG6	154721,-488
chr11:65429652-65430167	chr11	+	65429690	65429948	True	NM_021975,NM_153253,NM_001145138	chr11,chr11,chr11	-,+,-	RELA,SIPA1,RELA	545,-22149,545
chr2:202173090-202174351	chr2	+	202173206	202174236	True	NM_001127391,NM_033356	chr2,chr2	-,+	ALS2CR12,CASP8	47915,-48034
chr1:226960451-226961051	chr1	+	226960464	226961105	True	NM_002221,NM_000447	chr1,chr1	-,+	ITPKB,PSEN2	-33588,97167
chr11:6239330-6239949	chr11	+	6239413	6239985	True	NM_173525,NM_001098794	chr11,chr11	+,-	C11orf42,FAM160A2	-12666,16006
chr17:78388132-78388489	chr17	+	78388158	78388422	True	NM_001164637,NR_029376,NM_001164638,NM_173627	chr17,chr17,chr17,chr17	+,-,+,+	FLJ35220,LOC100294362,FLJ35220,FLJ35220	544,596,544,544
chr11:19224465-19226090	chr11	+	19224500	19224644	True	NM_001127656,NM_003476,NM_019028	chr11,chr11,chr11	-,-,+	CSRP3,CSRP3,ZDHHC13	-970,-911,-85866
chr7:129846851-129848793	chr7	+	129846895	129848672	True	NM_145268,NM_032842	chr7,chr7	+,-	C7orf45,TMEM209	12,-1557
chr10:89568229-89569562	chr10	+	89568616	89569377	True	NM_032810,NR_028492	chr10,chr10	-,+	ATAD1,CFLP1	8595,8692
chr16:87799020-87799241	chr16	+	87799115	87799175	True	NM_020655,NM_001184856,NM_017566,NM_001184854	chr16,chr16,chr16,chr16	+,-,-,-	JPH3,KLHDC4,KLHDC4,KLHDC4	-162667,473,473,473
chr9:91789630-91790702	chr9	+	91789696	91790712	True	NM_016848,NM_001827	chr9,chr9	-,+	SHC3,CKS2	3024,135400
chr1:93428166-93429539	chr1	+	93428230	93429232	True	NM_001006605,NM_001164391	chr1,chr1	-,+	FAM69A,MTF2	-1151,115559
chr8:144239404-144239715	chr8	+	144239438	144239580	True	NM_178172,NM_001135655,NM_002347,NM_001130478	chr8,chr8,chr8,chr8	+,-,-,-	GPIHBP1,LY6H,LY6H,LY6H	55487,2225,1927,2523
chr6:132823101-132823758	chr6	+	132823110	132823737	True	NM_003569,NM_175057	chr6,chr6	-,+	STX7,TAAR9	10650,35689
chr1:45309509-45309818	chr1	+	45309725	45309833	True	NM_003738,NM_001166292,NM_001136537	chr1,chr1,chr1	-,-,+	PTCH2,PTCH2,BTBD19	-1109,-1109,-35622
chr12:21611606-21612512	chr12	+	21611673	21612309	True	NM_002907,NM_024854	chr12,chr12	-,+	RECQL,PYROXD1	42344,-21193
chr7:107420337-107421951	chr7	+	107420437	107421954	True	NM_000111,NR_024199	chr7,chr7	-,+	SLC26A3,CBLL1	21775,-36209
chr16:11921079-11921523	chr16	+	11921211	11921333	True	NR_024050,NM_001192,NR_024049	chr16,chr16,chr16	-,+,-	BCAR4,TNFRSF17,BCAR4	1406,137630,1406
chr11:55940719-55941035	chr11	+	55940847	55940926	True	NM_001004058,NM_001005492	chr11,chr11	-,+	OR8K5,OR5J2	-13054,3167
chr8:62615088-62616559	chr8	+	62615247	62616332	True	NM_004318,NM_173519	chr8,chr8	-,+	ASPH,CLVS1	10930,-414779
chr9:112403122-112403328	chr9	+	112403172	112403316	True	NM_002829,NM_001037293	chr9,chr9	-,+	PTPN3,PALM2	-142579,-155
chr3:69146797-69147318	chr3	+	69146844	69147140	True	NM_006407,NM_198195	chr3,chr3	+,-	ARL6IP5,UBA3	-12805,-17320
chr22:31889175-31889841	chr22	+	31889626	31889852	True	NM_001164501,NM_014775,NM_001007467,NM_001164502,NM_019843	chr22,chr22,chr22,chr22,chr22	-,+,+,-,-	EIF4ENIF1,SFI1,SFI1,EIF4ENIF1,EIF4ENIF1	-4079,2408,2408,-3752,-3752
chr2:73115910-73117629	chr2	+	73116214	73117268	True	NM_003124,NM_015189	chr2,chr2	+,-	SPR,EXOC6B	-1753,-63037
chr18:12377659-12379440	chr18	+	12377888	12378716	True	NM_006796,NM_001142405	chr18,chr18	-,+	AFG3L2,SLMO1	-613,29178
chr1:227750848-227751239	chr1	+	227750956	227751226	True	NR_036753,NR_033184,NM_178549	chr1,chr1,chr1	-,+,+	ZNF847P,ZNF678,ZNF678	134232,-7,-7
chr2:96698490-96699135	chr2	+	96698642	96699096	True	NM_207328,NR_003698	chr2,chr2	-,+	GPAT2,LOC729234	1681,-22394
chr2:96698490-96699135	chr2	-	96456978	96457432	False	NM_207328,NM_138800	chr2,chr2	-,+	GPAT2,TRIM43	243345,-199263
chr4:25561601-25562105	chr4	+	25561996	25562096	True	NM_015187,NM_001177998	chr4,chr4	-,+	SEL1L3,SLC34A2	302564,95338
chr20:46613522-46615079	chr20	+	46613570	46615095	True	NR_026958,NM_198596	chr20,chr20	+,-	LOC284749,SULF2	373558,-198210
chr1:86175449-86176479	chr1	+	86175772	86176466	True	NM_001554,NM_001170670,NM_017953	chr1,chr1,chr1	+,-,-	CYR61,ZNHIT6,ZNHIT6	-129387,-1656,-1656
chr13:115000334-115000543	chr13	+	115000493	115000589	True	NM_001078645,NM_003903,NM_007368	chr13,chr13,chr13	+,+,-	CDC16,CDC16,RASA3	-182,-182,-102398
chr18:12306567-12306810	chr18	+	12306616	12306854	True	NM_006796,NM_032525	chr18,chr18	-,+	AFG3L2,TUBB6	70471,1402
chr9:123816597-123817926	chr9	+	123817182	123817855	True	NM_007018,NM_001735	chr9,chr9	+,-	CEP110,C5	32718,-4628
chr1:155224233-155224623	chr1	+	155224417	155224669	True	NM_020897,NM_001171811,NM_006589,NM_005698,NM_198264,NM_052837,NM_001005742,NM_001005741	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,-,-,-,-,-	HCN3,GBA,FAM189B,SCAMP3,FAM189B,SCAMP3,GBA,GBA	22704,-9764,655,7576,655,7576,-9764,-9764
chr1:48350446-48351348	chr1	+	48350598	48351182	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	111430,337174
chr17:27181343-27181557	chr17	+	27181342	27181546	True	NR_029685,NR_029970,NM_005702	chr17,chr17,chr17	-,-,+	MIR144,MIR451,ERAL1	7140,6962,496
chr5:150660785-150660994	chr5	+	150660789	150661035	True	NM_001167607,NM_001145017	chr5,chr5	+,-	GM2A,SLC36A3	-28227,22349
chr10:116576492-116577112	chr10	+	116576610	116577120	True	NM_001135051,NM_020940,NM_001003408	chr10,chr10,chr10	+,+,-	FAM160B1,FAM160B1,ABLIM1	4382,4382,-132196
chr1:45304956-45306021	chr1	+	45305206	45305743	True	NM_003738,NM_001166292,NM_001136537	chr1,chr1,chr1	-,-,+	PTCH2,PTCH2,BTBD19	2924,2924,-31103
chr2:190524086-190525749	chr2	+	190524419	190525797	True	NM_019048,NM_014585	chr2,chr2	+,-	ASNSD1,SLC40A1	327,-78882
chr6:33420305-33421023	chr6	+	33420470	33420975	True	NM_152735,NM_015921	chr6,chr6	+,-	ZBTB9,CUTA	1380,-34405
chr6:33420305-33421023	chr6_ssto_hap7	+	4900714	4901219	False	NM_001014840	chr6_ssto_hap7	-	CUTA	-34403
chr16:89677176-89678304	chr16	+	89677688	89678345	True	NM_001083314,NM_001128141,NM_004413	chr16,chr16,chr16	-,+,+	CHMP1A,DPEP1,DPEP1	45834,1370,8654
chr3:44321863-44322568	chr3	+	44322149	44322557	True	NM_181489,NM_001145030	chr3,chr3	-,+	ZNF445,C3orf77	196655,-38830
chr12:45694122-45695711	chr12	+	45694332	45695736	True	NM_001142678,NR_037144	chr12,chr12	+,-	ANO6,PLEKHA8P1	-7923,-84543
chr7:86789886-86791808	chr7	+	86789970	86791859	True	NR_024549,NR_024550,NM_024315,NM_021145,NM_001142327,NM_001142326	chr7,chr7,chr7,chr7,chr7,chr7	+,+,-,+,+,+	DMTF1,DMTF1,C7orf23,DMTF1,DMTF1,DMTF1	-8352,-8352,57229,-8159,-8352,-8352
chr4:111119050-111119257	chr4	+	111119066	111119304	True	NM_001130721,NM_024090,NM_001977	chr4,chr4,chr4	-,-,+	ELOVL6,ELOVL6,ENPEP	517,566,277924
chr20:48809004-48809436	chr20	+	48809003	48809178	True	NR_027889,NM_005194	chr20,chr20	-,+	TMEM189,CEBPB	-38668,-1678
chr1:93936352-93937170	chr1	+	93936460	93936997	True	NR_034089,NM_017737	chr1,chr1	-,+	LOC100131564,FNBP1L	-125092,-22829
chr16:2581983-2582197	chr16	+	2582004	2582160	True	NM_001048212,NR_036139,NM_031268,NM_002613	chr16,chr16,chr16,chr16	-,-,+,+	CEMP1,MIR3178,PDPK1,PDPK1	-595,2,5809,5809
chr2:196544059-196545970	chr2	+	196544261	196545654	True	NM_020342,NM_018897	chr2,chr2	+,-	SLC39A10,DNAH7	-22471,387932
chr5:172410733-172410961	chr5	+	172410770	172410966	True	NR_026682,NM_003945	chr5,chr5	-,+	LOC100268168,ATP6V0E1	-24399,-58
chr19:46973779-46974503	chr19	+	46973967	46974371	True	NM_006247,NM_018215,NM_001103149	chr19,chr19,chr19	+,-,-	PPP5C,PNMAL1,PNMAL1	-123767,499,499
chr3:3169139-3170000	chr3	+	3169194	3169782	True	NM_175727,NM_182916	chr3,chr3	-,+	IL5RA,TRNT1	-17136,-645
chr13:73301863-73302097	chr13	+	73301882	73302014	True	NM_001071775,NM_024808	chr13,chr13	-,+	MZT1,C13orf34	4,27
chr12:125550618-125550910	chr12	+	125550800	125550952	True	NM_032656,NM_023928	chr12,chr12	-,+	DHX37,AACS	-77133,-926
chr13:99407890-99408103	chr13	+	99407893	99408131	True	NM_005073,NM_001144072	chr13,chr13	-,+	SLC15A1,UBAC2	-2964,444547
chr17:35305158-35305845	chr17	+	35305244	35305894	True	NM_012138,NM_198837	chr17,chr17	+,-	AATF,ACACA	280,350848
chr14:70885174-70887054	chr14	+	70885262	70887059	True	NM_001202548,NM_001202549,NM_001202547,NM_003813,NM_018373	chr14,chr14,chr14,chr14,chr14	-,-,-,+,-	SYNJ2BP-COX16,SYNJ2BP-COX16,SYNJ2BP-COX16,ADAM21,SYNJ2BP	-1455,-1455,-1455,37157,-1455
chr3:58654826-58655273	chr3	+	58654853	58655126	True	NM_138805,NM_153331	chr3,chr3	-,+	FAM3D,KCTD6	-2292,-170812
chrY:2709909-2710207	chrY	+	2709913	2710207	True	NM_003140,NM_001008	chrY,chrY	-,+	SRY,RPS4Y1	-54121,-341
chr10:32890292-32891208	chr10	+	32890330	32890474	True	NM_024688,NM_025209	chr10,chr10	+,-	C10orf68,EPC1	-33739,-254217
chr10:121650361-121651189	chr10	+	121650404	121651133	True	NM_024834,NM_007190,NR_037771	chr10,chr10,chr10	-,+,+	MCMBP,SEC23IP,SEC23IP	-18010,951,951
chr8:64177949-64178191	chr8	+	64178036	64178218	True	NM_152758,NM_000370	chr8,chr8	+,-	YTHDF3,TTPA	-96966,-179424
chr22:37174051-37175357	chr22	+	37174472	37175370	True	NM_001177701,NR_033531,NM_006860,NM_000631	chr22,chr22,chr22,chr22	-,-,-,+	IFT27,IFT27,IFT27,NCF4	-2300,-2300,-2300,81659
chr4:68576263-68577520	chr4	+	68576404	68577554	True	NR_015439,NM_018227	chr4,chr4	+,-	LOC550112,UBA6	-9474,-9515
chr21:46424832-46426027	chr21	+	46424836	46426058	True	NM_058190,NR_024089	chr21,chr21	+,-	C21orf70,NCRNA00162	-64934,-194
chr6:33356040-33356618	chr6_qbl_hap6	+	4588377	4588634	False	NM_001350	chr6_qbl_hap6	-	DAXX	-65335
chr6:33356040-33356618	chr6_mcf_hap5	+	4829906	4830163	False	NM_001350,NM_001185181	chr6_mcf_hap5,chr6_mcf_hap5	-,+	DAXX,PFDN6	-65371,-98810
chr6:33356040-33356618	chr6_ssto_hap7	+	4836366	4836623	False	NM_001014433,NM_002263	chr6_ssto_hap7,chr6_ssto_hap7	-,+	CUTA,KIFC1	29751,2905
chr6:33356040-33356618	chr6	+	33356151	33356408	True	NM_001014433,NM_002263	chr6,chr6	-,+	CUTA,KIFC1	29720,2904
chr10:21788177-21788636	chr10	+	21788304	21788674	True	NM_001010911,NM_001195627,NR_031736	chr10,chr10,chr10	-,+,-	C10orf114,MLLT10,MIR1915	-2091,34426,-2734
chr4:186294140-186294618	chr4	+	186294187	186294637	True	NM_181726,NM_018409	chr4,chr4	+,-	ANKRD37,LRP2BP	23202,5565
chr11:2906355-2906610	chr11	+	2906429	2906571	True	NM_183233,NM_000076,NM_001122631,NM_001122630	chr11,chr11,chr11,chr11	+,-,-,-	SLC22A18,CDKN1C,CDKN1C,CDKN1C	14379,474,474,474
chr19:8475745-8477052	chr19	+	8476176	8476389	True	NM_016496,NM_001005416,NM_001005415,NM_198471	chr19,chr19,chr19,chr19	+,+,+,-	MARCH2,MARCH2,MARCH2,KANK3	1797,1797,1797,-68030
chr4:107956783-107957110	chr4	+	107956900	107957148	True	NM_014421,NM_001142416	chr4,chr4	-,+	DKK2,AIMP1	355,-719287
chr11:89408156-89409903	chr11	+	89408733	89409524	True	NM_153696,NM_001143837	chr11,chr11	+,-	FOLH1B,NOX4	-16319,-85954
chr11:89408156-89409903	chr11	-	49191298	49191348	False	NM_001014986,NR_027044	chr11,chr11	-,+	FOLH1,LOC440040	38924,388731
chr10:108891399-108892130	chr10	+	108891498	108892153	True	NM_001013031,NM_014978	chr10,chr10	-,+	SORCS1,SORCS3	32192,-2490697
chr15:75941675-75941916	chr15	+	75941738	75941952	True	NM_153271,NM_018285	chr15,chr15	+,-	SNX33,IMP3	-441,-9074
chr7:2274044-2275008	chr7	+	2274044	2275046	True	NM_003550,NM_198954,NM_002452,NM_198952,NM_198950,NM_013393,NM_001013836,NM_001013837,NM_198948,NM_198949,NM_198953	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,+,-,-,-,+,+,+	MAD1L1,NUDT1,NUDT1,NUDT1,NUDT1,FTSJ2,MAD1L1,MAD1L1,NUDT1,NUDT1,NUDT1	-1461,7493,6810,6849,6849,6837,-1461,-1461,6810,6810,7493
chr16:23845368-23846949	chr16	+	23845386	23846586	True	NM_212535,NM_033266,NM_002738	chr16,chr16,chr16	+,-,+	PRKCB,ERN2,PRKCB	713,-120565,713
chr3:40546731-40547051	chr3	+	40546734	40547056	True	NM_175888,NR_033965,NR_024114	chr3,chr3,chr3	+,-,+	ZNF620,FLJ33065,ZNF620	473,-195545,473
chr1:23520055-23520930	chr1	+	23520113	23520978	True	NR_036057,NM_000864	chr1,chr1	+,-	MIR3115,HTR1D	-149366,301
chr9:5833498-5833929	chr9	+	5833499	5833935	True	NM_024896,NM_005511	chr9,chr9	-,+	ERMP1,MLANA	-418,56973
chr5:11856024-11857364	chr5	+	11856371	11857377	True	NM_001332,NR_033383	chr5,chr5	-,+	CTNND2,TAG	46783,717591
chr15:90358554-90358929	chr15	+	90358875	90358935	True	NM_001039958,NM_001150	chr15,chr15	+,-	MESP2,ANPEP	-39337,-803
chr1:151226983-151227223	chr1	+	151227047	151227219	True	NM_005997,NM_002810	chr1,chr1	-,+	VPS72,PSMD4	-64407,-23
chr2:29337512-29338029	chr2	+	29337529	29337945	True	NM_001029883,NM_024692	chr2,chr2	-,+	C2orf71,CLIP4	-40402,362
chr11:2890488-2890703	chr11	+	2890553	2890685	True	NR_024627,NM_000076	chr11,chr11	+,-	KCNQ1DN,CDKN1C	577,16360
chr6:167528227-167529794	chr6	+	167528238	167529676	True	NM_005299,NM_031409,NM_004367	chr6,chr6,chr6	-,+,+	GPR31,CCR6,CCR6	41693,6564,-2994
chr16:67519348-67519956	chr16	+	67519347	67519409	True	NM_004691,NM_001138,NM_024519	chr16,chr16,chr16	-,-,+	ATP6V0D1,AGRP,FAM65A	-4258,-1631,43307
chr8:22226423-22228343	chr8	+	22226482	22228115	True	NM_015359,NM_001128431,NR_029714,NM_001135153,NM_001135154	chr8,chr8,chr8,chr8,chr8	+,+,-,+,+	SLC39A14,SLC39A14,MIR320A,SLC39A14,SLC39A14	-1778,-1778,-123926,-1490,-1778
chr16:20774773-20775310	chr16	+	20774834	20775240	True	NM_017736,NM_202000,NM_005622	chr16,chr16,chr16	-,+,+	THUMPD1,ACSM3,ACSM3	-21635,71,71
chr11:112833693-112833897	chr11	+	112833807	112833945	True	NR_034101,NM_001076682,NM_000615,NM_181351	chr11,chr11,chr11,chr11	-,+,+,+	LOC100288346,NCAM1,NCAM1,NCAM1	310728,-1863,-1863,-1863
chr1:20808287-20809993	chr1	+	20808359	20810031	True	NM_207334,NM_018584	chr1,chr1	+,-	FAM43B,CAMK2N1	68900,2747
chr19:52895644-52897385	chr19	+	52895849	52897437	True	NM_001102657,NM_032423	chr19,chr19	-,+	ZNF836,ZNF528	-220953,3683
chr4:175189884-175190758	chr4	+	175189961	175190306	True	NM_012180,NM_001040157	chr4,chr4	-,+	FBXO8,KIAA1712	15157,14521
chr16:19422855-19424768	chr16	+	19422868	19424510	True	NM_001105249,NM_001105248,NM_016641	chr16,chr16,chr16	+,+,-	TMC5,TMC5,GDE1	-862,-862,108990
chr16:57518359-57518878	chr16	+	57518364	57518858	True	NM_018110,NM_032940	chr16,chr16	-,+	DOK4,POLR2C	1577,-21864
chr15:89345106-89346017	chr15	+	89345195	89345992	True	NM_001135,NM_178232,NM_013227	chr15,chr15,chr15	+,-,+	ACAN,HAPLN3,ACAN	681,92833,681
chrX:118696670-118697231	chrX	+	118696737	118697206	True	NM_001170569,NM_003336,NM_001170570,NM_022101	chrX,chrX,chrX,chrX	-,+,-,-	CXorf56,UBE2A,CXorf56,CXorf56	2216,11292,2241,2241
chr16:65156411-65156723	chr16	+	65156433	65156663	True	NM_001795,NM_001797	chr16,chr16	+,-	CDH5,CDH11	1243861,-514
chr2:64877089-64879017	chr2	+	64877129	64878931	True	NM_014755,NR_034023	chr2,chr2	-,+	SERTAD2,LOC339807	2165,-42735
chr2:219858903-219859168	chr2	+	219858927	219859104	True	NM_057093,NM_057094,NM_017521,NR_024385,NR_029867,NM_005209	chr2,chr2,chr2,chr2,chr2,chr2	-,-,-,+,-,-	CRYBA2,CRYBA2,FEV,LOC151300,MIR375,CRYBA2	-800,-800,-8548,-17972,7377,-806
chr1:85126604-85127672	chr1	+	85126808	85127728	True	NR_027379,NR_036561	chr1,chr1	-,+	C1orf180,SPATA1	-26105,-154894
chr3:195660905-195662583	chr3	+	195661500	195662008	True	NR_034088,NM_005781	chr3,chr3	+,-	LOC401109,TNK2	207498,-25620
chr2:114340716-114341300	chr2	+	114341049	114341259	True	NR_026821,NR_024077,NR_024005	chr2,chr2,chr2	+,+,-	FAM138B,WASH2P,DDX11L2	-6141,-26,17944
chr12:2028432-2029017	chr12	+	2028455	2029019	True	NM_001163926,NM_172364	chr12,chr12	+,-	LRTM2,CACNA2D4	-99073,-585
chr11:841148-841596	chr11	+	841175	841629	True	NM_003271,NM_001039490,NM_021128,NM_139030,NM_001025239,NM_001025238,NM_004357,NM_139029,NM_001025235,NM_001025234,NM_001025237,NM_001025236	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,-,+,+,+,+,+,+,+,+,+	TSPAN4,CD151,POLR2L,CD151,TSPAN4,TSPAN4,CD151,CD151,TSPAN4,TSPAN4,TSPAN4,TSPAN4	1194,-8274,950,-8274,1194,1194,-8274,-8274,1311,2451,2816,1311
chr17:79305791-79306083	chr17	+	79305871	79306117	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	67422,-1397
chr14:81683262-81685095	chr14	+	81683328	81685037	True	NM_201595,NM_015859,NM_000369	chr14,chr14,chr14	-,-,+	GTF2A1,GTF2A1,TSHR	2594,2313,-261518
chr5:6453986-6454809	chr5	+	6454283	6454854	True	NM_001145161,NM_032286	chr5,chr5	+,-	UBE2QL1,MED10	-5599,-75644
chr5:6634608-6636463	chr5	+	6634686	6636059	True	NM_017755,NR_037947,NM_001193455,NM_001047	chr5,chr5,chr5,chr5	-,-,-,+	NSUN2,NSUN2,NSUN2,SRD5A1	-1213,-1213,-1213,-1238
chr2:238499122-238499442	chr2	+	238499140	238499480	True	NM_015893,NM_022449,NR_033308	chr2,chr2,chr2	+,-,-	PRLH,RAB17,RAB17	-23974,339,339
chr15:63414849-63415735	chr15	+	63414862	63415615	True	NM_032857,NM_015920,NM_171846	chr15,chr15,chr15	+,-,+	LACTB,RPS27L,LACTB	-920,34176,-920
chr13:111644438-111644651	chr13	+	111644547	111644649	True	NM_017664,NM_001113511	chr13,chr13	-,+	ANKRD10,ARHGEF7	-77131,122974
chr16:70285976-70287067	chr16	+	70286265	70287045	True	NM_058219,NM_001014449	chr16,chr16	-,+	EXOSC6,DDX19B	-432,46026
chr1:204655084-204656379	chr1	+	204655224	204656332	True	NM_201630,NM_001005389,NM_006338	chr1,chr1,chr1	-,+,-	LRRN2,NFASC,LRRN2	-627,141449,-743
chr5:102589697-102590069	chr5	+	102589697	102590101	True	NM_033211,NM_017676	chr5,chr5	+,-	C5orf30,GIN1	4340,-133855
chr1:47527990-47528237	chr1	+	47527989	47528237	True	NM_000778,NM_178134	chr1,chr1	-,+	CYP4A11,CYP4Z1	-120833,4922
chr1:47527990-47528237	chr1	-	47383796	47383912	False	NR_002788,NM_178033	chr1,chr1	-,+	CYP4Z2P,CYP4X1	-17649,105327
chrX:48934386-48936035	chrX	+	48934523	48935783	True	NM_007213,NM_001163323,NM_001029896	chrX,chrX,chrX	-,+,-	PRAF2,CCDC120,WDR45	-2861,-18051,1831
chr4:148604563-148604969	chr4	+	148604616	148604985	True	NM_024605,NM_138364	chr4,chr4	+,-	ARHGAP10,PRMT10	48467,345
chr21:45137898-45138150	chr21	+	45137956	45138096	True	NM_003681,NM_000100	chr21,chr21	+,-	PDXK,CSTB	881,58213
chr17:4336860-4337950	chr17	+	4336865	4337673	True	NM_003342,NM_182538	chr17,chr17	-,+	UBE2G1,SPNS3	-66896,-23
chr11:20044017-20044749	chr11	+	20044086	20044696	True	NM_001111019,NM_001029865	chr11,chr11	+,-	NAV2,DBX1	-61,137230
chr16:67970476-67970863	chr16	+	67970712	67970858	True	NM_006742,NM_001907,NM_002801,NM_000229	chr16,chr16,chr16,chr16	+,-,-,-	PSKH1,CTRL,PSMB10,LCAT	-43588,-4934,16,7207
chr17:16122083-16123170	chr17	+	16122285	16123225	True	NM_004278,NM_006311	chr17,chr17	+,-	PIGL,NCOR1	-1838,-3411
chr12:120555709-120556205	chr12	+	120556022	120556248	True	NM_006861,NM_207311,NM_001167606	chr12,chr12,chr12	-,+,-	RAB35,CCDC64,RAB35	-1379,-128436,-1379
chr1:227482483-227483067	chr1	+	227482639	227482828	True	NM_178549,NM_003607	chr1,chr1	+,-	ZNF678,CDC42BPA	268391,23051
chr3:125492030-125492782	chr3	+	125492150	125492206	True	NR_024250,NR_031687	chr3,chr3	+,-	LOC100125556,MIR548I1	143237,17241
chr12:57484189-57484961	chr12	+	57484305	57485009	True	NM_015257,NM_005967	chr12,chr12	-,+	TMEM194A,NAB2	-11731,-1679
chr2:27645650-27647404	chr2	+	27645987	27646982	True	NM_177983,NM_013392	chr2,chr2	-,+	PPM1G,NRBP1	-13491,4490
chr17:39967683-39967966	chr17	+	39967699	39967975	True	NM_021939,NM_006455	chr17,chr17	+,-	FKBP10,LEPREL4	986,526
chr10:108920466-108921318	chr10	+	108920700	108921328	True	NM_001013031,NM_014978,NM_052918	chr10,chr10,chr10	-,+,-	SORCS1,SORCS3,SORCS1	3014,-2519892,3014
chr9:139308549-139309088	chr9	+	139308588	139309042	True	NM_006643,NM_015160,NM_001039707,NM_001039708	chr9,chr9,chr9,chr9	-,+,-,-	SDCCAG3,PMPCA,SDCCAG3,SDCCAG3	-3534,-3530,-3534,-3534
chr18:13620186-13620522	chr18	+	13620236	13620570	True	NM_001003675,NM_001003674,NM_001098801,NM_181483,NM_004338	chr18,chr18,chr18,chr18,chr18	+,+,-,+,+	C18orf1,C18orf1,C18orf19,C18orf1,C18orf1	-8622,-8622,106071,296,296
chr2:88747858-88748114	chr2	+	88747858	88748116	True	NM_152670,NM_001135649	chr2,chr2	+,-	C2orf51,FOXI3	76052,3987
chr3:170076586-170076888	chr3	+	170076590	170076945	True	NM_001145098,NM_005414,NM_024947,NM_001145097	chr3,chr3,chr3,chr3	+,+,-,+	SKIL,SKIL,PHC3,SKIL	-1169,-1169,-177053,465
chr2:130942687-130943243	chr2	+	130943064	130943246	True	NM_017951,NM_025029,NM_017751,NR_033232,NR_033231,NR_033230,NM_001171083	chr2,chr2,chr2,chr2,chr2,chr2,chr2	-,+,-,-,-,-,-	SMPD4,MZT2B,SMPD4,SMPD4,SMPD4,SMPD4,SMPD4	-3734,-3614,-3734,-3734,-3734,-2741,-3734
chr11:35415871-35417044	chr11	+	35416054	35417019	True	NM_014344,NM_004171	chr11,chr11	+,-	FJX1,SLC1A2	222715,24136
chr17:41157659-41158001	chr17	+	41157772	41157846	True	NM_006373,NM_000988,NM_005533	chr17,chr17,chr17	-,+,+	VAT1,RPL27,IFI35	16675,-7377,895
chr2:160918589-160918932	chr2	+	160918653	160918941	True	NM_001195641,NM_022826,NM_007366,NM_001007267	chr2,chr2,chr2,chr2	-,+,-,-	PLA2R1,MARCH7,PLA2R1,PLA2R1	235,-349694,235,235
chr1:160256919-160257586	chr1	+	160257260	160257464	True	NR_036492,NR_002190,NM_002857,NM_001193644,NR_036493	chr1,chr1,chr1,chr1,chr1	-,+,-,-,-	PEX19,SUMO1P3,PEX19,PEX19,PEX19	-2319,29590,-2319,-2319,-2319
chr4:32029584-32031054	chr4	+	32029796	32031070	True	NM_015230,NM_032457	chr4,chr4	-,+	ARAP2,PCDH7	4214959,-1307813
chr2:128787341-128788367	chr2	+	128787716	128788348	True	NM_024545,NM_020120,NM_001145928	chr2,chr2,chr2	-,+,-	SAP130,UGGT1,SAP130	-2847,60405,-2847
chr5:175084151-175084658	chr5	+	175084245	175084635	True	NM_001131055,NM_000794	chr5,chr5	+,-	HRH2,DRD1	404,-213082
chr2:21267027-21267806	chr2	+	21267035	21267785	True	NM_182828,NM_000384	chr2,chr2	+,-	GDF7,APOB	-400662,-90
chr1:172718248-172719035	chr1	+	172718271	172718920	True	NM_000639,NM_005092	chr1,chr1	+,-	FASLG,TNFSF18	-90139,301234
chr7:23762721-23763575	chr7	+	23762864	23763501	True	NM_032944,NR_002711	chr7,chr7	+,-	STK31,CLK2P	-12933,-136718
chr8:28175708-28177687	chr8	+	28175907	28177573	True	NM_018660,NM_006228	chr8,chr8	-,+	ZNF395,PNOC	66454,-1310
chr1:156591670-156593264	chr1	+	156592252	156593060	True	NM_182679,NM_021817	chr1,chr1	-,+	GPATCH4,HAPLN2	-20973,-3217
chr12:9098119-9100024	chr12	+	9098203	9099713	True	NM_004426,NM_002355	chr12,chr12	+,-	PHC1,M6PR	-30938,2598
chr1:180203141-180203489	chr1	+	180203203	180203423	True	NR_037642,NM_033343	chr1,chr1	-,+	LOC100527964,LHX4	40443,-3821
chr1:75201471-75203286	chr1	+	75201477	75203136	True	NM_001134759,NM_001162916,NM_001130043,NM_001130042,NR_027962,NM_138467,NM_001889	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,+,-,-,+,+,-	CRYZ,TYW3,CRYZ,CRYZ,TYW3,TYW3,CRYZ	-2385,-2694,-2385,-2385,-2668,-2690,-2385
chr16:1877197-1877544	chr16	+	1877224	1877576	True	NM_001142398,NM_005326,NM_031208,NM_001040427,NM_001018104	chr16,chr16,chr16,chr16,chr16	+,-,+,-,+	FAHD1,HAGH,FAHD1,HAGH,FAHD1	-50,-29,-50,-29,-50
chr11:64010466-64012148	chr11	+	64011044	64012010	True	NM_057092,NM_138689,NM_001184883,NM_004470,NM_000932,NM_001135208,NM_003377	chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,-,+,+,+,+,+	FKBP2,PPP1R14B,PLCB3,FKBP2,PLCB3,FKBP2,VEGFB	-1510,2453,6984,-2685,6984,-2494,-8832
chr6:41299162-41299406	chr6	+	41299172	41299388	True	NM_001199510,NM_004828,NM_001199509,NM_018643	chr6,chr6,chr6,chr6	+,+,+,-	NCR2,NCR2,NCR2,TREM1	4139,4139,4139,-44715
chr2:175470088-175471318	chr2	+	175470473	175471366	True	NM_003387,NM_024583	chr2,chr2	-,+	WIPF1,SCRN3	27991,-210067
chr1:117306480-117306843	chr1	+	117306684	117306830	True	NM_001767,NM_001542	chr1,chr1	+,-	CD2,IGSF3	-9649,-96370
chr12:15942957-15944564	chr12	+	15943077	15944348	True	NM_004447,NM_007178	chr12,chr12	-,+	EPS8,STRAP	-567,90939
chr4:102268947-102269193	chr4	+	102268984	102269204	True	NM_001130692,NM_000944,NM_001130691,NR_033874	chr4,chr4,chr4,chr4	-,-,-,+	PPP3CA,PPP3CA,PPP3CA,FLJ20021	-356,-356,-356,-101
chr3:138823303-138824007	chr3	+	138823305	138823964	True	NM_001134657,NR_026783	chr3,chr3	-,+	PRR23C,BPESC1	-59571,-330
chr7:44163939-44165002	chr7	+	44163954	44164858	True	NM_001129,NM_006230,NM_001127218	chr7,chr7,chr7	+,-,-	AEBP1,POLD2,POLD2	-20045,-807,-807
chr10:75494277-75494656	chr10	+	75494456	75494518	True	NM_198597,NR_026592,NM_004922	chr10,chr10,chr10	+,-,+	SEC24C,BMS1P4,SEC24C	9612,-4184,9612
chr7:101465900-101466628	chr7	+	101466343	101466659	True	NM_181552,NM_138403,NM_001913,NM_001202543,NM_001202546,NM_001202544,NM_001202545,NM_181500	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,-,+,+,+,+,+,+	CUX1,MYL10,CUX1,CUX1,CUX1,CUX1,CUX1,CUX1	-5512,-193767,-7210,-7210,-7106,-7210,-7210,-7210
chr17:203390-204078	chr17	+	203491	203635	True	NM_001190412,NM_001190413,NM_001190411,NM_001013672,NM_006987	chr17,chr17,chr17,chr17,chr17	-,-,-,+,-	RPH3AL,RPH3AL,RPH3AL,C17orf97,RPH3AL	-858,-858,-858,56482,-858
chr1:4044145-4044482	chr1	+	4044205	4044514	True	NR_024455,NM_207356	chr1,chr1	+,-	LOC100133612,C1orf174	-227288,-227348
chr2:187692983-187694963	chr2	+	187693012	187694585	True	NM_182521,NM_177454	chr2,chr2	-,+	ZSWIM2,FAM171B	19369,-134281
chr3:181338867-181340346	chr3	+	181339244	181340374	True	NR_033725,NR_004053	chr3,chr3	-,+	DNAJC19,SOX2OT	-631682,-11144
chr7:16921697-16922490	chr7	+	16921717	16922520	True	NM_176813,NM_014399	chr7,chr7	-,+	AGR3,TSPAN13	-104,-128426
chr6:3902504-3903209	chr6	+	3902587	3903173	True	NM_183373,NM_012135	chr6,chr6	-,+	C6orf145,FAM50B	-150341,-53006
chr5:154130438-154132068	chr5	+	154130471	154131751	True	NM_015315,NM_032385	chr5,chr5	+,-	LARP1,C5orf4	-38068,98513
chrX:153720907-153721952	chrX	+	153721057	153721684	True	NM_014235,NM_017514,NM_001142392,NM_019848,NM_001142391	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	UBL4A,PLXNA3,SLC10A3,SLC10A3,SLC10A3	-6125,-34498,-2055,-2055,-2055
chr3:166558841-166560258	chr3	+	166559199	166560283	True	NM_001122752,NM_001199202	chr3,chr3	+,-	SERPINI1,ZBBX	893148,537838
chr10:6427475-6428640	chr10	+	6427585	6428437	True	NM_004566,NM_006257	chr10,chr10	+,-	PFKFB3,PRKCQ	-182804,193851
chr1:11917108-11918247	chr1	+	11917224	11918174	True	NM_002521,NR_037806,NM_006172	chr1,chr1,chr1	-,+,-	NPPB,NPPA-AS1,NPPA	868,-16899,-9384
chr19:56165976-56166221	chr19	+	56166012	56166187	True	NM_203374,NM_007279,NM_001012478,NM_013301	chr19,chr19,chr19,chr19	-,+,+,+	ZNF784,U2AF2,U2AF2,CCDC106	-30071,-647,-647,-7109
chrX:39959265-39959466	chrX	+	39959324	39959496	True	NM_005765,NM_001123385,NM_017745	chrX,chrX,chrX	+,-,-	ATP6AP2,BCOR,BCOR	480719,-2605,-2605
chr2:220435770-220436024	chr2	+	220435775	220435989	True	NM_001173431,NM_015311,NM_002191,NM_001173408	chr2,chr2,chr2,chr2	-,-,+,-	OBSL1,OBSL1,INHA,OBSL1	329,329,964,329
chr3:183270845-183271063	chr3	+	183270856	183271096	True	NM_130446,NM_017644	chr3,chr3	-,+	KLHL6,KLHL24	2453,82314
chr12:6796043-6796470	chr12	+	6796145	6796353	True	NM_001039917,NM_001039916,NM_001039920,NM_001135734,NM_001039919,NM_001039918,NM_133476,NM_001164094	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,-,-,-,-,-,-,+	ZNF384,ZNF384,ZNF384,ZNF384,ZNF384,ZNF384,ZNF384,COPS7A	2366,1522,2366,2373,2366,2224,2224,36796
chr9:845015-846265	chr9	+	845034	845981	True	NM_021951,NM_152569	chr9,chr9	+,-	DMRT1,C9orf66	-3402,-629141
chrX:123480935-123481393	chrX	+	123480985	123481409	True	NM_002351,NM_001114937,NM_001081550	chrX,chrX,chrX	+,+,-	SH2D1A,SH2D1A,THOC2	-904,-904,-614081
chr2:23628180-23629403	chr2	+	23628290	23629434	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	520550,-20048
chr1:40348328-40348949	chr1	+	40348330	40348829	True	NM_001136493,NM_017646	chr1,chr1	+,-	MFSD2A,TRIT1	71954,399
chr12:34175407-34175617	chr12	+	34175424	34175602	True	NM_198992,NM_032834	chr12,chr12	-,+	SYT10,ALG10	-582670,-259
chr8:38757876-38758497	chr8	+	38757945	38758350	True	NM_021623,NM_001024380	chr8,chr8	+,-	PLEKHA2,TM2D2	402,95741
chrX:153030295-153030496	chrX	+	153030316	153030476	True	NM_001163257,NM_004135,NM_005393	chrX,chrX,chrX	+,-,+	PLXNB3,IDH3G,PLXNB3	-716,29541,-716
chr19:4403779-4405123	chr19	+	4403796	4405167	True	NM_001199943,NM_003025,NM_001199944,NM_005483	chr19,chr19,chr19,chr19	-,-,-,+	SH3GL1,SH3GL1,SH3GL1,CHAF1A	-3231,-3231,-3381,-1193
chr21:34399479-34399782	chr21	+	34399497	34399701	True	NR_024102,NM_005806	chr21,chr21	-,+	C21orf54,OLIG2	142890,-1309
chr7:99646034-99647400	chr7	+	99646682	99647435	True	NM_145914,NM_017715	chr7,chr7	+,-	ZSCAN21,ZNF3	-19,31986
chrX:52860668-52861218	chrX	+	52861016	52861260	True	NM_130775,NM_001009616	chrX,chrX	+,-	XAGE5,SPANXN5	-19839,-34628
chr3:53150912-53152656	chr3	+	53151222	53152672	True	NM_006254,NM_052859	chr3,chr3	+,-	PRKCD,RFT1	42550,11848
chr8:26369911-26370159	chr8	+	26369921	26370075	True	NM_001197293,NM_007257	chr8,chr8	+,-	DPYSL2,PNMA2	1633,1458
chr7:158937622-158937912	chr7	+	158937626	158937886	True	NR_024394	chr7	+	LOC154822	-136632
chr17:3820264-3820739	chr17	+	3820291	3820739	True	NM_002558,NM_031965	chr17,chr17	-,+	P2RX1,GSG2	-331,-193145
chr14:61198379-61200285	chr14	+	61198700	61200313	True	NM_002431,NM_001177963,NM_017420	chr14,chr14,chr14	+,+,-	MNAT1,MNAT1,SIX4	1145,1145,-7848
chr11:67811639-67811860	chr11	+	67811666	67811774	True	NM_030930,NM_006019,NM_006053	chr11,chr11,chr11	-,+,+	UNC93B1,TCIRG1,TCIRG1	-40073,-5255,-1270
chr2:74053872-74055331	chr2	+	74053893	74055282	True	NM_201647,NM_006463,NM_003584,NM_213622	chr2,chr2,chr2,chr2	+,+,-,+	STAMBP,STAMBP,DUSP11,STAMBP	803,844,-46609,864
chr16:69794734-69795397	chr16	+	69795117	69795181	True	NM_014062,NM_199423,NM_007014	chr16,chr16,chr16	-,+,+	NOB1,WWP2,WWP2	-6288,1092,1092
chr1:162531950-162532469	chr1	+	162532035	162532501	True	NM_053282,NM_003115	chr1,chr1	-,+	SH2D1B,UAP1	-150107,-790
chr17:60111770-60112195	chr17	+	60111901	60112204	True	NM_001144933,NM_005121	chr17,chr17	+,-	EFCAB3,MED13	335374,30489
chr5:95157888-95158121	chr5	+	95157965	95158169	True	NR_026936,NM_002064,NM_001118890	chr5,chr5,chr5	+,-,-	C5orf27,GLRX,GLRX	29766,458,458
chr1:20308027-20309333	chr1	+	20308030	20309099	True	NM_000300,NM_001161728,NM_000929,NM_001161729,NM_001161727	chr1,chr1,chr1,chr1,chr1	-,-,+,-,-	PLA2G2A,PLA2G2A,PLA2G5,PLA2G2A,PLA2G2A	-1098,-1098,87601,-1878,-1098
chr3:137888493-137890033	chr3	+	137889202	137889926	True	NM_014154,NM_016216	chr3,chr3	+,-	ARMC8,DBR1	16221,3915
chr14:21151507-21151780	chr14	+	21151622	21151810	True	NM_001097577,NM_002937,NM_001145,NM_194431,NM_001001968	chr14,chr14,chr14,chr14,chr14	+,+,+,+,-	ANG,RNASE4,ANG,RNASE4,OR6S1	5121,561,525,5121,-41772
chr17:39871474-39873464	chr17	+	39872202	39873388	True	NM_001079870,NM_000805	chr17,chr17	-,+	HAP1,GAST	17560,-3640
chr11:134097535-134099318	chr11	+	134097788	134099351	True	NM_015261,NM_052875	chr11,chr11	-,+	NCAPD3,VPS26B	-3362,-3279
chr6:37397636-37398644	chr6	+	37397784	37398525	True	NM_015050,NM_138493	chr6,chr6	+,-	FTSJD2,C6orf129	2381,69226
chr17:40116954-40117848	chr17	+	40117006	40117798	True	NM_033133,NM_198830	chr17,chr17	+,-	CNP,ACLY	960,-41734
chr15:91766484-91766906	chr15	+	91766484	91766924	True	NM_014848,NM_018668	chr15,chr15	+,-	SV2B,VPS33B	-122996,-200651
chr8:96146667-96146906	chr8	+	96146676	96146954	True	NR_037484,NM_024613	chr8,chr8	-,+	MIR3150B,PLEKHF2	-61452,-778
chr11:18813708-18814072	chr11	+	18813873	18813947	True	NM_153347,NM_001039970,NM_032781,NM_006906	chr11,chr11,chr11,chr11	+,-,-,-	TMEM86A,PTPN5,PTPN5,PTPN5	-93573,-484,-484,-484
chr7:7222071-7222301	chr7	+	7222145	7222227	True	NM_020156,NR_034022	chr7,chr7	+,-	C1GALT1,LOC100131257	18,-85728
chr22:32870417-32870720	chr22	+	32870423	32870703	True	NM_174932,NM_012179,NM_001033024	chr22,chr22,chr22	-,+,+	BPIL2,FBXO7,FBXO7	-17050,3,520
chr20:52193348-52194354	chr20	+	52193354	52194361	True	NM_006526,NM_001193421	chr20,chr20	-,+	ZNF217,TSHZ2	5333,-391583
chr14:100527940-100528442	chr14	+	100528005	100528335	True	NM_016337,NM_206918	chr14,chr14	+,-	EVL,DEGS2	3415,97727
chr1:41329207-41330669	chr1	+	41329208	41330201	True	NM_172163,NM_133467	chr1,chr1	+,-	KCNQ4,CITED4	-79575,-1190
chr12:104692840-104693467	chr12	+	104692939	104693107	True	NM_006166,NM_001008394	chr12,chr12	-,+	NFYB,EID3	-160899,4441
chr17:21541083-21541805	chr7	+	57666824	57666880	True	NR_030766,NM_001159279	chr7,chr7	-,+	LOC642006,ZNF716	-418961,-156998
chr5:141002117-141002400	chr5	+	141002254	141002375	True	NM_005219,NM_001130029,NM_001079812	chr5,chr5,chr5	-,+,-	DIAPH1,RELL2,DIAPH1	-3632,14141,-3632
chr8:41521388-41521701	chr8	+	41521460	41521726	True	NM_020478,NR_030161,NM_178819,NM_020480,NM_001142445	chr8,chr8,chr8,chr8,chr8	-,-,+,-,-	ANK1,MIR486,AGPAT6,ANK1,ANK1	1128,-3434,-85804,1128,1128
chr22:38081788-38082333	chr22	+	38082066	38082372	True	NM_006498,NM_024313	chr22,chr22	-,+	LGALS2,NOL12	-106042,-5
chr1:244516653-244517816	chr1	+	244516718	244517653	True	NM_001012970,NM_001126	chr1,chr1	+,-	C1orf100,ADSS	-834,97838
chr17:39770179-39770862	chr17	+	39770303	39770803	True	NM_005801,NM_005557	chr17,chr17	+,-	EIF1,KRT16	74323,-1224
chr13:114144066-114144466	chr13	+	114144081	114144397	True	NM_017905,NM_001014283	chr13,chr13	+,-	TMCO3,DCUN1D2	910,676
chrX:52926762-52927644	chrX	+	52926770	52927425	True	NM_014138,NM_133179,NM_001099684	chrX,chrX,chrX	+,-,+	FAM156A,XAGE3,FAM156B	436,-29651,983
chrX:52926762-52927644	chrX	-	52986612	52987267	False	NM_014138,NM_001099684	chrX,chrX	-,-	FAM156A,FAM156B	-436,-983
chr7:32768807-32770546	chr7	+	32768855	32769892	True	NR_030320,NR_003502,NR_036680	chr7,chr7,chr7	+,+,-	MIR550A2,LOC441208,DPY19L1P1	2700,-1344,-10075
chr7:32768807-32770546	chr7	-	29723142	29724181	False	NR_036482,NR_024278,NR_036554,NR_027347	chr7,chr7,chr7,chr7	+,-,+,-	DPY19L2P3,LOC646762,DPY19L2P3,LOC100271874	588,623,1506,1306
chr22:42486578-42487002	chr22	+	42486641	42487017	True	NM_002490,NR_034118	chr22,chr22	-,+	NDUFA6,LOC100132273	-17,-19
chr22:17640922-17641260	chr22	+	17640951	17641119	True	NM_017829,NM_033070,NR_024482,NR_024483	chr22,chr22,chr22,chr22	-,-,+,+	CECR5,CECR5,CECR4,CECR4	5108,-782,-723,-723
chr22:23868657-23868906	chr22	+	23868663	23868863	True	NM_153615,NM_020070	chr22,chr22	+,-	RGL4,IGLL1	164184,53682
chr10:31985460-31985989	chr10	+	31985464	31986038	True	NM_001174094,NM_018287	chr10,chr10	+,-	ZEB1,ARHGAP12	-375451,231782
chr18:73122595-73123026	chr18	+	73122638	73123058	True	NM_005786,NM_001037331	chr18,chr18	+,-	TSHZ1,C18orf62	-199969,16581
chr18:56810439-56811174	chr18	+	56810744	56811062	True	NM_033280,NM_013435	chr18,chr18	+,-	SEC11C,RAX	-3682,129616
chr11:19262113-19262472	chr11	+	19262222	19262429	True	NM_001111018,NM_024680	chr11,chr11	+,-	NAV2,E2F8	109841,128
chrX:134303970-134304573	chrX	+	134304227	134304572	True	NM_001031705,NM_017863,NM_001078171	chrX,chrX,chrX	-,-,+	CXorf48,CXorf48,FAM127A	1229,1229,-137946
chr16:14401487-14401794	chr16	+	14401735	14401807	True	NR_029854,NM_001134477,NR_030177	chr16,chr16,chr16	+,-,+	MIR365-1,PARN,MIR193B	1334,322363,-3962
chr6:5004585-5005612	chr6	+	5004665	5005650	True	NM_001145115,NM_006638	chr6,chr6	+,-	PPP1R3G,RPP40	80069,-394
chr7:134325837-134327347	chr7	+	134326008	134327372	True	NM_001628,NM_001724,NM_199186	chr7,chr7,chr7	-,+,+	AKR1B1,BPGM,BPGM	-182120,4158,4158
chr7:27087434-27087841	chr7	+	27087641	27087813	True	NM_005522,NR_002795	chr7,chr7	-,+	HOXA1,HOXA11-AS1	47862,137213
chr22:39760290-39761230	chr22	+	39760348	39761253	True	NM_001033853,NM_145738	chr22,chr22	-,+	RPL3,SYNGR1	-44678,-224
chr1:182550194-182550707	chr1	+	182550334	182550512	True	NR_036490,NM_021133	chr1,chr1	+,-	LOC284648,RNASEL	33762,7932
chr17:76354270-76354542	chr17	+	76354302	76354450	True	NM_003955,NM_024419	chr17,chr17	-,+	SOCS3,PGS1	1758,20284
chr9:139739758-139739960	chr9	+	139739814	139739874	True	NM_003792,NM_206920,NM_014172,NM_001080482,NM_001135861	chr9,chr9,chr9,chr9,chr9	-,+,+,+,+	EDF1,MAMDC4,PHPT1,C9orf172,PHPT1	20914,6944,3381,-998,3381
chr4:8161355-8162817	chr4	+	8161474	8162650	True	NM_001130083,NM_001130087,NM_001130086,NM_001130085,NM_001130084,NM_001130088,NM_032432,NM_018986	chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4	-,-,-,-,-,-,-,+	ABLIM2,ABLIM2,ABLIM2,ABLIM2,ABLIM2,ABLIM2,ABLIM2,SH3TC1	-915,-915,-915,-915,-915,-915,-915,38409
chr2:180133980-180135401	chr2	+	180134030	180135131	True	NM_178123,NM_019091	chr2,chr2	-,+	SESTD1,PLEKHA3	-4680,-788883
chr19:36303698-36303979	chr19	+	36303720	36303966	True	NM_052948,NM_021232	chr19,chr19	+,-	ARHGAP33,PRODH2	-37354,285
chr17:16285246-16285474	chr17	+	16285255	16285505	True	NM_018955,NM_181716	chr17,chr17	+,-	UBB,CENPV	-939,-28443
chr17:16285246-16285474	chr17	+	21730932	21731381	False	NM_001113434,NR_028336	chr17,chr17	-,+	C17orf51,FAM27L	-275991,93988
chr22:43507456-43507827	chr22	+	43507586	43507844	True	NM_001197,NR_027779	chr22,chr22	+,-	BIK,TTLL1	-880,-22152
chr2:209131365-209132518	chr2	+	209131398	209132093	True	NM_015040,NM_005896,NM_152671,NM_001178000	chr2,chr2,chr2,chr2	+,-,+,+	PIKFYVE,IDH1,PIKFYVE,PIKFYVE	-458,-11592,-458,-458
chr22:30782326-30782802	chr22	+	30782376	30782760	True	NM_033382,NM_001017981	chr22,chr22	+,-	SEC14L2,RNF215	10169,592
chr11:125437602-125437895	chr11	+	125437674	125437908	True	NM_001007277,NM_022549,NM_004879	chr11,chr11,chr11	+,-,+	EI24,FEZ1,EI24	1389,-71468,1389
chrX:84362521-84364208	chrX	+	84362568	84364242	True	NM_001012980,NM_198450	chrX,chrX	-,+	SATL1,APOOL	50,-103721
chr1:21672358-21672643	chr1	+	21672483	21672559	True	NM_032264,NM_001113348	chr1,chr1	+,-	NBPF3,ECE1	94071,-449
chr16:77823071-77823356	chr16	+	77823078	77823382	True	NM_020927,NM_199355	chr16,chr16	+,-	VAT1L,ADAMTS18	-646,-354067
chr15:82555520-82556502	chr15	+	82555522	82556214	True	NM_024580,NM_001008226,NM_001040610	chr15,chr15,chr15	-,+,-	EFTUD1,FAM154B,EFTUD1	-418,-421,-418
chr2:190557673-190559078	chr2	+	190557871	190559103	True	NM_144708,NM_022353	chr2,chr2	+,-	ANKAR,OSGEPL1	-17220,68871
chr19:50472505-50472906	chr19	+	50472517	50472843	True	NM_001135163,NM_052884,NR_002825	chr19,chr19,chr19	-,-,+	SIGLEC11,SIGLEC11,SIGLEC16	-8088,-8088,68
chrX:106046062-106047536	chrX	+	106046110	106047537	True	NM_198881,NM_017752,NM_001171706	chrX,chrX,chrX	+,+,-	TBC1D8B,TBC1D8B,RIPPLY1	-242,-242,99081
chr12:7061929-7062638	chr12	+	7062023	7062310	True	NM_138425,NM_080548,NM_080549,NR_003010,NM_002831	chr12,chr12,chr12,chr12,chr12	+,+,+,-,+	C12orf57,PTPN6,PTPN6,SCARNA12,PTPN6	-8871,-6334,-1640,14510,-1640
chr15:40823067-40824217	chr15	+	40823201	40824265	True	NR_002208,NM_152260	chr15,chr15	-,+	MRPL42P5,RPUSD2	534,37271
chr1:67508732-67510587	chr1	+	67509303	67510625	True	NM_001077704,NM_015139	chr1,chr1	+,-	MIER1,SLC35D1	-113435,9505
chrX:21457994-21459260	chrX	+	21458165	21459306	True	NM_153270,NM_014927	chrX,chrX	-,+	KLHL34,CNKSR2	217192,-65693
chr10:119304137-119304413	chr10	+	119304205	119304397	True	NM_004098,NR_002791,NM_001165924	chr10,chr10,chr10	+,-,+	EMX2,EMX2OS,EMX2	-2300,232,-2300
chr1:155116725-155117185	chr1	+	155116815	155117022	True	NM_018973,NM_153741,NM_018845,NM_001122839,NM_001122837	chr1,chr1,chr1,chr1,chr1	-,-,+,+,+	DPM3,DPM3,SLC50A1,SLC50A1,SLC50A1	-3932,-3819,-8582,-8582,-8582
chr9:139581817-139582084	chr9	+	139581816	139582116	True	NR_029695,NM_006412,NM_001012727	chr9,chr9,chr9	+,-,-	MIR126,AGPAT2,AGPAT2	-16813,-11,-11
chr10:50393384-50393743	chr10	+	50393384	50393753	True	NM_001010863,NM_001135196	chr10,chr10	-,+	C10orf128,C10orf71	2709,113433
chr6:153045274-153046714	chr6	+	153045320	153046765	True	NM_025107,NM_003381,NM_182961	chr6,chr6,chr6	+,+,-	MYCT1,VIP,SYNE1	-26344,25167,-86786
chr6:8068396-8068782	chr6	+	8068563	8068815	True	NM_201280,NR_037616,NM_001199323,NM_001199322,NR_027712	chr6,chr6,chr6,chr6,chr6	-,-,-,-,+	MUTED,MUTED-TXNDC5,MUTED,MUTED,PIP5K1P1	-3916,-3916,-3916,-3916,-82279
chr8:104146044-104147905	chr8	+	104146262	104147924	True	NM_024812,NM_001024372,NR_027071	chr8,chr8,chr8	+,+,-	BAALC,BAALC,C8orf56	4996,4996,5696
chr12:10824076-10824841	chr12	+	10824175	10824845	True	NM_005042,NM_018423	chr12,chr12	+,-	PRH2,STYK1	256988,2096
chr6:167587403-167587912	chr6	+	167587515	167587842	True	NM_005299,NM_001145121	chr6,chr6	-,+	GPR31,TCP10L2	-16196,-3485
chr17:34799116-34799326	chr17	+	34799217	34799299	True	NM_001040282,NM_004773,NM_001001418	chr17,chr17,chr17	-,+,-	TBC1D3G,ZNHIT3,TBC1D3C	8854,43173,8842
chr17:34799116-34799326	chr17	+	34748166	34748248	False	NM_001123392,NM_004773	chr17,chr17	-,+	TBC1D3H,ZNHIT3	8852,94224
chr16:57836556-57837112	chr16	+	57836731	57837090	True	NM_001130099,NM_001130100,NM_005550,NM_005886	chr16,chr16,chr16,chr16	-,-,-,+	KIFC3,KIFC3,KIFC3,KATNB1	-4802,-292,-292,-67122
chrX:27998861-27999305	chrX	+	27998866	27999296	True	NM_182506,NM_001017930	chrX,chrX	+,-	MAGEB10,DCAF8L1	-172810,320
chr19:4541012-4541660	chr19	+	4541281	4541709	True	NM_052972,NM_032631,NM_001013706	chr19,chr19,chr19	-,+,-	LRG1,HDGFRP2,PLIN5	-1245,-69077,-6073
chr11:18127674-18128363	chr11	+	18127753	18128377	True	NR_026576,NM_138421,NM_054031	chr11,chr11,chr11	-,-,+	SAA3P,SAAL1,MRGPRX3	9352,-115,14124
chr3:48757734-48758449	chr3	+	48757901	48758129	True	NM_001005910,NM_001005911,NR_027437,NR_027438,NM_001146178,NM_001146179,NM_006321,NM_001190317,NM_001190316,NM_001005909,NM_016291	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,-,-,+,-,-,-,-	IP6K2,IP6K2,IP6K2,IP6K2,IP6K2,IP6K2,ARIH2,IP6K2,IP6K2,IP6K2,IP6K2	-3190,-3190,-3190,-3190,-3190,-3190,198151,-3190,-3190,-3190,-3190
chr4:185721650-185721880	chr4	+	185721650	185721920	True	NR_003542,NM_152683	chr4,chr4	-,+	SLED1,CCDC111	-1450,-150934
chr14:92507623-92507904	chr14	+	92507669	92507914	True	NM_004239,NM_017437	chr14,chr14	-,+	TRIP11,CPSF2	-1266,80383
chr1:917164-917451	chr1	+	917326	917500	True	NR_027693,NM_032129	chr1,chr1	-,+	C1orf170,PLEKHN1	23,-15500
chr12:105628917-105629192	chr12	+	105628920	105629206	True	NM_018171,NM_001145199	chr12,chr12	-,+	APPL2,C12orf75	852,95207
chr1:154934584-154934908	chr1	+	154934734	154934902	True	NM_001826,NM_183001,NM_020524,NM_138300,NM_001130040	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	CKS1B,SHC1,PBXIP1,PYGO2,SHC1	12215,8371,-6167,-476,8371
chr3:121635758-121636255	chr3	+	121636020	121636264	True	NM_021082,NM_001023571	chr3,chr3	+,-	SLC15A2,IQCB1	-22913,-82094
chr7:90896171-90896642	chr7	+	90896191	90896572	True	NM_006980,NM_003505	chr7,chr7	-,+	MTERF,FZD1	613494,-2459
chr12:20553645-20553946	chr12	+	20553702	20553993	True	NM_000921,NM_021094	chr12,chr12	+,-	PDE3A,SLCO1A2	-31570,933889
chr15:90232238-90233081	chr15	+	90232263	90233047	True	NM_001145311,NM_003847,NM_020212,NM_002666	chr15,chr15,chr15,chr15	-,-,+,-	PLIN1,PEX11A,WDR93,PLIN1	-9615,969,980,-9615
chr17:37559525-37559816	chr17	+	37559769	37559839	True	NM_001184906,NM_015083,NM_032875	chr17,chr17,chr17	-,+,-	FBXL20,CDK12,FBXL20	-1860,57899,-1860
chr8:132913594-132914060	chr8	+	132913600	132914081	True	NM_015137,NM_001080399	chr8,chr8	+,-	EFR3A,OC90	2274,157596
chr10:7859702-7860348	chr10	+	7859754	7860254	True	NM_012311,NM_031923	chr10,chr10	-,+	KIN,TAF3	-29810,418
chr20:31799963-31801289	chr20	+	31799989	31801315	True	NM_001042439,NM_178466,NM_016082	chr20,chr20,chr20	+,+,-	C20orf71,C20orf71,CDK5RAP1	3819,3819,188072
chr7:100334231-100334699	chr7	+	100334278	100334698	True	NM_173059,NM_003386,NM_022574	chr7,chr7,chr7	+,+,-	ZAN,ZAN,GIGYF1	-3080,-3080,-47408
chr7:130368530-130369741	chr7	+	130368595	130369779	True	NR_029899,NM_052933	chr7,chr7	+,-	MIR335,TSGA13	-232706,1677
chr20:21380063-21380687	chr20	+	21380239	21380742	True	NM_012255,NM_033176	chr20,chr20	+,-	XRN2,NKX2-4	-96359,-2192
chr13:21625987-21627095	chr13	+	21626229	21627039	True	NM_014572,NM_005870	chr13,chr13	-,+	LATS2,SAP18	8733,87613
chr17:17682022-17682500	chr17	+	17682047	17682477	True	NM_030665,NR_024007	chr17,chr17	+,-	RAI1,SMCR5	-97311,416
chr6:64033246-64033767	chr6	+	64033279	64033678	True	NM_001143940,NM_016571,NM_003463	chr6,chr6,chr6	-,-,+	LGSN,LGSN,PTP4A1	-3397,-3397,248241
chr10:44067097-44069084	chr10	+	44067503	44068980	True	NM_001099284,NM_001099283,NM_001099282,NM_145312,NM_005674	chr10,chr10,chr10,chr10,chr10	-,-,-,+,-	ZNF239,ZNF239,ZNF239,ZNF485,ZNF239	1143,1143,1142,32874,-3596
chr9:112261688-112262021	chr9	+	112261719	112262047	True	NM_001145368,NM_002829,NM_001037293	chr9,chr9,chr9	-,-,+	PTPN3,PTPN3,PALM2	-1126,-1126,141020
chrX:23354219-23354570	chrX	+	23354223	23354563	True	NM_173495,NM_001033583	chrX,chrX	+,-	PTCHD1,ACOT9	-1289,406894
chr12:123011755-123012282	chr12	+	123011773	123012257	True	NR_036436,NM_014708,NR_036434,NR_036435,NM_023012	chr12,chr12,chr12,chr12,chr12	-,+,-,-,-	RSRC2,KNTC1,RSRC2,RSRC2,RSRC2	-213,-15,-213,-213,-213
chr10:25464182-25464442	chr10	+	25464187	25464307	True	NM_020752,NR_027333	chr10,chr10	+,-	GPR158,LOC100128811	-13,954
chr19:20012753-20013292	chr19	+	20012976	20013070	True	NM_001145404,NM_031218	chr19,chr19	-,+	ZNF506,ZNF93	-80416,-1313
chr17:72970970-72971404	chr17	+	72970992	72971245	True	NM_014603,NM_030630	chr17,chr17	+,-	CDR2L,C17orf28	12481,-2092
chr10:5855183-5855455	chr10	+	5855270	5855402	True	NM_001115156,NM_001494,NM_178150	chr10,chr10,chr10	-,-,+	GDI2,GDI2,FBXO18	160,160,76811
chr3:101575187-101576711	chr3	+	101575500	101576727	True	NM_000986,NM_031419	chr3,chr3	-,+	RPL24,NFKBIZ	-169937,-7201
chr14:24048123-24048440	chr14	+	24048309	24048431	True	NM_001146028,NR_023314,NM_032452	chr14,chr14,chr14	-,+,-	JPH4,THTPA,JPH4	-300,-23162,-300
chr1:48292928-48293682	chr1	+	48292943	48293584	True	NM_001194986,NM_004474	chr1,chr1	-,+	LOC388630,FOXD2	169028,-391305
chr15:37390410-37390806	chr15	+	37390471	37390730	True	NM_170674,NM_170675,NM_170676,NM_170677,NM_172315,NM_172316,NM_002399,NM_032499	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,-,-,-,-,-,+	MEIS2,MEIS2,MEIS2,MEIS2,MEIS2,MEIS2,MEIS2,C15orf41	2029,2029,2029,2029,32,922,2825,-457716
chr1:161197388-161198045	chr1	+	161197607	161197955	True	NM_001643,NM_032174	chr1,chr1	-,+	APOA2,TOMM40L	-4189,-1832
chr1:95298825-95300131	chr1	+	95298926	95299853	True	NM_152369,NM_001839	chr1,chr1	+,-	SLC44A3,CNN3	-12877,92934
chr7:100237794-100238794	chr7	+	100237913	100238457	True	NM_003227,NM_023948	chr7,chr7	-,+	TFR2,MOSPD3	766,-27850
chr19:44139722-44140504	chr19	+	44139721	44140533	True	NM_001145641,NM_145296	chr19,chr19	+,-	SRRM5,CADM4	-23519,3508
chr17:73850721-73851074	chr17	+	73850741	73850989	True	NM_012478,NM_199242,NM_001080419	chr17,chr17,chr17	-,-,+	WBP2,UNC13D,UNK	562,-9943,-70113
chr1:35259932-35260162	chr1	+	35259948	35260146	True	NM_001164824,NM_002060	chr1,chr1	-,+	C1orf212,GJA4	64550,-1400
chr6:35744587-35745073	chr6	+	35744770	35744872	True	NM_001010886,NM_207409,NM_001832	chr6,chr6,chr6	+,+,-	C6orf127,C6orf126,CLPS	3958,-429,20280
chr9:90341876-90342182	chr9	+	90342022	90342212	True	NM_001039803,NM_145918,NM_001912	chr9,chr9,chr9	-,+,+	CDK20,CTSL1,CTSL1	247533,-1099,-1099
chr17:72462232-72462520	chr17	+	72462235	72462313	True	NM_174892,NM_007261	chr17,chr17	-,+	CD300LB,CD300A	65350,208
chr10:105885682-105886499	chr10	+	105885777	105886548	True	NM_000494,NM_145247,NM_001002759	chr10,chr10,chr10	-,+,+	COL17A1,MEIR5,MEIR5	-40139,-4015,-3902
chr12:57632871-57633085	chr12	+	57632875	57633117	True	NM_005412,NM_020142,NR_029415,NR_029416,NR_029417,NM_001166358,NM_001166359,NM_001166356,NM_001166357	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,-,+,+,+,+,+,+,+	SHMT2,NDUFA4L2,SHMT2,SHMT2,SHMT2,SHMT2,SHMT2,SHMT2,SHMT2	-9570,1408,-8815,-9098,-9570,-9098,-8815,-9570,-8783
chr8:37452646-37454015	chr8	+	37452730	37454024	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	99276,151590
chr14:92981266-92981508	chr14	+	92981272	92981556	True	NM_001008530,NM_024832	chr14,chr14	-,+	LGMN,RIN3	233541,-1198
chr8:146023177-146023571	chr8	+	146023327	146023567	True	NM_000973,NM_033301,NM_213605	chr8,chr8,chr8	-,-,+	RPL8,RPL8,ZNF517	-5522,-5598,693
chr9:131418412-131418692	chr9	+	131418530	131418689	True	NM_001122821,NM_052844	chr9,chr9	+,-	SET,WDR34	27244,490
chr15:63454177-63454538	chr15	+	63454248	63454316	True	NM_016530,NM_015920	chr15,chr15	+,-	RAB8B,RPS27L	27411,-4507
chr4:77996234-77996435	chr4	+	77996276	77996416	True	NM_004354,NM_006835	chr4,chr4	+,-	CCNG2,CCNI	81940,759
chr1:218518884-218519452	chr1	+	218518908	218519358	True	NM_003238,NM_018040,NM_001135599	chr1,chr1,chr1	+,-,+	TGFB2,GPATCH2,TGFB2	-283,-714499,-283
chr3:153839285-153839559	chr3	+	153839306	153839602	True	NR_037901,NM_015595	chr3,chr3	-,+	LOC100507524,ARHGEF26	-307,-208
chr21:38580579-38580810	chr21	+	38580592	38580680	True	NM_006052,NR_026719	chr21,chr21	-,+	DSCR3,DSCR9	59203,274
chr15:40640591-40641486	chr15	+	40640844	40641516	True	NM_001145643,NM_207380,NM_033510	chr15,chr15,chr15	+,-,+	PHGR1,C15orf52,DISP2	1717,-7676,8917
chr7:56021437-56022280	chr7	+	56021578	56022143	True	NM_015969,NM_207366	chr7,chr7	+,-	MRPS17,SEPT14	-2018,-91096
chr11:77350117-77350532	chr11	+	77350381	77350495	True	NM_173039,NM_001293	chr11,chr11	+,-	AQP11,CLNS1A	-49752,-1530
chr2:74679225-74681207	chr2	+	74679642	74680670	True	NM_001015055,NM_031288,NM_012477,NR_037849	chr2,chr2,chr2,chr2	-,+,+,+	RTKN,INO80B,WBP1,INO80B-WBP1	-10582,1479,4856,1479
chr20:54580951-54581345	chr20	+	54581086	54581386	True	NM_080617,NM_019888	chr20,chr20	-,+	CBLN4,MC3R	-1074,242401
chr4:5990523-5991131	chr4	+	5990531	5991178	True	NR_037863,NM_001014809	chr4,chr4	+,-	LOC285484,CRMP1	211281,-95746
chr17:80273664-80274316	chr17	+	80273759	80274299	True	NM_207459,NM_006137	chr17,chr17	+,-	TEX19,CD7	42823,1231
chr1:9967656-9968522	chr1	+	9967669	9967997	True	NM_022787,NM_001012329,NM_020248	chr1,chr1,chr1	+,-,-	NMNAT1,CTNNBIP1,CTNNBIP1	35488,2370,2370
chr8:109455453-109455821	chr8	+	109455452	109455842	True	NM_001568,NM_014673	chr8,chr8	-,+	EIF3E,TTC35	-194493,10
chr11:1328235-1328484	chr11	+	1328336	1328484	True	NM_019009,NR_029409	chr11,chr11	-,+	TOLLIP,LOC255512	2458,2453
chr6:57037696-57038172	chr6	+	57037725	57038213	True	NM_183227,NM_004282	chr6,chr6	-,+	RAB23,BAG2	48094,-673
chr19:51567248-51567468	chr19	+	51567298	51567373	True	NM_015596,NM_014441	chr19,chr19	-,+	KLK13,SIGLEC9	1045,60763
chr4:142142466-142144174	chr4	+	142142584	142144072	True	NM_020724,NM_014487	chr4,chr4	-,+	RNF150,ZNF330	-87968,-588
chr19:10449339-10449775	chr19	+	10449342	10449740	True	NM_002162,NM_133452,NM_003259	chr19,chr19,chr19	-,-,+	ICAM3,RAVER1,ICAM5	655,-5028,-48738
chr15:68118310-68118559	chr15	+	68118425	68118583	True	NM_001031807,NM_001031733	chr15,chr15	+,-	SKOR1,CALML4	-535,379915
chr6:33253459-33254597	chr6_qbl_hap6	+	4485833	4486719	False	NM_014260,NM_001185181,NM_003782,NM_001164267,NM_005452	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	+,+,+,-,-	PFDN6,PFDN6,B3GALT4,WDR46,WDR46	2901,2935,-8731,2878,2878
chr6:33253459-33254597	chr6_mcf_hap5	+	4727335	4728221	False	NM_014260,NM_003782,NM_001164267,NM_005452	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	+,+,-,-	PFDN6,B3GALT4,WDR46,WDR46	2900,-8698,2877,2877
chr6:33253459-33254597	chr6_cox_hap2	+	4698066	4698290	False	NM_014260,NM_003782,NM_001164267,NM_005452	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,+,-,-	PFDN6,B3GALT4,WDR46,WDR46	2901,-9397,2878,2878
chr6:33253459-33254597	chr6	+	33253591	33254477	True	NM_014260,NM_001185181,NM_003782,NM_001164267,NM_005452	chr6,chr6,chr6,chr6,chr6	+,+,+,-,-	PFDN6,PFDN6,B3GALT4,WDR46,WDR46	2900,2934,-8728,2877,2877
chr6:33253459-33254597	chr6_dbb_hap3	+	4535578	4535802	False	NM_014260,NM_003782,NM_001164267,NM_005452	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	+,+,-,-	PFDN6,B3GALT4,WDR46,WDR46	2901,-9397,2878,2878
chr7:149534845-149535322	chr7	+	149534889	149535331	True	NM_001099220,NR_027040	chr7,chr7	+,-	ZNF862,LOC401431	177,35670
chr17:48962398-48964015	chr17	+	48962895	48964032	True	NM_005749,NM_175575	chr17,chr17	-,+	TOB1,WFIKKN2	-21482,-50342
chr9:102587122-102587433	chr9	+	102587229	102587476	True	NM_173199,NM_015051,NM_173200,NM_006981	chr9,chr9,chr9,chr9	+,-,+,+	NR4A3,ERP44,NR4A3,NR4A3	-3143,273913,1532,-3143
chr21:30471651-30472124	chr21	+	30471823	30472056	True	NM_020152,NM_006585	chr21,chr21	+,-	C21orf7,CCT8	-19010,-25813
chr9:113331658-113332421	chr9	+	113331884	113332458	True	NM_001166280,NM_153366	chr9,chr9	+,-	MUSK,SVEP1	98592,9752
chr5:114938141-114939337	chr5	+	114938351	114939159	True	NM_021649,NM_001284	chr5,chr5	-,+	TICAM2,AP3S1	-175,238459
chr2:191878076-191878664	chr2	+	191878290	191878622	True	NM_139266,NM_014905,NM_007315	chr2,chr2,chr2	-,+,-	STAT1,GLS,STAT1	404,-132794,404
chr6:111418810-111419228	chr6	+	111418977	111419149	True	NM_018593,NR_002932	chr6,chr6	+,-	SLC16A10,GSTM2P1	-10253,-50220
chr6:66258506-66259045	chr6	+	66258546	66258952	True	NR_026540,NM_198283	chr6,chr6	+,-	MCART3P,EYS	238819,30795
chr14:103785221-103785575	chr14	+	103785236	103785480	True	NR_033938,NM_001969	chr14,chr14	-,+	LOC100131366,EIF5	-129871,15012
chr19:58036598-58037716	chr19	+	58036920	58037485	True	NM_001199295,NM_001039654,NM_153263	chr19,chr19,chr19	+,-,+	ZNF549,ZNF550,ZNF549	1207,30301,1207
chr21:45208463-45208774	chr21	+	45208466	45208670	True	NM_000100,NM_003683	chr21,chr21	-,+	CSTB,RRP1	-12207,747
chr7:45613535-45613810	chr7	+	45613775	45613841	True	NM_021116,NR_024271	chr7,chr7	+,-	ADCY1,SEPT7P2	283,194826
chr11:117746690-117747133	chr11	+	117746826	117746990	True	NM_001164837,NM_001204268,NM_022003,NM_001164832,NM_001164831,NM_001164836,NR_037907,NM_001558	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,-,-,-,+	FXYD6,FXYD6-FXYD2,FXYD6,FXYD6,FXYD6,FXYD6,FXYD6-FXYD2,IL10RA	806,806,806,806,1261,806,806,110115
chr19:43379664-43380493	chr19	+	43379986	43380522	True	NM_001184826,NM_006905,NR_036584,NM_001184825	chr19,chr19,chr19,chr19	-,-,+,-	PSG1,PSG1,LOC100289650,PSG1	3399,3399,-54022,3399
chr16:72201072-72202602	chr16	+	72201072	72202640	True	NM_001160213,NM_031293,NM_014003	chr16,chr16,chr16	-,-,+	PMFBP1,PMFBP1,DHX38	3759,3474,-73508
chr2:27631975-27632245	chr2	+	27632038	27632294	True	NM_177983,NM_013392	chr2,chr2	-,+	PPM1G,NRBP1	252,19178
chr9:46383447-46385228	chr9	+	46383775	46385071	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2753045,302494
chr9:46383447-46385228	chr9	-	46119983	46120537	False	NM_001145196,NR_024060	chr9,chr9	-,+	FAM75A6,FAM27A	-2489253,-393005
chr10:12875186-12876235	chr10	+	12875218	12876167	True	NR_027322,NM_031455	chr10,chr10	+,-	LOC283070,CCDC3	-136,167587
chr22:24304880-24306158	chr22	+	24305123	24306197	True	NM_001080843,NM_000854,NM_001084393	chr22,chr22,chr22	-,-,+	GSTT2B,GSTT2,DDTL	-1755,-1730,2828
chr22:24304880-24306158	chr22	-	24319509	24320583	False	NM_001355,NM_000854,NM_001084392	chr22,chr22,chr22	-,+,-	DDT,GSTT2,DDT	1488,1730,-2829
chr1:20127324-20128174	chr1	+	20127541	20128166	True	NM_015207,NM_181719	chr1,chr1	+,-	OTUD3,TMCO4	80721,-1131
chr19:56988961-56989172	chr19	+	56988994	56989204	True	NR_036521,NR_036522,NM_022103,NR_030740	chr19,chr19,chr19,chr19	+,+,-,-	LOC100128252,LOC100128252,ZNF667,ZNF667	38,288,-224,-224
chr7:151573964-151574355	chr7	+	151574058	151574326	True	NM_145292,NM_016203	chr7,chr7	+,-	GALNTL5,PRKAG2	79137,40
chr9:72889290-72890982	chr9	+	72889290	72891027	True	NM_001206,NM_015110	chr9,chr9	-,+	KLF9,SMC5	138605,-15466
chr19:45029634-45030197	chr19	+	45029912	45030169	True	NM_001102598,NM_001102599,NM_001205280,NM_001102600,NM_001102597	chr19,chr19,chr19,chr19,chr19	-,-,+,-,-	CEACAM20,CEACAM20,LOC147710,CEACAM20,CEACAM20	3436,3436,86770,3436,3436
chr14:60266448-60267410	chr14	+	60266540	60266966	True	NM_021136,NM_022495	chr14,chr14	-,+	RTN1,C14orf135	70645,291662
chr19:52264427-52265631	chr19	+	52264507	52265303	True	NM_002029,NM_001462,NM_001193306,NM_001005738	chr19,chr19,chr19,chr19	-,+,-,+	FPR1,FPR2,FPR1,FPR2	-9357,1338,-9357,-112
chr21:19257743-19259319	chr21	+	19257747	19259350	True	NM_001204175,NR_024354	chr21,chr21	+,-	CHODL,NCRNA00157	30306,-160
chr5:175670656-175672017	chr5	+	175670922	175671624	True	NR_036494,NM_198567	chr5,chr5	-,+	LOC643201,C5orf25	-44624,-5604
chr5:175670656-175672017	chr5	-	177093165	177093736	False	NR_026921,NM_007255	chr5,chr5	-,+	LOC202181,B4GALT7	5593,-66106
chr19:55107032-55107334	chr19	+	55107160	55107229	True	NM_006863,NM_145057	chr19,chr19	+,-	LILRA1,CDC42EP5	-2098,-122738
chr5:68627854-68628464	chr5	+	68627854	68628430	True	NM_176816,NM_133343	chr5,chr5	-,+	CCDC125,RAD17	-11444,36693
chr10:46223230-46223902	chr10	+	46223246	46223908	True	NM_174890,NM_015262,NM_001169106,NM_001169107	chr10,chr10,chr10,chr10	-,+,+,+	ANUBL1,FAM21C,FAM21C,FAM21C	-54995,-649,-649,-649
chr10:46223230-46223902	chr10	+	51828246	51828847	False	NM_018232,NM_001005751,NM_001143974	chr10,chr10,chr10	+,+,-	FAM21B,FAM21A,ASAH2	9038,-613,179574
chr22:37499974-37500630	chr22	+	37500059	37500679	True	NM_024681,NM_153609	chr22,chr22	+,-	KCTD17,TMPRSS6	-52338,-366
chr20:4802825-4803033	chr20	+	4802851	4803059	True	NM_012409,NM_170774,NM_014737	chr20,chr20,chr20	+,-,-	PRND,RASSF2,RASSF2	-100346,-7082,1282
chr19:35167569-35168221	chr19	+	35167578	35168234	True	NM_018443,NM_001012320,NM_001025591	chr19,chr19,chr19	+,+,-	ZNF302,ZNF302,SCGBL	332,332,-82088
chr5:180670928-180671186	chr5	+	180670967	180671179	True	NR_002592,NM_006098,NR_002591,NM_201627	chr5,chr5,chr5,chr5	-,-,-,+	SNORD96A,GNB2L1,SNORD95,TRIM41	-2078,-61,-591,-20712
chr11:34946061-34946460	chr11	+	34946137	34946484	True	NM_015957,NM_003477,NM_001166158,NM_001135024	chr11,chr11,chr11,chr11	-,+,+,+	APIP,PDHX,PDHX,PDHX	-8198,-8518,-8518,-8518
chr7:73152392-73152743	chr7	+	73152461	73152753	True	NM_148912,NM_148913,NR_026910,NR_026912,NR_026690,NM_001145364	chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,+,-	ABHD11,ABHD11,ABHD11,ABHD11,WBSCR26,ABHD11	481,481,481,487,-3118,481
chr7:76751287-76751569	chr7	+	76751552	76751614	True	NM_020879,NM_006682	chr7,chr7	+,-	CCDC146,FGL2	319,77586
chr7:123368615-123369855	chr7	+	123368862	123369865	True	NM_207163,NM_003941	chr7,chr7	+,-	LMOD2,WASL	-73052,19314
chr7:100318973-100319564	chr7	+	100319021	100319613	True	NM_000799,NM_022574	chr7,chr7	+,-	EPO,GIGYF1	-649,-32151
chr4:166127347-166128505	chr4	+	166127577	166128463	True	NM_001161522,NM_007246,NM_001161521,NR_026575	chr4,chr4,chr4,chr4	+,+,+,-	KLHL2,KLHL2,KLHL2,GK3P	2707,306,2707,72762
chr17:27181557-27182691	chr17	+	27181697	27182725	True	NR_029685,NR_029970,NM_005702	chr17,chr17,chr17	-,-,+	MIR144,MIR451,ERAL1	5961,5783,27
chr2:107137180-107137713	chr2	+	107137524	107137728	True	NM_001144013,NR_003506	chr2,chr2	-,+	RGPD3,PLGLA	-52723,-134810
chr11:47923999-47925731	chr11	+	47924409	47925716	True	NM_015231,NM_001098503	chr11,chr11	-,+	NUP160,PTPRJ	-54352,76393
chr19:1351764-1353420	chr19	+	1351809	1353277	True	NR_024247,NM_000156,NM_032853	chr19,chr19,chr19	+,-,+	MUM1,GAMT,MUM1	3045,48325,1698
chr20:55177710-55178720	chr20	+	55177969	55178533	True	NM_080615,NM_003222	chr20,chr20	-,+	GCNT7,TFAP2C	-76988,25824
chr17:43130995-43131706	chr17	+	43131297	43131540	True	NM_021079,NM_001128631,NM_024819	chr17,chr17,chr17	+,-,-	NMT1,DCAKD,DCAKD	7139,-2319,6984
chrX:52986389-52987271	chrX	+	52986615	52987267	True	NM_014138,NM_001099684	chrX,chrX	-,-	FAM156A,FAM156B	-439,-986
chrX:52986389-52987271	chrX	-	52926770	52927422	False	NM_014138,NM_133179,NM_001099684	chrX,chrX,chrX	+,-,+	FAM156A,XAGE3,FAM156B	439,-29651,986
chr6:31166717-31168569	chr6_dbb_hap3	+	2465585	2465669	False	NR_026816,NR_026791	chr6_dbb_hap3,chr6_dbb_hap3	-,+	PSORS1C3,HCG27	-22767,-2967
chr6:31166717-31168569	chr6	+	31168445	31168529	True	NR_026816,NR_026791	chr6,chr6	-,+	PSORS1C3,HCG27	-22769,-2967
chr6:31166717-31168569	chr6_ssto_hap7	+	2503390	2503474	False	NR_026816,NR_026791	chr6_ssto_hap7,chr6_ssto_hap7	-,+	PSORS1C3,HCG27	-22760,-2967
chr6:31166717-31168569	chr6_cox_hap2	+	2683218	2683302	False	NR_026816,NR_026791	chr6_cox_hap2,chr6_cox_hap2	-,+	PSORS1C3,HCG27	-22771,-2967
chr22:31088840-31090106	chr22	+	31089081	31090072	True	NM_152511,NM_030758	chr22,chr22	-,+	DUSP18,OSBP2	-25209,720
chr1:28832136-28832507	chr1	+	28832242	28832554	True	NR_002909,NR_030725,NR_030726,NR_036473,NM_001048199,NR_003077	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-	SNHG3,RCC1,RCC1,SNHG3,RCC1,SNORD99	-46,-46,-46,-46,-46,72830
chr8:95565247-95565709	chr8	+	95565284	95565638	True	NM_183009,NM_015496,NM_001034915	chr8,chr8,chr8	-,-,+	KIAA1429,KIAA1429,ESRP1	158,158,87725
chr22:24108730-24109378	chr22	+	24108982	24109426	True	NM_213720,NM_182520,NM_005940	chr22,chr22,chr22	-,+,+	CHCHD10,C22orf15,MMP11	765,-3825,5609
chr1:37500621-37500857	chr1	+	37500846	37500906	True	NR_036217,NM_000831	chr1,chr1	+,-	MIR4255,GRIK3	126257,-1002
chrX:48429522-48430341	chrX	+	48430125	48430243	True	NM_006743,NM_033518	chrX,chrX	+,-	RBM3,SLC38A5	2592,-101481
chr11:33284709-33284951	chr11	+	33284731	33284862	True	NM_001033506,NM_001048200,NM_005734	chr11,chr11,chr11	-,+,+	CSTF3,HIPK3,HIPK3	-101694,-5614,-5614
chr11:67353608-67353972	chr11	+	67353622	67353908	True	NM_000852,NR_033791	chr11,chr11	+,-	GSTP1,DOC2GP	-2607,29277
chr9:108457201-108458691	chr9	+	108457358	108458302	True	NM_018112,NM_005502	chr9,chr9	+,-	TMEM38B,ABCA1	-584,-766831
chr10:105035697-105036327	chr10	+	105035732	105036174	True	NM_032727,NM_001011663	chr10,chr10	+,-	INA,PCGF6	745,74767
chr17:65714112-65714323	chr17	+	65714119	65714323	True	NM_015462,NM_181655	chr17,chr17	+,-	NOL11,C17orf58	-109,275492
chr8:57287730-57288106	chr8	+	57287861	57288017	True	NM_138969,NM_024300	chr8,chr8	-,+	SDR16C5,CHCHD7	-54620,-163607
chr17:6542416-6543161	chr17	+	6542452	6543180	True	NM_014804,NM_032731	chr17,chr17	-,+	KIAA0753,TXNDC17	1117,1041
chr7:53869160-53870769	chr7	+	53869352	53870822	True	NM_182546,NR_004422	chr7,chr7	+,-	VSTM2A,HPVC1	739196,399349
chr16:48180284-48180662	chr16	+	48180372	48180682	True	NM_033226,NM_031490	chr16,chr16	-,+	ABCC12,LONP2	49,97528
chr17:47076654-47076997	chr17	+	47076668	47076997	True	NM_004123,NM_006546,NM_001160423	chr17,chr17,chr17	-,+,+	GIP,IGF2BP1,IGF2BP1	-30713,-1950,-1950
chr3:43666748-43667949	chr3	+	43666751	43667412	True	NM_016006,NM_001204832,NM_001204834,NM_001204831,NM_018075,NM_001204833	chr3,chr3,chr3,chr3,chr3,chr3	+,-,-,-,-,-	ABHD5,ANO10,ANO10,ANO10,ANO10,ANO10	64962,-3191,-3191,-3191,-3191,-3191
chr17:72199833-72200125	chr17	+	72199833	72200079	True	NM_000999,NR_026914,NM_032646,NM_001035258	chr17,chr17,chr17,chr17	+,-,+,+	RPL38,MGC16275,TTYH2,RPL38	-89,9431,9616,-89
chr12:60164042-60165036	chr12	+	60164064	60165068	True	NM_004731,NM_153377	chr12,chr12	+,-	SLC16A7,LRIG3	-81003,-849802
chr6:55052133-55052665	chr6	+	55052262	55052589	True	NM_001526,NM_001042406	chr6,chr6	+,-	HCRTR2,HMGCLL1	-13250,391483
chr1:160145814-160147751	chr1	+	160145890	160147670	True	NM_052868,NM_001001734	chr1,chr1	-,+	IGSF8,ATP1A4	-77482,4
chr3:16975413-16976148	chr3	+	16975577	16976191	True	NM_015184,NM_001351,NR_037465	chr3,chr3,chr3	+,-,+	PLCL2,DAZL,MIR3714	-1046,-328571,-940
chr7:105754223-105754694	chr7	+	105754240	105754582	True	NM_152750,NM_006754,NM_182715	chr7,chr7,chr7	+,-,-	CDHR3,SYPL1,SYPL1	-150634,-1183,-1482
chr12:118540532-118540947	chr12	+	118540539	118540978	True	NM_002567,NM_019086	chr12,chr12	+,-	PEBP1,VSIG10	32891,882
chr1:84415100-84416954	chr1	+	84415393	84416754	True	NM_207578,NM_024686	chr1,chr1	+,-	PRKACB,TTLL7	126990,48129
chr17:39600289-39600886	chr17	+	39600339	39600847	True	NM_030975,NM_006771	chr17,chr17	+,-	KRTAP9-9,KRT38	-188754,-2743
chr18:14968728-14969740	chr18	+	14968990	14969728	True	NR_027417,NR_036153	chr18,chr18	-,+	LOC644669,MIR3156-2	356240,-138876
chr2:102004238-102004841	chr2	+	102004243	102004425	True	NM_017546,NM_153836	chr2,chr2	+,-	C2orf29,CREG2	-134949,-278
chr9:116832490-116832755	chr9	+	116832528	116832738	True	NM_032888,NM_001633	chr9,chr9	+,-	COL27A1,AMBP	85492,8064
chr1:47395407-47396552	chr1	+	47395690	47396202	True	NM_000778,NM_178033	chr1,chr1	-,+	CYP4A11,CYP4X1	11004,93037
chr1:47395407-47396552	chr1	-	47614403	47614453	False	NM_005764,NM_001010969	chr1,chr1	-,+	PDZK1IP1,CYP4A22	41368,-11347
chr16:2794899-2796112	chr16	+	2795068	2796102	True	NM_016333,NR_027274,NR_027275	chr16,chr16,chr16	+,-,-	SRRM2,LOC100128788,LOC100128788	6227,-270,6549
chr6:36841886-36842396	chr6	+	36841885	36842227	True	NM_152734,NM_016059	chr6,chr6	+,-	C6orf89,PPIL1	11412,623
chrX:70432948-70433407	chrX	+	70433070	70433304	True	NM_000166,NM_001097642,NM_201599	chrX,chrX,chrX	+,+,-	GJB1,GJB1,ZMYM3	9751,1757,40784
chr9:39291392-39291931	chr9	+	39291754	39291832	True	NM_033655,NM_001085452	chr9,chr9	-,+	CNTNAP3,FAM75A1	-3454,63866
chr9:39291392-39291931	chr9	+	39820998	39821076	False	NR_003528,NM_001085452	chr9,chr9	-,+	LOC653501,FAM75A1	-356472,63898
chr19:3625882-3626368	chr19	+	3625955	3626335	True	NM_021231,NM_001080543,NM_133261	chr19,chr19,chr19	-,-,+	C19orf29,C19orf29,GIPC3	528,528,-40437
chr3:141496422-141496872	chr3	+	141496436	141496836	True	NM_001178140,NM_139209	chr3,chr3	-,+	TFDP2,GRK7	222443,206
chr14:100533884-100535724	chr14	+	100533967	100535725	True	NM_016337,NM_206918	chr14,chr14	+,-	EVL,DEGS2	-2268,90337
chr9:127211694-127212217	chr9	+	127211698	127212214	True	NM_002799,NM_001161808	chr9,chr9	-,+	PSMB7,GPR144	-33977,1208
chr12:12964920-12965615	chr12	+	12965012	12965464	True	NM_016355,NM_201224,NM_006143	chr12,chr12,chr12	+,+,-	DDX47,DDX47,GPR19	815,815,-115891
chr2:73461182-73461398	chr2	+	73461202	73461396	True	NM_001009570,NM_006429,NM_001166284,NM_001166285,NR_029403,NR_029402,NM_032319	chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,+,+,-	CCT7,CCT7,CCT7,CCT7,CCT7,CCT7,C2orf7	-15,-15,-15,-15,-15,-15,-846
chr6:165520710-165521656	chr6	+	165520784	165521430	True	NM_144980,NR_027284	chr6,chr6	-,+	C6orf118,LOC441177	201731,879608
chr3:125803188-125803548	chr3	+	125803266	125803556	True	NM_017836,NM_001008486,NM_001008485,NM_001012337	chr3,chr3,chr3,chr3	-,-,-,+	SLC41A3,SLC41A3,SLC41A3,ROPN1B	-132,-132,-132,-115289
chr2:201389483-201390430	chr2	+	201389507	201390414	True	NM_001160033,NM_152524,NM_152387,NM_001160046	chr2,chr2,chr2,chr2	+,+,-,+	SGOL2,SGOL2,KCTD18,SGOL2	450,450,-14715,450
chr19:8456401-8456736	chr19	+	8456411	8456683	True	NM_198471,NM_004218	chr19,chr19	-,+	KANK3,RAB11B	-48265,-1257
chr6:26087686-26087960	chr6	+	26087783	26087857	True	NM_139008,NM_139009,NM_005323,NM_000410,NM_139003,NM_139004,NM_139006,NM_139007,NM_139011,NM_139010	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	+,+,-,+,+,+,+,+,+,+	HFE,HFE,HIST1H1T,HFE,HFE,HFE,HFE,HFE,HFE,HFE	-327,-327,20557,-327,-327,-327,-327,-327,-327,-327
chr5:133508877-133510700	chr5	+	133509233	133510739	True	NM_006930,NR_037434,NM_170679	chr5,chr5,chr5	-,+,-	SKP1,MIR3661,SKP1	2047,50708,2047
chr10:75010026-75010899	chr10	+	75010228	75010894	True	NM_173348,NM_015190,NM_016065	chr10,chr10,chr10	+,-,-	FAM149B1,DNAJC9,MRPS16	-82402,-3203,1607
chr1:42380407-42380738	chr1	+	42380406	42380764	True	NM_024503,NM_007102,NM_001127714	chr1,chr1,chr1	-,+,-	HIVEP3,GUCA2B,HIVEP3	3782,238327,3782
chr4:54930120-54930337	chr4	+	54930177	54930385	True	NM_133267,NM_012110	chr4,chr4	+,-	GSX2,CHIC2	35862,453
chr19:12628498-12629071	chr19	+	12628516	12628855	True	NM_152601,NM_153358	chr19,chr19	-,+	ZNF709,ZNF791	-32884,92876
chr12:56752323-56753613	chr12	+	56752358	56753622	True	NM_198332,NM_005419,NM_016584,NM_001638	chr12,chr12,chr12,chr12	-,-,+,-	STAT2,STAT2,IL23A,APOF	465,465,-19747,3011
chr22:24891064-24891291	chr22	+	24891098	24891276	True	NR_028483,NR_028484,NM_016327	chr22,chr22,chr22	-,-,+	C22orf45,C22orf45,UPB1	-315,-315,0
chr11:61523374-61523649	chr11	+	61523429	61523669	True	NR_026882,NM_013279,NM_001127392	chr11,chr11,chr11	-,+,+	DKFZP434K028,C11orf9,C11orf9	1517,-619,-3359
chr11:2020102-2020389	chr11	+	2020216	2020422	True	NR_002196,NR_024471,NR_030533,NM_021134	chr11,chr11,chr11,chr11	-,-,-,+	H19,LOC100133545,MIR675,MRPL23	-1151,-9066,-2155,-51765
chr19:7292192-7292495	chr19	+	7292389	7292452	True	NM_000208,NM_001079817,NM_015318	chr19,chr19,chr19	-,-,+	INSR,INSR,ARHGEF18	1610,1610,167546
chr9:103234091-103235257	chr9	+	103234467	103235223	True	NM_003692,NM_017746	chr9,chr9	+,-	TMEFF1,TEX10	296,-119208
chr10:105238573-105238962	chr10	+	105238631	105239009	True	NM_001129742,NM_004210	chr10,chr10	-,+	CALHM3,NEURL	38,14725
chr6:13713411-13714253	chr6	+	13713677	13714294	True	NM_005493,NM_016167	chr6,chr6	-,+	RANBP9,NOL7	-1881,-98181
chr12:75724858-75725434	chr12	+	75724921	75725263	True	NM_032606,NM_152779	chr12,chr12	-,+	CAPS2,GLIPR1L1	-1085,3199
chr2:172952156-172952461	chr2	+	172952182	172952436	True	NM_178120,NM_001038493,NM_004405	chr2,chr2,chr2	+,+,-	DLX1,DLX1,DLX2	-2033,-2033,15092
chr21:30445387-30445650	chr21	+	30445438	30445604	True	NM_006585,NM_020152	chr21,chr21	-,+	CCT8,C21orf7	456,7268
chr10:120864386-120865276	chr10	+	120864431	120865119	True	NM_207009,NR_027141,NM_003750	chr10,chr10,chr10	+,+,-	FAM45A,FAM45B,EIF3A	-871,-853,-24097
chr1:247709956-247710979	chr1	+	247710043	247711008	True	NM_198074,NM_145278	chr1,chr1	-,+	OR2C3,C1orf150	-12902,1442
chr20:60982312-60982542	chr20	+	60982399	60982533	True	NM_001024,NM_031215	chr20,chr20	+,-	RPS21,CABLES2	-20329,-60
chr3:32022180-32022445	chr3	+	32022231	32022455	True	NM_017784,NM_001137674,NM_001174060	chr3,chr3,chr3	-,+,-	OSBPL10,ZNF860,OSBPL10	937,810,937
chr12:5490713-5491920	chr12	+	5491278	5491916	True	NM_020373,NM_001102654	chr12,chr12	-,+	ANO2,NTF3	563532,49363
chr22:35876167-35877010	chr22	+	35876203	35876985	True	NM_005368,NM_014310	chr22,chr22	-,+	MB,RASD2	136449,60366
chrX:50212495-50212882	chrX	+	50212577	50212869	True	NM_033670,NM_001013742	chrX,chrX	+,-	CCNB3,DGKK	-185088,902
chr15:93344218-93345657	chr15	+	93344279	93345325	True	NR_033769,NM_207446	chr15,chr15	+,-	ASB9P1,FAM174B	-5616,-145248
chrX:46938652-46938920	chrX	+	46938681	46938747	True	NM_004683,NM_152869,NM_001135998	chrX,chrX,chrX	+,+,-	RGN,RGN,NDUFB11	-960,-960,65398
chr17:1551229-1551622	chr17	+	1551344	1551604	True	NM_001163673,NR_028075,NM_031430,NR_028076,NM_145352,NM_145350,NM_003693	chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,-,-,-,-	WDR81,SCARF1,RILP,SCARF1,SCARF1,SCARF1,SCARF1	68212,-2303,1838,-2303,-2303,-2303,-2303
chr20:45604028-45604408	chr20	+	45604190	45604272	True	NM_172110,NM_033550	chr20,chr20	+,-	EYA2,TP53RK	-80978,-285914
chr1:67519556-67519865	chr1	+	67519647	67519707	True	NM_144701,NM_015139	chr1,chr1	+,-	IL23R,SLC35D1	112461,423
chr3:184041209-184042554	chr3	+	184041229	184042601	True	NM_004953,NM_198244,NM_198242,NM_198241,NM_001194946,NM_001194947,NM_001171087,NR_003055,NM_182917	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,+,+,-,+,+	EIF4G1,EIF4G1,EIF4G1,EIF4G1,EIF4G1,EIF4G1,CLCN2,SNORD66,EIF4G1	-3179,-8997,-8997,-8997,-8997,-8997,36840,882,-8328
chr10:103348808-103349356	chr10	+	103348846	103349228	True	NR_033406,NM_013274,NM_015448,NM_001174085,NM_001174084	chr10,chr10,chr10,chr10,chr10	-,-,+,-,-	POLL,POLL,DPCD,POLL,POLL	-819,-819,-808,-819,-819
chr4:22745129-22745931	chr4	+	22745128	22745844	True	NM_145290,NM_020973	chr4,chr4	-,+	GPR125,GBA3	-227456,-50632
chr16:84179674-84180245	chr16	+	84179780	84180044	True	NM_031463,NM_001146051,NM_178452	chr16,chr16,chr16	-,-,+	HSDL1,HSDL1,LRRC50	-980,-980,-966
chr18:61422431-61422914	chr18	+	61422434	61422877	True	NM_001040147,NM_006919	chr18,chr18	+,-	SERPINB7,SERPINB3	-2208,-93237
chr10:7662759-7663048	chr10	+	7662758	7663098	True	NM_002216,NM_032817	chr10,chr10	+,-	ITIH2,ITIH5	82137,-1122
chr13:41523280-41523977	chr13	+	41523878	41523996	True	NR_003365,NM_007187	chr13,chr13	-,+	SUGT1P3,WBP4	-27992,111700
chr12:57915100-57915611	chr12	+	57915343	57915639	True	NM_001195055,NM_052897,NM_001195053,NM_004083,NM_001195054,NM_001195057,NM_001195056	chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,+,-,-,-,-,-	DDIT3,MBD6,DDIT3,DDIT3,DDIT3,DDIT3,DDIT3	-1043,1019,-1043,-1043,-1043,-1043,-1043
chrX:70942840-70943861	chrX	+	70942889	70943893	True	NR_001568,NR_034005,NM_001145140,NM_001145139	chrX,chrX,chrX,chrX	-,+,-,-	BCYRN1,FLJ46446,CXorf49,CXorf49B	5119,-25894,-4754,-4754
chrX:70942840-70943861	chrX	-	70977333	70978337	False	NR_001568,NM_001145140,NM_001145139	chrX,chrX,chrX	-,+,+	BCYRN1,CXorf49,CXorf49B	-28371,4802,4802
chr20:10415509-10415727	chr20	+	10415531	10415761	True	NM_170784,NM_018848,NM_001009608	chr20,chr20,chr20	-,-,+	MKKS,MKKS,C20orf94	-665,-2961,189
chr3:112202872-112203544	chr3	+	112202885	112203524	True	NM_017945,NM_001085357	chr3,chr3	+,-	SLC35A5,BTLA	77370,14947
chr1:213032574-213032779	chr1	+	213032574	213032705	True	NM_014053,NR_027286,NR_027285	chr1,chr1,chr1	+,-,-	FLVCR1,NCRNA00292,NCRNA00292	-1028,-1094,-1094
chr17:78195519-78196097	chr17	+	78195615	78195763	True	NM_000199,NM_173626,NM_001166349,NM_001166348,NM_001166347	chr17,chr17,chr17,chr17,chr17	-,+,+,+,+	SGSH,SLC26A11,SLC26A11,SLC26A11,SLC26A11	-1416,-1466,-1466,-1466,-1466
chr5:156614694-156616016	chr5	+	156614694	156616020	True	NM_130899,NM_005546	chr5,chr5	-,+	FAM71B,ITK	-21415,-6838
chr17:8923280-8923537	chr17	+	8923283	8923533	True	NM_004822,NM_001142633	chr17,chr17	+,-	NTN1,PIK3R5	1325,-54259
chrX:47971396-47972163	chrX	+	47971532	47972201	True	NM_001205103,NR_028366,NR_033730	chrX,chrX,chrX	+,+,-	LOC100509575,SSX6,ZNF630	-4214,-4224,-40507
chr17:41476651-41477279	chr17	+	41476741	41477249	True	NM_001661,NR_027413	chr17,chr17	+,-	ARL4D,LOC100130581	-439,-10475
chrX:122869378-122871189	chrX	+	122869846	122871040	True	NM_001204401,NM_001081550	chrX,chrX	+,-	XIAP,THOC2	122621,-2942
chr12:132437339-132438512	chr12	+	132437557	132438228	True	NM_015409,NM_175066	chr12,chr12	+,-	EP400,DDX51	-3101,190705
chr14:105766705-105766967	chr14	+	105766717	105766969	True	NM_001519,NM_001100913	chr14,chr14	-,+	BRF1,PACS2	410,14111
chr14:53412753-53414002	chr14	+	53412891	53413929	True	NM_001134999,NM_006832,NM_001135000,NM_145251	chr14,chr14,chr14,chr14	-,-,-,+	FERMT2,FERMT2,FERMT2,STYX	3944,3944,3944,-216065
chr6:160152095-160153516	chr6	+	160152582	160153466	True	NM_004906,NM_152857,NM_152858,NR_037166	chr6,chr6,chr6,chr6	+,+,+,-	WTAP,WTAP,WTAP,LOC100129518	-4489,-4021,-4489,29948
chr9:15553162-15553516	chr9	+	15553167	15553523	True	NM_173550,NM_033222	chr9,chr9	+,-	C9orf93,PSIP1	-121,-42164
chr10:35380707-35381285	chr10	+	35381209	35381317	True	NM_001198777,NM_003591,NM_001881	chr10,chr10,chr10	-,-,+	CUL2,CUL2,CREM	-1639,-1898,34483
chr8:143753989-143755157	chr8	+	143754144	143755053	True	NR_033343,NM_003724,NM_001077527,NM_005672	chr8,chr8,chr8,chr8	+,-,-,+	PSCA,JRK,JRK,PSCA	-2469,-2743,-2743,6820
chr4:124752990-124753799	chr4	+	124753175	124753828	True	NM_020337,NR_027106	chr4,chr4	-,+	ANKRD50,LOC285419	880110,-57807
chr2:27715069-27715570	chr2	+	27715125	27715401	True	NM_022823,NM_015662,NM_001486	chr2,chr2,chr2	-,-,+	FNDC4,IFT172,GCKR	2775,-2554,4304
chr4:491916-492875	chr4	+	492099	492876	True	NM_133474,NM_001127178,NM_017733	chr4,chr4,chr4	-,+,+	ZNF721,PIGG,PIGG	616,112,112
chr14:58712030-58712555	chr14	+	58712036	58712591	True	NM_152132,NM_002788,NR_029434	chr14,chr14,chr14	+,+,-	PSMA3,PSMA3,FLJ31306	-494,-494,52321
chr16:57571168-57572304	chr16	+	57571341	57572167	True	NM_153837,NM_033212	chr16,chr16	+,-	GPR114,CCDC102A	4433,-864
chr11:289496-289826	chr11	+	289509	289571	True	NM_001025295,NM_025092	chr11,chr11	-,+	IFITM5,ATHL1	10005,-422
chr19:15164348-15164587	chr19	+	15164362	15164632	True	NM_006844,NM_012114	chr19,chr19	-,+	ILVBL,CASP14	71995,-4122
chr22:43117243-43117773	chr22	+	43117363	43117728	True	NR_029422,NM_017436	chr22,chr22	+,-	RNU12,A4GALT	-106177,-487
chr5:140537612-140537882	chr5	+	140537792	140537910	True	NM_018939,NM_031947,NR_001280	chr5,chr5,chr5	+,-,+	PCDHB6,SLC25A2,PCDHB17	-8004,145752,-2263
chr16:48641930-48642207	chr16	+	48642017	48642257	True	NM_153029,NM_031490	chr16,chr16	-,+	N4BP1,LONP2	1914,-363862
chr3:183599914-183601353	chr3	+	183600360	183600810	True	NM_182537,NM_018622,NM_001037639	chr3,chr3,chr3	+,-,-	HTR3D,PARL,PARL	148521,1942,1942
chr9:116613015-116613505	chr9	+	116613080	116613550	True	NM_133374,NM_001633	chr9,chr9	+,-	ZNF618,AMBP	25011,227252
chr2:131437496-131438209	chr2	+	131437544	131438190	True	NR_023391,NM_001079530	chr2,chr2	+,-	C2orf14,CFC1B	28,-80293
chr2:131437496-131438209	chr2	+	132044319	132044898	False	NR_030728,NM_001077637	chr2,chr2	+,-	LOC440910,LOC150786	-7507,76883
chr2:131437496-131438209	chr2	-	131198536	131199126	False	NM_032357,NM_001079530	chr2,chr2	-,+	CCDC115,CFC1B	-98614,79540
chr2:131437496-131438209	chr2	-	130807621	130808197	False	NR_026758,NM_032144	chr2,chr2	-,+	LOC440905,RAB6C	557,-70437
chr10:112665211-112665851	chr10	+	112665344	112665764	True	NM_007373,NM_001195306	chr10,chr10	+,-	SHOC2,BBIP1	13536,12984
chr3:133653361-133654685	chr3	+	133653466	133654646	True	NM_021203,NM_025041	chr3,chr3	+,-	SRPRB,C3orf36	-150642,-4810
chr4:48272112-48273936	chr4	+	48272206	48273531	True	NM_020846,NM_003215	chr4,chr4	+,-	SLAIN2,TEC	70081,-392
chr19:46997815-46998348	chr19	+	46997921	46998231	True	NM_005184,NM_020709	chr19,chr19	+,-	CALM3,PNMAL2	106280,988
chr10:182495-182788	chr10	+	182530	182810	True	NM_006624,NM_001164154,NM_001202465,NM_001202464,NM_001202466,NM_212479	chr10,chr10,chr10,chr10,chr10,chr10	+,-,+,+,+,+	ZMYND11,TUBB8,ZMYND11,ZMYND11,ZMYND11,ZMYND11	-2177,-87026,-2158,-1158,-2158,-2158
chr19:51608016-51609116	chr19	+	51608111	51609152	True	NM_145232,NM_014441	chr19,chr19	-,+	CTU1,SIGLEC9	2548,18984
chr1:167881988-167883296	chr1	+	167882017	167883084	True	NM_018417,NM_001017977,NM_001167749	chr1,chr1,chr1	-,+,-	ADCY10,DCAF6,ADCY10	420,22712,420
chr18:66380611-66381341	chr18	+	66380651	66381389	True	NM_019022,NM_001093729	chr18,chr18	-,+	TMX3,CCDC102B	1020,1101
chr9:130158288-130158977	chr9	+	130158290	130158658	True	NM_014580,NR_002449	chr9,chr9	+,-	SLC2A8,SNORA65	806,52308
chr11:124253750-124255150	chr11	+	124253750	124255193	True	NM_001005468,NM_001005198	chr11,chr11	-,+	OR8B2,OR8G5	-511,-119078
chr19:42568948-42569474	chr19	+	42568951	42569489	True	NM_022752,NM_002088	chr19,chr19	+,-	ZNF574,GRIK5	10800,518
chr10:13341192-13341520	chr10	+	13341192	13341484	True	NM_006214,NM_001037537,NM_182751	chr10,chr10,chr10	-,-,+	PHYH,PHYH,MCM10	696,312,-137697
chr7:45066736-45067976	chr7	+	45066822	45067760	True	NR_003697,NM_001029835	chr7,chr7	-,+	C7orf40,CCM2	-40563,82
chr7:57203897-57204421	chr7	+	57204143	57204387	True	NM_033273,NR_036102	chr7,chr7	-,+	ZNF479,MIR3147	3234,268343
chr22:29840110-29841496	chr22	+	29840306	29841152	True	NR_002727,NM_021026	chr22,chr22	-,+	RFPL1S,RFPL1	-2188,-5785
chrX:49129680-49131653	chrX	+	49129685	49131106	True	NM_001114377,NM_033215,NM_001184745,NM_014009	chrX,chrX,chrX,chrX	-,+,+,-	FOXP3,PPP1R3F,PPP1R3F,FOXP3	-8397,-3430,-3430,-8397
chr7:99161535-99162882	chr7	+	99161620	99162702	True	NM_001009958,NM_145111,NM_001009960,NM_138494,NM_001085368,NM_001083956,NM_024061,NM_001085367,NM_001085366	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,-,+,+,+,+,+,+,+	ZNF655,FAM200A,ZNF655,ZNF655,ZNF655,ZNF655,ZNF655,ZNF655,ZNF655	-5223,-11863,-5223,-5626,-5223,-5626,-5626,-5223,-5626
chr3:156272706-156272912	chr3	+	156272751	156272911	True	NM_015508,NM_007107	chr3,chr3	+,-	TIPARP,SSR3	119293,112
chr7:74266900-74267148	chr7	+	74266929	74267170	True	NM_173537,NR_027775	chr7,chr7	-,+	GTF2IRD2,PMS2P5	721,39723
chr7:74266900-74267148	chr7	-	74509081	74509322	False	NM_030798,NM_001003795	chr7,chr7	-,+	WBSCR16,GTF2IRD2B	-19382,-785
chr1:41711764-41713656	chr1	+	41711790	41713623	True	NM_012236,NM_001172218,NM_001172219,NR_037868,NM_001172220	chr1,chr1,chr1,chr1,chr1	-,-,-,+,-	SCMH1,SCMH1,SCMH1,LOC100507178,SCMH1	-3975,-3975,-3975,-231593,-3975
chr19:48218012-48220010	chr19	+	48218374	48219705	True	NM_014601,NM_198479	chr19,chr19	+,-	EHD2,TPRX1	-1831,87206
chr8:10693129-10694273	chr8	+	10693524	10694313	True	NM_001040032,NM_017884	chr8,chr8	+,-	C8orf74,PINX1	-163441,3038
chr1:89154061-89155585	chr1	+	89154166	89155631	True	NM_001514,NM_006256	chr1,chr1	-,+	GTF2B,PKN2	201727,-4298
chr13:96328443-96328867	chr13	+	96328449	96328909	True	NM_006260,NM_198968	chr13,chr13	+,-	DNAJC3,DZIP1	483,-31492
chr20:61586032-61586791	chr20	+	61586112	61586278	True	NM_022105,NM_022082	chr20,chr20	-,+	DIDO1,SLC17A9	-16808,-2164
chr17:31617656-31618376	chr17	+	31617737	31618329	True	NM_183377,NM_173847	chr17,chr17	-,+	ACCN1,SPACA3	1727,-298906
chr16:2284820-2285268	chr16	+	2284948	2285314	True	NM_001374,NM_001178029	chr16,chr16	+,-	DNASE1L2,ECI1	1153,16338
chr17:39620975-39621624	chr17	+	39621103	39621623	True	NM_030975,NM_002278	chr17,chr17	+,-	KRTAP9-9,KRT32	-209518,2065
chr4:75029751-75031366	chr4	+	75029924	75031019	True	NM_002089,NM_001144978	chr4,chr4	-,+	CXCL2,MTHFD2L	-64927,-6161
chr1:177150653-177150855	chr1	+	177150689	177150835	True	NM_207108,NM_021165	chr1,chr1	-,+	ASTN1,FAM5B	-16665,-10107
chr12:49761328-49761603	chr12	+	49761406	49761607	True	NM_001008223,NM_023071	chr12,chr12	-,+	C1QL4,SPATS2	-30435,-769
chr19:35607229-35607944	chr19	+	35607361	35607863	True	NM_001136012,NM_001136010,NM_001136011,NM_021910,NR_024562,NM_001136009,NM_001136008,NM_001136007,NM_005971	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,-,+,+,+,+	FXYD3,FXYD3,FXYD3,FXYD3,LOC100128675,FXYD3,FXYD3,FXYD3,FXYD3	-687,-687,-687,-687,-10153,-687,-687,-687,-687
chr9:115517725-115519540	chr9	+	115517956	115519422	True	NM_001012994,NM_021218	chr9,chr9	+,-	SNX30,C9orf80	-4874,-37569
chr13:32327107-32328522	chr13	+	32327165	32328338	True	NM_130806,NM_001136571	chr13,chr13	+,-	RXFP2,ZAR1L	-13537,557803
chr9:100153478-100154268	chr9	+	100153534	100154152	True	NR_026847,NM_014290	chr9,chr9	-,+	LOC286359,TDRD7	4871,20149
chr1:151149715-151150557	chr1	+	151149945	151150504	True	NM_013353,NR_037937	chr1,chr1	-,+	TMOD4,SCNM1	-1398,-11504
chr9:125133718-125134051	chr9	+	125133896	125134070	True	NM_080591,NM_001004451,NM_000962	chr9,chr9,chr9	+,-,+	PTGS1,OR1J1,PTGS1	-718,106185,-718
chr4:102769543-102770945	chr4	+	102769648	102770962	True	NM_001083907,NM_001135148	chr4,chr4	+,-	BANK1,SLC39A8	-34719,474560
chr20:56099191-56099619	chr20	+	56099190	56099658	True	NM_002591,NM_080618	chr20,chr20	+,-	PCK1,CTCFL	36478,546
chr14:102605379-102605824	chr14	+	102605441	102605603	True	NM_144574,NM_181308,NM_181302,NM_001017963,NM_181291	chr14,chr14,chr14,chr14,chr14	+,+,+,-,+	WDR20,WDR20,WDR20,HSP90AA1,WDR20	608,608,608,533,608
chr19:58566772-58567840	chr19	+	58566984	58567818	True	NM_001164530,NM_001145543,NM_007134,NM_003436,NM_001164529,NM_001164527	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+	ZNF135,ZSCAN18,ZNF135,ZNF135,ZNF135,ZNF135	2788,41962,2788,2788,2788,2788
chr5:137612984-137614117	chr5	+	137613178	137613990	True	NM_001496,NM_001135647	chr5,chr5	-,+	GFRA3,FAM53C	-2925,59233
chr5:175392253-175392721	chr5	+	175392255	175392493	True	NM_032361,NM_001008220	chr5,chr5	-,+	THOC3,CPLX2	3102,-93807
chr1:32863534-32864236	chr1	+	32863939	32864255	True	NM_052841,NM_001143890,NM_018045,NM_001143889,NM_001143888	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	TSSK3,BSDC1,BSDC1,BSDC1,BSDC1	-36128,-3877,-3877,-3877,-3877
chr5:115420894-115421100	chr5	+	115421003	115421137	True	NM_016144,NR_033363	chr5,chr5	+,-	COMMD10,ATG12	-327,-243455
chr11:65432011-65433030	chr11	+	65432340	65432813	True	NM_021975,NM_153253,NM_001145138	chr11,chr11,chr11	-,+,-	RELA,SIPA1,RELA	-1897,-24805,-1897
chr1:113499016-113499301	chr1	+	113499076	113499156	True	NM_003051,NR_002796,NM_001166496	chr1,chr1,chr1	-,+,-	SLC16A1,AKR7A2P1,SLC16A1	-101,-33155,-391
chr4:120987868-120988097	chr4	+	120987902	120988124	True	NM_002358,NR_037630	chr4,chr4	-,+	MAD2L1,LOC645513	31,-612015
chr6:85473212-85473570	chr6	+	85473420	85473594	True	NM_001204813,NM_001080508	chr6,chr6	+,-	NT5E,TBX18	685707,355
chrX:100878207-100878494	chrX	+	100878240	100878426	True	NM_019007,NM_001009584,NM_001184768,NR_033670,NM_016607,NM_177948,NM_177947,NR_033669	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,+,+,+,-	ARMCX6,ARMCX6,ARMCX6,ARMCX6,ARMCX3,ARMCX3,ARMCX3,ARMCX6	-5249,-5249,-5249,-5249,-171,2,-171,-5249
chr2:241760392-241760592	chr2	+	241760449	241760547	True	NM_000030,NM_004321	chr2,chr2	+,-	AGXT,KIF1A	47614,-825
chr4:140372659-140373892	chr4	+	140372984	140373925	True	NM_031296,NM_030648	chr4,chr4	+,-	RAB33B,SETD7	1035,103702
chr11:6677263-6678000	chr11	+	6677290	6678015	True	NM_001014795,NM_003737	chr11,chr11	+,-	ILK,DCHS1	-52134,-216
chr1:85723658-85724851	chr1	+	85723978	85724659	True	NR_024113,NM_145172,NM_198077	chr1,chr1,chr1	-,+,-	C1orf52,WDR63,C1orf52	747,-196051,747
chr3:171528571-171529888	chr3	+	171528587	171529629	True	NM_001130081,NM_002662,NM_001164436	chr3,chr3,chr3	-,-,+	PLD1,PLD1,TMEM212	-314,-314,31509
chr5:6582399-6583089	chr5	+	6582519	6583021	True	NR_024424,NR_024423,NM_001193455	chr5,chr5,chr5	+,+,-	LOC255167,LOC255167,NSUN2	388,-283,50502
chr3:121742494-121742785	chr3	+	121742588	121742835	True	NM_175924,NM_175862,NM_001199800,NM_001199799	chr3,chr3,chr3,chr3	-,+,-,-	ILDR1,CD86,ILDR1,ILDR1	-1461,31385,-1461,-1461
chr11:45940353-45941833	chr11	+	45940460	45941861	True	NM_152312,NM_004813,NM_057174	chr11,chr11,chr11	+,-,-	GYLTL1B,PEX16,PEX16	1334,-786,-786
chr22:18921703-18922302	chr22	+	18921779	18922211	True	NM_001195226,NM_005675,NM_016335	chr22,chr22,chr22	-,+,-	PRODH,DGCR6,PRODH	1803,-28094,1905
chr11:57528182-57529595	chr11	+	57528307	57529609	True	NM_001085468,NM_001085469,NM_001085459,NM_001085458,NM_001085462,NM_001085463,NM_001085460,NM_001085461,NM_001085466,NM_001085467,NM_001085464,NM_001085465,NM_001331,NM_001145101	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,+,+,+,+,+,+,+,+,-	CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,BTBD18	9,9,9,9,9,9,9,9,9,9,9,9,9,-9054
chr22:50174295-50174548	chr22	+	50174311	50174573	True	NM_014838,NR_026993	chr22,chr22	+,-	ZBED4,LOC90834	72923,-353
chr17:7609638-7610818	chr17	+	7609805	7610767	True	NM_001126114,NM_001406	chr17,chr17	-,+	TP53,EFNB3	-18942,-1336
chr2:204825202-204827003	chr2	+	204825378	204826641	True	NM_203365,NM_012092	chr2,chr2	-,+	RAPH1,ICOS	-425320,-23958
chrX:119601911-119602741	chrX	+	119601927	119602630	True	NM_013995,NM_002294,NM_001122606,NM_012069	chrX,chrX,chrX,chrX	-,-,-,+	LAMP2,LAMP2,LAMP2,ATP1B4	624,624,624,-106038
chr7:43153972-43154416	chr7	+	43154030	43154448	True	NM_015052,NM_002787	chr7,chr7	+,-	HECW1,PSMA2	-1883,-182225
chr19:9787588-9789202	chr19	+	9787911	9789072	True	NM_001048241,NM_017656,NM_001130032,NM_001130031	chr19,chr19,chr19,chr19	+,-,-,-	UBL5,ZNF562,ZNF562,ZNF562	149495,-2135,-2135,-2135
chr9:77701980-77702720	chr9	+	77702226	77702717	True	NM_012383,NM_017881,NR_023352,NM_001127603	chr9,chr9,chr9,chr9	+,-,-,-	OSTF1,C9orf95,C9orf95,C9orf95	680,466,466,466
chr20:1968947-1969308	chr20	+	1968962	1969336	True	NM_001190900,NM_001190892,NM_001040023,NM_024411,NM_001190898,NM_001190899	chr20,chr20,chr20,chr20,chr20,chr20	-,-,+,-,-,-	PDYN,PDYN,SIRPA,PDYN,PDYN,PDYN	5108,4166,-93188,5645,5645,5645
chr1:11027128-11029098	chr1	+	11027541	11029051	True	NM_007375,NM_001170754	chr1,chr1	+,-	TARDBP,C1orf127	43627,13093
chr11:75239816-75241073	chr11	+	75239854	75241051	True	NM_030792,NM_001235	chr11,chr11	-,+	GDPD5,SERPINH1	-3255,32118
chr4:21535091-21537034	chr4	+	21535590	21537066	True	NM_001035004,NM_145048	chr4,chr4	-,+	KCNIP4,PACRGL	9263,-833611
chr21:40140547-40141490	chr21	+	40140565	40141503	True	NM_005239,NR_027066,NR_027065	chr21,chr21,chr21	+,-,-	ETS2,NCRNA00114,NCRNA00114	36345,59,3948
chr16:53079043-53079605	chr16	+	53079207	53079589	True	NR_033920,NM_025134	chr16,chr16	-,+	LOC643714,CHD9	-438320,9355
chr1:67270041-67271578	chr1	+	67270402	67271098	True	NM_005478,NM_152665	chr1,chr1	-,+	INSL5,TCTEX1D1	-3460,-52323
chr1:26327220-26327832	chr1	+	26327396	26327818	True	NM_000437,NM_004455	chr1,chr1	-,+	PAFAH2,EXTL1	-2748,20452
chr17:7555296-7555688	chr17	+	7555400	7555610	True	NM_001678,NM_001126115	chr17,chr17	+,-	ATP1B2,TP53	-1197,23251
chr7:99275796-99276102	chr7	+	99275963	99276155	True	NR_033810,NR_033808,NR_033809,NR_033812,NR_033811,NR_033807,NM_145115,NM_000777,NM_001190484	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,-,+,-,-	CYP3A5,CYP3A5,CYP3A5,CYP3A5,CYP3A5,CYP3A5,ZNF498,CYP3A5,CYP3A5	1520,1520,1520,1520,1520,1520,-61443,1520,1520
chr4:146648956-146650593	chr4	+	146649300	146650397	True	NM_001080531,NM_178835	chr4,chr4	+,-	C4orf51,ZNF827	-48003,209266
chr22:38508146-38508551	chr22	+	38508180	38508597	True	NM_012407,NM_025045	chr22,chr22	+,-	PICK1,BAIAP2L2	-54969,-1504
chr18:21720184-21722138	chr18	+	21720190	21721881	True	NM_012189,NM_138643,NM_018030,NM_138644,NM_153770,NM_153769,NM_153768	chr18,chr18,chr18,chr18,chr18,chr18,chr18	+,+,-,+,+,+,+	CABYR,CABYR,OSBPL1A,CABYR,CABYR,CABYR,CABYR	-1290,-1290,130371,-797,-1290,-1290,-1290
chr10:102791169-102791417	chr10	+	102791256	102791466	True	NM_001195263,NM_024895,NM_030971	chr10,chr10,chr10	-,-,+	PDZD7,PDZD7,SFXN3	-342,-342,-311
chr16:85215168-85215636	chr16	+	85215210	85215634	True	NR_033984,NM_198491	chr16,chr16	+,-	LOC400548,FAM92B	-44505,-69096
chr19:9433510-9434268	chr19	+	9433793	9434286	True	NM_001172650,NM_001202425,NM_032497,NM_198535,NM_001202409,NM_001202408,NM_001202407,NM_001202406,NM_001202410,NM_001202411,NM_001202412	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,-,+,+,+,+,+,+,+	ZNF559-ZNF177,ZNF559-ZNF177,ZNF559,ZNF699,ZNF559,ZNF559,ZNF559,ZNF559,ZNF559,ZNF559,ZNF559	615,1084,161,-17998,161,161,161,161,161,161,615
chr10:42971925-42972837	chr10	+	42971939	42972821	True	NR_026777,NR_026827	chr10,chr10	-,+	ZNF37BP,LOC84856	75509,-1059
chr9:114394089-114396054	chr9	+	114394366	114396101	True	NM_004125,NM_001015882,NR_037148,NR_034087	chr9,chr9,chr9,chr9	+,+,+,-	DNAJC25-GNG10,DNAJC25,DNAJC25,C9orf29	-792,-792,-792,-18533
chr20:54986525-54988147	chr20	+	54986631	54988067	True	NM_020356,NM_001164114,NM_001164115,NM_001164116,NM_198437	chr20,chr20,chr20,chr20,chr20	+,+,+,+,-	CASS4,CASS4,CASS4,CASS4,AURKA	26,26,26,0,-19280
chr9:79375122-79375727	chr9	+	79375202	79375682	True	NR_015342,NM_015225	chr9,chr9	+,-	PCA3,PRUNE2	3671,145373
chr8:22410733-22411319	chr8	+	22410745	22411363	True	NR_027715,NM_005775	chr8,chr8	-,+	FLJ14107,SORBS3	88409,-1545
chr1:64937816-64938079	chr1	+	64937817	64938070	True	NM_002227,NM_020925	chr1,chr1	-,+	JAK1,CACHD1	494168,-1392
chr16:3166465-3166886	chr16	+	3166478	3166746	True	NM_001042428,NR_024167,NR_024166,NM_003456	chr16,chr16,chr16,chr16	+,-,-,+	ZNF205,MGC3771,MGC3771,ZNF205	-3966,-879,-879,-3966
chr19:12168168-12169600	chr19	+	12168514	12169317	True	NM_001136501,NM_001080404	chr19,chr19	+,-	ZNF844,ZNF878	6228,-1387
chr2:97428077-97428601	chr2	+	97428247	97428575	True	NR_024521,NM_020184	chr2,chr2	-,+	LMAN2L,CNNM4	-22434,-1659
chrX:152801153-152801391	chrX	+	152801186	152801336	True	NM_001130997,NM_001001344,NM_021949	chrX,chrX,chrX	-,+,+	FAM58A,ATP2B3,ATP2B3	63346,243,243
chr1:21616521-21616753	chr1	+	21616605	21616709	True	NM_032264,NM_001113349,NM_001397	chr1,chr1,chr1	+,-,-	NBPF3,ECE1,ECE1	149921,107,323
chr8:69413606-69414459	chr8	+	69413652	69414260	True	NM_052958,NM_020361	chr8,chr8	+,-	C8orf34,CPA6	-170746,-755032
chr19:58282591-58282831	chr19	+	58282777	58282847	True	NM_017652,NM_001077426,NM_024762,NM_001204814	chr19,chr19,chr19,chr19	+,+,-,+	ZNF586,ZNF586,ZNF552,ZNF586	-1808,-1808,43484,-1808
chr14:78224921-78226180	chr14	+	78224999	78226040	True	NM_174943,NM_001173978,NM_012245	chr14,chr14,chr14	+,+,-	C14orf178,C14orf178,SNW1	1132,1132,1510
chr3:48593523-48593728	chr3	+	48593543	48593727	True	NM_033629,NM_004567,NM_033199	chr3,chr3,chr3	+,-,-	TREX1,PFKFB4,UCN2	-86365,550,7524
chr1:51435715-51436221	chr1	+	51435880	51436245	True	NM_001262,NM_007051,NM_078626	chr1,chr1,chr1	+,-,+	CDKN2C,FAF1,CDKN2C	-1571,-9944,-296
chr3:135982266-135983639	chr3	+	135982469	135983359	True	NM_001178014,NM_018133	chr3,chr3	+,-	PCCB,MSL2	-13366,-67781
chr9:37544120-37544711	chr9	+	37544439	37544717	True	NM_022490,NM_012166	chr9,chr9	+,-	POLR1E,FBXO10	-58552,31583
chr9:116102699-116103357	chr9	+	116102768	116103132	True	NM_001012361,NM_145241,NM_017688	chr9,chr9,chr9	-,-,+	WDR31,WDR31,BSPRY	-148,-148,8679
chr1:151009289-151010570	chr1	+	151009317	151009972	True	NM_138278,NM_001038707,NM_001159642	chr1,chr1,chr1	+,-,+	BNIPL,CDC42SE1,BNIPL	-339,22204,-339
chr7:99681247-99681748	chr7	+	99681403	99681734	True	NR_029498,NM_032924,NM_006833,NR_029510,NM_017715	chr7,chr7,chr7,chr7,chr7	-,-,+,-,-	MIR25,ZNF3,COPS6,MIR93,ZNF3	9591,-2032,4848,9795,-2032
chr14:32798760-32800638	chr14	+	32799199	32800662	True	NR_027263,NM_004274	chr14,chr14	-,+	C14orf128,AKAP6	-253294,-783
chr20:38730979-38731454	chr20	+	38730994	38731452	True	NM_003286,NM_005461	chr20,chr20	+,-	TOP1,MAFB	926009,586474
chr9:2013466-2014149	chr9	+	2013528	2014169	True	NM_139045,NR_015375,NM_003070	chr9,chr9,chr9	+,-,+	SMARCA2,FLJ35024,SMARCA2	1172,608255,1172
chr7:25728468-25730420	chr7	+	25728625	25730451	True	NR_029597,NM_004289	chr7,chr7	-,+	MIR148A,NFE2L3	259207,461395
chr4:171010781-171010995	chr4	+	171010795	171010939	True	NM_182662,NM_016228,NM_173872	chr4,chr4,chr4	-,-,+	AADAT,AADAT,CLCN3	483,294,-469124
chr19:40814831-40815339	chr19	+	40815022	40815095	True	NM_001031696,NM_001626	chr19,chr19	+,-	PLD3,AKT2	39236,-23757
chr1:150578726-150579418	chr1	+	150578855	150579338	True	NM_207045,NR_036211	chr1,chr1	-,+	ENSA,MIR4257	22328,-54501
chr11:116667153-116668295	chr11	+	116667263	116668155	True	NM_003904,NM_000040,NM_001166598,NM_052968	chr11,chr11,chr11,chr11	-,+,-,-	ZNF259,APOC3,APOA5,APOA5	-8524,32468,-4127,-4127
chr6:143415645-143417202	chr6	+	143415659	143417018	True	NM_016108,NM_006734	chr6,chr6	+,-	AIG1,HIVEP2	-33695,-149321
chr16:2793206-2793532	chr16	+	2793359	2793465	True	NM_016333,NR_027274,NR_027275	chr16,chr16,chr16	+,-,-	SRRM2,LOC100128788,LOC100128788	8864,1383,9186
chr8:27470825-27471028	chr8	+	27470968	27471028	True	NM_001171138,NM_016240,NM_203339,NM_001831	chr8,chr8,chr8,chr8	-,+,-,-	CLU,SCARA3,CLU,CLU	-1700,20548,-2030,1349
chr14:102096953-102098042	chr14	+	102096974	102097834	True	NR_031649,NM_001362	chr14,chr14	-,+	MIR1247,DIO3	-70215,-69340
chr7:1022641-1022933	chr7	+	1022819	1022883	True	NM_017781,NM_001031617	chr7,chr7	+,-	CYP2W1,COX19	-35,-7584
chr2:71352496-71353448	chr2	+	71352788	71353356	True	NM_005791,NM_032601	chr2,chr2	+,-	MPHOSPH10,MCEE	4087,4096
chr1:174129562-174130471	chr1	+	174129597	174130266	True	NM_172071,NM_014857	chr1,chr1	-,+	RC3H1,RABGAP1L	-167387,-1014
chr4:169432792-169433056	chr4	+	169432795	169433097	True	NM_001012967,NM_016081	chr4,chr4	-,+	DDX60L,PALLD	-31157,-14629
chr3:48646731-48647015	chr3	+	48646898	48647064	True	NM_033629,NM_003365	chr3,chr3	+,-	TREX1,UQCRC1	-139720,84
chr3:52259281-52260162	chr3	+	52259376	52260188	True	NM_017442,NM_144641	chr3,chr3	-,+	TLR9,PPM1M	41,19620
chr16:3186438-3186959	chr16	+	3186735	3186978	True	NM_004220,NR_024167,NM_001134655	chr16,chr16,chr16	+,-,+	ZNF213,MGC3771,ZNF213	-1742,-21136,-1665
chr2:97200902-97202053	chr2	+	97200968	97201876	True	NM_212481,NR_026875	chr2,chr2	+,-	ARID5A,NEURL3	587,-27122
chr16:58003808-58004357	chr16	+	58004124	58004400	True	NM_001297,NM_199456,NM_199046,NM_001135639	chr16,chr16,chr16,chr16	-,+,+,-	CNGB1,TEPP,TEPP,CNGB1	670,5938,5938,670
chr6:76468898-76469249	chr6	+	76468941	76469277	True	NM_015687,NM_004999	chr6,chr6	-,+	FILIP1,MYO6	-265445,-10097
chr6:138732814-138733310	chr6	+	138733097	138733343	True	NR_036099,NM_014320	chr6,chr6	-,+	MIR3145,HEBP2	23138,-7813
chrX:85403055-85403301	chrX	+	85403140	85403294	True	NM_053281,NM_001145414,NM_001139514	chrX,chrX,chrX	+,-,+	DACH2,CHM,DACH2	160,-100574,160
chr2:74872414-74874388	chr2	+	74872499	74874344	True	NM_138804,NM_004263	chr2,chr2	-,+	C2orf65,SEMA4F	871,7048
chr19:1271687-1271950	chr19	+	1271917	1271995	True	NR_027271,NM_017914,NR_023313,NM_001280,NR_023312	chr19,chr19,chr19,chr19,chr19	-,+,+,+,+	C19orf23,C19orf24,CIRBP,CIRBP,CIRBP	-1658,3524,-2701,-2701,-2701
chr19:52590959-52592754	chr19	+	52591130	52592317	True	NM_014225,NM_001136499	chr19,chr19	+,-	PPP2R1A,ZNF841	100737,6751
chr6:135825915-135827807	chr6	+	135825949	135827841	True	NM_001134832,NM_001134830,NM_001134831,NM_017651,NR_026805	chr6,chr6,chr6,chr6,chr6	-,-,-,-,+	AHI1,AHI1,AHI1,AHI1,NCRNA00271	-7046,-7046,-7046,-7046,-7061
chr17:34960035-34961157	chr17	+	34960173	34960928	True	NM_024864,NM_001033580	chr17,chr17	+,-	MRM1,MYO19	-2207,-68868
chr6:122734543-122735862	chr6	+	122734562	122735691	True	NM_020755,NM_004506	chr6,chr6	-,+	SERINC1,HSF2	57311,-13924
chr13:52025895-52026179	chr13	+	52026095	52026161	True	NM_001039937,NM_012141,NM_001101320,NM_001039938	chr13,chr13,chr13,chr13	-,-,+,-	INTS6,INTS6,SERPINE3,INTS6	1164,1164,-110978,1164
chr8:61593136-61594603	chr8	+	61593209	61594619	True	NR_034003,NM_017780	chr8,chr8	-,+	LOC100130298,CHD7	285744,-1924
chr16:4423035-4423338	chr16	+	4423081	4423253	True	NM_016069,NM_138440	chr16,chr16	-,+	PAM16,VASN	-21708,-1283
chr12:56108224-56108936	chr12	+	56108584	56108991	True	NM_002905,NM_002206,NM_001144996,NM_001144997,NM_001487,NR_037655,NR_037657,NR_037656,NR_037658,NM_001199771	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,-,-,-,+,+,+,+,+,+	RDH5,ITGA7,ITGA7,ITGA7,BLOC1S1,BLOC1S1,BLOC1S1,BLOC1S1,BLOC1S1-RDH5,RDH5	5159,-6898,-6898,-2495,826,826,1084,1084,826,5159
chr5:63256259-63256836	chr5	+	63256263	63256877	True	NM_000524,NM_178532	chr5,chr5	-,+	HTR1A,RNF180	719,204793
chr10:735033-735286	chr10	+	735034	735280	True	NR_027152,NM_014974	chr10,chr10	+,-	C10orf108,DIP2C	-39068,378
chr22:24195883-24196211	chr22	+	24195884	24195962	True	NM_198440,NM_001024939,NM_001024938,NM_030807	chr22,chr22,chr22,chr22	-,+,+,+	DERL3,SLC2A11,SLC2A11,SLC2A11	-14685,4078,3096,3096
chr9:67682762-67683180	chr9	+	67683119	67683229	True	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	111010,243531
chr9:67682762-67683180	chr9	-	45109019	45109073	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-118834,-1478289
chr9:67682762-67683180	chr9	-	47166229	47166279	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-3535499,-478714
chr9:67682762-67683180	chr9	+	46274246	46274300	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2643516,413265
chr12:64846497-64848320	chr12	+	64846522	64847614	True	NM_001170633,NM_013254	chr12,chr12	-,+	C12orf56,TBK1	-62177,-741
chrX:33289738-33291641	chrX	+	33290414	33291516	True	NM_004006,NM_152631	chrX,chrX	-,+	DMD,FAM47B	-60741,1669396
chr11:62521435-62521889	chr11	+	62521439	62521801	True	NM_002696,NM_024784	chr11,chr11	+,-	POLR2G,ZBTB3	7209,-31
chr2:207023049-207023287	chr2	+	207023109	207023335	True	NM_001959,NM_005006,NM_001037663,NM_021121,NR_002589,NR_002590,NM_001199984,NM_001199983,NM_001199982,NM_001199981	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,-,+,+,+,+,-,-,-,-	EEF1B2,NDUFS1,EEF1B2,EEF1B2,SNORD51,SNORA41,NDUFS1,NDUFS1,NDUFS1,NDUFS1	982,958,982,982,3269,3616,633,958,958,958
chr10:17171174-17173044	chr10	+	17171225	17172954	True	NM_001081,NM_003380	chr10,chr10	-,+	CUBN,VIM	-11,97303
chr19:18060003-18060595	chr19	+	18060250	18060607	True	NM_002248,NM_000215	chr19,chr19	+,-	KCNN1,JAK3	1503,-101409
chr14:21977789-21978754	chr14	+	21978038	21978762	True	NM_014828,NM_019852	chr14,chr14	+,-	TOX4,METTL3	-32755,745
chr5:140019489-140020081	chr5	+	140019512	140019959	True	NM_000591,NM_001185012,NR_037428,NM_006083,NM_001174104,NM_001174105,NM_018502,NM_002488,NM_001040021,NR_033697	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,-,+,+,-,-,+,-,-,-	CD14,NDUFA2,MIR3655,IK,CD14,CD14,TMCO6,NDUFA2,CD14,NDUFA2	-6477,7462,7469,7424,-6226,-6226,-551,7462,-6226,7462
chr19:29381504-29382086	chr19	+	29381505	29382103	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	73934,322083
chr5:140516136-140516627	chr5	+	140516205	140516291	True	NM_015669,NM_031947	chr5,chr5	+,-	PCDHB5,SLC25A2	-1456,167371
chr2:73524935-73525755	chr2	+	73525026	73525785	True	NM_001965,NR_029403	chr2,chr2	-,+	EGR4,CCT7	-4197,-63720
chr4:188917138-188917555	chr4	+	188917183	188917380	True	NM_173553,NM_174900	chr4,chr4	-,+	TRIML2,ZFP42	109089,-309
chr17:38029310-38030403	chr17	+	38029315	38030163	True	NM_183229,NM_183228,NM_198844,NM_183232,NM_199321,NM_183231,NM_012481,NM_183230	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,-,+,-,-,-	IKZF3,IKZF3,ZPBP2,IKZF3,ZPBP2,IKZF3,IKZF3,IKZF3	-8874,-8874,-4919,-8874,-4919,-8874,-8874,-8874
chr1:249149021-249149590	chr1	+	249149031	249149623	True	NM_001193328,NM_001136036,NM_024836	chr1,chr1,chr1	-,-,+	ZNF692,ZNF692,ZNF672	3742,3552,-16552
chr14:54976902-54977126	chr14	+	54976907	54977169	True	NM_004124,NM_006568	chr14,chr14	-,+	GMFB,CGRRF1	-21163,-371
chr9:112972912-112974402	chr9	+	112972998	112974390	True	NM_001136562,NM_001012993	chr9,chr9	+,-	AKAP2,C9orf152	-85268,-2585
chr15:34267077-34267985	chr15	+	34267273	34267650	True	NM_012125,NM_020371	chr15,chr15	+,-	CHRM5,AVEN	-6236,63716
chr18:39062182-39062956	chr18	+	39062192	39062900	True	NM_002647,NR_002838	chr18,chr18	+,-	PIK3C3,KC6	472298,37711
chr6:38669797-38670645	chr6	+	38670011	38670545	True	NM_006708,NM_001371	chr6,chr6	-,+	GLO1,DNAH8	457,20006
chr6:108144984-108145599	chr6	+	108145159	108145611	True	NM_018013,NM_198081	chr6,chr6	+,-	SOBP,SCML4	-333893,-4
chr7:99007013-99008735	chr7	+	99007018	99008627	True	NM_003910,NM_014891	chr7,chr7	+,-	BUD31,PDAP1	-468,-713
chr9:132083642-132084615	chr9	+	132083660	132084469	True	NM_001012715,NM_203434	chr9,chr9	+,-	C9orf106,IER5L	-416,-143120
chr20:305276-305535	chr20	+	305307	305574	True	NM_153269,NM_006943	chr20,chr20	-,+	C20orf96,SOX12	-33917,664
chr3:9852050-9852309	chr3	+	9852088	9852356	True	NR_037162,NM_133480,NM_001025930	chr3,chr3,chr3	+,-,+	TTLL3,TADA3,TTLL3	-495,-17668,-495
chr17:72525650-72527501	chr17	+	72526039	72527388	True	NM_152460,NM_174892	chr17,chr17	+,-	C17orf77,CD300LB	53668,275
chr10:5453876-5454128	chr10	+	5454004	5454170	True	NM_001047160,NM_001171864,NM_024803	chr10,chr10,chr10	+,-,-	NET1,TUBAL3,TUBAL3	347,-7211,-7211
chr2:18765778-18765998	chr2	+	18765789	18766025	True	NM_033253,NM_002252,NM_001199088,NM_001002006,NM_001199086,NM_001199087,NM_001199104,NM_001199103	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	-,+,-,-,-,-,-,-	NT5C1B,KCNS3,NT5C1B,NT5C1B,NT5C1B,NT5C1B,NT5C1B-RDH14,NT5C1B-RDH14	4871,-705895,4871,4871,4871,4871,4871,4871
chr13:48881710-48882340	chr13	+	48882024	48882216	True	NM_000321,NM_001162498	chr13,chr13	+,-	RB1,LPAR6	-4195,105497
chr13:108928445-108929865	chr13	+	108928478	108929787	True	NM_006573,NM_001145645,NM_001098268	chr13,chr13,chr13	+,+,-	TNFSF13B,TNFSF13B,LIG4	-6552,-6552,-57762
chr17:4712522-4712763	chr17	+	4712594	4712668	True	NM_002663,NM_182566	chr17,chr17	+,-	PLD2,VMO1	-2225,-22865
chr1:179113450-179113979	chr1	+	179113688	179113991	True	NM_022371,NM_001168239,NM_001136000,NM_005158	chr1,chr1,chr1,chr1	+,-,-,-	TOR3A,ABL2,ABL2,ABL2	-62634,-1464,-1464,-1464
chrX:151883605-151884071	chrX	+	151883610	151884028	True	NM_001129826,NM_004909,NM_005361,NM_175742,NM_001129828,NM_175743,NM_153488,NM_001080848	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,+,+,-,+,+,-	CSAG3,CSAG2,MAGEA2,MAGEA2,CSAG3,MAGEA2,MAGEA2B,CSAG2	-5940,-5863,-542,-542,-5863,-542,1355,-5863
chrX:151883605-151884071	chrX	-	151921454	151921872	False	NM_001129826,NM_004909,NM_005361,NM_175742,NM_001129828,NM_175743,NM_153488,NM_001080848	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,-,-,+,-,-,+	CSAG3,CSAG2,MAGEA2,MAGEA2,CSAG3,MAGEA2,MAGEA2B,CSAG2	5938,5861,542,542,5861,542,-1355,5861
chr10:65020507-65021059	chr10	+	65020781	65021059	True	NM_004241,NM_030759	chr10,chr10	-,+	JMJD1C,NRBF2	7973,-127832
chr19:18146066-18146787	chr19	+	18146096	18146216	True	NM_015683,NM_005535	chr19,chr19	+,-	ARRDC2,IL12RB1	-27175,51535
chr2:233561168-233561634	chr2	+	233561266	233561656	True	NM_015575,NM_001172416,NM_001103146,NM_001103147,NM_001103148	chr2,chr2,chr2,chr2,chr2	+,-,+,+,+	GIGYF2,KCNJ13,GIGYF2,GIGYF2,GIGYF2	358,79669,358,358,358
chr21:44868268-44868879	chr21	+	44868408	44868926	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	977,-21406
chr15:55786700-55788144	chr15	+	55786893	55788123	True	NM_001198784,NR_037923	chr15,chr15	+,-	FLJ27352,DYX1C1-CCPG1	-86228,2721
chr2:113013152-113014875	chr2	+	113013270	113014526	True	NM_032494,NM_198581	chr2,chr2	-,+	ZC3H8,ZC3H6	-606,18651
chr12:25101480-25101803	chr12	+	25101584	25101826	True	NM_005504,NM_001204126,NM_001178091,NM_001178092	chr12,chr12,chr12,chr12	-,+,-,-	BCAT1,LRMP,BCAT1,BCAT1	617,103354,617,617
chr5:83012705-83014180	chr5	+	83012888	83014140	True	NM_001884,NM_004385	chr5,chr5	-,+	HAPLN1,VCAN	2806,-245447
chr12:76740735-76741908	chr12	+	76740734	76741858	True	NM_015336,NM_024685	chr12,chr12	+,-	ZDHHC17,BBS10	415995,414
chr2:70485456-70485712	chr2	+	70485550	70485634	True	NM_016297,NM_022173,NM_022037	chr2,chr2,chr2	+,-,-	PCYOX1,TIA1,TIA1	-370,-9771,-9771
chr7:38669836-38670492	chr7	+	38669889	38670410	True	NM_001635,NM_139316,NM_001166018	chr7,chr7,chr7	-,-,+	AMPH,AMPH,POU6F2	808,808,347198
chr14:96119350-96120501	chr14	+	96119386	96120494	True	NM_001098725,NR_028288	chr14,chr14	-,+	TCL1A,TCL6	60089,-1933
chr20:32890100-32890564	chr20	+	32890099	32890442	True	NM_001672,NM_000687,NM_001161766	chr20,chr20,chr20	+,-,-	ASIP,AHCY,AHCY	-41979,826,9219
chr6:116892669-116893013	chr6	+	116892705	116893061	True	NM_001007464,NM_016104,NM_001139444,NM_015952	chr6,chr6,chr6,chr6	+,+,-,+	RWDD1,RWDD1,BET3L,RWDD1	-173,-173,-25932,-173
chr17:27950266-27950585	chr17	+	27950343	27950452	True	NM_032854,NM_152345	chr17,chr17	-,+	CORO6,ANKRD13B	-1902,-29867
chr2:111337321-111338472	chr2	+	111337327	111338510	True	NM_001142807,NM_005054,NM_001123363,NM_032260,NM_001037866	chr2,chr2,chr2,chr2,chr2	+,-,-,-,-	ACOXL,RGPD5,RGPD6,RGPD5,RGPD6	151639,-2649,-1018,-1018,-1018
chr2:111337321-111338472	chr2	-	110548133	110549316	False	NM_178584,NM_005054,NM_001037866,NM_032260,NM_001123363	chr2,chr2,chr2,chr2,chr2	-,+,+,+,+	SEPT10,RGPD5,RGPD6,RGPD5,RGPD6	-176350,2649,1018,1018,1018
chr2:111337321-111338472	chr2	-	109304316	109305408	False	NM_022336,NM_006267	chr2,chr2	-,+	EDAR,RANBP2	300470,30528
chr15:55788172-55789513	chr15	+	55788495	55789515	True	NM_001198784,NR_037923	chr15,chr15	+,-	FLJ27352,DYX1C1-CCPG1	-87831,1317
chr5:109026198-109026425	chr5	+	109026218	109026468	True	NM_014819,NM_002372	chr5,chr5	-,+	PJA2,MAN2A1	-280543,-1113
chr9:136083341-136083671	chr9	+	136083421	136083670	True	NM_014581,NR_001275	chr9,chr9	-,+	OBP2B,CELP	1008,-125546
chr6:36163839-36164212	chr6	+	36163941	36164163	True	NM_001010903,NM_015695	chr6,chr6	-,+	C6orf222,BRPF3	140549,386
chr19:46085508-46086499	chr19	+	46086332	46086416	True	NM_003370,NM_001017989,NM_025136	chr19,chr19,chr19	+,-,-	VASP,OPA3,OPA3	-75695,1764,1764
chr12:1738261-1738763	chr12	+	1738270	1738812	True	NM_032642,NR_037422	chr12,chr12	+,-	WNT5B,MIR3649	49,30784
chr4:156129774-156130014	chr4	+	156129786	156130049	True	NM_000910,NM_001039580	chr4,chr4	+,-	NPY2R,MAP9	-56,168123
chr4:119455330-119456469	chr4	+	119455855	119456434	True	NR_003135,NM_003619	chr4,chr4	+,-	CEP170P1,PRSS12	-18414,-181933
chr3:174590176-174591135	chr3	+	174590191	174590932	True	NM_207015,NM_031955	chr3,chr3	+,-	NAALADL2,SPATA16	-13144,-1731133
chr22:38477778-38477994	chr22	+	38477782	38478034	True	NM_013356,NM_012407	chr22,chr22	-,+	SLC16A8,PICK1	1186,-24571
chr2:96811839-96812047	chr2	+	96811914	96812056	True	NM_004418,NM_001037228,NM_001002036	chr2,chr2,chr2	-,+,-	DUSP2,LOC285033,ASTL	-735,93920,-7739
chr15:90776334-90776555	chr15	+	90776338	90776558	True	NM_001013657,NM_006384	chr15,chr15	+,-	C15orf58,CIB1	928,771
chr19:11876555-11877214	chr19	+	11876749	11876997	True	NM_152355,NM_001080493	chr19,chr19	+,-	ZNF441,ZNF823	817,-26989
chr16:692950-693635	chr16	+	693133	693545	True	NM_001040165,NM_001040160,NM_001040161,NM_001040162,NM_138418,NM_145294,NM_032366	chr16,chr16,chr16,chr16,chr16,chr16,chr16	-,-,-,-,+,+,-	C16orf13,C16orf13,C16orf13,C16orf13,FAM195A,WDR90,C16orf13	-6786,-6786,-6786,-6786,-1335,5817,-6786
chr10:27445246-27445828	chr10	+	27445290	27445379	True	NM_032844,NM_014263,NM_001172304,NM_001172303,NM_139312	chr10,chr10,chr10,chr10,chr10	+,-,+,+,-	MASTL,YME1L1,MASTL,MASTL,YME1L1	-1592,-1969,-1592,-1592,-1969
chr18:75704535-75705543	chr18	+	75704774	75705450	True	NM_001480,NM_001025100	chr18,chr18	+,-	GALR1,MBP	-742817,-860000
chr3:99594550-99594905	chr3	+	99594606	99594824	True	NM_014890,NM_032359	chr3,chr3	-,+	FILIP1L,C3orf26	272,-57991
chr12:109531504-109532096	chr12	+	109531508	109531765	True	NM_001205179,NM_080911,NM_001205180,NM_001145375,NM_001145374,NM_003362,NM_001001655,NR_026930,NR_026931	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,+,-,-,-,+,-,-,-	ALKBH2,UNG,ALKBH2,ALKBH2,ALKBH2,UNG,ALKBH2,ALKBH2,ALKBH2	-215,3633,-215,-215,-215,4157,-215,-215,-215
chr11:11863062-11863271	chr11	+	11863120	11863320	True	NM_017944,NM_001018057	chr11,chr11	+,-	USP47,DKK3	-201,166916
chr13:80055737-80056053	chr13	+	80055783	80056033	True	NM_019080,NM_001161407,NM_022118	chr13,chr13,chr13	+,+,-	NDFIP2,NDFIP2,RBM26	-575,-575,-75860
chr19:35741600-35742828	chr19	+	35741643	35742708	True	NM_205835,NM_015925,NM_152481,NM_205834	chr19,chr19,chr19,chr19	+,+,-,+	LSR,LSR,FAM187B,LSR	-2135,-2135,-22015,-2135
chr19:55867834-55868273	chr19	+	55868043	55868135	True	NM_144613,NM_032701,NM_001145402	chr19,chr19,chr19	-,+,-	COX6B2,SUV420H2,FAM71E2	-1861,-16873,6535
chr1:162476509-162477467	chr1	+	162476661	162477245	True	NM_175866,NM_053282,NM_144624,NM_001184763	chr1,chr1,chr1,chr1	+,-,+,+	UHMK1,SH2D1B,UHMK1,UHMK1	-9121,-94733,-9121,-9752
chr8:21989439-21989777	chr8	+	21989457	21989791	True	NM_005144,NM_001172357,NM_018411,NM_025232	chr8,chr8,chr8,chr8	-,+,-,-	HR,SFTPC,HR,REEP4	-892,29392,-892,9707
chr22:45636914-45637280	chr22	+	45636950	45637184	True	NM_001009880,NM_001167574	chr22,chr22	-,+	KIAA0930,UPK3A	-300,43683
chr22:46733550-46733904	chr22	+	46733640	46733864	True	NR_024009,NM_018006	chr22,chr22	-,+	CN5H6.4,TRMU	-41083,-2393
chr1:157017589-157018915	chr1	+	157017849	157018671	True	NM_198236,NM_014784,NR_001560	chr1,chr1,chr1	-,-,+	ARHGEF11,ARHGEF11,CYCSP52	-2687,-2687,79482
chr17:3303376-3304253	chr17	+	3303394	3304056	True	NM_012373,NM_003553	chr17,chr17	+,-	OR3A3,OR1E1	19805,-1690
chr7:56665602-56666744	chr7	+	56665607	56666575	True	NR_029420,NR_026929	chr7,chr7	-,+	LOC650226,DKFZp434L192	-149539,-101742
chr9:100880350-100880735	chr9	+	100880371	100880719	True	NM_018946,NM_014788,NM_033219,NM_033220	chr9,chr9,chr9,chr9	+,-,-,-	NANS,TRIM14,TRIM14,TRIM14	-61463,811,811,819
chr2:242499570-242499811	chr2	+	242499569	242499793	True	NR_033346,NM_032515	chr2,chr2	-,+	BOK-AS1,BOK	-1011,-1428
chr16:20912082-20912316	chr16	+	20912082	20912340	True	NM_001128301,NM_001128302,NM_173475,NM_020424	chr16,chr16,chr16,chr16	+,+,-,+	LYRM1,LYRM1,DCUN1D3,LYRM1	-58,-58,-521,-576
chr3:10805047-10805329	chr3	+	10805143	10805288	True	NR_027102,NM_014229	chr3,chr3	-,+	LOC285370,SLC6A11	646,52628
chr3:48647166-48647574	chr3	+	48647226	48647472	True	NM_033629,NM_003365	chr3,chr3	+,-	TREX1,UQCRC1	-140048,-128
chr20:3193671-3193966	chr20	+	3193691	3193886	True	NM_033453,NM_181493,NM_023935	chr20,chr20,chr20	+,+,-	ITPA,ITPA,DDRGK1	-3686,-3686,-8396
chr3:187867272-187868059	chr3	+	187867499	187868049	True	NR_036497,NM_001167672	chr3,chr3	-,+	LOC339929,LPP	3877,3613
chr11:43964029-43964295	chr11	+	43964089	43964161	True	NM_021926,NM_001145033	chr11,chr11	-,+	ALX4,C11orf96	367605,-34
chr2:209333132-209334928	chr2	+	209333399	209334940	True	NM_005896,NM_005048	chr2,chr2	-,+	IDH1,PTH2R	-213593,-61902
chr8:145688839-145689077	chr8	+	145688843	145689035	True	NM_145754,NM_138496,NM_032687,NM_001129888	chr8,chr8,chr8,chr8	+,-,-,-	KIFC2,CYHR1,CYHR1,CYHR1	2702,1433,1864,2046
chr2:20250670-20251138	chr2	+	20250675	20251030	True	NM_014713,NR_033875	chr2,chr2	-,+	LAPTM4A,FLJ12334	809,-182111
chr19:18657357-18658237	chr19	+	18657408	18658195	True	NM_012181,NM_001171948	chr19,chr19	-,+	FKBP8,C19orf50	-3025,10376
chr8:143544267-143544829	chr8	+	143544281	143544621	True	NM_145003,NM_001702	chr8,chr8	-,+	TSNARE1,BAI1	-59738,755
chr4:147767512-147768695	chr4	+	147767518	147768626	True	NM_004575,NM_031956	chr4,chr4	+,-	POU4F2,TTC29	-207525,98472
chrX:106107839-106108198	chrX	+	106108033	106108150	True	NM_001171092,NM_001171706	chrX,chrX	+,-	CLDN2,RIPPLY1	35243,38476
chr11:62359292-62359543	chr11	+	62359329	62359407	True	NM_004739,NM_022830,NM_000327	chr11,chr11,chr11	-,-,+	MTA2,TUT1,ROM1	9946,-220,20805
chr7:56559455-56560383	chr7	+	56559463	56560113	True	NR_029420,NR_026929	chr7,chr7	-,+	LOC650226,DKFZp434L192	-43395,3802
chr11:125757982-125758383	chr11	+	125758064	125758388	True	NM_001134793,NM_145014,NM_031307	chr11,chr11,chr11	+,+,-	HYLS1,HYLS1,PUS3	-1160,-4606,14778
chr14:75420170-75421080	chr14	+	75420209	75421099	True	NM_014239,NM_002632	chr14,chr14	+,-	EIF2B2,PGF	48512,1242
chr17:25798496-25798732	chr17	+	25798506	25798716	True	NM_014238,NM_000625	chr17,chr17	+,-	KSR1,NOS2	319,328889
chr6:36973091-36973578	chr6	+	36973251	36973521	True	NM_173558,NM_014341	chr6,chr6	+,-	FGD2,MTCH1	-51,-19302
chr14:58707657-58708044	chr14	+	58707792	58707946	True	NM_152132,NM_002788,NR_029434	chr14,chr14,chr14	+,+,-	PSMA3,PSMA3,FLJ31306	3646,3646,56969
chr11:14541747-14542101	chr11	+	14541799	14542009	True	NM_001143937,NM_002786,NM_000922	chr11,chr11,chr11	-,-,+	PSMA1,PSMA1,PDE3B	32,32,123259
chr19:54106683-54107410	chr19	+	54106734	54107446	True	NM_001012728,NR_002938	chr19,chr19	+,-	DPRX,LOC284379	27863,-15
chrY:4868833-4869048	chrY	+	4868854	4869080	True	NM_032971,NR_001540	chrY,chrY	+,-	PCDH11Y,TTTY23	-638,1242621
chrY:4868833-4869048	chrX	+	91034927	91035117	False	NM_032967,NM_004538	chrX,chrX	+,-	PCDH11X,NAP1L3	-719,1893615
chr1:177132103-177133391	chr1	+	177132308	177133220	True	NM_207108,NM_004319,NM_021165	chr1,chr1,chr1	-,-,+	ASTN1,ASTN1,FAM5B	854,854,7412
chr19:5680485-5680696	chr19	+	5680493	5680727	True	NM_205767,NM_198708,NM_033643,NM_198533,NM_015414,NM_198706,NM_198707,NM_198704,NM_198705	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,+,+,+,+,+,+,+,+	C19orf70,HSD11B1L,RPL36,HSD11B1L,RPL36,HSD11B1L,HSD11B1L,HSD11B1L,HSD11B1L	234,347,9544,319,9618,347,324,307,307
chr16:9055271-9055549	chr16	+	9055377	9055566	True	NM_003470,NM_014117	chr16,chr16	-,+	USP7,C16orf72	1832,129970
chr2:202104138-202104485	chr2	+	202104163	202104500	True	NM_001080124,NM_033355,NM_001127391,NM_001228,NM_033358	chr2,chr2,chr2,chr2,chr2	+,+,-,+,+	CASP8,CASP8,ALS2CR12,CASP8,CASP8	-6053,-6053,117651,-6053,-6053
chr18:13914482-13915571	chr18	+	13914728	13915620	True	NM_005913,NM_000529	chr18,chr18	+,-	MC5R,MC2R	-89236,-35
chr17:36956353-36956756	chr17	+	36956504	36956708	True	NM_003559,NM_002795	chr17,chr17	-,+	PIP4K2B,PSMB3	-346,-47559
chr15:79295770-79296378	chr15	+	79295855	79296409	True	NM_153815,NM_206839	chr15,chr15	-,+	RASGRF1,MORF4L1	1643,-130734
chr4:120988607-120988876	chr4	+	120988658	120988912	True	NM_002358,NR_037630	chr4,chr4	-,+	MAD2L1,LOC645513	-645,-612773
chr15:76304178-76305590	chr15	+	76304237	76305495	True	NM_138573,NM_152335	chr15,chr15	-,+	NRG4,C15orf27	98,46803
chr17:20653483-20654258	chr17	+	20653714	20654264	True	NM_001190790,NM_001004306	chr17,chr17	+,-	CDRT15L2,CCDC144NL	-170729,145241
chr6:62923670-62925579	chr6	+	62924369	62925418	True	NM_001190706,NM_152688	chr6,chr6	+,-	MTRNR2L9,KHDRBS2	-640418,70733
chr22:37309044-37309597	chr22	+	37309071	37309597	True	NM_000395,NM_002854	chr22,chr22	+,-	CSF2RB,PVALB	77,-93554
chr18:72200298-72201056	chr18	+	72200438	72201052	True	NR_024484,NM_032649	chr18,chr18	-,+	LOC400657,CNDP1	64069,639
chr3:139108533-139108943	chr3	+	139108589	139108983	True	NM_004766,NR_023350,NM_020191	chr3,chr3,chr3	-,-,+	COPB2,COPB2,MRPS22	-67,-67,-45779
chr4:40632991-40633549	chr4	+	40633146	40633580	True	NM_001098634,NM_024677	chr4,chr4	-,+	RBM47,NSUN7	-1263,118333
chr7:37023159-37025145	chr7	+	37023352	37025132	True	NM_001039459,NM_130442,NM_018685	chr7,chr7,chr7	-,-,+	ELMO1,ELMO1,ANLN	128,652,-593974
chr4:17523263-17524616	chr4	+	17523382	17524446	True	NM_001079827,NM_000320	chr4,chr4	+,-	CLRN2,QDPR	-6645,-9525
chr1:45252700-45253089	chr1	+	45252770	45253113	True	NR_001456,NR_001457,NM_153274	chr1,chr1,chr1	+,+,-	SNORD38A,SNORD38B,BEST4	-9307,-8759,363
chrX:20162653-20163681	chrX	+	20162768	20163730	True	NR_023358,NM_001173456,NM_001412	chrX,chrX,chrX	-,+,-	SCARNA9L,PDHA1,EIF1AX	-8237,-800808,-2802
chr12:54445327-54446251	chr12	+	54445343	54446125	True	NM_153633,NR_026655,NR_026658	chr12,chr12,chr12	+,+,-	HOXC4,FLJ12825,LOC100240735	1535,5912,29532
chr2:238538273-238538751	chr2	+	238538510	238538796	True	NM_001137550,NR_033308	chr2,chr2	+,-	LRRFIP1,RAB17	-2337,-38741
chr1:167599928-167600399	chr1	+	167600004	167600326	True	NM_052862,NM_003851	chr1,chr1	+,-	RCSD1,CREG1	-582,-76948
chr20:39666797-39667551	chr20	+	39666847	39667310	True	NM_015035,NM_003286	chr20,chr20	-,+	ZHX3,TOP1	261480,-9443
chr1:8880612-8882345	chr1	+	8880650	8882207	True	NM_001215,NM_001042681,NM_012102	chr1,chr1,chr1	+,-,-	CA6,RERE,RERE	123714,-2951,-2951
chr19:5722425-5722758	chr19	+	5722446	5722809	True	NM_004793,NM_152784	chr19,chr19	-,+	LONP1,TMEM146	-2270,-1816
chr1:1240832-1241207	chr1	+	1241030	1241090	True	NM_030649,NM_153339	chr1,chr1	-,+	ACAP3,PUSL1	2229,2903
chr19:43361173-43362445	chr19	+	43361697	43362339	True	NR_026824,NR_036584	chr19,chr19	-,+	PSG10P,LOC100289650	-1827,-35734
chr2:99801657-99803044	chr2	+	99801891	99802699	True	NM_145212,NR_028356,NM_138798	chr2,chr2,chr2	+,+,-	MRPL30,MRPL30,MITD1	-4406,-4406,-4399
chr12:53012941-53014047	chr12	+	53013025	53013680	True	NM_002284,NM_175068	chr12,chr12	+,-	KRT86,KRT73	-317427,-682
chr12:117349197-117350059	chr12	+	117349227	117349965	True	NM_012174,NM_003806,NM_153348	chr12,chr12,chr12	+,-,+	FBXW8,HRK,FBXW8	-517,-29995,-517
chr16:23163103-23163824	chr16	+	23163106	23163740	True	NM_001039,NM_020718	chr16,chr16	+,-	SCNN1G,USP31	30299,-2515
chr3:135685814-135687289	chr3	+	135685970	135687299	True	NM_002718,NM_001145417,NM_001190447	chr3,chr3,chr3	+,-,+	PPP2R3A,MSL2,PPP2R3A	-1506,226061,-1506
chr3:122289498-122290914	chr3	+	122289534	122290569	True	NM_031458,NM_138287,NM_001146106,NM_001146105,NM_001146104,NM_001146103,NM_001146102,NM_001113523	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-,-,+	PARP9,DTX3L,PARP9,PARP9,PARP9,PARP9,PARP9,PARP15	-6011,-6408,-6340,-6387,-6340,-6011,-6387,5879
chrX:139587309-139587646	chrX	+	139587311	139587654	True	NR_028345,NM_005634	chrX,chrX	+,-	RP1-177G6.2,SOX3	204269,-86
chr2:88828699-88828958	chr2	+	88828715	88828947	True	NM_152670,NM_001135649	chr2,chr2	+,-	C2orf51,FOXI3	-4597,-76662
chr19:3801670-3801872	chr19	+	3801684	3801888	True	NM_172251,NM_002378	chr19,chr19	+,-	MRPL54,MATK	-39070,26
chr1:228294577-228295333	chr1	+	228294625	228295303	True	NM_181456,NM_181454,NM_181455,NM_181441,NR_037415,NM_181465,NM_181464,NM_024319,NM_181463,NM_181462	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,+,-,-,-,-,-	MRPL55,MRPL55,MRPL55,MRPL55,MIR3620,MRPL55,MRPL55,C1orf35,MRPL55,MRPL55	1760,1760,1760,1760,-9712,1760,1760,-3603,1760,1760
chr10:135239621-135240973	chr10	+	135239635	135240591	True	NR_002934,NM_001012508	chr10,chr10	+,-	LOC619207,SPRN	26840,-1514
chr10:135239621-135240973	chr10	+	135384430	135385391	False	NM_001143764,NR_033789,NM_001143763,NM_130784,NM_000773	chr10,chr10,chr10,chr10,chr10	-,-,-,-,+	SYCE1,SPRNP1,SYCE1,SYCE1,CYP2E1	-5292,-968,-5292,-1554,-43614
chr17:79195483-79195710	chr17	+	79195485	79195665	True	NM_001009811,NM_014984,NM_001086521	chr17,chr17,chr17	-,-,+	AZI1,AZI1,C17orf89	1136,1136,17445
chr1:224543863-224544502	chr1	+	224544377	224544529	True	NM_014184,NM_206840	chr1,chr1	+,-	CNIH4,NVL	65,-26505
chr10:6131349-6131577	chr10	+	6131449	6131535	True	NM_001145547,NM_032905,NM_000417	chr10,chr10,chr10	+,+,-	RBM17,RBM17,IL2RA	-191,-551,-27116
chr11:62607073-62607281	chr11	+	62607083	62607329	True	NM_003164,NM_018093,NM_001012662	chr11,chr11,chr11	-,-,+	STX5,WDR74,SLC3A2	-7523,349,16154
chr11:31377516-31378661	chr11	+	31377528	31377608	True	NM_181706,NM_181807	chr11,chr11	+,-	DNAJC24,DCDC1	13768,13799
chr11:66188109-66188356	chr11	+	66188117	66188371	True	NM_178864,NM_016050	chr11,chr11	+,-	NPAS4,MRPL11	103,17989
chr22:31316110-31316513	chr22	+	31316274	31316553	True	NM_014941,NR_026920	chr22,chr22	-,+	MORC2,C22orf27	47684,1741
chr19:16998972-16999415	chr19	+	16999105	16999213	True	NM_003950,NM_015692	chr19,chr19	+,-	F2RL3,CPAMD8	612,138462
chr2:30380507-30382207	chr2	+	30380550	30382195	True	NM_004304,NM_016061	chr2,chr2	-,+	ALK,YPEL5	-236073,-10859
chr14:30395830-30396035	chr14	+	30395842	30396039	True	NM_017769,NM_002742	chr14,chr14	+,-	G2E3,PRKD1	632289,911
chr1:119639977-119641355	chr1	+	119640057	119641034	True	NM_001005783,NM_015836	chr1,chr1	+,-	HAO2,WARS2	270367,42323
chr12:117798170-117798435	chr12	+	117798180	117798454	True	NM_000620,NM_001204218,NM_153348	chr12,chr12,chr12	-,-,+	NOS1,NOS1,FBXW8	1203,1203,-449470
chr3:10856425-10857629	chr3	+	10856498	10857614	True	NR_027102,NM_014229	chr3,chr3	-,+	LOC285370,SLC6A11	-50621,302
chr1:44680483-44680765	chr1	+	44680554	44680788	True	NM_019100,NM_001034023,NM_001034024,NM_024066	chr1,chr1,chr1,chr1	+,+,+,-	DMAP1,DMAP1,DMAP1,ERI3	-1480,-1480,-1480,140201
chr11:119020717-119021485	chr11	+	119020829	119021411	True	NM_001145018,NM_022169,NM_001142505	chr11,chr11,chr11	-,+,+	CCDC153,ABCG4,ABCG4	45223,-1130,-581
chr4:49330764-49332085	chr4	+	49330838	49331208	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-342624,-422023
chr4:49330764-49332085	chr4	-	49283088	49283458	False	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-294874,-374273
chr10:46223906-46224389	chr10	+	46224308	46224432	True	NM_174890,NM_015262,NM_001169106,NM_001169107	chr10,chr10,chr10,chr10	-,+,+,+	ANUBL1,FAM21C,FAM21C,FAM21C	-56057,-1718,-1718,-1718
chr10:46223906-46224389	chr10	+	51829305	51829386	False	NM_018232,NM_001005751,NM_001143974	chr10,chr10,chr10	+,+,-	FAM21B,FAM21A,ASAH2	8499,-1679,179037
chr6:110778049-110778949	chr6	+	110778059	110778876	True	NM_015891,NM_033125	chr6,chr6	+,-	CDC40,SLC22A16	-276488,19023
chr16:2690320-2692153	chr16	+	2690423	2692049	True	NR_024492,NM_031948	chr16,chr16	+,-	FLJ42627,PRSS27	-1499,78556
chr16:2690320-2692153	chr16	-	2608144	2609770	False	NR_036139,NM_031268	chr16,chr16	-,+	MIR3178,PDPK1	-26138,-20228
chr15:76004628-76004950	chr15	+	76004704	76004764	True	NM_175881,NM_001897	chr15,chr15	+,-	ODF3L1,CSPG4	11554,475
chr15:76004628-76004950	chr15	-	78171344	78171402	False	NM_001101404,NR_027024	chr15,chr15	+,-	SH2D7,LOC645752	213524,47836
chr15:31197036-31197395	chr15	+	31197044	31197430	True	NM_017762,NM_014967,NM_001146095,NM_001146094,NM_001146096	chr15,chr15,chr15,chr15,chr15	-,+,+,+,+	MTMR10,FAN1,FAN1,FAN1,FAN1	86427,-1019,-1040,-1019,-1019
chr20:43737820-43738864	chr20	+	43737906	43738716	True	NM_145652,NM_002251,NM_002638	chr20,chr20,chr20	-,-,+	WFDC5,KCNS1,PI3	5137,-8153,64823
chr12:53098659-53099345	chr12	+	53098964	53099393	True	NM_199187,NM_175078	chr12,chr12	+,-	KRT18,KRT77	243261,-1717
chr8:37308689-37309657	chr8	+	37308760	37309650	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	243650,295964
chr5:156695408-156696183	chr5	+	156695514	156696229	True	NM_001037333,NM_001037332,NM_001001343,NM_014376	chr5,chr5,chr5,chr5	+,+,-,+	CYFIP2,CYFIP2,FNDC9,CYFIP2	-2475,-2379,76550,132
chr2:120771305-120772316	chr2	+	120771364	120772351	True	NM_020909,NM_001184937,NM_001184938,NM_001184939,NR_000034	chr2,chr2,chr2,chr2,chr2	+,+,+,+,-	EPB41L5,EPB41L5,EPB41L5,EPB41L5,TMEM185B	-815,-815,-634,-815,208683
chr19:35628652-35629094	chr19	+	35628833	35629111	True	NM_005031,NM_021902,NM_139284,NM_022006	chr19,chr19,chr19,chr19	+,+,-,+	FXYD1,FXYD1,LGI4,FXYD7	1280,620,-2655,5042
chr6:37401954-37402543	chr6	+	37402065	37402252	True	NM_015050,NM_138493	chr6,chr6	+,-	FTSJD2,C6orf129	-1209,65499
chr17:39970068-39971328	chr17	+	39970450	39970884	True	NM_006455,NM_021939	chr17,chr17	-,+	LEPREL4,FKBP10	-1999,-1539
chr10:7875936-7877666	chr10	+	7876398	7877395	True	NM_012311,NM_031923	chr10,chr10	-,+	KIN,TAF3	-46454,-15786
chr17:48557382-48558133	chr17	+	48557555	48558151	True	NM_018346,NM_001267	chr17,chr17	+,-	RSAD1,CHAD	-1416,-11328
chr19:3504284-3504503	chr19	+	3504283	3504412	True	NM_031304,NM_016263,NM_001145165	chr19,chr19,chr19	-,+,-	DOHH,FZR1,DOHH	-3662,1882,-3345
chr3:52011909-52012364	chr3	+	52012041	52012331	True	NM_001198898,NM_001198896,NM_000666,NM_001198895,NM_001146314,NR_027476,NM_015407,NM_001198897,NR_037192,NM_032750	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,-,-,+,+,+,-	ACY1,ACY1,ACY1,ACY1,ABHD14B,ABHD14B,ABHD14A,ACY1,ABHD14A-ACY1,ABHD14B	4968,4968,4968,4968,-3395,-3395,-3050,4968,-3050,-3395
chrX:50659216-50659486	chrX	+	50659215	50659485	True	NM_005448,NR_027121	chrX,chrX	+,-	BMP15,SHROOM4	-5531,-102171
chr11:33059840-33060551	chr11	+	33059973	33060213	True	NM_018393,NM_001145541,NM_001326	chr11,chr11,chr11	+,+,-	TCP11L1,TCP11L1,CSTF3	749,1347,122878
chrX:100854052-100854411	chrX	+	100854095	100854431	True	NM_001009584,NM_016607	chrX,chrX	-,+	ARMCX6,ARMCX3	18610,23688
chrX:100854052-100854411	chrX	-	100869325	100869661	False	NM_019007,NM_001009584,NM_001184768,NR_033670,NM_016607,NM_177948,NM_177947,NR_033669	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,+,+,+,-	ARMCX6,ARMCX6,ARMCX6,ARMCX6,ARMCX3,ARMCX3,ARMCX3,ARMCX6	3380,3380,3380,3380,8458,8689,8458,3380
chr19:4911473-4911811	chr19	+	4911509	4911857	True	NM_001080523,NM_001048201,NM_013282	chr19,chr19,chr19	-,+,+	ARRDC5,UHRF1,UHRF1	-8630,-2058,-1002
chr12:113574874-113575331	chr12	+	113574880	113575126	True	NM_001144872,NM_001193521,NM_004658,NM_001193520	chr12,chr12,chr12,chr12	+,-,-,-	CCDC42B,RASAL1,RASAL1,RASAL1	12536,-1321,-836,-836
chr19:40005026-40005707	chr19	+	40005283	40005615	True	NM_152361,NM_182704	chr19,chr19	-,+	EID2B,SELV	17929,137
chr3:93698771-93699010	chr3	+	93698780	93699056	True	NM_144996,NM_000313,NM_182896,NM_001174151,NM_001174150,NR_033427	chr3,chr3,chr3,chr3,chr3,chr3	+,-,+,+,+,+	ARL13B,PROS1,ARL13B,ARL13B,ARL13B,ARL13B	30,-5846,30,30,30,30
chr18:23728795-23730490	chr18	+	23728837	23730196	True	NM_005637,NM_144662	chr18,chr18	-,+	SS18,PSMA8	-58226,-15072
chr11:45909385-45910409	chr11	+	45909474	45910217	True	NM_005456,NM_001080446	chr11,chr11	+,-	MAPK8IP1,C11orf94	-2323,18673
chr2:33701710-33702637	chr2	+	33701745	33702668	True	NM_015475,NM_001139488	chr2,chr2	-,+	FAM98A,RASGRP3	121744,-476
chr6:153297569-153297881	chr6	+	153297571	153297792	True	NM_194435,NM_012177,NM_001142522	chr6,chr6,chr6	+,-,-	VIP,FBXO5,FBXO5	-225690,6470,7007
chr3:107800549-107802529	chr3	+	107800561	107802463	True	NM_198793,NR_015394,NM_001777	chr3,chr3,chr3	-,+,-	CD47,LOC285205,CD47	7522,-198572,7522
chr2:178125821-178126112	chr2	+	178125922	178126045	True	NM_194247,NM_006164,NR_036075,NM_001145412,NM_001145413	chr2,chr2,chr2,chr2,chr2	+,-,-,-,-	HNRNPA3,NFE2L2,MIR3128,NFE2L2,NFE2L2	-48551,3865,-5184,2623,2623
chr1:57343170-57344724	chr1	+	57343169	57344740	True	NM_000562,NM_001004303	chr1,chr1	+,-	C8A,C1orf168	-22777,-57800
chr1:227918845-227920038	chr1	+	227918885	227919797	True	NR_024485,NR_024486,NM_053052,NM_001161465,NM_023007	chr1,chr1,chr1,chr1,chr1	+,+,+,-,-	LOC100130093,LOC100130093,SNAP47,JMJD4,JMJD4	-2696,-2696,2899,3365,3365
chr22:45897642-45898108	chr22	+	45897713	45897854	True	NM_001996,NM_006485,NM_006487,NM_006486,NM_148674	chr22,chr22,chr22,chr22,chr22	+,+,+,+,-	FBLN1,FBLN1,FBLN1,FBLN1,SMC1B	864,864,864,864,-88213
chr2:34065135-34066483	chr2	+	34065242	34065970	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-326351,-111958
chr15:40652398-40653839	chr15	+	40652416	40653673	True	NM_207380,NM_001145643,NM_033510	chr15,chr15,chr15	-,+,+	C15orf52,PHGR1,DISP2	-19248,-9233,-2033
chr1:19597866-19598549	chr1	+	19598096	19598542	True	NM_001145289,NM_201252,NM_016183	chr1,chr1,chr1	-,-,+	AKR7L,AKR7L,MRTO4	2078,2078,-20074
chr7:150019662-150020034	chr7	+	150019914	150020060	True	NM_001142928,NM_138434,NM_001164458,NM_023942	chr7,chr7,chr7,chr7	+,+,-,+	LRRC61,C7orf29,ACTR3C,LRRC61	235,6877,748,235
chr19:14491945-14492183	chr19	+	14491995	14492083	True	NM_078481,NM_001025160,NM_001204057,NM_001784	chr19,chr19,chr19,chr19	+,+,-,+	CD97,CD97,DDX39A,CD97	129,129,37873,129
chr17:38466785-38467206	chr17	+	38466792	38467152	True	NM_000964,NM_001145301,NM_001145302,NM_152219	chr17,chr17,chr17,chr17	+,+,+,-	RARA,RARA,RARA,GJD3	-1420,7320,7320,53849
chr8:7712611-7713041	chr8	+	7712736	7713086	True	NM_152250,NM_001081552,NM_058203	chr8,chr8,chr8	-,+,+	DEFB105A,SPAG11A,SPAG11B	-31376,-7386,-7386
chr8:7712611-7713041	chr8	-	7313504	7313854	False	NM_001040703,NM_016512,NM_058206,NM_058207,NM_058200,NM_058201,NM_058202,NM_058203	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	+,-,-,-,-,-,-,-	DEFB105B,SPAG11B,SPAG11B,SPAG11B,SPAG11B,SPAG11B,SPAG11B,SPAG11B	31388,7389,-3617,-3617,7389,7389,7389,7389
chr8:8021379-8022907	chr8	+	8021902	8022860	True	NR_031689,NR_024362	chr8,chr8	-,+	MIR548I3,FLJ10661	-75291,63231
chr8:8021379-8022907	chr8	-	12357836	12358793	False	NR_026789,NM_001137610	chr8,chr8	+,-	FAM66A,FAM86B2	-138363,-63984
chr16:58125266-58125599	chr16	+	58125397	58125559	True	NM_013242,NM_002428	chr16,chr16	-,+	C16orf80,MMP15	37789,-66172
chr3:155871554-155873361	chr3	+	155871610	155872976	True	NM_003471,NM_004733	chr3,chr3	+,-	KCNAB1,SLC33A1	-10917,-299362
chr13:84456256-84457256	chr13	+	84456297	84457268	True	NM_015567,NM_052910	chr13,chr13	+,-	SLITRK5,SLITRK1	3867601,-64
chrX:54384427-54384905	chrX	+	54384574	54384918	True	NM_001002838,NM_020922,NM_058163	chrX,chrX,chrX	-,-,+	WNK3,WNK3,TSR2	-136,-136,81934
chrX:24152996-24153441	chrX	+	24153061	24153204	True	NM_030624,NM_001178086	chrX,chrX	-,+	KLHL15,ZFX	-107758,14557
chrX:24152996-24153441	chrX	+	23991784	23991927	False	NM_030624,NM_152761	chrX,chrX	-,+	KLHL15,CXorf58	53427,-65712
chr16:1275538-1275760	chr16	+	1275662	1275808	True	NM_012467,NM_024164,NM_003294	chr16,chr16,chr16	-,-,+	TPSG1,TPSB2,TPSAB1	-408,4427,14869
chr16:8801720-8802194	chr16	+	8801803	8802113	True	NM_000663,NM_015421	chr16,chr16	+,-	ABAT,TMEM186	4712,89450
chr19:39279985-39280219	chr19	+	39280087	39280181	True	NM_002307,NM_001042507	chr19,chr19	-,+	LGALS7,LGALS7B	-15930,-288
chr19:39279985-39280219	chr19	-	39263817	39263911	False	NM_002307,NM_001042507	chr19,chr19	-,+	LGALS7,LGALS7B	296,15938
chr12:6739862-6740619	chr12	+	6739924	6740572	True	NM_001164094,NM_001142961,NM_020400	chr12,chr12,chr12	+,-,-	COPS7A,LPAR5,LPAR5	92577,293,4775
chr1:182644766-182645632	chr1	+	182644779	182645647	True	NM_001102450,NM_033345,NR_036490	chr1,chr1,chr1	-,-,+	RGS8,RGS8,LOC284648	-2712,-2712,-60555
chr3:101569333-101569568	chr3	+	101569385	101569600	True	NM_000986,NM_031419	chr3,chr3	-,+	RPL24,NFKBIZ	-163822,-1086
chr20:60640699-60640973	chr20	+	60640788	60640872	True	NM_144703,NM_003185	chr20,chr20	+,-	LSM14B,TAF4	56644,44
chr9:5989084-5990178	chr9	+	5989919	5990211	True	NM_001017969,NM_005511	chr9,chr9	-,+	KIAA2026,MLANA	17842,-99062
chr5:151067594-151069076	chr5	+	151067910	151069026	True	NM_003118,NM_005754	chr5,chr5	-,+	SPARC,G3BP1	-1393,82449
chr17:18644164-18644790	chr17	+	18644388	18644820	True	NM_001145045,NM_031456	chr17,chr17	-,+	ZNF286B,FBXW10	-58816,2505
chr17:18644164-18644790	chr17	-	15525566	15525972	False	NM_006382,NM_001130842	chr17,chr17	-,+	CDRT1,ZNF286A	-2548,76918
chr13:103247244-103248582	chr13	+	103247428	103248548	True	NM_003291,NM_001010977	chr13,chr13	+,-	TPP2,METTL21C	737,98357
chr12:106409633-106410596	chr12	+	106409777	106410531	True	NM_014840,NM_152772	chr12,chr12	-,+	NUAK1,TCP11L2	123330,286049
chr3:9404987-9405299	chr3	+	9405123	9405214	True	NM_001114092,NM_015453,NR_027007	chr3,chr3,chr3	+,+,-	THUMPD3,THUMPD3,LOC440944	-457,-457,34011
chr1:174128497-174128705	chr1	+	174128497	174128737	True	NM_172071,NM_014857	chr1,chr1	-,+	RC3H1,RABGAP1L	-166287,86
chr1:6266520-6266731	chr1	+	6266567	6266737	True	NM_000983,NM_207396	chr1,chr1	-,+	RPL22,RNF207	-6888,-429
chr12:93825930-93826799	chr12	+	93826013	93826658	True	NM_003348,NM_014050	chr12,chr12	-,+	UBE2N,MRPL42	9427,34611
chr12:6377849-6378637	chr12	+	6377910	6378478	True	NM_018173,NM_001065	chr12,chr12	+,-	PLEKHG6,TNFRSF1A	41123,72856
chr17:73585119-73585330	chr17	+	73585211	73585277	True	NR_003587,NM_020753	chr17,chr17	+,-	MYO15B,CASKIN2	-1123,-73584
chr16:2517915-2518125	chr16	+	2517931	2518123	True	NM_001199107,NM_006181,NM_020705,NM_001048212,NM_025108	chr16,chr16,chr16,chr16,chr16	+,+,+,-,+	TBC1D24,NTN3,TBC1D24,CEMP1,C16orf59	7023,3376,7023,63336,-7867
chr9:103791984-103792455	chr9	+	103792019	103792486	True	NM_207299,NM_001127610	chr9,chr9	+,-	LPPR1,BAAT	-1039,353365
chr19:22323105-22324992	chr19	+	22323134	22324999	True	NM_001001411,NM_033468	chr19,chr19	-,+	ZNF676,ZNF257	54804,-87919
chr6:96463244-96463467	chr6	+	96463323	96463465	True	NM_001143957,NM_006581	chr6,chr6	-,+	GPR63,FUT9	821938,379
chr7:139025793-139026065	chr7	+	139025814	139026016	True	NR_033999,NM_197964	chr7,chr7	-,+	LOC100129148,C7orf55	86306,32
chr5:176840573-176840783	chr5	+	176840576	176840820	True	NM_000505,NM_001004105	chr5,chr5	-,+	F12,GRK6	-3999,12866
chr17:43660257-43660792	chr17_ctg5_hap1	-	1240379	1240479	False	NR_026901,NR_037772	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LOC644172,CRHR1	-51991,-69926
chr17:43660257-43660792	chr17_ctg5_hap1	+	491332	491446	False	NM_001193465,NM_014834	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	KIAA1267,LRRC37A	72051,-32728
chr17:43660257-43660792	chr17	+	43660389	43660676	True	NR_026901,NR_037772	chr17,chr17	-,+	LOC644172,CRHR1	19122,37033
chr15:85146521-85146758	chr15	+	85146524	85146600	True	NM_017894,NM_001007072,NM_181877,NR_003661	chr15,chr15,chr15,chr15	+,+,+,-	ZSCAN2,ZSCAN2,ZSCAN2,UBE2Q2P1	-2334,-2334,-2334,-32498
chr17:9809803-9811065	chr17	+	9809913	9810782	True	NM_004246,NM_002903	chr17,chr17	+,-	GLP2R,RCVRN	-80583,-1229
chr17:79882631-79882895	chr17	+	79882764	79882892	True	NM_002359,NM_016538,NR_015454,NM_032711	chr17,chr17,chr17,chr17	-,-,+,-	MAFG,SIRT7,LOC92659,MAFG	2746,-6706,2812,-1356
chr4:141183541-141184551	chr4	+	141183558	141184517	True	NM_018717,NM_032547	chr4,chr4	-,+	MAML3,SCOC	-108325,-5178
chr19:16305380-16306254	chr19	+	16305401	16305922	True	NM_014077,NM_001130524,NM_032493,NM_054113	chr19,chr19,chr19,chr19	+,+,+,-	FAM32A,AP1M1,AP1M1,CIB3	-9218,2742,2742,-21115
chr2:228499891-228500496	chr2	+	228500049	228500189	True	NM_020161,NM_004504,NM_001162483	chr2,chr2,chr2	-,+,-	C2orf83,AGFG1,C2orf83	-2013,-163214,-2013
chr10:24534039-24534651	chr10	+	24534098	24534465	True	NM_020824,NR_023388	chr10,chr10	-,+	ARHGAP21,PRINS	478185,1588
chr5:140553539-140554146	chr5	+	140553591	140553809	True	NM_019120,NM_020957,NM_031947,NM_018940	chr5,chr5,chr5,chr5	+,+,-,+	PCDHB8,PCDHB16,SLC25A2,PCDHB7	3620,7170,129853,-1401
chr1:156612013-156612416	chr1	+	156612245	156612431	True	NM_198427,NM_006617,NM_021948	chr1,chr1,chr1	+,-,+	BCAN,NES,BCAN	-556,34808,-556
chr13:76113012-76114197	chr13	+	76113211	76114099	True	NM_203497,NM_203495,NM_006002	chr13,chr13,chr13	-,-,+	COMMD6,COMMD6,UCHL3	-1220,-1220,9827
chr16:71922358-71923292	chr16	+	71922440	71923269	True	NM_014761,NM_017530,NM_001201554,NM_001201556,NM_001201552,NM_001201553	chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,-,-,-	KIAA0174,ZNF821,ZNF821,ZNF821,ZNF821,ZNF821	6176,-4996,-4347,-4347,-4347,-4996
chr2:122287178-122287410	chr2	+	122287177	122287408	True	NR_023343,NM_001142273	chr2,chr2	+,-	RNU4ATAC,CLASP1	1047,119697
chr12:34175617-34176717	chr12	+	34175883	34176721	True	NM_198992,NM_032834	chr12,chr12	-,+	SYT10,ALG10	-583129,-719
chr12:34175617-34176717	chr12	+	38711837	38711887	False	NM_001013620,NM_153634	chr12,chr12	+,-	ALG10B,CPNE8	-1331,587583
chr1:14735024-14736690	chr1	+	14735079	14736287	True	NM_015209,NR_027136	chr1,chr1	+,-	KAZN,C1orf126	188925,742723
chr6:35526002-35527603	chr6	+	35526246	35527510	True	NM_003322,NM_007104	chr6,chr6	-,+	TULP1,RPL10A	-45599,-90128
chr1:26757533-26757963	chr1	+	26757751	26757873	True	NM_024887,NM_205861,NM_173574	chr1,chr1,chr1	+,+,-	DHDDS,DHDDS,ZNF683	928,928,-58485
chr9:5822106-5823514	chr9	+	5822295	5823552	True	NM_024896,NM_005511	chr9,chr9	-,+	ERMP1,MLANA	9580,67356
chr3:128711540-128712170	chr3	+	128711554	128712090	True	NM_020741,NM_024768	chr3,chr3	-,+	KIAA1257,CCDC48	946,8381
chr17:16123170-16123383	chr17	+	16123169	16123330	True	NM_004278,NM_006311	chr17,chr17	+,-	PIGL,NCOR1	-2717,-4295
chr16:126890-127496	chr16	+	126982	127514	True	NM_001015052,NM_022450,NM_002434,NM_001015054	chr16,chr16,chr16,chr16	+,-,+,+	MPG,RHBDF1,MPG,MPG	654,-4353,654,-15
chr11:67160132-67160472	chr11	+	67160215	67160477	True	NM_002708,NM_001008709,NM_004584,NM_206873	chr11,chr11,chr11,chr11	-,-,+,-	PPP1CA,PPP1CA,RAD9A,PPP1CA	8949,8949,-843,8949
chr14:76612985-76614139	chr14	+	76613194	76614124	True	NM_017972,NM_003239,NM_017926	chr14,chr14,chr14	+,-,+	C14orf118,TGFB3,C14orf118	4134,-165102,4134
chr21:39634691-39636307	chr21	+	39634892	39636258	True	NM_002243,NM_005867,NM_170737,NM_170736	chr21,chr21,chr21,chr21	+,-,+,+	KCNJ15,DSCR4,KCNJ15,KCNJ15	-6287,-141438,8170,-6081
chr15:34630460-34630774	chr15	+	34630474	34630565	True	NM_133647,NM_001042496,NM_001042497,NM_001042494,NM_001042495,NM_018648,NM_175741	chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,-,-,-,-,+	SLC12A6,SLC12A6,SLC12A6,SLC12A6,SLC12A6,NOP10,C15orf55	-1429,-513,-1429,-513,-209,4850,7500
chr17:30409643-30410535	chr19	-	14360783	14360881	False	NM_014921,NM_001025160	chr19,chr19	-,+	LPHN1,CD97	-43786,131331
chr17:30409643-30410535	chr17	+	30409899	30410458	True	NR_033412,NR_002222	chr17,chr17	+,-	SH3GL1P1,ARGFXP2	-42601,68189
chr17:30409643-30410535	chr17	+	28993878	28993976	False	NR_033420,NM_015986	chr17,chr17	+,-	SH3GL1P2,CRLF3	-42599,157852
chr7:158800776-158801116	chr7	+	158800806	158801070	True	NM_003382	chr7	-	VIPR2	136629
chr16:4744708-4745165	chr16	+	4744824	4745114	True	NM_001193452,NM_032349,NM_133450	chr16,chr16,chr16	+,+,-	NUDT16L1,NUDT16L1,ANKS3	-1181,-1181,39099
chr16:16858142-16858851	chr16	+	16858151	16858827	True	NR_036447,NM_001079528	chr16,chr16	+,-	PKD1P1,ABCC6	-446743,-540823
chr1:116660075-116661839	chr1	+	116660309	116661744	True	NM_152367,NM_005599	chr1,chr1	+,-	MAB21L3,NHLH2	-5984,-276562
chr17:15580422-15581455	chr17	+	15580457	15580951	True	NM_006470,NM_001130842	chr17,chr17	-,+	TRIM16,ZNF286A	5292,21939
chr17:15580422-15581455	chr17	-	18608015	18608247	False	NM_001145045,NM_001037330	chr17,chr17	-,+	ZNF286B,TRIM16L	-22443,17154
chr1:79457993-79459551	chr1	+	79458058	79459185	True	NM_022159,NM_006417	chr1,chr1	-,+	ELTD1,IFI44	13374,-342640
chr15:42693246-42693947	chr15	+	42693400	42693926	True	NM_022473,NM_173090,NM_173088,NM_173089	chr15,chr15,chr15,chr15	-,+,+,+	ZFP106,CAPN3,CAPN3,CAPN3	55854,3050,661,3050
chr5:115389277-115389808	chr5	+	115389305	115389792	True	NR_033363,NM_001195581	chr5,chr5	-,+	ATG12,LOC644100	-211757,-2193
chrX:71357282-71358451	chrX	+	71357364	71358057	True	NM_207422,NM_001024455	chrX,chrX	+,-	FLJ44635,RGAG4	5976,-5613
chr1:32674372-32674735	chr1	+	32674397	32674721	True	NM_001160042,NM_018134,NM_001099434,NM_024296,NM_019118	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	IQCC,IQCC,DCDC2B,CCDC28B,TMEM234	-3212,-3212,-1,-8246,13255
chr2:224702787-224703129	chr2	+	224702792	224702935	True	NM_022915,NM_001039569	chr2,chr2	+,-	MRPL44,AP1S3	119185,-473
chr12:6053254-6053529	chr12	+	6053253	6053525	True	NM_020373,NM_001769	chr12,chr12	-,+	ANO2,CD9	1923,255956
chr12:77164571-77165801	chr12	+	77164727	77165841	True	NM_001321,NM_015336	chr12,chr12	-,+	CSRP2,ZDHHC17	107008,-6931
chr7:15505205-15506463	chr7	+	15505346	15506500	True	NM_001195280,NM_001004320	chr7,chr7	+,-	LOC100506049,AGMO	1060004,95198
chr19:56108129-56108919	chr19	+	56108400	56108797	True	NM_153219,NM_032836	chr19,chr19	+,-	ZNF524,FIZ1	2932,2146
chr9:79117869-79118293	chr9	+	79117882	79118264	True	NM_018339,NM_001097636	chr9,chr9	-,+	RFK,GCNT1	-108438,-2384
chr8:182979-183977	chr8	+	183279	183950	True	NM_001042416,NM_001042415,NR_003572,NM_173539	chr8,chr8,chr8,chr8	+,+,-,+	ZNF596,ZNF596,RPL23AP53,ZNF596	-946,-946,-961,-1130
chr5:78813550-78814102	chr5	+	78813615	78814146	True	NM_004272,NM_001114393	chr5,chr5	-,+	HOMER1,PAPD4	-3915,94096
chr15:75639372-75639575	chr15	+	75639372	75639573	True	NR_030360,NM_024608	chr15,chr15	-,+	MIR631,NEIL1	6506,-92
chr1:101704617-101705450	chr1	+	101704620	101705334	True	NM_001400,NM_015958	chr1,chr1	+,-	S1PR1,DPH5	-2366,-213258
chr11:32458000-32458353	chr11	+	32458131	32458336	True	NM_024426,NM_001198551,NM_024424,NR_023920,NM_000378,NM_001198552	chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,+,-,-	WT1,WT1,WT1,WT1-AS,WT1,WT1	-1050,-5768,-1050,-897,-1050,-5768
chr16:89938125-89938510	chr16	+	89938149	89938457	True	NM_001018112,NM_014972	chr16,chr16	-,+	FANCA,TCF25	-55084,1536
chr17:33680127-33680759	chr17	+	33680234	33680536	True	NM_144975,NM_001104587	chr17,chr17	+,-	SLFN5,SLFN11	-110206,20234
chr17:33680127-33680759	chr17	+	33768713	33768763	False	NM_144682,NR_003037,NM_018042	chr17,chr17,chr17	-,+,-	SLFN13,SNORD7,SLFN12	7143,131912,-9170
chr6:78173139-78173370	chr6	+	78173159	78173405	True	NM_000863,NM_001010844	chr6,chr6	-,+	HTR1B,IRAK1BP1	-39,1403783
chr19:48326747-48327200	chr19	+	48326812	48327248	True	NM_000554,NM_198479	chr19,chr19	+,-	CRX,TPRX1	-1764,-19951
chr6:26467142-26467433	chr6	+	26467143	26467402	True	NM_001197233,NM_001197234,NM_078476,NM_003543,NM_007049	chr6,chr6,chr6,chr6,chr6	+,+,+,-,+	BTN2A1,BTN2A1,BTN2A1,HIST1H4H,BTN2A1	-9017,-9042,-9042,-181416,-9042
chr16:21691019-21691554	chr16	+	21691047	21691460	True	NM_144672,NM_001161683,NM_005849	chr16,chr16,chr16	+,+,-	OTOA,OTOA,IGSF6	-1273,4289,-27075
chr5:94955698-94955968	chr5	+	94955728	94955840	True	NM_031952,NM_199243	chr5,chr5	-,+	SPATA9,GPR150	62924,139
chr10:102267059-102267769	chr10	+	102267088	102267709	True	NM_017902,NM_015490	chr10,chr10	+,-	HIF1AN,SEC31B	27931,11937
chr7:23624971-23625763	chr7	+	23625048	23625798	True	NM_138771,NR_002711	chr7,chr7	+,-	CCDC126,CLK2P	11199,398
chr5:178204609-178204928	chr5	+	178204682	178204976	True	NR_024035,NM_058230	chr5,chr5	-,+	AACSP1,ZNF354B	-1405,81977
chr3:99535378-99536654	chr3	+	99535776	99536502	True	NM_014890,NM_032359	chr3,chr3	-,+	FILIP1L,C3orf26	58598,175
chr12:56324443-56325310	chr12	+	56324527	56325204	True	NM_001345,NM_032345,NM_001143853,NM_201554,NM_201444,NM_201445	chr12,chr12,chr12,chr12,chr12,chr12	+,-,-,+,+,+	DGKA,WIBG,WIBG,DGKA,DGKA,DGKA	74,-2830,-3618,607,607,607
chr2:88370384-88371293	chr2	+	88370741	88371093	True	NM_016618,NM_198274	chr2,chr2	-,+	KRCC1,SMYD1	-15493,-3506
chr19:51764835-51766745	chr19	+	51765013	51766417	True	NM_173635,NM_001163922	chr19,chr19	+,-	C19orf75,VSIG10L	-4106,79022
chr2:216971872-216972526	chr2	+	216972022	216972560	True	NM_018441,NM_021141	chr2,chr2	-,+	PECR,XRCC5	-25483,1459
chr2:107142619-107143960	chr2	+	107142772	107143921	True	NM_001144013,NR_003506	chr2,chr2	-,+	RGPD3,PLGLA	-57971,-140062
chr6:168598743-168599733	chr6	+	168598785	168599691	True	NM_030615,NM_024919	chr6,chr6	+,-	KIF25,FRMD1	-180283,-118946
chr16:85146161-85147172	chr16	+	85146496	85147047	True	NR_033984,NM_198491	chr16,chr16	+,-	LOC400548,FAM92B	23708,-382
chr22:38505744-38505994	chr22	+	38505755	38505969	True	NM_012407,NM_025045	chr22,chr22	+,-	PICK1,BAIAP2L2	-52544,757
chr6:110527432-110528237	chr6	+	110527558	110528185	True	NM_003931,NM_015891	chr6,chr6	-,+	WASF1,CDC40	-26351,-26001
chr9:115246637-115247798	chr9	+	115246640	115247819	True	NR_036085,NM_133465	chr9,chr9	-,+	MIR3134,KIAA1958	-134095,1428
chr5:138773113-138773725	chr5	+	138773212	138773632	True	NM_001033112,NM_152686	chr5,chr5	+,-	PAIP2,DNAJC18	-95130,1632
chr1:15272334-15272705	chr1	+	15272369	15272741	True	NM_001017999,NR_027136	chr1,chr1	+,-	KAZN,C1orf126	-5,206269
chr1:32402507-32402973	chr1	+	32402524	32402986	True	NM_006559,NM_080391	chr1,chr1	+,-	KHDRBS1,PTP4A2	76504,1052
chr3:190156888-190158577	chr3	+	190157208	190158312	True	NM_207316,NM_006580	chr3,chr3	-,+	TMEM207,CLDN16	9403,-51598
chr18:55866501-55866760	chr18	+	55866508	55866736	True	NM_001144970,NM_005603	chr18,chr18	+,-	NEDD4L,ATP8B1	-3922,-396181
chr2:88342027-88343279	chr2	+	88342336	88343160	True	NM_016618,NM_198274	chr2,chr2	-,+	KRCC1,SMYD1	12144,24138
chr20:31347992-31348319	chr20	+	31348119	31348188	True	NM_006892,NM_175848,NM_175849,NM_053041	chr20,chr20,chr20,chr20	+,+,+,-	DNMT3B,DNMT3B,DNMT3B,COMMD7	2002,2002,2002,-16305
chr11:9627846-9628773	chr11	+	9627861	9628773	True	NR_036539,NM_001143976	chr11,chr11	-,+	LOC644656,WEE1	-145616,-31678
chr1:235494939-235496601	chr1	+	235495081	235496502	True	NM_031371,NM_001037277,NM_016374,NR_036605,NM_004837	chr1,chr1,chr1,chr1,chr1	-,+,-,+,+	ARID4B,GGPS1,ARID4B,GGPS1,GGPS1	-3549,-3380,-3549,-3264,-3264
chr19:58445639-58446310	chr19	+	58445951	58446293	True	NM_133460,NR_036508	chr19,chr19	-,+	ZNF418,LOC100128398	497,67968
chr2:216875373-216875673	chr2	+	216875385	216875545	True	NM_018000,NM_001142310	chr2,chr2	-,+	MREG,TMEM169	2859,71043
chr11:61248446-61248799	chr11	+	61248551	61248795	True	NM_001136040,NM_145017,NM_001170753	chr11,chr11,chr11	-,+,+	CPSF7,C11orf66,C11orf66	-51087,-17,-17
chr20:17946110-17946854	chr20	+	17946405	17946837	True	NR_003045,NM_152227,NM_014426,NM_052865	chr20,chr20,chr20,chr20	-,-,-,+	SNORD17,SNX5,SNX5,C20orf72	-2816,2703,2367,2924
chr20:55927972-55928576	chr20	+	55927991	55928624	True	NM_001190472,NM_001015885,NM_003610	chr20,chr20,chr20	-,+,+	MTRNR2L3,RAE1,RAE1	6304,-1428,-1901
chr12:54347055-54347700	chr12	+	54347065	54347538	True	NM_173860,NR_003716	chr12,chr12	+,-	HOXC12,HOTAIR	1175,15027
chr6:117089545-117091201	chr6	+	117089728	117090873	True	NM_001085480,NM_002269	chr6,chr6	-,+	FAM162B,KPNA5	-2842,-87424
chrX:111324656-111325086	chrX	+	111324690	111325124	True	NM_012471,NM_001004308	chrX,chrX	-,+	TRPC5,ZCCHC16	930,1128
chr7:26456389-26457013	chr7	+	26456624	26457058	True	NR_022006,NR_015364	chr7,chr7	-,+	KIAA0087,LOC441204	121436,-13568
chr15:50715269-50715721	chr15	+	50715395	50715759	True	NM_005154,NM_181427,NM_001128611,NM_001128610	chr15,chr15,chr15,chr15	+,-,+,+	USP8,GABPB1,USP8,USP8	819,-67790,819,819
chr12:22487194-22487489	chr12	+	22487255	22487537	True	NM_018686,NM_003034	chr12,chr12	+,-	CMAS,ST8SIA1	-288147,161
chr19:36706128-36707414	chr19	+	36706242	36706942	True	NM_001042474,NM_007145,NM_152477,NM_001099638,NM_001099639	chr19,chr19,chr19,chr19,chr19	-,+,-,+,+	ZNF565,ZNF146,ZNF565,ZNF146,ZNF146	-256,-789,-676,-789,-789
chr3:32234582-32235479	chr3	+	32234912	32235498	True	NM_017784,NM_178868	chr3,chr3	-,+	OSBPL10,CMTM8	-211570,44672
chr8:54935105-54935371	chr8	+	54935151	54935289	True	NM_201437,NM_014175,NM_006756	chr8,chr8,chr8	-,+,-	TCEA1,MRPL15,TCEA1	-143,112491,-143
chr8:70435960-70436417	chr8	+	70436025	70436459	True	NM_001128206,NM_001146009	chr8,chr8	+,-	SULF1,SLCO5A1	-31048,308995
chr8:131414612-131416093	chr8	+	131414706	131416140	True	NM_015137,NM_018482	chr8,chr8	+,-	EFR3A,ASAP1	1500215,-489
chr1:28051769-28052248	chr1	+	28051781	28052247	True	NM_152660,NM_022873,NM_001143915,NM_001143914,NM_001143913,NM_001143912	chr1,chr1,chr1,chr1,chr1,chr1	+,-,+,+,+,+	FAM76A,IFI6,FAM76A,FAM76A,FAM76A,FAM76A	242,-53057,242,242,242,242
chr10:44144535-44145141	chr10	+	44144617	44145111	True	NM_001005368,NM_145312,NM_006973	chr10,chr10,chr10	-,+,-	ZNF32,ZNF485,ZNF32	-465,-42813,-291
chr9:125486633-125486965	chr9	+	125486658	125486954	True	NM_001004450,NM_001005235	chr9,chr9	-,+	OR1B1,OR1L4	-94844,-448
chr9:125486633-125486965	chr9	+	125512586	125512636	False	NM_005388,NM_001004453	chr9,chr9	-,+	PDCL,OR1L6	78349,-510
chr15:52128812-52130595	chr15	+	52129003	52130637	True	NM_014547,NM_001143917	chr15,chr15	+,-	TMOD3,LYSMD2	-7229,-85353
chr2:209132661-209134321	chr2	+	209132751	209134348	True	NM_015040,NM_005896,NM_152671,NM_001178000	chr2,chr2,chr2,chr2	+,-,+,+	PIKFYVE,IDH1,PIKFYVE,PIKFYVE	-1812,-12945,-1812,-1812
chr10:45646682-45647036	chr10	+	45646798	45647072	True	NR_033891,NR_024472	chr10,chr10	+,-	LOC338579,LOC100133308	3037,3022
chr6:105850137-105850444	chr6	+	105850181	105850443	True	NR_037157,NM_002726	chr6,chr6	+,-	C6orf112,PREP	-264670,606
chr1:19186090-19186668	chr1	+	19186193	19186685	True	NM_001135254,NM_152232	chr1,chr1	+,-	PAX7,TAS1R2	-228744,-38
chr1:150776998-150778037	chr1	+	150777184	150777870	True	NM_000396,NM_001145415	chr1,chr1	-,+	CTSK,SETDB1	3097,120944
chr4:49514578-49514907	chr4	+	49514679	49514760	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-526474,-605864
chr8:22851928-22852739	chr8	+	22851949	22852787	True	NM_015178,NM_001160037,NM_001160036,NM_144962	chr8,chr8,chr8,chr8	+,+,+,-	RHOBTB2,RHOBTB2,RHOBTB2,PEBP4	4304,573,-7070,-66528
chr1:154183246-154183573	chr1	+	154183246	154183455	True	NM_015449,NM_138740,NM_014847,NM_001098616,NM_001010979,NM_001127320	chr1,chr1,chr1,chr1,chr1,chr1	-,-,+,-,-,+	C1orf43,C1orf43,UBAP2L,C1orf43,C1orf189,UBAP2L	9875,9875,9869,9875,-4437,9199
chr10:97203067-97203349	chr10	+	97203264	97203405	True	NM_006434,NM_207321,NM_001034956,NM_001034957,NM_001034954,NM_001034955	chr10,chr10,chr10,chr10,chr10,chr10	-,+,-,-,-,-	SORBS1,C10orf129,SORBS1,SORBS1,SORBS1,SORBS1	-2327,-249364,-2327,-2327,-2327,-2327
chr3:155572056-155572357	chr3	+	155572145	155572367	True	NM_001190992,NM_004733,NM_003875	chr3,chr3,chr3	-,-,+	SLC33A1,SLC33A1,GMPS	-35,-35,15957
chr17:3500631-3501179	chr17	+	3500656	3500824	True	NM_080705,NM_080706,NM_018727,NM_001031681	chr17,chr17,chr17,chr17	-,-,-,+	TRPV1,TRPV1,TRPV1,CTNS	-1531,-4485,-320,38937
chr3:187417015-187417353	chr3	+	187417149	187417385	True	NR_034062,NM_001004312	chr3,chr3	+,-	LOC100131635,RTP2	2768,3010
chr6:2763986-2764288	chr6	+	2764005	2764087	True	NM_001012418,NM_020135,NM_130395	chr6,chr6,chr6	-,+,+	MYLK4,WRNIP1,WRNIP1	-12851,1578,1578
chr3:23245104-23245337	chr3	+	23245265	23245357	True	NM_020345,NM_152653	chr3,chr3	-,+	NKIRAS1,UBE2E2	713230,-538
chr11:118086940-118087904	chr11	+	118087158	118087882	True	NM_001098526,NM_153206,NM_000733	chr11,chr11,chr11	-,-,+	AMICA1,AMICA1,CD3E	7977,-3084,87412
chr10:105114301-105114676	chr10	+	105114458	105114533	True	NM_006951,NM_032154,NM_001011663	chr10,chr10,chr10	+,-,-	TAF5,PCGF6,PCGF6	13190,-3567,-3567
chr17:79888326-79888805	chr17	+	79888662	79888854	True	NM_002359,NM_006907,NM_032711,NM_153824,NR_015454	chr17,chr17,chr17,chr17,chr17	-,-,-,-,+	MAFG,PYCR1,MAFG,PYCR1,LOC92659	-3074,6164,-7254,6164,-3008
chr3:58655273-58655592	chr3	+	58655499	58655605	True	NM_138805,NM_153331	chr3,chr3	-,+	FAM3D,KCTD6	-2938,-171465
chr17:78073986-78075026	chr17	+	78074005	78074940	True	NM_001079804,NM_001079803,NM_014740,NM_000152	chr17,chr17,chr17,chr17	+,+,-,+	GAA,GAA,EIF4A3,GAA	414,414,46092,414
chr11:12694511-12695155	chr11	+	12694792	12695182	True	NM_021961,NM_013253	chr11,chr11	+,-	TEAD1,DKK3	786,-663875
chr3:133753886-133755421	chr3	+	133754227	133755403	True	NM_021203,NM_005630	chr3,chr3	+,-	SRPRB,SLCO2A1	-251401,-5307
chr8:91095151-91096334	chr8	+	91095239	91096227	True	NM_004929,NM_001359	chr8,chr8	-,+	CALB1,DECR1	-132,-81710
chr15:86681065-86682615	chr15	+	86681072	86682589	True	NM_022480,NM_152336	chr15,chr15	-,+	KLHL25,AGBL1	-342883,2652
chr2:85637198-85637479	chr2	+	85637204	85637474	True	NM_001747,NM_198482	chr2,chr2	-,+	CAPG,SH2D6	252,24443
chrX:106169391-106171054	chrX	+	106169508	106171025	True	NM_001171095,NM_138382,NM_020384	chrX,chrX,chrX	+,-,+	CLDN2,RIPPLY1,CLDN2	-7977,-22947,-5961
chr19:38893095-38893625	chr19	+	38893466	38893572	True	NM_152657,NM_174905	chr19,chr19	-,+	GGN,FAM98C	-14798,202
chr16:14014447-14015271	chr16	+	14014589	14015305	True	NM_005236,NM_001134477	chr16,chr16	+,-	ERCC4,PARN	-629,708865
chr8:64078973-64079615	chr8	+	64079397	64079670	True	NM_152758,NM_000370	chr8,chr8	+,-	YTHDF3,TTPA	1450,-80785
chr17:7018629-7018897	chr17	+	7018679	7018863	True	NM_080913,NM_080912,NM_001181,NM_080914,NM_001201352,NM_201566	chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,+	ASGR2,ASGR2,ASGR2,ASGR2,ASGR2,SLC16A13	-549,-549,-549,-1050,-549,-79336
chr3:58478714-58480319	chr3	+	58478992	58479998	True	NM_153331,NM_003500,NM_001128214	chr3,chr3,chr3	+,-,+	KCTD6,ACOX2,KCTD6	4093,42994,-1221
chr12:9756179-9756800	chr12	+	9756364	9756848	True	NM_002258,NR_002814	chr12,chr12	-,+	KLRB1,LOC374443	3699,43794
chr2:231728617-231729515	chr2	+	231728755	231729413	True	NM_001012516,NM_030926,NM_001012514,NM_005683	chr2,chr2,chr2,chr2	+,+,+,-	ITM2C,ITM2C,ITM2C,GPR55	207,207,207,60578
chr2:84807502-84809023	chr2	+	84807522	84809060	True	NM_003849,NM_001370	chr2,chr2	-,+	SUCLG1,DNAH6	-120936,-63994
chr19:50553706-50554076	chr19	+	50553748	50553998	True	NM_016440,NR_027257	chr19,chr19	-,+	VRK3,FLJ26850	-24943,-38
chr17:62074928-62075171	chr17	+	62074988	62075184	True	NM_001164257,NM_001191029,NM_001191031,NM_001191030,NM_000873	chr17,chr17,chr17,chr17,chr17	+,+,+,+,-	C17orf72,C17orf72,C17orf72,C17orf72,ICAM2	526,526,526,526,9149
chr2:238475763-238476086	chr2	+	238475792	238475996	True	NM_015893,NM_022449	chr2,chr2	+,-	PRLH,RAB17	-626,23823
chr9:38394025-38394599	chr9	+	38394236	38394576	True	NM_001007563,NM_000692	chr9,chr9	-,+	IGFBPL1,ALDH1B1	29918,-1589
chr21:43915302-43915836	chr21	+	43915336	43915838	True	NM_080860,NM_018964	chr21,chr21	-,+	RSPH1,SLC37A1	613,3903
chr4:106394438-106394641	chr4	+	106394441	106394639	True	NR_003586,NM_176869,NM_006903,NM_176867,NM_176866	chr4,chr4,chr4,chr4,chr4	+,-,-,-,-	EEF1A1P9,PPA2,PPA2,PPA2,PPA2	11223,638,638,638,638
chr3:179281326-179281662	chr3	+	179281358	179281664	True	NM_177989,NM_020409,NM_004301,NM_178042	chr3,chr3,chr3,chr3	+,-,+,+	ACTL6A,MRPL47,ACTL6A,ACTL6A	-701,40820,-701,-701
chr22:22987677-22988844	chr22	+	22987681	22988857	True	NM_199127,NR_024591	chr22,chr22	+,-	GGTLC2,POM121L1P	54,-669
chr22:22987677-22988844	chr22	-	24646517	24646567	False	NM_001099782,NM_001099781,NM_004121,NR_003714	chr22,chr22,chr22,chr22	-,-,-,+	GGT5,GGT5,GGT5,POM121L9P	-5407,-5407,-5407,1021
chr22:22987677-22988844	chr22	+	25022278	25022328	False	NR_024593,NR_024494	chr22,chr22	-,+	POM121L10P,BCRP3	32836,6553
chr1:206974162-206974930	chr1	+	206974273	206974950	True	NM_153758,NM_000572	chr1,chr1	+,-	IL19,IL10	-2109,-28434
chr22:41254827-41256293	chr22	+	41255053	41256331	True	NM_001204827,NM_022098,NM_145174,NM_003932	chr22,chr22,chr22,chr22	+,+,-,-	XPNPEP3,XPNPEP3,DNAJB7,ST13	-2019,-2019,1849,-2366
chr20:30033637-30034414	chr20	+	30033728	30034430	True	NM_001037500,NM_153324	chr20,chr20	-,+	DEFB124,DEFB123	26436,-5368
chr7:158647639-158648995	chr7	+	158647689	158648977	True	NM_020728,NM_018051	chr7,chr7	-,+	ESYT2,WDR60	-25370,291
chr8:53326372-53326622	chr8	+	53326396	53326602	True	NM_014682,NM_005285	chr8,chr8	-,+	ST18,NPBWR1	-3957,525865
chr10:124894868-124895128	chr10	+	124894962	124895082	True	NM_022466,NM_001105574	chr10,chr10	-,+	IKZF5,HMX3	-126651,484
chr10:115317966-115318888	chr10	+	115317966	115318404	True	NM_006175,NM_004132,NM_001177660	chr10,chr10,chr10	-,+,+	NRAP,HABP2,HABP2	105451,-5242,-7430
chr1:231303361-231304733	chr1	+	231303622	231304726	True	NM_152379,NM_001004342	chr1,chr1	-,+	C1orf131,TRIM67	72248,-5011
chr20:19996770-19997055	chr20	+	19996895	19997051	True	NM_181527,NM_181528,NM_016100,NM_016652	chr20,chr20,chr20,chr20	+,+,+,-	NAA20,NAA20,NAA20,CRNKL1	1491,885,885,39697
chr1:47186083-47187800	chr1	+	47186293	47187738	True	NM_014774,NM_001145474	chr1,chr1	-,+	KIAA0494,C1orf223	-1557,-48844
chr14:25519595-25520358	chr14	+	25519718	25520291	True	NM_015299,NM_014178	chr14,chr14	+,-	KHNYN,STXBP6	-620628,-623
chr13:111768811-111770133	chr13	+	111768827	111769900	True	NM_001113512,NM_145735,NM_001113511,NM_017664	chr13,chr13,chr13,chr13	+,+,+,-	ARHGEF7,ARHGEF7,ARHGEF7,ANKRD10	-1259,-1259,-1259,-201411
chr4:166308682-166310682	chr4	+	166309161	166310720	True	NR_030304,NR_026575,NM_001873	chr4,chr4,chr4	+,-,+	MIR578,GK3P,CPE	-1825,-107986,-9122
chr19:12444306-12444908	chr19	+	12444409	12444957	True	NM_003437,NM_145276	chr19,chr19	+,-	ZNF136,ZNF563	-170588,47
chr2:233320344-233320603	chr2	+	233320474	233320630	True	NM_001631,NM_004826	chr2,chr2	+,-	ALPI,ECEL1	202,31952
chr11:45945586-45946090	chr11	+	45945705	45946126	True	NM_152312,NM_004813,NM_057174	chr11,chr11,chr11	+,-,-	GYLTL1B,PEX16,PEX16	-2560,-6031,-6031
chr1:159171486-159171694	chr1	+	159171485	159171687	True	NM_002036,NR_037870,NM_001122951	chr1,chr1,chr1	+,-,+	DARC,LOC100131825,DARC	2115,575,3361
chr1:202674595-202674867	chr1	+	202674653	202674855	True	NR_002929,NM_177402	chr1,chr1	+,-	LOC148709,SYT2	156026,4752
chr1:87794703-87794954	chr1	+	87794849	87794917	True	NM_006769,NM_203341	chr1,chr1	+,-	LMO4,SEP15	-749,-414742
chr1:236767975-236768183	chr1	+	236767979	236768207	True	NM_018072,NM_201544	chr1,chr1	-,+	HEATR1,LGALS8	-138,-81003
chr22:30754285-30754795	chr22	+	30754284	30754794	True	NM_001005409,NM_005877,NM_001017437	chr22,chr22,chr22	-,-,+	SF3A1,SF3A1,CCDC157	-1371,-1371,-1709
chr17:61518072-61518352	chr17	+	61518113	61518391	True	NM_001017917,NM_001017916,NM_000789,NM_001915	chr17,chr17,chr17,chr17	-,-,+,-	CYB561,CYB561,ACE,CYB561	-4,5204,36030,5381
chr16:90075181-90075390	chr16	+	90075197	90075297	True	NM_024043,NR_023348	chr16,chr16	-,+	DBNDD1,GAS8	1282,13710
chr3:97691865-97692637	chr3	+	97691940	97692676	True	NM_032778,NM_001042533,NM_153182,NM_054106	chr3,chr3,chr3,chr3	-,-,-,+	MINA,MINA,MINA,OR5AC2	-716,-716,-645,113340
chr7:1198577-1198832	chr7	+	1198629	1198869	True	NM_182491,NM_001098201	chr7,chr7	-,+	ZFAND2A,GPER	1036,-70957
chr11:9479496-9479861	chr11	+	9479630	9479915	True	NM_003442,NR_036539	chr11,chr11	+,-	ZNF143,LOC644656	2596,2386
chr6:97345510-97345723	chr6	+	97345520	97345734	True	NM_014165,NM_052904	chr6,chr6	-,+	NDUFAF4,KLHL32	83,26761
chr12:109488021-109488242	chr12	+	109488198	109488287	True	NM_032663,NM_018711	chr12,chr12	+,-	USP30,SVOP	2092,-29353
chr11:65835636-65836094	chr11	+	65835682	65836074	True	NM_033036,NM_018026	chr11,chr11	-,+	GAL3ST3,PACS1	-19031,1749
chr5:150659869-150660785	chr5	+	150660033	150660767	True	NM_001167607,NM_001145017	chr5,chr5	+,-	GM2A,SLC36A3	-27479,22617
chr1:153321905-153322322	chr1	+	153321927	153322327	True	NM_020393,NM_002965	chr1,chr1	-,+	PGLYRP4,S100A9	-905,8002
chr1:209600924-209601667	chr1	+	209600983	209601582	True	NR_029622,NM_001104548,NR_036213	chr1,chr1,chr1	+,+,-	MIR205,LOC642587,MIR4260	3895,585,195325
chr5:138724172-138724718	chr5	+	138724223	138724557	True	NM_001033112,NM_016459,NM_005847,NM_152685,NM_001161546	chr5,chr5,chr5,chr5,chr5	+,-,-,-,-	PAIP2,MZB1,SLC23A1,SLC23A1,LOC389333	-46141,1098,-5184,-5184,6378
chr5:10761744-10762147	chr5	+	10762038	10762131	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-197654,-651
chr2:96900588-96901321	chr2	+	96900593	96901115	True	NM_020151,NM_001037228	chr2,chr2	-,+	STARD7,LOC285033	-26020,4861
chr5:694882-695229	chr5	+	694933	695091	True	NM_018140,NM_007030	chr5,chr5	+,-	CEP72,TPPP	-82579,-1423
chr5:694882-695229	chr5	+	786265	786423	False	NM_001166260,NM_024786	chr5,chr5	+,-	TRIP13,ZDHHC11	106545,64728
chr8:38855893-38856571	chr8	+	38855971	38856621	True	NM_031940,NM_003816,NM_078473,NR_027638,NR_027639,NM_001024380,NM_001024381,NR_027878	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,+,-,+,+,-,-,+	TM2D2,ADAM9,TM2D2,ADAM9,ADAM9,TM2D2,TM2D2,ADAM9	-1930,-1517,-1930,-1517,-1517,-1930,-1930,-1517
chr8:97278058-97279442	chr8	+	97278474	97279458	True	NM_014754,NM_015942	chr8,chr8	+,-	PTDSS1,MTERFD1	-4366,-4678
chr4:37468642-37469723	chr4	+	37469083	37469759	True	NM_001104629,NM_001085399	chr4,chr4	+,-	C4orf19,RELL1	-13589,218290
chr16:58165889-58166318	chr16	+	58165928	58166154	True	NM_013242,NM_002428	chr16,chr16	-,+	C16orf80,MMP15	-2632,-106711
chr2:223303662-223305151	chr2	+	223304347	223305002	True	NM_013942,NM_152386	chr2,chr2	-,+	PAX3,SGPP2	-140632,-15090
chr18:33708336-33708897	chr18	+	33708383	33708849	True	NM_012319,NM_018255,NM_001099406	chr18,chr18,chr18	-,+,-	SLC39A6,ELP2,SLC39A6	563,1037,563
chr5:39411348-39413308	chr5	+	39411622	39413319	True	NM_001343,NM_003999	chr5,chr5	-,+	DAB2,OSMR	12066,-565572
chr16:474689-474947	chr16	+	474784	474992	True	NM_014700,NM_021259	chr16,chr16	+,-	RAB11FIP3,TMEM8A	675,-42834
chrX:40796796-40797207	chrX	+	40796878	40796955	True	NR_027761,NM_001039590	chrX,chrX	-,+	LOC100132831,USP9X	-104429,147932
chr3:186748312-186749314	chr3	+	186748567	186749218	True	NM_003032,NM_052969	chr3,chr3	+,-	ST6GAL1,RPL39L	-8954,108096
chr2:20787683-20788664	chr2	+	20787698	20788567	True	NM_022460,NM_182828	chr2,chr2	-,+	HS1BP3,GDF7	62347,77856
chr13:76210681-76211129	chr13	+	76210946	76211074	True	NM_005358,NM_203497	chr13,chr13	+,-	LMO7,COMMD6	-16427,-98955
chr10:102894688-102894910	chr10	+	102894725	102894931	True	NM_005521,NM_001195517,NM_001085398	chr10,chr10,chr10	+,+,-	TLX1,TLX1,TLX1NB	-3717,-3717,-3822
chr19:13211513-13212944	chr19	+	13211518	13212590	True	NM_005583,NM_052876	chr19,chr19	-,+	LYL1,NACC1	1434,16518
chr2:107106418-107107576	chr2	+	107106721	107107599	True	NM_001144013,NR_003506	chr2,chr2	-,+	RGPD3,PLGLA	-21920,-104009
chr2:107106418-107107576	chr2	-	87085269	87086147	False	NR_037931,NM_172101,NM_172102,NM_001178100,NM_172213,NM_004931	chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-	LOC100286979,CD8B,CD8B,CD8B,CD8B,CD8B	2800,2956,2956,2956,2956,2956
chr8:107774877-107775407	chr8	+	107775067	107775433	True	NM_001198535,NM_139166	chr8,chr8	+,-	OXR1,ABRA	-36787,7089
chr11:93475540-93475895	chr11	+	93475823	93475900	True	NM_024116,NR_031639,NR_002973,NM_014039,NR_002959,NR_003033	chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,+,-,-	TAF1D,MIR1304,SNORA40,C11orf54,SNORA18,SNORD5	-1120,-8893,-7421,-1085,-9060,-9357
chr9:131272666-131273405	chr9	+	131273127	131273199	True	NM_001003722,NM_001499,NR_029837	chr9,chr9,chr9	+,+,-	GLE1,GLE1,MIR219-2	-6209,-6209,-118134
chr20:21105641-21106030	chr20	+	21105748	21106078	True	NM_033176,NM_001163023,NM_001163022,NM_018474	chr20,chr20,chr20,chr20	-,+,+,+	NKX2-4,PLK1S1,PLK1S1,PLK1S1	272019,545,545,545
chr4:186392218-186392545	chr4	+	186392221	186392589	True	NM_152775,NM_001114357,NM_001145411	chr4,chr4,chr4	-,+,-	CCDC110,C4orf47,CCDC110	374,-41727,374
chr1:108778370-108779003	chr1	+	108778414	108778833	True	NM_001143987,NM_001143989	chr1,chr1	+,-	NBPF6,NBPF4	214070,7927
chr1:108778370-108779003	chr1	-	109000755	109001174	False	NM_001102592,NM_001143987,NM_001143988	chr1,chr1,chr1	-,+,+	HENMT1,NBPF6,NBPF6	202621,-7909,-7909
chr16:46858869-46860011	chr16	+	46858869	46860021	True	NM_133443,NM_001001436	chr16,chr16	+,-	GPT2,C16orf87	58286,5111
chr1:46972792-46973654	chr1	+	46972942	46973656	True	NM_147192,NM_001097611,NM_172225	chr1,chr1,chr1	+,-,+	DMBX1,KNCN,DMBX1	-332,43281,-332
chr19:53898640-53898986	chr19	+	53898640	53898984	True	NM_001040185,NM_033341	chr19,chr19	+,-	ZNF765,BIRC8	-296,-103765
chr22:25759599-25760506	chr22	+	25759619	25760325	True	NR_029395,NM_182492	chr22,chr22	+,-	IGLL3P,LRP5L	-45446,-1095
chr5:145718925-145719392	chr5	+	145718955	145719247	True	NM_020117,NM_002700	chr5,chr5	-,+	LARS,POU4F3	-156661,-419
chr16:20429551-20430563	chr16	+	20429570	20430410	True	NM_174924,NM_017888	chr16,chr16	-,+	PDILT,ACSM5	-13537,-8765
chr14:60714270-60714874	chr14	+	60714529	60714873	True	NM_177951,NM_177952,NM_016029,NM_021003	chr14,chr14,chr14,chr14	+,+,-,+	PPM1A,PPM1A,DHRS7,PPM1A	1092,-2117,-82318,1092
chr6:21595816-21596051	chr6	+	21595935	21596099	True	NM_003107,NR_034143	chr6,chr6	+,-	SOX4,LOC729177	-2014,551373
chr7:139877372-139877585	chr7	+	139877376	139877630	True	NM_030647,NR_024451	chr7,chr7	-,+	JHDM1D,LOC100134229	-635,-366
chr1:33003821-33004793	chr1	+	33003822	33004742	True	NM_178547,NM_001040441	chr1,chr1	-,+	ZBTB8OS,ZBTB8A	111493,29
chr14:105046245-105046660	chr14	+	105046366	105046676	True	NM_207379,NM_001008404	chr14,chr14	-,+	TMEM179,C14orf180	24471,-361
chr2:218613995-218615427	chr2	+	218614068	218614862	True	NR_034176,NR_026597	chr2,chr2	+,-	RUFY4,DIRC3	284794,6504
chr8:95652860-95653141	chr8	+	95652956	95653174	True	NM_017697,NR_034034,NM_001122827,NM_001122825,NM_001034915,NM_001122826	chr8,chr8,chr8,chr8,chr8,chr8	+,-,+,+,+,+	ESRP1,LOC100288748,ESRP1,ESRP1,ESRP1,ESRP1	189,-1261,189,189,189,189
chr4:2243639-2243995	chr4	+	2243755	2243965	True	NM_001193282,NM_024511	chr4,chr4	+,-	LOC402160,HAUS3	176735,19
chr12:52680763-52681797	chr12	+	52681124	52681844	True	NM_002284,NM_002281	chr12,chr12	+,-	KRT86,KRT81	13804,3505
chr19:15786035-15786577	chr19	+	15786065	15786438	True	NM_023944,NR_033864	chr19,chr19	+,-	CYP4F12,CYP4F24P	-2230,104411
chr7:80274629-80276067	chr7	+	80274628	80276056	True	NM_001127443,NM_000072,NM_001001548,NM_001102386,NM_001127444	chr7,chr7,chr7,chr7,chr7	+,+,+,-,+	CD36,CD36,CD36,GNAT3,CD36	-15,-6847,-6847,-133386,-88
chr14:55597436-55599376	chr14	+	55597683	55598865	True	NM_002306,NR_003225,NM_001146015,NM_001177388	chr14,chr14,chr14,chr14	+,+,-,+	LGALS3,LGALS3,DLGAP5,LGALS3	-1800,4835,59581,-1800
chr1:67895608-67895858	chr4	+	79102886	79103020	False	NM_025074,NM_144571	chr4,chr4	+,-	FRAS1,CNOT6L	-124213,-362342
chr1:67895608-67895858	chr1	+	67895665	67895829	True	NM_001018068,NM_001018069,NM_001559,NM_015640,NM_001018067	chr1,chr1,chr1,chr1,chr1	-,-,+,-,-	SERBP1,SERBP1,IL12RB2,SERBP1,SERBP1	344,344,-122669,344,344
chr18:55396434-55396873	chr18	+	55396441	55396771	True	NM_005603,NM_004852	chr18,chr18	-,+	ATP8B1,ONECUT2	73606,-293575
chr13:46623209-46624283	chr13	+	46623319	46624183	True	NM_015070,NM_152719	chr13,chr13	-,+	ZC3H13,SPERT	2771,-346931
chr4:6910635-6911044	chr4	+	6910656	6910968	True	NM_020773,NM_153376,NM_001113361	chr4,chr4,chr4	+,-,+	TBC1D14,CCDC96,TBC1D14	526,133810,202
chr1:28444557-28445951	chr1	+	28445007	28445809	True	NR_027268,NM_016311	chr1,chr1	-,+	LOC653566,ATPIF1	-21938,116792
chr1:248222637-248224636	chr1	+	248222864	248224395	True	NM_001004695,NM_001004687	chr1,chr1	-,+	OR2T33,OR2L3	212778,27
chr2:30450807-30451665	chr2	+	30450842	30451613	True	NM_004304,NM_030915	chr2,chr2	-,+	ALK,LBH	-306365,2783
chr19:7991357-7991738	chr19	+	7991419	7991731	True	NM_206833,NM_003083,NR_030717	chr19,chr19,chr19	-,+,+	CTXN1,SNAPC2,SNAPC2	-368,-6276,-5603
chr16:57672836-57673120	chr16	+	57672998	57673118	True	NM_001145774,NM_033212	chr16,chr16	+,-	GPR56,CCDC102A	88,-102521
chr1:11020847-11021296	chr1	+	11020846	11021234	True	NM_007375,NM_001170754	chr1,chr1	+,-	TARDBP,C1orf127	51444,20910
chr11:6945759-6947519	chr11	+	6945825	6947568	True	NM_003700,NM_013250,NM_001004684	chr11,chr11,chr11	-,+,+	OR2D2,ZNF215,OR2D3	-32094,85,-3651
chr8:67936800-67937959	chr8	+	67937638	67937967	True	NM_024790,NM_001013626	chr8,chr8	+,-	CSPP1,LRRC67	38635,2870
chr4:126238307-126238616	chr4	+	126238392	126238652	True	NM_024582,NM_001167882	chr4,chr4	+,-	FAT4,ANKRD50	-876,-604505
chr18:58038890-58040211	chr18	+	58039055	58040231	True	NM_005912,NM_021127	chr18,chr18	-,+	MC4R,PMAIP1	84,-471914
chr7:140305556-140305797	chr7	+	140305662	140305836	True	NM_015689,NM_052853	chr7,chr7	-,+	DENND2A,ADCK2	-3320,67116
chr11:1890476-1890765	chr11	+	1890580	1890650	True	NR_036185,NM_001013254,NM_001013255,NM_001013253	chr11,chr11,chr11,chr11	-,+,+,+	MIR4298,LSP1,LSP1,LSP1	-9814,1448,1503,-731
chr3:9746764-9747126	chr3	+	9746809	9747174	True	NM_003656,NM_153635	chr3,chr3	-,+	CAMK1,CPNE9	64544,-1350
chr1:22777203-22777832	chr1	+	22777225	22777862	True	NM_014870,NM_030761,NM_001083621	chr1,chr1,chr1	+,-,+	ZBTB40,WNT4,ZBTB40	481,-307706,481
chr8:23018600-23019124	chr8	+	23018808	23019014	True	NM_003840,NM_003841	chr8,chr8	-,+	TNFRSF10D,TNFRSF10C	2576,-58532
chr11:18416594-18416839	chr11	+	18416602	18416854	True	NR_028500,NM_001165416,NM_001135239,NM_001165415,NM_005566,NM_181508,NM_001165414	chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,-,+	LDHA,LDHA,LDHA,LDHA,LDHA,HPS5,LDHA	-717,-717,-717,-717,-717,-72881,958
chr10:43950615-43950883	chr10	+	43950783	43950925	True	NR_026693,NM_001098204	chr10,chr10	+,-	ZNF487P,HNRNPF	-18267,-46087
chr1:45205805-45207519	chr1	+	45206015	45206775	True	NM_006845,NM_153274	chr1,chr1	+,-	KIF2C,BEST4	-576,46701
chr22:50308875-50309627	chr22	+	50309256	50309582	True	NM_024324,NM_024105,NM_001135101	chr22,chr22,chr22	+,-,+	CRELD2,ALG12,CRELD2	2700,2574,2700
chr6:56915884-56916586	chr6	+	56916150	56916463	True	NM_020931,NM_183227	chr6,chr6	+,-	KIAA1586,RAB23	-4831,169845
chr3:157156306-157157630	chr3	+	157156353	157157544	True	NM_002852,NM_001167917	chr3,chr3	+,-	PTX3,VEPH1	-1824,55806
chr8:11348803-11349627	chr8	+	11349031	11349575	True	NM_001715,NM_053279	chr8,chr8	+,-	BLK,FAM167A	1945,-24755
chr2:19557344-19557838	chr2	+	19557365	19557745	True	NM_145260,NR_033875	chr2,chr2	-,+	OSR1,FLJ12334	677,510869
chr8:145118033-145118244	chr8	+	145118042	145118236	True	NM_019037,NM_017570	chr8,chr8	+,-	EXOSC4,OPLAH	15285,-2458
chr14:95632088-95633795	chr14	+	95632127	95633792	True	NR_015415,NM_177438	chr14,chr14	+,-	FLJ45244,DICER1	-8153,-8368
chr1:236772124-236772615	chr1	+	236772310	236772648	True	NM_018072,NM_001103	chr1,chr1	-,+	HEATR1,ACTN2	-4469,77121
chrX:64770933-64771314	chrX	+	64771066	64771306	True	NM_001010888,NR_033742	chrX,chrX	+,-	ZC3H12B,FKSG43	-62502,1045
chr17:8191155-8191620	chr17	+	8191179	8191467	True	NM_201520,NM_001177802,NM_016492,NM_001177801	chr17,chr17,chr17,chr17	-,+,+,+	SLC25A35,RANGRF,RANGRF,RANGRF	6753,501,501,501
chr13:103052792-103053190	chr13	+	103052949	103053233	True	NR_036487,NR_036486,NM_175929	chr13,chr13,chr13	+,-,-	LOC283481,LOC283480,FGF14	-6080,-6080,941
chr12:132381713-132381974	chr12	+	132381764	132381923	True	NM_175066,NM_003565	chr12,chr12	-,+	DDX51,ULK1	247007,-2536
chr19:56155446-56155830	chr19	+	56155509	56155733	True	NM_007279,NM_001012478,NM_016202,NM_013301,NM_001163423,NM_203374,NM_207115,NM_016535	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,-,+,+	U2AF2,U2AF2,ZNF580,CCDC106,ZNF580,ZNF784,ZNF580,ZNF581	9682,9682,-2142,3220,-2097,-19568,-3168,-574
chr4:140215390-140215610	chr4	+	140215463	140215573	True	NM_001184987,NM_001184986,NM_001184990,NM_001184991,NM_001184989,NM_001184988,NM_057175,NM_002494	chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4	-,-,-,-,-,-,+,-	NDUFC1,NDUFC1,NDUFC1,NDUFC1,NDUFC1,NDUFC1,NAA15,NDUFC1	8188,6847,8188,6847,8188,8188,7102,6871
chr6:84418063-84418265	chr6	+	84418170	84418248	True	NR_026669,NM_014841,NM_001009994	chr6,chr6,chr6	-,-,+	SNAP91,SNAP91,RIPPLY2	929,929,144736
chr17:18963918-18964913	chr17	+	18963935	18964949	True	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	65832,-13599
chr17:18963918-18964913	chr17	-	19093833	19094551	False	NM_006613,NM_001102664	chr17,chr17	-,+	GRAP,EPN2	-143497,46138
chr17:18963918-18964913	chr17	+	19090335	19091053	False	NM_006613,NM_001102664	chr17,chr17	-,+	GRAP,EPN2	-139999,49636
chr17:18963918-18964913	chr17	-	19016224	19016942	False	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	13839,-65888
chr17:18963918-18964913	chr17	-	18967724	18968456	False	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	62325,-17388
chr1:100731746-100731996	chr1	+	100731753	100731879	True	NM_001918,NM_003729,NM_001130841	chr1,chr1,chr1	-,+,+	DBT,RTCD1,RTCD1	-16344,-90,-90
chr7:44181349-44182102	chr7	+	44181471	44181983	True	NM_021223,NM_001129	chr7,chr7	-,+	MYL7,AEBP1	-555,-37562
chr8:41657151-41657389	chr8	+	41657189	41657427	True	NM_000037,NM_178819,NM_020475,NM_020476,NM_020477	chr8,chr8,chr8,chr8,chr8	-,+,-,-,-	ANK1,AGPAT6,ANK1,ANK1,ANK1	-2049,-221533,-2049,-2049,-2049
chr3:49169805-49170060	chr3	+	49169955	49170023	True	NM_173546,NM_002292	chr3,chr3	+,-	KLHDC8B,LAMB2	38994,626
chr19:15087489-15088024	chr19	+	15087569	15088040	True	NM_173482,NM_005071	chr19,chr19	+,-	CCDC105,SLC1A6	33498,-3839
chr8:144372353-144372649	chr8	+	144372463	144372633	True	NM_030895,NM_052963	chr8,chr8	+,-	ZNF696,TOP1MT	925,44467
chr11:45864878-45865489	chr11	+	45864929	45865402	True	NM_021117,NM_001080446,NM_001127457	chr11,chr11,chr11	+,-,+	CRY2,C11orf94,CRY2	3554,63488,3266
chr1:159140493-159141207	chr1	+	159140525	159140955	True	NM_001127173,NM_021189,NR_037870	chr1,chr1,chr1	+,+,-	CADM3,CADM3,LOC100131825	458,421,31307
chr2:131486769-131486988	chr2	+	131486844	131487036	True	NM_207364,NM_001079530	chr2,chr2	+,-	GPR148,CFC1B	-252,-129593
chr6:35747208-35747448	chr6	+	35747207	35747469	True	NM_001010886,NM_207409,NM_001832	chr6,chr6,chr6	+,+,-	C6orf127,C6orf126,CLPS	1361,-2866,17683
chr10:93250594-93252113	chr10	+	93250942	93252133	True	NR_024467,NM_182765	chr10,chr10	-,+	LOC100188947,HECTD2	119141,-80910
chr11:2397301-2397560	chr11	+	2397305	2397561	True	NM_004356,NM_014555	chr11,chr11	+,-	CD81,TRPM5	985,46764
chrX:74740875-74742805	chrX	+	74741062	74742783	True	NM_001146257,NM_001146256,NM_144969,NR_030774	chrX,chrX,chrX,chrX	-,-,-,+	ZDHHC15,ZDHHC15,ZDHHC15,UPRT	604,604,604,-247219
chr1:109230275-109231965	chr1	+	109230361	109231753	True	NR_037185,NM_018061,NM_144584	chr1,chr1,chr1	+,+,-	PRPF38B,PRPF38B,HENMT1	3181,3178,-26213
chr8:67090585-67091447	chr8	+	67090711	67091382	True	NM_000756,NM_184087	chr8,chr8	-,+	CRH,TRIM55	-49,-51484
chr12:49998939-49999838	chr12	+	49998963	49999433	True	NM_012272,NR_027450,NM_032130	chr12,chr12,chr12	+,-,-	PRPF40B,FAM186B,FAM186B	17969,27,50
chr3:30677726-30678999	chr3	+	30677882	30679023	True	NM_207359,NM_003242	chr3,chr3	-,+	GADL1,TGFBR2	257180,-29939
chr1:13910815-13912114	chr1	+	13911208	13912159	True	NM_006474,NM_001010847,NM_001006625,NM_001006624,NM_198389	chr1,chr1,chr1,chr1,chr1	+,-,+,+,+	PDPN,LRRC38,PDPN,PDPN,PDPN	-1007,-70966,-35,-35,-1007
chr2:122044085-122044356	chr2	+	122044202	122044314	True	NR_023343,NM_014553	chr2,chr2	+,-	RNU4ATAC,TFCP2L1	244141,-1424
chr19:2696997-2697672	chr19	+	2697243	2697669	True	NM_003249,NM_052847	chr19,chr19	+,-	THOP1,GNG7	87836,5127
chr20:42147368-42148551	chr20	+	42148318	42148603	True	NM_001008901,NM_015478	chr20,chr20	-,+	GTSF1L,L3MBTL1	207097,-5293
chr15:101155876-101156282	chr15	+	101155876	101156315	True	NM_198243,NM_001040616	chr15,chr15	+,-	ASB7,LINS	-13180,-13431
chr1:235291756-235291998	chr1	+	235291758	235292042	True	NM_001037277,NR_002956,NM_014765	chr1,chr1,chr1	+,-,-	GGPS1,SNORA14B,TOMM20	199710,-506,264
chr3:63851493-63852066	chr3	+	63851729	63852087	True	NM_000333,NM_025075	chr3,chr3	+,-	ATXN7,THOC7	-1557,-2132
chr11:65191225-65191458	chr11	+	65191225	65191469	True	NR_028272,NM_182556	chr11,chr11	+,-	NEAT1,SLC25A45	-1007,-41083
chr19:7661855-7663220	chr19	+	7662270	7663153	True	NM_020196,NM_020902,NM_001080429	chr19,chr19,chr19	-,+,+	XAB2,KIAA1543,KIAA1543	31337,-1533,-1533
chr10:121416058-121417087	chr10	+	121416135	121417131	True	NM_004281,NM_003252	chr10,chr10	+,-	BAG3,TIAL1	-5311,-59594
chr21:33678649-33679742	chr21	+	33678677	33679479	True	NM_206898,NM_018944	chr21,chr21	+,-	MRAP,MIS18A	-14605,-27301
chr11:111237877-111238656	chr11	+	111237997	111238618	True	NM_001136105,NM_006235	chr11,chr11	+,-	C11orf93,POU2AF1	-68073,11589
chrX:52512070-52512741	chrX	+	52512138	52512744	True	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,+,+,+,+,+,+,+,+,+,+	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	-275,-219,-219,-428,-219,-219,-219,-275,-428,-275,-428,-428,-428,-275,-275
chrX:52512070-52512741	chrX	-	52532319	52532925	False	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,-,-,-,-,-,-,-,-,-,-	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	275,219,219,428,219,219,219,275,428,275,428,428,428,275,275
chrX:52512070-52512741	chrX	-	52545213	52545819	False	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,-,-,-,-,-,-,-,-,-,-	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	275,219,219,428,219,219,219,275,428,275,428,428,428,275,275
chrX:52512070-52512741	chrX	+	52239187	52239793	False	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,+,+,+,+,+,+,+,+,+,+	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	-275,-219,-219,-428,-219,-219,-219,-275,-428,-275,-428,-428,-428,-275,-275
chrX:52512070-52512741	chrX	-	52259379	52259985	False	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,-,-,-,-,-,-,-,-,-,-	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	275,219,219,428,219,219,219,275,428,275,428,428,428,275,275
chr16:46724266-46724929	chr16	+	46724277	46724897	True	NM_014321,NR_037620,NM_018206	chr16,chr16,chr16	+,+,-	ORC6,ORC6,VPS35	-770,-770,-1133
chr1:13333341-13333697	chr1	+	13333354	13333573	True	NM_001013407,NM_001100631,NM_001013692	chr1,chr1,chr1	+,-,-	PRAMEF5,PRAMEF22,PRAMEF3	26245,-1683,-1662
chr1:13333341-13333697	chr1	-	13033640	13033859	False	NM_001100631,NM_001010889	chr1,chr1	+,-	PRAMEF22,PRAMEF6	1683,-26234
chr1:13333341-13333697	chr1	-	13138544	13138762	False	NM_001100631,NM_001013407	chr1,chr1	+,-	PRAMEF22,PRAMEF5	-103055,-20793
chrY:20489260-20489539	chrY	+	20489283	20489469	True	NR_028083,NR_002161,NR_002160	chrY,chrY,chrY	-,+,+	FAM41AY1,NCRNA00230A,NCRNA00230B	77513,-916,-895
chrY:20489260-20489539	chrY	-	19690302	19690488	False	NR_028084,NR_002161,NR_002160	chrY,chrY,chrY	+,-,-	FAM41AY2,NCRNA00230A,NCRNA00230B	-77515,916,895
chr1:52614525-52615456	chr1	+	52614858	52615507	True	NM_015913,NM_007324,NM_007323,NM_004799	chr1,chr1,chr1,chr1	-,+,+,+	TXNDC12,ZFYVE9,ZFYVE9,ZFYVE9	-93811,-6869,-6869,-6869
chr12:69976750-69978178	chr12	+	69976866	69977911	True	NM_001198842,NR_037475,NM_006431,NR_037476	chr12,chr12,chr12,chr12	+,-,+,+	CCT2,MIR3913-1,CCT2,MIR3913-2	1550,745,1296,591
chr5:5057533-5058643	chr5	+	5057619	5058612	True	NR_026994,NR_028351	chr5,chr5	+,-	LOC340094,FLJ33360	-23198,1278843
chr19:46196790-46197146	chr19	+	46196861	46197152	True	NM_177542,NM_001163377,NM_017659,NM_004597	chr19,chr19,chr19,chr19	-,+,+,-	SNRPD2,QPCTL,QPCTL,SNRPD2	-1418,-1173,-1173,-1418
chr2:42992671-42994319	chr2	+	42992928	42994141	True	NM_148962,NM_020744	chr2,chr2	-,+	OXER1,MTA3	-1527,-197308
chr15:43810447-43810780	chr15	+	43810769	43810829	True	NM_002373,NM_005657	chr15,chr15	+,-	MAP1A,TP53BP1	-1014,-8062
chr5:178974847-178975549	chr5	+	178974920	178975550	True	NM_005520,NM_025158	chr5,chr5	-,+	HNRNPH1,RUFY1	75223,2020
chr20:43346890-43347344	chr20	+	43346987	43347237	True	NR_034104,NM_003881	chr20,chr20	-,+	LOC79015,WISP2	-46607,-3160
chr7:5604156-5604459	chr7	+	5604258	5604338	True	NM_001101,NM_003088	chr7,chr7	-,+	ACTB,FSCN1	-34026,28115
chr3:45076241-45077249	chr3	+	45076543	45077205	True	NM_003278,NM_016598	chr3,chr3	+,-	CLEC3B,ZDHHC3	-8835,-58869
chr3:179179207-179180346	chr3	+	179179327	179180242	True	NM_004301,NM_021629	chr3,chr3	+,-	ACTL6A,GNB4	100465,-9956
chr11:2018250-2018633	chr11	+	2018253	2018673	True	NR_002196,NR_024471,NR_030533,NM_021134	chr11,chr11,chr11,chr11	-,-,-,+	H19,LOC100133545,MIR675,MRPL23	442,-7103,-192,-49802
chr20:57227121-57227401	chr20	+	57227120	57227394	True	NR_037945,NR_037941,NR_037943,NR_037942,NM_153360,NM_001134773,NM_001134772,NM_003763,NM_001204868,NM_001001433	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,+,+,+,-,+,+,+,+,+	STX16-NPEPL1,STX16,STX16,STX16,APCDD1L,STX16,STX16,STX16,STX16,STX16	-862,-862,-862,-862,-137171,-862,-862,-862,-862,-862
chr16:30103000-30103269	chr16	+	30103026	30103238	True	NM_002720,NM_004608,NM_001145524,NM_031477	chr16,chr16,chr16,chr16	+,-,-,-	PPP4C,TBX6,YPEL3,YPEL3	-15693,17,4349,4333
chr8:11561767-11562129	chr8	+	11561910	11562088	True	NM_002052,NM_001908	chr8,chr8	+,-	GATA4,CTSB	-244,163608
chr17:65990398-65990815	chr17	+	65990443	65990859	True	NM_002266,NM_181656,NM_181655	chr17,chr17,chr17	+,-,-	KPNA2,C17orf58,C17orf58	40988,-678,-678
chr8:31497146-31497451	chr8	+	31497273	31497499	True	NM_013962,NM_001015508	chr8,chr8	+,-	NRG1,PURG	-56,-606042
chr4:72089173-72089657	chr4	+	72089332	72089688	True	NM_002092,NM_001134742	chr4,chr4	-,+	GRSF1,SLC4A4	-383705,-36380
chr17:39648131-39648766	chr17	+	39648317	39648713	True	NM_005801,NM_003771	chr17,chr17	+,-	EIF1,KRT36	196413,-2201
chr8:145558647-145558856	chr8	+	145558734	145558854	True	NM_024531,NM_012079,NM_031309	chr8,chr8,chr8	+,-,-	GPR172A,DGAT1,SCRT1	23370,-8167,1139
chr22:51064988-51065352	chr22	+	51065005	51065363	True	NM_000487,NM_016431,NM_001085428,NM_001085426,NM_001085427,NM_001085425	chr22,chr22,chr22,chr22,chr22,chr22	-,+,-,-,-,-	ARSA,MAPK8IP2,ARSA,ARSA,ARSA,ARSA	1288,-23494,1288,1288,1288,1288
chr21:19174518-19176367	chr21	+	19174998	19176406	True	NM_001100420,NM_001204175	chr21,chr21	-,+	C21orf91,CHODL	15347,113250
chrX:100487757-100488118	chrX	+	100487767	100488137	True	NM_001939,NM_001168474	chrX,chrX	+,-	DRP2,TAF7L	-12885,58238
chr10:121585016-121585304	chr10	+	121585036	121585338	True	NM_024834,NR_003252	chr10,chr10	-,+	MCMBP,INPP5F	47112,-6301
chr4:69211921-69212851	chr4_ctg9_hap1	+	42046	42822	False	NM_014058,NM_133370,NM_001031732	chr4_ctg9_hap1,chr4_ctg9_hap1,chr4_ctg9_hap1	+,-,-	TMPRSS11E,YTHDC1,YTHDC1	100266,2974,2974
chr4:69211921-69212851	chr4	+	69212124	69212900	True	NM_014058,NM_133370,NM_001031732	chr4,chr4,chr4	+,-,-	TMPRSS11E,YTHDC1,YTHDC1	100266,2974,2974
chr2:949937-951619	chr2	+	949982	951530	True	NM_018968,NR_033880	chr2,chr2	+,-	SNTG2,LOC339822	-3479,-85870
chr10:97197174-97197680	chr10	+	97197179	97197613	True	NM_006434,NM_207321,NM_001034956,NM_001034957,NM_001034954,NM_001034955	chr10,chr10,chr10,chr10,chr10,chr10	-,+,-,-,-,-	SORBS1,C10orf129,SORBS1,SORBS1,SORBS1,SORBS1	3374,-243273,3374,3374,3374,3374
chr15:65134876-65135284	chr15	+	65134926	65135100	True	NM_001195059,NM_025049,NM_025201	chr15,chr15,chr15	+,-,+	PLEKHO2,PIF1,PLEKHO2	-895,-17088,-895
chr17:58097568-58097828	chr17	+	58097757	58097823	True	NM_003161,NR_002924	chr17,chr17	+,-	RPS6KB1,DHX40P1	-127367,-1421
chr17:58097568-58097828	chr17	-	58203444	58203510	False	NM_000717,NR_027408	chr17,chr17	+,-	CA4,LOC653653	23791,-23164
chr10:24537454-24538824	chr10	+	24537626	24538843	True	NM_020824,NR_023388	chr10,chr10	-,+	ARHGAP21,PRINS	473804,-1630
chr10:38300975-38301450	chr10	+	38300990	38301358	True	NM_006974,NM_145011,NM_006954	chr10,chr10,chr10	+,-,+	ZNF33A,ZNF25,ZNF33A	-1471,-35537,-1471
chr19:12004196-12004472	chr19	+	12004281	12004471	True	NM_021915,NM_001080411	chr19,chr19	+,-	ZNF69,ZNF433	-5665,142104
chr17:37382159-37382389	chr17	+	37382169	37382401	True	NM_198993,NM_000981	chr17,chr17	-,+	STAC2,RPL19	-129,-25684
chrX:118532450-118533177	chrX	+	118532523	118533141	True	NM_145305,NR_028443	chrX,chrX	+,-	SLC25A43,LOC100303728	116,69992
chr3:183736646-183737658	chr3	+	183736868	183737479	True	NM_182537,NM_001023587,NM_005688	chr3,chr3,chr3	+,-,-	HTR3D,ABCC5,ABCC5	11852,-1141,-1141
chr1:28916442-28917323	chr1	+	28916636	28917158	True	NM_152304,NR_024127,NR_003035,NR_002976,NM_001193532	chr1,chr1,chr1,chr1,chr1	+,-,-,-,+	RAB42,SNHG12,SNORA16A,SNORA44,RAB42	1553,-8270,-9071,-9612,1848
chr17:16747276-16748750	chr17	+	16747567	16748727	True	NR_026810,NR_029392	chr17,chr17	+,-	FAM106C,KRT16P2	-55561,-11420
chr17:16747276-16748750	chr17	-	18330642	18331308	False	NM_148918,NR_001443	chr17,chr17	-,+	SHMT1,LOC339240	-63786,-5198
chr17:16747276-16748750	chr17	+	20419727	20420393	False	NM_001190790,NR_029393	chr17,chr17	+,-	CDRT15L2,KRT16P3	62643,-11916
chr10:135161338-135161824	chr10	+	135161488	135161664	True	NM_001145201,NM_145202,NM_001098483,NM_198472	chr10,chr10,chr10,chr10	+,+,-,-	PRAP1,PRAP1,C10orf125,C10orf125	-695,-695,9915,9915
chr3:44041012-44041414	chr3	+	44041073	44041461	True	NM_001204834,NR_029700	chr3,chr3	-,+	ANO10,MIR138-1	-377513,114242
chr5:172097500-172097895	chr5	+	172097537	172097869	True	NM_001142651,NM_004417	chr5,chr5	+,-	NEURL1B,DUSP1	-29313,100384
chr7:73622752-73623635	chr7	+	73623085	73623683	True	NM_032463,NM_032464,NM_014146,NM_002914	chr7,chr7,chr7,chr7	+,+,+,-	LAT2,LAT2,LAT2,RFC2	403,403,403,45105
chr5:37376658-37377527	chr5	+	37376822	37377384	True	NM_153485,NM_018034,NM_004298	chr5,chr5,chr5	-,+,-	NUP155,WDR70,NUP155	-5625,2027,-5935
chr5:140552065-140552598	chr5	+	140552087	140552557	True	NM_019120,NM_020957,NM_031947,NM_018940	chr5,chr5,chr5,chr5	+,+,-,+	PCDHB8,PCDHB16,SLC25A2,PCDHB7	4872,8422,131105,63
chr1:145712330-145713675	chr1	+	145712499	145713603	True	NM_001201325,NM_007053	chr1,chr1	+,-	PDZK1,CD160	14062,2012
chr2:112642932-112644590	chr2	+	112643826	112644598	True	NM_022662,NM_006343	chr2,chr2	-,+	ANAPC1,MERTK	-2085,11592
chr11:98931002-98931921	chr11	+	98931341	98931899	True	NM_175566,NM_001202474	chr11,chr11	+,-	CNTN5,PGR	-39532,2067945
chr22:36219916-36221747	chr22	+	36220215	36221754	True	NM_030642,NM_001031695	chr22,chr22	+,-	APOL5,RBFOX2	-106348,14928
chr5:174908415-174909194	chr5	+	174908611	174909169	True	NM_000794,NM_022754	chr5,chr5	-,+	DRD1,SFXN1	-37448,-3148
chr2:115920219-115920526	chr2	+	115920230	115920574	True	NR_036580,NM_001178034,NM_001004360	chr2,chr2,chr2	-,+,+	LOC389023,DPP10,DPP10	-1310,-768,-597
chr8:50836764-50837077	chr8	+	50836880	50837118	True	NM_003068,NM_018967	chr8,chr8	-,+	SNAI2,SNTG1	-1002881,-12342
chr1:53389357-53389725	chr1	+	53389564	53389738	True	NM_001198962,NM_002979,NM_001198961,NM_001193617,NM_001193600,NM_018281,NM_001193599,NM_001007098	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,+,-,+,+,-,+,+	ECHDC2,SCP2,ECHDC2,SCP2,SCP2,ECHDC2,SCP2,SCP2	-2118,3162,-2118,3162,3162,-2118,3162,3162
chr1:154644054-154644629	chr1	+	154644185	154644571	True	NM_000748,NM_001025107	chr1,chr1	+,-	CHRNB2,ADAR	-103979,-43729
chr17:79679777-79680031	chr17	+	79679926	79679998	True	NM_001040025,NM_002949,NM_012140	chr17,chr17,chr17	-,+,+	ARL16,MRPL12,SLC25A10	-28972,-9577,-606
chr6:14777478-14778799	chr6	+	14777676	14778739	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	467787,884601
chrY:3444138-3445798	chrY	+	3444487	3445576	True	NM_003140,NM_139214	chrY,chrY	-,+	SRY,TGIF2LY	-788695,1549
chrY:3444138-3445798	chrX	+	89175120	89175303	False	NM_138960,NM_004538	chrX,chrX	+,-	TGIF2LX,NAP1L3	1636,3753436
chr19:14318817-14319490	chr19	+	14318817	14319475	True	NM_014921,NR_024282,NM_001008701	chr19,chr19,chr19	-,+,-	LPHN1,LOC113230,LPHN1	-1820,-135047,-1820
chr12:7848346-7848738	chr12	+	7848359	7848723	True	NM_199286,NM_020634	chr12,chr12	+,-	DPPA3,GDF3	15365,1
chr9:35615662-35617014	chr9	+	35615860	35617042	True	NM_001782,NM_006285	chr9,chr9	-,+	CD72,TESK1	1432,-10630
chr11:67373920-67374149	chr11	+	67373964	67374140	True	NM_007103,NR_033791,NM_001166102	chr11,chr11,chr11	+,-,+	NDUFV1,DOC2GP,NDUFV1	182,9045,182
chr14:60334920-60336157	chr14	+	60335426	60336190	True	NM_021136,NM_022495	chr14,chr14	-,+	RTN1,C14orf135	1417,222438
chr4:184363573-184364936	chr4	+	184363822	184364972	True	NR_033995,NM_017632	chr4,chr4	-,+	LOC389247,CDKN2AIP	60746,816
chr4:119275469-119276361	chr4	+	119275702	119276378	True	NR_002963,NM_003619	chr4,chr4	+,-	SNORA24,PRSS12	-75415,-1780
chr3:174094806-174095067	chr3	+	174094968	174095034	True	NM_207015,NM_031955	chr3,chr3	+,-	NAALADL2,SPATA16	482076,-1235910
chr9:129885102-129886085	chr9	+	129885261	129885983	True	NM_032293,NM_012098	chr9,chr9	+,-	GARNL3,ANGPTL2	140772,-217
chr6:33682790-33684449	chr6	+	33683303	33684477	True	NM_032340,NM_002224	chr6,chr6	-,+	C6orf125,ITPR3	-3799,-94198
chr11:121161728-121162402	chr11	+	121162190	121162449	True	NR_029671,NM_001024956,NM_006918	chr11,chr11,chr11	-,+,+	MIR125B1,SC5DL,SC5DL	808156,1127,938
chr1:159894888-159895115	chr1	+	159894995	159895073	True	NM_003564,NM_020125	chr1,chr1	-,+	TAGLN2,SLAMF8	261,-98567
chr1:145575280-145575840	chr1	+	145575433	145575711	True	NM_006099,NM_001012758	chr1,chr1	+,-	PIAS3,NUDT17	276,13774
chr3:13918580-13919633	chr3	+	13918613	13919373	True	NM_004625,NR_036481	chr3,chr3	-,+	WNT7A,LOC100132526	2295,55179
chr15:44580021-44580860	chr15	+	44580025	44580583	True	NM_032892,NM_177974,NM_138423	chr15,chr15,chr15	-,+,+	FRMD5,CASC4,CASC4	-92596,325,325
chr7:30635223-30635710	chr7	+	30635226	30635624	True	NM_001202482,NM_002047	chr7,chr7	-,+	CRHR2,GARS	86567,-1097
chr5:153859066-153859438	chr5	+	153859122	153859460	True	NM_004821,NR_024084	chr5,chr5	-,+	HAND1,SAP30L	-1298,-33656
chr15:25475938-25476991	chr15	+	25476038	25476936	True	NR_003353,NR_003358,NR_003352,NR_003497,NR_003351,NR_003344,NR_003345,NR_003346,NR_003347,NM_130838,NR_003354,NR_003303,NR_003348,NR_003349,NR_003350	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,-,+,+,+,+,+	SNORD115-38,SNORD115-43,SNORD115-37,HBII-52-28,SNORD115-36,SNORD115-29,SNORD115-30,SNORD115-31,SNORD115-32,UBE3A,SNORD115-39,SNORD115-11,SNORD115-33,SNORD115-34,SNORD115-35	8048,4295,6196,-8588,4295,4295,-5739,-3833,-1975,173767,9956,4295,-104,597,2457
chr7:121544756-121545677	chr7	+	121544866	121545700	True	NM_002851,NM_005763	chr7,chr7	+,-	PTPRZ1,AASS	-31769,238694
chr3:150923392-150923600	chr3	+	150923394	150923565	True	NM_053002,NM_013308	chr3,chr3	+,-	MED12L,GPR171	-118769,-2406
chr10:88862889-88863710	chr10	+	88863041	88863711	True	NM_019054,NM_005271	chr10,chr10	+,-	FAM35A,GLUD1	-8149,-8265
chr4:128881453-128882689	chr4	+	128881865	128882649	True	NM_001039717,NM_152778	chr4,chr4	+,-	C4orf29,MFSD8	3811,4552
chr17:74531009-74532032	chr17	+	74531105	74532037	True	NM_134268,NM_001077620,NR_033357	chr17,chr17,chr17	-,+,+	CYGB,PRCD,PRCD	1795,4083,-7488
chr3:37443496-37443951	chr3	+	37443534	37443990	True	NM_178339,NM_017724,NM_178342	chr3,chr3,chr3	+,-,+	C3orf35,LRRFIP2,C3orf35	-2617,-225683,-2617
chr9:35562359-35562807	chr9	+	35562390	35562768	True	NM_001099951,NM_001135999,NM_001164310	chr9,chr9,chr9	-,+,-	FAM166B,RUSC2,FAM166B	1178,-23812,1178
chr11:105550803-105552489	chr11	+	105550803	105552317	True	NM_032424,NM_001112812	chr11,chr11	-,+	KIAA1826,GRIA4	340695,-69443
chr1:40046008-40046902	chr1	+	40046318	40046905	True	NM_001135653,NM_003819,NM_001135654,NM_181809	chr1,chr1,chr1,chr1	-,-,-,+	PABPC4,PABPC4,PABPC4,BMP8A	-3797,-3797,-3797,-89051
chr9:14314769-14315007	chr9	+	14314862	14314982	True	NM_005596,NR_003920,NM_001190737	chr9,chr9,chr9	-,+,-	NFIB,LOC389705,NFIB	-817,678342,-817
chr16:2868337-2868700	chr16	+	2868344	2868738	True	NR_026864,NM_144956,NM_006799,NM_144957	chr16,chr16,chr16,chr16	-,+,+,+	PRSS30P,PRSS21,PRSS21,PRSS21	24064,-1231,-1231,-1231
chr15:25462499-25463042	chr15	+	25462673	25463079	True	NR_003315,NR_003358,NR_003495,NR_003496,NR_003497,NR_022010,NR_003344,NR_003345,NR_003351,NR_003314,NM_130838,NR_003342,NR_003343,NR_003303,NR_003346	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,+,-,+,+,+,+	SNORD115-23,SNORD115-43,SNORD115-24,HBII-52-27,HBII-52-28,PAR4,SNORD115-29,SNORD115-30,SNORD115-36,SNORD115-22,UBE3A,SNORD115-25,SNORD115-26,SNORD115-11,SNORD115-31	-5781,5313,-3918,2570,4421,-5885,5313,7270,5313,-7659,187624,-2036,684,5313,9176
chrX:151306058-151306531	chrX	+	151306104	151306476	True	NM_001204811,NM_001011550,NM_021048,NM_001011543	chrX,chrX,chrX,chrX	-,+,-,-	MAGEA10-MAGEA5,MAGEA4,MAGEA10,MAGEA10	599,-219395,599,599
chr19:7893703-7894748	chr19	+	7893865	7894661	True	NM_145245,NM_001190467	chr19,chr19	+,-	EVI5L,FLJ22184	499,44715
chr11:60990365-60992012	chr11	+	60990897	60991776	True	NM_017966,NM_001079808	chr11,chr11	-,+	VPS37C,PGA4	-61981,-1127
chr11:60990365-60992012	chr11	+	60972640	60972698	False	NM_001079807,NM_017966	chr11,chr11	+,-	PGA3,VPS37C	-1715,-43724
chr11:60990365-60992012	chr11	+	61009723	61010602	False	NM_014224,NM_152718	chr11,chr11	+,-	PGA5,VWCE	-1130,52243
chr1:226017630-226019104	chr1	+	226017790	226018949	True	NM_000120,NM_014698	chr1,chr1	+,-	EPHX1,TMEM63A	-4852,51521
chr5:133702902-133703223	chr5	+	133702911	133703055	True	NM_016508,NM_003337,NM_001113575	chr5,chr5,chr5	-,+,-	CDKL3,UBE2B,CDKL3	-146,3814,-146
chr19:52002729-52002937	chr19	+	52002769	52002983	True	NM_053003,NM_033329,NM_001080405	chr19,chr19,chr19	-,-,+	SIGLEC12,SIGLEC12,CEACAM18	2110,714,-22982
chr12:51720753-51721658	chr12	+	51720752	51721239	True	NM_001136269,NM_016293	chr12,chr12	+,-	DAZAP2,BIN2	-88295,-2814
chr3:47558847-47559496	chr3	+	47559070	47559547	True	NM_015466,NM_001031703	chr3,chr3	+,-	PTPN23,C3orf75	-136638,-3871
chr10:75103389-75104193	chr10	+	75103491	75104191	True	NM_173348,NM_145170	chr10,chr10	+,-	FAM149B1,TTC18	-175669,14476
chr9:114656787-114657228	chr9	+	114656955	114657116	True	NM_003358,NM_173521	chr9,chr9	+,-	UGCG,C9orf84	2089,-111176
chr16:31228442-31229227	chr16	+	31228444	31228926	True	NM_001008274,NM_152901	chr16,chr16	+,-	TRIM72,PYDC1	-3153,-49
chr9:98182509-98183893	chr9	+	98182590	98183726	True	NR_029496,NM_001083607	chr9,chr9	+,-	MIR24-1,PTCH1	-334338,85812
chr19:49199623-49199963	chr19	+	49199664	49199942	True	NM_001097638,NM_000511,NM_182574	chr19,chr19,chr19	+,+,-	FUT2,FUT2,MAMSTR	-487,-487,20322
chr14:24507011-24508891	chr14	+	24507197	24508273	True	NM_006177,NM_001082488	chr14,chr14	-,+	NRL,DHRS4L1	45609,-1538
chr3:50373195-50374329	chr3	+	50373624	50374358	True	NM_007275,NM_015896,NM_007022,NM_007182,NM_170713,NM_170712,NM_170714	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,+,-,-,-,-	TUSC2,ZMYND10,CYB561D2,RASSF1,RASSF1,RASSF1,RASSF1	-7956,8848,13938,4059,587,1356,4059
chr2:101765903-101766485	chr2	+	101765932	101766524	True	NM_001102426,NM_017546	chr2,chr2	-,+	TBC1D8,C2orf29	1372,102820
chr22:38602439-38603537	chr22	+	38602675	38602975	True	NM_001161573,NM_001161572,NM_001161574,NM_012323,NM_001199562	chr22,chr22,chr22,chr22,chr22	+,+,+,+,-	MAFF,MAFF,MAFF,MAFF,PLA2G6	-3708,-4796,-4796,-4796,-24839
chr4:9500052-9500641	chr4	+	9500190	9500532	True	NR_031688,NM_001040448	chr4,chr4	-,+	MIR548I2,DEFB131	57455,-53981
chr5:142073015-142074248	chr5	+	142073767	142074183	True	NR_026696,NM_001135608,NM_033136,NM_000800,NM_001144934,NM_001144935,NR_026695	chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,+,-,-,-,-,-	FGF1,ARHGAP26,FGF1,FGF1,FGF1,FGF1,FGF1	3502,76108,-7715,-8114,3502,3502,3502
chr5:176874927-176875182	chr5	+	176874972	176875182	True	NM_001174102,NM_030567,NM_080881,NM_001174101	chr5,chr5,chr5,chr5	+,+,-,+	PRR7,PRR7,DBN1,PRR7	143,-1227,24739,-1227
chr12:133288142-133289133	chr12	+	133288501	133289007	True	NM_001170544,NM_001170543,NM_138575,NM_006231	chr12,chr12,chr12,chr12	+,+,+,-	PGAM5,PGAM5,PGAM5,POLE	-1159,-1159,-1159,-24556
chr12:42637045-42638693	chr12	+	42637154	42638424	True	NM_001190977,NM_005748,NM_001190980,NR_034000,NM_001190979,NM_201438	chr12,chr12,chr12,chr12,chr12,chr12	-,-,-,-,-,+	YAF2,YAF2,YAF2,YAF2,YAF2,PPHLN1	-5065,-5000,-5003,-5003,-5003,81522
chr4:165978062-165980062	chr4	+	165978107	165980000	True	NM_001100389,NM_152620	chr4,chr4	-,+	TMEM192,TRIM60	54074,-25007
chr5:137779116-137780032	chr5	+	137779175	137779931	True	NM_004730,NM_016606	chr5,chr5	-,+	ETF1,REEP2	99051,-4453
chr1:35545634-35546211	chr1	+	35545770	35546258	True	NM_024772,NM_007167	chr1,chr1	+,-	ZMYM1,ZMYM6	-855,-48201
chr11:46357455-46358936	chr11	+	46357528	46358814	True	NM_000741,NM_201532,NM_201533	chr11,chr11,chr11	-,+,+	CHRM4,DGKZ,DGKZ	49343,-3124,8002
chr19:10306826-10307491	chr19	+	10307320	10307521	True	NM_001130823,NR_036206,NM_001379	chr19,chr19,chr19	-,+,-	DNMT1,MIR4322,DNMT1	-1565,33567,-1565
chrX:145701560-145702000	chr16	+	89345570	89345698	False	NR_037705,NM_013275	chr16,chr16	+,-	ZNF778,ANKRD11	-61510,211321
chrX:145701560-145702000	chrX	+	145701657	145701845	True	NM_001144064	chrX	+	CXorf51	189456
chr1:202136806-202137216	chr1	+	202136879	202137213	True	NR_002930,NR_037663,NR_037664,NM_001199797,NM_080588,NM_002832	chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,-,-,-	PTPRVP,PTPN7,PTPN7,PTPN7,PTPN7,PTPN7	-15,-6163,-6163,-6163,-7760,-6163
chr14:70654426-70654637	chr14	+	70654563	70654683	True	NM_058240,NM_182932,NM_033262,NM_003813,NM_183002	chr14,chr14,chr14,chr14,chr14	-,-,-,+,-	SLC8A3,SLC8A3,SLC8A3,ADAM21,SLC8A3	1154,1154,1154,269533,1154
chr19:35626493-35626813	chr19	+	35626639	35626825	True	NM_005031,NM_021902,NM_139284,NM_022006	chr19,chr19,chr19,chr19	+,+,-,+	FXYD1,FXYD1,LGI4,FXYD7	3566,2906,-461,7328
chr1:169336852-169337188	chr1	+	169336855	169337235	True	NM_003666,NM_013330,NM_197972	chr1,chr1,chr1	+,-,-	BLZF1,NME7,NME7	-22,1,1
chr4:83803477-83804904	chr4	+	83803719	83804691	True	NM_001191049,NM_024672,NM_014933,NM_016211,NM_001077206,NM_001077207,NM_001077208	chr4,chr4,chr4,chr4,chr4,chr4,chr4	-,+,-,-,-,-,-	SEC31A,THAP9,SEC31A,SEC31A,SEC31A,SEC31A,SEC31A	7706,17145,7790,7783,7783,7783,7783
chr11:6639324-6640445	chr11	+	6639391	6640463	True	NM_001014795,NM_000391,NM_006284	chr11,chr11,chr11	+,-,-	ILK,TPP1,TAF10	-14236,279,-5946
chr17:79344544-79345364	chr17	+	79344805	79345411	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	28128,-40331
chr20:42880570-42880867	chr20	+	42880572	42880732	True	NM_024034,NM_016470	chr20,chr20	+,-	GDAP1L1,C20orf111	-4717,-41141
chr1:161199673-161200607	chr1	+	161199837	161200458	True	NM_001077470,NM_001077471,NM_001077472,NM_001077473,NM_001077474,NM_001643,NM_001077476,NM_001077477,NM_001077478,NM_001077479,NM_001077469,NM_001077481,NM_001077480,NM_001077482,NM_032174,NM_005122,NM_001077475	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,-,-,-,-,-,-,-,-,-,+,-,-	NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,APOA2,NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,TOMM40L,NR1I3,NR1I3	7593,7593,7593,7593,7593,-6419,7593,7593,7593,7593,7593,7593,7593,7593,-4055,7593,7593
chr19:39928087-39928377	chr19	+	39928218	39928402	True	NM_001111020,NM_003169,NM_001130825,NM_001130824,NM_001020	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	SUPT5H,SUPT5H,SUPT5H,SUPT5H,RPS16	7783,7885,7783,7783,-1600
chr1:68957541-68958109	chr1	+	68957757	68958118	True	NM_017779,NM_001114120,NM_001924	chr1,chr1,chr1	-,-,+	DEPDC1,DEPDC1,GADD45A	4731,4731,-806951
chrX:117262424-117262666	chrX	+	117262527	117262695	True	NM_001168301,NM_001184965	chrX,chrX	-,+	KLHL13,WDR44	-11224,217340
chr12:52940716-52942034	chr12	+	52940756	52942016	True	NM_033448,NM_002284	chr12,chr12	-,+	KRT71,KRT86	4965,-245165
chr1:211531672-211533306	chr1	+	211532070	211533337	True	NM_001164688,NM_145759	chr1,chr1	-,+	RD3,TRAF5	132972,-12425
chr16:20358638-20359129	chr16	+	20358860	20359053	True	NM_001008389,NM_017888,NM_003361	chr16,chr16,chr16	-,+,-	UMOD,ACSM5,UMOD	5039,61802,5039
chr10:103912312-103912919	chr10	+	103912455	103912941	True	NM_001113407,NM_004741	chr10,chr10	-,+	LDB1,NOLC1	-32245,-573
chr14:92334417-92335331	chr14	+	92334565	92335363	True	NM_001128596,NM_017437	chr14,chr14	-,+	TC2N,CPSF2	-685,252934
chr8:37305718-37307070	chr8	+	37305788	37306848	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	246452,298776
chr4:90230671-90230976	chr4	+	90230894	90231014	True	NM_145715,NM_198281	chr4,chr4	+,-	TIGD2,GPRIN3	-196984,-1733
chr7:5824816-5825178	chr7	+	5824821	5825016	True	NR_023382,NM_207111,NM_207116	chr7,chr7,chr7	+,-,-	ZNF815,RNF216,RNF216	37774,-3460,-3460
chr1:53103008-53103292	chr1	+	53103012	53103258	True	NM_023077,NM_001042693	chr1,chr1	-,+	SELRC1,FAM159A	60830,-3998
chr6:43196486-43196824	chr6	+	43196606	43196800	True	NM_006443,NM_199184,NM_032538	chr6,chr6,chr6	-,-,+	C6orf108,C6orf108,TTBK1	461,461,14421
chr11:88739163-88740056	chr11	+	88739261	88739912	True	NM_001143831,NM_000372	chr11,chr11	-,+	GRM5,TYR	41383,171127
chr4:49515376-49516697	chr19	-	44961511	44961999	False	NM_001205280,NM_014518	chr19,chr19	+,-	LOC147710,ZNF229	154940,-8846
chr4:49515376-49516697	chr4	+	49515683	49516625	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-527469,-606868
chr4:49515376-49516697	chr1	-	143280226	143280570	False	NR_033189,NR_027468	chr1,chr1	+,-	LOC100130000,FLJ39739	406559,464231
chr20:18794850-18795557	chr20	+	18794942	18795597	True	NR_026883,NM_178483	chr20,chr20	-,+	HSPC072,C20orf79	-19714,-634
chr3:3155226-3155888	chr3	+	3155231	3155647	True	NM_000564,NM_175728,NM_182916,NM_175725,NM_175724,NM_175727,NM_175726	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,+,-,-,-,-	IL5RA,IL5RA,TRNT1,IL5RA,IL5RA,IL5RA,IL5RA	-3173,-3173,12952,-3173,-3173,-3173,-3173
chr4:122791767-122792822	chr4	+	122791881	122792291	True	NM_005033,NM_176824,NM_018190	chr4,chr4,chr4	+,-,-	EXOSC9,BBS7,BBS7	-69460,-229,-229
chr6:138191593-138192204	chr6	+	138191597	138192243	True	NM_006290,NM_022121	chr6,chr6	+,-	TNFAIP3,PERP	-3068,236467
chr21:44780353-44781232	chr21	+	44780558	44781132	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	88771,65920
chr11:67572602-67572809	chr11	+	67572607	67572753	True	NM_007103,NR_024249	chr11,chr11	+,-	NDUFV1,LOC645332	-198335,104
chr9:132567915-132568322	chr9	+	132567951	132568213	True	NM_000113,NM_014506	chr9,chr9	-,+	TOR1A,TOR1B	18285,-2570
chr14:77228254-77228535	chr14	+	77228279	77228583	True	NM_015305,NM_014909	chr14,chr14	-,+	ANGEL1,VASH1	50750,-95
chr4:82129889-82131160	chr4	+	82129890	82130994	True	NM_006259,NM_001201	chr4,chr4	-,+	PRKG2,BMP3	-3675,-177823
chr2:113300264-113301863	chr2	+	113300414	113301276	True	NM_001137604,NR_033871,NM_019014	chr2,chr2,chr2	+,-,+	POLR1B,FLJ42351,POLR1B	-973,100543,-973
chr6:165558292-165558666	chr6	+	165558319	165558701	True	NM_144980,NR_027284	chr6,chr6	-,+	C6orf118,LOC441177	164460,842337
chr4:71576309-71576969	chr4	+	71576957	71577017	True	NM_144646,NM_001130709	chr4,chr4	-,+	IGJ,RUFY3	-44609,-6354
chr16:2518534-2519755	chr16	+	2518589	2519689	True	NM_001199107,NM_006181,NM_020705,NM_001048212,NM_025108	chr16,chr16,chr16,chr16,chr16	+,+,+,-,+	TBC1D24,NTN3,TBC1D24,CEMP1,C16orf59	5457,1810,5457,61772,-8525
chr6:13706430-13706847	chr6	+	13706587	13706658	True	NM_005493,NM_016167	chr6,chr6	-,+	RANBP9,NOL7	5195,-91081
chr3:42916063-42916636	chr3	+	42916065	42916629	True	NM_207404,NM_004391	chr3,chr3	+,-	ZNF662,CYP8B1	30772,1054
chr14:60631476-60631763	chr14	+	60631522	60631812	True	NM_022495,NM_016029	chr14,chr14	+,-	C14orf135,DHRS7	-72944,449
chr6:6607074-6608055	chr6	+	6607305	6607432	True	NM_004271,NR_026970	chr6,chr6	+,-	LY86,LY86-AS1	-18422,15684
chr12:4702575-4703258	chr12	+	4702611	4703295	True	NM_006422,NM_003845	chr12,chr12	-,+	AKAP3,DYRK4	51098,-3418
chr7:50859725-50860374	chr7	+	50859862	50860234	True	NM_001001555,NR_033845	chr7,chr7	-,+	GRB10,LOC100129427	975,-260457
chr19:51380094-51380812	chr19	+	51380161	51380655	True	NR_002948,NM_005551,NM_001002231	chr19,chr19,chr19	-,+,+	KLKP1,KLK2,KLK2	19049,-3523,-3523
chr11:61246417-61246635	chr11	+	61246491	61246681	True	NM_001136040,NM_145017,NM_001170753	chr11,chr11,chr11	-,+,+	CPSF7,C11orf66,C11orf66	-49027,1903,1903
chr14:69866147-69867094	chr14	+	69866202	69867121	True	NM_004450,NM_018375	chr14,chr14	-,+	ERH,SLC39A9	-1181,-846
chr16:29791667-29791887	chr16	+	29791667	29791931	True	NM_175900,NM_152338	chr16,chr16	-,+	C16orf54,ZG16	-34327,-2157
chr9:79057070-79058491	chr9	+	79057074	79057982	True	NM_001097634,NM_018339	chr9,chr9	+,-	GCNT1,RFK	-543,-47630
chr12:80877535-80879117	chr12	+	80878217	80879081	True	NR_030348,NM_001145026	chr12,chr12	-,+	MIR617,PTPRQ	347377,-40149
chr21:44809673-44809966	chr21	+	44809679	44809886	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	60017,37167
chr19:50888508-50889485	chr19	+	50888736	50889393	True	NM_007121,NM_002691,NM_004851	chr19,chr19,chr19	+,+,-	NR1H2,POLD1,NAPSA	-9102,-1194,-19805
chr11:6516787-6518035	chr11	+	6516916	6517667	True	NM_173589,NM_144666,NM_012402	chr11,chr11,chr11	+,+,-	DNHD1,DNHD1,ARFIP2	858,858,-14321
chr1:155904845-155905100	chr1	+	155904849	155905009	True	NM_014949,NR_003005,NM_181885	chr1,chr1,chr1	-,-,+	KIAA0907,SCARNA4,RXFP4	-661,-8972,6470
chr14:35099449-35099667	chr14	+	35099451	35099725	True	NR_002937,NM_021249,NM_152233	chr14,chr14,chr14	+,-,-	C14orf19,SNX6,SNX6	309402,-136,-85
chr16:29471442-29471903	chr16	+	29471767	29471879	True	NM_177552,NR_037608,NR_037609,NM_001017390,NM_001014999,NR_002556,NM_001015000,NM_024044,NM_001031827,NM_001039182,NR_002557,NM_178044	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,-,+,+,-,-,-,+	SULT1A3,SLX1A-SULT1A3,SLX1B-SULT1A4,SULT1A4,SLX1A,LOC388242,SLX1A,SLX1B,BOLA2,BOLA2B,LOC613038,SLX1B	-611,-5406,-5406,-611,-5996,7070,-5996,-5996,-5482,-5482,7070,-5996
chr16:29471442-29471903	chr16	+	30211109	30211221	False	NM_177552,NR_037608,NR_037609,NM_001017390,NM_001014999,NR_002556,NM_001015000,NM_024044,NM_001031827,NM_001039182,NR_002557,NM_178044	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,-,+,+,-,-,-,+	SULT1A3,SLX1A-SULT1A3,SLX1B-SULT1A4,SULT1A4,SLX1A,LOC388242,SLX1A,SLX1B,BOLA2,BOLA2B,LOC613038,SLX1B	-611,-5406,-5406,-611,-5996,7077,-5996,-5996,-5482,-5482,7077,-5996
chr2:68959567-68959773	chr2	+	68959574	68959788	True	NM_001007231,NM_001166277,NM_014482	chr2,chr2,chr2	+,+,-	ARHGAP25,ARHGAP25,BMP10	2124,2124,138911
chr17:80417667-80418494	chr17	+	80417769	80418073	True	NR_036519,NM_012336,NM_001038618,NM_001193657,NR_036516,NM_001193653,NM_031968,NM_001033046,NM_001100408,NR_036514,NR_036517,NM_001193654,NM_001083608,NR_036518,NM_001100407	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,+,-,-,-,+,-,-,-,-,-,+,-,-	C17orf62,NARF,NARF,C17orf62,C17orf62,C17orf62,NARF,C17orf62,C17orf62,C17orf62,C17orf62,C17orf62,NARF,C17orf62,C17orf62	-9062,-1291,-1771,-9062,-9062,-9062,-1291,-9062,-9062,-9062,-9062,-9062,-1291,-9062,-9062
chrX:13060076-13061506	chrX	+	13060553	13061542	True	NM_021109,NM_174901	chrX,chrX	+,-	TMSB4X,FAM9C	-67378,1425
chr6:14817621-14817822	chr6	+	14817639	14817855	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	428671,845484
chr12:3859193-3860712	chr12	+	3859565	3860687	True	NM_001144958,NM_001144959,NM_032680,NM_019854	chr12,chr12,chr12,chr12	-,-,-,+	EFCAB4B,EFCAB4B,EFCAB4B,PRMT8	1736,1736,1736,-259191
chr3:3145972-3146348	chr3	+	3146038	3146396	True	NM_000564,NM_175728,NM_182916,NM_175725,NM_175724,NM_175727,NM_175726	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,+,-,-,-,-	IL5RA,IL5RA,TRNT1,IL5RA,IL5RA,IL5RA,IL5RA	5712,5712,22203,5712,5712,5712,5712
chr16:19126383-19127246	chr16	+	19126452	19127278	True	NM_001034841,NM_015092,NR_028028	chr16,chr16,chr16	+,-,+	ITPRIPL2,SMG1,ITPRIPL2	-1249,-188726,-1249
chr1:157739510-157739769	chr1	+	157739515	157739785	True	NM_030764,NM_018240	chr1,chr1	-,+	FCRL2,KIRREL	7187,223277
chr14:105716811-105717014	chr14	+	105716821	105716945	True	NM_145685,NM_033271	chr14,chr14	-,+	BRF1,BTBD6	-2599,-1993
chr5:53154957-53155217	chr5	+	53154957	53155157	True	NR_030307,NM_002495	chr5,chr5	-,+	MIR581,NDUFS4	92322,-298543
chr2:127315002-127315759	chr2	+	127315204	127315780	True	NM_002101,NM_139348	chr2,chr2	+,-	GYPC,BIN1	97903,549134
chr1:150226495-150227485	chr1	+	150226689	150227523	True	NM_012113,NM_001077628	chr1,chr1	+,-	CA14,APH1A	2694,14065
chr10:51831358-51831935	chr10	+	51831361	51831553	True	NM_018232,NM_001005751,NM_001143974	chr10,chr10,chr10	+,+,-	FAM21B,FAM21A,ASAH2	6332,-3728,176873
chr10:51831358-51831935	chr10	+	46226499	46226555	False	NM_174890,NM_015262,NM_001169106,NM_001169107	chr10,chr10,chr10,chr10	-,+,+,+	ANUBL1,FAM21C,FAM21C,FAM21C	-58248,-3908,-3908,-3908
chr19:3930856-3931178	chr19	+	3930877	3931083	True	NM_170678,NR_030367	chr19,chr19	+,-	ITGB1BP3,MIR637	2017,30477
chr11:126040501-126041400	chr11	+	126040835	126041281	True	NM_001144827,NM_024556	chr11,chr11	-,+	RPUSD4,FAM118B	40356,40337
chr14:102414810-102415399	chr14	+	102414867	102415351	True	NM_001376,NM_005348	chr14,chr14	+,-	DYNC1H1,HSP90AA1	15513,138211
chr3:188887247-188888063	chr3	+	188887364	188888077	True	NM_198485,NM_018192	chr3,chr3	+,-	TPRG1,LEPREL1	1685,950882
chr6:84579464-84580786	chr6	+	84579696	84580638	True	NR_026669,NM_016230	chr6,chr6	-,+	SNAP91,CYB5R4	-160569,-10391
chr17:43483073-43483324	chr17_ctg5_hap1	+	98251	98455	False	NM_001159330,NM_001113738	chr17_ctg5_hap1,chr17_ctg5_hap1	-,+	ARHGAP27,ARL17A	180,97265
chr17:43483073-43483324	chr17	+	43483115	43483319	True	NM_001159330,NR_024435	chr17,chr17	-,+	ARHGAP27,LOC100133991	180,-143608
chr12:48883663-48884782	chr12	+	48883818	48884796	True	NM_152319,NM_002289	chr12,chr12	+,-	C12orf54,LALBA	-7590,79083
chr1:64017184-64019101	chr1	+	64017450	64018972	True	NR_002771,NM_014288	chr1,chr1	+,-	DLEU2L,ITGB3BP	-2860,-28615
chr2:26698652-26698949	chr2	+	26698718	26698910	True	NM_194322,NM_194323,NM_004802,NM_145038	chr2,chr2,chr2,chr2	-,-,-,+	OTOF,OTOF,OTOF,CCDC164	2050,2050,2050,-73985
chr14:35405324-35406327	chr14	+	35405531	35406109	True	NR_002937,NM_182648	chr14,chr14	+,-	C14orf19,BAZ1A	3018,-60678
chr17:34900837-34901111	chr17	+	34900880	34900944	True	NM_001163735,NM_024835,NM_178517,NM_001033580,NM_025109	chr17,chr17,chr17,chr17,chr17	-,+,+,-,-	MYO19,GGNBP2,PIGW,MYO19,MYO19	-9575,-194,-9528,-9575,-9575
chr7:111994271-111994867	chr7	+	111994388	111994755	True	NM_001007245,NM_014705	chr7,chr7	+,-	IFRD1,DOCK4	68443,-147926
chr19:56048468-56049189	chr19	+	56048572	56048666	True	NM_001144950,NM_001199824,NM_001101401	chr19,chr19,chr19	+,-,-	SSC5D,LOC100130827,SBK2	-48753,8293,-137
chr4:144480644-144480870	chr4	+	144480752	144480908	True	NM_001168235,NR_003675	chr4,chr4	-,+	FREM3,LOC441046	140970,-178
chr6:83073658-83073922	chr6	+	83073832	83073934	True	NM_006670,NM_001166392,NM_015525	chr6,chr6,chr6	+,+,-	TPBG,TPBG,IBTK	-960,26,-116384
chr12:133619173-133620430	chr12	+	133619231	133620231	True	NM_003428,NM_001164715,NM_001127372	chr12,chr12,chr12	+,-,+	ZNF84,ZNF605,ZNF84	-5413,-86339,-5311
chr21:45233000-45233478	chr21	+	45233090	45233250	True	NR_026961,NM_003683	chr21,chr21	-,+	LOC284837,RRP1	-642,-23723
chr19:56986690-56988283	chr19	+	56986786	56988166	True	NR_036521,NR_036522,NM_022103,NR_030740	chr19,chr19,chr19,chr19	+,+,-,-	LOC100128252,LOC100128252,ZNF667,ZNF667	1076,1326,654,654
chr12:80087400-80088021	chr12	+	80087405	80087783	True	NR_031700,NM_002583	chr12,chr12	+,-	MIR1252,PAWR	-274426,-2615
chr12:132904190-132904504	chr12	+	132904239	132904471	True	NM_001122636,NR_024563	chr12,chr12	-,+	GALNT9,LOC100130238	1484,-52313
chr10:74651507-74652602	chr10	+	74651993	74652380	True	NM_152635,NM_032562	chr10,chr10	+,-	OIT3,PLA2G12B	958,62181
chr4:185654715-185655029	chr4	+	185654716	185654970	True	NM_152683,NM_024629	chr4,chr4	+,-	CCDC111,MLF1IP	-84000,366
chr12:88428892-88429372	chr12	+	88428969	88429416	True	NM_152589,NM_001009894	chr12,chr12	-,+	C12orf50,C12orf29	-5793,140
chr5:33440789-33441103	chr5	+	33440801	33441103	True	NM_152295,NM_030955	chr5,chr5	+,-	TARS,ADAMTS12	-8,451071
chr20:18447755-18447969	chr20	+	18447793	18447987	True	NR_036160,NM_006466,NM_001099407	chr20,chr20,chr20	+,+,-	MIR3192,POLR3F,C20orf12	3271,45,-10
chr14:94494491-94495857	chr14	+	94494517	94495873	True	NM_023112,NM_020414,NM_001202429	chr14,chr14,chr14	+,-,-	OTUB2,DDX24,ASB2	-1845,51735,-51441
chr20:48729111-48729325	chr20	+	48729155	48729369	True	NM_021988,NM_001032288,NM_022442,NM_005194,NM_199144	chr20,chr20,chr20,chr20,chr20	-,-,-,+,-	UBE2V1,UBE2V1,UBE2V1,CEBPB,UBE2V1	3175,391,3172,78006,3175
chr16:11348695-11348937	chr16	+	11348759	11348985	True	NM_003745,NM_152308	chr16,chr16	-,+	SOCS1,C16orf75	1104,90325
chr19:36235040-36235566	chr19	+	36235043	36235609	True	NM_024660,NM_144987,NM_172341,NM_001040425,NM_019104	chr19,chr19,chr19,chr19,chr19	-,-,+,-,+	IGFLR1,U2AF1L4,PSENEN,U2AF1L4,LIN37	-1692,777,884,777,3902
chr17:34261838-34262510	chr17	+	34261921	34262377	True	NM_001163124,NM_001163125,NM_001034836,NM_001163120,NM_001163121,NM_001163122,NM_001163130,NM_020426,NM_145654,NM_003487,NR_027999,NR_027998,NR_027997,NR_027996,NR_028000,NM_001199951	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,-,-,-,-,+,-,-,-,-,-,-	RDM1,RDM1,RDM1,RDM1,RDM1,RDM1,RDM1,LYZL6,RDM1,TAF15,RDM1,RDM1,RDM1,RDM1,RDM1,LYZL6	-4618,-4618,-4141,-4141,-4141,-4618,-4618,4233,-4141,-125484,-4618,-4141,-4141,-4141,-4618,8376
chr1:174967661-174968501	chr1	+	174967740	174968372	True	NM_014412,NM_022100,NM_001007214	chr1,chr1,chr1	+,-,+	CACYBP,MRPS14,CACYBP	519,24269,198
chr1:1656590-1656941	chr1	+	1656598	1656984	True	NM_024011,NM_033489,NM_033488,NR_002946,NM_033487,NM_033486,NM_033492,NM_033493,NM_033529	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,-,-,-,-	CDK11A,CDK11B,CDK11B,MMP23A,CDK11B,CDK11B,CDK11B,CDK11B,CDK11A	-807,-823,-823,-25271,-823,-823,-823,-823,-807
chr1:1656590-1656941	chr1	+	1591309	1591585	False	NM_001110781,NR_002946	chr1,chr1	-,+	SLC35E2B,MMP23A	32714,-23201
chr1:163172912-163173260	chr1	+	163172924	163173284	True	NM_003617,NM_001195303,NM_031423	chr1,chr1,chr1	-,-,+	RGS5,RGS5,NUF2	39,-299,118438
chr1:245005031-245005292	chr1	+	245005030	245005159	True	NR_026778,NM_198076	chr1,chr1	-,+	NCRNA00201,FAM36A	5141,-6446
chr12:110320553-110322084	chr12	+	110320755	110321872	True	NM_016433,NM_001143852	chr12,chr12	-,+	GLTP,TCHP	-2462,16206
chr6:45314594-45316334	chr6	+	45314667	45316030	True	NM_003599,NM_001024630	chr6,chr6	-,+	SUPT3H,RUNX2	29605,-18667
chr3:57995401-57996567	chr3	+	57995585	57996526	True	NM_001164317,NM_001457,NM_004944,NM_001164318,NM_001164319	chr3,chr3,chr3,chr3,chr3	+,+,-,+,+	FLNB,FLNB,DNASE1L3,FLNB,FLNB	-1509,-1509,203922,-1509,-1509
chr13:33771209-33772027	chr13	+	33771271	33771888	True	NM_004795,NM_052851	chr13,chr13	+,-	KL,STARD13	-180751,8350
chr19:34113402-34113625	chr19	+	34113403	34113481	True	NM_001166057,NM_001127895,NM_001127896	chr19,chr19,chr19	-,+,+	PEPD,CHST8,CHST8	-100604,-593,-581
chr7:106683083-106683541	chr7	+	106683307	106683565	True	NM_002736,NM_175884	chr7,chr7	+,-	PRKAR2B,FLJ36031	1612,-381673
chr18:13610928-13611337	chr18	+	13610927	13611308	True	NM_001003675,NM_001003674,NM_001098801,NM_181483,NM_004338	chr18,chr18,chr18,chr18,chr18	+,+,-,+,+	C18orf1,C18orf1,C18orf19,C18orf1,C18orf1	356,356,115340,9558,9558
chr2:111141817-111142474	chr2	+	111141884	111142484	True	NR_037626,NR_027244	chr2,chr2	+,-	LOC100507334,LOC151009	-138720,45
chr2:111141817-111142474	chr2	-	110744174	110744774	False	NR_037627,NR_036225	chr2,chr2	+,-	LOC100288570,MIR4267	-38958,82895
chr13:24000634-24001903	chr13	+	24000845	24001822	True	NM_001204459,NM_014363	chr13,chr13	+,-	TNFRSF19,SACS	142686,6069
chrX:70986666-70986930	chrX	+	70986799	70986941	True	NR_001568,NM_001145140,NM_001145139	chrX,chrX,chrX	-,+,+	BCYRN1,CXorf49,CXorf49B	-37837,-3710,-3710
chrX:70986666-70986930	chrX	-	70882957	70883099	False	NR_034004,NM_001504	chrX,chrX	+,-	LOC100132741,CXCR3	33946,-44590
chrX:70986666-70986930	chrX	-	70934333	70934475	False	NR_034005,NM_001145140,NM_001145139	chrX,chrX,chrX	+,-,-	FLJ46446,CXorf49,CXorf49B	-17338,3710,3710
chr8:125489864-125490703	chr8	+	125489955	125490595	True	NM_001146160,NM_007218	chr8,chr8	-,+	TATDN1,RNF139	60786,-3007
chr4:37245914-37246178	chr4	+	37245929	37246227	True	NM_001085399,NM_001144990	chr4,chr4	-,+	RELL1,KIAA1239	441822,462
chr16:3162076-3162451	chr16	+	3162096	3162422	True	NM_001042428,NR_024167,NR_024166,NM_003456	chr16,chr16,chr16,chr16	+,-,-,+	ZNF205,MGC3771,MGC3771,ZNF205	140,3227,3227,140
chr14:51705617-51705972	chr14	+	51705621	51705918	True	NM_052978,NM_030755	chr14,chr14	-,+	TRIM9,TMX1	-143199,967
chr1:169707776-169708131	chr1	+	169707788	169708141	True	NM_000450,NM_018186	chr1,chr1	-,+	SELE,C1orf112	-4568,56408
chr4:10021622-10022485	chr4	+	10021743	10022293	True	NM_000798,NM_020041	chr4,chr4	+,-	DRD5,SLC2A9	-238536,871
chr9:139557997-139559063	chr9	+	139558033	139559063	True	NM_016215,NM_201446,NR_029695,NM_001012727	chr9,chr9,chr9,chr9	+,+,+,-	EGFL7,EGFL7,MIR126,AGPAT2	-702,-707,5990,22898
chrX:140083960-140085147	chrX	+	140084796	140084966	True	NM_032461,NR_031725,NM_145664,NM_139019	chrX,chrX,chrX,chrX	+,-,+,+	SPANXB1,MIR320D2,SPANXB2,SPANXF1	-99,-76412,-99,-99
chrX:140083960-140085147	chrX	+	140096801	140096971	False	NM_032461,NR_031725,NM_145664,NM_139019	chrX,chrX,chrX,chrX	+,-,+,+	SPANXB1,MIR320D2,SPANXB2,SPANXF1	-99,-88417,-99,-99
chr21:43491418-43491694	chr21	+	43491585	43491679	True	NM_173568,NR_027243,NM_001199527,NM_001004416,NM_001199528	chr21,chr21,chr21,chr21,chr21	+,-,+,+,+	UMODL1,C21orf128,UMODL1,UMODL1,UMODL1	-210,37015,-8568,-210,-8568
chr5:69713512-69714839	chr5	+	69714566	69714756	True	NR_033417,NR_033968	chr5,chr5	+,-	GTF2H2B,LOC100049076	-3426,136452
chr5:69713512-69714839	chr5	-	70359941	70360131	False	NM_022877,NM_001515	chr5,chr5	+,-	SMN2,GTF2H2	-139232,3422
chr5:69713512-69714839	chr5	+	68859420	68859610	False	NR_027439,NM_001042490,NM_001098728	chr5,chr5,chr5	-,+,+	LOC100272216,GTF2H2D,GTF2H2C	69476,-3403,-3426
chr1:55352547-55352886	chr1	+	55352611	55352683	True	NM_014762,NM_152607	chr1,chr1	-,+	DHCR24,C1orf177	288,-80926
chr19:45544400-45545699	chr19	+	45544594	45545329	True	NM_145288,NM_007056	chr19,chr19	-,+	ZNF296,CLASRP	34410,-2347
chr1:3369826-3370285	chr1	+	3369836	3370304	True	NR_030277,NM_014448	chr1,chr1	-,+	MIR551A,ARHGEF16	107100,842
chr17:66096526-66097264	chr17	+	66096628	66097307	True	NM_181656,NR_027418	chr17,chr17	-,+	C17orf58,LOC100499466	-106863,388
chr20:61449321-61449902	chr20	+	61449422	61449892	True	NM_001853,NM_006602	chr20,chr20	+,-	COL9A3,TCFL5	-1059,43273
chr11:102494013-102494809	chr11	+	102494102	102494762	True	NM_001166,NM_004771	chr11,chr11	+,-	BIRC2,MMP20	-276187,1351
chr16:401532-401977	chr16	+	401806	402004	True	NM_181050,NM_003502,NR_024453	chr16,chr16,chr16	-,-,+	AXIN1,AXIN1,LOC100134368	722,722,30236
chr1:152748524-152748989	chr1	+	152748524	152748836	True	NM_178353,NM_178351,NM_178354	chr1,chr1,chr1	+,-,+	LCE1E,LCE1C,LCE1F	9916,30321,11
chr14:73453531-73454778	chr14	+	73453555	73454667	True	NM_178441,NM_181341	chr14,chr14	-,+	ZFYVE1,DCAF4	-83,-60576
chr8:82651422-82652754	chr8	+	82651515	82652702	True	NR_033196,NM_152284	chr8,chr8	-,+	ZFAND1,CHMP4C	-17976,-6886
chr3:51744382-51745103	chr3	+	51744381	51745099	True	NM_001143833,NM_001130063,NM_000839	chr3,chr3,chr3	-,+,+	IQCF6,GRM2,GRM2	68154,-3356,-3356
chr17:36102314-36102537	chr17	+	36102350	36102536	True	NM_001165923,NM_032258,NM_000458	chr17,chr17,chr17	-,+,-	HNF1B,TBC1D3F,HNF1B	2616,181423,2616
chr10:95358207-95360100	chr10	+	95358292	95359948	True	NM_006744,NM_006204	chr10,chr10	-,+	RBP4,PDE6C	1095,12396
chr2:45893573-45894213	chr2	+	45893615	45893917	True	NM_018079,NM_005400	chr2,chr2	-,+	SRBD1,PRKCE	-55182,-14627
chr14:96115601-96116977	chr14	+	96115721	96116755	True	NM_001098725,NR_028288	chr14,chr14	-,+	TCL1A,TCL6	63828,759
chr17:32683476-32685122	chr17	+	32683522	32685152	True	NM_005408,NM_002981	chr17,chr17	+,-	CCL13,CCL1	-102,5150
chr5:55032659-55033055	chr5	+	55032666	55032909	True	NM_173514,NM_001142549,NM_001166533,NM_024415	chr5,chr5,chr5,chr5	-,+,+,+	SLC38A9,DDX4,DDX4,DDX4	-24503,935,935,935
chr16:3085095-3085462	chr16	+	3085199	3085329	True	NM_001103175,NM_024339	chr16,chr16	-,+	CCDC64B,THOC6	263,-11218
chr17:4630388-4630791	chr17	+	4630411	4630537	True	NM_001001683,NM_022059	chr17,chr17	+,-	MED11,CXCL16	4185,12744
chr20:44486066-44486287	chr20	+	44486078	44486325	True	NM_005469,NR_037628,NM_080752	chr20,chr20,chr20	-,+,+	ACOT8,ZSWIM3,ZSWIM3	-30,-13,-13
chr6:14956488-14957259	chr6	+	14956642	14957153	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	289373,706195
chr5:60241738-60243318	chr5	+	60241750	60242933	True	NM_000082,NM_174889	chr5,chr5	-,+	ERCC8,NDUFAF2	-845,-845
chr2:170660339-170661146	chr2	+	170660520	170660735	True	NM_003142,NM_014168	chr2,chr2	+,-	SSB,METTL5	-5182,20674
chr21:9960135-9961275	chr21	+	9960241	9960755	True	NM_001033515,NR_037458	chr21,chr21	-,+	LOC100132288,MIR3687	7882,-134094
chr21:45233583-45234332	chr21	+	45233652	45234379	True	NR_026961,NM_003683	chr21,chr21	-,+	LOC284837,RRP1	-1204,-24285
chr7:27136733-27137920	chr7	+	27136739	27137582	True	NM_005522,NM_153620,NM_006735,NR_002795	chr7,chr7,chr7,chr7	-,-,-,+	HOXA1,HOXA1,HOXA2,HOXA11-AS1	-1114,-1114,4863,87444
chr1:211853528-211853918	chr1	+	211853907	211853975	True	NR_026761,NM_002497,NM_001204182,NM_001204183	chr1,chr1,chr1,chr1	+,-,-,-	C1orf97,NEK2,NEK2,NEK2	-297871,-4935,-4935,-4935
chr3:10180483-10182322	chr3	+	10180553	10182232	True	NM_000551,NM_198156,NM_001164839	chr3,chr3,chr3	+,+,-	VHL,VHL,C3orf24	1086,1086,-30638
chr1:17577304-17577787	chr1	+	17577382	17577816	True	NM_016233,NM_007365	chr1,chr1	+,-	PADI3,PADI2	-1840,-131434
chr2:102995623-102996910	chr2	+	102996201	102996948	True	NM_003855,NM_032718	chr2,chr2	+,-	IL18R1,MFSD9	-17155,356440
chr20:17549770-17550303	chr20	+	17549785	17549855	True	NM_001011546,NM_001161705,NM_006870	chr20,chr20,chr20	+,-,+	DSTN,BFSP1,DSTN	743,-10180,743
chr3:33317847-33318227	chr3	+	33317961	33318132	True	NM_012157,NM_015551,NM_001171713	chr3,chr3,chr3	+,-,+	FBXL2,SUSD5,FBXL2	801,-57254,804
chr12:15034234-15035719	chr12	+	15034645	15035221	True	NM_001190839,NM_000900,NM_175874	chr12,chr12,chr12	-,-,+	MGP,MGP,C12orf60	3682,3682,-78190
chr17:80673521-80673892	chr17	+	80673535	80673839	True	NM_024619,NM_006822	chr17,chr17	+,-	FN3KRP,RAB40B	742,-16937
chr4:10035025-10035428	chr4	+	10035035	10035451	True	NM_000798,NM_001001290	chr4,chr4	+,-	DRD5,SLC2A9	-251828,6471
chr14:50102323-50102848	chr14	+	50102345	50102435	True	NM_002408,NM_018139,NM_001083908	chr14,chr14,chr14	+,-,-	MGAT2,C14orf104,C14orf104	-14914,-397,-397
chr2:71682604-71684338	chr2	+	71683006	71684375	True	NM_001130982,NM_001130983,NM_001130980,NM_001130981,NM_001130986,NM_001130455,NM_001130984,NM_001130985,NM_003494,NM_020459,NM_001130977,NM_001130976,NM_001130979,NM_001130978,NM_001130987	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,+,+,+,+,+,-,+,+,+,+,+	DYSF,DYSF,DYSF,DYSF,DYSF,DYSF,DYSF,DYSF,DYSF,PAIP2B,DYSF,DYSF,DYSF,DYSF,DYSF	9456,9456,-2304,-2304,9456,9456,9456,9456,-2304,-228773,-2304,-2304,-2304,-2304,9456
chr1:31194584-31196421	chr1	+	31194860	31195805	True	NR_034182,NM_002379	chr1,chr1	+,-	LOC100129196,MATN1	-3292,677
chr2:166789905-166790934	chr2	+	166789904	166790847	True	NM_024969,NM_024753	chr2,chr2	+,-	CSRNP3,TTC21B	-361116,19554
chr1:43736728-43737253	chr1	+	43736732	43737221	True	NM_182517,NM_144626	chr1,chr1	-,+	C1orf210,TMEM125	14080,-1118
chr17:42148569-42149130	chr17	+	42148600	42149122	True	NR_028581,NR_028582,NM_138387,NM_152344	chr17,chr17,chr17,chr17	+,+,+,-	G6PC3,G6PC3,G6PC3,LSM12	-553,-553,-553,-3613
chr20:44650820-44651191	chr20	+	44650869	44651238	True	NM_001134771,NM_022095,NM_020708	chr20,chr20,chr20	+,-,+	SLC12A5,ZNF335,SLC12A5	-591,-50036,6582
chr1:63790389-63791909	chr1	+	63790396	63791875	True	NM_012183,NM_014288	chr1,chr1	+,-	FOXD3,ITGB3BP	-1718,197017
chr10:50506147-50506694	chr10	+	50506239	50506732	True	NM_001080520,NM_199459,NM_001135196	chr10,chr10,chr10	-,+,+	DRGX,C10orf71,C10orf71	93225,454,454
chr19:39572692-39574133	chr19	+	39572767	39574115	True	NM_178820,NM_001004318	chr19,chr19	-,+	FBXO27,PAPL	-49569,829
chr16:766586-766886	chr16	+	766620	766784	True	NM_001031737,NM_024042,NM_023933	chr16,chr16,chr16	-,+,+	CCDC78,METRN,FAM173A	9739,-1498,4373
chr9:104190442-104192189	chr9	+	104190463	104191922	True	NM_197977,NM_000035	chr9,chr9	+,-	ZNF189,ALDOB	-29355,6191
chr17:6617400-6617740	chr17	+	6617502	6617772	True	NM_177550,NM_001143838,NM_017523	chr17,chr17,chr17	-,-,+	SLC13A5,SLC13A5,XAF1	-762,-762,41383
chr2:220462914-220463969	chr2	+	220462978	220463798	True	NM_001173408,NM_052902	chr2,chr2	-,+	OBSL1,STK11IP	-26710,-433
chr19:18336744-18336968	chr19	+	18336871	18336937	True	NM_001098819,NM_001098818,NM_032683	chr19,chr19,chr19	-,-,+	PDE4C,PDE4C,MPV17L2	-1568,361,-32882
chr1:46665561-46666528	chr1	+	46665949	46666485	True	NM_001013615,NM_017739	chr1,chr1	+,-	C1orf190,POMGNT1	2520,-1828
chr11:77853032-77853664	chr11	+	77853306	77853496	True	NM_024079,NM_001007027,NM_020798	chr11,chr11,chr11	-,-,+	ALG8,ALG8,USP35	-2607,-2607,46361
chr4:190906092-190907199	chr4	+	190906451	190907219	True	NM_020040,NM_004477	chr4,chr4	-,+	TUBB4Q,FRG1	-427,-44533
chr4:190906092-190907199	chr16	-	90159236	90160007	False	NM_001098173,NR_023348	chr16,chr16	-,+	PRDM7,GAS8	-16898,-70279
chr10:70660706-70660987	chr10	+	70660815	70661001	True	NM_024045,NM_152707	chr10,chr10	+,-	DDX50,SLC25A16	32,-373535
chr2:170686227-170687741	chr2	+	170686374	170687549	True	NM_172070,NM_014168	chr2,chr2	+,-	UBR3,METTL5	-2407,-5021
chr19:11926439-11927536	chr19	+	11926711	11927201	True	NM_152357,NM_001080493	chr19,chr19	+,-	ZNF440,ZNF823	-1655,-76951
chr15:41783137-41785029	chr15	+	41783547	41785020	True	NM_002220,NM_001135685	chr15,chr15	+,-	ITPKA,LTK	1101,21115
chr10:135341356-135341639	chr10	+	135341383	135341543	True	NM_000773,NM_001143763	chr10,chr10	+,-	CYP2E1,SYCE1	-567,37645
chr9:35904655-35904912	chr9	+	35904678	35904874	True	NR_024283,NM_001004487,NM_001039792	chr9,chr9,chr9	+,-,+	LOC158376,OR13J1,HRCT1	4605,-34280,1314
chr19:15342182-15342866	chr19	+	15342249	15342675	True	NM_033025,NM_001142886,NM_024794	chr19,chr19,chr19	+,-,-	SYDE1,EPHX3,EPHX3	-124086,1233,606
chr15:71232088-71232349	chr15	+	71232087	71232369	True	NM_001199018,NM_020147	chr15,chr15	+,-	LRRC49,THAP10	-47125,-47315
chr7:129914374-129914995	chr7	+	129914374	129915030	True	NM_001869,NM_032842	chr7,chr7	+,-	CPA2,TMEM209	-7728,-69036
chr17:79138538-79138739	chr17	+	79138543	79138687	True	NR_027255,NM_001080395	chr17,chr17	+,-	LOC388428,AATK	619,1235
chr4:1107078-1107279	chr4	+	1107118	1107270	True	NM_001193318,NR_033768,NM_001131034,NM_021923,NM_194439	chr4,chr4,chr4,chr4,chr4	-,-,-,+,-	RNF212,TMED11P,RNF212,FGFRL1,RNF212	132,9732,132,-100917,132
chr8:7818408-7819000	chr8	+	7818453	7818821	True	NR_003668,NR_027424	chr8,chr8	-,+	DEFB109P1B,FAM66E	36272,-5969
chr8:7818408-7819000	chr8	+	12225446	12225814	False	NR_024044,NR_026789	chr8,chr8	-,+	DEFB109P1,FAM66A	32110,-5969
chr5:115298302-115298581	chr5	+	115298393	115298465	True	NR_033363,NM_173800	chr5,chr5	-,+	ATG12,AQPEP	-120845,-293
chr22:38051947-38052548	chr22	+	38051961	38052489	True	NM_020315,NM_006498	chr22,chr22	+,-	PDXP,LGALS2	2247,-75937
chrX:140786287-140786539	chrX	+	140786447	140786519	True	NM_032417,NM_013453,NM_145665	chrX,chrX,chrX	-,+,-	SPANXD,SPANXA1,SPANXE	129,-108639,186
chrX:140786287-140786539	chrX	+	140672685	140672757	False	NM_013453,NM_145662	chrX,chrX	-,-	SPANXA1,SPANXA2	129,153
chrX:140786287-140786539	chrX	-	140677937	140678009	False	NM_013453,NM_145662	chrX,chrX	+,+	SPANXA1,SPANXA2	-129,-153
chr8:22014722-22015151	chr8	+	22014726	22015140	True	NM_139278,NM_001199,NM_001172357,NR_033403,NR_033404,NM_001172410,NM_006129,NM_003018	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,+,+,+,+,+,+,+	LGI3,BMP1,SFTPC,BMP1,BMP1,SFTPC,BMP1,SFTPC	-382,7512,4043,7512,7512,4043,7512,4043
chr2:111336812-111337137	chr2	+	111336941	111337071	True	NM_001142807,NM_005054,NM_001123363,NM_032260,NM_001037866	chr2,chr2,chr2,chr2,chr2	+,-,-,-,-	ACOXL,RGPD5,RGPD6,RGPD5,RGPD6	153078,-2263,-632,-632,-632
chr2:111336812-111337137	chr2	-	110549572	110549702	False	NM_178584,NM_005054,NM_001037866,NM_032260,NM_001123363	chr2,chr2,chr2,chr2,chr2	-,+,+,+,+	SEPT10,RGPD5,RGPD6,RGPD5,RGPD6	-177789,2263,632,632,632
chr10:31252045-31252615	chr10	+	31252365	31252527	True	NM_001143769,NM_001174093	chr10,chr10	-,+	ZNF438,ZEB1	35969,355573
chr19:21106813-21108185	chr19	+	21106945	21107894	True	NM_003429,NR_034060,NM_145297	chr19,chr19,chr19	+,+,-	ZNF85,ZNF85,ZNF626	-944,-944,-262543
chr5:124079987-124080477	chr5	+	124080007	124080521	True	NM_004384,NM_020747	chr5,chr5	+,-	CSNK1G3,ZNF608	-1232265,334
chr15:77582101-77582557	chr15	+	77582185	77582295	True	NM_018200,NM_024776	chr15,chr15	+,-	HMG20A,PEAK1	130947,-4852
chr10:101845245-101845545	chr10	+	101845268	101845576	True	NR_024130,NM_001308	chr10,chr10	+,-	DNMBP-AS1,CPN1	-158353,-3626
chr12:123919129-123920603	chr12	+	123919281	123920384	True	NM_145058,NM_022717	chr12,chr12	-,+	RILPL2,SNRNP35	930,22266
chr14:105782183-105782520	chr14	+	105782182	105782540	True	NM_001519,NM_015197,NM_001100913	chr14,chr14,chr14	-,+,+	BRF1,PACS2,PACS2	-14853,-1152,-1152
chr3:140474131-140474434	chr3	+	140474134	140474464	True	NM_178177,NM_152616	chr3,chr3	-,+	NMNAT3,TRIM42	-1077249,-77322
chr2:112253378-112254942	chr2	+	112253447	112254991	True	NR_024373,NM_207003,NR_015395	chr2,chr2,chr2	-,+,-	LOC541471,BCL2L11,LOC541471	-755,-375007,-755
chr2:112253378-112254942	chr2	-	87752872	87753865	False	NM_001078170,NR_024206,NR_024204,NR_024205	chr2,chr2,chr2,chr2	-,+,+,+	RGPD2,NCRNA00152,NCRNA00152,NCRNA00152	371471,1108,1108,1108
chr6:90063159-90064707	chr6	+	90063323	90064162	True	NM_014942,NM_016021	chr6,chr6	+,-	ANKRD6,UBE2J1	78734,-704
chr14:103777870-103778670	chr14	+	103777946	103778248	True	NR_033938,NM_001969	chr14,chr14	-,+	LOC100131366,EIF5	-122581,22244
chr1:67520232-67520929	chr1	+	67520231	67520697	True	NM_144701,NM_015139	chr1,chr1	+,-	IL23R,SLC35D1	111471,-151
chr7:158623687-158624048	chr7	+	158623688	158623858	True	NM_018051,NM_020728	chr7,chr7	+,-	WDR60,ESYT2	25410,-1369
chr19:24270008-24270416	chr19	+	24270052	24270358	True	NM_203282,NR_003603	chr19,chr19	+,-	ZNF254,LOC100101266	-127,75941
chr18:72124796-72125024	chr18	+	72124825	72125068	True	NM_001044369,NM_018235	chr18,chr18	-,+	FAM69C,CNDP2	-322,38431
chr19:49468073-49468437	chr19	+	49468072	49468466	True	NM_000146,NM_001161587	chr19,chr19	+,-	FTL,GYS1	99,28194
chr1:32403076-32403457	chr1	+	32403080	32403142	True	NM_006559,NM_080391	chr1,chr1	+,-	KHDRBS1,PTP4A2	76348,896
chr6:159067495-159068053	chr6	+	159067510	159068090	True	NM_006519,NM_001009991	chr6,chr6	-,+	DYNLT1,SYTL3	-1706,2955
chr12:3856915-3858012	chr12	+	3856947	3858049	True	NM_001144958,NM_001144959,NM_032680,NM_019854	chr12,chr12,chr12,chr12	-,-,-,+	EFCAB4B,EFCAB4B,EFCAB4B,PRMT8	4367,4367,4367,-256573
chr14:50100916-50101140	chr14	+	50100919	50101113	True	NM_002408,NM_018139,NM_001083908	chr14,chr14,chr14	+,-,-	MGAT2,C14orf104,C14orf104	-13481,885,885
chr11:77299954-77300364	chr11	+	77300069	77300256	True	NM_173039,NM_001293	chr11,chr11	+,-	AQP11,CLNS1A	423,48646
chr9:33745976-33747905	chr9	+	33746176	33747732	True	NM_001197097,NR_023917,NM_007343,NM_001197098	chr9,chr9,chr9,chr9	+,-,+,+	PRSS3,PTENP1,PRSS3,PRSS3	2731,-68758,2731,3086
chr2:71684338-71684883	chr2	+	71684368	71684862	True	NM_001130982,NM_001130983,NM_001130980,NM_001130981,NM_001130986,NM_001130455,NM_001130984,NM_001130985,NM_003494,NM_020459,NM_001130977,NM_001130976,NM_001130979,NM_001130978,NM_001130987	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,+,+,+,+,+,-,+,+,+,+,+	DYSF,DYSF,DYSF,DYSF,DYSF,DYSF,DYSF,DYSF,DYSF,PAIP2B,DYSF,DYSF,DYSF,DYSF,DYSF	8969,8969,-3667,-3667,8969,8969,8969,8969,-3667,-230135,-3667,-3667,-3667,-3667,8969
chr2:20869025-20869363	chr2	+	20869024	20869370	True	NM_022460,NM_182828	chr2,chr2	-,+	HS1BP3,GDF7	-18160,-2651
chr5:153570718-153571087	chr5	+	153570772	153571066	True	NM_018691,NM_198321	chr5,chr5	-,+	FAM114A2,GALNT10	-152275,-528
chr9:117375009-117375421	chr9	+	117375078	117375472	True	NM_153045,NM_001199233	chr9,chr9	+,-	C9orf91,LOC100505478	-1424,68949
chr19:35740797-35741359	chr19	+	35741041	35741371	True	NM_205835,NM_015925,NM_152481,NM_205834	chr19,chr19,chr19,chr19	+,+,-,+	LSR,LSR,FAM187B,LSR	-1533,-1533,-21413,-1533
chr8:99957008-99957407	chr8	+	99957023	99957352	True	NM_053001,NM_006281,NM_001142462	chr8,chr8,chr8	+,-,+	OSR2,STK3,OSR2	-443,-119114,-443
chr12:105252448-105254217	chr12	+	105252610	105253345	True	NM_152318,NM_032148	chr12,chr12	+,-	C12orf45,SLC41A2	126752,69177
chr14:35101112-35102082	chr14	+	35101579	35101922	True	NR_002937,NM_021249,NM_152233	chr14,chr14,chr14	+,-,-	C14orf19,SNX6,SNX6	307205,-2264,-2213
chr3:196600565-196601576	chr3	+	196601073	196601426	True	NM_152699,NM_001042540	chr3,chr3	+,-	SENP5,NCBP2	-6411,68095
chr13:24471021-24472792	chr13	+	24471294	24472572	True	NM_001135816,NM_005932,NM_001014442,NM_001007537	chr13,chr13,chr13,chr13	+,-,+,-	PCOTH,MIPEP,PCOTH,C1QTNF9B	-7754,-7707,-8318,-169
chr12:113230083-113230372	chr12	+	113230151	113230405	True	NM_014954,NM_001143854,NM_001193521	chr12,chr12,chr12	+,+,-	RPH3A,RPH3A,RASAL1	-653,-653,343204
chr5:40836233-40837561	chr5	+	40836399	40837448	True	NM_032587,NR_002583,NR_037665,NM_000997	chr5,chr5,chr5,chr5	+,-,-,-	CARD6,SNORD72,LOC100506548,RPL37	3961,-3562,-7155,-1012
chr10:127350741-127351213	chr10	+	127350789	127351169	True	NR_033848,NM_001128202	chr10,chr10	+,-	LOC283038,C10orf122	20642,20594
chr2:101033397-101033718	chr2	+	101033572	101033744	True	NM_004854,NM_001011717	chr2,chr2	-,+	CHST10,NMS	436,53199
chr17:64225109-64225348	chr17	+	64225327	64225389	True	NM_002737,NM_000042	chr17,chr17	+,-	PRKCA,APOH	73536,217
chr1:227923419-227924434	chr1	+	227923460	227924208	True	NR_024485,NM_053052,NR_024486,NM_001161465,NM_023007	chr1,chr1,chr1,chr1,chr1	+,+,+,-,-	LOC100130093,SNAP47,LOC100130093,JMJD4,JMJD4	-7271,-814,-7271,-348,-348
chr1:226114038-226114949	chr1	+	226114306	226114942	True	NM_000120,NM_013328	chr1,chr1	+,-	EPHX1,PYCR2	-101356,-2341
chr5:38446467-38446702	chr5	+	38446501	38446725	True	NM_001127671,NM_182801	chr5,chr5	-,+	LIFR,EGFLAM	110073,-916
chr19:1568654-1569014	chr19	+	1568755	1569051	True	NR_026557,NM_203304,NM_001174118	chr19,chr19,chr19	+,-,-	PLK5P,MEX3D,MEX3D	-44728,-698,-698
chrX:67715459-67716137	chrX	+	67715639	67716185	True	NM_173834,NM_002547,NM_001195214	chrX,chrX,chrX	+,-,+	YIPF6,OPHN1,YIPF6	2438,-62340,2438
chr9:2621967-2622245	chr9	+	2622100	2622224	True	NR_015375,NM_003383,NM_001018056	chr9,chr9,chr9	-,+,+	FLJ35024,VLDLR,VLDLR	199,-358,-358
chr7:141895630-141896034	chr7	+	141895636	141895920	True	NR_024346,NR_003717	chr7,chr7	-,+	MOXD2P,LOC100124692	51016,-24725
chrX:9000651-9001293	chrX	+	9000655	9001177	True	NM_001139466,NM_205849	chrX,chrX	+,-	TBL1X,FAM9B	430157,-11
chr10:97192416-97193914	chr10	+	97192429	97193781	True	NM_006434,NM_207321,NM_001034956,NM_001034957,NM_001034954,NM_001034955	chr10,chr10,chr10,chr10,chr10,chr10	-,+,-,-,-,-	SORBS1,C10orf129,SORBS1,SORBS1,SORBS1,SORBS1	7206,-238523,7206,7206,7206,7206
chr19:13989844-13990762	chr19	+	13990068	13990281	True	NM_001098622,NR_030179,NR_029613,NM_024323	chr19,chr19,chr19,chr19	+,+,+,-	NANOS3,MIR181D,MIR181C,C19orf57	-2174,-4435,-4611,26679
chr10:52384023-52384399	chr10	+	52384135	52384341	True	NM_147156,NM_001079516	chr10,chr10	-,+	SGMS1,ASAH2B	-398,115366
chr11:123064775-123065507	chr11	+	123064921	123065471	True	NR_027288,NM_024769	chr11,chr11	+,-	LOC341056,CLMP	-176698,586
chr17:62098260-62099785	chr17	+	62098699	62099643	True	NM_001099788,NM_001099789,NM_001099786,NM_001099787,NM_001191031	chr17,chr17,chr17,chr17,chr17	-,-,-,-,+	ICAM2,ICAM2,ICAM2,ICAM2,C17orf72	-705,-705,-705,-705,-23040
chr19:34743656-34744243	chr19	+	34743953	34744289	True	NR_027620,NM_014686	chr19,chr19	-,+	LOC643719,KIAA0355	324357,1166
chr2:70312946-70313311	chr2	+	70312961	70313265	True	NM_006196,NR_033872	chr2,chr2	+,-	PCBP1,LOC400960	1319,932
chr2:58690911-58692708	chr2	+	58691434	58692412	True	NR_033873,NM_018062	chr2,chr2	+,-	FLJ30838,FANCL	55475,-222919
chr22:25160158-25160376	chr22	+	25160165	25160425	True	NM_001008496,NR_001283	chr22,chr22	-,+	PIWIL3,TOP1P2	10308,42
chr10:81892618-81893022	chr10	+	81892720	81892823	True	NM_001012973,NR_027432	chr10,chr10	+,-	PLAC9,LOC219347	-515,-53771
chr10:71025445-71025789	chr10	+	71025516	71025804	True	NM_001057,NM_033497,NM_033500,NM_033498	chr10,chr10,chr10,chr10	-,+,+,+	TACR2,HK1,HK1,HK1	150920,3951,3951,3951
chr6:109462192-109463986	chr6	+	109462320	109464003	True	NM_014454,NM_173830	chr6,chr6	-,+	SESN1,CEP57L1	-46612,-11864
chr18:19191890-19192207	chr18	+	19192056	19192172	True	NM_006938,NM_052911	chr18,chr18	+,-	SNRPD1,ESCO1	87,-11363
chr1:157043402-157043740	chr1	+	157043453	157043665	True	NM_001004341,NR_001560	chr1,chr1	-,+	ETV3L,CYCSP52	25989,54488
chr15:70394064-70394513	chr15	+	70394134	70394562	True	NM_020908,NM_001105192,NM_005078,NR_026764	chr15,chr15,chr15,chr15	-,-,-,+	TLE3,TLE3,TLE3,C15orf50	-3878,-3878,-3878,-266612
chrX:40947395-40948043	chrX	+	40947483	40947891	True	NM_001039591,NM_001039590,NR_027761	chrX,chrX,chrX	+,+,-	USP9X,USP9X,LOC100132831	-2656,-2656,-255034
chr12:60165040-60165807	chr12	+	60165048	60165821	True	NM_004731,NM_153377	chr12,chr12	+,-	SLC16A7,LRIG3	-81973,-850786
chr6:167536225-167536669	chr6	+	167536227	167536665	True	NM_005299,NM_031409	chr6,chr6	-,+	GPR31,CCR6	34704,-37
chr19:41304484-41304851	chr19	+	41304493	41304669	True	NM_053046,NM_198476,NM_080732	chr19,chr19,chr19	+,-,+	EGLN2,C19orf54,EGLN2	664,-48665,378
chr3:134202943-134203406	chr3	+	134203273	134203455	True	NM_025180,NM_001042400,NM_001042384,NM_015391,NM_001042383,NR_024400,NR_024401	chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,-,+,-,-	CEP63,CEP63,CEP63,ANAPC13,CEP63,ANAPC13,ANAPC13	1591,1441,1119,1458,1119,1460,1426
chr3:150420356-150421645	chr3	+	150420369	150421475	True	NM_016275,NM_152394	chr3,chr3	+,-	SELT,FAM194A	-99354,317
chr19:7502620-7503387	chr19	+	7502812	7502876	True	NR_024491,NM_001130955	chr19,chr19	-,+	LOC100128573,ARHGEF18	35425,1697
chr9:101570743-101571129	chr9	+	101570751	101571177	True	NM_173551,NM_024642	chr9,chr9	-,+	ANKS6,GALNT12	-11957,-821
chr17:74464328-74464951	chr17	+	74464338	74465000	True	NM_022066,NM_001088	chr17,chr17	-,+	UBE2O,AANAT	-15050,-759
chr14:68099830-68100442	chr14	+	68100046	68100370	True	NM_001172,NM_004569	chr14,chr14	+,-	ARG2,PIGH	-13526,-33029
chr21:44076140-44076553	chr21	+	44076151	44076591	True	NM_001001585,NM_001001584,NM_001001574,NM_080860,NM_002606,NM_001001578,NM_001001579,NM_001001569,NM_001001568,NM_001001581,NM_001001580,NM_001001583,NM_001001582,NM_001001570,NM_001001571,NM_001001572,NM_001001573,NM_001001567,NM_001001575,NM_001001576,NM_001001577	chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21	+,+,+,-,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+	PDE9A,PDE9A,PDE9A,RSPH1,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A	-2340,-2340,-2340,-159750,-2340,-2340,-2340,-2340,-2340,-2340,-2340,-2340,-2340,-2340,-2340,-2340,-2340,-2340,-2340,-2340,-2340
chr21:44313699-44314038	chr21	+	44313902	44314039	True	NM_018669,NM_021075,NM_001001503	chr21,chr21,chr21	-,+,+	WDR4,NDUFV3,NDUFV3	-14224,-575,-575
chr4:292187-293643	chr4	+	292221	293124	True	NM_001137608,NM_003441	chr4,chr4	-,+	ZNF732,ZNF141	-2277,38471
chr7:140102892-140103382	chr7	+	140103277	140103345	True	NM_001008749,NM_032295,NM_207113	chr7,chr7,chr7	+,-,-	RAB19,SLC37A3,SLC37A3	497,-4966,-4966
chr22:37581966-37582699	chr22	+	37582102	37582529	True	NM_013385,NM_182486,NM_031910	chr22,chr22,chr22	+,-,-	CYTH4,C1QTNF6,C1QTNF6	95965,1858,1858
chr14:89262414-89264326	chr14	+	89263474	89264188	True	NM_183387,NM_144596	chr14,chr14	-,+	EML5,TTC8	-4378,26789
chr12:58002889-58003194	chr12	+	58002892	58003160	True	NM_001111270,NM_182947,NM_001478,NM_178502	chr12,chr12,chr12,chr12	+,+,-,+	ARHGEF25,ARHGEF25,B4GALNT1,DTX3	802,2057,23875,-4339
chr17:5034394-5034674	chr17	+	5034531	5034721	True	NM_014519,NM_004505	chr17,chr17	-,+	ZNF232,USP6	-8134,-2895
chr10:70713645-70714026	chr10	+	70713805	70713873	True	NM_004728,NM_152707	chr10,chr10	+,-	DDX21,SLC25A16	2018,-426525
chr11:18748604-18750043	chr11	+	18748797	18749707	True	NM_153347,NM_173588	chr11,chr11	+,-	TMEM86A,IGSF22	-28497,-1020
chr2:8823740-8825080	chr2	+	8823747	8825073	True	NM_020738,NM_002166	chr2,chr2	-,+	KIDINS220,ID2	152732,-1685
chr20:25036552-25037506	chr20	+	25036639	25037433	True	NM_003650,NM_032501	chr20,chr20	+,-	CST7,ACSS1	-106833,2233
chr5:156381720-156382521	chr5	+	156381753	156382394	True	NM_138379,NM_001146726,NR_028472	chr5,chr5,chr5	-,-,+	TIMD4,TIMD4,LOC100286948	7931,7931,-30711
chr4:89622994-89624097	chr4	+	89623382	89624130	True	NR_002806,NM_153757	chr4,chr4	+,-	FAM13AOS,NAP1L5	6809,-4359
chr1:59042334-59042679	chr1	+	59042382	59042648	True	NM_002353,NR_034014	chr1,chr1	-,+	TACSTD2,LOC100131060	568,208174
chr5:49960187-49962153	chr5	+	49960299	49962067	True	NM_024615,NM_198449,NM_001178055,NM_001178056	chr5,chr5,chr5,chr5	+,-,+,+	PARP8,EMB,PARP8,PARP8	704,-223065,137,704
chrY:23758773-23759184	chrY	+	23758834	23759199	True	NM_001006120,NR_001537	chrY,chrY	+,-	RBMY1D,TTTY13	-62080,-2282
chr18:74239714-74239947	chr18	+	74239717	74239993	True	NR_015417,NM_014643	chr18,chr18	+,-	LOC284276,ZNF516	618,-32571
chr8:37605715-37606255	chr8	+	37605769	37606179	True	NR_003671,NM_001003790	chr8,chr8	-,+	LOC728024,ERLIN2	-205,-11625
chr5:175109905-175110376	chr5	+	175109937	175110416	True	NM_022304,NM_000794	chr5,chr5	+,-	HRH2,DRD1	-1524,-238774
chr19:55874498-55874698	chr19	+	55874505	55874703	True	NM_000641,NM_144613,NM_001145402,NM_139172	chr19,chr19,chr19,chr19	-,-,-,+	IL11,COX6B2,FAM71E2,TMEM190	7161,-8323,-33,13500
chr10:17242403-17243503	chr10	+	17242503	17243321	True	NM_003380,NM_004412	chr10,chr10	+,-	VIM,TRDMT1	26936,799
chr7:129286135-129286968	chr7	+	129286391	129286856	True	NM_001040110,NR_029614	chr7,chr7	+,-	NRF1,MIR182	-16523,123533
chr12:2113134-2113365	chr12	+	2113157	2113237	True	NM_000719,NM_152640	chr12,chr12	+,-	CACNA1C,DCP1B	49178,490
chr9:135994522-135994739	chr9	+	135994592	135994761	True	NR_001275,NM_006266	chr9,chr9	+,-	CELP,RALGDS	-36717,1850
chr9:136279231-136279995	chr9	+	136279391	136279915	True	NR_024514,NM_139025,NM_139026,NM_139027,NM_020385	chr9,chr9,chr9,chr9,chr9	+,+,+,+,-	ADAMTS13,ADAMTS13,ADAMTS13,ADAMTS13,REXO4	17,7204,7204,7204,3299
chr4:49275632-49277260	chr4	+	49276915	49276991	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-288709,-368100
chr4:49275632-49277260	chr4	-	49337303	49337379	False	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-349089,-428488
chr4:49275632-49277260	chr4	-	49522317	49522393	False	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-534103,-613502
chr12:80498643-80499555	chr12	+	80498999	80499484	True	NM_001143885,NM_173591	chr12,chr12	-,+	PPP1R12A,OTOGL	-169764,103748
chr14:55603460-55604371	chr14	+	55603619	55604272	True	NM_002306,NR_003225,NM_001146015,NM_001177388	chr14,chr14,chr14,chr14	+,+,-,+	LGALS3,LGALS3,DLGAP5,LGALS3	-7735,31,54174,-7735
chr10:42857932-42859278	chr10	+	42858034	42859206	True	NR_024380,NR_026827	chr10,chr10	-,+	LOC441666,LOC84856	4337,111732
chr11:60421436-60422327	chr11	+	60421436	60422178	True	NR_026946,NM_004778	chr11,chr11	+,-	C11orf64,GPR44	-38265,201322
chr19:55549755-55550252	chr19	+	55549765	55549921	True	NM_001083899,NM_133180,NM_016363	chr19,chr19,chr19	-,+,-	GP6,EPS8L1,GP6	-133,37299,-133
chr8:63996829-63998235	chr8	+	63996911	63998153	True	NM_152758,NM_000370	chr8,chr8	+,-	YTHDF3,TTPA	82967,510
chr19:55586846-55587134	chr19	+	55586851	55587083	True	NM_133180,NM_138412,NM_017729	chr19,chr19,chr19	+,-,+	EPS8L1,RDH13,EPS8L1	137,-5937,4676
chr13:75814602-75815460	chr13	+	75814694	75815240	True	NR_027466,NM_006002	chr13,chr13	-,+	CTAGE11P,UCHL3	-177,308686
chr9:35905641-35906273	chr9	+	35905708	35905960	True	NR_024283,NM_001004487,NM_001039792	chr9,chr9,chr9	+,-,+	LOC158376,OR13J1,HRCT1	3519,-35310,228
chr19:29379403-29379697	chr19	+	29379535	29379727	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	76310,324459
chr1:38020179-38020925	chr1	+	38020406	38020901	True	NM_024700,NM_003462	chr1,chr1	-,+	SNIP1,DNALI1	-503,1618
chrX:13400041-13400758	chrX	+	13400052	13400792	True	NM_001167890,NM_001135995	chrX,chrX	+,-	EGFL6,ATXN3L	186901,-61534
chr20:25666218-25667465	chr20	+	25666253	25667453	True	NM_021067,NM_015655	chr20,chr20	+,-	GINS1,ZNF337	-277981,10066
chr6:158735559-158736294	chr6	+	158735620	158736063	True	NM_001007466,NM_020245,NM_032861	chr6,chr6,chr6	+,+,-	TULP4,TULP4,SERAC1	-1986,-1986,-146308
chr14:102419943-102420693	chr14	+	102419958	102420410	True	NM_001376,NM_005348	chr14,chr14	+,-	DYNC1H1,HSP90AA1	10454,133152
chr17:47574809-47575044	chr17	+	47574950	47575092	True	NM_002634,NM_002507	chr17,chr17	-,+	PHB,NGFR	-82708,-2346
chrX:33231262-33233171	chrX	+	33231372	33232339	True	NM_004006,NM_152631	chrX,chrX	-,+	DMD,FAM47B	-1699,1728573
chr6:126068951-126069306	chr6	+	126069143	126069307	True	NM_016063,NM_012259	chr6,chr6	-,+	HDDC2,HEY2	-445861,1424
chr2:40706205-40706799	chr2	+	40706205	40706820	True	NM_001112802,NM_152390	chr2,chr2	-,+	SLC8A1,TMEM178	32810,-813223
chr20:32252096-32252519	chr20	+	32252097	32252501	True	NM_080825,NM_031231,NM_031232,NM_001024675	chr20,chr20,chr20,chr20	+,-,-,+	C20orf144,NECAB3,NECAB3,C20orf134	-2056,9813,9813,1802
chr16:700202-700559	chr16	+	700247	700607	True	NM_138418,NM_032366,NM_145294	chr16,chr16,chr16	+,-,+	FAM195A,C16orf13,WDR90	-8449,-13900,-935
chr20:9076140-9077831	chr20	+	9076453	9077584	True	NM_001172646,NM_020341	chr20,chr20	+,-	PLCB4,PAK7	-26803,742160
chr11:119215254-119215497	chr11	+	119215325	119215455	True	NM_015645,NM_032015,NM_031433	chr11,chr11,chr11	-,+,-	C1QTNF5,RNF26,MFRP	1978,-10139,1978
chr19:4233140-4234738	chr19	+	4233263	4234695	True	NM_005755,NM_016539	chr19,chr19	+,-	EBI3,SIRT6	-3774,-50667
chr18:21579583-21579990	chr18	+	21579590	21579983	True	NM_153211,NM_018030	chr18,chr18	+,-	TTC39C,OSBPL1A	-6904,272263
chr7:100464047-100464551	chr7	+	100464074	100464344	True	NM_001015072,NM_003302,NM_001128853,NM_001128852,NM_015908,NM_001128854	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,+,+	UFSP1,TRIP6,SRRT,SRRT,SRRT,SRRT	23045,605,8356,8356,8356,8356
chr20:1162424-1163007	chr20	+	1162501	1162961	True	NM_018354,NM_001009612	chr20,chr20	-,+	C20orf46,C20orf202	2206,21136
chr12:2922747-2923715	chr12	+	2922879	2923719	True	NM_018463,NM_031474	chr12,chr12	+,-	ITFG2,NRIP2	-1143,20553
chr19:7582041-7582330	chr19	+	7582123	7582332	True	NM_018083,NM_080662,NM_020533	chr19,chr19,chr19	+,-,+	ZNF358,PEX11G,MCOLN1	-1170,-28218,5163
chr1:40725477-40726026	chr1	+	40725573	40726073	True	NM_005857,NM_001852	chr1,chr1	+,-	ZMPSTE24,COL9A2	-1901,56916
chr18:56528061-56528685	chr18	+	56528092	56528713	True	NM_018181,NM_052947	chr18,chr18	+,-	ZNF532,ALPK2	1347,-231903
chr16:57443239-57443885	chr16	+	57443254	57443882	True	NM_020313,NM_002987	chr16,chr16	-,+	CIAPIN1,CCL17	37537,-4626
chr3:125484295-125485236	chr3	+	125484634	125485036	True	NR_024250,NR_031687	chr3,chr3	+,-	LOC100125556,MIR548I1	150407,24409
chr9:6018471-6019217	chr9	+	6018554	6018772	True	NR_024095,NR_024094,NM_012416,NM_005511	chr9,chr9,chr9,chr9	-,-,-,+	RANBP6,RANBP6,RANBP6,MLANA	-2914,-2914,-2936,-127700
chr2:26468362-26469298	chr2	+	26468414	26469094	True	NM_000182,NM_000183	chr2,chr2	-,+	HADHA,HADHB	-820,-850
chr3:131100923-131101124	chr3	+	131100929	131101117	True	NR_033268,NM_001171905,NM_001171906,NR_002985,NM_152395	chr3,chr3,chr3,chr3,chr3	+,+,+,-,+	NUDT16,NUDT16,NUDT16,SNORA58,NUDT16	-355,-465,-371,97010,-371
chr10:99347862-99348835	chr10	+	99348331	99348833	True	NM_001009997,NM_178832,NM_001134670,NM_138413	chr10,chr10,chr10,chr10	+,-,+,+	C10orf62,MORN4,HOGA1,HOGA1	616,44561,-4287,-4287
chr7:45021376-45022041	chr7	+	45021397	45021553	True	NR_002952,NR_003697,NM_033054,NR_030770	chr7,chr7,chr7,chr7	-,-,-,+	SNORA9,C7orf40,MYO1G,CCM2	3606,4756,-2693,17791
chr3:138318053-138318632	chr3	+	138318242	138318328	True	NM_001033030,NM_001033031,NM_001033032,NM_024491,NM_018147	chr3,chr3,chr3,chr3,chr3	+,+,+,-,+	FAIM,FAIM,FAIM,CEP70,FAIM	9213,9213,9213,-5113,9590
chr14:65289680-65289919	chr14	+	65289685	65289835	True	NM_001204063,NM_000347,NM_001024858	chr14,chr14,chr14	+,-,-	CHURC1,SPTB,SPTB	91243,81,81
chr10:81792797-81794728	chr10	+	81793074	81794668	True	NR_027428,NM_025125	chr10,chr10	-,+	LOC219347,C10orf57	44331,43757
chr10:81792797-81794728	chr10	+	81787238	81787288	False	NR_027428,NM_025125	chr10,chr10	-,+	LOC219347,C10orf57	51711,51137
chr17:29419301-29420713	chr17	+	29419424	29420204	True	NM_001128147,NM_001042492,NM_000267,NM_024683	chr17,chr17,chr17,chr17	+,+,+,-	NF1,NF1,NF1,C17orf42	1740,1740,1740,-186138
chr2:133016183-133016451	chr2	+	133016280	133016432	True	NR_031608,NM_001508,NR_027020	chr2,chr2,chr2	-,+,-	MIR663B,GPR39,ANKRD30BL	-1627,157714,-738
chr9:19302770-19304273	chr9	+	19302791	19303790	True	NM_001010,NM_017925	chr9,chr9	-,+	RPS6,DENND4C	76503,-12093
chr22:29997807-29998058	chr22	+	29997806	29997991	True	NM_016418,NM_003634,NM_181825,NM_181832,NM_181833,NM_181830,NM_181831,NM_000268,NM_181829,NM_181828	chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22	+,-,+,+,+,+,+,+,+,+	NF2,NIPSNAP1,NF2,NF2,NF2,NF2,NF2,NF2,NF2,NF2	1553,-20480,1553,1553,1553,1553,1553,1553,1553,1553
chr3:114868212-114869028	chr3	+	114868454	114868893	True	NM_001130064,NM_015642	chr3,chr3	+,-	GAP43,ZBTB20	473257,-2327
chr19:51356059-51356927	chr19	+	51356116	51356713	True	NM_138564,NM_001030047,NM_001030048,NM_001648,NM_001030050	chr19,chr19,chr19,chr19,chr19	-,+,+,+,+	KLK15,KLK3,KLK3,KLK3,KLK3	-21337,1457,1457,1457,1457
chr16:19532564-19532861	chr16	+	19532564	19532892	True	NM_001199022,NM_014711,NM_016641	chr16,chr16,chr16	+,+,-	CP110,CP110,GDE1	2286,2286,608
chr16:81528227-81529010	chr16	+	81528491	81529005	True	NM_001076780,NM_030629	chr16,chr16	-,+	PKD1L2,CMIP	-274516,-52
chr1:205011829-205012327	chr1	+	205011864	205012344	True	NM_203376,NM_005076	chr1,chr1	-,+	TMEM81,CNTN2	41294,-5
chr16:1362263-1362568	chr16	+	1362275	1362555	True	NM_194261,NM_194259,NM_001001410,NM_003345,NM_194260	chr16,chr16,chr16,chr16,chr16	+,+,-,+,+	UBE2I,UBE2I,C16orf42,UBE2I,UBE2I	-3146,-2688,39368,-2688,-2965
chr12:71114382-71115863	chr12	+	71114718	71115722	True	NM_130846,NM_014505	chr12,chr12	-,+	PTPRR,KCNMB4	32693,-354708
chr22:42949944-42950183	chr22	+	42949987	42950057	True	NR_002184,NM_014509	chr22,chr22	-,+	RRP7B,SERHL2	28010,-113
chr17:26656807-26657956	chr17	+	26657287	26657984	True	NM_174887,NM_021137	chr17,chr17	-,+	IFT20,TNFAIP1	4561,4563
chr1:159893959-159894298	chr1	+	159893991	159894313	True	NM_003564,NM_020125	chr1,chr1	-,+	TAGLN2,SLAMF8	1021,-97563
chr10:105129911-105130377	chr10	+	105130009	105130433	True	NM_006951,NM_032154	chr10,chr10	+,-	TAF5,PCGF6	-2349,-19118
chr12:52216318-52218095	chr12	+	52216435	52218024	True	NM_001130015,NM_001013690	chr12,chr12	+,-	ANKRD33,FIGNL2	63768,7728
chrX:100660828-100662273	chrX	+	100661226	100662190	True	NM_001032393,NM_019597,NM_000169	chrX,chrX,chrX	+,+,-	HNRNPH2,HNRNPH2,GLA	930,930,861
chr5:118964715-118965745	chr5	+	118964909	118965485	True	NM_173666,NM_182761,NM_001163991	chr5,chr5,chr5	-,+,+	DTWD2,FAM170A,FAM170A	-640669,34,34
chrX:24483238-24483440	chrX	+	24483238	24483386	True	NM_001136233,NM_005391,NM_001142386	chrX,chrX,chrX	-,+,+	FAM48B2,PDK3,PDK3	-151806,-33,-33
chr19:23582056-23582907	chr19	+	23582166	23582759	True	NR_003662,NM_003430	chr19,chr19	+,-	RPSAP58,ZNF91	363056,-3897
chr13:48606489-48606796	chr13	+	48606488	48606840	True	NM_003850,NM_018283	chr13,chr13	-,+	SUCLA2,NUDT15	-31026,4862
chrX:72351639-72352186	chrX	+	72351813	72352193	True	NR_027291,NM_001042506	chrX,chrX	-,+	NAP1L6,PABPC1L2B	-3894,-128521
chr7:143058007-143058293	chr7	+	143058064	143058191	True	NM_001010972,NM_001031690,NM_014690	chr7,chr7,chr7	+,-,-	ZYX,FAM131B,FAM131B	20168,1700,1033
chr4:160185500-160187275	chr4	+	160185650	160187134	True	NR_037459,NM_014247	chr4,chr4	-,+	MIR3688,RAPGEF2	-135604,1863
chr1:28285082-28285721	chr1	+	28285123	28285679	True	NM_002946,NM_018053	chr1,chr1	-,+	RPA2,XKR8	-43887,824
chr1:99749715-99751182	chr1	+	99750382	99751043	True	NM_014839,NM_001037317	chr1,chr1	+,-	LPPR4,LPPR5	-20587,-279933
chr16:48269585-48270946	chr16	+	48269600	48270698	True	NM_145186,NM_033151,NM_032583,NM_031490	chr16,chr16,chr16,chr16	-,-,-,+	ABCC11,ABCC11,ABCC11,LONP2	-512,-3418,-512,7512
chr11:72355602-72355891	chr11	+	72355602	72355766	True	NM_033388,NR_026572,NM_001143839	chr11,chr11,chr11	+,-,-	ATG16L2,PDE2A,PDE2A	169684,-2115,-2098
chr4:25655012-25655742	chr4	+	25655324	25655771	True	NM_015187,NM_001177998,NM_001177999,NM_006424	chr4,chr4,chr4,chr4	-,+,+,+	SEL1L3,SLC34A2,SLC34A2,SLC34A2	208889,1663,2314,1663
chr4:25532181-25533795	chr4	+	25532208	25533536	True	NM_015187,NM_001177998	chr4,chr4	-,+	SEL1L3,SLC34A2	331132,123898
chr17:44926278-44927189	chr17	+	44926353	44927209	True	NM_003396,NM_030753	chr17,chr17	+,-	WNT9B,WNT3	1758,-30271
chr12:31080296-31081560	chr12	+	31080464	31081462	True	NM_032156,NM_001080509	chr12,chr12	-,+	CAPRIN2,TSPAN11	-173016,-677
chr7:154736984-154738415	chr7	+	154737206	154738364	True	NM_007349,NR_024476	chr7,chr7	-,+	PAXIP1,LOC100132707	56368,-17030
chr19:2388128-2389162	chr19	+	2388414	2389042	True	NM_182973,NM_012458	chr19,chr19	+,-	TMPRSS9,TIMM13	741,38883
chrX:135051656-135052922	chrX	+	135051816	135052794	True	NM_173470,NM_001177651	chrX,chrX	-,+	MMGT1,SLC9A6	3390,14788
chr3:129939540-129940767	chr3	+	129939620	129940543	True	NR_027898,NR_024252	chr3,chr3	+,-	COL6A4P2,LOC729375	-8009,-109344
chr12:7059236-7059948	chr12	+	7059239	7059857	True	NM_138425,NM_080548,NM_080549,NR_003010,NM_002831	chr12,chr12,chr12,chr12,chr12	+,+,+,-,+	C12orf57,PTPN6,PTPN6,SCARNA12,PTPN6	-6087,-3550,576,16962,576
chr1:161168391-161169141	chr1	+	161168526	161169180	True	NM_004550,NM_005099,NM_001166159	chr1,chr1,chr1	+,-,+	NDUFS2,ADAMTS4,NDUFS2	60,-15,2756
chr11:925382-925601	chr11	+	925429	925607	True	NM_001142675,NM_012305	chr11,chr11	-,+	CHID1,AP2A2	-10371,233
chr15:30823523-30824705	chr15	+	30823950	30824302	True	NM_148911,NR_026858	chr15,chr15	-,+	CHRFAM7A,FAM7A1	-138086,40455
chr15:30823523-30824705	chr15	-	30726347	30726425	False	NM_148911,NR_026858	chr15,chr15	-,+	CHRFAM7A,FAM7A1	-40483,138332
chr15:30823523-30824705	chr15	-	32767734	32768086	False	NR_027470,NM_199357	chr15,chr15	-,+	FAM7A2,ARHGAP11A	-40484,139604
chr16:68483822-68484501	chr16	+	68483952	68484318	True	NM_133458,NM_018667	chr16,chr16	+,-	ZFP90,SMPD3	89342,-1543
chr12:51635559-51636263	chr12	+	51635735	51636023	True	NM_014764,NM_001136269,NM_001136268,NR_026893,NM_001136264,NM_001136267,NM_001136266	chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,+,-,+,+,+	DAZAP2,DAZAP2,DAZAP2,POU6F1,DAZAP2,DAZAP2,DAZAP2	-3278,-3278,-3278,-24258,-3278,-3278,-3278
chr15:101835559-101835817	chr15	+	101835585	101835695	True	NM_024652,NM_003090	chr15,chr15	+,-	LRRK1,SNRPA1	-376176,-125
chr5:131409632-131410625	chr5	+	131409639	131410497	True	NM_001205250,NM_000758	chr5,chr5	-,+	ACSL6,CSF2	-61878,-205
chr1:166841628-166842225	chr1	+	166842117	166842202	True	NM_017542,NM_053053	chr1,chr1	+,-	POGK,TADA1	-33444,3509
chr3:11196501-11196863	chr3	+	11196507	11196822	True	NM_001098212,NR_027102	chr3,chr3	+,-	HRH1,LOC285370	-344,-390630
chr2:9564051-9564303	chr2	+	9564214	9564352	True	NM_016207,NM_004763,NM_022334	chr2,chr2,chr2	+,-,-	CPSF3,ITGB1BP1,ITGB1BP1	-397,-571,-571
chr8:120104864-120106409	chr8	+	120105199	120106409	True	NM_002546,NM_006438	chr8,chr8	-,+	TNFRSF11B,COLEC10	-140816,-25826
chr16:54321938-54322297	chr16	+	54321974	54322264	True	NM_001080432,NM_024336	chr16,chr16	+,-	FTO,IRX3	-584150,-1596
chr11:124615583-124615977	chr11	+	124615743	124615893	True	NM_001126181,NM_006176,NM_014312	chr11,chr11,chr11	+,+,-	NRGN,NRGN,VSIG2	-5965,-5965,6266
chr2:71356529-71357021	chr2	+	71356545	71357004	True	NM_005791,NM_032601	chr2,chr2	+,-	MPHOSPH10,MCEE	439,440
chr9:113801739-113802062	chr9	+	113801750	113802104	True	NM_057159,NM_001401,NM_005592	chr9,chr9,chr9	-,-,+	LPAR1,LPAR1,MUSK	-1385,-1385,-370750
chr5:96269095-96270166	chr5	+	96269407	96270183	True	NM_001198541,NM_005575	chr5,chr5	-,+	ERAP1,LNPEP	-119559,1162
chr6:167275861-167276273	chr6	+	167275979	167276165	True	NM_007045,NM_001006932	chr6,chr6	+,-	FGFR1OP,RPS6KA2	136650,-208
chr1:12676614-12676982	chr1	+	12676619	12677028	True	NM_004753,NM_001013630	chr1,chr1	-,+	DHRS3,AADACL4	842,27537
chr3:101280898-101281172	chr3	+	101280902	101281221	True	NM_020654,NM_017819	chr3,chr3	-,+	SENP7,RG9MTD1	-48817,-241
chr16:50188636-50189240	chr16	+	50188707	50189151	True	NM_001040285,NM_001040284,NM_001173984	chr16,chr16,chr16	+,+,-	PAPD5,PAPD5,BRD7	-1929,-1929,213744
chr1:205706641-205707244	chr1	+	205706647	205707052	True	NM_022731,NM_181644	chr1,chr1	-,+	NUCKS1,MFSD4	12375,-168586
chr10:65225262-65225488	chr10	+	65225333	65225511	True	NR_027182,NM_032776	chr10,chr10	+,-	LOC84989,JMJD1C	-395,261
chr1:225615998-225616340	chr1	+	225616167	225616351	True	NM_194442,NM_002296,NM_001130440	chr1,chr1,chr1	-,-,+	LBR,LBR,SRP9	256,-352,349163
chr11:63955738-63956408	chr11	+	63956168	63956346	True	NM_006819,NM_014067	chr11,chr11	+,-	STIP1,MACROD1	-2641,-22583
chr1:209822535-209823374	chr1	+	209822551	209823392	True	NM_001127641,NM_001017402,NM_015714,NM_000228	chr1,chr1,chr1,chr1	-,-,+,-	LAMB3,LAMB3,G0S2,LAMB3	2332,1337,25277,2478
chr10:6243559-6243777	chr10	+	6243592	6243782	True	NM_004566,NM_000417	chr10,chr10	+,-	PFKFB3,IL2RA	1057,-139259
chr22:44286719-44287102	chr22	+	44286866	44287148	True	NM_001177675,NM_025225,NM_138814	chr22,chr22,chr22	-,+,-	PNPLA5,PNPLA3,PNPLA5	795,32470,795
chr5:156627538-156629015	chr5	+	156627547	156629063	True	NM_130899,NM_005546	chr5,chr5	-,+	FAM71B,ITK	-34268,-19691
chr11:124667100-124669000	chr11	+	124667601	124668987	True	NM_006176,NM_024631	chr11,chr11	+,-	NRGN,C11orf61	-57824,1362
chr2:44500063-44502055	chr2	+	44500181	44501840	True	NM_001042385,NM_000341	chr2,chr2	-,+	PREPL,SLC3A1	85112,756
chr6:27780650-27782370	chr6	+	27781067	27782154	True	NM_003536,NM_003521,NM_021066,NM_021968,NM_003509,NM_003519	chr6,chr6,chr6,chr6,chr6,chr6	+,+,-,+,+,-	HIST1H3H,HIST1H2BM,HIST1H2AJ,HIST1H4J,HIST1H2AI,HIST1H2BL	-3277,667,418,9748,-5142,-5358
chr1:149908097-149908522	chr1	+	149908289	149908371	True	NM_181873,NM_005850,NM_016074,NM_001145862	chr1,chr1,chr1,chr1	-,-,+,-	MTMR11,SF3B4,BOLA1,MTMR11	-23,-8145,-37186,470
chr16:452595-452839	chr16	+	452647	452715	True	NM_020664,NM_021259,NM_005009	chr16,chr16,chr16	+,-,+	DECR2,TMEM8A,NME4	-842,-20697,-5508
chr10:63660572-63660956	chr10	+	63660571	63660901	True	NM_032199,NM_145307	chr10,chr10	+,-	ARID5B,RTKN2	111,367623
chr22:35474754-35475884	chr22	+	35474886	35475827	True	NM_001008494,NM_005368	chr22,chr22	+,-	ISX,MB	-12808,537614
chr16:69225702-69226116	chr16	+	69225866	69226130	True	NM_006750,NR_033227	chr16,chr16	+,-	SNTB2,CHTF8	-4874,-59373
chrX:153711533-153712751	chrX	+	153711542	153712562	True	NM_001142392,NM_019848,NM_001142391,NM_014235,NM_017514,NM_006014	chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,+,-	SLC10A3,SLC10A3,SLC10A3,UBL4A,PLXNA3,LAGE3	6490,6490,6490,2420,-24970,-3946
chr17:39638220-39639375	chr17	+	39638301	39639420	True	NM_005801,NM_003771,NM_002280	chr17,chr17,chr17	+,-,-	EIF1,KRT36,KRT35	205706,6746,-909
chr3:38683542-38684588	chr3	+	38683562	38684550	True	NM_001160161,NM_001160160,NM_000335,NM_001099405,NM_001099404,NM_005107,NM_198056	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,-,+,-	SCN5A,SCN5A,SCN5A,SCN5A,SCN5A,EXOG,SCN5A	6664,6664,6663,6663,6663,-145850,6663
chr15:100272224-100272773	chr15	+	100272253	100272817	True	NM_001130928,NM_152449	chr15,chr15	+,-	MEF2A,LYSMD4	-99121,859
chr19:58219863-58220120	chr19	+	58219976	58220070	True	NM_001085384,NM_138347	chr19,chr19	-,+	ZNF154,ZNF551	559,-26670
chr1:201474762-201475944	chr1	+	201474765	201475925	True	NM_001193570,NM_001193571,NM_001193572,NR_026667,NM_004078	chr1,chr1,chr1,chr1,chr1	-,-,-,+,-	CSRP1,CSRP1,CSRP1,RPS10P7,CSRP1	512,92,-9064,13106,512
chr10:131763818-131764067	chr10	+	131763827	131764101	True	NM_001005463,NM_006541	chr10,chr10	-,+	EBF3,GLRX3	-1736,170537
chr12:114403000-114403665	chr12	+	114403230	114403681	True	NM_016196,NM_001146699,NM_001146698,NM_138432	chr12,chr12,chr12,chr12	-,-,-,+	RBM19,RBM19,RBM19,SDSL	545,545,545,-543065
chr3:101393466-101395018	chr3	+	101393955	101395010	True	NR_024407,NM_014415	chr3,chr3	+,-	LOC100009676,ZBTB11	263,1028
chr3:108033854-108034985	chr3	+	108033920	108035031	True	NM_007072,NM_018010	chr3,chr3	+,-	HHLA2,IFT57	-12639,-92503
chr14:96118919-96119350	chr14	+	96118919	96119323	True	NM_001098725,NR_028288	chr14,chr14	-,+	TCL1A,TCL6	61267,-1455
chr12:50136240-50136489	chr12	+	50136289	50136536	True	NM_001098576,NM_198900,NM_003217	chr12,chr12,chr12	+,-,+	TMBIM6,FMNL3,TMBIM6	-757,-35092,-1056
chr22:38424914-38426586	chr22	+	38425337	38426452	True	NM_001039583,NM_006941	chr22,chr22	+,-	PICK1,SOX10	26809,-44798
chr9:115773120-115774311	chr9	+	115773533	115774305	True	NM_001101338,NR_024366	chr9,chr9	-,+	ZNF883,NCRNA00256A	217,100870
chr4:4545846-4546341	chr4	+	4545915	4546329	True	NR_037888,NM_016930	chr4,chr4	+,-	LOC100507266,STX18	-2108,-2140
chrX:83443102-83444754	chrX	+	83443700	83444538	True	NM_021118,NM_014496	chrX,chrX	+,-	CYLC1,RPS6KA6	-327582,-757
chr13:49954268-49955172	chr13	+	49954267	49955002	True	NM_031915,NM_030925	chr13,chr13	+,-	SETDB2,CAB39L	63426,20794
chr10:81965443-81965980	chr10	+	81965545	81966017	True	NM_145869,NM_145868,NM_001012973,NM_001157	chr10,chr10,chr10,chr10	-,-,+,-	ANXA11,ANXA11,PLAC9,ANXA11	-217,-217,-73338,-217
chr1:247613381-247614603	chr1	+	247613845	247614543	True	NM_183395,NM_001004492	chr1,chr1	+,-	NLRP3,OR2B11	-32555,791
chr11:66444517-66444996	chr11	+	66444599	66444969	True	NM_001198844,NM_031492	chr11,chr11	+,-	RBM4,RBM4B	-38562,356
chr9:15301166-15301676	chr9	+	15301191	15301459	True	NM_001168341,NM_001168340,NM_001039697,NM_001168339,NM_152574	chr9,chr9,chr9,chr9,chr9	-,-,+,-,-	TTC39B,TTC39B,SNAPC3,TTC39B,TTC39B	5949,5949,121322,5949,5949
chr16:1128024-1128276	chr16	+	1128066	1128316	True	NM_001172560,NM_001053,NR_027242	chr16,chr16,chr16	+,+,-	SSTR5,SSTR5,LOC146336	-5361,464,465
chr1:16957873-16958720	chr1	+	16958006	16958652	True	NR_026752,NR_027504	chr1,chr1	-,+	CROCCP2,MST1P2	-605,13416
chr1:4045317-4046668	chr1	+	4045376	4046702	True	NR_024455,NM_207356	chr1,chr1	+,-	LOC100133612,C1orf174	-228459,-228519
chr20:62693376-62694290	chr20	+	62693432	62694118	True	NM_198723,NM_018419,NM_003195	chr20,chr20,chr20	+,-,+	TCEA2,SOX18,TCEA2	-5044,-12453,-109
chr11:124768812-124769359	chr11	+	124768839	124769359	True	NM_019055,NM_001037558	chr11,chr11	-,+	ROBO4,HEPN1	-1008,19786
chr17:7479792-7479996	chr17	+	7479971	7480035	True	NM_001416,NM_004870,NR_002918,NM_001040059,NR_002912,NR_024603,NR_002604,NM_001251,NM_001204510,NM_006942	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,+,+,+,+,-	EIF4A1,MPDU1,SNORA48,CD68,SNORA67,MPDU1,SNORD10,CD68,EIF4A1,SOX15	-3998,6929,-1991,2770,1237,6929,93,2769,-3998,13503
chr6:35657092-35657965	chr6	+	35657247	35657856	True	NM_004117,NM_145028,NM_001145777,NM_001145776	chr6,chr6,chr6,chr6	-,+,-,-	FKBP5,C6orf81,FKBP5,FKBP5	-528,47002,-528,-555
chr6:27099789-27100368	chr6	+	27099796	27100348	True	NM_021064,NM_003495,NM_021058	chr6,chr6,chr6	+,+,-	HIST1H2AG,HIST1H4I,HIST1H2BJ	468,6739,277
chr1:10092266-10092556	chr1	+	10092299	10092556	True	NM_001105562,NM_032368,NM_006048	chr1,chr1,chr1	+,-,+	UBE4B,LZIC,UBE4B	484,-89473,484
chr1:229697682-229698567	chr1	+	229698093	229698613	True	NM_012089,NM_014777	chr1,chr1	-,+	ABCB10,URB2	-3651,63367
chr19:32843591-32844000	chr19	+	32843592	32844040	True	NM_014910,NM_001136156,NM_032139	chr19,chr19,chr19	+,+,-	ZNF507,ZNF507,ANKRD27	-7130,-7130,322112
chr8:18243069-18243946	chr8	+	18243123	18243970	True	NM_000015,NM_004315	chr8,chr8	+,-	NAT2,ASAH1	4784,-300616
chr5:172661259-172661495	chr5	+	172661292	172661482	True	NM_004387,NM_013980,NM_001166175,NM_001166176	chr5,chr5,chr5,chr5	-,+,-,-	NKX2-5,BNIP1,NKX2-5,NKX2-5	883,-89898,883,883
chr10:74876312-74877237	chr10	+	74876506	74876986	True	NM_001142596,NM_015901	chr10,chr10	-,+	P4HA1,NUDT13	-19774,-6356
chrY:10019525-10019737	chrY	+	10019525	10019582	True	NR_003593,NR_003589	chrY,chrY	+,-	TTTY23B,TTTY1B	-271169,-407597
chr8:27952090-27953431	chr8	+	27952280	27953377	True	NM_018091,NM_001010906	chr8,chr8	+,-	ELP3,C8orf80	-1747,-10892
chr3:155356986-155357502	chr3	+	155357264	155357518	True	NM_001130960,NM_003875	chr3,chr3	-,+	PLCH1,GMPS	36637,230806
chr10:70287718-70288613	chr10	+	70288086	70288519	True	NM_030625,NM_152707	chr10,chr10	+,-	TET1,SLC25A16	31597,-806
chr2:133044684-133046241	chr2	+	133044764	133046190	True	NM_001508,NR_027020	chr2,chr2	+,-	GPR39,ANKRD30BL	127956,-29222
chr13:47470163-47470759	chr13	+	47470214	47470768	True	NM_001164213,NM_000621,NM_001165947	chr13,chr13,chr13	+,-,-	LRCH1,HTR2A,HTR2A	-342975,461,461
chr3:99793831-99794991	chr3	+	99793964	99794780	True	NM_001167924,NM_182909	chr3,chr3	+,-	C3orf26,FILIP1L	38993,38619
chr3:136472650-136473089	chr3	+	136472676	136472850	True	NM_001097599,NM_005862	chr3,chr3	+,-	TMEM22,STAG1	65010,-1431
chr1:173549581-173550380	chr1	+	173549892	173550412	True	NM_001195190,NM_178527	chr1,chr1	+,-	LOC730159,SLC9A11	54248,21871
chr5:80598010-80599154	chr5	+	80598342	80598691	True	NM_032280,NR_034122,NR_034123,NR_034121,NM_001131035,NM_001131036	chr5,chr5,chr5,chr5,chr5,chr5	+,-,-,-,+,+	ZCCHC9,LOC100131067,LOC100131067,LOC100131067,ZCCHC9,ZCCHC9	-991,-954,-954,-954,-991,-991
chr16:87983776-87984200	chr16	+	87983818	87984051	True	NM_001173542,NM_001173541,NM_001173539,NM_017869,NM_079837,NM_001173540,NM_001739	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,+,-	BANP,BANP,BANP,BANP,BANP,BANP,CA5A	9425,986,986,986,986,986,-13706
chr5:68509232-68509524	chr5	+	68509310	68509470	True	NM_033281,NM_176816	chr5,chr5	+,-	MRPS36,CCDC125	4102,106990
chr10:6621387-6621917	chr10	+	6621451	6621565	True	NR_036502,NR_036503,NM_006257	chr10,chr10,chr10	+,+,-	LOC439949,LOC439949,PRKCQ	821,821,723
chr1:45669547-45670622	chr1	+	45669642	45670650	True	NM_020883,NR_024270	chr1,chr1	-,+	ZSWIM5,LOC400752	1655,98931
chr1:156891607-156892234	chr1	+	156891651	156892283	True	NM_144702,NR_030527	chr1,chr1	+,-	LRRC71,MIR765	-1278,13803
chr19:49377906-49378122	chr19	+	49377935	49378071	True	NM_020904,NM_014330,NM_001161354	chr19,chr19,chr19	-,+,-	PLEKHA4,PPP1R15A,PLEKHA4	-6051,-2337,-6051
chr17:7083056-7083797	chr17	+	7083138	7083601	True	NM_001671,NM_000018,NM_001197216	chr17,chr17,chr17	-,+,-	ASGR1,ACADVL,ASGR1	-255,39551,-255
chr12:109745228-109746357	chr12	+	109745612	109746334	True	NM_213596,NM_001101421	chr12,chr12	-,+	FOXN4,MYO1H	741,80189
chr13:90015764-90016095	chr13	+	90015763	90015873	True	NR_030754,NR_027039	chr13,chr13	+,-	MIR622,LOC144776	867562,1563034
chr2:55494763-55495243	chr2	+	55494792	55495084	True	NM_001005369,NR_027258,NM_002453	chr2,chr2,chr2	-,+,-	MTIF2,PRORSD1P,MTIF2	1285,14370,1354
chr22:33454682-33455069	chr22	+	33454721	33454815	True	NM_000362,NM_001135774	chr22,chr22	+,-	TIMP3,SYN3	-257970,-344
chr7:127254019-127255517	chr7	+	127254064	127255478	True	NM_006193,NM_020369	chr7,chr7	-,+	PAX4,FSCN3	352,-20426
chr2:26216630-26217253	chr2	+	26216750	26217168	True	NM_002254,NM_016131	chr2,chr2	-,+	KIF3C,RAB10	-11307,39560
chr19:1956167-1956541	chr19	+	1956219	1956567	True	NR_033400,NM_001319	chr19,chr19	-,+	C19orf34,CSNK1G2	-1671,-15109
chr5:56206341-56207726	chr5	+	56206371	56207730	True	NM_153706,NM_001171990,NM_152622	chr5,chr5,chr5	+,+,-	C5orf35,C5orf35,MIER3	-1335,-1335,40281
chr2:74738213-74739330	chr2	+	74738340	74739378	True	NM_016170,NM_001009812,NM_032673,NR_024606	chr2,chr2,chr2,chr2	+,-,-,+	TLX2,LBX2,PCGF1,LOC151534	2217,-7897,-3519,-8647
chr9:127905745-127906015	chr9	+	127905871	127906053	True	NM_001144877,NM_001174152,NM_173690	chr9,chr9,chr9	-,+,-	SCAI,RABEPK,SCAI	-33,56767,-33
chr20:4228470-4229022	chr20	+	4228526	4229044	True	NM_000678,NR_033917	chr20,chr20	-,+	ADRA1D,LOC728228	665,-54840
chr16:11440275-11441080	chr16	+	11440419	11440949	True	NM_152308,NM_002761	chr16,chr16	+,-	C16orf75,PRM1	-1159,-65227
chr6:43971918-43973406	chr6	+	43971941	43973373	True	NM_001171992,NM_153246,NM_032111	chr6,chr6,chr6	+,+,-	C6orf223,C6orf223,MRPL14	-3655,-3655,121868
chr11:62475782-62476244	chr11	+	62475788	62476206	True	NM_001130702,NR_037949,NR_037948,NM_001122955,NM_012202,NM_032667	chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,+,-	BSCL2,BSCL2,BSCL2,BSCL2,GNG3,BSCL2	-2001,935,935,-609,-725,-2001
chr1:24016654-24016968	chr1	+	24016692	24016774	True	NM_001199802,NM_001127621,NM_000975	chr1,chr1,chr1	+,-,+	RPL11,GALE,RPL11	1494,109336,1494
chr9:96215189-96215552	chr9	+	96215247	96215553	True	NM_198841,NM_014612	chr9,chr9	-,+	FAM120AOS,FAM120A	371,-1125
chr10:1095048-1095284	chr10	+	1095152	1095264	True	NM_004508,NM_014023	chr10,chr10	-,+	IDI1,WDR37	-91,7511
chr4:6696851-6697473	chr4	+	6696978	6697519	True	NM_005980,NM_203462	chr4,chr4	+,-	S100P,MRFAP1L1	-1468,14137
chr4:91253680-91254444	chr4	+	91253706	91254472	True	NM_001146055,NM_207491	chr4,chr4	-,+	SNCA,FAM190A	-494259,-97582
chr19:20187743-20188584	chr19	+	20187775	20188617	True	NM_033196,NM_007138	chr19,chr19	-,+	ZNF682,ZNF90	-37498,185
chr3:126245906-126246371	chr3	+	126245962	126246358	True	NM_144639,NM_001165974,NM_152889	chr3,chr3,chr3	-,-,+	UROC1,UROC1,CHST13	-9346,-9346,-2837
chr7:31094365-31094859	chr7	+	31094557	31094859	True	NM_022728,NM_001199635,NM_001199637,NM_001118,NM_001199636	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	NEUROD6,ADCYAP1R1,ADCYAP1R1,ADCYAP1R1,ADCYAP1R1	285729,-2532,-2532,-2532,-2532
chr10:121651558-121651882	chr10	+	121651748	121651922	True	NM_024834,NM_007190,NR_037771	chr10,chr10,chr10	-,+,+	MCMBP,SEC23IP,SEC23IP	-19354,162,162
chr4:154080235-154080611	chr4	+	154080320	154080398	True	NM_001130067,NR_001562	chr4,chr4	+,-	TRIM2,ANXA2P1	-6109,149615
chr6:6007462-6007782	chr6	+	6007629	6007701	True	NM_016588,NM_004271	chr6,chr6	-,+	NRN1,LY86	0,581232
chr7:123298832-123299201	chr7	+	123298848	123299233	True	NM_207163,NM_003941	chr7,chr7	+,-	LMOD2,WASL	-3040,89934
chr19:4968305-4968572	chr19	+	4968318	4968602	True	NM_015015,NM_001080523	chr19,chr19	+,-	KDM4B,ARRDC5	521,-65439
chr9:139555708-139556040	chr9	+	139555840	139556070	True	NM_201446,NM_016215,NR_029695,NM_001012727	chr9,chr9,chr9,chr9	+,+,+,-	EGFL7,EGFL7,MIR126,AGPAT2	1306,1311,8983,25891
chr17:39888473-39889599	chr17	+	39888503	39889157	True	NM_000805,NM_177977,NM_001079870,NM_001079871	chr17,chr17,chr17,chr17	+,-,-,-	GAST,HAP1,HAP1,HAP1	-19941,1791,1791,1791
chr6:127837671-127839534	chr6	+	127837758	127839572	True	NM_001010905,NM_001012279	chr6,chr6	+,-	C6orf58,C6orf174	58746,978
chr3:129118659-129120029	chr3	+	129118662	129119779	True	NR_003111,NM_018262,NR_002992	chr3,chr3,chr3	-,+,-	RPL32P3,IFT122,SNORA7B	-380,39188,-2471
chr13:31197760-31198645	chr13	+	31197765	31198428	True	NM_005800,NM_002128	chr13,chr13	+,-	USPL1,HMGB1	-5986,-157684
chr2:39344623-39346187	chr2	+	39344864	39346035	True	NM_005633,NM_001145451	chr2,chr2	-,+	SOS1,ARHGEF33	1622,-198412
chr9:115648919-115649569	chr9	+	115649322	115649616	True	NM_001012994,NM_033051	chr9,chr9	+,-	SNX30,SLC46A2	-136239,3627
chr18:2577762-2579719	chr18	+	2577793	2579391	True	NM_006101,NM_022840	chr18,chr18	+,-	NDC80,METTL4	-6337,-6304
chr7:108202352-108203788	chr7	+	108202353	108203659	True	NM_001130475,NM_182529,NM_012328	chr7,chr7,chr7	-,-,+	THAP5,THAP5,DNAJB9	6559,6289,6529
chr1:86862059-86862341	chr1	+	86862114	86862359	True	NM_001184765,NM_001184766,NM_006536,NM_020729,NM_001007022	chr1,chr1,chr1,chr1,chr1	-,-,+,-,-	ODF2L,ODF2L,CLCA2,ODF2L,ODF2L	-89,-89,27409,-89,-89
chr10:68711286-68713119	chr10	+	68711775	68712941	True	NM_001127384,NM_178011	chr10,chr10	-,+	CTNNA3,LRRTM3	712525,-26035
chr2:153610508-153611804	chr2	+	153610637	153611799	True	NR_024526,NM_017892	chr2,chr2	+,-	ARL6IP6,PRPF40A	-36278,-36662
chr12:112572107-112573855	chr12	+	112572356	112573633	True	NM_001143906,NM_024953,NM_006700	chr12,chr12,chr12	+,-,+	TRAFD1,NAA25,TRAFD1	-9065,-25721,-9065
chr8:143782948-143783318	chr8	+	143782949	143783215	True	NM_017527,NM_003724,NM_001160354,NM_001160355	chr8,chr8,chr8,chr8	+,-,+,+	LY6K,JRK,LY6K,LY6K	-1471,-31548,-1471,-1471
chr5:178990966-178992270	chr5	+	178990985	178992100	True	NM_005520,NM_001040451,NM_001040452	chr5,chr5,chr5	-,+,+	HNRNPH1,RUFY1,RUFY1	58677,-4304,-4304
chr15:30489670-30491409	chr15	+	30489904	30491439	True	NR_026771,NM_139320	chr15,chr15	+,-	DKFZP434L187,CHRFAM7A	-1717,194475
chr15:30489670-30491409	chr15	-	32631656	32633191	False	NR_026859,NM_199357	chr15,chr15	-,+	FAM7A3,ARHGAP11A	93925,274499
chr13:103426927-103427701	chr13	+	103426929	103427705	True	NM_001159596,NM_138779	chr13,chr13	+,-	BIVM,C13orf27	23693,-780
chr20:30168188-30169622	chr20	+	30168498	30169601	True	NM_001037500,NM_002165	chr20,chr20	-,+	DEFB124,ID1	-107682,23490
chr1:110149995-110150523	chr1	+	110150166	110150579	True	NM_005272,NR_029583	chr1,chr1	-,+	GNAT2,MIR197	5185,-8709
chr22:50985953-50986662	chr22	+	50986006	50986116	True	NM_138433,NM_001014440	chr22,chr22	+,-	KLHDC7B,ODF3B	345,-14998
chr20:24914853-24915886	chr20	+	24914878	24915802	True	NM_003650,NM_020531	chr20,chr20	+,-	CST7,C20orf3	14063,57673
chr11:3184613-3184883	chr11	+	3184645	3184855	True	NM_001144063,NM_020896,NM_145638,NR_027138	chr11,chr11,chr11,chr11	-,-,-,+	OSBPL5,OSBPL5,OSBPL5,C11orf36	1777,1777,1777,54706
chr16:2266751-2267289	chr16	+	2266753	2267258	True	NM_004424,NM_182563,NM_001042371	chr16,chr16,chr16	+,-,-	E4F1,C16orf79,PGP	6308,-5684,-1931
chrX:32173314-32174419	chrX	+	32173468	32174072	True	NM_004021,NM_004020,NM_004023,NM_004022,NM_203391,NM_004013	chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,+,-	DMD,DMD,DMD,DMD,GK,DMD	-18,-18,-18,-18,-1502043,-18
chr16:1291011-1291334	chr16	+	1291209	1291339	True	NM_024164,NM_003294	chr16,chr16	-,+	TPSB2,TPSAB1	-11024,-582
chr16:1291011-1291334	chr16	-	1279552	1279602	False	NM_012467,NM_024164,NM_003294	chr16,chr16,chr16	-,-,+	TPSG1,TPSB2,TPSAB1	-4298,633,11075
chrX:51076047-51077891	chrX	+	51076295	51077523	True	NM_018159,NM_153183	chrX,chrX	-,+	NUDT11,NUDT10	161986,-1263
chr22:19130572-19131223	chr22	+	19130776	19131060	True	NM_005315,NM_053006,NM_022719	chr22,chr22,chr22	-,+,-	GSC2,TSSK2,DGCR14	6786,-12506,1180
chr20:62286572-62287671	chr20	+	62286665	62287542	True	NM_015894,NM_016434,NR_037882,NM_032957	chr20,chr20,chr20,chr20	-,+,+,+	STMN3,RTEL1,RTEL1-TNFRSF6B,RTEL1	-1885,1620,1620,1620
chr1:19230867-19231366	chr1	+	19231066	19231190	True	NM_170726,NM_001135254,NM_003748	chr1,chr1,chr1	-,+,-	ALDH4A1,PAX7,ALDH4A1	-1773,-273617,-1773
chr3:15241681-15243342	chr3	+	15241878	15243184	True	NR_027927,NM_014296	chr3,chr3	-,+	COL6A4P1,CAPN7	4332,4548
chr10:102820369-102820594	chr10	+	102820394	102820610	True	NM_024895,NM_030929	chr10,chr10	-,+	PDZD7,KAZALD1	-29480,388
chr6:97372311-97372511	chr6	+	97372374	97372440	True	NM_014165,NM_052904	chr6,chr6	-,+	NDUFAF4,KLHL32	-26607,55
chr17:61934266-61934521	chr17	+	61934496	61934570	True	NM_001098426,NR_002947	chr17,chr17	-,+	SMARCD2,TCAM1P	-14145,-171
chr7:93201179-93201842	chr7	+	93201233	93201853	True	NM_001164737,NM_001742,NM_021955	chr7,chr7,chr7	-,-,+	CALCR,CALCR,GNGT1	2249,2249,333966
chr17:19281688-19281899	chr17	+	19281808	19281940	True	NM_001198695,NM_002749,NM_002404,NM_139033,NM_139032,NM_139034	chr17,chr17,chr17,chr17,chr17,chr17	-,+,-,+,+,+	MFAP4,MAPK7,MFAP4,MAPK7,MAPK7,MAPK7	8642,-85,8642,-825,-825,-85
chr17:7835410-7836032	chr17	+	7835449	7836025	True	NM_053051,NR_030697,NM_001166621,NR_030684,NM_004732,NM_001037144,NM_021210	chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,-,-,+,-	CNTROB,TRAPPC1,TRAPPC1,TRAPPC1,KCNAB3,CNTROB,TRAPPC1	-27,-132,-132,-182,-2696,-27,-182
chr17:53852175-53854126	chr17	+	53852490	53854095	True	NM_001102402,NM_001099640	chr17,chr17	+,-	PCTP,TMEM100	-24082,-43008
chr3:196434195-196435542	chr3	+	196434354	196435556	True	NM_017861,NM_032898,NM_001166304	chr3,chr3,chr3	+,-,+	PIGX,C3orf34,PIGX	3688,3617,3688
chr2:60981934-60983200	chr2	+	60982620	60983230	True	NM_022894,NR_033980	chr2,chr2	+,-	PAPOLG,FLJ16341	134,125269
chr1:41949170-41949377	chr1	+	41949185	41949350	True	NM_001956,NR_037868	chr1,chr1	-,+	EDN2,LOC100507178	1045,-468974
chr15:83377547-83378053	chr15	+	83377632	83378101	True	NR_034139,NM_004644,NR_003011	chr15,chr15,chr15	-,-,+	LOC338963,AP3B2,SCARNA15	4694,584,46595
chr2:241511351-241512161	chr2	+	241511423	241511985	True	NM_017844,NM_018226	chr2,chr2	-,+	ANKMY1,RNPEPL1	-14018,-3470
chr4:83934393-83935720	chr4	+	83934476	83935298	True	NM_194282,NM_001115008,NM_001115007,NM_016129	chr4,chr4,chr4,chr4	-,-,-,+	LIN54,LIN54,LIN54,COPS4	-2494,-2494,-436,20940
chr16:85624378-85625280	chr16	+	85624658	85625318	True	NM_001134473,NM_016095	chr16,chr16	+,-	KIAA0182,GINS2	19710,97320
chr1:47778047-47778918	chr1	+	47778151	47778639	True	NM_001136140,NM_001048166,NM_003035	chr1,chr1,chr1	+,-,-	CMPK1,STIL,STIL	20829,1230,1230
chr1:167685842-167686308	chr1	+	167686153	167686252	True	NM_003851,NM_024569,NM_001146191,NM_003953	chr1,chr1,chr1,chr1	-,+,+,+	CREG1,MPZL1,MPZL1,MPZL1	-163097,4934,4934,4934
chr1:154908648-154909099	chr1	+	154908769	154909131	True	NM_001826,NM_006556	chr1,chr1	+,-	CKS1B,PMVK	37986,403
chr20:1631291-1632284	chr20	+	1631398	1632238	True	NM_018556,NM_080816,NM_001039508,NM_001040022	chr20,chr20,chr20,chr20	-,-,-,+	SIRPG,SIRPG,SIRPG,SIRPA	6237,6237,6237,242574
chr17:42838464-42838968	chr17	+	42838578	42838994	True	NM_005497,NM_002390	chr17,chr17	-,+	GJC1,ADAM11	68663,-2061
chr2:223162202-223162664	chr2	+	223162213	223162713	True	NM_013942,NM_153038,NM_181458,NM_001127366,NM_181459,NM_181457,NM_000438,NM_181461,NM_181460	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	-,+,-,-,-,-,-,-,-	PAX3,CCDC140,PAX3,PAX3,PAX3,PAX3,PAX3,PAX3,PAX3	1052,152,1052,1052,1052,1052,1052,1052,1052
chr5:892967-893210	chr5	+	892967	893239	True	NM_004237,NR_027633,NM_001009877,NM_023924,NM_001166260	chr5,chr5,chr5,chr5,chr5	+,-,-,-,+	TRIP13,BRD9,BRD9,BRD9,TRIP13	-49,-28,-293,-28,-49
chr11:113931051-113931261	chr11	+	113931106	113931292	True	NM_020886,NM_001018011,NM_006006	chr11,chr11,chr11	-,+,+	USP28,ZBTB16,ZBTB16	-184850,-5,-726
chr8:93049829-93050400	chr8	+	93049936	93050228	True	NM_175636,NM_052832	chr8,chr8	-,+	RUNX1T1,SLC26A7	-20028,-788478
chr2:99067527-99067942	chr2	+	99067597	99067971	True	NM_001008215,NM_001134225,NM_001134224,NM_001566,NM_004027	chr2,chr2,chr2,chr2,chr2	-,+,+,+,+	C2orf64,INPP4A,INPP4A,INPP4A,INPP4A	157034,-6327,-6327,-6327,-6327
chrX:84189078-84189278	chrX	+	84189077	84189323	True	NR_024062,NM_001012980	chrX,chrX	+,-	UBE2DNL,SATL1	29,174701
chr3:178969801-178970610	chr3	+	178969884	178970429	True	NM_016331,NR_028135,NM_171829,NM_171830,NM_014407	chr3,chr3,chr3,chr3,chr3	+,-,-,-,-	ZNF639,KCNMB3,KCNMB3,KCNMB3,KCNMB3	71121,7302,7302,-239,-481
chr12:39274934-39276226	chr12	+	39275050	39276266	True	NM_001013620,NM_153634	chr12,chr12	+,-	ALG10B,CPNE8	-564551,23204
chr12:107474528-107476109	chr12	+	107474629	107475718	True	NM_004075,NM_152261	chr12,chr12	-,+	CRY1,C12orf23	11931,-125145
chr7:129694623-129695854	chr7	+	129694636	129695410	True	NM_016478,NM_014997	chr7,chr7	-,+	ZC3HC1,KLHDC10	-3403,14938
chr2:242715083-242715413	chr2	+	242715106	242715398	True	NM_005018,NM_022134	chr2,chr2	-,+	PDCD1,GAL3ST2	85710,841
chr10:91463357-91463668	chr10	+	91463401	91463497	True	NR_026835,NM_016195	chr10,chr10	-,+	FLJ37201,KIF20B	-5716,-2094
chr2:241397541-241398546	chr2	+	241397546	241398554	True	NR_024014,NR_029702	chr2,chr2	-,+	PP14571,MIR149	-1429,-2179
chr12:5602398-5602667	chr12	+	5602420	5602640	True	NM_020373,NM_002527	chr12,chr12	-,+	ANO2,NTF3	452808,657
chr3:111321557-111322145	chr3	+	111321558	111321972	True	NM_024508,NM_198196	chr3,chr3	-,+	ZBED2,CD96	-7392,-60683
chr1:84971966-84972197	chr1	+	84972019	84972229	True	NR_036561,NM_005274	chr1,chr1	+,-	SPATA1,GNG5	-96,83
chr16:89788945-89789213	chr16	+	89788946	89789262	True	NM_001113525,NM_152287,NM_004913	chr16,chr16,chr16	+,+,-	ZNF276,ZNF276,C16orf7	-1045,-1604,-1552
chr20:61994189-61995330	chr20	+	61994200	61995258	True	NM_020882,NM_000744	chr20,chr20	+,-	COL20A1,CHRNA4	-69713,-1505
chr1:28995905-28997278	chr1	+	28995951	28996576	True	NM_024482,NM_005644,NM_006582	chr1,chr1,chr1	+,-,+	GMEB1,TAF12,GMEB1	-762,-26347,-762
chr20:32309453-32309901	chr20	+	32309494	32309916	True	NM_032819,NM_007238,NM_183397	chr20,chr20,chr20	+,-,-	ZNF341,PXMP4,PXMP4	9891,-1358,-1358
chr14:24684772-24685203	chr14	+	24684790	24685176	True	NM_174944,NM_001199821,NM_001199822,NM_014169,NM_001184739,NM_138476	chr14,chr14,chr14,chr14,chr14,chr14	+,-,-,-,+,-	TSSK4,MDP1,MDP1,CHMP4A,TSSK4,MDP1	-9915,150,150,-1754,-9915,150
chr3:30649722-30650004	chr3	+	30649722	30650022	True	NM_207359,NM_003242,NM_001024847	chr3,chr3,chr3	-,+,+	GADL1,TGFBR2,TGFBR2	286181,-1782,-1782
chr6:66244337-66245258	chr6	+	66244460	66245146	True	NR_026540,NM_198283	chr6,chr6	+,-	MCART3P,EYS	252625,44601
chr2:97508842-97509435	chr2	+	97508915	97509334	True	NM_144994,NM_199078	chr2,chr2	-,+	ANKRD23,CNNM3	475,-26978
chr6:31237915-31238801	chr6	+	31237918	31238768	True	NM_002117,NR_026791	chr6,chr6	-,+	HLA-C,HCG27	1137,-72432
chr6:31237915-31238801	chr6_cox_hap2	+	2751173	2752023	False	NM_002117,NR_026791	chr6_cox_hap2,chr6_cox_hap2	-,+	HLA-C,HCG27	1137,-70914
chr2:154809073-154810087	chr2	+	154809072	154810142	True	NM_019845,NM_052917	chr2,chr2	-,+	RPRM,GALNT13	-473750,-80710
chrX:71459568-71460375	chrX	+	71460032	71460388	True	NM_001170747,NM_017669	chrX,chrX	+,-	PIN4,ERCC6L	-58567,-1174
chr4:144931059-144932455	chr4	+	144931174	144932077	True	NM_002100,NR_003675	chr4,chr4	-,+	GYPB,LOC441046	8476,-450616
chr4:156756054-156757851	chr4	+	156756065	156757875	True	NM_005651,NM_017419	chr4,chr4	+,-	TDO2,ACCN5	66971,29604
chr8:134203761-134204033	chr8	+	134203822	134204017	True	NR_037944,NM_003882,NM_001045557,NM_001204870,NM_080838,NM_001204869	chr8,chr8,chr8,chr8,chr8,chr8	+,+,-,+,+,+	WISP1,WISP1,SLA,WISP1,WISP1,WISP1	-591,-591,-88512,-591,-591,-591
chr3:185655101-185655403	chr3	+	185655250	185655404	True	NM_004593,NR_033752	chr3,chr3	-,+	TRA2B,LOC344887	570,30862
chr14:64000517-64001073	chr14	+	64000713	64001015	True	NM_006246,NM_015180	chr14,chr14	-,+	PPP2R5E,SYNE2	9122,318667
chr19:1272006-1272332	chr19	+	1272013	1272247	True	NR_027271,NM_017914,NR_023313,NM_001280,NR_023312	chr19,chr19,chr19,chr19,chr19	-,+,+,+,+	C19orf23,C19orf24,CIRBP,CIRBP,CIRBP	-1754,3272,-2797,-2797,-2797
chr3:183906205-183906773	chr3	+	183906216	183906736	True	NM_005787,NM_018358	chr3,chr3	-,+	ALG3,ABCF3	60073,-2404
chrX:47233245-47233889	chrX	+	47233447	47233789	True	NM_003446,NM_007130	chrX,chrX	+,-	ZNF157,ZNF41	-3499,108620
chr1:201978997-201979531	chr1	+	201979024	201979552	True	NM_012134,NM_004433,NM_001114309	chr1,chr1,chr1	-,+,+	LMOD1,ELF3,ELF3	-63308,137,137
chr11:65479763-65479980	chr11	+	65479853	65479929	True	NM_182709,NM_006388,NM_182710,NM_032193	chr11,chr11,chr11,chr11	+,+,+,-	KAT5,KAT5,KAT5,RNASEH2C	-415,-415,-415,8530
chr5:180258007-180258285	chr5	+	180258068	180258270	True	NR_027183,NM_001114617	chr5,chr5	+,-	LOC729678,MGAT1	-1160,-20931
chr9:108321932-108323408	chr9	+	108322118	108323067	True	NM_001198963,NM_006731,NM_001079802,NM_005502	chr9,chr9,chr9,chr9	+,+,+,-	FKTN,FKTN,FKTN,ABCA1	-1758,-1758,-1758,-631591
chr1:26869159-26869635	chr1	+	26869248	26869430	True	NM_001006665,NM_173574	chr1,chr1	+,-	RPS6KA1,ZNF683	2912,-169982
chr19:41286073-41286332	chr19	+	41286105	41286351	True	NR_037791,NM_198476,NM_016154,NR_037775,NM_001202553,NM_006533	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+	RAB4B-EGLN2,C19orf54,RAB4B,MIA-RAB4B,MIA,MIA	-2032,-30277,-2032,-4714,-5074,-4874
chr9:84303478-84303727	chr9	+	84303535	84303757	True	NM_005077,NR_026851	chr9,chr9	-,+	TLE1,FAM75D5	61,224594
chr3:138766132-138766738	chr3	+	138766318	138766698	True	NM_001134657,NR_026783	chr3,chr3	-,+	PRR23C,BPESC1	-2584,56328
chr5:97727703-97728145	chr5	+	97727744	97728098	True	NM_001012761,NR_033932	chr5,chr5	+,-	RGMB,FLJ35946	376900,380740
chr14:24665486-24666686	chr14	+	24665546	24666461	True	NM_006405,NM_001014842,NM_001184739,NM_174944,NM_024658	chr14,chr14,chr14,chr14,chr14	-,-,+,+,-	TM9SF1,TM9SF1,TSSK4,TSSK4,IPO4	-664,-664,8464,8464,-7422
chr1:147015594-147016989	chr1	+	147015626	147016901	True	NM_004326,NM_016361	chr1,chr1	+,-	BCL9,ACP6	-2495,125790
chr5:16465507-16465744	chr5	+	16465513	16465791	True	NM_033414,NM_006317	chr5,chr5	-,+	ZNF622,BASP1	153,751958
chr17:34303804-34304072	chr17	+	34303933	34304028	True	NM_004590,NM_032963,NM_032962,NM_002988	chr17,chr17,chr17,chr17	-,-,-,+	CCL16,CCL14,CCL14,CCL18	4546,9787,9787,87614
chr10:50745927-50746775	chr10	+	50746174	50746678	True	NM_020984,NM_000124	chr10,chr10	+,-	CHAT,ERCC6	70462,519
chr1:24107532-24108831	chr1	+	24108114	24108635	True	NM_001127621,NM_007260,NM_020362	chr1,chr1,chr1	-,+,+	GALE,LYPLA2,PITHD1	17482,9010,-3289
chr5:114632536-114633634	chr5	+	114632617	114633595	True	NM_001284,NM_152549,NM_001040440	chr5,chr5,chr5	+,-,-	AP3S1,CCDC112,CCDC112	544023,-630,-159
chr10:99055387-99055969	chr10	+	99055566	99055786	True	NR_037909,NM_005479,NM_032900,NM_001204300	chr10,chr10,chr10,chr10	-,+,-,-	ARHGAP19-SLIT1,FRAT1,ARHGAP19,ARHGAP19	-3136,23235,-3136,-3136
chr7:33102135-33102536	chr7	+	33102151	33102417	True	NM_001033604,NM_001002010,NR_029372	chr7,chr7,chr7	+,-,-	BBS9,NT5C3,NT5C3	66734,42,42
chr2:242642314-242642632	chr2	+	242642394	242642608	True	NR_033255,NM_032329	chr2,chr2	-,+	DTYMK,ING5	-16011,-989
chrX:57361782-57363060	chrX	+	57362102	57362570	True	NM_019003,NM_174912	chrX,chrX	-,+	SPIN2A,FAAH2	-198044,-49043
chr12:113793770-113795544	chr12	+	113793942	113795273	True	NM_001159727,NM_173542,NM_024959	chr12,chr12,chr12	+,+,-	PLBD2,PLBD2,SLC24A6	1097,1097,-21017
chr11:3651012-3651773	chr11	+	3651264	3651454	True	NM_053017,NR_002720	chr11,chr11	-,+	ART5,TRPC2	12081,-3608
chr6:163833060-163834532	chr6	+	163833236	163834477	True	NM_206854,NM_206855,NM_006775,NR_037593,NM_206853	chr6,chr6,chr6,chr6,chr6	+,+,+,-,+	QKI,QKI,QKI,LOC100526820,QKI	1197,1197,1197,555,1197
chr15:69109782-69109988	chr15	+	69109884	69109974	True	NR_031680,NM_006305	chr15,chr15	+,-	MIR548H4,ANP32A	6328,3337
chr11:118449477-118450108	chr11	+	118449691	118449991	True	NM_001655,NM_001142281,NM_020153	chr11,chr11,chr11	+,+,-	ARCN1,ARCN1,IFT46	-6655,-6655,-12900
chr5:151772110-151774000	chr5	+	151772506	151774044	True	NM_198395,NM_020167	chr5,chr5	+,-	G3BP1,NMUR2	-621088,10847
chr3:129831294-129832910	chr3	+	129831554	129832723	True	NM_001136152,NR_024252	chr3,chr3	+,-	ALG1L2,LOC729375	-30933,-1278
chr7:104564603-104565094	chr7	+	104564605	104564968	True	NM_018682,NR_027374	chr7,chr7	+,-	MLL5,LOC723809	89668,2181
chrY:20714580-20715248	chrY	+	20714639	20715263	True	NM_033108,NM_152584,NR_003509,NR_001530,NM_001001877,NR_003510,NM_153716	chrY,chrY,chrY,chrY,chrY,chrY,chrY	+,+,+,-,+,+,+	HSFY1,HSFY1,HSFY2,TTTY9A,HSFY2,HSFY1,HSFY2	-6123,-6120,-6140,37194,-6120,-6120,-6140
chrY:20714580-20715248	chrY	-	20928910	20929534	False	NM_033108,NR_002159,NM_152584,NR_003509,NM_001001877,NR_003510,NM_153716	chrY,chrY,chrY,chrY,chrY,chrY,chrY	-,+,-,-,-,-,-	HSFY1,TTTY9B,HSFY1,HSFY2,HSFY2,HSFY1,HSFY2	6127,-37193,6124,6144,6124,6124,6144
chr11:62530446-62530762	chr11	+	62530463	62530606	True	NM_002696,NM_006473,NM_024784	chr11,chr11,chr11	+,+,-	POLR2G,TAF6L,ZBTB3	-1503,8268,-8807
chr6:28371076-28371753	chr6	+	28371141	28371500	True	NM_024493,NM_001163391,NR_028077	chr6,chr6,chr6	+,-,-	ZKSCAN3,ZSCAN12,ZSCAN12	-53514,-3597,-3597
chr19:9417731-9419199	chr19	+	9417924	9419161	True	NM_001202406,NM_198535	chr19,chr19	+,-	ZNF559,ZNF699	15286,-2129
chr11:83966659-83967587	chr11	+	83966690	83967588	True	NM_182603,NM_001142700	chr11,chr11	+,-	ANKRD42,DLG2	-1061461,16786
chr21:42873824-42875452	chr21	+	42874077	42875468	True	NM_001178046,NM_001135099,NM_005656	chr21,chr21,chr21	+,-,-	MX1,TMPRSS2,TMPRSS2	-76025,4574,4667
chr17:25410044-25410677	chr17	+	25410140	25410686	True	NM_015626,NM_000625	chr17,chr17	+,-	WSB1,NOS2	210419,716919
chr19:54875362-54876187	chr19	+	54875414	54876084	True	NM_002287,NM_021706,NM_001005367	chr19,chr19,chr19	-,-,+	LAIR1,LAIR1,TTYH1	687,687,50520
chr19:54875362-54876187	chr19	-	55014768	55014818	False	NM_145057,NM_021270,NM_002288	chr19,chr19,chr19	-,+,+	CDC42EP5,LAIR2,LAIR2	-30346,-806,-806
chr19:16142777-16143543	chr19	+	16142925	16143539	True	NR_024336,NR_024335,NM_021187	chr19,chr19,chr19	+,+,-	FLJ25328,FLJ25328,CYP4F11	1749,983,-97249
chr4:930055-930464	chr4	+	930124	930469	True	NM_005255,NM_032326	chr4,chr4	-,+	GAK,TMEM175	-3950,-3921
chr16:68677862-68678349	chr16	+	68677962	68678337	True	NM_018667,NM_001793	chr16,chr16	-,+	SMPD3,CDH3	-195553,116
chrX:152599733-152600002	chrX	+	152599821	152600043	True	NM_001080485,NM_080701	chrX,chrX	+,-	ZNF275,TREX2	-259,111952
chr14:50777779-50778540	chr14	+	50778004	50778568	True	NR_033761,NM_024884,NM_001003805,NM_001003803,NM_015684	chr14,chr14,chr14,chr14,chr14	+,-,+,+,+	ATP5S,L2HGDH,ATP5S,ATP5S,ATP5S	478,429,478,478,478
chr7:64136388-64137847	chr7	+	64136595	64137488	True	NM_001130022,NM_016220	chr7,chr7	-,+	ZNF680,ZNF107	-113090,-10146
chr10:103120018-103122007	chr10	+	103120592	103121722	True	NM_006562,NM_003939,NM_033637	chr10,chr10,chr10	-,+,+	LBX1,BTRC,BTRC	-131875,-6818,-6818
chr6:42791067-42791779	chr6	+	42791150	42791265	True	NM_015349,NM_001008739	chr6,chr6	+,-	KIAA0240,C6orf226	-2416,67346
chr9:71654091-71654634	chr9	+	71654237	71654581	True	NM_001161706,NM_000144,NM_181425,NM_002732	chr9,chr9,chr9,chr9	+,+,+,-	FXN,FXN,FXN,PRKACG	-3809,-3809,-3809,-25198
chr8:7973902-7975343	chr3	+	125535100	125535151	True	NR_024250,NR_031687	chr3,chr3	+,-	LOC100125556,MIR548I1	100292,-25705
chr8:7973902-7975343	chr8	+	7974442	7975087	False	NR_031689,NR_024362	chr8,chr8	-,+	MIR548I3,FLJ10661	-27831,111004
chr12:42877892-42879193	chr12	+	42878107	42879233	True	NM_016488,NM_001144881,NM_001144882,NM_001144883	chr12,chr12,chr12,chr12	+,-,-,-	PPHLN1,PRICKLE1,PRICKLE1,PRICKLE1	-158211,-691,-310,-310
chr7:7515809-7516764	chr7	+	7515867	7516774	True	NM_001037763,NM_019005	chr7,chr7	-,+	COL28A1,MIOS	58736,89841
chr20:43526562-43527240	chr20	+	43526582	43527073	True	NM_006809,NM_001124756	chr20,chr20	-,+	TOMM34,PABPC1L	62100,11629
chr7:31618535-31619834	chr7	+	31618574	31619548	True	NM_194300,NM_022728	chr7,chr7	+,-	CCDC129,NEUROD6	-61647,-238036
chr9:34661435-34663046	chr9	+	34661570	34663041	True	NM_147162,NM_006664,NM_004512,NM_001142784	chr9,chr9,chr9,chr9	+,-,+,+	IL11RA,CCL27,IL11RA,IL11RA	-7689,-17,-7689,-9439
chr5:149795364-149796249	chr5	+	149795597	149796003	True	NM_004355,NM_001025158,NM_001025159,NM_001195141	chr5,chr5,chr5,chr5	-,-,-,+	CD74,CD74,CD74,TCOF1	-3274,-3265,-3274,-58454
chr17:7330753-7331352	chr17	+	7330781	7331300	True	NM_152766,NM_199339,NM_175734,NM_178518	chr17,chr17,chr17,chr17	-,+,+,+	C17orf61,SPEM1,C17orf74,TMEM102	-23331,-7153,-1897,7461
chr10:88431142-88432231	chr10	+	88431270	88432154	True	NM_001080115,NM_001080114,NM_001080116,NM_001171611,NM_001171610,NM_007078,NM_015045	chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,+,-	LDB3,LDB3,LDB3,LDB3,LDB3,LDB3,WAPAL	-2895,-2895,-3000,-2895,-3115,-2895,-149729
chr19:2329102-2330198	chr19	+	2329305	2330117	True	NM_152988,NM_001077238,NM_016199	chr19,chr19,chr19	+,+,-	SPPL2B,SPPL2B,LSM7	-727,-727,-691
chr11:57365654-57365889	chr11	+	57365686	57365768	True	NM_001032295,NM_000062,NM_198183	chr11,chr11,chr11	+,+,-	SERPING1,SERPING1,UBE2L6	-32,-710,-30233
chr10:26505227-26505454	chr10	+	26505303	26505499	True	NM_001134366,NM_001012750,NM_000818	chr10,chr10,chr10	+,-,+	GAD2,ABI1,GAD2	-118,644567,-118
chr11:3836417-3837463	chr11	+	3836456	3837493	True	NM_139131,NR_027018,NM_014489,NR_027016	chr11,chr11,chr11,chr11	-,+,+,+	NUP98,PGAP2,PGAP2,PGAP2	-17434,-7267,-6741,-6741
chr17:10742362-10743248	chr17	+	10742400	10743047	True	NM_020233,NM_001101387	chr17,chr17	+,-	C17orf48,PIRT	-141524,-982
chr11:116700828-116701162	chr11	+	116700902	116701078	True	NM_000039,NM_000482,NM_000040	chr11,chr11,chr11	-,-,+	APOA1,APOA4,APOC3	7310,-6891,-329
chr18:12947398-12947710	chr18	+	12947504	12947644	True	NM_031216,NM_001013437,NM_002828	chr18,chr18,chr18	+,+,-	SEH1L,SEH1L,PTPN2	338,338,-63170
chr18:29264429-29264657	chr18	+	29264521	29264591	True	NM_004775,NM_000371	chr18,chr18	-,+	B4GALT6,TTR	145,-92842
chr19:39263775-39264009	chr19	+	39263817	39264055	True	NM_002307,NM_001042507	chr19,chr19	-,+	LGALS7,LGALS7B	152,15794
chr19:39263775-39264009	chr19	-	39279943	39280181	False	NM_002307,NM_001042507	chr19,chr19	-,+	LGALS7,LGALS7B	-15786,-144
chr9:124034008-124034346	chr9	+	124034014	124034228	True	NM_198252,NM_001127663,NM_001127662,NM_016322,NM_001127667,NM_001127666,NM_001127665,NM_001127664	chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9	+,+,+,-,+,+,+,+	GSN,GSN,GSN,RAB14,GSN,GSN,GSN,GSN	-3685,-3685,-3685,-69649,-3685,-3685,-3685,-3685
chr1:2462416-2462766	chr1	+	2462530	2462730	True	NM_018216,NM_003820,NM_001010926	chr1,chr1,chr1	-,+,-	PANK4,TNFRSF14,HES5	-4495,25074,-846
chr2:178783915-178785643	chr2	+	178784114	178785328	True	NM_001077358,NM_152945	chr2,chr2	-,+	PDE11A,RBM45	2299,191853
chr11:76839241-76840280	chr11	+	76839370	76840160	True	NM_182833,NM_001127180,NM_000260,NM_001127179	chr11,chr11,chr11,chr11	-,+,+,+	GDPD4,MYO7A,MYO7A,MYO7A	158353,-105,-111,-111
chr13:48805751-48807045	chr13	+	48805983	48807075	True	NM_014166,NM_021999	chr13,chr13	-,+	MED4,ITM2B	-136743,198
chr2:37191099-37192787	chr2	+	37191151	37192742	True	NM_174931,NM_003162	chr2,chr2	+,-	CCDC75,STRN	118851,923
chr3:105574611-105575116	chr3	+	105574751	105574924	True	NM_170662,NM_001627	chr3,chr3	-,+	CBLB,ALCAM	13020,-489089
chr7:150722333-150722975	chr7	+	150722742	150722992	True	NM_173681,NM_007188	chr7,chr7	-,+	ATG9B,ABCB8	-1156,2517
chr17:72772676-72773491	chr17	+	72772926	72773442	True	NM_015654,NM_017728	chr17,chr17	-,+	NAT9,TMEM104	-456,-355
chr12:124068652-124068854	chr12	+	124068760	124068902	True	NM_001414,NM_006815	chr12,chr12	-,+	EIF2B1,TMED2	49471,173
chr5:140052142-140052755	chr5	+	140052390	140052796	True	NM_017706,NM_194249	chr5,chr5	+,-	WDR55,DND1	-8057,425
chr4:110791541-110793397	chr4	+	110791652	110793380	True	NM_000204,NM_198506	chr4,chr4	-,+	CFI,LRIT3	-68317,-19218
chr10:43958908-43959789	chr10	+	43959107	43959608	True	NR_026693,NM_001098204	chr10,chr10	+,-	ZNF487P,HNRNPF	-26584,-54411
chr12:50695567-50695902	chr12	+	50695861	50695913	True	NM_016357,NM_001170804	chr12,chr12	-,+	LIMA1,LARP4	-18508,98678
chr7:143953233-143953564	chr7	+	143953233	143953485	True	NR_002158,NM_001005328,NR_002157	chr7,chr7,chr7	-,-,-	OR2A20P,OR2A7,OR2A9P	-4537,3286,-4685
chr17:7622691-7623166	chr17	+	7622760	7623072	True	NM_001126114,NM_020877	chr17,chr17	-,+	TP53,DNAH2	-31897,-12
chr8:21644636-21644945	chr8	+	21644636	21644878	True	NM_001495,NM_001165038,NM_001165039,NM_015024	chr8,chr8,chr8,chr8	-,-,-,+	GFRA2,GFRA2,GFRA2,XPO7	1518,1518,1518,132301
chr16:85643474-85644116	chr16	+	85643579	85644125	True	NM_001134473,NM_014615,NM_016095	chr16,chr16,chr16	+,+,-	KIAA0182,KIAA0182,GINS2	903,2798,78513
chr17:73875230-73876532	chr17	+	73875468	73876386	True	NM_033452,NM_001080419	chr17,chr17	-,+	TRIM47,UNK	-812,-94838
chr7:30213174-30214725	chr7	+	30213202	30214740	True	NM_152793,NR_037513	chr7,chr7	+,-	C7orf41,MIR550B1	-38701,114816
chr14:23568373-23569235	chr14	+	23568501	23569172	True	NM_001164815,NM_001164814,NM_017924,NM_014977	chr14,chr14,chr14,chr14	-,-,+,-	ACIN1,ACIN1,C14orf119,ACIN1	-3678,-3678,-3764,-3678
chr9:131870902-131872100	chr9	+	131871114	131872100	True	NR_028048,NM_000755,NM_178000,NM_021131,NM_178003,NM_001193397,NM_178001	chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,-,+,+,+,+,+	CRAT,CRAT,PPP2R4,PPP2R4,PPP2R4,PPP2R4,PPP2R4	1020,1020,1492,1127,1492,1866,1492
chr1:19637634-19638012	chr1	+	19637645	19637981	True	NM_003689,NM_001040125,NM_001040126,NM_017765	chr1,chr1,chr1,chr1	-,+,+,+	AKR7A2,PQLC2,PQLC2,PQLC2	709,758,758,758
chr17:25668918-25669137	chr17	+	25668917	25669125	True	NM_000625,NM_134265	chr17,chr17	-,+	NOS2,WSB1	458480,-47863
chr4:185571530-185572164	chr4	+	185571562	185572127	True	NM_152683,NM_032991,NM_004346	chr4,chr4,chr4	+,-,-	CCDC111,CASP3,CASP3	-847,-933,-933
chrX:13420407-13422146	chrX	+	13420862	13422070	True	NM_001167890,NM_001135995	chrX,chrX	+,-	EGFL6,ATXN3L	165623,-82344
chr1:236273386-236273588	chr1	+	236273450	236273604	True	NM_002508,NM_003272	chr1,chr1	-,+	NID1,GPR137B	-44969,32227
chr11:43380706-43381027	chr11	+	43380763	43381018	True	NM_018259,NR_033868	chr11,chr11	+,-	TTC17,LOC399881	-379,-89844
chr17:54672551-54673259	chr17	+	54672621	54673265	True	NM_001085430,NM_005450	chr17,chr17	-,+	C17orf67,NOG	220035,-1621
chr10:118381447-118381683	chr10	+	118381474	118381688	True	NM_005396,NM_144661	chr10,chr10	+,-	PNLIPRP2,C10orf82	-1060,47843
chr19:58865162-58865607	chr19	+	58865238	58865602	True	NM_198458,NM_130786,NR_015380	chr19,chr19,chr19	-,-,+	ZNF497,A1BG,A1BG-AS1	8568,-373,-1953
chr19:47287366-47287962	chr19	+	47287457	47287917	True	NM_001145144,NM_001145145,NM_005628,NM_024301	chr19,chr19,chr19,chr19	-,-,-,+	SLC1A5,SLC1A5,SLC1A5,FKRP	2678,267,3975,-38205
chr16:67234513-67234906	chr16	+	67234551	67234823	True	NM_001950,NM_024712,NR_029887	chr16,chr16,chr16	+,+,-	E2F4,ELMO3,MIR328	-8534,-1574,1525
chr16:15530381-15530916	chr16	+	15530588	15530905	True	NM_033201,NM_001184998	chr16,chr16	+,-	C16orf45,KIAA0430	-2322,206170
chr5:77656919-77657291	chr5	+	77657131	77657331	True	NM_003664,NM_004866	chr5,chr5	-,+	AP3B1,SCAMP1	-66603,-846
chrY:25091229-25092078	chrY	+	25091246	25092061	True	NR_002178,NR_002177,NM_004081,NR_001525	chrY,chrY,chrY,chrY	+,+,-,+	TTTY4B,TTTY4C,DAZ1,TTTY4	-8702,-8702,253228,-8702
chrY:25091229-25092078	chrY	-	27236568	27237383	False	NR_002178,NR_002177,NM_001005786,NR_001525	chrY,chrY,chrY,chrY	-,-,+,-	TTTY4B,TTTY4C,DAZ2,TTTY4	8713,8713,-256629,8713
chrY:25091229-25092078	chrY	+	26725004	26725819	False	NR_002178,NM_020364,NR_002177,NR_001525	chrY,chrY,chrY,chrY	+,-,+,+	TTTY4B,DAZ3,TTTY4C,TTTY4	-8713,233870,-8713,-8713
chr1:59612720-59613387	chr1	+	59612971	59613361	True	NR_027120,NM_001113411	chr1,chr1	-,+	LOC729467,FGGY	-492,149263
chr5:132041768-132042809	chr5	+	132042107	132042827	True	NM_007054,NM_172348	chr5,chr5	-,+	KIF3A,IL4	30490,-32792
chr14:74003818-74004100	chr14	+	74003846	74004142	True	NM_203309,NM_001037161	chr14,chr14	-,+	HEATR4,ACOT1	21559,31
chr14:74003818-74004100	chr14	+	74035819	74035869	False	NM_203309,NM_006821	chr14,chr14	-,+	HEATR4,ACOT2	-10168,-98
chrX:19787361-19787849	chrX	+	19787625	19787905	True	NM_001173456,NM_001024666	chrX,chrX	+,-	PDHA1,SH3KBP1	-425679,30070
chr1:36849281-36850538	chr1	+	36849325	36850470	True	NM_024676,NM_032017	chr1,chr1	+,-	SH3D21,STK40	-76681,1072
chr19:21264224-21265137	chr19	+	21264279	21264956	True	NM_182515,NM_021269	chr19,chr19	+,-	ZNF714,ZNF708	-4,247306
chr5:68537444-68538726	chr5	+	68537784	68538570	True	NM_176816,NM_001799	chr5,chr5	-,+	CCDC125,CDK7	77890,-7214
chrX:10821129-10821611	chrX	+	10821166	10821469	True	NM_001122608,NM_033290	chrX,chrX	+,-	HCCS,MID1	307936,30402
chr9:130659530-130659799	chr9	+	130659617	130659751	True	NM_001018078,NM_013443	chr9,chr9	+,-	FPGS,ST6GALNAC6	-94160,2170
chr2:180596246-180596582	chr2	+	180596249	180596597	True	NM_182678,NM_001113397	chr2,chr2	+,-	UBE2E3,ZNF385B	1248514,14222
chr2:234660950-234661805	chr2	+	234660951	234661758	True	NR_037695,NR_037694,NR_037696,NM_001001394,NM_000463	chr2,chr2,chr2,chr2,chr2	-,-,-,-,+	LOC100286922,LOC100286922,LOC100286922,DNAJB3,UGT1A1	2283,2283,2283,-8290,7160
chr10:43937982-43938912	chr10	+	43938203	43938514	True	NR_026693,NM_001098204	chr10,chr10	+,-	ZNF487P,HNRNPF	-5690,-33507
chr7:1650723-1651588	chr7	+	1650812	1651527	True	NM_001134340,NR_001288	chr7,chr7	-,+	PSMG3,TFAMP1	-41144,2578
chrX:119249516-119250112	chrX	+	119249590	119249914	True	NM_139282,NM_032498	chrX,chrX	-,+	RHOXF1,RHOXF2	-5,42552
chr2:208989322-208991024	chr2	+	208989390	208991060	True	NM_020989,NM_006891,NM_001178000	chr2,chr2,chr2	-,-,+	CRYGC,CRYGD,PIKFYVE	3550,-77,139930
chr14:104094312-104094550	chr14	+	104094359	104094505	True	NM_005552,NM_182923,NM_001130107,NM_001015048	chr14,chr14,chr14,chr14	+,+,+,-	KLC1,KLC1,KLC1,BAG5	1019,1019,1019,-65208
chr1:55447407-55447889	chr1	+	55447410	55447914	True	NM_014762,NM_182532	chr1,chr1	-,+	DHCR24,TMEM61	-94489,-996
chr14:56233112-56233747	chr14	+	56233126	56233764	True	NR_026796,NR_004844	chr14,chr14	-,+	C14orf34,RPL13AP3	29678,-214
chr15:88797908-88798694	chr15	+	88798047	88798685	True	NM_002530,NM_001012338,NM_022839,NM_001007156	chr15,chr15,chr15,chr15	-,-,+,-	NTRK3,NTRK3,MRPS11,NTRK3	1026,1026,211998,1026
chr7:131241844-131242616	chr7	+	131241959	131242634	True	NM_001018111,NM_005397,NM_013255	chr7,chr7,chr7	-,-,+	PODXL,PODXL,MKLN1	-583,-583,-229415
chr19:17971543-17972292	chr19	+	17971547	17972125	True	NM_000980,NM_000215,NR_001593,NR_000012	chr19,chr19,chr19,chr19	+,-,+,+	RPL18A,JAK3,RPL18AP3,SNORA68	-867,-12706,-871,1271
chr1:39879588-39880263	chr1	+	39880028	39880296	True	NR_003929,NM_015038	chr1,chr1	-,+	PPIEL,KIAA0754	145126,-4905
chr20:36156314-36156530	chr20	+	36156327	36156519	True	NM_005386,NM_001167821,NM_001167820,NM_001167823,NM_001167822,NM_006698,NM_181689	chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,-,-,-,-,-,+	NNAT,BLCAP,BLCAP,BLCAP,BLCAP,BLCAP,NNAT	-6771,-193,6,-3374,-244,6,-6771
chr7:99516111-99516631	chr7	+	99516394	99516674	True	NM_033091,NM_033017,NR_036679	chr7,chr7,chr7	-,-,+	TRIM4,TRIM4,AZGP1P1	599,599,61710
chr15:62455785-62456046	chr15	+	62455824	62456058	True	NM_001007595,NM_207322	chr15,chr15	-,+	C2CD4B,C2CD4A	1474,-96699
chr11:14664206-14664560	chr11	+	14664243	14664596	True	NM_148976,NM_000922	chr11,chr11	-,+	PSMA1,PDE3B	635,672
chr6:90604354-90606086	chr6	+	90604452	90606045	True	NM_014611,NM_032602	chr6,chr6	-,+	MDN1,GJA10	-75010,-315
chr4:106391497-106391958	chr4	+	106391841	106392007	True	NR_003586,NM_176869,NM_006903,NM_176867,NM_176866	chr4,chr4,chr4,chr4,chr4	+,-,-,-,-	EEF1A1P9,PPA2,PPA2,PPA2,PPA2	13855,3270,3270,3270,3270
chr6:111279071-111279663	chr6	+	111279169	111279620	True	NM_138408,NR_002932	chr6,chr6	+,-	GTF3C6,GSTM2P1	142,89188
chr9:130829267-130829567	chr9	+	130829276	130829613	True	NM_197956,NM_001006641	chr9,chr9	-,+	NAIF1,SLC25A25	36,865
chr1:112050273-112050514	chr1	+	112050325	112050495	True	NM_020683,NM_174896,NM_000677	chr1,chr1,chr1	-,+,-	ADORA3,C1orf162,ADORA3	-3582,-33772,-3582
chr1:36271761-36272929	chr1	+	36271862	36272722	True	NM_017629,NM_022111	chr1,chr1	+,-	EIF2C4,CLSPN	1105,-36311
chr15:81592156-81592478	chr15	+	81592175	81592527	True	NM_004513,NM_181900	chr15,chr15	+,-	IL16,STARD5	-2972,24047
chr1:169957303-169957671	chr1	+	169957364	169957676	True	NM_001136107,NM_001204517	chr1,chr1	+,-	METTL11B,KIFAP3	157511,80436
chr3:47017853-47018072	chr3	+	47017858	47018078	True	NM_144716,NM_015175	chr3,chr3	-,+	CCDC12,NBEAL2	242,3094
chr2:242832299-242832914	chr2	+	242832669	242832947	True	NM_173821,NM_005018	chr2,chr2	+,-	C2orf85,PDCD1	-20835,-31611
chr5:53157991-53158697	chr5	+	53158044	53158618	True	NR_030307,NM_002495	chr5,chr5	-,+	MIR581,NDUFS4	88861,-301630
chr18:44561419-44561664	chr18	+	44561570	44561686	True	NM_145653,NM_001100817,NM_016427,NM_031303	chr18,chr18,chr18,chr18	-,-,-,+	TCEB3C,TCEB3CL,TCEB3B,KATNAL2	-5121,-5357,352,-34834
chr19:49995834-49996862	chr19	+	49995878	49996462	True	NR_001285,NR_026712,NR_000020,NR_000021,NM_012423,NR_000019,NR_000018,NM_001015,NR_029703	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,+,+,+,-	SNORD35B,RPL13AP5,SNORD33,SNORD32A,RPL13A,SNORD34,SNORD35A,RPS11,MIR150	4513,-5068,-2059,-2710,-5068,-1769,-1501,3171,7713
chr1:24241046-24242983	chr1	+	24241345	24242886	True	NM_001841,NM_017761	chr1,chr1	-,+	CNR2,PNRC2	-1528,43414
chr6:110677792-110678114	chr6	+	110677823	110678063	True	NM_001123364,NM_015891	chr6,chr6	-,+	C6orf186,CDC40	1462,-176250
chr3:187590554-187591272	chr3	+	187590652	187591076	True	NR_034062,NM_001706	chr3,chr3	+,-	LOC100131635,BCL6	-170550,-127139
chr18:3354193-3356128	chr18	+	3354216	3355906	True	NM_019856,NM_174886	chr18,chr18	-,+	MYOM1,TGIF1	-134110,56165
chrX:54465869-54466622	chrX	+	54466297	54466511	True	NM_004463,NM_058163	chrX,chrX	-,+	FGD1,TSR2	56150,341
chr6:33280519-33280746	chr6_qbl_hap6	+	4512787	4512941	False	NM_001145338,NM_172208,NM_005453,NM_172209,NM_001185181,NM_003190	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	-,-,-,-,+,-	ZBTB22,TAPBP,ZBTB22,TAPBP,PFDN6,TAPBP	5075,1519,4868,1519,-23183,1519
chr6:33280519-33280746	chr6_mcf_hap5	+	4754282	4754436	False	NM_001145338,NM_172208,NM_005453,NM_172209,NM_001185181,NM_003190	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	-,-,-,-,+,-	ZBTB22,TAPBP,ZBTB22,TAPBP,PFDN6,TAPBP	5076,1520,4869,1520,-23177,1520
chr6:33280519-33280746	chr6_cox_hap2	+	4724353	4724507	False	NM_001145338,NM_172208,NM_005453,NM_172209,NM_001185181,NM_003190	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	-,-,-,-,+,-	ZBTB22,TAPBP,ZBTB22,TAPBP,PFDN6,TAPBP	5077,1519,4870,1519,-23178,1519
chr6:33280519-33280746	chr6	+	33280540	33280694	True	NM_001145338,NM_172208,NM_005453,NM_172209,NM_001185181,NM_003190	chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,-,+,-	ZBTB22,TAPBP,ZBTB22,TAPBP,PFDN6,TAPBP	5075,1520,4868,1520,-23179,1520
chr6:33280519-33280746	chr6_dbb_hap3	+	4561864	4562018	False	NM_001145338,NM_172208,NM_005453,NM_172209,NM_001185181,NM_003190	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	-,-,-,-,+,-	ZBTB22,TAPBP,ZBTB22,TAPBP,PFDN6,TAPBP	5075,1519,4868,1519,-23177,1519
chr10:119135747-119136240	chr10	+	119135856	119136200	True	NM_173791,NM_003054	chr10,chr10	-,+	PDZD8,SLC18A2	-919,-135324
chr1:36688584-36689183	chr1	+	36688763	36689196	True	NM_014408,NM_005119	chr1,chr1	-,+	TRAPPC3,THRAP3	-73696,820
chr1:23858051-23858735	chr1	+	23858132	23858753	True	NM_004091,NR_027042	chr1,chr1	-,+	E2F2,MDS2	-420,95070
chrX:33146587-33147487	chrX	+	33146586	33147543	True	NM_004010,NM_152631,NM_004009	chrX,chrX,chrX	-,+,-	DMD,FAM47B,DMD	-42,1813369,-41
chr6:25769753-25770503	chr6	+	25769848	25770542	True	NM_170745,NM_005495	chr6,chr6	-,+	HIST1H2AA,SLC17A4	-43058,-14980
chr1:100817231-100817858	chr1	+	100817235	100817873	True	NM_033313,NM_033312,NM_001918,NM_003672	chr1,chr1,chr1,chr1	+,+,-,+	CDC14A,CDC14A,DBT,CDC14A	149,149,-101826,149
chr1:26758822-26759519	chr1	+	26758963	26759555	True	NM_024887,NM_205861,NM_173574	chr1,chr1,chr1	+,+,-	DHDDS,DHDDS,ZNF683	-212,-212,-59697
chr9:19234617-19235699	chr9	+	19234882	19235607	True	NR_038064,NM_017925	chr9,chr9	-,+	PLIN2,DENND4C	-107278,55141
chr6:14764634-14765061	chr6	+	14764721	14765059	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	481467,898280
chr5:159542554-159543354	chr5	+	159542896	159543046	True	NM_001130864,NM_052927,NM_001130958	chr5,chr5,chr5	-,-,+	PWWP2A,PWWP2A,FABP6	3462,3462,71327
chr19:31843299-31844376	chr19	+	31843468	31844172	True	NM_020856,NR_026894	chr19,chr19	-,+	TSHZ3,DKFZp566F0947	-3278,-202736
chr1:159793367-159794404	chr1	+	159793459	159794322	True	NM_001134233,NM_020125	chr1,chr1	-,+	C1orf204,SLAMF8	30872,2156
chr11:118992550-118993278	chr11	+	118992713	118993250	True	NM_015517,NM_198971,NM_001382	chr11,chr11,chr11	+,+,-	HINFP,HINFP,DPAGT1	-476,-476,-19928
chr6:87864966-87865231	chr6	+	87864985	87865244	True	NM_000735,NM_015021	chr6,chr6	-,+	CGA,ZNF292	-60161,24
chr9:37424734-37425628	chr9	+	37424929	37425665	True	NM_012203,NM_014872	chr9,chr9	+,-	GRHPR,ZBTB5	-2273,39792
chr6:46916466-46917858	chr6	+	46916551	46917828	True	NM_005588,NM_015234	chr6,chr6	+,-	MEP1A,GPR116	-155508,4897
chrX:118739759-118740045	chrX	+	118739763	118740041	True	NM_001173487,NM_181777,NM_017544	chrX,chrX,chrX	-,+,-	NKRF,UBE2A,NKRF	43,-25516,43
chr4:6275446-6276071	chr4	+	6275462	6275766	True	NM_006005,NM_144720,NM_001145853	chr4,chr4,chr4	+,-,+	WFS1,JAKMIP1,WFS1	-3936,-73144,-3936
chr1:28696972-28697503	chr1	+	28697010	28697547	True	NM_014280,NM_001048183	chr1,chr1	-,+	DNAJC8,PHACTR4	-137468,-968
chr7:75989993-75990546	chr7	+	75990421	75990513	True	NM_012479,NM_007155	chr7,chr7	-,+	YWHAG,ZP3	-2079,36327
chrX:107686686-107687540	chrX	+	107686686	107687353	True	NM_033641,NM_033380,NM_000495,NM_001847	chrX,chrX,chrX,chrX	-,+,+,-	COL4A6,COL4A5,COL4A5,COL4A6	-5028,-3587,-3587,-3982
chr2:71127959-71128418	chr2	+	71128130	71128358	True	NM_015717,NM_012476	chr2,chr2	-,+	CD207,VAX2	-65177,-467
chr5:40834031-40834327	chr5	+	40834213	40834351	True	NM_032587,NR_002583,NR_037665,NM_000997	chr5,chr5,chr5,chr5	+,-,-,-	CARD6,SNORD72,LOC100506548,RPL37	7058,-1376,-4969,1086
chr15:59948321-59949441	chr15	+	59948517	59949332	True	NM_004751,NM_004492	chr15,chr15	+,-	GCNT3,GTF2A2	-44593,455
chr14:23400703-23401154	chr14	+	23400858	23401155	True	NM_006109,NM_173527,NM_001039619	chr14,chr14,chr14	-,+,-	PRMT5,REM2,PRMT5	-2197,-48486,-2197
chr15:70124493-70125202	chr15	+	70124497	70125170	True	NR_026764,NR_030714	chr15,chr15	+,-	C15orf50,MIR629	2402,246687
chr17:78232637-78233717	chr17	+	78232644	78233642	True	NM_000199,NM_020914,NM_020954	chr17,chr17,chr17	-,+,+	SGSH,RNF213,RNF213	-38445,1024,1024
chr17:58497748-58498710	chr17	+	58498301	58498680	True	NM_181707,NM_032582	chr17,chr17	+,-	C17orf64,USP32	1184,-28715
chr1:201489610-201490234	chr1	+	201489620	201490106	True	NR_026667,NM_004078	chr1,chr1	+,-	RPS10P7,CSRP1	-639,-13233
chr2:113874563-113875375	chr2	+	113874603	113875315	True	NM_000577,NM_173843,NM_173841,NM_173178,NM_173842	chr2,chr2,chr2,chr2,chr2	+,+,+,-,+	IL1RN,IL1RN,IL1RN,IL1F8,IL1RN	154,154,154,-64163,9822
chr5:10562135-10562558	chr5	+	10562153	10562495	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	1939,198942
chr20:31062361-31062708	chr20	+	31062473	31062687	True	NM_080616,NR_034152	chr20,chr20	-,+	C20orf112,LOC149950	8651,112593
chrX:50541793-50542895	chrX	+	50541889	50542885	True	NM_020717,NR_003933	chrX,chrX	-,+	SHROOM4,LOC347376	14209,105546
chr1:218520941-218522112	chr1	+	218521049	218522146	True	NM_003238,NM_018040,NM_001135599	chr1,chr1,chr1	+,-,+	TGFB2,GPATCH2,TGFB2	-2427,-716640,-2427
chr5:99406333-99407261	chr5	+	99406601	99406719	True	NM_198507,NR_027503	chr5,chr5	+,-	FAM174A,LOC100133050	464404,317289
chr5:99406333-99407261	chr5	-	37448480	37448537	False	NM_153485,NM_018034	chr5,chr5	-,+	NUP155,WDR70	-77283,-69126
chr5:99406333-99407261	chr5	-	98839912	98839969	False	NM_001270,NR_036530	chr5,chr5	-,+	CHD1,LOC100289230	-577674,-575132
chr7:45812367-45813623	chr7	+	45812894	45813420	True	NR_024271,NM_000596	chr7,chr7	-,+	SEPT7P2,IGFBP1	-4277,114538
chr1:244615754-244617000	chr1	+	244615901	244616612	True	NM_173807,NM_001126,NM_001130957	chr1,chr1,chr1	+,-,+	C1orf101,ADSS,C1orf101	8060,-465,8060
chr19:36037244-36037632	chr19	+	36037337	36037669	True	NM_032635,NM_000704	chr19,chr19	+,-	TMEM147,ATP4A	-843,16941
chr10:46091205-46091447	chr10	+	46091204	46091496	True	NM_001002265,NM_145021,NM_001169106	chr10,chr10,chr10	-,-,+	MARCH8,MARCH8,FAM21C	-850,-850,131151
chr19:56159061-56159268	chr19	+	56159163	56159235	True	NM_007279,NM_001012478,NM_016202,NM_013301,NM_001163423,NM_203374,NM_207115,NM_016535	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,-,+,+	U2AF2,U2AF2,ZNF580,CCDC106,ZNF580,ZNF784,ZNF580,ZNF581	6180,6180,-5796,-260,-5751,-23222,-6822,-4228
chr13:74707427-74707685	chr13	+	74707481	74707684	True	NR_034024,NM_007249	chr13,chr13	+,-	LOC338864,KLF12	419295,432
chr1:1385559-1386148	chr1	+	1385742	1386106	True	NR_026871,NM_001039211	chr1,chr1	-,+	LOC441869,ATAD3C	-29092,-724
chr1:1385559-1386148	chr1	+	1451074	1451124	False	NM_001170536,NM_001170535,NM_018188,NM_001114748	chr1,chr1,chr1,chr1	+,+,+,-	ATAD3A,ATAD3A,ATAD3A,C1orf70	-3215,-3602,-3602,24666
chr22:41469835-41470195	chr22	+	41469932	41470244	True	NM_138481,NR_031694	chr22,chr22	-,+	CHADL,MIR1281	166741,18272
chr1:25254856-25255186	chr1	+	25254958	25255180	True	NM_013943,NM_004350	chr1,chr1	+,-	CLIC4,RUNX3	-183249,1640
chr9:101561561-101562366	chr9	+	101561613	101562195	True	NM_173551,NM_024642	chr9,chr9	-,+	ANKS6,GALNT12	-2819,7785
chr16:3563259-3563608	chr16	+	3563279	3563435	True	NM_024793,NM_001080524	chr16,chr16	+,-	CLUAP1,C16orf90	-3436,-17858
chr6:15249202-15249493	chr6	+	15249299	15249537	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	-2824,413802
chr10:62747401-62747812	chr10	+	62747442	62747670	True	NM_033379,NR_024554	chr10,chr10	+,-	CDK1,RHOBTB1	-209288,13116
chr17:78163417-78163916	chr17	+	78163431	78163825	True	NM_000199,NM_052819	chr17,chr17	-,+	SGSH,CARD14	30424,-1883
chr2:203151150-203151884	chr2	+	203151283	203151762	True	NM_003352,NR_003694,NR_003031	chr2,chr2,chr2	-,+,+	SUMO1,SNORD11B,SNORD11	-47961,4277,6011
chrX:118989117-118990666	chrX	+	118989352	118990419	True	NM_004541,NM_080632,NM_023010	chrX,chrX,chrX	+,-,-	NDUFA1,UPF3B,UPF3B	15314,-2361,-2361
chr10:15901579-15901884	chr10	+	15901660	15901838	True	NM_024948,NM_001001484	chr10,chr10	-,+	FAM188A,PTER	731,577128
chr15:52314268-52314548	chr15	+	52314387	52314483	True	NM_138792,NM_002748	chr15,chr15	-,+	LEO1,MAPK6	-50429,-3030
chr14:76040152-76040741	chr14	+	76040227	76040562	True	NM_017791,NM_007176	chr14,chr14	+,-	FLVCR2,C14orf1	4377,87027
chr16:75239028-75239432	chr16	+	75239111	75239399	True	NM_001025200,NM_001906	chr16,chr16	-,+	CTRB2,CTRB1	1723,13484
chr16:75239028-75239432	chr16	-	75257357	75257645	False	NM_001906,NM_001170721	chr16,chr16	+,-	CTRB1,BCAR1	-4524,15386
chr17:1551622-1551879	chr17	+	1551648	1551892	True	NM_001163673,NR_028075,NM_031430,NR_028076,NM_145352,NM_145350,NM_003693	chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,-,-,-,-	WDR81,SCARF1,RILP,SCARF1,SCARF1,SCARF1,SCARF1	67924,-2607,1550,-2607,-2607,-2607,-2607
chrX:47061068-47061878	chrX	+	47061107	47061831	True	NM_003334,NR_024235,NR_024616	chrX,chrX,chrX	+,-,+	UBA1,NDUFB11,INE1	-7957,-56498,2415
chr1:47652479-47653475	chr1	+	47652681	47653311	True	NM_005764,NM_001010969	chr1,chr1	-,+	PDZK1IP1,CYP4A22	2510,-49625
chr1:33420055-33421272	chr1	+	33420387	33420879	True	NM_002143,NM_001127361,NM_153341	chr1,chr1,chr1	+,-,-	HPCA,RNF19B,RNF19B	-68348,9457,9457
chr18:33709594-33709943	chr18	+	33709602	33709936	True	NM_012319,NM_018255,NM_001099406	chr18,chr18,chr18	-,+,-	SLC39A6,ELP2,SLC39A6	-245,4,-245
chr12:132566250-132567298	chr12	+	132566254	132566984	True	NM_175066,NR_003290	chr12,chr12	-,+	DDX51,EP400NL	61946,1843
chr22:25387935-25388272	chr22	+	25388045	25388285	True	NM_001001663,NM_001145206	chr22,chr22	-,+	TMEM211,KIAA1671	-52731,35655
chr21:44740651-44741036	chr21	+	44740651	44740935	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	128968,106117
chr3:154145714-154146346	chr3	+	154145788	154146321	True	NM_001038705,NM_015595	chr3,chr3	-,+	GPR149,ARHGEF26	1233,-306690
chr5:134869688-134870247	chr5	+	134869747	134870290	True	NM_145282,NM_006161	chr5,chr5	+,-	SLC25A48,NEUROG1	300074,1408
chr22:43042925-43044069	chr22	+	43042942	43044050	True	NM_001171660,NM_001171661,NM_001129819,NM_000398,NM_007326,NR_029422,NM_001165877	chr22,chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,-,+,-	CYB5R3,CYB5R3,CYB5R3,CYB5R3,CYB5R3,RNU12,ATP5L2	-2302,53,53,1405,53,-31742,-6335
chr14:71106472-71107311	chr14	+	71106833	71107209	True	NM_015351,NM_005466	chr14,chr14	+,-	TTC9,MED6	1294,-39449
chr6:2901009-2901423	chr6	+	2901071	2901361	True	NR_026855,NM_004155	chr6,chr6	+,-	DKFZP686I15217,SERPINB9	86839,2234
chr11:87880983-87882366	chr11	+	87881335	87882253	True	NM_022337,NM_000372	chr11,chr11	-,+	RAB38,TYR	26434,1028786
chr19:37959566-37960011	chr19	+	37959718	37959976	True	NM_144694,NM_152484	chr19,chr19	+,-	ZNF570,ZNF569	5,-1379
chr12:64242085-64242415	chr12	+	64242095	64242311	True	NM_020762,NM_173812	chr12,chr12	+,-	SRGAP1,DPY19L2	-3605,-179741
chr17:15518785-15519839	chr17	+	15518920	15519849	True	NM_006382,NM_001130842	chr17,chr17	-,+	CDRT1,ZNF286A	3219,83041
chr17:15518785-15519839	chr17	-	18651232	18651456	False	NM_001145045,NM_031456	chr17,chr17	-,+	ZNF286B,FBXW10	-65660,-3957
chr19:9546235-9546810	chr19	+	9546239	9546655	True	NM_198058,NM_006631,NM_001172651	chr19,chr19,chr19	-,-,+	ZNF266,ZNF266,ZNF177	-5,-5,-59298
chr19:10222708-10223020	chr19	+	10222956	10223028	True	NM_002566,NM_031917,NM_003755,NM_001198690,NR_003688,NR_004381,NM_001040664,NM_020230	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,-,+,+,+,+,+	P2RY11,ANGPTL6,EIF3G,PPAN-P2RY11,SNORD105B,SNORD105,PPAN-P2RY11,PPAN	-810,-9531,7621,-6108,-2582,-4680,-6108,-6108
chr12:52607018-52607907	chr12	+	52607280	52607944	True	NM_182507,NR_027358	chr12,chr12	-,+	KRT80,LOC283404	-21496,-2617
chr2:149265251-149267074	chr2	+	149265604	149266962	True	NM_181742,NM_015630	chr2,chr2	-,+	ORC4,EPC2	-486431,135597
chr2:132121644-132123535	chr2	+	132121644	132123061	True	NM_001077637,NR_036499	chr2,chr2	-,+	LOC150786,LOC389043	87,37412
chr5:99400285-99400695	chr5	+	99400328	99400642	True	NM_198507,NR_027503	chr5,chr5	+,-	FAM174A,LOC100133050	470481,323366
chr5:99400285-99400695	chr5	+	99713977	99714053	False	NM_198507,NR_027503	chr5,chr5	+,-	FAM174A,LOC100133050	157070,9955
chr10:79397183-79397416	chr10	+	79397183	79397347	True	NR_024585,NM_001014797,NM_001161353,NM_001161352,NM_002247	chr10,chr10,chr10,chr10,chr10	+,-,-,-,-	LOC100128292,KCNMA1,KCNMA1,KCNMA1,KCNMA1	289222,280,280,280,280
chrX:149737753-149738044	chrX	+	149737755	149738080	True	NM_001184808,NM_000252	chrX,chrX	-,+	CD99L2,MTM1	329260,-759
chr20:49124431-49125097	chr20	+	49124767	49125138	True	NM_080829,NM_002827	chr20,chr20	-,+	FAM65C,PTPN1	128339,1752
chr16:75017453-75018029	chr16	+	75017453	75017615	True	NM_030581,NM_032268	chr16,chr16	-,+	WDR59,ZNRF1	1452,15299
chr10:88830073-88830607	chr10	+	88830394	88830614	True	NM_005271,NM_019054	chr10,chr10	-,+	GLUD1,FAM35A	24212,24338
chr22:43732422-43733303	chr22	+	43732427	43733305	True	NM_173050,NM_001044370	chr22,chr22	-,+	SCUBE1,MPPED1	6100,74714
chr4:8440700-8441982	chr4	+	8440725	8441937	True	NM_003501,NM_001101667,NM_152544	chr4,chr4,chr4	-,-,+	ACOX3,ACOX3,METTL19	566,566,594
chr20:34025543-34025874	chr20	+	34025634	34025912	True	NM_007186,NM_000557	chr20,chr20	+,-	CEP250,GDF5	17310,165
chr11:1645443-1646825	chr11	+	1645505	1646725	True	NM_001012709,NM_001001480	chr11,chr11	-,+	KRTAP5-4,KRTAP5-5	-2137,4307
chr1:225651886-225652396	chr1	+	225651896	225652432	True	NM_194442,NM_001130440	chr1,chr1	-,+	LBR,SRP9	-35339,313082
chr11:64491231-64492168	chr11	+	64491629	64492165	True	NM_153378,NM_138732,NM_015080	chr11,chr11,chr11	+,-,-	SLC22A12,NRXN2,NRXN2	-133398,-969,-969
chr22:42370781-42371557	chr22	+	42370898	42371594	True	NM_024053,NM_145733,NM_019106	chr22,chr22,chr22	-,+,+	CENPM,SEPT3,SEPT3	-27750,1336,1336
chr5:99405406-99406079	chr5	+	99405964	99406088	True	NM_198507,NR_027503	chr5,chr5	+,-	FAM174A,LOC100133050	465035,317920
chr20:33880132-33880457	chr20	+	33880176	33880490	True	NM_006690,NM_002212,NM_181466,NM_178468,NM_181468	chr20,chr20,chr20,chr20,chr20	+,-,-,-,-	MMP24,EIF6,EIF6,FAM83C,EIF6	-65688,-7582,-7582,49,-7670
chr10:43866873-43868026	chr10	+	43867114	43868075	True	NM_001184963,NM_001098208,NM_173160	chr10,chr10,chr10	+,-,+	FXYD4,HNRNPF,FXYD4	-73,24256,-73
chr19:6483392-6483951	chr19	+	6483437	6483943	True	NM_174881,NM_024898	chr19,chr19	+,-	CRB3,DENND1C	-19228,-1639
chr19:15795840-15796201	chr19	+	15795913	15796245	True	NM_023944,NR_033864	chr19,chr19	+,-	CYP4F12,CYP4F24P	-12078,94603
chr19:16606685-16606931	chr19	+	16606843	16606919	True	NM_145046,NM_032207	chr19,chr19	-,+	CALR3,C19orf44	134,285
chr15:90069445-90070541	chr15	+	90069481	90070532	True	NR_027074,NR_027075,NR_027076,NR_027077,NM_152259	chr15,chr15,chr15,chr15,chr15	-,-,-,-,+	LOC283761,LOC283761,LOC283761,LOC283761,C15orf42	-2216,-2216,-2216,-2216,48285
chr1:164527553-164528099	chr1	+	164527774	164528090	True	NM_002585,NM_001174069,NM_001204963,NM_001204961	chr1,chr1,chr1,chr1	+,-,+,+	PBX1,LMX1A,PBX1,PBX1	506,797438,506,506
chr1:17762336-17763444	chr1	+	17762667	17763443	True	NM_001136204,NM_018715,NM_207421	chr1,chr1,chr1	-,-,+	RCC2,RCC2,PADI6	1664,2827,-63984
chr12:56389166-56390075	chr12	+	56389286	56390011	True	NM_006928,NM_000456,NM_001032386,NM_001032387	chr12,chr12,chr12,chr12	-,+,+,+	PMEL,SUOX,SUOX,SUOX	-28790,1031,1031,1031
chr1:24124205-24124625	chr1	+	24124207	24124661	True	NM_001008216,NM_000403,NM_007260,NM_001127621	chr1,chr1,chr1,chr1	-,-,+,-	GALE,GALE,LYPLA2,GALE	2683,2423,-6612,1449
chr18:48331454-48332713	chr18	+	48331517	48332323	True	NM_001168335,NM_001127175	chr18,chr18	+,-	ME2,MRO	73108,14161
chr1:1336675-1337684	chr1	+	1336797	1337621	True	NM_001039577,NM_017971,NR_015434,NM_030937	chr1,chr1,chr1,chr1	-,-,+,-	CCNL2,MRPL20,LOC148413,CCNL2	-2079,5122,-1938,-2079
chr2:201466578-201467500	chr2	+	201466743	201467535	True	NM_001159,NM_152387	chr2,chr2	+,-	AOX1,KCTD18	-16064,-91951
chrX:97982171-97983235	chrX	+	97982323	97982928	True	NR_024608,NM_013347	chrX,chrX	-,+	LOC442459,RPA4	1211976,-1843475
chr7:106509003-106509617	chr7	+	106509008	106509604	True	NM_175884,NM_002649	chr7,chr7	-,+	FLJ36031,PIK3CG	-207374,-3135
chrX:48337015-48338251	chrX	+	48337030	48337794	True	NM_012280,NM_033518,NM_177439,NM_177434	chrX,chrX,chrX,chrX	+,-,+,+	FTSJ1,SLC38A5,FTSJ1,FTSJ1	-2532,-8386,-2532,-701
chrX:53462485-53463308	chrX	+	53462492	53463224	True	NM_001037811,NM_001031745,NM_004493	chrX,chrX,chrX	-,+,-	HSD17B10,RIBC1,HSD17B10	-1169,-12653,-1169
chr16:71387929-71388413	chr16	+	71387975	71388381	True	NM_007088,NR_027910,NM_018348,NM_001740	chr16,chr16,chr16,chr16	+,+,-,+	CALB2,CALB2,FTSJD1,CALB2	4234,4234,-64466,4234
chr4:111119369-111119721	chr4	+	111119374	111119770	True	NM_001130721,NM_024090,NM_001977	chr4,chr4,chr4	-,-,+	ELOVL6,ELOVL6,ENPEP	51,100,277458
chr3:169633524-169634358	chr3	+	169633745	169634159	True	NM_024727,NM_182610	chr3,chr3	-,+	LRRC31,SAMD7	-46085,-4318
chr2:48801369-48802646	chr2	+	48801704	48802257	True	NM_001198594,NM_172311,NM_000233	chr2,chr2,chr2	+,+,-	STON1-GTF2A1L,STON1-GTF2A1L,LHCGR	5468,-5596,180683
chr15:34497285-34498712	chr15	+	34497734	34498618	True	NM_024713,NM_016454	chr15,chr15	-,+	C15orf29,TMEM85	3737,18626
chr5:79947601-79947819	chr5	+	79947632	79947695	True	NM_001190470,NM_002439,NM_000791	chr5,chr5,chr5	-,+,-	MTRNR2L2,MSH3,DHFR	-778,2598,3156
chr16:67310179-67311201	chr16	+	67310457	67311247	True	NM_013241,NM_015432,NM_001129728,NM_001129729,NM_001129727,NM_001129731	chr16,chr16,chr16,chr16,chr16,chr16	-,+,+,+,+,+	FHOD1,PLEKHG4,PLEKHG4,PLEKHG4,PLEKHG4,PLEKHG4	-29032,165,1802,2241,828,2244
chr14:103781471-103781750	chr14	+	103781567	103781751	True	NR_033938,NM_001969	chr14,chr14	-,+	LOC100131366,EIF5	-126202,18741
chr19:36702415-36704233	chr19	+	36702771	36704068	True	NM_001042474,NM_007145,NM_152477,NM_001099638,NM_001099639	chr19,chr19,chr19,chr19,chr19	-,+,-,+,+	ZNF565,ZNF146,ZNF565,ZNF146,ZNF146	1968,1435,1548,1435,1435
chr12:2025959-2026806	chr12	+	2026199	2026853	True	NM_001163926,NM_172364	chr12,chr12	+,-	LRTM2,CACNA2D4	-96817,1067
chr8:39558559-39560074	chr8	+	39558862	39560102	True	NM_014237,NM_001464	chr8,chr8	+,-	ADAM18,ADAM2	-116834,135729
chr19:57185036-57185561	chr19	+	57185126	57185604	True	NM_001193628,NM_001005850	chr19,chr19	+,-	LOC147670,ZNF835	-30650,-880
chr13:31042684-31043121	chr13	+	31042737	31042999	True	NM_005800,NM_002128	chr13,chr13	+,-	USPL1,HMGB1	148830,-2656
chr7:95935708-95937183	chr7	+	95935842	95937186	True	NM_004411,NM_001160210	chr7,chr7	+,-	DYNC1I1,SLC25A13	-534075,14323
chr17:35734320-35734782	chr17	+	35734647	35734740	True	NM_198836,NM_173625	chr17,chr17	-,+	ACACA,C17orf78	-18588,-1722
chr2:178126112-178127491	chr2	+	178126244	178127146	True	NM_194247,NM_006164,NR_036075,NM_001145412,NM_001145413	chr2,chr2,chr2,chr2,chr2	+,-,-,-,-	HNRNPA3,NFE2L2,MIR3128,NFE2L2,NFE2L2	-48874,2763,-5506,1521,1521
chr12:63328252-63328522	chr12	+	63328462	63328528	True	NR_029661,NM_020700	chr12,chr12	+,-	MIRLET7I,PPM1H	-331047,187
chr17:76919885-76920275	chr17	+	76919915	76920199	True	NM_003255,NM_030968	chr17,chr17	-,+	TIMP2,C1QTNF1	1323,100051
chr4:144258812-144259051	chr4	+	144258811	144259049	True	NM_001168235,NM_207123,NM_002039	chr4,chr4,chr4	-,+,+	FREM3,GAB1,GAB1	362829,-879,-879
chr20:61924421-61924761	chr20	+	61924507	61924743	True	NM_152864,NR_036220,NM_020882	chr20,chr20,chr20	-,+,+	NKAIN4,MIR4326,COL20A1	-38615,-6398,-20
chr3:154026732-154028291	chr3	+	154027327	154028228	True	NM_015595,NM_001114397	chr3,chr3	+,-	ARHGEF26,DHX36	-188236,14113
chr1:40635210-40635455	chr1	+	40635310	40635374	True	NM_001142604,NM_012421	chr1,chr1	-,+	PPT1,RLF	-72168,-8324
chr6:27113242-27114263	chr6	+	27113275	27114217	True	NM_080596,NM_003495,NR_036096,NM_080593	chr6,chr6,chr6,chr6	+,+,+,-	HIST1H2AH,HIST1H4I,MIR3143,HIST1H2BK	690,-6238,1187,470
chr7:129914995-129916323	chr7	+	129915034	129916333	True	NM_001869,NM_032842	chr7,chr7	+,-	CPA2,TMEM209	-8382,-69696
chr2:203499992-203500394	chr2	+	203499992	203500408	True	NM_178231,NM_173511	chr2,chr2	-,+	ICA1L,FAM117B	235837,-142
chr15:102031918-102032236	chr15	+	102031937	102032269	True	NM_002570,NM_001005326,NM_138324,NM_138319,NM_138325,NM_138322,NM_138323,NM_138320,NM_138321	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,+,-,-,-,-,-,-,-	PCSK6,OR4F6,PCSK6,PCSK6,PCSK6,PCSK6,PCSK6,PCSK6,PCSK6	-1750,313653,-1750,-1750,-1750,-1750,-1750,-1750,-1750
chr9:4487778-4488552	chr9	+	4487977	4488454	True	NM_001039395,NM_004170	chr9,chr9	-,+	C9orf68,SLC1A1	178281,1972
chr13:51480136-51481396	chr13	+	51480139	51480577	True	NM_001142279,NM_024570,NM_198989	chr13,chr13,chr13	+,+,-	RNASEH2B,RNASEH2B,DLEU7	3236,3236,-62254
chr11:13302686-13303980	chr11	+	13302827	13303942	True	NM_001030273,NM_001030272,NM_001178,NM_032320	chr11,chr11,chr11,chr11	+,+,+,-	ARNTL,ARNTL,ARNTL,BTBD10	-3554,-3554,-3554,180947
chr5:154090157-154090792	chr5	+	154090398	154090705	True	NM_015315,NR_036094	chr5,chr5	+,-	LARP1,MIR3141	1756,-114766
chr20:4701088-4701446	chr20	+	4701133	4701453	True	NR_024267,NM_012409	chr20,chr20	-,+	PRNT,PRND	19911,1102
chr22:22874557-22875466	chr22	+	22874561	22875292	True	NM_080740,NR_027426	chr22,chr22	-,+	ZNF280A,LOC648691	-34,26463
chr22:24199596-24199932	chr22	+	24199680	24199970	True	NM_198440,NM_001024939,NM_001024938,NM_030807	chr22,chr22,chr22,chr22	-,+,+,+	DERL3,SLC2A11,SLC2A11,SLC2A11	-18481,70,-672,-672
chrX:34960971-34961451	chrX	+	34961131	34961495	True	NM_152631,NM_031442	chrX,chrX	+,-	FAM47B,TMEM47	-269,-285726
chrX:34960971-34961451	chrX	+	37026666	37026716	False	NM_006520,NM_001013736	chrX,chrX	-,+	DYNLT3,FAM47C	680223,-285
chr10:25240790-25241132	chr10	+	25240790	25241020	True	NM_020200,NM_024838	chr10,chr10	-,+	PRTFDC1,THNSL1	563,64487
chr6:64033970-64035507	chr6	+	64033989	64035514	True	NM_001143940,NM_016571,NM_003463	chr6,chr6,chr6	-,-,+	LGSN,LGSN,PTP4A1	-4107,-4107,246405
chr4:187072249-187073857	chr4	+	187072478	187073468	True	NM_001006655,NM_015398,NM_021069	chr4,chr4,chr4	+,+,-	FAM149A,FAM149A,SORBS2	-2205,-6537,-194608
chr16:25122449-25122693	chr16	+	25122624	25122742	True	NM_018054,NM_001032391,NM_016309	chr16,chr16,chr16	-,+,+	ARHGAP17,LCMT1,LCMT1	-95949,304,304
chr9:116844366-116844980	chr9	+	116844448	116845008	True	NM_032888,NM_001633	chr9,chr9	+,-	COL27A1,AMBP	73222,-3696
chr5:112629017-112629441	chr5	+	112629057	112629483	True	NM_002387,NM_022828	chr5,chr5	-,+	MCC,YTHDC2	1179,219907
chr9:137967131-137967342	chr9	+	137967184	137967390	True	NM_014279,NM_006334,NM_002003	chr9,chr9,chr9	+,+,-	OLFM1,OLFM1,FCN1	-146,-132,-157378
chr19:15491310-15492918	chr19	+	15491328	15492703	True	NM_005858,NR_031716	chr19,chr19	-,+	AKAP8,MIR1470	-725,67655
chr15:94577090-94578328	chr15	+	94577248	94578124	True	NM_001159643,NM_020211	chr15,chr15	+,-	MCTP2,RGMA	263305,-944805
chr1:60509184-60509860	chr1	+	60509354	60509696	True	NM_015888,NM_152377	chr1,chr1	+,-	HOOK1,C1orf87	-228881,29796
chr16:58494779-58495636	chr16	+	58494816	58495302	True	NM_001130487,NR_002978,NM_020465,NM_022910	chr16,chr16,chr16,chr16	+,-,+,+	NDRG4,SNORA46,NDRG4,NDRG4	2691,87285,2246,3462
chr17:41465750-41466105	chr17	+	41465790	41466032	True	NR_027412,NR_027413,NM_001661	chr17,chr17,chr17	-,-,+	LOC100130581,LOC100130581,ARL4D	284,284,10320
chr15:45807572-45808990	chr15	+	45808278	45808668	True	NR_022014,NM_013309	chr15,chr15	+,-	HMGN2P46,SLC30A4	-5007,6384
chr5:59983646-59984291	chr5	+	59984100	59984334	True	NR_028509,NM_001145208	chr5,chr5	+,-	PART1,DEPDC1B	-200400,11709
chr16:2206247-2206526	chr16	+	2206255	2206469	True	NR_002736,NM_014353,NM_032271	chr16,chr16,chr16	-,+,+	SNORD60,RAB26,TRAF7	-1149,-7655,-507
chr10:88727103-88727567	chr10	+	88727157	88727597	True	NM_003087,NM_024756,NM_133447,NM_006829	chr10,chr10,chr10,chr10	+,-,+,+	SNCG,MMRN2,AGAP11,C10orf116	-8920,-9732,2900,590
chr19:11530127-11531306	chr19	+	11530141	11531307	True	NM_001001329,NM_001161616,NM_001035223	chr19,chr19,chr19	+,-,-	PRKCSH,RGL3,RGL3	14961,-123,-123
chr17:17208442-17208915	chr17	+	17208477	17208894	True	NM_003653,NM_020201	chr17,chr17	-,+	COPS3,NT5M	-23860,-1849
chr9:140196038-140196387	chr9	+	140196054	140196290	True	NM_017723,NM_001004354	chr9,chr9	+,-	C9orf167,NRARP	-23825,463
chr9:134382421-134382960	chr9	+	134382520	134382906	True	NM_001136114,NM_001136113,NM_001135954,NM_007171,NM_001077365,NM_001077366	chr9,chr9,chr9,chr9,chr9,chr9	+,+,-,+,+,+	POMT1,POMT1,UCK1,POMT1,POMT1,POMT1	-4283,-4283,23806,-4283,-4283,-4283
chr13:50700604-50701259	chr13	+	50700636	50701215	True	NR_002612,NR_002605	chr13,chr13	-,+	DLEU2,DLEU1	-959,-44273
chr2:97305276-97305651	chr2	+	97305402	97305596	True	NM_017991,NM_001113382,NM_001115016	chr2,chr2,chr2	-,+,-	KIAA1310,FER1L5,KIAA1310	-1287,2977,-1287
chr14:65175082-65176399	chr14	+	65175227	65176312	True	NM_015549,NM_001024858	chr14,chr14	+,-	PLEKHG3,SPTB	-4085,113604
chr9:103492435-103493247	chr9	+	103492446	103493299	True	NM_017746,NM_001018116	chr9,chr9	-,+	TEX10,MURC	-377187,-152161
chr5:121648495-121648991	chr5	+	121648569	121648976	True	NM_005460,NM_002317	chr5,chr5	+,-	SNCAIP,LOX	-800,-234514
chr19:36632019-36632253	chr19	+	36632076	36632258	True	NM_001003962,NM_001864,NM_001749	chr19,chr19,chr19	+,-,+	CAPNS1,COX7A1,CAPNS1	-1209,11563,-1209
chr1:196972905-196973594	chr1	+	196972959	196973591	True	NM_030787,NM_001994	chr1,chr1	+,-	CFHR5,F13B	-26355,62861
chr12:22090444-22092145	chr12	+	22090456	22092176	True	NM_020298,NM_018686,NM_020297,NM_005691	chr12,chr12,chr12,chr12	-,+,-,-	ABCC9,CMAS,ABCC9,ABCC9	-828,106982,-828,-828
chr2:167163038-167164401	chr2	+	167163066	167164438	True	NM_001079810,NM_002977	chr2,chr2	+,-	XIRP2,SCN9A	580558,68109
chr11:122754680-122755596	chr11	+	122754850	122755501	True	NM_024806,NM_001098169,NM_199124	chr11,chr11,chr11	+,-,+	C11orf63,BSX,C11orf63	-1436,96929,-1436
chr16:2040470-2040794	chr16	+	2040473	2040539	True	NM_144603,NM_172168,NM_004209,NM_172167,NM_005262	chr16,chr16,chr16,chr16,chr16	-,-,+,-,+	NOXO1,NOXO1,SYNGR3,NOXO1,GFER	-9033,-9289,-578,-9289,-6374
chr16:15244996-15246020	chr16	+	15245363	15245964	True	NM_015027,NR_037466	chr16,chr16	+,-	PDXDC1,MIR3180-4	-176581,2945
chr16:15244996-15246020	chr16	+	2182715	2183261	False	NM_001009944,NM_000296,NR_037467,NM_014353	chr16,chr16,chr16,chr16	-,-,-,+	PKD1,PKD1,MIR3180-5,RAB26	2688,2688,2919,15389
chr16:15244996-15246020	chr16	+	18492602	18492745	False	NR_036142,NR_003569,NR_036141,NR_036144	chr16,chr16,chr16,chr16	-,+,-,-	MIR3180-2,ABCC6P1,MIR3180-1,MIR3180-3	3430,89824,3434,3434
chr16:15244996-15246020	chr16	-	16407115	16407258	False	NR_036142,NR_036447,NR_036141,NM_001079528,NR_036144	chr16,chr16,chr16,chr16,chr16	+,+,+,-,+	MIR3180-2,PKD1P1,MIR3180-1,ABCC6,MIR3180-3	-3431,4207,-3435,-89787,-3435
chr16:15244996-15246020	chr16	-	15008008	15008604	False	NR_036142,NR_023387,NR_036141,NR_036144	chr16,chr16,chr16,chr16	+,-,+,+	MIR3180-2,ABCC6P2,MIR3180-1,MIR3180-3	-2978,-89449,-2982,-2982
chr17:38465584-38466785	chr17	+	38465587	38466721	True	NM_000964,NM_001145301,NM_001145302,NM_152219	chr17,chr17,chr17,chr17	+,+,+,-	RARA,RARA,RARA,GJD3	-215,7751,7751,54274
chr19:47554134-47554973	chr19	+	47554163	47554245	True	NM_002517,NM_017854	chr19,chr19	+,-	NPAS1,TMEM160	-30072,-2281
chr19:47554134-47554973	chr19	-	47900893	47900944	False	NM_001009813,NM_014681	chr19,chr19	-,+	MEIS3,DHX34	21892,-48407
chr19:51646148-51646353	chr19	+	51646250	51646310	True	NM_014385,NM_145232,NM_016543	chr19,chr19,chr19	+,-,+	SIGLEC7,CTU1,SIGLEC7	-743,-34603,-743
chr5:148724159-148724914	chr5	+	148724312	148724914	True	NM_152407,NM_014443	chr5,chr5	+,-	GRPEL2,IL17B	62,33974
chr2:232062132-232062349	chr2	+	232062176	232062388	True	NM_025139,NM_000867	chr2,chr2	+,-	ARMC9,HTR2B	953,-72352
chrX:48826208-48826584	chrX	+	48826232	48826564	True	NM_001167992,NM_004979	chrX,chrX	+,-	PQBP1,KCND1	-70508,1737
chr19:49833188-49834121	chr19	+	49833459	49833891	True	NM_001040031,NM_014037,NM_001774	chr19,chr19,chr19	+,-,+	CD37,SLC6A16,CD37	4785,-4985,4785
chrX:31285165-31285487	chrX	+	31285298	31285526	True	NM_203391,NM_004018,NM_004019,NM_004015,NM_004016,NM_004017	chrX,chrX,chrX,chrX,chrX,chrX	+,-,-,-,-,-	GK,DMD,DMD,DMD,DMD,DMD	-613881,-274,-274,-274,-274,-274
chr17:73840820-73841176	chr17	+	73840907	73841131	True	NM_199242,NM_001080419	chr17,chr17	-,+	UNC13D,UNK	-109,-60277
chr1:160317772-160318305	chr1	+	160317886	160318335	True	NM_004371,NM_015331,NM_001098398	chr1,chr1,chr1	-,+,-	COPA,NCSTN,COPA	-4532,-4881,-4532
chr22:42346918-42348398	chr22	+	42347250	42348278	True	NM_024053,NM_001002876,NR_024355	chr22,chr22,chr22	-,-,+	CENPM,CENPM,LOC339674	-4102,-4102,-88
chr4:145040837-145041306	chr4	+	145040876	145041016	True	NM_022475,NM_002099	chr4,chr4	+,-	HHIP,GYPA	526131,20938
chr11:10827158-10828020	chr11	+	10827345	10827557	True	NR_034137,NM_001418,NR_004403,NM_001042559,NM_001172705	chr11,chr11,chr11,chr11,chr11	+,-,-,-,-	LOC729013,EIF4G2,SNORD97,EIF4G2,EIF4G2	52206,3075,-4190,3075,2036
chr5:94988606-94989322	chr5	+	94988716	94989313	True	NM_031952,NM_001131066,NM_173362,NM_001131065	chr5,chr5,chr5,chr5	-,+,+,+	SPATA9,RFESD,RFESD,RFESD	29458,-6287,-6185,-6185
chr11:118178478-118180010	chr11	+	118178484	118179824	True	NM_000733,NM_000732	chr11,chr11	+,-	CD3E,CD3D	-3240,33701
chr8:81393516-81394200	chr8	+	81393779	81393929	True	NM_005079,NM_023929,NM_001105539	chr8,chr8,chr8	-,+,+	TPD52,ZBTB10,ZBTB10	-309943,4518,4518
chr3:137854911-137855173	chr3	+	137855077	137855201	True	NM_014154,NM_016161	chr3,chr3	+,-	ARMC8,A4GNT	50946,-3848
chrX:142723123-142723751	chrX	+	142723420	142723794	True	NM_001012989,NM_001184750,NM_001184749,NM_173078	chrX,chrX,chrX,chrX	+,-,-,-	UBE2NL,SLITRK4,SLITRK4,SLITRK4	243378,-1101,182,-401
chr8:125954103-125955569	chr8	+	125954135	125955571	True	NR_027321,NM_014846	chr8,chr8	+,-	LOC157381,KIAA0196	-54,148540
chr1:70820256-70820507	chr1	+	70820300	70820532	True	NM_030816,NR_027404,NM_001036645,NM_001036646,NM_001031693	chr1,chr1,chr1,chr1,chr1	-,+,+,+,+	ANKRD13C,HHLA3,HHLA3,HHLA3,HHLA3	-23,2,2,2,2
chr5:167715541-167716221	chr5	+	167715586	167716153	True	NM_001161661,NM_015238,NM_001161662,NR_029520	chr5,chr5,chr5,chr5	+,+,+,-	WWC1,WWC1,WWC1,MIR103-1	2911,2911,2911,271875
chr10:103595378-103595919	chr10	+	103595457	103595731	True	NM_024747,NM_173195,NM_173191,NM_173192,NM_173193,NM_173194,NM_014591,NM_173197	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,-,-,-,-,-,-,-	HPS6,KCNIP2,KCNIP2,KCNIP2,KCNIP2,KCNIP2,KCNIP2,KCNIP2	229392,7996,7996,7996,7996,3930,7996,7996
chr12:124245931-124246523	chr12	+	124245935	124246431	True	NM_207437,NM_001414	chr12,chr12	+,-	DNAH10,EIF2B1	610,-127612
chr22:29784766-29785024	chr22	+	29784772	29784837	True	NM_001127,NM_145730,NM_001166019,NM_021026	chr22,chr22,chr22,chr22	-,-,-,+	AP1B1,AP1B1,AP1B1,RFPL1	-200,-200,-200,49734
chr10:111767656-111767983	chr10	+	111767730	111767995	True	NM_001121,NM_019903,NR_030724,NM_016824	chr10,chr10,chr10,chr10	+,+,-,+	ADD3,ADD3,XPNPEP1,ADD3	-70,-2055,-84419,-70
chr4:6473425-6473629	chr4	+	6473451	6473621	True	NM_020416,NM_015274	chr4,chr4	-,+	PPP2R2C,MAN2B2	755,103280
chr19:45682851-45683103	chr19	+	45682872	45683144	True	NM_212550,NM_024108	chr19,chr19	+,-	BLOC1S3,TRAPPC6A	-920,-1387
chr7:134854681-134854993	chr7	+	134854695	134854931	True	NM_018295,NR_024186,NR_024185,NM_024033	chr7,chr7,chr7,chr7	+,-,-,-	TMEM140,C7orf49,C7orf49,C7orf49	-21987,651,651,651
chr11:83392400-83392642	chr11	+	83392400	83392684	True	NM_182603,NM_001142702	chr11,chr11	+,-	ANKRD42,DLG2	-487160,834
chr15:81491283-81492777	chr15	+	81491544	81492414	True	NM_001172128,NM_181900	chr15,chr15	+,-	IL16,STARD5	-2382,124160
chr18:10473010-10473386	chr18	+	10473021	10473205	True	NM_153000,NM_022068	chr18,chr18	+,-	APCDD1,FAM38B	-18447,675606
chr9:134005283-134005825	chr9	+	134005282	134005871	True	NM_005085,NM_033387	chr9,chr9	+,-	NUP214,FAM78A	-4354,146085
chr3:108250122-108250546	chr3	+	108250173	108250365	True	NM_014648,NM_014981	chr3,chr3	+,-	DZIP3,MYH15	57971,-2004
chr14:20903394-20904206	chr14	+	20903658	20904226	True	NM_001109997,NM_001641	chr14,chr14	-,+	KLHL33,APEX1	143,19063
chr18:22052303-22053984	chr18	+	22052484	22053976	True	NM_021624,NM_080597	chr18,chr18	+,-	HRH4,OSBPL1A	-11943,-74694
chr11:7985762-7986139	chr11	+	7985803	7986100	True	NM_003754,NM_176821	chr11,chr11	+,-	EIF3F,NLRP10	22766,-744
chr19:3184623-3185367	chr19	+	3184787	3185367	True	NM_003775,NM_198969,NM_020170	chr19,chr19,chr19	+,-,+	S1PR4,AES,NCLN	-6115,-121823,507
chr6:42989995-42990242	chr6	+	42990196	42990258	True	NM_057161,NM_033112,NM_014623	chr6,chr6,chr6	+,+,-	KLHDC3,RRP36,MEA1	-8270,-862,-8578
chr10:69417459-69418267	chr10	+	69417642	69418316	True	NM_001127384,NM_012238	chr10,chr10	-,+	CTNNA3,SIRT1	7156,226110
chr22:43341205-43341665	chr22	+	43341381	43341700	True	NM_001197,NM_007229	chr22,chr22	+,-	BIK,PACSIN2	165056,1398
chr18:29340078-29340294	chr18	+	29340223	29340333	True	NM_001034172,NM_000371	chr18,chr18	-,+	MCART2,TTR	560,-168544
chr16:70559091-70559718	chr16	+	70559226	70559595	True	NM_012426,NM_015386,NR_003696,NR_037420,NM_001195139	chr16,chr16,chr16,chr16,chr16	+,-,+,+,-	SF3B3,COG4,SNORD111B,MIR3647,COG4	-1586,-1769,3809,3806,-1769
chr19:52535032-52535982	chr19	+	52535262	52535682	True	NM_024840,NM_025040	chr19,chr19	+,-	ZNF613,ZNF614	-104635,-3582
chr10:99392267-99392804	chr10	+	99392362	99392728	True	NM_018425,NM_178832,NM_001098831	chr10,chr10,chr10	+,-,-	PI4K2A,MORN4,MORN4	7714,666,1235
chr9:73705563-73705768	chr9	+	73705567	73705656	True	NM_182505,NM_001007471	chr9,chr9	+,-	C9orf85,TRPM3	820766,30921
chr6:41516442-41518081	chr6	+	41516669	41518127	True	NM_001012426,NM_001012427,NM_007162,NM_138457	chr6,chr6,chr6,chr6	+,+,-,+	FOXP4,FOXP4,TFEB,FOXP4	-2556,-2556,184721,-2556
chr16:31453101-31453336	chr16	+	31453102	31453256	True	NM_001136509,NM_001105247	chr16,chr16	-,+	ZNF843,ARMC5	1142,17060
chr14:56044945-56045983	chr14	+	56045026	56045925	True	NM_004986,NR_027123,NM_001079521,NM_001079522,NM_182926	chr14,chr14,chr14,chr14,chr14	+,-,+,+,+	KTN1,C14orf33,KTN1,KTN1,KTN1	999,935,999,999,999
chr1:45203145-45203584	chr1	+	45203351	45203515	True	NM_006845,NM_153274	chr1,chr1	+,-	KIF2C,BEST4	1974,49961
chr7:30517430-30518271	chr7	+	30517517	30518267	True	NM_006092,NR_002186	chr7,chr7	-,+	NOD1,DKFZP586I1420	176,-107909
chr5:56468422-56469122	chr5	+	56468538	56469011	True	NM_001203246,NM_001127235,NM_022913,NM_152622	chr5,chr5,chr5,chr5	+,+,+,-	GPBP1,GPBP1,GPBP1,MIER3	763,2263,763,-220584
chr5:133341069-133341297	chr5	+	133341135	133341279	True	NR_036625,NR_036624,NM_003374,NM_003202	chr5,chr5,chr5,chr5	-,-,-,+	VDAC1,VDAC1,VDAC1,TCF7	-478,-478,-311,109122
chr11:67807295-67807762	chr11	+	67807471	67807634	True	NM_030930,NM_006019,NM_002496,NM_006053	chr11,chr11,chr11,chr11	-,+,+,+	UNC93B1,TCIRG1,NDUFS8,TCIRG1	-35878,-1067,-9445,2812
chr9:136892407-136893370	chr9	+	136892410	136893359	True	NM_003371,NR_015427	chr9,chr9	-,+	VAV2,NCRNA00094	-34964,-1900
chr7:27219735-27220404	chr7	+	27219738	27220238	True	NM_005523,NM_018951,NR_037940,NR_037939,NM_153715,NR_002795	chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,+	HOXA11,HOXA10,HOXA10-HOXA9,HOXA10,HOXA10,HOXA11-AS1	4647,-5783,42,42,38,4788
chr11:67478232-67478660	chr11	+	67478315	67478687	True	NM_007103,NM_001031615	chr11,chr11	+,-	NDUFV1,ALDH3B2	-104043,-29630
chr11:67478232-67478660	chr11	-	71319124	71319182	False	NM_001012710,NM_001005405	chr11,chr11	+,-	KRTAP5-10,KRTAP5-11	-42566,-25203
chr22:38003737-38004478	chr22	+	38003914	38004465	True	NM_001172688,NM_013365,NM_001172687,NM_006498,NM_001001561,NM_001001560	chr22,chr22,chr22,chr22,chr22,chr22	+,+,+,-,+,+	GGA1,GGA1,GGA1,LGALS2,GGA1,GGA1	581,15,15,-27890,15,15
chr5:132363703-132364165	chr5	+	132363946	132364019	True	NM_017665,NM_002154	chr5,chr5	-,+	ZCCHC10,HSPA4	-1706,23642
chr22:44709264-44709901	chr22	+	44709454	44709844	True	NM_001099294,NM_001137606	chr22,chr22	-,+	KIAA1644,PARVG	-723,-132248
chr3:193852996-193853224	chr3	+	193853035	193853219	True	NR_033944,NM_005524	chr3,chr3	-,+	LOC647323,HES1	-131587,711
chr14:105558066-105558726	chr14	+	105558127	105558707	True	NM_174891,NM_013345	chr14,chr14	+,-	C14orf79,GPR132	-105562,-26373
chr9:139619758-139620718	chr9	+	139619988	139620630	True	NR_003672,NR_024543,NR_024542,NM_152421,NR_002975,NR_002958	chr9,chr9,chr9,chr9,chr9,chr9	-,-,-,+,-,-	SNHG7,SNHG7,SNHG7,FAM69B,SNORA43,SNORA17	2056,2056,2056,-13015,109,751
chr12:133284611-133285630	chr12	+	133284639	133285153	True	NM_001170544,NM_001170543,NM_138575,NM_006231	chr12,chr12,chr12,chr12	+,+,+,-	PGAM5,PGAM5,PGAM5,POLE	2239,2239,2239,-20694
chr1:202925197-202926217	chr1	+	202925334	202926248	True	NM_015999,NM_001127687,NM_138391	chr1,chr1,chr1	-,-,+	ADIPOR1,ADIPOR1,TMEM183A	1287,1502,50285
chr5:115910558-115910872	chr5	+	115910558	115910638	True	NM_020796,NM_016144	chr5,chr5	-,+	SEMA6A,COMMD10	-7,-489882
chr15:32934623-32935879	chr15	+	32934792	32935796	True	NM_003020,NR_036650,NM_001144757	chr15,chr15,chr15	+,-,+	SCG5,LOC100288615,SCG5	-973,-108850,-973
chr3:47555442-47555734	chr3	+	47555441	47555555	True	NM_015466,NM_001031703	chr3,chr3	+,-	PTPN23,C3orf75	-133001,-242
chr6:5974431-5975821	chr6	+	5974543	5975386	True	NM_016588,NM_004271	chr6,chr6	-,+	NRN1,LY86	32297,613547
chr1:54308706-54309734	chr1	+	54308840	54309577	True	NM_000792,NR_033142,NM_001168551,NM_018087	chr1,chr1,chr1,chr1	+,-,-,-	DIO1,TMEM48,TMEM48,TMEM48	50283,-4615,-4615,-4615
chr15:101109853-101110833	chr15	+	101110035	101110849	True	NM_024708,NM_178842	chr15,chr15	+,-	ASB7,LASS3	31905,-25110
chr17:68086758-68087076	chr17	+	68086760	68087114	True	NM_170742,NR_036534	chr17,chr17	+,-	KCNJ16,FLJ36644	13880,78485
chr5:131744862-131746249	chr5	+	131744998	131746042	True	NM_001013717,NR_037898	chr5,chr5	+,-	C5orf56,LOC553103	630,-39390
chrX:130037256-130038974	chrX	+	130037326	130038714	True	NM_144967,NM_182314,NM_006375	chrX,chrX,chrX	+,-,-	ARHGAP36,ENOX2,ENOX2	153501,-118,-118
chr16:1495096-1495433	chr16	+	1495210	1495396	True	NM_001143980,NM_016111	chr16,chr16	-,+	CCDC154,TELO2	-720,47955
chr6:111197487-111197741	chr6	+	111197519	111197779	True	NM_001634,NM_001033059,NM_015076	chr6,chr6,chr6	+,+,-	AMD1,AMD1,CDK19	-1583,-1582,-61107
chr1:155264682-155264963	chr1	+	155264693	155264959	True	NM_001135822,NM_000298,NM_181871	chr1,chr1,chr1	+,-,-	FDPS,PKLR,PKLR	13579,6316,5883
chr1:193075064-193075799	chr1	+	193075067	193075635	True	NM_197962,NM_024529,NM_016066	chr1,chr1,chr1	-,+,-	GLRX2,CDC73,GLRX2	-511,15452,26
chr1:100320729-100321104	chr1	+	100320778	100321086	True	NM_000643,NM_000642,NM_000645,NM_000644,NM_000646,NM_000028,NM_001013660	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,+,-	AGL,AGL,AGL,AGL,AGL,AGL,FRRS1	-4791,-5196,5679,-4791,-4305,-4791,-89429
chr17:6349286-6349926	chr17	+	6349305	6349923	True	NM_019013,NM_014336,NM_001195228	chr17,chr17,chr17	+,-,+	FAM64A,AIPL1,FAM64A	-1630,-10786,-1630
chr11:59825170-59825700	chr11	+	59825397	59825689	True	NM_006138,NM_001031809,NM_001031666,NM_152851	chr11,chr11,chr11,chr11	+,+,+,-	MS4A3,MS4A3,MS4A3,MS4A6A	-1347,-1347,-1347,125035
chr6:24663222-24665109	chr6	+	24663345	24664978	True	NM_018473,NM_016614,NM_001160094	chr6,chr6,chr6	+,-,+	ACOT13,TDP2,ACOT13	2284,2188,2284
chrX:101694637-101695382	chrX	+	101694917	101695216	True	NR_002216,NM_022053	chrX,chrX	+,-	NXF4,NXF2	109676,-64
chrX:101694637-101695382	chrX	-	101501806	101502105	False	NM_001012978,NM_022053	chrX,chrX	-,+	BEX5,NXF2	-90820,64
chr14:104552909-104553211	chr14	+	104553049	104553231	True	NM_004894,NM_001080464	chr14,chr14	-,+	C14orf2,ASPG	-165146,-1077
chr1:173611991-173612575	chr1	+	173612036	173612208	True	NM_001195190,NM_198493	chr1,chr1	+,-	LOC730159,ANKRD45	-7426,26851
chr6:7313626-7313980	chr6	+	7313627	7313758	True	NM_031480,NM_003144	chr6,chr6	+,-	RIOK1,SSR1	76303,-86
chr9:98277362-98277891	chr9	+	98277417	98277853	True	NM_001010895,NM_001083607,NM_001083602,NM_001083603,NM_001083604,NM_001083605,NM_001083606,NM_000264	chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9	+,-,-,-,-,-,-,-	C9orf102,PTCH1,PTCH1,PTCH1,PTCH1,PTCH1,PTCH1,PTCH1	360046,-7936,1444,1444,-7095,-7095,-7718,-6586
chr20:61902752-61903649	chr20	+	61903036	61903459	True	NM_018209,NM_152864,NM_175609	chr20,chr20,chr20	+,-,+	ARFGAP1,NKAIN4,ARFGAP1	705,-17144,705
chr8:1920449-1921132	chr8	+	1920485	1921101	True	NR_033895,NM_014867	chr8,chr8	-,+	LOC286083,KBTBD11	-669658,942
chr19:4063909-4064175	chr19	+	4063940	4064223	True	NM_015897,NM_015898	chr19,chr19	+,-	PIAS4,ZBTB7A	-56242,2643
chr6:32096726-32097182	chr6_mcf_hap5	+	3476590	3477048	False	NM_001136153,NM_138717,NM_022110,NM_004381	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	-,+,-,-	ATF6B,PPT2,FKBPL,ATF6B	-745,24003,897,-745
chr6:32096726-32097182	chr6_dbb_hap3	+	3375934	3376392	False	NM_001136153,NM_138717,NM_022110,NM_004381	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	-,+,-,-	ATF6B,PPT2,FKBPL,ATF6B	-745,24009,897,-745
chr6:32096726-32097182	chr6	+	32096762	32097220	True	NM_001136153,NM_138717,NM_004381,NM_022110	chr6,chr6,chr6,chr6	-,+,-,-	ATF6B,PPT2,ATF6B,FKBPL	-745,24008,-745,897
chr6:32096726-32097182	chr6_cox_hap2	+	3567422	3567880	False	NM_001136153,NM_138717,NM_022110,NM_004381	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	-,+,-,-	ATF6B,PPT2,FKBPL,ATF6B	-745,24016,897,-745
chr2:2328827-2329531	chr2	+	2328874	2329551	True	NR_024468,NM_015025	chr2,chr2	+,-	LOC730811,MYT1L	-5934,5544
chr7:27088307-27089011	chr7	+	27088373	27088889	True	NM_005522,NR_002795	chr7,chr7	-,+	HOXA1,HOXA11-AS1	46789,136137
chr5:140063797-140065677	chr5	+	140064144	140065448	True	NM_012208,NM_002109	chr5,chr5	+,-	HARS2,HARS	5569,5587
chr8:7733216-7734568	chr8	+	7733217	7734261	True	NM_152250,NM_018661,NM_001081551	chr8,chr8,chr8	-,+,+	DEFB105A,DEFB103B,DEFB103A	-51857,4652,4464
chr8:7733216-7734568	chr8	-	7292742	7293378	False	NM_018661,NM_001040703,NM_001081551	chr8,chr8,chr8	-,+,-	DEFB103B,DEFB105B,DEFB103A	-5060,51864,-4872
chr11:61659384-61659880	chr11	+	61659410	61659714	True	NM_001139443,NM_021727	chr11,chr11	+,-	BEST1,FADS3	57641,-404
chr2:207084864-207086568	chr2	+	207084984	207086604	True	NM_001098199,NM_005279,NM_020923	chr2,chr2,chr2	-,-,+	GPR1,GPR1,ZDBF2	-2213,-2213,52918
chr6:2906895-2908786	chr6	+	2907125	2908735	True	NR_026855,NM_004155	chr6,chr6	+,-	DKFZP686I15217,SERPINB9	79465,-3580
chr4:87811199-87813101	chr4	+	87811457	87812794	True	NM_144645,NM_001166693	chr4,chr4	-,+	C4orf36,AFF1	840,43359
chr6:119379796-119380252	chr6	+	119379800	119380065	True	NR_030315,NM_014034	chr6,chr6	-,+	MIR548B,ASF1A	10294,-164610
chr3:197677644-197678071	chr3	+	197677747	197678063	True	NR_026787,NR_026786,NM_001134435,NM_032263,NM_000996,NM_001136049,NM_033029	chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,-,-,+,+,+	LMLN,LMLN,IQCG,IQCG,RPL35A,LMLN,LMLN	9007,9007,-951,8873,-746,9007,9007
chr13:51910688-51911069	chr13	+	51910712	51911058	True	NM_001039937,NM_001101320	chr13,chr13	-,+	INTS6,SERPINE3	116267,4109
chr16:6070864-6071071	chr16	+	6071029	6071109	True	NM_018723,NM_001142333,NM_201598	chr16,chr16,chr16	+,+,-	RBFOX1,RBFOX1,FAM86A	-1948,-1948,-923240
chr12:6644938-6646233	chr12	+	6644942	6646051	True	NM_001039670,NM_002046	chr12,chr12	-,+	IFFO1,GAPDH	19248,-1336
chr1:113711990-113712421	chr1	+	113712019	113712395	True	NM_003051,NM_014813	chr1,chr1	-,+	SLC16A1,LRIG2	-213044,-96243
chr14:104180414-104180922	chr14	+	104180519	104180614	True	NM_024071,NM_005432,NM_001198953,NM_001100118,NM_001100119	chr14,chr14,chr14,chr14,chr14	+,-,+,-,-	ZFYVE21,XRCC3,ZFYVE21,XRCC3,XRCC3	1466,1268,1466,1268,1268
chr1:231112022-231113427	chr1	+	231112114	231113398	True	NM_001122835,NM_022786,NM_024525	chr1,chr1,chr1	-,+,-	TTC13,ARV1,TTC13	1270,1424,1270
chr14:102193653-102194447	chr14	+	102193665	102194335	True	NR_026774,NR_031649	chr14,chr14	+,-	NCRNA00239,MIR1247	2438,-166906
chr3:100341752-100342566	chr3	+	100342075	100342360	True	NM_032787,NM_014820	chr3,chr3	+,-	GPR128,TOMM70A	-13701,-221850
chrX:149009926-149010401	chrX	+	149009940	149010362	True	NM_001166400,NM_001166401,NM_005364,NM_001013845	chrX,chrX,chrX,chrX	+,+,+,-	MAGEA8,MAGEA8,MAGEA8,CXorf40B	-50,-50,-50,96404
chr22:41457567-41458548	chr22	+	41458285	41458572	True	NM_138481,NR_031694	chr22,chr22	-,+	CHADL,MIR1281	178420,29944
chr10:92615951-92616682	chr10	+	92616063	92616635	True	NM_000872,NM_019860,NM_006413,NM_019859	chr10,chr10,chr10,chr10	-,-,+,-	HTR7,HTR7,RPP30,HTR7	1086,1086,15073,1086
chr22:39795468-39795710	chr22	+	39795546	39795752	True	NM_006116,NM_153497,NM_001033853	chr22,chr22,chr22	+,+,-	TAB1,TAB1,RPL3	6,6,-79876
chr17:73630635-73630974	chr17	+	73630653	73631017	True	NR_028439,NM_001162995,NM_004259	chr17,chr17,chr17	+,+,-	LOC643008,LOC643008,RECQL5	1657,-1190,32298
chr17:54266824-54268711	chr17	+	54266825	54267327	True	NM_153228,NM_001099640	chr17,chr17	+,-	ANKFN1,TMEM100	-36040,-457343
chr6:36562187-36562401	chr6	+	36562192	36562448	True	NM_003017,NR_037491,NR_036610	chr6,chr6,chr6	+,-,+	SRSF3,MIR3925,SRSF3	-153,27891,-153
chr8:11220731-11221394	chr8	+	11220856	11221344	True	NR_026814,NM_053279	chr8,chr8	+,-	C8orf12,FAM167A	4566,102982
chr9:37551632-37552543	chr9	+	37551646	37552394	True	NM_022490,NM_012166	chr9,chr9	+,-	POLR1E,FBXO10	-65752,23917
chr4:1893438-1894006	chr4	+	1893702	1894053	True	NM_007331,NM_012318,NM_133330,NM_133331,NM_133334,NM_133335	chr4,chr4,chr4,chr4,chr4,chr4	+,-,+,+,+,+	WHSC1,LETM1,WHSC1,WHSC1,WHSC1,WHSC1	455,-35728,455,455,8299,455
chr4:17576953-17578070	chr4	+	17577426	17577932	True	NM_000320,NM_015907	chr4,chr4	-,+	QDPR,LAP3	-63569,994
chr17:21906669-21906893	chr17	+	21906837	21906917	True	NM_001113434,NR_027084	chr17,chr17	-,+	C17orf51,FLJ36000	-451896,-2826
chr17:21906669-21906893	chr17	+	21904463	21904543	False	NM_001113434,NR_027084	chr17,chr17	-,+	C17orf51,FLJ36000	-449522,-452
chr11:126859648-126860200	chr11	+	126859706	126860122	True	NR_036126,NM_006278	chr11,chr11	-,+	MIR3167,ST3GAL4	-1268,-633661
chr11:105892929-105893147	chr11	+	105893029	105893173	True	NM_032424,NM_015423	chr11,chr11	-,+	KIAA1826,AASDHPPT	-75,55118
chr17:25798732-25799016	chr17	+	25798754	25799004	True	NM_014238,NM_000625	chr17,chr17	+,-	KSR1,NOS2	31,328601
chr10:6243144-6243392	chr10	+	6243168	6243348	True	NM_004566,NM_000417	chr10,chr10	+,-	PFKFB3,IL2RA	1491,-138835
chr14:94387704-94389614	chr14	+	94387918	94389192	True	NM_138344,NR_027004	chr14,chr14	+,-	FAM181A,C14orf86	-2718,3589
chr7:5321660-5322529	chr7	+	5321693	5322086	True	NM_153247,NR_034163,NM_001040661	chr7,chr7,chr7	+,-,+	SLC29A4,ZNF890P,SLC29A4	474,-137516,474
chr7:5321660-5322529	chr7	-	57017489	57017539	False	NR_036270,NR_026929,NR_036246	chr7,chr7,chr7	-,+,-	MIR4283-2,DKFZp434L192,MIR4283-1	6082,-453624,6082
chr7:5321660-5322529	chr7	+	63087500	63087550	False	NR_036270,NR_028349,NR_036246	chr7,chr7,chr7	+,-,+	MIR4283-2,LOC100287834,MIR4283-1	-6083,-228081,-6083
chr13:73633955-73634199	chr13	+	73634020	73634242	True	NM_001730,NM_014953	chr13,chr13	+,-	KLF5,DIS3	-931,-277676
chr19:46524209-46524859	chr19	+	46524241	46524793	True	NR_030412,NM_005091	chr19,chr19	+,-	MIR769,PGLYRP1	-2102,1813
chrX:40594775-40595150	chrX	+	40594932	40595140	True	NM_004229,NM_001195522	chrX,chrX	-,+	MED14,LOC347411	-128,-112165
chr17:1932790-1933004	chr17	+	1932917	1932977	True	NM_178568,NM_001383	chr17,chr17	-,+	RTN4RL1,DPH1	-4739,453
chr1:200995639-200996841	chr1	+	200995726	200996636	True	NM_001142569,NM_017596	chr1,chr1	+,-	C1orf106,KIF21B	-131778,-2898
chr1:99730417-99732007	chr1	+	99730619	99732019	True	NM_014839,NM_001037317,NM_001166252	chr1,chr1,chr1	+,-,+	LPPR4,LPPR5,LPPR4	-822,-260170,-822
chr4:152022925-152024159	chr4	+	152023177	152024012	True	NR_000007,NM_001006,NM_001128924	chr4,chr4,chr4	+,+,-	SNORD73A,RPS3A,SH3D19	966,-2485,72745
chr17:45773557-45773849	chr17	+	45773594	45773872	True	NM_014726,NM_145798	chr17,chr17	+,-	TBKBP1,OSBPL7	-1015,125325
chr12:10959719-10960557	chr12	+	10959725	10960390	True	NM_023918,NM_023919,NM_023917,NM_005042	chr12,chr12,chr12,chr12	-,-,-,+	TAS2R8,TAS2R7,TAS2R9,PRH2	-146,-4499,2439,121443
chr6:109422981-109424101	chr6	+	109423195	109424146	True	NM_014454,NM_001083535	chr6,chr6	-,+	SESN1,CEP57L1	-7487,-6896
chr16:1665064-1666044	chr16	+	1665279	1666083	True	NM_020825,NM_014714	chr16,chr16	+,-	CRAMP1L,IFT140	-691,-3170
chr15:44968247-44969537	chr15	+	44968410	44969568	True	NM_004048,NM_001145112	chr15,chr15	+,-	B2M,PATL2	34116,94
chr11:47505971-47506321	chr11	+	47505972	47506152	True	NM_001025596,NM_152264,NM_198700,NM_001172640	chr11,chr11,chr11,chr11	-,+,-,-	CELF1,SLC39A13,CELF1,CELF1	4474,-75979,9971,4474
chr12:62859094-62859957	chr12	+	62859253	62859995	True	NM_175895,NM_015026	chr12,chr12	-,+	C12orf61,MON2	137269,601
chr13:30948603-30949591	chr13	+	30948701	30949627	True	NM_005800,NR_024464	chr13,chr13	+,-	USPL1,LOC100188949	242202,-665
chr1:151227556-151227932	chr1	+	151227557	151227961	True	NM_005997,NM_002810	chr1,chr1	-,+	VPS72,PSMD4	-64917,-413
chr15:45709095-45710261	chr15	+	45709294	45710265	True	NM_001482,NM_032413	chr15,chr15	-,+	GATM,C15orf48	-38314,12497
chr20:62717247-62718382	chr20	+	62717681	62718355	True	NM_182647,NM_001007125,NM_001039467,NM_001200019,NM_000913,NM_005873	chr20,chr20,chr20,chr20,chr20,chr20	+,-,-,+,+,-	OPRL1,C20orf201,RGS19,OPRL1,OPRL1,RGS19	-6261,-1969,-6357,-1363,-6261,-6836
chr12:53342141-53342434	chr12	+	53342180	53342258	True	NM_199187,NM_000224,NM_002273	chr12,chr12,chr12	+,+,-	KRT18,KRT18,KRT8	396,584,-43312
chr13:103251041-103251876	chr13	+	103251044	103251878	True	NM_003291,NM_001010977	chr13,chr13	+,-	TPP2,METTL21C	-1816,95026
chr17:71640086-71640351	chr17	+	71640152	71640220	True	NM_001144952,NM_017941	chr17,chr17	-,+	SDK2,C17orf80	57,-411427
chr2:85811937-85812729	chr2	+	85811993	85812533	True	NM_003761,NM_001031738,NM_006634	chr2,chr2,chr2	+,-,+	VAMP8,TMEM150A,VAMP5	-7430,17339,-513
chrX:110340072-110341223	chrX	+	110340419	110341230	True	NM_002578,NM_014289	chrX,chrX	+,-	PAK3,CAPN6	-1095,172594
chr1:20145371-20145857	chr1	+	20145664	20145798	True	NM_015207,NM_019062	chr1,chr1	+,-	OTUD3,RNF186	63089,-3893
chr2:219824093-219824436	chr2	+	219824225	219824417	True	NM_003936,NM_017521	chr2,chr2	+,-	CDK5R2,FEV	-20,26012
chr4:130033663-130035382	chr4	+	130033856	130035406	True	NM_001099783,NM_144643	chr4,chr4	+,-	C4orf33,SCLT1	-16635,-19092
chr10:88428719-88429523	chr10	+	88428723	88429411	True	NM_001080115,NM_001080114,NM_001080116,NM_001171611,NM_001171610,NM_007078,NM_015045	chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,+,-	LDB3,LDB3,LDB3,LDB3,LDB3,LDB3,WAPAL	-348,-348,-453,-348,-568,-348,-147182
chr11:133904457-133904863	chr11	+	133904469	133904805	True	NM_014987,NR_027276	chr11,chr11	-,+	IGSF9B,LOC100128239	-77589,-2353
chr2:3606564-3606799	chr2	+	3606606	3606670	True	NM_001011,NM_002936	chr2,chr2	+,-	RPS7,RNASEH1	16182,-666
chr2:242626741-242627033	chr2	+	242626755	242626913	True	NM_012145,NR_033255,NM_001165031,NM_032329	chr2,chr2,chr2,chr2	-,-,-,+	DTYMK,DTYMK,DTYMK,ING5	-372,-372,-372,14542
chr4:49298595-49299189	chr4	+	49298716	49298798	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-310512,-389901
chr4:49298595-49299189	chr4	+	49304852	49304912	False	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-316648,-396037
chr4:49298595-49299189	chr4	-	49320646	49320706	False	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-332442,-411831
chr1:109234309-109234745	chr1	+	109234349	109234665	True	NR_037185,NM_018061,NM_144584	chr1,chr1,chr1	+,+,-	PRPF38B,PRPF38B,HENMT1	269,266,-30201
chr16:67916716-67918518	chr16	+	67916862	67918474	True	NM_006742,NM_014329,NM_025082,NM_198443	chr16,chr16,chr16,chr16	+,+,-,+	PSKH1,EDC4,CENPT,NRN1L	8700,-9914,-35501,306
chr6:66253069-66254228	chr6	+	66253535	66254081	True	NR_026540,NM_198283	chr6,chr6	+,-	MCART3P,EYS	243690,35666
chr7:64765270-64765739	chr7	+	64765560	64765776	True	NM_001007253,NM_007139	chr7,chr7	-,+	ERV3,ZNF92	-298436,72991
chr9:2620131-2621125	chr9	+	2620259	2621132	True	NR_015375,NM_003383,NM_001018056	chr9,chr9,chr9	-,+,+	FLJ35024,VLDLR,VLDLR	1291,660,660
chr7:129253734-129254115	chr7	+	129253785	129253925	True	NR_029614,NM_005011	chr7,chr7	-,+	MIR182,NRF1	156463,-2287
chr14:105551189-105551874	chr14	+	105551228	105551684	True	NM_174891,NM_013345	chr14,chr14	+,-	C14orf79,GPR132	-98663,-19474
chr2:191279387-191280042	chr2	+	191279532	191279950	True	NM_017694,NM_198047	chr2,chr2	+,-	MFSD6,HIBCH	-6509,-94761
chr19:15389268-15389761	chr19	+	15389425	15389591	True	NM_014299,NM_058243,NR_031716	chr19,chr19,chr19	-,-,+	BRD4,BRD4,MIR1470	1723,1723,170767
chr1:249149799-249150035	chr1	+	249149805	249150061	True	NM_001193328,NM_001136036,NM_024836	chr1,chr1,chr1	-,-,+	ZNF692,ZNF692,ZNF672	3304,3114,-17326
chr17:38447898-38448741	chr17	+	38447897	38447971	True	NM_001254,NM_152219	chr17,chr17	+,-	CDC6,GJD3	-3803,73034
chr5:69515290-69517026	chr5	+	69515644	69515714	True	NM_022877,NR_024054	chr5,chr5	+,-	SMN2,LOC100170939	-170345,5958
chr5:69515290-69517026	chr5	+	68935918	68935988	False	NR_027439,NM_001042490	chr5,chr5	-,+	LOC100272216,GTF2H2D	-6890,-79895
chr5:69515290-69517026	chr5	+	70516008	70516078	False	NR_003922,NR_033968	chr5,chr5	+,-	PMCHL2,LOC100049076	155533,39094
chr5:69515290-69517026	chr5	+	69790750	69790820	False	NR_033417,NR_033968	chr5,chr5	+,-	GTF2H2B,LOC100049076	-79604,60380
chr5:69515290-69517026	chr5	+	69812034	69812104	False	NR_033417,NR_033968	chr5,chr5	+,-	GTF2H2B,LOC100049076	-100888,39096
chr2:215306927-215307824	chr2	+	215307257	215307832	True	NM_000465,NM_001080500	chr2,chr2	-,+	BARD1,VWC2L	366646,-30854
chr21:46065776-46066489	chr21	+	46066116	46066434	True	NM_198698,NM_181688,NM_198692	chr21,chr21,chr21	-,+,+	KRTAP12-4,KRTAP10-10,KRTAP10-11	8192,-8900,52
chr3:108838397-108840120	chr3	+	108838451	108839970	True	NM_014429,NR_033977	chr3,chr3	-,+	MORC1,FLJ22763	-1458,15590
chr7:155433486-155434884	chr7	+	155433540	155434855	True	NM_001103176,NM_053043	chr7,chr7	-,+	CNPY1,RBM33	-107001,2347
chr10:8094677-8095415	chr10	+	8094788	8095184	True	NR_024255,NR_024256,NM_002051,NM_001002295	chr10,chr10,chr10,chr10	-,-,+,+	FLJ45983,FLJ45983,GATA3,GATA3	319,319,1482,1482
chr13:103348072-103349044	chr13	+	103348166	103349073	True	NM_003291,NM_001010977	chr13,chr13	+,-	TPP2,METTL21C	-98944,-1312
chr3:45837190-45837560	chr3	+	45837320	45837492	True	NM_006641,NM_020208,NM_022405	chr3,chr3,chr3	+,-,-	CCR9,SLC6A20,SLC6A20	90503,593,593
chr19:44282684-44283470	chr19	+	44282696	44283237	True	NM_181845,NM_002250	chr19,chr19	+,-	ZNF283,KCNN4	48235,2222
chr6:137481743-137482980	chr6	+	137481891	137482915	True	NM_052962,NM_001008783	chr6,chr6	-,+	IL22RA2,SLC35D3	11920,-238541
chr4:71857933-71859163	chr4	+	71858085	71859045	True	NM_002092,NM_000788	chr4,chr4	-,+	GRSF1,DCK	-152458,219
chr7:5000346-5001109	chr7	+	5000373	5001096	True	NM_198403,NR_015449,NM_001100600	chr7,chr7,chr7	-,+,-	MMD2,RNF216L,MMD2	-1529,12519,-1529
chr1:206644799-206645365	chr1	+	206644988	206645297	True	NM_001193321,NM_001193322,NM_014002,NM_001201478	chr1,chr1,chr1,chr1	+,+,+,-	IKBKE,IKBKE,IKBKE,EIF2D	-1453,-1453,-1453,140662
chr12:40479174-40479882	chr12	+	40479211	40479683	True	NM_052885,NM_198578	chr12,chr12	-,+	SLC2A13,LRRK2	20028,139129
chr16:28985426-28985968	chr16	+	28985466	28986002	True	NM_024816,NM_001142448,NM_001142449,NM_001142451,NM_001142450,NM_032038	chr16,chr16,chr16,chr16,chr16,chr16	-,+,+,+,+,+	RABEP2,SPNS1,SPNS1,SPNS1,SPNS1,SPNS1	-48934,93,93,93,93,93
chr1:48230332-48231243	chr1	+	48230378	48230992	True	NM_001194986,NM_004474	chr1,chr1	-,+	LOC388630,FOXD2	231620,-328740
chr17:13973190-13973913	chr17	+	13973344	13973929	True	NM_001007530,NM_001303	chr17,chr17	-,+	CDRT15,COX10	166278,-688
chr18:44701011-44701961	chr18	+	44701076	44701786	True	NM_016097,NM_031303	chr18,chr18	-,+	IER3IP1,KATNAL2	1009,-174347
chr11:64001437-64001637	chr11	+	64001478	64001620	True	NM_031472,NM_057092,NM_001160389,NM_001033678,NM_032344,NM_005528,NM_001160390,NM_003377,NM_001160392,NM_001160393,NM_004470,NM_001128613,NM_001128612,NM_001135208	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,+,-,-,+,+,-,+,-,-,+,+,+,+	TRPT1,FKBP2,TRPT1,TRPT1,NUDT22,DNAJC4,TRPT1,VEGFB,TRPT1,TRPT1,FKBP2,NUDT22,NUDT22,FKBP2	-7752,7967,-7752,-7752,-7791,-3776,-7752,645,-7752,-8137,6792,-7791,-7791,6983
chr6:157800947-157801254	chr6	+	157800946	157801178	True	NM_018452,NM_153746,NM_024630	chr6,chr6,chr6	-,+,+	C6orf35,ZDHHC14,ZDHHC14	-55693,1378,1378
chr16:2527833-2528108	chr16	+	2527869	2528085	True	NM_001199107,NM_006181,NM_020705,NM_001048212	chr16,chr16,chr16,chr16	+,+,+,-	TBC1D24,NTN3,TBC1D24,CEMP1	-2773,-6420,-2773,53374
chr11:123067279-123068146	chr11	+	123067316	123067792	True	NR_027288,NM_024769	chr11,chr11	+,-	LOC341056,CLMP	-179093,-1309
chr4:108633349-108633750	chr4	+	108633355	108633630	True	NM_001136258,NM_005443	chr4,chr4	+,-	SGMS2,PAPSS1	112090,7846
chr2:115246731-115248131	chr2	+	115247133	115248143	True	NR_034130,NM_001178036	chr2,chr2	-,+	LOC100499194,DPP10	-509572,-28004
chr17:7590421-7590757	chr17	+	7590446	7590756	True	NM_001143992,NM_001143991,NM_001143990,NM_018081,NM_000546,NM_001126114,NM_001126112,NM_001126113	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,-,-,-,-	WRAP53,WRAP53,WRAP53,WRAP53,TP53,TP53,TP53,TP53	910,1,-1108,910,157,157,157,157
chr12:49063906-49064902	chr12	+	49063994	49064212	True	NR_029448,NR_002951	chr12,chr12	+,-	LOC255411,SNORA2B	57005,-2618
chr19:21511410-21511639	chr19	+	21511409	21511648	True	NR_027130,NM_021269	chr19,chr19	+,-	ZNF738,ZNF708	30086,615
chr19:14552018-14552239	chr19	+	14552038	14552272	True	NM_005804,NM_213560,NM_002741	chr19,chr19,chr19	-,+,+	DDX39A,PKN1,PKN1	-21843,-1003,-7923
chr3:190951316-190952205	chr3	+	190951444	190952205	True	NM_198184,NM_198152	chr3,chr3	+,-	OSTN,UTS2D	-21185,96170
chr20:36532269-36532604	chr20	+	36532277	36532471	True	NM_080607,NM_014657	chr20,chr20	+,-	VSTM2L,TTI1	-829,129412
chr10:11862166-11862946	chr10	+	11862330	11862675	True	NM_014688,NM_153256	chr10,chr10	-,+	USP6NL,C10orf47	-208651,2721
chr5:140749736-140749974	chr5	+	140749803	140749983	True	NM_018924,NM_032086,NM_032097,NM_032054,NM_018918,NM_018919,NM_005642	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,-	PCDHGB3,PCDHGA6,PCDHGB3,PCDHGA5,PCDHGA5,PCDHGA6,TAF7	4,3667,4,-5956,-5956,3667,-49452
chr16:75465458-75466152	chr16	+	75465550	75466157	True	NM_006324,NM_007285	chr16,chr16	-,+	CFDP1,GABARAPL2	1281,134091
chr12:123942799-123943183	chr12	+	123943008	123943120	True	NM_022717,NM_180699,NM_145058	chr12,chr12,chr12	+,+,-	SNRNP35,SNRNP35,RILPL2	-408,1265,-21744
chr3:113415461-113415726	chr3	+	113415534	113415664	True	NM_001690,NM_001009899	chr3,chr3	+,-	ATP6V1A,KIAA2018	50201,-41
chr11:90018607-90020140	chr11	+	90018800	90020093	True	NM_012124,NM_005467	chr11,chr11	-,+	CHORDC1,NAALAD2	-62268,-151033
chr1:113966566-113967635	chr1	+	113966852	113967430	True	NM_152900,NM_006608	chr1,chr1	+,-	MAGI3,PHTF1	-33428,334401
chr2:145045512-145046691	chr2	+	145045715	145046398	True	NM_001006636,NR_033870	chr2,chr2	-,+	GTDC1,DKFZp686O1327	5719,379135
chr2:70067464-70067711	chr2	+	70067559	70067764	True	NM_178439,NM_152792	chr2,chr2	+,-	GMCL1,ASPRV1	-10793,121688
chr15:75164240-75164894	chr15	+	75164427	75164939	True	NM_005697,NM_002435	chr15,chr15	-,+	SCAMP2,MPI	781,17470
chr18:20714074-20714833	chr18	+	20714079	20714833	True	NR_023359,NM_001100619,NM_032933	chr18,chr18,chr18	+,+,-	CABLES1,CABLES1,C18orf45	-38,893,303142
chr11:57519860-57520424	chr11	+	57520007	57520415	True	NM_001085468,NM_001145101,NM_001331,NM_001085459,NM_001085458,NM_001085462,NM_001085463,NM_001085460,NM_001085461,NM_001085466,NM_001085467,NM_001085464,NM_001085465,NM_001085469	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,-,+,+,+,+,+,+,+,+,+,+,+,+	CTNND1,BTBD18,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1	8818,-754,8818,8818,8818,8818,8818,8818,8818,8818,8818,8818,8818,8818
chr19:49664211-49664701	chr19	+	49664281	49664477	True	NM_001195227,NM_017636,NM_002152	chr19,chr19,chr19	+,+,-	TRPM4,TRPM4,HRC	-3316,-3316,-5600
chr15:64646224-64646825	chr15	+	64646608	64646870	True	NM_022048,NM_016213	chr15,chr15	-,+	CSNK1G1,TRIP4	1622,33132
chr13:77167442-77167712	chr13	+	77167527	77167727	True	NR_026983,NM_138444	chr13,chr13	+,-	BTF3P11,KCTD12	334857,292863
chr13:77167442-77167712	chr11	-	130103133	130103285	False	NM_014155,NM_021978	chr11,chr11	-,+	ZBTB44,ST14	81374,-73512
chr5:72922550-72922752	chr5	+	72922580	72922733	True	NM_001177693,NM_023039,NM_001080479	chr5,chr5,chr5	+,-,+	RGNEF,ANKRA2,RGNEF	-648,-61069,-648
chr22:25435350-25435627	chr22	+	25435353	25435623	True	NM_001001663,NM_001145206	chr22,chr22	-,+	TMEM211,KIAA1671	-100039,-11463
chr14:74890833-74891235	chr14	+	74890865	74891289	True	NM_001105579,NM_194279	chr14,chr14	-,+	TMEM90A,ISCA2	1574,69160
chr5:156485428-156486406	chr5	+	156485727	156486217	True	NM_001099414,NM_012206,NM_001173393,NM_005546	chr5,chr5,chr5,chr5	-,-,-,+	HAVCR1,HAVCR1,HAVCR1,ITK	-240,-240,15,121689
chr9:138533459-138534140	chr9	+	138533663	138533855	True	NM_001001676,NM_182974	chr9,chr9	+,-	LCN9,GLT6D1	21312,-2277
chr1:55357049-55358028	chr1	+	55357135	55358065	True	NM_014762,NM_152607	chr1,chr1	-,+	DHCR24,C1orf177	-4214,-85460
chr19:45062670-45063732	chr19	+	45062964	45063642	True	NM_001205280,NR_027754	chr19,chr19	+,-	LOC147710,CEACAM22P	53297,-2814
chr1:247508567-247509217	chr1	+	247508755	247508901	True	NM_032752,NM_001079821	chr1,chr1	-,+	ZNF496,NLRP3	-13710,70556
chr1:33350748-33351535	chr1	+	33350803	33351261	True	NM_001171941,NM_002143	chr1,chr1	-,+	FNDC5,HPCA	-12721,836
chr12:10224226-10225397	chr12	+	10224304	10225364	True	NM_207345,NM_016511	chr12,chr12	+,-	CLEC9A,CLEC1A	-41083,26295
chr14:74319247-74319480	chr14	+	74319253	74319459	True	NM_152444,NM_001146154,NM_001146155,NM_001043318	chr14,chr14,chr14,chr14	+,+,+,-	PTGR2,PTGR2,PTGR2,C14orf43	-683,-770,-757,-65357
chrX:101985040-101986271	chrX	+	101985248	101986136	True	NM_030639,NM_001142528,NM_021992,NM_001142525,NM_001142524,NM_001142527,NM_001142526	chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,-,+,+,+,+	BHLHB9,BHLHB9,TMSB15A,BHLHB9,BHLHB9,BHLHB9,BHLHB9	-9657,-9657,-213549,-9657,-9657,-9657,-9657
chr17:38983121-38983791	chr17	+	38983123	38983769	True	NM_000421,NM_145274,NM_001195387,NM_001195386	chr17,chr17,chr17,chr17	-,+,+,+	KRT10,TMEM99,TMEM99,TMEM99	-4260,-7807,-7837,-7744
chr6:155057051-155057526	chr6	+	155057084	155057403	True	NM_173515,NM_014892	chr6,chr6	-,+	CNKSR3,SCAF8	-225331,-2623
chrX:133941865-133942501	chrX	+	133941922	133942211	True	NM_001170757,NM_001170781,NM_001170782,NM_001170783,NM_001170779,NM_138819,NM_001170784	chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,+,+	FAM122B,FAM122C,FAM122C,FAM122C,FAM122C,FAM122C,FAM122C	-10660,-750,-768,-750,-750,-750,-768
chr10:13275640-13276668	chr10	+	13275728	13276638	True	NM_145314,NM_182751	chr10,chr10	-,+	UCMA,MCM10	-114,-72225
chr12:3071592-3072318	chr12	+	3071957	3072358	True	NM_003213,NM_202003,NM_201443,NM_201441	chr12,chr12,chr12,chr12	+,-,+,+	TEAD4,FOXM1,TEAD4,TEAD4	-3530,-85654,-3260,-3530
chr8:22501455-22502849	chr8	+	22501646	22502504	True	NR_027715,NM_021174	chr8,chr8	-,+	FLJ14107,KIAA1967	-1924,-39165
chr19:53661056-53661408	chr19	+	53661098	53661382	True	NM_032584,NM_173856,NM_001172674,NM_001172675	chr19,chr19,chr19,chr19	-,+,-,-	ZNF347,VN1R2,ZNF347,ZNF347	990,100162,981,990
chr3:157842071-157842901	chr3	+	157842121	157842758	True	NM_016625,NM_006884	chr3,chr3	+,-	RSRC1,SHOX2	-14288,-18169
chr1:219709342-219709905	chr1	+	219709497	219709876	True	NM_138794,NM_018713	chr1,chr1	+,-	LYPLAL1,SLC30A10	-362363,392174
chr2:47166558-47166911	chr2	+	47166557	47166933	True	NM_001171508,NM_020458,NM_001171511	chr2,chr2,chr2	-,+,-	MCFD2,TTC7A,MCFD2	2111,1379,2111
chr12:26990841-26992072	chr12	+	26991158	26991952	True	NM_002223,NM_001171888	chr12,chr12	-,+	ITPR2,FGFR1OP2	-5027,99352
chr6:26408321-26409725	chr6	+	26408682	26409578	True	NM_194441,NM_001145009,NM_001145008,NM_003543,NM_007048	chr6,chr6,chr6,chr6,chr6	+,+,+,-,+	BTN3A1,BTN3A1,BTN3A1,HIST1H4H,BTN3A1	-6268,-6268,-6268,-122955,-6268
chr1:12910984-12912088	chr1	+	12911036	12911750	True	NM_001013631,NM_023014,NM_001146181	chr1,chr1,chr1	-,+,-	HNRNPCL1,PRAMEF2,LOC649330	-2458,5190,-2799
chr16:69986068-69986329	chr16	+	69986094	69986338	True	NM_001136214,NR_003610,NM_182619	chr16,chr16,chr16	+,-,+	CLEC18A,PDXDC2P,CLEC18A	-1519,113563,-1335
chr16:69986068-69986329	chr16	+	70209006	70209056	False	NR_033959,NM_173619	chr16,chr16	-,+	LOC729513,CLEC18C	50930,-1129
chr16:69986068-69986329	chr16	-	74454283	74454333	False	NM_001011880,NM_002811	chr16,chr16	-,+	CLEC18B,PSMD7	1085,-123661
chr19:45969277-45970353	chr19	+	45969616	45970379	True	NM_001114171,NM_006732,NM_206901	chr19,chr19,chr19	+,+,-	FOSB,FOSB,RTN2	873,873,26145
chr12:123236496-123236892	chr12	+	123236851	123236911	True	NM_032554,NM_003677	chr12,chr12	-,+	GPR81,DENR	-21722,459
chr19:51769411-51770773	chr19	+	51769427	51770790	True	NM_173635,NM_001163922	chr19,chr19	+,-	C19orf75,VSIG10L	-8514,74638
chr11:125458005-125459669	chr11	+	125458391	125459380	True	NM_001612,NM_152713,NM_022549	chr11,chr11,chr11	-,+,-	ACRV1,STT3A,FEZ1	91468,3358,-92185
chr1:201366123-201366491	chr1	+	201366185	201366481	True	NM_005558,NM_001005337	chr1,chr1	-,+	LAD1,PKP1	2238,-113656
chr17:60470157-60471438	chr17	+	60470405	60471287	True	NM_173503,NR_027486	chr17,chr17	+,-	EFCAB3,TBC1D3P2	-12542,-117389
chr17:79482102-79482322	chr17	+	79482256	79482342	True	NM_001077182,NM_001199954,NM_001614,NR_037688	chr17,chr17,chr17,chr17	+,-,-,-	FSCN2,ACTG1,ACTG1,ACTG1	13074,-2364,-2364,-2364
chr2:200819441-200819747	chr2	+	200819503	200819752	True	NM_001039693,NM_024520,NR_004862	chr2,chr2,chr2	-,+,-	C2orf60,C2orf47,C2orf60	758,287,758
chr4:2758286-2758896	chr4	+	2758353	2758587	True	NM_001122681,NM_001161527,NM_024309	chr4,chr4,chr4	+,-,-	SH3BP2,TNIP2,TNIP2	36162,-601,-250
chr3:113667098-113667330	chr3	+	113667177	113667379	True	NM_173570,NM_020817	chr3,chr3	+,-	ZDHHC23,KIAA1407	-480,108131
chr2:62932763-62933030	chr2	+	62932813	62933077	True	NM_198276,NM_001142616,NM_001142614,NM_015252	chr2,chr2,chr2,chr2	-,+,+,+	TMEM17,EHBP1,EHBP1,EHBP1	-199209,-71,954,-71
chr1:226957146-226957465	chr1	+	226957326	226957403	True	NM_002221,NM_000447	chr1,chr1	-,+	ITPKB,PSEN2	-30450,100869
chr12:50616432-50617037	chr12	+	50616526	50616991	True	NM_032901,NM_001113547	chr12,chr12	+,-	C12orf62,LIMA1	-110684,-38
chr10:95460804-95462165	chr10	+	95460902	95461902	True	NM_005097,NM_145246	chr10,chr10	+,-	LGI1,FRA10AC1	55663,477
chr2:39887853-39889380	chr2	+	39887952	39889415	True	NM_152390,NM_001167959,NM_025264	chr2,chr2,chr2	+,+,-	TMEM178,TMEM178,THUMPD2	3619,3222,117051
chr7:84712112-84712880	chr7	+	84712133	84712755	True	NM_000840,NM_152754	chr7,chr7	+,-	GRM3,SEMA3D	1560474,38542
chr7:74684273-74685367	chr7	+	74684865	74685416	True	NM_001003795,NR_003580	chr7,chr7	+,-	GTF2IRD2B,LOC100093631	-176569,-31406
chr7:74684273-74685367	chr7	+	99884839	99884889	False	NM_001004351,NR_028038	chr7,chr7	+,-	SPDYE3,GATS	20435,-14984
chr7:74684273-74685367	chr7	-	72537219	72537770	False	NR_003664,NR_003580	chr7,chr7	-,+	SPDYE8P,LOC100093631	-36910,31241
chr7:74684273-74685367	chr7	+	74899122	74899673	False	NM_001145064,NR_003664	chr7,chr7	-,+	GATSL2,SPDYE8P	-31781,36859
chr7:74684273-74685367	chr7	-	74346713	74347264	False	NM_001025202,NM_001145063	chr7,chr7	-,+	STAG3L2,GATSL1	-39982,31818
chr22:19511209-19511441	chr22	+	19511305	19511375	True	NM_001130861,NM_003277,NM_003504	chr22,chr22,chr22	-,-,+	CLDN5,CLDN5,CDC45	1535,1535,-43940
chr2:43054982-43055199	chr2	+	43055040	43055202	True	NM_020744,NM_012205	chr2,chr2	+,-	MTA3,HAAO	-259420,-35289
chr20:35883986-35884858	chr20	+	35884539	35884683	True	NM_021081,NM_001003897,NM_001184731	chr20,chr20,chr20	-,+,-	GHRH,MANBAL,GHRH	666,33367,666
chr19:23856927-23857299	chr19	+	23857040	23857175	True	NM_138330,NR_003662	chr19,chr19	-,+	ZNF675,RPSAP58	12893,88640
chrY:297654-298017	chrY	+	297668	298002	True	NR_027232,NM_013239	chrY,chrY	+,-	NCRNA00107,PPP2R3B	-66334,8
chrY:297654-298017	chrX	+	347668	348002	False	NR_027232,NM_013239	chrX,chrX	+,-	NCRNA00107,PPP2R3B	-66334,8
chr1:13117918-13119077	chr1	+	13118561	13118633	True	NM_001100631,NM_001013407	chr1,chr1	+,-	PRAMEF22,PRAMEF5	-83080,-810
chr16:28996360-28996566	chr16	+	28996492	28996558	True	NM_001014987,NM_024816,NM_014387,NM_001014989,NM_001014988	chr16,chr16,chr16,chr16,chr16	+,-,+,+,+	LAT,RABEP2,LAT,LAT,LAT	-156,-59960,-156,-396,-156
chr9:124919677-124919963	chr9	+	124919677	124919940	True	NM_198469,NM_014222	chr9,chr9	+,-	MORN5,NDUFA8	2249,2215
chr17:9726472-9727041	chr17	+	9726723	9727085	True	NM_001105571,NM_004246	chr17,chr17	-,+	DHRS7C,GLP2R	-32122,2295
chr16:68055183-68056581	chr16	+	68055260	68056626	True	NM_017803,NM_018380	chr16,chr16	+,-	DUS2L,DDX28	577,1194
chr15:44970128-44971584	chr15	+	44970387	44971123	True	NM_004048,NM_001145112	chr15,chr15	+,-	B2M,PATL2	32561,-1301
chr11:67272978-67273377	chr11	+	67272983	67273423	True	NM_003977,NM_005851,NM_004910,NM_001130848	chr11,chr11,chr11,chr11	+,-,-,-	AIP,CDK2AP2,PITPNM1,PITPNM1	-22529,2729,-140,-140
chr7:6956616-6957713	chr7	+	6956896	6957178	True	NM_198097,NM_173565	chr7,chr7	-,+	C7orf28B,RSPH10B	-90970,-163208
chrX:129629594-129630760	chr10	+	120896056	120896520	False	NR_027141,NM_213649	chr10,chr10	+,-	FAM45B,SFXN4	-32478,28736
chrX:129629594-129630760	chrX	+	129629595	129630567	True	NR_027141,NM_178471	chrX,chrX	+,-	FAM45B,GPR119	-733,-110084
chr16:690973-691430	chr16	+	691135	691195	True	NM_001040165,NM_001040160,NM_032366,NM_001040162,NM_138418,NM_145294,NM_001040161	chr16,chr16,chr16,chr16,chr16,chr16,chr16	-,-,-,-,+,+,-	C16orf13,C16orf13,C16orf13,C16orf13,FAM195A,WDR90,C16orf13	-4788,-4788,-4788,-4788,653,8167,-4788
chr15:45815256-45815996	chr15	+	45815307	45815681	True	NR_022014,NM_013309	chr15,chr15	+,-	HMGN2P46,SLC30A4	-12024,-305
chr5:177422852-177423234	chr5	+	177422948	177423226	True	NM_006261,NM_001079527	chr5,chr5	-,+	PROP1,FAM153C	67,12462
chr14:97402861-97403999	chr14	+	97403037	97404019	True	NM_003384,NM_018036	chr14,chr14	+,-	VRK1,ATG2B	-139404,-573359
chr8:143808138-143808433	chr8	+	143808164	143808380	True	NM_016647,NM_020427	chr8,chr8	+,-	C8orf55,SLURP1	240,15499
chr19:36427805-36428139	chr19	+	36427853	36428081	True	NR_033390,NM_024509	chr19,chr19	-,+	TYROBP,LRFN3	-28642,-4
chr6:31795001-31795509	chr6_qbl_hap6	+	3088656	3088830	False	NM_001040437,NR_002745,NM_005527,NR_002742,NM_005346,NM_001040438	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,SNORD52,HSPA1B,C6orf48	7521,7868,-12174,9678,332,7521
chr6:31795001-31795509	chr6_dbb_hap3	+	3080592	3080766	False	NM_001040437,NR_002745,NM_005527,NR_002742,NM_005346,NM_001040438	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,SNORD52,HSPA1B,C6orf48	7513,7860,-12170,9672,332,7513
chr6:31795001-31795509	chr6	+	31795005	31795179	True	NM_001040437,NR_002745,NM_005527,NR_002742,NM_005346,NM_001040438	chr6,chr6,chr6,chr6,chr6,chr6	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,SNORD52,HSPA1B,C6orf48	7513,7860,-12170,9673,332,7513
chr6:31795001-31795509	chr6_apd_hap1	+	3109769	3109943	False	NM_001040437,NR_002745,NM_005527,NR_002742,NM_005346,NM_001040438	chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,SNORD52,HSPA1B,C6orf48	7503,7850,-12173,9664,332,7503
chr6:31795001-31795509	chr6_cox_hap2	+	3304587	3304761	False	NM_001040437,NR_002745,NM_005527,NR_002742,NM_005346,NM_001040438	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,SNORD52,HSPA1B,C6orf48	7507,7854,-12172,9665,332,7507
chr10:37410379-37410972	chr10	+	37410657	37410892	True	NM_052997,NM_001190489	chr10,chr10	+,-	ANKRD30A,MTRNR2L7	3892,481022
chr9:19256473-19256788	chr9	+	19256699	19256763	True	NM_001010,NM_017925	chr9,chr9	-,+	RPS6,DENND4C	123524,33985
chr4:87285826-87286507	chr4	+	87286173	87286340	True	NM_138982,NM_006264,NM_138980	chr4,chr4,chr4	-,+,-	MAPK10,PTPN13,MAPK10	-4798,229127,-4798
chr16:4841272-4841614	chr16	+	4841303	4841591	True	NR_029454,NR_029455,NR_029453,NM_001154458,NM_144605	chr16,chr16,chr16,chr16,chr16	+,+,+,-,-	LOC440335,LOC440335,LOC440335,SEPT12,SEPT12	-2897,3787,-2956,-2904,-2904
chr19:5689064-5689945	chr19	+	5689244	5689994	True	NM_205767,NM_198708,NM_033643,NM_198533,NM_015414,NM_198706,NM_198707,NM_198704,NM_198705	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,+,+,+,+,+,+,+,+	C19orf70,HSD11B1L,RPL36,HSD11B1L,RPL36,HSD11B1L,HSD11B1L,HSD11B1L,HSD11B1L	-8333,-8227,277,-8255,351,-8227,-8250,-8267,-8267
chr7:74285695-74285967	chr7	+	74285699	74285799	True	NM_173537,NR_027775	chr7,chr7	-,+	GTF2IRD2,PMS2P5	-17858,21094
chr7:74285695-74285967	chr7	-	74490227	74490313	False	NM_030798,NM_001003795	chr7,chr7	-,+	WBSCR16,GTF2IRD2B	-528,18033
chr4:152199047-152199873	chr4	+	152199273	152199757	True	NM_183375,NM_001128923	chr4,chr4	+,-	PRSS48,SH3D19	-1007,-51613
chr4:70822445-70824022	chr4	+	70822939	70824047	True	NM_001891,NM_001890	chr4,chr4	-,+	CSN2,CSN1S1	2732,-26202
chr8:96280625-96280900	chr8	+	96280763	96280861	True	NM_177965,NM_024613	chr8,chr8	-,+	C8orf37,PLEKHF2	651,-134865
chr3:126195078-126195347	chr3	+	126195143	126195363	True	NM_001040653,NM_025112,NM_152889	chr3,chr3,chr3	-,-,+	ZXDC,ZXDC,CHST13	-381,-381,47812
chr19:7068780-7069217	chr19	+	7068917	7069211	True	NM_001044388,NM_024341,NM_001164425,NM_001044387	chr19,chr19,chr19,chr19	+,+,-,+	ZNF557,ZNF557,MBD3L3,ZNF557	259,259,-10272,259
chr11:62479131-62480476	chr11	+	62479134	62480435	True	NM_001130702,NR_037949,NR_037948,NM_001122955,NM_012202,NM_032667	chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,+,-	BSCL2,BSCL2,BSCL2,BSCL2,GNG3,BSCL2	-5347,-2043,-2043,-3955,-4072,-5347
chr12:15081286-15082094	chr12	+	15081286	15082138	True	NM_006205,NM_152321	chr12,chr12	+,-	PDE6H,ERP27	43817,9375
chrX:70756304-70757111	chrX	+	70756309	70756627	True	NM_181672,NM_181673,NR_002226	chrX,chrX,chrX	+,+,-	OGT,OGT,INGX	-3448,-3448,-43705
chr6:153304134-153304367	chr6	+	153304157	153304285	True	NM_194435,NM_012177,NM_001142522	chr6,chr6,chr6	+,-,-	VIP,FBXO5,FBXO5	-232277,-4,505
chr6:42712450-42712833	chr6	+	42712553	42712876	True	NM_003192,NR_037141	chr6,chr6	-,+	TBCC,LOC442211	1058,-17299
chr8:48649432-48649773	chr8	+	48649529	48649755	True	NM_005914,NM_005195	chr8,chr8	+,-	MCM4,CEBPD	223007,1021
chr20:58510717-58511531	chr20	+	58510954	58511546	True	NM_022106,NM_001190827,NM_006242,NM_001190826,NM_014258	chr20,chr20,chr20,chr20,chr20	+,+,-,+,-	C20orf177,C20orf177,PPP1R3D,C20orf177,SYCP2	3897,3897,3856,-2194,-3745
chr17:73151646-73152174	chr17	+	73151652	73151762	True	NM_016185,NM_001002032,NM_001002033,NM_024585	chr17,chr17,chr17,chr17	-,-,-,+	HN1,HN1,HN1,ARMC7	-877,-878,-878,-45634
chr7:141842896-141843574	chr7	+	141843004	141843620	True	NR_024346,NR_003717	chr7,chr7	-,+	MOXD2P,LOC100124692	103316,27349
chr15:93114559-93115154	chr15	+	93114614	93115152	True	NR_021493,NM_153040	chr15,chr15	-,+	LOC100144604,C15orf32	391,-99758
chr5:83678198-83678774	chr5	+	83678239	83678819	True	NM_005711,NM_004385	chr5,chr5	-,+	EDIL3,VCAN	1842,-910797
chr10:115406789-115407208	chr10	+	115406843	115407177	True	NM_006175,NM_033340	chr10,chr10	-,+	NRAP,CASP7	16678,31757
chr22:18041204-18041953	chr22	+	18041756	18041841	True	NM_031481,NM_001039366	chr22,chr22	+,-	SLC25A18,ATP6V1E1	1341,69806
chr22:18041204-18041953	chr1	+	145168186	145168271	False	NM_203458,NM_022359	chr1,chr1	+,-	NOTCH2NL,PDE4DIP	40839,-92000
chr22:18041204-18041953	chr1	-	120651470	120651555	False	NM_001200001,NM_001100910	chr1,chr1	-,+	NOTCH2,FAM72B	-39153,187449
chr10:118963341-118964665	chr10	+	118964022	118964714	True	NR_037436,NM_181840	chr10,chr10	-,+	MIR3663,KCNK18	-36737,-7080
chr9:139890047-139891158	chr9	+	139890120	139890996	True	NM_004669,NM_183241	chr9,chr9	-,+	CLIC3,C9orf142	78,-3301
chr17:72732274-72732527	chr17	+	72732399	72732477	True	NM_001163989,NM_001163990,NM_001006638,NM_139018	chr17,chr17,chr17,chr17	+,+,+,-	RAB37,RAB37,RAB37,CD300LF	481,878,878,-23291
chr5:146611965-146613787	chr5	+	146612204	146613826	True	NM_181678,NM_145001,NM_001112724	chr5,chr5,chr5	-,+,+	PPP2R2B,STK32A,STK32A	-151171,752,752
chr6:26975885-26976938	chr6	+	26976270	26976602	True	NR_026775,NR_026776	chr6,chr6	+,-	NCRNA00240,LOC100270746	-51549,11533
chr11:67292100-67292812	chr11	+	67292311	67292801	True	NM_003977,NM_016366	chr11,chr11	+,-	AIP,CABP2	-41857,-1412
chr3:186480784-186482434	chr3	+	186481401	186482060	True	NM_001967,NM_002916	chr3,chr3	+,-	EIF4A2,RFC4	19300,42281
chr15:66163200-66164450	chr15	+	66163319	66164077	True	NM_004663,NM_005848	chr15,chr15	+,-	RAB11A,DENND4A	-1574,-78688
chr3:47424269-47424508	chr3	+	47424464	47424530	True	NM_012235,NM_015466	chr3,chr3	-,+	SCAP,PTPN23	92967,-2024
chr9:99482723-99483207	chr9	+	99482829	99483243	True	NM_014930,NR_026792	chr9,chr9	-,+	ZNF510,LOC441455	57135,4859
chr3:97682988-97683394	chr3	+	97683010	97683216	True	NM_032778,NM_001042533,NM_153182,NM_054106	chr3,chr3,chr3,chr3	-,-,-,+	MINA,MINA,MINA,OR5AC2	8060,8060,8131,122800
chr11:89224772-89225012	chr11	+	89224975	89225049	True	NM_001143836,NM_153696,NM_016931,NR_026571	chr11,chr11,chr11,chr11	-,+,-,-	NOX4,FOLH1B,NOX4,NOX4	-322,167415,-322,-322
chr9:139941685-139943236	chr9	+	139941798	139943161	True	NM_207511,NM_001246,NM_203468,NM_015392	chr9,chr9,chr9,chr9	+,-,-,-	C9orf139,ENTPD2,ENTPD2,NPDC1	-19933,5394,5394,-1122
chr7:30180953-30182027	chr7	+	30181057	30182033	True	NM_017946,NM_152793	chr7,chr7	-,+	FKBP14,C7orf41	-114789,-6557
chr16:55801418-55802892	chr16	+	55801882	55802821	True	NR_003276,NM_001025194	chr16,chr16	+,-	CES1P1,CES1	-7422,64305
chr1:226250611-226250814	chr1	+	226250615	226250679	True	NM_152608,NM_002107,NR_002315	chr1,chr1,chr1	-,+,+	C1orf55,H3F3A,LOC440926	-63549,-258,-238
chr5:42423613-42423945	chr5	+	42423630	42423859	True	NM_001085486,NM_000163	chr5,chr5	-,+	SEPP1,GHR	388215,166
chr18:29248683-29250577	chr18	+	29248994	29250620	True	NM_004775,NM_000371	chr18,chr18	-,+	B4GALT6,TTR	14116,-77325
chr1:182558873-182559193	chr1	+	182558936	182559192	True	NR_036490,NM_021133	chr1,chr1	+,-	LOC284648,RNASEL	25082,-542
chr5:179332281-179333398	chr5	+	179332287	179333444	True	NM_015043,NM_003900,NM_198868	chr5,chr5,chr5	-,+,-	TBC1D9B,SQSTM1,TBC1D9B	1462,-84496,1462
chr3:170138590-170139039	chr3	+	170138622	170139075	True	NM_005602,NM_020949,NM_001185056	chr3,chr3,chr3	+,-,+	CLDN11,SLC7A14,CLDN11	-2023,164838,-30
chr9:93403689-93405122	chr9	+	93404082	93404871	True	NM_017594,NM_001135052	chr9,chr9	-,+	DIRAS2,SYK	287,159140
chr10:127262560-127263062	chr10	+	127262708	127263101	True	NR_023362,NM_001128202	chr10,chr10	+,-	LOC100169752,C10orf122	9,108663
chr19:18263422-18263873	chr19	+	18263435	18263883	True	NM_002866,NM_005027	chr19,chr19	-,+	RAB3A,PIK3R2	51041,132
chrX:106149275-106151228	chrX	+	106149281	106151264	True	NM_001171706,NM_138382,NM_001171092	chrX,chrX,chrX	-,-,+	RIPPLY1,RIPPLY1,CLDN2	-2720,-2720,-5938
chr8:132915799-132916277	chr8	+	132915803	132916181	True	NM_015137,NM_001080399	chr8,chr8	+,-	EFR3A,OC90	174,155496
chr18:61329953-61331230	chr18	+	61330297	61331255	True	NM_080475,NM_006919	chr18,chr18	+,-	SERPINB11,SERPINB3	38938,-1100
chr12:123186781-123187164	chr12	+	123186835	123187201	True	NM_003677,NM_177551	chr12,chr12	+,-	DENR,GPR109A	50169,753
chr12:123186781-123187164	chr12	+	123200355	123200655	False	NM_006018,NM_003677	chr12,chr12	-,+	GPR109B,DENR	834,36715
chr6:137242958-137243171	chr6	+	137242979	137243039	True	NR_027994,NM_001008783	chr6,chr6	-,+	NHEG1,SLC35D3	71379,362
chr5:139493070-139493455	chr5	+	139493081	139493347	True	NM_005859,NM_013983	chr5,chr5	+,-	PURA,NRG2	360,-70197
chr10:116415902-116417833	chr10	+	116416257	116417764	True	NM_020940,NM_002313	chr10,chr10	+,-	FAM160B1,ABLIM1	163738,344
chr6:89915504-89916630	chr6	+	89915553	89916679	True	NM_001010853,NM_002042	chr6,chr6	+,-	PM20D2,GABRR1	-59835,10867
chr2:45168999-45169462	chr2	+	45169262	45169338	True	NM_005413,NM_016932	chr2,chr2	+,-	SIX3,SIX2	-276,67254
chr2:231983120-231983451	chr2	+	231983125	231983489	True	NM_000867,NR_034059	chr2,chr2	-,+	HTR2B,PSMD1	6393,-61604
chr5:151152698-151153298	chr5	+	151152788	151153338	True	NM_005754,NM_198395,NM_004045	chr5,chr5,chr5	+,+,-	G3BP1,G3BP1,ATOX1	-1364,-1364,-14578
chr20:62795479-62795686	chr20	+	62795478	62795668	True	NM_004535,NM_005286	chr20,chr20	+,-	MYT1,NPBWR2	158,-57294
chr1:10268505-10268996	chr1	+	10268736	10268948	True	NM_015074,NM_004401,NM_183416	chr1,chr1,chr1	+,-,+	KIF1B,DFFA,KIF1B	1815,263715,1815
chr11:8941477-8943264	chr11	+	8941492	8943158	True	NM_020642,NM_005418,NM_182901	chr11,chr11,chr11	+,-,+	C11orf17,ST5,C11orf17	-8847,-8994,-8746
chr5:96236539-96237547	chr5	+	96236686	96237585	True	NM_001198541,NM_022350	chr5,chr5	-,+	ERAP1,ERAP2	-86838,-25093
chrX:8767874-8768554	chrX	+	8768086	8768336	True	NM_174951,NM_001001888,NM_001171186	chrX,chrX,chrX	-,+,-	FAM9A,VCX3B,FAM9A	1138,-335266,1092
chrX:8767874-8768554	chrX	+	8767113	8767221	False	NM_174951,NM_001001888,NM_001171186	chrX,chrX,chrX	-,+,-	FAM9A,VCX3B,FAM9A	2253,-334294,2207
chr20:62612703-62613616	chr20	+	62612748	62613514	True	NM_080621,NM_012469	chr20,chr20	-,+	SAMD10,PRPF6	-1753,-368
chr14:63590259-63590897	chr14	+	63590259	63590913	True	NM_172376,NM_020663	chr14,chr14	-,+	KCNH5,RHOJ	-21675,80231
chr2:29297837-29298628	chr2	+	29297837	29298439	True	NM_001029883,NM_024692	chr2,chr2	-,+	C2orf71,CLIP4	-710,39868
chr14:24782097-24783066	chr14	+	24782102	24783111	True	NM_001164692,NM_019839,NM_181657,NM_001143919,NM_014430	chr14,chr14,chr14,chr14,chr14	+,+,+,+,-	LTB4R2,LTB4R2,LTB4R,LTB4R,CIDEB	-2796,-2796,6,-1448,-1526
chr12:45270826-45271065	chr12	+	45270875	45271110	True	NM_001025356,NM_001145108,NM_001145109,NM_006159,NM_001145107	chr12,chr12,chr12,chr12,chr12	+,-,-,-,-	ANO6,NELL2,NELL2,NELL2,NELL2	338659,-628,-1431,-628,-242
chr19:46272242-46272558	chr19	+	46272311	46272463	True	NM_175875,NM_017659	chr19,chr19	-,+	SIX5,QPCTL	84,-76621
chr2:233877381-233877875	chr2	+	233877381	233877803	True	NM_005383,NM_019850	chr2,chr2	+,-	NEU2,NGEF	19578,198
chr16:30710398-30710612	chr16	+	30710492	30710646	True	NM_001014979,NM_006662	chr16,chr16	-,+	C16orf93,SRCAP	62969,-81
chr8:7686202-7686646	chr8	+	7686286	7686697	True	NM_080389,NM_001040702,NM_001040703,NM_001040704,NM_152250,NM_152251	chr8,chr8,chr8,chr8,chr8,chr8	+,+,-,+,-,+	DEFB104A,DEFB104B,DEFB105B,DEFB106B,DEFB105A,DEFB106A	7295,7295,-4926,-3648,-4926,-3648
chr8:7686202-7686646	chr8	-	7339938	7340314	False	NM_080389,NM_001040702,NM_001040703,NM_001040704,NM_152250,NM_152251	chr8,chr8,chr8,chr8,chr8,chr8	-,-,+,-,+,-	DEFB104A,DEFB104B,DEFB105B,DEFB106B,DEFB105A,DEFB106A	-7334,-7334,4928,3650,4928,3650
chr11:124622300-124622786	chr11	+	124622334	124622832	True	NM_138961,NM_006176,NM_014312	chr11,chr11,chr11	-,+,-	ESAM,NRGN,VSIG2	9441,-12556,-225
chr22:25206711-25207394	chr22	+	25206739	25207337	True	NM_001098498,NM_001008496,NM_001098497,NM_001039948,NM_133454	chr22,chr22,chr22,chr22,chr22	+,-,+,+,+	SGSM1,PIWIL3,SGSM1,SGSM1,SGSM1	-4654,-36056,-4654,-4654,-4654
chr19:39968803-39969891	chr19	+	39969205	39969453	True	NM_001001563,NM_001020	chr19,chr19	+,-	TIMM50,RPS16	1598,-42587
chr7:107202344-107203110	chr7	+	107202496	107203132	True	NM_001161520,NM_181733,NM_006348,NM_181581	chr7,chr7,chr7,chr7	-,-,-,+	COG5,COG5,COG5,DUS4L	1877,1877,1877,1299
chr4:156598858-156599766	chr4	+	156599313	156599815	True	NM_001130684,NM_017419	chr4,chr4	+,-	GUCY1A3,ACCN5	-10569,187662
chr1:206510758-206511437	chr1	+	206510917	206511477	True	NM_001042758,NM_015326,NM_001007544,NM_001170637	chr1,chr1,chr1,chr1	+,+,-,+	SRGAP2,SRGAP2,C1orf186,SRGAP2	4722,4722,-222270,4722
chr1:206510758-206511437	chr1	+	144048211	144048407	False	NM_207418,NR_034178	chr1,chr1	-,+	FAM72D,SRGAP2P2	-135068,-132516
chr19:9541579-9542790	chr19	+	9541598	9542568	True	NM_198058,NM_006631,NM_001172651	chr19,chr19,chr19	-,-,+	ZNF266,ZNF266,ZNF177	3716,3716,-54657
chr8:41346220-41347793	chr8	+	41346219	41347737	True	NM_001174124,NM_016099,NM_152568,NM_001002296	chr8,chr8,chr8,chr8	+,+,-,+	GOLGA7,GOLGA7,NKX6-3,GOLGA7	343,343,157191,435
chr3:195310626-195311589	chr3	+	195310754	195311574	True	NM_001647,NR_003265	chr3,chr3	-,+	APOD,SDHAP2	-88,73335
chr12:111052408-111052950	chr12	+	111052407	111052634	True	NM_139283,NM_001082538,NM_001082537,NM_024549,NM_001173976,NM_001173975	chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,+,+,+	PPTC7,TCTN1,TCTN1,TCTN1,TCTN1,TCTN1	-31343,-628,-628,-628,-628,-548
chr5:175964422-175964713	chr5	+	175964438	175964738	True	NM_001171976,NM_014901	chr5,chr5	+,-	CDHR2,RNF44	4773,-17
chr19:57334196-57335003	chr19	+	57334199	57335051	True	NM_001146186,NR_023847	chr19,chr19	-,+	PEG3,PEG3-AS1	1373,-10402
chr18:67871817-67872724	chr18	+	67871918	67872718	True	NM_173630,NM_004232	chr18,chr18	-,+	RTTN,SOCS6	294,83418
chr10:93389084-93390190	chr10	+	93389371	93390221	True	NM_025235,NM_005398	chr10,chr10	+,-	TNKS2,PPP1R3C	167929,2688
chr1:37923003-37923306	chr1	+	37923040	37923303	True	NM_022756,NM_025079	chr1,chr1	-,+	MEAF6,ZC3H12A	57112,16815
chr22:30921610-30922274	chr22	+	30922013	30922323	True	NM_174977,NM_001193336,NM_000355	chr22,chr22,chr22	-,-,+	SEC14L4,LOC730005,TCN2	-20315,20396,80746
chr1:28759046-28760127	chr1	+	28759169	28759947	True	NM_023923,NR_003077	chr1,chr1	+,-	PHACTR4,SNORD99	4713,145437
chr13:36941286-36941849	chr13	+	36941446	36941882	True	NM_001111046,NM_001142294	chr13,chr13	+,-	CCNA1,SPG20	64084,2485
chr1:93251695-93252452	chr1	+	93251736	93252486	True	NM_005665,NM_000969	chr1,chr1	-,+	EVI5,RPL5	5527,45107
chr17:7146615-7148064	chr17	+	7146619	7148099	True	NM_015343,NM_007278,NM_004422,NM_203415,NM_203414,NM_203413,NM_015362,NM_001143775,NM_024297	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,+,+,+,+,-,-	CTDNEP1,GABARAP,DVL2,C17orf81,C17orf81,C17orf81,C17orf81,CTDNEP1,PHF23	7212,-866,-8756,7272,7451,7451,7451,6948,-3794
chr11:103908203-103908554	chr11	+	103908253	103908581	True	NM_025208,NM_001001711	chr11,chr11	-,+	PDGFD,DDI1	126496,-997
chr1:234492891-234494873	chr1	+	234492938	234494874	True	NM_001012985,NM_005646	chr1,chr1	+,-	C1orf31,TARBP1	14554,120025
chr11:119076307-119076725	chr11	+	119076313	119076621	True	NM_001145018,NM_005188	chr11,chr11	-,+	CCDC153,CBL	-9729,368
chrX:18241049-18241837	chrX	+	18241303	18241753	True	NM_153346,NM_001184767,NM_003159	chrX,chrX,chrX	-,-,+	BEND2,BEND2,CDKL5	-2279,-2279,201971
chr22:38593981-38594573	chr22	+	38594179	38594484	True	NM_001161573,NM_001161572,NM_001161574,NM_012323,NM_001199562	chr22,chr22,chr22,chr22,chr22	+,+,+,+,-	MAFF,MAFF,MAFF,MAFF,PLA2G6	4542,3454,3454,3454,-16343
chr21:30364515-30365055	chr21	+	30364628	30364992	True	NM_015565,NM_001001992	chr21,chr21	-,+	LTN1,USP16	335,31945
chr12:110437934-110438363	chr12	+	110437954	110438356	True	NM_057169,NM_014776,NM_033121,NM_057170,NM_001135213,NM_139201,NM_001135214	chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,-,+,-,-,-,-	GIT2,GIT2,ANKRD13A,GIT2,GIT2,GIT2,GIT2	-3760,-3760,-777,-3760,-3760,-3760,-3760
chr11:130319712-130320105	chr11	+	130319826	130319964	True	NM_007037,NM_139055	chr11,chr11	-,+	ADAMTS8,ADAMTS15	-21287,-1008
chr11:60263310-60264959	chr11	+	60263348	60265000	True	NM_022349,NM_017716,NM_001164470	chr11,chr11,chr11	-,+,+	MS4A6A,MS4A12,MS4A12	-312674,-3148,-3148
chr11:57229278-57229631	chr11	+	57229398	57229670	True	NM_017611,NM_178570	chr11,chr11	-,+	SLC43A3,RTN4RL2	-34345,-1110
chr22:25056285-25057192	chr22	+	25056473	25056587	True	NR_024593,NR_024494	chr22,chr22	-,+	POM121L10P,BCRP3	-1359,-27648
chr16:25705233-25706214	chr16	+	25705288	25706093	True	NM_001012981,NM_006040	chr16,chr16	-,+	ZKSCAN2,HS3ST4	-436433,-2000
chr4:154123978-154125011	chr4	+	154124277	154124686	True	NR_001562,NM_015271	chr4,chr4	-,+	ANXA2P1,TRIM2	105334,911
chr20:32270154-32271111	chr20	+	32270203	32270833	True	NM_001024675,NM_005225,NM_031232,NM_031231	chr20,chr20,chr20,chr20	+,-,-,-	C20orf134,E2F1,NECAB3,NECAB3	-15950,3427,-7939,-7939
chr10:134600558-134600758	chr10	+	134600594	134600654	True	NM_005539,NM_177400	chr10,chr10	+,-	INPP5A,NKX6-2	-249292,-1057
chr19:9895384-9895818	chr19	+	9895423	9895817	True	NM_001048241,NM_001077624	chr19,chr19	+,-	UBL5,ZNF846	42750,-16013
chr2:224471016-224471399	chr2	+	224471107	224471399	True	NM_022915,NM_003469	chr2,chr2	+,-	MRPL44,SCG2	350721,-3890
chr1:24281420-24282624	chr1	+	24281556	24282592	True	NM_001191006,NM_017761	chr1,chr1	-,+	SRSF10,PNRC2	24411,3708
chr12:50416337-50417407	chr12	+	50416408	50417127	True	NM_001126103,NM_001126104,NM_001095,NM_013277	chr12,chr12,chr12,chr12	-,-,+,-	RACGAP1,RACGAP1,ACCN2,RACGAP1	2241,2241,34359,2241
chr1:11338105-11338558	chr1	+	11338345	11338597	True	NM_004958,NM_013319	chr1,chr1	-,+	MTOR,UBIAD1	-15737,-5141
chr7:139043889-139044152	chr7	+	139043983	139044105	True	NM_016019,NR_033999	chr7,chr7	+,-	LUC7L2,LOC100129148	528,68217
chr4:42659534-42659789	chr4	+	42659585	42659647	True	NM_001080476,NM_001105529,NM_006095	chr4,chr4,chr4	+,-,-	GRXCR1,ATP8A1,ATP8A1	235635,-463,-463
chr16:21966741-21967237	chr16	+	21966747	21967138	True	NM_173806,NM_003366	chr16,chr16	-,+	PDZD9,UQCRC2	45352,-2189
chr22:50525482-50526075	chr22	+	50525784	50526054	True	NM_139202,NM_018995,NM_015166,NM_001164105,NM_001164104	chr22,chr22,chr22,chr22,chr22	-,+,-,+,+	MLC1,MOV10L1,MLC1,MOV10L1,MOV10L1	-2003,2380,-1426,2630,2380
chr9:35116553-35116999	chr9	+	35116562	35117012	True	NM_006377,NM_025182	chr9,chr9	+,-	UNC13B,KIAA1539	44976,-669
chr11:65667242-65667563	chr11	+	65667322	65667496	True	NM_005438,NM_006848	chr11,chr11	-,+	FOSL1,CCDC85B	551,-9498
chr5:109026608-109026887	chr5	+	109026668	109026854	True	NM_014819,NM_002372	chr5,chr5	-,+	PJA2,MAN2A1	-280993,-1563
chr22:45707240-45708477	chr22	+	45707265	45708107	True	NM_017911,NM_001009880,NM_001104595	chr22,chr22,chr22	+,-,+	FAM118A,KIAA0930,FAM118A	-1531,-70615,-2235
chr11:46721175-46721441	chr11	+	46721267	46721412	True	NM_004308,NM_001184751,NM_024741	chr11,chr11,chr11	-,+,+	ARHGAP1,ZNF408,ZNF408	759,1231,904
chr8:133067226-133067904	chr8	+	133067238	133067898	True	NM_001080399,NM_015137	chr8,chr8	-,+	OC90,EFR3A	3779,-150933
chr16:29826677-29827153	chr16	+	29827136	29827200	True	NM_017458,NM_024516,NM_005115,NM_006319,NM_145239,NM_001042539,NM_002383	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,-,+,+,+	MVP,C16orf53,MVP,CDIPT,PRRT2,MAZ,MAZ	4514,327,4514,47428,-3779,-9333,-9333
chr2:87142053-87143718	chr2	+	87142412	87143434	True	NM_001078170,NM_004931,NM_001024457	chr2,chr2,chr2	+,-,+	RGPD2,CD8B,RGPD1	-1533,-53365,1303
chr2:87142053-87143718	chr2	+	87132836	87133772	False	NM_001078170,NM_004931	chr2,chr2	+,-	RGPD2,CD8B	7162,-43789
chr2:87142053-87143718	chr2	-	88286609	88287545	False	NM_198274,NM_001024457	chr2,chr2	+,-	SMYD1,RGPD1	79753,-1300
chr6:7911212-7911601	chr6	+	7911312	7911548	True	NR_027712,NM_001145549,NM_030810	chr6,chr6,chr6	+,-,-	PIP5K1P1,TXNDC5,TXNDC5	74786,-1002,-265
chr19:57971671-57973248	chr19	+	57971877	57972496	True	NM_020633,NM_001023561	chr19,chr19	-,+	VN1R1,ZNF749	-3770,-25235
chr14:60863036-60864664	chr14	+	60863052	60864702	True	NM_007374,NM_174978	chr14,chr14	+,-	SIX6,C14orf39	111235,88112
chrX:48685983-48686527	chrX	+	48686057	48686425	True	NM_181532,NM_013271	chrX,chrX	+,-	ERAS,PCSK1N	857,7585
chr19:35221748-35222638	chr19	+	35221979	35222627	True	NM_001029997,NM_001007248,NM_001145665	chr19,chr19,chr19	+,-,+	ZNF181,ZNF599,ZNF181	2852,41557,2852
chrX:2923383-2923709	chrX	+	2923691	2923751	True	NM_000047,NM_001011719	chrX,chrX	-,+	ARSE,ARSH	-41197,902
chr9:5821588-5821973	chr9	+	5821665	5821977	True	NM_024896,NM_005511	chr9,chr9	-,+	ERMP1,MLANA	11154,68931
chr7:134853831-134854345	chr7	+	134853837	134854331	True	NM_018295,NR_024186,NR_024185,NM_024033	chr7,chr7,chr7,chr7	+,-,-,-	TMEM140,C7orf49,C7orf49,C7orf49	-21122,1251,1251,1251
chr4:99064408-99064610	chr4	+	99064456	99064576	True	NM_174952,NM_001100426	chr4,chr4	-,+	C4orf37,RAP1GDS1	-65,117950
chr22:39097365-39097980	chr22	+	39097365	39097767	True	NM_014876,NM_004286	chr22,chr22	-,+	JOSD1,GTPBP1	-906,4039
chr3:43731840-43732096	chr3	+	43731852	43732094	True	NM_001204834,NM_016006	chr3,chr3	-,+	ANO10,ABHD5	-68292,280
chr6:105406020-105406449	chr6	+	105406201	105406498	True	NM_001004317,NM_020771	chr6,chr6	+,-	LIN28B,HACE1	-1329,-98407
chr20:30312160-30312808	chr20	+	30312395	30312596	True	NM_012112,NM_138578,NM_001191	chr20,chr20,chr20	+,-,-	TPX2,BCL2L1,BCL2L1	14307,-1739,-1739
chr16:21166834-21167711	chr16	+	21166976	21167306	True	NM_020422,NM_017539	chr16,chr16	+,-	TMEM159,DNAH3	2605,3506
chr7:66205114-66205436	chr7	+	66205225	66205483	True	NR_003934,NM_014504	chr7,chr7	-,+	LOC729156,RABGEF1	104380,159
chr7:25165300-25166634	chr7	+	25165307	25166682	True	NM_018947,NM_016447	chr7,chr7	-,+	CYCS,MPP6	-327,-552273
chrY:16636289-16636564	chrY	+	16636374	16636564	True	NR_028318,NR_028319,NM_004679,NM_014893	chrY,chrY,chrY,chrY	+,+,-,+	NLGN4Y,NLGN4Y,VCY,NLGN4Y	-1937,5,-537982,-799
chr17:72733440-72733728	chr17	+	72733469	72733529	True	NM_001163989,NM_001163990,NM_001006638,NM_139018	chr17,chr17,chr17,chr17	+,+,+,-	RAB37,RAB37,RAB37,CD300LF	-561,-164,-164,-24361
chrX:51638999-51639838	chrX	+	51639084	51639824	True	NM_001005333,NR_003711,NM_006986	chrX,chrX,chrX	+,-,+	MAGED1,SNORA11D,MAGED1	-2437,166795,-2437
chr17:34432747-34434081	chr17	+	34433043	34434120	True	NM_002984,NM_002983	chr17,chr17	+,-	CCL4,CCL3	-1875,-15537
chr8:42064017-42065098	chr8	+	42064080	42064925	True	NM_006803,NM_033011,NM_000930	chr8,chr8,chr8	+,-,-	AP3M2,PLAT,PLAT	-53667,320,320
chr1:1551986-1552238	chr1	+	1551990	1552212	True	NM_001170687,NM_080875,NM_001170689,NM_001170688,NM_001170686,NR_033183,NM_014188	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,+,-	MIB2,MIB2,MIB2,MIB2,MIB2,MIB2,SSU72	-1246,-1246,-796,-1246,-1246,-1246,-41728
chr16:31720518-31720747	chr16	+	31720518	31720704	True	NR_027011,NR_024034,NM_001130913	chr16,chr16,chr16	-,+,+	CSDAP1,KIAA0664L3,ZNF720	-139673,-8635,3845
chr12:122109708-122109992	chr12	+	122109817	122110015	True	NM_001080825,NM_173855	chr12,chr12	+,-	TMEM120B,MORN3	40642,-2257
chr2:26702782-26703110	chr2	+	26702937	26703155	True	NM_194322,NM_194323,NM_004802,NM_145038	chr2,chr2,chr2,chr2	-,-,-,+	OTOF,OTOF,OTOF,CCDC164	-2027,-2027,-2027,-78204
chr3:101280686-101280898	chr3	+	101280702	101280944	True	NM_020654,NM_017819	chr3,chr3	-,+	SENP7,RG9MTD1	-48617,-41
chr12:24736940-24737403	chr12	+	24736995	24737334	True	NR_030625,NR_029451	chr12,chr12	+,-	MIR920,C12orf67	-371691,9
chr9:36037617-36038028	chr9	+	36037632	36037970	True	NM_021111,NM_019897	chr9,chr9	+,-	RECK,OR2S2	-780,-79481
chr4:165866496-165866972	chr4	+	165866571	165867009	True	NM_153027,NM_001012414	chr4,chr4	+,-	C4orf39,TRIM61	11090,31859
chrX:150911757-150912117	chrX	+	150911761	150912087	True	NR_029973,NM_005140	chrX,chrX	-,+	MIR452,CNGA2	216147,-8594
chr2:220379056-220379436	chr2	+	220379164	220379362	True	NM_001195731,NM_018674,NM_182847	chr2,chr2,chr2	-,+,+	CHPF,ACCN4,ACCN4	28507,-323,-323
chr16:55601039-55601252	chr16	+	55601044	55601301	True	NM_032330,NM_001025194	chr16,chr16	+,-	CAPNS2,CES1	-511,265837
chr22:23524797-23525707	chr22	+	23524801	23525580	True	NM_004327,NM_021574,NM_014433	chr22,chr22,chr22	+,+,-	BCR,BCR,RTDR1	-2300,-2300,-40560
chr2:71046664-71046957	chr2	+	71046669	71046961	True	NM_173535,NM_012476	chr2,chr2	-,+	CLEC4F,VAX2	821,80758
chr3:13919679-13919969	chr3	+	13919782	13919996	True	NM_004625,NR_036481	chr3,chr3	-,+	WNT7A,LOC100132526	1672,54556
chr6:3904394-3905559	chr6	+	3904527	3905059	True	NM_183373,NM_012135	chr6,chr6	-,+	C6orf145,FAM50B	-152281,-54946
chr21:31969500-31969863	chr21	+	31969499	31969685	True	NM_181605,NM_181604,NM_181620,NM_001164434	chr21,chr21,chr21,chr21	+,-,+,-	KRTAP6-3,KRTAP6-2,KRTAP22-1,KRTAP22-2	-4798,1570,3754,-6783
chr9:21558697-21559290	chr9	+	21558726	21559249	True	NR_027054,NM_024013	chr9,chr9	-,+	LOC554202,IFNA1	498,-118345
chr5:83629975-83630981	chr5	+	83630347	83631037	True	NM_005711,NM_004385	chr5,chr5	-,+	EDIL3,VCAN	49631,-862914
chr15:65813917-65814327	chr15	+	65813989	65814143	True	NM_130434,NM_017743,NM_197961,NM_197960,NM_016395	chr15,chr15,chr15,chr15,chr15	-,-,-,-,+	DPP8,DPP8,DPP8,DPP8,PTPLAD1	-3954,-3954,-3954,-4380,8683
chr7:149568386-149569265	chr7	+	149568402	149569028	True	NM_001100592,NM_145230,NR_027040	chr7,chr7,chr7	+,+,-	ATP6V0E2,ATP6V0E2,LOC401431	1028,1028,1973
chr9:40714620-40715907	chr9	+	40714852	40714931	True	NR_026801,NM_033160	chr9,chr9	+,-	FAM74A3,ZNF658	592,77232
chr9:40714620-40715907	chr9	-	43616119	43616198	False	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	14587,68686
chr19:46978718-46980408	chr19	+	46979318	46980134	True	NM_018215,NM_001103149,NM_005184	chr19,chr19,chr19	-,-,+	PNMAL1,PNMAL1,CALM3	-4498,-4498,124377
chr7:151658563-151659178	chr7	+	151658665	151659081	True	NM_145292,NM_016203,NR_033169	chr7,chr7,chr7	+,-,+	GALNTL5,PRKAG2,GALNTL5	-5252,-84349,-5252
chr12:44137488-44138111	chr12	+	44137660	44138041	True	NM_001098615,NM_001114182	chr12,chr12	-,+	PUS7L,IRAK4	14573,14705
chr9:140485703-140485976	chr9	+	140485706	140485816	True	NM_152285,NM_138462	chr9,chr9	+,-	ARRDC1,ZMYND19	14279,-769
chr10:75546251-75546860	chr10	+	75546288	75546633	True	NM_015037,NM_003635,NM_203298	chr10,chr10,chr10	+,-,+	KIAA0913,NDST2,CHCHD1	-734,25013,-4531
chr6:15979532-15980030	chr6	+	15979807	15979949	True	NM_013262,NR_036448	chr6,chr6	+,-	MYLIP,DTNBP1	149367,-316518
chr8:12051397-12051604	chr8	+	12051493	12051621	True	NM_001083537,NR_003494,NR_027425	chr8,chr8,chr8	-,-,+	FAM86B1,FAM86B1,FAM66D	53,53,-78253
chr8:12051397-12051604	chr8	+	12293766	12293894	False	NR_026789,NM_001137610	chr8,chr8	+,-	FAM66A,FAM86B2	-74289,8
chr12:1058912-1059181	chr12	+	1058969	1059203	True	NM_134424,NM_178039	chr12,chr12	-,+	RAD52,ERC1	-106,41200
chr6:5970722-5972574	chr6	+	5970921	5971820	True	NM_016588,NM_004271	chr6,chr6	-,+	NRN1,LY86	35864,617113
chr7:65972862-65973151	chr7	+	65972861	65973043	True	NM_001167961,NR_002933	chr7,chr7	+,-	KCTD7,LOC493754	120824,70505
chr20:43991097-43991693	chr20	+	43991369	43991710	True	NM_033542,NR_003189,NM_001099791,NM_002999,NM_001197129	chr20,chr20,chr20,chr20,chr20	+,+,+,-,+	SYS1,SYS1-DBNDD2,SYS1,SDC4,SYS1	29,98,29,-14305,-843
chr19:11975754-11976696	chr19	+	11976013	11976526	True	NM_152262,NM_001080493	chr19,chr19	+,-	ZNF439,ZNF823	317,-126253
chr1:228338314-228339408	chr1	+	228338581	228339375	True	NM_181465,NM_020435,NM_001159391	chr1,chr1,chr1	-,+,+	MRPL55,GJC2,GUK1	-41568,-1079,-6228
chr22:50701465-50702107	chr22	+	50701535	50702151	True	NM_031454,NM_002969,NM_002751	chr22,chr22,chr22	+,-,-	SELO,MAPK12,MAPK11	-62178,-1446,6678
chr17:18269252-18269929	chr17	+	18269501	18269617	True	NM_004169,NM_148918,NM_001145127	chr17,chr17,chr17	-,-,+	SHMT1,SHMT1,EVPLL	-2645,-2645,11461
chr21:45773974-45774361	chr21	+	45773984	45774325	True	NM_003307,NM_004928	chr21,chr21	+,-	TRPM2,C21orf2	-551,-14699
chr5:78922875-78923399	chr5	+	78922986	78923311	True	NM_004272,NM_173797	chr5,chr5	-,+	HOMER1,PAPD4	-113286,-14803
chr2:20189953-20191056	chr2	+	20190192	20191068	True	NM_001006657,NR_033875,NM_020779	chr2,chr2,chr2	-,+,-	WDR35,FLJ12334,WDR35	-308,-121632,-308
chr19:38047894-38048449	chr19	+	38047959	38048335	True	NM_016536,NM_152606	chr19,chr19	-,+	ZNF571,ZNF540	37388,-5703
chr11:128461709-128462368	chr11	+	128461826	128462404	True	NM_001167681,NM_001143820	chr11,chr11	+,-	FLI1,ETS1	101406,-4373
chr17:5321181-5321865	chr17	+	5321500	5321912	True	NR_027685,NM_001160243,NM_001160244,NR_027681,NM_001160246,NR_027680,NM_001033002,NM_002532,NR_027682,NR_027684,NR_027683,NM_001160266,NM_001160267,NR_027678,NR_027679	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,+,+,-,+,+,+,+,+,+,+	RPAIN,RPAIN,RPAIN,RPAIN,RPAIN,RPAIN,RPAIN,NUP88,RPAIN,RPAIN,RPAIN,RPAIN,RPAIN,RPAIN,RPAIN	1048,1048,1048,1048,1048,1048,1048,1199,1048,1048,1048,1048,1048,1048,1048
chr19:48405988-48406797	chr19	+	48406039	48406218	True	NM_003167,NR_004437,NR_024216	chr19,chr19,chr19	-,+,+	SULT2A1,SNAR-A12,SNAR-A13	-16385,4716,4716
chr17:38072626-38073419	chr17	+	38072838	38073370	True	NM_001165959,NM_018530,NM_001165958,NM_001042471,NM_001195545	chr17,chr17,chr17,chr17,chr17	-,-,-,-,+	GSDMB,GSDMB,GSDMB,GSDMB,LOC100505591	1583,473,1583,1583,24356
chr10:14919981-14920243	chr10	+	14920049	14920284	True	NM_001029954,NR_034181,NM_024670,NM_001193426,NM_001193427,NM_001193424,NM_001193425	chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,+,+,+,+,+,+	CDNF,SUV39H2,SUV39H2,SUV39H2,SUV39H2,SUV39H2,SUV39H2	-40066,497,614,497,580,497,580
chr9:136444858-136445150	chr9	+	136444914	136445060	True	NM_014694,NM_001080515	chr9,chr9	+,-	ADAMTSL2,FAM163B	-44990,358
chr9:101580037-101580595	chr9	+	101580099	101580502	True	NM_173551,NM_024642	chr9,chr9	-,+	ANKS6,GALNT12	-21305,-10181
chr16:1032706-1032950	chr16	+	1032710	1032998	True	NR_033645,NM_014587,NR_036442	chr16,chr16,chr16	-,+,-	LMF1,SOX8,LMF1	-1392,-953,-1392
chr18:3451338-3451562	chr18	+	3451378	3451536	True	NM_019856,NM_173211,NM_173210,NM_003244,NM_170695,NM_173208,NM_173209,NM_173207	chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18	-,+,+,+,+,+,+,+	MYOM1,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1	-231272,2235,54,-1259,54,-1400,-1458,-3823
chr7:80089918-80091019	chr7	+	80090491	80091035	True	NM_001102386,NM_001001547	chr7,chr7	-,+	GNAT3,CD36	50262,140468
chr1:28655077-28655368	chr1	+	28655242	28655386	True	NM_014280,NM_017638,NM_001127350	chr1,chr1,chr1	-,+,+	DNAJC8,MED18,MED18	-95700,126,126
chr10:6341484-6342425	chr10	+	6341488	6342410	True	NM_004566,NM_000417	chr10,chr10	+,-	PFKFB3,IL2RA	-96705,-237155
chr12:2902777-2902995	chr12	+	2902777	2902843	True	NM_002014,NR_033958	chr12,chr12	+,-	FKBP4,LOC283440	1264,-21942
chr1:235665720-235667123	chr1	+	235665860	235666907	True	NM_003193,NM_152490	chr1,chr1	+,-	TBCE,B3GALNT2	-135184,931
chr15:89786250-89787118	chr15	+	89786264	89787072	True	NM_001113378,NM_000326,NM_018193	chr15,chr15,chr15	+,-,+	FANCI,RLBP1,FANCI	121,-21342,121
chrX:70750173-70750866	chrX	+	70750299	70750913	True	NM_181672,NM_181673,NR_002226	chrX,chrX,chrX	+,+,-	OGT,OGT,INGX	1998,1998,-37695
chr7:105162241-105162468	chr7	+	105162300	105162372	True	NM_021930,NM_019042	chr7,chr7	+,-	RINT1,PUS7	10159,363
chr8:41166355-41166679	chr8	+	41166403	41166591	True	NM_001174124,NM_003012	chr8,chr8	+,-	GOLGA7,SFRP1	181489,449
chr14:31486559-31487230	chr14	+	31486744	31487014	True	NM_001083893,NM_007077,NR_030354,NM_014574,NM_001128126	chr14,chr14,chr14,chr14,chr14	-,+,-,-,+	STRN3,AP4S1,MIR624,STRN3,AP4S1	8643,7668,-2796,8643,7668
chrX:55115533-55116519	chrX	+	55115534	55116496	True	NM_001037968,NM_207339	chrX,chrX	-,+	ALAS2,PAGE2	-58037,-88
chr22:25595928-25597304	chr22	+	25595935	25597333	True	NM_004076,NM_182492	chr22,chr22	+,-	CRYBB3,LRP5L	-161,161241
chr16:83839529-83840192	chr16	+	83839658	83840216	True	NM_001080442,NM_001537	chr16,chr16	-,+	SLC38A8,HSBP1	235596,1376
chr19:17136076-17137097	chr19	+	17136329	17137097	True	NM_001130065,NM_015692	chr19,chr19	+,-	MYO9B,CPAMD8	49493,578
chr3:127295886-127297811	chr3	+	127295994	127297564	True	NM_016372,NM_004526	chr3,chr3	-,+	TPRA1,MCM2	1766,19688
chr3:132378055-132378293	chr3	+	132378054	132378270	True	NM_032169,NM_198329,NM_024818	chr3,chr3,chr3	-,+,+	ACAD11,UBA5,UBA5	755,-4815,869
chr17:72746324-72746755	chr17	+	72746329	72746787	True	NM_004252,NM_015654,NR_037409	chr17,chr17,chr17	+,-,+	SLC9A3R1,NAT9,MIR3615	-1617,25733,-1628
chr19:58919168-58919547	chr19	+	58919295	58919581	True	NM_138466,NM_173548	chr19,chr19	-,+	ZNF837,ZNF584	-26906,481
chr14:77100002-77100303	chr14	+	77100071	77100305	True	NM_015305,NM_014909	chr14,chr14	-,+	ANGEL1,VASH1	179028,127929
chr12:99025473-99025925	chr12	+	99025587	99025978	True	NM_201612,NM_001160	chr12,chr12	-,+	IKBIP,APAF1	12666,13099
chr7:156804358-156804657	chr7	+	156804383	156804665	True	NM_005515,NM_138400,NM_001165255	chr7,chr7,chr7	-,+,-	MNX1,NOM1,MNX1	-1036,-62017,-2254
chr13:51721787-51722071	chr13	+	51721888	51722068	True	NR_003923,NM_145019	chr13,chr13	-,+	GUCY1B2,FAM124A	-81595,74438
chr6:136610291-136610659	chr6	+	136610324	136610708	True	NM_001077441,NM_001077440,NM_018945,NM_014739	chr6,chr6,chr6,chr6	-,-,+,-	BCLAF1,BCLAF1,PDE7B,BCLAF1	331,331,-437541,331
chr1:149911094-149911465	chr1	+	149911113	149911419	True	NM_181873,NM_016074,NM_001145862	chr1,chr1,chr1	-,+,-	MTMR11,BOLA1,MTMR11	-2847,-40010,-2322
chr15:101834362-101834730	chr15	+	101834451	101834729	True	NM_024652,NM_003090	chr15,chr15	+,-	LRRK1,SNRPA1	-375043,781
chr19:21265934-21267719	chr19	+	21266162	21267374	True	NM_182515,NM_021269	chr19,chr19	+,-	ZNF714,ZNF708	-1260,244889
chr11:64647127-64647766	chr11	+	64647199	64647595	True	NM_006795,NM_006244	chr11,chr11	-,+	EHD1,PPP2R5B	-1008,44547
chrX:48396198-48396401	chrX	+	48396294	48396380	True	NM_033518,NM_002536	chrX,chrX	-,+	SLC38A5,TBC1D25	-67650,1694
chrX:47245260-47246017	chrX	+	47245261	47245662	True	NR_003710,NM_007130	chrX,chrX	+,-	SNORA11C,ZNF41	2386,96740
chr12:82137163-82138292	chr12	+	82137386	82138032	True	NM_032230,NM_003625	chr12,chr12	+,-	C12orf26,PPFIA2	614243,15141
chr17:20538080-20538914	chr17	+	20538474	20538958	True	NM_001190790,NR_029393	chr17,chr17	+,-	CDRT15L2,KRT16P3	-55488,-130663
chr5:41925999-41926395	chr5	+	41926011	41926404	True	NM_033484,NM_012176,NM_000436	chr5,chr5,chr5	+,+,-	FBXO4,FBXO4,OXCT1	-706,-706,-55220
chr10:102131771-102133068	chr10	+	102132020	102133042	True	NM_016112,NR_026762	chr10,chr10	-,+	PKD2L1,NCRNA00263	-41777,290
chr11:89819575-89820062	chr11	+	89819603	89820063	True	NM_001143975,NR_028346	chr11,chr11	+,-	UBTFL1,TRIM53	-536,-83927
chr11:89819575-89820062	chr11	+	49104289	49104413	False	NM_001014986,NR_027044	chr11,chr11	-,+	FOLH1,LOC440040	125859,475666
chr11:89819575-89820062	chr11	-	89486188	89486648	False	NM_001146162,NM_020358	chr11,chr11	+,-	TRIM77,TRIM49	-42772,55145
chr19:49586827-49587675	chr19	+	49587514	49587650	True	NM_031886,NM_003089	chr19,chr19	-,+	KCNA7,SNRNP70	-11316,814
chr1:51976316-51976556	chr1	+	51976405	51976563	True	NM_001981,NM_024586	chr1,chr1	-,+	EPS15,OSBPL9	8482,105982
chr1:35738612-35739145	chr1	+	35738626	35739082	True	NM_005066,NM_005095	chr1,chr1	-,+	SFPQ,ZMYM4	-79883,-4114
chr18:77623714-77624102	chr18	+	77623823	77623945	True	NM_012283,NM_001146343	chr18,chr18	+,-	KCNG2,PQLC1	-206,87758
chr10:30995935-30996297	chr10	+	30995980	30996087	True	NM_183058,NM_005204	chr10,chr10	-,+	LYZL2,MAP3K8	-77333,-273173
chr1:186423395-186424309	chr1	+	186423634	186424320	True	NM_002597,NM_022375,NM_022576	chr1,chr1,chr1	-,+,-	PDC,OCLM,PDC	5969,-53988,-5778
chr4:174554611-174554898	chr4	+	174554610	174554934	True	NR_003679,NM_006792	chr4,chr4	+,-	NBLA00301,MORF4	-103054,-16816
chrX:153603209-153603428	chrX	+	153603265	153603407	True	NM_001110556,NM_000117,NM_001456	chrX,chrX,chrX	-,+,-	FLNA,EMD,FLNA	-259,4189,-259
chr1:110224971-110226368	chr1	+	110225213	110226256	True	NM_000561,NM_000849,NM_146421	chr1,chr1,chr1	+,-,+	GSTM1,GSTM3,GSTM1	4161,57465,4161
chr1:110224971-110226368	chr1	+	110244156	110244701	False	NM_000851,NM_000849	chr1,chr1	+,-	GSTM5,GSTM3	10162,39020
chr15:68724140-68724428	chr15	+	68724139	68724199	True	NM_006091,NM_001004439	chr15,chr15	+,-	CORO2B,ITGA11	147373,343
chr9:33500513-33501170	chr9	+	33501022	33501174	True	NR_003667,NR_003573	chr9,chr9	-,+	SUGT1P1,ANXA2P2	10040,123048
chr6:35696884-35698306	chr6	+	35697171	35698077	True	NR_027117,NM_001145775,NM_145028	chr6,chr6,chr6	-,-,+	LOC285847,FKBP5,C6orf81	6697,-811,6781
chr14:54867802-54868647	chr14	+	54868235	54868336	True	NM_005192,NM_005776,NM_001130851	chr14,chr14,chr14	+,-,+	CDKN3,CNIH,CDKN3	-4621,39871,-4621
chr17:6659693-6660479	chr17	+	6659698	6660300	True	NM_199139,NM_177550,NM_017523	chr17,chr17,chr17	+,-,+	XAF1,SLC13A5,XAF1	-593,-42958,-593
chr14:97260928-97261368	chr14	+	97261134	97261382	True	NM_003384,NM_018036	chr14,chr14	+,-	VRK1,ATG2B	2301,-431456
chr7:35725233-35725956	chr7	+	35725258	35725748	True	NM_022373,NM_001011553	chr7,chr7	-,+	HERPUD2,SEPT7	9084,114878
chr14:23354009-23354211	chr14	+	23354026	23354228	True	NM_001077351,NM_173527	chr14,chr14	-,+	RBM23,REM2	34218,-1645
chr4:176926257-176927051	chr4	+	176926268	176927089	True	NM_170710,NM_005277,NM_201592	chr4,chr4,chr4	+,-,-	WDR17,GPM6A,GPM6A	59895,-2620,-2620
chr17:21541805-21543004	chr17	+	21542408	21542797	True	NM_001113434,NM_001194958	chr17,chr17	-,+	C17orf51,KCNJ18	-87467,-234011
chrX:72300111-72301880	chrX	+	72300252	72301740	True	NM_001042506,NM_001012977	chrX,chrX	+,-	PABPC1L2B,PABPC1L2A	-76951,-901
chrX:72300111-72301880	chrX	-	72220960	72222448	False	NR_026595,NM_001042506	chrX,chrX	-,+	NCRNA00246,PABPC1L2B	-57371,903
chr22:50791826-50792453	chr22	+	50791826	50792154	True	NM_001001794,NM_014678	chr22,chr22	-,+	FAM116B,PPP6R2	-26337,-10117
chr2:160455282-160456301	chr2	+	160455625	160455846	True	NM_013450,NM_022826	chr2,chr2	-,+	BAZ2B,MARCH7	17264,113163
chr1:151168666-151169152	chr1	+	151168668	151169022	True	NM_001135637,NM_001135636,NM_003557,NM_005997,NM_001135638	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	PIP5K1A,PIP5K1A,PIP5K1A,VPS72,PIP5K1A	1998,1998,1998,-6028,1998
chr6:151561457-151561662	chr6	+	151561506	151561700	True	NM_005100,NM_020861	chr6,chr6	+,-	AKAP12,ZBTB2	-423,151027
chr19:10428420-10428703	chr19	+	10428533	10428739	True	NM_001031734,NM_001103167,NM_003259	chr19,chr19,chr19	-,-,+	FDX1L,ZGLP1,ICAM5	-1842,-8300,-27929
chr22:20616972-20617518	chr22	+	20617302	20617352	True	NM_015672,NM_003426	chr22,chr22	-,+	RIMBP3,ZNF74	-155516,131127
chr22:20616972-20617518	chr22	-	18760183	18760233	False	NM_017414,NR_003267	chr22,chr22	+,-	USP18,GGT3P	-127476,19291
chr22:20616972-20617518	chr22	-	20365216	20365266	False	NR_003563,NR_026919	chr22,chr22	-,+	PI4KAP1,LOC150197	33479,-171412
chr22:20616972-20617518	chr22	-	21561207	21561257	False	NR_024583,NR_002829	chr22,chr22	+,-	POM121L8P,P2RX6P	75456,-162669
chr8:133727578-133728307	chr8	+	133727681	133728305	True	NM_012472,NM_198513	chr8,chr8	-,+	LRRC6,PHF20L1	-39868,59298
chr5:39359613-39360473	chr5	+	39359612	39360514	True	NM_001737,NM_003999	chr5,chr5	-,+	C9,OSMR	4191,-513562
chr7:74072143-74072358	chr7	+	74072288	74072348	True	NM_173537,NM_001518,NM_033001,NM_033000,NM_001163636,NM_032999	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,+,+	GTF2IRD2,GTF2I,GTF2I,GTF2I,GTF2I,GTF2I	195543,-309,-309,-309,-309,-309
chr12:49935084-49935328	chr12	+	49935118	49935226	True	NM_012284,NM_001012300	chr12,chr12	+,-	KCNH3,MCRS1	-2229,25046
chr2:191423034-191424581	chr2	+	191423312	191424400	True	NM_001142645,NM_005966	chr2,chr2	-,+	TMEM194B,NAB1	-23844,89447
chr15:43217183-43217956	chr15	+	43217196	43217496	True	NM_024956,NM_173500	chr15,chr15	+,-	TMEM62,TTBK2	208225,-4189
chrX:44401566-44401807	chrX	+	44401634	44401826	True	NM_022076,NM_173794	chrX,chrX	+,-	DUSP21,FUNDC1	301422,445
chr15:42691826-42693246	chr15	+	42691901	42693056	True	NM_022473,NM_173090,NM_173088,NM_173089	chr15,chr15,chr15,chr15	-,+,+,+	ZFP106,CAPN3,CAPN3,CAPN3	56724,3920,1531,3920
chr11:61225608-61226742	chr11	+	61226393	61226506	True	NM_001136040,NM_001170753	chr11,chr11	-,+	CPSF7,C11orf66	-28929,22078
chr3:137907523-137909218	chr3	+	137907591	137908952	True	NM_014154,NM_015396,NM_213654,NM_016216	chr3,chr3,chr3,chr3	+,+,+,-	ARMC8,ARMC8,ARMC8,DBR1	-1494,-1494,-1494,-13800
chr1:150946131-150946495	chr1	+	150946277	150946503	True	NM_003568,NM_022075,NM_181746	chr1,chr1,chr1	+,-,-	ANXA9,LASS2,LASS2	7995,987,987
chr1:23695985-23696411	chr1	+	23695998	23696442	True	NR_033691,NR_033690,NM_001077195,NM_030634	chr1,chr1,chr1,chr1	+,+,-,-	C1orf213,C1orf213,ZNF436,ZNF436	-338,-585,-35,-1119
chr1:145526022-145527143	chr1	+	145526118	145527012	True	NR_002328,NM_001184795,NM_003637	chr1,chr1,chr1	-,+,+	GNRHR2,PEX11B,ITGA10	-10042,-9609,-1179
chr17:80054827-80055178	chr17	+	80055026	80055214	True	NM_004104,NM_212492	chr17,chr17	-,+	FASN,GPS1	942,-45314
chr1:1449863-1450462	chr1	+	1449897	1450265	True	NM_001170536,NM_001170535,NM_018188,NM_001114748	chr1,chr1,chr1,chr1	+,+,+,-	ATAD3A,ATAD3A,ATAD3A,C1orf70	-2038,-2425,-2425,25531
chr1:1449863-1450462	chr1	+	1411729	1411779	False	NR_026871,NM_031921	chr1,chr1	-,+	LOC441869,ATAD3B	-55079,-4616
chr16:56485893-56486660	chr16	+	56485974	56486682	True	NM_018233,NM_007006	chr16,chr16	+,-	OGFOD1,NUDT21	-601,-713
chrX:138905402-138906183	chrX	+	138905451	138905804	True	NM_173694,NM_000133,NM_001010986	chrX,chrX,chrX	-,+,-	ATP11C,F9,ATP11C	8703,-292614,8703
chr19:19736985-19738414	chr19	+	19737090	19738337	True	NM_004720,NM_025245,NM_033204	chr19,chr19,chr19	-,-,+	LPAR2,PBX4,ZNF101	753,-7651,41325
chr10:96164228-96164659	chr10	+	96164428	96164553	True	NM_022451,NM_015188	chr10,chr10	-,+	NOC3L,TBC1D12	-41745,-2301
chr9:32380809-32382380	chr9	+	32380977	32382341	True	NM_014314,NM_002197	chr9,chr9	-,+	DDX58,ACO1	144033,2259
chr20:57090792-57091248	chr20	+	57090838	57091277	True	NM_153360,NR_034147	chr20,chr20	-,+	APCDD1L,LOC149773	-889,-454
chr12:21470044-21471211	chr12	+	21470235	21470868	True	NM_021094,NM_000415	chr12,chr12	-,+	SLCO1A2,IAPP	17027,54933
chr15:55616176-55617245	chr15	+	55616351	55617225	True	NM_004855,NM_183235	chr15,chr15	+,-	PIGB,RAB27A	-5269,-34350
chr3:101406415-101407108	chr3	+	101406469	101406814	True	NR_024407,NM_000986	chr3,chr3	+,-	LOC100009676,RPL24	-11247,-906
chr4:37828674-37828885	chr4	+	37828675	37828931	True	NM_001085400,NM_018290	chr4,chr4	-,+	RELL1,PGM2	-140676,-444
chr12:57473328-57474081	chr12	+	57473331	57474085	True	NM_001130963,NM_005967,NM_015257	chr12,chr12,chr12	-,+,-	TMEM194A,NAB2,TMEM194A	-757,8591,-757
chr2:139658994-139659314	chr2	+	139659066	139659352	True	NM_007226,NR_033658	chr2,chr2	-,+	NXPH2,LOC647012	-121255,-4223
chr1:47282233-47282836	chr1	+	47282281	47282783	True	NM_001099772,NR_002788	chr1,chr1	+,-	CYP4B1,CYP4Z2P	-17669,83414
chr19:55850709-55850918	chr19	+	55850757	55850961	True	NM_001085488,NM_032701	chr19,chr19	-,+	TMEM150B,SUV420H2	-14049,259
chr12:121735960-121736376	chr12	+	121736302	121736376	True	NM_002560,NM_153500,NM_153499,NM_172214,NM_172215,NM_172216,NM_006549,NM_172226	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,-,-,-,-,-,-,-	P2RX4,CAMKK2,CAMKK2,CAMKK2,CAMKK2,CAMKK2,CAMKK2,CAMKK2	-88689,-191,-191,-191,-191,-191,-191,-1746
chr12:65516439-65518377	chr12	+	65516618	65518090	True	NM_001167614,NM_007191	chr12,chr12	+,-	LEMD3,WIF1	45260,-1272
chr19:23582907-23583785	chr19	+	23583083	23583819	True	NR_003662,NM_003430	chr19,chr19	+,-	RPSAP58,ZNF91	361996,-4814
chr17:40913805-40915294	chr17	+	40914137	40915172	True	NR_024462,NR_024461,NM_005854	chr17,chr17,chr17	-,-,+	LOC100190938,LOC100190938,RAMP2	-862,-862,-976
chr6:25665220-25665926	chr6	+	25665232	25665808	True	NM_170745,NM_006998	chr6,chr6	-,+	HIST1H2AA,SCGN	61032,-12854
chr2:174296483-174298382	chr2	+	174296751	174298267	True	NM_145810,NR_033882	chr2,chr2	+,-	CDCA7,LOC339751	-77244,-149987
chr8:20066310-20066979	chr8	+	20066552	20067018	True	NM_001693,NM_003053	chr8,chr8	+,-	ATP6V1B2,SLC18A1	-11899,-25835
chr8:39695197-39695726	chr8	+	39695224	39695774	True	NM_001464,NM_002164	chr8,chr8	-,+	ADAM2,IDO1	55,75553
chr21:30957989-30958325	chr21	+	30957992	30958344	True	NM_175611,NR_033368	chr21,chr21	-,+	GRIK1,NCRNA00258	353988,10015
chr7:95139000-95140150	chr7	+	95139155	95140186	True	NM_016116,NM_001018161	chr7,chr7	+,-	ASB4,PON2	-23993,-74771
chr6:57065972-57067395	chr6	+	57066302	57067272	True	NM_183227,NM_004282	chr6,chr6	-,+	RAB23,BAG2	19036,-29261
chr5:141495143-141496092	chr5	+	141495238	141495762	True	NM_005471,NM_030571	chr5,chr5	-,+	GNPDA1,NDFIP1	-102618,-6975
chr17:80058314-80058538	chr17	+	80058320	80058552	True	NM_004104,NM_212492	chr17,chr17	-,+	FASN,GPS1	-2214,-48608
chr10:135384195-135384416	chr10	+	135384275	135384461	True	NM_001143764,NR_033789,NM_001143763,NM_130784,NM_000773	chr10,chr10,chr10,chr10,chr10	-,-,-,-,+	SYCE1,SPRNP1,SYCE1,SYCE1,CYP2E1	-5137,-813,-5137,-1399,-43459
chr10:135384195-135384416	chr10	+	135239480	135239666	False	NR_002934,NM_001012508	chr10,chr10	+,-	LOC619207,SPRN	27765,-1359
chr15:40854838-40855453	chr15	+	40854840	40855290	True	NM_052849,NM_001080792,NM_001080791,NM_152260	chr15,chr15,chr15,chr15	-,-,-,+	C15orf57,C15orf57,C15orf57,RPUSD2	2020,2020,2020,6246
chr7:5554206-5555488	chr7	+	5554631	5555352	True	NM_024963,NM_003088	chr7,chr7	-,+	FBXL18,FSCN1	-1232,77101
chr11:129817061-129817416	chr11	+	129817069	129817447	True	NR_024233,NM_199439,NM_199438	chr11,chr11,chr11	+,-,-	NCRNA00167,PRDM10,PRDM10	55071,120,120
chr12:71113147-71114382	chr12	+	71113162	71114241	True	NM_130846,NM_014505	chr12,chr12	-,+	PTPRR,KCNMB4	34182,-353160
chr12:104233070-104233983	chr12	+	104233427	104234000	True	NM_003299,NM_001031701	chr12,chr12	+,-	HSP90B1,NT5DC3	90188,1032
chr21:39287130-39288013	chr21	+	39287159	39288050	True	NM_002240,NR_026838	chr21,chr21	-,+	KCNJ6,DSCR8	696,205494
chr5:178452484-178452743	chr5	+	178452550	178452636	True	NM_001136116,NM_000843	chr5,chr5	+,-	ZNF879,GRM6	-1825,-30426
chr5:156770045-156771470	chr5	+	156770424	156771506	True	NM_001001343,NM_014376	chr5,chr5	-,+	FNDC9,CYFIP2	1273,-74113
chr10:46159807-46160301	chr10	+	46160002	46160098	True	NM_174890,NM_001169106,NM_001128324	chr10,chr10,chr10	-,+,-	ANUBL1,FAM21C,ANUBL1	8205,62549,8205
chr14:69260992-69261326	chr14	+	69261061	69261373	True	NM_004926,NM_207442,NM_001193360	chr14,chr14,chr14	-,-,+	ZFP36L1,C14orf181,EXD2	-1276,1867,396820
chr9:4116281-4116539	chr9	+	4116280	4116588	True	NR_026663,NM_152629	chr9,chr9	+,-	C9orf70,GLIS3	-217693,35653
chr19:4557640-4557895	chr19	+	4557703	4557944	True	NM_152362,NM_032108	chr19,chr19	+,-	TNFAIP8L1,SEMA6B	81582,1877
chr4:169401057-169401396	chr4	+	169401171	169401339	True	NM_001012967,NM_001166108	chr4,chr4	-,+	DDX60L,PALLD	349,16877
chr8:71314403-71314619	chr8	+	71314501	71314575	True	NM_006540,NM_001011720	chr8,chr8	-,+	NCOA2,XKR9	1495,267024
chr22:38452458-38453073	chr22	+	38452581	38452999	True	NM_013356,NM_001039584,NM_012407,NM_001039583	chr22,chr22,chr22,chr22	-,+,+,+	SLC16A8,PICK1,PICK1,PICK1	26221,262,262,262
chr7:142761495-142761836	chr7	+	142761501	142761785	True	NR_002140,NM_001001667	chr7,chr7	-,+	OR6W1P,OR6V1	-619,-12115
chr7:37486297-37486721	chr7	+	37486327	37486768	True	NM_181791,NM_014800	chr7,chr7	+,-	GPR141,ELMO1	293227,1804
chr1:159172110-159172618	chr1	+	159172115	159172601	True	NM_002036,NR_037870,NM_001122951	chr1,chr1,chr1	+,-,+	DARC,LOC100131825,DARC	1201,-23,2447
chr1:230201402-230202581	chr1	+	230201652	230202444	True	NM_004481,NM_024554	chr1,chr1	+,-	GALNT2,PGBD5	511,310997
chr12:29493224-29495103	chr12	+	29493224	29494693	True	NM_018099,NM_016570	chr12,chr12	+,-	FAR2,ERGIC2	-116683,39512
chr19:2706214-2708146	chr19	+	2706704	2707242	True	NM_003249,NM_052847	chr19,chr19	+,-	THOP1,GNG7	78263,-3958
chr20:60943820-60944138	chr20	+	60943826	60944136	True	NM_001024,NM_005560	chr20,chr20	+,-	RPS21,LAMA5	17984,-1458
chr6:56788248-56788894	chr6	+	56788336	56788499	True	NM_152731,NM_001723	chr6,chr6	+,-	BEND6,DST	31273,-280642
chr5:140562667-140563257	chr5	+	140562714	140563254	True	NM_019120,NM_020957,NM_018930,NM_019119,NM_031947	chr5,chr5,chr5,chr5,chr5	+,+,+,+,-	PCDHB8,PCDHB16,PCDHB10,PCDHB9,SLC25A2	-5335,-1785,8697,3638,120408
chr16:220188-220702	chr16	+	220319	220473	True	NM_001077350,NM_000558,NM_000517,NM_001003938,NM_005331	chr16,chr16,chr16,chr16,chr16	-,+,+,+,+	NPRL3,HBA1,HBA2,HBM,HBQ1	-31647,6205,2372,-4397,9859
chr9:136224457-136224661	chr9	+	136224461	136224643	True	NM_133640,NM_000972,NM_181491,NR_000017,NR_002447,NM_003172,NM_017503,NR_002448,NR_000016	chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,+,-,+,+,-,+,+,+	MED22,RPL7A,MED22,SNORD36B,SNORD24,SURF1,SURF2,SNORD36A,SNORD36C	-9489,-9443,-9489,-7563,-8261,-1100,-1091,-7201,-6811
chr12:50672127-50673081	chr12	+	50672218	50672651	True	NM_016357,NM_001170804,NM_001113546	chr12,chr12,chr12	-,+,-	LIMA1,LARP4,LIMA1	4763,121940,4763
chr9:99617385-99618151	chr9	+	99617384	99618194	True	NR_028350,NM_001001662	chr9,chr9	+,-	LOC441454,ZNF782	53162,-995
chr5:148964478-148964851	chr5	+	148964696	148964898	True	NM_001892,NM_001001669	chr5,chr5	-,+	CSNK1A1,ARHGEF37	-33689,-3619
chr9:125646293-125647054	chr9	+	125646579	125646826	True	NR_003071,NM_012197	chr9,chr9	-,+	SNORD90,RABGAP1	-3981,56461
chr18:3383392-3384187	chr18	+	3383397	3383746	True	NM_019856,NM_174886	chr18,chr18	-,+	MYOM1,TGIF1	-163291,28325
chr10:94048922-94050505	chr10	+	94049926	94050274	True	NM_017824,NM_014912	chr10,chr10	+,-	MARCH5,CPEB3	645,651
chr2:217285117-217286111	chr2	+	217285180	217286009	True	NM_014140,NM_020814,NM_001127207	chr2,chr2,chr2	+,-,+	SMARCAL1,MARCH4,SMARCAL1	-8097,-48430,-7761
chr3:56700669-56701399	chr3	+	56700699	56701217	True	NR_024460,NM_015224	chr3,chr3	+,-	CCDC66,C3orf63	-109566,-2625
chr12:54653063-54653291	chr12	+	54653155	54653248	True	NM_002136,NM_001127322,NM_001127321	chr12,chr12,chr12	+,-,-	HNRNPA1,CBX5,CBX5	21239,132,173
chr16:89722415-89722635	chr16	+	89722434	89722556	True	NM_002768,NM_001083314,NM_153025	chr16,chr16,chr16	-,-,+	CHMP1A,CHMP1A,C16orf55	1631,1631,1653
chr12:60121439-60123151	chr12	+	60121514	60123086	True	NM_004731,NM_153377	chr12,chr12	+,-	SLC16A7,LRIG3	-38448,-807252
chr10:118308913-118309612	chr10	+	118309052	118309492	True	NM_000936,NM_144661	chr10,chr10	+,-	PNLIP,C10orf82	-3675,120039
chr11:111846085-111847089	chr11	+	111846179	111846915	True	NM_001885,NM_033425	chr11,chr11	-,+	CRYAB,DIXDC1	-63706,1117
chr3:125777578-125778553	chr3	+	125777595	125778553	True	NM_001008487,NM_001012337	chr3,chr3	-,+	SLC41A3,ROPN1B	-1977,-89618
chr3:36988100-36989520	chr3	+	36988285	36989396	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	-1737,45444
chr4:184025080-184026220	chr4	+	184025323	184026014	True	NR_024008,NM_024949	chr4,chr4	-,+	C4orf38,WWC2	-4971,-4914
chr14:75349036-75349717	chr14	+	75349074	75349630	True	NR_033814,NM_001080408,NM_001933	chr14,chr14,chr14	+,-,+	DLST,PROX2,DLST	-532,-18537,-532
chr1:43613496-43613800	chr1	+	43613631	43613745	True	NM_001101376,NM_006824	chr1,chr1	+,-	FAM183A,EBNA1BP2	-88,24291
chr19:49536240-49536442	chr19	+	49536415	49536491	True	NR_024244,NM_033378,NM_033377,NR_004383,NM_000737	chr19,chr19,chr19,chr19,chr19	-,+,-,+,-	SNAR-G2,CGB2,CGB1,SNAR-G1,CGB	-1371,-1336,3750,3785,-8822
chr19:49536240-49536442	chr19	-	49557534	49557584	False	NM_033183,NM_006179,NM_033043,NM_033142	chr19,chr19,chr19,chr19	-,-,+,-	CGB8,NTF4,CGB5,CGB7	-5166,9590,-10483,1463
chr4:2968570-2969283	chr4	+	2968806	2969135	True	NM_003703,NM_182982,NM_001004056,NM_001004057	chr4,chr4,chr4,chr4	-,+,+,+	NOP14,GRK4,GRK4,GRK4	-3688,-3515,-3515,-3515
chr6:143895387-143895778	chr6	+	143895430	143895654	True	NM_001100166,NR_027113	chr6,chr6	+,-	PHACTR2,LOC285740	33662,-4954
chr14:20815863-20817350	chr14	+	20815882	20816908	True	NM_001042618,NM_005484,NR_002312	chr14,chr14,chr14	+,+,-	PARP2,PARP2,RPPH1	-4166,-4166,-4312
chr19:58258558-58260459	chr19	+	58258953	58260094	True	NM_173632,NM_024833	chr19,chr19	+,-	ZNF776,ZNF671	-840,-19958
chrX:70179653-70180882	chrX	+	70179774	70180770	True	NM_032803,NM_001170931	chrX,chrX	-,+	SLC7A3,FOXO4	-28799,135228
chr19:40919228-40919588	chr19	+	40919228	40919552	True	NM_181882,NM_020971,NM_020956	chr19,chr19,chr19	-,+,-	PRX,SPTBN4,PRX	43,53573,43
chr11:102571333-102571589	chr11	+	102571349	102571631	True	NM_001166,NM_022122	chr11,chr11	+,-	BIRC2,MMP27	-353434,4887
chr14:24869877-24870287	chr14	+	24869881	24869971	True	NM_001039771,NM_025081	chr14,chr14	-,+	CBLN3,NYNRIN	28811,-1940
chr6:131593158-131594233	chr6	+	131593174	131594278	True	NM_001431,NM_138633	chr6,chr6	-,+	EPB41L2,AKAP7	-208712,-21721
chr1:25919153-25919358	chr1	+	25919184	25919308	True	NM_020379,NM_138618	chr1,chr1	+,-	MAN1C1,RHCE	24650,-171821
chr20:43754784-43755815	chr20	+	43754917	43755792	True	NM_080869,NM_002638	chr20,chr20	-,+	WFDC12,PI3	-1811,47747
chr7:123356595-123357559	chr7	+	123356817	123357590	True	NM_207163,NM_003941	chr7,chr7	+,-	LMOD2,WASL	-61007,31576
chr1:6086162-6086481	chr1	+	6086216	6086512	True	NM_001199860,NM_172130,NM_015102,NM_003636	chr1,chr1,chr1,chr1	+,+,-,+	KCNAB2,KCNAB2,NPHP4,KCNAB2	7835,-194,-33683,-194
chr2:107000257-107001593	chr2	+	107000646	107001579	True	NR_003506,NM_001144013	chr2,chr2	+,-	PLGLA,RGPD3	1189,83272
chr13:22202698-22202920	chr13	+	22202824	22202904	True	NM_152726,NM_002010	chr13,chr13	-,+	EFHA1,FGF9	-24469,42310
chr6:43027831-43029049	chr6	+	43027861	43029057	True	NM_015950,NM_001168370,NM_014780,NM_201521,NM_201523,NM_201522,NM_138343	chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,+,+,+,+	MRPL2,CUL7,CUL7,KLC4,KLC4,KLC4,KLC4	-619,-6178,-6178,-540,-283,270,-540
chr15:34681829-34682724	chr15	+	34681846	34682634	True	NM_175741,NR_036050,NM_181077,NR_036261	chr15,chr15,chr15,chr15	+,-,-,-	C15orf55,MIR1233-1,GOLGA8A,MIR1233-2	-43832,-7495,17,-7495
chr15:34681829-34682724	chr15	+	34828067	34828855	False	NR_036050,NM_175741,NM_001023567,NR_036261	chr15,chr15,chr15,chr15	-,+,-,-	MIR1233-1,C15orf55,GOLGA8B,MIR1233-2	-7495,-190053,17,-7495
chr20:2517058-2517847	chr20	+	2517198	2517832	True	NM_024325,NM_080751	chr20,chr20	-,+	ZNF343,TMC2	-27420,4
chr3:48540313-48540637	chr3	+	48540470	48540674	True	NM_033629,NM_016479	chr3,chr3	+,-	TREX1,SHISA5	-33292,1037
chr1:45242902-45244264	chr1	+	45243080	45244262	True	NR_001456,NR_001457,NM_153274,NR_000024,NR_000015,NM_001012	chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,+,+,+	SNORD38A,SNORD38B,BEST4,SNORD46,SNORD55,RPS8	191,33,9214,-967,-1594,-1885
chr8:124665044-124665874	chr8	+	124665131	124665852	True	NM_001081675,NM_144963	chr8,chr8	-,+	KLHL38,FAM91A1	59,115029
chr14:85995348-85996155	chr14	+	85995361	85996173	True	NM_013231,NM_000153	chr14,chr14	+,-	FLRT2,GALC	314,2463496
chr3:197303163-197304033	chr3	+	197303335	197304079	True	NM_203315,NM_001011537	chr3,chr3	-,+	BDH1,FYTTD1	-3141,172344
chr17:18323738-18324893	chr17	+	18323860	18324892	True	NM_148918,NR_001443	chr17,chr17	-,+	SHMT1,LOC339240	-57004,602
chr17:18323738-18324893	chr17	-	16754469	16754534	False	NR_026810,NR_029392	chr17,chr17	+,-	FAM106C,KRT16P2	-62470,-18322
chr17:18323738-18324893	chr17	-	20426143	20426208	False	NM_001190790,NR_029393	chr17,chr17	+,-	CDRT15L2,KRT16P3	56828,-18332
chr9:135037894-135038174	chr9	+	135038007	135038197	True	NM_032536,NM_004269	chr9,chr9	+,-	NTNG2,MED27	-724,-82754
chr5:112073247-112073605	chr5	+	112073287	112073595	True	NM_001127510,NM_000038,NM_005669	chr5,chr5,chr5	+,+,-	APC,APC,REEP5	-14,-14,184486
chr16:28936984-28937186	chr16	+	28937136	28937228	True	NM_024816,NM_001770,NM_001178098	chr16,chr16,chr16	-,+,+	RABEP2,CD19,CD19	-604,6031,6031
chr5:1798215-1798885	chr5	+	1798273	1798851	True	NM_004553,NM_032479	chr5,chr5	+,-	NDUFS6,MRPL36	2644,1155
chr5:1798215-1798885	chr2	-	70329880	70330148	False	NM_006196,NR_033872	chr2,chr2	+,-	PCBP1,LOC400960	-15346,-15733
chr10:1103328-1103567	chr10	+	1103417	1103593	True	NM_004508,NM_014023	chr10,chr10	-,+	IDI1,WDR37	-8356,-692
chr7:6675915-6676513	chr7	+	6676146	6676462	True	NM_017560,NM_006956	chr7,chr7	+,-	ZNF853,ZNF12	-20670,70154
chr11:64684022-64684285	chr11	+	64684151	64684289	True	NM_015104,NM_006244	chr11,chr11	-,+	ATG2A,PPP2R5B	483,7853
chr1:249131814-249132123	chr1	+	249131819	249132096	True	NM_024836,NM_030645	chr1,chr1	+,-	ZNF672,SH3BP5L	433,-11665
chr17:41325136-41325785	chr17	+	41325666	41325814	True	NM_007300,NM_031858,NM_005899,NM_031862	chr17,chr17,chr17,chr17	-,+,+,+	BRCA1,NBR1,NBR1,NBR1	-48166,-3215,-2480,-3228
chr14:106435213-106436526	chr14	+	106435250	106436482	True	NR_026800	chr14	+	KIAA0125	-51463
chr14:21758222-21758690	chr14	+	21758435	21758517	True	NM_020366,NM_031314	chr14,chr14	+,-	RPGRIP1,HNRNPC	-2362,-20797
chr2:67623897-67624371	chr2	+	67623921	67624314	True	NM_019002,NM_001190263	chr2,chr2	+,-	ETAA1,C1D	127,665895
chr8:99954711-99956291	chr8	+	99954778	99956154	True	NM_053001,NM_006281,NM_001142462	chr8,chr8,chr8	+,-,+	OSR2,STK3,OSR2	476,-116869,476
chr15:30487737-30488199	chr15	+	30487772	30488138	True	NR_026771,NM_139320	chr15,chr15	+,-	DKFZP434L187,CHRFAM7A	100,197776
chr15:30487737-30488199	chr15	-	32634978	32635318	False	NR_026859,NM_199357	chr15,chr15	-,+	FAM7A3,ARHGAP11A	91797,272372
chr8:146011738-146012303	chr8	+	146012162	146012336	True	NM_000973,NM_033301,NM_030580,NM_213605	chr8,chr8,chr8,chr8	-,-,-,+	RPL8,RPL8,ZNF34,ZNF517	5519,5443,439,11924
chr22:41695429-41695822	chr22	+	41695557	41695669	True	NM_017590,NM_002883	chr22,chr22	+,-	ZC3H7B,RANGAP1	1897,-13341
chr14:73923456-73924336	chr14	+	73923607	73924222	True	NM_003744,NM_001005745,NM_001005744,NM_001005743,NM_024644	chr14,chr14,chr14,chr14,chr14	-,-,-,-,+	NUMB,NUMB,NUMB,NUMB,C14orf169	1114,1114,1114,1114,33421
chr17:31323429-31323957	chr17	+	31323571	31323953	True	NM_173847,NM_015194	chr17,chr17	+,-	SPACA3,MYO1D	-4741,-119669
chr22:18039841-18040528	chr22	+	18040004	18040192	True	NM_031481,NM_001039366	chr22,chr22	+,-	SLC25A18,ATP6V1E1	2990,71446
chr10:116286628-116287888	chr10	+	116286688	116287388	True	NM_198496,NM_006720	chr10,chr10	+,-	VWA2,ABLIM1	-287721,-3
chr5:148205434-148205644	chr5	+	148205455	148205683	True	NM_000024,NM_000870	chr5,chr5	+,-	ADRB2,HTR4	472,-171716
chr8:33425274-33426580	chr8	+	33425595	33426409	True	NM_024787,NM_032509	chr8,chr8	-,+	RNF122,MAK16	-952,-82969
chr4:169241415-169242198	chr4	+	169241550	169242242	True	NM_017631,NM_001166108	chr4,chr4	-,+	DDX60,PALLD	-1592,175974
chr1:54619893-54620624	chr1	+	54619903	54620620	True	NM_201546,NM_016491	chr1,chr1	-,+	CDCP2,MRPL37	-460,45219
chr5:179250320-179250760	chr5	+	179250478	179250754	True	NM_014275,NM_003900	chr5,chr5	-,+	MGAT4B,SQSTM1	-16526,-2687
chr15:77175298-77177030	chr15	+	77175334	77176791	True	NM_002902,NM_020843	chr15,chr15	+,-	RCN2,SCAPER	47170,305
chr19:12449350-12450252	chr19	+	12449754	12450064	True	NM_003437,NM_145276	chr19,chr19	+,-	ZNF136,ZNF563	-175933,-5220
chr19:42386211-42386446	chr19	+	42386284	42386396	True	NM_198977,NM_001783,NM_021601,NM_004706,NM_199002,NM_173506	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,-	ARHGEF1,CD79A,CD79A,ARHGEF1,ARHGEF1,LYPD4	870,-5147,-5147,870,2049,-37776
chr10:105879931-105880901	chr10	+	105879945	105880858	True	NM_000494,NM_145247,NM_001002759	chr10,chr10,chr10	-,+,+	COL17A1,MEIR5,MEIR5	-34307,957,1070
chr22:45066032-45066239	chr22	+	45066042	45066220	True	NM_032287,NM_001198721,NM_001017528,NM_001017529,NM_001017530,NM_015366	chr22,chr22,chr22,chr22,chr22,chr22	-,+,+,+,+,+	LDOC1L,PRR5,PRR5,PRR5,PRR5,PRR5	-172037,6467,-1666,-1666,6467,6467
chr21:46492206-46492423	chr21	+	46492228	46492360	True	NM_001112,NM_001160230,NR_027292,NM_015834,NR_027674,NR_027672,NR_027673,NM_015833	chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21	+,+,-,+,+,+,+,+	ADARB1,ADARB1,C21orf122,ADARB1,ADARB1,ADARB1,ADARB1,ADARB1	2132,2132,816,2132,2132,2132,2132,2132
chr22:21044714-21044986	chr22	+	21044802	21044882	True	NM_002650,NR_024592	chr22,chr22	-,+	PI4KA,POM121L4P	44123,-1010
chr12:56862354-56862623	chr12	+	56862358	56862666	True	NM_012064,NM_207344	chr12,chr12	-,+	MIP,SPRYD4	-13923,-108
chr19:12434322-12435029	chr19	+	12434322	12434911	True	NM_003437,NM_145276	chr19,chr19	+,-	ZNF136,ZNF563	-160501,9676
chrX:41549907-41550831	chrX	+	41550206	41550818	True	NM_005300,NM_001126054,NM_001097579	chrX,chrX,chrX	+,-,+	GPR34,CASK,GPR34	-2045,231519,-2045
chr20:60794723-60795048	chr20	+	60794768	60794908	True	NM_007232,NM_014835	chr20,chr20	-,+	HRH3,OSBPL2	465,18671
chr16:4587621-4587903	chr16	+	4587643	4587791	True	NM_001199055,NM_001199054,NM_013399,NM_001199056,NM_001145011	chr16,chr16,chr16,chr16,chr16	-,-,-,-,+	C16orf5,C16orf5,C16orf5,C16orf5,LOC342346	1075,730,1075,1075,18699
chr1:248903950-248904382	chr1	+	248903990	248904172	True	NM_001085474,NR_036070	chr1,chr1	-,+	LOC646627,MIR3124	-839,216403
chr19:34895779-34896210	chr19	+	34895869	34895931	True	NR_027620,NM_032346	chr19,chr19	-,+	LOC643719,PDCD2L	172715,-617
chr11:118825951-118826183	chr11	+	118825950	118826166	True	NM_006760,NM_182557	chr11,chr11	+,-	UPK2,BCL9L	841,-44337
chr16:68019100-68019451	chr16	+	68019100	68019214	True	NM_022357,NM_001129758,NM_017803	chr16,chr16,chr16	-,-,+	DPEP3,DPEP3,DUS2L	-4648,-4648,37989
chr17:617257-617504	chr17	+	617327	617463	True	NM_018289,NM_024792,NM_001128159	chr17,chr17,chr17	-,+,-	VPS53,FAM57A,VPS53	683,18383,683
chr12:50306545-50306841	chr12	+	50306598	50306842	True	NM_000486,NM_012306,NR_026948	chr12,chr12,chr12	+,-,-	AQP2,FAIM2,LOC283332	37681,-8838,-952
chr14:103756235-103757140	chr14	+	103756306	103756792	True	NR_033938,NM_001969	chr14,chr14	-,+	LOC100131366,EIF5	-100941,43700
chr11:63604212-63605776	chr11	+	63604488	63605538	True	NM_001039469,NM_001163296,NM_004954,NM_001144936,NM_001163297	chr11,chr11,chr11,chr11,chr11	+,+,+,-,+	MARK2,MARK2,MARK2,C11orf95,MARK2	861,861,861,-68375,861
chr17:27330638-27331381	chr17	+	27330669	27331343	True	NM_001098635,NM_178860,NM_016518	chr17,chr17,chr17	-,-,+	SEZ6,SEZ6,PIPOX	1788,1788,38574
chr6:112574879-112575272	chr6	+	112574878	112575254	True	NM_001013734,NM_001105209,NM_001105208,NM_002290,NM_001105207,NM_001105206	chr6,chr6,chr6,chr6,chr6,chr6	+,-,-,-,-,-	RFPL4B,LAMA4,LAMA4,LAMA4,LAMA4,LAMA4	93277,624,624,624,624,624
chr17:65372887-65373239	chr17	+	65372949	65373213	True	NM_181671,NM_012417,NM_174871	chr17,chr17,chr17	+,+,-	PITPNC1,PITPNC1,PSMD12	710,710,-10228
chr1:76259215-76260494	chr1	+	76259229	76260342	True	NM_004582,NR_003042,NM_080868,NR_002749,NR_002748,NM_002440	chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,+,+,+	RABGGTB,SNORD45C,ASB17,SNORD45A,SNORD45B,MSH4	-7394,-6523,137824,-5706,-4118,2287
chr10:72139799-72140525	chr10	+	72139890	72140574	True	NM_018239,NM_207119,NM_018205,NM_004096	chr10,chr10,chr10,chr10	-,-,-,+	LRRC20,LRRC20,LRRC20,EIF4EBP2	1858,890,1858,23286
chr11:49212722-49213340	chr11	+	49212879	49213192	True	NM_001014986,NR_027044	chr11,chr11	-,+	FOLH1,LOC440040	17083,366887
chr1:27251954-27252665	chr1	+	27252060	27252717	True	NM_021969,NM_006600	chr1,chr1	-,+	NR0B2,NUDC	-11493,-3894
chr15:89455267-89455544	chr15	+	89455321	89455439	True	NM_013227,NM_001114614,NM_005928	chr15,chr15,chr15	+,-,-	ACAN,MFGE8,MFGE8	-108698,1274,1274
chr16:30207101-30207906	chr16	+	30207389	30207595	True	NM_177552,NR_037608,NR_037609,NM_001017390,NM_001014999,NM_001015000,NM_024044,NM_001031827,NR_002454,NM_001039182,NM_178044	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,+,+,-,+,-,+	SULT1A3,SLX1A-SULT1A3,SLX1B-SULT1A4,SULT1A4,SLX1A,SLX1A,SLX1B,BOLA2,LOC606724,BOLA2B,SLX1B	2953,-1690,-1690,2953,-2280,-2280,-2280,-1762,-7439,-1762,-2280
chr16:30207101-30207906	chr16	+	29468047	29468253	False	NM_177552,NR_037608,NR_037609,NM_001017390,NM_001014999,NM_001015000,NM_024044,NM_001031827,NR_002454,NM_001039182,NM_178044	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,+,+,-,+,-,+	SULT1A3,SLX1A-SULT1A3,SLX1B-SULT1A4,SULT1A4,SLX1A,SLX1A,SLX1B,BOLA2,LOC606724,BOLA2B,SLX1B	2953,-1690,-1690,2953,-2280,-2280,-2280,-1762,-7436,-1762,-2280
chr3:125801788-125802292	chr3	+	125801915	125802308	True	NM_017836,NM_001008486,NM_001008485,NM_001012337	chr3,chr3,chr3,chr3	-,-,-,+	SLC41A3,SLC41A3,SLC41A3,ROPN1B	877,877,877,-113938
chr19:38825388-38825747	chr19	+	38825554	38825782	True	NM_001145463,NM_021185	chr19,chr19	-,+	YIF1B,CATSPERG	-18948,660
chr16:768418-770380	chr16	+	768520	769905	True	NM_001031737,NM_023933,NM_032304,NM_024042	chr16,chr16,chr16,chr16	-,+,+,+	CCDC78,FAM173A,HAGHL,METRN	6618,1252,7360,-3398
chr17:42462759-42463323	chr17	+	42462898	42463304	True	NM_000419,NM_002087	chr17,chr17	-,+	ITGA2B,GRN	3619,-40458
chr6:11092712-11093658	chr6	+	11092838	11093624	True	NM_001135575,NM_207582	chr6,chr6	+,-	LOC221710,ERVFRDE1	641,18497
chr11:63662908-63663859	chr11	+	63662971	63663813	True	NM_017490,NM_173587	chr11,chr11	+,-	MARK2,RCOR2	-7036,20553
chr16:31891165-31893079	chr16	+	31891489	31892343	True	NR_002827,NM_003414	chr16,chr16	-,+	HERC2P4,ZNF267	271581,-6462
chr1:26702346-26703638	chr1	+	26702674	26703416	True	NM_001114759,NM_024674,NM_173574	chr1,chr1,chr1	-,+,-	ZNF683,LIN28A,ZNF683	-3408,33852,-3408
chr5:36241131-36241394	chr5	+	36241182	36241260	True	NM_001085411,NM_153013,NM_032637	chr5,chr5,chr5	-,-,+	C5orf33,C5orf33,SKP2	690,1048,-89044
chr19:54464282-54465278	chr19	+	54464307	54465050	True	NM_198481,NM_031895	chr19,chr19	-,+	VSTM1,CACNG8	102207,1239
chr1:25594505-25594729	chr1	+	25594504	25594700	True	NM_001127691,NM_020317,NM_016124	chr1,chr1,chr1	+,-,+	RHD,C1orf63,RHD	4280,-20519,4280
chr8:57306878-57307372	chr8	+	57307251	57307343	True	NM_006211,NM_024300	chr8,chr8	-,+	PENK,CHCHD7	51300,-182988
chr12:6931140-6931523	chr12	+	6931291	6931543	True	NM_014262,NM_031299,NM_019858,NM_014449	chr12,chr12,chr12,chr12	+,-,+,+	LEPREL2,CDCA3,GPR162,GPR162	6028,28963,-379,-379
chr6:109871444-109871785	chr6	+	109871481	109871822	True	NM_001164313,NM_003080	chr6,chr6	-,+	ZBTB24,SMPD2	-67041,-109606
chr3:122283508-122284079	chr3	+	122283595	122284081	True	NM_031458,NM_138287,NM_001146106,NM_001146105,NM_001146104,NM_001146103,NM_001146102	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-,-	PARP9,DTX3L,PARP9,PARP9,PARP9,PARP9,PARP9	-72,-461,-401,-448,-401,-72,-448
chr14:35426634-35428221	chr14	+	35426883	35427379	True	NR_002937,NM_182648	chr14,chr14	+,-	C14orf19,BAZ1A	-17806,-82030
chr21:45282709-45284108	chr21	+	45283304	45284110	True	NR_026961,NM_020132	chr21,chr21	-,+	LOC284837,AGPAT3	-50856,1005
chrX:2848220-2848821	chrX	+	2848247	2848789	True	NM_009589,NM_001011719,NM_001669	chrX,chrX,chrX	-,+,-	ARSD,ARSH,ARSD	-855,75864,-855
chr6:26017652-26018871	chr6	+	26017682	26018866	True	NM_005325,NM_003544,NM_003529,NM_003538	chr6,chr6,chr6,chr6	-,-,+,+	HIST1H1A,HIST1H4B,HIST1H3A,HIST1H4A	76,8664,1851,3040
chr5:851389-851890	chr5	+	851569	851871	True	NM_001166260,NM_024786	chr5,chr5	+,-	TRIP13,ZDHHC11	41097,-468
chr9:75552357-75553453	chr9	+	75552361	75553159	True	NM_000700,NM_000689	chr9,chr9	+,-	ANXA1,ALDH1A1	213621,15132
chr1:212965314-212965831	chr1	+	212965313	212965687	True	NM_001042553,NM_001042552,NM_001146170,NM_001146171,NM_001146169,NM_001042549,NM_015471	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-,-	TATDN3,TATDN3,TATDN3,TATDN3,TATDN3,NSL1,NSL1	-194,-194,-194,-194,-194,-174,-174
chr11:46938528-46938765	chr11	+	46938646	46938780	True	NM_001003676,NM_002334	chr11,chr11	+,-	C11orf49,LRP4	19470,1443
chr9:115244247-115244882	chr9	+	115244520	115244832	True	NR_036085,NM_133465	chr9,chr9	-,+	MIR3134,KIAA1958	-131975,4415
chrX:153942903-153944502	chrX	+	153943033	153944438	True	NM_001081573,NM_001142463	chrX,chrX	-,+	GAB3,DKC1	34967,46592
chr12:123012282-123013480	chr12	+	123012335	123013366	True	NR_036436,NM_014708,NR_036434,NR_036435,NM_023012	chr12,chr12,chr12,chr12,chr12	-,+,-,-,-	RSRC2,KNTC1,RSRC2,RSRC2,RSRC2	-775,-577,-775,-775,-775
chr5:139173067-139174205	chr5	+	139173289	139174191	True	NM_032289,NM_001184935	chr5,chr5	+,-	PSD2,NRG2	1214,248743
chr2:131861508-131862486	chr2	+	131861543	131862451	True	NM_001100623,NM_017958,NM_001009993	chr2,chr2,chr2	+,+,-	PLEKHB2,PLEKHB2,FAM168B	-32,-32,-10539
chr6:152128513-152128803	chr6	+	152128608	152128800	True	NM_017909,NM_000125,NM_001122741,NM_001122740	chr6,chr6,chr6,chr6	-,+,+,+	RMND1,ESR1,ESR1,ESR1	-355292,13,-1851,-205
chr13:45916992-45917467	chr13	+	45917084	45917342	True	NR_002967,NM_003295,NR_024458	chr13,chr13,chr13	-,-,+	SNORA31,TPT1,LOC100190939	-5340,-1787,-1655
chr8:145596390-145597070	chr8	+	145596453	145597047	True	NM_024555,NM_174922	chr8,chr8	-,+	FBXL6,ADCK5	-14321,683
chr2:220407162-220407713	chr2	+	220407224	220407671	True	NR_036082,NM_001005209,NM_001195731,NM_024536	chr2,chr2,chr2,chr2	-,+,-,-	MIR3132,TMEM198,CHPF,CHPF	6251,1073,201,869
chr13:53104397-53104885	chr13	+	53104643	53104929	True	NM_016075,NR_002793	chr13,chr13	-,+	VPS36,TPTE2P3	-79880,-41573
chr13:53104397-53104885	chr13	-	52855954	52856240	False	NM_001098525,NR_033775	chr13,chr13	+,-	CKAP2,TPTE2P2	173254,7936
chr9:118656522-118657781	chr9	+	118656555	118657643	True	NM_002581,NR_024032	chr9,chr9	+,-	PAPPA,C9orf27	258427,29784
chr14:50055767-50057019	chr14	+	50055888	50056894	True	NR_037792,NR_037793,NM_001032,NM_203467,NM_001030001,NM_152329	chr14,chr14,chr14,chr14,chr14,chr14	+,+,-,+,-,+	LRR1,LRR1,RPS29,LRR1,RPS29,LRR1	8520,8520,-2794,8520,-2794,8520
chr8:26158224-26159007	chr8	+	26158418	26158744	True	NM_001177591,NM_007257,NM_002717	chr8,chr8,chr8	+,-,+	PPP2R2A,PNMA2,PPP2R2A	-7748,212795,-9473
chr5:135364860-135365290	chr5	+	135364975	135365251	True	NM_000358,NR_030583	chr5,chr5	+,-	TGFBI,VTRNA2-1	-442,51085
chr8:22857500-22857718	chr8	+	22857536	22857650	True	NM_003842,NM_015178,NM_001160037	chr8,chr8,chr8	-,+,+	TNFRSF10B,RHOBTB2,RHOBTB2	69100,-495,-4226
chr20:43441532-43442323	chr20	+	43441583	43442177	True	NM_182970,NM_022358	chr20,chr20	-,+	RIMS4,KCNK15	-2671,-67146
chr14:32416595-32417734	chr14	+	32416686	32417672	True	NR_027263,NM_001030055	chr14,chr14	-,+	C14orf128,ARHGAP5	128283,128822
chr4:170679190-170680313	chr4	+	170679229	170679956	True	NM_173872,NM_017867	chr4,chr4	+,-	CLCN3,C4orf27	-137558,-136
chr11:61158838-61159254	chr11	+	61159003	61159135	True	NM_001173990,NM_001173991,NM_153611,NM_016499	chr11,chr11,chr11,chr11	+,+,-,+	TMEM216,TMEM216,CYBASC3,TMEM216	696,696,-29248,729
chr6:33293066-33293526	chr6_qbl_hap6	+	4525509	4525604	False	NM_001145338,NM_001350,NM_001141970,NM_005453,NM_001185181,NM_001141969	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	-,-,-,-,+,-	ZBTB22,DAXX,DAXX,ZBTB22,PFDN6,DAXX	-7543,-2467,-2467,-7750,-35910,-2467
chr6:33293066-33293526	chr6_mcf_hap5	+	4766994	4767089	False	NM_001145338,NM_001350,NM_001141970,NM_005453,NM_001185181,NM_001141969	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	-,-,-,-,+,-	ZBTB22,DAXX,DAXX,ZBTB22,PFDN6,DAXX	-7532,-2459,-2459,-7739,-35894,-2459
chr6:33293066-33293526	chr6_cox_hap2	+	4737077	4737172	False	NM_001145338,NM_001350,NM_001141970,NM_005453,NM_001185181,NM_001141969	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	-,-,-,-,+,-	ZBTB22,DAXX,DAXX,ZBTB22,PFDN6,DAXX	-7543,-2466,-2466,-7750,-35907,-2466
chr6:33293066-33293526	chr6	+	33293253	33293348	True	NR_024517,NM_001350,NM_001145338,NM_001185181,NM_005453,NM_001141970,NM_001141969	chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,+,-,-,-	DAXX,DAXX,ZBTB22,PFDN6,ZBTB22,DAXX,DAXX	-2460,-2460,-7534,-35897,-7741,-2460,-2460
chr6:33293066-33293526	chr6_dbb_hap3	+	4574585	4574680	False	NM_001145338,NM_001350,NM_001141970,NM_005453,NM_001185181,NM_001141969	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	-,-,-,-,+,-	ZBTB22,DAXX,DAXX,ZBTB22,PFDN6,DAXX	-7542,-2465,-2465,-7749,-35903,-2465
chr15:25435059-25435676	chr15	+	25435063	25435469	True	NR_003308,NR_003358,NR_003298,NR_003305,NR_003344,NR_003351,NR_003299,NM_130838,NR_003300,NR_003301,NR_003302,NR_003303,NR_003304,NR_003297,NR_003306	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,-,+,+,+,+,+,+,+	SNORD115-16,SNORD115-43,SNORD115-6,SNORD115-13,SNORD115-29,SNORD115-36,SNORD115-7,UBE3A,SNORD115-8,SNORD115-9,SNORD115-10,SNORD115-11,SNORD115-12,SNORD115-5,SNORD115-14	9125,-553,-9470,2998,-553,-553,-7582,215234,-5661,1093,1093,-553,1093,1096,4598
chr1:228676329-228676530	chr1	+	228676361	228676573	True	NM_001010858,NM_033445	chr1,chr1	+,-	RNF187,HIST3H2A	-1344,-30801
chr3:109036583-109036948	chr3	+	109036719	109036873	True	NM_138815,NM_001145553	chr3,chr3	-,+	DPPA2,FLJ25363	-1355,91963
chr10:1779451-1779878	chr10	+	1779497	1779795	True	NR_033387,NM_018702	chr10,chr10	+,-	NCRNA00168,ADARB2	-210723,-1
chr7:121943974-121944181	chr7	+	121943983	121944157	True	NM_001160264,NM_001024613,NR_036484	chr7,chr7,chr7	-,-,+	FEZF1,FEZF1,LOC154860	458,458,-322
chr5:137879484-137881386	chr5	+	137879607	137881231	True	NM_004730,NM_001964	chr5,chr5	-,+	ETF1,EGR1	-675,-78477
chr14:50356965-50357635	chr14	+	50357340	50357500	True	NM_004713,NM_001663	chr14,chr14	-,+	NEMF,ARF6	-37801,2235
chr6:106958479-106958706	chr6	+	106958487	106958715	True	NM_032730,NM_001624	chr6,chr6	-,+	RTN4IP1,AIM1	118708,1014
chr17:5322636-5322886	chr17	+	5322637	5322919	True	NR_027685,NM_001160243,NM_001160244,NR_027681,NM_001160246,NR_027680,NM_001033002,NM_002532,NR_027682,NR_027684,NR_027683,NM_001160266,NM_001160267,NR_027678,NR_027679	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,+,+,-,+,+,+,+,+,+,+	RPAIN,RPAIN,RPAIN,RPAIN,RPAIN,RPAIN,RPAIN,NUP88,RPAIN,RPAIN,RPAIN,RPAIN,RPAIN,RPAIN,RPAIN	41,41,41,41,41,41,41,190,41,41,41,41,41,41,41
chr2:39455410-39455808	chr2	+	39455458	39455748	True	NR_037875,NM_001009565	chr2,chr2	+,-	LOC728730,CDKL4	208808,975
chr3:52005606-52006175	chr3	+	52005640	52005950	True	NM_001174100,NR_027476,NM_033010,NM_001146314,NM_015407,NR_037192,NM_033008,NM_032750,NM_020418	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,+,+,-,-,-	PCBP4,ABHD14B,PCBP4,ABHD14B,ABHD14A,ABHD14A-ACY1,PCBP4,ABHD14B,PCBP4	-4158,2756,-8732,2756,3091,3091,-4158,2756,-4190
chrX:70798632-70798984	chrX	+	70798722	70798990	True	NM_052957,NM_001142797	chrX,chrX	+,-	ACRC,CXCR3	-899,39427
chr12:76478944-76479443	chr12	+	76479095	76479347	True	NM_004537,NM_139207,NM_006851	chr12,chr12,chr12	-,-,+	NAP1L1,NAP1L1,GLIPR1	-357,-357,-604633
chr1:219778208-219779883	chr6	-	66018155	66019578	False	NR_026540,NM_198283	chr6,chr6	+,-	MCART3P,EYS	478193,270178
chr1:219778208-219779883	chr1	+	219778265	219779688	True	NM_138794,NM_018713	chr1,chr1	+,-	LYPLAL1,SLC30A10	-431133,322363
chr16:21832757-21833064	chr16	+	21832770	21832833	True	NM_170664,NR_003370	chr16,chr16	+,-	OTOA,RRN3P1	-116537,-2275
chr16:21832757-21833064	chr16	-	29086013	29086076	False	NM_024816,NR_003369	chr16,chr16	-,+	RABEP2,RRN3P2	-149481,86
chr14:105886060-105886311	chr14	+	105886164	105886342	True	NM_004689,NM_001203258,NM_001519	chr14,chr14,chr14	+,+,-	MTA1,MTA1,BRF1	-29,-29,-118835
chr14:21753618-21754307	chr14	+	21753831	21754149	True	NM_020366,NM_031314	chr14,chr14	+,-	RPGRIP1,HNRNPC	1986,-16193
chr15:43658650-43658984	chr15	+	43658691	43659025	True	NM_014444,NM_152455	chr15,chr15	+,-	TUBGCP4,ZSCAN29	4287,3283
chr2:99225316-99225521	chr2	+	99225323	99225461	True	NM_001008215,NM_014044	chr2,chr2	-,+	C2orf64,UNC50	-368,-340
chr7:151754685-151755510	chr7	+	151754684	151755387	True	NM_022087,NM_016203	chr7,chr7	+,-	GALNT11,PRKAG2	-31959,-180368
chr14:23771180-23771452	chr14	+	23771268	23771448	True	NM_001199864,NM_001199839,NM_004050,NR_026862	chr14,chr14,chr14,chr14	+,+,+,-	BCL2L2-PABPN1,BCL2L2,BCL2L2,PPP1R3E	4522,4620,4522,659
chr12:116708567-116709321	chr12	+	116708955	116709089	True	NR_027345,NM_015335	chr12,chr12	+,-	NCRNA00173,MED13L	262137,5960
chr5:95158386-95159148	chr5	+	95158483	95159057	True	NR_026936,NM_002064,NM_001118890	chr5,chr5,chr5	+,-,-	C5orf27,GLRX,GLRX	28878,-10,-10
chr9:139938761-139939144	chr9	+	139938761	139939189	True	NM_207511,NM_001246,NM_203468,NM_015392	chr9,chr9,chr9,chr9	+,-,-,-	C9orf139,ENTPD2,ENTPD2,NPDC1	-16896,9366,9366,1537
chr1:48457935-48458298	chr1	+	48457936	48458264	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	4348,230092
chr11:72140872-72142648	chr11	+	72140977	72142683	True	NM_001567,NM_030813	chr11,chr11	+,-	INPPL1,CLPB	-205146,2935
chr3:20090649-20090882	chr3	+	20090686	20090886	True	NM_003884,NR_027694	chr3,chr3	+,-	KAT2B,C3orf48	-9213,-36921
chr16:71929326-71929580	chr16	+	71929451	71929603	True	NM_014761,NM_001201556	chr16,chr16	+,-	KIAA0174,ZNF821	-56,-11358
chr12:99525655-99526138	chr12	+	99525708	99526153	True	NM_181869,NM_020140	chr12,chr12	+,-	APAF1,ANKS1B	-486681,22475
chr3:111289660-111289939	chr19	-	45389454	45391394	True	NM_145288,NM_006114,NM_001128916,NM_001128917	chr19,chr19,chr19,chr19	-,+,+,+	ZNF296,TOMM40,TOMM40,TOMM40	190234,3082,3082,3082
chr16:27324093-27324339	chr16	+	27324183	27324377	True	NM_000418,NM_001008699,NM_145080	chr16,chr16,chr16	+,+,-	IL4R,IL4R,NSMCE1	873,873,-44070
chr7:42972205-42972455	chr7	+	42972233	42972378	True	NM_031903,NM_002787	chr7,chr7	+,-	MRPL32,PSMA2	-346,-428
chr7:142657477-142658156	chr7	+	142657584	142658178	True	NM_000420,NM_178829	chr7,chr7	-,+	KEL,C7orf34	1375,-21033
chr19:9784132-9785113	chr19	+	9784258	9784974	True	NM_001048241,NM_017656,NM_001130032,NM_001130031	chr19,chr19,chr19,chr19	+,-,-,-	UBL5,ZNF562,ZNF562,ZNF562	153593,852,852,852
chr10:75632969-75633175	chr10	+	75632982	75633188	True	NM_001222,NM_172171,NM_172170,NM_172173,NM_001204492,NM_001145031,NM_172169	chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,-,+,-	CAMK2G,CAMK2G,CAMK2G,CAMK2G,CAMK2G,PLAU,CAMK2G	1211,1211,1211,1211,1211,37673,1211
chr8:42749866-42751056	chr8	+	42750123	42751029	True	NM_001160223,NM_001160224,NM_001160225,NM_032410,NM_030954,NR_027669,NR_027668	chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,+,-,-,-	RNF170,RNF170,RNF170,HOOK3,RNF170,RNF170,RNF170	887,887,887,1003,887,887,887
chrX:30635776-30636159	chrX	+	30635776	30635942	True	NM_000167,NM_025159	chrX,chrX	+,-	GK,CXorf21	35533,-39743
chr1:155826986-155827268	chr1	+	155827046	155827224	True	NM_001037533,NM_032292,NM_152280	chr1,chr1,chr1	-,-,+	GON4L,GON4L,SYT11	-74,-74,2035
chrY:26980022-26980322	chrY	+	26980081	26980371	True	NM_020364,NM_020420,NM_001005375,NM_001005786,NM_001005785	chrY,chrY,chrY,chrY,chrY	+,+,+,+,+	DAZ3,DAZ4,DAZ4,DAZ2,DAZ2	-165,-165,-165,-142,-142
chrY:26980022-26980322	chrY	-	26959234	26959524	False	NM_020364,NM_001005375,NM_020420	chrY,chrY,chrY	-,+,-	DAZ3,DAZ4,DAZ4	165,20442,165
chrY:26980022-26980322	chrY	-	25344849	25345139	False	NM_020364,NM_020420,NM_001005375,NM_004081	chrY,chrY,chrY,chrY	+,-,-,-	DAZ3,DAZ4,DAZ4,DAZ1	20441,165,165,150
chrY:26980022-26980322	chrY	+	25365695	25365985	False	NM_020364,NM_020420,NM_001005786,NM_001005785,NM_020363	chrY,chrY,chrY,chrY,chrY	+,+,+,+,+	DAZ3,DAZ4,DAZ2,DAZ2,DAZ2	-165,-165,-142,-142,-142
chr4:104023286-104024792	chr4	+	104023583	104024438	True	NM_020139,NM_001008388	chr4,chr4	-,+	BDH2,CISD2	-2559,-233510
chr3:4792551-4793076	chr3	+	4792622	4793046	True	NR_004428,NM_003670	chr3,chr3	-,+	EGOT,BHLHE40	278,228050
chr13:23489020-23489709	chr13	+	23489252	23489485	True	NM_000231,NR_033774	chr13,chr13	+,-	SGCG,BASP1P1	265574,-16932
chr7:55432889-55433158	chr7	+	55432889	55433154	True	NM_018697,NM_030796	chr7,chr7	+,-	LANCL2,VOPP1	-12,207096
chr10:11654024-11655759	chr10	+	11654254	11655568	True	NM_014688,NM_024693	chr10,chr10	-,+	USP6NL,ECHDC3	-575,128787
chr9:100938003-100939470	chr9	+	100938311	100939483	True	NM_018946,NM_003389	chr9,chr9	+,-	NANS,CORO2A	-119404,-3137
chr2:62131439-62131917	chr2	+	62131573	62131939	True	NM_006430,NM_152516	chr2,chr2	-,+	CCT4,COMMD1	-15782,863
chr19:57014417-57015211	chr19	+	57014636	57015046	True	NM_020813,NR_030740	chr19,chr19	+,-	ZNF471,ZNF667	4165,-25866
chrX:101396621-101396961	chrX	+	101396692	101396862	True	NM_001006938,NM_080390	chrX,chrX	-,+	TCEAL6,TCEAL2	576,-16083
chr15:101399717-101400228	chr15	+	101399855	101400277	True	NM_001040616,NM_000693	chr15,chr15	-,+	LINS,ALDH1A3	-257410,19731
chr17:43972641-43972987	chr17_ctg5_hap1	-	894567	894803	False	NM_016835,NM_016834,NM_005910,NR_024559,NM_001123067,NM_001123066,NM_016841,NR_024560,NM_001203251,NM_001203252	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	-,-,-,+,-,-,-,-,-,-	MAPT,MAPT,MAPT,LOC100128977,MAPT,MAPT,MAPT,LOC100130148,MAPT,MAPT	1077,1077,1077,-60,1077,1077,1077,-143,1077,1077
chr17:43972641-43972987	chr17	+	43972769	43973005	True	NM_016835,NM_016834,NM_005910,NR_024559,NM_001123067,NM_001123066,NM_016841,NR_024560,NM_001203251,NM_001203252	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,-,+,+,+,+,+,+	MAPT,MAPT,MAPT,LOC100128977,MAPT,MAPT,MAPT,LOC100130148,MAPT,MAPT	-1072,-1072,-1072,60,-1072,-1072,-1072,143,-1072,-1072
chr2:96929259-96930293	chr2	+	96929504	96930310	True	NM_004804,NM_017849,NM_001193304	chr2,chr2,chr2	+,-,-	CIAO1,TMEM127,TMEM127	1573,1491,1491
chr9:114360865-114361409	chr9	+	114361065	114361378	True	NM_001015882,NM_012212,NM_001146109,NM_001146108	chr9,chr9,chr9,chr9	+,-,-,-	DNAJC25,PTGR1,PTGR1,PTGR1	32253,383,807,807
chr8:37707473-37708589	chr8	+	37707533	37708529	True	NM_018310,NM_032777	chr8,chr8	-,+	BRF2,GPR124	-102,-53183
chr2:85982568-85982781	chr2	+	85982574	85982712	True	NM_198843,NM_032827	chr2,chr2	-,+	SFTPB,ATOH8	-86710,-1716
chr8:17550998-17552031	chr8	+	17551021	17551903	True	NM_020749,NM_006207	chr8,chr8	-,+	MTUS1,PDGFRL	3394,-117130
chr8:67043418-67044610	chr8	+	67043502	67044397	True	NM_000756,NM_184086,NM_184085,NM_033058,NM_184087	chr8,chr8,chr8,chr8,chr8	-,+,+,+,+	CRH,TRIM55,TRIM55,TRIM55,TRIM55	46499,-4276,-4276,-4276,-4276
chr20:34252125-34252614	chr20	+	34252129	34252511	True	NM_080748,NM_152838,NM_001198863,NM_006047,NM_001198838,NR_037188,NM_152928,NM_152925,NM_152926,NM_152927,NM_001198840	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,-,-,-,-,-,-,-,-,-,-	ROMO1,RBM12,CPNE1,RBM12,RBM12,CPNE1,CPNE1,CPNE1,CPNE1,CPNE1,RBM12	34720,417,417,417,417,398,417,417,417,417,417
chr10:124893239-124893988	chr10	+	124893293	124893988	True	NM_022466,NM_001105574	chr10,chr10	-,+	IKZF5,HMX3	-124982,1578
chr1:204329220-204331004	chr1	+	204329340	204330782	True	NM_001204171,NR_027022,NM_014935	chr1,chr1,chr1	+,-,-	MDM4,LOC127841,PLEKHA6	154724,8115,-296
chr4:108906298-108907832	chr4	+	108906300	108907851	True	NM_005327,NM_001166119,NM_001184705	chr4,chr4,chr4	+,-,+	HADH,LEF1,HADH	3018,180152,3018
chr12:49689878-49690320	chr12	+	49689977	49690317	True	NM_001008223,NM_006262	chr12,chr12	-,+	C1QL4,PRPH	40704,-1119
chr9:19895355-19895636	chr9	+	19895403	19895647	True	NM_020344,NM_001010887	chr9,chr9	-,+	SLC24A2,ACER2	-106812,-486530
chr19:40321372-40322491	chr19	+	40321484	40322394	True	NM_006484,NM_004714,NM_001143832,NM_006483	chr19,chr19,chr19,chr19	-,-,+,-	DYRK1B,DYRK1B,LEUTX,DYRK1B	2497,2497,-54302,2497
chr6:22569879-22570122	chr6	+	22569887	22570035	True	NM_001163558,NM_138574	chr6,chr6	-,+	PRL,HDGFL1	-266805,-260
chr1:155036690-155037282	chr1	+	155036782	155037304	True	NM_182689,NM_144622,NM_182690,NM_005227	chr1,chr1,chr1,chr1	+,-,+,+	EFNA4,DCST2,EFNA4,EFNA4	-620,-30525,-620,-620
chr6:165440770-165441510	chr6	+	165440902	165441533	True	NM_144980,NR_027284	chr6,chr6	-,+	C6orf118,LOC441177	281628,959505
chr15:71094690-71095213	chr15	+	71094718	71095226	True	NM_018003,NM_001199017	chr15,chr15	-,+	UACA,LRRC49	-38868,89701
chr6:27100368-27100914	chr6	+	27100566	27100868	True	NM_021064,NM_003495,NM_021058	chr6,chr6,chr6	+,+,-	HIST1H2AG,HIST1H4I,HIST1H2BJ	-22,6219,9
chr8:21817387-21819282	chr8	+	21817445	21819125	True	NM_003974,NM_015024	chr8,chr8	-,+	DOK2,XPO7	-46240,-40316
chr13:33760213-33761351	chr13	+	33760486	33761316	True	NM_004795,NM_178007	chr13,chr13	+,-	KL,STARD13	-169975,-270
chr10:32046738-32048195	chr10	+	32046998	32048127	True	NM_001174094,NM_018287	chr10,chr10	+,-	ZEB1,ARHGAP12	-436986,169693
chr20:24929392-24929952	chr20	+	24929565	24929773	True	NM_003650,NM_020531	chr20,chr20	+,-	CST7,C20orf3	92,43702
chrX:47232234-47232677	chrX	+	47232612	47232726	True	NM_003446,NM_007130	chrX,chrX	+,-	ZNF157,ZNF41	-2670,109669
chr4:89381681-89383411	chr4	+	89381717	89383409	True	NM_016323,NM_001042616	chr4,chr4	+,-	HERC5,PIGY	-3507,61596
chr1:78479882-78480704	chr1	+	78480095	78480715	True	NM_007034,NM_003902	chr1,chr1	+,-	DNAJB4,FUBP1	-9522,-35318
chr22:38241519-38242951	chr22	+	38241518	38242852	True	NR_030395,NM_138797,NM_016091,NR_036556,NR_030396	chr22,chr22,chr22,chr22,chr22	-,-,+,-,-	MIR658,ANKRD54,EIF3L,ANKRD54,MIR659	-1140,-1165,2517,-1165,991
chr22:22989765-22990087	chr22	+	22989871	22989937	True	NM_199127,NR_024591	chr22,chr22	+,-	GGTLC2,POM121L1P	-1140,-2859
chr22:22989765-22990087	chr22	+	25024466	25024532	False	NR_024593,NR_024494	chr22,chr22	-,+	POM121L10P,BCRP3	30632,4349
chr5:179246265-179246509	chr5	+	179246359	179246491	True	NM_014275,NM_003900	chr5,chr5	-,+	MGAT4B,SQSTM1	-12407,1350
chr9:72375293-72375965	chr9	+	72375336	72375816	True	NM_001099666,NM_001010940	chr9,chr9	-,+	PTAR1,C9orf135	-460,59914
chr5:139507031-139508192	chr5	+	139507031	139508213	True	NM_001007189,NM_013983	chr5,chr5	+,-	C5orf53,NRG2	-1562,-84147
chr11:57421740-57422199	chr11	+	57421872	57421998	True	NM_145008,NM_006831,NM_001142597	chr11,chr11,chr11	-,+,+	YPEL4,CLP1,CLP1	-4455,3217,3217
chr17:9690083-9691115	chr17	+	9690194	9691001	True	NM_001105571,NM_004246	chr17,chr17	-,+	DHRS7C,GLP2R	3657,38379
chr5:138775777-138776264	chr5	+	138775856	138776256	True	NM_001033112,NM_152686	chr5,chr5	+,-	PAIP2,DNAJC18	-97776,-642
chr17:40337409-40337706	chr17	+	40337414	40337754	True	NR_024573,NM_012285,NM_033194,NM_032484,NM_001524,NM_001142622,NM_001142623	chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,-,-,-,-	GHDC,KCNH4,HSPB9,GHDC,HCRT,GHDC,GHDC	8551,-4118,-62709,8846,36,8846,8846
chr17:2203331-2204856	chr17	+	2203571	2204715	True	NM_021947,NM_001170957,NM_017575	chr17,chr17,chr17	+,-,-	SRR,SMG6,SMG6	2532,2161,2417
chr10:60106069-60107702	chr10	+	60106069	60107760	True	NM_152230,NM_003338	chr10,chr10	-,+	IPMK,UBE2D1	-78375,-11381
chr14:50583393-50584538	chr14	+	50583466	50584584	True	NM_024558,NM_001040662,NM_015684	chr14,chr14,chr14	-,-,+	METTL21D,METTL21D,ATP5S	-169,-169,194462
chr4:57371599-57371882	chr4	+	57371599	57371865	True	NM_002703,NM_206919	chr4,chr4	-,+	PPAT,ARL9	-69797,-275
chr1:77397948-77399381	chr1	+	77397956	77399295	True	NM_005482,NM_030965	chr1,chr1	-,+	PIGK,ST6GALNAC5	285888,-64828
chr3:52002143-52002449	chr3	+	52002148	52002432	True	NM_001174100,NM_001146314,NM_033010,NR_027476,NM_015407,NR_037192,NM_033008,NM_032750,NM_020418	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,+,+,-,-,-	PCBP4,ABHD14B,PCBP4,ABHD14B,ABHD14A,ABHD14A-ACY1,PCBP4,ABHD14B,PCBP4	-666,6264,-5240,6264,6609,6609,-666,6264,-698
chr13:91999113-91999469	chr13	+	91999181	91999450	True	NR_029490,NR_029492,NR_029508,NR_029489,NR_029488,NR_029487,NR_027039,NR_027349,NR_027350	chr13,chr13,chr13,chr13,chr13,chr13,chr13,chr13,chr13	+,+,+,+,+,+,-,+,+	MIR19B1,MIR20A,MIR92A1,MIR19A,MIR18A,MIR17,LOC144776,MIR17HG,MIR17HG	3995,3868,4117,3694,3554,3408,-420330,623,623
chr10:103112564-103113860	chr10	+	103112971	103113650	True	NM_006562,NM_003939,NM_033637	chr10,chr10,chr10	-,+,+	LBX1,BTRC,BTRC	-124254,174,174
chr13:61034048-61035010	chr13	+	61034121	61034865	True	NM_001042517,NM_001146070	chr13,chr13	-,+	DIAPH3,TDRD3	-296002,-62749
chr18:57025788-57026104	chr18	+	57025890	57026020	True	NM_005570,NM_002091	chr18,chr18	-,+	LMAN1,GRP	538,-138541
chr12:105725259-105725462	chr12	+	105725264	105725463	True	NM_018171,NM_001145199	chr12,chr12	-,+	APPL2,C12orf75	-95256,-901
chr7:73257938-73258666	chr7	+	73258104	73258672	True	NM_001305,NM_152559	chr7,chr7	+,-	CLDN4,WBSCR27	-12963,-1249
chr12:5280879-5281187	chr12	+	5280918	5281226	True	NM_006422,NM_002234	chr12,chr12	-,+	AKAP3,KCNA5	-526575,-127887
chr4:188860811-188862123	chr4	+	188861081	188861937	True	NM_173553,NM_174900	chr4,chr4	-,+	TRIML2,ZFP42	164521,54987
chr17:74066777-74068235	chr17	+	74067027	74068035	True	NM_180990,NM_014230,NM_003857	chr17,chr17,chr17	+,-,+	ZACN,SRP68,GALR2	7227,624,2856
chr2:73030085-73032019	chr2	+	73030187	73031512	True	NM_015189,NM_003124	chr2,chr2	-,+	EXOC6B,SPR	21715,82999
chr11:6791853-6793583	chr11	+	6792008	6793484	True	NM_001004490,NM_001004489	chr11,chr11	-,+	OR2AG2,OR2AG1	-1820,12763
chr18:55869630-55871278	chr18	+	55869683	55871190	True	NM_001144970,NM_005603	chr18,chr18	+,-	NEDD4L,ATP8B1	-7097,-399356
chr1:6617335-6618701	chr1	+	6617387	6618471	True	NM_177540,NM_024654,NM_138697	chr1,chr1,chr1	+,-,+	TAS1R1,NOL9,TAS1R1	-2100,-2729,-2100
chr17:55335303-55335977	chr17	+	55335544	55335874	True	NM_004645,NM_138962,NM_170721	chr17,chr17,chr17	-,+,+	COIL,MSI2,MSI2	-297133,-1665,-1222
chr16:19127348-19128795	chr16	+	19127538	19128788	True	NM_001034841,NM_015092,NR_028028	chr16,chr16,chr16	+,-,+	ITPRIPL2,SMG1,ITPRIPL2	-2336,-189812,-2336
chr3:77126642-77128559	chr3	+	77126770	77128592	True	NM_001128929,NM_001128223	chr3,chr3	+,-	ROBO2,ZNF717	18570,-1292515
chr3:36955715-36956533	chr3	+	36956007	36956275	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	30323,78565
chr5:14579326-14581219	chr5	+	14579606	14581019	True	NM_019018,NR_037899	chr5,chr5	+,-	FAM105A,LOC100128508	871,196172
chr19:3538209-3538459	chr19	+	3538304	3538374	True	NM_001135580,NM_001042680	chr19,chr19	+,-	C19orf71,C19orf28	780,19247
chr1:220266431-220267340	chr1	+	220266579	220267125	True	NM_006085,NM_018060	chr1,chr1	-,+	BPNT1,IARS2	-3388,329
chr3:93780902-93781647	chr3	+	93781005	93781687	True	NM_001195643,NM_022072,NM_176815	chr3,chr3,chr3	-,+,-	DHFRL1,NSUN3,DHFRL1	430,167,194
chr17:6555553-6556268	chr17	+	6555668	6556237	True	NM_016060,NM_001105520	chr17,chr17	-,+	MED31,C17orf100	-714,-662
chr4:25028527-25030343	chr4	+	25028627	25030218	True	NR_037934,NM_018176	chr4,chr4	+,-	LOC285540,LGI2	132075,2246
chr1:17338549-17338851	chr1	+	17338584	17338764	True	NM_014675,NM_001141974,NM_001141973,NM_022089	chr1,chr1,chr1,chr1	+,-,-,-	CROCC,ATP13A2,ATP13A2,ATP13A2	-90190,-161,-161,-161
chr7:72300471-72300966	chr7	+	72300653	72300853	True	NR_001588,NR_024110,NR_024111,NR_024109,NM_001145441,NM_001145440	chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,-,-	SBDSP1,SBDSP1,SBDSP1,SBDSP1,TYW1B,TYW1B	-753,-753,-753,-753,-1840,-1840
chrX:2419870-2420477	chrY	+	2370166	2370246	False	NM_001171135,NM_001171136,NM_004729,NM_145177,NR_033381	chrY,chrY,chrY,chrY,chrY	-,-,-,-,+	ZBED1,ZBED1,ZBED1,DHRSX,CD99P1	-1586,-1158,-1158,-1151,107059
chrX:2419870-2420477	chrX	+	2420166	2420246	True	NM_001171135,NM_001171136,NM_004729,NM_145177,NR_033381	chrX,chrX,chrX,chrX,chrX	-,-,-,-,+	ZBED1,ZBED1,ZBED1,DHRSX,CD99P1	-1586,-1158,-1158,-1151,107059
chr12:56367294-56367964	chr12	+	56367296	56367806	True	NM_001798,NM_002868,NM_001200053,NM_006928,NM_001200054,NM_052827	chr12,chr12,chr12,chr12,chr12,chr12	+,+,-,-,-,+	CDK2,RAB5B,PMEL,PMEL,PMEL,CDK2	-6791,55,-7450,-6800,-7450,-6791
chr12:114844358-114845010	chr12	+	114844709	114845003	True	NM_181486,NM_080718,NM_000192,NM_080717,NM_138432	chr12,chr12,chr12,chr12,chr12	-,-,-,-,+	TBX5,TBX5,TBX5,TBX5,SDSL	-820,-3006,1294,1294,-984544
chr19:1399929-1400551	chr19	+	1400324	1400590	True	NM_138924,NM_018959,NM_170711,NM_000156	chr19,chr19,chr19,chr19	-,+,+,-	GAMT,DAZAP1,DAZAP1,GAMT	1012,6993,6993,1012
chr1:197882732-197883136	chr1	+	197882826	197883183	True	NM_001014434,NM_001195216,NM_020204	chr1,chr1,chr1	+,-,+	LHX9,DENND1B,LHX9	-1242,-138203,3333
chr4:174291523-174291841	chr4	+	174291527	174291789	True	NM_007281,NM_003864	chr4,chr4	-,+	SCRG1,SAP30	28878,303
chr12:113658151-113658618	chr12	+	113658412	113658573	True	NM_138451,NM_017901,NM_001143819	chr12,chr12,chr12	-,+,+	IQCD,TPCN1,TPCN1	358,686,686
chr16:67467146-67467558	chr16	+	67467237	67467453	True	NM_013304,NM_000196	chr16,chr16	-,+	ZDHHC1,HSD11B2	-16898,-2252
chr15:65810129-65810776	chr15	+	65810356	65810509	True	NM_130434,NM_017743,NM_197961,NM_197960,NM_016395	chr15,chr15,chr15,chr15,chr15	-,-,-,-,+	DPP8,DPP8,DPP8,DPP8,PTPLAD1	-321,-321,-321,-747,12317
chr11:18350295-18350855	chr11	+	18350472	18350872	True	NM_007216,NM_005316,NM_181508,NM_001142307,NM_181507	chr11,chr11,chr11,chr11,chr11	-,+,-,+,-	HPS5,GTF2H1,HPS5,GTF2H1,HPS5	-6751,-6711,-6751,-6711,-6751
chr1:206224585-206225070	chr1	+	206224629	206225107	True	NM_000707,NM_001007544	chr1,chr1	+,-	AVPR1B,C1orf186	-397,63590
chr7:131439993-131440599	chr7	+	131440002	131440311	True	NM_005397,NM_013255	chr7,chr7	-,+	PODXL,MKLN1	-198626,-427467
chr6:79942167-79943340	chr6	+	79942173	79943251	True	NM_001201363,NM_001201362,NM_001010844,NM_004242,NM_138730	chr6,chr6,chr6,chr6,chr6	-,-,+,-,-	HMGN3,HMGN3,IRAK1BP1,HMGN3,HMGN3	1254,1254,-365035,1254,1254
chr16:67995489-67996276	chr16	+	67995547	67996177	True	NM_001145961,NM_001145962,NM_001145963,NM_001145964,NM_005072,NM_017803	chr16,chr16,chr16,chr16,chr16,chr16	-,-,-,-,-,+	SLC12A4,SLC12A4,SLC12A4,SLC12A4,SLC12A4,DUS2L	6470,6470,1841,4654,6470,61026
chr3:159706122-159706545	chr3	+	159706167	159706467	True	NM_000882,NM_001190242	chr3,chr3	+,-	IL12A,IFT80	155,395137
chr2:62788790-62790457	chr2	+	62788800	62790496	True	NM_198276,NM_001142615	chr2,chr2	-,+	TMEM17,EHBP1	-55196,110489
chr15:65823537-65823994	chr15	+	65823568	65823850	True	NM_197961,NM_016395	chr15,chr15	-,+	DPP8,PTPLAD1	-13533,-798
chr12:20865683-20866104	chr12	+	20865777	20866019	True	NM_021094,NM_017435	chr12,chr12	-,+	SLCO1A2,SLCO1C1	621871,-17429
chr7:33086506-33087950	chr7	+	33086746	33087764	True	NM_016489,NM_001166118,NM_001033604	chr7,chr7,chr7	-,-,+	NT5C3,NT5C3,BBS9	-6224,-6225,81387
chr6:55998333-56000115	chr6	+	55998350	56000132	True	NM_030820,NM_207410	chr6,chr6	-,+	COL21A1,GFRAL	112303,-806145
chr14:74351712-74352495	chr14	+	74352003	74352450	True	NM_152445,NM_021188	chr14,chr14	-,+	FAM161B,ZNF410	64444,1135
chr11:63742428-63742741	chr11	+	63742505	63742589	True	NM_004074,NM_173587	chr11,chr11	+,-	COX8A,RCOR2	-477,-58189
chr19:16583708-16584624	chr19	+	16583806	16584482	True	NM_021235,NM_032207	chr19,chr19	-,+	EPS15L1,C19orf44	-1044,22722
chr11:113934165-113935218	chr11	+	113934198	113935084	True	NM_020886,NM_001018011,NM_006006	chr11,chr11,chr11	-,+,+	USP28,ZBTB16,ZBTB16	-187942,-2961,-3818
chr5:79597626-79598582	chr5	+	79597730	79598472	True	NM_032567,NR_004845	chr5,chr5	+,-	SPZ1,LOC644936	17317,-1433
chr5:81034838-81036511	chr5	+	81035073	81036542	True	NM_001131028,NM_012446	chr5,chr5	+,-	ATG10,SSBP2	231301,10587
chr8:52704205-52704438	chr8	+	52704249	52704493	True	NM_144651,NM_005285	chr8,chr8	-,+	PXDNL,NPBWR1	17574,1147974
chr8:28244803-28245859	chr8	+	28244808	28245795	True	NM_018660,NM_006228	chr8,chr8	-,+	ZNF395,PNOC	-831,-70210
chr4:139937898-139938472	chr4	+	139938167	139938313	True	NM_006874,NM_012118	chr4,chr4	-,+	ELF2,CCRN4L	67384,-1282
chr17:40334517-40335985	chr17	+	40334640	40335985	True	NM_001524,NM_033194,NM_012285	chr17,chr17,chr17	-,+,-	HCRT,HSPB9,KCNH4	1535,-59935,-1344
chr6:18127676-18129374	chr6	+	18127718	18129386	True	NM_153042,NM_198586	chr6,chr6	+,-	KDM1B,NHLRC1	26232,-4867
chr11:18807669-18808042	chr11	+	18807668	18807738	True	NM_153347,NM_001039970,NM_032781,NM_006906	chr11,chr11,chr11,chr11	+,-,-,-	TMEM86A,PTPN5,PTPN5,PTPN5	-87368,5703,5703,5703
chr8:19672781-19673993	chr8	+	19672941	19673864	True	NR_024040,NM_018142	chr8,chr8	-,+	CSGALNACT1,INTS10	-132680,1053
chr21:38070439-38070663	chr21	+	38070464	38070692	True	NM_001146077,NM_005069,NM_009586	chr21,chr21,chr21	-,+,+	CLDN14,SIM2,SIM2	-121597,1298,1298
chr2:201933960-201935095	chr2	+	201934070	201934748	True	NM_002491,NM_173822	chr2,chr2	+,-	NDUFB3,FAM126B	1713,1703
chr14:95030210-95031989	chr14	+	95030360	95031836	True	NM_006215,NM_173850	chr14,chr14	+,-	SERPINA4,SERPINA12	-2628,-46179
chr10:81321818-81322302	chr10	+	81321847	81322226	True	NM_001093770,NM_001098668	chr10,chr10	+,-	SFTPA1,SFTPA2	48468,-1684
chr1:36538558-36538845	chr1	+	36538557	36538723	True	NM_005202,NM_014466	chr1,chr1	-,+	COL8A2,TEKT2	27185,10952
chr2:172951209-172951499	chr2	+	172951286	172951528	True	NM_178120,NM_001038493,NM_004405	chr2,chr2,chr2	+,+,-	DLX1,DLX1,DLX2	-1129,-1129,16000
chr7:130126725-130127577	chr7	+	130126887	130127482	True	NR_029899,NR_004382,NM_177525,NM_177524,NM_002402	chr7,chr7,chr7,chr7,chr7	+,-,+,+,+	MIR335,MESTIT1,MEST,MEST,MEST	8469,3587,3690,-892,4455
chr11:86124176-86125507	chr11	+	86124712	86125357	True	NM_001014811,NM_021827	chr11,chr11	-,+	ME3,CCDC81	257942,-38992
chr1:218518664-218518884	chr1	+	218518676	218518878	True	NM_003238,NM_018040,NM_001135599	chr1,chr1,chr1	+,-,+	TGFB2,GPATCH2,TGFB2	-51,-714267,-51
chr16:10277097-10277311	chr16	+	10277104	10277358	True	NM_024997,NM_001134408,NM_001134407,NM_000833	chr16,chr16,chr16,chr16	+,-,-,-	ATF7IP2,GRIN2A,GRIN2A,GRIN2A	245366,-1180,-841,-493
chr4:39698971-39699358	chr4	+	39699008	39699398	True	NM_005339,NM_174921,NM_001111112,NM_001111113	chr4,chr4,chr4,chr4	+,-,+,+	UBE2K,C4orf34,UBE2K,UBE2K	265,-58527,265,265
chr15:91075935-91076263	chr15	+	91075939	91076027	True	NM_001042574,NR_028287,NM_022769	chr15,chr15,chr15	+,-,+	CRTC3,GABARAPL3,CRTC3	-2792,-183260,-2792
chr1:109422409-109423781	chr1	+	109422470	109423793	True	NM_013296,NM_152763	chr1,chr1	+,-	GPSM2,AKNAD1	-2918,-22754
chr1:63154191-63154463	chr1	+	63154250	63154502	True	NM_033407,NM_014495	chr1,chr1	-,+	DOCK7,ANGPTL3	-281,-91114
chr18:47015359-47015851	chr18	+	47015601	47015755	True	NM_001199341,NM_001199356,NM_001199343,NM_001199355,NM_001199345,NM_001199344,NM_001199346,NM_001035006,NM_001035005,NR_031720,NM_000985,NM_001199342,NM_001199340,NR_002571,NR_002572,NR_002573,NR_003701	chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18	-,-,-,-,-,-,-,-,-,+,-,-,-,-,-,-,-	RPL17,RPL17-C18ORF32,RPL17,RPL17-C18ORF32,RPL17,RPL17,C18orf32,RPL17,C18orf32,MIR1539,RPL17,RPL17,RPL17,SNORD58A,SNORD58B,U58,SNORD58C	3131,3232,3131,2251,3232,3131,-1957,3232,-1957,-1915,3232,3131,3232,2014,2396,13,-9
chr1:193027716-193027954	chr1	+	193027759	193027967	True	NM_001173525,NM_001173524,NM_001199262,NM_001199263,NM_001199261,NM_015984,NR_033393,NM_004600,NM_001042369,NM_001042370	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,-,-,-,+,+,+,+	TROVE2,TROVE2,UCHL5,UCHL5,UCHL5,UCHL5,TROVE2,TROVE2,TROVE2,TROVE2	1036,584,606,606,606,606,584,1036,1036,1036
chr16:67694462-67694686	chr16	+	67694467	67694653	True	NM_022914,NM_001082487,NM_001082486,NM_016948,NM_001012984,NM_032140,NM_001037281	chr16,chr16,chr16,chr16,chr16,chr16,chr16	-,-,-,+,+,-,+	ACD,ACD,ACD,PARD6A,C16orf86,C16orf48,PARD6A	115,115,115,197,6063,6025,197
chr9:138985314-138985631	chr9	+	138985358	138985468	True	NM_015597,NM_144653	chr9,chr9	+,-	GPSM1,NACC2	236463,1713
chr5:171705940-171706978	chr5	+	171706138	171706848	True	NM_001171183,NM_152277	chr5,chr5	+,-	EFCAB9,UBTD2	-85013,3997
chr4:47890237-47891526	chr4	+	47890447	47891545	True	NM_152995,NM_207330	chr4,chr4	-,+	NFXL1,NIPAL1	25138,127245
chr13:115082583-115083957	chr13	+	115083112	115083792	True	NM_001164145,NM_001164144,NM_007368	chr13,chr13,chr13	+,+,-	ZNF828,ZNF828,RASA3	-3206,-3206,-185017
chr1:36691395-36692153	chr1	+	36691394	36691866	True	NM_014408,NM_005119	chr1,chr1	-,+	TRAPPC3,THRAP3	-76327,-1436
chr17:66014746-66015084	chr17	+	66014978	66015048	True	NM_002266,NM_181656	chr17,chr17	+,-	KPNA2,C17orf58	16799,-25213
chr22:37257269-37257500	chr22	+	37257289	37257443	True	NM_013416,NM_000631,NM_002854	chr22,chr22,chr22	+,+,-	NCF4,NCF4,PVALB	-310,-310,-41772
chr12:52800104-52800647	chr12	+	52800187	52800673	True	NM_002284,NM_033033	chr12,chr12	+,-	KRT86,KRT82	-104597,-11
chr9:69181266-69181485	chr9	+	69181265	69181396	True	NR_015361,NM_001098805	chr9,chr9	-,+	LOC440896,ANKRD20A4	-224,200584
chr9:69181266-69181485	chr9	-	70938167	70938298	False	NR_015423,NM_199135	chr9,chr9	-,+	LOC572558,FOXD4L3	34509,-20436
chr1:1241278-1241595	chr1	+	1241286	1241620	True	NM_030649,NM_153339	chr1,chr1	-,+	ACAP3,PUSL1	1699,2373
chrX:54209584-54209845	chrX	+	54209622	54209702	True	NM_198456,NM_058163,NM_017848	chrX,chrX,chrX	-,+,-	FAM120C,TSR2,FAM120C	62,257150,62
chr10:82108940-82109980	chr10	+	82108964	82110005	True	NM_138812,NM_032372	chr10,chr10	-,+	DYDC1,DYDC2	6558,6552
chr2:183985028-183986963	chr2	+	183985236	183986182	True	NM_138285,NM_205842	chr2,chr2	+,-	NUP35,NCKAP1	2900,-82007
chr17:6985644-6986268	chr17	+	6985909	6986164	True	NM_182906,NM_006344,NM_201566	chr17,chr17,chr17	-,-,+	CLEC10A,CLEC10A,SLC16A13	-2309,-2309,-46566
chr15:52263305-52263727	chr15	+	52263322	52263620	True	NM_138792,NM_002748	chr15,chr15	-,+	LEO1,MAPK6	388,47790
chr17:79633995-79634301	chr17	+	79634056	79634290	True	NM_199287,NM_001039842	chr17,chr17	+,-	CCDC137,C17orf90	-346,-438
chr12:130645643-130645935	chr12	+	130645668	130645928	True	NR_033834,NM_007197	chr12,chr12	-,+	FLJ31485,FZD10	345,1075
chr6:52940700-52941992	chr6	+	52940831	52942000	True	NM_012347,NM_016513	chr6,chr6	+,-	FBXO9,ICK	-5123,-14231
chr1:120837833-120838064	chr1	+	120837840	120838102	True	NM_001004340,NM_001100910	chr1,chr1	-,+	FCGR1B,FAM72B	97892,902
chr1:120837833-120838064	chr1	-	143914016	143914278	False	NM_207418,NR_034178	chr1,chr1	-,+	FAM72D,SRGAP2P2	-873,1469
chr1:120837833-120838064	chr1	+	206137321	206137583	False	NM_001123168,NM_001007544	chr1,chr1	+,-	FAM72A,C1orf186	1327,151114
chr14:71788181-71788397	chr14	+	71788257	71788347	True	NR_001276,NM_033141	chr14,chr14	+,-	SNORD56B,MAP3K9	76706,-512369
chrX:15665375-15666856	chrX	+	15665580	15666530	True	NM_020665,NR_026551	chrX,chrX	-,+	TMEM27,CA5BP1	16674,26508
chrX:15665375-15666856	chrX	+	15721881	15722464	False	NM_020665,NR_026551	chrX,chrX	-,+	TMEM27,CA5BP1	-38727,-28893
chr16:68132363-68133106	chr16	+	68132562	68133048	True	NM_173165,NM_018380	chr16,chr16	+,-	NFATC3,DDX28	-13351,-74792
chr1:217803930-217804266	chr1	+	217803929	217804169	True	NM_138796,NM_018040	chr1,chr1	+,-	SPATA17,GPATCH2	525,290
chr1:50622424-50623284	chr1	+	50622501	50623248	True	NM_032785,NM_021952	chr1,chr1	-,+	AGBL4,ELAVL4	-132875,-47965
chr7:108634744-108635929	chr7	+	108634771	108635856	True	NM_001024607,NM_012328	chr7,chr7	-,+	C7orf66,DNAJB9	-110134,-424646
chr6:166757820-166759097	chr6	+	166757871	166759117	True	NM_145169,NR_027284	chr6,chr6	-,+	SFT2D1,LOC441177	-1880,-356891
chr6:35480438-35481096	chr6	+	35480450	35480971	True	NM_003322,NM_007104	chr6,chr6	-,+	TULP1,RPL10A	-19,-44323
chr20:35979498-35980749	chr20	+	35979847	35980727	True	NM_198291,NM_021081,NM_005417	chr20,chr20,chr20	+,-,+	SRC,GHRH,SRC	-5342,-94548,-6811
chr8:22847958-22848670	chr8	+	22848151	22848645	True	NM_015178,NM_001160037,NM_001160036,NM_144962	chr8,chr8,chr8,chr8	+,+,+,-	RHOBTB2,RHOBTB2,RHOBTB2,PEBP4	8446,4715,-3272,-62730
chr1:38517308-38517591	chr1	+	38517334	38517586	True	NM_002699,NR_037432	chr1,chr1	-,+	POU3F1,MIR3659	-4884,37316
chr19:17447608-17447830	chr19	+	17447722	17447878	True	NM_133644,NM_001195422,NM_001128855,NM_020959,NM_032620	chr19,chr19,chr19,chr19,chr19	+,+,+,-,+	GTPBP3,GTPBP3,GTPBP3,ANO8,GTPBP3	447,-1982,447,-2084,447
chr17:80483348-80484123	chr17	+	80483360	80484108	True	NR_036519,NM_004514	chr17,chr17	-,+	C17orf62,FOXK2	-74653,-5821
chr22:39854347-39855237	chr22	+	39854502	39855064	True	NM_002409,NM_194326	chr22,chr22	+,-	MGAT3,RPS19BP1	-1228,73846
chr10:52363060-52364903	chr10	+	52363167	52364690	True	NM_147156,NM_001079516	chr10,chr10	-,+	SGMS1,ASAH2B	19097,135017
chr5:78992752-78994699	chr5	+	78992999	78994528	True	NM_004272,NM_153610	chr5,chr5	-,+	HOMER1,CMYA5	-183299,-7404
chr3:159707288-159708444	chr3	+	159707758	159708478	True	NM_000882,NM_001190242	chr3,chr3	+,-	IL12A,IFT80	-1186,393126
chr3:10029294-10030954	chr3	+	10029509	10030891	True	NM_018447,NM_033084	chr3,chr3	-,+	TMEM111,FANCD2	-987,37221
chr17:26220593-26221278	chr17	+	26220594	26221231	True	NM_001076680,NM_016231	chr17,chr17	-,+	C17orf108,NLK	-185,148456
chr1:180885615-180885891	chr1	+	180885660	180885904	True	NM_020950,NM_005819	chr1,chr1	+,-	KIAA1614,STX6	-3398,106192
chr17:39782680-39783045	chr17	+	39782783	39782849	True	NM_005801,NM_000422	chr17,chr17	+,-	EIF1,KRT17	62277,-1901
chr6:32097182-32097851	chr6_mcf_hap5	+	3477026	3477672	False	NM_001136153,NM_138717,NM_022110,NM_004381	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	-,+,-,-	ATF6B,PPT2,FKBPL,ATF6B	-1181,23379,273,-1181
chr6:32097182-32097851	chr6_dbb_hap3	+	3376370	3377016	False	NM_001136153,NM_138717,NM_022110,NM_004381	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	-,+,-,-	ATF6B,PPT2,FKBPL,ATF6B	-1181,23385,273,-1181
chr6:32097182-32097851	chr6	+	32097198	32097844	True	NM_001136153,NM_138717,NM_022110,NM_004381	chr6,chr6,chr6,chr6	-,+,-,-	ATF6B,PPT2,FKBPL,ATF6B	-1181,23384,273,-1181
chr6:32097182-32097851	chr6_cox_hap2	+	3567858	3568504	False	NM_001136153,NM_138717,NM_022110,NM_004381	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	-,+,-,-	ATF6B,PPT2,FKBPL,ATF6B	-1181,23392,273,-1181
chr1:20466637-20467398	chr1	+	20466675	20467239	True	NM_022819,NM_012400	chr1,chr1	+,-	PLA2G2F,PLA2G2D	-903,-20667
chr6:35768810-35769363	chr6	+	35769009	35769187	True	NM_182548,NM_001832	chr6,chr6	+,-	LHFPL5,CLPS	3883,-3907
chr12:65153409-65153671	chr12	+	65153414	65153695	True	NM_002076,NM_015279	chr12,chr12	-,+	GNS,TBC1D30	-188,64656
chr1:171625674-171626063	chr1	+	171625799	171626105	True	NM_001007239,NM_000261	chr1,chr1	+,-	METTL13,MYOC	124655,-4026
chr7:35839897-35840262	chr7	+	35839897	35840299	True	NM_022373,NM_001788,NM_001011553	chr7,chr7,chr7	-,+,+	HERPUD2,SEPT7,SEPT7	-105125,327,327
chr1:58720974-58721981	chr1	+	58720986	58722018	True	NM_021080,NR_034014	chr1,chr1	-,+	DAB1,LOC100131060	-4775,528804
chr6:45387592-45388078	chr6	+	45387591	45388117	True	NM_004348,NM_181356	chr6,chr6	+,-	RUNX2,SUPT3H	1796,-41921
chr19:19776476-19777400	chr19	+	19777047	19777107	True	NM_020410,NM_033204	chr19,chr19	-,+	ATP13A1,ZNF101	-2544,2555
chrX:37563808-37564559	chrX	+	37564099	37564427	True	NM_021083,NM_006520	chrX,chrX	+,-	XK,DYNLT3	-19030,142512
chr6:80212892-80214275	chr6	+	80212891	80214324	True	NM_031469,NM_001122769	chr6,chr6	+,-	SH3BGRL2,LCA5	126675,32873
chr7:141821270-141822721	chr7	+	141821333	141822589	True	NR_024346,NR_003715	chr7,chr7	-,+	MOXD2P,LOC93432	124358,-9845
chr8:33426580-33427954	chr8	+	33426884	33427569	True	NM_024787,NM_032509	chr8,chr8	-,+	RNF122,MAK16	-2241,-84250
chr11:67797997-67798357	chr11	+	67798026	67798244	True	NM_030930,NM_006019,NM_002496	chr11,chr11,chr11	-,+,+	UNC93B1,TCIRG1,NDUFS8	-26433,8217,7
chrX:135886281-135887827	chrX	+	135886608	135887573	True	NM_004840,NM_000074	chrX,chrX	-,+	ARHGEF6,CD40LG	-23105,-156333
chr2:132176191-132177144	chr2	+	132176328	132177020	True	NR_002826,NR_036499	chr2,chr2	-,+	LOC401010,LOC389043	25498,-15905
chr2:101998209-101999385	chr2	+	101998268	101999290	True	NM_017546,NM_153836	chr2,chr2	+,-	C2orf29,CREG2	-128974,4726
chr9:139248445-139248899	chr9	+	139248534	139248948	True	NM_001200003,NM_001145639,NM_001080849	chr9,chr9,chr9	+,+,-	GPSM1,GPSM1,DNLZ	303,-1076,9343
chr11:64529112-64529377	chr11	+	64529112	64529246	True	NM_006244,NM_001164716,NM_005609	chr11,chr11,chr11	+,-,-	PPP2R5B,PYGM,PYGM	162896,-925,-925
chr22:50987688-50987958	chr22	+	50987687	50987881	True	NM_001123225,NM_138433	chr22,chr22	-,+	C22orf41,KLHDC7B	13497,-1276
chr1:17699761-17700077	chr1	+	17699806	17699974	True	NM_001136204,NM_207421	chr1,chr1	-,+	RCC2,PADI6	65133,-1116
chr17:79760775-79761372	chr17	+	79760783	79761287	True	NM_000160,NM_001093767	chr17,chr17	+,-	GCGR,FAM195B	722,29930
chr17:34209233-34209802	chr17	+	34209378	34209674	True	NM_002985,NM_003487	chr17,chr17	-,+	CCL5,TAF15	-2001,-72948
chr12:54453006-54453405	chr12	+	54453007	54453443	True	NM_153633,NR_026655,NR_026658	chr12,chr12,chr12	+,+,-	HOXC4,FLJ12825,LOC100240735	-5397,-1020,22214
chr1:108224525-108225620	chr1	+	108224570	108225642	True	NM_001079874,NM_014917	chr1,chr1	-,+	VAV3,NTNG1	5540,-541885
chr7:14807145-14807864	chr7	+	14807514	14807910	True	NM_001195280,NM_004080	chr7,chr7	+,-	LOC100506049,DGKB	1758594,73215
chr10:96310501-96311047	chr10	+	96310662	96311021	True	NM_022451,NM_018063	chr10,chr10	-,+	NOC3L,HELLS	-187979,-5144
chr11:67157344-67157705	chr11	+	67157478	67157716	True	NM_001008709,NM_004584	chr11,chr11	-,+	PPP1CA,RAD9A	11710,1706
chr12:133466257-133466867	chr12	+	133466689	133466895	True	NM_018223,NM_019591,NM_001161346,NM_001161347,NM_001161344,NM_001161345	chr12,chr12,chr12,chr12,chr12,chr12	-,+,-,-,-,-	CHFR,ZNF26,CHFR,CHFR,CHFR,CHFR	-2485,96160,-2485,-2485,-2485,-2485
chr15:23254597-23255501	chr15	+	23254878	23255302	True	NR_024074,NR_003521	chr15,chr15	+,-	GOLGA8IP,WHAMML1	-61,-46521
chr15:23254597-23255501	chr15	-	28957506	28957760	False	NR_033351,NR_026589	chr15,chr15	-,+	GOLGA8F,WHAMML2	-179363,24968
chr2:105650151-105650705	chr2	+	105650389	105650755	True	NR_037883,NM_182640	chr2,chr2	-,+	LOC100506421,MRPS9	-182455,3727
chr11:107047233-107047467	chr11	+	107047245	107047507	True	NM_001130037,NM_000855	chr11,chr11	+,-	ELMOD1,GUCY1A2	414309,-158074
chr4:13549085-13549290	chr4	+	13549128	13549266	True	NR_015450,NM_001189,NR_003132	chr4,chr4,chr4	-,-,+	LOC285548,NKX3-2,HSP90AB2P	232,-3014,-214142
chr12:10317058-10317582	chr12	+	10317059	10317571	True	NM_153022,NM_001172632,NM_001172633,NM_002543	chr12,chr12,chr12,chr12	+,-,-,-	C12orf59,OLR1,OLR1,OLR1	13985,7269,7269,7269
chr11:66824989-66826396	chr11	+	66825001	66826328	True	NM_014578,NM_001040716	chr11,chr11	+,-	RHOD,PC	-763,-99154
chrX:18467268-18468054	chrX	+	18467297	18467783	True	NM_001037343,NR_033717	chrX,chrX	+,-	CDKL5,SCML2	-7011,-94453
chr2:128782230-128783822	chr2	+	128782609	128783791	True	NM_024545,NM_020120,NM_001145928	chr2,chr2,chr2	-,+,-	SAP130,UGGT1,SAP130	1129,64962,1129
chr20:44657555-44657839	chr20	+	44657739	44657877	True	NM_001134771,NM_022095,NM_020708	chr20,chr20,chr20	+,-,+	SLC12A5,ZNF335,SLC12A5	-7461,-56906,-23
chr11:123524427-123524650	chr11	+	123524534	123524608	True	NM_020716,NM_001040151,NM_018400	chr11,chr11,chr11	+,-,-	GRAMD1B,SCN3B,SCN3B	-128057,757,757
chr1:47611772-47612952	chr1	+	47611811	47613001	True	NM_005764,NM_001010969	chr1,chr1	-,+	PDZK1IP1,CYP4A22	42828,-8755
chr14:101037942-101038214	chr14	+	101038117	101038215	True	NR_024096,NM_001159531,NM_020836	chr14,chr14,chr14	+,-,-	C14orf70,BEGAIN,BEGAIN	85389,-3710,-1986
chr16:30007182-30007462	chr16	+	30007225	30007403	True	NM_003609,NM_173618	chr16,chr16	-,+	HIRIP3,INO80E	59,127
chr19:41882096-41882415	chr19	+	41882108	41882288	True	NM_001098824,NM_030578,NM_001098821,NM_001098822,NM_001098823,NM_001042595	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+	TMEM91,B9D2,TMEM91,TMEM91,TMEM91,TMEM91	149,-12030,149,149,149,880
chr1:155146783-155147088	chr1	+	155146801	155147000	True	NM_025058,NM_173852	chr1,chr1	+,-	TRIM46,KRTCAP2	-492,-997
chr9:138439133-138439475	chr9	+	138439255	138439445	True	NM_014582,NM_144654	chr9,chr9	+,-	OBP2A,C9orf116	-1321,-47494
chr19:18499686-18500323	chr19	+	18499692	18500152	True	NM_145256,NM_004864,NR_036156	chr19,chr19,chr19	-,+,+	LRRC25,GDF15,MIR3189	8313,-2775,-2371
chr4:110837002-110837356	chr4	+	110837056	110837394	True	NM_001178131,NM_001178130,NM_001963,NM_000204	chr4,chr4,chr4,chr4	+,+,+,-	EGF,EGF,EGF,CFI	-3067,-3067,-3067,-113721
chr20:44718712-44718983	chr20	+	44718715	44719007	True	NM_020967,NM_001250	chr20,chr20	-,+	NCOA5,CD40	-135,27898
chr7:128432108-128433872	chr7	+	128432133	128433574	True	NM_001201372,NM_001708,NM_022742	chr7,chr7,chr7	+,-,+	CCDC136,OPN1SW,CCDC136	-720,-16289,-134
chr16:52581607-52583314	chr16	+	52581732	52583357	True	NM_001080430,NM_025134,NM_001146188	chr16,chr16,chr16	-,+,-	TOX3,CHD9,TOX3	-926,505587,-18
chr7:121513643-121513850	chr7	+	121513642	121513792	True	NM_002851,NM_005763	chr7,chr7	+,-	PTPRZ1,AASS	-534,270602
chr16:30536707-30537046	chr16	+	30536925	30537041	True	NM_023931,NM_024671,NM_002209	chr16,chr16,chr16	-,-,+	ZNF747,ZNF768,ITGAL	9203,919,-52994
chr8:144329440-144330281	chr8	+	144329481	144329961	True	NM_173832,NM_052963,NM_001130478	chr8,chr8,chr8	+,-,-	ZFP41,TOP1MT,LY6H	-423,87139,-87428
chr19:49495102-49495398	chr19	+	49495105	49495307	True	NM_001161587,NM_006666,NR_027763,NM_002103	chr19,chr19,chr19,chr19	-,+,-,-	GYS1,RUVBL2,GYS1,GYS1	1353,1848,1353,1353
chr3:74558827-74559090	chr3	+	74558847	74559145	True	NR_031714,NM_020872	chr3,chr3	+,-	MIR1324,CNTN3	1120768,11254
chr16:2828810-2829252	chr16	+	2828873	2829239	True	NM_152891,NM_001135086,NM_007108,NM_207013	chr16,chr16,chr16,chr16	-,+,-,-	PRSS33,PRSS41,TCEB2,TCEB2	7519,19246,-1576,-1576
chr1:23695454-23695773	chr1	+	23695458	23695820	True	NR_033691,NR_033690,NM_001077195,NM_030634	chr1,chr1,chr1,chr1	+,+,-,-	C1orf213,C1orf213,ZNF436,ZNF436	48,-45,587,-579
chr1:151963484-151964938	chr1	+	151963561	151964846	True	NR_024237,NM_002966	chr1,chr1	+,-	LOC100132111,S100A10	-152670,1918
chr1:51791587-51793459	chr1	+	51791689	51793231	True	NM_001080494,NM_014372	chr1,chr1	-,+	TTC39A,RNF11	-3751,-89795
chrX:134049397-134050428	chrX	+	134049626	134050431	True	NM_019556,NM_001163438	chrX,chrX	-,+	MOSPD1,LOC644538	-329,74536
chr4:32023891-32024821	chr4	+	32023890	32024577	True	NM_015230,NM_032457	chr4,chr4	-,+	ARAP2,PCDH7	4221453,-1301904
chr19:36707414-36707743	chr19	+	36707565	36707695	True	NM_001042474,NM_007145,NM_152477,NM_001099638,NM_001099639	chr19,chr19,chr19,chr19,chr19	-,+,-,+,+	ZNF565,ZNF146,ZNF565,ZNF146,ZNF146	-1579,-2117,-1999,-2117,-2117
chr12:125480149-125480980	chr12	+	125480205	125480797	True	NM_032656,NM_080626	chr12,chr12	-,+	DHX37,BRI3BP	-6538,-2071
chr8:9413226-9413569	chr8	+	9413278	9413402	True	NM_003747,NR_024281	chr8,chr8	+,-	TNKS,LOC157627	42,347487
chr1:103517203-103518653	chr1	+	103517398	103518689	True	NM_017619,NM_001190709	chr1,chr1	+,-	RNPC3,COL11A1	549888,55413
chr2:87198468-87199338	chr2	+	87198919	87199003	True	NM_001032392,NM_001024457	chr2,chr2	-,+	PLGLB1,RGPD1	50028,-54239
chr2:87198468-87199338	chr2	-	88097559	88097643	False	NM_001078170,NM_001032392	chr2,chr2	-,+	RGPD2,PLGLB1	27700,-50012
chr20:50419246-50421129	chr20	+	50419402	50420941	True	NM_020436,NM_014484	chr20,chr20	-,+	SALL4,MOCS3	-354,-844090
chr3:73670923-73671873	chr3	+	73670956	73671906	True	NM_018029,NM_015009	chr3,chr3	+,-	EBLN2,PDZRN3	-560205,2216
chr2:96873980-96874202	chr2	+	96873997	96874117	True	NM_020151,NM_001037228	chr2,chr2	-,+	STARD7,LOC285033	506,31859
chr1:21836260-21836478	chr1	+	21836274	21836486	True	NM_001177520,NM_001145658,NM_000478,NM_001127501	chr1,chr1,chr1,chr1	+,-,+,+	ALPL,RAP1GAP,ALPL,ALPL	-467,141912,-467,-467
chr17:16342233-16342461	chr17	+	16342234	16342400	True	NR_027178,NR_027166,NR_027167,NR_027164,NR_027165,NR_027162,NR_027163,NR_027160,NR_027161,NR_027168,NR_027169,NR_002744,NR_027667,NR_027158,NR_003043,NR_003054,NR_027175,NR_027174,NR_027177,NR_027176,NR_027171,NR_027170,NR_027173,NR_027172,NR_027179,NR_027159,NM_001113567	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,-	NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,SNORD49A,NCRNA00188,NCRNA00188,SNORD49B,SNORD65,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,C17orf76	16,16,16,16,16,16,16,16,16,16,16,949,16,16,422,2139,16,16,16,16,16,16,16,16,16,16,53130
chr6:3455508-3455777	chr6	+	3455515	3455767	True	NM_015482,NM_001128592	chr6,chr6	-,+	SLC22A23,PSMG4	1076,-196407
chr7:29232449-29233569	chr7	+	29232558	29233597	True	NM_004067,NM_031311	chr7,chr7	+,-	CHN2,CPVL	523,-46405
chr5:34659037-34660494	chr5	+	34659092	34659710	True	NM_001145520,NR_026591,NM_001145522,NM_015577	chr5,chr5,chr5,chr5	+,-,+,+	RAI14,RAD1,RAI14,RAI14	-2547,256078,-2710,-2710
chr6:4706746-4707799	chr6	+	4707060	4707848	True	NR_026590,NM_006638	chr6,chr6	+,-	CDYL,RPP40	-718,296473
chr10:46922754-46923120	chr10	+	46922886	46923143	True	NR_027632,NM_181519	chr10,chr10	+,-	FAM35B,SYT15	-25302,47508
chr10:46922754-46923120	chr10	+	88935070	88935136	False	NM_005271,NM_001099338	chr10,chr10	-,+	GLUD1,FAM22A	-80294,50068
chr10:46922754-46923120	chr10	+	47404954	47405211	False	NR_024495,NR_027634	chr10,chr10	-,+	LOC642826,FAM35B2	-161460,-25291
chr15:62942921-62944244	chr15	+	62942924	62944287	True	NM_015059,NR_026897	chr15,chr15	+,-	TLN2,MGC15885	-3465,-5544
chr17:884517-885446	chr17	+	884615	884897	True	NM_022463,NM_013337	chr17,chr17	-,+	NXN,TIMM22	-1605,15459
chr2:86250095-86251375	chr2	+	86250190	86251314	True	NM_017952,NR_026984	chr2,chr2	+,-	PTCD3,LOC90784	81990,-272
chr18:46067815-46069199	chr18	+	46067929	46069198	True	NM_001190823,NM_001142397,NM_014772	chr18,chr18,chr18	-,+,+	SMAD7,CTIF,CTIF	400029,-2553,-2553
chr8:128177907-128179381	chr8	+	128178038	128179327	True	NM_001159542,NR_024393	chr8,chr8	+,-	POU5F1B,LOC727677	248529,315107
chr16:11438557-11439189	chr16	+	11438900	11439186	True	NM_152308,NM_002761	chr16,chr16	+,-	C16orf75,PRM1	124,-63708
chr9:7477312-7477549	chr9	+	7477371	7477573	True	NM_033428,NM_015061	chr9,chr9	-,+	C9orf123,KDM4C	322276,-719781
chr15:58983132-58984172	chr15	+	58983226	58983776	True	NM_001040450,NR_002927	chr15,chr15	+,-	FAM63B,HSP90AB4P	79616,1598
chr12:110210316-110210770	chr12	+	110210315	110210685	True	NR_026662,NM_032829,NR_026661	chr12,chr12,chr12	-,+,-	MGC14436,C12orf34,MGC14436	657,-58188,654
chr16:19896691-19896968	chr16	+	19896772	19896960	True	NM_153208,NM_016235	chr16,chr16	+,-	IQCK,GPRC5B	-169045,-621
chr2:64977361-64977646	chr2	+	64977374	64977462	True	NM_014755,NR_034023	chr2,chr2	-,+	SERTAD2,LOC339807	-96328,-142979
chr16:3183571-3184275	chr16	+	3183924	3184284	True	NM_004220,NR_024167,NM_001134655	chr16,chr16,chr16	+,-,+	ZNF213,MGC3771,ZNF213	772,-18325,849
chr16:50731223-50732506	chr16	+	50731737	50732539	True	NM_022162,NM_182854	chr16,chr16	+,-	NOD2,SNX20	-738,-16473
chr17:20513624-20514787	chr17	+	20513825	20514823	True	NM_001190790,NR_029393	chr17,chr17	+,-	CDRT15L2,KRT16P3	-30841,-106014
chr17:20513624-20514787	chr17	+	15711325	15711677	False	NM_006470,NR_002211	chr17,chr17	-,+	TRIM16,MEIS3P1	-125132,-21212
chr3:38354637-38355322	chr3	+	38354715	38355263	True	NM_004803,NR_028389	chr3,chr3	+,-	SLC22A14,LOC100128640	-7321,141098
chr11:60674145-60674733	chr11	+	60674217	60674698	True	NM_014502,NM_024092	chr11,chr11	-,+	PRPF19,TMEM109	-156,6672
chr12:47177804-47178369	chr12	+	47177808	47178388	True	NM_138371,NM_001143824	chr12,chr12	+,-	FAM113B,SLC38A4	431663,41448
chr20:48433776-48435118	chr20	+	48433914	48434916	True	NM_001135773,NM_015266	chr20,chr20	-,+	SPATA2,SLC9A8	95424,-4724
chr10:37414459-37414751	chr10	+	37414503	37414633	True	NM_052997,NM_001190489	chr10,chr10	+,-	ANKRD30A,MTRNR2L7	151,477276
chr9:98181172-98182509	chr9	+	98181216	98182202	True	NR_029496,NM_001083607	chr9,chr9	+,-	MIR24-1,PTCH1	-332965,87329
chr21:27005971-27007822	chr21	+	27006327	27007717	True	NM_021219,NM_080794	chr21,chr21	+,-	JAM2,MRPL39	3871,-26526
chr20:43540606-43540832	chr20	+	43540615	43540763	True	NM_006809,NM_001124756	chr20,chr20	-,+	TOMM34,PABPC1L	48403,-1963
chr3:2947055-2948241	chr3	+	2947157	2947969	True	NM_000564,NM_182916	chr3,chr3	-,+	IL5RA,TRNT1	204151,220630
chr4:170927605-170927890	chr4	+	170927704	170927882	True	NM_001009554,NM_173872	chr4,chr4	-,+	MFAP3L,CLCN3	-2769,-386041
chr6:161695024-161695445	chr6	+	161695030	161695478	True	NM_006724,NM_020133	chr6,chr6	+,-	MAP3K4,AGPAT4	-282260,77
chr8:124776243-124776498	chr8	+	124776245	124776482	True	NM_004306,NM_144963	chr8,chr8	-,+	ANXA13,FAM91A1	-26598,4399
chr6:21666797-21667582	chr6	+	21666945	21667614	True	NR_034143,NR_015410	chr6,chr6	-,+	LOC729177,FLJ22536	479858,-321
chr14:51413225-51413799	chr14	+	51413400	51413798	True	NM_181814,NM_002863,NM_001163940	chr14,chr14,chr14	+,-,-	ABHD12B,PYGL,PYGL	-74581,-2152,-2152
chr1:15931400-15932373	chr1	+	15931598	15932267	True	NM_032341,NM_024758	chr1,chr1	+,-	DDI2,AGMAT	11685,-19993
chr16:77230818-77231520	chr16	+	77230870	77231497	True	NM_001129979,NM_014940,NM_199355	chr16,chr16,chr16	+,+,-	SYCE1L,MON1B,ADAMTS18	1851,-6088,237564
chr14:50087166-50087409	chr14	+	50087178	50087404	True	NM_002408,NM_001001	chr14,chr14	+,-	MGAT2,RPL36AL	84,-5
chr4:3075657-3075864	chr4	+	3075668	3075738	True	NM_002111,NM_003703	chr4,chr4	+,-	HTT,NOP14	669,-110550
chr12:54784255-54784490	chr12	+	54784271	54784534	True	NM_001130968,NM_015481,NR_029894,NM_001130967	chr12,chr12,chr12,chr12	-,-,+,-	ZNF385A,ZNF385A,MIR148B,ZNF385A	599,-5790,-53322,599
chr11:96060876-96061182	chr11	+	96060878	96061001	True	NR_036125,NM_032427	chr11,chr11	+,-	MIR1260B,MAML2	13600,15400
chr3:186080120-186080357	chr3	+	186080223	186080299	True	NM_016306,NM_001080744,NM_001080745,NM_001346	chr3,chr3,chr3,chr3	+,-,-,-	DNAJB11,DGKG,DGKG,DGKG	208167,-200,-200,-200
chr14:35012394-35012763	chr14	+	35012405	35012604	True	NM_018453,NR_002937	chr14,chr14	-,+	EAPP,C14orf19	-3462,396523
chr14:35012394-35012763	chr14	-	35028922	35029121	False	NM_018453,NR_002937	chr14,chr14	-,+	EAPP,C14orf19	-19979,380006
chr15:76629160-76629493	chr15	+	76629188	76629534	True	NM_001127716,NM_145805	chr15,chr15	-,+	ETFA,ISL2	-25378,-92
chr14:100709176-100710162	chr14	+	100709259	100709648	True	NM_003403,NM_001039355	chr14,chr14	+,-	YY1,SLC25A29	-4208,63263
chr12:122297061-122297432	chr12	+	122297134	122297478	True	NM_002813,NM_002150	chr12,chr12	+,-	PSMD9,HPD	29167,-365
chr19:39367876-39369101	chr19	+	39368057	39369139	True	NM_198445,NM_001001716,NM_001195833	chr19,chr19,chr19	-,+,-	RINL,NFKBIB,RINL	-170,21475,-170
chr17:79851127-79852208	chr17	+	79851449	79851864	True	NM_016476,NM_005782,NM_001002249,NM_001002248,NM_001002247,NM_001002246,NM_001002245,NM_001002244,NM_148896	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,-,+,+,+,+,+,+,+	ANAPC11,THOC4,ANAPC11,ANAPC11,ANAPC11,ANAPC11,ANAPC11,ANAPC11,NPB	-1903,-1987,-1684,-1903,-1903,-1903,-1903,-1903,8207
chr19:1450258-1450479	chr19	+	1450383	1450527	True	NM_152482,NM_005883	chr19,chr19	-,+	C19orf25,APC2	28751,-286
chr22:20256869-20257799	chr22	+	20257279	20257635	True	NM_023004,NR_026919	chr22,chr22	-,+	RTN4R,LOC150197	-1463,-63475
chr2:219080563-219080861	chr2	+	219080678	219080763	True	NM_000634,NM_005731,NM_152862	chr2,chr2,chr2	-,+,+	CXCR1,ARPC2,ARPC2	-48962,1356,1110
chr13:114541104-114541370	chr13	+	114541135	114541353	True	NM_001143945,NM_001143946,NR_024609	chr13,chr13,chr13	-,-,+	GAS6,GAS6,FLJ44054	-2118,-4421,45256
chr16:48657408-48657915	chr16	+	48657430	48657896	True	NM_153029,NM_031490	chr16,chr16	-,+	N4BP1,LONP2	-13310,-379270
chr19:17393767-17394631	chr19	+	17393884	17394586	True	NM_152363,NM_031941	chr19,chr19	+,-	ANKLE1,USHBP1	-1481,-18340
chr4:41752490-41752854	chr4	+	41752542	41752814	True	NM_001112720,NM_003924	chr4,chr4	+,-	LIMCH1,PHOX2B	-137681,-1555
chr4:153865025-153866225	chr4	+	153865101	153866125	True	NM_033393,NM_145720	chr4,chr4	+,-	FHDC1,TIGD4	-1024,-164185
chr2:61386290-61387593	chr2	+	61386721	61387163	True	NM_001143959,NR_036496	chr2,chr2	+,-	C2orf74,LOC339803	2465,-14611
chr3:125485870-125486257	chr3	+	125485987	125486093	True	NR_024250,NR_031687	chr3,chr3	+,-	LOC100125556,MIR548I1	149350,23352
chr3:184277187-184277436	chr3	+	184277225	184277425	True	NM_022149,NM_004443	chr3,chr3	-,+	MAGEF1,EPHB3	152461,2161
chr19:2053956-2054212	chr19	+	2053979	2054121	True	NM_001031735,NM_017572,NM_199054	chr19,chr19,chr19	+,-,-	IZUMO4,MKNK2,MKNK2	42746,-2736,-2736
chr9:84676169-84676597	chr9	+	84676212	84676346	True	NM_005077,NM_001001670	chr9,chr9	-,+	TLE1,FAM75D1	-372616,-72576
chr8:50823546-50824148	chr8	+	50823557	50824009	True	NM_003068,NM_018967	chr8,chr8	-,+	SNAI2,SNTG1	-989558,587
chr19:47775351-47775581	chr19	+	47775501	47775569	True	NR_037675,NM_178511,NM_001127242	chr19,chr19,chr19	+,+,-	PRR24,PRR24,BBC3	2089,2033,-39478
chr9:26892904-26893923	chr9	+	26892913	26893697	True	NM_024828,NM_001099223,NM_001167575	chr9,chr9,chr9	-,+,-	C9orf82,IFT74,C9orf82	-87,53339,-87
chr9:65595115-65597066	chr9	+	65595169	65597009	True	NR_024496,NM_015667	chr9,chr9	+,-	LOC442421,FAM75A7	897259,-85559
chr9:65595115-65597066	chr9	+	43853598	43855071	False	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	-222868,-168781
chr4:68709562-68710791	chr4	+	68709669	68710817	True	NR_015439,NM_004262	chr4,chr4	+,-	LOC550112,TMPRSS11D	-142732,38950
chr5:89769186-89769408	chr5	+	89769204	89769456	True	NM_006467,NM_203406	chr5,chr5	+,-	POLR3G,MBLAC2	1224,1179
chr8:7819000-7819519	chr8	+	7819103	7819493	True	NR_003668,NR_027424	chr8,chr8	-,+	DEFB109P1B,FAM66E	35600,-6619
chr8:7819000-7819519	chr8	+	12226096	12226485	False	NR_024044,NR_026789	chr8,chr8	-,+	DEFB109P1,FAM66A	31439,-6619
chr8:86125699-86126016	chr8	+	86125806	86125975	True	NM_001099672,NM_001099673,NM_001099670,NM_001099671,NM_001083589	chr8,chr8,chr8,chr8,chr8	-,-,-,-,+	C8orf59,C8orf59,C8orf59,C8orf59,E2F5	6721,6721,6721,6721,-25957
chr17:64960207-64960638	chr17	+	64960258	64960518	True	NM_014877,NM_014405	chr17,chr17	-,+	HELZ,CACNG4	280851,461
chr7:102213259-102213568	chr7	+	102213279	102213615	True	NM_001166339,NM_001097615	chr7,chr7	+,-	SPDYE2L,POLR2J3	-21651,-211
chr7:102213259-102213568	chr7	+	44059005	44059341	False	NM_175064,NR_003655	chr7,chr7	+,-	SPDYE1,POLR2J4	-18567,-257
chr7:102213259-102213568	chr7	+	102119622	102119958	False	NM_006234,NM_152892	chr7,chr7	-,+	POLR2J,LRWD1	-241,-14283
chr7:102213259-102213568	chr7	+	102312352	102312688	False	NM_032959,NM_001166339	chr7,chr7	-,+	POLR2J2,SPDYE2L	-170,-21631
chr20:61446443-61447270	chr20	+	61446599	61447071	True	NM_001853,NM_006602	chr20,chr20	+,-	COL9A3,TCFL5	1342,46094
chr10:101765433-101767145	chr10	+	101765652	101767089	True	NM_015221,NR_024130	chr10,chr10	-,+	DNMBP,DNMBP-AS1	2638,-78750
chr1:43825694-43826958	chr1	+	43825727	43826997	True	NM_022821,NM_001255	chr1,chr1	-,+	ELOVL1,CDC20	6752,-1152
chr7:11859742-11860080	chr7	+	11859845	11860121	True	NM_015204,NM_001134232	chr7,chr7	-,+	THSD7A,TMEM106B	11753,390726
chr2:175630536-175631621	chr2	+	175630535	175631494	True	NM_024583,NM_000079,NM_001039523	chr2,chr2,chr2	+,-,-	SCRN3,CHRNA1,CHRNA1	-370129,-1335,-1335
chr20:6020583-6021076	chr20	+	6020807	6021114	True	NM_001127458,NM_152611	chr20,chr20	+,-	CRLS1,LRRN4	-32967,13635
chr15:34517832-34518251	chr15	+	34517849	34518261	True	NM_024713,NM_016454	chr15,chr15	-,+	C15orf29,TMEM85	-15552,-655
chr9:32784488-32786157	chr9	+	32784785	32786157	True	NM_212558,NM_153809	chr9,chr9	+,-	TMEM215,TAF1L	-1339,-149118
chr19:55790203-55790856	chr19	+	55790389	55790807	True	NM_032430,NM_012267,NM_001130106	chr19,chr19,chr19	+,-,-	BRSK1,HSPBP1,HSPBP1	4726,994,994
chr13:114237597-114237836	chr13	+	114237641	114237829	True	NM_000705,NM_007111,NR_026580	chr13,chr13,chr13	-,+,+	ATP4B,TFDP1,TFDP1	74734,1226,1173
chr11:60172845-60174249	chr11	+	60173065	60174267	True	NM_022349,NM_001079692,NM_032597	chr11,chr11,chr11	-,+,+	MS4A6A,MS4A14,MS4A14	-222391,-9637,-9637
chr19:51566759-51567248	chr19	+	51566784	51567148	True	NM_015596,NM_014441	chr19,chr19	-,+	KLK13,SIGLEC9	1277,60988
chrX:3632334-3632575	chrX	+	3632346	3632561	True	NM_005044,NM_004042	chrX,chrX	-,+	PRKX,ARSF	-671,-647557
chr16:71488758-71489350	chr16	+	71488771	71489267	True	NM_145911,NM_005769	chr16,chr16	-,+	ZNF23,CHST4	6904,70755
chr15:75109140-75109474	chr15	+	75109242	75109402	True	NM_021819,NM_001030005,NM_001099436	chr15,chr15,chr15	+,+,-	LMAN1L,CPLX3,ULK3	-4099,9548,26200
chr19:10118971-10120087	chr19	+	10119050	10119946	True	NM_015719,NM_015725	chr19,chr19	-,+	COL5A3,RDH8	1251,3978
chr3:69828054-69828981	chr3	+	69828057	69828965	True	NM_015123,NM_006722	chr3,chr3	-,+	FRMD4B,MITF	-392627,-15159
chr14:92981721-92982004	chr14	+	92981778	92982006	True	NM_001008530,NM_024832	chr14,chr14	-,+	LGMN,RIN3	233091,-1712
chr3:152878700-152879304	chr3	+	152878762	152879333	True	NM_002886,NM_001123228	chr3,chr3	+,-	RAP2B,TMEM14E	695,-819983
chr5:131991199-131991654	chr5	+	131991207	131991689	True	NM_007054,NM_002188	chr5,chr5	-,+	KIF3A,IL13	81626,2175
chr5:54598252-54599404	chr5	+	54598510	54599328	True	NM_015360,NM_019030	chr5,chr5	+,-	SKIV2L2,DHX29	4247,4243
chr19:7895950-7896930	chr19	+	7896016	7896924	True	NM_145245,NM_001190467	chr19,chr19	+,-	EVI5L,FLJ22184	-906,42452
chrX:102611751-102612156	chrX	+	102611818	102612112	True	NM_016303,NM_001006612,NM_001006613,NM_001006614,NM_032621	chrX,chrX,chrX,chrX,chrX	+,+,+,+,-	WBP5,WBP5,WBP5,WBP5,BEX2	-489,-489,-489,-489,-45844
chr7:4723061-4723449	chr7	+	4723413	4723491	True	NM_020144,NM_001037165	chr7,chr7	-,+	PAPOLB,FOXK1	178184,-1534
chr1:167526790-167527250	chr1	+	167526800	167527282	True	NM_003851,NM_052862	chr1,chr1	-,+	CREG1,RCSD1	-3744,72191
chr17:18376777-18377931	chr17	+	18376884	18377596	True	NR_003554,NM_001040078	chr17,chr17	-,+	LOC220594,LGALS9C	47020,2502
chr17:18376777-18377931	chr17	-	20604744	20604961	False	NM_001190790,NM_001004306	chr17,chr17	+,-	CDRT15L2,CCDC144NL	-121758,194547
chr17:18376777-18377931	chr17	-	20373347	20374059	False	NM_001190790,NM_001042685	chr17,chr17	+,-	CDRT15L2,LGALS9B	108977,-2499
chr4:176985680-176987086	chr4	+	176985731	176986801	True	NM_170710,NM_201592,NM_181265	chr4,chr4,chr4	+,-,+	WDR17,GPM6A,WDR17	183,-62083,183
chr11:3666761-3668474	chr11	+	3666827	3668144	True	NM_001079536,NM_053017,NM_004314	chr11,chr11,chr11	-,-,+	ART5,ART5,ART1	-3281,-3342,-517
chr19:54703905-54704264	chr19	+	54704123	54704201	True	NM_001013,NM_001146082,NM_001077446	chr19,chr19,chr19	+,-,+	RPS9,MBOAT7,TSEN34	524,-10390,-9083
chr1:28695254-28696090	chr1	+	28695542	28696038	True	NM_014280,NM_001048183	chr1,chr1	-,+	DNAJC8,PHACTR4	-136000,54
chr4:170918865-170919286	chr4	+	170918965	170919242	True	NM_001009554,NM_173872	chr4,chr4	-,+	MFAP3L,CLCN3	5743,-377294
chr17:43861079-43861301	chr17_ctg5_hap1	-	1006262	1006386	False	NM_001145146,NM_001145147,NR_024559,NM_004382,NM_001145148	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	-,-,+,-,-	CRHR1,CRHR1,LOC100128977,CRHR1,CRHR1	-379,-379,-111619,-379,-379
chr17:43861079-43861301	chr17	+	43861104	43861266	True	NM_001145146,NM_001145147,NR_024559,NM_004382,NM_001145148	chr17,chr17,chr17,chr17,chr17	+,+,-,+,+	CRHR1,CRHR1,LOC100128977,CRHR1,CRHR1	379,379,111663,379,379
chr16:69985654-69986068	chr16	+	69985822	69986054	True	NM_001136214,NR_003610,NM_182619	chr16,chr16,chr16	+,-,+	CLEC18A,PDXDC2P,CLEC18A	-1247,113847,-1063
chr16:69985654-69986068	chr16	+	70208734	70208966	False	NR_033959,NM_173619	chr16,chr16	-,+	LOC729513,CLEC18C	51020,-857
chr16:69985654-69986068	chr16	-	74454373	74454605	False	NM_001011880,NM_002811	chr16,chr16	-,+	CLEC18B,PSMD7	813,-123751
chr4:147559685-147559921	chr4	+	147559828	147559954	True	NM_032128,NM_004575	chr4,chr4	-,+	SLC10A7,POU4F2	-116705,90
chr19:56166528-56166921	chr19	+	56166881	56166953	True	NM_203374,NM_007279,NM_001012478,NM_013301	chr19,chr19,chr19,chr19	-,+,+,+	ZNF784,U2AF2,U2AF2,CCDC106	-30940,-1516,-1516,-7978
chr20:61048699-61048916	chr20	+	61048718	61048875	True	NM_001024,NM_080473	chr20,chr20	+,-	RPS21,GATA5	-86648,2203
chr3:10332926-10334176	chr3	+	10333081	10334217	True	NM_001134941,NM_001134946,NM_001134944,NM_001134945,NR_026829,NR_024138,NR_004431,NR_024146,NM_016362,NR_024145,NR_024144,NR_024132,NR_024133,NR_024134,NR_024135,NR_024136,NR_024137	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,+,-,+,+,-,+,+,-,-,-,-,-,-	GHRL,GHRL,GHRL,GHRL,C3orf42,GHRL,GHRLOS,GHRLOS,GHRL,GHRLOS,GHRLOS,GHRL,GHRL,GHRL,GHRL,GHRL,GHRL	-662,464,464,464,-7029,464,-5694,-5694,-662,-5694,-5694,464,464,464,464,464,464
chr7:141866826-141868363	chr7	+	141866981	141867912	True	NR_024346,NR_003717	chr7,chr7	-,+	MOXD2P,LOC100124692	79035,3057
chr2:130957045-130957818	chr2	+	130957152	130957370	True	NM_025029,NM_207312	chr2,chr2	+,-	MZT2B,TUBA3E	-17712,-1118
chr4:87515939-87516209	chr4	+	87515973	87516235	True	NM_080685,NM_080684,NM_006264,NM_080683,NM_002753	chr4,chr4,chr4,chr4,chr4	+,+,+,+,-	PTPN13,PTPN13,PTPN13,PTPN13,MAPK10	-556,-556,-556,-556,-141690
chr1:54484749-54485314	chr1	+	54484757	54485049	True	NM_001010978,NM_153035	chr1,chr1	-,+	LDLRAD1,TCEANC2	-954,34224
chr8:143859336-143859714	chr8	+	143859401	143859729	True	NM_177477,NM_177476,NM_177457,NM_177458,NM_003695,NM_016647,NM_023946	chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,-,+,-	LYNX1,LYNX1,LYNX1,LYNX1,LY6D,C8orf55,LYNX1	-657,-964,-13,-8155,8329,-50831,-14
chrX:38079259-38079690	chrX	+	38079338	38079702	True	NM_006307,NM_000531,NM_001170752,NM_001170751,NM_001170750	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	SRPX,OTC,SRPX,SRPX,SRPX	525,132033,525,525,525
chr10:1203898-1204550	chr10	+	1203973	1204183	True	NR_015376,NM_004508	chr10,chr10	+,-	NCRNA00200,IDI1	1524,-108912
chr16:55602814-55604468	chr16	+	55602832	55603567	True	NM_032330,NM_001025194	chr16,chr16	+,-	CAPNS2,CES1	-2301,263563
chr17:45809658-45810560	chr17	+	45809701	45810509	True	NM_145798,NM_013351	chr17,chr17	-,+	OSBPL7,TBX21	88688,100
chr2:74377341-74379096	chr2	+	74377771	74378784	True	NM_212552,NM_006636,NM_001035505	chr2,chr2,chr2	-,+,-	BOLA3,MTHFD2,BOLA3	-2732,46905,-2732
chr19:55271965-55273638	chr19	+	55272248	55273202	True	NM_014218,NM_001127255	chr19,chr19	+,-	KIR2DL1,NLRP7	8062,185723
chr16:1730477-1731680	chr16	+	1730599	1731625	True	NM_144570,NM_014714	chr16,chr16	+,-	HN1L,IFT140	-2372,-68490
chr1:42803325-42804068	chr1	+	42803590	42803808	True	NM_001198852,NM_001198850,NM_001198851,NM_014947,NM_173642	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	FOXJ3,FOXJ3,FOXJ3,FOXJ3,RIMKLA	-2704,-2042,-2954,-2687,42659
chr10:81368465-81368965	chr10	+	81368536	81368933	True	NM_005411,NM_001093770,NM_001098668,NM_001164644,NM_001164645,NM_001164646,NM_001164647	chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,-,+,+,+,+	SFTPA1,SFTPA1,SFTPA2,SFTPA1,SFTPA1,SFTPA1,SFTPA1	1761,1761,-48373,1761,1761,1761,1761
chr21:40554608-40555094	chr21	+	40554679	40554920	True	NM_004627,NM_203433,NM_003720	chr21,chr21,chr21	+,-,-	WRB,PSMG1,PSMG1	197292,571,571
chr5:23508775-23510558	chr5	+	23509215	23509911	True	NM_020227,NM_004061	chr5,chr5	+,-	PRDM9,CDH12	-1542,-655484
chr1:57124626-57124975	chr1	+	57124804	57124992	True	NM_003713,NM_006252	chr1,chr1	-,+	PPAP2B,PRKAA2	-79547,-13871
chrX:18376302-18376862	chrX	+	18376425	18376911	True	NM_006089,NR_033717,NM_003159	chrX,chrX,chrX	-,-,+	SCML2,SCML2,CDKL5	-3581,-3581,66813
chr8:25901420-25901658	chr8	+	25901419	25901657	True	NM_002717,NM_022659	chr8,chr8	+,-	PPP2R2A,EBF2	247349,785
chr11:126226986-126227503	chr11	+	126227013	126227542	True	NM_006278,NR_033839	chr11,chr11	+,-	ST3GAL4,FLJ39051	-968,-1531
chr8:59568388-59569105	chr8	+	59568846	59569025	True	NM_005625,NM_003580,NM_001144772	chr8,chr8,chr8	+,-,-	SDCBP,NSMAF,NSMAF	-103176,3436,2998
chr19:46008805-46009017	chr19	+	46008850	46009018	True	NM_003370,NM_005619,NM_206900,NM_001080401	chr19,chr19,chr19,chr19	+,-,-,+	VASP,RTN2,RTN2,PPM1N	1669,-8539,-8537,-7171
chr3:10052008-10052479	chr3	+	10052101	10052378	True	NM_001008737,NM_033084	chr3,chr3	-,+	LOC401052,FANCD2	452,15734
chr13:46417995-46418520	chr13	+	46417994	46418542	True	NM_198849,NM_152719	chr13,chr13	-,+	SIAH3,SPERT	7354,-141606
chr1:222916793-222917668	chr1	+	222916841	222917490	True	NM_207468,NM_022831	chr1,chr1	+,-	FAM177B,AIDA	-6334,-30977
chr4:24322781-24323195	chr4	+	24322782	24323217	True	NR_030299,NM_003102	chr4,chr4	-,+	MIR573,SOD3	198746,473867
chr6:44214850-44215225	chr6	+	44214864	44215082	True	NM_007355,NM_178148	chr6,chr6	+,-	HSP90AB1,SLC35B2	-66,10251
chr6:29908437-29909753	chr6	+	29909460	29909602	True	NR_001317,NM_002116	chr6,chr6	-,+	HCG4P6,HLA-A	-16032,706
chr6:29908437-29909753	chr6_apd_hap1	+	1149349	1149491	False	NR_001317,NM_002116	chr6_apd_hap1,chr6_apd_hap1	-,+	HCG4P6,HLA-A	-14062,703
chr6:29908437-29909753	chr6_cox_hap2	+	1421214	1421356	False	NR_001317,NM_002116	chr6_cox_hap2,chr6_cox_hap2	-,+	HCG4P6,HLA-A	-14063,703
chr15:61517508-61517810	chr15	+	61517518	61517828	True	NM_134261,NM_207322	chr15,chr15	-,+	RORA,C2CD4A	3724,841347
chr11:22759299-22760725	chr11	+	22759324	22760686	True	NM_005256,NM_148893	chr11,chr11	+,-	GAS2,SVIP	-63056,90747
chr19:11591910-11592711	chr19	+	11592013	11592631	True	NM_032281,NM_001420,NM_002743	chr19,chr19,chr19	-,-,+	ELAVL3,ELAVL3,PRKCSH	-210,-210,-45795
chr9:99177641-99177938	chr9	+	99177679	99177762	True	NM_153695,NM_014282	chr9,chr9	-,+	ZNF367,HABP4	2966,34651
chr20:62527424-62528247	chr20	+	62527431	62528289	True	NM_025219,NR_031735	chr20,chr20	+,-	DNAJC5,MIR1914	-1027,44658
chr1:203762001-203762463	chr1	+	203762184	203762306	True	NM_001174108,NM_014827,NR_027902	chr1,chr1,chr1	+,+,-	ZBED6,ZC3H11A,C1orf157	4344,2444,248136
chr6:111301981-111302856	chr6	+	111302129	111302755	True	NM_032194,NR_002932	chr6,chr6	+,-	RPF2,GSTM2P1	535,66052
chr15:69705910-69706568	chr15	+	69706344	69706600	True	NM_138555,NM_004856,NM_006305	chr15,chr15,chr15	+,+,-	KIF23,KIF23,ANP32A	87,87,-593083
chr11:101375146-101375498	chr11	+	101375147	101375469	True	NR_037485,NM_020802	chr11,chr11	-,+	MIR3920,KIAA1377	15217,410276
chr7:99520223-99521759	chr7	+	99520444	99521360	True	NM_181538,NM_033091,NM_033017,NR_036679	chr7,chr7,chr7,chr7	-,-,-,+	GJC3,TRIM4,TRIM4,AZGP1P1	5933,-3221,-3221,57024
chr7:129011260-129012885	chr7	+	129011286	129012774	True	NM_001130722,NM_001130723,NR_034053	chr7,chr7,chr7	+,+,-	AHCYL2,AHCYL2,TNPO3	2709,-3374,-316059
chr1:230848958-230849452	chr1	+	230848963	230849375	True	NM_000029,NM_006615	chr1,chr1	-,+	AGT,CAPN9	1011,33754
chr11:32914193-32914420	chr11	+	32914224	32914458	True	NM_001008391,NM_001076786	chr11,chr11	-,+	CCDC73,QSER1	-98037,333
chr17:7529366-7530003	chr17	+	7529593	7529959	True	NM_001040,NM_133491,NM_001146279,NM_001146280,NM_001146281,NR_027462	chr17,chr17,chr17,chr17,chr17,chr17	+,-,+,+,+,+	SHBG,SAT2,SHBG,SHBG,SHBG,SHBG	3493,1285,3493,3493,3493,1327
chr2:190629648-190630643	chr2	+	190629964	190630632	True	NM_022353,NM_000534	chr2,chr2	-,+	OSGEPL1,PMS1	-2040,18178
chr7:6867372-6868876	chr7	+	6867972	6868663	True	NM_198097,NM_173565	chr7,chr7	-,+	C7orf28B,RSPH10B	-2046,-74284
chr7:6867372-6868876	chr7	-	5936235	5936286	False	NM_001099697,NM_015622	chr7,chr7	-,+	RSPH10B2,CCZ1	74079,2054
chr19:1360267-1360689	chr19	+	1360284	1360648	True	NR_024247,NM_000156,NM_032853	chr19,chr19,chr19	+,-,+	MUM1,GAMT,MUM1	-4012,40954,-5359
chr17:1529889-1530854	chr17	+	1529921	1530837	True	NM_001163673,NM_152346	chr17,chr17	+,-	WDR81,SLC43A2	88979,1343
chr1:155905100-155905461	chr1	+	155905319	155905385	True	NM_014949,NR_003005,NM_181885	chr1,chr1,chr1	-,-,+	KIAA0907,SCARNA4,RXFP4	-1131,-9442,6094
chr15:91498807-91499745	chr15	+	91498943	91499783	True	NM_033544,NM_001017919,NM_198527	chr15,chr15,chr15	+,+,-	RCCD1,RCCD1,HDDC3	-888,-888,-23169
chr9:111618427-111619258	chr9	+	111618484	111619188	True	NM_006687,NM_006686	chr9,chr9	+,-	ACTL7A,ACTL7B	5414,-209
chr12:8377794-8378458	chr12	+	8377898	8378287	True	NM_018088,NR_026788	chr12,chr12	-,+	FAM90A1,FAM66C	1977,-45144
chr4:3536159-3536647	chr4	+	3536158	3536233	True	NM_002337,NM_173660	chr4,chr4	-,+	LRPAP1,DOK7	-1934,-71177
chr10:124222625-124222882	chr10	+	124222689	124222899	True	NM_001099667,NM_001010912,NM_002775	chr10,chr10,chr10	+,-,+	ARMS2,C10orf120,HTRA1	-8561,236489,-1699
chr9:39815934-39817335	chr9	+	39815945	39816770	True	NR_003528,NM_001085452	chr9,chr9	-,+	LOC653501,FAM75A1	-351419,68204
chr9:39815934-39817335	chr9	-	65578139	65578409	False	NR_024496,NM_015667	chr9,chr9	+,-	LOC442421,FAM75A7	915859,-68529
chr9:39815934-39817335	chr9	+	41431951	41432221	False	NM_015667	chr9	+	FAM75A7	68457
chr9:39815934-39817335	chr9	+	39286695	39287521	False	NM_033655,NM_001085452	chr9,chr9	-,+	CNTNAP3,FAM75A1	837,68177
chr16:71559483-71560348	chr16	+	71559517	71560298	True	NM_001166395,NM_005769,NM_006961	chr16,chr16,chr16	+,+,-	CHST4,CHST4,ZNF19	85,-46,-36263
chr2:10182055-10182329	chr2	+	10182116	10182316	True	NM_001177716,NM_003597,NM_001037160,NM_001177718	chr2,chr2,chr2,chr2	+,+,-,+	KLF11,KLF11,CYS1,KLF11	1639,1365,38272,2055
chr16:89882141-89882448	chr16	+	89882243	89882433	True	NM_032451,NM_000135,NM_001018112	chr16,chr16,chr16	+,-,-	SPIRE2,FANCA,FANCA	12473,682,682
chr5:83019115-83020075	chr5	+	83019165	83020022	True	NM_001884,NM_004385	chr5,chr5	-,+	HAPLN1,VCAN	-2269,-251733
chr1:50791907-50792133	chr1	+	50791935	50792177	True	NM_021952,NM_032110	chr1,chr1	+,-	ELAVL4,DMRTA2	-217392,97014
chr16:83983083-83983373	chr16	+	83983087	83983237	True	NM_013370,NM_001080442,NM_182981,NM_182980	chr16,chr16,chr16,chr16	+,-,+,+	OSGIN1,SLC38A8,OSGIN1,OSGIN1	-466,92575,3589,-466
chr7:121945414-121945713	chr7	+	121945490	121945730	True	NM_001160264,NM_001024613,NR_036484	chr7,chr7,chr7	-,-,+	FEZF1,FEZF1,LOC154860	-925,-925,-1829
chr18:43408860-43409276	chr18	+	43408894	43409322	True	NM_213602,NM_020964	chr18,chr18	+,-	SIGLEC15,EPG5	-3400,138033
chr21:42732742-42733041	chr21	+	42732761	42732977	True	NM_002463,NM_001135099	chr21,chr21	+,-	MX2,TMPRSS2	972,147065
chr7:153750717-153750973	chr7	+	153750839	153751021	True	NM_130797,NM_007349	chr7,chr7	+,-	DPP6,PAXIP1	-1113,1043711
chr7:153750717-153750973	chr7	-	149743824	149744006	False	NM_145230,NR_027040	chr7,chr7	+,-	ATP6V0E2,LOC401431	-173818,-172873
chrX:149864457-149865483	chrX	+	149864571	149865363	True	NM_001184808,NM_003828	chrX,chrX	-,+	CD99L2,MTMR1	201976,-2753
chr8:97174038-97175617	chr8	+	97174302	97175650	True	NM_001001557,NM_014754	chr8,chr8	-,+	GDF6,PTDSS1	-1282,98516
chr3:129614176-129615483	chr3	+	129614208	129615251	True	NM_001128224,NR_037893	chr3,chr3	-,+	TMCC1,LOC100507032	-1789,-1545
chrX:46438554-46439139	chrX	+	46438633	46439010	True	NM_001190417,NM_019886	chrX,chrX	-,+	ZNF674,CHST7	-33741,-5492
chr1:101193701-101194696	chr1	+	101193737	101194523	True	NM_001078,NM_080682,NM_001033025,NM_001199834	chr1,chr1,chr1,chr1	+,+,-,+	VCAM1,VCAM1,EXTL2,VCAM1	-8601,-8601,165954,-8601
chr1:155878168-155878512	chr1	+	155878254	155878349	True	NM_006912,NM_181885	chr1,chr1	-,+	RIT1,RXFP4	2885,33130
chr12:52867258-52867473	chr12	+	52867328	52867522	True	NM_173086,NM_002284	chr12,chr12	-,+	KRT6C,KRT86	97,-171730
chr12:52867258-52867473	chr12	+	52845813	52845863	False	NM_002284,NM_005555	chr12,chr12	+,-	KRT86,KRT6B	-150215,97
chr12:52867258-52867473	chr12	+	52886779	52886973	False	NM_002284,NM_005554	chr12,chr12	+,-	KRT86,KRT6A	-191181,258
chr5:137673384-137673869	chr5	+	137673404	137673830	True	NM_001135647,NM_001790,NM_022809,NM_016605	chr5,chr5,chr5,chr5	+,-,-,+	FAM53C,CDC25C,CDC25C,FAM53C	-231,-5888,-5888,-103
chr15:31395870-31396421	chr15	+	31396066	31396348	True	NM_014967,NM_002420	chr15,chr15	+,-	FAN1,TRPM1	-200041,-2142
chr10:124893035-124893239	chr10	+	124893129	124893223	True	NM_022466,NM_001105574	chr10,chr10	-,+	IKZF5,HMX3	-124818,2343
chr19:1813793-1814147	chr19	+	1813798	1814148	True	NR_031730,NR_034114,NM_138813,NM_001178002	chr19,chr19,chr19,chr19	-,+,-,-	MIR1909,LOC100288123,ATP8B3,ATP8B3	2139,7939,-1528,-1599
chr1:1354965-1355192	chr1	+	1355033	1355163	True	NR_026871,NM_001146685,NM_001145210	chr1,chr1,chr1	-,+,-	LOC441869,TMEM88B,LOC441869	1537,6344,1537
chr14:36292873-36293699	chr14	+	36292873	36293146	True	NM_194301,NM_032352	chr14,chr14	-,+	RALGAPA1,BRMS1L	-14441,2450
chr15:71092017-71093349	chr15	+	71092183	71093111	True	NM_018003,NM_001199017	chr15,chr15	-,+	UACA,LRRC49	-36333,91816
chr2:143695559-143697025	chr2	+	143695559	143696899	True	NM_018557,NM_003937	chr2,chr2	-,+	LRP1B,KYNU	-806289,-60419
chr11:47574826-47576509	chr11	+	47574977	47576134	True	NM_001143984,NM_006560	chr11,chr11	+,-	PTPMT1,CELF1	10847,-185
chr10:124671965-124673641	chr10	+	124672031	124673413	True	NR_037911,NM_001029888	chr10,chr10	-,+	FAM24B,FAM24A	-32874,-1865
chr11:63533882-63534569	chr11	+	63533911	63534531	True	NM_138471,NM_001144936	chr11,chr11	+,-	C11orf84,C11orf95	46391,1632
chr10:73846473-73846835	chr10	+	73846501	73846733	True	NM_001134434,NM_004273,NM_014767	chr10,chr10,chr10	-,+,-	SPOCK2,CHST3,SPOCK2	2107,-122432,2107
chr17:5097801-5098778	chr17	+	5097801	5098672	True	NM_032530,NR_034082	chr17,chr17	-,+	ZNF594,LOC100130950	-2623,-2486
chr9:103349893-103351442	chr9	+	103350202	103351376	True	NM_017746,NM_001018116	chr9,chr9	-,+	TEX10,MURC	-234943,-9928
chr9:34566254-34566492	chr9	+	34566309	34566409	True	NR_024369,NM_001842	chr9,chr9	+,-	LOC415056,CNTFR	1600,23363
chrX:48553341-48553787	chrX	+	48553381	48553825	True	NM_013271,NM_003173	chrX,chrX	-,+	PCSK1N,SUV39H1	140185,1305
chr12:75783225-75784142	chr12	+	75783225	75784166	True	NM_152436,NM_032606	chr12,chr12	+,-	GLIPR1L2,CAPS2	722,-59389
chr5:55003340-55003793	chr5	+	55003465	55003833	True	NM_173514,NM_001166533	chr5,chr5	-,+	SLC38A9,DDX4	4380,30011
chr1:20616494-20616949	chr1	+	20616514	20616898	True	NM_001105572,NM_001039500	chr1,chr1	-,+	PLA2G2C,VWA5B1	-114827,513
chr1:35225324-35227027	chr1	+	35225732	35226766	True	NM_001164824,NM_153212,NM_005268	chr1,chr1,chr1	-,+,+	C1orf212,GJB4,GJB5	97930,-441,-5062
chr19:41360358-41360634	chr19	+	41360398	41360682	True	NM_000762,NM_053046	chr19,chr19	-,+	CYP2A6,EGLN2	-4046,-55115
chr19:41360358-41360634	chr19	+	41392183	41392467	False	NM_030589,NR_001278,NM_000764	chr19,chr19,chr19	-,+,-	CYP2A7,CYP2B7P1,CYP2A7	-3526,37702,-3526
chr2:105761007-105762065	chr2	+	105761093	105761955	True	NM_001142621,NM_007227	chr2,chr2	-,+	TGFBRAP1,GPR45	184244,96244
chr1:25867685-25869460	chr1	+	25867749	25869159	True	NM_015627,NM_138618	chr1,chr1	+,-	LDLRAP1,RHCE	916,-120386
chr11:126173884-126174108	chr11	+	126173975	126174123	True	NM_014026,NM_003139	chr11,chr11	+,-	DCPS,SRPR	-379,-35098
chr2:112813916-112814139	chr2	+	112813955	112814140	True	NM_022662,NM_032824	chr2,chr2	-,+	ANAPC1,TMEM87B	-172214,-1206
chr17:68121995-68123730	chr17	+	68122386	68123749	True	NM_170742,NR_036534	chr17,chr17	+,-	KCNJ16,FLJ36644	-21446,41844
chr5:143544471-143545087	chr5	+	143544488	143545105	True	NM_020768,NM_030799,NM_001024947	chr5,chr5,chr5	+,-,-	KCTD16,YIPF5,YIPF5	5331,5223,5223
chr8:142379135-142380160	chr8	+	142379311	142380079	True	NR_024441,NM_005293	chr8,chr8	+,-	LOC731779,GPR20	-28714,-1946
chr9:139781423-139781649	chr9	+	139781534	139781664	True	NM_153200,NM_021138	chr9,chr9	-,+	EDF1,TRAF2	-20796,-620
chr21:43443304-43443845	chr21	+	43443365	43443753	True	NR_027273,NM_020727	chr21,chr21	+,-	C21orf121,ZNF295	-1303,-12869
chr22:41680632-41681574	chr22	+	41681079	41681548	True	NM_017590,NM_002883	chr22,chr22	+,-	ZC3H7B,RANGAP1	16018,718
chr12:21681293-21681969	chr12	+	21681609	21682011	True	NM_030572,NM_032941	chr12,chr12	+,-	C12orf39,RECQL	-2412,-27006
chr3:148460336-148461169	chr3	+	148460344	148460603	True	NM_003071,NM_032049	chr3,chr3	-,+	HLTF,AGTR1	343795,-12428
chr8:22127835-22128604	chr8	+	22128036	22128276	True	NM_001135721,NM_018068,NR_029714	chr8,chr8,chr8	+,+,-	PIWIL2,PIWIL2,MIR320A	4803,4533,-25480
chr17:36106091-36107009	chr17	+	36106134	36107030	True	NM_001165923,NM_032258,NM_000458	chr17,chr17,chr17	-,+,-	HNF1B,TBC1D3F,HNF1B	-1038,176929,-1038
chr1:47881954-47882156	chr1	+	47881994	47882138	True	NR_026878,NM_012186	chr1,chr1	-,+	MGC12982,FOXE3	18225,-301
chrX:153364292-153364885	chrX	+	153364291	153364933	True	NM_020061,NM_001110792,NM_004992	chrX,chrX,chrX	+,-,-	OPN1LW,MECP2,MECP2	44791,-1103,-1103
chrX:30637769-30638600	chrX	+	30637965	30638380	True	NM_000167,NM_025159	chrX,chrX	+,-	GK,CXorf21	33095,-41932
chr8:38641031-38641810	chr8	+	38641316	38641810	True	NM_006283,NR_003129,NM_001122824	chr8,chr8,chr8	+,-,+	TACC1,RNF5P1,TACC1	2911,-182541,2911
chr5:179123435-179124746	chr5	+	179123630	179124478	True	NM_001746,NM_001164444,NM_001024649	chr5,chr5,chr5	+,-,+	CANX,CBY3,CANX	1451,-15655,1451
chr15:75941916-75942234	chr15	+	75941970	75942282	True	NM_153271,NM_018285	chr15,chr15	+,-	SNX33,IMP3	-673,-9306
chr10:104592571-104592953	chr10	+	104592642	104592996	True	NM_000102,NM_001136200	chr10,chr10	-,+	CYP17A1,C10orf32	4344,20970
chr13:34392444-34392697	chr13	+	34392570	34392740	True	NM_181558,NM_178006,NM_002915	chr13,chr13,chr13	+,-,+	RFC3,STARD13,RFC3	-415,-532669,-415
chr1:91870702-91871746	chr1	+	91870952	91871660	True	NM_001134419,NM_001017975	chr1,chr1	+,-	CDC7,HFM1	94743,-526
chr19:11496879-11497511	chr19	+	11497131	11497220	True	NM_000121,NM_175871,NR_033663	chr19,chr19,chr19	-,+,-	EPOR,C19orf39,EPOR	-2113,-11814,-2113
chrX:149108210-149108619	chrX	+	149108293	149108631	True	NR_027456,NM_001013845	chrX,chrX	+,-	LOC100272228,CXorf40B	-1578,-1577
chr15:99058485-99060170	chr15	+	99058488	99059900	True	NM_182562,NM_000875	chr15,chr15	-,+	FAM169B,IGF1R	-877,132860
chr19:50401615-50402048	chr19	+	50401740	50401848	True	NM_152899,NM_024682	chr19,chr19	-,+	IL4I1,TBC1D17	-1593,-21109
chr8:37755467-37755749	chr8	+	37755538	37755680	True	NM_001002814,NM_025151,NM_032777	chr8,chr8,chr8	-,-,+	RAB11FIP1,RAB11FIP1,GPR124	1385,1385,-101188
chrX:13713345-13714463	chrX	+	13713459	13714224	True	NM_001011658,NM_001195328,NM_004251	chrX,chrX,chrX	-,+,+	TRAPPC2,RAB9A,RAB9A	38589,-6270,-6270
chr2:173288125-173288423	chr2	+	173288130	173288311	True	NR_026995,NM_000210,NM_001079818	chr2,chr2,chr2	-,+,+	LOC91149,ITGA6,ITGA6	312680,4002,4002
chr5:70324845-70325670	chr5	+	70325016	70325138	True	NM_004536,NM_022892,NM_022877	chr5,chr5,chr5	-,-,+	NAIP,NAIP,SMN2	-4075,-4075,-104311
chr5:70324845-70325670	chr5	-	68894394	68894516	False	NR_027439,NM_001042490	chr5,chr5	-,+	LOC100272216,GTF2H2D	34574,-38375
chr5:70324845-70325670	chr5	-	69749538	69749660	False	NR_033417,NR_033968	chr5,chr5	+,-	GTF2H2B,LOC100049076	-38396,101552
chr16:3021939-3022634	chr16	+	3021973	3022471	True	NM_172229,NM_152341,NM_182687,NM_004203,NM_024507	chr16,chr16,chr16,chr16,chr16	+,+,-,-,+	KREMEN2,PAQR4,PKMYT1,PKMYT1,KREMEN2	-7807,-2682,8119,8119,-7807
chr15:77364867-77366196	chr15	+	77364918	77366240	True	NM_003978,NM_005724,NM_198902,NM_001168412	chr15,chr15,chr15,chr15	+,-,-,-	PSTPIP1,TSPAN3,TSPAN3,TSPAN3	-77504,-1348,-1348,-1348
chr7:36756414-36757192	chr7	+	36756623	36757133	True	NM_001637,NM_018685,NM_001177507,NM_001177506	chr7,chr7,chr7,chr7	-,+,-,-	AOAH,ANLN,AOAH,AOAH	7071,-327249,7071,7071
chr12:52798338-52798703	chr12	+	52798343	52798635	True	NM_002284,NM_033033	chr12,chr12	+,-	KRT86,KRT82	-102745,1599
chr13:78512363-78514053	chr13	+	78512769	78513797	True	NM_001201397,NM_144595	chr13,chr13	-,+	EDNRB,SLAIN1	-18866,-197525
chr11:124630484-124631163	chr11	+	124630548	124631188	True	NM_138961,NM_006176,NM_014312	chr11,chr11,chr11	-,+,-	ESAM,NRGN,VSIG2	1085,-20770,-8439
chrX:40124329-40125062	chrX	+	40124367	40124727	True	NM_001123384,NM_005765	chrX,chrX	-,+	BCOR,ATP6AP2	-87785,315488
chr4:24586142-24586470	chr4	+	24586250	24586463	True	NM_001358,NM_003102	chr4,chr4	-,+	DHX15,SOD3	-66,210621
chr11:33183221-33183965	chr11	+	33183227	33183654	True	NR_034027,NM_001033505,NM_001033506,NM_001326	chr11,chr11,chr11,chr11	+,-,-,-	LOC338739,CSTF3,CSTF3,CSTF3	-75,-190,-190,-190
chr15:74045841-74046206	chr15	+	74045952	74046203	True	NM_025240,NM_001039614	chr15,chr15	+,-	CD276,C15orf59	-69381,-2136
chr16:72042168-72042420	chr16	+	72042313	72042431	True	NM_001361,NM_181536	chr16,chr16	+,-	DHODH,PKD1L3	211,-8436
chr6:108880245-108880501	chr6	+	108880287	108880505	True	NM_201559,NM_152827,NM_001455	chr6,chr6,chr6	+,-,+	FOXO3,SNX3,FOXO3	520,-297823,1563
chrX:41777411-41778210	chrX	+	41777426	41778200	True	NM_003688,NM_001126055,NM_001126054,NM_080817	chrX,chrX,chrX,chrX	-,-,-,+	CASK,CASK,CASK,GPR82	4137,4137,4137,-194082
chr18:55394234-55394742	chr18	+	55394412	55394654	True	NM_005603,NM_004852	chr18,chr18	-,+	ATP8B1,ONECUT2	75735,-291546
chr22:21337046-21338143	chr22	+	21337157	21337915	True	NM_001008695,NM_006767	chr22,chr22	-,+	THAP7,LZTR1	18539,-657
chr3:51977543-51978531	chr3	+	51977778	51978566	True	NM_005485,NM_001003931,NM_004704	chr3,chr3,chr3	+,+,-	PARP3,PARP3,RRP9	-1468,-1468,-1856
chr20:23496932-23498070	chr20	+	23497240	23497993	True	NM_080610,NR_001279	chr20,chr20	-,+	CST9L,CSTT	51454,1789
chr21:28513517-28515465	chr21	+	28514179	28515169	True	NR_024357,NM_007038	chr21,chr21	+,-	NCRNA00113,ADAMTS5	579528,-174740
chr16:12053417-12054372	chr16	+	12053523	12054139	True	NM_001130007,NM_001192	chr16,chr16	-,+	GSPT1,TNFRSF17	-43004,4824
chr7:65967692-65967943	chr7	+	65967743	65967929	True	NM_001167961,NR_002933	chr7,chr7	+,-	KCTD7,LOC493754	125938,75619
chr17:62073566-62074281	chr17	+	62073764	62074312	True	NM_001164257,NM_001191029,NM_001191031,NM_001191030,NM_000873	chr17,chr17,chr17,chr17,chr17	+,+,+,+,-	C17orf72,C17orf72,C17orf72,C17orf72,ICAM2	1398,1398,1398,1398,10021
chr3:42623827-42625418	chr3	+	42623978	42625361	True	NM_032970,NM_004206,NM_016305,NM_001201584	chr3,chr3,chr3,chr3	-,-,+,-	SEC22C,SEC22C,SS18L2,SEC22C	-458,-458,6936,-458
chr12:105479046-105479984	chr12	+	105479250	105479732	True	NR_027752,NM_001034173,NM_015275	chr12,chr12,chr12	-,-,+	ALDH1L2,ALDH1L2,KIAA1033	-909,-909,21759
chr8:133884889-133885764	chr8	+	133885106	133885804	True	NM_003235,NM_144649	chr8,chr8	+,-	TG,TMEM71	-5952,-112192
chr8:23021297-23021574	chr8	+	23021385	23021573	True	NM_003840,NM_003841,NR_033928	chr8,chr8,chr8	-,+,+	TNFRSF10D,TNFRSF10C,LOC389641	17,-61109,61160
chr17:34891425-34892455	chr17	+	34891444	34892316	True	NM_001163735,NM_024835,NM_178517,NM_001033580,NM_025109	chr17,chr17,chr17,chr17,chr17	-,+,+,-,-	MYO19,GGNBP2,PIGW,MYO19,MYO19	-139,8420,-92,-139,-139
chr9:124988965-124989343	chr9	+	124988975	124989177	True	NM_199160,NM_001173512,NM_014368	chr9,chr9,chr9	-,+,-	LHX6,MRRF,LHX6	1892,37704,1892
chr2:11272639-11272956	chr2	+	11272730	11272860	True	NM_182500,NM_004850	chr2,chr2	+,-	C2orf50,ROCK2	318,211901
chr22:24100311-24101703	chr22	+	24100724	24101747	True	NM_213720,NM_013378,NM_021916,NM_182520	chr22,chr22,chr22,chr22	-,-,-,+	CHCHD10,VPREB3,ZNF70,C22orf15	8444,-4094,-7445,3460
chr5:137089500-137089764	chr5	+	137089579	137089757	True	NM_006805,NR_002713	chr5,chr5	-,+	HNRNPA0,NPY6R	332,47124
chr4:110691634-110692724	chr4	+	110691938	110692271	True	NM_018983,NM_000204	chr4,chr4	+,-	GAR1,CFI	44394,31121
chr6:7986824-7987159	chr6	+	7986914	7987198	True	NM_030810,NR_027712	chr6,chr6	-,+	TXNDC5,PIP5K1P1	-75867,-632
chr5:114511677-114513527	chr5	+	114511892	114513409	True	NM_001284,NM_001017398,NM_001017397,NM_018700	chr5,chr5,chr5,chr5	+,-,-,-	AP3S1,TRIM36,TRIM36,TRIM36	664209,2884,2884,2884
chr5:43292386-43294157	chr5	+	43292434	43294186	True	NM_153361,NM_001098272	chr5,chr5	+,-	MGC42105,HMGCS1	-100166,19462
chr15:40886841-40887411	chr15	+	40886939	40887412	True	NM_144508,NM_052849,NM_170589	chr15,chr15,chr15	+,-,+	CASC5,C15orf57,CASC5	-543,-29687,-543
chr1:17378186-17378548	chr1	+	17378247	17378332	True	NM_014675,NM_003000	chr1,chr1	+,-	CROCC,SDHB	-129863,2392
chr3:187460889-187461128	chr3	+	187460889	187461079	True	NM_001134738,NM_001130845,NM_001706,NR_034062	chr3,chr3,chr3,chr3	-,-,-,+	BCL6,BCL6,BCL6,LOC100131635	-8194,-6604,2486,-40786
chr6:27101671-27102483	chr6	+	27101677	27102371	True	NM_021064,NM_003495,NM_021058	chr6,chr6,chr6	+,+,-	HIST1H2AG,HIST1H4I,HIST1H2BJ	-911,4716,-1102
chr14:65748301-65749245	chr14	+	65748675	65749293	True	NM_178155,NR_024334	chr14,chr14	+,-	FUT8,LOC645431	128546,130092
chr2:11606764-11608676	chr2	+	11606858	11608582	True	NM_014668,NR_003094,NR_003095,NR_003092,NR_003093,NM_198256	chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-	GREB1,E2F6,E2F6,E2F6,E2F6,E2F6	65659,-561,-561,-561,-561,-561
chr5:94404313-94405493	chr5	+	94404481	94405328	True	NM_152548,NM_001002796	chr5,chr5	+,-	FAM81B,MCTP1	321719,12268
chr4:122079046-122080122	chr4	+	122079083	122080128	True	NM_024873,NR_024365	chr4,chr4	-,+	TNIP3,LOC100192379	5399,605611
chr1:174842940-174843540	chr1	+	174842992	174843468	True	NM_001035230,NM_022100	chr1,chr1	+,-	RABGAP1L,MRPS14	1215,149180
chr16:30798538-30798764	chr16	+	30798546	30798810	True	NM_001080417,NM_014771	chr16,chr16	-,+	ZNF629,RNF40	-23,-24967
chr19:50432561-50432827	chr19	+	50432636	50432818	True	NM_001193357,NM_016553,NM_012068,NM_012346,NM_001193646,NM_153718,NM_153719,NM_172374	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,+,-,+,-,-,-	NUP62,NUP62,ATF5,NUP62,ATF5,NUP62,NUP62,IL4I1	31,220,-728,5,-287,20,20,6
chr7:116830828-116831266	chr7	+	116830934	116831302	True	NR_002332,NR_002331	chr7,chr7	+,-	ST7OT3,ST7OT2	-8250,-45320
chr7:65860294-65861848	chr7	+	65860730	65861790	True	NR_026873,NM_003596	chr7,chr7	-,+	NCRNA00174,TPST1	3655,-190524
chr9:91933791-91934612	chr9	+	91933863	91934454	True	NM_016848,NM_001827,NR_036108,NM_024077	chr9,chr9,chr9,chr9	-,+,+,+	SHC3,CKS2,MIR3153,SECISBP2	-140181,-7801,-6774,-502
chr14:74318087-74318436	chr14	+	74318125	74318404	True	NM_152444,NM_001146154,NM_001146155,NM_001043318	chr14,chr14,chr14,chr14	+,+,+,-	PTGR2,PTGR2,PTGR2,C14orf43	216,129,142,-64229
chr20:46011713-46012418	chr20	+	46011745	46012007	True	NM_183048,NR_024594	chr20,chr20	-,+	ZMYND8,LOC100131496	-26271,-64550
chr15:45722112-45722434	chr15	+	45722422	45722482	True	NM_001482,NM_197955,NR_030599,NM_032413	chr15,chr15,chr15,chr15	-,+,+,+	GATM,C15orf48,MIR147B,C15orf48	-51442,280,2765,280
chr17:72614058-72615392	chr17	+	72614124	72615122	True	NM_152460,NM_181449	chr17,chr17	+,-	C17orf77,CD300E	-33118,4825
chr7:107643084-107643331	chr7	+	107643117	107643327	True	NM_002291,NM_000108	chr7,chr7	-,+	LAMB1,DLD	527,-111582
chr11:64014490-64014869	chr11	+	64014571	64014899	True	NM_057092,NM_138689,NM_001184883,NM_004470,NM_000932,NM_001135208	chr11,chr11,chr11,chr11,chr11,chr11	+,-,+,+,+,+	FKBP2,PPP1R14B,PLCB3,FKBP2,PLCB3,FKBP2	-5034,-158,4095,-6209,4095,-6018
chr18:13612628-13612930	chr18	+	13612667	13612971	True	NM_001003675,NM_001003674,NM_001098801,NM_181483,NM_004338	chr18,chr18,chr18,chr18,chr18	+,+,-,+,+	C18orf1,C18orf1,C18orf19,C18orf1,C18orf1	-1053,-1053,113670,7895,7895
chr6:106529961-106530859	chr6	+	106529977	106530788	True	NM_004849,NM_001198	chr6,chr6	-,+	ATG5,PRDM1	242965,3406
chr4:8175439-8175856	chr4	+	8175464	8175790	True	NM_001130088,NM_018986	chr4,chr4	-,+	ABLIM2,SH3TC1	-14905,25269
chr5:107000504-107001914	chr5	+	107000823	107001935	True	NM_005246,NM_001962	chr5,chr5	+,-	FER,EFNA5	1081587,4719
chr20:49409651-49410522	chr20	+	49409694	49410008	True	NM_198799,NM_015339,NM_017843,NM_001010974	chr20,chr20,chr20,chr20	+,-,+,+	BCAS4,ADNP,BCAS4,BCAS4	1458,137569,1458,1458
chr16:58713971-58714651	chr16	+	58713973	58714551	True	NM_018231,NM_024860	chr16,chr16	-,+	SLC38A7,SETD6	4173,-164641
chr7:44121268-44121503	chr7	+	44121274	44121348	True	NM_013284,NM_001129	chr7,chr7	-,+	POLM,AEBP1	831,22611
chr4:177171138-177172433	chr4	+	177171335	177172350	True	NM_021928,NM_080874	chr4,chr4	+,-	SPCS3,ASB5	68739,18074
chr16:4290798-4291159	chr16	+	4290797	4291171	True	NM_001098814,NM_032575	chr16,chr16	-,+	SRL,GLIS2	960,91053
chr19:37319219-37320762	chr19	+	37319388	37320437	True	NM_003419,NM_206894	chr19,chr19	+,-	ZNF345,ZNF790	20829,8910
chr1:110084679-110085261	chr1	+	110084687	110085230	True	NM_006496,NM_031936,NM_020703	chr1,chr1,chr1	+,+,-	GNAI3,GPR61,AMIGO1	5955,-2244,-32351
chr5:78408337-78408764	chr5	+	78408369	78408681	True	NM_013391,NM_001713	chr5,chr5	-,+	DMGDH,BHMT	-42920,-823
chr11:31833459-31833932	chr11	+	31833617	31833949	True	NM_001127612,NM_000280,NM_001604,NR_033971	chr11,chr11,chr11,chr11	-,-,-,+	PAX6,PAX6,PAX6,DKFZp686K1684	5610,-738,-738,4164
chr11:105955639-105955987	chr11	+	105955638	105955815	True	NM_198439,NM_015423,NM_152433	chr11,chr11,chr11	-,+,-	KBTBD3,AASDHPPT,KBTBD3	-7173,-7404,-7173
chr2:46523547-46523793	chr2	+	46523550	46523754	True	NM_001430,NM_080653	chr2,chr2	+,-	EPAS1,ATP6V1E2	786,223392
chr6:132835335-132836471	chr6	+	132835386	132836483	True	NM_003569,NM_175057	chr6,chr6	-,+	STX7,TAAR9	-1049,22943
chr12:57521266-57521603	chr12	+	57521285	57521402	True	NM_002332,NR_033659	chr12,chr12	+,-	LRP1,STAT6	879,-16089
chr19:18508132-18509401	chr19	+	18508258	18509366	True	NM_145256,NR_036156	chr19,chr19	-,+	LRRC25,MIR3189	-143,-10937
chr14:101347797-101348033	chr14	+	101347850	101348028	True	NR_029965,NR_029966,NR_029699,NR_029696,NR_030173,NR_030617,NR_029889,NM_001134888	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,+,+,+,+,-	MIR431,MIR433,MIR136,MIR127,MIR432,MIR665,MIR337,RTL1	-557,194,3010,1287,2791,-6531,-7071,3206
chr3:50701840-50702249	chr3	+	50702002	50702062	True	NM_145071,NM_004947	chr3,chr3	-,+	CISH,DOCK3	-52740,10609
chr11:4792105-4792676	chr11	+	4792109	4792723	True	NM_001004753,NM_001004752	chr11,chr11	+,-	OR51F2,OR51F1	49892,-962
chr10:15130910-15131237	chr10	+	15130918	15131040	True	NM_183005,NM_001097590,NM_006414,NM_001039844,NM_153244	chr10,chr10,chr10,chr10,chr10	+,+,+,-,-	RPP38,RPP38,RPP38,ACBD7,C10orf111	8141,8141,8141,-143,8328
chr1:84416954-84417544	chr1	+	84417080	84417575	True	NM_207578,NM_024686	chr1,chr1	+,-	PRKACB,TTLL7	126169,47311
chr20:43727369-43727832	chr20	+	43727440	43727746	True	NM_002251,NM_002638	chr20,chr20	-,+	KCNS1,PI3	2059,75793
chr11:35963432-35964068	chr11	+	35963857	35964077	True	NM_174902,NM_001101653	chr11,chr11	+,-	LDLRAD3,COMMD9	1534,346972
chr5:93078623-93078980	chr5	+	93078622	93078982	True	NM_005654,NM_153216	chr5,chr5	+,-	NR2F1,POU5F2	-159634,-1313
chr12:49296338-49297380	chr12	+	49296631	49297350	True	NM_001143781,NM_033124	chr12,chr12	-,+	FKBP11,CCDC65	21364,542
chr9:39887365-39887855	chr9	+	39887367	39887431	True	NR_003528,NM_001040065,NM_001085452	chr9,chr9,chr9	-,+,+	LOC653501,FAM75A2,FAM75A1	-422841,-2443,-2443
chr9:39887365-39887855	chr9	+	39358116	39358180	False	NM_033655,NM_001040065,NM_001085452	chr9,chr9,chr9	-,+,+	CNTNAP3,FAM75A2,FAM75A1	-69816,-2468,-2468
chr13:51662989-51664920	chr13	+	51663077	51664955	True	NR_003923,NM_145019	chr13,chr13	-,+	GUCY1B2,FAM124A	-22784,131551
chr2:27546217-27547454	chr2	+	27546255	27547350	True	NM_187841,NM_002437	chr2,chr2	+,-	TRIM54,MPV17	-41016,-286
chrX:107021038-107022301	chrX	+	107021042	107022333	True	NM_198057,NM_012216	chrX,chrX	-,+	TSC22D3,MID2	-2025,46750
chr6:47248167-47249162	chr6	+	47248251	47248873	True	NM_012120,NM_014452	chr6,chr6	+,-	CD2AP,TNFRSF21	196651,28863
chr9:35535406-35535694	chr9	+	35535448	35535534	True	NM_001099951,NM_001135999	chr9,chr9	-,+	FAM166B,RUSC2	28420,3094
chr17:1956825-1957028	chr17	+	1956833	1957015	True	NM_006497,NM_001098202,NR_029674,NR_029625	chr17,chr17,chr17,chr17	+,+,-,-	HIC1,HIC1,MIR132,MIR212	1377,2588,-3531,-3159
chr18:271164-271886	chr18	+	271310	271710	True	NM_005131,NM_005151	chr18,chr18	-,+	THOC1,USP14	-3251,-112878
chr17:66242363-66243062	chr17	+	66242538	66243065	True	NM_001033571,NM_001033570,NM_001033572,NM_001033574,NM_001174166,NM_016627,NM_001033569	chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,-,+,+	AMZ2,AMZ2,AMZ2,AMZ2,SLC16A6,AMZ2,AMZ2	1079,1079,1079,1079,44397,1079,1079
chr15:43597327-43599308	chr15	+	43597761	43599327	True	NM_001012969,NM_052955	chr15,chr15	+,-	ADAL,TGM7	23544,-3308
chr10:129536266-129537008	chr10	+	129536272	129537050	True	NM_207426,NM_152311	chr10,chr10	+,-	FOXI2,CLRN3	-785,154211
chr1:201083620-201083837	chr1	+	201083643	201083813	True	NM_000069,NM_001164586	chr1,chr1	-,+	CACNA1S,IGFN1	-1949,76139
chr10:6780786-6781381	chr10	+	6780821	6781281	True	NR_036503,NM_006257	chr10,chr10	+,-	LOC439949,PRKCQ	-158502,-158583
chr1:13714386-13715670	chr1	+	13714486	13715681	True	NM_001099850,NM_001099851	chr1,chr1	-,+	PRAMEF18,PRAMEF17	-16081,406
chr1:13714386-13715670	chr1	+	13493653	13494847	False	NM_001045480,NM_001099850	chr1,chr1	+,-	PRAMEF16,PRAMEF18	406,-16084
chr16:4785162-4786429	chr16	+	4785230	4786286	True	NM_133450,NM_139170	chr16,chr16	-,+	ANKS3,C16orf71	-1067,-992
chr3:172470211-172471388	chr3	+	172470403	172471408	True	NM_018098,NM_020792	chr3,chr3	+,-	ECT2,NCEH1	889,-41395
chr17:77028738-77029678	chr17	+	77028761	77029417	True	NM_198594,NM_138793,NM_030968,NM_198593	chr17,chr17,chr17,chr17	+,-,+,+	C1QTNF1,CANT1,C1QTNF1,C1QTNF1	-8561,-22862,-8561,1054
chr12:16055199-16055550	chr12	+	16055251	16055566	True	NM_004447,NM_015954	chr12,chr12	-,+	EPS8,DERA	-112741,8619
chr2:242296198-242298145	chr2	+	242296433	242298161	True	NM_005336,NM_014808	chr2,chr2	-,+	HDLBP,FARP2	-41179,-820
chr20:61641193-61641767	chr20	+	61641440	61641667	True	NM_080606,NR_033370	chr20,chr20	-,+	BHLHE23,LOC63930	-3053,-756
chr22:40301912-40303874	chr22	+	40302297	40303842	True	NM_004810,NM_152512	chr22,chr22	+,-	GRAP2,ENTHD1	-5270,-12503
chr17:57299123-57299658	chr17	+	57299182	57299524	True	NM_182569,NM_182620,NM_001165994,NM_001165993	chr17,chr17,chr17,chr17	+,-,+,+	GDPD1,SKA2,GDPD1,GDPD1	-1410,-66382,-1410,-1410
chr15:85358593-85359517	chr15	+	85358733	85359465	True	NM_014300,NM_020778	chr15,chr15	-,+	SEC11A,ALPK3	-99059,445
chr19:33556343-33556653	chr19	+	33556344	33556422	True	NM_033103,NM_018025	chr19,chr19	-,+	RHPN2,GPATCH1	-520,15363
chr8:127593723-127594143	chr2	-	143657293	143657824	True	NM_018557,NM_003937	chr2,chr2	-,+	LRP1B,KYNU	-768023,-22630
chr7:141695954-141697838	chr7	+	141696238	141697845	True	NM_004668,NM_176817	chr7,chr7	+,-	MGAM,TAS2R38	-613,-22665
chr13:31732608-31733425	chr13	+	31732913	31733445	True	NM_194318,NM_006644	chr13,chr13	+,-	B3GALTL,HSPH1	40666,2730
chr7:99274837-99275118	chr7	+	99274965	99275165	True	NR_033810,NR_033808,NR_033809,NR_033812,NR_033811,NR_033807,NM_145115,NM_000777,NM_001190484	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,-,+,-,-	CYP3A5,CYP3A5,CYP3A5,CYP3A5,CYP3A5,CYP3A5,ZNF498,CYP3A5,CYP3A5	2506,2506,2506,2506,2506,2506,-60460,2506,2506
chr19:592554-592785	chr19	+	592750	592812	True	NM_001194,NM_005035	chr19,chr19	+,-	HCN2,POLRMT	-2908,40806
chr1:173443021-173444404	chr1	+	173443136	173443456	True	NR_037845,NM_004905	chr1,chr1	-,+	LOC100506023,PRDX6	2888,3029
chr12:57119331-57119931	chr12	+	57119334	57119980	True	NM_001113202,NM_001113203,NM_005594,NM_001113201,NM_003725	chr12,chr12,chr12,chr12,chr12	-,-,-,-,+	NACA,NACA,NACA,NACA,HSD17B6	-8,-8,-268,-268,37127
chr11:3505741-3506919	chr11	+	3506475	3506555	True	NM_007152,NR_024248	chr11,chr11	-,+	ZNF195,LOC650368	-106027,-104335
chr8:135605332-135605920	chr8	+	135605397	135605968	True	NR_002438,NM_001029939	chr8,chr8	+,-	ZFAT-AS1,ZFAT	4345,102883
chr7:43768407-43768876	chr7	+	43768622	43768812	True	NM_000712,NM_018224	chr7,chr7	+,-	BLVRA,C7orf44	29459,321
chr1:9190061-9190635	chr1	+	9190210	9190511	True	NM_004285,NM_024980	chr1,chr1	+,-	H6PD,GPR157	104351,-981
chr8:27186833-27187127	chr8	+	27186839	27187091	True	NM_173176,NM_173175,NM_004103,NM_171982	chr8,chr8,chr8,chr8	+,+,+,-	PTK2B,PTK2B,PTK2B,TRIM35	-3894,-3809,-6971,-18005
chr3:100953488-100955425	chr3	+	100953631	100955232	True	NM_016247,NR_036433	chr3,chr3	-,+	IMPG2,FAM172B	84252,282483
chr4:91162512-91163283	chr4	+	91162553	91163186	True	NM_001146055,NM_207491	chr4,chr4	-,+	SNCA,FAM190A	-403106,-6433
chr17:38804542-38804764	chr17	+	38804546	38804776	True	NM_001195387,NM_003079	chr17,chr17	+,-	TMEM99,SMARCE1	170567,-443
chr2:37384347-37385055	chr2	+	37384357	37384990	True	NM_001135651,NR_037879,NM_001135652,NM_002759	chr2,chr2,chr2,chr2	-,+,-,-	EIF2AK2,LOC100505876,EIF2AK2,EIF2AK2	-167,38644,-9392,-167
chr19:11706672-11707059	chr19	+	11706926	11707101	True	NM_001111036,NM_145295	chr19,chr19	-,+	ACP5,ZNF627	-17125,1133
chr19:1065961-1066400	chr19	+	1066037	1066432	True	NM_002695,NM_012292	chr19,chr19	-,+	POLR2E,HMHA1	29009,741
chr14:54422476-54422763	chr14	+	54422577	54422707	True	NM_130850,NM_001202,NM_130851,NM_001130851	chr14,chr14,chr14,chr14	-,-,-,+	BMP4,BMP4,BMP4,CDKN3	897,897,-1307,440965
chr4:102770945-102771733	chr4	+	102770992	102771407	True	NM_001083907,NM_001135148	chr4,chr4	+,-	BANK1,SLC39A8	-36067,474121
chr15:65894500-65895097	chr15	+	65894902	65895007	True	NM_030800,NM_001136043,NM_004727	chr15,chr15,chr15	-,-,+	C15orf44,C15orf44,SLC24A1	8453,8515,19262
chr12:11093007-11094853	chr12	+	11093209	11094886	True	NM_001110213,NM_023922	chr12,chr12	+,-	PRH2,TAS2R14	-11425,-1403
chr11:17759571-17760343	chr11	+	17759685	17760335	True	NM_004976,NM_153676,NM_001112741	chr11,chr11,chr11	+,-,+	KCNC1,USH1C,KCNC1	-2241,-193722,-2241
chr14:32417734-32419645	chr14	+	32417804	32419682	True	NR_027263,NM_001030055	chr14,chr14	-,+	C14orf128,ARHGAP5	126273,126812
chr8:101965645-101967382	chr8	+	101965769	101967118	True	NM_145690,NM_001135702,NM_001135701,NM_001135700,NM_001135699,NM_003406,NR_033962	chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,-,-,+	YWHAZ,YWHAZ,YWHAZ,YWHAZ,YWHAZ,YWHAZ,FLJ42969	-1412,-2970,-2209,-2209,-548,-146,97163
chr1:155212677-155213738	chr1	+	155212679	155213786	True	NM_000157,NM_020897,NM_001171812,NM_001171811,NM_198883,NM_001005742,NM_001005741	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,+,-,-,+,-,-	GBA,HCN3,GBA,GBA,MTX1,GBA,GBA	-1610,33587,-1613,917,-34240,917,917
chr17:6875424-6876196	chr17	+	6875628	6875697	True	NM_000697,NR_029712	chr17,chr17	+,-	ALOX12,MIR195	23686,45374
chr1:181451152-181451421	chr1	+	181451168	181451434	True	NM_005819,NM_000721	chr1,chr1	-,+	STX6,CACNA1E	-459122,1281
chr16:3014487-3014717	chr16	+	3014524	3014752	True	NM_172229,NM_152341,NM_004203,NM_024507	chr16,chr16,chr16,chr16	+,+,-,+	KREMEN2,PAQR4,PKMYT1,KREMEN2	-358,4589,15838,-358
chr19:6277206-6277547	chr19	+	6277219	6277519	True	NM_006012,NM_005934	chr19,chr19	+,-	CLPP,MLLT1	83943,2498
chr19:39615689-39615900	chr19	+	39615868	39615946	True	NM_001014832,NM_001014831,NM_001014835,NM_001014834,NM_005884,NM_001080468	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,-	PAK4,PAK4,PAK4,PAK4,PAK4,SYCN	473,473,473,473,473,79010
chr11:20045103-20045852	chr11	+	20045190	20045840	True	NM_001111019,NM_001029865	chr11,chr11	+,-	NAV2,DBX1	-612,136080
chr6:44373729-44374572	chr6	+	44374111	44374372	True	NM_001253,NM_020745	chr6,chr6	+,-	CDC5L,AARS2	-18868,-93048
chr2:220493397-220493844	chr2	+	220493404	220493804	True	NM_001173408,NM_005070,NM_201574	chr2,chr2,chr2	-,+,+	OBSL1,SLC4A3,SLC4A3	-57136,-1163,-1163
chr6:14957259-14957742	chr6	+	14957486	14957750	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	288776,705597
chr13:25846235-25847956	chr13	+	25846351	25848006	True	NM_001008564,NM_004685	chr13,chr13	+,-	NUPL1,MTMR6	27659,13755
chr15:68870391-68870834	chr15	+	68870504	68870818	True	NM_006091,NM_001004439	chr15,chr15	+,-	CORO2B,ITGA11	754,-146012
chr2:187366729-187368194	chr2	+	187366982	187368054	True	NM_182521,NM_018471	chr2,chr2	-,+	ZSWIM2,ZC3H15	345893,-16148
chr6:28190526-28191271	chr6	+	28190628	28191282	True	NR_002936,NM_001199479,NM_001199480,NM_006299	chr6,chr6,chr6,chr6	-,+,+,+	LOC222699,ZNF193,ZNF193,ZNF193	-3921,1746,1746,1746
chr17:3569664-3570171	chr17	+	3569673	3570213	True	NM_001204698,NM_001014764,NM_014604,NM_031298	chr17,chr17,chr17,chr17	-,+,-,+	TAX1BP3,TMEM93,TAX1BP3,TMEM93	1810,1876,1810,1876
chr8:33424892-33425274	chr8	+	33424909	33425029	True	NM_024787,NM_032509	chr8,chr8	-,+	RNF122,MAK16	-266,-82275
chr1:20401159-20402455	chr1	+	20401220	20402318	True	NM_000929,NM_012400	chr1,chr1	+,-	PLA2G5,PLA2G2D	-4570,43740
chr10:18946701-18947652	chr10	+	18946926	18947514	True	NM_178815,NM_182543	chr10,chr10	+,-	ARL5B,NSUN6	798,-6376
chr2:86319870-86320757	chr2	+	86320023	86320689	True	NM_015425,NM_017952	chr2,chr2	-,+	POLR1A,PTCD3	12646,12615
chrX:40032715-40033418	chrX	+	40032806	40033444	True	NM_001123384,NM_005765,NM_001123383	chrX,chrX,chrX	-,+,-	BCOR,ATP6AP2,BCOR	3188,406771,3188
chrX:152866979-152867198	chrX	+	152866985	152867137	True	NM_001130997,NM_152274,NM_001395	chrX,chrX,chrX	-,-,+	FAM58A,FAM58A,DUSP9	-2353,-2353,40759
chr3:53879735-53879998	chr3	+	53879746	53879976	True	NM_018397,NM_018725	chr3,chr3	-,+	CHDH,IL17RB	494,600
chr12:127648046-127648816	chr12	+	127648055	127648849	True	NR_033970,NR_033987	chr12,chr12	-,+	LOC440117,FLJ37505	-288819,717312
chrX:102470723-102471748	chrX	+	102471069	102471784	True	NM_001080425,NM_001127688,NM_001006684	chrX,chrX,chrX	+,+,-	BEX4,BEX4,TCEAL8	-1100,-1100,38388
chr3:38352405-38354252	chr3	+	38352409	38354241	True	NM_004803,NR_028389	chr3,chr3	+,-	SLC22A14,LOC100128640	-5018,142120
chr13:46178505-46178915	chr13	+	46178619	46178806	True	NM_182542,NM_152719	chr13,chr13	-,+	FAM194B,SPERT	11122,97639
chr9:139757841-139758143	chr9	+	139757843	139758113	True	NM_003792,NM_153200,NM_206920	chr9,chr9,chr9	-,-,+	EDF1,EDF1,MAMDC4	2675,2675,-11075
chr7:20889249-20891221	chr7	+	20889438	20891141	True	NM_198956,NR_026673	chr7,chr7	-,+	SP8,RPL23P8	-62930,-22579
chr3:24519253-24520204	chr3	+	24519350	24520242	True	NM_001145425,NM_001128176	chr3,chr3	+,-	NR1D2,THRB	-531802,16078
chr9:36272787-36273925	chr9	+	36273055	36273975	True	NM_001128227,NM_001190388,NM_007096	chr9,chr9,chr9	-,-,+	GNE,GNE,CLTA	3136,3136,-82256
chr16:67450726-67451203	chr16	+	67450726	67451250	True	NM_013304,NM_000196	chr16,chr16	-,+	ZDHHC1,HSD11B2	-387,13785
chr1:78511882-78512113	chr1	+	78511901	78512145	True	NM_003902,NM_017655	chr1,chr1	-,+	FUBP1,GIPC2	-67124,-363
chr12:71263582-71263823	chr12	+	71263585	71263861	True	NM_002849,NM_014505	chr12,chr12	-,+	PTPRR,KCNMB4	50773,-503582
chr22:22649593-22650274	chr22	+	22649715	22650207	True	NM_080764,NR_027293	chr22,chr22	-,+	ZNF280B,LOC96610	213348,2255
chr12:123464439-123464796	chr12	+	123464481	123464691	True	NM_203444,NM_024623,NM_018694,NM_001002251,NM_001002252,NM_016638	chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,+,+,+	ABCB9,OGFOD2,ARL6IP4,ARL6IP4,ARL6IP4,ARL6IP4	-4729,-5178,188,188,188,188
chr6:82714628-82715053	chr6	+	82714679	82715077	True	NM_006670,NM_015525	chr6,chr6	+,-	TPBG,IBTK	357845,242421
chrX:13707754-13708656	chrX	+	13707783	13708668	True	NM_001011658,NM_001195328,NM_004251	chrX,chrX,chrX	-,+,+	TRAPPC2,RAB9A,RAB9A	44137,-595,-595
chr2:84683878-84684120	chr2	+	84684094	84684154	True	NM_003849,NM_001370	chr2,chr2	-,+	SUCLG1,DNAH6	2482,59424
chr15:34640507-34640709	chr15	+	34640528	34640610	True	NM_018648,NM_175741	chr15,chr15	-,+	NOP10,C15orf55	-5166,-2513
chr10:100028466-100028927	chr10	+	100028509	100028811	True	NM_014472,NM_032211	chr10,chr10	+,-	C10orf28,LOXL4	-134179,-502
chr5:66130329-66130853	chr5	+	66130347	66130885	True	NM_005582,NM_015183	chr5,chr5	-,+	CD180,MAST4	361782,-5801
chr19:11529369-11529572	chr19	+	11529373	11529561	True	NM_001001329,NM_001161616,NM_001035223	chr19,chr19,chr19	+,-,-	PRKCSH,RGL3,RGL3	16707,507,507
chr17:66243915-66244285	chr17	+	66243990	66244282	True	NM_001033571,NM_001033570,NM_001033572,NM_001033574,NM_001174166,NM_016627,NM_001033569	chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,-,+,+	AMZ2,AMZ2,AMZ2,AMZ2,SLC16A6,AMZ2,AMZ2	-78,-78,-78,-78,43173,-78,-78
chr3:135912326-135913271	chr3	+	135912452	135913271	True	NM_000532,NM_001145417,NM_018133	chr3,chr3,chr3	+,-,-	PCCB,MSL2,MSL2	55895,90,1468
chr9:139923405-139923850	chr9	+	139923533	139923605	True	NM_004479,NM_001606,NM_212533,NM_207511	chr9,chr9,chr9,chr9	-,-,-,+	FUT7,ABCA2,ABCA2,C9orf139	3737,-793,-159,-1668
chr12:27680972-27682549	chr12	+	27681285	27682173	True	NM_003622,NM_001146221,NM_001198916,NM_001198915,NM_177444	chr12,chr12,chr12,chr12,chr12	+,-,+,+,+	PPFIBP1,LOC100287284,PPFIBP1,PPFIBP1,PPFIBP1	-4293,242087,-4293,-4293,-4293
chr7:72437979-72438796	chr7	+	72438402	72438481	True	NR_033323,NR_003602	chr7,chr7	-,+	NSUN5P2,LOC541473	-13100,1710
chr7:72437979-72438796	chr7	-	75026418	75026497	False	NM_198853,NM_198924,NR_003614	chr7,chr7,chr7	+,+,-	TRIM74,TRIM73,PMS2L2	-1567,-1567,-38203
chr9:104161120-104161365	chr9	+	104161176	104161382	True	NM_019051,NM_197977,NM_003452	chr9,chr9,chr9	-,+,+	MRPL50,ZNF189,ZNF189	-257,-64,-64
chr5:34916222-34917667	chr5	+	34916234	34917114	True	NM_002853,NM_018321,NR_026591	chr5,chr5,chr5	-,+,-	RAD1,BRIX1,RAD1	-454,-465,-503
chr16:87800075-87800284	chr16	+	87800074	87800166	True	NM_020655,NM_001184856,NM_017566,NM_001184854	chr16,chr16,chr16,chr16	+,-,-,-	JPH3,KLHDC4,KLHDC4,KLHDC4	-163626,-476,-476,-476
chr17:27277655-27277873	chr17	+	27277655	27277747	True	NM_020889,NM_016518,NM_001033561	chr17,chr17,chr17	-,+,-	PHF12,PIPOX,PHF12	811,92170,811
chr4:87928847-87929103	chr4	+	87928847	87929072	True	NM_144645,NM_005935	chr4,chr4	-,+	C4orf36,AFF1	-115272,-745
chr7:27089384-27090857	chr7	+	27089529	27090580	True	NM_005522,NR_002795	chr7,chr7	-,+	HOXA1,HOXA11-AS1	45105,134446
chr1:157155441-157156105	chr1	+	157155561	157156095	True	NM_001145312,NR_001560	chr1,chr1	-,+	ETV3,CYCSP52	-47178,-57458
chr8:18244622-18244833	chr8	+	18244683	18244875	True	NM_000015,NM_004315	chr8,chr8	+,-	NAT2,ASAH1	3879,-302176
chrX:106871802-106872959	chrX	+	106871823	106872973	True	NM_002764,NM_001015881,NM_001204402	chrX,chrX,chrX	+,-,+	PRPS1,TSC22D3,PRPS1	-220,86788,-220
chrX:69484357-69485164	chrX	+	69484498	69485180	True	NM_004312,NM_002565	chrX,chrX	+,-	ARR3,P2RY4	3004,-4844
chr7:41738333-41739183	chr7	+	41738459	41739012	True	NM_002192,NR_027119,NR_027118	chr7,chr7,chr7	-,+,+	INHBA,LOC285954,LOC285954	3744,-4964,-4996
chr2:242446683-242446933	chr2	+	242446753	242446949	True	NM_032515,NM_006374	chr2,chr2	+,-	BOK,STK25	51242,1135
chr3:196044744-196045024	chr3	+	196044889	196044953	True	NM_152672,NM_152773	chr3,chr3	+,-	OSTalpha,TCTEX1D2	-101557,262
chr7:6749636-6750340	chr7	+	6749659	6750377	True	NR_002217,NM_006956,NM_016265	chr7,chr7,chr7	+,-,-	PMS2CL,ZNF12,ZNF12	24558,-3093,-3093
chr12:6831207-6831594	chr12	+	6831492	6831597	True	NM_001164095,NM_001164094,NM_153685,NM_001164093,NM_016319	chr12,chr12,chr12,chr12,chr12	+,+,-,+,+	COPS7A,COPS7A,C12orf53,COPS7A,COPS7A	1647,1552,-21680,1851,1582
chr11:10831438-10831748	chr11	+	10831460	10831762	True	NR_034137,NM_001172705,NR_004403,NM_001042559,NM_001418	chr11,chr11,chr11,chr11,chr11	+,-,-,-,-	LOC729013,EIF4G2,SNORD97,EIF4G2,EIF4G2	48001,-1917,-8305,-878,-878
chr4:44678642-44680207	chr4	+	44678846	44680144	True	NM_021927,NM_182592	chr4,chr4	+,-	GUF1,YIPF7	288,-25188
chr19:12663485-12663915	chr19	+	12663485	12663785	True	NM_153358,NM_144976	chr19,chr19	+,-	ZNF791,ZNF564	57946,-1129
chr2:162582161-162583138	chr2	+	162582252	162583134	True	NM_001935,NM_022058	chr2,chr2	-,+	DPP4,SLC4A10	347974,-101458
chr4:185569591-185569859	chr4	+	185569658	185569872	True	NM_152683,NM_032991,NM_004346	chr4,chr4,chr4	+,-,-	CCDC111,CASP3,CASP3	894,807,807
chr17:60885807-60886450	chr17	+	60886015	60886327	True	NM_001100875,NM_152598,NR_036146	chr17,chr17,chr17	-,-,+	MARCH10,MARCH10,MIR548W	-2004,-310,-87208
chr20:4993940-4994279	chr20	+	4994146	4994306	True	NR_028370,NM_203327	chr20,chr20	+,-	PCNA-AS1,SLC23A2	105925,-3207
chr9:79012518-79013618	chr9	+	79012626	79013138	True	NR_026890,NM_018339	chr9,chr9	+,-	RPSAP9,RFK	376,-3182
chrX:52736343-52737269	chrX	+	52736430	52736832	True	NM_003147,NM_175698,NM_001164417	chrX,chrX,chrX	-,-,-	SSX2,SSX2,SSX2B	-181,-181,-181
chrX:52736343-52737269	chrX	-	52779724	52780126	False	NM_003147,NM_175698,NM_001164417	chrX,chrX,chrX	+,+,+	SSX2,SSX2,SSX2B	181,181,181
chr6:27528683-27529001	chr6	+	27528683	27528803	True	NM_001076781,NM_007149	chr6,chr6	+,-	ZNF391,ZNF184	-172215,-87786
chr17:6914868-6915741	chr17	+	6915197	6915785	True	NR_030178,NM_174893,NM_001004333,NM_001142798,NM_001142799,NR_037715,NR_037716,NR_037717,NR_029712	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,+,+,+,+,+,+,-	MIR497,C17orf49,RNASEK,C17orf49,C17orf49,RNASEK,RNASEK,RNASEK-C17ORF49,MIR195	5606,2270,38,2270,2270,38,38,38,5285
chr11:14512935-14514411	chr11	+	14513314	14514391	True	NM_001144062,NM_016451,NM_001144061,NM_000922	chr11,chr11,chr11,chr11	-,-,-,+	COPB1,COPB1,COPB1,PDE3B	7081,7070,7107,150877
chr4:159593092-159593330	chr4	+	159593091	159593221	True	NM_001008393,NM_004453	chr4,chr4	-,+	C4orf46,ETFDH	31,55
chr4:140194602-140196532	chr4	+	140195087	140196538	True	NM_057175,NM_032623	chr4,chr4	+,-	NAA15,C4orf49	26137,5005
chr20:57423810-57425722	chr20	+	57423906	57425492	True	NM_016592,NM_001077490,NM_080425,NR_002785	chr20,chr20,chr20,chr20	+,+,+,-	GNAS,GNAS,GNAS,GNAS-AS1	-9164,2543,2543,516
chr4:140206175-140207842	chr4	+	140206391	140207615	True	NM_057175,NM_032623	chr4,chr4	+,-	NAA15,C4orf49	15060,-4899
chr5:1007472-1007902	chr5	+	1007556	1007827	True	NM_033120,NM_006598	chr5,chr5	+,-	NKD2,SLC12A7	1340,104395
chr17:31206383-31207285	chr17	+	31206395	31207091	True	NM_001033504,NM_015194	chr17,chr17	+,-	TMEM98,MYO1D	47836,-2493
chr19:18681775-18682495	chr19	+	18681792	18682419	True	NM_012181,NM_001033930,NM_003333	chr19,chr19,chr19	-,+,+	FKBP8,UBA52,UBA52	-27409,194,194
chr7:121773693-121774672	chr7	+	121773758	121774322	True	NM_005763,NR_036484	chr7,chr7	-,+	AASS,LOC154860	10072,169389
chr9:32382380-32384049	chr9	+	32382800	32384078	True	NM_014314,NM_002197	chr9,chr9	-,+	DDX58,ACO1	142294,522
chr11:118478487-118478726	chr11	+	118478492	118478736	True	NM_001144758,NM_001144759,NM_015157,NM_020153	chr11,chr11,chr11,chr11	+,+,+,-	PHLDB1,PHLDB1,PHLDB1,IFT46	-237,-237,-1330,-41701
chr3:194120829-194121171	chr3	+	194120877	194121179	True	NR_033929,NM_004488	chr3,chr3	+,-	FLJ34208,GP5	86689,-882
chr1:197689812-197690290	chr1	+	197689811	197690199	True	NM_001195215,NM_001024594	chr1,chr1	-,+	DENND1B,C1orf53	54474,181482
chr19:825678-825992	chr19	+	825723	825843	True	NM_001700,NM_024888	chr19,chr19	+,-	AZU1,LPPR3	1987,-3771
chr11:113345140-113345363	chr11	+	113345180	113345384	True	NM_016574,NM_178510,NM_000795	chr11,chr11,chr11	-,+,-	DRD2,ANKK1,DRD2	667,-86718,667
chr19:11265979-11266246	chr19	+	11266098	11266158	True	NM_001195803,NM_182513	chr19,chr19	+,-	LDLR,SPC24	-66111,376
chr14:75077920-75078226	chr14	+	75077943	75078019	True	NM_015962,NM_000428	chr14,chr14	+,-	FCF1,LTBP2	101830,1065
chr2:23616973-23617401	chr2	+	23616990	23617384	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	532601,-8750
chr17:42273752-42274068	chr17	+	42273783	42273872	True	NM_024107,NM_001098833,NM_178542,NM_001076674,NM_020218,NM_177441	chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,+,-,+	TMUB2,ATXN7L3,C17orf65,TMUB2,ATXN7L3,TMUB2	-9486,1710,-9701,-9486,1710,-9266
chr5:146833400-146833642	chr5	+	146833453	146833605	True	NM_001387,NM_001112724	chr5,chr5	-,+	DPYSL3,STK32A	-193,-218925
chr11:85567799-85568215	chr11	+	85567956	85568246	True	NM_032943,NM_173556	chr11,chr11	-,+	SYTL2,CCDC83	-45778,-1876
chr2:36823939-36824292	chr2	+	36824025	36824283	True	NM_001177972,NM_005102,NM_001042548	chr2,chr2,chr2	+,-,-	VIT,FEZ2,FEZ2	99549,1099,1099
chr8:74129192-74130970	chr8	+	74129363	74130720	True	NM_172037,NR_034020	chr8,chr8	+,-	RDH10,LOC100130301	76544,41081
chr19:41936034-41936496	chr19	+	41936347	41936425	True	NM_001167869,NM_001167868,NM_198540,NM_018035,NM_001167870,NM_001167871,NM_001167867,NR_030765,NM_001130514	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,-,+	ATP5SL,ATP5SL,B3GNT8,ATP5SL,ATP5SL,ATP5SL,ATP5SL,ATP5SL,C19orf69	9468,9106,-1712,9468,9468,9468,9106,9468,12637
chr1:151163023-151164380	chr1	+	151163237	151163756	True	NM_001135637,NM_001135636,NM_003557,NM_005997,NM_001135638	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	PIP5K1A,PIP5K1A,PIP5K1A,VPS72,PIP5K1A	7264,7264,7264,-597,7264
chr11:66311322-66312753	chr11	+	66311432	66312445	True	NM_001104,NM_207340	chr11,chr11	+,-	ACTN3,ZDHHC24	1945,1288
chr6:133120170-133120635	chr6	+	133120225	133120553	True	NM_052831,NM_001016	chr6,chr6	-,+	C6orf192,RPS12	-478,15154
chr6:41300223-41302132	chr6	+	41300561	41302147	True	NM_001199510,NM_004828,NM_001199509,NM_018643	chr6,chr6,chr6,chr6	+,+,+,-	NCR2,NCR2,NCR2,TREM1	1380,1380,1380,-46104
chr1:224519490-224520161	chr1	+	224519644	224520031	True	NM_002533,NM_206840,NM_014184	chr1,chr1,chr1	-,-,+	NVL,NVL,CNIH4	-1772,-1772,24563
chr19:39340582-39341314	chr19	+	39340784	39341268	True	NM_001001716,NM_001533,NM_001005335	chr19,chr19,chr19	+,-,-	NFKBIB,HNRNPL,HNRNPL	49346,-167,1761
chr1:228333028-228333747	chr1	+	228333087	228333767	True	NM_000858,NM_020435,NM_181465,NM_001159390,NM_001159391	chr1,chr1,chr1,chr1,chr1	+,+,-,+,+	GUK1,GJC2,MRPL55,GUK1,GUK1	-5209,3785,-36074,-5209,-734
chr15:37392816-37393116	chr15	+	37393018	37393140	True	NM_170674,NM_170675,NM_170676,NM_170677,NM_172315,NM_172316,NM_002399,NM_032499	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,-,-,-,-,-,+	MEIS2,MEIS2,MEIS2,MEIS2,MEIS2,MEIS2,MEIS2,C15orf41	-314,-314,-314,-314,-2515,-1421,410,-460266
chr3:138725341-138726017	chr3	+	138725344	138725688	True	NM_001040061,NM_001134659	chr3,chr3	+,-	C3orf72,PRR23A	-59319,-234
chr3:127318249-127319565	chr3	+	127318356	127319496	True	NM_001142646,NM_004526,NM_001136053	chr3,chr3,chr3	-,+,-	TPRA1,MCM2,TPRA1	-8788,-1154,-8860
chr1:160149365-160150595	chr1	+	160149368	160150307	True	NM_052868,NM_001231,NM_001001734	chr1,chr1,chr1	-,+,+	IGSF8,CASQ1,ATP1A4	-80960,9977,-2218
chrX:21673957-21674266	chrX	+	21673956	21674264	True	NM_015884,NM_153270	chrX,chrX	+,-	MBTPS2,KLHL34	183391,2234
chr6:150064585-150065742	chr6	+	150064766	150065109	True	NM_198887,NM_005389	chr6,chr6	-,+	NUP43,PCMT1	2634,5721
chr11:3238500-3238755	chr11	+	3238519	3238791	True	NR_027138,NM_001164377	chr11,chr11	+,-	C11orf36,MRGPRG	770,1302
chr15:50553997-50555679	chr15	+	50554206	50555625	True	NM_002112,NM_003645	chr15,chr15	-,+	HDC,SLC27A2	2587,-79872
chr13:70611607-70612813	chr13	+	70612156	70612569	True	NR_002717,NM_020866	chr13,chr13	+,-	ATXN8OS,KLHL1	68775,70113
chr16:21226042-21227996	chr16	+	21226337	21227979	True	NM_145865,NM_003460	chr16,chr16	+,-	ANKS4B,ZP2	17036,-3469
chr6:27115043-27115517	chr6	+	27115269	27115538	True	NM_080596,NM_003495,NM_080593,NR_036096	chr6,chr6,chr6,chr6	+,+,-,+	HIST1H2AH,HIST1H4I,HIST1H2BK,MIR3143	-412,-8232,-632,-35
chr14:24604883-24605119	chr14	+	24604933	24605029	True	NM_016049,NM_006263,NM_176783,NM_203402	chr14,chr14,chr14,chr14	-,+,+,+	FAM158A,PSME1,PSME1,FITM1	5818,348,348,-4309
chr5:14662419-14663712	chr5	+	14662487	14663499	True	NM_138348,NR_037899	chr5,chr5	+,-	FAM105B,LOC100128508	1283,113692
chr1:27699737-27699988	chr1	+	27699811	27700013	True	NM_003665,NM_207397,NM_005281,NM_004672,NM_173452	chr1,chr1,chr1,chr1,chr1	-,-,+,-,-	FCN3,CD164L2,GPR3,MAP3K6,FCN3	1352,9842,19138,-6474,1352
chr17:72711115-72711547	chr17	+	72711284	72711550	True	NM_001163989,NM_139018	chr17,chr17	+,-	RAB37,CD300LF	21408,-2176
chr13:50511619-50513233	chr13	+	50511711	50513186	True	NR_023351,NR_003268,NM_020456,NM_001127482	chr13,chr13,chr13,chr13	-,+,-,-	C13orf1,CTAGE10P,C13orf1,C13orf1	-1086,-47219,-1086,-1086
chr19:6769141-6769417	chr19	+	6769175	6769447	True	NM_005490,NM_005428	chr19,chr19	-,+	SH2D3A,VAV1	-1652,3274
chrX:10586300-10587354	chrX	+	10586374	10587390	True	NM_000381,NM_033289,NM_001830	chrX,chrX,chrX	-,-,+	MID1,MID1,CLCN4	1334,1334,-461447
chr8:145839828-145841108	chr8	+	145840132	145841149	True	NM_014665,NM_025251	chr8,chr8	+,-	LRRC14,ARHGAP39	-96820,-1244
chr20:31458951-31460161	chr20	+	31459497	31460143	True	NM_012325,NM_053041	chr20,chr20	+,-	MAPRE1,COMMD7	-51849,-127683
chrX:134233043-134233517	chrX	+	134233168	134233487	True	NR_024493,NM_001078171	chrX,chrX	-,+	NCRNA00087,FAM127A	-435,-66886
chr13:107207559-107208975	chr13	+	107207773	107208825	True	NM_018011,NR_034119	chr13,chr13	-,+	ARGLU1,LOC728192	11739,-178920
chr1:206681563-206682323	chr1	+	206681572	206682372	True	NM_182664,NM_001201478,NM_182663	chr1,chr1,chr1	+,-,+	RASSF5,EIF2D,RASSF5	-744,103582,-744
chr5:140717475-140718620	chr5	+	140717687	140718669	True	NM_031993,NM_005642,NM_032009,NM_032011,NM_018915,NM_018916,NM_018912	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,-,+,+,+,+,+	PCDHGA1,TAF7,PCDHGA2,PCDHGA3,PCDHGA2,PCDHGA3,PCDHGA1	-7493,-17336,42,4931,42,4931,-7493
chr3:192959774-192961199	chr3	+	192960098	192961228	True	NM_020386,NR_026877,NM_198505	chr3,chr3,chr3	+,+,-	HRASLS,MGC2889,ATP13A5	-1231,-581,135336
chr2:148775765-148776874	chr2	+	148775876	148776883	True	NM_001190881,NM_001190882,NM_001190879,NM_018328,NM_181741,NM_181742,NM_002552	chr2,chr2,chr2,chr2,chr2,chr2,chr2	-,-,-,+,-,-,-	ORC4,ORC4,ORC4,MBD5,ORC4,ORC4,ORC4	1498,1474,1484,1696,1631,2341,1497
chr1:47780158-47780562	chr1	+	47780162	47780388	True	NM_001136140,NM_001048166,NM_003035	chr1,chr1,chr1	+,-,-	CMPK1,STIL,STIL	19080,-343,-343
chr19:36237684-36238631	chr19	+	36237831	36238375	True	NM_144987,NM_001040425,NM_024660,NM_144617,NM_172341,NM_019104	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,+,+	U2AF1L4,U2AF1L4,IGFLR1,HSPB6,PSENEN,LIN37	-1495,-1495,-4480,9606,-1388,1136
chr12:48166037-48166432	chr12	+	48166059	48166191	True	NM_001098531,NM_017842	chr12,chr12	-,+	RAPGEF3,SLC48A1	-13170,775
chr6:45391618-45391875	chr6	+	45391652	45391717	True	NM_004348,NM_181356	chr6,chr6	+,-	RUNX2,SUPT3H	-1789,-45982
chr4:9535435-9535977	chr4	+	9535452	9535988	True	NR_031688,NM_001040448	chr4,chr4	-,+	MIR548I2,DEFB131	21999,-89243
chr2:67624423-67624737	chr2	+	67624498	67624662	True	NM_019002,NM_001190263	chr2,chr2	+,-	ETAA1,C1D	-107,665547
chr5:94612923-94614328	chr5	+	94613027	94614301	True	NM_152548,NM_024717	chr5,chr5	+,-	FAM81B,MCTP1	112746,6036
chr16:68268542-68268749	chr16	+	68268623	68268789	True	NM_024939,NM_012320	chr16,chr16	-,+	ESRP2,PLA2G15	1397,10457
chr11:113932182-113932756	chr11	+	113932196	113932733	True	NM_020886,NM_001018011,NM_006006	chr11,chr11,chr11	-,+,+	USP28,ZBTB16,ZBTB16	-185940,-959,-1816
chr9:137030513-137030987	chr9	+	137030519	137030973	True	NR_023344,NM_052821	chr9,chr9	-,+	RNU6ATAC,WDR5	-833,-25656
chr20:47835475-47835748	chr20	+	47835665	47835779	True	NM_017454,NM_017895	chr20,chr20	-,+	STAU1,DDX27	-30761,52
chr3:51430893-51431270	chr3	+	51430925	51431185	True	NM_001171904,NM_006010,NM_013286	chr3,chr3,chr3	-,+,+	VPRBP,MANF,RBM15B	102883,-8286,-2279
chr3:58520877-58522058	chr3	+	58520898	58522072	True	NM_003500,NM_153331	chr3,chr3	-,+	ACOX2,KCTD6	907,-36857
chr11:94196933-94198652	chr11	+	94197333	94198284	True	NM_017704,NM_005590	chr11,chr11	+,-	ANKRD49,MRE11A	28868,28813
chr8:71520262-71520470	chr8	+	71520327	71520399	True	NM_001011720,NM_014294	chr8,chr8	+,-	XKR9,TRAM1	61200,345
chr15:41853374-41853762	chr15	+	41853441	41853787	True	NM_015540,NM_006293	chr15,chr15	-,+	RPAP1,TYRO3	-16977,-2272
chr10:97666936-97667266	chr10	+	97666949	97667107	True	NM_001130446,NR_036113	chr10,chr10	+,-	C10orf131,MIR3157	614,157099
chr6:25666844-25667935	chr6	+	25667418	25667965	True	NM_170745,NM_006998	chr6,chr6	-,+	HIST1H2AA,SCGN	58876,-15041
chr20:34133172-34134711	chr20	+	34133384	34134497	True	NM_015966,NM_198398,NM_001145350	chr20,chr20,chr20	+,+,-	ERGIC3,ERGIC3,C20orf173	-3658,-3658,-15903
chr12:69773283-69774529	chr12	+	69773577	69774443	True	NM_006530,NR_031692	chr12,chr12	+,-	YEATS4,MIR1279	-20103,-106579
chr12:13252668-13252875	chr12	+	13252706	13252898	True	NM_001080555,NM_001080554,NM_031289,NM_020853,NM_153823	chr12,chr12,chr12,chr12,chr12	-,-,-,+,-	GSG1,GSG1,GSG1,KIAA1467,GSG1	3771,3771,-3997,-55443,-3997
chr12:510391-510993	chr12	+	510462	510864	True	NM_001130146,NM_001042603,NM_032358	chr12,chr12,chr12	+,-,+	CCDC77,KDM5A,CCDC77	-46,-11842,-46
chr4:100483250-100483773	chr4	+	100483422	100483675	True	NM_001134666,NM_001134665,NM_152292,NM_000253	chr4,chr4,chr4,chr4	-,-,-,+	RG9MTD2,RG9MTD2,RG9MTD2,MTTP	1575,1575,1211,1564
chr8:22963096-22963365	chr8	+	22963102	22963368	True	NM_003841,NR_027140	chr8,chr8	+,-	TNFRSF10C,TNFRSF10B	-2826,-36402
chr9:91795521-91797281	chr9	+	91795562	91797156	True	NM_016848,NM_001827	chr9,chr9	-,+	SHC3,CKS2	-1880,128956
chr20:23806272-23806695	chr20	+	23806298	23806738	True	NM_001322,NR_001279	chr20,chr20	-,+	CST2,CSTT	624,-306566
chr7:76029134-76029873	chr7	+	76029344	76029838	True	NM_080744,NM_007155	chr7,chr7	-,+	SRCRB4D,ZP3	9224,-2554
chr3:118729251-118729980	chr3	+	118729335	118729993	True	NM_152539,NM_001015887	chr3,chr3	+,-	C3orf30,IGSF11	135003,23733
chr4:83929660-83931523	chr4	+	83930083	83931538	True	NM_194282,NM_001115008,NM_001115007,NM_016129	chr4,chr4,chr4,chr4	-,-,-,+	LIN54,LIN54,LIN54,COPS4	494,494,2552,24700
chr12:31948802-31950609	chr12	+	31949236	31950576	True	NM_001135863,NM_001013699	chr12,chr12	+,-	METTL20,H3F3C	-136678,-4061
chr2:240959588-240960183	chr2	+	240959637	240960221	True	NR_037808,NM_001005853,NM_004544	chr2,chr2,chr2	+,-,-	LOC150935,OR6B2,NDUFA10	-275134,9675,4648
chr19:48497004-48497562	chr19	+	48497080	48497365	True	NM_022142,NM_001128326	chr19,chr19	+,-	ELSPBP1,BSPH1	542,-1653
chr10:5144692-5145240	chr10	+	5144939	5145114	True	NM_003739,NR_027916	chr10,chr10	+,-	AKR1C3,AKR1CL1	-8422,82097
chr10:11570889-11572023	chr10	+	11570943	11571755	True	NM_001080491,NM_024693	chr10,chr10	-,+	USP6NL,ECHDC3	2572,212600
chr2:97524757-97525697	chr2	+	97524879	97525697	True	NM_016466,NM_199078	chr2,chr2	-,+	ANKRD39,CNNM3	-1123,-42939
chr20:38589816-38590701	chr20	+	38589850	38590558	True	NR_033905,NM_005461	chr20,chr20	+,-	DHX35,MAFB	-998920,727368
chr1:207000276-207000755	chr1	+	207000287	207000397	True	NM_013371,NM_000572	chr1,chr1	+,-	IL19,IL10	1824,-54448
chr17:79356874-79357342	chr17	+	79356978	79357288	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	16251,-52504
chr8:134113241-134114795	chr8	+	134113358	134114544	True	NM_001045556,NM_001045557,NM_001204869	chr8,chr8,chr8	-,-,+	SLA,SLA,WISP1	816,816,88737
chr21:29391872-29393362	chr21	+	29391888	29392908	True	NR_027246,NM_013240	chr21,chr21	+,-	C21orf94,N6AMT1	-6257,864835
chr21:29391872-29393362	chr21	+	14683959	14684029	False	NR_026916,NR_036164	chr21,chr21	+,-	ANKRD30BP2,MIR3156-3	-273523,94802
chr8:22090016-22090277	chr8	+	22090032	22090106	True	NM_001722,NM_001099335,NM_014759	chr8,chr8,chr8	+,-,-	POLR3D,PHYHIP,PHYHIP	12512,-181,-181
chr19:43100643-43100860	chr19	+	43100688	43100906	True	NM_001816,NR_036584	chr19,chr19	-,+	CEACAM8,LOC100289650	-1606,225108
chr6:42184053-42184268	chr6	+	42184156	42184274	True	NM_000409,NM_018141	chr6,chr6	+,-	GUCA1A,MRPS10	-61063,1409
chr11:63448819-63449030	chr11	+	63448945	63449043	True	NM_201428,NM_201429,NM_006054,NM_015459,NM_201430	chr11,chr11,chr11,chr11,chr11	+,+,+,-,+	RTN3,RTN3,RTN3,ATL3,RTN3	-74,-74,-74,-9862,-74
chr14:99736126-99736359	chr14	+	99736132	99736204	True	NM_022898,NM_001099402,NM_138576	chr14,chr14,chr14	-,+,-	BCL11B,CCNK,BCL11B	1668,211534,1668
chr13:92050901-92051122	chr13	+	92050980	92051150	True	NR_027039,NM_004466	chr13,chr13	-,+	LOC144776,GPC5	-472129,-96
chr17:3338933-3339555	chr17	+	3338983	3339264	True	NM_012373,NM_003554	chr17,chr17	+,-	OR3A3,OR1E2	-15172,-1848
chr2:217473632-217474021	chr2	+	217473840	217474016	True	NM_000597,NM_000599	chr2,chr2	+,-	IGFBP2,IGFBP5	24110,86306
chr12:53615012-53615368	chr12	+	53615063	53615136	True	NM_001170790,NM_001042728	chr12,chr12	+,-	MFSD5,RARG	30233,-913
chr6:76309634-76310234	chr6	+	76309803	76310059	True	NM_015687,NM_015571,NM_001100409	chr6,chr6,chr6	-,+,+	FILIP1,SENP6,SENP6	-106307,1562,1562
chr7:91888358-91889719	chr7	+	91888585	91889717	True	NM_194456,NM_019004	chr7,chr7	-,+	KRIT1,ANKIB1	-13171,-13088
chr16:2035896-2037069	chr16	+	2035933	2036905	True	NM_144603,NM_172168,NM_004209,NM_172167,NM_005262	chr16,chr16,chr16,chr16,chr16	-,-,+,-,+	NOXO1,NOXO1,SYNGR3,NOXO1,GFER	-4493,-4749,3040,-4749,-1834
chr16:57702915-57703306	chr16	+	57702996	57703262	True	NM_001130099,NM_170776	chr16,chr16	-,+	KIFC3,GPR97	128717,-890
chr12:104456010-104456922	chr12	+	104456190	104456811	True	NM_031302,NM_013320	chr12,chr12	-,+	GLT8D2,HCFC2	-12275,1424
chr7:148396908-148398340	chr7	+	148397034	148398176	True	NM_003592,NM_001203249	chr7,chr7	+,-	CUL1,EZH2	-1152,182477
chr1:17531435-17532876	chr1	+	17531558	17532600	True	NM_007365,NM_013358	chr1,chr1	-,+	PADI2,PADI1	-85610,12
chrX:100549010-100549642	chrX	+	100549206	100549664	True	NM_024885,NM_001939,NM_001168474	chrX,chrX,chrX	-,+,-	TAF7L,DRP2,TAF7L	-1147,-74324,-2881
chr4:57537984-57539961	chr4	+	57538012	57539861	True	NM_032495,NM_001145460,NM_139212,NM_206919	chr4,chr4,chr4,chr4	-,-,-,+	HOPX,HOPX,HOPX,ARL9	8063,8063,8063,-166696
chr5:219332-219906	chr5	+	219392	219894	True	NM_004168,NM_145265	chr5,chr5	+,-	SDHA,CCDC127	-1087,-1095
chrX:130187302-130188905	chrX	+	130187421	130188927	True	NM_144967,NM_182314	chrX,chrX	+,-	ARHGAP36,ENOX2	3288,-150213
chr8:98654593-98655364	chr8	+	98654735	98655155	True	NM_033512,NM_178812	chr8,chr8	-,+	TSPYL5,MTDH	-364559,1251
chr3:125579850-125580473	chr11	-	3508943	3509002	False	NM_007152,NR_024248	chr11,chr11	-,+	ZNF195,LOC650368	-108495,-106812
chr3:125579850-125580473	chr3	+	125579969	125580279	True	NR_024250,NR_031687	chr3,chr3	+,-	LOC100125556,MIR548I1	55164,-70574
chr3:125579850-125580473	chr3	-	75527378	75527437	False	NR_031714,NR_024241	chr3,chr3	+,-	MIR1324,FAM86DP	152476,-43112
chr3:125579850-125580473	chr3	-	129874062	129874121	False	NR_027898,NR_024252	chr3,chr3	+,-	COL6A4P2,LOC729375	57541,-43786
chr21:43098120-43099663	chr21	+	43098186	43099694	True	NR_027272,NR_024367	chr21,chr21	-,+	C21orf129,NCRNA00111	36291,113
chr19:7578387-7580207	chr19	+	7578599	7579975	True	NM_018083,NM_080662,NM_020533	chr19,chr19,chr19	+,-,+	ZNF358,PEX11G,MCOLN1	1028,-24694,7520
chr2:133015524-133015725	chr2	+	133015674	133015736	True	NR_031608,NM_001508,NR_027020	chr2,chr2,chr2	-,+,-	MIR663B,GPR39,ANKRD30BL	-1021,158410,-132
chr17:39969753-39970068	chr17	+	39969752	39970062	True	NM_006455,NM_021939	chr17,chr17	-,+	LEPREL4,FKBP10	-1301,-841
chr11:61559339-61559906	chr11	+	61559339	61559873	True	NR_030342,NM_014206,NM_004111	chr11,chr11,chr11	-,-,+	MIR611,C11orf10,FEN1	210,262,276
chr1:32759357-32760206	chr1	+	32759703	32760114	True	NM_023009,NM_004964	chr1,chr1	-,+	MARCKSL1,HDAC1	41779,-2046
chr19:41770981-41771388	chr19	+	41770987	41771345	True	NM_144732,NM_007040,NM_000660	chr19,chr19,chr19	+,+,-	HNRNPUL1,HNRNPUL1,TGFB1	-2647,-918,88536
chr1:204134878-204135621	chr1	+	204135062	204135620	True	NM_005686,NM_000537	chr1,chr1	+,-	SOX13,REN	-92867,-105
chr14:23290391-23290617	chr14	+	23290398	23290654	True	NM_181307,NM_181304,NM_003982,NM_181306,NM_181305,NM_180982,NM_001126106,NM_001126105,NM_178336	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,+,-,+,+,+,-,-,+	MRPL52,MRPL52,SLC7A7,MRPL52,MRPL52,MRPL52,SLC7A7,SLC7A7,MRPL52	8437,8437,-5326,8437,8437,8437,-1384,-5326,8437
chr20:32308811-32309321	chr20	+	32309011	32309153	True	NM_032819,NM_007238,NM_183397	chr20,chr20,chr20	+,-,-	ZNF341,PXMP4,PXMP4	10654,-875,-875
chr16:30441957-30442687	chr16	+	30442027	30442737	True	NM_024096,NM_016643	chr16,chr16	-,+	DCTPP1,ZNF771	-654,-23343
chr6:25836349-25837347	chr6	+	25836810	25837364	True	NM_005074,NM_005495	chr6,chr6	-,+	SLC17A1,SLC17A4	-4523,-81934
chr12:30909417-30910641	chr12	+	30909675	30910539	True	NM_023925,NM_001002259,NM_032156,NM_001080509	chr12,chr12,chr12,chr12	-,-,-,+	CAPRIN2,CAPRIN2,CAPRIN2,TSPAN11	-2227,-2227,-2227,169298
chr9:37542619-37543846	chr9	+	37542633	37543855	True	NM_022490,NM_012166	chr9,chr9	+,-	POLR1E,FBXO10	-56740,32445
chr10:75172804-75173383	chr10	+	75172804	75173408	True	NM_173348,NM_001156,NM_004034	chr10,chr10,chr10	+,-,-	FAM149B1,ANXA7,ANXA7	-244978,483,483
chr19:47617857-47618172	chr19	+	47617949	47618085	True	NM_015168,NM_001145713	chr19,chr19	-,+	ZC3H4,SAE1	-940,15994
chr1:99131235-99131959	chr1	+	99131611	99131979	True	NM_001010861,NR_033716,NM_152238,NM_015976	chr1,chr1,chr1,chr1	-,+,+,+	LPPR5,SNX7,SNX7,SNX7	338520,-4437,-4437,-4437
chr1:113164424-113165666	chr1	+	113164788	113165493	True	NM_006135,NM_138728,NM_138729,NM_017744,NM_138727	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	CAPZA1,ST7L,ST7L,ST7L,ST7L	-2767,-2748,-2748,-2748,-2748
chr5:88416966-88417822	chr5	+	88417002	88417635	True	NM_001193347,NM_006467	chr5,chr5	-,+	MEF2C,POLR3G	-217080,1353045
chr17:6546896-6547852	chr17	+	6547164	6547894	True	NM_014804,NM_001105520,NM_032731,NM_016060	chr17,chr17,chr17,chr17	-,+,+,-	KIAA0753,C17orf100,TXNDC17,MED31	-2917,7164,-2993,7110
chr17:74462857-74463679	chr17	+	74462862	74463576	True	NM_022066,NM_001088	chr17,chr17	-,+	UBE2O,AANAT	-13574,53
chr12:96164218-96164507	chr12	+	96164221	96164555	True	NM_003095,NM_021229	chr12,chr12	+,-	SNRPF,NTN4	88153,20031
chr12:10314300-10316251	chr12	+	10314657	10316089	True	NM_153022,NM_001172632,NM_001172633,NM_002543	chr12,chr12,chr12,chr12	+,-,-,-	C12orf59,OLR1,OLR1,OLR1	15467,8751,8751,8751
chr14:53155965-53157178	chr14	+	53156534	53157037	True	NM_002806,NM_014584	chr14,chr14	+,-	PSMC6,ERO1L	16858,5439
chr16:24266918-24267129	chr16	+	24266963	24267154	True	NM_006539,NM_033266	chr16,chr16	+,-	CACNG3,ERN2	-140,-542142
chr9:93570650-93572335	chr9	+	93570754	93572030	True	NM_001174168,NM_001135052,NM_017594,NM_003177	chr9,chr9,chr9,chr9	+,+,-,+	SYK,SYK,DIRAS2,SYK	-6599,-6794,-165646,-6794
chr10:121626060-121626958	chr10	+	121626482	121626974	True	NM_024834,NM_007190	chr10,chr10	-,+	MCMBP,SEC23IP	5470,25110
chrX:2879722-2880012	chrX	+	2879721	2879901	True	NM_000047,NM_001011719	chrX,chrX	-,+	ARSE,ARSH	2645,44752
chr6:147830547-147831342	chr6	+	147830734	147831283	True	NM_001030060,NR_034115	chr6,chr6	+,-	SAMD5,LOC729178	-957,-304984
chr1:46805286-46805528	chr1	+	46805350	46805464	True	NM_006369,NM_199044	chr1,chr1	-,+	LRRC41,NSUN4	-36312,925
chr7:142553087-142554571	chr7	+	142553348	142554599	True	NM_004445,NM_018646	chr7,chr7	+,-	EPHB6,TRPV6	-607,28928
chr3:172243477-172244120	chr3	+	172243569	172243784	True	NM_018098,NR_033994,NM_003810,NM_001190942,NM_001190943	chr3,chr3,chr3,chr3,chr3	+,-,-,-,-	ECT2,TNFSF10,TNFSF10,TNFSF10,TNFSF10	228513,-2272,-2272,-2272,-2304
chr17:58203112-58203435	chr17	+	58203398	58203487	True	NM_000717,NR_027408	chr17,chr17	+,-	CA4,LOC653653	23814,-23118
chr17:58203112-58203435	chr17	-	60354386	60354436	False	NR_027486,NM_001144933	chr17,chr17	-,+	TBC1D3P2,EFCAB3	-1370,93142
chr17:58203112-58203435	chr17	-	58097780	58097869	False	NM_003161,NR_002924	chr17,chr17	+,-	RPS6KB1,DHX40P1	-127391,-1444
chr4:86744923-86745822	chr4	+	86745381	86745773	True	NM_001042669,NM_138981	chr4,chr4	+,-	ARHGAP24,MAPK10	-45591,283095
chr11:34369133-34370543	chr11	+	34369132	34370580	True	NM_001752,NM_145804	chr11,chr11	+,-	CAT,ABTB2	89891,9025
chr12:4428326-4429076	chr12	+	4428350	4428977	True	NM_020638,NM_020375	chr12,chr12	-,+	FGF23,C12orf5	59968,1381
chr12:7243443-7243912	chr12	+	7243500	7243910	True	NR_026947,NM_001733	chr12,chr12	+,-	LOC283314,C1R	16993,1183
chr14:23388404-23388820	chr14	+	23388415	23388817	True	NM_006109,NM_173527,NM_001077351,NM_001077352,NM_018107,NM_001039619	chr14,chr14,chr14,chr14,chr14,chr14	-,+,-,-,-,-	PRMT5,REM2,RBM23,RBM23,RBM23,PRMT5	9894,-36034,-19,-19,-19,9894
chr11:94502213-94502506	chr11	+	94502311	94502506	True	NM_016403,NM_130847	chr11,chr11	-,+	CWC15,AMOTL1	204320,-854
chrX:109662427-109663927	chrX	+	109662576	109663854	True	NM_020769,NM_001171689	chrX,chrX	+,-	RGAG1,AMMECR1	-342,19663
chr17:53045044-53045337	chr17	+	53045058	53045362	True	NM_001162862,NM_001162861,NM_178509,NR_027941,NR_027942,NM_004375	chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,-,-,-	COX11,COX11,STXBP4,COX11,COX11,COX11	752,752,763,752,752,752
chr14:81421688-81421931	chr14	+	81421781	81421857	True	NM_001018036,NM_001142626,NM_152446,NM_000369	chr14,chr14,chr14,chr14	+,+,-,+	TSHR,TSHR,C14orf145,TSHR	11,11,-15897,11
chr18:59854636-59854865	chr18	+	59854718	59854882	True	NM_176787,NM_020854,NM_012327	chr18,chr18,chr18	-,+,-	PIGN,KIAA1468,PIGN	-429,-245,-429
chr15:51638982-51640452	chr15	+	51639368	51640415	True	NM_000103,NM_181789,NM_031226	chr15,chr15,chr15	-,+,-	CYP19A1,GLDN,CYP19A1	-8573,-5718,-8573
chr3:56717802-56718449	chr3	+	56717861	56718495	True	NR_024460,NM_001112736	chr3,chr3	+,-	CCDC66,C3orf63	-126729,-726
chr2:112983513-112984088	chr2	+	112983680	112983875	True	NM_032494,NM_198581	chr2,chr2	-,+	ZC3H8,ZC3H6	28846,49302
chr12:122461994-122462208	chr12	+	122462087	122462201	True	NM_001171993,NM_020993,NM_001024808	chr12,chr12,chr12	-,+,+	HPD,BCL7A,BCL7A	-135570,-2277,-2277
chr16:30389068-30389274	chr16	+	30389147	30389323	True	NM_013292,NM_052838,NM_015527	chr16,chr16,chr16	+,-,-	MYLPF,SEPT1,TBC1D10B	-3075,4898,-7625
chr19:57634926-57636035	chr19	+	57634944	57635808	True	NM_020903,NM_052882	chr19,chr19	+,-	USP29,ZIM3	-3486,20812
chr4:25557839-25559243	chr4	+	25558232	25559068	True	NM_015187,NM_001177998	chr4,chr4	-,+	SEL1L3,SLC34A2	305600,98366
chr10:135239400-135239621	chr10	+	135239481	135239669	True	NR_002934,NM_001012508	chr10,chr10	+,-	LOC619207,SPRN	27762,-1360
chr10:135239400-135239621	chr10	+	135384276	135384464	False	NM_001143764,NR_033789,NM_001143763,NM_130784,NM_000773	chr10,chr10,chr10,chr10,chr10	-,-,-,-,+	SYCE1,SPRNP1,SYCE1,SYCE1,CYP2E1	-5138,-814,-5138,-1400,-43460
chr1:12291899-12293153	chr1	+	12292358	12292887	True	NM_138346,NM_018156,NM_015378	chr1,chr1,chr1	-,+,+	KIAA2013,VPS13D,VPS13D	-305873,-2296,-2296
chr22:36016303-36016547	chr22	+	36016491	36016591	True	NM_203377,NM_030641,NM_203378,NM_005368	chr22,chr22,chr22,chr22	-,+,-,-	MB,APOL6,MB,MB	2860,27832,-2936,-3107
chr7:106683885-106684928	chr7	+	106684003	106684733	True	NM_002736,NM_175884	chr7,chr7	+,-	PRKAR2B,FLJ36031	444,-382369
chr11:69517764-69517972	chr11	+	69517820	69517897	True	NM_005117,NM_053056	chr11,chr11	-,+	FGF19,CCND1	1260,-61998
chr12:22698476-22698959	chr12	+	22698687	22699011	True	NM_014802,NM_001039481	chr12,chr12	-,+	KIAA0528,ETNK1	-1235,79064
chr17:7762232-7762499	chr17	+	7762246	7762534	True	NM_032356,NM_144607,NM_203411	chr17,chr17,chr17	-,+,+	LSMD1,CYB5D1,TMEM88	-1074,-1233,-3913
chr19:6736725-6736981	chr19	+	6736822	6737030	True	NM_004240,NM_001080452	chr19,chr19	+,-	TRIP10,GPR108	2676,653
chr3:48371810-48372503	chr3	+	48372026	48372546	True	NM_001080525,NM_001159927	chr3,chr3	-,+	SPINK8,FBXW12	-2195,41162
chr13:37574404-37574861	chr13	+	37574584	37574764	True	NM_001142364,NM_181503,NM_013338	chr13,chr13,chr13	-,+,-	ALG5,EXOSC8,ALG5	-1080,5,-1080
chr20:42221070-42222870	chr20	+	42221292	42222617	True	NM_016004,NM_001008901	chr20,chr20	+,-	IFT52,GTSF1L	-1771,133084
chr5:170771379-170772183	chr5	+	170772037	170772223	True	NM_021025,NR_037474	chr5,chr5	+,-	TLX3,MIR3912	-35801,41591
chr9:86150902-86151646	chr9	+	86150911	86151668	True	NM_174938,NM_001001551	chr9,chr9	-,+	FRMD3,C9orf103	1730,86364
chr19:57060487-57060900	chr19	+	57060491	57060773	True	NR_030740,NM_020828	chr19,chr19	-,+	ZNF667,ZFP28	-71721,-10233
chr16:27435486-27437035	chr16	+	27435675	27436857	True	NR_037158,NM_021798	chr16,chr16	-,+	LOC283888,IL21R	27909,1721
chr4:141348563-141348776	chr4	+	141348658	141348752	True	NM_004362,NM_001153663,NM_001130675	chr4,chr4,chr4	-,+,-	CLGN,SCOC,CLGN	113,-54045,113
chr8:17559351-17559660	chr8	+	17559351	17559704	True	NM_020749,NM_006207	chr8,chr8	-,+	MTUS1,PDGFRL	-4105,-125466
chr9:100397578-100397851	chr9	+	100397611	100397694	True	NM_139246,NM_002486	chr9,chr9	-,+	TSTD2,NCBP1	-1649,-1964
chr11:45868076-45868741	chr11	+	45868239	45868741	True	NM_021117,NM_001080446,NM_001127457	chr11,chr11,chr11	+,-,+	CRY2,C11orf94,CRY2	215,60142,41
chr6:25667935-25669059	chr6	+	25668012	25669014	True	NM_170745,NM_006998	chr6,chr6	-,+	HIST1H2AA,SCGN	57826,-15644
chr5:99726220-99726714	chr5	+	99726288	99726562	True	NM_198507,NR_027503	chr5,chr5	+,-	FAM174A,LOC100133050	144561,-2330
chr5:99726220-99726714	chr5	-	98858362	98859231	False	NM_001270,NR_036530	chr5,chr5	-,+	CHD1,LOC100289230	-596124,-593575
chr5:99726220-99726714	chr5	+	99727331	99728200	False	NM_198507,NR_027503	chr5,chr5	+,-	FAM174A,LOC100133050	142923,-3373
chr3:50539700-50540017	chr3	+	50539754	50539890	True	NM_006030,NM_016173,NM_001005505,NM_001174051	chr3,chr3,chr3,chr3	-,+,-,-	CACNA2D2,HEMK1,CACNA2D2,CACNA2D2	1052,67018,1052,1052
chr8:110655104-110656270	chr8	+	110655185	110656268	True	NM_001099750,NM_004215,NM_001099751,NM_001099747,NM_001099753,NM_001099752,NM_001099755,NM_001099754,NM_001099756,NM_017786,NM_001099748,NM_001099749	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,+,-,-,-,-,-,-,-,-,-,-	SYBU,EBAG9,SYBU,SYBU,SYBU,SYBU,SYBU,SYBU,SYBU,SYBU,SYBU,SYBU	4915,-102926,1605,4915,834,1605,834,834,-88,4915,4915,4915
chrX:17648270-17649987	chrX	+	17648383	17649989	True	NM_001136024,NR_033348	chrX,chrX	+,-	NHS,RAI2	3423,229008
chr16:58327570-58328577	chr16	+	58327736	58328228	True	NM_014157,NM_001080492	chr16,chr16	+,-	CCDC113,PRSS54	-43947,773
chr16:2076483-2076700	chr16	+	2076561	2076657	True	NM_001130012,NM_178167,NM_001099456,NM_004785	chr16,chr16,chr16,chr16	+,-,+,+	SLC9A3R2,ZNF598,NPW,SLC9A3R2	230,-16798,-7091,230
chr14:105770062-105771593	chr14	+	105770131	105771451	True	NM_001519,NM_015197,NM_001100913	chr14,chr14,chr14	-,+,+	BRF1,PACS2,PACS2	-2802,9629,9629
chrX:138906183-138906580	chrX	+	138906397	138906530	True	NM_173694,NM_000133,NM_001010986	chrX,chrX,chrX	-,+,-	ATP11C,F9,ATP11C	7974,-293560,7974
chr1:39319223-39319898	chr1	+	39319480	39319737	True	NM_001136275,NM_022157	chr1,chr1	+,-	AKIRIN1,RRAGC	137178,5660
chr6:53014387-53016040	chr6	+	53014558	53015760	True	NM_012347,NM_003643	chr6,chr6	+,-	FBXO9,GCM1	-78847,-934
chr8:6410946-6411559	chr8	+	6410960	6411547	True	NM_001118888,NM_001147,NM_001118887,NM_024596	chr8,chr8,chr8,chr8	-,-,-,+	ANGPT2,ANGPT2,ANGPT2,MCPH1	9287,9287,9287,-146898
chr19:51378272-51378774	chr19	+	51378323	51378737	True	NR_002948,NM_005551,NM_001002231	chr19,chr19,chr19	-,+,+	KLKP1,KLK2,KLK2	20967,-1685,-1685
chr7:131350937-131351364	chr7	+	131351047	131351407	True	NM_005397,NM_013255	chr7,chr7	-,+	PODXL,MKLN1	-109671,-338510
chr22:39898695-39898923	chr22	+	39898751	39898961	True	NM_019008,NM_194326	chr22,chr22	+,-	SMCR7L,RPS19BP1	-518,29949
chr2:74735384-74735608	chr2	+	74735413	74735660	True	NR_024606,NM_001009812,NM_032673,NM_016170	chr2,chr2,chr2,chr2	+,-,-,+	LOC151534,LBX2,PCGF1,TLX2	-5720,-4970,-592,5935
chr5:98265477-98265908	chr5	+	98265517	98265630	True	NM_001270,NR_036530	chr5,chr5	-,+	CHD1,LOC100289230	-3279,-730
chr8:34180557-34181171	chr8	+	34180592	34181202	True	NM_032509,NM_024025	chr8,chr8	+,-	MAK16,DUSP26	-837960,-723153
chr2:95835467-95835746	chr2	+	95835628	95835746	True	NM_021088,NM_001017396,NM_032788	chr2,chr2,chr2	+,+,-	ZNF2,ZNF2,ZNF514	-4505,-4505,-10365
chr16:56658989-56659279	chr16	+	56659019	56659257	True	NM_175617,NM_176870,NR_001447,NM_005950	chr16,chr16,chr16,chr16	+,+,+,-	MT1E,MT1M,MT1L,MT1G	327,7276,-7697,42770
chr22:24978625-24979434	chr22	+	24978630	24979460	True	NM_207644,NM_013430	chr22,chr22	-,+	C22orf36,GGT1	9625,257
chr19:7045879-7046507	chr19	+	7046180	7046410	True	NM_001164419,NM_144614	chr19,chr19	-,+	MBD3L4,MBD3L2	-5996,2940
chr19:7045879-7046507	chr19	-	7024380	7024610	False	NM_001164419,NM_001136507	chr19,chr19	-,+	MBD3L4,MBD3L5	15633,5983
chr19:1591400-1592117	chr19	+	1591408	1592040	True	NR_026557,NM_003926	chr19,chr19	+,-	PLK5P,MBD3	-67381,662
chr12:21002700-21003304	chr12	+	21002895	21002971	True	NM_019844,NM_021094	chr12,chr12	+,-	SLCO1B3,SLCO1A2	-39320,484919
chr4:185748793-185750093	chr4	+	185748956	185749946	True	NM_152683,NM_001995	chr4,chr4	+,-	CCDC111,ACSL1	-178240,-1741
chr16:66462193-66462995	chr16	+	66462313	66462989	True	NM_001172643,NM_001136106,NM_001197224,NM_001178020,NM_001197225	chr16,chr16,chr16,chr16,chr16	-,+,+,+,+	TK2,BEAN1,BEAN1,BEAN1,BEAN1	121255,-1548,-1548,-1548,-1548
chr12:104695408-104696426	chr12	+	104695420	104696226	True	NM_006166,NM_001008394	chr12,chr12	-,+	NFYB,EID3	-163380,1322
chr9:136856357-136856600	chr9	+	136856356	136856438	True	NM_003371,NR_015427,NM_001134398	chr9,chr9,chr9	-,+,-	VAV2,NCRNA00094,VAV2	1058,34122,1058
chr1:103530169-103530796	chr1	+	103530329	103530773	True	NM_017619,NM_001190709	chr1,chr1	+,-	RNPC3,COL11A1	537804,43332
chr16:1523939-1524379	chr16	+	1524123	1524407	True	NM_001287,NM_001114331,NM_016111	chr16,chr16,chr16	-,-,+	CLCN7,CLCN7,TELO2	728,728,18944
chr15:65283606-65284388	chr15	+	65283655	65284415	True	NM_001127890,NM_178859,NM_001127889,NM_016630	chr15,chr15,chr15,chr15	-,+,-,-	SPG21,OSTBETA,SPG21,SPG21	-1404,53292,-1843,-1404
chr20:32893742-32894333	chr20	+	32893937	32894140	True	NM_001672,NM_000687,NM_001161766	chr20,chr20,chr20	+,-,-	ASIP,AHCY,AHCY	-45838,-2722,5519
chr15:83032258-83033657	chr15	+	83032410	83033519	True	NR_004847,NR_024474,NM_001164465	chr15,chr15,chr15	+,+,-	UBE2Q2P2,UBE2Q2P3,GOLGA6L10	-8691,-8691,-14212
chr15:83032258-83033657	chr15	-	83173222	83174039	False	NR_026811,NR_033936,NR_033579	chr15,chr15,chr15	-,-,+	LOC80154,LOC727849,LOC440297	8926,8955,-43247
chr15:83032258-83033657	chr15	-	82788645	82789462	False	NR_026811,NR_033936,NR_033579	chr15,chr15,chr15	-,-,+	LOC80154,LOC727849,LOC440297	8925,8954,-35256
chr15:83032258-83033657	chr15	+	82655913	82657022	False	NR_004847,NR_024474,NM_001164465	chr15,chr15,chr15	+,+,-	UBE2Q2P2,UBE2Q2P3,GOLGA6L10	-8681,-8681,-14207
chr20:44539322-44539647	chr20	+	44539328	44539624	True	NM_001167594,NM_006227,NM_182676	chr20,chr20,chr20	+,-,-	CTSA,PLTP,PLTP	-19788,1212,1212
chr1:13700972-13701494	chr1	+	13701148	13701410	True	NM_001099790,NM_001099850,NM_001099851	chr1,chr1,chr1	-,-,+	PRAMEF19,PRAMEF18,PRAMEF17	-2743,-2743,14677
chr1:13700972-13701494	chr1	+	13480312	13480574	False	NM_001045480,NM_001099790,NM_001099850	chr1,chr1,chr1	+,-,-	PRAMEF16,PRAMEF19,PRAMEF18	14679,-2743,-2743
chr1:169791030-169791934	chr1	+	169791252	169791982	True	NM_018186,NM_033418	chr1,chr1	+,-	C1orf112,METTL18	-26753,-27221
chr1:114429901-114431232	chr1	+	114429924	114431196	True	NM_001010922,NM_022836	chr1,chr1	-,+	BCL2L15,DCLRE1B	-35,16718
chr12:106975980-106976404	chr12	+	106975983	106976290	True	NM_006825,NM_213594	chr12,chr12	-,+	CKAP4,RFX4	-334270,742
chr10:92676031-92677429	chr10	+	92676122	92677444	True	NM_001104546,NM_014391	chr10,chr10	+,-	RPP30,ANKRD1	-44472,3638
chr14:64188016-64189103	chr14	+	64188187	64188827	True	NM_030791,NM_015180	chr14,chr14	-,+	SGPP1,SYNE2	5983,130855
chr1:49241727-49242087	chr1	+	49241747	49241964	True	NM_024603,NM_001135181	chr1,chr1	-,+	BEND5,SLC5A9	636,-553441
chr19:3361741-3362196	chr19	+	3361798	3362196	True	NM_005597,NM_001136503,NM_205843	chr19,chr19,chr19	+,-,+	NFIC,C19orf77,NFIC	4376,118394,-2233
chr17:56230682-56232672	chr17	+	56230924	56232656	True	NR_002307,NM_017777,NM_012374	chr17,chr17,chr17	+,-,+	MSX2P1,MKS1,OR4D1	1663,64060,86
chr12:6882566-6882811	chr12	+	6882618	6882826	True	NM_002286,NR_026581,NM_002824	chr12,chr12,chr12	+,-,+	LAG3,MLF2,PTMS	-999,-19982,-7128
chr17:12920120-12920677	chr17	+	12920123	12920699	True	NM_014859,NM_018127,NM_001165962,NM_173717	chr17,chr17,chr17,chr17	+,-,-,-	ARHGAP44,ELAC2,ELAC2,ELAC2	-227345,732,732,732
chr7:145612170-145613400	chr7	+	145612196	145613267	True	NM_014141,NM_022445	chr7,chr7	+,-	CNTNAP2,TPK1	200185,-1079050
chr14:104551427-104551882	chr14	+	104551466	104551744	True	NM_004894,NM_001080464	chr14,chr14	-,+	C14orf2,ASPG	-163563,278
chr17:6659010-6659458	chr17	+	6659153	6659505	True	NM_199139,NM_177550,NM_017523	chr17,chr17,chr17	+,-,+	XAF1,SLC13A5,XAF1	-48,-42413,-48
chr15:90436189-90437033	chr15	+	90436314	90437009	True	NR_023361,NM_005829,NM_198526,NR_037582	chr15,chr15,chr15,chr15	-,-,+,-	AP3S2,AP3S2,ZNF710,AP3S2	658,658,107742,658
chr10:26981062-26982174	chr10	+	26981157	26982014	True	NM_014317,NM_001012750	chr10,chr10	+,-	PDSS1,ABI1	4580,168064
chr22:45680343-45680674	chr22	+	45680416	45680539	True	NM_006953,NM_001009880,NM_001167574	chr22,chr22,chr22	+,-,+	UPK3A,KIAA0930,UPK3A	328,-43766,328
chr19:39370256-39370624	chr19	+	39370262	39370452	True	NM_198445,NM_001001716,NM_001195833	chr19,chr19,chr19	-,+,-	RINL,NFKBIB,RINL	-1343,20162,-1343
chr1:147013855-147014796	chr1	+	147014055	147014817	True	NM_004326,NM_016361	chr1,chr1	+,-	BCL9,ACP6	-924,127867
chr15:44091081-44092152	chr15	+	44091364	44092025	True	NM_016400,NM_001033517,NM_001199885,NR_037673,NR_037672,NM_001199878,NM_001199876,NR_031695,NM_001199875,NM_001018108	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,-,+,+,+,+,+,-,+,+	C15orf63,SERINC4,C15orf63,SERF2-C15ORF63,SERF2,SERF2,SERF2,MIR1282,SERF2,SERF2	593,281,593,-7241,-7241,-6840,-7241,-5407,-7241,-7375
chr3:197884280-197884561	chr7	-	31160	31210	True	NM_002607,NM_020223	chr7,chr7	-,+	PDGFA,FAM20C	528321,161758
chr3:197884280-197884561	chr3	+	197884313	197884593	False	NR_003291	chr3	-	LOC348840	-76771
chr3:197884280-197884561	chr16	+	90172892	90173166	False	NM_001098173,NR_023348	chr16,chr16	-,+	PRDM7,GAS8	-30554,-83935
chr14:64804575-64804935	chr14	+	64804580	64804860	True	NM_005956,NR_033777,NM_001040276	chr14,chr14,chr14	+,-,-	MTHFD1,TEX21P,ESR2	49898,9519,458
chr1:151148494-151149189	chr1	+	151148614	151149150	True	NM_013353,NR_037937	chr1,chr1	-,+	TMOD4,SCNM1	-67,-10167
chr10:94821345-94821975	chr10	+	94821348	94821828	True	NM_013451,NM_183374	chr10,chr10	-,+	MYOF,CYP26C1	420296,-378
chr10:43919457-43920160	chr10	+	43919754	43920144	True	NR_026693,NM_001098204	chr10,chr10	+,-	ZNF487P,HNRNPF	12429,-15058
chr11:10473036-10474587	chr11	+	10473213	10474355	True	NM_001025390,NM_001025389,NM_000480,NM_001172430,NM_001172431,NM_001190702	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,-	AMPD3,AMPD3,AMPD3,AMPD3,AMPD3,MTRNR2L8	3125,2310,-1040,8322,-1396,56420
chr4:111542653-111542964	chr4	+	111542756	111542936	True	NM_001977,NM_000325	chr4,chr4	+,-	ENPEP,PITX2	-145591,1368
chr14:50476066-50476515	chr14	+	50476157	50476270	True	NM_001012706,NM_001663	chr14,chr14	-,+	C14orf182,ARF6	-1919,-116486
chr8:38826712-38827208	chr8	+	38826729	38826984	True	NM_001024380,NM_153692	chr8,chr8	-,+	TM2D2,HTRA4	27107,4683
chr5:615341-616748	chr5	+	615603	616697	True	NM_007030,NM_018140	chr5,chr5	-,+	TPPP,CEP72	76871,-3254
chr4:467952-468697	chr4	+	467988	468228	True	NR_002451,NM_001127178	chr4,chr4	-,+	ABCA11P,PIGG	10,24760
chr20:5488906-5490618	chr20	+	5488920	5490144	True	NR_029405,NR_015406	chr20,chr20	+,-	LOC643406,LOC149837	-37129,-3678
chr10:127584065-127584274	chr10	+	127584114	127584296	True	NM_018180,NM_145235	chr10,chr10	-,+	DHX32,FANK1	-14230,811
chr1:31989681-31989896	chr1	+	31989694	31989886	True	NR_033688,NR_027085	chr1,chr1	-,+	PEF1,LOC284551	120382,-5709
chr7:102564539-102565246	chr7	+	102564861	102565054	True	NM_145032,NM_005824	chr7,chr7	-,+	FBXL13,LRRC17	150020,-11581
chr6:80250074-80250689	chr6	+	80250196	80250696	True	NM_031469,NM_001122769,NM_181714	chr6,chr6,chr6	+,-,-	SH3BGRL2,LCA5,LCA5	90303,-3049,-3049
chr7:155757846-155758429	chr7	+	155757915	155758409	True	NM_000193,NM_053043	chr7,chr7	-,+	SHH,RBM33	-152948,-320763
chr12:15707923-15709496	chr12	+	15708314	15709530	True	NM_030668,NM_030669,NM_004447,NM_030671,NM_030670	chr12,chr12,chr12,chr12,chr12	+,+,-,+,+	PTPRO,PTPRO,EPS8,PTPRO,PTPRO	-9080,-9080,233030,-9080,-9080
chr14:38676623-38677153	chr14	+	38676626	38677186	True	NM_001049,NM_175060	chr14,chr14	+,-	SSTR1,CLEC14A	17,48438
chr19:56507874-56509873	chr19	+	56508618	56509554	True	NM_176810,NM_153447	chr19,chr19	-,+	NLRP13,NLRP5	-64916,1537
chr7:28221665-28222613	chr7	+	28221694	28222658	True	NR_034097,NM_175061	chr7,chr7	+,-	LOC100128081,JAZF1	-1669,-1257
chr3:174589660-174590176	chr3	+	174589817	174590222	True	NM_207015,NM_031955	chr3,chr3	+,-	NAALADL2,SPATA16	-12765,-1730759
chr12:57644119-57645048	chr12	+	57644274	57644946	True	NM_145064,NM_020142,NM_001166357	chr12,chr12,chr12	-,-,+	STAC3,NDUFA4L2,SHMT2	73,-9799,-20189
chr11:59616172-59617254	chr11	+	59616233	59617129	True	NM_004177,NM_005142	chr11,chr11	+,-	STX3,GIF	-93760,-3259
chr7:138460594-138461816	chr7	+	138460877	138461619	True	NM_130841,NM_001085429	chr7,chr7	-,+	ATP6V0A4,TMEM213	-2095,21119
chr14:105715865-105716135	chr14	+	105715963	105716123	True	NM_145685,NM_033271	chr14,chr14	-,+	BRF1,BTBD6	-1741,-1135
chr1:28908611-28909301	chr1	+	28908794	28909316	True	NR_024127,NR_002987,NR_003077,NM_152304,NR_002976,NM_001193532,NR_003035	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,+,-	SNHG12,SNORA61,SNORD99,RAB42,SNORA44,RAB42,SNORA16A	-428,-2389,-3460,9395,-1770,9690,-1229
chr6:159066172-159067199	chr6	+	159066200	159067053	True	NM_006519,NM_001009991	chr6,chr6	-,+	DYNLT1,SYTL3	-396,3992
chr1:1178503-1178741	chr1	+	1178510	1178766	True	NM_080605,NM_001014980	chr1,chr1	+,-	B3GALT6,FAM132A	-10932,3386
chr6:1103430-1105426	chr6	+	1103453	1105192	True	NR_027116,NR_027115,NM_033260	chr6,chr6,chr6	-,-,+	LOC285768,LOC285768,FOXQ1	-1886,-1886,207482
chr12:112547824-112548872	chr12	+	112547901	112548724	True	NM_001143906,NM_024953	chr12,chr12	+,-	TRAFD1,NAA25	14624,-1266
chr1:209978995-209979215	chr1	+	209979053	209979115	True	NM_006147,NM_014388	chr1,chr1	-,+	IRF6,DIEXF	414,22196
chr19:18386165-18388050	chr19	+	18386384	18386788	True	NM_025249,NR_036155,NM_005354,NM_001145304,NM_001145305	chr19,chr19,chr19,chr19,chr19	-,+,-,-,-	KIAA1683,MIR3188,JUND,KIAA1683,KIAA1683	-1065,6098,5694,-1065,-1065
chr19:14584858-14585189	chr19	+	14584863	14585113	True	NM_000955,NM_001146693	chr19,chr19	-,+	PTGER1,LOC100130932	1111,14644
chr13:33762275-33763058	chr13	+	33762323	33763107	True	NM_004795,NM_178007	chr13,chr13	+,-	KL,STARD13	-171803,-2107
chr10:116287888-116288974	chr10	+	116288122	116288880	True	NM_198496,NM_006720	chr10,chr10	+,-	VWA2,ABLIM1	-289156,-1437
chr9:78506238-78506490	chr9	+	78506242	78506428	True	NM_006200,NR_031679,NM_001190482	chr9,chr9,chr9	+,-,+	PCSK5,MIR548H3,PCSK5	-733,-167498,-733
chr6:14808213-14808990	chr6	+	14808456	14809006	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	437520,854335
chr14:100071899-100073256	chr14	+	100071965	100073089	True	NM_032425,NM_001144995	chr14,chr14	+,-	HHIPL1,CCDC85C	38390,-1238
chr17:1183855-1184076	chr17	+	1183873	1184055	True	NM_001159746,NM_172367	chr17,chr17	-,+	ABR,TUSC5	-93257,-967
chr3:123711192-123711840	chr3	+	123711291	123711861	True	NR_028136,NM_017578	chr3,chr3	+,-	KALRN,ROPN1	101696,-1092
chr3:123711192-123711840	chr3	-	125687434	125687484	False	NM_001012337,NM_001195223	chr3,chr3	+,-	ROPN1B,ALG1L	543,-31547
chr3:57262474-57263832	chr3	+	57262650	57263664	True	NM_012096,NM_003865	chr3,chr3	+,-	APPL1,HESX1	-936,-28370
chr2:3706054-3706380	chr2	+	3706088	3706156	True	NM_002936,NM_018436	chr2,chr2	-,+	RNASEH1,ALLC	-100148,-353
chr10:102090349-102091382	chr10	+	102090368	102091298	True	NM_016112,NM_005063	chr10,chr10	-,+	PKD2L1,SCD	-125,15473
chr1:162760744-162762625	chr10	+	38645633	38646012	False	NR_027269,NR_003086	chr10,chr10	-,+	SEPT7L,HSD17B7P2	45819,-376
chr1:162760744-162762625	chr1	+	162760842	162762404	True	NM_178550,NM_016371	chr1,chr1	-,+	C1orf110,HSD17B7	76251,-397
chr5:37081718-37081962	chr5	+	37081718	37081969	True	NM_133433,NM_023073	chr5,chr5	+,-	NIPBL,C5orf42	-204911,167619
chr1:114448769-114449203	chr1	+	114448975	114449118	True	NM_022836,NM_006594	chr1,chr1	+,-	DCLRE1B,AP4B1	-1111,-1234
chr10:72359755-72360212	chr10	+	72359821	72360193	True	NM_001083116,NM_080722,NM_005041	chr10,chr10,chr10	-,+,-	PRF1,ADAMTS14,PRF1	2388,72365,2388
chr2:170621083-170622263	chr2	+	170621186	170622315	True	NM_144711,NM_014168	chr2,chr2	+,-	KLHL23,METTL5	-30888,59095
chr3:47822142-47822920	chr3	+	47822249	47822780	True	NM_014966,NM_003074	chr3,chr3	+,-	DHX30,SMARCC1	21618,675
chr16:452839-453894	chr16	+	452997	453519	True	NM_020664,NM_021259,NM_005009	chr16,chr16,chr16	+,-,+	DECR2,TMEM8A,NME4	-1200,-21047,-5866
chr19:48966166-48966465	chr19	+	48966187	48966505	True	NM_013348,NM_017457,NM_004228,NM_001080434,NM_170720	chr19,chr19,chr19,chr19,chr19	+,+,+,-,+	KCNJ14,CYTH2,CYTH2,LMTK3,KCNJ14	-7472,5959,5959,49991,-1732
chr16:89883888-89884099	chr16	+	89883953	89884121	True	NM_032451,NM_000135,NM_001018112	chr16,chr16,chr16	+,-,-	SPIRE2,FANCA,FANCA	10785,-888,-888
chr11:112832818-112833428	chr11	+	112832853	112833455	True	NR_034101,NM_001076682,NM_000615,NM_181351	chr11,chr11,chr11,chr11	-,+,+,+	LOC100288346,NCAM1,NCAM1,NCAM1	311218,-909,-909,-909
chr2:11886248-11886611	chr2	+	11886261	11886535	True	NM_012344,NM_145693	chr2,chr2	-,+	NTSR2,LPIN1	-75932,204
chr9:140501447-140501670	chr9	+	140501505	140501663	True	NM_152285,NM_032937	chr9,chr9	+,-	ARRDC1,C9orf37	-1460,11695
chr5:141016091-141016361	chr5	+	141016096	141016316	True	NM_001130029,NM_173828,NM_003883	chr5,chr5,chr5	+,+,-	RELL2,RELL2,HDAC3	200,200,157
chr7:153750973-153751249	chr7	+	153750977	153751297	True	NM_130797,NM_007349	chr7,chr7	+,-	DPP6,PAXIP1	-1251,1043435
chr7:153750973-153751249	chr7	-	149743608	149743868	False	NM_145230,NR_027040	chr7,chr7	+,-	ATP6V0E2,LOC401431	-173602,-172657
chr8:146280463-146280800	chr8	+	146280465	146280799	True	NR_023392	chr8	-	ZNF252	-52180
chr2:24345056-24345859	chr2	+	24345284	24345906	True	NM_001145710,NM_199346	chr2,chr2	+,-	LOC375190,PFN4	443,295
chr1:1474192-1474629	chr1	+	1474308	1474500	True	NM_001170536,NM_001114748	chr1,chr1	+,-	ATAD3A,C1orf70	-26449,1290
chr9:102865764-102866785	chr9	+	102866168	102866821	True	NM_015051,NM_014425,NM_183245	chr9,chr9,chr9	-,+,+	ERP44,INVS,INVS	-4838,-4718,-4718
chr5:192668-193182	chr5	+	192795	193119	True	NM_145265,NM_001080478	chr5,chr5	-,+	CCDC127,LRRC14B	25228,-1223
chr2:121222785-121223213	chr2	+	121222808	121223252	True	NM_002193,NR_027181	chr2,chr2	+,-	INHBB,LOC84931	-119140,723
chr14:57864364-57865242	chr14	+	57864647	57865147	True	NM_018168,NM_001011713	chr14,chr14	-,+	C14orf105,NAA30	95480,-7428
chr14:93580119-93580633	chr14	+	93580149	93580655	True	NM_001142594,NR_002808,NM_014216,NM_001142593	chr14,chr14,chr14,chr14	-,+,-,-	ITPK1,ITPK1-AS1,ITPK1,ITPK1	1658,-46403,1658,1658
chr20:30226374-30227519	chr20	+	30226560	30227283	True	NM_032609,NM_001191	chr20,chr20	+,-	COX4I2,BCL2L1	-920,83423
chr1:152768725-152769244	chr1	+	152768729	152769115	True	NM_178352,NM_178351	chr1,chr1	+,-	LCE1D,LCE1C	111,10042
chr2:43035848-43036076	chr2	+	43035850	43036068	True	NM_020744,NM_012205	chr2,chr2	+,-	MTA3,HAAO	-240230,-16099
chr16:31161003-31161347	chr16	+	31161008	31161390	True	NM_173502,NM_001170634	chr16,chr16	-,+	PRSS36,FUS	75,30040
chr20:35090240-35090935	chr20	+	35090311	35090955	True	NM_183006,NM_032214,NM_001042486	chr20,chr20,chr20	+,-,+	DLGAP4,SLA2,DLGAP4	-220,183653,-520
chr10:81444392-81444867	chr10	+	81444401	81444915	True	NR_027512,NM_001098668	chr10,chr10	+,-	LOC650623,SFTPA2	-1721,-124238
chr10:81444392-81444867	chr10	+	52419619	52419669	False	NM_147156,NM_001079516	chr10,chr10	-,+	SGMS1,ASAH2B	-35882,80038
chr6:36408201-36409336	chr6	+	36408458	36409266	True	NM_173562,NM_152990	chr6,chr6	+,-	KCTD20,PXT1	1277,1450
chr20:3194138-3194691	chr20	+	3194145	3194637	True	NM_033453,NM_181493,NM_023935	chr20,chr20,chr20	+,+,-	ITPA,ITPA,DDRGK1	-4141,-4141,-8850
chr22:42335967-42337205	chr22	+	42336292	42337186	True	NM_024053,NM_001002876,NM_001110215,NR_024355	chr22,chr22,chr22,chr22	-,-,-,+	CENPM,CENPM,CENPM,LOC339674	6012,6012,-69,11004
chr3:179159462-179159888	chr3	+	179159551	179159938	True	NM_033540,NM_021629	chr3,chr3	+,-	MFN1,GNB4	-94129,9484
chr20:2634592-2635509	chr20	+	2634627	2635546	True	NR_004399,NR_002981,NR_031699,NR_003078,NM_006899,NM_006392,NR_027700,NR_002739,NM_174855,NM_174856,NR_002738	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,+,+,+,-,+,+,+,-,-,+	SNORD86,SNORA51,MIR1292,SNORD110,IDH3B,NOP56,NOP56,SNORD56,IDH3B,IDH3B,SNORD57	1196,166,-1256,12,9348,-1425,-1425,1723,9348,9348,2038
chr14:24045927-24046270	chr14	+	24045931	24046231	True	NM_001146028,NR_023314,NM_032452,NM_003917	chr14,chr14,chr14,chr14	-,+,-,-	JPH4,THTPA,JPH4,AP1G2	1828,-20784,1828,-8652
chr3:11197278-11197999	chr3	+	11197331	11197965	True	NM_001098212,NR_027102	chr3,chr3	+,-	HRH1,LOC285370	-1168,-391454
chr17:74583757-74585238	chr17	+	74584135	74585099	True	NM_006456,NR_004395	chr17,chr17	-,+	ST6GALNAC2,SNORD1A	-1990,-26471
chr16:224444-224889	chr16	+	224494	224734	True	NM_001077350,NM_000558,NM_000517,NM_001003938,NM_005331	chr16,chr16,chr16,chr16,chr16	-,+,+,+,+	NPRL3,HBA1,HBA2,HBM,HBQ1	-35822,1944,-1699,-8572,5598
chr21:40829577-40830355	chr21	+	40829989	40830123	True	NM_007341,NM_152505	chr21,chr21	+,-	SH3BGR,LCA5L	-6268,-13861
chr15:79296378-79296589	chr15	+	79296385	79296519	True	NM_153815,NM_206839	chr15,chr15	-,+	RASGRF1,MORF4L1	1533,-131264
chr1:87018957-87019337	chr1	+	87019004	87019342	True	NR_024602,NM_020729,NM_012128	chr1,chr1,chr1	+,-,+	CLCA4,ODF2L,CLCA4	-6296,-156979,-6296
chr1:26372828-26373061	chr1	+	26372892	26372968	True	NM_001004434,NM_032513,NM_004455	chr1,chr1,chr1	-,-,+	SLC30A2,SLC30A2,EXTL1	-288,-288,-24672
chr12:55517968-55519005	chr12	+	55517989	55518741	True	NM_001005243,NM_001136030	chr12,chr12	+,-	OR9K2,KIAA0748	4811,-139533
chr11:75108732-75109105	chr11	+	75108887	75108957	True	NM_001005,NM_001039548,NR_000005,NR_000025	chr11,chr11,chr11,chr11	+,-,+,+	RPS3,KLHL35,SNORD15A,SNORD15B	1604,32767,2477,6507
chr14:37126313-37126713	chr14	+	37126364	37126762	True	NM_006194,NM_014360	chr14,chr14	+,-	PAX9,NKX2-8	10,-74578
chr5:140235821-140236297	chr5	+	140235996	140236311	True	NM_014005,NM_031860,NM_002109,NM_031859,NM_018901,NM_031857	chr5,chr5,chr5,chr5,chr5,chr5	+,+,-,+,+,+	PCDHA9,PCDHA10,HARS,PCDHA10,PCDHA10,PCDHA9	-8690,-413,-165025,-413,-413,-8690
chrX:69502104-69503873	chrX	+	69502122	69503778	True	NM_012310,NM_016484,NM_001032726	chrX,chrX,chrX	+,-,+	KIF4A,PDZD11,RAB41	6100,6077,-153
chr1:201393990-201394518	chr1	+	201393997	201394339	True	NM_003281,NR_026667	chr1,chr1	-,+	TNNI1,RPS10P7	-3123,94692
chr1:145522923-145524247	chr1	+	145523074	145524234	True	NR_002328,NM_003846,NM_001184795,NM_003637	chr1,chr1,chr1,chr1	-,+,+,+	GNRHR2,PEX11B,PEX11B,ITGA10	-6998,-6968,-6573,755
chr5:40799152-40800493	chr5	+	40799326	40800488	True	NM_032587,NM_006251,NM_206907	chr5,chr5,chr5	+,-,-	CARD6,PRKAA1,PRKAA1	40921,-1029,-1029
chr19:9360982-9361845	chr19	+	9361064	9361797	True	NM_001005191,NM_001079935	chr19,chr19	-,+	OR7D4,OR7E24	-35517,78
chr16:2571600-2571944	chr16	+	2571645	2571720	True	NM_001048212,NM_001198569,NM_015944,NM_001145815,NM_001694	chr16,chr16,chr16,chr16,chr16	-,+,+,+,+	CEMP1,ATP6V0C,AMDHD2,AMDHD2,ATP6V0C	9740,-7974,-1338,-1338,-7830
chr19:35771741-35771946	chr19	+	35771744	35771920	True	NM_152481,NM_021175	chr19,chr19	-,+	FAM187B,HAMP	-52116,1489
chr3:9944589-9945189	chr3	+	9944651	9945239	True	NM_001193380,NM_153480,NM_001199552,NM_153483	chr3,chr3,chr3,chr3	+,+,-,+	IL17RE,IL17RE,CIDEC,IL17RE	-190,-190,-22713,-406
chr5:67455593-67457157	chr5	+	67455883	67457189	True	NM_005582,NM_181523	chr5,chr5	-,+	CD180,PIK3R1	-963266,65272
chr3:46742378-46742776	chr3	+	46742531	46742605	True	NM_001190707,NM_147196,NR_033815,NM_147129	chr3,chr3,chr3,chr3	-,+,-,-	ALS2CL,TMIE,ALS2CL,ALS2CL	-7385,217,-7337,-7337
chr8:27168013-27168268	chr8	+	27168046	27168316	True	NM_173174,NM_171982	chr8,chr8	+,-	PTK2B,TRIM35	682,568
chr17:63101446-63101796	chr17	+	63101645	63101761	True	NM_006572,NM_001165933	chr17,chr17	-,+	GNA13,RGS9	-48725,31694
chr5:145329862-145330196	chr5	+	145329899	145330210	True	NM_152550,NM_001080516	chr5,chr5	+,-	SH3RF2,GRXCR2	-13824,-77368
chr3:190231364-190231677	chr3	+	190231369	190231511	True	NM_001167928,NM_001167929,NM_001167931,NM_001167930,NM_134470,NM_207316,NM_002182	chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,+,-,+	IL1RAP,IL1RAP,IL1RAP,IL1RAP,IL1RAP,TMEM207,IL1RAP	328,328,328,328,328,-63704,328
chr7:130127779-130128880	chr7	+	130127780	130128908	True	NR_029899,NR_004382,NM_177525,NM_177524,NM_002402	chr7,chr7,chr7,chr7,chr7	+,-,+,+,+	MIR335,MESTIT1,MEST,MEST,MEST	7043,2155,2264,-1785,3029
chr5:178014371-178014799	chr5	+	178014389	178014837	True	NM_173465,NM_058230	chr5,chr5	-,+	COL23A1,ZNF354B	2769,272116
chr17:7148064-7148908	chr17	+	7148093	7148195	True	NM_015343,NM_007278,NM_203415,NM_203414,NM_203413,NM_015362,NM_001143775,NM_024297	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,+,+,+,-,-	CTDNEP1,GABARAP,C17orf81,C17orf81,C17orf81,C17orf81,CTDNEP1,PHF23	7114,-2340,7176,7355,7355,7355,6850,-5268
chr22:44421290-44421854	chr22	+	44421478	44421706	True	NM_013327,NM_138814	chr22,chr22	+,-	PARVB,PNPLA5	-1361,-133585
chr13:36868778-36870319	chr13	+	36869162	36870198	True	NM_001144981,NM_001144983,NM_001144982,NM_001144985,NM_001144984,NM_001144986,NM_001198908,NM_001111046,NM_001198910	chr13,chr13,chr13,chr13,chr13,chr13,chr13,chr13,chr13	-,-,-,-,-,-,-,+,-	C13orf38,C13orf38,C13orf38,C13orf38,C13orf38,C13orf38,C13orf38,CCNA1,C13orf38-SOHLH2	1852,1852,1852,1852,1852,1852,1852,135768,1852
chrX:27765163-27765734	chrX	+	27765210	27765718	True	NM_001136533,NM_001017930	chrX,chrX	+,-	DCAF8L2,DCAF8L1	-335,233898
chr22:24103292-24103788	chr22	+	24103737	24103797	True	NM_213720,NM_013378,NM_182520	chr22,chr22,chr22	-,-,+	CHCHD10,VPREB3,C22orf15	6394,-7107,1410
chr20:17664612-17665660	chr20	+	17664662	17665488	True	NM_001042576,NM_001159495,NM_004587	chr20,chr20,chr20	-,+,-	RRBP1,BANF2,RRBP1	-1734,8831,-1734
chr10:960663-961464	chr10	+	960785	961430	True	NM_015155,NM_012341	chr10,chr10	-,+	LARP4B,GTPBP4	-29083,72918
chr8:11661446-11662274	chr8	+	11661547	11661995	True	NM_004462,NM_001908	chr8,chr8	+,-	FDFT1,CTSB	-1417,63715
chr4:76651811-76653532	chr4	+	76651917	76653537	True	NM_203505,NM_003715	chr4,chr4	-,+	G3BP2,USO1	-53250,-2147
chr17:36103358-36103617	chr17	+	36103366	36103665	True	NM_001165923,NM_032258,NM_000458	chr17,chr17,chr17	-,+,-	HNF1B,TBC1D3F,HNF1B	1481,180294,1481
chr2:207831741-207833232	chr2	+	207831894	207833264	True	NM_173077,NR_036227	chr2,chr2	+,-	CPO,MIR2355	-27667,141589
chr20:43027813-43029186	chr20	+	43027965	43029169	True	NM_178850,NR_037419,NM_000457,NM_001080472,NM_178849	chr20,chr20,chr20,chr20,chr20	+,+,+,-,+	HNF4A,MIR3646,HNF4A,FITM2,HNF4A	754,7590,754,-88076,754
chr3:237510-238298	chr3	+	237600	238333	True	NM_000564,NM_006614	chr3,chr3	-,+	IL5RA,CHL1	2913775,316
chr6:136870008-136870756	chr6	+	136870034	136870624	True	NM_000288,NM_001198616,NM_001198617,NM_003980	chr6,chr6,chr6,chr6	+,-,-,-	PEX7,MAP7,MAP7,MAP7	273077,1383,1383,1383
chr2:124782912-124783617	chr2	+	124783152	124783559	True	NM_032390,NM_130773	chr2,chr2	-,+	MKI67IP,CNTNAP5	-2288649,-339
chr5:148932680-148933176	chr5	+	148933020	148933181	True	NM_001892,NM_001001669,NM_001025105	chr5,chr5,chr5	-,+,-	CSNK1A1,ARHGEF37,CSNK1A1	-2013,27953,-2013
chr2:675675-676221	chr2	+	675888	676156	True	NM_018968,NM_152834	chr2,chr2	+,-	SNTG2,TMEM18	270397,1333
chr9:123688319-123689150	chr9	+	123688434	123689178	True	NM_005658,NR_024408,NM_001190945	chr9,chr9,chr9	-,+,-	TRAF1,LOC253039,TRAF1	45,-83165,2323
chr10:50750450-50751046	chr10	+	50750582	50751076	True	NM_020984,NM_000124	chr10,chr10	+,-	CHAT,ERCC6	66064,-3435
chr14:23835372-23835690	chr14	+	23835566	23835646	True	NM_032459,NM_172314,NM_005864,NM_022789	chr14,chr14,chr14,chr14	-,+,-,+	EFS,IL25,EFS,IL25	-724,6371,-724,6423
chr9:33290824-33291621	chr9	+	33290980	33291507	True	NM_147134,NM_002504,NM_004323,NM_147133	chr9,chr9,chr9,chr9	+,+,-,+	NFX1,NFX1,BAG1,NFX1	-613,-613,-26221,-613
chr15:67359488-67361356	chr15	+	67359590	67361248	True	NM_005902,NM_024666	chr15,chr15	+,-	SMAD3,AAGAB	-1446,185876
chr12:7249378-7250034	chr12	+	7249511	7249849	True	NR_026947,NM_001733	chr12,chr12	+,-	LOC283314,C1R	11054,-4468
chr6:97731334-97733097	chr6	+	97731348	97732893	True	NM_052904,NM_198468	chr6,chr6	+,-	KLHL32,MMS22L	-358903,-296
chr17:30410999-30411283	chr17	+	30411099	30411209	True	NR_033412,NR_002222	chr17,chr17	+,-	SH3GL1P1,ARGFXP2	-43795,67431
chr17:30410999-30411283	chr17	+	28995046	28995098	False	NM_015986,NR_024187	chr17,chr17	-,+	CRLF3,SUZ12P	156730,41527
chr4:123760204-123760686	chr4	+	123760416	123760714	True	NM_007083,NM_002006	chr4,chr4	-,+	NUDT6,FGF2	83099,-12610
chr13:96681259-96682375	chr13	+	96681438	96682388	True	NM_153456,NM_020121	chr13,chr13	+,-	HS6ST3,UGGT2	60704,23398
chr4:169238761-169239583	chr4	+	169238810	169239456	True	NM_017631,NM_001166108	chr4,chr4	-,+	DDX60,PALLD	559,178760
chr15:91568293-91568726	chr15	+	91568574	91568637	True	NM_018668,NM_033544	chr15,chr15	-,+	VPS33B,RCCD1	-2741,-70519
chr2:150184653-150185564	chr2	+	150184685	150185601	True	NM_015702,NM_001195685,NM_194317	chr2,chr2,chr2	-,+,+	MMADHC,LYPD6,LYPD6	258779,897,1427
chr3:126074282-126074544	chr3	+	126074371	126074565	True	NM_182628,NM_014079	chr3,chr3	+,-	CCDC37,KLF15	39216,1721
chr2:97759503-97760351	chr2	+	97759506	97760178	True	NM_199336,NM_001164315	chr2,chr2	-,+	FAHD2B,ANKRD36	454,19054
chr2:97759503-97760351	chr2	-	96676739	96677411	False	NM_207328,NR_003698	chr2,chr2	-,+	GPAT2,LOC729234	23370,-491
chr10:26927608-26928003	chr10	+	26927736	26927877	True	NR_026794,NM_001012750	chr10,chr10	+,-	LOC731789,ABI1	4159,222200
chrX:154312796-154313969	chrX	+	154313362	154314007	True	NM_024332,NM_001018025	chrX,chrX	+,-	BRCC3,MTCP1	-13703,-13815
chr7:32935587-32937043	chr7	+	32936096	32936806	True	NM_015483,NM_007270	chr7,chr7	-,+	KBTBD2,FKBP9	-4628,60198
chr22:26877772-26879466	chr22	+	26877856	26879139	True	NM_001013694,NM_152841,NM_022081	chr22,chr22,chr22	+,-,-	SRRD,HPS4,HPS4	710,-2305,738
chr9:113095682-113096568	chr9	+	113095759	113096590	True	NM_001136562,NM_001003936	chr9,chr9	+,-	AKAP2,TXNDC8	-208039,3591
chr3:47845899-47847616	chr3	+	47846126	47847378	True	NM_003074,NM_014966,NM_138615	chr3,chr3,chr3	-,+,+	SMARCC1,DHX30,DHX30	-22721,-1789,-1789
chr1:25922245-25923093	chr1	+	25922264	25923042	True	NM_020379,NM_138618	chr1,chr1	+,-	MAN1C1,RHCE	20916,-174901
chr5:43105856-43106931	chr5	+	43106019	43106667	True	NM_003432,NR_034127	chr5,chr5	+,-	ZNF131,LOC100132356	14974,-38946
chr2:122496072-122496384	chr2	+	122496072	122496372	True	NM_032390,NM_004622	chr2,chr2	-,+	MKI67IP,TSN	-1569,16748
chr2:43303930-43305808	chr2	+	43303979	43305506	True	NR_027251,NM_006887	chr2,chr2	+,-	LOC100129726,ZFP36L2	148843,148289
chr5:72870070-72870452	chr5	+	72870090	72870312	True	NM_023039,NM_032175	chr5,chr5	-,+	ANKRA2,UTP15	-8579,-8543
chr6:10701400-10703198	chr6	+	10701860	10703011	True	NM_001145020,NR_026736,NR_026737,NM_017906	chr6,chr6,chr6,chr6	-,-,-,+	C6orf52,C6orf52,C6orf52,PAK1IP1	-7021,-6830,-7021,-6735
chr17:79340575-79340862	chr17	+	79340711	79340887	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	32652,-36237
chr10:75251647-75252753	chr10	+	75251814	75252715	True	NM_001142353,NM_021132,NM_004922,NM_001142354	chr10,chr10,chr10,chr10	-,-,+,-	PPP3CB,PPP3CB,SEC24C,PPP3CB	3124,3124,251415,3124
chrX:3630413-3630617	chrX	+	3630417	3630547	True	NM_005044,NM_004042	chrX,chrX	-,+	PRKX,ARSF	1178,-645628
chr17:47211129-47212913	chr17	+	47211357	47212683	True	NM_001159388,NM_031498,NM_001159387,NM_153446	chr17,chr17,chr17,chr17	+,-,+,+	B4GALNT2,GNGT2,B4GALNT2,B4GALNT2	-1586,74119,-1277,-1079
chr17:40722764-40723445	chr17	+	40723003	40723151	True	NM_016556,NM_170607,NM_198204,NM_198205,NM_025233,NM_001042531,NM_001042530,NM_001042532,NM_013290,NM_001042529	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,+,+,+,+,+,+,-,+	PSMC3IP,MLX,MLX,MLX,COASY,COASY,COASY,COASY,PSMC3IP,COASY	6646,-3978,-3978,-3978,-8964,-8964,-8964,-8964,6646,-8964
chr3:141720316-141720995	chr3	+	141720324	141720652	True	NM_001178140,NM_001679	chr3,chr3	-,+	TFDP2,ATP1B3	-1095,-124914
chr5:159611557-159612207	chr5	+	159611603	159611874	True	NM_001130958,NM_001130864	chr5,chr5	+,-	FABP6,PWWP2A	2499,-65151
chr4:15007043-15009028	chr4	+	15007079	15009067	True	NM_001177384,NM_001177381,NM_001177383,NM_001177382,NM_182646,NM_001193534,NM_182485	chr4,chr4,chr4,chr4,chr4,chr4,chr4	+,+,+,+,+,-,+	CPEB2,CPEB2,CPEB2,CPEB2,CPEB2,FBXL5,CPEB2	-2838,-2838,-2838,-2838,-2838,648020,-2838
chr5:25910830-25912163	chr5	+	25911294	25912148	True	NR_037896,NM_020227	chr5,chr5	-,+	LOC340107,PRDM9	-1070602,-2403621
chr19:1246134-1246920	chr19	+	1246273	1246823	True	NM_001001975,NM_152769,NM_001687,NM_177401	chr19,chr19,chr19,chr19	+,-,+,+	ATP5D,C19orf26,ATP5D,MIDN	-4575,-8283,-4575,1728
chr1:179533912-179535000	chr1	+	179533964	179534636	True	NM_001199091,NM_014625	chr1,chr1	+,-	TDRD5,NPHS2	26111,10511
chrX:47518741-47520353	chrX	+	47518814	47520255	True	NM_005229,NR_028119,NM_004182,NR_027444,NM_153477,NM_001114123	chrX,chrX,chrX,chrX,chrX,chrX	-,+,-,+,-,-	ELK1,LOC100133957,UXT,LOC100133957,UXT,ELK1	-8811,-633,-254,-613,-298,-8811
chr7:6534548-6535903	chr7	+	6534876	6535740	True	NM_006854,NM_001134387	chr7,chr7	-,+	KDELR2,ZDHHC4	-11027,81324
chr2:187590693-187591943	chr2	+	187590705	187591995	True	NM_182521,NM_177454	chr2,chr2	-,+	ZSWIM2,FAM171B	121964,-31980
chr5:178368438-178368655	chr5	+	178368437	178368657	True	NM_182594,NM_000843,NM_001178090,NM_001178089	chr5,chr5,chr5,chr5	+,-,+,+	ZNF454,GRM6,ZNF454,ZNF454	-294,53517,-294,-294
chr8:145114685-145115009	chr8	+	145114764	145114998	True	NM_019037,NM_017570	chr8,chr8	+,-	EXOSC4,OPLAH	18523,636
chr1:107598806-107599212	chr1	+	107599007	107599187	True	NM_018137,NM_001079874	chr1,chr1	+,-	PRMT6,VAV3	79,631989
chr6:131977761-131979149	chr6	+	131978005	131978861	True	NM_004830,NM_005021	chr6,chr6	-,+	MED23,ENPP3	-28642,-19615
chr3:96534021-96534308	chr3	+	96534025	96534221	True	NM_001042533,NM_001080448	chr3,chr3	-,+	MINA,EPHA6	1157053,-651
chr6:87865487-87865955	chr6	+	87865524	87865811	True	NM_000735,NM_015021	chr6,chr6	-,+	CGA,ZNF292	-60700,-306
chr11:36318682-36320247	chr11	+	36318785	36319705	True	NM_014186,NM_001101653,NM_001160167	chr11,chr11,chr11	-,-,+	COMMD9,COMMD9,PRR5L	-7786,-7786,-1112
chr20:23587723-23588662	chr20	+	23587737	23588599	True	NM_001008693,NR_001279	chr20,chr20	-,+	CST9,CSTT	-1127,-88005
chr14:92587966-92588273	chr14	+	92588028	92588252	True	NM_004545,NM_017437	chr14,chr14	-,+	NDUFB1,CPSF2	-17,45
chr9:33002119-33003552	chr9	+	33002214	33003329	True	NM_001195254,NR_036577,NM_001195252,NM_175073,NM_001195250,NR_036579,NM_001195251,NM_001195248,NM_001195249,NM_175069,NM_001539,NR_036578,NR_036576	chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,-,-,-,-,-,-,-,-,-,+,-,-	APTX,APTX,APTX,APTX,APTX,APTX,APTX,APTX,APTX,APTX,DNAJA1,APTX,APTX	-604,-575,-575,-575,-575,-640,-575,-575,-640,-575,21879,-604,-575
chr10:101492388-101492988	chr10	+	101492401	101492757	True	NM_015960,NM_078470,NM_004376	chr10,chr10,chr10	+,-,-	CUTC,COX15,COX15	-494,22,22
chr1:150583072-150584983	chr1	+	150583800	150584874	True	NM_207045,NR_036211	chr1,chr1	-,+	ENSA,MIR4257	16785,-59452
chr19:54802846-54803139	chr19	+	54803035	54803121	True	NM_001172654,NM_001013,NM_006865	chr19,chr19,chr19	-,+,-	LILRA3,RPS9,LILRA3	1150,-98360,1194
chrX:69394398-69395911	chrX	+	69394700	69395844	True	NM_002565,NM_198512	chrX,chrX	-,+	P2RY4,DGAT2L6	83868,1491
chr10:49893547-49894093	chr10	+	49893615	49894057	True	NM_020945,NM_021226	chr10,chr10	+,-	WDFY4,ARHGAP22	-149,-80477
chr7:23044860-23046179	chr7	+	23045099	23045805	True	NM_001172428,NM_032581	chr7,chr7	+,-	KLHL7,FAM126A	99547,8021
chr5:121655477-121656591	chr5	+	121655476	121656593	True	NM_005460,NM_002317	chr5,chr5	+,-	SNCAIP,LOX	-7709,-241421
chr3:138739141-138739346	chr3	+	138739140	138739352	True	NM_001040061,NM_001013650	chr3,chr3	+,-	C3orf72,PRR23B	-73115,466
chr2:191997639-191999028	chr2	+	191998068	191998986	True	NM_001130158,NM_003151	chr2,chr2	+,-	MYO1B,STAT4	111120,16989
chr2:43902046-43902585	chr2	+	43902146	43902620	True	NM_001101330,NM_172069	chr2,chr2	-,+	LOC728819,PLEKHH2	891,-37760
chr3:109038651-109040141	chr3	+	109038651	109040052	True	NM_138815,NM_001145553	chr3,chr3	-,+	DPPA2,FLJ25363	-3287,88784
chr15:43026000-43026971	chr15	+	43026021	43026695	True	NM_020759,NM_138477	chr15,chr15	+,-	STARD9,CDAN1	-158216,2772
chr11:64074163-64074699	chr11	+	64074167	64074657	True	NM_004451,NM_001039496,NM_016404	chr11,chr11,chr11	+,+,-	ESRRA,C11orf20,TRMT112	-1174,-6355,10426
chr1:159797057-159797314	chr1	+	159797061	159797361	True	NM_001134233,NM_020125	chr1,chr1	-,+	C1orf204,SLAMF8	27826,-633
chr8:11144029-11145997	chr8	+	11144323	11145927	True	NM_173683,NM_015458	chr8,chr8	-,+	XKR6,MTMR9	-85448,-2375
chr12:123321531-123321956	chr12	+	123321581	123321867	True	NM_003959,NM_024667	chr12,chr12	+,-	HIP1R,VPS37B	-1600,58903
chr2:137772443-137773428	chr2	+	137772706	137773446	True	NM_001080427,NM_003467	chr2,chr2	+,-	THSD7B,CXCR4	-24295,-896981
chr13:111215390-111215841	chr13	+	111215394	111215809	True	NM_017817,NM_018210	chr13,chr13	-,+	RAB20,CARKD	-1323,52198
chr4:76597836-76598251	chr4	+	76597845	76598268	True	NM_203505,NM_203504,NM_012297,NM_003715	chr4,chr4,chr4,chr4	-,-,-,+	G3BP2,G3BP2,G3BP2,USO1	449,449,125,51560
chr3:126271414-126272525	chr3	+	126271687	126272463	True	NM_152533,NM_152889	chr3,chr3	-,+	C3orf22,CHST13	5345,-28562
chr18:9709342-9709576	chr18	+	9709357	9709621	True	NM_006868,NM_005134	chr18,chr18	+,-	RAB31,PPP4R1	-1180,-94757
chr6:151815735-151816052	chr6	+	151815735	151816003	True	NM_025059,NM_017909	chr6,chr6	+,-	C6orf97,RMND1	-611,-42419
chr18:34509200-34509831	chr18	+	34509299	34509880	True	NM_020776,NM_015476	chr18,chr18	+,-	KIAA1328,C18orf10	-100277,-100141
chrX:70123566-70124872	chrX	+	70123570	70124867	True	NM_001003811,NM_001170931,NM_031276	chrX,chrX,chrX	-,+,-	TEX11,FOXO4,TEX11	3750,191131,3750
chr2:172966695-172967046	chr2	+	172966730	172966992	True	NM_178120,NM_004405	chr2,chr2	+,-	DLX1,DLX2	-16573,536
chr10:73719420-73721297	chr10	+	73719616	73721108	True	NM_002778,NM_004273	chr10,chr10	-,+	PSAP,CHST3	-108534,3011
chr15:55880898-55881298	chr15	+	55880971	55881329	True	NM_001198784,NM_015617	chr15,chr15	+,-	FLJ27352,PYGO1	-180299,-65
chr1:231664711-231666323	chr1	+	231664762	231666153	True	NR_028393,NR_028394,NR_028395,NR_028396,NR_028397,NR_028398,NR_028399,NR_033826,NM_005999,NR_028400	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,+,+,-,+,+	TSNAX-DISC1,TSNAX-DISC1,TSNAX-DISC1,TSNAX-DISC1,TSNAX-DISC1,TSNAX-DISC1,TSNAX-DISC1,SNRPD2P2,TSNAX,TSNAX-DISC1	-421,-421,-421,-421,-421,-421,-421,-52491,-421,-421
chr2:88354379-88354844	chr2	+	88354522	88354880	True	NM_016618,NM_198274	chr2,chr2	-,+	KRCC1,SMYD1	418,12418
chr7:44785021-44785560	chr7	+	44785096	44785344	True	NM_138635,NM_031449	chr7,chr7	-,+	H2AFV,ZMIZ2	102431,3185
chr19:52079696-52081007	chr19	+	52079783	52080486	True	NM_007147,NR_034159	chr19,chr19	+,-	ZNF175,FLJ30403	-5303,17204
chr2:48674702-48674943	chr2	+	48674753	48674815	True	NM_152994,NM_000233,NM_001193475,NM_001135629,NR_024188	chr2,chr2,chr2,chr2,chr2	+,-,+,+,+	KLRAQ1,LHCGR,KLRAQ1,KLRAQ1,KLRAQ1	-6896,308115,-6896,-6896,-6896
chr1:156338637-156338899	chr1	+	156338646	156338798	True	NR_036565,NM_020407,NR_026549	chr1,chr1,chr1	-,+,+	CCT3,RHBG,RHBG	-30440,204,204
chr8:95965496-95966381	chr8	+	95965612	95966181	True	NM_152416,NM_001135733,NM_033285	chr8,chr8,chr8	+,-,-	C8orf38,TP53INP1,TP53INP1	71039,-3997,-3997
chrY:14774482-14774717	chrY	+	14774489	14774737	True	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	-242,-241100
chr8:30240642-30241458	chr8	+	30240700	30241089	True	NM_001100916,NM_006867,NM_001008712,NM_001008711,NM_001008710	chr8,chr8,chr8,chr8,chr8	-,+,+,+,+	MBOAT4,RBPMS,RBPMS,RBPMS,RBPMS	-238500,854,854,854,854
chrX:151804756-151805267	chrX	+	151804774	151805313	True	NM_001129826,NM_018558	chrX,chrX	-,+	CSAG3,GABRQ	72407,1323
chr17:11502131-11502459	chr17	+	11502130	11502436	True	NM_144680,NM_001372	chr17,chr17	-,+	ZNF18,DNAH9	398303,-433
chr19:18944396-18946310	chr19	+	18944488	18946077	True	NM_000095,NM_002911	chr19,chr19	-,+	COMP,UPF1	-42374,-1795
chr9:90340583-90340816	chr9	+	90340617	90340793	True	NM_001039803,NM_145918,NM_001912	chr9,chr9,chr9	-,+,+	CDK20,CTSL1,CTSL1	248952,180,180
chr1:150478146-150479899	chr1	+	150478214	150479536	True	NM_004425,NM_001202858,NM_001197320,NM_022664	chr1,chr1,chr1,chr1	+,+,-,+	ECM1,ECM1,MCL1,ECM1	950,950,72728,950
chr13:29071011-29072833	chr13	+	29071232	29072638	True	NM_015932,NM_001159920,NM_001160031,NM_001160030,NM_002019	chr13,chr13,chr13,chr13,chr13	+,-,-,-,-	POMP,FLT1,FLT1,FLT1,FLT1	160502,-1967,-1967,-1967,-1967
chr8:22924784-22925786	chr8	+	22924784	22925832	True	NM_003842,NM_147187,NR_027140,NM_003841	chr8,chr8,chr8,chr8	-,-,-,+	TNFRSF10B,TNFRSF10B,TNFRSF10B,TNFRSF10C	918,918,918,34494
chr19:54874068-54874790	chr19	+	54874068	54874742	True	NM_002287,NM_021706,NM_001005367	chr19,chr19,chr19	-,-,+	LAIR1,LAIR1,TTYH1	2029,2029,51862
chr19:54874068-54874790	chr19	-	55016735	55016785	False	NM_145057,NM_021270,NM_002288	chr19,chr19,chr19	-,+,+	CDC42EP5,LAIR2,LAIR2	-32313,-2773,-2773
chr19:55382812-55384285	chr19	+	55382976	55384087	True	NM_002000,NM_001127255,NM_133279,NM_133278,NM_133269,NM_133274,NM_133277,NM_133271,NM_133273,NM_133272	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+,+,+,+,+	FCAR,NLRP7,FCAR,FCAR,FCAR,FCAR,FCAR,FCAR,FCAR,FCAR	1461,74837,1461,1461,1461,1461,1461,1461,1461,1461
chr15:40233565-40234437	chr15	+	40233835	40234468	True	NM_007223,NM_001013703	chr15,chr15	-,+	GPR176,EIF2AK4	-20742,-7546
chr10:72024102-72025189	chr10	+	72024384	72025216	True	NM_022146,NM_004096	chr10,chr10	-,+	NPFFR1,EIF4EBP2	18284,138644
chr6:138025700-138026162	chr6	+	138025854	138026204	True	NM_175747,NM_006290	chr6,chr6	-,+	OLIG3,TNFAIP3	-210323,162376
chr19:51563250-51563674	chr19	+	51563269	51563483	True	NM_015596,NM_014441	chr19,chr19	-,+	KLK13,SIGLEC9	4934,64653
chr1:170117448-170118688	chr1	+	170117664	170118637	True	NR_036065,NR_036064,NM_001136107	chr1,chr1,chr1	+,-,+	MIR3119-2,MIR3119-1,METTL11B	1881,2023,-2528
chr3:23290481-23291440	chr3	+	23290813	23291493	True	NM_020345,NM_152653	chr3,chr3	-,+	NKIRAS1,UBE2E2	667103,-46092
chr22:22657008-22657549	chr22	+	22657424	22657524	True	NM_080764,NR_027293	chr22,chr22	-,+	ZNF280B,LOC96610	206031,-5015
chr4:81257386-81257779	chr4	+	81257457	81257807	True	NM_001145794,NM_152770	chr4,chr4	-,+	ANTXR2,C4orf22	-262980,-641
chr7:144108267-144108648	chr7	+	144108555	144108667	True	NM_005435,NM_001080413	chr7,chr7	+,-	ARHGEF5,NOBOX	-56127,-7769
chr3:196159196-196159418	chr3	+	196159391	196159467	True	NM_001105573,NM_015562	chr3,chr3	+,-	FBXO45,UBXN7	136257,-46
chr2:87200019-87201684	chr2	+	87200738	87201608	True	NM_001032392,NM_001024457	chr2,chr2	-,+	PLGLB1,RGPD1	47411,-56059
chr2:87200019-87201684	chr2	-	88094954	88095824	False	NM_001078170,NM_001032392	chr2,chr2	-,+	RGPD2,PLGLB1	29520,-47395
chr2:87200019-87201684	chr2	-	107053155	107053205	False	NM_001144013,NR_003506	chr2,chr2	-,+	RGPD3,PLGLA	31646,-50437
chr2:87200019-87201684	chr2	+	108475674	108475724	False	NM_182588,NR_024439	chr2,chr2	+,-	RGPD4,LOC729121	-32337,-33091
chr1:160228363-160229044	chr1	+	160228588	160229028	True	NR_028105,NR_028104,NR_028106,NR_028103,NM_003768,NM_015726	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,+,-	DCAF8,DCAF8,DCAF8,DCAF8,PEA15,DCAF8	3340,3340,3299,3340,-53528,3372
chrX:21776398-21777642	chrX	+	21776398	21777592	True	NM_015884,NM_014332	chrX,chrX	+,-	MBTPS2,SMPX	80063,-168
chr1:15801408-15801941	chr1	+	15801414	15801924	True	NM_015849,NM_001229	chr1,chr1	+,-	CELA2B,CASP9	671,49066
chr16:78057947-78059927	chr16	+	78058229	78059926	True	NM_005752,NM_199355	chr16,chr16	+,-	CLEC3A,ADAMTS18	-1837,-589218
chr9:134582610-134583732	chr9	+	134582617	134583679	True	NM_007171,NM_198679	chr9,chr9	+,-	POMT1,RAPGEF1	-204379,1600
chr19:18210537-18211025	chr19	+	18210604	18210860	True	NM_015016,NM_153701	chr19,chr19	+,-	MAST3,IL12RB1	-2052,-12907
chr17:9478717-9478919	chr17	+	9478717	9478913	True	NM_145054,NR_033656,NM_001080556,NM_004853	chr17,chr17,chr17,chr17	+,-,+,-	WDR16,STX8,WDR16,STX8	1030,412,1030,412
chr20:20346408-20347493	chr20	+	20346460	20347520	True	NM_002196,NM_016652	chr20,chr20	+,-	INSM1,CRNKL1	1244,-309770
chr10:125651788-125652256	chr10	+	125651852	125652294	True	NM_198148,NM_153442	chr10,chr10	-,+	CPXM2,GPR26	-352,-226032
chr5:37250673-37251226	chr5	+	37250816	37251034	True	NM_018034,NM_023073	chr5,chr5	+,-	WDR70,C5orf42	128377,-1286
chr9:80265501-80267357	chr9	+	80265642	80267031	True	NM_004297,NM_033305	chr9,chr9	-,+	GNA14,VPS13A	-2410,-473340
chr13:52436045-52437976	chr13	+	52436045	52437679	True	NR_027048,NM_031290	chr13,chr13	-,+	NCRNA00282,CCDC70	-16759,19
chr4:83483906-83484345	chr4	+	83483941	83484393	True	NM_001080506,NM_021204	chr4,chr4	-,+	TMEM150C,ENOPH1	-815,-132266
chr16:85335877-85336549	chr16	+	85335885	85336497	True	NR_033984,NM_198491	chr16,chr16	+,-	LOC400548,FAM92B	-165180,-189771
chr10:13205193-13206822	chr10	+	13205531	13206783	True	NM_018518,NM_145314,NM_182751	chr10,chr10,chr10	+,-,+	MCM10,UCMA,MCM10	-2040,69595,-2040
chr6:86156557-86156947	chr6	+	86156575	86156990	True	NM_001204813,NM_002526,NM_020468	chr6,chr6,chr6	+,+,-	NT5E,NT5E,SNX14	2311,2311,146696
chr6:45329710-45331706	chr6	+	45329807	45331032	True	NM_003599,NM_001024630	chr6,chr6	-,+	SUPT3H,RUNX2	14593,-33813
chr1:35322264-35322837	chr1	+	35322278	35322815	True	NM_001164824,NM_001164825,NM_138428,NM_002060	chr1,chr1,chr1,chr1	-,-,-,+	C1orf212,C1orf212,C1orf212,GJA4	1893,2585,2664,-63738
chr16:68342877-68343756	chr16	+	68343541	68343719	True	NM_032178,NM_019023,NM_001184824	chr16,chr16,chr16	-,+,+	SLC7A6OS,PRMT7,PRMT7	1199,1157,1157
chr7:27187878-27188544	chr7	+	27187978	27188448	True	NR_002795,NM_024014,NM_006896,NM_019102	chr7,chr7,chr7,chr7	+,-,-,-	HOXA11-AS1,HOXA6,HOXA7,HOXA5	36578,-610,7898,-4691
chr8:19464520-19465893	chr8	+	19464736	19465752	True	NM_001130518,NM_018142	chr8,chr8	-,+	CSGALNACT1,INTS10	-4680,209165
chr2:220282460-220283122	chr2	+	220282498	220282754	True	NM_012100,NM_001927	chr2,chr2	-,+	DNPEP,DES	-29836,344
chr17:39768830-39769114	chr17	+	39768927	39769027	True	NM_005801,NM_005557	chr17,chr17	+,-	EIF1,KRT16	76099,102
chr5:138871817-138873621	chr5	+	138872163	138873535	True	NM_198282,NM_003339	chr5,chr5	-,+	TMEM173,UBE2D2	-9820,67215
chr7:120654326-120655883	chr7	+	120654862	120655871	True	NM_001105533,NM_012338	chr7,chr7	+,-	C7orf58,TSPAN12	-25475,-156685
chr4:135121382-135122257	chr4	+	135121482	135122170	True	NM_032961,NM_001114734	chr4,chr4	+,-	PCDH10,PABPC4L	-1051064,783
chr7:4723757-4724936	chr7	+	4723889	4724853	True	NM_020144,NM_001037165	chr7,chr7	-,+	PAPOLB,FOXK1	176828,-2010
chr2:95832190-95832968	chr2	+	95832228	95832945	True	NM_021088,NM_001017396,NM_032788	chr2,chr2,chr2	+,+,-	ZNF2,ZNF2,ZNF514	-1096,-1096,-6965
chr10:48390750-48392574	chr10	+	48391038	48392512	True	NM_002900,NM_153034	chr10,chr10	-,+	RBP3,ZNF488	-47,-36000
chrY:1522595-1522974	chrY	+	1522595	1522961	True	NR_026711,NM_001173474,NM_001173473,NM_004192	chrY,chrY,chrY,chrY	+,-,-,-	ASMTL-AS1,ASMTL,ASMTL,ASMTL	-53222,-725,36,-725
chrY:1522595-1522974	chrX	+	1572595	1572961	False	NR_026711,NM_001173474,NM_001173473,NM_004192	chrX,chrX,chrX,chrX	+,-,-,-	ASMTL-AS1,ASMTL,ASMTL,ASMTL	-53222,-725,36,-725
chr12:132514488-132514920	chr12	+	132514508	132514965	True	NM_175066,NR_002979	chr12,chr12	-,+	DDX51,SNORA49	113966,803
chr17:4804452-4804740	chr17	+	4804604	4804744	True	NM_000080,NM_001145536	chr17,chr17	-,+	CHRNE,C17orf107	1675,-1707
chr16:1145417-1145923	chr16	+	1145649	1145843	True	NM_207419,NM_001053	chr16,chr16	-,+	C1QTNF8,SSTR5	451,-16919
chr6:125622468-125622673	chr6	+	125622467	125622597	True	NM_016063,NM_001003395	chr6,chr6	-,+	HDDC2,TPD52L1	735,-147100
chr16:741794-743360	chr16	+	742158	742995	True	NM_032259,NM_005861,NM_001005920	chr16,chr16,chr16	-,+,-	WDR24,STUB1,JMJD8	-1758,-12101,-7719
chr10:103988223-103989709	chr10	+	103988228	103989627	True	NM_005029,NM_152310	chr10,chr10	-,+	PITX3,ELOVL3	11654,-2136
chr3:70007100-70007647	chr3	+	70007250	70007672	True	NM_198178,NM_015123	chr3,chr3	+,-	MITF,FRMD4B	-21559,-571820
chr12:56725039-56725784	chr12	+	56725038	56725825	True	NM_001127460,NM_014871,NM_001166279,NM_016584	chr12,chr12,chr12,chr12	-,-,-,+	PAN2,PAN2,PAN2,IL23A	1758,2062,2062,6837
chr5:154099471-154100762	chr5	+	154099866	154100537	True	NM_015315,NR_036094	chr5,chr5	+,-	LARP1,MIR3141	-7455,-124234
chr9:109931581-109932695	chr9	+	109931650	109932670	True	NM_002874,NR_031752	chr9,chr9	+,-	RAD23B,MIR548Q	112873,-82934
chr3:19188808-19189255	chr3	+	19188857	19189299	True	NM_001131010,NM_144633	chr3,chr3	-,+	SATB1,KCNH8	-708592,717
chr8:144779114-144779587	chr8	+	144779186	144779496	True	NR_015445,NM_001162914	chr8,chr8	+,-	BREA2,LOC100130274	48,10833
chr10:116157410-116158482	chr10	+	116157419	116158353	True	NM_198496,NM_032550,NM_001001936	chr10,chr10,chr10	+,-,-	VWA2,AFAP1L2,AFAP1L2	-158452,6218,6218
chr1:12909283-12910832	chr1	+	12909883	12910794	True	NM_001013631,NM_023014,NM_001146181	chr1,chr1,chr1	-,+,-	HNRNPCL1,PRAMEF2,LOC649330	-1305,6146,-1646
chr7:112108712-112109747	chr7	+	112108844	112109792	True	NM_014705,NM_001134468	chr7,chr7	-,+	DOCK4,C7orf53	-262382,11115
chrY:3447834-3448990	chrY	+	3448026	3449033	True	NM_003140,NM_139214	chrY,chrY	-,+	SRY,TGIF2LY	-792234,-952
chrY:3447834-3448990	chrX	+	89177980	89178412	False	NM_138960,NM_004538	chrX,chrX	+,-	TGIF2LX,NAP1L3	-1091,3750329
chr19:3760669-3760953	chr19	+	3760938	3761000	True	NM_004886,NM_172251	chr19,chr19	-,+	APBA3,MRPL54	723,1664
chr12:48154902-48156676	chr12	+	48155237	48156635	True	NM_001098532,NM_001098531,NM_006105,NM_017842	chr12,chr12,chr12,chr12	-,-,-,+	RAPGEF3,RAPGEF3,RAPGEF3,SLC48A1	-3056,-2348,-2993,10331
chr2:96680037-96680573	chr2	+	96680297	96680388	True	NM_207328,NR_003698	chr2,chr2	-,+	GPAT2,LOC729234	20392,-4059
chr3:195259362-195260069	chr3	+	195259365	195259895	True	NR_003265,NM_006241	chr3,chr3	+,-	SDHAP2,PPP1R2	125014,10379
chr6:112408655-112408900	chr6	+	112408724	112408900	True	NM_016262,NM_001033564	chr6,chr6	-,+	TUBE1,C6orf225	1,-101
chr8:41655431-41655708	chr8	+	41655430	41655555	True	NM_000037,NM_178819,NM_020475,NM_020476,NM_020477	chr8,chr8,chr8,chr8,chr8	-,+,-,-,-	ANK1,AGPAT6,ANK1,ANK1,ANK1	-290,-219774,-290,-290,-290
chr19:33714137-33714559	chr19	+	33714249	33714559	True	NM_002333,NM_019849	chr19,chr19	+,-	LRP3,SLC7A10	-28707,2247
chr1:145417130-145418609	chr1	+	145417187	145418268	True	NM_213652,NM_145277,NM_032305,NM_213653,NM_202004	chr1,chr1,chr1,chr1,chr1	+,+,-,+,+	HFE2,HFE2,POLR3GL,HFE2,HFE2	-4054,-4054,52169,-4054,-4054
chr6:42713424-42713770	chr6	+	42713454	42713814	True	NM_003192,NR_037141	chr6,chr6	-,+	TBCC,LOC442211	120,-18191
chr12:57146619-57146888	chr12	+	57146762	57146928	True	NM_000946,NM_003725	chr12,chr12	-,+	PRIM1,HSD17B6	-616,10179
chr3:73045554-73045836	chr3	+	73045572	73045782	True	NM_174907,NM_018130	chr3,chr3	+,-	PPP4R2,SHQ1	336,-147974
chr9:104295767-104296047	chr9	+	104295766	104296046	True	NM_019592,NM_032342	chr9,chr9	+,-	RNF20,C9orf125	86,-46291
chr7:28337608-28338325	chr7	+	28337612	28338368	True	NM_182899,NM_175061	chr7,chr7	+,-	CREB5,JAZF1	571,-117175
chrY:2620253-2620822	chrY	+	2620339	2620799	True	NR_003254,NM_003140	chrY,chrY	+,-	XGPY2,SRY	-53,35045
chrY:2620253-2620822	chrY	-	14618687	14619147	False	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	155150,-85298
chrY:2620253-2620822	chrX	+	2670339	2670799	False	NM_001141919,NM_001141920,NR_003254,NR_037842,NM_175569	chrX,chrX,chrX,chrX,chrX	+,+,+,-,+	XG,XG,XGPY2,NCRNA00102,XG	-297,-297,-53,-136951,-297
chr10:112837917-112838345	chr10	+	112837932	112838394	True	NR_026715,NM_000681	chr10,chr10	-,+	RPL13AP6,ADRA2A	-140919,-1193
chr7:150721137-150721387	chr7	+	150721152	150721272	True	NM_173681,NM_007188	chr7,chr7	-,+	ATG9B,ABCB8	364,4237
chr1:27282186-27282673	chr1	+	27282456	27282644	True	NM_006600,NM_152365	chr1,chr1	+,-	NUDC,C1orf172	-34296,4315
chr14:89017898-89018178	chr14	+	89017996	89018061	True	NM_001160103,NM_007039	chr14,chr14	+,-	ZC3H14,PTPN21	11191,3113
chr6:41055878-41056613	chr6	+	41056189	41056316	True	NM_145063,NR_026938	chr6,chr6	-,+	C6orf130,LOC221442	-16001,12456
chr6:15245504-15245770	chr6	+	15245513	15245617	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	909,417722
chr17:80189454-80189672	chr17	+	80189509	80189669	True	NM_001042423,NM_001042422,NM_004207,NM_198082	chr17,chr17,chr17,chr17	+,+,+,-	SLC16A3,SLC16A3,SLC16A3,CCDC57	474,-3267,-2671,-18820
chr8:100091254-100092043	chr8	+	100091258	100091986	True	NM_152564,NM_006281	chr8,chr8	+,-	VPS13B,STK3	-65815,-253349
chr15:52026302-52027575	chr15	+	52026420	52027541	True	NM_153374,NM_001142885	chr15,chr15	-,+	LYSMD2,TMOD2	2836,16216
chr4:1107774-1108181	chr4	+	1107946	1108226	True	NM_001193318,NR_033768,NM_001131034,NM_021923,NM_194439	chr4,chr4,chr4,chr4,chr4	-,-,-,+,-	RNF212,TMED11P,RNF212,FGFRL1,RNF212	-594,8776,-594,-101745,-594
chr9:14996249-14998248	chr9	+	14996457	14998235	True	NR_003920,NM_144966	chr9,chr9	+,-	LOC389705,FREM1	-3191,-85464
chr2:99548716-99548940	chr2	+	99548737	99548963	True	NM_207362,NM_144706	chr2,chr2	-,+	C2orf55,C2orf15	3771,209221
chr11:2169768-2170284	chr11	+	2169774	2170328	True	NM_001127598,NM_000612,NR_028043,NR_028044,NM_001007139	chr11,chr11,chr11,chr11,chr11	-,-,+,+,-	IGF2,IGF2,IGF2AS,IGF2AS,IGF2	-7433,-9570,-8067,-8067,555
chr7:141263311-141264792	chr7	+	141263364	141264462	True	NM_018238,NM_001080392	chr7,chr7	+,-	AGK,KIAA1147	-12338,137551
chr19:19777726-19777994	chr19	+	19777816	19778002	True	NM_020410,NM_033204	chr19,chr19	-,+	ATP13A1,ZNF101	-3313,1660
chr12:109575319-109575744	chr12	+	109575477	109575593	True	NM_001093,NM_001205180	chr12,chr12	+,-	ACACB,ALKBH2	1608,-44184
chr13:33757089-33757865	chr13	+	33757208	33757902	True	NM_004795,NM_178007	chr13,chr13	+,-	KL,STARD13	-166688,2364
chr6:26506269-26507255	chr6	+	26506524	26507106	True	NM_001732,NM_024639	chr6,chr6	+,-	BTN1A1,ZNF322A	-5080,152907
chr11:77772974-77773494	chr11	+	77772975	77773329	True	NM_001203260,NM_003251	chr11,chr11	-,+	NDUFC2-KCTD14,THRSP	17986,1577
chr1:48307823-48308880	chr1	+	48307877	48308851	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	153761,379505
chr11:58981858-58983796	chr11	+	58982222	58983679	True	NM_001039396,NM_015177	chr11,chr11	-,+	MPEG1,DTX4	-1728,-42462
chr14:55736448-55737627	chr14	+	55736729	55737649	True	NM_017943,NM_014750,NM_152231	chr14,chr14,chr14	+,-,+	FBXO34,DLGAP5,FBXO34	371,-78333,1222
chr2:173291580-173292008	chr2	+	173291624	173291988	True	NR_026995,NM_000210,NM_001079818	chr2,chr2,chr2	-,+,+	LOC91149,ITGA6,ITGA6	308996,325,325
chr6:43445770-43447250	chr6	+	43445793	43447244	True	NM_001146020,NM_206539,NM_080604,NR_027394,NM_001146019,NM_001146018,NM_001146016	chr6,chr6,chr6,chr6,chr6,chr6,chr6	+,-,+,+,+,+,+	TJAP1,DLK2,TJAP1,TJAP1,TJAP1,TJAP1,TJAP1	-583,-22007,-583,-583,-583,-583,-583
chr19:12515396-12516906	chr19	+	12515418	12516720	True	NM_001080821,NM_153358	chr19,chr19	-,+	ZNF799,ZNF791	-3330,205011
chr11:18281820-18282905	chr11	+	18281828	18282916	True	NM_000331,NM_001178006,NM_199161,NM_030754	chr11,chr11,chr11,chr11	+,+,+,-	SAA1,SAA1,SAA1,SAA2	4891,4891,4891,-11607
chr1:11740211-11740414	chr1	+	11740359	11740455	True	NM_198545,NM_006341	chr1,chr1	+,-	C1orf187,MAD2L2	11325,866
chr6:80217907-80219025	chr6	+	80217907	80218885	True	NM_031469,NM_001122769	chr6,chr6	+,-	SH3BGRL2,LCA5	122114,28321
chr16:29466797-29467104	chr16	+	29466845	29467049	True	NM_177552,NR_037608,NR_037609,NM_001017390,NM_001014999,NM_001015000,NM_024044,NM_001031827,NR_002454,NM_001039182,NM_178044	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,+,+,-,+,-,+	SULT1A3,SLX1A-SULT1A3,SLX1B-SULT1A4,SULT1A4,SLX1A,SLX1A,SLX1B,BOLA2,LOC606724,BOLA2B,SLX1B	4157,-484,-484,4157,-1074,-1074,-1074,-560,-6230,-560,-1074
chr16:29466797-29467104	chr16	+	30206187	30206391	False	NM_177552,NR_037608,NR_037609,NM_001017390,NM_001014999,NM_001015000,NM_024044,NM_001031827,NR_002454,NM_001039182,NM_178044	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,+,+,-,+,-,+	SULT1A3,SLX1A-SULT1A3,SLX1B-SULT1A4,SULT1A4,SLX1A,SLX1A,SLX1B,BOLA2,LOC606724,BOLA2B,SLX1B	4157,-484,-484,4157,-1074,-1074,-1074,-560,-6233,-560,-1074
chr10:99162523-99162859	chr10	+	99162529	99162814	True	NM_015179,NM_001145114,NM_002629	chr10,chr10,chr10	-,-,+	RRP12,RRP12,PGAM1	-1402,-1402,23212
chr11:17025595-17026803	chr11	+	17025758	17026800	True	NM_175058,NM_014267	chr11,chr11	-,+	PLEKHA7,C11orf58	9220,-265661
chr9:140198253-140198604	chr9	+	140198269	140198643	True	NM_017723,NM_001004354	chr9,chr9	+,-	C9orf167,NRARP	-26040,-1566
chr1:227915235-227915538	chr1	+	227915236	227915397	True	NR_024485,NR_024486,NM_053052,NM_001161465,NM_023007	chr1,chr1,chr1,chr1,chr1	+,+,+,-,-	LOC100130093,LOC100130093,SNAP47,JMJD4,JMJD4	842,842,7299,7770,7770
chr6:43606455-43608152	chr6	+	43606582	43608152	True	NM_001003690,NM_014628,NM_152732,NM_019096,NM_001193341	chr6,chr6,chr6,chr6,chr6	+,+,+,-,+	MAD2L1BP,MAD2L1BP,RSPH9,GTPBP2,RSPH9	-9354,-3056,4614,-9646,4614
chr11:18007639-18007846	chr11	+	18007654	18007863	True	NM_012139,NM_054031	chr11,chr11	-,+	SERGEF,MRGPRX3	26831,134638
chr1:168262275-168264033	chr1	+	168262414	168263273	True	NR_026844,NM_005149	chr1,chr1	-,+	ANKRD36BP1,TBX19	-45746,-12187
chr1:209405987-209406281	chr1	+	209405993	209406260	True	NM_001104548,NR_036213	chr1,chr1	+,-	LOC642587,MIR4260	195907,390652
chr3:125587057-125588004	chr3	+	125587479	125587835	True	NM_001015050,NR_024250	chr3,chr3	-,+	ALG1L,LOC100125556	68102,47608
chr1:160680185-160680847	chr1	+	160680184	160680793	True	NM_001778,NM_021181	chr1,chr1	-,+	CD48,SLAMF7	842,28283
chr1:236956931-236958394	chr1	+	236957376	236958351	True	NM_018072,NM_000254	chr1,chr1	-,+	HEATR1,MTR	-189535,229
chr1:24438631-24438939	chr1	+	24438633	24438933	True	NM_152372,NR_027087	chr1,chr1	-,+	MYOM3,LOC284632	12,87796
chr17:70115637-70116036	chr17	+	70115638	70116054	True	NM_000346,NR_036488	chr17,chr17	+,-	SOX9,LOC100499467	1106,472939
chr17:77704357-77704770	chr17	+	77704365	77704697	True	NM_178543,NM_020649	chr17,chr17	+,-	ENPP7,CBX8	184,66268
chr11:1243547-1243815	chr11	+	1243569	1243805	True	NM_019009,NM_002458	chr11,chr11	-,+	TOLLIP,MUC5B	87137,489
chr3:61550202-61550485	chr3	+	61550228	61550394	True	NM_002841,NM_002012	chr3,chr3	+,-	PTPRG,FHIT	-3036,-313095
chr20:47665238-47666846	chr20	+	47665296	47666275	True	NM_001037328,NM_001316	chr20,chr20	-,+	STAU1,CSE1L	138686,-2516
chr7:77164967-77166206	chr7	+	77165100	77166115	True	NM_001131008,NM_002835,NM_017439,NM_001131009	chr7,chr7,chr7,chr7	+,+,-,+	PTPN12,PTPN12,PION,PTPN12	1236,657,-119383,1236
chr5:149532518-149532872	chr5	+	149532556	149532848	True	NM_001804,NM_002609	chr5,chr5	+,-	CDX1,PDGFRB	13495,2624
chr17:40897956-40898361	chr17	+	40898090	40898193	True	NM_005854,NM_001991	chr17,chr17	+,-	RAMP2,EZH1	15018,-1019
chr12:26985582-26985888	chr12	+	26985625	26985841	True	NM_002223,NM_001171888	chr12,chr12	-,+	ITPR2,FGFR1OP2	340,105463
chr20:62713800-62714850	chr20	+	62713896	62714820	True	NM_182647,NM_001007125,NM_001039467,NM_001200019,NM_000913,NM_005873	chr20,chr20,chr20,chr20,chr20,chr20	+,-,-,+,+,-	OPRL1,C20orf201,RGS19,OPRL1,OPRL1,RGS19	-2476,942,-2572,1548,-2476,-3051
chr3:180706718-180707350	chr3	+	180706845	180707309	True	NM_001190233,NM_005087,NR_033725,NR_033724,NM_145261,NR_033721,NR_033723,NR_033722	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-,-,-	DNAJC19,FXR1,DNAJC19,DNAJC19,DNAJC19,DNAJC19,DNAJC19,DNAJC19	47,-76666,303,303,303,303,303,303
chr6:146370373-146371240	chr6	+	146370379	146371284	True	NM_001114329,NM_173082	chr6,chr6	+,-	GRM1,SHPRH	-21657,-85146
chr3:170746621-170747912	chr3	+	170746670	170747727	True	NM_000340,NM_001185056	chr3,chr3	-,+	SLC2A2,CLDN11	-1902,-607701
chr22:31610096-31611320	chr22	+	31610099	31611335	True	NR_037496,NM_005569	chr22,chr22	-,+	MIR3928,LIMK2	-53994,-1907
chr1:225649952-225650349	chr1	+	225650074	225650352	True	NM_194442,NM_001130440	chr1,chr1	-,+	LBR,SRP9	-33517,315162
chr9:130693711-130694019	chr9	+	130693721	130694067	True	NM_001135219,NM_001018078,NM_173492,NM_003863	chr9,chr9,chr9,chr9	-,+,-,-	PIP5KL1,FPGS,PIP5KL1,DPM2	-645,-128264,-3951,6746
chr4:48486838-48487134	chr4	+	48486879	48487163	True	NM_175619,NM_152679,NM_003215	chr4,chr4,chr4	+,+,-	ZAR1,SLC10A4,TEC	5145,-1572,-215065
chr16:27900097-27901438	chr16	+	27900580	27901324	True	NM_015202,NM_144675	chr16,chr16	+,-	KIAA0556,GSG1L	-339170,-1102
chr19:2014508-2014761	chr19	+	2014716	2014800	True	NM_001319,NM_017797	chr19,chr19	+,-	CSNK1G2,BTBD2	-73606,952
chr3:75829646-75830758	chr3	+	75830049	75830722	True	NR_036235,NM_001128223	chr3,chr3	+,-	MIR4273,ZNF717	-42672,3587
chr17:26646431-26646667	chr17	+	26646520	26646706	True	NM_014573,NR_028334	chr17,chr17	+,-	TMEM97,FLJ40504	-450,-12112
chr9:107298549-107300268	chr9	+	107298625	107300315	True	NM_001004483,NM_001004485,NM_001001961,NM_001001919	chr9,chr9,chr9,chr9	+,+,-,-	OR13C8,OR13F1,OR13C3,OR13C4	31133,-32132,3,-9135
chr13:73676660-73678298	chr13	+	73676828	73677945	True	NM_001730,NM_014953	chr13,chr13	+,-	KLF5,DIS3	-43743,-320484
chr10:105680866-105681578	chr10	+	105680942	105681602	True	NM_024928,NM_014720	chr10,chr10	-,+	OBFC1,SLK	-2897,45867
chr16:5006248-5007277	chr16	+	5006286	5006923	True	NM_014692,NM_002705	chr16,chr16	+,-	SEC14L5,PPL	1394,-19150
chr6:27725414-27725779	chr6	+	27725466	27725649	True	NM_003509,NM_003519	chr6,chr6	+,-	HIST1H2AI,HIST1H2BL	50327,50117
chr1:146067949-146068474	chr1	+	146068383	146068445	True	NM_001101663,NM_001097616	chr1,chr1	-,+	NBPF24,GPR89C	-138,-184566
chr1:146067949-146068474	chr1	+	147610219	147610281	False	NM_001101663,NM_001097616	chr1,chr1	-,+	NBPF24,GPR89C	-138,-184703
chr3:111716438-111717002	chr3	+	111716479	111716931	True	NM_013259,NM_001190259,NM_001008272,NM_001008273	chr3,chr3,chr3,chr3	+,-,+,+	TAGLN3,GCET2,TAGLN3,TAGLN3	654,135271,654,1075
chr14:104393343-104394009	chr14	+	104393533	104393786	True	NM_001127393,NM_153046,NM_004894	chr14,chr14,chr14	-,+,-	C14orf2,TDRD9,C14orf2	-5630,1030,-5630
chr1:160678634-160680185	chr1	+	160678911	160680216	True	NM_001778,NM_021181	chr1,chr1	-,+	CD48,SLAMF7	1419,28860
chr3:197678071-197678314	chr3	+	197678139	197678234	True	NR_026787,NR_026786,NM_001134435,NM_032263,NM_000996,NM_001136049,NM_033029	chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,-,-,+,+,+	LMLN,LMLN,IQCG,IQCG,RPL35A,LMLN,LMLN	8836,8836,-1343,8707,-1149,8836,8836
chr6:36921497-36922664	chr6	+	36921522	36922679	True	NM_014341,NM_001199159,NM_153370	chr6,chr6,chr6	-,+,+	MTCH1,PI16,PI16	31320,-5534,-98
chr2:36824292-36824877	chr2	+	36824319	36824785	True	NM_001177972,NM_005102,NM_001042548	chr2,chr2,chr2	+,-,-	VIT,FEZ2,FEZ2	99047,597,597
chr2:74209522-74210722	chr2	+	74209821	74210751	True	NM_080918,NM_001035505	chr2,chr2	+,-	DGUOK,BOLA3	-55919,164338
chr11:67395048-67395516	chr11	+	67395116	67395450	True	NM_007103,NM_181843	chr11,chr11	+,-	NDUFV1,NUDT8	-20844,2001
chr12:93768561-93769854	chr12	+	93768913	93769411	True	NM_003348,NM_199040,NM_019094,NR_002212	chr12,chr12,chr12,chr12	-,+,+,+	UBE2N,NUDT4,NUDT4,NUDT4P1	66665,2289,2289,2334
chr12:9438362-9438690	chr12	+	9438464	9438676	True	NR_036263,NR_024374	chr12,chr12	-,+	MIR1244-3,LOC642846	-46317,-2262
chr12:9438362-9438690	chr12	-	9598393	9598457	False	NR_033399,NR_024374	chr12,chr12	-,+	DDX12,LOC642846	2361,-162191
chr12:9438362-9438690	chr12	+	31229143	31229207	False	NM_004399,NM_001135811,NM_030653,NM_152438	chr12,chr12,chr12,chr12	+,-,+,+	DDX11,FAM60A,DDX11,DDX11	-2415,249964,-2415,-2415
chr1:187335306-187336235	chr1	+	187335489	187336288	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-685930,-537523
chr7:2596163-2597604	chr7	+	2596249	2597089	True	NM_001100390,NM_152558,NM_152743	chr7,chr7,chr7	+,+,-	IQCE,IQCE,BRAT1	1542,1542,-857
chr2:42276280-42276997	chr2	+	42276322	42276971	True	NM_138370,NM_004718	chr2,chr2	+,-	PKDCC,COX7A2L	-1219,311436
chr6:52151148-52152819	chr6	+	52151148	52152729	True	NM_133367,NM_002388	chr6,chr6	+,-	PAQR8,MCM3	74196,-1566
chr7:91765660-91766349	chr7	+	91765868	91766317	True	NM_001146152,NM_000786,NM_019004	chr7,chr7,chr7	-,-,+	CYP51A1,CYP51A1,ANKIB1	-1809,-2028,109230
chr3:130770270-130771862	chr3	+	130770403	130771911	True	NM_014065,NM_024800	chr3,chr3	-,+	ASTE1,NEK11	-24757,-24767
chr1:201476406-201476812	chr1	+	201476523	201476857	True	NM_001193570,NM_001193571,NR_026667,NM_004078	chr1,chr1,chr1,chr1	-,-,+,-	CSRP1,CSRP1,RPS10P7,CSRP1	-136,-556,12174,-136
chr6:31973861-31974165	chr6_dbb_hap3	+	3259620	3259790	False	NR_001284,NM_001128590,NM_032454,NM_032470,NM_007293,NM_001002029,NM_000500,NM_004197	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	-,+,+,-,+,+,+,+	TNXA,CYP21A2,STK19,TNXB,C4A,C4B,CYP21A2,STK19	6643,-729,7310,6893,8364,8364,-729,7310
chr6:31973861-31974165	chr6	+	31974037	31974207	True	NR_001284,NM_001128590,NM_032454,NM_032470,NM_007293,NM_001002029,NM_000500,NM_004197	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,+,+,-,+,+,+,+	TNXA,CYP21A2,STK19,TNXB,C4A,C4B,CYP21A2,STK19	6643,-729,7310,6893,8364,8364,-729,7310
chr6:31973861-31974165	chr6_ssto_hap7	+	3306747	3306917	False	NR_001284,NM_001128590,NM_032454,NM_032470,NM_007293,NM_001002029,NM_000500,NM_004197	chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7	-,+,+,-,+,+,+,+	TNXA,CYP21A2,STK19,TNXB,C4A,C4B,CYP21A2,STK19	6643,-47,7310,6893,8364,8364,-47,7310
chr7:92462895-92463310	chr7	+	92462919	92463191	True	NM_001259,NR_026902,NM_001145306	chr7,chr7,chr7	-,+,-	CDK6,MGC16142,CDK6	90,-295181,2800
chr9:32946958-32948277	chr9	+	32946979	32948283	True	NM_001539,NM_001195249	chr9,chr9	+,-	DNAJA1,APTX	76925,53341
chr17:61819224-61820009	chr17	+	61819481	61819910	True	NM_001003788,NM_153335,NM_007372,NM_001165969,NM_001165970,NM_001003787,NM_001003786	chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,-,-,-,-	STRADA,STRADA,DDX42,STRADA,STRADA,STRADA,STRADA	-151,-151,31656,-151,-151,-151,-151
chr5:6378678-6379089	chr5	+	6378851	6379127	True	NM_001145161,NM_032286	chr5,chr5	+,-	UBE2QL1,MED10	69608,-212
chr4:2044311-2044578	chr4	+	2044458	2044538	True	NM_001168243,NM_001141936,NM_005663	chr4,chr4,chr4	+,+,-	C4orf48,C4orf48,WHSC2	-789,-732,-33499
chr16:56690663-56691242	chr16	+	56690685	56690990	True	NM_005947,NM_005949,NM_005950	chr16,chr16,chr16	+,+,-	MT1B,MT1F,MT1G	-4926,864,11046
chr9:32010457-32011397	chr9	+	32010793	32011421	True	NM_014314,NM_002197	chr9,chr9	-,+	DDX58,ACO1	514951,373179
chr5:149829857-149830795	chr5	+	149829928	149830454	True	NM_001025071,NM_001025070,NM_005617,NM_001543	chr5,chr5,chr5,chr5	-,-,-,+	RPS14,RPS14,RPS14,NDST1	-609,-609,-609,57219
chr12:132852880-132853113	chr12	+	132852895	132853147	True	NM_001122636,NR_024563	chr12,chr12	-,+	GALNT9,LOC100130238	52808,-969
chr16:30006654-30006868	chr16	+	30006730	30006910	True	NM_003609,NM_173618	chr16,chr16	-,+	HIRIP3,INO80E	552,620
chr12:2157028-2158453	chr12	+	2157093	2158363	True	NM_001129834,NM_001129835,NM_001129836,NM_001129837,NM_001129830,NM_001129831,NM_001129832,NM_001129833,NM_001129838,NM_001129839,NM_199460,NM_001129841,NM_001129840,NM_001129843,NM_001129842,NM_001129844,NM_001129846,NM_001129827,NM_152640,NM_001129829,NM_000719,NM_001167623,NM_001167625,NM_001167624	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,-,+,+,+,+,+	CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,DCP1B,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C	4052,4052,4052,4052,4052,4052,4052,4052,4052,4052,4052,4052,4052,4052,4052,4052,4052,4052,-43416,4052,4052,4052,4052,4052
chr15:44065818-44067518	chr15	+	44066367	44067527	True	NM_001199877,NM_025165	chr15,chr15	+,-	SERF2,ELL3	1766,2025
chr1:2407507-2407847	chr1	+	2407510	2407808	True	NM_014638,NM_018216	chr1,chr1	+,-	PLCH2,PANK4	-43,50277
chr5:132199859-132200514	chr5	+	132199872	132200540	True	NM_014402,NM_052971,NM_005260	chr5,chr5,chr5	+,+,-	UQCRQ,LEAP2,GDF9	1778,8817,-1
chr2:135609171-135610229	chr2	+	135609566	135610228	True	NM_138326,NR_036549	chr2,chr2	+,-	ACMSD,LOC100129961	-13439,65998
chr9:100880735-100881325	chr9	+	100880807	100881137	True	NM_018946,NM_014788,NM_033219,NM_033220	chr9,chr9,chr9,chr9	+,-,-,-	NANS,TRIM14,TRIM14,TRIM14	-61899,393,393,401
chr9:97022493-97022708	chr9	+	97022625	97022685	True	NM_194320,NM_017561	chr9,chr9	+,-	ZNF169,FAM22F	-1098,68291
chr16:84535604-84536331	chr16	+	84535788	84536202	True	NM_014861,NM_020947	chr16,chr16	+,-	ATP2C2,KIAA1609	-133706,2136
chr4:113739360-113739830	chr4	+	113739399	113739829	True	NR_029857,NM_001127493	chr4,chr4	-,+	MIR302B,ANK2	-169686,-211
chr19:36390625-36390868	chr19	+	36390674	36390886	True	NM_001007469,NM_003332,NM_001173514,NM_001173515,NR_033390,NM_198125,NM_139239,NM_014266	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,-,-,-,-,-,+	HCST,TYROBP,TYROBP,TYROBP,TYROBP,TYROBP,NFKBID,HCST	2495,8375,8375,8375,8375,8375,716,2495
chr20:23332010-23333976	chr20	+	23332118	23333904	True	NM_013248,NM_022080	chr20,chr20	+,-	NXT1,NAPB	-796,68303
chr2:128051740-128052463	chr2	+	128051752	128051960	True	NM_000122,NM_000312	chr2,chr2	-,+	ERCC3,PROC	0,124035
chrX:36982553-36983886	chrX	+	36983099	36983791	True	NM_006520,NM_001013736	chrX,chrX	-,+	DYNLT3,FAM47C	723165,42640
chr11:34952219-34953748	chr11	+	34952270	34953782	True	NM_015957,NM_003477	chr11,chr11	-,+	APIP,PDHX	-14331,-14644
chr19:3186600-3186887	chr19	+	3186655	3186769	True	NM_003775,NM_198969,NM_020170	chr19,chr19,chr19	+,-,+	S1PR4,AES,NCLN	-7970,-123691,-831
chr22:21056689-21057068	chr22	+	21056812	21056916	True	NM_002650,NR_026815	chr22,chr22	-,+	PI4KA,TMEM191A	32089,-1461
chr22:21056689-21057068	chr22	+	20378364	20378414	False	NR_003563,NR_026919	chr22,chr22	-,+	PI4KAP1,LOC150197	20331,-184560
chr22:21056689-21057068	chr22	+	21822121	21822171	False	NM_015094,NR_003700	chr22,chr22	+,-	HIC2,PI4KAP2	-50479,49659
chr18:3412162-3412711	chr18	+	3412211	3412757	True	NM_019856,NM_174886	chr18,chr18	-,+	MYOM1,TGIF1	-192105,-190
chr1:201796334-201797290	chr1	+	201796417	201796985	True	NM_012134,NM_018085	chr1,chr1	-,+	LMOD1,IPO9	118781,1302
chr17:64221849-64223159	chr17	+	64222103	64222479	True	NM_002737,NM_000042	chr17,chr17	+,-	PRKCA,APOH	76446,3132
chr9:4117858-4118063	chr9	+	4117884	4117984	True	NR_026663,NM_152629	chr9,chr9	+,-	C9orf70,GLIS3	-219289,34249
chr1:11022222-11023165	chr1	+	11022712	11022891	True	NM_007375,NM_001170754	chr1,chr1	+,-	TARDBP,C1orf127	49787,19254
chr4:72052524-72052810	chr4	+	72052551	72052853	True	NM_001098484,NM_002092,NM_001134742	chr4,chr4,chr4	+,-,+	SLC4A4,GRSF1,SLC4A4	149,-346924,149
chr5:82768530-82768741	chr5	+	82768641	82768747	True	NM_001126336,NM_004385,NM_001164097,NM_001884,NM_001164098	chr5,chr5,chr5,chr5,chr5	+,+,+,-,+	VCAN,VCAN,VCAN,HAPLN1,VCAN	-1199,-1199,-1199,248199,-1199
chr13:19980450-19980766	chr13	+	19980716	19980802	True	NR_034026,NR_027248	chr13,chr13	+,-	LOC100287114,ANKRD26P3	-61578,-61603
chr7:5599554-5600539	chr7	+	5599627	5600502	True	NM_001101,NM_003088	chr7,chr7	-,+	ACTB,FSCN1	-29395,31951
chr3:50645351-50645709	chr3	+	50645375	50645677	True	NM_013324,NM_145071,NM_004635	chr3,chr3,chr3	-,-,+	CISH,CISH,MAPKAPK3	3635,3635,8923
chr7:6631055-6631258	chr7	+	6631209	6631306	True	NM_024067,NM_001145118	chr7,chr7	+,-	C7orf26,GRID2IP	-1350,-40142
chr4:141182980-141183541	chr4	+	141183042	141183578	True	NM_018717,NM_032547	chr4,chr4	-,+	MAML3,SCOC	-107809,-4653
chr4:49296993-49297239	chr4	+	49297021	49297251	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-308807,-388206
chr17:34059024-34059244	chr17	+	34059089	34059269	True	NM_033315,NM_139285	chr17,chr17	+,-	RASL10B,GAS2L2	-461,20678
chr18:74729062-74729272	chr18	+	74729137	74729289	True	NM_007345,NM_002385,NM_001025081,NM_001025090,NM_001025092	chr18,chr18,chr18,chr18,chr18	+,-,-,-,-	ZNF236,MBP,MBP,MBP,MBP	-193072,-82,-82,-82,-82
chr20:43990264-43991097	chr20	+	43990432	43990979	True	NM_033542,NR_003189,NM_001099791,NM_002999,NM_001197129	chr20,chr20,chr20,chr20,chr20	+,+,+,-,+	SYS1,SYS1-DBNDD2,SYS1,SDC4,SYS1	760,829,760,-13368,87
chr16:70568892-70570161	chr16	+	70568894	70569895	True	NR_003696,NM_015386,NR_003079,NR_037420	chr16,chr16,chr16,chr16	+,-,+,+	SNORD111B,COG4,SNORD111,MIR3647	-5542,-11437,2012,-5545
chr5:68513957-68514192	chr5	+	68513968	68514158	True	NM_033281,NM_176816	chr5,chr5	+,-	MRPS36,CCDC125	-446,102302
chr22:39051881-39052152	chr22	+	39051886	39052156	True	NM_001002880,NM_001013647,NM_015373	chr22,chr22,chr22	+,-,+	CBY1,LOC646851,CBY1	501,528,501
chr16:69366175-69367016	chr16	+	69366434	69367043	True	NM_022341,NM_001199434,NM_016101,NM_032382	chr16,chr16,chr16,chr16	-,+,+,-	PDF,NIP7,NIP7,COG8	-1936,6371,6371,6536
chr9:140137134-140137452	chr9	+	140137149	140137325	True	NM_001004353,NM_006088,NM_001001710	chr9,chr9,chr9	+,+,-	C9orf173,TUBB2C,FAM166A	8404,-1489,4947
chr8:67835851-67836581	chr8	+	67836177	67836511	True	NR_002598,NR_002599,NM_001136160	chr8,chr8,chr8	-,-,+	SNORD87,SNHG6,C8orf45	-1393,1330,-52495
chr5:894377-896233	chr5	+	894466	895782	True	NM_004237,NR_027633,NM_001009877,NM_023924,NM_001166260	chr5,chr5,chr5,chr5,chr5	+,-,-,-,+	TRIP13,BRD9,BRD9,BRD9,TRIP13	-1551,-1527,-1792,-1527,-1551
chr11:35683580-35683973	chr11	+	35683580	35683992	True	NM_015430,NM_017583	chr11,chr11	-,+	PAMR1,TRIM44	-136404,360
chr20:30460664-30461316	chr20	+	30460668	30461129	True	NM_001012644,NM_177991,NM_001008409,NM_080611	chr20,chr20,chr20,chr20	-,-,+,-	DUSP15,DUSP15,TTLL9,DUSP15	-2867,-2657,-2214,-2189
chr20:31618182-31618486	chr20	+	31618209	31618505	True	NM_080675,NM_174897	chr20,chr20	-,+	SUN5,BPIL3	-25970,948
chr1:155240723-155242435	chr1	+	155240922	155242360	True	NM_052837,NM_003993,NM_020897,NM_005698	chr1,chr1,chr1,chr1	-,-,+,-	SCAMP3,CLK2,HCN3,SCAMP3	-8727,973,5013,-8727
chr19:54588256-54588760	chr19	+	54588432	54588616	True	NM_004542,NM_001135686	chr19,chr19	+,-	NDUFA3,TARM1	17543,-3798
chrX:95936720-95938194	chrX	+	95937039	95938181	True	NM_007309,NR_003539,NM_006729	chrX,chrX,chrX	+,-,+	DIAPH2,LOC643486,DIAPH2	1480,-344138,1480
chr12:1804272-1805692	chr12	+	1805186	1805478	True	NM_024551,NR_037422	chr12,chr12	+,-	ADIPOR2,MIR3649	-4990,-35640
chr19:17415048-17416358	chr19	+	17415174	17416162	True	NM_024050,NM_024527,NM_023937	chr19,chr19,chr19	+,-,+	DDA1,ABHD8,MRPL34	4174,-892,314
chr1:150266507-150267038	chr1	+	150266548	150266912	True	NM_018997,NM_016022,NM_031901	chr1,chr1,chr1	+,-,+	MRPS21,APH1A,MRPS21	-333,-25016,-333
chr12:4228173-4228900	chr12	+	4228250	4228926	True	NM_001759,NM_020367	chr12,chr12	+,-	CCND2,PARP11	153975,-245642
chr6:135504131-135504601	chr6	+	135504374	135504618	True	NM_001161658,NM_001161659,NM_001161660,NM_001130173,NM_001130172,NM_001161656,NM_001161657,NM_001145207,NM_005375	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	+,+,+,+,+,+,+,-,+	MYB,MYB,MYB,MYB,MYB,MYB,MYB,HBS1L,MYB	-1972,-1972,-1972,-1972,-1972,-1972,-1972,-128338,-1972
chr22:38434481-38434764	chr22	+	38434489	38434731	True	NM_013356,NM_001039583	chr22,chr22	-,+	SLC16A8,PICK1	44489,18530
chr1:95699724-95699984	chr1	+	95699786	95700032	True	NR_037643,NM_001199682,NM_015485,NM_001128142,NM_144988	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	RWDD3,RWDD3,RWDD3,RWDD3,ALG14	-126,-126,-126,-126,-161279
chr11:70047997-70048496	chr11	+	70048178	70048382	True	NM_003824,NM_005247	chr11,chr11	+,-	FADD,FGF3	886,-413986
chr9:130678166-130678366	chr9	+	130678179	130678337	True	NM_175039,NM_001018078,NM_175040	chr9,chr9,chr9	-,+,-	ST6GALNAC4,FPGS,ST6GALNAC4	1018,-112722,1018
chr12:27864383-27864880	chr12	+	27864408	27864898	True	NM_021821,NM_001146221,NM_001190864	chr12,chr12,chr12	+,-,+	MRPS35,LOC100287284,MRPS35	-753,59361,-753
chr16:121635-121843	chr16	+	121639	121825	True	NM_022450,NM_001015052,NM_002434,NM_001015054	chr16,chr16,chr16,chr16	-,+,+,+	RHBDF1,MPG,MPG,MPG	854,6343,6343,5192
chr1:90459328-90460398	chr1	+	90459342	90460433	True	NM_182976,NM_182975,NR_002830	chr1,chr1,chr1	+,+,-	ZNF326,ZNF326,GEMIN8P4	244,244,142
chr4:69427085-69427567	chr4	+	69427151	69427604	True	NM_014058,NM_001077,NM_001076	chr4,chr4,chr4	+,-,-	TMPRSS11E,UGT2B17,UGT2B15	-114048,6700,6695
chr11:63931537-63931781	chr11	+	63931536	63931734	True	NM_006819,NM_014067	chr11,chr11	+,-	STIP1,MACROD1	21852,1901
chr7:74988436-74988692	chr7	+	74988481	74988701	True	NR_003614,NM_001002840,NM_018991	chr7,chr7,chr7	-,+,+	PMS2L2,STAG3L1,STAG3L1	-266,-85,-85
chr7:74988436-74988692	chr7	-	74306527	74306577	False	NR_027777,NR_027776,NM_001025202,NR_027775	chr7,chr7,chr7,chr7	+,+,-,+	PMS2P5,PMS2P5,STAG3L2,PMS2P5	316,316,204,316
chr7:74988436-74988692	chr7	-	72476192	72476413	False	NM_001013739,NR_003614	chr7,chr7	-,+	STAG3L3,PMS2L2	92,266
chr17:16592600-16592904	chr17	+	16592801	16592893	True	NM_020787,NM_014695	chr17,chr17	-,+	ZNF624,CCDC144A	-35634,745
chr17:16592600-16592904	chr17	+	20223727	20223781	False	NM_001042685,NR_023380	chr17,chr17	-,+	LGALS9B,CCDC144C	147117,705
chr2:106016309-106017390	chr2	+	106016445	106017404	True	NM_001450,NM_201555,NM_001039492,NM_024093	chr2,chr2,chr2,chr2	-,-,-,+	FHL2,FHL2,FHL2,C2orf49	-764,-764,-870,-62483
chr22:29701830-29702295	chr22	+	29701933	29702207	True	NM_006478,NM_152236,NM_152237,NM_001007279,NM_006477	chr22,chr22,chr22,chr22,chr22	+,+,+,-,-	GAS2L1,GAS2L1,GAS2L1,RASL10A,RASL10A	789,789,789,9591,9591
chr10:17688301-17689479	chr10	+	17688384	17689495	True	NM_003473,NM_014241,NR_037774	chr10,chr10,chr10	+,-,+	STAM,PTPLA,STAM	-2312,-29011,-2312
chrX:132350200-132351175	chrX	+	132350209	132351210	True	NM_001101357,NM_016521	chrX,chrX	+,-	CCDC160,TFDP3	1019866,1216
chr3:40499438-40501066	chr3	+	40499543	40501021	True	NR_033965,NM_001034996,NM_003973	chr3,chr3,chr3	-,+,+	FLJ33065,RPL14,RPL14	-148354,-771,-800
chr16:27279920-27280170	chr16	+	27280036	27280192	True	NM_145080,NR_037184	chr16,chr16	-,+	NSMCE1,FLJ21408	-7,-561
chr10:127349852-127350137	chr10	+	127349911	127350111	True	NR_033848,NM_001128202	chr10,chr10	+,-	LOC283038,C10orf122	21700,21652
chr5:64857927-64858815	chr5	+	64858030	64858814	True	NM_015342,NM_022145	chr5,chr5	+,-	PPWD1,CENPK	316,231
chr20:36935018-36935304	chr20	+	36935018	36935280	True	NM_001725,NM_001029864	chr20,chr20	+,-	BPI,KIAA1755	-2517,-45844
chr12:121453828-121454131	chr12	+	121453884	121454166	True	NM_022895,NM_000545	chr12,chr12	-,+	C12orf43,HNF1A	184,-37386
chr19:2326895-2327214	chr19	+	2326949	2327249	True	NM_152988,NM_001077238,NM_016199	chr19,chr19,chr19	+,+,-	SPPL2B,SPPL2B,LSM7	1379,1379,1415
chrX:22050662-22051260	chrX	+	22050799	22051245	True	NM_014332,NM_000444	chrX,chrX	-,+	SMPX,PHEX	-274569,71
chr10:29702246-29703977	chr10	+	29702621	29703991	True	NR_030335,NR_003930	chr10,chr10	-,+	MIR604,LOC387647	130099,-4179
chr15:65369423-65369652	chr15	+	65369430	65369564	True	NM_001101362,NM_016563	chr15,chr15	+,-	KBTBD13,RASL12	-327,-9042
chr1:228194151-228194367	chr1	+	228194346	228194406	True	NM_033131,NM_003395	chr1,chr1	+,-	WNT3A,WNT9A	316,-58670
chr4:40198869-40199542	chr4	+	40198880	40199594	True	NM_004310,NR_027277	chr4,chr4	+,-	RHOH,LOC344967	-412,-140061
chr14:20022476-20022933	chr22	+	16290275	16290453	False	NR_001591,NM_001136213	chr22,chr22	+,-	psiTPTE22,POTEH	792347,-2338
chr14:20022476-20022933	chr14	+	20022570	20022968	True	NM_001145442,NM_172194	chr14,chr14	-,+	POTEM,OR4Q3	-2298,192618
chr14:20022476-20022933	chr14	-	19550878	19551056	False	NM_001145442,NR_027480,NM_001005356	chr14,chr14,chr14	-,+,+	POTEM,POTEG,POTEG	469266,2308,2308
chr16:1966925-1967406	chr16	+	1966975	1967447	True	NM_001009606,NM_004548	chr16,chr16	-,+	HS3ST6,NDUFB10	834,42069
chr2:234294209-234295614	chr2	+	234294417	234295500	True	NM_003648,NM_018218	chr2,chr2	+,-	DGKD,USP40	1299,178786
chr22:23973720-23974814	chr22	+	23973791	23974807	True	NM_153615,NM_016449	chr22,chr22	+,-	RGL4,C22orf43	58240,-13
chr1:158222809-158223057	chr1	+	158223003	158223108	True	NM_001763,NM_001764	chr1,chr1	+,-	CD1A,CD1B	818,78268
chr8:82397710-82398465	chr8	+	82398157	82398516	True	NM_001444,NM_001442	chr8,chr8	+,-	FABP5,FABP4	-205499,-2684
chr7:121534618-121535804	chr7	+	121534747	121535819	True	NM_002851,NM_005763	chr7,chr7	+,-	PTPRZ1,AASS	-21648,248580
chr8:30670412-30671551	chr8	+	30670513	30671345	True	NM_001009552,NM_005671	chr8,chr8	-,+	PPP2CB,UBXN8	-161,-68874
chr6:154824528-154825411	chr6	+	154824855	154825409	True	NM_173515,NM_014892	chr6,chr6	-,+	CNKSR3,SCAF8	6394,229102
chr20:35973278-35974305	chr20	+	35973344	35974200	True	NM_198291,NM_021081,NM_005417	chr20,chr20,chr20	+,-,+	SRC,GHRH,SRC	356,-88045,-307
chr11:119251196-119251678	chr11	+	119251243	119251707	True	NM_004205,NR_034160	chr11,chr11	-,+	USP2,LOC100499227	779,780
chr16:31723799-31724542	chr16	+	31723835	31724544	True	NR_027011,NM_001130913	chr16,chr16	-,+	CSDAP1,ZNF720	-142990,5
chr2:150443907-150444210	chr2	+	150443929	150444147	True	NM_015702,NM_194317	chr2,chr2	-,+	MMADHC,LYPD6	233,-256951
chr17:34085633-34086642	chr17	+	34085760	34086385	True	NM_145272,NM_139285	chr17,chr17	+,-	C17orf50,GAS2L2	1530,-5863
chr6:52857618-52858961	chr6	+	52857980	52858986	True	NM_001512,NM_033481	chr6,chr6	-,+	GSTA4,FBXO9	1242,70809
chr7:23052584-23053041	chr7	+	23052628	23053085	True	NM_001172428,NM_032581	chr7,chr7	+,-	KLHL7,FAM126A	92267,735
chr3:128777270-128778340	chr3	+	128777296	128778143	True	NM_001204886,NM_000174	chr3,chr3	-,+	RAB43,GP9	62561,1501
chr16:333441-333645	chr16	+	333573	333663	True	NM_183337,NM_006849,NM_001176,NM_003834	chr16,chr16,chr16,chr16	-,+,+,-	RGS11,PDIA2,ARHGDIG,RGS11	-7659,-506,-3018,-7659
chr17:45005481-45005827	chr17	+	45005485	45005757	True	NM_203400,NM_004287,NM_054022,NM_001012511	chr17,chr17,chr17,chr17	-,+,+,+	RPRML,GOSR2,GOSR2,GOSR2	50907,-5050,-5050,-5050
chr20:54963587-54965063	chr20	+	54964096	54965080	True	NM_003600,NM_198433,NM_198434,NM_198435,NM_198436,NM_198437,NM_001033522,NM_001033521,NM_001324	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	-,-,-,-,-,-,+,+,+	AURKA,AURKA,AURKA,AURKA,AURKA,AURKA,CSTF1,CSTF1,CSTF1	2321,2321,2321,2321,2321,2321,2626,2346,2493
chr1:114519482-114520673	chr1	+	114519533	114520662	True	NM_006594,NM_020190	chr1,chr1	-,+	AP4B1,OLFML3	-71792,1367
chr9:131792382-131793064	chr9	+	131792414	131792716	True	NM_020145,NM_032809	chr9,chr9	-,+	SH3GLB2,FAM73B	-1835,6536
chr10:70718283-70719013	chr10	+	70718651	70718980	True	NM_004728,NM_152707	chr10,chr10	+,-	DDX21,SLC25A16	-2817,-431371
chr14:24505850-24506137	chr14	+	24505919	24506190	True	NM_006177,NM_001082488	chr14,chr14	-,+	NRL,DHRS4L1	47697,-260
chr19:54642877-54643169	chr19	+	54642958	54643194	True	NM_014516,NM_024316	chr19,chr19	+,-	CNOT3,LENG1	-1573,20302
chr1:35247579-35247790	chr1	+	35247614	35247692	True	NM_001164824,NM_024009,NM_001005752	chr1,chr1,chr1	-,+,+	C1orf212,GJB3,GJB3	77004,-875,218
chr4:151009712-151010066	chr4	+	151009731	151010097	True	NM_001199282,NR_036614	chr4,chr4	-,+	LRBA,DCLK2	926389,-10357
chr15:98417477-98418235	chr15	+	98417600	98418206	True	NM_183376,NR_024172,NR_024173	chr15,chr15,chr15	+,-,-	ARRDC4,LOC91948,LOC91948	85726,59,59
chr15:61520014-61520431	chr15	+	61520013	61520443	True	NM_134261,NM_207322	chr15,chr15	-,+	RORA,C2CD4A	1109,838732
chr3:125901182-125903090	chr3	+	125901332	125903070	True	NM_012190,NM_182628	chr3,chr3	-,+	ALDH1L1,CCDC37	-1847,210711
chr22:37640193-37641191	chr22	+	37640527	37641223	True	NM_013385,NM_002872	chr22,chr22	+,-	CYTH4,RAC2	37271,-222
chr17:62831312-62831514	chr17_ctg5_hap1	+	181392	181468	False	NM_014798,NR_027774,NR_027782,NM_001113738	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	-,-,-,+	PLEKHM1,PLEKHM1,PLEKHM1,ARL17A	1796,1796,1796,14252
chr17:62831312-62831514	chr17	+	62831479	62831555	True	NR_024386,NM_001165933	chr17,chr17	-,+	PLEKHM1P,RGS9	1797,301900
chr17:62831312-62831514	chr17	+	43566324	43566400	False	NR_037772,NM_014798,NR_027774,NR_027782	chr17,chr17,chr17,chr17	+,-,-,-	CRHR1,PLEKHM1,PLEKHM1,PLEKHM1	131309,1796,1796,1796
chr20:46609689-46611627	chr20	+	46609859	46611640	True	NR_026958,NM_198596	chr20,chr20	+,-	LOC284749,SULF2	377013,-194499
chr4:41361208-41361621	chr4	+	41361246	41361642	True	NM_001112717,NM_173075,NM_014988,NM_001112718	chr4,chr4,chr4,chr4	+,-,+,+	LIMCH1,APBB2,LIMCH1,LIMCH1	1161,-144611,1161,1161
chr1:45672436-45672700	chr1	+	45672479	45672711	True	NM_020883,NR_024270	chr1,chr1	-,+	ZSWIM5,LOC400752	-229,96870
chr5:9899671-9900008	chr5	+	9899789	9899995	True	NR_027112,NM_012073	chr5,chr5	-,+	LOC285692,CCT5	3991,350286
chr5:72419436-72419664	chr5	+	72419501	72419661	True	NM_004472,NM_173490,NM_001161342	chr5,chr5,chr5	-,+,+	FOXD1,TMEM171,TMEM171	324741,-3164,-3164
chr8:29799745-29801158	chr8	+	29799828	29801154	True	NR_036104,NR_024473	chr8,chr8	-,+	MIR3148,LOC286135	13760,-20850
chr12:106696029-106696243	chr12	+	106696029	106696291	True	NM_006825,NM_152772	chr12,chr12	-,+	CKAP4,TCP11L2	-54316,289
chr2:207136435-207138160	chr2	+	207136654	207138183	True	NM_020923,NM_005279	chr2,chr2	+,-	ZDBF2,GPR1	1339,-53883
chr2:96251633-96253544	chr2	+	96252019	96253264	True	NM_001164464,NM_138800	chr2,chr2	-,+	TRIM43B,TRIM43	-101540,4501
chr2:96251633-96253544	chr2	-	96155009	96155264	False	NM_001164464,NM_016044	chr2,chr2	-,+	TRIM43B,FAHD2A	-4530,-86619
chr2:158455978-158457545	chr2	+	158455981	158457577	True	NM_014568,NM_001111031	chr2,chr2	+,-	GALNT5,ACVR1C	-341693,-1909
chr12:95044478-95044963	chr12	+	95044601	95044837	True	NM_020698,NR_030171	chr12,chr12	-,+	TMCC3,MIR492	-277,183336
chr7:127288352-127288945	chr7	+	127288426	127288958	True	NM_006193,NM_014390	chr7,chr7	-,+	PAX4,SND1	-32646,3243
chr5:171434079-171434877	chr5	+	171434287	171434808	True	NM_012300,NM_001171183,NM_033645,NM_033644	chr5,chr5,chr5,chr5	-,+,-,-	FBXW11,EFCAB9,FBXW11,FBXW11	-410,186367,-410,-410
chr20:6758931-6759496	chr20	+	6758972	6759468	True	NM_017671,NM_001200	chr20,chr20	-,+	FERMT1,BMP2	-654781,-10278
chr9:95570211-95570490	chr9	+	95570211	95570507	True	NM_015250,NR_026868	chr9,chr9	-,+	BICD2,ANKRD19	-43128,1385
chr22:39715681-39715898	chr22	+	39715738	39715935	True	NM_001033853,NM_000967,NR_000028,NR_002439,NR_000026,NR_000027,NM_145731	chr22,chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,-,-,+	RPL3,RPL3,SNORD83B,SNORD43,RNU86,SNORD83A,SYNGR1	-68,-68,-5822,-620,-2837,-4426,30018
chr2:74685633-74686126	chr2	+	74685791	74686157	True	NM_001146158,NM_006302,NM_031288,NM_012477,NR_037849	chr2,chr2,chr2,chr2,chr2	-,-,+,+,+	MOGS,MOGS,INO80B,WBP1,INO80B-WBP1	6430,6430,-3692,-315,-3692
chr3:11267018-11267462	chr3	+	11267066	11267322	True	NM_001098211,NM_001128221	chr3,chr3	+,-	HRH1,VGLL4	346,343126
chr7:5632531-5632820	chr7	+	5632594	5632864	True	NM_001101,NM_003088	chr7,chr7	-,+	ACTB,FSCN1	-62362,-191
chr11:841753-842269	chr11	+	842089	842169	True	NM_003271,NM_001039490,NM_021128,NM_139030,NM_001025239,NM_001025238,NM_004357,NM_139029,NM_001025235,NM_001025234,NM_001025237,NM_001025236	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,-,+,+,+,+,+,+,+,+,+	TSPAN4,CD151,POLR2L,CD151,TSPAN4,TSPAN4,CD151,CD151,TSPAN4,TSPAN4,TSPAN4,TSPAN4	654,-9188,410,-9188,654,654,-9188,-9188,771,1911,2276,771
chr6:34217221-34217675	chr6	+	34217248	34217724	True	NM_001008704,NM_145905,NM_178508,NM_001008703	chr6,chr6,chr6,chr6	-,+,-,-	C6orf1,HMGA1,C6orf1,C6orf1	-344,-10731,-344,-344
chr16:23567160-23568440	chr16	+	23567200	23568262	True	NM_019116,NR_003501,NM_001083614	chr16,chr16,chr16	+,-,-	UBFD1,EARS2,EARS2	599,484,484
chr12:57988675-57990190	chr12	+	57988954	57989992	True	NM_178502,NM_001146259,NM_001146258,NM_001478,NM_024779,NM_001146260	chr12,chr12,chr12,chr12,chr12,chr12	+,+,+,-,+,+	DTX3,PIP4K2C,PIP4K2C,B4GALNT1,PIP4K2C,PIP4K2C	8611,-4063,-4063,37043,-4063,-4063
chr11:5081784-5082287	chr11	+	5081845	5081917	True	NM_001001916,NM_001005164	chr11,chr11	+,-	OR52J3,OR52E2	-14150,-988
chr21:44300162-44300503	chr21	+	44300280	44300538	True	NM_018669,NM_033661,NM_001001503	chr21,chr21,chr21	-,-,+	WDR4,WDR4,NDUFV3	-602,-602,12839
chr22:36782203-36782662	chr22	+	36782215	36782635	True	NM_145343,NM_002473	chr22,chr22	+,-	APOL1,MYH9	-133149,1478
chr20:634327-635545	chr20	+	634333	635518	True	NM_080725,NM_001042353	chr20,chr20	-,+	SRXN1,FAM110A	-443,178837
chr1:161275993-161276405	chr1	+	161276135	161276423	True	NM_003001,NM_000530,NM_001035511,NM_001035513,NM_001035512	chr1,chr1,chr1,chr1,chr1	+,-,+,+,+	SDHC,MPZ,SDHC,SDHC,SDHC	7742,3389,7742,7742,7742
chr12:122657186-122657666	chr12	+	122657231	122657701	True	NM_001014336,NM_152759,NM_001098519	chr12,chr12,chr12	-,+,+	IL31,LRRC43,LRRC43	1095,-5016,9965
chr9:128005424-128006315	chr9	+	128005524	128006143	True	NM_005347,NM_015635	chr9,chr9	-,+	HSPA5,GAPVD1	-1858,17967
chr19:17858099-17858502	chr19	+	17858221	17858399	True	NM_001161359,NM_001161358,NM_001080421,NM_015122,NM_001161357	chr19,chr19,chr19,chr19,chr19	+,+,-,+,+	FCHO1,FCHO1,UNC13A,FCHO1,FCHO1	3886,127,-59213,3886,127
chr5:33938302-33938894	chr5	+	33938621	33938917	True	NM_016568,NM_016180	chr5,chr5	+,-	RXFP3,SLC45A2	-2181,45913
chr11:122527858-122528154	chr11	+	122527879	122527959	True	NM_032873,NM_001098169	chr11,chr11	+,-	UBASH3B,BSX	-1537,324474
chr15:75921260-75921937	chr15	+	75921456	75921754	True	NM_001042588,NM_001042581,NM_153271,NM_005701	chr15,chr15,chr15,chr15	-,-,+,-	SNUPN,SNUPN,SNX33,SNUPN	-2737,-3010,19593,-3010
chr11:66115980-66116324	chr11	+	66116065	66116131	True	NM_015399,NM_006876,NM_001024957,NM_153266	chr11,chr11,chr11,chr11	-,-,-,+	BRMS1,B3GNT1,BRMS1,TMEM151A	-3483,-904,-3483,-56743
chr17:48796228-48796770	chr17	+	48796503	48796773	True	NM_052855,NM_016424,NM_006107	chr17,chr17,chr17	-,+,+	ANKRD40,LUC7L3,LUC7L3	-11233,152,152
chr17:80231705-80231919	chr17	+	80231778	80231838	True	NM_001893,NM_001042423,NM_139062	chr17,chr17,chr17	-,+,-	CSNK1D,SLC16A3,CSNK1D	-184,-41685,-184
chr19:20144656-20145436	chr19	+	20144670	20145260	True	NM_033196,NM_007138,NM_001077349	chr19,chr19,chr19	-,+,-	ZNF682,ZNF90,ZNF682	5067,43542,4854
chr1:918427-919000	chr1	+	918454	918786	True	NR_027693,NM_032129	chr1,chr1	-,+	C1orf170,PLEKHN1	-981,-16628
chr17:48584990-48585396	chr17	+	48584996	48585376	True	NM_032133,NM_001267	chr17,chr17	+,-	MYCBPAP,CHAD	368,-38769
chr13:25745742-25746408	chr13	+	25745874	25746381	True	NM_199138,NM_152704,NM_030979	chr13,chr13,chr13	-,-,+	FAM123A,FAM123A,PABPC3	-17,-17,-75649
chr8:135725479-135725758	chr8	+	135725498	135725738	True	NM_020863,NR_002438,NM_001174157	chr8,chr8,chr8	-,+,-	ZFAT,ZFAT-AS1,ZFAT	-206,-115235,-206
chr19:48827254-48828062	chr19	+	48827534	48827850	True	NM_144577,NM_001425	chr19,chr19	-,+	CCDC114,EMP3	-4202,778
chr19:55253735-55255274	chr19	+	55253817	55255229	True	NM_001127255,NM_015868	chr19,chr19	-,+	NLRP7,KIR2DL3	203694,-3895
chr19:55253735-55255274	chr19	+	55271819	55271869	False	NM_014218,NM_001127255	chr19,chr19	+,-	KIR2DL1,NLRP7	9395,187054
chr15:68570491-68570694	chr15	+	68570526	68570694	True	NM_017882,NM_015322	chr15,chr15	-,+	CLN6,FEM1B	-48446,-436
chr1:60371712-60373525	chr1	+	60371861	60373538	True	NM_000775,NM_015888	chr1,chr1	-,+	CYP2J2,HOOK1	18935,-91388
chr1:109202374-109203266	chr1	+	109202437	109203248	True	NM_001102592,NM_144584,NM_018061	chr1,chr1,chr1	-,-,+	HENMT1,HENMT1,PRPF38B	555,959,31683
chr18:12655808-12656056	chr18	+	12655812	12655908	True	NM_020148,NM_001128626,NM_001128627,NM_147163	chr18,chr18,chr18,chr18	-,-,-,+	SPIRE1,SPIRE1,SPIRE1,PSMG2	2062,2062,881,2829
chr2:173686000-173687337	chr2	+	173686129	173687368	True	NR_026995,NM_001100397	chr2,chr2	-,+	LOC91149,RAPGEF4	-85195,-51
chr4:151007951-151008241	chr4	+	151007981	151008088	True	NM_001040261,NM_001040260,NM_001199282,NR_036614	chr4,chr4,chr4,chr4	+,+,-,+	DCLK2,DCLK2,LRBA,DCLK2	-8611,-8611,928399,-8611
chr8:142517936-142518207	chr8	+	142517974	142518130	True	NM_032611,NM_207414	chr8,chr8	+,-	PTP4A3,FLJ43860	-86018,-644
chr12:56108936-56109196	chr12	+	56109010	56109166	True	NM_002905,NM_002206,NM_001144996,NM_001144997,NM_001487,NR_037655,NR_037657,NR_037656,NR_037658,NM_001199771	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,-,-,-,+,+,+,+,+,+	RDH5,ITGA7,ITGA7,ITGA7,BLOC1S1,BLOC1S1,BLOC1S1,BLOC1S1,BLOC1S1-RDH5,RDH5	4984,-7324,-7324,-2921,651,651,909,909,651,4984
chr22:41775264-41775649	chr22	+	41775526	41775591	True	NM_003216,NM_016272	chr22,chr22	+,-	TEF,TOB2	2371,67487
chr19:18796625-18798074	chr19	+	18796636	18797718	True	NM_004750,NM_001098482,NM_015321	chr19,chr19,chr19	-,+,+	CRLF1,CRTC1,CRTC1	-78976,-2262,-2262
chr16:67700952-67701160	chr16	+	67700956	67701158	True	NM_016948,NM_001082487,NM_001082486,NM_022914,NM_001012984,NM_032140,NM_001037281	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,-,+,-,+	PARD6A,ACD,ACD,ACD,C16orf86,C16orf48,PARD6A	-6156,-6238,-6238,-6238,-290,-328,-6156
chr22:18258145-18258545	chr22	+	18258160	18258544	True	NM_001196,NM_197967,NM_197966,NM_015367	chr22,chr22,chr22,chr22	-,-,-,+	BID,BID,BID,BCL2L13	-902,-902,-1381,-136736
chr3:44621741-44622068	chr3	+	44621744	44622024	True	NM_173658,NM_181489	chr3,chr3	+,-	ZNF660,ZNF445	4431,-102582
chr12:87057967-87058580	chr12	+	87058282	87058623	True	NM_006183,NM_013244	chr12,chr12	+,-	NTS,MGAT4C	-790271,174111
chr3:46784492-46784698	chr3	+	46784546	46784688	True	NM_001205271,NM_199183,NM_147196	chr3,chr3,chr3	-,-,+	PRSS46,PRSS45,TMIE	-6625,1607,-41774
chr1:146642317-146643469	chr1	+	146642505	146643434	True	NR_002305,NM_005399	chr1,chr1	+,-	PDIA3P,PRKAB2	5995,746
chr1:155907098-155908203	chr1	+	155907462	155908220	True	NM_014949,NM_181885	chr1,chr1	-,+	KIAA0907,RXFP4	-3274,3259
chr17:71158777-71159128	chr17	+	71158970	71159144	True	NM_001098832,NM_001050	chr17,chr17	-,+	FAM104A,SSTR2	69439,2015
chr15:65570547-65572301	chr15	+	65570679	65572288	True	NM_001101362,NM_017851	chr15,chr15	+,-	KBTBD13,PARP16	-201576,6786
chr8:57233598-57234355	chr8	+	57233653	57234217	True	NM_138969,NM_024300	chr8,chr8	-,+	SDR16C5,CHCHD7	-412,-109389
chr12:58000879-58001185	chr12	+	58001154	58001224	True	NM_001111270,NM_182947,NM_178502,NM_001478	chr12,chr12,chr12,chr12	+,+,+,-	ARHGEF25,ARHGEF25,DTX3,B4GALNT1	2738,3993,-2601,25811
chr7:148845485-148846152	chr7	+	148845543	148845955	True	NM_170686,NM_001001661	chr7,chr7	+,-	ZNF398,ZNF425	-1034,-22105
chr2:242834687-242835144	chr2	+	242834780	242835184	True	NM_173821,NM_005018	chr2,chr2	+,-	C2orf85,PDCD1	-22945,-33722
chr3:53288655-53289006	chr3	+	53288694	53289046	True	NM_001064,NM_001135055,NM_212539	chr3,chr3,chr3	-,-,+	TKT,TKT,PRKCD	1134,1134,-93522
chr11:118765554-118766038	chr11	+	118765647	118765995	True	NM_182557,NM_032966	chr11,chr11	-,+	BCL9L,CXCR5	15668,-1597
chr16:2772568-2773192	chr16	+	2772666	2773242	True	NM_016333,NM_031948	chr16,chr16	+,-	SRRM2,PRSS27	29087,-2114
chr2:74666973-74667716	chr2	+	74667053	74667495	True	NM_033046,NM_001015056,NM_031288,NM_001015055	chr2,chr2,chr2,chr2	-,-,+,-	RTKN,RTKN,INO80B,RTKN	265,265,14654,1615
chr5:56467609-56468422	chr5	+	56468045	56468455	True	NM_001203246,NM_001127235,NM_022913,NM_152622	chr5,chr5,chr5,chr5	+,+,+,-	GPBP1,GPBP1,GPBP1,MIER3	1319,2819,1319,-220091
chr17:36825989-36826361	chr17	+	36826134	36826374	True	NM_005937,NM_001130677	chr17,chr17	+,-	MLLT6,C17orf96	35498,4863
chr19:827591-827851	chr19	+	827634	827842	True	NM_001700,NM_024888	chr19,chr19	+,-	AZU1,LPPR3	2,-5682
chr9:130159825-130160040	chr9	+	130159830	130159894	True	NM_014580,NR_002449	chr9,chr9	+,-	SLC2A8,SNORA65	-416,51072
chr1:11795407-11796186	chr1	+	11795417	11795834	True	NM_001040195,NM_001040194,NM_001040197,NM_001040196,NM_020350,NM_001127325	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-	AGTRAP,AGTRAP,AGTRAP,AGTRAP,AGTRAP,MAD2L2	307,307,307,307,307,-43739
chr1:202772869-202773824	chr1	+	202772959	202773860	True	NM_006618,NR_002929	chr1,chr1	-,+	KDM5B,LOC148709	3739,57021
chr21:46707164-46707515	chr21	+	46707483	46707545	True	NM_133635,NR_026943,NR_004858,NM_015227	chr21,chr21,chr21,chr21	-,+,-,-	POFUT2,LOC642852,POFUT2,POFUT2	316,421,316,316
chr16:3210917-3211230	chr16	+	3211170	3211278	True	NR_024167,NM_001134655	chr16,chr16	-,+	MGC3771,ZNF213	-45571,-26087
chr19:14630134-14630844	chr19	+	14630255	14630880	True	NR_038104,NM_006145,NM_138501,NR_038103,NR_030369	chr19,chr19,chr19,chr19,chr19	+,-,+,+,+	TECR,DNAJB1,TECR,TECR,MIR639	9498,-1054,9498,9498,9474
chr18:9476076-9477075	chr18	+	9476233	9476885	True	NM_001042388,NM_006788	chr18,chr18	-,+	PPP4R1,RALBP1	137765,-767
chr11:66677471-66678060	chr11	+	66677601	66678091	True	NM_024036,NM_022172	chr11,chr11	+,-	LRFN4,PC	-52776,-2261
chr2:101894144-101894442	chr2	+	101894191	101894443	True	NR_003070,NM_017546	chr2,chr2	-,+	SNORD89,C2orf29	-4680,-24906
chr11:121159844-121161589	chr11	+	121160064	121161423	True	NR_029671,NM_001024956,NM_006918	chr11,chr11,chr11	-,+,+	MIR125B1,SC5DL,SC5DL	809179,2153,1964
chrX:152907166-152907608	chrX	+	152907179	152907455	True	NM_001395,NM_001135740	chrX,chrX	+,-	DUSP9,PNCK	441,31338
chr17:7339904-7340150	chr17	+	7339912	7340044	True	NM_152766,NM_000747,NM_178518,NM_004112	chr17,chr17,chr17,chr17	-,+,+,+	C17orf61,CHRNB1,TMEM102,FGF11	-32462,8361,-1201,2644
chr7:5550929-5551586	chr7	+	5551412	5551474	True	NM_024963,NM_003088	chr7,chr7	-,+	FBXL18,FSCN1	1975,80979
chr2:152818559-152820505	chr2	+	152818599	152820086	True	NM_001005747,NM_052905	chr2,chr2	-,+	CACNB4,FMNL2	10459,371664
chrX:12993159-12993401	chrX	+	12993170	12993400	True	NM_183049,NM_021109,NR_030727	chrX,chrX,chrX	+,+,-	TMSL3,TMSB4X,LOC349408	4,5,-31751
chr3:178866905-178867123	chr3	+	178866984	178867172	True	NM_152240,NM_006218	chr3,chr3	-,+	ZMAT3,PIK3CA	-77328,-731
chr4:187061520-187062988	chr4	+	187061748	187062834	True	NM_001006655,NM_015398,NM_021069	chr4,chr4,chr4	+,+,-	FAM149A,FAM149A,SORBS2	7492,3160,-183878
chr22:24649593-24649871	chr22	+	24649611	24649687	True	NM_001099782,NM_001099781,NM_004121,NR_003714	chr22,chr22,chr22,chr22	-,-,-,+	GGT5,GGT5,GGT5,POM121L9P	-8501,-8501,-8501,-2073
chr1:228675706-228676073	chr1	+	228675893	228676073	True	NM_001010858,NM_033445	chr1,chr1	+,-	RNF187,HIST3H2A	-876,-30333
chr16:81527783-81528184	chr16	+	81527807	81528101	True	NM_001076780,NM_030629	chr16,chr16	-,+	PKD1L2,CMIP	-273832,852
chr7:128548036-128548764	chr7	+	128548416	128548788	True	NM_199349,NM_001098629,NM_001135914	chr7,chr7,chr7	-,+,-	KCP,IRF5,KCP	2035,29205,2035
chr10:133796311-133796557	chr10	+	133796364	133796560	True	NM_004052,NR_033191	chr10,chr10	-,+	BNIP3,PPP2R2D	-929,-48457
chr8:145689077-145689542	chr8	+	145689095	145689539	True	NM_145754,NM_138496,NM_032687,NM_001129888	chr8,chr8,chr8,chr8	+,-,-,-	KIFC2,CYHR1,CYHR1,CYHR1	2198,929,1360,1542
chr11:67478023-67478232	chr11	+	67478223	67478273	True	NM_007103,NM_001031615	chr11,chr11	+,-	NDUFV1,ALDH3B2	-103951,-29538
chr11:67478023-67478232	chr11	+	67758065	67758115	False	NM_030930,NM_001161473	chr11,chr11	-,+	UNC93B1,ALDH3B1	13528,17932
chr3:69439531-69439898	chr3	+	69439537	69439755	True	NM_006407,NM_015123	chr3,chr3	+,-	ARL6IP5,FRMD4B	-305498,-4107
chr6:35227756-35227996	chr6	+	35227890	35228022	True	NM_018679,NM_003427	chr6,chr6	-,+	TCP11,ZNF76	-118703,-431
chr20:18040137-18041602	chr20	+	18040161	18040763	True	NM_021220,NM_001164811	chr20,chr20	-,+	OVOL2,PET117	-1640,77735
chr10:111764360-111764911	chr10	+	111764359	111764733	True	NM_001121,NM_019903,NR_030724,NM_016824	chr10,chr10,chr10,chr10	+,+,-,+	ADD3,ADD3,XPNPEP1,ADD3	2977,992,-81048,2977
chr7:23033640-23035474	chr7	+	23033976	23035510	True	NM_001172428,NM_032581	chr7,chr7	+,-	KLHL7,FAM126A	109842,18310
chr3:36962585-36963816	chr3	+	36962592	36963733	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	22878,71107
chr6:53224488-53225320	chr6	+	53224604	53225260	True	NM_012347,NM_021814	chr6,chr6	+,-	FBXO9,ELOVL5	-288884,-10662
chr19:9251531-9252725	chr19	+	9251587	9252345	True	NM_001190791,NM_020933,NM_001001958	chr19,chr19,chr19	+,+,-	ZNF317,ZNF317,OR7G3	-582,-582,-13961
chr9:100615515-100615841	chr9	+	100615715	100615817	True	NM_004473,NM_016481	chr9,chr9	+,-	FOXE1,C9orf156	-229,69085
chr2:180099224-180101196	chr2	+	180099372	180100647	True	NM_178123,NM_019091	chr2,chr2	-,+	SESTD1,PLEKHA3	28753,-754232
chr17:19767710-19769527	chr17	+	19767836	19769504	True	NM_000382,NM_014683,NM_001142610	chr17,chr17,chr17	+,-,-	ALDH3A2,ULK2,ULK2	-215835,1789,1789
chr17:65823605-65823938	chr17	+	65823822	65823890	True	NM_004459,NM_182641,NM_181655	chr17,chr17,chr17	+,+,-	BPTF,BPTF,C17orf58	-2098,-2098,165931
chr17:17344684-17345512	chr17	+	17344718	17344881	True	NM_018019,NM_001199989	chr17,chr17	+,-	MED9,RASD1	35418,54879
chr2:24824821-24825227	chr2	+	24824820	24825115	True	NM_147233,NM_001013663	chr2,chr2	+,-	NCOA1,C2orf79	-17528,191188
chr19:12403025-12403843	chr19	+	12403347	12403638	True	NM_003437,NM_001164276,NM_016264	chr19,chr19,chr19	+,-,-	ZNF136,ZNF44,ZNF44	-129526,2126,2126
chr16:89626049-89626788	chr16	+	89626137	89626700	True	NM_033251,NR_002450,NM_000977,NM_013275	chr16,chr16,chr16,chr16	+,+,+,-	RPL13,SNORD68,RPL13,ANKRD11	430,1137,389,-69168
chr8:74885120-74885819	chr8	+	74885136	74885435	True	NM_001204858,NM_001204859,NM_001204857,NM_017866,NM_001204861,NR_033334,NM_001204863,NM_001204862,NM_005648,NM_001204860,NM_001204864,NM_001040613	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,+,-,+,-,-,-,-,-,+	TCEB1,TCEB1,TCEB1,TMEM70,TCEB1,TMEM70,TCEB1,TCEB1,TCEB1,TCEB1,TCEB1,TMEM70	-614,-614,-614,2941,-993,2941,-614,-993,-614,-614,-614,2941
chr14:58893014-58893465	chr14	+	58893225	58893461	True	NM_012460,NM_014749	chr14,chr14	-,+	TIMM9,KIAA0586	825,1248
chr6:139139177-139140003	chr6	+	139139176	139139952	True	NM_001195037,NM_001128617	chr6,chr6	+,-	ECT2L,REPS1	-21979,169496
chr14:105446447-105446666	chr14	+	105446466	105446594	True	NM_174891,NM_138420	chr14,chr14	+,-	C14orf79,AHNAK2	6021,-1772
chr18:1316008-1316400	chr18	+	1316081	1316437	True	NM_001117,NR_023925	chr18,chr18	+,-	ADCYAP1,C18orf2	-410835,43243
chr4:10119607-10120457	chr4	+	10119791	10120451	True	NM_005112,NM_017491,NM_000798	chr4,chr4,chr4	-,-,+	WDR1,WDR1,DRD5	-1218,-1218,-336584
chr8:134117591-134118953	chr8	+	134117604	134118882	True	NM_001045556,NM_001045557,NM_001204869	chr8,chr8,chr8	-,-,+	SLA,SLA,WISP1	-2294,-2294,84399
chrX:66764074-66765096	chrX	+	66764088	66765061	True	NM_000044,NM_002547	chrX,chrX	+,-	AR,OPHN1	-265,888288
chr20:32407165-32407913	chr20	+	32407182	32407693	True	NM_176812,NM_183397	chr20,chr20	+,-	CHMP4B,PXMP4	-8131,-99046
chr12:100675534-100675893	chr12	+	100675630	100675799	True	NM_017988,NM_152317	chr12,chr12	+,-	SCYL2,DEPDC4	-14135,-14773
chr9:97402439-97402854	chr9	+	97402439	97402843	True	NM_000507,NM_001193331,NM_001127628	chr9,chr9,chr9	-,+,-	FBP1,C9orf3,FBP1	-516,86107,2
chr3:12202445-12203615	chr3	+	12202591	12203654	True	NM_003256,NM_005037	chr3,chr3	-,+	TIMP4,PPARG	-1740,125694
chrX:24073213-24074695	chrX	+	24073368	24074530	True	NM_030624,NM_001415	chrX,chrX	-,+	KLHL15,EIF2S3	-28065,-354
chr7:14024450-14025905	chr7	+	14024647	14025823	True	NM_001163147,NM_004956,NM_001163151,NM_001163150,NM_005738,NM_001163152,NM_001163148,NM_001163149	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,+,-,-,-	ETV1,ETV1,ETV1,ETV1,ARL4A,ETV1,ETV1,ETV1	3869,3869,366,366,-1297800,366,5277,5092
chr7:107213198-107214824	chr7	+	107213678	107214771	True	NM_001161520,NM_001008405,NM_181733,NM_181581,NR_027830,NM_018844,NM_006348	chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,+,-,+,+,+,-	COG5,BCAP29,COG5,DUS4L,BCAP29,BCAP29,COG5	-8719,6432,-8719,-9306,5650,5650,-8719
chr3:44461000-44461598	chr3	+	44461030	44461550	True	NM_173826,NM_181489	chr3,chr3	+,-	C3orf23,ZNF445	-81137,57662
chrX:49043034-49043595	chrX	+	49043130	49043368	True	NM_002668,NM_006150	chrX,chrX	+,-	PLP2,PRICKLE3	-14997,-354
chr15:48505859-48506432	chr15	+	48506013	48506433	True	NM_000338,NM_016132,NM_001184832	chr15,chr15,chr15	+,-,+	SLC12A1,MYEF2,SLC12A1	-7572,-35455,-7572
chr16:3015031-3015694	chr16	+	3015203	3015481	True	NM_172229,NM_152341,NM_004203,NM_024507	chr16,chr16,chr16,chr16	+,+,-,+	KREMEN2,PAQR4,PKMYT1,KREMEN2	-1037,3860,15109,-1037
chr20:29519635-29519996	chr20	+	29519742	29520036	True	NM_001037731,NR_003579	chr20,chr20	-,+	DEFB116,FRG1B	376402,91842
chr1:70344789-70345600	chr1	+	70344932	70345626	True	NM_017768,NR_023916	chr1,chr1	-,+	LRRC40,PIN1P1	325785,39378
chr11:107808943-107810052	chr11	+	107809108	107809710	True	NM_017515,NM_017516	chr11,chr11	-,+	SLC35F2,RAB39	-79194,-9883
chr6:42185761-42186177	chr6	+	42185760	42186233	True	NM_000409,NM_018141	chr6,chr6	+,-	GUCA1A,MRPS10	-62671,-127
chr2:32262716-32263463	chr2	+	32262938	32263184	True	NM_032574,NM_014946	chr2,chr2	-,+	DPY30,SPAST	1716,25495
chrX:103499792-103500378	chrX	+	103499803	103500347	True	NM_153448,NM_207318	chrX,chrX	-,+	ESX1,FAM199X	-204,-88553
chr3:142720314-142720637	chr3	+	142720338	142720566	True	NM_001080415,NR_034032	chr3,chr3	+,-	U2SURP,LOC100289361	-17,-29
chr3:131080616-131080861	chr3	+	131080672	131080878	True	NR_002949,NR_002985,NR_027766	chr3,chr3,chr3	+,-,+	NUDT16P1,SNORA58,NUDT16P1	-34,117249,-5
chr11:57279833-57281554	chr11	+	57280125	57281475	True	NM_003627,NM_001198810,NM_001105565	chr11,chr11,chr11	-,-,+	SLC43A1,SLC43A1,SMTNL1	1767,933,28638
chr10:70886841-70887231	chr10	+	70886991	70887068	True	NM_001057,NM_001035260,NM_004896	chr10,chr10,chr10	-,+,+	TACR2,VPS26A,VPS26A	289657,-3142,-3142
chr17:47021518-47021893	chr17	+	47021711	47021849	True	NM_023079,NM_007241	chr17,chr17	+,-	UBE2Z,SNF8	-36032,361
chr1:183549968-183550307	chr1	+	183550158	183550240	True	NM_000433,NM_015149,NM_001127651,NM_001190794,NM_001190789	chr1,chr1,chr1,chr1,chr1	-,+,-,-,-	NCF2,RGL1,NCF2,NCF2,NCF2	9549,54967,9866,9549,9549
chr4:78507573-78508317	chr4	+	78507572	78508356	True	NM_144571,NM_006419	chr4,chr4	-,+	CNOT6L,CXCL13	232240,-74716
chr6:38566584-38567300	chr6	+	38566834	38567297	True	NM_152733,NM_001172418,NM_001371	chr6,chr6,chr6	-,-,+	BTBD9,BTBD9,DNAH8	-2991,-2991,123254
chr22:30988345-30989193	chr22	+	30988346	30989139	True	NM_000355,NM_014303	chr22,chr22	+,-	TCN2,PES1	13930,-452
chr1:198647625-198648171	chr1	+	198647691	198648165	True	NM_080921,NM_133326	chr1,chr1	+,-	PTPRC,ATP6V1G3	-39606,-137616
chr11:62527638-62527941	chr11	+	62527760	62527832	True	NM_002696,NM_024784	chr11,chr11	+,-	POLR2G,ZBTB3	1178,-6104
chr17:75372444-75372808	chr17	+	75372654	75372856	True	NM_001113494,NM_001113493,NR_036200	chr17,chr17,chr17	+,+,-	SEPT9,SEPT9,MIR4316	-540,-3433,20330
chr19:58786690-58787269	chr19	+	58786748	58787261	True	NM_021089,NM_130786	chr19,chr19	+,-	ZNF8,A1BG	3056,77654
chr2:47167541-47167956	chr2	+	47167639	47167833	True	NM_001171508,NM_020458,NM_001171511	chr2,chr2,chr2	-,+,-	MCFD2,TTC7A,MCFD2	1213,479,1213
chr2:234664388-234665591	chr2	+	234664389	234665608	True	NR_037695,NR_037694,NR_037696,NM_000463	chr2,chr2,chr2,chr2	-,-,-,+	LOC100286922,LOC100286922,LOC100286922,UGT1A1	-398,-398,-398,3310
chr22:21126167-21126636	chr22	+	21126286	21126564	True	NM_002650,NM_000185	chr22,chr22	-,+	PI4KA,SERPIND1	-37331,1818
chr7:151511995-151513786	chr7	+	151512305	151513754	True	NM_145292,NM_001040633	chr7,chr7	+,-	GALNTL5,PRKAG2	139709,-348
chr13:102104663-102105035	chr13	+	102104679	102105035	True	NM_052867,NM_004791	chr13,chr13	-,+	NALCN,ITGBL1	-35866,10
chrX:102940565-102941872	chrX	+	102940602	102941903	True	NM_001142419,NM_001142418,NM_012286,NM_001142432,NM_001142421,NM_001142431,NM_001142420,NM_001142430,NM_001142422,NM_001142423,NM_001142424,NM_001142425,NM_001142426,NM_001142427,NM_001142428,NM_001142429,NM_182541	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,+	MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,TMEM31	1233,-25,-25,1233,1233,1233,1233,-25,1233,-25,-25,-25,-25,1233,1233,-25,23933
chr5:60684837-60685102	chr5	+	60684930	60685108	True	NM_001048249,NM_020928	chr5,chr5	-,+	C5orf43,ZSWIM6	-226628,-56881
chr17:7904130-7905290	chr17	+	7904166	7905297	True	NM_000180,NR_030697	chr17,chr17	+,-	GUCY2D,TRAPPC1	690,-68849
chr18:45446446-45447241	chr18	+	45446533	45447244	True	NM_005901,NM_001142397	chr18,chr18	-,+	SMAD2,CTIF	9739,618182
chr15:40642595-40643840	chr15	+	40642822	40643832	True	NM_207380,NM_001145643,NM_033510	chr15,chr15,chr15	-,+,+	C15orf52,PHGR1,DISP2	-9654,97,6601
chr10:62152406-62153886	chr10	+	62152793	62153945	True	NM_001170406,NM_020987	chr10,chr10	+,-	CDK1,ANK3	384143,-3159
chr17:42022057-42022746	chr17	+	42022552	42022762	True	NR_026770,NM_002722	chr17,chr17	+,-	C17orf88,PPY	-28029,-2719
chr11:131778941-131779306	chr11	+	131779009	131779330	True	NM_014758,NM_016522,NM_001144059,NM_001144058	chr11,chr11,chr11,chr11	-,+,+,+	SNX19,NTM,NTM,NTM	-992627,1381,1381,1381
chr4:87300690-87302588	chr4	+	87301438	87302558	True	NM_138982,NM_006264	chr4,chr4	-,+	MAPK10,PTPN13	-20063,212909
chr2:9138389-9139278	chr2	+	9138391	9139318	True	NM_001135191,NM_138799	chr2,chr2	+,-	ASAP2,MBOAT2	207575,4609
chr21:42732376-42732588	chr21	+	42732389	42732633	True	NM_002463,NM_001135099	chr21,chr21	+,-	MX2,TMPRSS2	1316,147409
chr2:237171130-237172794	chr2	+	237171276	237172792	True	NM_020311,NM_212556	chr2,chr2	+,-	CXCR7,ASB18	305587,246
chr5:176936261-176936665	chr5	+	176936333	176936575	True	NM_001144875,NM_001174102,NM_024872,NM_001144876,NM_016222	chr5,chr5,chr5,chr5,chr5	-,+,-,-,-	DOK3,PRR7,DOK3,DOK3,DDX41	902,-61058,333,902,7442
chr15:25618714-25620122	chr15	+	25619117	25620123	True	NM_130838,NR_001295	chr15,chr15	-,+	UBE3A,SNORD109A	30580,-95682
chr6:86352089-86352427	chr6	+	86352099	86352453	True	NM_006372,NM_002526,NM_001159673,NM_001159675,NM_001159674,NM_001159677,NM_001159676	chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,+,-,-,-,-,-	SYNCRIP,NT5E,SYNCRIP,SYNCRIP,SYNCRIP,SYNCRIP,SYNCRIP	640,-192848,237,-930,205,640,-930
chr19:1512534-1512739	chr19	+	1512713	1512787	True	NR_026557,NM_213604	chr19,chr19	+,-	PLK5P,ADAMTSL5	11290,451
chr1:45143266-45144464	chr1	+	45143272	45144380	True	NM_001145636,NM_024587	chr1,chr1	+,-	C1orf228,TMEM53	-2929,-3173
chr7:87848386-87848695	chr7	+	87848431	87848733	True	NM_021723,NM_003130,NM_198901	chr7,chr7,chr7	+,-,-	ADAM22,SRI,SRI	-284921,710,7625
chr22:19460152-19460644	chr22	+	19460197	19460617	True	NM_005659,NM_001178010,NM_001178011,NM_001035247,NM_003504	chr22,chr22,chr22,chr22,chr22	-,+,+,-,+	UFD1L,CDC45,CDC45,UFD1L,CDC45	6171,6796,6796,6171,6798
chr20:62206056-62206715	chr20	+	62206218	62206764	True	NM_033405,NM_024059,NM_001037335	chr20,chr20,chr20	-,+,-	PRIC285,C20orf195,PRIC285	-7111,-21896,-626
chr6:4080875-4081704	chr6	+	4080878	4081516	True	NM_001085401,NM_173563	chr6,chr6	+,-	C6orf201,C6orf146	-1489,-1421
chr1:109791739-109791976	chr1	+	109791773	109792001	True	NM_001408,NM_001005290	chr1,chr1	+,-	CELSR2,PSRC1	639,33839
chr15:99788833-99789537	chr15	+	99788928	99789587	True	NM_001040658,NM_001040659,NM_001040656,NM_001040657,NM_001040660,NM_144598,NM_022905,NM_001040655	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,-,-,-,+,-,-	TTC23,TTC23,TTC23,TTC23,TTC23,LRRC28,TTC23,TTC23	280,280,280,280,280,2064,280,280
chr2:87088287-87088528	chr2	+	87088304	87088526	True	NR_037931,NM_172101,NM_172102,NM_001178100,NM_172213,NM_004931	chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-	LOC100286979,CD8B,CD8B,CD8B,CD8B,CD8B	421,571,571,571,571,571
chr10:32787446-32789068	chr10	+	32788185	32788524	True	NM_025209,NM_145023	chr10,chr10	-,+	EPC1,CCDC7	-152072,-53200
chr15:52860557-52861001	chr15	+	52860561	52860850	True	NM_006628,NM_002748	chr15,chr15	-,+	ARPP19,MAPK6	413,-549201
chr2:40686194-40688043	chr2	+	40686375	40688087	True	NM_152390,NM_021097	chr2,chr2	+,-	TMEM178,SLC8A1	-793396,-28931
chr4:17520238-17521182	chr4	+	17520455	17521097	True	NM_001079827,NM_000320	chr4,chr4	+,-	CLRN2,QDPR	-3719,-6598
chr11:3875124-3875537	chr11	+	3875194	3875572	True	NM_001665,NM_003156	chr11,chr11	-,+	RHOG,STIM1	-12981,1360
chrX:51554544-51556210	chrX	+	51554549	51555866	True	NM_001005332,NR_033773	chrX,chrX	+,-	MAGED1,LOC441495	-8445,-129102
chr11:122716840-122717107	chr11	+	122716852	122716915	True	NM_019604,NM_001098169	chr11,chr11	+,-	CRTAM,BSX	-7648,135515
chrX:71791575-71792162	chrX	+	71791845	71792186	True	NM_018486,NM_001080851,NM_001166448,NM_001166419,NM_001166418,NM_001166422,NM_001166420	chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,+,-,-,-,-,-	HDAC8,DMRTC1B,HDAC8,HDAC8,HDAC8,HDAC8,HDAC8	817,272689,817,817,817,817,817
chr19:1105276-1105525	chr19	+	1105404	1105508	True	NM_001039847,NM_002085,NM_002695,NM_001039848	chr19,chr19,chr19,chr19	+,+,-,+	GPX4,GPX4,POLR2E,GPX4	-1519,-1519,-10013,-806
chr5:137896530-137896855	chr5	+	137896660	137896783	True	NM_001964,NR_002913	chr5,chr5	+,-	EGR1,SNORD63	-95538,77
chr7:127296999-127298260	chr7	+	127296998	127298050	True	NM_006193,NM_014390	chr7,chr7	-,+	PAX4,SND1	-41218,-4848
chr19:58891284-58891897	chr19	+	58891385	58891830	True	NM_138466,NM_001009,NM_001129730	chr19,chr19,chr19	-,+,-	ZNF837,RPS5,ZNF837	616,6805,616
chr3:119420228-119421859	chr3	+	119420228	119421643	True	NM_033364,NM_005694	chr3,chr3	+,-	C3orf15,COX17	225,-23985
chr1:43424855-43425150	chr1	+	43424906	43425192	True	NR_033967,NM_006516	chr1,chr1	+,-	FLJ32224,SLC2A1	-237,-59
chr4:48360828-48361892	chr4	+	48361102	48361799	True	NM_020846,NM_003215	chr4,chr4	+,-	SLAIN2,TEC	-17544,-89288
chr11:72466206-72467333	chr11	+	72466268	72467332	True	NM_001040118,NM_033388	chr11,chr11	-,+	ARAP1,ATG16L2	-2834,58118
chr4:175718839-175719994	chr4	+	175719216	175719733	True	NM_001130703,NM_001042543	chr4,chr4	+,-	ADAM29,GLRA3	119775,30788
chr10:133916782-133917497	chr10	+	133917072	133917491	True	NM_001105521,NM_004052	chr10,chr10	+,-	JAKMIP3,BNIP3	821,-121637
chr18:43678681-43678914	chr18	+	43678786	43678850	True	NR_026978,NM_138443,NM_004046,NM_001001937	chr18,chr18,chr18,chr18	+,+,-,-	HAUS1,HAUS1,ATP5A1,ATP5A1	5447,5447,-499,5399
chr1:165513793-165514011	chr1	+	165513833	165514033	True	NM_001005214,NR_026744	chr1,chr1	+,-	LRRC52,LOC400794	-406,37358
chr1:25665472-25666586	chr1	+	25665582	25666198	True	NM_020485,NM_014313	chr1,chr1	-,+	RHCE,TMEM50A	81227,-852
chr9:129096492-129097845	chr9	+	129096537	129097537	True	NM_001006618,NM_001011703,NM_033446	chr9,chr9,chr9	-,+,+	MAPKAP1,FAM125B,FAM125B	-627024,-7460,-7460
chr19:55591222-55591489	chr19	+	55591336	55591464	True	NM_133180,NM_138412,NM_017729	chr19,chr19,chr19	+,-,+	EPS8L1,RDH13,EPS8L1	-4168,-10422,295
chr22:30900617-30900823	chr22	+	30900680	30900829	True	NM_001161368,NM_174977,NM_016498	chr22,chr22,chr22	-,-,+	SEC14L4,SEC14L4,MTFP1	920,920,-79120
chr11:533932-534287	chr11	+	534221	534285	True	NM_176795,NM_001130442,NM_005343,NM_198075	chr11,chr11,chr11,chr11	-,-,-,+	HRAS,HRAS,HRAS,LRRC56	1315,1315,1315,3236
chr4:57548446-57549048	chr4	+	57548450	57548914	True	NM_032495,NM_001145460,NM_139212,NM_206919	chr4,chr4,chr4,chr4	-,-,-,+	HOPX,HOPX,HOPX,ARL9	-578,-578,-578,-177127
chr20:37108783-37109539	chr20	+	37108848	37109369	True	NM_020336,NR_027241	chr20,chr20	+,-	RALGAPB,LOC388796	-7420,-44830
chr3:42727942-42728611	chr3	+	42728025	42728483	True	NM_152393,NR_027753	chr3,chr3	+,-	KBTBD5,HHATL	-1065,14588
chr1:154166631-154167098	chr1	+	154166643	154167127	True	NR_030600,NM_152263,NM_001127320	chr1,chr1,chr1	-,-,+	MIR190B,TPM3,UBAP2L	-424,-2034,25527
chr17:8115210-8116117	chr17	+	8115327	8115805	True	NM_004217,NR_037447	chr17,chr17	-,+	AURKB,MIR3676	-1444,-24885
chr21:33984933-33985179	chr21	+	33984937	33985227	True	NR_036552,NR_024622,NM_021254	chr21,chr21,chr21	-,+,-	C21orf59,C21orf49,C21orf59	-24,159183,-19
chr15:101150070-101150419	chr15	+	101150172	101150425	True	NM_198243,NM_001040616,NM_024708	chr15,chr15,chr15	+,-,+	ASB7,LINS,ASB7	-7476,-7727,-7476
chr16:20412574-20413779	chr16	+	20412575	20413541	True	NM_174924,NM_017888	chr16,chr16	-,+	PDILT,ACSM5	2556,7314
chr16:1995076-1995960	chr16	+	1995562	1995910	True	NM_016332,NM_004548,NM_005061	chr16,chr16,chr16	-,+,-	SEPX1,NDUFB10,RPL3L	-2268,13606,8819
chr16:2011199-2012525	chr16	+	2011224	2012288	True	NR_003142,NM_174903,NM_005061,NM_002952,NR_002327,NR_002326,NM_006453,NR_003020,NM_004548	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,-,-,-,-,+,+,+	SNHG9,RNF151,RPL3L,RPS2,SNORA10,SNORA64,TBL3,SNORA78,NDUFB10	2708,4586,-6545,2590,230,870,9775,2896,-1758
chr11:64982407-64982997	chr11	+	64982410	64982895	True	NM_172230,NM_001004326,NR_033396	chr11,chr11,chr11	-,+,+	SYVN1,SLC22A20,SLC22A20	-80407,-1150,-1150
chr8:75227830-75229344	chr8	+	75227837	75229392	True	NM_018972,NM_020647	chr8,chr8	+,-	GDAP1,JPH1	33225,4226
chr11:75480098-75480877	chr11	+	75480228	75480908	True	NM_032564,NM_207577	chr11,chr11	+,-	DGAT2,MAP6	-501,-100749
chr11:64951345-64952231	chr11	+	64951395	64952162	True	NM_172230,NM_001198868,NM_001198870,NM_001198869,NM_005186	chr11,chr11,chr11,chr11,chr11	-,+,+,+,+	SYVN1,CAPN1,CAPN1,CAPN1,CAPN1	-49392,-2760,-2142,-2296,-2142
chrX:49030271-49030561	chrX	+	49030461	49030587	True	NM_002668,NM_006150	chrX,chrX	+,-	PLP2,PRICKLE3	-2328,12239
chr1:155147367-155148106	chr1	+	155147398	155148008	True	NM_025058,NM_173852	chr1,chr1	+,-	TRIM46,KRTCAP2	-1089,-1594
chr14:21110572-21111687	chr14	+	21110768	21111534	True	NM_001145,NM_001001968	chr14,chr14	+,-	ANG,OR6S1	40801,-918
chr1:218457478-218457998	chr1	+	218457691	218457991	True	NM_016052,NM_018040	chr1,chr1	+,-	RRP15,GPATCH2	637,-653282
chr2:98613448-98614009	chr2	+	98613452	98613722	True	NM_015348,NM_144992	chr2,chr2	-,+	TMEM131,VWA3B	-1098,89872
chr1:150693882-150694778	chr1	+	150693901	150694123	True	NM_001199829,NM_032132,NR_036211	chr1,chr1,chr1	-,-,+	HORMAD1,HORMAD1,MIR4257	-537,-537,-169549
chr1:109159593-109161234	chr1	+	109159681	109161107	True	NM_001010883,NM_001102592	chr1,chr1	+,-	FAM102B,HENMT1	-56761,42687
chr11:89950950-89951322	chr11	+	89951284	89951354	True	NM_012124,NM_005467,NM_001144073	chr11,chr11,chr11	-,+,-	CHORDC1,NAALAD2,CHORDC1	5228,-83520,5228
chr19:39370624-39370918	chr19	+	39370763	39370937	True	NM_198445,NM_001001716,NM_001195833	chr19,chr19,chr19	-,+,-	RINL,NFKBIB,RINL	-1844,19677,-1844
chrX:125300351-125300892	chrX	+	125300459	125300873	True	NM_001013628,NM_001122716	chrX,chrX	-,+	DCAF12L2,CXorf64	-379,652873
chr19:39989291-39989520	chr19	+	39989375	39989439	True	NM_016941,NM_152361,NM_203486	chr19,chr19,chr19	+,-,+	DLL3,EID2B,DLL3	117,34105,117
chr2:218939426-218941166	chr2	+	218939727	218940960	True	NM_198483,NR_002712	chr2,chr2	+,-	RUFY4,CXCR2P1	-6041,-13714
chr5:41439106-41440425	chr5	+	41439137	41440296	True	NM_175921,NM_001005473	chr5,chr5	+,-	C5orf51,PLCXD3	464173,70491
chr19:4771150-4772461	chr19	+	4771830	4772407	True	NR_029607,NR_027148,NM_139159	chr19,chr19,chr19	+,+,-	MIR7-3,C19orf30,DPP9	-1199,-2764,-47975
chr1:204920755-204921409	chr1	+	204920926	204921428	True	NM_203376,NM_001160331	chr1,chr1	-,+	TMEM81,NFASC	132210,-7624
chr9:119430764-119432610	chr9	+	119431038	119431809	True	NM_198186,NM_001099679	chr9,chr9	-,+	ASTN2,TRIM32	17738,17771
chr10:46970474-46970675	chr10	+	46970495	46970721	True	NM_014696,NM_181519,NM_031912	chr10,chr10,chr10	+,-,-	GPRIN2,SYT15,SYT15	22824,40,40
chr11:32111501-32112293	chr11	+	32111552	32112334	True	NM_001127612,NM_002901	chr11,chr11	-,+	PAX6,RCN1	-272043,142
chr19:3604898-3605108	chr19	+	3604902	3605062	True	NM_001060,NM_133261,NM_201636	chr19,chr19,chr19	-,+,-	TBXA2R,GIPC3,TBXA2R	1819,-19384,1819
chr20:62888275-62889075	chr20	+	62888301	62889117	True	NM_001104925,NM_005286	chr20,chr20	+,-	PCMTD2,NPBWR2	-1304,-150117
chr19:41768371-41768664	chr19	+	41768518	41768622	True	NM_144732,NM_007040,NM_000660	chr19,chr19,chr19	+,+,-	HNRNPUL1,HNRNPUL1,TGFB1	-189,1497,91259
chr17:15164477-15164719	chr17	+	15164530	15164758	True	NM_000304,NR_033371,NM_153321,NM_153322	chr17,chr17,chr17,chr17	-,+,-,-	PMP22,CDRT7,PMP22,PMP22	3936,-230289,1181,-437
chr2:161343367-161344875	chr2	+	161343464	161344734	True	NM_002897,NM_133484,NM_016836	chr2,chr2,chr2	-,+,-	RBMS1,TANK,RBMS1	5634,648731,5634
chr5:124181368-124182198	chr5	+	124181745	124182207	True	NM_004384,NM_020747	chr5,chr5	+,-	CSNK1G3,ZNF608	-1334011,-100940
chr11:925084-925363	chr11	+	925205	925349	True	NM_001142675,NM_012305	chr11,chr11	-,+	CHID1,AP2A2	-10147,491
chr10:180028-180605	chr10	+	180032	180608	True	NM_006624,NM_001164154,NM_001202465,NM_001202464,NM_001202466,NM_212479	chr10,chr10,chr10,chr10,chr10,chr10	+,-,+,+,+,+	ZMYND11,TUBB8,ZMYND11,ZMYND11,ZMYND11,ZMYND11	-28,-84528,-9,815,-9,-9
chr22:41985730-41986114	chr22	+	41985732	41986074	True	NM_014460,NM_002676	chr22,chr22	+,-	CSDC2,PMM1	-28769,41
chr16:31492279-31493358	chr16	+	31492401	31493339	True	NM_022744,NM_015927,NM_003041,NM_001164719,NM_001042454	chr16,chr16,chr16,chr16,chr16	-,+,+,+,+	C16orf58,TGFB1I1,SLC5A2,TGFB1I1,TGFB1I1	26427,-7926,1099,-8923,-8976
chr3:108479162-108479988	chr3	+	108479317	108479963	True	NM_016388,NM_032579	chr3,chr3	+,-	TRAT1,RETNLB	61667,-3187
chr13:20135135-20135347	chr13	+	20135158	20135378	True	NM_199254,NM_017520	chr13,chr13	-,+	TPTE2,MPHOSPH8	-24255,72409
chr13:20135135-20135347	chr13	-	21834507	21834557	False	NM_145061,NM_024026	chr13,chr13	-,+	SKA3,MRP63	-83766,-84186
chr11:46350337-46351363	chr11	+	46350977	46351397	True	NM_000741,NM_201532	chr11,chr11	-,+	CHRM4,DGKZ	56760,3057
chr11:87908947-87910302	chr11	+	87909054	87910174	True	NM_022337,NM_000372	chr11,chr11	-,+	RAB38,TYR	-419,1000865
chr12:12965615-12966193	chr12	+	12965898	12966164	True	NM_016355,NM_201224,NM_006143	chr12,chr12,chr12	+,+,-	DDX47,DDX47,GPR19	115,115,-116777
chr17:74350900-74351884	chr17	+	74350974	74351429	True	NM_002766,NM_001142601	chr17,chr17	-,+	PRPSAP1,SPHK1	-744,29260
chr3:101229551-101230754	chr3	+	101229744	101230604	True	NM_001077203,NM_020654,NR_036433	chr3,chr3,chr3	-,-,+	SENP7,SENP7,FAM172B	1533,1533,7111
chr2:71296049-71296268	chr2	+	71296089	71296283	True	NM_032601,NM_017567	chr2,chr2	-,+	MCEE,NAGK	61161,-732
chr2:74056239-74056572	chr2	+	74056316	74056594	True	NM_201647,NM_006463,NM_003584,NM_213622	chr2,chr2,chr2,chr2	+,+,-,+	STAMBP,STAMBP,DUSP11,STAMBP	-281,-240,-49032,-220
chrX:123502284-123504054	chrX	+	123502384	123503741	True	NM_002351,NM_001163278	chrX,chrX	+,-	SH2D1A,ODZ1	-22303,593977
chr11:129942164-129942665	chr11	+	129942214	129942372	True	NR_024516,NR_024515,NM_001642,NM_001142278,NM_199437,NM_001142277,NM_001142276	chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,-,+,+	APLP2,APLP2,APLP2,APLP2,PRDM10,APLP2,APLP2	-2556,-2556,-2556,-2556,-69484,-2556,-2556
chr16:27324339-27324652	chr16	+	27324639	27324701	True	NM_000418,NM_001008699,NM_145080	chr16,chr16,chr16	+,+,-	IL4R,IL4R,NSMCE1	549,549,-44526
chr15:78728362-78729190	chr15	+	78728656	78729212	True	NM_025234,NM_004136	chr15,chr15	-,+	WDR61,IREB2	-136716,1305
chr10:125426402-125428274	chr10	+	125426508	125428293	True	NM_198148,NM_153442	chr10,chr10	-,+	CPXM2,GPR26	223258,-688
chr10:98743795-98744049	chr10	+	98743798	98744098	True	NM_003061,NM_015652	chr10,chr10	-,+	SLIT1,C10orf12	201635,-2808
chr6:52435217-52436227	chr6	+	52435298	52436229	True	NM_012288,NR_024403	chr6,chr6	-,+	TRAM2,LOC730101	5683,92969
chr13:41768381-41768691	chr13	+	41768454	41768574	True	NM_001110798,NM_032138	chr13,chr13	+,-	NAA16,KBTBD7	116766,178
chrX:66766753-66767060	chrX	+	66766765	66767103	True	NM_000044,NM_002547	chrX,chrX	+,-	AR,OPHN1	-2942,886246
chr17:39535260-39535547	chr17	+	39535284	39535528	True	NM_030975,NM_021013,NM_002279	chr17,chr17,chr17	+,-,-	KRTAP9-9,KRT34,KRT33B	-123699,3158,-9237
chr17:39535260-39535547	chr17	+	39551348	39551420	False	NM_002277,NM_030975	chr17,chr17	-,+	KRT31,KRTAP9-9	2474,-139763
chr12:120703975-120704593	chr12	+	120704043	120704629	True	NM_001080855,NM_002859,NM_012240	chr12,chr12,chr12	-,-,+	PXN,PXN,SIRT4	-480,-480,35494
chr1:27714703-27715581	chr1	+	27714726	27715516	True	NM_005281,NM_207397	chr1,chr1	+,-	GPR3,CD164L2	3635,-4921
chr5:65222359-65223738	chr5	+	65222612	65223597	True	NR_028474,NM_001006600,NM_018695	chr5,chr5,chr5	-,+,+	LOC100303749,ERBB2IP,ERBB2IP	17855,-279,-279
chr19:19771145-19772107	chr19	+	19771952	19772084	True	NM_020410,NM_033204	chr19,chr19	-,+	ATP13A1,ZNF101	2469,7578
chr6:109405611-109406645	chr6	+	109406083	109406423	True	NM_014454,NM_001083535	chr6,chr6	-,+	SESN1,CEP57L1	9344,9932
chr9:94716900-94717906	chr9	+	94716985	94717879	True	NR_015444,NM_004560	chr9,chr9	+,-	LOC100128076,ROR2	177236,-4541
chr17:56595742-56596057	chr17	+	56595854	56596066	True	NR_037156,NM_002876,NM_004687	chr17,chr17,chr17	-,+,-	SEPT4,RAD51C,MTMR4	9358,173896,-603
chrX:45063635-45065635	chrX	+	45064358	45065606	True	NM_024689,NM_176819,NM_021140	chrX,chrX,chrX	-,-,+	CXorf36,CXorf36,KDM6A	-4212,-4212,-331986
chr5:43131433-43132771	chr5	+	43131586	43132596	True	NM_003432,NR_034127	chr5,chr5	+,-	ZNF131,LOC100132356	-9995,-64513
chr19:42896340-42897223	chr19	+	42896346	42897208	True	NM_032488,NM_001410	chr19,chr19	-,+	CNFN,MEGF8	-1902,-66638
chr12:65006549-65007203	chr12	+	65006662	65007127	True	NR_037515,NM_178169,NR_030347	chr12,chr12,chr12	-,+,+	MIR548Z,RASSF3,MIR548C	9321,-2429,9161
chr21:40684369-40684624	chr21	+	40684376	40684612	True	NM_004627,NM_001007246,NM_018963,NR_033800,NM_033656	chr21,chr21,chr21,chr21,chr21	+,-,-,-,-	WRB,BRWD1,BRWD1,NCRNA00257,BRWD1	67600,994,994,2326,994
chrX:1333031-1333471	chrY	+	1283443	1283517	False	NM_022148,NM_001161531,NM_001012288	chrY,chrY,chrY	-,+,-	CRLF2,CSF2RA,CRLF2	-1913,54175,-1916
chrX:1333031-1333471	chrX	+	1333443	1333517	True	NM_022148,NM_001161531,NM_001012288	chrX,chrX,chrX	-,+,-	CRLF2,CSF2RA,CRLF2	-1913,54175,-1916
chr11:108093779-108094067	chr11	+	108093778	108094110	True	NM_000051,NM_002519	chr11,chr11	+,-	ATM,NPAT	-270,-413
chr12:9917617-9918247	chr12	+	9917658	9918162	True	NR_026671,NM_001781,NR_026672,NM_016523	chr12,chr12,chr12,chr12	-,-,-,+	CD69,CD69,CD69,KLRF1	-4161,-4161,-4161,61914
chr2:38895799-38896347	chr2	+	38895983	38896175	True	NM_138801,NM_138394	chr2,chr2	+,-	GALM,HNRPLL	-2989,-65805
chr8:99128765-99129180	chr8	+	99129058	99129174	True	NM_015029,NM_001145861,NM_001145860,NM_005836	chr8,chr8,chr8,chr8	+,+,+,-	POP1,POP1,POP1,HRSP12	893,346,346,294
chr8:12870415-12871181	chr8	+	12870415	12871188	True	NM_001164271,NM_001099677	chr8,chr8	-,+	DLC1,KIAA1456	102618,-701
chr7:41745459-41746291	chr7	+	41745551	41746233	True	NM_002192,NR_027119	chr7,chr7	-,+	INHBA,LOC285954	-2845,-12056
chr1:11358515-11359313	chr1	+	11358746	11359284	True	NM_004958,NM_013319	chr1,chr1	-,+	MTOR,UBIAD1	-36138,-25542
chr10:76481144-76482531	chr10	+	76481242	76482304	True	NM_001003892,NM_012330	chr10,chr10	-,+	DUPD1,MYST4	336018,104074
chr19:18654528-18655104	chr19	+	18654733	18655125	True	NM_012181,NM_001171948	chr19,chr19	-,+	FKBP8,C19orf50	-350,13446
chr17:79624959-79626430	chr17	+	79625983	79626147	True	NM_002602,NM_199287,NM_001039842,NR_026872	chr17,chr17,chr17,chr17	-,+,-,-	PDE6G,CCDC137,C17orf90,PDE6G	-2376,7613,7521,-2376
chr1:153631682-153631996	chr1	+	153631795	153632035	True	NM_012437,NM_004515	chr1,chr1	+,-	SNAPIN,ILF2	-701,11494
chr1:184726832-184727937	chr1	+	184726918	184727742	True	NM_025191,NM_007212	chr1,chr1	-,+	EDEM3,RNF2	-2877,286808
chr3:48490673-48492310	chr3	+	48490887	48492311	True	NM_130384,NM_024661,NM_015933,NM_032166	chr3,chr3,chr3,chr3	+,-,+,+	ATRIP,CCDC51,CCDC72,ATRIP	-2727,-9358,-9259,-2727
chr10:134119671-134119996	chr10	+	134119717	134119921	True	NM_001143758,NM_173575	chr10,chr10	+,-	LRRC27,STK32C	25692,1606
chr5:138531846-138532811	chr5	+	138531983	138532558	True	NM_001194954,NM_001037633,NM_022464	chr5,chr5,chr5	+,-,-	MATR3,SIL1,SIL1	76882,1558,1558
chr11:12029547-12030020	chr11	+	12029592	12029988	True	NM_013253,NM_014632,NM_015881,NM_001018057	chr11,chr11,chr11,chr11	-,+,-,-	DKK3,MICAL2,DKK3,DKK3	979,102149,691,248
chr13:37572801-37573023	chr13	+	37572826	37572906	True	NM_001142364,NM_013338,NM_181503	chr13,chr13,chr13	-,-,+	ALG5,ALG5,EXOSC8	648,648,1771
chr1:1384444-1385045	chr1	+	1384868	1385068	True	NR_026871,NM_001039211	chr1,chr1	-,+	LOC441869,ATAD3C	-28218,0
chr11:117945632-117946122	chr11	+	117945756	117946146	True	NM_001173551,NM_001173552,NM_001142349,NM_001083947,NM_019894	chr11,chr11,chr11,chr11,chr11	+,+,-,+,+	TMPRSS4,TMPRSS4,SCN4B,TMPRSS4,TMPRSS4	1580,1580,70088,1580,1580
chr14:52735609-52735850	chr14	+	52735682	52735848	True	NM_007361,NM_000953	chr14,chr14	-,+	NID2,PTGDR	-199736,-1302
chr10:135054340-135054717	chr10	+	135054359	135054632	True	NR_030170,NM_014468	chr10,chr10	-,+	MIR202,VENTX	6543,-3005
chr1:78217464-78218532	chr1	+	78218113	78218405	True	NM_015017,NM_201626,NM_198549,NM_201624	chr1,chr1,chr1,chr1	-,-,+,-	USP33,USP33,FAM73A,USP33	7192,7192,26903,7192
chr12:54781217-54783138	chr12	+	54781282	54783115	True	NM_015481,NM_001130968,NR_029894,NM_001130967	chr12,chr12,chr12,chr12	-,-,+,-	ZNF385A,ZNF385A,MIR148B,ZNF385A	-2801,2018,-50333,2018
chr9:108466926-108468717	chr9	+	108467246	108468748	True	NM_018112,NM_005502	chr9,chr9	+,-	TMEM38B,ABCA1	-10485,-776719
chr17:64189201-64191056	chr17	+	64189358	64190842	True	NM_145036,NM_002737,NM_001199165	chr17,chr17,chr17	-,+,-	CCDC46,PRKCA,CCDC46	-1371,108083,-1146
chr19:56915847-56916130	chr19	+	56915893	56916179	True	NM_001159860,NM_001159861,NM_152478,NM_144690	chr19,chr19,chr19,chr19	+,+,+,-	ZNF583,ZNF583,ZNF583,ZNF582	-563,-228,-252,-11004
chr3:183895027-183895909	chr3	+	183895054	183895954	True	NM_005787,NM_001025205,NM_018358,NM_004068	chr3,chr3,chr3,chr3	-,+,+,+	ALG3,AP2M1,ABCF3,AP2M1	70855,-2471,7908,-2471
chr5:36278543-36279009	chr5	+	36278544	36278831	True	NM_032637,NM_001161429	chr5,chr5	+,-	SKP2,RANBP3L	-126409,23235
chr8:17742708-17744189	chr8	+	17742817	17743975	True	NM_006197,NM_201552,NM_201553,NM_147203,NM_004467	chr8,chr8,chr8,chr8,chr8	+,-,-,-,-	PCM1,FGL1,FGL1,FGL1,FGL1	36390,9124,8990,8990,9124
chr2:128432193-128432447	chr2	+	128432234	128432358	True	NM_001161404,NM_001136037,NM_001161403,NM_032740	chr2,chr2,chr2,chr2	-,-,-,+	LIMS2,LIMS2,LIMS2,SFT2D3	7052,456,456,26238
chr3:183853242-183853492	chr3	+	183853419	183853525	True	NM_003907,NM_005787	chr3,chr3	+,-	EIF2B5,ALG3	-660,113284
chr6:14972519-14973364	chr6	+	14972874	14973239	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	273287,690101
chr6:14850797-14851417	chr6	+	14850957	14851455	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	395071,811884
chr11:114263182-114264792	chr11	+	114263554	114264170	True	NM_016090,NM_019021	chr11,chr11	+,-	RBM7,C11orf71	7213,7031
chr1:152080420-152081939	chr1	+	152080445	152081955	True	NR_024237,NM_007113	chr1,chr1	+,-	LOC100132111,TCHH	-269551,4651
chr11:94519571-94520708	chr11	+	94519678	94520567	True	NM_016403,NM_130847	chr11,chr11	-,+	CWC15,AMOTL1	186259,-18221
chr5:157414268-157415140	chr5	+	157414593	157415185	True	NM_014666,NM_173491	chr5,chr5	-,+	CLINT1,LSM11	-128410,-243889
chr5:10595269-10595662	chr5	+	10595496	10595667	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-31112,165771
chr1:109760911-109761608	chr1	+	109761055	109761421	True	NM_006513,NM_001005290,NR_034072	chr1,chr1,chr1	+,-,+	SARS,PSRC1,SARS	-4598,64419,-4598
chr17:4985496-4986090	chr17	+	4985664	4985828	True	NM_014519,NM_153018	chr17,chr17	-,+	ZNF232,ZFP3	40621,-3962
chr11:10328482-10328995	chr11	+	10328546	10328968	True	NM_030962,NM_001124	chr11,chr11	-,+	SBF2,ADM	-12792,-1955
chr5:52409858-52411357	chr5	+	52409862	52411052	True	NM_176806,NM_004531,NR_034107	chr5,chr5,chr5	-,-,+	MOCS2,MOCS2,LOC257396	-4264,-4537,-4226
chr3:186433469-186433971	chr3	+	186433602	186433836	True	NM_001102416,NM_002916,NM_001166451,NM_000893	chr3,chr3,chr3,chr3	+,-,+,+	KNG1,RFC4,KNG1,KNG1	1261,90507,1261,1261
chr14:100843079-100843727	chr14	+	100843116	100843622	True	NM_001161476,NM_173701,NM_024515,NM_004184,NM_213646,NM_213645	chr14,chr14,chr14,chr14,chr14,chr14	+,-,+,-,-,-	WDR25,WARS,WDR25,WARS,WARS,WARS	-412,-436,-334,-1189,-1189,-436
chr11:2012952-2013375	chr11	+	2013084	2013282	True	NR_024471,NR_002196,NR_030533,NM_021134	chr11,chr11,chr11,chr11	-,-,-,+	LOC100133545,H19,MIR675,MRPL23	-1934,5833,4829,-44633
chr2:111230666-111231693	chr2	+	111230718	111231404	True	NR_037626,NR_038099,NR_027467,NM_001205288,NR_027145,NM_033514	chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-	LOC100507334,LOC100288695,LIMS3,LOC100288695,LIMS3-LOC440895,LIMS3	-227554,-66,-66,-66,-66,-66
chr2:111230666-111231693	chr2	-	110655256	110655942	False	NR_036225,NR_038099,NR_027467,NM_001205288,NR_027145,NM_033514	chr2,chr2,chr2,chr2,chr2,chr2	-,+,+,+,+,+	MIR4267,LOC100288695,LIMS3,LOC100288695,LIMS3-LOC440895,LIMS3	171727,66,66,66,66,66
chr2:111230666-111231693	chr2	-	109270638	109271167	False	NM_001193485,NM_022336	chr2,chr2	+,-	LIMS1,EDAR	99,334711
chr1:39810026-39811069	chr1	+	39810378	39810838	True	NM_033044,NR_003929	chr1,chr1	+,-	MACF1,PPIEL	-13622,214596
chr14:88790540-88791363	chr14	+	88790657	88791355	True	NM_021161,NM_001040428,NM_138317	chr14,chr14,chr14	-,+,-	KCNK10,SPATA7,KCNK10	1951,60632,-1064
chr2:10586612-10587835	chr2	+	10586614	10587780	True	NM_002539,NM_134421,NR_028374	chr2,chr2,chr2	-,+,-	ODC1,HPCAL1,SNORA80B	723,-142847,-11
chr1:238046962-238048463	chr1	+	238047636	238048372	True	NR_027247,NM_021186	chr1,chr1	+,-	LOC100130331,ZP4	-22213,5900
chr9:98150536-98150843	chr9	+	98150771	98150851	True	NM_000136,NR_029496	chr9,chr9	-,+	FANCC,MIR24-1	-70780,-302519
chr1:48460710-48461557	chr1	+	48460850	48461438	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	1174,226918
chr9:136502746-136503205	chr9	+	136502788	136503170	True	NM_000787,NM_001080515	chr9,chr9	+,-	DBH,FAM163B	-1354,-57420
chr13:41840076-41840849	chr13	+	41840409	41840856	True	NM_001110798,NM_004294	chr13,chr13	+,-	NAA16,MTRF1	44484,-2696
chr5:159543385-159543819	chr5	+	159543534	159543824	True	NM_001130864,NM_052927,NM_001130958	chr5,chr5,chr5	-,-,+	PWWP2A,PWWP2A,FABP6	2678,2678,70549
chr10:134602820-134603058	chr10	+	134602836	134602896	True	NM_005539,NM_177400	chr10,chr10	+,-	INPP5A,NKX6-2	-251534,-3299
chr14:24807193-24807614	chr14	+	24807197	24807651	True	NM_139247,NM_181657,NM_006871,NM_001198568,NM_001198592	chr14,chr14,chr14,chr14,chr14	-,+,-,-,-	ADCY4,LTB4R,RIPK3,ADCY4,ADCY4	-2920,-24935,1641,-2920,-2920
chr6:169652487-169652787	chr6	+	169652547	169652697	True	NM_001029863,NM_003247	chr6,chr6	+,-	C6orf120,THBS2	449559,1490
chr14:77580193-77581426	chr14	+	77580390	77581464	True	NM_174976,NM_033426	chr14,chr14	-,+	ZDHHC22,KIAA1737	26720,-15865
chr2:109747421-109748111	chr2	+	109747533	109748147	True	NR_036223,NR_029193,NM_001099289	chr2,chr2,chr2	-,-,+	MIR4265,LOC100287216,SH3RF3	9947,-958,-1588
chr1:233424737-233424959	chr1	+	233424747	233424933	True	NM_032435,NM_014801	chr1,chr1	+,-	KIAA1804,PCNXL2	38580,6576
chr11:27743581-27744047	chr11	+	27743643	27744022	True	NM_170731,NR_033315,NM_170732,NM_001143805,NM_001143807,NM_001143806	chr11,chr11,chr11,chr11,chr11,chr11	-,+,-,-,-,-	BDNF,BDNF-AS1,BDNF,BDNF,BDNF,BDNF	-38,-215295,-1317,-1317,-2349,-1317
chr6:34857959-34859647	chr6	+	34858256	34859383	True	NM_005643,NM_015245	chr6,chr6	-,+	TAF11,ANKS1A	-2437,-1276
chr17:64879717-64880103	chr17	+	64879716	64879958	True	NM_014877,NM_145811	chr17,chr17	-,+	HELZ,CACNG5	361411,-6376
chr16:84003546-84003911	chr16	+	84003568	84003928	True	NM_001080442,NM_019065	chr16,chr16	-,+	SLC38A8,NECAB2	71884,-1382
chr12:7120393-7120972	chr12	+	7120562	7121003	True	NM_005768,NM_006331	chr12,chr12	-,+	LPCAT3,EMG1	4890,-40669
chr6:33240057-33241408	chr6_dbb_hap3	+	4522419	4522486	False	NM_003782,NM_022551,NM_022553	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	+,+,-	B3GALT4,RPS18,VPS52	3752,-1305,-1435
chr6:33240057-33241408	chr6	+	33241097	33241164	True	NM_003782,NM_022551,NM_022553	chr6,chr6,chr6	+,+,-	B3GALT4,RPS18,VPS52	3752,-1305,-1435
chr6:33240057-33241408	chr6_cox_hap2	+	4684907	4684974	False	NM_003782,NM_022551,NM_022553	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,+,-	B3GALT4,RPS18,VPS52	3752,-1305,-1435
chr9:34646772-34647891	chr9	+	34646856	34647906	True	NM_000155,NM_147157,NM_147162,NM_005866,NM_001142784,NM_004512	chr9,chr9,chr9,chr9,chr9,chr9	+,-,+,-,+,+	GALT,SIGMAR1,IL11RA,SIGMAR1,IL11RA,IL11RA	-272,-9088,6025,-9088,4275,6025
chr3:184100335-184100977	chr3	+	184100578	184100958	True	NM_001177598,NM_003741,NM_000460,NM_001177597	chr3,chr3,chr3,chr3	-,+,-,-	THPO,CHRD,THPO,THPO	-4646,-2768,-4646,-4646
chr5:180469801-180471308	chr5	+	180469916	180471350	True	NM_152547,NM_203297	chr5,chr5	+,-	BTNL9,TRIM7	-2742,156630
chr17:2419480-2420111	chr17	+	2419575	2419826	True	NM_000430,NM_024086	chr17,chr17	+,-	PAFAH1B1,METTL16	77096,-4375
chr7:6542399-6542905	chr7	+	6542412	6542928	True	NM_006854,NM_001134387	chr7,chr7	-,+	KDELR2,ZDHHC4	-18563,74136
chr4:185572367-185572893	chr4	+	185572464	185572767	True	NM_152683,NM_032991,NM_004346	chr4,chr4,chr4	+,-,-	CCDC111,CASP3,CASP3	-1756,-1835,-1835
chr17:20944356-20944630	chr17	+	20944486	20944599	True	NM_015276,NM_015510	chr17,chr17	-,+	USP22,DHRS7B	1810,85658
chr8:107284096-107284465	chr8	+	107284186	107284490	True	NM_018002,NM_139166,NM_001198533	chr8,chr8,chr8	+,-,+	OXR1,ABRA,OXR1	-1831,498032,-1831
chr10:24536652-24537319	chr10	+	24536743	24537221	True	NM_020824,NR_023388	chr10,chr10	-,+	ARHGAP21,PRINS	475432,-747
chr17:80673916-80674187	chr17	+	80674037	80674225	True	NM_024619,NM_006822	chr17,chr17	+,-	FN3KRP,RAB40B	356,-17439
chr11:68519720-68521014	chr11	+	68519731	68520917	True	NM_001039656,NM_015973,NM_004923	chr11,chr11,chr11	-,+,-	MTL5,GAL,MTL5	-743,-67799,-743
chr12:7899716-7900649	chr12	+	7899737	7900699	True	NM_203503,NM_001145465,NM_130441	chr12,chr12,chr12	-,+,-	CLEC4C,NANOGNB,CLEC4C	1422,17112,1422
chr3:48934246-48935641	chr3	+	48934366	48935440	True	NM_006321,NM_000387	chr3,chr3	+,-	ARIH2,SLC25A20	20840,1043
chr2:39144234-39146159	chr2	+	39144514	39145751	True	NM_001145451,NR_028386,NM_198963	chr2,chr2,chr2	+,-,-	ARHGEF33,LOC375196,DHX57	752,41784,-41493
chr8:1711510-1711948	chr8	+	1711914	1711988	True	NR_033895,NM_018941	chr8,chr8	-,+	LOC286083,CLN8	-461087,-95
chrX:117629477-117629812	chrX	+	117629478	117629846	True	NM_001168301,NM_144658	chrX,chrX	-,+	KLHL13,DOCK11	-378175,25
chr15:64677363-64677746	chr15	+	64677366	64677517	True	NM_001029989,NM_016213,NM_014736	chr15,chr15,chr15	-,+,-	KIAA0101,TRIP4,KIAA0101	-3664,2485,-3664
chr11:18548248-18548455	chr11	+	18548294	18548502	True	NM_144972,NM_006292	chr11,chr11	+,-	LDHAL6A,TSG101	-70971,37
chr15:72556218-72557479	chr15	+	72556395	72557494	True	NM_020214,NR_027262	chr15,chr15	-,+	PARP6,C15orf34	6184,110959
chr2:89090407-89091664	chr2	+	89090985	89091441	True	NM_004836,NR_015424	chr2,chr2	-,+	EIF2AK3,ANKRD36BP2	-163891,-25626
chr1:28696723-28696958	chr1	+	28696727	28696927	True	NM_014280,NM_001048183	chr1,chr1	-,+	DNAJC8,PHACTR4	-137185,-685
chr16:89554398-89555934	chr16	+	89554432	89555764	True	NM_199367,NM_013275	chr16,chr16	+,-	SPG7,ANKRD11	19040,1255
chrX:152761830-152762401	chrX	+	152761851	152762329	True	NM_001711,NM_017518	chrX,chrX	+,-	BGN,HAUS7	-1555,-25248
chr2:11811104-11812091	chr2	+	11811104	11812076	True	NM_012344,NM_145693	chr2,chr2	-,+	NTSR2,LPIN1	-775,74663
chr11:6440229-6440612	chr11	+	6440387	6440585	True	NM_001164,NM_145689,NM_001007593	chr11,chr11,chr11	-,-,+	APBB1,APBB1,SMPD1	-87,109,-28794
chr4:24589233-24590638	chr4	+	24589407	24590466	True	NM_001358,NM_003102	chr4,chr4	-,+	DHX15,SOD3	-3223,206618
chr8:68865424-68867233	chr8	+	68865465	68866782	True	NM_024870,NM_020361,NM_025170	chr8,chr8,chr8	+,-,+	PREX2,CPA6,PREX2	-913,-206845,-913
chr16:2561755-2562605	chr16	+	2561756	2562620	True	NM_001145815,NM_001048212,NM_015944,NM_001694,NM_001198569	chr16,chr16,chr16,chr16,chr16	+,-,+,+,+	AMDHD2,CEMP1,AMDHD2,ATP6V0C,ATP6V0C	7742,18839,7742,1250,1106
chr3:113557273-113557567	chr3	+	113557485	113557609	True	NM_017577,NM_025146	chr3,chr3	+,-	GRAMD1C,NAA50	71,-92365
chr6:74159859-74160431	chr6	+	74160181	74160353	True	NM_001123226,NM_138441	chr6,chr6	+,-	MTO1,MB21D1	11100,1748
chr1:32540604-32541871	chr1	+	32540635	32541644	True	NM_018056,NM_080391	chr1,chr1	+,-	TMEM39B,PTP4A2	-2183,-136647
chrX:149634202-149636143	chrX	+	149634361	149636187	True	NM_005491,NM_001184808	chrX,chrX	+,-	MAMLD1,CD99L2	-20692,431152
chr19:57339178-57340150	chr19	+	57339233	57339926	True	NM_001146186,NR_024059	chr19,chr19	-,+	PEG3,MIMT1	-2859,12343
chr6:28409776-28410409	chr6	+	28409932	28410430	True	NM_001509,NM_001012455	chr6,chr6	+,-	GPX5,ZSCAN23	83358,899
chr19:49249964-49250344	chr19	+	49250191	49250365	True	NM_019113,NM_000148,NM_017805,NM_182575	chr19,chr19,chr19,chr19	+,-,-,-	FGF21,FUT1,RASIP1,IZUMO1	8978,8332,-6221,-25
chr17:20524591-20526075	chr17	+	20524606	20525847	True	NM_001190790,NR_029393	chr17,chr17	+,-	CDRT15L2,KRT16P3	-41627,-116795
chr7:108095969-108096202	chr7	+	108096105	108096173	True	NM_001193584,NM_005010,NM_012328,NM_001193583,NM_001193582	chr7,chr7,chr7,chr7,chr7	-,-,+,-,-	NRCAM,NRCAM,DNAJB9,NRCAM,NRCAM	718,718,114015,718,718
chr7:116842309-116842843	chr7	+	116842315	116842809	True	NR_002332,NR_002331	chr7,chr7	+,-	ST7OT3,ST7OT2	-19631,-56701
chr11:66789973-66790363	chr11	+	66790082	66790400	True	NM_177963,NM_001040716,NM_001177880	chr11,chr11,chr11	+,-,+	SYT12,PC,SYT12	415,-64235,55
chr12:69082774-69083851	chr12	+	69082800	69083620	True	NM_020401,NR_033335	chr12,chr12	+,-	NUP107,SNORA70G	-2128,-61645
chr17:4634362-4634726	chr17	+	4634476	4634756	True	NM_001100812,NM_001136046,NM_032265,NM_001001683,NM_022059	chr17,chr17,chr17,chr17,chr17	-,+,+,+,-	CXCL16,ZMYND15,ZMYND15,MED11,CXCL16	8517,8562,8580,14,8517
chr8:67837877-67838100	chr8	+	67838003	67838101	True	NR_002598,NR_002599,NM_001136160	chr8,chr8,chr8	-,-,+	SNORD87,SNHG6,C8orf45	-3219,-226,-54320
chr16:4899869-4900468	chr16	+	4899977	4900484	True	NM_001079514,NM_016936,NM_032569	chr16,chr16,chr16	+,+,-	UBN1,UBN1,GLYR1	-2122,1592,-2674
chr17:42908754-42909045	chr17	+	42908775	42908917	True	NM_016438,NM_001080383,NM_005497	chr17,chr17,chr17	+,-,-	HIGD1B,GJC1,GJC1	16361,-596,-1168
chr11:4112640-4112979	chr11	+	4112707	4112991	True	NM_001665,NM_001033	chr11,chr11	-,+	RHOG,RRM1	-250494,2932
chr8:19462348-19462801	chr8	+	19462454	19462757	True	NM_001130518,NM_018142	chr8,chr8	-,+	CSGALNACT1,INTS10	-2398,212160
chr3:167497463-167498974	chr3	+	167497598	167499018	True	NM_145859,NM_005025	chr3,chr3	-,+	PDCD10,SERPINI1	-44947,-44140
chr17:43340604-43341103	chr17	+	43340612	43341012	True	NR_024435,NM_152343	chr17,chr17	+,-	LOC100133991,C17orf46	-1105,-1133
chr12:120692645-120692875	chr12	+	120692688	120692908	True	NM_025157,NM_012240	chr12,chr12	-,+	PXN,SIRT4	-4731,47215
chr1:12078205-12078709	chr1	+	12078204	12078345	True	NM_021933,NM_138346	chr1,chr1	+,-	MIIP,KIAA2013	1166,-91719
chr12:52247437-52248396	chr12	+	52247536	52248411	True	NM_001130015,NM_001013690	chr12,chr12	+,-	ANKRD33,FIGNL2	33381,-21835
chrX:13828091-13829493	chrX	+	13828372	13829511	True	NM_001001996,NM_001001995,NM_003611,NM_005278	chrX,chrX,chrX,chrX	-,-,+,-	GPM6B,GPM6B,OFD1,GPM6B	5855,5855,-75591,5855
chr9:139981986-139982319	chr9	+	139982050	139982282	True	NM_016219,NR_027447	chr9,chr9	+,-	MAN1B1,LOC100289341	-684,-781
chr1:231475309-231475828	chr1	+	231475410	231475699	True	NM_032018,NM_175876,NM_001010984	chr1,chr1,chr1	+,-,+	C1orf124,EXOC8,C1orf124	-1779,-1832,-1779
chr4:186394922-186396468	chr4	+	186394933	186396392	True	NM_152775,NM_001114357,NM_001145411	chr4,chr4,chr4	-,+,-	CCDC110,C4orf47,CCDC110	-2020,-44439,-2020
chr17:61629293-61629811	chr17	+	61629490	61629834	True	NM_005828,NM_001915	chr17,chr17	+,-	DCAF7,CYB561	-1719,-105768
chr17:2234369-2235850	chr17	+	2234446	2235850	True	NR_003072,NR_003073,NM_014853,NM_018128,NM_001098509	chr17,chr17,chr17,chr17,chr17	-,-,+,-,+	SNORD91A,SNORD91B,SGSM2,TSR1,SGSM2	-782,-1942,4955,4878,4957
chr8:126103589-126103863	chr8	+	126103594	126103654	True	NM_014846,NM_173685	chr8,chr8	-,+	KIAA0196,NSMCE2	457,428
chr21:44555661-44555915	chr21	+	44555757	44555957	True	NM_006758,NM_000394	chr21,chr21	-,+	U2AF1,CRYAA	-28069,33183
chr10:134739244-134739653	chr10	+	134739425	134739607	True	NM_173572,NM_001083909	chr10,chr10	-,+	C10orf93,GPR123	16532,161801
chr20:42219860-42221070	chr20	+	42219899	42220639	True	NM_016004,NM_001008901	chr20,chr20	+,-	IFT52,GTSF1L	-371,135062
chr17:79478014-79478240	chr17	+	79478019	79478277	True	NM_001077182,NM_001199954,NM_001614,NR_037688	chr17,chr17,chr17,chr17	+,-,-,-	FSCN2,ACTG1,ACTG1,ACTG1	17139,1665,1665,1665
chr3:42307303-42307759	chr3	+	42307337	42307681	True	NM_014965,NM_001174138,NM_000729	chr3,chr3,chr3	+,-,-	TRAK1,CCK,CCK	-105727,-1898,31
chr8:27958859-27960406	chr8	+	27958985	27960013	True	NM_018091,NM_001010906	chr8,chr8	+,-	ELP3,C8orf80	-8453,-17597
chr4:47807007-47808992	chr4	+	47807562	47808992	True	NM_006587,NM_207330	chr4,chr4	-,+	CORIN,NIPAL1	31117,209798
chr6:137145560-137146618	chr6	+	137145827	137146391	True	NM_000288,NM_005923	chr6,chr6	+,-	PEX7,MAP3K5	-2186,-32171
chr1:109793826-109794407	chr1	+	109793837	109794435	True	NM_001408,NM_001005290	chr1,chr1	+,-	CELSR2,PSRC1	-1247,31405
chr9:139556856-139557293	chr9	+	139556856	139557342	True	NM_201446,NM_016215,NR_029695,NM_001012727	chr9,chr9,chr9,chr9	+,+,+,-	EGFL7,EGFL7,MIR126,AGPAT2	34,39,7711,24619
chr1:249119393-249119866	chr1	+	249119431	249119747	True	NR_036070,NM_030645	chr1,chr1	+,-	MIR3124,SH3BP5L	828,457
chr2:226297005-226297461	chr2	+	226297008	226297496	True	NM_014689,NM_020864	chr2,chr2	-,+	DOCK10,KIAA1486	-389678,-31465
chr1:113265098-113265572	chr1	+	113265203	113265507	True	NM_182759,NM_005167,NM_001004440	chr1,chr1,chr1	+,-,+	FAM19A3,PPM1J,FAM19A3	-2065,-7253,-2065
chr2:183372112-183373426	chr2	+	183372157	183373294	True	NM_018981,NM_005019	chr2,chr2	+,-	DNAJC10,PDE1A	207704,14015
chr17:18687886-18688974	chr17	+	18688001	18688864	True	NM_016078,NM_001145045	chr17,chr17	+,-	FAM18B1,ZNF286B	-3470,-102429
chr17:18687886-18688974	chr17	-	15462479	15462959	False	NM_145301,NM_001135036,NR_037924,NM_001204478,NM_001130842	chr17,chr17,chr17,chr17,chr17	-,-,-,-,+	FAM18B2,FAM18B2,FAM18B2-CDRT4,FAM18B2-CDRT4,ZNF286A	4036,4036,4036,4036,139931
chr11:207616-207952	chr11	+	207706	207962	True	NM_016526,NM_001098787,NM_021932	chr11,chr11,chr11	-,-,+	BET1L,BET1L,RIC8A	-284,-284,567
chr5:118325305-118326981	chr5	+	118325392	118326692	True	NM_173666,NR_036263	chr5,chr5	-,+	DTWD2,MIR1244-3	-1152,-15170
chr3:108654257-108655031	chr3	+	108654667	108654810	True	NM_005459,NM_016388	chr3,chr3	-,+	GUCA1C,TRAT1	17926,-113093
chr19:34897014-34897828	chr19	+	34897155	34897732	True	NR_027620,NM_032346	chr19,chr19	-,+	LOC643719,PDCD2L	170919,-1921
chr10:43905481-43905998	chr10	+	43905510	43905864	True	NM_001098206,NR_026693,NM_001098204,NM_001098205,NM_004966	chr10,chr10,chr10,chr10,chr10	-,+,-,-,-	HNRNPF,ZNF487P,HNRNPF,HNRNPF,HNRNPF	-2211,26709,-814,-1178,-854
chr8:10382355-10382573	chr8	+	10382448	10382598	True	NM_001197020,NM_178857,NM_198464	chr8,chr8,chr8	+,-,+	PRSS55,RP1L1,PRSS55	457,130069,457
chr2:75937998-75938257	chr2	+	75938107	75938287	True	NM_001201334,NM_001201335,NM_014763,NM_003203	chr2,chr2,chr2,chr2	-,-,+,-	C2orf3,C2orf3,MRPL19,C2orf3	-375,4,-64249,4
chr10:71893383-71894676	chr10	+	71893580	71894479	True	NM_032797,NM_001198696,NM_018649	chr10,chr10,chr10	-,-,+	AIFM2,AIFM2,H2AFY2	-890,-890,-81274
chr19:43857072-43857272	chr19	+	43857084	43857272	True	NM_020406,NR_026881,NM_002784	chr19,chr19,chr19	+,+,-	CD177,PRG1,PSG9	552,-3927,-83402
chr17:7762582-7762830	chr17	+	7762600	7762878	True	NM_032356,NM_144607,NM_203411	chr17,chr17,chr17	-,+,+	LSMD1,CYB5D1,TMEM88	-1428,-1587,-4267
chr2:238602200-238602574	chr2	+	238602243	238602529	True	NM_001137551,NM_001137552,NM_001137553,NM_004735,NR_033308	chr2,chr2,chr2,chr2,chr2	+,+,+,+,-	LRRFIP1,LRRFIP1,LRRFIP1,LRRFIP1,RAB17	-1487,-1487,-1487,-1487,-102474
chr3:150950975-150951241	chr3	+	150950989	150951249	True	NM_053002,NM_001081455	chr3,chr3	+,-	MED12L,P2RY14	-146364,15799
chr1:156339959-156341815	chr1	+	156340628	156341683	True	NR_036565,NM_020407,NR_026549	chr1,chr1,chr1	-,+,+	CCT3,RHBG,RHBG	-32422,-1676,-1676
chr1:59763349-59764877	chr1	+	59763589	59764858	True	NR_027120,NM_018291,NM_001113411	chr1,chr1,chr1	-,+,+	LOC729467,FGGY,FGGY	-151110,-1023,-1023
chr7:33167436-33167938	chr7	+	33167453	33167897	True	NM_001033605,NM_001033604,NM_014451,NM_203288,NM_198428	chr7,chr7,chr7,chr7,chr7	+,+,+,-,+	BBS9,BBS9,BBS9,RP9,BBS9	1254,1254,1254,-18451,1254
chr19:57995108-57997009	chr19	+	57995481	57996948	True	NM_024691,NM_001144068,NM_001098491,NM_001098493,NM_001098492,NM_001098495,NM_001098494,NM_001098496,NM_001024596	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+,+,+,-	ZNF419,ZNF772,ZNF419,ZNF419,ZNF419,ZNF419,ZNF419,ZNF419,ZNF772	2130,-6543,2130,2130,2130,2130,2130,2130,-6543
chrY:14881884-14882264	chrY	+	14881999	14882086	True	NM_004654,NR_033667	chrY,chrY	+,-	USP9Y,GYG2P1	-68897,-348610
chr14:24398426-24398967	chr14	+	24398441	24398895	True	NR_024081,NM_021004	chr14,chr14	-,+	C14orf165,DHRS4	4932,24069
chr5:176034638-176036507	chr5	+	176034853	176036503	True	NM_001099408,NM_052899	chr5,chr5	+,-	EIF4E1B,GPRIN1	21179,678
chr14:24037662-24039340	chr14	+	24037769	24039329	True	NM_001146028,NR_023314,NM_032452,NM_003917	chr14,chr14,chr14,chr14	-,+,-,-	JPH4,THTPA,JPH4,AP1G2	8730,-12622,8730,-490
chr14:96727084-96727752	chr14	+	96727159	96727627	True	NM_018036,NM_000710	chr14,chr14	-,+	ATG2B,BDKRB1	102102,-4651
chr2:200324666-200325200	chr2	+	200324730	200325225	True	NM_001172509,NM_001172517,NR_026830	chr2,chr2,chr2	-,-,+	SATB2,SATB2,FLJ32063	-1911,4656,7595
chr15:86336670-86337052	chr15	+	86336765	86337095	True	NM_022480,NM_144767	chr15,chr15	-,+	KLHL25,AKAP13	1144,-116548
chr16:47008545-47009048	chr16	+	47008555	47008948	True	NM_005880,NM_001142466	chr16,chr16	-,+	DNAJA2,GPT2	-930,-89504
chr4:144917411-144917638	chr4	+	144917423	144917648	True	NM_002100,NR_003675	chr4,chr4	-,+	GYPB,LOC441046	22898,-436849
chr4:144917411-144917638	chr4	+	144796628	144796678	False	NM_198682,NR_003675	chr4,chr4	-,+	GYPE,LOC441046	30088,-316054
chr1:167484564-167485774	chr1	+	167484625	167485637	True	NM_052862,NM_000734,NM_198053	chr1,chr1,chr1	+,-,-	RCSD1,CD247,CD247	113836,2260,2260
chr22:37608881-37609601	chr22	+	37609118	37609546	True	NM_013385,NM_001051	chr22,chr22	+,-	CYTH4,SSTR3	68948,-765
chr5:133303720-133304066	chr5	+	133303747	133304059	True	NM_003202,NM_020199	chr5,chr5	+,-	TCF7,C5orf15	146342,397
chr11:45115886-45116592	chr11	+	45116038	45116630	True	NM_006034,NM_020229	chr11,chr11	-,+	TP53I11,PRDM11	-143430,-525
chr16:58425500-58426245	chr16	+	58425520	58426228	True	NM_001126130,NM_001126129,NM_022770,NM_001080492	chr16,chr16,chr16,chr16	+,+,+,-	GINS3,GINS3,GINS3,PRSS54	69,69,69,-96569
chr3:32613814-32615150	chr3	+	32614114	32614665	True	NM_016141,NM_015442	chr3,chr3	-,+	DYNC1LI1,CNOT10	-1748,112032
chr2:204004582-204004880	chr2	+	204004693	204004755	True	NM_177538,NM_018256	chr2,chr2	+,-	CYP20A1,WDR12	98408,-227744
chr9:36190501-36190735	chr9	+	36190556	36190630	True	NM_001190383,NM_001184761,NM_001184760,NM_007096,NM_001076677,NM_001184762,NM_001833	chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,+,+,+,+,+,+	GNE,CLTA,CLTA,CLTA,CLTA,CLTA,CLTA	67916,222,222,222,222,222,222
chr2:69666511-69667707	chr2	+	69666596	69667651	True	NM_001002755,NM_001153,NM_001002757,NM_001002756,NM_015700	chr2,chr2,chr2,chr2,chr2	-,+,-,-,-	NFU1,ANXA4,NFU1,NFU1,NFU1	-1843,301475,-1843,-1843,-1843
chr1:203828481-203830194	chr1	+	203829459	203830102	True	NM_003094,NR_027902	chr1,chr1	+,-	SNRPE,C1orf157	637,180341
chr10:112837288-112837584	chr10	+	112837309	112837559	True	NR_026715,NM_000681	chr10,chr10	-,+	RPL13AP6,ADRA2A	-140296,-570
chrY:9162576-9163397	chrY	+	9162627	9163255	True	NR_001546,NR_001547,NM_001164471	chrY,chrY,chrY	-,-,+	TTTY20,RBMY1A3P,TSPY4	9236,-2144,32196
chr20:22559164-22559552	chr20	+	22559236	22559572	True	NM_021784,NM_153675,NR_001558,NM_001052	chr20,chr20,chr20,chr20	-,-,-,+	FOXA2,FOXA2,NCRNA00261,SSTR4	5579,6579,20,456484
chr15:65066306-65066701	chr15	+	65066399	65066725	True	NM_194272,NM_001195059	chr15,chr15	-,+	RBPMS2,PLEKHO2	1095,67356
chr22:24268438-24269094	chr22	+	24268799	24269143	True	NM_001080843,NM_002415	chr22,chr22	-,+	GSTT2B,MIF	34275,-32285
chrX:71457535-71458624	chrX	+	71458125	71458607	True	NM_001170747,NM_017669	chrX,chrX	+,-	PIN4,ERCC6L	-56653,301
chr12:100594900-100595612	chr12	+	100594949	100595457	True	NM_022496,NR_024261	chr12,chr12	+,-	ACTR6,GOLGA2B	-427,-27828
chr15:40397180-40397618	chr15	+	40397222	40397660	True	NM_001003943,NM_001003942,NM_001003940,NM_001211,NM_033503	chr15,chr15,chr15,chr15,chr15	-,-,-,+,-	BMF,BMF,BMF,BUB1B,BMF	677,677,3465,55549,1029
chr7:6681471-6681862	chr7	+	6681568	6681862	True	NM_017560,NM_006956	chr7,chr7	+,-	ZNF853,ZNF12	-26092,64754
chr7:158654077-158655374	chr7	+	158654149	158655116	True	NM_020728,NM_018051	chr7,chr7	-,+	ESYT2,WDR60	-31830,-4931
chr6:27114570-27115043	chr6	+	27114619	27114937	True	NM_080596,NM_003495,NR_036096,NM_080593	chr6,chr6,chr6,chr6	+,+,+,-	HIST1H2AH,HIST1H4I,MIR3143,HIST1H2BK	7,-7583,467,18
chr14:103593721-103593988	chr14	+	103593743	103593943	True	NR_033938,NM_006291	chr14,chr14	-,+	LOC100131366,TNFAIP2	61472,-1130
chr15:49233608-49233998	chr15	+	49233693	49233959	True	NM_014335,NM_203349	chr15,chr15	+,-	EID1,SHC4	-63464,21738
chr11:71254542-71256249	chr11	+	71254647	71256277	True	NM_021046,NM_005553,NM_001005405	chr11,chr11,chr11	+,+,-	KRTAP5-8,KRTAP5-9,KRTAP5-11	-5627,3188,37700
chr6:97049132-97050413	chr6	+	97049242	97050109	True	NM_001143957,NM_020482	chr6,chr6	-,+	GPR63,FHL5	235304,-38876
chr1:173678018-173679380	chr1	+	173678034	173679115	True	NM_198493,NM_014458	chr1,chr1	-,+	ANKRD45,KLHL20	-39033,4964
chr19:5846286-5846936	chr19	+	5846431	5846816	True	NM_001040701,NM_000150,NM_001097641,NM_001097640,NM_000149,NM_001097639,NM_004558	chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,+	FUT6,FUT6,FUT3,FUT3,FUT3,FUT3,NRTN	-6689,-6689,4720,4720,4720,4720,-22671
chr2:72375897-72376146	chr2	+	72375997	72376091	True	NM_019885,NM_001130987	chr2,chr2	-,+	CYP26B1,DYSF	-1034,-682223
chr12:8664138-8665396	chr12	+	8664320	8665414	True	NM_014358,NM_080387	chr12,chr12	-,+	CLEC4E,CLEC4D	28194,721
chr11:65433030-65434231	chr11	+	65433713	65433821	True	NM_021975,NM_153253,NM_001145138	chr11,chr11,chr11	-,+,-	RELA,SIPA1,RELA	-3270,-26178,-3270
chr11:109962950-109963264	chr11	+	109962999	109963283	True	NM_033390,NM_002906	chr11,chr11	+,-	ZC3H12C,RDX	803,204204
chr1:32828103-32828452	chr1	+	32828208	32828452	True	NM_052841,NM_001167676	chr1,chr1	+,-	TSSK3,LOC100128071	-397,-364
chr12:19595264-19596372	chr12	+	19595377	19596358	True	NM_033123,NM_153207,NM_001114176	chr12,chr12,chr12	-,+,+	PLCZ1,AEBP2,AEBP2	-704459,-2827,-2827
chrX:128913587-128913840	chrX	+	128913632	128913766	True	NM_001008222,NM_018990	chrX,chrX	-,+	ZDHHC9,SASH3	63845,125
chr5:111720962-111722783	chr5	+	111721129	111722748	True	NR_027706,NM_022140	chr5,chr5	+,-	FLJ11235,EPB41L4A	32531,32313
chr8:38381861-38382148	chr8	+	38381877	38382103	True	NM_207412,NM_001199660	chr8,chr8	-,+	C8orf86,LETM2	4127,-137279
chr12:116996869-116997118	chr12	+	116996877	116997157	True	NM_001085481,NM_024738	chr12,chr12	+,-	MAP1LC3B2,C12orf49	28,178736
chr11:47271505-47272432	chr11	+	47272043	47272422	True	NM_001130102,NM_001610,NM_001130101,NM_005693,NM_001131064	chr11,chr11,chr11,chr11,chr11	+,-,+,+,-	NR1H3,ACP2,NR1H3,NR1H3,ACP2	-1645,-1586,7074,7074,-1586
chr19:47288112-47289056	chr19	+	47288131	47289047	True	NM_001145144,NM_001145145,NM_005628,NM_024301	chr19,chr19,chr19,chr19	-,-,-,+	SLC1A5,SLC1A5,SLC1A5,FKRP	1548,3,2845,-38879
chr14:51975011-51976503	chr14	+	51975227	51976335	True	NM_001042481,NR_037676	chr14,chr14	+,-	FRMD6,C14orf82	-19423,142187
chr9:97087745-97088002	chr9	+	97087808	97087916	True	NM_017561,NR_033937	chr9,chr9	-,+	FAM22F,LOC100132077	3060,6841
chr9:97087745-97088002	chr9	-	99694303	99694411	False	NM_001170741,NM_001045477,NM_001001662	chr9,chr9,chr9	+,+,-	FAM22G,FAM22G,ZNF782	-3068,-3068,-77914
chr2:224821610-224821945	chr2	+	224821687	224821981	True	NM_022915,NM_020830	chr2,chr2	+,-	MRPL44,WDFY1	139,-11635
chr5:42456640-42457007	chr5	+	42456708	42457008	True	NM_001085486,NM_000163	chr5,chr5	-,+	SEPP1,GHR	355066,-32733
chr12:111287596-111288399	chr12	+	111287658	111288250	True	NM_152591,NM_000432	chr12,chr12	+,-	CCDC63,MYL2	-2900,70204
chr12:133067280-133067494	chr12	+	133067391	133067491	True	NM_001142641,NM_001195520	chr12,chr12	+,-	FBRSL1,LOC645277	-285,119596
chr19:530464-530681	chr19	+	530526	530618	True	NM_182577,NM_004359	chr19,chr19	-,+	ODF3L2,CDC34	-55543,1114
chr2:127866577-127867599	chr2	+	127866642	127867440	True	NM_000312,NM_139350,NM_004305,NM_139347,NM_139346,NM_139345,NM_139344,NM_139343,NM_139351,NM_139349,NM_139348	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-,-,-,-,-,-	PROC,BIN1,BIN1,BIN1,BIN1,BIN1,BIN1,BIN1,BIN1,BIN1,BIN1	308555,-1778,-1778,-1778,-1778,-1778,-1778,-1778,-1778,-1778,-1778
chr22:30442328-30443210	chr22	+	30442402	30443246	True	NM_152510,NM_002309	chr22,chr22	+,-	HORMAD2,LIF	33206,199600
chr7:130021207-130021450	chr7	+	130021213	130021481	True	NM_001868,NM_018718	chr7,chr7	+,-	CPA1,TSGA14	-974,59423
chr21:45934167-45935282	chr21	+	45934463	45935019	True	NR_026548,NR_026547,NM_198691	chr21,chr21,chr21	+,+,-	C21orf90,C21orf90,KRTAP10-1	2078,2078,25109
chr13:33862115-33863741	chr13	+	33862188	33863757	True	NM_004795,NM_178006	chr13,chr13	+,-	KL,STARD13	-271676,-2287
chr1:116659270-116660075	chr1	+	116659295	116660105	True	NM_152367,NM_005599	chr1,chr1	+,-	MAB21L3,NHLH2	-4970,-275548
chr15:25432636-25433021	chr15	+	25432773	25432849	True	NR_003358,NR_003298,NR_003305,NR_003344,NR_003351,NR_003299,NM_130838,NR_003300,NR_003301,NR_003302,NR_003303,NR_003304,NR_003297,NR_003306	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,-,+,+,+,+,+,+,+	SNORD115-43,SNORD115-6,SNORD115-13,SNORD115-29,SNORD115-36,SNORD115-7,UBE3A,SNORD115-8,SNORD115-9,SNORD115-10,SNORD115-11,SNORD115-12,SNORD115-5,SNORD115-14	1711,-7186,5618,1711,1711,-5298,217854,-3377,-2052,-147,1711,-2052,-2049,7218
chr1:158634304-158635038	chr1	+	158634589	158635056	True	NM_001004478,NM_003126	chr1,chr1	+,-	OR10Z1,SPTA1	-58418,21505
chr4:40055921-40057593	chr4	+	40056250	40057535	True	NM_018177,NR_027277	chr4,chr4	+,-	N4BP2,LOC344967	988,1334
chr11:9629237-9629635	chr11	+	9629317	9629410	True	NR_036539,NM_001143976	chr11,chr11	-,+	LOC644656,WEE1	-147072,-33136
chr1:36621315-36621595	chr1	+	36621317	36621525	True	NM_014408,NM_018067	chr1,chr1	-,+	TRAPPC3,MAP7D1	-6250,277
chr20:44601909-44602285	chr20	+	44601913	44602027	True	NM_004994,NM_022095	chr20,chr20	+,-	MMP9,ZNF335	35519,-1080
chr1:53675370-53675795	chr1	+	53675536	53675819	True	NM_000098,NM_017887	chr1,chr1	+,-	CPT2,C1orf123	-13493,10520
chr4:39529067-39529570	chr4	+	39529071	39529607	True	NR_026854,NM_001184701,NM_001184700,NM_003359	chr4,chr4,chr4,chr4	+,-,-,-	LOC401127,UGDH,UGDH,UGDH	-47247,-53,-53,-53
chr17:36980416-36980659	chr17	+	36980477	36980651	True	NM_017748,NM_006148	chr17,chr17	-,+	CWC25,LASP1	988,45460
chr15:50476071-50477985	chr15	+	50476131	50477517	True	NM_003645,NM_001159629,NM_024837	chr15,chr15,chr15	+,+,-	SLC27A2,SLC27A2,ATP8B4	-1791,-1791,-64712
chr4:129728879-129729589	chr4	+	129729023	129729633	True	NM_199320,NM_024900,NM_144643	chr4,chr4,chr4	+,+,-	PHF17,PHF17,SCLT1	1145,1145,285187
chr12:60165807-60167504	chr12	+	60166158	60167217	True	NM_004731,NM_153377	chr12,chr12	+,-	SLC16A7,LRIG3	-83083,-851896
chr8:60016878-60017197	chr8	+	60016965	60017246	True	NM_005625,NM_014729	chr8,chr8	+,-	SDCBP,TOX	-551288,14578
chr12:75903531-75905301	chr12	+	75903647	75905336	True	NM_007043,NM_006851	chr12,chr12	-,+	KRR1,GLIPR1	132,-29193
chrX:140953258-140953815	chrX	+	140953262	140953792	True	NM_138702,NM_145665	chrX,chrX	+,-	MAGEC3,SPANXE	-27211,-166607
chr20:35886415-35886713	chr20	+	35886419	35886679	True	NM_021081,NM_001003897,NM_001184731	chr20,chr20,chr20	-,+,-	GHRH,MANBAL,GHRH	-1120,31371,-1120
chr3:119920128-119921266	chr3	+	119920422	119920980	True	NM_001168271,NM_001168331	chr3,chr3	-,+	GPR156,NDUFB4	42219,394147
chr1:156050244-156051238	chr1	+	156050449	156051129	True	NM_001093725,NM_020387	chr1,chr1	-,+	MEX3A,RAB25	710,-19534
chr19:50369673-50369962	chr19	+	50369775	50369943	True	NM_001168222,NM_007254	chr19,chr19	+,-	TBC1D17,PNKP	10738,931
chr11:775871-776393	chr11	+	775871	776375	True	NM_006755,NM_182612	chr11,chr11	+,-	TALDO1,PDDC1	-28499,1162
chr5:173142757-173144107	chr5	+	173142930	173143912	True	NR_027109,NM_138369	chr5,chr5	+,-	LOC285593,BOD1	-136324,-99264
chr1:233430167-233430823	chr1	+	233430188	233430846	True	NM_032435,NM_014801	chr1,chr1	+,-	KIAA1804,PCNXL2	32667,663
chr2:34114693-34116162	chr2	+	34114826	34116104	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-375935,-161542
chr22:40389139-40390534	chr22	+	40389401	40390267	True	NM_152512,NM_138435	chr22,chr22	-,+	ENTHD1,FAM83F	-99607,685
chr16:70322591-70322949	chr16	+	70322788	70322972	True	NM_001014449,NM_001605	chr16,chr16	+,-	DDX19B,AARS	10099,490
chrY:24063155-24064125	chrY	+	24063660	24063738	True	NM_001006120,NM_001006121,NR_001527,NM_001006118	chrY,chrY,chrY,chrY	-,-,+,-	RBMY1D,RBMY1B,TTTY6,RBMY1E	488,528,227373,488
chrY:24063155-24064125	chrY	+	24040119	24040197	False	NM_001006120,NM_005058,NR_001527,NM_001006121,NM_001006118	chrY,chrY,chrY,chrY,chrY	-,-,+,-,-	RBMY1D,RBMY1A1,TTTY6,RBMY1B,RBMY1E	488,494,250914,528,488
chrY:24063155-24064125	chrY	-	23673699	23673777	False	NM_001006120,NM_005058,NR_001537,NM_001006121,NM_001006118	chrY,chrY,chrY,chrY,chrY	+,+,-,+,+	RBMY1D,RBMY1A1,TTTY13,RBMY1B,RBMY1E	-494,-500,82835,-534,-494
chrY:24063155-24064125	chrY	-	23697240	23697318	False	NM_001006120,NM_005058,NR_001537,NM_001006121	chrY,chrY,chrY,chrY	+,+,-,+	RBMY1D,RBMY1A1,TTTY13,RBMY1B	-494,-500,59294,-534
chr1:33338156-33338843	chr1	+	33338215	33338699	True	NM_001171941,NM_001171940,NM_153756,NM_002143	chr1,chr1,chr1,chr1	-,-,-,+	FNDC5,FNDC5,FNDC5,HPCA	-133,-1801,-1801,13398
chr5:758608-759099	chr5	+	758852	759148	True	NM_001166260,NM_007030	chr5,chr5	+,-	TRIP13,TPPP	133820,-65342
chr6:3160028-3160237	chr6	+	3160071	3160191	True	NM_001069,NR_026650	chr6,chr6	-,+	TUBB2A,BPHL	-2288,-41205
chr20:43992959-43993202	chr20	+	43992959	43993101	True	NM_014477,NM_033542,NR_003189,NM_001099791,NM_001197129	chr20,chr20,chr20,chr20,chr20	-,+,+,+,+	TP53TG5,SYS1,SYS1-DBNDD2,SYS1,SYS1	13906,-1270,-1201,-1270,-2433
chr19:5718411-5718870	chr19	+	5718576	5718919	True	NM_152784,NM_004793	chr19,chr19	+,-	TMEM146,LONP1	1768,1307
chr16:19729934-19730138	chr16	+	19729983	19730129	True	NM_153208,NM_001012991	chr16,chr16	+,-	IQCK,C16orf88	-2256,-491
chr12:6810366-6811104	chr12	+	6810533	6811134	True	NM_001164094,NM_153685	chr12,chr12	+,-	COPS7A,C12orf53	22015,-721
chr14:70535534-70536167	chr14	+	70535788	70536186	True	NM_022137,NM_182936	chr14,chr14	+,-	SMOC1,SLC8A3	-189725,10782
chr17:71161848-71162095	chr17	+	71161848	71162036	True	NM_001098832,NM_001050	chr17,chr17	-,+	FAM104A,SSTR2	66547,-739
chr7:144053029-144053321	chr7	+	144053039	144053369	True	NM_005435,NM_001080413	chr7,chr7	+,-	ARHGEF5,NOBOX	-609,47467
chr7:144053029-144053321	chr7	-	143891855	143892185	False	NM_001003702,NM_198495	chr7,chr7	-,+	ARHGEF35,CTAGE4	664,-11358
chr7:144053029-144053321	chr7	-	143990435	143990765	False	NR_002158,NR_033942,NR_002157	chr7,chr7,chr7	+,-,+	OR2A20P,LOC728377,OR2A9P	5700,-7339,5848
chr16:3032767-3033655	chr16	+	3033161	3033639	True	NR_033861,NM_004203,NM_182687	chr16,chr16,chr16	+,-,-	LOC283875,PKMYT1,PKMYT1	5415,-2621,-2621
chr21:34862506-34862990	chr21	+	34862712	34862799	True	NM_032195,NM_001040192,NM_017833	chr21,chr21,chr21	+,-,-	SON,DNAJC28,DNAJC28	52550,1277,1044
chr18:21017969-21018447	chr18	+	21018125	21018498	True	NM_003831,NM_032933	chr18,chr18	+,-	RIOK3,C18orf45	14288,-200
chr17:39637020-39637323	chr17	+	39637031	39637349	True	NM_005801,NM_003771,NM_002280	chr17,chr17,chr17	+,-,-	EIF1,KRT36,KRT35	207777,8817,93
chr17:71233496-71235234	chr17	+	71233658	71234973	True	NM_032837,NM_001100621,NM_001100622,NM_001098832,NM_017941	chr17,chr17,chr17,chr17,chr17	-,+,+,-,+	FAM104A,C17orf80,C17orf80,FAM104A,C17orf80	-5125,-4933,-4933,-5125,-4933
chr13:29232101-29232719	chr13	+	29232206	29232668	True	NM_001135919,NM_015932	chr13,chr13	-,+	SLC46A3,POMP	60534,472
chr16:50121960-50122849	chr16	+	50122112	50122780	True	NM_182922,NM_015069	chr16,chr16	+,-	HEATR3,ZNF423	-22289,-261194
chrY:10033130-10033468	chrY	+	10033274	10033456	True	NR_003593,NR_003589	chrY,chrY	+,-	TTTY23B,TTTY1B	-284918,-421346
chr1:67268051-67270041	chr1	+	67268256	67269864	True	NM_005478,NM_152665	chr1,chr1	-,+	INSL5,TCTEX1D1	-1314,-50175
chr2:85639039-85639355	chr2	+	85639206	85639353	True	NM_001747,NM_198482	chr2,chr2	-,+	CAPG,SH2D6	-1530,22564
chr2:86115477-86115695	chr2	+	86115578	86115658	True	NM_003896,NM_032827	chr2,chr2	-,+	ST3GAL5,ATOH8	549,-134720
chr11:123066601-123066877	chr11	+	123066632	123066792	True	NR_027288,NM_024769	chr11,chr11	+,-	LOC341056,CLMP	-178409,-625
chr3:121741174-121742494	chr3	+	121741244	121742450	True	NM_175924,NM_175862,NM_001199800,NM_001199799	chr3,chr3,chr3,chr3	-,+,-,-	ILDR1,CD86,ILDR1,ILDR1	-117,31770,-117,-117
chrX:13829493-13830327	chrX	+	13829509	13830144	True	NM_001001996,NM_001001995,NM_003611,NM_005278	chrX,chrX,chrX,chrX	-,-,+,-	GPM6B,GPM6B,OFD1,GPM6B	5221,5221,-76739,5221
chr7:44079228-44079526	chr7	+	44079415	44079505	True	NR_024116,NM_001014436,NM_001122956,NR_015401,NM_014063,NR_024416	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,+,+	RASA4P,DBNL,DBNL,FLJ35390,DBNL,FLJ35390	767,4733,4733,-769,4733,-400
chr7:44079228-44079526	chr7	+	102134569	102134659	False	NM_006234,NM_152892	chr7,chr7	-,+	POLR2J,LRWD1	-15188,-29231
chr7:44079228-44079526	chr7	+	102233738	102233828	False	NM_001166339,NM_001097615	chr7,chr7	+,-	SPDYE2L,POLR2J3	-42111,-20670
chr7:44079228-44079526	chr7	+	102329648	102329738	False	NM_032959,NM_001166339	chr7,chr7	-,+	POLR2J2,SPDYE2L	-17466,-38928
chr2:231901028-231902095	chr2	+	231901150	231902003	True	NR_033879,NM_001144994	chr2,chr2	-,+	LOC348761,C2orf72	-40403,277
chrX:110212602-110214483	chrX	+	110212912	110214535	True	NM_001128167,NM_001143983	chrX,chrX	+,-	PAK3,CHRDL1	-25452,-173626
chr12:95379783-95380857	chr12	+	95379933	95380679	True	NR_036685,NM_018838	chr12,chr12	+,-	KRT19P2,NDUFA12	-151755,16891
chr13:109295059-109295762	chr13	+	109295088	109295751	True	NM_001098268,NM_001198950	chr13,chr13	-,+	LIG4,MYO16	-424372,-13580
chr1:1953814-1954120	chr1	+	1954047	1954170	True	NM_000815,NM_001080484	chr1,chr1	+,-	GABRD,KIAA1751	-3330,-18771
chr16:1846425-1846822	chr16	+	1846446	1846528	True	NM_001146006,NR_027389,NM_012225,NM_004970	chr16,chr16,chr16,chr16	-,-,+,-	IGFALS,IGFALS,NUBP2,IGFALS	-2712,-1537,-13575,-2712
chrX:49842143-49843570	chrX	+	49842155	49843411	True	NM_139289,NM_000084	chrX,chrX	-,+	AKAP4,CLCN5	121650,-9999
chr5:34005897-34006703	chr5	+	34005926	34006746	True	NM_001167598,NM_001167595,NM_001167597,NM_001167596,NM_014324,NM_016568,NM_203382	chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,-,+,-	AMACR,AMACR,AMACR,AMACR,AMACR,RXFP3,AMACR	1524,1524,1524,1524,1524,-69486,1524
chr9:79633903-79634184	chr9	+	79633909	79634179	True	NM_015225,NM_001013735	chr9,chr9	-,+	PRUNE2,FOXB2	-112906,391
chr1:247723456-247725182	chr1	+	247723463	247725162	True	NM_198074,NM_145278	chr1,chr1	-,+	OR2C3,C1orf150	-26322,-11063
chr22:31090431-31090674	chr22	+	31090504	31090710	True	NM_152511,NM_030758	chr22,chr22	-,+	DUSP18,OSBP2	-26632,82
chr1:36566158-36566585	chr1	+	36566192	36566486	True	NM_005202,NM_017825	chr1,chr1	-,+	COL8A2,ADPRHL2	-342,-11790
chr22:36640924-36641789	chr22	+	36641084	36641820	True	NM_003661,NM_001136540,NM_001136541,NM_030882,NM_145343,NM_145637	chr22,chr22,chr22,chr22,chr22,chr22	+,+,+,-,+,-	APOL1,APOL1,APOL1,APOL2,APOL1,APOL2	7296,7296,7296,-5395,7296,-5084
chr7:56183073-56183669	chr7	+	56183508	56183610	True	NM_015411,NM_001145712,NM_016139	chr7,chr7,chr7	+,-,-	SUMF2,LOC389493,CHCHD2	-51642,530,-9321
chr9:134365563-134366839	chr9	+	134365846	134366758	True	NR_003050,NR_002914,NM_001135954	chr9,chr9,chr9	+,+,-	SNORD62B,SNORD62A,UCK1	-24,-24,39954
chr22:39183337-39183919	chr22	+	39183603	39183729	True	NM_005740,NM_004286	chr22,chr22	-,+	DNAL4,GTPBP1	6482,-81848
chr19:9939164-9939391	chr19	+	9939195	9939361	True	NM_001048241,NM_024292,NM_006221,NM_017703	chr19,chr19,chr19,chr19	+,+,+,-	UBL5,UBL5,PIN1,FBXL12	-678,-678,6637,-9464
chr1:63152744-63153536	chr1	+	63152968	63153326	True	NM_033407,NM_014495	chr1,chr1	-,+	DOCK7,ANGPTL3	693,-89832
chr12:51478509-51479069	chr12	+	51478694	51479112	True	NM_030809,NM_015416	chr12,chr12	-,+	CSRNP2,LETMD1	-1361,-36661
chr9:95619939-95621127	chr9	+	95619944	95620859	True	NM_001007101,NR_026868	chr9,chr9	-,+	ZNF484,ANKRD19	19468,-48102
chr1:161690207-161691431	chr1	+	161690489	161691403	True	NM_001002901,NR_002595	chr1,chr1	+,-	FCRLB,RPL31P11	1053,-35447
chr17:9548322-9548739	chr17	+	9548533	9548623	True	NM_153210,NR_033656	chr17,chr17	+,-	USP43,STX8	326,-69258
chr2:42588400-42588640	chr2	+	42588407	42588679	True	NM_019063,NM_004718	chr2,chr2	+,-	EML4,COX7A2L	-191968,-51
chr4:95372282-95372928	chr4	+	95372288	95372890	True	NM_001011513,NM_001011516,NM_001011515,NM_014485,NM_006457,NR_024179	chr4,chr4,chr4,chr4,chr4,chr4	+,+,+,-,+,+	PDLIM5,PDLIM5,PDLIM5,HPGDS,PDLIM5,PDLIM5	147,147,147,-108261,147,147
chr17:72745493-72745821	chr17	+	72745547	72745695	True	NM_004252,NM_015654,NR_037409	chr17,chr17,chr17	+,-,+	SLC9A3R1,NAT9,MIR3615	-835,26825,-846
chr11:6505615-6507557	chr11	+	6505698	6507592	True	NM_012192,NM_012402	chr11,chr11	+,-	FXC1,ARFIP2	-3072,-3103
chr1:207820430-207821509	chr1	+	207820436	207821254	True	NM_175710,NR_029832	chr1,chr1	+,-	CR1L,MIR29C	-2040,154082
chr6:159274950-159276631	chr6	+	159275054	159276249	True	NR_028496,NM_001195032	chr6,chr6	-,+	OSTCL,C6orf99	2475,33369
chr1:215213245-215214096	chr1	+	215213268	215214120	True	NM_001017424,NM_005401	chr1,chr1	+,-	KCNK2,PTPN14	-34447,-488244
chr16:57651017-57651742	chr16	+	57651050	57651726	True	NM_001145770,NM_005682,NM_033212	chr16,chr16,chr16	+,+,-	GPR56,GPR56,CCDC102A	2183,2183,-80573
chr2:240971263-240971869	chr2	+	240971288	240971833	True	NM_001005853,NR_037808,NM_004544	chr2,chr2,chr2	-,+,-	OR6B2,LOC150935,NDUFA10	-1442,-286785,-6469
chr19:53141022-53141370	chr19	+	53141306	53141374	True	NM_001105551,NM_001105550,NM_001105553,NM_001105552,NM_001105554,NM_018300,NR_023311,NM_001105549	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,+,-	ZNF83,ZNF83,ZNF83,ZNF83,ZNF83,ZNF83,ZNF137P,ZNF83	320,320,320,320,320,320,-41420,320
chr1:17307771-17308426	chr1	+	17307832	17308376	True	NM_014675,NM_002403,NM_001135248,NM_001135247,NM_017459	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	CROCC,MFAP2,MFAP2,MFAP2,MFAP2	-59439,-659,-659,27,27
chr11:57298343-57299832	chr11	+	57298439	57299724	True	NM_012456,NM_001105565	chr11,chr11	-,+	TIMM10,SMTNL1	-207,10389
chr8:145643642-145644023	chr8	+	145643702	145644006	True	NM_174922,NM_130849,NM_183057,NM_017767,NM_013291,NM_016208	chr8,chr8,chr8,chr8,chr8,chr8	+,-,-,-,-,-	ADCK5,SLC39A4,VPS28,SLC39A4,CPSF1,VPS28	-46022,-1429,9971,-1785,-8969,9971
chr11:58723239-58724250	chr11	+	58723318	58724238	True	NR_033853,NM_080661	chr11,chr11	-,+	LOC283194,GLYATL1	101737,-12650
chr5:140990529-140991572	chr5	+	140990943	140991364	True	NM_005219,NM_001130029,NM_001079812	chr5,chr5,chr5	-,+,-	DIAPH1,RELL2,DIAPH1	7311,25152,7311
chr15:25481709-25483086	chr15	+	25481820	25482856	True	NR_003353,NR_003358,NR_003357,NR_003346,NR_003344,NR_003352,NR_003351,NR_003350,NM_130838,NR_003356,NR_003355,NR_003354,NR_003347,NR_003302,NR_003303,NR_003348,NR_003349	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,-,+,+,+,+,+,+,+,+	SNORD115-38,SNORD115-43,SNORD115-42,SNORD115-31,SNORD115-29,SNORD115-37,SNORD115-36,SNORD115-35,UBE3A,SNORD115-41,SNORD115-40,SNORD115-39,SNORD115-32,SNORD115-10,SNORD115-11,SNORD115-33,SNORD115-34	2128,-639,9635,-9615,-639,276,-639,-2477,167847,7768,5904,4036,-7757,9635,-639,-5886,-4337
chr2:9347472-9347698	chr2	+	9347478	9347564	True	NM_003887,NM_001135191,NM_138799	chr2,chr2,chr2	+,+,-	ASAP2,ASAP2,MBOAT2	-635,-635,-203602
chr19:3556333-3557046	chr19	+	3556339	3556977	True	NM_001042680,NM_021731,NM_006339,NM_174983	chr19,chr19,chr19,chr19	-,-,+,-	C19orf28,C19orf28,HMG20B,C19orf28	644,644,15965,644
chr7:116311376-116311613	chr7	+	116311375	116311617	True	NM_000245,NR_002330,NM_001127500	chr7,chr7,chr7	+,-,+	MET,ST7OT1,MET	841,282821,841
chr7:93193855-93195692	chr7	+	93194077	93195716	True	NM_017667,NM_001164737,NM_001164738,NM_001742	chr7,chr7,chr7,chr7	+,-,-,-	CCDC132,CALCR,CALCR,CALCR	-332476,8376,-4955,8376
chr17:21158784-21159417	chr17	+	21158879	21159291	True	NM_152914,NM_145109	chr17,chr17	-,+	C17orf103,MAP2K3	-2301,28676
chr12:133757994-133758266	chr12	+	133758052	133758314	True	NM_001191054,NM_152943,NM_003415,NM_001165885,NM_001165884,NM_001165887,NM_001165886,NM_001165881,NM_001165883	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,+,+,+,+,+,+	LOC647589,ZNF268,ZNF268,ZNF268,ZNF268,ZNF268,ZNF268,ZNF268,ZNF268	54158,-108,-108,-108,-108,-108,-108,-43,-108
chr19:56984636-56985874	chr19	+	56984707	56985827	True	NR_036521,NR_036522,NM_022103,NR_030740	chr19,chr19,chr19,chr19	+,+,-,-	LOC100128252,LOC100128252,ZNF667,ZNF667	3415,3665,2993,2993
chr9:39742636-39743622	chr9	+	39742934	39743667	True	NR_003528,NM_001085452	chr9,chr9	-,+	LOC653501,FAM75A1	-278408,141307
chr9:39742636-39743622	chr9	+	39213729	39214465	False	NM_033655,NM_001085452	chr9,chr9	-,+	CNTNAP3,FAM75A1	73885,141233
chr7:18535583-18535784	chr7	+	18535583	18535833	True	NM_175886,NM_178423,NM_178425,NM_001204145,NM_001204146,NM_014707,NM_058176	chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,+,+,+	PRPS1L1,HDAC9,HDAC9,HDAC9,HDAC9,HDAC9,HDAC9	-468097,-265,51,-265,-265,-265,51
chr9:37034815-37035053	chr9	+	37034990	37035094	True	NM_016734,NR_036592	chr9,chr9	-,+	PAX5,LOC100506710	-514,44798
chr4:70615501-70617260	chr4	+	70615671	70617131	True	NM_014465,NM_001025104	chr4,chr4	-,+	SULT1B1,CSN1S1	9359,179667
chr22:32648071-32649403	chr22	+	32648235	32649374	True	NM_014227,NM_006604	chr22,chr22	-,+	SLC5A4,RFPL3	1995,101497
chr13:47065142-47065596	chr13	+	47065142	47065491	True	NM_001164211,NM_025113	chr13,chr13	+,-	LRCH1,C13orf18	61804,-103507
chr3:157840927-157842012	chr3	+	157841447	157842013	True	NM_016625,NM_006884	chr3,chr3	+,-	RSRC1,SHOX2	-13617,-17495
chr17:6460626-6462499	chr17	+	6460699	6462446	True	NM_001165966,NM_031220,NM_032731	chr17,chr17,chr17	-,-,+	PITPNM3,PITPNM3,TXNDC17	-822,-822,81775
chr17:79267143-79267989	chr17	+	79267180	79267750	True	NM_001037984,NM_138570,NM_001086521	chr17,chr17,chr17	-,-,+	SLC38A10,SLC38A10,C17orf89	1408,1408,-54120
chr6:62987540-62988921	chr6	+	62987572	62988689	True	NM_001190706,NM_152688	chr6,chr6	+,-	MTRNR2L9,KHDRBS2	-703628,7461
chr4:88936655-88937075	chr4	+	88936850	88937054	True	NM_000297,NM_004827	chr4,chr4	+,-	PKD2,ABCG2	-8107,143015
chr19:44038050-44038262	chr19	+	44038050	44038310	True	NM_014297,NM_174945	chr19,chr19	-,+	ETHE1,ZNF575	-6654,-761
chr3:33264813-33265613	chr3	+	33264823	33265639	True	NM_012157,NM_015551	chr3,chr3	+,-	FBXL2,SUSD5	53294,-4116
chr19:35758464-35758683	chr19	+	35758586	35758678	True	NM_003367,NM_207291,NM_152481	chr19,chr19,chr19	+,+,-	USF2,USF2,FAM187B	1217,1217,-38958
chr20:1877091-1877790	chr20	+	1877260	1877772	True	NM_080792,NM_001190892,NM_001040023,NM_001040022	chr20,chr20,chr20,chr20	+,-,+,+	SIRPA,PDYN,SIRPA,SIRPA	-1886,95730,-1485,-2498
chr1:161197083-161197388	chr1	+	161197171	161197427	True	NM_001643,NM_032174	chr1,chr1	-,+	APOA2,TOMM40L	-3753,-1389
chr4:4863102-4863317	chr4	+	4863133	4863350	True	NM_002448,NM_018659	chr4,chr4	+,-	MSX1,CYTL1	-1793,157897
chr6:14930682-14932546	chr6	+	14930708	14932206	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	314320,731133
chr16:2248227-2249602	chr16	+	2248434	2249268	True	NM_001199174,NM_001199175,NM_020764,NM_001199173,NM_022372	chr16,chr16,chr16,chr16,chr16	+,+,-,+,+	MLST8,MLST8,CASKIN1,MLST8,MLST8	6463,5909,-1969,5909,5909
chr19:34857002-34857713	chr19	+	34857008	34857762	True	NR_027620,NM_001184722,NM_000175	chr19,chr19,chr19	-,+,+	LOC643719,GPI,GPI	210884,-1414,-1027
chr3:9748062-9749929	chr3	+	9748062	9749976	True	NM_003656,NM_153635	chr3,chr3	-,+	CAMK1,CPNE9	61744,-2614
chr7:132260303-132260521	chr7	+	132260383	132260507	True	NM_001037126,NM_001105543,NM_020911	chr7,chr7,chr7	+,-,-	EXOC4,PLXNA4,PLXNA4	677315,866,866
chr1:153748578-153748787	chr1	+	153748622	153748822	True	NM_024330,NM_004515	chr1,chr1	+,-	SLC27A3,ILF2	-905,-105143
chr8:144661898-144662164	chr8	+	144661901	144662213	True	NM_145201,NM_001100878,NM_032862	chr8,chr8,chr8	-,-,+	NAPRT1,C8orf73,TIGD5	-1388,-6973,17860
chr6:72594915-72596074	chr6	+	72595128	72595959	True	NR_026807,NM_014989	chr6,chr6	-,+	C6orf155,RIMS1	-464680,690
chr8:6739146-6739429	chr8	+	6739183	6739447	True	NM_005218,NM_018361	chr8,chr8	-,+	DEFB1,AGPAT5	-3654,-173363
chr15:78425054-78426465	chr15	+	78425129	78426404	True	NM_006383,NM_005530	chr15,chr15	-,+	CIB2,IDH3A	-1251,15314
chr22:39407638-39408854	chr22	+	39407929	39408764	True	NM_014292,NM_014508,NM_175709,NM_152426	chr22,chr22,chr22,chr22	-,+,-,+	CBX6,APOBEC3C,CBX7,APOBEC3D	-139671,1500,139824,8353
chr10:11867298-11868404	chr10	+	11867358	11868214	True	NM_014688,NM_153256	chr10,chr10	-,+	USP6NL,C10orf47	-213679,-2012
chr19:1952509-1952713	chr19	+	1952577	1952729	True	NR_033400,NM_001319	chr19,chr19	-,+	C19orf34,CSNK1G2	1869,-11471
chr4:152678922-152679922	chr4	+	152679163	152679704	True	NM_004564,NM_001109977	chr4,chr4	-,+	PET112L,FAM160A1	2533,-348817
chr3:118844069-118844555	chr3	+	118844095	118844169	True	NM_152539,NM_152538	chr3,chr3	+,-	C3orf30,IGSF11	20827,20779
chr5:110428459-110428738	chr5	+	110428592	110428772	True	NM_139281,NM_001039763	chr5,chr5	+,-	WDR36,TMEM232	-779,-366142
chr19:34894485-34894919	chr19	+	34894657	34894836	True	NR_027620,NM_032346	chr19,chr19	-,+	LOC643719,PDCD2L	173817,466
chr17:62834383-62835307	chr17_ctg5_hap1	+	184482	185182	False	NM_014798,NR_027774,NR_027782,NM_001113738	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	-,-,-,+	PLEKHM1,PLEKHM1,PLEKHM1,ARL17A	-1268,-1268,-1268,10538
chr17:62834383-62835307	chr17	+	62834578	62835281	True	NR_024386,NM_001165933	chr17,chr17	-,+	PLEKHM1P,RGS9	-1276,298174
chr17:62834383-62835307	chr17	+	43569412	43570112	False	NR_037772,NM_014798,NR_027774,NR_027782	chr17,chr17,chr17,chr17	+,-,-,-	CRHR1,PLEKHM1,PLEKHM1,PLEKHM1	127597,-1266,-1266,-1266
chr10:88833977-88835398	chr10	+	88834264	88835281	True	NM_005271,NM_019054	chr10,chr10	-,+	GLUD1,FAM35A	19551,19671
chr3:10330985-10331445	chr3	+	10331079	10331467	True	NM_001134941,NM_001134946,NM_001134944,NM_001134945,NR_026829,NR_024138,NR_004431,NR_024146,NM_016362,NR_024145,NR_024144,NR_024132,NR_024133,NR_024134,NR_024135,NR_024136,NR_024137	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,+,-,+,+,-,+,+,-,-,-,-,-,-	GHRL,GHRL,GHRL,GHRL,C3orf42,GHRL,GHRLOS,GHRLOS,GHRL,GHRLOS,GHRLOS,GHRL,GHRL,GHRL,GHRL,GHRL,GHRL	1002,3214,3214,3214,-5027,3214,-3692,-3692,1002,-3692,-3692,3214,3214,3214,3214,3214,3214
chr5:148961433-148961705	chr5	+	148961472	148961734	True	NM_001892,NM_001001669	chr5,chr5	-,+	CSNK1A1,ARHGEF37	-30465,-401
chr4:76911358-76911847	chr4	+	76911380	76911884	True	NM_018115,NM_001130017	chr4,chr4	-,+	SDAD1,ART3	279,20452
chr16:56618158-56619098	chr16	+	56618375	56619025	True	NM_005954,NM_031885	chr16,chr16	+,-	MT3,BBS2	4241,-64367
chr1:110221116-110221947	chr1	+	110221446	110221774	True	NM_000561,NM_000849,NM_146421	chr1,chr1,chr1	+,-,+	GSTM1,GSTM3,GSTM1	8643,61948,8643
chr12:49580427-49581032	chr12	+	49580759	49581055	True	NM_006009,NM_032704	chr12,chr12	-,+	TUBA1A,TUBA1C	1860,77809
chr16:89558662-89558977	chr16	+	89558661	89558973	True	NM_199367,NM_013275	chr16,chr16	+,-	SPG7,ANKRD11	15831,-1692
chr16:30197664-30198728	chr16	+	30197911	30198595	True	NR_037608,NR_037609,NM_001014999,NM_007074,NM_001015000,NM_024044,NM_001031827,NR_002454,NM_001039182,NM_178044,NM_001193333	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,+,-,+,-,+,+	SLX1A-SULT1A3,SLX1B-SULT1A4,SLX1A,CORO1A,SLX1A,SLX1B,BOLA2,LOC606724,BOLA2B,SLX1B,CORO1A	7158,7158,6568,-3231,6568,6568,7082,1409,7082,6568,-3231
chrX:51484791-51485701	chrX	+	51484802	51485695	True	NR_033773,NM_018094	chrX,chrX	-,+	LOC441495,GSPT2	-59355,785
chr11:116959313-116959841	chr11	+	116959320	116959821	True	NM_025164,NM_002572	chr11,chr11	-,+	SIK3,PAFAH1B2	9231,55178
chr12:95949239-95949707	chr12	+	95949396	95949719	True	NM_032147,NM_006838,NM_001042403	chr12,chr12,chr12	-,+,-	USP44,METAP2,USP44	-4133,-81636,-6776
chr3:179041539-179041741	chr3	+	179041548	179041798	True	NM_016331,NM_171828	chr3,chr3	+,-	ZNF639,KCNMB3	-48,-56710
chr22:50173103-50173532	chr22	+	50173111	50173487	True	NM_014838,NR_026993	chr22,chr22	+,-	ZBED4,LOC90834	74009,521
chr8:74213578-74213913	chr8	+	74213628	74213721	True	NM_000971,NM_172037	chr8,chr8	-,+	RPL7,RDH10	-7759,-6424
chr2:211179194-211179699	chr2	+	211179235	211179654	True	NM_079420,NM_001122633	chr2,chr2	-,+	MYL1,CPS1	300,162751
chr10:5731418-5733008	chr10	+	5732305	5732816	True	NM_017782,NR_037164	chr10,chr10	+,-	C10orf18,ASB13	-5560,-23747
chr22:31687873-31688152	chr22	+	31688051	31688183	True	NM_001135911,NM_052880,NM_016733	chr22,chr22,chr22	-,-,+	PIK3IP1,PIK3IP1,LIMK2	387,387,-43754
chr1:249120191-249120470	chr1	+	249120271	249120455	True	NR_036070,NM_030645	chr1,chr1	+,-	MIR3124,SH3BP5L	120,-117
chr4:169351979-169352247	chr4	+	169352131	169352295	True	NM_001012967,NM_001166108	chr4,chr4	-,+	DDX60L,PALLD	49395,65921
chr16:23463969-23464223	chr16	+	23464060	23464270	True	NM_019116,NM_153603	chr16,chr16	+,-	UBFD1,COG7	104591,292
chr1:245318906-245319149	chr1	+	245319001	245319159	True	NM_018012,NM_031844	chr1,chr1	+,-	KIF26B,HNRNPU	-765,-291174
chr5:154235446-154235830	chr5	+	154235577	154235831	True	NM_032385,NM_004779	chr5,chr5	-,+	C5orf4,CNOT8	-5364,2366
chr15:74372978-74373336	chr15	+	74373025	74373164	True	NM_001130136,NM_001038640	chr15,chr15	+,-	ISLR2,GOLGA6A	48550,1778
chr15:74372978-74373336	chr15	+	78217386	78217485	False	NM_001101404,NR_027024	chr15,chr15	+,-	SH2D7,LOC645752	167441,1754
chr15:74372978-74373336	chr15	-	72948764	72948903	False	NR_002780,NM_018652	chr15,chr15	-,+	HIGD2B,GOLGA6B	29637,-1778
chr15:74372978-74373336	chr15	-	75576902	75577041	False	NR_030360,NM_001145224	chr15,chr15	-,+	MIR631,GOLGA6D	69035,-1772
chr15:74372978-74373336	chr15	-	75552625	75553028	False	NR_030360,NM_001164404	chr15,chr15	-,+	MIR631,GOLGA6C	93312,-1778
chr8:20056936-20057280	chr8	+	20056935	20057115	True	NM_001693,NM_003053	chr8,chr8	+,-	ATP6V1B2,SLC18A1	-2288,-16218
chr14:55506468-55507182	chr14	+	55506632	55507128	True	NM_007086,NM_144578	chr14,chr14	-,+	WDHD1,MAPK1IP1L	-12813,11233
chr14:97330225-97330873	chr14	+	97330253	97330907	True	NM_003384,NM_018036	chr14,chr14	+,-	VRK1,ATG2B	-66622,-500575
chr19:30158274-30158625	chr19	+	30158320	30158672	True	NM_001031726,NM_024310	chr19,chr19	-,+	C19orf12,PLEKHF1	47341,-2044
chr17:39645985-39646296	chr17	+	39646155	39646235	True	NM_005801,NM_003771,NM_002280	chr17,chr17,chr17	+,-,-	EIF1,KRT36,KRT35	198891,-39,-8763
chr1:7845655-7846170	chr1	+	7845658	7846028	True	NM_006786,NM_016831	chr1,chr1	-,+	UTS2,PER3	67134,-946
chr3:73049256-73051071	chr3	+	73049680	73050316	True	NM_174907,NM_018130	chr3,chr3	+,-	PPP4R2,SHQ1	-3613,-152082
chr7:1784236-1784585	chr7	+	1784402	1784558	True	NM_001134340,NM_001128636	chr7,chr7	-,+	PSMG3,ELFN1	-174734,-35655
chr1:212457761-212458127	chr1	+	212457766	212458052	True	NM_006243,NM_001198862	chr1,chr1	+,-	PPP2R5A,TMEM206	826,130241
chr21:35880762-35881575	chr21	+	35881047	35881529	True	NM_000219,NM_058182	chr21,chr21	-,+	KCNE1,FAM165B	2136,-133361
chr13:28240080-28241815	chr13	+	28240165	28241247	True	NM_015972,NM_153371	chr13,chr13	+,-	POLR1D,LNX2	-44187,-45445
chr1:154934948-154935579	chr1	+	154935032	154935536	True	NM_001826,NM_183001,NM_020524,NM_138300,NM_001130040	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	CKS1B,SHC1,PBXIP1,PYGO2,SHC1	11581,7737,-6465,-774,7737
chrX:70148832-70149577	chrX	+	70148902	70149572	True	NM_001048164,NM_032803,NM_001170931	chrX,chrX,chrX	-,-,+	SLC7A3,SLC7A3,FOXO4	1453,1453,166426
chr3:154824864-154826104	chr3	+	154825218	154825914	True	NM_007289,NR_037902	chr3,chr3	+,-	MME,LOC100507537	-27195,185625
chrX:151876886-151877104	chrX	+	151876921	151877145	True	NM_001129826,NM_005361,NM_175742,NM_005363,NM_001129828,NM_175743,NM_153488,NM_175868,NM_004909,NM_001080848	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,-,+,+,+,-,-	CSAG3,MAGEA2,MAGEA2,MAGEA6,CSAG3,MAGEA2,MAGEA2B,MAGEA6,CSAG2,CSAG2	575,5973,5973,-9727,652,5973,8238,-9727,652,652
chrX:151876886-151877104	chrX	-	151928335	151928559	False	NM_001129826,NM_005361,NM_175742,NM_005362,NM_001129828,NM_175743,NM_153488,NM_004909,NM_001080848	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,-,-,-,+,-,-,+,+	CSAG3,MAGEA2,MAGEA2,MAGEA3,CSAG3,MAGEA2,MAGEA2B,CSAG2,CSAG2	-575,-5971,-5971,9731,-652,-5971,-8236,-652,-652
chr1:92543186-92545162	chr1	+	92543249	92545056	True	NM_001195684,NM_183242	chr1,chr1	-,+	TGFBR3,BTBD8	-171690,805
chr9:36274251-36274810	chr9	+	36274377	36274718	True	NM_001128227,NM_001190388,NM_007096	chr9,chr9,chr9	-,-,+	GNE,GNE,CLTA	2398,2398,-83577
chr1:245320511-245322319	chr1	+	245320825	245322283	True	NM_018012,NM_031844	chr1,chr1	+,-	KIF26B,HNRNPU	-2589,-292998
chr16:75286591-75287091	chr16	+	75286590	75286998	True	NM_001170719,NM_001906,NM_001170717,NM_014567	chr16,chr16,chr16,chr16	-,+,-,-	BCAR1,CTRB1,BCAR1,BCAR1	-4366,-33757,-1064,-1064
chr1:119960724-119961567	chr1	+	119960765	119961616	True	NM_000198,NR_036540,NM_001166120	chr1,chr1,chr1	+,-,+	HSD3B2,LOC644242,HSD3B2	-3073,180351,-3262
chr21:40981488-40981959	chr21	+	40981488	40981940	True	NR_026543,NR_026542,NM_006057	chr21,chr21,chr21	-,-,+	C21orf88,C21orf88,B3GALT5	2859,2859,47313
chr21:43634693-43635097	chr21	+	43634751	43634998	True	NM_004915,NM_207174,NM_003226,NM_016818,NM_207629	chr21,chr21,chr21,chr21,chr21	+,+,-,+,+	ABCG1,ABCG1,TFF3,ABCG1,ABCG1	4268,5009,100759,4268,1188
chr3:113882990-113883640	chr3	+	113883146	113883568	True	NM_000796,NM_024638	chr3,chr3	-,+	DRD3,QTRTD1	14389,-107597
chrX:153774103-153774343	chrX	+	153774175	153774319	True	NM_003639,NM_001099856,NM_001099857,NM_001042351,NM_000402,NM_001145255	chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,-,-,+	IKBKG,IKBKG,IKBKG,G6PD,G6PD,IKBKG	1742,-3767,1242,1518,964,1242
chr11:2159532-2160012	chr11	+	2159853	2159931	True	NR_030158,NR_028044,NR_028043,NM_000612,NM_001127598	chr11,chr11,chr11,chr11,chr11	-,+,+,-,-	MIR483,IGF2AS,IGF2AS,IGF2,IGF2	-4414,1826,1826,323,2460
chr19:3063320-3063967	chr19	+	3063356	3063566	True	NM_002067,NM_198970,NM_198969,NM_001130	chr19,chr19,chr19,chr19	+,-,-,-	GNA11,AES,AES,AES	30841,-985,-392,-985
chrX:153210372-153210971	chrX	+	153210467	153210877	True	NM_003491,NM_002910,NM_003492	chrX,chrX,chrX	-,-,+	NAA10,RENBP,TMEM187	-9999,-235,27113
chr7:75122014-75123234	chr7	+	75123176	75123248	True	NM_001099415,NM_001099435	chr7,chr7	-,+	POM121C,SPDYE5	-7608,1050
chr14:31680105-31680975	chr14	+	31680105	31680591	True	NM_015382,NM_001128126	chr14,chr14	-,+	HECTD1,AP4S1	-3416,-185473
chr17:26902471-26903264	chr17	+	26902478	26903178	True	NM_003593,NM_005165,NM_033198	chr17,chr17,chr17	+,-,-	FOXN1,ALDOC,PIGS	-51570,823,-3591
chr8:25040818-25041489	chr8	+	25041016	25041376	True	NM_024940,NM_006158	chr8,chr8	+,-	DOCK5,NEFL	910,-226885
chr3:42627805-42629082	chr3	+	42628013	42628811	True	NM_016305,NM_004206,NM_032970,NM_001201584	chr3,chr3,chr3,chr3	+,-,-,-	SS18L2,SEC22C,SEC22C,SEC22C	3486,-4493,-4493,-4493
chr8:70042613-70043286	chr8	+	70042829	70043321	True	NM_001128204,NM_001146009	chr8,chr8	+,-	SULF1,SLCO5A1	335537,702133
chrX:54841880-54843223	chrX	+	54842095	54843181	True	NM_177433,NR_002953,NM_201222,NM_014599,NM_198510	chrX,chrX,chrX,chrX,chrX	+,+,+,+,-	MAGED2,SNORA11,MAGED2,MAGED2,ITIH5L	-7975,-1343,-6653,-7349,-17422
chr19:37140526-37141853	chr19	+	37140540	37141858	True	NM_153257,NM_152603	chr19,chr19	-,+	ZNF461,ZNF567	15934,38443
chr3:122379711-122380146	chr3	+	122379733	122380167	True	NM_031458,NM_017554	chr3,chr3	-,+	PARP9,PARP14	-96210,19504
chr11:46141215-46141435	chr11	+	46141308	46141392	True	NM_001101802,NM_052854,NM_016621	chr11,chr11,chr11	-,+,-	PHF21A,CREB3L1,PHF21A	1643,157835,1643
chr14:71263591-71264420	chr14	+	71263598	71264092	True	NM_033141,NM_014982	chr14,chr14	-,+	MAP3K9,PCNX	11846,110029
chr10:43934870-43935588	chr10	+	43935269	43935458	True	NR_026693,NM_001098204	chr10,chr10	+,-	ZNF487P,HNRNPF	-2755,-30573
chr16:85337968-85338199	chr16	+	85338089	85338153	True	NR_033984,NM_198491	chr16,chr16	+,-	LOC400548,FAM92B	-167384,-191975
chr10:101771366-101772211	chr10	+	101771597	101772257	True	NM_015221,NR_024130	chr10,chr10	-,+	DNMBP,DNMBP-AS1	-1921,-84691
chr2:110503507-110505216	chr2	+	110503652	110505072	True	NM_178584,NM_001037866	chr2,chr2	-,+	SEPT10,RGPD6	-131869,45262
chr2:110503507-110505216	chr2	-	111381574	111382994	False	NM_001142807,NM_032260	chr2,chr2	+,-	ACOXL,RGPD5	107155,-45265
chr14:105715551-105715865	chr14	+	105715684	105715885	True	NM_145685,NM_033271	chr14,chr14	-,+	BRF1,BTBD6	-1462,-856
chr1:27189646-27189954	chr1	+	27189734	27189934	True	NM_018066,NM_006142	chr1,chr1	-,+	GPN2,SFN	26985,-152
chr20:30639931-30640190	chr20	+	30640057	30640147	True	NM_030815,NM_002110,NM_001172129,NM_001172131,NM_001172130,NM_001172133,NM_001172132	chr20,chr20,chr20,chr20,chr20,chr20,chr20	-,+,+,+,+,+,+	PDRG1,HCK,HCK,HCK,HCK,HCK,HCK	-100174,-117,-117,-117,-117,-117,-117
chr13:111599003-111599455	chr13	+	111599090	111599442	True	NM_017664,NM_001113511	chr13,chr13	-,+	ANKRD10,ARHGEF7	-31674,168181
chr20:44002801-44003782	chr20	+	44002823	44003712	True	NR_003189,NM_014477	chr20,chr20	+,-	SYS1-DBNDD2,TP53TG5	-11065,3295
chr1:156736586-156737075	chr1	+	156736686	156737068	True	NM_001126050,NM_005973	chr1,chr1	-,+	HDGF,PRCC	-14446,205
chr16:30676778-30676991	chr16	+	30676847	30676945	True	NM_138447,NM_001105079	chr16,chr16	-,+	ZNF689,FBRS	-55165,-1120
chr15:45315269-45315529	chr15	+	45315388	45315516	True	NR_034039,NM_003104,NM_014080	chr15,chr15,chr15	+,+,-	SORD,SORD,DUOX2	-137,-137,90893
chr19:39339182-39339711	chr19	+	39339197	39339711	True	NM_001001716,NM_001533,NM_001005335	chr19,chr19,chr19	+,-,-	NFKBIB,HNRNPL,HNRNPL	50903,956,3318
chr4:113153759-113154192	chr4	+	113153806	113154239	True	NM_018569,NM_052864,NM_001128426	chr4,chr4,chr4	+,-,+	AP1AR,TIFA,AP1AR	-969,52875,-969
chr19:21331091-21332896	chr19	+	21331187	21332866	True	NM_133473,NM_021269	chr19,chr19	+,-	ZNF431,ZNF708	-6408,179396
chr4:89193413-89193742	chr4	+	89193579	89193765	True	NM_001165136,NM_152542	chr4,chr4	+,-	HERC6,PPM1K	106125,12179
chr19:49140828-49141205	chr19	+	49140827	49141243	True	NM_001217,NM_001352,NR_004401	chr19,chr19,chr19	-,-,+	CA11,DBP,SEC1	8259,-188,52
chr9:118249537-118251058	chr9	+	118249536	118251076	True	NM_017418,NM_002160	chr9,chr9	+,-	DEC1,TNC	-345493,-369050
chr17:8093660-8094762	chr17	+	8093888	8094591	True	NM_017622,NR_037447	chr17,chr17	-,+	C17orf59,MIR3676	-324,-3447
chr4:152020380-152020681	chr4	+	152020446	152020708	True	NR_000007,NM_001006,NM_001128924	chr4,chr4,chr4	+,+,-	SNORD73A,RPS3A,SH3D19	4270,45,76046
chr11:66103079-66103450	chr11	+	66103082	66103372	True	NM_001024957,NM_015399,NM_004292,NM_153266	chr11,chr11,chr11,chr11	-,-,-,+	BRMS1,BRMS1,RIN1,TMEM151A	9260,9260,678,-43760
chr4:70727712-70728975	chr4	+	70727805	70728984	True	NM_005420,NM_001025104	chr4,chr4	-,+	SULT1E1,CSN1S1	-1935,67814
chr10:94832031-94832247	chr10	+	94832041	94832223	True	NM_013451,NM_057157,NM_000783	chr10,chr10,chr10	-,+,+	MYOF,CYP26A1,CYP26A1	409901,1008,1423
chr1:76540538-76541265	chr1	+	76540560	76541246	True	NM_001160011,NM_152996,NR_026546	chr1,chr1,chr1	+,+,-	ST6GALNAC3,ST6GALNAC3,ASB17	-222,-222,-142444
chr10:103533300-103533916	chr10	+	103533356	103533930	True	NM_006993,NM_033164,NM_033165,NM_033163,NR_036114,NM_006119	chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,+,-	NPM3,FGF8,FGF8,FGF8,MIR3158-1,FGF8	9290,1879,1879,1879,-172234,1879
chr12:113659603-113659920	chr12	+	113659852	113659956	True	NM_138451,NM_017901,NM_001143819	chr12,chr12,chr12	-,+,+	IQCD,TPCN1,TPCN1	-972,-643,-643
chr3:46499567-46500155	chr3	+	46499568	46499954	True	NM_002343,NM_001199149,NM_031440	chr3,chr3,chr3	-,-,+	LTF,LTF,RTP3	6694,5257,39530
chr4:8454723-8454935	chr4	+	8454746	8454934	True	NM_152544,NM_003501	chr4,chr4	+,-	METTL19,ACOX3	-12265,-12294
chr10:3828662-3828930	chr10	+	3828717	3828931	True	NM_001160125,NM_001160124,NM_002627,NR_027653,NM_001300	chr10,chr10,chr10,chr10,chr10	-,-,+,-,-	KLF6,KLF6,PFKP,KLF6,KLF6	-1244,-1244,-719016,-1244,-1244
chr15:41410559-41412504	chr15	+	41410654	41412309	True	NM_017553,NM_007236	chr15,chr15	-,+	INO80,CHP	-2314,111127
chr2:128441569-128441948	chr2	+	128441573	128441975	True	NM_001161404,NM_001136037,NM_001161403,NM_032740	chr2,chr2,chr2,chr2	-,-,-,+	LIMS2,LIMS2,LIMS2,SFT2D3	-2213,-8809,-8809,16621
chr10:43573409-43574220	chr10	+	43573534	43574268	True	NM_020975,NM_020630,NM_145313	chr10,chr10,chr10	+,+,-	RET,RET,RASGEF1A	-1068,-1068,188149
chr17:38186839-38188190	chr17	+	38187189	38188201	True	NR_003692,NM_001079518	chr17,chr17	+,-	SNORD124,MED24	-3453,22738
chr15:90119407-90120215	chr15	+	90119428	90120030	True	NM_152259,NR_027077	chr15,chr15	+,-	C15orf42,LOC283761	-662,-52163
chr3:128719390-128719607	chr3	+	128719434	128719622	True	NM_020741,NM_024768	chr3,chr3	-,+	KIAA1257,CCDC48	-6448,849
chr5:114725759-114726218	chr5	+	114725873	114726263	True	NM_001284,NM_001040440	chr5,chr5	+,-	AP3S1,CCDC112	451355,-93415
chr20:30410818-30411296	chr20	+	30410829	30411113	True	NM_004118,NM_033118	chr20,chr20	-,+	FOXS1,MYLK2	22357,-3702
chr2:202125968-202126377	chr2	+	202126258	202126376	True	NM_001080125,NM_001127391,NM_033356	chr2,chr2,chr2	+,-,+	CASP8,ALS2CR12,CASP8	-3563,95775,-1094
chr17:74636300-74636516	chr17	+	74636371	74636473	True	NM_018414,NR_004395	chr17,chr17	-,+	ST6GALNAC1,SNORD1A	3471,-78707
chr5:127413903-127414104	chr5	+	127413903	127414104	True	NR_015360,NM_001046	chr5,chr5	-,+	FLJ33630,SLC12A2	4712,5378
chr16:4675957-4677104	chr16	+	4676087	4677045	True	NM_001142289,NM_001142291,NM_001142290,NM_015246,NM_145253	chr16,chr16,chr16,chr16,chr16	+,+,+,+,-	MGRN1,MGRN1,MGRN1,MGRN1,FAM100A	-1312,-1312,-1312,-1312,-11160
chr19:19740858-19741062	chr19	+	19740990	19741060	True	NM_004720,NM_033204	chr19,chr19	-,+	LPAR2,ZNF101	-1951,38602
chr16:3116141-3116343	chr16	+	3116249	3116389	True	NM_032805,NM_004221,NM_001012718,NM_001012636,NM_001012635,NM_001012634,NM_001012633,NM_001012632,NM_001012631	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	-,+,+,+,+,+,+,+,+	ZSCAN10,IL32,IL32,IL32,IL32,IL32,IL32,IL32,IL32	26522,-987,-987,-515,-688,-661,-987,-637,-987
chr17:56456491-56458072	chr17	+	56456514	56458088	True	NR_027647,NM_003168	chr17,chr17	+,-	LPO,SUPT4H1	-140785,-26951
chr20:24971768-24972736	chr20	+	24971880	24972669	True	NM_003650,NM_020531	chr20,chr20	+,-	CST7,C20orf3	-42073,807
chr7:22890962-22892406	chr7	+	22891071	22892075	True	NM_019059,NR_003075	chr7,chr7	-,+	TOMM7,SNORD93	-28650,4156
chr17:27922036-27922596	chr17	+	27922051	27922449	True	NM_014030,NM_001085454,NM_152345	chr17,chr17,chr17	-,-,+	GIT1,GIT1,ANKRD13B	-5441,-5441,-1575
chr3:122291583-122291878	chr3	+	122291715	122291893	True	NM_031458,NM_138287,NM_001146106,NM_001146105,NM_001146104,NM_001146103,NM_001146102,NM_001113523	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-,-,+	PARP9,DTX3L,PARP9,PARP9,PARP9,PARP9,PARP9,PARP15	-8192,-8589,-8521,-8568,-8521,-8192,-8568,4555
chr4:76815920-76816436	chr4	+	76815968	76816081	True	NM_001130017,NM_006239	chr4,chr4	+,-	ART3,PPEF2	116255,7655
chr16:58223153-58223429	chr16	+	58223155	58223457	True	NM_001142302,NM_001896	chr16,chr16	+,-	CCDC113,CSNK2A2	60382,8375
chr5:140088394-140089379	chr5	+	140088535	140089219	True	NR_026704,NM_144723,NR_026703,NM_002109	chr5,chr5,chr5,chr5	+,+,+,-	VTRNA1-2,ZMAT2,VTRNA1-1,HARS	9291,-8561,1641,-17564
chr17:25681461-25682290	chr17	+	25681566	25681916	True	NM_000625,NM_134265	chr17,chr17	-,+	NOS2,WSB1	445689,-60513
chr7:102712431-102713443	chr7	+	102712848	102713482	True	NM_031905,NM_001161012,NM_001161013,NM_001161010,NM_001161011,NM_001161009,NM_001111038,NM_145032	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,+,+,-,-	ARMC10,ARMC10,ARMC10,ARMC10,ARMC10,ARMC10,FBXL13,FBXL13	1845,1845,1845,1845,1845,1845,1858,1585
chr1:17869414-17869676	chr1	+	17869462	17869664	True	NM_018125,NM_018715	chr1,chr1	+,-	ARHGEF10L,RCC2	-3183,-103242
chr12:58242006-58243322	chr12	+	58242011	58243012	True	NM_005730,NM_001172697	chr12,chr12	-,+	CTDSP2,TSFM	-1264,-65534
chr10:90574940-90576383	chr10	+	90574940	90576406	True	NM_144590,NM_001128215	chr10,chr10	-,+	ANKRD22,LIPM	35388,-12505
chr9:125310265-125310976	chr9	+	125310412	125310815	True	NM_001004454,NM_001004457	chr9,chr9	-,+	OR1L8,OR1N2	20004,4633
chr20:45277398-45278925	chr20	+	45277819	45278871	True	NM_022829,NM_030777,NM_001193342,NM_001193339	chr20,chr20,chr20,chr20	-,+,-,-	SLC13A3,SLC2A10,SLC13A3,SLC13A3	1279,59407,1279,1279
chr22:39795016-39795354	chr22	+	39795158	39795246	True	NM_006116,NM_153497,NM_001033853	chr22,chr22,chr22	+,+,-	TAB1,TAB1,RPL3	512,512,-79488
chr1:11984240-11985544	chr1	+	11984632	11985177	True	NM_000302,NM_138346	chr1,chr1	+,-	PLOD1,KIAA2013	9546,1358
chr11:62032647-62034457	chr11	+	62032657	62034327	True	NM_002411,NM_206998	chr11,chr11	+,-	SCGB2A2,SCGB1D4	3302,32259
chr15:66085888-66086239	chr15	+	66085963	66086032	True	NM_004663,NM_005848,NM_001144823	chr15,chr15,chr15	+,-,-	RAB11A,DENND4A,DENND4A	75763,-1332,-1332
chr12:12420502-12421410	chr12	+	12420501	12421374	True	NM_058169,NM_002336	chr12,chr12	+,-	LOH12CR1,LRP6	88645,-690
chr4:72226956-72228626	chr4	+	72227003	72228515	True	NM_000583,NM_003759	chr4,chr4	-,+	GC,SLC4A4	421615,-22287
chr1:26152893-26153429	chr1	+	26152898	26153439	True	NM_019557,NR_024498,NM_001099625,NM_001099627,NM_001099626	chr1,chr1,chr1,chr1,chr1	+,-,+,+,+	FAM54B,LOC646471,FAM54B,FAM54B,FAM54B	-6265,-2801,-6552,-6552,-5630
chr5:121646551-121647507	chr5	+	121646600	121647492	True	NM_005460,NM_002317	chr5,chr5	+,-	SNCAIP,LOX	327,-232545
chr7:84707712-84708403	chr7	+	84707813	84708404	True	NM_000840,NM_152754	chr7,chr7	+,-	GRM3,SEMA3D	1564825,42902
chr1:227921722-227922079	chr1	+	227921721	227921964	True	NR_024485,NM_053052,NR_024486,NM_001161465,NM_023007	chr1,chr1,chr1,chr1,chr1	+,+,+,-,-	LOC100130093,SNAP47,LOC100130093,JMJD4,JMJD4	-5532,732,-5532,1205,1205
chr18:77627796-77628348	chr18	+	77627906	77628154	True	NM_012283,NM_001146343	chr18,chr18	+,-	KCNG2,PQLC1	-4289,83549
chr12:120717914-120718305	chr12	+	120718123	120718313	True	NM_002859,NM_012240	chr12,chr12	-,+	PXN,SIRT4	-14560,21810
chr13:33003743-33004949	chr13	+	33004183	33004864	True	NM_000059,NM_052818,NM_001079691	chr13,chr13,chr13	+,-,-	BRCA2,N4BP2L1,N4BP2L1	-114625,-1868,-1868
chr7:27135299-27135561	chr7	+	27135379	27135583	True	NM_005522,NM_153620,NM_006735,NR_002795	chr7,chr7,chr7,chr7	-,-,-,+	HOXA1,HOXA1,HOXA2,HOXA11-AS1	92,92,6861,89443
chrX:101501636-101502383	chrX	+	101501805	101502261	True	NM_001012978,NM_022053	chrX,chrX	-,+	BEX5,NXF2	-90819,61
chrX:101501636-101502383	chrX	-	101694761	101695217	False	NR_002216,NM_022053	chrX,chrX	+,-	NXF4,NXF2	109675,-61
chr16:31122151-31122474	chr16	+	31122170	31122444	True	NM_001122957,NM_032188,NM_182958,NM_206824,NM_005881	chr16,chr16,chr16,chr16,chr16	+,+,+,-,+	BCKDK,MYST1,MYST1,VKORC1,BCKDK	-2559,6540,6540,-15894,-2559
chr2:183903475-183903759	chr2	+	183903506	183903770	True	NM_013436,NM_001142314,NM_205842	chr2,chr2,chr2	-,+,-	NCKAP1,DUSP19,NCKAP1	-277,39516,-277
chr7:2441691-2441894	chr7	+	2441699	2441888	True	NM_018641,NM_013321	chr7,chr7	+,-	CHST12,SNX8	1370,-87600
chr15:68352805-68353111	chr15	+	68353043	68353112	True	NM_016166,NM_001031733	chr15,chr15	+,-	PIAS1,CALML4	-6528,145389
chr10:95368845-95369745	chr10	+	95368942	95369541	True	NM_006744,NM_006204	chr10,chr10	-,+	RBP4,PDE6C	-7949,2803
chr2:74668035-74668370	chr2	+	74668034	74668314	True	NM_033046,NM_001015056,NM_031288,NM_001015055	chr2,chr2,chr2,chr2	-,-,+,-	RTKN,RTKN,INO80B,RTKN	-324,-324,13835,796
chr8:102762613-102762990	chr8	+	102762626	102762966	True	NM_024915,NM_032041	chr8,chr8	+,-	GRHL2,NCALD	-258013,40523
chr7:32533740-32534884	chr7	+	32533764	32534719	True	NM_012322,NM_015060,NR_024466,NM_001139499,NM_001130710	chr7,chr7,chr7,chr7,chr7	-,+,-,-,-	LSM5,AVL9,LSM5,LSM5,LSM5	-3741,456,-3289,201,201
chr20:25386013-25387024	chr20	+	25386301	25386650	True	NM_021067,NM_001042472	chr20,chr20	+,-	GINS1,ABHD12	1672,-14683
chr2:219028679-219029079	chr2	+	219028796	219029028	True	NM_000634,NM_001557	chr2,chr2	-,+	CXCR1,CXCR2	2738,-38111
chr1:110037551-110038041	chr1	+	110037611	110038025	True	NM_020703,NM_001134403,NM_001134402,NM_182580,NM_001134404,NM_001134400	chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,+,+,+	AMIGO1,CYB561D1,CYB561D1,CYB561D1,CYB561D1,CYB561D1	14361,-961,-1004,-961,-961,-961
chr17:78452969-78453312	chr17	+	78453008	78453360	True	NM_002522,NM_173627	chr17,chr17	-,+	NPTX1,FLJ35220	-2604,-64092
chr3:52530040-52531469	chr3	+	52530166	52531395	True	NM_015136,NM_001134231	chr3,chr3	+,-	STAB1,NT5DC2	-861,36453
chr2:100720470-100720701	chr2	+	100720527	100720595	True	NM_001011717,NM_001025108	chr2,chr2	+,-	NMS,AFF3	366348,1500
chr16:30710863-30711077	chr16	+	30710874	30711108	True	NM_001014979,NM_006662	chr16,chr16	-,+	C16orf93,SRCAP	62507,-463
chr21:17101344-17101885	chr21	+	17101409	17101933	True	NM_003489,NM_013396	chr21,chr21	-,+	NRIP1,USP25	-664283,562
chr3:32150638-32151227	chr3	+	32150638	32151242	True	NM_017784,NM_015141	chr3,chr3	-,+	OSBPL10,GPD1L	-127296,-2686
chr1:201369670-201370092	chr1	+	201369780	201369983	True	NM_005558,NM_001005337	chr1,chr1	-,+	LAD1,PKP1	-1111,-117251
chr7:54726000-54726812	chr7	+	54726144	54726826	True	NM_001012456,NM_182546	chr7,chr7	-,+	SEC61G,VSTM2A	100163,-116176
chr2:14772882-14773360	chr2	+	14773038	14773402	True	NM_015909,NM_145175	chr2,chr2	-,+	NBAS,FAM84A	928102,-279
chr3:1145549-1147224	chr3	+	1145800	1147254	True	NM_000564,NM_014461	chr3,chr3	-,+	IL5RA,CNTN6	2004854,-11231
chr15:27108487-27109919	chr15	+	27108802	27109873	True	NM_001165037,NM_000810,NM_021912	chr15,chr15,chr15	+,+,-	GABRA5,GABRA5,GABRB3	2399,1992,-89867
chr1:954565-954771	chr1	+	954668	954734	True	NM_005101,NM_001142467,NM_198576	chr1,chr1,chr1	+,-,+	ISG15,HES4,AGRN	-5872,-19116,768
chr16:12070242-12070466	chr16	+	12070241	12070513	True	NM_001130007,NM_032167	chr16,chr16	-,+	GSPT1,RUNDC2A	-59722,88
chr16:14786648-14787546	chr16	+	14786833	14787411	True	NM_003561,NM_016561	chr16,chr16	-,+	PLA2G10,BFAR	1165,-60216
chr16:14786648-14787546	chr16	+	14825950	14826534	False	NM_003561,NM_016561	chr16,chr16	-,+	PLA2G10,BFAR	-37424,-99333
chr5:140235433-140235821	chr5	+	140235432	140235621	True	NM_014005,NM_031860,NM_002109,NM_031859,NM_018901,NM_031857	chr5,chr5,chr5,chr5,chr5,chr5	+,+,-,+,+,+	PCDHA9,PCDHA10,HARS,PCDHA10,PCDHA10,PCDHA9	-8126,12,-164461,12,12,-8126
chr7:63501705-63502739	chr7	+	63501759	63502757	True	NM_178558,NM_001159522	chr7,chr7	-,+	ZNF680,ZNF727	520798,3063
chr6:100055956-100056684	chr6	+	100056026	100056713	True	NM_005190,NM_021620	chr6,chr6	-,+	CCNC,PRDM13	-39336,-1427
chr20:34282665-34283683	chr20	+	34282998	34283672	True	NM_080748,NM_001198989,NM_021100,NR_037570	chr20,chr20,chr20,chr20	+,-,-,-	ROMO1,NFS1,NFS1,NFS1	3559,3675,3675,3675
chr22:20399318-20399661	chr22	+	20399375	20399535	True	NR_003563,NR_026919	chr22,chr22	-,+	PI4KAP1,LOC150197	-680,-205573
chr22:20399318-20399661	chr22	+	21843351	21843435	False	NM_015094,NR_003700	chr22,chr22	+,-	HIC2,PI4KAP2	-71711,28395
chr22:20399318-20399661	chr22	+	21089523	21089683	False	NM_002650,NR_026815	chr22,chr22	-,+	PI4KA,TMEM191A	-568,-34174
chr7:91776471-91778102	chr7	+	91776664	91777999	True	NM_001146152,NM_019004	chr7,chr7	-,+	CYP51A1,ANKIB1	-12605,97548
chr9:19047152-19048309	chr9	+	19047381	19048190	True	NM_153707,NM_006570	chr9,chr9	-,+	FAM154A,RRAGA	-14125,1181
chr5:36875748-36876006	chr5	+	36875747	36875983	True	NM_133433,NM_015384,NM_023073	chr5,chr5,chr5	+,+,-	NIPBL,NIPBL,C5orf42	877,877,373597
chr1:29061918-29062687	chr1	+	29062064	29062707	True	NM_001173128,NM_001172828,NM_005644,NM_016258	chr1,chr1,chr1,chr1	+,+,-,+	YTHDF2,YTHDF2,TAF12,YTHDF2	425,744,-92460,428
chr9:91151761-91152601	chr9	+	91151761	91152630	True	NM_001161625,NM_145283,NM_001100111	chr9,chr9,chr9	+,+,-	NXNL2,NXNL2,LOC286238	-1797,-1797,114495
chr17:28661264-28661774	chr17	+	28661263	28661529	True	NM_206832,NM_001304	chr17,chr17	-,+	TMIGD1,CPD	-198,44412
chr1:247268104-247268544	chr1	+	247268322	247268568	True	NM_024804,NM_001142572,NM_207401,NM_173858	chr1,chr1,chr1,chr1	-,-,-,+	ZNF669,ZNF669,C1orf229,VN1R5	-648,-648,7201,150805
chr19:58457903-58458300	chr19	+	58457907	58458327	True	NR_036508,NM_005773	chr19,chr19	+,-	LOC100128398,ZNF256	55934,800
chr21:30564651-30565407	chr21	+	30564770	30565371	True	NM_006585,NR_027072	chr21,chr21	-,+	CCT8,NCRNA00189	-118760,429
chr4:147807991-147808675	chr4	+	147808245	147808711	True	NM_004575,NM_031956	chr4,chr4	+,-	POU4F2,TTC29	-248264,58373
chr10:89575147-89576309	chr10	+	89575146	89576116	True	NM_032810,NR_028492	chr10,chr10	-,+	ATAD1,CFLP1	1859,1953
chr1:160459986-160460592	chr1	+	160460035	160460541	True	NM_020335,NM_001184714	chr1,chr1	+,-	VANGL2,SLAMF6	-89722,32561
chr11:3254019-3254249	chr11	+	3254023	3254281	True	NR_027138,NM_001039165	chr11,chr11	+,-	C11orf36,MRGPRE	-14512,-407
chr16:84683717-84683920	chr16	+	84683821	84683951	True	NM_021149,NM_024731	chr16,chr16	-,+	COTL1,KLHL36	-32152,-1741
chr19:51502493-51504327	chr19	+	51502967	51504269	True	NM_012315,NM_144505,NM_144507,NM_144506,NM_014441,NM_007196	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,+,-	KLK9,KLK8,KLK8,KLK8,SIGLEC9,KLK8	8671,739,739,739,123867,739
chr16:57654467-57654699	chr16	+	57654514	57654720	True	NM_001145771,NM_001145770,NM_001145773,NM_001145772,NM_033212,NM_201525,NM_201524,NM_005682	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,-,+,+,+	GPR56,GPR56,GPR56,GPR56,CCDC102A,GPR56,GPR56,GPR56	7698,-655,7698,7698,-84037,7698,7698,-655
chr3:166688407-166689513	chr3	+	166688569	166689272	True	NM_001122752,NM_001199202	chr3,chr3	+,-	SERPINI1,ZBBX	764159,408856
chr3:42726638-42726891	chr3	+	42726647	42726835	True	NM_152393,NR_027753	chr3,chr3	+,-	KBTBD5,HHATL	175,16228
chr13:114323049-114323921	chr13	+	114323120	114323908	True	NM_000705,NM_002929	chr13,chr13	-,+	ATP4B,GRK1	-10607,-1574
chr10:71332613-71332972	chr10	+	71332754	71333006	True	NM_145306,NM_020999	chr10,chr10	+,-	C10orf35,NEUROG3	56996,254
chr19:42831581-42832016	chr19	+	42831605	42831979	True	NM_001145940,NM_001410	chr19,chr19	-,+	PAFAH1B3,MEGF8	-24653,-1896
chr19:35942047-35942862	chr19	+	35942163	35942899	True	NM_005306,NM_207392	chr19,chr19	+,-	FFAR2,KRTDAP	-1597,38507
chr1:94683328-94684571	chr1	+	94683530	94684587	True	NM_004815,NM_001122674	chr1,chr1	-,+	ARHGAP29,ABCD3	18770,199345
chr7:100794849-100795145	chr7	+	100794975	100795081	True	NM_003378,NM_001283	chr7,chr7	-,+	VGF,AP1S1	13831,2604
chr16:67284169-67285456	chr16	+	67284275	67285212	True	NM_013241,NM_004594	chr16,chr16	-,+	FHOD1,SLC9A5	-2850,-1471
chr3:46721154-46722689	chr3	+	46721155	46722329	True	NM_182775,NM_147196	chr3,chr3	-,+	ALS2CL,TMIE	-2256,20493
chr11:64527387-64528636	chr11	+	64527663	64528593	True	NM_006244,NM_001164716,NM_005609	chr11,chr11,chr11	+,-,-	PPP2R5B,PYGM,PYGM	163549,34,34
chr14:100773631-100773932	chr14	+	100773658	100773948	True	NM_001039355,NR_029906	chr14,chr14	-,+	SLC25A29,MIR345	-798,247
chr3:9990943-9991612	chr3	+	9991124	9991502	True	NM_207351,NM_001077415	chr3,chr3	-,+	PRRT3,CRELD1	2626,-15650
chr7:38252798-38253537	chr7	+	38252878	38253538	True	NM_001003799,NM_032016	chr7,chr7	-,+	TARP,STARD3NL	59760,-35003
chr17:41466647-41466951	chr17	+	41466768	41466992	True	NR_027412,NR_027413,NM_001661	chr17,chr17,chr17	-,-,+	LOC100130581,LOC100130581,ARL4D	-502,-502,9360
chr3:13112562-13113885	chr3	+	13112670	13113900	True	NM_012298,NM_001134382	chr3,chr3	+,-	CAND2,IQSEC1	-274550,767
chr10:71814759-71814983	chr10	+	71814762	71814988	True	NM_018649,NM_001198696	chr10,chr10	+,-	H2AFY2,AIFM2	-2456,77756
chr14:32412825-32414343	chr14	+	32412992	32414392	True	NR_027263,NM_001030055	chr14,chr14	-,+	C14orf128,ARHGAP5	131563,132102
chrX:86773511-86774055	chrX	+	86773625	86774108	True	NM_019117,NM_001145414,NM_057162	chrX,chrX,chrX	+,-,+	KLHL4,CHM,KLHL4	-974,-1471059,-974
chr5:161495515-161496106	chr5	+	161495563	161496122	True	NM_198904,NM_000816,NM_021911,NM_198903	chr5,chr5,chr5,chr5	+,+,-,+	GABRG2,GABRG2,GABRB2,GABRG2	-966,-966,-520433,-966
chr6:391223-391497	chr6	+	391269	391465	True	NM_148959,NM_002460,NM_001195286,NR_036585	chr6,chr6,chr6,chr6	-,+,+,+	HUS1B,IRF4,IRF4,IRF4	265549,273,273,273
chr22:42345828-42346503	chr22	+	42345843	42346340	True	NM_024053,NM_001002876,NR_024355,NM_001110215	chr22,chr22,chr22,chr22	-,-,+,-	CENPM,CENPM,LOC339674,CENPM	-2695,-2695,1850,-9620
chr5:134177199-134178102	chr5	+	134177298	134177708	True	NM_152409,NM_002653,NM_001135586	chr5,chr5,chr5	+,-,+	C5orf24,PITX1,C5orf24	3661,192314,3949
chr21:26934770-26935232	chr21	+	26934827	26935249	True	NR_024092,NR_001458	chr21,chr21	-,+	C21orf71,MIR155HG	20337,-424
chr16:88754511-88754801	chr16	+	88754516	88754836	True	NM_001012759,NM_178310	chr16,chr16	+,-	CTU2,SNAI3	18054,-1634
chr19:998932-999789	chr19	+	999233	999707	True	NM_138690,NM_001033026	chr19,chr19	+,-	GRIN3B,C19orf6	729,21484
chr7:66387595-66389482	chr7	+	66387609	66389358	True	NM_017994,NM_016038	chr7,chr7	+,-	C7orf42,SBDS	-1457,71280
chr9:116353905-116354703	chr9	+	116353958	116354613	True	NM_017443,NM_144489	chr9,chr9	-,+	POLE3,RGS3	-180929,1586
chr8:110656473-110656902	chr8	+	110656507	110656682	True	NM_001099750,NM_004215,NM_001099751,NM_001099747,NM_001099753,NM_001099752,NM_001099755,NM_001099754,NM_001099756,NM_017786,NM_001099748,NM_001099749	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,+,-,-,-,-,-,-,-,-,-,-	SYBU,EBAG9,SYBU,SYBU,SYBU,SYBU,SYBU,SYBU,SYBU,SYBU,SYBU,SYBU	4501,-104248,1191,4501,420,1191,420,420,-1088,4501,4501,4501
chr17:81008584-81008838	chr17	+	81008666	81008820	True	NM_001004431	chr17	+	METRNL	28746
chr2:26466483-26467079	chr2	+	26466613	26467095	True	NM_000182,NM_000183	chr2,chr2	-,+	HADHA,HADHB	549,520
chr6:53660954-53662477	chr6	+	53661027	53662432	True	NM_018214,NM_001003760	chr6,chr6	+,-	LRRC1,KLHL31	-1300,-130521
chr17:33414094-33415037	chr17	+	33414381	33415066	True	NM_017559,NR_037713	chr17,chr17	+,-	FNDC8,RFFL	33564,1333
chr21:10993159-10994452	chr21	+	10993661	10993860	True	NM_199260,NM_199261,NM_199259,NR_037458	chr21,chr21,chr21,chr21	-,-,-,+	TPTE,TPTE,TPTE,MIR3687	-2741,-2741,-2741,-1167509
chr19:8271506-8272247	chr19	+	8271535	8271609	True	NM_024552,NM_032447	chr19,chr19	+,-	LASS4,FBN3	2607,-59150
chr21:29910736-29911753	chr21	+	29910748	29911794	True	NM_013240,NR_026552,NR_026553	chr21,chr21,chr21	-,+,+	N6AMT1,NCRNA00161,NCRNA00161	345949,5,5
chr17:7017567-7018064	chr17	+	7017635	7018109	True	NM_080913,NM_080912,NM_001181,NM_080914,NM_001201352,NM_201566	chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,+	ASGR2,ASGR2,ASGR2,ASGR2,ASGR2,SLC16A13	71,71,71,-6,71,-78292
chr1:18837241-18838312	chr1	+	18837340	18838361	True	NM_152375,NM_152232	chr1,chr1	+,-	KLHDC7A,TAS1R2	-29967,347844
chr6:55662573-55662829	chr6	+	55662696	55662862	True	NM_021073,NM_207410	chr6,chr6	-,+	BMP5,GFRAL	77563,-470488
chr19:34116150-34116429	chr19	+	34116288	34116415	True	NM_001166057,NM_001127895,NM_001127896	chr19,chr19,chr19	-,+,+	PEPD,CHST8,CHST8	-103489,-3478,-3466
chr15:83619725-83620992	chr15	+	83619803	83620937	True	NM_031452,NM_004839,NM_199330,NM_199331,NM_199332	chr15,chr15,chr15,chr15,chr15	+,-,-,-,-	FAM103A1,HOMER2,HOMER2,HOMER2,HOMER2	34057,586,586,586,586
chr5:140739258-140739637	chr5	+	140739302	140739612	True	NM_032095,NM_018923,NM_032096,NM_018922,NM_032054,NM_018918,NM_032053,NM_005642,NM_018917	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,+,-,+	PCDHGB1,PCDHGB2,PCDHGB2,PCDHGB1,PCDHGA5,PCDHGA5,PCDHGA4,TAF7,PCDHGA4	-9539,90,90,-9539,4285,4285,-4599,-38951,-4599
chr18:45448971-45450339	chr18	+	45448977	45450230	True	NM_005901,NM_001142397,NM_001135937,NM_001003652	chr18,chr18,chr18,chr18	-,+,-,-	SMAD2,CTIF,SMAD2,SMAD2	6746,615196,7335,7332
chr6:31873331-31874633	chr6_qbl_hap6	+	3167237	3168197	False	NM_025256,NM_001178063,NM_181842,NM_006709	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	-,+,-,-	EHMT2,C2,ZBTB12,EHMT2	-7982,-4720,-3674,-7982
chr6:31873331-31874633	chr6_mcf_hap5	+	3253326	3254286	False	NM_025256,NM_001178063,NM_181842,NM_006709	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	-,+,-,-	EHMT2,C2,ZBTB12,EHMT2	-7982,-4718,-3674,-7982
chr6:31873331-31874633	chr6_cox_hap2	+	3383203	3384163	False	NM_025256,NM_001178063,NM_181842,NM_006709	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	-,+,-,-	EHMT2,C2,ZBTB12,EHMT2	-7985,-4724,-3680,-7985
chr6:31873331-31874633	chr6	+	31873448	31874408	True	NM_025256,NM_001178063,NM_181842,NM_006709	chr6,chr6,chr6,chr6	-,+,-,-	EHMT2,C2,ZBTB12,EHMT2	-7984,-4723,-3679,-7984
chr6:31873331-31874633	chr6_dbb_hap3	+	3159030	3159990	False	NM_025256,NM_001178063,NM_181842,NM_006709	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	-,+,-,-	EHMT2,C2,ZBTB12,EHMT2	-7984,-4723,-3679,-7984
chr12:56223859-56224309	chr12	+	56224015	56224338	True	NR_036478,NR_036479,NR_036476,NR_036477,NM_032364	chr12,chr12,chr12,chr12,chr12	+,+,+,+,-	LOC440104,LOC440104,LOC440104,LOC440104,DNAJC14	-674,-674,-674,-674,-595
chr10:934879-935696	chr10	+	935076	935644	True	NM_015155,NM_012341	chr10,chr10	-,+	LARP4B,GTPBP4	-3374,98704
chr8:37889332-37889653	chr8	+	37889348	37889642	True	NM_000025,NM_004095	chr8,chr8	-,+	ADRB3,EIF4EBP1	-65164,-1379
chr1:151812522-151812722	chr1	+	151812536	151812770	True	NR_024237,NM_005060,NM_001136003	chr1,chr1,chr1	+,-,-	LOC100132111,RORC,C2CD4D	-1642,-8188,313
chr19:52838311-52838569	chr19	+	52838538	52838608	True	NM_001161427,NM_001161426,NM_001161425,NM_001102657	chr19,chr19,chr19,chr19	+,+,+,-	ZNF610,ZNF610,ZNF610,ZNF836	889,889,889,-163642
chr11:129940865-129942164	chr11	+	129940950	129942182	True	NR_024516,NR_024515,NM_001642,NM_001142278,NM_199437,NM_001142277,NM_001142276	chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,-,+,+	APLP2,APLP2,APLP2,APLP2,PRDM10,APLP2,APLP2	-1285,-1285,-1285,-1285,-68220,-1285,-1285
chr9:114543276-114543857	chr9	+	114543481	114543709	True	NM_003358,NM_173521	chr9,chr9	+,-	UGCG,C9orf84	115496,2130
chrX:128674752-128675920	chrX	+	128674774	128675936	True	NM_000276,NM_139035,NM_001587	chrX,chrX,chrX	+,-,+	OCRL,SMARCA1,OCRL	-573,-17314,-573
chr11:20689352-20690139	chr11	+	20689415	20690054	True	NM_201551,NM_006157,NM_001029865	chr11,chr11,chr11	+,+,-	NELL1,NELL1,DBX1	1062,1062,-507545
chr1:109254807-109255374	chr1	+	109254998	109255332	True	NM_144584,NM_001144937	chr1,chr1	-,+	HENMT1,FNDC7	-50850,223
chr9:35957461-35958304	chr9	+	35957469	35958331	True	NR_024283,NM_019897	chr9,chr9	+,-	LOC158376,OR2S2	-48040,12
chr11:60689638-60690588	chr11	+	60689722	60690587	True	NM_014502,NM_017870,NM_024092,NM_178031	chr11,chr11,chr11,chr11	-,+,+,+	PRPF19,TMEM132A,TMEM109,TMEM132A	-15661,1325,-8402,1325
chr11:112037132-112037517	chr11	+	112037271	112037522	True	NM_001562,NM_031938,NM_001037290,NM_031275	chr11,chr11,chr11,chr11	-,+,+,+	IL18,BCO2,BCO2,TEX12	-2431,8685,9566,572
chr13:50656955-50657507	chr13	+	50656970	50657373	True	NR_029485,NR_002605	chr13,chr13	-,+	MIR15A,DLEU1	-33633,-615
chr19:45578956-45579320	chr19	+	45578993	45579309	True	NM_145288,NM_001007269,NM_001007270,NM_024707	chr19,chr19,chr19,chr19	-,+,+,+	ZNF296,GEMIN7,GEMIN7,GEMIN7	429,3220,3208,3220
chr6:30229184-30230509	chr6_qbl_hap6	+	1522180	1522876	False	NR_027822,NM_003449	chr6_qbl_hap6,chr6_qbl_hap6	+,-	HLA-L,TRIM26	-1976,-48106
chr6:30229184-30230509	chr6_dbb_hap3	+	1522943	1523639	False	NR_027822,NM_003449	chr6_dbb_hap3,chr6_dbb_hap3	+,-	HLA-L,TRIM26	-1978,-48106
chr6:30229184-30230509	chr6	+	30229266	30229962	True	NR_027822,NM_003449	chr6,chr6	+,-	HLA-L,TRIM26	-1978,-48113
chr6:30229184-30230509	chr6_ssto_hap7	+	1559267	1559963	False	NR_027822,NM_003449	chr6_ssto_hap7,chr6_ssto_hap7	+,-	HLA-L,TRIM26	-1978,-47702
chr6:30229184-30230509	chr6_cox_hap2	+	1741520	1742058	False	NR_027822,NM_003449	chr6_cox_hap2,chr6_cox_hap2	+,-	HLA-L,TRIM26	-2136,-48267
chr2:238705276-238706590	chr2	+	238705369	238706212	True	NM_001080504,NR_033308	chr2,chr2	+,-	RBM44,RAB17	1175,-205600
chr20:3189309-3189933	chr20	+	3189323	3189967	True	NM_033453,NM_181493,NM_023935	chr20,chr20,chr20	+,+,-	ITPA,ITPA,DDRGK1	88,88,-4028
chr11:47269197-47270247	chr11	+	47269355	47270247	True	NM_001130102,NM_001610,NM_001130101,NM_005693,NM_001131064	chr11,chr11,chr11,chr11,chr11	+,-,+,+,-	NR1H3,ACP2,NR1H3,NR1H3,ACP2	201,260,9249,9249,260
chr10:29919120-29919577	chr10	+	29919151	29919605	True	NM_021738,NR_003930	chr10,chr10	-,+	SVIL,LOC387647	4346,-220701
chr10:75407525-75407945	chr10	+	75407618	75407988	True	NM_021245,NM_024875,NM_001114133,NM_004922	chr10,chr10,chr10,chr10	-,-,-,+	MYOZ1,SYNPO2L,SYNPO2L,SEC24C	-6103,2849,7894,96142
chr7:111203338-111203636	chr7	+	111203337	111203688	True	NM_032549,NM_018334	chr7,chr7	-,+	IMMP2L,LRRN3	-990,-472327
chr1:159750494-159750763	chr1	+	159750493	159750633	True	NM_017823,NM_000567	chr1,chr1	+,-	DUSP23,CRP	125,-66114
chr11:60414789-60416772	chr11	+	60414960	60416728	True	NR_026946,NM_004778	chr11,chr11	+,-	C11orf64,GPR44	-31787,206766
chr16:9185045-9185336	chr16	+	9185262	9185356	True	NM_003470,NM_014117	chr16,chr16	-,+	USP7,C16orf72	-127921,180
chr3:38060420-38061287	chr3	+	38060581	38061137	True	NR_024071,NM_001130964,NM_007335	chr3,chr3,chr3	-,-,+	PLCD1,PLCD1,DLEC1	5191,5191,19558
chr1:156400485-156400792	chr1	+	156400664	156400828	True	NM_006365,NR_026549	chr1,chr1	-,+	C1orf61,RHBG	-1480,-61723
chr2:54009286-54010082	chr2	+	54009359	54009917	True	NM_001127398,NM_145863,NM_016115,NM_001127397,NM_015701,NM_001201965	chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,+,+,-	ERLEC1,ASB3,ASB3,ERLEC1,ERLEC1,ASB3	4150,4279,4279,4150,4150,4118
chr1:214451251-214452963	chr1	+	214451440	214452613	True	NM_020197,NM_005401	chr1,chr1	+,-	SMYD2,PTPN14	1951,272474
chr12:95397501-95397845	chr12	+	95397576	95397746	True	NR_036685,NM_018838	chr12,chr12	+,-	KRT19P2,NDUFA12	-169397,-65
chr16:85063904-85065760	chr16	+	85063943	85065591	True	NM_017740,NM_014732	chr16,chr16	-,+	ZDHHC7,KIAA0513	-18802,-2584
chr9:46687537-46687754	chr9	+	46687592	46687664	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-3056862,-77
chr9:46687537-46687754	chr9	-	42019377	42019449	False	NR_003670,NM_001012421	chr9,chr9	-,+	KGFLP2,ANKRD20A2	185,348853
chr17:36908208-36909027	chr17	+	36908330	36909072	True	NM_007144,NM_002795	chr17,chr17	-,+	PCGF2,PSMB3	-3772,57
chr3:48482208-48482492	chr3	+	48482246	48482418	True	NM_024661,NM_130384,NM_015933,NM_032166	chr3,chr3,chr3,chr3	-,+,+,+	CCDC51,ATRIP,CCDC72,ATRIP	-717,5799,-611,5799
chrX:48810241-48811514	chrX	+	48810320	48811374	True	NM_001167992,NM_001136159,NM_001136158,NM_001136157,NM_017602	chrX,chrX,chrX,chrX,chrX	+,-,-,-,-	PQBP1,OTUD5,OTUD5,OTUD5,OTUD5	-54597,4324,3569,3569,3569
chr1:224307132-224308487	chr1	+	224307259	224308202	True	NM_001136115,NR_031574,NM_015176	chr1,chr1,chr1	+,-,+	FBXO28,MIR320B2,FBXO28	-5520,136700,-5520
chr11:125756660-125757123	chr11	+	125756830	125757134	True	NM_001134793,NM_145014,NM_031307	chr11,chr11,chr11	+,+,-	HYLS1,HYLS1,PUS3	-16,-3378,16032
chr12:21241509-21242624	chr12	+	21241574	21242642	True	NM_021094,NM_006446	chr12,chr12	-,+	SLCO1A2,SLCO1B1	245240,41485
chr1:43823432-43824062	chr1	+	43823559	43824061	True	NM_022821,NM_001255	chr1,chr1	-,+	ELOVL1,CDC20	9688,564
chr14:33404247-33404562	chr14	+	33404367	33404593	True	NM_001164749,NM_001165893,NR_027263,NM_173159,NM_022123	chr14,chr14,chr14,chr14,chr14	+,+,-,+,+	NPAS3,NPAS3,C14orf128,NPAS3,NPAS3	3865,3865,-858462,3865,3865
chr1:62662423-62664417	chr1	+	62662664	62664437	True	NM_181712,NM_001164835,NM_019079	chr1,chr1,chr1	-,+,+	KANK4,L1TD1,L1TD1	120696,-2241,-2241
chr9:46284035-46284826	chr9	+	46284275	46284339	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2653545,403226
chr9:46284035-46284826	chr9	+	67693202	67693266	False	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	100973,233494
chr9:46284035-46284826	chr9	+	44772081	44772135	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	218100,-1141351
chr9:46284035-46284826	chr9	-	45098887	45098951	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-108702,-1468157
chr17:8923895-8924241	chr17	+	8923947	8924203	True	NM_004822,NM_001142633	chr17,chr17	+,-	NTN1,PIK3R5	655,-54923
chr15:38561655-38562267	chr15	+	38561844	38562086	True	NM_152594,NM_001128602	chr15,chr15	+,-	SPRED1,RASGRP1	-16852,294971
chr11:65764603-65766300	chr11	+	65764834	65766157	True	NM_003860,NM_001143985,NM_032325	chr11,chr11,chr11	+,+,-	BANF1,BANF1,EIF1AD	3392,3392,3478
chr17:4856849-4858130	chr17	+	4856892	4857619	True	NM_005022,NM_001976,NM_001193503,NM_053013	chr17,chr17,chr17,chr17	-,+,+,+	PFN1,ENO3,ENO3,ENO3	-5067,-2559,-2559,-2559
chrX:20008824-20009025	chrX	+	20008836	20009002	True	NR_024440,NM_001173456	chrX,chrX	-,+	LOC729609,PDHA1	-939,-646876
chr5:175110580-175110862	chr5	+	175110648	175110898	True	NM_022304,NM_000794	chr5,chr5	+,-	HRH2,DRD1	-2235,-239485
chr7:66339058-66339399	chr7	+	66339157	66339217	True	NR_003934,NM_017994	chr7,chr7	-,+	LOC729156,C7orf42	-29344,46985
chr10:56516878-56517133	chr10	+	56516926	56517041	True	NM_001190478,NM_001142771	chr10,chr10	+,-	MTRNR2L5,PCDH15	841708,44067
chr17:79792332-79792676	chr17	+	79792460	79792526	True	NM_001007533,NM_000160,NM_001093767,NM_207368	chr17,chr17,chr17,chr17	-,+,-,-	DYSFIP1,GCGR,FAM195B,FAM195B	450,-30501,-1293,-1293
chr15:40209627-40209968	chr15	+	40209826	40209950	True	NM_007223,NM_001013703	chr15,chr15	-,+	GPR176,EIF2AK4	3193,16396
chr2:238498832-238499122	chr2	+	238498854	238499116	True	NM_015893,NM_022449,NR_033308	chr2,chr2,chr2	+,-,-	PRLH,RAB17,RAB17	-23691,703,703
chr17:49240566-49241269	chr17	+	49240628	49240816	True	NM_001198682,NM_002512,NM_003971,NM_001018136,NM_001018137,NR_037149,NM_000269,NM_198175,NM_001018138,NM_001018139	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,-,+,+,+,+,+,+,+	NME2,NME2,SPAG9,NME1-NME2,NME2,NME1-NME2,NME1,NME1,NME2,NME2	2816,2816,-42402,-9782,1979,-9782,-9759,-9759,3266,3045
chr17:46182782-46184139	chr17	+	46183200	46183818	True	NM_001127228,NM_152244,NM_006807,NM_013323	chr17,chr17,chr17,chr17	-,+,-,+	CBX1,SNX11,CBX1,SNX11	-4317,1101,-4640,1128
chr14:32738734-32739533	chr3	+	44792762	44793103	False	NM_020242,NM_020696	chr3,chr3	+,-	KIF15,KIAA1143	10105,10121
chr14:32738734-32739533	chr14	+	32738828	32739561	True	NR_027263,NM_004274	chr14,chr14	-,+	C14orf128,AKAP6	-192923,58917
chr8:72753590-72753993	chr8	+	72753622	72753928	True	NM_005098,NR_033651,NR_033652	chr8,chr8,chr8	-,+,+	MSC,LOC100132891,LOC100132891	2853,2422,1429
chr1:205769657-205770418	chr1	+	205769764	205770458	True	NM_173854,NM_181644	chr1,chr1	-,+	SLC41A1,MFSD4	11753,-231703
chr1:16956879-16957140	chr1	+	16957006	16957070	True	NR_026752,NR_027504	chr1,chr1	-,+	CROCCP2,MST1P2	381,14998
chr5:142003778-142005114	chr5	+	142004005	142004886	True	NM_001144892,NM_001135608	chr5,chr5	-,+	FGF1,ARHGAP26	-3098,145405
chr18:32557238-32557476	chr18	+	32557250	32557472	True	NM_001143827,NM_001143826,NM_001112734	chr18,chr18,chr18	+,+,-	MAPRE2,MAPRE2,ZSCAN30	735,-409,312774
chr1:1657160-1657455	chr1	+	1657292	1657364	True	NM_024011,NM_033489,NM_033488,NR_002946,NM_033487,NM_033486,NM_033492,NM_033493,NM_033529	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,-,-,-,-	CDK11A,CDK11B,CDK11B,MMP23A,CDK11B,CDK11B,CDK11B,CDK11B,CDK11A	-1501,-1517,-1517,-25965,-1517,-1517,-1517,-1517,-1501
chr1:1657160-1657455	chr1	+	1592003	1592075	False	NM_001110781,NR_002946	chr1,chr1	-,+	SLC35E2B,MMP23A	32222,-23895
chr2:24164869-24165380	chr2	+	24165051	24165283	True	NM_181713,NM_017552	chr2,chr2	+,-	UBXN2A,ATAD2B	-1731,-15117
chr8:12803167-12804803	chr8	+	12803336	12804834	True	NM_020844,NR_015383	chr8,chr8	+,-	KIAA1456,LOC340357	-204,-134426
chr19:3628781-3629689	chr19	+	3628957	3629444	True	NM_021231,NM_001080543,NM_133261	chr19,chr19,chr19	-,-,+	C19orf29,C19orf29,GIPC3	-2144,-2144,-43447
chr7:104569246-104569874	chr7	+	104569297	104569813	True	NM_018682,NR_027374	chr7,chr7	+,-	MLL5,LOC723809	84823,-2205
chr2:171790869-171792379	chr2	+	171791078	171792428	True	NM_015530,NM_001136555,NM_001201428	chr2,chr2,chr2	+,-,+	GORASP2,TLK1,GORASP2	-6094,131105,-6182
chr8:96284549-96284928	chr8	+	96284834	96284966	True	NM_177965,NM_024613	chr8,chr8	-,+	C8orf37,PLEKHF2	-3372,-138946
chr16:9058755-9059256	chr16	+	9058781	9059092	True	NM_003470,NM_014117	chr16,chr16	-,+	USP7,C16orf72	-1440,126444
chr5:146382878-146384749	chr5	+	146382921	146384774	True	NM_145001,NM_181674	chr5,chr5	+,-	STK32A,PPP2R2B	229804,50977
chr1:45803942-45804728	chr1	+	45803963	45804777	True	NM_001128425,NM_012222,NM_025077,NM_001048174,NM_001048173,NM_001048172,NM_001048171	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,+,-,-,-,-	MUTYH,MUTYH,TOE1,MUTYH,MUTYH,MUTYH,MUTYH	1415,1415,564,902,1060,1060,1415
chr12:6557434-6558252	chr12	+	6557473	6558058	True	NM_001242,NM_018009,NR_015382	chr12,chr12,chr12	+,+,-	CD27,TAPBPL,LOC678655	-3473,3118,2684
chr13:113302113-113302516	chr13	+	113302244	113302478	True	NM_207440,NM_006322	chr13,chr13	+,-	C13orf35,TUBGCP3	-940,-59763
chr17:74237443-74237848	chr17	+	74237442	74237678	True	NM_052916,NM_182565	chr17,chr17	-,+	RNF157,FAM100B	-1052,23607
chr1:207293748-207294402	chr1	+	207293785	207294399	True	NM_018566,NM_000715	chr1,chr1	-,+	YOD1,C4BPA	-69363,-16229
chr16:89687945-89688751	chr16	+	89688140	89688776	True	NM_001083314,NM_001128141,NM_004413	chr16,chr16,chr16	-,+,+	CHMP1A,DPEP1,DPEP1	35403,-8475,-1191
chr1:43734648-43734915	chr1	+	43734656	43734855	True	NM_182517,NM_144626	chr1,chr1	-,+	C1orf210,TMEM125	16446,809
chr2:170514082-170515290	chr2	+	170514269	170515249	True	NM_001085447,NM_001008489	chr2,chr2	-,+	C2orf77,PHOSPHO2	35742,35714
chr9:130861496-130862167	chr9	+	130861762	130862198	True	NM_052901,NR_033374,NM_001006643,NM_001006642	chr9,chr9,chr9,chr9	+,-,+,+	SLC25A25,LOC100289019,SLC25A25,SLC25A25	-996,18865,-977,-7685
chr1:202130098-202130314	chr1	+	202130162	202130318	True	NR_002930,NR_037663,NR_037664,NM_001199797,NM_080588,NM_002832	chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,-,-,-	PTPRVP,PTPN7,PTPN7,PTPN7,PTPN7,PTPN7	6860,448,448,448,-1043,448
chrX:48334301-48334523	chrX	+	48334305	48334539	True	NM_012280,NM_033518,NM_177439,NM_177434	chrX,chrX,chrX,chrX	+,-,+,+	FTSJ1,SLC38A5,FTSJ1,FTSJ1	9,-5661,9,1840
chr22:36903318-36904172	chr22	+	36903414	36903928	True	NM_001102371,NM_024955,NM_145343	chr22,chr22,chr22	-,-,+	FOXRED2,FOXRED2,APOL1	-266,-324,-254348
chr20:44073356-44074471	chr20	+	44073671	44074513	True	NM_006103,NM_014477	chr20,chr20	+,-	WFDC2,TP53TG5	23880,-66714
chr4:41993018-41994169	chr4	+	41993053	41994072	True	NM_006345,NM_001159547,NM_001029955	chr4,chr4,chr4	+,-,+	SLC30A9,BEND4,DCAF4L1	-581,160874,-9391
chr6:108276659-108278609	chr6	+	108276737	108278469	True	NM_007214,NM_003269	chr6,chr6	-,+	SEC63,NR2E1	1067,208745
chr12:93326967-93328521	chr12	+	93327140	93328214	True	NM_001004330,NM_003566	chr12,chr12	+,-	PLEKHG7,EEA1	-196934,-4033
chr2:219247592-219247822	chr2	+	219247607	219247805	True	NM_022152,NM_000578	chr2,chr2	-,+	TMBIM1,SLC11A1	-90327,-906
chr16:15490198-15490544	chr16	+	15490416	15490532	True	NM_001128423,NR_037466,NM_173803	chr16,chr16,chr16	+,-,+	MPV17L,MIR3180-4,MPV17L	-856,-241557,-856
chr6:42885581-42885916	chr6	+	42885580	42885648	True	NM_138296,NM_001008739	chr6,chr6	+,-	PTCRA,C6orf226	-1911,-27026
chr5:95767042-95767766	chr5	+	95767183	95767795	True	NM_001190442,NM_001177875,NM_000439	chr5,chr5,chr5	+,-,-	CAST,PCSK1,PCSK1	229945,118,1240
chr9:4679103-4679324	chr9	+	4679114	4679372	True	NM_017913,NM_001039395	chr9,chr9	+,-	CDC37L1,C9orf68	193,-12440
chr6:44315904-44316839	chr6	+	44316060	44316416	True	NM_145026,NM_020745	chr6,chr6	+,-	SPATS1,AARS2	-5727,-34997
chr19:17908596-17910118	chr19	+	17908659	17910047	True	NM_014256,NM_005543	chr19,chr19	+,-	B3GNT3,INSL3	-2791,22323
chr2:131851809-131852097	chr2	+	131851830	131852022	True	NM_001100623,NM_001009993	chr2,chr2	+,-	PLEKHB2,FAM168B	10397,-826
chr1:60280135-60280383	chr1	+	60280249	60280365	True	NM_000775,NM_015888	chr1,chr1	-,+	CYP2J2,HOOK1	112108,167
chr3:196755525-196756013	chr3	+	196755665	196755943	True	NR_024388,NM_005929,NM_033316	chr3,chr3,chr3	+,-,-	LOC152217,MFI2,MFI2	-86222,794,793
chr22:19472726-19474492	chr22	+	19472892	19474120	True	NM_005659,NM_001178010,NM_001178011,NM_001035247,NM_003504	chr22,chr22,chr22,chr22,chr22	-,+,+,-,+	UFD1L,CDC45,CDC45,UFD1L,CDC45	-6154,-5542,-5542,-6154,-5540
chr5:70324450-70324845	chr5	+	70324560	70324652	True	NM_004536,NM_022892,NM_022877	chr5,chr5,chr5	-,-,+	NAIP,NAIP,SMN2	-3619,-3619,-103843
chr5:70324450-70324845	chr5	-	68894881	68894973	False	NR_027439,NM_001042490	chr5,chr5	-,+	LOC100272216,GTF2H2D	34105,-38858
chr5:70324450-70324845	chr5	-	69750024	69750116	False	NR_033417,NR_033968	chr5,chr5	+,-	GTF2H2B,LOC100049076	-38878,101084
chr14:94669174-94669993	chr14	+	94669454	94670032	True	NM_032036,NM_058237	chr14,chr14	-,+	IFI27L2,PPP4R4	-73497,-28870
chr17:62972052-62972252	chr17	+	62972082	62972288	True	NR_026903,NM_001165933	chr17,chr17	-,+	AMZ2P1,RGS9	-379,161167
chr16:67145010-67145614	chr16	+	67145038	67145501	True	NM_025187,NM_033309	chr16,chr16	+,-	C16orf70,B3GNT9	-1174,39451
chr17:38081184-38082952	chr17	+	38081305	38082791	True	NM_139280,NM_001042471,NM_018530,NM_001165959,NM_001165958,NM_001195545	chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,+	ORMDL3,GSDMB,GSDMB,GSDMB,GSDMB,LOC100505591	1143,-6402,-7512,-6402,-6402,14935
chr16:90131420-90131655	chr5	-	23519813	23519869	True	NM_020227,NM_004061	chr5,chr5	+,-	PRDM9,CDH12	-12146,-666082
chrX:113816222-113816534	chrX	+	113816240	113816543	True	NM_000868,NM_000640	chrX,chrX	+,-	HTR2C,IL13RA2	2007,435715
chr3:126421652-126422258	chr3	+	126421806	126422248	True	NM_032343,NM_052883	chr3,chr3	+,-	CHCHD6,TXNRD3	869,-47839
chr9:35818589-35818908	chr9	+	35818629	35818945	True	NM_001039592,NM_016446,NM_032593,NM_001012446,NM_172312	chr9,chr9,chr9,chr9,chr9	-,+,-,-,-	SPAG8,TMEM8B,HINT2,C9orf128,SPAG8	-6370,10276,-3587,9849,-6370
chr6:46172825-46173476	chr6	+	46173048	46173504	True	NM_014936,NM_021572	chr6,chr6	+,-	ENPP4,ENPP5	-75398,-34331
chr7:23220938-23221418	chr7	+	23221114	23221358	True	NM_032581,NM_007342	chr7,chr7	-,+	FAM126A,NUPL2	-167344,87
chr4:16247067-16248421	chr4	+	16247083	16248312	True	NM_153365,NR_027697	chr4,chr4	-,+	TAPT1,FLJ39653	-18922,-18849
chr9:41609711-41610602	chr9	+	41609727	41610363	True	NM_001113541,NR_003528	chr9,chr9	+,-	FAM75A5,LOC653501	-109099,-183
chr9:41609711-41610602	chr9	+	40792418	40792938	False	NR_026801,NM_033160	chr9,chr9	+,-	FAM74A3,ZNF658	-76951,-306
chr9:41609711-41610602	chr9	+	39464709	39465344	False	NM_001040065,NR_003528	chr9,chr9	+,-	FAM75A2,LOC653501	-109061,-183
chr6:29856562-29857421	chr6	+	29856675	29857061	True	NR_001317,NR_001434,NR_001318	chr6,chr6,chr6	-,+,+	HCG4P6,HLA-H,HCG2P7	36417,-1343,9746
chr10:70230363-70230605	chr10	+	70230415	70230645	True	NM_030625,NM_001080449	chr10,chr10	+,-	TET1,DNA2	89471,1139
chr9:34636554-34637455	chr9	+	34636712	34637286	True	NM_147157,NM_005866,NM_000155,NM_001017363	chr9,chr9,chr9,chr9	-,-,+,-	SIGMAR1,SIGMAR1,GALT,ARID3C	532,532,9348,-8701
chr12:31478658-31479101	chr12	+	31478787	31479130	True	NM_021238,NR_026806,NM_001135812,NM_001135811	chr12,chr12,chr12,chr12	-,+,-,-	FAM60A,FLJ13224,FAM60A,FAM60A	41,-1588,79,41
chr11:44588014-44589315	chr11	+	44588093	44589231	True	NM_021926,NM_002231,NM_001024844	chr11,chr11,chr11	-,+,+	ALX4,CD82,CD82	-256377,-1003,-1003
chr10:5932475-5933614	chr10	+	5932829	5933445	True	NM_019046,NM_001009941,NM_178150,NM_001009943,NM_032807	chr10,chr10,chr10,chr10,chr10	-,-,+,-,+	ANKRD16,ANKRD16,FBXO18,ANKRD16,FBXO18	-969,-969,-666,-969,2903
chr19:50554076-50554442	chr19	+	50554082	50554488	True	NM_016440,NR_027257	chr19,chr19	-,+	VRK3,FLJ26850	-25277,-196
chr5:124227569-124228082	chr5	+	124227572	124227966	True	NM_004384,NM_020747	chr5,chr5	+,-	CSNK1G3,ZNF608	-1379830,-146767
chr15:68874551-68875771	chr15	+	68874873	68875561	True	NM_006091,NM_001004439	chr15,chr15	+,-	CORO2B,ITGA11	-3351,-150381
chr17:1945909-1946172	chr17	+	1945930	1945994	True	NR_029674,NR_029625,NM_080822	chr17,chr17,chr17	-,-,+	MIR132,MIR212,OVCA2	7358,7730,-704
chr8:133687775-133688375	chr8	+	133687875	133688399	True	NM_012472,NM_198513	chr8,chr8	-,+	LRRC6,PHF20L1	-62,99204
chr14:105044982-105045384	chr14	+	105045010	105045426	True	NM_207379,NM_001008404	chr14,chr14	-,+	TMEM179,C14orf180	25721,629
chr10:101840504-101841251	chr10	+	101840748	101841195	True	NR_024130,NM_001308	chr10,chr10	+,-	DNMBP-AS1,CPN1	-153834,497
chr11:67291261-67291529	chr11	+	67291263	67291527	True	NM_003977,NM_016366	chr11,chr11	+,-	AIP,CABP2	-40809,-364
chr14:102194447-102194955	chr14	+	102194571	102194821	True	NR_026774,NR_031649	chr14,chr14	+,-	NCRNA00239,MIR1247	1952,-167812
chr2:64067782-64068177	chr2	+	64067785	64068111	True	NM_006759,NM_001001521,NM_001005739	chr2,chr2,chr2	+,+,-	UGP2,UGP2,VPS54	902,-14,178153
chr15:30485115-30485818	chr15	+	30485172	30485636	True	NR_026771,NM_139320	chr15,chr15	+,-	DKFZP434L187,CHRFAM7A	2602,200278
chr15:30485115-30485818	chr15	-	32637464	32637900	False	NR_026859,NM_199357	chr15,chr15	-,+	FAM7A3,ARHGAP11A	89215,269790
chr15:75316329-75316847	chr15	+	75316376	75316644	True	NM_017793,NM_021823	chr15,chr15	-,+	RPP25,PPCDC	-66601,-500
chr3:32608201-32609189	chr3	+	32608468	32609011	True	NM_016141,NM_015442	chr3,chr3	-,+	DYNC1LI1,CNOT10	3412,117686
chr6:41754808-41755196	chr6	+	41754829	41755209	True	NM_001134493,NM_013397,NM_006653	chr6,chr6,chr6	+,+,-	TOMM6,PRICKLE4,FRS3	-29,-6380,-7199
chr5:140731249-140731565	chr5	+	140731249	140731351	True	NM_032095,NM_018923,NM_018922,NM_032096,NM_005642,NM_032053,NM_032011,NM_018916,NM_018917	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,-,+,+,+,+	PCDHGB1,PCDHGB2,PCDHGB1,PCDHGB2,TAF7,PCDHGA4,PCDHGA3,PCDHGA3,PCDHGA4	-1472,8351,-1472,8351,-30898,3416,-7699,-7699,3416
chr18:28622102-28622538	chr18	+	28622142	28622580	True	NM_001941,NM_001942,NM_024423	chr18,chr18,chr18	-,+,-	DSC3,DSG1,DSC3	251,275471,251
chr19:19372753-19373579	chr19	+	19372901	19373497	True	NM_023002,NM_004386	chr19,chr19	-,+	HAPLN4,NCAN	151,-50170
chr12:48553764-48555553	chr12	+	48554039	48555419	True	NM_024095,NM_001013635	chr12,chr12	-,+	ASB8,C12orf68	-2662,21946
chr16:754296-754546	chr16	+	754493	754595	True	NM_153350,NM_024042	chr16,chr16	-,+	FBXL16,METRN	1280,10577
chr20:39654188-39654470	chr20	+	39654216	39654280	True	NM_015035,NM_003286	chr20,chr20	-,+	ZHX3,TOP1	274509,3181
chr5:101833275-101833924	chr5	+	101833329	101833801	True	NM_000919,NM_173488	chr5,chr5	+,-	PAM,SLCO6A1	367725,969
chr20:58530248-58530848	chr20	+	58530332	58530551	True	NM_177980,NM_006242	chr20,chr20	+,-	CDH26,PPP1R3D	2919,-14980
chr7:140178583-140178841	chr7	+	140178645	140178763	True	NM_013446,NM_001008749,NM_001145125	chr7,chr7,chr7	-,+,-	MKRN1,RAB19,MKRN1	656,-74853,656
chr14:62227573-62228047	chr14	+	62227696	62227824	True	NM_001017970,NM_003082	chr14,chr14	-,+	TMEM30B,SNAPC1	-479166,1250
chr21:33449348-33449643	chr21	+	33449388	33449632	True	NR_024352,NR_038033	chr21,chr21	+,-	NCRNA00159,NCRNA00159	2996,9026
chr1:212744580-212745144	chr1	+	212744605	212744745	True	NM_001030287,NM_018664	chr1,chr1	+,-	ATF3,BATF3	-5970,128636
chr7:107224873-107225914	chr7	+	107225251	107225952	True	NR_027830,NM_001161520,NM_001008405,NM_018844	chr7,chr7,chr7,chr7	+,-,+,+	BCAP29,COG5,BCAP29,BCAP29	-4880,-20292,-4098,-4880
chr4:49282207-49283528	chr4	+	49283088	49283458	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-294874,-374273
chr4:49282207-49283528	chr4	-	49330838	49331208	False	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-342624,-422023
chr12:57916223-57916471	chr12	+	57916283	57916345	True	NM_004083,NM_052897,NM_001195053,NM_001195055,NM_001195054,NM_001195057,NM_001195056	chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,+,-,-,-,-,-	DDIT3,MBD6,DDIT3,DDIT3,DDIT3,DDIT3,DDIT3	-1983,313,-1983,-1983,-1983,-1983,-1983
chr15:68520906-68521438	chr15	+	68521151	68521403	True	NM_017882,NM_015322	chr15,chr15	-,+	CLN6,FEM1B	727,48737
chr7:74281823-74282348	chr7	+	74281925	74282098	True	NM_173537,NR_027775	chr7,chr7	-,+	GTF2IRD2,PMS2P5	-14084,24795
chr7:74281823-74282348	chr7	-	74494247	74494304	False	NM_030798,NM_001003795	chr7,chr7	-,+	WBSCR16,GTF2IRD2B	-4548,14042
chr3:56499349-56500019	chr3	+	56499801	56500053	True	NM_015576,NM_001012506	chr3,chr3	-,+	ERC2,CCDC66	2388,91130
chr19:19172782-19173490	chr19	+	19172813	19173424	True	NM_001017392,NM_178526	chr19,chr19	-,+	SUGP2,SLC25A42	-28433,1378
chr3:89170159-89171160	chr3	+	89170484	89171204	True	NM_001195308,NM_005233	chr3,chr3	-,+	CGGBP1,EPHA3	-971468,-13871
chr12:121031666-121031939	chr12	+	121031787	121031967	True	NM_001033677,NM_198202	chr12,chr12	+,-	CABP1,POP5	46454,-12586
chr4:9672629-9672915	chr4	+	9672668	9672784	True	NR_031688,NM_000798	chr4,chr4	-,+	MIR548I2,DRD5	-114731,110473
chrX:13681712-13683568	chrX	+	13681873	13683315	True	NM_001011658,NM_152634	chrX,chrX	-,+	TRAPPC2,TCEANC	69499,-10617
chr19:14545800-14546546	chr19	+	14545845	14546437	True	NM_005804,NM_213560,NM_002741	chr19,chr19,chr19	-,+,+	DDX39A,PKN1,PKN1	-15650,4648,-1730
chr21:44845989-44846261	chr21	+	44846010	44846096	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	23807,956
chr2:113874097-113874430	chr2	+	113874219	113874469	True	NM_000577,NM_173843,NM_173841,NM_173178	chr2,chr2,chr2,chr2	+,+,+,-	IL1RN,IL1RN,IL1RN,IL1F8	1000,1000,1000,-63779
chr13:46758097-46758486	chr13	+	46758123	46758467	True	NM_002298,NM_001164211	chr13,chr13	-,+	LCP1,LRCH1	-1664,368828
chrX:7065326-7065786	chrX	+	7065370	7065740	True	NM_012080,NM_001135565,NM_000351,NM_001178136,NM_001178135	chrX,chrX,chrX,chrX,chrX	-,-,+,-,-	HDHD1,HDHD1,STS,HDHD1,HDHD1	541,541,71731,541,541
chr12:77463881-77464953	chr12	+	77464019	77464915	True	NM_203394,NM_015336	chr12,chr12	-,+	E2F7,ZDHHC17	-4659,-306229
chr6:35226033-35226955	chr6	+	35226144	35226939	True	NM_018679,NM_003427	chr6,chr6	-,+	TCP11,ZNF76	-116957,570
chr1:6552515-6552733	chr1	+	6552593	6552751	True	NM_001042665,NM_001042664,NM_020631,NM_138697,NM_001042663	chr1,chr1,chr1,chr1,chr1	-,-,-,+,-	PLEKHG5,PLEKHG5,PLEKHG5,TAS1R1,PLEKHG5	-6579,-1953,-833,62586,4785
chr3:12334508-12335351	chr3	+	12334525	12335369	True	NM_003256,NM_005037,NM_138711,NM_138712	chr3,chr3,chr3,chr3	-,+,+,+	TIMP4,PPARG,PPARG,PPARG	-133674,-5228,-4141,-5228
chr5:149547737-149547979	chr5	+	149547824	149547966	True	NM_001804,NM_002609	chr5,chr5	+,-	CDX1,PDGFRB	-1531,-12402
chr7:22892916-22893651	chr7	+	22892989	22893603	True	NM_019059,NR_003075	chr7,chr7	-,+	TOMM7,SNORD93	-30568,2628
chr10:99206021-99206474	chr10	+	99206236	99206462	True	NM_016046,NM_032327,NM_198043,NM_198045,NM_198044,NM_198046	chr10,chr10,chr10,chr10,chr10,chr10	-,+,+,+,+,+	EXOSC1,ZDHHC16,ZDHHC16,ZDHHC16,ZDHHC16,ZDHHC16	-468,-357,-357,-357,-357,-340
chr15:52028628-52029275	chr15	+	52028654	52029176	True	NM_153374,NM_001142885	chr15,chr15	-,+	LYSMD2,TMOD2	1198,14581
chr9:86237189-86237716	chr9	+	86237409	86237646	True	NM_001190727,NM_174938,NM_001001551	chr9,chr9,chr9	+,-,+	C9orf103,FRMD3,C9orf103	386,-84061,386
chr6:14930234-14930682	chr6	+	14930396	14930696	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	315830,732643
chr12:41084947-41085915	chr12	+	41085079	41085917	True	NM_175038,NM_001843,NM_052885	chr12,chr12,chr12	+,+,-	CNTN1,CNTN1,SLC2A13	440,440,-585418
chr2:234595358-234596834	chr2	+	234595362	234596695	True	NM_001072,NM_019077,NM_001001394,NM_205862	chr2,chr2,chr2,chr2	+,+,-,+	UGT1A6,UGT1A7,DNAJB3,UGT1A6	4816,-4829,56024,3625
chr18:11694059-11694937	chr18	+	11694157	11694749	True	NM_023075,NM_182978	chr18,chr18	-,+	MPPE1,GNAL	213942,-5072
chr7:94024891-94025303	chr7	+	94024898	94025283	True	NM_001099400,NM_000089	chr7,chr7	-,+	SGCE,COL1A2	260301,-1076
chr19:6735948-6736264	chr19	+	6735997	6736108	True	NM_004240,NM_001080452	chr19,chr19	+,-	TRIP10,GPR108	3598,1582
chr6:161435944-161436629	chr6	+	161435952	161436406	True	NM_006724,NR_024277	chr6,chr6	+,-	MAP3K4,NCRNA00241	-23189,146658
chr17:7492942-7493148	chr17	+	7492978	7493186	True	NM_004870,NM_006942,NR_024603	chr17,chr17,chr17	+,-,+	MPDU1,SOX15,MPDU1	-6064,352,-6064
chr5:25304327-25304968	chr5	+	25304355	25304553	True	NR_037896,NM_020227	chr5,chr5	-,+	LOC340107,PRDM9	-463663,-1796698
chr17:4707960-4708445	chr17	+	4708217	4708367	True	NM_002798,NM_002663,NM_182566	chr17,chr17,chr17	+,+,-	PSMB6,PLD2,VMO1	-8824,2053,-18488
chr7:100185514-100186489	chr7	+	100185899	100186430	True	NM_033506,NM_002319,NM_001163499,NM_012172	chr7,chr7,chr7,chr7	+,-,+,+	FBXO24,LRCH4,FBXO24,FBXO24	-1995,-2123,765,765
chr6:97637291-97637646	chr6	+	97637503	97637701	True	NM_052904,NM_198468	chr6,chr6	+,-	KLHL32,MMS22L	-265065,93407
chr15:58727000-58727828	chr15	+	58727081	58727834	True	NR_002927,NM_000236	chr15,chr15	-,+	HSP90AB4P,LIPC	257547,-2957
chr14:50063925-50064436	chr14	+	50064061	50064368	True	NM_203467,NR_037792,NR_037793,NM_001030001,NM_152329	chr14,chr14,chr14,chr14,chr14	+,+,+,-,+	LRR1,LRR1,LRR1,RPS29,LRR1	1046,1046,1046,-10967,1046
chr9:139748343-139748557	chr9	+	139748402	139748552	True	NM_003792,NM_014172,NM_206920,NM_001080482,NM_001135861	chr9,chr9,chr9,chr9,chr9	-,+,+,+,+	EDF1,PHPT1,MAMDC4,C9orf172,PHPT1	12236,-5197,-1634,-9586,-5197
chr15:83173080-83174479	chr15	+	83173199	83174328	True	NR_026811,NR_033936,NR_033579	chr15,chr15,chr15	-,-,+	LOC80154,LOC727849,LOC440297	8624,8653,-43218
chr15:83173080-83174479	chr15	-	83032702	83033542	False	NR_004847,NR_024474,NM_001164465	chr15,chr15,chr15	+,+,-	UBE2Q2P2,UBE2Q2P3,GOLGA6L10	-8994,-8994,-14504
chr15:83173080-83174479	chr15	-	82656205	82657045	False	NR_004847,NR_024474,NM_001164465	chr15,chr15,chr15	+,+,-	UBE2Q2P2,UBE2Q2P3,GOLGA6L10	-8984,-8984,-14499
chr15:83173080-83174479	chr15	+	82788622	82789751	False	NR_026811,NR_033936,NR_033579	chr15,chr15,chr15	-,-,+	LOC80154,LOC727849,LOC440297	8623,8652,-35227
chr6:29721098-29722589	chr6	+	29721595	29721675	True	NR_026972,NR_026973,NM_001098479,NR_001590	chr6,chr6,chr6,chr6	-,-,+,-	LOC285830,LOC285830,HLA-F,IFITM4P	-4769,-4769,-30541,-2670
chr14:77913661-77914298	chr14	+	77913804	77914009	True	NM_012111,NM_001193314	chr14,chr14	+,-	AHSA1,VIPAR	10363,10037
chr15:75230514-75230747	chr15	+	75230546	75230712	True	NM_002435,NM_004255	chr15,chr15	+,-	MPI,COX5A	-48187,-51
chr19:51487001-51487218	chr19	+	51487073	51487203	True	NM_005046,NM_005551,NM_139277	chr19,chr19,chr19	-,+,-	KLK7,KLK2,KLK7	-3,-110435,-2
chr1:13455235-13455724	chr1	+	13455290	13455628	True	NM_001099854,NM_001024661,NM_001010890	chr1,chr1,chr1	-,-,+	PRAMEF14,PRAMEF13,PRAMEF9	-2634,-2634,-34166
chr1:13455235-13455724	chr1	+	13676126	13676464	False	NM_001099854,NM_001010890	chr1,chr1	-,+	PRAMEF14,PRAMEF9	-2615,-34205
chr19:50379528-50379878	chr19	+	50379616	50379876	True	NM_032375,NM_007254,NM_024682,NM_001168222,NM_001098633,NM_001098632	chr19,chr19,chr19,chr19,chr19,chr19	-,-,+,+,-,-	AKT1S1,PNKP,TBC1D17,TBC1D17,AKT1S1,AKT1S1	752,-8794,805,805,786,818
chr10:13277460-13278303	chr10	+	13277617	13277877	True	NM_145314,NM_182751	chr10,chr10	-,+	UCMA,MCM10	-1289,-74114
chr13:100636738-100637236	chr13	+	100636748	100637272	True	NM_033132,NM_007129	chr13,chr13	-,+	ZIC5,ZIC2	-12570,-2773
chr7:141672499-141673297	chr7	+	141672548	141673278	True	NM_004668,NM_176817	chr7,chr7	+,-	MGAM,TAS2R38	22400,345
chr2:124783826-124784058	chr2	+	124783830	124784045	True	NM_032390,NM_130773	chr2,chr2	-,+	MKI67IP,CNTNAP5	-2289327,-1021
chr20:36795030-36795337	chr20	+	36795088	36795336	True	NM_004613,NM_021215,NM_198951	chr20,chr20,chr20	-,+,-	TGM2,RPRD1B,TGM2	-1388,-133191,-1388
chr4:156784775-156785747	chr4	+	156784823	156785786	True	NM_005651,NM_017419	chr4,chr4	+,-	TDO2,ACCN5	39060,1689
chr3:38688952-38689999	chr3	+	38688998	38689992	True	NM_001160161,NM_001160160,NM_000335,NM_001099405,NM_001099404,NM_005107,NM_198056	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,-,+,-	SCN5A,SCN5A,SCN5A,SCN5A,SCN5A,EXOG,SCN5A	1222,1222,1221,1221,1221,-151286,1221
chr19:42364703-42364989	chr19	+	42364814	42364976	True	NM_001022,NM_173506	chr19,chr19	+,-	RPS19,LYPD4	-878,-16306
chr1:155024311-155024545	chr1	+	155024338	155024562	True	NM_144622,NM_207191,NM_207196,NM_207197,NM_207194,NM_207195,NM_003815	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,+,+,+,+	DCST2,ADAM15,ADAM15,ADAM15,ADAM15,ADAM15,ADAM15	-18081,-627,-627,-627,-627,-627,-627
chr17:7532057-7533390	chr17	+	7532738	7533272	True	NM_001040,NM_133491,NM_001146279,NM_001146280,NM_001146281,NR_027462	chr17,chr17,chr17,chr17,chr17,chr17	+,-,+,+,+,+	SHBG,SAT2,SHBG,SHBG,SHBG,SHBG	180,-1544,180,180,180,-1502
chr17:1646420-1647281	chr17	+	1646472	1647090	True	NM_001165921,NM_001165920,NM_000934,NR_028505	chr17,chr17,chr17,chr17	+,+,+,-	SERPINF2,SERPINF2,SERPINF2,C17orf91	-393,-203,-393,-26906
chr6:26124873-26125958	chr6	+	26124982	26125980	True	NM_003526,NM_003512	chr6,chr6	-,+	HIST1H2BC,HIST1H2AC	-850,-663
chr20:42873417-42874758	chr20	+	42873573	42874781	True	NM_024034,NM_016470	chr20,chr20	+,-	GDAP1L1,C20orf111	1126,-34142
chr16:88521985-88522222	chr16	+	88522080	88522172	True	NM_000101,NM_153813	chr16,chr16	-,+	CYBA,ZFPM1	195335,-2117
chr2:74212780-74213242	chr2	+	74212951	74213273	True	NM_080918,NM_001035505	chr2,chr2	+,-	DGUOK,BOLA3	-59049,161816
chr14:60561340-60561813	chr14	+	60561529	60561850	True	NM_022495,NM_016029	chr14,chr14	+,-	C14orf135,DHRS7	-2963,70411
chr4:154079214-154080092	chr4	+	154079261	154080003	True	NM_001130067,NR_001562	chr4,chr4	+,-	TRIM2,ANXA2P1	-5045,150011
chr10:50822604-50822876	chr10	+	50822667	50822883	True	NM_000124,NM_020984,NM_001142934,NM_001142933,NM_001142929,NM_020549,NM_003055,NM_020985,NM_020986	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,+,+,+,+,+,+,+,+	ERCC6,CHAT,CHAT,CHAT,CHAT,CHAT,SLC18A3,CHAT,CHAT	-75520,-5577,-635,-635,-635,-635,-4371,-1564,-1564
chr1:161412448-161412745	chr1	+	161412456	161412608	True	NM_001136219,NM_001013625	chr1,chr1	+,-	FCGR2A,C1orf192	62596,-74792
chr1:161412448-161412745	chr1	+	161442078	161442198	False	NM_000569,NM_001136219	chr1,chr1	-,+	FCGR3A,FCGR2A	77670,33006
chr1:161412448-161412745	chr1	+	161434665	161434817	False	NM_000569,NM_001136219	chr1,chr1	-,+	FCGR3A,FCGR2A	85051,40387
chr1:161412448-161412745	chr1	+	161419874	161420026	False	NM_001136219,NM_001013625	chr1,chr1	+,-	FCGR2A,C1orf192	55178,-82210
chr1:161412448-161412745	chr1	+	161427255	161427407	False	NM_001136219,NM_001013625	chr1,chr1	+,-	FCGR2A,C1orf192	47797,-89591
chr4:148537114-148537376	chr4	+	148537340	148537414	True	NM_018241,NM_138364	chr4,chr4	+,-	TMEM184C,PRMT10	1124,67916
chr22:37824431-37825506	chr22	+	37824533	37825437	True	NM_152243,NM_052906	chr22,chr22	+,-	CDC42EP1,ELFN2	131033,-1028
chr22:33402632-33403421	chr22	+	33402764	33403184	True	NM_003490,NM_000362,NM_133633	chr22,chr22,chr22	-,+,-	SYN3,TIMP3,SYN3	4,-206013,4
chr17:1396376-1396755	chr17	+	1396432	1396656	True	NM_001080779,NM_001080950,NR_028514,NM_033375	chr17,chr17,chr17,chr17	-,-,+,-	MYO1C,MYO1C,LOC100306951,MYO1C	-431,-7381,23556,-1460
chr4:6576536-6576800	chr4	+	6576545	6576617	True	NM_020416,NM_015274	chr4,chr4	-,+	PPP2R2C,MAN2B2	-102219,284
chr4:166129153-166130015	chr4	+	166129453	166130055	True	NM_001161522,NM_007246,NM_001161521,NR_026575	chr4,chr4,chr4,chr4	+,+,+,-	KLHL2,KLHL2,KLHL2,GK3P	1115,-734,1115,71170
chr10:38253415-38255264	chr10	+	38253460	38254648	True	NM_145011,NM_006954	chr10,chr10	-,+	ZNF25,ZNF33A	10863,44929
chr19:45827074-45827993	chr19	+	45827196	45827998	True	NM_001824,NM_177417	chr19,chr19	-,+	CKM,KLC3	-963,15999
chr8:22960255-22960570	chr8	+	22960342	22960522	True	NM_003841,NR_027140	chr8,chr8	+,-	TNFRSF10C,TNFRSF10B	-66,-33642
chr13:28494787-28495027	chr13	+	28494786	28495074	True	NM_000209,NM_001265	chr13,chr13	+,-	PDX1,CDX2	-669,48293
chr8:66681337-66681985	chr8	+	66681609	66681818	True	NM_002603,NM_001145838	chr8,chr8	-,+	PDE7A,MTFR1	19560,-99565
chr19:53398047-53398437	chr19	+	53398237	53398436	True	NM_152473,NM_207333	chr19,chr19	+,-	HERV-V1,ZNF320	118907,-3638
chr10:30724766-30725382	chr10	+	30724831	30725375	True	NR_003524,NM_005204	chr10,chr10	-,+	LOC729668,MAP3K8	-61454,-2016
chr5:176827700-176828518	chr5	+	176827741	176828445	True	NM_001029886,NM_000505,NM_003052	chr5,chr5,chr5	-,-,+	PFN3,F12,SLC34A1	-104,8182,-16360
chr4:95707780-95708537	chr4	+	95708197	95708458	True	NM_001203,NM_014485	chr4,chr4	+,-	BMPR1B,HPGDS	-29120,-444170
chr16:75568997-75569380	chr16	+	75569000	75569316	True	NM_024533,NM_007285	chr16,chr16	-,+	CHST5,GABARAPL2	-20,30932
chr14:102767669-102768703	chr14	+	102767684	102768152	True	NM_014226,NM_018335	chr14,chr14	-,+	RAGE,ZNF839	3433,17943
chr20:651120-652237	chr20	+	651164	652006	True	NM_033129,NM_001042353	chr20,chr20	-,+	SCRT2,FAM110A	4867,162349
chr1:1114653-1114874	chr1	+	1114669	1114751	True	NM_004195,NM_153254,NM_001130045	chr1,chr1,chr1	-,+,+	TNFRSF18,TTLL10,TTLL10	27388,325,-5434
chr15:63338575-63339268	chr15	+	63338586	63339229	True	NM_001018006,NM_001018007,NM_001018004,NM_001018005,NM_001018008,NM_000366,NM_001018020,NM_015920	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,-	TPM1,TPM1,TPM1,TPM1,TPM1,TPM1,TPM1,RPS27L	-3800,-3800,-3800,-3800,1406,-3800,-3800,110562
chr19:50095689-50095987	chr19	+	50095710	50095978	True	NM_015953,NM_020719	chr19,chr19	-,+	NOSIP,PRR12	-11907,-849
chr7:97912177-97912514	chr7	+	97912223	97912555	True	NM_001159491,NM_015395,NM_015379	chr7,chr7,chr7	+,-,+	BRI3,TECPR1,BRI3	-1295,-30755,-1295
chr9:119435584-119436666	chr9	+	119435584	119436678	True	NM_198186,NM_001099679	chr9,chr9	-,+	ASTN2,TRIM32	12866,12902
chr1:234041419-234041658	chr1	+	234041429	234041683	True	NM_173508,NM_005646	chr1,chr1	+,-	SLC35F3,TARBP1	-801,573216
chrY:24444594-24445688	chrY	+	24444619	24445690	True	NM_152585,NR_001541,NR_002193	chrY,chrY,chrY	+,-,+	RBMY1F,TTTY5,RBMY2FP	9319,36,9315
chr16:11681272-11681601	chr16	+	11681346	11681540	True	NM_003498,NM_004862,NR_024320,NM_001136472,NM_001136473	chr16,chr16,chr16,chr16,chr16	+,-,-,-,-	SNN,LITAF,LITAF,LITAF,LITAF	80748,-1117,-24,-540,-540
chr15:65501561-65502969	chr15	+	65501666	65502630	True	NM_001101362,NM_003613	chr15,chr15	+,-	KBTBD13,CILP	-132563,1260
chrX:152802622-152802936	chrX	+	152802702	152802944	True	NM_001130997,NM_001001344,NM_021949	chrX,chrX,chrX	-,+,+	FAM58A,ATP2B3,ATP2B3	61738,-1173,-1173
chr1:64681334-64682227	chr1	+	64681425	64682232	True	NM_152489,NM_014288	chr1,chr1	+,-	UBE2U,ITGB3BP	-11986,-692590
chr12:72145627-72147226	chr12	+	72145701	72146970	True	NM_014999,NM_144982	chr12,chr12	+,-	RAB21,ZFC3H1	1687,-87952
chr2:233896437-233897015	chr2	+	233896478	233897010	True	NM_005383,NM_019850	chr2,chr2	+,-	NEU2,NGEF	371,-18527
chr12:116715898-116716407	chr12	+	116716011	116716407	True	NR_027345,NM_015335	chr12,chr12	+,-	NCRNA00173,MED13L	254819,-1020
chr12:56727977-56728277	chr12	+	56727977	56728312	True	NM_001127460,NM_014871,NM_001166279,NM_016584	chr12,chr12,chr12,chr12	-,-,-,+	PAN2,PAN2,PAN2,IL23A	-444,-140,-140,4350
chr5:40834938-40835191	chr5	+	40834937	40835171	True	NM_032587,NR_002583,NR_037665,NM_000997	chr5,chr5,chr5,chr5	+,-,-,-	CARD6,SNORD72,LOC100506548,RPL37	6238,-2100,-5693,266
chrX:35972118-35973340	chrX	+	35972244	35973268	True	NM_152632,NM_031442	chrX,chrX	+,-	CXorf22,TMEM47	-34457,-1296839
chr2:40007582-40008051	chr2	+	40007711	40008081	True	NM_152390,NM_025264,NR_028102	chr2,chr2,chr2	+,-,-	TMEM178,THUMPD2,THUMPD2	-114731,-1295,-1295
chr16:64292715-64293839	chr16	+	64292766	64293460	True	NM_001795,NM_001797	chr16,chr16	+,-	CDH5,CDH11	2107064,862517
chr14:52342006-52343225	chr14	+	52342037	52343226	True	NM_007361,NM_053064	chr14,chr14	-,+	NID2,GNG2	192771,-15042
chr16:70207483-70207741	chr16	+	70207504	70207738	True	NR_033959,NM_173619	chr16,chr16	-,+	LOC729513,CLEC18C	52248,189
chr16:70207483-70207741	chr16	+	69984592	69984656	False	NM_001136214,NR_003610,NM_182619	chr16,chr16,chr16	+,-,+	CLEC18A,PDXDC2P,CLEC18A	-17,115245,153
chr16:70207483-70207741	chr16	-	74455802	74455866	False	NM_001011880,NM_002811	chr16,chr16	-,+	CLEC18B,PSMD7	-434,-125180
chr13:80914714-80914940	chr13	+	80914779	80914901	True	NM_019080,NM_005842	chr13,chr13	+,-	NDFIP2,SPRY2	-859571,235
chr19:50181135-50181513	chr19	+	50181134	50181513	True	NM_001571,NM_198318,NM_001536,NR_033397	chr19,chr19,chr19,chr19	-,+,+,+	IRF3,PRMT1,PRMT1,PRMT1	-12002,-689,-689,-689
chr4:57844947-57845265	chr4	+	57844957	57845215	True	NM_032313,NM_000938	chr4,chr4	-,+	C4orf14,POLR2B	-1131,29
chr21:42687858-42688504	chr21	+	42687914	42688472	True	NM_058186,NM_206964,NM_182832	chr21,chr21,chr21	+,+,-	FAM3B,FAM3B,PLAC4	188,188,-130748
chr19:36003585-36004198	chr19	+	36003684	36004134	True	NM_001126059,NM_001190348,NM_001126058,NM_001126057,NM_001126056,NM_001190349,NM_001190347,NR_033746,NM_014364,NM_033317	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,-,+,-	DMKN,DMKN,DMKN,DMKN,DMKN,DMKN,DMKN,DMKN,GAPDHS,DMKN	-2293,476,476,476,476,476,476,-2272,20179,476
chr8:16046192-16047699	chr8	+	16046500	16046582	True	NM_002445,NM_138716,NM_138715,NM_178234	chr8,chr8,chr8,chr8	-,-,-,+	MSR1,MSR1,MSR1,TUSC3	3776,3776,3776,-648968
chr12:38710778-38711883	chr12	+	38711109	38711885	True	NM_001013620,NM_153634	chr12,chr12	+,-	ALG10B,CPNE8	-603,587585
chr9:126117126-126117353	chr9	+	126117193	126117351	True	NM_173689,NR_030332	chr9,chr9	+,-	CRB2,MIR601	1096,47581
chr2:231235639-231237160	chr2	+	231235846	231236885	True	NM_138402,NM_003113,NM_001185015	chr2,chr2,chr2	+,+,-	SP140L,SP100,SP110	-44010,43985,-145402
chr9:35404103-35404478	chr9	+	35404178	35404450	True	NM_001099951,NR_003582,NR_003581	chr9,chr9,chr9	-,+,+	FAM166B,ATP8B5P,ATP8B5P	159496,2301,2314
chr16:68877367-68877607	chr16	+	68877471	68877607	True	NM_001040146,NM_024562	chr16,chr16	-,+	CHTF8,TMCO7	288505,-13
chr5:179780157-179780366	chr5	+	179780180	179780382	True	NM_005110,NM_015455	chr5,chr5	-,+	GFPT2,CNOT6	-17,141034
chr5:6318731-6319447	chr5	+	6318993	6319485	True	NM_001145161,NR_028351	chr5,chr5	+,-	UBE2QL1,FLJ33360	129250,17970
chr5:191490-191718	chr5	+	191491	191703	True	NM_145265,NM_001080478	chr5,chr5	-,+	CCDC127,LRRC14B	26644,6
chr8:22423911-22425658	chr8	+	22423951	22425247	True	NR_027715,NM_001018003	chr8,chr8	-,+	FLJ14107,SORBS3	74525,-823
chr1:29555873-29557219	chr1	+	29556139	29557097	True	NM_016011,NM_133177,NM_133178,NM_001195001,NM_001024732,NM_005704	chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,+,-,+	MECR,PTPRU,PTPRU,PTPRU,MECR,PTPRU	407,5930,5930,5930,407,5930
chr3:136581973-136582797	chr3	+	136581972	136582670	True	NM_006153,NM_005862	chr3,chr3	+,-	NCK1,STAG1	-978,-110727
chr1:76070701-76071509	chr1	+	76070957	76071523	True	NM_000016,NM_001130058,NM_152697	chr1,chr1,chr1	+,-,-	ACADM,SLC44A5,SLC44A5	118519,5326,5326
chr6:35743433-35743959	chr6	+	35743451	35743778	True	NM_001010886,NM_207409,NM_001832	chr6,chr6,chr6	+,+,-	C6orf127,C6orf126,CLPS	5052,613,21375
chr18:44676279-44676626	chr18	+	44676377	44676615	True	NM_032124,NM_031303	chr18,chr18	-,+	HDHD2,KATNAL2	306,-149641
chr19:53602749-53603717	chr19	+	53602763	53603459	True	NM_001191055,NM_033288,NM_001102603,NM_198893	chr19,chr19,chr19,chr19	+,-,-,-	HERV-V2,ZNF160,ZNF160,ZNF160	-54824,3280,3280,3280
chr5:10594488-10595074	chr5	+	10594626	10595048	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-30246,166389
chr22:27052447-27052719	chr22	+	27052579	27052728	True	NR_033321,NR_003491,NR_033320,NM_001887,NR_033319	chr22,chr22,chr22,chr22,chr22	+,+,+,-,+	MIAT,MIAT,MIAT,CRYBB1,MIAT	717,717,717,-38588,717
chr10:105240100-105240864	chr10	+	105240205	105240905	True	NM_001129742,NM_004210	chr10,chr10	-,+	CALHM3,NEURL	-1208,12829
chr8:63161239-63161459	chr8	+	63161238	63161475	True	NM_173688,NM_001164756	chr8,chr8	+,-	NKAIN3,ASPH	25,-534039
chrX:100546361-100546776	chrX	+	100546403	100546577	True	NM_024885,NM_001939,NM_001168474	chrX,chrX,chrX	-,+,-	TAF7L,DRP2,TAF7L	1532,-71521,-78
chr9:14987583-14989554	chr9	+	14987851	14989493	True	NR_003920,NM_144966	chr9,chr9	+,-	LOC389705,FREM1	3831,-76858
chr10:81108089-81109111	chr10	+	81108172	81109110	True	NM_005729,NM_153367	chr10,chr10	+,-	PPIF,ZCCHC24	-1003,96323
chr3:52931837-52933749	chr3	+	52931900	52933466	True	NM_001198974,NM_198563,NM_002217	chr3,chr3,chr3	-,-,+	TMEM110-MUSTN1,TMEM110,ITIH3	-303,-303,-103174
chr19:57901514-57902125	chr19	+	57901605	57902158	True	NM_001172773,NM_020633,NM_152909	chr19,chr19,chr19	+,-,+	ZNF548,VN1R1,ZNF548	-438,65999,-438
chr4:145566554-145566784	chr4	+	145566560	145566772	True	NR_037595,NM_022475	chr4,chr4	-,+	LOC646576,HHIP	449,375
chr18:55397076-55398838	chr18	+	55397215	55398863	True	NM_005603,NM_004852	chr18,chr18	-,+	ATP8B1,ONECUT2	71515,-294349
chr15:25299772-25300445	chr15	+	25299795	25300459	True	NR_003317,NR_003316,NR_003320,NR_003321,NR_003324,NR_003322,NR_003319,NR_003318,NM_130838	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,-	SNORD116-2,SNORD116-1,SNORD116-5,SNORD116-6,SNORD116-9,SNORD116-7,SNORD116-4,SNORD116-3,UBE3A	-490,-3223,7019,9712,1546,7019,4224,1546,350244
chr14:103013328-103014215	chr14	+	103013670	103013932	True	NM_152326,NR_036192	chr14,chr14	-,+	ANKRD9,MIR4309	-37542,-7740
chr17:7346807-7347121	chr17	+	7346841	7347169	True	NM_004112,NM_001128833,NM_178518,NM_000747	chr17,chr17,chr17,chr17	+,-,+,+	FGF11,ZBTB4,TMEM102,CHRNB1	-4204,35825,-8131,1236
chr4:140215743-140216177	chr4	+	140216084	140216208	True	NM_001184987,NM_001184986,NM_001184990,NM_001184991,NM_001184989,NM_001184988,NM_057175,NM_002494	chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4	-,-,-,-,-,-,+,-	NDUFC1,NDUFC1,NDUFC1,NDUFC1,NDUFC1,NDUFC1,NAA15,NDUFC1	7547,6206,7547,6206,7547,7547,6467,6230
chr2:176956676-176956897	chr2	+	176956684	176956944	True	NM_001080458,NM_021193,NM_000523	chr2,chr2,chr2	-,+,+	EVX2,HOXD12,HOXD13	-7994,7585,587
chr19:18138483-18139156	chr19	+	18138608	18139212	True	NM_015683,NM_005535	chr19,chr19	+,-	ARRDC2,IL12RB1	-19682,58542
chr11:63951813-63952774	chr11	+	63952259	63952809	True	NM_006819,NM_014067	chr11,chr11	+,-	STIP1,MACROD1	777,-18674
chr12:49761603-49762909	chr12	+	49761663	49762718	True	NM_001008223,NM_023071	chr12,chr12	-,+	C1QL4,SPATS2	-30692,-1035
chr8:134422065-134423195	chr8	+	134422571	134423239	True	NR_037944,NM_006096	chr8,chr8	+,-	WISP1,NDRG1	-219340,-113024
chr3:63110414-63111260	chr3	+	63110550	63111053	True	NM_183394,NR_027104	chr3,chr3	-,+	CADPS,LOC285401	-249486,-22237
chr6:13925838-13927227	chr6	+	13925856	13927228	True	NM_001165034,NM_001031713,NM_152737,NM_001165032,NM_001165033	chr6,chr6,chr6,chr6,chr6	+,-,+,+,+	RNF182,CCDC90A,RNF182,RNF182,RNF182	-1230,-111067,-809,-809,-483
chr2:230788753-230789643	chr2	+	230789102	230789479	True	NM_174899,NM_004238	chr2,chr2	+,-	FBXO36,TRIP12	-1956,-2447
chr9:130215654-130216716	chr9	+	130215739	130216609	True	NM_001005374,NM_001190723,NM_001005373,NM_138361,NR_002449,NM_000976	chr9,chr9,chr9,chr9,chr9,chr9	+,+,+,+,-,-	LRSAM1,LRSAM1,LRSAM1,LRSAM1,SNORA65,RPL12	-1256,-2025,-2025,-2001,-4823,-2028
chr17:78152182-78152464	chr17	+	78152221	78152481	True	NM_052819,NM_024110,NM_014740	chr17,chr17,chr17	+,+,-	CARD14,CARD14,EIF4A3	9117,-8,-31239
chr4:128803835-128805813	chr4	+	128804213	128805497	True	NM_001190801,NM_001190799,NM_152778,NM_014264	chr4,chr4,chr4,chr4	+,+,-,+	PLK4,PLK4,MFSD8,PLK4	-1865,-2248,81706,-2248
chr16:52579707-52579959	chr16	+	52579712	52579820	True	NM_001080430,NM_025134,NM_001146188	chr16,chr16,chr16	-,+,-	TOX3,CHD9,TOX3	1036,509124,1944
chr20:44465097-44465461	chr20	+	44465291	44465461	True	NM_003279,NM_033421,NM_001042632,NM_001042633,NM_152897	chr20,chr20,chr20,chr20,chr20	-,+,+,+,+	TNNC2,SNX21,SNX21,SNX21,SNX21	-9338,-2872,-2872,-2872,-2872
chr6:53194476-53195786	chr6	+	53194667	53195813	True	NM_012347,NM_021814	chr6,chr6	+,-	FBXO9,ELOVL5	-258952,18185
chr13:110960370-110961023	chr13	+	110960486	110961011	True	NM_001845,NM_001846	chr13,chr13	-,+	COL4A1,COL4A2	-990,-906
chr19:7588855-7589873	chr19	+	7589107	7589695	True	NM_018083,NM_080662,NM_020533,NM_001166112,NM_001166113,NM_001166111,NM_006702	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+,+	ZNF358,PEX11G,MCOLN1,PNPLA6,PNPLA6,PNPLA6,PNPLA6	-8154,-35202,-1662,9432,9940,9895,9342
chr3:139391862-139393684	chr3	+	139391890	139393725	True	NM_001200047,NM_178177,NM_022131	chr3,chr3,chr3	-,-,+	NMNAT3,NMNAT3,CLSTN2	3210,3210,260301
chr15:66796915-66797162	chr15	+	66796940	66797144	True	NM_006049,NM_000968,NR_003105,NR_002440,NR_002441,NR_002442,NR_002443,NM_017975	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,+,-,-,-,-,+	SNAPC5,RPL4,ZWILCH,SNORD16,SNORD18A,SNORD18B,SNORD18C,ZWILCH	-6794,90,286,-1692,-1288,-2511,-3284,286
chr16:2906877-2907512	chr16	+	2906937	2907499	True	NM_001142499,NM_022119	chr16,chr16	+,-	FLYWCH2,PRSS22	25696,722
chr4:87947279-87948127	chr4	+	87947545	87948169	True	NM_144645,NM_005935	chr4,chr4	-,+	C4orf36,AFF1	-133970,-19444
chr6:82788780-82790172	chr6	+	82788810	82789191	True	NM_006670,NM_015525	chr6,chr6	+,-	TPBG,IBTK	283731,168312
chr19:10303304-10304420	chr19	+	10303308	10304462	True	NM_001130823,NR_036206,NM_001379	chr19,chr19,chr19	-,+,-	DNMT1,MIR4322,DNMT1	1343,36626,1343
chr3:141452632-141453583	chr3	+	141452837	141453615	True	NM_001201370,NM_183237,NR_037703,NR_037702,NM_001178140,NM_014245	chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,-,+	RNF7,RNF7,RNF7,RNF7,TFDP2,RNF7	3435,3435,3435,3435,265664,3435
chr4:118997983-118999626	chr4	+	118998290	118999634	True	NM_004784,NM_003619	chr4,chr4	+,-	NDST3,PRSS12	-42841,274338
chr20:35374425-35374645	chr20	+	35374429	35374689	True	NM_032013,NM_080628,NM_022477	chr20,chr20,chr20	-,+,-	NDRG3,C20orf118,NDRG3	52,129880,52
chr10:73154793-73155763	chr10	+	73154804	73155728	True	NM_001164375,NM_001171930,NM_001171931,NM_001171932,NM_022124,NM_052836	chr10,chr10,chr10,chr10,chr10,chr10	-,+,+,+,+,+	C10orf105,CDH23,CDH23,CDH23,CDH23,CDH23	323900,962,962,962,962,962
chr17:78389959-78390713	chr17	+	78390106	78390458	True	NM_001164637,NR_029376,NM_001164638,NM_173627	chr17,chr17,chr17,chr17	+,-,+,+	FLJ35220,LOC100294362,FLJ35220,FLJ35220	-1204,-1138,-1204,-1204
chr18:47792615-47792897	chr18	+	47792662	47792870	True	NM_145020,NM_001039535	chr18,chr18	-,+	CCDC11,SKA1	45,108521
chr20:42139850-42140141	chr20	+	42139868	42140160	True	NM_032107,NM_001008901,NM_015478	chr20,chr20,chr20	+,-,+	L3MBTL1,GTSF1L,L3MBTL1	-3603,215532,2915
chr1:201981830-201982040	chr1	+	201981864	201982038	True	NM_012134,NM_004433,NM_001114309	chr1,chr1,chr1	-,+,+	LMOD1,ELF3,ELF3	-66148,-2225,-2225
chr14:70828292-70828513	chr14	+	70828346	70828508	True	NM_001204090,NM_003813,NM_016468	chr14,chr14,chr14	-,+,-	COX16,ADAM21,COX16	-1898,95708,-1898
chr2:239137868-239138354	chr2	+	239137879	239138324	True	NR_026925,NR_026926,NR_026923	chr2,chr2,chr2	-,-,+	LOC151174,LOC151174,LOC643387	2045,2045,2002
chrX:51933000-51933444	chrX	+	51933083	51933477	True	NM_001098800,NM_177537,NM_177535,NM_030801,NR_003712,NR_003711	chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,-,+	MAGED4,MAGED4B,MAGED4B,MAGED4B,SNORA11E,SNORA11D	-5126,-5215,-5215,-5215,417,240
chrX:51933000-51933444	chrX	-	51806809	51807203	False	NM_001098800,NM_177537,NM_177535,NM_030801,NR_003712,NR_003711	chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,+,-	MAGED4,MAGED4B,MAGED4B,MAGED4B,SNORA11E,SNORA11D	5126,5215,5215,5215,-417,-240
chr2:47180-47523	chr2	+	47252	47488	True	NM_001077710,NM_001040649	chr2,chr2	-,+	FAM110C,ACP1	-664,217380
chr16:47153355-47154901	chr16	+	47153381	47154938	True	NM_001142466,NM_001201477	chr16,chr16	+,-	GPT2,NETO2	-234337,23048
chr13:73302452-73304226	chr13	+	73302620	73304043	True	NM_001071775,NM_024808	chr13,chr13	-,+	MZT1,C13orf34	-682,-643
chrY:26356914-26358342	chrY	+	26356931	26358259	True	NR_002195,NR_001526,NR_001555	chrY,chrY,chrY	-,+,-	GOLGA2P3Y,TTTY17A,GOLGA2P2Y	2769,273219,2769
chrY:26356914-26358342	chrY	-	27604176	27605504	False	NR_002179,NR_002195,NR_001555	chrY,chrY,chrY	-,+,+	TTTY17C,GOLGA2P3Y,GOLGA2P2Y	-273256,-2769,-2769
chr10:128214972-128216384	chr10	+	128215256	128216431	True	NM_001004298,NM_001380	chr10,chr10	-,+	C10orf90,DOCK1	-5246,377591
chr17:39601043-39601977	chr17	+	39601183	39601829	True	NM_030975,NM_006771	chr17,chr17	+,-	KRTAP9-9,KRT38	-189598,-3587
chrX:108970239-108971126	chrX	+	108970239	108971056	True	NM_004458,NM_022977,NM_018698	chrX,chrX,chrX	-,-,+	ACSL4,ACSL4,NXT2	5615,5615,-191286
chr17:21114346-21114700	chr17	+	21114368	21114652	True	NM_003876,NM_145109,NR_024547	chr17,chr17,chr17	-,+,-	TMEM11,MAP2K3,TMEM11	3306,73315,3306
chr11:75241073-75241415	chr11	+	75241094	75241462	True	NM_030792,NM_001235	chr11,chr11	-,+	GDPD5,SERPINH1	-4495,31707
chr10:22608635-22609401	chr10	+	22608634	22609384	True	NM_005180,NM_001199938,NM_012071,NM_001204062	chr10,chr10,chr10,chr10	+,-,+,+	BMI1,EBLN1,COMMD3,COMMD3-BMI1	754,-109722,-3381,-3381
chr11:64016281-64017114	chr11	+	64016393	64017127	True	NM_057092,NM_138689,NM_001184883,NM_004470,NM_000932,NM_001135208	chr11,chr11,chr11,chr11,chr11,chr11	+,-,+,+,+,+	FKBP2,PPP1R14B,PLCB3,FKBP2,PLCB3,FKBP2	-6856,-1980,1867,-8031,1867,-7840
chr11:7504819-7505803	chr11	+	7504917	7505841	True	NM_198474,NM_016229	chr11,chr11	+,-	OLFML1,CYB5R2	758,189031
chr6:167371586-167372125	chr6	+	167371605	167371799	True	NM_003730,NM_007045	chr6,chr6	-,+	RNASET2,FGFR1OP	-1528,41016
chr21:45709602-45710049	chr21	+	45709608	45710048	True	NM_002626,NM_175867,NM_000658,NM_000383,NR_024108	chr21,chr21,chr21,chr21,chr21	+,-,+,+,+	PFKL,DNMT3L,AIRE,AIRE,PFKL	9881,-27509,225,-3896,9876
chr17:1084427-1084970	chr17	+	1084676	1084964	True	NM_001164405,NM_021962,NM_001159746	chr17,chr17,chr17	+,-,-	BHLHA9,ABR,ABR	88893,-1545,5702
chr4:159481783-159482030	chr4	+	159481808	159482076	True	NM_001008393,NM_021634	chr4,chr4	-,+	C4orf46,RXFP1	111176,-38812
chr10:134257837-134258419	chr10	+	134257849	134258398	True	NM_173541,NM_173575	chr10,chr10	+,-	C10orf91,STK32C	315,-136372
chr21:45938164-45938801	chr21	+	45938247	45938668	True	NR_026548,NR_026547,NM_198691	chr21,chr21,chr21	+,+,-	C21orf90,C21orf90,KRTAP10-1	-1200,-1200,21461
chr18:74241267-74241510	chr18	+	74241318	74241492	True	NR_015417,NM_014643	chr18,chr18	+,-	LOC284276,ZNF516	-757,-34172
chr22:20795391-20796424	chr22	+	20795505	20796409	True	NM_182895,NM_153334,NR_003253	chr22,chr22,chr22	-,-,+	SCARF2,SCARF2,ZNF74	-3359,-3359,-47076
chr12:69344721-69345536	chr12	+	69344728	69345426	True	NM_001874,NM_002392	chr12,chr12	-,+	CPM,MDM2	11644,-142820
chr22:21905523-21906936	chr22	+	21905705	21906985	True	NM_001128635,NM_003347,NM_001128633	chr22,chr22,chr22	-,+,-	RIMBP3B,UBE2L3,RIMBP3C	-332,14971,45
chr22:21905523-21906936	chr22	+	20461741	20463024	False	NM_015672,NR_026919	chr22,chr22	-,+	RIMBP3,LOC150197	45,-267937
chr22:21905523-21906936	chr22	-	21736437	21737707	False	NM_001128635,NR_003700,NM_001128633	chr22,chr22,chr22	+,-,+	RIMBP3B,PI4KAP2,RIMBP3C	332,134123,-45
chr10:134758225-134758730	chr10	+	134758269	134758705	True	NM_173572,NM_001083909	chr10,chr10	-,+	C10orf93,GPR123	-2180,142703
chr10:75673059-75673435	chr10	+	75673075	75673433	True	NM_002658,NM_001001791,NM_001145031	chr10,chr10,chr10	+,-,+	PLAU,C10orf55,PLAU	-2264,9152,-2264
chr17:7593357-7594951	chr17	+	7593579	7594688	True	NM_001143992,NM_001143991,NM_001143990,NM_018081,NM_000546,NM_001126114,NM_001126112,NM_001126113	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,-,-,-,-	WRAP53,WRAP53,WRAP53,WRAP53,TP53,TP53,TP53,TP53	-1970,-2879,-4248,-1970,-2716,-2716,-2716,-2716
chr7:48131613-48131967	chr7	+	48131635	48131959	True	NM_181597,NM_003364,NM_152782	chr7,chr7,chr7	+,+,-	UPP1,UPP1,SUN3	-3331,-2940,-62919
chr11:102482915-102483625	chr11	+	102483239	102483396	True	NM_001166,NM_004771	chr11,chr11	+,-	BIRC2,MMP20	-265328,12722
chr6:15043879-15044307	chr6	+	15044191	15044358	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	202168,618990
chr1:43017174-43018417	chr1	+	43017173	43018340	True	NM_032257,NM_001080850	chr1,chr1	-,+	ZMYND12,CCDC30	-95235,-16664
chr11:65558675-65558994	chr11	+	65558681	65558821	True	NM_138368,NM_004561	chr11,chr11	-,+	DKFZp761E198,OVOL1	-10859,-4203
chr14:58864220-58864738	chr14	+	58864226	58864732	True	NM_012460,NM_207377	chr14,chr14	-,+	TIMM9,TOMM20L	29550,-1633
chr9:101472111-101472580	chr9	+	101472240	101472538	True	NM_024642,NM_005458	chr9,chr9	+,-	GALNT12,GABBR2	97442,-761
chr1:111147387-111148856	chr1	+	111147395	111148857	True	NM_004974,NR_003599	chr1,chr1	-,+	KCNA2,CYMP	168,-124058
chr3:46620634-46621541	chr3	+	46620702	46621448	True	NM_003212,NM_024512,NM_001174136	chr3,chr3,chr3	+,-,+	TDGF1,LRRC2,TDGF1	-1677,-12691,-4708
chr2:209056011-209056443	chr2	+	209056045	209056296	True	NM_001178000,NM_001099334	chr2,chr2	+,-	PIKFYVE,C2orf80	74694,-1272
chr17:40266115-40266355	chr17	+	40266213	40266341	True	NM_024119,NM_021078,NM_033194	chr17,chr17,chr17	-,-,+	DHX58,KAT2A,HSPB9	-1462,7091,8414
chr1:159871561-159872817	chr1	+	159871731	159872544	True	NM_012337,NM_020125	chr1,chr1	-,+	CCDC19,SLAMF8	-1825,-75303
chr19:18532334-18532687	chr19	+	18532382	18532446	True	NM_032627,NM_001170939,NM_001009998	chr19,chr19,chr19	+,-,+	SSBP4,ISYNA1,SSBP4	-2287,16525,-2287
chr19:56186843-56187086	chr19	+	56186875	56187077	True	NM_001130072,NM_203374,NM_001130071,NM_013333	chr19,chr19,chr19,chr19	+,-,+,+	EPN1,ZNF784,EPN1,EPN1	-365,-50934,913,-365
chr1:145515475-145516050	chr1	+	145515731	145516091	True	NR_002328,NM_003846,NM_001184795,NM_003637,NM_005105	chr1,chr1,chr1,chr1,chr1	-,+,+,+,+	GNRHR2,PEX11B,PEX11B,ITGA10,RBM8A	35,73,468,8898,-8225
chr21:35014310-35014894	chr21	+	35014385	35014887	True	NM_145858,NM_003024,NM_001001132	chr21,chr21,chr21	-,+,+	CRYZL1,ITSN1,ITSN1	-225,-104,-104
chr18:5543929-5545240	chr18	+	5544247	5545208	True	NM_012307,NR_015389	chr18,chr18	-,+	EPB41L3,LOC339290	-261,-306199
chr9:130534948-130535940	chr9	+	130534959	130535771	True	NR_036055,NM_005489,NM_170600	chr9,chr9,chr9	+,-,-	MIR2861,SH2D3C,SH2D3C	12425,-1338,5328
chr19:54664050-54664736	chr19	+	54664051	54664785	True	NM_014516,NM_024316	chr19,chr19	+,-	CNOT3,LENG1	-22666,-605
chr2:62422817-62423081	chr2	+	62422817	62423104	True	NM_006430,NM_006577	chr2,chr2	-,+	CCT4,B3GNT2	-307026,157
chr10:119000854-119001068	chr10	+	119000862	119001054	True	NR_037436,NM_003054	chr10,chr10	-,+	MIR3663,SLC18A2	-73577,-329
chr17:41910706-41910907	chr17	+	41910774	41910892	True	NR_003562,NM_001168324,NM_001932	chr17,chr17,chr17	-,+,-	MPP3,CD300LG,MPP3	-227,13623,-227
chr7:86801935-86802774	chr7	+	86801965	86802445	True	NM_024315,NM_021145	chr7,chr7	-,+	C7orf23,DMTF1	46642,-20148
chrX:140274444-140275652	chrX	+	140274582	140275482	True	NM_145664,NM_012317	chrX,chrX	+,-	SPANXB2,LDOC1	-177879,-3272
chr1:225652396-225652800	chr1	+	225652443	225652815	True	NM_194442,NM_001130440	chr1,chr1	-,+	LBR,SRP9	-35886,312699
chr14:64684394-64685206	chr14	+	64684395	64685145	True	NM_182910,NM_182913,NM_001040275	chr14,chr14,chr14	+,+,-	SYNE2,SYNE2,ESR2	-1781,-3594,76033
chr19:46287336-46288824	chr19	+	46287384	46288727	True	NM_004943,NM_004409,NM_001081563,NM_001081562,NM_001081560,NM_004497	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,+	DMWD,DMPK,DMPK,DMPK,DMPK,FOXA3	7383,-1569,-3523,-1569,-1569,78790
chr19:16683463-16683728	chr19	+	16683465	16683757	True	NM_024881,NM_032207	chr19,chr19	-,+	SLC35E1,C19orf44	-272,-76311
chr1:212583778-212585337	chr1	+	212583881	212585130	True	NM_018252,NM_001198862,NM_013349	chr1,chr1,chr1	-,-,+	TMEM206,TMEM206,NENF	3188,3164,21098
chr5:137516631-137518302	chr5	+	137516849	137518181	True	NM_005733,NM_139199,NM_001164326,NM_006696	chr5,chr5,chr5,chr5	+,-,-,-	KIF20A,BRD8,BRD8,BRD8	-2484,-2491,-2491,-2491
chr14:23777146-23779019	chr14	+	23777190	23778842	True	NM_001199864,NM_001199839,NM_004050,NR_026862	chr14,chr14,chr14,chr14	+,+,+,-	BCL2L2-PABPN1,BCL2L2,BCL2L2,PPP1R3E	-1270,-1172,-1270,-5133
chr1:228268179-228268781	chr1	+	228268191	228268529	True	NM_001024227,NM_001024226,NM_024319,NM_001658,NM_001024228	chr1,chr1,chr1,chr1,chr1	+,+,-,+,+	ARF1,ARF1,C1orf35,ARF1,ARF1	2321,1831,22555,1831,2321
chr1:16479906-16480801	chr1	+	16480010	16480800	True	NM_001165945,NM_004431	chr1,chr1	+,-	CLCNKB,EPHA2	-104777,1832
chr8:23146095-23146334	chr8	+	23146106	23146317	True	NM_001136108,NM_003844	chr8,chr8	+,-	R3HCC1,TNFRSF10A	-545,-63426
chr1:2463634-2464121	chr1	+	2463689	2464143	True	NM_018216,NM_003820,NM_001010926	chr1,chr1,chr1	-,+,-	PANK4,TNFRSF14,HES5	-5654,23661,-2005
chr14:37127493-37127756	chr14	+	37127500	37127704	True	NM_006194,NM_014360	chr14,chr14	+,-	PAX9,NKX2-8	-778,-75714
chr15:45927687-45928124	chr15	+	45927691	45927989	True	NM_021199,NM_013309	chr15,chr15	+,-	SQRDL,SLC30A4	-486,-112689
chr5:609489-609729	chr5	+	609495	609709	True	NM_007030,NM_018140	chr5,chr5	-,+	TPPP,CEP72	83851,2695
chr18:6415027-6415250	chr18	+	6415071	6415291	True	NM_173464,NM_001010000	chr18,chr18	-,+	L3MBTL4,ARHGAP28	-161,419140
chr1:1148852-1149102	chr1	+	1149038	1149130	True	NM_004195,NM_148901,NM_148902,NM_003327,NM_080605	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	TNFRSF18,TNFRSF18,TNFRSF18,TNFRSF4,B3GALT6	-6949,-6949,-6949,468,18498
chr14:20937914-20938644	chr14	+	20937929	20938667	True	NM_144568,NM_000270,NM_001100814	chr14,chr14,chr14	-,+,-	TMEM55B,PNP,TMEM55B	-8292,-442,-8292
chr9:84676597-84677002	chr9	+	84676672	84676796	True	NM_005077,NM_001001670	chr9,chr9	-,+	TLE1,FAM75D1	-373076,-73036
chr12:58003394-58003885	chr12	+	58003398	58003861	True	NM_001111270,NM_182947,NM_001478,NM_178502,NM_133489	chr12,chr12,chr12,chr12,chr12	+,+,-,+,+	ARHGEF25,ARHGEF25,B4GALNT1,DTX3,SLC26A10	101,1356,23174,-4845,9831
chr4:116014553-116016352	chr4	+	116014801	116016401	True	NM_022569,NR_030303	chr4,chr4	-,+	NDST4,MIR577	18681,-436953
chr19:51504746-51505443	chr19	+	51504751	51505481	True	NM_012315,NM_144505,NM_144507,NM_144506,NM_014441,NM_007196	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,+,-	KLK9,KLK8,KLK8,KLK8,SIGLEC9,KLK8	7459,-93,-93,-93,122655,-93
chr10:133747930-133748239	chr10	+	133747932	133748229	True	NM_018461,NM_004052,NR_033191	chr10,chr10,chr10	+,-,+	PPP2R2D,BNIP3,PPP2R2D	-30,47263,-30
chr5:41869874-41870210	chr5	+	41869965	41870193	True	NM_000436,NM_175921	chr5,chr5	-,+	OXCT1,C5orf51	648,34276
chr11:61718298-61719450	chr11	+	61718314	61719406	True	NM_001139443,NM_004183,NM_002032	chr11,chr11,chr11	+,+,-	BEST1,BEST1,FTH1	-1009,-1009,15776
chr7:120629157-120630838	chr7	+	120629201	120630860	True	NM_024913,NM_001105533,NM_012338	chr7,chr7,chr7	+,+,-	C7orf58,C7orf58,TSPAN12	-502,-93,-131024
chr17:41172814-41173209	chr17	+	41172931	41173109	True	NM_006373,NM_005440	chr17,chr17	-,+	VAT1,RND2	1400,4148
chr1:161519562-161520364	chr1	+	161519562	161520352	True	NM_000569,NM_001127593,NM_001127592,NM_001127595,NM_001127596,NM_002155	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,+	FCGR3A,FCGR3A,FCGR3A,FCGR3A,FCGR3A,HSPA6	52,111,52,111,111,-25577
chr1:161519562-161520364	chr1	+	161601657	161601707	False	NR_024151,NM_000570	chr1,chr1	+,-	HSPA7,FCGR3B	-25859,-499
chr3:38389127-38389357	chr3	+	38389183	38389345	True	NM_005108,NR_028389	chr3,chr3	+,-	XYLB,LOC100128640	-983,107016
chr9:130910274-130911451	chr9	+	130910288	130911496	True	NR_027812,NM_005564	chr9,chr9	-,+	PTGES2,LCN2	-19576,235
chr11:104769156-104769541	chr11	+	104769185	104769542	True	NM_001077244,NR_034070,NR_034071,NR_034068,NR_034063,NR_034061,NM_001191016,NR_034067,NR_034066,NR_034065,NR_034064	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,-,-,-,-,-,-,-,-,-,-	GRIA4,CASP12,CASP12,CASP12,CASP12,CASP12,CASP12,CASP12,CASP12,CASP12,CASP12	711257,16,16,16,16,16,16,16,16,16,16
chr1:24036997-24038957	chr1	+	24037166	24038829	True	NM_001199802,NM_001127621	chr1,chr1	+,-	RPL11,GALE	-18951,87288
chrX:70434649-70435198	chrX	+	70434666	70435104	True	NM_000166,NM_001097642,NM_201599	chrX,chrX,chrX	+,+,-	GJB1,GJB1,ZMYM3	7951,-43,38984
chr12:12422120-12422426	chr12	+	12422217	12422429	True	NM_058169,NM_002336	chr12,chr12	+,-	LOH12CR1,LRP6	87590,-2406
chr1:149981775-149982152	chr1	+	149981832	149982109	True	NM_007259,NM_020205	chr1,chr1	+,-	VPS45,OTUD7B	57232,628
chr6:35480151-35480438	chr6	+	35480195	35480486	True	NM_003322,NM_007104	chr6,chr6	-,+	TULP1,RPL10A	211,-44068
chr15:89922855-89923202	chr15	+	89922923	89923199	True	NR_015411,NM_002693	chr15,chr15	+,-	LOC254559,POLG	-1708,-44897
chr4:41216867-41217100	chr4	+	41216892	41217125	True	NM_173075,NM_001166050,NM_004307,NM_004181	chr4,chr4,chr4,chr4	-,-,-,+	APBB2,APBB2,APBB2,UCHL1	-257,-257,-257,41772
chr14:62230002-62230743	chr14	+	62230058	62230524	True	NM_001017970,NM_003082	chr14,chr14	-,+	TMEM30B,SNAPC1	-481528,-1034
chr16:11832700-11833369	chr16	+	11832932	11833248	True	NM_003498,NM_015914	chr16,chr16	+,-	SNN,TXNDC11	-70704,3450
chrX:48661986-48662371	chrX	+	48661989	48662066	True	NM_006044,NM_013271	chrX,chrX	+,-	HDAC6,PCSK1N	-1553,31947
chr14:24559961-24560450	chr14	+	24560122	24560335	True	NM_001018073,NM_006177,NM_004563	chr14,chr14,chr14	+,-,+	PCK2,NRL,PCK2	3147,-6290,3147
chr11:111363725-111365371	chr11	+	111364058	111365341	True	NR_029839,NM_017589	chr11,chr11	+,-	MIR34B,BTG4	18321,17773
chr13:112723553-112724059	chr13	+	112723557	112724060	True	NM_006322,NM_005986	chr13,chr13	-,+	TUBGCP3,SOX1	518478,-1695
chr19:55770867-55771096	chr19	+	55770876	55771062	True	NM_032430,NM_014931	chr19,chr19	+,-	BRSK1,PPP6R1	24471,-838
chr8:99437123-99438656	chr8	+	99437624	99438582	True	NM_024759,NM_020697	chr8,chr8	-,+	NIPAL2,KCNS2	-131003,667
chr19:7561604-7561878	chr19	+	7561706	7561864	True	NM_198534,NM_080662	chr19,chr19	+,-	C19orf45,PEX11G	580,-7801
chr10:104595825-104596136	chr10	+	104595833	104595943	True	NM_000102,NM_001136200	chr10,chr10	-,+	CYP17A1,C10orf32	1397,18023
chr19:56905050-56905678	chr19	+	56905137	56905699	True	NM_001159860,NM_144690,NR_037161,NR_037160,NR_037159,NM_152478	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+	ZNF583,ZNF582,LOC386758,LOC386758,LOC386758,ZNF583	9683,-248,-143,-143,-143,9994
chr2:198381006-198381231	chr2	+	198381022	198381178	True	NM_199482,NM_015387,NM_001100819,NM_199440,NM_001204094	chr2,chr2,chr2,chr2,chr2	+,+,+,-,+	MOBKL3,MOBKL3,MOBKL3,HSPD1,MOBKL3	-778,-306,-306,-16024,-51
chr3:49842260-49842700	chr3	+	49842323	49842653	True	NM_003335,NM_001007540,NM_203370	chr3,chr3,chr3	-,-,+	UBA7,CDHR4,C3orf54	8788,-5069,-1687
chr17:35296276-35296845	chr17	+	35296560	35296822	True	NM_012138,NM_198837,NM_005568	chr17,chr17,chr17	+,-,+	AATF,ACACA,LHX1	9352,359920,-1846
chr1:181056098-181056541	chr1	+	181056137	181056509	True	NM_016545,NM_005819	chr1,chr1	+,-	IER5,STX6	1128,-64091
chrX:129468987-129470596	chrX	+	129469473	129470610	True	NM_022810,NM_003951,NM_178471	chrX,chrX,chrX	+,+,-	SLC25A14,SLC25A14,GPR119	3436,3436,48951
chr19:45252390-45252953	chr19	+	45252417	45252911	True	NM_005178,NR_027754	chr19,chr19	+,-	BCL3,CEACAM22P	-490,-192267
chr8:27096930-27098192	chr8	+	27097130	27098192	True	NM_173174,NM_030795	chr8,chr8	+,-	PTK2B,STMN4	70806,17763
chrX:49054807-49055411	chrX	+	49054917	49055455	True	NM_002668,NM_003179	chrX,chrX	+,-	PLP2,SYP	-26784,1256
chr4:924240-925132	chr4	+	924601	925147	True	NM_005255,NM_032326	chr4,chr4	-,+	GAK,TMEM175	1077,1114
chrX:152486177-152486783	chrX	+	152486368	152486752	True	NM_001080485,NM_004988	chrX,chrX	+,-	ZNF275,MAGEA1	112860,-252
chr17:34208644-34208974	chr17	+	34208956	34209026	True	NM_002985,NM_003487	chr17,chr17	-,+	CCL5,TAF15	-1579,-72519
chr16:21662466-21663930	chr16	+	21662594	21663907	True	NM_144672,NM_005849	chr16,chr16	+,-	OTOA,IGSF6	25927,115
chr12:27175800-27176323	chr12	+	27175936	27176221	True	NM_004264,NM_016551	chr12,chr12	+,-	MED21,TM7SF3	-504,-8597
chrX:119443098-119443340	chrX	+	119443101	119443315	True	NM_001104545,NM_001104544,NM_001142447,NM_017938	chrX,chrX,chrX,chrX	-,-,+,-	FAM70A,FAM70A,ATP1B4,FAM70A	2126,2126,52624,2126
chr12:56862623-56862949	chr12	+	56862644	56862916	True	NM_012064,NM_207344	chr12,chr12	-,+	MIP,SPRYD4	-14209,-394
chr6:14804992-14805214	chr6	+	14805104	14805260	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	441266,858079
chr3:57930137-57931749	chr3	+	57930232	57931385	True	NM_001164317,NM_152678	chr3,chr3	+,-	FLNB,FAM116A	62741,-251416
chr2:114390140-114390351	chr22	-	51216572	51216654	False	NM_001003789,NM_001130919,NM_001130920,NM_001130921,NM_001130922,NM_001130923	chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,-,-	RABL2B,RABL2B,RABL2B,RABL2B,RABL2B,RABL2B	5483,5483,5483,5483,5483,5483
chr2:114390140-114390351	chr2	+	114390188	114390348	True	NM_007082,NR_000029,NM_013412,NR_024529,NR_024528,NR_024530,NR_024531	chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,-,+,-,-,-,-	RABL2A,RPL23AP7,RABL2A,RPL23AP7,RPL23AP7,RPL23AP7,RPL23AP7	-5422,-5473,-5422,-5473,-5473,-5473,-5473
chr15:21364401-21364770	chr15	+	21364638	21364786	True	NR_027411,NR_028506	chr15,chr15	+,-	GOLGA8C,NF1P1	-597023,-230013
chr15:21364401-21364770	chr15	+	20358041	20358189	False	NR_036432,NR_027411	chr15,chr15	-,+	HERC2P3,GOLGA8C	353294,409484
chr21:45551983-45552375	chr21	+	45552045	45552419	True	NM_198155,NM_004649,NM_015259	chr21,chr21,chr21	+,+,-	C21orf33,C21orf33,ICOSLG	1074,1074,108465
chr22:35550003-35550332	chr22	+	35550092	35550357	True	NM_001008494,NM_005368	chr22,chr22	+,-	ISX,MB	-88013,463090
chr1:155247947-155248912	chr1	+	155247986	155248852	True	NM_003993,NM_020897	chr1,chr1	-,+	CLK2,HCN3	-4705,-663
chr1:1148484-1148852	chr1	+	1148508	1148818	True	NM_004195,NM_148901,NM_148902,NM_003327,NM_080605	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	TNFRSF18,TNFRSF18,TNFRSF18,TNFRSF4,B3GALT6	-6419,-6419,-6419,780,18810
chr5:172064438-172064926	chr5	+	172064467	172064849	True	NM_001142651,NM_004417	chr5,chr5	+,-	NEURL1B,DUSP1	3426,133404
chr16:21291623-21292704	chr16	+	21291793	21292013	True	NM_001014444,NR_026675	chr16,chr16	-,+	CRYM,NCRNA00169	22441,20156
chr3:131100128-131100340	chr3	+	131100139	131100379	True	NM_001171905,NR_033268,NM_001171906,NR_002985,NM_152395	chr3,chr3,chr3,chr3,chr3	+,+,+,-,+	NUDT16,NUDT16,NUDT16,SNORA58,NUDT16	135,245,229,97748,229
chr8:42549174-42550192	chr8	+	42549278	42550112	True	NM_001199279,NM_000749	chr8,chr8	-,+	CHRNA6,CHRNB3	73878,2449
chr13:28763423-28764171	chr13	+	28763817	28764023	True	NR_029383,NM_175854	chr13,chr13	-,+	LOC100288730,PAN3	-50506,-51227
chr9:88878354-88880187	chr9	+	88878695	88879209	True	NM_024635,NM_001010907	chr9,chr9	+,-	NAA35,C9orf153	-322689,-4176
chr2:133046241-133046547	chr2	+	133046438	133046548	True	NM_001508,NR_027020	chr2,chr2	+,-	GPR39,ANKRD30BL	127598,-30896
chr11:47236509-47236811	chr11	+	47236526	47236854	True	NM_000107,NM_016223	chr11,chr11	+,-	DDB2,PACSIN3	-84,-28516
chr11:69295018-69295419	chr11	+	69295155	69295461	True	NM_153451,NM_053056	chr11,chr11	-,+	ORAOV1,CCND1	194754,160411
chr9:130952028-130952965	chr9	+	130952160	130952580	True	NM_001005336,NM_001131018,NM_001131017,NM_001131016	chr9,chr9,chr9,chr9	+,-,-,-	DNM1,CIZ1,CIZ1,CIZ1	13082,1338,1338,1338
chr1:205705881-205706641	chr1	+	205705999	205706627	True	NM_022731,NM_181644	chr1,chr1	-,+	NUCKS1,MFSD4	12803,-167938
chr14:78869350-78869599	chr14	+	78869380	78869624	True	NM_004796,NM_012245	chr14,chr14	+,-	NRXN3,SNW1	468,-641883
chr7:120597348-120598456	chr7	+	120597444	120598501	True	NM_198267,NM_019071,NM_012338	chr7,chr7,chr7	+,+,-	ING3,ING3,TSPAN12	-6679,-6679,-99267
chr1:228336422-228336715	chr1	+	228336583	228336671	True	NM_000858,NM_020435,NM_181465,NM_001159390,NM_001159391	chr1,chr1,chr1,chr1,chr1	+,+,-,+,+	GUK1,GJC2,MRPL55,GUK1,GUK1	-8705,881,-39570,-8705,-4230
chr17:34304816-34305547	chr17	+	34304961	34305557	True	NM_004590,NM_032963,NM_032962,NM_002988	chr17,chr17,chr17,chr17	-,-,-,+	CCL16,CCL14,CCL14,CCL18	3016,8257,8257,86085
chr14:30400934-30401768	chr14	+	30401013	30401685	True	NM_017769,NM_002742	chr14,chr14	+,-	G2E3,PRKD1	626643,-4114
chr12:123203358-123203901	chr12	+	123203388	123203817	True	NM_006018,NM_003677	chr12,chr12	-,+	GPR109B,DENR	-1949,33553
chr7:140373045-140373437	chr7	+	140373047	140373459	True	NR_024454,NM_052853	chr7,chr7	-,+	LOC100134713,ADCK2	23468,-145
chrX:10632292-10633689	chrX	+	10632782	10633496	True	NM_001122608,NM_001098624	chrX,chrX	+,-	HCCS,MID1	495909,12333
chr6:136610659-136610871	chr6	+	136610662	136610920	True	NM_001077441,NM_001077440,NM_018945,NM_014739	chr6,chr6,chr6,chr6	-,-,+,-	BCLAF1,BCLAF1,PDE7B,BCLAF1	119,119,-437879,119
chr13:21097214-21098246	chr13	+	21097372	21098118	True	NM_006531,NM_015974	chr13,chr13	+,-	IFT88,CRYL1	43089,1944
chr9:139221344-139221830	chr9	+	139221395	139221709	True	NM_015597,NM_001145638,NR_026964	chr9,chr9,chr9	+,+,-	GPSM1,GPSM1,LOC26102	222,222,120
chr10:28821026-28821320	chr10	+	28821128	28821348	True	NM_016628,NR_033805,NR_024557,NM_100486	chr10,chr10,chr10,chr10	+,-,+,+	WAC,LOC220906,WAC,WAC	1075,-15,78,1075
chr13:49685716-49687604	chr13	+	49685930	49687633	True	NM_014923,NM_030925	chr13,chr13	+,-	FNDC3A,CAB39L	-1535,288152
chr17:61995317-61995858	chr17	+	61995380	61995780	True	NM_001318,NM_022579,NM_022581,NM_000515,NM_022560,NM_022561,NM_022562,NM_022580,NR_002947,NM_022559	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,-,-,-,+,-	CSHL1,CSHL1,CSHL1,GH1,GH1,GH1,GH1,CSHL1,TCAM1P,GH1	-6762,-6762,-6762,468,468,468,468,-6762,-61055,468
chr17:9861067-9863007	chr17	+	9861209	9862935	True	NM_003644,NM_004246	chr17,chr17	-,+	GAS7,GLP2R	-119,-131879
chr16:21252326-21252939	chr16	+	21252397	21252735	True	NM_003460,NM_145865	chr16,chr16	-,+	ZP2,ANKS4B	-29529,-7432
chr16:2262163-2262413	chr16	+	2262167	2262453	True	NM_001199174,NM_001199175,NM_001199173,NM_182563,NM_022372,NM_001042371	chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,-,+,-	MLST8,MLST8,MLST8,C16orf79,MLST8,PGP	-6486,-7040,-7040,-1098,-7040,2419
chr14:56010247-56010491	chr14	+	56010285	56010417	True	NM_004986,NR_027123	chr14,chr14	+,-	KTN1,C14orf33	36507,36443
chr3:112284542-112285927	chr3	+	112284776	112285778	True	NM_022488,NM_017945	chr3,chr3	-,+	ATG3,SLC35A5	-4291,-3939
chr18:30972278-30972680	chr18	+	30972295	30972441	True	NM_030632,NM_001105528	chr18,chr18	+,-	ASXL3,C18orf34	186099,47654
chr9:130518553-130519591	chr9	+	130518598	130519556	True	NM_001142532,NM_001142533,NM_001142531,NM_001142534,NR_036055	chr9,chr9,chr9,chr9,chr9	-,-,-,-,+	SH2D3C,SH2D3C,SH2D3C,SH2D3C,MIR2861	5191,-1015,5213,-1037,28640
chr11:63578908-63579815	chr11	+	63579075	63579617	True	NM_138471,NM_001144936	chr11,chr11	+,-	C11orf84,C11orf95	1305,-42962
chr12:96789689-96791044	chr12	+	96789854	96791058	True	NM_001170464,NM_002595,NM_005230	chr12,chr12,chr12	-,-,+	CDK17,CDK17,ELK3	3366,3366,-201709
chr16:22105388-22106088	chr16	+	22105481	22106003	True	NM_173615,NR_033694	chr16,chr16	+,-	VWA3A,PDZD9	-1669,-93050
chr15:85047642-85048092	chr15	+	85047908	85047980	True	NR_003246,NR_033787	chr15,chr15	-,+	GOLGA6L5,DNM1P41	12148,-2153
chr15:85047642-85048092	chr15	-	84837567	84837639	False	NR_027001,NR_033738	chr15,chr15	-,+	LOC388152,LOC440300	61331,22960
chr15:85047642-85048092	chr15	-	84916489	84916561	False	NR_027001,NR_033738	chr15,chr15	-,+	LOC388152,LOC440300	-17569,-55940
chr15:85047642-85048092	chr15	-	82733701	82733773	False	NR_026811,NM_198181	chr15,chr15	-,+	LOC80154,GOLGA6L9	64600,-11567
chr15:85047642-85048092	chr15	-	83110226	83110298	False	NR_026811,NM_198181	chr15,chr15	-,+	LOC80154,GOLGA6L9	72653,-11567
chr17:78967289-78967569	chr17	+	78967326	78967498	True	NR_026857,NM_024591	chr17,chr17	-,+	FLJ90757,CHMP6	41071,-1736
chr17:21113394-21113871	chr17	+	21113468	21113857	True	NM_003876,NM_145109,NR_024547	chr17,chr17,chr17	-,+,-	TMEM11,MAP2K3,TMEM11	4108,74110,4108
chr11:17565273-17565621	chr11	+	17565280	17565632	True	NM_153676,NM_002478,NM_005709	chr11,chr11,chr11	-,+,-	USH1C,MYOD1,USH1C	381,175477,381
chr17:73448718-73449074	chr17	+	73448884	73448952	True	NM_014738,NM_203506	chr17,chr17	+,-	KIAA0195,GRB2	3711,-47094
chr6:33678193-33679084	chr6	+	33678197	33678820	True	NM_032340,NM_002224	chr6,chr6	-,+	C6orf125,ITPR3	741,-89092
chr4:114683551-114683886	chr4	+	114683782	114683846	True	NM_001221,NM_172115,NM_172129,NM_172127,NM_172114,NM_172128,NR_031641	chr4,chr4,chr4,chr4,chr4,chr4,chr4	-,-,-,-,-,-,+	CAMK2D,CAMK2D,CAMK2D,CAMK2D,CAMK2D,CAMK2D,MIR1243	-699,-699,-699,-699,-699,-699,-655814
chr8:56987898-56988216	chr8	+	56987902	56988030	True	NM_001011667,NM_001146227,NR_002437,NM_001023	chr8,chr8,chr8,chr8	+,-,-,-	CHCHD7,RPS20,SNORD54,RPS20	136284,-762,-1442,-762
chr7:143893555-143894799	chr7	+	143893572	143894739	True	NM_001003702,NM_198495	chr7,chr7	-,+	ARHGEF35,CTAGE4	-781,-13077
chr7:143893555-143894799	chr7	+	143992152	143992892	False	NR_002158,NR_033942,NR_002157	chr7,chr7,chr7	+,-,+	OR2A20P,LOC728377,OR2A9P	3573,-9056,3721
chr7:143893555-143894799	chr7	-	144050456	144051622	False	NM_005435,NM_001080413	chr7,chr7	+,-	ARHGEF5,NOBOX	866,49216
chr7:75507135-75507335	chr7	+	75507314	75507384	True	NM_001040456,NM_001040457,NM_002991	chr7,chr7,chr7	+,+,-	RHBDD2,RHBDD2,CCL24	932,932,-64281
chr19:7461455-7462337	chr19	+	7461665	7461951	True	NR_024491,NM_015318	chr19,chr19	-,+	LOC100128573,ARHGEF18	76347,-1717
chr6:129316675-129317883	chr6	+	129317028	129317349	True	NM_001135648,NM_001079823	chr6,chr6	-,+	PTPRK,LAMA2	-475158,-112798
chr1:154471516-154473041	chr1	+	154471654	154473072	True	NM_001010846,NM_182499,NM_001098475	chr1,chr1,chr1	-,+,+	SHE,TDRD10,TDRD10	1504,1622,1622
chr1:31767711-31769185	chr1	+	31768297	31769191	True	NM_016505,NM_004814	chr1,chr1	+,-	ZCCHC17,SNRNP40	650,503
chr4:77818666-77819046	chr4	+	77818757	77819013	True	NM_018243,NM_001029870	chr4,chr4	+,-	SEPT11,ANKRD56	51881,39
chrX:13741136-13741445	chrX	+	13741259	13741347	True	NM_001011658,NM_003611	chrX,chrX	-,+	TRAPPC2,OFD1	11457,11484
chr19:16832034-16832455	chr19	+	16832037	16832437	True	NM_001007525,NM_024104	chr19,chr19	+,-	NWD1,C19orf42	-1301,-61069
chr6:44264431-44264931	chr6	+	44264552	44264942	True	NM_001137560,NM_182539	chr6,chr6	+,-	TMEM151B,TCTE1	-26123,566
chr18:23723037-23723844	chr18	+	23723236	23723552	True	NM_001025097,NM_001025096,NM_005637,NM_144662	chr18,chr18,chr18,chr18	+,+,-,+	PSMA8,PSMA8,SS18,PSMA8	-9479,-9479,-52625,-9479
chr3:53882651-53883720	chr3	+	53882691	53883769	True	NM_018397,NM_018725	chr3,chr3	-,+	CHDH,IL17RB	-2271,-2165
chr1:85040258-85040855	chr1	+	85040366	85040802	True	NM_004388,NR_036561	chr1,chr1	-,+	CTBS,SPATA1	-203,-68443
chr2:201731481-201732437	chr2	+	201731679	201732362	True	NR_027856,NM_001162407,NR_027855,NM_001136039,NM_004071	chr2,chr2,chr2,chr2,chr2	-,-,-,+,-	CLK1,CLK1,CLK1,NIF3L1,CLK1	-2212,-2395,-2212,21687,-2212
chr1:236771420-236772124	chr1	+	236771419	236771998	True	NM_018072,NM_001103	chr1,chr1	-,+	HEATR1,ACTN2	-3578,77771
chr11:119204950-119205349	chr11	+	119205103	119205191	True	NM_015645,NM_032015	chr11,chr11	-,+	C1QTNF5,RNF26	12242,45
chr1:184929921-184930534	chr1	+	184930092	184930583	True	NM_052966,NM_007212	chr1,chr1	-,+	FAM129A,RNF2	13149,83967
chr12:109459022-109459955	chr12	+	109459021	109459604	True	NM_032663,NM_018711	chr12,chr12	+,-	USP30,SVOP	30775,-176
chr14:104097576-104098451	chr14	+	104097873	104098453	True	NM_005552,NM_182923,NM_001130107,NM_001015048	chr14,chr14,chr14,chr14	+,+,+,-	KLC1,KLC1,KLC1,BAG5	-2408,-2408,-2408,-68722
chr7:22761590-22762565	chr7	+	22761653	22762495	True	NM_000600,NM_019059	chr7,chr7	+,-	IL6,TOMM7	4270,99977
chr6:36826390-36827695	chr6	+	36826462	36827588	True	NM_152734,NM_016059	chr6,chr6	+,-	C6orf89,PPIL1	26051,15262
chr4:4228199-4228456	chr4	+	4228203	4228435	True	NM_145291,NM_177998	chr4,chr4	+,-	ZBTB49,OTOP1	63488,236
chr4:4228199-4228456	chr2	-	91777770	91777844	False	NR_003503,NR_027238	chr2,chr2	+,-	GGT8P,LOC654342	185523,70181
chr1:50590833-50591697	chr1	+	50590999	50591533	True	NM_032785,NM_021952	chr1,chr1	-,+	AGBL4,ELAVL4	-101373,-16456
chr20:55901661-55902783	chr20	+	55901699	55902652	True	NM_198265,NM_012444,NR_036219	chr20,chr20,chr20	+,+,-	SPO11,SPO11,MIR4325	2178,2178,-5052
chr20:44880285-44880955	chr20	+	44880376	44880844	True	NM_152854,NM_021248	chr20,chr20	+,-	CD40,CDH22	-133523,-42
chr3:127348829-127349156	chr3	+	127349039	127349171	True	NM_015720,NM_001142646	chr3,chr3	+,-	PODXL2,TPRA1	-1051,-39471
chr1:64240725-64240969	chr1	+	64240784	64241000	True	NM_001083592,NM_014288,NM_005012	chr1,chr1,chr1	+,-,+	ROR1,ITGB3BP,ROR1	-1145,-251949,-1145
chr9:92220765-92220998	chr9	+	92220767	92220981	True	NM_006705,NM_006378	chr9,chr9	+,-	GADD45G,SEMA4D	-891,-126156
chr8:23348872-23349736	chr8	+	23348872	23349683	True	NM_016612,NM_001128930	chr8,chr8	+,-	SLC25A37,ENTPD4	36679,-33628
chr9:125676060-125676707	chr9	+	125676133	125676359	True	NM_012197,NM_018835,NM_001100588,NM_006626	chr9,chr9,chr9,chr9	+,-,-,-	RABGAP1,RC3H2,RC3H2,ZBTB6	26928,-8571,-8571,-524
chr7:124571523-124573364	chr7	+	124571855	124572710	True	NR_003102,NR_003103,NM_001042594,NR_003104,NM_015450,NM_001174046	chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,+	POT1,POT1,POT1,POT1,POT1,SPAM1	-1818,-1818,-1818,-1818,-1818,-1006011
chr6:114239837-114240911	chr6	+	114240045	114240937	True	NM_001527,NR_027060	chr6,chr6	-,+	HDAC2,FLJ34503	51472,-14545
chr17:42636353-42636574	chr17	+	42636381	42636621	True	NM_001466,NR_036474	chr17,chr17	+,-	FZD2,GPATCH8	-1620,-55424
chr2:178936898-178937423	chr2	+	178936974	178937472	True	NM_016953,NM_152945	chr2,chr2	-,+	PDE11A,RBM45	60,39709
chr10:111968681-111969015	chr10	+	111968698	111969064	True	NM_001008541,NM_005871,NM_130439	chr10,chr10,chr10	+,-,+	MXI1,SMNDC1,MXI1	924,95693,-1386
chr13:24152217-24152898	chr13	+	24152283	24152825	True	NM_148957,NM_001204458,NM_001204459,NM_014363,NM_018647	chr13,chr13,chr13,chr13,chr13	+,+,+,-,+	TNFRSF19,TNFRSF19,TNFRSF19,SACS,TNFRSF19	-7825,673,-7825,-144442,673
chr16:21308636-21310539	chr16	+	21308824	21310379	True	NM_001888,NM_001014444,NR_026675	chr16,chr16,chr16	-,-,+	CRYM,CRYM,NCRNA00169	4076,4076,1790
chr1:167599277-167599490	chr1	+	167599337	167599405	True	NM_052862,NM_003851	chr1,chr1	+,-	RCSD1,CREG1	68,-76281
chr1:156649023-156650260	chr1	+	156649470	156650297	True	NM_021948,NM_006617	chr1,chr1	+,-	BCAN,NES	-37785,-2281
chr7:26331691-26331892	chr7	+	26331769	26331925	True	NM_031243,NM_013322,NM_001199835,NR_037670	chr7,chr7,chr7,chr7	-,+,+,+	HNRNPA2B1,SNX10,SNX10,SNX10	-91356,-305,-305,-305
chr15:75932983-75933386	chr15	+	75933060	75933428	True	NM_153271,NM_018285	chr15,chr15	+,-	SNX33,IMP3	7919,-396
chr2:136636678-136636906	chr2	+	136636844	136636954	True	NM_014607,NM_005915	chr2,chr2	+,-	UBXN4,MCM6	-137706,-2833
chr19:41105571-41105937	chr19	+	41105573	41105971	True	NM_001042544,NM_001042545,NM_004756,NM_003573	chr19,chr19,chr19,chr19	+,+,-,+	LTBP4,LTBP4,NUMBL,LTBP4	-2483,1305,90635,-6552
chr9:39796265-39797889	chr9	+	39796625	39797676	True	NR_003528,NM_001085452	chr9,chr9	-,+	LOC653501,FAM75A1	-332099,87298
chr9:39796265-39797889	chr9	-	43705018	43705069	False	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	-74288,-20185
chr9:39796265-39797889	chr9	+	39267662	39268417	False	NM_033655,NM_001085452	chr9,chr9	-,+	CNTNAP3,FAM75A1	19934,87281
chr20:59828960-59829169	chr20	+	59829001	59829063	True	NM_001794,NR_031658	chr20,chr20	+,-	CDH4,MIR1257	-1493,699705
chr20:38891903-38893712	chr20	+	38892345	38893749	True	NM_003286,NM_005461	chr20,chr20	+,-	TOP1,MAFB	763712,424184
chr4:57690370-57691768	chr4	+	57690477	57691527	True	NM_021114,NM_005612	chr4,chr4	-,+	SPINK2,REST	-2584,82514
chr3:10068569-10068846	chr3	+	10068593	10068891	True	NR_002786,NM_033084,NM_001018115	chr3,chr3,chr3	-,+,+	CIDECP,FANCD2,FANCD2	-773,-544,-544
chr5:124191811-124193030	chr5	+	124191889	124193021	True	NM_004384,NM_020747	chr5,chr5	+,-	CSNK1G3,ZNF608	-1344147,-111084
chr15:57207359-57208293	chr15	+	57207482	57208246	True	NM_003205,NM_207038,NM_207037,NR_015419,NM_207036	chr15,chr15,chr15,chr15,chr15	+,+,+,-,+	TCF12,TCF12,TCF12,LOC145783,TCF12	2586,2586,2586,2501,2586
chr1:207818829-207820430	chr1	+	207818899	207820458	True	NM_175710,NR_029832	chr1,chr1	+,-	CR1L,MIR29C	-492,154876
chr10:71891043-71891448	chr10	+	71891047	71891431	True	NM_032797,NM_001198696,NM_018649	chr10,chr10,chr10	-,-,+	AIFM2,AIFM2,H2AFY2	1309,1309,-78741
chr11:67418560-67418785	chr11	+	67418686	67418826	True	NM_007103,NM_080658	chr11,chr11	+,-	NDUFV1,ACY3	-44421,-556
chr6:25727778-25728174	chr6	+	25727908	25727994	True	NM_170745,NM_170610	chr6,chr6	-,+	HIST1H2AA,HIST1H2BA	-1118,-822
chr16:14926749-14927263	chr16	+	14926772	14927310	True	NR_023387,NM_014287	chr16,chr16	-,+	ABCC6P2,NOMO1	-8213,332
chr16:14926749-14927263	chr16	+	16325607	16326124	False	NM_001171,NM_001079528,NM_001004067	chr16,chr16,chr16	-,-,+	ABCC6,ABCC6,NOMO3	-8279,-8279,264
chr16:14926749-14927263	chr16	-	18573760	18574289	False	NM_001004060,NM_173614,NR_003569	chr16,chr16,chr16	-,-,+	NOMO2,NOMO2,ABCC6P1	-326,-326,8280
chr17:56247927-56249130	chr17	+	56247996	56248811	True	NM_017777,NM_001004707	chr17,chr17	-,+	MKS1,OR4D2	47906,-1030
chr8:82753498-82754073	chr8	+	82753632	82753954	True	NM_022133,NM_152284,NM_152836,NM_152837	chr8,chr8,chr8,chr8	-,+,-,-	SNX16,CHMP4C,SNX16,SNX16	617,-108996,617,617
chr22:50625110-50625541	chr22	+	50625130	50625368	True	NM_025204,NM_020461	chr22,chr22	+,-	TRABD,TUBGCP6	-821,58082
chr1:155165118-155165344	chr1	+	155165120	155165392	True	NM_001204287,NM_001204286,NM_001204285,NM_001204297,NM_001204290,NM_001204291,NM_001204292,NM_001204293,NM_002456,NM_001204296,NR_030281,NM_001204288,NM_001044393,NM_001044392,NM_001044391,NM_001044390,NM_001204289,NM_001018017,NM_001018016,NM_001204295,NM_001204294	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,-,-,-,-,-,+,-,-,-,-,-,-,-,-,-,-	MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MIR92B,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1	-2414,-2414,-2414,-2414,-2414,-2414,-2414,-2414,-2414,-2414,-203,-2414,-2414,-2414,-2414,-2414,-2414,-2414,-2414,-2414,-2414
chr5:300466-300946	chr5	+	300531	300985	True	NM_020731,NM_145265	chr5,chr5	+,-	AHRR,CCDC127	3305,-82234
chr5:300466-300946	chr5	-	1605180	1605636	False	NR_003263,NM_004553	chr5,chr5	-,+	SDHAP3,NDUFS6	-10534,195859
chr7:17364398-17365280	chr7	+	17364781	17365276	True	NM_001621,NM_176813	chr7,chr7	+,-	AHR,AGR3	-26567,-443168
chr22:41809288-41809555	chr22	+	41809441	41809501	True	NM_003216,NM_016272	chr22,chr22	+,-	TEF,TOB2	-31529,33576
chr9:99381581-99381792	chr9	+	99381617	99381835	True	NR_026792,NM_003671,NM_033331	chr9,chr9,chr9	+,-,-	LOC441455,CDC14B,CDC14B	106267,327,327
chr1:153286204-153288184	chr1	+	153286307	153287051	True	NM_052891,NM_002965	chr1,chr1	-,+	PGLYRP3,S100A9	-3113,43278
chr4:9604983-9606299	chr4	+	9605373	9605797	True	NR_031688,NM_001040448	chr4,chr4	-,+	MIR548I2,DEFB131	-47436,-159164
chr15:65120676-65121985	chr15	+	65120759	65121865	True	NM_001195059,NM_025049	chr15,chr15	+,-	PLEKHO2,PIF1	12216,-2921
chr19:2246963-2247163	chr19	+	2246970	2247100	True	NR_036207,NM_144616,NM_000479	chr19,chr19,chr19	+,-,+	MIR4321,JSRP1,AMH	3537,9372,2012
chr3:48262950-48263648	chr3	+	48263052	48263693	True	NM_004345,NM_201567	chr3,chr3	+,-	CAMP,CDC25A	1168,-33251
chr1:94587029-94588742	chr1	+	94587111	94588760	True	NM_000350,NR_030621	chr1,chr1	-,+	ABCA4,MIR760	-406,-274782
chr2:147344562-147344871	chr2	+	147344580	147344919	True	NM_001190882,NR_026904	chr2,chr2	-,+	ORC4,PABPC1P2	1433437,-14
chr14:61116633-61117195	chr14	+	61116688	61117234	True	NM_001177963,NM_005982	chr14,chr14	+,-	MNAT1,SIX1	84224,-533
chr22:24372481-24372879	chr22	+	24372572	24372821	True	NM_001144931,NM_000853	chr22,chr22	+,-	LOC391322,GSTT1	295,11513
chr9:38620956-38621199	chr9	+	38620974	38621240	True	NR_027294,NM_147195	chr9,chr9	+,-	FAM201A,ANKRD18A	-12,-614
chr5:131348429-131349170	chr5	+	131348538	131348992	True	NM_001205247,NM_001205251,NM_001205250,NM_001205248,NM_000588,NM_015256,NM_001009185	chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,+,-,-	ACSL6,ACSL6,ACSL6,ACSL6,IL3,ACSL6,ACSL6	-1183,-931,-777,-931,47354,-1183,-1183
chr2:71059877-71060825	chr2	+	71059879	71060815	True	NM_015717,NM_012476	chr2,chr2	-,+	CD207,VAX2	2188,66904
chr4:8200503-8200738	chr4	+	8200502	8200726	True	NM_001130088,NM_018986	chr4,chr4	-,+	ABLIM2,SH3TC1	-39943,333
chr15:53083123-53083365	chr15	+	53083126	53083374	True	NM_004498,NM_002748	chr15,chr15	-,+	ONECUT1,MAPK6	-917,-771766
chr18:43304348-43305899	chr18	+	43304511	43305824	True	NM_015865,NM_001146037,NM_001146036,NM_020964,NM_001128588	chr18,chr18,chr18,chr18,chr18	+,+,+,-,+	SLC14A1,SLC14A1,SLC14A1,EPG5,SLC14A1	-471,1093,-471,241538,-471
chr1:202972933-202973353	chr1	+	202972964	202973311	True	NR_036557,NM_138391,NM_001079809	chr1,chr1,chr1	-,+,+	LOC401980,TMEM183A,TMEM183B	3139,3222,3224
chr9:117914218-117915366	chr9	+	117914275	117915412	True	NM_017418,NM_002160	chr9,chr9	+,-	DEC1,TNC	-10229,-33789
chr10:30972977-30973196	chr10	+	30972993	30973245	True	NM_183058,NM_005204	chr10,chr10	-,+	LYZL2,MAP3K8	-54346,-250178
chr5:135528975-135529262	chr5	+	135529051	135529201	True	NR_024418,NM_001001419	chr5,chr5	-,+	LOC389332,SMAD5	-200,-60566
chr11:64127457-64129096	chr11	+	64127468	64128944	True	NM_003942,NR_031602,NM_001006944,NM_016404	chr11,chr11,chr11,chr11	+,+,+,-	RPS6KA4,MIR1237,RPS6KA4,TRMT112	-894,7129,-894,-42435
chr11:34380652-34380906	chr11	+	34380784	34380880	True	NM_001752,NM_145804	chr11,chr11	+,-	CAT,ABTB2	79591,-1229
chr8:98788989-98789415	chr8	+	98789012	98789334	True	NR_002581,NM_018407	chr8,chr8	-,+	SNORA72,LAPTM4B	265161,-1254
chr7:27698590-27699714	chr7	+	27698595	27699497	True	NM_152740,NM_001079864	chr7,chr7	-,+	HIBADH,TAX1BP1	3173,80240
chr18:47018751-47019821	chr18	+	47018879	47019859	True	NM_001199341,NM_001199356,NM_001199343,NM_001199342,NM_001199345,NM_001199344,NM_001199340,NM_001035006,NM_001035005,NR_031720,NM_000985,NM_001199355,NR_002571,NR_002572,NR_002573,NM_001199346,NR_003701	chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18	-,-,-,-,-,-,-,-,-,+,-,-,-,-,-,-,-	RPL17,RPL17-C18ORF32,RPL17,RPL17,RPL17,RPL17,RPL17,RPL17,C18orf32,MIR1539,RPL17,RPL17-C18ORF32,SNORD58A,SNORD58B,U58,C18orf32,SNORD58C	-45,-30,-45,-45,-30,-45,-30,-30,-5235,-5187,-30,-925,-1162,-780,-3201,-5235,-3185
chr15:90203147-90205124	chr15	+	90203628	90204887	True	NM_020212,NM_198525	chr15,chr15	+,-	WDR93,KIF7	29140,-4946
chr10:98946735-98947243	chr10	+	98946825	98947277	True	NM_005479,NM_003061	chr10,chr10	+,-	FRAT1,SLIT1	131744,-1142
chr4:55524039-55524331	chr4	+	55524118	55524356	True	NM_002253,NM_000222,NM_001093772	chr4,chr4,chr4	-,+,+	KDR,KIT,KIT	467456,-74,-74
chr18:56939954-56940170	chr18	+	56939962	56940134	True	NM_013435,NM_002091	chr18,chr18	-,+	RAX,GRP	541,-52613
chrX:122868316-122869378	chr12	+	52804579	52804765	False	NM_002284,NM_033033	chr12,chr12	+,-	KRT86,KRT82	-108989,-4403
chrX:122868316-122869378	chrX	+	122868893	122869121	True	NM_001204401,NM_001081550	chrX,chrX	+,-	XIAP,THOC2	124540,-1989
chr15:23126549-23127600	chr3	-	33898464	33898550	True	NM_015097,NR_027867	chr3,chr3	-,+	CLASP2,PDCD6IP	-138616,-28421
chr15:23126549-23127600	chr15	+	23126765	23127560	False	NM_001142275,NR_024074	chr15,chr15	-,+	NIPA1,GOLGA8IP	-39922,127681
chr13:20357715-20358662	chr13	+	20357940	20358668	True	NM_001042414,NM_017520,NR_003272	chr13,chr13,chr13	-,+,-	PSPC1,MPHOSPH8,PSPC1	-857,-150203,-857
chr1:8001511-8002798	chr1	+	8001570	8002846	True	NM_001561,NM_001123377	chr1,chr1	-,+	TNFRSF9,PARK7	429,18867
chr6:125518115-125520095	chr6	+	125518322	125520139	True	NM_016063,NM_001003395	chr6,chr6	-,+	HDDC2,TPD52L1	103196,-42956
chr17:61517662-61518072	chr17	+	61517785	61518119	True	NM_001017917,NM_001017916,NM_000789,NM_001915	chr17,chr17,chr17,chr17	-,-,+,-	CYB561,CYB561,ACE,CYB561	138,5476,36302,5653
chr10:70587430-70587646	chr10	+	70587475	70587543	True	NM_152709,NM_001130159,NM_001130161,NM_001130162,NM_152707,NM_001130160	chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,-,+	STOX1,STOX1,STOX1,STOX1,SLC25A16,STOX1	-232,-232,-232,19,-300195,-232
chr10:70587430-70587646	chr10	+	70587811	70587879	False	NM_152709,NM_001130159,NM_001130161,NM_001130162,NM_152707,NM_001130160	chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,-,+	STOX1,STOX1,STOX1,STOX1,SLC25A16,STOX1	-568,-568,-568,-299,-300531,-568
chr4:188865555-188866976	chr4	+	188865587	188866661	True	NM_173553,NM_174900	chr4,chr4	-,+	TRIML2,ZFP42	159797,50263
chr20:3748583-3748842	chr20	+	3748709	3748891	True	NM_001039140,NM_004358	chr20,chr20	-,+	C20orf27,CDC25B	-257,27509
chr7:27780726-27781384	chr7	+	27780726	27781039	True	NM_006024,NM_152740,NM_001079864	chr7,chr7,chr7	+,-,+	TAX1BP1,HIBADH,TAX1BP1	-1046,-78106,-1046
chr4:153867821-153868225	chr4	+	153867865	153868099	True	NM_033393,NM_145720	chr4,chr4	+,-	FHDC1,TIGD4	-3781,-166949
chr2:37571399-37571685	chr2	+	37571414	37571665	True	NM_012413,NM_005813	chr2,chr2	+,-	QPCT,PRKD3	87,-27192
chr19:50191505-50191786	chr19	+	50191624	50191834	True	NM_001101340,NM_001136052,NM_001571,NM_152359,NM_001199752,NM_001199753	chr19,chr19,chr19,chr19,chr19,chr19	+,+,-,+,+,+	C19orf76,CPT1C,IRF3,CPT1C,CPT1C,CPT1C	107,2530,-22492,2530,2530,2530
chr9:133814267-133814486	chr9	+	133814305	133814467	True	NM_001145106,NM_032843,NM_006059	chr9,chr9,chr9	-,-,+	FIBCD1,FIBCD1,LAMC3	38,-66,70036
chrX:2750734-2752068	chrY	-	14528370	14528422	True	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	245875,5019
chr4:3958098-3960032	chr4	+	3958532	3959527	True	NM_000683,NR_024253	chr4,chr4	+,-	ADRA2C,LOC348926	-190287,-1384
chr14:74004215-74004471	chr14	+	74004258	74004442	True	NM_203309,NM_001037161	chr14,chr14	-,+	HEATR4,ACOT1	21259,-381
chr14:74004215-74004471	chr14	+	74036397	74036447	False	NM_203309,NM_006821	chr14,chr14	-,+	HEATR4,ACOT2	-10746,-676
chr17:5031880-5032327	chr17	+	5032077	5032371	True	NM_014519,NM_004505	chr17,chr17	-,+	ZNF232,USP6	-5680,-441
chr22:31895271-31896009	chr22	+	31895554	31896044	True	NM_014775,NM_001007467,NM_001164502,NM_019843	chr22,chr22,chr22,chr22	+,+,-,-	SFI1,SFI1,EIF4ENIF1,EIF4ENIF1	-3353,-3353,-9680,-9680
chr17:29152709-29152966	chr17	+	29152879	29153010	True	NM_015986,NM_024857	chr17,chr17	-,+	CRLF3,ATAD5	-1101,6012
chr10:74859490-74859772	chr10	+	74859659	74859784	True	NM_001142595,NM_001017962,NM_001142596,NM_000917,NM_015901	chr10,chr10,chr10,chr10,chr10	-,-,-,-,+	P4HA1,P4HA1,P4HA1,P4HA1,NUDT13	-2927,-2927,-2927,-2927,10425
chr9:140140296-140140814	chr9	+	140140369	140140697	True	NM_001004353,NM_006088,NM_001001710,NM_015456	chr9,chr9,chr9,chr9	+,+,-,+	C9orf173,TUBB2C,FAM166A,COBRA1	5032,-4709,1575,9061
chr19:47351345-47352128	chr19	+	47351653	47351973	True	NM_021575,NM_004069,NM_004491	chr19,chr19,chr19	-,-,+	AP2S1,AP2S1,GRLF1	2280,2280,69959
chr3:133608369-133609303	chr3	+	133608716	133609171	True	NM_021203,NM_016577	chr3,chr3	+,-	SRPRB,RAB6B	-105891,5571
chr16:70833053-70833427	chr16	+	70833130	70833432	True	NR_034083,NM_018052	chr16,chr16	+,-	LOC100130894,VAC14	-44219,1679
chr16:30347120-30347331	chr16	+	30347130	30347338	True	NR_002453,NM_013292	chr16,chr16	-,+	LOC595101,MYLPF	-435,38784
chr10:118766679-118768344	chr10	+	118766710	118767949	True	NM_018330,NM_181840,NM_001127211	chr10,chr10,chr10	-,+,-	KIAA1598,KCNK18,KIAA1598	-1622,189050,-1622
chr3:13691923-13692200	chr3	+	13691927	13692221	True	NM_004625,NR_027103	chr3,chr3	-,+	WNT7A,LOC285375	229447,-1
chr20:44078991-44079222	chr20	+	44078998	44079260	True	NM_006103,NM_006652	chr20,chr20	+,-	WFDC2,SPINT3	19133,65054
chr17:33288361-33288605	chr17	+	33288384	33288574	True	NM_052857,NM_006584,NM_001193530,NM_001193529	chr17,chr17,chr17,chr17	+,-,-,-	ZNF830,CCT6B,CCT6B,CCT6B	8,4,4,4
chr12:56512393-56512910	chr12	+	56512422	56512796	True	NM_001130420,NM_021104,NM_001184796,NM_015292,NM_032786,NM_001035267	chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,+,+,+	SMARCC2,RPL41,ESYT1,ESYT1,ZC3H10,RPL41	70605,-2099,9189,9189,-443,-2099
chr20:34028030-34029352	chr20	+	34028156	34029072	True	NM_007186,NM_000557	chr20,chr20	+,-	CEP250,GDF5	14150,-2129
chr8:66667549-66668984	chr8	+	66667736	66668989	True	NM_002603,NM_001145838	chr8,chr8	-,+	PDE7A,MTFR1	32384,-85687
chr10:75680776-75681272	chr10	+	75680856	75681185	True	NM_002658,NM_001001791	chr10,chr10	+,-	PLAU,C10orf55	-10050,1407
chr19:5839223-5839600	chr19	+	5839226	5839616	True	NM_001040701,NM_000150,NM_004558	chr19,chr19,chr19	-,-,+	FUT6,FUT6,NRTN	176,176,-15459
chr20:25669695-25671524	chr20	+	25670077	25671545	True	NM_021067,NM_015655	chr20,chr20	+,-	GINS1,ZNF337	-281817,5974
chr10:97410812-97412208	chr10	+	97411057	97412096	True	NM_001098175,NM_001017423,NM_002860	chr10,chr10,chr10	+,-,-	ENTPD1,ALDH18A1,ALDH18A1	59439,4524,4524
chrX:70337356-70338107	chrX	+	70337620	70338152	True	NM_000206,NM_005120	chrX,chrX	-,+	IL2RG,MED12	-6139,253
chr18:55289229-55289584	chr18	+	55289235	55289445	True	NM_004852,NM_004539	chr18,chr18	+,-	ONECUT2,NARS	-186369,-58
chr5:92920322-92920561	chr5	+	92920442	92920594	True	NR_021490,NR_021491,NM_005654	chr5,chr5,chr5	-,-,+	FLJ42709,FLJ42709,NR2F1	-3439,-3489,-1450
chr5:137209145-137209875	chr5	+	137209277	137209874	True	NM_001135940,NM_006805,NM_006790	chr5,chr5,chr5	+,-,+	MYOT,HNRNPA0,MYOT	-5792,-119238,-5792
chr2:24232787-24233008	chr2	+	24232803	24232967	True	NM_001080473,NM_001142319	chr2,chr2	+,-	MFSD2B,C2orf44	-15,37379
chr17:5363917-5364653	chr17	+	5364117	5364471	True	NM_001199699,NM_020162,NM_024039	chr17,chr17,chr17	-,-,+	DHX33,DHX33,MIS12	7959,7959,25775
chr9:126118102-126118563	chr9	+	126118139	126118551	True	NM_173689,NR_030332	chr9,chr9	+,-	CRB2,MIR601	-104,46381
chr6:36810172-36810776	chr6	+	36810545	36810682	True	NM_020939,NM_152734	chr6,chr6	-,+	CPNE5,C6orf89	-3325,42957
chr1:149784750-149785077	chr1	+	149784763	149785101	True	NM_001024599,NM_001161334,NM_001123375,NM_001034077	chr1,chr1,chr1,chr1	-,-,-,+	HIST2H2BF,HIST2H2BF,HIST2H3D,HIST2H4B	-835,-835,185,19119
chr1:149784750-149785077	chr1	+	149400069	149400221	False	NR_027484,NM_001024599	chr1,chr1	+,-	FCGR1C,HIST2H2BF	-30834,-840
chr1:149784750-149785077	chr1	-	120904808	120905050	False	NR_027337,NM_001004340	chr1,chr1	+,-	HIST2H2BA,FCGR1B	983,30944
chr9:140511857-140512369	chr9	+	140511879	140512411	True	NM_024757,NM_001145527	chr9,chr9	+,+	EHMT1,EHMT1	1032,1032
chr17:10262938-10263252	chr17	+	10263162	10263264	True	NM_003802,NM_020233	chr17,chr17	-,+	MYH13,C17orf48	13108,337662
chr2:85580625-85581035	chr2	+	85580674	85581076	True	NM_001135022,NM_001135023,NM_001135021,NM_032213,NM_017750	chr2,chr2,chr2,chr2,chr2	+,+,+,+,-	ELMOD3,ELMOD3,ELMOD3,ELMOD3,RETSAT	766,766,766,766,795
chr8:100905298-100905517	chr8	+	100905369	100905491	True	NM_004374,NM_005034	chr8,chr8	-,+	COX6C,POLR2K	801,257347
chr2:164590063-164591728	chr2	+	164590256	164591582	True	NM_012198,NM_018086	chr2,chr2	+,-	GCA,FIGN	-1389724,981
chr14:23588361-23589276	chr14	+	23588590	23589176	True	NM_001805,NM_017924	chr14,chr14	-,+	CEBPE,C14orf119	-116,-23853
chr7:6677845-6678285	chr7	+	6678091	6678273	True	NM_017560,NM_006956	chr7,chr7	+,-	ZNF853,ZNF12	-22615,68343
chr8:8022907-8023206	chr8	+	8022952	8023226	True	NR_031689,NR_024362	chr8,chr8	-,+	MIR548I3,FLJ10661	-76341,62865
chr8:8022907-8023206	chr8	-	12357470	12357744	False	NR_026789,NM_001137610	chr8,chr8	+,-	FAM66A,FAM86B2	-138003,-63618
chr5:10605281-10605731	chr5	+	10605320	10605583	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-40936,155857
chr12:112030509-112030988	chr12	+	112030608	112030867	True	NM_001136538,NM_002973	chr12,chr12	+,-	ACAD10,ATXN2	92989,6669
chr22:45900530-45901146	chr22	+	45900557	45901131	True	NM_001996,NM_006485,NM_006487,NM_006486,NM_148674	chr22,chr22,chr22,chr22,chr22	+,+,+,+,-	FBLN1,FBLN1,FBLN1,FBLN1,SMC1B	-1890,-1890,-1890,-1890,-91057
chr7:1182022-1182574	chr7	+	1182022	1182247	True	NM_001134396,NM_001134395,NM_032350,NM_001098201	chr7,chr7,chr7,chr7	-,-,-,+	C7orf50,C7orf50,C7orf50,GPER	-4129,-4129,-4129,-54357
chr11:2891419-2891700	chr11	+	2891439	2891733	True	NR_024627,NM_000076	chr11,chr11	+,-	KCNQ1DN,CDKN1C	-227,15312
chr1:205180709-205180931	chr1	+	205180778	205180968	True	NM_014858,NM_015375,NM_199462	chr1,chr1,chr1	+,-,-	TMCC2,DSTYK,DSTYK	16069,-51,-51
chr22:18894574-18896458	chr22	+	18894578	18896293	True	NM_001195226,NM_005675	chr22,chr22	-,+	PRODH,DGCR6	27721,-893
chr7:134473620-134474062	chr7	+	134473821	134474099	True	NM_001628,NM_033138,NM_004342,NM_033157	chr7,chr7,chr7,chr7	-,+,+,+	AKR1B1,CALD1,CALD1,CALD1	-329933,-9721,-9721,-9721
chr4:83821313-83821524	chr4	+	83821354	83821572	True	NM_001077208,NM_024672,NM_014933,NM_016211,NM_001191049,NM_001077207,NM_001077206,NR_034075,NR_034076,NR_034077	chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4	-,+,-,-,-,-,-,-,-,-	SEC31A,THAP9,SEC31A,SEC31A,SEC31A,SEC31A,SEC31A,LOC100499177,LOC100499177,LOC100499177	-8942,264,-8935,-8942,-9019,-8942,-8942,547,547,547
chr3:88037233-88038016	chr3	+	88037298	88038058	True	NM_001008390,NM_000866	chr3,chr3	-,+	CGGBP1,HTR1F	70142,-5623
chr5:175086105-175086619	chr5	+	175086190	175086646	True	NM_001131055,NM_000794	chr5,chr5	+,-	HRH2,DRD1	-1201,-215027
chr3:161089391-161089672	chr3	+	161089398	161089606	True	NM_001080440,NM_001040100	chr3,chr3	+,-	OTOL1,C3orf57	124989,315
chr20:18269145-18269598	chr20	+	18269268	18269598	True	NM_003434,NM_001083330,NM_001099407	chr20,chr20,chr20	+,+,-	ZNF133,ZNF133,C20orf12	-198,-198,178281
chr3:52271959-52272357	chr3	+	52272038	52272378	True	NM_001122870,NM_007284,NM_144641	chr3,chr3,chr3	+,-,+	PPM1M,TWF2,PPM1M	7807,855,7430
chr2:219526361-219526572	chr2	+	219526391	219526589	True	NM_001105537,NM_004328,NM_001079866	chr2,chr2,chr2	-,+,+	ZNF142,BCS1L,BCS1L	-2130,-2063,-2063
chr1:156263087-156263291	chr1	+	156263094	156263340	True	NM_144580,NM_032323,NM_001004319	chr1,chr1,chr1	-,+,-	C1orf85,TMEM79,VHLL	2159,-9075,6138
chr14:91517070-91517642	chr14	+	91517187	91517301	True	NM_182398,NM_004755,NM_001102366	chr14,chr14,chr14	-,-,+	RPS6KA5,RPS6KA5,C14orf159	9746,9746,63055
chr11:47664862-47666680	chr11	+	47665038	47666552	True	NM_014342,NM_001164379	chr11,chr11	-,+	MTCH2,FAM180B	-832,-56859
chr18:5888336-5890291	chr18	+	5888393	5890164	True	NM_001080209,NR_015389	chr18,chr18	-,+	TMEM200C,LOC339290	1989,-650355
chr3:52320222-52321030	chr3	+	52320828	52321026	True	NM_001144951,NR_029677,NM_025222,NR_026701,NR_026700,NR_026702,NM_145262,NR_026699	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,-,-,+,+,+,+,+	GLYCTK,MIR135A1,WDR82,GLYCTK,GLYCTK,GLYCTK,GLYCTK,GLYCTK	809,7348,-8169,809,809,809,809,809
chr1:171810920-171811260	chr1	+	171810924	171811230	True	NR_033704,NM_001136127,NM_015569	chr1,chr1,chr1	-,+,+	VAMP4,DNM3,DNM3	-99545,-354,-354
chr15:43987459-43988426	chr15	+	43987466	43988348	True	NM_001015001,NM_172097	chr15,chr15	+,-	CKMT1A,CATSPER2	-2434,-46427
chr15:43987459-43988426	chr15	+	43887634	43888516	False	NM_001190214,NM_001130858,NM_001130859,NM_020990	chr15,chr15,chr15,chr15	-,-,-,+	PPIP5K1,PPIP5K1,PPIP5K1,CKMT1B	-5183,-5183,-5183,-2434
chr1:2464635-2465900	chr1	+	2464777	2465717	True	NM_018216,NM_003820,NM_001010926	chr1,chr1,chr1	-,+,-	PANK4,TNFRSF14,HES5	-6742,22087,-3093
chr17:41561769-41562050	chr17	+	41561848	41562023	True	NM_001986,NM_004941	chr17,chr17	-,+	ETV4,DHX8	61339,-565
chr7:98475001-98475491	chr7	+	98475041	98475475	True	NR_037403,NM_001134450,NM_001134451,NM_152913,NM_003496	chr7,chr7,chr7,chr7,chr7	+,-,-,-,+	MIR3609,TMEM130,TMEM130,TMEM130,TRRAP	3797,-7368,-7368,-7368,637
chr11:10477895-10478818	chr11	+	10478038	10478870	True	NM_001025390,NM_001025389,NM_000480,NM_001172430,NM_001172431,NM_001190702	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,-	AMPD3,AMPD3,AMPD3,AMPD3,AMPD3,MTRNR2L8	-609,-1424,-5866,3807,-6222,51909
chr10:50887260-50887614	chr10	+	50887431	50887601	True	NM_182554,NM_001042427,NM_001143996	chr10,chr10,chr10	+,+,-	C10orf53,C10orf53,OGDHL	82,82,82874
chr19:3179427-3179770	chr19	+	3179508	3179782	True	NM_003775,NM_198969,NM_020170	chr19,chr19,chr19	+,-,+	S1PR4,AES,NCLN	-823,-116544,6092
chr7:102935791-102936245	chr7	+	102935889	102936247	True	NR_027768,NM_004279	chr7,chr7	-,+	DPY19L2P2,PMPCB	-14976,1625
chr13:33763058-33763945	chr13	+	33763129	33763982	True	NM_004795,NM_178007	chr13,chr13	+,-	KL,STARD13	-172623,-2913
chr18:12421303-12421979	chr18	+	12421407	12421876	True	NM_006796,NM_006553	chr18,chr18	-,+	AFG3L2,SLMO1	-44132,-13578
chr10:81895470-81895926	chr10	+	81895506	81895866	True	NM_001012973,NR_027432	chr10,chr10	+,-	PLAC9,LOC219347	-3305,-56557
chr18:55398874-55399953	chr18	+	55398958	55399144	True	NM_005603,NM_004852	chr18,chr18	-,+	ATP8B1,ONECUT2	71233,-296092
chr2:65357750-65358234	chr2	+	65357756	65358268	True	NM_004161,NM_015147,NM_015543	chr2,chr2,chr2	-,+,-	RAB1A,CEP68,RAB1A	-321,-74312,-321
chr6:86156947-86157761	chr6	+	86157105	86157749	True	NM_001204813,NM_002526,NM_020468	chr6,chr6,chr6	+,+,-	NT5E,NT5E,SNX14	1552,1552,145940
chr11:107328612-107328841	chr11	+	107328653	107328891	True	NM_001130037,NM_152434	chr11,chr11	+,-	ELMOD1,CWF19L2	132925,-81
chr4:54429296-54430898	chr4	+	54429460	54430760	True	NM_032622,NM_030917	chr4,chr4	-,+	LNX1,FIP1L1	-5024,-185692
chr17:30590570-30591466	chr17	+	30590758	30591484	True	NM_022344,NM_138328	chr17,chr17	-,+	C17orf75,RHBDL3	77755,1710
chr6:167374103-167375552	chr6	+	167374208	167375181	True	NM_003730,NM_007045	chr6,chr6	-,+	RNASET2,FGFR1OP	-4131,37634
chr17:4613537-4613837	chr17	+	4613789	4613855	True	NM_004313,NM_199004,NM_014389	chr17,chr17,chr17	+,+,-	ARRB2,ARRB2,PELP1	-51,-51,-6157
chr7:128832921-128833319	chr7	+	128832926	128833277	True	NM_005631,NR_034053	chr7,chr7	+,-	SMO,TNPO3	-4264,-137699
chr22:51178087-51178317	chr22	+	51178091	51178285	True	NM_001003789,NM_001097	chr22,chr22	-,+	RABL2B,ACR	43852,-1490
chr3:148577716-148578049	chr3	+	148577741	148578075	True	NM_001870,NM_003071	chr3,chr3	+,-	CPA3,HLTF	4967,226316
chr3:183269055-183270360	chr3	+	183269078	183270212	True	NM_130446,NM_017644	chr3,chr3	-,+	KLHL6,KLHL24	3338,83198
chr22:18956813-18957227	chr22	+	18956912	18957226	True	NR_002733,NM_016335	chr22,chr22	+,-	DGCR5,PRODH	800,-32846
chr20:44463673-44464856	chr20	+	44463704	44464845	True	NM_003279,NM_033421,NM_001042632,NM_001042633,NM_152897	chr20,chr20,chr20,chr20,chr20	-,+,+,+,+	TNNC2,SNX21,SNX21,SNX21,SNX21	-7751,-1285,-1285,-1285,-1285
chr10:99333477-99335386	chr10	+	99333542	99335146	True	NM_001134670,NM_138413,NM_178832,NM_001129981,NM_020349	chr10,chr10,chr10,chr10,chr10	+,+,-,+,+	HOGA1,HOGA1,MORN4,ANKRD2,ANKRD2	8955,8955,58248,-1337,-1337
chr12:50345501-50345753	chr12	+	50345500	50345790	True	NM_000486,NM_001651,NR_026948	chr12,chr12,chr12	+,+,-	AQP2,AQP5,LOC283332	-1027,9488,-39854
chr1:109656469-109656873	chr1	+	109656580	109656818	True	NM_020775,NM_001122961	chr1,chr1	+,-	KIAA1324,C1orf194	-46,-101
chrX:57147776-57148040	chrX	+	57147805	57147981	True	NM_001006683,NM_001006682,NM_001006681,NM_174912	chrX,chrX,chrX,chrX	-,-,-,+	SPIN2B,SPIN2B,SPIN2B,FAAH2	48,48,48,165128
chr16:88492757-88492985	chr16	+	88492836	88492984	True	NM_000101,NM_001127464	chr16,chr16	-,+	CYBA,ZNF469	224523,894
chr5:158526382-158526859	chr5	+	158526394	158526658	True	NM_024007,NM_145049	chr5,chr5	-,+	EBF1,UBLCP1	180,163430
chr16:31227617-31227928	chr16	+	31227772	31227844	True	NM_001008274,NM_152901	chr16,chr16	+,-	TRIM72,PYDC1	-2481,601
chr19:11546579-11546837	chr19	+	11546615	11546881	True	NM_001001329,NM_145045,NM_002743	chr19,chr19,chr19	+,-,+	PRKCSH,CCDC151,PRKCSH	-397,-635,-397
chr3:79071105-79073012	chr3	+	79071108	79072642	True	NM_001128929,NM_001145845,NM_133631	chr3,chr3,chr3	+,-,-	ROBO2,ROBO1,ROBO1	-1923997,-2499,-2499
chr14:74551058-74551703	chr14	+	74551201	74551720	True	NM_005589,NM_001024674	chr14,chr14	-,+	ALDH6A1,LIN52	-5,-13
chr3:120374203-120375557	chr3	+	120374260	120375050	True	NM_004547,NM_000187	chr3,chr3	+,-	NDUFB4,HGD	-59184,26418
chr19:29401043-29401815	chr19	+	29401070	29401746	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	54291,302447
chr20:18448301-18448811	chr20	+	18448561	18448653	True	NR_036160,NM_006466,NM_001099407	chr20,chr20,chr20	+,+,-	MIR3192,POLR3F,C20orf12	2605,-579,-732
chr2:73425974-73426474	chr2	+	73426023	73426419	True	NM_032319,NM_001134462	chr2,chr2	-,+	C2orf7,NOTO	33987,2966
chr11:89210627-89212498	chr11	+	89210754	89212531	True	NM_001143836,NM_153696	chr11,chr11	-,+	NOX4,FOLH1B	12172,179933
chr16:21441003-21442026	chr16	+	21441513	21441735	True	NR_024456,NR_026675,NM_130464	chr16,chr16,chr16	-,+,-	LOC100190986,NCRNA00169,NPIPL3	4091,-129403,-4855
chr16:21441003-21442026	chr16	+	21873791	21874013	False	NM_003366,NR_003370	chr16,chr16	+,-	UQCRC2,RRN3P1	90595,-43296
chr16:21441003-21442026	chr16	-	22519810	22520032	False	NM_001135865,NR_027460	chr16,chr16	+,-	LOC100132247,RRN3P3	4811,-70774
chr16:21441003-21442026	chr16	+	29521998	29522220	False	NR_002557,NM_177552	chr16,chr16	-,+	LOC613038,SULT1A3	-43099,-50851
chr16:21441003-21442026	chr16	+	30261980	30262202	False	NR_002555,NM_177552	chr16,chr16	-,+	LOC613037,SULT1A3	-5048,-51491
chr17:33913093-33914178	chr17	+	33913611	33914168	True	NM_001282,NM_001030006,NM_000286	chr17,chr17,chr17	+,+,-	AP2B1,AP2B1,PEX12	113,113,-7955
chr12:48519326-48520070	chr12	+	48519550	48520074	True	NM_000289,NM_001166688,NM_014554,NM_001166687	chr12,chr12,chr12,chr12	+,+,-,+	PFKM,PFKM,SENP1,PFKM	-6594,-3177,-19909,-3177
chr19:40971548-40971947	chr19	+	40971559	40971933	True	NM_000713,NM_020971	chr19,chr19	-,+	BLVRB,SPTBN4	-70,1192
chr10:12392252-12392476	chr10	+	12392276	12392410	True	NM_014142,NM_153498,NM_020397	chr10,chr10,chr10	-,+,+	NUDT5,CAMK1D,CAMK1D	-154133,-744,-744
chr19:10762874-10763699	chr19	+	10762890	10762975	True	NM_017620,NM_012218,NM_153464,NM_001137673,NR_024333,NM_004516	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,-,+	ILF3,ILF3,ILF3,ILF3,LOC147727,ILF3	1961,1961,1961,1961,1630,1961
chr10:88782900-88784874	chr10	+	88783029	88784523	True	NM_024756,NM_001146157	chr10,chr10	-,+	MMRN2,FAM25A	-65604,-3049
chrX:153093792-153094037	chrX	+	153093796	153093874	True	NM_032512,NM_006280	chrX,chrX	-,+	PDZD4,SSR4	2179,-33829
chr22:45095029-45095270	chr22	+	45095029	45095319	True	NM_181333,NM_181334,NM_032287	chr22,chr22,chr22	+,+,-	PRR5,PRR5-ARHGAP8,LDOC1L	2758,3062,-201024
chr7:74070781-74071217	chr7	+	74070830	74071235	True	NM_173537,NM_001518,NM_033001,NM_033000,NM_001163636,NM_032999	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,+,+	GTF2IRD2,GTF2I,GTF2I,GTF2I,GTF2I,GTF2I	196659,794,794,794,794,794
chr1:22380799-22381605	chr1	+	22380991	22381231	True	NM_001039802,NM_030761,NM_044472,NM_001791	chr1,chr1,chr1,chr1	+,-,+,+	CDC42,WNT4,CDC42,CDC42	-1935,88340,-1935,-1935
chr1:156573131-156574372	chr1	+	156573368	156574428	True	NM_144772,NM_182679,NM_015590	chr1,chr1,chr1	+,-,-	APOA1BP,GPATCH4,GPATCH4	-11862,-2089,-2089
chrX:129241625-129242037	chrX	+	129241646	129241900	True	NM_001127197,NM_001421,NM_004794	chrX,chrX,chrX	-,-,+	ELF4,ELF4,RAB33A	2838,2625,63872
chr11:67030006-67030354	chr11	+	67030028	67030328	True	NM_001619,NM_021173	chr11,chr11	+,-	ADRBK1,POLD4	3576,90774
chr3:43698896-43700002	chr3	+	43698964	43699857	True	NM_001204834,NM_016006	chr3,chr3	-,+	ANO10,ABHD5	-35404,32517
chr2:128293418-128293923	chr2	+	128293497	128293939	True	NM_017969,NM_001080527	chr2,chr2	-,+	IWS1,MYO7B	-9410,-170
chr3:128295132-128295762	chr3	+	128295218	128295640	True	NM_007354,NR_026954	chr3,chr3	-,+	C3orf27,LOC90246	-289,-68591
chr22:31364745-31365002	chr22	+	31364777	31364951	True	NM_014941,NR_002323	chr22,chr22	-,+	MORC2,TUG1	-590,682
chr5:72247087-72247462	chr5	+	72247286	72247492	True	NM_001146032,NM_138782,NM_152625	chr5,chr5,chr5	+,+,-	FCHO2,FCHO2,ZNF366	4315,4315,-444037
chr9:114288223-114288700	chr9	+	114288308	114288676	True	NM_001007169,NM_001080398,NM_133464	chr9,chr9,chr9	+,-,+	ZNF483,KIAA0368,ZNF483	-912,-41283,-912
chr8:120629908-120630481	chr8	+	120630232	120630480	True	NM_002514,NM_001040092	chr8,chr8	+,-	NOV,ENPP2	-201737,20676
chr1:16400295-16401750	chr1	+	16400370	16401090	True	NM_182623,NM_001165945	chr1,chr1	-,+	FAM131C,CLCNKB	-243,-25137
chr4:186732151-186733629	chr4	+	186732201	186733605	True	NM_001145670,NM_001145671,NM_001145672,NM_003603,NM_003265	chr4,chr4,chr4,chr4,chr4	-,-,-,-,+	SORBS2,SORBS2,SORBS2,SORBS2,TLR3	-145,24,-153,-163,256703
chr2:39346187-39346480	chr2	+	39346230	39346492	True	NM_005633,NM_001145451	chr2,chr2	-,+	SOS1,ARHGEF33	1162,-199785
chr1:22137696-22138640	chr1	+	22137894	22138675	True	NM_001032730,NM_001013693	chr1,chr1	-,+	USP48,LDLRAD2	-28206,82
chr15:72611478-72611964	chr15	+	72611516	72612004	True	NM_052840,NR_027262,NM_001172684	chr15,chr15,chr15	-,+,-	CELF6,C15orf34,CELF6	571,56449,333
chr6:20268611-20270603	chr6	+	20268969	20270623	True	NM_001949,NM_001080480	chr6,chr6	+,-	E2F3,MBOAT1	131513,-56299
chr19:55143843-55144262	chr19	+	55143967	55144033	True	NM_001081639,NM_001081638,NM_001081637,NM_145057	chr19,chr19,chr19,chr19	+,+,+,-	LILRB1,LILRB1,LILRB1,CDC42EP5	-2110,-2110,-2050,-159545
chr15:66649556-66650015	chr15	+	66649566	66649900	True	NM_017858,NR_004388,NM_002755	chr15,chr15,chr15	-,-,+	TIPIN,SCARNA14,MAP2K1	-512,-9886,29310
chr14:75897007-75897340	chr14	+	75897016	75897374	True	NM_130469,NM_001135049,NM_001135048,NM_007176,NM_001135047	chr14,chr14,chr14,chr14,chr14	+,+,+,-,+	JDP2,JDP2,JDP2,C14orf1,JDP2	-2007,1462,-2147,230214,-2558
chr16:25030064-25031167	chr16	+	25030315	25031132	True	NM_018054,NM_001006634,NM_001032391	chr16,chr16,chr16	-,-,+	ARHGAP17,ARHGAP17,LCMT1	-3640,-3640,91914
chr10:112684018-112684547	chr10	+	112684061	112684553	True	NM_007373,NM_001195305,NM_001195304,NM_001195307,NM_001195306,NR_024141	chr10,chr10,chr10,chr10,chr10,chr10	+,-,-,-,-,-	SHOC2,BBIP1,BBIP1,BBIP1,BBIP1,BBIP1	-4824,-4937,-4937,-4937,-5367,-4937
chr8:144718631-144719238	chr8	+	144718681	144719155	True	NM_001082480,NM_003313	chr8,chr8	+,-	ZNF623,TSTA3	-359,-18949
chr2:97308176-97310141	chr2	+	97308384	97309449	True	NM_017991,NM_001113382,NM_001115016	chr2,chr2,chr2	-,+,-	KIAA1310,FER1L5,KIAA1310	-4269,-33,-4269
chr15:85924920-85926010	chr15	+	85925109	85926053	True	NM_007200,NR_031682,NM_006738	chr15,chr15,chr15	+,-,+	AKAP13,MIR1276,AKAP13	-1289,387806,-1289
chr6:100909428-100911123	chr6	+	100909488	100911058	True	NM_021620,NM_005068	chr6,chr6	+,-	PRDM13,SIM1	-854889,543
chr2:29092810-29093688	chr2	+	29092880	29093562	True	NM_017910,NM_015131	chr2,chr2	-,+	TRMT61B,WDR43	37,23970
chr14:75529238-75530449	chr14	+	75529386	75530442	True	NM_203488,NM_001042430,NM_001107,NM_024643	chr14,chr14,chr14,chr14	-,+,-,+	ACYP1,FAM164C,ACYP1,FAM164C	344,5856,344,5856
chr6:10036396-10038261	chr6	+	10036397	10038303	True	NM_001032280,NR_033910	chr6,chr6	-,+	TFAP2A,LOC100130275	374356,374247
chr4:189270807-189271135	chr4	+	189270905	189271059	True	NM_173553,NR_033869	chr4,chr4	-,+	TRIML2,LOC401164	-244497,105672
chrX:134866911-134867152	chrX	+	134866953	134867125	True	NM_152582,NM_001017436	chrX,chrX	+,+	CT45A2,CT45A4	-790,-790
chrX:134866911-134867152	chrX	+	134884227	134884335	False	NM_001017436,NM_001017435	chrX,chrX	-,+	CT45A4,CT45A3	52450,-790
chrX:134866911-134867152	chrX	-	134935823	134935995	False	NM_018666,NM_001017436	chrX,chrX	+,-	SAGE1,CT45A4	39789,790
chrX:134866911-134867152	chrX	-	134953146	134953254	False	NM_001007551,NM_018666,NM_001172288	chrX,chrX,chrX	-,+,-	CT45A5,SAGE1,CT45A5	790,22530,790
chrX:134866911-134867152	chrX	-	134970396	134970504	False	NM_001017438,NM_018666	chrX,chrX	-,+	CT45A6,SAGE1	790,5280
chr2:113240396-113240607	chr2	+	113240448	113240656	True	NM_153712,NM_001164463	chr2,chr2	+,-	TTL,RGPD8	-756,-49226
chr16:31106861-31107215	chr16	+	31106929	31107202	True	NM_001122957,NM_024006,NM_206824,NM_001039503	chr16,chr16,chr16,chr16	+,-,-,-	BCKDK,VKORC1,VKORC1,PRSS53	12459,-653,-653,-6799
chr17:51902310-51902792	chr17	+	51902372	51902744	True	NM_032559,NR_027941	chr17,chr17	+,-	KIF2B,COX11	-2185,1143370
chr19:55837120-55837379	chr19	+	55837236	55837390	True	NM_001085488,NM_032701	chr19,chr19	-,+	TMEM150B,SUV420H2	-528,13830
chr11:61683672-61683974	chr11	+	61683911	61683973	True	NM_013401,NM_001139443	chr11,chr11	-,+	RAB3IL1,BEST1	1074,33382
chr22:45809373-45809911	chr22	+	45809472	45809754	True	NM_148674,NM_015653	chr22,chr22	-,+	SMC1B,RIBC2	10,-13
chr9:20664771-20665694	chr9	+	20664770	20665648	True	NM_004529,NM_017794	chr9,chr9	-,+	MLLT3,KIAA1797	-42256,-6515
chr10:71904930-71905266	chr10	+	71904934	71905136	True	NM_018649,NM_001040273,NM_173555	chr10,chr10,chr10	+,-,-	H2AFY2,TYSND1,TYSND1	-92628,1410,1410
chr1:245130403-245131517	chr1	+	245130503	245131434	True	NR_026587,NR_026586,NR_026588,NM_001143943,NM_032328,NM_031844	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-	EFCAB2,EFCAB2,EFCAB2,EFCAB2,EFCAB2,HNRNPU	2196,1849,2196,2196,1736,-102676
chr17:40305288-40305716	chr17	+	40305456	40305744	True	NM_004583,NM_201434,NM_033194	chr17,chr17,chr17	-,-,+	RAB5C,RAB5C,HSPB9	1328,1328,-30758
chr2:27295230-27295486	chr2	+	27295297	27295481	True	NM_007046,NM_001134693	chr2,chr2	+,-	EMILIN1,OST4	5953,-730
chr22:19942375-19942983	chr22	+	19942680	19942950	True	NM_001135162,NM_001135161,NM_007310,NM_006440	chr22,chr22,chr22,chr22	+,+,+,-	COMT,COMT,COMT,TXNRD2	-3693,-4278,7119,-13321
chr4:70915123-70915330	chr4	+	70915122	70915377	True	NM_001891,NM_002159	chr4,chr4	-,+	CSN2,HTN1	-88396,781
chr20:55108932-55109390	chr20	+	55109223	55109397	True	NM_001012971,NM_001013646,NM_080615	chr20,chr20,chr20	+,+,-	C20orf106,C20orf107,GCNT7	-9494,-977,-8242
chr17:46115675-46115895	chr17	+	46115744	46115926	True	NM_003204,NR_029687,NM_016429	chr17,chr17,chr17	+,-,-	NFE2L1,MIR152,COPZ2	9759,-1131,-592
chr7:150411867-150412456	chr7	+	150411875	150412495	True	NM_130759,NM_001199577,NR_024115	chr7,chr7,chr7	+,+,-	GIMAP1,GIMAP1-GIMAP5,GIMAP6	1149,1149,-82195
chr11:27679730-27680184	chr11	+	27679816	27680218	True	NM_170735,NM_001143816,NR_033315	chr11,chr11,chr11	-,-,+	BDNF,BDNF,BDNF-AS1	1028,1028,-151468
chr3:122347130-122348227	chr3	+	122347132	122347967	True	NM_031458,NM_152615	chr3,chr3	-,+	PARP9,PARP15	-63609,-12658
chr1:51426046-51426748	chr1	+	51426091	51426575	True	NM_001262,NM_007051,NM_078626	chr1,chr1,chr1	+,-,+	CDKN2C,FAF1,CDKN2C	7791,-155,9066
chr20:49641093-49642733	chr20	+	49641287	49642776	True	NM_002237,NM_014484	chr20,chr20	-,+	KCNG1,MOCS3	-1612,-65976
chr5:155767790-155768811	chr5	+	155767909	155768699	True	NM_001128209,NM_001146726	chr5,chr5	+,-	SGCD,TIMD4	-14206,621617
chr16:19426790-19428773	chr16	+	19426970	19428102	True	NM_001105249,NM_001105248,NM_016641	chr16,chr16,chr16	+,+,-	TMC5,TMC5,GDE1	-4964,-4964,105399
chr4:76940900-76941974	chr4	+	76940902	76941869	True	NM_001565,NM_001130017	chr4,chr4	-,+	CXCL10,ART3	2871,-8635
chr17:38857847-38858442	chr17	+	38857896	38858275	True	NM_019016,NM_001195387	chr17,chr17	-,+	KRT24,TMEM99	1777,117068
chr2:132202744-132203032	chr2	+	132202824	132202972	True	NR_002826,NM_080386	chr2,chr2	-,+	LOC401010,TUBA3D	-357,30693
chr5:149117411-149118250	chr5	+	149117575	149118061	True	NM_001172698,NM_001892,NM_133263	chr5,chr5,chr5	+,-,+	PPARGC1B,CSNK1A1,PPARGC1B	-7819,-186568,-7819
chr2:191159285-191160376	chr2	+	191159482	191160393	True	NM_001128928,NM_014362	chr2,chr2	+,-	INPP1,HIBCH	47802,24437
chr20:43105180-43107156	chr20	+	43105499	43107195	True	NM_198941,NM_024331,NM_001039199	chr20,chr20,chr20	-,+,+	SERINC3,TTPAL,TTPAL	43581,-1016,-1016
chr3:118920371-118922042	chr3	+	118920563	118921896	True	NM_006952,NM_003778	chr3,chr3	+,-	UPK1B,B4GALT4	-28189,37916
chr19:38811289-38811506	chr19	+	38811485	38811545	True	NM_001145462,NM_001145461,NM_001039671,NM_001145463,NM_001039673,NM_001039672,NM_004823	chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,+	YIF1B,YIF1B,YIF1B,YIF1B,YIF1B,YIF1B,KCNK6	-5040,-5040,-5040,-4879,-4879,-4879,-1052
chr1:45263893-45265079	chr1	+	45264007	45264923	True	NM_001013632,NM_004073,NM_001136537	chr1,chr1,chr1	-,+,+	TCTEX1D4,PLK3,BTBD19	8084,1112,9230
chr18:30351023-30351266	chr18	+	30351038	30351311	True	NR_003558,NM_020805	chr18,chr18	+,-	WBP11P1,KLHL14	-259463,1713
chr1:110306505-110307449	chr1	+	110306627	110307379	True	NM_139053,NM_000851,NM_133181,NM_024526	chr1,chr1,chr1,chr1	-,+,-,-	EPS8L3,GSTM5,EPS8L3,EPS8L3	17,-51814,17,17
chr7:100726432-100727712	chr7	+	100726523	100727478	True	NM_003378,NM_030961	chr7,chr7	-,+	VGF,TRIM56	81425,1307
chr6:10413708-10413914	chr6	+	10413708	10413780	True	NM_001042425,NM_001032280,NM_003220,NR_033910	chr6,chr6,chr6,chr6	-,-,-,+	TFAP2A,TFAP2A,TFAP2A,LOC100130275	6067,-1101,1740,-1208
chr12:52798712-52799863	chr12	+	52798777	52799697	True	NM_002284,NM_033033	chr12,chr12	+,-	KRT86,KRT82	-103179,529
chr19:13070895-13072043	chr19	+	13071133	13071507	True	NM_152654,NM_052850	chr19,chr19	+,-	DAND5,GADD45GIP1	8924,-3083
chr11:67100934-67101999	chr11	+	67100957	67101614	True	NM_021173,NR_024469	chr11,chr11	-,+	POLD4,LOC100130987	19488,-15698
chr19:53867922-53868483	chr19	+	53867978	53868524	True	NM_033341,NR_003699	chr19,chr19	-,+	BIRC8,ZNF525	-73103,443
chr6:36645498-36645810	chr6	+	36645519	36645866	True	NR_037491,NM_078467,NM_000389,NR_037152,NR_037150,NR_037151	chr6,chr6,chr6,chr6,chr6,chr6	-,+,+,+,+,+	MIR3925,CDKN1A,CDKN1A,CDKN1A,CDKN1A,CDKN1A	-55230,-1310,589,-1340,-1263,620
chr5:110560716-110562420	chr5	+	110560773	110562449	True	NM_001744,NM_139164	chr5,chr5	+,-	CAMK4,STARD4	-883,285758
chr2:73293609-73294843	chr2	+	73293793	73294875	True	NM_144579,NM_001134462	chr2,chr2	-,+	SFXN5,NOTO	4140,134510
chr17:39092844-39093118	chr17	+	39092942	39093164	True	NM_015515,NM_001195386	chr17,chr17	-,+	KRT23,TMEM99	722,-117556
chr9:79010681-79011527	chr9	+	79010746	79011229	True	NM_018339,NR_026890	chr9,chr9	-,+	RFK,RPSAP9	-1302,2285
chr17:79353533-79354136	chr17	+	79353583	79354171	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	19368,-49109
chr2:231576627-231577266	chr2	+	231576861	231577285	True	NM_001130850,NM_005683,NM_001130849,NM_016289	chr2,chr2,chr2,chr2	+,-,+,+	CAB39,GPR55,CAB39,CAB39	977,212706,977,271
chr12:120908086-120908513	chr12	+	120908134	120908560	True	NM_001037494,NM_003769	chr12,chr12	+,-	DYNLL1,SRSF9	-525,-576
chr1:104696933-104698876	chr1	+	104696958	104698495	True	NM_001008221,NR_033990	chr1,chr1	-,+	AMY1A,LOC100129138	-457885,-81366
chr10:47729863-47730368	chr10	+	47730019	47730075	True	NR_024495,NM_001630	chr10,chr10	-,+	LOC642826,ANXA8L2	-486525,16844
chr1:155197122-155198060	chr1	+	155197143	155198017	True	NR_002188,NM_198883	chr1,chr1	-,+	GBAP1,MTX1	-86,-18704
chr6:34725070-34725277	chr6	+	34725069	34725321	True	NM_024294,NR_029472,NM_003093	chr6,chr6,chr6	-,+,+	C6orf106,SNRPC,SNRPC	-60444,-249,-249
chr4:57685667-57686862	chr4	+	57685672	57686685	True	NM_021114,NM_005612	chr4,chr4	-,+	SPINK2,REST	1258,87356
chr16:22390003-22391503	chr16	+	22390233	22391260	True	NM_001802,NR_027154	chr16,chr16	-,+	CDR2,LOC641298	-4295,57068
chr7:72473609-72474073	chr7	+	72473609	72473897	True	NM_001013739,NR_003614	chr7,chr7	-,+	STAG3L3,PMS2L2	2611,2782
chr7:72473609-72474073	chr7	-	74991004	74991292	False	NR_003614,NM_001002840,NM_018991	chr7,chr7,chr7	-,+,+	PMS2L2,STAG3L1,STAG3L1	-2789,-2611,-2611
chr7:72473609-72474073	chr7	+	74303869	74304157	False	NR_027777,NR_027776,NM_001025202,NR_027775	chr7,chr7,chr7,chr7	+,+,-,+	PMS2P5,PMS2P5,STAG3L2,PMS2P5	2736,2736,2627,2736
chr13:53117662-53118693	chr13	+	53117678	53118719	True	NM_016075,NR_002793	chr13,chr13	-,+	VPS36,TPTE2P3	-92915,-54602
chr13:53117662-53118693	chr13	-	52836038	52837089	False	NM_001098525,NR_033775	chr13,chr13	+,-	CKAP2,TPTE2P2	192405,27081
chr2:178077249-178077516	chr3	+	75263646	75263702	False	NR_031714,NR_024241	chr3,chr3	+,-	MIR1324,FAM86DP	416211,220614
chr2:178077249-178077516	chr2	+	178077291	178077529	True	NM_194247,NR_036075	chr2,chr2	+,-	HNRNPA3,MIR3128	28,43259
chr11:96120736-96122398	chr11	+	96120755	96122411	True	NM_024725,NM_003772	chr11,chr11	-,+	CCDC82,JRKL	722,746
chr5:34039047-34040558	chr5	+	34039169	34040486	True	NM_030945,NM_016568,NM_181435	chr5,chr5,chr5	-,+,-	C1QTNF3,RXFP3,C1QTNF3	2942,-102729,2942
chr12:27408732-27410471	chr12	+	27408792	27410470	True	NM_001080406,NM_015000	chr12,chr12	-,+	C12orf71,STK38L	-173337,-11766
chr16:70719861-70720127	chr16	+	70719950	70720154	True	NM_001172772,NM_138383	chr16,chr16	+,-	IL34,MTSS1L	-62106,0
chr1:202679721-202680660	chr1	+	202680068	202680489	True	NR_002929,NM_177402	chr1,chr1	+,-	LOC148709,SYT2	150392,-517
chr5:148202826-148204808	chr5	+	148203647	148204657	True	NM_000024,NM_000870	chr5,chr5	+,-	ADRB2,HTR4	1498,-169908
chr14:89029935-89031576	chr14	+	89029939	89031251	True	NM_207660,NM_207661,NM_001160104,NM_001160103,NM_007039,NM_024824	chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,+,-,+	ZC3H14,ZC3H14,ZC3H14,ZC3H14,PTPN21,ZC3H14	-737,-299,-737,-737,-8816,-737
chr6:43020476-43021371	chr6	+	43020553	43021029	True	NM_015950,NM_001168370,NM_014780,NM_201521,NM_201523,NM_201522,NM_138343	chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,+,+,+,+	MRPL2,CUL7,CUL7,KLC4,KLC4,KLC4,KLC4	6263,704,704,6342,6599,7152,6342
chr2:204004948-204006719	chr2	+	204005296	204006743	True	NM_177538,NM_018256	chr2,chr2	+,-	CYP20A1,WDR12	96420,-228347
chr7:150883495-150883890	chr7	+	150883559	150883939	True	NM_001142460,NM_080871,NM_001142459,NM_019015	chr7,chr7,chr7,chr7	-,-,-,+	ASB10,ASB10,ASB10,CHPF2	589,1030,589,45645
chr19:47923003-47923329	chr19	+	47923048	47923316	True	NM_001009813,NM_014681,NM_020160	chr19,chr19,chr19	-,+,-	MEIS3,DHX34,MEIS3	-263,-70561,-263
chr3:188904367-188905066	chr3	+	188904411	188904720	True	NM_198485,NM_018192	chr3,chr3	+,-	TPRG1,LEPREL1	-14699,934251
chr12:94074751-94075468	chr12	+	94075147	94075440	True	NM_003348,NM_003805	chr12,chr12	-,+	UBE2N,CRADD	-239121,-4055
chr6:14897049-14898291	chr6	+	14897068	14898160	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	348366,765187
chr11:82612956-82614239	chr11	+	82612979	82614287	True	NM_005040,NM_145018,NM_199418	chr11,chr11,chr11	-,+,-	PRCP,C11orf82,PRCP	-1422,-298,-1422
chr3:14218454-14219816	chr3	+	14218610	14219714	True	NM_004628,NM_014463,NR_027299,NM_001145769	chr3,chr3,chr3,chr3	-,+,-,-	XPC,LSM3,XPC,XPC	508,513,508,508
chr18:3378797-3379421	chr18	+	3378893	3379467	True	NM_019856,NM_174886	chr18,chr18	-,+	MYOM1,TGIF1	-158787,32604
chr14:23779019-23780242	chr14	+	23779133	23780175	True	NM_001199864,NM_001199839,NM_004050,NM_004643,NR_026862	chr14,chr14,chr14,chr14,chr14	+,+,+,+,-	BCL2L2-PABPN1,BCL2L2,BCL2L2,PABPN1,PPP1R3E	-3214,-3116,-3214,9221,-7076
chr2:241376346-241378014	chr2	+	241376362	241377466	True	NR_024014,NM_002081	chr2,chr2	-,+	PP14571,GPC1	18701,-1298
chr17:42348422-42348672	chr17	+	42348423	42348675	True	NM_001144826,NM_000342	chr17,chr17	+,-	RUNDC3A,SLC4A1	37251,-2921
chr3:49903998-49904266	chr3	+	49904104	49904264	True	NM_203370,NM_024046	chr3,chr3	+,-	C3orf54,CAMKV	-63468,3155
chr4:3074513-3074992	chr4	+	3074776	3074976	True	NM_002111,NM_003703	chr4,chr4	+,-	HTT,NOP14	1431,-109658
chr21:30253274-30254253	chr21	+	30253276	30253950	True	NM_013240,NM_001001992,NM_182749	chr21,chr21,chr21	-,+,-	N6AMT1,USP16,N6AMT1	3805,142987,3805
chr5:171436203-171437622	chr5	+	171436414	171437662	True	NM_012300,NM_001171183,NM_033645,NM_033644	chr5,chr5,chr5,chr5	-,+,-,-	FBXW11,EFCAB9,FBXW11,FBXW11	-2537,183513,-2537,-2537
chr12:57397297-57397540	chr12	+	57397306	57397586	True	NM_007264,NM_014830	chr12,chr12	+,-	GPR182,ZBTB39	-9002,2761
chr8:25902058-25902282	chr8	+	25902177	25902309	True	NM_002717,NM_022659	chr8,chr8	+,-	PPP2R2A,EBF2	246697,133
chr5:74805435-74806632	chr5	+	74805511	74806617	True	NM_005713,NM_031361,NM_016218,NM_001130105	chr5,chr5,chr5,chr5	-,-,+,-	COL4A3BP,COL4A3BP,POLK,COL4A3BP	887,887,1039,1239
chr19:4459212-4459639	chr19	+	4459290	4459356	True	NM_025241,NM_001171091,NM_001001520	chr19,chr19,chr19	-,-,+	UBXN6,UBXN6,HDGFRP2	-1499,-3995,12898
chr19:11848370-11848714	chr19	+	11848396	11848738	True	NM_152355,NM_001080493	chr19,chr19	+,-	ZNF441,ZNF823	29076,1072
chr2:103339992-103340265	chr2	+	103340032	103340314	True	NM_144632,NM_032718	chr2,chr2	+,-	TMEM182,MFSD9	38175,13073
chr16:30077060-30077385	chr16	+	30077098	30077228	True	NM_004608,NM_184043,NM_184041,NM_001127617	chr16,chr16,chr16,chr16	-,+,+,+	TBX6,ALDOA,ALDOA,ALDOA	26027,-1549,-105,-1176
chr1:2321295-2321918	chr1	+	2321383	2321933	True	NM_024848,NM_007033	chr1,chr1	-,+	MORN1,RER1	1110,1280
chr2:9696568-9697147	chr2	+	9696568	9697177	True	NM_001039613,NM_003183	chr2,chr2	+,-	IAH1,ADAM17	-81949,-651
chr1:229569056-229569616	chr1	+	229569364	229569642	True	NM_006542,NM_001100	chr1,chr1	+,-	SPHAR,ACTA1	-129286,251
chr9:99673211-99673643	chr9	+	99673302	99673382	True	NR_028350,NM_001001662	chr9,chr9	+,-	LOC441454,ZNF782	-1996,-56913
chr9:99673211-99673643	chr9	-	97108812	97108892	False	NM_017561,NR_033937	chr9,chr9	-,+	FAM22F,LOC100132077	-17886,-14105
chr22:39473655-39473984	chr22	+	39473704	39473888	True	NM_021822,NM_175709	chr22,chr22	+,-	APOBEC3G,CBX7	-747,74700
chr19:5904066-5904358	chr19	+	5904082	5904388	True	NR_034166,NM_001193375,NM_001017921,NM_175614,NM_004058,NM_080590	chr19,chr19,chr19,chr19,chr19,chr19	-,-,+,-,+,+	NDUFA11,NDUFA11,VMAC,NDUFA11,CAPS,CAPS	-58,-58,463,-58,9804,9804
chr7:45959831-45960069	chr7	+	45959831	45960118	True	NM_000596,NM_000598,NM_001013398	chr7,chr7,chr7	+,-,-	IGFBP1,IGFBP3,IGFBP3	-31929,808,808
chr7:5012782-5013111	chr7	+	5012825	5012907	True	NM_198403,NR_023384,NR_023385,NR_015449	chr7,chr7,chr7,chr7	-,+,+,+	MMD2,RNF216L,RNF216L,RNF216L	-13981,708,708,708
chr19:2721765-2722181	chr19	+	2721794	2722174	True	NM_145173,NM_003249	chr19,chr19	-,+	DIRAS1,THOP1	-404,63331
chr3:124304429-124305597	chr3	+	124304524	124305569	True	NM_007064,NM_002213	chr3,chr3	+,-	KALRN,ITGB5	-1069,300625
chr22:22648042-22649431	chr15	+	21355839	21355902	False	NR_027411,NR_028506	chr15,chr15	+,-	GOLGA8C,NF1P1	-588229,-221214
chr22:22648042-22649431	chr15	+	20349223	20349286	False	NR_036432,NR_027411	chr15,chr15	-,+	HERC2P3,GOLGA8C	362210,418387
chr22:22648042-22649431	chr15	-	20507583	20507646	False	NR_036432,NR_027411	chr15,chr15	-,+	HERC2P3,GOLGA8C	203850,260027
chr22:22648042-22649431	chr22	+	22648301	22649249	True	NM_080764,NR_027293	chr22,chr22	-,+	ZNF280B,LOC96610	214306,3213
chr22:22648042-22649431	chr2	-	87580332	87580498	False	NR_026846,NR_024204	chr2,chr2	-,+	LOC285074,NCRNA00152	-276796,174475
chr22:22648042-22649431	chr2	+	91746482	91746648	False	NR_003503,NR_027238	chr2,chr2	+,-	GGT8P,LOC654342	216719,101493
chr22:22648042-22649431	chr2	-	90288295	90288461	False	NM_004836,NR_015424	chr2,chr2	-,+	EIF2AK3,ANKRD36BP2	-1361201,-1223043
chr22:22648042-22649431	chr2	+	90523613	90523779	False	NR_003503,NR_027238	chr2,chr2	+,-	GGT8P,LOC654342	1439588,1324362
chr22:22648042-22649431	chr9	+	42801835	42802001	False	NR_026759,NR_026558	chr9,chr9	-,+	FAM95B1,AQP7P3	231477,56150
chr22:22648042-22649431	chr9	-	69728376	69728542	False	NM_001126334,NR_024443	chr9,chr9	-,+	FOXD4L5,LOC100133920	450439,-77182
chr22:22648042-22649431	chr9	-	70093884	70094050	False	NM_001126334,NR_024443	chr9,chr9	-,+	FOXD4L5,LOC100133920	84931,-442690
chr22:22648042-22649431	chr9	-	70344620	70344786	False	NM_201453,NM_001099279	chr9,chr9	+,-	CBWD3,FOXD4L2	512052,85111
chr22:22648042-22649431	chr9	+	66953825	66953991	False	NR_024443,NR_024496	chr9,chr9	-,+	LOC100133920,LOC442421	77157,-459723
chr22:22648042-22649431	chr9	-	67344430	67344493	False	NM_032250,NR_002817	chr9,chr9	+,-	ANKRD20A1,AQP7P1	582267,-54938
chr11:62476244-62477156	chr11	+	62476366	62477204	True	NM_001130702,NR_037949,NR_037948,NM_001122955,NM_012202,NM_032667	chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,+,-	BSCL2,BSCL2,BSCL2,BSCL2,GNG3,BSCL2	-2579,-63,-63,-1187,-1303,-2579
chr20:9100635-9101668	chr20	+	9100673	9101527	True	NM_001172646,NM_020341	chr20,chr20	+,-	PLCB4,PAK7	-51023,718210
chr1:169587480-169587714	chr1	+	169587480	169587716	True	NM_003005,NM_018186	chr1,chr1	-,+	SELP,C1orf112	11711,176833
chr1:23954817-23955288	chr1	+	23955089	23955149	True	NM_002167,NR_027042	chr1,chr1	-,+	ID3,MDS2	-68767,-1316
chr19:49078859-49079221	chr19	+	49079026	49079238	True	NM_017708,NM_004605	chr19,chr19	-,+	FAM83E,SULT2B1	37506,-85
chr9:112174812-112175527	chr9	+	112175100	112175220	True	NR_026918,NM_001037293	chr9,chr9	-,+	PTPN3,PALM2	4901,227847
chr6:38690923-38691853	chr6	+	38690924	38691735	True	NM_006708,NM_001371	chr6,chr6	-,+	GLO1,DNAH8	-19972,-423
chr9:131592108-131592905	chr9	+	131592110	131592591	True	NM_016390,NM_004435	chr9,chr9	-,+	C9orf114,ENDOG	-25,-11382
chr11:71293226-71293824	chr11	+	71293254	71293664	True	NM_001012710,NM_001005405	chr11,chr11	+,-	KRTAP5-10,KRTAP5-11	-16696,307
chr22:38380172-38380533	chr22	+	38380372	38380572	True	NM_006941,NM_021974	chr22,chr22	-,+	SOX10,POLR2F	17,-30749
chr8:57908686-57909262	chr8	+	57908849	57909236	True	NR_026772,NM_017813	chr8,chr8	+,-	C8orf71,IMPAD1	282865,-2422
chr14:21868377-21870071	chr14	+	21868475	21869547	True	NR_002916,NM_014828,NR_003029	chr14,chr14,chr14	-,+,-	SNORD8,TOX4,SNORD9	-2915,75787,-8063
chr1:202930570-202931783	chr1	+	202930642	202931699	True	NM_016243,NM_001127687,NM_015999,NM_138391	chr1,chr1,chr1,chr1	-,-,-,+	CYB5R1,ADIPOR1,ADIPOR1,TMEM183A	4755,-2942,-3157,44834
chr16:2319434-2319663	chr16	+	2319450	2319646	True	NR_037448,NM_080594,NM_006711,NR_030636	chr16,chr16,chr16,chr16	+,-,-,+	MIR3677,RNPS1,RNPS1,MIR940	1067,-1037,-1592,2101
chr16:76364778-76365175	chr16	+	76364796	76365024	True	NM_138994,NM_005548	chr16,chr16	+,-	CNTNAP4,KARS	-21122,-683211
chr16:1029333-1029725	chr16	+	1029654	1029766	True	NR_033646,NR_033645,NM_014587,NR_036442,NM_022773	chr16,chr16,chr16,chr16,chr16	-,-,+,-,-	LMF1,LMF1,SOX8,LMF1,LMF1	-8670,1602,2041,1602,-8670
chr13:103503936-103504436	chr13	+	103504014	103504428	True	NM_000123,NM_024089	chr13,chr13	+,-	ERCC5,KDELC1	-5890,-52610
chr1:153642017-153642466	chr1	+	153642216	153642432	True	NM_000906,NM_004515	chr1,chr1	+,-	NPR1,ILF2	8731,1103
chr10:75568903-75569738	chr10	+	75568941	75569371	True	NM_015037,NM_003635	chr10,chr10	+,-	KIAA0913,NDST2	-23400,2268
chr2:210288933-210289208	chr2	+	210288942	210289172	True	NM_152519,NM_001039538	chr2,chr2	-,+	C2orf67,MAP2	746929,-222
chr9:131104354-131105536	chr9	+	131104360	131105579	True	NM_015679,NM_005094	chr9,chr9	-,+	TRUB2,SLC27A4	-19663,-1573
chr8:144977819-144978097	chr8	+	144977856	144978094	True	NM_000837,NM_031308	chr8,chr8	+,-	GRINA,EPPK1	86131,-30422
chr9:104248418-104248739	chr9	+	104248433	104248761	True	NM_019592,NM_032342	chr9,chr9	+,-	RNF20,C9orf125	47371,764
chr8:144502612-144502919	chr8	+	144502732	144502930	True	NM_201589,NM_052924	chr8,chr8	-,+	MAFA,RHPN1	9722,-51758
chrX:101102336-101103755	chrX	+	101102480	101103606	True	NM_032946,NR_028089,NM_177948	chrX,chrX,chrX	-,-,+	NXF5,NXF5,ARMCX3	8993,8993,-224180
chr11:128814290-128815146	chr11	+	128814544	128815018	True	NM_000890,NM_001195194,NM_001195195,NM_022112	chr11,chr11,chr11,chr11	+,-,-,-	KCNJ5,TP53AIP1,TP53AIP1,TP53AIP1	-53282,-6815,-1250,-1250
chr8:10512551-10513006	chr8	+	10512689	10513046	True	NM_001040032,NM_178857	chr8,chr8	+,-	C8orf74,RP1L1	17100,-72
chr6:152125859-152126743	chr6	+	152125890	152126536	True	NM_017909,NM_000125,NM_001122741,NM_001122740	chr6,chr6,chr6,chr6	-,+,+,+	RMND1,ESR1,ESR1,ESR1	-352574,2277,271,1917
chr16:30720856-30721516	chr16	+	30720915	30721545	True	NR_002966,NM_001014979	chr16,chr16	+,-	SNORA30,C16orf93	312,52070
chr14:73393471-73393679	chr14	+	73393512	73393718	True	NM_181340,NM_181341,NM_015604,NM_012074,NM_001163508,NM_001163509	chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,-,+,+	DCAF4,DCAF4,DCAF4,DPF3,DCAF4,DCAF4	-523,-523,-523,-32703,-523,-523
chr15:82826906-82828202	chr15	+	82826945	82828221	True	NM_001199057,NR_033579,NM_001021	chr15,chr15,chr15	-,+,-	LOC100505503,LOC440297,RPS17	-2080,-73549,-2080
chr15:82826906-82828202	chr15	+	83211287	83212563	False	NM_001199057,NR_033579,NM_001021	chr15,chr15,chr15	-,+,-	LOC100505503,LOC440297,RPS17	-2079,-81305,-2079
chr19:3770936-3771450	chr19	+	3771046	3771474	True	NM_032753,NM_172251,NM_004886	chr19,chr19,chr19	-,+,-	RAX2,MRPL54,APBA3	795,-8432,-9373
chr10:134145270-134145480	chr10	+	134145322	134145388	True	NR_026559,NM_030626,NM_173575,NM_001143757,NM_001143759,NM_001143758	chr10,chr10,chr10,chr10,chr10,chr10	+,+,-,+,+,+	LRRC27,LRRC27,STK32C,LRRC27,LRRC27,LRRC27	5222,225,-23845,352,225,225
chr3:52311921-52312168	chr3	+	52311950	52312204	True	NM_001144951,NR_026701,NM_025222,NR_026700,NR_029660,NM_145262,NR_026699,NR_026702	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,-,+,-,+,+,+	GLYCTK,GLYCTK,WDR82,GLYCTK,MIRLET7G,GLYCTK,GLYCTK,GLYCTK	9631,9631,505,9631,-9573,9631,9631,9631
chr2:69864125-69864667	chr2	+	69864186	69864704	True	NM_014911,NM_001153	chr2,chr2	-,+	AAK1,ANXA4	6323,104422
chr3:133647132-133647568	chr3	+	133647165	133647597	True	NM_021203,NM_025041	chr3,chr3	+,-	SRPRB,C3orf36	-144339,1109
chr13:35512453-35513537	chr13	+	35512883	35513586	True	NM_005584,NM_015678	chr13,chr13	-,+	MAB21L1,NBEA	537303,2837
chr4:83293824-83294440	chr4	+	83293868	83294177	True	NM_001003810,NM_031369,NM_021204,NM_002138,NM_031370	chr4,chr4,chr4,chr4,chr4	-,-,+,-,-	HNRNPD,HNRNPD,ENOPH1,HNRNPD,HNRNPD	1031,1031,57548,1031,1031
chr19:51411910-51412373	chr19	+	51411909	51412349	True	NM_004917,NM_005551	chr19,chr19	-,+	KLK4,KLK2	1695,-35271
chr1:213021840-213022562	chr1	+	213022270	213022390	True	NM_014053,NM_001024601,NR_027286,NR_027285	chr1,chr1,chr1,chr1	+,-,-,-	FLVCR1,C1orf227,NCRNA00292,NCRNA00292	9206,-1279,9152,9152
chr8:128460888-128461216	chr8	+	128460898	128461223	True	NM_001159542,NR_024393	chr8,chr8	+,-	POU5F1B,LOC727677	-33092,33218
chr19:784480-784867	chr19	+	784601	784785	True	NM_024888,NM_002819	chr19,chr19	-,+	LPPR3,PTBP1	37217,12606
chr4:88937324-88938040	chr4	+	88937388	88937746	True	NM_000297,NM_004827	chr4,chr4	+,-	PKD2,ABCG2	-8641,142315
chr7:44178668-44180649	chr7	+	44178767	44180621	True	NM_021223,NM_001129	chr7,chr7	-,+	MYL7,AEBP1	345,-34858
chr2:233412432-233413794	chr2	+	233412450	233413847	True	NM_005199,NM_004846,NM_145702	chr2,chr2,chr2	+,+,-	CHRNG,EIF4E2,TIGD1	-8064,1509,1438
chr7:141631724-141633689	chr7	+	141631836	141633526	True	NM_013252,NM_001001656	chr7,chr7	-,+	CLEC5A,OR9A4	13307,-13211
chr2:111181541-111182054	chr2	+	111181604	111182080	True	NR_037626,NR_037627,NR_027142,NR_027143	chr2,chr2,chr2,chr2	+,-,-,-	LOC100507334,LOC100288570,LOC440895,LOC440895	-178440,-211,-211,-211
chr2:111181541-111182054	chr2	-	110704579	110705055	False	NR_037627,NR_036225,NR_027142,NR_027143	chr2,chr2,chr2,chr2	+,-,+,+	LOC100288570,MIR4267,LOC440895,LOC440895	211,122614,211,211
chr2:111181541-111182054	chr2	-	111002527	111003003	False	NR_027063,NR_037626	chr2,chr2	-,+	NCRNA00116,LOC100507334	-22010,211
chr5:99397238-99398370	chr5	+	99397469	99397519	True	NM_198507,NR_027503	chr5,chr5	+,-	FAM174A,LOC100133050	473604,326489
chr5:99397238-99398370	chr5	-	98871450	98871500	False	NM_001270,NR_036530	chr5,chr5	-,+	CHD1,LOC100289230	-609212,-606663
chr5:99397238-99398370	chr5	+	99710894	99710944	False	NM_198507,NR_027503	chr5,chr5	+,-	FAM174A,LOC100133050	160179,13064
chr19:12998511-12999615	chr19	+	12998545	12999251	True	NM_006563,NM_001375,NM_000159,NM_013976	chr19,chr19,chr19,chr19	-,-,+,+	KLF1,DNASE2,GCDH,GCDH	-528,-6210,2722,2722
chr12:42710195-42710932	chr12	+	42710231	42710736	True	NM_016488,NM_201515,NM_201439,NM_201438,NM_001143788,NM_001143789,NM_033114,NM_001143787,NM_201440	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,+,+,+,+,-,+,+	PPHLN1,PPHLN1,PPHLN1,PPHLN1,PPHLN1,PPHLN1,ZCRB1,PPHLN1,PPHLN1	9210,9210,9210,9210,9210,9210,9255,9210,9210
chr6:33285573-33285876	chr6_qbl_hap6	+	4517858	4518108	False	NM_001145338,NM_001350,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	-4,4984,4984,-28254,-99,-3448,-3448,-3448,4984
chr6:33285573-33285876	chr6_mcf_hap5	+	4759354	4759604	False	NM_001145338,NM_001350,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	-4,4981,4981,-28249,-99,-3448,-3448,-3448,4981
chr6:33285573-33285876	chr6_cox_hap2	+	4729426	4729676	False	NM_001145338,NM_001350,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	-4,4985,4985,-28251,-99,-3450,-3450,-3450,4985
chr6:33285573-33285876	chr6	+	33285611	33285861	True	NM_001145338,NM_001350,NR_024517,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	-4,4982,4982,4982,-28250,-99,-3447,-3447,-3447,4982
chr6:33285573-33285876	chr6_dbb_hap3	+	4566935	4567185	False	NM_001145338,NM_001350,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	-4,4985,4985,-28248,-99,-3448,-3448,-3448,4985
chr2:182855163-182856909	chr2	+	182855280	182856886	True	NM_002500,NM_001080545	chr2,chr2	-,+	NEUROD1,PPP1R1C	-309888,-4792
chr14:24670624-24671206	chr14	+	24670624	24671064	True	NM_006405,NM_001014842,NM_174944,NM_001184739	chr14,chr14,chr14,chr14	-,-,+,+	TM9SF1,TM9SF1,TSSK4,TSSK4	-5742,-5742,3861,3861
chr6:166583177-166583820	chr6	+	166583189	166583839	True	NM_003181,NR_027284	chr6,chr6	-,+	T,LOC441177	-1058,-182201
chr6:6600745-6601675	chr6	+	6600928	6601677	True	NM_004271,NR_026970	chr6,chr6	+,-	LY86,LY86-AS1	-12057,21439
chr9:12694211-12695563	chr9	+	12694276	12695597	True	NM_000550,NM_003829	chr9,chr9	+,-	TYRP1,MPDZ	-941,554818
chr17:42927778-42928433	chr17	+	42927795	42928335	True	NM_016438,NM_001080383	chr17,chr17	+,-	HIGD1B,GJC1	-2572,-19616
chr15:75317560-75318048	chr15	+	75317572	75318014	True	NM_017793,NM_021823	chr15,chr15	-,+	RPP25,PPCDC	-67797,-1696
chr19:50379883-50380233	chr19	+	50380098	50380264	True	NM_032375,NM_007254,NM_024682,NM_001168222,NM_001098633,NM_001098632	chr19,chr19,chr19,chr19,chr19,chr19	-,-,+,+,-,-	AKT1S1,PNKP,TBC1D17,TBC1D17,AKT1S1,AKT1S1	364,-9276,417,417,398,430
chr19:41254614-41255189	chr19	+	41254613	41255231	True	NM_198476,NM_004596	chr19,chr19	-,+	C19orf54,SNRPA	647,1527
chr20:61560939-61561446	chr20	+	61560986	61561297	True	NM_001193370,NM_033081,NM_017896,NM_001193369,NM_022105,NM_080797,NM_080796	chr20,chr20,chr20,chr20,chr20,chr20,chr20	-,-,+,-,-,-,-	DIDO1,DIDO1,C20orf11,DIDO1,DIDO1,DIDO1,DIDO1	-3083,8058,8143,-3083,8058,8058,-3083
chr12:101565644-101566658	chr12	+	101565715	101566689	True	NM_014503,NM_145913	chr12,chr12	+,-	UTP20,SLC5A8	107215,37377
chr17:32905727-32905969	chr17	+	32905733	32905909	True	NM_207454,NM_207313	chr17,chr17	-,+	C17orf102,TMEM132E	529,1858
chr12:51664596-51665300	chr12	+	51664828	51665326	True	NM_001136269,NM_001033873,NM_001031628	chr12,chr12,chr12	+,-,-	DAZAP2,SMAGP,SMAGP	-32372,-834,-626
chr20:525289-526789	chr20	+	525588	526761	True	NM_031229,NM_177560,NM_001895,NM_177559	chr20,chr20,chr20,chr20	+,-,-,-	RBCK1,CSNK2A1,CSNK2A1,CSNK2A1	-136938,-1106,-1106,-1106
chr9:116226130-116226369	chr9	+	116226320	116226418	True	NM_017443,NM_017790	chr9,chr9	-,+	POLE3,RGS3	-53291,-362
chr19:8276308-8276630	chr19	+	8276358	8276471	True	NM_024552,NM_032447	chr19,chr19	+,-	LASS4,FBN3	-2192,-63973
chr2:160472684-160473500	chr2	+	160472743	160473404	True	NM_013450,NM_022826	chr2,chr2	-,+	BAZ2B,MARCH7	33,95605
chr7:27170654-27171389	chr7	+	27170909	27171427	True	NM_002141,NM_153631,NR_002795	chr7,chr7,chr7	-,-,+	HOXA4,HOXA3,HOXA11-AS1	-510,-4270,53599
chr3:33158150-33158453	chr3	+	33158150	33158292	True	NM_001135602,NM_006371	chr3,chr3	-,+	GLB1,CRTAP	-19456,-2758
chr19:52034570-52035144	chr19	+	52034576	52035084	True	NM_001177547,NM_198845,NM_198846,NM_001177549,NM_001177548,NM_007147,NM_001245	chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,+,-	SIGLEC6,SIGLEC6,SIGLEC6,SIGLEC6,SIGLEC6,ZNF175,SIGLEC6	76,76,76,76,76,39446,76
chr17:61556645-61557415	chr17	+	61556818	61557406	True	NM_152830,NM_001915,NM_000789,NM_001178057	chr17,chr17,chr17,chr17	+,-,+,+	ACE,CYB561,ACE,ACE	4771,-33096,-2447,4771
chr8:98882600-98883559	chr8	+	98882779	98883535	True	NR_002581,NM_030583,NM_002380	chr8,chr8,chr8	-,+,+	SNORA72,MATN2,MATN2	170960,-1521,-1521
chr1:248548162-248549400	chr1	+	248548318	248549249	True	NM_001005471,NM_001004691	chr1,chr1	+,-	OR2T6,OR2M7	1660,-60448
chr1:54199541-54200820	chr1	+	54199557	54200687	True	NM_147193,NM_000792	chr1,chr1	-,+	GLIS1,DIO1	38,159173
chr15:74501783-74502186	chr15	+	74501840	74502198	True	NM_022369,NM_001199042,NM_001199040,NM_001199041,NM_001142619,NM_001142618,NM_001142617,NM_001142620,NM_025055	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,-,-,-,-,-,-,+	STRA6,STRA6,STRA6,STRA6,STRA6,STRA6,STRA6,STRA6,CCDC33	-6620,-6620,66,-1445,-469,-6284,-469,-469,26468
chr1:9086476-9086912	chr1	+	9086563	9086765	True	NM_001215,NM_207420	chr1,chr1	+,-	CA6,SLC2A7	-80699,-159
chr12:128078166-128078769	chr12	+	128078373	128078689	True	NR_033970,NR_033987	chr12,chr12	-,+	LOC440117,FLJ37505	-719137,287472
chr11:70509421-70510395	chr11	+	70509546	70510360	True	NM_133266,NM_138565	chr11,chr11	-,+	SHANK2,CTTN	-1623,-264985
chr19:12163531-12163895	chr19	+	12163624	12163798	True	NM_001136501,NM_001080404	chr19,chr19	+,-	ZNF844,ZNF878	11747,3379
chr14:35348426-35349233	chr14	+	35348819	35349124	True	NR_002937,NM_182648,NM_013448	chr14,chr14,chr14	+,-,-	C14orf19,BAZ1A,BAZ1A	60003,-3966,-3966
chr17:30665964-30667379	chr17	+	30666152	30667144	True	NR_030362,NM_022344	chr17,chr17	+,-	MIR632,C17orf75	9983,2108
chr5:126114226-126114971	chr5	+	126114335	126114977	True	NM_005573,NM_001198557,NM_001202404	chr5,chr5,chr5	+,+,-	LMNB1,LMNB1,ALDH7A1	-2071,-1541,-183253
chr7:1024339-1024664	chr7	+	1024351	1024713	True	NM_017781,NM_001031617	chr7,chr7	+,-	CYP2W1,COX19	-1567,-9116
chr1:35658629-35659803	chr1	+	35658797	35659343	True	NM_005066,NM_005095	chr1,chr1	-,+	SFPQ,ZMYM4	-54,75224
chr22:36600288-36600529	chr22	+	36600391	36600577	True	NM_030643,NM_001136540,NM_145660	chr22,chr22,chr22	-,+,-	APOL4,APOL1,APOL4	352,48539,352
chr10:75909138-75910284	chr10	+	75909368	75910261	True	NM_001202450,NM_012095,NM_207012,NM_006721	chr10,chr10,chr10,chr10	+,-,-,+	ADK,AP3M1,AP3M1,ADK	681,615,615,681
chr1:28907103-28907635	chr1	+	28907242	28907664	True	NR_024127,NR_002987,NR_003077,NM_152304,NR_002976,NR_003035	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,-	SNHG12,SNORA61,SNORD99,RAB42,SNORA44,SNORA16A	752,-837,-1908,11047,-218,-41
chr7:16626432-16627261	chr7	+	16626736	16627239	True	NM_020319,NM_001159767	chr7,chr7	-,+	ANKMY2,BZW2	58264,58519
chr17:15366926-15367279	chr17	+	15367018	15367324	True	NM_001204477,NM_001130842	chr17,chr17	-,+	CDRT4,ZNF286A	3651,235566
chr19:55954540-55955590	chr19	+	55954545	55955495	True	NM_033113,NM_001145176	chr19,chr19	+,-	ZNF628,SHISA7	32203,-315
chr10:127516507-127516899	chr10	+	127516567	127516915	True	NM_000375,NM_016567,NM_078468,NM_078469	chr10,chr10,chr10,chr10	-,+,+,+	UROS,BCCIP,BCCIP,BCCIP	-4730,-4527,-4527,-4527
chr5:131822962-131823636	chr5	+	131823083	131823665	True	NM_005732,NM_002198	chr5,chr5	+,-	RAD50,IRF1	68950,2850
chr14:20808700-20810438	chr14	+	20808700	20810026	True	NM_001042618,NM_005484,NR_002312,NM_182849,NM_021178	chr14,chr14,chr14,chr14,chr14	+,+,-,-,-	PARP2,PARP2,RPPH1,CCNB1IP1,CCNB1IP1	1746,1746,1594,-7243,-7243
chr19:14638793-14639142	chr19	+	14638985	14639058	True	NR_038104,NR_030369,NM_138501,NM_006145,NR_038103	chr19,chr19,chr19,chr19,chr19	+,+,+,-,+	TECR,MIR639,TECR,DNAJB1,TECR	1320,1296,1320,-9784,1320
chr15:48011034-48011380	chr15	+	48011080	48011420	True	NM_016132,NM_024966,NM_153617,NM_153616,NM_153619,NM_153618,NM_020858	chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,+,+,+,+,+,+	MYEF2,SEMA6D,SEMA6D,SEMA6D,SEMA6D,SEMA6D,SEMA6D	459188,-445,-445,-445,-445,-445,-445
chr4:76946237-76947794	chr4	+	76946287	76947818	True	NM_005409,NM_001565,NM_001130017	chr4,chr4,chr4	-,-,+	CXCL11,CXCL10,ART3	9589,-1598,-14001
chr20:19261702-19262140	chr20	+	19261710	19262170	True	NR_024564,NM_020689	chr20,chr20	-,+	LOC100130264,SLC24A3	3120,-68471
chr1:10269843-10270141	chr1	+	10269894	10270186	True	NM_015074,NM_004401,NM_183416	chr1,chr1,chr1	+,-,+	KIF1B,DFFA,KIF1B	577,262477,577
chr5:125758845-125759136	chr5	+	125758893	125759131	True	NM_023927,NM_001182,NM_001146321,NM_001146320	chr5,chr5,chr5,chr5	+,-,+,+	GRAMD3,ALDH7A1,GRAMD3,GRAMD3	-81,172001,-81,-81
chr10:94058872-94059956	chr10	+	94058960	94059538	True	NM_017824,NM_014912	chr10,chr10	+,-	MARCH5,CPEB3	-8092,-8085
chr2:209149978-209151797	chr2	+	209150309	209151638	True	NM_015040,NM_005896	chr2,chr2	+,-	PIKFYVE,IDH1	-19377,-30503
chr17:40193110-40193444	chr17	+	40193178	40193444	True	NM_017595,NR_029431	chr17,chr17	+,-	NKIRAS2,DNAJC7	-21142,-23463
chr17:11146361-11147781	chr17	+	11146501	11147781	True	NM_001101387,NM_001173461,NM_001173462,NM_207386	chr17,chr17,chr17,chr17	-,+,+,+	PIRT,SHISA6,SHISA6,SHISA6	-405083,-1812,-1812,-1812
chr13:99851577-99852385	chr13	+	99851719	99852359	True	NM_177967,NR_026644,NR_036532,NR_036531,NM_001144072	chr13,chr13,chr13,chr13,chr13	+,+,-,-,+	UBAC2,UBAC2,LOC100289373,LOC100289373,UBAC2	803,803,707,709,319
chr13:52733815-52734789	chr13	+	52733833	52734173	True	NM_001146099,NM_152720,NR_027415,NM_002498,NM_021645	chr13,chr13,chr13,chr13,chr13	-,-,-,-,+	NEK3,NEK3,NEK3,NEK3,UTP14C	-3,-163,-3,-3,-135057
chr19:33167740-33168051	chr19	+	33167840	33168100	True	NM_207391,NM_032139	chr19,chr19	+,-	RGS9BP,ANKRD27	-1578,-1738
chr19:39136588-39137665	chr19	+	39136705	39136898	True	NM_004924,NM_007181	chr19,chr19	+,-	ACTN4,MAP4K1	1368,-28062
chr1:38409543-38410446	chr1	+	38409722	38410020	True	NM_005540,NM_016037	chr1,chr1	-,+	INPP5B,UTP11L	2759,68363
chrX:71935250-71935480	chrX	+	71935410	71935474	True	NM_002637,NM_001122670,NM_001080851,NM_001172436	chrX,chrX,chrX,chrX	-,-,+,-	PHKA1,PHKA1,DMRTC1B,PHKA1	-1381,-1381,129401,-1381
chr16:67527502-67527887	chr16	+	67527594	67527690	True	NM_001138,NM_024519	chr16,chr16	-,+	AGRP,FAM65A	-9878,35026
chr19:11457535-11457921	chr19	+	11457575	11457913	True	NM_001170635,NM_001080503,NM_022737,NM_198536,NM_001145416,NM_033408,NM_004283	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,-,-,-,-	LPPR2,CCDC159,LPPR2,TMEM205,TMEM205,TMEM205,RAB3D	8148,-455,8148,-594,-594,-594,-7231
chr14:62233074-62234272	chr14	+	62233124	62234074	True	NM_001017970,NM_003082	chr14,chr14	-,+	TMEM30B,SNAPC1	-484594,-4100
chr7:14031182-14031409	chr7	+	14031219	14031454	True	NM_001163150,NM_004956,NM_001163151,NM_001163147,NM_005738,NM_001163152,NM_001163148,NM_001163149	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,+,-,-,-	ETV1,ETV1,ETV1,ETV1,ARL4A,ETV1,ETV1,ETV1	-5080,-1577,-5080,-1577,-1304361,-5080,-169,-354
chr1:155164017-155164582	chr1	+	155164208	155164472	True	NM_001204287,NM_001204286,NM_001204285,NM_001204297,NM_001204290,NM_001204291,NM_001204292,NM_001204293,NM_002456,NM_001204296,NR_030281,NM_001204288,NM_001044393,NM_001044392,NM_001044391,NM_001044390,NM_001204289,NM_001018017,NM_001018016,NM_001204295,NM_001204294	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,-,-,-,-,-,+,-,-,-,-,-,-,-,-,-,-	MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MIR92B,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1	-1502,-1502,-1502,-1502,-1502,-1502,-1502,-1502,-1502,-1502,495,-1502,-1502,-1502,-1502,-1502,-1502,-1502,-1502,-1502,-1502
chr2:122407256-122407673	chr2	+	122407364	122407706	True	NM_015282,NR_037858,NM_001142274,NR_037857,NR_037856,NM_001142273	chr2,chr2,chr2,chr2,chr2,chr2	-,+,-,+,+,-	CLASP1,LOC254128,CLASP1,LOC254128,LOC254128,CLASP1	-312,-186,-312,-186,54,-312
chr2:96258947-96260178	chr2	+	96258949	96259978	True	NM_001164464,NM_138800	chr2,chr2	-,+	TRIM43B,TRIM43	-108470,-1234
chr2:96258947-96260178	chr2	-	96148255	96149288	False	NM_001164464,NM_016044	chr2,chr2	-,+	TRIM43B,FAHD2A	1241,-79859
chr4:26590819-26592703	chr4	+	26590933	26591991	True	NM_018317,NM_000730	chr4,chr4	+,-	TBC1D19,CCKAR	-5446,-98891
chr5:173174841-173176056	chr5	+	173174937	173176063	True	NM_030627,NM_138369	chr5,chr5	+,-	CPEB4,BOD1	139267,-131271
chr17:8301695-8303252	chr17	+	8301694	8303285	True	NM_001146684,NM_001025579	chr17,chr17	-,+	RNF222,NDEL1	-550,35893
chr18:32870472-32871880	chr18	+	32870477	32871895	True	NM_001112734,NR_024565,NM_001166012,NR_024566	chr18,chr18,chr18,chr18	-,+,-,+	ZSCAN30,ZNF271,ZSCAN30,ZNF271	-281,-292,-281,-292
chr3:149701141-149701652	chr3	+	149701149	149701663	True	NM_053024,NR_036538	chr3,chr3	-,+	PFN2,LOC646903	-12408,-12135
chr15:53090467-53090764	chr15	+	53090471	53090720	True	NM_004498,NM_002748	chr15,chr15	-,+	ONECUT1,MAPK6	-8262,-779111
chr12:10334086-10334342	chr12	+	10334223	10334350	True	NM_153022,NM_001172632,NM_001172633,NM_002543	chr12,chr12,chr12,chr12	+,-,-,-	C12orf59,OLR1,OLR1,OLR1	-2717,-9433,-9433,-9433
chr6:89672504-89673015	chr6	+	89672733	89672965	True	NM_006813,NM_003800	chr6,chr6	+,-	PNRC1,RNGTT	117463,433
chr5:76375358-76376346	chr5	+	76375470	76376366	True	NR_003014,NM_032367,NR_024398	chr5,chr5,chr5	-,-,+	SNORA47,ZBED3,LOC728723	80,6714,6256
chr10:95244080-95244678	chr10	+	95244208	95244584	True	NM_001127182,NM_013451,NM_133337	chr10,chr10,chr10	+,-,-	CEP55,MYOF,MYOF	11784,-2134,-2134
chr3:195385817-195387529	chr3	+	195385892	195387102	True	NM_001647,NR_003265	chr3,chr3	-,+	APOD,SDHAP2	-74816,-1036
chr3:195385817-195387529	chr3	-	195715458	195715944	False	NR_034088,NR_003264	chr3,chr3	+,-	LOC401109,SDHAP1	153562,1256
chr3:195385817-195387529	chr3	-	197352765	197353533	False	NR_003266,NM_001011537	chr3,chr3	-,+	LOC220729,FYTTD1	1269,122890
chrX:40438240-40439836	chrX	+	40438580	40439800	True	NM_005765,NM_144970	chrX,chrX	+,-	ATP6AP2,CXorf38	415,67069
chr3:128719631-128719941	chr3	+	128719672	128719926	True	NM_020741,NM_024768	chr3,chr3	-,+	KIAA1257,CCDC48	-6686,545
chr19:55998974-55999358	chr19	+	55999258	55999396	True	NM_024710,NM_001144950,NM_020378,NM_001195267	chr19,chr19,chr19,chr19	-,+,+,+	ISOC2,SSC5D,NAT14,SSC5D	-26209,473,-2752,473
chr15:67813571-67813796	chr15	+	67813730	67813840	True	NM_001143936,NM_024666	chr15,chr15	+,-	C15orf61,AAGAB	-259,-266656
chr17:25669137-25669667	chr17	+	25669277	25669496	True	NM_000625,NM_134265	chr17,chr17	-,+	NOS2,WSB1	458120,-48222
chr7:117501486-117502986	chr7	+	117501520	117503001	True	NM_033427,NM_016200	chr7,chr7	-,+	CTTNBP2,NAA38	10617,321084
chr12:128900702-128901601	chr12	+	128900754	128901621	True	NM_145648,NR_037406	chr12,chr12	-,+	SLC15A4,MIR3612	406970,-122168
chr4:187076275-187077188	chr4	+	187076640	187077226	True	NM_001006655,NM_021069	chr4,chr4	+,-	FAM149A,SORBS2	-6368,-198770
chr18:12254990-12255295	chr18	+	12255082	12255294	True	NR_036468,NM_006796,NM_001279	chr18,chr18,chr18	+,-,+	CIDEA,AFG3L2,CIDEA	-775,122031,-817
chr1:224372988-224374135	chr1	+	224373148	224374138	True	NM_003676,NR_031574	chr1,chr1	+,-	DEGS1,MIR320B2	-2278,70755
chr1:246585399-246586320	chr1	+	246585406	246586322	True	NM_001139459,NM_022743	chr1,chr1	+,-	CNST,SMYD3	143316,-4692
chr12:7024119-7024358	chr12	+	7024118	7024380	True	NM_032641,NM_001007026,NM_001975	chr12,chr12,chr12	-,+,+	SPSB2,ATN1,ENO2	-41597,9245,-555
chr1:23887048-23888901	chr1	+	23887307	23888577	True	NM_002167,NR_027042	chr1,chr1	-,+	ID3,MDS2	-985,65246
chr19:41084247-41084690	chr19	+	41084246	41084594	True	NM_138392,NM_004756	chr19,chr19	+,-	SHKBP1,NUMBL	-1540,112012
chr8:103878282-103878680	chr8	+	103878487	103878629	True	NM_015878,NM_148174,NM_001695	chr8,chr8,chr8	-,-,+	AZIN1,AZIN1,ATP6V1C1	-2090,-2090,154618
chr1:114447249-114447487	chr1	+	114447253	114447491	True	NM_022836,NM_006594	chr1,chr1	+,-	DCLRE1B,AP4B1	423,300
chr8:11035111-11035583	chr8	+	11035123	11035551	True	NM_173683,NM_015458	chr8,chr8	-,+	XKR6,MTMR9	23374,106448
chr17:3374573-3375203	chr17	+	3374661	3375251	True	NM_001170696,NM_001170697,NM_001170695,NM_001170698,NM_001170699,NM_000049,NM_032598,NM_001128085	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,+,-,+	SPATA22,SPATA22,SPATA22,SPATA22,SPATA22,ASPA,SPATA22,ASPA	49,33,49,6,-26,4044,-52,2152
chr6:43482076-43483023	chr6	+	43482091	43483069	True	NM_004875,NM_001012974,NM_203290,NM_015388	chr6,chr6,chr6,chr6	+,-,+,-	POLR1C,C6orf154,POLR1C,YIPF3	1721,-3667,1707,1709
chr21:45627416-45627653	chr21	+	45627548	45627614	True	NM_198155,NM_015259	chr21,chr21	+,-	C21orf33,ICOSLG	-74105,33270
chr20:17681865-17682966	chr20	+	17681931	17682899	True	NM_001014977,NM_001159495,NM_004587,NM_178477	chr20,chr20,chr20,chr20	+,+,-,+	BANF2,BANF2,RRBP1,BANF2	-1389,-7662,-19003,-1389
chr19:12946091-12946295	chr19	+	12946147	12946343	True	NM_001080997,NM_014975,NM_031429	chr19,chr19,chr19	-,+,-	RTBDN,MAST1,RTBDN	-4940,2915,31
chr11:64692865-64693101	chr11	+	64692895	64693143	True	NM_015104,NM_006244	chr11,chr11	-,+	ATG2A,PPP2R5B	-8173,-805
chr19:40465283-40466744	chr19	+	40465380	40466799	True	NM_003890,NM_006503	chr19,chr19	-,+	FCGBP,PSMC4	-24847,10273
chr13:46278863-46279534	chr13	+	46278913	46279522	True	NM_182542,NM_152719	chr13,chr13	-,+	FAM194B,SPERT	-89039,-2518
chr12:99526220-99527508	chr12	+	99526277	99527535	True	NM_181869,NM_020140	chr12,chr12	+,-	APAF1,ANKS1B	-487257,21092
chr8:124413274-124413871	chr8	+	124413421	124413699	True	NM_018024,NM_014109	chr8,chr8	+,-	WDYHV1,ATAD2	15265,-4716
chr6:42186177-42186838	chr6	+	42186176	42186547	True	NM_000409,NM_018141	chr6,chr6	+,-	GUCA1A,MRPS10	-63090,-543
chr1:150042575-150044449	chr1	+	150043407	150044393	True	NM_007259,NM_020205	chr1,chr1	+,-	VPS45,OTUD7B	-4129,-60721
chr3:14217791-14218191	chr3	+	14217813	14218241	True	NM_004628,NM_001145769,NR_027299,NM_014463	chr3,chr3,chr3,chr3	-,-,-,+	XPC,XPC,XPC,LSM3	1987,1987,1987,1986
chr8:135604475-135605332	chr8	+	135604514	135605223	True	NR_002438,NM_001029939	chr8,chr8	+,-	ZFAT-AS1,ZFAT	5090,103628
chr19:509274-509882	chr19	+	509305	509851	True	NM_033513,NM_182577	chr19,chr19	+,-	C19orf20,ODF3L2	-1859,-34322
chr11:122750647-122751839	chr11	+	122750727	122751593	True	NM_024806,NM_001098169,NM_199124	chr11,chr11,chr11	+,-,+	C11orf63,BSX,C11orf63	1879,100836,1879
chr3:142374629-142376019	chr3	+	142374652	142376045	True	NM_001184,NM_001172312	chr3,chr3	-,+	ATR,PLS1	-76984,-27
chr17:7239158-7239374	chr17	+	7239179	7239247	True	NM_001005408,NM_032442,NM_014716	chr17,chr17,chr17	-,-,+	NEURL4,NEURL4,ACAP1	-6541,-6541,600
chr19:36210153-36210353	chr19	+	36210165	36210340	True	NM_014727,NM_024660,NM_014383	chr19,chr19,chr19	+,-,+	MLL4,IGFLR1,ZBTB32	-1295,23061,-6386
chr3:119514443-119515898	chr3	+	119514667	119515851	True	NM_005694,NM_022002	chr3,chr3	-,+	COX17,NR1I2	-118424,-13161
chr2:242672968-242673264	chr2	+	242672973	242673159	True	NM_152783,NR_033255	chr2,chr2	+,-	D2HGDH,DTYMK	870,-46590
chr19:2820821-2821364	chr19	+	2820948	2821412	True	NM_003021,NM_001102651	chr19,chr19	-,+	SGTA,ZNF554	-37594,-1127
chr5:140255774-140256464	chr5	+	140255816	140256194	True	NM_031865,NM_031864,NM_031861,NM_002109,NM_018903,NM_018902,NM_018904	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,-,+,+,+	PCDHA13,PCDHA12,PCDHA11,HARS,PCDHA12,PCDHA11,PCDHA13	5659,-937,-8037,-184845,-937,-8037,5659
chr11:66138252-66138713	chr11	+	66138376	66138746	True	NM_001532,NM_178864	chr11,chr11	-,+	SLC29A2,NPAS4	595,49728
chr2:37419542-37420527	chr2	+	37419754	37420252	True	NR_037880,NR_037879,NM_001032377	chr2,chr2,chr2	+,+,-	LOC100505876,LOC100505876,SULT6B1	3382,3382,-4064
chr3:105590419-105590801	chr3	+	105590521	105590828	True	NM_170662,NM_001627	chr3,chr3	-,+	CBLB,ALCAM	-2634,-504860
chr13:44949828-44950626	chr13	+	44949892	44950634	True	NM_001010897,NM_006022	chr13,chr13	+,-	SERP2,TSC22D1	-1972,60395
chr5:80691200-80692598	chr5	+	80691234	80692497	True	NM_032280,NM_130767	chr5,chr5	+,-	ZCCHC9,ACOT12	-93886,-1246
chr7:111845645-111845901	chr7	+	111845644	111845896	True	NM_021994,NM_014705	chr7,chr7	+,-	ZNF277,DOCK4	746,616
chr11:2468330-2469052	chr11	+	2468426	2469096	True	NM_000218,NM_014555	chr11,chr11	+,-	KCNQ1,TRPM5	-2256,-24151
chr22:23923460-23924257	chr22	+	23923488	23923752	True	NM_153615,NM_152855,NM_020070	chr22,chr22,chr22	+,-,-	RGL4,IGLL1,IGLL1	109295,-993,-993
chr5:172074970-172076455	chr5	+	172075257	172076285	True	NM_001142651,NM_004417	chr5,chr5	+,-	NEURL1B,DUSP1	-7032,121968
chr3:107272995-107273769	chr3	+	107273004	107273536	True	NM_020235,NR_028303	chr3,chr3	+,-	BBX,LOC100302640	-31274,-313519
chr3:122135503-122137055	chr3	+	122135537	122136982	True	NM_014367,NM_019069	chr3,chr3	+,-	FAM162A,WDR5B	-32568,-655
chr19:50527533-50528383	chr19	+	50527602	50528277	True	NM_001025778,NM_001006656,NM_016440,NM_015428	chr19,chr19,chr19,chr19	-,+,-,+	VRK3,ZNF473,VRK3,ZNF473	578,934,578,934
chr1:155903368-155903960	chr1	+	155903380	155903909	True	NM_014949,NM_181885,NR_003005	chr1,chr1,chr1	-,+,-	KIAA0907,RXFP4,SCARNA4	329,7570,-7503
chr8:117783973-117785057	chr8	+	117784017	117785051	True	NM_003756,NM_032334	chr8,chr8	-,+	EIF3H,UTP23	-15955,-5334
chr16:4988125-4988942	chr16	+	4988294	4988862	True	NM_014692,NM_002705	chr16,chr16	+,-	SEC14L5,PPL	19455,-1158
chr20:62671000-62672974	chr20	+	62671099	62672623	True	NR_027687,NR_027686,NM_018419	chr20,chr20,chr20	+,+,-	NCRNA00176,NCRNA00176,SOX18	-5453,-5453,8406
chr10:21783115-21783783	chr10	+	21783118	21783591	True	NM_001010911,NM_001195627,NR_031736	chr10,chr10,chr10	-,+,-	C10orf114,MLLT10,MIR1915	2672,39509,2029
chr20:23031454-23031682	chr20	+	23031579	23031721	True	NM_001052,NM_000361	chr20,chr20	+,-	SSTR4,THBD	-15573,-1278
chr14:68183523-68185258	chr14	+	68184113	68185304	True	NM_016026,NM_152443	chr14,chr14	-,+	RDH11,RDH12	-21603,-15562
chr20:62170136-62170687	chr20	+	62170144	62170570	True	NM_005975,NM_024059,NM_080823	chr20,chr20,chr20	-,+,-	PTK6,C20orf195,SRMS	-1437,13802,8337
chr5:175673103-175673532	chr5	+	175673317	175673410	True	NR_036494,NM_198567	chr5,chr5	-,+	LOC643201,C5orf25	-47019,-8007
chr5:175673103-175673532	chr5	-	177091235	177091325	False	NR_026921,NM_007255	chr5,chr5	-,+	LOC202181,B4GALT7	8012,-64177
chr12:49740489-49740763	chr12	+	49740537	49740777	True	NM_001008223,NM_024902	chr12,chr12	-,+	C1QL4,DNAJC22	-9566,263
chr19:4471594-4472142	chr19	+	4471653	4472091	True	NM_025241,NM_032631,NM_001001520	chr19,chr19,chr19	-,+,+	UBXN6,HDGFRP2,HDGFRP2	-13862,163,163
chr2:120128321-120128523	chr2	+	120128327	120128574	True	NM_001079863,NM_001178017,NM_020548,NM_001079862,NM_001178043,NM_001178042,NM_001178041,NM_001017927	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,+,+,+,-	DBI,DBI,DBI,DBI,DBI,DBI,DBI,C2orf76	-3127,-3549,-3825,-3874,-3825,-3825,-3825,-4069
chr18:21019674-21020642	chr18	+	21019901	21020603	True	NM_003831,NM_032933	chr18,chr18	+,-	RIOK3,C18orf45	12183,-1976
chr19:49175267-49176467	chr19	+	49175271	49176223	True	NM_000511,NM_145807	chr19,chr19	+,-	FUT2,NTN5	23004,91
chr7:150066463-150066853	chr7	+	150066492	150066898	True	NM_002889,NM_173680,NM_013400,NM_014374,NM_001099695,NM_001099696	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,+,+	RARRES2,ZNF775,REPIN1,REPIN1,REPIN1,REPIN1	-27729,9507,-664,1359,-664,-664
chr3:121378094-121378463	chr3	+	121378134	121378510	True	NM_005335,NM_016298	chr3,chr3	-,+	HCLS1,FBXO40	1331,-66016
chr4:55094417-55095146	chr4	+	55094659	55095157	True	NM_012110,NM_006206	chr4,chr4	-,+	CHIC2,PDGFRA	-163871,106
chr3:52260371-52260963	chr3	+	52260380	52261009	True	NM_017442,NM_144641	chr3,chr3	-,+	TLR9,PPM1M	-201,18799
chr11:62415037-62415352	chr11	+	62415215	62415309	True	NM_001043229,NM_030628,NM_198335,NM_198334	chr11,chr11,chr11,chr11	+,-,-,-	METTL12,INTS5,GANAB,GANAB	17469,5515,-1111,-1111
chr16:85647239-85647497	chr16	+	85647335	85647409	True	NM_001134473,NM_014615,NM_016095	chr16,chr16,chr16	+,+,-	KIAA0182,KIAA0182,GINS2	-2357,-462,75229
chr11:66406742-66407211	chr11	+	66406748	66407136	True	NM_002896,NM_001198844,NM_031492,NM_001198843	chr11,chr11,chr11,chr11	+,+,-,+	RBM4,RBM4,RBM4B,RBM4	-712,-712,38189,-712
chr4:126237419-126237668	chr4	+	126237432	126237656	True	NM_024582,NM_001167882	chr4,chr4	+,-	FAT4,ANKRD50	-18,-603545
chr1:115213930-115215830	chr1	+	115214403	115215847	True	NM_003176,NM_198459	chr1,chr1	+,-	SYCP1,DENND2C	181607,-1671
chr8:55014845-55015295	chr8	+	55014863	55015277	True	NM_014175,NM_006330	chr8,chr8	+,-	MRPL15,LYPLA1	32503,-286
chrX:49020256-49021117	chrX	+	49020434	49021082	True	NM_002668,NM_006150,NM_001099682,NM_001099681,NM_001099680,NM_024859	chrX,chrX,chrX,chrX,chrX,chrX	+,-,+,+,+,+	PLP2,PRICKLE3,MAGIX,MAGIX,MAGIX,MAGIX	7101,21744,-1304,-1304,-215,-1304
chr12:27863041-27863754	chr12	+	27863174	27863670	True	NM_021821,NM_001146221,NM_001190864	chr12,chr12,chr12	+,-,+	MRPS35,LOC100287284,MRPS35	35,60589,35
chr19:4183270-4183573	chr19	+	4183269	4183497	True	NM_016539,NM_133475,NM_001193285	chr19,chr19,chr19	-,+,-	SIRT6,ANKRD24,SIRT6	-673,23,-673
chr19:4008164-4008485	chr19	+	4008308	4008368	True	NM_015897,NM_001961	chr19,chr19	+,-	PIAS4,EEF2	-610,-22847
chr19:12075421-12075725	chr19	+	12075579	12075703	True	NM_001080411,NM_001012753	chr19,chr19	-,+	ZNF433,ZNF763	70872,165
chr19:44642391-44644292	chr19	+	44642620	44644220	True	NM_001144824,NM_006630,NR_033341	chr19,chr19,chr19	+,+,-	ZNF234,ZNF234,LOC100379224	1489,1489,-25284
chrX:152734944-152735789	chrX	+	152735104	152735664	True	NM_017518,NM_001711	chrX,chrX	-,+	HAUS7,BGN	989,24682
chr3:183963509-183964555	chr3	+	183963526	183964337	True	NM_005787,NM_001006941,NR_030410,NM_032331,NM_014693,NR_024534,NR_024533	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,+,+,+,-,-	ALG3,ALG3,MIR1224,ECE2,ECE2,ALG3,ALG3	2481,3035,-4384,3107,3107,2481,2481
chr11:27742452-27743471	chr11	+	27742685	27743302	True	NM_170731,NR_033315,NM_170732,NM_001143805,NM_001143807,NM_001143806	chr11,chr11,chr11,chr11,chr11,chr11	-,+,-,-,-,-	BDNF,BDNF-AS1,BDNF,BDNF,BDNF,BDNF	360,-214337,-359,-359,-1391,-359
chr14:24421983-24422790	chr14	+	24422343	24422805	True	NR_023924,NR_023922,NR_023923,NM_021004,NR_023921	chr14,chr14,chr14,chr14,chr14	-,-,-,+,-	C14orf167,C14orf167,C14orf167,DHRS4,C14orf167	637,1543,637,159,637
chr5:130502352-130503546	chr5	+	130502396	130503310	True	NM_181705,NR_024611,NR_024610,NM_005340	chr5,chr5,chr5,chr5	+,-,-,-	LYRM7,HINT1,HINT1,HINT1	3330,-1370,-1362,-1362
chr20:2822694-2823932	chr20	+	2822693	2823811	True	NM_080413,NM_022575,NM_022760	chr20,chr20,chr20	+,+,-	VPS16,VPS16,FAM113A	-1374,-1374,-1361
chr17:28815341-28815714	chr17	+	28815496	28815558	True	NM_206832,NM_004871	chr17,chr17	-,+	TMIGD1,GOSR1	-154431,-11124
chr3:27413560-27414102	chr3	+	27413885	27414127	True	NM_052953,NM_199347	chr3,chr3	+,-	LRRC3B,NEK10	-749636,-2973
chr10:88512239-88513958	chr10	+	88512415	88513907	True	NM_024756,NM_004329	chr10,chr10	-,+	MMRN2,BMPR1A	203572,2488
chr14:77434103-77434993	chr14	+	77434306	77434960	True	NM_024496,NM_033426	chr14,chr14	-,+	IRF2BPL,KIAA1737	60124,129617
chr11:325567-325829	chr11	+	325648	325866	True	NM_021034,NM_003641	chr11,chr11	-,+	IFITM3,IFITM1	-4734,-11723
chr11:56060373-56060696	chr11	+	56060547	56060697	True	NM_001004745,NM_001005199	chr11,chr11	+,-	OR5T1,OR8H1	-17499,-2009
chr17:43482383-43483073	chr17_ctg5_hap1	+	97615	98257	False	NM_001159330,NM_001113738	chr17_ctg5_hap1,chr17_ctg5_hap1	-,+	ARHGAP27,ARL17A	378,97463
chr17:43482383-43483073	chr17	+	43482479	43483121	True	NM_001159330,NR_024435	chr17,chr17	-,+	ARHGAP27,LOC100133991	378,-142972
chrY:25423917-25425865	chrY	+	25425543	25425890	True	NM_020420,NM_020363	chrY,chrY	-,+	DAZ4,DAZ2	-80289,-59998
chrY:25423917-25425865	chrY	-	25287113	25287460	False	NM_020364,NM_004081	chrY,chrY	+,-	DAZ3,DAZ1	78120,57837
chrY:25423917-25425865	chrY	-	26920837	26921184	False	NM_020364,NM_001005375	chrY,chrY	-,+	DAZ3,DAZ4	38513,58782
chrY:25423917-25425865	chrY	+	27041218	27041565	False	NM_020420,NM_001005786	chrY,chrY	-,+	DAZ4,DAZ2	-81579,-61287
chr1:151161598-151161822	chr1	+	151161611	151161847	True	NM_001135637,NM_001135636,NM_003557,NM_005997,NM_001135638	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	PIP5K1A,PIP5K1A,PIP5K1A,VPS72,PIP5K1A	9173,9173,9173,843,9173
chr3:47820596-47821909	chr3	+	47820604	47821240	True	NM_014966,NM_003074	chr3,chr3	+,-	DHX30,SMARCC1	23158,2215
chr1:199993756-199994781	chr1	+	199994185	199994592	True	NM_205860,NM_012482,NM_003822	chr1,chr1,chr1	+,-,+	NR5A2,ZNF281,NR5A2	2177,384627,2177
chr5:175875949-175876430	chr5	+	175876017	175876247	True	NM_014613,NM_007097	chr5,chr5	+,-	FAF2,CLTB	-721,-32477
chr11:75424449-75425411	chr11	+	75424456	75425453	True	NM_025098,NM_207577	chr11,chr11	+,-	MOGAT2,MAP6	3480,-44977
chr12:57388388-57389241	chr12	+	57388480	57389228	True	NM_007264,NM_014830	chr12,chr12	+,-	GPR182,ZBTB39	-176,11119
chr1:20512062-20512308	chr1	+	20512077	20512291	True	NM_001105572,NM_152376	chr1,chr1	-,+	PLA2G2C,UBXN10	-10390,286
chr15:73925744-73925980	chr15	+	73925763	73926027	True	NM_017455,NM_001161363,NM_001161364,NM_012428,NM_001024736	chr15,chr15,chr15,chr15,chr15	-,-,-,-,+	NPTN,NPTN,NPTN,NPTN,CD276	-10,-10,-10,-10,50594
chr11:32851936-32853287	chr11	+	32851951	32853224	True	NM_001008391,NM_024081	chr11,chr11	-,+	CCDC73,PRRG4	-35764,-514
chr5:134239859-134240164	chr5	+	134240051	134240205	True	NM_032151,NM_002653	chr5,chr5	+,-	PCBD2,PITX1	604,129809
chr1:213020324-213020773	chr1	+	213020551	213020762	True	NM_001024601,NM_014053	chr1,chr1	-,+	C1orf227,FLVCR1	290,10834
chr14:51705972-51707020	chr14	+	51706262	51706848	True	NM_052978,NM_030755	chr14,chr14	-,+	TRIM9,TMX1	-143840,37
chr16:71560897-71561245	chr16	+	71560950	71561108	True	NM_001166395,NM_005769,NM_006961	chr16,chr16,chr16	+,+,-	CHST4,CHST4,ZNF19	-859,-990,-37696
chr17:16694756-16695853	chr17	+	16695358	16695720	True	NR_026810,NR_029392,NR_003190	chr17,chr17,chr17	+,-,+	FAM106C,KRT16P2,LOC162632	-3352,40477,-5203
chr17:16694756-16695853	chr17	+	20323909	20323959	False	NR_023380,NM_001042685	chr17,chr17	+,-	CCDC144C,LGALS9B	-99473,46939
chr16:7383056-7384352	chr16	+	7383216	7384368	True	NM_001146336,NM_145891,NM_145892,NM_145893	chr16,chr16,chr16,chr16	-,+,+,+	TMEM114,RBFOX1,RBFOX1,RBFOX1	1237908,-523,-523,-523
chr9:73028851-73029148	chr9	+	73028853	73029049	True	NM_001206,NM_015110	chr9,chr9	-,+	KLF9,SMC5	574,-155026
chr4:158016917-158018892	chr4	+	158017001	158018744	True	NR_036641,NM_001166060	chr4,chr4	-,+	PDGFC,GLRB	-124455,-19497
chr5:180650663-180650916	chr5	+	180650733	180650841	True	NR_002592,NM_033549,NM_201627	chr5,chr5,chr5	-,+,+	SNORD96A,TRIM41,TRIM41	18098,-478,-478
chr3:52490311-52490548	chr3	+	52490350	52490580	True	NM_003280,NM_007184	chr3,chr3	-,+	TNNC1,NISCH	-2293,-877
chr1:247840414-247841126	chr1	+	247840683	247841134	True	NM_001001914,NM_001005487	chr1,chr1	+,-	OR2G3,OR13G1	-71846,-4340
chr11:71951987-71952302	chr11	+	71952080	71952308	True	NM_005169,NM_001567	chr11,chr11	-,+	PHOX2A,INPPL1	2962,-16249
chr3:9958314-9958570	chr3	+	9958412	9958518	True	NR_037807,NM_032732,NM_207351,NM_153460,NM_153461,NM_001203263,NM_001203264,NM_001203265	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,-,+,+,+,+,+	IL17RC,IL17RC,PRRT3,IL17RC,IL17RC,IL17RC,IL17RC,IL17RC	239,239,35610,239,263,239,239,239
chr7:84706344-84707712	chr7	+	84706517	84707752	True	NM_000840,NM_152754	chr7,chr7	+,-	GRM3,SEMA3D	1565477,43546
chr1:179106382-179107026	chr1	+	179106416	179107074	True	NM_022371,NM_001168239,NM_001136000,NM_005158	chr1,chr1,chr1,chr1	+,-,-,-	TOR3A,ABL2,ABL2,ABL2	-55365,5201,5201,5201
chr14:105453687-105454113	chr14	+	105453728	105453874	True	NM_174891,NM_138420	chr14,chr14	+,-	C14orf79,AHNAK2	-1163,-9034
chr6:105622964-105623571	chr6	+	105623049	105623119	True	NR_037157,NM_022361,NR_024539	chr6,chr6,chr6	+,-,-	C6orf112,POPDC3,POPDC3	-37547,4799,1071
chr3:42814721-42815686	chr3	+	42814748	42815129	True	NM_001296,NM_144719	chr3,chr3	+,-	CCBP2,CCDC13	35834,-3
chr3:140395896-140397048	chr3	+	140395895	140396975	True	NM_178177,NM_152616	chr3,chr3	-,+	NMNAT3,TRIM42	-999010,4
chr14:92336149-92336672	chr14	+	92336196	92336673	True	NM_001128596,NM_017437	chr14,chr14	-,+	TC2N,CPSF2	-2316,251624
chr4:105416066-105416424	chr4	+	105416250	105416406	True	NM_025212,NM_017628	chr4,chr4	-,+	CXXC4,TET2	-3783,650625
chr1:36791334-36791923	chr1	+	36791502	36791828	True	NM_024676,NM_018166	chr1,chr1	+,-	SH3D21,FAM176B	-18858,-1747
chr11:133903978-133904183	chr11	+	133903983	133904165	True	NM_014987,NR_027276	chr11,chr11	-,+	IGSF9B,LOC100128239	-77103,-1867
chr17:45907230-45908030	chr17	+	45907397	45907847	True	NM_145798,NM_145255,NR_037575,NM_033413,NM_148887	chr17,chr17,chr17,chr17,chr17	-,-,-,+,-	OSBPL7,MRPL10,MRPL10,LRRC46,MRPL10	-8250,1110,1110,1145,1110
chr7:143599053-143599349	chr7	+	143599061	143599281	True	NM_014719,NM_001004685	chr7,chr7	-,+	FAM115A,OR2F2	17,33044
chr17:15634509-15635073	chr17	+	15634538	15635086	True	NM_006470,NM_178571	chr17,chr17	-,+	TRIM16,TBC1D26	-48345,504
chr17:15634509-15635073	chr17	-	18548246	18548763	False	NM_001037330,NM_001039397	chr17,chr17	+,-	TRIM16L,TBC1D28	76638,-506
chr8:76287788-76288199	chr8	+	76287815	76288017	True	NM_004133,NM_020647	chr8,chr8	+,-	HNF4G,JPH1	164185,-1054253
chr16:28929653-28931145	chr16	+	28930361	28931076	True	NM_024816,NM_001178098	chr16,chr16	-,+	RABEP2,CD19	5506,12183
chr11:831198-831702	chr11	+	831212	831576	True	NM_001039490,NM_021128,NM_173584,NM_139030,NM_004357,NM_139029	chr11,chr11,chr11,chr11,chr11,chr11	+,-,+,+,+,+	CD151,POLR2L,EFCAB4A,CD151,CD151,CD151	1375,11003,-3678,1375,1375,1375
chr5:110409254-110409465	chr5	+	110409265	110409508	True	NM_001039763,NM_033035,NR_033425	chr5,chr5,chr5	-,+,+	TMEM232,TSLP,TSLP	-346815,-1926,-304
chr19:12001050-12002096	chr19	+	12001595	12001998	True	NM_021915,NM_001080411	chr19,chr19	+,-	ZNF69,ZNF433	-2983,144578
chr7:86627036-86627948	chr7	+	86627081	86627899	True	NM_152748,NM_001142326	chr7,chr7	-,+	KIAA1324L,DMTF1	-31790,153777
chr16:12008199-12008995	chr16	+	12008203	12008961	True	NM_001192,NM_002094,NM_001130007,NM_001130006	chr16,chr16,chr16,chr16	+,-,-,-	TNFRSF17,GSPT1,GSPT1,GSPT1	50002,914,1608,914
chr21:45140517-45141000	chr21	+	45140585	45140985	True	NM_003681,NM_000100	chr21,chr21	+,-	PDXK,CSTB	-1658,55324
chr1:170129963-170131085	chr1	+	170130034	170130782	True	NR_036065,NR_036064	chr1,chr1	+,-	MIR3119-2,MIR3119-1	-9567,-9431
chr9:131273405-131273706	chr9	+	131273623	131273691	True	NM_001003722,NM_001499,NR_029837	chr9,chr9,chr9	+,+,-	GLE1,GLE1,MIR219-2	-6705,-6705,-118630
chr19:3972600-3973077	chr19	+	3972668	3972728	True	NR_002602,NM_015897,NM_001348	chr19,chr19,chr19	-,+,-	SNORD37,PIAS4,DAPK3	9892,35020,-2842
chr3:116153693-116154855	chr3	+	116153809	116154777	True	NR_015391,NM_002338	chr3,chr3	+,-	NCRNA00295,LSAMP	273857,9659
chr18:7119667-7120607	chr18	+	7119823	7120171	True	NM_005559,NM_001105581	chr18,chr18	-,+	LAMA1,LRRC30	-2010,110965
chr1:205600704-205600919	chr1	+	205600780	205600956	True	NM_021795,NM_001973,NM_181644	chr1,chr1,chr1	-,-,+	ELK4,ELK4,MFSD4	1094,1094,-62719
chrY:26333581-26334502	chrY	+	26333590	26334526	True	NR_001526,NR_001554	chrY,chrY	+,-	TTTY17A,CSPG4P1Y	296952,-212
chrY:26333581-26334502	chrY	-	27627906	27628842	False	NR_002179,NR_001554	chrY,chrY	-,+	TTTY17C,CSPG4P1Y	-296986,212
chrX:53452696-53453653	chrX	+	53452880	53453648	True	NM_001037811,NM_006306,NM_001031745,NM_004493,NM_144968	chrX,chrX,chrX,chrX,chrX	-,-,+,-,+	HSD17B10,SMC1A,RIBC1,HSD17B10,RIBC1	7727,-3262,-3041,7727,-3092
chr14:75344461-75344876	chr16	+	26122917	26122972	True	NM_001012981,NM_006040	chr16,chr16	-,+	ZKSCAN2,HS3ST4	-854062,-419626
chr1:67218243-67218511	chr1	+	67218242	67218530	True	NM_005478,NM_152665	chr1,chr1	-,+	INSL5,TCTEX1D1	48462,-153
chr1:75117121-75117807	chr1	+	75117264	75117825	True	NM_001162916,NM_001002912	chr1,chr1	+,-	TYW3,C1orf173	81010,21658
chr8:135710936-135712120	chr8	+	135711037	135712099	True	NM_001167583,NM_001029939,NR_002438,NM_001174158	chr8,chr8,chr8,chr8	-,-,+,-	ZFAT,ZFAT,ZFAT-AS1,ZFAT	-2236,-2236,-100774,-2236
chr2:242495853-242496934	chr2	+	242496057	242496480	True	NM_032515,NR_033346	chr2,chr2	+,-	BOK,BOK-AS1	1711,2137
chr9:127215095-127215359	chr9	+	127215278	127215374	True	NM_002799,NM_001161808	chr9,chr9	-,+	PSMB7,GPR144	-37557,-1906
chr16:4523849-4524154	chr16	+	4524083	4524169	True	NM_020677,NM_002134,NM_001127204,NM_001127206	chr16,chr16,chr16,chr16	-,+,+,+	NMRAL1,HMOX2,HMOX2,HMOX2	777,2171,2171,549
chr1:52341388-52342714	chr1	+	52341551	52342501	True	NM_001101662,NM_148907,NM_002525	chr1,chr1,chr1	-,+,-	NRD1,OSBPL9,NRD1	2160,-146116,2160
chr12:49111896-49113128	chr12	+	49112010	49112638	True	NM_001240,NR_029448,NR_029449	chr12,chr12,chr12	-,+,+	CCNT1,LOC255411,LOC255411	-1229,8579,8579
chr6:166402291-166402578	chr6	+	166402290	166402360	True	NR_026860,NR_026861,NR_027284	chr6,chr6,chr6	-,-,+	C6orf176,C6orf176,LOC441177	-763,-763,-1302
chr17:36244073-36244712	chr17	+	36244318	36244716	True	NM_032258,NR_024178	chr17,chr17	+,-	TBC1D3F,LOC284100	39243,37
chr6:139602978-139603406	chr6	+	139602978	139603430	True	NM_153235,NM_016217	chr6,chr6	-,+	TXLNB,HECA	9828,-146789
chr6:139602978-139603406	chr6	+	139607309	139607663	False	NM_153235,NM_016217	chr6,chr6	-,+	TXLNB,HECA	5595,-151112
chr5:140729994-140730260	chr5	+	140729999	140730254	True	NM_032095,NM_018923,NM_018922,NM_032096,NM_005642,NM_032053,NM_032011,NM_018916,NM_018917	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,-,+,+,+,+	PCDHGB1,PCDHGB2,PCDHGB1,PCDHGB2,TAF7,PCDHGA4,PCDHGA3,PCDHGA3,PCDHGA4	-223,9448,-223,9448,-29648,4513,-6450,-6450,4513
chr12:129336826-129337437	chr12	+	129336827	129337328	True	NM_145648,NM_144669	chr12,chr12	-,+	SLC15A4,GLT1D1	-28286,752
chr22:39964911-39965544	chr22	+	39965115	39965492	True	NM_001003406,NM_194326,NM_021096	chr22,chr22,chr22	+,-,+	CACNA1I,RPS19BP1,CACNA1I	1265,-36255,1265
chr2:240985850-240986056	chr2	+	240985883	240985997	True	NR_037808,NM_173351,NM_001080835	chr2,chr2,chr2	+,-,-	LOC150935,OR6B3,PRR21	-301391,-394,-3484
chr19:8579205-8579606	chr19	+	8579209	8579303	True	NM_001146175,NM_032370,NM_031203	chr19,chr19,chr19	-,-,+	ZNF414,ZNF414,HNRNPM	-161,-161,-69457
chr19:33623309-33623547	chr19	+	33623308	33623542	True	NM_173479,NM_033103	chr19,chr19	+,-	WDR88,RHPN2	-361,-67484
chr22:22903069-22903706	chr22	+	22903273	22903727	True	NR_027426,NM_006115,NM_206953,NM_206955,NM_206954,NM_206956	chr22,chr22,chr22,chr22,chr22,chr22	+,-,-,-,-,-	LOC648691,PRAME,PRAME,PRAME,PRAME,PRAME	-1568,-1577,-1577,-1723,-1577,-1723
chr2:62429784-62430131	chr2	+	62429873	62430155	True	NM_198276,NM_006577	chr2,chr2	-,+	TMEM17,B3GNT2	303499,-6669
chr1:22959263-22960529	chr1	+	22959904	22960467	True	NM_172369,NM_015991,NR_036214,NM_001114101	chr1,chr1,chr1,chr1	+,+,-,+	C1QC,C1QA,MIR4253,C1QC	9650,2650,229309,9650
chr11:119236225-119236695	chr11	+	119236260	119236532	True	NM_171997,NR_034160	chr11,chr11	-,+	USP2,LOC100499227	-1368,15955
chr17:43696578-43696874	chr17	+	43696671	43696849	True	NR_026680,NR_026901,NR_037772,NR_027295	chr17,chr17,chr17,chr17	+,-,+,+	MGC57346,LOC644172,CRHR1,MGC57346	862,-16923,860,1131
chr17:43696578-43696874	chr17	-	44303667	44303719	False	NM_001193465,NR_034172	chr17,chr17	-,+	KIAA1267,LOC644246	-927,-32781
chr19:14140927-14141532	chr19	+	14140927	14141557	True	NM_004843,NM_002918,NM_080864	chr19,chr19,chr19	+,-,+	IL27RA,RFX1,RLN3	704,-23793,-1970
chr2:3622388-3622592	chr2	+	3622575	3622635	True	NM_001011,NM_002936	chr2,chr2	+,-	RPS7,RNASEH1	217,-16635
chr19:4534570-4534972	chr19	+	4534689	4534985	True	NM_052972,NM_032631,NM_001013706	chr19,chr19,chr19	-,+,-	LRG1,HDGFRP2,PLIN5	5101,-62485,273
chr16:30458113-30458426	chr16	+	30458308	30458425	True	NM_001114380,NM_012248	chr16,chr16	+,-	ITGAL,SEPHS2	25557,-1084
chr14:24659384-24659656	chr14	+	24659384	24659694	True	NM_024658,NM_006405,NM_001014842,NM_001184739	chr14,chr14,chr14,chr14	-,-,-,+	IPO4,TM9SF1,TM9SF1,TSSK4	-1260,5238,5238,15231
chr2:165697168-165697391	chr2	+	165697224	165697426	True	NM_001040142,NM_014900	chr2,chr2	+,-	SCN2A,COBLL1	398485,552
chr16:48263672-48263959	chr16	+	48263674	48263992	True	NM_145186,NM_033151,NM_032583,NM_031490	chr16,chr16,chr16,chr16	-,-,-,+	ABCC11,ABCC11,ABCC11,LONP2	5146,2240,5146,14218
chr6:153453032-153454283	chr6	+	153453066	153454295	True	NM_194435,NM_012419	chr6,chr6	+,-	VIP,RGS17	-381184,-677
chr4:9636765-9637275	chr4	+	9636783	9637321	True	NR_031688,NM_000798	chr4,chr4	-,+	MIR548I2,DRD5	-78846,145936
chr1:234743163-234743413	chr1	+	234743244	234743432	True	NR_033927,NM_001077397,NM_182972	chr1,chr1,chr1	+,-,-	NCRNA00184,IRF2BP2,IRF2BP2	21624,1889,1889
chr9:140168824-140169390	chr9	+	140169042	140169412	True	NM_001001710,NM_017723	chr9,chr9	-,+	FAM166A,C9orf167	-26820,2867
chr1:228600834-228602310	chr1	+	228600953	228602167	True	NM_001024940,NM_175055,NM_001134855,NM_145214,NM_016102	chr1,chr1,chr1,chr1,chr1	-,+,-,-,-	TRIM17,HIST3H2BB,TRIM17,TRIM11,TRIM17	2466,43640,2466,-6436,2466
chr4:121803393-121804723	chr4	+	121803622	121804652	True	NM_018699,NR_024365	chr4,chr4	-,+	PRDM5,LOC100192379	39423,881087
chr10:62149197-62149486	chr10	+	62149306	62149524	True	NM_001170406,NM_020987	chr10,chr10	+,-	CDK1,ANK3	388564,160
chr2:207327406-207328446	chr2	+	207327426	207328444	True	NM_005279,NM_003812	chr2,chr2	-,+	GPR1,ADAM23	-244655,-19109
chr16:71930144-71931568	chr16	+	71930181	71931573	True	NM_014761,NM_001201556	chr16,chr16	+,-	KIAA0174,ZNF821	-786,-12088
chr1:113461061-113461743	chr1	+	113461060	113461634	True	NR_002796,NM_001166496	chr1,chr1	+,-	AKR7A2P1,SLC16A1	4337,37109
chr9:87277718-87279196	chr9	+	87277980	87278864	True	NM_006180,NM_022127,NM_001007097,NM_001018064,NM_001018065,NM_001018066	chr9,chr9,chr9,chr9,chr9,chr9	+,-,+,+,+,+	NTRK2,SLC28A3,NTRK2,NTRK2,NTRK2,NTRK2	4601,-294567,5761,4601,5730,5730
chr10:30989534-30990515	chr10	+	30989684	30990552	True	NM_183058,NM_005204	chr10,chr10	-,+	LYZL2,MAP3K8	-71037,-266880
chr21:43786117-43786326	chr21	+	43786210	43786282	True	NM_003225,NM_001001895	chr21,chr21	-,+	TFF1,UBASH3A	412,37736
chr17:27575676-27576200	chr17	+	27575676	27576198	True	NM_005208,NM_020772	chr17,chr17	+,-	CRYBA1,NUFIP2	-1860,45018
chr17:38172134-38172426	chr17	+	38172156	38172474	True	NM_001079518,NM_000759,NR_033662,NM_172220,NM_172219,NM_001178147	chr17,chr17,chr17,chr17,chr17,chr17	-,+,+,+,+,+	MED24,CSF3,CSF3,CSF3,CSF3,CSF3	38465,-593,-593,-593,-593,-593
chr6:17280549-17280769	chr6	+	17280549	17280631	True	NM_001143941,NM_001143942,NM_005124,NM_153020	chr6,chr6,chr6,chr6	+,+,-,+	RBM24,RBM24,NUP153,RBM24	1663,1177,426241,2300
chr4:156873093-156874808	chr4	+	156873146	156874625	True	NM_005651,NM_001334	chr4,chr4	+,-	TDO2,CTSO	-48351,479
chr11:64692628-64692865	chr11	+	64692739	64692899	True	NM_015104,NM_006244	chr11,chr11	-,+	ATG2A,PPP2R5B	-8017,-647
chr17:38076582-38077573	chr17	+	38076673	38077378	True	NM_139280,NM_001042471,NM_018530,NM_001165959,NM_001165958,NM_001195545	chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,+	ORMDL3,GSDMB,GSDMB,GSDMB,GSDMB,LOC100505591	6563,-1770,-2880,-1770,-1770,20348
chr16:16328558-16328854	chr16	+	16328617	16328903	True	NM_001079528,NM_001004067	chr16,chr16	-,+	ABCC6,NOMO3	-11289,-2287
chr16:16328558-16328854	chr16	-	18571201	18571259	False	NM_001004060,NM_173614,NR_003569	chr16,chr16,chr16	-,-,+	NOMO2,NOMO2,ABCC6P1	2233,2233,11310
chr16:16328558-16328854	chr16	+	14929801	14929981	False	NR_023387,NM_014287	chr16,chr16	-,+	ABCC6P2,NOMO1	-11242,-2217
chr22:44893615-44893824	chr22	+	44893628	44893748	True	NR_028409,NM_032287	chr22,chr22	+,-	NCRNA00207,LDOC1L	71471,307
chr14:58765647-58765884	chr14	+	58765665	58765839	True	NM_023000,NM_023001,NM_002892,NR_029434,NR_029435	chr14,chr14,chr14,chr14,chr14	+,+,+,-,-	ARID4A,ARID4A,ARID4A,FLJ31306,FLJ31306	-494,-494,-494,-810,-810
chr3:48359789-48361349	chr3	+	48360082	48361184	True	NM_001080525,NM_001159927	chr3,chr3	-,+	SPINK8,FBXW12	8697,52524
chr4:15708027-15708449	chr4	+	15708026	15708453	True	NM_004334,NR_036464	chr4,chr4	+,-	BST1,FBXL5	-3506,-50991
chr4:581831-583020	chr4	+	581890	582796	True	NM_000283,NM_007100	chr4,chr4	+,-	PDE6B,ATP5I	36566,85381
chr9:21029809-21030287	chr9	+	21029810	21030126	True	NR_030166,NM_001010915	chr9,chr9	+,-	MIR491,PTPLAD2	-313757,1559
chr16:4611491-4611806	chr16	+	4611527	4611795	True	NM_001145011,NM_013399	chr16,chr16	+,-	LOC342346,C16orf5	-5087,-22711
chr14:35899132-35899841	chr14	+	35899162	35899755	True	NM_032594,NM_020529	chr14,chr14	+,-	INSM2,NFKBIA	103492,-25202
chrX:103021710-103021932	chrX	+	103021833	103021957	True	NM_000533,NM_001172285,NM_001128834,NM_199478	chrX,chrX,chrX,chrX	+,-,+,+	PLP1,GLRA4,PLP1,PLP1	9796,-38281,9481,9796
chr2:176860632-176862625	chr2	+	176861045	176862422	True	NM_030650,NM_000523	chr2,chr2	-,+	KIAA1715,HOXD13	4653,95109
chr5:151138335-151140066	chr5	+	151138383	151139782	True	NM_005754,NM_004045	chr5,chr5	+,-	G3BP1,ATOX1	11693,-173
chr3:142726578-142726917	chr3	+	142726578	142726956	True	NM_001080415,NR_034032	chr3,chr3	+,-	U2SURP,LOC100289361	-6257,-6269
chr11:46742104-46742685	chr11	+	46742145	46742577	True	NM_000506,NM_004308	chr11,chr11	+,-	F2,ARHGAP1	-1453,-20025
chr13:31773386-31773983	chr13	+	31773421	31773797	True	NM_194318,NM_006644	chr13,chr13	+,-	B3GALTL,HSPH1	314,-37304
chr11:73311532-73311955	chr11	+	73311542	73311750	True	NM_001130033,NM_015159	chr11,chr11	+,-	PLEKHB1,FAM168A	45472,-2314
chr19:43359433-43361084	chr19	+	43359777	43360603	True	NR_026824,NR_036584	chr19,chr19	-,+	PSG10P,LOC100289650	93,-33813
chr1:95586850-95587117	chr1	+	95586909	95587033	True	NM_001199691,NM_152487,NM_144988	chr1,chr1,chr1	+,+,-	TMEM56-RWDD3,TMEM56,ALG14	-3481,-4066,-48402
chr12:6678308-6678679	chr12	+	6678668	6678728	True	NM_002046,NM_001033714,NM_006170	chr12,chr12,chr12	+,-,-	GAPDH,NOP2,NOP2	-35062,-1188,-1188
chr22:20613683-20613959	chr22	+	20613687	20614005	True	NM_015672,NM_003426	chr22,chr22	-,+	RIMBP3,ZNF74	-151901,134474
chr22:20613683-20613959	chr22	-	21564896	21564954	False	NR_024583,NR_002829	chr22,chr22	+,-	POM121L8P,P2RX6P	71759,-166358
chr22:20613683-20613959	chr22	-	18763530	18763848	False	NM_005675,NR_003267	chr22,chr22	+,-	DGCR6,GGT3P	129887,15676
chr9:133525569-133526010	chr9	+	133525693	133526005	True	NR_027440,NM_021619	chr9,chr9	-,+	LOC100272217,PRDM12	-70812,13975
chr10:31990107-31990709	chr10	+	31990208	31990528	True	NM_001174094,NM_018287	chr10,chr10	+,-	ZEB1,ARHGAP12	-380197,227292
chr10:72241096-72242287	chr10	+	72241120	72242212	True	NM_018055,NM_014431	chr10,chr10	-,+	NODAL,KIAA1274	-39655,-2607
chrX:84367484-84368984	chrX	+	84367625	84369009	True	NM_001012980,NM_198450	chrX,chrX	-,+	SATL1,APOOL	-3651,-108778
chr20:2901414-2901761	chr20	+	2901492	2901790	True	NM_022760,NM_080841	chr20,chr20	-,+	FAM113A,PTPRA	-80160,2062
chr6:35182814-35183024	chr6	+	35182836	35183027	True	NM_152753,NM_018679	chr6,chr6	+,-	SCUBE3,TCP11	-697,-73649
chr2:232329747-232329949	chr2	+	232329766	232329998	True	NR_002921,NM_005381,NR_004398,NM_145236,NR_002908	chr2,chr2,chr2,chr2,chr2	-,-,-,+,-	SNORA75,NCL,SNORD82,B3GNT7,SNORD20	-9119,-561,-4613,-69482,-8532
chr15:41835566-41835982	chr15	+	41835700	41835953	True	NM_015540,NM_006293	chr15,chr15	-,+	RPAP1,TYRO3	568,15266
chr5:43313654-43315175	chr5	+	43313672	43315191	True	NM_153361,NM_002130,NM_001098272	chr5,chr5,chr5	+,-,-	MGC42105,HMGCS1,HMGCS1	-121396,-77,-77
chr2:45882422-45884400	chr2	+	45882609	45884347	True	NM_018079,NM_005400	chr2,chr2	-,+	SRBD1,PRKCE	-44176,-3623
chr1:115124377-115124761	chr1	+	115124383	115124449	True	NM_003176,NM_005872	chr1,chr1	+,-	SYCP1,BCAS2	273005,-118
chr19:38924280-38924594	chr19	+	38924309	38924631	True	NM_170604,NM_001146204,NM_001146205,NM_001146206,NM_001146207,NM_001146202,NM_001146203,NM_000540,NM_001042723	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,+,+	RASGRP4,RASGRP4,RASGRP4,RASGRP4,RASGRP4,RASGRP4,RASGRP4,RYR1,RYR1	-7364,-7364,-7364,-7364,-7364,-7364,-7364,-20,-20
chr9:138592117-138592411	chr9	+	138592296	138592364	True	NM_020822,NM_001012415,NM_001101677	chr9,chr9,chr9	+,-,-	KCNT1,SOHLH1,SOHLH1	1666,-922,-922
chr3:107790712-107791032	chr3	+	107790711	107791050	True	NR_015394,NM_001777	chr3,chr3	+,-	LOC285205,CD47	-188711,18942
chr21:44298077-44299012	chr21	+	44298309	44298991	True	NM_018669,NM_033661,NM_001001503	chr21,chr21,chr21	-,-,+	WDR4,WDR4,NDUFV3	737,737,14386
chr16:4522770-4523781	chr16	+	4522867	4523601	True	NM_020677,NM_002134,NM_001127204,NM_001127206	chr16,chr16,chr16,chr16	-,+,+,+	NMRAL1,HMOX2,HMOX2,HMOX2	1352,2739,2739,1117
chr7:129846546-129846851	chr7	+	129846839	129846899	True	NM_145268,NM_032842	chr7,chr7	+,-	C7orf45,TMEM209	804,-1501
chr11:46144158-46144390	chr11	+	46144181	46144404	True	NM_001101802,NM_052854,NM_016621	chr11,chr11,chr11	-,+,-	PHF21A,CREB3L1,PHF21A	-1196,154823,-1196
chr2:203107215-203108993	chr2	+	203107522	203108683	True	NM_003352,NM_001005782,NM_001005781,NM_015934	chr2,chr2,chr2,chr2	-,-,-,+	SUMO1,SUMO1,SUMO1,NOP58	-4200,-4200,-4200,21831
chr9:35617452-35618228	chr9	+	35617532	35618168	True	NM_001782,NM_006285	chr9,chr9	-,+	CD72,TESK1	306,-12302
chr2:27427488-27428047	chr2	+	27427531	27428057	True	NM_016085,NR_028323,NM_021095,NM_001170795,NM_080592	chr2,chr2,chr2,chr2,chr2	+,-,-,+,+	C2orf28,SLC5A6,SLC5A6,C2orf28,C2orf28	7161,7168,7168,7161,6841
chr19:49080906-49082055	chr19	+	49081032	49081538	True	NM_017708,NM_004605	chr19,chr19	-,+	FAM83E,SULT2B1	35206,-2090
chr1:109633982-109634246	chr1	+	109634017	109634296	True	NM_020141,NR_003023,NM_005645	chr1,chr1,chr1	+,+,-	TMEM167B,SCARNA2,TAF13	-665,8518,-15393
chr14:37640264-37641241	chr14	+	37640431	37641200	True	NM_001171170,NR_033240,NM_030631	chr14,chr14,chr14	-,+,-	SLC25A21,LOC100129794,SLC25A21	715,30,715
chr2:192106359-192108349	chr2	+	192106721	192108248	True	NM_001130158,NM_012223,NM_003151,NM_001161819	chr2,chr2,chr2,chr2	+,+,-,+	MYO1B,MYO1B,STAT4,MYO1B	1858,1858,-90796,2005
chr5:180229180-180229390	chr5	+	180229185	180229311	True	NM_001114617,NM_001114618,NM_001114619,NR_027183,NM_002406,NM_001114620	chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,+,-,-	MGAT1,MGAT1,MGAT1,LOC729678,MGAT1,MGAT1	7878,7558,1643,27647,789,1643
chr17:79632254-79632534	chr17	+	79632258	79632574	True	NM_002602,NM_199287,NM_001039842,NR_026872	chr17,chr17,chr17,chr17	-,+,-,-	PDE6G,CCDC137,C17orf90,PDE6G	-8651,1186,1094,-8651
chr16:124116-124739	chr16	+	124202	124458	True	NM_022450,NM_001015052,NM_002434,NM_001015054	chr16,chr16,chr16,chr16	-,+,+,+	RHBDF1,MPG,MPG,MPG	-1573,3710,3710,2559
chr13:114313506-114314526	chr13	+	114313640	114314494	True	NM_000705,NM_002929	chr13,chr13	-,+	ATP4B,GRK1	-1127,7102
chr12:71007462-71008565	chr12	+	71007503	71008589	True	NM_002837,NM_014505	chr12,chr12	-,+	PTPRB,KCNMB4	-3879,-247492
chr1:36853110-36853862	chr1	+	36853157	36853883	True	NM_032881,NM_024676,NM_032017	chr1,chr1,chr1	-,+,-	LSM10,SH3D21,STK40	9660,-80500,-1672
chr17:80655074-80655338	chr17	+	80655121	80655387	True	NM_006822,NM_024619	chr17,chr17	-,+	RAB40B,FN3KRP	1261,19194
chr5:56589269-56590481	chr5	+	56589741	56590503	True	NM_001127236,NM_001017992	chr5,chr5	+,-	GPBP1,ACTBL2	-79891,188183
chr22:29169271-29170146	chr22	+	29169364	29169985	True	NM_173510,NM_001079539	chr22,chr22	+,-	CCDC117,XBP1	-765,26632
chrX:106242076-106242311	chrX	+	106242147	106242350	True	NM_001085354,NM_020384,NM_024657	chrX,chrX,chrX	-,+,-	MORC4,CLDN2,MORC4	1175,-78594,1175
chr6:96025650-96025941	chr6	+	96025704	96025908	True	NM_001143957,NM_024641	chr6,chr6	-,+	GPR63,MANEA	1259495,-345
chr4:95374950-95376486	chr4	+	95375020	95376466	True	NM_001011513,NM_001011516,NM_001011515,NM_014485,NM_006457,NR_024179	chr4,chr4,chr4,chr4,chr4,chr4	+,+,+,-,+,+	PDLIM5,PDLIM5,PDLIM5,HPGDS,PDLIM5,PDLIM5	-2034,-2034,-2034,-110993,-2034,-2034
chr1:150460518-150460804	chr1	+	150460517	150460855	True	NM_025150,NM_001197320	chr1,chr1	+,-	TARS2,MCL1	-648,91411
chr2:24822758-24824660	chr2	+	24822986	24824419	True	NM_147233,NM_001013663	chr2,chr2	+,-	NCOA1,C2orf79	-15699,191883
chr11:62555127-62555594	chr11	+	62555213	62555593	True	NM_199337,NM_001080501	chr11,chr11	+,-	TMEM179B,TMEM223	-390,3943
chr22:22020295-22020545	chr22	+	22020294	22020580	True	NM_148175,NM_148176,NM_014337,NM_001017964	chr22,chr22,chr22,chr22	+,+,+,-	PPIL2,PPIL2,PPIL2,YDJC	-72,-72,-72,-35954
chr4:123844220-123844424	chr4	+	123844227	123844453	True	NM_198041,NM_007083,NM_145207	chr4,chr4,chr4	-,-,+	NUDT6,NUDT6,SPATA5	-104,-468,-53
chr12:68708167-68708853	chr12	+	68708172	68708794	True	NM_017440,NM_001010942	chr12,chr12	-,+	MDM1,RAP1B	17425,295857
chr14:88791943-88792957	chr14	+	88791971	88792898	True	NM_021161,NM_001040428,NM_138317	chr14,chr14,chr14	-,+,-	KCNK10,SPATA7,KCNK10	408,59089,-2378
chr20:62738958-62739169	chr20	+	62738988	62739208	True	NM_001200019	chr20	+	OPRL1	-22670
chr11:122850206-122850451	chr11	+	122850348	122850495	True	NR_027288,NM_001098169	chr11,chr11	+,-	LOC341056,BSX	37778,1935
chr9:130640833-130641210	chr9	+	130640871	130641159	True	NM_000476,NM_001018078	chr9,chr9	-,+	AK1,FPGS	-849,-75414
chr19:36860471-36860827	chr19	+	36860605	36860708	True	NM_020917,NR_033748	chr19,chr19	-,+	ZFP14,LOC644189	9460,51730
chr17:72539814-72540363	chr17	+	72539821	72540397	True	NM_152460,NM_006678	chr17,chr17	+,-	C17orf77,CD300C	40659,1935
chr17:79283388-79283676	chr17	+	79283393	79283465	True	NM_178519,NR_038080,NM_001086521	chr17,chr17,chr17	-,-,+	C17orf55,C17orf55,C17orf89	-345,-345,-70333
chr22:32338188-32339967	chr22	+	32338507	32339837	True	NM_015372,NM_003405	chr22,chr22	-,+	C22orf24,YWHAH	1549,641
chr13:45560681-45561894	chr13	+	45560862	45561945	True	NM_012345,NM_018559	chr13,chr13	-,+	NUFIP1,KIAA1704	1723,1741
chr19:46802952-46803210	chr19	+	46803083	46803197	True	NM_152796,NM_152795,NM_022462,NM_152794,NM_032040	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	HIF3A,HIF3A,HIF3A,HIF3A,CCDC8	-1501,-2831,-1501,3658,113772
chr17:48795760-48796228	chr17	+	48795841	48796003	True	NM_052855,NM_016424,NM_006107	chr17,chr17,chr17	-,+,+	ANKRD40,LUC7L3,LUC7L3	-10571,922,922
chr15:35048072-35049364	chr15	+	35048249	35049382	True	NM_175741,NM_020660	chr15,chr15	+,-	C15orf55,GJD2	-410234,-1560
chr21:37505619-37506230	chr21	+	37505983	37506150	True	NM_017438,NM_001236	chr21,chr21	-,+	SETD4,CBR3	-73167,1112
chr3:52477000-52477404	chr3	+	52477022	52477436	True	NM_020163,NM_007184	chr3,chr3	-,+	SEMA3G,NISCH	1657,12087
chr19:3092191-3092522	chr19	+	3092511	3092571	True	NM_002067,NM_198969	chr19,chr19	+,-	GNA11,AES	1836,-29547
chr20:20694716-20695925	chr20	+	20694859	20695687	True	NM_020343,NM_002196	chr20,chr20	-,+	RALGAPA2,INSM1	-1593,-346158
chr19:39233582-39233922	chr19	+	39233598	39233820	True	NM_144691,NM_001042507	chr19,chr19	-,+	CAPN12,LGALS7B	1344,46029
chr19:42820104-42820896	chr19	+	42820533	42820727	True	NM_173633,NM_001145940,NM_001410	chr19,chr19,chr19	+,-,+	TMEM145,PAFAH1B3,MEGF8	-3107,-13581,9033
chr12:76425961-76426249	chr12	+	76425998	76426253	True	NM_007350,NM_006851	chr12,chr12	-,+	PHLDA1,GLIPR1	-442,-551536
chr9:130551418-130551731	chr9	+	130551453	130551737	True	NM_001261,NM_170600,NR_036055	chr9,chr9,chr9	+,-,+	CDK9,SH2D3C,MIR2861	-3199,-10405,-3307
chr11:74866661-74867385	chr11	+	74866915	74867402	True	NM_001005285,NM_001145212,NM_007256,NM_001145211	chr11,chr11,chr11,chr11	-,+,+,+	OR2AT4,SLCO2B1,SLCO2B1,SLCO2B1	-66157,-4934,-4934,3441
chr11:86751898-86752472	chr11	+	86751954	86752490	True	NR_033149,NM_012193,NM_022918,NM_001168724	chr11,chr11,chr11,chr11	+,-,+,+	TMEM135,FZD4,TMEM135,TMEM135	-3119,-85521,-3119,-3119
chr17:1013619-1014292	chr17	+	1013679	1014317	True	NM_001092,NM_013337	chr17,chr17	-,+	ABR,TIMM22	-1355,-113373
chr13:19770501-19772428	chr13	+	19770651	19771969	True	NM_006001,NR_034026	chr13,chr13	-,+	TUBA3C,LOC100287114	-14659,147219
chr13:19770501-19772428	chr13	-	21765208	21765258	False	NM_145061,NM_024026	chr13,chr13	-,+	SKA3,MRP63	-14467,-14887
chr10:102791831-102792092	chr10	+	102791976	102792036	True	NM_001195263,NM_024895,NM_030971	chr10,chr10,chr10	-,-,+	PDZD7,PDZD7,SFXN3	-1062,-1062,-1031
chr15:67415243-67416683	chr15	+	67415857	67416683	True	NM_001145102,NM_024666	chr15,chr15	+,-	SMAD3,AAGAB	1370,130441
chr6:72294209-72294776	chr6	+	72294215	72294667	True	NM_024576,NR_026807	chr6,chr6	+,-	OGFRL1,C6orf155	-295796,-163767
chr12:6485620-6486047	chr12	+	6485725	6486047	True	NM_001159576,NM_002342,NM_001159575,NM_001038	chr12,chr12,chr12,chr12	-,+,-,-	SCNN1A,LTBR,SCNN1A,SCNN1A	-1335,7309,526,-820
chr14:88851730-88851933	chr14	+	88851805	88851951	True	NM_021161,NM_001040428,NM_018418	chr14,chr14,chr14	-,+,+	KCNK10,SPATA7,SPATA7	-58549,36,36
chr19:57942330-57942742	chr19	+	57942496	57942797	True	NM_020633,NM_001023561	chr19,chr19	-,+	VN1R1,ZNF749	25367,3895
chr10:125751575-125751825	chr10	+	125751584	125751750	True	NM_198148,NM_153442	chr10,chr10	-,+	CPXM2,GPR26	-100084,-325764
chr9:99051141-99052159	chr9	+	99051422	99052066	True	NM_014282,NM_000197	chr9,chr9	+,-	HABP4,HSD17B3	160347,12418
chr3:184427931-184428701	chr3	+	184427971	184428612	True	NM_001009921,NM_022149	chr3,chr3	+,-	VPS8,MAGEF1	101318,1277
chr13:64312377-64312703	chr13	+	64312393	64312715	True	NM_022843,NR_002171	chr13,chr13	-,+	PCDH20,OR7E156P	-2322738,-876
chr5:173414665-173415428	chr5	+	173414823	173415337	True	NM_138369,NM_001144954	chr5,chr5	-,+	BOD1,C5orf47	-371157,824
chr5:172262820-172263037	chr5	+	172262876	172262956	True	NM_004417,NM_001031711	chr5,chr5	-,+	DUSP1,ERGIC1	-64673,-1704
chr11:63302992-63303922	chr11	+	63303077	63303719	True	NM_017878,NM_004585	chr11,chr11	-,+	HRASLS2,RARRES3	27186,553
chr11:47507635-47508052	chr11	+	47507769	47507967	True	NM_001025596,NM_152264,NM_198700,NM_001172640	chr11,chr11,chr11,chr11	-,+,-,-	CELF1,SLC39A13,CELF1,CELF1	2667,-77782,8164,2667
chr2:64975639-64977307	chr2	+	64975803	64977238	True	NM_014755,NR_034023	chr2,chr2	-,+	SERTAD2,LOC339807	-94757,-141408
chr10:5440600-5441510	chr10	+	5440791	5441553	True	NM_001047160,NM_001171864,NM_024803	chr10,chr10,chr10	+,-,-	NET1,TUBAL3,TUBAL3	12964,5290,5290
chr4:699286-699644	chr4	+	699316	699659	True	NM_006315,NM_032219	chr4,chr4	+,-	PCGF3,MFSD7	-69,-16343
chr12:53209157-53211033	chr12	+	53209453	53210794	True	NM_199187,NM_002272	chr12,chr12	+,-	KRT18,KRT4	131860,-1118
chr14:55225349-55226650	chr14	+	55225567	55226685	True	NR_036194,NM_001161577	chr14,chr14	-,+	MIR4308,SAMD4A	118276,-4112
chr1:44400179-44400663	chr1	+	44400241	44400593	True	NM_057090,NM_001136215,NM_006934,NM_057091	chr1,chr1,chr1,chr1	+,+,-,+	ARTN,ARTN,SLC6A9,ARTN	-1300,-1300,82454,-1300
chr11:65770189-65771149	chr11	+	65770306	65771188	True	NM_003860,NM_001143985,NM_032325,NM_001323	chr11,chr11,chr11,chr11	+,+,-,+	BANF1,BANF1,EIF1AD,CST6	-807,-807,-728,8273
chr6:82772429-82772991	chr6	+	82772499	82772594	True	NM_006670,NM_015525	chr6,chr6	+,-	TPBG,IBTK	300328,184917
chr2:210284358-210285684	chr2	+	210284894	210285698	True	NM_152519,NM_001039538	chr2,chr2	-,+	C2orf67,MAP2	750405,3072
chr16:71395023-71396156	chr16	+	71395201	71396180	True	NM_007088,NR_027910,NM_018348,NM_001740	chr16,chr16,chr16,chr16	+,+,-,+	CALB2,CALB2,FTSJD1,CALB2	-2637,-2637,-71692,-2637
chr17:48476833-48477814	chr17	+	48477184	48477348	True	NM_025149,NM_018509	chr17,chr17	+,-	ACSF2,LRRC59	26170,-2270
chr2:32579345-32580057	chr2	+	32579447	32579895	True	NM_021209,NM_016252	chr2,chr2	-,+	NLRC4,BIRC6	-88635,2200
chr4:83351536-83351884	chr4	+	83351590	83351672	True	NR_003249,NM_031372,NM_021204	chr4,chr4,chr4	-,-,+	HNRPDL,HNRPDL,ENOPH1	-212,-212,53
chr3:69157096-69158769	chr3	+	69157175	69158600	True	NM_006407,NM_198271	chr3,chr3	+,-	ARL6IP5,LMOD3	-23137,13196
chr17:10266555-10267236	chr17	+	10266862	10267269	True	NM_003802,NM_020233	chr17,chr17	-,+	MYH13,C17orf48	9104,333657
chr22:21770218-21770899	chr22	+	21770276	21770847	True	NM_015094,NR_003700	chr22,chr22	+,-	HIC2,PI4KAP2	845,100984
chr22:21770218-21770899	chr22	-	20428771	20429210	False	NR_003563,NR_026919	chr22,chr22	-,+	PI4KAP1,LOC150197	-30076,-234974
chr22:21770218-21770899	chr22	-	21872750	21873189	False	NR_003700,NM_003347	chr22,chr22	-,+	PI4KAP2,UBE2L3	-970,48767
chr10:81267402-81267696	chr10	+	81267427	81267703	True	NM_001099692,NM_001098668	chr10,chr10	+,-	EIF5AL1,SFTPA2	4653,52510
chr10:81267402-81267696	chr10	-	82012144	82012195	False	NM_000429,NM_032372	chr10,chr10	-,+	MAT1A,DYDC2	37290,104362
chr1:151828013-151829277	chr1	+	151828168	151828984	True	NR_024237,NM_182578	chr1,chr1	+,-	LOC100132111,THEM5	-17274,-1995
chr16:30488075-30488284	chr16	+	30488259	30488333	True	NM_012248,NM_002209,NM_001114380	chr16,chr16,chr16	-,+,+	SEPHS2,ITGAL,ITGAL	-31035,-4332,-4332
chr1:156122420-156123350	chr1	+	156122448	156123372	True	NM_001093725,NM_001193302,NM_001193301,NM_001193300,NM_022367	chr1,chr1,chr1,chr1,chr1	-,+,+,+,+	MEX3A,SEMA4A,SEMA4A,SEMA4A,SEMA4A	-70659,-4,-2764,-51,-51
chr20:62689085-62689352	chr20	+	62689106	62689198	True	NM_198723,NM_018419,NM_003195	chr20,chr20,chr20	+,-,+	TCEA2,SOX18,TCEA2	-718,-8127,4811
chr18:47809163-47810816	chr18	+	47809175	47810691	True	NM_001101654,NM_001204143,NM_001204139,NM_015844,NM_015847,NM_015846,NM_001204140,NM_001204141,NM_001204142,NM_001204136,NM_001204151,NM_001039535,NM_015845,NM_002384,NM_014593,NM_001204137,NM_001204138	chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18	-,-,-,-,-,-,-,-,-,-,-,+,-,-,-,-,-	CXXC1,MBD1,MBD1,MBD1,MBD1,MBD1,MBD1,MBD1,MBD1,MBD1,MBD1,SKA1,MBD1,MBD1,CXXC1,MBD1,MBD1	4051,-1038,-1031,-1031,-1031,-1031,-1031,-1031,-1031,-1031,-2788,90700,-1031,-1031,4051,-1031,-1031
chr13:46424878-46425492	chr13	+	46424966	46425475	True	NM_198849,NM_152719	chr13,chr13	-,+	SIAH3,SPERT	421,-148571
chr11:94499975-94500610	chr11	+	94499975	94500559	True	NM_016403,NM_130847	chr11,chr11	-,+	CWC15,AMOTL1	206267,948
chr1:40849213-40849659	chr1	+	40849213	40849504	True	NM_022733,NM_001198979,NM_001198978,NM_001852	chr1,chr1,chr1,chr1	+,+,+,-	SMAP2,SMAP2,SMAP2,COL9A2	-9896,9512,-8969,-66274
chr11:65820518-65820869	chr11	+	65820657	65820838	True	NM_033036,NM_006842	chr11,chr11	-,+	GAL3ST3,SF3B2	-4006,-892
chrY:27629972-27630733	chrY	+	27629991	27630571	True	NR_002179,NR_001554	chrY,chrY	-,+	TTTY17C,CSPG4P1Y	-299071,-987
chrY:27629972-27630733	chrY	-	26331861	26332441	False	NR_001526,NR_001554	chrY,chrY	+,-	TTTY17A,CSPG4P1Y	299037,987
chrX:69670142-69671945	chrX	+	69670257	69671759	True	NM_020730,NM_016484,NM_021120,NM_001166278	chrX,chrX,chrX,chrX	+,-,+,+	DLG3,PDZD11,DLG3,DLG3	395,-160459,-5610,3186
chr15:41166586-41167779	chr15	+	41166618	41167109	True	NM_020857,NM_133639	chr15,chr15	+,-	VPS18,RHOV	19518,-131
chr19:10229486-10229713	chr19	+	10229538	10229634	True	NM_002566,NM_003755,NR_003688	chr19,chr19,chr19	+,-,+	P2RY11,EIF3G,SNORD105B	-7392,1015,-9164
chr8:48872787-48873407	chr8	+	48872814	48873381	True	NM_001081640,NM_182746,NM_006904,NM_005914	chr8,chr8,chr8,chr8	-,+,-,+	PRKDC,MCM4,PRKDC,MCM4	-71,-102,-71,-102
chr7:2271777-2272020	chr7	+	2271784	2272008	True	NM_003550,NM_002452,NM_198952,NM_198950,NM_013393,NM_001013836,NM_001013837,NM_198948,NM_198949	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,-,-,-,+,+	MAD1L1,NUDT1,NUDT1,NUDT1,FTSJ2,MAD1L1,MAD1L1,NUDT1,NUDT1	625,9848,9887,9887,9875,625,625,9848,9848
chr19:10194625-10195896	chr19	+	10194808	10195919	True	NM_018381,NM_031917	chr19,chr19	+,-	C19orf66,ANGPTL6	886,17556
chr3:153203807-153204916	chr3	+	153203874	153204830	True	NR_037901,NM_001101337	chr3,chr3	-,+	LOC100507524,C3orf79	634227,-1645
chrX:153535147-153536290	chrX	+	153535581	153536215	True	NM_001205201,NM_001145934	chrX,chrX	-,+	TEX28,TKTL1	-12017,-2223
chr4:78511286-78512425	chr4	+	78511346	78512432	True	NM_144571,NM_006419	chr4,chr4	-,+	CNOT6L,CXCL13	228170,-78499
chr7:105030966-105031945	chr7	+	105031242	105031996	True	NM_182692,NM_021930	chr7,chr7	-,+	SRPK2,RINT1	-1901,140535
chr17:34079996-34080263	chr17	+	34079995	34080253	True	NM_145272,NM_139285	chr17,chr17	+,-	C17orf50,GAS2L2	7662,-98
chr1:58715502-58715804	chr1	+	58715520	58715830	True	NM_021080,NR_034014	chr1,chr1	-,+	DAB1,LOC100131060	431,534992
chr9:116225450-116225726	chr9	+	116225472	116225706	True	NM_017443,NM_017790	chr9,chr9	-,+	POLE3,RGS3	-52443,302
chr14:20114427-20114683	chr22	+	16382175	16382355	False	NM_001005239,NR_001591	chr22,chr22	-,+	OR11H1,psiTPTE22	67499,700445
chr14:20114427-20114683	chr14	+	20114535	20114715	True	NM_001197287,NM_172194	chr14,chr14	-,+	OR11H2,OR4Q3	67826,100871
chr3:64671888-64672127	chr3	+	64671901	64672137	True	NM_182920,NR_030317	chr3,chr3	-,+	ADAMTS9,MIR548A2	1278,33545
chr12:109912330-109913136	chr12	+	109912361	109912931	True	NM_183415,NM_031954,NM_130466	chr12,chr12,chr12	+,-,+	UBE3B,KCTD10,UBE3B	2507,2274,2507
chr3:186543271-186543808	chr3	+	186543274	186543770	True	NM_181573,NM_001177800	chr3,chr3	-,+	RFC4,ADIPOQ	-18790,16692
chr3:195885829-195886886	chr3	+	195886027	195886841	True	NR_034088,NM_001039617	chr3,chr3	+,-	LOC401109,ZDHHC19	-16577,51509
chrX:41193091-41193295	chrX	+	41193115	41193339	True	NM_001193417,NM_001193416,NM_001356,NR_027761	chrX,chrX,chrX,chrX	+,+,+,-	DDX3X,DDX3X,DDX3X,LOC100132831	-515,-515,-515,-500666
chr6:167279068-167280128	chr6	+	167279109	167280146	True	NM_007045,NM_001006932	chr6,chr6	+,-	FGFR1OP,RPS6KA2	132669,-3338
chr2:242672064-242672968	chr2	+	242672583	242672987	True	NM_152783,NR_033255	chr2,chr2	+,-	D2HGDH,DTYMK	1042,-46200
chr19:47735530-47736786	chr19	+	47735654	47736334	True	NM_001127241,NM_001127240,NM_001127242,NR_036159,NR_036158,NM_014417	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,+,-	BBC3,BBC3,BBC3,MIR3191,MIR3190,BBC3	-41,-41,-41,-5378,-5507,-1203
chr1:3714035-3714240	chr1	+	3714035	3714278	True	NM_020710,NM_001163724	chr1,chr1	-,+	LRRC47,LOC388588	-967,-24736
chr3:75835787-75837214	chr3	+	75835975	75837247	True	NR_036235,NM_001128223	chr3,chr3	+,-	MIR4273,ZNF717	-48595,-1720
chr7:34873296-34874194	chr7	+	34873469	34874189	True	NR_015356,NM_207173	chr7,chr7	-,+	AAA1,NPSR1	8,-175623
chr12:69871355-69871679	chr12	+	69871366	69871474	True	NM_006654,NM_001042555,NR_037475	chr12,chr12,chr12	+,+,-	FRS2,FRS2,MIR3913-1	-7299,-7299,107189
chr22:37977009-37977659	chr22	+	37977148	37977644	True	NM_152243,NM_006498	chr22,chr22	+,-	CDC42EP1,LGALS2	-20741,-1124
chr19:50195218-50195678	chr19	+	50195468	50195682	True	NM_001101340,NM_001136052,NM_001571,NM_152359,NM_001199752,NM_001199753	chr19,chr19,chr19,chr19,chr19,chr19	+,+,-,+,+,+	C19orf76,CPT1C,IRF3,CPT1C,CPT1C,CPT1C	-3577,-1154,-26336,-1154,-1154,-1154
chr13:25497211-25498057	chr13	+	25497261	25497745	True	NM_018451,NM_031277	chr13,chr13	-,+	CENPJ,RNF17	-176,-159011
chrY:10036598-10036935	chrY	+	10036613	10036730	True	NR_003593,NR_003589	chrY,chrY	+,-	TTTY23B,TTTY1B	-288257,-424685
chr10:108893211-108894534	chr10	+	108893464	108894549	True	NM_001013031,NM_014978	chr10,chr10	-,+	SORCS1,SORCS3	29796,-2492657
chr16:21615443-21617405	chr16	+	21615645	21617170	True	NM_001077180,NM_016025,NM_005849	chr16,chr16,chr16	+,+,-	METTL9,METTL9,IGSF6	-4841,-4841,46860
chr12:50561765-50562162	chr12	+	50562111	50562171	True	NM_032901,NM_147190	chr12,chr12	+,-	C12orf62,LASS5	-56264,-1014
chr5:137199034-137199414	chr5	+	137199156	137199262	True	NM_001135940,NM_006805,NM_006790	chr5,chr5,chr5	+,-,+	MYOT,HNRNPA0,MYOT	4282,-109117,4282
chr13:52733377-52733577	chr13	+	52733421	52733559	True	NM_001146099,NM_152720,NR_027415,NM_002498,NM_021645	chr13,chr13,chr13,chr13,chr13	-,-,-,-,+	NEK3,NEK3,NEK3,NEK3,UTP14C	487,161,487,487,-134645
chr4:122874332-122875762	chr4	+	122874414	122875672	True	NM_001130698,NM_005033	chr4,chr4	-,+	TRPC3,EXOSC9	-1505,-152003
chr5:175840900-175841527	chr5	+	175840923	175841529	True	NM_001834,NM_007097,NM_138820	chr5,chr5,chr5	-,-,+	CLTB,CLTB,HIGD2A	2061,2061,-25190
chr3:96336981-96337621	chr3	+	96337021	96337631	True	NM_001042533,NM_001080448	chr3,chr3	-,+	MINA,EPHA6	1353643,195793
chr17:6900343-6901035	chr17	+	6900398	6900832	True	NM_000697,NR_029712	chr17,chr17	+,-	ALOX12,MIR195	-1065,20238
chr2:234162289-234162928	chr2	+	234162488	234162918	True	NM_019850,NM_001190267,NM_001190266,NM_198890,NM_030803,NM_017974	chr2,chr2,chr2,chr2,chr2,chr2	-,+,+,+,+,+	NGEF,ATG16L1,ATG16L1,ATG16L1,ATG16L1,ATG16L1	-284537,-2335,-2335,-2335,-2335,-2335
chr17:73503172-73504444	chr17	+	73503321	73504357	True	NM_207346,NM_020753,NM_001142643	chr17,chr17,chr17	+,-,-	TSEN54,CASKIN2,CASKIN2	8251,7320,1651
chr22:35854953-35855292	chr22	+	35854954	35855302	True	NM_005368,NM_006739	chr22,chr22	-,+	MB,MCM5	158132,-58889
chr2:224893322-224894505	chr2	+	224893395	224894390	True	NM_022915,NM_001136530,NM_006216,NM_001136528	chr2,chr2,chr2,chr2	+,-,-,-	MRPL44,SERPINE2,SERPINE2,SERPINE2	-71340,9026,9705,9705
chr2:241510193-241510684	chr2	+	241510291	241510675	True	NM_017844,NM_018226	chr2,chr2	-,+	ANKMY1,RNPEPL1	-12886,-2338
chr2:239336426-239337089	chr2	+	239336458	239336890	True	NR_037809,NM_001040445	chr2,chr2	-,+	LOC151171,ASB1	127300,-883
chrX:135250588-135251739	chrX	+	135250720	135251634	True	NM_001159704,NM_001173517,NM_001167819	chrX,chrX,chrX	+,-,+	FHL1,MAP7D3,FHL1	-102,82154,161
chr1:19934897-19936856	chr1	+	19934955	19936838	True	NM_004930,NM_001204089	chr1,chr1	-,+	CAPZB,C1orf15-NBL1	-122889,-11535
chr1:187340051-187340965	chr1	+	187340746	187340993	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-691187,-542772
chrX:24716861-24717578	chrX	+	24717075	24717591	True	NM_016937,NM_001163264	chrX,chrX	+,-	POLA1,PCYT1B	-5062,-26096
chr8:98881831-98882466	chr8	+	98881851	98882398	True	NR_002581,NM_030583,NM_002380	chr8,chr8,chr8	-,+,+	SNORA72,MATN2,MATN2	172098,-591,-591
chr13:45993188-45993612	chr13	+	45993396	45993461	True	NM_001204476,NM_001010875	chr13,chr13	+,-	COG3,SLC25A30	45568,-880
chr14:63784572-63785332	chr14	+	63784625	63785312	True	NM_145171,NM_020663	chr14,chr14	-,+	GPHB5,RHOJ	-62,-113531
chr6:26159524-26160476	chr6	+	26159551	26160390	True	NM_138720,NM_003539,NM_005321,NM_021063	chr6,chr6,chr6,chr6	+,-,+,+	HIST1H2BD,HIST1H4D,HIST1H1E,HIST1H2BD	-1253,28965,-3043,-1253
chr19:52692546-52692947	chr19	+	52692752	52692952	True	NM_001102657,NR_033500,NM_014225	chr19,chr19,chr19	-,+,+	ZNF836,PPP2R1A,PPP2R1A	-17856,102,102
chr5:167719977-167720251	chr5	+	167720061	167720193	True	NM_001161661,NM_015238,NM_001161662,NR_029520	chr5,chr5,chr5,chr5	+,+,+,-	WWC1,WWC1,WWC1,MIR103-1	-1047,-1047,-1047,267835
chr20:32900931-32902243	chr20	+	32901190	32902289	True	NM_031483,NM_001161766,NM_000687	chr20,chr20,chr20	+,-,-	ITCH,AHCY,AHCY	48772,-1582,-9975
chrX:53111704-53111963	chrX	+	53111706	53111988	True	NM_022117,NM_014138	chrX,chrX	+,-	TSPYL2,FAM156A	-215,-125530
chr17:76620813-76621143	chr17	+	76620863	76621051	True	NM_173628,NM_024419	chr17,chr17	-,+	DNAH17,PGS1	-47387,-246179
chr9:23825086-23826340	chr9	+	23825144	23826214	True	NM_022160,NM_004432,NM_001171197,NM_001171195	chr9,chr9,chr9,chr9	+,-,-,-	DMRTA1,ELAVL2,ELAVL2,ELAVL2	-1378355,36,-3666,-3301
chr16:2525912-2526668	chr16	+	2525931	2526717	True	NM_001199107,NM_006181,NM_020705,NM_001048212	chr16,chr16,chr16,chr16	+,+,+,-	TBC1D24,NTN3,TBC1D24,CEMP1	-835,-4482,-835,54742
chr18:43918837-43920116	chr18	+	43919055	43920080	True	NM_001173129,NM_152470	chr18,chr18	-,+	LOXHD1,RNF165	179019,-4919
chr1:44584687-44585720	chr1	+	44584896	44585643	True	NM_001024845,NM_173484	chr1,chr1	-,+	SLC6A9,KLF17	-87762,-427
chr8:97172184-97172677	chr8	+	97172311	97172638	True	NM_001001557,NM_014754	chr8,chr8	-,+	GDF6,PTDSS1	432,101528
chr8:109095532-109095846	chr8	+	109095697	109095877	True	NM_178565,NM_014673	chr8,chr8	-,+	RSPO2,TTC35	86,359975
chr2:220285392-220286159	chr2	+	220285609	220286201	True	NM_012100,NM_001927	chr2,chr2	-,+	DNPEP,DES	-32947,-2561
chr20:62287671-62288344	chr20	+	62287834	62288214	True	NR_037882,NM_016434,NM_015894,NM_032957	chr20,chr20,chr20,chr20	+,+,-,+	RTEL1-TNFRSF6B,RTEL1,STMN3,RTEL1	948,948,-3054,948
chr14:105564850-105566842	chr14	+	105564909	105566613	True	NM_174891,NM_013345	chr14,chr14	+,-	C14orf79,GPR132	-112350,-33155
chr2:234262375-234262750	chr2	+	234262496	234262693	True	NM_018218,NM_152879	chr2,chr2	-,+	USP40,DGKD	211594,459
chr17:42836968-42837200	chr17	+	42837034	42837228	True	NM_144609,NM_002390	chr17,chr17	-,+	CCDC43,ADAM11	-69869,-517
chr16:767888-768114	chr16	+	767950	768136	True	NM_001031737,NM_024042,NM_032304,NM_023933	chr16,chr16,chr16,chr16	-,+,+,+	CCDC78,METRN,HAGHL,FAM173A	8387,-2828,9129,3021
chr7:22861124-22861565	chr7	+	22861207	22861500	True	NR_003075,NM_019059	chr7,chr7	+,-	SNORD93,TOMM7	34731,971
chr1:239792789-239794193	chr1	+	239793070	239794106	True	NM_000740,NM_022469	chr1,chr1	+,-	CHRM3,GREM2	-751,981406
chr3:194173103-194174034	chr3	+	194173269	194173638	True	NR_033929,NM_024524	chr3,chr3	+,-	FLJ34208,ATP13A3	34230,15389
chr2:232396619-232397277	chr2	+	232396796	232397326	True	NM_006056,NM_152614	chr2,chr2	-,+	NMUR1,C2orf57	-1614,60248
chr11:61953819-61954905	chr11	+	61953827	61954951	True	NM_006552,NM_206998	chr11,chr11	+,-	SCGB1D1,SCGB1D4	2758,111635
chr2:39143447-39144234	chr2	+	39143536	39143869	True	NM_001145451,NM_198963	chr2,chr2	+,-	ARHGEF33,DHX57	2634,-40515
chr19:52674771-52676223	chr19	+	52675010	52675678	True	NM_001102657,NM_014225	chr19,chr19	-,+	ZNF836,PPP2R1A	-114,17376
chr2:172086010-172087689	chr2	+	172086056	172087439	True	NM_001136554,NM_001164821	chr2,chr2	-,+	TLK1,DCAF17	435,203321
chr6:166580857-166581087	chr6	+	166580857	166581049	True	NM_003181,NR_027284	chr6,chr6	-,+	T,LOC441177	1132,-179869
chr11:45114905-45115582	chr11	+	45114950	45115610	True	NM_006034,NM_020229	chr11,chr11	-,+	TP53I11,PRDM11	-142342,-47
chr22:25004500-25004919	chr22	+	25004506	25004967	True	NM_005265,NM_207644,NM_001032365,NM_001032364	chr22,chr22,chr22,chr22	+,-,+,+	GGT1,C22orf36,GGT1,GGT1	-5377,-15471,-931,-5433
chr22:25004500-25004919	chr22	-	18780807	18780861	False	NM_005675,NR_003267	chr22,chr22	+,-	DGCR6,GGT3P	112874,-1333
chr22:25004500-25004919	chr22	-	21581915	21581969	False	NR_024583,NR_002829	chr22,chr22	+,-	POM121L8P,P2RX6P	54744,-183377
chr22:25004500-25004919	chr2	+	91961432	91961893	False	NR_003503,NR_027238	chr2,chr2	+,-	GGT8P,LOC654342	1474,-113457
chr5:141002612-141003353	chr5	+	141002726	141003319	True	NM_005219,NM_001130029,NM_001079812	chr5,chr5,chr5	-,+,-	DIAPH1,RELL2,DIAPH1	-4104,13197,-4104
chr1:192305489-192305940	chr1	+	192305637	192305847	True	NM_001039152,NM_001199261	chr1,chr1	+,-	RGS21,UCHL5	-19566,722734
chr9:95526749-95526968	chr9	+	95526799	95526951	True	NR_026868,NM_015250,NM_001003800	chr9,chr9,chr9	+,-,-	ANKRD19,BICD2,BICD2	44941,182,182
chrX:16803597-16803878	chrX	+	16803617	16803880	True	NM_019857,NM_001168683,NM_018360	chrX,chrX,chrX	-,+,+	CTPS2,TXLNG,TXLNG	-72558,674,674
chr17:74548367-74550333	chr17	+	74548585	74550246	True	NM_134268,NR_004396,NR_004397,NR_004395	chr17,chr17,chr17,chr17	-,+,+,+	CYGB,SNORD1B,SNORD1C,SNORD1A	-14803,6943,4627,7468
chr19:14681442-14682127	chr19	+	14681448	14682031	True	NM_004146,NM_001204118	chr19,chr19	-,+	NDUFB7,CLEC17A	909,11864
chr1:1267952-1268192	chr1	+	1268027	1268117	True	NM_152228,NM_017871,NM_001029885	chr1,chr1,chr1	+,-,+	TAS1R3,CPSF3L,GLTPD1	-1352,-7981,-7935
chr7:107188579-107189927	chr7	+	107188896	107189790	True	NM_006348,NM_181581	chr7,chr7	-,+	COG5,DUS4L	15227,14641
chr12:102112789-102114779	chr12	+	102112958	102114560	True	NM_001177948,NM_020244	chr12,chr12	-,+	SYCP3,CHPT1	18749,-21598
chr20:34896021-34896362	chr20	+	34896113	34896361	True	NR_027451,NM_015511	chr20,chr20	-,+	LOC647979,C20orf4	-257231,-71717
chr2:190306156-190306541	chr2	+	190306171	190306573	True	NM_032168,NM_014585	chr2,chr2	+,-	WDR75,SLC40A1	-63,139014
chr8:41901776-41903425	chr8	+	41902008	41902577	True	NM_001134296,NM_001099412,NM_001099413,NM_006766	chr8,chr8,chr8,chr8	+,-,-,-	AP3M2,MYST3,MYST3,MYST3	107886,6990,6990,6990
chr20:44599320-44599836	chr20	+	44599349	44599881	True	NM_022104,NM_022095	chr20,chr20	+,-	PCIF1,ZNF335	-36083,1002
chr7:26193221-26193803	chr7	+	26193298	26193789	True	NM_002137,NM_004289	chr7,chr7	-,+	HNRNPA2B1,NFE2L3	46674,-1507
chr7:28450251-28450502	chr7	+	28450255	28450441	True	NM_182898,NM_175061	chr7,chr7	+,-	CREB5,JAZF1	1702,-229818
chr11:67485478-67485767	chr11	+	67485531	67485767	True	NM_007103,NM_001031615	chr11,chr11	+,-	NDUFV1,ALDH3B2	-111263,-36846
chr3:75713276-75714023	chr3	+	75713275	75713991	True	NR_037925,NM_001124759,NM_001128223	chr3,chr3,chr3	+,+,-	FLJ20518,FRG2C,ZNF717	-55,-49,120314
chr13:41707008-41708741	chr13	+	41707021	41708528	True	NM_007187,NM_152903	chr13,chr13	+,-	WBP4,KBTBD6	-71375,-85
chr3:68981864-68982192	chr3	+	68981943	68982126	True	NM_006407,NM_001005527,NM_182522	chr3,chr3,chr3	+,-,-	ARL6IP5,FAM19A4,FAM19A4	151963,-232,-232
chr1:153437707-153438459	chr1	+	153437733	153438489	True	NM_002963,NM_176823	chr1,chr1	-,+	S100A7,S100A7A	-4596,-48784
chr1:153437707-153438459	chr1	-	153378022	153378072	False	NM_176823,NM_002964	chr1,chr1	+,-	S100A7A,S100A8	10927,-14358
chr18:72917445-72919066	chr18	+	72917586	72918833	True	NM_005786,NM_175907	chr18,chr18	+,-	TSHZ1,ZADH2	3897,2498
chr2:38303019-38303314	chr2	+	38303044	38303330	True	NR_027252,NM_000104	chr2,chr2	+,-	C2orf58,CYP1B1	54916,43
chr19:12993537-12994239	chr19	+	12993575	12994249	True	NM_006563,NM_001375,NM_000159,NM_013976	chr19,chr19,chr19,chr19	-,-,+,+	KLF1,DNASE2,GCDH,GCDH	3819,-1240,7724,7724
chr13:33591096-33591326	chr13	+	33591199	33591297	True	NM_004795,NM_178007	chr13,chr13	+,-	KL,STARD13	-679,168969
chr10:35378025-35378885	chr10	+	35378127	35378826	True	NM_001198777,NM_003591,NM_001881	chr10,chr10,chr10	-,-,+	CUL2,CUL2,CREM	801,542,36974
chr20:25064554-25064952	chr20	+	25064707	25064879	True	NM_014588,NM_001114089,NM_199425	chr20,chr20,chr20	-,+,-	VSX1,ENTPD6,VSX1	-1940,111459,-1940
chr4:2264957-2265376	chr4	+	2265152	2265422	True	NM_001193282,NM_006454	chr4,chr4	+,-	LOC402160,MXD4	155278,-1413
chr1:145509195-145510216	chr1	+	145509233	145510183	True	NR_002328,NM_005105,NM_003846,NM_001184795	chr1,chr1,chr1,chr1	-,+,+,+	GNRHR2,RBM8A,PEX11B,PEX11B	5943,-1727,5981,6376
chr1:145509195-145510216	chr14	+	60865021	60865972	False	NM_007374,NM_174978	chr14,chr14	+,-	SIX6,C14orf39	109965,86842
chr8:145702166-145702488	chr8	+	145702257	145702375	True	NM_003923,NM_145754	chr8,chr8	-,+	FOXH1,KIFC2	-539,-10570
chr7:66356956-66358113	chr7	+	66357377	66358162	True	NR_003934,NM_017994	chr7,chr7	-,+	LOC729156,C7orf42	-47564,28040
chrX:119030244-119031066	chrX	+	119030256	119030753	True	NM_178813,NM_006978,NM_001008535,NM_001008534	chrX,chrX,chrX,chrX	+,-,+,+	AKAP14,RNF113A,AKAP14,AKAP14	-371,-24465,-371,-371
chr16:56651513-56653092	chr16	+	56651582	56653108	True	NR_001447,NM_175617,NM_005950,NM_005953	chr16,chr16,chr16,chr16	+,+,-,+	MT1L,MT1E,MT1G,MT2A	-260,6476,48919,-9155
chr5:159792438-159793885	chr5	+	159792626	159793691	True	NM_031908,NM_004219	chr5,chr5	-,+	C1QTNF2,PTTG1	4014,55173
chr8:42950218-42951313	chr8	+	42950255	42951071	True	NR_027669,NM_032237	chr8,chr8	-,+	RNF170,SGK196	-198389,-1649
chr1:85160705-85161067	chr1	+	85160766	85160966	True	NR_036561,NM_001166293,NM_001166295,NM_001166294,NM_001166417,NM_014021	chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,-,-,-	SPATA1,SSX2IP,SSX2IP,SSX2IP,SSX2IP,SSX2IP	-188843,-4526,-4615,-4526,-4615,-4526
chr11:100564754-100565276	chr11	+	100564945	100565274	True	NM_001202474,NM_152432	chr11,chr11	-,+	PGR,ARHGAP42	434570,-6589
chr9:108016096-108016728	chr9	+	108016421	108016715	True	NM_080546,NM_005502	chr9,chr9	+,-	SLC44A1,ABCA1	-9543,-325894
chr9:6414306-6416090	chr9	+	6414378	6415974	True	NM_000170,NM_152896	chr9,chr9	-,+	GLDC,UHRF2	229768,-1285
chr11:111493271-111495154	chr11	+	111493273	111495131	True	NM_015191,NM_017589	chr11,chr11	+,-	SIK2,BTG4	-20154,-110209
chr22:27053567-27054150	chr22	+	27053577	27054179	True	NR_033321,NR_003491,NR_033320,NM_001887,NR_033319	chr22,chr22,chr22,chr22,chr22	+,+,+,-,+	MIAT,MIAT,MIAT,CRYBB1,MIAT	-182,-182,-182,-39586,-182
chr10:14996179-14997021	chr10	+	14996264	14996923	True	NM_001080836,NM_001033858,NM_022487,NM_001033857,NM_001033855	chr10,chr10,chr10,chr10,chr10	+,-,-,-,-	MEIG1,DCLRE1C,DCLRE1C,DCLRE1C,DCLRE1C	4514,-170,-170,-170,-170
chr6:167708218-167708698	chr6	+	167708234	167708596	True	NM_004610,NM_018974,NM_001143947	chr6,chr6,chr6	-,+,+	TCP10,UNC93A,UNC93A	89452,-3482,-3482
chr6:89827998-89828672	chr6	+	89828160	89828684	True	NM_001010853,NM_080743	chr6,chr6	+,-	PM20D2,SRSF12	27084,-360
chr1:40148799-40149004	chr1	+	40148879	40148939	True	NM_203456,NM_016257	chr1,chr1	+,-	PPIE,HPCAL4	55577,8200
chr12:44176675-44177348	chr12	+	44176721	44177021	True	NM_016123,NM_002822	chr12,chr12	+,-	IRAK4,TWF1	-24035,23217
chr14:54457458-54458910	chr14	+	54457462	54458750	True	NM_130850,NM_001130851	chr14,chr14	-,+	BMP4,CDKN3	-33908,404922
chr8:133769435-133769724	chr8	+	133769470	133769759	True	NM_001145153,NM_198513,NM_144649	chr8,chr8,chr8	-,+,-	TMEM71,PHF20L1,TMEM71	3206,17844,3206
chr6:35743959-35744301	chr6	+	35744143	35744257	True	NM_001010886,NM_207409,NM_001832	chr6,chr6,chr6	+,+,-	C6orf127,C6orf126,CLPS	4573,134,20895
chr14:92289786-92291469	chr14	+	92290035	92291334	True	NM_001128595,NM_017437	chr14,chr14	-,+	TC2N,CPSF2	11572,296963
chr5:112312969-112313486	chr5	+	112313113	112313532	True	NM_005669,NM_152624	chr5,chr5	-,+	REEP5,DCP2	-55082,-731
chr2:113825145-113826946	chr2	+	113825268	113826862	True	NM_032556,NM_173178,NM_173161,NM_173170,NM_012275	chr2,chr2,chr2,chr2,chr2	+,-,+,+,+	IL1F10,IL1F8,IL1F10,IL1F5,IL1F5	3032,-14828,2,-9104,-8634
chr3:32275015-32275286	chr3	+	32275041	32275193	True	NM_017784,NM_178868	chr3,chr3	-,+	OSBPL10,CMTM8	-251699,4977
chr4:119825496-119826647	chr4	+	119825514	119826571	True	NM_133477,NM_014822	chr4,chr4	+,-	SYNPO2,SEC24D	-15569,-68188
chr13:20134610-20134901	chr13	+	20134614	20134860	True	NM_199254,NM_017520	chr13,chr13	-,+	TPTE2,MPHOSPH8	-23711,72927
chr17:43595433-43596428	chr17_ctg5_hap1	-	1483733	1483799	False	NR_002940,NM_016632	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LRRC37A4,ARL17A	-2423,30151
chr17:43595433-43596428	chr17_ctg5_hap1	+	203772	203838	False	NM_001113738,NR_027782	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	ARL17A,PLEKHM1	-8118,-20558
chr17:43595433-43596428	chr17_ctg5_hap1	+	421692	421758	False	NM_001039083,NR_002940	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	ARL17B,LRRC37A4	-30147,2423
chr17:43595433-43596428	chr17	+	43595481	43596441	True	NR_002940,NR_037772	chr17,chr17	-,+	LRRC37A4,CRHR1	1498,101268
chr17:43595433-43596428	chr17	+	43591488	43592244	False	NR_002940,NR_037772	chr17,chr17	-,+	LRRC37A4,CRHR1	5695,105465
chr17:43595433-43596428	chr17	-	45127381	45127827	False	NM_203400,NM_054022	chr17,chr17	-,+	RPRML,GOSR2	-70767,-126946
chr17:43595433-43596428	chr17	-	44409026	44409092	False	NM_001103154,NM_014834	chr17,chr17	-,+	ARL17B,LRRC37A	30108,-36596
chr17:43595433-43596428	chr17	-	44626888	44626954	False	NM_001006607,NM_016632	chr17,chr17	+,-	LRRC37A2,ARL17A	-36879,30200
chr2:239198976-239200529	chr2	+	239199068	239200560	True	NM_001139490,NM_022817	chr2,chr2	+,-	TRAF3IP1,PER2	28624,-1861
chr1:32710736-32712049	chr1	+	32711365	32711895	True	NM_032648,NR_026850,NM_005356	chr1,chr1,chr1	+,-,+	FAM167B,MTMR9LP,LCK	922,-4054,4944
chr22:18255336-18255973	chr22	+	18255380	18255818	True	NM_001196,NR_036168,NM_197967,NM_197966,NM_015367	chr22,chr22,chr22,chr22,chr22	-,-,-,-,+	BID,MIR3198,BID,BID,BCL2L13	1490,-8355,1490,1011,-133946
chr6:75958097-75958467	chr6	+	75958454	75958520	True	NR_029466,NM_001100409,NM_001865	chr6,chr6,chr6	-,+,-	COX7A2,SENP6,COX7A2	-4810,353101,-4810
chr1:200990761-200991723	chr1	+	200990948	200991758	True	NM_001142569,NM_017596	chr1,chr1	+,-	C1orf106,KIF21B	-127000,1120
chr4:10117108-10117358	chr4	+	10117111	10117407	True	NM_005112,NM_017491,NM_000798	chr4,chr4,chr4	-,-,+	WDR1,WDR1,DRD5	1216,1216,-333904
chr1:27717485-27718090	chr1	+	27717484	27718040	True	NM_005281,NM_207397	chr1,chr1	+,-	GPR3,CD164L2	1111,-7679
chr12:53647761-53648021	chr12	+	53647801	53648057	True	NM_001170790,NM_032889,NM_000966	chr12,chr12,chr12	+,+,-	MFSD5,MFSD5,RARG	-2482,-1976,-21765
chrX:53078589-53078998	chrX	+	53078627	53078973	True	NM_018969,NM_014138	chrX,chrX	+,-	GPR173,FAM156A	-172,-92451
chr7:6588597-6590161	chr7	+	6588597	6590091	True	NM_001134387,NM_001145118	chr7,chr7	+,-	ZDHHC4,GRID2IP	26973,1038
chr11:69632745-69633054	chr11	+	69633026	69633100	True	NM_005247,NM_053056	chr11,chr11	-,+	FGF3,CCND1	1142,-177210
chr10:128590081-128591526	chr10	+	128590317	128591154	True	NM_001004298,NM_001380	chr10,chr10	-,+	C10orf90,DOCK1	-380307,2868
chr1:46687859-46688312	chr1	+	46687900	46688313	True	NM_001013615,NR_024332	chr1,chr1	+,-	C1orf190,POMGNT1	-18945,-1923
chr12:79258021-79258626	chr12	+	79258044	79258412	True	NM_001135805,NM_005639,NM_002583	chr12,chr12,chr12	+,+,-	SYT1,SYT1,PAWR	-322,36,826428
chr12:26282499-26283008	chr12	+	26282510	26283026	True	NM_001135823,NM_030762	chr12,chr12	+,-	SSPN,BHLHE41	65242,-4507
chr10:122214391-122215257	chr10	+	122214666	122215266	True	NM_001030059,NR_033850	chr10,chr10	+,-	PPAPDC1A,LOC283089	1199,395475
chr17:73903160-73903757	chr17	+	73903328	73903446	True	NM_001113324,NM_032478	chr17,chr17	+,-	C17orf106,MRPL38	71851,-2147
chr19:41280659-41281452	chr19	+	41280746	41281324	True	NR_037791,NM_198476,NM_006533,NR_037775,NM_001202553,NM_016154	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+	RAB4B-EGLN2,C19orf54,MIA,MIA-RAB4B,MIA,RAB4B	2799,-24918,-5,117,89,2799
chr1:41707619-41707916	chr1	+	41707684	41707818	True	NM_012236,NM_001172218,NM_001172219,NR_037868,NM_001172220	chr1,chr1,chr1,chr1,chr1	-,-,-,+,-	SCMH1,SCMH1,SCMH1,LOC100507178,SCMH1	47,47,47,-227473,47
chr20:56100178-56100586	chr20	+	56100180	56100481	True	NM_002591,NM_080618	chr20,chr20	+,-	PCK1,CTCFL	35655,-26
chrX:70338733-70340203	chrX	+	70339064	70340218	True	NM_000206,NM_005120	chrX,chrX	-,+	IL2RG,MED12	-7583,-709
chr13:21098675-21098988	chr13	+	21098814	21099006	True	NM_006531,NM_015974	chr13,chr13	+,-	IFT88,CRYL1	42201,1056
chr8:21965904-21966360	chr8	+	21966021	21966353	True	NM_024815,NM_022749	chr8,chr8	-,+	NUDT18,FAM160B2	629,-19358
chr4:125633190-125633404	chr4	+	125633235	125633297	True	NM_020337,NM_024582,NM_001167882	chr4,chr4,chr4	-,+,-	ANKRD50,FAT4,ANKRD50	640,604269,640
chr14:68067387-68067704	chr14	+	68067591	68067727	True	NM_001172,NM_004569	chr14,chr14	+,-	ARG2,PIGH	18851,-574
chr11:125754849-125756660	chr11	+	125754945	125756415	True	NM_145014,NM_001134793,NM_031307	chr11,chr11,chr11	+,+,-	HYLS1,HYLS1,PUS3	-1502,539,16751
chr5:137695009-137696351	chr5	+	137695304	137696117	True	NM_022809,NM_016604	chr5,chr5	-,+	CDC25C,KDM3B	-27788,-7077
chr2:110956478-110957554	chr2	+	110956610	110957541	True	NM_207181,NM_001128178,NM_001128179,NR_037626,NM_000272	chr2,chr2,chr2,chr2,chr2	-,-,-,+,-	NPHP1,NPHP1,NPHP1,LOC100507334,NPHP1	5157,5157,5157,45673,5157
chr19:20848410-20848871	chr19	+	20848413	20848629	True	NM_001076675,NR_034060,NM_145297	chr19,chr19,chr19	-,+,-	ZNF626,ZNF85,ZNF626	-4011,257429,-4011
chr13:95254136-95254374	chr13	+	95254136	95254400	True	NM_014305,NM_180989	chr13,chr13	-,+	TGDS,GPR180	-5625,-83
chr20:3063937-3064221	chr20	+	3064000	3064104	True	NM_000490,NM_000915	chr20,chr20	-,+	AVP,OXT	1316,-11785
chr9:131708514-131708751	chr9	+	131708518	131708714	True	NM_015354,NM_014908	chr9,chr9	+,-	NUP188,DOLK	1262,1348
chr15:48413953-48414442	chr15	+	48413974	48414420	True	NM_205850,NM_016132	chr15,chr15	+,-	SLC24A5,MYEF2	-857,56190
chrX:154289637-154290698	chrX	+	154289766	154290722	True	NM_001018024,NM_001018025,NM_001018055,NM_024332	chrX,chrX,chrX,chrX	-,-,+,+	MTCP1NB,MTCP1,BRCC3,BRCC3	8875,8875,8987,8987
chr19:56136418-56137175	chr19	+	56136521	56136860	True	NM_001195605,NM_203374	chr19,chr19	+,-	ZNF865,ZNF784	-11613,-580
chr19:42214670-42215147	chr19	+	42214707	42215155	True	NM_004363,NM_006890	chr19,chr19	+,-	CEACAM5,CEACAM7	-2235,-22611
chr2:219246068-219247356	chr2	+	219246385	219247271	True	NM_022152,NM_000578	chr2,chr2	-,+	TMBIM1,SLC11A1	-89105,176
chr17:41150882-41151257	chr17	+	41150944	41151162	True	NM_000988,NM_001142654,NM_005533	chr17,chr17,chr17	+,-,+	RPL27,AARSD1,IFI35	-549,-18399,7579
chr22:39351463-39352350	chr22	+	39351552	39352030	True	NM_014292,NM_001193289,NM_145699	chr22,chr22,chr22	-,+,+	CBX6,APOBEC3A,APOBEC3A	-83294,1496,1496
chr11:101918086-101918296	chr11	+	101918161	101918329	True	NM_178127,NM_032930,NM_001195005	chr11,chr11,chr11	-,+,+	ANGPTL5,C11orf70,C11orf70	-130908,-43,-43
chr2:87088528-87088741	chr2	+	87088528	87088590	True	NR_037931,NM_172101,NM_172102,NM_001178100,NM_172213,NM_004931	chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-	LOC100286979,CD8B,CD8B,CD8B,CD8B,CD8B	357,507,507,507,507,507
chr7:141619149-141619373	chr7	+	141619149	141619391	True	NM_013252,NM_001001656	chr7,chr7	-,+	CLEC5A,OR9A4	27442,-532
chr17:77476836-77477266	chr17	+	77476886	77477259	True	NM_178543,NM_001082575	chr17,chr17	+,-	ENPP7,RBFOX3	227622,1355
chr8:7321116-7322973	chr8	+	7321162	7322843	True	NM_080389,NM_001040702,NM_001040703,NM_016512,NM_058200,NM_058201,NM_058202,NM_058203	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,+,-,-,-,-,-	DEFB104A,DEFB104B,DEFB105B,SPAG11B,SPAG11B,SPAG11B,SPAG11B,SPAG11B	9816,9816,22399,30,30,30,30,30
chr8:7321116-7322973	chr8	-	7703750	7705431	False	NM_080389,NM_152250,NM_001081552,NM_001040702,NM_058203	chr8,chr8,chr8,chr8,chr8	+,-,+,+,+	DEFB104A,DEFB105A,SPAG11A,DEFB104B,SPAG11B	-9813,-22390,-30,-9813,-30
chr14:35336387-35337729	chr14	+	35336609	35337623	True	NR_002937,NM_182648,NM_013448	chr14,chr14,chr14	+,-,-	C14orf19,BAZ1A,BAZ1A	71504,7280,7280
chr7:158749993-158750236	chr7	+	158750057	158750203	True	NR_024394,NM_020728	chr7,chr7	+,-	LOC154822,ESYT2	50841,-127738
chr17:27055005-27055476	chr17	+	27055049	27055424	True	NR_024575,NR_024579,NM_001144943,NM_000984,NR_000014,NM_178170,NR_000010,NR_000013,NM_138463,NM_001142625,NM_001160407,NM_001142624,NR_000009	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,+,+,+,+,+,-,-,-,-,+	RAB34,RAB34,RAB34,RPL23A,SNORD42A,NEK8,SNORD4A,SNORD42B,TLCD1,RAB34,TLCD1,RAB34,SNORD4B	-9798,-9798,-9763,-8100,-4653,407,-5500,-7532,-1819,-9763,-1100,-9763,-4401
chr6:28129522-28131040	chr6	+	28129586	28130756	True	NR_002936,NM_001145129	chr6,chr6	-,+	LOC222699,ZNF389	56001,-86
chr1:55089722-55089957	chr1	+	55089837	55089983	True	NM_176782,NR_026782	chr1,chr1	-,+	FAM151A,HEATR8	-637,17443
chr8:37459677-37460237	chr8	+	37459714	37460280	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	93020,145334
chr4:4248632-4248973	chr4	+	4248808	4248936	True	NM_032927,NM_145291	chr4,chr4	-,+	TMEM128,ZBTB49	1048,42987
chr1:3542152-3543590	chr1	+	3542382	3543598	True	NM_001409,NM_182752	chr1,chr1	-,+	MEGF6,TPRG1L	-14323,-877
chr1:13736001-13737032	chr1	+	13736080	13737028	True	NM_001100114,NM_001099852,NM_001099850	chr1,chr1,chr1	+,+,-	PRAMEF21,PRAMEF20,PRAMEF18	5773,-54,-37675
chr1:13736001-13737032	chr1	+	13515240	13516187	False	NM_001100114,NM_001099852,NM_001099850	chr1,chr1,chr1	+,+,-	PRAMEF21,PRAMEF20,PRAMEF18	5775,-54,-37671
chr1:114300775-114301103	chr1	+	114300926	114301136	True	NR_037864,NM_006608	chr1,chr1	+,-	LOC100287722,PHTF1	98120,694
chr12:6933768-6935439	chr12	+	6933866	6935428	True	NM_014262,NM_031299,NM_019858,NM_014449	chr12,chr12,chr12,chr12	+,-,+,+	LEPREL2,CDCA3,GPR162,GPR162	2143,25078,-2954,-2954
chr10:51357808-51359169	chr10	+	51357947	51359177	True	NR_029388,NM_002443	chr10,chr10	-,+	LOC728407,MSMB	12191,190375
chr10:51357808-51359169	chr10	-	51635574	51636811	False	NM_001145262,NM_006327	chr10,chr10	+,-	NCOA4,TIMM23	-59342,-12238
chr10:51357808-51359169	chr10	+	51136509	51137230	False	NM_001077686,NM_182554	chr10,chr10	-,+	AGAP8,C10orf53	109364,-248876
chr17:3514152-3514717	chr17	+	3514200	3514520	True	NM_080704,NM_001031681	chr17,chr17	-,+	TRPV1,CTNS	-1495,25241
chr6:29360029-29362000	chr6_mcf_hap5	+	664403	664483	False	NM_013936,NM_030959	chr6_mcf_hap5,chr6_mcf_hap5	+,-	OR12D2,OR12D3	3114,-18014
chr6:29360029-29362000	chr6	+	29361078	29361158	True	NM_013936,NM_030959	chr6,chr6	+,-	OR12D2,OR12D3	3257,-18010
chr6:29360029-29362000	chr6_mann_hap4	+	664209	664289	False	NM_013936,NM_030959	chr6_mann_hap4,chr6_mann_hap4	+,-	OR12D2,OR12D3	3114,-18008
chr6:29360029-29362000	chr6_cox_hap2	+	880011	880091	False	NM_013936,NM_030959	chr6_cox_hap2,chr6_cox_hap2	+,-	OR12D2,OR12D3	3114,-18009
chr9:135224732-135226548	chr9	+	135224736	135226540	True	NM_207417,NM_015046	chr9,chr9	+,-	C9orf171,SETX	59070,3892
chr10:50823316-50824104	chr10	+	50823401	50824119	True	NM_000124,NM_020984,NM_001142934,NM_001142933,NM_001142929,NM_020549,NM_003055,NM_020985,NM_020986	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,+,+,+,+,+,+,+,+	ERCC6,CHAT,CHAT,CHAT,CHAT,CHAT,SLC18A3,CHAT,CHAT	-76254,-6311,-1369,-1369,-1369,-1369,-5105,-2298,-2298
chr17:56321539-56322102	chr17	+	56321538	56321816	True	NM_006151,NR_027647,NM_001160102,NM_001165927	chr17,chr17,chr17,chr17	+,+,+,-	LPO,LPO,LPO,MKS1	-5802,-5802,-5802,-24572
chr9:75533709-75533947	chr9	+	75533708	75533836	True	NM_000700,NM_000689	chr9,chr9	+,-	ANXA1,ALDH1A1	232944,34461
chrX:69508347-69508713	chrX	+	69508380	69508526	True	NM_012310,NM_016484,NM_001032726	chrX,chrX,chrX	+,-,+	KIF4A,PDZD11,RAB41	1352,1332,-6415
chr1:70670917-70671425	chr1	+	70670920	70671460	True	NM_017768,NM_004768,NM_001190987	chr1,chr1,chr1	-,+,+	LRRC40,SRSF11,SRSF11	-49,-96,-96
chr12:67660586-67660817	chr12	+	67660619	67660733	True	NM_021150,NM_018448	chr12,chr12	-,+	GRIP1,CAND1	-587694,2327
chr20:44163532-44163779	chr20	+	44163575	44163807	True	NM_080827,NM_006103	chr20,chr20	-,+	WFDC6,WFDC2	4377,-65233
chr4:155662519-155662814	chr4	+	155662546	155662810	True	NM_004744,NM_021870	chr4,chr4	+,-	LRAT,FGG	2352,-128644
chr20:24450874-24451572	chr20	+	24450924	24451595	True	NM_024893,NM_178311	chr20,chr20	+,-	TMEM90B,GGTLC1	-1140,-481508
chr19:44076507-44077130	chr19	+	44076506	44077002	True	NM_001193621,NM_001193622,NM_006297	chr19,chr19,chr19	+,+,-	LOC390940,LOC390940,XRCC1	3949,7693,2778
chr12:49243159-49245110	chr12	+	49243701	49244907	True	NM_004818,NM_000725	chr12,chr12	-,+	DDX23,CACNB3	1102,-31240
chr17:40348770-40349248	chr17	+	40348820	40348999	True	NM_001142622,NM_001142623,NM_032484,NR_024573,NM_033194	chr17,chr17,chr17,chr17,chr17	-,-,-,-,+	GHDC,GHDC,GHDC,GHDC,HSPB9	-2270,-2270,-2270,-2565,-74118
chr10:49891542-49892859	chr10	+	49891598	49892719	True	NM_020945,NM_021226	chr10,chr10	+,-	WDFY4,ARHGAP22	798,-78460
chr19:39303131-39303480	chr19	+	39303268	39303346	True	NM_006149,NM_001042507	chr19,chr19	-,+	LGALS4,LGALS7B	444,-23469
chr9:127114565-127115310	chr9	+	127114586	127115281	True	NM_002799,NR_027406	chr9,chr9	-,+	PSMB7,LOC100129034	62497,470
chr17:43511385-43511902	chr17_ctg5_hap1	+	126578	126884	False	NM_001113738,NM_174919,NM_199282	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	+,-,-	ARL17A,ARHGAP27,ARHGAP27	68836,-1171,-8442
chr17:43511385-43511902	chr17	+	43511516	43511822	True	NR_024435,NM_174919,NM_199282	chr17,chr17,chr17	+,-,-	LOC100133991,ARHGAP27,ARHGAP27	-172009,-1234,-8504
chr9:90394602-90396010	chr9	+	90395299	90396040	True	NR_027917,NM_001039803	chr9,chr9	+,-	CTSL3,CDK20	-7527,193709
chr19:10400745-10401078	chr19	+	10400998	10401066	True	NM_022377,NM_001544,NM_001039132,NM_003259,NM_001103167	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	ICAM4,ICAM4,ICAM4,ICAM5,ZGLP1	-3399,-3399,-3399,-394,19217
chr11:8008671-8008908	chr11	+	8008737	8008856	True	NM_003754,NM_176821	chr11,chr11	+,-	EIF3F,NLRP10	10,-23678
chr16:15243429-15244380	chr16	+	15243516	15243932	True	NM_015027,NR_037466	chr16,chr16	+,-	PDXDC1,MIR3180-4	-174734,4977
chr16:15243429-15244380	chr16	+	2180827	2181243	False	NM_001009944,NM_000296,NR_037467,NM_014353	chr16,chr16,chr16,chr16	-,-,-,+	PKD1,PKD1,MIR3180-5,RAB26	4706,4706,4937,17407
chr15:45695001-45695354	chr15	+	45695004	45695334	True	NM_001482,NM_024063,NR_027635	chr15,chr15,chr15	-,+,+	GATM,SPATA5L1,SPATA5L1	-24024,-536,-536
chr22:18560874-18561077	chr22	+	18560884	18561088	True	NM_001127649,NM_017929,NM_001199319,NM_001136004	chr22,chr22,chr22,chr22	+,+,+,-	PEX26,PEX26,PEX26,MICAL3	-175,-249,-249,-53559
chr1:809467-809925	chr10	-	93183	93233	True	NM_001164154,NM_177987,NM_006624	chr10,chr10,chr10	-,-,+	TUBB8,TUBB8,ZMYND11	2321,1995,87171
chr11:65151883-65153426	chr11	+	65151922	65153230	True	NM_031904,NM_182556,NM_001077241	chr11,chr11,chr11	+,-,-	FRMD8,SLC25A45,SLC25A45	810,-1780,-1780
chr2:233351808-233352208	chr2	+	233351859	233352117	True	NM_001631,NM_004826	chr2,chr2	+,-	ALPI,ECEL1	-31077,465
chr21:46974798-46975011	chr21	+	46974842	46975056	True	NM_130444,NM_194255	chr21,chr21	+,-	COL18A1,SLC19A1	-99469,-12457
chrX:152083696-152084413	chrX	+	152084026	152084428	True	NM_001178108,NM_001178109,NM_001178106,NM_001178107,NM_001178113,NM_007150,NM_001178110,NM_001103150	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,+,+,-	ZNF185,ZNF185,ZNF185,ZNF185,ZNF185,ZNF185,ZNF185,PNMA5	-1092,-1092,-1092,-1092,1980,-1092,-1092,76383
chr6:134368998-134370143	chr6	+	134369143	134370186	True	NM_004865,NM_145176	chr6,chr6	+,-	TBPL1,SLC2A12	-94893,3658
chr7:129593713-129594659	chr7	+	129593823	129594548	True	NM_182697,NM_001202498,NM_003344,NM_014997	chr7,chr7,chr7,chr7	-,-,-,+	UBE2H,UBE2H,UBE2H,KLHDC10	-1023,-1040,-1023,115800
chr18:14944643-14946093	chr18	+	14944750	14946126	True	NR_027417,NR_036153	chr18,chr18	-,+	LOC644669,MIR3156-2	379842,-114644
chr16:282879-283375	chr16	+	283007	283428	True	NM_201412,NM_018032,NM_032039	chr16,chr16,chr16	-,-,+	LUC7L,LUC7L,ITFG3	-3558,-3558,1372
chr22:28691429-28692245	chr22	+	28691583	28692261	True	NR_036169,NR_036170	chr22,chr22	-,+	MIR3199-1,MIR3199-2	-374983,-375120
chr12:7080070-7080594	chr12	+	7080076	7080426	True	NR_029779,NM_007273,NR_029682,NM_001144831,NR_003010,NM_006331	chr12,chr12,chr12,chr12,chr12,chr12	+,-,+,-,-,+	MIR200C,PHB2,MIR141,PHB2,SCARNA12,EMG1	-7265,-185,-6867,-160,-3307,-183
chr8:68259063-68259788	chr8	+	68259097	68259420	True	NM_024790,NM_006421	chr8,chr8	+,-	CSPP1,ARFGEF1	-282545,-3185
chr1:211848823-211849118	chr1	+	211848956	211849150	True	NR_026761,NM_002497,NM_001204182,NM_001204183	chr1,chr1,chr1,chr1	+,-,-,-	C1orf97,NEK2,NEK2,NEK2	-292910,-6,-6,-6
chr19:52133320-52133624	chr19	+	52133389	52133665	True	NM_007147,NM_003830	chr19,chr19	+,-	ZNF175,SIGLEC5	-58909,112
chr19:52133320-52133624	chr19	+	52149813	52150089	False	NR_029843,NM_001098612	chr19,chr19	+,-	MIR99B,SIGLEC14	45775,93
chr15:79164346-79165014	chr15	+	79164509	79164865	True	NM_014272,NM_206839,NM_006791	chr15,chr15,chr15	-,+,+	ADAMTS7,MORF4L1,MORF4L1	-60736,306,306
chr22:22091795-22092727	chr22	+	22091898	22092586	True	NM_013313,NM_148176	chr22,chr22	-,+	YPEL1,PPIL2	-1827,-71676
chr19:19315954-19316171	chr19	+	19316084	19316188	True	NM_176880,NM_004386	chr19,chr19	-,+	NR2C2AP,NCAN	-1846,6593
chr20:2855193-2855783	chr20	+	2855268	2855806	True	NM_022760,NM_080840	chr20,chr20	-,+	FAM113A,PTPRA	-33936,-1177
chr10:104153497-104153735	chr10	+	104153561	104153771	True	NM_001077493,NM_002502,NM_002779,NM_001077494	chr10,chr10,chr10,chr10	+,+,-,+	NFKB2,NFKB2,PSD,NFKB2	457,1660,25180,567
chr8:11660892-11661446	chr8	+	11660943	11661393	True	NM_004462,NM_001908	chr8,chr8	+,-	FDFT1,CTSB	-810,64309
chr4:104097847-104099415	chr4	+	104098617	104099453	True	NM_001813,NM_001008388	chr4,chr4	-,+	CENPE,CISD2	20163,-308540
chr15:72490634-72492027	chr15	+	72490633	72491939	True	NM_001012642,NM_145204	chr15,chr15	-,+	GRAMD2,SENP8	-497,-80053
chr11:31537512-31538332	chr11	+	31537685	31538376	True	NM_144981,NM_019040	chr11,chr11	-,+	IMMP1L,ELP4	-6516,-6446
chr16:27215145-27215435	chr16	+	27215166	27215432	True	NM_024773,NM_145080,NM_001145348	chr16,chr16,chr16	+,-,+	JMJD5,NSMCE1,JMJD5	-410,64731,-3
chr1:181452042-181452444	chr1	+	181452106	181452306	True	NM_005819,NM_000721	chr1,chr1	-,+	STX6,CACNA1E	-460060,409
chrX:100306332-100306550	chrX	+	100306336	100306562	True	NM_021637,NM_024917,NM_001167972,NM_001167971,NM_001167970	chrX,chrX,chrX,chrX,chrX	+,-,-,-,-	TMEM35,TRMT2B,TRMT2B,TRMT2B,TRMT2B	27273,593,593,593,593
chr11:394397-394616	chr11	+	394412	394656	True	NM_007183,NM_001135054	chr11,chr11	+,-	PKP3,SIGIRR	-246,20393
chr17:7242941-7243299	chr17	+	7243053	7243269	True	NM_032442,NM_014716	chr17,chr17	-,+	NEURL4,ACAP1	-10415,-3264
chr2:61403678-61404047	chr2	+	61403697	61404051	True	NM_152392,NR_036496	chr2,chr2	+,-	AHSA2,LOC339803	503,-31587
chr1:203320730-203321513	chr1	+	203320739	203321105	True	NM_002023,NM_006763	chr1,chr1	-,+	FMOD,BTG2	-450,-46126
chr5:70379909-70381217	chr5	+	70380268	70381157	True	NM_022877,NR_026578	chr5,chr5	+,-	SMN2,LOC647859	-159551,7790
chr5:70379909-70381217	chr5	-	68838392	68839281	False	NR_027439,NM_001098728	chr5,chr5	-,+	LOC100272216,GTF2H2C	89797,16769
chr1:87382971-87383366	chr1	+	87383214	87383423	True	NM_001134492,NM_004261,NM_012262,NM_203341	chr1,chr1,chr1,chr1	+,-,+,-	HS2ST1,SEP15,HS2ST1,SEP15	-2931,-3107,-2931,-3107
chr6:44235208-44236246	chr6	+	44235234	44236012	True	NM_001137560,NM_004556,NM_178148	chr6,chr6,chr6	+,-,-	TMEM151B,NFKBIE,SLC35B2	2467,-1709,-9951
chr9:28692192-28693110	chr9	+	28692602	28693146	True	NM_152570,NM_020124	chr9,chr9	-,+	LINGO2,IFNK	26207,-1168355
chr12:90009926-90010627	chr12	+	90009925	90010654	True	NM_001001323,NR_028138	chr12,chr12	-,+	ATP2B1,LOC338758	39241,92077
chr10:14878896-14879658	chr10	+	14879007	14879568	True	NM_016299,NM_001029954	chr10,chr10	+,-	HSPA14,CDNF	692,468
chr16:1666044-1666324	chr16	+	1666225	1666321	True	NM_020825,NM_014714	chr16,chr16	+,-	CRAMP1L,IFT140	-1644,-4116
chr19:508070-508888	chr19	+	508127	508877	True	NM_033513,NM_182577	chr19,chr19	+,-	C19orf20,ODF3L2	-681,-33144
chr12:125551086-125552238	chr12	+	125551560	125552092	True	NM_032656,NM_023928	chr12,chr12	-,+	DHX37,AACS	-77893,-1688
chr6:163836174-163836385	chr6	+	163836267	163836383	True	NM_206854,NM_206855,NM_006775,NR_037593,NM_206853	chr6,chr6,chr6,chr6,chr6	+,+,+,-,+	QKI,QKI,QKI,LOC100526820,QKI	-643,-643,-643,-1285,-643
chr7:38948802-38950119	chr7	+	38948899	38949970	True	NM_014396,NM_080631,NM_001166018	chr7,chr7,chr7	-,-,+	VPS41,VPS41,POU6F2	-99,-99,67638
chr4:2418605-2418880	chr4	+	2418662	2418892	True	NM_001193282,NM_001172656,NM_001172657,NM_001172658,NM_020972	chr4,chr4,chr4,chr4,chr4	+,-,-,-,-	LOC402160,ZFYVE28,ZFYVE28,ZFYVE28,ZFYVE28	1808,1528,1528,1528,1528
chr20:5893322-5894366	chr20	+	5893322	5894181	True	NM_001819,NM_015939	chr20,chr20	+,-	CHGB,TRMT6	-1407,37055
chr19:53794531-53795288	chr19	+	53794592	53795006	True	NM_001195187,NM_033341	chr19,chr19	+,-	LOC646508,BIRC8	-9832,-69
chr11:76960233-76961176	chr11	+	76960363	76960765	True	NM_182833,NM_001127180	chr11,chr11	-,+	GDPD4,MYO7A	37750,-121108
chr1:113926931-113928735	chr1	+	113927063	113928503	True	NM_006608,NM_152900,NM_001142782	chr1,chr1,chr1	-,+,+	PHTF1,MAGI3,MAGI3	373324,4971,4971
chr11:49229985-49230207	chr11	+	49230040	49230176	True	NM_001193471,NM_001014986,NM_001193473,NM_001193472,NR_027044,NM_004476	chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,+,-	FOLH1,FOLH1,FOLH1,FOLH1,LOC440040,FOLH1	96,96,96,96,349903,96
chr1:48351348-48352516	chr1	+	48351522	48352217	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	110406,336139
chr12:69345800-69346986	chr12	+	69345856	69346985	True	NM_001874,NM_002392	chr12,chr12	-,+	CPM,MDM2	10086,-143948
chr9:100883915-100884278	chr9	+	100883941	100884307	True	NM_018946,NM_014788,NM_033220,NM_033219	chr9,chr9,chr9,chr9	+,-,-,-	NANS,TRIM14,TRIM14,TRIM14	-65033,-2461,-2453,-2461
chr12:3862838-3864830	chr12	+	3862883	3864583	True	NM_001144958,NM_001144959,NM_032680,NM_019854	chr12,chr12,chr12,chr12	-,-,-,+	EFCAB4B,EFCAB4B,EFCAB4B,PRMT8	-517,-517,-517,-262509
chr19:7952312-7953052	chr19	+	7952318	7953094	True	NM_025061,NR_033250	chr19,chr19	+,-	LRRC8E,LOC388499	295,-7201
chr9:140474737-140475889	chr9	+	140474814	140475780	True	NM_152285,NM_138462,NM_138778	chr9,chr9,chr9	+,-,-	ARRDC1,ZMYND19,WDR85	24315,9207,-1427
chr4:57053369-57053957	chr4	+	57053533	57053957	True	NM_181806,NM_020722	chr4,chr4	-,+	AASDH,KIAA1211	199731,-17223
chr19:57089266-57089895	chr19	+	57089334	57089920	True	NM_001005850,NM_001001668	chr19,chr19	-,+	ZNF835,ZNF470	94376,-10495
chr2:26384996-26385967	chr2	+	26385030	26385891	True	NM_000182,NM_001168241	chr2,chr2	-,+	HADHA,FAM59B	81760,10068
chr19:13081653-13081961	chr19	+	13081787	13081989	True	NM_152654,NM_052850	chr19,chr19	+,-	DAND5,GADD45GIP1	-1406,-13737
chr17:48171915-48172223	chr17	+	48171944	48172200	True	NM_001199899,NM_001199898,NM_174920,NM_002611,NM_001199900	chr17,chr17,chr17,chr17,chr17	+,+,-,+,+	PDK2,PDK2,SAMD14,PDK2,PDK2	858,-32,35017,438,438
chr20:43150758-43151601	chr20	+	43150874	43151633	True	NM_198941,NM_007066,NM_006811,NM_181805,NM_181804	chr20,chr20,chr20,chr20,chr20	-,+,-,+,+	SERINC3,PKIG,SERINC3,PKIG,PKIG	-148,8802,-148,8802,8802
chr7:80528515-80529520	chr7	+	80528833	80529391	True	NM_006379,NM_001127444	chr7,chr7	-,+	SEMA3C,CD36	19338,-253133
chr3:143558951-143560895	chr3	+	143559051	143560533	True	NM_173653,NM_173552	chr3,chr3	-,+	SLC9A9,C3orf58	6891,130106
chr22:29998860-29999208	chr22	+	29998979	29999199	True	NM_016418,NM_003634,NM_181825,NM_181832,NM_181833,NM_181830,NM_181831,NM_000268,NM_181829,NM_181828	chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22	+,-,+,+,+,+,+,+,+,+	NF2,NIPSNAP1,NF2,NF2,NF2,NF2,NF2,NF2,NF2,NF2	345,-21653,345,345,345,345,345,345,345,345
chr14:103853988-103854359	chr14	+	103854113	103854250	True	NM_001128918,NM_001128919,NM_001823,NM_001128920,NM_001128921,NM_002376	chr14,chr14,chr14,chr14,chr14,chr14	+,+,-,+,+,+	MARK3,MARK3,CKB,MARK3,MARK3,MARK3	-2464,-2464,134983,-2464,-2464,-2464
chrX:69263835-69264373	chrX	+	69263953	69264385	True	NM_001002254,NM_207320	chrX,chrX	-,+	AWAT2,OTUD6A	5453,17955
chr3:52350243-52351834	chr3	+	52350247	52351636	True	NM_015512,NR_029677	chr3,chr3	+,-	DNAH1,MIR135A1	37,-21923
chr5:79552950-79554111	chr5	+	79553004	79553772	True	NM_001174072,NM_178276,NM_001174071,NM_032567	chr5,chr5,chr5,chr5	-,-,-,+	SERINC5,SERINC5,SERINC5,SPZ1	-1106,-1106,-1106,62017
chr12:98983943-98984725	chr12	+	98983953	98984755	True	NM_005888,NR_003015,NM_002635,NM_213611,NM_201612	chr12,chr12,chr12,chr12,chr12	+,+,+,+,-	SLC25A3,SNORA53,SLC25A3,SLC25A3,IKBIP	2647,8657,2647,2647,53888
chr4:71568141-71570079	chr4	+	71568574	71570047	True	NM_144646,NM_001130709	chr4,chr4	-,+	IGJ,RUFY3	-36226,606
chr14:50779870-50781518	chr14	+	50779958	50781298	True	NR_033761,NM_024884,NM_001003805,NM_001003803,NM_015684	chr14,chr14,chr14,chr14,chr14	+,-,+,+,+	ATP5S,L2HGDH,ATP5S,ATP5S,ATP5S	-964,-1011,-964,-964,-964
chr6:99281564-99282112	chr6	+	99281608	99281998	True	NM_005604,NM_012160	chr6,chr6	+,-	POU3F2,FBXL4	581,113901
chr2:219264023-219264246	chr2	+	219264067	219264269	True	NM_022152,NM_021198,NR_029500,NM_182642	chr2,chr2,chr2,chr2	-,+,+,+	TMBIM1,CTDSP1,MIR26B,CTDSP1	-106787,208,3099,544
chr17:42202058-42202356	chr17	+	42202209	42202365	True	NM_001015053,NM_001171251,NM_005474	chr17,chr17,chr17	-,+,-	HDAC5,C17orf53,HDAC5	-1195,16908,-1195
chr17:39157347-39158443	chr17	+	39157441	39158419	True	NM_031959,NM_031958,NM_033061,NM_033185	chr17,chr17,chr17,chr17	-,-,+,-	KRTAP3-2,KRTAP3-1,KRTAP4-7,KRTAP3-3	-1303,7005,82039,-7056
chr11:67141824-67142114	chr11	+	67141841	67142041	True	NM_001166212,NM_004584,NM_013246	chr11,chr11,chr11	-,+,-	CLCF1,RAD9A,CLCF1	-193,17381,-635
chr12:110939136-110939521	chr12	+	110939204	110939512	True	NM_016226,NM_152442,NM_057180	chr12,chr12,chr12	-,+,-	VPS29,RAD9B,VPS29	454,492,454
chr1:197168175-197169883	chr1	+	197168200	197169809	True	NM_001193640,NM_194314	chr1,chr1	+,-	CRB1,ZBTB41	67524,-76
chr15:25203012-25204266	chr15	+	25203016	25204317	True	NM_003097,NM_022804,NM_130838,NM_005678	chr15,chr15,chr15,chr15	+,+,-,+	SNRPN,SNURF,UBE3A,SNURF	-2932,-2997,446391,-2932
chr1:153414093-153416027	chr1	+	153414101	153416027	True	NM_001045479,NM_176823	chr1,chr1	-,+	S100A7L2,S100A7A	-1598,-25152
chr1:209956835-209958008	chr1	+	209956959	209957987	True	NM_025228,NM_152485	chr1,chr1	+,-	TRAF3IP3,C1orf74	-27616,-47
chr14:35011821-35012250	chr14	+	35012066	35012280	True	NM_018453,NR_002937	chr14,chr14	-,+	EAPP,C14orf19	-3123,396847
chr14:35011821-35012250	chr14	-	35029246	35029460	False	NM_018453,NR_002937	chr14,chr14	-,+	EAPP,C14orf19	-20303,379667
chr1:68856760-68858035	chr1	+	68857701	68858029	True	NM_000329,NM_001924	chr1,chr1	-,+	RPE65,GADD45A	57663,-706894
chr3:43028716-43029951	chr3	+	43029166	43029935	True	NM_004391,NM_001129908	chr3,chr3	-,+	CYP8B1,FAM198A	-111533,-8460
chr19:58952226-58953443	chr19	+	58952270	58953342	True	NM_207395,NM_003433	chr19,chr19	+,-	ZNF324B,ZNF132	9628,-681
chr19:1323275-1323605	chr19	+	1323474	1323630	True	NR_027271,NM_032853	chr19,chr19	-,+	C19orf23,MUM1	-53215,31345
chr15:41851967-41853113	chr15	+	41852039	41853015	True	NM_015540,NM_006293	chr15,chr15	-,+	RPAP1,TYRO3	-15575,-870
chr12:105724738-105724978	chr12	+	105724822	105724882	True	NM_018171,NM_001145199	chr12,chr12	-,+	APPL2,C12orf75	-94814,-459
chr22:19138424-19140191	chr22	+	19138810	19139774	True	NM_005315,NM_053006,NM_022719	chr22,chr22,chr22	-,+,-	GSC2,TSSK2,DGCR14	-1014,-20540,-6620
chr14:105191028-105191307	chr14	+	105191031	105191267	True	NM_199165,NM_005163,NM_152328	chr14,chr14,chr14	+,-,+	ADSSL1,AKT1,ADSSL1	4960,68721,-548
chr19:30202470-30203032	chr19	+	30202543	30202929	True	NM_001031726,NM_024310,NM_031448	chr19,chr19,chr19	-,+,-	C19orf12,PLEKHF1,C19orf12	3085,-46268,3574
chr4:100007980-100008254	chr4	+	100008110	100008236	True	NM_000671,NR_037884	chr4,chr4	-,+	ADH5,LOC100507053	1753,1771
chr1:226002910-226003248	chr1	+	226003237	226003297	True	NM_000120,NM_001136018,NM_014698	chr1,chr1,chr1	+,+,-	EPHX1,EPHX1,TMEM63A	9704,-5491,67173
chr20:33417671-33418738	chr20	+	33417855	33418187	True	NR_002165,NR_028046,NM_014071	chr20,chr20,chr20	-,+,-	HMGB3P1,ACSS2,NCOA6	4128,44578,-4422
chr1:949891-950310	chr1	+	949893	950255	True	NM_005101,NM_001142467,NM_198576	chr1,chr1,chr1	+,-,+	ISG15,HES4,AGRN	-1097,-14341,5247
chr17:73178937-73179212	chr17	+	73179083	73179167	True	NM_001005849,NM_024844,NM_006937	chr17,chr17,chr17	-,+,-	SUMO2,NUP85,SUMO2	-3,22429,-3
chr6:152017461-152019154	chr6	+	152017764	152018609	True	NM_017909,NM_001122742	chr6,chr6	-,+	RMND1,ESR1	-244448,-6184
chr16:28618524-28619192	chr16	+	28618694	28618768	True	NM_177529,NM_138414,NM_177530,NM_001055,NM_177534	chr16,chr16,chr16,chr16,chr16	-,+,-,-,-	SULT1A1,CCDC101,SULT1A1,SULT1A1,SULT1A1	2639,-53496,1931,2639,1931
chr3:39850407-39850651	chr3	+	39850492	39850650	True	NR_033965,NM_015460	chr3,chr3	-,+	FLJ33065,MYRIP	500589,652
chr19:34398067-34398402	chr19	+	34398087	34398448	True	NM_001166057,NM_024076	chr19,chr19	-,+	PEPD,KCTD15	-385288,-110387
chr2:28614169-28614571	chr2	+	28614223	28614593	True	NM_017910,NM_005253	chr2,chr2	-,+	TRMT61B,FOSL2	478632,1185
chr20:55842818-55843645	chr20	+	55843056	55843646	True	NM_012444,NM_001719	chr20,chr20	+,-	SPO11,BMP7	61184,-1349
chr10:104221876-104222585	chr10	+	104221993	104222623	True	NM_024789,NM_024886	chr10,chr10	+,-	TMEM180,C10orf95	-877,-10693
chr1:205408144-205408923	chr1	+	205408177	205408895	True	NM_002596,NR_029893	chr1,chr1	+,-	CDK18,MIR135B	64788,8681
chr6:43400709-43401943	chr6	+	43400736	43401934	True	NM_023932,NM_033450,NM_001198934	chr6,chr6,chr6	-,+,+	DLK2,ABCC10,ABCC10	21402,-1298,-5495
chr11:129900290-129901545	chr11	+	129900424	129901202	True	NM_199437,NR_024233	chr11,chr11	-,+	PRDM10,NCRNA00167	-27694,-27956
chr13:97536143-97537601	chr13	+	97536183	97537489	True	NM_144778,NM_080818	chr13,chr13	+,-	MBNL2,OXGR1	337084,109165
chr12:31479366-31480070	chr12	+	31479558	31479949	True	NM_021238,NR_026806,NM_001135812,NM_001135811	chr12,chr12,chr12,chr12	-,+,-,-	FAM60A,FLJ13224,FAM60A,FAM60A	-437,-2364,-399,-437
chr7:38651969-38653631	chr7	+	38652055	38653395	True	NM_001635,NM_001166018	chr7,chr7	-,+	AMPH,POU6F2	17827,364213
chr12:6580915-6581753	chr12	+	6581206	6581662	True	NM_018009,NM_014231,NM_016830,NM_199245	chr12,chr12,chr12,chr12	+,-,-,-	TAPBPL,VAMP1,VAMP1,VAMP1	-20080,-1363,-1363,-1363
chr2:174665123-174665790	chr2	+	174665157	174665827	True	NM_145810,NM_001017371	chr2,chr2	+,-	CDCA7,SP3	-445656,163170
chr5:132007677-132008193	chr5	+	132007985	132008071	True	NM_007054,NM_172348,NM_000589	chr5,chr5,chr5	-,+,+	KIF3A,IL4,IL4	65246,1301,1301
chr12:72057784-72058649	chr12	+	72057937	72058684	True	NM_031435,NM_144982	chr12,chr12	+,-	THAP2,ZFC3H1	-311,-188
chr19:33567377-33567938	chr19	+	33567505	33567592	True	NM_033103,NM_018025	chr19,chr19	-,+	RHPN2,GPATCH1	-11681,4193
chr4:122776324-122777628	chr4	+	122776498	122777545	True	NM_005033,NM_176824	chr4,chr4	+,-	EXOSC9,BBS7	-54085,14169
chr7:56174388-56175223	chr7	+	56174464	56174960	True	NM_015411,NM_016139,NM_001145712	chr7,chr7,chr7	+,-,-	SUMF2,CHCHD2,LOC389493	-42598,-277,9180
chr11:109294763-109295353	chr11	+	109294911	109295368	True	NM_015065,NM_207645	chr11,chr11	-,+	EXPH5,C11orf87	-830537,-2116
chr6:18156501-18157002	chr6	+	18156561	18156835	True	NM_000367,NM_153042	chr6,chr6	-,+	TPMT,KDM1B	-1187,-993
chr5:154200967-154201571	chr5	+	154201023	154201182	True	NM_004779,NM_032385	chr5,chr5	+,-	CNOT8,C5orf4	37015,29082
chr8:38087848-38088131	chr8	+	38087978	38088046	True	NM_001164232,NM_015214,NM_001164234,NM_001102559	chr8,chr8,chr8,chr8	+,+,+,-	DDHD2,DDHD2,DDHD2,PPAPDC1B	1424,962,962,38742
chr5:96519436-96519848	chr5	+	96519449	96519771	True	NM_001159749,NM_018343,NM_175920	chr5,chr5,chr5	-,-,+	RIOK2,RIOK2,LNPEP	-444,-444,-225344
chr1:120342270-120342728	chr1	+	120342366	120342694	True	NM_001159352,NM_006623	chr1,chr1	-,+	REG4,PHGDH	11559,-87998
chr12:6880134-6881627	chr12	+	6880217	6881361	True	NM_002286,NR_026581,NM_002824	chr12,chr12,chr12	+,-,+	LAG3,MLF2,PTMS	308,-17581,-4727
chr6:88298976-88299626	chr6	+	88299101	88299675	True	NM_020320,NM_181837,NM_012381,NM_001197259	chr6,chr6,chr6,chr6	-,+,+,+	RARS2,ORC3,ORC3,ORC3	110,109,109,109
chr2:30462124-30462884	chr2	+	30462142	30462896	True	NM_004304,NM_030915	chr2,chr2	-,+	ALK,LBH	-317665,-7796
chr3:172432693-172433554	chr3	+	172432812	172433580	True	NM_001146278,NM_020792,NM_018098,NM_001146277,NM_001146276	chr3,chr3,chr3,chr3,chr3	-,-,+,-,-	NCEH1,NCEH1,ECT2,NCEH1,NCEH1	-3804,-3804,38717,-3804,-3804
chr9:39815062-39815934	chr9	+	39815105	39815947	True	NR_003528,NM_001085452	chr9,chr9	-,+	LOC653501,FAM75A1	-350579,69027
chr9:39815062-39815934	chr9	-	65578407	65578979	False	NR_024496,NM_015667	chr9,chr9	+,-	LOC442421,FAM75A7	915289,-68797
chr9:39815062-39815934	chr9	-	43687162	43687482	False	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	-56432,-2328
chr9:39815062-39815934	chr9	+	39286215	39286697	False	NM_033655,NM_001085452	chr9,chr9	-,+	CNTNAP3,FAM75A1	1653,69001
chr9:39815062-39815934	chr9	+	40632196	40632272	False	NM_001083124,NM_033160	chr9,chr9	+,-	FAM75A3,ZNF658	68018,159890
chr9:39815062-39815934	chr9	+	41431381	41431953	False	NM_015667	chr9	+	FAM75A7	68725
chr22:20194761-20195424	chr22	+	20194783	20195303	True	NR_026919,NR_031618	chr22,chr22	+,-	LOC150197,MIR1286	-983,41481
chr12:121476693-121477376	chr12	+	121476773	121477336	True	NM_198213,NM_003733,NM_000545	chr12,chr12,chr12	-,-,+	OASL,OASL,HNF1A	7,7,-60275
chr18:61638939-61639215	chr18	+	61638964	61639186	True	NM_198833,NR_027245,NM_002640,NM_001031848	chr18,chr18,chr18,chr18	+,-,+,+	SERPINB8,C18orf20,SERPINB8,SERPINB8	-1764,177124,-1764,-1764
chr12:57485582-57486037	chr12	+	57485635	57485891	True	NM_015257,NM_005967	chr12,chr12	-,+	TMEM194A,NAB2	-13061,-3009
chrX:133912388-133912933	chrX	+	133912620	133912851	True	NM_001170780,NM_001170756	chrX,chrX	+,-	FAM122C,FAM122B	17591,17597
chr9:116919105-116919685	chr9	+	116919376	116919722	True	NM_138424,NM_032888	chr9,chr9	-,+	KIF12,COL27A1	-58039,-1196
chr16:30536270-30536606	chr16	+	30536281	30536553	True	NM_023931,NM_024671,NM_002209	chr16,chr16,chr16	-,-,+	ZNF747,ZNF768,ITGAL	9691,1407,-52349
chr4:66534349-66535307	chr4	+	66534360	66535109	True	NR_034138,NM_182472,NM_004439	chr4,chr4,chr4	+,-,-	LOC100144602,EPHA5,EPHA5	569,594,594
chr9:140485976-140486418	chr9	+	140486112	140486298	True	NM_152285,NM_138462	chr9,chr9	+,-	ARRDC1,ZMYND19	13797,-1175
chr2:137751362-137751856	chr2	+	137751437	137751862	True	NM_001080427,NM_003467	chr2,chr2	+,-	THSD7B,CXCR4	-3042,-875712
chr3:38081692-38082899	chr3	+	38081755	38082298	True	NM_006225,NM_007335,NM_007337	chr3,chr3,chr3	-,+,+	PLCD1,DLEC1,DLEC1	-10601,-1111,-1111
chr3:11761317-11761549	chr3	+	11761377	11761521	True	NM_014667,NM_003178	chr3,chr3	-,+	VGLL4,SYN2	749,284340
chr14:105194731-105194965	chr14	+	105194737	105195013	True	NM_199165,NM_005163,NM_152328	chr14,chr14,chr14	+,-,+	ADSSL1,AKT1,ADSSL1	1214,64975,-4254
chr2:135626451-135626873	chr2	+	135626478	135626733	True	NM_138326,NR_036549	chr2,chr2	+,-	ACMSD,LOC100129961	-30344,49504
chr7:140912050-140913708	chr7	+	140912116	140913666	True	NM_053035,NM_001195278	chr7,chr7	-,+	MRPS33,LOC100131199	-197335,-138135
chr7:76109187-76109742	chr7	+	76109207	76109743	True	NR_003262,NM_001102596	chr7,chr7	-,+	FDPSL2A,DTX2	-4890,83
chr7:76109187-76109742	chr7	+	76607376	76607850	False	NR_023383,NM_006682	chr7,chr7	+,-	PMS2P11,FGL2	2288,221350
chr10:23003039-23003241	chr10	+	23003127	23003243	True	NM_005028,NM_173081	chr10,chr10	-,+	PIP4K2A,ARMC3	310,213710
chr3:195273302-195274531	chr3	+	195273487	195274298	True	NR_003265,NM_006241	chr3,chr3	+,-	SDHAP2,PPP1R2	110611,-3263
chr19:48258043-48258500	chr19	+	48258055	48258323	True	NM_015710,NM_198479,NR_003048	chr19,chr19,chr19	+,-,+	GLTSCR2,TPRX1,SNORD23	-9313,48588,786
chr2:234829799-234830611	chr2	+	234829858	234830669	True	NM_024080,NR_024322	chr2,chr2	+,-	TRPM8,MSL3P1	-3872,-52803
chr1:212874230-212874632	chr1	+	212874279	212874666	True	NM_153606,NM_018664	chr1,chr1	+,-	FAM71A,BATF3	-76541,-952
chr19:778855-779060	chr19	+	778936	779078	True	NM_024888,NM_002819	chr19,chr19	-,+	LPPR3,PTBP1	42924,18313
chr6:15089654-15090277	chr6	+	15089703	15090275	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	156251,573064
chr3:46720770-46721154	chr3	+	46720839	46721203	True	NM_182775,NM_147196	chr3,chr3	-,+	ALS2CL,TMIE	-1940,21619
chr5:37841515-37842145	chr5	+	37841619	37842182	True	NM_152403,NM_000514,NM_001190469,NM_001190468,NM_199231	chr5,chr5,chr5,chr5,chr5	+,-,-,-,-	EGFLAM,GDNF,GDNF,GDNF,GDNF	416350,-1837,-5690,-5690,-6026
chr5:612959-613639	chr5	+	612986	613340	True	NM_007030,NM_018140	chr5,chr5	-,+	TPPP,CEP72	80220,-632
chr7:130329786-130330327	chr7	+	130330017	130330357	True	NM_012133,NR_029899	chr7,chr7	-,+	COPG2,MIR335	23291,-194116
chr19:12623775-12624210	chr19	+	12623983	12624208	True	NM_152601,NM_153358	chr19,chr19	-,+	ZNF709,ZNF791	-28351,97523
chrX:99986748-99986948	chrX	+	99986752	99986996	True	NM_080737,NM_014467,NM_001129896,NM_001174068	chrX,chrX,chrX,chrX	-,+,-,-	SYTL4,SRPX2,SYTL4,SYTL4	-230,-87640,189,-230
chr20:34739743-34740985	chr20	+	34740048	34741035	True	NM_012156,NR_027451	chr20,chr20	+,-	EPB41L1,LOC647979	1626,-101166
chr1:155911703-155912447	chr1	+	155911836	155912396	True	NM_014949,NM_181885	chr1,chr1	-,+	KIAA0907,RXFP4	-7648,-407
chr1:1282826-1283098	chr1	+	1282911	1282990	True	NM_152228,NM_004421	chr1,chr1	+,-	TAS1R3,DVL1	-16236,1559
chr17:40993971-40994647	chr17	+	40994094	40994532	True	NM_001158,NM_003734,NM_176863,NM_009590,NM_005789,NM_003766	chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,-	AOC2,AOC3,PSME3,AOC2,PSME3,BECN1	2076,8668,-8722,2076,-8722,-17784
chr7:32104905-32106884	chr7	+	32105187	32106826	True	NM_006658,NM_001191057,NM_001191056,NM_001191059,NM_005020	chr7,chr7,chr7,chr7,chr7	+,-,-,-,-	C7orf16,PDE1C,PDE1C,PDE1C,PDE1C	-378607,3709,3709,4223,4288
chr9:115096505-115097053	chr9	+	115096504	115097054	True	NM_005156,NM_001163788,NM_001195822,NM_001163790	chr9,chr9,chr9,chr9	-,-,+,-	ROD1,ROD1,HSDL2,ROD1	-560,-560,45134,-560
chr19:56686797-56687476	chr19	+	56686906	56687240	True	NM_001145546,NM_001080456,NM_033106	chr19,chr19,chr19	+,-,+	GALP,ZSCAN5B,GALP	148,17231,148
chr3:39851986-39853292	chr3	+	39852062	39853306	True	NR_033965,NM_015460	chr3,chr3	-,+	FLJ33065,MYRIP	497933,-810
chrX:151617272-151618071	chrX	+	151617304	151618014	True	NM_000808,NM_018558	chrX,chrX	-,+	GABRA3,GABRQ	1874,188622
chr10:27149054-27149266	chr10	+	27149186	27149300	True	NM_001178119,NM_005470,NM_001178116,NM_001178120,NM_001178121,NM_001178122,NM_001178123,NM_001178124,NM_001178125,NM_014317,NM_001012750,NM_001012751,NM_001012752	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,-,-,-,-,-,+,-,-,-	ABI1,ABI1,ABI1,ABI1,ABI1,ABI1,ABI1,ABI1,ABI1,PDSS1,ABI1,ABI1,ABI1	766,766,766,766,766,766,766,766,766,-162642,766,766,766
chr19:58448919-58449969	chr19	+	58448918	58449768	True	NM_133460,NR_036508,NM_005773	chr19,chr19,chr19	-,+,-	ZNF418,LOC100128398,ZNF256	-2178,64493,9360
chr20:24972973-24973194	chr20	+	24972978	24973190	True	NM_003650,NM_020531	chr20,chr20	+,-	CST7,C20orf3	-43163,285
chr8:94967347-94968290	chr8	+	94967387	94967830	True	NM_203390,NM_001161778	chr8,chr8	-,+	RBM12B,PDP1	-214163,-37446
chr22:32025967-32026272	chr22	+	32026057	32026319	True	NM_001007188,NM_014338	chr22,chr22	+,-	DEPDC5,PISD	123749,541
chr20:25176155-25176397	chr20	+	25176155	25176265	True	NR_027091,NM_001114089,NM_001247	chr20,chr20,chr20	-,+,+	LOC284798,ENTPD6,ENTPD6	-46729,73,73
chr2:38604640-38605335	chr2	+	38604788	38605379	True	NM_001135673,NR_027252,NR_024191,NM_022374	chr2,chr2,chr2,chr2	-,+,-,-	ATL2,C2orf58,ATL2,ATL2	-356,-246592,-356,-356
chr5:712032-712472	chr5	+	712108	712488	True	NM_018140,NM_007030	chr5,chr5	+,-	CEP72,TPPP	-99754,-18598
chr5:712032-712472	chr5	+	796406	796786	False	NM_001166260,NM_024786	chr5,chr5	+,-	TRIP13,ZDHHC11	96182,54365
chr4:153437405-153439231	chr4	+	153437668	153439020	True	NM_033632,NR_033797	chr4,chr4	-,+	FBXW7,DKFZP434I0714	17211,18395
chr13:30411921-30413784	chr13	+	30412099	30413440	True	NM_007106,NR_033889	chr13,chr13	-,+	UBL3,LOC440131	11438,97227
chr2:241806587-241807641	chr2	+	241806625	241807662	True	NM_024861,NM_000030	chr2,chr2	-,+	C2orf54,AGXT	23840,499
chrX:131340113-131340941	chrX	+	131340285	131340970	True	NM_021183,NM_001042452	chrX,chrX	-,+	RAP2C,MST4	11274,-182700
chr10:52420038-52421688	chr10	+	52420330	52421729	True	NM_147156,NM_001079516	chr10,chr10	-,+	SGMS1,ASAH2B	-36593,77978
chr10:52420038-52421688	chr10	+	81445286	81445336	False	NR_027512,NM_001098668	chr10,chr10	+,-	LOC650623,SFTPA2	-2606,-125123
chr6:33385723-33386133	chr6	+	33385787	33386079	True	NM_002636,NM_001014838,NM_006772,NM_001014433,NM_001014837,NM_001014840,NM_024165,NR_027692,NM_015921	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	+,-,+,-,-,-,+,+,-	PHF1,CUTA,SYNGAP1,CUTA,CUTA,CUTA,PHF1,PHF1,CUTA	-7065,36,1767,36,36,36,-7065,-7065,36
chr6:33385723-33386133	chr6_ssto_hap7	+	4866033	4866325	False	NM_002636,NM_001014838,NM_006772,NM_001014433,NM_001014837,NM_001014840,NM_024165,NR_027692	chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7	+,-,+,-,-,-,+,+	PHF1,CUTA,SYNGAP1,CUTA,CUTA,CUTA,PHF1,PHF1	-7063,36,1767,36,36,36,-7063,-7063
chr1:248569105-248569858	chr1	+	248569109	248569880	True	NM_030904,NM_001004691	chr1,chr1	+,-	OR2T1,OR2M7	106,-81239
chr9:19036469-19038111	chr9	+	19037245	19037954	True	NM_153707,NM_006570	chr9,chr9	-,+	FAM154A,RRAGA	-3989,11417
chr11:117747709-117748426	chr11	+	117747718	117748320	True	NM_001164837,NM_001204268,NM_022003,NM_001164832,NM_001164831,NM_001164836,NR_037907,NM_001558	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,-,-,-,+	FXYD6,FXYD6-FXYD2,FXYD6,FXYD6,FXYD6,FXYD6,FXYD6-FXYD2,IL10RA	-24,-24,-24,-24,-11,-24,-24,108785
chr4:4287844-4288464	chr4	+	4287882	4288298	True	NM_017816,NM_145291,NM_001145725	chr4,chr4,chr4	-,+,-	LYAR,ZBTB49,LYAR	3656,3625,3508
chr2:201828022-201828237	chr2	+	201828128	201828266	True	NR_033915,NM_001142356,NM_006190	chr2,chr2,chr2	-,+,-	ORC2,NIF3L1,ORC2	208,-71538,208
chr14:50104946-50105930	chr14	+	50105145	50105794	True	NM_002408,NM_018139,NM_001083908	chr14,chr14,chr14	+,-,-	MGAT2,C14orf104,C14orf104	-17707,-3197,-3197
chr9:116108405-116108809	chr9	+	116108658	116108847	True	NM_001012361,NM_145241,NM_017688	chr9,chr9,chr9	-,-,+	WDR31,WDR31,BSPRY	-6038,-6038,2964
chr22:37882203-37882430	chr22	+	37882346	37882430	True	NM_001166343,NM_152243,NR_029413,NM_002405	chr22,chr22,chr22,chr22	-,+,-,-	MFNG,CDC42EP1,MFNG,MFNG	45,74040,98,98
chr7:45128777-45129179	chr7	+	45128789	45129227	True	NM_001146334,NM_001029835	chr7,chr7	-,+	NACAD,CCM2	-296,-61607
chr7:102391519-102393010	chr7	+	102391831	102392448	True	NM_032959,NR_026879,NM_001145269,NM_001145268	chr7,chr7,chr7,chr7	-,+,+,+	POLR2J2,FAM185A,FAM185A,FAM185A	-79649,-2489,-2489,-2489
chr7:102391519-102393010	chr7	-	76748633	76749250	False	NM_020879,NM_006682	chr7,chr7	+,-	CCDC146,FGL2	2683,79956
chr1:203097125-203097364	chr1	+	203097164	203097238	True	NM_001048230,NM_000674,NM_002479	chr1,chr1,chr1	+,+,-	ADORA1,ADORA1,MYOG	-379,-379,-41787
chr12:56510865-56511727	chr12	+	56510865	56511754	True	NM_032786,NM_001035267,NM_001130420,NM_021104	chr12,chr12,chr12,chr12	+,+,-,+	ZC3H10,RPL41,SMARCC2,RPL41	275,-550,71647,-550
chr7:31740332-31741980	chr7	+	31740412	31741924	True	NM_022728,NM_006658	chr7,chr7	-,+	NEUROD6,C7orf16	-359874,-13839
chr9:123755791-123756187	chr9	+	123755990	123756172	True	NM_007018,NM_001735	chr9,chr9	+,-	CEP110,C5	94401,56438
chr9:116919685-116920119	chr9	+	116919736	116920166	True	NM_138424,NM_032888	chr9,chr9	-,+	KIF12,COL27A1	-58399,-1556
chr22:35843834-35844104	chr22	+	35843971	35844120	True	NM_005368,NM_006739	chr22,chr22	-,+	MB,MCM5	169314,-47906
chr1:18083473-18084909	chr1	+	18083672	18084941	True	NM_018715,NM_030812	chr1,chr1	-,+	RCC2,ACTL8	-317452,-1915
chr4:158142772-158143204	chr4	+	158142835	158143021	True	NM_001083619,NM_000826,NR_036641,NM_001083620	chr4,chr4,chr4,chr4	+,+,-,+	GRIA2,GRIA2,PDGFC,GRIA2	-1150,-1150,-250289,-1066
chr2:228489809-228491216	chr2	+	228489961	228491063	True	NM_020161,NM_004504,NM_001162483	chr2,chr2,chr2	-,+,-	C2orf83,AGFG1,C2orf83	7023,-153131,7023
chr11:60927229-60927776	chr11	+	60927422	60927752	True	NM_001079807,NM_017966	chr11,chr11	+,-	PGA3,VPS37C	43231,1214
chr18:51886080-51887564	chr18	+	51886256	51887583	True	NM_173529,NM_139171	chr18,chr18	+,-	C18orf54,STARD6	-1137,-5313
chr4:4544752-4545344	chr4	+	4544946	4545037	True	NR_037888,NM_016930	chr4,chr4	+,-	LOC100507266,STX18	-1149,-1171
chr5:139782847-139783155	chr5	+	139782867	139782981	True	NM_024668,NM_017747,NM_020690,NM_017978,NM_001945,NM_001197030	chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,-,+	ANKHD1,ANKHD1,ANKHD1-EIF4EBP3,ANKHD1,HBEGF,ANKHD1	-1531,-1531,-1531,-1531,-56679,-1531
chr20:36662864-36663657	chr20	+	36662871	36663685	True	NM_021215,NM_014657	chr20,chr20	+,-	RPRD1B,TTI1	-974,-1038
chr2:71046957-71047408	chr2	+	71047135	71047445	True	NM_173535,NM_012476	chr2,chr2	-,+	CLEC4F,VAX2	337,80274
chr2:231920263-231920738	chr2	+	231920452	231920736	True	NR_033879,NM_002807,NM_001191037,NR_034059	chr2,chr2,chr2,chr2	-,+,+,+	LOC348761,PSMD1,PSMD1,PSMD1	-59705,841,841,841
chr8:22133141-22134120	chr8	+	22133498	22133768	True	NM_001135721,NM_018068,NR_029714	chr8,chr8,chr8	+,+,-	PIWIL2,PIWIL2,MIR320A	-469,-739,-30942
chr10:111984699-111985425	chr10	+	111984701	111985387	True	NM_005962,NM_005871	chr10,chr10	+,-	MXI1,SMNDC1	374,79371
chr6:16237720-16238182	chr6	+	16237750	16238199	True	NM_000332,NM_006877	chr6,chr6	-,+	ATXN1,GMPR	523572,611
chr19:54569225-54569730	chr19	+	54569238	54569539	True	NM_198481,NM_004542	chr19,chr19	-,+	VSTM1,NDUFA3	-2031,36620
chr22:31004762-31005510	chr22	+	31004810	31005493	True	NR_036550,NM_000355,NM_001184726	chr22,chr22,chr22	-,+,+	PES1,TCN2,TCN2	-1810,-1791,-1791
chr3:197881505-197881872	chr7	-	33706	34084	False	NM_002607,NM_020223	chr7,chr7	-,+	PDGFA,FAM20C	525447,158884
chr3:197881505-197881872	chr3	+	197881515	197881893	True	NR_003291	chr3	-	LOC348840	-73973
chr3:197881505-197881872	chr16	+	90170085	90170463	False	NM_001098173,NR_023348	chr16,chr16	-,+	PRDM7,GAS8	-27747,-81128
chr3:197881505-197881872	chr9	+	141108756	141109134	False	NM_032937	chr9	-	C9orf37	-595448
chrX:102859919-102860778	chrX	+	102860274	102860683	True	NM_001142418,NM_032926,NM_001006933	chrX,chrX,chrX	-,+,+	MORF4L2,TCEAL3,TCEAL3	81120,2150,2150
chr6:121758383-121758706	chr6	+	121758411	121758604	True	NM_000165,NM_152730	chr6,chr6	+,-	GJA1,C6orf170	-1725,-102767
chr19:7951873-7952312	chr19	+	7951901	7952360	True	NM_025061,NR_033250	chr19,chr19	+,-	LRRC8E,LOC388499	1029,-6784
chr10:62760665-62761111	chr10	+	62760716	62761022	True	NM_033379,NR_024554,NR_024555	chr10,chr10,chr10	+,-,-	CDK1,RHOBTB1,RHOBTB1	-222555,-2,226
chr20:58299131-58299340	chr20	+	58299172	58299348	True	NM_014258,NM_183246,NM_183244	chr20,chr20,chr20	-,+,+	SYCP2,PHACTR3,PHACTR3	207911,-2958,-2958
chr16:31484221-31485192	chr16	+	31484257	31484739	True	NM_015927,NM_003041,NM_001164719,NM_001042454,NM_001136509	chr16,chr16,chr16,chr16,chr16	+,+,+,+,-	TGFB1I1,SLC5A2,TGFB1I1,TGFB1I1,ZNF843	2,9699,-779,-832,-29909
chr11:131243857-131244249	chr11	+	131243882	131244296	True	NM_001048209,NM_014758	chr11,chr11	+,-	NTM,SNX19	-3562,-457500
chr6:160220175-160220959	chr6	+	160220502	160220992	True	NM_173516,NM_014161,NM_030752,NM_001008897	chr6,chr6,chr6,chr6	+,+,-,-	PNLDC1,MRPL18,TCP1,TCP1	308,-9066,-9767,-9767
chr1:151800475-151801575	chr1	+	151800633	151801149	True	NR_024237,NM_001001523,NM_005060	chr1,chr1,chr1	+,-,-	LOC100132111,RORC,RORC	9795,-2080,3249
chrX:148569769-148570010	chrX	+	148569889	148570019	True	NM_001171907,NM_000202	chrX,chrX	+,-	CXorf40A,IDS	52499,16915
chrX:148569769-148570010	chrX	-	148608196	148608633	False	NM_001171907,NR_027455	chrX,chrX	+,-	CXorf40A,LOC100131434	13885,12730
chr21:46792723-46794127	chr21	+	46792774	46793770	True	NM_130445,NR_028082	chr21,chr21	+,-	COL18A1,NCRNA00175	31326,51235
chr12:119423400-119424233	chr12	+	119423405	119424273	True	NR_024246,NM_194286	chr12,chr12	-,+	LOC144742,SRRM4	316962,-4163
chr18:2844424-2845707	chr18	+	2844831	2845540	True	NR_026659,NM_032048	chr18,chr18	-,+	LOC727896,EMILIN2	101137,1487
chr2:239149426-239149651	chr2	+	239149513	239149657	True	NR_026925,NM_001142853,NR_026926,NM_018645,NR_026923	chr2,chr2,chr2,chr2,chr2	-,-,-,-,+	LOC151174,HES6,LOC151174,HES6,LOC643387	-9195,-832,-9195,-832,-9237
chr16:88773337-88773599	chr16	+	88773376	88773618	True	NM_001171816,NM_001171815,NM_001012759,NM_178841,NM_001012762	chr16,chr16,chr16,chr16,chr16	-,-,+,-,+	RNF166,RNF166,CTU2,RNF166,CTU2	-3351,-576,-536,-547,-536
chr12:54783138-54784076	chr12	+	54783207	54783821	True	NM_001130968,NM_015481,NR_029894,NM_001130967	chr12,chr12,chr12,chr12	-,-,+,-	ZNF385A,ZNF385A,MIR148B,ZNF385A	1312,-4726,-52258,1312
chr21:40033008-40033313	chr21	+	40033151	40033289	True	NM_005239,NM_004449,NM_001136154	chr21,chr21,chr21	+,-,-	ETS2,ERG,ERG	144559,465,465
chr19:46143286-46143636	chr19	+	46143291	46143483	True	NR_029886,NM_012155,NM_001193268,NM_001193269,NM_000164,NR_034098	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,+,-	MIR330,EML2,EML2,EML2,GIPR,EML2	-946,-616,5342,3552,28018,-616
chrX:83003366-83003901	chrX	+	83003482	83003855	True	NM_021118,NM_014496	chrX,chrX	+,-	CYLC1,RPS6KA6	112314,439149
chr4:2044578-2044927	chr4	+	2044782	2044956	True	NM_001168243,NM_001141936,NM_005663	chr4,chr4,chr4	+,+,-	C4orf48,C4orf48,WHSC2	-1113,-1056,-33823
chr4:15964174-15964421	chr4	+	15964188	15964322	True	NM_031950,NM_001775	chr4,chr4	-,+	FGFBP2,CD38	587,-184308
chr14:61804710-61806132	chr14	+	61804724	61805748	True	NM_001017970,NM_006255	chr14,chr14	-,+	TMEM30B,PRKCH	-56194,-16260
chr2:219744670-219745249	chr2	+	219744724	219745060	True	NM_017431,NM_025216	chr2,chr2	-,+	PRKAG3,WNT10A	-48212,194
chr17:72929969-72930924	chr17	+	72930082	72930807	True	NM_173477,NM_178233,NM_178160	chr17,chr17,chr17	-,+,+	USH1G,OTOP3,OTOP2	-10731,1089,-9765
chr5:148785185-148785674	chr5	+	148785256	148785600	True	NR_027180,NM_014443	chr5,chr5	+,-	LOC728264,IL17B	839,-26418
chr17:79282185-79282602	chr17	+	79282197	79282306	True	NM_178519,NR_038080,NM_001086521	chr17,chr17,chr17	-,-,+	C17orf55,C17orf55,C17orf89	793,793,-69137
chr6:42789203-42791067	chr6	+	42789468	42790835	True	NM_015349,NM_001008739	chr6,chr6	+,-	KIAA0240,C6orf226	-725,67776
chr9:115770275-115771001	chr9	+	115770297	115771045	True	NM_001101338,NR_024366	chr9,chr9	-,+	ZNF883,NCRNA00256A	3477,104130
chr17:36511925-36512273	chr17	+	36512060	36512226	True	NM_001004334,NM_014598	chr17,chr17	-,+	GPR179,SOCS7	-12367,-4107
chr19:50531477-50532490	chr19	+	50531891	50532395	True	NM_001025778,NM_001006656,NM_016440,NM_015428	chr19,chr19,chr19,chr19	-,+,-,+	VRK3,ZNF473,VRK3,ZNF473	-3086,-2730,-3086,-2730
chr1:152854740-152855411	chr1	+	152854829	152855225	True	NM_178351,NM_030663	chr1,chr1	-,+	LCE1C,SMCP	-75722,-4082
chr19:54058230-54059351	chr19	+	54058316	54059095	True	NM_001079907,NR_002938	chr19,chr19	+,-	ZNF331,LOC284379	194,47707
chr19:49540293-49540842	chr19	+	49540293	49540784	True	NR_004383,NM_033378,NM_033377,NR_024244,NM_033043	chr19,chr19,chr19,chr19,chr19	+,+,-,-,+	SNAR-G1,CGB2,CGB1,SNAR-G2,CGB5	-67,-5214,-102,-5249,6317
chr19:49540293-49540842	chr19	-	49534548	49534758	False	NR_024244,NM_033378,NM_033377,NR_004383,NM_000737	chr19,chr19,chr19,chr19,chr19	-,+,-,+,-	SNAR-G2,CGB2,CGB1,SNAR-G1,CGB	336,371,5483,5518,-6955
chr16:88731277-88732469	chr16	+	88731443	88731961	True	NM_002461,NR_024399,NR_024402	chr16,chr16,chr16	-,+,+	MVD,MGC23284,MGC23284	-1948,-1713,-1713
chr7:102921508-102922471	chr7	+	102921593	102922268	True	NR_027768,NR_003561,NM_004279	chr7,chr7,chr7	-,-,+	DPY19L2P2,DPY19L2P2,PMPCB	-680,-834,15604
chr5:73938139-73939654	chr5	+	73938258	73939507	True	NM_003633,NM_000521	chr5,chr5	-,+	ENC1,HEXB	-1009,41461
chr5:2749872-2750092	chr5	+	2750038	2750122	True	NM_178569,NM_001134222,NM_033267	chr5,chr5,chr5	+,-,-	C5orf38,IRX2,IRX2	2139,1703,1703
chr8:86377081-86377421	chr8	+	86377115	86377440	True	NM_001738,NM_000067	chr8,chr8	-,+	CA1,CA2	-86773,-1035
chr5:132060321-132062162	chr5	+	132060565	132062169	True	NM_007054,NM_001039780	chr5,chr5	-,+	KIF3A,CCNI2	11146,20967
chr8:116680341-116680687	chr8	+	116680373	116680678	True	NM_014112,NM_032334	chr8,chr8	-,+	TRPS1,UTP23	600,1098063
chr4:104089195-104089779	chr4	+	104089373	104089779	True	NM_001813,NM_001008388	chr4,chr4	-,+	CENPE,CISD2	29837,-299289
chr11:118795108-118795672	chr11	+	118795127	118795469	True	NM_032966,NM_182557	chr11,chr11	+,-	CXCR5,BCL9L	-31077,-13514
chr10:126146923-126147167	chr10	+	126147021	126147183	True	NM_001146340,NM_022126,NM_001167880	chr10,chr10,chr10	-,+,+	NKX1-2,LHPP,LHPP	-8471,3157,3157
chr13:51417927-51418713	chr13	+	51417955	51418732	True	NM_198989,NM_024570	chr13,chr13	-,+	DLEU7,RNASEH2B	-70,65081
chr15:88114011-88115925	chr15	+	88114374	88115974	True	NM_001012338,NR_026869	chr15,chr15	-,+	NTRK3,NCRNA00052	683737,4185
chr8:145024369-145024749	chr8	+	145024436	145024760	True	NM_000837,NR_030383,NM_201379,NM_201381,NM_201380,NM_201383,NM_201382	chr8,chr8,chr8,chr8,chr8,chr8,chr8	+,-,-,-,-,-,-	GRINA,MIR661,PLEC,PLEC,PLEC,PLEC,PLEC	39465,-4989,3378,-5531,334,-7744,-6326
chr2:128418371-128418727	chr2	+	128418375	128418687	True	NM_005291,NM_017980	chr2,chr2	+,-	GPR17,LIMS2	-14987,3530
chr6:83796341-83797631	chr6	+	83796460	83797513	True	NM_198920,NM_015018	chr6,chr6	-,+	UBE2CBP,DOPEY1	-20915,-19126
chr16:68117795-68118179	chr16	+	68117794	68118102	True	NM_004555,NM_173165,NM_173163,NM_018380	chr16,chr16,chr16,chr16	+,+,+,-	NFATC3,NFATC3,NFATC3,DDX28	1166,1166,1166,-60024
chr2:227699920-227700214	chr2	+	227699968	227700240	True	NM_001167608,NM_032276,NM_005544	chr2,chr2,chr2	+,+,-	RHBDD1,RHBDD1,IRS1	430,430,-36462
chr2:46775792-46776377	chr2	+	46775861	46776369	True	NM_080653,NM_012249	chr2,chr2	-,+	ATP6V1E2,RHOQ	-28765,-6045
chr2:54311904-54312141	chr2	+	54311910	54312132	True	NM_014614,NM_138448	chr2,chr2	-,+	PSME4,ACYP2	-113933,30277
chr2:97357880-97358767	chr2	+	97357882	97358596	True	NM_001142292,NM_001113382	chr2,chr2	-,+	LMAN2L,FER1L5	47267,-49359
chr19:6425193-6425614	chr19	+	6425193	6425577	True	NR_037505,NM_139161,NM_003685,NM_173637	chr19,chr19,chr19,chr19	-,+,-,-	MIR3940,CRB3,KHSRP,SLC25A41	-8671,38682,-371,8263
chr7:33964046-33964320	chr7	+	33964094	33964267	True	NM_133468,NM_203288	chr7,chr7	+,-	BMPER,RP9	-19033,-815092
chr2:204002674-204004582	chr2	+	204002738	204004120	True	NM_177538,NM_018256	chr2,chr2	+,-	CYP20A1,WDR12	99043,-225789
chr19:42570389-42571337	chr19	+	42570487	42571234	True	NM_022752,NM_002088	chr19,chr19	+,-	ZNF574,GRIK5	9055,-530
chr11:64009445-64009697	chr11	+	64009488	64009558	True	NM_057092,NM_138689,NM_003377,NM_004470,NM_000932,NM_001135208,NM_001184883	chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,-,+,+,+,+,+	FKBP2,PPP1R14B,VEGFB,FKBP2,PLCB3,FKBP2,PLCB3	29,4905,-7273,-1126,9436,-935,9436
chr3:99985324-99986476	chr3	+	99985544	99986361	True	NM_018309,NM_014820,NM_001199198	chr3,chr3,chr3	+,-,+	TBC1D23,TOMM70A,TBC1D23	-5909,133925,-5909
chr6:53663470-53664332	chr6	+	53663476	53664311	True	NM_018214,NM_001003760	chr6,chr6	+,-	LRRC1,KLHL31	-3750,-132970
chr8:123793446-123793778	chr8	+	123793485	123793693	True	NM_014943,NM_001134671	chr8,chr8	+,-	ZHX2,DERL1	207,261005
chr19:55894599-55895121	chr19	+	55894893	55894961	True	NM_139172,NM_001190764,NM_000991,NM_001136135,NM_001136134,NM_001136137,NM_001136136	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+,+	TMEM190,LOC388564,RPL28,RPL28,RPL28,RPL28,RPL28	-6740,716,2338,2338,2338,2338,2338
chr1:26559938-26560301	chr1	+	26559955	26560325	True	NM_022778,NM_001077262	chr1,chr1	+,-	CCDC21,UBXN11	367,72920
chrX:112084280-112084666	chrX	+	112084396	112084581	True	NM_133265,NM_001004308	chrX,chrX	-,+	AMOT,ZCCHC16	-353,-758194
chr10:64134435-64134704	chr10	+	64134464	64134732	True	NM_145307,NM_199451,NM_014951,NM_199450	chr10,chr10,chr10,chr10	-,+,+,+	RTKN2,ZNF365,ZNF365,ZNF365	-105998,-599,-599,-599
chr12:112039478-112040499	chr12	+	112039717	112040408	True	NM_001136538,NM_002973	chr12,chr12	+,-	ACAD10,ATXN2	83448,-2237
chr3:185828843-185829621	chr3	+	185828858	185829654	True	NR_033752,NM_004454	chr3,chr3	+,-	LOC344887,ETV5	-142642,-1957
chrX:133783455-133783935	chrX	+	133783582	133783825	True	NM_021796,NM_001170780	chrX,chrX	-,+	PLAC1,FAM122C	8745,146617
chr14:23301708-23301942	chr14	+	23301854	23301945	True	NM_004995,NM_181304,NM_181305,NM_181306,NM_181307,NM_180982,NM_001126106,NM_178336	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,+,+,+,-,+	MMP14,MRPL52,MRPL52,MRPL52,MRPL52,MRPL52,SLC7A7,MRPL52	3847,-2820,-2820,-2820,-2820,-2820,-12840,-2820
chr18:46985155-46985685	chr18	+	46985456	46985721	True	NM_017653,NR_031720	chr18,chr18	-,+	DYM,MIR1539	1419,28021
chr12:53297554-53297765	chr12	+	53297562	53297730	True	NM_199187,NM_002273	chr12,chr12	+,-	KRT18,KRT8	44924,1188
chr6:105405593-105406003	chr6	+	105405621	105405778	True	NM_001004317,NM_020771	chr6,chr6	+,-	LIN28B,HACE1	-763,-97827
chr8:143545004-143545461	chr8	+	143545135	143545415	True	NM_145003,NM_001702	chr8,chr8	-,+	TSNARE1,BAI1	-60592,25
chr3:111757622-111757888	chr3	+	111757621	111757927	True	NM_001042575,NR_026734,NM_001190259	chr3,chr3,chr3	+,+,-	TMPRSS7,TMPRSS7,GCET2	537,537,94275
chrX:134156678-134158637	chrX	+	134156853	134157683	True	NM_001078171,NM_001078173	chrX,chrX	+,-	FAM127A,FAM127C	8649,-287
chr1:161068343-161068543	chr1	+	161068380	161068518	True	NM_030916,NR_033386,NM_001007255,NM_152366,NR_033385	chr1,chr1,chr1,chr1,chr1	-,+,+,+,+	PVRL4,KLHDC9,KLHDC9,KLHDC9,KLHDC9	-8995,-280,-250,-250,-280
chr11:72927020-72927492	chr11	+	72927019	72927335	True	NM_014824,NM_002564,NM_176071,NM_176072	chr11,chr11,chr11,chr11	-,+,+,+	FCHSD2,P2RY2,P2RY2,P2RY2	-73876,2008,2166,2008
chr16:68283153-68284264	chr16	+	68283241	68284066	True	NM_024939,NM_012320	chr16,chr16	-,+	ESRP2,PLA2G15	-13105,-4045
chr4:88142469-88143894	chr4	+	88142603	88143596	True	NM_020803,NM_024047	chr4,chr4	-,+	KLHL8,NUDT9	-929,200138
chr22:38002811-38003132	chr22	+	38002991	38003173	True	NM_001172688,NM_013365,NM_001172687,NM_006498,NM_001001561,NM_001001560	chr22,chr22,chr22,chr22,chr22,chr22	+,+,+,-,+,+	GGA1,GGA1,GGA1,LGALS2,GGA1,GGA1	1873,1307,1307,-26967,1307,1307
chr5:133339397-133339721	chr5	+	133339445	133339769	True	NR_036625,NR_036624,NM_003374,NM_003202	chr5,chr5,chr5,chr5	-,-,-,+	VDAC1,VDAC1,VDAC1,TCF7	938,938,1105,110632
chr15:89631876-89632125	chr15	+	89632000	89632174	True	NM_007011,NM_152924,NM_000326	chr15,chr15,chr15	+,+,-	ABHD2,ABHD2,RLBP1	-670,-670,132798
chr11:18193420-18194512	chr11	+	18193454	18194514	True	NR_026576,NM_054032	chr11,chr11	-,+	SAA3P,MRGPRX4	-55775,-21
chr20:61570215-61571003	chr20	+	61570549	61571043	True	NM_033081,NM_017896,NM_022105,NM_080797	chr20,chr20,chr20,chr20	-,+,-,-	DIDO1,C20orf11,DIDO1,DIDO1	-1245,-1159,-1245,-1245
chr15:25318896-25319741	chr15	+	25318974	25319721	True	NR_003322,NR_003323,NR_003320,NR_003321,NR_003326,NR_003327,NR_003324,NR_003325,NR_003328,NR_003329,NR_003318,NM_130838,NR_003332,NR_003330,NR_001290,NR_003331,NR_003317	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,+,+,-,+,+,+,+,+	SNORD116-7,SNORD116-8,SNORD116-5,SNORD116-6,SNORD116-11,SNORD116-12,SNORD116-9,SNORD116-10,SNORD116-13,SNORD116-14,SNORD116-3,UBE3A,SNORD116-17,SNORD116-15,SNORD116-19,SNORD116-16,SNORD116-2	-6091,-3447,-6091,-8853,1353,2475,-772,-28,4482,5566,-772,330982,9012,6711,9012,8192,-8853
chr17:41058932-41060021	chr17	+	41058935	41059986	True	NR_027254,NM_000151	chr17,chr17	-,+	LOC388387,G6PC	-8184,-6171
chr4:103788877-103789385	chr4	+	103788970	103789229	True	NM_001008388,NM_181890,NM_181893	chr4,chr4,chr4	+,-,-	CISD2,UBE2D3,UBE2D3	905,861,832
chr11:119039247-119039486	chr11	+	119039250	119039322	True	NM_001145018,NM_170722,NM_024618	chr11,chr11,chr11	-,+,+	CCDC153,NLRX1,NLRX1	27312,117,117
chr9:37037114-37037619	chr9	+	37037167	37037287	True	NM_016734,NR_036592	chr9,chr9	-,+	PAX5,LOC100506710	-2691,42605
chr1:180459775-180461156	chr1	+	180460140	180460928	True	NM_001135669,NM_032360	chr1,chr1	+,-	XPR1,ACBD6	140217,11158
chr4:106067045-106067332	chr4	+	106067053	106067269	True	NM_001127208,NM_006903,NM_017628	chr4,chr4,chr4	+,-,+	TET2,PPA2,TET2	572,328008,-73
chr9:136445505-136446319	chr9	+	136445580	136446238	True	NM_014694,NM_001080515	chr9,chr9	+,-	ADAMTSL2,FAM163B	-45656,-212
chr20:50157336-50158055	chr20	+	50157438	50158050	True	NM_173091,NM_014484,NM_012340	chr20,chr20,chr20	-,+,-	NFATC2,MOCS3,NFATC2	1258,-582135,1258
chr2:128051231-128051537	chr2	+	128051242	128051410	True	NM_000122,NM_000312	chr2,chr2	-,+	ERCC3,PROC	392,124585
chr2:171672739-171672957	chr2	+	171672843	171672945	True	NM_013445,NM_000817,NR_027433	chr2,chr2,chr2	+,+,-	GAD1,GAD1,LOC440925	254,254,-101766
chr1:150692969-150693300	chr1	+	150692989	150693175	True	NM_001199829,NM_032132,NR_036211	chr1,chr1,chr1	-,-,+	HORMAD1,HORMAD1,MIR4257	243,243,-168643
chr7:73083972-73084193	chr7	+	73083976	73084074	True	NM_001077621,NM_032317	chr7,chr7	+,-	VPS37D,DNAJC30	-1853,13757
chr10:118357261-118357620	chr10	+	118357286	118357600	True	NM_006229,NM_144661	chr10,chr10	+,-	PNLIPRP1,C10orf82	-6849,71931
chr5:173135744-173135947	chr5	+	173135901	173135987	True	NR_027109,NM_138369	chr5,chr5	+,-	LOC285593,BOD1	-129295,-92235
chr3:120401163-120402721	chr3	+	120401206	120402718	True	NM_000187,NM_005513	chr3,chr3	-,+	HGD,GTF2E1	-122,58839
chr1:182558546-182558873	chr1	+	182558600	182558908	True	NR_036490,NM_021133	chr1,chr1	+,-	LOC284648,RNASEL	25366,-206
chr8:23562524-23562806	chr8	+	23562617	23562839	True	NM_016612,NM_001136271	chr8,chr8	+,-	SLC25A37,NKX2-6	-176305,1133
chr13:21668865-21669366	chr13	+	21668930	21669068	True	NM_014572,NM_005870	chr13,chr13	-,+	LATS2,SAP18	-33208,45584
chr7:50342869-50343235	chr7	+	50342910	50343168	True	NM_001042762,NM_006060	chr7,chr7	-,+	FIGNL1,IKZF1	174970,1209
chr3:54157022-54157598	chr3	+	54157099	54157625	True	NM_018398,NM_021237	chr3,chr3	+,-	CACNA2D3,SELK	-457,-231110
chr1:205900685-205901500	chr1	+	205900990	205901500	True	NM_052934,NM_001123168	chr1,chr1	-,+	SLC26A9,FAM72A	11138,237410
chr8:86272727-86272979	chr8	+	86272950	86273030	True	NM_005181,NM_001128829	chr8,chr8	+,-	CA3,CA1	78025,17368
chr1:26797962-26798437	chr1	+	26797978	26798458	True	NM_005517,NM_173574	chr1,chr1	+,-	HMGN2,ZNF683	443,-98712
chr5:148038139-148039934	chr5	+	148038302	148039960	True	NM_000024,NM_000870	chr5,chr5	+,-	ADRB2,HTR4	166195,-4563
chr4:77997278-77997490	chr4	+	77997350	77997454	True	NM_004354,NM_006835	chr4,chr4	+,-	CCNG2,CCNI	80902,-225
chr18:13139241-13139940	chr18	+	13139499	13139901	True	NM_002828,NM_181481	chr18,chr18	-,+	PTPN2,C18orf1	-255165,78884
chr1:248057610-248058640	chr1	+	248057668	248058638	True	NM_001001959,NM_001001957	chr1,chr1	-,+	OR11L1,OR2W3	-52470,250
chr2:197509702-197511091	chr2	+	197510098	197511107	True	NM_020760,NM_001080539	chr2,chr2	-,+	HECW2,CCDC150	-52763,-5794
chr1:161575293-161575622	chr1	+	161575320	161575552	True	NM_000570,NR_024151	chr1,chr1	-,+	FCGR3B,HSPA7	25656,296
chr1:161575293-161575622	chr1	+	161493853	161493903	False	NM_000569,NM_002155	chr1,chr1	-,+	FCGR3A,HSPA6	25965,132
chr7:50774200-50775104	chr7	+	50774212	50775088	True	NR_033845,NM_001001550	chr7,chr7	+,-	LOC100129427,GRB10	-174806,-1214
chr5:147162128-147162391	chr5	+	147162138	147162440	True	NM_014790,NM_054023	chr5,chr5	-,+	JAKMIP2,SCGB3A2	-32,95833
chr5:66139406-66140445	chr5	+	66139627	66140467	True	NM_005582,NM_015183	chr5,chr5	-,+	CD180,MAST4	352200,-15075
chr17:7820223-7820811	chr17	+	7820294	7820648	True	NR_003000,NR_024349	chr17,chr17	+,-	SCARNA21,LOC284023	-10904,-1029
chr4:159705053-159705935	chr4	+	159705057	159705869	True	NM_005038,NM_020840	chr4,chr4	-,+	PPID,FNIP2	-60505,-14926
chr17:73853894-73854575	chr17	+	73854282	73854460	True	NM_012478,NM_001080419	chr17,chr17	-,+	WBP2,UNK	-2781,-73652
chr1:214159502-214159738	chr1	+	214159505	214159783	True	NR_037850,NM_002763	chr1,chr1	-,+	LOC100505832,PROX1	-19897,2076
chr4:77184891-77186041	chr4	+	77184983	77186087	True	NM_005506,NM_001136570	chr4,chr4	-,+	SCARB2,FAM47E	-49931,-12181
chr3:10324328-10325247	chr3	+	10324343	10325225	True	NM_001134941,NM_001134946,NM_001134944,NM_001134945,NR_026829,NR_024133,NR_024138,NR_004431,NM_016362,NR_024145,NR_024144,NR_024132,NR_024146,NR_024134,NR_024135,NR_024136,NR_024137	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,+,-,-,+,-,+,+,-,+,-,-,-,-	GHRL,GHRL,GHRL,GHRL,C3orf42,GHRL,GHRL,GHRLOS,GHRL,GHRLOS,GHRLOS,GHRL,GHRLOS,GHRL,GHRL,GHRL,GHRL	7244,9456,9456,9456,877,9456,9456,2212,7244,2212,2212,9456,2212,9456,9456,9456,9456
chr11:13030253-13030838	chr11	+	13030331	13030671	True	NM_001080521,NM_032320	chr11,chr11	+,-	RASSF10,BTBD10	298,454217
chr11:126870225-126870427	chr11	+	126870229	126870427	True	NM_001161707,NM_006278,NM_032531	chr11,chr11,chr11	-,+,-	KIRREL3,ST3GAL4,KIRREL3	389,-644184,389
chr1:236450290-236451386	chr1	+	236450306	236451204	True	NM_145861,NM_019891	chr1,chr1	+,-	EDARADD,ERO1LB	106475,-4967
chr2:128611574-128612889	chr2	+	128611573	128612658	True	NM_032740,NM_004805	chr2,chr2	+,-	SFT2D3,POLR2D	-153041,3129
chr20:32152159-32152476	chr20	+	32152396	32152456	True	NM_005093,NM_001039709,NM_031231	chr20,chr20,chr20	+,+,-	CBFA2T2,CBFA2T2,NECAB3	-2276,-2276,109858
chr7:28725622-28726078	chr7	+	28725645	28726042	True	NM_014817,NM_001011666	chr7,chr7	-,+	TRIL,CREB5	272038,3
chr12:12851703-12852130	chr12	+	12851836	12851977	True	NM_004064,NM_006143	chr12,chr12	+,-	CDKN1B,GPR19	18324,-2715
chr12:9315971-9316215	chr12	+	9316094	9316258	True	NM_002864,NR_036466	chr12,chr12	-,+	PZP,LOC100499405	44758,76340
chr3:66281083-66281490	chr3	+	66281250	66281330	True	NR_028475,NM_004742	chr3,chr3	+,-	SLC25A26,MAGI1	-10139,-256741
chrX:25212967-25213258	chrX	+	25213015	25213225	True	NM_139058,NR_003007	chrX,chrX	-,+	ARX,SCARNA23	-178950,-450508
chr1:168196351-168196918	chr1	+	168196367	168196967	True	NR_026844,NM_199344	chr1,chr1	-,+	ANKRD36BP1,SFT2D2	19751,-1163
chr9:69201990-69203195	chr9	+	69202095	69202437	True	NM_001085476,NM_001098805	chr9,chr9	-,+	FOXD4L6,ANKRD20A4	109,179543
chr9:69201990-69203195	chr9	-	70917042	70917384	False	NR_015423,NM_199135	chr9,chr9	-,+	LOC572558,FOXD4L3	55423,398
chr10:131264143-131264412	chr10	+	131264159	131264345	True	NM_002412,NR_036179	chr10,chr10	+,-	MGMT,MIR4297	1108,377343
chr9:132596925-132597200	chr9	+	132596995	132597249	True	NM_006676,NM_001110303,NM_001008563,NM_016520	chr9,chr9,chr9,chr9	+,+,+,-	USP20,USP20,USP20,C9orf78	446,446,507,373
chr20:45280429-45281123	chr20	+	45280434	45281024	True	NM_022829,NM_030777,NM_001193342,NM_001193339	chr20,chr20,chr20,chr20	-,+,-,-	SLC13A3,SLC2A10,SLC13A3,SLC13A3	-334,57254,-334,-334
chr22:39011322-39011981	chr22	+	39011322	39011938	True	NM_001002880,NM_001013647	chr22,chr22	+,-	CBY1,LOC646851	40719,40746
chr11:74014788-74015924	chr11	+	74015141	74015763	True	NM_182904,NM_016147	chr11,chr11	-,+	P4HA3,PPME1	6986,-132833
chr1:2127394-2128133	chr1	+	2127524	2127690	True	NM_003036,NM_182533,NR_024445	chr1,chr1,chr1	+,-,-	SKI,C1orf86,LOC100128003	32443,-1310,-2500
chr17:18550824-18551658	chr17	+	18550847	18551112	True	NM_001037330,NM_001039397	chr17,chr17	+,-	TRIM16L,TBC1D28	74289,-3107
chr17:18550824-18551658	chr17	-	15632195	15632286	False	NM_006470,NM_178571	chr17,chr17	-,+	TRIM16,TBC1D26	-46002,3304
chr9:94184471-94184712	chr9	+	94184507	94184727	True	NR_037472,NM_005384	chr9,chr9	+,-	MIR3910-1,NFIL3	213805,1467
chr19:49402316-49402682	chr19	+	49402417	49402479	True	NM_003323,NM_006184	chr19,chr19	-,+	TULP2,NUCB1	-421,827
chr10:17793509-17794023	chr10	+	17793579	17794066	True	NM_014241,NM_001098844	chr10,chr10	-,+	PTPLA,FAM23A	-134206,184
chr10:17793509-17794023	chr10	+	18040546	18041033	False	NM_014241,NM_001098844	chr10,chr10	-,+	PTPLA,FAM23A	-381173,184
chr5:157887637-157889566	chr5	+	157887677	157889344	True	NM_014666,NM_173491	chr5,chr5	-,+	CLINT1,LSM11	-601494,-716973
chr12:79465672-79466598	chr12	+	79465701	79466635	True	NM_001135806,NM_002583	chr12,chr12	+,-	SYT1,PAWR	-26329,618205
chr17:2318633-2318868	chr17	+	2318638	2318724	True	NM_001098509,NR_028335	chr17,chr17	+,-	SGSM2,LOC284009	-77881,56
chr5:71615966-71616191	chr5	+	71615993	71616187	True	NM_015084,NM_024754	chr5,chr5	-,+	MRPS27,PTCD2	39,12
chr19:53719127-53720409	chr19	+	53719383	53720242	True	NM_024733,NM_173856	chr19,chr19	-,+	ZNF665,VN1R2	-22764,41302
chr12:53574522-53574755	chr12	+	53574634	53574694	True	NM_001004304,NM_015989	chr12,chr12	+,-	ZNF740,CSAD	-150,-204
chr11:66044098-66045460	chr11	+	66044260	66045420	True	NM_030981,NM_020470,NM_182553	chr11,chr11,chr11	+,-,+	RAB1B,YIF1A,CNIH2	-8255,11268,275
chr6:144608241-144608872	chr6	+	144608316	144608912	True	NM_007124,NM_031287	chr6,chr6	+,-	UTRN,SF3B5	3960,-191562
chr7:150884742-150884977	chr7	+	150884807	150884975	True	NM_001142460,NM_080871,NM_001142459,NM_019015	chr7,chr7,chr7,chr7	-,-,-,+	ASB10,ASB10,ASB10,CHPF2	-329,-2,-329,44609
chr8:29999317-30000002	chr8	+	29999377	29999856	True	NM_001100916,NM_006571	chr8,chr8	-,+	MBOAT4,DCTN6	2394,13956
chr6:168713007-168713817	chr6	+	168713155	168713741	True	NM_214462,NM_001166412	chr6,chr6	-,+	DACT2,SMOC2	6719,128089
chr17:79269377-79269717	chr17	+	79269385	79269679	True	NM_001037984,NM_138570,NM_001086521	chr17,chr17,chr17	-,-,+	SLC38A10,SLC38A10,C17orf89	-289,-289,-56325
chr1:151688822-151689171	chr1	+	151688828	151689100	True	NM_001144956,NM_007185,NM_001172649,NM_001172648	chr1,chr1,chr1,chr1	+,-,-,-	RIIAD1,CELF3,CELF3,CELF3	4912,240,54,-36
chr12:53731237-53731888	chr12	+	53731384	53731888	True	NM_021640,NM_001173467,NM_152860	chr12,chr12,chr12	+,-,-	C12orf10,SP7,SP7	-37965,-1380,-1847
chr19:8276630-8277235	chr19	+	8276904	8277228	True	NM_024552,NM_032447	chr19,chr19	+,-	LASS4,FBN3	-2738,-64519
chr20:30227652-30228148	chr20	+	30227652	30228102	True	NM_032609,NM_001191	chr20,chr20	+,-	COX4I2,BCL2L1	-2012,82604
chrX:109549808-109550396	chrX	+	109549985	109550145	True	NM_020769,NM_001025580	chrX,chrX	+,-	RGAG1,AMMECR1	112139,11291
chr4:103266764-103267069	chr4	+	103266889	103267115	True	NM_001165412,NM_022154,NM_001135147,NM_001135146	chr4,chr4,chr4,chr4	+,-,-,-	NFKB1,SLC39A8,SLC39A8,SLC39A8	155370,-541,-479,-234
chr10:64336836-64337404	chr10	+	64336929	64337381	True	NM_000399,NM_199452	chr10,chr10	-,+	EGR2,ZNF365	238795,-56773
chr5:147274480-147275257	chr5	+	147274661	147275295	True	NM_054023,NM_206966	chr5,chr5	+,-	SCGB3A2,C5orf46	-16451,10856
chr12:68548768-68549773	chr12	+	68548826	68549796	True	NM_001010942,NM_000619	chr12,chr12	+,-	RAP1B,IFNG	454855,3776
chr2:211494129-211494494	chr2	+	211494328	211494504	True	NM_001136575,NR_002763	chr2,chr2	-,+	LANCL1,CPS1-IT1	-152829,-12091
chr19:49520102-49520448	chr19	+	49520308	49520446	True	NM_000894,NM_000737,NM_033378	chr19,chr19,chr19	-,-,+	LHB,CGB,CGB2	17,7197,14683
chr17:21523169-21524006	chr17	+	21523168	21523984	True	NM_001113434,NM_001194958	chr17,chr17	-,+	C17orf51,KCNJ18	-68227,-214778
chrY:25312526-25313647	chrY	+	25312853	25313392	True	NM_020364,NM_004081	chrY,chrY	+,-	DAZ3,DAZ1	52188,31898
chrY:25312526-25313647	chrY	-	25375755	25376294	False	NM_020420,NM_020363	chrY,chrY	-,+	DAZ4,DAZ2	-30501,-10203
chrY:25312526-25313647	chrY	+	26948924	26949463	False	NM_020364,NM_001005375	chrY,chrY	-,+	DAZ3,DAZ4	10227,30503
chrY:25312526-25313647	chrY	-	27000990	27001529	False	NM_020420,NM_001005786	chrY,chrY	-,+	DAZ4,DAZ2	-41351,-21052
chr19:48957670-48959094	chr19	+	48958042	48958784	True	NM_013348,NM_001080434,NM_031485,NM_170720	chr19,chr19,chr19,chr19	+,-,+,+	KCNJ14,LMTK3,GRWD1,KCNJ14	-19,57712,-9063,5721
chr1:1567866-1568202	chr1	+	1567961	1568169	True	NM_001110781,NM_006983,NR_002946	chr1,chr1,chr1	-,+,+	SLC35E2B,MMP23B,MMP23A	56124,-452,-11
chr1:1567866-1568202	chr1	+	1631180	1631388	False	NM_001110781,NR_002946	chr1,chr1	-,+	SLC35E2B,MMP23A	-6937,-11
chr6:117193422-117194055	chr6	+	117193543	117193810	True	NM_148963,NM_173560	chr6,chr6	-,+	GPRC6A,RFX6	-43345,4565
chr5:138876660-138876925	chr5	+	138876834	138876966	True	NM_198282,NM_003339	chr5,chr5	-,+	TMEM173,UBE2D2	-14491,63784
chr11:75232918-75233961	chr11	+	75232930	75233877	True	NM_030792,NM_001235	chr11,chr11	-,+	GDPD5,SERPINH1	2772,39292
chr9:139693934-139694690	chr9	+	139694029	139694519	True	NR_024580,NM_001039374,NM_001173989,NM_001173988,NM_024718,NM_032928	chr9,chr9,chr9,chr9,chr9,chr9	-,+,+,+,+,+	LOC100131193,KIAA1984,C9orf86,C9orf86,C9orf86,TMEM141	8831,-3290,7854,7854,7854,-8303
chr10:26987011-26987279	chr10	+	26987059	26987255	True	NM_014317,NM_001012750	chr10,chr10	+,-	PDSS1,ABI1	-515,162811
chr15:43810780-43812294	chr15	+	43811127	43812317	True	NM_002373,NM_005657	chr15,chr15	+,-	MAP1A,TP53BP1	-1372,-8420
chr22:24112782-24113704	chr22	+	24112899	24113595	True	NM_213720,NM_005940,NM_182520	chr22,chr22,chr22	-,+,+	CHCHD10,MMP11,C22orf15	-2758,1440,-7746
chr2:23614465-23615983	chr2	+	23614644	23616002	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	533982,-6411
chr9:130743460-130743661	chr9	+	130743568	130743692	True	NM_001035254,NM_001006641	chr9,chr9	-,+	FAM102A,SLC25A25	-756,86786
chr4:9533046-9533495	chr4	+	9533136	9533478	True	NR_031688,NM_001040448	chr4,chr4	-,+	MIR548I2,DEFB131	24509,-86927
chr1:115619632-115619860	chr1	+	115619834	115619916	True	NM_000549,NM_005725	chr1,chr1	+,-	TSHB,TSPAN2	-47470,12263
chr16:49313936-49314226	chr16	+	49313996	49314220	True	NM_144602,NM_004352	chr16,chr16	+,-	C16orf78,CBLN1	93587,1572
chr14:57736068-57736617	chr14	+	57736112	57736412	True	NR_026895,NM_018229,NM_006544	chr14,chr14,chr14	+,+,-	MUDENG,MUDENG,EXOC5	-564,-564,-495
chr19:45996496-45996846	chr19	+	45996561	45996710	True	NM_005619,NM_001080401,NM_206900,NM_206901	chr19,chr19,chr19,chr19	-,+,-,-	RTN2,PPM1N,RTN2,RTN2	3652,5020,3654,-87
chr8:29204707-29205482	chr8	+	29204927	29205351	True	NM_057158,NM_001394,NM_024567	chr8,chr8,chr8	-,-,+	DUSP4,DUSP4,HMBOX1	1021,2966,-456757
chr11:3238859-3239270	chr11	+	3238929	3239289	True	NR_027138,NM_001164377	chr11,chr11	+,-	C11orf36,MRGPRG	272,804
chr2:114513069-114513722	chr2	+	114513068	114513552	True	NM_013412,NM_025181	chr2,chr2	+,-	RABL2A,SLC35F5	-128302,898
chr19:47616130-47616330	chr19	+	47616150	47616314	True	NM_015168,NM_001145713	chr19,chr19	-,+	ZC3H4,SAE1	745,17765
chr12:54476984-54478013	chr12	+	54477270	54477846	True	NR_026657,NR_026658	chr12,chr12	+,-	LOC100240734,LOC100240735	18146,-1663
chr15:69110713-69110990	chr15	+	69110962	69111022	True	NR_031680,NM_006305	chr15,chr15	+,-	MIR548H4,ANP32A	5280,2289
chr20:62598978-62599241	chr20	+	62599114	62599252	True	NM_012469,NM_020713	chr20,chr20	+,-	PRPF6,ZNF512B	13178,2016
chr22:24406444-24407495	chr22	+	24406504	24407410	True	NR_003082,NM_012295,NM_001201429,NM_001199281	chr22,chr22,chr22,chr22	-,+,+,+	GSTTP2,CABIN1,CABIN1,CABIN1	-4605,354,354,409
chr11:44330278-44330599	chr11	+	44330369	44330607	True	NM_021926,NM_000401	chr11,chr11	-,+	ALX4,EXT2	1159,-212673
chr12:10591274-10591955	chr12	+	10591396	10592004	True	NM_007334,NM_002260	chr12,chr12	+,-	KLRD1,KLRC2	-131030,-2804
chr12:10591274-10591955	chr12	+	10575999	10576600	False	NM_007334,NM_007333,NM_002261	chr12,chr12,chr12	+,-,-	KLRD1,KLRC3,KLRC3	-115633,-2805,-2805
chr7:11029780-11031095	chr7	+	11029780	11030566	True	NM_002489,NR_033436	chr7,chr7	-,+	NDUFA4,PHF14	-49967,-16342
chr12:5154527-5154820	chr12	+	5154653	5154737	True	NM_006422,NM_002234	chr12,chr12	-,+	AKAP3,KCNA5	-400310,-1619
chr12:117797652-117798121	chr12	+	117797734	117797928	True	NM_000620,NM_001204218,NM_153348	chr12,chr12,chr12	-,-,+	NOS1,NOS1,FBXW8	1729,1729,-449037
chrX:132548140-132548357	chrX	+	132548203	132548275	True	NM_001101357,NM_001448	chrX,chrX	+,-	CCDC160,GPC4	822801,980
chr9:132805877-132806191	chr9	+	132805946	132806134	True	NM_001136557,NM_001136558,NM_020960,NM_015033	chr9,chr9,chr9,chr9	+,+,+,-	GPR107,GPR107,GPR107,FNBP1	9850,9850,9850,-473
chr2:25476384-25476742	chr2	+	25476433	25476661	True	NM_153759,NM_014971	chr2,chr2	-,+	DNMT3A,EFR3B	-1253,-211511
chr6:88405615-88406132	chr6	+	88405978	88406104	True	NM_018064,NM_001197259,NR_002767	chr6,chr6,chr6	-,+,-	AKIRIN2,ORC3,AKIRIN2-AS1	5933,-106251,4881
chr10:13629907-13630136	chr10	+	13629923	13630129	True	NM_003675,NM_001100912	chr10,chr10	+,-	PRPF18,BEND7	-1035,-84947
chr14:37645064-37645387	chr14	+	37645272	37645441	True	NM_001171170,NM_030631,NR_033240	chr14,chr14,chr14	-,-,+	SLC25A21,SLC25A21,LOC100129794	-3407,-3407,-4096
chr5:138609252-138609483	chr5	+	138609264	138609488	True	NR_003141,NR_002915,NR_036536,NR_036535,NM_022464,NM_199189,NM_001194954	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,-,+,+	SNHG4,SNORA74A,SNHG4,MATR3,SIL1,MATR3,MATR3	42,4980,42,42,-75199,42,42
chr3:195269859-195270106	chr3	+	195269956	195270152	True	NR_003265,NM_006241	chr3,chr3	+,-	SDHAP2,PPP1R2	114757,122
chr11:118439189-118439715	chr11	+	118439306	118439387	True	NM_020153,NM_001142281,NM_001168618,NM_001655	chr11,chr11,chr11,chr11	-,+,-,+	IFT46,ARCN1,IFT46,ARCN1	-2515,3714,-2515,3714
chr17:17681173-17681870	chr17	+	17681251	17681749	True	NM_030665,NR_024007	chr17,chr17	+,-	RAI1,SMCR5	-96515,1144
chr17:76834916-76836119	chr17	+	76834983	76835879	True	NM_030968,NM_025090	chr17,chr17	+,-	C1QTNF1,USP36	184371,1140
chr10:74387028-74387549	chr10	+	74387196	74387512	True	NM_138357,NM_006077,NM_001195518	chr10,chr10,chr10	+,-,-	CCDC109A,CBARA1,CBARA1	64376,-1247,-1247
chr10:111969015-111969339	chr10	+	111969020	111969320	True	NM_001008541,NM_005871,NM_130439	chr10,chr10,chr10	+,-,+	MXI1,SMNDC1,MXI1	668,95437,-1708
chr1:226003846-226004801	chr1	+	226004069	226004849	True	NM_000120,NM_001136018,NM_014698	chr1,chr1,chr1	+,+,-	EPHX1,EPHX1,TMEM63A	8152,-6330,65621
chr2:172950080-172950675	chr2	+	172950176	172950582	True	NM_178120,NM_001038493,NM_004405	chr2,chr2,chr2	+,+,-	DLX1,DLX1,DLX2	-21,-21,16946
chr2:23676175-23676428	chr2	+	23676248	23676343	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	473644,-68001
chr1:94673659-94674106	chr1	+	94673800	94673900	True	NM_004815,NM_001122674	chr1,chr1	-,+	ARHGAP29,ABCD3	29467,210032
chr12:10659544-10659926	chr12	+	10659563	10659942	True	NM_213658,NM_007334	chr12,chr12	-,+	KLRC1,KLRD1	-52348,-199197
chr15:66676970-66678484	chr15	+	66677332	66677776	True	NM_002755,NM_017858	chr15,chr15	+,-	MAP2K1,TIPIN	1434,-28278
chr9:74967151-74968311	chr9	+	74967338	74968204	True	NM_138691,NM_001102420	chr9,chr9	+,-	TMC1,ZFAND5	168512,12009
chrX:2880012-2881012	chrX	+	2880322	2881053	True	NM_000047,NM_001011719	chrX,chrX	-,+	ARSE,ARSH	1494,43600
chr2:139257757-139258549	chr2	+	139257947	139258563	True	NM_001001664,NM_007226	chr2,chr2	+,-	SPOPL,NXPH2	786,279298
chr2:228573169-228573917	chr2	+	228573419	228573819	True	NM_001130046,NM_025243	chr2,chr2	+,-	CCL20,SLC19A3	104738,8990
chr19:56185552-56185852	chr19	+	56185635	56185885	True	NM_001130072,NM_203374,NM_001130071,NM_013333	chr19,chr19,chr19,chr19	+,-,+,+	EPN1,ZNF784,EPN1,EPN1	675,-49694,2105,675
chr19:15902078-15903251	chr19	+	15902280	15903271	True	NM_001004466,NR_033864	chr19,chr19	+,-	OR10H5,CYP4F24P	1587,-11482
chr1:226069076-226069640	chr1	+	226069160	226069686	True	NM_020997,NM_000120,NM_014698	chr1,chr1,chr1	-,+,-	LEFTY1,EPHX1,TMEM63A	7210,-56209,784
chr3:152031105-152032255	chr3	+	152031124	152032156	True	NM_207297,NM_001123228	chr3,chr3	+,-	MBNL1,TMEM14E	-13988,26673
chr5:16182184-16182870	chr5	+	16182193	16182794	True	NM_012304,NM_001102562	chr5,chr5	+,-	FBXL7,MARCH11	-681939,-2296
chr14:23452122-23452936	chr14	+	23452121	23452821	True	NM_001099780,NM_198086,NM_032876	chr14,chr14,chr14	+,-,-	PSMB11,JUB,JUB	58554,-5689,-273
chr2:233470786-233470996	chr2	+	233470902	233470982	True	NM_145702,NR_027663	chr2,chr2	-,+	TIGD1,EFHD1	-55676,-187
chr4:25570678-25571315	chr4	+	25570684	25571114	True	NM_015187,NM_001177998	chr4,chr4	-,+	SEL1L3,SLC34A2	293546,86320
chr11:124607232-124608369	chr11	+	124607329	124608215	True	NM_001126181,NM_006176,NM_014312	chr11,chr11,chr11	+,+,-	NRGN,NRGN,VSIG2	1613,1613,13944
chr7:149190834-149191317	chr7	+	149190927	149191261	True	NR_036573,NM_001163474,NM_152557	chr7,chr7,chr7	+,-,-	LOC155060,ZNF746,ZNF746	-208608,3687,3687
chr11:65820869-65821802	chr11	+	65820893	65821069	True	NM_033036,NM_006842	chr11,chr11	-,+	GAL3ST3,SF3B2	-4242,-1128
chr6:26247498-26248219	chr6	+	26247792	26247993	True	NM_003547,NM_021018,NM_003540,NM_003524	chr6,chr6,chr6,chr6	-,-,+,+	HIST1H4G,HIST1H3F,HIST1H4F,HIST1H2BH	-587,2895,-7198,3885
chr8:86156689-86157362	chr8	+	86156909	86157287	True	NM_001099673,NM_198584	chr8,chr8	-,+	C8orf59,CA13	-24266,428
chr3:170275347-170276079	chr3	+	170275351	170275874	True	NM_020949,NM_001185056	chr3,chr3	-,+	SLC7A14,CLDN11	28039,-136374
chr6:3446006-3446243	chr6	+	3446141	3446291	True	NM_021945,NM_001128592	chr6,chr6	-,+	SLC22A23,PSMG4	-923,-187030
chr11:134200034-134200738	chr11	+	134200121	134200758	True	NM_138342,NM_199298	chr11,chr11	+,-	GLB1L2,THYN1	1009,-76861
chr1:156122039-156122420	chr1	+	156122168	156122420	True	NM_001093725,NM_001193302,NM_001193301,NM_001193300,NM_022367	chr1,chr1,chr1,chr1,chr1	-,+,+,+,+	MEX3A,SEMA4A,SEMA4A,SEMA4A,SEMA4A	-70379,948,-2484,901,901
chr12:13028521-13028935	chr12	+	13028527	13028983	True	NM_018654,NR_003932	chr12,chr12	-,+	GPRC5D,RPL13AP20	74385,-167
chr6:41196434-41196953	chr6	+	41196619	41196747	True	NM_198153,NR_027256	chr6,chr6	+,-	TREML4,TREML3	-608,-10934
chr6:24781285-24782304	chr6	+	24781693	24782036	True	NM_030939,NM_015895	chr6,chr6	-,+	C6orf62,GMNN	-62290,-6580
chr19:14597358-14597741	chr19	+	14597392	14597467	True	NM_001146693,NM_202469,NM_202468,NM_005716,NM_202494,NM_202467,NM_202470	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,-,-,-,-,-	LOC100130932,GIPC1,GIPC1,GIPC1,GIPC1,GIPC1,GIPC1	2290,9534,9534,9534,9534,9534,9534
chr7:64756236-64757249	chr7	+	64756619	64757048	True	NM_001007253,NM_007139	chr7,chr7	-,+	ERV3,ZNF92	-289495,81719
chr12:56322316-56322659	chr12	+	56322493	56322625	True	NM_001345,NM_032345,NM_001143853,NM_201554,NM_201444,NM_201445	chr12,chr12,chr12,chr12,chr12,chr12	+,-,-,+,+,+	DGKA,WIBG,WIBG,DGKA,DGKA,DGKA	2320,-796,-1584,3186,3186,3186
chr1:52082662-52082958	chr1	+	52082720	52082880	True	NM_148909,NM_148908,NM_001981,NM_024586,NM_148906,NR_036662	chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,+,+,+	OSBPL9,OSBPL9,EPS15,OSBPL9,OSBPL9,OSBPL9	-225,-225,-97725,-225,-225,-225
chr3:120402721-120403441	chr3	+	120402726	120403137	True	NM_000187,NM_005513	chr3,chr3	-,+	HGD,GTF2E1	-1308,58420
chr2:227704255-227705058	chr2	+	227704276	227705068	True	NM_001167608,NM_032276,NM_005544	chr2,chr2,chr2	+,+,-	RHBDD1,RHBDD1,IRS1	-3665,-3665,-40770
chr15:41117085-41117622	chr15	+	41117087	41117647	True	NM_017726,NM_001130143,NM_001077268	chr15,chr15,chr15	-,-,+	PPP1R14D,PPP1R14D,ZFYVE19	3310,3310,-17864
chr12:31908136-31909332	chr12	+	31908359	31909037	True	NR_004854,NM_001135863	chr12,chr12	-,+	AMN1,METTL20	-26251,-95802
chr6:105307774-105308238	chr6	+	105307881	105308277	True	NM_001004317,NM_020771	chr6,chr6	+,-	LIN28B,HACE1	96645,-87
chrX:3264339-3264592	chrX	+	3264338	3264610	True	NM_004042,NM_015419	chrX,chrX	+,-	ARSF,MXRA5	-279549,124
chr19:44125604-44126277	chr19	+	44125757	44126179	True	NM_001145641,NM_182498	chr19,chr19	+,-	SRRM5,ZNF428	-9555,-1743
chr3:75443502-75445093	chr3	+	75443783	75444921	True	NR_031714,NR_024241	chr3,chr3	+,-	MIR1324,FAM86DP	234992,39395
chr1:67632997-67634241	chr1	+	67633050	67634274	True	NM_001013674,NM_144701	chr1,chr1	-,+	C1orf141,IL23R	-38830,-935
chr19:7747711-7747919	chr19	+	7747742	7747962	True	NM_002002,NM_174894,NM_001042462,NM_001042461,NM_174918	chr19,chr19,chr19,chr19,chr19	-,+,+,+,+	FCER2,TRAPPC5,TRAPPC5,TRAPPC5,C19orf59	19120,-2032,-2086,-2029,-5850
chrY:24293369-24293822	chrY	+	24293451	24293843	True	NM_001006117,NR_002175,NR_001527	chrY,chrY,chrY	-,+,+	RBMY1J,TTTY6B,TTTY6	35296,-2370,-2392
chrY:24293369-24293822	chrY	-	24584874	24585266	False	NM_001006117,NR_002175,NR_001527	chrY,chrY,chrY	+,-,-	RBMY1J,TTTY6B,TTTY6	-35302,2370,2392
chr3:11622941-11624241	chr3	+	11622955	11624050	True	NM_006395,NM_001128220	chr3,chr3	+,-	ATG7,VGLL4	-308996,99
chr17:75472712-75473645	chr17	+	75472888	75473638	True	NM_001113495,NR_036200	chr17,chr17	+,-	SEPT9,MIR4316	-1614,-79752
chr7:129928831-129929908	chr7	+	129928834	129929460	True	NM_032842,NM_001163446,NM_016352	chr7,chr7,chr7	-,+,+	TMEM209,CPA4,CPA4	-83496,3513,3513
chr8:28177687-28178087	chr8	+	28177864	28178065	True	NM_018660,NM_006228	chr8,chr8	-,+	ZNF395,PNOC	65969,-3266
chr19:19495446-19495812	chr19	+	19495506	19495850	True	NM_172231,NM_017660	chr19,chr19	-,+	SUGP1,GATAD2A	-64199,791
chr10:75457171-75457653	chr10	+	75457267	75457605	True	NM_001144000,NM_004922	chr10,chr10	-,+	AGAP5,SEC24C	-1,46525
chr19:50082062-50083634	chr19	+	50082242	50083683	True	NM_000951,NM_015953	chr19,chr19	+,-	PRRG2,NOSIP	903,171
chr4:102736344-102738259	chr4	+	102736355	102738283	True	NM_001083907,NM_001130692	chr4,chr4	+,-	BANK1,PPP3CA	-1423,-467727
chr17:75470437-75471191	chr17	+	75470468	75470966	True	NM_001113495,NR_036200	chr17,chr17	+,-	SEPT9,MIR4316	358,-77332
chr17:36911820-36912153	chr17	+	36911976	36912202	True	NM_007144,NM_002795	chr17,chr17	-,+	PCGF2,PSMB3	-7418,-3026
chr2:10830409-10830650	chr2	+	10830562	10830654	True	NM_001039362,NM_024894	chr2,chr2	+,-	ATP6V1C2,NOL10	31120,-450
chr17:50236806-50237130	chr17	+	50236850	50237150	True	NM_001082534,NM_020178,NM_001082533,NM_016001	chr17,chr17,chr17,chr17	-,-,-,+	CA10,CA10,CA10,UTP18	277,-718,61,-899004
chr19:5687959-5688863	chr19	+	5688082	5688584	True	NM_205767,NM_198708,NM_033643,NM_198533,NM_015414,NM_198706,NM_198707,NM_198704,NM_198705	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,+,+,+,+,+,+,+,+	C19orf70,HSD11B1L,RPL36,HSD11B1L,RPL36,HSD11B1L,HSD11B1L,HSD11B1L,HSD11B1L	-7171,-7058,1687,-7086,1761,-7058,-7081,-7098,-7098
chr17:41045175-41046950	chr17	+	41045370	41046794	True	NM_000151,NR_027254	chr17,chr17	+,-	G6PC,LOC388387	6020,4007
chr8:22929281-22929669	chr8	+	22929332	22929668	True	NM_003842,NM_147187,NR_027140,NM_003841	chr8,chr8,chr8,chr8	-,-,-,+	TNFRSF10B,TNFRSF10B,TNFRSF10B,TNFRSF10C	-2632,-2632,-2632,30658
chr6:82463246-82463532	chr6	+	82463329	82463527	True	NM_006670,NM_017633	chr6,chr6	+,-	TPBG,FAM46A	609395,-901
chr2:54680839-54682555	chr2	+	54681167	54682510	True	NM_003128,NM_001003937	chr2,chr2	+,-	SPTBN1,TSPYL6	943,-197758
chr17:17284260-17285813	chr17	+	17284496	17285852	True	NM_003653,NM_020201	chr17,chr17	-,+	COPS3,NT5M	-99879,-77869
chr1:48458699-48459185	chr1	+	48458706	48459224	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	3388,229132
chr6:15038632-15039122	chr6	+	15038670	15039160	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	207366,624179
chr7:31006550-31008104	chr7	+	31006566	31008096	True	NM_001202481,NM_000823	chr7,chr7	-,+	CRHR2,GHRHR	-266847,-2981
chr21:44868958-44869497	chr21	+	44868992	44869498	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	405,-21990
chr4:5893590-5893853	chr4	+	5893621	5893857	True	NM_001313,NM_153717,NM_001014809	chr4,chr4,chr4	-,+,-	CRMP1,EVC,CRMP1	-3306,-180748,978
chrX:48050913-48051217	chrX	+	48051005	48051236	True	NM_175723,NM_021015,NM_001079900	chrX,chrX,chrX	-,-,+	SSX5,SSX5,SPACA5B	5020,5020,-61017
chr1:48463502-48465074	chr1	+	48463665	48465090	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	-1103,223266
chr14:88791363-88791943	chr14	+	88791407	88791927	True	NM_021161,NM_001040428,NM_138317	chr14,chr14,chr14	-,+,-	KCNK10,SPATA7,KCNK10	1379,60060,-1814
chrX:118925507-118925787	chrX	+	118925521	118925777	True	NM_001000,NR_002584,NM_001105576	chrX,chrX,chrX	-,-,+	RPL39,SNORA69,ANKRD58	-1,-4074,-32996
chr10:128592417-128593397	chr10	+	128592420	128593437	True	NM_001004298,NM_001380	chr10,chr10	-,+	C10orf90,DOCK1	-382410,585
chr2:227662753-227663032	chr2	+	227662780	227662934	True	NM_001167608,NM_005544	chr2,chr2	+,-	RHBDD1,IRS1	37736,622
chr21:47602082-47602473	chr21	+	47602087	47602449	True	NR_002776,NM_001142854,NM_032261	chr21,chr21,chr21	+,-,-	MCM3AP-AS1,C21orf56,C21orf56	46708,1974,1974
chr1:52455081-52455388	chr1	+	52455122	52455312	True	NM_002867,NM_001136497	chr1,chr1	-,+	RAB3B,BTF3L4	1174,66544
chr10:20106675-20106895	chr10	+	20106746	20106822	True	NM_006393,NM_032812	chr10,chr10	-,+	NEBL,PLXDC2	1079759,-1425
chr15:65475474-65476706	chr15	+	65476016	65476717	True	NM_001101362,NM_006660	chr15,chr15	+,-	KBTBD13,CLPX	-106913,896
chr15:28985083-28985312	chr15	+	28985088	28985236	True	NR_033351,NR_026589	chr15,chr15	-,+	GOLGA8F,WHAMML2	-206945,-2410
chr15:28985083-28985312	chr15	-	23206217	23206365	False	NR_024074,NR_003521	chr15,chr15	+,-	GOLGA8IP,WHAMML1	48876,2042
chr7:104637567-104638345	chr7	+	104637568	104638231	True	NR_024586,NM_018682	chr7,chr7	-,+	LOC100216545,MLL5	16414,16405
chr6:36214961-36215817	chr6	+	36215056	36215718	True	NM_001010903,NM_001145716,NM_173676	chr6,chr6,chr6	-,+,+	C6orf222,PNPLA1,PNPLA1	88994,-4127,-4162
chr17:37895458-37895877	chr17	+	37895515	37895599	True	NM_032339,NM_001030002,NM_005310	chr17,chr17,chr17	-,+,+	C17orf37,GRB7,GRB7	-8727,-976,-1379
chr19:45027607-45029330	chr19	+	45027743	45029229	True	NM_001102598,NM_001102599,NM_001205280,NM_001102600,NM_001102597	chr19,chr19,chr19,chr19,chr19	-,-,+,-,-	CEACAM20,CEACAM20,LOC147710,CEACAM20,CEACAM20	4369,4369,87710,4369,4369
chr11:118401411-118401642	chr11	+	118401433	118401523	True	NM_001144038,NM_001144035,NM_001144034,NM_001144037,NM_001144036,NM_001080441,NM_001168618,NM_032780	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,+,-,+	TMEM25,TMEM25,TMEM25,TMEM25,TMEM25,TTC36,IFT46,TMEM25	279,279,279,279,279,-3274,35318,279
chr12:22788674-22790141	chr12	+	22788691	22790091	True	NM_014802,NM_018638	chr12,chr12	-,+	KIAA0528,ETNK1	-91239,-10682
chr20:32891362-32891656	chr20	+	32891376	32891523	True	NM_001672,NM_000687,NM_001161766	chr20,chr20,chr20	+,-,-	ASIP,AHCY,AHCY	-43256,-161,8142
chr1:10458689-10458903	chr1	+	10458688	10458836	True	NM_004401,NM_002631	chr1,chr1	-,+	DFFA,PGD	73827,248
chr5:34191469-34191963	chr5	+	34191555	34191749	True	NM_016568,NR_037951	chr5,chr5	+,-	RXFP3,C1QTNF3-AMACR	-255115,-66922
chr8:38035022-38035266	chr8	+	38035125	38035247	True	NM_001204878,NM_004874,NM_014462	chr8,chr8,chr8	+,+,-	BAG4,BAG4,LSM1	-1078,-1078,-1099
chr2:62077385-62078168	chr2	+	62077948	62078017	True	NR_037710,NM_032180,NM_001201543,NM_152516	chr2,chr2,chr2,chr2	-,-,-,+	FAM161A,FAM161A,FAM161A,COMMD1	3318,3318,3318,54785
chr8:8011508-8012162	chr8	+	8011692	8011784	True	NR_031689,NR_024362	chr8,chr8	-,+	MIR548I3,FLJ10661	-65081,74307
chr8:8011508-8012162	chr8	-	12368916	12368990	False	NR_026789,NM_001137610	chr8,chr8	+,-	FAM66A,FAM86B2	-149441,-75064
chr5:80693284-80693676	chr5	+	80693298	80693654	True	NM_032280,NM_130767	chr5,chr5	+,-	ZCCHC9,ACOT12	-95949,-3310
chr16:22538721-22540183	chr16	+	22539455	22539530	True	NM_001135865,NR_027460	chr16,chr16	+,-	LOC100132247,RRN3P3	-14665,-90419
chr16:22538721-22540183	chr16	-	21422018	21422093	False	NR_026675,NM_130464	chr16,chr16	+,-	NCRNA00169,NPIPL3	-109902,14618
chr16:22538721-22540183	chr16	-	21854470	21854545	False	NM_003366,NR_003370	chr16,chr16	+,-	UQCRC2,RRN3P1	110063,-23975
chr16:22538721-22540183	chr16	-	29502551	29502626	False	NR_002557,NM_177552	chr16,chr16	-,+	LOC613038,SULT1A3	-23652,-31398
chr16:22538721-22540183	chr16	-	30242524	30242599	False	NR_002555,NM_177552	chr16,chr16	-,+	LOC613037,SULT1A3	14386,-32029
chr3:28291936-28293424	chr3	+	28292165	28293463	True	NM_022461,NM_182523	chr3,chr3	-,+	AZI2,CMC1	97205,-9099
chr2:198716003-198716832	chr2	+	198716136	198716869	True	NM_006226,NM_197970	chr2,chr2	+,-	PLCL1,BOLL	-46774,-65198
chr2:234184357-234186260	chr2	+	234184361	234186101	True	NR_003008,NM_018218	chr2,chr2	+,-	SCARNA5,USP40	-40,288185
chr13:110961089-110961356	chr13	+	110961125	110961301	True	NM_001845,NM_001846	chr13,chr13	-,+	COL4A1,COL4A2	-1629,-1545
chr6:8057356-8058627	chr6	+	8057524	8058671	True	NM_201280,NR_037616,NM_001199323,NM_001199322,NR_027712	chr6,chr6,chr6,chr6,chr6	-,-,-,-,+	MUTED,MUTED-TXNDC5,MUTED,MUTED,PIP5K1P1	6027,6027,6027,6027,-71245
chr21:37835442-37835932	chr21	+	37835537	37835719	True	NM_012130,NM_005441	chr21,chr21	-,+	CLDN14,CHAF1B	3056,-77899
chr12:122107466-122108735	chr12	+	122107609	122108194	True	NM_001080825,NM_173855	chr12,chr12	+,-	TMEM120B,MORN3	42463,-49
chr12:1800611-1802175	chr12	+	1800908	1801810	True	NM_024551,NR_037422	chr12,chr12	+,-	ADIPOR2,MIR3649	-717,-31362
chr1:155909656-155911555	chr1	+	155909854	155911518	True	NM_014949,NM_181885	chr1,chr1	-,+	KIAA0907,RXFP4	-5666,-39
chr2:74119921-74120213	chr2	+	74120020	74120208	True	NM_001199893,NM_001615,NM_003584	chr2,chr2,chr2	+,+,-	ACTG2,ACTG2,DUSP11	6,6,-112736
chr2:27853076-27854389	chr2	+	27853674	27854420	True	NM_001145047,NR_026735,NM_001142683,NM_007266,NM_024584,NM_001145049,NM_001145048	chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,+,-,+,-,+,+	GPN1,GPN1,CCDC121,GPN1,CCDC121,GPN1,GPN1	-2210,-1862,-1929,-1862,-1776,-2210,-2210
chr19:52149264-52149744	chr19	+	52149270	52149738	True	NR_029843,NM_001098612	chr19,chr19	+,-	MIR99B,SIGLEC14	46126,444
chr19:52149264-52149744	chr19	+	52132846	52133314	False	NM_007147,NM_003830	chr19,chr19	+,-	ZNF175,SIGLEC5	-58366,463
chr11:64866380-64866781	chr11	+	64866589	64866805	True	NM_013265,NM_080668	chr11,chr11	+,-	C11orf2,CDCA5	-2957,-14974
chr4:25525479-25526589	chr4	+	25525914	25526634	True	NM_015187,NM_001177998	chr4,chr4	-,+	SEL1L3,SLC34A2	338032,130800
chr2:103103328-103104711	chr2	+	103103332	103104598	True	NM_001011552,NM_032718	chr2,chr2	+,-	SLC9A4,MFSD9	-13621,248789
chr1:115043734-115045422	chr1	+	115043928	115044995	True	NM_003176,NM_015906,NM_033020	chr1,chr1,chr1	+,-,-	SYCP1,TRIM33,TRIM33	352459,8836,8836
chr14:55492105-55493627	chr14	+	55492386	55493485	True	NM_199421,NM_007086,NM_001008396,NM_080867	chr14,chr14,chr14,chr14	+,-,-,+	SOCS4,WDHD1,WDHD1,SOCS4	358,384,384,358
chr4:156785747-156787739	chr4	+	156785748	156787761	True	NM_005651,NM_017419	chr4,chr4	+,-	TDO2,ACCN5	37085,124
chr2:234651211-234652526	chr2	+	234651257	234652397	True	NM_019093,NM_001001394	chr2,chr2	+,-	UGT1A3,DNAJB3	-13535,314
chr4:108849999-108850449	chr4	+	108850001	108850315	True	NM_005443,NM_183075	chr4,chr4	-,+	PAPSS1,CYP2U1	-208582,2401
chr4:123843665-123844007	chr4	+	123843712	123844051	True	NM_198041,NM_007083,NM_145207	chr4,chr4,chr4	-,-,+	NUDT6,NUDT6,SPATA5	122,-13,173
chr3:195887044-195887398	chr3	+	195887165	195887444	True	NR_034088,NM_001039617	chr3,chr3	+,-	LOC401109,ZDHHC19	-17715,50906
chr12:53493072-53493385	chr12	+	53493120	53493338	True	NM_002178,NM_003578,NM_032840	chr12,chr12,chr12	+,+,-	IGFBP6,SOAT2,SPRYD3	-1735,3935,-19916
chr17:4458756-4459406	chr17	+	4458763	4459212	True	NM_198501,NM_001122890,NM_014520,NM_153338,NM_001105538	chr17,chr17,chr17,chr17,chr17	+,-,-,-,-	SMTNL2,GGT6,MYBBP1A,GGT6,MYBBP1A	28063,4719,-82,4719,-82
chr9:71328237-71329775	chr9	+	71328386	71329768	True	NM_003558,NM_153237	chr9,chr9	+,-	PIP5K1B,C9orf71	-7828,-172603
chr1:159406427-159406965	chr1	+	159406476	159407015	True	NM_012351,NM_001004469	chr1,chr1	+,-	OR10J1,OR10J5	2496,98833
chr4:1281659-1282402	chr4	+	1281777	1282449	True	NM_001328,NM_001017405,NM_005882	chr4,chr4,chr4	-,+,+	CTBP1,MAEA,MAEA	-38869,1222,1222
chr3:128713919-128714737	chr3	+	128713928	128714614	True	NM_020741,NM_024768	chr3,chr3	-,+	KIAA1257,CCDC48	-942,5857
chr7:117512324-117512596	chr7	+	117512424	117512610	True	NM_033427,NM_016200	chr7,chr7	-,+	CTTNBP2,NAA38	1001,311475
chr22:32548688-32550434	chr22	+	32548853	32550476	True	NM_001010859,NR_033411	chr22,chr22	-,+	C22orf42,SLC5A1	4822,-93748
chr22:32548688-32550434	chr22	-	29802620	29804253	False	NM_145730,NM_021026	chr22,chr22	-,+	AP1B1,RFPL1	-18048,30318
chr19:37705116-37705507	chr19	+	37705150	37705424	True	NM_152279,NM_152604	chr19,chr19	-,+	ZNF585B,ZNF383	-3699,11941
chr2:48666339-48667408	chr2	+	48666377	48667299	True	NM_152994,NM_000233,NM_001193475,NM_001135629,NR_024188	chr2,chr2,chr2,chr2,chr2	+,-,+,+,+	KLRAQ1,LHCGR,KLRAQ1,KLRAQ1,KLRAQ1	608,315638,608,608,608
chr12:109534933-109535263	chr12	+	109535062	109535258	True	NM_001205179,NM_080911,NM_001205180,NM_001145375,NM_001145374,NM_003362,NM_001001655,NR_026930,NR_026931	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,+,-,-,-,+,-,-,-	ALKBH2,UNG,ALKBH2,ALKBH2,ALKBH2,UNG,ALKBH2,ALKBH2,ALKBH2	-3769,140,-3769,-3769,-3769,664,-3769,-3769,-3769
chr16:57503202-57503629	chr16	+	57503304	57503648	True	NM_018110,NM_032940	chr16,chr16	-,+	DOK4,POLR2C	16787,-6804
chr17:74867777-74868559	chr17	+	74867877	74868519	True	NM_144677,NM_198955,NM_001199172,NR_036608	chr17,chr17,chr17,chr17	+,+,+,-	MGAT5B,MGAT5B,MGAT5B,SRSF2	-3130,209,-3130,-134384
chr17:43226090-43226731	chr17	+	43226196	43226620	True	NM_133373,NM_006460	chr17,chr17	-,+	PLCD3,HEXIM1	-16305,-1563
chr1:36347013-36347335	chr1	+	36347257	36347363	True	NM_012199,NM_022111	chr1,chr1	+,-	EIF2C1,CLSPN	1446,-111706
chr4:190883992-190885251	chr4	+	190884237	190884901	True	NM_020040,NM_004477	chr4,chr4	-,+	TUBB4Q,FRG1	21173,-22314
chr16:75182412-75182677	chr16	+	75182462	75182682	True	NM_194436,NM_153688	chr16,chr16	-,+	LDHD,ZFP1	-31792,-92
chr12:50476660-50477917	chr12	+	50476790	50477722	True	NM_003076,NM_139071,NM_013277	chr12,chr12,chr12	+,+,-	SMARCD1,SMARCD1,RACGAP1	1260,1260,-57483
chr16:69365209-69366175	chr16	+	69365692	69365810	True	NM_022341,NM_001199434,NM_016101,NM_032382	chr16,chr16,chr16,chr16	-,+,+,-	PDF,NIP7,NIP7,COG8	-1194,7604,7604,7766
chr2:68701959-68703469	chr2	+	68702133	68703169	True	NM_173545,NM_001024680	chr2,chr2	+,-	APLF,FBXO48	-7501,-7743
chr19:43100860-43101515	chr19	+	43100874	43101380	True	NM_001816,NR_036584	chr19,chr19	-,+	CEACAM8,LOC100289650	-1792,224634
chr2:231904871-231906040	chr2	+	231904899	231905981	True	NR_033879,NM_001144994	chr2,chr2	-,+	LOC348761,C2orf72	-44152,-2669
chr5:173120850-173121365	chr5	+	173120898	173121352	True	NR_027109,NM_138369	chr5,chr5	+,-	LOC285593,BOD1	-114293,-77232
chrX:13588303-13588561	chrX	+	13588328	13588562	True	NM_001011658,NM_001167890,NM_015507	chrX,chrX,chrX	-,+,+	TRAPPC2,EGFL6,EGFL6	164242,-685,-685
chr5:78910219-78912003	chr5	+	78910314	78911526	True	NM_001114393,NM_004272,NM_001114394,NM_173797	chr5,chr5,chr5,chr5	+,-,+,+	PAPD4,HOMER1,PAPD4,PAPD4	-2130,-100614,-2130,-2130
chr11:40301904-40302438	chr11	+	40301927	40302485	True	NM_020929,NM_001142930	chr11,chr11	-,+	LRRC4C,API5	13230,3031019
chr18:3260392-3260982	chr18	+	3260477	3260899	True	NM_001144945,NM_001144944,NM_033546,NM_019856	chr18,chr18,chr18,chr18	+,+,+,-	MYL12B,MYL12B,MYL12B,MYOM1	1817,1711,1211,-40371
chr5:55293134-55295082	chr5	+	55293478	55294765	True	NM_002184,NM_001190981,NM_175767,NM_139017	chr5,chr5,chr5,chr5	-,-,-,+	IL6ST,IL6ST,IL6ST,IL31RA	-2657,-2657,-2657,-146201
chr5:131592496-131592884	chr5	+	131592523	131592883	True	NM_001131027,NM_001142599,NM_003687	chr5,chr5,chr5	+,-,+	PDLIM4,P4HA2,PDLIM4	467,-28967,467
chr1:57207408-57209187	chr1	+	57207407	57209123	True	NM_006252,NM_001004303	chr1,chr1	+,-	PRKAA2,C1orf168	-96473,76306
chr1:151127529-151128498	chr1	+	151127589	151128296	True	NM_024575,NM_001204848,NM_001178062,NM_030913,NM_001178061	chr1,chr1,chr1,chr1,chr1	+,+,-,-,-	TNFAIP8L2,TNFAIP8L2-SCNM1,SEMA6C,SEMA6C,SEMA6C	808,808,-8449,-8449,-8449
chr19:56159858-56160420	chr19	+	56160081	56160451	True	NM_007279,NM_001012478,NM_016202,NM_013301,NM_001163423,NM_203374,NM_207115,NM_016535	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,-,+,+	U2AF2,U2AF2,ZNF580,CCDC106,ZNF580,ZNF784,ZNF580,ZNF581	4964,4964,-6714,-1178,-6669,-24140,-7740,-5146
chr5:139550107-139551278	chr5	+	139550393	139551135	True	NM_013983,NM_032412	chr5,chr5	-,+	NRG2,C5orf32	-127509,3517
chrX:83442406-83442615	chrX	+	83442445	83442596	True	NM_021118,NM_014496	chrX,chrX	+,-	CYLC1,RPS6KA6	-326326,397
chrX:85397530-85398819	chrX	+	85397710	85398812	True	NM_053281,NM_001145414,NM_001139514	chrX,chrX,chrX	+,-,+	DACH2,CHM,DACH2	4642,-95144,4642
chr12:7248812-7249378	chr12	+	7248823	7249365	True	NR_026947,NM_001733	chr12,chr12	+,-	LOC283314,C1R	11538,-3780
chr13:114107630-114108003	chr13	+	114107645	114108041	True	NM_017905,NM_138430,NM_199162	chr13,chr13,chr13	+,-,-	TMCO3,ADPRHL1,ADPRHL1	37266,16,-4188
chr11:55653311-55653720	chr11	+	55653553	55653747	True	NM_032681,NM_001001960	chr11,chr11	+,-	SPRYD5,OR5W2	-2831,28361
chr7:105922895-105924656	chr7	+	105922915	105924457	True	NM_152750,NM_005746	chr7,chr7	+,-	CDHR3,NAMPT	-319314,1231
chr11:59245447-59245678	chr11	+	59245446	59245598	True	NM_001004705,NM_001001954	chr11,chr11	+,-	OR4D10,OR5A2	-600,-55020
chr15:42565686-42566036	chr15	+	42565738	42566072	True	NM_198141,NM_015497,NM_001110503	chr15,chr15,chr15	+,-,-	GANC,TMEM87A,TMEM87A	293,-11,-11
chr3:119810642-119812012	chr3	+	119810696	119811932	True	NM_002093,NM_001146156,NM_022002	chr3,chr3,chr3	-,-,+	GSK3B,GSK3B,NR1I2	1384,1384,-309191
chr19:18315223-18315686	chr19	+	18315332	18315693	True	NM_002866,NM_032683	chr19,chr19	-,+	RAB3A,MPV17L2	-458,-11350
chr12:52828971-52830090	chr12	+	52829037	52830071	True	NM_004693,NM_002284	chr12,chr12	-,+	KRT75,KRT86	-927,-133439
chr13:76196175-76197590	chr13	+	76196323	76197023	True	NM_005358,NM_203497	chr13,chr13	+,-	LMO7,COMMD6	-1809,-84332
chr4:122871563-122871869	chr4	+	122871677	122871831	True	NM_001130698,NM_005033	chr4,chr4	-,+	TRPC3,EXOSC9	1128,-149257
chr11:129902875-129903091	chr11	+	129902936	129903130	True	NM_199437,NR_024233	chr11,chr11	-,+	PRDM10,NCRNA00167	-30206,-30468
chr8:109095083-109095288	chr8	+	109095131	109095287	True	NM_178565,NM_014673	chr8,chr8	-,+	RSPO2,TTC35	676,360565
chr12:121739371-121740414	chr12	+	121739745	121740285	True	NM_002560,NM_153500,NM_153499,NM_172214,NM_172215,NM_172216,NM_006549,NM_172226	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,-,-,-,-,-,-,-	P2RX4,CAMKK2,CAMKK2,CAMKK2,CAMKK2,CAMKK2,CAMKK2,CAMKK2	-92143,-3634,-3634,-3634,-3634,-3634,-3634,-5189
chr12:90050483-90050965	chr12	+	90050482	90051003	True	NM_001682,NM_001001323,NR_028138	chr12,chr12,chr12	-,-,+	ATP2B1,ATP2B1,LOC338758	-638,-638,51728
chr2:99550303-99551920	chr2	+	99550593	99551947	True	NM_207362,NM_144706	chr2,chr2	-,+	C2orf55,C2orf15	787,206237
chr11:125461010-125461926	chr11	+	125461396	125461942	True	NM_001612,NM_152713	chr11,chr11	-,+	ACRV1,STT3A	88901,796
chr10:121300057-121300855	chr10	+	121300195	121300871	True	NM_001005339,NM_004281,NM_002925	chr10,chr10,chr10	-,+,-	RGS10,BAG3,RGS10	1401,110010,-4150
chr8:122149703-122150884	chr8	+	122149728	122150639	True	NR_002835,NM_021021	chr8,chr8	+,-	HAS2-AS1,SNTB1	500946,-325419
chr5:109033934-109034439	chr5	+	109033995	109034467	True	NM_014819,NM_002372	chr5,chr5	-,+	PJA2,MAN2A1	-288320,-8892
chr16:2655612-2655898	chr16	+	2655817	2655897	True	NR_036139,NR_015441	chr16,chr16	-,+	MIR3178,LOC652276	-73811,-2494
chr16:2655612-2655898	chr16	+	2735075	2735145	False	NM_031948,NM_018992	chr16,chr16	-,+	PRSS27,KCTD5	35459,-2645
chr12:111472878-111473165	chr12	+	111472891	111472976	True	NM_000432,NM_015267	chr12,chr12	-,+	MYL2,CUX2	-114487,-1114
chr20:33872886-33873353	chr20	+	33872908	33873342	True	NM_006690,NM_002212,NM_181466,NM_181468,NM_178468	chr20,chr20,chr20,chr20,chr20	+,-,-,-,-	MMP24,EIF6,EIF6,EIF6,FAM83C	-58420,-314,-314,-402,6933
chr17:47652513-47652808	chr17	+	47652570	47652736	True	NM_001007226,NM_007225	chr17,chr17	-,+	SPOP,NXPH3	102839,561
chr14:60711990-60713297	chr14	+	60712182	60713316	True	NM_177951,NM_177952,NM_016029,NM_021003	chr14,chr14,chr14,chr14	+,+,-,+	PPM1A,PPM1A,DHRS7,PPM1A	2649,186,-79971,2649
chr2:9979124-9979581	chr2	+	9979249	9979465	True	NM_006826,NM_005680	chr2,chr2	-,+	YWHAQ,TAF1B	-208143,4105
chr8:27950597-27951974	chr8	+	27950601	27951832	True	NM_018091,NM_001010906	chr8,chr8	+,-	ELP3,C8orf80	-70,-9213
chr8:145690035-145690268	chr8	+	145690073	145690229	True	NM_145754,NM_138496,NM_032687,NM_001129888	chr8,chr8,chr8,chr8	+,-,-,-	KIFC2,CYHR1,CYHR1,CYHR1	1508,239,670,852
chrX:117859251-117861247	chrX	+	117859399	117861105	True	NM_001560,NM_020721	chrX,chrX	+,-	IL13RA1,KIAA1210	453,423487
chr14:21905781-21906550	chr14	+	21905911	21906169	True	NM_020920,NM_014828,NM_001170629	chr14,chr14,chr14	-,+,-	CHD8,TOX4,CHD8	-454,39165,-6044
chr12:64236828-64237405	chr12	+	64236944	64237318	True	NM_020762,NM_173812	chr12,chr12	+,-	SRGAP1,DPY19L2	1222,-174590
chr11:129766758-129767968	chr11	+	129766876	129768000	True	NM_138788,NM_001143835,NM_006165	chr11,chr11,chr11	+,-,-	TMEM45B,NFRKB,NFRKB	-81201,-1386,-3972
chr8:110375161-110375941	chr8	+	110375239	110375975	True	NM_177531,NM_032869	chr8,chr8	+,-	PKHD1L1,NUDCD1	-584,-28889
chr13:97881618-97882124	chr13	+	97881621	97882139	True	NM_144778,NM_080818,NM_207304	chr13,chr13,chr13	+,-,+	MBNL2,OXGR1,MBNL2	-7106,-235017,-7106
chr6:37662976-37663688	chr6	+	37662982	37663587	True	NM_153487,NM_021943	chr6,chr6	-,+	MDGA1,ZFAND3	2230,123719
chr2:3528329-3528931	chr2	+	3528452	3528878	True	NM_001011,NM_018269	chr2,chr2	+,-	RPS7,ADI1	93974,-5102
chr2:73343359-73345025	chr2	+	73343404	73344500	True	NM_015470,NM_001134462	chr2,chr2	-,+	RAB11FIP5,NOTO	-3258,84885
chr19:57683352-57683600	chr19	+	57683588	57683648	True	NM_001012729,NM_003417	chr19,chr19	-,+	DUXA,ZNF264	-4732,19219
chr4:3251398-3251813	chr4	+	3251569	3251821	True	NM_001042690,NM_002337	chr4,chr4	+,-	C4orf44,LRPAP1	-853,282453
chr5:141704228-141704462	chr5	+	141704285	141704439	True	NM_030571,NM_001127496,NM_030964	chr5,chr5,chr5	+,-,-	NDFIP1,SPRY4,SPRY4	-216012,231,231
chr4:57687233-57687683	chr4	+	57687337	57687567	True	NM_021114,NM_005612	chr4,chr4	-,+	SPINK2,REST	376,86474
chr21:46358104-46358412	chr21	+	46358330	46358452	True	NM_058190,NR_027128,NR_027129,NM_001127491	chr21,chr21,chr21,chr21	+,-,-,-	C21orf70,C21orf67,C21orf67,ITGB2	1502,1426,1426,-9577
chr19:58095062-58095499	chr19	+	58095110	58095545	True	NM_001010879,NM_017879	chr19,chr19	+,-	ZIK1,ZNF416	82,-4867
chr2:85201621-85201919	chr2	+	85201643	85201737	True	NM_020122,NM_001080824	chr2,chr2	+,-	KCMF1,C2orf89	-3463,-93391
chr2:242448876-242449767	chr2	+	242448885	242449795	True	NM_032515,NM_006374	chr2,chr2	+,-	BOK,STK25	48396,-851
chr2:111878396-111878782	chr2	+	111878486	111878786	True	NM_138624,NR_015395,NM_138623,NM_001204106,NM_207003,NM_006538,NM_207002,NM_001204107,NM_001204113,NM_001204112,NM_001204111,NM_001204110,NM_138627,NM_138626,NM_138625,NM_138622,NM_001204108,NM_001204109,NM_138621	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,-,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+	BCL2L11,LOC541471,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11	-46,373956,-46,-46,-46,-46,-46,-46,-46,-46,-46,-46,-46,-46,-46,-46,-46,-46,-46
chr12:100381125-100381327	chr12	+	100381262	100381338	True	NM_152788,NR_031728	chr12,chr12	-,+	ANKS1B,MIR1827	-2830,202323
chr11:67085810-67086549	chr11	+	67085929	67086291	True	NM_021173,NR_024469	chr11,chr11	-,+	POLD4,LOC100130987	34813,-670
chr17:26570956-26571925	chr17	+	26571366	26571885	True	NR_002181,NR_028334	chr17,chr17	+,-	PPY2,FLJ40504	2584,62586
chr2:162920577-162921663	chr2	+	162920636	162921702	True	NM_001935,NM_012198	chr2,chr2	-,+	DPP4,GCA	9400,278880
chr17:26700181-26701219	chr17	+	26700281	26700991	True	NM_001080837,NM_000638,NM_015077	chr17,chr17,chr17	-,-,+	SEBOX,VTN,SARM1	-8016,-2908,-1345
chr11:64125734-64126100	chr11	+	64125894	64126092	True	NM_003942,NR_031602,NM_001006944,NM_016404	chr11,chr11,chr11,chr11	+,+,+,-	RPS6KA4,MIR1237,RPS6KA4,TRMT112	532,9981,532,-40861
chr12:109908310-109908537	chr12	+	109908310	109908548	True	NM_183415,NM_031954,NM_130466	chr12,chr12,chr12	+,-,+	UBE3B,KCTD10,UBE3B	6890,6657,6890
chr1:110756210-110757060	chr1	+	110756359	110757089	True	NR_036437,NM_001039574,NR_036595,NM_004978	chr1,chr1,chr1,chr1	+,+,-,+	KCNC4,KCNC4,LOC440600,KCNC4	-3075,-3075,124754,-3075
chr2:133174224-133174633	chr2	+	133174456	133174534	True	NM_001508,NR_027020	chr2,chr2	+,-	GPR39,ANKRD30BL	-363,-158914
chr10:25498629-25500283	chr10	+	25498733	25499786	True	NM_020752,NR_027333	chr10,chr10	+,-	GPR158,LOC100128811	-34494,-33528
chr17:7492637-7492869	chr17	+	7492686	7492856	True	NM_001251,NM_001040059,NM_004870,NM_006942,NR_024603	chr17,chr17,chr17,chr17,chr17	+,+,+,-,+	CD68,CD68,MPDU1,SOX15,MPDU1	-9932,-9931,-5772,682,-5772
chr4:153605004-153606893	chr4	+	153605175	153606909	True	NM_152680,NM_001025593	chr4,chr4	-,+	TMEM154,ARFIP1	-3858,94202
chr7:128210759-128211472	chr7	+	128210857	128211306	True	NM_183243,NR_024368	chr7,chr7	-,+	IMPDH1,FLJ45340	-160821,69988
chr17:79981168-79981403	chr17	+	79981351	79981421	True	NM_005052,NM_144998,NM_144999	chr17,chr17,chr17	+,-,+	RAC3,STRA13,LRRC45	8110,-578,-122
chr7:155762330-155762584	chr7	+	155762369	155762519	True	NM_000193,NM_053043	chr7,chr7	-,+	SHH,RBM33	-157402,-325217
chr1:151299609-151299827	chr1	+	151299702	151299876	True	NM_002651,NM_001198775,NM_001198774,NM_001198773,NM_020832	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	PI4KB,PI4KB,PI4KB,PI4KB,ZNF687	307,307,365,307,-44962
chr1:35545203-35545432	chr1	+	35545210	35545436	True	NM_024772,NM_007167	chr1,chr1	+,-	ZMYM1,ZMYM6	-289,-47641
chr1:66453590-66455097	chr1	+	66453680	66454453	True	NM_005478,NM_001037340	chr1,chr1	-,+	INSL5,PDE4B	812548,3936
chr15:25484555-25484938	chr15	+	25484580	25484784	True	NR_003344,NR_003358,NM_130838,NR_003353,NR_003352,NR_003351,NR_003350,NR_003357,NR_003356,NR_003355,NR_003354,NR_003302,NR_003303,NR_003348,NR_003349	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,-,+,+,+,+,+,+,+,+,+,+,+,+	SNORD115-29,SNORD115-43,UBE3A,SNORD115-38,SNORD115-37,SNORD115-36,SNORD115-35,SNORD115-42,SNORD115-41,SNORD115-40,SNORD115-39,SNORD115-10,SNORD115-11,SNORD115-33,SNORD115-34	-3399,-3399,165919,200,-1498,-3399,-5237,7707,5840,3976,2108,7707,-3399,-8646,-7097
chr14:100273304-100274362	chr14	+	100273375	100274385	True	NM_004434,NM_001144995	chr14,chr14	+,-	EML1,CCDC85C	-13681,-202648
chr11:118796810-118797460	chr11	+	118796875	118797213	True	NM_006760,NM_182557	chr11,chr11	+,-	UPK2,BCL9L	29794,-15262
chr14:93674378-93675077	chr14	+	93674480	93675104	True	NM_001100417,NM_175748,NM_032490	chr14,chr14,chr14	+,+,-	UBR7,UBR7,C14orf142	-1130,-1130,-1021
chr9:5342031-5343800	chr9	+	5342030	5343817	True	NM_014143,NM_006911	chr9,chr9	+,-	CD274,RLN1	106685,-2157
chr18:32409673-32411451	chr18	+	32409813	32411340	True	NM_001112734,NM_032980	chr18,chr18	-,+	ZSCAN30,DTNA	458917,-11563
chr14:51409024-51410499	chr14	+	51409077	51410472	True	NM_181814,NM_002863,NM_001163940	chr14,chr14,chr14	+,-,-	ABHD12B,PYGL,PYGL	-70250,827,827
chr7:15507479-15508436	chr7	+	15507480	15508458	True	NM_001195280,NM_001004320	chr7,chr7	+,-	LOC100506049,AGMO	1058046,93232
chr2:114515037-114515542	chr2	+	114515154	114515521	True	NM_013412,NM_025181	chr2,chr2	+,-	RABL2A,SLC35F5	-130397,-754
chr11:63535400-63535771	chr11	+	63535442	63535627	True	NM_138471,NM_001144936	chr11,chr11	+,-	C11orf84,C11orf95	45295,536
chr2:165811388-165811676	chr2	+	165811427	165811717	True	NM_001040142,NM_001199148,NM_173512	chr2,chr2,chr2	+,-,-	SCN2A,SLC38A11,SLC38A11	284194,369,369
chr11:2444994-2446075	chr11	+	2445152	2446030	True	NM_000218,NM_014555	chr11,chr11	+,-	KCNQ1,TRPM5	20190,-877
chr7:123508788-123510537	chr7	+	123509018	123510268	True	NM_003941,NM_012269	chr7,chr7	-,+	WASL,HYAL4	-119902,-23846
chr2:197458330-197459123	chr2	+	197458461	197459153	True	NM_020760,NM_001080539	chr2,chr2	-,+	HECW2,CCDC150	-1126,45202
chr7:143008892-143010860	chr7	+	143009080	143010414	True	NM_000083,NM_014690	chr7,chr7	+,-	CLCN1,FAM131B	2804,48815
chr10:35536029-35537074	chr10	+	35536112	35537067	True	NM_001198777,NM_181698	chr10,chr10	-,+	CUL2,CCNY	-156542,-210
chr12:11082150-11082725	chr12	+	11082228	11082737	True	NM_001110213,NM_023922,NM_005042	chr12,chr12,chr12	+,-,+	PRH2,TAS2R14,PRH2	-444,9120,-445
chr5:122848907-122849457	chr5	+	122848941	122849389	True	NM_001044722,NM_001044723,NM_001031812,NM_153223,NM_004384	chr5,chr5,chr5,chr5,chr5	+,+,+,-,+	CSNK1G3,CSNK1G3,CSNK1G3,CEP120,CSNK1G3	-1199,-1199,-1199,-89655,-1199
chr9:130615679-130616291	chr9	+	130615908	130616296	True	NM_000118,NM_001114753,NM_001018078	chr9,chr9,chr9	-,-,+	ENG,ENG,FPGS	801,801,-50451
chr15:89795893-89797376	chr15	+	89796174	89797317	True	NM_001113378,NM_000326,NM_018193	chr15,chr15,chr15	+,-,+	FANCI,RLBP1,FANCI	-9041,-31252,-9041
chrX:152907747-152907953	chrX	+	152907852	152907918	True	NM_001395,NM_001135740	chrX,chrX	+,-	DUSP9,PNCK	-6,30875
chr7:6388499-6389624	chr7	+	6388518	6389518	True	NM_006908,NM_001037163	chr7,chr7	+,-	RAC1,C7orf70	24607,72
chr6:12013785-12014448	chr6	+	12013786	12014497	True	NM_032744,NM_002114	chr6,chr6	-,+	C6orf105,HIVEP1	-234506,-1113
chrX:133593671-133593936	chrX	+	133593727	133593935	True	NM_000194,NR_030587	chrX,chrX	+,-	HPRT1,MIR450B	239,80407
chr19:48542006-48543061	chr19	+	48542162	48542960	True	NM_022142,NM_019855	chr19,chr19	+,-	ELSPBP1,CABP5	-44313,4400
chr14:60558244-60558587	chr14	+	60558312	60558580	True	NM_022495,NM_016029	chr14,chr14	+,-	C14orf135,DHRS7	48,73681
chr11:73472567-73473079	chr11	+	73472610	73472882	True	NM_198896,NM_016055,NM_002869	chr11,chr11,chr11	-,+,-	RAB6A,MRPL48,RAB6A	-409,26034,-409
chr11:65684727-65685040	chr11	+	65684927	65685085	True	NM_031450,NM_001135635,NM_006442	chr11,chr11,chr11	-,-,+	C11orf68,C11orf68,DRAP1	1496,1496,1642
chr4:123866913-123868512	chr4	+	123867108	123868533	True	NM_198041,NM_145207	chr4,chr4	-,+	NUDT6,SPATA5	-22985,-22934
chr13:107075994-107077046	chr13	+	107076006	107077044	True	NM_004093,NR_034119	chr13,chr13	-,+	EFNB2,LOC728192	110396,-47146
chr2:95831830-95832190	chr2	+	95831878	95832182	True	NM_021088,NM_001017396,NM_032788	chr2,chr2,chr2	+,+,-	ZNF2,ZNF2,ZNF514	-748,-748,-6615
chr2:171077061-171077931	chr2	+	171077289	171077964	True	NM_138995,NM_014168	chr2,chr2	+,-	MYO3B,METTL5	-42685,-395936
chr19:18670086-18670855	chr19	+	18670088	18670672	True	NM_001171949,NM_001171948,NM_012181,NM_024069	chr19,chr19,chr19,chr19	+,+,-,+	C19orf50,C19orf50,FKBP8,C19orf50	-1568,-1568,-15705,-1568
chr8:10529499-10529704	chr8	+	10529588	10529734	True	NM_001040032,NM_178857	chr8,chr8	+,-	C8orf74,RP1L1	412,-16971
chr5:140768879-140769285	chr5	+	140768902	140769242	True	NM_018925,NM_018920,NM_003736,NM_032099,NM_032098,NM_032088,NM_005642,NM_014004,NM_032087	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,-,+,+	PCDHGB5,PCDHGA7,PCDHGB4,PCDHGB5,PCDHGB4,PCDHGA8,TAF7,PCDHGA8,PCDHGA7	8452,-6486,-1501,8452,-1501,2240,-68551,2240,-6486
chr3:49236581-49237068	chr3	+	49236677	49236854	True	NM_178173,NM_001080528,NM_001135197	chr3,chr3,chr3	+,-,+	CCDC36,LOC646498,CCDC36	-867,-7386,78
chr4:672100-672484	chr4	+	672165	672533	True	NM_007100,NM_002477,NR_033743	chr4,chr4,chr4	-,+,-	ATP5I,MYL5,ATP5I	-4038,-505,-4038
chr9:32992163-32994010	chr9	+	32992176	32993513	True	NM_001195254,NR_036577,NM_001195252,NM_001195251,NM_001195250,NR_036579,NR_036578,NM_001195248,NM_001195249,NM_175069,NM_001539,NM_175073,NR_036576	chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,-,-,-,-,-,-,-,-,-,+,-,-	APTX,APTX,APTX,APTX,APTX,APTX,APTX,APTX,APTX,APTX,DNAJA1,APTX,APTX	8160,8189,8189,8189,8189,8124,8160,8189,8124,8189,31695,8189,8189
chr2:232396171-232396619	chr2	+	232396190	232396652	True	NM_006056,NM_152614	chr2,chr2	-,+	NMUR1,C2orf57	-1008,60922
chr2:182936063-182937736	chr2	+	182936298	182937435	True	NM_002500,NM_001080545	chr2,chr2	-,+	NEUROD1,PPP1R1C	-390906,-85799
chr7:149540285-149540908	chr7	+	149540311	149540805	True	NM_001099220,NR_027040	chr7,chr7	+,-	ZNF862,LOC401431	-4858,30196
chr10:72029043-72030580	chr10	+	72029047	72030613	True	NM_022146,NM_004096	chr10,chr10	-,+	NPFFR1,EIF4EBP2	12887,133247
chr2:99350106-99350796	chr2	+	99350710	99350828	True	NM_012214,NM_014044	chr2,chr2	-,+	MGAT4A,UNC50	-3121,-125726
chr9:14903839-14904737	chr9	+	14904148	14904768	True	NR_003920,NM_144966	chr9,chr9	+,-	LOC389705,FREM1	88556,6275
chr1:68697756-68698129	chr1	+	68697755	68698064	True	NM_024911,NM_001002292,NM_001193334,NM_001924	chr1,chr1,chr1,chr1	-,-,-,+	WLS,WLS,WLS,GADD45A	270,215,215,-546947
chr4:126238640-126239033	chr4	+	126238710	126239058	True	NM_024582,NM_001167882	chr4,chr4	+,-	FAT4,ANKRD50	-1194,-604823
chr12:56360035-56360236	chr12	+	56360042	56360256	True	NM_001798,NM_002868,NM_001200053,NM_006928,NM_001200054,NM_052827	chr12,chr12,chr12,chr12,chr12,chr12	+,+,-,-,-,+	CDK2,RAB5B,PMEL,PMEL,PMEL,CDK2	299,7605,-196,290,-196,299
chr15:102264416-102264683	chr15	+	102264459	102264677	True	NM_152334,NM_001005326	chr15,chr15	-,+	TARSL2,OR4F6	18,81245
chr12:49365993-49366215	chr12	+	49365997	49366215	True	NM_003394,NM_005430	chr12,chr12	-,+	WNT10B,WNT1	-356,6020
chr18:8361335-8362169	chr18	+	8361335	8361992	True	NM_001025300,NR_024419	chr18,chr18	+,-	RAB12,LOC100192426	247450,5090
chr14:96177728-96178802	chr14	+	96177831	96178748	True	NM_001098725,NM_004918,NM_021966	chr14,chr14,chr14	-,+,-	TCL1A,TCL1B,TCL1A	1836,-25135,1836
chr19:41594478-41594877	chr19	+	41594499	41594865	True	NM_030589,NM_000766	chr19,chr19	-,+	CYP2A7,CYP2A13	-205842,-182
chr19:41594478-41594877	chr19	-	41356158	41356208	False	NM_000762,NM_053046	chr19,chr19	-,+	CYP2A6,EGLN2	194,-50875
chr10:18560561-18561512	chr10	+	18560606	18561390	True	NM_000724,NM_182543	chr10,chr10	+,-	CACNB2,NSUN6	-11073,379216
chr12:6773101-6773746	chr12	+	6773380	6773680	True	NM_001127586,NM_001164094,NM_001127584,NM_001127585,NM_001127582,NM_001127583,NM_016162	chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,+,-,-,-,-,-	ING4,COPS7A,ING4,ING4,ING4,ING4,ING4	-1072,59469,-1072,-1072,-1072,-1072,-1072
chr7:8471729-8472688	chr7	+	8471741	8472721	True	NM_004968,NM_152745	chr7,chr7	-,+	ICA1,NXPH1	-169556,863
chr17:26216622-26217134	chr17	+	26216658	26217162	True	NM_001076680,NM_016231	chr17,chr17	-,+	C17orf108,NLK	3297,152525
chr6:168420276-168420527	chr6	+	168420391	168420519	True	NM_030615,NM_005355,NM_001129895	chr6,chr6,chr6	+,+,-	KIF25,KIF25,HGC6.3	-1890,-1890,-42772
chr10:62679255-62680243	chr10	+	62679430	62679986	True	NM_033379,NM_014836	chr10,chr10	+,-	CDK1,RHOBTB1	-141269,24098
chr8:98786559-98787142	chr8	+	98786889	98786953	True	NR_002581,NM_018407	chr8,chr8	-,+	SNORA72,LAPTM4B	267542,855
chrX:52686343-52687191	chrX	+	52686438	52686621	True	NR_027250,NM_173358	chrX,chrX	+,-	SSX8,SSX7	-34512,-2488
chr12:80328247-80328453	chr12	+	80328385	80328463	True	NM_001143885,NM_002480,NM_173591	chr12,chr12,chr12	-,-,+	PPP1R12A,PPP1R12A,OTOGL	822,565,274769
chr11:118307947-118308201	chr11	+	118307960	118308202	True	NM_001197104,NM_005933,NM_001040651	chr11,chr11,chr11	+,+,-	MLL,MLL,CD3D	-806,-806,-94501
chr1:109235036-109235321	chr1	+	109235101	109235362	True	NR_037185,NM_018061,NM_144584	chr1,chr1,chr1	+,+,-	PRPF38B,PRPF38B,HENMT1	-217,-220,-30953
chrX:133512290-133512935	chrX	+	133512483	133512779	True	NM_032458,NM_001015877,NM_032335,NR_030587	chrX,chrX,chrX,chrX	+,+,+,-	PHF6,PHF6,PHF6,MIR450B	-5205,-5205,-5205,161575
chr18:3448915-3449325	chr18	+	3449007	3449281	True	NM_019856,NM_173211,NM_173210,NM_173208,NM_170695,NM_003244,NM_173209,NM_173207	chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18	-,+,+,+,+,+,+,+	MYOM1,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1	-228901,4490,2309,749,2309,890,691,-1450
chr11:47925731-47926481	chr11	+	47925866	47926514	True	NM_015231,NM_001098503	chr11,chr11	-,+	NUP160,PTPRJ	-55809,75595
chr15:72689458-72690732	chr15	+	72690371	72690782	True	NM_001080462,NM_000520	chr15,chr15	+,-	TMEM202,HEXA	6,-21851
chrX:70935157-70935444	chrX	+	70935221	70935423	True	NR_034005,NM_001145140,NM_001145139	chrX,chrX,chrX	+,-,-	FLJ46446,CXorf49,CXorf49B	-18226,2762,2762
chrX:70935157-70935444	chrX	-	70985851	70986053	False	NR_001568,NM_001145140,NM_001145139	chrX,chrX,chrX	-,+,+	BCYRN1,CXorf49,CXorf49B	-36889,-2762,-2762
chr1:50605474-50607056	chr1	+	50605585	50606857	True	NM_032785,NM_021952	chr1,chr1	-,+	AGBL4,ELAVL4	-115959,-31043
chr11:117069266-117069682	chr11	+	117069313	117069631	True	NM_003186,NM_001001522,NM_004716	chr11,chr11,chr11	+,+,-	TAGLN,TAGLN,PCSK7	408,408,33230
chr11:124734302-124734733	chr11	+	124734334	124734732	True	NM_022370,NM_019055	chr11,chr11	+,-	ROBO3,ROBO4	572,33149
chr18:77444144-77444956	chr18	+	77444251	77444845	True	NM_001202504,NM_048368,NM_004715,NM_001146343	chr18,chr18,chr18,chr18	+,+,+,-	CTDP1,CTDP1,CTDP1,PQLC1	-2872,-4501,-4501,266858
chr2:24272274-24272478	chr2	+	24272303	24272457	True	NM_025203,NM_004116,NM_054033,NM_001142319	chr2,chr2,chr2,chr2	-,+,+,-	C2orf44,FKBP1B,FKBP1B,C2orf44	-2007,126,126,-2007
chr1:204384956-204386485	chr1	+	204385290	204386500	True	NM_001204171,NM_032833	chr1,chr1	+,-	MDM4,PPP1R15B	99006,-4346
chr17:30350231-30351522	chr17	+	30350664	30350907	True	NM_018428,NM_052888	chr17,chr17	-,+	UTP6,LRRC37B	-121935,-2562
chr1:1340069-1341561	chr1	+	1340173	1341266	True	NM_001039577,NM_017971,NR_015434,NM_030937	chr1,chr1,chr1,chr1	-,-,+,-	CCNL2,MRPL20,LOC148413,CCNL2	-5455,1478,-5314,-5455
chr12:49486564-49487680	chr12	+	49486824	49487602	True	NM_021044,NM_005430	chr12,chr12	-,+	DHH,WNT1	1050,-114646
chr6:24782304-24783652	chr6	+	24782437	24783676	True	NM_030939,NM_015895	chr6,chr6	-,+	C6orf62,GMNN	-63034,-7333
chr16:856077-856584	chr16	+	856080	856309	True	NM_001013638,NM_016541	chr16,chr16	+,-	PRR25,GNG13	-688,-5347
chr9:116613505-116613723	chr9	+	116613504	116613732	True	NM_133374,NM_001633	chr9,chr9	+,-	ZNF618,AMBP	24829,227070
chr12:112121107-112122563	chr12	+	112121207	112122429	True	NM_006768,NM_001136538,NM_025247	chr12,chr12,chr12	-,+,+	BRAP,ACAD10,ACAD10	1411,1427,1427
chr8:143916175-143916389	chr8	+	143916213	143916393	True	NM_002066,NM_000497	chr8,chr8	+,-	GML,CYP11B1	-47,44893
chr15:85198061-85199993	chr15	+	85198086	85199882	True	NR_004859,NM_032856,NM_021077,NM_205858	chr15,chr15,chr15,chr15	+,-,-,-	SCAND2,WDR73,NMB,NMB	-23446,-565,1970,1970
chr16:30124185-30124651	chr16	+	30124185	30124569	True	NR_027081,NM_024307	chr16,chr16	+,-	LOC100271831,GDPD3	863,359
chr3:52801447-52803090	chr3	+	52802003	52802723	True	NM_001166434,NM_003157,NM_002215,NM_001193533	chr3,chr3,chr3,chr3	+,-,+,-	ITIH1,NEK4,ITIH1,NEK4	9799,2292,8884,2292
chr15:76006169-76007055	chr15	+	76006275	76006961	True	NM_175881,NM_001897	chr15,chr15	+,-	ODF3L1,CSPG4	9357,-1086
chr2:91845769-91846163	chr2	+	91846074	91846150	True	NR_003503,NR_027238	chr2,chr2	+,-	GGT8P,LOC654342	117217,1875
chrY:2559621-2559903	chrY	+	2559652	2559951	True	NM_003140,NM_002414,NM_001122898	chrY,chrY,chrY	-,+,+	SRY,CD99,CD99	95891,-475,-475
chrY:2559621-2559903	chrX	+	2609652	2609951	False	NR_037842,NM_002414,NM_001122898	chrX,chrX,chrX	-,+,+	NCRNA00102,CD99,CD99	-76264,-475,-475
chr12:120764493-120765504	chr12	+	120764836	120765503	True	NM_000928,NM_012240	chr12,chr12	-,+	PLA2G1B,SIRT4	139,-24763
chr11:57507151-57508543	chr11	+	57507255	57508542	True	NM_001145101,NM_170746	chr11,chr11	-,+	BTBD18,C11orf31	10761,179
chr1:154927133-154928767	chr1	+	154927300	154928580	True	NM_001826,NM_020524,NM_138300	chr1,chr1,chr1	+,-,-	CKS1B,PBXIP1,PYGO2	18537,37,5728
chr4:103992827-103993306	chr4	+	103993027	103993189	True	NM_001008388,NM_178833	chr4,chr4	+,-	CISD2,NHEDC2	-202953,5041
chr4:165877510-165878083	chr4	+	165877536	165878132	True	NM_153027,NM_001012414	chr4,chr4	+,-	C4orf39,TRIM61	23,20736
chr17:10599684-10600552	chr17	+	10599815	10600450	True	NM_004589,NM_020233	chr17,chr17	-,+	SCO1,C17orf48	485,476
chr17:79602725-79603154	chr17	+	79602737	79602970	True	NM_017921,NM_031945	chr17,chr17	-,+	NPLOC4,TSPAN10	1225,6378
chr10:7454344-7454559	chr10	+	7454353	7454577	True	NM_002216,NM_001018039,NM_001029880	chr10,chr10,chr10	+,-,-	ITIH2,SFMBT2,SFMBT2	290658,-3050,-905
chr17:79267989-79268398	chr17	+	79268124	79268346	True	NM_001037984,NM_138570,NM_001086521	chr17,chr17,chr17	-,-,+	SLC38A10,SLC38A10,C17orf89	800,800,-55064
chr1:115323319-115323746	chr1	+	115323333	115323579	True	NM_003176,NM_025073,NM_001102396	chr1,chr1,chr1	+,-,-	SYCP1,SIKE1,SIKE1	73875,-25,-25
chr12:52912421-52913179	chr12	+	52912430	52913172	True	NM_002284,NM_000424	chr12,chr12	+,-	KRT86,KRT5	-216832,1121
chr5:178328990-178330914	chr5	+	178329261	178330577	True	NM_000843,NM_030613	chr5,chr5	-,+	GRM6,ZFP2	91606,-6407
chr11:64012349-64012630	chr11	+	64012385	64012573	True	NM_057092,NM_138689,NM_001184883,NM_004470,NM_000932,NM_001135208	chr11,chr11,chr11,chr11,chr11,chr11	+,-,+,+,+,+	FKBP2,PPP1R14B,PLCB3,FKBP2,PLCB3,FKBP2	-2848,1890,6421,-4023,6421,-3832
chr3:36784591-36786425	chr3	+	36785227	36786463	True	NM_000249,NM_033403	chr3,chr3	+,-	MLH1,DCLK3	248377,-3875
chr2:73931888-73932523	chr2	+	73931904	73932510	True	NM_016347,NR_003683	chr2,chr2	-,+	NAT8B,ALMS1P	-3437,-59914
chr12:53577662-53578063	chr12	+	53577822	53577894	True	NM_001004304,NM_015989	chr12,chr12	+,-	ZNF740,CSAD	-3347,-3392
chr19:5841631-5842083	chr19	+	5841735	5841863	True	NM_001040701,NM_000150,NM_001097641,NM_001097640,NM_000149,NM_001097639,NM_004558	chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,+	FUT6,FUT6,FUT3,FUT3,FUT3,FUT3,NRTN	-1993,-1993,9672,9672,9672,9672,-17968
chr2:160641025-160641644	chr2	+	160641195	160641449	True	NM_022826,NM_001198763	chr2,chr2	+,-	MARCH7,CD302	-72246,13375
chr12:131720901-131721173	chr12	+	131720949	131721087	True	NR_026670,NM_194356	chr12,chr12	+,-	LOC116437,STX2	-71452,-397138
chr12:22487866-22488097	chr12	+	22487913	22488113	True	NM_018686,NM_003034	chr12,chr12	+,-	CMAS,ST8SIA1	-288805,-265
chr6:164756361-164758120	chr6	+	164756431	164758061	True	NM_206855,NR_037593	chr6,chr6	+,-	QKI,LOC100526820	-920807,-921449
chr1:53019433-53020403	chr1	+	53019704	53020444	True	NM_001009881,NM_015696,NM_015269	chr1,chr1,chr1	-,+,-	ZCCHC11,GPX7,ZCCHC11	-942,47598,-942
chr3:140950775-140951013	chr3	+	140950795	140950955	True	NM_001178140,NM_001037172,NM_152282	chr3,chr3,chr3	-,+,+	TFDP2,ACPL2,ACPL2	768324,-164,-164
chr11:48003152-48003837	chr11	+	48003156	48003828	True	NM_002843,NM_015231,NM_001098503	chr11,chr11,chr11	+,-,+	PTPRJ,NUP160,PTPRJ	-1097,-133099,-1097
chr5:140854190-140855111	chr5	+	140854333	140855131	True	NM_002588,NM_018928,NM_001079812,NM_032406,NM_032402,NM_032403	chr5,chr5,chr5,chr5,chr5,chr5	+,+,-,+,+,+	PCDHGC3,PCDHGC4,DIAPH1,PCDHGC4,PCDHGC3,PCDHGC3	437,9609,143541,9609,437,437
chr17:76357418-76357666	chr17	+	76357497	76357711	True	NM_003955,NM_024419	chr17,chr17	-,+	SOCS3,PGS1	-1339,17023
chr12:70075116-70075715	chr12	+	70075316	70075552	True	NM_022456,NM_152439	chr12,chr12	+,-	RAB3IP,BEST3	57078,7554
chr6:14686554-14687932	chr6	+	14686813	14687574	True	NM_001031713,NM_004973	chr6,chr6	-,+	CCDC90A,JARID2	-872024,558952
chr13:31530324-31531081	chr13	+	31530671	31531099	True	NM_152325,NM_006644	chr13,chr13	+,-	C13orf26,HSPH1	-23888,205068
chr7:148824130-148824438	chr7	+	148824173	148824483	True	NM_001001661,NM_020781	chr7,chr7	-,+	ZNF425,ZNF398	-735,-716
chr10:51370179-51370983	chr10	+	51370234	51371014	True	NR_029388,NM_003631,NM_002443	chr10,chr10,chr10	-,-,+	LOC728407,PARG,MSMB	352,367,178538
chr10:51370179-51370983	chr10	-	51624052	51624520	False	NM_001145262,NM_006327	chr10,chr10	+,-	NCOA4,TIMM23	-47818,-716
chr2:138737494-138737900	chr2	+	138737506	138737951	True	NM_007226,NM_006895	chr2,chr2	-,+	NXPH2,HNMT	799913,-15749
chr11:60870119-60870667	chr11	+	60870137	60870619	True	NM_017966,NM_014207	chr11,chr11	-,+	VPS37C,CD5	58347,-258
chr11:64793553-64794739	chr11	+	64793601	64794759	True	NM_013306,NM_147777,NM_138456	chr11,chr11,chr11	+,+,-	SNX15,SNX15,BATF2	120,120,-29084
chr14:75536614-75537515	chr14	+	75536622	75537490	True	NM_001042430,NM_203488,NM_001107,NM_024643	chr14,chr14,chr14,chr14	+,-,-,+	FAM164C,ACYP1,ACYP1,FAM164C	-374,-5886,-5886,-374
chr11:102215856-102216817	chr11	+	102216019	102216761	True	NM_001166,NM_052932	chr11,chr11	+,-	BIRC2,TMEM123	1204,107065
chr11:66205267-66206011	chr11	+	66205602	66205990	True	NM_170739,NM_170738,NM_178864,NM_016050	chr11,chr11,chr11,chr11	-,-,+,-	MRPL11,MRPL11,NPAS4,MRPL11	370,370,-17178,370
chr16:617895-618274	chr16	+	617942	618272	True	NM_176677,NM_148920,NM_145270,NR_024121,NM_004204	chr16,chr16,chr16,chr16,chr16	+,+,+,-,+	NHLRC4,PIGQ,C16orf11,NCRNA00235,PIGQ	-961,1731,-7571,-40535,1731
chr12:108910941-108911694	chr12	+	108911051	108911708	True	NM_007076,NM_014706	chr12,chr12	+,-	FICD,SART3	-2051,43508
chr16:2849587-2849997	chr16	+	2849701	2850042	True	NM_152891,NM_001135086	chr16,chr16	-,+	PRSS33,PRSS41	-12993,-1266
chr17:45930270-45930515	chr17	+	45930308	45930515	True	NM_199262,NM_033413	chr17,chr17	-,+	SP6,LRRC46	2776,-21374
chr10:89119262-89119552	chr10	+	89119283	89119465	True	NM_001009610,NR_024397	chr10,chr10	+,-	FAM22D,LOC728190	-1857,-16968
chr10:89119262-89119552	chr10	+	81464974	81465024	False	NR_027512,NM_001098668	chr10,chr10	+,-	LOC650623,SFTPA2	-22294,-144811
chr10:89119262-89119552	chr10	+	88987064	88987246	False	NM_001099338,NR_024397	chr10,chr10	+,-	FAM22A,LOC728190	-1910,115119
chr10:6620024-6621073	chr10	+	6620199	6621047	True	NR_036502,NR_036503,NM_006257	chr10,chr10,chr10	+,+,-	LOC439949,LOC439949,PRKCQ	1339,1339,1241
chr2:128403801-128404043	chr2	+	128403909	128404017	True	NM_005291,NR_027823,NM_001161416,NM_001161417,NM_001161415	chr2,chr2,chr2,chr2,chr2	+,-,+,+,+	GPR17,LIMS2,GPR17,GPR17,GPR17	-521,1786,-521,-521,-521
chr8:23538000-23538817	chr8	+	23538013	23538811	True	NM_006167,NM_016612	chr8,chr8	-,+	NKX3-1,SLC25A37	1689,-151714
chr8:38126818-38127021	chr8	+	38126849	38127001	True	NM_001164232,NM_001102560,NM_001102559,NM_032483	chr8,chr8,chr8,chr8	+,-,-,-	DDHD2,PPAPDC1B,PPAPDC1B,PPAPDC1B	-37429,-111,-111,-111
chr15:72488115-72488984	chr15	+	72488297	72488999	True	NM_001012642,NM_145204	chr15,chr15	-,+	GRAMD2,SENP8	1187,-77717
chr12:6231651-6232241	chr12	+	6231739	6232179	True	NM_001769,NM_000552	chr12,chr12	+,-	CD9,VWF	77302,1707
chr8:11973797-11974127	chr8	+	11973862	11974168	True	NR_003275,NR_027425	chr8,chr8	-,+	LOC392196,FAM66D	12686,-622
chr8:11973797-11974127	chr8	+	12220340	12220390	False	NR_024044,NR_026789	chr8,chr8	-,+	DEFB109P1,FAM66A	37534,-863
chr8:11973797-11974127	chr8	-	7211998	7212072	False	NR_027423,NM_001164457,NR_003668	chr8,chr8,chr8	-,-,+	FAM66B,ZNF705G,DEFB109P1B	854,8468,-41681
chr8:11973797-11974127	chr8	+	7813340	7813414	False	NR_003668,NR_027424	chr8,chr8	-,+	DEFB109P1B,FAM66E	41679,-856
chr3:10072013-10072303	chr3	+	10072115	10072307	True	NR_002786,NM_033084,NM_001018115	chr3,chr3,chr3	-,+,+	CIDECP,FANCD2,FANCD2	-4295,-4060,-4060
chr18:67109234-67110621	chr18	+	67109255	67110519	True	NM_152721,NM_006566	chr18,chr18	+,-	DOK6,CD226	-41031,513777
chr11:77531717-77531926	chr11	+	77531802	77531960	True	NM_016578,NM_024684	chr11,chr11	-,+	RSF1,C11orf67	-6,247
chr5:150085388-150086684	chr5	+	150085432	150086674	True	NM_018047,NM_133371	chr5,chr5	-,+	RBM22,MYOZ3	-4763,-45079
chr16:68572108-68572345	chr16	+	68572146	68572352	True	NM_133458,NM_018667	chr16,chr16	+,-	ZFP90,SMPD3	1308,-89737
chr17:67245160-67246911	chr17	+	67245424	67246953	True	NM_080282,NM_002758	chr17,chr17	-,+	ABCA10,MAP2K6	-4468,163884
chr6:15061920-15062546	chr6	+	15062404	15062582	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	183944,600757
chr21:35824465-35826355	chr21	+	35824722	35825848	True	NM_001127670,NM_001127669,NM_001127668,NM_058182	chr21,chr21,chr21,chr21	-,-,-,+	KCNE1,KCNE1,KCNE1,FAM165B	2272,6111,6111,-77025
chr19:54373564-54374407	chr19	+	54373771	54374134	True	NM_138373,NM_144687,NM_001020821,NM_001020820,NM_001020818,NM_001020819	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+	MYADM,NLRP12,MYADM,MYADM,MYADM,MYADM	-2685,-46123,-1162,-4211,-1041,-2685
chr8:22102185-22102388	chr8	+	22102189	22102433	True	NM_001722,NR_029714	chr8,chr8	+,-	POLR3D,MIR320A	185,173
chr17:45452955-45454618	chr17	+	45453008	45454381	True	NR_027416,NR_033934	chr17,chr17	+,-	LOC100272146,MRPL45P2	46461,115664
chr17:38122136-38122717	chr17	+	38122231	38122645	True	NM_178171,NM_139280	chr17,chr17	+,-	GSDMA,ORMDL3	-3056,-38347
chr1:39339293-39339692	chr1	+	39339308	39339726	True	NR_037633,NR_037632,NR_037637,NR_037636,NR_037635,NR_037634,NM_012333,NM_030772,NM_001136275	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,-,-,-,+	GJA9-MYCBP,MYCBP,GJA9-MYCBP,GJA9-MYCBP,GJA9-MYCBP,GJA9-MYCBP,MYCBP,GJA9,AKIRIN1	7622,-258,7622,7622,7622,7622,-258,7622,117189
chr5:79715108-79715721	chr5	+	79715223	79715618	True	NR_003665,NM_014733	chr5,chr5	-,+	CRSP8P,ZFYVE16	-67438,-11443
chr7:140373909-140374762	chr7	+	140373913	140374705	True	NR_024454,NM_052853	chr7,chr7	-,+	LOC100134713,ADCK2	22232,-1011
chr22:24097225-24098601	chr22	+	24097409	24098193	True	NM_013378,NM_021916,NM_182520	chr22,chr22,chr22	-,-,+	VPREB3,ZNF70,C22orf15	-779,-4130,7014
chr17:56608734-56609160	chr17	+	56608851	56609175	True	NM_001198713,NM_002876,NM_004574,NM_080415,NM_080416,NR_037156,NR_037155	chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,-,-,-,-,-	SEPT4,RAD51C,SEPT4,SEPT4,SEPT4,SEPT4,SEPT4	9054,160787,-2073,318,318,-3477,-2073
chr15:75933386-75934103	chr15	+	75933386	75933895	True	NM_153271,NM_018285	chr15,chr15	+,-	SNX33,IMP3	7452,-722
chr2:86946797-86947022	chr2	+	86946843	86946985	True	NM_022780,NM_001198954	chr2,chr2	+,-	RMND5A,RNF103-VPS24	428,1310
chr2:86946797-86947022	chr2	-	87303988	87304038	False	NR_026846,NM_001024457	chr2,chr2	-,+	LOC285074,RGPD1	-452,-159301
chr6:45388078-45388507	chr6	+	45388207	45388537	True	NM_004348,NM_181356	chr6,chr6	+,-	RUNX2,SUPT3H	1376,-42537
chr3:179704483-179706043	chr3	+	179704763	179705833	True	NM_003940,NM_016559	chr3,chr3	+,-	USP13,PEX5L	-333881,48741
chr19:51357069-51358193	chr19	+	51357350	51358006	True	NM_138564,NM_001030047,NM_001030048,NM_001648,NM_001030050	chr19,chr19,chr19,chr19,chr19	-,+,+,+,+	KLK15,KLK3,KLK3,KLK3,KLK3	-22571,164,164,164,164
chr19:54370813-54371057	chr19	+	54370852	54370938	True	NM_138373,NM_144687,NM_001020821,NM_001020820,NM_001020818,NM_001020819	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+	MYADM,NLRP12,MYADM,MYADM,MYADM,MYADM	198,-43204,1721,-1292,1842,198
chr5:6585444-6586028	chr5	+	6585443	6586003	True	NR_024424,NR_024423,NM_001193455	chr5,chr5,chr5	+,+,-	LOC255167,LOC255167,NSUN2	-2084,-3207,47520
chr4:21286492-21287171	chr4	+	21286526	21287124	True	NM_145048,NM_147183	chr4,chr4	+,-	PACRGL,KCNIP4	-584541,18455
chrY:6738927-6739143	chrY	+	6738942	6739178	True	NM_001143,NM_033284	chrY,chrY	-,+	AMELY,TBL1Y	2940,39548
chr5:132387348-132387627	chr5	+	132387362	132387672	True	NM_017665,NM_002154	chr5,chr5	-,+	ZCCHC10,HSPA4	-25122,-3
chr6:8101381-8102523	chr6	+	8101692	8102378	True	NM_001135650,NR_027712,NR_037618,NM_004280	chr6,chr6,chr6,chr6	-,+,-,-	EEF1E1,PIP5K1P1,EEF1E1-MUTED,EEF1E1	500,-115408,500,500
chr1:38325951-38326537	chr1	+	38325963	38326487	True	NM_198446,NM_005955	chr1,chr1	+,-	C1orf122,MTF1	-52541,-671
chr13:28563649-28564053	chr13	+	28563712	28564078	True	NM_001105577,NR_002162	chr13,chr13	-,+	PRHOXNB,ATP5EP2	-938,-44422
chr10:116582431-116583344	chr10	+	116582454	116583126	True	NM_001135051,NM_020940,NM_001003408	chr10,chr10,chr10	+,+,-	FAM160B1,FAM160B1,ABLIM1	-1002,-1002,-138040
chr20:1248043-1248977	chr20	+	1248120	1249012	True	NM_014723,NM_015685	chr20,chr20	+,-	SNPH,SDCBP2	-1211,45355
chr19:49433807-49434355	chr19	+	49434085	49434175	True	NM_003323,NM_014475	chr19,chr19	-,+	TULP2,DHDH	-32089,2763
chr6:4136475-4137306	chr6	+	4136570	4137086	True	NM_006117,NR_028588,NM_001085401,NM_206836,NM_001166010	chr6,chr6,chr6,chr6,chr6	-,-,+,-,-	ECI2,ECI2,C6orf201,ECI2,ECI2	-739,-739,-57185,-739,-868
chr8:7308407-7308704	chr8	+	7308486	7308712	True	NM_058206,NM_058207,NM_001040703	chr8,chr8,chr8	-,-,+	SPAG11B,SPAG11B,DEFB105B	1225,1225,36530
chr17:34257208-34257460	chr17	+	34257279	34257481	True	NM_001163124,NM_001163125,NM_001034836,NM_001163120,NM_001163121,NM_001163122,NM_001163130,NM_020426,NM_145654,NM_003487,NR_027999,NR_027998,NR_027997,NR_027996,NR_028000	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,-,-,-,-,+,-,-,-,-,-	RDM1,RDM1,RDM1,RDM1,RDM1,RDM1,RDM1,LYZL6,RDM1,TAF15,RDM1,RDM1,RDM1,RDM1,RDM1	24,24,349,349,349,24,24,9129,349,-120843,24,349,349,349,24
chr17:65242890-65243938	chr17	+	65242893	65243653	True	NM_014877,NM_012417	chr17,chr17	-,+	HELZ,PITPNC1	-1574,130270
chr4:65212136-65213787	chr4	+	65212515	65213659	True	NR_034138,NM_001010874	chr4,chr4	+,-	LOC100144602,TECRL	1322019,61569
chr2:88355474-88356138	chr2	+	88355658	88355996	True	NM_016618,NM_198274	chr2,chr2	-,+	KRCC1,SMYD1	-410,11302
chr2:97203185-97203418	chr2	+	97203377	97203443	True	NM_212481,NR_026875	chr2,chr2	+,-	ARID5A,NEURL3	-964,-29531
chr1:222721742-222722900	chr1	+	222721827	222722867	True	NM_024746,NM_198551	chr1,chr1	-,+	HHIPL2,MIA3	-383,68576
chr2:172381741-172382329	chr2	+	172381773	172382331	True	NM_024843,NM_001127383,NM_024770	chr2,chr2,chr2	+,+,-	CYBRD1,CYBRD1,METTL8	-2961,-2961,-90461
chr5:95004997-95005784	chr5	+	95005168	95005798	True	NM_031952,NM_173362	chr5,chr5	-,+	SPATA9,RFESD	12966,-22636
chr14:50050740-50051336	chr14	+	50051009	50051221	True	NM_001030001,NR_037792,NM_001032	chr14,chr14,chr14	-,+,-	RPS29,LRR1,RPS29	1923,14193,1923
chr1:119936562-119937897	chr1	+	119936789	119937742	True	NR_036540,NM_001166120	chr1,chr1	-,+	LOC644242,HSD3B2	204223,19811
chr11:122851117-122851448	chr11	+	122851131	122851431	True	NR_027288,NM_001098169	chr11,chr11	+,-	LOC341056,BSX	36842,998
chr20:47834920-47835408	chr20	+	47835181	47835243	True	NM_017454,NM_017895	chr20,chr20	-,+	STAU1,DDX27	-30277,588
chr19:50314330-50315084	chr19	+	50314507	50314983	True	NM_025129,NR_033269,NM_001171937,NM_030973	chr19,chr19,chr19,chr19	-,-,-,+	FUZ,FUZ,FUZ,MED25	1634,1634,1634,6552
chr14:23479085-23479372	chr14	+	23479085	23479361	True	NM_001130706,NM_021944,NM_001130708,NM_001099780	chr14,chr14,chr14,chr14	-,-,-,+	C14orf93,C14orf93,C14orf93,PSMB11	49,49,49,32014
chr14:105647554-105647803	chr14	+	105647601	105647807	True	NM_177533,NM_033271	chr14,chr14	-,+	NUDT14,BTBD6	47,67071
chr10:104951061-104952188	chr10	+	104951287	104951983	True	NM_012229,NM_001134373,NM_001143909	chr10,chr10,chr10	-,-,+	NT5C2,NT5C2,LOC729020	1123,1123,53660
chr17:27184284-27184664	chr17	+	27184418	27184526	True	NR_029685,NR_029970,NM_005702	chr17,chr17,chr17	-,-,+	MIR144,MIR451,ERAL1	4160,3982,-2438
chr17:75182274-75183753	chr17	+	75182645	75183803	True	NM_001144001,NR_036200	chr17,chr17	+,-	SEC14L1,MIR4316	-1403,209385
chr2:196531273-196532466	chr2	+	196531610	196532498	True	NM_020342,NM_018897	chr2,chr2	+,-	SLC39A10,DNAH7	-9809,401088
chr7:35294183-35294520	chr7	+	35294223	35294539	True	NM_001166220,NM_001077653,NM_001011553	chr7,chr7,chr7	-,-,+	TBX20,TBX20,SEPT7	-512,-512,546087
chrX:54980389-54981411	chrX	+	54980432	54981352	True	NM_002625,NM_177556	chrX,chrX	-,+	PFKFB1,TRO	39209,-33236
chr2:27341305-27341684	chr2	+	27341306	27341696	True	NM_032604,NM_001166239,NM_006569,NM_001166240,NM_001166241	chr2,chr2,chr2,chr2,chr2	+,-,-,-,-	ABHD1,CGREF1,CGREF1,CGREF1,CGREF1	4960,127,349,349,-7336
chr19:8677529-8678390	chr19	+	8677740	8678076	True	NM_030957,NM_001004699	chr19,chr19	-,+	ADAMTS10,OR2Z1	-2152,163314
chr7:74071849-74072078	chr7	+	74071905	74071983	True	NM_173537,NM_001518,NM_033001,NM_033000,NM_001163636,NM_032999	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,+,+	GTF2IRD2,GTF2I,GTF2I,GTF2I,GTF2I,GTF2I	195908,46,46,46,46,46
chr10:134150863-134151151	chr10	+	134151054	134151188	True	NR_026559,NM_030626,NM_173575,NM_001143757,NM_001143759,NM_001143758	chr10,chr10,chr10,chr10,chr10,chr10	+,+,-,+,+,+	LRRC27,LRRC27,STK32C,LRRC27,LRRC27,LRRC27	-494,-5491,-29577,-5364,-5491,-5491
chr18:30050673-30050958	chr18	+	30050804	30050884	True	NR_003558,NM_022751	chr18,chr18	+,-	WBP11P1,FAM59A	40741,-357
chr11:94929950-94930699	chr11	+	94930040	94930585	True	NM_144665,NM_015036	chr11,chr11	-,+	SESN3,ENDOD1	33711,-107117
chr15:79609563-79611106	chr15	+	79609568	79611024	True	NM_002891,NM_007364	chr15,chr15	-,+	RASGRF1,TMED3	-226353,-6128
chr6:14879609-14880311	chr6	+	14879888	14880342	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	366184,782997
chr2:179725182-179726082	chr2	+	179725383	179725884	True	NM_019091,NM_133379	chr2,chr2	+,-	PLEKHA3,TTN	-380242,-53233
chr1:161600920-161601719	chr1	+	161600920	161601707	True	NR_024151,NM_000570	chr1,chr1	+,-	HSPA7,FCGR3B	-25122,34
chr1:161600920-161601719	chr1	+	161520302	161520352	False	NM_000569,NM_001127593,NM_001127592,NM_001127595,NM_001127596,NM_002155	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,+	FCGR3A,FCGR3A,FCGR3A,FCGR3A,FCGR3A,HSPA6	-484,111,-484,111,111,-26317
chr20:44747225-44747796	chr20	+	44747261	44747838	True	NM_152854,NM_001250,NM_020967	chr20,chr20,chr20	+,+,-	CD40,CD40,NCOA5	-406,-406,-28681
chr19:10418485-10418849	chr19	+	10418493	10418763	True	NM_001031734,NM_001103167,NM_003259	chr19,chr19,chr19	-,-,+	FDX1L,ZGLP1,ICAM5	7978,1520,-17896
chrX:43814080-43815017	chrX	+	43814406	43814970	True	NM_000266,NM_000240	chrX,chrX	-,+	NDP,MAOA	18001,-299060
chr19:10981088-10981344	chr19	+	10981184	10981272	True	NM_199141,NM_006858	chr19,chr19	+,-	CARM1,TMED1	980,-34201
chr8:126104297-126104558	chr8	+	126104302	126104600	True	NM_014846,NM_173685	chr8,chr8	-,+	KIAA0196,NSMCE2	-241,-270
chr19:55678889-55679525	chr19	+	55679099	55679445	True	NM_178837,NM_000363,NM_017729	chr19,chr19,chr19	-,-,+	C19orf51,TNNI3,EPS8L1	-1081,-9999,-87390
chr15:71145495-71145994	chr15	+	71145500	71145830	True	NM_018357,NM_001199017,NM_197958	chr15,chr15,chr15	-,+,-	LARP6,LRRC49,LARP6	718,39097,718
chr16:28251854-28252246	chr16	+	28251941	28252059	True	NM_015171,NM_001024401	chr16,chr16	-,+	XPO6,SBK1	-28751,51780
chr2:196862031-196863746	chr2	+	196862344	196863761	True	NM_020342,NM_018897	chr2,chr2	+,-	SLC39A10,DNAH7	-340544,69825
chr11:6891725-6892335	chr11	+	6891753	6892178	True	NM_003700,NM_001004460,NM_207186	chr11,chr11,chr11	-,+,+	OR2D2,OR10A2,OR10A4	21612,-818,5677
chr7:34739775-34741637	chr7	+	34739782	34741674	True	NR_033664,NM_207173	chr7,chr7	-,+	AAA1,NPSR1	56260,-41936
chr3:52479106-52479628	chr3	+	52479110	52479668	True	NM_003280,NM_020163,NM_007184	chr3,chr3,chr3	-,-,+	TNNC1,SEMA3G,NISCH	8439,-67,9855
chr7:8302202-8302829	chr7	+	8302210	8302854	True	NM_004968,NM_152745,NM_022307,NM_001136020	chr7,chr7,chr7,chr7	-,+,-,-	ICA1,NXPH1,ICA1,ICA1	-25,170730,-528,-430
chr10:64890163-64891637	chr10	+	64890311	64891683	True	NM_004241,NM_030759	chr10,chr10	-,+	JMJD1C,NRBF2	137356,1323
chr8:17400996-17401672	chr8	+	17401144	17401724	True	NM_001164771,NM_003046,NM_004686	chr8,chr8,chr8	+,+,-	SLC7A2,SLC7A2,MTMR7	-4909,-4909,-130104
chr7:72569842-72570350	chr7	+	72569871	72570347	True	NR_002206,NR_003664,NR_003580	chr7,chr7,chr7	+,-,+	GTF2IP1,SPDYE8P,LOC100093631	-896,-69562,-910
chr7:72569842-72570350	chr7	-	99868630	99869018	False	NR_028040,NM_001004351,NR_028039,NR_028038,NM_178831	chr7,chr7,chr7,chr7,chr7	-,+,-,-,-	GATS,SPDYE3,GATS,GATS,GATS	887,36306,887,887,887
chr7:72569842-72570350	chr7	+	74379636	74380105	False	NM_001025202,NM_001145063	chr7,chr7	-,+	STAG3L2,GATSL1	-72905,-604
chr7:72569842-72570350	chr7	-	74866467	74866788	False	NM_001145064,NR_003664	chr7,chr7	-,+	GATSL2,SPDYE8P	603,69744
chr7:72569842-72570350	chr7	-	74652127	74652599	False	NR_002206,NM_001003795,NR_003580	chr7,chr7,chr7	-,+,-	GTF2IP1,GTF2IRD2B,LOC100093631	896,-143831,910
chr3:179065949-179067588	chr3	+	179066028	179067298	True	NM_033540,NM_171828	chr3,chr3	+,-	MFN1,KCNMB3	-599,-81190
chr16:83840403-83841006	chr16	+	83840434	83840986	True	NM_001080442,NM_001537	chr16,chr16	-,+	SLC38A8,HSBP1	234826,606
chr12:102131699-102132060	chr12	+	102131740	102131857	True	NM_153694,NM_001177949,NM_001177948,NM_020244	chr12,chr12,chr12,chr12	-,-,-,+	SYCP3,SYCP3,SYCP3,CHPT1	1450,1450,1450,-40379
chr9:96212836-96213427	chr9	+	96213045	96213359	True	NM_198841,NM_014612	chr9,chr9	-,+	FAM120AOS,FAM120A	2565,813
chr4:89698047-89698346	chr4	+	89698160	89698389	True	NM_001015045,NR_002806	chr4,chr4	-,+	FAM13A,FAM13AOS	46070,-67285
chr8:144625856-144626830	chr8	+	144625967	144626827	True	NM_001166237,NM_015117	chr8,chr8	+,-	GSDMD,ZC3H3	8729,-2347
chr4:39372632-39374560	chr4	+	39372632	39374619	True	NM_002913,NM_001204747,NM_175737	chr4,chr4,chr4	-,-,+	RFC1,RFC1,KLB	-4631,-4631,33853
chr11:120898631-120900463	chr11	+	120899370	120900306	True	NM_001130047,NM_012101,NM_152715	chr11,chr11,chr11	+,-,+	TBCEL,TRIM29,TBCEL	-4619,-890507,-4609
chr8:61192644-61193335	chr8	+	61192815	61193290	True	NM_004056,NM_002865	chr8,chr8	-,+	CA8,RAB2A	715,236268
chr4:111448441-111449818	chr4	+	111448504	111449838	True	NM_000325,NM_001977	chr4,chr4	-,+	PITX2,ENPEP	94466,-51328
chr10:75500907-75501539	chr10	+	75501215	75501587	True	NM_198597,NR_026592,NM_004922	chr10,chr10,chr10	+,-,+	SEC24C,BMS1P4,SEC24C	2543,-10943,2543
chr17:74238131-74239074	chr17	+	74238299	74238978	True	NM_052916,NM_182565	chr17,chr17	-,+	RNF157,FAM100B	-1909,22307
chr1:13360328-13361807	chr1	+	13360730	13361735	True	NM_001013692,NM_001010889,NM_001013407,NM_001012276	chr1,chr1,chr1,chr1	-,+,+,-	PRAMEF3,PRAMEF6,PRAMEF5,PRAMEF8	-29038,-952,-966,29080
chr1:13360328-13361807	chr1	-	13005503	13006508	False	NM_001012277,NM_001010889	chr1,chr1	+,-	PRAMEF7,PRAMEF6	-28041,952
chr1:13360328-13361807	chr1	-	13115835	13116839	False	NM_001100631,NM_001013407	chr1,chr1	+,-	PRAMEF22,PRAMEF5	-80343,966
chr8:30238733-30239360	chr8	+	30238926	30239232	True	NM_001100916,NM_006867,NM_001008712,NM_001008711,NM_001008710	chr8,chr8,chr8,chr8,chr8	-,+,+,+,+	MBOAT4,RBPMS,RBPMS,RBPMS,RBPMS	-236726,2711,2711,2711,2711
chr1:38159364-38159666	chr1	+	38159425	38159533	True	NM_017850,NM_018101	chr1,chr1	-,+	C1orf109,CDCA8	-3233,-1323
chr5:150159535-150159985	chr5	+	150159583	150159957	True	NM_032947,NM_016221	chr5,chr5	+,-	C5orf62,DCTN4	-2126,-20926
chr12:16036970-16038213	chr12	+	16037140	16038114	True	NM_004447,NM_007178	chr12,chr12	-,+	EPS8,STRAP	-94630,-1903
chr20:62667135-62667790	chr20	+	62667301	62667827	True	NR_027687,NR_027686,NM_018419	chr20,chr20,chr20	+,+,-	NCRNA00176,NCRNA00176,SOX18	-1655,-1655,13202
chr2:45169598-45169801	chr2	+	45169616	45169844	True	NM_005413,NM_016932	chr2,chr2	+,-	SIX3,SIX2	-630,66748
chr3:14216521-14217791	chr3	+	14216559	14217705	True	NM_004628,NM_014463,NR_027299,NM_001145769	chr3,chr3,chr3,chr3	-,+,-,-	XPC,LSM3,XPC,XPC	2517,2522,2517,2517
chr7:73133464-73133689	chr7	+	73133483	73133733	True	NM_004603,NR_036247,NM_001165903	chr7,chr7,chr7	-,+,-	STX1A,MIR4284,STX1A	334,-7887,334
chr2:86098251-86099755	chr2	+	86098635	86099479	True	NM_032827,NM_001042437	chr2,chr2	+,-	ATOH8,ST3GAL5	-117794,-3842
chr17:37891782-37893003	chr17	+	37892071	37893035	True	NM_032339,NM_001030002,NM_005310	chr17,chr17,chr17	-,+,+	C17orf37,GRB7,GRB7	-5283,1554,1151
chr7:8273572-8274515	chr7	+	8274088	8274520	True	NM_152745,NM_022307	chr7,chr7	+,-	NXPH1,ICA1	199064,27212
chr7:138484241-138485603	chr7	+	138484305	138485244	True	NM_020632,NM_130840,NM_001085429	chr7,chr7,chr7	-,-,+	ATP6V0A4,ATP6V0A4,TMEM213	-1364,-1364,-1617
chr1:198665998-198666628	chr1	+	198666000	198666643	True	NM_080921,NM_133326	chr1,chr1	+,-	PTPRC,ATP6V1G3	-57921,-155925
chr20:17542066-17542858	chr20	+	17542296	17542554	True	NM_001011546,NM_001161705,NM_006870	chr20,chr20,chr20	+,-,+	DSTN,BFSP1,DSTN	8044,-2691,8044
chr18:40673755-40675273	chr18	+	40673754	40674713	True	NM_002647,NM_002930	chr18,chr18	+,-	PIK3C3,RIT2	-1138606,20999
chr16:86376017-86376846	chr16	+	86376050	86376840	True	NR_024406,NM_001451	chr16,chr16	-,+	LOC732275,FOXF1	2495,167292
chr17:37358666-37359314	chr17	+	37358677	37359214	True	NM_199248,NM_000981,NM_000723,NM_199247	chr17,chr17,chr17,chr17	-,+,-,-	CACNB1,RPL19,CACNB1,CACNB1	-4776,-2192,-4776,-4776
chr5:134872637-134873045	chr5	+	134872639	134872985	True	NM_145282,NM_006161	chr5,chr5	+,-	SLC25A48,NEUROG1	297379,-1000
chr17:7234213-7234619	chr17	+	7234356	7234550	True	NM_001005408,NM_032442,NM_014716	chr17,chr17,chr17	-,-,+	NEURL4,NEURL4,ACAP1	-1718,-1718,5297
chr4:164253468-164253796	chr4	+	164253583	164253809	True	NM_006174,NM_000909	chr4,chr4	+,-	NPY5R,NPY1R	11281,188
chr20:23587048-23587394	chr20	+	23587259	23587441	True	NM_001008693,NR_001279	chr20,chr20	-,+	CST9,CSTT	-649,-87527
chr9:115126296-115127959	chr9	+	115127002	115127294	True	NR_036085,NM_001195822	chr9,chr9	-,+	MIR3134,HSDL2	-14457,14894
chr1:57372008-57372210	chr1	+	57372031	57372245	True	NM_000562,NM_000066	chr1,chr1	+,-	C8A,C8B	-51646,59493
chr3:135972022-135973877	chr3	+	135972811	135973723	True	NM_001178014,NM_000532,NM_018133	chr3,chr3,chr3	+,+,-	PCCB,PCCB,MSL2	-3700,-3700,-58123
chr3:37036730-37037017	chr3	+	37036730	37036871	True	NM_001167617,NM_014805,NM_000249,NM_001167618,NM_001167619	chr3,chr3,chr3,chr3,chr3	+,-,+,+,+	MLH1,EPM2AIP1,MLH1,MLH1,MLH1	-1519,-1935,-1946,-1519,-1519
chrX:102840822-102841279	chrX	+	102840873	102841189	True	NM_001006935,NM_001006937,NM_080879,NM_024863	chrX,chrX,chrX,chrX	+,+,-,+	TCEAL4,TCEAL4,RAB40A,TCEAL4	-505,-505,-66456,-505
chr2:113342207-113342497	chr2	+	113342271	113342543	True	NM_032309,NR_033871	chr2,chr2	+,-	CHCHD5,FLJ42351	-286,59264
chr12:57505157-57505603	chr12	+	57505361	57505651	True	NM_002332,NM_003153,NR_033659,NM_001178078,NM_001178080,NM_001178081,NM_001178079	chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,-,-,-,-,-,-	LRP1,STAT6,STAT6,STAT6,STAT6,STAT6,STAT6	16630,-165,-165,-165,-165,-165,-1272
chr20:31275457-31277376	chr20	+	31276004	31276350	True	NM_006892,NM_182584	chr20,chr20	+,-	DNMT3B,C20orf203	73840,-36221
chr1:2984187-2984413	chr1	+	2984209	2984445	True	NM_022114,NR_024371,NR_015440,NM_199454	chr1,chr1,chr1,chr1	+,-,-,+	PRDM16,FLJ42875,FLJ42875,PRDM16	1296,34,34,1296
chr16:83983708-83984190	chr16	+	83983824	83983908	True	NM_013370,NM_001080442,NM_182981,NM_182980	chr16,chr16,chr16,chr16	+,-,+,+	OSGIN1,SLC38A8,OSGIN1,OSGIN1	-1203,91904,2918,-1203
chr16:67904056-67905612	chr16	+	67904161	67905637	True	NM_014329,NM_025082	chr16,chr16	+,-	EDC4,CENPT	1361,-22800
chr1:95395551-95397350	chr1	+	95395648	95396933	True	NM_001839,NR_033998	chr1,chr1	-,+	CNN3,LOC729970	-2913,-2115
chr4:163045673-163045942	chr4	+	163045672	163045851	True	NM_006174,NM_001128427	chr4,chr4	+,-	NPY5R,FSTL5	1219239,39392
chr11:64887614-64888212	chr11	+	64887622	64888254	True	NM_001997,NR_037568,NR_037567,NM_014205,NM_003273,NM_004927	chr11,chr11,chr11,chr11,chr11,chr11	-,+,+,-,+,+	FAU,MRPL49,MRPL49,ZNHIT2,TM7SF2,MRPL49	1468,1461,1400,-2452,-8332,1461
chr16:682651-682911	chr16	+	682706	682850	True	NM_001040165,NM_001040160,NM_032366,NM_001040162,NM_053284,NM_138418,NM_001040161	chr16,chr16,chr16,chr16,chr16,chr16,chr16	-,-,-,-,+,+,-	C16orf13,C16orf13,C16orf13,C16orf13,WFIKKN1,FAM195A,C16orf13	3547,3547,3547,3547,-1745,8998,3547
chr12:2920398-2921012	chr12	+	2920756	2920988	True	NM_018463,NM_031474	chr12,chr12	+,-	ITFG2,NRIP2	798,23283
chr15:71089078-71091025	chr15	+	71089377	71090997	True	NM_018003,NM_001199017	chr15,chr15	-,+	UACA,LRRC49	-33527,93930
chr14:50160227-50160562	chr14	+	50160255	50160440	True	NM_172193,NM_001197330,NM_001197331,NM_002692	chr14,chr14,chr14,chr14	+,-,-,-	KLHDC1,POLE2,POLE2,POLE2	-483,-5157,-5157,-5157
chr20:31754752-31755108	chr20	+	31754767	31755157	True	NM_080574,NM_080675	chr20,chr20	+,-	C20orf70,SUN5	802,-162528
chr5:179163682-179164956	chr5	+	179164125	179164743	True	NM_014757,NM_001164444	chr5,chr5	+,-	MAML1,CBY3	-4341,-56150
chr17:35292738-35293125	chr17	+	35292875	35293107	True	NM_198837,NM_005568	chr17,chr17	-,+	ACACA,LHX1	363635,1664
chr3:185085130-185085799	chr3	+	185085130	185085731	True	NM_001966,NM_004721	chr3,chr3	-,+	EHHADH,MAP3K13	-113244,-4211
chr4:153702215-153702682	chr4	+	153702221	153702380	True	NM_001025595,NM_014447,NM_145720,NM_001025593	chr4,chr4,chr4,chr4	+,+,-,+	ARFIP1,ARFIP1,TIGD4,ARFIP1	-1167,-1167,-1305,-1167
chrY:21907081-21908054	chrY	+	21907102	21908099	True	NM_032576,NM_001146705,NM_004653,NM_001146706	chrY,chrY,chrY,chrY	+,-,-,-	CYorf15B,KDM5D,KDM5D,KDM5D	-148719,-277,-277,-277
chr2:44295077-44296948	chr2	+	44295561	44296880	True	NM_133259,NM_001033556	chr2,chr2	-,+	LRPPRC,PPM1B	-72417,99119
chr5:150284528-150284794	chr5	+	150284537	150284739	True	NM_001145805,NM_052860,NM_001172831,NM_001172832	chr5,chr5,chr5,chr5	+,-,-,-	IRGM,ZNF300,ZNF300,ZNF300	-58503,8,8,8
chr5:137801852-137802125	chr5	+	137801930	137802142	True	NM_004730,NM_001964	chr5,chr5	-,+	ETF1,EGR1	76840,-800
chr1:150954782-150955030	chr1	+	150954790	150955030	True	NM_003568,NM_022075,NM_181746	chr1,chr1,chr1	+,-,-	ANXA9,LASS2,LASS2	-342,-7350,-7350
chr11:62599095-62599297	chr11	+	62599099	62599298	True	NM_003164,NM_018093,NM_001012662	chr11,chr11,chr11	-,-,+	STX5,WDR74,SLC3A2	312,8380,24185
chr16:90139898-90140173	chr16	+	90140132	90140196	True	NR_023348	chr16	+	GAS8	-51176
chr11:64359262-64359691	chr11	+	64359374	64359710	True	NM_153378,NM_144585,NM_138734	chr11,chr11,chr11	+,+,-	SLC22A12,SLC22A12,NRXN2	-1143,-1143,51127
chr12:71554724-71555895	chr12	+	71554924	71555911	True	NM_003667,NM_004616	chr12,chr12	+,-	LGR5,TSPAN8	277901,-3145
chr7:139768228-139769934	chr7	+	139768579	139769746	True	NM_022750,NR_024451	chr7,chr7	-,+	PARP12,LOC100134229	-5058,107314
chr3:19972945-19973232	chr3	+	19972949	19973248	True	NM_144715,NM_004162	chr3,chr3	-,+	EFHB,RAB5A	2511,15323
chrX:144898883-144899161	chrX	+	144898886	144899110	True	NM_004709,NM_032539,NM_001144010,NM_001144003,NM_001144004,NM_001144005,NM_001144006,NR_030589,NM_001144008,NM_001144009	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,+,+,-,+,+	CXorf1,SLITRK2,SLITRK2,SLITRK2,SLITRK2,SLITRK2,SLITRK2,MIR890,SLITRK2,SLITRK2	9817,236,3755,236,236,236,3755,176809,3755,3755
chr10:124190059-124190929	chr10	+	124190124	124190974	True	NM_001010912,NR_037506	chr10,chr10	-,+	C10orf120,MIR3941	268414,-13695
chr1:200379255-200380760	chr1	+	200379522	200380468	True	NM_001105517,NM_012482	chr1,chr1	+,-	FAM58B,ZNF281	-196923,-356
chr15:52586784-52587352	chr15	+	52586792	52587394	True	NM_018728,NM_002748	chr15,chr15	-,+	MYO5C,MAPK6	651,-275433
chr12:102131462-102131699	chr12	+	102131466	102131682	True	NM_153694,NM_001177949,NM_001177948,NM_020244	chr12,chr12,chr12,chr12	-,-,-,+	SYCP3,SYCP3,SYCP3,CHPT1	1618,1618,1618,-40106
chr10:35380131-35380639	chr10	+	35380157	35380527	True	NM_001198777,NM_003591,NM_001881	chr10,chr10,chr10	-,-,+	CUL2,CUL2,CREM	-587,-846,35273
chr1:115257939-115258934	chr1	+	115257948	115258961	True	NM_003176,NM_002524	chr1,chr1	+,-	SYCP1,NRAS	138493,605
chrX:41193366-41193569	chrX	+	41193421	41193507	True	NM_001193417,NM_001193416,NM_001356,NR_027761	chrX,chrX,chrX,chrX	+,+,+,-	DDX3X,DDX3X,DDX3X,LOC100132831	-821,-821,-821,-500972
chr4:122993628-122994697	chr4	+	122993790	122994713	True	NM_001130698,NM_015312	chr4,chr4	-,+	TRPC3,KIAA1109	-120881,97044
chr7:94285805-94286791	chr7	+	94285867	94286687	True	NM_003919,NM_001099400,NM_001184962,NM_001184961,NM_001172438,NM_001099401,NM_015068,NM_001172437,NM_001040152	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,+,+,+,-,+,+,+	SGCE,SGCE,PEG10,PEG10,PEG10,SGCE,PEG10,PEG10,PEG10	-346,-346,-281,-281,-236,-346,-281,-236,-281
chr14:88457839-88458691	chr14	+	88457841	88458726	True	NM_001037525,NM_001201402,NM_001201401,NM_000153,NM_003608	chr14,chr14,chr14,chr14,chr14	-,-,-,-,+	GALC,GALC,GALC,GALC,GPR65	939,1333,939,939,12741
chr1:55103431-55104121	chr1	+	55103461	55103906	True	NR_026782,NR_037639,NM_001039464,NR_037640,NR_037641,NM_176782	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-	HEATR8,HEATR8-TTC4,HEATR8,HEATR8-TTC4,HEATR8-TTC4,FAM151A	3520,3520,3520,3520,3520,-14261
chr9:140658440-140658659	chr9	+	140658560	140658706	True	NM_032937,NR_024341	chr9,chr9	-,+	C9orf37,FLJ40292	-145252,-1137
chr2:46745961-46746302	chr2	+	46745966	46746232	True	NM_080653,NM_012249	chr2,chr2	-,+	ATP6V1E2,RHOQ	914,23634
chr5:140579044-140579962	chr5	+	140579145	140579827	True	NM_018932,NM_031947,NM_018930,NM_018931	chr5,chr5,chr5,chr5	+,-,+,+	PCDHB12,SLC25A2,PCDHB10,PCDHB11	8463,103835,-7244,46
chr15:64674445-64675113	chr15	+	64674704	64674905	True	NM_014736,NM_001029989,NM_016213	chr15,chr15,chr15	-,-,+	KIAA0101,KIAA0101,TRIP4	-1002,-1002,5097
chr1:17338851-17339201	chr1	+	17338916	17339192	True	NM_014675,NM_001141974,NM_001141973,NM_022089	chr1,chr1,chr1,chr1	+,-,-,-	CROCC,ATP13A2,ATP13A2,ATP13A2	-90522,-493,-493,-493
chr1:6613824-6614068	chr1	+	6614001	6614065	True	NM_177540,NM_024654,NM_138697	chr1,chr1,chr1	+,-,+	TAS1R1,NOL9,TAS1R1	1272,643,1272
chr13:111609199-111611065	chr13	+	111609696	111611093	True	NM_017664,NM_001113511	chr13,chr13	-,+	ANKRD10,ARHGEF7	-42280,156530
chr20:3026027-3026479	chr20	+	3026039	3026423	True	NM_001501,NM_178331,NM_000490,NM_178332,NM_030811	chr20,chr20,chr20,chr20,chr20	+,+,-,+,+	GNRH2,GNRH2,AVP,GNRH2,MRPS26	-1823,-1823,38997,-1823,251
chr2:131356250-131356962	chr2	+	131356288	131356960	True	NR_027314,NM_032545,NM_001079530	chr2,chr2,chr2	+,-,-	LOC150527,CFC1,CFC1B	-27917,172,341
chr2:131356250-131356962	chr2	-	131278957	131279629	False	NR_027314,NM_032545,NM_001079530	chr2,chr2,chr2	-,+,+	LOC150527,CFC1,CFC1B	27889,-172,-341
chr17:53854126-53856120	chr17	+	53854371	53856143	True	NM_001102402,NM_001099640	chr17,chr17	+,-	PCTP,TMEM100	-25963,-44889
chr8:40749553-40751204	chr8	+	40749628	40751012	True	NM_001174124,NM_024645,NM_001135731	chr8,chr8,chr8	+,-,-	GOLGA7,ZMAT4,ZMAT4	597068,4381,4381
chr5:131347868-131348429	chr5	+	131347906	131348374	True	NM_001205247,NM_001205251,NM_001205250,NM_001205248,NM_000588,NM_015256,NM_001009185	chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,+,-,-	ACSL6,ACSL6,ACSL6,ACSL6,IL3,ACSL6,ACSL6	-551,-299,-145,-299,47972,-551,-551
chr14:104395098-104395456	chr14	+	104395197	104395504	True	NM_001127393,NM_153046,NM_004894	chr14,chr14,chr14	-,+,-	C14orf2,TDRD9,C14orf2	-7294,-431,-7294
chr15:34516360-34516810	chr15	+	34516506	34516719	True	NM_024713,NM_016454	chr15,chr15	-,+	C15orf29,TMEM85	-14209,525
chr9:27104143-27105310	chr9	+	27104280	27105280	True	NM_000459,NM_022901	chr9,chr9	+,-	TEK,LRRC19	3866,-98589
chr12:56232948-56233331	chr12	+	56233090	56233232	True	NR_036478,NR_036479,NM_002429,NM_032364,NR_036476,NR_036477	chr12,chr12,chr12,chr12,chr12,chr12	+,+,-,-,+,+	LOC440104,LOC440104,MMP19,DNAJC14,LOC440104,LOC440104	-9758,-9758,3553,-9670,-9758,-9758
chr20:35803983-35804454	chr20	+	35804202	35804271	True	NM_152503,NM_001135771,NM_213632,NM_002951,NM_213631	chr20,chr20,chr20,chr20,chr20	-,+,-,+,-	C20orf132,RPN2,C20orf132,RPN2,C20orf132	3760,3184,3760,3184,3760
chrX:41308557-41309620	chrX	+	41308577	41309460	True	NM_022567,NM_001126054	chrX,chrX	+,-	NYX,CASK	-1917,472880
chr14:34957314-34958417	chr14	+	34957384	34958435	True	NR_002937,NM_138288	chr14,chr14	+,-	C14orf19,C14orf147	450692,-25916
chr14:21571498-21571726	chr14	+	21571557	21571761	True	NM_016423,NM_001101672,NM_001146683,NM_001102454	chr14,chr14,chr14,chr14	-,-,+,-	ZNF219,ZNF219,C14orf176,ZNF219	-4749,-4384,-4512,1152
chr2:27254849-27255246	chr2	+	27255069	27255149	True	NM_001083590,NM_017727,NM_001134693	chr2,chr2,chr2	+,+,-	TMEM214,TMEM214,OST4	624,624,39468
chr22:42977048-42977266	chr22	+	42977112	42977266	True	NR_002184,NM_014509	chr22,chr22	-,+	RRP7B,SERHL2	801,-27248
chr22:42977048-42977266	chr22	+	42915000	42915050	False	NR_027786,NM_015703	chr22,chr22	+,-	SERHL,RRP7A	-18466,829
chr17:55122823-55123059	chr17	+	55122938	55123005	True	NM_004645,NR_002818	chr17,chr17	-,+	COIL,RNF126P1	-84527,-150
chr19:54023287-54024021	chr19	+	54023630	54024036	True	NM_018555,NR_002938	chr19,chr19	+,-	ZNF331,LOC284379	140,82765
chr1:235487066-235487519	chr1	+	235487144	235487567	True	NM_031371,NM_001037277,NM_016374,NR_036605,NM_004837	chr1,chr1,chr1,chr1,chr1	-,+,-,+,+	ARID4B,GGPS1,ARID4B,GGPS1,GGPS1	4023,4185,4023,4301,4301
chr3:9996970-9998338	chr3	+	9996986	9998108	True	NM_207351,NM_001077415	chr3,chr3	-,+	PRRT3,CRELD1	-2908,-21512
chr7:6591045-6592665	chr7	+	6591170	6592021	True	NM_001134387,NM_001145118	chr7,chr7	+,-	ZDHHC4,GRID2IP	25043,-103
chr19:12074576-12074964	chr19	+	12074575	12074941	True	NM_001080411,NM_001012753	chr19,chr19	-,+	ZNF433,ZNF763	71634,927
chr7:117829326-117830878	chr7	+	117829998	117830885	True	NM_033427,NM_016200	chr7,chr7	-,+	CTTNBP2,NAA38	-316437,-5974
chr3:17781351-17781872	chr3	+	17781836	17781918	True	NM_014744,NM_001134380,NR_037465	chr3,chr3,chr3	-,-,+	TBC1D5,TBC1D5,MIR3714	531,2372,-807200
chr3:51931483-51931949	chr3	+	51931570	51931896	True	NM_152397,NM_203424	chr3,chr3	-,+	IQCF1,IQCF2	5540,-35976
chr1:116314575-116315217	chr1	+	116314633	116315101	True	NM_001232,NM_001172412	chr1,chr1	-,+	CASQ2,VANGL1	-3207,-129434
chr2:189659127-189659508	chr2	+	189659238	189659329	True	NM_052952,NM_000090	chr2,chr2	-,+	DIRC1,COL3A1	-4407,179769
chr19:14887721-14887963	chr19	+	14887819	14887896	True	NM_152917,NM_152916,NM_152919,NM_152918,NM_032433,NM_013447,NM_152920,NM_152921	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,+,-,-,-	EMR2,EMR2,EMR2,EMR2,ZNF333,EMR2,EMR2,EMR2	1508,1508,1508,1508,-87002,1508,1508,1508
chr1:84944974-84945213	chr1	+	84944994	84945185	True	NM_025065,NM_005274	chr1,chr1	+,-	RPF1,GNG5	-125,27127
chr22:39355760-39356201	chr22	+	39355759	39356161	True	NM_014292,NM_001193289,NM_145699	chr22,chr22,chr22	-,+,+	CBX6,APOBEC3A,APOBEC3A	-87501,-2283,-2283
chr19:589102-589359	chr19	+	589112	589358	True	NM_001194,NM_005035	chr19,chr19	+,-	HCN2,POLRMT	534,44260
chr11:86510154-86510896	chr11	+	86510345	86510809	True	NM_007173,NM_001161586	chr11,chr11	+,-	PRSS23,ME3	681,-126667
chr2:85818599-85819577	chr2	+	85818689	85819569	True	NM_016494,NM_001031738,NM_006634	chr2,chr2,chr2	+,-,+	RNF181,TMEM150A,VAMP5	3267,10303,-7209
chr18:13612076-13612360	chr18	+	13612099	13612341	True	NM_001003675,NM_001003674,NM_001098801,NM_181483,NM_004338	chr18,chr18,chr18,chr18,chr18	+,+,-,+,+	C18orf1,C18orf1,C18orf19,C18orf1,C18orf1	-485,-485,114300,8525,8525
chr16:855641-856041	chr16	+	855701	855986	True	NM_001013638,NM_016541	chr16,chr16	+,-	PRR25,GNG13	-309,-4968
chr2:172964132-172964774	chr2	+	172964264	172964524	True	NM_178120,NM_004405	chr2,chr2	+,-	DLX1,DLX2	-14113,3011
chr15:57208293-57208952	chr15	+	57208396	57208991	True	NM_003205,NM_207038,NM_207037,NR_015419,NM_207036	chr15,chr15,chr15,chr15,chr15	+,+,+,-,+	TCF12,TCF12,TCF12,LOC145783,TCF12	1841,1841,1841,1757,1841
chr5:132118064-132119555	chr5	+	132118211	132119403	True	NM_175873,NM_001098811,NM_015146,NM_001098813,NM_001098812	chr5,chr5,chr5,chr5,chr5	+,-,-,-,-	ANKRD43,SEPT8,SEPT8,SEPT8,SEPT8	29629,-5144,-5144,-4650,-5144
chr14:74252900-74253265	chr14	+	74252963	74253314	True	NM_001146154,NM_001043318	chr14,chr14	+,-	PTGR2,C14orf43	65219,632
chr1:61541674-61542582	chr1	+	61541833	61542565	True	NM_001145511,NM_005595,NM_001145512,NM_032027,NM_001134673	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	NFIA,NFIA,NFIA,TM2D1,NFIA	380,5414,4968,648580,5414
chr12:132908183-132908876	chr12	+	132908230	132908865	True	NM_001122636,NR_024563	chr12,chr12	-,+	GALNT9,LOC100130238	-2325,-56304
chr1:92693018-92694922	chr1	+	92693117	92694889	True	NM_053274,NM_001012425	chr1,chr1	-,+	GLMN,C1orf146	69727,-9604
chr12:111180005-111180207	chr12	+	111180017	111180241	True	NM_152591,NM_002710	chr12,chr12	+,-	CCDC63,PPP1CC	104569,566
chr3:33482844-33483096	chr3	+	33482843	33483037	True	NM_001171713,NM_014517,NM_001128161,NM_001128160	chr3,chr3,chr3,chr3	+,-,-,-	FBXL2,UBP1,UBP1,UBP1	-163957,-973,-946,-973
chr1:154973983-154974315	chr1	+	154974045	154974233	True	NM_015872,NM_018655,NM_003029	chr1,chr1,chr1	+,+,-	ZBTB7B,LENEP,SHC1	878,-8034,-27086
chr8:67342108-67342310	chr8	+	67342143	67342241	True	NM_001080416,NM_015169,NM_144650	chr8,chr8,chr8	-,+,+	MYBL1,RRS1,ADHFE1	183289,-931,2476
chr8:12989695-12989998	chr8	+	12989834	12990015	True	NM_001099677,NM_006094	chr8,chr8	+,-	KIAA1456,DLC1	-120112,846
chr20:21283354-21283635	chr20	+	21283452	21283582	True	NM_012255,NM_033176	chr20,chr20	+,-	XRN2,NKX2-4	359,94515
chr2:95791835-95793512	chr2	+	95792215	95793288	True	NM_031902,NM_001017396	chr2,chr2	-,+	MRPS5,ZNF2	-4461,37894
chr10:81442987-81443716	chr10	+	81443057	81443451	True	NR_027512,NM_001098668	chr10,chr10	+,-	LOC650623,SFTPA2	-377,-122894
chr10:81442987-81443716	chr10	+	52418369	52418419	False	NM_147156,NM_001079516	chr10,chr10	-,+	SGMS1,ASAH2B	-34632,81288
chr2:97303613-97303856	chr2	+	97303640	97303764	True	NM_017991,NM_001113382,NM_001115016	chr2,chr2,chr2	-,+,-	KIAA1310,FER1L5,KIAA1310	401,4809,401
chr2:65663173-65663378	chr2	+	65663350	65663412	True	NM_181784,NM_005722	chr2,chr2	-,+	SPRED2,ACTR2	-3694,-208572
chr2:233272736-233273215	chr2	+	233272781	233273253	True	NM_031313,NR_028501	chr2,chr2	+,-	ALPPL2,ECEL1P2	-1280,-21027
chr2:233272736-233273215	chr2	+	233244878	233245000	False	NR_028501,NM_001632	chr2,chr2	-,+	ECEL1P2,ALPP	6804,-1581
chr4:3547054-3547294	chr4	+	3547111	3547289	True	NM_002337,NM_173660	chr4,chr4	-,+	LRPAP1,DOK7	-12887,-82129
chr14:74018760-74019133	chr14	+	74018810	74019126	True	NM_203309,NM_001037161	chr14,chr14	-,+	HEATR4,ACOT1	6575,-14938
chr14:74018760-74019133	chr14	+	74051109	74051313	False	NM_152331,NM_203309	chr14,chr14	+,-	ACOT4,HEATR4	7096,-25458
chrY:23672307-23673227	chrY	+	23672860	23672930	True	NM_005058,NM_001006121,NM_001006120,NR_001537,NM_001006118	chrY,chrY,chrY,chrY,chrY	+,+,+,-,+	RBMY1A1,RBMY1B,RBMY1D,TTTY13,RBMY1E	327,293,333,83672,333
chrY:23672307-23673227	chrY	-	9162348	9162847	False	NR_001546,NR_001547,NM_001164471	chrY,chrY,chrY	-,-,+	TTTY20,RBMY1A3P,TSPY4	9644,-1865,32604
chrY:23672307-23673227	chrY	+	23696401	23696471	False	NM_005058,NM_001006121,NM_001006120,NR_001537	chrY,chrY,chrY,chrY	+,+,+,-	RBMY1A1,RBMY1B,RBMY1D,TTTY13	327,293,333,60131
chrY:23672307-23673227	chrY	-	24040966	24041036	False	NM_005058,NM_001006121,NR_001527,NM_001006120,NM_001006118	chrY,chrY,chrY,chrY,chrY	-,-,+,-,-	RBMY1A1,RBMY1B,TTTY6,RBMY1D,RBMY1E	-327,-293,250075,-333,-333
chrY:23672307-23673227	chrY	-	24064507	24064577	False	NM_001006120,NM_001006121,NR_001527,NM_001006118	chrY,chrY,chrY,chrY	-,-,+,-	RBMY1D,RBMY1B,TTTY6,RBMY1E	-333,-293,226534,-333
chr1:15271176-15271823	chr1	+	15271188	15271822	True	NM_001017999,NR_027136	chr1,chr1	+,-	KAZN,C1orf126	592,207194
chr11:18034795-18035059	chr11	+	18034883	18035105	True	NM_012139,NM_054031	chr11,chr11	-,+	SERGEF,MRGPRX3	-246,107396
chr19:19303790-19304202	chr19	+	19303799	19304179	True	NM_001145784,NM_005919,NM_003721,NM_001145783,NM_134440,NR_027307,NR_027308	chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,+,-,+,-,-	LOC729991,LOC729991-MEF2B,RFXANK,LOC729991,RFXANK,LOC729991-MEF2B,LOC729991-MEF2B	-399,-399,-842,-399,-842,-399,-399
chr22:37448873-37449146	chr22	+	37448905	37449147	True	NM_024681,NM_003312	chr22,chr22	+,-	KCTD17,TST	-1179,-33414
chr8:68660575-68660981	chr8	+	68660673	68661028	True	NM_020361,NM_025170	chr8,chr8	-,+	CPA6,PREX2	-2053,203574
chr7:72849592-72849808	chr7	+	72849606	72849772	True	NM_003508,NM_032408	chr7,chr7	+,-	FZD9,BAZ1B	-1548,86893
chr8:71314099-71314375	chr8	+	71314125	71314201	True	NM_006540,NM_001011720	chr8,chr8	-,+	NCOA2,XKR9	1869,267398
chr2:128156610-128158436	chr2	+	128156700	128158362	True	NM_000312,NM_006609	chr2,chr2	+,-	PROC,MAP3K2	17633,-55930
chr7:111849027-111850039	chr7	+	111849100	111849874	True	NM_021994,NM_014705	chr7,chr7	+,-	ZNF277,DOCK4	-2514,-2638
chr3:121455605-121456219	chr3	+	121455765	121456176	True	NM_004487,NM_018456	chr3,chr3	-,+	GOLGB1,EAF2	12485,97857
chr17:72921264-72921701	chr17	+	72921302	72921744	True	NM_173477,NM_178160	chr17,chr17	-,+	USH1G,OTOP2	-1951,-983
chr22:42016432-42016777	chr22	+	42016587	42016825	True	NM_015704,NM_001469	chr22,chr22	-,+	PPPDE2,XRCC6	286,469
chr10:51832540-51834400	chr10	+	51832572	51834365	True	NM_018232,NM_001005751,NM_001143974	chr10,chr10,chr10	+,+,-	FAM21B,FAM21A,ASAH2	3520,-4947,174055
chr10:51832540-51834400	chr10	+	46227569	46229116	False	NM_174890,NM_015262,NM_001169106,NM_001169107	chr10,chr10,chr10,chr10	-,+,+,+	ANUBL1,FAM21C,FAM21C,FAM21C	-59318,-4980,-4980,-4980
chr8:27335011-27336555	chr8	+	27335036	27336477	True	NM_001979,NM_000742	chr8,chr8	+,-	EPHX2,CHRNA2	12167,387
chr8:122651943-122652178	chr8	+	122651946	122652052	True	NR_002835,NM_005328	chr8,chr8	+,-	HAS2-AS1,HAS2	-411,1628
chr9:132818145-132818450	chr9	+	132818250	132818454	True	NM_001136557,NM_015033,NM_020960,NM_001136558	chr9,chr9,chr9,chr9	+,-,+,+	GPR107,FNBP1,GPR107,GPR107	-2321,-12777,-2321,-2321
chr11:57152986-57154418	chr11	+	57153008	57154224	True	NM_002728,NM_006093,NM_002559	chr11,chr11,chr11	-,-,+	PRG2,PRG3,P2RX3	3956,-4385,-47110
chr20:32579654-32579943	chr20	+	32579700	32579948	True	NM_016732,NM_007367,NM_003908	chr20,chr20,chr20	+,+,-	RALY,RALY,EIF2S2	1783,1783,120191
chrX:118829485-118830342	chrX	+	118829592	118830000	True	NM_145802,NM_145799,NM_145800,NM_001105576,NM_015129	chrX,chrX,chrX,chrX,chrX	-,-,-,+,-	SEPT6,SEPT6,SEPT6,ANKRD58,SEPT6	-2259,-2259,-2259,62575,-2259
chr4:99006911-99008802	chr4	+	99007010	99008609	True	NM_174952,NM_001100426	chr4,chr4	-,+	C4orf37,RAP1GDS1	55834,173917
chrX:135075872-135076422	chrX	+	135075962	135076235	True	NM_173470,NM_006359,NM_001177651,NM_001042537	chrX,chrX,chrX,chrX	-,+,+,+	MMGT1,SLC9A6,SLC9A6,SLC9A6	-19828,-8439,-8442,-8439
chrX:17879433-17879658	chrX	+	17879521	17879581	True	NM_006746,NM_001172739,NM_001172732,NR_033349,NR_033348,NM_021785,NM_001172743	chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,-,-,-,-,-,-	SCML1,RAI2,RAI2,RAI2,RAI2,RAI2,RAI2	-123980,-64,-64,-574,-574,-64,-64
chr11:47733380-47733592	chr11	+	47733380	47733540	True	NM_024783,NM_001164379	chr11,chr11	-,+	AGBL2,FAM180B	2812,-125207
chr4:119858506-119859333	chr4	+	119858541	119858811	True	NM_133477,NM_014822	chr4,chr4	+,-	SYNPO2,SEC24D	-48603,-101215
chr1:10005680-10005970	chr1	+	10005759	10005823	True	NM_032368,NM_022787	chr1,chr1	-,+	LZIC,NMNAT1	-2933,-2329
chr16:4899023-4899869	chr16	+	4899289	4899575	True	NM_001079514,NM_016936,NM_032569	chr16,chr16,chr16	+,+,-	UBN1,UBN1,GLYR1	-1436,2501,-1986
chr11:65409975-65410477	chr11	+	65410064	65410326	True	NM_006747,NM_153253,NM_001145138	chr11,chr11,chr11	+,+,-	SIPA1,SIPA1,RELA	-4537,-2523,20167
chr15:55610821-55611191	chr15	+	55610993	55611143	True	NM_004855,NM_183235	chr15,chr15	+,-	PIGB,RAB27A	-2,-28992
chr21:46131069-46131304	chr21	+	46131105	46131293	True	NM_198699,NM_144991	chr21,chr21	+,-	KRTAP10-12,TSPEAR	-14069,252
chr3:11297389-11298658	chr3	+	11297633	11298112	True	NM_000861,NM_001128221	chr3,chr3	+,-	HRH1,VGLL4	-3299,312337
chr19:11544127-11545282	chr19	+	11544223	11544474	True	NM_001001329,NM_145045,NM_002743	chr19,chr19,chr19	+,-,+	PRKCSH,CCDC151,PRKCSH	1794,1556,1794
chr4:2819640-2819859	chr4	+	2819689	2819763	True	NM_001145855,NM_001145856,NM_024309,NM_003023	chr4,chr4,chr4,chr4	+,+,-,+	SH3BP2,SH3BP2,TNIP2,SH3BP2	-5794,148,-61586,777
chr3:101441027-101441679	chr3	+	101441027	101441665	True	NR_002941,NM_000986,NM_024548	chr3,chr3,chr3	+,-,+	LOC285359,RPL24,CEP97	-9805,-35464,1828
chr4:141444894-141445121	chr4	+	141444961	141445081	True	NM_021833,NM_153702	chr4,chr4	-,+	UCP1,ELMOD2	44928,230
chr18:44559798-44560011	chr18	+	44559858	44559926	True	NM_145653,NM_001100817,NM_016427,NM_031303	chr18,chr18,chr18,chr18	-,-,-,+	TCEB3C,TCEB3CL,TCEB3B,KATNAL2	-3409,-3645,2112,-33122
chr4:489482-489760	chr4	+	489739	489809	True	NM_133474,NM_001127178,NM_017733	chr4,chr4,chr4	-,+,+	ZNF721,PIGG,PIGG	3683,3179,3179
chr15:52054511-52056368	chr15	+	52054596	52056229	True	NM_001143917,NM_014548	chr15,chr15	-,+	LYSMD2,TMOD2	-10946,-10889
chr7:131400304-131401058	chr7	+	131400462	131400903	True	NM_005397,NM_013255	chr7,chr7	-,+	PODXL,MKLN1	-159086,-387924
chr10:116443587-116444257	chr10	+	116443631	116444133	True	NM_001003408,NM_020940,NM_001003407	chr10,chr10,chr10	-,+,-	ABLIM1,FAM160B1,ABLIM1	331,137369,331
chr8:67581883-67582539	chr8	+	67582030	67582578	True	NM_019607,NM_001204173,NM_025054	chr8,chr8,chr8	+,+,-	C8orf44,C8orf44-SGK3,VCPIP1	-2302,-2302,-2578
chr6:13925431-13925838	chr6	+	13925654	13925838	True	NM_001165034,NM_001031713,NM_152737,NM_001165032,NM_001165033	chr6,chr6,chr6,chr6,chr6	+,-,+,+,+	RNF182,CCDC90A,RNF182,RNF182,RNF182	-1031,-110865,-610,-610,-284
chr11:1143807-1144206	chr11	+	1143865	1143980	True	NM_002457,NM_005961	chr11,chr11	+,-	MUC2,MUC6	-69041,-107159
chr17:32694511-32695993	chr17	+	32694639	32695893	True	NM_005408,NM_002981	chr17,chr17	+,-	CCL13,CCL1	-11219,-4387
chr17:48451639-48453207	chr17	+	48452356	48453076	True	NM_152463,NM_016504,NM_001166131	chr17,chr17,chr17	+,-,+	EME1,MRPL27,EME1	-1833,-1794,-1833
chr18:43652396-43652600	chr18	+	43652419	43652625	True	NM_024430,NM_138443	chr18,chr18	-,+	PSTPIP2,HAUS1	-169,31672
chr1:179103597-179104132	chr1	+	179103633	179103846	True	NM_022371,NM_001168239,NM_001136000,NM_005158	chr1,chr1,chr1,chr1	+,-,-,-	TOR3A,ABL2,ABL2,ABL2	-52572,8429,8429,8429
chr1:179103597-179104132	chr8	+	81084082	81084280	False	NM_005079,NM_001025253,NM_001105539	chr8,chr8,chr8	-,-,+	TPD52,TPD52,ZBTB10	-246,-246,314167
chr6:18158527-18160177	chr6	+	18158582	18160204	True	NM_000367,NM_153042	chr6,chr6	-,+	TPMT,KDM1B	-3208,-3026
chr14:94598458-94599694	chr14	+	94598458	94599588	True	NM_032036,NM_005532	chr14,chr14	-,+	IFI27L2,IFI27	-2501,-21435
chr1:231376587-231376835	chr1	+	231376599	231376817	True	NM_152379,NM_014236	chr1,chr1	-,+	C1orf131,GNPAT	157,101
chr3:42699931-42700201	chr3	+	42699935	42700119	True	NM_145166,NR_027753	chr3,chr3	+,-	ZBTB47,HHATL	-4810,42944
chr1:1476814-1477121	chr1	+	1476930	1477118	True	NM_001170536,NM_001114748	chr1,chr1	+,-	ATAD3A,C1orf70	-29071,-1190
chr1:62194013-62194271	chr1	+	62194022	62194083	True	NM_176877,NM_032027	chr1,chr1	+,-	INADL,TM2D1	14065,-2927
chr3:52445101-52445805	chr3	+	52445162	52445838	True	NM_173341,NM_004656,NM_016483	chr3,chr3,chr3	+,-,+	PHF7,BAP1,PHF7	-687,-1153,-687
chrY:14107436-14107803	chrY	+	14107506	14107776	True	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	666521,425663
chrY:14107436-14107803	chrX	-	3228126	3228342	False	NM_004042,NM_015419	chrX,chrX	+,-	ARSF,MXRA5	-243337,36394
chr11:51512249-51513527	chr11	+	51512641	51512906	True	NM_001004703,NM_001005272	chr11,chr11	+,-	OR4C46,OR4A5	2375,-100193
chr4:106067332-106067534	chr4	+	106067375	106067467	True	NM_001127208,NM_006903,NM_017628	chr4,chr4,chr4	+,-,+	TET2,PPA2,TET2	374,327810,-394
chr5:68628689-68628909	chr5	+	68628726	68628916	True	NM_176816,NM_133343	chr5,chr5	-,+	CCDC125,RAD17	-12316,36207
chr1:43804448-43804946	chr1	+	43804568	43804934	True	NM_022821,NM_005373	chr1,chr1	-,+	ELOVL1,MPL	28815,-1144
chr19:6333655-6334214	chr19	+	6333730	6333850	True	NM_006012,NM_133492	chr19,chr19	+,-	CLPP,ACER1	27612,-90
chr19:10611654-10612025	chr19	+	10611667	10611879	True	NM_203500,NM_012289,NM_032885	chr19,chr19,chr19	-,-,+	KEAP1,KEAP1,ATG4D	2225,1652,42767
chr11:14545422-14546254	chr11	+	14545421	14546273	True	NM_001143937,NM_002786,NM_000922	chr11,chr11,chr11	-,-,+	PSMA1,PSMA1,PDE3B	-3430,-3430,118995
chr17:7577835-7578468	chr17	+	7578174	7578450	True	NM_001126116,NM_001126117,NM_001126115,NM_001143990	chr17,chr17,chr17,chr17	-,-,-,+	TP53,TP53,TP53,WRAP53	411,411,411,10938
chr20:60639343-60639624	chr20	+	60639392	60639564	True	NM_144703,NM_003185	chr20,chr20	+,-	LSM14B,TAF4	57952,1352
chr6:3443890-3444854	chr6	+	3444078	3444797	True	NM_021945,NM_001128592	chr6,chr6	-,+	SLC22A23,PSMG4	471,-184967
chr9:69651008-69652000	chr9	+	69651174	69651686	True	NM_001085457,NR_024443	chr9,chr9	-,+	CBWD6,LOC100133920	-388581,-88
chr9:69651008-69652000	chr9	+	67289447	67289735	False	NM_032250,NR_002817	chr9,chr9	+,-	ANKRD20A1,AQP7P1	637025,45
chr5:124179476-124179817	chr5	+	124179599	124179773	True	NM_004384,NM_020747	chr5,chr5	+,-	CSNK1G3,ZNF608	-1331865,-98794
chr10:35439305-35439716	chr10	+	35439349	35439428	True	NM_001198777,NM_183012	chr10,chr10	-,+	CUL2,CREM	-59779,-12701
chr17:43566981-43567893	chr17_ctg5_hap1	+	182124	182606	False	NM_014798,NR_027774,NR_027782,NM_001113738	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	-,-,-,+	PLEKHM1,PLEKHM1,PLEKHM1,ARL17A	658,658,658,13114
chr17:43566981-43567893	chr17	+	43567056	43567538	True	NR_037772,NM_014798,NR_027774,NR_027782	chr17,chr17,chr17,chr17	+,-,-,-	CRHR1,PLEKHM1,PLEKHM1,PLEKHM1	130171,658,658,658
chr17:43566981-43567893	chr17	+	62832211	62832331	False	NR_024386,NM_001165933	chr17,chr17	-,+	PLEKHM1P,RGS9	1021,301124
chr19:50181513-50182231	chr19	+	50181593	50182085	True	NM_001571,NM_001101340,NM_198318,NM_001536,NR_033397	chr19,chr19,chr19,chr19,chr19	-,+,+,+,+	IRF3,C19orf76,PRMT1,PRMT1,PRMT1	-12461,9856,-1148,-1148,-1148
chr18:72173663-72173879	chr18	+	72173663	72173928	True	NM_001044369,NM_001168499	chr18,chr18	-,+	FAM69C,CNDP2	-49160,-6891
chr11:57436101-57437019	chr11	+	57436118	57436819	True	NM_015457,NM_145008	chr11,chr11	+,-	ZDHHC5,YPEL4	-695,-18701
chr16:71264156-71264405	chr16	+	71264193	71264397	True	NM_032821,NM_001198542,NM_001198543,NM_001740,NM_017558	chr16,chr16,chr16,chr16,chr16	-,-,-,+,-	HYDIN,HYDIN,HYDIN,CALB2,HYDIN	222,278,278,128218,245
chr1:92949664-92949895	chr1	+	92949738	92949930	True	NM_001127216,NM_001127215,NM_024813,NM_005263	chr1,chr1,chr1,chr1	-,-,+,-	GFI1,GFI1,RPAP2,GFI1	1748,-382,-185267,2553
chr17:40429246-40429932	chr17	+	40429262	40429750	True	NM_012448,NM_003152	chr17,chr17	-,+	STAT5B,STAT5A	-838,9814
chr9:5450494-5452011	chr9	+	5450633	5451599	True	NM_014143,NM_018465	chr9,chr9	+,-	CD274,C9orf46	-181,-12773
chr8:124254107-124254501	chr8	+	124254488	124254550	True	NM_032847,NM_207006	chr8,chr8	-,+	C8orf76,FAM83A	-850,-59787
chr17:38474821-38475162	chr17	+	38474875	38475024	True	NM_000964,NM_001145301,NM_001145302,NM_152219	chr17,chr17,chr17,chr17	+,+,+,-	RARA,RARA,RARA,GJD3	-9503,-453,-453,45978
chr3:195808543-195808762	chr3	+	195808566	195808676	True	NM_003234,NR_034088,NM_001128148	chr3,chr3,chr3	-,+,-	TFRC,LOC401109,TFRC	335,60830,406
chr7:140900067-140900283	chr7	+	140900073	140900323	True	NM_053035,NM_001195278	chr7,chr7	-,+	MRPS33,LOC100131199	-185292,-126092
chr9:140473465-140473678	chr9	+	140473516	140473718	True	NM_152285,NM_138778	chr9,chr9	+,-	ARRDC1,WDR85	26377,-129
chr1:161092176-161092904	chr1	+	161092201	161092798	True	NM_001039711,NM_001185094,NM_001039712,NM_005600,NM_012394,NM_032998,NM_001185092,NM_001185093	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,+,-,+,-,-,+,+	DEDD,NIT1,DEDD,NIT1,PFDN2,DEDD,NIT1,NIT1	9737,-4344,9515,-4390,-4335,9737,-4390,-4345
chr19:14066123-14066499	chr19	+	14066262	14066355	True	NM_138353,NM_001146255,NM_001146254	chr19,chr19,chr19	+,-,-	DCAF15,PODNL1,PODNL1	-3003,-2058,-2058
chr1:149783871-149784569	chr1	+	149783907	149784587	True	NM_001024599,NM_001161334,NM_001123375,NM_001034077	chr1,chr1,chr1,chr1	-,-,-,+	HIST2H2BF,HIST2H2BF,HIST2H3D,HIST2H4B	21,21,699,19633
chr1:149783871-149784569	chr1	-	120905962	120906013	False	NR_027337,NM_001004340	chr1,chr1	+,-	HIST2H2BA,FCGR1B	20,29982
chr1:149783871-149784569	chr1	+	149399208	149399893	False	NR_027484,NM_001024599	chr1,chr1	+,-	FCGR1C,HIST2H2BF	-29966,21
chr22:29674668-29676215	chr22	+	29674999	29676027	True	NM_013986,NM_012265	chr22,chr22	+,-	EWSR1,RHBDD3	-11053,-11085
chr1:247334671-247334917	chr1	+	247334709	247334817	True	NM_173858,NM_003431	chr1,chr1	+,-	VN1R5,ZNF124	84556,551
chr1:247334671-247334917	chr1	-	247290228	247290336	False	NM_173858,NM_207401	chr1,chr1	+,-	VN1R5,C1orf229	129037,-14509
chr12:49760057-49760357	chr12	+	49760134	49760346	True	NM_001008223,NM_023071	chr12,chr12	-,+	C1QL4,SPATS2	-29163,341
chr19:58281366-58281616	chr19	+	58281367	58281463	True	NM_017652,NM_001077426,NM_001204814,NM_024833	chr19,chr19,chr19,chr19	+,+,+,-	ZNF586,ZNF586,ZNF586,ZNF671	-398,-398,-398,-42372
chr17:74705804-74706051	chr17	+	74705857	74706051	True	NM_001008528,NM_001008529,NM_001080510,NM_198530	chr17,chr17,chr17,chr17	-,-,+,-	MXRA7,MXRA7,METTL23,MXRA7	1055,1055,16898,1055
chr22:36042594-36042876	chr22	+	36042682	36042826	True	NM_203377,NM_030641	chr22,chr22	-,+	MB,APOL6	-23281,1597
chr19:14607441-14607722	chr19	+	14607613	14607763	True	NM_001146693,NM_202494,NM_202468,NM_005716,NM_202469,NM_202467,NM_202470	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,-,-,-,-,-	LOC100130932,GIPC1,GIPC1,GIPC1,GIPC1,GIPC1,GIPC1	-7906,-669,-669,-669,-669,-669,-669
chr19:42719945-42720835	chr19	+	42719984	42720758	True	NM_133444,NM_133328	chr19,chr19	+,-	ZNF526,DEDD2	3733,1105
chr15:74502186-74503900	chr15	+	74502288	74503684	True	NM_022369,NM_001199042,NM_001199040,NM_001199041,NM_001142619,NM_001142618,NM_001142617,NM_001142620,NM_025055	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,-,-,-,-,-,-,+	STRA6,STRA6,STRA6,STRA6,STRA6,STRA6,STRA6,STRA6,CCDC33	-7068,-7068,-242,-1893,-917,-6732,-917,-917,24982
chr4:8593813-8594336	chr4	+	8593820	8594266	True	NM_001014447,NM_003501,NM_001014448,NM_003652	chr4,chr4,chr4,chr4	+,-,+,+	CPZ,ACOX3,CPZ,CPZ	120,-151368,120,120
chr14:102414120-102414456	chr14	+	102414157	102414447	True	NM_001376,NM_005348	chr14,chr14	+,-	DYNC1H1,HSP90AA1	16417,139115
chr13:96326836-96328443	chr13	+	96327379	96328487	True	NM_006260,NM_198968	chr13,chr13	+,-	DNAJC3,DZIP1	905,-30422
chr22:43809545-43810535	chr22	+	43809789	43810327	True	NM_173050,NM_001044370	chr22,chr22	-,+	SCUBE1,MPPED1	-70434,-1820
chr1:160990970-160991324	chr1	+	160991010	160991336	True	NR_033385,NM_016946	chr1,chr1	+,-	KLHDC9,F11R	76814,-7
chrX:144325770-144326388	chrX	+	144325958	144326437	True	NR_030589,NM_001009614	chrX,chrX	-,+	MIR890,SPANXN1	749483,2669
chr10:77542583-77544177	chr10	+	77542775	77544182	True	NM_032772,NM_032024	chr10,chr10	-,+	ZNF503,C10orf11	-381262,-308
chr10:71892187-71892425	chr10	+	71892235	71892375	True	NM_032797,NM_001198696,NM_018649	chr10,chr10,chr10	-,-,+	AIFM2,AIFM2,H2AFY2	365,365,-79929
chr9:33080501-33081373	chr9	+	33080635	33081341	True	NM_001539,NM_018225	chr9,chr9	+,-	DNAJA1,SMU1	-55477,-3921
chr8:56041921-56043592	chr8	+	56042013	56043423	True	NM_052898,NR_027765	chr8,chr8	+,-	XKR4,SBF1P1	-27056,324508
chr2:20189292-20189613	chr2	+	20189320	20189518	True	NM_001006657,NR_033875,NM_020779	chr2,chr2,chr2	-,+,-	WDR35,FLJ12334,WDR35	416,-120756,416
chr20:57873498-57875316	chr20	+	57873832	57875190	True	NR_037930,NM_207033,NM_207032,NM_000114,NM_207034	chr20,chr20,chr20,chr20,chr20	-,+,+,+,+	SLMO2-ATP5E,EDN3,EDN3,EDN3,EDN3	-255931,308,308,308,308
chr1:210407236-210407439	chr1	+	210407260	210407437	True	NR_024337,NM_019605	chr1,chr1	-,+	C1orf133,SERTAD4	79,-1116
chr19:37406857-37407141	chr19	+	37406913	37407129	True	NM_001037232,NM_001171979,NM_001204838,NM_001204839,NM_198539,NM_001204835,NM_001204836,NM_001204837	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,+,+,+,+,+,+	ZNF829,ZNF829,ZNF568,ZNF568,ZNF568,ZNF568,ZNF568,ZNF568	114,0,101,101,101,101,101,101
chr19:51361595-51363027	chr19	+	51361732	51362988	True	NM_138564,NM_001030047,NM_001030048,NM_001648,NM_001030050	chr19,chr19,chr19,chr19,chr19	-,+,+,+,+	KLK15,KLK3,KLK3,KLK3,KLK3	-26953,-3612,-3612,-3612,-3612
chr17:6945774-6945985	chr17	+	6945917	6945977	True	NM_201566,NM_153357	chr17,chr17	+,-	SLC16A13,SLC16A11	-6574,1315
chr10:60344873-60346282	chr10	+	60344962	60346147	True	NM_001080512,NM_152230	chr10,chr10	+,-	BICC1,IPMK	-72110,-317268
chrX:26766062-26766773	chrX	+	26766069	26766791	True	NR_001559,NR_002784	chrX,chrX	+,-	VENTXP1,SMEK3P	-189666,714717
chr11:5264661-5265691	chr11	+	5264756	5265746	True	NM_000559,NR_001589,NM_000519,NM_001004750	chr11,chr11,chr11,chr11	-,-,-,+	HBG1,HBBP1,HBD,OR51B6	5399,66,-8898,106991
chrX:102632172-102633233	chrX	+	102632297	102632961	True	NM_206915,NM_206917,NM_014380,NM_032621	chrX,chrX,chrX,chrX	+,+,+,-	NGFRAP1,NGFRAP1,NGFRAP1,BEX2	-1080,-1080,-239,-66323
chr10:99202741-99203370	chr10	+	99202890	99203269	True	NM_016046,NM_032327,NM_198043,NM_198045,NM_198044,NM_198046	chr10,chr10,chr10,chr10,chr10,chr10	-,+,+,+,+,+	EXOSC1,ZDHHC16,ZDHHC16,ZDHHC16,ZDHHC16,ZDHHC16	2550,2660,2660,2660,2660,2677
chr15:51060197-51061449	chr15	+	51060201	51061412	True	NM_032802,NM_007347	chr15,chr15	-,+	SPPL2A,AP4E1	-2291,139533
chr1:93646593-93647330	chr1	+	93646770	93647016	True	NM_016040,NM_206886,NM_001167830,NR_030761	chr1,chr1,chr1,chr1	-,+,-,-	TMED5,CCDC18,TMED5,TMED5	-524,-540,-524,-524
chr18:12701902-12702387	chr18	+	12702170	12702262	True	NM_020232,NM_024899	chr18,chr18	+,-	PSMG2,CEP76	724,491
chr15:34632868-34634619	chr15	+	34633566	34634421	True	NM_133647,NM_018648,NM_001042497,NM_001042494,NM_001042495,NM_001042496,NM_175741	chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,-,-,-,-,+	SLC12A6,NOP10,SLC12A6,SLC12A6,SLC12A6,SLC12A6,C15orf55	-4521,998,-4521,-3605,-3301,-3605,3644
chr3:43147213-43147485	chr3	+	43147251	43147513	True	NM_001129908,NM_032806	chr3,chr3	+,-	FAM198A,C3orf39	-126543,102
chrX:154236930-154237223	chrX	+	154237087	154237269	True	NM_023934,NM_000132	chrX,chrX	+,-	FUNDC2,F8	17794,13779
chrX:154236930-154237223	chrX	-	153780685	153780783	False	NM_003639,NM_001099857,NM_001042351,NM_000402,NM_001145255	chrX,chrX,chrX,chrX,chrX	+,+,-,-,+	IKBKG,IKBKG,G6PD,G6PD,IKBKG	-4674,-5174,-4898,-5452,-5174
chr20:13201842-13202067	chr20	+	13201934	13202115	True	NM_080826,NM_017714	chr20,chr20	+,-	ISM1,TASP1	302,417518
chr10:23726722-23726960	chr10	+	23726726	23726980	True	NM_153714,NM_001145373	chr10,chr10	-,+	C10orf67,OTUD1	-92954,1217
chr16:29673808-29674071	chr16	+	29673957	29674045	True	NR_002593,NM_001030288,NM_003123	chr16,chr16,chr16	-,+,+	SLC7A5P1,SPN,SPN	-48919,254,534
chr6:28937142-28937855	chr6_qbl_hap6	+	240678	241246	False	NM_001195202,NM_001010877	chr6_qbl_hap6,chr6_qbl_hap6	+,-	LOC100129636,ZNF311	66150,35238
chr6:28937142-28937855	chr6	+	28937278	28937846	True	NM_001195202,NM_001010877	chr6,chr6	+,-	LOC100129636,ZNF311	66153,35241
chr6:28937142-28937855	chr6_mann_hap4	+	240683	241251	False	NM_001195202,NM_001010877	chr6_mann_hap4,chr6_mann_hap4	+,-	LOC100129636,ZNF311	66149,35237
chr6:28937142-28937855	chr6_ssto_hap7	+	278184	278752	False	NM_001195202,NM_001010877	chr6_ssto_hap7,chr6_ssto_hap7	+,-	LOC100129636,ZNF311	66127,35216
chr6:28937142-28937855	chr6_cox_hap2	+	456016	456584	False	NM_001195202,NM_001010877	chr6_cox_hap2,chr6_cox_hap2	+,-	LOC100129636,ZNF311	66235,35312
chr10:99184247-99184625	chr10	+	99184370	99184546	True	NM_002629,NM_016046	chr10,chr10	+,-	PGAM1,EXOSC1	1480,21272
chr17:4837671-4838629	chr17	+	4837678	4838239	True	NM_000173,NM_001165417,NM_015528,NM_003562,NM_001165418	chr17,chr17,chr17,chr17,chr17	+,-,+,-,-	GP1BA,SLC25A11,RNF167,SLC25A11,SLC25A11	-2137,5284,5390,5284,5284
chr4:123749411-123750524	chr4	+	123749578	123750364	True	NM_007083,NM_002006	chr4,chr4	-,+	NUDT6,FGF2	93446,-1766
chr22:32443593-32443867	chr22	+	32443617	32443859	True	NM_015372,NM_000343	chr22,chr22	-,+	C22orf24,SLC5A1	-102281,-4649
chr11:8988739-8989857	chr11	+	8988768	8989497	True	NM_182901,NM_020644	chr11,chr11	+,-	C11orf17,TMEM9B	-56017,-2779
chr16:4382835-4383129	chr16	+	4382875	4383121	True	NM_032575,NM_016069	chr16,chr16	+,-	GLIS2,PAM16	-701,18302
chr8:36636804-36637231	chr8	+	36636881	36637079	True	NM_001031836,NR_003671	chr8,chr8	+,-	KCNU1,LOC728024	4762,968535
chr5:96146321-96146724	chr5	+	96146373	96146767	True	NM_001198541,NM_001040458,NM_001130140,NM_016442	chr5,chr5,chr5,chr5	-,-,+,-	ERAP1,ERAP1,ERAP2,ERAP1	3131,-2481,64876,-2481
chr4:115556430-115557571	chr4	+	115557157	115557616	True	NM_022569,NM_003360	chr4,chr4	-,+	NDST4,UGT8	477473,-13692
chr6:122931651-122932073	chr6	+	122931829	122932043	True	NM_020755,NM_181795,NM_032471	chr6,chr6,chr6	-,+,+	SERINC1,PKIB,PKIB	-138877,-503,-503
chr8:1922848-1923977	chr8	+	1923030	1924016	True	NR_033895,NM_014867	chr8,chr8	-,+	LOC286083,KBTBD11	-672203,-1037
chr1:226128561-226128784	chr1	+	226128580	226128740	True	NM_003240,NM_000120,NM_001172425	chr1,chr1,chr1	-,+,-	LEFTY2,EPHX1,LEFTY2	393,-115629,393
chr4:72221560-72222800	chr4	+	72221705	72222820	True	NM_000583,NM_003759	chr4,chr4	-,+	GC,SLC4A4	427309,-16987
chr19:55998190-55998625	chr19	+	55998286	55998547	True	NM_024710,NM_001144950,NM_020378,NM_001195267	chr19,chr19,chr19,chr19	-,+,+,+	ISOC2,SSC5D,NAT14,SSC5D	-25237,1322,-1780,1322
chr5:80509339-80510281	chr5	+	80509338	80510253	True	NR_034121,NR_002754,NR_002755	chr5,chr5,chr5	-,+,+	LOC100131067,RNU5E,RNU5D	87185,-7934,-7933
chr1:236223658-236224705	chr1	+	236224096	236224724	True	NM_002508,NM_003272	chr1,chr1	-,+	NID1,GPR137B	3807,81107
chr6:143938024-143938633	chr6	+	143938220	143938581	True	NM_001100166,NR_027113,NM_014721	chr6,chr6,chr6	+,-,+	PHACTR2,LOC285740,PHACTR2	-8955,-47744,-8955
chr14:42076837-42077325	chr14	+	42076938	42077316	True	NM_152447,NM_203301	chr14,chr14	+,-	LRFN5,FBXO33	-225,-2175234
chr19:19382498-19383353	chr19	+	19382672	19383191	True	NM_023002,NM_001001524,NM_015329	chr19,chr19,chr19	-,-,+	HAPLN4,TM6SF2,MAU2	-9076,936,48438
chr7:112428080-112429423	chr7	+	112428213	112429445	True	NM_182597,NM_022484	chr7,chr7	+,-	C7orf53,TMEM168	-307198,1093
chr11:67034635-67034841	chr11	+	67034691	67034783	True	NM_001619,NM_021173	chr11,chr11	+,-	ADRBK1,POLD4	-837,86319
chr17:27331602-27332050	chr17	+	27331631	27331861	True	NM_001098635,NM_178860,NM_016518	chr17,chr17,chr17	-,-,+	SEZ6,SEZ6,PIPOX	1270,1270,38056
chr19:11877345-11877755	chr19	+	11877380	11877754	True	NM_152355,NM_001080493	chr19,chr19	+,-	ZNF441,ZNF823	60,-27620
chr15:78590684-78591932	chr15	+	78590767	78591616	True	NM_025234,NM_001130183	chr15,chr15	-,+	WDR61,DNAJA4	375,-32260
chr16:4399739-4400524	chr16	+	4399817	4400111	True	NM_032575,NM_016069	chr16,chr16	+,-	GLIS2,PAM16	-17643,1312
chr3:172857495-172858643	chr3	+	172857805	172858689	True	NM_014932,NM_031955	chr3,chr3	+,-	NLGN1,SPATA16	257554,419
chr19:57674619-57675663	chr19	+	57674640	57675599	True	NM_001012729,NM_003417	chr19,chr19	-,+	DUXA,ZNF264	3310,27268
chr2:219263380-219263643	chr2	+	219263491	219263579	True	NM_022152,NM_021198,NR_029500,NM_182642	chr2,chr2,chr2,chr2	-,+,+,+	TMBIM1,CTDSP1,MIR26B,CTDSP1	-106211,898,3789,1234
chr20:56300356-56300969	chr20	+	56300584	56300874	True	NM_002591,NM_199171	chr20,chr20	+,-	PCK1,PMEPA1	-164498,-14043
chr1:231763285-231765062	chr1	+	231763317	231765094	True	NM_001164537,NM_018662,NM_001164538,NM_001164539,NM_001012957,NM_001012958,NM_001012959,NR_034037,NM_001164549,NM_001164548,NM_001164542,NM_001164541,NM_001164540,NM_001164547,NM_001164546,NM_001164545,NM_001164544,NM_001164550,NM_001164551,NM_001164552,NM_001164553,NM_001164554,NM_001164555,NM_001164556	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,+,+,-,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+	DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,LOC100287814,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1	-807,-807,-807,-807,-807,-807,-807,-15481,-807,-807,-807,-807,-807,-807,-807,-807,-807,-807,-807,-807,-807,-807,-807,-807
chr12:50369418-50370312	chr12	+	50369579	50370359	True	NM_001126103,NM_001652	chr12,chr12	-,+	RACGAP1,AQP6	48998,-3010
chr18:59947640-59948298	chr18	+	59947657	59948187	True	NM_176787,NM_003839	chr18,chr18	-,+	PIGN,TNFRSF11A	-93368,44360
chr19:23396045-23396575	chr19	+	23396144	23396258	True	NR_003662,NM_003430	chr19,chr19	+,-	RPSAP58,ZNF91	549557,182067
chr1:78445270-78445860	chr1	+	78445277	78445912	True	NM_007034,NM_003902	chr1,chr1	+,-	DNAJB4,FUBP1	24723,-500
chr12:8242875-8243286	chr12	+	8242884	8243115	True	NM_004054,NM_015509,NR_024260	chr12,chr12,chr12	-,+,+	C3AR1,NECAP1,NECAP1	-23929,-8130,-8130
chr7:16793955-16794679	chr7	+	16794063	16794653	True	NM_006408,NM_014399	chr7,chr7	-,+	AGR2,TSPAN13	50135,-763
chr7:63021013-63021764	chr7	+	63021304	63021790	True	NR_028349,NR_036246	chr7,chr7	-,+	LOC100287834,MIR4283-1	-161885,59677
chr7:63021013-63021764	chr7	-	57083167	57083653	False	NR_036270,NR_036102	chr7,chr7	-,+	MIR4283-2,MIR3147	-59596,389077
chr12:113860198-113861401	chr12	+	113860433	113861279	True	NM_138432,NM_006843	chr12,chr12	+,-	SDSL,SDS	-268,-18741
chr4:8593017-8593717	chr4	+	8593236	8593696	True	NM_001014447,NM_003501,NM_001014448,NM_003652	chr4,chr4,chr4,chr4	+,-,+,+	CPZ,ACOX3,CPZ,CPZ	690,-150784,690,690
chr19:45393211-45393544	chr19	+	45393377	45393527	True	NM_145288,NM_006114,NM_001128916,NM_001128917	chr19,chr19,chr19,chr19	-,+,+,+	ZNF296,TOMM40,TOMM40,TOMM40	186211,949,949,949
chr17:57185477-57186395	chr17	+	57185640	57185941	True	NM_001005207,NM_015294,NM_018304	chr17,chr17,chr17	-,-,+	TRIM37,TRIM37,PRR11	-1374,-1374,46918
chr13:95953988-95954315	chr13	+	95953999	95954353	True	NM_001105515,NM_005845,NM_001160100	chr13,chr13,chr13	-,-,+	ABCC4,ABCC4,CLDN10	-312,-312,131499
chr19:42460650-42460885	chr19	+	42460675	42460884	True	NM_006423,NM_199002	chr19,chr19	-,+	RABAC1,ARHGEF1	2695,-72281
chr3:14167931-14169016	chr3	+	14168044	14169034	True	NM_144636,NM_001098502,NM_024334	chr3,chr3,chr3	-,-,+	CHCHD4,CHCHD4,TMEM43	-1673,-1673,-1662
chr11:76748457-76750411	chr11	+	76748607	76750355	True	NM_182833,NM_138706	chr11,chr11	-,+	GDPD4,B3GNT6	248158,-3223
chr16:28635508-28635907	chr16	+	28635563	28635711	True	NM_001199142,NM_177536	chr16,chr16	+,-	EIF3C,SULT1A1	64167,-697
chr2:225863623-225865421	chr2	+	225864085	225865303	True	NM_014689,NM_020864	chr2,chr2	-,+	DOCK10,KIAA1486	42077,400298
chr11:120199083-120200923	chr11	+	120200217	120200950	True	NM_001198665,NM_001198674,NM_001198675,NM_001198672,NM_001198673,NM_001198670,NM_001198671,NM_012101,NM_174926,NM_015313	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,+,+,-,+,+	ARHGEF12,TMEM136,TMEM136,TMEM136,TMEM136,TMEM136,TMEM136,TRIM29,TMEM136,ARHGEF12	6667,-4437,-4437,-4437,-4437,-4437,-4437,-191354,-4437,6667
chr10:97315486-97316465	chr10	+	97315536	97315912	True	NM_024991,NM_015385,NM_001098175	chr10,chr10,chr10	-,-,+	SORBS1,SORBS1,ENTPD1	5309,5309,155623
chr20:60942637-60943101	chr20	+	60942768	60943102	True	NM_001024,NM_005560	chr20,chr20	+,-	RPS21,LAMA5	19018,-400
chr1:156051319-156051521	chr1	+	156051328	156051460	True	NM_001093725,NM_020387	chr1,chr1	-,+	MEX3A,RAB25	379,-20413
chr22:38432600-38432893	chr22	+	38432636	38432910	True	NM_013356,NM_001039583	chr22,chr22	-,+	SLC16A8,PICK1	46310,20351
chr1:23606464-23607642	chr1	+	23606714	23607351	True	NR_033690,NM_001102397	chr1,chr1	+,-	C1orf213,HNRNPR	88112,63552
chr15:58726662-58727000	chr15	+	58726713	58727035	True	NR_002927,NM_000236	chr15,chr15	-,+	HSP90AB4P,LIPC	258339,-2589
chr1:6551183-6551572	chr1	+	6551227	6551559	True	NM_001042665,NM_001042664,NM_020631,NM_138697,NM_001042663	chr1,chr1,chr1,chr1,chr1	-,-,-,+,-	PLEKHG5,PLEKHG5,PLEKHG5,TAS1R1,PLEKHG5	-5213,-587,251,63778,5975
chr8:29799109-29799745	chr8	+	29799508	29799790	True	NR_036104,NR_024473	chr8,chr8	-,+	MIR3148,LOC286135	15124,-20543
chr1:205771435-205772151	chr1	+	205771437	205771965	True	NM_173854,NM_181644	chr1,chr1	-,+	SLC41A1,MFSD4	10257,-233376
chr5:168729312-168729726	chr5	+	168729506	168729764	True	NM_017785,NM_003062	chr5,chr5	+,-	CCDC99,SLIT3	280873,-1373
chr14:100789145-100789566	chr14	+	100789243	100789565	True	NM_001039355,NM_207117	chr14,chr14	-,+	SLC25A29,SLC25A47	-16383,113
chr4:4862229-4862466	chr4	+	4862287	4862501	True	NM_002448,NM_018659	chr4,chr4	+,-	MSX1,CYTL1	-946,158746
chr8:68257960-68259063	chr8	+	68258172	68259088	True	NM_024790,NM_006421	chr8,chr8	+,-	CSPP1,ARFGEF1	-281621,-2260
chr6:15092243-15092645	chr6	+	15092477	15092636	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	153890,570704
chr2:61390661-61391210	chr2	+	61390776	61391188	True	NM_001143959,NR_036496	chr2,chr2	+,-	C2orf74,LOC339803	-1208,-18666
chr14:93210421-93211099	chr14	+	93210560	93210856	True	NM_005606,NM_005113,NM_001008530	chr14,chr14,chr14	-,+,-	LGMN,GOLGA5,LGMN	4251,49793,4251
chr16:75463473-75464189	chr16	+	75463561	75464026	True	NM_006324,NM_007285	chr16,chr16	-,+	CFDP1,GABARAPL2	3414,136222
chr17:42387300-42388095	chr17	+	42387360	42388002	True	NM_001144826,NM_001143780,NM_001144825,NM_006695	chr17,chr17,chr17,chr17	+,-,+,+	RUNDC3A,SLC25A39,RUNDC3A,RUNDC3A	-1484,14265,-1484,-1484
chr3:107629332-107629930	chr3	+	107629387	107629811	True	NR_015394,NR_024276	chr3,chr3	+,-	LOC285205,LOC151658	-27394,-32472
chr17:16592095-16592600	chr17	+	16592095	16592448	True	NM_020787,NM_014695	chr17,chr17	-,+	ZNF624,CCDC144A	-34928,1190
chr9:33075229-33076544	chr9	+	33075466	33076306	True	NM_001539,NM_018225	chr9,chr9	+,-	DNAJA1,SMU1	-50317,458
chr2:179193508-179194689	chr2	+	179193544	179194563	True	NM_001139518,NM_145739	chr2,chr2	-,+	PRKRA,OSBPL6	120842,-8636
chr17:75447347-75447551	chr17	+	75447426	75447600	True	NM_001113496,NR_036200	chr17,chr17	+,-	SEPT9,MIR4316	-864,-54290
chr20:44186202-44187577	chr20	+	44186676	44187591	True	NM_020398,NM_080753	chr20,chr20	-,+	SPINLW1,WFDC10A	-10611,70793
chr2:242089395-242089693	chr2	+	242089401	242089663	True	NM_015148,NM_002712	chr2,chr2	-,+	PASK,PPP1R7	-523,238
chr17:72579220-72580949	chr17	+	72579423	72580974	True	NM_152460,NM_001115152	chr17,chr17	+,-	C17orf77,CD300LD	82,7446
chr14:105636857-105637486	chr14	+	105636914	105637524	True	NM_033271,NM_145159,NM_002226	chr14,chr14,chr14	+,-,-	BTBD6,JAG2,JAG2	77354,-1753,-1753
chr11:2423984-2424252	chr11	+	2424076	2424232	True	NM_005706,NM_014555	chr11,chr11	+,-	TSSC4,TRPM5	-604,20093
chr19:42778839-42780270	chr19	+	42778873	42780267	True	NM_006494,NM_015125	chr19,chr19	-,+	ERF,CIC	-19564,8549
chr7:97841181-97841635	chr7	+	97841213	97841585	True	NM_015395,NM_177455	chr7,chr7	-,+	TECPR1,BHLHA15	39933,-20
chr10:23635198-23635821	chr10	+	23635213	23635593	True	NM_153714,NM_001145373	chr10,chr10	-,+	C10orf67,OTUD1	-1441,92604
chr3:14213330-14214003	chr3	+	14213384	14213976	True	NM_004628,NM_014463,NR_027299,NM_001145769	chr3,chr3,chr3,chr3	-,+,-,-	XPC,LSM3,XPC,XPC	6246,6251,6246,6246
chr9:108451425-108451866	chr9	+	108451612	108451894	True	NM_018112,NM_005502	chr9,chr9	+,-	TMEM38B,ABCA1	4930,-761085
chr20:46013617-46013862	chr20	+	46013617	46013901	True	NM_183048,NR_024594	chr20,chr20	-,+	ZMYND8,LOC100131496	-28143,-66423
chr14:45579944-45580696	chr14	+	45579970	45580552	True	NM_002013,NR_003691	chr14,chr14	-,+	FKBP3,SNORD127	23241,-48
chr5:137898162-137900036	chr5	+	137898503	137899705	True	NM_001964,NR_002913	chr5,chr5	+,-	EGR1,SNORD63	-97373,-1704
chr11:12030504-12030745	chr11	+	12030718	12030780	True	NM_013253,NM_014632,NM_015881,NM_001018057	chr11,chr11,chr11,chr11	-,+,-,-	DKK3,MICAL2,DKK3,DKK3	187,101357,-89,-532
chr1:28584209-28585610	chr1	+	28584934	28585646	True	NM_031459,NM_014280	chr1,chr1	+,-	SESN2,DNAJC8	316,-25392
chr16:1875733-1876191	chr16	+	1875882	1876152	True	NM_005326,NM_001040427,NM_031208,NM_001142398,NM_001018104	chr16,chr16,chr16,chr16,chr16	-,-,+,+,+	HAGH,HAGH,FAHD1,FAHD1,FAHD1	1093,1093,1072,1072,1072
chrX:100878997-100879258	chrX	+	100879054	100879296	True	NM_019007,NM_001009584,NM_001184768,NR_033670,NM_016607,NM_177948,NM_177947,NR_033669	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,+,+,+,-	ARMCX6,ARMCX6,ARMCX6,ARMCX6,ARMCX3,ARMCX3,ARMCX3,ARMCX6	-6063,-6063,-6063,-6063,-985,-754,-985,-6063
chr12:127614717-127615279	chr12	+	127614763	127615101	True	NR_033970,NR_015398	chr12,chr12	-,+	LOC440117,LOC100128554	-255527,-687787
chr16:1463460-1463777	chr16	+	1463634	1463742	True	NM_032520,NM_001193388,NM_001037125	chr16,chr16,chr16	+,-,-	GNPTG,UNKL,UNKL	-61785,1013,1013
chr3:122746586-122746815	chr3	+	122746588	122746776	True	NM_006810,NM_001031702	chr3,chr3	+,-	PDIA5,SEMA5B	39079,-12
chr14:29243232-29243527	chr14	+	29243271	29243525	True	NM_002742,NR_026731,NR_026732,NM_005249	chr14,chr14,chr14,chr14	-,+,+,+	PRKD1,C14orf23,C14orf23,FOXG1	1153424,-1412,-1412,-7035
chr17:36765509-36766441	chr17	+	36765859	36766279	True	NM_025248,NM_005937	chr17,chr17	-,+	SRCIN1,MLLT6	-3676,95593
chr7:1173564-1174224	chr7	+	1173830	1173890	True	NM_001134396,NM_001134395,NM_032350,NM_001098201	chr7,chr7,chr7,chr7	-,-,-,+	C7orf50,C7orf50,C7orf50,GPER	4053,4053,4053,-46158
chr10:35632611-35633675	chr10	+	35632610	35633258	True	NM_001198777,NM_145012	chr10,chr10	-,+	CUL2,CCNY	-253040,-6869
chr19:23579055-23579476	chr19	+	23579441	23579507	True	NR_003662,NM_003430	chr19,chr19	+,-	RPSAP58,ZNF91	366308,-1172
chr4:39982937-39984724	chr4	+	39983015	39984495	True	NM_001100399,NM_001100400,NM_018177	chr4,chr4,chr4	-,-,+	PDS5A,PDS5A,N4BP2	-3439,-3439,74028
chr15:93199625-93201179	chr15	+	93199636	93200898	True	NR_033769,NM_207446	chr15,chr15	+,-	ASB9P1,FAM174B	137815,-605
chr11:119188850-119189111	chr11	+	119188850	119189114	True	NM_032015,NM_006500	chr11,chr11	+,-	RNF26,MCAM	16122,-1010
chr3:186737939-186738294	chr3	+	186738109	186738339	True	NM_003032,NM_052969	chr3,chr3	+,-	ST6GAL1,RPL39L	1325,118975
chr6:12291664-12292242	chr6	+	12291703	12292275	True	NM_001168319,NM_032744,NM_001955	chr6,chr6,chr6	+,-,+	EDN1,C6orf105,EDN1	-1228,-512423,-1228
chr1:92417185-92419043	chr1	+	92417613	92418907	True	NM_207189,NM_001195684,NM_001726	chr1,chr1,chr1	+,-,+	BRDT,TGFBR3,BRDT	-2746,-46054,35
chr14:33405862-33407142	chr14	+	33405924	33407098	True	NM_001164749,NM_001165893,NR_027263,NM_173159,NM_022123	chr14,chr14,chr14,chr14,chr14	+,+,-,+,+	NPAS3,NPAS3,C14orf128,NPAS3,NPAS3	1360,1360,-860019,1360,1360
chr19:11448691-11449036	chr19	+	11448696	11448954	True	NM_001080503,NM_001145416,NM_033408,NM_004283,NM_198536	chr19,chr19,chr19,chr19,chr19	+,-,-,-,-	CCDC159,TMEM205,TMEM205,RAB3D,TMEM205	8226,8077,8077,1440,8077
chr17:41837244-41837687	chr17	+	41837317	41837645	True	NM_025237,NM_001136483	chr17,chr17	-,+	SOST,C17orf105	-1161,20157
chr1:153643557-153644107	chr1	+	153643579	153643993	True	NM_000906,NM_004515	chr1,chr1	+,-	NPR1,ILF2	7170,-100
chr5:157165878-157166396	chr5	+	157166271	157166439	True	NM_173491,NM_017872,NM_178424	chr5,chr5,chr5	+,+,-	LSM11,THG1L,SOX30	4315,-8003,-86843
chr4:48131571-48132502	chr4	+	48131610	48132452	True	NM_003328,NM_207330	chr4,chr4	-,+	TXK,NIPAL1	3871,-112870
chr13:80914217-80914580	chr13	+	80914341	80914461	True	NM_019080,NM_005842	chr13,chr13	+,-	NDFIP2,SPRY2	-859133,675
chr5:140870422-140870699	chr5	+	140870434	140870718	True	NM_032406,NM_032407,NM_018929,NM_018928,NM_001079812	chr5,chr5,chr5,chr5,chr5	+,+,+,+,-	PCDHGC4,PCDHGC5,PCDHGC5,PCDHGC4,DIAPH1	-5747,-1680,-1680,-5747,127954
chr1:209928345-209928893	chr1	+	209928450	209928859	True	NM_152485,NM_025228	chr1,chr1	-,+	C1orf74,TRAF3IP3	29088,534
chr1:155231825-155232077	chr1	+	155231825	155232099	True	NM_020897,NM_198264,NM_052837,NM_005698,NM_006589	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	HCN3,FAM189B,SCAMP3,SCAMP3,FAM189B	15274,-6551,146,146,-6551
chr1:43229947-43231802	chr1	+	43230255	43231841	True	NM_022356,NM_001146289,NM_024097	chr1,chr1,chr1	-,-,+	LEPRE1,LEPRE1,C1orf50	964,964,1074
chr12:104323327-104323583	chr12	+	104323344	104323461	True	NM_003299,NR_037425,NR_027249	chr12,chr12,chr12	+,+,-	HSP90B1,MIR3652,GNN	727,741,579
chr5:126625868-126626083	chr5	+	126625947	126626131	True	NM_032446,NM_001164478	chr5,chr5	+,-	MEGF10,FLJ44606	324,-216763
chr19:58915255-58916139	chr19	+	58915397	58915531	True	NM_001195135,NM_138466,NM_173548	chr19,chr19,chr19	+,-,+	LOC646862,ZNF837,ZNF584	-7995,-23008,4531
chr8:146018131-146018344	chr8	+	146018205	146018343	True	NM_000973,NM_033301,NM_030580,NM_213605	chr8,chr8,chr8,chr8	-,-,-,+	RPL8,RPL8,ZNF34,ZNF517	-400,-476,-5480,5917
chr8:146022130-146022744	chr8	+	146022317	146022755	True	NM_000973,NM_033301,NM_030580,NM_213605	chr8,chr8,chr8,chr8	-,-,-,+	RPL8,RPL8,ZNF34,ZNF517	-4512,-4588,-9592,1505
chrX:96136709-96137341	chrX	+	96136708	96136992	True	NR_003539,NM_013347	chrX,chrX	-,+	LOC643486,RPA4	-543807,1914
chrX:9980260-9981668	chrX	+	9980411	9981368	True	NM_015691,NM_000273	chrX,chrX	+,-	WWC3,GPR143	2426,-246406
chr4:185746007-185746579	chr4	+	185746088	185746484	True	NM_152683,NM_001995	chr4,chr4	+,-	CCDC111,ACSL1	-175380,781
chr16:2208187-2208402	chr16	+	2208193	2208445	True	NR_002736,NM_014353,NM_032271	chr16,chr16,chr16	-,+,+	SNORD60,RAB26,TRAF7	-3087,-9593,-2445
chr11:46938765-46939099	chr11	+	46938844	46939024	True	NM_001003676,NM_002334	chr11,chr11	+,-	C11orf49,LRP4	19226,1199
chr21:30366757-30367152	chr21	+	30366837	30367032	True	NM_015565,NM_001001992	chr21,chr21	-,+	LTN1,USP16	-1560,29905
chr9:127177909-127178340	chr9	+	127177947	127178217	True	NM_002799,NM_001161808	chr9,chr9	-,+	PSMB7,GPR144	-226,35205
chrX:135928257-135929244	chrX	+	135928835	135928937	True	NR_002735,NM_000074	chrX,chrX	-,+	SNORD61,CD40LG	32543,-198558
chr19:10715610-10716267	chr19	+	10715650	10715732	True	NM_001145056,NM_005498	chr19,chr19	+,-	SLC44A2,AP1M2	-2580,-17659
chr3:48630084-48630492	chr3	+	48630112	48630388	True	NM_000094,NM_033629	chr3,chr3	-,+	COL7A1,TREX1	2255,-122934
chr15:78370559-78371138	chr15	+	78370604	78370820	True	NM_015079,NM_001101404,NM_144572	chr15,chr15,chr15	-,+,-	TBC1D2B,SH2D7,TBC1D2B	-610,14106,-610
chr21:46074035-46074390	chr21	+	46074040	46074196	True	NM_198697,NM_198698,NM_198692	chr21,chr21,chr21	+,-,+	KRTAP12-3,KRTAP12-4,KRTAP10-11	3652,430,-7760
chr6:88401013-88402801	chr6	+	88401180	88402205	True	NM_018064,NM_001197259,NR_002767	chr6,chr6,chr6	-,+,-	AKIRIN2,ORC3,AKIRIN2-AS1	9835,-101446,8783
chr9:79092037-79093252	chr9	+	79092476	79093270	True	NM_001097635,NM_018339	chr9,chr9	+,-	GCNT1,RFK	-14,-83032
chr19:1513924-1514474	chr19	+	1513959	1514403	True	NR_026557,NM_213604	chr19,chr19	+,-	PLK5P,ADAMTSL5	9674,-771
chr19:5905795-5907164	chr19	+	5906279	5907111	True	NR_034166,NM_001193375,NM_001017921,NM_175614,NM_004058,NM_080590	chr19,chr19,chr19,chr19,chr19,chr19	-,-,+,-,+,+	NDUFA11,NDUFA11,VMAC,NDUFA11,CAPS,CAPS	-2255,-2255,-1478,-2255,7081,7081
chr9:131081325-131082353	chr9	+	131081797	131081865	True	NM_016035,NM_015679	chr9,chr9	+,-	COQ4,TRUB2	2925,2882
chr1:154351230-154351877	chr1	+	154351568	154351744	True	NM_001010846,NM_000565	chr1,chr1	-,+	SHE,IL6R	122832,25924
chr3:195944262-195944906	chr3	+	195944607	195944871	True	NM_001039617,NM_152672	chr3,chr3	-,+	ZDHHC19,OSTalpha	-6307,-1275
chr11:190285-191912	chr11	+	190490	191954	True	NM_053280,NM_001097610,NM_145651,NM_001098787	chr11,chr11,chr11,chr11	+,+,+,-	ODF3,LOC653486,SCGB1C1,BET1L	4806,1125,1125,15518
chr22:44396376-44397052	chr22	+	44396426	44396829	True	NM_001003828,NM_138814	chr22,chr22	+,-	PARVB,PNPLA5	-1305,-108533
chr16:3703879-3704878	chr16	+	3704130	3704892	True	NM_005223,NM_032444	chr16,chr16	+,-	DNASE1,SLX4	-1241,-42545
chr7:76053512-76054465	chr7	+	76053568	76054461	True	NM_080744,NM_001110354	chr7,chr7	-,+	SRCRB4D,ZP3	-14556,-42
chr9:41431068-41431940	chr9	+	41431110	41431525	True	NM_015667	chr9	+	FAM75A7	69153
chr9:41431068-41431940	chr9	-	65578835	65579250	False	NR_024496,NM_015667	chr9,chr9	+,-	LOC442421,FAM75A7	915018,-69225
chr9:41431068-41431940	chr9	+	39286214	39286269	False	NM_033655,NM_001085452	chr9,chr9	-,+	CNTNAP3,FAM75A1	2086,69429
chr9:41431068-41431940	chr9	+	39815464	39815519	False	NR_003528,NM_001085452	chr9,chr9	-,+	LOC653501,FAM75A1	-350938,69455
chr4:54853189-54853690	chr4	+	54853232	54853569	True	NR_027153,NM_133267	chr4,chr4	-,+	RPL21P44,GSX2	-59,112678
chr9:99380287-99380813	chr9	+	99380368	99380844	True	NR_026792,NM_003671,NM_033331	chr9,chr9,chr9	+,-,-	LOC441455,CDC14B,CDC14B	107258,1318,1318
chr14:98630048-98631368	chr14	+	98630049	98631411	True	NR_015430,NM_182560	chr14,chr14	-,+	C14orf64,C14orf177	-185588,546538
chr3:139067162-139068323	chr3	+	139067197	139068324	True	NM_004766,NM_020191	chr3,chr3	-,+	COPB2,MRPS22	40261,-4387
chr15:77924076-77924433	chr15	+	77924085	77924461	True	NM_018200,NM_032808	chr15,chr15	+,-	HMG20A,LINGO1	-210893,298
chr7:128577051-128577682	chr7	+	128577134	128577552	True	NM_199349,NM_001098629,NM_001098630,NM_032643,NM_001098627	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	KCP,IRF5,IRF5,IRF5,IRF5	-26361,441,441,718,3219
chr7:83268349-83269490	chr7	+	83268625	83269525	True	NM_001178129,NM_012431,NM_001127444	chr7,chr7,chr7	-,-,+	SEMA3E,SEMA3E,CD36	1272,9004,-2992928
chr10:48418010-48418340	chr10	+	48418116	48418354	True	NM_016204,NM_153034	chr10,chr10	-,+	GDF2,ZNF488	-1263,-63078
chr2:69198181-69199826	chr2	+	69198242	69199741	True	NM_182536,NM_019617	chr2,chr2	-,+	GKN2,GKN1	-18140,1963
chr6:127623419-127623635	chr6	+	127623419	127623549	True	NM_030963,NM_001139510	chr6,chr6	+,-	RNF146,ECHDC1	-35453,40063
chr11:66055743-66056231	chr11	+	66055768	66056196	True	NM_020470,NM_153266	chr11,chr11	-,+	YIF1A,TMEM151A	492,3176
chr1:100437156-100437544	chr1	+	100437226	100437444	True	NM_012243,NM_194292	chr1,chr1	+,-	SLC35A3,SASS6	-1745,161129
chr6:52710228-52711459	chr6	+	52710261	52711506	True	NM_014051,NM_153699	chr6,chr6	+,-	TMEM14A,GSTA5	-174428,28
chr2:187455557-187457020	chr2	+	187455654	187456810	True	NM_002210,NM_001145000,NM_182521,NM_001144999	chr2,chr2,chr2,chr2	+,+,-,+	ITGAV,ITGAV,ZSWIM2,ITGAV	-915,-915,257148,8121
chr12:185116-185410	chr12	+	185184	185262	True	NM_015232,NM_001170738,NR_026823	chr12,chr12,chr12	+,+,-	IQSEC3,IQSEC3,FAM138D	1279,-9186,-35772
chrX:125688006-125689230	chrX	+	125688024	125689230	True	NM_001122716,NM_178470	chrX,chrX	+,-	CXorf64,DCAF12L1	264516,-1182
chr19:36105694-36106189	chr19	+	36105699	36106189	True	NM_000704,NM_015302	chr19,chr19	-,+	ATP4A,HAUS5	-51139,-2104
chr1:51840832-51842657	chr1	+	51841100	51842621	True	NM_014372,NM_001144832	chr1,chr1	+,-	RNF11,TTC39A	-139211,-30315
chr9:6759292-6759673	chr9	+	6759316	6759616	True	NM_000170,NM_015061,NM_001146695,NM_001146694	chr9,chr9,chr9,chr9	-,+,+,+	GLDC,KDM4C,KDM4C,KDM4C	-113624,-1733,-1733,-1733
chr22:22872558-22873698	chr22	+	22872560	22873387	True	NM_080740,NR_027426,NM_080764	chr22,chr22,chr22	-,+,-	ZNF280A,LOC648691,ZNF280B	1284,28368,-9055
chr4:6641559-6641945	chr4	+	6641724	6641788	True	NM_033296,NM_203462	chr4,chr4	+,-	MRFAP1,MRFAP1L1	656,69872
chr6:41754583-41754808	chr6	+	41754655	41754857	True	NM_001134493,NM_013397,NM_006653	chr6,chr6,chr6	+,+,-	TOMM6,PRICKLE4,FRS3	323,-6206,-7025
chr12:65674808-65675287	chr12	+	65674967	65675325	True	NM_007191,NM_001031679,NM_198080,NM_001193460,NM_001193461	chr12,chr12,chr12,chr12,chr12	-,+,+,+,+	WIF1,MSRB3,MSRB3,MSRB3,MSRB3	-159621,-2608,-2608,-2608,-2264
chr10:96100897-96101811	chr10	+	96100945	96101836	True	NM_022451,NM_015188	chr10,chr10	-,+	NOC3L,TBC1D12	20897,60349
chr11:76840443-76841018	chr11	+	76840450	76840947	True	NM_182833,NM_001127180,NM_000260,NM_001127179	chr11,chr11,chr11,chr11	-,+,+,+	GDPD4,MYO7A,MYO7A,MYO7A	157567,-1185,-1191,-1191
chr12:119744522-119745701	chr12	+	119744562	119745594	True	NR_024246,NM_178499	chr12,chr12	-,+	LOC144742,CCDC60	-3377,26922
chr3:97481527-97483165	chr3	+	97481622	97482988	True	NM_032146,NM_001042533,NM_177976	chr3,chr3,chr3	+,-,+	ARL6,MINA,ARL6	606,208286,606
chr8:37961711-37962448	chr8	+	37961900	37962408	True	NM_004674,NM_000349,NM_001105214	chr8,chr8,chr8	+,-,+	ASH2L,STAR,ASH2L	602,46242,940
chr7:101006627-101006933	chr7	+	101006916	101006982	True	NM_022777,NM_133457	chr7,chr7	-,+	RABL5,EMID2	-41823,-845
chr8:12221092-12222283	chr8	+	12221159	12221276	True	NR_024044,NR_026789	chr8,chr8	-,+	DEFB109P1,FAM66A	36661,-1682
chr8:12221092-12222283	chr8	+	7814206	7814277	False	NR_003668,NR_027424	chr8,chr8	-,+	DEFB109P1B,FAM66E	40829,-1735
chr15:22083819-22084144	chr18	+	14544209	14544527	False	NM_001137671,NM_001145029	chr18,chr18	-,+	POTEC,ANKRD30B	-610,203711
chr15:22083819-22084144	chr15	+	22083825	22084143	True	NR_015416,NM_207355	chr15,chr15	+,-	LOC727924,POTEB	193888,-688
chr15:22083819-22084144	chr15	+	21072664	21072982	False	NM_207355,NR_027411	chr15,chr15	-,+	POTEB,GOLGA8C	-687,-305041
chr15:22083819-22084144	chr21	-	14981152	14981470	False	NR_036164,NM_174981	chr21,chr21	-,+	MIR3156-3,POTED	-202371,1027
chr12:31810447-31811915	chr12	+	31810773	31811925	True	NM_144973,NM_173802,NM_001135863	chr12,chr12,chr12	-,+,+	DENND5B,METTL20,METTL20	-66821,195,683
chr12:12878217-12878539	chr12	+	12878216	12878518	True	NM_001130415,NM_006143,NM_004064	chr12,chr12,chr12	+,-,+	APOLD1,GPR19,CDKN1B	332,-29095,-7965
chr12:123832890-123834183	chr12	+	123833545	123834099	True	NM_018183,NM_020382,NM_001167856	chr12,chr12,chr12	-,+,-	SBNO1,SETD8,SBNO1	949,34604,949
chrX:151083318-151083820	chrX	+	151083349	151083679	True	NR_029973,NM_002362,NM_001011548,NM_001011549,NM_001011550	chrX,chrX,chrX,chrX,chrX	-,+,+,+,+	MIR452,MAGEA4,MAGEA4,MAGEA4,MAGEA4	44555,1029,-2039,1717,3080
chrX:151083318-151083820	chrX	+	151085393	151085723	False	NR_029973,NM_002362,NM_001011548,NM_001011549,NM_001011550	chrX,chrX,chrX,chrX,chrX	-,+,+,+,+	MIR452,MAGEA4,MAGEA4,MAGEA4,MAGEA4	42511,-735,-4083,-47,1036
chr11:1858038-1858328	chr11	+	1858076	1858322	True	NM_001145829,NR_036185,NM_138567,NM_001145841,NM_003282	chr11,chr11,chr11,chr11,chr11	+,-,+,+,+	TNNI2,MIR4298,SYT8,TNNI2,TNNI2	2396,22494,-2453,3109,1910
chr1:44434431-44435017	chr1	+	44434430	44435038	True	NM_001384,NM_003780,NM_004047,NM_001039457,NM_006934,NM_001039589	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,-,+	DPH2,B4GALT2,ATP6V0B,ATP6V0B,SLC6A9,DPH2	614,9827,5563,5563,48009,614
chr12:121164916-121165632	chr12	+	121164929	121165349	True	NM_000017,NM_198202	chr12,chr12	+,-	ACADS,POP5	-1409,-145728
chr7:140882010-140882366	chr7	+	140882023	140882413	True	NM_053035,NM_001195278	chr7,chr7	-,+	MRPS33,LOC100131199	-167242,-108042
chr17:72522774-72523865	chr17	+	72522905	72523841	True	NM_152460,NM_174892	chr17,chr17	+,-	C17orf77,CD300LB	57215,3822
chr5:85578379-85579306	chr5	+	85578386	85579316	True	NR_003719,NR_036243	chr5,chr5	+,-	NBPF22P,MIR4280	-182,831505
chr19:50094263-50094547	chr19	+	50094362	50094505	True	NM_000951,NM_015953,NM_020719	chr19,chr19,chr19	+,-,+	PRRG2,NOSIP,PRR12	-9826,-10559,406
chr10:7874671-7875936	chr10	+	7875115	7875977	True	NM_012311,NM_031923	chr10,chr10	-,+	KIN,TAF3	-45171,-14501
chr7:140943803-140944448	chr7	+	140943900	140944454	True	NM_053035,NM_001195278	chr7,chr7	-,+	MRPS33,LOC100131199	-229119,-169919
chrX:284087-284950	chrY	+	234086	234882	False	NM_012227,NR_027232,NR_027231	chrY,chrY,chrY	-,+,+	GTPBP6,NCRNA00107,NCRNA00107	-53199,-2752,-2752
chrX:284087-284950	chrX	+	284086	284882	True	NM_012227,NR_027232,NR_027231	chrX,chrX,chrX	-,+,+	GTPBP6,NCRNA00107,NCRNA00107	-53199,-2752,-2752
chr3:15138876-15140079	chr3	+	15139124	15140125	True	NM_022340,NM_014296	chr3,chr3	-,+	ZFYVE20,CAPN7	580,107607
chr11:89696174-89698056	chr11	+	89696286	89697644	True	NR_028346,NM_001136486	chr11,chr11	-,+	TRIM53,TRIM64	38091,4027
chr11:89696174-89698056	chr11	-	89613222	89614581	False	NM_001164397,NR_028346	chr11,chr11	-,+	TRIM64B,TRIM53	-4037,-38117
chr4:85417986-85418197	chr4	+	85418025	85418221	True	NM_001263,NM_006168	chr4,chr4	+,-	CDS1,NKX6-1	85835,1216
chr9:44758429-44758699	chr9	+	44758479	44758681	True	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	231554,-1127749
chr21:46424072-46424400	chr21	+	46424252	46424400	True	NM_058190,NR_024089	chr21,chr21	+,-	C21orf70,NCRNA00162	-64348,292
chr2:96072632-96074434	chr2	+	96072967	96074131	True	NM_001164464,NM_016044	chr2,chr2	-,+	TRIM43B,FAHD2A	76407,-4570
chr10:124184954-124186527	chr10	+	124185351	124186520	True	NM_001010912,NR_037506	chr10,chr10	-,+	C10orf120,MIR3941	272868,-8928
chr12:13248524-13249127	chr12	+	13248537	13249017	True	NM_001080555,NM_153823,NM_031289,NM_020853,NM_001080554	chr12,chr12,chr12,chr12,chr12	-,-,-,+,-	GSG1,GSG1,GSG1,KIAA1467,GSG1	7652,26,26,-51273,7652
chrX:149736297-149736719	chrX	+	149736433	149736658	True	NM_001184808,NM_000252	chrX,chrX	-,+	CD99L2,MTM1	330688,388
chr5:177210065-177210318	chr5	+	177210112	177210360	True	NR_003615,NM_173663	chr5,chr5	+,-	LOC728554,FAM153A	91901,-2607
chr5:177210065-177210318	chr5	-	175487730	175487978	False	NM_032361,NM_001079529	chr5,chr5	-,+	THOC3,FAM153B	-92185,23930
chr5:177210065-177210318	chr5	-	177433444	177433692	False	NM_006261,NM_001079527	chr5,chr5	-,+	PROP1,FAM153C	-10201,1996
chr1:236959189-236959896	chr1	+	236959373	236959947	True	NM_018072,NM_000254	chr1,chr1	-,+	HEATR1,MTR	-191532,-850
chr10:21806496-21806891	chr10	+	21806501	21806928	True	NM_207371,NM_001195627	chr10,chr10	-,+	C10orf140,MLLT10	7734,16172
chr4:124709216-124710840	chr4	+	124709319	124710632	True	NM_198041,NR_027106	chr4,chr4	-,+	NUDT6,LOC285419	-865196,-13958
chr17:76220964-76221879	chr17	+	76221011	76221698	True	NM_001204210,NR_002219,NM_001204211,NM_001204212	chr17,chr17,chr17,chr17	+,-,+,+	TMEM235,EPR1,TMEM235,TMEM235	5692,-228,5692,5692
chr1:54665213-54665762	chr1	+	54665285	54665809	True	NM_001031672,NM_016491	chr1,chr1	-,+	CYB5RL,MRPL37	-13,30
chr1:40043706-40044278	chr1	+	40043801	40044109	True	NM_001135653,NM_003819,NM_001135654,NM_181809	chr1,chr1,chr1,chr1	-,-,-,+	PABPC4,PABPC4,PABPC4,BMP8A	-1280,-1280,-1280,-86547
chr11:83967587-83968115	chr11	+	83967587	83968159	True	NM_182603,NM_001142700	chr11,chr11	+,-	ANKRD42,DLG2	-1062348,16226
chr6:35773143-35773462	chr6	+	35773241	35773501	True	NM_001832,NM_182548	chr6,chr6	-,+	CLPS,LHFPL5	-8139,-221
chr8:80995002-80996250	chr8	+	80995200	80996276	True	NM_001025252,NM_001105539	chr8,chr8	-,+	TPD52,ZBTB10	-2190,402171
chr22:39637122-39637669	chr22	+	39637125	39637550	True	NM_145731,NM_002608,NM_033016	chr22,chr22,chr22	+,-,-	SYNGR1,PDGFB,PDGFB	108403,3458,-211
chr19:1405727-1406328	chr19	+	1405886	1406350	True	NM_138924,NM_018959,NM_170711,NM_000156	chr19,chr19,chr19,chr19	-,+,+,-	GAMT,DAZAP1,DAZAP1,GAMT	-4334,1233,1233,-4334
chr20:32898854-32899247	chr20	+	32898974	32899294	True	NM_001672,NM_001161766,NM_000687	chr20,chr20,chr20	+,-,-	ASIP,AHCY,AHCY	-50863,364,-7759
chr12:6691406-6692349	chr12	+	6691502	6692282	True	NR_003012,NM_002046	chr12,chr12	-,+	SCARNA11,GAPDH	-727,-47896
chr17:17346549-17348140	chr17	+	17346611	17348000	True	NM_018019,NM_001199989	chr17,chr17	+,-	MED9,RASD1	32299,51762
chr16:33726254-33726985	chr17	-	36637993	36638159	False	NM_025248,NM_001199417	chr17,chr17	-,+	SRCIN1,ARHGAP23	124074,-53324
chr16:33726254-33726985	chr16	+	33726432	33726678	True	NR_033866,NM_001205265	chr16,chr16	-,+	LOC390705,TP53TG3B	-427730,-464363
chr16:33726254-33726985	chr16	-	31997392	31997638	False	NR_002827,NM_003414	chr16,chr16	-,+	HERC2P4,ZNF267	166286,-112364
chr16:33726254-33726985	chr16	-	32940935	32941181	False	NR_003083,NM_016212	chr16,chr16	-,+	SLC6A10P,TP53TG3	-44472,263798
chr19:35491992-35493832	chr19	+	35492078	35493738	True	NM_175872,NM_001136199,NM_020895	chr19,chr19,chr19	-,+,+	ZNF792,GRAMD1A,GRAMD1A	-37125,-883,-883
chr1:20307523-20308027	chr1	+	20307570	20308022	True	NM_000300,NM_001161728,NM_000929,NM_001161729,NM_001161727	chr1,chr1,chr1,chr1,chr1	-,-,+,-,-	PLA2G2A,PLA2G2A,PLA2G5,PLA2G2A,PLA2G2A	-638,-638,88678,-1418,-638
chr22:25058806-25059453	chr22	+	25059049	25059267	True	NR_024593,NR_024494	chr22,chr22	-,+	POM121L10P,BCRP3	-3935,-30218
chr1:226737283-226737537	chr1	+	226737430	226737538	True	NM_001618,NM_001003665	chr1,chr1	-,+	PARP1,C1orf95	-141629,-980
chr6:159466093-159467001	chr6	+	159466272	159467021	True	NM_054114,NM_152133,NM_138810,NM_032532	chr6,chr6,chr6,chr6	-,-,-,+	TAGAP,TAGAP,TAGAP,FNDC1	-88,-88,-88,123407
chr10:5541505-5542917	chr10	+	5542019	5542841	True	NM_017422,NM_005185	chr10,chr10	-,+	CALML5,CALML3	-486,24082
chr12:56135351-56135873	chr12	+	56135505	56135803	True	NM_001780,NM_005811	chr12,chr12	-,+	CD63,GDF11	-12595,1260
chr10:43049325-43049857	chr10	+	43049395	43049906	True	NR_026827,NR_026777	chr10,chr10	+,-	LOC84856,ZNF37BP	-78516,-1115
chr1:31538841-31539165	chr1	+	31538985	31539172	True	NM_001020658,NM_014676,NR_002762	chr1,chr1,chr1	-,-,+	PUM1,PUM1,PRO0611	-421,-421,-78124
chr6:49817992-49818994	chr6	+	49818027	49819010	True	NM_001145652,NM_001131	chr6,chr6	+,-	C6orf141,CRISP1	-299979,15258
chr6:35268011-35269690	chr6	+	35268105	35269481	True	NM_018679,NM_022047	chr6,chr6	-,+	TCP11,DEF6	-158918,-2561
chr12:56649720-56650978	chr12	+	56649891	56650961	True	NM_173595,NM_144576	chr12,chr12	-,+	ANKRD52,COQ10A	1232,9680
chr1:43804946-43806931	chr1	+	43805320	43806758	True	NM_022821,NM_005373	chr1,chr1	-,+	ELOVL1,MPL	26999,-1896
chr5:145214482-145214839	chr5	+	145214557	145214683	True	NM_205846,NM_182960,NM_138492,NM_152550	chr5,chr5,chr5,chr5	-,-,-,+	PRELID2,PRELID2,PRELID2,SH3RF2	234,234,266,101442
chr11:67218574-67218799	chr11	+	67218631	67218791	True	NM_020441,NM_145200,NM_206997,NM_001018070	chr11,chr11,chr11,chr11	-,+,-,-	CORO1B,CABP4,GPR152,CORO1B	-7648,4026,1459,-7368
chr1:29449416-29449708	chr1	+	29449551	29449751	True	NM_001003682,NM_001195001,NM_001171868	chr1,chr1,chr1	-,+,-	TMEM200B,PTPRU,TMEM200B	720,113276,-538
chr2:239140357-239140656	chr2	+	239140369	239140695	True	NR_026925,NM_001142853,NR_026926,NM_018645,NR_026923	chr2,chr2,chr2,chr2,chr2	-,-,-,-,+	LOC151174,HES6,LOC151174,HES6,LOC643387	-51,8036,-51,8036,-93
chr12:7915274-7916018	chr12	+	7915329	7916013	True	NM_203503,NM_001145465	chr12,chr12	-,+	CLEC4C,NANOGNB	-13260,1798
chr2:55743777-55744354	chr2	+	55743911	55744359	True	NM_080667,NM_018084	chr2,chr2	+,-	CCDC104,CCDC88A	2380,-96854
chr18:32112524-32113258	chr18	+	32112532	32112994	True	NM_003787,NM_032975	chr18,chr18	-,+	NOL4,DTNA	-309017,-39329
chr8:145192004-145192315	chr8	+	145192008	145192110	True	NM_030974,NM_016458	chr8,chr8	-,+	SHARPIN,FAM203A	-32868,561
chr8:145192004-145192315	chr8	+	145437216	145437318	False	NM_016458,NM_015201	chr8,chr8	+,-	FAM203A,BOP1	561,77852
chr8:28746511-28747458	chr8	+	28746632	28747422	True	NM_001172562,NM_024567,NR_026826,NM_001135726,NM_018250,NM_001145159	chr8,chr8,chr8,chr8,chr8,chr8	-,+,-,+,-,-	INTS9,HMBOX1,INTS9,HMBOX1,INTS9,INTS9	61,802,327,488,327,327
chr19:18283984-18284201	chr19	+	18283983	18284169	True	NM_002866,NM_006332	chr19,chr19	-,+	RAB3A,IFI30	30755,409
chrX:48817079-48818884	chrX	+	48817095	48818701	True	NM_004979,NM_017602,NM_001136159,NM_001136158,NM_001167992,NM_001136157	chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,+,-	KCND1,OTUD5,OTUD5,OTUD5,PQBP1,OTUD5	9600,-2202,-1447,-2202,-61372,-2202
chr12:18855383-18857350	chr12	+	18855524	18857107	True	NM_033328,NM_033123	chr12,chr12	+,-	CAPZA3,PLCZ1	33937,33862
chr10:1205940-1206309	chr10	+	1205997	1206343	True	NR_015376,NM_004508	chr10,chr10	+,-	NCRNA00200,IDI1	-340,-110936
chr4:78980531-78980832	chr4	+	78980530	78980849	True	NM_025074,NM_144571,NM_001166133	chr4,chr4,chr4	+,-,+	FRAS1,CNOT6L,FRAS1	-1857,-239986,-1857
chr7:45017839-45018234	chr7	+	45017867	45018155	True	NR_002952,NR_003697,NM_033054,NR_030770	chr7,chr7,chr7,chr7	-,-,-,+	SNORA9,C7orf40,MYO1G,CCM2	7004,8154,599,21189
chrX:134483187-134484203	chrX	+	134483193	134483905	True	NM_007131,NM_152695	chrX,chrX	-,+	ZNF75D,ZNF449	-53228,-4548
chr2:207082545-207084416	chr2	+	207082775	207084045	True	NM_001098199,NM_005279,NR_002590,NM_020923	chr2,chr2,chr2,chr2	-,-,+,+	GPR1,GPR1,SNORA41,ZDBF2	-4,-4,-55874,55477
chr14:56611646-56612810	chr14	+	56611705	56612845	True	NR_026797,NM_021255	chr14,chr14	-,+	C14orf34,PELI2	-348313,-26664
chr7:45038546-45038877	chr7	+	45038848	45038918	True	NR_003697,NR_030770,NM_031443,NM_001167935,NM_001167934	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	C7orf40,CCM2,CCM2,CCM2,CCM2	-12589,426,868,868,868
chr7:12608773-12609405	chr7	+	12609208	12609436	True	NM_001112706,NM_001135924	chr7,chr7	+,-	SCIN,VWDE	766,-165356
chr21:43101239-43101507	chr21	+	43101246	43101357	True	NR_027272,NR_024367	chr21,chr21	-,+	C21orf129,NCRNA00111	34635,-1835
chr16:85724293-85725347	chr16	+	85724331	85724796	True	NM_014615,NM_016095	chr16,chr16	+,-	KIAA0182,GINS2	-77458,-1743
chr11:57003414-57003743	chr11	+	57003603	57003787	True	NM_001005210,NM_005161,NR_027991	chr11,chr11,chr11	+,-,-	LRRC55,APLNR,APLNR	-54433,1190,1190
chr19:51669354-51670784	chr19	+	51669559	51670383	True	NR_002804,NM_145232	chr19,chr19	+,-	SIGLECP3,CTU1	201,-57912
chr2:33671518-33671930	chr2	+	33671570	33671897	True	NM_015475,NM_170672	chr2,chr2	-,+	FAM98A,RASGRP3	152524,-10212
chr8:8239290-8239717	chr8	+	8239360	8239704	True	NR_024361,NM_001080826	chr8,chr8	+,-	FLJ10661,SGK223	-153326,-103
chr2:202315060-202315923	chr2	+	202315237	202315895	True	NM_015049,NM_018571	chr2,chr2	-,+	TRAK2,STRADB	474,496
chr12:108168069-108168291	chr12	+	108168069	108168237	True	NM_012406,NM_203436	chr12,chr12	-,+	PRDM4,ASCL4	-13155,10
chr5:179158911-179159531	chr5	+	179159150	179159410	True	NM_014757,NM_001164444	chr5,chr5	+,-	MAML1,CBY3	440,-51175
chr12:6642413-6642646	chr12	+	6642467	6642643	True	NM_001039670,NM_002046	chr12,chr12	-,+	IFFO1,GAPDH	22656,1013
chr19:51372288-51373832	chr19	+	51372338	51373758	True	NR_002948,NM_005551,NM_001002231	chr19,chr19,chr19	-,+,+	KLKP1,KLK2,KLK2	25946,2930,2930
chr11:47789634-47790426	chr11	+	47789646	47790229	True	NM_001164379,NM_015308	chr11,chr11	+,-	FAM180B,FNBP4	-181472,-653
chr6:14895854-14896613	chr6	+	14896121	14896662	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	349864,766677
chr7:75157676-75157908	chr7	+	75157678	75157840	True	NM_001099435,NR_028059	chr7,chr7	+,-	SPDYE5,PMS2P3	-33430,-225
chr2:34128252-34128645	chr2	+	34128256	34128694	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-389367,-174972
chr5:127868980-127869396	chr5	+	127869013	127869427	True	NM_014031,NM_001999	chr5,chr5	+,-	SLC27A6,FBN2	431782,4370
chr17:71087987-71088414	chr17	+	71088032	71088350	True	NM_001159770,NM_139177,NM_001050	chr17,chr17,chr17	-,-,+	SLC39A11,SLC39A11,SSTR2	553,553,72809
chr5:149683497-149684649	chr5	+	149683652	149684694	True	NM_001008657,NM_001012301	chr5,chr5	+,-	TCOF1,ARSI	52507,-1127
chr1:6484901-6485231	chr1	+	6484922	6485268	True	NM_019089,NR_036218,NM_031475	chr1,chr1,chr1	-,-,+	HES2,MIR4252,ESPN	-4943,4738,-125
chr19:21209927-21211582	chr19	+	21210055	21211263	True	NM_001172671,NM_025189,NM_021269	chr19,chr19,chr19	+,+,-	ZNF430,ZNF430,ZNF708	-6687,-6687,301000
chr10:96492791-96494206	chr10	+	96492869	96494245	True	NM_000770,NM_000769	chr10,chr10	-,+	CYP2C8,CYP2C19	335063,28217
chr7:97597159-97598603	chr7	+	97597365	97598520	True	NR_002822,NM_014916	chr7,chr7	-,+	MGC72080,LMTK2	3173,137676
chr4:187679817-187680154	chr4	+	187679956	187680112	True	NM_000128,NM_005245	chr4,chr4	+,-	F11,FAT1	-492896,-34969
chr9:5185337-5185648	chr9	+	5185342	5185664	True	NM_007179,NM_002195	chr9,chr9	-,+	INSL6,INSL4	4,45754
chr10:101375287-101375691	chr10	+	101375286	101375666	True	NM_020354,NM_031212	chr10,chr10	+,-	ENTPD7,SLC25A28	43596,4605
chr19:36398155-36398378	chr19	+	36398203	36398287	True	NM_001007469,NM_003332,NM_001173514,NM_001173515,NR_033390,NM_198125,NM_139239,NM_014266	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,-,-,-,-,-,+	HCST,TYROBP,TYROBP,TYROBP,TYROBP,TYROBP,NFKBID,HCST	-4872,974,974,974,974,974,-6651,-4872
chr19:56137378-56139128	chr19	+	56137429	56139129	True	NM_001195605,NM_203374,NM_207115	chr19,chr19,chr19	+,-,+	ZNF865,ZNF784,ZNF580	-12522,-1488,13262
chr4:25513243-25513559	chr4	+	25513354	25513594	True	NM_015187,NM_013367,NM_016955	chr4,chr4,chr4	-,+,-	SEL1L3,ANAPC4,SEPSECS	351066,-134558,-351150
chrY:16162890-16163904	chrY	+	16163122	16163916	True	NM_181880,NM_004679	chrY,chrY	+,+	VCY1B,VCY	4185,4181
chrY:16162890-16163904	chrY	-	16102573	16103367	False	NM_181880,NM_004679	chrY,chrY	-,-	VCY1B,VCY	-4185,-4181
chr3:88368181-88368508	chr3	+	88368190	88368486	True	NM_173824,NM_001195308	chr3,chr3	+,-	C3orf38,CGGBP1	-169348,-169174
chr19:15752368-15752865	chr19	+	15752388	15752896	True	NM_000896,NM_001199208,NM_001199209,NR_033864	chr19,chr19,chr19,chr19	+,+,+,-	CYP4F3,CYP4F3,CYP4F3,CYP4F24P	-732,-732,-732,137952
chr1:36932501-36932725	chr1	+	36932516	36932732	True	NM_024676,NM_031280	chr1,chr1	+,-	SH3D21,MRPS15	-159859,-2476
chr1:186317514-186319034	chr1	+	186318083	186318975	True	NM_003292,NM_001164245	chr1,chr1	-,+	TPR,C1orf27	25540,25914
chr6:52699709-52701603	chr6	+	52699794	52701162	True	NM_014051,NM_153699	chr6,chr6	+,-	TMEM14A,GSTA5	-163966,9781
chr8:66933508-66934082	chr8	+	66933527	66934121	True	NM_000756,NM_033105	chr8,chr8	-,+	CRH,DNAJC5B	156775,19
chr19:59084396-59084901	chr19	+	59084584	59084930	True	NM_003422	chr19	-	MZF1	62
chr8:116679358-116679742	chr8	+	116679369	116679739	True	NM_014112,NM_032334	chr8,chr8	-,+	TRPS1,UTP23	1539,1099002
chr1:155008260-155009255	chr1	+	155008428	155009284	True	NM_152494,NM_144622,NM_001143687	chr1,chr1,chr1	+,-,+	DCST1,DCST2,DCST1	-2197,-2171,-2197
chr15:65316470-65318359	chr15	+	65316649	65318332	True	NM_178859,NM_139242	chr15,chr15	+,-	OSTBETA,MTFMT	19375,3695
chr3:11195419-11195920	chr3	+	11195473	11195828	True	NM_001098212,NR_027102	chr3,chr3	+,-	HRH1,LOC285370	385,-389596
chr11:129243454-129243771	chr11	+	129243560	129243660	True	NM_001142685,NM_003658	chr11,chr11	-,+	ARHGAP32,BARX2	-181467,2220
chr2:26861674-26862956	chr2	+	26861931	26862867	True	NM_002246,NM_001029881	chr2,chr2	+,-	KCNK3,CIB4	52713,1394
chr13:114017460-114017681	chr13	+	114017492	114017554	True	NM_024719,NM_005561	chr13,chr13	-,+	GRTP1,LAMP1	959,-66074
chr7:102119602-102119911	chr7	+	102119622	102119958	True	NM_006234,NM_152892	chr7,chr7	-,+	POLR2J,LRWD1	-241,-14283
chr7:102119602-102119911	chr7	+	44059005	44059341	False	NM_175064,NR_003655	chr7,chr7	+,-	SPDYE1,POLR2J4	-18567,-257
chr7:102119602-102119911	chr7	+	102213279	102213615	False	NM_001166339,NM_001097615	chr7,chr7	+,-	SPDYE2L,POLR2J3	-21651,-211
chr7:102119602-102119911	chr7	+	102312352	102312688	False	NM_032959,NM_001166339	chr7,chr7	-,+	POLR2J2,SPDYE2L	-170,-21631
chr7:99679634-99679922	chr7	+	99679669	99679928	True	NM_032924,NM_006833,NM_017715	chr7,chr7,chr7	-,+,-	ZNF3,COPS6,ZNF3	-298,6654,-298
chr19:9940570-9941037	chr19	+	9940615	9941059	True	NM_001048241,NM_024292,NM_006221,NM_017703	chr19,chr19,chr19,chr19	+,+,+,-	UBL5,UBL5,PIN1,FBXL12	-2098,-2098,4939,-10884
chr12:121124217-121124597	chr12	+	121124260	121124637	True	NM_014730,NM_198202	chr12,chr12	+,-	MLEC,POP5	311,-105059
chr19:11456426-11456682	chr19	+	11456558	11456711	True	NM_001170635,NM_001080503,NM_022737,NM_198536,NM_001145416,NM_033408,NM_004283	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,-,-,-,-	LPPR2,CCDC159,LPPR2,TMEM205,TMEM205,TMEM205,RAB3D	9350,469,9350,321,321,321,-6214
chr20:35271624-35272074	chr20	+	35271729	35272075	True	NM_175077,NM_032214,NR_026562	chr20,chr20,chr20	-,-,+	SLA2,SLA2,C20orf24	2533,2533,-37643
chr1:156785907-156786547	chr1	+	156785972	156786588	True	NM_003975,NM_001007792,NM_001161441,NM_001161443,NM_001161442,NM_001161444	chr1,chr1,chr1,chr1,chr1,chr1	-,+,-,-,-,-	SH2D2A,NTRK1,SH2D2A,SH2D2A,SH2D2A,SH2D2A	102,-481,102,-33,102,102
chr8:142238072-142238792	chr8	+	142238277	142238807	True	NM_014957,NM_001080431	chr8,chr8	+,-	DENND3,SLC45A4	-99608,-2
chr19:2783562-2784235	chr19	+	2783610	2784203	True	NM_003249,NM_003021	chr19,chr19	+,-	THOP1,SGTA	1302,-256
chr7:26581927-26582503	chr7	+	26582005	26582399	True	NR_022006,NM_001145531	chr7,chr7	-,+	KIAA0087,C7orf71	-3561,95090
chr18:12309877-12310344	chr18	+	12309934	12310174	True	NM_006796,NM_032525	chr18,chr18	-,+	AFG3L2,TUBB6	67151,-1736
chr3:161220144-161221318	chr3	+	161220166	161221137	True	NM_001080440,NM_001040100	chr3,chr3	+,-	OTOL1,C3orf57	-5621,-130295
chr22:25359761-25361304	chr22	+	25359919	25361162	True	NM_001145206,NM_001001663	chr22,chr22	+,-	KIAA1671,TMEM211	62778,-24605
chr19:19733238-19734420	chr19	+	19733337	19734422	True	NM_004720,NM_025245,NM_033204	chr19,chr19,chr19	-,-,+	LPAR2,PBX4,ZNF101	4667,-3898,45240
chr11:113931966-113932182	chr11	+	113932022	113932168	True	NM_020886,NM_001018011,NM_006006	chr11,chr11,chr11	-,+,+	USP28,ZBTB16,ZBTB16	-185766,-785,-1642
chr16:81041842-81042067	chr16	+	81041844	81041965	True	NM_020188,NM_001100624,NM_018455,NM_001100625	chr16,chr16,chr16,chr16	-,+,+,+	C16orf61,CENPN,CENPN,CENPN	-1342,-1799,-1799,-1799
chr18:47339765-47340417	chr18	+	47339897	47340200	True	NR_003003,NM_006111	chr18,chr18	+,-	SCARNA17,ACAA2	192,102
chr12:3072406-3072610	chr12	+	3072410	3072588	True	NM_003213,NM_202003,NM_201443,NM_201441	chr12,chr12,chr12,chr12	+,-,+,+	TEAD4,FOXM1,TEAD4,TEAD4	-3983,-86107,-3713,-3983
chr2:179317722-179318809	chr2	+	179317726	179318854	True	NM_001042702,NM_001139518,NM_001139517,NM_003690	chr2,chr2,chr2,chr2	+,-,-,-	DFNB59,PRKRA,PRKRA,PRKRA	-1615,-2371,-2242,-1768
chr3:98313237-98313735	chr3	+	98313387	98313751	True	NM_005290,NM_000097	chr3,chr3	+,-	GPR15,CPOX	-62563,-932
chr2:224804036-224806014	chr2	+	224804108	224806052	True	NM_020830,NM_022915	chr2,chr2	-,+	WDFY1,MRPL44	4050,16068
chr14:70533909-70535141	chr14	+	70533917	70534958	True	NM_022137,NM_182936	chr14,chr14	+,-	SMOC1,SLC8A3	-187854,12010
chr2:97174389-97174685	chr2	+	97174438	97174664	True	NM_212481,NR_026875	chr2,chr2	+,-	ARID5A,NEURL3	27799,-592
chr1:19187800-19188705	chr1	+	19187803	19188197	True	NM_001135254,NM_152232	chr1,chr1	+,-	PAX7,TAS1R2	-230354,-1648
chr15:59228706-59229083	chr15	+	59228771	59228933	True	NM_001013843,NM_024755,NM_017610	chr15,chr15,chr15	-,-,+	SLTM,SLTM,RNF111	-2919,-2919,50931
chr17:34760627-34762578	chr17	+	34761507	34762383	True	NM_001123392,NM_004773	chr17,chr17	-,+	TBC1D3H,ZNHIT3	-4457,80089
chr17:34760627-34762578	chr17	+	34812622	34813254	False	NM_001001418,NM_004773,NM_001040282	chr17,chr17,chr17	-,+,-	TBC1D3C,ZNHIT3,TBC1D3G	-4531,29218,-4519
chr17:34760627-34762578	chr17	-	36278626	36279258	False	NM_032258,NR_024178,NM_001123391	chr17,chr17,chr17	+,-,+	TBC1D3F,LOC284100,TBC1D3	4701,-34263,4701
chr6:18157002-18158202	chr6	+	18157435	18158044	True	NM_000367,NM_153042	chr6,chr6	-,+	TPMT,KDM1B	-2061,-1875
chr19:21688410-21688660	chr19	+	21688442	21688700	True	NM_001001415,NM_021269	chr19,chr19	+,-	ZNF429,ZNF708	-56,-176230
chr13:114057407-114057892	chr13	+	114057509	114057791	True	NM_024719,NM_017905	chr13,chr13	-,+	GRTP1,TMCO3	-39046,87516
chr12:64799689-64799946	chr12	+	64799740	64799867	True	NM_001170633,NM_007235	chr12,chr12	-,+	C12orf56,XPOT	-15395,-1642
chr5:137225099-137225425	chr5	+	137225116	137225472	True	NM_014386,NM_006805	chr5,chr5	+,-	PKD2L2,HNRNPA0	-42,-135077
chr19:45583003-45583267	chr19	+	45583068	45583260	True	NM_145288,NM_001007269,NM_024707,NM_001007270	chr19,chr19,chr19,chr19	-,+,+,+	ZNF296,GEMIN7,GEMIN7,GEMIN7	-3380,-592,-592,-604
chr2:39002944-39003697	chr2	+	39003226	39003715	True	NM_001195446,NM_024775	chr2,chr2	-,+	SRSF7,GEMIN6	-24590,1611
chr1:22261210-22262157	chr1	+	22261798	22262110	True	NM_005529,NM_007352	chr1,chr1	-,+	HSPG2,CELA3B	1690,41307
chr8:27848096-27849591	chr8	+	27848429	27849531	True	NM_173833,NM_018091	chr8,chr8	-,+	SCARA5,ELP3	888,101052
chr18:20732856-20733445	chr18	+	20733338	20733402	True	NM_138375,NM_032933	chr18,chr18	+,-	CABLES1,C18orf45	2386,284577
chr11:6947796-6948099	chr11	+	6947806	6948074	True	NM_003700,NM_013250,NM_001004684	chr11,chr11,chr11	-,+,+	OR2D2,ZNF215,OR2D3	-34075,-203,-5624
chr1:22353177-22354530	chr1	+	22353177	22354411	True	NR_023919,NR_023918,NM_005529	chr1,chr1,chr1	+,+,-	HSPC157,HSPC157,HSPG2	-1186,-1521,-89427
chr19:9293490-9293886	chr19	+	9293491	9293813	True	NM_175883,NM_001005191	chr19,chr19	+,-	OR7D2,OR7D4	2456,31784
chr12:15711346-15712665	chr12	+	15711398	15712670	True	NM_004447,NM_030671	chr12,chr12	-,+	EPS8,PTPRO	229899,-12177
chr1:197881070-197881430	chr1	+	197881138	197881418	True	NM_001014434,NM_001195216,NM_001024594,NM_020204	chr1,chr1,chr1,chr1	+,-,+,+	LHX9,DENND1B,C1orf53,LHX9	216,-136515,-9507,5098
chr4:1342117-1342392	chr4	+	1342206	1342372	True	NM_001328,NM_020894	chr4,chr4	-,+	CTBP1,KIAA1530	-99298,-1153
chr11:60681610-60681880	chr11	+	60681612	60681746	True	NM_014502,NM_024092	chr11,chr11	-,+	PRPF19,TMEM109	-7551,-292
chr1:47901073-47901553	chr1	+	47901264	47901552	True	NR_026878,NM_004474	chr1,chr1	-,+	MGC12982,FOXD2	-951,136
chr1:112015558-112016295	chr1	+	112015833	112016114	True	NM_024102,NM_174896	chr1,chr1	-,+	WDR77,C1orf162	-24003,489
chr15:31396421-31396721	chr15	+	31396598	31396760	True	NM_014967,NM_002420	chr15,chr15	+,-	FAN1,TRPM1	-200573,-2674
chr9:94124453-94125019	chr9	+	94124480	94124919	True	NM_001698,NR_037472	chr9,chr9	-,+	AUH,MIR3910-1	-274,273613
chr1:6294848-6295103	chr1	+	6294894	6295150	True	NM_012405,NM_001024598	chr1,chr1	-,+	ICMT,HES3	944,9101
chr17:1466333-1466588	chr17	+	1466332	1466404	True	NM_006224,NR_028514	chr17,chr17	-,+	PITPNA,LOC100306951	-222,-46170
chr3:49451889-49452385	chr3	+	49452013	49452295	True	NR_028435,NM_022171,NM_000481,NM_001164712,NM_001664,NM_001164710,NM_001164711	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-,-	AMT,TCTA,AMT,AMT,RHOA,AMT,AMT	7866,-2425,7866,7866,-2487,7866,7866
chr9:96340294-96340606	chr9	+	96340306	96340640	True	NM_198841,NM_005392	chr9,chr9	-,+	FAM120AOS,PHF2	-124432,-1448
chr19:35627957-35628621	chr19	+	35627985	35628497	True	NM_005031,NM_021902,NM_139284,NM_022006	chr19,chr19,chr19,chr19	+,+,-,+	FXYD1,FXYD1,LGI4,FXYD7	1894,1234,-1807,5656
chr2:176947282-176947653	chr2	+	176947403	176947687	True	NM_001080458,NM_000523	chr2,chr2	-,+	EVX2,HOXD13	1053,9844
chr6:42981116-42981364	chr6	+	42981130	42981376	True	NM_014623,NM_033112,NM_057161	chr6,chr6,chr6	-,+,+	MEA1,RRP36,KLHDC3	292,8008,600
chr16:59788998-59789866	chr16	+	59789044	59789433	True	NR_028471,NM_024860	chr16,chr16	-,+	LOC644649,SETD6	51,-1239712
chr16:4851632-4851944	chr16	+	4851748	4851984	True	NM_024589,NR_029455	chr16,chr16	-,+	ROGDI,LOC440335	740,-6420
chr22:24032491-24032740	chr22	+	24032516	24032780	True	NM_153615,NR_024448	chr22,chr22	+,-	RGL4,LOC91316	267,26880
chr5:177099559-177100430	chr5	+	177099667	177100368	True	NR_026921,NM_007255	chr5,chr5	-,+	LOC202181,B4GALT7	-389,-72600
chr5:177099559-177100430	chr5	-	175664294	175664994	False	NR_036494,NM_198567	chr5,chr5	-,+	LOC643201,C5orf25	-37996,375
chr19:10680280-10680536	chr19	+	10680335	10680409	True	NM_079421,NM_023008,NR_031603,NM_001800	chr19,chr19,chr19,chr19	-,-,+,-	CDKN2D,KRI1,MIR1238,CDKN2D	-680,-3633,-17588,-704
chr7:101997778-101998427	chr7	+	101998384	101998476	True	NM_024653,NM_001146210	chr7,chr7	+,-	PRKRIP1,SPDYE6	38327,-1495
chr7:101997778-101998427	chr7	-	66741694	66741744	False	NM_022906,NR_022007	chr7,chr7	+,-	STAG3L4,PMS2P4	25871,25712
chr7:101997778-101998427	chr7	+	72344043	72344123	False	NR_003666,NM_172020	chr7,chr7	-,+	SPDYE7P,POM121	-4388,5812
chr7:101997778-101998427	chr7	+	76172797	76172859	False	NR_029411,NR_003262	chr7,chr7	+,-	LOC100133091,FDPSL2A	5798,-68480
chr7:101997778-101998427	chr7	-	75121334	75121414	False	NM_001099415,NM_001099435	chr7,chr7	-,+	POM121C,SPDYE5	-5766,2884
chr4:174449825-174450148	chr4	+	174449899	174450149	True	NM_021973,NR_003679	chr4,chr4	-,+	HAND2,NBLA00301	1279,1459
chr6:44089910-44090311	chr6	+	44090118	44090349	True	NM_018426,NM_032111	chr6,chr6	+,-	TMEM63B,MRPL14	5026,4893
chr19:51670904-51671374	chr19	+	51670915	51671399	True	NR_002804,NM_145232	chr19,chr19	+,-	SIGLECP3,CTU1	-381,-59268
chr6:7724899-7725840	chr6	+	7724899	7725736	True	NM_001145549,NM_001718	chr6,chr6	-,+	TXNDC5,BMP6	184631,1274
chr5:176318428-176319404	chr5	+	176318821	176319345	True	NM_133369,NM_002115	chr5,chr5	+,-	UNC5A,HK3	-81312,7038
chr16:67064661-67065572	chr16	+	67064810	67065371	True	NR_024525,NM_001755,NM_022845	chr16,chr16,chr16	-,+,+	FAM96B,CBFB,CBFB	-96490,-1812,-1812
chr9:34592206-34593177	chr9	+	34592305	34593031	True	NR_024369,NM_001842,NM_147164	chr9,chr9,chr9	+,-,-	LOC415056,CNTFR,CNTFR	-24346,-2583,-2583
chr22:35936993-35937204	chr22	+	35937035	35937109	True	NM_005368,NM_014310	chr22,chr22	-,+	MB,RASD2	76325,242
chr3:51910587-51910860	chr3	+	51910628	51910895	True	NM_001145059,NM_203424	chr3,chr3	-,+	IQCF5,IQCF2	-1028,-15034
chr1:184005721-184005988	chr1	+	184005769	184005835	True	NM_015101,NM_001127394	chr1,chr1	-,+	GLT25D2,TSEN15	1078,14975
chr19:14378213-14378945	chr19	+	14378240	14378709	True	NM_014921,NM_001025160	chr19,chr19	-,+	LPHN1,CD97	-61243,113503
chrX:48369978-48370765	chrX	+	48370001	48370559	True	NM_033518,NM_203475,NM_203474,NM_022825,NM_203473,NM_006579	chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,+	SLC38A5,PORCN,PORCN,PORCN,PORCN,EBP	-41357,-1880,-1880,-2681,-2681,9604
chr1:150225712-150226312	chr1	+	150225728	150225896	True	NM_012113,NM_001077628	chr1,chr1	+,-	CA14,APH1A	4321,15686
chr3:125560475-125561104	chr3	+	125560643	125560838	True	NR_024250,NR_031687	chr3,chr3	+,-	LOC100125556,MIR548I1	74605,-51248
chr22:35543648-35545508	chr22	+	35543739	35545315	True	NM_001008494,NM_005368	chr22,chr22	+,-	ISX,MB	-81667,468119
chr12:91563763-91564495	chr12	+	91563951	91564522	True	NR_027932,NM_133507,NM_133506,NM_133505,NM_133504,NM_133503	chr12,chr12,chr12,chr12,chr12,chr12	+,-,-,-,-,-	CLLU1,DCN,DCN,DCN,DCN,DCN	1250784,7858,7858,7858,7858,8888
chr5:72263035-72263537	chr5	+	72263120	72263400	True	NM_138782,NM_152625	chr5,chr5	+,-	FCHO2,ZNF366	-11368,-459871
chr11:3254369-3256336	chr11	+	3254779	3256241	True	NR_027138,NM_001039165	chr11,chr11	+,-	C11orf36,MRGPRE	-15268,-1163
chr16:66835911-66836258	chr16	+	66836050	66836268	True	NM_005182,NM_001136505	chr16,chr16	+,-	CA7,CCDC79	42013,-527
chr8:75894691-75896527	chr8	+	75894740	75896455	True	NM_031461,NM_020647	chr8,chr8	+,-	CRISPLD1,JPH1	252,-661178
chrX:138615866-138617344	chrX	+	138615921	138617079	True	NM_000133,NM_001171877	chrX,chrX	+,-	F9,MCF2	-3077,107971
chr19:58621490-58622457	chr19	+	58621536	58622259	True	NM_001145542,NM_007134,NR_027135	chr19,chr19,chr19	-,+,-	ZSCAN18,ZNF135,ZSCAN18	7597,-50980,7597
chr14:23776243-23776480	chr14	+	23776248	23776506	True	NM_001199864,NM_001199839,NM_004050,NR_026862	chr14,chr14,chr14,chr14	+,+,+,-	BCL2L2-PABPN1,BCL2L2,BCL2L2,PPP1R3E	-328,-230,-328,-4191
chr11:120111490-120111706	chr11	+	120111489	120111735	True	NM_014352,NM_012101	chr11,chr11	+,-	POU2F3,TRIM29	-589,-102626
chr16:2004140-2004753	chr16	+	2004184	2004660	True	NR_002326,NR_002327,NM_004548,NM_005061	chr16,chr16,chr16,chr16	-,-,+,-	SNORA64,SNORA10,NDUFB10,RPL3L	8497,7857,4856,69
chr11:27527912-27528143	chr11	+	27527915	27528111	True	NR_033312,NR_033313,NR_033314,NR_033315,NR_002832,NM_018362	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,-	BDNF-AS1,BDNF-AS1,BDNF-AS1,BDNF-AS1,BDNF-AS1,LIN7C	287,287,287,287,287,265
chr10:116411158-116411623	chr10	+	116411229	116411556	True	NM_020940,NM_002313	chr10,chr10	+,-	FAM160B1,ABLIM1	169946,6552
chr4:100207101-100208050	chr4	+	100207378	100207989	True	NM_000667,NR_037884	chr4,chr4	-,+	ADH1A,LOC100507053	4247,-197428
chr19:10228961-10229287	chr19	+	10229268	10229328	True	NM_002566,NM_003755,NR_003688	chr19,chr19,chr19	+,-,+	P2RY11,EIF3G,SNORD105B	-7122,1321,-8894
chr6:151188650-151189092	chr6	+	151188748	151188899	True	NM_020861,NM_015440	chr6,chr6	-,+	ZBTB2,MTHFD1L	523835,-2109
chr4:25531030-25531795	chr4	+	25531031	25531834	True	NM_015187,NM_001177998	chr4,chr4	-,+	SEL1L3,SLC34A2	332826,125600
chr20:25603486-25603791	chr20	+	25603490	25603750	True	NM_021067,NM_152667	chr20,chr20	+,-	GINS1,NANP	-215218,956
chr20:2448332-2449291	chr20	+	2448345	2449193	True	NR_003684,NM_003091,NM_080751,NM_198216	chr20,chr20,chr20,chr20	-,-,+,-	SNORD119,SNRPB,TMC2,SNRPB	-4652,2356,68059,2356
chr20:56885124-56887102	chr20	+	56885380	56886934	True	NR_003505,NM_020673	chr20,chr20	-,+	PPP4R1L,RAB22A	-885,-662
chr12:94847110-94847594	chr12	+	94847109	94847595	True	NM_001042399,NM_016122,NR_027035	chr12,chr12,chr12	-,-,+	CCDC41,CCDC41,LOC144486	6219,6219,6183
chr9:131710793-131711095	chr9	+	131710798	131710930	True	NM_015354,NM_014908	chr9,chr9	+,-	NUP188,DOLK	-872,-786
chr1:29213227-29213437	chr1	+	29213302	29213392	True	NM_004437,NM_203343,NM_203342,NM_001171868,NM_001166005,NM_001166007	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,-,+,+	EPB41,EPB41,EPB41,TMEM200B,EPB41,EPB41	210,210,210,235671,210,210
chr8:96032875-96034537	chr8	+	96032999	96034252	True	NR_037484,NM_152416	chr8,chr8	-,+	MIR3150B,C8orf38	51035,2968
chr21:42223496-42224055	chr21	+	42223513	42224097	True	NM_001389,NR_036167	chr21,chr21	-,+	DSCAM,MIR3197	-4474,315386
chr5:168010655-168011845	chr5	+	168010854	168011475	True	NM_024594,NR_031721	chr5,chr5	-,+	PANK3,MIR103-1AS	-4240,-22999
chr11:128763506-128765071	chr11	+	128763878	128764884	True	NM_000890,NM_145013	chr11,chr11	+,-	KCNJ5,C11orf45	-2616,10758
chr5:38575967-38577522	chr5	+	38575991	38577356	True	NR_037423,NM_002310,NM_182801	chr5,chr5,chr5	-,-,+	MIR3650,LIFR,EGFLAM	-18328,18208,-130406
chr2:100103622-100105280	chr2	+	100103697	100105296	True	NM_015904,NM_001037872,NM_016316	chr2,chr2,chr2	+,-,-	EIF5B,REV1,REV1	-149914,1234,1234
chr12:56048992-56049200	chr12	+	56048992	56049120	True	NM_001144996,NM_206899	chr12,chr12	-,+	ITGA7,OR10P1	52620,-18367
chr15:68718239-68719781	chr15	+	68718330	68719824	True	NM_015322,NM_001004439	chr15,chr15	+,-	FEM1B,ITGA11	-148240,4718
chr18:53612489-53613976	chr18	+	53612623	53613674	True	NM_003199,NM_015285	chr18,chr18	-,+	TCF4,WDR7	-356763,704941
chr7:139044491-139044763	chr7	+	139044509	139044799	True	NM_016019,NR_033999	chr7,chr7	+,-	LUC7L2,LOC100129148	-26,67523
chr2:233923565-233923991	chr2	+	233923632	233923870	True	NM_001017915,NM_005541,NM_019850	chr2,chr2,chr2	+,+,-	INPP5D,INPP5D,NGEF	1165,1165,-45681
chr6:105582288-105584222	chr6	+	105582842	105584083	True	NM_007073,NR_037157,NM_001199563,NM_147147	chr6,chr6,chr6,chr6	-,+,-,-	BVES,C6orf112,BVES,BVES	512,1478,1018,190
chr5:180652055-180653195	chr5	+	180652074	180653076	True	NR_002592,NM_033549,NM_201627	chr5,chr5,chr5	-,+,+	SNORD96A,TRIM41,TRIM41	15863,-1819,-1819
chr20:280299-281115	chr20	+	280335	281145	True	NM_033089,NM_153269	chr20,chr20	+,-	ZCCHC3,C20orf96	-2182,-8945
chr16:28997747-28998095	chr16	+	28997853	28998049	True	NM_001014987,NM_024816,NM_014387,NM_001014989,NM_001014988	chr16,chr16,chr16,chr16,chr16	+,-,+,+,+	LAT,RABEP2,LAT,LAT,LAT	-1517,-61321,-1517,-1757,-1517
chr14:38678128-38678367	chr14	+	38678128	38678337	True	NM_001049,NM_175060	chr14,chr14	+,-	SSTR1,CLEC14A	-975,47287
chr5:156693566-156694083	chr5	+	156693774	156694100	True	NM_001037333,NM_001037332,NM_001001343,NM_014376	chr5,chr5,chr5,chr5	+,+,-,+	CYFIP2,CYFIP2,FNDC9,CYFIP2	-734,-638,78679,2261
chr9:130699121-130699466	chr9	+	130699199	130699509	True	NM_001135219,NM_173492,NM_003863,NM_001006641	chr9,chr9,chr9,chr9	-,-,-,+	PIP5KL1,PIP5KL1,DPM2,SLC25A25	-6123,-9429,1304,130969
chr16:70488909-70489514	chr16	+	70488911	70489467	True	NM_145059,NM_006927	chr16,chr16	+,-	FUK,ST3GAL2	-464,-15920
chr11:830839-831059	chr11	+	830852	831044	True	NM_001039490,NM_021128,NM_173584,NM_139030,NM_004357,NM_139029	chr11,chr11,chr11,chr11,chr11,chr11	+,-,+,+,+,+	CD151,POLR2L,EFCAB4A,CD151,CD151,CD151	1907,11535,-3318,1907,1907,1907
chr3:167018488-167019667	chr3	+	167019010	167019246	True	NM_001122752,NM_001199202	chr3,chr3	+,-	SERPINI1,ZBBX	434185,78875
chr1:89352760-89352978	chr1	+	89352930	89353020	True	NM_006256,NM_001514	chr1,chr1	+,-	PKN2,GTF2B	-203060,4331
chr12:54330403-54330729	chr12	+	54330533	54330745	True	NM_017410,NR_003716	chr12,chr12	+,-	HOXC13,HOTAIR	1830,31820
chr3:113418036-113418317	chr3	+	113418087	113418239	True	NM_001690,NM_001009899	chr3,chr3	+,-	ATP6V1A,KIAA2018	47626,-2594
chr16:85621538-85622114	chr16	+	85621568	85622060	True	NM_001134473,NM_016095	chr16,chr16	+,-	KIAA0182,GINS2	22968,100578
chr7:51382707-51383334	chr7	+	51382773	51383330	True	NM_015198,NR_033845	chr7,chr7	-,+	COBL,LOC100129427	1235,-783375
chr1:17249114-17249581	chr1	+	17249349	17249525	True	NM_014675,NM_001135248	chr1,chr1	+,-	CROCC,MFAP2	-955,57698
chr4:75031366-75032856	chr4	+	75031460	75032833	True	NM_002089,NM_001144978	chr4,chr4	-,+	CXCL2,MTHFD2L	-66463,-7692
chr2:10590328-10590665	chr2	+	10590433	10590553	True	NM_002539,NM_134421,NR_028374	chr2,chr2,chr2	-,+,-	ODC1,HPCAL1,SNORA80B	-1980,-146658,-3458
chr10:114207451-114207715	chr10	+	114207452	114207722	True	NM_022494,NM_145206	chr10,chr10	-,+	ZDHHC6,VTI1A	-780,-750
chr16:29937657-29937926	chr16	+	29937666	29937922	True	NM_178863,NM_181718	chr16,chr16	-,+	KCTD13,ASPHD1	-121,-25570
chr1:205199699-205200283	chr1	+	205199705	205200317	True	NM_014858,NM_199462	chr1,chr1	+,-	TMCC2,DSTYK	-2718,-18978
chr14:57509825-57511700	chr14	+	57509911	57511740	True	NM_018229,NM_006544	chr14,chr14	+,-	MUDENG,EXOC5	223865,223927
chr3:45432899-45433123	chr3	+	45432930	45433161	True	NM_015444,NM_015340	chr3,chr3	-,+	TMEM158,LARS2	-165116,-2906
chrX:153666924-153667945	chrX	+	153666991	153667635	True	NM_001009934,NM_004699,NM_001493	chrX,chrX,chrX	-,+,+	DNASE1L1,FAM50A,GDI1	-26564,4849,-1783
chr1:26699971-26701341	chr1	+	26700179	26701077	True	NM_001114759,NM_024674,NM_173574	chr1,chr1,chr1	-,+,-	ZNF683,LIN28A,ZNF683	-913,36191,-913
chr3:152881524-152882102	chr3	+	152881574	152882149	True	NM_002886,NM_001123228	chr3,chr3	+,-	RAP2B,TMEM14E	-1596,-822795
chr6:53659051-53659275	chr6	+	53659107	53659245	True	NM_018214,NM_001003760	chr6,chr6	+,-	LRRC1,KLHL31	532,-128601
chr2:30143555-30144046	chr2	+	30143596	30144030	True	NM_004304,NM_001127399	chr2,chr2	-,+	ALK,YPEL5	497,225719
chr5:6586204-6586809	chr5	+	6586413	6586798	True	NR_024424,NR_024423,NM_001193455	chr5,chr5,chr5	+,+,-	LOC255167,LOC255167,NSUN2	-3054,-4177,46726
chr17:42909783-42910642	chr17	+	42909951	42910599	True	NM_016438,NM_001080383,NM_005497	chr17,chr17,chr17	+,-,-	HIGD1B,GJC1,GJC1	14679,-1772,-2344
chr19:56090429-56090668	chr19	+	56090476	56090684	True	NM_153219,NM_152600	chr19,chr19	+,-	ZNF524,ZNF579	21045,1577
chr3:52738329-52739035	chr3	+	52738608	52739012	True	NM_001010983,NM_152932,NM_014041,NM_018446	chr3,chr3,chr3,chr3	-,-,+,-	GLT8D1,GLT8D1,SPCS1,GLT8D1	1086,-986,844,1086
chr17:80233498-80233892	chr17	+	80233526	80233597	True	NM_001893,NM_001042423,NM_139062	chr17,chr17,chr17	-,+,-	CSNK1D,SLC16A3,CSNK1D	-1932,-43433,-1932
chr1:42384156-42384388	chr1	+	42384245	42384429	True	NM_024503,NM_007102,NM_001127714	chr1,chr1,chr1	-,+,-	HIVEP3,GUCA2B,HIVEP3	117,234662,117
chr1:225156573-225157361	chr1	+	225156604	225157008	True	NM_144989,NM_002296	chr1,chr1	+,-	DNAH14,LBR	-39292,458857
chr19:15730128-15732071	chr19	+	15730294	15732006	True	NM_007253,NM_052890	chr19,chr19	+,-	CYP4F8,PGLYRP2	-4316,-139979
chr1:43422960-43423536	chr1	+	43422985	43423406	True	NR_033967,NM_006516	chr1,chr1	+,-	FLJ32224,SLC2A1	1313,1491
chr8:67342717-67343002	chr8	+	67342758	67343032	True	NM_001080416,NM_015169,NM_144650	chr8,chr8,chr8	-,+,+	MYBL1,RRS1,ADHFE1	182502,-1553,1685
chr6:146285474-146285870	chr6	+	146285535	146285733	True	NM_001042683,NM_173082,NM_000838	chr6,chr6,chr6	-,-,+	SHPRH,SHPRH,GRM1	-302,-302,63048
chr5:2752847-2753333	chr5	+	2752846	2753382	True	NM_178569,NM_001134222,NM_033267	chr5,chr5,chr5	+,-,-	C5orf38,IRX2,IRX2	-635,-1077,-1077
chr3:142148283-142149457	chr3	+	142148282	142149241	True	NM_001145319,NM_001042604	chr3,chr3	+,-	PLS1,XRN1	165987,17665
chr2:68957636-68959049	chr2	+	68957796	68959025	True	NM_001007231,NM_001166277,NM_014482	chr2,chr2,chr2	+,+,-	ARHGAP25,ARHGAP25,BMP10	2887,2887,139679
chr6:24722936-24723941	chr6	+	24722936	24723556	True	NM_030939,NM_015895	chr6,chr6	-,+	C6orf62,GMNN	-3533,51607
chr2:118857450-118858162	chr2	+	118857505	118857908	True	NM_019044,NM_016133	chr2,chr2	-,+	CCDC93,INSIG2	-85766,-11506
chr20:46417718-46418022	chr20	+	46417838	46418062	True	NM_018837,NM_198596,NM_181659,NM_001161841	chr20,chr20,chr20,chr20	-,-,+,-	SULF2,SULF2,NCOA3,SULF2	-3030,-2478,-287289,-2478
chr10:48437894-48438430	chr10	+	48437911	48438477	True	NM_004962,NM_153034	chr10,chr10	-,+	GDF10,ZNF488	711,-82873
chr10:15138203-15138449	chr10	+	15138342	15138430	True	NM_183005,NM_001097590,NM_006414,NM_001039844,NM_153244	chr10,chr10,chr10,chr10,chr10	+,+,+,-,-	RPP38,RPP38,RPP38,ACBD7,C10orf111	751,751,751,-7567,938
chr11:416027-416266	chr11	+	416027	416315	True	NM_001135053,NM_007183,NM_021805,NM_001135054	chr11,chr11,chr11,chr11	-,+,-,-	SIGIRR,PKP3,SIGIRR,SIGIRR	1132,-21861,1132,-1028
chr15:89078841-89079730	chr15	+	89079255	89079593	True	NM_001144074,NM_176805	chr15,chr15	-,+	DET1,MRPS11	10369,-68628
chr4:81188469-81189502	chr4	+	81188530	81189462	True	NM_001145794,NM_004464,NM_033143	chr4,chr4,chr4	-,+,+	ANTXR2,FGF5,FGF5	-194053,-839,-839
chr19:12865179-12865489	chr19	+	12865221	12865537	True	NM_024038,NM_017682	chr19,chr19	-,+	C19orf43,BEST2	-19692,-1865
chr9:37650928-37651147	chr9	+	37650962	37651088	True	NM_014907,NM_001134485	chr9,chr9	+,-	FRMPD1,TOMM5	-23,-58326
chr11:96076292-96076496	chr11	+	96076292	96076498	True	NR_036125,NM_032427	chr11,chr11	+,-	MIR1260B,MAML2	-1741,46
chr5:141338042-141339891	chr5	+	141338246	141339604	True	NM_183399,NM_183398,NM_001201365,NM_016580,NM_183401,NM_183400,NM_004290	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,-,+,+,+	RNF14,RNF14,RNF14,PCDH12,RNF14,RNF14,RNF14	6797,8846,6797,167,9107,8846,8846
chr17:26699872-26700167	chr17	+	26699871	26700147	True	NM_001080837,NM_000638,NM_015077	chr17,chr17,chr17	-,-,+	SEBOX,VTN,SARM1	-7606,-2498,-935
chrX:118717220-118718614	chrX	+	118717515	118718258	True	NM_181762,NM_003336,NM_001173488,NM_181777	chrX,chrX,chrX,chrX	+,+,-,+	UBE2A,UBE2A,NKRF,UBE2A	-9079,-9079,8910,-3280
chrX:152737254-152737606	chrX	+	152737294	152737647	True	NM_017518,NM_001711	chrX,chrX	-,+	HAUS7,BGN	-691,22699
chr6:37137073-37137337	chr6	+	37137127	37137317	True	NM_145316,NM_002648	chr6,chr6	-,+	TMEM217,PIM1	88146,604
chr1:22325979-22326321	chr1	+	22326107	22326337	True	NM_005529,NM_005747	chr1,chr1	-,+	HSPG2,CELA3A	-62357,1811
chr1:22325979-22326321	chr1	+	22301223	22301411	False	NM_005529,NM_007352	chr1,chr1	-,+	HSPG2,CELA3B	-37473,2006
chr3:138664139-138664370	chr3	+	138664138	138664302	True	NM_001040061,NM_023067	chr3,chr3	+,-	C3orf72,FOXL2	1773,1730
chr6:111367337-111369264	chr6	+	111367340	111368799	True	NM_018593,NR_002932	chr6,chr6	+,-	SLC16A10,GSTM2P1	39981,11
chr19:49892733-49893322	chr19	+	49892819	49893321	True	NM_144688,NM_003598	chr19,chr19	+,-	CCDC155,TEAD2	-1395,-27105
chr2:107101087-107102906	chr2	+	107101087	107102739	True	NM_001144013,NR_003506	chr2,chr2	-,+	RGPD3,PLGLA	-16286,-98374
chr2:107101087-107102906	chr2	-	87090764	87091332	False	NR_037931,NM_172101,NM_172102,NM_001178100,NM_172213,NM_004931	chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-	LOC100286979,CD8B,CD8B,CD8B,CD8B,CD8B	-1867,-1717,-1717,-1717,-1717,-1717
chr12:77165801-77166618	chr12	+	77165801	77166233	True	NM_001321,NM_015336	chr12,chr12	-,+	CSRP2,ZDHHC17	106623,-8007
chr4:77363855-77365235	chr4	+	77363894	77364899	True	NM_001042784,NM_020859	chr4,chr4	-,+	CCDC158,SHROOM3	-35436,-7695
chr6:148660974-148661223	chr6	+	148660977	148661209	True	NR_034115,NM_015278	chr6,chr6	-,+	LOC729178,SASH1	-1135227,2519
chr17:8152204-8152517	chr17	+	8152250	8152482	True	NM_025099,NM_012393	chr17,chr17	-,+	CTC1,PFAS	-837,113
chr11:128775074-128775346	chr11	+	128775298	128775366	True	NM_000890,NM_145013	chr11,chr11	+,-	KCNJ5,C11orf45	-14036,276
chr17:59484386-59485535	chr17	+	59484454	59485404	True	NM_199290,NM_005994,NM_203425	chr17,chr17,chr17	-,+,+	NACA2,TBX2,C17orf82	183209,-7248,3707
chrX:13353183-13354077	chrX	+	13353345	13354113	True	NM_001167890,NM_001135995	chrX,chrX	+,-	EGFL6,ATXN3L	233580,-14827
chr16:33945487-33947408	chr16	+	33945734	33946178	True	NR_027080,NR_002837	chr16,chr16	+,-	LOC283914,UBE2MP1	651608,458640
chr17:68173296-68175058	chr17	+	68173470	68175076	True	NR_036534,NM_000891	chr17,chr17	-,+	FLJ36644,KCNJ2	-7927,-7846
chr11:93412113-93413131	chr11	+	93412391	93413166	True	NM_033395,NR_003028	chr11,chr11	+,-	KIAA1731,SNORA25	-17635,50703
chr15:48937757-48938054	chr15	+	48937758	48937988	True	NM_014335,NM_000138	chr15,chr15	+,-	EID1,FBN1	232301,47
chr6:14804392-14804992	chr6	+	14804420	14804902	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	441624,858437
chr12:30910777-30912760	chr12	+	30911243	30912128	True	NM_023925,NM_001002259,NM_032156,NM_001080509	chr12,chr12,chr12,chr12	-,-,-,+	CAPRIN2,CAPRIN2,CAPRIN2,TSPAN11	-3795,-3795,-3795,167709
chr17:63100259-63101446	chr17	+	63100387	63101233	True	NM_006572,NM_001165933	chr17,chr17	-,+	GNA13,RGS9	-47467,32222
chr2:204589200-204589866	chr2	+	204589401	204589742	True	NM_006139,NM_203365	chr2,chr2	+,-	CD28,RAPH1	-18264,-189343
chr16:79828531-79830050	chr16	+	79828674	79830012	True	NM_005360,NM_130897	chr16,chr16	-,+	MAF,DYNLRB2	-194052,744841
chr1:150460804-150462685	chr1	+	150460875	150462476	True	NM_025150,NM_001197320	chr1,chr1	+,-	TARS2,MCL1	-1013,89789
chr10:50506694-50506910	chr10	+	50506694	50506908	True	NM_001080520,NM_199459,NM_001135196	chr10,chr10,chr10	-,+,+	DRGX,C10orf71,C10orf71	93049,278,278
chrX:49030561-49031034	chrX	+	49030605	49030935	True	NM_002668,NM_006150	chrX,chrX	+,-	PLP2,PRICKLE3	-2474,11895
chr18:30993899-30995285	chr18	+	30993899	30994233	True	NM_030632,NM_001105528	chr18,chr18	+,-	ASXL3,C18orf34	164307,25869
chr9:135959656-135960076	chr9	+	135959783	135960023	True	NR_001275,NM_006266	chr9,chr9	+,-	CELP,RALGDS	-1908,36588
chr9:135959656-135960076	chr9	+	135944061	135944239	False	NM_001807,NM_006266	chr9,chr9	+,-	CEL,RALGDS	-6747,52372
chr11:61190521-61192149	chr11	+	61191111	61191928	True	NM_001136040,NM_001142565,NM_017841,NM_024811	chr11,chr11,chr11,chr11	-,-,+,-	CPSF7,CPSF7,SDHAF2,CPSF7	5599,5599,5668,5518
chr22:27143242-27144372	chr22	+	27143279	27144161	True	NR_033321,NM_001887	chr22,chr22	+,-	MIAT,CRYBB1	-89896,-129288
chr8:49648949-49649747	chr8	+	49648954	49649782	True	NM_001007176,NR_024605,NM_024593,NM_001142857	chr8,chr8,chr8,chr8	+,-,-,-	C8orf22,EFCAB1,EFCAB1,EFCAB1	335120,-1084,-1084,-1084
chr2:168789944-168790961	chr2	+	168789947	168790655	True	NM_020981,NM_013233	chr2,chr2	+,-	B3GALT1,STK39	-114816,313500
chr17:49241337-49241727	chr17	+	49241467	49241536	True	NM_001198682,NM_002512,NM_003971,NM_001018137,NM_001018138,NM_001018139	chr17,chr17,chr17,chr17,chr17,chr17	+,+,-,+,+,+	NME2,NME2,SPAG9,NME2,NME2,NME2	2096,2096,-43241,1259,2546,2325
chr8:104847594-104848543	chr8	+	104847696	104848448	True	NM_014677,NM_030780	chr8,chr8	+,-	RIMS2,SLC25A32	-16338,-420228
chr22:17681007-17681504	chr22	+	17681126	17681502	True	NM_177405,NM_017424,NR_024483	chr22,chr22,chr22	-,-,+	CECR1,CECR1,CECR4	-581,9329,-40898
chr19:35423971-35424279	chr19	+	35423970	35424050	True	NM_001099438,NM_175872,NR_024018,NM_194325,NM_001099437	chr19,chr19,chr19,chr19,chr19	+,-,+,+,+	ZNF30,ZNF792,ZNF30,ZNF30,ZNF30	-6219,30963,-6219,-6219,-6219
chr3:51929154-51929747	chr3	+	51929185	51929688	True	NM_152397,NM_203424	chr3,chr3	-,+	IQCF1,IQCF2	7748,-33591
chr12:122658309-122658678	chr12	+	122658313	122658709	True	NM_001014336,NM_152759,NM_001098519	chr12,chr12,chr12	-,+,+	IL31,LRRC43,LRRC43	87,-6103,8957
chr6:17393561-17393810	chr6	+	17393562	17393834	True	NM_006366,NM_005124	chr6,chr6	+,-	CAP2,NUP153	91,313034
chr2:33817554-33818190	chr2	+	33817761	33818191	True	NM_015475,NM_015376	chr2,chr2	-,+	FAM98A,RASGRP3	6221,-78875
chr17:4643962-4644274	chr17	+	4643999	4644287	True	NM_001100812,NM_001001683,NM_032265,NM_022059,NM_001136046	chr17,chr17,chr17,chr17,chr17	-,+,+,-,+	CXCL16,MED11,ZMYND15,CXCL16,ZMYND15	-776,-9327,-713,-776,-731
chr6:26501034-26501424	chr6	+	26501180	26501450	True	NM_001732,NM_024639	chr6,chr6	+,-	BTN1A1,ZNF322A	44,158563
chr21:42802364-42803687	chr21	+	42802402	42802915	True	NM_002462,NM_001135099,NM_001178046,NM_001144925	chr21,chr21,chr21,chr21	+,-,+,+	MX1,TMPRSS2,MX1,MX1	-4475,77132,-4350,-9933
chr15:41694749-41695136	chr15	+	41694811	41694931	True	NM_016013,NM_015138	chr15,chr15	-,+	NDUFAF1,RTF1	-169,14370
chr10:73639396-73640481	chr10	+	73640112	73640530	True	NM_001171936,NM_002778	chr10,chr10	+,-	CDH23,PSAP	-68525,-29030
chr3:27672032-27673348	chr3	+	27672074	27673265	True	NM_005442,NM_182523	chr3,chr3	-,+	EOMES,CMC1	90577,609858
chr22:26984740-26984976	chr22	+	26984744	26984974	True	NM_003595,NM_001886	chr22,chr22	-,+	TPST2,CRYBA4	1165,32953
chr4:15701516-15703514	chr4	+	15701563	15703563	True	NM_004334,NR_036464	chr4,chr4	+,-	BST1,FBXL5	1009,-44528
chr13:19967064-19968570	chr13	+	19967173	19968381	True	NR_034026,NR_027248	chr13,chr13	+,-	LOC100287114,ANKRD26P3	-48048,-48060
chr2:180725414-180725689	chr2	+	180725545	180725697	True	NM_152520,NR_031659,NM_182678	chr2,chr2,chr2	-,-,+	ZNF385B,MIR1258,UBE2E3	585,-12,1119414
chr16:30711077-30711988	chr16	+	30711200	30711698	True	NM_001014979,NM_006662	chr16,chr16	-,+	C16orf93,SRCAP	61917,-790
chr19:19281208-19281465	chr19	+	19281365	19281470	True	NM_001145785,NM_003721	chr19,chr19	-,+	MEF2B,RFXANK	-267,21537
chr7:95113445-95114678	chr7	+	95113741	95114591	True	NM_145872,NM_016116,NM_001018161	chr7,chr7,chr7	+,+,-	ASB4,ASB4,PON2	621,621,-49357
chr1:203832740-203833173	chr1	+	203832823	203832938	True	NM_003094,NR_027902	chr1,chr1	+,-	SNRPE,C1orf157	-2136,177511
chrX:86789003-86790651	chrX	+	86789149	86790592	True	NM_019117,NM_001145414	chrX,chrX	+,-	KLHL4,CHM	-16488,-1486583
chr9:88881682-88881994	chr9	+	88881900	88881982	True	NM_024635,NM_001010907	chr9,chr9	+,-	NAA35,C9orf153	-325901,-7381
chr6:127438888-127439204	chr6	+	127439165	127439249	True	NM_032784,NM_001139510	chr6,chr6	+,-	RSPO3,ECHDC1	798,224353
chr12:6602557-6603009	chr12	+	6602610	6602866	True	NM_016497,NM_014865	chr12,chr12	-,+	MRPL51,NCAPD2	-139,431
chr1:19989407-19991061	chr1	+	19989407	19990971	True	NM_181719,NM_000871	chr1,chr1	-,+	TMCO4,HTR6	135489,808
chr17:79906856-79907425	chr17	+	79906875	79907265	True	NM_001145113,NR_015454	chr17,chr17	-,+	MYADML2,LOC92659	-1766,-21221
chr17:77772257-77772610	chr17	+	77772341	77772427	True	NM_005189,NM_020649	chr17,chr17	+,-	CBX2,CBX8	-20415,-1426
chr12:29430583-29431363	chr12	+	29430610	29431350	True	NM_018099,NM_016570	chr12,chr12	+,-	FAR2,ERGIC2	-54070,102843
chr22:19937279-19938736	chr22	+	19937423	19938456	True	NM_001135162,NM_001135161,NM_000754,NM_006440	chr22,chr22,chr22,chr22	+,+,+,-	COMT,COMT,COMT,TXNRD2	588,3,-8219,-8064
chr5:82400411-82401080	chr5	+	82400634	82401112	True	NM_022550,NM_174909	chr5,chr5	+,-	XRCC4,TMEM167A	-27376,-27362
chr1:109930427-109931000	chr1	+	109930590	109931022	True	NM_001040709,NM_002959,NM_001205228	chr1,chr1,chr1	+,-,-	SYPL2,SORT1,SORT1	78077,9591,5007
chr9:86593850-86594235	chr9	+	86593881	86594235	True	NM_002140,NR_029605,NM_031263,NM_031262,NM_024945	chr9,chr9,chr9,chr9,chr9	-,-,-,-,+	HNRNPK,MIR7-1,HNRNPK,HNRNPK,RMI1	1384,-9109,999,1384,1401
chr4:56213175-56213515	chr4	+	56213294	56213491	True	NR_037969,NM_024592	chr4,chr4	-,+	LOC100506462,SRD5A3	38313,-957
chr9:6019418-6020787	chr9	+	6019530	6020794	True	NR_024095,NR_024094,NM_012416,NM_005511	chr9,chr9,chr9,chr9	-,-,-,+	RANBP6,RANBP6,RANBP6,MLANA	-3890,-3890,-3912,-128672
chr16:81822440-81822713	chr16	+	81822511	81822627	True	NM_002661,NM_145168	chr16,chr16	+,-	PLCG2,SDR42E1	-9632,222516
chr20:24449666-24449956	chr20	+	24449666	24449940	True	NM_024893,NM_178311	chr20,chr20	+,-	TMEM90B,GGTLC1	-30,-480250
chr19:51308377-51310019	chr19	+	51308571	51310067	True	NR_003067,NR_003069,NR_003068,NM_033068,NM_199249,NM_199250	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,+,-,-	SNORD88A,SNORD88C,SNORD88B,ACPT,C19orf48,C19orf48	-5779,-2893,-6189,-14950,-597,-599
chr1:205914189-205915773	chr1	+	205914294	205915720	True	NM_052934,NM_001123168,NM_134325	chr1,chr1,chr1	-,+,-	SLC26A9,FAM72A,SLC26A9	-1706,223190,-1706
chr4:87772744-87773288	chr4	+	87773071	87773254	True	NM_001166693,NM_197965	chr4,chr4	+,-	AFF1,SLC10A6	82899,-2655
chr19:50372093-50372383	chr19	+	50372218	50372333	True	NM_032375,NM_024682,NM_007254,NM_001168222,NM_001098633,NM_001098632	chr19,chr19,chr19,chr19,chr19,chr19	-,+,-,+,-,-	AKT1S1,TBC1D17,PNKP,TBC1D17,AKT1S1,AKT1S1	8302,8348,-1396,8348,8336,8368
chr8:134200366-134201621	chr8	+	134200372	134201629	True	NR_037944,NM_003882,NM_001045557,NM_001204870,NM_080838,NM_001204869	chr8,chr8,chr8,chr8,chr8,chr8	+,+,-,+,+,+	WISP1,WISP1,SLA,WISP1,WISP1,WISP1	1652,1652,-85062,1652,1652,1652
chr1:231472231-231472953	chr1	+	231472232	231472900	True	NM_032018,NM_175876,NM_001010984	chr1,chr1,chr1	+,-,+	C1orf124,EXOC8,C1orf124	781,728,781
chr9:133542553-133542924	chr9	+	133542614	133542894	True	NR_027440,NM_021619	chr9,chr9	-,+	LOC100272217,PRDM12	-87733,-2684
chr17:56245286-56245723	chr17	+	56245379	56245503	True	NM_017777,NM_001004707	chr17,chr17	-,+	MKS1,OR4D2	51213,1513
chr10:135090995-135091392	chr10	+	135090998	135091352	True	NM_001164490,NM_001109,NM_145806,NM_001164489	chr10,chr10,chr10,chr10	-,-,+,-	ADAM8,ADAM8,ZNF511,ADAM8	-591,-591,31070,-591
chr4:154388180-154388495	chr4	+	154388224	154388477	True	NR_001562,NM_015196,NM_001131007	chr4,chr4,chr4	-,+,+	ANXA2P1,KIAA0922,KIAA0922	-158261,-777,-777
chr7:12726034-12726276	chr7	+	12726046	12726216	True	NM_001195396,NM_001037164,NM_001135924,NM_212460,NM_005738	chr7,chr7,chr7,chr7,chr7	+,+,-,+,+	ARL4A,ARL4A,VWDE,ARL4A,ARL4A	694,235,-282194,235,694
chr18:43381294-43382339	chr18	+	43381406	43382213	True	NM_213602,NM_020964	chr18,chr18	+,-	SIGLEC15,EPG5	23331,165142
chr17:58504163-58504408	chr17	+	58504169	58504433	True	NM_181707,NM_032582	chr17,chr17	+,-	C17orf64,USP32	-4355,-34583
chr21:46239942-46240274	chr21	+	46239974	46240130	True	NM_058190,NM_006936	chr21,chr21	+,-	C21orf70,SUMO3	119824,-1930
chr15:57998970-57999423	chr15	+	57999260	57999404	True	NM_001018102,NM_015532,NM_170697,NR_027390	chr15,chr15,chr15,chr15	+,+,-,+	GRINL1A,GRINL1A,ALDH1A2,GRINL1A	-410,-410,306881,-410
chr3:151054112-151055838	chr3	+	151054157	151055880	True	NM_053002,NM_176876,NM_176894	chr3,chr3,chr3	+,-,-	MED12L,P2RY12,P2RY13	-249541,2755,-6820
chrX:102863073-102863668	chrX	+	102863213	102863571	True	NM_001142418,NM_032926,NM_001006933	chrX,chrX,chrX	-,+,+	MORF4L2,TCEAL3,TCEAL3	78225,-433,-433
chr3:11611074-11611666	chr3	+	11611108	11611649	True	NM_006395,NM_001128221	chr3,chr3	+,-	ATG7,VGLL4	-297149,-710
chr3:139396867-139397957	chr3	+	139396930	139397959	True	NM_001200047,NM_178177,NM_022131	chr3,chr3,chr3	-,-,+	NMNAT3,NMNAT3,CLSTN2	-45,-45,256067
chr13:39586966-39588009	chr13	+	39587015	39588011	True	NM_001012754,NM_145286	chr13,chr13	+,-	NHLRC3,STOML3	24443,-22019
chr1:53070639-53071185	chr1	+	53070781	53071203	True	NM_015696,NM_015269	chr1,chr1	+,-	GPX7,ZCCHC11	-2790,-52019
chrX:40137862-40138069	chrX	+	40137921	40138065	True	NM_001123384,NM_005765	chrX,chrX	-,+	BCOR,ATP6AP2	-101339,302150
chr11:11864083-11865918	chr11	+	11864162	11865954	True	NM_017944,NM_001018057	chr11,chr11	+,-	USP47,DKK3	-1243,164283
chr19:52873793-52874523	chr19	+	52873878	52874568	True	NM_001102657,NM_001145434	chr19,chr19	-,+	ZNF836,ZNF880	-198982,-765
chr5:121337549-121338826	chr5	+	121337809	121338710	True	NM_152546,NM_001178102	chr5,chr5	+,-	SRFBP1,LOX	-40210,74265
chr17:4979930-4980556	chr17	+	4979949	4980416	True	NM_017986,NM_153018	chr17,chr17	-,+	GPR172B,ZFP3	-41222,1337
chr21:28338871-28339100	chr21	+	28338885	28339129	True	NR_024357,NM_007038	chr21,chr21	+,-	NCRNA00113,ADAMTS5	755568,360
chr11:68037245-68038943	chr11	+	68037273	68038754	True	NM_022338,NM_002335	chr11,chr11	-,+	C11orf24,LRP5	765,41353
chr3:122131704-122132373	chr3	+	122131711	122131984	True	NM_014367,NM_019069	chr3,chr3	+,-	FAM162A,WDR5B	-28752,2955
chr4:75858688-75858982	chr4	+	75858807	75858971	True	NM_001729,NM_015393	chr4,chr4	-,+	BTC,PARM1	-138925,-573
chr12:54332496-54332723	chr12	+	54332496	54332756	True	NM_017410,NR_003716	chr12,chr12	+,-	HOXC13,HOTAIR	23,29809
chr14:67822356-67822590	chr14	+	67822386	67822637	True	NM_004094,NM_015994	chr14,chr14	+,-	EIF2S1,ATP6V1D	4396,4133
chr14:67822356-67822590	chr14	+	67819354	67819409	False	NM_004094,NM_015994	chr14,chr14	+,-	EIF2S1,ATP6V1D	7624,7366
chr6:43337780-43338552	chr6	+	43337811	43338507	True	NM_014345,NM_001198934	chr6,chr6	-,+	ZNF318,ABCC10	-630,56784
chr7:121764495-121765582	chr7	+	121764676	121764965	True	NM_005763,NR_036484	chr7,chr7	-,+	AASS,LOC154860	19438,178746
chr14:23442515-23442768	chr14	+	23442533	23442813	True	NM_001099780,NM_198086,NM_032876	chr14,chr14,chr14	+,-,-	PSMB11,JUB,JUB	68562,3669,9085
chr2:80530812-80531377	chr2	+	80530912	80531307	True	NM_004389,NM_178839	chr2,chr2	+,-	CTNNA2,LRRTM1	-790903,231
chr1:213183315-213183633	chr1	+	213183432	213183596	True	NM_144567,NM_001136138	chr1,chr1	-,+	ANGEL2,RPS6KC1	5622,40991
chr1:46769647-46770306	chr1	+	46769692	46770039	True	NM_006004,NM_006369	chr1,chr1	+,-	UQCRH,LRRC41	-366,-654
chr3:183946202-183946460	chr3	+	183946207	183946509	True	NM_005787,NM_138345	chr3,chr3	-,+	ALG3,VWA5B2	20300,1807
chr22:38082771-38083898	chr22	+	38082834	38083888	True	NM_006498,NM_024313,NM_001039141	chr22,chr22,chr22	-,+,+	LGALS2,NOL12,TRIOBP	-106810,-541,9106
chr16:22449400-22449782	chr16	+	22449443	22449828	True	NR_027154,NR_027460	chr16,chr16	+,-	LOC641298,RRN3P3	-1166,-407
chr16:22449400-22449782	chr16	-	21512054	21512439	False	NM_001077180,NR_027155	chr16,chr16	+,-	METTL9,LOC100271836	98416,1214
chr16:22449400-22449782	chr16	-	29605165	29605552	False	NR_002593,NM_001030288	chr16,chr16	-,+	SLC7A5P1,SPN	19539,68747
chr16:22449400-22449782	chr16	-	30345253	30345640	False	NR_002453,NM_013292	chr16,chr16	-,+	LOC595101,MYLPF	1108,40482
chr9:2829192-2829708	chr9	+	2829253	2829744	True	NM_133497,NM_014878	chr9,chr9	+,-	KCNV2,KIAA0020	-111785,14441
chr5:43496843-43498639	chr5	+	43497410	43498514	True	NM_022483,NM_012343	chr5,chr5	-,+	C5orf28,NNT	-13418,104276
chr18:20519323-20520442	chr18	+	20519500	20520284	True	NM_002894,NM_203291,NM_032933,NM_203292	chr18,chr18,chr18,chr18	+,+,-,+	RBBP8,RBBP8,C18orf45,RBBP8	-6259,-5715,497697,-5715
chr8:143723357-143723973	chr8	+	143723365	143723995	True	NM_015193,NR_033343,NM_001077527	chr8,chr8,chr8	-,+,-	ARC,PSCA,JRK	-27532,27730,27463
chr8:119610015-119611789	chr8	+	119610310	119611647	True	NM_006438,NM_001101676	chr8,chr8	+,-	COLEC10,SAMD12	467776,22587
chr14:77836369-77837214	chr14	+	77836593	77837049	True	NM_001010860,NM_213601	chr14,chr14	+,-	SAMD15,TMED8	6712,6403
chr10:23217028-23218567	chr10	+	23217119	23218417	True	NM_005028,NM_173081	chr10,chr10	-,+	PIP4K2A,ARMC3	-213616,-216
chr8:86571808-86573023	chr8	+	86572324	86572779	True	NR_003594,NM_172239	chr8,chr8	-,-	REXO1L2P,REXO1L1	2013,2997
chr2:168681716-168682719	chr2	+	168681856	168682744	True	NM_020981,NM_013233	chr2,chr2	+,-	B3GALT1,STK39	-6725,421411
chr7:919698-920292	chr7	+	920033	920341	True	NM_015949,NM_006869	chr7,chr7	+,-	GET4,ADAP1	-3894,73998
chr8:139503266-139504205	chr8	+	139503515	139504091	True	NM_015912,NM_017444	chr8,chr8	-,+	FAM135B,CHRAC1	5024,2017309
chr9:116137302-116138495	chr9	+	116137452	116138308	True	NM_017688,NM_031219	chr9,chr9	+,-	BSPRY,HDHD3	-25691,83
chr6:165532965-165533404	chr6	+	165533158	165533438	True	NM_144980,NR_027284	chr6,chr6	-,+	C6orf118,LOC441177	189723,867600
chr17:4800643-4800965	chr17	+	4800665	4800729	True	NM_000080,NM_001145536	chr17,chr17	-,+	CHRNE,C17orf107	5690,2218
chr1:223883044-223884363	chr1	+	223883058	223884166	True	NM_001143962,NM_001146068	chr1,chr1	-,+	CAPN8,CAPN2	-29622,5128
chr1:222722969-222724381	chr1	+	222723516	222724381	True	NM_024746,NM_198551	chr1,chr1	-,+	HHIPL2,MIA3	-2072,67062
chr9:99542466-99543362	chr9	+	99542757	99543251	True	NM_014930,NR_026792	chr9,chr9	-,+	ZNF510,LOC441455	-2429,-54718
chr7:95406759-95407574	chr7	+	95406891	95407596	True	NM_001135556,NM_001135557,NM_002612,NM_004411	chr7,chr7,chr7,chr7	+,+,-,+	DYNC1I1,DYNC1I1,PDK4,DYNC1I1	-5131,-5131,-180966,-5131
chr2:198505446-198506528	chr2	+	198505505	198506553	True	NM_144629,NM_138395	chr2,chr2	-,+	RFTN2,MARS2	34085,63474
chr19:16584624-16585431	chr19	+	16584782	16585076	True	NM_021235,NM_032207	chr19,chr19	-,+	EPS15L1,C19orf44	-2020,22128
chr12:119618565-119620163	chr12	+	119618782	119620171	True	NR_024246,NM_014365	chr12,chr12	-,+	LOC144742,HSPB8	121065,-2238
chr19:59085343-59085938	chr19	+	59085414	59085742	True	NM_003422	chr19	-	MZF1	-472
chr19:17857027-17857680	chr19	+	17857190	17857590	True	NM_001161359,NM_001161358,NM_001080421,NM_015122,NM_001161357	chr19,chr19,chr19,chr19,chr19	+,+,-,+,+	FCHO1,FCHO1,UNC13A,FCHO1,FCHO1	4695,936,-58182,4695,936
chrX:129116547-129116821	chrX	+	129116607	129116841	True	NM_021946,NM_001421	chrX,chrX	+,-	BCORL1,ELF4	22322,127684
chr3:62357399-62357660	chr3	+	62357438	62357528	True	NM_018008,NM_020685	chr3,chr3	-,+	FEZF2,C3orf14	1712,-52093
chr19:35770542-35771741	chr19	+	35770774	35771740	True	NM_152481,NM_021175	chr19,chr19	-,+	FAM187B,HAMP	-51146,1669
chr2:34175569-34177240	chr2	+	34175866	34176828	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-436985,-222582
chr9:139257023-139257503	chr9	+	139257274	139257498	True	NM_001200003,NM_001145639,NM_001080849	chr9,chr9,chr9	+,+,-	GPSM1,GPSM1,DNLZ	-8082,-9825,793
chr1:229761731-229761935	chr1	+	229761779	229761981	True	NM_001025247,NM_014409,NM_014777	chr1,chr1,chr1	-,-,+	TAF5L,TAF5L,URB2	15,15,-1
chr22:26906214-26907760	chr22	+	26906214	26907790	True	NM_001013694,NM_001008697,NM_012143	chr22,chr22,chr22	+,-,-	SRRD,TFIP11,TFIP11	-26415,697,697
chr7:1569416-1570153	chr7	+	1569444	1570192	True	NM_002360,NM_001080453,NM_001097620	chr7,chr7,chr7	+,-,-	MAFK,INTS1,TMEM184A	175,-25426,25924
chr2:27500221-27501474	chr2	+	27500486	27501086	True	NM_003459,NM_173650,NM_187841,NM_032546	chr2,chr2,chr2,chr2	-,+,+,+	SLC30A3,DNAJC5G,TRIM54,TRIM54	-14526,-2248,4210,4210
chrX:48930581-48930981	chrX	+	48930731	48930875	True	NM_007213,NM_001163323,NM_001029896	chrX,chrX,chrX	-,+,-	PRAF2,CCDC120,WDR45	837,-14259,6739
chr3:195943589-195944116	chr3	+	195943707	195944021	True	NM_001039617,NM_152672	chr3,chr3	-,+	ZDHHC19,OSTalpha	-5407,-375
chr6:117808070-117809364	chr6	+	117808273	117809405	True	NM_173674,NM_002944	chr6,chr6	+,-	DCBLD1,ROS1	-4504,-61255
chr11:102745754-102746244	chr11	+	102745753	102746283	True	NM_002426,NM_001080463	chr11,chr11	-,+	MMP12,DYNC2H1	11,233876
chr7:6490751-6491667	chr7	+	6490909	6491181	True	NM_001142936,NM_018890,NM_139179	chr7,chr7,chr7	-,+,-	DAGLB,RAC1,DAGLB	-3266,-76842,-3266
chr17:41153080-41153362	chr17	+	41153226	41153349	True	NM_000988,NM_001142654,NM_005533	chr17,chr17,chr17	+,-,+	RPL27,AARSD1,IFI35	-2831,-20681,5392
chr3:79067445-79067769	chr3	+	79067567	79067801	True	NM_001128929,NM_001145845,NM_133631	chr3,chr3,chr3	+,-,-	ROBO2,ROBO1,ROBO1	-1920455,858,858
chrX:70440648-70442139	chrX	+	70440660	70441639	True	NM_000166,NM_001097642,NM_201599	chrX,chrX,chrX	+,+,-	GJB1,GJB1,ZMYM3	1416,-5650,32449
chr22:19950699-19951321	chr22	+	19950818	19951318	True	NM_006440,NM_007310	chr22,chr22	-,+	TXNRD2,COMT	-21459,-799
chr9:37466847-37467782	chr9	+	37467025	37467652	True	NM_022490,NM_014872	chr9,chr9	+,-	POLR1E,ZBTB5	18292,-1618
chr14:59950220-59950482	chr14	+	59950266	59950496	True	NM_144581,NM_016475,NM_001098625	chr14,chr14,chr14	-,+,+	C14orf149,JKAMP,JKAMP	627,664,664
chr19:18044188-18044414	chr19	+	18044191	18044439	True	NM_001136203,NM_138442,NM_000215	chr19,chr19,chr19	+,+,-	CCDC124,CCDC124,JAK3	-426,1465,-85350
chr1:3662119-3662328	chr1	+	3662133	3662237	True	NR_033709,NR_033708,NR_033710,NR_033711,NR_033712,NM_152492	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,+	KIAA0495,KIAA0495,KIAA0495,KIAA0495,KIAA0495,CCDC27	1750,1750,1750,1750,1148,6727
chr16:14787728-14787948	chr16	+	14787915	14787975	True	NM_003561,NM_016561	chr16,chr16	-,+	PLA2G10,BFAR	601,-61298
chr16:14787728-14787948	chr16	+	14827033	14827093	False	NM_003561,NM_016561	chr16,chr16	-,+	PLA2G10,BFAR	-38507,-100416
chr9:131487704-131489390	chr9	+	131488081	131489437	True	NM_013355,NM_032799	chr9,chr9	+,-	PKN3,ZDHHC12	-23330,-1673
chr6:111927339-111927612	chr6	+	111927339	111927495	True	NM_001164281,NR_028338,NM_147686,NR_034109	chr6,chr6,chr6,chr6	-,-,-,+	TRAF3IP2,TRAF3IP2,TRAF3IP2,LOC643749	29,29,29,-122720
chr2:216878203-216878403	chr2	+	216878209	216878413	True	NM_018000,NM_001142310	chr2,chr2	-,+	MREG,TMEM169	1,68175
chr18:712337-712551	chr18	+	712337	712591	True	NM_001126123,NM_001071,NM_017512,NM_202758	chr18,chr18,chr18,chr18	-,+,-,-	ENOSF1,TYMS,ENOSF1,ENOSF1	121,-54784,121,-20
chr17:74553044-74553277	chr17	+	74553181	74553259	True	NM_134268,NR_004396,NR_004397,NR_004395	chr17,chr17,chr17,chr17	-,+,+,+	CYGB,SNORD1B,SNORD1C,SNORD1A	-19399,3930,1614,4455
chr19:39387586-39388204	chr19	+	39387808	39388063	True	NM_002503,NM_030593,NM_001001716,NM_012237,NR_034146,NM_001193286	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,-,-,-	NFKBIB,SIRT2,NFKBIB,SIRT2,SIRT2,SIRT2	2551,2490,2551,2451,-3013,2490
chr16:31084096-31084389	chr16	+	31084100	31084424	True	NM_001172669,NM_001172670,NM_024706,NM_001172668,NM_014699	chr16,chr16,chr16,chr16,chr16	-,-,-,-,+	ZNF668,ZNF668,ZNF668,ZNF668,ZNF646	-7691,-7691,1267,449,1318
chr12:57882218-57882639	chr12	+	57882397	57882561	True	NM_032496,NM_004990,NM_001080157	chr12,chr12,chr12	-,+,-	ARHGAP9,MARS,ARHGAP9	-8764,-713,-8973
chr19:1096846-1097185	chr19	+	1096995	1097078	True	NM_001039847,NM_002695,NM_002085,NM_001039848	chr19,chr19,chr19,chr19	+,-,+,+	GPX4,POLR2E,GPX4,GPX4	6857,-1604,6857,7570
chr2:225265905-225266253	chr2	+	225265926	225266272	True	NM_022915,NM_001122779,NM_024785	chr2,chr2,chr2	+,-,-	MRPL44,FAM124B,FAM124B	-443856,489,489
chr7:150650788-150652093	chr7	+	150650819	150651695	True	NM_172057,NM_000603,NM_001204798	chr7,chr7,chr7	-,+,-	KCNH2,NOS3,KCNH2	1272,36448,1272
chr6:43400107-43400440	chr6	+	43400148	43400420	True	NM_023932,NM_033450,NM_001198934	chr6,chr6,chr6	-,+,+	DLK2,ABCC10,ABCC10	22916,-710,-4907
chr16:50187900-50188202	chr16	+	50188000	50188228	True	NM_001040285,NM_001040284,NM_001173984	chr16,chr16,chr16	+,+,-	PAPD5,PAPD5,BRD7	-1222,-1222,214667
chr1:12945528-12947366	chr1	+	12946051	12946917	True	NM_001009611,NM_001012276,NM_023014	chr1,chr1,chr1	-,+,+	PRAMEF4,PRAMEF8,PRAMEF2	-26,29532,-29161
chr1:12945528-12947366	chr1	-	13420921	13421016	False	NM_001012276,NM_001098376,NM_001010890	chr1,chr1,chr1	-,+,+	PRAMEF8,PRAMEF15,PRAMEF9	-30156,159,159
chr1:12945528-12947366	chr1	-	13641718	13641813	False	NM_001012276,NM_001098376,NM_001010890	chr1,chr1,chr1	-,+,+	PRAMEF8,PRAMEF15,PRAMEF9	-30168,159,159
chr2:216172148-216173838	chr2	+	216172593	216173719	True	NM_002026,NM_004044	chr2,chr2	-,+	FN1,ATIC	127130,2959
chr6:47665924-47667847	chr6	+	47665958	47667760	True	NM_153838,NM_001013732	chr6,chr6	+,-	GPR115,C6orf138	4,368715
chr22:38202657-38202873	chr22	+	38202709	38202893	True	NM_138797,NM_014291,NM_005318,NM_001171690	chr22,chr22,chr22,chr22	-,+,+,+	ANKRD54,GCAT,H1F0,GCAT	37512,1018,-1649,1018
chr8:104152277-104152734	chr8	+	104152311	104152531	True	NM_024812,NM_001024372,NR_027071	chr8,chr8,chr8	+,+,-	BAALC,BAALC,C8orf56	389,389,1089
chr11:73466631-73467167	chr11	+	73466631	73467127	True	NM_198896,NM_016055,NM_002869	chr11,chr11,chr11	-,+,-	RAB6A,MRPL48,RAB6A	5130,31789,5130
chr10:121356131-121356365	chr10	+	121356209	121356412	True	NM_001033925,NM_004281,NM_003252	chr10,chr10,chr10	-,+,-	TIAL1,BAG3,TIAL1	179,54469,179
chr19:12780267-12780477	chr19	+	12780288	12780492	True	NM_001099737,NM_001173498,NM_032332,NM_000528,NM_016145,NR_029375	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,-,-,+	WDR83,MAN2B1,WDR83,MAN2B1,C19orf56,WDR83	-2721,-2697,24,-2697,23,-2721
chr2:102606523-102607766	chr2	+	102606536	102607617	True	NM_173343,NM_004633,NM_001145664	chr2,chr2,chr2	+,+,-	IL1R2,IL1R2,RFX8	7841,688,-515371
chr16:28551361-28551799	chr16	+	28551416	28551853	True	NM_138414,NM_001042483,NM_012385	chr16,chr16,chr16	+,-,-	CCDC101,NUPR1,NUPR1	13395,-921,-921
chr5:39357738-39358802	chr5	+	39357857	39358791	True	NM_001737,NM_003999	chr5,chr5	-,+	C9,OSMR	5914,-511808
chr5:118689972-118690819	chr5	+	118690067	118690679	True	NM_173666,NM_014350	chr5,chr5	-,+	DTWD2,TNFAIP8	-365827,916
chr12:20984145-20985567	chr12	+	20984472	20985543	True	NM_019844,NM_021094	chr12,chr12	+,-	SLCO1B3,SLCO1A2	-20898,502341
chr4:2814716-2814966	chr4	+	2814770	2814892	True	NM_001145855,NM_001145856,NM_024309,NM_003023	chr4,chr4,chr4,chr4	+,+,-,+	SH3BP2,SH3BP2,TNIP2,SH3BP2	-875,5019,-56667,5648
chr12:96589142-96589698	chr12	+	96589217	96589598	True	NM_000895,NM_005230	chr12,chr12	-,+	LTA4H,ELK3	-159852,-1061
chr20:60698544-60699138	chr20	+	60698761	60698975	True	NM_144703,NM_002792	chr20,chr20	+,-	LSM14B,PSMA7	-1295,19549
chr5:96514859-96516394	chr5	+	96514982	96516332	True	NM_001159749,NM_018343,NM_175920	chr5,chr5,chr5	-,-,+	RIOK2,RIOK2,LNPEP	2723,2723,-220888
chr19:56631558-56631906	chr19	+	56631580	56631920	True	NM_001002836,NM_018337	chr19,chr19	-,+	ZNF787,ZNF444	779,20635
chr14:56010491-56011614	chr14	+	56010539	56011565	True	NM_004986,NR_027123	chr14,chr14	+,-	KTN1,C14orf33	35359,35305
chr6:19838934-19839188	chr6	+	19839014	19839080	True	NM_001546,NM_001080480	chr6,chr6	+,-	ID4,MBOAT1	-1448,373640
chr15:72668587-72668836	chr15	+	72668666	72668874	True	NR_027262,NM_000520	chr15,chr15	+,-	C15orf34,HEXA	-264,-146
chr20:30456373-30456757	chr20	+	30456583	30456643	True	NM_001012644,NM_177991,NM_001008409,NM_080611	chr20,chr20,chr20,chr20	-,-,+,-	DUSP15,DUSP15,TTLL9,DUSP15	1208,1418,1861,1886
chr2:165459210-165459893	chr2	+	165459302	165459633	True	NM_001040142,NM_004490	chr2,chr2	+,-	SCN2A,GRB14	636278,18777
chr4:88344183-88345566	chr4	+	88344315	88345394	True	NM_198038,NM_024047,NM_016245	chr4,chr4,chr4	+,+,-	NUDT9,NUDT9,HSD17B11	-631,-631,-31860
chr16:48419830-48420137	chr16	+	48419888	48420148	True	NM_003031,NM_031490	chr16,chr16	-,+	SIAH1,LONP2	-659,-141728
chr10:97667573-97667921	chr10	+	97667581	97667895	True	NM_001130446,NR_036113	chr10,chr10	+,-	C10orf131,MIR3157	-56,156311
chr12:112453039-112454549	chr12	+	112453435	112454375	True	NM_001193453,NM_138341,NM_006817,NM_001193531,NM_001034025	chr12,chr12,chr12,chr12,chr12	-,-,+,-,+	TMEM116,TMEM116,ERP29,TMEM116,ERP29	-2412,-2412,-2334,-2412,-2334
chr19:49977887-49978645	chr19	+	49977891	49978681	True	NM_001204502,NM_001204503,NM_001459,NM_017916	chr19,chr19,chr19,chr19	+,+,+,-	FLT3LG,FLT3LG,FLT3LG,PIH1D1	-476,-124,-476,-22776
chr14:98622109-98623016	chr14	+	98622371	98623017	True	NR_015430,NM_182560	chr14,chr14	-,+	C14orf64,C14orf177	-177910,554932
chr7:27702448-27703234	chr7	+	27702597	27703053	True	NM_152740,NM_001079864	chr7,chr7	-,+	HIBADH,TAX1BP1	23,76684
chr8:27468999-27469336	chr8	+	27469005	27469273	True	NM_001831,NM_016240,NM_203339,NM_001171138	chr8,chr8,chr8,chr8	-,+,-,-	CLU,SCARA3,CLU,CLU	3104,22303,-67,45
chr20:62104807-62105088	chr20	+	62104976	62105056	True	NM_172106,NM_172107,NM_024299,NM_172108,NM_172109,NM_004518	chr20,chr20,chr20,chr20,chr20,chr20	-,-,+,-,-,-	KCNQ2,KCNQ2,PPDPF,KCNQ2,KCNQ2,KCNQ2	-983,-983,47076,-983,-983,-983
chrX:96137997-96138672	chrX	+	96137997	96138364	True	NR_003539,NM_013347	chrX,chrX	-,+	LOC643486,RPA4	-545096,542
chrX:73597681-73598261	chrX	+	73597983	73598191	True	NM_006517,NR_028379	chrX,chrX	+,-	SLC16A2,MIR374AHG	42893,-84574
chr2:70518065-70518679	chr2	+	70518259	70518697	True	NM_016297,NM_003096	chr2,chr2	+,-	PCYOX1,SNRPG	-33086,2222
chr9:136889983-136890589	chr9	+	136889982	136890530	True	NM_003371,NR_015427	chr9,chr9	-,+	VAV2,NCRNA00094	-32536,30
chr1:50514121-50515736	chr1	+	50514225	50515779	True	NM_032785,NM_001144777	chr1,chr1	-,+	AGBL4,ELAVL4	-24599,-590
chr2:219926436-219928397	chr2	+	219926539	219928321	True	NR_024385,NM_002181,NR_036081	chr2,chr2,chr2	+,-,-	LOC151300,IHH,MIR3131	-85592,-1301,-3067
chr16:8813104-8814505	chr16	+	8813108	8814438	True	NM_001127448,NM_000663,NM_015421	chr16,chr16,chr16	+,+,-	ABAT,ABAT,TMEM186	134,-6333,77117
chr12:117625361-117626119	chr12	+	117625373	117626045	True	NM_153348,NM_033624,NM_015002	chr12,chr12,chr12	+,-,-	FBXW8,FBXO21,FBXO21	-276664,2310,2310
chr17:42217613-42218489	chr17	+	42217734	42217812	True	NM_001171251,NM_005474,NM_024032	chr17,chr17,chr17	+,-,+	C17orf53,HDAC5,C17orf53	1461,-16720,1461
chr8:19173218-19174305	chr8	+	19173218	19174303	True	NM_001174159,NM_001174160,NM_001130518,NM_022071	chr8,chr8,chr8,chr8	+,+,-,+	SH2D4A,SH2D4A,CSGALNACT1,SH2D4A	-1782,-2188,285804,-2188
chr13:52018534-52018807	chr13	+	52018533	52018609	True	NM_001039937,NM_012141,NM_001101320,NM_001039938	chr13,chr13,chr13,chr13	-,-,+,-	INTS6,INTS6,SERPINE3,INTS6	8722,8722,-103417,8722
chr19:42721577-42722066	chr19	+	42721728	42722104	True	NM_133444,NM_133328	chr19,chr19	+,-	ZNF526,DEDD2	2387,-15
chr5:156570684-156571268	chr5	+	156570728	156571317	True	NM_004270,NM_001100816,NM_005546	chr5,chr5,chr5	-,-,+	MED7,MED7,ITK	-807,-942,36589
chr14:67708619-67710300	chr14	+	67708700	67709678	True	NM_022474,NM_015994	chr14,chr14	+,-	MPP5,ATP6V1D	-730,117092
chr6:123111386-123111899	chr6	+	123111406	123111909	True	NM_006714,NM_020755	chr6,chr6	+,-	SMPDL3A,SERINC1	-1486,-318454
chr22:38715246-38715766	chr22	+	38715422	38715656	True	NM_152221,NM_001161573,NM_001894	chr22,chr22,chr22	-,+,-	CSNK1E,MAFF,CSNK1E	-2009,-116446,-1333
chr8:27491294-27491497	chr8	+	27491297	27491505	True	NM_016240,NM_001831,NM_182826	chr8,chr8,chr8	+,-,+	SCARA3,CLU,SCARA3	71,-18970,71
chr11:102706702-102708324	chr11	+	102706707	102708202	True	NM_001080463,NM_002422	chr11,chr11	+,-	DYNC2H1,MMP3	271957,6191
chr1:11983336-11984022	chr1	+	11983524	11983860	True	NM_000302,NM_138346	chr1,chr1	+,-	PLOD1,KIAA2013	10863,2675
chr5:133451858-133453212	chr5	+	133452194	133453128	True	NM_001134851,NR_033449,NM_003202,NM_213648,NM_006930,NM_201632,NM_201634	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,-,+,+	TCF7,TCF7,TCF7,TCF7,SKP1,TCF7,TCF7	-947,-895,-1843,-947,59646,-947,-947
chr15:75744510-75744867	chr15	+	75744527	75744905	True	NM_001145357,NM_015477,NM_024608,NM_001145358	chr15,chr15,chr15,chr15	-,-,+,-	SIN3A,SIN3A,NEIL1,SIN3A	3269,-601,-105247,-440
chr1:147230766-147230967	chr1	+	147230795	147230933	True	NM_005267,NM_181703	chr1,chr1	+,-	GJA8,GJA5	144012,1831
chr1:1283672-1283970	chr1	+	1283714	1283876	True	NM_152228,NM_004421	chr1,chr1	+,-	TAS1R3,DVL1	-17039,666
chr11:118304366-118305017	chr11	+	118304542	118305044	True	NM_001197104,NM_005933,NM_001040651	chr11,chr11,chr11	+,+,-	MLL,MLL,CD3D	2160,2160,-91083
chr11:3239270-3239637	chr11	+	3239381	3239585	True	NR_027138,NM_001164377	chr11,chr11	+,-	C11orf36,MRGPRG	16,508
chr2:198241697-198242719	chr2	+	198241860	198242419	True	NM_025147,NM_012433	chr2,chr2	+,-	COQ10B,SF3B1	75811,57403
chr19:55255324-55257081	chr19	+	55255371	55255803	True	NM_001127255,NM_015868	chr19,chr19	-,+	NLRP7,KIR2DL3	203120,-5448
chr4:6910276-6910489	chr4	+	6910282	6910508	True	NM_020773,NM_153376,NM_001113361	chr4,chr4,chr4	+,-,+	TBC1D14,CCDC96,TBC1D14	986,134270,662
chr11:108373589-108375384	chr11	+	108373983	108375217	True	NM_153705,NM_004398	chr11,chr11	-,+	KDELC2,DDX10	-4824,160598
chr16:69795397-69796073	chr16	+	69795543	69796121	True	NM_014062,NM_199423,NM_007014	chr16,chr16,chr16	-,+,+	NOB1,WWP2,WWP2	-6714,152,152
chr5:157277473-157277961	chr5	+	157277661	157277794	True	NM_014666,NM_173491,NM_001195555,NM_001195556	chr5,chr5,chr5,chr5	-,+,-,-	CLINT1,LSM11,CLINT1,CLINT1	8446,-106959,8446,8446
chr4:2793123-2794186	chr4	+	2793322	2794146	True	NM_001122681,NM_024309	chr4,chr4	+,-	SH3BP2,TNIP2	603,-35219
chr11:77184659-77185085	chr11	+	77184659	77185103	True	NM_001128620,NM_002576,NM_173039	chr11,chr11,chr11	-,-,+	PAK1,PAK1,AQP11	55,55,115576
chr8:86377885-86379533	chr8	+	86377907	86379566	True	NM_001738,NM_000067	chr8,chr8	-,+	CA1,CA2	-87565,-1834
chr5:92919333-92919574	chr5	+	92919452	92919603	True	NR_021490,NR_021491,NM_005654	chr5,chr5,chr5	-,-,+	FLJ42709,FLJ42709,NR2F1	-2449,-2499,-465
chr17:73403214-73405011	chr17	+	73403801	73404838	True	NR_037449,NM_002086,NM_203506	chr17,chr17,chr17	+,-,-	MIR3678,GRB2,GRB2	-1702,-2012,-2011
chr6:74173554-74175180	chr6	+	74173797	74174866	True	NM_001123226,NM_012123,NM_133645,NM_138441	chr6,chr6,chr6,chr6	+,+,+,-	MTO1,MTO1,MTO1,MB21D1	-2402,-2402,-2402,-11754
chr1:84876588-84878388	chr1	+	84876856	84878406	True	NM_058248,NR_003927	chr1,chr1	+,-	DNASE2B,UOX	-2874,-13280
chr12:110713348-110714998	chr12	+	110713880	110714969	True	NM_001135765,NM_170665,NM_001681,NM_016238	chr12,chr12,chr12,chr12	+,+,+,-	ATP2A2,ATP2A2,ATP2A2,ANAPC7	4062,4062,4062,126617
chr20:37214153-37215835	chr20	+	37214182	37215830	True	NM_001018082,NR_027241	chr20,chr20	+,-	ADIG,LOC388796	-4395,-150164
chr10:5733008-5734221	chr10	+	5733363	5734265	True	NM_017782,NR_037164	chr10,chr10	+,-	C10orf18,ASB13	-6620,-24805
chr13:46417352-46417995	chr13	+	46417466	46418007	True	NM_198849,NM_152719	chr13,chr13	-,+	SIAH3,SPERT	7890,-141072
chr4:26863428-26863838	chr4	+	26863479	26863880	True	NM_001169118,NM_001169117,NM_000730,NM_020860	chr4,chr4,chr4,chr4	+,+,-,+	STIM2,STIM2,CCKAR,STIM2	-1227,-1227,-371437,-1227
chr17:79333484-79334802	chr17	+	79333638	79334620	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	38919,-29164
chr17:79993861-79994189	chr17	+	79993860	79994114	True	NM_016286,NM_005052,NM_001195218	chr17,chr17,chr17	-,+,-	DCXR,RAC3,DCXR	1509,-4379,1509
chr3:120436073-120436406	chr3	+	120436141	120436282	True	NM_173825,NM_005513	chr3,chr3	-,+	RABL3,GTF2E1	25161,25275
chr5:128297788-128298467	chr5	+	128298154	128298460	True	NM_014031,NM_001999,NM_001017372	chr5,chr5,chr5	+,-,+	SLC27A6,FBN2,SLC27A6	2749,-424419,2752
chr20:33140712-33142469	chr20	+	33140948	33141939	True	NM_080476,NM_032514,NM_181509	chr20,chr20,chr20	-,+,+	PIGU,MAP1LC3A,MAP1LC3A	123200,4579,-6307
chr19:5720854-5721100	chr19	+	5720901	5720975	True	NM_004793,NM_152784	chr19,chr19	-,+	LONP1,TMEM146	-725,-264
chr1:104292685-104294322	chr1	+	104292768	104294339	True	NM_004038,NM_001008221,NM_001008218,NM_001008219	chr1,chr1,chr1,chr1	+,+,+,+	AMY1A,AMY1A,AMY1B,AMY1C	-391,-552,-368,-390
chr1:104292685-104294322	chr1	+	104198630	104200200	False	NM_004038,NM_001008221,NM_001008218,NM_001008219	chr1,chr1,chr1,chr1	+,+,+,+	AMY1A,AMY1A,AMY1B,AMY1C	-391,-552,-368,-390
chr1:104292685-104294322	chr1	-	104237013	104238583	False	NM_004038,NM_001008221,NM_001008218,NM_001008219	chr1,chr1,chr1,chr1	-,-,-,-	AMY1A,AMY1A,AMY1B,AMY1C	391,552,368,390
chr1:246730238-246731390	chr1	+	246730358	246730950	True	NM_152609,NM_001139459,NM_022366	chr1,chr1,chr1	+,+,-	CNST,CNST,TFB2M	-770,-770,-793
chr9:33289217-33289625	chr9	+	33289524	33289592	True	NM_147134,NM_002504,NM_004323,NM_147133	chr9,chr9,chr9,chr9	+,+,-,+	NFX1,NFX1,BAG1,NFX1	825,825,-24765,825
chrX:23755284-23756076	chrX	+	23755476	23755856	True	NM_001037171,NM_002970,NM_001033583	chrX,chrX,chrX	-,+,-	ACOT9,SAT1,ACOT9	5601,45418,5601
chr3:51998827-51999070	chr3	+	51998900	51999028	True	NM_080865,NM_001174100,NM_001146314,NM_033010,NR_027476,NM_033008,NM_032750,NM_020418	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,-,-,-,-,-,-,-	GPR62,PCBP4,ABHD14B,PCBP4,ABHD14B,PCBP4,ABHD14B,PCBP4	-9621,2504,9668,-1992,9668,2504,9668,2472
chr6:56696094-56696546	chr6	+	56696164	56696570	True	NM_152731,NM_001723	chr6,chr6	+,-	BEND6,DST	123202,-188470
chr4:23890320-23891081	chr4	+	23890326	23891126	True	NM_003102,NM_013261	chr4,chr4	+,-	SOD3,PPARGC1A	905958,628
chr1:151032969-151033977	chr1	+	151032992	151034013	True	NM_001038707,NM_144618,NM_006818,NM_020239	chr1,chr1,chr1,chr1	-,+,+,-	CDC42SE1,GABPB2,MLLT11,CDC42SE1	-867,9066,-895,-867
chr7:90006838-90007823	chr7	+	90006838	90007874	True	NM_006980,NM_001185072	chr7,chr7	-,+	MTERF,CLDN12	1502197,24773
chr9:5339862-5341406	chr9	+	5339865	5341205	True	NM_014143,NM_002195,NM_006911	chr9,chr9,chr9	+,+,-	CD274,INSL4,RLN1	109297,-108497,8
chr19:22233570-22234022	chr19	+	22233611	22233873	True	NM_007153,NM_033468	chr19,chr19	-,+	ZNF208,ZNF257	-39866,1392
chr15:33011164-33011413	chr15	+	33011267	33011459	True	NM_013372,NM_001191323,NM_001191322,NR_036650	chr15,chr15,chr15,chr15	+,+,+,-	GREM1,GREM1,GREM1,LOC100288615	-1113,-1113,-1113,-185325
chrX:152157997-152158593	chrX	+	152158151	152158445	True	NM_001184924,NM_001178115,NM_052926,NM_001103151,NM_001103150	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	PNMA5,ZNF185,PNMA5,PNMA5,PNMA5	4276,-47987,2366,2366,2366
chr2:173962006-173963984	chr2	+	173962204	173963900	True	NR_033882,NM_016653	chr2,chr2	-,+	LOC339751,ZAK	182921,-21700
chr3:183979909-183980190	chr3	+	183979920	183980124	True	NM_033259,NM_014693	chr3,chr3	-,+	CAMK2N2,ECE2	-669,-12526
chr2:211085511-211086544	chr2	+	211085667	211086155	True	NM_001608,NM_199229	chr2,chr2	-,+	ACADL,RPE	4110,-218337
chr12:52626335-52626746	chr12	+	52626350	52626740	True	NM_182507,NM_005556	chr12,chr12	-,+	KRT80,KRT7	-40566,213
chr5:34189959-34190193	chr5	+	34190089	34190223	True	NM_016568,NR_037951	chr5,chr5	+,-	RXFP3,C1QTNF3-AMACR	-253649,-65456
chr1:21980437-21981487	chr1	+	21980666	21981001	True	NM_001177520,NM_001145658	chr1,chr1	+,-	ALPL,RAP1GAP	-144859,-2318
chr8:95273452-95273984	chr8	+	95273465	95274033	True	NM_005261,NM_181702,NM_001161778	chr8,chr8,chr8	-,-,+	GEM,GEM,PDP1	564,564,-343525
chr18:3881835-3882699	chr18	+	3881931	3882732	True	NR_024101,NM_004746	chr18,chr18	+,-	FLJ35776,DLGAP1	-287882,-1796
chr12:102527408-102529042	chr12	+	102527464	102529027	True	NM_017915,NM_024057	chr12,chr12	+,-	C12orf48,NUP37	-13572,-15103
chr2:65218893-65219355	chr2	+	65219085	65219383	True	NR_036586,NM_003038,NM_001193493	chr2,chr2,chr2	-,+,+	LOC400958,SLC1A4,SLC1A4	-59504,-2641,-3557
chr15:102262876-102264111	chr15	+	102263275	102264077	True	NM_152334,NM_001005326	chr15,chr15	-,+	TARSL2,OR4F6	621,81845
chr7:81395486-81396712	chr7	+	81395597	81396749	True	NM_001010934,NM_001010932,NM_001010933,NM_001127444,NM_001010931,NM_000601	chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,+,-,-	HGF,HGF,HGF,CD36,HGF,HGF	2761,2761,2761,-1119893,2761,2761
chr9:117084918-117085494	chr9	+	117084979	117085511	True	NM_000607,NM_000608,NM_030767	chr9,chr9,chr9	+,+,-	ORM1,ORM2,AKNA	-47,6557,71224
chr9:117084918-117085494	chr9	+	117091858	117092282	False	NM_000607,NM_000608,NM_030767	chr9,chr9,chr9	+,+,-	ORM1,ORM2,AKNA	-6606,-52,64453
chr11:62314921-62315465	chr11	+	62315040	62315434	True	NM_001620,NM_000327,NM_024060	chr11,chr11,chr11	-,+,-	AHNAK,ROM1,AHNAK	-708,64778,-708
chr3:66553918-66554305	chr3	+	66553946	66554235	True	NR_028475,NM_015541	chr3,chr3	+,-	SLC25A26,LRIG1	-282829,-3101
chr17:30483129-30483793	chr17	+	30483134	30483809	True	NM_018307,NR_002222	chr17,chr17	+,-	RHOT1,ARGFXP2	-13719,-4544
chr4:146426662-146427154	chr4	+	146426783	146426963	True	NM_001003688,NM_001102653	chr4,chr4	+,-	SMAD1,OTUD4	-22890,-325951
chr11:57482499-57483542	chr11	+	57482519	57483025	True	NR_037645,NM_015959,NM_001144012,NR_037646,NM_153450,NR_026593	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,-,+	TMX2,TMX2,TMX2,TMX2-CTNND1,MED19,TMX2	-2585,-2585,-2585,-2585,-2846,-2585
chr15:57528420-57529560	chr15	+	57528448	57529227	True	NM_207040,NR_015419	chr15,chr15	+,-	TCF12,LOC145783	-16852,-317751
chr3:130743790-130744006	chr3	+	130743829	130744055	True	NM_145910,NM_014065,NM_001146003,NM_024800	chr3,chr3,chr3,chr3	+,-,+,+	NEK11,ASTE1,NEK11,NEK11	1638,1641,1638,1638
chr15:71047728-71049134	chr15	+	71048105	71048939	True	NM_018003,NM_001199017	chr15,chr15	-,+	UACA,LRRC49	6969,135988
chr11:36595792-36596032	chr11	+	36595802	36595954	True	NM_000448,NM_000536	chr11,chr11	+,-	RAG1,RAG2	-6290,23925
chr11:68078886-68079414	chr11	+	68078945	68079406	True	NM_022338,NM_002335	chr11,chr11	-,+	C11orf24,LRP5	-39476,701
chr1:247273808-247274143	chr1	+	247274030	247274181	True	NM_024804,NM_001142572,NM_207401,NM_173858	chr1,chr1,chr1,chr1	-,-,-,+	ZNF669,ZNF669,C1orf229,VN1R5	-6356,-6356,1591,145192
chr11:44973765-44975129	chr11	+	44973789	44974962	True	NM_006034,NR_026681,NM_001076787	chr11,chr11,chr11	-,+,-	TP53I11,LOC221122,TP53I11	-1181,20490,-1181
chr9:44990509-44990954	chr9	+	44990929	44991003	True	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-744,-1360199
chr9:44990509-44990954	chr9	+	45727730	45727794	False	NM_001145196,NR_024060	chr9,chr9	-,+	FAM75A6,FAM27A	-2097000,-752
chr9:44990509-44990954	chr9	-	67793417	67793491	False	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	748,133269
chr12:56240328-56240559	chr12	+	56240348	56240464	True	NR_036479,NM_002429	chr12,chr12	+,-	LOC440104,MMP19	-17015,-3613
chr5:72682217-72682564	chr5	+	72682221	72682586	True	NM_004472,NM_001037637	chr5,chr5	-,+	FOXD1,BTF3	61821,111663
chr1:179263757-179264932	chr1	+	179264092	179264795	True	NM_001136001,NM_003101	chr1,chr1	-,+	ABL2,SOAT1	-65273,-1126
chr7:4817313-4817561	chr7	+	4817364	4817574	True	NM_020144,NM_014855	chr7,chr7	-,+	PAPOLB,KIAA0415	84101,-2153
chr16:1359006-1359220	chr16	+	1359006	1359216	True	NM_194261,NM_194260,NM_001001410,NM_003345,NM_194259	chr16,chr16,chr16,chr16,chr16	+,+,-,+,+	UBE2I,UBE2I,C16orf42,UBE2I,UBE2I	-9,144,42707,421,421
chr12:56614294-56615191	chr12	+	56614543	56615057	True	NM_173596,NM_194359,NM_005785,NM_194358,NM_001135195,NM_024068	chr12,chr12,chr12,chr12,chr12,chr12	+,-,-,-,+,+	SLC39A5,RNF41,RNF41,RNF41,SLC39A5,OBFC2B	8762,728,697,697,9443,3067
chr2:169880598-169881497	chr2	+	169880743	169881508	True	NM_005771,NM_003742	chr2,chr2	+,-	DHRS9,ABCB11	39790,6386
chr6:11115126-11115958	chr6	+	11115171	11115741	True	NM_001135575,NM_207582	chr6,chr6	+,-	LOC221710,ERVFRDE1	-20966,-3100
chr17:3339555-3341070	chr17	+	3339569	3340917	True	NM_012373,NM_003554	chr17,chr17	+,-	OR3A3,OR1E2	-15763,-2434
chr7:99716951-99717155	chr7	+	99717092	99717190	True	NM_139315,NM_152755,NM_001190415,NR_033792,NM_203397,NM_005641	chr7,chr7,chr7,chr7,chr7,chr7	-,+,-,-,+,-	TAF6,CNPY4,TAF6,TAF6,MBLAC1,TAF6	-71,74,341,-97,7129,-97
chr2:112815495-112816901	chr2	+	112815773	112816895	True	NM_022662,NM_032824	chr2,chr2	-,+	ANAPC1,TMEM87B	-174032,-3024
chr5:159612409-159614237	chr5	+	159612563	159613846	True	NM_001130958,NM_001130864	chr5,chr5	+,-	FABP6,PWWP2A	527,-66111
chr2:206954655-206955101	chr2	+	206954864	206955005	True	NM_001037663,NM_017759	chr2,chr2	+,-	EEF1B2,INO80D	69312,-3958
chr19:54310807-54311297	chr19	+	54310841	54311008	True	NM_033297,NR_029866	chr19,chr19	-,+	NLRP12,MIR373	1002,-18933
chr1:20496981-20497909	chr1	+	20497055	20497801	True	NM_001105572,NM_152376	chr1,chr1	-,+	PLA2G2C,UBXN10	3936,14776
chr2:102091687-102091995	chr2	+	102091687	102091995	True	NM_017546,NM_004834,NM_001145664	chr2,chr2,chr2	+,+,-	C2orf29,MAP4K4,RFX8	-222395,222492,-522
chr9:86595328-86595878	chr9	+	86595371	86595795	True	NM_002140,NM_031263,NM_031262,NM_024945	chr9,chr9,chr9,chr9	-,-,-,+	HNRNPK,HNRNPK,HNRNPK,RMI1	0,-187,0,17
chr15:100879278-100880355	chr15	+	100879288	100880164	True	NM_024708,NM_139057	chr15,chr15	+,-	ASB7,ADAMTS17	262590,2069
chr22:37583044-37583995	chr22	+	37583269	37583839	True	NM_013385,NM_182486,NM_031910	chr22,chr22,chr22	+,-,-	CYTH4,C1QTNF6,C1QTNF6	94655,541,541
chr17:42992207-42992446	chr17	+	42992392	42992494	True	NM_001131019,NM_213607,NM_002055	chr17,chr17,chr17	-,+,-	GFAP,CCDC103,GFAP	470,-15289,470
chr18:24768455-24768775	chr18	+	24768455	24768793	True	NR_026908,NM_031422	chr18,chr18	+,-	C18orf16,CHST9	-323244,-3166
chr19:14062508-14062901	chr19	+	14062657	14062825	True	NM_138353,NM_001146255,NM_001146254	chr19,chr19,chr19	+,-,-	DCAF15,PODNL1,PODNL1	493,1429,1429
chr11:63992025-63992296	chr11	+	63992053	63992323	True	NM_031472,NM_001160389,NM_001033678,NM_032344,NM_005528,NM_003377,NM_001160392,NM_001160393,NM_001160390,NM_001128613,NM_001128612	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,+,+,+,-,-,-,+,+	TRPT1,TRPT1,TRPT1,NUDT22,DNAJC4,VEGFB,TRPT1,TRPT1,TRPT1,NUDT22,NUDT22	1453,1453,1453,1414,5429,9942,1453,1068,1453,1414,1414
chr1:231526752-231527887	chr1	+	231526756	231527738	True	NM_032018,NM_022051	chr1,chr1	+,-	C1orf124,EGLN1	-53125,33107
chr9:170010-171728	chr2	-	114203633	114203694	True	NR_024005,NM_172003	chr2,chr2	-,+	DDX11L2,CBWD2	155520,-8427
chr2:47628683-47628913	chr2	+	47628683	47628760	True	NM_022055,NM_000251	chr2,chr2	-,+	KCNK12,MSH2	168769,1502
chr17:41361680-41363534	chr17	+	41361720	41363530	True	NM_007300,NM_145041	chr17,chr17	-,+	BRCA1,TMEM106A	-84220,363
chr16:56701589-56701862	chr16	+	56701632	56701896	True	NM_005949,NR_003669,NM_005950,NM_005951	chr16,chr16,chr16,chr16	+,+,-,+	MT1F,MT1IP,MT1G,MT1H	-9828,7752,131,1829
chr8:144777122-144777664	chr8	+	144777210	144777558	True	NR_015445,NM_001162914	chr8,chr8	+,-	BREA2,LOC100130274	1726,12771
chr19:37341235-37341575	chr19	+	37341281	37341585	True	NM_003419,NM_206894	chr19,chr19	+,-	ZNF345,ZNF790	-71,-11997
chr11:118955320-118955586	chr11	+	118955404	118955494	True	NM_000190,NM_001024382,NM_002105	chr11,chr11,chr11	+,+,-	HMBS,HMBS,H2AFX	92,3202,10733
chr9:33749122-33750045	chr9	+	33749168	33750092	True	NM_001197097,NR_023917,NM_007343,NM_001197098	chr9,chr9,chr9,chr9	+,-,+,+	PRSS3,PTENP1,PRSS3,PRSS3	371,-71750,371,726
chr15:79296589-79298449	chr15	+	79296639	79298045	True	NM_153815,NM_206839	chr15,chr15	-,+	RASGRF1,MORF4L1	7,-131518
chr4:42154838-42155306	chr4	+	42154898	42155355	True	NM_207406,NM_006345,NM_001159547	chr4,chr4,chr4	-,+,-	BEND4,SLC30A9,BEND4	-3,-162426,-3
chr13:49793600-49794051	chr13	+	49793790	49794100	True	NM_030925,NM_001507	chr13,chr13	-,+	CAB39L,MLNR	181685,373
chr1:153599245-153599477	chr1	+	153599315	153599479	True	NM_015607,NM_001024211,NM_001024212,NM_001024213,NM_006271,NM_001024210,NM_005979	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,-,+,-,-	CHTOP,S100A13,S100A13,S100A13,S100A1,S100A13,S100A13	7045,688,315,95,1393,7139,1286
chr9:114390744-114392695	chr9	+	114390933	114392656	True	NM_004125,NM_001015882,NR_037148,NR_034087	chr9,chr9,chr9,chr9	+,+,+,-	DNAJC25-GNG10,DNAJC25,DNAJC25,C9orf29	975,975,975,-15100
chr6:26216276-26216557	chr6	+	26216296	26216552	True	NM_003532,NM_003518,NM_021052	chr6,chr6,chr6	+,-,+	HIST1H3E,HIST1H2BG,HIST1H2AE	8830,370,595
chr4:1712700-1713331	chr4	+	1712922	1713374	True	NM_006527,NM_138385,NM_006342,NM_001127266	chr4,chr4,chr4,chr4	-,-,+,-	SLBP,TMEM129,TACC3,TMEM129	706,9760,9891,9760
chr11:67807762-67808131	chr11	+	67807808	67807882	True	NM_030930,NM_006019,NM_002496,NM_006053	chr11,chr11,chr11,chr11	-,+,+,+	UNC93B1,TCIRG1,NDUFS8,TCIRG1	-36215,-1397,-9775,2564
chr22:38899671-38901004	chr22	+	38899758	38900778	True	NM_006855,NM_001098504,NM_006386	chr22,chr22,chr22	+,-,-	KDELR3,DDX17,DDX17	-35740,1625,1625
chr14:75515467-75517193	chr14	+	75515471	75516593	True	NM_001042430,NM_014381,NM_001040108	chr14,chr14,chr14	+,-,-	FAM164C,MLH3,MLH3	19705,1692,1692
chr17:76341469-76341786	chr17	+	76341592	76341818	True	NM_003955,NM_024419	chr17,chr17	-,+	SOCS3,PGS1	14390,32916
chr7:139874491-139875294	chr7	+	139874700	139875288	True	NM_030647,NR_024451	chr7,chr7	-,+	JHDM1D,LOC100134229	1503,1772
chr5:37366292-37366663	chr5	+	37366292	37366371	True	NM_153485,NM_018034,NM_004298	chr5,chr5,chr5	-,+,-	NUP155,WDR70,NUP155	4883,13040,4573
chr5:70751959-70753233	chr5	+	70751989	70752862	True	NM_018429,NR_033968	chr5,chr5	+,-	BDP1,LOC100049076	-598,-196867
chr17:53849839-53851149	chr17	+	53849976	53851092	True	NM_001102402,NM_001099640	chr17,chr17	+,-	PCTP,TMEM100	-21561,-40494
chr10:124222958-124223857	chr10	+	124223179	124223775	True	NM_001099667,NM_001010912,NM_002775	chr10,chr10,chr10	+,-,+	ARMS2,C10orf120,HTRA1	-9051,235613,-2189
chr2:169659180-169659790	chr2	+	169659416	169659826	True	NM_020675,NM_001171632,NM_001039724,NM_052946	chr2,chr2,chr2,chr2	-,+,+,+	SPC25,NOSTRIN,NOSTRIN,NOSTRIN	87168,-375,-375,-368
chr7:50518563-50519318	chr7	+	50518672	50519344	True	NM_001042762,NM_022116,NR_033845	chr7,chr7,chr7	-,-,+	FIGNL1,FIGNL1,LOC100129427	-584,-584,80112
chr19:592785-593110	chr19	+	592872	593048	True	NM_001194,NM_005035	chr19,chr19	+,-	HCN2,POLRMT	-3030,40570
chr7:100808236-100808471	chr7	+	100808257	100808431	True	NM_003378,NM_001283	chr7,chr7	-,+	VGF,AP1S1	471,-10622
chr2:183361577-183362447	chr2	+	183361577	183362473	True	NM_018981,NM_005019	chr2,chr2	+,-	DNAJC10,PDE1A	218525,24830
chr1:205324905-205325686	chr1	+	205324934	205325655	True	NM_014858,NM_018203	chr1,chr1	+,-	TMCC2,KLHDC8A	-127948,435
chr22:21366939-21367282	chr22	+	21367149	21367215	True	NM_001159554,NR_003608,NM_005446	chr22,chr22,chr22	+,-,+	P2RX6,MGC16703,P2RX6	2226,1411,2248
chr10:102027916-102028169	chr10	+	102028045	102028169	True	NM_018294,NM_005063	chr10,chr10	-,+	CWF19L1,SCD	-608,78602
chr19:53793993-53794531	chr19	+	53793996	53794438	True	NM_001195187,NM_033341	chr19,chr19	+,-	LOC646508,BIRC8	-9236,487
chr2:30142543-30142830	chr2	+	30142567	30142852	True	NM_004304,NM_001127399	chr2,chr2	-,+	ALK,YPEL5	1675,226897
chr10:114208897-114209237	chr10	+	114208915	114209111	True	NM_022494,NM_145206	chr10,chr10	-,+	ZDHHC6,VTI1A	-2243,-2217
chr9:101016281-101017469	chr9	+	101016536	101017496	True	NM_018946,NM_018421	chr9,chr9	+,-	NANS,TBC1D2	-197628,557
chr19:37200498-37202064	chr19	+	37200756	37201871	True	NM_152603,NM_153257	chr19,chr19	+,-	ZNF567,ZNF461	-20514,-43017
chr11:89704835-89706716	chr11	+	89705685	89706607	True	NR_028346,NM_001136486	chr11,chr11	-,+	TRIM53,TRIM64	29120,-4077
chr11:89704835-89706716	chr11	-	89604238	89605159	False	NM_001164397,NR_028346	chr11,chr11	-,+	TRIM64B,TRIM53	4089,-29125
chr1:186796958-186798105	chr1	+	186797212	186798140	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-147653,-40
chr17:73519842-73520524	chr17	+	73520014	73520458	True	NM_001031803,NM_207346,NM_020753,NM_001015002,NM_004524	chr17,chr17,chr17,chr17,chr17	+,+,-,+,+	LLGL2,TSEN54,CASKIN2,LLGL2,LLGL2	1324,-7456,-8387,1324,1324
chr18:23808649-23809557	chr18	+	23808768	23809357	True	NM_005640,NM_005637	chr18,chr18	+,-	TAF4B,SS18	-2411,-138157
chr10:3113524-3114152	chr10	+	3113705	3114052	True	NM_002627,NM_014889	chr10,chr10	+,-	PFKP,PITRM1	-4016,101008
chrX:154441742-154443702	chrX	+	154441755	154443727	True	NM_003372,NM_171998	chrX,chrX	+,-	VBP1,RAB39B	973,50175
chr4:166323536-166323898	chr4	+	166323537	166323795	True	NR_030304,NR_026575	chr4,chr4	+,-	MIR578,GK3P	-16195,-122362
chr13:61987573-61987859	chr13	+	61987617	61987705	True	NM_022843,NM_001146070	chr13,chr13	-,+	PCDH20,TDRD3	2000,-1016244
chr11:47733592-47735299	chr11	+	47733652	47734131	True	NM_024783,NM_001164379	chr11,chr11	-,+	AGBL2,FAM180B	2231,-125485
chr6:131913606-131913951	chr6	+	131913675	131913997	True	NM_015979,NM_000045	chr6,chr6	-,+	MED23,ARG1	35416,-19368
chr2:130941493-130941830	chr2	+	130941513	130941733	True	NM_017951,NM_025029,NM_017751,NR_033232,NR_033231,NR_033230,NM_001171083	chr2,chr2,chr2,chr2,chr2,chr2,chr2	-,+,-,-,-,-,-	SMPD4,MZT2B,SMPD4,SMPD4,SMPD4,SMPD4,SMPD4	-2183,-2063,-2183,-2183,-2183,-1190,-2183
chr2:130941493-130941830	chr2	-	132248261	132248311	False	NM_001085365,NR_026922	chr2,chr2	-,+	MZT2A,LOC150776	1803,2074
chr17:36996436-36996914	chr17	+	36996517	36996721	True	NM_006148,NM_001080465	chr17,chr17	+,-	LASP1,C17orf98	29390,971
chr3:27495026-27496904	chr3	+	27495123	27496712	True	NM_003615,NM_182523	chr3,chr3	-,+	SLC4A7,CMC1	1591,786411
chr1:4048727-4048941	chr1	+	4048726	4048788	True	NR_024455,NM_207356	chr1,chr1	+,-	LOC100133612,C1orf174	-231809,-231869
chr12:5019002-5019349	chr12	+	5019001	5019335	True	NM_006422,NM_000217	chr12,chr12	-,+	AKAP3,KCNA1	-264658,21
chr14:96117216-96117566	chr14	+	96117217	96117615	True	NM_001098725,NR_028288	chr14,chr14	-,+	TCL1A,TCL6	62968,1
chr14:21114088-21114803	chr14	+	21114153	21114698	True	NM_001145,NM_001001968	chr14,chr14	+,-	ANG,OR6S1	37637,-4303
chr11:69588170-69588659	chr11	+	69588173	69588523	True	NM_002007,NM_053056	chr11,chr11	-,+	FGF4,CCND1	1698,-132351
chr5:90678712-90679024	chr5	+	90678714	90679050	True	NM_020801,NR_027435	chr5,chr5	-,+	ARRDC3,LOC100129716	149,-2601
chr11:76811663-76811965	chr11	+	76811836	76811931	True	NM_182833,NM_006189	chr11,chr11	-,+	GDPD4,OMP	186583,1954
chr5:169781440-169781696	chr5	+	169781458	169781674	True	NM_004137,NM_001034838	chr5,chr5	-,+	KCNMB1,KCNIP1	35014,-628
chr19:36979952-36980346	chr19	+	36979958	36980332	True	NM_001145344,NM_001145345,NM_001145343,NR_036504,NM_032838	chr19,chr19,chr19,chr19,chr19	-,-,-,+,-	ZNF566,ZNF566,ZNF566,LOC728752,ZNF566	181,181,181,196,55
chr19:47777683-47778069	chr19	+	47777713	47777905	True	NR_037675,NM_178511,NM_001127242	chr19,chr19,chr19	+,+,-	PRR24,PRR24,BBC3	-105,-161,-41690
chr5:122847425-122847742	chr5	+	122847490	122847786	True	NM_001044722,NM_001044723,NM_001031812,NM_153223,NM_004384	chr5,chr5,chr5,chr5,chr5	+,+,+,-,+	CSNK1G3,CSNK1G3,CSNK1G3,CEP120,CSNK1G3	6,6,6,-88204,6
chr2:73303550-73304004	chr2	+	73303659	73304023	True	NM_144579,NM_001134462	chr2,chr2	-,+	SFXN5,NOTO	-4694,125362
chr16:11371387-11372216	chr16	+	11371469	11372067	True	NM_005425,NM_021247,NM_152308,NM_002761,NM_002762	chr16,chr16,chr16,chr16,chr16	-,-,+,-,-	TNP2,PRM3,C16orf75,PRM1,PRM2	-8309,-4017,67243,3175,-1132
chr19:12150182-12150387	chr19	+	12150274	12150402	True	NM_001136501,NM_001080411	chr19,chr19	+,-	ZNF844,ZNF433	25143,-3749
chr7:131368531-131369526	chr7	+	131368536	131369403	True	NM_005397,NM_013255	chr7,chr7	-,+	PODXL,MKLN1	-127160,-355992
chr11:64902039-64902728	chr11	+	64902089	64902581	True	NM_032431,NM_172230,NR_037568	chr11,chr11,chr11	-,-,+	SYVN1,SYVN1,MRPL49	-86,-86,-12424
chr15:74906052-74906445	chr15	+	74906066	74906370	True	NM_001130028,NM_003992,NM_001142443	chr15,chr15,chr15	+,+,-	CLK3,CLK3,EDC3	964,-5404,82066
chr21:47573358-47573787	chr21	+	47573380	47573696	True	NM_001849,NM_006657,NM_206965	chr21,chr21,chr21	+,-,-	COL6A2,FTCD,FTCD	-55398,1835,1835
chr19:39786638-39787493	chr19	+	39786724	39787400	True	NM_172140,NM_020862	chr19,chr19	+,-	IL29,LRFN1	-65,18626
chr17:30595179-30596457	chr17	+	30595188	30596470	True	NM_022344,NM_138328	chr17,chr17	-,+	C17orf75,RHBDL3	72769,-2051
chr19:14202361-14202616	chr19	+	14202361	14202594	True	NR_024282,NM_138352	chr19,chr19	+,-	LOC113230,SAMD1	-18591,-1129
chr7:142723529-142724595	chr7	+	142723652	142724618	True	NM_001001667,NM_001001658	chr7,chr7	+,-	OR6V1,OR9A2	24819,-161
chrX:72988222-72988928	chrX	+	72988527	72988951	True	NR_001564,NR_003255	chrX,chrX	-,+	XIST,TSIX	83687,23088
chr15:85297819-85298310	chr15	+	85298001	85298129	True	NM_014630,NM_014300	chr15,chr15	+,-	ZNF592,SEC11A	-6247,-38327
chr14:55895006-55896283	chr14	+	55895108	55896007	True	NM_004986,NM_199047	chr14,chr14	+,-	KTN1,TBPL2	150917,11306
chr10:70714094-70715865	chr10	+	70715345	70715827	True	NM_004728,NM_152707	chr10,chr10	+,-	DDX21,SLC25A16	64,-428065
chr19:12036322-12037182	chr19	+	12036490	12037206	True	NM_144566,NM_001080411	chr19,chr19	+,-	ZNF700,ZNF433	-649,109369
chr19:12036322-12037182	chr19	+	11926405	11999248	False	NM_021915,NM_001080493	chr19,chr19	+,-	ZNF69,ZNF823	-579,-76645
chr9:102688938-102690056	chr9	+	102689145	102690100	True	NM_017919,NM_015051	chr9,chr9	+,-	STX17,ERP44	-20289,171283
chr1:247267700-247268104	chr1	+	247267818	247268017	True	NM_024804,NM_001142572,NM_207401,NM_173858	chr1,chr1,chr1,chr1	-,-,-,+	ZNF669,ZNF669,C1orf229,VN1R5	-144,-144,7753,151356
chr7:4172213-4172811	chr7	+	4172417	4172795	True	NM_020144,NR_027816	chr7,chr7	-,+	PAPOLB,SDK1	728880,-3159
chr21:15753017-15753833	chr21	+	15753217	15753873	True	NR_003087,NM_006948	chr21,chr21	+,-	ABCC13,HSPA13	-107148,1686
chr12:120033262-120033860	chr12	+	120033265	120033905	True	NR_031589,NM_001136534	chr12,chr12	-,+	MIR1178,TMEM233	117674,-2052
chr11:62538009-62538360	chr11	+	62538012	62538404	True	NM_002696,NM_006473,NM_024784	chr11,chr11,chr11	+,+,-	POLR2G,TAF6L,ZBTB3	-9055,470,-16356
chr19:45313731-45315208	chr19	+	45313857	45315251	True	NM_001013257,NM_005581,NR_027754	chr19,chr19,chr19	+,+,-	BCAM,BCAM,CEACAM22P	-1570,-1570,-253707
chr12:8665396-8666108	chr12	+	8665480	8666069	True	NM_014358,NM_080387	chr12,chr12	-,+	CLEC4E,CLEC4D	27551,66
chr19:17138544-17139255	chr19	+	17138843	17139029	True	NM_001130065,NM_015692	chr19,chr19	+,-	MYO9B,CPAMD8	47561,-1218
chr12:47170777-47172266	chr12	+	47171009	47172297	True	NM_138371,NM_001143824	chr12,chr12	+,-	FAM113B,SLC38A4	437754,47533
chr20:57225553-57226148	chr20	+	57225804	57226034	True	NR_037945,NR_037941,NR_037943,NR_037942,NM_153360,NM_001134773,NM_001134772,NM_003763,NM_001204868,NM_001001433	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,+,+,+,-,+,+,+,+,+	STX16-NPEPL1,STX16,STX16,STX16,APCDD1L,STX16,STX16,STX16,STX16,STX16	274,274,274,274,-135855,274,274,274,274,274
chr15:49169398-49170064	chr15	+	49169751	49170109	True	NM_014335,NM_014985	chr15,chr15	+,-	EID1,CEP152	180,-66408
chr8:21773120-21773657	chr8	+	21773130	21773610	True	NM_003974,NM_015024	chr8,chr8	-,+	DOK2,XPO7	-1925,3569
chr20:44640351-44640942	chr20	+	44640354	44640934	True	NM_004994,NM_001134771,NM_022095	chr20,chr20,chr20	+,+,-	MMP9,SLC12A5,ZNF335	-2858,9394,-39521
chr22:38382316-38383247	chr22	+	38382553	38383247	True	NM_006941,NM_021974	chr22,chr22	-,+	SOX10,POLR2F	-2014,-32930
chr9:71967193-71968087	chr9	+	71967347	71967715	True	NM_001163,NM_004816	chr9,chr9	-,+	APBA1,FAM189A2	319614,-23170
chr16:84148824-84150015	chr16	+	84148875	84150000	True	NM_003791,NM_178452	chr16,chr16	-,+	MBTPS1,LRRC50	568,28864
chr2:86853515-86854034	chr2	+	86853572	86853879	True	NM_022780,NM_001198952,NM_001198951,NM_005667	chr2,chr2,chr2,chr2	+,-,-,-	RMND5A,RNF103,RNF103,RNF103	93534,-2572,-2572,-2572
chr15:41625944-41627931	chr15	+	41626193	41626884	True	NM_007280,NM_018454,NM_001129897,NM_016359	chr15,chr15,chr15,chr15	-,+,+,+	OIP5,NUSAP1,NUSAP1,NUSAP1	-1374,-1326,-1326,-1326
chr4:15394057-15394264	chr4	+	15394112	15394276	True	NM_001193534,NM_001135171	chr4,chr4	-,+	FBXL5,C1QTNF7	262809,-17988
chr11:57520699-57521020	chr11	+	57520711	57521027	True	NM_001085468,NM_001145101,NM_001331,NM_001085459,NM_001085458,NM_001085462,NM_001085463,NM_001085460,NM_001085461,NM_001085466,NM_001085467,NM_001085464,NM_001085465,NM_001085469	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,-,+,+,+,+,+,+,+,+,+,+,+,+	CTNND1,BTBD18,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1	8206,-1458,8206,8206,8206,8206,8206,8206,8206,8206,8206,8206,8206,8206
chr6:3000621-3000866	chr6	+	3000650	3000722	True	NR_033884,NM_000904	chr6,chr6	-,+	LOC401233,NQO2	24333,-634
chr10:115999893-116001431	chr10	+	115999996	116001431	True	NM_198496,NM_018017	chr10,chr10	+,-	VWA2,C10orf118	-1029,-65632
chr14:92266685-92267986	chr14	+	92266685	92267732	True	NM_001128595,NM_017437	chr14,chr14	-,+	TC2N,CPSF2	35175,320565
chrX:152600372-152602275	chrX	+	152600879	152602294	True	NM_001080485,NM_080701	chrX,chrX	+,-	ZNF275,TREX2	-1317,109704
chr16:223082-223313	chr16	+	223148	223328	True	NM_001077350,NM_000558,NM_000517,NM_001003938,NM_005331	chr16,chr16,chr16,chr16,chr16	-,+,+,+,+	NPRL3,HBA1,HBA2,HBM,HBQ1	-34476,3350,-353,-7226,7004
chr16:223082-223313	chr16	+	226952	227132	False	NM_001077350,NM_000558,NM_000517,NM_005331	chr16,chr16,chr16,chr16	-,+,+,+	NPRL3,HBA1,HBA2,HBQ1	-38280,-324,-4157,3200
chr1:27974726-27975257	chr1	+	27974763	27975297	True	NM_001143912,NM_005248	chr1,chr1	+,-	FAM76A,FGR	77192,-13036
chr12:57854735-57855046	chr12	+	57854889	57855049	True	NM_001167609,NM_001080156,NM_031479,NM_005269,NM_001160045	chr12,chr12,chr12,chr12,chr12	+,-,+,+,+	GLI1,ARHGAP9,INHBE,GLI1,GLI1	-1006,16729,-5844,-1006,-1022
chr19:17634258-17634656	chr19	+	17634257	17634683	True	NM_001098524,NM_173544,NM_138454	chr19,chr19,chr19	+,+,-	FAM129C,FAM129C,NXNL1	-198,-198,-62532
chr8:29386802-29387769	chr8	+	29386903	29387737	True	NR_024473,NM_001394	chr8,chr8	+,-	LOC286135,DUSP4	391291,-178636
chr1:161034110-161035515	chr1	+	161034145	161035157	True	NR_033385,NM_001025598,NM_181720	chr1,chr1,chr1	+,-,-	KLHDC9,ARHGAP30,ARHGAP30	32993,4660,4660
chr7:120493306-120493648	chr7	+	120493435	120493658	True	NM_198267,NM_012338	chr7,chr7	+,-	ING3,TSPAN12	97158,4575
chr2:88663488-88664439	chr2	+	88663859	88664465	True	NM_152670,NM_001135649	chr2,chr2	+,-	C2orf51,FOXI3	159703,87638
chr5:93976730-93977586	chr5	+	93976809	93977568	True	NM_173665,NM_032290	chr5,chr5	-,+	KIAA0825,ANKRD32	-22500,-22476
chr19:35418201-35419456	chr19	+	35418210	35419350	True	NM_001099438,NM_175872,NR_024018,NM_194325,NM_001099437	chr19,chr19,chr19,chr19,chr19	+,-,+,+,+	ZNF30,ZNF792,ZNF30,ZNF30,ZNF30	-454,35661,-454,-454,-454
chr11:117695478-117696454	chr11	+	117695720	117696502	True	NM_001680,NM_001558,NM_021603	chr11,chr11,chr11	-,+,-	FXYD2,IL10RA,FXYD2	-261,160603,2355
chr1:156713740-156714308	chr1	+	156713777	156714307	True	NM_015997,NM_001126051,NM_001126050,NM_004494,NM_145729,NM_024540	chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,-,-,-	RRNAD1,HDGF,HDGF,HDGF,MRPL24,MRPL24	-15565,7767,7983,7286,-2854,-2854
chr5:118324842-118325305	chr5	+	118324868	118325304	True	NM_173666,NR_036263	chr5,chr5	-,+	DTWD2,MIR1244-3	-628,-14639
chr22:43340909-43341205	chr22	+	43341151	43341235	True	NM_001197,NM_007229	chr22,chr22	+,-	BIK,PACSIN2	165521,1862
chr14:58894298-58895114	chr14	+	58894307	58895133	True	NM_012460,NM_014749	chr14,chr14	-,+	TIMM9,KIAA0586	-75,-34
chr15:40599400-40599738	chr15	+	40599503	40599711	True	NM_004573,NM_001145643	chr15,chr15	-,+	PLCB2,PHGR1	513,43522
chr15:28344713-28346195	chr15	+	28344756	28346114	True	NM_000275,NR_033351	chr15,chr15	-,+	OCA2,GOLGA8F	-298,277669
chrX:24172806-24174172	chrX	+	24173006	24173964	True	NM_030624,NM_003410,NM_001178086,NM_001178095,NM_001178085,NM_001178084	chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,+	KLHL15,ZFX,ZFX,ZFX,ZFX,ZFX	-127703,-5211,-5303,-5303,-5219,-5224
chr17:42975881-42976772	chr17	+	42975882	42976638	True	NM_001142605,NM_213607,NM_004247	chr17,chr17,chr17	-,+,-	EFTUD2,CCDC103,EFTUD2	405,515,405
chr6:52925306-52925684	chr6	+	52925345	52925699	True	NM_014920,NM_033481,NM_033480,NM_016513	chr6,chr6,chr6,chr6	-,+,+,-	ICK,FBXO9,FBXO9,ICK	955,4096,4557,955
chr19:45278853-45279123	chr19	+	45279014	45279104	True	NM_012116,NR_027754,NM_001130852	chr19,chr19,chr19	+,-,+	CBLC,CEACAM22P,CBLC	2021,-218864,2021
chr16:70680344-70680586	chr16	+	70680382	70680506	True	NM_001172772,NM_138383	chr16,chr16	+,-	IL34,MTSS1L	-22538,39498
chr19:10943956-10945314	chr19	+	10943979	10945073	True	NM_001136482,NM_006858	chr19,chr19	+,-	C19orf38,TMED1	14032,1960
chr19:36157280-36157531	chr19	+	36157351	36157567	True	NM_024660,NM_007000	chr19,chr19	-,+	IGFLR1,UPK1A	75834,147
chr9:33751141-33753078	chr9	+	33751574	33753000	True	NM_001197097,NR_023917,NM_007343,NM_001197098	chr9,chr9,chr9,chr9	+,-,+,+	PRSS3,PTENP1,PRSS3,PRSS3	-1161,-74156,-1161,-806
chr7:134849631-134850720	chr7	+	134849733	134850543	True	NM_018295,NR_024186,NR_024185,NM_024033	chr7,chr7,chr7,chr7	+,-,-,-	TMEM140,C7orf49,C7orf49,C7orf49	-17018,5039,5039,5039
chr12:8757839-8759592	chr12	+	8758115	8759535	True	NM_020734,NM_020661,NM_080387	chr12,chr12,chr12	+,-,+	RIMKLB,AICDA,CLEC4D	90982,5957,-92030
chr9:116209464-116210963	chr9	+	116209985	116211002	True	NM_144488,NM_017443	chr9,chr9	+,-	RGS3,POLE3	-3039,-36956
chr9:130542227-130542887	chr9	+	130542381	130542839	True	NM_005489,NR_036055,NM_170600,NM_001261	chr9,chr9,chr9,chr9	-,+,-,+	SH2D3C,MIR2861,SH2D3C,CDK9	-8760,5357,-1333,5465
chr5:78917301-78917843	chr5	+	78917642	78917829	True	NM_001114393,NM_004272,NM_001114394,NM_173797	chr5,chr5,chr5,chr5	+,-,+,+	PAPD4,HOMER1,PAPD4,PAPD4	-9461,-107942,-9461,-9461
chr15:76029259-76029843	chr15	+	76029261	76029859	True	NM_175881,NR_024595	chr15,chr15	+,-	ODF3L1,DNM1P35	-12993,2693
chr22:37680871-37681260	chr22	+	37680920	37681237	True	NM_013385,NM_002872	chr22,chr22	+,-	CYTH4,RAC2	-2476,-40615
chr4:104076681-104076926	chr4	+	104076748	104076886	True	NM_001813,NM_001008388	chr4,chr4	-,+	CENPE,CISD2	42742,-286672
chr21:35009673-35010609	chr21	+	35009819	35010485	True	NM_145858,NM_003024,NM_001001132	chr21,chr21,chr21	-,+,+	CRYZL1,ITSN1,ITSN1	3725,4298,4298
chr1:47779155-47779754	chr1	+	47779159	47779530	True	NM_001136140,NM_001048166,NM_003035	chr1,chr1,chr1	+,-,-	CMPK1,STIL,STIL	19938,346,346
chr7:141490497-141490796	chr7	+	141490521	141490789	True	NM_018980,NM_001008270	chr7,chr7	+,-	TAS2R5,PRSS37	-555,50482
chr2:34270640-34271438	chr2	+	34270644	34271486	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-531763,-317360
chr8:17780395-17780631	chr8	+	17780412	17780648	True	NM_006197,NM_201552	chr8,chr8	+,-	PCM1,FGL1	-97,-27365
chr6:118968683-118969186	chr6	+	118968857	118969006	True	NM_001042475,NM_206921,NM_002667	chr6,chr6,chr6	-,-,+	C6orf204,C6orf204,PLN	4075,4075,-99475
chr14:74183699-74184663	chr14	+	74183770	74184503	True	NM_031427,NM_006029	chr14,chr14	+,-	DNAL1,PNMA1	-72253,-2642
chr1:155660789-155661662	chr1	+	155661032	155661541	True	NM_001199849,NM_001198903,NM_004632,NM_018253,NM_001198902,NM_033657,NM_001199851,NM_001199850,NM_139121,NM_001198900,NM_001198901,NM_139118,NM_139119,NM_001198904,NM_001198905,NM_001198906	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,-,+,-,-,+,+,+,-,-,-,-,-,-,-,-	DAP3,YY1AP1,DAP3,YY1AP1,YY1AP1,DAP3,DAP3,DAP3,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1	-2202,-2585,-2199,-2464,-2517,-2199,-2202,-2202,-2268,-2464,-2213,-2209,-2467,-2585,-2464,-2209
chr20:54581345-54581632	chr20	+	54581344	54581670	True	NM_080617,NM_019888	chr20,chr20	-,+	CBLN4,MC3R	-1332,242117
chr19:12805077-12805731	chr19	+	12805170	12805530	True	NM_032301,NM_032332	chr19,chr19	-,+	FBXW9,WDR83	1975,-24706
chr5:76253502-76253906	chr5	+	76253573	76253715	True	NR_003014,NM_001882	chr5,chr5	-,+	SNORA47,CRHBP	122737,-4949
chr12:104610284-104610788	chr12	+	104610284	104610774	True	NM_006166,NM_001093771	chr12,chr12	-,+	NFYB,TXNRD1	-78244,-776
chr20:30777228-30777492	chr20	+	30777245	30777535	True	NR_002781,NM_172236	chr20,chr20	-,+	TSPY26P,POFUT1	678,18160
chrY:22630118-22631137	chrY	+	22630207	22631151	True	NM_004681,NR_001542	chrY,chrY	+,-	EIF1AY,TTTY10	106459,50013
chr1:171104547-171106317	chr1	+	171104605	171106187	True	NR_002601,NR_031627	chr1,chr1	+,-	FMO6P,MIR1295	691,-33658
chr2:165793965-165794563	chr2	+	165794049	165794606	True	NM_001040142,NM_001199148	chr2,chr2	+,-	SCN2A,SLC38A11	301305,17479
chr4:66533347-66534038	chr4	+	66533402	66534014	True	NR_034138,NM_182472,NM_004439	chr4,chr4,chr4	+,-,-	LOC100144602,EPHA5,EPHA5	1664,1689,1689
chr13:50267124-50268366	chr13	+	50267519	50268381	True	NM_032565,NM_138450	chr13,chr13	-,+	EBPL,ARL11	-1896,-65148
chr12:25223706-25225061	chr12	+	25223954	25224827	True	NM_001101339,NM_006152	chr12,chr12	-,+	C12orf77,LRMP	-73581,-18836
chr19:38894372-38894826	chr19	+	38894371	38894875	True	NM_152657,NM_174905	chr19,chr19	-,+	GGN,FAM98C	-15703,-647
chr17:30456626-30458405	chr17	+	30457125	30458238	True	NM_001033566,NR_002222	chr17,chr17	+,-	RHOT1,ARGFXP2	11234,20402
chr11:65362263-65363061	chr11	+	65362488	65362962	True	NM_001099409,NM_033347,NM_005714,NM_033348,NM_033455	chr11,chr11,chr11,chr11,chr11	+,-,-,-,-	EHBP1L1,KCNK7,KCNK7,KCNK7,KCNK7	-19030,555,555,555,555
chr15:20773451-20774584	chr15	+	20773548	20774378	True	NM_001145004,NR_027411	chr15,chr15	-,+	GOLGA6L6,GOLGA8C	-26434,-5925
chr15:20773451-20774584	chr15	+	28629656	28630508	False	NM_004667,NR_033351,NR_033353	chr15,chr15,chr15	-,+,+	HERC2,GOLGA8F,GOLGA8G	-62361,-5923,-5923
chr15:20773451-20774584	chr15	-	28771419	28772270	False	NR_036443,NR_033351,NR_033353	chr15,chr15,chr15	+,-,-	HERC2P9,GOLGA8F,GOLGA8G	127317,5923,5923
chr15:20773451-20774584	chr15	-	22709001	22709093	False	NR_027407,NM_001001413	chr15,chr15	-,+	GOLGA8DP,GOLGA6L1	6727,27152
chr15:20773451-20774584	chr15	+	23606513	23606584	False	NR_002824,NR_033350	chr15,chr15	-,+	HERC2P2,GOLGA8E	-228254,-171515
chr15:20773451-20774584	chr15	+	23440946	23441776	False	NR_002824,NR_033350	chr15,chr15	-,+	HERC2P2,GOLGA8E	-62687,-5927
chr17:75283178-75283429	chr17	+	75283199	75283273	True	NM_001113492,NM_001113491,NR_036200	chr17,chr17,chr17	+,+,-	SEPT9,SEPT9,MIR4316	699,-5758,109913
chr19:4830383-4830729	chr19	+	4830515	4830733	True	NM_182919,NM_018708	chr19,chr19	-,+	TICAM1,FEM1A	1054,-38840
chr10:76818433-76818795	chr10	+	76818450	76818790	True	NM_001003892,NM_001174156	chr10,chr10	-,+	DUPD1,SAMD8	-178,52602
chr5:744664-745509	chr5	+	745016	745411	True	NM_018140,NM_007030	chr5,chr5	+,-	CEP72,TPPP	-132669,-51506
chr5:744664-745509	chr5	+	837252	837547	False	NM_001166260,NM_024786	chr5,chr5	+,-	TRIP13,ZDHHC11	55421,13611
chr7:73623635-73624146	chr7	+	73623665	73623848	True	NM_032463,NM_032464,NM_014146,NM_002914	chr7,chr7,chr7,chr7	+,+,+,-	LAT2,LAT2,LAT2,RFC2	238,238,238,44943
chr12:79339560-79340357	chr12	+	79339596	79340161	True	NM_005639,NM_002583	chr12,chr12	+,-	SYT1,PAWR	-81198,744690
chr20:37110135-37111283	chr20	+	37110468	37111067	True	NM_020336,NR_027241	chr20,chr20	+,-	RALGAPB,LOC388796	-9046,-46450
chr1:39805641-39806864	chr1	+	39805641	39806609	True	NM_033044,NR_003929	chr1,chr1	+,-	MACF1,PPIEL	-8883,218811
chr1:231377276-231379159	chr1	+	231377329	231378972	True	NM_152379,NM_014236	chr1,chr1	-,+	C1orf131,GNPAT	-405,-461
chr1:39458581-39459057	chr1	+	39458641	39458944	True	NM_024595,NM_001136275,NM_017821	chr1,chr1,chr1	+,+,-	AKIRIN1,AKIRIN1,RHBDL2	-1776,-1776,-51185
chr12:45440593-45442365	chr12	+	45440864	45442161	True	NM_001004329,NM_001025356	chr12,chr12	-,+	DBX2,ANO6	2777,167608
chr19:44717290-44717873	chr19	+	44717301	44717901	True	NM_004234,NM_182490	chr19,chr19	-,+	ZNF235,ZNF227	91327,-661
chr22:24131195-24132182	chr22	+	24131459	24132219	True	NM_213720,NM_003073,NM_001007468	chr22,chr22,chr22	-,+,+	CHCHD10,SMARCB1,SMARCB1	-21318,-2360,-2360
chr12:12869368-12869766	chr12	+	12869383	12869743	True	NM_004064,NM_006143,NM_001130415	chr12,chr12,chr12	+,-,+	CDKN1B,GPR19,APOLD1	558,-20262,9107
chr14:75518269-75518871	chr14	+	75518268	75518615	True	NM_001042430,NM_014381,NM_001040108	chr14,chr14,chr14	+,-,-	FAM164C,MLH3,MLH3	17683,-33,-33
chr1:185709980-185711126	chr1	+	185710295	185711163	True	NM_006469,NM_031935	chr1,chr1	-,+	IVNS1ABP,HMCN1	-423834,-6670
chr3:178290888-178292163	chr3	+	178291181	178292184	True	NM_022470,NM_005832	chr3,chr3	-,+	ZMAT3,KCNMB2	497524,-14618
chr2:161351390-161352690	chr2	+	161351593	161352452	True	NM_002897,NM_133484,NM_016836	chr2,chr2,chr2	-,+,-	RBMS1,TANK,RBMS1	-1275,641013,-1275
chr2:77746183-77746746	chr2	+	77746234	77746774	True	NM_024993,NM_001134745,NM_198448	chr2,chr2,chr2	-,-,+	LRRTM4,LRRTM4,REG3G	2778,2778,1506051
chr7:97618052-97618486	chr7	+	97618056	97618246	True	NM_006188,NM_014916	chr7,chr7	-,+	OCM2,LMTK2	1228,117950
chr1:175887096-175889076	chr1	+	175887586	175889133	True	NM_021936,NR_002998	chr1,chr1	+,-	PAPPA2,SCARNA3	543173,48605
chr9:115507684-115508620	chr9	+	115508021	115508589	True	NM_001012994,NM_021218	chr9,chr9	+,-	SNX30,C9orf80	4544,-27634
chr2:74755897-74756342	chr2	+	74756244	74756328	True	NM_133637,NM_181575,NM_145074,NM_013247	chr2,chr2,chr2,chr2	-,-,+,+	DQX1,AUP1,HTRA2,HTRA2	-2836,696,203,203
chr2:198570235-198570511	chr2	+	198570237	198570549	True	NM_144629,NM_138395	chr2,chr2	-,+	RFTN2,MARS2	-29653,-260
chr1:14677260-14677976	chr1	+	14677267	14677699	True	NM_015209,NR_027136	chr1,chr1	+,-	KAZN,C1orf126	247513,801311
chr1:110952960-110953943	chr1	+	110953552	110953724	True	NM_032414,NM_006402	chr1,chr1	+,-	PROK1,HBXIP	40063,-3006
chr2:61990562-61990948	chr2	+	61990646	61990983	True	NM_001201543,NM_152516	chr2,chr2	-,+	FAM161A,COMMD1	90345,141819
chr5:93917899-93918784	chr5	+	93917942	93918649	True	NM_001145678,NM_032290	chr5,chr5	-,+	KIAA0825,ANKRD32	35719,35741
chr16:1401060-1401498	chr16	+	1401059	1401349	True	NM_032520,NM_001001410	chr16,chr16	+,-	GNPTG,C16orf42	550,574
chr17:37847688-37848265	chr17	+	37847875	37848081	True	NM_004448,NM_001005862,NM_033419	chr17,chr17,chr17	+,+,-	ERBB2,ERBB2,PGAP3	8172,-3539,-3565
chr5:140536702-140537193	chr5	+	140536701	140536920	True	NM_018939,NM_031947,NR_001280	chr5,chr5,chr5	+,-,+	PCDHB6,SLC25A2,PCDHB17	-6913,146742,-1172
chr14:52116708-52117204	chr14	+	52116744	52117113	True	NR_037676,NM_152330	chr14,chr14	-,+	C14orf82,FRMD6	1410,1462
chr14:24682549-24682795	chr14	+	24682610	24682820	True	NM_174944,NM_001199821,NM_001199822,NM_014169,NM_001184739,NM_138476	chr14,chr14,chr14,chr14,chr14,chr14	+,-,-,-,+,-	TSSK4,MDP1,MDP1,CHMP4A,TSSK4,MDP1	-7735,2506,2506,266,-7735,2506
chr11:61128082-61128304	chr11	+	61128111	61128173	True	NM_001161452,NM_016464,NM_153611,NM_001161454,NR_028473	chr11,chr11,chr11,chr11,chr11	-,+,-,-,+	CYBASC3,TMEM138,CYBASC3,CYBASC3,TMEM138	-3750,1299,1632,1632,1299
chrX:48827826-48828280	chrX	+	48827886	48827984	True	NM_001167992,NM_004979	chrX,chrX	+,-	PQBP1,KCND1	-72162,317
chr2:232320124-232320740	chr2	+	232320214	232320784	True	NM_005381,NR_002921,NR_004398,NR_002908,NM_145236	chr2,chr2,chr2,chr2,chr2	-,-,-,-,+	NCL,SNORA75,SNORD82,SNORD20,B3GNT7	8471,67,4419,500,-59931
chr12:8325214-8326867	chr12	+	8325261	8326504	True	NM_001004328,NR_026788,NR_036440	chr12,chr12,chr12	+,+,-	ZNF705A,FAM66C,POU5F1P3	-171,6300,-37813
chr12:8325214-8326867	chr11	-	71531969	71532027	False	NR_029192,NM_001002035	chr11,chr11	-,+	LOC100133315,DEFB108B	107524,12218
chr12:8325214-8326867	chr4	-	9390155	9390213	False	NR_031688,NR_027279	chr4,chr4	-,+	MIR548I2,USP17L6P	167782,-20614
chr12:8325214-8326867	chr8	+	11966197	11966255	False	NR_003275,NR_027425	chr8,chr8	-,+	LOC392196,FAM66D	20607,7035
chr12:8325214-8326867	chr8	+	12212437	12212495	False	NM_001195257,NR_026789	chr8,chr8	-,+	LOC100133267,FAM66A	-36612,7032
chr17:5136465-5136758	chr17	+	5136525	5136679	True	NM_207103,NR_034082	chr17,chr17	-,+	C17orf87,LOC100130950	1454,-41197
chr11:73881552-73881929	chr11	+	73881611	73881871	True	NM_015531,NM_016147	chr11,chr11	-,+	C2CD3,PPME1	243,496
chr3:127542761-127543552	chr3	+	127542868	127543579	True	NM_207335,NM_001003794,NM_007283	chr3,chr3,chr3	+,-,-	KBTBD12,MGLL,MGLL	98322,-817,-1167
chr12:113862699-113863354	chr12	+	113862830	113863402	True	NM_138432,NM_006843	chr12,chr12	+,-	SDSL,SDS	-2666,-21138
chr10:94336634-94337258	chr10	+	94336653	94336917	True	NM_004969,NM_004523	chr10,chr10	-,+	IDE,KIF11	-2801,15907
chr20:2851989-2852738	chr20	+	2851992	2852692	True	NM_002836,NM_022760,NM_080840	chr20,chr20,chr20	+,-,+	PTPRA,FAM113A,PTPRA	-7202,-30660,1449
chr10:51547308-51549128	chr10	+	51547415	51548975	True	NM_001077685,NM_138634,NM_002443	chr10,chr10,chr10	-,+,+	AGAP7,MSMB,MSMB	-61088,577,577
chr14:93782388-93783644	chr14	+	93783056	93783693	True	NM_020818,NM_001002860	chr14,chr14	+,-	KIAA1409,BTBD7	15871,15743
chr16:2878843-2879092	chr16	+	2878842	2879138	True	NR_026864,NM_145252	chr16,chr16	-,+	PRSS30P,ZG16B	13664,1034
chr16:28942933-28943303	chr16	+	28942957	28943128	True	NM_024816,NM_001770,NM_001178098	chr16,chr16,chr16	-,+,+	RABEP2,CD19,CD19	-6425,131,131
chr3:48595657-48597015	chr3	+	48595971	48597045	True	NM_033629,NM_004567,NM_033199	chr3,chr3,chr3	+,-,-	TREX1,PFKFB4,UCN2	-88793,-1744,4206
chr11:4128415-4129548	chr11	+	4128527	4129520	True	NM_001005161,NM_001033	chr11,chr11	-,+	OR52B4,RRM1	260153,-12655
chr16:57704343-57705200	chr16	+	57704344	57705185	True	NM_001130099,NM_170776	chr16,chr16	-,+	KIFC3,GPR97	126803,-2238
chr3:42632633-42632849	chr3	+	42632632	42632702	True	NM_005385,NM_004206,NM_001201572,NM_016305,NM_032970,NM_001201584	chr3,chr3,chr3,chr3,chr3,chr3	+,-,-,+,-,-	NKTR,SEC22C,SEC22C,SS18L2,SEC22C,SEC22C	9444,-9112,9920,-385,-9112,-9112
chr20:37554773-37555046	chr20	+	37554853	37555077	True	NM_030919,NR_027124	chr20,chr20	+,-	FAM83D,LOC339568	51,298364
chr18:53664374-53665168	chr18	+	53664397	53665190	True	NM_003199,NM_015285	chr18,chr18	-,+	TCF4,WDR7	-408537,653425
chr7:145813987-145815265	chr7	+	145814098	145815012	True	NR_031645,NM_014141	chr7,chr7	-,+	MIR548F4,CNTNAP2	1260263,-696
chr18:12695001-12696308	chr18	+	12695036	12696123	True	NM_020232,NM_024899	chr18,chr18	+,-	PSMG2,CEP76	6863,6639
chr17:60219227-60221046	chr17	+	60219269	60221086	True	NM_001144933,NM_005121	chr17,chr17	+,-	EFCAB3,MED13	226492,-76626
chr6:160768725-160768926	chr6	+	160768740	160768806	True	NM_003058,NM_021977	chr6,chr6	-,+	SLC22A2,SLC22A3	-88777,618
chr17:42733904-42734223	chr17	+	42734021	42734261	True	NM_001099225,NM_001145080	chr17,chr17	-,+	CCDC43,C17orf104	32954,-310
chr10:135053767-135054206	chr10	+	135053800	135053926	True	NR_030170,NM_014468	chr10,chr10	-,+	MIR202,VENTX	7248,-2443
chr16:56699965-56701129	chr16	+	56700321	56701126	True	NM_005949,NR_003669,NM_005950,NM_005951	chr16,chr16,chr16,chr16	+,+,-,+	MT1F,MT1IP,MT1G,MT1H	-8517,8522,901,2599
chr17:31619432-31619635	chr17	+	31619469	31619683	True	NM_183377,NM_173847	chr17,chr17	-,+	ACCN1,SPACA3	373,-300638
chr8:122650672-122651943	chr8	+	122650671	122651974	True	NR_002835,NM_005328	chr8,chr8	+,-	HAS2-AS1,HAS2	120,1706
chr8:56366264-56366561	chr8	+	56366275	56366589	True	NR_027765,NM_024831	chr8,chr8	-,+	SBF1P1,TGS1	1342,319201
chr22:37678870-37679184	chr22	+	37678874	37679156	True	NM_013385,NM_002872	chr22,chr22	+,-	CYTH4,RAC2	-433,-38569
chrX:134846985-134847653	chrX	+	134847000	134847444	True	NM_001017417,NM_001017436	chrX,chrX	+,-	CT45A1,CT45A4	106,89341
chr3:122107818-122108907	chr3	+	122107976	122108809	True	NM_014367,NM_001017928	chr3,chr3	+,-	FAM162A,CCDC58	-5013,-5902
chr5:96343017-96344459	chr5	+	96343023	96343912	True	NM_153234,NM_175920	chr5,chr5	-,+	LIX1,LNPEP	134667,-48932
chr19:39305886-39306216	chr19	+	39305923	39306193	True	NM_006149,NM_001042507	chr19,chr19	-,+	LGALS4,LGALS7B	-2183,-26124
chr1:78254947-78256042	chr1	+	78255395	78255943	True	NM_201626,NM_198549	chr1,chr1	-,+	USP33,FAM73A	-29858,-10144
chr12:11802538-11802745	chr12	+	11802544	11802667	True	NM_001987,NM_006248	chr12,chr12	+,-	ETV6,PRB2	120,-254046
chr15:28627928-28629257	chr15	+	28628509	28628587	True	NM_004667,NR_033351,NR_033353	chr15,chr15,chr15	-,+,+	HERC2,GOLGA8F,GOLGA8G	-61214,-4776,-4776
chr15:28627928-28629257	chr15	+	23604592	23604670	False	NR_002824,NR_033350	chr15,chr15	-,+	HERC2P2,GOLGA8E	-226333,-169573
chr15:28627928-28629257	chr15	-	28773339	28773417	False	NR_036443,NR_033351,NR_033353	chr15,chr15,chr15	+,-,-	HERC2P9,GOLGA8F,GOLGA8G	126170,4776,4776
chr15:94942315-94942716	chr15	+	94942321	94942667	True	NM_001159644,NR_034095	chr15,chr15	+,-	MCTP2,LOC400456	-43208,927712
chr17:67037767-67038014	chr17	+	67037970	67038056	True	NM_080283,NM_002758	chr17,chr17	-,+	ABCA9,MAP2K6	19136,372781
chr19:10047440-10047772	chr19	+	10047680	10047752	True	NM_058164,NM_015725	chr19,chr19	-,+	OLFM2,RDH8	-610,76172
chr11:1853099-1853542	chr11	+	1853192	1853581	True	NM_001145829,NR_036185,NM_138567,NM_001145841,NM_003282	chr11,chr11,chr11,chr11,chr11	+,-,+,+,+	TNNI2,MIR4298,SYT8,TNNI2,TNNI2	7137,27235,2092,7850,6651
chr2:15681706-15681914	chr2	+	15681705	15681809	True	NM_004939,NM_015909	chr2,chr2	+,-	DDX1,NBAS	49960,19703
chr7:96642674-96644278	chr7	+	96642731	96644111	True	NM_005222,NR_015448	chr7,chr7	+,-	DLX6,DLX6-AS1	-7492,38
chr17:58203695-58204294	chr17	+	58203712	58204144	True	NM_000717,NR_027408	chr17,chr17	+,-	CA4,LOC653653	23157,-23432
chr17:58203695-58204294	chr17	-	36349667	36349724	False	NM_032258,NM_001123391	chr17,chr17	-,-	TBC1D3F,TBC1D3	-1001,-1001
chr17:58203695-58204294	chr17	-	60353702	60354122	False	NR_027486,NM_001144933	chr17,chr17	-,+	TBC1D3P2,EFCAB3	-686,93456
chr17:58203695-58204294	chr17	-	58097123	58097555	False	NM_003161,NR_002924	chr17,chr17	+,-	RPS6KB1,DHX40P1	-126731,-787
chr21:41028290-41030153	chr21	+	41028518	41030072	True	NR_026543,NM_006057,NM_033171,NM_033170,NM_033173,NM_033172	chr21,chr21,chr21,chr21,chr21,chr21	-,+,+,+,+,+	C21orf88,B3GALT5,B3GALT5,B3GALT5,B3GALT5,B3GALT5	-43769,187,187,187,187,187
chr4:159941084-159941701	chr4	+	159941439	159941660	True	NM_152543,NM_014247	chr4,chr4	-,+	C4orf45,RAPGEF2	14724,247337
chr4:77869130-77869439	chr4	+	77869129	77869381	True	NM_001029870,NM_018243	chr4,chr4	-,+	ANKRD56,SEPT11	-50127,1513
chr17:74870519-74870735	chr17	+	74870617	74870689	True	NM_144677,NM_198955,NM_001199172,NR_036608	chr17,chr17,chr17,chr17	+,+,+,-	MGAT5B,MGAT5B,MGAT5B,SRSF2	-5870,-1939,-5870,-137124
chr8:142240238-142240566	chr8	+	142240239	142240573	True	NM_014957,NM_001080431	chr8,chr8	+,-	DENND3,SLC45A4	-101570,-1566
chr11:123066177-123066558	chr11	+	123066180	123066526	True	NR_027288,NM_024769	chr11,chr11	+,-	LOC341056,CLMP	-177957,-173
chr3:49069402-49070094	chr3	+	49069412	49070128	True	NM_199070,NM_000884	chr3,chr3	+,-	NDUFAF3,IMPDH2	-10389,-2537
chr21:44847844-44848138	chr21	+	44847877	44848187	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	21716,-875
chr10:134120048-134120367	chr10	+	134120047	134120321	True	NM_001143758,NM_173575	chr10,chr10	+,-	LRRC27,STK32C	25292,1206
chr13:33002969-33003737	chr13	+	33002975	33003644	True	NM_000059,NM_052818,NM_001079691	chr13,chr13,chr13	+,-,-	BRCA2,N4BP2L1,N4BP2L1	-113416,-660,-660
chr17:41985612-41985822	chr17	+	41985625	41985825	True	NR_026770,NM_005374	chr17,chr17	+,-	C17orf88,MPP2	8750,-512
chr2:48982918-48983143	chr2	+	48982959	48983110	True	NM_000233,NM_006872	chr2,chr2	-,+	LHCGR,GTF2A1L	-79,-138073
chr1:206859061-206859275	chr1	+	206859123	206859322	True	NM_032960,NM_004759,NM_006893	chr1,chr1,chr1	+,+,-	MAPKAPK2,MAPKAPK2,EIF2D	-885,-885,-73219
chr3:121732250-121733686	chr3	+	121732300	121733594	True	NM_175924,NM_175862,NM_001199800,NM_001199799	chr3,chr3,chr3,chr3	-,+,-,-	ILDR1,CD86,ILDR1,ILDR1	7585,40626,7585,7585
chr12:117316965-117317399	chr12	+	117317004	117317264	True	NM_003806,NM_012174	chr12,chr12	-,+	HRK,FBXW8	2018,31496
chr16:12142731-12143065	chr16	+	12142773	12143035	True	NM_001080530,NM_001130007	chr16,chr16	+,-	SNX29,GSPT1	3019,-132254
chr16:12142731-12143065	chr16	+	21393992	21394254	False	NR_026675,NM_130464	chr16,chr16	+,-	NCRNA00169,NPIPL3	-81874,42454
chr16:12142731-12143065	chr16	+	29373112	29373374	False	NR_002939,NM_001031827	chr16,chr16	+,-	RUNDC2C,BOLA2	-70623,92961
chr1:45989662-45990356	chr1	+	45989960	45990207	True	NM_181696,NM_002574,NM_001202431,NM_015506,NM_181697	chr1,chr1,chr1,chr1,chr1	-,-,-,+,-	PRDX1,PRDX1,PRDX1,MMACHC,PRDX1	-2350,-2350,-1398,-24158,-2350
chr3:133952786-133953955	chr3	+	133953032	133953979	True	NM_001042383,NM_001005861	chr3,chr3	+,-	CEP63,RYK	250595,15657
chr14:45603526-45603839	chr14	+	45603537	45603888	True	NM_002013,NM_020937	chr14,chr14	-,+	FKBP3,FANCM	-58,1247
chrY:15016004-15017560	chrY	+	15016193	15017514	True	NM_004660,NM_001122665,NR_033667	chrY,chrY,chrY	+,+,-	DDX3Y,DDX3Y,GYG2P1	63,-225,-482804
chr5:139739681-139739918	chr5	+	139739683	139739887	True	NM_001945,NM_031467	chr5,chr5	-,+	HBEGF,SLC4A9	-13495,-37
chr15:40735986-40736646	chr15	+	40736130	40736694	True	NR_002208,NM_014952	chr15,chr15	-,+	MRPL42P5,BAHD1	88105,-2770
chr17:36956756-36957195	chr17	+	36956782	36956984	True	NM_003559,NM_002795	chr17,chr17	-,+	PIP4K2B,PSMB3	-624,-47837
chr15:90542582-90542988	chr15	+	90542597	90542869	True	NM_182616,NM_198526	chr15,chr15	-,+	C15orf38,ZNF710	-86375,1882
chr2:48811181-48812545	chr2	+	48811281	48812328	True	NM_001198594,NM_000233	chr2,chr2	+,-	STON1-GTF2A1L,LHCGR	-3606,170604
chr1:231157163-231158263	chr1	+	231157242	231157974	True	NM_022786,NR_031593	chr1,chr1	+,-	ARV1,MIR1182	-42470,-1572
chr19:19250099-19250549	chr19	+	19250113	19250191	True	NM_017814,NM_003721	chr19,chr19	-,+	TMEM161A,RFXANK	-846,52816
chr10:124913776-124914050	chr10	+	124913779	124914087	True	NM_001007793,NM_005519,NM_022466,NM_004725	chr10,chr10,chr10,chr10	+,+,-,+	BUB3,HMX2,IKZF5,BUB3	-70,-6192,-145468,-70
chr1:233750501-233750782	chr1	+	233750509	233750819	True	NM_002245,NM_014801	chr1,chr1	+,-	KCNK1,PCNXL2	-810,-319050
chr1:53387863-53388991	chr1	+	53388182	53389004	True	NM_001198962,NM_002979,NM_001198961,NM_001193617,NM_001193600,NM_018281,NM_001193599,NM_001007098	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,+,-,+,+,-,+,+	ECHDC2,SCP2,ECHDC2,SCP2,SCP2,ECHDC2,SCP2,SCP2	-736,3896,-736,3896,3896,-736,3896,3896
chr17:41985822-41986525	chr17	+	41986111	41986413	True	NR_026770,NM_005374	chr17,chr17	+,-	C17orf88,MPP2	8162,-998
chr14:51296121-51296766	chr14	+	51296199	51296684	True	NM_181533,NM_020921,NM_016350,NM_182946,NM_182944	chr14,chr14,chr14,chr14,chr14	+,-,-,-,-	ABHD12B,NIN,NIN,NIN,NIN	42193,1208,1208,1208,1208
chr19:33359829-33360339	chr19	+	33360208	33360284	True	NM_014270,NM_001126335,NM_152266	chr19,chr19,chr19	-,-,+	SLC7A9,SLC7A9,C19orf40	457,457,102863
chr2:120980752-120980954	chr2	+	120980827	120980987	True	NM_002881,NR_000034	chr2,chr2	+,-	RALB,TMEM185B	29426,47
chr13:78294525-78296039	chr13	+	78294573	78295821	True	NR_037438,NM_144595	chr13,chr13	-,+	MIR3665,SLAIN1	-22322,19473
chr14:55595225-55595727	chr14	+	55595284	55595697	True	NM_002306,NR_003225,NM_001146015,NM_001177388	chr14,chr14,chr14,chr14	+,+,-,+	LGALS3,LGALS3,DLGAP5,LGALS3	237,8003,62750,237
chr1:147142853-147143459	chr1	+	147142942	147143211	True	NM_004326,NM_016361	chr1,chr1	+,-	BCL9,ACP6	-129812,-308
chr4:4253427-4254198	chr4	+	4253427	4254036	True	NM_032927,NM_145291	chr4,chr4	-,+	TMEM128,ZBTB49	-3493,37887
chr3:49465507-49465874	chr3	+	49465728	49465814	True	NR_028435,NM_022171,NM_000481,NM_032316,NM_001164712,NM_001164710,NM_001164711	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-,-	AMT,TCTA,AMT,NICN1,AMT,AMT,AMT	-5617,-16141,-5617,993,-5617,-5617,-5617
chr11:281657-281886	chr11	+	281663	281925	True	NM_025092,NM_001025295,NM_138329	chr11,chr11,chr11	+,-,+	ATHL1,IFITM5,NLRP6	7212,17651,-3144
chr1:207519669-207520695	chr1	+	207519774	207520598	True	NM_001114752,NM_018566	chr1,chr1	+,-	CD55,YOD1	-25008,-295352
chr7:23629706-23630996	chr7	+	23629727	23630686	True	NM_138771,NR_002711	chr7,chr7	+,-	CCDC126,CLK2P	6311,-3581
chr6:26383774-26384415	chr6	+	26383826	26384346	True	NM_006995,NM_003543,NM_181531,NM_001197237,NM_001197239,NM_001197238,NM_001197240	chr6,chr6,chr6,chr6,chr6,chr6,chr6	+,-,+,+,+,+,+	BTN2A2,HIST1H4H,BTN2A2,BTN2A2,BTN2A2,BTN2A2,BTN2A2	-555,-98099,-555,-445,-555,-560,-555
chr19:49662668-49663467	chr19	+	49663156	49663416	True	NM_001195227,NM_017636,NM_002152	chr19,chr19,chr19	+,+,-	TRPM4,TRPM4,HRC	-2198,-2198,-4475
chr3:72893280-72895250	chr3	+	72893576	72895279	True	NM_001080393,NM_018130	chr3,chr3	+,-	GXYLT2,SHQ1	42105,2369
chr19:46273169-46273373	chr19	+	46273221	46273345	True	NM_175875,NM_017659	chr19,chr19	-,+	SIX5,QPCTL	-724,-77531
chr13:41832671-41833760	chr13	+	41832800	41833432	True	NM_001110798,NM_004294	chr13,chr13	+,-	NAA16,MTRF1	51908,4341
chr2:130988816-130989141	chr2	+	130988821	130989081	True	NM_025029,NM_207312	chr2,chr2	+,-	MZT2B,TUBA3E	-49371,-32787
chr2:130988816-130989141	chr2	-	132200402	132200456	False	NR_002826,NM_080386	chr2,chr2	-,+	LOC401010,TUBA3D	2061,33209
chr8:141521891-141522206	chr8	+	141522081	141522253	True	NR_023360,NM_031466,NM_017444	chr8,chr8,chr8	+,-,+	CHRAC1,TRAPPC9,CHRAC1	-717,-53403,-731
chr3:170746213-170746621	chr3	+	170746360	170746636	True	NM_000340,NM_001185056	chr3,chr3	-,+	SLC2A2,CLDN11	-1592,-607383
chr8:87077581-87078081	chr8	+	87077593	87077900	True	NM_152565,NM_033126	chr8,chr8	+,-	ATP6V0D2,PSKH2	33238,4012
chr13:29235696-29237538	chr13	+	29235752	29237034	True	NM_001135919,NM_015932	chr13,chr13	-,+	SLC46A3,POMP	56166,-2665
chr11:120002319-120003331	chr11	+	120002338	120003316	True	NM_012101,NM_178507	chr11,chr11	-,+	TRIM29,OAF	5597,78430
chr3:15562329-15562530	chr3	+	15562380	15562502	True	NM_005677,NM_000060,NM_080539	chr3,chr3,chr3	-,+,-	COLQ,BTD,COLQ	806,80752,806
chr5:154317220-154317563	chr5	+	154317252	154317534	True	NM_001014990,NM_015465,NM_014180	chr5,chr5,chr5	+,-,+	MRPL22,GEMIN5,MRPL22	3098,292,3098
chr16:67263522-67264050	chr16	+	67263573	67264047	True	NM_014187,NM_012163,NM_001004055	chr16,chr16,chr16	+,-,-	TMEM208,LRRC29,LRRC29	-2608,-2852,-2672
chr17:26571975-26572864	chr17	+	26572242	26572865	True	NR_002181,NR_028334	chr17,chr17	+,-	PPY2,FLJ40504	1604,61594
chr1:204381923-204382929	chr1	+	204382264	204382704	True	NM_001204171,NM_032833	chr1,chr1	+,-	MDM4,PPP1R15B	102802,-1320
chr18:31271754-31272853	chr18	+	31271760	31272855	True	NM_030632,NM_198995	chr18,chr18	+,-	ASXL3,C18orf34	-113277,-251075
chr14:29233559-29233830	chr14	+	29233564	29233878	True	NM_002742,NR_026731,NR_026732,NM_005249	chr14,chr14,chr14,chr14	-,+,+,+	PRKD1,C14orf23,C14orf23,FOXG1	1163071,8031,8031,2408
chr5:57900418-57901654	chr5	+	57900598	57901432	True	NM_006622,NM_138453	chr5,chr5	-,+	PLK2,RAB3C	-144685,-21710
chr10:5202061-5203862	chr10	+	5202200	5203713	True	NR_027916,NM_001818	chr10,chr10	-,+	AKR1CL1,AKR1C4	23490,35084
chr2:178969260-178969993	chr2	+	178969301	178969919	True	NM_001077197,NM_152945	chr2,chr2	-,+	PDE11A,RBM45	3198,7262
chr6:123317517-123317739	chr6	+	123317516	123317748	True	NM_001010852,NM_020755	chr6,chr6	+,-	CLVS2,SERINC1	1,-524564
chr17:3702578-3703138	chr17	+	3702626	3703122	True	NM_031965,NM_002208	chr17,chr17	+,-	GSG2,ITGAE	-75480,1471
chr6:166078199-166078958	chr6	+	166078242	166078992	True	NM_001130690,NM_006661,NR_027284	chr6,chr6,chr6	-,-,+	PDE10A,PDE10A,LOC441177	-2658,-2658,322046
chr1:21043216-21043460	chr1	+	21043248	21043496	True	NM_020816,NM_001122819,NM_032409	chr1,chr1,chr1	-,-,+	KIF17,KIF17,PINK1	871,871,-83354
chr1:223852248-223853645	chr1	+	223852307	223853633	True	NM_001146068,NM_001143962	chr1,chr1	+,-	CAPN2,CAPN8	35661,15
chr12:62996278-62996525	chr12	+	62996283	62996507	True	NM_175895,NR_029661	chr12,chr12	-,+	C12orf61,MIRLET7I	757,958
chr11:3013879-3015095	chr11	+	3013887	3014720	True	NM_005969,NM_002555	chr11,chr11	-,+	NAP1L4,SLC22A18	-280,-90426
chr3:43360238-43360624	chr3	+	43360546	43360664	True	NM_017719,NM_032806	chr3,chr3	+,-	SNRK,C3orf39	-32594,-212981
chr12:8759592-8760303	chr12	+	8759687	8760319	True	NM_020661,NM_020734	chr12,chr12	-,+	AICDA,RIMKLB	5173,90198
chr19:56353085-56354216	chr19	+	56353381	56354008	True	NM_145007,NM_134444	chr19,chr19	-,+	NLRP11,NLRP4	-5253,-5495
chr10:121303115-121303511	chr10	+	121303133	121303473	True	NM_001005339,NM_004281,NM_002925	chr10,chr10,chr10	-,+,-	RGS10,BAG3,RGS10	-911,107408,-7088
chr11:63537261-63537928	chr11	+	63537290	63537946	True	NM_138471,NM_001144936	chr11,chr11	+,-	C11orf84,C11orf95	42976,-1177
chr21:17668675-17668971	chr21	+	17668719	17668867	True	NM_003489,NR_027791	chr21,chr21	-,+	NRIP1,C21orf34	-1231593,-102077
chr15:70994670-70995484	chr15	+	70994672	70995500	True	NM_001199017,NM_001008224	chr15,chr15	+,-	LRRC49,UACA	189427,-52
chr11:70115923-70116185	chr11	+	70116027	70116137	True	NM_133266,NM_003626,NM_177423	chr11,chr11,chr11	-,+,+	SHANK2,PPFIA1,PPFIA1	391836,685,685
chr14:24039376-24039671	chr14	+	24039377	24039580	True	NM_001146028,NR_023314,NM_032452,NM_003917	chr14,chr14,chr14,chr14	-,+,-,-	JPH4,THTPA,JPH4,AP1G2	8481,-14230,8481,-2098
chr1:161037845-161039225	chr1	+	161038000	161039190	True	NR_033385,NM_001025598,NM_181720	chr1,chr1,chr1	+,-,-	KLHDC9,ARHGAP30,ARHGAP30	28960,620,620
chr11:61687701-61688249	chr11	+	61687836	61688094	True	NM_013401,NM_001139443	chr11,chr11	-,+	RAB3IL1,BEST1	-2839,29261
chr20:526789-527089	chr20	+	526792	527043	True	NM_031229,NM_177560,NM_001895,NM_177559	chr20,chr20,chr20,chr20	+,-,-,-	RBCK1,CSNK2A1,CSNK2A1,CSNK2A1	-138134,-2310,-2310,-2310
chr3:16556790-16557907	chr3	+	16557195	16557947	True	NM_138381,NM_015150	chr3,chr3	+,-	OXNAD1,RFTN1	-250581,-1973
chrY:14107912-14108205	chrY	+	14107994	14108255	True	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	666042,425185
chr5:178369329-178369895	chr5	+	178369421	178369909	True	NM_182594,NM_000843,NM_001178090,NM_001178089	chr5,chr5,chr5,chr5	+,-,+,+	ZNF454,GRM6,ZNF454,ZNF454	-1278,52265,-1278,-1278
chr7:100486872-100487210	chr7	+	100486880	100487240	True	NM_000665,NM_015908,NM_015831,NM_001015072	chr7,chr7,chr7,chr7	-,+,-,-	ACHE,SRRT,ACHE,UFSP1	6351,-14230,6351,149
chr17:36885941-36886185	chr17	+	36885941	36886012	True	NM_007144,NM_001136498	chr17,chr17	-,+	PCGF2,CISD3	18601,497
chr21:45430134-45430469	chr21	+	45430167	45430437	True	NR_026961,NM_003274	chr21,chr21	-,+	LOC284837,TRAPPC10	-197719,1768
chr11:9112238-9112529	chr11	+	9112285	9112497	True	NM_020974,NR_027713,NM_001170690	chr11,chr11,chr11	-,+,-	SCUBE2,KRT8P41,SCUBE2	703,3412,703
chr19:35169260-35169535	chr19	+	35169357	35169569	True	NM_018443,NM_001012320,NM_001025591	chr19,chr19,chr19	+,+,-	ZNF302,ZNF302,SCGBL	-854,-854,-83867
chr1:167486479-167486898	chr1	+	167486563	167486877	True	NM_052862,NM_000734,NM_198053	chr1,chr1,chr1	+,-,-	RCSD1,CD247,CD247	112596,1020,1020
chr13:65884479-65884878	chr13	+	65884530	65884926	True	NR_002171,NM_020403	chr13,chr13	+,-	OR7E156P,PCDH9	-1573013,1919592
chr22:24115683-24116613	chr22	+	24115692	24116508	True	NM_213720,NM_005940	chr22,chr22	-,+	CHCHD10,MMP11	-5551,-707
chr17:48637671-48637992	chr17	+	48637741	48637960	True	NM_198377,NM_198376,NM_001267,NM_198396,NM_198384,NM_198379,NM_198378,NM_198386,NM_198387,NM_198397,NM_198385,NM_198382,NM_198383,NM_198380,NM_018896,NM_198388	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,-,+,+,+,+,+,+,+,+,+,+,+,+,+	CACNA1G,CACNA1G,CHAD,CACNA1G,CACNA1G,CACNA1G,CACNA1G,CACNA1G,CACNA1G,CACNA1G,CACNA1G,CACNA1G,CACNA1G,CACNA1G,CACNA1G,CACNA1G	488,488,-91514,488,488,488,488,488,488,488,488,488,488,488,488,488
chr18:32821348-32822482	chr18	+	32821441	32822509	True	NM_001135178,NM_001112734,NM_032347	chr18,chr18,chr18	+,-,+	ZNF397,ZSCAN30,ZNF397	-499,47737,-499
chr5:112824007-112824226	chr5	+	112824127	112824187	True	NM_001085377,NM_022828	chr5,chr5	-,+	MCC,YTHDC2	390,25203
chr3:100120033-100120771	chr3	+	100120038	100120790	True	NM_014820,NM_001085451	chr3,chr3	-,+	TOMM70A,LNP1	13,-52
chr6:53516431-53516672	chr6	+	53516432	53516640	True	NM_018214,NM_001003760	chr6,chr6	+,-	LRRC1,KLHL31	143137,13916
chr11:8059738-8060854	chr11	+	8059795	8060619	True	NM_003320,NM_176821	chr11,chr11	+,-	TUB,NLRP10	-118,-74736
chr2:234615780-234616804	chr2	+	234615827	234616796	True	NM_001001394,NM_019078	chr2,chr2	-,+	DNAJB3,UGT1A5	35916,4841
chr2:202899499-202899823	chr2	+	202899625	202899861	True	NM_001005781,NM_003507	chr2,chr2	-,+	SUMO1,FZD7	203511,-366
chr5:178288144-178289526	chr5	+	178288280	178289366	True	NR_024035,NM_058230	chr5,chr5	-,+	AACSP1,ZNF354B	-85003,-1389
chr21:43529200-43529559	chr21	+	43529285	43529601	True	NM_173568,NR_027243	chr21,chr21	+,-	UMODL1,C21orf128	-37917,-641
chr18:43550176-43550955	chr18	+	43550296	43550803	True	NM_020964,NM_138443	chr18,chr18	-,+	EPG5,HAUS1	-2991,133494
chr3:142289523-142290029	chr3	+	142289661	142289993	True	NM_001184,NM_001145319	chr3,chr3	-,+	ATR,PLS1	7727,25235
chr17:36883902-36885064	chr17	+	36884065	36884723	True	NM_007144,NM_001136498	chr17,chr17	-,+	PCGF2,CISD3	19885,1786
chr7:996687-996911	chr7	+	996753	996959	True	NM_006869,NM_017781	chr7,chr7	-,+	ADAP1,CYP2W1	-2464,25875
chr22:25030335-25031205	chr22	+	25030943	25031101	True	NR_024593,NR_024494	chr22,chr22	-,+	POM121L10P,BCRP3	24063,-2112
chr20:3185314-3185655	chr20	+	3185374	3185510	True	NM_033453,NM_181493,NM_023935	chr20,chr20,chr20	+,+,-	ITPA,ITPA,DDRGK1	4545,4545,-79
chr17:74722060-74722267	chr17	+	74722157	74722233	True	NM_001080510,NM_015167,NM_001081461	chr17,chr17,chr17	+,-,-	METTL23,JMJD6,JMJD6	716,698,698
chr5:179334062-179334373	chr5	+	179334072	179334382	True	NM_015043,NM_003900,NM_198868	chr5,chr5,chr5	-,+,-	TBC1D9B,SQSTM1,TBC1D9B	524,-86281,524
chr2:102314801-102315315	chr2	+	102314832	102315257	True	NM_145687,NM_145686,NM_004834,NM_001145664	chr2,chr2,chr2,chr2	+,+,+,-	MAP4K4,MAP4K4,MAP4K4,RFX8	-395,-395,-395,-223667
chr10:27443657-27444480	chr10	+	27443686	27444460	True	NM_032844,NM_014263,NM_001172304,NM_001172303,NM_139312	chr10,chr10,chr10,chr10,chr10	+,-,+,+,-	MASTL,YME1L1,MASTL,MASTL,YME1L1	8,-365,8,8,-365
chr4:44727381-44728111	chr4	+	44727548	44727944	True	NM_138335,NM_021927	chr4,chr4	-,+	GNPDA2,GUF1	718,-47172
chr5:43620615-43621838	chr5	+	43620759	43621880	True	NM_182977,NM_183323	chr5,chr5	+,-	NNT,PAIP1	-17582,-63238
chr16:15983775-15984163	chr16	+	15983937	15984010	True	NM_144600,NM_004996	chr16,chr16	-,+	FOPNL,ABCC1	-1490,59423
chr17:53341856-53342350	chr17	+	53341868	53342036	True	NM_002126,NM_012329	chr17,chr17	+,-	HLF,MMD	284,157355
chr14:75895571-75897007	chr14	+	75895594	75896862	True	NM_130469,NM_001135048,NM_001135049,NM_007176,NM_001135047	chr14,chr14,chr14,chr14,chr14	+,+,+,-,+	JDP2,JDP2,JDP2,C14orf1,JDP2	-585,-725,1974,230726,-1136
chr5:141303631-141305535	chr5	+	141303869	141305374	True	NM_014773,NR_033244,NM_001142603	chr5,chr5,chr5	+,-,+	KIAA0141,LOC729080,KIAA0141	-543,-27609,-543
chr22:32550434-32550872	chr22	+	32550477	32550881	True	NM_001010859,NR_033411	chr22,chr22	-,+	C22orf42,SLC5A1	4412,-95378
chr22:32550434-32550872	chr22	-	29802359	29802419	False	NM_145730,NM_021026	chr22,chr22	-,+	AP1B1,RFPL1	-17787,32152
chr16:10972295-10972585	chr16	+	10972328	10972576	True	NM_000246,NM_001079512	chr16,chr16	+,-	CIITA,FAM18A	-1324,-59707
chr22:16989165-16990345	chr22	+	16989777	16989837	True	NM_014406,NR_001591	chr22,chr22	-,+	CCT8L2,psiTPTE22	83913,92963
chr2:65583845-65584992	chr2	+	65584261	65584959	True	NM_005722,NM_001128210	chr2,chr2	+,-	ACTR2,SPRED2	-129483,9022
chr6:112572850-112573702	chr6	+	112572855	112573711	True	NM_001013734,NM_001105209,NM_001105208,NM_002290,NM_001105207,NM_001105206	chr6,chr6,chr6,chr6,chr6,chr6	+,-,-,-,-,-	RFPL4B,LAMA4,LAMA4,LAMA4,LAMA4,LAMA4	94820,2176,2176,2176,2176,2176
chr3:149757022-149758367	chr3	+	149757109	149758385	True	NM_053024,NR_036538	chr3,chr3	-,+	PFN2,LOC646903	-68368,-68105
chr4:49317098-49317553	chr4	+	49317391	49317451	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-329177,-408576
chr11:55586980-55588362	chr11	+	55587068	55588043	True	NM_001001952,NM_001004739,NM_001001960,NM_001004738	chr11,chr11,chr11,chr11	+,+,-,+	OR5D18,OR5L2,OR5W2,OR5L1	-26,6651,94066,-8189
chr11:47506966-47507340	chr11	+	47507014	47507138	True	NM_001025596,NM_152264,NM_198700,NM_001172640	chr11,chr11,chr11,chr11	-,+,-,-	CELF1,SLC39A13,CELF1,CELF1	3498,-77020,8995,3498
chr7:101007433-101008418	chr7	+	101007471	101008361	True	NM_022777,NM_133457	chr7,chr7	-,+	RABL5,EMID2	-42378,-1407
chr1:226072650-226073347	chr1	+	226072812	226073306	True	NM_020997,NM_000120,NM_014698	chr1,chr1,chr1	-,+,-	LEFTY1,EPHX1,TMEM63A	3596,-59872,-2392
chr19:1040620-1041413	chr19	+	1040691	1041229	True	NM_033420,NM_019112	chr19,chr19	-,+	C19orf6,ABCA7	-19550,-640
chr9:130689740-130690105	chr9	+	130689913	130689981	True	NM_001135219,NM_001018078,NM_173492	chr9,chr9,chr9	-,+,-	PIP5KL1,FPGS,PIP5KL1	3145,-124456,-143
chr17:16873992-16874285	chr17	+	16874091	16874253	True	NM_015134,NM_012452	chr17,chr17	+,-	MPRIP,TNFRSF13B	71853,1199
chr22:25204235-25205803	chr22	+	25204374	25205758	True	NM_001098498,NM_001008496,NM_001098497,NM_001039948,NM_133454	chr22,chr22,chr22,chr22,chr22	+,-,+,+,+	SGSM1,PIWIL3,SGSM1,SGSM1,SGSM1	-2290,-33691,-2290,-2290,-2290
chr1:238026895-238027781	chr1	+	238026930	238027551	True	NR_027247,NM_021186	chr1,chr1	+,-	LOC100130331,ZP4	-1506,26726
chr20:4801752-4802825	chr20	+	4801837	4802809	True	NM_012409,NM_170774,NM_014737	chr20,chr20,chr20	+,-,-	PRND,RASSF2,RASSF2	-99332,-6068,1532
chr9:4692360-4692675	chr9	+	4692591	4692692	True	NM_017913,NM_001039395	chr9,chr9	+,-	CDC37L1,C9orf68	-13085,-25917
chr16:4399459-4399739	chr16	+	4399627	4399771	True	NM_032575,NM_016069	chr16,chr16	+,-	GLIS2,PAM16	-17453,1652
chr16:89223712-89225268	chr16	+	89223850	89225070	True	NR_024347,NM_005187	chr16,chr16	+,-	C16orf81,CBFA2T3	557,-180346
chr13:49796151-49798097	chr13	+	49796234	49797985	True	NM_030925,NM_001507	chr13,chr13	-,+	CAB39L,MLNR	177806,-1818
chr19:54039216-54040011	chr19	+	54039514	54039822	True	NM_001079906,NR_002938	chr19,chr19	+,-	ZNF331,LOC284379	1510,66991
chr17:26681539-26682824	chr17	+	26681728	26682839	True	NM_001080837,NM_015584,NM_152464	chr17,chr17,chr17	-,-,+	SEBOX,POLDIP2,TMEM199	9476,1814,1847
chr17:79981617-79981960	chr17	+	79981671	79981859	True	NM_005052,NM_144998,NM_144999	chr17,chr17,chr17	+,-,+	RAC3,STRA13,LRRC45	7672,-898,-442
chr6:21666028-21666389	chr6	+	21666292	21666415	True	NR_034143,NR_015410	chr6,chr6	-,+	LOC729177,FLJ22536	481058,259
chr7:153755844-153756591	chr7	+	153756454	153756540	True	NM_130797,NM_007349	chr7,chr7	+,-	DPP6,PAXIP1	-6728,1038192
chr2:54081085-54081458	chr2	+	54081181	54081393	True	NM_001164165,NM_006794,NM_015701,NR_037453	chr2,chr2,chr2,chr2	-,-,+,-	GPR75-ASB3,GPR75,ERLEC1,MIR3682	5827,5827,-67164,-4839
chr17:30811823-30813045	chr17	+	30811987	30813052	True	NM_003885,NM_022344	chr17,chr17	+,-	CDK5R1,C17orf75	1052,-142798
chr11:10563009-10564027	chr11	+	10563146	10564052	True	NM_016422,NR_034093,NR_034094	chr11,chr11,chr11	-,+,+	RNF141,LOC100129827,LOC100129827	-372,-378,-421
chr7:56132808-56133628	chr7	+	56132943	56133507	True	NM_001130069,NM_004577,NM_001042469,NM_001146333,NM_015411,NR_002957,NM_001042470	chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,-,+,+,+,+,+	SUMF2,PSPH,SUMF2,SUMF2,SUMF2,SNORA15,SUMF2	-1077,-13675,-1077,-1077,-1077,-4831,-1077
chr16:3509842-3510974	chr16	+	3509842	3510900	True	NM_001083600,NM_024845,NM_152457	chr16,chr16,chr16	+,+,-	NAT15,NAT15,ZNF597	-1901,-1901,-16352
chrX:101186796-101187141	chrX	+	101186978	101187136	True	NM_001011657,NM_080390	chrX,chrX	-,+	ZMAT1,TCEAL2	-29,193523
chr17:45438950-45439753	chr17	+	45439001	45439402	True	NR_033934,NM_152347	chr17,chr17	-,+	MRPL45P2,C17orf57	130644,-37733
chr18:44131359-44131766	chr18	+	44131364	44131731	True	NM_152470,NM_001145472	chr18,chr18	+,-	RNF165,LOXHD1	-217233,7596
chr5:36151134-36151466	chr5	+	36151148	36151430	True	NR_030306,NM_001007527,NM_005983,NM_032637	chr5,chr5,chr5,chr5	-,-,+,+	MIR580,LMBRD2,SKP2,SKP2	-3058,635,758,758
chr17:26896213-26898024	chr17	+	26896601	26897908	True	NM_003593,NM_005165,NM_033198	chr17,chr17,chr17	+,-,-	FOXN1,ALDOC,PIGS	-45694,6093,1029
chr17:74462143-74462711	chr17	+	74462188	74462702	True	NM_022066,NM_001088	chr17,chr17	-,+	UBE2O,AANAT	-12900,927
chr2:39006665-39007180	chr2	+	39006667	39006768	True	NM_001195446,NM_024775	chr2,chr2	-,+	SRSF7,GEMIN6	-28031,-1402
chr16:20418134-20419308	chr16	+	20418415	20418907	True	NM_174924,NM_017888	chr16,chr16	-,+	PDILT,ACSM5	-2382,1948
chr16:89280401-89281757	chr16	+	89280533	89281481	True	NR_037705,NM_001201407,NM_005187,NM_182531	chr16,chr16,chr16,chr16	+,+,-,+	ZNF778,ZNF778,CBFA2T3,ZNF778	2629,2629,-237029,2629
chr8:93978222-93978448	chr8	+	93978237	93978481	True	NM_001191035,NM_001171795,NM_001171796,NM_001171797,NM_001171798,NM_001171799,NM_145269,NM_001191036	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,-,-,+,-	C8orf83,C8orf83,C8orf83,C8orf83,C8orf83,C8orf83,FAM92A1,C8orf83	6,-33,-33,-33,-33,-33,734291,-420
chr17:78964689-78964944	chr17	+	78964819	78964951	True	NR_026857,NM_024591	chr17,chr17	-,+	FLJ90757,CHMP6	43618,689
chr11:82997029-82997307	chr11	+	82997056	82997326	True	NM_182603,NM_021825	chr11,chr11	+,-	ANKRD42,CCDC90B	-91816,101
chr19:6770022-6771182	chr19	+	6770360	6770625	True	NM_005490,NM_005428	chr19,chr19	-,+	SH2D3A,VAV1	-2837,2096
chr16:57661204-57661979	chr16	+	57661363	57661959	True	NM_001145771,NM_001145770,NM_001145773,NM_001145772,NM_033212,NM_201525,NM_201524,NM_005682	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,-,+,+,+	GPR56,GPR56,GPR56,GPR56,CCDC102A,GPR56,GPR56,GPR56	459,-7504,459,459,-90886,459,459,-7504
chr4:8874864-8875096	chr4	+	8874931	8875095	True	NM_018942,NM_001040071	chr4,chr4	-,+	HMX1,LOC650293	-1388,76381
chr1:203762968-203763496	chr1	+	203763079	203763533	True	NM_001174108,NM_014827,NR_027902	chr1,chr1,chr1	+,+,-	ZBED6,ZC3H11A,C1orf157	3117,1217,246909
chr7:74268403-74268717	chr7	+	74268403	74268753	True	NM_173537,NR_027775	chr7,chr7	-,+	GTF2IRD2,PMS2P5	-562,38140
chr7:74268403-74268717	chr7	-	74507465	74507815	False	NM_030798,NM_001003795	chr7,chr7	-,+	WBSCR16,GTF2IRD2B	-17766,531
chr9:141108746-141108995	chr7	-	33871	34091	False	NM_002607,NM_020223	chr7,chr7	-,+	PDGFA,FAM20C	525440,158877
chr9:141108746-141108995	chr3	+	197881508	197881728	False	NR_003291	chr3	-	LOC348840	-73966
chr9:141108746-141108995	chr16	+	90170228	90170298	False	NM_001098173,NR_023348	chr16,chr16	-,+	PRDM7,GAS8	-27890,-81271
chr9:141108746-141108995	chr9	+	141108749	141108969	True	NM_032937	chr9	-	C9orf37	-595441
chr5:121674962-121675313	chr5	+	121674966	121675343	True	NM_005460,NM_002317	chr5,chr5	+,-	SNCAIP,LOX	-27198,-260911
chrX:45492277-45492837	chrX	+	45492303	45492681	True	NR_029635,NM_021140	chrX,chrX	-,+	MIR221,KDM6A	113063,-759931
chr16:47495251-47495596	chr16	+	47495300	47495630	True	NM_030790,NM_000293,NM_001031835	chr16,chr16,chr16	-,+,+	ITFG1,PHKB,PHKB	-285,-141,-141
chr16:8625903-8627874	chr16	+	8625908	8627180	True	NM_001146336,NM_024109	chr16,chr16	-,+	TMEM114,METTL22	-3682,88346
chr6:89789648-89790139	chr6	+	89789661	89790175	True	NM_006813,NM_080743	chr6,chr6	+,-	PNRC1,SRSF12	253,37675
chr5:179331941-179332281	chr5	+	179331951	179332319	True	NM_015043,NM_003900,NM_198868	chr5,chr5,chr5	-,+,-	TBC1D9B,SQSTM1,TBC1D9B	2587,-84160,2587
chr16:12146164-12147299	chr16	+	12146420	12147246	True	NM_001080530,NM_001130007	chr16,chr16	+,-	SNX29,GSPT1	-424,-135901
chr16:12146164-12147299	chr16	+	21397965	21398015	False	NR_026675,NM_130464	chr16,chr16	+,-	NCRNA00169,NPIPL3	-85846,38693
chr16:12146164-12147299	chr16	+	29377100	29377150	False	NR_002939,NM_001031827	chr16,chr16	+,-	RUNDC2C,BOLA2	-74610,89185
chr1:146671641-146671934	chr1	+	146671695	146671965	True	NR_002305,NM_001144829	chr1,chr1	+,-	PDIA3P,FMO5	-22316,25315
chr3:169938075-169938506	chr3	+	169938215	169938285	True	NM_002740,NM_024947	chr3,chr3	+,-	PRKCI,PHC3	1934,-38678
chr2:224806014-224806247	chr2	+	224806046	224806238	True	NM_020830,NM_022915	chr2,chr2	-,+	WDFY1,MRPL44	3864,15882
chr12:3185297-3185537	chr12	+	3185463	3185552	True	NM_202003,NM_006675,NM_001168320	chr12,chr12,chr12	-,+,+	FOXM1,TSPAN9,TSPAN9	-199160,968,968
chr6:161693518-161693948	chr6	+	161693664	161693968	True	NM_006724,NM_020133	chr6,chr6	+,-	MAP3K4,AGPAT4	-280893,1189
chr3:126233705-126233984	chr3	+	126233794	126233932	True	NM_152889,NM_001165974,NM_144639	chr3,chr3,chr3	+,-,-	CHST13,UROC1,UROC1	9243,2734,2734
chr19:9473313-9473666	chr19	+	9473442	9473576	True	NM_198535,NM_003451	chr19,chr19	-,+	ZNF699,ZNF177	-57647,119
chr5:151304855-151305134	chr5	+	151304889	151305183	True	NM_198395,NM_000171,NM_001146040	chr5,chr5,chr5	+,-,-	G3BP1,GLRA1,GLRA1	-153464,-492,-492
chr7:100451137-100451851	chr7	+	100451139	100451808	True	NM_020246,NM_004444	chr7,chr7	+,-	SLC12A9,EPHB4	-832,-25996
chr18:31803383-31803624	chr18	+	31803413	31803497	True	NM_001198548,NM_001392,NM_001198546,NM_001198547,NM_003787,NR_036752	chr18,chr18,chr18,chr18,chr18,chr18	-,+,-,-,-,-	NOL4,DTNA,NOL4,NOL4,NOL4,NOL4	68,269756,68,-979,68,-979
chr1:115881542-115883082	chr1	+	115881557	115882999	True	NM_002506,NM_001172411	chr1,chr1	-,+	NGF,VANGL1	-700,301574
chr8:22015151-22016831	chr8	+	22015649	22016869	True	NM_139278,NM_001199,NM_001172357,NR_033403,NR_033404,NM_001172410,NM_006129,NM_003018	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,+,+,+,+,+,+,+	LGI3,BMP1,SFTPC,BMP1,BMP1,SFTPC,BMP1,SFTPC	-1305,5783,2314,5783,5783,2314,5783,2314
chr12:15320382-15322336	chr12	+	15320456	15322322	True	NM_002848,NM_001190726	chr12,chr12	+,-	PTPRO,RERG	153164,52139
chr18:6370218-6370705	chr18	+	6370267	6370693	True	NR_036205,NM_001010000	chr18,chr18	-,+	MIR4317,ARHGAP28	3781,463738
chr17:29157713-29157961	chr17	+	29157816	29157995	True	NM_015986,NM_024857	chr17,chr17	-,+	CRLF3,ATAD5	-6038,1027
chr22:35866084-35867447	chr22	+	35866474	35867494	True	NM_005368,NM_006739,NM_014310	chr22,chr22,chr22	-,+,+	MB,MCM5,RASD2	145940,-70416,69857
chr1:31888819-31889086	chr1	+	31888823	31889079	True	NM_001199039,NM_001199038,NM_018565,NM_001199037,NM_178865,NM_004102	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-	SERINC2,SERINC2,SERINC2,SERINC2,SERINC2,FABP3	-2214,-6462,-2214,-5853,-2911,-42900
chr1:167879381-167880830	chr1	+	167879730	167880868	True	NM_018417,NM_001017977,NM_001167749	chr1,chr1,chr1	-,+,-	ADCY10,DCAF6,ADCY10	2635,24928,2635
chr10:135206210-135206600	chr10	+	135206315	135206400	True	NM_138384,NM_004092	chr10,chr10	+,-	MTG1,ECHS1	1220,-19407
chrX:17395252-17395459	chrX	+	17395257	17395503	True	NR_033348,NM_198270	chrX,chrX	-,+	RAI2,NHS	483494,-1765
chr5:43129126-43129915	chr5	+	43129466	43129704	True	NM_003432,NR_034127	chr5,chr5	+,-	ZNF131,LOC100132356	-7877,-62393
chr17:59923906-59925729	chr17	+	59924119	59925713	True	NM_032043,NM_018488	chr17,chr17	-,+	BRIP1,TBX4	15257,-390363
chr3:36922662-36923307	chr3	+	36923280	36923349	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	63256,111491
chr10:121412650-121414101	chr10	+	121412657	121414015	True	NM_004281,NM_003252	chr10,chr10	+,-	BAG3,TIAL1	-1826,-56116
chr3:129827961-129828314	chr3	+	129828042	129828108	True	NM_001136152,NR_024252	chr3,chr3	+,-	ALG1L2,LOC729375	-27419,2218
chr22:44319702-44319933	chr22	+	44319709	44319841	True	NM_025225,NM_138814	chr22,chr22	+,-	PNPLA3,PNPLA5	-141,-31816
chr11:30253658-30255201	chr11	+	30253698	30255202	True	NM_002233,NM_001018080,NM_000510	chr11,chr11,chr11	-,+,+	KCNA4,FSHB,FSHB	-215121,-1187,-1187
chr17:21193722-21194410	chr17	+	21193742	21194016	True	NM_152914,NM_145109,NM_002756	chr17,chr17,chr17	-,+,+	C17orf103,MAP2K3,MAP2K3	-37164,-5825,-2445
chr2:27302082-27302515	chr2	+	27302095	27302497	True	NM_007046,NM_006488,NM_000221,NM_001134693	chr2,chr2,chr2,chr2	+,+,+,-	EMILIN1,KHK,KHK,OST4	-711,7113,7113,-7528
chr1:235291343-235291756	chr1	+	235291495	235291694	True	NM_001037277,NR_002956,NM_014765	chr1,chr1,chr1	+,-,-	GGPS1,SNORA14B,TOMM20	200058,-243,612
chr15:77236150-77236615	chr15	+	77236150	77236228	True	NM_020843,NM_002902	chr15,chr15	-,+	SCAPER,RCN2	-59933,-12249
chr11:64797749-64799101	chr11	+	64798312	64799094	True	NM_013306,NM_147777,NM_005468,NM_013299	chr11,chr11,chr11,chr11	+,+,-,+	SNX15,SNX15,NAALADL1,SAC3D1	-3483,-3483,26965,9281
chr4:36293372-36294212	chr4	+	36293762	36294249	True	NM_001170700,NM_015230	chr4,chr4	+,-	DTHD1,ARAP2	-8172,-47783
chr16:90082477-90083062	chr16	+	90082560	90082712	True	NM_001042610,NM_024043,NR_023348	chr16,chr16,chr16	-,-,+	DBNDD1,DBNDD1,GAS8	3275,-6031,6295
chr1:95306403-95307416	chr1	+	95306690	95307376	True	NM_152369,NM_001839	chr1,chr1	+,-	SLC44A3,CNN3	-20642,85409
chr1:99121938-99122578	chr1	+	99122285	99122474	True	NM_001010861,NR_033716,NM_152238,NM_015976	chr1,chr1,chr1,chr1	-,+,+,+	LPPR5,SNX7,SNX7,SNX7	348034,4761,4761,4761
chr17:7208109-7209572	chr17	+	7208200	7209385	True	NM_001970,NM_015982,NM_004489,NM_001143760,NM_001143761,NM_001143762	chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,+,+,+	EIF5A,YBX2,GPS2,EIF5A,EIF5A,EIF5A	1470,-10324,9324,932,1902,2308
chrX:153238574-153238966	chrX	+	153238596	153238788	True	NR_036174,NM_005334,NM_003492,NR_036175	chrX,chrX,chrX,chrX	+,-,+,-	MIR3202-1,HCFC1,TMEM187,MIR3202-2	7759,-1777,-664,7899
chr6:1307434-1308279	chr6	+	1307640	1308278	True	NM_033260,NR_027116	chr6,chr6	+,-	FOXQ1,LOC285768	4396,-206073
chr3:121304882-121306328	chr3	+	121304907	121306359	True	NM_199420,NM_016298	chr3,chr3	-,+	POLQ,FBXO40	-40054,5810
chr10:5531586-5531853	chr10	+	5531633	5531819	True	NM_017422,NM_005185	chr10,chr10	-,+	CALML5,CALML3	9764,35104
chr9:136325614-136325912	chr9	+	136325699	136325829	True	NM_017586,NM_001145099,NM_001135775	chr9,chr9,chr9	+,-,+	C9orf7,SLC2A6,C9orf7	-663,18497,-663
chr6:41098807-41099975	chr6	+	41099172	41099583	True	NR_026938,NM_178174	chr6,chr6	+,-	LOC221442,TREML1	-30450,22546
chr3:57583917-57584228	chr3	+	57583996	57584182	True	NM_001660,NM_177966	chr3,chr3	-,+	ARF4,PDE12	-781,-42074
chr1:38059406-38060234	chr1	+	38059454	38060111	True	NM_013285,NM_003462	chr1,chr1	-,+	GNL2,DNALI1	1526,-36995
chr14:98443972-98444282	chr14	+	98443997	98444329	True	NR_015430,NM_182560	chr14,chr14	-,+	C14orf64,C14orf177	182,733620
chr2:113991109-113992388	chr2	+	113991291	113992081	True	NR_015377,NM_003466	chr2,chr2	+,-	LOC654433,PAX8	1764,44467
chr14:21062610-21063689	chr14	+	21062762	21063045	True	NM_001024822,NM_145250,NM_001012975	chr14,chr14,chr14	-,-,+	RNASE12,RNASE11,RNASE10	-3780,-4345,-84182
chr22:22599062-22599371	chr22	+	22599061	22599417	True	NM_007128,NM_003935	chr22,chr22	+,-	VPREB1,TOP3B	-76,-261914
chr9:112079239-112079606	chr9	+	112079296	112079654	True	NM_018424,NM_019114,NM_001037293	chr9,chr9,chr9	-,-,+	EPB41L4B,EPB41L4B,PALM2	3417,3417,323413
chr3:9975380-9975621	chr3	+	9975423	9975651	True	NM_001031717,NM_207351,NM_015513,NM_001077415	chr3,chr3,chr3,chr3	+,-,+,+	CRELD1,PRRT3,CRELD1,CRELD1	-25,18477,-26,-25
chr11:117016928-117017432	chr11	+	117017100	117017218	True	NM_001184747,NM_001184746,NM_001184748,NM_025164,NM_002572	chr11,chr11,chr11,chr11,chr11	+,+,+,-,+	PAFAH1B2,PAFAH1B2,PAFAH1B2,SIK3,PAFAH1B2	-2156,-2156,-2156,-48107,-2156
chr14:35447860-35449265	chr14	+	35447930	35449031	True	NM_182648,NM_003136,NM_001146282	chr14,chr14,chr14	-,+,+	BAZ1A,SRP54,SRP54	-103077,3072,3072
chr11:101001709-101002819	chr11	+	101001749	101002867	True	NM_032021,NM_001202474,NM_000926	chr11,chr11,chr11	+,-,-	TMEM133,PGR,PGR	-138989,-1955,-1205
chr9:111696197-111696441	chr9	+	111696219	111696485	True	NM_017832,NM_003640	chr9,chr9	+,-	C9orf6,IKBKAP	187,173
chr1:16680425-16682010	chr1	+	16681335	16681792	True	NM_018994,NM_001114600	chr1,chr1	-,+	FBXO42,C1orf144	-2387,11790
chr3:99589815-99590671	chr3	+	99589815	99590691	True	NM_014890,NM_032359	chr3,chr3	-,+	FILIP1L,C3orf26	4405,-53188
chr19:12251298-12251599	chr19	+	12251301	12251645	True	NM_003437,NM_001203250,NM_021143	chr19,chr19,chr19	+,-,-	ZNF136,ZNF20,ZNF20	22226,-79,-79
chr1:17699537-17699761	chr1	+	17699572	17699740	True	NM_001136204,NM_207421	chr1,chr1	-,+	RCC2,PADI6	65367,-882
chr17:39551660-39552451	chr17	+	39551843	39552484	True	NM_002277,NM_030975	chr17,chr17	-,+	KRT31,KRTAP9-9	1410,-140258
chr6:119670575-119670832	chr6	+	119670760	119670832	True	NM_005907,NM_014034	chr6,chr6	-,+	MAN1A1,ASF1A	144,-455570
chr17:38907274-38907513	chr17	+	38907318	38907506	True	NM_001195387,NM_181534	chr17,chr17	+,-	TMEM99,KRT25	67837,4128
chr17:45973090-45973569	chr17	+	45973202	45973502	True	NM_003110,NM_199262	chr17,chr17	+,-	SP2,SP6	13,-39962
chr12:120687932-120689041	chr12	+	120687963	120688727	True	NM_025157,NM_012240	chr12,chr12	-,+	PXN,SIRT4	-6,51396
chr14:51562419-51563129	chr14	+	51562466	51562848	True	NM_052978,NM_015163,NM_030755	chr14,chr14,chr14	-,-,+	TRIM9,TRIM9,TMX1	-44,-44,144037
chr13:30017489-30018488	chr13	+	30017532	30018290	True	NM_015233,NM_003045	chr13,chr13	+,-	MTUS2,SLC7A1	-14806,151585
chr11:64810568-64811883	chr11	+	64810604	64811826	True	NM_005468,NM_013299	chr11,chr11	-,+	NAALADL1,SAC3D1	14233,-2279
chr11:94706761-94706994	chr11	+	94706788	94706969	True	NM_016403,NM_018039	chr11,chr11	-,+	CWC15,KDM4D	-12,2
chr8:103667365-103667711	chr8	+	103667490	103667666	True	NM_024410,NM_005655,NM_001032282	chr8,chr8,chr8	+,-,-	ODF1,KLF10,KLF10	-103693,367,-1322
chr18:44141177-44142042	chr18	+	44141218	44142060	True	NM_152470,NM_001145472	chr18,chr18	+,-	RNF165,LOXHD1	-227082,-1948
chr9:100881845-100882188	chr9	+	100881845	100881974	True	NM_018946,NM_014788,NM_033220,NM_033219	chr9,chr9,chr9,chr9	+,-,-,-	NANS,TRIM14,TRIM14,TRIM14	-62944,-365,-357,-365
chrX:48931151-48931360	chrX	+	48931257	48931385	True	NM_007213,NM_001163323,NM_001029896	chrX,chrX,chrX	-,+,-	PRAF2,CCDC120,WDR45	327,-14785,6229
chr15:85143320-85143737	chr15	+	85143602	85143726	True	NM_017894,NM_001007072,NM_181877,NR_003661	chr15,chr15,chr15,chr15	+,+,+,-	ZSCAN2,ZSCAN2,ZSCAN2,UBE2Q2P1	522,522,522,-29576
chr2:207828868-207830473	chr2	+	207828941	207830365	True	NM_173077,NR_036227	chr2,chr2	+,-	CPO,MIR2355	-24719,144482
chr2:33361385-33363062	chr2	+	33361395	33362931	True	NM_001166264,NM_001166265,NM_001166266,NM_000627,NM_015475	chr2,chr2,chr2,chr2,chr2	+,+,+,+,-	LTBP1,LTBP1,LTBP1,LTBP1,FAM98A	-1782,-1782,-1782,-1782,461482
chr9:95432159-95432428	chr9	+	95432158	95432236	True	NM_022755,NR_036505	chr9,chr9	-,+	IPPK,LOC100128361	361,-51877
chr20:62207318-62208379	chr20	+	62207746	62208187	True	NM_033405,NM_024059,NM_001037335	chr20,chr20,chr20	-,+,-	PRIC285,C20orf195,PRIC285	-8639,-23433,-2154
chrX:138632996-138634406	chrX	+	138633033	138633929	True	NM_000133,NM_001171877	chrX,chrX	+,-	F9,MCF2	-20199,91121
chr9:33509360-33510873	chr9	+	33509571	33510853	True	NR_003667,NR_003573	chr9,chr9	-,+	SUGT1P1,ANXA2P2	367,113369
chr16:67062153-67062612	chr16	+	67062155	67062575	True	NR_024525,NM_001755,NM_022845	chr16,chr16,chr16	-,+,+	FAM96B,CBFB,CBFB	-93835,474,474
chr17:79818587-79818940	chr17	+	79818617	79818841	True	NM_000918,NM_001002244,NM_001185077	chr17,chr17,chr17	-,+,-	P4HB,ANAPC11,ARHGDIA	-73,30757,9999
chr17:28703145-28703754	chr17	+	28703154	28703786	True	NM_206832,NM_001199775,NM_001304	chr17,chr17,chr17	-,+,+	TMIGD1,CPD,CPD	-42089,3709,2155
chr3:136673046-136674325	chr3	+	136673060	136674356	True	NM_144717,NM_005862	chr3,chr3	+,-	IL20RB,STAG1	2350,-201815
chr5:176937444-176939016	chr5	+	176937603	176938865	True	NM_001144875,NM_001174102,NM_024872,NM_001144876,NM_016222	chr5,chr5,chr5,chr5,chr5	-,+,-,-,-	DOK3,PRR7,DOK3,DOK3,DDX41	-176,-62328,-745,-176,5152
chr17:18088663-18089679	chr17	+	18088930	18089653	True	NM_002018,NM_017758	chr17,chr17	-,+	FLII,ALKBH5	72453,-2122
chr4:81256825-81257218	chr4	+	81256881	81257203	True	NM_001145794,NM_152770	chr4,chr4	-,+	ANTXR2,C4orf22	-262404,-58
chr1:153599682-153599958	chr1	+	153599707	153599885	True	NM_015607,NM_001024211,NM_001024212,NM_001024213,NM_006271,NM_001024210,NM_005979	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,-,+,-,-	CHTOP,S100A13,S100A13,S100A13,S100A1,S100A13,S100A13	6639,282,37,-183,987,6733,880
chr11:77781829-77783382	chr11	+	77782042	77783167	True	NM_001204054,NM_001204055,NM_003251,NM_001203260,NM_001203261,NM_001203262,NM_004549	chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,+,-,-,-,-	NDUFC2,NDUFC2,THRSP,NDUFC2-KCTD14,NDUFC2-KCTD14,NDUFC2-KCTD14,NDUFC2	8148,8148,-7193,8148,8148,8148,8148
chr15:45245507-45247250	chr15	+	45245583	45246661	True	NM_014080,NM_152448	chr15,chr15	-,+	DUOX2,C15orf43	159753,2241
chr3:108836952-108837482	chr3	+	108837053	108837395	True	NM_014429,NR_033977	chr3,chr3	-,+	MORC1,FLJ22763	-60,18165
chr5:72744948-72745488	chr5	+	72745107	72745381	True	NM_004472,NM_001037637	chr5,chr5	-,+	FOXD1,BTF3	-755,48868
chr16:28835806-28836249	chr16	+	28835806	28836161	True	NM_007245,NM_003321,NM_145714,NM_148416,NM_148415,NM_148414	chr16,chr16,chr16,chr16,chr16,chr16	+,-,+,+,+,+	ATXN2L,TUFM,ATXN2L,ATXN2L,ATXN2L,ATXN2L	-1443,21627,-1443,-1443,-1443,-1443
chr8:145640320-145640535	chr8	+	145640343	145640547	True	NM_130849,NM_017767,NM_174922,NM_013291	chr8,chr8,chr8,chr8	-,-,+,-	SLC39A4,SLC39A4,ADCK5,CPSF1	1776,1420,-42663,-5610
chr11:102673746-102673958	chr11	+	102673792	102673867	True	NM_001080463,NM_002421,NM_001145938	chr11,chr11,chr11	+,-,-	DYNC2H1,MMP1,MMP1	306292,-4826,-4826
chr15:34268053-34269651	chr15	+	34268441	34269699	True	NM_012125,NM_020371	chr15,chr15	+,-	CHRM5,AVEN	-7416,61660
chr4:154710748-154711169	chr4	+	154710780	154711198	True	NM_003264,NM_003013	chr4,chr4	+,-	TLR2,SFRP2	-105390,-552
chr8:19451881-19452356	chr8	+	19451901	19452115	True	NM_001130518,NM_018142	chr8,chr8	-,+	CSGALNACT1,INTS10	7991,222802
chr19:19325641-19325960	chr19	+	19325641	19325945	True	NM_176880,NM_004386	chr19,chr19	-,+	NR2C2AP,NCAN	-11403,-2910
chr4:7755151-7756014	chr4	+	7755236	7756006	True	NM_001134647,NR_026892	chr4,chr4	-,+	AFAP1,AFAP1-AS1	185697,18
chr19:50527077-50527353	chr19	+	50527140	50527224	True	NM_001025778,NM_001006656,NM_016440,NM_015428	chr19,chr19,chr19,chr19	-,+,-,+	VRK3,ZNF473,VRK3,ZNF473	1631,1987,1631,1987
chr18:44497753-44498508	chr18	+	44497774	44498348	True	NM_173206,NM_004671,NM_031303	chr18,chr18,chr18	-,-,+	PIAS2,PIAS2,KATNAL2	-308,-308,28438
chr7:24324681-24324887	chr7	+	24324692	24324934	True	NM_001127453,NM_000905	chr7,chr7	-,+	DFNA5,NPY	472199,-936
chr4:186733629-186734528	chr4	+	186733635	186734443	True	NM_001145670,NM_001145671,NM_001145672,NM_003603,NM_003265	chr4,chr4,chr4,chr4,chr4	-,-,-,-,+	SORBS2,SORBS2,SORBS2,SORBS2,TLR3	-225,-1410,-1587,-243,255865
chr9:91149054-91150240	chr9	+	91149220	91150190	True	NM_001161625,NM_145283,NM_001100111	chr9,chr9,chr9	+,+,-	NXNL2,NXNL2,LOC286238	-163,-163,116935
chr16:29302813-29303094	chr16	+	29302829	29303061	True	NR_002939,NM_001031827	chr16,chr16	+,-	RUNDC2C,BOLA2	-339,163274
chr11:118781999-118782722	chr11	+	118782097	118782693	True	NM_032966,NM_182557	chr11,chr11	+,-	CXCR5,BCL9L	-18047,-484
chr9:4817110-4818214	chr9	+	4817272	4818261	True	NM_005772,NM_001199853	chr9,chr9	+,-	RCL1,AK3	-24496,-75229
chr3:139077445-139079214	chr3	+	139077558	139079096	True	NM_004766,NM_020191	chr3,chr3	-,+	COPB2,MRPS22	29476,-14749
chr4:84037243-84037971	chr4	+	84037322	84037527	True	NM_016619,NM_001130716,NM_001130715,NM_016129	chr4,chr4,chr4,chr4	-,-,-,+	PLAC8,PLAC8,PLAC8,COPS4	-1411,-6310,-1411,-81137
chr2:207020571-207020841	chr2	+	207020618	207020706	True	NM_001959,NM_005006,NM_001037663,NM_021121,NR_002589,NR_002590,NM_001199984,NM_001199983,NM_001199982,NM_001199981	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,-,+,+,+,+,-,-,-,-	EEF1B2,NDUFS1,EEF1B2,EEF1B2,SNORD51,SNORA41,NDUFS1,NDUFS1,NDUFS1,NDUFS1	3611,3599,3611,3611,5898,6245,3274,3599,3599,3599
chr16:3451655-3452301	chr16	+	3451656	3452178	True	NM_017810,NM_001032292,NM_003450	chr16,chr16,chr16	-,+,+	ZNF434,ZNF174,ZNF174	-631,-517,-517
chr12:56881465-56881791	chr12	+	56881499	56881761	True	NM_013267,NM_207344	chr12,chr12	-,+	GLS2,SPRYD4	470,-19249
chr3:50125731-50126264	chr3	+	50126008	50126250	True	NR_036627,NM_032355,NM_005778	chr3,chr3,chr3	+,-,+	RBM5,MON1A,RBM5	101,-158563,101
chr9:34179431-34180234	chr9	+	34179452	34180240	True	NR_033243,NM_016525,NM_015397,NM_001171204,NM_001171202,NM_001171203,NM_001171201	chr9,chr9,chr9,chr9,chr9,chr9,chr9	+,+,-,+,+,+,+	UBAP1,UBAP1,DCAF12,UBAP1,UBAP1,UBAP1,UBAP1	-500,-500,-52681,-500,-500,-500,-500
chr19:530240-530464	chr19	+	530240	530408	True	NM_182577,NM_004359	chr19,chr19	-,+	ODF3L2,CDC34	-55257,1324
chr9:131466234-131466458	chr9	+	131466253	131466503	True	NM_013355,NM_032799	chr9,chr9	+,-	PKN3,ZDHHC12	-1502,19955
chr17:74101432-74101707	chr17	+	74101627	74101716	True	NM_001013839,NM_015219,NM_001145297,NM_180990,NM_001145299,NM_001145298,NR_028133	chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,+,-,-,-	EXOC7,EXOC7,EXOC7,ZACN,EXOC7,EXOC7,EXOC7	-1759,-1759,-1759,-26415,-1759,-1759,-1975
chr2:220112650-220113113	chr2	+	220112674	220113130	True	NM_006000,NR_026909,NR_003063,NM_001008910,NM_024506	chr2,chr2,chr2,chr2,chr2	-,+,+,+,-	TUBA4A,STK16,TUBA4B,STK16,GLB1L	5558,-2524,4834,-2533,-2543
chr17:20057815-20059027	chr17	+	20057968	20059028	True	NM_007202,NM_001033555,NM_001033554	chr17,chr17,chr17	-,+,+	AKAP10,SPECC1,SPECC1	-176839,373,373
chr19:18435965-18436606	chr19	+	18436052	18436256	True	NM_017712,NM_012321	chr19,chr19	+,-	PGPEP1,LSM4	15151,-2051
chr8:17781664-17782463	chr8	+	17781854	17782503	True	NM_006197,NM_201552	chr8,chr8	+,-	PCM1,FGL1	-1546,-28807
chr3:183872645-183872943	chr3	+	183872656	183872794	True	NM_005787,NM_004423	chr3,chr3	-,+	ALG3,DVL3	94015,489
chrX:71527276-71527718	chrX	+	71527293	71527749	True	NM_004143,NM_001170747,NM_001144885,NM_001144886,NM_001144887	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	CITED1,PIN4,CITED1,CITED1,CITED1	-456,-125819,-1529,-256,-1529
chr4:170529102-170529929	chr4	+	170529160	170529933	True	NM_001199398,NM_001199399,NM_001829,NM_001199397,NM_012224,NM_001199400	chr4,chr4,chr4,chr4,chr4,chr4	-,-,+,-,-,-	NEK1,NEK1,CLCN3,NEK1,NEK1,NEK1	3896,3896,11788,3896,3896,3896
chr18:5545389-5546301	chr18	+	5545405	5545837	True	NM_012307,NR_015389	chr18,chr18	-,+	EPB41L3,LOC339290	-1419,-307357
chr10:124536807-124537258	chr10	+	124536810	124537177	True	NM_022034,NR_003570	chr10,chr10	-,+	CUZD1,FLJ46361	68565,-20651
chr1:3370574-3370805	chr1	+	3370582	3370832	True	NR_030277,NM_014448	chr1,chr1	-,+	MIR551A,ARHGEF16	106572,314
chr11:61449174-61449577	chr11	+	61449304	61449620	True	NR_026882,NM_006133	chr11,chr11	-,+	DKFZP434K028,DAGLA	75566,-1450
chrX:154843358-154844679	chrX	+	154843467	154844697	True	NM_018196,NM_005840	chrX,chrX	-,+	TMLHE,SPRY3	-845,152753
chrX:122319600-122319972	chrX	+	122319647	122320013	True	NM_007325,NM_000828,NM_001081550	chrX,chrX,chrX	+,+,-	GRIA3,GRIA3,THOC2	-1603,-1603,546945
chr2:119985065-119985699	chr2	+	119985079	119985735	True	NM_182528,NM_001008410,NM_018234,NM_182915	chr2,chr2,chr2,chr2	-,+,+,+	C1QL2,STEAP3,STEAP3,STEAP3	-68608,-3746,-3746,-3746
chr12:11323068-11323788	chr12	+	11323179	11323749	True	NR_036583,NR_037918	chr12,chr12	+,-	LOC100129361,PRH1-PRR4	30,525
chr19:49148405-49148619	chr19	+	49148436	49148502	True	NM_001217,NM_001352,NR_004401	chr19,chr19,chr19	-,-,+	CA11,DBP,SEC1	999,-7797,-7192
chr19:14630844-14631412	chr19	+	14630910	14631408	True	NR_038104,NM_006145,NM_138501,NR_038103,NR_030369	chr19,chr19,chr19,chr19,chr19	+,-,+,+,+	TECR,DNAJB1,TECR,TECR,MIR639	8970,-1709,8970,8970,8946
chr7:45026314-45026595	chr7	+	45026387	45026643	True	NR_002952,NR_003697,NM_033054,NR_030770	chr7,chr7,chr7,chr7	-,-,-,+	SNORA9,C7orf40,MYO1G,CCM2	-1278,-128,-7683,12701
chr13:47371047-47371301	chr13	+	47371104	47371282	True	NM_001164213,NM_001984	chr13,chr13	+,-	LRCH1,ESD	-243859,135
chr12:71283106-71284023	chr12	+	71283197	71284040	True	NM_002849,NM_014505	chr12,chr12	-,+	PTPRR,KCNMB4	30603,-523193
chr1:9005084-9005717	chr1	+	9005166	9005748	True	NM_001215,NM_001428	chr1,chr1	+,-	CA6,ENO1	173,-66015
chr12:58122081-58122339	chr12	+	58122119	58122307	True	NM_001122772,NR_027032	chr12,chr12	-,+	AGAP2,LOC100130776	9772,-2150
chr13:19522879-19523300	chr13	+	19522914	19523348	True	NR_027995,NR_026852	chr13,chr13	-,+	LOC284232,LOC348021	-76805,59050
chr12:10767622-10767912	chr12	+	10767894	10767956	True	NM_007334,NM_018048	chr12,chr12	+,-	KLRD1,MAGOHB	-307532,-1686
chr1:233746957-233747835	chr1	+	233746976	233747804	True	NM_002245,NM_014801	chr1,chr1	+,-	KCNK1,PCNXL2	1945,-315517
chr20:38820819-38821019	chr20	+	38820830	38821028	True	NM_003286,NM_005461	chr20,chr20	+,-	TOP1,MAFB	836433,496898
chr7:8009860-8010121	chr7	+	8009878	8010140	True	NM_138426,NM_002947	chr7,chr7	+,-	GLCCI1,RPA3	-1510,-251640
chr1:202311283-202311778	chr1	+	202311282	202311654	True	NM_014176,NM_001167858,NM_002481,NM_001167857	chr1,chr1,chr1,chr1	-,+,+,+	UBE2T,PPP1R12B,PPP1R12B,PPP1R12B	-188,6175,6175,6175
chr1:179846977-179848831	chr1	+	179847052	179848654	True	NM_015602,NM_145034,NM_001199260,NM_022347	chr1,chr1,chr1,chr1	+,-,-,-	TOR1AIP1,TOR1AIP2,TOR1AIP2,TOR1AIP2	2765,-111,-111,-111
chr11:66116459-66117481	chr11	+	66116465	66116987	True	NM_015399,NM_006876,NM_001024957,NM_153266	chr11,chr11,chr11,chr11	-,-,-,+	BRMS1,B3GNT1,BRMS1,TMEM151A	-3883,-1304,-3883,-57154
chr19:34974494-34975123	chr19	+	34974500	34974824	True	NR_027620,NM_001080436	chr19,chr19	-,+	LOC643719,WTIP	93822,-1671
chr10:89619638-89620174	chr10	+	89619805	89620211	True	NM_000314,NM_001126049	chr10,chr10	+,-	PTEN,KLLN	2983,3033
chr1:15767122-15767949	chr1	+	15767177	15767961	True	NM_001229,NM_007272	chr1,chr1	-,+	CASP9,CTRC	83029,-2290
chr5:157415708-157417572	chr5	+	157416035	157417106	True	NM_014666,NM_173491	chr5,chr5	-,+	CLINT1,LSM11	-129852,-245331
chr14:24711973-24712194	chr14	+	24711975	24712213	True	NM_001099274,NM_012461,NM_001002002,NM_016576	chr14,chr14,chr14,chr14	-,-,+,+	TINF2,TINF2,GMPR2,GMPR2	-95,-95,-9923,-9923
chr7:2396091-2397615	chr7	+	2396520	2397616	True	NM_013321,NM_001037283,NM_003751	chr7,chr7,chr7	-,+,+	SNX8,EIF3B,EIF3B	-42421,-2098,-2098
chr12:54394538-54396352	chr12	+	54395032	54396366	True	NR_029617,NM_006897,NM_022658,NR_003716	chr12,chr12,chr12,chr12	+,+,+,-	MIR196A2,HOXC9,HOXC8,HOTAIR	-9562,-1207,6523,-32517
chr13:19921839-19923299	chr13	+	19921940	19923316	True	NR_034026,NR_027248	chr13,chr13	+,-	LOC100287114,ANKRD26P3	-2802,-2827
chr1:36863690-36863976	chr1	+	36863802	36863959	True	NM_032881,NM_024676	chr1,chr1	-,+	LSM10,SH3D21	-309,-91146
chr3:113143205-113143818	chr3	+	113143369	113143847	True	NM_017699,NM_001164496	chr3,chr3	+,-	SIDT1,WDR52	107370,16564
chr14:76129509-76130399	chr14	+	76129543	76130078	True	NM_015072,NM_007176	chr14,chr14	+,-	TTLL5,C14orf1	-2045,-2005
chr1:44496786-44496990	chr1	+	44496790	44496946	True	NM_001024845,NM_152499	chr1,chr1	-,+	SLC6A9,CCDC24	238,-39561
chr12:6658441-6659160	chr12	+	6658586	6659134	True	NM_001039670,NM_001193457,NM_080730,NR_036467,NM_002046	chr12,chr12,chr12,chr12,chr12	-,-,-,-,+	IFFO1,IFFO1,IFFO1,IFFO1,GAPDH	6165,6165,6165,6165,-14980
chr17:56268783-56268992	chr17	+	56268818	56269034	True	NM_000502,NM_017777	chr17,chr17	+,-	EPX,MKS1	1054,27682
chr4:48783541-48785165	chr4	+	48783577	48784411	True	NM_001079840,NM_015030	chr4,chr4	+,-	OCIAD1,FRYL	48648,-1261
chr9:77113893-77114139	chr9	+	77113902	77114136	True	NM_006914,NM_001177311	chr9,chr9	+,-	RORB,TRPM6	-1701,388177
chr3:113465581-113465971	chr3	+	113465615	113465690	True	NM_001690,NM_025146	chr3,chr3	+,-	ATP6V1A,NAA50	175,-495
chr8:104387124-104388037	chr8	+	104387135	104388004	True	NM_138455,NM_030780	chr8,chr8	+,-	CTHRC1,SLC25A32	-3412,39515
chr19:51330211-51330797	chr19	+	51330288	51330636	True	NM_138564,NM_001030050,NM_138563,NM_002257,NM_017509	chr19,chr19,chr19,chr19,chr19	-,+,-,-,-	KLK15,KLK3,KLK15,KLK1,KLK15	4193,27534,4193,-3245,4193
chr8:54792338-54792625	chr8	+	54792363	54792625	True	NM_003702,NM_213619	chr8,chr8	+,-	RGS20,ATP6V1H	816,-36513
chr9:139738454-139738659	chr9	+	139738512	139738578	True	NM_003792,NM_206920,NM_014172,NM_001080482,NM_001135861	chr9,chr9,chr9,chr9,chr9	-,+,+,+,+	EDF1,MAMDC4,PHPT1,C9orf172,PHPT1	22210,8240,4677,288,4677
chr17:79010198-79010829	chr17	+	79010405	79010865	True	NM_001144888,NR_026857,NM_017450,NM_017451,NM_006340	chr17,chr17,chr17,chr17,chr17	+,-,+,+,+	BAIAP2,FLJ90757,BAIAP2,BAIAP2,BAIAP2	-1509,-1886,-1509,-1509,-1509
chr7:99746986-99747244	chr7	+	99747054	99747190	True	NM_018275,NM_001008395	chr7,chr7	-,+	C7orf43,C7orf59	9162,-575
chr1:12225312-12225728	chr1	+	12225434	12225706	True	NM_001066,NM_138346	chr1,chr1	+,-	TNFRSF1B,KIAA2013	1353,-238949
chr7:29233569-29233771	chr7	+	29233573	29233741	True	NM_004067,NM_031311	chr7,chr7	+,-	CHN2,CPVL	379,-47420
chr19:8581281-8583102	chr19	+	8581642	8583125	True	NM_001146175,NM_032370,NM_031203	chr19,chr19,chr19	-,-,+	ZNF414,ZNF414,HNRNPM	-2594,-2594,-71895
chr10:47656627-47657863	chr10	+	47656652	47657537	True	NR_003601,NR_024495	chr10,chr10	+,-	ANTXRL,LOC642826	696,-413158
chr17:19268264-19268914	chr17	+	19268332	19268958	True	NM_015681,NM_139032	chr17,chr17	-,+	B9D1,MAPK7	-2286,12075
chr7:30544601-30544864	chr7	+	30544712	30544864	True	NR_037669,NM_001199815,NM_001199817,NM_001199816,NM_024051,NM_002047	chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,+	GGCT,GGCT,GGCT,GGCT,GGCT,GARS	-255,-255,-255,-255,-255,89316
chr5:43039951-43040480	chr5	+	43039987	43040515	True	NM_001014279,NR_015447	chr5,chr5	-,+	C5orf39,LOC153684	-18,1720
chr17:48250418-48251257	chr17	+	48250473	48251279	True	NR_024192,NR_024193,NM_001135697,NM_000023	chr17,chr17,chr17,chr17	-,-,+,+	HILS1,HILS1,SGCA,SGCA	-636,-636,-7159,-7159
chr16:70382248-70383139	chr16	+	70382945	70383187	True	NM_018332,NM_001605	chr16,chr16	+,-	DDX19A,AARS	-2173,-59533
chr20:900195-901617	chr20	+	900348	901490	True	NM_015985,NM_031424	chr20,chr20	-,+	ANGPT4,FAM110A	-3388,-75114
chr1:93938914-93939722	chr1	+	93938968	93939490	True	NR_034089,NM_017737	chr1,chr1	-,+	LOC100131564,FNBP1L	-127600,-25338
chr17:19620261-19620766	chr17	+	19620279	19620805	True	NM_001099646,NM_000382,NM_152908	chr17,chr17,chr17	-,+,-	SLC47A2,ALDH3A2,SLC47A2	-236,-68266,-236
chr4:1284293-1284729	chr4	+	1284316	1284748	True	NM_001328,NM_001017405,NM_005882	chr4,chr4,chr4	-,+,+	CTBP1,MAEA,MAEA	-41408,-695,-695
chr4:2420876-2421177	chr4	+	2420978	2421162	True	NM_001193282,NM_001172656,NM_001172657,NM_001172658,NM_020972	chr4,chr4,chr4,chr4,chr4	+,-,-,-,-	LOC402160,ZFYVE28,ZFYVE28,ZFYVE28,ZFYVE28	-328,-608,-608,-608,-608
chrX:97993038-97994049	chrX	+	97993088	97993839	True	NM_022144,NR_024608	chrX,chrX	+,-	TNMD,LOC442459	1845950,1201053
chr17:41798260-41798521	chr17	+	41798342	41798418	True	NM_025237,NM_001136483	chr17,chr17	-,+	SOST,C17orf105	37788,59384
chr7:30030443-30031924	chr7	+	30030653	30031935	True	NM_001197026,NM_001145513,NM_001145515,NM_001145514,NM_014766	chr7,chr7,chr7,chr7,chr7	+,-,-,-,-	PLEKHA8,SCRN1,SCRN1,SCRN1,SCRN1	36041,-919,-1228,-748,-1228
chr14:50470985-50472701	chr14	+	50471537	50472724	True	NM_001012706,NM_001663	chr14,chr14	-,+	C14orf182,ARF6	1564,-111861
chr11:102573540-102573829	chr11	+	102573575	102573845	True	NM_001166,NM_022122	chr11,chr11	+,-	BIRC2,MMP27	-355660,2673
chr6:117248556-117249206	chr6	+	117248568	117248829	True	NM_148963,NM_173560	chr6,chr6	-,+	GPRC6A,RFX6	-98370,-50243
chr2:239832590-239833047	chr2	+	239832612	239833032	True	NR_034162,NM_057179	chr2,chr2	-,+	FLJ43879,TWIST2	14983,-75990
chr6:117118643-117119900	chr6	+	117118737	117119738	True	NM_148963,NM_173560	chr6,chr6	-,+	GPRC6A,RFX6	30517,78637
chr2:48119604-48120185	chr2	+	48119628	48120083	True	NM_025133,NM_000179	chr2,chr2	-,+	FBXO11,MSH6	-3770,-109471
chr2:74731105-74731324	chr2	+	74731136	74731368	True	NR_024606,NM_001009812,NM_032673	chr2,chr2,chr2	+,-,-	LOC151534,LBX2,PCGF1	-1443,-693,3503
chr3:196444094-196444954	chr3	+	196444184	196444832	True	NM_017861,NM_032898,NM_001166304	chr3,chr3,chr3	+,-,+	PIGX,C3orf34,PIGX	-5001,-5061,-5001
chr11:114309409-114310119	chr11	+	114309630	114310089	True	NM_015523,NM_019021	chr11,chr11	+,-	REXO2,C11orf71	18,-38491
chr7:43804678-43805144	chr7	+	43804699	43804846	True	NM_000712,NM_018224	chr7,chr7	+,-	BLVRA,C7orf44	-6485,-35616
chr1:114355157-114355627	chr1	+	114355227	114355599	True	NR_037864,NM_018364	chr1,chr1	+,-	LOC100287722,RSBN1	43657,-157
chr6:151565379-151566674	chr6	+	151565683	151566346	True	NM_005100,NM_020861	chr6,chr6	+,-	AKAP12,ZBTB2	-4600,146389
chr9:74384834-74386189	chr9	+	74385036	74385849	True	NM_001135820,NM_013390,NM_182505	chr9,chr9,chr9	-,-,+	TMEM2,TMEM2,C9orf85	-1236,-1236,140573
chr15:74493828-74494570	chr15	+	74493937	74494319	True	NM_001199042,NM_001199040,NM_022369,NM_001142619,NM_001142618,NM_001142617,NM_001142620,NM_201526,NM_001199041	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,-,-,-,-,-,+,-	STRA6,STRA6,STRA6,STRA6,STRA6,STRA6,STRA6,ISLR,STRA6	951,7777,951,7102,1287,7102,7102,-27083,6126
chr2:89089443-89090339	chr2	+	89089443	89089947	True	NM_004836,NR_015424	chr2,chr2	-,+	EIF2AK3,ANKRD36BP2	-162349,-24083
chr2:89089443-89090339	chr2	-	98151173	98151223	False	NM_025190,NM_001862	chr2,chr2	-,+	ANKRD36B,COX5B	55255,111297
chr8:145065454-145065800	chr8	+	145065728	145065790	True	NM_000837,NM_032789,NM_001009184	chr8,chr8,chr8	+,-,+	GRINA,PARP10,GRINA	-1553,-5093,-1553
chr1:67597020-67597558	chr1	+	67597105	67597445	True	NM_001013674,NM_144701	chr1,chr1	-,+	C1orf141,IL23R	-2885,34723
chr7:90451079-90452807	chr7	+	90451153	90452823	True	NM_006980,NM_012395	chr7,chr7	-,+	MTERF,CDK14	1057243,-112492
chr12:13098231-13099682	chr12	+	13098231	13099730	True	NM_018654,NR_030345	chr12,chr12	-,+	GPRC5D,MIR614	3638,-29527
chr7:27279455-27279793	chr7	+	27279561	27279759	True	NM_001989,NM_000522	chr7,chr7	+,-	EVX1,HOXA13	2404,-39836
chr17:74452335-74453417	chr17	+	74452446	74453074	True	NM_022066,NM_001166579	chr17,chr17	-,+	UBE2O,AANAT	-3158,-3075
chr11:67071448-67071665	chr11	+	67071575	67071639	True	NM_021173,NM_017857	chr11,chr11	-,+	POLD4,SSH3	49463,-707
chr19:4518176-4518480	chr19	+	4518252	4518528	True	NM_032631,NM_001080400	chr19,chr19	+,-	HDGFRP2,PLIN4	-46048,-536
chrX:55515337-55515917	chrX	+	55515388	55515942	True	NM_014061,NM_201286	chrX,chrX	+,-	MAGEH1,USP51	-36901,-123
chr11:65688110-65688855	chr11	+	65688207	65688611	True	NM_031450,NM_001135635,NM_006442	chr11,chr11,chr11	-,-,+	C11orf68,C11orf68,DRAP1	-1676,-1676,-1530
chr9:6410740-6411468	chr9	+	6410763	6411314	True	NM_000170,NM_152896	chr9,chr9	-,+	GLDC,UHRF2	234433,1836
chr2:242255649-242256023	chr2	+	242255739	242255959	True	NM_005336,NM_006155,NM_001008491,NM_001008492,NM_004404	chr2,chr2,chr2,chr2,chr2	-,+,+,+,+	HDLBP,SEPT2,SEPT2,SEPT2,SEPT2	-485,-1067,-1067,-509,-509
chr1:201184734-201185182	chr1	+	201184931	201185155	True	NM_001164586,NM_016456	chr1,chr1	+,-	IGFN1,TMEM9	-25029,-61299
chr12:77457426-77458946	chr12	+	77457499	77458779	True	NM_203394,NM_015336	chr12,chr12	-,+	E2F7,ZDHHC17	631,-299696
chr5:17218407-17218697	chr5	+	17218444	17218696	True	NR_027253,NM_006317	chr5,chr5	-,+	LOC285696,BASP1	-913,-745
chr20:2782857-2783086	chr20	+	2782983	2783134	True	NM_080739,NM_001184699,NM_019609	chr20,chr20,chr20	+,-,-	C20orf141,CPXM1,CPXM1	12522,-1691,-1691
chr17:79358114-79358913	chr17	+	79358265	79358825	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	14714,-53791
chr5:77573522-77574228	chr5	+	77573603	77574063	True	NM_003664,NM_004866	chr5,chr5	-,+	AP3B1,SCAMP1	16527,82275
chr1:16084841-16085119	chr1	+	16084858	16084960	True	NM_001024215,NM_001024216,NM_001089591,NM_017556	chr1,chr1,chr1,chr1	+,+,-,+	FBLIM1,FBLIM1,UQCRHL,FBLIM1	6033,6498,49284,294
chr14:23283615-23285561	chr14	+	23283852	23285162	True	NM_178336,NM_001126105,NM_003982,NM_001126106	chr14,chr14,chr14,chr14	+,-,-,-	MRPL52,SLC7A7,SLC7A7,SLC7A7	13929,-40,-40,3902
chr2:170442421-170443601	chr2	+	170442688	170443432	True	NM_004792,NM_024622	chr2,chr2	+,-	PPIG,FASTKD1	-1902,-12264
chr17:58229275-58230009	chr17	+	58229291	58229846	True	NM_000717,NR_027408	chr17,chr17	+,-	CA4,LOC653653	-2040,-49011
chr7:44789259-44789662	chr7	+	44789348	44789684	True	NM_174929,NM_031449,NM_138635	chr7,chr7,chr7	+,+,-	ZMIZ2,ZMIZ2,H2AFV	6102,-875,98091
chr19:41197298-41197523	chr19	+	41197491	41197567	True	NM_025194,NM_004756	chr19,chr19	+,-	ITPKC,NUMBL	25440,-935
chr6:131976745-131977627	chr6	+	131976800	131977635	True	NM_004830,NM_005021	chr6,chr6	-,+	MED23,ENPP3	-27437,-18416
chr2:69975433-69976251	chr2	+	69976141	69976287	True	NM_001153,NM_014911	chr2,chr2	+,-	ANXA4,AAK1	-7068,-105164
chr17:58752958-58753954	chr17	+	58753171	58753595	True	NM_017679,NM_001099432,NM_006380	chr17,chr17,chr17	+,+,-	BCAS3,BCAS3,APPBP2	1576,1576,-149591
chr5:176738166-176738366	chr5	+	176738166	176738308	True	NM_130781,NM_013237,NM_001142935,NM_031300,NM_001031677	chr5,chr5,chr5,chr5,chr5	-,+,-,-,-	RAB24,PRELID1,MXD3,MXD3,RAB24	-7422,-7383,1034,1034,-7422
chr10:127408563-127409098	chr10	+	127408606	127408898	True	NM_001202438,NM_015608,NR_033847	chr10,chr10,chr10	+,+,-	C10orf137,C10orf137,FLJ37035	-574,-574,-544
chr1:75597357-75597854	chr1	+	75597409	75597855	True	NM_001001933,NM_001889	chr1,chr1	+,-	LHX8,CRYZ	-3341,-398317
chr19:13614651-13615363	chr19	+	13614657	13615271	True	NM_001127222,NM_001127221,NM_000068,NM_001174080,NM_023035,NM_030818	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,+	CACNA1A,CACNA1A,CACNA1A,CACNA1A,CACNA1A,CCDC130	2053,2053,2053,2053,2053,243481
chr1:45275112-45275338	chr1	+	45275118	45275386	True	NM_001013632,NM_004073,NM_001136537	chr1,chr1,chr1	-,+,+	TCTEX1D4,PLK3,BTBD19	-2161,-9133,-1015
chr21:31128621-31129152	chr21	+	31128718	31129159	True	NM_175611,NR_027021	chr21,chr21	-,+	GRIK1,GRIK1-AS1	183173,-8275
chr19:58901246-58902531	chr19	+	58902019	58902417	True	NM_001195135,NM_138466,NM_001009,NM_001129730	chr19,chr19,chr19,chr19	+,-,+,-	LOC646862,ZNF837,RPS5,ZNF837	5039,-9630,-3438,-9630
chr3:185303158-185303485	chr3	+	185303158	185303466	True	NM_021627,NM_139248	chr3,chr3	+,-	SENP2,LIPH	564,-32789
chr1:26560951-26561323	chr1	+	26561165	26561309	True	NM_022778,NM_001077262	chr1,chr1	+,-	CCDC21,UBXN11	-523,71936
chr7:5937632-5938267	chr7	+	5937840	5938267	True	NM_001099697,NM_015622	chr7,chr7	-,+	RSPH10B2,CCZ1	72097,73
chr7:5937632-5938267	chr7	-	6866036	6866427	False	NM_198097,NM_173565	chr7,chr7	-,+	C7orf28B,RSPH10B	-110,-72347
chr15:63674213-63674464	chr15	+	63674294	63674494	True	NM_206925,NM_001218,NM_031301	chr15,chr15,chr15	-,-,+	CA12,CA12,APH1B	-219,-219,-104596
chr7:3339507-3339829	chr7	+	3339527	3339793	True	NM_152744,NM_032415	chr7,chr7	+,-	SDK1,CARD11	1286,-256018
chr8:40011032-40011512	chr8	+	40011054	40011485	True	NM_020130,NM_001464	chr8,chr8	+,-	C8orf4,ADAM2	-116,-315275
chr5:140070657-140070890	chr5	+	140070680	140070936	True	NM_012208,NM_002109,NM_144723	chr5,chr5,chr5	+,-,+	HARS2,HARS,ZMAT2	81,85,9095
chr10:44069084-44069367	chr10	+	44069115	44069398	True	NM_001099284,NM_001099283,NM_001099282,NM_145312,NM_005674	chr10,chr10,chr10,chr10,chr10	-,-,-,+,-	ZNF239,ZNF239,ZNF239,ZNF485,ZNF239	718,718,717,32456,-5208
chr1:247651630-247653344	chr1	+	247651630	247653136	True	NM_001004492,NM_001004698	chr1,chr1	-,+	OR2B11,OR2W5	-36346,1233
chr15:50400272-50401211	chr15	+	50400501	50401109	True	NM_001159629,NM_024837	chr15,chr15	+,-	SLC27A2,ATP8B4	73283,10360
chr1:44401657-44401888	chr1	+	44401707	44401827	True	NM_057090,NM_001136215,NM_006934,NM_057091	chr1,chr1,chr1,chr1	+,+,-,+	ARTN,ARTN,SLC6A9,ARTN	-2766,-2766,81220,-2766
chr2:241835868-241836075	chr2	+	241836000	241836116	True	NM_024861,NM_001085437,NM_000030	chr2,chr2,chr2	-,-,+	C2orf54,C2orf54,AGXT	-4548,-427,-27889
chr11:3663954-3664200	chr11	+	3663972	3664244	True	NM_001079536,NM_053017,NM_004314	chr11,chr11,chr11	-,-,+	ART5,ART5,ART1	-426,-487,2116
chr8:10528269-10528805	chr8	+	10528404	10528716	True	NM_001040032,NM_178857	chr8,chr8	+,-	C8orf74,RP1L1	1430,-15787
chr5:74067533-74068040	chr5	+	74067724	74067952	True	NM_014886,NM_032380,NM_170681,NM_170691	chr5,chr5,chr5,chr5	+,-,-,-	NSA2,GFM2,GFM2,GFM2	-4680,-4682,-4682,-4682
chr11:60692517-60693631	chr11	+	60692723	60693522	True	NM_014502,NM_017870,NM_178031	chr11,chr11,chr11	-,+,+	PRPF19,TMEM132A,TMEM132A	-18662,-861,-861
chr5:137775292-137775637	chr5	+	137775317	137775525	True	NM_004730,NM_016606	chr5,chr5	-,+	ETF1,REEP2	103457,-592
chr20:36325439-36326758	chr20	+	36325814	36326792	True	NM_006698,NM_030877	chr20,chr20	-,+	BLCAP,CTNNBL1	-169481,-3431
chr12:50353648-50354048	chr12	+	50353725	50353986	True	NM_000486,NM_001651,NR_026948	chr12,chr12,chr12	+,+,-	AQP2,AQP5,LOC283332	-9252,1292,-48079
chr12:43072371-43073068	chr12	+	43072550	43073113	True	NM_016488,NM_153026	chr12,chr12	+,-	PPHLN1,PRICKLE1	-352654,-88978
chr19:16276823-16277954	chr19	+	16277179	16277621	True	NM_014077,NM_054113	chr19,chr19	+,-	FAM32A,CIB3	18613,6723
chr1:33934898-33936411	chr1	+	33935082	33936253	True	NM_145238,NM_198040	chr1,chr1	+,-	ZSCAN20,PHC2	1978,-93888
chr3:164912510-164913179	chr3	+	164912524	164913180	True	NM_001122752,NM_014926	chr3,chr3	+,-	SERPINI1,SLITRK3	2540251,1339
chr14:65290182-65290398	chr14	+	65290182	65290414	True	NM_001204063,NM_000347,NM_001024858	chr14,chr14,chr14	+,-,-	CHURC1,SPTB,SPTB	90664,-316,-316
chr14:21152234-21152818	chr14	+	21152290	21152826	True	NM_001097577,NM_002937,NM_001145,NM_194431,NM_001001968	chr14,chr14,chr14,chr14,chr14	+,+,+,+,-	ANG,RNASE4,ANG,RNASE4,OR6S1	4105,17,-5,4105,-42440
chr5:72969719-72971277	chr5	+	72970017	72971185	True	NM_001177693,NM_023039	chr5,chr5	+,-	RGNEF,ANKRA2	-48087,-108506
chr9:139876453-139876838	chr9	+	139876565	139876639	True	NM_000954,NM_004669,NM_207510	chr9,chr9,chr9	+,-,+	PTGDS,CLIC3,LCNL1	-4660,14435,805
chr7:5861481-5862607	chr7	+	5862415	5862549	True	NM_207116,NR_023382	chr7,chr7	-,+	RNF216,ZNF815	-41054,241
chr18:74964220-74964695	chr18	+	74964226	74964557	True	NM_001480,NM_001025100	chr18,chr18	+,-	GALR1,MBP	-2269,-119452
chr9:35603642-35604089	chr9	+	35603672	35604086	True	NM_001782,NM_006285	chr9,chr9	-,+	CD72,TESK1	14388,1194
chr22:38093205-38093496	chr22	+	38093226	38093422	True	NM_006498,NM_001039141	chr22,chr22	-,+	LGALS2,TRIOBP	-117202,-295
chr13:78292578-78293007	chr13	+	78292648	78293066	True	NR_037438,NM_001040153	chr13,chr13	-,+	MIR3665,SLAIN1	-20397,-20235
chr13:31314304-31315350	chr13	+	31314525	31315183	True	NM_001629,NM_002128	chr13,chr13	+,-	ALOX5AP,HMGB1	-4931,-274444
chr5:113787516-113788353	chr5	+	113787613	113788302	True	NM_170775,NM_018700	chr5,chr5	+,-	KCNN2,TRIM36	-18444,728005
chr20:48745571-48746206	chr20	+	48745627	48746225	True	NM_005194,NM_199144	chr20,chr20	+,-	CEBPB,UBE2V1	61150,-13133
chr19:3522504-3522715	chr19	+	3522511	3522761	True	NM_001136197,NM_001145165,NM_001136198	chr19,chr19,chr19	+,-,+	FZR1,DOHH,FZR1	192,-21573,192
chr9:116358536-116359444	chr9	+	116358641	116359389	True	NM_017443,NM_144489	chr9,chr9	-,+	POLE3,RGS3	-185612,-2493
chr11:115376707-115376969	chr11	+	115376839	115376947	True	NM_001098517,NM_182495,NM_014333	chr11,chr11,chr11	-,+,-	CADM1,FAM55B,CADM1	-1598,-827690,-1598
chr19:4399171-4399565	chr19	+	4399335	4399540	True	NM_001199943,NM_003025,NM_005483,NM_001199944	chr19,chr19,chr19,chr19	-,-,+,-	SH3GL1,SH3GL1,CHAF1A,SH3GL1	1076,1076,3119,926
chr12:10274529-10275255	chr12	+	10274715	10275080	True	NM_197949,NM_197948,NM_153022,NM_197954,NM_022570,NM_197950,NM_197947	chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,-,+,-,-,-,-	CLEC7A,CLEC7A,C12orf59,CLEC7A,CLEC7A,CLEC7A,CLEC7A	7841,7841,56476,7841,7841,7841,7841
chr6:12716109-12717125	chr6	+	12716291	12717087	True	NM_001143964,NM_030948	chr6,chr6	-,+	TBC1D7,PHACTR1	611750,745
chr3:51745103-51745319	chr3	+	51745129	51745311	True	NM_001143833,NM_001130063,NM_000839	chr3,chr3,chr3	-,+,+	IQCF6,GRM2,GRM2	67942,-4099,-4099
chr4:9497355-9497835	chr4	+	9497815	9497883	True	NR_031688,NM_001040448	chr4,chr4	-,+	MIR548I2,DEFB131	60104,-51606
chr1:35218453-35219502	chr1	+	35218574	35219536	True	NM_001164824,NM_153212,NM_005268	chr1,chr1,chr1	-,+,+	C1orf212,GJB4,GJB5	105160,5805,1184
chr12:58211454-58212444	chr12	+	58211483	58212443	True	NR_029847,NM_001172697,NM_006576	chr12,chr12,chr12	-,+,-	MIR26A2,TSFM,AVIL	6082,-35006,-1631
chr5:86180092-86180718	chr5	+	86180120	86180744	True	NR_036243,NR_037402	chr5,chr5	-,+	MIR4280,MIR3607	230077,-263857
chr20:60981413-60981907	chr20	+	60981480	60981542	True	NM_001024,NM_031215	chr20,chr20	+,-	RPS21,CABLES2	-19410,847
chr16:80574084-80574540	chr16	+	80574149	80574567	True	NM_152342,NM_130897	chr16,chr16	-,+	CDYL2,DYNLRB2	263658,286
chr11:46260864-46261755	chr11	+	46261137	46261781	True	NM_016621,NM_052854	chr11,chr11	-,+	PHF21A,CREB3L1	-118152,37446
chr3:48884082-48884612	chr3	+	48884190	48884588	True	NM_006321,NM_004157	chr3,chr3	+,-	ARIH2,PRKAR2A	71692,732
chr3:48662375-48662764	chr3	+	48662432	48662808	True	NM_001040454,NM_033629,NM_001008269	chr3,chr3,chr3	-,+,-	SLC26A6,TREX1,TMEM89	8521,-155254,-3243
chrX:70753813-70754808	chrX	+	70753997	70754760	True	NM_181672,NM_181673,NR_002226	chrX,chrX,chrX	+,+,-	OGT,OGT,INGX	-1136,-1136,-41393
chr1:216896647-216896850	chr1	+	216896699	216896855	True	NM_001438,NR_024099,NM_138796	chr1,chr1,chr1	-,-,+	ESRRG,ESRRG,SPATA17	2,-10,907839
chr5:68614128-68614845	chr5	+	68614631	68614765	True	NM_176816,NM_133343	chr5,chr5	-,+	CCDC125,RAD17	1701,50358
chr1:210410879-210411454	chr1	+	210410906	210411370	True	NR_024337,NM_019605	chr1,chr1	-,+	C1orf133,SERTAD4	-3440,-4768
chr1:89148542-89150030	chr1	+	89148777	89149688	True	NM_001514,NM_006256	chr1,chr1	-,+	GTF2B,PKN2	207663,233
chr1:6662029-6662519	chr1	+	6662071	6662435	True	NM_014851,NM_153812	chr1,chr1	-,+	KLHL21,PHF13	544,11320
chr3:15106550-15106844	chr3	+	15106588	15106856	True	NM_022497,NM_003298	chr3,chr3	-,+	MRPS25,NR2C2	10,-117403
chr17:4165647-4165896	chr17	+	4165818	4165878	True	NM_016376,NM_020740,NR_023347	chr17,chr17,chr17	-,-,+	ANKFY1,ANKFY1,CYB5D2	1446,1446,-119407
chr22:41683912-41684466	chr22	+	41684054	41684508	True	NM_017590,NM_002883	chr22,chr22	+,-	ZC3H7B,RANGAP1	13058,-1838
chr12:88510673-88511735	chr12	+	88510782	88511352	True	NM_025114,NM_181783	chr12,chr12	-,+	CEP290,TMTC3	24702,24720
chr11:74949881-74950094	chr11	+	74949949	74950057	True	NM_001195528,NR_029891	chr11,chr11	+,-	LOC441617,MIR326	1892,96223
chr17:79007876-79008121	chr17	+	79007909	79007981	True	NM_001144888,NR_026857,NM_017450,NM_017451,NM_006340	chr17,chr17,chr17,chr17,chr17	+,-,+,+,+	BAIAP2,FLJ90757,BAIAP2,BAIAP2,BAIAP2	965,588,965,965,965
chr15:21360714-21361176	chr15	+	21360713	21361027	True	NR_027411,NR_028506	chr15,chr15	+,-	GOLGA8C,NF1P1	-593090,-226088
chr15:21360714-21361176	chr15	+	20354134	20354430	False	NR_036432,NR_027411	chr15,chr15	-,+	HERC2P3,GOLGA8C	357053,413243
chr1:225841455-225841682	chr1	+	225841532	225841722	True	NM_001130440,NM_018212,NM_001008493	chr1,chr1,chr1	+,-,-	SRP9,ENAH,ENAH	123792,-687,-687
chr9:74676741-74677295	chr9	+	74676878	74677346	True	NM_004293,NM_001128618	chr9,chr9	+,-	GDA,C9orf57	86946,-1357
chr11:10300882-10301287	chr11	+	10301040	10301200	True	NM_030962,NM_001124	chr11,chr11	-,+	SBF2,ADM	14604,25441
chr5:169534530-169535192	chr5	+	169534650	169535182	True	NM_144769,NM_012188,NM_001129891	chr5,chr5,chr5	+,+,-	FOXI1,FOXI1,FAM196B	-1784,-1784,-126906
chr6:73967280-73967900	chr6	+	73967442	73967528	True	NM_001017361,NM_030568	chr6,chr6	+,-	C6orf221,KHDC1	104871,5439
chr6:8100782-8101284	chr6	+	8100904	8101166	True	NM_001135650,NR_027712,NR_037618,NM_004280	chr6,chr6,chr6,chr6	-,+,-,-	EEF1E1,PIP5K1P1,EEF1E1-MUTED,EEF1E1	1724,-114621,1724,1724
chr5:19924123-19925410	chr5	+	19924289	19925442	True	NM_001167667,NR_027027	chr5,chr5	-,+	CDH18,GUSBP1	62968,1534146
chr8:23081667-23082036	chr8	+	23081921	23081995	True	NR_033928,NM_003844	chr8,chr8	+,-	LOC389641,TNFRSF10A	738,735
chr19:4471348-4471594	chr19	+	4471391	4471594	True	NM_025241,NM_032631,NM_001001520	chr19,chr19,chr19	-,+,+	UBXN6,HDGFRP2,HDGFRP2	-13600,660,660
chr1:23860964-23862464	chr1	+	23861300	23862466	True	NM_004091,NR_027042	chr1,chr1	-,+	E2F2,MDS2	-3588,91357
chr2:3526575-3526839	chr2	+	3526609	3526865	True	NM_001011,NM_018269	chr2,chr2	+,-	RPS7,ADI1	95987,-3259
chr10:135193260-135193545	chr10	+	135193284	135193544	True	NM_207127,NR_037509,NM_004092,NM_152911,NM_207128	chr10,chr10,chr10,chr10,chr10	+,-,-,+,+	PAOX,MIR3944,ECHS1,PAOX,PAOX	-594,-8117,-6376,-594,-594
chr6:107075865-107076197	chr6	+	107075963	107076075	True	NM_032730,NM_018292	chr6,chr6	-,+	RTN4IP1,QRSL1	1348,1365
chr15:44482856-44483506	chr15	+	44483030	44483297	True	NM_032892,NM_138423	chr15,chr15	-,+	FRMD5,CASC4	4193,97611
chr1:25939829-25940928	chr1	+	25939846	25940927	True	NM_020379,NM_138618	chr1,chr1	+,-	MAN1C1,RHCE	3031,-192483
chr5:149681602-149681838	chr5	+	149681637	149681789	True	NM_001008657,NM_001012301	chr5,chr5	+,-	TCOF1,ARSI	55412,786
chr12:6992512-6993170	chr12	+	6992743	6993047	True	NM_032641,NR_033796,NR_002803	chr12,chr12,chr12	-,+,+	SPSB2,DSTNP2,RPL13P5	-10222,798,97
chr18:21577369-21578546	chr18	+	21577950	21578253	True	NM_153211,NM_018030	chr18,chr18	+,-	TTC39C,OSBPL1A	-5278,273996
chr1:94948257-94950178	chr1	+	94948348	94948817	True	NM_001178096,NM_002858	chr1,chr1	-,+	F3,ABCD3	58647,-64467
chr15:60765348-60767125	chr15	+	60766018	60767052	True	NM_012182,NM_001018089,NM_024611	chr15,chr15,chr15	+,-,-	FOXB1,NARG2,NARG2	-469661,4343,4343
chr3:88038016-88038425	chr3	+	88038016	88038454	True	NM_001008390,NM_000866	chr3,chr3	-,+	CGGBP1,HTR1F	69748,-6347
chr6:7399609-7400597	chr6	+	7399675	7400596	True	NM_205864,NM_031480,NM_001170692,NM_153005,NM_001170693	chr6,chr6,chr6,chr6,chr6	-,+,-,+,-	CAGE1,RIOK1,CAGE1,RIOK1,CAGE1	-9733,-9667,-9733,2283,-9733
chr14:105713235-105713560	chr14	+	105713246	105713600	True	NM_145685,NM_033271	chr14,chr14	-,+	BRF1,BTBD6	672,1278
chr9:125512491-125512823	chr9	+	125512515	125512813	True	NM_005388,NM_001004453	chr9,chr9	-,+	PDCL,OR1L6	78172,-440
chr1:161552979-161554675	chr1	+	161553129	161554457	True	NM_201563,NM_001127596	chr1,chr1	+,-	FCGR2C,FCGR3A	-2059,-32716
chr1:161552979-161554675	chr1	+	161635145	161636261	False	NM_004001,NM_001002273,NM_001190828,NM_001002274,NM_001002275,NR_002595	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-	FCGR2B,FCGR2B,FCGR2B,FCGR2B,FCGR2B,RPL31P11	-2293,-2293,-2293,-2293,-2293,18831
chr21:45435586-45436630	chr21	+	45435804	45436516	True	NR_026961,NM_003274	chr21,chr21	-,+	LOC284837,TRAPPC10	-203356,-3650
chr17:618534-618889	chr17	+	618533	618937	True	NM_018289,NM_024792,NM_001128159	chr17,chr17,chr17	-,+,-	VPS53,FAM57A,VPS53	-437,16909,-437
chr9:135285947-135286264	chr9	+	135286048	135286238	True	NM_007344,NM_207417	chr9,chr9	-,+	TTF1,C9orf171	-3827,-488
chr6:10753089-10753323	chr6	+	10753088	10753196	True	NM_030969,NR_026736,NM_001127711	chr6,chr6,chr6	+,-,+	TMEM14B,C6orf52,TMEM14B	-5144,-58058,-5144
chr8:37653379-37653946	chr8	+	37653475	37653995	True	NR_003671,NM_032777	chr8,chr8	-,+	LOC728024,GPR124	-47911,405
chr3:179280072-179280409	chr3	+	179280119	179280453	True	NM_177989,NM_020409,NM_004301,NM_178042	chr3,chr3,chr3,chr3	+,-,+,+	ACTL6A,MRPL47,ACTL6A,ACTL6A	254,42031,254,254
chr15:51902832-51904697	chr15	+	51903020	51904549	True	NM_001174116,NM_001165257	chr15,chr15	-,+	DMXL2,SCG3	10482,69000
chr2:20520876-20522225	chr2	+	20521111	20522083	True	NM_015317,NM_004040	chr2,chr2	-,+	PUM2,RHOB	5117,124751
chr15:76196310-76196551	chr15	+	76196329	76196411	True	NM_147188,NR_003136,NM_012170,NR_037623	chr15,chr15,chr15,chr15	+,-,+,+	FBXO22,FBXO22OS,FBXO22,FBXO22	-180,29110,-180,-180
chr10:64026094-64027987	chr10	+	64026120	64027938	True	NM_014951,NM_145307	chr10,chr10	+,-	ZNF365,RTKN2	105977,578
chr7:142960812-142961186	chr7	+	142960831	142961203	True	NM_001143680,NM_001143681,NM_001143679,NM_015917,NM_014690	chr7,chr7,chr7,chr7,chr7	+,+,+,+,-	GSTK1,GSTK1,GSTK1,GSTK1,FAM131B	-360,-360,-360,-360,98020
chr9:133711257-133711930	chr9	+	133711327	133711811	True	NM_005157,NM_198180	chr9,chr9	+,-	ABL1,QRFP	-547,57471
chr15:21005259-21005583	chr15	+	21005272	21005622	True	NR_027992,NR_027411	chr15,chr15	-,+	BCL8,GOLGA8C	-43792,-237649
chr15:21005259-21005583	chr15	+	22011955	22012029	False	NR_015416,NR_024387	chr15,chr15	+,-	LOC727924,CXADRP2	266002,4899
chr5:112042754-112043103	chr5	+	112042831	112043011	True	NM_001127511,NM_005669	chr5,chr5	+,-	APC,REEP5	190,215070
chr4:1006532-1006887	chr4	+	1006622	1006818	True	NM_001004358,NM_001004356,NM_021923,NM_213613	chr4,chr4,chr4,chr4	+,+,+,-	FGFRL1,FGFRL1,FGFRL1,SLC26A1	-913,-1063,-421,-19398
chr2:54280708-54282214	chr2	+	54280778	54281813	True	NM_014614,NM_138448	chr2,chr2	-,+	PSME4,ACYP2	-82801,60596
chr1:43300317-43300584	chr1	+	43300512	43300584	True	NM_018538,NM_199342	chr1,chr1	+,-	ERMAP,CCDC23	-9314,-17453
chr13:114102183-114102433	chr13	+	114102186	114102434	True	NM_017905,NM_138430,NM_199162	chr13,chr13,chr13	+,-,-	TMCO3,ADPRHL1,ADPRHL1	42873,5455,1073
chr3:131099323-131100128	chr3	+	131099327	131100175	True	NM_001171905,NR_033268,NM_001171906,NR_002985,NM_152395	chr3,chr3,chr3,chr3,chr3	+,+,+,-,+	NUDT16,NUDT16,NUDT16,SNORA58,NUDT16	339,449,433,97952,433
chr3:131099323-131100128	chr3	+	131079611	131079661	False	NR_002949,NR_002985,NR_027766	chr3,chr3,chr3	+,-,+	NUDT16P1,SNORA58,NUDT16P1	1027,118466,1056
chr15:25461941-25462499	chr15	+	25461981	25462519	True	NR_003315,NR_003358,NR_003495,NR_003496,NR_003497,NR_022010,NR_003344,NR_003345,NR_003351,NR_003314,NM_130838,NR_003342,NR_003343,NR_003303,NR_003346	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,+,-,+,+,+,+	SNORD115-23,SNORD115-43,SNORD115-24,HBII-52-27,HBII-52-28,PAR4,SNORD115-29,SNORD115-30,SNORD115-36,SNORD115-22,UBE3A,SNORD115-25,SNORD115-26,SNORD115-11,SNORD115-31	-5089,5873,-3226,3130,4981,-5193,5873,7830,5873,-6967,188184,-1344,1244,5873,9736
chr19:16680539-16680919	chr19	+	16680659	16680941	True	NM_024881,NM_032207	chr19,chr19	-,+	SLC35E1,C19orf44	2302,-73506
chr4:70893327-70893967	chr4	+	70893389	70894011	True	NM_000200,NM_001891	chr4,chr4	+,-	HTN3,CSN2	118,-66663
chr4:70893327-70893967	chr4	+	70915897	70915947	False	NM_001891,NM_002159	chr4,chr4	-,+	CSN2,HTN1	-89171,211
chr7:1545564-1545803	chr7	+	1545567	1545837	True	NM_002360,NM_001080453	chr7,chr7	+,-	MAFK,INTS1	24530,-1549
chr9:74980735-74980993	chr9	+	74980752	74981030	True	NM_138691,NM_001102420,NM_001102421,NM_006007	chr9,chr9,chr9,chr9	+,-,-,-	TMC1,ZFAND5,ZFAND5,ZFAND5	155686,-589,-589,-589
chr19:6463356-6463756	chr19	+	6463370	6463457	True	NM_139161,NM_174881,NM_024103	chr19,chr19,chr19	+,+,-	CRB3,CRB3,SLC25A23	802,802,-3589
chr1:161129968-161130591	chr1	+	161129980	161130492	True	NM_016406,NM_001122764,NM_012475,NM_000309,NM_001199873,NM_001014443	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,-,+	UFC1,PPOX,USP21,PPOX,B4GALT3,USP21	-6499,5688,-779,5688,17316,-779
chr10:18240314-18241507	chr10	+	18240321	18241105	True	NM_001145195,NM_014241,NM_152725	chr10,chr10,chr10	+,-,+	SLC39A12,PTPLA,SLC39A12	-17,-580948,-17
chr19:47337834-47339101	chr19	+	47337966	47339139	True	NR_024258,NM_004491	chr19,chr19	-,+	SNAR-E,GRLF1	-4005,82793
chr17:76226496-76227142	chr17	+	76226542	76227090	True	NR_002219,NM_001204210,NM_001204211,NM_001204212	chr17,chr17,chr17,chr17	-,+,+,+	EPR1,TMEM235,TMEM235,TMEM235	-5759,300,300,300
chr10:65280710-65280993	chr10	+	65280731	65280927	True	NM_032776,NM_001001330	chr10,chr10	-,+	JMJD1C,REEP3	-55009,195
chr16:84270965-84272396	chr16	+	84271186	84272114	True	NM_139174,NM_172347	chr16,chr16	+,-	ADAD2,KCNG4	-46514,1292
chr8:62554828-62555144	chr8	+	62554865	62555151	True	NM_173519,NM_001164750	chr8,chr8	+,-	CLVS1,ASPH	-354400,47307
chrX:138875134-138876927	chrX	+	138875254	138876881	True	NM_000133,NM_001010986	chrX,chrX	+,-	F9,ATP11C	-262410,37634
chr12:29426777-29427148	chr12	+	29426909	29426981	True	NM_018099,NM_016570	chr12,chr12	+,-	FAR2,ERGIC2	-50363,107218
chr10:103997822-103999631	chr10	+	103997985	103999671	True	NM_001199378,NM_001199379,NM_005029,NM_004193	chr10,chr10,chr10,chr10	+,+,-,+	GBF1,GBF1,PITX3,GBF1	5583,5583,1610,5583
chr12:110007499-110009322	chr12	+	110007559	110008910	True	NM_001114185,NM_000431,NM_052845	chr12,chr12,chr12	+,+,-	MVK,MVK,MMAB	2589,2589,2499
chr11:71846492-71848072	chr11	+	71847083	71847939	True	NM_014042,NM_000804	chr11,chr11	-,+	C11orf51,FOLR3	-23261,-363
chr22:31314769-31316110	chr22	+	31314768	31315991	True	NM_014941,NR_026920	chr22,chr22	-,+	MORC2,C22orf27	48246,2303
chr1:224023119-224024051	chr1	+	224023121	224024065	True	NM_001031685,NM_005426,NM_001748	chr1,chr1,chr1	-,-,+	TP53BP2,TP53BP2,CAPN2	9659,9659,-123060
chr2:175260874-175261244	chr2	+	175260896	175261248	True	NM_024583,NM_004882,NM_001193528	chr2,chr2,chr2	+,-,+	SCRN3,CIR1,SCRN3	-491,-453,-491
chr2:103033145-103034182	chr2	+	103033192	103034068	True	NM_003853,NM_032718	chr2,chr2	+,-	IL18RAP,MFSD9	1185,319319
chr1:109757477-109758418	chr1	+	109757477	109758221	True	NM_006513,NM_001005290,NR_034072	chr1,chr1,chr1	+,-,+	SARS,PSRC1,SARS	-1013,67621,-1013
chr16:89681229-89682103	chr16	+	89681245	89681585	True	NM_001083314,NM_001128141,NM_004413	chr16,chr16,chr16	-,+,+	CHMP1A,DPEP1,DPEP1	42594,-1580,5414
chr12:82792589-82793965	chr12	+	82792707	82793725	True	NM_032230,NR_033192	chr12,chr12	+,-	C12orf26,CCDC59	-40497,-40123
chr10:21785540-21785910	chr10	+	21785735	21785811	True	NM_001010911,NM_001195627,NR_031736	chr10,chr10,chr10	-,+,-	C10orf114,MLLT10,MIR1915	452,37289,-165
chr17:25401250-25402088	chr17	+	25401321	25402065	True	NM_015626,NM_000625	chr17,chr17	+,-	WSB1,NOS2	219040,725540
chr11:126079044-126079519	chr11	+	126079288	126079490	True	NM_001144827,NM_032795,NM_024556	chr11,chr11,chr11	-,-,+	RPUSD4,RPUSD4,FAM118B	2147,2147,2128
chr12:56547693-56549567	chr12	+	56547855	56549575	True	NM_021019,NM_002475,NM_079423,NM_001130420,NM_001199629	chr12,chr12,chr12,chr12,chr12	+,+,+,-,+	MYL6,MYL6B,MYL6,SMARCC2,MYL6B	2469,-1702,2469,33826,-1702
chr15:90930631-90931111	chr15	+	90930732	90931088	True	NR_028287,NM_003870	chr15,chr15	-,+	GABARAPL3,IQGAP1	-38053,384
chr19:10702008-10702320	chr19	+	10702179	10702345	True	NM_001145056,NM_005498	chr19,chr19	+,-	SLC44A2,AP1M2	10775,-4188
chr1:89451718-89452390	chr1	+	89451903	89452439	True	NM_019610,NM_001008662,NM_001008661,NM_001162536,NM_006256	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	RBMXL1,CCBL2,CCBL2,RBMXL1,PKN2	6265,6265,6265,6265,-302034
chr5:179498775-179498993	chr5	+	179498891	179498953	True	NM_003900,NM_018434	chr5,chr5	+,-	SQSTM1,RNF130	-251100,206
chr11:9113298-9113923	chr11	+	9113461	9113967	True	NM_020974,NR_027713,NM_001170690	chr11,chr11,chr11	-,+,-	SCUBE2,KRT8P41,SCUBE2	-311,1942,-311
chr22:50529264-50529574	chr22	+	50529401	50529499	True	NM_139202,NM_018995,NM_015166,NM_001164105,NM_001164104	chr22,chr22,chr22,chr22,chr22	-,+,-,+,+	MLC1,MOV10L1,MLC1,MOV10L1,MOV10L1	-5620,-1017,-5043,-767,-1017
chr11:129126378-129128274	chr11	+	129126455	129128272	True	NM_001142685,NM_003658	chr11,chr11	-,+	ARHGAP32,BARX2	-64362,117608
chrX:103429881-103430578	chrX	+	103429896	103430622	True	NM_001012755,NM_207318	chrX,chrX	-,+	MCART6,FAM199X	-28188,-18655
chr1:13361807-13362489	chr1	+	13362079	13362163	True	NM_001012276,NM_001010889,NM_001013407	chr1,chr1,chr1	-,+,+	PRAMEF8,PRAMEF6,PRAMEF5	28652,-2297,-2311
chr1:13361807-13362489	chr1	-	13005075	13005159	False	NM_001012277,NM_001010889	chr1,chr1	+,-	PRAMEF7,PRAMEF6	-27613,2297
chr1:13361807-13362489	chr1	-	13115407	13115491	False	NM_001100631,NM_001013407	chr1,chr1	+,-	PRAMEF22,PRAMEF5	-79915,2310
chr3:35695079-35696621	chr3	+	35695503	35696649	True	NM_033403,NM_016300	chr3,chr3	-,+	DCLK3,ARPP21	1084760,-11713
chr9:134359709-134360376	chr9	+	134359867	134360308	True	NR_003050,NR_002914,NM_001135954	chr9,chr9,chr9	+,+,-	SNORD62B,SNORD62A,UCK1	743,743,46405
chr17:73839713-73840059	chr17	+	73839759	73839925	True	NM_199242,NM_001080419	chr17,chr17	-,+	UNC13D,UNK	923,-59129
chr6:167735666-167736383	chr6	+	167735934	167736404	True	NM_004610,NM_031949	chr6,chr6	-,+	TCP10,TTLL2	61644,2169
chr1:53065062-53066126	chr1	+	53065075	53065843	True	NM_015696,NM_015269	chr1,chr1	+,-	GPX7,ZCCHC11	2199,-46313
chr17:6918485-6918910	chr17	+	6918488	6918862	True	NR_030178,NM_001142799,NM_001004333,NM_001142798,NM_174893,NR_037715,NR_037716,NR_037717,NR_029712,NM_181844	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,+,+,+,+,+,+,-,+	MIR497,C17orf49,RNASEK,C17orf49,C17orf49,RNASEK,RNASEK,RNASEK-C17ORF49,MIR195,BCL6B	2529,-483,-2803,-483,-483,-2803,-2803,-2803,2208,7506
chr9:140084542-140085026	chr9	+	140084791	140084857	True	NM_003731,NM_013366	chr9,chr9	+,-	SSNA1,ANAPC2	-1795,-1734
chr13:37573502-37574139	chr13	+	37573691	37574139	True	NM_001142364,NM_013338,NM_181503	chr13,chr13,chr13	-,-,+	ALG5,ALG5,EXOSC8	-187,-187,538
chr1:203147134-203148506	chr1	+	203147136	203148373	True	NM_001276,NM_004997,NM_001048230	chr1,chr1,chr1	-,-,+	CHI3L1,MYBPH,ADORA1	7600,-2194,-50353
chr17:56408064-56408434	chr17	+	56408087	56408373	True	NM_024418,NM_004758,NR_027647,NR_029683	chr17,chr17,chr17,chr17	-,-,+,-	BZRAP1,BZRAP1,LPO,MIR142	-1935,-1935,-92351,356
chrX:133117122-133118647	chrX	+	133117353	133118689	True	NM_001164617,NM_001101357,NM_004484,NM_001164619,NM_001164618	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	GPC3,CCDC160,GPC3,GPC3,GPC3	1034,252387,1034,1034,1034
chr21:42205984-42206187	chr21	+	42205983	42206100	True	NM_001389,NR_036167	chr21,chr21	-,+	DSCAM,MIR3197	12994,333383
chr4:3464700-3464961	chr4	+	3464699	3465009	True	NM_001164673,NM_002337,NM_173660	chr4,chr4,chr4	+,-,+	DOK7,LRPAP1,DOK7	23,69265,23
chr1:51566814-51567205	chr1	+	51566881	51566978	True	NM_001136508,NM_007051	chr1,chr1	+,-	C1orf185,FAF1	927,-140945
chr19:42892503-42893272	chr19	+	42892850	42893122	True	NM_032488,NM_001410	chr19,chr19	-,+	CNFN,MEGF8	1372,-63140
chr11:63607471-63608550	chr11	+	63607556	63608420	True	NM_001039469,NM_001163296,NM_004954,NM_001144936,NM_001163297	chr11,chr11,chr11,chr11,chr11	+,+,+,-,+	MARK2,MARK2,MARK2,C11orf95,MARK2	-1207,-1207,-1207,-71443,-1207
chr8:72757501-72758205	chr8	+	72757588	72758110	True	NR_033652,NR_033651,NM_005098	chr8,chr8,chr8	+,+,-	LOC100132891,LOC100132891,MSC	-2287,-1294,-857
chr21:30563150-30564517	chr21	+	30563218	30564104	True	NM_006585,NR_027072	chr21,chr21	-,+	CCT8,NCRNA00189	-117208,1696
chr2:3382224-3382454	chr2	+	3382237	3382455	True	NM_016030,NM_003310	chr2,chr2	+,-	TTC15,TSSC1	990,-584
chr15:81285739-81286895	chr15	+	81285853	81286587	True	NM_022566,NM_015154	chr15,chr15	+,-	MESDC1,MESDC2	6707,-3648
chr5:76012203-76012750	chr5	+	76012313	76012747	True	NR_028375,NM_001992,NM_004101	chr5,chr5,chr5	+,+,-	NCRUPAR,F2R,F2RL2	-4601,-496,-93073
chrX:30871376-30872085	chrX	+	30871416	30872137	True	NM_203391,NM_152787	chrX,chrX	+,-	GK,TAB3	-200001,35431
chr11:62010361-62010861	chr11	+	62010558	62010910	True	NM_206998,NM_006551	chr11,chr11	-,+	SCGB1D4,SCGB1D2	55676,-892
chr19:6502484-6502788	chr19	+	6502713	6502775	True	NM_003811,NM_006087	chr19,chr19	+,-	TNFSF9,TUBB4	28234,-383
chr3:51989558-51989794	chr3	+	51989588	51989830	True	NM_033010,NM_080865	chr3,chr3	-,+	PCBP4,GPR62	7128,-309
chr5:86564575-86565073	chr5	+	86564597	86565107	True	NM_001199189,NM_002890,NM_022650	chr5,chr5,chr5	-,+,+	CCNH,RASA1,RASA1	143664,-497,-6
chr6:20534746-20536318	chr6	+	20534763	20535982	True	NM_017774,NM_001080480	chr6,chr6	+,-	CDKAL1,MBOAT1	-126,-322093
chr3:45730179-45730622	chr3	+	45730243	45730651	True	NM_014016,NR_033947	chr3,chr3	+,-	SACM1L,LOC644714	102,-63
chr4:47916867-47917285	chr4	+	47916896	47917114	True	NM_152995,NM_207330	chr4,chr4	-,+	NFXL1,NIPAL1	-263,101676
chr1:151345246-151346120	chr1	+	151345279	151346116	True	NM_002796,NM_003944	chr1,chr1	+,-	PSMB4,SELENBP1	25924,-115
chr12:49719045-49719633	chr12	+	49719169	49719552	True	NM_001100620,NM_001008223,NM_005480	chr12,chr12,chr12	+,-,+	TROAP,C1QL4,TROAP	-2256,11469,-2256
chr6:51904379-51905195	chr6	+	51904415	51905221	True	NR_029713,NM_138694	chr6,chr6	+,-	MIR206,PKHD1	103925,47252
chr7:66134277-66134791	chr7	+	66134504	66134724	True	NM_153033,NR_002933	chr7,chr7	+,-	KCTD7,LOC493754	-40696,-91006
chr1:149903510-149904557	chr1	+	149903822	149904255	True	NM_181873,NM_005850,NM_016074,NM_001145862	chr1,chr1,chr1,chr1	-,-,+,-	MTMR11,SF3B4,BOLA1,MTMR11	4068,-3678,-32720,4593
chr6:88412165-88412878	chr6	+	88412256	88412789	True	NM_018064,NM_001197259,NR_002767	chr6,chr6,chr6	-,+,-	AKIRIN2,ORC3,AKIRIN2-AS1	-271,-112522,-1323
chr1:224050461-224052005	chr1	+	224050460	224051935	True	NM_005426,NM_001748	chr1,chr1	-,+	TP53BP2,CAPN2	-16786,-150407
chr11:102221304-102222935	chr11	+	102221386	102222801	True	NM_001166,NM_052932	chr11,chr11	+,-	BIRC2,TMEM123	-3472,101027
chr12:113495072-113495328	chr12	+	113495219	113495375	True	NM_004416,NM_001193521	chr12,chr12	+,-	DTX1,RASAL1	286,78234
chr1:26701341-26702123	chr1	+	26701425	26702095	True	NM_001114759,NM_024674,NM_173574	chr1,chr1,chr1	-,+,-	ZNF683,LIN28A,ZNF683	-2159,35173,-2159
chr8:23022190-23022686	chr8	+	23022228	23022638	True	NM_003840,NR_033928	chr8,chr8	-,+	TNFRSF10D,LOC389641	-688,60095
chr20:37555307-37555648	chr20	+	37555337	37555575	True	NM_030919,NR_027124	chr20,chr20	+,-	FAM83D,LOC339568	-433,297866
chr8:97506703-97507230	chr8	+	97506826	97507183	True	NM_015942,NM_002998	chr8,chr8	-,+	MTERFD1,SDC2	-233030,-995
chr11:18813093-18813358	chr11	+	18813143	18813371	True	NM_153347,NM_001039970,NM_032781,NM_006906	chr11,chr11,chr11,chr11	+,-,-,-	TMEM86A,PTPN5,PTPN5,PTPN5	-92843,68,68,68
chr19:17620507-17621284	chr19	+	17620720	17621049	True	NM_012088,NM_138454	chr19,chr19	+,-	PGLS,NXNL1	1382,-48995
chr17:76225278-76225762	chr17	+	76225297	76225684	True	NR_002219,NM_001204210,NM_001204211,NM_001204212	chr17,chr17,chr17,chr17	-,+,+,+	EPR1,TMEM235,TMEM235,TMEM235	-4514,1706,1706,1706
chr8:100041806-100042602	chr8	+	100042064	100042647	True	NM_152564,NM_006281	chr8,chr8	+,-	VPS13B,STK3	-16626,-204155
chr15:100271571-100272051	chr15	+	100271646	100271963	True	NM_001130928,NM_152449	chr15,chr15	+,-	MEF2A,LYSMD4	-98521,1713
chr11:65792965-65793666	chr11	+	65793038	65793686	True	NM_001323,NM_053054	chr11,chr11	+,-	CST6,CATSPER1	-13627,352
chr7:129695854-129696574	chr7	+	129696174	129696467	True	NM_016478,NM_014997	chr7,chr7	-,+	ZC3HC1,KLHDC10	-4941,13881
chr2:96991325-96991672	chr2	+	96991358	96991627	True	NM_015341,NM_001163523,NM_001163524,NM_178495,NM_001008949,NM_014014	chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,+,-	NCAPH,ITPRIPL1,ITPRIPL1,ITPRIPL1,ITPRIPL1,SNRNP200	9856,-340,317,307,-347,-20051
chr12:48360475-48361076	chr12	+	48360538	48361102	True	NM_001143841,NM_001844,NM_001143843,NM_001143842,NM_024056	chr12,chr12,chr12,chr12,chr12	+,-,+,+,+	TMEM106C,COL2A1,TMEM106C,TMEM106C,TMEM106C	-3259,37233,-3259,-3259,-3259
chr6:42532277-42532683	chr6	+	42532311	42532733	True	NM_015255,NM_001184801,NM_033502	chr6,chr6,chr6	+,+,-	UBR2,UBR2,TRERF1	-602,-602,-112528
chr7:99212203-99214158	chr7	+	99212228	99213752	True	NM_145111,NM_145115,NM_000777	chr7,chr7,chr7	-,+,-	FAM200A,ZNF498,CYP3A5	-62471,818,63919
chr9:19033363-19034015	chr9	+	19033395	19034035	True	NM_153707,NM_006570	chr9,chr9	-,+	FAM154A,RRAGA	-139,15336
chr19:58862152-58862403	chr19	+	58862168	58862444	True	NM_130786,NR_015380	chr19,chr19	-,+	A1BG,A1BG-AS1	2471,891
chr1:32480281-32480493	chr1	+	32480335	32480535	True	NM_080391,NM_006559	chr1,chr1	-,+	PTP4A2,KHDRBS1	-76347,-895
chr10:11204142-11205031	chr10	+	11204323	11205076	True	NM_001083591,NR_024411,NM_001025076	chr10,chr10,chr10	+,-,+	CELF2,LOC254312,CELF2	1916,-210197,1916
chr5:112039079-112039598	chr5	+	112039335	112039649	True	NM_001127511,NM_005669	chr5,chr5	+,-	APC,REEP5	3552,218434
chr4:37688545-37689672	chr4	+	37688864	37689663	True	NM_001085400,NM_018302,NM_001085399	chr4,chr4,chr4	-,+,-	RELL1,C4orf19,RELL1	-865,-103060,-865
chr17:73898185-73898893	chr17	+	73898192	73898808	True	NM_173547,NM_001113324,NM_032478	chr17,chr17,chr17	-,+,-	TRIM65,C17orf106,MRPL38	-5138,76489,2425
chr16:70287067-70287432	chr16	+	70287076	70287366	True	NM_058219,NM_001014449	chr16,chr16	-,+	EXOSC6,DDX19B	-1243,45705
chr9:79011612-79011917	chr9	+	79011622	79011700	True	NR_026890,NM_018339	chr9,chr9	+,-	RPSAP9,RFK	1814,-2178
chr5:41446212-41446863	chr5	+	41446352	41446749	True	NM_175921,NM_001005473	chr5,chr5	+,-	C5orf51,PLCXD3	457720,64034
chr14:104312566-104313231	chr14	+	104312654	104313226	True	NM_153046,NM_015316	chr14,chr14	+,-	TDRD9,PPP1R13B	81590,751
chr20:25777686-25778441	chr20	+	25777918	25778428	True	NR_004846,NR_027061,NR_026714	chr20,chr20,chr20	+,-,-	LOC100134868,FAM182B,FAM182B	212006,-1040,3549
chr20:25777686-25778441	chr20	-	26038748	26039258	False	NR_003678,NR_026713	chr20,chr20	-,+	C20orf191,FAM182A	55469,-3549
chr17:75316930-75317763	chr17	+	75317011	75317811	True	NM_006640,NR_036200	chr17,chr17	+,-	SEPT9,MIR4316	-1465,75375
chr8:117773673-117774792	chr8	+	117773891	117774828	True	NM_003756,NM_032334	chr8,chr8	-,+	EIF3H,UTP23	-5829,3913
chr9:35036502-35036789	chr9	+	35036628	35036756	True	NM_001040410,NM_001040411,NM_001040412,NM_007126,NM_203299	chr9,chr9,chr9,chr9,chr9	+,+,+,-,+	C9orf131,C9orf131,C9orf131,VCP,C9orf131	5466,4345,4345,36033,5466
chr9:111775977-111776310	chr9	+	111776025	111776359	True	NM_003798,NM_017832	chr9,chr9	-,+	CTNNAL1,C9orf6	-261,-79403
chr5:178421208-178421422	chr5	+	178421289	178421356	True	NM_001136116,NM_000843	chr5,chr5	+,-	ZNF879,GRM6	29419,821
chr20:31871017-31871801	chr20	+	31871078	31871760	True	NM_033197,NM_016082	chr20,chr20	+,-	C20orf114,CDK5RAP1	-188,117627
chr1:40507842-40508106	chr1	+	40507848	40508138	True	NM_006367,NM_000310,NM_001105530	chr1,chr1,chr1	+,-,+	CAP1,PPT1,CAP1	-1652,55054,-1652
chr14:101358113-101359041	chr14	+	101358383	101359039	True	NR_029696,NR_030173,NR_029699,NR_024149,NM_001134888	chr14,chr14,chr14,chr14,chr14	+,+,+,+,-	MIR127,MIR432,MIR136,MEG8,RTL1	-9118,-7614,-7395,2067,-7199
chr5:141029473-141030181	chr5	+	141029572	141030138	True	NM_033449,NM_173828	chr5,chr5	-,+	FCHSD1,RELL2	898,-13119
chr6:165444337-165446023	chr6	+	165444616	165446060	True	NM_144980,NR_027284	chr6,chr6	-,+	C6orf118,LOC441177	277101,954978
chr7:112124977-112126551	chr7	+	112125161	112126286	True	NM_182597,NM_014705,NM_001134468	chr7,chr7,chr7	+,-,+	C7orf53,DOCK4,C7orf53	-4153,-278699,-4311
chr9:84561131-84561392	chr9	+	84561178	84561412	True	NM_005077,NM_207416	chr9,chr9	-,+	TLE1,FAM75D3	-257582,-2814
chr9:84561131-84561392	chr9	+	84546086	84546320	False	NM_001145197,NM_005077	chr9,chr9	+,-	FAM75D4,TLE1	-2794,-242490
chr2:20793255-20793621	chr2	+	20793341	20793643	True	NM_022460,NM_182828	chr2,chr2	-,+	HS1BP3,GDF7	57271,72780
chrX:32286364-32287751	chrX	+	32286364	32287789	True	NM_203391,NM_004023	chrX,chrX	+,-	GK,DMD	-1614941,-112778
chr1:24967734-24967977	chr1	+	24967824	24968006	True	NM_005839,NM_001199012	chr1,chr1	+,-	SRRM1,C1orf201	1587,-226237
chr2:46739439-46741091	chr2	+	46739686	46741123	True	NM_080653,NM_012249	chr2,chr2	-,+	ATP6V1E2,RHOQ	6028,28743
chr1:206996822-206998016	chr1	+	206996908	206997908	True	NM_013371,NM_000572	chr1,chr1	+,-	IL19,IL10	4313,-51069
chr2:71562073-71563220	chr2	+	71562072	71563050	True	NM_020459,NM_001014972,NM_014497	chr2,chr2,chr2	-,+,+	PAIP2B,ZNF638,ZNF638	-107839,-3234,-3234
chr19:9695395-9695891	chr19	+	9695615	9695716	True	NM_001008727,NM_001172651	chr19,chr19	-,+	ZNF121,ZNF177	-406,-208687
chr16:57568926-57569945	chr16	+	57569013	57569755	True	NM_153837,NM_033212	chr16,chr16	+,-	GPR114,CCDC102A	6845,772
chr2:112891761-112892247	chr2	+	112891815	112892064	True	NM_001128165,NM_032494,NM_153214	chr2,chr2,chr2	+,-,+	FBLN7,ZC3H8,FBLN7	3897,120651,3897
chr12:49960549-49961392	chr12	+	49960577	49961360	True	NM_006337,NM_012284,NM_001012300	chr12,chr12,chr12	-,+,-	MCRS1,KCNH3,MCRS1	601,-27688,-355
chr17:4544896-4545698	chr17	+	4544929	4545640	True	NM_001140,NM_001114974	chr17,chr17	-,+	ALOX15,SMTNL2	31,-57146
chr20:36889439-36890822	chr20	+	36889492	36890848	True	NM_001029864,NM_001725	chr20,chr20	-,+	KIAA1755,BPI	-318,41703
chr4:78783988-78784914	chr4	+	78784159	78784515	True	NM_020236,NM_144571	chr4,chr4	+,-	MRPL1,CNOT6L	-410,-43615
chr1:32755452-32756512	chr1	+	32755496	32756440	True	NM_023009,NM_004964	chr1,chr1	-,+	MARCKSL1,HDAC1	45444,1267
chr4:3954783-3956446	chr4	+	3954930	3956482	True	NM_000683,NR_024253	chr4,chr4	+,-	ADRA2C,LOC348926	-186688,716
chr20:5091217-5091547	chr20	+	5091226	5091568	True	NM_001009923,NM_182649,NM_001009925,NM_001009924,NR_028370,NM_014145	chr20,chr20,chr20,chr20,chr20,chr20	-,-,-,-,+,-	C20orf30,PCNA,C20orf30,C20orf30,PCNA-AS1,C20orf30	2222,9136,2222,2222,8663,2222
chr20:44542686-44543213	chr20	+	44543024	44543263	True	NM_006227,NM_182676,NM_022104	chr20,chr20,chr20	-,-,+	PLTP,PLTP,PCIF1	-2238,-2238,20053
chr10:122609156-122610776	chr10	+	122610131	122610819	True	NM_018117,NR_033850	chr10,chr10	+,-	WDR11,LOC283089	-35,20
chr17:33909115-33909522	chr17	+	33909298	33909430	True	NR_003037,NM_001282,NM_001030006,NM_000286	chr17,chr17,chr17,chr17	+,+,+,-	SNORD7,AP2B1,AP2B1,PEX12	-8673,4851,4851,-3642
chr1:14694817-14695461	chr1	+	14694836	14695493	True	NM_015209,NR_027136	chr1,chr1	+,-	KAZN,C1orf126	229719,783518
chr9:86573137-86573603	chr9	+	86573283	86573591	True	NM_024945,NM_032307	chr9,chr9	+,-	RMI1,C9orf64	22045,-1620
chr7:32993503-32994888	chr7	+	32994281	32994724	True	NM_007270,NR_003500	chr7,chr7	+,-	FKBP9,RP9P	2280,-11499
chr7:32993503-32994888	chr7	-	55795547	55795826	False	NM_182633,NR_003949	chr7,chr7	+,-	ZNF713,FKBP9L	184504,-23287
chr8:66546360-66546650	chr8	+	66546447	66546688	True	NM_018120,NM_001145839	chr8,chr8	-,+	ARMC1,MTFR1	5,10199
chr2:86427159-86428082	chr2	+	86427171	86428130	True	NM_006839,NM_016622,NM_001100170,NM_145644,NM_001100169	chr2,chr2,chr2,chr2,chr2	-,+,-,+,-	IMMT,MRPL35,IMMT,MRPL35,IMMT	-4278,-674,-4278,-674,-4278
chr22:25435906-25436863	chr22	+	25435957	25436711	True	NM_001001663,NM_001145206	chr22,chr22	-,+	TMEM211,KIAA1671	-100643,-12067
chr1:226255365-226256838	chr1	+	226255551	226256530	True	NM_152608,NM_002107,NR_002315	chr1,chr1,chr1	-,+,+	C1orf55,H3F3A,LOC440926	-68485,-5195,-5175
chr20:30460336-30460664	chr20	+	30460562	30460712	True	NM_001012644,NM_177991,NM_001008409,NM_080611	chr20,chr20,chr20,chr20	-,-,+,-	DUSP15,DUSP15,TTLL9,DUSP15	-2761,-2551,-2108,-2083
chr5:1635338-1636678	chr5	+	1635426	1636676	True	NR_003713,NM_004553	chr5,chr5	-,+	LOC728613,NDUFS6	-1306,164819
chr5:1635338-1636678	chr5	-	266588	266654	False	NM_145265,NM_013232	chr5,chr5	-,+	CCDC127,PDCD6	-48291,5081
chr19:13108665-13109320	chr19	+	13108671	13109329	True	NM_002501,NM_052850	chr19,chr19	+,-	NFIX,GADD45GIP1	-2138,-40621
chr2:31457516-31457719	chr2	+	31457562	31457694	True	NM_014600,NM_001145122	chr2,chr2	+,-	EHD3,CAPN14	-733,-17151
chr20:43284824-43285361	chr20	+	43284992	43285396	True	NM_003881,NM_000022	chr20,chr20	+,-	WISP2,ADA	58488,-4616
chr17:65821441-65821664	chr17	+	65821440	65821672	True	NM_004459,NM_182641,NM_181655	chr17,chr17,chr17	+,+,-	BPTF,BPTF,C17orf58	107,107,168143
chr7:107382706-107383656	chr7	+	107382927	107383623	True	NM_000111,NM_024814,NR_024199	chr7,chr7,chr7	-,+,+	SLC26A3,CBLL1,CBLL1	60105,655,655
chr7:141488902-141489908	chr7	+	141488973	141489899	True	NR_015392,NM_018980,NM_001008270	chr7,chr7,chr7	-,+,-	FLJ40852,TAS2R5,PRSS37	-50943,117,51372
chr10:33226406-33227523	chr10	+	33226814	33227525	True	NM_024688,NM_033668	chr10,chr10	+,-	C10orf68,ITGB1	-370214,-2328
chr16:70559718-70560358	chr16	+	70559920	70560404	True	NM_012426,NM_015386,NR_003696,NR_037420,NM_001195139	chr16,chr16,chr16,chr16,chr16	+,-,+,+,-	SF3B3,COG4,SNORD111B,MIR3647,COG4	-2281,-2463,3000,2997,-2463
chr1:46860279-46860702	chr1	+	46860320	46860534	True	NM_001441,NM_006369	chr1,chr1	+,-	FAAH,LRRC41	-433,-91282
chr3:120027710-120028552	chr3	+	120027823	120028598	True	NM_001099678,NM_001168331	chr3,chr3	-,+	LRRC58,NDUFB4	39638,286529
chr4:110222331-110223088	chr4	+	110222600	110223014	True	NM_032518,NM_198721,NM_001042734	chr4,chr4,chr4	-,-,+	COL25A1,COL25A1,SEC24B	835,835,131956
chr22:21319012-21319218	chr22	+	21319033	21319243	True	NM_001018060,NM_001008695,NR_027464,NM_001146288,NM_144704	chr22,chr22,chr22,chr22,chr22	+,-,+,+,+	AIFM3,THAP7,AIFM3,AIFM3,AIFM3	174,37211,2203,2203,174
chr1:55503991-55504788	chr1	+	55504212	55504768	True	NM_014762,NM_174936	chr1,chr1	-,+	DHCR24,PCSK9	-151291,380
chr5:176322371-176323086	chr5	+	176322474	176323066	True	NM_133369,NM_002115	chr5,chr5	+,-	UNC5A,HK3	-84966,3317
chr11:118961617-118962139	chr11	+	118961715	118962177	True	NM_002105,NM_001024382,NM_000190	chr11,chr11,chr11	-,+,+	H2AFX,HMBS,HMBS	4050,-3075,-6185
chr13:51683939-51684182	chr13	+	51683944	51684224	True	NR_003923,NM_145019	chr13,chr13	-,+	GUCY1B2,FAM124A	-43651,112282
chr1:207274595-207275732	chr1	+	207275193	207275766	True	NM_018566,NM_000715	chr1,chr1	-,+	YOD1,C4BPA	-50771,1840
chr3:16646184-16646408	chr3	+	16646187	16646450	True	NM_001144382,NM_001351,NM_001190811	chr3,chr3,chr3	+,-,-	PLCL2,DAZL,DAZL	280001,606,-83
chrX:37551947-37553257	chrX	+	37551974	37553169	True	NM_021083,NM_006520	chrX,chrX	+,-	XK,DYNLT3	-6893,153777
chr1:23346621-23346897	chr1	+	23346621	23346855	True	NM_001142546,NM_015013,NM_001009999	chr1,chr1,chr1	-,+,+	LUZP1,KDM1A,KDM1A	148546,-731,-731
chr5:6714897-6715120	chr5	+	6714904	6715032	True	NM_001171805,NR_037947,NM_006999	chr5,chr5,chr5	+,-,+	PAPD7,NSUN2,PAPD7	-237,-81431,-237
chr22:20012062-20012652	chr22	+	20012222	20012510	True	NM_152906,NR_029706,NM_001670	chr22,chr22,chr22	+,+,-	C22orf25,MIR185,ARVCF	-3642,8151,-7913
chr8:145058502-145058728	chr8	+	145058517	145058765	True	NM_000837,NM_032789,NM_001009184,NM_000445	chr8,chr8,chr8,chr8	+,-,+,-	GRINA,PARP10,GRINA,PLEC	5460,1920,5460,-7604
chr2:38980101-38980592	chr2	+	38980259	38980325	True	NM_001031684,NM_001195446,NM_024775	chr2,chr2,chr2	-,-,+	SRSF7,SRSF7,GEMIN6	-1623,-1623,25001
chr3:13979799-13981561	chr3	+	13980411	13981460	True	NR_036481,NM_004625,NR_002223	chr3,chr3,chr3	+,-,+	LOC100132526,WNT7A,TPRXL	-5916,-58793,-1662
chr1:22110791-22111203	chr1	+	22111011	22111199	True	NM_001032730,NM_001013693,NM_032236	chr1,chr1,chr1	-,+,-	USP48,LDLRAD2,USP48	-1323,27558,-1323
chr2:202647563-202649411	chr2	+	202647716	202649404	True	NM_001135745,NM_139158,NM_020919	chr2,chr2,chr2	-,+,-	ALS2,CDK15,ALS2	-1821,21793,-1821
chr12:107712555-107712843	chr12	+	107712557	107712829	True	NM_001018072,NM_004075	chr12,chr12	+,-	BTBD11,CRY1	-411,-224959
chr4:116034322-116034959	chr4	+	116034404	116034980	True	NM_022569,NR_030303	chr4,chr4	-,+	NDST4,MIR577	102,-456551
chr3:52490548-52491024	chr3	+	52490658	52491072	True	NM_003280,NM_007184	chr3,chr3	-,+	TNNC1,NISCH	-2601,-1185
chr5:1526428-1526955	chr5	+	1526627	1526945	True	NM_024830,NM_004553	chr5,chr5	-,+	LPCAT1,NDUFS6	-2551,274550
chr20:60641797-60643127	chr20	+	60641984	60642872	True	NM_144703,NM_003185	chr20,chr20	+,-	LSM14B,TAF4	54644,-1118
chr5:112094459-112095145	chr5	+	112094589	112095018	True	NM_001127510,NM_005669	chr5,chr5	+,-	APC,REEP5	-21092,163076
chr3:136706839-136707614	chr3	+	136707079	136707658	True	NM_144717,NM_005862	chr3,chr3	+,-	IL20RB,STAG1	-30423,-235834
chr12:131648422-131648847	chr12	+	131648435	131648881	True	NR_026670,NM_194356	chr12,chr12	+,-	LOC116437,STX2	674,-324624
chrY:23759771-23760257	chrY	+	23759851	23760273	True	NM_001006120,NR_001537	chrY,chrY	+,-	RBMY1D,TTTY13	-63097,-3299
chr16:198373-199412	chr16	+	198512	199366	True	NM_001039476,NM_001077350,NM_005332	chr16,chr16,chr16	-,-,+	NPRL3,NPRL3,HBZ	-9902,-9840,3487
chr6:161582270-161583384	chr6	+	161582375	161583381	True	NM_006724,NR_024277	chr6,chr6	+,-	MAP3K4,NCRNA00241	-169604,-121
chr11:47739600-47740057	chr11	+	47739662	47740103	True	NM_024783,NM_001164379	chr11,chr11	-,+	AGBL2,FAM180B	-3360,-131490
chr15:86682733-86683180	chr15	+	86682831	86683123	True	NM_022480,NM_152336	chr15,chr15	-,+	KLHL25,AGBL1	-344642,2118
chr14:106438407-106440123	chr14	+	106438542	106439870	True	NR_026800	chr14	+	KIAA0125	-54755
chrX:41306446-41307192	chrX	+	41306464	41307188	True	NM_022567,NM_001126054	chrX,chrX	+,-	NYX,CASK	-94,475149
chr17:2241531-2242243	chr17	+	2241661	2242014	True	NR_003072,NR_003073,NM_014853,NM_018128,NM_001098509	chr17,chr17,chr17,chr17,chr17	-,-,+,-,+	SNORD91A,SNORD91B,SGSM2,TSR1,SGSM2	-7997,-9157,-906,-983,-904
chr19:50638363-50638843	chr19	+	50638529	50638599	True	NR_024223,NR_024224,NR_024243,NR_024226,NR_024227,NR_024228,NR_024229,NM_001145809,NR_024215,NR_024214,NR_024231,NR_024230,NR_024242,NR_024225	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,+,-,-,-,-,-,-	SNAR-A5,SNAR-A7,SNAR-D,SNAR-A9,SNAR-A6,SNAR-A8,SNAR-A10,MYH14,SNAR-A4,SNAR-A3,SNAR-B1,SNAR-B2,SNAR-A14,SNAR-A11	-6750,-6750,5034,-6750,-6750,-6750,-6750,68285,-6750,-6750,-1408,-1408,-6750,-6750
chr8:124732425-124734015	chr8	+	124732508	124734044	True	NM_144963,NM_001003954	chr8,chr8	+,-	FAM91A1,ANXA13	46837,15653
chr8:67783211-67784057	chr8	+	67783235	67783775	True	NR_002598,NM_173518,NM_001136160,NM_001136161	chr8,chr8,chr8,chr8	-,+,+,+	SNORD87,C8orf45,C8orf45,C8orf45	51059,-302,-39,-302
chr2:25566274-25566483	chr2	+	25566279	25566439	True	NM_014971,NM_175630,NM_175629,NM_022552	chr2,chr2,chr2,chr2	+,-,-,-	EFR3B,DNMT3A,DNMT3A,DNMT3A	-301357,-820,-820,-1505
chr3:194030975-194031694	chr3	+	194031070	194031678	True	NR_033929,NR_024480	chr3,chr3	+,-	FLJ34208,LOC100131551	176190,-477
chr22:31518328-31518539	chr22	+	31518411	31518525	True	NM_080430,NM_001002837	chr22,chr22	-,+	SELM,INPP5J	-14860,435
chr15:56024989-56025261	chr15	+	56025021	56025089	True	NM_173814,NM_001198784	chr15,chr15	-,+	PRTG,FLJ27352	10142,-324356
chr9:67680056-67680922	chr9	+	67680195	67680928	True	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	113311,245832
chr9:67680056-67680922	chr9	+	46271281	46271331	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2640551,416234
chr9:67680056-67680922	chr9	+	44758965	44759015	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	231220,-1128235
chr9:67680056-67680922	chr9	-	45111986	45112036	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-121801,-1481256
chr16:68272140-68273142	chr16	+	68272602	68273006	True	NM_024939,NM_012320	chr16,chr16	-,+	ESRP2,PLA2G15	-2466,6240
chr7:21259897-21261074	chr7	+	21259980	21261064	True	NM_198956,NM_003112	chr7,chr7	-,+	SP8,SP4	-433472,206624
chr12:56234592-56236557	chr12	+	56234760	56236306	True	NR_036479,NM_002429	chr12,chr12	+,-	LOC440104,MMP19	-11419,479
chr10:81652222-81652467	chr10	+	81652222	81652503	True	NR_033857,NM_003019	chr10,chr10	+,-	LOC100288974,SFTPD	12150,56409
chr19:32835238-32835783	chr19	+	32835584	32835832	True	NM_014910,NM_001136156,NM_032139	chr19,chr19,chr19	+,+,-	ZNF507,ZNF507,ANKRD27	681,681,330320
chrX:30636159-30636869	chrX	+	30636382	30636776	True	NM_000167,NM_025159	chrX,chrX	+,-	GK,CXorf21	34699,-40349
chr19:45393947-45394259	chr19	+	45394012	45394288	True	NM_145288,NM_006114,NM_001128916,NM_001128917	chr19,chr19,chr19,chr19	-,+,+,+	ZNF296,TOMM40,TOMM40,TOMM40	185450,188,188,188
chr1:187451084-187452627	chr1	+	187451095	187452243	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-801536,-653114
chr1:226962525-226962807	chr1	+	226962530	226962632	True	NM_002221,NM_000447	chr1,chr1	-,+	ITPKB,PSEN2	-35654,95640
chr10:75758826-75759030	chr10	+	75758861	75759025	True	NM_003373,NM_001001791,NM_014000	chr10,chr10,chr10	+,-,+	VCL,C10orf55,VCL	-1040,-76326,-1040
chr6:37231653-37233171	chr6	+	37232004	37233193	True	NM_001162900,NM_017772,NM_145316	chr6,chr6,chr6	-,+,-	TMEM217,TBC1D22B,TMEM217	-6073,-6508,-6591
chr6:36560884-36561180	chr6	+	36560991	36561061	True	NM_003017,NR_037491,NR_036610	chr6,chr6,chr6	+,-,+	SRSF3,MIR3925,SRSF3	1028,29284,1028
chr11:71167536-71167763	chr11	+	71167607	71167762	True	NM_018161,NM_001360,NM_001163817	chr11,chr11,chr11	+,-,-	NADSYN1,DHCR7,DHCR7	-3441,-8130,-8130
chr2:27069184-27069406	chr2	+	27069184	27069370	True	NM_020134,NM_001029881	chr2,chr2	+,-	DPYSL5,CIB4	1598,-204973
chr2:177052606-177052973	chr2	+	177052650	177052917	True	NM_024501,NR_033979	chr2,chr2	+,-	HOXD1,LOC401022	389,819
chr16:58327269-58327502	chr16	+	58327392	58327530	True	NM_014157,NM_001080492	chr16,chr16	+,-	CCDC113,PRSS54	-43603,1471
chr3:141464977-141466124	chr3	+	141465135	141466157	True	NM_001201370,NM_183237,NR_037703,NR_037702,NM_001178140,NM_014245	chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,-,+	RNF7,RNF7,RNF7,RNF7,TFDP2,RNF7	-8143,-8143,-8143,-8143,253128,-8143
chr10:134146483-134147642	chr10	+	134146487	134147544	True	NR_026559,NM_030626,NM_173575,NM_001143757,NM_001143759,NM_001143758	chr10,chr10,chr10,chr10,chr10,chr10	+,+,-,+,+,+	LRRC27,LRRC27,STK32C,LRRC27,LRRC27,LRRC27	3066,-924,-25010,-797,-924,-924
chr7:29535641-29536705	chr7	+	29535883	29536743	True	NM_001039936,NR_024278	chr7,chr7	+,-	CHN2,LOC646762	-16451,188061
chr15:50715896-50716108	chr15	+	50716094	50716154	True	NM_005154,NM_181427,NM_001128611,NM_001128610	chr15,chr15,chr15,chr15	+,-,+,+	USP8,GABPB1,USP8,USP8	424,-68489,424,424
chr6:99874646-99875974	chr6	+	99875105	99875728	True	NM_032870,NM_015491,NM_001195131	chr6,chr6,chr6	-,-,+	SFRS18,SFRS18,LOC100130890	-1898,-1898,93141
chr3:4539286-4540760	chr3	+	4539960	4540734	True	NM_001099952,NM_001168272,NM_002222,NM_182760	chr3,chr3,chr3,chr3	+,+,+,-	ITPR1,ITPR1,ITPR1,SUMF1	-4979,-4979,-4979,-30994
chr1:45267040-45267316	chr1	+	45267291	45267365	True	NM_001013632,NM_004073,NM_001136537	chr1,chr1,chr1	-,+,+	TCTEX1D4,PLK3,BTBD19	5642,-1306,6788
chr19:6592484-6592913	chr19	+	6592521	6592779	True	NM_001252,NM_003811	chr19,chr19	-,+	CD70,TNFSF9	-1358,-61562
chr15:41520987-41521395	chr15	+	41521116	41521384	True	NM_007236,NM_152596	chr15,chr15	+,-	CHP,EXD1	2052,1571
chr14:101362179-101363190	chr14	+	101362440	101363122	True	NR_024149,NM_001134888	chr14,chr14	+,-	MEG8,RTL1	-1394,-11256
chrX:55516537-55517174	chrX	+	55516903	55517211	True	NM_014061,NM_201286	chrX,chrX	+,-	MAGEH1,USP51	-38416,-1272
chr17:38473409-38474299	chr17	+	38473657	38474343	True	NM_000964,NM_001145301,NM_001145302,NM_152219	chr17,chr17,chr17,chr17	+,+,+,-	RARA,RARA,RARA,GJD3	-8285,129,129,46652
chr6:14768431-14769377	chr6	+	14768667	14769115	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	477411,894230
chr12:64797667-64797978	chr12	+	64797779	64797931	True	NM_001170633,NM_007235	chr12,chr12	-,+	C12orf56,XPOT	-13434,221
chr6:27212579-27213281	chr6	+	27212819	27213196	True	NM_005865,NM_033482	chr6,chr6	+,-	PRSS16,POM121L2	2305,66867
chr21:22173846-22175051	chr21	+	22174006	22175042	True	NM_004540,NR_024090	chr21,chr21	+,-	NCAM2,C21orf131	195590,434
chr6:76452779-76454615	chr6	+	76453660	76454632	True	NM_015687,NM_004999	chr6,chr6	-,+	FILIP1,MYO6	-250164,4276
chr1:236432254-236432657	chr1	+	236432604	236432708	True	NM_145861,NM_019891	chr1,chr1	+,-	EDARADD,ERO1LB	124971,12685
chr12:66553990-66554581	chr12	+	66554002	66554417	True	NM_016056,NM_001142523	chr12,chr12	-,+	TMBIM4,IRAK3	9451,28560
chr8:42947739-42947940	chr8	+	42947781	42947917	True	NR_027669,NM_032237	chr8,chr8	-,+	RNF170,SGK196	-195915,739
chr3:44803496-44804834	chr3	+	44803515	44804694	True	NM_020242,NM_020696	chr3,chr3	+,-	KIF15,KIAA1143	-357,-342
chr3:120317058-120318511	chr3	+	120317246	120318538	True	NM_004547,NM_001168331,NM_000187	chr3,chr3,chr3	+,+,-	NDUFB4,NDUFB4,HGD	-2170,-2170,82932
chr10:46763868-46764989	chr10	+	46764113	46764968	True	NR_027632,NR_026566,NR_003611	chr10,chr10,chr10	+,-,-	FAM35B,BMS1P1,BMS1P5	132672,-1221,-1221
chr10:46763868-46764989	chr10	+	47245058	47245733	False	NR_027634,NR_024495	chr10,chr10	+,-	FAM35B2,LOC642826	133986,-1564
chr10:46763868-46764989	chr10	-	48183623	48184298	False	NM_002900,NR_024495	chr10,chr10	-,+	RBP3,LOC642826	206744,1557
chr10:46763868-46764989	chr10	+	48954030	48954705	False	NR_026566,NM_153034,NR_003611	chr10,chr10,chr10	-,+,-	BMS1P1,ZNF488,BMS1P5	-1401,-598993,-1401
chr13:50700186-50700431	chr13	+	50700332	50700480	True	NR_002612,NR_002605	chr13,chr13	-,+	DLEU2,DLEU1	-655,-43969
chr7:76105541-76106292	chr7	+	76105565	76106273	True	NR_003262,NM_001102596	chr7,chr7	-,+	FDPSL2A,DTX2	-1248,3553
chr7:76105541-76106292	chr7	+	76603664	76603990	False	NR_023383,NM_006682	chr7,chr7	+,-	PMS2P11,FGL2	6148,225210
chr7:123173167-123174483	chr7	+	123173314	123174414	True	NM_080928,NM_178827	chr7,chr7	+,-	ASB15,IQUB	74697,354
chr11:19145971-19146386	chr11	+	19146088	19146426	True	NM_054030,NM_019028,NM_001001483	chr11,chr11,chr11	-,+,+	MRGPRX2,ZDHHC13,ZDHHC13	-63860,-7455,-7455
chr17:72322646-72322995	chr17	+	72322672	72322844	True	NM_153209,NM_001080466	chr17,chr17	+,-	KIF19,BTBD17	-372,35164
chr13:19758331-19759640	chr13	+	19758762	19759551	True	NM_006001,NR_034026	chr13,chr13	-,+	TUBA3C,LOC100287114	-2770,159637
chr3:47326596-47326837	chr3	+	47326650	47326891	True	NM_022342,NM_182902,NM_001134878,NM_025010	chr3,chr3,chr3,chr3	-,-,-,+	KIF9,KIF9,KIF9,KLHL18	-2313,-2313,-2313,-2371
chr8:143850410-143850697	chr8	+	143850461	143850745	True	NM_177477,NM_177476,NM_177457,NM_177458,NM_016647,NM_023946	chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,+,-	LYNX1,LYNX1,LYNX1,LYNX1,C8orf55,LYNX1	8049,7742,8945,551,-41891,8944
chr17:65362762-65363404	chr17	+	65362845	65363354	True	NM_002816,NM_012417,NM_174871	chr17,chr17,chr17	-,+,-	PSMD12,PITPNC1,PSMD12	-124,10569,-124
chr22:48886941-48887521	chr22	+	48887084	48887540	True	NR_033377,NM_001082967	chr22,chr22	-,+	FLJ46257,FAM19A5	-859766,-1847
chr16:14726037-14726515	chr16	+	14726140	14726559	True	NM_016561,NM_002582,NM_001134477	chr16,chr16,chr16	+,-,-	BFAR,PARN,PARN	108,-2016,-2020
chr19:20842920-20843253	chr19	+	20843097	20843188	True	NM_001076675,NR_034060,NM_145297	chr19,chr19,chr19	-,+,-	ZNF626,ZNF85,ZNF626	1271,262870,1271
chr7:87487779-87488485	chr7	+	87487941	87488339	True	NM_006716,NM_018843	chr7,chr7	+,-	DBF4,SLC25A40	17204,17414
chr12:56325868-56326097	chr12	+	56325867	56326069	True	NM_001345,NM_032345,NM_001143853,NM_201554,NM_201444,NM_201445	chr12,chr12,chr12,chr12,chr12,chr12	+,-,-,+,+,+	DGKA,WIBG,WIBG,DGKA,DGKA,DGKA	-972,-4170,-4958,-106,-106,-106
chr7:127230680-127231378	chr7	+	127230689	127231353	True	NM_024523,NM_020369,NM_001662	chr7,chr7,chr7	-,+,+	GCC1,FSCN3,ARF5	-5035,2335,-2341
chr16:75571676-75572593	chr16	+	75571694	75572547	True	NM_024533,NM_007285	chr16,chr16	-,+	CHST5,GABARAPL2	-2626,27701
chr3:122919553-122920638	chr3	+	122919771	122920561	True	NM_012430,NM_001031702	chr3,chr3	+,-	SEC22A,SEMA5B	212,-173195
chr6:53012520-53013977	chr6	+	53012791	53013997	True	NM_012347,NM_003643	chr6,chr6	+,-	FBXO9,GCM1	-77071,-37
chr21:45529448-45529811	chr21	+	45529513	45529791	True	NM_005049,NM_015259	chr21,chr21	+,-	PWP2,ICOSLG	-2356,131093
chr20:18120081-18120340	chr20	+	18120172	18120284	True	NR_028402,NM_020536,NM_001164811,NM_021220	chr20,chr20,chr20,chr20	+,+,+,-	CSRP2BP,CSRP2BP,PET117,OVOL2	5458,2583,-1728,-81651
chr19:53141810-53142632	chr19	+	53141900	53142360	True	NM_001105551,NM_001105550,NM_001105553,NM_001105552,NM_001105554,NM_018300,NR_023311,NM_001105549	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,+,-	ZNF83,ZNF83,ZNF83,ZNF83,ZNF83,ZNF83,ZNF137P,ZNF83	-256,-256,-256,-256,-256,-256,-42014,-256
chrX:54525147-54526381	chrX	+	54525291	54526067	True	NM_004463,NM_001184819	chrX,chrX	-,+	FGD1,GNL3L	-2692,30576
chr20:23340499-23342160	chr20	+	23341382	23342130	True	NM_022482,NM_022080	chr20,chr20	+,-	GZF1,NAPB	2890,60076
chr16:56714016-56715428	chr16	+	56714107	56715426	True	NM_005952,NM_005950,NR_003669	chr16,chr16,chr16	+,-,+	MT1X,MT1G,MT1IP	955,-12130,-4522
chr7:99002550-99002811	chr7	+	99002573	99002811	True	NM_003910,NM_014891	chr7,chr7	+,-	BUD31,PDAP1	3789,3544
chr19:24269198-24269973	chr19	+	24269566	24269982	True	NM_203282,NR_003603	chr19,chr19	+,-	ZNF254,LOC100101266	-7,76317
chr9:2621125-2621387	chr9	+	2621172	2621422	True	NR_015375,NM_003383,NM_001018056	chr9,chr9,chr9	-,+,+	FLJ35024,VLDLR,VLDLR	1001,370,370
chr16:30034111-30034336	chr16	+	30034113	30034355	True	NM_031478,NM_001109660,NM_001109659	chr16,chr16,chr16	-,+,+	FAM57B,C16orf92,C16orf92	7881,299,299
chr15:72526058-72527929	chr15	+	72526219	72527823	True	NM_182471,NM_182470,NM_002654,NM_145204	chr15,chr15,chr15,chr15	-,-,-,+	PKM2,PKM2,PKM2,SENP8	-2535,-2535,-2535,-115647
chr16:67450460-67450726	chr16	+	67450512	67450752	True	NM_013304,NM_000196	chr16,chr16	-,+	ZDHHC1,HSD11B2	-173,14283
chr16:66915147-66916630	chr16	+	66915230	66916582	True	NM_020786,NM_001204744	chr16,chr16	+,-	PDP2,CDH16	-898,36355
chr12:10958917-10959719	chr12	+	10958987	10959740	True	NM_023918,NM_023919,NM_023917,NM_005042	chr12,chr12,chr12,chr12	-,-,-,+	TAS2R8,TAS2R7,TAS2R9,PRH2	-32,-3761,3078,122093
chr10:135267633-135268124	chr10	+	135267637	135267877	True	NR_002934,NM_001012508	chr10,chr10	+,-	LOC619207,SPRN	-256,-29516
chr9:45727825-45728031	chr9	+	45727848	45727990	True	NM_001145196,NR_024060	chr9,chr9	-,+	FAM75A6,FAM27A	-2097118,-870
chr9:45727825-45728031	chr9	+	44991057	44991199	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-872,-1360327
chr9:45727825-45728031	chr9	-	67793221	67793363	False	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	876,133397
chr5:88426577-88427273	chr5	+	88426581	88427295	True	NM_001193347,NM_006467	chr5,chr5	-,+	MEF2C,POLR3G	-226659,1343385
chr17:48132706-48133076	chr17	+	48132711	48133065	True	NM_005220,NM_002204,NM_005501	chr17,chr17,chr17	-,+,+	DLX3,ITGA3,ITGA3	-60123,274,274
chr21:43615164-43615594	chr21	+	43615213	43615639	True	NR_027243,NM_207627,NM_207628	chr21,chr21,chr21	-,+,+	C21orf128,ABCG1,ABCG1	-86569,4159,4282
chr20:43347344-43348635	chr20	+	43347355	43348365	True	NR_034104,NM_003881	chr20,chr20	-,+	LOC79015,WISP2	-46975,-3521
chr16:28943549-28943872	chr16	+	28943553	28943699	True	NM_024816,NM_001770,NM_001178098	chr16,chr16,chr16	-,+,+	RABEP2,CD19,CD19	-7021,-344,-344
chr7:38696061-38696263	chr7	+	38696129	38696225	True	NM_139316,NM_001166018	chr7,chr7	-,+	AMPH,POU6F2	-24962,321383
chr15:90218438-90218809	chr15	+	90218441	90218724	True	NM_001145311,NM_020212,NM_002666	chr15,chr15,chr15	-,+,-	PLIN1,WDR93,PLIN1	3974,15303,3974
chr6:5007509-5008248	chr6	+	5007717	5008061	True	NM_001145115,NM_006638	chr6,chr6	+,-	PPP1R3G,RPP40	77658,-3446
chr1:155107764-155108140	chr1	+	155107769	155108015	True	NM_004428,NM_018973,NM_153741,NM_018845,NM_001122839,NM_001122837,NM_182685	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,+,+,+,+	EFNA1,DPM3,DPM3,SLC50A1,SLC50A1,SLC50A1,EFNA1	-7471,4918,5031,272,272,272,-7471
chrX:53074858-53076437	chrX	+	53075083	53075629	True	NM_018969,NM_014138	chrX,chrX	+,-	GPR173,FAM156A	2876,-88907
chr17:34191164-34192054	chr17	+	34191256	34191938	True	NM_152781,NM_003487	chr17,chr17	-,+	C17orf66,TAF15	4007,-54819
chr8:17431871-17433317	chr8	+	17432026	17433330	True	NM_020749,NM_006207	chr8,chr8	-,+	MTUS1,PDGFRL	121966,611
chr6:155587153-155588267	chr6	+	155587499	155588059	True	NM_001001346,NM_016020	chr6,chr6	+,-	CLDN20,TFB1M	-2404,47609
chr17:39621991-39622249	chr17	+	39622027	39622291	True	NM_030975,NM_002278	chr17,chr17	+,-	KRTAP9-9,KRT32	-210442,1397
chr6:157801334-157801561	chr6	+	157801496	157801574	True	NM_018452,NM_153746,NM_024630	chr6,chr6,chr6	-,+,+	C6orf35,ZDHHC14,ZDHHC14	-56243,982,982
chr1:16847540-16847806	chr1	+	16847651	16847829	True	NR_023386,NR_037446	chr1,chr1	-,+	CROCCP3,MIR3675	-28455,27579
chr9:95435270-95435856	chr9	+	95435581	95435865	True	NM_022755,NR_036505	chr9,chr9	-,+	IPPK,LOC100128361	-3034,-55309
chr17:34304072-34304816	chr17	+	34304391	34304727	True	NM_004590,NM_032963,NM_032962,NM_002988	chr17,chr17,chr17,chr17	-,-,-,+	CCL16,CCL14,CCL14,CCL18	3846,9087,9087,86915
chr19:7893424-7893703	chr19	+	7893425	7893527	True	NM_145245,NM_001190467	chr19,chr19	+,-	EVI5L,FLJ22184	1633,45849
chr22:30900823-30901247	chr22	+	30901135	30901241	True	NM_001161368,NM_174977,NM_016498	chr22,chr22,chr22	-,-,+	SEC14L4,SEC14L4,MTFP1	507,507,-79582
chr3:57584430-57586045	chr3	+	57584547	57585763	True	NM_001660,NM_177966	chr3,chr3	-,+	ARF4,PDE12	-1332,-42628
chr8:144661517-144661898	chr8	+	144661525	144661923	True	NM_145201,NM_001100878,NM_032862	chr8,chr8,chr8	-,-,+	NAPRT1,C8orf73,TIGD5	-1012,-6597,18150
chr1:184702005-184703525	chr1	+	184702004	184703209	True	NM_025191,NM_007212	chr1,chr1	-,+	EDEM3,RNF2	20889,311341
chr7:4814514-4815044	chr7	+	4814532	4814966	True	NM_020144,NM_014855	chr7,chr7	-,+	PAPOLB,KIAA0415	86709,295
chrX:23016907-23017822	chrX	+	23017069	23017799	True	NM_182699,NM_001033583	chrX,chrX	+,-	DDX53,ACOT9	287,743658
chr19:57857823-57859176	chr19	+	57858068	57858672	True	NM_020633,NM_020657	chr19,chr19	-,+	VN1R1,ZNF304	109487,3972
chr16:67905962-67906917	chr16	+	67906059	67906825	True	NM_014329,NM_025082	chr16,chr16	+,-	EDC4,CENPT	173,-24698
chr19:1887158-1887858	chr19	+	1887264	1887674	True	NM_079834,NM_001130111,NM_031213	chr19,chr19,chr19	+,-,-	SCAMP4,FAM108A1,FAM108A1	17698,-1746,-1746
chr19:39896138-39896711	chr19	+	39896170	39896555	True	NM_019088,NM_003407,NM_022835	chr19,chr19,chr19	-,+,+	PAF1,ZFP36,PLEKHG2	-14491,931,7194
chr17:57286372-57286999	chr17	+	57286637	57286716	True	NM_182620,NM_018149	chr17,chr17	-,+	SKA2,C17orf71	-53837,654
chr1:230786335-230787933	chr1	+	230786827	230787923	True	NM_001145036,NM_007357,NM_000029	chr1,chr1,chr1	+,+,-	COG2,COG2,AGT	-8689,-8689,62463
chr16:56688176-56688867	chr16	+	56688180	56688654	True	NM_005947,NM_005949,NM_005950	chr16,chr16,chr16	+,+,-	MT1B,MT1F,MT1G	-2420,3200,13373
chr7:117119235-117119565	chr7	+	117119285	117119547	True	NR_023315,NM_000492	chr7,chr7	-,+	ASZ1,CFTR	-51708,469
chr16:835344-835646	chr16	+	835347	835623	True	NM_001025190,NM_058192,NM_022092	chr16,chr16,chr16	-,-,+	MSLNL,RPUSD1,CHTF18	-2421,2810,2998
chr1:1370136-1370824	chr1	+	1370272	1370626	True	NM_199121,NR_026871,NM_001146685,NM_022834	chr1,chr1,chr1,chr1	+,-,+,+	VWA1,LOC441869,TMEM88B,VWA1	276,-13622,-8815,276
chr5:140103615-140105520	chr5	+	140103753	140105429	True	NR_026705,NR_026704,NM_002109	chr5,chr5,chr5	+,+,-	VTRNA1-3,VTRNA1-2,HARS	314,-5293,-32782
chr17:44365666-44367537	chr17_ctg5_hap1	-	498540	499171	False	NM_001193465,NM_014834	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	KIAA1267,LRRC37A	64326,-39936
chr17:44365666-44367537	chr17_ctg5_hap1	-	1384265	1384318	False	NR_002940,NM_016632	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LRRC37A4,ARL17A	97058,129619
chr17:44365666-44367537	chr17_ctg5_hap1	-	1245250	1245339	False	NR_026901,NR_037772	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LOC644172,CRHR1	-56867,-74797
chr17:44365666-44367537	chr17_ctg5_hap1	+	1229044	1230007	False	NR_026901,NR_037772	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LOC644172,CRHR1	-40656,-58591
chr17:44365666-44367537	chr17	+	44366470	44367433	True	NM_001193465,NM_014834	chr17,chr17	-,+	KIAA1267,LRRC37A	-63730,5063
chr16:3767915-3768591	chr16	+	3767939	3768295	True	NM_005223,NM_016292	chr16,chr16	+,-	DNASE1,TRAP1	-65051,-341
chr14:33404562-33405862	chr14	+	33404725	33405901	True	NM_001164749,NM_001165893,NR_027263,NM_173159,NM_022123	chr14,chr14,chr14,chr14,chr14	+,+,-,+,+	NPAS3,NPAS3,C14orf128,NPAS3,NPAS3	2557,2557,-858820,2557,2557
chr16:9058503-9058755	chr16	+	9058685	9058759	True	NM_003470,NM_014117	chr16,chr16	-,+	USP7,C16orf72	-1344,126777
chrX:13420062-13420407	chrX	+	13420066	13420413	True	NM_001167890,NM_001135995	chrX,chrX	+,-	EGFL6,ATXN3L	167280,-81548
chr7:23057926-23059413	chr7	+	23058129	23059286	True	NM_001172428,NM_032581	chr7,chr7	+,-	KLHL7,FAM126A	86066,-4359
chr2:48674048-48674702	chr2	+	48674357	48674721	True	NM_152994,NM_000233,NM_001193475,NM_001135629,NR_024188	chr2,chr2,chr2,chr2,chr2	+,-,+,+,+	KLRAQ1,LHCGR,KLRAQ1,KLRAQ1,KLRAQ1	-6501,308209,-6501,-6501,-6501
chr7:100025176-100026013	chr7	+	100025340	100026030	True	NM_001194992,NM_001194991,NM_001194990,NM_019606,NM_017984,NM_145030	chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,-,-	MEPCE,MEPCE,MEPCE,MEPCE,ZCWPW1,C7orf47	382,382,382,1223,322,8114
chr7:150725315-150725574	chr7	+	150725428	150725620	True	NM_173681,NM_007188	chr7,chr7	-,+	ATG9B,ABCB8	-3842,10
chr4:57358117-57359886	chr4	+	57358392	57359762	True	NM_002703,NM_206919	chr4,chr4	-,+	PPAT,ARL9	-56590,11612
chr19:53446972-53447527	chr19	+	53447260	53447447	True	NM_152473,NR_037805	chr19,chr19	+,-	HERV-V1,ZNF321	69896,-1413
chr4:148410926-148412248	chr4	+	148411148	148412208	True	NM_138364,NR_028596,NM_001957,NM_001166055	chr4,chr4,chr4,chr4	-,+,+,+	PRMT10,EDNRA,EDNRA,EDNRA	193122,-9131,-9131,-9131
chr5:55777397-55777804	chr5	+	55777451	55777805	True	NM_024669,NM_005921	chr5,chr5	-,+	ANKRD55,MAP3K1	-248265,333094
chr5:154317860-154318162	chr5	+	154317974	154318158	True	NM_001014990,NM_015465,NM_014180	chr5,chr5,chr5	+,-,+	MRPL22,GEMIN5,MRPL22	2474,-198,2474
chr1:33780232-33780654	chr1	+	33780285	33780532	True	NR_037400,NM_152493	chr1,chr1	-,+	MIR3605,ZNF362	17620,-58162
chr2:23646617-23648315	chr2	+	23646977	23648307	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	501677,-38730
chr17:79605024-79605447	chr17	+	79605126	79605276	True	NM_017921,NM_031945	chr17,chr17	-,+	NPLOC4,TSPAN10	-988,4072
chr1:113248858-113249397	chr1	+	113248869	113249235	True	NM_001042678,NM_001042679,NM_005167,NM_001004440,NM_175744	chr1,chr1,chr1,chr1,chr1	-,-,-,+,-	RHOC,RHOC,PPM1J,FAM19A3,RHOC	840,493,8765,13953,840
chr4:53521122-53522874	chr4	+	53521148	53522894	True	NM_022832,NR_024031,NM_001134223	chr4,chr4,chr4	-,+,-	USP46,KIAA0114,USP46	2662,55726,-81
chr5:43602859-43603290	chr5	+	43602950	43603184	True	NM_182977,NM_012343,NM_183323	chr5,chr5,chr5	+,+,-	NNT,NNT,PAIP1	44,-210,-45429
chr8:101573282-101574473	chr8	+	101573689	101574487	True	NM_198401,NM_003114	chr8,chr8	-,+	ANKRD46,SPAG1	-1677,-403190
chrX:71461520-71461924	chrX	+	71461708	71461928	True	NM_001170747,NM_017669	chrX,chrX	+,-	PIN4,ERCC6L	-60233,-2850
chr9:139978923-139980406	chr9	+	139978967	139980309	True	NM_207309,NM_016219,NR_027447	chr9,chr9,chr9	+,+,-	UAP1L1,MAN1B1,LOC100289341	-7065,1107,1010
chr9:111619883-111621233	chr9	+	111620066	111621268	True	NM_006687,NM_006686	chr9,chr9	+,-	ACTL7A,ACTL7B	3334,-1791
chr9:34648709-34649497	chr9	+	34648746	34649534	True	NM_000155,NM_001142784,NM_004512,NM_147162,NM_005866	chr9,chr9,chr9,chr9,chr9	+,+,+,+,-	GALT,IL11RA,IL11RA,IL11RA,SIGMAR1	-2162,2647,4397,4397,-10978
chr14:102555023-102555416	chr14	+	102555062	102555234	True	NM_181302,NM_005348	chr14,chr14	+,-	WDR20,HSP90AA1	50977,-1550
chr19:22883895-22884703	chr19	+	22884129	22884216	True	NM_020855,NM_001080409	chr19,chr19	+,-	ZNF492,ZNF99	-67055,68627
chr4:71595426-71596506	chr4	+	71595519	71596525	True	NM_144646,NM_014961,NM_001037442	chr4,chr4,chr4	-,+,+	IGJ,RUFY3,RUFY3	-63171,-7880,-7880
chr2:103376380-103377164	chr2	+	103376380	103376915	True	NM_144632,NM_032718	chr2,chr2	+,-	TMEM182,MFSD9	1574,-23043
chr1:7831801-7832065	chr1	+	7831907	7832029	True	NM_006786,NM_004781	chr1,chr1	-,+	UTS2,VAMP3	81125,-629
chr9:98081093-98082703	chr9	+	98081469	98082752	True	NM_000136,NR_029496	chr9,chr9	-,+	FANCC,MIR24-1	-1478,-233226
chr15:23086150-23086361	chr15	+	23086230	23086312	True	NM_001142275,NM_144599,NM_001033028	chr15,chr15,chr15	-,-,+	NIPA1,NIPA1,CYFIP1	581,174,-130526
chr3:98450307-98451031	chr3	+	98450347	98450975	True	NM_006100,NM_000097	chr3,chr3	+,-	ST3GAL6,CPOX	596,-137892
chr19:13214120-13214410	chr19	+	13214184	13214400	True	NM_005583,NM_052876	chr19,chr19	-,+	LYL1,NACC1	-210,14708
chr19:18452053-18453732	chr19	+	18452387	18453737	True	NM_017712,NM_012321	chr19,chr19	+,-	PGPEP1,LSM4	-1030,-18386
chr1:20400095-20401159	chr1	+	20400413	20401022	True	NM_000929,NM_012400	chr1,chr1	+,-	PLA2G5,PLA2G2D	-3763,45037
chr3:48131295-48132067	chr3	+	48131429	48131908	True	NM_004345,NM_001134364,NM_002375,NM_030885	chr3,chr3,chr3,chr3	+,-,-,-	CAMP,MAP4,MAP4,MAP4	132953,-660,-660,-660
chr20:31868036-31868892	chr20	+	31868103	31868859	True	NM_033197,NM_016082	chr20,chr20	+,-	C20orf114,CDK5RAP1	2081,120528
chr2:102975167-102976814	chr2	+	102975190	102976497	True	NM_003855,NM_032718	chr2,chr2	+,-	IL18R1,MFSD9	2599,376890
chr12:75724192-75724723	chr12	+	75724192	75724568	True	NM_032606,NM_152779	chr12,chr12	-,+	CAPS2,GLIPR1L1	-356,3894
chr17:20370405-20370903	chr17	+	20370489	20370851	True	NM_001190790,NM_001042685	chr17,chr17	+,-	CDRT15L2,LGALS9B	112185,47
chr17:20370405-20370903	chr17	+	20602127	20602251	False	NM_001190790,NR_029393	chr17,chr17	+,-	CDRT15L2,KRT16P3	-119141,-194316
chr19:10654190-10654496	chr19	+	10654190	10654328	True	NM_023008,NR_031603,NM_032885	chr19,chr19,chr19	-,+,+	KRI1,MIR1238,ATG4D	22424,8469,318
chr3:132440444-132440778	chr3	+	132440444	132440744	True	NR_002811,NR_037804,NM_153240	chr3,chr3,chr3	+,-,-	NCRNA00119,NPHP3-ACAD11,NPHP3	441,609,609
chr20:22558325-22558680	chr20	+	22558364	22558642	True	NM_021784,NM_153675,NR_001558,NM_001052	chr20,chr20,chr20,chr20	-,-,-,+	FOXA2,FOXA2,NCRNA00261,SSTR4	6509,7509,688,457414
chr12:112204933-112205488	chr12	+	112205225	112205534	True	NR_015404,NM_001204889,NM_000690	chr12,chr12,chr12	-,+,+	C12orf47,ALDH2,ALDH2	75222,-585,-585
chr7:34862741-34863403	chr7	+	34863155	34863409	True	NR_015356,NM_207173	chr7,chr7	-,+	AAA1,NPSR1	10590,-165315
chr2:128453727-128453959	chr2	+	128453808	128453992	True	NM_032740,NM_001161404	chr2,chr2	+,-	SFT2D3,LIMS2	4604,-14448
chr7:141693834-141695830	chr7	+	141694294	141695664	True	NM_004668,NM_176817	chr7,chr7	+,-	MGAM,TAS2R38	14,-20721
chr8:145841374-145843257	chr8	+	145841429	145843059	True	NM_014665,NM_025251	chr8,chr8	+,-	LRRC14,ARHGAP39	-98117,-2541
chr1:228743458-228743719	chr1	+	228743483	228743605	True	NR_037962,NM_033445	chr1,chr1	+,-	RHOU,HIST3H2A	36788,-97923
chr14:36982903-36983593	chr14	+	36983115	36983585	True	NM_003317,NM_006194,NM_001101341,NM_001079668	chr14,chr14,chr14,chr14	-,+,-,-	NKX2-1,PAX9,SFTA3,NKX2-1	5368,143187,-125,5895
chr3:112281829-112283044	chr3	+	112281986	112282816	True	NM_022488,NM_017945	chr3,chr3	-,+	ATG3,SLC35A5	-1501,-1142
chr14:24520181-24520920	chr14	+	24520486	24520906	True	NM_138360,NM_006177	chr14,chr14	+,-	LRRC16B,NRL	299,32976
chr1:201370092-201370473	chr1	+	201370186	201370462	True	NM_005558,NM_001005337	chr1,chr1	-,+	LAD1,PKP1	-1517,-117657
chrX:38421264-38421501	chrX	+	38421266	38421504	True	NM_001034853,NM_004615	chrX,chrX	-,+	RPGR,TSPAN7	-234478,-586
chr3:158781098-158782785	chr3	+	158781287	158782817	True	NM_002888,NM_001042706,NM_001042705,NM_001197100,NM_001197113,NM_001197114	chr3,chr3,chr3,chr3,chr3,chr3	-,+,+,+,+,+	RARRES1,IQCJ,IQCJ,IQCJ,IQCJ-SCHIP1,IQCJ-SCHIP1	-331012,4223,4223,4223,4223,4223
chr8:57305534-57306878	chr8	+	57305725	57306888	True	NM_006211,NM_024300	chr8,chr8	-,+	PENK,CHCHD7	51756,-181461
chr16:27560329-27560883	chr16	+	27560529	27560609	True	NM_015202,NM_001520	chr16,chr16	+,-	KIAA0556,GTF3C1	858,692
chr17:38277175-38277782	chr17	+	38277271	38277637	True	NM_001012241,NM_021724	chr17,chr17	+,-	MSL1,NR1D1	1152,-20298
chr5:112871942-112872954	chr5	+	112872309	112872999	True	NM_022828,NM_001085377	chr5,chr5	+,-	YTHDC2,MCC	-22978,-47782
chr15:99190248-99190585	chr15	+	99190256	99190592	True	NM_182562,NM_000875	chr15,chr15	-,+	FAM169B,IGF1R	-132645,2168
chr7:17373669-17375302	chr7	+	17373695	17375318	True	NM_001621,NM_176813	chr7,chr7	+,-	AHR,AGR3	-35477,-452082
chr2:229418336-229418772	chr2	+	229418560	229418781	True	NM_178821,NM_030623	chr2,chr2	+,-	WDR69,SPHKAP	-682285,-372199
chr11:72853998-72855482	chr11	+	72854041	72855160	True	NM_014824,NM_002564	chr11,chr11	-,+	FCHSD2,P2RY2	-898,74183
chr16:34602388-34602868	chr16	+	34602393	34602885	True	NR_027080,NR_026980,NR_027079	chr16,chr16,chr16	+,-,+	LOC283914,LOC146481,LOC283914	-4665,112132,-4550
chr1:202897466-202898048	chr1	+	202897550	202897943	True	NR_002929,NM_021633	chr1,chr1	+,-	LOC148709,KLHL12	-66727,-1179
chr3:49450992-49451688	chr3	+	49451080	49451286	True	NR_028435,NM_022171,NM_000481,NM_001164712,NM_001664,NM_001164710,NM_001164711	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-,-	AMT,TCTA,AMT,AMT,RHOA,AMT,AMT	8875,-1492,8875,8875,-1554,8875,8875
chr11:71639077-71639410	chr11	+	71639167	71639459	True	NR_024147,NR_029192,NR_024148,NM_018320	chr11,chr11,chr11,chr11	+,-,+,+	RNF121,LOC100133315,RNF121,RNF121	308,84,308,308
chr19:39234211-39234609	chr19	+	39234234	39234306	True	NM_144691,NM_001042507	chr19,chr19	-,+	CAPN12,LGALS7B	858,45543
chr6:46996671-46998589	chr6	+	46996829	46998465	True	NM_153840,NM_005588	chr6,chr6	-,+	GPR110,MEP1A	11667,-235787
chr3:36938647-36939516	chr3	+	36938873	36939533	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	47065,95307
chr3:53190676-53191052	chr3	+	53190702	53190992	True	NM_006254,NM_052859,NM_212539	chr3,chr3,chr3	+,-,+	PRKCD,RFT1,PRKCD	4230,-26232,4230
chr3:142301025-142302954	chr3	+	142301198	142302389	True	NM_001184,NM_001145319	chr3,chr3	-,+	ATR,PLS1	-3530,12839
chr1:245027985-245028448	chr1	+	245028046	245028441	True	NM_004501,NM_198076,NM_031844	chr1,chr1,chr1	-,+,-	HNRNPU,FAM36A,HNRNPU	-219,-29458,-219
chr3:27486667-27488465	chr3	+	27486679	27488192	True	NM_003615,NM_182523	chr3,chr3	-,+	SLC4A7,CMC1	10112,794931
chr7:150029003-150029930	chr7	+	150029041	150029878	True	NM_001142928,NM_138434,NM_002889,NM_001164458,NM_023942	chr7,chr7,chr7,chr7,chr7	+,+,-,-,+	LRRC61,C7orf29,RARRES2,ACTR3C,LRRC61	-8796,-2154,8936,-8283,-8796
chr8:17435082-17436428	chr8	+	17435214	17436007	True	NM_020749,NM_006207	chr8,chr8	-,+	MTUS1,PDGFRL	119290,-1323
chr22:46544947-46545326	chr22	+	46545058	46545296	True	NM_018280,NM_001001928,NM_005036	chr22,chr22,chr22	-,+,+	C22orf26,PPARA,PPARA	-95034,1202,1202
chr9:34666097-34666499	chr9	+	34666181	34666511	True	NM_006664,NM_004512	chr9,chr9	-,+	CCL27,IL11RA	-3492,-12300
chr16:85214039-85214285	chr16	+	85214112	85214244	True	NR_033984,NM_198491	chr16,chr16	+,-	LOC400548,FAM92B	-43407,-67998
chr9:35956208-35957461	chr9	+	35956371	35957499	True	NR_024283,NM_019897	chr9,chr9	+,-	LOC158376,OR2S2	-46953,702
chr6:107220174-107220697	chr6	+	107220251	107220689	True	NR_033557,NM_001142468	chr6,chr6	-,+	LOC100422737,C6orf203	14663,128717
chr11:77849317-77850199	chr11	+	77849541	77850244	True	NM_024079,NM_001007027,NM_020798	chr11,chr11,chr11	-,-,+	ALG8,ALG8,USP35	505,505,49613
chr1:155892918-155893828	chr1	+	155893095	155893617	True	NR_002974,NM_181885,NR_003005	chr1,chr1,chr1	-,+,-	SNORA42,RXFP4,SCARNA4	-3262,17862,2324
chr16:2654025-2655290	chr16	+	2654127	2655243	True	NR_036139,NR_015441	chr16,chr16	-,+	MIR3178,LOC652276	-72121,-793
chr16:2654025-2655290	chr16	+	2733603	2734049	False	NM_031948,NM_018992	chr16,chr16	-,+	PRSS27,KCTD5	36553,-1159
chrX:148622017-148622269	chrX	+	148622166	148622304	True	NM_001171909,NM_001171907,NM_178124,NM_001171908,NR_027455	chrX,chrX,chrX,chrX,chrX	+,+,+,+,-	CXorf40A,CXorf40A,CXorf40A,CXorf40A,LOC100131434	3761,214,214,214,-854
chr12:57432520-57432798	chr12	+	57432632	57432802	True	NM_007264,NM_005379	chr12,chr12	+,-	GPR182,MYO1A	-44328,11141
chr4:44715751-44716279	chr4	+	44715906	44715970	True	NM_138335,NM_021927	chr4,chr4	-,+	GNPDA2,GUF1	12696,-35525
chr15:93198511-93198721	chr15	+	93198558	93198688	True	NR_033769,NM_207446	chr15,chr15	+,-	ASB9P1,FAM174B	140025,393
chr11:6518575-6519451	chr11	+	6518718	6519438	True	NM_173589,NM_144666,NM_012402	chr11,chr11,chr11	+,+,-	DNHD1,DNHD1,ARFIP2	-243,-243,-16123
chr3:185217118-185217803	chr3	+	185217141	185217794	True	NM_080652,NM_021627	chr3,chr3	-,+	TMEM41A,SENP2	-296,86236
chr5:34840087-34840340	chr5	+	34840279	34840341	True	NM_144725,NR_026591	chr5,chr5	+,-	TTC23L,RAD1	-1061,75440
chr14:35873604-35874218	chr14	+	35873700	35874206	True	NM_002791,NM_020529	chr14,chr14	+,-	PSMA6,NFKBIA	-112177,-70
chr4:6578577-6578816	chr4	+	6578581	6578741	True	NM_020416,NM_015274	chr4,chr4	-,+	PPP2R2C,MAN2B2	-104255,-1730
chr19:51323435-51325101	chr19	+	51323456	51324947	True	NM_138564,NM_138563,NM_002257,NM_033068,NM_017509	chr19,chr19,chr19,chr19,chr19	-,-,-,+,-	KLK15,KLK15,KLK1,ACPT,KLK15	9882,9882,2146,-29835,9882
chr19:18144674-18146066	chr19	+	18145996	18146086	True	NM_015683,NM_005535	chr19,chr19	+,-	ARRDC2,IL12RB1	-27070,51661
chr3:155426792-155428072	chr3	+	155426792	155427771	True	NM_003875,NM_014996	chr3,chr3	+,-	GMPS,PLCH1	160553,-4795
chr12:50793486-50794572	chr12	+	50793829	50794613	True	NR_033200,NM_052879,NM_001145475,NM_199190,NM_001170804,NM_001170803,NM_199188,NM_001170808	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,-,+,+,+,+,+	LARP4,LARP4,FAM186A,LARP4,LARP4,LARP4,LARP4,LARP4	-22,-22,-3424,-22,-22,-22,-22,-22
chr2:106015872-106016155	chr2	+	106015929	106016029	True	NM_001450,NM_201555,NM_001039492,NM_024093	chr2,chr2,chr2,chr2	-,-,-,+	FHL2,FHL2,FHL2,C2orf49	-248,-248,-354,-61973
chr13:115001404-115002430	chr13	+	115001571	115002371	True	NM_001078645,NM_003903,NM_007368	chr13,chr13,chr13	+,+,-	CDC16,CDC16,RASA3	-1260,-1260,-103476
chr19:36347931-36348307	chr19	+	36347938	36348014	True	NM_199180,NM_004646,NM_032123,NM_199179	chr19,chr19,chr19,chr19	+,-,+,+	KIRREL2,NPHS1,KIRREL2,KIRREL2	-179,-5043,-179,-179
chr2:135809862-135810176	chr2	+	135809874	135810176	True	NM_025052,NM_012233,NM_001172435	chr2,chr2,chr2	-,+,+	YSK4,RAB3GAP1,RAB3GAP1	-27626,-90,-90
chr2:63276999-63277262	chr2	+	63277066	63277250	True	NR_027069,NM_014562,NM_001199770,NR_033389	chr2,chr2,chr2,chr2	-,+,+,-	LOC100132215,OTX1,OTX1,LOC100132215	-2220,686,-47,-1410
chr17:40686799-40687620	chr17	+	40687235	40687573	True	NM_000263,NM_013290	chr17,chr17	+,-	NAGLU,PSMC3IP	377,42224
chrX:153057277-153058139	chrX	+	153057399	153058111	True	NM_001204526,NM_001204527,NM_174869,NR_037927,NM_004135,NM_006280	chrX,chrX,chrX,chrX,chrX,chrX	+,+,-,+,-,+	SSR4,SSR4,IDH3G,SSR4,IDH3G,SSR4	1792,1518,1906,1792,1906,1907
chr17:3461038-3461241	chr17	+	3461037	3461139	True	NM_145068,NM_001031681	chr17,chr17	-,+	TRPV3,CTNS	200,78622
chr1:1679225-1680267	chr1	+	1680005	1680189	True	NM_182838,NM_001198995,NM_001199787,NR_002946	chr1,chr1,chr1,chr1	-,-,-,+	SLC35E2,NADK,SLC35E2,MMP23A	-2567,9942,-2567,-48692
chr2:33121392-33122005	chr2	+	33121400	33121944	True	NR_027100,NM_021209	chr2,chr2	+,-	LOC285045,NLRC4	-13583,-630588
chr2:95942143-95942502	chr2	+	95942148	95942370	True	NM_001165978,NM_144707,NM_032788,NM_001165977	chr2,chr2,chr2,chr2	+,+,-,+	PROM2,PROM2,ZNF514,PROM2	-1998,-1998,-116885,-1998
chr1:33116181-33116584	chr1	+	33116228	33116533	True	NM_001135255,NM_001135256,NM_178547,NM_005610	chr1,chr1,chr1,chr1	+,+,-,+	RBBP4,RBBP4,ZBTB8OS,RBBP4	215,425,-43,215
chr1:169839083-169839453	chr1	+	169839083	169839491	True	NM_020423,NM_018186	chr1,chr1	-,+	SCYL3,C1orf112	23635,-74588
chr10:3216261-3216868	chr10	+	3216396	3216674	True	NM_002627,NM_014889	chr10,chr10	+,-	PFKP,PITRM1	-106695,-1393
chr18:3384716-3386624	chr18	+	3384995	3386252	True	NM_019856,NM_174886	chr18,chr18	-,+	MYOM1,TGIF1	-164889,25819
chr1:9296206-9296440	chr1	+	9296348	9296444	True	NM_004285,NR_029610	chr1,chr1	+,-	H6PD,MIR34A	-1543,-84512
chr12:110940408-110940769	chr12	+	110940634	110940776	True	NM_016226,NM_152442,NM_057180	chr12,chr12,chr12	-,+,-	VPS29,RAD9B,VPS29	-718,-680,-718
chr4:172734589-172734829	chr4	+	172734734	172734810	True	NR_036751,NM_001034845	chr4,chr4	-,+	HSP90AA6P,GALNTL6	-1208599,-210
chr19:44174582-44174956	chr19	+	44174612	44174919	True	NM_001005376,NM_001005377,NM_019612,NM_002659	chr19,chr19,chr19,chr19	-,-,+,-	PLAUR,PLAUR,IRGC,PLAUR	-114,-114,45294,-114
chr3:11178796-11179413	chr3	+	11178816	11179402	True	NM_001098213,NR_027102	chr3,chr3	+,-	HRH1,LOC285370	-88,-372939
chr12:15497046-15498528	chr12	+	15497078	15498170	True	NM_032918,NM_030667	chr12,chr12	-,+	RERG,PTPRO	-122667,-21654
chr12:124773903-124774358	chr12	+	124773964	124774296	True	NM_001077261,NM_181709	chr12,chr12	-,+	NCOR2,FAM101A	277764,-305
chr12:31478332-31478532	chr12	+	31478365	31478479	True	NM_021238,NR_026806,NM_001135812,NM_001135811	chr12,chr12,chr12,chr12	-,+,-,-	FAM60A,FLJ13224,FAM60A,FAM60A	692,-1166,730,692
chr19:42639112-42639926	chr19	+	42639211	42639779	True	NM_022752,NM_002698,NR_036208	chr19,chr19,chr19	+,-,-	ZNF574,POU2F2,MIR4323	-58972,-2581,-1546
chrX:55743953-55744169	chrX	+	55744048	55744172	True	NM_201286,NM_016656,NM_006064	chrX,chrX,chrX	-,+,+	USP51,RRAGB,RRAGB	-228417,11,11
chr7:2886176-2887384	chr7	+	2886638	2886901	True	NM_133463,NM_007353	chr7,chr7	+,-	AMZ1,GNA12	-167531,-2679
chr2:219035819-219036395	chr2	+	219035818	219036428	True	NM_000634,NM_001557,NM_152862	chr2,chr2,chr2	-,+,+	CXCR1,CXCR2,ARPC2	-4102,-45133,45445
chr10:72971003-72971215	chr10	+	72971015	72971261	True	NM_000281,NM_170744	chr10,chr10	-,+	PCBD1,UNC5B	-322474,1036
chr19:37997834-37999462	chr19	+	37997920	37999210	True	NM_001013659,NM_152484	chr19,chr19	+,-	ZNF793,ZNF569	-130,-39581
chr4:38805966-38807257	chr4	+	38806130	38807230	True	NM_003263,NM_138389	chr4,chr4	-,+	TLR1,FAM114A1	52,62123
chr1:15780620-15780864	chr1	+	15780795	15780865	True	NM_033440,NM_001229	chr1,chr1	+,-	CELA2A,CASP9	2357,70125
chrX:72781425-72782850	chrX	+	72781848	72782871	True	NR_029423,NM_001039840	chrX,chrX	-,+	LOC139201,CHIC1	100,112
chr11:20407861-20408271	chr11	+	20408050	20408175	True	NM_001029865,NM_005788,NM_001145166,NM_001145167	chr11,chr11,chr11,chr11	-,+,+,+	DBX1,PRMT3,PRMT3,PRMT3	-226180,900,900,900
chrX:153670567-153672255	chrX	+	153670721	153672012	True	NM_001009934,NM_004699,NM_001493	chrX,chrX,chrX	-,+,+	DNASE1L1,FAM50A,GDI1	-30294,472,-5513
chr19:19052174-19052493	chr19	+	19052280	19052492	True	NM_004838,NR_027297,NM_001145722,NM_001145721,NR_033677,NM_001145724	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,+,-	HOMER3,HOMER3,HOMER3,HOMER3,DDX49,HOMER3	-239,-1836,-1167,-1119,-21847,-2422
chr16:29873145-29873597	chr16	+	29873363	29873503	True	NM_006319,NR_024370,NR_015396	chr16,chr16,chr16	-,+,+	CDIPT,LOC440356,LOC440356	1125,1500,1651
chr3:150947357-150948055	chr3	+	150947537	150948101	True	NM_053002,NM_001081455	chr3,chr3	+,-	MED12L,P2RY14	-142919,18947
chr3:142464721-142465622	chr3	+	142464871	142465634	True	NM_003304,NM_013363	chr3,chr3	+,-	TRPC1,PCOLCE2	-21667,142462
chr6:84923417-84923919	chr6	+	84923494	84923690	True	NM_014895,NM_138409	chr6,chr6	-,+	KIAA1009,MRAP2	13695,-180125
chr17:75276464-75276979	chr17	+	75276602	75276944	True	NM_001113492,NM_001113491,NR_036200	chr17,chr17,chr17	+,+,-	SEPT9,SEPT9,MIR4316	7028,547,116242
chr12:57522466-57523011	chr12	+	57522599	57522959	True	NM_002332,NR_033659	chr12,chr12	+,-	LRP1,STAT6	-368,-17403
chrX:153743437-153743992	chrX	+	153743441	153743968	True	NM_001171134,NM_021806,NM_001171132,NM_001171133,NM_001099856,NR_033237	chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,+,-	FAM3A,FAM3A,FAM3A,FAM3A,IKBKG,FAM3A	649,649,649,649,26490,649
chr10:129927198-129929093	chr10	+	129928001	129928691	True	NM_130435,NM_002417,NM_001145966	chr10,chr10,chr10	+,-,-	PTPRE,MKI67,MKI67	-82246,-3533,-3533
chr3:30934505-30936131	chr3	+	30934664	30935872	True	NM_207359,NM_003242	chr3,chr3	-,+	GADL1,TGFBR2	331,-286730
chr3:121378487-121379697	chr3	+	121378522	121379598	True	NM_005335,NM_016298	chr3,chr3	-,+	HCLS1,FBXO40	243,-66403
chr14:37666166-37666685	chr14	+	37666232	37666708	True	NM_138731,NM_030631,NM_001195297,NM_001195296	chr14,chr14,chr14,chr14	+,-,+,+	MIPOL1,SLC25A21,MIPOL1,MIPOL1	409,-24367,409,409
chr2:243031883-243032310	chr2	+	243031958	243032323	True	NM_005018	chr2	-	PDCD1	-230900
chr3:135913998-135914210	chr3	+	135914000	135914234	True	NM_000532,NM_001145417,NM_018133	chr3,chr3,chr3	+,-,-	PCCB,MSL2,MSL2	54932,-690,504
chr12:52867473-52868126	chr12	+	52867584	52868083	True	NM_173086,NM_002284	chr12,chr12	-,+	KRT6C,KRT86	-15,-171986
chr10:70290271-70291840	chr10	+	70290497	70290873	True	NM_030625,NM_152707	chr10,chr10	+,-	TET1,SLC25A16	29243,-3217
chr3:49444797-49445564	chr3	+	49445002	49445348	True	NM_001664,NM_022171	chr3,chr3	-,+	RHOA,TCTA	4242,4290
chr17:33447601-33448837	chr17	+	33448064	33448875	True	NM_002878,NR_037711,NR_037712,NR_037714,NM_133629,NM_017559,NM_001142571	chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,+,-	RAD51L3,RAD51L3,RAD51L3,RAD51L3-RFFL,RAD51L3,FNDC8,RAD51L3	-1176,-1176,-1176,-37,-1176,1,-1176
chr7:45962466-45963022	chr7	+	45962540	45962995	True	NM_000596,NM_000598,NM_001013398	chr7,chr7,chr7	+,-,-	IGFBP1,IGFBP3,IGFBP3	-34632,-1669,-1669
chr20:9811316-9812449	chr20	+	9811317	9812030	True	NM_177990,NM_022096,NM_020341	chr20,chr20,chr20	-,+,-	PAK7,ANKRD5,PAK7	7707,203666,7707
chr5:55033123-55033395	chr5	+	55033328	55033394	True	NM_173514,NM_001142549,NM_001166533,NM_024415	chr5,chr5,chr5,chr5	-,+,+,+	SLC38A9,DDX4,DDX4,DDX4	-25165,450,450,450
chr9:35620742-35621478	chr9	+	35620847	35621437	True	NM_001782,NM_006285	chr9,chr9	-,+	CD72,TESK1	-2423,-15627
chr7:65337608-65338005	chr7	+	65337675	65337927	True	NM_000181,NM_173517	chr7,chr7	-,+	GUSB,VKORC1L1	109424,329
chr6:26597912-26598142	chr6	+	26597917	26598171	True	NM_013375,NM_024639	chr6,chr6	+,-	ABT1,ZNF322A	-788,61842
chr12:7080735-7081319	chr12	+	7080790	7081191	True	NR_029779,NM_007273,NR_029682,NM_001144831,NR_003010,NM_006331	chr12,chr12,chr12,chr12,chr12,chr12	+,-,+,-,-,+	MIR200C,PHB2,MIR141,PHB2,SCARNA12,EMG1	-7981,-899,-7583,-874,-4021,-899
chr16:754546-754914	chr16	+	754545	754877	True	NM_153350,NM_024042	chr16,chr16	-,+	FBXL16,METRN	998,10295
chr2:203128923-203129546	chr2	+	203129116	203129338	True	NM_003352,NM_015934	chr2,chr2	-,+	SUMO1,NOP58	-25794,1176
chr5:1631748-1632132	chr5	+	1631949	1632016	True	NR_003713,NM_004553	chr5,chr5	-,+	LOC728613,NDUFS6	2161,169479
chr3:184972078-184972588	chr3	+	184972121	184972579	True	NM_001966,NM_004721,NM_001166415	chr3,chr3,chr3	-,+,-	EHHADH,MAP3K13,EHHADH	-235,108390,-235
chr19:49052348-49053221	chr19	+	49052499	49053101	True	NM_177973,NM_001080434	chr19,chr19	+,-	SULT2B1,LMTK3	2327,-36053
chr5:137047255-137047702	chr5	+	137047261	137047346	True	NM_017415,NR_002713	chr5,chr5	-,+	KLHL3,NPY6R	24484,89535
chr11:57104738-57106408	chr11	+	57105332	57106384	True	NM_002559,NM_003146	chr11,chr11	+,-	P2RX3,SSRP1	62,-1981
chr5:133342153-133342789	chr5	+	133342456	133342656	True	NR_036625,NR_036624,NM_003374,NM_003202	chr5,chr5,chr5,chr5	-,-,-,+	VDAC1,VDAC1,VDAC1,TCF7	-1799,-1799,-1632,107745
chr17:76165215-76165616	chr17	+	76165298	76165640	True	NM_003258,NM_004710	chr17,chr17	-,+	TK1,SYNGR2	17695,-678
chr6:3228312-3228532	chr6	+	3228339	3228563	True	NM_001135750,NM_178012	chr6,chr6	+,-	PSMG4,TUBB2B	30598,-371
chr20:17280231-17281011	chr20	+	17280344	17280996	True	NM_001195,NM_002594	chr20,chr20	-,+	BFSP1,PCSK2	231067,-72806
chr2:158488316-158489467	chr2	+	158488555	158489359	True	NM_001111033,NM_001111032,NM_001135098,NM_145259	chr2,chr2,chr2,chr2	-,-,+,-	ACVR1C,ACVR1C,UPP2,ACVR1C	-3156,-3156,362331,-3156
chr3:50329032-50329276	chr3	+	50329108	50329314	True	NM_001200016,NM_001200029,NM_003549,NM_001200030,NM_001200031,NM_001200032,NM_012191,NM_001200018,NM_153215,NM_006764	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,-,-,-,-,+,-	NAT6,HYAL3,HYAL3,HYAL3,HYAL3,HYAL3,NAT6,NAT6,C3orf45,IFRD2	7588,7029,7635,7635,7635,7635,7588,7056,-12647,762
chr1:231115247-231116240	chr1	+	231115296	231116072	True	NM_001122835,NM_022786,NM_024525	chr1,chr1,chr1	-,+,-	TTC13,ARV1,TTC13	-678,-532,-678
chr11:63379330-63381036	chr11	+	63379772	63380993	True	NM_006054,NM_001128203,NM_007069	chr11,chr11,chr11	+,-,-	RTN3,PLA2G16,PLA2G16	67928,998,966
chrX:108712493-108714479	chrX	+	108712727	108714505	True	NM_018698,NM_001522	chrX,chrX	+,-	NXT2,GUCY2F	64504,10830
chr2:43019683-43019969	chr2	+	43019715	43019880	True	NM_020744,NM_012205	chr2,chr2	+,-	MTA3,HAAO	-224095,14
chr20:45948812-45949317	chr20	+	45948870	45949178	True	NR_024594,NM_012408	chr20,chr20	+,-	LOC100131496,ZMYND8	-1676,36346
chr8:105472684-105474506	chr8	+	105472890	105474160	True	NM_001385,NM_030788	chr8,chr8	-,+	DPYS,TM7SF4	5174,-120895
chr5:95070597-95071661	chr5	+	95070739	95071328	True	NM_031952,NM_014899	chr5,chr5	-,+	SPATA9,RHOBTB3	-52025,-3952
chr19:9878106-9878464	chr19	+	9878105	9878272	True	NM_001048241,NM_001077624	chr19,chr19	+,-	UBL5,ZNF846	60295,1197
chr2:187558914-187559158	chr2	+	187558927	187559207	True	NM_182521,NM_177454	chr2,chr2	-,+	ZSWIM2,FAM171B	154740,-189
chr17:80707856-80708245	chr17	+	80707958	80708244	True	NM_005993,NM_006822	chr17,chr17	+,-	TBCD,RAB40B	1695,-51360
chr19:58338060-58338346	chr19	+	58338064	58338252	True	NR_024162,NM_001204818	chr19,chr19	-,+	FKBP1AP1,LOC100293516	628,3409
chrX:13769875-13771006	chrX	+	13769979	13771039	True	NM_014563,NM_003611	chrX,chrX	-,+	TRAPPC2,OFD1	-17225,-17198
chr2:113929807-113930803	chr2	+	113930096	113930832	True	NM_012455,NM_003466	chr2,chr2	+,-	PSD4,PAX8	727,105716
chr7:155092304-155092900	chr7	+	155092367	155092950	True	NM_001103176,NM_005542,NM_198337,NM_198336	chr7,chr7,chr7,chr7	-,+,+,+	CNPY1,INSIG1,INSIG1,INSIG1	233648,-2938,-2938,-2938
chr1:236306464-236306743	chr1	+	236306622	236306784	True	NM_002508,NM_003272	chr1,chr1	-,+	NID1,GPR137B	-78141,-841
chr19:47138282-47139383	chr19	+	47138327	47139371	True	NM_033258,NM_000960,NM_005184	chr19,chr19,chr19	-,-,+	GNG8,PTGIR,CALM3	-388,-9973,-33866
chr3:140401411-140401659	chr3	+	140401521	140401663	True	NM_178177,NM_152616	chr3,chr3	-,+	NMNAT3,TRIM42	-1004636,-4706
chr12:49452083-49452588	chr12	+	49452188	49452508	True	NM_003482,NM_005430	chr12,chr12	-,+	MLL2,WNT1	-3081,-80015
chr13:44412948-44414687	chr13	+	44412976	44414387	True	NM_001128303,NM_144974	chr13,chr13	+,-	C13orf31,CCDC122	39032,39489
chr15:64383978-64385365	chr15	+	64384374	64385341	True	NM_032231,NM_148955,NM_001014812,NM_003099,NM_152826	chr15,chr15,chr15,chr15,chr15	-,+,-,+,+	FAM96A,SNX1,FAM96A,SNX1,SNX1	916,2835,916,2835,2835
chr11:64850227-64851310	chr11	+	64850321	64851299	True	NM_006782,NM_080668	chr11,chr11	+,-	ZFPL1,CDCA5	394,366
chr17:66558258-66559246	chr17	+	66558265	66559193	True	NR_027751,NM_212472	chr17,chr17	-,+	FAM20A,PRKAR1A	-3697,-49777
chr7:96635536-96635805	chr7	+	96635568	96635714	True	NM_005222,NR_015448	chr7,chr7	+,-	DLX6,DLX6-AS1	-329,7713
chr2:110870937-110871904	chr2	+	110871186	110871914	True	NM_005434,NR_037626	chr2,chr2	-,+	MALL,LOC100507334	2279,131300
chr3:50396704-50396969	chr3	+	50396711	50396931	True	NM_007022,NM_007024,NM_006545	chr3,chr3,chr3	+,-,-	CYB561D2,TMEM115,NPRL2	-8465,58,-8225
chr9:98276830-98277362	chr9	+	98276829	98277387	True	NM_001010895,NM_001083607,NM_001083602,NM_001083603,NM_001083604,NM_001083605,NM_001083606,NM_000264	chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9	+,-,-,-,-,-,-,-	C9orf102,PTCH1,PTCH1,PTCH1,PTCH1,PTCH1,PTCH1,PTCH1	360512,-7348,1910,1910,-6507,-6507,-7130,-5998
chr1:32674735-32675676	chr1	+	32674907	32675516	True	NM_001160042,NM_018134,NM_001099434,NM_024296,NM_019118	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	IQCC,IQCC,DCDC2B,CCDC28B,TMEM234	-3722,-3722,-263,-8756,12460
chr15:68497688-68497888	chr15	+	68497693	68497911	True	NM_033429,NM_015322,NM_001031733	chr15,chr15,chr15	-,+,-	CALML4,FEM1B,CALML4	587,72229,587
chr9:29260-29485	chr12	-	74146	74204	False	NR_028269,NR_026823	chr12,chr12	+,-	LOC100288778,FAM138D	13779,75258
chr9:29260-29485	chr19	+	71088	71338	False	NR_026820,NR_026818,NM_001005240,NR_033266	chr19,chr19,chr19,chr19	-,-,+,-	FAM138F,FAM138A,OR4F17,WASH5P	6402,6402,39340,-122
chr9:29260-29485	chr15	-	102501433	102501483	False	NR_026819,NR_034090	chr15,chr15	+,-	FAM138E,DDX11L9	-6396,17863
chr9:29260-29485	chr1	+	29481	29731	True	NM_001005221,NR_028325	chr1,chr1	-,+	OR4F29,LOC100132062	592353,294160
chr15:33013279-33013675	chr15	+	33013433	33013683	True	NM_013372,NM_001191323,NM_001191322,NR_036650	chr15,chr15,chr15,chr15	+,+,+,-	GREM1,GREM1,GREM1,LOC100288615	-3286,-3286,-3286,-187491
chr8:59574465-59575765	chr8	+	59574478	59575538	True	NM_005625,NM_003580,NM_001144772	chr8,chr8,chr8	+,-,-	SDCBP,NSMAF,NSMAF	-108801,-2074,-2512
chr17:72425973-72426791	chr17	+	72426050	72426811	True	NM_018653,NM_022036,NM_001080466	chr17,chr17,chr17	+,+,-	GPRC5C,GPRC5C,BTBD17	3024,855,-68092
chr19:14228537-14228782	chr19	+	14228594	14228740	True	NR_024282,NM_207518,NM_002730	chr19,chr19,chr19	+,-,-	LOC113230,PRKACA,PRKACA	-44824,-3602,-35
chr2:230131038-230131622	chr2	+	230131038	230131636	True	NM_174899,NM_001100818,NM_017933	chr2,chr2,chr2	+,-,-	FBXO36,PID1,PID1	655570,4471,4471
chr13:111525228-111525431	chr13	+	111525294	111525406	True	NM_005537,NR_027701	chr13,chr13	+,-	ING1,C13orf29	-157986,-2639
chr19:58326049-58326289	chr19	+	58326153	58326337	True	NM_001204818,NM_024762	chr19,chr19	+,-	LOC100293516,ZNF552	15324,-6
chr1:180604443-180604869	chr1	+	180604600	180604906	True	NM_001135669,NM_032360,NM_004736	chr1,chr1,chr1	+,-,+	XPR1,ACBD6,XPR1	-3505,-132578,-3505
chr1:109101998-109102615	chr1	+	109102038	109102582	True	NM_001010883,NM_001102592	chr1,chr1	+,-	FAM102B,HENMT1	388,101212
chr17:78518182-78518855	chr17	+	78518347	78518896	True	NM_002522,NM_020761,NM_001163034	chr17,chr17,chr17	-,+,+	NPTX1,RPTOR,RPTOR	-67943,-60,-60
chr1:200637358-200638679	chr1	+	200637511	200638568	True	NM_203459,NM_001031725	chr1,chr1	+,-	CAMSAP1L1,DDX59	70117,608
chr1:151116627-151117883	chr1	+	151116710	151117522	True	NM_001178061,NM_030913,NM_001178062,NM_024575	chr1,chr1,chr1,chr1	-,-,-,+	SEMA6C,SEMA6C,SEMA6C,TNFAIP8L2	1668,1668,1668,11582
chr1:153697395-153698880	chr1	+	153697575	153698840	True	NM_023015,NM_004515	chr1,chr1	+,-	INTS3,ILF2	1726,-54096
chr16:23729504-23731290	chr16	+	23730079	23731204	True	NM_022097,NM_033266	chr16,chr16	+,-	CHP2,ERN2	34743,-5258
chr5:150462238-150463592	chr5	+	150462438	150463637	True	NM_002084,NM_006058	chr5,chr5	+,-	GPX3,TNIP1	-62490,-1441
chr14:69325633-69327023	chr14	+	69325867	69326885	True	NM_207442,NM_001193360	chr14,chr14	-,+	C14orf181,EXD2	-62677,331308
chr1:234490746-234492492	chr1	+	234491132	234492522	True	NM_001012985,NM_005646	chr1,chr1	+,-	C1orf31,TARBP1	16906,122377
chr7:44622576-44623788	chr7	+	44622724	44623331	True	NM_182547,NM_001003941,NM_019082	chr7,chr7,chr7	-,+,-	TMED4,OGDH,DDX56	-897,22789,-8587
chr7:131380675-131381233	chr7	+	131380868	131381078	True	NM_005397,NM_013255	chr7,chr7	-,+	PODXL,MKLN1	-139492,-368330
chr19:1277283-1277559	chr19	+	1277367	1277431	True	NM_001280,NR_027271,NM_017914,NR_023313,NR_023312,NM_001405	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+	CIRBP,C19orf23,C19orf24,CIRBP,CIRBP,EFNA2	-8151,-7108,-1898,-8151,-8151,8736
chr20:35373236-35373953	chr20	+	35373301	35373837	True	NM_032013,NM_080628,NM_022477	chr20,chr20,chr20	-,+,-	NDRG3,C20orf118,NDRG3	694,130732,694
chr1:45448213-45449673	chr1	+	45448872	45449272	True	NM_000374,NM_020365,NM_001166588	chr1,chr1,chr1	+,-,-	UROD,EIF2B3,EIF2B3	28532,3139,3139
chr1:8938459-8938707	chr1	+	8938626	8938746	True	NM_001215,NM_001201483,NM_001428	chr1,chr1,chr1	+,-,-	CA6,ENO1,ENO1	67175,-6991,455
chr7:44621158-44621447	chr7	+	44621199	44621429	True	NM_182547,NM_001003941,NM_019082	chr7,chr7,chr7	-,+,-	TMED4,OGDH,DDX56	448,24691,-7062
chr10:104954586-104955104	chr10	+	104954694	104955078	True	NM_012229,NM_001134373,NM_001143909	chr10,chr10,chr10	-,-,+	NT5C2,NT5C2,LOC729020	-1638,-1638,50565
chr15:79608599-79609563	chr15	+	79608740	79609556	True	NM_002891,NM_007364	chr15,chr15	-,+	RASGRF1,TMED3	-225525,-5300
chr15:41246336-41247302	chr15	+	41246341	41246773	True	NM_024111,NM_133639,NM_001142776	chr15,chr15,chr15	+,-,+	CHAC1,RHOV,CHAC1	-756,-79854,-756
chr18:11370511-11371128	chr18	+	11370547	11371138	True	NM_022068,NM_182978	chr18,chr18	-,+	FAM38B,GNAL	-221786,317997
chr19:50001056-50001974	chr19	+	50001194	50001649	True	NR_001285,NR_000020,NR_000021,NR_000019,NR_000018,NM_001015,NR_029703	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,+,-	SNORD35B,SNORD33,SNORD32A,SNORD34,SNORD35A,RPS11,MIR150	-269,-7371,-8022,-7081,-6813,-1611,2535
chr6:33282134-33282711	chr6_mcf_hap5	+	4755904	4756452	False	NM_001145338,NM_001350,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	3067,8140,8140,-24803,2860,2,2,2,8140
chr6:33282134-33282711	chr6	+	33282162	33282710	True	NM_001145338,NM_001350,NR_024517,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	3066,8140,8140,8140,-24805,2859,2,2,2,8140
chr6:33282134-33282711	chr6_cox_hap2	+	4726042	4726522	False	NM_001145338,NM_001350,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	3069,8146,8146,-24867,2862,-66,-66,-66,8146
chr6:33282134-33282711	chr6_dbb_hap3	+	4563553	4564033	False	NM_001145338,NM_001350,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	3067,8144,8144,-24866,2860,-66,-66,-66,8144
chr6:33282134-33282711	chr6_qbl_hap6	+	4514476	4514956	False	NM_001145338,NM_001350,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	3067,8143,8143,-24872,2860,-66,-66,-66,8143
chr14:103243035-103243448	chr14	+	103243067	103243215	True	NM_145726,NM_152326,NM_001199427,NM_003300,NM_145725	chr14,chr14,chr14,chr14,chr14	+,-,+,+,+	TRAF3,ANKRD9,TRAF3,TRAF3,TRAF3	600,-266939,600,600,600
chr2:34205831-34207520	chr2	+	34206289	34207226	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-467398,-253005
chr11:6231216-6231561	chr11	+	6231266	6231512	True	NM_173525,NM_001098794	chr11,chr11	+,-	C11orf42,FAM160A2	-4519,24479
chr21:40548723-40550484	chr21	+	40549134	40550540	True	NM_004627,NM_203433,NM_003720	chr21,chr21,chr21	+,-,-	WRB,PSMG1,PSMG1	201672,4958,4958
chr20:32702798-32704092	chr20	+	32702884	32703921	True	NM_016732,NM_003908	chr20,chr20	+,-	RALY,EIF2S2	-121204,-2799
chr19:21513421-21513749	chr19	+	21513612	21513744	True	NR_027130,NM_021269	chr19,chr19	+,-	ZNF738,ZNF708	27990,-1400
chr21:43342116-43343195	chr21	+	43342137	43343105	True	NM_199050,NR_027273	chr21,chr21	-,+	C2CD2,C21orf121	3755,99007
chr1:26855763-26856070	chr1	+	26855850	26855994	True	NM_002953,NM_173574	chr1,chr1	+,-	RPS6KA1,ZNF683	254,-156584
chr10:24498279-24498514	chr10	+	24498301	24498505	True	NM_019590,NM_001098501,NM_020824	chr10,chr10,chr10	+,+,-	KIAA1217,KIAA1217,ARHGAP21	-641,-641,514156
chr1:160341130-160341705	chr1	+	160341164	160341654	True	NM_004371,NM_005598	chr1,chr1	-,+	COPA,NHLH1	-27810,-4354
chr2:192108349-192109729	chr2	+	192108429	192109491	True	NM_001130158,NM_012223,NM_003151,NM_001161819	chr2,chr2,chr2,chr2	+,+,-,+	MYO1B,MYO1B,STAT4,MYO1B	615,615,-92504,762
chr10:124317810-124318495	chr10	+	124317823	124318541	True	NM_017579,NM_001010912,NM_004406,NM_007329	chr10,chr10,chr10,chr10	+,-,+,+	DMBT1,C10orf120,DMBT1,DMBT1	1639,140847,1639,1639
chr13:41573097-41574515	chr13	+	41573198	41574464	True	NM_007187,NM_001145353	chr13,chr13	+,-	WBP4,ELF1	61232,-16780
chr6:26045826-26046217	chr6	+	26045935	26046243	True	NM_021062,NM_003531	chr6,chr6	-,+	HIST1H2BB,HIST1H3C	-2050,-347
chr17:35767580-35767969	chr17	+	35767583	35767655	True	NM_001488,NM_001166105,NM_133439,NM_198839,NM_198834	chr17,chr17,chr17,chr17,chr17	+,+,+,-,-	TADA2A,TADA2A,TADA2A,ACACA,ACACA	-324,-659,-324,-681,-681
chr2:110967053-110968244	chr2	+	110967126	110968026	True	NM_207181,NM_001128178,NM_001128179,NR_037626,NM_000272	chr2,chr2,chr2,chr2,chr2	-,-,-,+,-	NPHP1,NPHP1,NPHP1,LOC100507334,NPHP1	-4487,-4487,-4487,35188,-4487
chr7:23511387-23511898	chr7	+	23511407	23511949	True	NR_026676,NM_006547	chr7,chr7	+,-	RPS2P32,IGF2BP3	18057,-1412
chr8:7928433-7928657	chr8	+	7928523	7928693	True	NR_031689,NR_027424	chr8,chr8	-,+	MIR548I3,FAM66E	17968,-116039
chr8:7928433-7928657	chr8	-	12453437	12453497	False	NR_037492,NR_037495	chr8,chr8	-,+	MIR3926-1,MIR3926-2	131366,131248
chr8:7928433-7928657	chr8	-	7074001	7074065	False	NR_027000,NM_001164452	chr8,chr8	-,+	LOC349196,FAM90A14	46999,40360
chr8:7928433-7928657	chr8	-	7532491	7532661	False	NM_001136572,NM_001164452	chr8,chr8	-,+	FAM90A7,FAM90A14	-92316,40303
chr9:34381032-34381308	chr9	+	34381065	34381251	True	NM_147168,NM_147169,NM_020702,NM_147173	chr9,chr9,chr9,chr9	-,-,-,+	C9orf24,C9orf24,KIAA1161,NUDT2	397,397,-4171,-51612
chr19:58661398-58661680	chr19	+	58661397	58661705	True	NM_024620,NM_133502	chr19,chr19	-,+	ZNF329,ZNF274	493,32690
chr2:149403463-149404400	chr2	+	149403488	149404025	True	NM_181742,NM_015630	chr2,chr2	-,+	ORC4,EPC2	-624315,-979
chr14:93675077-93676520	chr14	+	93675082	93676292	True	NM_001100417,NM_175748,NM_032490	chr14,chr14,chr14	+,+,-	UBR7,UBR7,C14orf142	-1738,-1738,-1623
chr6:43421386-43422412	chr6	+	43421649	43422380	True	NM_023932,NM_033450,NM_206539,NM_001146016	chr6,chr6,chr6,chr6	-,+,-,+	DLK2,ABCC10,DLK2,TJAP1	956,-22212,1456,22880
chr5:132086327-132087462	chr5	+	132086345	132087439	True	NM_007054,NM_001039780	chr5,chr5	-,+	KIF3A,CCNI2	-13080,-3272
chr10:50748757-50750450	chr10	+	50748818	50749926	True	NM_020984,NM_000124	chr10,chr10	+,-	CHAT,ERCC6	67214,-1671
chr10:38729334-38730937	chr10	+	38729934	38730014	True	NR_027269,NR_024497	chr10,chr10	-,+	SEPT7L,LOC399744	-38154,-12912
chr11:110583758-110584279	chr11	+	110583858	110584265	True	NM_020809,NM_004109	chr11,chr11	-,+	ARHGAP20,FDX1	-407,-283315
chr18:28976476-28977709	chr18	+	28976653	28977716	True	NM_177986,NM_024421	chr18,chr18	+,-	DSG4,DSC1	-19971,-233834
chr22:20614898-20615235	chr22	+	20615219	20615273	True	NM_015672,NM_003426	chr22,chr22	-,+	RIMBP3,ZNF74	-153433,133206
chr22:20614898-20615235	chr22	-	18762262	18762316	False	NM_017414,NR_003267	chr22,chr22	+,-	USP18,GGT3P	-129555,17208
chr22:20614898-20615235	chr22	-	20367296	20367350	False	NR_003563,NR_026919	chr22,chr22	-,+	PI4KAP1,LOC150197	31395,-173492
chr22:20614898-20615235	chr22	-	21563355	21563409	False	NR_024583,NR_002829	chr22,chr22	+,-	POM121L8P,P2RX6P	73304,-164817
chr2:47138560-47138781	chr2	+	47138608	47138795	True	NM_139279,NM_001171509,NM_020458,NM_001171507,NM_001171510,NM_001171506	chr2,chr2,chr2,chr2,chr2,chr2	-,-,+,-,-,-	MCFD2,MCFD2,TTC7A,MCFD2,MCFD2,MCFD2	4265,4265,29517,4509,4509,4265
chr15:40630070-40630369	chr15	+	40630159	40630277	True	NM_001145643,NM_207380	chr15,chr15	+,-	PHGR1,C15orf52	12956,2947
chr12:102845962-102847183	chr12	+	102846195	102847216	True	NM_001111284,NM_017915	chr12,chr12	-,+	IGF1,C12orf48	25264,-332305
chrY:1522974-1523185	chrY	+	1523148	1523234	True	NR_026711,NM_001173474,NM_001173473,NM_004192	chrY,chrY,chrY,chrY	+,-,-,-	ASMTL-AS1,ASMTL,ASMTL,ASMTL	-53775,-1278,-493,-1278
chrY:1522974-1523185	chrX	+	1573148	1573234	False	NR_026711,NM_001173474,NM_001173473,NM_004192	chrX,chrX,chrX,chrX	+,-,-,-	ASMTL-AS1,ASMTL,ASMTL,ASMTL	-53775,-1278,-493,-1278
chr4:114057759-114058003	chr4	+	114057850	114057923	True	NR_031641,NR_029857	chr4,chr4	+,-	MIR1243,MIR302B	-29890,-488137
chr12:56754309-56755175	chr12	+	56754312	56755224	True	NM_198332,NM_005419,NM_016584,NM_001638	chr12,chr12,chr12,chr12	-,-,+,-	STAT2,STAT2,IL23A,APOF	-275,-275,-21704,1409
chr19:44529728-44530034	chr19	+	44529786	44529980	True	NM_001129996,NM_013360,NR_033341	chr19,chr19,chr19	+,+,-	ZNF222,ZNF222,LOC100379224	-343,-343,87406
chr3:193948065-193949772	chr3	+	193948353	193949685	True	NR_024480,NM_005524	chr3,chr3	-,+	LOC100131551,HES1	80958,-94480
chr3:10883028-10883313	chr3	+	10883139	10883339	True	NR_027102,NM_014229	chr3,chr3	-,+	LOC285370,SLC6A11	-77262,-25273
chr9:5625505-5625875	chr9	+	5625522	5625702	True	NM_018465,NM_001135920	chr9,chr9	-,+	C9orf46,KIAA1432	-187662,3624
chr1:206991402-206992783	chr1	+	206991461	206992617	True	NM_013371,NM_000572	chr1,chr1	+,-	IL19,IL10	9604,-45622
chr19:53931637-53933124	chr19	+	53932073	53932959	True	NR_003148,NM_001008401,NM_033341	chr19,chr19,chr19	+,+,-	LOC147804,ZNF761,BIRC8	2281,2267,-137198
chr17:46112920-46114228	chr17	+	46113408	46114276	True	NM_003204,NR_029687,NM_016429	chr17,chr17,chr17	+,-,-	NFE2L1,MIR152,COPZ2	11409,387,926
chr9:124060352-124060773	chr9	+	124060384	124060790	True	NM_004099,NM_000177	chr9,chr9	-,+	STOM,GSN	71805,1288
chr9:124502020-124503601	chr9	+	124502049	124503637	True	NR_003191,NM_138709	chr9,chr9	-,+	GGTA1,DAB2IP	-239743,1426
chr20:46031273-46031768	chr20	+	46031493	46031683	True	NM_183048,NR_024594	chr20,chr20	-,+	ZMYND8,LOC100131496	-46019,-84298
chr6:97047561-97049132	chr6	+	97047607	97048878	True	NM_001143957,NM_020482	chr6,chr6	-,+	GPR63,FHL5	236526,-37247
chr2:99260495-99261219	chr2	+	99260516	99260850	True	NM_001160154,NM_014044	chr2,chr2	-,+	MGAT4A,UNC50	19142,-35536
chr14:90798924-90800419	chr14	+	90799047	90800468	True	NM_199043,NM_017970,NM_006888	chr14,chr14,chr14	-,-,+	C14orf102,C14orf102,CALM1	-768,-768,62858
chr6:127588696-127589646	chr6	+	127588745	127589527	True	NM_030963,NM_001139510	chr6,chr6	+,-	RNF146,ECHDC1	-776,74075
chr2:229353929-229355298	chr2	+	229354268	229355328	True	NM_178821,NM_030623	chr2,chr2	+,-	WDR69,SPHKAP	-618005,-307907
chrX:71527737-71528083	chrX	+	71527841	71528037	True	NM_004143,NM_001170747,NM_001144885,NM_001144886,NM_001144887	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	CITED1,PIN4,CITED1,CITED1,CITED1	-1004,-126374,-2077,-804,-2077
chr1:153644107-153644513	chr1	+	153644267	153644334	True	NM_000906,NM_004515	chr1,chr1	+,-	NPR1,ILF2	6829,-788
chr3:169669410-169670298	chr3	+	169669595	169670185	True	NM_003262,NR_027622	chr3,chr3	+,-	SEC62,LOC100128164	14394,14387
chr17:4870034-4870271	chr17	+	4870094	4870224	True	NM_004890,NM_053013	chr17,chr17	-,+	SPAG7,ENO3	958,-15761
chr12:7244250-7244543	chr12	+	7244250	7244498	True	NR_026947,NM_001733	chr12,chr12	+,-	LOC283314,C1R	16405,595
chr17:7235051-7235470	chr17	+	7235242	7235362	True	NM_001005408,NM_032442,NM_014716	chr17,chr17,chr17	-,-,+	NEURL4,NEURL4,ACAP1	-2604,-2604,4485
chr3:178984450-178984830	chr3	+	178984556	178984872	True	NM_016331,NR_028135,NM_171829,NM_171828,NM_001163677	chr3,chr3,chr3,chr3,chr3	+,-,-,-,-	ZNF639,KCNMB3,KCNMB3,KCNMB3,KCNMB3	56678,-6877,-6877,16,16
chr13:30947644-30948603	chr13	+	30947683	30948523	True	NM_005800,NR_024464	chr13,chr13	+,-	USPL1,LOC100188949	243306,-65
chr5:112885833-112887309	chr5	+	112885862	112887016	True	NM_022828,NM_001085377	chr5,chr5	+,-	YTHDC2,MCC	-36522,-61335
chr12:58181670-58182903	chr12	+	58181754	58182753	True	NM_023033,NM_001172697,NM_001172695,NM_001172696,NM_005726	chr12,chr12,chr12,chr12,chr12	-,+,+,+,+	METTL1,TSFM,TSFM,TSFM,TSFM	-15840,-5288,-5288,-5288,-5288
chr8:142134261-142134540	chr8	+	142134427	142134575	True	NM_001080431,NM_014957	chr8,chr8	-,+	SLC45A4,DENND3	104148,4144
chr17:56434548-56435415	chr17	+	56434657	56435234	True	NR_027647,NM_003168	chr17,chr17	+,-	LPO,SUPT4H1	-118921,-5094
chr6:35769363-35770075	chr6	+	35769456	35770094	True	NM_001832,NM_182548	chr6,chr6	-,+	CLPS,LHFPL5	-4354,2976
chr10:120937093-120937538	chr10	+	120937177	120937398	True	NM_005308,NM_014098,NM_006793	chr10,chr10,chr10	+,-,-	GRK5,PRDX3,PRDX3	29798,1002,1002
chr15:90745396-90745750	chr15	+	90745531	90745777	True	NM_198925,NM_006384	chr15,chr15	+,-	SEMA4B,CIB1	-1020,31552
chr8:81179230-81180918	chr8	+	81179439	81180622	True	NM_005079,NM_001105539	chr8,chr8	-,+	TPD52,ZBTB10	-95603,217825
chr2:48667637-48667896	chr2	+	48667686	48667844	True	NM_152994,NM_000233,NM_001193475,NM_001135629,NR_024188	chr2,chr2,chr2,chr2,chr2	+,-,+,+,+	KLRAQ1,LHCGR,KLRAQ1,KLRAQ1,KLRAQ1	63,315086,63,63,63
chr17:36004120-36005311	chr17	+	36004122	36005054	True	NM_007010,NM_007026	chr17,chr17	-,+	DDX52,DUSP14	-629,-154222
chr7:135195220-135195837	chr7	+	135195324	135195858	True	NM_001190847,NM_001190850,NM_001190849,NM_001190848,NM_001008225,NM_015135,NM_013316	chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,+,-	CNOT4,CNOT4,CNOT4,CNOT4,CNOT4,NUP205,CNOT4	-449,-449,-449,-449,-449,46803,-449
chr16:89161980-89162185	chr16	+	89162033	89162225	True	NM_001127214,NR_023316,NM_174917,NM_005187	chr16,chr16,chr16,chr16	+,+,+,-	ACSF3,ACSF3,ACSF3,CBFA2T3	-1831,-1831,-1831,-118529
chr18:55862109-55862723	chr18	+	55862111	55862611	True	NM_001144970,NM_005603	chr18,chr18	+,-	NEDD4L,ATP8B1	25,-391784
chr12:94071695-94072702	chr12	+	94071846	94072673	True	NM_003348,NM_003805	chr12,chr12	-,+	UBE2N,CRADD	-235820,-746
chr19:2097453-2097779	chr19	+	2097455	2097519	True	NM_001031735,NM_001039846,NM_130807	chr19,chr19,chr19	+,+,-	IZUMO4,IZUMO4,MOBKL2A	-638,-638,-1186
chr16:14918380-14918603	chr16	+	14918413	14918613	True	NR_023387,NM_014287	chr16,chr16	-,+	ABCC6P2,NOMO1	-4,9029
chr16:14918380-14918603	chr16	+	16317178	16317378	False	NM_001171,NM_001079528,NM_001004067	chr16,chr16,chr16	-,-,+	ABCC6,ABCC6,NOMO3	0,0,9010
chr16:14918380-14918603	chr16	-	18582510	18582710	False	NR_003569,NM_173614,NM_001004060	chr16,chr16,chr16	+,-,-	ABCC6P1,NOMO2,NOMO2	9,-9076,-9076
chr3:145878212-145878534	chr3	+	145878273	145878465	True	NM_182943,NM_000935,NM_003412	chr3,chr3,chr3	-,-,+	PLOD2,PLOD2,ZIC1	867,867,1248715
chr8:37459059-37459677	chr8	+	37459130	37459664	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	93636,145950
chr12:31910569-31911034	chr12	+	31910701	31910906	True	NR_004854,NM_001135863	chr12,chr12	-,+	AMN1,METTL20	-28593,-98143
chr15:81585191-81585812	chr15	+	81585396	81585742	True	NM_004513,NM_181900	chr15,chr15	+,-	IL16,STARD5	3511,30832
chr15:75748189-75748446	chr15	+	75748287	75748383	True	NM_001145357,NM_015477,NM_024608,NM_001145358	chr15,chr15,chr15,chr15	-,-,+,-	SIN3A,SIN3A,NEIL1,SIN3A	-163,-4361,-109007,-4200
chr20:45176392-45176966	chr20	+	45176430	45176968	True	NM_030777,NM_080721	chr20,chr20	+,-	SLC2A10,C20orf123	161310,2295
chr2:68289861-68290113	chr2	+	68289942	68290126	True	NM_001190265,NM_173177,NM_006333,NM_001190263,NM_020143	chr2,chr2,chr2,chr2,chr2	-,-,-,-,+	C1D,C1D,C1D,C1D,PNO1	83,83,83,83,94878
chr1:61552880-61554422	chr1	+	61553353	61554374	True	NM_001145512,NM_032027,NM_005595,NM_001134673	chr1,chr1,chr1,chr1	+,-,+,+	NFIA,TM2D1,NFIA,NFIA	-5870,636772,-5424,-5424
chr2:131329283-131329776	chr2	+	131329342	131329787	True	NR_027313,NR_033930,NR_027314	chr2,chr2,chr2	+,+,+	LOC150527,LOC646743,LOC150527	-974,-991,-971
chr2:131329283-131329776	chr2	-	131306102	131306547	False	NR_027313,NR_033930,NR_027314	chr2,chr2,chr2	-,-,-	LOC150527,LOC646743,LOC150527	974,991,971
chr9:113435401-113437050	chr9	+	113435431	113436745	True	NM_153366,NM_005592,NM_001166280,NM_001166281	chr9,chr9,chr9,chr9	-,+,+,+	SVEP1,MUSK,MUSK,MUSK	-93271,-4444,-4444,-4444
chrX:15381929-15382741	chrX	+	15382005	15382738	True	NM_004469,NM_203281	chrX,chrX	-,+	FIGF,BMX	19848,136161
chr19:51106893-51107623	chr19	+	51107495	51107557	True	NR_004384,NM_032298	chr19,chr19	+,-	SNAR-F,SYT3	662,33795
chr2:232458094-232458596	chr2	+	232458143	232458583	True	NM_006056,NM_152614	chr2,chr2	-,+	NMUR1,C2orf57	-62961,-619
chrX:37022825-37024075	chrX	+	37022925	37023532	True	NM_006520,NM_001013736	chrX,chrX	-,+	DYNLT3,FAM47C	683412,2899
chr17:66256079-66256493	chr17	+	66256079	66256449	True	NM_014960,NM_001174166	chr17,chr17	+,-	ARSG,SLC16A6	-807,31008
chr17:74639170-74639847	chr17	+	74639179	74639875	True	NM_018414,NR_004395	chr17,chr17	-,+	ST6GALNAC1,SNORD1A	69,-81515
chr11:111797346-111797700	chr11	+	111797351	111797707	True	NM_001885,NM_080659	chr11,chr11	-,+	CRYAB,C11orf52	-14878,-7801
chr17:7757902-7758152	chr17	+	7758110	7758182	True	NM_032356,NM_144607,NM_203411	chr17,chr17,chr17	-,+,+	LSMD1,CYB5D1,TMEM88	3040,2881,201
chr18:61329344-61329953	chr18	+	61329344	61329852	True	NM_080475,NM_006919	chr18,chr18	+,-	SERPINB11,SERPINB3	40341,-147
chr18:61329344-61329953	chr18	+	61311707	61312215	False	NM_012397,NM_002974	chr18,chr18	+,-	SERPINB13,SERPINB4	-57234,-205
chr5:148726732-148727200	chr5	+	148726771	148727217	True	NM_152407,NM_014443	chr5,chr5	+,-	GRPEL2,IL17B	-1852,31681
chr6:11234016-11234495	chr6	+	11234128	11234524	True	NM_001135575,NM_182966,NM_006403	chr6,chr6,chr6	+,-,-	LOC221710,NEDD9,NEDD9	-139914,-1213,-1213
chr2:56411852-56412150	chr2	+	56411856	56412052	True	NM_001080433,NR_030623	chr2,chr2	+,-	CCDC85A,MIR216B	-649,-183926
chrX:10123035-10124331	chrX	+	10123192	10124362	True	NM_001830,NM_000273	chrX,chrX	+,-	CLCN4,GPR143	622,-389187
chr7:100964346-100964646	chr7	+	100964597	100964695	True	NM_001130821,NM_001130820,NM_022777,NM_001130822,NM_133457	chr7,chr7,chr7,chr7,chr7	-,-,-,-,+	RABL5,RABL5,RABL5,RABL5,EMID2	448,448,448,448,41426
chr2:3644967-3645416	chr2	+	3645103	3645406	True	NM_199235,NM_002936,NM_024027	chr2,chr2,chr2	+,-,+	COLEC11,RNASEH1,COLEC11	-2517,-39163,-2517
chr2:115250795-115251052	chr2	+	115250795	115251077	True	NR_034130,NM_001178036	chr2,chr2	-,+	LOC100499194,DPP10	-513234,-31666
chr21:46132169-46132923	chr21	+	46132251	46132731	True	NM_198699,NM_144991	chr21,chr21	+,-	KRTAP10-12,TSPEAR	-15215,-756
chr7:65339020-65339514	chr7	+	65339121	65339395	True	NM_000181,NM_173517	chr7,chr7	-,+	GUSB,VKORC1L1	107964,-915
chr7:65339020-65339514	chr7	+	64499594	64499644	False	NR_033416,NM_001007253	chr7,chr7	+,-	CCT6P3,ERV3	-913,-32470
chr19:47976960-47977392	chr19	+	47977027	47977375	True	NM_014681,NM_015063	chr19,chr19	+,-	DHX34,SLC8A2	-124540,-1720
chr22:38034110-38034551	chr22	+	38034158	38034600	True	NM_006498,NM_018957	chr22,chr22	-,+	LGALS2,SH3BP1	-58134,1083
chr17:61973937-61974649	chr17	+	61973941	61974662	True	NM_022641,NM_022640,NR_002947,NM_001317	chr17,chr17,chr17,chr17	-,-,+,-	CSH1,CSH1,TCAM1P,CSH1	80,80,-39616,80
chr17:61973937-61974649	chr17	+	61951044	61951550	False	NM_020991,NM_022645,NM_022644,NM_022557,NM_022556,NR_002947,NM_002059,NM_022558	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,+,-,-	CSH2,CSH2,CSH2,GH2,GH2,TCAM1P,GH2,GH2	45,45,45,7723,7723,-16719,7723,7723
chr12:56618469-56619280	chr12	+	56618682	56619262	True	NM_173596,NM_194359,NM_005785,NM_194358,NM_001135195,NM_024068	chr12,chr12,chr12,chr12,chr12,chr12	+,-,-,-,+,+	SLC39A5,RNF41,RNF41,RNF41,SLC39A5,OBFC2B	4557,-2947,-2978,-2978,5238,-609
chr1:26758424-26758669	chr1	+	26758423	26758577	True	NM_024887,NM_205861,NM_173574	chr1,chr1,chr1	+,+,-	DHDDS,DHDDS,ZNF683	224,224,-59157
chr18:42260750-42260977	chr18	+	42260843	42260977	True	NM_015559,NM_001130110,NR_036203	chr18,chr18,chr18	+,+,-	SETBP1,SETBP1,MIR4319	-38,-763,289212
chr7:80237295-80238683	chr7	+	80237620	80238724	True	NM_001102386,NM_001001547	chr7,chr7	-,+	GNAT3,CD36	-96378,-6177
chr16:90127803-90128477	chr16	+	90127837	90128375	True	NM_052996,NR_023348	chr16,chr16	-,+	PRDM7,GAS8	408,-38880
chr18:47339419-47339765	chr18	+	47339588	47339737	True	NR_003003,NM_006111	chr18,chr18	+,-	SCARNA17,ACAA2	655,564
chr22:43729325-43729745	chr22	+	43729369	43729745	True	NM_173050,NM_001044370	chr22,chr22	-,+	SCUBE1,MPPED1	9660,78274
chr3:176044521-176044991	chr3	+	176044799	176044859	True	NM_207015,NM_024665	chr3,chr3	+,-	NAALADL2,TBL1XR1	-1467739,870239
chr11:108199132-108199830	chr11	+	108199297	108199863	True	NM_000051,NM_002519	chr11,chr11	+,-	ATM,NPAT	-105799,-105932
chrX:39645230-39646035	chrX	+	39645394	39646008	True	NM_005765,NM_001123385	chrX,chrX	+,-	ATP6AP2,BCOR	794207,310761
chrX:140677001-140677827	chrX	+	140677247	140677849	True	NM_013453,NM_145662	chrX,chrX	+,+	SPANXA1,SPANXA2	9,-15
chrX:140677001-140677827	chrX	-	140672845	140672895	False	NM_013453,NM_145662	chrX,chrX	-,-	SPANXA1,SPANXA2	-9,15
chrX:140677001-140677827	chrX	-	140786607	140786657	False	NM_032417,NM_013453,NM_145665	chrX,chrX,chrX	-,+,-	SPANXD,SPANXA1,SPANXE	-9,-108799,48
chr4:79714486-79715807	chr4	+	79714757	79715657	True	NM_198892,NM_001040202	chr4,chr4	+,-	BMP2K,PAQR3	-17287,144989
chr21:46358975-46359444	chr21	+	46359014	46359345	True	NM_058190,NR_027128,NR_027129	chr21,chr21,chr21	+,-,-	C21orf70,C21orf67,C21orf67	609,534,534
chr1:202127963-202129615	chr1	+	202128189	202129467	True	NR_002930,NR_037663,NR_037664,NM_001199797,NM_080588,NM_002832	chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,-,-,-	PTPRVP,PTPN7,PTPN7,PTPN7,PTPN7,PTPN7	7711,1299,1299,1299,-78,1299
chr10:104516089-104516498	chr10	+	104516329	104516545	True	NM_004311,NM_001083913	chr10,chr10	-,+	ARL3,C10orf26	-42139,-12662
chr1:220960783-220961204	chr1	+	220960838	220961052	True	NM_022746,NM_012414	chr1,chr1	+,-	MOSC1,RAB3GAP2	-850,-514995
chrX:48646425-48646762	chrX	+	48646568	48646808	True	NM_002049,NM_013271	chrX,chrX	+,-	GATA1,PCSK1N	-1637,47202
chr6:45399742-45400954	chr6	+	45399741	45401004	True	NM_004348,NM_181356	chr6,chr6	+,-	RUNX2,SUPT3H	-9879,-54071
chr2:23691860-23692746	chr2	+	23691930	23692782	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	457202,-83690
chr18:5197418-5197743	chr18	+	5197441	5197785	True	NM_001145194,NR_015389	chr18,chr18	-,+	LOC642597,LOC339290	-186,40313
chr2:208029974-208030233	chr2	+	208030016	208030278	True	NM_003709,NM_173077	chr2,chr2	-,+	KLF7,CPO	386,-225797
chr9:114249152-114250789	chr9	+	114249564	114250036	True	NM_001080398,NM_133464	chr9,chr9	-,+	KIAA0368,ZNF483	-2539,37410
chr7:140706079-140707419	chr7	+	140706363	140707238	True	NM_016071,NM_053035,NM_001195278	chr7,chr7,chr7	-,-,+	MRPS33,MRPS33,LOC100131199	7298,7600,66793
chr12:12226102-12227226	chr12	+	12226124	12227264	True	NM_138722,NM_138723,NM_030766,NM_002336	chr12,chr12,chr12,chr12	+,+,+,-	BCL2L14,BCL2L14,BCL2L14,LRP6	-1776,-2300,-1776,192597
chr2:29206012-29207247	chr2	+	29206301	29207233	True	NM_199280,NM_001029883	chr2,chr2	+,-	FAM179A,C2orf71	-2188,89944
chr5:150834432-150835290	chr5	+	150834494	150835164	True	NM_078483,NM_181776	chr5,chr5	+,-	SLC36A1,SLC36A2	-7382,-107343
chr3:122787715-122788069	chr3	+	122787755	122788105	True	NR_028444,NM_006810,NM_001031702	chr3,chr3,chr3	+,+,-	PDIA5,PDIA5,SEMA5B	-1950,-1950,-41179
chr19:55360059-55361919	chr19	+	55361621	55361753	True	NM_006737,NM_001127255	chr19,chr19	+,-	KIR3DL2,NLRP7	144,97170
chr3:128367129-128367977	chr3	+	128367492	128367922	True	NM_004637,NM_002950	chr3,chr3	+,-	RAB7A,RPN1	77056,1855
chr17:27069331-27069663	chr17	+	27069582	27069662	True	NM_004295,NM_001160407	chr17,chr17	+,-	TRAF4,TLCD1	1360,-15633
chr10:43970687-43970984	chr10	+	43970971	43971043	True	NR_026693,NM_001098204	chr10,chr10	+,-	ZNF487P,HNRNPF	-38454,-66275
chr17:47075378-47075651	chr17	+	47075463	47075529	True	NM_004123,NM_006546,NM_001160423	chr17,chr17,chr17	-,+,+	GIP,IGF2BP1,IGF2BP1	-29508,-740,-740
chr1:55105434-55106982	chr1	+	55105575	55106904	True	NR_026782,NR_037639,NM_001039464,NR_037640,NR_037641,NM_176782	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-	HEATR8,HEATR8-TTC4,HEATR8,HEATR8-TTC4,HEATR8-TTC4,FAM151A	522,522,522,522,522,-16375
chr5:57903781-57905642	chr5	+	57905026	57905562	True	NM_006622,NM_138453	chr5,chr5	-,+	PLK2,RAB3C	-149113,-26138
chr6:139349537-139349954	chr6	+	139349536	139349994	True	NM_031922,NM_021243	chr6,chr6	-,+	REPS1,C6orf115	-40138,118
chr1:154574951-154576801	chr1	+	154575049	154576799	True	NM_015841,NM_015840,NM_001193495,NM_000748,NM_001111	chr1,chr1,chr1,chr1,chr1	-,-,-,+,-	ADAR,ADAR,ADAR,CHRNB2,ADAR	3975,3975,2027,-34843,3975
chr9:4662948-4663230	chr9	+	4662955	4663281	True	NM_203453,NM_001039395	chr9,chr9	+,-	PPAPDC2,C9orf68	-708,3445
chr3:105085760-105085998	chr3	+	105085843	105085977	True	NM_170662,NM_001627	chr3,chr3	-,+	CBLB,ALCAM	501960,-181
chr2:233271931-233272605	chr2	+	233272081	233272651	True	NM_031313,NR_028501	chr2,chr2	+,-	ALPPL2,ECEL1P2	-580,-20327
chr19:1754099-1754451	chr19	+	1754132	1754438	True	NM_001178002,NM_001080488	chr19,chr19	-,+	ATP8B3,ONECUT3	57811,-521
chr11:118480692-118480943	chr11	+	118480752	118480950	True	NM_001144758,NM_001144759,NM_015157,NM_020153	chr11,chr11,chr11,chr11	+,+,+,-	PHLDB1,PHLDB1,PHLDB1,IFT46	-2497,-2497,-3590,-43961
chr19:48018479-48018726	chr19	+	48018507	48018717	True	NM_015711,NM_003827	chr19,chr19	+,-	GLTSCR1,NAPA	92735,-10
chr20:34824048-34824286	chr20	+	34824067	34824298	True	NR_027451,NM_015511	chr20,chr20	-,+	LOC647979,C20orf4	-185185,148
chr8:7924623-7925624	chr8	+	7924702	7925045	True	NR_031689,NR_027424	chr8,chr8	-,+	MIR548I3,FAM66E	21617,-112218
chr8:7924623-7925624	chr8	-	12456958	12457010	False	NR_037492,NR_037495	chr8,chr8	-,+	MIR3926-1,MIR3926-2	127855,127735
chr11:18128363-18128600	chr11	+	18128487	18128559	True	NR_026576,NM_138421,NM_054031	chr11,chr11,chr11	-,-,+	SAA3P,SAAL1,MRGPRX3	9170,-849,13942
chr2:132175261-132176123	chr2	+	132175292	132175968	True	NR_002826,NR_036499	chr2,chr2	-,+	LOC401010,LOC389043	26557,-14876
chr16:49861076-49861524	chr16	+	49861220	49861412	True	NM_153261,NM_015069	chr16,chr16	+,-	TMEM188,ZNF423	197776,-302
chr11:33062654-33063767	chr11	+	33062705	33063649	True	NM_018393,NM_001145541,NM_001326	chr11,chr11,chr11	+,+,-	TCP11L1,TCP11L1,CSTF3	-1794,-1196,119438
chr14:103802841-103803830	chr14	+	103802930	103803608	True	NM_183004,NR_002964,NR_033938,NM_001969	chr14,chr14,chr14,chr14	+,+,-,+	EIF5,SNORA28,LOC100131366,EIF5	-1753,577,-147565,-2496
chr3:52273258-52273870	chr3	+	52273268	52273686	True	NM_001122870,NM_007284,NM_144641	chr3,chr3,chr3	+,-,+	PPM1M,TWF2,PPM1M	6499,-85,6122
chr11:34535116-34535641	chr11	+	34535203	34535491	True	NM_001422,NM_001752,NM_198381	chr11,chr11,chr11	-,+,-	ELF5,CAT,ELF5	-1,-74782,-1857
chr11:3521772-3522234	chr11	+	3521897	3522009	True	NM_007152,NR_024248	chr11,chr11	-,+	ZNF195,LOC650368	-121449,-119757
chr1:165414581-165414884	chr1	+	165414619	165414931	True	NM_006917,NR_033824,NM_001005214	chr1,chr1,chr1	-,-,+	RXRG,RXRG,LRRC52	-27,-27,98546
chr21:37506512-37506743	chr21	+	37506516	37506767	True	NM_017438,NM_001236	chr21,chr21	-,+	SETD4,CBR3	-73700,495
chr9:41592435-41592839	chr9	+	41592434	41592552	True	NM_001113541,NR_027861	chr9,chr9	+,-	FAM75A5,ZNF658B	-91811,-227
chr9:41592435-41592839	chr9	+	40775058	40775124	False	NR_026801,NM_033160	chr9,chr9	+,-	FAM74A3,ZNF658	-59599,17050
chr9:41592435-41592839	chr9	+	39447415	39447533	False	NR_027861,NM_001040065	chr9,chr9	-,+	ZNF658B,FAM75A2	-227,-91772
chr19:55797089-55797745	chr19	+	55797101	55797781	True	NM_012267,NM_032430,NM_001130106	chr19,chr19,chr19	-,+,-	HSPBP1,BRSK1,HSPBP1	-5350,-1618,-5350
chr12:8219018-8220413	chr12	+	8219017	8220016	True	NM_004054,NM_015509	chr12,chr12	-,+	C3AR1,NECAP1	-62,14790
chr2:233562565-233563962	chr2	+	233562618	233564000	True	NM_015575,NM_001172416,NM_001103146,NM_001103147,NM_001103148	chr2,chr2,chr2,chr2,chr2	+,-,+,+,+	GIGYF2,KCNJ13,GIGYF2,GIGYF2,GIGYF2	-654,77325,-654,-654,-654
chr1:147599269-147600084	chr1	+	147599484	147599554	True	NM_001101663,NM_001097616	chr1,chr1	-,+	NBPF24,GPR89C	10577,-173968
chr1:147599269-147600084	chr1	+	16918730	16918980	False	NR_037446,NM_017940	chr1,chr1	+,-	MIR3675,NBPF1	-43572,21252
chr1:147599269-147600084	chr1	+	148346966	148347031	False	NM_001164262,NM_001170755	chr1,chr1	-,+	PPIAL4F,NBPF15	-144430,211156
chr1:147599269-147600084	chr1	+	146057647	146057717	False	NM_001101663,NM_001097616	chr1,chr1	-,+	NBPF24,GPR89C	10578,-173830
chr1:147599269-147600084	chr1	-	146395073	146395143	False	NR_024442,NR_002305	chr1,chr1	-,+	LOC728989,PDIA3P	119506,254286
chr1:147599269-147600084	chr1	-	145293150	145293207	False	NM_032305,NM_001039703	chr1,chr1	-,+	POLR3GL,NBPF10	177237,163
chr1:147599269-147600084	chr1	-	144614856	144614933	False	NR_003242,NM_001037675	chr1,chr1	-,+	C1orf152,NBPF9	-2129,25
chr1:31408944-31409480	chr1	+	31409192	31409354	True	NR_033295,NR_004054,NR_002762	chr1,chr1,chr1	-,-,+	SNORD103B,SNORD103A,PRO0611	-569,-569,51557
chr1:170242673-170243439	chr1	+	170242720	170243468	True	NR_036065,NR_026957	chr1,chr1	+,-	MIR3119-2,LOC284688	-122254,9931
chr14:68003983-68004598	chr14	+	68004403	68004523	True	NM_020715,NM_182526	chr14,chr14	+,-	PLEKHH1,TMEM229B	-4453,-22382
chr1:161695305-161695825	chr1	+	161695572	161695866	True	NM_001002901,NR_002595	chr1,chr1	+,-	FCRLB,RPL31P11	-3166,-40530
chr5:142061483-142063155	chr5	+	142061502	142063037	True	NM_001135608,NM_000800,NM_033136	chr5,chr5,chr5	+,-,-	ARHGAP26,FGF1,FGF1	87254,2666,3065
chr5:108085034-108085346	chr5	+	108085335	108085395	True	NM_005246,NM_001163315	chr5,chr5	+,-	FER,FBXL17	-1863,-367536
chr22:42486113-42486419	chr22	+	42486201	42486431	True	NM_002490,NR_034118	chr22,chr22	-,+	NDUFA6,LOC100132273	507,505
chr17:48913117-48913318	chr17	+	48913118	48913364	True	NM_005749,NM_175575	chr17,chr17	-,+	TOB1,WFIKKN2	28099,-564
chr17:18087717-18087931	chr17	+	18087794	18087924	True	NM_002018,NM_017758	chr17,chr17	-,+	FLII,ALKBH5	74181,-978
chr17:8199132-8199332	chr17	+	8199167	8199241	True	NM_016492,NM_001177802,NM_201520,NM_001177801	chr17,chr17,chr17,chr17	+,+,-,+	RANGRF,RANGRF,SLC25A35,RANGRF	-7249,-7249,-997,-7249
chr8:22223810-22224566	chr8	+	22223952	22224497	True	NM_015359,NM_001128431,NR_029714,NM_001135154,NM_001135153	chr8,chr8,chr8,chr8,chr8	+,+,-,+,+	SLC39A14,SLC39A14,MIR320A,SLC39A14,SLC39A14	264,264,-121396,264,552
chr11:45308674-45309920	chr11	+	45308796	45309916	True	NM_020826,NM_020229	chr11,chr11	-,+	SYT13,PRDM11	-912,-193283
chr9:95737820-95738084	chr9	+	95737821	95738133	True	NM_031486,NM_033086	chr9,chr9	-,+	ZNF484,FGD3	-97531,-1161
chr4:54967171-54967653	chr4	+	54967202	54967576	True	NM_133267,NM_012110	chr4,chr4	+,-	GSX2,CHIC2	-1006,-36414
chr10:90570614-90572609	chr10	+	90570633	90572467	True	NM_144590,NM_001128215	chr10,chr10	-,+	ANKRD22,LIPM	39324,-8197
chr17:36885064-36885941	chr17	+	36885105	36885990	True	NM_007144,NM_001136498	chr17,chr17	-,+	PCGF2,CISD3	18625,519
chr10:88781296-88781742	chr10	+	88781489	88781757	True	NM_024756,NM_001146157	chr10,chr10	-,+	MMRN2,FAM25A	-64064,-1503
chr10:88781296-88781742	chr10	-	75421881	75422047	False	NM_004922,NM_001114133	chr10,chr10	+,-	SEC24C,SYNPO2L	82083,-6049
chr1:35247790-35247991	chr1	+	35247806	35248040	True	NM_001164824,NM_024009,NM_001005752	chr1,chr1,chr1	-,+,+	C1orf212,GJB3,GJB3	76656,-1067,54
chr2:69236549-69238108	chr2	+	69236590	69238083	True	NM_032208,NM_182536,NM_053034,NM_018153	chr2,chr2,chr2,chr2	+,-,+,+	ANTXR1,GKN2,ANTXR1,ANTXR1	2192,-56488,2192,2192
chr1:116382299-116382910	chr1	+	116382329	116382685	True	NM_018420,NM_001111061,NM_005599	chr1,chr1,chr1	+,-,-	SLC22A15,NHLH2,NHLH2	136433,702,1116
chr8:21997385-21997852	chr8	+	21997473	21997765	True	NM_005144,NM_001172357,NM_018411,NM_025232	chr8,chr8,chr8,chr8	-,+,-,-	HR,SFTPC,HR,REEP4	-8908,21418,-8908,1733
chr7:44835262-44835644	chr7	+	44835356	44835680	True	NM_138635,NM_021130	chr7,chr7	-,+	H2AFV,PPIA	52095,560
chrX:131266177-131266491	chrX	+	131266184	131266330	True	NM_001042452,NM_194277	chrX,chrX	+,-	MST4,FRMD7	-108606,-4134
chr22:19708785-19709080	chr22	+	19708902	19709074	True	NM_024627,NM_001009939,NM_002688,NR_037611,NR_037612,NM_000407	chr22,chr22,chr22,chr22,chr22,chr22	-,+,+,+,+,+	C22orf29,SEPT5,SEPT5,SEPT5-GP1BB,SEPT5-GP1BB,GP1BB	133347,-2995,-6966,-4210,-2961,1991
chr19:15195391-15197355	chr19	+	15195602	15197242	True	NM_001004713,NM_006844	chr19,chr19	+,-	OR1I1,ILVBL	634,39392
chr7:6537450-6537952	chr7	+	6537493	6537975	True	NM_006854,NM_001134387	chr7,chr7	-,+	KDELR2,ZDHHC4	-13644,79089
chr5:79950211-79950434	chr5	+	79950264	79950386	True	NM_001190470,NM_002439,NM_000791	chr5,chr5,chr5	-,+,-	MTRNR2L2,MSH3,DHFR	-3410,-21,464
chr5:79950211-79950434	chr18	+	23751206	23751420	False	NM_005637,NM_144662	chr18,chr18	-,+	SS18,PSMA8	-80595,-37441
chr18:39557610-39558016	chr18	+	39557779	39557882	True	NM_002647,NR_002838	chr18,chr18	+,-	PIK3C3,KC6	-22638,-457218
chr16:24860810-24861072	chr16	+	24860935	24861065	True	NM_001006634,NM_052944	chr16,chr16	-,+	ARHGAP17,SLC5A11	165660,-3434
chr13:114239726-114240138	chr13	+	114239899	114240187	True	NM_000705,NM_007111,NR_026580	chr13,chr13,chr13	-,+,+	ATP4B,TFDP1,TFDP1	72384,-894,-947
chr2:241939461-241939819	chr2	+	241939461	241939867	True	NR_033841,NM_001080437	chr2,chr2	-,+	LOC200772,SNED1	-32593,-1257
chr18:13219465-13219740	chr18	+	13219554	13219766	True	NM_002828,NM_181482,NM_181481	chr18,chr18,chr18	-,+,+	PTPN2,C18orf1,C18orf1	-335220,-819,-819
chr17:79881666-79882015	chr17	+	79881786	79881964	True	NM_002359,NM_016538,NR_015454,NM_032711	chr17,chr17,chr17,chr17	-,-,+,-	MAFG,SIRT7,LOC92659,MAFG	3674,-5728,3740,-378
chr19:15079195-15080579	chr19	+	15079213	15080449	True	NM_005071,NM_012377	chr19,chr19	-,+	SLC1A6,OR7C2	3331,-26963
chr5:89770786-89771687	chr5	+	89770813	89771492	True	NM_006467,NM_203406	chr5,chr5	+,-	POLR3G,MBLAC2	-183,-228
chr8:27168343-27168723	chr8	+	27168430	27168722	True	NM_173174,NM_171982	chr8,chr8	+,-	PTK2B,TRIM35	276,162
chr8:80681947-80682579	chr8	+	80682014	80682574	True	NM_001040708,NM_007029,NM_012258	chr8,chr8,chr8	-,+,-	HEY1,STMN2,HEY1	-1916,-159016,-1916
chr7:44105098-44105719	chr7	+	44105162	44105686	True	NM_000290,NM_014063	chr7,chr7	-,+	PGAM2,DBNL	24,-20974
chr1:47082631-47082849	chr1	+	47082784	47082894	True	NM_201403,NM_001145474,NM_145279	chr1,chr1,chr1	-,+,-	MOBKL2C,C1orf223,MOBKL2C	-221,54605,-1979
chr7:44613999-44615395	chr7	+	44614042	44615155	True	NM_182547,NM_001003941,NM_019082	chr7,chr7,chr7	-,+,-	TMED4,OGDH,DDX56	6727,30965,95
chr16:58546453-58547477	chr16	+	58546478	58547493	True	NM_001160305,NR_002978,NM_024860	chr16,chr16,chr16	+,-,+	SETD6,SNORA46,SETD6	1889,35101,1889
chrX:129536165-129536472	chrX	+	129536218	129536500	True	NM_016024,NM_178471	chrX,chrX	+,-	RBMX2,GPR119	-326,-16707
chr8:119936908-119937844	chr8	+	119936918	119937844	True	NM_002546,NM_006438	chr8,chr8	-,+	TNFRSF11B,COLEC10	26590,141579
chr12:51631751-51632342	chr12	+	51631847	51632337	True	NM_014764,NM_001136269,NM_001136268,NR_026893,NM_001136264,NM_001136267,NM_001136266	chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,+,-,+,+,+	DAZAP2,DAZAP2,DAZAP2,POU6F1,DAZAP2,DAZAP2,DAZAP2	170,170,170,-20370,170,170,170
chr14:69727751-69727973	chr14	+	69727757	69727911	True	NM_003861,NM_020692,NM_001168368	chr14,chr14,chr14	-,+,+	DCAF5,GALNTL1,GALNTL1	-107843,-1127,-1127
chr1:76002208-76002411	chr1	+	76002359	76002420	True	NM_000016,NM_001130058	chr1,chr1	+,-	ACADM,SLC44A5	187622,74430
chr12:69003081-69004106	chr12	+	69003836	69004143	True	NM_015646,NM_001010942,NR_033335	chr12,chr12,chr12	+,+,-	RAP1B,RAP1B,SNORA70G	508,508,17062
chr6:134662757-134663235	chr6	+	134662812	134663230	True	NM_004865,NM_001143676	chr6,chr6	+,-	TBPL1,SGK1	-388569,-23616
chr17:48844261-48844562	chr17	+	48844304	48844594	True	NR_024626,NM_016424	chr17,chr17	-,+	C17orf73,LUC7L3	374,-47431
chr6:161423920-161425130	chr6	+	161423980	161425181	True	NM_006724,NR_024277	chr6,chr6	+,-	MAP3K4,NCRNA00241	-11223,157896
chr1:63940165-63940678	chr1	+	63940607	63940721	True	NM_032437,NM_014288	chr1,chr1	+,-	EFCAB7,ITGB3BP	48291,48164
chr3:33759780-33760024	chr3	+	33759807	33760005	True	NM_015097,NR_027868	chr3,chr3	-,+	CLASP2,PDCD6IP	41,80060
chr3:57113890-57115420	chr3	+	57113927	57115467	True	NM_181727,NM_001128615	chr3,chr3	+,-	SPATA12,ARHGEF3	-19511,-591
chr7:45963022-45963231	chr7	+	45963027	45963280	True	NM_000596,NM_000598,NM_001013398	chr7,chr7,chr7	+,-,-	IGFBP1,IGFBP3,IGFBP3	-35119,-2156,-2156
chr10:104191194-104191815	chr10	+	104191265	104191759	True	NM_024040,NR_030169	chr10,chr10	-,+	CUEDC2,MIR146B	714,4509
chr5:148746991-148747880	chr5	+	148747277	148747787	True	NM_024028,NM_014443	chr5,chr5	+,-	PCYOX1L,IL17B	-9758,11101
chr1:197872863-197873342	chr1	+	197872892	197873380	True	NM_001014434,NM_001195216,NM_001024594	chr1,chr1,chr1	+,-,+	LHX9,DENND1B,C1orf53	8254,-128269,-1261
chr1:42619318-42620093	chr1	+	42619382	42620034	True	NM_007102,NM_033553	chr1,chr1	+,-	GUCA2B,GUCA2A	-341,10411
chr16:57566934-57567625	chr16	+	57566982	57567299	True	NM_153837,NM_033212	chr16,chr16	+,-	GPR114,CCDC102A	9301,3228
chr2:132219580-132220274	chr2	+	132219858	132220316	True	NR_002826,NM_080386	chr2,chr2	-,+	LOC401010,TUBA3D	-17391,13349
chr5:79646417-79646803	chr5	+	79646493	79646679	True	NR_003665,NM_032567	chr5,chr5	-,+	CRSP8P,SPZ1	1156,-30754
chr1:110215537-110216505	chr1	+	110215834	110216549	True	NM_005272,NM_001142368,NM_000848	chr1,chr1,chr1	-,+,+	GNAT2,GSTM2,GSTM2	-60129,-5241,-5241
chr1:110215537-110216505	chr1	+	110234957	110235008	False	NM_000561,NM_000849,NM_146421	chr1,chr1,chr1	+,-,+	GSTM1,GSTM3,GSTM1	-4591,48703,-4591
chrX:34962236-34962543	chrX	+	34962239	34962537	True	NM_152631,NM_031442	chrX,chrX	+,-	FAM47B,TMEM47	-1377,-286834
chr4:21545725-21546215	chr4	+	21545725	21546216	True	NM_001035004,NM_145048	chr4,chr4	-,+	KCNIP4,PACRGL	114,-843742
chr4:122770907-122771937	chr4	+	122771108	122771971	True	NM_005033,NM_176824	chr4,chr4	+,-	EXOSC9,BBS7	-48695,19736
chr12:7125810-7126056	chr12	+	7125917	7126093	True	NM_001734,NM_005768	chr12,chr12	+,-	C1S,LPCAT3	41886,-75
chr11:118480377-118480596	chr11	+	118480454	118480636	True	NM_001144758,NM_001144759,NM_015157,NM_020153	chr11,chr11,chr11,chr11	+,+,+,-	PHLDB1,PHLDB1,PHLDB1,IFT46	-2199,-2199,-3292,-43663
chr16:71933646-71935207	chr16	+	71934118	71934867	True	NM_014761,NM_001201556	chr16,chr16	+,-	KIAA0174,ZNF821	-4724,-16025
chr16:1661535-1662201	chr16	+	1661893	1662173	True	NM_020825,NM_014714	chr16,chr16	+,-	CRAMP1L,IFT140	2467,-14
chr9:100955490-100955730	chr9	+	100955578	100955748	True	NM_018946,NM_052820	chr9,chr9	+,-	NANS,CORO2A	-136670,-622
chr19:36235566-36235848	chr19	+	36235621	36235883	True	NM_024660,NM_144987,NM_172341,NM_001040425,NM_019104	chr19,chr19,chr19,chr19,chr19	-,-,+,-,+	IGFLR1,U2AF1L4,PSENEN,U2AF1L4,LIN37	-2270,503,610,503,3628
chr16:30034336-30035130	chr16	+	30034369	30035149	True	NM_031478,NM_001109660,NM_001109659	chr16,chr16,chr16	-,+,+	FAM57B,C16orf92,C16orf92	7087,-157,-157
chr19:2703004-2703445	chr19	+	2703030	2703311	True	NM_003249,NM_052847	chr19,chr19	+,-	THOP1,GNG7	82194,-284
chr19:46172052-46172364	chr19	+	46172065	46172413	True	NM_000164,NR_037512,NR_030372	chr19,chr19,chr19	+,-,+	GIPR,MIR642B,MIR642A	-615,5903,5772
chr6:35655745-35655980	chr6	+	35655744	35655806	True	NM_004117,NM_145028,NM_001145777,NM_001145776	chr6,chr6,chr6,chr6	-,+,-,-	FKBP5,C6orf81,FKBP5,FKBP5	963,49052,963,936
chr8:86037830-86038512	chr8	+	86038265	86038516	True	NM_001099670,NM_033402	chr8,chr8	-,+	C8orf59,LRRCC1	94178,-18999
chr10:30916943-30917261	chr10	+	30917164	30917290	True	NM_183058,NM_005204	chr10,chr10	-,+	LYZL2,MAP3K8	1407,-194362
chr20:31071444-31071773	chr20	+	31071735	31071821	True	NM_080616,NR_034152	chr20,chr20	-,+	C20orf112,LOC149950	-447,103459
chr2:39348301-39349286	chr2	+	39348500	39349207	True	NM_005633,NM_001145451	chr2,chr2	-,+	SOS1,ARHGEF33	-896,-202047
chr5:43392308-43393750	chr5	+	43392524	43393798	True	NM_153361,NM_148672	chr5,chr5	+,-	MGC42105,CCL28	-200255,18740
chr21:45606789-45607000	chr21	+	45606825	45606989	True	NM_198155,NM_015259	chr21,chr21	+,-	C21orf33,ICOSLG	-53382,53895
chrX:106963333-106963777	chrX	+	106963474	106963636	True	NM_001015881,NM_002764,NM_004089	chrX,chrX,chrX	-,+,-	TSC22D3,PRPS1,TSC22D3	-3763,-91871,-3183
chr7:140101245-140102892	chr7	+	140101361	140102486	True	NM_001008749,NM_032295,NM_207113	chr7,chr7,chr7	+,-,-	RAB19,SLC37A3,SLC37A3	1356,-3050,-3050
chr19:47632758-47633164	chr19	+	47632834	47633004	True	NR_027280,NM_015168,NM_001145714,NM_001145713,NM_005500	chr19,chr19,chr19,chr19,chr19	+,-,+,+,+	SAE1,ZC3H4,SAE1,SAE1,SAE1	1110,-15825,1075,1075,1075
chr17:73502573-73503013	chr17	+	73502653	73502977	True	NM_207346,NM_020753,NM_001142643	chr17,chr17,chr17	+,-,-	TSEN54,CASKIN2,CASKIN2	9631,8700,3031
chr9:118940684-118941854	chr9	+	118940731	118941808	True	NM_002581,NR_024032	chr9,chr9	+,-	PAPPA,C9orf27	-24722,-253354
chr1:44458011-44458832	chr1	+	44458237	44458727	True	NM_152499,NM_006934	chr1,chr1	+,-	CCDC24,SLC6A9	-1008,24320
chr3:169379501-169379783	chr3	+	169379521	169379705	True	NM_001205194,NM_004991,NM_001185118	chr3,chr3,chr3	-,-,+	MECOM,MECOM,MYNN	1908,1908,111147
chr2:208891329-208891909	chr2	+	208891647	208891829	True	NM_001080475,NM_001178000	chr2,chr2	-,+	PLEKHM3,PIKFYVE	-1363,239161
chr5:139422417-139422729	chr5	+	139422708	139422774	True	NM_001184935,NM_013982,NM_013983,NM_013981,NM_004883,NM_005859	chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,-,+	NRG2,NRG2,NRG2,NRG2,NRG2,PURA	160,160,160,160,160,70933
chr11:113742211-113743063	chr11	+	113742216	113742963	True	NM_006028,NM_020886	chr11,chr11	+,-	HTR3B,USP28	32625,3350
chr14:38677825-38678128	chr14	+	38677826	38678082	True	NM_001049,NM_175060	chr14,chr14	+,-	SSTR1,CLEC14A	-673,47542
chr5:140719510-140720288	chr5	+	140719517	140720211	True	NM_032095,NM_018922,NM_031993,NM_005642,NM_032009,NM_032011,NM_018915,NM_018916,NM_018912	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,-,+,+,+,+,+	PCDHGB1,PCDHGB1,PCDHGA1,TAF7,PCDHGA2,PCDHGA3,PCDHGA2,PCDHGA3,PCDHGA1	9616,9616,-9316,-19166,-1214,3389,-1214,3389,-9316
chr2:32494849-32495469	chr2	+	32495291	32495472	True	NM_032312,NM_021209,NM_001199138,NM_001199139	chr2,chr2,chr2,chr2	+,-,-,-	YIPF4,NLRC4,NLRC4,NLRC4	7485,-4479,-5342,-4602
chr9:132963185-132963971	chr9	+	132963228	132963962	True	NM_001128826,NM_015033	chr9,chr9	+,-	NCS1,FNBP1	-407,-157755
chr8:96281041-96281253	chr8	+	96281053	96281301	True	NM_177965,NM_024613	chr8,chr8	-,+	C8orf37,PLEKHF2	211,-135155
chrX:23931920-23932293	chrX	+	23931989	23932077	True	NM_024122,NM_001169574,NR_026545,NM_152761	chrX,chrX,chrX,chrX	-,+,-,+	APOO,CXorf58,APOO,CXorf58	-5932,-5917,-5932,-5917
chr5:142810719-142811048	chr5	+	142810793	142810965	True	NM_021182,NM_001018077,NM_001018075,NM_001018074	chr5,chr5,chr5,chr5	+,-,-,-	HMHB1,NR3C1,NR3C1,NR3C1	380760,4170,4170,4170
chr16:56682426-56683290	chr16	+	56682482	56683232	True	NR_003658,NM_005949,NM_005947,NM_005946,NM_005950,NR_027781	chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,-,+	MT1DP,MT1F,MT1B,MT1A,MT1G,MT1DP	-4817,8622,2578,-9955,18795,-4934
chr2:80531806-80532417	chr2	+	80531846	80532458	True	NM_004389,NM_178839	chr2,chr2	+,-	CTNNA2,LRRTM1	-791837,-359
chr15:32767315-32768509	chr15	+	32767733	32768085	True	NR_027470,NM_199357	chr15,chr15	-,+	FAM7A2,ARHGAP11A	-40483,139605
chr15:32767315-32768509	chr15	+	30726346	30726426	False	NM_148911,NR_026858	chr15,chr15	-,+	CHRFAM7A,FAM7A1	-40482,138331
chr15:32767315-32768509	chr15	-	30823951	30824303	False	NM_148911,NR_026858	chr15,chr15	-,+	CHRFAM7A,FAM7A1	-138087,40454
chr6:79717795-79718610	chr6	+	79718257	79718639	True	NM_001010844,NM_017934	chr6,chr6	+,-	IRAK1BP1,PHIP	-141122,69424
chr5:140779698-140781177	chr5	+	140780056	140781165	True	NM_018925,NM_018926,NM_018921,NM_032099,NM_032088,NM_032089,NM_032100,NM_005642,NM_014004	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,+,-,+	PCDHGB5,PCDHGB6,PCDHGA9,PCDHGB5,PCDHGA8,PCDHGA9,PCDHGB6,TAF7,PCDHGA8	-2412,6604,1354,-2412,-8624,1354,6604,-79705,-8624
chr1:222719309-222720932	chr1	+	222719485	222720715	True	NM_024746,NM_198551	chr1,chr1	-,+	HHIPL2,MIA3	779,70728
chr1:239847851-239848495	chr1	+	239848102	239848537	True	NM_000740,NM_022469	chr1,chr1	+,-	CHRM3,GREM2	-55780,926975
chr17:8764237-8764881	chr17	+	8764520	8764908	True	NM_004822,NM_001010855	chr17,chr17	+,-	NTN1,PIK3R6	159950,6136
chr1:11161601-11162567	chr1	+	11161727	11162468	True	NM_021146,NM_002685,NM_001001998	chr1,chr1,chr1	+,-,-	ANGPTL7,EXOSC10,EXOSC10	86929,-1789,-1789
chr17:47922564-47923521	chr17	+	47922615	47923439	True	NM_001077504,NM_001077505,NM_001077506,NM_007067,NM_001077503,NM_170685	chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,+,-,-	TAC4,TAC4,TAC4,MYST2,TAC4,TAC4	1990,1990,1990,-56686,1990,1990
chr19:9694270-9694762	chr19	+	9694472	9694778	True	NM_001008727,NM_001172651	chr19,chr19	-,+	ZNF121,ZNF177	481,-207531
chr11:47471001-47471337	chr11	+	47471121	47471337	True	NM_152264,NM_032645,NM_005055	chr11,chr11,chr11	+,-,-	SLC39A13,RAPSN,RAPSN	-41126,-391,-391
chr12:121019199-121019400	chr12	+	121019203	121019449	True	NM_014868,NM_015918,NM_198202	chr12,chr12,chr12	+,-,-	RNF10,POP5,POP5	-47122,-6,-2
chr1:231381637-231382635	chr1	+	231381803	231382455	True	NM_152379,NM_014236	chr1,chr1	-,+	C1orf131,GNPAT	-4879,-4945
chr4:3552018-3552389	chr4	+	3552359	3552419	True	NM_002337,NM_173660	chr4,chr4	-,+	LRPAP1,DOK7	-18135,-87377
chr3:195940157-195940703	chr3	+	195940564	195940646	True	NM_001039617,NM_152672	chr3,chr3	-,+	ZDHHC19,OSTalpha	-2264,2736
chr1:25292032-25292410	chr1	+	25292150	25292364	True	NM_013943,NM_001031680	chr1,chr1	+,-	CLIC4,RUNX3	-220441,-649
chr17:9731079-9731992	chr17	+	9731315	9731970	True	NM_001105571,NM_004246	chr17,chr17	-,+	DHRS7C,GLP2R	-36714,-1985
chr15:23439217-23440547	chr15	+	23439587	23439875	True	NR_002824,NR_033350	chr15,chr15	-,+	HERC2P2,GOLGA8E	-61328,-4568
chr15:23439217-23440547	chr15	+	28628298	28628352	False	NM_004667,NR_033351,NR_033353	chr15,chr15,chr15	-,+,+	HERC2,GOLGA8F,GOLGA8G	-61003,-4565,-4565
chr15:23439217-23440547	chr15	-	28773574	28773628	False	NR_036443,NR_033351,NR_033353	chr15,chr15,chr15	+,-,-	HERC2P9,GOLGA8F,GOLGA8G	125959,4565,4565
chr15:23439217-23440547	chr15	+	20772189	20772243	False	NM_001145004,NR_027411	chr15,chr15	-,+	GOLGA6L6,GOLGA8C	-25075,-4566
chr15:23439217-23440547	chr15	-	22710922	22710986	False	NR_027407,NM_001001413	chr15,chr15	-,+	GOLGA8DP,GOLGA6L1	4792,25259
chrX:133406296-133406712	chrX	+	133406325	133406735	True	NM_001101357,NR_029523	chrX,chrX	+,-	CCDC160,MIR106A	-35299,-102017
chr12:100967698-100968225	chr12	+	100967708	100968108	True	NM_174942,NM_152317	chr12,chr12	+,-	GAS2L3,DEPDC4	-270,-306851
chr11:33756166-33757072	chr11	+	33756165	33756965	True	NM_203329,NM_203330,NM_203331,NM_012194,NM_000611	chr11,chr11,chr11,chr11,chr11	-,-,-,+,-	CD59,CD59,CD59,C11orf41,CD59	1114,1114,1114,-192339,1114
chr20:37071727-37073257	chr20	+	37071805	37073278	True	NR_002986,NR_002972,NR_015366,NR_027241,NR_003239,NR_003018	chr20,chr20,chr20,chr20,chr20,chr20	+,+,-,-,+,-	SNORA60,SNORA39,LOC388796,LOC388796,SNHG11,SNORA71D	4733,3447,-7843,-7787,2018,-9163
chr11:69926689-69926925	chr11	+	69926698	69926888	True	NM_005247,NM_018043,NR_030691	chr11,chr11,chr11	-,+,+	FGF3,ANO1,ANO1	-292506,-2341,4627
chr16:69756360-69756989	chr16	+	69756455	69756831	True	NM_001025433,NM_000903,NM_199423,NM_001025434	chr16,chr16,chr16,chr16	-,-,+,-	NQO1,NQO1,WWP2,NQO1	3760,3760,39442,3760
chr16:1400306-1400587	chr16	+	1400387	1400633	True	NM_032520,NM_001001410	chr16,chr16	+,-	GNPTG,C16orf42	1266,1290
chr7:148843987-148844305	chr7	+	148844027	148844347	True	NM_170686,NM_001001661	chr7,chr7	+,-	ZNF398,ZNF425	212,-20589
chr2:99071602-99073026	chr2	+	99071871	99072779	True	NM_001008215,NM_004027	chr2,chr2	-,+	C2orf64,INPP4A	152226,-10601
chr11:2443478-2443715	chr11	+	2443524	2443584	True	NM_005706,NM_014555	chr11,chr11	+,-	TSSC4,TRPM5	-20052,741
chr6:86354818-86355675	chr6	+	86355033	86355584	True	NM_006372,NM_002526,NM_001159673,NM_001159675,NM_001159674,NM_001159677,NM_001159676	chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,+,-,-,-,-,-	SYNCRIP,NT5E,SYNCRIP,SYNCRIP,SYNCRIP,SYNCRIP,SYNCRIP	-1990,-195782,-2393,-3864,-2425,-1990,-3864
chr13:40172987-40173681	chr13	+	40172986	40173665	True	NM_020751,NM_005780	chr13,chr13	+,-	COG6,LHFP	56098,3754
chr10:118187857-118188405	chr10	+	118188153	118188423	True	NM_005264,NM_001011709	chr10,chr10	-,+	GFRA1,PNLIPRP3	-155027,-790
chr2:233243437-233243694	chr2	+	233243447	233243723	True	NR_028501,NM_001632	chr2,chr2	-,+	ECEL1P2,ALPP	8081,-150
chr11:806021-806741	chr11	+	806113	806475	True	NM_145887,NM_145886,NM_024698,NM_001191060,NM_001191061,NM_001004,NR_002585	chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,-,+,+	LRDD,LRDD,SLC25A22,SLC25A22,SLC25A22,RPLP2,SNORA52	-863,-863,-9850,-8118,-7844,3460,5205
chr20:37059355-37059584	chr20	+	37059400	37059598	True	NR_015366,NR_002910,NR_002911,NR_003239,NR_003017,NR_027241,NR_003018	chr20,chr20,chr20,chr20,chr20,chr20,chr20	-,-,-,+,-,-,-	LOC388796,SNORA71B,SNORA71A,SNHG11,SNORA71C,LOC388796,SNORA71D	4414,-5422,-3314,15698,-953,4470,3094
chr6:7913864-7915833	chr6	+	7914078	7915731	True	NR_027712,NM_001145549,NM_030810	chr6,chr6,chr6	+,-,-	PIP5K1P1,TXNDC5,TXNDC5	70603,-3768,-3031
chr6:44212327-44213705	chr6	+	44212813	44213405	True	NM_007355,NM_178148	chr6,chr6	+,-	HSP90AB1,SLC35B2	1443,11928
chr6:134493332-134495311	chr6	+	134493383	134495338	True	NM_004865,NM_001143678,NM_005627,NM_001143677	chr6,chr6,chr6,chr6	+,-,-,-	TBPL1,SGK1,SGK1,SGK1	-219133,1787,751,3727
chr9:69139806-69141800	chr9	+	69139948	69141716	True	NR_002836,NM_001098805	chr9,chr9	-,+	PGM5P2,ANKRD20A4	6188,240264
chr9:69139806-69141800	chr9	-	70978167	70978217	False	NR_015423,NM_021965	chr9,chr9	-,+	LOC572558,PGM5	-5410,-6403
chr9:69139806-69141800	chr9	+	68802726	68803621	False	NR_002836,NR_034006	chr9,chr9	-,+	PGM5P2,LOC100132352	344283,-76236
chrX:154109646-154111273	chrX	+	154109697	154111208	True	NR_036049,NM_001007524,NM_001007523,NM_012151,NM_080720,NR_036260,NM_019863,NR_036259,NM_001017990	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,-,-,-,+	MIR1184-1,F8A3,F8A2,F8A1,H2AFB3,MIR1184-3,F8,MIR1184-2,H2AFB1	4576,3441,3441,3426,2108,4576,3420,4576,2108
chrX:154109646-154111273	chrX	-	154691704	154693261	False	NR_036049,NM_001007524,NM_001007523,NM_012151,NM_080720,NR_036260,NR_036259,NM_001017991,NM_001017990	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,-,-,-,-,+,+,-,-	MIR1184-1,F8A3,F8A2,F8A1,H2AFB3,MIR1184-3,MIR1184-2,H2AFB2,H2AFB1	-4578,-3443,-3443,-3428,-2108,-4578,-4578,-2116,-2108
chrX:154109646-154111273	chrX	+	154606762	154608319	False	NR_036049,NM_001007524,NM_001007523,NM_012151,NM_080720,NR_036260,NR_036259,NM_001017991,NM_001017990	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,-,-,+,+	MIR1184-1,F8A3,F8A2,F8A1,H2AFB3,MIR1184-3,MIR1184-2,H2AFB2,H2AFB1	4579,3444,3444,3429,2108,4579,4579,2116,2108
chr2:61110135-61111220	chr2	+	61110245	61110930	True	NM_002908,NR_033980	chr2,chr2	+,-	REL,FLJ16341	-1544,-1796
chr21:40809025-40809508	chr21	+	40809077	40809307	True	NM_001001713,NM_152505	chr21,chr21	+,-	SH3BGR,LCA5L	8489,6877
chr3:141596415-141598333	chr3	+	141596769	141598285	True	NM_001679,NM_001178140	chr3,chr3	+,-	ATP1B3,TFDP2	-1358,120994
chr2:118846133-118846367	chr2	+	118846172	118846416	True	NM_019044,NM_016133	chr2,chr2	-,+	CCDC93,INSIG2	-74433,-173
chr10:112323123-112323621	chr10	+	112323136	112323654	True	NM_005871,NM_005445	chr10,chr10	-,+	SMNDC1,SMC3	-258429,3794
chr16:10781965-10783798	chr16	+	10782145	10783840	True	NM_002484,NM_144674	chr16,chr16	+,-	NUBP1,TEKT5	53857,5013
chr11:125774144-125774366	chr11	+	125774239	125774319	True	NM_031307,NM_013264	chr11,chr11	-,+	PUS3,DDX25	-1123,-18
chr1:187364229-187365907	chr1	+	187364308	187365616	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-714749,-566337
chr21:33676848-33678090	chr21	+	33677178	33678023	True	NM_206898,NM_018944	chr21,chr21	+,-	MRAP,MIS18A	-13107,-25802
chr1:226070828-226071122	chr1	+	226070936	226071132	True	NM_020997,NM_000120,NM_014698	chr1,chr1,chr1	-,+,-	LEFTY1,EPHX1,TMEM63A	5764,-57985,-516
chr9:33511183-33511573	chr9	+	33511213	33511286	True	NR_003667,NR_003573	chr9,chr9	-,+	SUGT1P1,ANXA2P2	-49,112936
chr11:118901686-118902013	chr11	+	118901697	118901907	True	NR_037429,NM_001164280,NM_001164279,NM_001164278,NM_001467,NM_001164277	chr11,chr11,chr11,chr11,chr11,chr11	+,-,-,-,-,-	MIR3656,SLC37A4,SLC37A4,SLC37A4,SLC37A4,SLC37A4	-12094,-1419,-81,-81,-81,-81
chr9:37423004-37423323	chr9	+	37423018	37423154	True	NM_012203,NM_014872	chr9,chr9	+,-	GRHPR,ZBTB5	-362,42303
chr10:45653071-45653694	chr10	+	45653199	45653705	True	NR_033891,NR_024472,NR_036112	chr10,chr10,chr10	+,-,+	LOC338579,LOC100133308,MIR3156-1	-3140,-3155,5756
chr17:16946501-16948341	chr17	+	16946533	16948044	True	NM_015134,NM_201274,NM_012452	chr17,chr17,chr17	+,+,-	MPRIP,MPRIP,TNFRSF13B	-477,-477,-71131
chr6:27176633-27177856	chr6	+	27176729	27177846	True	NM_005865,NM_080593	chr6,chr6	+,-	PRSS16,HIST1H2BK	37655,-62092
chr7:74488667-74489039	chr7	+	74488802	74489054	True	NM_030798,NM_001003795	chr7,chr7	-,+	WBSCR16,GTF2IRD2B	695,19292
chr10:48348689-48350662	chr10	+	48349418	48350698	True	NM_002900,NM_153034	chr10,chr10	-,+	RBP3,ZNF488	40343,4390
chr5:162864766-162864969	chr5	+	162864794	162864960	True	NM_004060,NM_199246,NM_145266	chr5,chr5,chr5	+,+,-	CCNG1,CCNG1,NUDCD2	-268,-268,22233
chr1:154962916-154963750	chr1	+	154962962	154963244	True	NM_025207,NM_003029,NM_018655,NM_001184892,NM_001184891,NM_201398	chr1,chr1,chr1,chr1,chr1,chr1	+,-,+,+,+,+	FLAD1,SHC1,LENEP,FLAD1,FLAD1,FLAD1	-7243,-16003,2817,-7243,-7243,-7243
chr19:19373640-19374176	chr19	+	19373744	19374184	True	NM_023002,NM_001001524,NM_004386	chr19,chr19,chr19	-,-,+	HAPLN4,TM6SF2,NCAN	-148,9940,-51013
chr16:66600565-66600888	chr16	+	66600703	66600847	True	NM_181270,NM_181271,NM_181272,NM_181269,NM_181268,NM_181296,NM_004614,NM_181283,NM_052999	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,+,-,+,+	CMTM1,CMTM1,CMTM1,CMTM1,CMTM1,CMTM1,TK2,CMTM1,CMTM1	-460,-460,-460,-460,-404,-460,-16388,-460,-404
chr14:102092719-102093757	chr14	+	102092732	102093600	True	NR_031649,NM_001362	chr14,chr14	-,+	MIR1247,DIO3	-65973,-65095
chr11:46867641-46868007	chr11	+	46867776	46867900	True	NM_014756,NM_001003676,NM_001008938	chr11,chr11,chr11	-,+,-	CKAP5,C11orf49,CKAP5	1,90350,1
chr20:32252519-32254421	chr20	+	32252791	32254100	True	NM_080825,NM_031231,NM_031232,NM_001024675	chr20,chr20,chr20,chr20	+,-,-,+	C20orf144,NECAB3,NECAB3,C20orf134	-2750,8215,8215,203
chr14:95556289-95556995	chr14	+	95556326	95556993	True	NR_015415,NM_001195573	chr14,chr14	+,-	FLJ45244,DICER1	67031,42897
chr22:26871863-26872471	chr22	+	26872089	26872308	True	NM_152841,NM_001013694,NM_022081	chr22,chr22,chr22	-,+,-	HPS4,SRRD,HPS4	3303,7541,7572
chr7:65340495-65341887	chr7	+	65340892	65341178	True	NM_000181,NM_173517	chr7,chr7	-,+	GUSB,VKORC1L1	106185,-2695
chr2:133175172-133175387	chr2	+	133175206	133175376	True	NM_001508,NR_027020	chr2,chr2	+,-	GPR39,ANKRD30BL	-1110,-159664
chr2:172969436-172971052	chr2	+	172969536	172970960	True	NM_178120,NM_004405	chr2,chr2	+,-	DLX1,DLX2	-19391,-2058
chr5:95296546-95297107	chr5	+	95296630	95296912	True	NR_026936,NM_012081	chr5,chr5	+,-	C5orf27,ELL2	-108745,913
chr17:1395999-1396376	chr17	+	1396032	1396292	True	NM_001080779,NM_001080950,NR_028514,NM_033375	chr17,chr17,chr17,chr17	-,-,+,-	MYO1C,MYO1C,LOC100306951,MYO1C	-31,-6981,23920,-1060
chr1:762295-762639	chr1	+	762298	762632	True	NR_024321,NR_015368	chr1,chr1	-,+	NCRNA00115,LOC643837	320,431
chr1:762295-762639	chr8	-	182646	182964	False	NM_001042416,NM_001042415,NR_003572,NM_173539	chr8,chr8,chr8,chr8	+,+,-,+	ZNF596,ZNF596,RPL23AP53,ZNF596	-313,-313,-328,-497
chr20:39968021-39968670	chr20	+	39968026	39968662	True	NM_052846,NM_022896	chr20,chr20	-,+	EMILIN3,LPIN3	26886,897
chr21:10994452-10994911	chr21	+	10994482	10994866	True	NM_199260,NM_199261,NM_199259,NR_037458	chr21,chr21,chr21,chr21	-,-,-,+	TPTE,TPTE,TPTE,MIR3687	-3562,-3562,-3562,-1168334
chr1:84442991-84443642	chr1	+	84442994	84443556	True	NM_207578,NM_024686	chr1,chr1	+,-	PRKACB,TTLL7	100188,21338
chrX:55039985-55041179	chrX	+	55039991	55041143	True	NM_014481,NM_000032	chrX,chrX	+,-	APEX2,ALAS2	-13262,16404
chr1:179259556-179260257	chr1	+	179259758	179260193	True	NM_001136001,NM_003101	chr1,chr1	-,+	ABL2,SOAT1	-60939,2823
chr3:167788103-167789323	chr3	+	167788271	167789312	True	NM_014498,NR_033843	chr3,chr3	-,+	GOLIM4,LOC646168	24155,-174596
chr22:42476508-42477260	chr22	+	42476594	42477176	True	NM_033318,NM_002490,NR_034118,NM_001002034,NM_000262	chr22,chr22,chr22,chr22,chr22	+,-,+,+,-	C22orf32,NDUFA6,LOC100132273,FAM109B,NAGA	-946,9768,9760,-6390,-9748
chr17:16743165-16743823	chr17	+	16743339	16743731	True	NR_026810,NR_029392	chr17,chr17	+,-	FAM106C,KRT16P2	-51333,-7192
chr17:16743165-16743823	chr17	-	18335639	18336031	False	NM_148918,NR_001443	chr17,chr17	-,+	SHMT1,LOC339240	-68783,-10195
chr17:16743165-16743823	chr17	+	20415003	20415395	False	NM_001190790,NR_029393	chr17,chr17	+,-	CDRT15L2,KRT16P3	67641,-7192
chr4:186391137-186391784	chr4	+	186391168	186391771	True	NM_152775,NM_001114357,NM_001145411	chr4,chr4,chr4	-,+,-	CCDC110,C4orf47,CCDC110	1192,-40674,1192
chr1:89166846-89167707	chr1	+	89167031	89167627	True	NM_001514,NM_006256	chr1,chr1	-,+	GTF2B,PKN2	189725,-17168
chr12:10464102-10465068	chr12	+	10464102	10464640	True	NM_001114396,NM_007334,NM_007360,NM_002262	chr12,chr12,chr12,chr12	+,+,-,+	KLRD1,KLRD1,KLRK1,KLRD1	-7105,-3738,78069,-3738
chr13:103047837-103048434	chr13	+	103047839	103048475	True	NR_036487,NR_036486,NM_175929	chr13,chr13,chr13	+,-,-	LOC283481,LOC283480,FGF14	-962,-970,5699
chr6:147128575-147130500	chr6	+	147128590	147129814	True	NM_024694,NR_003954	chr6,chr6	+,-	C6orf103,LOC729176	-208505,-3630
chr2:23613248-23614465	chr2	+	23613255	23614253	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	535738,-5008
chr16:23607907-23609592	chr16	+	23608201	23608894	True	NM_019116,NM_005003	chr16,chr16	+,-	UBFD1,NDUFAB1	-39393,-562
chr17:10353687-10355522	chr17	+	10354017	10355329	True	NM_017533,NM_020233	chr17,chr17	-,+	MYH4,C17orf48	17600,245597
chr7:152140832-152141575	chr7	+	152140960	152141438	True	NR_002935,NM_170606	chr7,chr7	+,-	FABP5P3,MLL3	-7039,-7870
chr7:152140832-152141575	chr22	-	17074624	17074693	False	NM_014406,NR_001591	chr22,chr22	-,+	CCT8L2,psiTPTE22	-924,8107
chr7:150944826-150945133	chr7	+	150944921	150945181	True	NR_030407,NM_001003801	chr7,chr7	+,-	MIR671,SMARCD3	-9465,618
chr5:26998014-26998673	chr5	+	26998201	26998311	True	NR_033961,NM_016279	chr5,chr5	+,-	LOC729862,CDH9	1928665,40428
chr19:16176426-16177647	chr19	+	16176444	16177691	True	NM_001145160,NM_003290,NM_054113	chr19,chr19,chr19	+,+,-	TPM4,TPM4,CIB3	625,9443,106645
chr4:154277559-154278065	chr4	+	154277740	154277812	True	NM_032117,NR_001562	chr4,chr4	+,-	MND1,ANXA2P1	-11992,-47777
chr15:80261582-80262461	chr15	+	80261698	80262360	True	NM_001114735,NR_028330,NM_004049	chr15,chr15,chr15	-,+,-	BCL2A1,C15orf37,BCL2A1	1339,-46642,1339
chr1:45956849-45957051	chr1	+	45956912	45957074	True	NM_007170,NR_033296,NR_033297,NM_015506,NR_033298	chr1,chr1,chr1,chr1,chr1	-,-,-,+,-	TESK2,CCDC163P,CCDC163P,MMACHC,CCDC163P	-72,8727,8727,8781,8727
chr12:53664090-53664579	chr12	+	53664118	53664526	True	NM_012291,NM_000966	chr12,chr12	+,-	ESPL1,RARG	-2086,-38082
chr1:14741778-14743087	chr1	+	14741778	14742882	True	NM_015209,NR_027136	chr1,chr1	+,-	KAZN,C1orf126	182330,736135
chr8:22926850-22927154	chr8	+	22926856	22927033	True	NM_003842,NM_147187,NR_027140,NM_003841	chr8,chr8,chr8,chr8	-,-,-,+	TNFRSF10B,TNFRSF10B,TNFRSF10B,TNFRSF10C	-156,-156,-156,33293
chr11:59601108-59602931	chr11	+	59601107	59602622	True	NM_004177,NM_005142	chr11,chr11	+,-	STX3,GIF	-78626,10409
chr10:50321464-50323326	chr10	+	50321637	50323075	True	NM_144984,NM_001135196,NM_001031746	chr10,chr10,chr10	-,+,-	C10orf72,C10orf71,C10orf72	534,184111,534
chr12:57847691-57848457	chr12	+	57847826	57848397	True	NM_001167609,NM_001080156,NM_031479,NM_005269,NM_001160045	chr12,chr12,chr12,chr12,chr12	+,-,+,+,+	GLI1,ARHGAP9,INHBE,GLI1,GLI1	5536,23381,698,5536,5520
chr17:7989343-7989580	chr17	+	7989452	7989558	True	NR_036201,NM_001139	chr17,chr17	+,-	MIR4314,ALOX12B	1815,1513
chr12:57153122-57154248	chr12	+	57153390	57153716	True	NM_000946,NM_003725	chr12,chr12	-,+	PRIM1,HSD17B6	-7244,3391
chr13:76106821-76107157	chr13	+	76106837	76107040	True	NM_203497,NM_203495,NM_006002	chr13,chr13,chr13	-,-,+	COMMD6,COMMD6,UCHL3	5004,5004,16886
chr22:20398393-20398920	chr22	+	20398621	20398955	True	NR_003563,NR_026919	chr22,chr22	-,+	PI4KAP1,LOC150197	14,-204817
chr22:20398393-20398920	chr22	+	21088828	21089036	False	NM_002650,NR_026815	chr22,chr22	-,+	PI4KA,TMEM191A	-17,-33477
chr22:20398393-20398920	chr22	+	21842597	21842931	False	NM_015094,NR_003700	chr22,chr22	+,-	HIC2,PI4KAP2	-70955,28899
chr12:109533907-109534753	chr12	+	109534181	109534476	True	NM_001205179,NM_080911,NM_001205180,NM_001145375,NM_001145374,NM_003362,NM_001001655,NR_026930,NR_026931	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,+,-,-,-,+,-,-,-	ALKBH2,UNG,ALKBH2,ALKBH2,ALKBH2,UNG,ALKBH2,ALKBH2,ALKBH2	-2888,922,-2888,-2888,-2888,1446,-2888,-2888,-2888
chr19:8068498-8069559	chr19	+	8068694	8069590	True	NM_001419,NM_001201359	chr19,chr19	-,+	ELAVL1,CCL25	989,48055
chr1:28673660-28674534	chr1	+	28674456	28674529	True	NM_014280,NM_017638	chr1,chr1	-,+	DNAJC8,MED18	-114914,-18994
chr6:147524001-147524239	chr6	+	147524021	147524202	True	NM_001127715,NM_139244,NR_034115	chr6,chr6,chr6	+,+,-	STXBP5,STXBP5,LOC729178	1305,1305,1599
chr8:23387950-23388564	chr8	+	23388115	23388599	True	NM_016612,NM_001128930	chr8,chr8	+,-	SLC25A37,ENTPD4	-1812,-72871
chr19:21103124-21103878	chr19	+	21103347	21103541	True	NM_003429,NR_034060,NM_145297	chr19,chr19,chr19	+,+,-	ZNF85,ZNF85,ZNF626	2517,2517,-258945
chr2:103104711-103105166	chr2	+	103104752	103105007	True	NM_001011552,NM_032718	chr2,chr2	+,-	SLC9A4,MFSD9	-15043,248391
chr16:19079385-19079693	chr16	+	19079437	19079697	True	NM_015092,NM_001190983,NM_016138	chr16,chr16,chr16	-,+,+	SMG1,COQ7,COQ7	-141711,-249,-571
chr8:57123187-57123658	chr8	+	57123187	57123658	True	NM_001011669,NM_002655,NM_001011667,NM_001011670,NM_001011671,NM_024300,NM_001114634,NM_001114635,NM_001011668	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	+,-,+,+,+,+,-,-,+	CHCHD7,PLAG1,CHCHD7,CHCHD7,CHCHD7,CHCHD7,PLAG1,PLAG1,CHCHD7	656,251,656,656,656,656,251,251,656
chr6:82807117-82807804	chr6	+	82807562	82807844	True	NM_006670,NM_015525	chr6,chr6	+,-	TPBG,IBTK	265078,149654
chr16:1127392-1127722	chr16	+	1127392	1127773	True	NM_001172560,NM_001053,NR_027242	chr16,chr16,chr16	+,+,-	SSTR5,SSTR5,LOC146336	-4687,1007,1015
chr15:64389225-64389784	chr15	+	64389235	64389818	True	NM_032231,NM_001014812,NM_148955,NM_003099,NM_152826	chr15,chr15,chr15,chr15,chr15	-,-,+,+,+	FAM96A,FAM96A,SNX1,SNX1,SNX1	-3028,-3028,-1112,-1112,-1112
chr4:5019090-5020339	chr4	+	5019121	5020316	True	NM_018659,NM_018401	chr4,chr4	-,+	CYTL1,STK32B	932,33210
chr5:179235207-179235537	chr5	+	179235359	179235545	True	NM_001142299,NM_001142298,NM_014275,NM_054013	chr5,chr5,chr5,chr5	+,+,-,-	SQSTM1,SQSTM1,MGAT4B,MGAT4B	-1407,-2022,-1407,-5484
chr17:61518541-61519178	chr17	+	61518667	61519047	True	NM_001017917,NM_001017916,NM_000789,NM_001915	chr17,chr17,chr17,chr17	-,-,+,-	CYB561,CYB561,ACE,CYB561	-460,4548,35374,4725
chr16:69370572-69372070	chr16	+	69370578	69371546	True	NM_022341,NM_001199434,NM_016101,NM_032382	chr16,chr16,chr16,chr16	-,+,+,-	PDF,NIP7,NIP7,COG8	-6080,1868,1868,2030
chr11:118019229-118019535	chr11	+	118019261	118019535	True	NR_024527,NM_001142349,NM_001142348,NM_019894,NM_174934	chr11,chr11,chr11,chr11,chr11	-,-,-,+,-	SCN4B,SCN4B,SCN4B,TMPRSS4,SCN4B	-3077,-3077,4145,-71585,4145
chr11:67206432-67206835	chr11	+	67206495	67206817	True	NM_020441,NM_001018070,NM_003952,NM_005608	chr11,chr11,chr11,chr11	-,-,+,-	CORO1B,CORO1B,RPS6KB2,PTPRCAP	4216,4496,-10611,-1342
chr1:151423396-151424427	chr1	+	151423641	151424304	True	NM_145796,NM_015100,NM_207171,NM_002796,NM_001194937,NM_001194938	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,-	POGZ,POGZ,POGZ,PSMB4,POGZ,POGZ	7693,7693,-8960,-51661,7693,7693
chr3:12597772-12598158	chr3	+	12597932	12598178	True	NM_001195279,NM_014160	chr3,chr3	-,+	LOC100129480,MKRN2	-10969,415
chr17:27222051-27222438	chr17	+	27222198	27222400	True	NM_144683,NM_005702,NM_004475	chr17,chr17,chr17	-,+,-	DHRS13,ERAL1,FLOT2	7747,-40214,2373
chrX:49158653-49159885	chrX	+	49158704	49159863	True	NM_001098413,NM_014009	chrX,chrX	+,-	GAGE10,FOXP3	261,-37416
chr3:44905389-44905762	chr3	+	44905425	44905765	True	NR_030290,NM_020696,NM_144638	chr3,chr3,chr3	+,-,+	MIR564,KIAA1143,TMEM42	-2097,-102252,-2069
chr2:9984437-9985831	chr2	+	9984580	9985610	True	NM_006826,NM_005680	chr2,chr2	-,+	YWHAQ,TAF1B	-213474,-1074
chr7:137771886-137772562	chr7	+	137771903	137772442	True	NM_005989,NM_194071	chr7,chr7	+,-	AKR1D1,CREB3L2	-10776,-85057
chr6:7541034-7541521	chr6	+	7541057	7541461	True	NM_004415,NM_001008844,NM_001170693	chr6,chr6,chr6	+,+,-	DSP,DSP,CAGE1	408,408,-151115
chr4:128886847-128887112	chr4	+	128886907	128887111	True	NM_001039717,NM_152778	chr4,chr4	+,-	C4orf29,MFSD8	-497,78
chr3:151104455-151105403	chr3	+	151104835	151105435	True	NM_022788,NR_031678	chr3,chr3	-,+	P2RY12,MIR548H2	-2291,241884
chr7:127255538-127256686	chr7	+	127255770	127256719	True	NM_006193,NM_020369	chr7,chr7	-,+	PAX4,FSCN3	10,-22132
chr9:6324880-6326602	chr9	+	6324882	6325770	True	NM_001001875,NM_001001874,NR_024095,NM_033516	chr9,chr9,chr9,chr9	+,+,-,+	TPD52L3,TPD52L3,RANBP6,TPD52L3	2578,2578,-309242,2578
chr19:16241126-16243066	chr19	+	16241135	16242998	True	NM_032855,NM_054113	chr19,chr19	+,-	HSH2D,CIB3	1839,41338
chr19:56509991-56510967	chr19	+	56510108	56510918	True	NM_176810,NM_153447	chr19,chr19	-,+	NLRP13,NLRP5	-66406,173
chr16:19534854-19535080	chr16	+	19535038	19535122	True	NM_001199022,NM_014711,NM_016641	chr16,chr16,chr16	+,+,-	CP110,CP110,GDE1	56,56,-1588
chr1:228288656-228289671	chr1	+	228289147	228289667	True	NM_181456,NM_181454,NM_181455,NM_181441,NM_181463,NM_181465,NM_181464,NM_024319,NR_037415,NM_181462	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,-,-,-,+,-	MRPL55,MRPL55,MRPL55,MRPL55,MRPL55,MRPL55,MRPL55,C1orf35,MIR3620,MRPL55	7396,7396,7396,7396,7396,7396,7396,1405,-4234,7396
chr9:93591720-93593160	chr9	+	93591856	93592846	True	NM_017594,NM_001174167	chr9,chr9	-,+	DIRAS2,SYK	-186748,-2202
chr7:44081627-44083444	chr7	+	44082186	44082458	True	NR_024116,NM_001014436,NM_001122956,NR_015401,NM_014063,NR_024416	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,+,+	RASA4P,DBNL,DBNL,FLJ35390,DBNL,FLJ35390	-1964,1780,1780,-3539,1780,-3170
chr8:22843195-22844358	chr8	+	22843320	22844359	True	NM_001160037,NM_001160036,NM_144962	chr8,chr8,chr8	+,+,-	RHOBTB2,RHOBTB2,PEBP4	9001,570,-57899
chr3:98496354-98497862	chr3	+	98497019	98497895	True	NM_006100,NM_080927	chr3,chr3	+,-	ST3GAL6,DCBLD2	-45498,122688
chr5:38416675-38417175	chr5	+	38416716	38417122	True	NM_001127671,NM_182799	chr5,chr5	-,+	LIFR,EGFLAM	139676,-13117
chrX:9728852-9729907	chrX	+	9728852	9729872	True	NM_001649,NM_000273	chrX,chrX	+,-	SHROOM2,GPR143	24623,4183
chr16:19567177-19568798	chr16	+	19567192	19568708	True	NM_020314,NM_016641	chr16,chr16	+,-	C16orf62,GDE1	-506,-33742
chr2:55660821-55662791	chr2	+	55660989	55662694	True	NM_080667,NM_018084	chr2,chr2	+,-	CCDC104,CCDC88A	84045,-13932
chr17:41562050-41562637	chr17	+	41562292	41562556	True	NM_001986,NM_004941	chr17,chr17	-,+	ETV4,DHX8	60799,-1010
chr9:131844038-131844329	chr9	+	131844065	131844375	True	NM_000755,NM_020438,NM_001135917	chr9,chr9,chr9	-,+,+	CRAT,DOLPP1,DOLPP1	28745,-733,-733
chr22:32438551-32439045	chr22	+	32438702	32438846	True	NM_015372,NM_000343	chr22,chr22	-,+	C22orf24,SLC5A1	-97366,172
chrX:119385746-119387398	chrX	+	119385793	119387411	True	NM_006777,NR_027131,NM_001184742	chrX,chrX,chrX	+,-,+	ZBTB33,NKAPP1,ZBTB33	-1237,-6671,-1234
chr11:1413313-1413813	chr11	+	1413336	1413830	True	NM_019009,NM_003957	chr11,chr11	-,+	TOLLIP,BRSK2	-82444,-2258
chr10:30028317-30029443	chr10	+	30028353	30029403	True	NM_003174,NR_003930	chr10,chr10	-,+	SVIL,LOC387647	-3623,-329903
chr4:54248499-54248975	chr4	+	54248568	54248939	True	NM_001134938,NM_001134937,NM_030917,NM_152540	chr4,chr4,chr4,chr4	+,+,+,-	FIP1L1,FIP1L1,FIP1L1,SCFD2	-4800,-4800,-4800,-16326
chr20:30697808-30698746	chr20	+	30698019	30698725	True	NR_002781,NM_014742	chr20,chr20	-,+	TSPY26P,TM9SF4	79489,-761
chr5:107008626-107009034	chr5	+	107008654	107009058	True	NM_005246,NM_001962	chr5,chr5	+,-	FER,EFNA5	1074464,-2058
chr2:201679013-201680126	chr2	+	201679042	201680165	True	NM_001162407,NM_014670	chr2,chr2	-,+	CLK1,BZW1	49171,-2446
chr3:148932752-148934483	chr3	+	148932864	148934294	True	NM_000096,NM_032383	chr3,chr3	-,+	CP,HPS3	5602,-85552
chr11:93276787-93277544	chr11	+	93276934	93277542	True	NM_033395,NM_020179	chr11,chr11	+,-	KIAA1731,C11orf75	117273,-388
chr16:2478351-2478666	chr16	+	2478525	2478611	True	NM_001761,NM_001089	chr16,chr16	+,-	CCNF,ABCA3	783,-87778
chr5:39363058-39364551	chr5	+	39363206	39364410	True	NM_001737,NM_003999	chr5,chr5	-,+	C9,OSMR	307,-517156
chr19:5623292-5623492	chr19	+	5623342	5623404	True	NM_001201338,NM_001201339,NR_037699,NM_014649,NM_002967,NM_001201340	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,-,+,+	SAFB,SAFB,SAFB,SAFB2,SAFB,SAFB	-347,-347,-347,-404,-347,-347
chrX:114468831-114470035	chrX	+	114468844	114470080	True	NM_001145346,NM_020871	chrX,chrX	+,-	RBMXL3,LRCH2	-44932,-209
chr3:66025166-66025386	chr3	+	66025184	66025319	True	NM_173471,NM_015520,NM_001033057,NM_004742	chr3,chr3,chr3,chr3	+,-,-,-	SLC25A26,MAGI1,MAGI1,MAGI1	93965,-675,-675,-675
chr19:52676918-52677398	chr19	+	52676992	52677058	True	NM_001102657,NM_014225	chr19,chr19	-,+	ZNF836,PPP2R1A	-2096,15996
chrX:56277256-56278054	chrX	+	56277263	56277796	True	NM_001159296,NR_002308	chrX,chrX	+,-	KLF8,LOC442454	-18451,486280
chr17:41473248-41474530	chr17	+	41473458	41474292	True	NR_027412,NM_001661,NR_027413	chr17,chr17,chr17	-,+,-	LOC100130581,ARL4D,LOC100130581	-7192,2060,-7192
chr5:173987064-173988766	chr5	+	173987504	173988693	True	NM_002449,NM_000794	chr5,chr5	+,-	MSX2,DRD1	162881,882533
chr8:127794850-127795097	chr8	+	127794972	127795126	True	NM_001159542,NM_174911	chr8,chr8	+,-	POU5F1B,FAM84B	632730,-224261
chr20:23066430-23066773	chr20	+	23066482	23066724	True	NM_001052,NM_012072	chr20,chr20	+,-	SSTR4,CD93	-50476,303
chr2:34090812-34092184	chr2	+	34090991	34091892	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-352100,-137707
chr20:33289026-33289981	chr20	+	33289235	33289955	True	NM_080476,NM_021202	chr20,chr20	-,+	PIGU,TP53INP2	-24146,2192
chr10:2005876-2006775	chr10	+	2005959	2006664	True	NR_033387,NM_018702	chr10,chr10	+,-	NCRNA00168,ADARB2	-437185,-226241
chr19:49577812-49578840	chr19	+	49578327	49578833	True	NM_031886,NM_003089	chr19,chr19	-,+	KCNA7,SNRNP70	-2129,9631
chr7:75131382-75132160	chr7	+	75131781	75132013	True	NM_001099415,NM_001099435	chr7,chr7	-,+	POM121C,SPDYE5	-16213,-7542
chr8:17570877-17571106	chr8	+	17570876	17571109	True	NM_001001931,NM_006207,NM_001166393	chr8,chr8,chr8	-,+,-	MTUS1,PDGFRL,MTUS1	8672,-136989,9026
chr1:32717003-32718885	chr1	+	32717142	32718622	True	NM_032648,NR_026850,NM_005356	chr1,chr1,chr1	+,-,+	FAM167B,MTMR9LP,LCK	-4375,-9831,-353
chr4:174452504-174452833	chr4	+	174452619	174452851	True	NR_003679,NM_021973	chr4,chr4	+,-	NBLA00301,HAND2	-1061,-1241
chr17:59475371-59475686	chr17	+	59475411	59475697	True	NM_199290,NM_005994	chr17,chr17	-,+	NACA2,TBX2	192916,1559
chr9:103959069-103959593	chr9	+	103959192	103959605	True	NM_001127610,NM_017753	chr9,chr9	-,+	BAAT,LPPR1	186247,-11938
chr14:20018956-20020192	chr22	+	16286756	16287881	False	NR_001591,NM_001136213	chr22,chr22	+,-	psiTPTE22,POTEH	794919,106
chr14:20018956-20020192	chr14	+	20019202	20020216	True	NM_001145442,NM_172194	chr14,chr14	-,+	POTEM,OR4Q3	106,195370
chr14:20018956-20020192	chr14	-	19553420	19554208	False	NM_001145442,NR_027480,NM_001005356	chr14,chr14,chr14	-,+,+	POTEM,POTEG,POTEG	466124,-106,-106
chr14:70248598-70249148	chr14	+	70248600	70249186	True	NR_029378,NM_006925	chr14,chr14	-,+	LOC100289511,SRSF5	-14170,-14817
chrX:17755988-17756398	chrX	+	17755990	17756250	True	NM_006746,NM_001037540,NR_033348,NM_001037535,NM_001037536	chrX,chrX,chrX,chrX,chrX	+,+,-,+,+	SCML1,SCML1,RAI2,SCML1,SCML1	-449,-449,122747,-449,-449
chr22:24322965-24323256	chr22	+	24323071	24323241	True	NM_001355,NM_000854,NM_001084392	chr22,chr22,chr22	-,+,-	DDT,GSTT2,DDT	-1052,-808,-6391
chr22:24322965-24323256	chr22	-	24302531	24302581	False	NM_000854,NM_001080843,NM_001084393	chr22,chr22,chr22	-,-,+	GSTT2,GSTT2B,DDTL	862,837,6444
chr7:20826318-20826545	chr7	+	20826344	20826546	True	NM_182700,NR_026673,NM_198956	chr7,chr7,chr7	-,+,-	SP8,RPL23P8,SP8	12,40370,12
chr7:99525901-99526402	chr7	+	99525903	99526383	True	NR_036679,NM_181538,NM_033017,NM_033091	chr7,chr7,chr7,chr7	+,-,-,-	AZGP1P1,GJC3,TRIM4,TRIM4	52001,910,-8680,-8680
chr16:28874545-28874770	chr16	+	28874586	28874818	True	NM_001145812,NM_001145797,NM_001145796,NM_001145795,NM_015503,NM_003321	chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,-	SH2B1,SH2B1,SH2B1,SH2B1,SH2B1,TUFM	477,259,259,259,495,-16857
chr7:12250208-12250830	chr7	+	12250209	12250781	True	NM_018374,NM_001135924,NM_001134232	chr7,chr7,chr7	+,-,+	TMEM106B,VWDE,TMEM106B	66,193121,66
chr19:1068649-1069293	chr19	+	1068704	1069336	True	NM_002695,NM_012292	chr19,chr19	-,+	POLR2E,HMHA1	26105,-1581
chr22:46688849-46689278	chr22	+	46688873	46689274	True	NR_024009,NM_016426	chr22,chr22	-,+	CN5H6.4,GTSE1	3340,3363
chr7:72443006-72443304	chr7	+	72443135	72443203	True	NR_033323,NR_003602	chr7,chr7	-,+	NSUN5P2,LOC541473	-17833,-2994
chr7:72443006-72443304	chr7	+	72787787	72787841	False	NM_003602,NM_178125	chr7,chr7	+,-	FKBP6,TRIM50	-45538,-45702
chr7:72443006-72443304	chr7	-	75021693	75021761	False	NM_198853,NM_198924,NR_003614	chr7,chr7,chr7	+,+,-	TRIM74,TRIM73,PMS2L2	3141,3141,-33478
chr11:125462805-125463179	chr11	+	125462810	125463068	True	NM_001612,NM_152713	chr11,chr11	-,+	ACRV1,STT3A	87775,-122
chr20:35583121-35584284	chr20	+	35583439	35584102	True	NM_015474,NM_080628	chr20,chr20	-,+	SAMHD1,C20orf118	-3193,-78920
chr19:7561878-7562349	chr19	+	7561884	7562345	True	NM_198534,NM_080662	chr19,chr19	+,-	C19orf45,PEX11G	99,-7979
chr3:57098188-57099202	chr3	+	57098832	57099207	True	NM_181727,NM_001128615	chr3,chr3	+,-	SPATA12,ARHGEF3	-4428,14179
chr19:54057232-54057708	chr19	+	54057360	54057674	True	NM_001079907,NR_002938	chr19,chr19	+,-	ZNF331,LOC284379	886,49127
chr5:56471820-56472498	chr5	+	56471913	56472540	True	NM_001203246,NM_001127235,NM_022913,NM_152622	chr5,chr5,chr5,chr5	+,+,+,-	GPBP1,GPBP1,GPBP1,MIER3	-2196,-696,-2196,-223959
chr1:143916036-143916573	chr1	+	143916141	143916533	True	NM_207418,NR_034178	chr1,chr1	-,+	FAM72D,SRGAP2P2	-2998,-444
chr1:143916036-143916573	chr1	-	120835584	120835976	False	NM_001004340,NM_001100910	chr1,chr1	-,+	FCGR1B,FAM72B	100018,3028
chr1:143916036-143916573	chr1	-	206135067	206135459	False	NM_001123168,NM_001007544	chr1,chr1	+,-	FAM72A,C1orf186	3451,153238
chr10:28965388-28965652	chr10	+	28965395	28965680	True	NR_033805,NM_012342	chr10,chr10	-,+	LOC220906,BAMBI	-144112,743
chr16:67227040-67227244	chr16	+	67227039	67227187	True	NM_024712,NM_001950,NM_178516,NR_029887,NM_001040715	chr16,chr16,chr16,chr16,chr16	+,+,-,-,-	ELMO3,E2F4,EXOC3L1,MIR328,KIAA0895L	5840,-1022,-2932,9161,-9156
chrX:99889789-99891258	chrX	+	99890046	99891221	True	NM_003270,NM_014467	chrX,chrX	-,+	TSPAN6,SRPX2	623,7941
chr8:103250508-103250787	chr8	+	103250603	103250697	True	NM_015713,NM_001172477,NM_001172478,NM_024410	chr8,chr8,chr8,chr8	-,-,-,+	RRM2B,RRM2B,RRM2B,ODF1	699,412,699,313150
chr20:49349883-49350884	chr20	+	49349981	49350893	True	NM_032521,NM_080829	chr20,chr20	+,-	PARD6B,FAM65C	-1958,-96555
chr15:71406482-71407392	chr15	+	71406499	71407162	True	NM_024817,NM_001102658	chr15,chr15	+,-	THSD4,CT62	26625,728
chr20:5894575-5894901	chr20	+	5894633	5894943	True	NM_001819,NM_015939	chr20,chr20	+,-	CHGB,TRMT6	-2722,36289
chr1:236684848-236686807	chr1	+	236685230	236686722	True	NM_201545,NM_201544,NM_201543,NR_034040,NM_006499	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	LGALS8,LGALS8,LGALS8,LOC100287902,LGALS8	-3770,304,16,1136,16
chr19:12950694-12951225	chr19	+	12950739	12951045	True	NM_001080997,NM_014975,NM_031429	chr19,chr19,chr19	-,+,-	RTBDN,MAST1,RTBDN	-9532,-1538,-4509
chr6:109776294-109776545	chr6	+	109776374	109776594	True	NM_001159291,NM_022765,NM_003080	chr6,chr6,chr6	-,-,+	MICAL1,MICAL1,SMPD2	646,646,-14494
chr3:14688043-14688290	chr3	+	14688063	14688325	True	NM_016474,NM_001080423	chr3,chr3	+,-	C3orf19,GRIP2	4927,-104475
chr1:36270668-36270899	chr1	+	36270668	36270733	True	NM_017629,NM_022111	chr1,chr1	+,-	EIF2C4,CLSPN	3094,-35117
chr4:48025151-48026454	chr4	+	48025329	48025771	True	NM_000087,NM_207330	chr4,chr4	-,+	CNGA1,NIPAL1	-10368,-6596
chr14:42077703-42078586	chr14	+	42077750	42078634	True	NM_152447,NM_203301	chr14,chr14	+,-	LRFN5,FBXO33	-1037,-2176046
chr10:96479490-96480861	chr10	+	96479846	96480612	True	NM_000770,NM_001128925	chr10,chr10	-,+	CYP2C8,CYP2C18	348692,-36659
chr5:126366982-126368188	chr5	+	126367077	126367789	True	NM_001198557,NM_178450	chr5,chr5	+,-	LMNB1,MARCH3	-254283,-637
chr15:77111993-77113991	chr15	+	77113309	77113662	True	NM_002902,NM_001145923	chr15,chr15	+,-	RCN2,SCAPER	110299,40684
chr14:69447587-69448647	chr14	+	69447732	69448636	True	NM_001130004,NM_001193360,NM_001130005,NM_001102	chr14,chr14,chr14,chr14	-,+,-,-	ACTN1,EXD2,ACTN1,ACTN1	-1649,209557,-1649,-1649
chr16:56898726-56899004	chr16	+	56898741	56898885	True	NM_000339,NM_001126108,NR_029680,NM_001126107,NM_005950	chr16,chr16,chr16,chr16,chr16	+,+,+,+,-	SLC12A3,SLC12A3,MIR138-2,SLC12A3,MT1G	233,233,-6362,233,-196764
chr1:63157253-63157806	chr1	+	63157318	63157664	True	NM_033407,NM_032852	chr1,chr1	-,+	DOCK7,ATG4C	-3349,92112
chr7:38664086-38664719	chr7	+	38664330	38664762	True	NM_001635,NM_139316,NM_001166018	chr7,chr7,chr7	-,-,+	AMPH,AMPH,POU6F2	6455,6455,352846
chr19:1566457-1566717	chr19	+	1566701	1566765	True	NR_026557,NM_203304,NM_001174118	chr19,chr19,chr19	+,-,-	PLK5P,MEX3D,MEX3D	-42674,1342,1342
chr22:30784660-30785728	chr22	+	30784770	30785738	True	NM_033382,NM_001204204,NM_001017981,NM_012429	chr22,chr22,chr22,chr22	+,+,-,+	SEC14L2,SEC14L2,RNF215,SEC14L2	7191,7191,-1468,7191
chr13:92090795-92091401	chr13	+	92091313	92091427	True	NR_027039,NM_004466	chr13,chr13	-,+	LOC144776,GPC5	-512462,-40429
chr1:28283475-28284959	chr1	+	28283795	28284841	True	NM_002946,NM_018053	chr1,chr1	-,+	RPA2,XKR8	-42559,1662
chr20:39766676-39766934	chr20	+	39766726	39766942	True	NM_002660,NM_182811,NM_015035	chr20,chr20,chr20	+,+,-	PLCG1,PLCG1,ZHX3	-616,-616,161847
chr22:42370233-42370521	chr22	+	42370238	42370311	True	NM_024053,NM_145733,NM_019106	chr22,chr22,chr22	-,+,+	CENPM,SEPT3,SEPT3	-27090,2619,2619
chr10:102089433-102089880	chr10	+	102089451	102089665	True	NM_016112,NM_005063	chr10,chr10	-,+	PKD2L1,SCD	628,17106
chr1:9188645-9188951	chr1	+	9188694	9188938	True	NM_004285,NM_024980	chr1,chr1	+,-	H6PD,GPR157	105924,341
chr11:46939129-46939357	chr11	+	46939159	46939405	True	NM_001003676,NM_002334	chr11,chr11	+,-	C11orf49,LRP4	18845,818
chr8:11202151-11203089	chr8	+	11202178	11203046	True	NR_001578,NM_053279	chr8,chr8	+,-	TDH,FAM167A	-5083,121280
chr1:16063954-16064781	chr1	+	16064109	16064751	True	NM_001089591,NM_001013641,NM_207348	chr1,chr1,chr1	-,+,+	UQCRHL,TMEM82,SLC25A34	69493,4165,-1351
chr20:35580088-35580363	chr20	+	35580138	35580314	True	NM_015474,NM_080628	chr20,chr20	-,+	SAMHD1,C20orf118	2,-75619
chr19:30093511-30093821	chr19	+	30093614	30093738	True	NM_001031726,NR_027368,NM_006627	chr19,chr19,chr19	-,+,+	C19orf12,POP4,POP4	112275,3431,3431
chr4:3769876-3770377	chr4	+	3770142	3770398	True	NM_000683,NR_034136	chr4,chr4	+,-	ADRA2C,LOC100133461	-1904,-90560
chr15:30396342-30396616	chr15	+	30396438	30396518	True	NR_026859,NM_175610	chr15,chr15	+,-	FAM7A3,TJP1	-554,-281732
chr2:219846608-219846864	chr2	+	219846722	219846910	True	NR_015390,NM_017521,NR_024385	chr2,chr2,chr2	+,-,+	LOC151300,FEV,LOC151300	-5767,3519,-5767
chr3:121377204-121378094	chr3	+	121377372	121378068	True	NM_005335,NM_016298	chr3,chr3	-,+	HCLS1,FBXO40	1773,-65253
chr19:55852454-55852697	chr19	+	55852463	55852571	True	NM_144613,NM_032701	chr19,chr19	-,+	COX6B2,SUV420H2	13661,-1293
chr6:167650104-167650925	chr6	+	167650107	167650853	True	NM_005299,NM_001143947	chr6,chr6	-,+	GPR31,UNC93A	-78788,53949
chr6:167650104-167650925	chr6	-	167687185	167687235	False	NM_004610,NM_001143947	chr6,chr6	-,+	TCP10,UNC93A	110813,17567
chr6:111197203-111197452	chr6	+	111197321	111197439	True	NM_001634,NM_001033059,NM_015076	chr6,chr6,chr6	+,+,-	AMD1,AMD1,CDK19	-1385,-1384,-60909
chr10:123356203-123356452	chr10	+	123356268	123356484	True	NM_000141,NM_022970,NM_001144916,NM_001144917,NM_001144914,NM_001144915,NM_206861,NM_001144913,NM_001144918,NM_001144919	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,-,-,+,-,-,-	FGFR2,FGFR2,FGFR2,FGFR2,FGFR2,FGFR2,TACC2,FGFR2,FGFR2,FGFR2	1538,1538,-2496,1538,-2787,-109,392204,-2787,1538,1538
chr3:132146274-132147257	chr3	+	132146455	132147283	True	NM_032169,NM_015268	chr3,chr3	-,+	ACAD11,DNAJC13	231742,-9965
chr12:53895936-53896287	chr12	+	53896094	53896327	True	NM_003717,NM_004178,NM_134323,NM_001193511,NM_134324,NM_006301	chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,-,+,-	NPFF,TARBP2,TARBP2,MAP3K12,TARBP2,MAP3K12	5145,-1440,-1440,-2650,-768,-2650
chr1:161360333-161361279	chr1	+	161360436	161360981	True	NM_001013625,NM_003001	chr1,chr1	-,+	C1orf192,SDHC	-22772,-76321
chr1:203275007-203275240	chr1	+	203275163	203275245	True	NR_034151,NM_006763,NR_034150	chr1,chr1,chr1	-,+,-	LOC730227,BTG2,LOC730227	-710,-550,-710
chr9:88873130-88873559	chr9	+	88873289	88873594	True	NM_024635,NM_001010907	chr9,chr9	+,-	NAA35,C9orf153	-317290,984
chr1:247170527-247170951	chr1	+	247170815	247170945	True	NR_015422,NM_001204221,NR_037892,NM_020394	chr1,chr1,chr1,chr1	+,-,-,-	LOC149134,ZNF695,ZNF695,ZNF695	-217947,500,500,500
chr15:78915655-78917153	chr15	+	78915870	78917098	True	NM_001166694,NM_000743,NM_000745	chr15,chr15,chr15	-,-,+	CHRNA3,CHRNA3,CHRNA5	-2233,-2233,-58062
chr17:30454822-30455779	chr17	+	30454853	30455174	True	NM_001033566,NR_002222	chr17,chr17	+,-	RHOT1,ARGFXP2	14298,23477
chr7:150268723-150269273	chr7	+	150268938	150269303	True	NM_024711,NM_018326	chr7,chr7	-,+	GIMAP6,GIMAP4	60428,-4531
chr11:33725682-33726238	chr11	+	33725703	33726254	True	NM_012194,NM_001166692	chr11,chr11	+,-	C11orf41,C11orf91	-161877,-3417
chr1:227127518-227127741	chr1	+	227127643	227127721	True	NM_020247,NM_002221	chr1,chr1	+,-	ADCK3,ITPKB	216,-200767
chrX:119253485-119254253	chrX	+	119253520	119254256	True	NM_139282,NM_032498	chrX,chrX	-,+	RHOXF1,RHOXF2	-3673,38210
chr14:77966859-77967496	chr14	+	77966882	77967427	True	NM_182509,NM_012111,NM_199296	chr14,chr14,chr14	-,+,-	ISM2,AHSA1,ISM2	-1672,-42561,-1672
chr19:15995821-15996303	chr19	+	15996010	15996322	True	NM_001082,NR_015379	chr19,chr19	-,+	CYP4F2,UCA1	12612,-56314
chr12:64215914-64216719	chr12	+	64216036	64216681	True	NM_020762,NM_173812	chr12,chr12	+,-	SRGAP1,DPY19L2	21859,-153682
chr1:32710193-32710658	chr1	+	32710303	32710364	True	NM_032648,NR_026850,NM_005356	chr1,chr1,chr1	+,-,+	FAM167B,MTMR9LP,LCK	2453,-2992,6475
chrX:136113173-136113874	chrX	+	136113179	136113731	True	NM_054021,NM_000074	chrX,chrX	-,+	GPR101,CD40LG	152,-382894
chr19:3881789-3882229	chr19	+	3881791	3881993	True	NM_001145640,NM_033064	chr19,chr19	-,+	ZFR2,ATCAY	-12764,-1224
chr2:183989073-183989418	chr2	+	183989141	183989429	True	NM_138285,NM_205842	chr2,chr2	+,-	NUP35,NCKAP1	-110,-85912
chr1:213224858-213225344	chr1	+	213224983	213225373	True	NM_012424,NM_144567,NM_001136138	chr1,chr1,chr1	+,-,+	RPS6KC1,ANGEL2,RPS6KC1	-446,-35815,-446
chr1:156053629-156054209	chr1	+	156053662	156054100	True	NM_001093725,NM_020387	chr1,chr1	-,+	MEX3A,RAB25	-1873,-22748
chr20:61475106-61476106	chr20	+	61475147	61475715	True	NM_006602,NM_080750	chr20,chr20	-,+	TCFL5,DPH3P1	17450,760
chr12:53171447-53172156	chr12	+	53171572	53172153	True	NM_199187,NM_015848	chr12,chr12	+,-	KRT18,KRT76	170501,-443
chr18:52499932-52500547	chr18	+	52499973	52500359	True	NM_004163,NM_001143829	chr18,chr18	+,-	RAB27B,CCDC68	-4184,124970
chr8:97507230-97507469	chr8	+	97507297	97507517	True	NM_015942,NM_002998	chr8,chr8	-,+	MTERFD1,SDC2	-233501,-1466
chr11:636560-636916	chr11	+	636590	636962	True	NM_000797,NM_021920	chr11,chr11	+,-	DRD4,SCT	342,-9417
chr12:27299781-27300205	chr12	+	27299780	27300029	True	NM_001080406,NM_015000	chr12,chr12	-,+	C12orf71,STK38L	-64325,97048
chr11:5662850-5663492	chr11	+	5662873	5663327	True	NM_130390,NM_033034,NR_002777	chr11,chr11,chr11	+,-,+	TRIM34,TRIM5,TRIM78P	-9439,43074,1084
chr16:476790-477588	chr16	+	476848	477626	True	NM_014700,NM_021259	chr16,chr16	+,-	RAB11FIP3,TMEM8A	-1231,-44898
chr9:136221667-136221960	chr9	+	136221731	136222007	True	NM_133640,NM_000972,NM_181491,NR_000017,NR_002447,NM_003172,NM_017503,NR_002448,NR_000016	chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,+,-,+,+,-,+,+,+	MED22,RPL7A,MED22,SNORD36B,SNORD24,SURF1,SURF2,SNORD36A,SNORD36C	-6759,-6713,-6759,-4833,-5531,1404,1413,-4471,-4081
chr17:15635073-15635374	chr17	+	15635098	15635370	True	NM_006470,NM_178571	chr17,chr17	-,+	TRIM16,TBC1D26	-48905,220
chr17:15635073-15635374	chr17	-	18548029	18548202	False	NM_001037330,NM_001039397	chr17,chr17	+,-	TRIM16L,TBC1D28	77199,-289
chr5:32446242-32446810	chr5	+	32446426	32446839	True	NM_016107,NM_006713	chr5,chr5	-,+	ZFR,SUB1	-1582,138765
chr22:36653287-36653541	chr22	+	36653348	36653582	True	NM_145637,NM_145343,NM_001136540,NM_001136541,NM_003661	chr22,chr22,chr22,chr22,chr22	-,+,+,+,+	APOL2,APOL1,APOL1,APOL1,APOL1	-17348,-4282,-4282,-4282,-4282
chr6:42120020-42121620	chr6	+	42120134	42121346	True	NM_001164446,NM_000409	chr6,chr6	-,+	C6orf132,GUCA1A	-9419,1797
chr8:81455456-81456331	chr8	+	81455527	81456325	True	NM_001033723,NM_023929	chr8,chr8	-,+	ZNF704,ZBTB10	330741,-57130
chr2:158452254-158453498	chr2	+	158452258	158453436	True	NM_014568,NM_001111031	chr2,chr2	+,-	GALNT5,ACVR1C	-337969,686
chr2:74574078-74575651	chr2	+	74574280	74575349	True	NR_024463,NM_133478	chr2,chr2	+,-	LOC100189589,SLC4A5	37495,-3746
chr10:93367763-93368737	chr10	+	93367853	93368771	True	NM_025235,NR_024467	chr10,chr10	+,-	TNKS2,LOC100188947	189379,2496
chr2:215977514-215978989	chr2	+	215977810	215978338	True	NM_173076,NM_004044	chr2,chr2	-,+	ABCA12,ATIC	24863,198340
chr16:72044890-72046077	chr16	+	72045049	72046041	True	NM_001361,NM_181536	chr16,chr16	+,-	DHODH,PKD1L3	-2461,-11172
chr20:55041681-55041927	chr20	+	55041693	55041926	True	NM_080615,NM_016407	chr20,chr20	-,+	GCNT7,C20orf43	59118,1720
chr4:89083287-89084876	chr4	+	89083625	89084846	True	NM_000297,NM_004827	chr4,chr4	+,-	PKD2,ABCG2	-154883,-3614
chr6:56822885-56823638	chr6	+	56822905	56823669	True	NM_152731,NM_183227	chr6,chr6	+,-	BEND6,RAB23	-3183,262638
chr1:156864351-156864564	chr1	+	156864353	156864421	True	NM_014215,NM_001080471	chr1,chr1	-,+	INSRR,PEAR1	-35641,-881
chr16:66995235-66995625	chr16	+	66995308	66995474	True	NM_001185177,NM_001185176,NM_024922,NR_024525	chr16,chr16,chr16,chr16	+,+,+,-	CES3,CES3,CES3,FAM96B	-227,5903,-227,-26988
chr7:23283422-23284846	chr7	+	23283608	23284515	True	NM_006547,NM_001005340,NM_002510	chr7,chr7,chr7	-,+,+	IGF2BP3,GPNMB,GPNMB	225530,1800,1800
chr8:59334527-59336291	chr8	+	59334732	59335724	True	NM_000780,NM_001077619	chr8,chr8	-,+	CYP7A1,UBXN2B	77046,-10961
chrX:118287658-118288111	chrX	+	118287773	118288147	True	NM_006667,NM_020721	chrX,chrX	+,-	PGRMC1,KIAA1210	82063,-3231
chr16:82204763-82205078	chr16	+	82204910	82205061	True	NM_005792,NM_002153	chr16,chr16	-,+	MPHOSPH6,HSD17B2	-1081,-136103
chr17:66572002-66573180	chr17	+	66572187	66573209	True	NR_027751,NM_212472	chr17,chr17	-,+	FAM20A,PRKAR1A	-17619,-63695
chr4:76901125-76902031	chr4	+	76901277	76901925	True	NM_018115,NM_001130017	chr4,chr4	-,+	SDAD1,ART3	10238,30411
chr3:77145894-77147270	chr3	+	77145952	77147255	True	NM_001128929,NM_001128223	chr3,chr3	+,-	ROBO2,ZNF717	-27,-1311697
chr3:11621865-11622896	chr3	+	11622015	11622913	True	NM_006395,NM_001128220	chr3,chr3	+,-	ATG7,VGLL4	-308064,973
chr6:97021488-97023016	chr6	+	97021967	97023040	True	NM_001143957,NM_020482	chr6,chr6	-,+	GPR63,FHL5	262369,-11603
chr22:35554652-35555565	chr22	+	35554660	35555609	True	NM_001008494,NM_005368	chr22,chr22	+,-	ISX,MB	-92581,457833
chr17:47755632-47756287	chr17	+	47755732	47756031	True	NM_001007226,NM_001007227,NM_001007230,NM_003563,NM_001007228,NM_001007229,NM_007225	chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,-,+	SPOP,SPOP,SPOP,SPOP,SPOP,SPOP,NXPH3	-207,-207,-207,-207,-207,-207,-102485
chr7:143319546-143319939	chr7	+	143319552	143319760	True	NM_178561,NM_001130025,NM_173678	chr7,chr7,chr7	-,+,+	CTAGE6P,FAM115C,FAM115C	135133,-1558,-1061
chr7:143319546-143319939	chr7	-	143532070	143532293	False	NR_015421,NM_001004685	chr7,chr7	-,+	LOC154761,OR2F2	1567,100032
chr7:143319546-143319939	chr7	+	143398741	143398979	False	NM_178561,NM_001130026	chr7,chr7	-,+	CTAGE6P,FAM115C	55914,13959
chr11:65265865-65266219	chr11	+	65265895	65266198	True	NR_002819,NM_001130144	chr11,chr11	+,-	MALAT1,LTBP3	-714,59556
chr1:21113927-21114275	chr1	+	21114036	21114304	True	NM_016287,NM_032409	chr1,chr1	-,+	HP1BP3,PINK1	-855,-154139
chr12:109580462-109581370	chr12	+	109580721	109581366	True	NM_001093,NM_001205180	chr12,chr12	+,-	ACACB,ALKBH2	-3577,-49428
chr4:25865672-25865928	chr4	+	25865681	25865839	True	NM_001145432,NM_015187	chr4,chr4	+,-	C4orf52,SEL1L3	49974,-1071
chr11:46401977-46402208	chr11	+	46402036	46402257	True	NM_001012333,NM_002391,NM_001012334,NM_000741	chr11,chr11,chr11,chr11	+,+,+,-	MDK,MDK,MDK,CHRM4	1045,961,360,5900
chr14:74414010-74415712	chr14	+	74414120	74415445	True	NM_182480,NM_152445,NM_182476	chr14,chr14,chr14	+,-,+	COQ6,FAM161B,COQ6	1197,1441,1510
chr2:101769168-101770009	chr2	+	101769181	101770049	True	NM_001102426,NM_017546	chr2,chr2	-,+	TBC1D8,C2orf29	-1335,99295
chr2:160910289-160910710	chr2	+	160910316	160910632	True	NM_001195641,NM_022826,NM_007366,NM_001007267	chr2,chr2,chr2,chr2	-,+,-,-	PLA2R1,MARCH7,PLA2R1,PLA2R1	8544,-341357,8544,8544
chr2:219696693-219697318	chr2	+	219696770	219697356	True	NM_017431,NM_006522	chr2,chr2	-,+	PRKAG3,WNT6	-258,27189
chr11:93862443-93862694	chr11	+	93862474	93862676	True	NM_015368,NM_016540	chr11,chr11	+,-	PANX1,GPR83	-431,271959
chr15:83216137-83216806	chr15	+	83216333	83216746	True	NM_001199057,NR_033579,NM_001021	chr15,chr15,chr15	-,+,-	LOC100505503,LOC440297,RPS17	-7125,-86354,-7125
chr15:22894992-22895942	chr15	+	22894992	22895856	True	NM_014608,NM_001008860	chr15,chr15	+,-	CYFIP1,NIPA2	-2368,138627
chr17:8287761-8288048	chr17	+	8287785	8288027	True	NM_000987,NM_153007	chr17,chr17	-,+	RPL26,ODF4	-1220,-44648
chr7:143534549-143535169	chr7	+	143534635	143535213	True	NR_015421,NM_001004685	chr7,chr7	-,+	LOC154761,OR2F2	-825,97112
chr7:143534549-143535169	chr7	-	143316632	143317210	False	NM_178561,NM_001130025,NM_173678	chr7,chr7,chr7	-,+,+	CTAGE6P,FAM115C,FAM115C	137683,834,1331
chrX:66825506-66827030	chrX	+	66825570	66826801	True	NM_001011645,NM_002547	chrX,chrX	+,-	AR,OPHN1	-36938,826557
chr3:111696670-111697289	chr3	+	111696738	111697178	True	NM_001190259,NM_018394	chr3,chr3	-,+	GCET2,ABHD10	155035,649
chr17:16321241-16321769	chr17	+	16321395	16321725	True	NM_016113,NM_181716	chr17,chr17	+,-	TRPV2,CENPV	-2592,-64583
chr22:35797106-35797500	chr22	+	35797121	35797523	True	NM_005368,NM_006739	chr22,chr22	-,+	MB,MCM5	215911,-1057
chr16:84736521-84736754	chr16	+	84736675	84736782	True	NM_005153,NM_021149	chr16,chr16	+,-	USP10,COTL1	-3178,-85006
chr7:97880254-97880775	chr7	+	97880342	97880806	True	NM_015395,NM_015379	chr7,chr7	-,+	TECPR1,BRI3	712,30172
chr15:41622894-41623636	chr15	+	41623002	41623571	True	NM_007280,NM_018454,NM_001129897,NM_016359	chr15,chr15,chr15,chr15	-,+,+,+	OIP5,NUSAP1,NUSAP1,NUSAP1	1305,1354,1354,1354
chr11:64611233-64611736	chr11	+	64611362	64611644	True	NM_017525,NM_006244	chr11,chr11	-,+	CDC42BPG,PPP2R5B	447,80498
chr16:792278-793234	chr16	+	792285	792605	True	NM_032304,NM_022493	chr16,chr16	+,-	HAGHL,NARFL	-15070,-1288
chrX:49019210-49019738	chrX	+	49019329	49019407	True	NM_002668,NM_006150,NM_001099682,NM_001099681,NM_024859,NM_001099680	chrX,chrX,chrX,chrX,chrX,chrX	+,-,+,+,+,+	PLP2,PRICKLE3,MAGIX,MAGIX,MAGIX,MAGIX	8776,23419,-199,-199,-199,862
chrX:49019210-49019738	chrX	-	49013509	49013587	False	NM_006150,NM_001099682,NM_001099681,NM_024859,NM_001099680	chrX,chrX,chrX,chrX,chrX	-,+,+,+,+	PRICKLE3,MAGIX,MAGIX,MAGIX,MAGIX	29239,5593,5593,5593,6682
chr14:35450240-35451280	chr14	+	35450423	35451310	True	NM_182648,NM_003136,NM_001146282	chr14,chr14,chr14	-,+,+	BAZ1A,SRP54,SRP54	-105570,793,793
chr21:46363472-46364323	chr21	+	46363496	46364199	True	NM_058190,NR_027128,NR_027129	chr21,chr21,chr21	+,-,-	C21orf70,C21orf67,C21orf67	-3592,-3668,-3668
chr11:76479545-76480426	chr11	+	76479728	76480307	True	NM_015516,NR_024042	chr11,chr11	+,-	TSKU,GUCY2E	13977,-46895
chr10:102747462-102748428	chr10	+	102747572	102748456	True	NM_001163812,NM_001163813,NM_001163814,NM_032112,NM_021830,NM_176794,NM_176793,NM_176792,NM_032429	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,-,+,-,-,-,+	C10orf2,C10orf2,C10orf2,MRPL43,C10orf2,MRPL43,MRPL43,MRPL43,LZTS2	-330,-330,-330,-300,-330,-300,-300,-300,8407
chr3:122400507-122401298	chr3	+	122400515	122401333	True	NM_024610,NM_017554	chr3,chr3	-,+	HSPBAP1,PARP14	111367,-894
chr1:161391248-161391890	chr1	+	161391386	161391847	True	NM_001136219,NM_001013625	chr1,chr1	+,-	FCGR2A,C1orf192	83357,-53722
chr16:31452540-31453101	chr16	+	31452648	31453146	True	NM_001136509,NM_001105247	chr16,chr16	-,+	ZNF843,ARMC5	1252,17170
chr11:10675654-10676910	chr11	+	10675825	10676854	True	NM_014633,NM_001098579	chr11,chr11	+,-	CTR9,MRVI1	95956,-1977
chr2:70186727-70188510	chr2	+	70186836	70188454	True	NM_152792,NM_002357	chr2,chr2	-,+	ASPRV1,MXD1	993,-44714
chr12:111808533-111809425	chr12	+	111808751	111808983	True	NM_001177996,NM_001177997,NM_005475,NM_144671	chr12,chr12,chr12,chr12	-,-,+,-	FAM109A,FAM109A,SH2B3,FAM109A	-1826,-1826,34768,-1826
chr10:72540270-72541593	chr10	+	72540402	72541532	True	NM_003901,NM_152710	chr10,chr10	+,-	SGPL1,C10orf27	34171,3675
chr11:67251376-67252034	chr11	+	67251573	67252081	True	NM_003977,NM_025124	chr11,chr11	+,-	AIP,TMEM134	-1119,-14842
chr17:56609838-56610648	chr17	+	56609957	56610671	True	NM_001198713,NM_002876,NM_004574,NM_080415,NM_080416,NR_037156,NR_037155	chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,-,-,-,-,-	SEPT4,RAD51C,SEPT4,SEPT4,SEPT4,SEPT4,SEPT4	7558,159291,-3179,-514,-514,-4583,-3179
chr5:146833959-146834770	chr5	+	146834059	146834807	True	NM_001387,NM_001112724	chr5,chr5	-,+	DPYSL3,STK32A	-799,-219542
chr4:56212923-56213145	chr4	+	56213010	56213166	True	NR_037969,NM_024592	chr4,chr4	-,+	LOC100506462,SRD5A3	38631,-673
chr1:185015540-185017418	chr1	+	185015640	185017392	True	NM_052966,NM_007212	chr1,chr1	-,+	FAM129A,RNF2	-71958,-1149
chr1:201343883-201345783	chr1	+	201343920	201345766	True	NM_000364,NM_001005337,NM_001001431,NM_001001430,NM_001001432	chr1,chr1,chr1,chr1,chr1	-,+,-,-,-	TNNT2,PKP1,TNNT2,TNNT2,TNNT2	1089,-91391,1089,1089,1089
chr6:123318021-123318723	chr6	+	123318195	123318581	True	NM_001010852,NM_020755	chr6,chr6	+,-	CLVS2,SERINC1	-664,-525243
chr10:101291270-101291993	chr10	+	101291537	101291937	True	NM_031212,NM_145285	chr10,chr10	-,+	SLC25A28,NKX2-3	88338,752
chr16:30086078-30086596	chr16	+	30086168	30086395	True	NM_002720,NM_004608,NM_184041	chr16,chr16,chr16	+,-,+	PPP4C,TBX6,ALDOA	988,16867,-9184
chr9:141105213-141106788	chr7	-	36373	37459	False	NM_002607,NM_020223	chr7,chr7	-,+	PDGFA,FAM20C	522072,155509
chr9:141105213-141106788	chr3	+	197878155	197879241	False	NR_003291	chr3	-	LOC348840	-70613
chr9:141105213-141106788	chr16	+	90167744	90167802	True	NM_001098173,NR_023348	chr16,chr16	-,+	PRDM7,GAS8	-25406,-78795
chr2:72373643-72373889	chr2	+	72373678	72373934	True	NM_019885,NM_001130987	chr2,chr2	-,+	CYP26B1,DYSF	1079,-679897
chr20:2455527-2456359	chr20	+	2455540	2456195	True	NM_003091,NM_080751,NM_198216	chr20,chr20,chr20	-,+,-	SNRPB,TMC2,SNRPB	-4041,61057,-4041
chr7:74283329-74283755	chr7	+	74283653	74283727	True	NM_173537,NR_027775	chr7,chr7	-,+	GTF2IRD2,PMS2P5	-15812,23166
chr7:74283329-74283755	chr7	-	74492503	74492577	False	NM_030798,NM_001003795	chr7,chr7	-,+	WBSCR16,GTF2IRD2B	-2804,15769
chr5:60630627-60631809	chr5	+	60630640	60631758	True	NM_001048249,NM_020928	chr5,chr5	-,+	C5orf43,ZSWIM6	-172338,-2600
chr19:571822-572164	chr19	+	571891	572089	True	NM_198589,NM_005035,NM_001728,NM_198591	chr19,chr19,chr19,chr19	+,-,+,+	BSG,POLRMT,BSG,BSG	447,61533,447,-621
chr18:3448487-3448855	chr18	+	3448766	3448892	True	NM_019856,NM_173211,NM_173210,NM_173208,NM_170695,NM_003244,NM_173209,NM_173207	chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18	-,+,+,+,+,+,+,+	MYOM1,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1	-228660,4879,2698,1138,2698,1279,1080,-1209
chr16:4818385-4818621	chr16	+	4818452	4818636	True	NM_021646,NR_029453	chr16,chr16	-,+	ZNF500,LOC440335	-1286,19761
chrX:117957210-117957850	chrX	+	117957276	117957746	True	NM_173798,NM_020721	chrX,chrX	+,-	ZCCHC12,KIAA1210	40,326846
chr1:187232845-187233995	chr1	+	187233045	187234011	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-583486,-435071
chrX:150066875-150067083	chrX	+	150066989	150067065	True	NM_031462,NM_001184808,NM_134446,NM_134445,NM_005342	chrX,chrX,chrX,chrX,chrX	-,-,-,-,+	CD99L2,CD99L2,CD99L2,CD99L2,HMGB3	274,274,274,274,84697
chr1:156723999-156724455	chr1	+	156724072	156724416	True	NM_004494,NM_005973,NM_001126051,NM_001126050	chr1,chr1,chr1,chr1	-,+,-,-	HDGF,PRCC,HDGF,HDGF	-2529,12857,-2048,-1832
chr1:27188139-27188585	chr1	+	27188138	27188584	True	NM_018066,NM_006142	chr1,chr1	-,+	GPN2,SFN	28335,1048
chr12:59306131-59307351	chr12	+	59306333	59307370	True	NM_004731,NM_153377,NM_001136051	chr12,chr12,chr12	+,-,-	SLC16A7,LRIG3,LRIG3	775755,6943,6008
chr10:14881015-14881428	chr10	+	14881074	14881231	True	NM_001029954,NM_016299	chr10,chr10	-,+	CDNF,HSPA14	-1091,-864
chrX:70316729-70318676	chrX	+	70316744	70318674	True	NM_005938,NM_001170931,NR_033212,NM_001025265	chrX,chrX,chrX,chrX	+,+,-,-	FOXO4,FOXO4,CXorf65,CXorf65	-796,-796,8015,8015
chrX:101476907-101477546	chrX	+	101476934	101477588	True	NM_001012978,NM_017809,NM_001099686	chrX,chrX,chrX	-,+,+	BEX5,NXF2,NXF2B	-65948,-6712,-6712
chrX:101476907-101477546	chrX	-	101719435	101720089	False	NM_017809,NR_002216,NM_001099686	chrX,chrX,chrX	-,+,-	NXF2,NXF4,NXF2B	6700,84803,6700
chr4:103234637-103235264	chr4	+	103234683	103235311	True	NM_001135148,NM_001165412	chr4,chr4	-,+	SLC39A8,NFKB1	10208,187174
chr17:42019838-42020484	chr17	+	42019942	42020450	True	NR_026770,NM_002722	chr17,chr17	+,-	C17orf88,PPY	-25417,-109
chr5:38846473-38846813	chr5	+	38846483	38846735	True	NM_003999,NM_001168355,NM_152756	chr5,chr5,chr5	+,+,-	OSMR,OSMR,RICTOR	-433,-574,227816
chr6:108324677-108325111	chr6	+	108324888	108325144	True	NM_007214,NM_003269	chr6,chr6	-,+	SEC63,NR2E1	-45406,162070
chrX:34672128-34673932	chrX	+	34672131	34673559	True	NM_152631,NM_031442	chrX,chrX	+,-	FAM47B,TMEM47	287353,1896
chr3:9743629-9745470	chr3	+	9743944	9745294	True	NM_003656,NM_153635	chr3,chr3	-,+	CAMK1,CPNE9	66424,215
chr1:15479093-15479317	chr1	+	15479136	15479316	True	NM_001136216,NM_001136217,NM_001136218,NM_018022,NR_027136	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	TMEM51,TMEM51,TMEM51,TMEM51,C1orf126	-159,-159,912,912,-176
chr22:46654625-46655118	chr22	+	46654636	46655092	True	NM_207327,NM_006071,NM_017931	chr22,chr22,chr22	-,-,+	C22orf40,PKDREJ,TTC38	-8443,4189,8768
chr10:126481560-126481796	chr10	+	126481702	126481812	True	NM_032182,NM_212554	chr10,chr10	+,-	FAM175B,METTL10	8541,-1263
chr5:99417093-99417418	chr5	+	99417203	99417392	True	NM_198507,NR_027503	chr5,chr5	+,-	FAM174A,LOC100133050	453731,306619
chr5:99417093-99417418	chr5	-	98829205	98829258	False	NM_001270,NR_036530	chr5,chr5	-,+	CHD1,LOC100289230	-566967,-564421
chr19:46852766-46853530	chr19	+	46852789	46853542	True	NM_006247,NM_001204284,NM_032040	chr19,chr19,chr19	+,+,-	PPP5C,PPP5C,CCDC8	-2589,-2589,63427
chr3:13008427-13008773	chr3	+	13008447	13008805	True	NM_014869,NM_012298	chr3,chr3	-,+	IQSEC1,CAND2	205,-170327
chr17:26370316-26371387	chr17	+	26370319	26371423	True	NM_001076680,NM_016231	chr17,chr17	-,+	C17orf108,NLK	-149910,-689
chr17:46019028-46019229	chr17	+	46019063	46019167	True	NM_024320,NM_018129	chr17,chr17	-,+	PRR15L,PNPO	15993,-225
chrX:47502156-47504072	chrX	+	47502283	47503922	True	NM_001114123,NR_028119,NM_005229	chrX,chrX,chrX	-,+,-	ELK1,LOC100133957,ELK1	6131,14309,6131
chr4:146541070-146541352	chr4	+	146541074	146541382	True	NM_178835,NM_172250	chr4,chr4	-,+	ZNF827,MMAA	318276,-586
chr2:95871701-95872126	chr2	+	95871716	95872113	True	NM_021088,NM_032788	chr2,chr2	+,-	ZNF2,ZNF514	-40585,-46453
chr12:128055511-128057321	chr12	+	128055523	128057368	True	NR_033970,NR_033987	chr12,chr12	-,+	LOC440117,FLJ37505	-696287,308793
chr20:2082796-2083028	chr20	+	2082797	2083043	True	NM_080836,NM_024411	chr20,chr20	+,-	STK35,PDYN	-320,-107866
chr1:27339587-27339865	chr1	+	27339641	27339859	True	NM_052943,NM_001013642	chr1,chr1	-,+	FAM46B,TRNP1	-308,-19497
chr20:34740985-34742085	chr20	+	34741034	34742016	True	NM_012156,NR_027451	chr20,chr20	+,-	EPB41L1,LOC647979	645,-102152
chr19:5342522-5342869	chr19	+	5342670	5342874	True	NM_130854,NM_130855,NM_002850,NM_181710,NM_130853	chr19,chr19,chr19,chr19,chr19	-,-,-,+,-	PTPRS,PTPRS,PTPRS,ZNRF4,PTPRS	-1856,-1856,-1856,112551,-1856
chr11:10880407-10882121	chr11	+	10880461	10881881	True	NM_001143667,NM_021211,NR_034137	chr11,chr11,chr11	-,-,+	ZBED5,ZBED5,LOC729013	-841,-841,-748
chr16:3163937-3164523	chr16	+	3164044	3164366	True	NM_001042428,NR_024167,NR_024166,NM_003456	chr16,chr16,chr16,chr16	+,-,-,+	ZNF205,MGC3771,MGC3771,ZNF205	-1532,1283,1283,-1532
chr3:196063168-196064088	chr3	+	196063331	196063886	True	NM_138461,NM_001204898,NM_152672,NM_001204897,NR_037950	chr3,chr3,chr3,chr3,chr3	-,-,+,-,-	TM4SF19,TM4SF19,OSTalpha,TM4SF19,TM4SF19-TCTEX1D2	1460,1460,-119999,1460,1460
chr15:39874774-39875181	chr15	+	39874798	39875226	True	NM_152597,NM_003246	chr15,chr15	-,+	FSIP1,THBS1	199863,-1569
chr4:81119479-81120475	chr4	+	81119559	81120515	True	NM_001099403,NM_001145794	chr4,chr4	+,-	PRDM8,ANTXR2	-956,-125082
chr4:85782133-85783997	chr4	+	85782830	85783816	True	NM_014991,NR_015359	chr4,chr4	-,+	WDFY3,NCRNA00247	103780,104154
chr5:60943834-60944503	chr5	+	60943838	60944350	True	NM_001048249,NM_173667	chr5,chr5	-,+	C5orf43,FLJ37543	-485536,-10253
chr6:46697012-46697377	chr6	+	46697058	46697416	True	NM_001162435,NM_001168357,NM_005084	chr6,chr6,chr6	+,-,-	LOC100287718,PLA2G7,PLA2G7	17237,6064,5785
chr12:102132887-102133286	chr12	+	102133035	102133315	True	NM_153694,NM_001177949,NM_001177948,NM_020244	chr12,chr12,chr12,chr12	-,-,-,+	SYCP3,SYCP3,SYCP3,CHPT1	-15,-15,-15,-41669
chr1:40782002-40782219	chr1	+	40782010	40782206	True	NM_022733,NM_001852	chr1,chr1	+,-	SMAP2,COL9A2	57171,783
chr16:69161806-69162109	chr16	+	69162090	69162158	True	NM_001039690,NR_033227,NM_001040146,NM_032830	chr16,chr16,chr16,chr16	-,-,-,+	CHTF8,CHTF8,CHTF8,CIRH1A	4385,4385,3954,4340
chr18:43547595-43548380	chr18	+	43547622	43548156	True	NM_020964,NM_138443	chr18,chr18	-,+	EPG5,HAUS1	-317,136141
chr12:8686873-8687612	chr12	+	8687023	8687627	True	NM_014358,NM_080387	chr12,chr12	-,+	CLEC4E,CLEC4D	5981,-20949
chr5:170772183-170772421	chr5	+	170772201	170772341	True	NM_021025,NR_037474	chr5,chr5	+,-	TLX3,MIR3912	-35967,41473
chr11:102188212-102188432	chr11	+	102188214	102188298	True	NM_001165,NM_052932,NM_182962	chr11,chr11,chr11	+,-,+	BIRC3,TMEM123,BIRC3	-71,135527,-71
chr11:62494488-62494965	chr11	+	62494503	62494811	True	NM_001079559,NR_037946,NM_173810	chr11,chr11,chr11	-,-,+	HNRNPUL2,HNRNPUL2-BSCL2,TTC9C	96,95,1140
chr19:34289409-34290116	chr19	+	34289569	34290151	True	NM_001129995,NM_001129994,NM_001166057,NM_024076	chr19,chr19,chr19,chr19	+,+,-,+	KCTD15,KCTD15,PEPD,KCTD15	-1869,-1869,-276770,-1869
chr22:39749160-39749483	chr22	+	39749237	39749531	True	NM_001033853,NM_145731,NM_004711	chr22,chr22,chr22	-,+,+	RPL3,SYNGR1,SYNGR1	-33567,-3334,-3334
chr1:27707697-27708699	chr1	+	27707733	27708739	True	NM_207397,NM_005281,NM_003665,NM_173452	chr1,chr1,chr1,chr1	-,+,-,-	CD164L2,GPR3,FCN3,FCN3	1116,10412,-6418,-6418
chr8:72240600-72242129	chr8	+	72240639	72241999	True	NM_172058,NR_033652	chr8,chr8	-,+	EYA1,LOC100132891	27030,513358
chr5:93386483-93387923	chr5	+	93386799	93387912	True	NM_001163417,NM_005654	chr5,chr5	-,+	FAM172A,NR2F1	59543,-467807
chr1:39323351-39324224	chr1	+	39323648	39324090	True	NM_001136275,NM_022157	chr1,chr1	+,-	AKIRIN1,RRAGC	132825,1300
chr21:44072328-44072803	chr21	+	44072419	44072633	True	NM_001001585,NM_001001584,NM_001001574,NM_080860,NM_002606,NM_001001578,NM_001001579,NM_001001569,NM_001001568,NM_001001581,NM_001001580,NM_001001583,NM_001001582,NM_001001570,NM_001001571,NM_001001572,NM_001001573,NM_001001567,NM_001001575,NM_001001576,NM_001001577	chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21	+,+,+,-,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+	PDE9A,PDE9A,PDE9A,RSPH1,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A	1228,1228,1228,-156018,1228,1228,1228,1228,1228,1228,1228,1228,1228,1228,1228,1228,1228,1228,1228,1228,1228
chr1:22470798-22472091	chr1	+	22470888	22472017	True	NM_030761,NM_001791	chr1,chr1	-,+	WNT4,CDC42	-1369,-91819
chr9:133588898-133589187	chr9	+	133589075	133589203	True	NM_007313,NR_027440	chr9,chr9	+,-	ABL1,LOC100272217	64,-134194
chr17:50236259-50236734	chr17	+	50236389	50236689	True	NM_001082534,NM_020178,NM_001082533,NM_016001	chr17,chr17,chr17,chr17	-,-,-,+	CA10,CA10,CA10,UTP18	738,-257,522,-898543
chr1:44398379-44399049	chr1	+	44398427	44399027	True	NM_057090,NM_001136215,NM_006934,NM_057091	chr1,chr1,chr1,chr1	+,+,-,+	ARTN,ARTN,SLC6A9,ARTN	-2,-2,84020,-2
chr21:48061458-48061721	chr21	+	48061650	48061712	True	NM_006272,NM_001535	chr21,chr21	-,+	S100B,PRMT2	-36615,-6174
chr17:78117016-78117497	chr17	+	78117112	78117491	True	NM_024110,NM_014740	chr17,chr17	+,-	CARD14,EIF4A3	34789,3544
chrX:13587433-13587850	chrX	+	13587472	13587892	True	NM_001011658,NM_001167890,NM_015507	chrX,chrX,chrX	-,+,+	TRAPPC2,EGFL6,EGFL6	164912,72,72
chr6:89771274-89771803	chr6	+	89771562	89771723	True	NM_006813,NM_080743	chr6,chr6	+,-	PNRC1,SRSF12	18705,56136
chr4:100358694-100360129	chr4	+	100358834	100360118	True	NM_000673,NM_001166504,NM_032149	chr4,chr4,chr4	-,-,+	ADH7,ADH7,C4orf17	-2167,-2543,72042
chr18:78000271-78001214	chr18	+	78000442	78001260	True	NR_028339	chr18	+	LOC100130522	-94686
chr11:64529578-64530205	chr11	+	64529786	64530180	True	NM_006244,NM_001164716,NM_005609	chr11,chr11,chr11	+,-,-	PPP2R5B,PYGM,PYGM	161962,-1599,-1599
chr2:188235823-188236385	chr2	+	188236007	188236306	True	NM_005795,NM_177454	chr2,chr2	-,+	CALCRL,FAM171B	76772,-677269
chr3:47821928-47822142	chr3	+	47821937	47822161	True	NM_014966,NM_003074	chr3,chr3	+,-	DHX30,SMARCC1	22237,1294
chr6:43021793-43022822	chr6	+	43021987	43022399	True	NM_015950,NM_001168370,NM_014780,NM_201521,NM_201523,NM_201522,NM_138343	chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,+,+,+,+	MRPL2,CUL7,CUL7,KLC4,KLC4,KLC4,KLC4	4901,-304,-304,4972,5229,5782,4972
chr19:2282724-2283122	chr19	+	2282730	2282982	True	NM_198532,NM_004152	chr19,chr19	-,+	C19orf35,OAZ1	-549,-13261
chr7:918509-918916	chr7	+	918533	918873	True	NM_015949,NM_006869	chr7,chr7	+,-	GET4,ADAP1	-2394,75466
chr8:32587893-32589614	chr8	+	32588139	32589497	True	NM_032664,NM_001159996	chr8,chr8	-,+	FUT10,NRG1	741217,-8853
chr1:27692049-27692293	chr1	+	27692152	27692288	True	NM_032872,NM_003665,NM_004672,NM_173452	chr1,chr1,chr1,chr1	+,-,-,-	SYTL1,FCN3,MAP3K6,FCN3	-23720,9077,1099,9077
chr1:101463786-101465249	chr1	+	101464096	101464753	True	NM_001077394,NM_133496	chr1,chr1	-,+	DPH5,SLC30A7	26660,-102526
chr5:108745559-108746497	chr5	+	108745810	108746534	True	NM_014819,NM_002372	chr5,chr5	-,+	PJA2,MAN2A1	-135,278621
chr4:49296168-49296497	chr4	+	49296311	49296384	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-308104,-387496
chr11:637670-637873	chr11	+	637719	637873	True	NM_000797,NM_021920	chr11,chr11	+,-	DRD4,SCT	-465,-10546
chr12:89745696-89745983	chr12	+	89745730	89745818	True	NR_028138,NM_022652,NM_001946	chr12,chr12,chr12	+,-,-	LOC338758,DUSP6,DUSP6	356913,528,528
chr1:19188705-19190294	chr1	+	19188951	19190263	True	NM_001135254,NM_152232	chr1,chr1	+,-	PAX7,TAS1R2	-231502,-2796
chr9:34378064-34379444	chr9	+	34378613	34379417	True	NM_147168,NM_147169,NM_020702,NM_147173	chr9,chr9,chr9,chr9	-,-,-,+	C9orf24,C9orf24,KIAA1161,NUDT2	2231,2231,-1719,-49160
chr1:149262740-149263425	chr1	+	149262779	149263442	True	NM_001024599,NR_027002	chr1,chr1	-,+	HIST2H2BF,LOC388692	135840,16033
chr6:27527497-27528019	chr6	+	27527633	27527888	True	NM_001076781,NM_007149	chr6,chr6	+,-	ZNF391,ZNF184	-171171,-86736
chr10:115609914-115611815	chr10	+	115610013	115611451	True	NM_198514,NM_014881	chr10,chr10	+,-	NHLRC2,DCLRE1A	2939,2465
chr9:132961463-132962703	chr9	+	132961986	132962630	True	NM_001128826,NM_015033	chr9,chr9	+,-	NCS1,FNBP1	241,-156513
chr1:206269032-206269977	chr1	+	206269031	206269404	True	NM_000707,NM_001007544	chr1,chr1	+,-	AVPR1B,C1orf186	-44799,19302
chr1:143901803-143903264	chr1	+	143902281	143903097	True	NM_207418,NR_034178	chr1,chr1	-,+	FAM72D,SRGAP2P2	10106,12650
chr1:143901803-143903264	chr1	-	206148496	206149312	False	NM_001123168,NM_001007544	chr1,chr1	+,-	FAM72A,C1orf186	-9646,139392
chr1:143901803-143903264	chr1	-	120849036	120849852	False	NM_001004340,NM_001100910	chr1,chr1	-,+	FCGR1B,FAM72B	86149,-10092
chr1:143901803-143903264	chr1	+	149455693	149456392	False	NR_027484,NM_001024599	chr1,chr1	+,-	FCGR1C,HIST2H2BF	-86457,-56464
chr16:421047-421565	chr16	+	421052	421392	True	NM_006428,NR_024453	chr16,chr16	-,+	MRPL28,LOC100134368	-483,10848
chr6:44355487-44355722	chr6	+	44355497	44355637	True	NM_001253,NM_020745	chr6,chr6	+,-	CDC5L,AARS2	-246,-74434
chr3:50304650-50304955	chr3	+	50304802	50305004	True	NM_006764,NM_004636,NM_001005914	chr3,chr3,chr3	-,+,+	IFRD2,SEMA3B,SEMA3B	25072,35,35
chr4:49301960-49302307	chr4	+	49302202	49302260	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-313988,-393387
chr17:2204990-2205557	chr17	+	2205152	2205275	True	NM_021947,NM_001170957,NM_017575	chr17,chr17,chr17	+,-,-	SRR,SMG6,SMG6	1972,1601,1857
chrX:55052385-55052992	chrX	+	55052492	55053004	True	NM_001037967,NM_014481,NM_000032,NM_001037968	chrX,chrX,chrX,chrX	-,+,-,-	ALAS2,APEX2,ALAS2,ALAS2	4543,-25763,4543,4543
chr5:122187887-122188197	chr5	+	122187960	122188046	True	NM_000943,NM_014035	chr5,chr5	-,+	PPIC,SNX24	184429,-6851
chr3:50398133-50399555	chr3	+	50398310	50399467	True	NM_007022,NM_007024,NM_006545	chr3,chr3,chr3	+,-,-	CYB561D2,TMEM115,NPRL2	-10064,-1371,-9824
chr2:230579360-230579579	chr2	+	230579447	230579515	True	NM_174899,NM_139072	chr2,chr2	+,-	FBXO36,DNER	207691,-161
chr19:47130028-47130262	chr19	+	47130027	47130141	True	NM_033258,NM_000960,NM_005184	chr19,chr19,chr19	-,-,+	GNG8,PTGIR,CALM3	7848,-1673,-25566
chr1:23494787-23495180	chr1	+	23494928	23495102	True	NM_033631,NM_001142546,NR_036057	chr1,chr1,chr1	-,-,+	LUZP1,LUZP1,MIR3115	299,299,-124181
chr12:49388872-49389190	chr12	+	49388901	49389161	True	NM_015086,NM_005430	chr12,chr12	-,+	DDN,WNT1	3977,-16718
chr17:67410319-67410724	chr17	+	67410443	67410727	True	NM_172232,NM_002758	chr17,chr17	-,+	ABCA5,MAP2K6	-87120,110
chr14:102023985-102024313	chr14	+	102024023	102024289	True	NR_002770,NR_031649,NM_001362	chr14,chr14,chr14	-,-,+	DIO3OS,MIR1247,DIO3	-2010,2520,3398
chr15:66798028-66798332	chr15	+	66798097	66798323	True	NM_006049,NM_000968,NR_003105,NR_002440,NR_002441,NR_002442,NR_002443,NM_017975	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,+,-,-,-,-,+	SNAPC5,RPL4,ZWILCH,SNORD16,SNORD18A,SNORD18B,SNORD18C,ZWILCH	-7951,-913,-729,-2849,-2445,-3668,-4441,-729
chr14:24806108-24807149	chr14	+	24806511	24807077	True	NM_139247,NM_181657,NM_001198592,NM_001198568,NM_006871	chr14,chr14,chr14,chr14,chr14	-,+,-,-,-	ADCY4,LTB4R,ADCY4,ADCY4,RIPK3	-2234,-24256,-2234,-2234,2215
chr14:67706495-67707185	chr14	+	67706648	67707106	True	NM_022474,NM_015994	chr14,chr14	+,-	MPP5,ATP6V1D	914,119664
chr2:201676344-201676595	chr2	+	201676403	201676559	True	NM_001162407,NM_014670	chr2,chr2	-,+	CLK1,BZW1	52775,87
chr11:12133431-12134813	chr11	+	12133443	12134672	True	NM_013253,NM_014632	chr11,chr11	-,+	DKK3,MICAL2	-102526,-1356
chr9:35406363-35406742	chr9	+	35406430	35406790	True	NM_001099951,NR_003582,NR_003581	chr9,chr9,chr9	-,+,+	FAM166B,ATP8B5P,ATP8B5P	157156,-39,-26
chr15:45423372-45424734	chr15	+	45423466	45424712	True	NM_144565,NM_175940,NM_017434	chr15,chr15,chr15	-,+,+	DUOXA1,DUOX1,DUOX1	-1409,-1325,-1325
chr2:102607766-102608361	chr2	+	102607778	102608218	True	NM_173343,NM_004633,NM_001145664	chr2,chr2,chr2	+,+,-	IL1R2,IL1R2,RFX8	7240,87,-516613
chr1:205899121-205900685	chr1	+	205899278	205900488	True	NM_052934,NM_001123168	chr1,chr1	-,+	SLC26A9,FAM72A	12156,238422
chr2:134900567-134901654	chr2	+	134900655	134901547	True	NM_030923,NM_207481,NR_037450	chr2,chr2,chr2	-,-,+	TMEM163,NCKAP5,MIR3679	575074,-574624,-16012
chr13:100633027-100633249	chr13	+	100633090	100633250	True	NM_033132,NM_007129	chr13,chr13	-,+	ZIC5,ZIC2	-8912,775
chr6:38579388-38581117	chr6	+	38579388	38581049	True	NM_152733,NM_001371	chr6,chr6	-,+	BTBD9,DNAH8	-15545,109502
chr15:41055749-41056126	chr15	+	41055750	41056122	True	NM_018145,NM_001130448,NM_005258	chr15,chr15,chr15	-,+,+	FAM82A2,C15orf62,GCHFR	-8292,6036,162
chr5:166715778-166716545	chr5	+	166716109	166716560	True	NM_001122679,NR_029520	chr5,chr5	+,-	ODZ2,MIR103-1	-4317,1271481
chr19:51874731-51875774	chr19	+	51874808	51875744	True	NM_001985,NM_152353,NR_033235,NM_005601	chr19,chr19,chr19,chr19	-,-,+,-	ETFB,CLDND2,LOC100129083,NKG7	-5136,-2551,43415,266
chr4:49300847-49301868	chr4	+	49300904	49301478	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-312690,-392089
chr4:49300847-49301868	chr4	+	49294749	49294889	False	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-306535,-385934
chr12:64064777-64066436	chr12	+	64065131	64065209	True	NM_014254,NM_173812	chr12,chr12	+,-	TMEM5,DPY19L2	108427,-2777
chr22:25758619-25759137	chr22	+	25758739	25759185	True	NR_029395,NM_182492	chr22,chr22	+,-	IGLL3P,LRP5L	-44566,-215
chrX:151806650-151806921	chrX	+	151806654	151806830	True	NM_001129826,NM_018558	chrX,chrX	-,+	CSAG3,GABRQ	70890,-68
chr22:44422225-44423018	chr22	+	44422298	44422942	True	NM_013327,NM_138814	chr22,chr22	+,-	PARVB,PNPLA5	-2181,-134405
chr6:90141278-90142791	chr6	+	90141504	90142601	True	NM_021244,NM_014942	chr6,chr6	-,+	RRAGD,ANKRD6	-19509,295
chr14:23939082-23940747	chr14	+	23939167	23940676	True	NM_000257,NM_001042635,NM_015514	chr14,chr14,chr14	-,+,+	MYH7,NGDN,NGDN	-34297,-320,-320
chr19:39575312-39575882	chr19	+	39575594	39575664	True	NM_178820,NM_001004318	chr19,chr19	-,+	FBXO27,PAPL	-52396,-700
chr12:39300574-39301921	chr12	+	39300709	39301733	True	NM_001013620,NM_153634	chr12,chr12	+,-	ALG10B,CPNE8	-590203,-1289
chr11:64780334-64781174	chr11	+	64780352	64781062	True	NM_001199745,NR_037650,NM_001667,NM_138456	chr11,chr11,chr11,chr11	+,+,+,-	ARL2,ARL2-SNX15,ARL2,BATF2	522,522,522,-15835
chr1:27227338-27227986	chr1	+	27227347	27227652	True	NM_022078,NM_006600	chr1,chr1	-,+	GPATCH3,NUDC	-385,20571
chr13:101325039-101326086	chr13	+	101325164	101325968	True	NM_032813,NM_001178004,NM_001079669	chr13,chr13,chr13	-,+,-	TMTC4,PCCA,TMTC4	1185,-583946,1185
chr20:5939587-5940385	chr20	+	5939644	5940338	True	NM_015939,NM_032485,NM_182802	chr20,chr20,chr20	-,+,+	TRMT6,MCM8,MCM8	-8471,-8408,-8408
chr3:38054301-38054794	chr3	+	38054301	38054697	True	NM_015873,NM_001130964	chr3,chr3	+,-	VILL,PLCD1	-19280,11631
chr11:28129263-28129880	chr11	+	28129269	28129774	True	NM_031217,NM_152636,NM_001113528	chr11,chr11,chr11	-,+,+	KIF18A,METTL15,METTL15	22,23,23
chr10:115940526-115941458	chr10	+	115940612	115941305	True	NR_031747,NM_198795,NM_018017	chr10,chr10,chr10	-,+,-	MIR2110,TDRD1,C10orf118	-6674,-1641,-6248
chr1:156700235-156701209	chr1	+	156700686	156700878	True	NM_001142560,NM_015997,NM_030980	chr1,chr1,chr1	+,+,-	RRNAD1,RRNAD1,ISG20L2	-2481,-2481,-2981
chr19:17799270-17799491	chr19	+	17799335	17799523	True	NM_001080421,NM_018174	chr19,chr19	-,+	UNC13A,MAP1S	-327,30779
chr11:118890575-118891271	chr11	+	118890576	118891060	True	NM_001164280,NM_016146,NM_001028,NR_037429	chr11,chr11,chr11,chr11	-,+,-,+	SLC37A4,TRAPPC4,RPS25,MIR3656	9268,-1386,-1519,-973
chr17:7988263-7989011	chr17	+	7988408	7988966	True	NR_036201,NM_001139	chr17,chr17	+,-	MIR4314,ALOX12B	2407,2105
chr17:46798185-46799484	chr17	+	46798222	46799402	True	NR_036150,NR_024103,NM_032391,NM_006361	chr17,chr17,chr17,chr17	-,+,-,-	MIR3185,NCRNA00253,PRAC,HOXB13	2485,1139,530,6759
chr12:21680913-21681293	chr12	+	21681093	21681295	True	NM_030572,NM_032941	chr12,chr12	+,-	C12orf39,RECQL	-1895,-26490
chr7:82784586-82785655	chr7	+	82784628	82785594	True	NM_033026,NM_014510,NM_001127444	chr7,chr7,chr7	-,-,+	PCLO,PCLO,CD36	6653,6653,-2508917
chr12:6235756-6236462	chr12	+	6235952	6236091	True	NM_001769,NM_000552	chr12,chr12	+,-	CD9,VWF	73390,-2116
chr19:39825930-39826174	chr19	+	39826058	39826174	True	NM_018028,NM_004877	chr19,chr19	+,-	SAMD4B,GMFG	6933,602
chr17:73938433-73939229	chr17	+	73938565	73938956	True	NM_001080542,NM_001113324	chr17,chr17	-,+	FBF1,C17orf106	-1446,36341
chr19:984817-985328	chr19	+	984833	985164	True	NM_024100,NM_001033026	chr19,chr19	+,-	WDR18,C19orf6	-556,36028
chr3:150279084-150279704	chr3	+	150279392	150279566	True	NM_014445,NM_032025	chr3,chr3	-,+	SERP1,EIF2A	-14964,-14869
chr2:949081-949937	chr2	+	949195	949776	True	NM_018968,NR_033880	chr2,chr2	+,-	SNTG2,LOC339822	-2692,-85083
chr17:3750573-3750783	chr17	+	3750590	3750766	True	NM_018553,NM_031965,NM_001114118	chr17,chr17,chr17	-,+,-	C17orf85,GSG2,C17orf85	-1050,-123444,-1050
chrX:2847758-2847988	chrX	+	2847897	2848023	True	NM_009589,NM_001011719,NM_001669	chrX,chrX,chrX	-,+,-	ARSD,ARSH,ARSD	-505,76630,-505
chr1:6762625-6763621	chr1	+	6762797	6763515	True	NM_018198,NM_138350	chr1,chr1	-,+	DNAJC11,THAP3	-831,-77639
chr10:30990515-30990843	chr10	+	30990584	30990858	True	NM_183058,NM_005204	chr10,chr10	-,+	LYZL2,MAP3K8	-71937,-267769
chr10:30990515-30990843	chr10	-	29771925	29771975	False	NR_030335,NR_003930	chr10,chr10	-,+	MIR604,LOC387647	62101,-73475
chr2:233416081-233416354	chr2	+	233416190	233416342	True	NM_004846,NM_145702	chr2,chr2	+,-	EIF4E2,TIGD1	-891,-964
chr6:5000580-5000954	chr6	+	5000793	5000982	True	NM_001145115,NM_006638	chr6,chr6	+,-	PPP1R3G,RPP40	84737,3340
chr17:18129413-18129685	chr17	+	18129473	18129639	True	NM_004140,NM_002018	chr17,chr17	+,-	LLGL1,FLII	-588,32466
chr4:39194180-39194872	chr4	+	39194375	39194768	True	NM_025132,NM_024943	chr4,chr4	+,-	WDR19,TMEM156	-10407,-160334
chr5:118687776-118688295	chr5	+	118687835	118688314	True	NM_173666,NM_014350	chr5,chr5	-,+	DTWD2,TNFAIP8	-363595,3281
chr2:192710943-192711507	chr2	+	192711036	192711506	True	NM_004657,NM_001031716	chr2,chr2	-,+	SDPR,OBFC2A	550,-168226
chr17:40610514-40610799	chr17	+	40610631	40610695	True	NM_001130021,NM_001130020,NM_005177,NM_012232	chr17,chr17,chr17,chr17	+,+,+,-	ATP6V0A1,ATP6V0A1,ATP6V0A1,PTRF	166,166,166,-35293
chrY:25344894-25345194	chrY	+	25344966	25345165	True	NM_020364,NM_020420,NM_001005375,NM_004081	chrY,chrY,chrY,chrY	+,-,-,-	DAZ3,DAZ4,DAZ4,DAZ1	20415,139,139,124
chrY:25344894-25345194	chrY	-	25365669	25365868	False	NM_020364,NM_020420,NM_001005786,NM_001005785,NM_020363	chrY,chrY,chrY,chrY,chrY	+,+,+,+,+	DAZ3,DAZ4,DAZ2,DAZ2,DAZ2	-139,-139,-116,-116,-116
chrY:25344894-25345194	chrY	+	26959351	26959550	False	NM_020364,NM_001005375,NM_020420	chrY,chrY,chrY	-,+,-	DAZ3,DAZ4,DAZ4	139,20416,139
chrY:25344894-25345194	chrY	-	26980055	26980254	False	NM_020364,NM_020420,NM_001005375,NM_001005786,NM_001005785	chrY,chrY,chrY,chrY,chrY	+,+,+,+,+	DAZ3,DAZ4,DAZ4,DAZ2,DAZ2	-139,-139,-139,-116,-116
chr2:97202053-97202345	chr2	+	97202090	97202284	True	NM_212481,NR_026875	chr2,chr2	+,-	ARID5A,NEURL3	179,-28244
chr8:142435304-142435779	chr8	+	142435347	142435543	True	NM_005293,NM_007079,NM_032611	chr8,chr8,chr8	-,+,+	GPR20,PTP4A3,PTP4A3	-57982,-3391,-3391
chr3:183736100-183736577	chr3	+	183736112	183736444	True	NM_182537,NM_001023587,NM_005688	chr3,chr3,chr3	+,-,-	HTR3D,ABCC5,ABCC5	12887,-385,-385
chr19:42091264-42091845	chr19	+	42091273	42091819	True	NM_001098506,NM_033543,NM_001817	chr19,chr19,chr19	+,+,-	CEACAM21,CEACAM21,CEACAM4	-8793,-8793,41673
chr14:100267874-100269086	chr14	+	100268161	100268885	True	NM_004434,NM_001008707,NM_001144995	chr14,chr14,chr14	+,+,-	EML1,EML1,CCDC85C	-8469,-8469,-197434
chr13:110438893-110439126	chr13	+	110438911	110439001	True	NM_003749,NM_001846	chr13,chr13	-,+	IRS2,COL4A2	3,520629
chr7:152133573-152133788	chr7	+	152133578	152133740	True	NR_002935,NM_170606	chr7,chr7	+,-	FABP5P3,MLL3	239,-488
chr10:121488433-121489179	chr10	+	121488466	121489061	True	NM_003252,NM_014937,NR_003251	chr10,chr10,chr10	-,+,+	TIAL1,INPP5F,INPP5F	-131925,-2909,-2909
chrX:100075535-100077004	chrX	+	100075612	100076602	True	NM_001325,NM_007052	chrX,chrX	+,-	CSTF2,NOX1	-315,52782
chr16:3508355-3508782	chr16	+	3508478	3508778	True	NM_001083600,NM_024845,NM_152457	chr16,chr16,chr16	+,+,-	NAT15,NAT15,ZNF597	-537,-537,-14988
chr9:112083546-112083759	chr9	+	112083623	112083759	True	NM_018424,NM_019114,NM_001037293	chr9,chr9,chr9	-,-,+	EPB41L4B,EPB41L4B,PALM2	-602,-602,319308
chr19:8478480-8479455	chr19	+	8478646	8479502	True	NM_016496,NM_001005416,NM_001005415,NM_198471	chr19,chr19,chr19,chr19	+,+,+,-	MARCH2,MARCH2,MARCH2,KANK3	-513,-513,-513,-70500
chr1:86166952-86167916	chr1	+	86167164	86167933	True	NM_001554,NM_001170670,NM_017953	chr1,chr1,chr1	+,-,-	CYR61,ZNHIT6,ZNHIT6	-120780,6236,6236
chr1:20964978-20966345	chr1	+	20965265	20966292	True	NM_005216,NM_032409	chr1,chr1	-,+	DDOST,PINK1	21795,-5375
chr1:16348424-16349077	chr1	+	16348448	16348994	True	NM_014424,NM_004070,NM_001042704	chr1,chr1,chr1	-,+,+	HSPB7,CLCNKA,CLCNKA	-3163,-13,-13
chr2:113010633-113012205	chr2	+	113010724	113012151	True	NM_032494,NM_198581	chr2,chr2	-,+	ZC3H8,ZC3H6	563,21026
chr18:72057178-72057423	chr11	+	64888256	64888995	False	NM_001997,NR_037568,NR_037567,NM_014205,NM_003273,NM_004927	chr11,chr11,chr11,chr11,chr11,chr11	-,+,+,-,+,+	FAU,MRPL49,MRPL49,ZNHIT2,TM7SF2,MRPL49	1190,720,659,-3086,-9140,720
chr18:72057178-72057423	chr18	+	72057234	72057428	True	NM_001044369,NM_001174123	chr18,chr18	-,+	FAM69C,DKFZP781G0119	67125,-74175
chr22:35539894-35541313	chr22	+	35539944	35541209	True	NM_001008494,NM_005368	chr22,chr22	+,-	ISX,MB	-77866,472238
chr15:25436823-25437869	chr15	+	25437007	25437699	True	NR_003308,NR_003358,NR_003311,NR_003310,NM_130838,NR_003305,NR_003344,NR_003309,NR_003351,NR_003299,NR_003300,NR_003301,NR_003302,NR_003303,NR_003304,NR_003297,NR_003306	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,-,+,+,+,+,+,+,+,+,+,+,+,+	SNORD115-16,SNORD115-43,SNORD115-19,SNORD115-18,UBE3A,SNORD115-13,SNORD115-29,SNORD115-17,SNORD115-36,SNORD115-7,SNORD115-8,SNORD115-9,SNORD115-10,SNORD115-11,SNORD115-12,SNORD115-5,SNORD115-14	6895,-2497,8770,8770,213004,768,-2497,8770,-2497,-9526,-7605,-495,-495,-2497,-495,-492,2368
chr4:11428983-11429418	chr4	+	11429070	11429398	True	NR_030298,NM_005114	chr4,chr4	+,-	MIR572,HS3ST1	-58670,1189
chr1:93642855-93644841	chr1	+	93643172	93644555	True	NM_016040,NM_206886,NM_001167830,NR_030761	chr1,chr1,chr1,chr1	-,+,-,-	TMED5,CCDC18,TMED5,TMED5	1749,1725,1749,1749
chr5:170733650-170733940	chr5	+	170733748	170733940	True	NM_021025,NR_037474	chr5,chr5	+,-	TLX3,MIR3912	2347,79874
chr6:74405651-74405901	chr6	+	74405697	74405845	True	NM_001159587,NM_012434,NM_133493,NM_001159588	chr6,chr6,chr6,chr6	+,-,+,+	CD109,SLC17A5,CD109,CD109	-240,-41960,-234,-240
chr3:33122784-33124234	chr3	+	33122801	33124079	True	NM_001039770,NM_006371	chr3,chr3	-,+	TMPPE,CRTAP	14264,31370
chr5:173128194-173128576	chr5	+	173128258	173128622	True	NR_027109,NM_138369	chr5,chr5	+,-	LOC285593,BOD1	-121652,-84592
chr5:125932187-125933333	chr5	+	125932486	125933160	True	NM_001201377,NM_032177,NM_001202404,NM_001182	chr5,chr5,chr5,chr5	-,+,-,-	ALDH7A1,PHAX,ALDH7A1,ALDH7A1	-1404,3446,-1404,-1404
chr20:57465118-57465389	chr20	+	57465136	57465216	True	NM_001077489,NM_001077488,NM_000516,NR_002785,NR_003259,NM_080426	chr20,chr20,chr20,chr20,chr20,chr20	+,+,+,-,+,+	GNAS,GNAS,GNAS,GNAS-AS1,GNAS,GNAS	1209,1209,1209,-39178,-1007,1209
chr1:32665119-32665321	chr1	+	32665162	32665236	True	NM_001160042,NM_018134,NM_001099434,NM_024296,NM_019118	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	IQCC,IQCC,DCDC2B,CCDC28B,TMEM234	5999,5999,9458,965,22740
chr6:34723388-34723888	chr6	+	34723408	34723895	True	NM_024294,NR_029472,NM_003093	chr6,chr6,chr6	-,+,+	C6orf106,SNRPC,SNRPC	-58783,975,975
chr11:122755843-122756748	chr11	+	122755923	122756731	True	NM_024806,NM_001098169,NM_199124	chr11,chr11,chr11	+,-,+	C11orf63,BSX,C11orf63	-2501,95698,-2501
chr16:28888538-28889416	chr16	+	28888580	28889435	True	NM_003321,NM_173201,NM_004320	chr16,chr16,chr16	-,+,+	TUFM,ATP2A1,ATP2A1	-30851,373,373
chr22:20256050-20256520	chr22	+	20256057	20256315	True	NM_023004,NR_026919	chr22,chr22	-,+	RTN4R,LOC150197	-241,-62253
chr3:120701092-120702904	chr3	+	120701166	120702890	True	NM_173825,NM_014980	chr3,chr3	-,+	RABL3,STXBP5L	-239782,-74167
chr2:191038777-191040243	chr2	+	191039075	191040266	True	NM_001042519,NM_005259,NM_032321	chr2,chr2,chr2	+,-,+	C2orf88,MSTN,C2orf88	5322,-111620,5414
chr19:51293065-51293675	chr19	+	51293106	51293532	True	NR_003068,NM_033068,NR_003067	chr19,chr19,chr19	-,+,-	SNORD88B,ACPT,SNORD88A	8900,139,9310
chr1:228293304-228294439	chr1	+	228293307	228294439	True	NM_181456,NM_181454,NM_181455,NM_181441,NR_037415,NM_181465,NM_181464,NM_024319,NM_181463,NM_181462	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,+,-,-,-,-,-	MRPL55,MRPL55,MRPL55,MRPL55,MIR3620,MRPL55,MRPL55,C1orf35,MRPL55,MRPL55	2624,2624,2624,2624,-8394,2624,2624,-2285,2624,2624
chr13:111560444-111561255	chr13	+	111560458	111561274	True	NM_017664,NM_005537	chr13,chr13	-,+	ANKRD10,ING1	6192,-193150
chr17:7488709-7489483	chr17	+	7489163	7489387	True	NM_004870,NM_001040059,NR_002912,NR_024603,NM_006942,NM_001251,NR_002604	chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,-,+,+	MPDU1,CD68,SNORA67,MPDU1,SOX15,CD68,SNORD10	-2249,-6408,-7941,-2249,4151,-6409,-9085
chr3:69816658-69817655	chr3	+	69817002	69817595	True	NM_001184967,NM_015123,NM_006722	chr3,chr3,chr3	+,-,+	MITF,FRMD4B,MITF	-4346,-381572,-4091
chr6:29853492-29855117	chr6	+	29854095	29854439	True	NR_001317,NR_001434	chr6,chr6	-,+	HCG4P6,HLA-H	39039,943
chr4:24918275-24918775	chr4	+	24918343	24918733	True	NM_001130726,NM_003102	chr4,chr4	-,+	CCDC149,SOD3	-3743,-121320
chr14:23847372-23847973	chr14	+	23847599	23847943	True	NM_022789,NM_138460,NR_029595,NM_172314,NM_001037288	chr14,chr14,chr14,chr14,chr14	+,+,-,+,+	IL25,CMTM5,MIR208A,IL25,CMTM5	-5580,-1633,9982,-5632,-1633
chr2:162181811-162182700	chr2	+	162181934	162182455	True	NM_001935,NM_005805	chr2,chr2	-,+	DPP4,PSMD14	748647,-17204
chr1:28447840-28448073	chr1	+	28447845	28447917	True	NR_027268,NM_016311	chr1,chr1	-,+	LOC653566,ATPIF1	-24776,114684
chr19:55896531-55896809	chr19	+	55896738	55896810	True	NM_139172,NM_001190764,NM_000991,NM_001136135,NM_001136134,NM_001136137,NM_001136136	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+,+	TMEM190,LOC388564,RPL28,RPL28,RPL28,RPL28,RPL28	-8585,-1111,489,489,489,489,489
chr8:124218104-124218674	chr8	+	124218610	124218688	True	NR_024479,NM_207006	chr8,chr8	-,+	LOC100131726,FAM83A	-3627,-23909
chr5:82391657-82391993	chr5	+	82391665	82391987	True	NM_022550,NM_174909	chr5,chr5	+,-	XRCC4,TMEM167A	-18399,-18393
chr12:50498822-50500598	chr12	+	50498827	50500624	True	NM_032901,NM_147190,NM_005276	chr12,chr12,chr12	+,-,+	C12orf62,LASS5,GPD1	5275,60523,-1077
chr18:13916186-13916558	chr18	+	13916205	13916543	True	NM_005913,NM_000529	chr18,chr18	+,-	MC5R,MC2R	-90713,-670
chr18:19194088-19195296	chr18	+	19194258	19195302	True	NM_006938,NM_052911	chr18,chr18	+,-	SNRPD1,ESCO1	-2060,-13565
chr1:42629741-42630041	chr1	+	42629784	42630024	True	NM_007102,NM_033553	chr1,chr1	+,-	GUCA2B,GUCA2A	-10743,421
chr19:43850118-43851331	chr19	+	43850715	43850847	True	NM_020406,NR_026881,NM_002784	chr19,chr19,chr19	+,+,-	CD177,PRG1,PSG9	6977,2360,-77033
chr10:121489179-121489712	chr10	+	121489383	121489623	True	NM_003252,NM_014937,NR_003251	chr10,chr10,chr10	-,+,+	TIAL1,INPP5F,INPP5F	-132842,-3826,-3826
chr4:55990080-55990910	chr4	+	55990134	55990943	True	NM_024592,NM_002253	chr4,chr4	+,-	SRD5A3,KDR	221444,869
chr17:38821183-38821695	chr17	+	38821194	38821512	True	NM_152349,NM_001195387	chr17,chr17	-,+	KRT222,TMEM99	40,153831
chrX:118921673-118923239	chrX	+	118922059	118923215	True	NM_001000,NR_002584,NM_001105576	chrX,chrX,chrX	-,-,+	RPL39,SNORA69,ANKRD58	2441,-612,-29543
chr1:247726443-247727326	chr1	+	247726461	247727242	True	NM_198074,NM_145278	chr1,chr1	-,+	OR2C3,C1orf150	-29320,-14065
chrX:1572974-1573185	chrY	+	1523148	1523234	False	NR_026711,NM_001173474,NM_001173473,NM_004192	chrY,chrY,chrY,chrY	+,-,-,-	ASMTL-AS1,ASMTL,ASMTL,ASMTL	-53775,-1278,-493,-1278
chrX:1572974-1573185	chrX	+	1573148	1573234	True	NR_026711,NM_001173474,NM_001173473,NM_004192	chrX,chrX,chrX,chrX	+,-,-,-	ASMTL-AS1,ASMTL,ASMTL,ASMTL	-53775,-1278,-493,-1278
chr3:166961345-166962921	chr3	+	166961482	166962926	True	NM_001122752,NM_001199202	chr3,chr3	+,-	SERPINI1,ZBBX	490505,135202
chr12:57881536-57881749	chr12	+	57881653	57881785	True	NM_032496,NM_004990,NM_001080157,NM_001080156	chr12,chr12,chr12,chr12	-,+,-,-	ARHGAP9,MARS,ARHGAP9,ARHGAP9	-8020,4,-8229,-9925
chr9:120477910-120478703	chr9	+	120477960	120478749	True	NR_024169,NM_014010	chr9,chr9	+,-	TLR4,ASTN2	-11551,-300643
chr13:32886937-32888707	chr13	+	32887885	32888645	True	NM_000059,NM_001136571	chr13,chr13	+,-	BRCA2,ZAR1L	971,-1794
chr2:68290318-68291016	chr2	+	68290418	68290856	True	NM_001190265,NM_173177,NM_006333,NM_001190263,NM_020143	chr2,chr2,chr2,chr2,chr2	-,-,-,-,+	C1D,C1D,C1D,C1D,PNO1	-259,-259,-259,-259,94148
chr16:23314672-23315094	chr16	+	23314728	23315004	True	NM_153603,NM_000336	chr16,chr16	-,+	COG7,SCNN1B	149568,-1188
chr6:160212077-160212709	chr6	+	160212130	160212643	True	NR_002965,NM_014161,NM_173516,NM_030752,NM_001008897	chr6,chr6,chr6,chr6,chr6	-,+,+,-,-	SNORA29,MRPL18,PNLDC1,TCP1,TCP1	-5365,-689,8657,-1395,-1395
chr21:43372920-43373157	chr21	+	43372934	43373152	True	NM_015500,NR_027273	chr21,chr21	-,+	C2CD2,C21orf121	897,68960
chr1:229752096-229753224	chr1	+	229752335	229753263	True	NM_001025247,NM_014409,NM_014777	chr1,chr1,chr1	-,-,+	TAF5L,TAF5L,URB2	8581,8581,8717
chr7:54831145-54832439	chr7	+	54831515	54832319	True	NM_182546,NM_001012456,NM_014302	chr7,chr7,chr7	+,-,-	VSTM2A,SEC61G,SEC61G	-221554,-4576,-4576
chr3:187453719-187454729	chr3	+	187453755	187454726	True	NM_001134738,NM_001130845,NM_001706,NR_034062	chr3,chr3,chr3,chr3	-,-,-,+	BCL6,BCL6,BCL6,LOC100131635	-1060,-54,8838,-33652
chr19:50921800-50922144	chr19	+	50921842	50921906	True	NM_003121,NM_004851	chr19,chr19	+,-	SPIB,NAPSA	288,-52911
chr1:62784982-62785899	chr1	+	62785175	62785584	True	NM_181712,NM_001017415	chr1,chr1	-,+	KANK4,USP1	-92,116390
chr7:44530344-44531566	chr7	+	44530459	44531577	True	NM_015332,NM_001003941	chr7,chr7	-,+	NUDCD3,OGDH	-74,114543
chr10:90968332-90969453	chr10	+	90968424	90969492	True	NM_003956,NM_001547	chr10,chr10	-,+	CH25H,IFIT2	-1353,92213
chr7:7609081-7609572	chr7	+	7609131	7609554	True	NM_001037763,NM_019005	chr7,chr7	-,+	COL28A1,MIOS	-33671,-2566
chr2:173297868-173298396	chr2	+	173297949	173298387	True	NR_026995,NM_000210,NM_001079818	chr2,chr2,chr2	-,+,+	LOC91149,ITGA6,ITGA6	302597,-5687,-5687
chr10:75010899-75012164	chr10	+	75011052	75011931	True	NM_173348,NM_015190,NM_016065	chr10,chr10,chr10	+,-,-	FAM149B1,DNAJC9,MRPS16	-83226,-4027,572
chr3:197881872-197882500	chr7	-	33102	33448	False	NM_002607,NM_020223	chr7,chr7	-,+	PDGFA,FAM20C	526090,159520
chr3:197881872-197882500	chr3	+	197881887	197882541	True	NR_003291	chr3	-	LOC348840	-74345
chr3:197881872-197882500	chr16	+	90170722	90170779	False	NM_001098173,NR_023348	chr16,chr16	-,+	PRDM7,GAS8	-28384,-81772
chr3:197881872-197882500	chr9	+	141109128	141109738	False	NM_032937	chr9	-	C9orf37	-595820
chr12:7821415-7822670	chr12	+	7821637	7822444	True	NM_001644,NM_199286	chr12,chr12	-,+	APOBEC1,DPPA3	-3135,41644
chr2:105952275-105952925	chr2	+	105952369	105952879	True	NM_001142621,NM_024093,NM_004257	chr2,chr2,chr2	-,+,-	TGFBRAP1,C2orf49,TGFBRAP1	-6221,1133,-6221
chr5:149492704-149493009	chr5	+	149492756	149493044	True	NM_005211,NM_001804	chr5,chr5	-,+	CSF1R,CDX1	-15,53299
chr4:78786202-78786636	chr4	+	78786334	78786573	True	NM_020236,NM_144571	chr4,chr4	+,-	MRPL1,CNOT6L	-2589,-45790
chr5:149376955-149377378	chr5	+	149377135	149377241	True	NM_014983,NM_030953	chr5,chr5	+,-	HMGXB3,TIGD6	2927,3026
chr2:241394904-241395205	chr2	+	241394919	241395244	True	NR_024014,NR_029702	chr2,chr2	-,+	PP14571,MIR149	923,173
chr17:46799720-46800532	chr17	+	46799722	46800477	True	NR_036150,NR_024103,NM_032391,NM_006361	chr17,chr17,chr17,chr17	-,+,-,-	MIR3185,NCRNA00253,PRAC,HOXB13	1410,64,36,5684
chr11:47469672-47470277	chr11	+	47469677	47470203	True	NM_152264,NM_032645,NM_005055	chr11,chr11,chr11	+,-,-	SLC39A13,RAPSN,RAPSN	-39682,577,577
chr5:161568133-161569741	chr5	+	161568468	161569303	True	NM_198904,NM_021911	chr5,chr5	+,-	GABRG2,GABRB2	-73882,-593338
chr1:1117841-1118074	chr1	+	1117843	1118111	True	NM_004195,NM_153254,NM_001130045	chr1,chr1,chr1	-,+,+	TNFRSF18,TTLL10,TTLL10	24028,-2817,-8608
chr12:71263823-71264362	chr12	+	71263841	71264411	True	NM_002849,NM_014505	chr12,chr12	-,+	PTPRR,KCNMB4	50229,-503830
chr13:81903587-81905348	chr13	+	81903756	81905287	True	NM_019080,NM_005842	chr13,chr13	+,-	NDFIP2,SPRY2	-1848557,-988670
chr6:150922024-150922225	chr6	+	150922060	150922208	True	NM_001029884,NM_024518	chr6,chr6	+,-	PLEKHG1,ULBP3	-1112,-531858
chr10:22660473-22661383	chr10	+	22660691	22661319	True	NM_172242,NR_036533	chr10,chr10	+,-	SPAG6,LOC100499489	-26349,65596
chr18:57568082-57568514	chr18	+	57568132	57568422	True	NM_133459,NM_021127	chr18,chr18	-,+	CCBE1,PMAIP1	-203488,-991
chr16:1538476-1538910	chr16	+	1538593	1538809	True	NM_001013658,NM_016111	chr16,chr16	-,+	PTX4,TELO2	-125,4542
chr17:37609332-37609849	chr17	+	37609455	37609898	True	NM_004774,NM_016507,NM_015083	chr17,chr17,chr17	-,+,+	MED1,CDK12,CDK12	-1928,7840,7840
chr1:227061207-227062214	chr1	+	227061392	227062205	True	NM_002221,NM_012486,NM_000447	chr1,chr1,chr1	-,+,+	ITPKB,PSEN2,PSEN2	-134516,-3170,-3170
chr1:170501356-170501718	chr1	+	170501396	170501690	True	NM_001146039,NM_152281,NR_027397,NR_026957	chr1,chr1,chr1,chr1	+,+,+,-	GORAB,GORAB,GORAB,LOC284688	-188,-188,-188,-248047
chr14:103784697-103785221	chr14	+	103784806	103785223	True	NR_033938,NM_001969	chr14,chr14	-,+	LOC100131366,EIF5	-129441,15269
chrX:71528083-71528350	chrX	+	71528104	71528372	True	NM_004143,NM_001170747,NM_001144885,NM_001144886,NM_001144887	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	CITED1,PIN4,CITED1,CITED1,CITED1	-1267,-126639,-2340,-1067,-2340
chr12:71004046-71004370	chr12	+	71004097	71004376	True	NM_002837,NM_014505	chr12,chr12	-,+	PTPRB,KCNMB4	-473,-244086
chr11:77000482-77002397	chr11	+	77000627	77002417	True	NM_182833,NM_001127180	chr11,chr11	-,+	GDPD4,MYO7A	-2164,-161362
chr8:82192918-82193143	chr8	+	82192918	82193154	True	NM_001444,NM_002677	chr8,chr8	+,-	FABP5,PMP2	-251,166615
chr4:140322113-140323626	chr4	+	140322306	140323598	True	NM_031296,NM_001184990	chr4,chr4	+,-	RAB33B,NDUFC1	51362,-98601
chr16:3543757-3544665	chr16	+	3544066	3544588	True	NM_015041,NM_001080524	chr16,chr16	+,-	CLUAP1,C16orf90	6374,883
chr15:71232349-71232754	chr15	+	71232399	71232559	True	NM_001199018,NM_020147	chr15,chr15	+,-	LRRC49,THAP10	-47442,-47627
chr22:32595597-32596005	chr22	+	32595615	32595795	True	NM_006605,NR_033411,NM_001098527,NM_001159546,NM_001159545	chr22,chr22,chr22,chr22,chr22	-,+,-,-,-	RFPL2,SLC5A1,RFPL2,RFPL2,RFPL2	-6149,-140509,3719,2792,4973
chr14:68285310-68286099	chr14	+	68285388	68285726	True	NM_133510,NM_015346,NM_133509,NM_002877	chr14,chr14,chr14,chr14	+,-,+,+	RAD51L1,ZFYVE26,RAD51L1,RAD51L1	769,-2082,769,769
chr22:25381505-25382009	chr22	+	25381616	25382036	True	NM_001001663,NM_001145206	chr22,chr22	-,+	TMEM211,KIAA1671	-46302,41904
chr19:1384340-1385302	chr19	+	1384582	1385143	True	NM_000156,NM_024407	chr19,chr19	-,+	GAMT,NDUFS7	16460,-751
chr6:53887887-53888490	chr6	+	53888021	53888318	True	NM_138569,NM_001003760	chr6,chr6	+,-	C6orf142,KLHL31	-4367,-357515
chr11:124766939-124767779	chr11	+	124767225	124767737	True	NM_019055,NM_001037558	chr11,chr11	-,+	ROBO4,HEPN1	144,21408
chr13:46758738-46760706	chr13	+	46758873	46760044	True	NM_002298,NM_001164211	chr13,chr13	-,+	LCP1,LRCH1	-2414,367251
chr13:114564913-114565313	chr13	+	114564955	114565339	True	NM_000820,NR_024609	chr13,chr13	-,+	GAS6,FLJ44054	1757,21270
chr6:14885369-14885885	chr6	+	14885719	14885836	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	360690,777504
chr12:48393845-48395385	chr12	+	48394105	48395160	True	NM_024056,NM_033150,NM_001844	chr12,chr12,chr12	+,-,-	TMEM106C,COL2A1,COL2A1	-36839,3175,3175
chr12:59315093-59315964	chr12	+	59315167	59315765	True	NM_004731,NM_153377,NM_001136051	chr12,chr12,chr12	+,-,-	SLC16A7,LRIG3,LRIG3	767360,-905,-1840
chr10:44287259-44288041	chr10	+	44287414	44288008	True	NR_033923,NR_002726	chr10,chr10	+,-	C10orf136,HNRNPA3P1	52745,-1549
chr18:76742736-76743829	chr18	+	76742735	76743789	True	NM_001146343,NM_171999	chr18,chr18	-,+	PQLC1,SALL3	967922,-2516
chr7:123340152-123340584	chr7	+	123340381	123340502	True	NM_207163,NM_003941	chr7,chr7	+,-	LMOD2,WASL	-44583,48667
chr1:153959914-153960926	chr1	+	153960011	153960350	True	NM_002870,NM_006694,NM_001030	chr1,chr1,chr1	-,-,+	RAB13,JTB,RPS27	-1205,-9560,2888
chr22:17648252-17649349	chr22	+	17648344	17648882	True	NM_033070,NM_017829,NR_024482,NR_024483	chr22,chr22,chr22,chr22	-,-,+,+	CECR5,CECR5,CECR4,CECR4	-8175,-2167,-8116,-8116
chr4:17925191-17926066	chr4	+	17925367	17925738	True	NM_153686,NM_022346	chr4,chr4	-,+	LCORL,NCAPG	97802,-112893
chr19:15236618-15237738	chr19	+	15236678	15237600	True	NM_006844,NM_033025	chr19,chr19	-,+	ILVBL,SYDE1	-101,-18515
chr2:70189109-70190731	chr2	+	70189358	70190780	True	NM_152792,NM_002357	chr2,chr2	-,+	ASPRV1,MXD1	39,-47238
chr10:38248933-38249262	chr10	+	38249019	38249196	True	NM_145011,NM_006954	chr10,chr10	-,+	ZNF25,ZNF33A	16320,50381
chr17:76129220-76129455	chr17	+	76129292	76129454	True	NM_007267,NM_001127198,NM_152468	chr17,chr17,chr17	-,-,+	TMC6,TMC6,TMC8	-804,-4431,-2484
chr17:47306074-47306799	chr17	+	47306422	47306796	True	NM_001143804,NM_016428,NM_178500,NR_034161	chr17,chr17,chr17,chr17	-,+,-,+	PHOSPHO1,ABI3,PHOSPHO1,FLJ40194	1382,-18890,1382,18808
chr19:45909420-45909862	chr19	+	45909440	45909759	True	NM_001142502,NM_012099,NM_006663	chr19,chr19,chr19	-,+,-	PPP1R13L,CD3EAP,PPP1R13L	45,-24,-1128
chr9:125589933-125590154	chr9	+	125590030	125590193	True	NM_080859,NM_005388	chr9,chr9	+,-	OR1K1,PDCL	-27679,793
chr7:150972556-150973158	chr7	+	150972771	150973083	True	NM_001003802,NR_030407,NM_003078	chr7,chr7,chr7	-,+,-	SMARCD3,MIR671,SMARCD3	787,-37315,1198
chr11:59383522-59383868	chr11	+	59383523	59383863	True	NM_001004711,NM_002556	chr11,chr11	+,-	OR4D9,OSBP	-101188,0
chr8:103563178-103563904	chr8	+	103563177	103563949	True	NM_024410,NM_001032282	chr8,chr8	+,-	ODF1,KLF10	45,102269
chr19:4540331-4541012	chr19	+	4540393	4540880	True	NM_052972,NM_032631,NM_001013706	chr19,chr19,chr19	-,+,-	LRG1,HDGFRP2,PLIN5	-357,-68190,-5185
chr5:24263811-24265266	chr5	+	24264000	24265268	True	NM_020227,NM_006727	chr5,chr5	+,-	PRDM9,CDH10	-756327,379868
chr20:61145644-61146284	chr20	+	61145807	61146325	True	NR_033263,NR_029780,NM_178463	chr20,chr20,chr20	-,+,+	C20orf200,MIR1-1,C20orf166	2493,5187,1334
chr1:145508269-145509195	chr1	+	145508279	145509108	True	NR_002328,NM_005105,NM_003846,NM_001184795	chr1,chr1,chr1,chr1	-,+,+,+	GNRHR2,RBM8A,PEX11B,PEX11B	7019,-773,7056,7451
chr15:75198047-75198695	chr15	+	75198155	75198716	True	NM_002435,NM_020447	chr15,chr15	+,-	MPI,C15orf17	-15796,796
chrX:13714463-13715129	chrX	+	13714552	13715138	True	NM_001011658,NM_001195328,NM_004251	chrX,chrX,chrX	-,+,+	TRAPPC2,RAB9A,RAB9A	37666,-7370,-7370
chr16:68571559-68572108	chr16	+	68571708	68572161	True	NM_133458,NM_018667	chr16,chr16	+,-	ZFP90,SMPD3	1499,-89299
chr22:20194146-20194545	chr22	+	20194169	20194581	True	NR_026919,NR_031618	chr22,chr22	+,-	LOC150197,MIR1286	-370,42203
chr22:26567011-26568790	chr22	+	26567172	26568826	True	NM_021115,NM_001184773,NM_001184776,NM_001184777,NM_001184774,NM_001184775,NM_152841	chr22,chr22,chr22,chr22,chr22,chr22,chr22	+,+,+,+,+,+,-	SEZ6L,SEZ6L,SEZ6L,SEZ6L,SEZ6L,SEZ6L,HPS4	-1783,-1783,-1783,-1783,-1783,-1783,306775
chr16:72043604-72044694	chr16	+	72043938	72044580	True	NM_001361,NM_181536	chr16,chr16	+,-	DHODH,PKD1L3	-1354,-10061
chr14:96127271-96128265	chr14	+	96127334	96127973	True	NM_001098725,NR_028288	chr14,chr14	-,+	TCL1A,TCL6	52617,-9871
chr15:100885070-100886960	chr15	+	100885081	100886853	True	NR_028140,NM_024708,NM_139057,NR_028139	chr15,chr15,chr15,chr15	-,+,-,-	FLJ42289,ASB7,ADAMTS17,FLJ42289	3635,255901,-2898,4120
chr1:160599242-160599769	chr1	+	160599289	160599740	True	NM_021181,NM_003037	chr1,chr1	+,-	SLAMF7,SLAMF1	109336,17392
chr2:175499375-175500130	chr2	+	175499374	175500042	True	NM_003387,NM_024583	chr2,chr2	-,+	WIPF1,SCRN3	-67,-238968
chrX:100662488-100662902	chrX	+	100662508	100662948	True	NM_001032393,NM_019597,NM_000169	chrX,chrX,chrX	+,+,-	HNRNPH2,HNRNPH2,GLA	172,172,103
chrX:74145439-74145682	chrX	+	74145586	74145728	True	NM_145052,NM_001008537	chrX,chrX	+,-	UPRT,KIAA2022	348165,-299
chrX:53254729-53254957	chrX	+	53254788	53254852	True	NM_004187,NM_022117,NM_001146702	chrX,chrX,chrX	-,+,-	KDM5C,TSPYL2,KDM5C	-184,-143297,-184
chr7:76104044-76104482	chr7	+	76104061	76104281	True	NR_003262,NM_001102596	chr7,chr7	-,+	FDPSL2A,DTX2	86,5545
chr7:76104044-76104482	chr7	+	76602153	76602204	False	NR_023383,NM_006682	chr7,chr7	+,-	PMS2P11,FGL2	7934,226997
chr19:55136185-55137178	chr19	+	55136444	55137068	True	NM_006669,NM_001081639,NM_001081638,NM_001081637,NM_145057	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	LILRB1,LILRB1,LILRB1,LILRB1,CDC42EP5	-7866,4839,4839,4899,-152022
chr19:55136185-55137178	chr19	-	54789697	54789750	False	NM_001013,NM_005874,NM_001080978	chr19,chr19,chr19	+,-,-	RPS9,LILRB2,LILRB2	-85025,-4664,-4664
chr10:46008196-46009862	chr10	+	46008725	46009739	True	NM_001002266,NM_000698	chr10,chr10	-,+	MARCH8,ALOX5	21130,-139158
chr3:113465177-113465581	chr3	+	113465367	113465553	True	NM_001690,NM_025146	chr3,chr3	+,-	ATP6V1A,NAA50	312,-247
chr11:66511625-66511873	chr11	+	66511719	66511920	True	NM_024650,NM_006946	chr11,chr11	+,-	C11orf80,SPTBN2	286,-22849
chr20:62584977-62585445	chr20	+	62585107	62585485	True	NM_017859,NM_001193379,NR_027287	chr20,chr20,chr20	-,-,+	UCKL1,UCKL1,UCKL1-AS1	2365,-2580,-421
chr16:11441796-11443284	chr16	+	11442013	11443287	True	NM_152308,NM_002761	chr16,chr16	+,-	C16orf75,PRM1	-2754,-66821
chr3:64211016-64212460	chr3	+	64211121	64212390	True	NM_198859,NM_001128149	chr3,chr3	-,+	PRICKLE2,ATXN7	10,-257752
chr1:153958961-153959702	chr1	+	153958962	153959662	True	NM_002870,NM_006694,NM_001030	chr1,chr1,chr1	-,-,+	RAB13,JTB,RPS27	-156,-8511,3576
chr6:14695692-14695937	chr6	+	14695719	14695961	True	NM_001031713,NM_004973	chr6,chr6	-,+	CCDC90A,JARID2	-880930,550565
chr1:28971278-28971593	chr1	+	28971354	28971434	True	NM_001135218,NM_005644,NR_004407	chr1,chr1,chr1	-,-,+	TAF12,TAF12,RNU11	-1750,-1750,3677
chr1:224808421-224808666	chr1	+	224808603	224808707	True	NM_152495,NM_025160	chr1,chr1	+,-	CNIH3,WDR26	-4487,-186602
chr10:30664228-30665299	chr10	+	30664419	30664912	True	NR_003524,NM_005204	chr10,chr10	-,+	LOC729668,MAP3K8	-1042,57953
chr2:29145470-29146262	chr2	+	29145487	29146262	True	NM_017910,NR_003074,NR_002741	chr2,chr2,chr2	-,+,+	TRMT61B,SNORD92,SNORD53	-52312,-9011,3670
chr16:89639559-89639937	chr16	+	89639702	89639932	True	NM_013275,NM_153636,NM_014427	chr16,chr16,chr16	-,+,+	ANKRD11,CPNE7,CPNE7	-82733,2243,2243
chr14:67661313-67662551	chr14	+	67661708	67662335	True	NM_173526,NM_015994	chr14,chr14	+,-	FAM71D,ATP6V1D	-5649,164448
chr1:173640943-173642358	chr1	+	173641039	173642116	True	NM_001195190,NM_198493	chr1,chr1	+,-	LOC730159,ANKRD45	-36430,-2038
chr2:64680428-64681108	chr2	+	64680443	64680989	True	NM_014755,NM_014181	chr2,chr2	-,+	SERTAD2,HSPC159	200107,337
chr19:54134709-54135295	chr19	+	54134719	54135336	True	NM_001012728,NR_002938	chr19,chr19	+,-	DPRX,LOC284379	-27,-27968
chr18:44335107-44335523	chr18	+	44335136	44335568	True	NM_013305,NM_031303	chr18,chr18	-,+	ST8SIA5,KATNAL2	1521,191218
chr5:145824092-145825491	chr5	+	145824230	145825387	True	NM_006706,NM_001040006,NM_194251	chr5,chr5,chr5	+,+,-	TCERG1,TCERG1,GPR151	1485,1485,70349
chrX:74633422-74634387	chrX	+	74633672	74634218	True	NM_001146256,NR_030774	chrX,chrX	-,+	ZDHHC15,UPRT	109181,-139829
chr4:91128296-91129179	chr4	+	91128409	91128987	True	NM_001146055,NM_207491	chr4,chr4	-,+	SNCA,FAM190A	-368962,27194
chr21:45756890-45758520	chr21	+	45757284	45758451	True	NM_003307,NM_004928	chr21,chr21	+,-	TRPM2,C21orf2	15032,884
chr10:71390338-71390939	chr10	+	71390368	71390964	True	NM_020999,NM_145306	chr10,chr10	-,+	NEUROG3,C10orf35	-57158,-416
chr19:33199187-33199461	chr19	+	33199367	33199509	True	NM_001110822,NM_032139	chr19,chr19	+,-	TDRD12,ANKRD27	11169,-33265
chr11:308471-308686	chr11	+	308517	308735	True	NM_006435,NM_003641,NM_001025295	chr11,chr11,chr11	+,+,-	IFITM2,IFITM1,IFITM5	-461,5255,-8991
chr11:308471-308686	chr11	-	320267	320317	False	NM_021034,NM_003641	chr11,chr11	-,+	IFITM3,IFITM1	647,-6327
chr2:240117174-240118234	chr2	+	240117199	240118180	True	NR_036229,NR_026664	chr2,chr2	+,-	MIR4269,MGC16025	108976,-46
chr15:89880112-89880855	chr15	+	89880366	89880646	True	NM_001126131,NR_029692,NM_002693	chr15,chr15,chr15	-,+,-	POLG,MIR9-3,POLG	-2340,30601,-2340
chr6:161580797-161582250	chr6	+	161581257	161582211	True	NM_006724,NR_024277	chr6,chr6	+,-	MAP3K4,NCRNA00241	-168486,853
chr14:20438009-20438833	chr14	+	20438418	20438846	True	NM_001004712,NM_001005486	chr14,chr14	-,+	OR4K14,OR4K15	44556,4831
chr10:14928489-14930354	chr10	+	14928535	14930127	True	NM_001029954,NR_034181,NM_024670,NM_001193426,NM_001193427,NM_001193424,NM_001193425	chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,+,+,+,+,+,+	CDNF,SUV39H2,SUV39H2,SUV39H2,SUV39H2,SUV39H2,SUV39H2	-48552,-7804,-7687,-7804,-7721,-7804,-7721
chr9:34182341-34183397	chr9	+	34182466	34183276	True	NR_033243,NM_016525,NM_015397,NM_001171204,NM_001171202,NM_001171203,NM_001171201	chr9,chr9,chr9,chr9,chr9,chr9,chr9	+,+,-,+,+,+,+	UBAP1,UBAP1,DCAF12,UBAP1,UBAP1,UBAP1,UBAP1	-3514,-3514,-55695,-3514,-3514,-3514,-3514
chr10:10834365-10836300	chr10	+	10834569	10836219	True	NR_027082,NM_001025077	chr10,chr10	-,+	SFTA1P,CELF2	711,211039
chr15:65668405-65668657	chr15	+	65668445	65668695	True	NM_004884,NM_016395	chr15,chr15	-,+	IGDCC3,PTPLAD1	1733,154131
chr1:203734466-203735467	chr1	+	203734532	203735252	True	NM_017773,NR_027902,NM_001136190	chr1,chr1,chr1	+,-,+	LAX1,C1orf157,LAX1	-299,275198,-299
chr4:141467476-141468613	chr4	+	141467823	141468654	True	NM_021833,NM_153702	chr4,chr4	-,+	UCP1,ELMOD2	21360,-22562
chr3:159046885-159047163	chr3	+	159046912	159047192	True	NM_002888,NR_037483	chr3,chr3	-,+	RARRES1,MIR3919	-596637,-46529
chr16:86773484-86773955	chr16	+	86773492	86773950	True	NM_005250,NR_027490	chr16,chr16	+,-	FOXL1,MTHFSD	-161428,-184651
chr10:17683773-17684852	chr10	+	17683820	17684806	True	NM_003473,NM_014241,NR_037774	chr10,chr10,chr10	+,-,+	STAM,PTPLA,STAM	1317,-24447,1317
chr7:96634732-96635253	chr7	+	96634746	96634938	True	NM_005222,NR_015448	chr7,chr7	+,-	DLX6,DLX6-AS1	351,8489
chr1:117601634-117602703	chr1	+	117601652	117602638	True	NM_003594,NM_001145635	chr1,chr1	+,-	TTF2,TRIM45	310,61823
chr2:136589399-136589640	chr2	+	136589414	136589487	True	NM_002299,NM_014607	chr2,chr2	-,+	LCT,UBXN4	5314,-90276
chr2:164591728-164592792	chr2	+	164591776	164592408	True	NM_012198,NM_018086	chr2,chr2	+,-	GCA,FIGN	-1391244,155
chr12:5602667-5603178	chr12	+	5602674	5603166	True	NM_020373,NM_002527	chr12,chr12	-,+	ANO2,NTF3	452282,131
chr1:36042280-36042774	chr1	+	36042318	36042704	True	NM_178548,NM_024874	chr1,chr1	+,-	TFAP2E,KIAA0319L	-3398,-19281
chr5:150599135-150599710	chr5	+	150599153	150599706	True	NM_000405,NM_015621	chr5,chr5	+,-	GM2A,CCDC69	32906,3998
chr18:11911400-11911883	chr18	+	11911584	11911796	True	NM_023075,NM_020412	chr18,chr18	-,+	MPPE1,CHMP1B	-2943,-60256
chr16:68482819-68483214	chr16	+	68482827	68483101	True	NM_133458,NM_018667	chr16,chr16	+,-	ZFP90,SMPD3	90559,-418
chr19:4970565-4970909	chr19	+	4970586	4970842	True	NM_015015,NM_001080523	chr19,chr19	+,-	KDM4B,ARRDC5	-1513,-67707
chr4:84375211-84375721	chr4	+	84375396	84375574	True	NM_133636,NM_016067	chr4,chr4	-,+	HELQ,MRPS18C	1509,1543
chr9:19291625-19292368	chr9	+	19291731	19292380	True	NM_001010,NM_017925	chr9,chr9	-,+	RPS6,DENND4C	87905,-1040
chr5:175975598-175976209	chr5	+	175975836	175975983	True	NM_014901,NM_017675,NM_001171976	chr5,chr5,chr5	-,+,+	RNF44,CDHR2,CDHR2	-11415,359,-6375
chr2:158982092-158982530	chr2	+	158982238	158982562	True	NM_001111067,NM_173355	chr2,chr2	-,+	ACVR1,UPP2	-249864,-23917
chr5:33885496-33887091	chr5	+	33885688	33887118	True	NM_016568,NM_030955	chr5,chr5	+,-	RXFP3,ADAMTS12	49372,5056
chr17:6868386-6870280	chr17	+	6868461	6869954	True	NM_000697,NR_029712	chr17,chr17	+,-	ALOX12,MIR195	29429,51123
chr12:50452287-50452591	chr12	+	50452342	50452624	True	NM_020039,NM_001095,NM_013277	chr12,chr12,chr12	+,+,-	ACCN2,ACCN2,RACGAP1	-906,-906,-33035
chr17:79008121-79008328	chr17	+	79008157	79008247	True	NM_001144888,NR_026857,NM_017450,NM_017451,NM_006340	chr17,chr17,chr17,chr17,chr17	+,-,+,+,+	BAIAP2,FLJ90757,BAIAP2,BAIAP2,BAIAP2	699,322,699,699,699
chr8:42013984-42014211	chr8	+	42014016	42014254	True	NM_006803,NM_001134296,NM_000930	chr8,chr8,chr8	+,+,-	AP3M2,AP3M2,PLAT	-3610,-3610,50997
chr19:56880584-56880882	chr19	+	56880629	56880900	True	NR_003127,NM_144690,NR_024057,NR_024056,NR_024055,NR_033418	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+	ZNF542,ZNF582,ZNF542,ZNF542,ZNF542,ZNF542	-1212,24040,-1190,-1190,-1190,-1190
chr8:26436704-26436955	chr8	+	26436761	26436991	True	NM_001386,NM_007257	chr8,chr8	+,-	DPYSL2,PNMA2	-1391,-65278
chr17:36906534-36906859	chr17	+	36906544	36906784	True	NM_007144,NM_002795	chr17,chr17	-,+	PCGF2,PSMB3	-1986,2217
chr11:107988242-107989390	chr11	+	107988371	107989443	True	NM_000019,NM_002519	chr11,chr11	+,-	ACAT1,NPAT	2814,103977
chr2:27710105-27711111	chr2	+	27710112	27710802	True	NM_022823,NM_015662,NM_001486	chr2,chr2,chr2	-,-,+	FNDC4,IFT172,GCKR	7384,1829,8903
chr15:75942234-75942480	chr15	+	75942240	75942502	True	NM_153271,NM_018285	chr15,chr15	+,-	SNX33,IMP3	-943,-9576
chr1:214776128-214776390	chr1	+	214776186	214776426	True	NM_016343,NM_005401	chr1,chr1	+,-	CENPF,PTPN14	105,-51162
chr1:223537078-223537342	chr1	+	223537141	223537391	True	NM_017982,NM_152610,NM_001037175	chr1,chr1,chr1	-,+,-	SUSD4,C1orf65,SUSD4	203,29323,203
chr19:3800062-3800346	chr19	+	3800222	3800346	True	NM_172251,NM_002378	chr19,chr19	+,-	MRPL54,MATK	-37619,1514
chr19:4791473-4791697	chr19	+	4791474	4791736	True	NM_182919,NM_018708	chr19,chr19	-,+	TICAM1,FEM1A	40051,-9
chr11:92704420-92706319	chr11	+	92704451	92706307	True	NM_152313,NM_005959	chr11,chr11	-,+	SLC36A4,MTNR1B	224838,-1723
chr16:20551858-20552210	chr16	+	20552045	20552159	True	NM_001105069,NM_001010845	chr16,chr16	-,+	ACSM2B,ACSM2A	35590,-89237
chr7:153584335-153585227	chr7	+	153584537	153584733	True	NM_007349,NM_001039350	chr7,chr7	-,+	PAXIP1,DPP6	1210001,-169
chr10:30963593-30964669	chr10	+	30963851	30964624	True	NM_183058,NM_005204	chr10,chr10	-,+	LYZL2,MAP3K8	-45204,-241039
chr10:30963593-30964669	chr10	-	29797177	29797227	False	NR_030335,NR_003930	chr10,chr10	-,+	MIR604,LOC387647	36849,-98727
chr10:62704904-62705127	chr10	+	62704922	62705174	True	NM_033379,NR_024556,NM_014836	chr10,chr10,chr10	+,-,-	CDK1,RHOBTB1,RHOBTB1	-166763,-889,-889
chr10:121297833-121298894	chr10	+	121297880	121298875	True	NM_001005339,NM_002925,NM_004281	chr10,chr10,chr10	-,-,+	RGS10,RGS10,BAG3	3397,-1835,112006
chr9:35731324-35731980	chr9	+	35731351	35731965	True	NM_006289,NM_006368	chr9,chr9	-,+	TLN1,CREB3	477,351
chr16:28943303-28943549	chr16	+	28943369	28943561	True	NM_024816,NM_001770,NM_001178098	chr16,chr16,chr16	-,+,+	RABEP2,CD19,CD19	-6837,-160,-160
chr6:35523753-35525230	chr6	+	35524884	35525212	True	NM_003322,NM_007104	chr6,chr6	-,+	TULP1,RPL10A	-44237,-88764
chr12:18449902-18451610	chr12	+	18449901	18450682	True	NM_004570,NM_024730	chr12,chr12	+,-	PIK3C2G,RERGL	-35479,-206787
chr16:84651829-84652256	chr16	+	84652151	84652305	True	NM_024731,NM_021149	chr16,chr16	+,-	KLHL36,COTL1	29825,-482
chr3:113883689-113884200	chr3	+	113883880	113884149	True	NM_000796,NM_024638	chr3,chr3	-,+	DRD3,QTRTD1	13811,-108330
chr14:70883881-70884103	chr14	+	70884070	70884138	True	NM_001202548,NM_001202549,NM_001202547,NM_003813,NM_018373	chr14,chr14,chr14,chr14,chr14	-,-,-,+,-	SYNJ2BP-COX16,SYNJ2BP-COX16,SYNJ2BP-COX16,ADAM21,SYNJ2BP	-263,-263,-263,40078,-263
chr22:30751293-30752223	chr22	+	30751582	30752144	True	NM_001005409,NM_005877,NM_001017437	chr22,chr22,chr22	-,-,+	SF3A1,SF3A1,CCDC157	819,819,482
chr1:211756424-211757173	chr1	+	211756451	211757195	True	NM_021194,NR_026761	chr1,chr1	-,+	SLC30A1,C1orf97	-4352,-200405
chr12:6580376-6580713	chr12	+	6580389	6580673	True	NM_018009,NM_014231,NM_016830,NM_199245	chr12,chr12,chr12,chr12	+,-,-,-	TAPBPL,VAMP1,VAMP1,VAMP1	-19263,-546,-546,-546
chr19:11708605-11708827	chr19	+	11708696	11708849	True	NM_001111036,NM_145295	chr19,chr19	-,+	ACP5,ZNF627	-18895,-512
chr16:31190841-31191082	chr16	+	31190891	31190961	True	NM_004960,NM_001170937,NM_013258,NM_001170634,NR_028388	chr16,chr16,chr16,chr16,chr16	+,+,-,+,+	FUS,FUS,PYCARD,FUS,FUS	469,469,23186,469,469
chr8:100910726-100911120	chr8	+	100910756	100910924	True	NM_004374,NM_005034	chr8,chr8	-,+	COX6C,POLR2K	-4514,251914
chr1:50489238-50489613	chr1	+	50489299	50489591	True	NM_032785,NM_001144777	chr1,chr1	-,+	AGBL4,ELAVL4	85,24094
chr4:123179898-123180869	chr4	+	123179907	123180524	True	NM_000586,NM_015312	chr4,chr4	-,+	IL2,KIAA1109	197177,-88200
chr14:55520477-55521154	chr14	+	55520485	55521196	True	NM_007086,NM_144578	chr14,chr14	-,+	WDHD1,MAPK1IP1L	-26666,-2174
chr1:113711589-113711990	chr1	+	113711631	113712031	True	NM_003051,NM_014813	chr1,chr1	-,+	SLC16A1,LRIG2	-212656,-95851
chr2:198296359-198296839	chr2	+	198296359	198296481	True	NM_025147,NM_001005526,NM_012433	chr2,chr2,chr2	+,-,-	COQ10B,SF3B1,SF3B1	21749,3344,3344
chr5:5421546-5422227	chr5	+	5421578	5422146	True	NM_015325,NR_028351	chr5,chr5	+,-	KIAA0947,FLJ33360	660,915309
chr11:102217586-102217799	chr11	+	102217600	102217748	True	NM_001166,NM_052932	chr11,chr11	+,-	BIRC2,TMEM123	217,106077
chr9:41954487-41954704	chr9	+	41954492	41954752	True	NR_015363,NM_001012421	chr9,chr9	-,+	MGC21881,ANKRD20A2	374,413550
chr9:41954487-41954704	chr9	-	66553758	66553814	False	NR_024443,NR_024496	chr9,chr9	-,+	LOC100133920,LOC442421	477218,-59540
chrX:43726472-43728248	chrX	+	43726583	43728291	True	NM_000898,NM_000240	chrX,chrX	-,+	MAOB,MAOA	13487,-211226
chr2:220493956-220494886	chr2	+	220494278	220494852	True	NM_001173408,NM_005070,NM_201574	chr2,chr2,chr2	-,+,+	OBSL1,SLC4A3,SLC4A3	-58010,-2037,-2037
chr17:58212656-58212900	chr17	+	58212670	58212878	True	NM_000717,NR_027408	chr17,chr17	+,-	CA4,LOC653653	14423,-32390
chr1:24740829-24741183	chr1	+	24740867	24741026	True	NM_020448,NM_001199013,NM_001199012,NM_001199014,NM_178122	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	NIPAL3,C1orf201,C1orf201,C1orf201,C1orf201	1218,-605,612,-605,-605
chr20:13762817-13764316	chr20	+	13762817	13764206	True	NM_001039375,NR_029377,NM_024120,NM_016649	chr20,chr20,chr20,chr20	+,+,+,-	C20orf7,C20orf7,C20orf7,ESF1	1465,1465,1465,1376
chr13:52599434-52600627	chr13	+	52599557	52600377	True	NM_001005918,NM_021645	chr13,chr13	-,+	ATP7B,UTP14C	-13927,-788
chr14:24579956-24580348	chr14	+	24579961	24580331	True	NM_001163484,NM_181357,NR_028100,NM_006177,NM_025230,NR_028099	chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,-,+,+	DCAF11,DCAF11,DCAF11,NRL,DCAF11,DCAF11	3574,4162,4160,-26129,3654,3654
chr16:56553628-56553842	chr16	+	56553647	56553855	True	NM_031885,NM_032935	chr16,chr16	-,+	BBS2,MT4	203,45105
chr15:25460943-25461844	chr15	+	25461109	25461859	True	NR_003315,NR_003314,NR_003313,NR_003495,NR_003496,NR_003497,NR_003307,NR_022010,NR_003358,NR_003344,NR_003345,NR_003351,NM_130838,NR_003342,NR_003343,NR_003303,NR_003312	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,+,+,+,-,+,+,+,+	SNORD115-23,SNORD115-22,SNORD115-21,SNORD115-24,HBII-52-27,HBII-52-28,SNORD115-15,PAR4,SNORD115-43,SNORD115-29,SNORD115-30,SNORD115-36,UBE3A,SNORD115-25,SNORD115-26,SNORD115-11,SNORD115-20	-4217,-6095,-9751,-2354,3790,5641,-9751,-4321,6533,6533,8490,6533,188844,-472,1904,6533,-9751
chr1:43300094-43300317	chr1	+	43300112	43300216	True	NM_018538,NM_199342	chr1,chr1	+,-	ERMAP,CCDC23	-8924,-17053
chr3:41238543-41240228	chr3	+	41238832	41240200	True	NM_001098209,NM_001098210,NM_017886,NM_001904	chr3,chr3,chr3,chr3	+,+,-,+	CTNNB1,CTNNB1,ULK4,CTNNB1	741,741,763510,741
chr22:42525478-42525696	chr22	+	42525482	42525724	True	NM_001025161,NM_000106,NR_034118	chr22,chr22,chr22	-,-,+	CYP2D6,CYP2D6,LOC100132273	1209,1209,-38596
chr10:1777289-1777767	chr10	+	1777303	1777819	True	NR_033387,NM_018702	chr10,chr10	+,-	NCRNA00168,ADARB2	-208529,1956
chr7:24610413-24610670	chr7	+	24610459	24610689	True	NM_016447,NM_001127453	chr7,chr7	+,-	MPP6,DFNA5	2395,186444
chr11:125441492-125443067	chr11	+	125441823	125442712	True	NM_001007277,NM_022549,NM_004879	chr11,chr11,chr11	+,-,+	EI24,FEZ1,EI24	-2577,-75617,-2577
chr6:167654946-167655222	chr6	+	167655008	167655248	True	NM_005299,NM_001143947	chr6,chr6	-,+	GPR31,UNC93A	-83689,49554
chr6:167654946-167655222	chr6	-	167680252	167680416	False	NM_005299,NM_001143947	chr6,chr6	-,+	GPR31,UNC93A	-108933,24386
chr6:137480753-137481743	chr6	+	137480817	137481712	True	NM_052962,NM_001008783	chr6,chr6	-,+	IL22RA2,SLC35D3	13130,-237466
chr10:7452534-7452776	chr10	+	7452543	7452784	True	NM_002216,NM_001018039,NM_001029880	chr10,chr10,chr10	+,-,-	ITIH2,SFMBT2,SFMBT2	292451,-1240,714
chr2:71204699-71205518	chr2	+	71204995	71205322	True	NM_144582,NM_024933,NM_001115116	chr2,chr2,chr2	-,+,+	TEX261,ANKRD53,ANKRD53	16736,252,252
chr19:51528447-51529243	chr19	+	51528651	51529181	True	NM_145894,NM_145895,NM_019598,NM_002776,NM_001136032,NM_145888,NM_001077500,NM_001167605,NM_006853,NM_144947,NM_014441	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,-,-,-,+	KLK12,KLK12,KLK12,KLK10,KLK11,KLK10,KLK10,KLK11,KLK11,KLK11,SIGLEC9	9017,9017,9017,-5369,741,-5697,-5220,2159,2159,1754,98955
chr11:104948693-104949682	chr11	+	104949070	104949711	True	NM_001077244,NM_001223	chr11,chr11	+,-	GRIA4,CASP1	531088,22504
chr5:272274-272914	chr5	+	272346	272864	True	NM_145265,NM_013232	chr5,chr5	-,+	CCDC127,PDCD6	-54049,-661
chr5:272274-272914	chr5	-	1632982	1633394	False	NR_003713,NM_004553	chr5,chr5	-,+	LOC728613,NDUFS6	776,168101
chr19:55235239-55235990	chr19	+	55235533	55235923	True	NM_153443,NM_001127255	chr19,chr19	+,-	KIR3DL3,NLRP7	60,223000
chr16:30217741-30218077	chr16	+	30217818	30218026	True	NR_002556,NR_002557,NM_001017390,NM_177552	chr16,chr16,chr16,chr16	-,-,+,+	LOC388242,LOC613038,SULT1A4,SULT1A3	272,272,-7320,-7320
chr16:30217741-30218077	chr16	+	29478469	29478677	False	NR_002556,NR_002557,NM_001017390,NM_177552	chr16,chr16,chr16,chr16	-,-,+,+	LOC388242,LOC613038,SULT1A4,SULT1A3	272,272,-7313,-7313
chr16:29802813-29803204	chr16	+	29802816	29803228	True	NM_175900,NM_007317	chr16,chr16	-,+	C16orf54,KIF22	-45476,-809
chr14:24108764-24109266	chr14	+	24108945	24109307	True	NM_032452,NM_005794,NM_182908	chr14,chr14,chr14	-,+,+	JPH4,DHRS2,DHRS2	-60936,-3423,-3423
chr20:36890822-36892442	chr20	+	36890934	36892287	True	NM_001029864,NM_001725	chr20,chr20	-,+	KIAA1755,BPI	-1760,40264
chr3:51989965-51990183	chr3	+	51989982	51990096	True	NM_033010,NM_080865	chr3,chr3	-,+	PCBP4,GPR62	6862,-703
chr1:93250870-93251201	chr1	+	93251058	93251236	True	NM_005665,NM_000969	chr1,chr1	-,+	EVI5,RPL5	6775,46357
chr15:82548239-82548499	chr15	+	82548306	82548506	True	NM_024580,NM_001008226,NM_001040610	chr15,chr15,chr15	-,+,-	EFTUD1,FAM154B,EFTUD1	6648,6645,6648
chr11:5775145-5776641	chr11	+	5775921	5776655	True	NM_001001922,NM_001005175	chr11,chr11	-,+	OR52N5,OR52N4	23292,-58
chr1:186344788-186344996	chr1	+	186344884	186345010	True	NM_017847,NM_001164245,NM_001164246,NM_003292	chr1,chr1,chr1,chr1	+,+,+,-	C1orf27,C1orf27,C1orf27,TPR	-45,-45,-45,-427
chr9:140095741-140096125	chr9	+	140095807	140096106	True	NM_001128228,NM_001144028,NM_001144026,NM_001144027,NM_053045,NM_014434	chr9,chr9,chr9,chr9,chr9,chr9	-,+,+,+,-,+	TPRN,NDOR1,NDOR1,NDOR1,TMEM203,NDOR1	-644,4012,4012,4012,4034,4012
chr19:41940765-41941265	chr19	+	41940924	41940991	True	NM_001167869,NM_001167868,NM_198540,NM_018035,NM_001167870,NM_001167871,NM_001167867,NR_030765,NM_001130514	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,-,+	ATP5SL,ATP5SL,B3GNT8,ATP5SL,ATP5SL,ATP5SL,ATP5SL,ATP5SL,C19orf69	4909,4547,-6289,4909,4909,4909,4547,4909,8071
chr9:35594681-35596197	chr9	+	35594736	35595953	True	NM_001782,NM_006285	chr9,chr9	-,+	CD72,TESK1	22528,9327
chrX:70324146-70324633	chrX	+	70324220	70324564	True	NM_005938,NM_001170931,NR_033212,NM_000206,NM_001025265	chrX,chrX,chrX,chrX,chrX	+,+,-,-,-	FOXO4,FOXO4,CXorf65,IL2RG,CXorf65	-8272,-8272,2124,6967,2124
chr18:13141928-13142216	chr18	+	13142131	13142259	True	NM_002828,NM_181481	chr18,chr18	-,+	PTPN2,C18orf1	-257797,76526
chr9:15421707-15422254	chr9	+	15421818	15422204	True	NM_021144,NM_001039697	chr9,chr9	-,+	PSIP1,SNAPC3	88133,577
chr3:45637004-45638444	chr3	+	45637087	45638335	True	NM_014240,NR_033947	chr3,chr3	+,-	LIMD1,LOC644714	-815,92090
chr3:197281394-197281715	chr3	+	197281409	197281747	True	NM_203314,NM_004051,NM_001011537	chr3,chr3,chr3	-,-,+	BDH1,BDH1,FYTTD1	1161,1161,194676
chr4:25537523-25539034	chr4	+	25537711	25538833	True	NM_015187,NM_001177998	chr4,chr4	-,+	SEL1L3,SLC34A2	325835,118601
chr9:125793981-125794932	chr9	+	125794056	125794946	True	NR_030331,NM_005294	chr9,chr9	-,+	MIR600,GPR21	79034,1899
chr10:124639702-124641655	chr10	+	124639869	124641507	True	NM_001204364,NM_152644,NR_037911,NR_027282,NR_037915	chr10,chr10,chr10,chr10,chr10	-,-,-,+,-	FAM24B,FAM24B,FAM24B,LOC399815,FAM24B-CUZD1	-712,-712,-712,-774,-712
chrX:133590907-133591695	chrX	+	133591067	133591737	True	NM_000194,NR_030587	chrX,chrX	+,-	HPRT1,MIR450B	2437,82611
chr20:45137995-45139084	chr20	+	45138046	45139060	True	NM_018102,NM_030777,NM_199441	chr20,chr20,chr20	-,+,-	ZNF334,SLC2A10,ZNF334	3184,199218,3184
chr1:27154560-27155484	chr1	+	27154616	27155482	True	NM_018066,NM_032283	chr1,chr1	-,+	GPN2,ZDHHC18	61437,-1467
chr16:57279426-57279650	chr16	+	57279456	57279568	True	NM_015993,NM_012106	chr16,chr16	-,+	PLLP,ARL2BP	39066,-469
chr2:205406177-205407182	chr2	+	205406245	205407157	True	NM_057177,NM_203365,NM_152526,NM_205863	chr2,chr2,chr2,chr2	+,-,+,+	PARD3B,RAPH1,PARD3B,PARD3B	3358,-1006187,3358,3358
chr3:26684229-26685337	chr3	+	26684524	26685317	True	NM_052953,NM_199347	chr3,chr3	+,-	LRRC3B,NEK10	-20275,725650
chr3:123260916-123262216	chr3	+	123261425	123262228	True	NM_198402,NM_012430	chr3,chr3	-,+	PTPLB,SEC22A	41746,-340709
chr3:138739768-138740416	chr3	+	138739793	138740114	True	NM_001040061,NM_001013650	chr3,chr3	+,-	C3orf72,PRR23B	-73768,-25
chr2:29034744-29036508	chr2	+	29034790	29036387	True	NM_182756,NM_001142634,NM_001008779,NM_017910	chr2,chr2,chr2,chr2	+,+,+,-	SPDYA,SPDYA,SPDYA,TRMT61B	-1147,-1147,2475,56848
chr8:28745391-28746511	chr8	+	28745450	28746377	True	NM_001172562,NM_024567,NR_026826,NM_001135726,NM_018250,NM_001145159	chr8,chr8,chr8,chr8,chr8,chr8	-,+,-,+,-,-	INTS9,HMBOX1,INTS9,HMBOX1,INTS9,INTS9	1112,1847,1378,1533,1378,1378
chr9:103493247-103493576	chr9	+	103493246	103493471	True	NM_017746,NM_001018116	chr9,chr9	-,+	TEX10,MURC	-377987,-152969
chr13:23269761-23270837	chr13	+	23269791	23270511	True	NM_000231,NR_033774	chr13,chr13	+,-	SGCG,BASP1P1	484548,201859
chr6:26200547-26201241	chr6	+	26200546	26201033	True	NM_021065,NM_003545,NM_003530,NM_003522	chr6,chr6,chr6,chr6	-,+,-,+	HIST1H2AD,HIST1H4E,HIST1H3D,HIST1H2BF	-1075,3839,-1082,-818
chr16:848705-850026	chr16	+	848718	849750	True	NM_001013638,NM_016541	chr16,chr16	+,-	PRR25,GNG13	5692,1033
chr18:3011895-3012484	chr18	+	3011934	3012489	True	NM_014646,NM_032048	chr18,chr18	-,+	LPIN2,EMILIN2	-9,-164965
chr15:78380379-78380702	chr15	+	78380431	78380689	True	NM_001101404,NM_144572	chr15,chr15	+,-	SH2D7,TBC1D2B	4237,-10437
chr18:21849413-21851186	chr18	+	21849771	21851216	True	NR_031724,NM_018030	chr18,chr18	+,-	MIR320C2,OSBPL1A	50433,1030
chr22:43742756-43743834	chr22	+	43742778	43743810	True	NM_173050,NM_001044370	chr22,chr22	-,+	SCUBE1,MPPED1	-3423,64209
chr2:128418727-128419492	chr2	+	128418789	128419463	True	NM_005291,NM_017980	chr2,chr2	+,-	GPR17,LIMS2	-15401,2754
chr11:105891742-105892228	chr11	+	105891741	105892238	True	NM_032424,NM_015423	chr11,chr11	-,+	KIAA1826,AASDHPPT	775,56053
chr3:11296372-11297389	chr3	+	11296493	11297431	True	NM_000861,NM_001128221	chr3,chr3	+,-	HRH1,VGLL4	-2159,313017
chr1:229826187-229827921	chr1	+	229826569	229827528	True	NM_001025247,NM_014777	chr1,chr1	-,+	TAF5L,URB2	-64775,-64639
chr10:99534903-99535132	chr10	+	99534913	99535179	True	NM_003015,NM_001002261	chr10,chr10	-,+	SFRP5,ZFYVE27	-3157,-36730
chr12:94075468-94077224	chr12	+	94075946	94077268	True	NM_003348,NM_003805	chr12,chr12	-,+	UBE2N,CRADD	-239920,-4846
chr5:68526923-68528083	chr5	+	68527247	68528117	True	NM_176816,NM_001799	chr5,chr5	-,+	CCDC125,CDK7	88343,2504
chr15:75942480-75943301	chr15	+	75942556	75943312	True	NM_153271,NM_018285	chr15,chr15	+,-	SNX33,IMP3	-1259,-9892
chr11:3240876-3241422	chr11	+	3240945	3241267	True	NR_027138,NM_001164377	chr11,chr11	+,-	C11orf36,MRGPRG	-1434,-902
chrX:31279532-31280298	chrX	+	31279731	31280341	True	NM_203391,NM_004018,NM_004019,NM_004015,NM_004016,NM_004017	chrX,chrX,chrX,chrX,chrX,chrX	+,-,-,-,-,-	GK,DMD,DMD,DMD,DMD,DMD	-608309,4733,4733,4733,4733,4733
chr5:76934833-76935232	chr5	+	76934839	76935243	True	NM_032109,NM_003719	chr5,chr5	-,+	OTP,PDE8B	-317,-428184
chr13:114535793-114536158	chr13	+	114536047	114536113	True	NM_001143945,NM_001143946,NR_024609	chr13,chr13,chr13	-,-,+	GAS6,GAS6,FLJ44054	2954,651,50496
chr17:31207285-31208254	chr17	+	31207635	31208255	True	NM_001033504,NM_015194	chr17,chr17	+,-	TMEM98,MYO1D	46672,-3733
chr1:43143873-43144951	chr1	+	43143899	43144873	True	NM_001123395,NM_004559	chr1,chr1	-,+	CLDN19,YBX1	61111,3192
chr7:53072962-53074217	chr7	+	53073170	53074114	True	NM_182595,NR_004422	chr7,chr7	+,-	POM121L12,HPVC1	29234,1196062
chr13:40303315-40304627	chr13	+	40303501	40304122	True	NM_001145079,NR_036190	chr13,chr13	+,-	COG6,MIR4305	-73792,-65229
chr10:96534002-96535183	chr10	+	96534113	96534891	True	NM_000770,NM_000769	chr10,chr10	-,+	CYP2C8,CYP2C19	294413,-11712
chr11:62785351-62786698	chr11	+	62785371	62786736	True	NM_001184736,NR_037193,NM_001184732,NM_001184733,NM_004254	chr11,chr11,chr11,chr11,chr11	-,+,-,-,-	SLC22A8,SLC3A2,SLC22A8,SLC22A8,SLC22A8	-2054,-136265,-2054,-2054,-2054
chr20:23589165-23589432	chr20	+	23589165	23589475	True	NM_001008693,NR_001279	chr20,chr20	-,+	CST9,CSTT	-2555,-89433
chr7:70601864-70602216	chr7	+	70602072	70602134	True	NM_022479,NR_037477	chr7,chr7	+,-	WBSCR17,MIR3914-1	-4341,170674
chr12:117009579-117010328	chr12	+	117009584	117010118	True	NM_001085481,NM_024738	chr12,chr12	+,-	MAP1LC3B2,C12orf49	-12449,165776
chr1:201859683-201860855	chr1	+	201859753	201860571	True	NM_198149,NM_012134,NR_030775	chr1,chr1,chr1	+,-,+	SHISA4,LMOD1,SHISA4	-1999,55195,-2007
chr17:62050339-62050568	chr17	+	62050344	62050606	True	NM_001164257,NM_000334	chr17,chr17	+,-	C17orf72,SCN4A	25104,-66
chr16:61087521-61087777	chr16	+	61087520	61087772	True	NM_001796,NM_024860	chr16,chr16	-,+	CDH8,SETD6	983017,-2538188
chr11:69457520-69457995	chr11	+	69457783	69458013	True	NM_153451,NM_053056	chr11,chr11	-,+	ORAOV1,CCND1	32202,-1961
chr6:44231503-44232803	chr6	+	44231524	44232759	True	NM_001137560,NM_004556,NM_178148	chr6,chr6,chr6	+,-,-	TMEM151B,NFKBIE,SLC35B2	5720,816,-6241
chr12:102004918-102005576	chr12	+	102004934	102005322	True	NM_206821,NM_001177948	chr12,chr12	+,-	MYBPC1,SYCP3	-16238,127990
chr1:36539876-36541801	chr1	+	36540008	36541536	True	NM_005202,NM_014466	chr1,chr1	-,+	COL8A2,TEKT2	24364,8139
chr1:247619511-247620083	chr1	+	247619527	247619801	True	NM_001004492,NM_001004698	chr1,chr1	-,+	OR2B11,OR2W5	-4243,34568
chr22:24099611-24100311	chr22	+	24099756	24099818	True	NM_013378,NM_021916,NM_182520	chr22,chr22,chr22	-,-,+	VPREB3,ZNF70,C22orf15	-3126,-6477,5389
chrX:86855408-86856324	chrX	+	86855598	86856300	True	NM_019117,NM_001145414	chrX,chrX	+,-	KLHL4,CHM	-82934,-1553032
chr2:216181576-216182505	chr2	+	216181811	216182169	True	NM_002026,NM_004044	chr2,chr2	-,+	FN1,ATIC	118673,-5190
chr4:165899947-165900762	chr4	+	165900190	165900515	True	NM_153027,NM_001012414	chr4,chr4	+,-	C4orf39,TRIM61	-22148,-1372
chr1:16849002-16849361	chr1	+	16849133	16849403	True	NR_023386,NR_037446	chr1,chr1	-,+	CROCCP3,MIR3675	-29937,26005
chr16:48261239-48262310	chr16	+	48261436	48261982	True	NM_145186,NM_033151,NM_032583,NM_031490	chr16,chr16,chr16,chr16	-,-,-,+	ABCC11,ABCC11,ABCC11,LONP2	7166,4260,7166,16228
chr13:93879933-93880154	chr13	+	93879956	93880098	True	NM_001129889,NM_005708	chr13,chr13	-,+	DCT,GPC6	1251888,-929
chr6:45974269-45974503	chr6	+	45974277	45974407	True	NM_016929,NM_014936	chr6,chr6	-,+	CLIC5,ENPP4	9240,123293
chr3:14273489-14274201	chr3	+	14273630	14274220	True	NR_027299,NM_014463	chr3,chr3	-,+	XPC,LSM3	-53458,-53466
chr11:119597920-119598208	chr11	+	119597923	119598157	True	NM_203286,NM_203285,NR_034160,NM_002855	chr11,chr11,chr11,chr11	-,-,+,-	PVRL1,PVRL1,LOC100499227,PVRL1	1328,1328,-345486,1328
chr4:76860916-76861234	chr4	+	76860922	76861106	True	NM_014435,NM_001042402,NM_001130017	chr4,chr4,chr4	-,-,+	NAAA,NAAA,ART3	1110,1110,71230
chr2:241829880-241830973	chr2	+	241830005	241830729	True	NM_001085437,NM_024861,NM_000030	chr2,chr2,chr2	-,-,+	C2orf54,C2orf54,AGXT	4894,773,-21894
chrX:39643608-39644527	chrX	+	39643844	39644574	True	NM_005765,NM_001123385	chrX,chrX	+,-	ATP6AP2,BCOR	795641,312195
chr7:48883919-48885346	chr7	+	48883920	48885098	True	NR_003595,NM_152782	chr7,chr7	+,-	CDC14C,SUN3	79058,-815204
chr7:48883919-48885346	chr7	-	48966961	48967228	False	NR_003595,NM_152782	chr7,chr7	+,-	CDC14C,SUN3	-2855,-898245
chr14:75239845-75240545	chr14	+	75240003	75240212	True	NM_019589,NM_001039479	chr14,chr14	+,-	YLPM1,KIAA0317	-9992,-60196
chr21:38630726-38630971	chr21	+	38630778	38630968	True	NM_006052,NR_026719	chr21,chr21	-,+	DSCR3,DSCR9	8915,-49874
chr16:31471671-31472951	chr16	+	31471706	31472726	True	NM_001136509,NM_024742,NM_001105247	chr16,chr16,chr16	-,+,+	ZNF843,ARMC5,ARMC5	-17358,-1440,-1440
chr9:4490688-4491234	chr9	+	4490694	4491230	True	NM_001039395,NM_004170	chr9,chr9	-,+	C9orf68,SLC1A1	175494,-318
chr1:108223756-108224366	chr1	+	108223788	108224209	True	NM_001079874,NM_014917	chr1,chr1	-,+	VAV3,NTNG1	6978,-541094
chr11:3820097-3820488	chr11	+	3820220	3820486	True	NR_027018,NM_005387,NM_139131,NM_139132,NM_014489,NR_027016,NR_027017,NR_027014,NR_027015,NM_001145438,NM_016320	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,-,-,-,+,+,+,+,+,+,-	PGAP2,NUP98,NUP98,NUP98,PGAP2,PGAP2,PGAP2,PGAP2,PGAP2,PGAP2,NUP98	8753,-1198,-1198,-1198,9279,9279,-1081,-1317,-1139,-1222,-1198
chr1:47694954-47695406	chr1	+	47694994	47695449	True	NM_001010969,NM_003189	chr1,chr1	+,-	CYP4A22,TAL1	-91938,44
chr6:79911922-79913607	chr6	+	79912167	79913632	True	NM_001201362,NM_001010844	chr6,chr6	-,+	HMGN3,IRAK1BP1	30873,-335029
chr1:150898300-150898807	chr1	+	150898380	150898852	True	NM_001145415,NM_022075,NR_026977,NM_012432	chr1,chr1,chr1,chr1	+,-,+,+	SETDB1,LASS2,SETDB1,SETDB1	-38,48638,-28,-38
chr8:94753620-94754768	chr8	+	94753949	94754767	True	NM_203390,NR_027259	chr8,chr8	-,+	RBM12B,C8orf39	-725,-1661
chr12:27676703-27676980	chr12	+	27676708	27676974	True	NM_003622,NM_001146221,NM_001198916,NM_001198915,NM_177444	chr12,chr12,chr12,chr12,chr12	+,-,+,+,+	PPFIBP1,LOC100287284,PPFIBP1,PPFIBP1,PPFIBP1	70,247285,70,70,70
chr19:15532837-15533415	chr19	+	15532846	15533131	True	NM_014371,NR_031716	chr19,chr19	-,+	AKAP8L,MIR1470	-3013,27227
chr2:68022824-68023454	chr2	+	68022864	68023448	True	NM_001190263,NM_020143	chr2,chr2	-,+	C1D,PNO1	266761,361556
chr10:75755812-75756629	chr10	+	75756364	75756534	True	NM_003373,NM_001001791,NM_014000	chr10,chr10,chr10	+,-,+	VCL,C10orf55,VCL	1337,-73829,1337
chr5:159852652-159853904	chr5	+	159852810	159853746	True	NM_006425,NM_004219	chr5,chr5	-,+	SLU7,PTTG1	-6642,-4001
chr12:121340428-121340774	chr12	+	121340439	121340729	True	NM_139015,NM_000545	chr12,chr12	-,+	SPPL3,HNF1A	1472,75819
chrX:47520548-47521097	chrX	+	47520550	47521149	True	NM_004182,NR_027444,NM_153477,NR_028119	chrX,chrX,chrX,chrX	-,+,-,+	UXT,LOC100133957,UXT,LOC100133957	-1990,-2359,-2034,-2379
chr20:33543632-33544712	chr20	+	33543721	33544444	True	NM_000178,NM_020884	chr20,chr20	-,+	GSS,MYH7B	-120,-68
chr11:64763017-64763726	chr11	+	64763023	64763413	True	NM_001199745,NM_138456	chr11,chr11	+,-	ARL2,BATF2	18171,1154
chr17:44999971-45000373	chr17	+	44999970	45000362	True	NM_203400,NM_004287,NM_054022,NM_001012511	chr17,chr17,chr17,chr17	-,+,+,+	RPRML,GOSR2,GOSR2,GOSR2	56302,123,123,123
chr9:131938793-131939021	chr9	+	131938801	131938926	True	NM_203434,NM_001193397	chr9,chr9	-,+	IER5L,PPP2R4	1671,-64885
chr7:112758179-112758500	chr7	+	112758178	112758528	True	NR_024412,NM_182597,NR_015442	chr7,chr7,chr7	-,+,-	LOC401397,C7orf53,LOC401397	161,-637163,161
chr19:44099441-44099785	chr19	+	44099493	44099743	True	NM_001007561,NM_024327,NM_001145347	chr19,chr19,chr19	-,+,+	IRGQ,ZNF576,ZNF576	594,800,994
chr5:139407050-139408543	chr5	+	139407364	139408471	True	NM_001184935,NM_005859	chr5,chr5	-,+	NRG2,PURA	14463,85236
chr1:16172954-16173751	chr1	+	16173118	16173760	True	NR_024279,NM_015001	chr1,chr1	-,+	FLJ37453,SPEN	932,598
chr4:186067042-186068589	chr4	+	186067056	186068621	True	NM_020827,NM_001151	chr4,chr4	-,+	KIAA1430,SLC25A4	56616,-2697
chr19:45147827-45148801	chr19	+	45147826	45147896	True	NM_006505,NM_001135770,NM_001135769,NM_001135768,NR_027754	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	PVR,PVR,PVR,PVR,CEACAM22P	-779,-779,-779,-779,-87676
chr10:43247508-43247738	chr10	+	43247508	43247642	True	NM_014753,NM_006955	chr10,chr10	+,-	BMS1,ZNF33B	30311,-113516
chr1:202316246-202317677	chr1	+	202316602	202317600	True	NM_001167858,NM_002481,NM_014176,NM_001167857	chr1,chr1,chr1,chr1	+,+,-,+	PPP1R12B,PPP1R12B,UBE2T,PPP1R12B	229,229,-5508,229
chr9:125877147-125878024	chr9	+	125877285	125878051	True	NR_030331,NM_005294,NR_026677	chr9,chr9,chr9	-,+,-	MIR600,GPR21,NCRNA00287	-3363,-80490,-21
chr12:15133060-15134479	chr12	+	15133400	15134510	True	NM_001175,NM_006205	chr12,chr12	-,+	ARHGDIB,PDE6H	-18838,-7502
chrY:14531263-14531652	chrY	+	14531303	14531701	True	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	242596,1738
chr19:42803736-42804133	chr19	+	42803928	42804070	True	NM_199285,NM_001145939,NM_002573,NM_001145940	chr19,chr19,chr19,chr19	+,-,-,-	PRR19,PAFAH1B3,PAFAH1B3,PAFAH1B3	2213,2909,2776,2932
chr15:42485271-42486804	chr15	+	42485271	42486234	True	NM_198141,NR_030357	chr15,chr15	+,-	GANC,MIR627	80131,5680
chr7:123510537-123511336	chr7	+	123510893	123511216	True	NM_003941,NM_012269	chr7,chr7	-,+	WASL,HYAL4	-121777,-25723
chr1:1656048-1656388	chr1	+	1656070	1656294	True	NM_024011,NM_033489,NM_033488,NR_002946,NM_033487,NM_033486,NM_033492,NM_033493,NM_033529	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,-,-,-,-	CDK11A,CDK11B,CDK11B,MMP23A,CDK11B,CDK11B,CDK11B,CDK11B,CDK11A	-279,-295,-295,-24743,-295,-295,-295,-295,-279
chr1:1656048-1656388	chr1	+	1590781	1590966	False	NM_001110781,NR_002946	chr1,chr1	-,+	SLC35E2B,MMP23A	33328,-22673
chr5:103425301-103425530	chr5	+	103425308	103425534	True	NM_033211,NM_031438	chr5,chr5	+,-	C5orf30,NUDT12	-830917,-526818
chr19:42724963-42726329	chr19	+	42724968	42726228	True	NM_133444,NM_133328	chr19,chr19	+,-	ZNF526,DEDD2	-527,-3155
chr19:44261534-44262310	chr19	+	44261551	44262144	True	NM_019108,NM_019612	chr19,chr19	-,+	C19orf61,IRGC	-2409,-41388
chr19:42747499-42747761	chr19	+	42747539	42747805	True	NM_019884,NM_133444	chr19,chr19	-,+	GSK3A,ZNF526	-803,-23098
chr7:138935273-138935708	chr7	+	138935308	138935497	True	NM_173569,NM_024625	chr7,chr7	+,-	UBN2,ZC3HAV1	-19138,-140843
chr9:100288366-100288955	chr9	+	100288454	100288978	True	NM_139246,NM_003275	chr9,chr9	-,+	TSTD2,TMOD1	107034,-24597
chr5:41866723-41868679	chr5	+	41866807	41868431	True	NM_000436,NM_175921	chr5,chr5	-,+	OXCT1,C5orf51	2424,36038
chr6:17397848-17398370	chr6	+	17398095	17398409	True	NM_006366,NM_005124	chr6,chr6	+,-	CAP2,NUP153	-4417,308459
chr9:90110435-90110883	chr9	+	90110435	90110841	True	NR_036691,NM_004938	chr9,chr9	-,+	LOC494127,DAPK1	-410295,1914
chr3:97612283-97612737	chr3	+	97612331	97612773	True	NM_001042533,NM_177976	chr3,chr3	-,+	MINA,ARL6	78509,-128788
chr1:207096707-207098174	chr1	+	207096999	207097453	True	NM_005449,NM_001142473,NM_006850,NM_001193338	chr1,chr1,chr1,chr1	-,-,+,-	FAIM3,FAIM3,IL24,FAIM3	-1621,-1621,-26269,-1764
chr2:159826252-159827239	chr2	+	159826374	159827271	True	NM_152528,NM_001145909,NM_033394	chr2,chr2,chr2	-,+,+	WDSUB1,TANC1,TANC1	315842,-1279,-1279
chr4:85421045-85422885	chr4	+	85421461	85422829	True	NM_001263,NM_006168	chr4,chr4	+,-	CDS1,NKX6-1	81227,-2074
chr13:20133950-20134315	chr13	+	20134146	20134364	True	NM_199254,NM_017520	chr13,chr13	-,+	TPTE2,MPHOSPH8	-23243,73423
chr13:20133950-20134315	chr13	-	21835574	21835728	False	NM_145061,NM_024026	chr13,chr13	-,+	SKA3,MRP63	-84833,-85253
chr13:20133950-20134315	chr11	-	64083384	64083438	False	NM_181652,NM_012094,NM_016404,NM_181651	chr11,chr11,chr11,chr11	+,+,-,+	PRDX5,PRDX5,TRMT112,PRDX5	2130,2130,1645,2130
chr17:63793381-63795001	chr17	+	63793457	63794666	True	NM_002737,NM_001037325	chr17,chr17	+,-	PRKCA,CCDC46	504259,28046
chr19:58220716-58221154	chr19	+	58220740	58221044	True	NM_001085384,NM_138347	chr19,chr19	-,+	ZNF154,ZNF551	-161,-27434
chr7:23145829-23146234	chr7	+	23145930	23146152	True	NR_033329,NR_033328,NM_018846,NM_001172428,NM_032581,NM_001031710	chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,-,+	KLHL7,KLHL7,KLHL7,KLHL7,FAM126A,KLHL7	-628,-628,-64,-628,-92160,-628
chr22:20611880-20612436	chr22	+	20612112	20612176	True	NM_015672,NM_003426	chr22,chr22	-,+	RIMBP3,ZNF74	-150326,136303
chr20:389455-390359	chr20	+	389750	390408	True	NM_144628,NM_031229,NM_006462	chr20,chr20,chr20	-,+,+	TBC1D20,RBCK1,RBCK1	52829,-1092,-1092
chr16:48185166-48186332	chr16	+	48185301	48186311	True	NM_033226,NM_031490	chr16,chr16	-,+	ABCC12,LONP2	-4620,91899
chr11:14520725-14521061	chr11	+	14520729	14520963	True	NM_001144062,NM_016451,NM_001144061,NM_000922	chr11,chr11,chr11,chr11	-,-,-,+	COPB1,COPB1,COPB1,PDE3B	502,491,528,144305
chrX:107980022-107980234	chrX	+	107980110	107980250	True	NM_033380,NM_003604	chrX,chrX	+,-	COL4A5,IRS4	-297007,-503
chr3:57198269-57198594	chr3	+	57198397	57198599	True	NM_012096,NM_017563	chr3,chr3	+,-	APPL1,IL17RD	63165,854
chr16:331205-331774	chr16	+	331262	331806	True	NM_183337,NM_006849,NM_001176,NM_003834	chr16,chr16,chr16,chr16	-,+,+,-	RGS11,PDIA2,ARHGDIG,RGS11	-5348,1311,-707,-5348
chr2:242208809-242209358	chr2	+	242208857	242209391	True	NM_203346,NM_001008491	chr2,chr2	-,+	HDLBP,SEPT2	2960,45331
chr15:31617131-31617705	chr15	+	31617218	31617582	True	NM_015995,NM_002420	chr15,chr15	+,-	KLF13,TRPM1	1500,-223294
chr10:4928150-4928779	chr10	+	4928248	4928444	True	NM_001040177,NR_026743	chr10,chr10	+,-	AKR1E2,tAKR	-59905,30071
chr4:85851445-85851674	chr4	+	85851447	85851705	True	NM_014991,NR_015359	chr4,chr4	-,+	WDFY3,NCRNA00247	35889,36265
chr19:50708006-50708489	chr19	+	50708172	50708446	True	NM_024729,NM_001145809,NM_001077186,NM_152358	chr19,chr19,chr19,chr19	+,+,+,-	MYH14,MYH14,MYH14,IZUMO2	-1347,-1347,-1347,-41634
chr3:186389443-186390983	chr3	+	186389542	186390863	True	NM_000412,NM_001134415	chr3,chr3	+,-	HRG,TBCCD1	-5795,-101210
chr16:28516196-28517749	chr16	+	28516247	28517685	True	NM_018690,NM_145659	chr16,chr16	+,-	APOBR,IL27	-10305,520
chrX:153147650-153148072	chrX	+	153147681	153148119	True	NM_000425,NM_001143963,NM_024003,NR_027419	chrX,chrX,chrX,chrX	-,-,-,+	L1CAM,L1CAM,L1CAM,AVPR2	-6282,-6282,-6282,19865
chr8:30015187-30015530	chr8	+	30015220	30015538	True	NM_006571,NM_001100916	chr8,chr8	+,-	DCTN6,MBOAT4	-1458,-13020
chr4:84198615-84198976	chr4	+	84198624	84198797	True	NM_015697,NM_016067	chr4,chr4	-,+	COQ2,MRPS18C	7321,178320
chr10:90488567-90490137	chr10	+	90488662	90489625	True	NM_001080518,NM_144590	chr10,chr10	+,-	LIPK,ANKRD22	-4412,122157
chr1:155279983-155280481	chr1	+	155280017	155280525	True	NM_001135822,NM_002004,NM_000298,NM_001135821,NM_181871	chr1,chr1,chr1,chr1,chr1	+,+,-,+,-	FDPS,FDPS,PKLR,FDPS,PKLR	-1529,-1529,-8792,-1363,-9225
chr11:47571057-47571802	chr11	+	47571230	47571314	True	NM_001143984,NM_006560	chr11,chr11	+,-	PTPMT1,CELF1	15667,3540
chr11:1594506-1594965	chr11	+	1594632	1594980	True	NM_004420,NR_021489	chr11,chr11	-,+	DUSP8,LOC338651	-1482,-712
chr7:128282549-128283830	chr7	+	128283195	128283709	True	NR_024368,NM_001708	chr7,chr7	+,-	FLJ45340,OPN1SW	-1951,132185
chr1:44823248-44824830	chr1	+	44823420	44824511	True	NM_018150,NM_024066	chr1,chr1	+,-	RNF220,ERI3	46448,-2481
chr7:19157648-19157881	chr7	+	19157659	19157845	True	NM_001204148,NM_000474	chr7,chr7	+,-	HDAC9,TWIST1	-608810,-364
chr14:90863370-90863598	chr14	+	90863377	90863643	True	NM_006888,NM_001166106,NM_199043	chr14,chr14,chr14	+,+,-	CALM1,CALM1,C14orf102	-101,962,-65098
chr18:11371128-11373012	chr18	+	11371243	11372778	True	NM_022068,NM_182978	chr18,chr18	-,+	FAM38B,GNAL	-222482,316357
chr5:140027838-140028513	chr5	+	140027896	140028306	True	NM_001185012,NM_006083,NR_037428,NM_018502,NM_002488,NR_033697	chr5,chr5,chr5,chr5,chr5,chr5	-,+,+,+,-,-	NDUFA2,IK,MIR3655,TMCO6,NDUFA2,NDUFA2	-526,-575,-530,-8947,-526,-526
chr14:94684253-94685507	chr14	+	94684363	94685222	True	NM_058237,NM_016186	chr14,chr14	+,-	PPP4R4,SERPINA10	-43772,74200
chr13:24461813-24463049	chr13	+	24462094	24463015	True	NM_001135816,NM_005932,NM_001014442,NM_001007537	chr13,chr13,chr13,chr13	+,-,+,-	PCOTH,MIPEP,PCOTH,C1QTNF9B	576,622,12,8160
chr22:50310388-50311173	chr22	+	50310659	50311050	True	NM_024324,NM_024105,NM_001135101	chr22,chr22,chr22	+,-,+	CRELD2,ALG12,CRELD2	1232,1107,1232
chr13:52769904-52770156	chr13	+	52769943	52770027	True	NR_002816,NM_021645	chr13,chr13	-,+	THSD1P1,UTP14C	-1341,-171167
chr2:27579335-27579621	chr2	+	27579427	27579669	True	NM_001035521,NM_001521,NM_014748	chr2,chr2,chr2	-,-,+	GTF3C2,GTF3C2,SNX17	249,249,13719
chrX:3632575-3632839	chrX	+	3632575	3632869	True	NM_005044,NM_004042	chrX,chrX	-,+	PRKX,ARSF	-900,-647787
chr2:218927356-218929277	chr2	+	218927937	218928912	True	NM_198483,NR_002712	chr2,chr2	+,-	RUFY4,CXCR2P1	4825,-1924
chr11:65337217-65337462	chr11	+	65337239	65337331	True	NM_001099409,NM_006396,NM_152832,NM_021070,NM_001098785,NM_001098784	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,-,+,+	EHBP1L1,SSSCA1,FAM89B,LTBP3,FAM89B,FAM89B	6177,611,2488,-11540,2488,2488
chr18:29022667-29023680	chr18	+	29022684	29023460	True	NM_004775,NM_001944	chr18,chr18	-,+	B4GALT6,DSG3	241282,4271
chr7:151576048-151577025	chr7	+	151576340	151576916	True	NM_145292,NM_016203	chr7,chr7	+,-	GALNTL5,PRKAG2	76547,-2024
chr1:218479962-218481572	chr1	+	218479961	218481337	True	NM_016052,NM_018040	chr1,chr1	+,-	RRP15,GPATCH2	-21384,-675552
chr6:16126203-16127886	chr6	+	16126907	16127568	True	NM_013262,NR_036448	chr6,chr6	+,-	MYLIP,DTNBP1	1748,-463618
chr17:56430147-56430540	chr17	+	56430157	56430460	True	NR_027647,NM_003168	chr17,chr17	+,-	LPO,SUPT4H1	-114426,-594
chr19:52933562-52934397	chr19	+	52933573	52933758	True	NM_001143939,NM_001143938,NM_001105549	chr19,chr19,chr19	+,+,-	ZNF534,ZNF534,ZNF83	908,908,207937
chr6:39292798-39293720	chr6	+	39292819	39293757	True	NM_001135105,NM_032115,NM_001135107,NM_001135106,NM_002062	chr6,chr6,chr6,chr6,chr6	-,-,-,-,+	KCNK16,KCNK16,KCNK16,KCNK16,GLP1R	-2489,-2489,-2489,-2489,-276319
chr3:187577090-187577520	chr3	+	187577113	187577308	True	NR_034062,NM_001706	chr3,chr3	+,-	LOC100131635,BCL6	-157011,-113600
chr5:138893948-138894863	chr5	+	138894040	138894217	True	NM_198282,NM_003339	chr5,chr5	-,+	TMEM173,UBE2D2	-31697,46533
chr13:52174646-52175640	chr13	+	52174766	52175501	True	NM_052950,NM_001039938	chr13,chr13	+,-	WDFY2,INTS6	-16333,-147491
chrX:80064104-80064383	chrX	+	80064166	80064432	True	NM_152630,NM_153252	chrX,chrX	+,-	FAM46D,BRWD3	-388271,851
chr11:93275576-93275836	chr11	+	93275576	93275710	True	NM_033395,NM_020179	chr11,chr11	+,-	KIAA1731,C11orf75	119105,886
chr7:47990450-47991514	chr7	+	47990640	47991449	True	NM_138295,NM_001100159	chr7,chr7	-,+	PKD1L1,C7orf57	-2569,83667
chr22:23413363-23413664	chr22	+	23413466	23413604	True	NM_002073,NM_014433	chr22,chr22	+,-	GNAZ,RTDR1	-848,70687
chr5:93960820-93961381	chr5	+	93960931	93961431	True	NM_001145678,NM_173665,NM_032290	chr5,chr5,chr5	-,-,+	KIAA0825,KIAA0825,ANKRD32	-6622,-6622,-6596
chrX:102962244-102962736	chrX	+	102962256	102962754	True	NM_001142432,NM_182541	chrX,chrX	-,+	MORF4L2,TMEM31	-19170,3082
chr6:43195750-43196418	chr6	+	43195854	43196227	True	NM_006443,NM_199184,NM_032538	chr6,chr6,chr6	-,-,+	C6orf108,C6orf108,TTBK1	1041,1041,14994
chr12:6642646-6642872	chr12	+	6642741	6642921	True	NM_001039670,NM_002046	chr12,chr12	-,+	IFFO1,GAPDH	22378,735
chr5:133706271-133706551	chr5	+	133706270	133706492	True	NM_016508,NM_003337,NM_001113575	chr5,chr5,chr5	-,+,-	CDKL3,UBE2B,CDKL3	-3505,377,-3505
chr2:69610268-69610916	chr2	+	69610405	69610619	True	NM_002056,NR_036073	chr2,chr2	-,+	GFPT1,MIR3126	3813,-279642
chr19:34511292-34512171	chr19	+	34511376	34511979	True	NM_001114093,NM_001166057	chr19,chr19	+,-	LSM14A,PEPD	151372,-498577
chr1:30318-31026	chr12	-	72613	73093	False	NR_028269,NR_026823	chr12,chr12	+,-	LOC100288778,FAM138D	14890,76369
chr1:30318-31026	chr19	+	72201	72681	False	NR_026820,NR_026818,NM_001005240,NR_033266	chr19,chr19,chr19,chr19	-,-,+,-	FAM138F,FAM138A,OR4F17,WASH5P	5059,5059,37997,-1235
chr1:30318-31026	chr15	-	102500518	102500570	False	NR_026819,NR_034090	chr15,chr15	+,-	FAM138E,DDX11L9	-5481,18776
chr1:30318-31026	chr9	+	30372	30424	False	NM_182905,NM_203447,NR_026822	chr9,chr9,chr9	-,+,-	WASH1,DOCK8,FAM138C	-633,184440,5490
chr1:30318-31026	chr1	+	30594	31072	True	NM_001005221,NR_028325	chr1,chr1	-,+	OR4F29,LOC100132062	591012,292819
chr10:35105136-35107106	chr10	+	35105186	35106508	True	NM_019619,NM_001184789,NM_001184788,NM_001184790,NM_001184791,NM_001184792,NM_001184793,NM_001184787,NM_001184786,NM_001184785,NM_001184794,NM_001881	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,-,-,-,-,-,-,-,+	PARD3,PARD3,PARD3,PARD3,PARD3,PARD3,PARD3,PARD3,PARD3,PARD3,PARD3,CREM	-933,-933,-933,-933,-933,-933,-933,-933,-933,-933,-933,309292
chr17:78161493-78161704	chr17	+	78161537	78161705	True	NM_000199,NM_052819,NM_024110	chr17,chr17,chr17	-,+,+	SGSH,CARD14,CARD14	32544,11,-9307
chr19:342923-343159	chr19	+	342930	343186	True	NM_017550,NM_130760	chr19,chr19	-,+	MIER2,MADCAM1	1655,153303
chr12:110884705-110886581	chr12	+	110884808	110886531	True	NM_005719,NM_013300	chr12,chr12	-,+	ARPC3,C12orf24	1684,19700
chr19:47106063-47106680	chr19	+	47106120	47106640	True	NM_001205281,NM_005184	chr19,chr19	-,+	LOC100506012,CALM3	-1663,-1659
chr19:51856040-51856709	chr19	+	51856181	51856547	True	NM_001014763,NM_001101372	chr19,chr19	-,+	ETFB,IGLON5	1599,-41130
chr5:108746554-108747504	chr5	+	108746641	108747561	True	NM_014819,NM_002372	chr5,chr5	-,+	PJA2,MAN2A1	-966,277594
chr20:33566147-33566661	chr20	+	33566309	33566703	True	NR_030223,NM_000178	chr20,chr20	+,-	MIR499,GSS	11475,-22708
chr5:138676620-138676865	chr5	+	138676720	138676910	True	NM_016480,NM_001033112,NM_005847	chr5,chr5,chr5	+,+,-	PAIP2,PAIP2,SLC23A1	608,1223,42179
chr11:62690041-62690613	chr11	+	62690176	62690655	True	NR_037193,NM_000738	chr11,chr11	+,-	SLC3A2,CHRM1	-41056,-1164
chr1:48257428-48258919	chr1	+	48257449	48258859	True	NM_001194986,NM_004474	chr1,chr1	-,+	LOC388630,FOXD2	203753,-355811
chr15:69856466-69857170	chr15	+	69856901	69857161	True	NR_026979,NR_030714	chr15,chr15	+,-	LOC145837,MIR629	-2901,514712
chr19:52846675-52848328	chr19	+	52846835	52848047	True	NM_001161427,NM_001161426,NM_001161425,NM_001102657,NM_173530	chr19,chr19,chr19,chr19,chr19	+,+,+,-,+	ZNF610,ZNF610,ZNF610,ZNF836,ZNF610	-7396,-7396,-7396,-171939,634
chr1:204131962-204132799	chr1	+	204132016	204132678	True	NM_005686,NM_000537	chr1,chr1	+,-	SOX13,REN	-89821,2837
chr9:130640120-130640581	chr9	+	130640159	130640569	True	NM_000476,NM_001018078	chr9,chr9	-,+	AK1,FPGS	-137,-74702
chr3:195811184-195812202	chr3	+	195811311	195812055	True	NM_003234,NR_034088,NM_001128148	chr3,chr3,chr3	-,+,-	TFRC,LOC401109,TFRC	-2350,57451,-2279
chr9:88352780-88354477	chr9	+	88352789	88354268	True	NR_029410,NM_015239	chr9,chr9	+,-	LOC389765,AGTPBP1	66648,2726
chr5:133301834-133303720	chr5	+	133302135	133303535	True	NM_003202,NM_020199	chr5,chr5	+,-	TCF7,C5orf15	146866,921
chr1:211615230-211615600	chr1	+	211615402	211615634	True	NM_001164688,NR_026761	chr1,chr1	-,+	RD3,C1orf97	50675,-59370
chr22:25388272-25388704	chr22	+	25388289	25388507	True	NM_001001663,NM_001145206	chr22,chr22	-,+	TMEM211,KIAA1671	-52975,35433
chr11:31833057-31833307	chr11	+	31833101	31833271	True	NM_001127612,NM_000280,NM_001604,NR_033971	chr11,chr11,chr11,chr11	-,-,-,+	PAX6,PAX6,PAX6,DKFZp686K1684	6288,-222,-222,4842
chr22:35864007-35864783	chr22	+	35864203	35864577	True	NM_005368,NM_006739	chr22,chr22	-,+	MB,MCM5	148863,-68138
chr12:4227875-4228173	chr12	+	4227974	4228170	True	NM_001759,NM_020367	chr12,chr12	+,-	CCND2,PARP11	154731,-245366
chr2:204568474-204569953	chr2	+	204568749	204569966	True	NM_006139,NM_203365	chr2,chr2	+,-	CD28,RAPH1	1231,-168691
chr5:145831184-145832311	chr5	+	145831255	145832105	True	NM_006706,NM_001040006,NM_194251	chr5,chr5,chr5	+,+,-	TCERG1,TCERG1,GPR151	-4439,-4439,63628
chr3:195158238-195159508	chr3	+	195159139	195159330	True	NM_012287,NR_003265	chr3,chr3	-,+	ACAP2,SDHAP2	4538,225579
chr3:128295762-128296608	chr3	+	128296002	128296504	True	NM_007354,NR_026954	chr3,chr3	-,+	C3orf27,LOC90246	-1073,-69375
chr15:57531576-57532799	chr15	+	57531730	57532806	True	NM_207040,NR_015419	chr15,chr15	+,-	TCF12,LOC145783	-20128,-321033
chr16:3030864-3031517	chr16	+	3030863	3031047	True	NR_033861,NM_004203,NM_182687	chr16,chr16,chr16	+,-,-	LOC283875,PKMYT1,PKMYT1	8007,-323,-323
chr4:84255603-84256142	chr4	+	84255714	84256014	True	NM_001166498,NM_006665,NM_001098540,NM_001199830,NM_016067	chr4,chr4,chr4,chr4,chr4	-,-,-,-,+	HPSE,HPSE,HPSE,HPSE,MRPS18C	342,342,70,2,121103
chr4:159645297-159645862	chr4	+	159645567	159645897	True	NM_005038,NM_020840	chr4,chr4	-,+	PPID,FNIP2	-1015,44284
chr1:233084694-233085221	chr1	+	233084857	233085267	True	NM_032324,NM_014801	chr1,chr1	+,-	NTPCR,PCNXL2	1102,346242
chr4:186294618-186296532	chr4	+	186294647	186296160	True	NM_181726,NM_018409	chr4,chr4	+,-	ANKRD37,LRP2BP	21679,4056
chr7:142585916-142586122	chr7	+	142585946	142586034	True	NM_004445,NM_018646	chr7,chr7	+,-	EPHB6,TRPV6	-33213,-2469
chr11:76430650-76431009	chr11	+	76430678	76431024	True	NM_015516,NR_024042	chr11,chr11	+,-	TSKU,GUCY2E	63260,1859
chr1:145063365-145063959	chr1	+	145063550	145063723	True	NM_004892,NM_022359	chr1,chr1	+,-	SEC22B,PDE4DIP	32683,12513
chr1:186808465-186809760	chr1	+	186808476	186809797	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-158917,-10498
chr1:210116080-210116772	chr1	+	210116095	210116806	True	NM_006147,NM_153262,NM_001146264,NR_027459,NM_001146262,NR_027458,NM_001146261	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,+,+,+,+	IRF6,SYT14,SYT14,SYT14,SYT14,SYT14,SYT14	-136616,-4614,-4614,-4614,-4614,-4614,-4614
chr15:55614226-55616176	chr15	+	55614541	55616035	True	NM_004855,NM_183235	chr15,chr15	+,-	PIGB,RAB27A	-3473,-32540
chr17:73283900-73285079	chr17	+	73284395	73285102	True	NM_021734,NM_001126122,NM_001126121,NR_036520	chr17,chr17,chr17,chr17	-,-,-,+	SLC25A19,SLC25A19,SLC25A19,LOC100287042	478,478,478,-17066
chr2:170434676-170435022	chr2	+	170434800	170434896	True	NM_004792,NM_024622	chr2,chr2	+,-	PPIG,FASTKD1	5953,-4376
chr9:98911485-98911743	chr9	+	98911511	98911757	True	NR_033838,NR_024129	chr9,chr9	+,-	LOC158435,NCRNA00092	-83449,-127474
chr12:51630079-51631422	chr12	+	51630208	51631014	True	NM_014764,NM_001136269,NM_001136268,NR_026893,NM_001136264,NM_001136267,NM_001136266	chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,+,-,+,+,+	DAZAP2,DAZAP2,DAZAP2,POU6F1,DAZAP2,DAZAP2,DAZAP2	1493,1493,1493,-18731,1493,1493,1493
chr3:69171733-69173511	chr3	+	69171798	69172964	True	NM_006407,NM_198271	chr3,chr3	+,-	ARL6IP5,LMOD3	-37760,-52
chr22:30641745-30641978	chr22	+	30641754	30641975	True	NM_001017437,NM_002309	chr22,chr22	+,-	CCDC157,LIF	110651,871
chr17:41437759-41438307	chr17	+	41437858	41438291	True	NR_027412,NM_001661	chr17,chr17	-,+	LOC100130581,ARL4D	28026,38061
chr1:146495900-146496457	chr1	+	146496004	146496414	True	NR_024442,NR_002305	chr1,chr1	-,+	LOC728989,PDIA3P	18235,153015
chr7:8009464-8009731	chr7	+	8009502	8009732	True	NM_138426,NM_002947	chr7,chr7	+,-	GLCCI1,RPA3	-1130,-251264
chr19:35087288-35088750	chr19	+	35087293	35088651	True	NM_001025591,NM_001012320	chr19,chr19	-,+	SCGBL,ZNF302	-1803,79915
chr4:75229500-75229832	chr4	+	75229502	75229882	True	NM_001432,NM_002089	chr4,chr4	+,-	EREG,CXCL2	977,-264505
chr6:157748723-157749555	chr6	+	157748953	157749572	True	NM_018452,NM_024630	chr6,chr6	-,+	C6orf35,ZDHHC14	-3700,52984
chr5:59818773-59819228	chr5	+	59818775	59819269	True	NR_028509,NM_001165899	chr5,chr5	+,-	PART1,PDE4D	-35067,-34850
chr6:22288485-22290482	chr6	+	22288842	22290478	True	NM_000948,NM_138574	chr6,chr6	-,+	PRL,HDGFL1	7302,279199
chr11:61660016-61660306	chr11	+	61660115	61660211	True	NM_001139443,NM_021727	chr11,chr11	+,-	BEST1,FADS3	57144,-1109
chr8:143697792-143698131	chr8	+	143697814	143698096	True	NM_015193,NR_033343	chr8,chr8	-,+	ARC,PSCA	-1981,53629
chr6:14770967-14771568	chr6	+	14770973	14771460	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	475066,891886
chr9:35102694-35103112	chr9	+	35102878	35103156	True	NM_032634,NM_006377,NM_152850,NM_013442,NM_001201484	chr9,chr9,chr9,chr9,chr9	-,+,-,-,-	PIGO,UNC13B,PIGO,STOML2,PIGO	-6332,58832,-6280,48,-6332
chr14:61447898-61448138	chr14	+	61448053	61448123	True	NM_001172702,NM_020810,NM_153811,NR_033344	chr14,chr14,chr14,chr14	+,-,+,+	SLC38A6,TRMT5,SLC38A6,SLC38A6	-272,-271,-272,-139
chr12:80323265-80324474	chr12	+	80323622	80324227	True	NM_001143885,NM_002480,NM_173591	chr12,chr12,chr12	-,-,+	PPP1R12A,PPP1R12A,OTOGL	5073,4816,279005
chr17:60353238-60353548	chr17	+	60353498	60353562	True	NR_027486,NM_001144933	chr17,chr17	-,+	TBC1D3P2,EFCAB3	-482,94016
chr11:47572079-47573280	chr11	+	47572078	47573160	True	NM_001143984,NM_006560	chr11,chr11	+,-	PTPMT1,CELF1	13821,1689
chr4:54448576-54450209	chr4	+	54448599	54450211	True	NM_001126328,NM_030917	chr4,chr4	-,+	LNX1,FIP1L1	7563,-204832
chr1:39547573-39547786	chr1	+	39547599	39547804	True	NM_017821,NM_012090	chr1,chr1	-,+	RHBDL2,MACF1	-140143,-561
chr22:29659460-29659831	chr22	+	29659557	29659741	True	NM_012265,NM_005243,NM_013986,NM_001163285,NM_001163287,NM_001163286	chr22,chr22,chr22,chr22,chr22,chr22	-,+,+,+,+,+	RHBDD3,EWSR1,EWSR1,EWSR1,EWSR1,EWSR1	4223,4256,4256,4256,4256,4256
chr13:48575345-48576238	chr13	+	48575367	48575923	True	NM_003850,NM_018283	chr13,chr13	-,+	SUCLA2,NUDT15	95,35779
chrX:72167807-72168957	chrX	+	72168015	72168794	True	NR_034116,NR_026594,NR_026595	chrX,chrX,chrX	+,-,-	LOC100129407,NCRNA00246B,NCRNA00246	-10070,-4426,-4426
chrX:72167807-72168957	chrX	-	71991696	71992475	False	NR_034116,NM_001080851	chrX,chrX	-,+	LOC100129407,DMRTC1B	10066,72400
chr1:1630366-1630607	chr1	+	1630376	1630596	True	NM_001110781,NR_002946	chr1,chr1	-,+	SLC35E2B,MMP23A	-6133,781
chr1:1630366-1630607	chr1	+	1682986	1683156	False	NM_182838,NM_001198995,NM_001199787,NR_002946	chr1,chr1,chr1,chr1	-,-,-,+	SLC35E2,NADK,SLC35E2,MMP23A	-5548,6975,-5548,-51659
chr1:52337634-52338099	chr1	+	52337947	52338101	True	NM_001101662,NM_148907,NM_002525	chr1,chr1,chr1	-,+,-	NRD1,OSBPL9,NRD1	6558,-142521,6558
chrX:48382868-48384194	chrX	+	48383521	48384201	True	NM_006579,NM_033518	chrX,chrX	+,-	EBP,SLC38A5	-3415,-54877
chr4:99581959-99582984	chr4	+	99582260	99583024	True	NM_005723,NM_015143	chr4,chr4	-,+	TSPAN5,METAP1	-2448,333763
chr22:24128159-24128773	chr22	+	24128408	24128738	True	NM_213720,NM_003073,NM_001007468	chr22,chr22,chr22	-,+,+	CHCHD10,SMARCB1,SMARCB1	-18267,411,411
chr8:354518-355498	chr2	+	243028764	243028835	True	NM_005018	chr2	-	PDCD1	-227706
chr3:42914763-42916063	chr3	+	42914929	42916099	True	NM_207404,NM_004391	chr3,chr3	+,-	ZNF662,CYP8B1	31302,1584
chr5:150405865-150406386	chr5	+	150405869	150406299	True	NM_002084,NM_006058	chr5,chr5	+,-	GPX3,TNIP1	-5921,54748
chr1:214159738-214160134	chr1	+	214159737	214160159	True	NR_037850,NM_002763	chr1,chr1	-,+	LOC100505832,PROX1	-20129,1700
chr17:40575604-40576583	chr17	+	40575641	40576266	True	NM_001130020,NM_012232	chr17,chr17	+,-	ATP6V0A1,PTRF	34595,-303
chr6:14940430-14941190	chr6	+	14940766	14941103	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	305423,722248
chr15:45703394-45704218	chr15	+	45703738	45703798	True	NM_001482,NM_024063,NR_027635	chr15,chr15,chr15	-,+,+	GATM,SPATA5L1,SPATA5L1	-32758,-9270,-9270
chr20:44882252-44883752	chr20	+	44882258	44883569	True	NM_152854,NM_021248	chr20,chr20	+,-	CD40,CDH22	-135403,-1924
chr16:74806932-74808323	chr16	+	74807065	74808001	True	NM_024306,NM_032268	chr16,chr16	-,+	FA2H,ZNRF1	778,224913
chr11:6232289-6232697	chr11	+	6232358	6232746	True	NM_173525,NM_001098794	chr11,chr11	+,-	C11orf42,FAM160A2	-5611,23245
chr7:100029567-100030672	chr7	+	100029619	100030549	True	NM_001194992,NM_001194991,NM_001194990,NM_019606,NM_017984,NM_145030	chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,-,-	MEPCE,MEPCE,MEPCE,MEPCE,ZCWPW1,C7orf47	-3257,-3257,-3257,-2416,-3317,3595
chr2:65431198-65432405	chr2	+	65431380	65432424	True	NM_001005386,NM_015543	chr2,chr2	+,-	ACTR2,RAB1A	22404,-73945
chr12:44169233-44169843	chr12	+	44169232	44169663	True	NM_016123,NM_031292	chr12,chr12	+,-	IRAK4,PUS7L	-16546,-16636
chr1:92724296-92725382	chr1	+	92724590	92725220	True	NM_053274,NM_024813	chr1,chr1	-,+	GLMN,RPAP2	39402,39301
chr11:20406869-20407690	chr11	+	20407269	20407652	True	NM_001029865,NM_005788,NM_001145166,NM_001145167	chr11,chr11,chr11,chr11	-,+,+,+	DBX1,PRMT3,PRMT3,PRMT3	-225399,1423,1423,1423
chr8:101728551-101729329	chr8	+	101728705	101729200	True	NR_033962,NM_002568	chr8,chr8	+,-	FLJ42969,PABPC1	335081,5175
chr9:139943236-139943474	chr9	+	139943253	139943455	True	NM_207511,NM_001246,NM_203468,NM_015392	chr9,chr9,chr9,chr9	+,-,-,-	C9orf139,ENTPD2,ENTPD2,NPDC1	-21388,5100,5100,-2577
chr1:214725373-214725706	chr1	+	214725372	214725726	True	NM_016343,NM_005401	chr1,chr1	+,-	CENPF,PTPN14	50805,-348
chr6:27117114-27117550	chr6	+	27117163	27117377	True	NM_080596,NM_080593,NR_036096	chr6,chr6,chr6	+,-,+	HIST1H2AH,HIST1H2BK,MIR3143	-2306,-2526,-1809
chr3:93824536-93826424	chr3	+	93824641	93825580	True	NM_001195643,NM_022072	chr3,chr3	-,+	DHFRL1,NSUN3	-42574,-42850
chr16:31266396-31266994	chr16	+	31266531	31267044	True	NM_001145808,NM_000632,NM_152901	chr16,chr16,chr16	+,+,-	ITGAM,ITGAM,PYDC1	4243,4243,-38136
chr2:136591309-136592077	chr2	+	136591391	136591550	True	NM_002299,NM_014607	chr2,chr2	-,+	LCT,UBXN4	3259,-92259
chr4:151937996-151938517	chr4	+	151938271	151938345	True	NM_006726,NM_001006,NM_001199282	chr4,chr4,chr4	-,+,-	LRBA,RPS3A,LRBA	-1622,82408,-1835
chr9:17577490-17578389	chr9	+	17577575	17578434	True	NM_003026,NM_017637	chr9,chr9	+,-	SH3GL2,BNC2	518,-706789
chr11:120916480-120917306	chr11	+	120916540	120917361	True	NM_012101,NM_152715	chr11,chr11	-,+	TRIM29,TBCEL	-907677,-21784
chr1:220701255-220701479	chr1	+	220701255	220701387	True	NM_012414,NM_018650	chr1,chr1	-,+	RAB3GAP2,MARK1	-255412,180
chr6:144163378-144163808	chr6	+	144163631	144163853	True	NM_001080952,NM_032860	chr6,chr6	-,+	PLAGL1,LTV1	165738,654
chr7:5602247-5602741	chr7	+	5602277	5602409	True	NM_001101,NM_003088	chr7,chr7	-,+	ACTB,FSCN1	-32045,30044
chr16:75604156-75604458	chr16	+	75604181	75604505	True	NM_001077419,NM_007285	chr16,chr16	-,+	TMEM231,GABARAPL2	-14011,-3995
chr11:47792534-47792805	chr11	+	47792658	47792831	True	NM_001164379,NM_015308	chr11,chr11	+,-	FAM180B,FNBP4	-184485,-3665
chr10:61126098-61127457	chr10	+	61126098	61127260	True	NM_001143773,NM_001143774,NM_198215,NM_001001971,NM_001166698	chr10,chr10,chr10,chr10,chr10	-,+,-,-,-	FAM13C,PHYHIPL,FAM13C,FAM13C,FAM13C	-3437,-188930,-3746,-3746,-3746
chr6:31324960-31325193	chr6	+	31324984	31325102	True	NM_005514,NR_036523	chr6,chr6	-,+	HLA-B,MICA	1,42458
chr6:35693871-35694575	chr6	+	35693875	35694530	True	NM_001145775,NM_145028	chr6,chr6	-,+	FKBP5,C6orf81	1883,10328
chr17:75085481-75086130	chr17	+	75085507	75085823	True	NM_001204408,NR_036200,NR_027058,NM_001204410,NR_003013	chr17,chr17,chr17,chr17,chr17	+,-,+,+,+	SEC14L1,MIR4316,C17orf86,SEC14L1,SCARNA16	-846,307363,-846,-336,-182
chr13:28493425-28494055	chr13	+	28493545	28494029	True	NM_000209,NM_001265	chr13,chr13	+,-	PDX1,CDX2	138,49338
chr2:228028287-228028500	chr2	+	228028360	228028540	True	NM_000091,NM_000092	chr2,chr2	+,-	COL4A3,COL4A4	740,785
chr22:48974508-48975133	chr22	+	48974777	48975059	True	NR_033377,NM_015381	chr22,chr22	-,+	FLJ46257,FAM19A5	-947459,-2711
chrX:83402613-83403105	chrX	+	83402662	83403117	True	NM_021118,NM_014496	chrX,chrX	+,-	CYLC1,RPS6KA6	-286553,39876
chrX:151898253-151900012	chrX	+	151898384	151899970	True	NM_001166387,NM_001166386,NM_001102576,NM_005367,NM_153478	chrX,chrX,chrX,chrX,chrX	-,-,+,-,+	MAGEA12,MAGEA12,CSAG1,MAGEA12,CSAG1	3264,3181,3257,3264,3257
chr10:21434740-21436321	chr10	+	21434746	21436214	True	NM_001177483,NM_001010896,NM_001195627	chr10,chr10,chr10	-,-,+	C10orf113,C10orf113,MLLT10	172,172,386886
chr2:223536657-223537723	chr2	+	223536741	223537441	True	NM_058165,NM_005687	chr2,chr2	+,-	MOGAT1,FARSB	-335,-15914
chr8:21987452-21987950	chr8	+	21987469	21987833	True	NM_005144,NM_001172357,NM_018411	chr8,chr8,chr8	-,+,-	HR,SFTPC,HR	782,31350,782
chr5:153567273-153569223	chr5	+	153567380	153569055	True	NM_018691,NM_198321	chr5,chr5	-,+	FAM114A2,GALNT10	-148883,1239
chr17:6858544-6859143	chr17	+	6858543	6859161	True	NM_000697,NR_029712	chr17,chr17	+,-	ALOX12,MIR195	40222,61909
chr8:11987132-11988348	chr8	+	11987416	11988181	True	NM_201402,NR_003275,NR_027425	chr8,chr8,chr8	-,-,+	USP17L2,LOC392196,FAM66D	8151,-612,-14176
chr17:39781280-39781901	chr17	+	39781295	39781769	True	NM_005801,NM_000422	chr17,chr17	+,-	EIF1,KRT17	63357,-413
chr6:151560925-151561234	chr6	+	151560957	151561213	True	NM_005100,NM_020861	chr6,chr6	+,-	AKAP12,ZBTB2	0,151514
chr19:13859743-13860029	chr19	+	13859750	13859824	True	NR_036515,NM_030818	chr19,chr19	-,+	LOC284454,CCDC130	87329,-1048
chr18:13826431-13827556	chr18	+	13826600	13827387	True	NM_005913,NM_000529	chr18,chr18	+,-	MC5R,MC2R	-1109,88199
chr14:35408225-35408627	chr14	+	35408235	35408651	True	NR_002937,NM_182648	chr14,chr14	+,-	C14orf19,BAZ1A	476,-63382
chr1:212734326-212734865	chr1	+	212734354	212734876	True	NM_001030287,NM_018664	chr1,chr1	+,-	ATF3,BATF3	3820,138501
chr12:56694296-56695714	chr12	+	56694421	56695635	True	NM_004077,NM_001099337	chr12,chr12	-,+	CS,COQ10A	-246,-33405
chr12:83088315-83088937	chr12	+	83088339	83088983	True	NM_152588,NR_033192	chr12,chr12	+,-	TMTC2,CCDC59	-7458,-335755
chr1:15764568-15766201	chr1	+	15764802	15766235	True	NM_001229,NM_007272	chr1,chr1	-,+	CASP9,CTRC	84755,-67
chr1:200377571-200378520	chr1	+	200377677	200378473	True	NM_001105517,NM_012482	chr1,chr1	+,-	FAM58B,ZNF281	-195073,743
chr9:140127617-140127897	chr9	+	140127655	140127865	True	NM_001190228,NM_080877,NM_006088,NM_001177316,NM_001177317,NM_031297,NM_199001	chr9,chr9,chr9,chr9,chr9,chr9,chr9	+,+,+,+,+,-,+	LOC643596,SLC34A3,TUBB2C,SLC34A3,SLC34A3,RNF208,C9orf169	-5688,-2321,7845,-2497,-2497,-11880,-8062
chr2:10824262-10825119	chr2	+	10824556	10825050	True	NM_001039362,NM_024894	chr2,chr2	+,-	ATP6V1C2,NOL10	36724,5112
chr4:190597129-190597501	chr4	+	190597181	190597549	True	NR_036692,NM_020040	chr4,chr4	+,-	HSP90AA4P,TUBB4Q	-202943,308525
chr7:44077023-44078034	chr7	+	44077067	44077835	True	NR_024116,NM_001014436,NM_001122956,NR_015401,NM_014063,NR_024416	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,+,+	RASA4P,DBNL,DBNL,FLJ35390,DBNL,FLJ35390	2437,6403,6403,862,6403,1231
chr7:44077023-44078034	chr7	+	102132232	102132289	False	NM_006234,NM_152892	chr7,chr7	-,+	POLR2J,LRWD1	-12851,-26900
chr7:44077023-44078034	chr7	+	102231402	102231459	False	NM_001166339,NM_001097615	chr7,chr7	+,-	SPDYE2L,POLR2J3	-39781,-18334
chr16:88931275-88931898	chr16	+	88931300	88931844	True	NM_001080487,NM_000512,NM_016209	chr16,chr16,chr16	-,-,+	PABPN1L,GALNS,TRAPPC2L	1274,-7926,-7845
chr16:4662634-4663074	chr16	+	4662665	4663003	True	NM_001142289,NM_145253	chr16,chr16	+,-	MGRN1,FAM100A	11822,1974
chr1:149831881-149832689	chr1	+	149831993	149832730	True	NM_001040874,NM_001034077,NM_003548,NR_036461,NM_001005464,NM_003516,NM_021059	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,-,+,+,+	HIST2H2AA4,HIST2H4B,HIST2H4A,HIST2H2BC,HIST2H3A,HIST2H2AA3,HIST2H3C	-9416,45,45,-9653,-7863,-9416,-7863
chr1:149831881-149832689	chr1	-	149804215	149804952	False	NM_001040874,NM_001034077,NM_003548,NM_001005464,NM_003516,NM_021059	chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,-,-,-	HIST2H2AA4,HIST2H4B,HIST2H4A,HIST2H3A,HIST2H2AA3,HIST2H3C	9416,-45,-45,7863,9416,7863
chr9:125696650-125697177	chr9	+	125696649	125697225	True	NM_012197,NM_020924	chr9,chr9	+,-	RABGAP1,ZBTB26	6062,-2870
chr22:18255973-18256335	chr22	+	18255976	18256306	True	NM_001196,NR_036168,NM_197967,NM_197966,NM_015367	chr22,chr22,chr22,chr22,chr22	-,-,-,-,+	BID,MIR3198,BID,BID,BCL2L13	1002,-8951,1002,523,-134542
chr1:13180594-13181315	chr1	+	13180597	13181230	True	NM_001100631,NM_001136561	chr1,chr1	+,-	PRAMEF22,LOC440563	-145109,3147
chr13:110958359-110958688	chr13	+	110958365	110958693	True	NM_001845,NM_001846	chr13,chr13	-,+	COL4A1,COL4A2	853,937
chr6:159238498-159239088	chr6	+	159238502	159239001	True	NM_001111077,NM_003379,NM_001195032	chr6,chr6,chr6	-,-,+	EZR,EZR,C6orf99	1505,389,70617
chr1:151796400-151797692	chr1	+	151796419	151797691	True	NR_024237,NM_001001523,NM_005060	chr1,chr1,chr1	+,-,-	LOC100132111,RORC,RORC	13253,912,6707
chr17:10740594-10741327	chr17	+	10740606	10741348	True	NM_020233,NM_001101387	chr17,chr17	+,-	C17orf48,PIRT	-139730,120
chr12:48921200-48921438	chr12	+	48921206	48921480	True	NM_001005203,NM_002289	chr12,chr12	+,-	OR8S1,LALBA	-1842,42403
chr17:59941395-59942214	chr17	+	59941415	59941973	True	NM_032043,NM_018488	chr17,chr17	-,+	BRIP1,TBX4	-495,-407659
chr17:7137360-7137599	chr17	+	7137363	7137539	True	NM_001033859,NM_024297,NM_007278,NM_004422	chr17,chr17,chr17,chr17	+,-,-,-	ACADVL,PHF23,GABARAP,DVL2	-14261,5336,8264,374
chr1:48449053-48449879	chr1	+	48449167	48449811	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	12803,238545
chr1:17045828-17046211	chr1	+	17046025	17046243	True	NR_026567,NR_037446	chr1,chr1	-,+	ESPNP,MIR3675	459,-38326
chr1:17045828-17046211	chr1	-	6488862	6488912	False	NM_019089,NR_036218,NM_031475	chr1,chr1,chr1	-,-,+	HES2,MIR4252,ESPN	-8883,1094,-4065
chr2:241832655-241832955	chr2	+	241832828	241832934	True	NM_001085437,NM_024861,NM_000030	chr2,chr2,chr2	-,-,+	C2orf54,C2orf54,AGXT	2689,-1376,-24717
chr1:27692293-27692531	chr1	+	27692298	27692558	True	NM_032872,NM_003665,NM_004672,NM_173452	chr1,chr1,chr1,chr1	+,-,-,-	SYTL1,FCN3,MAP3K6,FCN3	-23866,8807,829,8807
chr2:152584302-152585018	chr2	+	152584348	152585046	True	NM_001164507,NM_001177665,NM_004543,NM_001164508	chr2,chr2,chr2,chr2	-,+,-,-	NEB,RIF1,NEB,NEB	6012,-317806,6012,6012
chr16:72097848-72098445	chr16	+	72097948	72098460	True	NM_020995,NM_001126102,NM_017853,NM_005143	chr16,chr16,chr16,chr16	+,+,-,+	HPR,HP,TXNL4B,HP	-874,-9491,29129,-9491
chr1:38509957-38510192	chr1	+	38509984	38510096	True	NM_016037,NM_002699	chr1,chr1	+,-	UTP11L,POU3F1	-31651,2404
chr1:89355471-89357026	chr1	+	89355907	89356974	True	NM_006256,NM_001514	chr1,chr1	+,-	PKN2,GTF2B	-206036,377
chr16:77224555-77224784	chr16	+	77224565	77224805	True	NM_001129979,NM_014940,NM_199355	chr16,chr16,chr16	+,+,-	SYCE1L,MON1B,ADAMTS18	8543,30,244256
chr6:58180472-58181380	chr6	+	58180493	58181287	True	NM_000947,NR_003660	chr6,chr6	+,-	PRIM2,GUSBP4	-998128,106487
chr6:58180472-58181380	chr6	-	26689697	26689753	False	NM_013375,NM_024639	chr6,chr6	+,-	ABT1,ZNF322A	-92574,-29734
chr18:72917124-72917445	chr18	+	72917276	72917482	True	NM_005786,NM_175907	chr18,chr18	+,-	TSHZ1,ZADH2	5248,3849
chr2:27497945-27498277	chr2	+	27497975	27498249	True	NM_003459,NM_173650,NM_187841,NM_032546	chr2,chr2,chr2,chr2	-,+,+,+	SLC30A3,DNAJC5G,TRIM54,TRIM54	-12015,39,7047,7047
chr5:177555218-177556091	chr5	+	177555381	177556110	True	NM_022762,NM_001034833	chr5,chr5	+,-	RMND5B,NHP2	1917,24901
chr11:129685624-129686024	chr11	+	129685715	129685801	True	NM_138788,NM_006165	chr11,chr11	+,-	TMEM45B,NFRKB	-25,77153
chr15:69593587-69594397	chr15	+	69593736	69594417	True	NM_017705,NM_006305	chr15,chr15	+,-	PAQR5,ANP32A	-2495,-480475
chr4:120243224-120244574	chr4	+	120243223	120244362	True	NM_000134,NM_019050	chr4,chr4	-,+	FABP2,USP53	43,-109492
chr4:183958393-183958875	chr4	+	183958402	183958820	True	NR_024008,NR_003612	chr4,chr4	-,+	C4orf38,FAM92A3	61582,-3
chr22:22656376-22657008	chr22	+	22656471	22657026	True	NM_080764,NR_027293	chr22,chr22	-,+	ZNF280B,LOC96610	206529,-4063
chr1:16849361-16849711	chr1	+	16849365	16849743	True	NR_023386,NR_037446	chr1,chr1	-,+	CROCCP3,MIR3675	-30169,25665
chr11:113345395-113345655	chr11	+	113345542	113345704	True	NM_016574,NM_178510,NM_000795	chr11,chr11,chr11	-,+,-	DRD2,ANKK1,DRD2	347,-87080,347
chr5:140772284-140772547	chr5	+	140772292	140772596	True	NM_018925,NM_018921,NM_032087,NM_003736,NM_032099,NM_032098,NM_032088,NM_032089,NM_005642,NM_014004,NM_018920	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,+,+,-,+,+	PCDHGB5,PCDHGA9,PCDHGA7,PCDHGB4,PCDHGB5,PCDHGB4,PCDHGA8,PCDHGA9,TAF7,PCDHGA8,PCDHGA7	5098,9923,-9883,-4898,5098,-4898,-867,9923,-71941,-867,-9883
chr12:99039567-99040911	chr12	+	99039587	99040750	True	NM_001160,NM_181869,NM_181868,NM_181861,NM_153687,NM_013229,NM_201613,NM_201612	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,+,+,-,+,-,-	APAF1,APAF1,APAF1,APAF1,IKBIP,APAF1,IKBIP,IKBIP	-560,-560,-560,-560,-998,-560,-998,-998
chr17:15848556-15848965	chr17	+	15848573	15848889	True	NM_000676,NM_001042697	chr17,chr17	+,-	ADORA2B,ZSWIM7	-393,54167
chr7:54827643-54828614	chr7	+	54827661	54828425	True	NM_182546,NM_001012456,NM_014302	chr7,chr7,chr7	+,-,-	VSTM2A,SEC61G,SEC61G	-217693,-722,-722
chr19:36239908-36240293	chr19	+	36240144	36240264	True	NM_144987,NM_001040425,NM_024660,NM_001039887,NM_144617,NM_172341,NM_019104	chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,+,-,+,+	U2AF1L4,U2AF1L4,IGFLR1,C19orf55,HSPB6,PSENEN,LIN37	-3808,-3808,-6793,8779,7720,-3701,-683
chr10:126106592-126106854	chr10	+	126106610	126106790	True	NM_000274,NM_001171814,NM_001167880	chr10,chr10,chr10	-,-,+	OAT,OAT,LHPP	811,811,43550
chr12:8847806-8849259	chr12	+	8847919	8849262	True	NM_003480,NM_020734	chr12,chr12	-,+	MFAP5,RIMKLB	-32486,1255
chr6:116999600-117000946	chr6	+	116999681	117000711	True	NM_145062,NM_002269	chr6,chr6	-,+	ZUFSP,KPNA5	-9708,1655
chr9:35102158-35102694	chr9	+	35102218	35102652	True	NM_032634,NM_006377,NM_152850,NM_013442,NM_001201484	chr9,chr9,chr9,chr9,chr9	-,+,-,-,-	PIGO,UNC13B,PIGO,STOML2,PIGO	-5672,59336,-5620,552,-5672
chr1:150210374-150210808	chr1	+	150210510	150210809	True	NM_012113,NM_001136478,NM_001136479,NM_030920	chr1,chr1,chr1,chr1	+,-,-,-	CA14,ANP32E,ANP32E,ANP32E	19408,-2006,-3484,-2006
chr20:45340071-45340850	chr20	+	45340193	45340845	True	NM_030777,NM_033550	chr20,chr20	+,-	SLC2A10,TP53RK	-1965,-21917
chr7:102035089-102035931	chr7	+	102035168	102035724	True	NM_024653,NM_001146210	chr7,chr7	+,-	PRKRIP1,SPDYE6	1079,-38279
chr9:27295752-27297598	chr9	+	27296438	27297407	True	NM_001161585,NM_020641,NM_000459	chr9,chr9,chr9	-,-,+	C9orf11,C9orf11,TEK	12,12,-187348
chr19:17355389-17355750	chr19	+	17355550	17355798	True	NM_005234,NM_024578	chr19,chr19	-,+	NR2F6,OCEL1	403,-18546
chr9:100670793-100671458	chr9	+	100670888	100671259	True	NM_016481,NM_004473	chr9,chr9	-,+	C9orf156,FOXE1	13648,-55409
chr11:65407960-65408208	chr11	+	65407970	65408206	True	NM_006747,NM_153253,NM_001145138	chr11,chr11,chr11	+,+,-	SIPA1,SIPA1,RELA	-2443,-429,22287
chr6:125513387-125515028	chr6	+	125513390	125514993	True	NM_016063,NM_001003395	chr6,chr6	-,+	HDDC2,TPD52L1	108339,-38028
chr19:36524107-36525552	chr19	+	36524162	36525574	True	NM_001083961,NM_001199570,NM_015526	chr19,chr19,chr19	+,-,-	WDR62,CLIP3,CLIP3	20208,-589,-365
chr15:78562560-78563205	chr15	+	78562596	78563105	True	NM_001130182,NM_001130183,NM_018602,NM_025234	chr15,chr15,chr15,chr15	+,+,+,-	DNAJA4,DNAJA4,DNAJA4,WDR61	-5658,-4087,-6160,28894
chrX:70120143-70121983	chrX	+	70120297	70121307	True	NM_001003811,NM_001170931,NM_031276	chrX,chrX,chrX	-,+,-	TEX11,FOXO4,TEX11	7310,194691,7310
chr2:26779934-26780354	chr2	+	26779964	26780110	True	NM_001105519,NM_194248	chr2,chr2	+,-	C2orf70,OTOF	5370,1506
chr4:48842955-48843411	chr4	+	48843137	48843457	True	NM_001079842,NM_001079839,NM_015030,NM_001168254	chr4,chr4,chr4,chr4	+,+,-,+	OCIAD1,OCIAD1,FRYL,OCIAD1	-9952,-9952,-60821,-9873
chr8:144513576-144513840	chr8	+	144513674	144513852	True	NM_201589,NM_052924	chr8,chr8	-,+	MAFA,RHPN1	-1072,-62700
chr22:31741335-31741611	chr22	+	31741355	31741589	True	NM_014323,NM_004147,NM_032051,NM_032050,NM_032052	chr22,chr22,chr22,chr22,chr22	-,+,-,-,-	PATZ1,DRG1,PATZ1,PATZ1,PATZ1	710,53949,710,710,710
chr8:104513708-104514063	chr8	+	104513943	104514077	True	NM_001100117,NM_030780	chr8,chr8	+,-	RIMS2,SLC25A32	-1025,-86475
chr20:1589121-1589351	chr20	+	1589183	1589393	True	NM_001083910,NM_001040022	chr20,chr20	-,+	SIRPB1,SIRPA	11346,285419
chr20:1589121-1589351	chr20	+	1556155	1556345	False	NM_014723,NM_178460	chr20,chr20	+,-	SNPH,SIRPD	-309246,-17812
chr17:77814887-77815106	chr17	+	77814966	77815032	True	NM_005189,NM_003655	chr17,chr17	+,-	CBX2,CBX4	-63040,-1753
chr11:73588022-73588248	chr11	+	73588134	73588286	True	NM_025155,NM_016565	chr11,chr11	+,-	PAAF1,CHCHD8	-152,-244
chr4:172735115-172735855	chr4	+	172735168	172735836	True	NR_036751,NM_001034845	chr4,chr4	-,+	HSP90AA6P,GALNTL6	-1209033,-644
chr12:51817674-51818299	chr12	+	51817883	51818315	True	NM_001039960,NM_004858,NM_007210	chr12,chr12,chr12	+,+,-	SLC4A8,SLC4A8,GALNT6	278,278,-32683
chr18:56701326-56701702	chr18	+	56701383	56701668	True	NR_024021,NM_013435	chr18,chr18	+,-	LOC390858,RAX	1302,239008
chr19:16940803-16941466	chr19	+	16940819	16941421	True	NM_024104,NM_015260	chr19,chr19	-,+	C19orf42,SIN3B	-169851,-652
chr12:7036109-7036705	chr12	+	7036125	7036585	True	NM_001940,NM_001007026,NR_003010	chr12,chr12,chr12	+,+,-	ATN1,ATN1,SCARNA12	894,-2550,40234
chr1:37921074-37921313	chr1	+	37921126	37921298	True	NM_022756,NM_025079	chr1,chr1	-,+	MEAF6,ZC3H12A	59116,18820
chr11:126173343-126173666	chr11	+	126173346	126173656	True	NM_014026,NM_003139	chr11,chr11	+,-	DCPS,SRPR	-10,-34469
chr1:242686748-242687132	chr1	+	242686811	242687069	True	NM_006027,NM_152666	chr1,chr1	+,-	EXO1,PLD5	-674829,979
chr20:25230644-25231359	chr20	+	25230795	25231395	True	NR_027091,NM_002862	chr20,chr20	-,+	LOC284798,PYGB	-101369,-2140
chr6:33306363-33307496	chr6_qbl_hap6	+	4538814	4539452	False	NM_001350,NM_001185181	chr6_qbl_hap6,chr6_qbl_hap6	-,+	DAXX,PFDN6	-15772,-49211
chr6:33306363-33307496	chr6_mcf_hap5	+	4780313	4780951	False	NM_001350,NM_001185181	chr6_mcf_hap5,chr6_mcf_hap5	-,+	DAXX,PFDN6	-15778,-49209
chr6:33306363-33307496	chr6_cox_hap2	+	4750383	4751021	False	NM_001350,NM_001185181	chr6_cox_hap2,chr6_cox_hap2	-,+	DAXX,PFDN6	-15772,-49209
chr6:33306363-33307496	chr6	+	33306567	33307205	True	NR_024517,NM_001185181	chr6,chr6	-,+	DAXX,PFDN6	-15774,-49207
chr6:33306363-33307496	chr6_dbb_hap3	+	4587891	4588529	False	NM_001350,NM_001185181	chr6_dbb_hap3,chr6_dbb_hap3	-,+	DAXX,PFDN6	-15771,-49205
chrX:45491780-45492034	chrX	+	45491841	45492075	True	NR_029635,NM_021140	chrX,chrX	-,+	MIR221,KDM6A	113669,-759469
chr15:42130311-42130660	chr15	+	42130315	42130709	True	NR_036195,NM_001114633	chr15,chr15	-,+	MIR4310,PLA2G4B	28090,301
chr3:178965959-178967812	chr3	+	178966024	178966677	True	NM_016331,NM_014407,NM_171830	chr3,chr3,chr3	+,-,-	ZNF639,KCNMB3,KCNMB3	74873,2788,3030
chr11:125933372-125934218	chr11	+	125933394	125934003	True	NM_016952,NM_024556	chr11,chr11	-,+	CDON,FAM118B	-207,147615
chr13:99173327-99173833	chr13	+	99173332	99173756	True	NM_003576,NR_036129	chr13,chr13	-,+	STK24,MIR3170	635,-312605
chr11:113570342-113570716	chr11	+	113570366	113570638	True	NM_001101389,NM_030770	chr11,chr11	+,-	CLDN25,TMPRSS5	79879,6480
chr1:1149627-1150102	chr1	+	1149682	1149934	True	NM_004195,NM_148901,NM_148902,NM_003327,NM_080605	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	TNFRSF18,TNFRSF18,TNFRSF18,TNFRSF4,B3GALT6	-7593,-7593,-7593,-134,17694
chr11:92079800-92081491	chr11	+	92079800	92081016	True	NM_152313,NM_001008781	chr11,chr11	-,+	SLC36A4,FAT3	850135,4245
chr10:120632559-120634286	chr10	+	120632729	120634324	True	NM_199461,NM_153810	chr10,chr10	+,-	NANOS1,C10orf46	154903,-117971
chr3:49068055-49069402	chr3	+	49068076	49069374	True	NM_199073,NM_199070,NM_000884,NR_029690,NM_018114,NM_199069	chr3,chr3,chr3,chr3,chr3,chr3	+,+,-,-,-,+	NDUFAF3,NDUFAF3,IMPDH2,MIR191,DALRD3,NDUFAF3	-9512,-9056,-1201,-9934,-9609,-9056
chr3:183895909-183896686	chr3	+	183895914	183896684	True	NM_005787,NM_001025205,NM_018358,NM_004068	chr3,chr3,chr3,chr3	-,+,+,+	ALG3,AP2M1,ABCF3,AP2M1	70125,-3331,7178,-3331
chr15:89787668-89787905	chr15	+	89787720	89787948	True	NM_001113378,NM_000326,NM_018193	chr15,chr15,chr15	+,-,+	FANCI,RLBP1,FANCI	-577,-22798,-577
chr14:99940333-99941624	chr14	+	99940332	99941660	True	NM_032233,NM_001099402,NM_199123	chr14,chr14,chr14	-,+,-	SETD3,CCNK,SETD3	5616,6078,5616
chr11:20621493-20622719	chr11	+	20621541	20622688	True	NM_001029865,NM_004211	chr11,chr11	-,+	DBX1,SLC6A5	-439671,-646
chr9:131265064-131265890	chr9	+	131265238	131265874	True	NM_001003722,NM_001499,NR_029837	chr9,chr9,chr9	+,+,-	GLE1,GLE1,MIR219-2	1096,1096,-110245
chr17:36957195-36958969	chr17	+	36957402	36958618	True	NM_003559,NM_002795	chr17,chr17	-,+	PIP4K2B,PSMB3	-1244,-48452
chr8:120431820-120433349	chr8	+	120431935	120432964	True	NM_002514,NM_001040092	chr8,chr8	+,-	NOV,ENPP2	-3434,218201
chr11:133904253-133904457	chr11	+	133904283	133904457	True	NM_014987,NR_027276	chr11,chr11	-,+	IGSF9B,LOC100128239	-77403,-2167
chr11:124805773-124806171	chr11	+	124805795	124806160	True	NM_152722,NM_001037558	chr11,chr11	-,+	HEPACAM,HEPN1	199,-16700
chr6:73330964-73331221	chr6	+	73330971	73331093	True	NM_019842,NM_001160132,NM_001160133,NM_001160130,NR_036244,NM_001160134	chr6,chr6,chr6,chr6,chr6,chr6	+,+,+,+,-,+	KCNQ5,KCNQ5,KCNQ5,KCNQ5,MIR4282,KCNQ5	477,477,477,477,346433,477
chr12:54378734-54378971	chr12	+	54378758	54378924	True	NR_029617,NR_003716,NM_017409	chr12,chr12,chr12	+,-,+	MIR196A2,HOTAIR,HOXC10	6597,-16243,21
chr1:32931351-32931988	chr1	+	32931352	32932031	True	NM_001145720,NM_018045	chr1,chr1	+,-	ZBTB8B,BSDC1	-745,-71290
chr7:121943421-121943869	chr7	+	121943422	121943909	True	NM_001160264,NM_001024613,NR_036484	chr7,chr7,chr7	-,-,+	FEZF1,FEZF1,LOC154860	706,706,0
chr2:172270849-172271953	chr2	+	172271755	172271838	True	NM_024770,NM_001164821	chr2,chr2	-,+	METTL8,DCAF17	19537,18922
chr15:63889929-63891699	chr15	+	63890114	63891610	True	NR_034080,NM_203373	chr15,chr15	-,+	LOC100130855,FBXL22	1468,-614
chr6:14805566-14807356	chr6	+	14805894	14807248	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	439278,856093
chr2:198669150-198669396	chr2	+	198669149	198669389	True	NM_006226,NM_197970	chr2,chr2	+,-	PLCL1,BOLL	36,-18211
chr12:11082725-11083175	chr12	+	11082778	11083129	True	NM_001110213,NM_023922,NM_005042	chr12,chr12,chr12	+,-,+	PRH2,TAS2R14,PRH2	-996,8732,-997
chr19:9094954-9095555	chr19	+	9095326	9095392	True	NM_001004456,NM_024690	chr19,chr19	+,-	OR1M1,MUC16	108528,-3308
chr3:52351916-52352158	chr3	+	52351947	52352009	True	NM_015512,NR_029677	chr3,chr3	+,-	DNAH1,MIR135A1	-1663,-23623
chr14:105198347-105199795	chr14	+	105198445	105199729	True	NM_199165,NM_005163,NM_152328	chr14,chr14,chr14	+,-,+	ADSSL1,AKT1,ADSSL1	-2268,60259,-7962
chr2:96701155-96701417	chr2	+	96701154	96701438	True	NM_207328,NR_003698	chr2,chr2	-,+	GPAT2,LOC729234	-427,-24906
chr2:96701155-96701417	chr2	-	96454638	96454922	False	NM_207328,NM_138800	chr2,chr2	-,+	GPAT2,TRIM43	245855,-196923
chr9:88351069-88352780	chr9	+	88351091	88352655	True	NR_029410,NM_015239	chr9,chr9	+,-	LOC389765,AGTPBP1	68261,4347
chr3:54964762-54965372	chr3	+	54964773	54965219	True	NM_018398,NM_020678	chr3,chr3	+,-	CACNA2D3,LRTM1	-808138,-2701
chr12:56859047-56860692	chr12	+	56859340	56860370	True	NM_012064,NM_207344	chr12,chr12	-,+	MIP,SPRYD4	-10905,1930
chr22:17601267-17601472	chr22	+	17601310	17601378	True	NM_031890,NM_001163079,NM_014339	chr22,chr22,chr22	-,-,+	CECR6,CECR6,IL17RA	885,929,-35510
chr13:41332200-41333456	chr13	+	41332517	41333206	True	NM_005830,NM_014252	chr13,chr13	-,+	MRPS31,SLC25A15	12192,30340
chr7:124570815-124571123	chr7	+	124571015	124571089	True	NR_003102,NR_003103,NM_001042594,NR_003104,NM_015450,NM_001174046	chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,+	POT1,POT1,POT1,POT1,POT1,SPAM1	-978,-978,-978,-978,-978,-1005157
chr20:48772244-48772831	chr20	+	48772247	48772694	True	NM_001162505,NM_199129,NR_027889,NM_005194,NM_199203	chr20,chr20,chr20,chr20,chr20	-,-,-,+,-	TMEM189,TMEM189,TMEM189,CEBPB,TMEM189-UBE2V1	-1912,-1912,-1912,34681,-1912
chrY:14387173-14388599	chrY	+	14387212	14388443	True	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	385854,145011
chr19:15345471-15345934	chr19	+	15345569	15345769	True	NM_033025,NM_001142886,NM_024794	chr19,chr19,chr19	+,-,-	SYDE1,EPHX3,EPHX3	-127413,-1711,-2338
chr7:94283928-94284655	chr7	+	94283994	94284559	True	NM_003919,NM_001099401,NM_001099400,NM_001184961,NM_015068,NM_001172438,NM_001184962,NM_001172437,NM_001040152	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,+,+,+,+,+,+	SGCE,SGCE,SGCE,PEG10,PEG10,PEG10,PEG10,PEG10,PEG10	1012,1012,1012,1077,1077,1122,1077,1122,1077
chr3:32725402-32726577	chr3	+	32725708	32726513	True	NM_016141,NM_015442	chr3,chr3	-,+	DYNC1LI1,CNOT10	-113342,184
chr2:153199320-153200103	chr2	+	153199351	153200149	True	NM_052905,NM_005843	chr2,chr2	+,-	FMNL2,STAM2	-7663,-166845
chr11:13690982-13691997	chr11	+	13691001	13691605	True	NM_032228,NM_000315	chr11,chr11	+,-	FAR1,PTH	-846,-173434
chr15:58358809-58359360	chr15	+	58358862	58359209	True	NM_170696,NM_020980,NM_003888	chr15,chr15,chr15	-,+,-	ALDH1A2,AQP9,ALDH1A2	-956,71198,-956
chr14:102281502-102282165	chr14	+	102281611	102281969	True	NM_002719,NM_178587,NM_178586,NR_031649	chr14,chr14,chr14,chr14	+,+,+,-	PPP2R5C,PPP2R5C,PPP2R5C,MIR1247	-5522,-5522,-5522,-254852
chr12:58339807-58340331	chr12	+	58339941	58340234	True	NM_005730,NM_033276	chr12,chr12	-,+	CTDSP2,XRCC6BP1	-99194,-4551
chr20:62336446-62337324	chr20	+	62336523	62337269	True	NM_032527,NM_003823,NM_003224,NM_001195653,NM_001195654,NM_181485,NM_001083113,NM_001134758	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,+,-,+,+,+,+,-	ZGPAT,TNFRSF6B,ARFRP1,ZGPAT,ZGPAT,ZGPAT,ZGPAT,ARFRP1	2110,-8570,2142,2110,2110,2110,1524,2142
chr9:124855622-124856279	chr9	+	124855632	124856070	True	NM_001139442,NM_194252,NM_198469	chr9,chr9,chr9	-,-,+	TTLL11,TTLL11,MORN5	-47,-47,66119
chr2:91935370-91935591	chr2	+	91935394	91935514	True	NR_003503,NR_027238	chr2,chr2	+,-	GGT8P,LOC654342	27853,-87419
chr17:36452839-36453126	chr17	+	36452900	36453118	True	NR_036750,NM_032351	chr17,chr17	-,+	LOC440434,MRPL45	-39644,17
chr17:36452839-36453126	chr17	-	45569856	45569926	False	NR_033934,NM_006310	chr17,chr17	-,+	MRPL45P2,NPEPPS	110,38517
chr2:185524692-185526422	chr2	+	185525243	185526323	True	NM_194250,NM_205842	chr2,chr2	+,-	ZNF804A,NCKAP1	-62211,-1622014
chr7:136554251-136554479	chr7	+	136554412	136554496	True	NM_001006632,NM_001006630,NM_001006627,NM_001006631,NM_001006629,NM_001006628,NM_001006626,NM_000739,NM_002825	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,+,+,+,+,-	CHRM2,CHRM2,CHRM2,CHRM2,CHRM2,CHRM2,CHRM2,CHRM2,PTN	-631,-1064,-1064,-631,-479,-470,-594,-631,474100
chr14:65169978-65170270	chr14	+	65169998	65170276	True	NM_015549,NM_001024858	chr14,chr14	+,-	PLEKHG3,SPTB	916,119640
chr1:37942212-37943077	chr1	+	37942311	37943081	True	NM_022756,NM_025079	chr1,chr1	-,+	MEAF6,ZC3H12A	37333,-2243
chr6:25849712-25850128	chr6	+	25849716	25850128	True	NM_005074,NM_005495	chr6,chr6	-,+	SLC17A1,SLC17A4	-17429,-94857
chr20:52689836-52691331	chr20	+	52690022	52691370	True	NM_003657,NM_002623	chr20,chr20	-,+	BCAS1,PFDN4	-2718,133131
chr5:154236514-154237162	chr5	+	154236526	154236991	True	NM_032385,NM_004779	chr5,chr5	-,+	C5orf4,CNOT8	-6313,1206
chr20:56286669-56287002	chr20	+	56286757	56286937	True	NM_020182,NM_199169,NM_002591,NM_199170,NM_199171	chr20,chr20,chr20,chr20,chr20	-,-,+,-,-	PMEPA1,PMEPA1,PCK1,PMEPA1,PMEPA1	-1726,-1132,-150671,-1132,-216
chr10:133110985-133111980	chr10	+	133111135	133111605	True	NM_018461,NM_174937	chr10,chr10	+,-	PPP2R2D,TCERG1L	636354,-1151
chr21:44746626-44747183	chr21	+	44746661	44747113	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	122790,99939
chr1:12290527-12290886	chr1	+	12290650	12290914	True	NM_138346,NM_018156,NM_015378	chr1,chr1,chr1	-,+,+	KIAA2013,VPS13D,VPS13D	-304165,-588,-588
chr5:176827159-176827414	chr5	+	176827163	176827367	True	NM_001029886,NM_000505,NM_003052	chr5,chr5,chr5	-,-,+	PFN3,F12,SLC34A1	320,9260,-15782
chr17:46685708-46687526	chr17	+	46685835	46687548	True	NM_004502,NM_024016,NM_018952,NR_033205	chr17,chr17,chr17,chr17	-,-,-,+	HOXB7,HOXB8,HOXB6,LOC404266	885,4803,-3501,-12566
chr17:74551750-74552842	chr17	+	74551859	74552817	True	NM_134268,NR_004396,NR_004397,NR_004395	chr17,chr17,chr17,chr17	-,+,+,+	CYGB,SNORD1B,SNORD1C,SNORD1A	-18077,4372,2056,4897
chr15:43213228-43213694	chr15	+	43213326	43213734	True	NM_024956,NM_173500	chr15,chr15	+,-	TMEM62,TTBK2	211987,-319
chr19:41594877-41595705	chr19	+	41595123	41595697	True	NM_030589,NM_000766	chr19,chr19	-,+	CYP2A7,CYP2A13	-206466,-806
chr17:10100236-10100597	chr17	+	10100241	10100645	True	NM_201433,NM_004246	chr17,chr17	-,+	GAS7,GLP2R	1279,-370911
chr4:74968327-74969487	chr4	+	74968415	74969339	True	NM_001144978,NM_002089	chr4,chr4	+,-	MTHFD2L,CXCL2	54489,-3418
chrX:102585281-102585568	chrX	+	102585285	102585591	True	NM_152278,NM_032621	chrX,chrX	+,-	TCEAL7,BEX2	-222,-19311
chr9:127177156-127177465	chr9	+	127177181	127177451	True	NM_002799,NM_001161808	chr9,chr9	-,+	PSMB7,GPR144	320,35971
chr5:68457798-68458834	chr5	+	68458393	68458461	True	NM_176816,NM_031966	chr5,chr5	-,+	CCDC125,CCNB1	157999,4451
chrX:125299482-125299707	chrX	+	125299515	125299637	True	NM_001013628,NM_001122716	chrX,chrX	-,+	DCAF12L2,CXorf64	493,654109
chr4:38668830-38669542	chr4	+	38668907	38669494	True	NM_016531,NR_026804	chr4,chr4	+,-	KLF3,FLJ13197	-3168,-2658
chr22:50700344-50700549	chr22	+	50700480	50700548	True	NM_031454,NM_002969,NM_002751	chr22,chr22,chr22	+,-,-	SELO,MAPK12,MAPK11	-61123,-391,8281
chr18:14129768-14131421	chr18	+	14130023	14131404	True	NR_033354,NR_026756,NM_145287	chr18,chr18,chr18	-,+,-	ZNF519,LOC284233,ZNF519	1140,206017,1140
chr3:9812531-9814512	chr3	+	9812577	9814441	True	NM_001024959,NM_003656,NM_016829	chr3,chr3,chr3	+,-,+	ARPC4,CAMK1,OGG1	19737,-909,-21000
chr17:38520917-38521849	chr17	+	38520936	38521588	True	NM_001024809,NM_152219	chr17,chr17	+,-	RARA,GJD3	-22716,9
chr12:50018550-50020494	chr12	+	50018714	50020508	True	NM_012272,NM_001031698,NM_032130	chr12,chr12,chr12	+,+,-	PRPF40B,PRPF40B,FAM186B	-1362,3818,-19281
chr19:37663742-37664339	chr19	+	37663768	37664301	True	NM_152655,NM_152604,NM_199126	chr19,chr19,chr19	-,+,-	ZNF585A,ZNF383,ZNF585A	-153,53064,-435
chrX:17754117-17755658	chrX	+	17754169	17755704	True	NM_006746,NM_001037540,NR_033348,NM_001037535,NM_001037536	chrX,chrX,chrX,chrX,chrX	+,+,-,+,+	SCML1,SCML1,RAI2,SCML1,SCML1	-113,-113,123293,-113,-113
chr1:175712380-175713183	chr1	+	175712484	175713160	True	NM_003285,NM_022093	chr1,chr1	-,+	TNR,TNN	64,-675541
chr1:1948230-1948729	chr1	+	1948337	1948531	True	NM_000815,NM_001080484	chr1,chr1	+,-	GABRD,KIAA1751	2236,-13061
chr7:73148678-73149251	chr7	+	73148890	73149224	True	NM_148912,NM_148913,NR_026910,NR_026912,NR_026690,NM_001145364	chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,+,-	ABHD11,ABHD11,ABHD11,ABHD11,WBSCR26,ABHD11	4010,4010,4010,4016,174,4010
chr15:32320271-32321228	chr15	+	32320345	32321070	True	NM_001190455,NM_000746,NM_130901	chr15,chr15,chr15	+,+,-	CHRNA7,CHRNA7,OTUD7A	1620,1620,-372803
chr19:10530239-10530710	chr19	+	10530359	10530551	True	NM_007065,NM_001111307	chr19,chr19	-,+	CDC37,PDE4A	-16088,781
chr4:76649380-76649609	chr4	+	76649390	76649596	True	NM_203505,NM_003715	chr4,chr4	-,+	G3BP2,USO1	-50723,232
chr20:62497099-62497548	chr20	+	62497137	62497420	True	NM_080622,NM_025224,NM_199359,NM_003288,NM_199363,NM_199362,NM_199361,NM_199360	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,-,+,+,+,+,+,+	ABHD16B,ZBTB46,TPD52L2,TPD52L2,TPD52L2,TPD52L2,TPD52L2,TPD52L2	-4622,-60281,-598,-598,-598,-598,-598,-598
chr1:27710268-27712135	chr1	+	27710573	27711981	True	NM_207397,NM_005281,NM_003665,NM_173452	chr1,chr1,chr1,chr1	-,+,-,-	CD164L2,GPR3,FCN3,FCN3	-768,7170,-9258,-9258
chr10:117063028-117064389	chr10	+	117063028	117064406	True	NM_207303,NM_001003408	chr10,chr10	+,-	ATRNL1,ABLIM1	-209963,-618614
chr10:74114918-74115625	chr10	+	74114980	74115490	True	NM_019058,NM_017626,NM_001002762	chr10,chr10,chr10	+,-,-	DDIT4,DNAJB12,DNAJB12	-81355,-73,-73
chr17:79921189-79921963	chr17	+	79921743	79921897	True	NM_178493,NM_024083	chr17,chr17	-,+	NOTUM,ASPSCR1	-2686,13528
chr8:98290217-98290595	chr8	+	98290280	98290632	True	NM_033512,NM_178812	chr8,chr8	-,+	TSPYL5,MTDH	-104,365774
chr22:48887521-48888315	chr22	+	48887682	48888252	True	NR_033377,NM_001082967	chr22,chr22	-,+	FLJ46257,FAM19A5	-860364,-2445
chr1:110910609-110911941	chr1	+	110910835	110911946	True	NM_001201546,NM_022768	chr1,chr1	-,+	SLC16A4,RBM15	21813,-28955
chr3:11321292-11321823	chr3	+	11321427	11321695	True	NM_006395,NM_001144912,NM_001136031,NM_001128221	chr3,chr3,chr3,chr3	+,+,+,-	ATG7,ATG7,ATG7,VGLL4	-7476,-7476,-7476,288763
chr16:56481747-56482958	chr16	+	56481799	56482762	True	NM_018233,NM_007006	chr16,chr16	+,-	OGFOD1,NUDT21	2661,2556
chr1:202092003-202092294	chr1	+	202092056	202092294	True	NM_004767,NM_138795	chr1,chr1	+,-	GPR37L1,ARL8A	-78,21622
chr17:42092448-42092920	chr17	+	42092452	42092702	True	NM_032376,NM_153006	chr17,chr17	-,+	TMEM101,NAGS	-107,-10471
chr22:25597304-25597567	chr22	+	25597307	25597609	True	NM_004076,NM_182492	chr22,chr22	+,-	CRYBB3,LRP5L	-1533,160965
chr18:70213642-70215171	chr18	+	70213911	70215215	True	NM_014177,NM_182511	chr18,chr18	+,-	C18orf55,CBLN2	1600530,-2188
chrX:128656918-128657258	chrX	+	128657063	128657307	True	NM_003069,NM_000276,NM_139035	chrX,chrX,chrX	-,+,-	SMARCA1,OCRL,SMARCA1	203,16944,203
chr5:180627714-180628621	chr5	+	180627769	180628419	True	NM_203295,NM_203294,NM_203297,NM_203296,NM_033342,NM_203293,NM_033549	chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,-,-,+	TRIM7,TRIM7,TRIM7,TRIM7,TRIM7,TRIM7,TRIM41	2979,2979,3,2979,3816,3816,21886
chr3:48670419-48670715	chr3	+	48670423	48670757	True	NM_001040454,NM_134263,NM_033629,NM_022911,NM_134426	chr3,chr3,chr3,chr3,chr3	-,-,+,-,-	SLC26A6,SLC26A6,TREX1,SLC26A6,SLC26A6	572,2219,-163245,2219,2219
chr12:49322473-49322696	chr12	+	49322542	49322606	True	NM_001143782,NM_001143781,NM_033124,NM_016594	chr12,chr12,chr12,chr12	-,-,+,-	FKBP11,FKBP11,CCDC65,FKBP11	-3212,-3878,-24700,-3212
chr11:66625104-66625355	chr11	+	66625267	66625397	True	NM_024036,NM_022172	chr11,chr11	+,-	LRFN4,PC	-442,49993
chr1:40040048-40041381	chr1	+	40040120	40041299	True	NM_001135653,NM_003819,NM_001135654,NR_002983,NM_181809	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	PABPC4,PABPC4,PABPC4,SNORA55,BMP8A	1272,1272,1272,-6938,-82860
chr15:25467028-25467346	chr15	+	25467175	25467343	True	NR_003358,NR_003495,NR_003496,NR_003497,NR_003346,NR_003344,NR_003345,NR_003351,NR_003347,NM_130838,NR_003342,NR_003343,NR_003303,NR_003348	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,-,+,+,+,+	SNORD115-43,SNORD115-24,HBII-52-27,HBII-52-28,SNORD115-31,SNORD115-29,SNORD115-30,SNORD115-36,SNORD115-32,UBE3A,SNORD115-25,SNORD115-26,SNORD115-11,SNORD115-33	1049,-8420,-1576,157,4912,1049,3006,1049,6770,183360,-6538,-3462,1049,8641
chr10:35379558-35380131	chr10	+	35379595	35380167	True	NM_001198777,NM_003591,NM_001881	chr10,chr10,chr10	-,-,+	CUL2,CUL2,CREM	-25,-284,35633
chr11:88712461-88713710	chr11	+	88712663	88713589	True	NM_001143831,NM_000372	chr11,chr11	-,+	GRM5,TYR	67701,197450
chr4:8159229-8159490	chr4	+	8159317	8159485	True	NM_001130083,NM_001130087,NM_001130086,NM_001130085,NM_001130084,NM_001130088,NM_032432,NM_018986	chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4	-,-,-,-,-,-,-,+	ABLIM2,ABLIM2,ABLIM2,ABLIM2,ABLIM2,ABLIM2,ABLIM2,SH3TC1	1124,1124,1124,1124,1124,1124,1124,41574
chr9:46292916-46293882	chr9	+	46293488	46293922	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2662758,393643
chr9:46292916-46293882	chr9	+	67702608	67702846	False	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	91393,223914
chr9:46292916-46293882	chr9	-	46210548	46210598	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2579818,476967
chr9:46292916-46293882	chr9	-	45089296	45089534	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-99111,-1458566
chr18:55720417-55720631	chr18	+	55720419	55720545	True	NM_001144967,NM_015277,NM_001144964,NM_005603	chr18,chr18,chr18,chr18	+,+,+,-	NEDD4L,NEDD4L,NEDD4L,ATP8B1	-8851,-8851,-6012,-250092
chr16:27325670-27325891	chr16	+	27325786	27325891	True	NM_000418,NM_001008699,NM_145080	chr16,chr16,chr16	+,+,-	IL4R,IL4R,NSMCE1	-586,-586,-45673
chrX:153688204-153688517	chrX	+	153688260	153688504	True	NM_017514,NM_006014	chrX,chrX	+,-	PLXNA3,LAGE3	-1688,19142
chr1:193075799-193077622	chr1	+	193076336	193077291	True	NM_197962,NM_024529,NM_016066	chr1,chr1,chr1	-,+,-	GLRX2,CDC73,GLRX2	-1780,13796,-1092
chr14:75567557-75567845	chr14	+	75567585	75567817	True	NM_033116,NM_024643	chr14,chr14	-,+	NEK9,FAM164C	26011,-31345
chr1:154378150-154378397	chr1	+	154378168	154378302	True	NM_001010846,NM_181359,NM_000565	chr1,chr1,chr1	-,+,+	SHE,IL6R,IL6R	96274,-550,-550
chr5:140810598-140810803	chr5	+	140810673	140810851	True	NM_005642,NR_001297,NM_032094,NM_003735	chr5,chr5,chr5,chr5	-,+,+,+	TAF7,PCDHGB8P,PCDHGA12,PCDHGA12	-110322,-4878,-573,-573
chr22:29073494-29074505	chr22	+	29074066	29074550	True	NM_001145418,NM_172002	chr22,chr22	-,+	TTC28,HSCB	1353,63492
chrX:153706523-153706956	chrX	+	153706606	153706916	True	NM_014235,NM_017514,NM_006014	chrX,chrX,chrX	-,+,-	UBL4A,PLXNA3,LAGE3	8066,-20034,730
chr5:141298267-141299123	chr5	+	141298813	141299091	True	NM_014773,NR_033244,NM_001142603	chr5,chr5,chr5	+,-,+	KIAA0141,LOC729080,KIAA0141	4293,-22553,4293
chr9:127902661-127904439	chr9	+	127903500	127904184	True	NM_001144877,NM_001174152,NM_173690	chr9,chr9,chr9	-,+,-	SCAI,RABEPK,SCAI	1706,58636,1706
chr5:131404930-131405188	chr5	+	131404981	131405237	True	NM_001205250,NM_000588,NM_000758	chr5,chr5,chr5	-,+,+	ACSL6,IL3,CSF2	-57220,-8685,4247
chr12:111841786-111842685	chr12	+	111841943	111842595	True	NM_144671,NM_005475	chr12,chr12	-,+	FAM109A,SH2B3	-35018,1156
chr11:68517162-68517527	chr11	+	68517169	68517530	True	NM_001039656,NM_015973,NM_004923	chr11,chr11,chr11	-,+,-	MTL5,GAL,MTL5	1508,-65243,1508
chr7:112555215-112556542	chr7	+	112555345	112556447	True	NM_152556,NM_182597	chr7,chr7	-,+	C7orf60,C7orf53	23535,-434334
chr3:48472276-48473052	chr3	+	48472501	48472903	True	NM_024661,NM_001130082,NM_015933,NM_002673	chr3,chr3,chr3,chr3	-,-,+,-	CCDC51,PLXNB1,CCDC72,PLXNB1	8676,-1041,8782,-1629
chr17:80274340-80274562	chr17	+	80274422	80274606	True	NM_207459,NM_006137	chr17,chr17	+,-	TEX19,CD7	42516,924
chr8:120886545-120886888	chr8	+	120886620	120886842	True	NM_024094,NM_022783	chr8,chr8	-,+	DSCC1,DEPTOR	-18450,-776
chr9:37423323-37424734	chr9	+	37423775	37424485	True	NM_012203,NM_014872	chr9,chr9	+,-	GRHPR,ZBTB5	-1119,40972
chr11:44929147-44929874	chr11	+	44929200	44929914	True	NR_026681,NM_001076787	chr11,chr11	+,-	LOC221122,TP53I11	65538,42744
chr5:180690749-180691947	chr5	+	180690761	180691117	True	NM_201627	chr5	+	TRIM41	-40506
chr12:119616911-119617179	chr12	+	119616980	119617142	True	NR_024246,NM_014365	chr12,chr12	-,+	LOC144742,HSPB8	124093,-436
chr4:135123455-135123895	chr4	+	135123477	135123839	True	NM_032961,NM_001114734	chr4,chr4	+,-	PCDH10,PABPC4L	-1053071,-574
chr2:203132407-203133027	chr2	+	203132444	203132788	True	NR_003058,NM_015934,NM_003352	chr2,chr2,chr2	+,+,-	SNORD70,NOP58,SUMO1	8365,-1980,-29122
chr14:23235280-23235901	chr14	+	23235443	23235935	True	NM_005015,NM_001126105	chr14,chr14	+,-	OXA1L,SLC7A7	-23,49187
chr7:107532024-107533081	chr7	+	107532052	107532894	True	NM_000111,NM_000108	chr7,chr7	-,+	SLC26A3,DLD	-88374,-517
chr4:185656759-185657811	chr4	+	185656918	185657450	True	NM_152683,NM_024629	chr4,chr4	+,-	CCDC111,MLF1IP	-86205,-1632
chr1:241680595-241682442	chr1	+	241680594	241682282	True	NM_003679,NM_000143	chr1,chr1	+,-	KMO,FH	13397,853
chr16:48656782-48657056	chr16	+	48656796	48656856	True	NM_153029,NM_031490	chr16,chr16	-,+	N4BP1,LONP2	-12676,-378636
chr6:39013161-39014061	chr6	+	39013257	39013765	True	NM_002062,NM_018322	chr6,chr6	+,-	GLP1R,C6orf64	2791,69150
chr1:78258829-78259767	chr1	+	78258884	78259126	True	NM_201626,NM_198549	chr1,chr1	-,+	USP33,FAM73A	-33347,-13626
chr17:65242429-65242849	chr17	+	65242597	65242879	True	NM_014877,NM_012417	chr17,chr17	-,+	HELZ,PITPNC1	-1278,131044
chr6:52149889-52151148	chr6	+	52149925	52151199	True	NM_133367,NM_002388	chr6,chr6	+,-	PAQR8,MCM3	75726,-343
chr1:32573393-32573811	chr1	+	32573528	32573668	True	NM_012316,NM_019118	chr1,chr1	+,-	KPNA6,TMEM234	25,114308
chr15:101457884-101458307	chr15	+	101458020	101458202	True	NM_001040616,NM_024652	chr15,chr15	-,+	LINS,LRRK1	-315575,1257
chr8:11986269-11987132	chr8	+	11986416	11987103	True	NM_201402,NR_003275,NR_027425	chr8,chr8,chr8	-,-,+	USP17L2,LOC392196,FAM66D	9223,-84,-13176
chr8:11986269-11987132	chr8	-	7199687	7199737	False	NR_027423,NR_003668	chr8,chr8	-,+	FAM66B,DEFB109P1B	13189,-29370
chr4:189022347-189023138	chr4	+	189022398	189023013	True	NM_173553,NM_178556	chr4,chr4	-,+	TRIML2,TRIML1	3447,37584
chr17:73203095-73203437	chr17	+	73203097	73203245	True	NM_001005849,NM_024844	chr17,chr17	-,+	SUMO2,NUP85	-23999,-1558
chr8:124541721-124543310	chr8	+	124541838	124542626	True	NM_148177,NM_018024	chr8,chr8	-,+	FBXO32,WDYHV1	1807,-112924
chr7:112094541-112095079	chr7	+	112094541	112094796	True	NM_001197079,NM_014705,NM_001550	chr7,chr7,chr7	+,-,+	IFRD1,DOCK4,IFRD1	-2483,-248079,-4113
chr5:274134-275869	chr5	+	274205	275898	True	NM_145265,NM_013232	chr5,chr5	-,+	CCDC127,PDCD6	-55908,-2521
chr9:124028650-124029278	chr9	+	124028787	124029321	True	NM_198252,NM_001127663,NM_001127662,NM_016322,NM_001127667,NM_001127666,NM_001127665,NM_001127664	chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9	+,+,+,-,+,+,+,+	GSN,GSN,GSN,RAB14,GSN,GSN,GSN,GSN	1058,1058,1058,-64422,1058,1058,1058,1058
chr20:42295953-42296203	chr20	+	42296163	42296251	True	NM_001008901,NM_002466	chr20,chr20	-,+	GTSF1L,MYBL2	59441,-505
chr2:67624737-67625153	chr2	+	67624744	67625168	True	NM_019002,NM_001190263	chr2,chr2	+,-	ETAA1,C1D	-353,665041
chr12:49259995-49260487	chr12	+	49259995	49260362	True	NM_014470,NM_033124	chr12,chr12	-,+	RND1,CCDC65	-342,37530
chr14:23066313-23067000	chr14	+	23066420	23066998	True	NM_022060,NM_001344	chr14,chr14	+,-	ABHD4,DAD1	148,-8277
chr11:111945407-111946303	chr11	+	111945478	111945974	True	NM_018195,NM_138789,NM_001082969,NM_001082970,NM_001082619	chr11,chr11,chr11,chr11,chr11	+,-,+,+,-	C11orf57,PIH1D2,C11orf57,C11orf57,PIH1D2	-561,-583,-561,-561,-583
chr22:18594843-18596082	chr22	+	18595025	18596013	True	NM_001136004,NM_001193414,NM_018943	chr22,chr22,chr22	-,+,+	MICAL3,TUBA8,TUBA8	-87700,-1635,-1635
chr12:80890030-80890866	chr12	+	80890029	80890799	True	NR_030348,NM_001145026	chr12,chr12	-,+	MIR617,PTPRQ	335659,-51961
chrX:75555745-75556697	chrX	+	75555744	75556740	True	NM_020932,NM_138703	chrX,chrX	+,-	MAGEE1,MAGEE2	91305,-550665
chr11:18015360-18015945	chr11	+	18015378	18015781	True	NM_012139,NM_054031	chr11,chr11	-,+	SERGEF,MRGPRX3	18908,126720
chr6:44282519-44284178	chr6	+	44282785	44284140	True	NM_145026,NM_020745	chr6,chr6	+,-	SPATS1,AARS2	26256,-1722
chr4:71767146-71767681	chr4	+	71767270	71767650	True	NM_002092,NM_173468	chr4,chr4	-,+	GRSF1,MOBKL1A	-61643,413
chr20:30432677-30432899	chr20	+	30432676	30432914	True	NM_004118,NM_001008409,NM_033118	chr20,chr20,chr20	-,+,+	FOXS1,TTLL9,MYLK2	556,25590,-25549
chr20:25175762-25175992	chr20	+	25175853	25175929	True	NR_027091,NM_001114089,NM_001247	chr20,chr20,chr20	-,+,+	LOC284798,ENTPD6,ENTPD6	-46427,409,409
chr1:175699367-175700091	chr1	+	175699436	175700052	True	NM_003285,NM_022093	chr1,chr1	-,+	TNR,TNN	12750,-662494
chr19:38925553-38926843	chr19	+	38925779	38926435	True	NM_170604,NM_001146204,NM_001146205,NM_001146206,NM_001146207,NM_001146202,NM_001146203,NM_000540,NM_001042723	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,+,+	RASGRP4,RASGRP4,RASGRP4,RASGRP4,RASGRP4,RASGRP4,RASGRP4,RYR1,RYR1	-8834,-8834,-8834,-8834,-8834,-8834,-8834,-1493,-1493
chr4:162978815-162979738	chr4	+	162979128	162979492	True	NM_006174,NM_001128427	chr4,chr4	+,-	NPY5R,FSTL5	1285598,105754
chr1:206517686-206519506	chr1	+	206517858	206519488	True	NM_001042758,NM_015326,NM_001007544,NM_001170637	chr1,chr1,chr1,chr1	+,+,-,+	SRGAP2,SRGAP2,C1orf186,SRGAP2	-1709,-1709,-229211,-1709
chr1:206517686-206519506	chr1	+	144055162	144056793	False	NM_207418,NR_034178	chr1,chr1	-,+	FAM72D,SRGAP2P2	-142019,-139465
chr8:38241370-38241735	chr8	+	38241491	38241775	True	NM_017778,NM_001199660,NM_023034,NM_001199659,NM_144652	chr8,chr8,chr8,chr8,chr8	-,+,-,+,+	WHSC1L1,LETM2,WHSC1L1,LETM2,LETM2	-1701,2873,-1701,2183,2183
chr2:85132628-85132854	chr2	+	85132775	85132855	True	NM_021103,NM_001080824	chr2,chr2	+,-	TMSB10,C2orf89	-63,-24523
chr15:84322045-84322275	chr15	+	84322049	84322297	True	NM_207517,NM_001717	chr15,chr15	+,-	ADAMTSL3,BNC1	540,-368581
chr10:21807213-21807698	chr10	+	21807241	21807687	True	NM_207371,NM_001195627	chr10,chr10	-,+	C10orf140,MLLT10	6974,15413
chr7:93633170-93633465	chr7	+	93633185	93633455	True	NM_004126,NM_005868	chr7,chr7	+,-	GNG11,BET1	-82222,285
chr17:7580345-7582065	chr17	+	7580557	7581245	True	NM_001143991,NM_001143990,NM_000546,NM_001126116,NM_001126117,NM_001126114,NM_001126115,NM_001126112,NM_001126113	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,-,-,-,-,-,-,-	WRAP53,WRAP53,TP53,TP53,TP53,TP53,TP53,TP53,TP53	9512,8143,9668,-1746,-1746,9668,-1746,9668,9668
chr10:124909250-124909512	chr10	+	124909258	124909536	True	NM_001007793,NM_004725,NM_022466,NM_005519	chr10,chr10,chr10,chr10	+,+,-,+	BUB3,BUB3,IKZF5,HMX2	4223,4223,-140947,-1671
chr19:15128726-15129088	chr19	+	15128848	15128918	True	NM_173482,NM_005071	chr19,chr19	+,-	CCDC105,SLC1A6	-7362,-45118
chrX:47862975-47863521	chrX	+	47863297	47863417	True	NM_001007088,NM_205856,NM_006962,NM_001178099,NM_001079900	chrX,chrX,chrX,chrX,chrX	-,+,-,-,+	ZNF182,SPACA5,ZNF182,ZNF182,SPACA5B	10,316,10,27,3752
chr8:124544137-124545970	chr8	+	124544289	124545723	True	NM_148177,NM_018024,NM_058229	chr8,chr8,chr8	-,+,-	FBXO32,WDYHV1,FBXO32	94,-115375,7786
chr9:139293331-139293623	chr9	+	139293451	139293651	True	NM_003086,NM_015160	chr9,chr9	-,+	SNAPC4,PMPCA	-562,11464
chr2:241568255-241568472	chr2	+	241568260	241568460	True	NM_005301,NM_001102467	chr2,chr2	+,-	GPR35,AQP12B	-3649,53907
chr10:50398956-50399532	chr10	+	50399059	50399564	True	NM_001010863,NM_001135196	chr10,chr10	-,+	C10orf128,C10orf71	-2652,107622
chr6:38559680-38560382	chr6	+	38560042	38560414	True	NM_152733,NM_001172418,NM_001371	chr6,chr6,chr6	-,-,+	BTBD9,BTBD9,DNAH8	3479,3479,130137
chr16:14930036-14930601	chr16	+	14930035	14930316	True	NR_023387,NM_014287	chr16,chr16	-,+	ABCC6P2,NOMO1	-11476,-2443
chr16:25268232-25268733	chr16	+	25268299	25268761	True	NM_001012981,NM_001169	chr16,chr16	-,+	ZKSCAN2,AQP8	144,-40065
chr6:143892762-143893780	chr6	+	143892793	143893549	True	NM_001100166,NR_027114,NR_027113	chr6,chr6,chr6	+,-,-	PHACTR2,LOC285740,LOC285740	35767,-9608,-2317
chr1:155243241-155243889	chr1	+	155243276	155243891	True	NM_003993,NM_020897	chr1,chr1	-,+	CLK2,HCN3	5,3482
chr2:70351178-70351510	chr2	+	70351188	70351530	True	NM_006196,NR_024444	chr2,chr2	+,-	PCBP1,LOC100133985	-36654,968
chr7:73183528-73183760	chr7	+	73183617	73183753	True	NM_001306,NR_026690	chr7,chr7	-,+	CLDN3,WBSCR26	897,-34269
chr11:65795677-65796659	chr11	+	65795775	65796465	True	NM_001323,NM_053054	chr11,chr11	+,-	CST6,CATSPER1	-16377,-1787
chr6:72131015-72131265	chr6	+	72131021	72131279	True	NM_024576,NR_026807	chr6,chr6	+,-	OGFRL1,C6orf155	-132595,-573
chr22:20396693-20396959	chr22	+	20396693	20396775	True	NR_003563,NR_026919	chr22,chr22	-,+	PI4KAP1,LOC150197	1970,-202889
chr22:20396693-20396959	chr22	+	21086871	21086921	False	NM_002650,NR_026815	chr22,chr22	-,+	PI4KA,TMEM191A	2084,-31520
chr22:20396693-20396959	chr22	+	21840681	21840751	False	NM_015094,NR_003700	chr22,chr22	+,-	HIC2,PI4KAP2	-69039,31079
chrY:2811596-2812919	chrY	+	2811662	2812699	True	NM_003411,NM_001145275,NM_001145276,NM_003140	chrY,chrY,chrY,chrY	+,+,+,-	ZFY,ZFY,ZFY,SRY	-8203,-8203,-8609,-155870
chr18:74535748-74536815	chr18	+	74535953	74536767	True	NM_007345,NM_001025081	chr18,chr18	+,-	ZNF236,MBP	112,192338
chr17:18222179-18222570	chr17	+	18222198	18222554	True	NM_004618,NM_144775	chr17,chr17	-,+	TOP3A,SMCR8	-3877,-3655
chr17:25798183-25798496	chr17	+	25798210	25798480	True	NM_014238,NM_000625	chr17,chr17	+,-	KSR1,NOS2	555,329125
chrX:153145870-153147650	chrX	+	153146178	153147282	True	NM_000425,NM_001143963,NM_024003,NR_027419	chrX,chrX,chrX,chrX	-,-,-,+	L1CAM,L1CAM,L1CAM,AVPR2	-4779,-4779,-4779,20702
chr19:55920736-55922301	chr19	+	55921100	55922339	True	NM_000991,NM_014501	chr19,chr19	+,-	RPL28,UBE2S	-23852,-1775
chr5:54317921-54319786	chr5	+	54318042	54319485	True	NM_002104,NM_007036	chr5,chr5	+,-	GZMK,ESM1	621,-36628
chr9:974474-974717	chr9	+	974482	974762	True	NM_021240,NM_152569	chr9,chr9	+,-	DMRT3,C9orf66	2201,-758589
chr16:2273121-2273432	chr16	+	2273123	2273355	True	NM_004424,NM_001042371	chr16,chr16	+,-	E4F1,PGP	211,-8301
chrX:18692005-18692644	chrX	+	18692151	18692624	True	NM_000330,NM_006240	chrX,chrX	-,+	RS1,PPEF1	-1928,16420
chr2:216944424-216946390	chr2	+	216945082	216946181	True	NM_018441,NM_138390,NM_001142312,NM_001142310,NM_001142311	chr2,chr2,chr2,chr2,chr2	-,+,+,+,+	PECR,TMEM169,TMEM169,TMEM169,TMEM169	408,407,407,407,407
chr17:46621091-46621295	chr17	+	46621113	46621295	True	NM_002145,NR_033201	chr17,chr17	-,+	HOXB2,LOC404266	1148,46527
chr2:239010176-239010518	chr2	+	239010217	239010451	True	NM_194312,NM_030768	chr2,chr2	+,-	ESPNL,ILKAP	-1317,101923
chr16:28076463-28077533	chr16	+	28076477	28077372	True	NM_001024401,NM_001109763	chr16,chr16	+,-	SBK1,GSG1L	226467,-1647
chr17:39577728-39578644	chr17	+	39577807	39578657	True	NM_030975,NM_003770	chr17,chr17	+,-	KRTAP9-9,KRT37	-166222,2215
chr17:15370829-15371518	chr17	+	15371042	15371504	True	NM_001204477,NM_001130842	chr17,chr17	-,+	CDRT4,ZNF286A	-117,231386
chr12:39973018-39973699	chr12	+	39973231	39973737	True	NM_001031748,NM_005164	chr12,chr12	+,-	C12orf40,ABCD2	46234,40156
chr16:30965206-30966326	chr16	+	30965475	30966345	True	NM_014712,NM_152288,NR_024348	chr16,chr16,chr16	+,+,-	SETD1A,ORAI3,FBXL19-AS1	2269,-5121,-30885
chrX:119443340-119443840	chrX	+	119443355	119443888	True	NM_001104545,NM_001104544,NM_001142447,NM_017938	chrX,chrX,chrX,chrX	-,-,+,-	FAM70A,FAM70A,ATP1B4,FAM70A	1553,1553,52051,1553
chr11:118826183-118827080	chr11	+	118826266	118826792	True	NM_006760,NM_182557	chr11,chr11	+,-	UPK2,BCL9L	215,-44653
chr12:53442917-53443573	chr12	+	53443107	53443379	True	NM_198316,NM_170754,NM_015319,NR_033854	chr12,chr12,chr12,chr12	+,+,+,-	TENC1,TENC1,TENC1,LOC283335	-2348,455,-425,4893
chr22:38599071-38599272	chr22	+	38599187	38599311	True	NM_001161573,NM_001161572,NM_001161574,NM_012323,NM_001199562	chr22,chr22,chr22,chr22,chr22	+,+,+,+,-	MAFF,MAFF,MAFF,MAFF,PLA2G6	-211,-1299,-1299,-1299,-21351
chr7:55712909-55713408	chr7	+	55712923	55713354	True	NM_182633,NR_027340	chr7,chr7	+,-	ZNF713,FKBP9L	266976,42422
chr14:61189188-61189422	chr14	+	61189192	61189350	True	NM_017420,NM_001177963	chr14,chr14	-,+	SIX4,MNAT1	1552,12108
chr12:7823204-7824348	chr12	+	7823418	7823826	True	NM_001644,NM_199286	chr12,chr12	-,+	APOBEC1,DPPA3	-4916,40262
chr7:27155370-27155714	chr7	+	27155438	27155672	True	NM_030661,NR_002795	chr7,chr7	-,+	HOXA3,HOXA11-AS1	3593,69354
chr8:35093283-35093531	chr8	+	35093452	35093560	True	NM_080872,NM_024025	chr8,chr8	+,-	UNC5D,DUSP26	-528,-1636013
chr10:35466520-35466768	chr10	+	35466570	35466786	True	NM_001198777,NM_182769,NM_182770	chr10,chr10,chr10	-,+,+	CUL2,CREM,CREM	-87000,-2105,-2105
chr14:94559152-94559671	chr14	+	94559220	94559491	True	NM_020414,NM_206949	chr14,chr14	-,+	DDX24,IFI27L1	-11662,-11632
chr1:57044837-57045109	chr1	+	57044855	57045107	True	NM_003713,NM_006252	chr1,chr1	-,+	PPAP2B,PRKAA2	200,65882
chr9:27282488-27283861	chr9	+	27282595	27283756	True	NR_026679,NR_026687,NM_000459	chr9,chr9,chr9	-,-,+	NCRNA00032,NCRNA00032,TEK	104,104,-173499
chr19:58252682-58254126	chr19	+	58253002	58253624	True	NM_173632,NM_024833	chr19,chr19	+,-	ZNF776,ZNF671	4539,-14007
chr21:34914430-34914650	chr21	+	34914490	34914624	True	NM_175085,NM_138927,NM_000819,NM_001136005,NM_032195,NM_001136006	chr21,chr21,chr21,chr21,chr21,chr21	-,+,-,-,+,-	GART,SON,GART,GART,SON,GART	-26,725,-26,621,725,624
chr22:16287186-16287857	chr22	+	16287234	16287888	True	NR_001591,NM_001136213	chr22,chr22	+,-	psiTPTE22,POTEH	794912,99
chr22:16287186-16287857	chr14	-	19553413	19553956	False	NM_001145442,NR_027480,NM_001005356	chr14,chr14,chr14	-,+,+	POTEM,POTEG,POTEG	466366,-99,-99
chr22:16287186-16287857	chr14	+	20019680	20020223	False	NM_001145442,NM_172194	chr14,chr14	-,+	POTEM,OR4Q3	99,195363
chr14:105782956-105783769	chr14	+	105783176	105783712	True	NM_001519,NM_015197,NM_001100913	chr14,chr14,chr14	-,+,+	BRF1,PACS2,PACS2	-15847,-2146,-2146
chr22:39151235-39151469	chr22	+	39151246	39151467	True	NM_015374,NM_001199580,NM_004286,NM_001199579	chr22,chr22,chr22,chr22	-,-,+,-	SUN2,SUN2,GTPBP1,SUN2	607,50,-49490,607
chr8:124406791-124408229	chr8	+	124406904	124408226	True	NM_018024,NM_014109	chr8,chr8	+,-	WDYHV1,ATAD2	20738,529
chr19:43768768-43769565	chr19	+	43769038	43769272	True	NR_026881,NM_002784	chr19,chr19	+,-	PRG1,PSG9	83935,4460
chr6:31802802-31803023	chr6_qbl_hap6	+	3096511	3096587	False	NM_001040437,NR_002745,NM_005527,NR_002742,NM_005346,NM_001040438	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,SNORD52,HSPA1B,C6orf48	-210,111,-20029,1921,-7399,-210
chr6:31802802-31803023	chr6_dbb_hap3	+	3088439	3088515	False	NM_001040437,NR_002745,NM_005527,NR_002742,NM_005346,NM_001040438	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,SNORD52,HSPA1B,C6orf48	-210,111,-20017,1923,-7391,-210
chr6:31802802-31803023	chr6	+	31802852	31802928	True	NM_001040437,NR_002745,NM_005527,NR_002742,NM_005346,NM_001040438	chr6,chr6,chr6,chr6,chr6,chr6	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,SNORD52,HSPA1B,C6orf48	-210,111,-20017,1924,-7391,-210
chr6:31802802-31803023	chr6_apd_hap1	+	3117606	3117682	False	NM_001040437,NR_002745,NM_005527,NR_002742,NM_005346,NM_001040438	chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,SNORD52,HSPA1B,C6orf48	-210,111,-20010,1925,-7381,-210
chr6:31802802-31803023	chr6_cox_hap2	+	3312428	3312504	False	NM_001040437,NR_002745,NM_005527,NR_002742,NM_005346,NM_001040438	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,SNORD52,HSPA1B,C6orf48	-210,111,-20013,1922,-7385,-210
chr7:143106096-143106296	chr7	+	143106095	143106247	True	NR_033897,NM_005232	chr7,chr7	+,-	LOC285965,EPHA1	-1240,-110
chr6:14690360-14691368	chr6	+	14690463	14691141	True	NM_001031713,NM_004973	chr6,chr6	-,+	CCDC90A,JARID2	-875674,555385
chr2:200820755-200821139	chr2	+	200820875	200821105	True	NM_001039693,NM_024520,NR_004862	chr2,chr2,chr2	-,+,-	C2orf60,C2orf47,C2orf60	-416,-886,-416
chr17:46185123-46185330	chr17	+	46185255	46185369	True	NM_001127228,NM_013323,NM_006807,NM_152244	chr17,chr17,chr17,chr17	-,+,-,+	CBX1,SNX11,CBX1,SNX11	-6372,-359,-6695,-386
chr12:81330336-81330716	chr12	+	81330369	81330719	True	NR_030349,NM_024560,NM_004664	chr12,chr12,chr12	-,+,-	MIR618,ACSS3,LIN7A	-757,141089,1025
chr15:72763077-72764466	chr15	+	72763452	72764266	True	NM_000520,NM_005744	chr15,chr15	-,+	HEXA,ARIH1	-94932,2400
chr2:219033439-219033754	chr2	+	219033472	219033774	True	NM_000634,NM_001557	chr2,chr2	-,+	CXCR1,CXCR2	-1756,-42788
chr17:39967271-39967527	chr17	+	39967438	39967498	True	NM_021939,NM_006455	chr17,chr17	+,-	FKBP10,LEPREL4	1463,1003
chr7:23232020-23232478	chr7	+	23232251	23232459	True	NM_032581,NM_007342	chr7,chr7	-,+	FAM126A,NUPL2	-178481,-10857
chr22:31476797-31477268	chr22	+	31476858	31477315	True	NM_134269,NM_006932,NM_134270,NM_080430	chr22,chr22,chr22,chr22	+,+,+,-	SMTN,SMTN,SMTN,SELM	-11,-11,-11,26286
chr14:64676730-64677839	chr14	+	64676875	64677637	True	NM_182910,NM_182913,NM_001040275	chr14,chr14,chr14	+,+,-	SYNE2,SYNE2,ESR2	5034,3221,83548
chr3:15901881-15902305	chr3	+	15901919	15902301	True	NM_015199,NR_030289	chr3,chr3	-,+	ANKRD28,MIR563	-866,12976
chr8:103428029-103428395	chr8	+	103428033	103428235	True	NM_024410,NM_015902	chr8,chr8	+,-	ODF1,UBR5	135612,-3116
chr3:192626499-192626764	chr3	+	192626512	192626698	True	NM_020386,NM_178496	chr3,chr3	+,-	HRASLS,MB21D2	332219,9302
chr1:53685372-53685859	chr1	+	53685397	53685894	True	NM_000098,NM_017887	chr1,chr1	+,-	CPT2,C1orf123	-23347,445
chr4:8452900-8453852	chr4	+	8452949	8453759	True	NM_152544,NM_003501	chr4,chr4	+,-	METTL19,ACOX3	-10472,-10497
chr2:176995068-176995269	chr2	+	176995091	176995225	True	NM_014213,NM_001080458,NM_001199747,NM_001199746,NM_019558	chr2,chr2,chr2,chr2,chr2	+,-,+,+,+	HOXD9,EVX2,HOXD8,HOXD8,HOXD8	-7729,-46401,-720,-674,-674
chr16:86597689-86597965	chr16	+	86597713	86597993	True	NM_001159380,NM_001159378,NM_001159379,NR_027490,NR_027489,NM_022764,NM_001159377,NM_005251,NR_026674	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	-,-,-,-,-,-,-,+,+	MTHFSD,MTHFSD,MTHFSD,MTHFSD,MTHFSD,MTHFSD,MTHFSD,FOXC2,FLJ30679	-8904,-8872,-8872,-8872,-8872,-8872,-8872,2863,-8839
chr2:88749803-88750975	chr2	+	88749986	88750918	True	NM_152670,NM_001135649	chr2,chr2	+,-	C2orf51,FOXI3	73250,1185
chr1:34632656-34633064	chr1	+	34632743	34633053	True	NM_052896,NM_032884,NM_001134734	chr1,chr1,chr1	-,+,+	CSMD2,C1orf94,C1orf94	-1300,-170,9499
chr4:103417961-103418362	chr4	+	103417998	103418289	True	NM_003998,NM_001165412,NM_001135146	chr4,chr4,chr4	+,+,-	NFKB1,NFKB1,SLC39A8	4196,4196,-151343
chr15:62930032-62930505	chr15	+	62930113	62930549	True	NM_015059,NR_026897	chr15,chr15	+,-	TLN2,MGC15885	8960,6881
chr7:140772025-140772443	chr7	+	140772061	140772421	True	NM_053035,NM_001195278	chr7,chr7	-,+	MRPS33,LOC100131199	-57280,1610
chr7:104632981-104634817	chr7	+	104633013	104634850	True	NR_024586,NM_018682	chr7,chr7	-,+	LOC100216545,MLL5	19797,19786
chr1:3714869-3715840	chr1	+	3715177	3715775	True	NM_020710,NM_001163724	chr1,chr1	-,+	LRRC47,LOC388588	-2109,-25876
chr6:44062724-44063449	chr6	+	44062729	44063061	True	NM_018426,NM_032111	chr6,chr6	+,-	TMEM63B,MRPL14	32314,32180
chr1:109505415-109505751	chr1	+	109505635	109505719	True	NM_013296,NM_015127,NM_001048210	chr1,chr1,chr1	+,-,-	GPSM2,CLCC1,CLCC1	-86091,442,442
chr7:6414673-6414932	chr7	+	6414692	6414869	True	NM_006908,NM_018890,NM_001037163	chr7,chr7,chr7	+,+,-	RAC1,RAC1,C7orf70	-617,-617,-26102
chrX:85403787-85404007	chrX	+	85403809	85403981	True	NM_053281,NM_001145414,NM_001139514	chrX,chrX,chrX	+,-,+	DACH2,CHM,DACH2	-405,-101243,-405
chr13:24465975-24466434	chr13	+	24466141	24466355	True	NM_001135816,NM_005932,NM_001014442,NM_001007537	chr13,chr13,chr13,chr13	+,-,+,-	PCOTH,MIPEP,PCOTH,C1QTNF9B	-2600,-2554,-3164,4828
chr13:24465975-24466434	chr13	-	24895114	24895192	False	NM_178540,NM_006437	chr13,chr13	+,-	C1QTNF9,PARP4	-11461,191806
chr16:90096017-90096323	chr16	+	90096046	90096208	True	NM_001214,NR_023348	chr16,chr16	-,+	C16orf3,GAS8	151,-7096
chr3:119189503-119190269	chr3	+	119189692	119190262	True	NM_018266,NM_152305,NR_024265	chr3,chr3,chr3	-,+,+	TMEM39A,POGLUT1,POGLUT1	-7221,-1958,-1958
chr5:54610366-54611737	chr5	+	54610448	54611542	True	NM_015360,NM_019030	chr5,chr5	+,-	SKIV2L2,DHX29	-6923,-6927
chr16:57653144-57653891	chr16	+	57653170	57653692	True	NM_001145771,NM_001145770,NM_001145773,NM_001145772,NM_033212,NM_201525,NM_201524,NM_005682	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,-,+,+,+	GPR56,GPR56,GPR56,GPR56,CCDC102A,GPR56,GPR56,GPR56	8726,217,8726,8726,-82693,8726,8726,217
chr8:38853982-38854267	chr8	+	38854074	38854248	True	NM_031940,NM_003816,NM_078473,NR_027638,NR_027639,NM_001024380,NM_001024381,NR_027878	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,+,-,+,+,-,-,+	TM2D2,ADAM9,TM2D2,ADAM9,ADAM9,TM2D2,TM2D2,ADAM9	-33,256,-33,256,256,-33,-33,256
chr5:140751193-140751801	chr5	+	140751198	140751656	True	NM_018924,NM_032086,NM_032097,NM_032054,NM_018918,NM_018919,NM_005642	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,-	PCDHGB3,PCDHGA6,PCDHGB3,PCDHGA5,PCDHGA5,PCDHGA6,TAF7	-1287,1994,-1287,-7351,-7351,1994,-50847
chr16:839153-839531	chr16	+	839213	839503	True	NM_001025190,NM_022092,NM_058192	chr16,chr16,chr16	-,+,-	MSLNL,CHTF18,RPUSD1	-6287,-642,-830
chr12:122659212-122660371	chr12	+	122659233	122660049	True	NM_001014336,NM_152759,NM_001098519	chr12,chr12,chr12	-,+,+	IL31,LRRC43,LRRC43	-487,-7018,7617
chr11:130786771-130787395	chr11	+	130786794	130787438	True	NM_001048209,NM_014758	chr11,chr11	+,-	NTM,SNX19	452932,-412
chr1:120191201-120191489	chr1	+	120191386	120191520	True	NM_006623,NM_001080470	chr1,chr1	+,-	PHGDH,ZNF697	62898,-996
chr18:9486137-9486381	chr18	+	9486136	9486202	True	NM_001042388,NM_006788	chr18,chr18	-,+	PPP4R1,RALBP1	128452,-10660
chr16:58549411-58549753	chr16	+	58549416	58549642	True	NM_001160305,NR_002978,NM_024860	chr16,chr16,chr16	+,-,+	SETD6,SNORA46,SETD6	-84,32945,-84
chr2:73475317-73475776	chr2	+	73475322	73475464	True	NM_032319,NR_029403	chr2,chr2	-,+	C2orf7,CCT7	-14966,-14010
chrX:9989893-9991582	chrX	+	9990033	9991535	True	NM_015691,NM_000273	chrX,chrX	+,-	WWC3,GPR143	-6290,-256028
chr2:27308767-27308991	chr2	+	27308962	27309028	True	NM_007046,NM_006488,NM_000221,NM_001134693	chr2,chr2,chr2,chr2	+,+,+,-	EMILIN1,KHK,KHK,OST4	-7578,582,582,-14395
chr4:8874237-8874534	chr4	+	8874254	8874574	True	NM_018942,NM_001040071	chr4,chr4	-,+	HMX1,LOC650293	-711,76902
chr15:33600041-33601075	chr15	+	33600086	33600960	True	NM_001036,NM_001103184	chr15,chr15	+,-	RYR3,FMN1	2216,-240001
chr2:97359079-97359709	chr2	+	97359247	97359585	True	NM_001142292,NM_001113382	chr2,chr2	-,+	LMAN2L,FER1L5	46278,-50724
chr6:3458283-3458604	chr6	+	3458317	3458605	True	NM_015482,NM_001128592	chr6,chr6	-,+	SLC22A23,PSMG4	-1524,-199216
chr15:65345475-65347296	chr15	+	65345717	65346635	True	NM_016563,NM_178859	chr15,chr15	-,+	RASL12,OSTBETA	13803,-8060
chr5:134073213-134073675	chr5	+	134073283	134073667	True	NM_001745,NM_016103	chr5,chr5	+,-	CAMLG,SAR1B	502,-104750
chr20:44538603-44539322	chr20	+	44538651	44539366	True	NM_001167594,NM_006227,NM_182676	chr20,chr20,chr20	+,-,-	CTSA,PLTP,PLTP	-19111,1470,1470
chr2:170415254-170415575	chr2	+	170415408	170415487	True	NM_004792,NM_024622	chr2,chr2	+,-	PPIG,FASTKD1	25362,14996
chr19:28282909-28284119	chr19	+	28282908	28284065	True	NR_027318,NR_027301	chr19,chr19	+,-	LOC148145,LOC148189	1171972,833
chr12:8087441-8087819	chr12	+	8087444	8087540	True	NM_006931,NM_018416	chr12,chr12	-,+	SLC2A3,FOXJ2	1410,97818
chr6:136172813-136173402	chr6	+	136173020	136173426	True	NM_001134832,NM_018945	chr6,chr6	-,+	AHI1,PDE7B	-354117,-244
chr2:111487701-111488116	chr2	+	111488050	111488156	True	NM_004336,NM_001142807	chr2,chr2	-,+	BUB1,ACOXL	-52366,1993
chr7:28993568-28995115	chr7	+	28993667	28994996	True	NM_014817,NM_004067	chr7,chr7	-,+	TRIL,CHN2	3083,239124
chr11:89698056-89698646	chr11	+	89698376	89698607	True	NR_028346,NM_001136486	chr11,chr11	-,+	TRIM53,TRIM64	37126,3064
chr11:89698056-89698646	chr11	-	89612259	89612490	False	NM_001164397,NR_028346	chr11,chr11	-,+	TRIM64B,TRIM53	-3074,-37152
chr15:32319930-32320164	chr15	+	32320001	32320217	True	NM_001190455,NM_000746,NM_130901	chr15,chr15,chr15	+,+,-	CHRNA7,CHRNA7,OTUD7A	2473,2473,-372459
chr20:35807842-35808114	chr20	+	35807902	35808114	True	NM_152503,NM_001135771,NM_213632,NM_002951,NM_213631	chr20,chr20,chr20,chr20,chr20	-,+,-,+,-	C20orf132,RPN2,C20orf132,RPN2,C20orf132	-54,-497,-54,-497,-54
chr17:8338109-8339001	chr17	+	8338613	8338977	True	NM_030808,NM_001146684,NM_001025579	chr17,chr17,chr17	+,-,+	NDEL1,RNF222,NDEL1	201,-37469,201
chr15:85172412-85173200	chr15	+	85172474	85173035	True	NM_032856,NR_004859,NR_003654	chr15,chr15,chr15	-,+,+	WDR73,SCAND2,SCAND2	24537,1655,1655
chr5:61696285-61697500	chr5	+	61696497	61696995	True	NM_014473,NM_016338	chr5,chr5	-,+	DIMT1L,IPO11	2783,11577
chr3:172424447-172425466	chr3	+	172424628	172425272	True	NM_001146278,NM_020792,NM_018098,NM_001146277,NM_001146276	chr3,chr3,chr3,chr3,chr3	-,-,+,-,-	NCEH1,NCEH1,ECT2,NCEH1,NCEH1	3797,3797,47025,3797,3797
chr3:161147244-161147892	chr3	+	161147362	161147733	True	NM_001080440,NM_001040100	chr3,chr3	+,-	OTOL1,C3orf57	66862,-57491
chr10:4868078-4868326	chr10	+	4868157	4868235	True	NM_001040177,NR_026743	chr10,chr10	+,-	AKR1E2,tAKR	166,90280
chr20:32033540-32034665	chr20	+	32033653	32034559	True	NM_003098,NM_001032999	chr20,chr20	-,+	SNTA1,CBFA2T2	-1955,43368
chrX:56270260-56271628	chrX	+	56270269	56271629	True	NM_001159296,NR_002308	chrX,chrX	+,-	KLF8,LOC442454	-11451,492438
chr1:111146188-111146513	chr1	+	111146193	111146543	True	NM_004974,NR_003599	chr1,chr1	-,+	KCNA2,CYMP	2482,-122857
chr11:72524709-72524948	chr11	+	72524745	72524947	True	NM_033388,NM_006645	chr11,chr11	+,-	ATG16L2,STARD10	503,-19995
chr4:146399294-146401259	chr4	+	146399374	146401075	True	NM_001003688,NM_005900,NM_001102653	chr4,chr4,chr4	+,+,-	SMAD1,SMAD1,OTUD4	2881,1875,-298542
chr3:58558525-58559244	chr3	+	58558599	58559147	True	NM_001076778,NM_007177,NM_153331	chr3,chr3,chr3	-,-,+	FAM107A,FAM107A,KCTD6	4394,4394,-74563
chr19:49116755-49117172	chr19	+	49116804	49117168	True	NM_001204159,NM_001204158,NM_000979,NM_017708,NM_133498,NM_020126	chr19,chr19,chr19,chr19,chr19,chr19	+,+,-,-,+,+	SPHK2,SPHK2,RPL18,FAM83E,SPACA4,SPHK2	5622,5379,5315,-110,-6855,5379
chr1:150848446-150848849	chr1	+	150848468	150848671	True	NM_001197325,NM_001145415,NM_001668,NM_178427	chr1,chr1,chr1,chr1	-,+,-,-	ARNT,SETDB1,ARNT,ARNT	623,50143,623,623
chr1:32475972-32476897	chr1	+	32475992	32476682	True	NM_080391,NM_006559	chr1,chr1	-,+	PTP4A2,KHDRBS1	-72004,2808
chr6:43476907-43477220	chr6	+	43477030	43477176	True	NM_004875,NM_001012974,NM_203290,NM_015388	chr6,chr6,chr6,chr6	+,-,+,-	POLR1C,C6orf154,POLR1C,YIPF3	7614,1298,7600,7602
chr12:49716260-49716594	chr12	+	49716580	49716642	True	NM_001100620,NM_001008223,NM_005480	chr12,chr12,chr12	+,-,+	TROAP,C1QL4,TROAP	328,14379,328
chr5:172570797-172571439	chr5	+	172570801	172571449	True	NM_001166175,NM_001205,NM_013980,NM_013979,NM_013978	chr5,chr5,chr5,chr5,chr5	-,+,+,+,+	NKX2-5,BNIP1,BNIP1,BNIP1,BNIP1	90916,-5,-5,-5,-5
chr9:13985028-13986439	chr9	+	13986028	13986472	True	NR_003920,NM_001190737	chr9,chr9	+,-	LOC389705,NFIB	1006852,327623
chr2:6645370-6646527	chr2	+	6645532	6646496	True	NM_207315,NM_080657	chr2,chr2	-,+	CMPK2,RSAD2	359490,371299
chr3:136583255-136583690	chr3	+	136583352	136583595	True	NM_006153,NM_005862	chr3,chr3	+,-	NCK1,STAG1	-2356,-112107
chr12:5416420-5417164	chr12	+	5416528	5417194	True	NM_020373,NM_001102654	chr12,chr12	-,+	ANO2,NTF3	638254,124085
chr7:111206213-111206909	chr7	+	111206234	111206924	True	NM_032549,NM_018334	chr7,chr7	-,+	IMMP2L,LRRN3	-3887,-475223
chr10:126139511-126140631	chr10	+	126139525	126140329	True	NM_001146340,NM_001167880	chr10,chr10	-,+	NKX1-2,LHPP	-975,10011
chr10:733962-734382	chr10	+	733984	734420	True	NR_027152,NM_014974	chr10,chr10	+,-	C10orf108,DIP2C	-38018,1238
chr5:37835451-37836265	chr5	+	37835517	37836260	True	NM_152403,NM_000514,NM_001190469,NM_001190468,NM_199231	chr5,chr5,chr5,chr5,chr5	+,-,-,-,-	EGFLAM,GDNF,GDNF,GDNF,GDNF	422272,3572,164,164,-64
chr3:42641764-42642161	chr3	+	42641774	42641960	True	NM_001201572,NM_016305,NM_005385	chr3,chr3,chr3	-,+,+	SEC22C,SS18L2,NKTR	662,-9529,186
chr11:118926260-118926919	chr11	+	118926353	118926949	True	NM_021729,NM_006389,NM_001130991	chr11,chr11,chr11	+,-,-	VPS11,HYOU1,HYOU1	11543,1017,1026
chr6:35887684-35887929	chr6	+	35887698	35887926	True	NR_034069,NM_139013,NM_003137	chr6,chr6,chr6	-,+,-	SRPK1,MAPK14,SRPK1	1081,107527,1081
chr8:101323868-101324386	chr8	+	101324030	101324310	True	NM_183419,NM_003114,NM_015435	chr8,chr8,chr8	-,+,-	RNF19A,SPAG1,RNF19A	-1703,-153525,-8543
chr19:14230566-14231238	chr19	+	14230628	14231104	True	NR_024282,NM_207518,NM_002730	chr19,chr19,chr19	+,-,-	LOC113230,PRKACA,PRKACA	-46858,-5636,-2069
chr6:116892015-116892261	chr6	+	116892043	116892275	True	NM_001007464,NM_016104,NM_001139444,NM_015952	chr6,chr6,chr6,chr6	+,+,-,+	RWDD1,RWDD1,BET3L,RWDD1	307,307,-25270,307
chr2:158977978-158978500	chr2	+	158977980	158978477	True	NM_001111067,NM_173355	chr2,chr2	-,+	ACVR1,UPP2	-245606,-19649
chr4:113557913-113558181	chr4	+	113557955	113558160	True	NM_018392,NM_015454,NM_016648	chr4,chr4,chr4	-,+,+	C4orf21,LARP7,LARP7	41,451,40
chr9:124989853-124990477	chr9	+	124989853	124990465	True	NM_199160,NM_001173512,NM_014368	chr9,chr9,chr9	-,+,-	LHX6,MRRF,LHX6	604,36416,604
chr1:28919524-28919874	chr1	+	28919583	28919707	True	NM_152304,NR_024127,NM_001193532	chr1,chr1,chr1	+,-,+	RAB42,SNHG12,RAB42	-922,-11217,-627
chr2:99953030-99953260	chr2	+	99953036	99953277	True	NM_015904,NM_005783	chr2,chr2	+,-	EIF5B,TXNDC9	556,-176
chr12:133198358-133198587	chr12	+	133198473	133198597	True	NM_174872,NM_174873,NM_170683,NM_170682,NM_012226,NM_016318,NM_001195520	chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,+,+,+,+,-	P2RX2,P2RX2,P2RX2,P2RX2,P2RX2,P2RX2,LOC645277	-3121,-3121,-3121,-3121,-3121,-3121,-11436
chr18:9709647-9710569	chr18	+	9709821	9710489	True	NM_006868,NM_005134	chr18,chr18	+,-	RAB31,PPP4R1	-1644,-95221
chr17:48640290-48641347	chr17	+	48640654	48641254	True	NM_198377,NM_198376,NM_001267,NM_198396,NM_198384,NM_198379,NM_198378,NM_198386,NM_198387,NM_198397,NM_198385,NM_198382,NM_198383,NM_198380,NM_018896,NM_198388	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,-,+,+,+,+,+,+,+,+,+,+,+,+,+	CACNA1G,CACNA1G,CHAD,CACNA1G,CACNA1G,CACNA1G,CACNA1G,CACNA1G,CACNA1G,CACNA1G,CACNA1G,CACNA1G,CACNA1G,CACNA1G,CACNA1G,CACNA1G	-2256,-2256,-94427,-2256,-2256,-2256,-2256,-2256,-2256,-2256,-2256,-2256,-2256,-2256,-2256,-2256
chr6:14814760-14815735	chr6	+	14815126	14815704	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	430822,847636
chr16:29827301-29827537	chr16	+	29827322	29827514	True	NM_017458,NM_024516,NM_005115,NM_006319,NM_145239,NM_001042539,NM_002383	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,-,+,+,+	MVP,C16orf53,MVP,CDIPT,PRRT2,MAZ,MAZ	4200,13,4200,47114,-3964,-9518,-9518
chr7:150865500-150866011	chr7	+	150865567	150866027	True	NM_001098834,NM_019015	chr7,chr7	-,+	GBX1,CHPF2	-700,63557
chrX:53258361-53260169	chrX	+	53258546	53259986	True	NM_004187,NM_022117,NM_001146702	chrX,chrX,chrX	-,+,-	KDM5C,TSPYL2,KDM5C	-3942,-147055,-3942
chrY:9230811-9232445	chrY	+	9231950	9232025	True	NR_001553,NM_001077697,NM_001164471	chrY,chrY,chrY	-,+,+	FAM197Y2P,TSPY3,TSPY4	-18879,4004,4050
chr7:45613285-45613535	chr7	+	45613297	45613469	True	NM_021116,NR_024271	chr7,chr7	+,-	ADCY1,SEPT7P2	655,195198
chr21:31316353-31318247	chr21	+	31316490	31318204	True	NM_175611,NR_027021,NM_000830	chr21,chr21,chr21	-,+,-	GRIK1,GRIK1-AS1,GRIK1	-4208,-196047,-4208
chr9:86432925-86433387	chr9	+	86433069	86433427	True	NM_025211,NM_001135953,NM_024945	chr9,chr9,chr9	-,-,+	GKAP1,GKAP1,RMI1	-317,-317,162209
chr9:86432925-86433387	chr9	-	88419608	88419785	False	NR_029410,NM_015239	chr9,chr9	+,-	LOC389765,AGTPBP1	1131,-62664
chr13:47128100-47128475	chr13	+	47128167	47128515	True	NM_001164213,NM_001164211,NM_025113,NM_015116	chr13,chr13,chr13,chr13	+,+,-,+	LRCH1,LRCH1,C13orf18,LRCH1	-922,-922,-166532,-922
chr7:31088425-31088883	chr7	+	31088431	31088873	True	NM_022728,NM_001199635,NM_001199637,NM_001118,NM_001199636	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	NEUROD6,ADCYAP1R1,ADCYAP1R1,ADCYAP1R1,ADCYAP1R1	291719,3202,3202,3202,3202
chr15:27110027-27111909	chr15	+	27110229	27111787	True	NM_001165037,NM_000810,NM_021912	chr15,chr15,chr15	+,+,-	GABRA5,GABRA5,GABRB3	485,78,-91294
chr9:95189853-95190596	chr9	+	95190250	95190616	True	NM_005014,NM_001012267	chr9,chr9	-,+	OMD,CENPP	-3414,-102560
chr3:52100858-52101299	chr3	+	52100902	52101236	True	NM_001198898,NR_027331	chr3,chr3	+,-	ACY1,C3orf74	-83653,-1774
chr4:166152942-166153433	chr4	+	166153084	166153340	True	NM_001161522,NR_026575	chr4,chr4	+,-	KLHL2,GK3P	-21968,47891
chr4:166152942-166153433	chr4	+	120268442	120268704	False	NM_000134,NR_037630	chr4,chr4	-,+	FABP2,LOC645513	-25126,107233
chr6:34361478-34362333	chr6	+	34361585	34362294	True	NM_006703,NM_020804	chr6,chr6	-,+	NUDT3,PACSIN1	-1128,71558
chr22:42474434-42474748	chr22	+	42474466	42474688	True	NM_033318,NM_001002034,NM_000262	chr22,chr22,chr22	+,+,-	C22orf32,FAM109B,NAGA	1010,-4262,-7620
chr19:17504288-17504630	chr19	+	17504443	17504617	True	NM_004335,NM_138401	chr19,chr19	-,+	BST2,FAM125A	11817,26294
chr14:31849459-31850308	chr14	+	31849631	31850184	True	NM_025152,NM_015473	chr14,chr14	+,-	NUBPL,HEATR5A	180406,39660
chr12:103984755-103985711	chr12	+	103984792	103985616	True	NM_017564,NM_001099336	chr12,chr12	+,-	STAB2,C12orf42	-3781,-95043
chr6:26100332-26101147	chr6	+	26100332	26100651	True	NM_003542,NM_005323	chr6,chr6	+,-	HIST1H4C,HIST1H1T	3524,7770
chr8:145751127-145751460	chr8	+	145751196	145751416	True	NM_001001795,NM_001024678,NM_014665,NM_004260	chr8,chr8,chr8,chr8	-,-,+,-	C8orf82,LRRC24,LRRC14,RECQL4	3092,1050,-7884,-7986
chr17:47207922-47208931	chr17	+	47208183	47208789	True	NM_001159388,NM_031498,NM_153446,NM_001159387	chr17,chr17,chr17,chr17	+,-,+,+	B4GALNT2,GNGT2,B4GALNT2,B4GALNT2	1032,78004,1539,1341
chr11:72851988-72852200	chr11	+	72852003	72852237	True	NM_014824,NM_002564	chr11,chr11	-,+	FCHSD2,P2RY2	956,77106
chr11:57790769-57791738	chr11	+	57790881	57791627	True	NM_001005211,NM_001005212,NM_001005186	chr11,chr11,chr11	-,+,+	OR9I1,OR9Q1,OR6Q1	95339,1,6797
chr16:64232917-64234020	chr16	+	64233124	64234029	True	NM_001795,NM_001797	chr16,chr16	+,-	CDH5,CDH11	2166495,921940
chr5:115910872-115911098	chr5	+	115910915	115911118	True	NM_020796,NM_016144	chr5,chr5	-,+	SEMA6A,COMMD10	-364,-490244
chr7:143581612-143582257	chr7	+	143581615	143582085	True	NM_014719,NM_001004685	chr7,chr7	-,+	FAM115A,OR2F2	17138,50240
chr1:160331726-160332638	chr1	+	160331801	160332584	True	NM_004371,NM_005598	chr1,chr1	-,+	COPA,NHLH1	-18447,4276
chr6:14941953-14942505	chr6	+	14942141	14942504	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	304022,720836
chr4:76649609-76649842	chr4	+	76649614	76649886	True	NM_203505,NM_003715	chr4,chr4	-,+	G3BP2,USO1	-50947,-26
chr8:144513946-144514546	chr8	+	144513950	144514503	True	NM_201589,NM_052924	chr8,chr8	-,+	MAFA,RHPN1	-1348,-62976
chrX:112083871-112084115	chrX	+	112083911	112083973	True	NM_133265,NM_001004308	chrX,chrX	-,+	AMOT,ZCCHC16	120,-757709
chr6:71137158-71139070	chr6	+	71137368	71138915	True	NM_001851,NM_001162529	chr6,chr6	-,+	COL9A1,FAM135A	-124582,-1288
chr6:17601337-17602420	chr6	+	17601446	17602235	True	NM_005124,NM_016255	chr6,chr6	-,+	NUP153,FAM8A1	104640,-980
chr11:62521091-62521389	chr11	+	62521229	62521317	True	NM_002696,NM_024784	chr11,chr11	+,-	POLR2G,ZBTB3	7693,389
chr3:130545614-130546015	chr3	+	130545658	130545895	True	NM_014602,NM_001199181	chr3,chr3	-,+	PIK3R4,ATP2C1	-79962,23473
chr15:74724684-74725029	chr15	+	74724886	74725024	True	NM_001146029,NM_006465,NM_001146030,NM_003612	chr15,chr15,chr15,chr15	-,+,-,-	SEMA7A,ARID3B,SEMA7A,SEMA7A	1325,108523,1027,1325
chr9:125239143-125240145	chr9	+	125239273	125239961	True	NM_054107,NM_001004451	chr9,chr9	+,-	OR1J2,OR1J1	33119,294
chr4:3250293-3250633	chr4	+	3250303	3250582	True	NM_001042690,NM_002337	chr4,chr4	+,-	C4orf44,LRPAP1	184,283692
chr4:53728813-53729045	chr4	+	53728829	53729093	True	NM_022832,NM_023940	chr4,chr4	-,+	USP46,RASL11B	-203327,-385
chr11:8009463-8009796	chr11	+	8009463	8009835	True	NM_003754,NM_176821	chr11,chr11	+,-	EIF3F,NLRP10	-655,-24404
chr16:18572642-18573109	chr16	+	18572641	18572923	True	NM_001004060,NM_173614,NR_003569	chr16,chr16,chr16	-,-,+	NOMO2,NOMO2,ABCC6P1	561,561,9646
chr16:18572642-18573109	chr16	-	16326962	16327012	False	NM_001171,NM_001079528,NM_001004067	chr16,chr16,chr16	-,-,+	ABCC6,ABCC6,NOMO3	-9634,-9634,-624
chr16:18572642-18573109	chr16	-	14928147	14928419	False	NR_023387,NM_014287	chr16,chr16	-,+	ABCC6P2,NOMO1	-9588,-555
chr12:52461673-52462103	chr12	+	52461673	52461836	True	NM_001098673,NM_021934,NM_001081492	chr12,chr12,chr12	+,+,-	C12orf44,C12orf44,KRT80	1921,1921,124003
chr1:156265247-156266038	chr1	+	156265416	156265896	True	NM_144580,NM_032323,NM_001004319	chr1,chr1,chr1	-,+,-	C1orf85,TMEM79,VHLL	-29,-11397,3582
chrX:153848226-153848461	chrX	+	153848341	153848403	True	NM_139250,NM_001327	chrX,chrX	-,-	CTAG1A,CTAG1B	-819,-819
chrX:153848226-153848461	chrX	-	153812536	153812598	False	NM_139250,NM_001327	chrX,chrX	+,+	CTAG1A,CTAG1B	819,819
chr6:110733691-110734519	chr6	+	110733757	110734559	True	NM_004032,NM_003649,NM_015891	chr6,chr6,chr6	-,-,+	DDO,DDO,CDC40	2244,2244,-232184
chr1:46112522-46112888	chr1	+	46112522	46112748	True	NM_016486,NR_026768	chr1,chr1	+,-	TMEM69,RPS15AP10	41098,-165
chr18:61559613-61559821	chr18	+	61559613	61559869	True	NM_002575,NM_001143818,NM_006919	chr18,chr18,chr18	+,+,-	SERPINB2,SERPINB2,SERPINB3	-4736,-4736,-230416
chr3:50386832-50387778	chr3	+	50386843	50387827	True	NM_015896,NM_007022,NM_007024,NM_006545,NM_007182,NM_170714	chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-	ZMYND10,CYB561D2,TMEM115,NPRL2,RASSF1,RASSF1	-3687,469,9162,709,-8476,-8476
chr5:178368655-178369193	chr5	+	178368855	178369141	True	NM_182594,NM_000843,NM_001178090,NM_001178089	chr5,chr5,chr5,chr5	+,-,+,+	ZNF454,GRM6,ZNF454,ZNF454	-712,53033,-712,-712
chrX:11282016-11282869	chrX	+	11282151	11282901	True	NM_001142,NM_013423	chrX,chrX	+,-	AMELX,ARHGAP6	28631,1246
chr22:50494472-50494681	chr22	+	50494548	50494702	True	NM_139202,NM_001164104	chr22,chr22	-,+	MLC1,MOV10L1	29129,33732
chr12:31812203-31812802	chr12	+	31812354	31812744	True	NM_144973,NM_173802,NM_001135863	chr12,chr12,chr12	-,+,+	DENND5B,METTL20,METTL20	-68402,-284,12
chr12:127571401-127573066	chr12	+	127571509	127573059	True	NR_033970,NR_015398	chr12,chr12	-,+	LOC440117,LOC100128554	-212273,-644533
chr18:44140469-44140671	chr18	+	44140468	44140626	True	NM_152470,NM_001145472	chr18,chr18	+,-	RNF165,LOXHD1	-226332,-1198
chr6:34521729-34521965	chr6	+	34521786	34522014	True	NM_001199583,NM_012391	chr6,chr6	+,-	PACSIN1,SPDEF	-39188,2127
chr19:56701379-56701662	chr19	+	56701403	56701633	True	NM_033106,NM_001080456	chr19,chr19	+,-	GALP,ZSCAN5B	-14065,2838
chr3:154040978-154042041	chr3	+	154041290	154042050	True	NM_015595,NM_020865,NM_001114397	chr3,chr3,chr3	+,-,-	ARHGEF26,DHX36,DHX36	-202199,286,286
chr11:63664108-63665492	chr11	+	63664157	63665377	True	NM_017490,NM_173587	chr11,chr11	+,-	MARK2,RCOR2	-8221,18989
chr20:42876599-42877834	chr20	+	42877184	42877676	True	NM_024034,NM_016470	chr20,chr20	+,-	GDAP1L1,C20orf111	-1327,-37753
chr7:100466338-100466660	chr7	+	100466384	100466568	True	NM_001015072,NM_003302,NM_001128853,NM_001128852,NM_015908,NM_001128854	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,+,+	UFSP1,TRIP6,SRRT,SRRT,SRRT,SRRT	20821,-1485,6132,6132,6132,6132
chr6:26239242-26239648	chr6	+	26239312	26239616	True	NM_003547,NM_005320,NM_003540	chr6,chr6,chr6	-,-,+	HIST1H4G,HIST1H1D,HIST1H4F	7651,-4096,1037
chr16:67876584-67876964	chr16	+	67876622	67876998	True	NM_025082,NM_020457,NM_005796	chr16,chr16,chr16	-,+,+	CENPT,THAP11,NUTF2	4413,-460,3820
chr4:15003583-15003858	chr4	+	15003699	15003849	True	NM_001177384,NM_001177381,NM_001177383,NM_001177382,NM_182646,NM_001193534,NM_182485	chr4,chr4,chr4,chr4,chr4,chr4,chr4	+,+,+,+,+,-,+	CPEB2,CPEB2,CPEB2,CPEB2,CPEB2,FBXL5,CPEB2	448,448,448,448,448,653236,448
chr11:110560461-110561721	chr11	+	110560710	110561700	True	NM_020809,NM_004109	chr11,chr11	-,+	ARHGAP20,FDX1	21813,-260178
chr3:73042775-73043494	chr3	+	73042860	73043086	True	NM_174907,NM_018130	chr3,chr3	+,-	PPP4R2,SHQ1	3032,-145262
chr15:77218799-77219413	chr15	+	77218821	77219376	True	NM_020843,NM_002902	chr15,chr15	-,+	SCAPER,RCN2	-42604,4585
chr9:139268896-139269153	chr9	+	139268956	139269066	True	NM_052813,NM_001200003,NM_052814	chr9,chr9,chr9	-,+,-	CARD9,GPSM1,CARD9	-823,-19755,-823
chr19:10361597-10362460	chr19	+	10361972	10362508	True	NM_015956,NM_146387,NM_004230,NM_146388	chr19,chr19,chr19,chr19	+,+,-,+	MRPL4,MRPL4,S1PR2,MRPL4	131,131,-20024,131
chr7:100136447-100136677	chr7	+	100136447	100136597	True	NM_006076,NM_001168682	chr7,chr7	+,-	AGFG2,SAP25	236,34723
chr16:59741690-59742834	chr16	+	59741690	59742868	True	NR_028471,NM_024860	chr16,chr16	-,+	LOC644649,SETD6	46277,-1192365
chr20:2487832-2488522	chr20	+	2488039	2488564	True	NM_024325,NM_080751	chr20,chr20	-,+	ZNF343,TMC2	1264,28688
chr12:52719979-52721639	chr12	+	52720166	52721618	True	NM_002284,NM_002282	chr12,chr12	+,-	KRT86,KRT83	-24575,-4984
chr5:77574345-77575452	chr5	+	77574627	77575438	True	NM_003664,NM_004866	chr5,chr5	-,+	AP3B1,SCAMP1	15152,80900
chr13:33161400-33161611	chr13	+	33161441	33161592	True	NM_033111,NM_015032	chr13,chr13	-,+	N4BP2L2,PDS5B	-48505,-928
chr2:56413135-56414551	chr2	+	56413260	56414517	True	NM_001080433,NR_030623	chr2,chr2	+,-	CCDC85A,MIR216B	-2053,-185330
chr6:25966071-25967175	chr6	+	25966301	25967205	True	NM_006355,NM_005835	chr6,chr6	+,-	TRIM38,SLC17A2	-3288,-35355
chr9:117373217-117373544	chr9	+	117373383	117373553	True	NM_153045,NM_001199233	chr9,chr9	+,-	C9orf91,LOC100505478	152,70866
chr19:39278243-39279114	chr19	+	39278668	39279023	True	NM_002307,NM_001042507	chr19,chr19	-,+	LGALS7,LGALS7B	-14511,826
chr9:69147782-69148032	chr9	+	69147851	69148021	True	NR_002836,NM_001098805	chr9,chr9	-,+	PGM5P2,ANKRD20A4	3,233959
chr9:69147782-69148032	chr9	+	68809903	68810073	False	NR_002836,NR_034006	chr9,chr9	-,+	PGM5P2,LOC100132352	337831,-83413
chr17:34199084-34199512	chr17	+	34199230	34199470	True	NM_152781,NM_003487,NM_002985	chr17,chr17,chr17	-,+,-	C17orf66,TAF15,CCL5	-3335,-62793,7957
chr11:75914465-75914872	chr11	+	75914603	75914865	True	NM_004626,NM_020193	chr11,chr11	-,+	WNT11,C11orf30	2759,241203
chr7:101004525-101004755	chr7	+	101004530	101004744	True	NM_022777,NM_133457	chr7,chr7	-,+	RABL5,EMID2	-39437,1377
chr2:159651806-159652120	chr2	+	159651865	159652124	True	NM_001171637,NM_001017920	chr2,chr2	-,+	CCDC148,DAPL1	-338600,-87
chr14:64682671-64683276	chr14	+	64682735	64683325	True	NM_182910,NM_182913,NM_001040275	chr14,chr14,chr14	+,+,-	SYNE2,SYNE2,ESR2	-114,-1927,77853
chr7:156444640-156445160	chr7	+	156444701	156445180	True	NR_026865,NM_001184997	chr7,chr7	-,+	C7orf13,RNF32	-11353,-9081
chr9:77567499-77567706	chr9	+	77567534	77567754	True	NM_012383,NM_017998	chr9,chr9	+,-	OSTF1,C9orf40	135643,98
chr19:50920817-50921098	chr19	+	50920847	50920925	True	NM_003121,NM_004851	chr19,chr19	+,-	SPIB,NAPSA	1269,-51916
chr8:39771111-39772579	chr8	+	39771141	39772631	True	NM_001464,NM_002164	chr8,chr8	-,+	ADAM2,IDO1	-75362,124
chr3:133118112-133119087	chr3	+	133118149	133118717	True	NM_003571,NM_007027	chr3,chr3	+,-	BFSP2,TOPBP1	72,262070
chr19:42377842-42378907	chr19	+	42378559	42378645	True	NM_198977,NM_001783,NM_021601,NM_004706,NM_199002,NM_173506	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,-	ARHGEF1,CD79A,CD79A,ARHGEF1,ARHGEF1,LYPD4	8621,2544,2544,8621,9800,-30051
chr19:51868063-51869342	chr19	+	51868121	51869266	True	NM_001985,NM_152353,NR_033235,NM_005601	chr19,chr19,chr19,chr19	-,-,+,-	ETFB,CLDND2,LOC100129083,NKG7	456,3041,49893,6744
chr21:45683511-45684108	chr21	+	45683550	45683867	True	NM_000383,NM_175867,NM_013369	chr21,chr21,chr21	+,-,-	AIRE,DNMT3L,DNMT3L	21895,-1451,-1451
chr3:138957165-138957712	chr3	+	138957319	138957697	True	NR_027070,NM_020191	chr3,chr3	-,+	PISRT1,MRPS22	-4955,105163
chr8:22524546-22525238	chr8	+	22524666	22525161	True	NM_018688,NM_021174	chr8,chr8	-,+	BIN3,KIAA1967	1551,-62185
chr15:93346462-93347046	chr15	+	93346618	93347093	True	NR_033769,NM_207446	chr15,chr15	+,-	ASB9P1,FAM174B	-7960,-147587
chr1:6238758-6238965	chr1	+	6238764	6238926	True	NM_207396,NM_015557	chr1,chr1	+,-	RNF207,CHD5	27262,1318
chr20:4794397-4794946	chr20	+	4794501	4794817	True	NM_012409,NM_170774,NM_014737	chr20,chr20,chr20	+,-,-	PRND,RASSF2,RASSF2	-92003,1002,9524
chr10:70585814-70586202	chr10	+	70585979	70586161	True	NM_152709,NM_001130159,NM_001130161,NM_001130162,NM_152707,NM_001130160	chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,-,+	STOX1,STOX1,STOX1,STOX1,SLC25A16,STOX1	1132,1132,1132,1401,-298699,1132
chr16:29798882-29799874	chr16	+	29799019	29799417	True	NM_175900,NM_007317,NM_152338	chr16,chr16,chr16	-,+,+	C16orf54,KIF22,ZG16	-41679,2640,-9509
chr13:53229334-53229657	chr13	+	53229463	53229697	True	NM_006704,NM_001011705,NM_001130912	chr13,chr13,chr13	+,-,+	SUGT1,LECT1,SUGT1	-2683,84300,-2683
chr3:50351328-50352608	chr3	+	50351329	50352625	True	NM_153215,NM_007022,NM_153281,NM_033158,NM_003773	chr3,chr3,chr3,chr3,chr3	+,+,-,-,-	C3orf45,CYB561D2,HYAL1,HYAL2,HYAL2	-34863,35671,-1517,7706,7706
chr11:86342933-86344765	chr11	+	86343192	86344640	True	NM_001014811,NM_007173	chr11,chr11	-,+	ME3,PRSS23	38650,166850
chr16:29372211-29373070	chr16	+	29372423	29373069	True	NR_002939,NM_001031827	chr16,chr16	+,-	RUNDC2C,BOLA2	-69940,93266
chr16:29372211-29373070	chr16	+	21393303	21393949	False	NR_026675,NM_130464	chr16,chr16	+,-	NCRNA00169,NPIPL3	-81191,42759
chr13:45565079-45566316	chr13	+	45565615	45566244	True	NM_012345,NM_018559	chr13,chr13	-,+	NUFIP1,KIAA1704	-2002,-1991
chr3:26664938-26665524	chr3	+	26665053	26665559	True	NM_052953,NM_199347	chr3,chr3	+,-	LRRC3B,NEK10	-804,745403
chr16:27561735-27562196	chr16	+	27561789	27562222	True	NM_015202,NM_001520	chr16,chr16	+,-	KIAA0556,GTF3C1	-372,-538
chrX:129402951-129404044	chrX	+,-	129402955	129403959	True	NM_017666,NM_003951	chrX,chrX	-,+	ZNF280C,SLC25A14	-33,70087
chr18:51795937-51796409	chr18	+	51796234	51796404	True	NM_007195,NM_015832	chr18,chr18	+,-	POLI,MBD2	-436,-45076
chr3:195310053-195310626	chr3	+	195310052	195310665	True	NM_001647,NR_003265	chr3,chr3	-,+	APOD,SDHAP2	462,74244
chr16:14172551-14172846	chr16	+	14172719	14172891	True	NM_014048,NM_001134477	chr16,chr16	+,-	MKL2,PARN	-7585,551279
chr21:33758180-33759650	chr21	+	33758534	33759482	True	NR_002996,NM_014825,NR_026845	chr21,chr21,chr21	-,-,+	SNORA80,URB1,C21orf119	-8903,5880,5959
chr2:85830595-85830874	chr2	+	85830602	85830698	True	NR_033179,NM_016494,NM_001013649,NM_001031738	chr2,chr2,chr2,chr2	-,+,-,-	TMEM150A,RNF181,C2orf68,TMEM150A	-780,-7821,8539,-780
chr6:15933336-15934152	chr6	+	15933664	15934200	True	NM_013262,NR_036448	chr6,chr6	+,-	MYLIP,DTNBP1	195116,-270375
chr12:322130-322512	chr12	+	322143	322501	True	NM_001122848,NM_015232,NM_003044,NM_001122847	chr12,chr12,chr12,chr12	-,+,-,-	SLC6A12,IQSEC3,SLC6A12,SLC6A12	920,-135659,41,383
chr6:53210880-53212734	chr6	+	53211226	53212681	True	NM_012347,NM_021814	chr6,chr6	+,-	FBXO9,ELOVL5	-275513,1311
chr22:23868312-23868657	chr22	+	23868463	23868705	True	NM_153615,NM_020070	chr22,chr22	+,-	RGL4,IGLL1	164342,53840
chr1:78442470-78442911	chr1	+	78442488	78442882	True	NM_007034,NM_003902	chr1,chr1	+,-	DNAJB4,FUBP1	27753,1959
chr14:88733568-88733805	chr14	+	88733567	88733700	True	NM_001040428,NM_138318	chr14,chr14	+,-	SPATA7,KCNK10	118287,3618
chr5:10562918-10563192	chr5	+	10562992	10563086	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	1348,198351
chr13:22244588-22244954	chr13	+	22244715	22244987	True	NM_152726,NM_002010	chr13,chr13	-,+	EFHA1,FGF9	-66360,227
chr6:39670867-39672734	chr6	+	39670903	39672750	True	NM_145027,NM_001201427	chr6,chr6	-,+	KIF6,DAAM2	20481,87408
chr1:156341815-156342741	chr1	+	156341875	156342787	True	NR_036565,NM_020407,NR_026549	chr1,chr1,chr1	-,+,+	CCT3,RHBG,RHBG	-33669,-2923,-2923
chr8:27850126-27850770	chr8	+	27850149	27850773	True	NM_173833,NM_018091	chr8,chr8	-,+	SCARA5,ELP3	-26,99810
chr11:19371705-19372280	chr11	+	19371788	19372256	True	NM_001111018,NM_024680	chr11,chr11	+,-	NAV2,E2F8	14,-109281
chr2:31361072-31361352	chr2	+	31361089	31361347	True	NM_014600,NM_024572	chr2,chr2	+,-	EHD3,GALNT14	95532,274
chr2:234762279-234762528	chr2	+	234762286	234762528	True	NM_018410,NM_024080	chr2,chr2	-,+	HJURP,TRPM8	734,63514
chr1:156826786-156828440	chr1	+	156826889	156828122	True	NM_001012331,NM_002529,NM_014215	chr1,chr1,chr1	+,+,-	NTRK1,NTRK1,INSRR	2548,2548,642
chr15:57208952-57209353	chr15	+	57209006	57209340	True	NM_003205,NM_207038,NM_207037,NR_015419,NM_207036	chr15,chr15,chr15,chr15,chr15	+,+,+,-,+	TCF12,TCF12,TCF12,LOC145783,TCF12	1492,1492,1492,1407,1492
chr6:28499389-28500821	chr6	+	28499394	28500449	True	NM_001509,NM_182701,NM_003996	chr6,chr6,chr6	+,-,+	GPX5,GPX6,GPX5	-5656,-15824,-5656
chr6:28499389-28500821	chr6_cox_hap2	+	21598	22653	False	NM_001509,NM_052923,NM_003996	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,-,+	GPX5,SCAND3,GPX5	-5656,54714,-5656
chr16:15980622-15980911	chr16	+	15980656	15980738	True	NM_144600,NM_004996	chr16,chr16	-,+	FOPNL,ABCC1	1763,62695
chr2:44063373-44064034	chr2	+	44063383	44063949	True	NM_022436,NM_022437	chr2,chr2	-,+	ABCG5,ABCG8	2059,2153
chr3:123682969-123683830	chr3	+	123683013	123683857	True	NR_028136,NM_022757	chr3,chr3	+,-	KALRN,CCDC14	129700,-2758
chr12:2987635-2988749	chr12	+	2987639	2988049	True	NR_027364,NR_027365,NM_202002,NR_027363,NM_202003,NM_021953	chr12,chr12,chr12,chr12,chr12,chr12	+,+,-,+,-,-	C12orf32,C12orf32,FOXM1,C12orf32,FOXM1,FOXM1	-1329,-1329,-1336,-1329,-1336,-1336
chr5:157415140-157415506	chr5	+	157415141	157415203	True	NM_014666,NM_173491	chr5,chr5	-,+	CLINT1,LSM11	-128958,-244437
chr8:24815015-24815609	chr8	+	24815041	24815403	True	NM_006158,NM_001105541	chr8,chr8	-,+	NEFL,NEFM	-910,-42637
chr11:86355205-86355834	chr11	+	86355213	86355818	True	NM_001014811,NM_007173	chr11,chr11	-,+	ME3,PRSS23	27477,155672
chr1:27112323-27113558	chr1	+	27112334	27113401	True	NM_017837,NM_018066,NM_001202554	chr1,chr1,chr1	+,-,+	PIGV,GPN2,PIGV	1052,103518,1277
chr16:1021227-1022355	chr16	+	1021651	1022333	True	NR_033646,NR_033645,NM_014587,NR_036442,NM_022773	chr16,chr16,chr16,chr16,chr16	-,-,+,-,-	LMF1,LMF1,SOX8,LMF1,LMF1	-667,9035,9474,9035,-667
chr12:56418453-56420014	chr12	+	56418684	56419615	True	NM_006928,NM_022465	chr12,chr12	-,+	PMEL,IKZF4	-58188,-4046
chr2:43149-44694	chr2	+	43169	44721	True	NM_001077710,NM_001040649	chr2,chr2	-,+	FAM110C,ACP1	1917,220147
chr14:63674429-63675687	chr14	+	63674490	63675550	True	NM_172376,NM_020663	chr14,chr14	-,+	KCNH5,RHOJ	-105906,-3409
chr17:61628241-61628459	chr17	+	61628257	61628387	True	NM_005828,NM_001915	chr17,chr17	+,-	DCAF7,CYB561	-486,-104535
chr13:45564865-45565079	chr13	+	45564897	45564965	True	NM_012345,NM_018559	chr13,chr13	-,+	NUFIP1,KIAA1704	-1284,-1269
chr22:39153505-39154844	chr22	+	39153666	39154795	True	NM_015374,NM_001199580,NM_001199579,NM_004286	chr22,chr22,chr22,chr22	-,-,-,+	SUN2,SUN2,SUN2,GTPBP1	-1642,-2199,-1642,-51911
chr12:57941052-57941307	chr12	+	57941097	57941312	True	NM_004984,NM_006400	chr12,chr12	+,-	KIF5A,DCTN2	2534,-119
chr8:41753793-41754129	chr8	+	41753868	41754022	True	NM_001134296,NM_001142446	chr8,chr8	+,-	AP3M2,ANK1	256441,308
chr6:43971028-43971731	chr6	+	43971101	43971693	True	NM_001171992,NM_153246,NM_032111	chr6,chr6,chr6	+,+,-	C6orf223,C6orf223,MRPL14	-2815,-2815,123548
chr3:51573623-51574505	chr3	+	51573646	51574490	True	NM_015106,NM_014703	chr3,chr3	+,-	RAD54L2,VPRBP	1105,-39628
chr7:17057642-17058788	chr7	+	17058766	17058830	True	NM_176813,NM_014399	chr7,chr7	-,+	AGR3,TSPAN13	-137153,-265469
chr1:116304692-116305326	chr1	+	116304697	116305354	True	NM_001232,NM_001172412	chr1,chr1	-,+	CASQ2,VANGL1	6125,-119498
chr6:80337038-80338386	chr6	+	80337103	80338419	True	NM_031469,NM_181714	chr6,chr6	+,-	SH3BGRL2,LCA5	2580,-89956
chr9:108012450-108013488	chr9	+	108012561	108013537	True	NM_080546,NM_005502	chr9,chr9	+,-	SLC44A1,ABCA1	-5683,-322034
chr20:62797438-62798183	chr20	+	62797453	62798014	True	NM_004535,NM_005286	chr20,chr20	+,-	MYT1,NPBWR2	-1677,-59269
chr16:25263998-25264545	chr16	+	25264246	25264550	True	NM_001012981,NM_001169	chr16,chr16	-,+	ZKSCAN2,AQP8	4355,-36012
chr16:67183643-67184039	chr16	+	67183668	67184034	True	NM_003789,NM_033309,NM_018378	chr16,chr16,chr16	-,-,+	TRADD,B3GNT9,FBXL8	9828,918,9856
chr20:43161682-43163403	chr20	+	43162123	43163452	True	NM_007066,NM_006811,NM_181805,NM_181804	chr20,chr20,chr20,chr20	+,-,+,+	PKIG,SERINC3,PKIG,PKIG	-1749,-11397,-1749,-1749
chr19:49140460-49140758	chr19	+	49140535	49140713	True	NM_001217,NM_001352,NR_004401	chr19,chr19,chr19	-,-,+	CA11,DBP,SEC1	8788,-24,582
chr9:34652300-34653118	chr9	+	34652359	34652945	True	NM_147162,NM_001142784,NM_000155,NM_004512,NM_006664	chr9,chr9,chr9,chr9,chr9	+,+,+,+,-	IL11RA,IL11RA,GALT,IL11RA,CCL27	986,-228,-5775,986,9794
chr4:89076776-89077246	chr4	+	89077064	89077185	True	NM_000297,NM_004827	chr4,chr4	+,-	PKD2,ABCG2	-148327,2885
chr7:100199762-100200071	chr7	+	100199852	100199920	True	NM_002319,NM_001040097,NM_002593	chr7,chr7,chr7	-,+,+	LRCH4,MOSPD3,PCOLCE	-16076,9804,-21
chr19:52873554-52873770	chr19	+	52873596	52873691	True	NM_001102657,NM_001145434	chr19,chr19	-,+	ZNF836,ZNF880	-198700,-490
chr7:26239485-26239770	chr7	+	26239552	26239759	True	NM_002137,NM_007276,NM_031243,NM_016587	chr7,chr7,chr7,chr7	-,+,-,+	HNRNPA2B1,CBX3,HNRNPA2B1,CBX3	705,1071,705,1564
chr22:32758974-32759540	chr22	+	32758989	32759567	True	NM_006604,NR_002596,NR_001450,NM_001098535	chr22,chr22,chr22,chr22	+,-,-,+	RFPL3,RFPL3S,RFPL3S,RFPL3	-8168,7546,7455,-5186
chr22:32758974-32759540	chr22	-	32583535	32583585	False	NM_006605,NR_033411	chr22,chr22	-,+	RFPL2,SLC5A1	5931,-128429
chr18:31805099-31805351	chr18	+	31805187	31805393	True	NM_001198548,NM_001392,NM_001198546,NM_001198547,NM_003787,NR_036752	chr18,chr18,chr18,chr18,chr18,chr18	-,+,-,-,-,-	NOL4,DTNA,NOL4,NOL4,NOL4,NOL4	-1672,267860,-1672,-2753,-1672,-2753
chr20:44330619-44331370	chr20	+	44330622	44331414	True	NM_172005,NM_172006,NM_172131	chr20,chr20,chr20	+,-,-	WFDC13,WFDC10B,WFDC10B	-18,2294,2294
chr2:220380540-220381089	chr2	+	220380702	220381080	True	NM_001195731,NM_018674,NM_182847	chr2,chr2,chr2	-,+,+	CHPF,ACCN4,ACCN4	26789,-1861,-1861
chr4:49497369-49497768	chr4	+	49497719	49497801	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-509505,-588904
chr16:58495636-58496550	chr16	+	58495700	58496476	True	NM_001130487,NR_002978,NM_020465,NM_022910	chr16,chr16,chr16,chr16	+,-,+,+	NDRG4,SNORA46,NDRG4,NDRG4	1517,86111,1072,2288
chr9:130851021-130851386	chr9	+	130851024	130851209	True	NM_197956,NM_001006643,NM_052901,NM_001006642	chr9,chr9,chr9,chr9	-,+,+,+	NAIF1,SLC25A25,SLC25A25,SLC25A25	-21425,9626,9607,2918
chr15:49094216-49096196	chr15	+	49094606	49096139	True	NM_014335,NM_014985,NM_001194998	chr15,chr15,chr15	+,-,-	EID1,CEP152,CEP152	74150,7254,7254
chr6:167272482-167272991	chr6	+	167272545	167272954	True	NM_007045,NM_001006932	chr6,chr6	+,-	FGFR1OP,RPS6KA2	139861,2880
chr1:160916998-160917790	chr1	+	160917738	160917822	True	NM_080878,NR_033385	chr1,chr1	-,+	ITLN2,KLHDC9	6817,150328
chr18:43757010-43757488	chr18	+	43757010	43757186	True	NM_001008239,NM_145055,NM_001001937	chr18,chr18,chr18	+,+,-	C18orf25,C18orf25,ATP5A1	-3076,-3076,-72811
chr12:108990722-108991023	chr12	+	108990788	108990980	True	NM_181724,NM_213595	chr12,chr12	-,+	TMEM119,ISCU	964,-34545
chr9:134614317-134614586	chr9	+	134614359	134614583	True	NM_007171,NM_005312	chr9,chr9	+,-	POMT1,RAPGEF1	-236121,-1434
chr8:6693245-6693518	chr8	+	6693293	6693555	True	NM_207411,NM_018361	chr8,chr8	-,+	XKR5,AGPAT5	-127,-127466
chr7:19813153-19813455	chr7	+	19813246	19813471	True	NM_152774,NM_002214	chr7,chr7	-,+	TMEM196,ITGB8	-842,557253
chr16:85785071-85785878	chr16	+	85785390	85785806	True	NM_001861,NM_206967	chr16,chr16	+,-	COX4I1,C16orf74	47366,-701
chr22:31365878-31367318	chr22	+	31365885	31367122	True	NR_002323,NM_014941	chr22,chr22	+,-	TUG1,MORC2	-302,-1698
chr12:121081441-121082577	chr12	+	121081534	121082508	True	NM_031205,NM_001033677,NM_198202,NM_004276	chr12,chr12,chr12,chr12	+,+,-,+	CABP1,CABP1,POP5,CABP1	5862,-3170,-62333,5862
chr12:131322947-131323163	chr12	+	131322954	131323132	True	NM_194356,NM_001980,NM_006325	chr12,chr12,chr12	-,-,+	STX2,STX2,RAN	729,729,33484
chr4:187168651-187169121	chr4	+	187168710	187169089	True	NM_000128,NR_033900	chr4,chr4	+,-	F11,LOC285441	18028,253182
chr19:18263959-18264164	chr19	+	18264053	18264131	True	NM_002866,NM_005027	chr19,chr19	-,+	RAB3A,PIK3R2	50793,-88
chr2:33125345-33126777	chr2	+	33125453	33126599	True	NR_027100,NM_021209	chr2,chr2	+,-	LOC285045,NLRC4	-17637,-634641
chr22:28312645-28314532	chr22	+	28312956	28314440	True	NR_036169,NR_026963,NR_026962,NM_012399,NR_036170	chr22,chr22,chr22,chr22,chr22	-,+,+,-,+	MIR3199-1,TTC28-AS1,TTC28-AS1,PITPNB,MIR3199-2	2210,923,923,865,2073
chr7:42274637-42275295	chr7	+	42274888	42275326	True	NM_000168,NR_027119	chr7,chr7	-,+	GLI3,LOC285954	1342,-541403
chr7:119414921-119415613	chr7	+	119414986	119415519	True	NM_012281,NM_012338	chr7,chr7	+,-	KCND2,TSPAN12	498202,1082719
chr7:100879877-100880114	chr7	+	100879940	100880094	True	NM_014343,NM_006349,NM_016068,NM_001185080	chr7,chr7,chr7,chr7	-,+,-,-	CLDN15,ZNHIT1,FIS1,CLDN15	1183,-19006,8327,2057
chr22:25373361-25375276	chr22	+	25373476	25374545	True	NM_001145206,NM_001001663	chr22,chr22	+,-	KIAA1671,TMEM211	49395,-38162
chr9:6646011-6646846	chr9	+	6646030	6646291	True	NM_000170,NM_001146696	chr9,chr9	-,+	GLDC,KDM4C	-338,74571
chr2:107001593-107003094	chr2	+	107001987	107003067	True	NR_003506,NM_001144013	chr2,chr2	+,-	PLGLA,RGPD3	-7,81788
chr2:107001593-107003094	chr2	-	87244639	87244689	False	NM_001032392,NM_002665,NM_001024457	chr2,chr2,chr2	-,-,+	PLGLB1,PLGLB2,RGPD1	4330,4334,-99952
chr2:107001593-107003094	chr2	+	88051017	88051937	False	NM_001032392,NM_001078170,NM_002665	chr2,chr2,chr2	+,-,+	PLGLB1,RGPD2,PLGLB2	-3458,73399,-3462
chr14:50085651-50086154	chr14	+	50085698	50086089	True	NM_002408,NM_001001	chr14,chr14	+,-	MGAT2,RPL36AL	1399,1311
chr19:39833013-39833228	chr19	+	39833163	39833243	True	NM_018028,NM_004877	chr19,chr19	+,-	SAMD4B,GMFG	-106,-6437
chr12:14956524-14958333	chr12	+	14956543	14958380	True	NM_175874,NM_016312,NM_001013698	chr12,chr12,chr12	+,-,-	C12orf60,WBP11,C12orf69	-88,-142,8795
chr19:44773740-44774597	chr19	+	44773943	44774305	True	NM_004234,NM_181756	chr19,chr19	-,+	ZNF235,ZNF233	34933,-9925
chr9:34397495-34398731	chr9	+	34397542	34398664	True	NM_012144,NM_032596	chr9,chr9	+,-	DNAI1,C9orf24	60146,-85
chr10:23215860-23216686	chr10	+	23216101	23216719	True	NM_005028,NM_173081	chr10,chr10	-,+	PIP4K2A,ARMC3	-212598,234
chr19:44577994-44578226	chr19	+	44578110	44578195	True	NM_001037813,NR_033341	chr19,chr19	+,-	ZNF284,LOC100379224	-1877,39206
chr19:50399111-50399531	chr19	+	50399171	50399503	True	NM_152899,NM_024682	chr19,chr19	-,+	IL4I1,TBC1D17	694,-18540
chr2:97561587-97561908	chr2	+	97561655	97561837	True	NM_001172667,NM_199078,NM_016490	chr2,chr2,chr2	-,+,-	FAM178B,CNNM3,FAM178B	-756,-79715,2083
chr15:59899013-59899671	chr15	+	59899080	59899448	True	NM_004751,NM_004492	chr15,chr15	+,-	GCNT3,GTF2A2	4533,50345
chr1:3820012-3820488	chr1	+	3820015	3820442	True	NR_024455,NM_207356	chr1,chr1	+,-	LOC100133612,C1orf174	-3098,-3158
chr7:97619061-97620888	chr7	+	97619430	97620856	True	NM_006188,NM_014916	chr7,chr7	-,+	OCM2,LMTK2	-14,115340
chr16:30583487-30583983	chr16	+	30583567	30583847	True	NM_001024683,NM_145271,NM_024031	chr16,chr16,chr16	-,-,+	ZNF688,ZNF688,PRR14	5,5,78393
chr5:176978938-176980304	chr5	+	176979062	176980212	True	NM_001190946,NM_017510,NR_024019	chr5,chr5,chr5	-,+,-	FAM193B,TMED9,FAM193B	1386,39000,1386
chr20:30553730-30555240	chr20	+	30553936	30555206	True	NM_030815,NM_001011718	chr20,chr20	-,+	PDRG1,XKR7	-14053,598
chr1:148930148-148930542	chr2	-	91845937	91846009	False	NR_003503,NR_027238	chr2,chr2	+,-	GGT8P,LOC654342	117358,2016
chr1:148930148-148930542	chr1	+	148930148	148930488	True	NR_027355,NR_027354,NM_001024599,NR_027356	chr1,chr1,chr1,chr1	+,+,-,+	LOC645166,LOC645166,HIST2H2BF,LOC645166	-1913,26,468791,-1913
chr22:38432073-38432600	chr22	+	38432288	38432552	True	NM_013356,NM_001039583	chr22,chr22	-,+	SLC16A8,PICK1	46668,20709
chr1:20122903-20123158	chr1	+	20122951	20123026	True	NM_015207,NM_181719	chr1,chr1	+,-	OTUD3,TMCO4	85861,3437
chr1:1403593-1404177	chr1	+	1403789	1403867	True	NR_026871,NM_031921	chr1,chr1	-,+	LOC441869,ATAD3B	-47139,3296
chr7:42779241-42780718	chr7	+	42779268	42780522	True	NM_031903,NM_001099858	chr7,chr7	+,-	MRPL32,C7orf25	191416,171227
chr19:48057882-48058205	chr19	+	48057891	48058054	True	NM_015711,NM_001101419	chr19,chr19	+,-	GLTSCR1,ZNF541	53398,1114
chr9:96105438-96106196	chr9	+	96105938	96106240	True	NM_001098808,NM_014612	chr9,chr9	-,+	C9orf129,FAM120A	2506,107932
chr8:146075450-146076016	chr8	+	146075450	146076046	True	NM_001081003,NM_001081004,NM_014066,NM_003416	chr8,chr8,chr8,chr8	-,-,-,+	COMMD5,COMMD5,COMMD5,ZNF7	2936,2455,2456,-22598
chr15:34629456-34629779	chr15	+	34629459	34629747	True	NM_133647,NM_001042496,NM_001042497,NM_001042494,NM_001042495,NM_018648,NM_175741	chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,-,-,-,-,+	SLC12A6,SLC12A6,SLC12A6,SLC12A6,SLC12A6,NOP10,C15orf55	-414,264,-414,264,568,5665,8318
chr3:113884200-113884923	chr3	+	113884320	113884838	True	NM_000796,NM_024638	chr3,chr3	-,+	DRD3,QTRTD1	13113,-108771
chr4:177699884-177701458	chr4	+	177700152	177701227	True	NM_021928,NM_005429	chr4,chr4	+,-	SPCS3,VEGFC	-459129,12725
chr17:6879823-6880493	chr17	+	6880064	6880522	True	NM_000697,NR_029712	chr17,chr17	+,-	ALOX12,MIR195	18861,40558
chr4:151501296-151501621	chr4	+	151501342	151501638	True	NM_006439,NM_001199282	chr4,chr4	+,-	MAB21L2,LRBA	1438,434848
chr2:231577266-231577483	chr2	+	231577269	231577361	True	NM_001130850,NM_005683,NM_001130849,NM_016289	chr2,chr2,chr2,chr2	+,-,+,+	CAB39,GPR55,CAB39,CAB39	901,212630,901,195
chr19:51474468-51475149	chr19	+	51474504	51474901	True	NM_005551,NM_001012964,NM_001012965,NM_002774	chr19,chr19,chr19,chr19	+,-,-,-	KLK2,KLK6,KLK6,KLK6	-97866,-2457,-2457,-1575
chr4:159443964-159445155	chr4	+	159444057	159445170	True	NM_001008393,NM_021634	chr4,chr4	-,+	C4orf46,RXFP1	148082,-1069
chr6:150390465-150390759	chr6	+	150390522	150390804	True	NM_030949,NM_024518	chr6,chr6	+,-	PPP1R14C,ULBP3	73383,-320
chr16:83842200-83842402	chr16	+	83842220	83842400	True	NM_001080442,NM_001537	chr16,chr16	-,+	SLC38A8,HSBP1	233412,-678
chr17:8701779-8702071	chr17	+	8701808	8701972	True	NM_152599,NM_004822	chr17,chr17	-,+	MFSD6L,NTN1	745,222886
chr11:18139279-18140390	chr11	+	18139278	18139978	True	NR_026576,NM_054031	chr11,chr11	-,+	SAA3P,MRGPRX3	-1599,2523
chr22:38201532-38201783	chr22	+	38201665	38201805	True	NM_138797,NM_014291,NM_005318,NM_001171690	chr22,chr22,chr22,chr22	-,+,+,+	ANKRD54,GCAT,H1F0,GCAT	38598,2106,-602,2106
chr6:160181460-160182442	chr6	+	160181624	160182442	True	NR_037166,NM_005891	chr6,chr6	-,+	LOC100129518,ACAT2	972,546
chr16:4468578-4469497	chr16	+	4468737	4469211	True	NM_005147,NM_001135110,NM_024535,NM_001201473,NM_001201472,NM_001201479	chr16,chr16,chr16,chr16,chr16,chr16	+,+,-,-,-,-	DNAJA3,DNAJA3,CORO7,CORO7,CORO7,CORO7-PAM16	6646,6646,-1775,-1775,-1775,-1775
chr20:52196569-52198113	chr20	+	52196783	52198053	True	NM_006526,NM_001193421	chr20,chr20	-,+	ZNF217,TSHZ2	1633,-395012
chr8:38386057-38387047	chr8	+	38386076	38386870	True	NM_207412,NM_001199660	chr8,chr8	-,+	C8orf86,LETM2	-50,-141478
chrX:19362707-19363408	chrX	+	19362827	19363303	True	NM_001173455,NM_001173454,NM_001173456,NM_000284,NM_001001671	chrX,chrX,chrX,chrX,chrX	+,+,+,+,-	PDHA1,PDHA1,PDHA1,PDHA1,MAP3K15	-868,-868,-868,-868,170126
chr10:29579418-29580635	chr10	+	29579441	29580615	True	NR_030335,NM_032517	chr10,chr10	-,+	MIR604,LYZL1	253468,-1509
chr8:102139993-102140401	chr8	+	102140263	102140341	True	NM_001042511,NR_033962	chr8,chr8	-,+	ZNF706,FLJ42969	77582,-76032
chr20:43147976-43148907	chr20	+	43148110	43148787	True	NM_198941,NM_007066,NM_006811	chr20,chr20,chr20	-,+,-	SERINC3,PKIG,SERINC3	1996,11648,1996
chr5:74330193-74330455	chr5	+	74330206	74330494	True	NM_014886,NM_016591	chr5,chr5	+,-	NSA2,GCNT4	-267154,-3482
chr12:570063-570441	chr12	+	570083	570487	True	NM_001042603,NM_173593	chr12,chr12	-,+	KDM5A,B4GALNT3	-71463,-591
chr6:35260460-35260697	chr6	+	35260473	35260695	True	NM_018679,NM_022047	chr6,chr6	-,+	TCP11,DEF6	-151286,4899
chrX:57166950-57168395	chrX	+	57167104	57168026	True	NM_019003,NM_174912	chrX,chrX	-,+	SPIN2A,FAAH2	-3046,145083
chr6:82787431-82788780	chr6	+	82787924	82788390	True	NM_006670,NM_015525	chr6,chr6	+,-	TPBG,IBTK	284532,169114
chr17:73084456-73084790	chr17	+	73084474	73084704	True	NM_006356,NM_004695	chr17,chr17	-,+	ATP5H,SLC16A5	-41400,-470
chr2:48011131-48011361	chr2	+	48011153	48011410	True	NM_025133,NM_000179	chr2,chr2	-,+	FBXO11,MSH6	104498,-983
chr22:26895576-26897008	chr22	+	26895603	26896804	True	NM_001013694,NM_001008697	chr22,chr22	+,-	SRRD,TFIP11	-15804,11684
chr2:224908374-224909025	chr2	+	224908448	224908767	True	NM_022915,NM_001136530,NM_006216,NM_001136528	chr2,chr2,chr2,chr2	+,-,-,-	MRPL44,SERPINE2,SERPINE2,SERPINE2	-86378,-5091,-4412,-4412
chr2:219432922-219433187	chr2	+	219432957	219433139	True	NM_005444,NM_020935	chr2,chr2	+,-	RQCD1,USP37	538,-1
chr21:44746159-44746611	chr21	+	44746235	44746478	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	123425,100575
chr19:17335180-17335564	chr19	+	17335371	17335447	True	NM_005234,NM_024578,NM_018467	chr19,chr19,chr19	-,+,+	NR2F6,OCEL1,USE1	20754,1607,-9267
chr4:1894006-1895565	chr4	+	1894009	1895613	True	NM_007331,NM_012318,NM_133330,NM_133331,NM_133334,NM_133335	chr4,chr4,chr4,chr4,chr4,chr4	+,-,+,+,+,+	WHSC1,LETM1,WHSC1,WHSC1,WHSC1,WHSC1	-123,-36035,-123,-123,6739,-123
chr4:7043096-7043852	chr4	+	7043126	7043612	True	NM_153376,NM_152293,NR_033828	chr4,chr4,chr4	-,+,-	CCDC96,TADA2B,LOC100129931	1166,1543,4396
chr19:40474923-40475841	chr19	+	40475118	40475851	True	NM_153001,NM_003890,NM_006503	chr19,chr19,chr19	+,-,+	PSMC4,FCGBP,PSMC4	1221,-34585,1221
chr12:15693847-15694800	chr12	+	15693879	15694646	True	NM_030668,NM_030669,NM_004447,NM_030671,NM_030670	chr12,chr12,chr12,chr12,chr12	+,+,-,+,+	PTPRO,PTPRO,EPS8,PTPRO,PTPRO	4639,4639,247925,4639,4639
chr9:135817664-135818479	chr9	+	135817705	135818508	True	NM_001135031,NM_001162426,NM_001162427,NM_000368	chr9,chr9,chr9,chr9	+,-,-,-	GFI1B,TSC1,TSC1,TSC1	35589,1563,1563,1563
chr2:176958960-176959227	chr2	+	176958960	176959260	True	NM_001080458,NM_021193,NM_000523	chr2,chr2,chr2	-,+,+	EVX2,HOXD12,HOXD13	-10270,5269,-1486
chr20:327889-328153	chr20	+	327976	328141	True	NM_153269,NM_024958	chr20,chr20	-,+	C20orf96,NRSN2	-56586,-657
chr1:87599928-87600512	chr1	+	87599972	87600544	True	NR_026989,NR_026988,NR_026987,NR_026986,NR_026985,NM_203341	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-	LOC339524,LOC339524,LOC339524,LOC339524,LOC339524,SEP15	-4576,-4576,-2415,-2415,-2415,-219865
chr11:63931781-63932280	chr11	+	63932032	63932166	True	NM_006819,NM_014067	chr11,chr11	+,-	STIP1,MACROD1	21420,1469
chr21:38442937-38443153	chr21	+	38442939	38443069	True	NM_001001894,NM_153682,NR_028352,NM_153681	chr21,chr21,chr21,chr21	+,-,-,-	TTC3,PIGP,PIGP,PIGP	2501,2447,2447,2092
chr10:97049287-97050306	chr10	+	97049375	97050108	True	NM_207321,NM_020992	chr10,chr10	+,-	C10orf129,PDLIM1	-95469,723
chr17:71306129-71306471	chr17	+	71306144	71306460	True	NM_012121,NM_017941	chr17,chr17	-,+	CDC42EP4,C17orf80	1733,-77419
chr2:233895358-233896319	chr2	+	233895682	233896250	True	NM_005383,NM_019850	chr2,chr2	+,-	NEU2,NGEF	1131,-17731
chr7:43799775-43800662	chr7	+	43799808	43800710	True	NM_000712,NM_018224	chr7,chr7	+,-	BLVRA,C7orf44	-1588,-30725
chr6:32724927-32726769	chr6	+	32725480	32725558	True	NM_020056,NM_001198858	chr6,chr6	+,-	HLA-DQA2,HLA-DQB2	-16368,5822
chr6:32724927-32726769	chr6_ssto_hap7	+	4157146	4157224	False	NM_020056,NM_001198858	chr6_ssto_hap7,chr6_ssto_hap7	+,-	HLA-DQA2,HLA-DQB2	-16366,5822
chr6:32724927-32726769	chr6_apd_hap1	+	4013759	4013837	False	NM_020056,NM_001198858	chr6_apd_hap1,chr6_apd_hap1	+,-	HLA-DQA2,HLA-DQB2	-16370,5822
chr6:32724927-32726769	chr6_cox_hap2	+	4171383	4171461	False	NM_020056,NM_001198858	chr6_cox_hap2,chr6_cox_hap2	+,-	HLA-DQA2,HLA-DQB2	-16370,5822
chr1:17092859-17093645	chr1	+	17092960	17093616	True	NR_002729,NR_037446	chr1,chr1	-,+	MST1P9,MIR3675	-1985,-85262
chr1:17092859-17093645	chr1	-	234951172	234951781	False	NM_182972,NR_033927	chr1,chr1	-,+	IRF2BP2,NCRNA00184	-205901,-186166
chr4:153593032-153593273	chr4	+	153593035	153593153	True	NM_152680,NM_001025593	chr4,chr4	-,+	TMEM154,ARFIP1	8214,107958
chr12:128048947-128049429	chr12	+	128049146	128049466	True	NR_033970,NR_033987	chr12,chr12	-,+	LOC440117,FLJ37505	-689910,316695
chr5:41870210-41870431	chr5	+	41870219	41870447	True	NM_000436,NM_175921	chr5,chr5	-,+	OXCT1,C5orf51	394,34022
chr5:127873572-127873805	chr5	+	127873684	127873758	True	NM_014031,NM_001999	chr5,chr5	+,-	SLC27A6,FBN2	427451,27
chr9:19304273-19304840	chr9	+	19304470	19304542	True	NM_001010,NM_017925	chr9,chr9	-,+	RPS6,DENND4C	75751,-13783
chr2:101093977-101094513	chr2	+	101094125	101094393	True	NM_004854,NM_001011717	chr2,chr2	-,+	CHST10,NMS	-59995,-7239
chr7:74683151-74684027	chr7	+	74683641	74683939	True	NM_001003795,NR_003580	chr7,chr7	+,-	GTF2IRD2B,LOC100093631	-175345,-30182
chr7:74683151-74684027	chr7	-	72538688	72538986	False	NR_003664,NR_003580	chr7,chr7	-,+	SPDYE8P,LOC100093631	-38379,30025
chr7:74683151-74684027	chr7	-	74348146	74348444	False	NM_001025202,NM_001145063	chr7,chr7	-,+	STAG3L2,GATSL1	-41415,30638
chr7:74683151-74684027	chr7	+	74897894	74898192	False	NM_001145064,NR_003664	chr7,chr7	-,+	GATSL2,SPDYE8P	-30553,38340
chr10:25497936-25498629	chr10	+	25498225	25498489	True	NM_020752,NR_027333	chr10,chr10	+,-	GPR158,LOC100128811	-33993,-33020
chr6:90023558-90025074	chr6	+	90023679	90024925	True	NM_014942,NM_002043	chr6,chr6	+,-	ANKRD6,GABRR2	117971,93
chr2:5834612-5836099	chr2	+	5834669	5835810	True	NR_034134,NM_003108	chr2,chr2	-,+	LOC727982,SOX11	-1130857,-1921
chr20:2791028-2792927	chr20	+	2791153	2792927	True	NM_001167670,NM_080739,NM_019609,NM_001184699	chr20,chr20,chr20,chr20	+,+,-,-	LOC100288797,C20orf141,CPXM1,CPXM1	4048,2729,-9861,-9861
chr12:133004018-133004405	chr12	+	133004181	133004385	True	NM_001142641,NM_001122636	chr12,chr12	+,-	FBRSL1,GALNT9	62771,-98276
chr2:113676246-113676563	chr2	+	113676308	113676602	True	NM_173204,NM_173205,NM_173202,NM_173203,NM_000576,NM_014439	chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,-,+	IL1F7,IL1F7,IL1F7,IL1F7,IL1B,IL1F7	-5820,-3598,-5820,-5820,-81952,-5820
chr5:37085120-37086840	chr5	+	37085357	37086839	True	NM_133433,NM_023073	chr5,chr5	+,-	NIPBL,C5orf42	-208547,162742
chr8:37620170-37620719	chr8	+	37620205	37620695	True	NR_003671,NM_007198	chr8,chr8	-,+	LOC728024,PROSC	-14641,-155
chr10:88986045-88986303	chr10	+	88986212	88986280	True	NM_001099338,NR_024397	chr10,chr10	+,-	FAM22A,LOC728190	-1058,116085
chr10:88986045-88986303	chr10	+	89118431	89118499	False	NM_001009610,NR_024397	chr10,chr10	+,-	FAM22D,LOC728190	-1005,-16116
chr10:88986045-88986303	chr10	+	81463990	81464058	False	NR_027512,NM_001098668	chr10,chr10	+,-	LOC650623,SFTPA2	-21310,-143827
chr10:88986045-88986303	chr10	+	81602121	81602189	False	NR_029407,NM_003019	chr10,chr10	+,-	LOC642361,SFTPD	-16514,106722
chr3:44906857-44907655	chr3	+	44906861	44907510	True	NR_030290,NM_003241,NM_020696,NM_144638	chr3,chr3,chr3,chr3	+,+,-,+	MIR564,TGM4,KIAA1143,TMEM42	-3532,8587,-103688,-3504
chr6:29909753-29910299	chr6	+	29909878	29910300	True	NR_001317,NM_002116	chr6,chr6	-,+	HCG4P6,HLA-A	-16450,8
chr6:29909753-29910299	chr6_apd_hap1	+	1149764	1150481	False	NR_001317,NM_002116	chr6_apd_hap1,chr6_apd_hap1	-,+	HCG4P6,HLA-A	-14477,94
chr6:29909753-29910299	chr6_cox_hap2	+	1421629	1422346	False	NR_001317,NM_002116	chr6_cox_hap2,chr6_cox_hap2	-,+	HCG4P6,HLA-A	-14478,94
chr15:85175457-85176185	chr15	+	85175585	85176079	True	NM_032856,NR_004859,NR_003654	chr15,chr15,chr15	-,+,+	WDR73,SCAND2,SCAND2	21492,-945,-945
chr2:174219709-174220002	chr2	+	174219781	174219989	True	NM_031942,NM_145810,NR_033882	chr2,chr2,chr2	+,+,-	CDCA7,CDCA7,LOC339751	-271,-271,-73017
chr8:66668984-66669778	chr8	+	66669145	66669830	True	NM_002603,NM_001145838	chr8,chr8	-,+	PDE7A,MTFR1	31554,-87096
chr17:41464545-41464957	chr17	+	41464552	41464932	True	NR_027412,NR_027413,NM_001661	chr17,chr17,chr17	-,-,+	LOC100130581,LOC100130581,ARL4D	1386,1386,11420
chr3:126193066-126193699	chr3	+	126193371	126193693	True	NM_001040653,NM_025112,NM_152889	chr3,chr3,chr3	-,-,+	ZXDC,ZXDC,CHST13	1119,1119,49482
chr1:222745994-222747859	chr1	+	222746176	222747865	True	NM_001201536,NM_198551	chr1,chr1	-,+	TAF1A,MIA3	15473,43578
chr7:102563347-102563989	chr7	+	102563512	102563916	True	NM_145032,NM_005824	chr7,chr7	-,+	FBXL13,LRRC17	151161,-10233
chr9:130216820-130217983	chr9	+	130216867	130217971	True	NM_001005374,NM_001190723,NM_001005373,NM_138361,NR_002449,NM_000976	chr9,chr9,chr9,chr9,chr9,chr9	+,+,+,+,-,-	LRSAM1,LRSAM1,LRSAM1,LRSAM1,SNORA65,RPL12	-2384,-3153,-3153,-3129,-5951,-3156
chr12:95945432-95946650	chr12	+	95945452	95946413	True	NM_032147,NM_006838,NM_001042403	chr12,chr12,chr12	-,+,-	USP44,METAP2,USP44	-189,-77691,-2832
chr19:30453010-30454674	chr19	+	30453028	30454639	True	NM_134447,NM_031448	chr19,chr19	+,-	C19orf2,C19orf12	-19654,-246576
chr17:48172223-48172459	chr17	+	48172240	48172358	True	NM_001199899,NM_001199898,NM_174920,NM_002611,NM_001199900	chr17,chr17,chr17,chr17,chr17	+,+,-,+,+	PDK2,PDK2,SAMD14,PDK2,PDK2	700,-190,34859,280,280
chr3:128880284-128880488	chr3	+	128880365	128880525	True	NM_001199469,NM_001204890,NM_016128,NM_020701	chr3,chr3,chr3,chr3	-,-,+,-	ISY1,ISY1-RAB43,COPG,ISY1	-292,-292,87927,-292
chr15:25415823-25416230	chr15	+	25415856	25416080	True	NR_003304,NM_130838,NR_003298,NR_003301,NR_001291,NR_003302,NR_003296,NR_003297,NR_003294,NR_003295	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,-,+,+,+,+,+,+,+,+	SNORD115-12,UBE3A,SNORD115-6,SNORD115-9,SNORD115-1,SNORD115-10,SNORD115-4,SNORD115-5,SNORD115-2,SNORD115-3	7807,234623,9563,7807,-37,7807,5898,7804,1701,3993
chr5:81611666-81612731	chr5	+	81611709	81612746	True	NM_001017971,NM_001025	chr5,chr5	+,-	ATP6AP1L,RPS23	-10595,-37474
chr10:49369472-49370886	chr10	+	49370053	49370139	True	NR_033172,NM_002750	chr10,chr10	-,+	FRMPD2P1,MAPK8	13157,239547
chr10:46341708-46342453	chr10	+	46341823	46341897	True	NM_133446,NM_015262	chr10,chr10	-,+	AGAP4,FAM21C	1082,-119230
chr10:46341708-46342453	chr10	+	51245437	51245511	False	NM_001077686,NM_002443	chr10,chr10	-,+	AGAP8,MSMB	1082,304041
chr17:34955764-34955980	chr17	+	34955779	34955953	True	NM_024864,NM_001033580,NM_024308	chr17,chr17,chr17	+,-,+	MRM1,MYO19,DHRS11	2071,-64474,-7604
chr19:15216424-15217997	chr19	+	15216965	15217989	True	NM_006844,NM_033025	chr19,chr19	-,+	ILVBL,SYDE1	18638,224
chr3:149765068-149766307	chr3	+	149765203	149766237	True	NM_053024,NR_036538	chr3,chr3	-,+	PFN2,LOC646903	-76462,-76194
chr16:1824594-1825091	chr16	+	1824719	1825061	True	NM_080861,NM_002513,NM_001010865,NM_023936,NM_012225	chr16,chr16,chr16,chr16,chr16	-,-,+,-,+	SPSB3,NME3,EME2,MRPS34,NUBP2	7570,-3009,-1541,-1579,7871
chr12:6677027-6677426	chr12	+	6677123	6677473	True	NM_002046,NM_001033714,NM_006170	chr12,chr12,chr12	+,-,-	GAPDH,NOP2,NOP2	-33517,57,57
chr8:95219207-95220795	chr8	+	95219537	95220715	True	NM_001161778,NM_004063,NM_001144663	chr8,chr8,chr8	+,-,-	PDP1,CDH17,CDH17	-289596,156,8872
chr20:34220609-34221594	chr20	+	34220744	34221603	True	NM_003915,NM_003116	chr20,chr20	-,+	CPNE1,SPAG4	20279,-16986
chr19:53072673-53073402	chr19	+	53073029	53073393	True	NM_001172655,NM_018260,NM_001105549	chr19,chr19,chr19	+,+,-	ZNF701,ZNF701,ZNF83	523,132,68301
chrX:151807139-151807445	chrX	+	151807186	151807436	True	NM_001129826,NM_018558	chrX,chrX	-,+	CSAG3,GABRQ	70284,-600
chr11:124253167-124253750	chr11	+	124253518	124253794	True	NM_001005468,NM_001005198	chr11,chr11	-,+	OR8B2,OR8G5	-279,-118846
chr22:24117405-24118681	chr22	+	24117572	24118724	True	NM_213720,NM_005940	chr22,chr22	-,+	CHCHD10,MMP11	-7431,-2587
chr14:75322831-75323611	chr14	+	75322889	75323626	True	NM_001933,NM_001080408	chr14,chr14	+,-	DLST,PROX2	24967,6962
chr3:79067182-79067445	chr3	+	79067254	79067442	True	NM_001128929,NM_001145845,NM_133631	chr3,chr3,chr3	+,-,-	ROBO2,ROBO1,ROBO1	-1920142,1217,1217
chr17:46892264-46893035	chr17	+	46892505	46892944	True	NM_005831,NM_001130918	chr17,chr17	+,-	CALCOCO2,TTLL6	15427,1584
chr6:149861673-149862867	chr6	+	149861796	149862584	True	NM_139126,NM_138785	chr6,chr6	-,+	PPIL4,C6orf72	4644,24943
chr5:52711597-52712831	chr5	+	52711867	52712368	True	NM_006350,NM_176806	chr5,chr5	+,-	FST,MOCS2	64226,-306269
chr13:52982570-52983040	chr13	+	52982901	52983084	True	NM_001098525,NM_199263,NM_018676	chr13,chr13,chr13	+,-,-	CKAP2,THSD1,THSD1	46410,-2272,-2272
chr2:96680800-96681936	chr2	+	96681135	96681562	True	NM_207328,NR_003698	chr2,chr2	-,+	GPAT2,LOC729234	19223,-4887
chr2:96680800-96681936	chr2	-	97755356	97755452	False	NM_199336,NM_001164315	chr2,chr2	-,+	FAHD2B,ANKRD36	5185,23780
chr2:85553811-85554077	chr2	+	85553826	85554086	True	NM_001135021,NM_006464	chr2,chr2	+,-	ELMOD3,TGOLN2	27756,1338
chr20:48347423-48348411	chr20	+	48347452	48348392	True	NM_015266,NM_004776	chr20,chr20	+,-	SLC9A8,B4GALT5	80857,-17031
chr8:87128656-87130022	chr8	+	87128851	87130042	True	NM_152565,NM_033126	chr8,chr8	+,-	ATP6V0D2,PSKH2	-17764,-47000
chr20:30102318-30102555	chr20	+	30102325	30102567	True	NM_001037500,NM_178582,NM_178580,NM_030789,NM_178581	chr20,chr20,chr20,chr20,chr20	-,+,+,+,+	DEFB124,HM13,HM13,HM13,HM13	-41509,-135,-135,-135,-135
chr5:133990820-133991127	chr5	+	133990845	133991063	True	NM_021982,NM_016103	chr5,chr5	+,-	SEC24A,SAR1B	-6424,-22312
chr3:48602677-48602895	chr3	+	48602698	48602890	True	NM_033629,NM_004567,NM_033199	chr3,chr3,chr3	+,-,-	TREX1,PFKFB4,UCN2	-95520,-8471,-1497
chr13:77460966-77461324	chr13	+	77460999	77461307	True	NR_026983,NM_138444	chr13,chr13	+,-	BTF3P11,KCTD12	41277,-459
chr1:48686682-48687522	chr1	+	48686868	48687468	True	NR_026749,NM_001011547,NM_001135181	chr1,chr1,chr1	-,+,+	SKINTL,SLC5A9,SLC5A9	-38768,888,888
chr12:52627648-52628283	chr12	+	52627690	52628305	True	NM_182507,NM_005556	chr12,chr12	-,+	KRT80,KRT7	-41906,-787
chr19:54059419-54060505	chr19	+	54059522	54060533	True	NM_001079907,NR_002938	chr19,chr19	+,-	ZNF331,LOC284379	-1022,46268
chr6:158403441-158404080	chr6	+	158403469	158404101	True	NM_003898,NM_032861	chr6,chr6	+,-	SYNJ2,SERAC1	-632,185261
chr7:158939357-158940105	chr7	+	158939359	158940143	True	NR_024394	chr7	+	LOC154822	-138365
chr15:43886048-43886253	chr15	+	43886048	43886284	True	NM_001190214,NM_014659,NM_001130858,NM_001130859,NM_020990	chr15,chr15,chr15,chr15,chr15	-,-,-,-,+	PPIP5K1,PPIP5K1,PPIP5K1,PPIP5K1,CKMT1B	-3597,-8958,-3597,-3597,-847
chr15:43886048-43886253	chr15	+	43985880	43986116	False	NM_001015001,NM_172097	chr15,chr15	+,-	CKMT1A,CATSPER2	-847,-44841
chr9:124330454-124331223	chr9	+	124330697	124331237	True	NR_003191,NM_032552	chr9,chr9	-,+	GGTA1,DAB2IP	-68391,-1350
chr3:8988958-8989298	chr3	+	8989044	8989314	True	NM_020165,NM_001234	chr3,chr3	-,+	RAD18,CAV3	15903,-213599
chr15:43660646-43661963	chr15	+	43660914	43661948	True	NM_014444,NM_152455	chr15,chr15	+,-	TUBGCP4,ZSCAN29	1364,360
chr1:242161202-242161617	chr1	+	242161202	242161324	True	NM_006027,NM_001004343	chr1,chr1	+,-	EXO1,MAP1LC3C	-149224,1115
chr6:122720903-122721157	chr6	+	122720916	122721092	True	NM_020755,NM_001135564,NM_004506	chr6,chr6,chr6	-,+,+	SERINC1,HSF2,HSF2	71910,-271,-271
chr14:75470312-75471800	chr14	+	75470342	75471707	True	NM_014239,NM_001040108	chr14,chr14	+,-	EIF2B2,MLH3	-781,46584
chr6:28235064-28236813	chr6	+	28235135	28236357	True	NM_001111039,NM_001023560,NM_001007531,NM_019110,NM_152736	chr6,chr6,chr6,chr6,chr6	+,+,+,-,+	ZNF187,ZNF187,NKAPL,ZKSCAN4,ZNF187	-399,-399,-8089,-15133,-399
chr17:62918637-62920535	chr17	+	62919163	62919507	True	NM_199340,NM_001165933	chr17,chr17	-,+	LRRC37A3,RGS9	-4260,213948
chr11:67290285-67290514	chr11	+	67290328	67290398	True	NM_003977,NM_016366	chr11,chr11	+,-	AIP,CABP2	-39874,551
chr20:1450462-1450679	chr20	+	1450580	1450728	True	NM_182483,NM_016143,NM_014723,NM_018839	chr20,chr20,chr20,chr20	-,-,+,-	NSFL1C,NSFL1C,SNPH,NSFL1C	-2163,-2163,-203672,-2163
chr17:74578875-74579380	chr17	+	74578905	74579134	True	NM_006456,NR_004395	chr17,chr17	-,+	ST6GALNAC2,SNORD1A	3070,-21241
chr6:147828190-147828604	chr6	+	147828216	147828548	True	NM_001030060,NR_034115	chr6,chr6	+,-	SAMD5,LOC729178	1279,-302466
chrX:106596203-106597076	chrX	+	106596530	106597000	True	NM_173494,NR_033676	chrX,chrX	+,-	CXorf41,NUP62CL	-146719,-146860
chr7:75621156-75621407	chr7	+	75621205	75621419	True	NM_031925,NR_002955	chr7,chr7	-,+	TMEM120A,SNORA14A	2623,-48155
chr16:57211060-57211397	chr16	+	57211132	57211449	True	NM_133368,NM_024946	chr16,chr16	+,-	RSPRY1,FAM192A	8791,8581
chr22:22240356-22241574	chr22	+	22240437	22241296	True	NM_148176,NM_138957	chr22,chr22	+,-	PPIL2,MAPK1	-220225,-18467
chr10:18948678-18949455	chr10	+	18948754	18949401	True	NM_178815,NM_182543	chr10,chr10	+,-	ARL5B,NSUN6	-492,-8204
chr12:6520309-6520694	chr12	+	6520359	6520421	True	NM_002342,NM_001159575	chr12,chr12	+,-	LTBR,SCNN1A	-27053,-33836
chr1:6304961-6305226	chr1	+	6304967	6305275	True	NM_012405,NM_001024598	chr1,chr1	-,+	ICMT,HES3	-8923,-766
chr17:34125761-34126702	chr17	+	34125775	34126755	True	NM_001032278,NM_024302,NM_003487,NM_139215	chr17,chr17,chr17,chr17	-,-,+,+	MMP28,MMP28,TAF15,TAF15	-3135,-3135,9732,9732
chr11:67084961-67085162	chr11	+	67085011	67085133	True	NM_021173,NR_024469	chr11,chr11	-,+	POLD4,LOC100130987	35969,176
chr12:58120662-58121396	chr12	+	58120677	58121345	True	NM_001122772,NR_027032	chr12,chr12	-,+	AGAP2,LOC100130776	10734,-705
chr19:35849469-35849823	chr19	+	35849469	35849867	True	NM_005303,NM_152481,NM_005304	chr19,chr19,chr19	+,-,+	FFAR1,FAM187B,FFAR3	-7075,-129841,-32
chr19:35849469-35849823	chr19	+	35861938	35862336	False	NM_207392,NM_005304	chr19,chr19	-,+	KRTDAP,FFAR3	119070,-12501
chr20:49347049-49347448	chr20	+	49347054	49347387	True	NM_032521,NM_080829	chr20,chr20	+,-	PARD6B,FAM65C	693,-93628
chr11:617636-617952	chr11	+	617702	617980	True	NM_004031,NM_000797,NM_004029,NM_001171968,NM_021924,NM_021920,NM_001572,NM_031264	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,+,-,-,-,-,-,-	IRF7,DRD4,IRF7,CDHR5,CDHR5,SCT,IRF7,CDHR5	-1974,19324,-1703,7137,7137,9243,-1703,7137
chr10:105129413-105129707	chr10	+	105129432	105129636	True	NM_006951,NM_032154	chr10,chr10	+,-	TAF5,PCGF6	-1759,-18541
chr17:8532779-8533068	chr17	+	8532907	8533063	True	NM_030808,NM_005964	chr17,chr17	+,-	NDEL1,MYH10	-193779,1023
chr9:115808823-115809109	chr9	+	115808874	115809112	True	NM_003408,NR_024366	chr9,chr9	-,+	ZFP37,NCRNA00256A	9934,66063
chr1:169277112-169278710	chr1	+	169277314	169278597	True	NM_003666,NM_013330	chr1,chr1	+,-	BLZF1,NME7	58596,58642
chr20:42296680-42297133	chr20	+	42296787	42297182	True	NM_001008901,NM_002466	chr20,chr20	-,+	GTSF1L,MYBL2	58510,-1129
chr2:209274715-209275690	chr2	+	209274805	209275702	True	NM_005896,NM_005048	chr2,chr2	-,+	IDH1,PTH2R	-154999,-3300
chr12:10088895-10089295	chr12	+	10088926	10089326	True	NM_138337,NM_001130711	chr12,chr12	+,-	CLEC12A,CLEC2A	34681,-3946
chr11:15096272-15096631	chr11	+	15096288	15096672	True	NM_001741,NM_000728	chr11,chr11	-,+	CALCA,CALCB	-102456,-1193
chr2:166900331-166901218	chr2	+	166900394	166901236	True	NM_024969,NM_001165963	chr2,chr2	+,-	CSRNP3,SCN1A	-471599,28968
chr3:44751461-44752539	chr3	+	44751492	44752354	True	NM_020696,NM_033210,NM_001134442,NM_001134441,NM_001134440	chr3,chr3,chr3,chr3,chr3	-,+,+,+,+	KIAA1143,ZNF502,ZNF502,ZNF502,ZNF502	50871,1780,1780,1780,1780
chr22:35846326-35846595	chr22	+	35846330	35846630	True	NM_005368,NM_006739	chr22,chr22	-,+	MB,MCM5	166804,-50265
chr9:35563063-35563596	chr9	+	35563068	35563580	True	NM_001099951,NM_001135999,NM_001164310	chr9,chr9,chr9	-,+,-	FAM166B,RUSC2,FAM166B	366,-24490,366
chr21:14424683-14424948	chr2	-	132904930	132904980	True	NM_001508,NR_027019	chr2,chr2	+,-	GPR39,ANKRD30BL	269166,14595
chr5:95005881-95006523	chr5	+	95005918	95006562	True	NM_031952,NM_173362	chr5,chr5	-,+	SPATA9,RFESD	12202,-23387
chr11:111959129-111959661	chr11	+	111959252	111959610	True	NM_003002,NR_028383,NM_012459	chr11,chr11,chr11	+,-,-	SDHD,TIMM8B,TIMM8B	-1740,-1730,-1730
chr19:34918735-34919129	chr19	+	34918988	34919134	True	NR_027620,NM_005499	chr19,chr19	-,+	LOC643719,UBA2	149512,133
chr14:74708390-74708901	chr14	+	74708436	74708839	True	NM_182894,NM_005050	chr14,chr14	+,-	VSX2,ABCD4	-2312,60978
chr17:17382093-17382912	chr17	+	17382191	17382793	True	NM_018019,NM_001199989	chr17,chr17	+,-	MED9,RASD1	-1949,16966
chr11:108541248-108542710	chr11	+	108541299	108542354	True	NM_015065,NM_004398	chr11,chr11	-,+	EXPH5,DDX10	-76925,-5534
chr2:241633120-241633584	chr2	+	241633125	241633549	True	NM_198998,NM_001102467	chr2,chr2	+,-	AQP12A,AQP12B	-1914,-10808
chr2:241633120-241633584	chr2	-	241620185	241620460	False	NM_198998,NM_001102467	chr2,chr2	+,-	AQP12A,AQP12B	10801,1907
chr11:55752030-55753268	chr11	+	55752392	55753098	True	NM_003697,NM_001001921,NR_027688	chr11,chr11,chr11	-,+,-	OR5F1,OR5AS1,OR7E5P	9063,44796,843
chr19:34855576-34855858	chr19	+	34855611	34855775	True	NR_027620,NM_001184722,NM_000175	chr19,chr19,chr19	-,+,+	LOC643719,GPI,GPI	212873,-17,256
chr14:70826028-70826708	chr14	+	70826259	70826651	True	NM_001204090,NM_003813,NM_016468	chr14,chr14,chr14	-,+,-	COX16,ADAM21,COX16	5,97565,5
chr6:109764402-109764884	chr6	+	109764428	109764834	True	NM_173672,NM_003080,NM_001111298	chr6,chr6,chr6	-,+,-	PPIL6,SMPD2,PPIL6	-2054,-2548,-2054
chr6:114286828-114287218	chr6	+	114286906	114287269	True	NM_001527,NR_027060,NR_033441	chr6,chr6,chr6	-,+,-	HDAC2,FLJ34503,HDAC2	5146,-61415,5146
chr11:62418043-62418741	chr11	+	62418341	62418588	True	NM_001043229,NM_030628,NM_198335,NM_198334	chr11,chr11,chr11,chr11	+,-,-,-	METTL12,INTS5,GANAB,GANAB	14190,2245,-4237,-4237
chr7:32998871-32999817	chr7	+	32999230	32999724	True	NM_007270,NR_003500	chr7,chr7	+,-	FKBP9,RP9P	-2276,-16448
chr7:74073877-74074610	chr7	+	74074181	74074511	True	NM_173537,NM_001518,NM_033001,NM_033000,NM_001163636,NM_032999	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,+,+	GTF2IRD2,GTF2I,GTF2I,GTF2I,GTF2I,GTF2I	193390,-2202,-2202,-2202,-2202,-2202
chr1:155214324-155214573	chr1	+	155214332	155214584	True	NM_000157,NM_020897,NM_001171812,NM_001171811,NM_001005742,NM_001005741	chr1,chr1,chr1,chr1,chr1,chr1	-,+,-,-,-,-	GBA,HCN3,GBA,GBA,GBA,GBA	-3263,32789,-3266,119,119,119
chr7:73151527-73152392	chr7	+	73151605	73152387	True	NM_148912,NM_148913,NR_026910,NR_026912,NR_026690,NM_001145364	chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,+,-	ABHD11,ABHD11,ABHD11,ABHD11,WBSCR26,ABHD11	847,847,847,853,-2257,847
chr15:49099726-49101246	chr15	+	49099929	49101239	True	NM_014335,NM_014985,NM_001194998	chr15,chr15,chr15	+,-,-	EID1,CEP152,CEP152	69050,2156,2156
chrX:49396135-49396941	chrX	+	49396175	49396748	True	NM_003785,NM_001468	chrX,chrX	-,+	PAGE1,GAGE1	63898,-32618
chr20:4796602-4797673	chr20	+	4797051	4797454	True	NM_012409,NM_170774,NM_014737	chr20,chr20,chr20	+,-,-	PRND,RASSF2,RASSF2	-94546,-1282,6899
chr22:31481862-31482096	chr22	+	31481867	31482097	True	NM_134269,NM_006932,NM_134270,NM_080430	chr22,chr22,chr22,chr22	+,+,+,-	SMTN,SMTN,SMTN,SELM	-4613,-4613,-4613,21504
chr22:38798026-38798266	chr22	+	38798041	38798270	True	NM_016657,NR_002821	chr22,chr22	+,-	KDELR3,LOC400927	65812,-3110
chr10:22516460-22517257	chr10	+	22516522	22517295	True	NM_001199938,NM_012071	chr10,chr10	-,+	EBLN1,COMMD3	-17610,88016
chr17:20368780-20369479	chr17	+	20368913	20369501	True	NM_001190790,NM_001042685	chr17,chr17	+,-	CDRT15L2,LGALS9B	113535,1397
chr17:20368780-20369479	chr17	-	18381624	18382037	False	NR_003554,NM_001040078	chr17,chr17	-,+	LOC220594,LGALS9C	42579,-1576
chr15:77362378-77362718	chr15	+	77362404	77362704	True	NM_003978,NM_005724,NM_198902,NM_001168412	chr15,chr15,chr15,chr15	+,-,-,-	PSTPIP1,TSPAN3,TSPAN3,TSPAN3	-74991,916,916,916
chrX:46431245-46432802	chrX	+	46431499	46432817	True	NM_001190417,NM_019886	chrX,chrX	-,+	ZNF674,CHST7	-26607,374
chr4:186734528-186734968	chr4	+	186734533	186734927	True	NM_001145670,NM_001145671,NM_001145672,NM_003603,NM_003265	chr4,chr4,chr4,chr4,chr4	-,-,-,-,+	SORBS2,SORBS2,SORBS2,SORBS2,TLR3	-1123,-2308,-2485,-1141,255381
chr4:119464203-119466198	chr4	+	119464202	119465512	True	NR_003135,NM_003619	chr4,chr4	+,-	CEP170P1,PRSS12	-26765,-190280
chr4:119464203-119466198	chr1	-	243299491	243300282	False	NM_006642,NR_029401	chr1,chr1	+,-	SDCCAG8,LOC731275	119024,-34445
chr19:40432966-40433368	chr19	+	40433015	40433385	True	NM_003890,NM_006503	chr19,chr19	-,+	FCGBP,PSMC4	7198,43687
chr20:33266801-33267984	chr20	+	33267057	33267517	True	NM_080476,NM_021202	chr20,chr20	-,+	PIGU,TP53INP2	-1968,24630
chr1:236559111-236559333	chr1	+	236559237	236559309	True	NM_145861,NM_019891,NM_080738	chr1,chr1,chr1	+,-,+	EDARADD,ERO1LB,EDARADD	-1608,-113898,-572
chr22:44258547-44259226	chr22	+	44258580	44258875	True	NM_025225,NM_014351	chr22,chr22	+,-	PNPLA3,SULT4A1	60743,-202
chr12:27921902-27923578	chr12	+	27921988	27922947	True	NM_001146221,NM_020782	chr12,chr12	-,+	LOC100287284,KLHDC5	1326,10239
chr2:242258206-242259947	chr2	+	242258494	242259935	True	NM_005336,NM_006155,NM_001008491,NM_001008492,NM_004404	chr2,chr2,chr2,chr2,chr2	-,+,+,+,+	HDLBP,SEPT2,SEPT2,SEPT2,SEPT2	-3240,-3833,-3833,-3275,-3275
chr1:201392783-201393990	chr1	+	201392847	201393987	True	NM_003281,NR_026667	chr1,chr1	-,+	TNNI1,RPS10P7	-1973,95044
chr10:70717573-70718283	chr10	+	70717623	70717778	True	NM_004728,NM_152707	chr10,chr10	+,-	DDX21,SLC25A16	-1784,-430343
chr17:8023277-8023968	chr17	+	8023410	8023862	True	NM_001165967,NR_036201,NM_021628,NM_001165960,NM_032580	chr17,chr17,chr17,chr17,chr17	-,+,-,-,-	HES7,MIR4314,ALOXE3,ALOXE3,HES7	3598,-32094,-1550,-1176,3598
chrX:38420167-38420448	chrX	+	38420209	38420469	True	NM_001034853,NM_004615	chrX,chrX	-,+	RPGR,TSPAN7	-233421,261
chr4:7436009-7436215	chr4	+	7436008	7436158	True	NR_036238,NM_001085382	chr4,chr4	+,-	MIR4274,PSAPL1	25596,592
chrX:48059065-48060915	chrX	+	48059322	48060421	True	NM_175723,NM_021015,NM_005635	chrX,chrX,chrX	-,-,+	SSX5,SSX5,SSX1	-3123,-3123,54375
chr1:161128874-161129227	chr1	+	161129002	161129276	True	NM_016406,NM_001122764,NM_012475,NM_000309,NM_001199873,NM_001014443	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,-,+	UFC1,PPOX,USP21,PPOX,B4GALT3,USP21	-5519,6904,-23,6904,18532,-23
chr21:44497139-44497525	chr21	+	44497238	44497446	True	NM_000394,NM_000071,NM_001178009,NM_001178008	chr21,chr21,chr21,chr21	+,-,-,-	CRYAA,CBS,CBS,CBS	91694,-1198,-766,-766
chr12:123704965-123705524	chr12	+	123705138	123705204	True	NM_022782,NM_152269	chr12,chr12	-,+	MPHOSPH9,C12orf65	1287,12639
chr1:155244090-155244510	chr1	+	155244317	155244391	True	NM_003993,NM_020897	chr1,chr1	-,+	CLK2,HCN3	-1036,2982
chr22:35695445-35695668	chr22	+	35695494	35695642	True	NM_001135729,NM_005368,NM_001135732,NM_001135730,NM_005488,NR_024194,NR_024195	chr22,chr22,chr22,chr22,chr22,chr22,chr22	+,-,+,+,+,+,+	TOM1,MB,TOM1,TOM1,TOM1,TOM1,TOM1	-277,317792,154,154,154,154,154
chr11:130321752-130322100	chr11	+	130321760	130322146	True	NM_007037,NM_139055	chr11,chr11	-,+	ADAMTS8,ADAMTS15	-23221,-2942
chr9:34649497-34649997	chr9	+	34649500	34649990	True	NM_000155,NM_001142784,NM_004512,NM_147162,NM_005866	chr9,chr9,chr9,chr9,chr9	+,+,+,+,-	GALT,IL11RA,IL11RA,IL11RA,SIGMAR1	-2916,2191,3941,3941,-11732
chr10:18926185-18926614	chr10	+	18926184	18926631	True	NM_178815,NM_182543	chr10,chr10	+,-	ARL5B,NSUN6	21681,13980
chr3:62309779-62311621	chr3	+	62310206	62311221	True	NM_020685,NM_018008	chr3,chr3	+,-	C3orf14,FEZF2	-4862,48028
chr9:132805666-132805877	chr9	+	132805686	132805766	True	NM_001136557,NM_015033	chr9,chr9	+,-	GPR107,FNBP1	10218,-213
chr10:91138728-91139646	chr10	+	91138828	91139519	True	NM_001010987,NM_000235	chr10,chr10	+,-	IFIT1B,LIPA	-1071,-127168
chr7:17978925-17979443	chr7	+	17978934	17979343	True	NM_001204144,NM_015132	chr7,chr7	+,-	HDAC9,SNX13	147228,841
chr17:8927108-8927509	chr17	+	8927126	8927542	True	NM_004822,NM_001142633	chr17,chr17	+,-	NTN1,PIK3R5	-2318,-58102
chr11:55590816-55591565	chr11	+	55591028	55591555	True	NM_001004739,NM_001001952,NM_001001960	chr11,chr11,chr11	+,+,-	OR5L2,OR5D18,OR5W2	3139,-3975,90554
chr8:116679832-116680218	chr8	+	116679847	116680255	True	NM_014112,NM_032334	chr8,chr8	-,+	TRPS1,UTP23	1023,1098486
chr9:99209447-99211415	chr9	+	99209685	99211398	True	NM_153695,NM_014282	chr9,chr9	-,+	ZNF367,HABP4	-29016,1015
chr6:170202325-170202679	chr6	+	170202332	170202680	True	NR_026781,NR_026780	chr6,chr6	-,+	NCRNA00242,C6orf208	-3411,-12214
chr14:31496183-31496588	chr14	+	31496227	31496594	True	NM_001083893,NM_007077,NM_014574,NM_001128126	chr14,chr14,chr14,chr14	-,+,-,+	STRN3,AP4S1,STRN3,AP4S1	-620,-1595,-620,-1595
chr2:27858651-27859928	chr2	+	27858692	27859310	True	NM_001145047,NR_026735,NM_001142683,NM_007266,NM_024584,NM_001145049,NM_001145048	chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,+,-,+,-,+,+	GPN1,GPN1,CCDC121,GPN1,CCDC121,GPN1,GPN1	-7235,-6887,-6947,-6887,-6794,-7235,-7235
chr15:41142562-41142807	chr15	+	41142620	41142829	True	NM_017726,NM_003710,NM_181642,NM_001032367	chr15,chr15,chr15,chr15	-,+,+,+	PPP1R14D,SPINT1,SPINT1,SPINT1	-21713,-6425,-6425,-6028
chr10:99473970-99474199	chr10	+	99473974	99474142	True	NR_026754,NM_031484	chr10,chr10	-,+	LOC100270710,MARVELD1	3810,-560
chr19:2283639-2284258	chr19	+	2283847	2284295	True	NM_198532,NM_004152	chr19,chr19	-,+	C19orf35,OAZ1	-1666,-14378
chr19:20325551-20326311	chr19	+	20326138	20326288	True	NM_033196,NM_052852	chr19,chr19	-,+	ZNF682,ZNF486	-175861,-48109
chr4:7107044-7107726	chr4	+	7107167	7107635	True	NR_027441,NM_152293	chr4,chr4	-,+	FLJ36777,TADA2B	-2064,-62062
chr19:9248184-9248930	chr19	+	9248310	9248933	True	NM_001190791,NM_020933,NM_001001958	chr19,chr19,chr19	+,+,-	ZNF317,ZNF317,OR7G3	2122,2122,-10684
chr18:28680358-28680707	chr18	+	28680511	28680741	True	NM_001942,NM_004949,NM_024422	chr18,chr18,chr18	+,-,-	DSG1,DSC2,DSC2	217310,1697,1697
chr19:5978783-5979314	chr19	+	5978923	5979177	True	NM_080590,NM_007322,NM_003624,NM_007320	chr19,chr19,chr19,chr19	+,-,-,-	CAPS,RANBP3,RANBP3,RANBP3	-64781,-603,-603,-603
chr17:73936630-73936880	chr17	+	73936645	73936861	True	NM_001080542,NM_001113324	chr17,chr17	-,+	FBF1,C17orf106	308,38436
chr1:182417397-182417767	chr1	+	182417736	182417816	True	NM_172000,NM_001137669	chr1,chr1	-,+	TEDDM1,RGSL1	-47985,1439
chr19:41306566-41308499	chr19	+	41307012	41308515	True	NM_000762,NM_053046,NM_080732	chr19,chr19,chr19	-,+,+	CYP2A6,EGLN2,EGLN2	47887,-1729,-2015
chr3:186735854-186737806	chr3	+	186736200	186737809	True	NM_003032,NM_052969	chr3,chr3	+,-	ST6GAL1,RPL39L	1855,119505
chr1:33816077-33817273	chr1	+	33816081	33817190	True	NM_004427,NM_152493	chr1,chr1	-,+	PHC2,ZNF362	-582,-93958
chr9:107524081-107525112	chr9	+	107524284	107524974	True	NM_018376,NM_001001956	chr9,chr9	+,-	NIPSNAP3B,OR13C9	1476,-143799
chr19:42760786-42761073	chr19	+	42760880	42760990	True	NM_006494,NM_015125	chr19,chr19	-,+	ERF,CIC	-1571,27826
chr1:228645510-228645987	chr1	+	228645533	228645813	True	NM_033445,NM_175055	chr1,chr1	-,+	HIST3H2A,HIST3H2BB	27,-6
chr1:46906915-46908158	chr1	+	46907064	46908189	True	NM_001097611,NM_001441	chr1,chr1	-,+	KNCN,FAAH	108748,-47183
chr11:68039014-68039299	chr11	+	68039092	68039318	True	NM_022338,NM_002335	chr11,chr11	-,+	C11orf24,LRP5	201,40789
chr6:45983697-45984202	chr6	+	45984000	45984250	True	NM_016929,NM_014936	chr6,chr6	-,+	CLIC5,ENPP4	-403,113450
chr2:220108193-220108683	chr2	+	220108285	220108521	True	NR_026909,NR_003063,NM_001008910,NM_024506	chr2,chr2,chr2,chr2	+,+,+,-	STK16,TUBA4B,STK16,GLB1L	1679,9443,1670,1660
chr14:105992113-105992510	chr14	+	105992119	105992325	True	NM_025268,NM_001519	chr14,chr14	+,-	TMEM121,BRF1	627,-224790
chr18:6408950-6410020	chr18	+	6409069	6409943	True	NM_173464,NM_001010000	chr18,chr18	-,+	L3MBTL4,ARHGAP28	5017,424488
chr12:54862198-54863780	chr12	+	54862334	54863682	True	NM_005337,NM_144594	chr12,chr12	+,-	NCKAP1L,GTSF1	27812,3758
chr5:143189244-143190998	chr5	+	143189762	143190994	True	NM_021182,NM_001024947	chr5,chr5	+,-	HMHB1,YIPF5	731,359341
chr12:56359004-56359914	chr12	+	56359057	56359815	True	NM_001798,NM_002868,NM_001200053,NM_006928,NM_001200054,NM_052827	chr12,chr12,chr12,chr12,chr12,chr12	+,+,-,-,-,+	CDK2,RAB5B,PMEL,PMEL,PMEL,CDK2	740,8046,81,731,81,740
chr19:38924594-38925294	chr19	+	38924609	38925307	True	NM_170604,NM_001146204,NM_001146205,NM_001146206,NM_001146207,NM_001146202,NM_001146203,NM_000540,NM_001042723	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,+,+	RASGRP4,RASGRP4,RASGRP4,RASGRP4,RASGRP4,RASGRP4,RASGRP4,RYR1,RYR1	-7664,-7664,-7664,-7664,-7664,-7664,-7664,-320,-320
chr3:122233881-122234256	chr3	+	122233942	122234168	True	NM_002264,NM_138287,NR_026698	chr3,chr3,chr3	-,+,-	KPNA1,DTX3L,KPNA1	-156,49016,-156
chr11:22754245-22754664	chr11	+	22754244	22754715	True	NM_005256,NM_148893	chr11,chr11	+,-	GAS2,SVIP	-57985,96722
chr16:67877411-67878516	chr16	+	67877466	67878423	True	NM_025082,NM_020457,NM_005796	chr16,chr16,chr16	-,+,+	CENPT,THAP11,NUTF2	2988,-1304,2395
chr1:16008913-16009748	chr1	+	16009335	16009675	True	NM_024758,NM_015164	chr1,chr1	-,+	AGMAT,PLEKHM2	-97730,1151
chr1:151801887-151802720	chr1	+	151801897	151802559	True	NR_024237,NM_001001523,NM_005060	chr1,chr1,chr1	+,-,-	LOC100132111,RORC,RORC	8385,-3344,1839
chr6:109776545-109776766	chr6	+	109776544	109776796	True	NM_001159291,NM_022765,NM_003080	chr6,chr6,chr6	-,-,+	MICAL1,MICAL1,SMPD2	444,444,-14664
chr6:72297530-72298308	chr6	+	72297530	72298281	True	NR_026807,NM_014989	chr6,chr6	-,+	C6orf155,RIMS1	-167082,298368
chr1:38322939-38324701	chr1	+	38323018	38324683	True	NM_198446,NM_005955	chr1,chr1	+,-	C1orf122,MTF1	-49596,659
chr1:174842365-174842742	chr1	+	174842540	174842650	True	NM_001035230,NM_022100	chr1,chr1	+,-	RABGAP1L,MRPS14	2033,150001
chr14:91720434-91720678	chr14	+	91720511	91720597	True	NM_001177676,NR_003709,NM_003485	chr14,chr14,chr14	-,+,-	GPR68,SNORA11B,GPR68	-9659,-127792,-287
chr21:11168756-11169008	chr21	+	11168768	11168931	True	NM_001187,NR_037458	chr21,chr21	-,+	BAGE,MIR3687	-69831,-1342616
chr19:38269135-38269739	chr19	+	38269136	38269677	True	NM_001172689,NM_001172690,NM_001172691,NM_001172692,NM_015073,NM_152360	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,+,-	ZNF573,ZNF573,ZNF573,ZNF573,SIPA1L3,ZNF573	604,604,604,604,128190,604
chr1:115200561-115201990	chr1	+	115200581	115201846	True	NM_003176,NM_198459	chr1,chr1	+,-	SYCP1,DENND2C	195608,10936
chr2:37451453-37453312	chr2	+	37451466	37452425	True	NM_144736,NM_001083946,NM_005760	chr2,chr2,chr2	+,+,-	C2orf56,C2orf56,CEBPZ	6348,6348,6365
chr19:10626450-10627802	chr19	+	10626636	10627546	True	NM_001166215,NM_030760,NM_032885	chr19,chr19,chr19	-,-,+	S1PR5,S1PR5,ATG4D	1172,630,27100
chr5:131888585-131889348	chr5	+	131888742	131889348	True	NM_005732,NM_000879	chr5,chr5	+,-	RAD50,IL5	3267,-9528
chr12:1928536-1929410	chr12	+	1928661	1929239	True	NM_001039029,NM_001163925,NM_001163926,NM_172364	chr12,chr12,chr12,chr12	+,+,+,-	LRTM2,LRTM2,LRTM2,CACNA2D4	193,193,193,98681
chr11:5600939-5601834	chr11	+	5601147	5601499	True	NM_001005162,NM_001005289	chr11,chr11	+,-	OR52B6,OR52H1	607,-34394
chr11:46719871-46720974	chr11	+	46720253	46720952	True	NM_004308,NM_001184751,NM_024741	chr11,chr11,chr11	-,+,+	ARHGAP1,ZNF408,ZNF408	1225,1691,1364
chr11:118877238-118877674	chr11	+	118877366	118877436	True	NM_198489,NR_003040	chr11,chr11	+,-	CCDC84,RPL23AP64	-8565,-3063
chr17:17874847-17875192	chr17	+	17874862	17875088	True	NM_001130090,NM_001130091,NM_001130092,NM_001033551,NM_031294,NM_001082968	chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,-,+,-	LRRC48,LRRC48,LRRC48,TOM1L2,LRRC48,TOM1L2	1038,1038,1038,746,1038,746
chr3:10157874-10159858	chr3	+	10157929	10159649	True	NM_173472,NM_018462,NM_001164839	chr3,chr3,chr3	-,+,-	C3orf24,C3orf10,C3orf24	-8014,-647,-8014
chr1:223853968-223855631	chr1	+	223854048	223855648	True	NM_001146068,NM_001143962	chr1,chr1	+,-	CAPN2,CAPN8	33646,-612
chr16:28551799-28552255	chr16	+	28551814	28551945	True	NM_138414,NM_001042483,NM_012385	chr16,chr16,chr16	+,-,-	CCDC101,NUPR1,NUPR1	13303,-1319,-1319
chr17:25372622-25373586	chr17	+	25372849	25373427	True	NM_015626,NM_000625	chr17,chr17	+,-	WSB1,NOS2	247678,754186
chr16:48720107-48721463	chr16	+	48720256	48721500	True	NM_153029,NM_031490	chr16,chr16	-,+	N4BP1,LONP2	-76136,-442096
chr8:12815541-12816439	chr8	+	12815697	12816229	True	NM_020844,NR_015383	chr8,chr8	+,-	KIAA1456,LOC340357	-12572,-146787
chr8:17243397-17244545	chr8	+	17243465	17244505	True	NM_001008539,NM_004686	chr8,chr8	+,-	SLC7A2,MTMR7	110091,26585
chr4:178363564-178364033	chr4	+	178363714	178364051	True	NR_033655,NM_000027,NM_018248,NM_001171988	chr4,chr4,chr4,chr4	-,-,+,-	AGA,AGA,NEIL3,AGA	-57,-57,-132774,-57
chr17:28257088-28257332	chr17	+	28257161	28257361	True	NM_033389,NM_001145053	chr17,chr17	-,+	SSH2,EFCAB5	-143,-338
chr7:2672927-2673390	chr7	+	2672954	2673390	True	NM_152743,NM_025250	chr7,chr7	-,+	BRAT1,TTYH3	-77562,-1402
chr15:45701962-45703322	chr15	+	45702201	45702841	True	NM_001482,NM_024063,NR_027635	chr15,chr15,chr15	-,+,+	GATM,SPATA5L1,SPATA5L1	-31221,-7744,-7744
chr7:23726859-23727754	chr7	+	23726913	23727608	True	NM_199136,NR_002711,NM_001127364,NM_001127365	chr7,chr7,chr7,chr7	+,-,+,+	C7orf46,CLK2P,C7orf46,C7orf46	-7219,-100767,-7219,-7219
chr2:122285096-122285889	chr2	+	122285147	122285594	True	NR_023343,NM_001142273	chr2,chr2	+,-	RNU4ATAC,CLASP1	2861,121508
chr8:65643678-65644347	chr8	+	65643687	65644361	True	NM_152414,NM_004820	chr8,chr8	+,-	BHLHE22,CYP7B1	-150943,67037
chr17:16749643-16750504	chr17	+	16749733	16750541	True	NR_026810,NR_029392	chr17,chr17	+,-	FAM106C,KRT16P2	-57727,-13586
chr17:16749643-16750504	chr17	-	18328819	18328869	False	NM_148918,NR_001443	chr17,chr17	-,+	SHMT1,LOC339240	-61963,-3375
chr17:16749643-16750504	chr17	+	20422163	20422213	False	NM_001190790,NR_029393	chr17,chr17	+,-	CDRT15L2,KRT16P3	60823,-14352
chr4:49316770-49317098	chr4	+	49316795	49316849	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-328581,-407980
chr4:49316770-49317098	chr4	+	49322950	49323004	False	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-334736,-414135
chr17:7491322-7492007	chr17	+	7491460	7491918	True	NM_001251,NM_001040059,NM_004870,NM_006942,NR_024603	chr17,chr17,chr17,chr17,chr17	+,+,+,-,+	CD68,CD68,MPDU1,SOX15,MPDU1	-8713,-8712,-4553,1620,-4553
chr19:7701352-7701665	chr19	+	7701414	7701702	True	NM_006949,NR_033242,NM_020196,NM_174895,NM_001127396,NM_001171155	chr19,chr19,chr19,chr19,chr19,chr19	+,+,-,-,+,+	STXBP2,LOC100131801,XAB2,PCP2,STXBP2,LOC100131801	288,-6794,-6975,-2844,288,-6794
chr13:114106643-114107513	chr13	+	114106697	114107437	True	NM_017905,NM_138430,NM_199162	chr13,chr13,chr13	+,-,-	TMCO3,ADPRHL1,ADPRHL1	37870,452,-3240
chr3:48470012-48470233	chr3	+	48470039	48470205	True	NM_002673,NM_015933,NM_001130082	chr3,chr3,chr3	-,+,-	PLXNB1,CCDC72,PLXNB1	717,11480,1305
chr2:238392942-238393425	chr2	+	238392950	238393285	True	NM_001042467,NM_024101,NM_057165	chr2,chr2,chr2	+,+,-	MLPH,MLPH,COL6A3	2592,2592,-70100
chr2:219903753-219905589	chr2	+	219903806	219905275	True	NM_194302,NM_152389,NR_024385	chr2,chr2,chr2	-,-,+	CCDC108,CCDC108,LOC151300	1020,1020,-62851
chr5:118788541-118789037	chr5	+	118788623	118789065	True	NM_173666,NM_000414,NM_001199292,NM_001199291	chr5,chr5,chr5,chr5	-,+,+,+	DTWD2,HSD17B4,HSD17B4,HSD17B4	-464383,-539,-539,-475
chr20:45986681-45987261	chr20	+	45986956	45987278	True	NM_183048,NR_024594,NM_012408,NM_183047	chr20,chr20,chr20,chr20	-,+,-,-	ZMYND8,LOC100131496,ZMYND8,ZMYND8	-1482,-39768,-1482,-1482
chr2:224565732-224567241	chr2	+	224565988	224566978	True	NM_022915,NM_003469	chr2,chr2	+,-	MRPL44,SCG2	255142,-98771
chrX:134350559-134351379	chrX	+	134350631	134351244	True	NM_017863,NM_152695	chrX,chrX	-,+	CXorf48,ZNF449	-44880,127451
chrX:134350559-134351379	chrX	-	134289155	134289768	False	NM_001031705,NM_001078171	chrX,chrX	-,+	CXorf48,FAM127A	16033,-122874
chr7:66370328-66370741	chr7	+	66370336	66370762	True	NR_003934,NM_017994	chr7,chr7	-,+	LOC729156,C7orf42	-60523,15440
chr9:114246752-114247329	chr9	+	114246844	114247280	True	NM_001080398,NM_133464	chr9,chr9	-,+	KIAA0368,ZNF483	41,40166
chr17:3373899-3374303	chr17	+	3374059	3374171	True	NM_001170696,NM_001170697,NM_001170695,NM_001170698,NM_001170699,NM_000049,NM_032598,NM_001128085	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,+,-,+	SPATA22,SPATA22,SPATA22,SPATA22,SPATA22,ASPA,SPATA22,ASPA	1021,1005,1021,978,946,5124,920,3232
chr19:53287362-53288138	chr19	+	53287763	53288149	True	NM_198457,NR_023311	chr19,chr19	-,+	ZNF600,ZNF137P	1935,-187884
chr15:64457636-64459225	chr15	+	64457827	64459174	True	NM_024798,NM_000942	chr15,chr15	+,-	SNX22,PPIB	-13970,-2473
chrX:48395735-48396198	chrX	+	48395747	48395937	True	NM_033518,NM_002536	chrX,chrX	-,+	SLC38A5,TBC1D25	-67103,2137
chr9:71628808-71629121	chr9	+	71628853	71628991	True	NM_000144,NM_002732	chr9,chr9	+,-	FXN,PRKACG	21487,98
chr12:64217660-64218159	chr12	+	64217660	64218128	True	NM_020762,NM_173812	chr12,chr12	+,-	SRGAP1,DPY19L2	20412,-155306
chr17:61561889-61562477	chr17	+	61561969	61562525	True	NM_152830,NM_001915,NM_000789,NM_001178057	chr17,chr17,chr17,chr17	+,-,+,+	ACE,CYB561,ACE,ACE	-14,-38247,-7598,-14
chr8:18067414-18067672	chr8	+	18067599	18067707	True	NM_001160176,NM_001160175,NM_001160172,NM_001160173,NM_001160170,NM_001160171,NM_000662,NM_004315	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	+,+,+,+,+,+,+,-	NAT1,NAT1,NAT1,NAT1,NAT1,NAT1,NAT1,ASAH1	-32,-32,-32,-32,-32,-32,-32,-125092
chr17:3795434-3795690	chr17	+	3795448	3795666	True	NM_172207,NM_172206,NM_032294,NM_031965	chr17,chr17,chr17,chr17	-,-,-,+	CAMKK1,CAMKK1,CAMKK1,GSG2	721,-1411,721,-168302
chr18:9132243-9132594	chr18	+	9132265	9132516	True	NM_001204056,NM_001083625,NM_001042388,NM_015208	chr18,chr18,chr18,chr18	+,+,-,+	ANKRD12,ANKRD12,PPP4R1,ANKRD12	5044,4234,482137,4234
chr10:27754395-27755014	chr10	+	27754775	27755059	True	NM_021252,NM_001034842	chr10,chr10	+,-	RAB18,PTCHD3	38189,-51478
chr1:179262182-179262714	chr1	+	179262394	179262744	True	NM_001136001,NM_003101	chr1,chr1	-,+	ABL2,SOAT1	-63575,272
chr7:104563822-104564603	chr7	+	104563870	104564645	True	NM_018682,NR_027374	chr7,chr7	+,-	MLL5,LOC723809	89991,2497
chr4:86703080-86705023	chr4	+	86703615	86705069	True	NM_001042669,NM_138981	chr4,chr4	+,-	ARHGAP24,MAPK10	-3825,323793
chr8:30013794-30014189	chr8	+	30013828	30014022	True	NM_006571,NM_001100916	chr8,chr8	+,-	DCTN6,MBOAT4	-66,-11628
chr3:170626631-170627037	chr3	+	170626699	170626983	True	NM_020390,NM_001185056	chr3,chr3	-,+	EIF5A2,CLDN11	-273,-487722
chr19:39440947-39441590	chr19	+	39441181	39441356	True	NM_148169,NM_033363	chr19,chr19	-,+	FBXO17,MRPS12	2026,-19638
chr12:121649636-121650474	chr12	+	121649785	121650074	True	NM_002560,NM_172226	chr12,chr12	+,-	P2RX4,CAMKK2	-2172,84532
chr1:154527801-154529770	chr1	+	154527961	154529786	True	NM_000748,NM_017582	chr1,chr1	+,-	CHRNB2,UBE2Q1	10470,1384
chr15:40695814-40696380	chr15	+	40695913	40696263	True	NM_207380,NM_002225,NM_001159508	chr15,chr15,chr15	-,+,+	C15orf52,IVD,IVD	-62745,1422,1422
chr16:88520642-88520918	chr16	+	88520786	88520916	True	NM_000101,NM_153813	chr16,chr16	-,+	CYBA,ZFPM1	196591,-823
chr15:67417858-67418695	chr15	+	67417864	67418561	True	NM_001145102,NM_024666	chr15,chr15	+,-	SMAD3,AAGAB	87,128563
chr19:11040171-11040571	chr19	+	11040198	11040580	True	NM_024029,NM_138358	chr19,chr19	-,+	YIPF2,C19orf52	-841,-825
chr12:57029942-57030300	chr12	+	57030018	57030296	True	NR_003046,NM_001686,NM_002898,NM_013449,NR_002737	chr12,chr12,chr12,chr12,chr12	-,-,+,-,-	SNORD59B,ATP5B,RBMS2,BAZ2A,SNORD59A	7292,9606,-114460,81,8639
chr8:88886683-88887193	chr8	+	88886841	88886999	True	NM_152418,NM_173538	chr8,chr8	-,+	DCAF4L2,CNBD1	-545,-1008224
chr2:167997118-167998779	chr2	+	167997348	167998628	True	NM_002976,NM_001199144	chr2,chr2	-,+	SCN7A,XIRP2	-653870,45164
chr22:41985112-41985316	chr22	+	41985112	41985314	True	NM_014460,NM_002676	chr22,chr22	+,-	CSDC2,PMM1	-28149,607
chr6:70990911-70991127	chr6	+	70991061	70991123	True	NM_078485,NM_001105531	chr6,chr6	-,+	COL9A1,FAM135A	1838,131983
chr16:8806010-8806593	chr16	+	8806215	8806615	True	NM_001127448,NM_000663,NM_015421	chr16,chr16,chr16	+,+,-	ABAT,ABAT,TMEM186	7957,210,84940
chr3:44494945-44496705	chr3	+	44495265	44496415	True	NM_018651,NM_181489	chr3,chr3	+,-	ZNF167,ZNF445	100297,22797
chr15:56259176-56259947	chr15	+	56259498	56259974	True	NM_198524,NM_006154	chr15,chr15	+,-	TEX9,NEDD4	397669,25924
chr3:126195580-126197131	chr3	+	126195651	126196714	True	NM_001040653,NM_025112,NM_152889	chr3,chr3,chr3	-,-,+	ZXDC,ZXDC,CHST13	-889,-889,46461
chr10:35894205-35895064	chr10	+	35894210	35894796	True	NM_153368,NM_031866	chr10,chr10	+,-	GJD4,FZD8	5,35616
chr2:240116127-240116903	chr2	+	240116197	240116949	True	NR_036229,NR_026664	chr2,chr2	+,-	MIR4269,MGC16025	110207,254
chr17:42582366-42583645	chr17	+	42582532	42583567	True	NM_001466,NM_001002909,NR_036474	chr17,chr17,chr17	+,-,-	FZD2,GPATCH8,GPATCH8	51244,-1575,-1575
chr10:127462984-127463247	chr10	+	127463048	127463218	True	NM_147191,NM_078468	chr10,chr10	-,+	MMP21,BCCIP	1222,48885
chr11:79152184-79152986	chr11	+	79152286	79152906	True	NM_001098816,NM_020798	chr11,chr11	-,+	ODZ4,USP35	-591,-1252479
chr1:6547682-6548524	chr1	+	6547704	6548319	True	NM_001042665,NM_001042664,NM_020631,NM_001042663,NM_031475	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	PLEKHG5,PLEKHG5,PLEKHG5,PLEKHG5,ESPN	-1690,2371,3491,9215,-62907
chr18:47813628-47813854	chr18	+	47813651	47813863	True	NM_001204137,NM_001204138,NM_001204139,NM_015844,NM_015847,NM_015846,NM_001204140,NM_001204141,NM_001101654,NM_001204136,NM_001204151,NM_001039535,NM_001204143,NM_015845,NM_002384,NM_001204142,NM_014593	chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18	-,-,-,-,-,-,-,-,-,-,-,+,-,-,-,-,-	MBD1,MBD1,MBD1,MBD1,MBD1,MBD1,MBD1,MBD1,CXXC1,MBD1,MBD1,SKA1,MBD1,MBD1,MBD1,MBD1,CXXC1	-5507,-5507,-5507,-5507,-5507,-5507,-5507,-5507,879,-5507,-7264,87528,-5514,-5507,-5507,-5507,879
chr18:76737611-76738065	chr18	+	76737640	76737968	True	NM_001146343,NM_171999	chr18,chr18	-,+	PQLC1,SALL3	973736,2306
chr19:17375521-17376476	chr19	+	17375728	17376190	True	NM_001033549,NM_031941,NM_014173	chr19,chr19,chr19	+,-,+	BABAM1,USHBP1,BABAM1	2041,-184,2041
chr3:197272420-197273348	chr3	+	197272432	197273369	True	NM_203314,NM_004051,NM_001011537	chr3,chr3,chr3	-,-,+	BDH1,BDH1,FYTTD1	9539,9539,203054
chr17:45106466-45107154	chr17	+	45106855	45106939	True	NM_203400,NM_054022	chr17,chr17	-,+	RPRML,GOSR2	-50241,-106427
chr17:44668932-44670335	chr17_ctg5_hap1	-	378384	379601	False	NM_001113738,NR_033799,NM_006178	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	+,-,-	ARL17A,NSFP1,NSF	11981,1009,1071
chr17:44668932-44670335	chr17_ctg5_hap1	+	1525864	1527081	False	NM_016632	chr17_ctg5_hap1	-	ARL17A	-11980
chr17:44668932-44670335	chr17	+	44669051	44670268	True	NM_001113738,NR_033799,NM_006178	chr17,chr17,chr17	-,+,+	ARL17A,NSFP1,NSF	-11963,-1009,-1071
chr17:44668932-44670335	chr17	+	44451130	44452347	False	NM_001113738,NR_033799	chr17,chr17	-,+	ARL17A,NSFP1	-11967,-1009
chr1:157738456-157739510	chr1	+	157738485	157739107	True	NM_030764,NM_018240	chr1,chr1	-,+	FCRL2,KIRREL	7865,223955
chr8:145136980-145137181	chr8	+	145137026	145137192	True	NM_019037,NM_017570,NM_003801	chr8,chr8,chr8	+,-,+	EXOSC4,OPLAH,GPAA1	-3555,-21442,331
chr5:140800059-140800874	chr5	+	140800211	140800777	True	NM_032091,NM_032090,NM_018927,NM_032092,NM_032094,NM_032101,NM_005642,NM_018914,NM_018913,NM_003735,NR_001297	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,-,+,+,+,+	PCDHGA11,PCDHGA10,PCDHGB7,PCDHGA11,PCDHGA12,PCDHGB7,TAF7,PCDHGA11,PCDHGA10,PCDHGA12,PCDHGB8P	-27,-7525,-3008,-27,9380,-3054,-99860,-27,-7525,9380,5075
chr3:128879183-128879500	chr3	+	128879241	128879545	True	NM_001199469,NM_001204890,NM_016128,NM_020701	chr3,chr3,chr3,chr3	-,-,+,-	ISY1,ISY1-RAB43,COPG,ISY1	578,578,88907,578
chr5:68463039-68463822	chr5	+	68463102	68463798	True	NM_176816,NM_031966	chr5,chr5	-,+	CCDC125,CCNB1	152662,-240
chr16:66877294-66878194	chr16	+	66877304	66878073	True	NM_001014435,NM_005182,NM_003905	chr16,chr16,chr16	+,+,-	CA7,CA7,NAE1	767,208,-12425
chr1:46943906-46944827	chr1	+	46943908	46944764	True	NM_147192,NM_001097611	chr1,chr1	+,-	DMBX1,KNCN	27903,72173
chr10:48390076-48390367	chr10	+	48390106	48390406	True	NM_002900,NM_153034	chr10,chr10	-,+	RBP3,ZNF488	635,-35068
chr10:100994076-100994379	chr10	+	100994110	100994416	True	NM_021828,NM_001166246,NM_020348,NM_001166244,NM_001166245	chr10,chr10,chr10,chr10,chr10	-,-,+,-,-	HPSE2,HPSE2,CNNM1,HPSE2,HPSE2	1266,1266,94439,1266,1266
chr16:30200168-30201121	chr16	+	30200373	30200805	True	NM_177552,NR_037608,NR_037609,NM_001017390,NM_001014999,NM_007074,NM_001015000,NM_024044,NM_001031827,NR_002454,NM_001039182,NM_178044,NM_001193333	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,+,+,+,-,+,-,+,+	SULT1A3,SLX1A-SULT1A3,SLX1B-SULT1A4,SULT1A4,SLX1A,CORO1A,SLX1A,SLX1B,BOLA2,LOC606724,BOLA2B,SLX1B,CORO1A	9743,4948,4948,9743,4358,-5693,4358,4358,4878,-419,4878,4358,-5693
chr16:30200168-30201121	chr16	+	29461034	29461466	False	NM_177552,NR_037608,NR_037609,NM_001017390,NM_001014999,NM_001015000,NM_024044,NM_001031827,NR_002454,NM_001039182,NM_178044	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,+,+,-,+,-,+	SULT1A3,SLX1A-SULT1A3,SLX1B-SULT1A4,SULT1A4,SLX1A,SLX1A,SLX1B,BOLA2,LOC606724,BOLA2B,SLX1B	9740,4945,4945,9740,4355,4355,4355,4875,-419,4875,4355
chr7:91510312-91510991	chr7	+	91510364	91510994	True	NM_006980,NM_005751	chr7,chr7	-,+	MTERF,AKAP9	-348,59194
chrX:193017-193309	chrY	+	143024	143342	False	NR_028057,NM_018390,NM_012227	chrY,chrY,chrY	+,+,-	PLCXD1,PLCXD1,GTPBP6	-84,4718,37595
chrX:193017-193309	chrX	+	193024	193342	True	NR_028057,NM_018390,NM_012227	chrX,chrX,chrX	+,+,-	PLCXD1,PLCXD1,GTPBP6	-84,4718,37595
chr16:477588-478023	chr16	+	477672	477830	True	NM_014700,NM_021259	chr16,chr16	+,-	RAB11FIP3,TMEM8A	-2062,-45722
chr5:63258756-63259051	chr5	+	63258757	63259085	True	NM_000524,NM_178532	chr5,chr5	-,+	HTR1A,RNF180	-1211,202585
chr17:30229156-30230975	chr17	+	30229589	30230653	True	NM_015355,NM_018428	chr17,chr17	+,-	SUZ12,UTP6	33390,-860
chr6:150184170-150184519	chr6	+	150184187	150184495	True	NM_025217,NM_032832	chr6,chr6	+,-	ULBP2,LRP11	78640,1035
chr9:103190192-103190856	chr9	+	103190307	103190560	True	NM_001198806,NM_001198805,NM_017746,NM_001198807,NM_080655	chr9,chr9,chr9,chr9,chr9	+,+,-,+,+	C9orf30,C9orf30,TEX10,C9orf30,C9orf30	1235,-648,-75048,-864,-864
chr6:13486746-13487111	chr6	+	13486749	13487095	True	NM_033069,NM_018988,NM_031244	chr6,chr6,chr6	-,-,+	C6orf114,GFOD1,SIRT5	-334,742,87696
chr4:57771723-57773306	chr4	+	57772107	57773315	True	NM_032313,NM_001193508,NM_005612	chr4,chr4,chr4	-,+,+	C4orf14,REST,REST	70561,1763,726
chr20:48098749-48099010	chr20	+	48098753	48098957	True	NM_004975,NR_003030	chr20,chr20	-,+	KCNB1,SNORD12	274,-201584
chr17:5184703-5185266	chr17	+	5184892	5185182	True	NM_207103,NM_004703,NM_001083585	chr17,chr17,chr17	-,+,+	C17orf87,RABEP1,RABEP1	-46809,375,375
chr11:70933078-70933579	chr11	+	70933305	70933533	True	NM_018161,NM_012309	chr11,chr11	+,-	NADSYN1,SHANK2	230683,2325
chr20:62495447-62495967	chr20	+	62495447	62495805	True	NM_080622,NM_025224,NM_199359,NM_003288,NM_199363,NM_199362,NM_199361,NM_199360	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,-,+,+,+,+,+,+	ABHD16B,ZBTB46,TPD52L2,TPD52L2,TPD52L2,TPD52L2,TPD52L2,TPD52L2	-2932,-58591,784,784,784,784,784,784
chr4:159091968-159092172	chr4	+	159091982	159092214	True	NM_001128424,NM_016613,NM_001031700,NM_018342	chr4,chr4,chr4,chr4	-,-,-,+	FAM198B,FAM198B,FAM198B,TMEM144	2038,1554,2038,39186
chr7:140302077-140303008	chr7	+	140302151	140302713	True	NM_015689,NM_052853	chr7,chr7	-,+	DENND2A,ADCK2	-17,70239
chr8:8239717-8240659	chr8	+	8239840	8240662	True	NR_024361,NM_001080826	chr8,chr8	+,-	FLJ10661,SGK223	-153799,-583
chr4:8175856-8176477	chr4	+	8176082	8176466	True	NM_001130088,NM_018986	chr4,chr4	-,+	ABLIM2,SH3TC1	-15523,24593
chrX:100331495-100332361	chrX	+	100332113	100332235	True	NM_021637,NM_024917	chrX,chrX	+,-	TMEM35,TRMT2B	1600,-25008
chr21:30562273-30563150	chr21	+	30562498	30563195	True	NM_006585,NR_027072	chr21,chr21	-,+	CCT8,NCRNA00189	-116488,2605
chr2:138737115-138737494	chr2	+	138737168	138737512	True	NM_007226,NM_006895	chr2,chr2	-,+	NXPH2,HNMT	800349,-15421
chr2:224588632-224590244	chr2	+	224588757	224590251	True	NM_022915,NM_001039569	chr2,chr2	+,-	MRPL44,AP1S3	231869,112118
chr16:73083080-73083610	chr16	+	73083118	73083594	True	NM_006885,NM_001164766,NR_027756	chr16,chr16,chr16	-,-,+	ZFHX3,ZFHX3,HTA	-844,8990,42653
chr2:171570885-171571091	chr2	+	171570940	171571084	True	NM_001003845,NR_027433	chr2,chr2	+,-	SP5,LOC440925	772,43
chr4:144106524-144106740	chr4	+	144106584	144106750	True	NM_032557,NM_003866	chr4,chr4	+,-	USP38,INPP4B	-565,-338980
chr11:16755428-16756774	chr11	+	16755725	16756805	True	NM_014267,NM_033326	chr11,chr11	+,-	C11orf58,SOX6	3342,-257790
chr2:71124706-71124934	chr2	+	71124811	71124935	True	NM_015717,NM_012476	chr2,chr2	-,+	CD207,VAX2	-61858,2784
chr1:20250240-20250522	chr1	+	20250290	20250544	True	NM_015207,NM_014589	chr1,chr1	+,-	OTUD3,PLA2G2E	-41453,-180
chr21:45288566-45290314	chr21	+	45288605	45290248	True	NR_026961,NM_020132	chr21,chr21	-,+	LOC284837,AGPAT3	-56157,-3553
chr22:23329264-23329531	chr22	+	23329300	23329476	True	NM_002073,NM_014433	chr22,chr22	+,-	GNAZ,RTDR1	83192,154815
chr5:74330455-74331469	chr5	+	74330472	74331371	True	NM_014886,NM_016591	chr5,chr5	+,-	NSA2,GCNT4	-267420,-3748
chr16:33140611-33140862	chr16	+	33140649	33140755	True	NR_033866,NM_016212	chr16,chr16	-,+	LOC390705,TP53TG3	157997,64224
chr16:33140611-33140862	chr16	+	32199666	32199772	False	NR_002827,NM_003414	chr16,chr16	-,+	HERC2P4,ZNF267	-35792,-314638
chr16:33140611-33140862	chr16	-	32752296	32752402	False	NM_016212	chr16	-	TP53TG3	-64243
chr9:125136012-125137514	chr9	+	125136551	125137317	True	NM_080591,NM_001004451,NM_000962	chr9,chr9,chr9	+,-,+	PTGS1,OR1J1,PTGS1	-3373,102938,-3373
chr22:30865477-30866050	chr22	+	30865476	30866072	True	NM_174975,NM_016498	chr22,chr22	-,+	SEC14L3,MTFP1	2012,-43916
chr19:3626862-3627192	chr19	+	3626916	3627168	True	NM_021231,NM_001080543,NM_133261	chr19,chr19,chr19	-,-,+	C19orf29,C19orf29,GIPC3	-103,-103,-41398
chr21:47877298-47878173	chr21	+	47877442	47878032	True	NM_206889,NM_001146114,NM_001146115,NM_001146116,NM_206890,NM_206891,NM_015151,NM_058180	chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21	+,+,+,+,+,+,+,-	DIP2A,DIP2A,DIP2A,DIP2A,DIP2A,DIP2A,DIP2A,C21orf58	829,829,829,829,829,829,829,-133657
chr1:20911794-20913625	chr1	+	20911873	20913547	True	NM_001785,NM_005216	chr1,chr1	+,-	CDA,DDOST	1896,74540
chr18:19996643-19997962	chr18	+	19997243	19997955	True	NM_172241,NM_005257	chr18,chr18	-,+	CTAGE1,GATA6	-27,-247886
chr12:57871155-57872893	chr12	+	57871272	57872894	True	NM_032496,NM_004990,NM_001080157,NM_001080156	chr12,chr12,chr12,chr12	-,+,-,-	ARHGAP9,MARS,ARHGAP9,ARHGAP9	789,8841,580,-156
chr11:46407678-46409506	chr11	+	46407700	46409128	True	NM_000741,NM_002391,NM_001012334,NM_001012333	chr11,chr11,chr11,chr11	-,+,+,+	CHRM4,MDK,MDK,MDK	105,-4532,-5133,-4448
chr19:39906587-39906844	chr19	+	39906638	39906816	True	NM_003407,NM_001020,NM_022835	chr19,chr19,chr19	+,-,+	ZFP36,RPS16,PLEKHG2	-9202,19852,-2939
chr4:291307-292187	chr4	+	291585	292207	True	NM_001137608,NM_003441	chr4,chr4	-,+	ZNF732,ZNF141	-1641,39388
chr5:94730104-94731069	chr5	+	94730174	94730795	True	NM_024717,NM_152548	chr5,chr5	-,+	MCTP1,FAM81B	-109895,-3177
chr13:52371621-52371976	chr13	+	52371638	52371932	True	NM_031290,NM_001031719,NM_024705	chr13,chr13,chr13	+,-,-	CCDC70,DHRS12,DHRS12	64184,6352,6411
chrX:102531585-102531849	chrX	+	102531629	102531761	True	NM_152278,NM_001012979	chrX,chrX	+,-	TCEAL7,TCEAL5	53352,86
chr22:44208081-44208286	chr22	+	44208127	44208323	True	NM_025225,NM_198856,NM_022785	chr22,chr22,chr22	+,-,-	PNPLA3,EFCAB6,EFCAB6	111295,14,14
chr17:61987719-61988276	chr17	+	61987842	61988222	True	NM_001318,NM_022579,NM_022581,NM_000515,NM_022560,NM_022580,NM_022562,NM_022561,NR_002947,NM_022559	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,-,-,-,+,-	CSHL1,CSHL1,CSHL1,GH1,GH1,CSHL1,GH1,GH1,TCAM1P,GH1	446,446,446,8026,8026,446,8026,8026,-53517,8026
chr1:160131425-160131959	chr1	+	160131507	160131982	True	NM_144699,NM_052868	chr1,chr1	+,-	ATP1A4,IGSF8	-10206,-63099
chr10:75757666-75757898	chr10	+	75757741	75757805	True	NM_003373,NM_001001791,NM_014000	chr10,chr10,chr10	+,-,+	VCL,C10orf55,VCL	66,-75206,66
chr2:33356955-33357772	chr2	+	33356958	33357788	True	NM_001166264,NM_001166265,NM_001166266,NM_000627,NM_015475	chr2,chr2,chr2,chr2,chr2	+,+,+,+,-	LTBP1,LTBP1,LTBP1,LTBP1,FAM98A	1875,1875,1875,1875,466624
chr5:149735331-149736761	chr5	+	149735332	149736808	True	NM_001135244,NM_001135243,NM_001195141,NM_001135245,NM_000356,NM_001012301,NM_001008657	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,-,+	TCOF1,TCOF1,TCOF1,TCOF1,TCOF1,ARSI,TCOF1	393,393,393,393,393,-52807,393
chr1:211998842-211999354	chr1	+	211998852	211999007	True	NM_016448,NM_014873	chr1,chr1	+,-	DTL,LPGAT1	209911,5168
chr2:131114292-131115149	chr2	+	131114394	131114971	True	NM_032357,NM_001142370,NM_014369	chr2,chr2,chr2	-,+,+	CCDC115,PTPN18,PTPN18	-14472,-866,-866
chr14:24395907-24396954	chr14	+	24395975	24396996	True	NR_024081,NM_021004	chr14,chr14	-,+	C14orf165,DHRS4	6838,25968
chr17:260208-260455	chr17	+	260348	260492	True	NM_182705,NM_001013672	chr17,chr17	-,+	FAM101B,C17orf97	35289,-281
chr12:116997752-116998844	chr12	+	116997765	116998556	True	NM_001085481,NM_024738	chr12,chr12	+,-	MAP1LC3B2,C12orf49	-630,177337
chr22:21054817-21055259	chr22	+	21054862	21055047	True	NM_002650,NR_026815	chr22,chr22	-,+	PI4KA,TMEM191A	33966,354
chr11:75914872-75916519	chr11	+	75915105	75916234	True	NM_004626,NM_020193	chr11,chr11	-,+	WNT11,C11orf30	1390,239834
chr16:31367384-31367881	chr16	+	31367415	31367809	True	NM_000887,NM_005205	chr16,chr16	+,-	ITGAX,COX6A2	-957,71991
chr7:20246517-20248382	chr7	+	20246524	20248115	True	NM_182762,NM_002214	chr7,chr7	-,+	MACC1,ITGB8	8955,122609
chr16:48396564-48398144	chr16	+	48396664	48397853	True	NM_001006610,NM_031490	chr16,chr16	-,+	SIAH1,LONP2	1990,-118504
chr11:5707041-5708130	chr11	+	5707212	5707749	True	NM_033092,NM_033093,NM_033034,NM_006074,NM_001199573	chr11,chr11,chr11,chr11,chr11	-,-,-,+,+	TRIM5,TRIM5,TRIM5,TRIM22,TRIM22	-873,-873,-873,3067,3067
chr10:14916637-14918538	chr10	+	14916654	14918480	True	NM_001029954,NR_034181,NM_024670,NM_001193426,NM_001193427,NM_001193424,NM_001193425	chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,+,+,+,+,+,+	CDNF,SUV39H2,SUV39H2,SUV39H2,SUV39H2,SUV39H2,SUV39H2	-36671,2301,2418,2301,2384,2301,2384
chr5:132387010-132387241	chr5	+	132387068	132387236	True	NM_017665,NM_002154	chr5,chr5	-,+	ZCCHC10,HSPA4	-24828,425
chr15:90296193-90296927	chr15	+	90296357	90296750	True	NM_018670,NM_001039958	chr15,chr15	-,+	MESP1,MESP2	-1817,22838
chr22:24310619-24311746	chr22	+	24310769	24311783	True	NM_000854,NM_001080843,NM_001084393,NM_001084392	chr22,chr22,chr22,chr22	-,-,+,-	GSTT2,GSTT2B,DDTL,DDT	-7376,-7401,-1794,4947
chr22:24310619-24311746	chr22	-	24314424	24314936	False	NM_001355,NM_001084393,NM_001084392,NM_000854	chr22,chr22,chr22,chr22	-,+,-,+	DDT,DDTL,DDT,GSTT2	7133,-5449,1794,7377
chrX:72804315-72805989	chrX	+	72804368	72806019	True	NR_029423,NM_001039840	chrX,chrX	-,+	LOC139201,CHIC1	-21447,-21442
chr22:20852748-20853445	chr22	+	20853073	20853458	True	NM_001003891,NR_033825,NM_015889,NM_032775	chr22,chr22,chr22,chr22	+,-,+,-	MED15,KLHL22,MED15,KLHL22	8427,-2903,8427,-2903
chr20:50422391-50423364	chr20	+	50422431	50422925	True	NM_020436,NM_014484	chr20,chr20	-,+	SALL4,MOCS3	-3383,-847119
chr5:159436181-159437187	chr5	+	159436344	159437095	True	NM_003314,NM_052927	chr5,chr5	+,-	TTC1,PWWP2A	-215,109408
chr3:121782536-121782742	chr3	+	121782689	121782787	True	NM_175862,NM_001199799	chr3,chr3	+,-	CD86,ILDR1	-8523,-41562
chr9:111616245-111617062	chr9	+	111616260	111616870	True	NM_006687,NM_006686	chr9,chr9	+,-	ACTL7A,ACTL7B	7732,1455
chr6:10415595-10415799	chr6	+	10415602	10415820	True	NM_001042425,NM_001032280,NR_033910,NM_003220	chr6,chr6,chr6,chr6	-,-,+,-	TFAP2A,TFAP2A,LOC100130275,TFAP2A	4027,-2995,-3102,-132
chr4:47959041-47960002	chr4	+	47959241	47959903	True	NM_001142564,NM_207330	chr4,chr4	-,+	CNGA1,NIPAL1	23711,58887
chr1:107690734-107691368	chr1	+	107690761	107691395	True	NM_001113226,NM_001113228,NM_001079874,NM_014917	chr1,chr1,chr1,chr1	+,+,-,+	NTNG1,NTNG1,VAV3,NTNG1	-8183,-8183,539781,-8067
chr1:43751565-43751814	chr1	+	43751569	43751857	True	NM_005424,NM_182517,NM_001164829	chr1,chr1,chr1	+,-,-	TIE1,C1orf210,C1orf210	14806,-319,-281
chr19:7504062-7504961	chr19	+	7504383	7504953	True	NR_024491,NM_001130955	chr19,chr19	-,+	LOC100128573,ARHGEF18	33344,26
chr6:167040932-167041138	chr6	+	167040943	167041169	True	NM_021135,NM_007045	chr6,chr6	-,+	RPS6KA2,FGFR1OP	-217,371646
chr3:138158251-138158599	chr3	+	138158282	138158638	True	NM_031913,NM_178130	chr3,chr3	+,-	ESYT3,TXNDC6	-4918,-109554
chr3:73671873-73673037	chr3	+	73672046	73673080	True	NM_018029,NM_015009	chr3,chr3	+,-	EBLN2,PDZRN3	-561287,1042
chr2:145042478-145043361	chr2	+	145042757	145043407	True	NM_001006636,NR_033870	chr2,chr2	-,+	GTDC1,DKFZp686O1327	8715,382126
chr2:220296431-220297503	chr2	+	220296659	220297251	True	NM_012100,NM_005876	chr2,chr2	-,+	DNPEP,SPEG	-43997,2448
chr9:86571941-86572809	chr9	+	86572095	86572719	True	NM_024945,NM_032307	chr9,chr9	+,-	RMI1,C9orf64	22917,-432
chr11:62185611-62186619	chr11	+	62185659	62186523	True	NM_003357,NM_206998	chr11,chr11	+,-	SCGB1A1,SCGB1D4	-17,-119123
chr16:418981-419305	chr16	+	419061	419273	True	NM_006428,NR_024453	chr16,chr16	-,+	MRPL28,LOC100134368	1346,12967
chr3:50650119-50650817	chr3	+	50650174	50650816	True	NM_013324,NM_145071,NM_004635	chr3,chr3,chr3	-,-,+	CISH,CISH,MAPKAPK3	-912,-912,3784
chr2:233876258-233877381	chr2	+	233876907	233877341	True	NM_005383,NM_019850	chr2,chr2	+,-	NEU2,NGEF	20040,660
chr18:813025-813286	chr18	+	813069	813277	True	NM_001099733,NM_005433	chr18,chr18	+,-	ADCYAP1,YES1	91666,-742
chr20:18269598-18269856	chr20	+	18269733	18269807	True	NM_003434,NM_001083330,NM_001099407	chr20,chr20,chr20	+,+,-	ZNF133,ZNF133,C20orf12	-663,-663,178072
chr1:17906340-17906587	chr1	+	17906431	17906635	True	NM_018715,NM_001011722	chr1,chr1	-,+	RCC2,ARHGEF10L	-140211,412
chr20:55098681-55099105	chr20	+	55098819	55099007	True	NM_001012971,NM_080615,NM_001013646	chr20,chr20,chr20	+,-,+	C20orf106,GCNT7,C20orf107	777,2024,9294
chr18:33710878-33711499	chr18	+	33711281	33711547	True	NM_012319,NM_018255,NM_001099406	chr18,chr18,chr18	-,+,-	SLC39A6,ELP2,SLC39A6	-1924,-1446,-1924
chr11:66247410-66247645	chr11	+	66247453	66247667	True	NM_170739,NM_130443,NM_005700	chr11,chr11,chr11	-,+,+	MRPL11,DPP3,DPP3	-41143,212,212
chr5:149673173-149674245	chr5	+	149673192	149673936	True	NM_001008657,NM_171825,NM_015981,NM_001012301	chr5,chr5,chr5,chr5	+,-,-,-	TCOF1,CAMK2A,CAMK2A,ARSI	63265,-3789,-3789,8639
chr1:224625773-224627649	chr1	+	224626176	224627248	True	NM_001115113,NM_014184,NM_025160	chr1,chr1,chr1	-,+,-	WDR26,CNIH4,WDR26	-4175,-81645,-4175
chr13:111214364-111214827	chr13	+	111214405	111214714	True	NM_017817,NM_018210	chr13,chr13	-,+	RAB20,CARKD	-334,53293
chr3:125311952-125312211	chr3	+	125312084	125312191	True	NM_022776,NR_024250	chr3,chr3	-,+	OSBPL11,LOC100125556	2243,323252
chr2:5833766-5834012	chr2	+	5833770	5834060	True	NR_034134,NM_003108	chr2,chr2	-,+	LOC727982,SOX11	-1129958,-1022
chr2:14773360-14773774	chr2	+	14773364	14773586	True	NM_015909,NM_145175	chr2,chr2	-,+	NBAS,FAM84A	927918,-605
chr12:6759339-6760211	chr12	+	6759593	6760097	True	NM_001164094,NM_032489	chr12,chr12	+,-	COPS7A,ACRBP	73052,-3013
chr1:40419730-40420220	chr1	+	40419733	40420211	True	NM_005376,NM_001136493,NM_032793	chr1,chr1,chr1	-,+,+	MYCL1,MFSD2A,MFSD2A	-52046,572,572
chr6:16761270-16761944	chr6	+	16761321	16761887	True	NM_001128164,NM_001190766,NM_000332	chr6,chr6,chr6	-,+,-	ATXN1,FLJ23152,ATXN1	58,340601,58
chr1:94585721-94586689	chr1	+	94585724	94586705	True	NM_000350,NR_030621	chr1,chr1	-,+	ABCA4,MIR760	50,-273387
chr8:95834854-95835354	chr8	+	95834971	95835310	True	NM_017864,NM_057749	chr8,chr8	+,-	INTS8,CCNE2	223,72225
chr17:79680801-79681060	chr17	+	79680915	79681061	True	NM_001040025,NM_012140	chr17,chr17	-,+	ARL16,SLC25A10	-29961,-1595
chr21:14408496-14409814	chr21	+	14408614	14409752	True	NR_026916,NR_036164	chr21,chr21	+,-	ANKRD30BP2,MIR3156-3	734,369079
chr7:66310195-66310637	chr7	+	66310462	66310572	True	NR_003934,NM_017994	chr7,chr7	-,+	LOC729156,C7orf42	-649,75630
chr7:87256250-87257058	chr7	+	87256525	87257107	True	NM_000927,NM_001134406,NM_001134405,NM_138290	chr7,chr7,chr7,chr7	-,+,+,+	ABCB1,RUNDC3B,RUNDC3B,RUNDC3B	85582,621,621,621
chr3:186855465-186856769	chr3	+	186855712	186856514	True	NM_052969,NM_153708	chr3,chr3	-,+	RPL39L,RTP1	799,58759
chr7:99608374-99610352	chr7	+	99608557	99609897	True	NM_001185,NM_003439	chr7,chr7	-,+	AZGP1,ZKSCAN1	-34822,3321
chr1:90455489-90455797	chr1	+	90455540	90455840	True	NM_182976,NM_182975,NR_002830	chr1,chr1,chr1	+,+,-	ZNF326,ZNF326,GEMIN8P4	4837,4837,4737
chrX:85579672-85581195	chrX	+	85580147	85581127	True	NM_001145414,NM_001139515	chrX,chrX	-,+	CHM,DACH2	-277581,-62231
chr1:6762287-6762625	chr1	+	6762483	6762549	True	NM_018198,NM_138350	chr1,chr1	-,+	DNAJC11,THAP3	-517,-77324
chr18:33767595-33767858	chr18	+	33767669	33767887	True	NM_017947,NM_001099406	chr18,chr18	+,-	MOCOS,SLC39A6	-240,-58312
chr12:67660817-67661678	chr12	+	67660899	67661732	True	NM_021150,NM_018448	chr12,chr12	-,+	GRIP1,CAND1	-587974,1328
chr7:6099447-6099759	chr7	+	6099535	6099761	True	NM_001134335,NM_032172,NM_014413	chr7,chr7,chr7	-,+,-	EIF2AK1,USP42,EIF2AK1	-675,44788,-675
chr1:25601635-25603412	chr1	+	25601838	25602889	True	NM_001127691,NM_020317,NM_016124	chr1,chr1,chr1	+,-,+	RHD,C1orf63,RHD	-2908,-27853,-2908
chr3:113413611-113414628	chr3	+	113413905	113414683	True	NM_001690,NM_001009899	chr3,chr3	+,-	ATP6V1A,KIAA2018	51182,872
chr18:5896302-5897038	chr18	+	5896330	5897050	True	NM_001080209,NR_015389	chr18,chr18	-,+	TMEM200C,LOC339290	-4227,-658283
chr7:34863403-34863968	chr7	+	34863503	34863947	True	NR_015356,NM_207173	chr7,chr7	-,+	AAA1,NPSR1	10046,-165657
chr22:20307532-20307836	chr22	+	20307774	20307836	True	NR_026919,NM_033257	chr22,chr22	+,-	LOC150197,DGCR6L	-113970,-146
chr20:1305661-1305898	chr20	+	1305716	1305944	True	NM_014723,NM_001199784,NM_080489	chr20,chr20,chr20	+,-,-	SNPH,SDCBP2,SDCBP2	-58807,619,3985
chr10:72025227-72025938	chr10	+	72025306	72025962	True	NM_022146,NM_004096	chr10,chr10	-,+	NPFFR1,EIF4EBP2	17538,137898
chr11:75916666-75917270	chr11	+	75916766	75917284	True	NM_004626,NM_020193	chr11,chr11	-,+	WNT11,C11orf30	340,238784
chr3:111843912-111845348	chr3	+	111843986	111845373	True	NR_030292,NM_152785,NM_001190259,NM_001190260	chr3,chr3,chr3,chr3	+,-,-,-	MIR567,GCET2,GCET2,GCET2	-12389,6829,6829,6829
chr19:7696740-7697300	chr19	+	7696798	7697281	True	NM_006949,NR_033242,NM_020196,NM_174895,NM_001127396,NM_001171155	chr19,chr19,chr19,chr19,chr19,chr19	+,+,-,-,+,+	STXBP2,LOC100131801,XAB2,PCP2,STXBP2,LOC100131801	4709,-2178,-2359,1339,4709,-2178
chr6:170192130-170192428	chr6	+	170192151	170192467	True	NR_026781,NR_026780	chr6,chr6	-,+	NCRNA00242,C6orf208	6504,-2033
chr4:87922892-87923927	chr4	+	87922993	87923947	True	NM_144645,NM_005935	chr4,chr4	-,+	C4orf36,AFF1	-109418,4205
chr5:65020925-65021793	chr5	+	65020926	65021630	True	NM_020726,NM_019072	chr5,chr5	+,-	NLN,SGTB	-2961,-2985
chr5:139029145-139029356	chr5	+	139029223	139029405	True	NM_016463,NM_198282	chr5,chr5	+,-	CXXC5,TMEM173	-973,-166880
chr15:40522898-40524413	chr15	+	40523000	40524183	True	NM_020168,NM_001039905	chr15,chr15	+,-	PAK6,C15orf56	7851,20977
chrX:154611320-154611582	chrX	+	154611365	154611425	True	NR_036049,NM_001007524,NM_080720,NM_012151,NM_001007523,NR_036260,NR_036259,NM_001017991,NM_001017990	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,-,-,+,+	MIR1184-1,F8A3,H2AFB3,F8A1,F8A2,MIR1184-3,MIR1184-2,H2AFB2,H2AFB1	1472,338,-988,323,338,1472,1472,-980,-988
chrX:154611320-154611582	chrX	-	154688599	154688659	False	NR_036049,NM_001007524,NM_080720,NM_012151,NM_001007523,NR_036260,NR_036259,NM_001017991,NM_001017990	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,-,-,-,-,+,+,-,-	MIR1184-1,F8A3,H2AFB3,F8A1,F8A2,MIR1184-3,MIR1184-2,H2AFB2,H2AFB1	-1472,-338,987,-323,-338,-1472,-1472,979,987
chr9:507207-507548	chr9	+	507323	507397	True	NM_152569,NM_015158	chr9,chr9	-,+	C9orf66,KANK1	-291430,-2671
chr15:43027510-43027804	chr15	+	43027530	43027690	True	NM_020759,NM_138477	chr15,chr15	+,-	STARD9,CDAN1	-159730,1777
chr7:100423973-100424353	chr7	+	100424088	100424282	True	NM_020246,NM_004444	chr7,chr7	+,-	SLC12A9,EPHB4	26075,911
chr22:26893764-26895378	chr22	+	26894701	26895401	True	NM_001013694,NM_001008697	chr22,chr22	+,-	SRRD,TFIP11	-14902,13086
chr1:64667552-64668498	chr1	+	64667983	64668367	True	NM_152489,NM_014288	chr1,chr1	+,-	UBE2U,ITGB3BP	1122,-679148
chrX:28615702-28616836	chrX	+	28615868	28616747	True	NM_014271,NM_001017930	chrX,chrX	+,-	IL1RAPL1,DCAF8L1	-10246,-616302
chr17:8769074-8769569	chr17	+	8769140	8769528	True	NM_004822,NM_001010855	chr17,chr17	+,-	NTN1,PIK3R6	155330,1516
chr3:155525342-155526844	chr3	+	155525652	155526434	True	NM_003875,NM_173657	chr3,chr3	+,-	GMPS,C3orf33	61890,-1597
chr8:40754664-40755180	chr8	+	40754813	40755059	True	NM_001174124,NM_024645,NM_001135731	chr8,chr8,chr8	+,-,-	GOLGA7,ZMAT4,ZMAT4	593021,334,334
chr12:132513276-132514264	chr12	+	132513282	132513924	True	NM_175066,NR_002979	chr12,chr12	-,+	DDX51,SNORA49	115006,1844
chr6:35762833-35763861	chr6	+	35762921	35763725	True	NM_182548,NM_001832	chr6,chr6	+,-	LHFPL5,CLPS	9345,1427
chr3:127319565-127320361	chr3	+	127319656	127320067	True	NM_001142646,NM_004526	chr3,chr3	-,+	TPRA1,MCM2	-10088,-2454
chr15:79166858-79168011	chr15	+	79167040	79167640	True	NM_014272,NM_206839,NM_006791	chr15,chr15,chr15	-,+,+	ADAMTS7,MORF4L1,MORF4L1	-63267,-1919,-1919
chr1:25747247-25748171	chr1	+	25747386	25748188	True	NM_020485,NM_138618,NM_138616,NM_138617,NM_018202	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	RHCE,RHCE,RHCE,RHCE,TMEM57	-23,-23,-23,-23,9199
chr1:25747247-25748171	chr1	-	25598560	25598779	False	NM_001127691,NM_020317,NM_016124	chr1,chr1,chr1	+,-,+	RHD,C1orf63,RHD	201,-24575,201
chr12:97854763-97856166	chr12	+	97854791	97856002	True	NR_024037,NR_036189	chr12,chr12	+,-	RMST,MIR4303	2796,533277
chr5:83018315-83019115	chr5	+	83018499	83019063	True	NM_001884,NM_004385	chr5,chr5	-,+	HAPLN1,VCAN	-1603,-251057
chr17:1548211-1548555	chr17	+	1548400	1548498	True	NM_001163673,NR_028075,NM_031430,NR_028076,NM_145352,NM_145350,NM_003693	chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,-,-,-,-	WDR81,SCARF1,RILP,SCARF1,SCARF1,SCARF1,SCARF1	71318,593,4944,593,593,593,593
chr14:69865912-69866147	chr14	+	69865912	69866186	True	NM_004450,NM_018375	chr14,chr14	-,+	ERH,SLC39A9	-891,-556
chr10:105990411-105991568	chr10	+	105990442	105991357	True	NM_001191003,NM_025145	chr10,chr10	+,-	GSTO1,WDR96	22594,813
chr2:165792051-165793965	chr2	+	165792315	165793934	True	NM_001040142,NM_001199148	chr2,chr2	+,-	SCN2A,SLC38A11	301977,18159
chr1:209601667-209602378	chr1	+	209601694	209602188	True	NR_029622,NM_001104548,NR_036213	chr1,chr1,chr1	+,+,-	MIR205,LOC642587,MIR4260	3289,-21,194717
chr1:21981487-21982250	chr1	+	21981668	21982238	True	NM_001177520,NM_001145658	chr1,chr1	+,-	ALPL,RAP1GAP	-145872,-3320
chr19:41869901-41870360	chr19	+	41869990	41870394	True	NM_030578,NM_001098825	chr19,chr19	-,+	B9D2,TMEM91	2,-170
chr19:54468254-54468519	chr19	+	54468255	54468565	True	NM_198481,NM_031895	chr19,chr19	-,+	VSTM1,CACNG8	98692,-2016
chr7:100862798-100864123	chr7	+	100863092	100864031	True	NM_001084,NM_006349	chr7,chr7	-,+	PLOD3,ZNHIT1	-2081,-2158
chr22:36646383-36647042	chr22	+	36646753	36646847	True	NM_145637,NM_145343,NM_001136540,NM_001136541,NM_003661	chr22,chr22,chr22,chr22,chr22	-,+,+,+,+	APOL2,APOL1,APOL1,APOL1,APOL1	-10753,2269,2269,2269,2269
chr6:42418411-42418734	chr6	+	42418584	42418708	True	NM_001184801,NM_033502	chr6,chr6	+,-	UBR2,TRERF1	113051,1125
chr19:12266823-12267125	chr19	+	12266996	12267084	True	NM_003437,NR_037801,NR_037802,NM_145233	chr19,chr19,chr19,chr19	+,-,-,-	ZNF136,ZNF625,ZNF625-ZNF20,ZNF625	6787,512,512,512
chr2:99907745-99908469	chr2	+	99907782	99908444	True	NM_174898,NM_015904	chr2,chr2	-,+	LYG1,EIF5B	9251,45389
chr7:1596815-1597332	chr7	+	1596842	1596964	True	NR_021487,NM_001097620	chr7,chr7	+,-	KIAA1908,TMEM184A	12744,-776
chr13:50334844-50335583	chr13	+	50334892	50335343	True	NM_002267,NR_003268	chr13,chr13	-,+	KPNA3,CTAGE10P	31765,129201
chr19:41818970-41820340	chr19	+	41818989	41820388	True	NM_052848,NM_000660	chr19,chr19	+,-	CCDC97,TGFB1	-2946,39493
chr2:25195262-25196427	chr2	+	25195377	25196285	True	NM_016544,NM_001198559,NR_034113	chr2,chr2,chr2	-,-,+	DNAJC27,DNAJC27,LOC729723	-414,-414,-447
chrX:119699876-119700343	chrX	+	119699897	119700149	True	NM_014060,NM_003588,NM_001079872	chrX,chrX,chrX	+,-,-	MCTS1,CUL4B,CUL4B	37594,9599,-5080
chr17:44074015-44074356	chr17_ctg5_hap1	-	793356	793644	False	NM_001007532,NR_024559	chr17_ctg5_hap1,chr17_ctg5_hap1	-,+	STH,LOC100128977	-2223,101049
chr17:44074015-44074356	chr17	+	44074104	44074392	True	NM_001007532,NR_024559	chr17,chr17	+,-	STH,LOC100128977	2223,-101225
chr6:33756936-33757357	chr6	+	33757025	33757394	True	NM_001143944,NM_002224,NM_181336	chr6,chr6,chr6	-,+,-	LEMD2,ITPR3,LEMD2	-2306,-167920,-119
chr1:152380564-152382356	chr1	+	152380791	152382133	True	NM_178438,NM_016190	chr1,chr1	+,-	LCE5A,CRNN	101186,4667
chr9:71651156-71651936	chr9	+	71651173	71651980	True	NM_001161706,NM_000144,NM_181425,NM_002732	chr9,chr9,chr9,chr9	+,+,+,-	FXN,FXN,FXN,PRKACG	-752,-752,-752,-22134
chr1:227491846-227493386	chr1	+	227492263	227493246	True	NM_178549,NM_003607	chr1,chr1	+,-	ZNF678,CDC42BPA	257973,12636
chr13:19689242-19690639	chr13	+	19689380	19690559	True	NR_002801,NR_026852	chr13,chr13	-,+	PHF2P1,LOC348021	1914,-107032
chr8:67974569-67975474	chr8	+	67974569	67975115	True	NM_024790,NM_006837	chr8,chr8	+,-	CSPP1,COPS5	1487,-7
chr1:167206725-167207175	chr1	+	167206787	167206856	True	NR_037163,NM_005814	chr1,chr1	+,-	POU2F1,GPA33	-16722,-146919
chr11:10715443-10716162	chr11	+	10715670	10716202	True	NM_001100167,NM_130385,NM_014633,NM_001100163	chr11,chr11,chr11,chr11	-,-,+,-	MRVI1,MRVI1,CTR9,MRVI1	-565,-135,56608,-135
chr3:169635722-169636788	chr3	+	169636169	169636626	True	NR_027622,NM_182610	chr3,chr3	-,+	LOC100128164,SAMD7	47955,-6747
chr17:4870757-4870975	chr17	+	4870808	4871008	True	NM_004890,NM_053013	chr17,chr17	-,+	SPAG7,ENO3	174,-16475
chr10:89620716-89620935	chr10	+	89620804	89620962	True	NM_000314,NM_001126049	chr10,chr10	+,-	PTEN,KLLN	2232,2282
chr4:165980062-165980321	chr4	+	165980072	165980306	True	NM_001100389,NM_152620	chr4,chr4	-,+	TMEM192,TRIM60	53768,-26972
chr18:32922625-32923815	chr18	+	32922755	32923673	True	NR_024566,NM_006965	chr18,chr18	+,-	ZNF271,ZNF24	-52582,811
chr2:162893150-162894986	chr2	+	162893155	162894669	True	NM_001935,NM_012198	chr2,chr2	-,+	DPP4,GCA	36434,305913
chr11:6640445-6640780	chr11	+	6640453	6640755	True	NM_001014795,NM_000391,NM_006284	chr11,chr11,chr11	+,-,-	ILK,TPP1,TAF10	-15297,-13,-7008
chr13:36916757-36918070	chr13	+	36916935	36917907	True	NM_015087,NM_001111046,NM_001142296,NM_001142295	chr13,chr13,chr13,chr13	-,+,-,-	SPG20,CCNA1,SPG20,SPG20	2789,88059,2789,3077
chr20:47802469-47803337	chr20	+	47802957	47803376	True	NM_017454,NM_017895,NM_017452,NM_017453,NM_004602,NM_001037328	chr20,chr20,chr20,chr20,chr20,chr20	-,+,-,-,-,-	STAU1,DDX27,STAU1,STAU1,STAU1,STAU1	1578,32455,1578,1578,1578,1578
chr7:129006471-129008128	chr7	+	129006775	129007931	True	NM_001130722,NM_001130723,NR_034053	chr7,chr7,chr7	+,+,-	AHCYL2,AHCYL2,TNPO3	7552,32,-311548
chr10:43894258-43894688	chr10	+	43894315	43894615	True	NM_001098208,NM_001098205,NM_173160,NM_001098206,NM_001098207	chr10,chr10,chr10,chr10,chr10	-,-,+,-,-	HNRNPF,HNRNPF,FXYD4,HNRNPF,HNRNPF	-2036,9775,-27285,8742,-1521
chr14:81687460-81687752	chr14	+	81687468	81687790	True	NM_201595,NM_015859,NM_000369	chr14,chr14,chr14	-,-,+	GTF2A1,GTF2A1,TSHR	17,-174,-265650
chr9:91008460-91008853	chr9	+	91008705	91008772	True	NM_006717,NM_001100111	chr9,chr9	+,-	SPIN1,LOC286238	-5469,258360
chr1:161166165-161167240	chr1	+	161166254	161167154	True	NM_004550,NM_005099,NM_001166159	chr1,chr1,chr1	+,-,+	NDUFS2,ADAMTS4,NDUFS2	1950,1741,4782
chr6:32164420-32165132	chr6_qbl_hap6	+	3425850	3425928	False	NM_022107,NM_002586,NR_003129	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	-,-,+	GPSM3,PBX2,RNF5P1	-1532,-6869,-18649
chr6:32164420-32165132	chr6_mcf_hap5	+	3544657	3544735	False	NM_022107,NM_002586,NR_003129	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	-,-,+	GPSM3,PBX2,RNF5P1	-1533,-6870,-18647
chr6:32164420-32165132	chr6_mann_hap4	+	3507654	3507732	False	NM_022107,NM_002586,NR_003129	chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4	-,-,+	GPSM3,PBX2,RNF5P1	-1533,-6870,-18649
chr6:32164420-32165132	chr6	+	32164833	32164911	True	NM_022107,NM_002586,NR_003129	chr6,chr6,chr6	-,-,+	GPSM3,PBX2,RNF5P1	-1533,-6870,-18652
chr6:32164420-32165132	chr6_cox_hap2	+	3635511	3635589	False	NM_022107,NM_002586,NR_003129	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	-,-,+	GPSM3,PBX2,RNF5P1	-1533,-6870,-18649
chr16:13334397-13335091	chr16	+	13334444	13335048	True	NM_001145204,NM_018340	chr16,chr16	+,-	SHISA9,CPPED1	-339025,-436700
chr17:34798442-34798858	chr17	+	34798505	34798571	True	NM_001040282,NM_004773,NM_001001418	chr17,chr17,chr17	-,+,-	TBC1D3G,ZNHIT3,TBC1D3C	9582,43901,9570
chr17:34798442-34798858	chr17	-	36293495	36293579	False	NM_032258,NR_024178,NM_001123391	chr17,chr17,chr17	+,-,+	TBC1D3F,LOC284100,TBC1D3	-9604,-49132,-9604
chr17:34798442-34798858	chr17	+	36339046	36339130	False	NM_032258,NM_001123391	chr17,chr17	-,-	TBC1D3F,TBC1D3	9604,9604
chr17:34798442-34798858	chr17	+	34747454	34747520	False	NM_001123392,NM_004773	chr17,chr17	-,+	TBC1D3H,ZNHIT3	9580,94952
chr17:34798442-34798858	chr17	+	34494394	34494460	False	NM_001001417,NM_001001435	chr17,chr17	-,+	TBC1D3B,CCL4L1	9578,44007
chr17:34798442-34798858	chr17	+	34582420	34582504	False	NM_207007,NM_001001418	chr17,chr17	+,-	CCL4L2,TBC1D3C	-44021,9591
chr11:119055486-119056177	chr11	+	119055554	119055754	True	NM_001168468,NM_024791,NM_001145018,NR_033122	chr11,chr11,chr11,chr11	+,+,-,+	PDZD3,PDZD3,CCDC153,PDZD3	411,411,10880,411
chr7:150744992-150745630	chr7	+	150745036	150745510	True	NM_004769,NM_001164410,NM_020321,NM_020322,NM_001199692,NM_004935	chr7,chr7,chr7,chr7,chr7,chr7	+,-,+,+,+,-	ACCN3,CDK5,ACCN3,ACCN3,SLC4A2,CDK5	94,9592,94,94,9788,9592
chr13:39553568-39553983	chr13	+	39553720	39554000	True	NM_001012754,NM_001144033	chr13,chr13	+,-	NHLRC3,STOML3	58454,11046
chr9:130924580-130925104	chr9	+	130924595	130925137	True	NM_024112,NM_001131016	chr9,chr9	+,-	C9orf16,CIZ1	-2107,28781
chrX:41956847-41958329	chrX	+	41956926	41958251	True	NM_003688,NM_080817	chrX,chrX	-,+	CASK,GPR82	-174639,-373576
chr19:42829320-42829598	chr19	+	42829360	42829542	True	NM_001145940,NM_001410	chr19,chr19	-,+	PAFAH1B3,MEGF8	-22408,218
chr10:30332740-30333436	chr10	+	30332799	30333435	True	NM_020848,NM_005204	chr10,chr10	-,+	KIAA1462,MAP3K8	15103,389430
chr20:62489739-62489994	chr20	+	62489772	62489862	True	NM_080622,NM_025224,NM_199359,NM_003288,NM_199363,NM_199362,NM_199361,NM_199360	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,-,+,+,+,+,+,+	ABHD16B,ZBTB46,TPD52L2,TPD52L2,TPD52L2,TPD52L2,TPD52L2,TPD52L2	2703,-52916,6727,6727,6727,6727,6727,6727
chr7:35142118-35143428	chr7	+	35142666	35143306	True	NR_002833,NM_207173	chr7,chr7	-,+	DPY19L2P1,NPSR1	4090,-444826
chr10:75531649-75532025	chr10	+	75531705	75532003	True	NM_003635,NM_203298,NM_173540	chr10,chr10,chr10	-,+,+	NDST2,CHCHD1,FUT11	39636,9804,45
chr8:19526357-19528326	chr8	+	19526380	19528346	True	NM_018371,NM_018142	chr8,chr8	-,+	CSGALNACT1,INTS10	11798,146571
chr1:205524793-205526524	chr1	+	205524797	205526047	True	NM_181644,NR_027086	chr1,chr1	+,-	MFSD4,LOC284578	12064,-6
chr16:84178894-84179109	chr16	+	84178898	84179138	True	NM_031463,NM_001146051,NM_178452	chr16,chr16,chr16	-,-,+	HSDL1,HSDL1,LRRC50	-98,-98,-84
chr3:15649351-15650162	chr3	+	15649455	15649974	True	NM_000060,NM_012260	chr3,chr3	+,-	BTD,HACL1	-6252,-6325
chr17:10448972-10450262	chr17	+	10449161	10450047	True	NM_001100112,NM_020233,NM_017534	chr17,chr17,chr17	-,+,-	MYH2,C17orf48,MYH2	2943,150879,3020
chr16:22526501-22527987	chr16	+	22526875	22527865	True	NM_001135865,NR_027460	chr16,chr16	+,-	LOC100132247,RRN3P3	-2082,-77839
chr16:22526501-22527987	chr16	-	21433684	21434674	False	NR_026675,NM_130464	chr16,chr16	+,-	NCRNA00169,NPIPL3	-121565,2034
chr16:22526501-22527987	chr16	-	21865962	21866952	False	NM_003366,NR_003370	chr16,chr16	+,-	UQCRC2,RRN3P1	97656,-35467
chr16:22526501-22527987	chr16	-	29514859	29515179	False	NR_002557,NM_177552	chr16,chr16	-,+	LOC613038,SULT1A3	-35960,-43703
chr16:22526501-22527987	chr16	-	30254828	30255148	False	NR_002555,NM_177552	chr16,chr16	-,+	LOC613037,SULT1A3	1834,-44330
chr8:7709233-7709926	chr8	+	7709289	7709761	True	NM_152250,NM_001081552,NM_058203	chr8,chr8,chr8	-,+,+	DEFB105A,SPAG11A,SPAG11B	-27929,-3939,-3939
chr8:7709233-7709926	chr8	-	7316832	7317304	False	NM_001040703,NM_016512,NM_058206,NM_058207,NM_058200,NM_058201,NM_058202,NM_058203	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	+,-,-,-,-,-,-,-	DEFB105B,SPAG11B,SPAG11B,SPAG11B,SPAG11B,SPAG11B,SPAG11B,SPAG11B	27938,3939,-6945,-6945,3939,3939,3939,3939
chr1:4040086-4040924	chr1	+	4040093	4040903	True	NR_024455,NM_207356	chr1,chr1	+,-	LOC100133612,C1orf174	-223176,-223236
chr20:48326024-48327115	chr20	+	48326510	48326736	True	NM_015266,NM_004776	chr20,chr20	+,-	SLC9A8,B4GALT5	102513,3735
chr17:79195822-79196216	chr17	+	79195821	79196255	True	NM_001009811,NM_014984,NM_001086521	chr17,chr17,chr17	-,-,+	AZI1,AZI1,C17orf89	546,546,16855
chr11:65338471-65338968	chr11	+	65338487	65338770	True	NM_001099409,NM_006396,NM_152832,NM_021070,NM_001098785,NM_001098784	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,-,+,+	EHBP1L1,SSSCA1,FAM89B,LTBP3,FAM89B,FAM89B	4738,-595,1049,-12788,1049,1049
chr1:198132343-198133437	chr1	+	198132841	198133466	True	NM_133494,NM_133262	chr1,chr1	+,-	NEK7,ATP6V1G3	-6792,376659
chr17:62223435-62223736	chr17	+	62223451	62223697	True	NR_004380,NM_001433,NR_002995	chr17,chr17,chr17	+,-,+	SNORD104,ERN1,SNORA76	-64,-15949,1
chr10:102290274-102290848	chr10	+	102290371	102290782	True	NM_017902,NM_005004	chr10,chr10	+,-	HIF1AN,NDUFB8	4858,-735
chr14:58667112-58668577	chr14	+	58667344	58668313	True	NM_018477,NM_001001872	chr14,chr14	+,-	ACTR10,C14orf37	-562,-48497
chr4:186699493-186699764	chr4	+	186699498	186699765	True	NM_001145673,NM_003265	chr4,chr4	-,+	SORBS2,TLR3	-2432,290543
chr11:45793823-45794360	chr11	+	45793890	45794398	True	NR_027134,NM_003654	chr11,chr11	+,-	DKFZp779M0652,CHST1	-959,-106718
chr6:151712796-151713129	chr6	+	151712967	151713177	True	NM_020861,NM_024573	chr6,chr6	-,+	ZBTB2,C6orf211	-290,60244
chr21:37946973-37947446	chr21	+	37947038	37947468	True	NM_001146077,NM_009586	chr21,chr21	-,+	CLDN14,SIM2	1449,124522
chr20:44562557-44562803	chr20	+	44562636	44562812	True	NM_022104,NM_182676	chr20,chr20	+,-	PCIF1,PLTP	504,-21850
chr19:3574807-3575302	chr19	+	3575037	3575319	True	NM_174983,NM_006339	chr19,chr19	-,+	C19orf28,HMG20B	-17466,-2146
chr1:211289332-211290820	chr1	+	211289723	211290592	True	NM_001136225,NM_002238	chr1,chr1	+,-	RCOR3,KCNH1	142115,16922
chr8:141523348-141523625	chr8	+	141523348	141523498	True	NR_023360,NM_031466,NM_017444	chr8,chr8,chr8	+,-,+	CHRAC1,TRAPPC9,CHRAC1	-1988,-54670,-2002
chr1:52525557-52527082	chr1	+	52525796	52526891	True	NR_024350,NM_001136497,NM_152265,NM_015913	chr1,chr1,chr1,chr1	+,+,+,-	BTF3L4,BTF3L4,BTF3L4,TXNDC12	-3999,-3999,-3999,-4749
chr3:139008361-139009520	chr3	+	139008508	139009430	True	NR_027070,NM_020191	chr3,chr3	-,+	PISRT1,MRPS22	-56144,53430
chr6:76309298-76309500	chr6	+	76309374	76309483	True	NM_015687,NM_015571,NM_001100409	chr6,chr6,chr6	-,+,+	FILIP1,SENP6,SENP6	-105878,2138,2138
chr19:18683433-18684504	chr19	+	18683475	18684384	True	NM_012181,NM_001033930,NM_003333	chr19,chr19,chr19	-,+,+	FKBP8,UBA52,UBA52	-29092,-912,-912
chr8:33345739-33346507	chr8	+	33345867	33346451	True	NM_032664,NM_032509	chr8,chr8	-,+	FUT10,MAK16	-15203,-3241
chr8:73921021-73921344	chr8	+	73921095	73921267	True	NM_003218,NM_153225,NM_017489	chr8,chr8,chr8	+,-,+	TERF1,C8orf84,TERF1	-49,84290,-49
chr21:44589384-44589736	chr21	+	44589438	44589690	True	NM_006758,NM_000394	chr21,chr21	-,+	U2AF1,CRYAA	-61750,-348
chr17:31621247-31622736	chr17	+	31621419	31622732	True	NM_183377,NM_173847	chr17,chr17	-,+	ACCN1,SPACA3	-1413,-302588
chr12:65518377-65519803	chr12	+	65518518	65519724	True	NM_001167614,NM_007191	chr12,chr12	+,-	LEMD3,WIF1	43626,-3172
chr17:14206327-14206814	chr17	+	14206422	14206856	True	NR_026880,NM_006041,NM_001007530	chr17,chr17,chr17	+,+,-	MGC12916,HS3ST3B1,CDRT15	200,-1967,-66272
chr15:77286979-77287450	chr15	+	77286992	77287346	True	NM_003978,NM_001168412	chr15,chr15	+,-	PSTPIP1,TSPAN3	118,76274
chr3:97693032-97693730	chr3	+	97693517	97693775	True	NM_032778,NM_001042533,NM_153182,NM_054106	chr3,chr3,chr3,chr3	-,-,-,+	MINA,MINA,MINA,OR5AC2	-2293,-2293,-2222,112241
chr7:142636139-142636529	chr7	+	142636161	142636545	True	NM_019841,NM_178829	chr7,chr7	-,+	TRPV5,C7orf34	-5341,57
chrX:13337835-13338085	chrX	+	13337916	13338122	True	NM_001167890,NM_001135995	chrX,chrX	+,-	EGFL6,ATXN3L	249571,446
chr21:35898336-35899583	chr21	+	35898480	35899620	True	NM_053277,NM_203418	chr21,chr21	+,-	CLIC6,RCAN1	142067,1
chr19:16936997-16938922	chr19	+	16937077	16938533	True	NM_024104,NM_015260	chr19,chr19	-,+	C19orf42,SIN3B	-166109,1684
chr7:23639371-23640082	chr7	+	23639401	23639988	True	NM_138771,NR_002711	chr7,chr7	+,-	CCDC126,CLK2P	-2462,-13255
chr8:104422142-104422502	chr8	+	104422150	104422436	True	NM_030780,NM_015420	chr8,chr8	-,+	SLC25A32,DCAF13	5090,4505
chr12:59307351-59309041	chr12	+	59307373	59309078	True	NM_004731,NM_153377,NM_001136051	chr12,chr12,chr12	+,-,-	SLC16A7,LRIG3,LRIG3	774047,5236,4301
chr12:25652164-25653964	chr12	+	25652390	25653774	True	NM_152590,NM_001001660	chr12,chr12	-,+	IFLTD1,LYRM5	52454,-304303
chr11:36422898-36424326	chr11	+	36423388	36424354	True	NM_001160169,NM_004620	chr11,chr11	+,-	PRR5L,TRAF6	-892,107518
chr15:43425225-43425670	chr15	+	43425482	43425604	True	NM_024956,NM_174916	chr15,chr15	+,-	TMEM62,UBR1	117,-27196
chr3:20082167-20082541	chr3	+	20082189	20082553	True	NM_003884,NR_027694	chr3,chr3	+,-	KAT2B,C3orf48	-716,-28424
chr19:40438871-40439578	chr19	+	40439015	40439439	True	NM_003890,NM_006503	chr19,chr19	-,+	FCGBP,PSMC4	1144,37633
chr5:176429656-176430375	chr5	+	176429911	176430302	True	NM_001199297,NM_012279,NM_016290,NM_001199298	chr5,chr5,chr5,chr5	-,+,-,-	UIMC1,ZNF346,UIMC1,UIMC1	3537,19394,3200,3552
chr9:98785317-98785907	chr9	+	98785390	98785926	True	NR_033838,NR_024129	chr9,chr9	+,-	LOC158435,NCRNA00092	42194,-1353
chr16:57276769-57277253	chr16	+	57276777	57277257	True	NM_015993,NM_012106	chr16,chr16	-,+	PLLP,ARL2BP	41377,1780
chr1:160000905-160001406	chr1	+	160000960	160001430	True	NM_145167,NM_004983	chr1,chr1	-,+	PIGM,KCNJ9	403,49929
chr10:11866908-11867298	chr10	+	11866946	11867290	True	NM_014688,NM_153256	chr10,chr10	-,+	USP6NL,C10orf47	-213267,-1600
chr6:43602388-43603530	chr6	+	43602699	43603467	True	NM_152732,NM_014628,NM_001003690,NM_019096,NM_001193341	chr6,chr6,chr6,chr6,chr6	+,+,+,-,+	RSPH9,MAD2L1BP,MAD2L1BP,GTPBP2,RSPH9	9299,109,-5471,-5763,9299
chr12:9990201-9990626	chr12	+	9990212	9990642	True	NM_005127,NM_016523	chr12,chr12	-,+	CLEC2B,KLRF1	31866,-10194
chr19:58950819-58951082	chr19	+	58950834	58951052	True	NM_207395,NM_003433	chr19,chr19	+,-	ZNF324B,ZNF132	11918,587
chr5:113787098-113787516	chr5	+	113787162	113787333	True	NM_170775,NM_018700	chr5,chr5	+,-	KCNN2,TRIM36	-17995,728967
chr6:20213108-20213587	chr6	+	20213156	20213620	True	NM_001949,NM_001080480	chr6,chr6	+,-	E2F3,MBOAT1	188516,-486
chr2:171569568-171570061	chr2	+	171569623	171570029	True	NM_001003845,NR_027433	chr2,chr2	+,-	SP5,LOC440925	1827,1098
chrX:99662886-99663204	chrX	+	99662891	99663241	True	NM_001105243,NM_001184880,NM_022144,NM_020766	chrX,chrX,chrX,chrX	-,-,+,-	PCDH19,PCDH19,TNMD,PCDH19	2080,2080,176548,2080
chr7:105313746-105313990	chr7	+	105313750	105314038	True	NM_138495,NM_021930	chr7,chr7	-,+	ATXN7L1,RINT1	5621,-141276
chr18:47899229-47900881	chr18	+	47899389	47900886	True	NM_145060,NM_001039535,NM_014593	chr18,chr18,chr18	+,+,-	SKA1,SKA1,CXXC1	505,505,-84697
chr10:74935350-74935877	chr10	+	74935529	74935651	True	NR_024203,NM_173348,NM_007265,NM_001135752,NM_001135753	chr10,chr10,chr10,chr10,chr10	-,+,-,-,-	ECD,FAM149B1,ECD,ECD,ECD	-7676,-7710,-7676,-7676,-7676
chr19:1245697-1245992	chr19	+	1245787	1245967	True	NM_001001975,NM_152769,NM_001687,NM_177401	chr19,chr19,chr19,chr19	+,-,+,+	ATP5D,C19orf26,ATP5D,MIDN	-4089,-7797,-4089,2584
chr17:57702779-57703855	chr17	+	57703038	57703894	True	NM_004859,NM_016077	chr17,chr17	+,-	CLTC,PTRH2	-6049,81015
chr1:169668716-169669370	chr1	+	169668720	169669266	True	NR_029467,NM_018186	chr1,chr1	-,+	SELL,C1orf112	8781,95283
chr11:18282905-18283161	chr11	+	18283054	18283201	True	NM_000331,NM_001178006,NM_199161,NM_030754	chr11,chr11,chr11,chr11	+,+,+,-	SAA1,SAA1,SAA1,SAA2	4606,4606,4606,-12833
chrX:140097603-140098114	chrX	+	140097665	140097857	True	NM_032461,NR_031725,NM_145664,NM_139019	chrX,chrX,chrX,chrX	+,-,+,+	SPANXB1,MIR320D2,SPANXB2,SPANXF1	-955,-89281,-955,-955
chrX:140097603-140098114	chrX	-	140335756	140335806	False	NM_022661,NM_145664	chrX,chrX	-,+	SPANXC,SPANXB2	890,-239046
chrX:140097603-140098114	chrX	+	140085660	140085852	False	NM_032461,NR_031725,NM_145664,NM_139019	chrX,chrX,chrX,chrX	+,-,+,+	SPANXB1,MIR320D2,SPANXB2,SPANXF1	-955,-77276,-955,-955
chr18:44083869-44085439	chr18	+	44083945	44085492	True	NM_001173129,NM_152470	chr18,chr18	-,+	LOXHD1,RNF165	13615,-169816
chr7:126987620-126987889	chr7	+	126987628	126987896	True	NM_001662,NM_176814	chr7,chr7	+,-	ARF5,ZNF800	240509,44921
chr15:85054774-85056190	chr15	+	85055053	85055865	True	NR_003246,NR_033787	chr15,chr15	-,+	GOLGA6L5,DNM1P41	4263,-9298
chr1:153232480-153233291	chr1	+	153232675	153233227	True	NM_052891,NM_000427	chr1,chr1	-,+	PGLYRP3,LOR	50017,-549
chr18:76738109-76738557	chr18	+	76738129	76738487	True	NM_001146343,NM_171999	chr18,chr18	-,+	PQLC1,SALL3	973216,1787
chr10:101687139-101688005	chr10	+	101687168	101688006	True	NR_024130,NM_015221	chr10,chr10	+,-	DNMBP-AS1,DNMBP	-263,81720
chr17:76357666-76358118	chr17	+	76357675	76357841	True	NM_003955,NM_024419	chr17,chr17	-,+	SOCS3,PGS1	-1517,16893
chr7:87288145-87288995	chr7	+	87288145	87289000	True	NM_138290,NM_000927	chr7,chr7	+,-	RUNDC3B,ABCB1	-30471,53698
chr20:56723949-56725856	chr20	+	56724326	56725744	True	NM_178456,NR_003505	chr20,chr20	+,-	C20orf85,PPP4R1L	238,158801
chr12:56050306-56051087	chr12	+	56050396	56051108	True	NM_001144996,NM_206899	chr12,chr12	-,+	ITGA7,OR10P1	50628,-19771
chr11:113568281-113568808	chr11	+	113568342	113568750	True	NM_001101389,NM_030770	chr11,chr11	+,-	CLDN25,TMPRSS5	81767,8368
chr21:46963403-46964058	chr21	+	46963551	46964083	True	NM_130444,NM_194255,NM_001205206,NM_001205207	chr21,chr21,chr21,chr21	+,-,-,-	COL18A1,SLC19A1,SLC19A1,SLC19A1	-88178,-1166,-1166,-9009
chr6:149952255-149953433	chr6	+	149952756	149953249	True	NM_138785,NM_001204076	chr6,chr6	+,-	C6orf72,KATNA1	-65287,16741
chr19:53395542-53397059	chr19	+	53395665	53397024	True	NM_152473,NM_207333	chr19,chr19	+,-	HERV-V1,ZNF320	120319,-1066
chr8:15095282-15095656	chr8	+	15095350	15095654	True	NM_139167,NM_006765	chr8,chr8	-,+	SGCZ,TUSC3	188,301941
chr10:47659645-47660684	chr10	+	47659650	47660699	True	NR_003601,NR_024495	chr10,chr10	+,-	ANTXRL,LOC642826	-1467,-416156
chr2:183989710-183990854	chr2	+	183989743	183990601	True	NM_138285,NM_205842	chr2,chr2	+,-	NUP35,NCKAP1	-722,-86514
chr1:247242830-247243685	chr1	+	247242901	247243483	True	NM_173858,NR_037894,NM_001204220,NM_033213	chr1,chr1,chr1,chr1	+,-,-,-	VN1R5,ZNF670-ZNF695,ZNF670,ZNF670	175890,-786,-786,-786
chr17:56233903-56234434	chr17	+	56233902	56234358	True	NR_002307,NM_017777,NM_012374	chr17,chr17,chr17	+,-,+	MSX2P1,MKS1,OR4D1	-39,62358,-1443
chr2:180833586-180835366	chr2	+	180833821	180835415	True	NM_182678,NM_020943	chr2,chr2	+,-	UBE2E3,CWC22	1009696,36415
chr10:21175380-21175592	chr10	+	21175475	21175631	True	NM_006393,NM_001195627	chr10,chr10	-,+	NEBL,MLLT10	10950,647469
chr17:8278460-8279664	chr17	+	8278780	8279599	True	NM_213597,NM_000987,NM_153007	chr17,chr17,chr17	-,-,+	KRBA2,RPL26,ODF4	-3922,7016,-35643
chr16:3085618-3086040	chr16	+	3085641	3085981	True	NM_001103175,NM_022468	chr16,chr16	-,+	CCDC64B,MMP25	-99,10700
chr3:36947134-36949046	chr3	+	36947247	36948473	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	38133,86367
chr2:158126662-158127550	chr2	+	158126714	158127242	True	NM_014568,NM_020711	chr2,chr2	+,-	GALNT5,ERMN	-12440,55224
chr12:58004464-58004702	chr12	+	58004544	58004750	True	NM_001111270,NM_182947,NM_001478,NM_178502,NM_133489	chr12,chr12,chr12,chr12,chr12	+,+,-,+,+	ARHGEF25,ARHGEF25,B4GALNT1,DTX3,SLC26A10	-639,467,22285,-5998,8942
chr14:105942658-105943423	chr14	+	105942836	105943238	True	NM_001312,NM_001519	chr14,chr14	+,-	CRIP2,BRF1	-1756,-175507
chr10:33227540-33227840	chr10	+	33227542	33227778	True	NM_024688,NM_033668	chr10,chr10	+,-	C10orf68,ITGB1	-370942,-3056
chr2:30666925-30668863	chr2	+	30667120	30668898	True	NM_182551,NM_001002257,NM_144575	chr2,chr2,chr2	+,+,-	LCLAT1,LCLAT1,CAPN13	1224,1238,361463
chr18:14390574-14391688	chr18	+	14390850	14391613	True	NR_024076,NR_026756	chr18,chr18	-,+	CXADRP3,LOC284233	107142,-53479
chr12:5017270-5018202	chr12	+	5017295	5017977	True	NM_006422,NM_000217	chr12,chr12	-,+	AKAP3,KCNA1	-262952,1095
chr11:64110775-64111334	chr11	+	64110778	64111026	True	NM_032251,NM_016404	chr11,chr11	+,-	CCDC88B,TRMT112	-3139,-25745
chrY:25365636-25365936	chrY	+	25365695	25365985	True	NM_020364,NM_020420,NM_001005786,NM_001005785,NM_020363	chrY,chrY,chrY,chrY,chrY	+,+,+,+,+	DAZ3,DAZ4,DAZ2,DAZ2,DAZ2	-165,-165,-142,-142,-142
chrY:25365636-25365936	chrY	-	25344849	25345139	False	NM_020364,NM_020420,NM_001005375,NM_004081	chrY,chrY,chrY,chrY	+,-,-,-	DAZ3,DAZ4,DAZ4,DAZ1	20441,165,165,150
chrY:25365636-25365936	chrY	-	26959234	26959524	False	NM_020364,NM_001005375,NM_020420	chrY,chrY,chrY	-,+,-	DAZ3,DAZ4,DAZ4	165,20442,165
chrY:25365636-25365936	chrY	+	26980081	26980371	False	NM_020364,NM_020420,NM_001005375,NM_001005786,NM_001005785	chrY,chrY,chrY,chrY,chrY	+,+,+,+,+	DAZ3,DAZ4,DAZ4,DAZ2,DAZ2	-165,-165,-165,-142,-142
chr17:35732793-35734320	chr17	+	35732890	35734284	True	NM_198836,NM_173625	chr17,chr17	-,+	ACACA,C17orf78	-16831,44
chr7:22548670-22549131	chr7	+	22548669	22548859	True	NM_001164460,NM_207342,NM_000600	chr7,chr7,chr7	-,-,+	MGC87042,MGC87042,IL6	-8768,-8768,217906
chr7:22548670-22549131	chr7	+	35099914	35099965	False	NM_015283,NM_207173	chr7,chr7	-,+	DPY19L1,NPSR1	-22261,-402069
chr7:22548670-22549131	chr7	-	89774433	89774577	False	NM_012449,NM_152706	chr7,chr7	+,-	STEAP1,C7orf62	9111,-1349402
chr4:56683230-56684839	chr4	+	56683654	56684856	True	NR_003935,NM_006681	chr4,chr4	+,-	LOC644145,NMU	1380,-181189
chr2:97509661-97510114	chr2	+	97509755	97510149	True	NM_144994,NM_199078	chr2,chr2	-,+	ANKRD23,CNNM3	3,-27815
chr7:41744975-41745195	chr7	+	41744989	41745141	True	NM_002192,NR_027119	chr7,chr7	-,+	INHBA,LOC285954	-2283,-11494
chr5:86565913-86566255	chr5	+	86566080	86566158	True	NM_001199189,NM_002890,NM_022650	chr5,chr5,chr5	-,+,+	CCNH,RASA1,RASA1	142619,-1990,-1375
chr8:101563464-101564436	chr8	+	101563510	101563990	True	NM_198401,NM_003114	chr8,chr8	-,+	ANKRD46,SPAG1	8072,-392998
chr3:123596156-123597197	chr3	+	123596179	123597171	True	NM_053025,NM_053027,NM_053026,NR_028136,NM_053028	chr3,chr3,chr3,chr3,chr3	-,-,-,+,-	MYLK,MYLK,MYLK,KALRN,MYLK	6028,6028,6028,216386,6028
chr22:41864678-41865067	chr22	+	41864732	41865022	True	NM_032758,NM_001098	chr22,chr22	-,+	PHF5A,ACO2	-24,106
chr2:206546931-206547137	chr2	+	206546982	206547182	True	NM_201266,NM_201267,NM_201264,NM_201279,NM_003872,NM_018534,NM_017759	chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,+,+,-	NRP2,NRP2,NRP2,NRP2,NRP2,NRP2,INO80D	41,41,41,41,41,41,403774
chr13:19580000-19581933	chr13	+	19580786	19581966	True	NR_002801,NR_026852	chr13,chr13	-,+	PHF2P1,LOC348021	110507,432
chr11:124790501-124790813	chr11	+	124790514	124790846	True	NM_152722,NM_001037558	chr11,chr11	-,+	HEPACAM,HEPN1	15512,-1419
chrX:69280528-69281586	chrX	+	69280768	69281466	True	NM_001002254,NM_207320	chrX,chrX	-,+	AWAT2,OTUD6A	-10980,874
chr16:47465425-47466054	chr16	+	47465480	47466090	True	NM_030790,NM_000293	chr16,chr16	-,+	ITFG1,PHKB	28975,29119
chr2:34201262-34201703	chr2	+	34201524	34201578	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-462633,-248240
chr4:87772303-87772744	chr4	+	87772472	87772648	True	NM_001166693,NM_197965	chr4,chr4	+,-	AFF1,SLC10A6	83505,-2056
chr20:34822562-34823038	chr20	+	34822749	34823087	True	NR_027451,NM_015511	chr20,chr20	-,+	LOC647979,C20orf4	-183867,1359
chr12:50227875-50228818	chr12	+	50228112	50228723	True	NM_181708,NM_001037806,NR_027500,NR_027501,NR_027499	chr12,chr12,chr12,chr12,chr12	-,-,+,+,+	BCDIN3D,NCKAP5L,LOC100286844,LOC100286844,LOC100286844	8243,-5904,-5845,-5845,-5845
chr7:98925914-98926292	chr7	+	98926020	98926277	True	NM_014891,NM_006409,NM_001190996	chr7,chr7,chr7	-,+,+	PDAP1,ARPC1A,ARPC1A	80079,-2575,-2575
chr16:30935845-30936069	chr16	+	30935872	30935936	True	NM_001099784,NR_024348	chr16,chr16	+,-	FBXL19,FBXL19-AS1	-27,-1282
chr10:6372718-6374041	chr10	+	6372749	6373847	True	NM_004566,NM_006257	chr10,chr10	+,-	PFKFB3,PRKCQ	-127960,248448
chr9:140173447-140174187	chr9	+	140173535	140174059	True	NM_017723,NM_001004354	chr9,chr9	+,-	C9orf167,NRARP	-1306,22694
chr19:8213726-8213948	chr19	+	8213725	8213945	True	NM_024552,NM_032447	chr19,chr19	+,-	LASS4,FBN3	60271,-1340
chr1:59156060-59157259	chr1	+	59156189	59157242	True	NR_034014,NM_001085487	chr1,chr1	+,-	LOC100131060,MYSM1	93580,8566
chr1:3665253-3666740	chr1	+	3665488	3666795	True	NR_033709,NR_033708,NR_033710,NR_033711,NR_033712,NM_152492	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,+	KIAA0495,KIAA0495,KIAA0495,KIAA0495,KIAA0495,CCDC27	-1551,-1551,-1551,-1551,-2153,2169
chr12:6961870-6962629	chr12	+	6961900	6962578	True	NM_003481,NM_001098536,NM_031299	chr12,chr12,chr12	+,+,-	USP5,USP5,CDCA3	-660,-666,-1444
chr15:64388542-64389067	chr15	+	64388567	64389095	True	NM_032231,NM_001014812,NM_148955,NM_003099,NM_152826	chr15,chr15,chr15,chr15,chr15	-,-,+,+,+	FAM96A,FAM96A,SNX1,SNX1,SNX1	-2360,-2360,-441,-441,-441
chr11:89300464-89301374	chr11	+	89300519	89301387	True	NM_153696,NM_001143837	chr11,chr11	+,-	FOLH1B,NOX4	91077,21442
chr15:85203165-85204228	chr15	+	85203247	85204240	True	NR_004859,NM_032856,NM_021077,NM_205858	chr15,chr15,chr15,chr15	+,-,-,-	SCAND2,WDR73,NMB,NMB	-28620,-5726,-1445,-1445
chr11:57506032-57506796	chr11	+	57506057	57506817	True	NM_001145101,NM_170746	chr11,chr11	-,+	BTBD18,C11orf31	12486,1904
chr10:50748378-50748757	chr10	+	50748458	50748704	True	NM_020984,NM_000124	chr10,chr10	+,-	CHAT,ERCC6	68436,-1311
chr4:2059541-2060091	chr4	+	2059575	2059878	True	NM_005663,NM_178557	chr4,chr4	-,+	WHSC2,NAT8L	-48616,1360
chr17:6338595-6338884	chr17	+	6338601	6338665	True	NM_019013,NM_014336,NM_001195228,NM_001033054,NM_001033055	chr17,chr17,chr17,chr17,chr17	+,-,+,-,-	FAM64A,AIPL1,FAM64A,AIPL1,AIPL1	9069,-82,9069,-82,-82
chr12:51787281-51787983	chr12	+	51787320	51787908	True	NM_004858,NM_007210	chr12,chr12	+,-	SLC4A8,GALNT6	30685,-2120
chr19:59083197-59083813	chr19	+	59083395	59083853	True	NM_003422	chr19	-	MZF1	1139
chr19:21261403-21262080	chr19	+	21261745	21262089	True	NM_182515,NM_021269	chr19,chr19	+,-	ZNF714,ZNF708	2863,250181
chr2:17721068-17721338	chr2	+	17721116	17721268	True	NM_003385,NM_001099218	chr2,chr2	+,-	VSNL1,RAD51AP2	538,-21410
chr2:241073736-241073987	chr2	+	241073749	241073997	True	NM_001163424,NM_148961,NM_138336,NM_002081	chr2,chr2,chr2,chr2	-,-,-,+	MYEOV2,OTOS,MYEOV2,GPC1	1800,6126,1817,301117
chr12:100537982-100539553	chr12	+	100538077	100539473	True	NR_031728,NM_015054,NM_001006947	chr12,chr12,chr12	+,-,-	MIR1827,UHRF1BP1L,UHRF1BP1L	44188,-1435,-1435
chr17:19437777-19438999	chr17	+	19437830	19438430	True	NM_002404,NM_018242	chr17,chr17	-,+	MFAP4,SLC47A1	-147298,-715
chr17:28257892-28259259	chr17	+	28257931	28258998	True	NM_198529,NM_033389,NR_026738,NM_001145053	chr17,chr17,chr17,chr17	+,-,+,+	EFCAB5,SSH2,EFCAB5,EFCAB5	9624,-913,9624,-1115
chr1:226192029-226192738	chr1	+	226192134	226192742	True	NM_152608,NM_002107	chr1,chr1	-,+	C1orf55,H3F3A	-5068,57665
chr16:76385433-76387343	chr16	+	76385456	76387222	True	NM_138994,NM_005548	chr16,chr16	+,-	CNTNAP4,KARS	-41772,-703871
chr7:128292655-128292932	chr7	+	128292771	128292833	True	NR_024368,NM_001708	chr7,chr7	+,-	FLJ45340,OPN1SW	-11527,123061
chr5:134790865-134791667	chr5	+	134790946	134791610	True	NM_145282,NM_130848,NM_001099221	chr5,chr5,chr5	+,-,-	SLC25A48,C5orf20,TIFAB	378754,-7908,-2857
chr19:10382980-10383400	chr19	+	10382985	10383211	True	NM_000201,NM_001103167	chr19,chr19	+,-	ICAM1,ZGLP1	-1519,37072
chr1:178309066-178310691	chr1	+	178309126	178310724	True	NM_004841,NR_027982	chr1,chr1	+,-	RASAL2,LOC100302401	87,-245998
chr1:43832111-43832324	chr1	+	43832205	43832371	True	NM_022821,NM_001255	chr1,chr1	-,+	ELOVL1,CDC20	1378,-7630
chr15:32727299-32727666	chr15	+	32727340	32727402	True	NR_027470,NR_026859,NR_026858,NM_199357	chr15,chr15,chr15,chr15	-,-,-,+	FAM7A2,FAM7A3,FAM7A1,ARHGAP11A	-90,-275,-90,180288
chr15:32727299-32727666	chr15	+	30686006	30686068	False	NM_148911,NM_139320,NR_026858	chr15,chr15,chr15	-,-,+	CHRFAM7A,CHRFAM7A,FAM7A1	-142,-142,178689
chr15:32727299-32727666	chr15	-	30864605	30864667	False	NR_027470,NM_148911,NR_026858	chr15,chr15,chr15	+,-,+	FAM7A2,CHRFAM7A,FAM7A1	90,-178741,90
chr21:19636593-19636840	chr21	+	19636604	19636702	True	NM_002772,NM_001204174	chr21,chr21	-,+	TMPRSS15,CHODL	139318,-18463
chr12:54655581-54656471	chr12	+	54655603	54656499	True	NM_002136,NM_001127322,NM_001127321	chr12,chr12,chr12	+,-,-	HNRNPA1,CBX5,CBX5	17988,-2274,-2233
chr9:137002728-137003023	chr9	+	137002811	137002889	True	NR_023344,NM_017588,NM_052821	chr9,chr9,chr9	-,+,+	RNU6ATAC,WDR5,WDR5	26847,-1652,2024
chr2:87018145-87018603	chr2	+	87018239	87018641	True	NM_001768,NR_037931,NR_027353,NM_171827	chr2,chr2,chr2,chr2	-,+,-,-	CD8A,LOC100286979,CD8A,CD8A	246,70306,246,246
chr13:112720439-112720791	chr13	+	112720465	112720599	True	NM_006322,NM_005986	chr13,chr13	-,+	TUBGCP3,SOX1	521932,1313
chr17:43324422-43324794	chr17	+	43324552	43324784	True	NR_024434,NM_152343	chr17,chr17	+,-	LOC100133991,C17orf46	518,14745
chr20:47443991-47444274	chr20	+	47444158	47444244	True	NM_006420,NM_020820	chr20,chr20	+,-	ARFGEF2,PREX1	94030,226
chr19:52303422-52303840	chr19	+	52303441	52303879	True	NM_002029,NM_002030	chr19,chr19	-,+	FPR1,FPR3	-48291,-5081
chr1:22964268-22964968	chr1	+	22964531	22965001	True	NR_036214,NM_172369,NM_015991,NM_001114101	chr1,chr1,chr1,chr1	-,+,+,+	MIR4253,C1QC,C1QA,C1QC	224768,5116,-1464,5116
chr22:23850551-23850804	chr22	+	23850729	23850801	True	NM_153615,NM_020070	chr22,chr22	+,-	RGL4,IGLL1	182246,71744
chr22:37097628-37098436	chr22	+	37097666	37098472	True	NM_006078,NM_000631	chr22,chr22	-,+	CACNG2,NCF4	268,158557
chr5:124225112-124225928	chr5	+	124225250	124225863	True	NM_004384,NM_020747	chr5,chr5	+,-	CSNK1G3,ZNF608	-1377510,-144445
chr6:10882800-10883022	chr6	+	10882888	10882996	True	NM_004752,NM_001040274	chr6,chr6	-,+	GCM2,SYCP2L	-790,4067
chr6:46278230-46279325	chr6	+	46278314	46279374	True	NM_005822,NM_014936	chr6,chr6	-,+	RCAN2,ENPP4	14207,-180675
chr12:8973689-8974591	chr12	+	8973915	8974505	True	NM_144670,NM_002355	chr12,chr12	+,-	A2ML1,M6PR	644,127807
chr9:2015225-2015481	chr9	+	2015288	2015530	True	NM_139045,NR_015375,NM_003070	chr9,chr9,chr9	+,-,+	SMARCA2,FLJ35024,SMARCA2	3,606893,3
chr2:242301605-242301871	chr2	+	242301628	242301724	True	NM_005336,NM_014808	chr2,chr2	-,+	HDLBP,FARP2	-46374,-6024
chr17:45041444-45041794	chr17	+	45041513	45041768	True	NM_203400,NM_054022	chr17,chr17	-,+	RPRML,GOSR2	14897,-41078
chr3:51990371-51992156	chr3	+	51990476	51992136	True	NM_033008,NM_033010,NM_080865,NM_001174100,NM_020418	chr3,chr3,chr3,chr3,chr3	-,-,+,-,-	PCBP4,PCBP4,GPR62,PCBP4,PCBP4	9396,4822,-1197,9396,9364
chr17:33477623-33478314	chr17	+	33477794	33478296	True	NM_018096,NM_173167,NM_001014445,NM_001033576	chr17,chr17,chr17,chr17	-,+,-,+	NLE1,UNC45B,NLE1,UNC45B	-8472,-3023,-8472,-3023
chr7:8050671-8051536	chr7	+	8050812	8051404	True	NM_022307,NM_138426	chr7,chr7	-,+	ICA1,GLCCI1	250330,-42455
chr2:11684024-11684635	chr2	+	11684037	11684683	True	NR_003095,NM_033090,NM_148903,NM_014668	chr2,chr2,chr2,chr2	-,+,+,+	E2F6,GREB1,GREB1,GREB1	-77740,-1237,-4008,-9846
chr2:233389423-233389956	chr2	+	233389572	233389970	True	NM_001195129,NM_145702,NM_000751	chr2,chr2,chr2	+,-,+	PRSS56,TIGD1,CHRND	-4450,25306,951
chr19:29396551-29397127	chr19	+	29396640	29397156	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	58881,307030
chr3:44040165-44040433	chr3	+	44040201	44040359	True	NM_001204834,NR_029700	chr3,chr3	-,+	ANO10,MIR138-1	-376641,115344
chr19:7852517-7853150	chr19	+	7852812	7853106	True	NR_026692,NR_002931	chr19,chr19	-,+	CD209,CLEC4GP1	-40348,-493
chr15:45406929-45407291	chr15	+	45406933	45407319	True	NM_207581,NM_014080	chr15,chr15	+,-	DUOXA2,DUOX2	-461,-574
chr10:125753255-125754167	chr10	+	125753290	125754124	True	NM_153442,NM_015892	chr10,chr10	+,-	GPR26,CHST15	-327470,97856
chr20:18547415-18547715	chr20	+	18547426	18547730	True	NM_006606,NR_015432	chr20,chr20	-,+	RBBP9,LOC388789	-69539,342
chr20:5090912-5091217	chr20	+	5091204	5091266	True	NM_001009923,NM_182649,NM_001009925,NM_001009924,NR_028370,NM_014145	chr20,chr20,chr20,chr20,chr20,chr20	-,-,-,-,+,-	C20orf30,PCNA,C20orf30,C20orf30,PCNA-AS1,C20orf30	2517,9431,2517,2517,8965,2517
chr14:23834186-23834444	chr14	+	23834191	23834431	True	NM_032459,NM_172314,NM_005864,NM_022789	chr14,chr14,chr14,chr14	-,+,-,+	EFS,IL25,EFS,IL25	461,7586,461,7638
chr2:47402732-47402933	chr2	+	47402849	47402913	True	NM_001743,NM_002354	chr2,chr2	-,+	CALM2,EPCAM	877,193373
chr2:164553701-164553948	chr2	+	164553909	164553997	True	NM_012198,NM_018086	chr2,chr2	+,-	GCA,FIGN	-1353377,38566
chr20:32580105-32580696	chr20	+	32580294	32580698	True	NM_016732,NM_007367,NM_003908	chr20,chr20,chr20	+,+,-	RALY,RALY,EIF2S2	1033,1033,119437
chr12:105476508-105477684	chr12	+	105476677	105477685	True	NR_027752,NM_001034173,NM_015275	chr12,chr12,chr12	-,-,+	ALDH1L2,ALDH1L2,KIAA1033	706,706,23806
chr6:18396989-18397213	chr6	+	18396992	18397223	True	NM_182757,NM_003472	chr6,chr6	+,-	RNF144B,DEK	-9462,-132193
chr3:100051796-100052945	chr3	+	100051984	100052624	True	NM_020202,NM_014820	chr3,chr3	+,-	NIT2,TOMM70A	937,67656
chr7:33168139-33168762	chr7	+	33168287	33168638	True	NM_001033605,NM_001033604,NM_014451,NM_203288,NM_198428	chr7,chr7,chr7,chr7,chr7	+,+,+,-,+	BBS9,BBS9,BBS9,RP9,BBS9	513,513,513,-19285,513
chr9:138454080-138454571	chr9	+	138454154	138454306	True	NM_144654,NM_002571,NM_001018049	chr9,chr9,chr9	-,+,+	C9orf116,PAEP,PAEP	-62393,-601,-601
chr16:31191625-31191873	chr16	+	31191672	31191860	True	NM_004960,NM_001170937,NM_013258,NM_001170634,NR_028388	chr16,chr16,chr16,chr16,chr16	+,+,-,+,+	FUS,FUS,PYCARD,FUS,FUS	-292,-292,22287,-292,-292
chr8:145490823-145491035	chr8	+	145490828	145491012	True	NM_001008271,NM_015201,NM_001080514	chr8,chr8,chr8	+,-,+	SCXA,BOP1,SCXB	-276,24158,-276
chr8:145490823-145491035	chr8	+	145321742	145321926	False	NM_030974,NM_001008271,NM_001080514	chr8,chr8,chr8	-,+,+	SHARPIN,SCXA,SCXB	-162602,-276,-276
chr16:10274228-10274892	chr16	+	10274248	10274644	True	NM_024997,NM_001134408,NM_001134407,NM_000833	chr16,chr16,chr16,chr16	+,-,-,-	ATF7IP2,GRIN2A,GRIN2A,GRIN2A	248080,1330,1669,2017
chr3:46916787-46917358	chr3	+	46916807	46917355	True	NM_000316,NM_001184744,NM_000258	chr3,chr3,chr3	+,+,-	PTH1R,PTH1R,MYL3	1880,6383,-11834
chr19:48822224-48823959	chr19	+	48822229	48823891	True	NM_144577,NM_001425	chr19,chr19	-,+	CCDC114,EMP3	91,4737
chr12:46362579-46363970	chr12	+	46362733	46363277	True	NM_152641,NM_004719	chr12,chr12	+,-	ARID2,SCAF11	-239168,21183
chr22:41215573-41216510	chr22	+	41215593	41216376	True	NM_001204827,NM_006358	chr22,chr22	+,-	XPNPEP3,SLC25A17	36708,-201
chr11:62551937-62552957	chr11	+	62552193	62553008	True	NM_199337,NM_001080501	chr11,chr11	+,-	TMEM179B,TMEM223	1865,6531
chr2:241506427-241507372	chr2	+	241506479	241507344	True	NM_001033575,NM_017844,NM_018226,NM_016552	chr2,chr2,chr2,chr2	+,-,+,-	DUSP28,ANKMY1,RNPEPL1,ANKMY1	-7059,-9074,659,-9074
chr3:113250230-113251076	chr3	+	113250463	113251113	True	NM_144718,NM_017699	chr3,chr3	-,+	SPICE1,SIDT1	-16429,104
chr7:855679-856021	chr7	+	855698	856066	True	NM_025154,NM_001164759,NM_001171945,NM_001171944,NM_001171946	chr7,chr7,chr7,chr7,chr7	+,-,+,+,+	SUN1,PRKAR1B,SUN1,SUN1,SUN1	185,-88385,185,185,-555
chr14:77294450-77294727	chr14	+	77294628	77294762	True	NM_015305,NM_194287	chr14,chr14	-,+	ANGEL1,C14orf166B	-15345,-1955
chr9:94866619-94867280	chr9	+	94866661	94866893	True	NR_015444,NM_006415	chr9,chr9	+,-	LOC100128076,SPTLC1	28222,10849
chr17:27667436-27667784	chr17	+	27667635	27667813	True	NM_020791,NM_020772	chr17,chr17	+,-	TAOK1,NUFIP2	50129,-46469
chr14:102415432-102416032	chr14	+	102415559	102416035	True	NM_001376,NM_005348	chr14,chr14	+,-	DYNC1H1,HSP90AA1	14829,137527
chr12:6715328-6715551	chr12	+	6715336	6715512	True	NM_001273,NM_002046	chr12,chr12	-,+	CHD4,GAPDH	1089,-71730
chr18:12409324-12410210	chr18	+	12409566	12410178	True	NM_006796,NM_001142405,NM_006553	chr18,chr18,chr18	-,+,+	AFG3L2,SLMO1,SLMO1	-32291,-1723,-1723
chr1:12893720-12894492	chr1	+	12894194	12894400	True	NM_023014,NM_001146344	chr1,chr1	+,-	PRAMEF2,PRAMEF11	22540,-2930
chr1:12893720-12894492	chr1	+	12948952	12949158	False	NM_001009611,NM_001012276,NM_001039361	chr1,chr1,chr1	-,+,-	PRAMEF4,PRAMEF8,PRAMEF10	-2927,27291,8994
chr1:12893720-12894492	chr1	-	13418071	13418277	False	NM_001012276,NM_001098376,NM_001010890	chr1,chr1,chr1	-,+,+	PRAMEF8,PRAMEF15,PRAMEF9	-27306,2898,2898
chr1:12893720-12894492	chr1	-	13638868	13639074	False	NM_001012276,NM_001098376,NM_001010890	chr1,chr1,chr1	-,+,+	PRAMEF8,PRAMEF15,PRAMEF9	-27318,2898,2898
chr9:116109437-116110505	chr9	+	116109814	116110494	True	NM_001012361,NM_145241,NM_017688	chr9,chr9,chr9	-,-,+	WDR31,WDR31,BSPRY	-7194,-7194,1317
chr17:72428843-72429211	chr17	+	72428924	72429050	True	NM_022036,NM_018653,NM_001080466	chr17,chr17,chr17	+,+,-	GPRC5C,GPRC5C,BTBD17	-1308,785,-70966
chrX:17757891-17759237	chrX	+	17758094	17759178	True	NM_006746,NM_001037540,NR_033348,NM_001037535,NM_001037536	chrX,chrX,chrX,chrX,chrX	+,+,-,+,+	SCML1,SCML1,RAI2,SCML1,SCML1	-2560,-2560,119819,-2560,-2560
chr3:43659795-43660384	chr3	+	43659796	43660250	True	NM_016006,NM_001204832,NM_001204834,NM_001204831,NM_018075,NM_001204833	chr3,chr3,chr3,chr3,chr3,chr3	+,-,-,-,-,-	ABHD5,ANO10,ANO10,ANO10,ANO10,ANO10	72124,3374,3374,3374,3374,3374
chr1:12947366-12948473	chr1	+	12947867	12947938	True	NM_001009611,NM_001012276	chr1,chr1	-,+	PRAMEF4,PRAMEF8	-1842,28511
chr3:183946751-183947342	chr3	+	183946773	183947113	True	NM_005787,NM_138345	chr3,chr3	-,+	ALG3,VWA5B2	19696,1203
chr19:51671576-51672177	chr19	+	51671745	51672144	True	NR_002804,NM_145232	chr19,chr19	+,-	SIGLECP3,CTU1	-1211,-60098
chr1:156675885-156676275	chr1	+	156676105	156676175	True	NM_001199723,NM_001878,NM_001142560	chr1,chr1,chr1	-,-,+	CRABP2,CRABP2,RRNAD1	-497,-646,22087
chr1:10267641-10268505	chr1	+	10268021	10268403	True	NM_015074,NM_004401,NM_183416	chr1,chr1,chr1	+,-,+	KIF1B,DFFA,KIF1B	2360,264268,2360
chrX:52830069-52831718	chrX	+	52830284	52831461	True	NM_130775,NM_001009616	chrX,chrX	+,-	XAGE5,SPANXN5	9766,-3896
chrX:52830069-52831718	chrX	-	52474111	52475288	False	NR_033251,NM_001097592	chrX,chrX	-,+	XAGE1C,XAGE1A	57856,36472
chrX:52830069-52831718	chrX	+	52296825	52298002	False	NR_033257,NM_020411	chrX,chrX	+,-	XAGE1E,XAGE1D	-57857,-36462
chrX:52830069-52831718	chrX	-	52201171	52202348	False	NR_033251,NM_001097592	chrX,chrX	-,+	XAGE1C,XAGE1A	57856,36461
chr19:58794152-58795056	chr19	+	58794753	58794897	True	NM_021089,NM_130786	chr19,chr19	+,-	ZNF8,A1BG	-4493,70018
chr9:127113639-127114565	chr9	+	127113752	127114455	True	NM_002799,NR_027406	chr9,chr9	-,+	PSMB7,LOC100129034	63325,1296
chr5:137419608-137420150	chr5	+	137419631	137420121	True	NM_016603,NM_058244	chr5,chr5	-,+	FAM13B,WNT8A	-50829,84
chr9:130532568-130532877	chr9	+	130532594	130532876	True	NM_001142532,NR_036055,NM_001142531,NM_005489,NM_170600	chr9,chr9,chr9,chr9,chr9	-,+,-,-,-	SH2D3C,MIR2861,SH2D3C,SH2D3C,SH2D3C	-7897,15320,-7875,795,8222
chr22:44207082-44207949	chr22	+	44207377	44207829	True	NM_025225,NM_198856,NM_022785	chr22,chr22,chr22	+,-,-	PNPLA3,EFCAB6,EFCAB6	111789,438,438
chr12:50222473-50223873	chr12	+	50222827	50223533	True	NM_001037806,NR_027500,NR_027501,NR_027499	chr12,chr12,chr12,chr12	-,+,+,+	NCKAP5L,LOC100286844,LOC100286844,LOC100286844	-619,-552,-552,-552
chrX:15807424-15808245	chrX	+	15807760	15808287	True	NR_002725,NM_005089	chrX,chrX	-,+	INE2,ZRSR2	-2048,286
chr9:136607358-136608997	chr9	+	136607799	136608500	True	NM_007101,NM_000787,NM_001134707	chr9,chr9,chr9	-,+,-	SARDH,DBH,SARDH	-2722,-106372,-4320
chr12:96794505-96794838	chr12	+	96794580	96794876	True	NM_001170464,NM_002595,NM_005230	chr12,chr12,chr12	-,-,+	CDK17,CDK17,ELK3	-214,-214,-206424
chr1:33169280-33170857	chr1	+	33169377	33170728	True	NM_030786,NM_001161708,NM_020888	chr1,chr1,chr1	-,-,+	SYNC,SYNC,KIAA1522	-1016,-1016,36783
chr1:202093808-202094147	chr1	+	202093814	202094010	True	NM_004767,NM_138795	chr1,chr1	+,-	GPR37L1,ARL8A	-1836,19906
chrY:26761188-26762941	chrY	+	26761355	26762865	True	NM_020364,NM_004678,NM_001002760,NM_001002761	chrY,chrY,chrY,chrY	-,+,+,+	DAZ3,BPY2,BPY2B,BPY2C	196824,1285,1285,1285
chrY:26761188-26762941	chrY	+	25127614	25129124	False	NM_004678,NM_001002760,NM_001002761,NM_004081	chrY,chrY,chrY,chrY	+,+,+,-	BPY2,BPY2B,BPY2C,DAZ1	1285,1285,1285,216165
chrY:26761188-26762941	chrY	-	27199536	27201046	False	NM_004678,NM_001002760,NM_001002761,NM_001005786	chrY,chrY,chrY,chrY	-,-,-,+	BPY2,BPY2B,BPY2C,DAZ2	-1285,-1285,-1285,-219597
chr21:45077118-45077728	chr21	+	45077269	45077595	True	NM_015056,NM_007031	chr21,chr21	+,-	RRP1B,HSF2BP	1836,1829
chr1:63935088-63935589	chr1	+	63935313	63935438	True	NM_032437,NM_014288	chr1,chr1	+,-	EFCAB7,ITGB3BP	53574,53458
chr20:43579923-43581257	chr20	+	43579927	43581281	True	NM_006809,NM_006282	chr20,chr20	-,+	TOMM34,STK4	7883,13838
chr1:110751118-110751385	chr1	+	110751117	110751431	True	NR_036437,NM_001039574,NR_036595,NM_004978	chr1,chr1,chr1,chr1	+,+,-,+	KCNC4,KCNC4,LOC440600,KCNC4	1904,1904,130412,1904
chr5:140782791-140782996	chr5	+	140782809	140783029	True	NM_018925,NM_032090,NM_032100,NM_018921,NM_032099,NM_032089,NM_018926,NM_005642,NM_018913	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,+,-,+	PCDHGB5,PCDHGA10,PCDHGB6,PCDHGA9,PCDHGB5,PCDHGA9,PCDHGB6,TAF7,PCDHGA10	-5165,9713,4740,-340,-5165,-340,4740,-82458,9713
chr10:135191533-135191772	chr10	+	135191740	135191820	True	NM_207127,NR_037509,NM_004092,NM_152911,NM_207128	chr10,chr10,chr10,chr10,chr10	+,-,-,+,+	PAOX,MIR3944,ECHS1,PAOX,PAOX	920,-6573,-4832,920,920
chr2:127865486-127865989	chr2	+	127865506	127865926	True	NM_000312,NM_139350,NM_004305,NM_139347,NM_139346,NM_139345,NM_139344,NM_139343,NM_139351,NM_139349,NM_139348	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-,-,-,-,-,-	PROC,BIN1,BIN1,BIN1,BIN1,BIN1,BIN1,BIN1,BIN1,BIN1,BIN1	310069,-642,-642,-642,-642,-642,-642,-642,-642,-642,-642
chr5:159431505-159432530	chr5	+	159431737	159432529	True	NM_003314,NM_052927	chr5,chr5	+,-	TTC1,PWWP2A	3650,113973
chr15:44093427-44094791	chr15	+	44093483	44094441	True	NM_016400,NM_001033517,NM_001199885,NR_037673,NR_037672,NM_001199878,NM_001199876,NR_031695,NM_001199875,NM_001018108	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,-,+,+,+,+,+,-,+,+	C15orf63,SERINC4,C15orf63,SERF2-C15ORF63,SERF2,SERF2,SERF2,MIR1282,SERF2,SERF2	-916,-1228,-916,-9361,-9361,-8960,-9361,-7526,-9361,-9495
chr17:19015830-19016154	chr17	+	19015909	19015989	True	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	14792,-65573
chr4:88311467-88312115	chr4	+	88311584	88312144	True	NM_024047,NM_016245	chr4,chr4	+,-	NUDT9,HSD17B11	31590,361
chr17:28885579-28885975	chr17	+	28885586	28885828	True	NM_206832,NM_015594	chr17,chr17	-,+	TMIGD1,TBC1D29	-224521,755
chr19:15083777-15084309	chr19	+	15083782	15084357	True	NM_005071,NM_012377	chr19,chr19	-,+	SLC1A6,OR7C2	-52,-31532
chr7:6682882-6684141	chr7	+	6682924	6684154	True	NM_017560,NM_006956	chr7,chr7	+,-	ZNF853,ZNF12	-27448,62462
chr19:41303587-41303899	chr19	+	41303598	41303728	True	NM_053046,NM_198476,NM_080732	chr19,chr19,chr19	+,-,+	EGLN2,C19orf54,EGLN2	1605,-47770,1319
chr18:55821172-55822871	chr18	+	55821350	55822895	True	NM_005603,NM_001144965,NM_001144971,NM_001144969,NM_001144968	chr18,chr18,chr18,chr18,chr18	-,+,+,+,+	ATP8B1,NEDD4L,NEDD4L,NEDD4L,NEDD4L	-351023,-4843,-4843,-4843,-4843
chr9:139921232-139921532	chr9	+	139921237	139921525	True	NM_004479,NM_001606,NM_212533,NM_207511	chr9,chr9,chr9,chr9	-,-,-,+	FUT7,ABCA2,ABCA2,C9orf139	5817,1265,1899,390
chr19:8640863-8641617	chr19	+	8641305	8641469	True	NM_012335,NM_031203	chr19,chr19	-,+	MYO1F,HNRNPM	912,-131553
chr1:100110958-100111420	chr1	+	100110979	100111359	True	NM_017734,NR_030382	chr1,chr1	+,-	PALMD,MIR548D1	71,67204
chr5:32712675-32712963	chr5	+	32712770	32712936	True	NM_001204376,NM_000908,NM_001204375,NM_016107	chr5,chr5,chr5,chr5	+,+,+,-	NPR3,NPR3,NPR3,ZFR	-2078,-1383,-1383,-267926
chr2:165812038-165813798	chr2	+	165812166	165813637	True	NM_001040142,NM_001199148,NM_173512	chr2,chr2,chr2	+,-,-	SCN2A,SLC38A11,SLC38A11	282274,-131,-131
chr3:36436342-36438056	chr3	+	36436547	36438084	True	NM_003149,NM_033403	chr3,chr3	+,-	STAC,DCLK3	-14501,343318
chr8:1924055-1924322	chr8	+	1924118	1924352	True	NR_033895,NM_014867	chr8,chr8	-,+	LOC286083,KBTBD11	-673291,-2125
chr4:170537723-170538980	chr4	+	170538079	170538655	True	NM_001199398,NM_001199399,NM_001829,NM_001199397,NM_012224,NM_173872,NM_001199400	chr4,chr4,chr4,chr4,chr4,chr4,chr4	-,-,+,-,-,+,-	NEK1,NEK1,CLCN3,NEK1,NEK1,CLCN3,NEK1	-4301,-4301,3066,-4301,-4301,3066,-4301
chr1:151429217-151430118	chr1	+	151429425	151430016	True	NM_001194937,NM_020770,NM_015100,NM_001194938,NM_145796	chr1,chr1,chr1,chr1,chr1	-,+,-,-,-	POGZ,CGN,POGZ,POGZ,POGZ	1975,53845,1975,1975,1975
chr3:11687300-11688209	chr3	+	11687466	11688258	True	NM_001128219,NM_003178	chr3,chr3	-,+	VGLL4,SYN2	-2068,357603
chr5:193403-193994	chr5	+	193760	193972	True	NM_145265,NM_001080478	chr5,chr5	-,+	CCDC127,LRRC14B	24375,-2185
chr15:40078790-40079511	chr15	+	40078840	40079296	True	NM_001013703,NM_152597	chr15,chr15	+,-	EIF2AK4,FSIP1	147050,-3801
chr19:13859503-13859743	chr19	+	13859502	13859778	True	NR_036515,NM_030818	chr19,chr19	-,+	LOC284454,CCDC130	87375,-800
chr13:34443928-34444801	chr13	+	34443950	34444842	True	NM_181558,NM_178006	chr13,chr13	+,-	RFC3,STARD13	-51804,-584049
chr1:220218768-220219358	chr1	+	220218983	220219234	True	NM_004446,NM_018060	chr1,chr1	-,+	EPRS,IARS2	821,48220
chr10:63212633-63212844	chr10	+	63212644	63212866	True	NM_178505,NM_173554	chr10,chr10	-,+	TMEM26,C10orf107	392,209852
chr19:39614565-39615359	chr19	+	39614801	39615303	True	NM_001014832,NM_001014831,NM_001014835,NM_001014834,NM_005884,NM_001080468	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,-	PAK4,PAK4,PAK4,PAK4,PAK4,SYCN	1116,1116,1116,1116,1116,79653
chr8:22854537-22855743	chr8	+	22854839	22855691	True	NM_015178,NM_001160037,NM_001160036,NM_144962	chr8,chr8,chr8,chr8	+,+,+,-	RHOBTB2,RHOBTB2,RHOBTB2,PEBP4	1400,-1529,-9960,-69418
chr16:67678165-67678625	chr16	+	67678549	67678641	True	NM_001013838,NM_001082486	chr16,chr16	+,-	RLTPR,ACD	388,16127
chr20:54935347-54936752	chr20	+	54935549	54936643	True	NM_003600,NM_080821	chr20,chr20	-,+	AURKA,C20orf108	30758,-1619
chr3:266717-267664	chr3	+	266941	267423	True	NM_000564,NM_006614	chr3,chr3	-,+	IL5RA,CHL1	2884689,-28349
chr4:84241818-84243736	chr4	+	84242013	84243465	True	NM_001199830,NM_016067	chr4,chr4	-,+	HPSE,MRPS18C	12551,133652
chr15:25226742-25228286	chr15	+	25226970	25228159	True	NR_022008,NR_022011,NM_130838,NR_001292,NR_001293,NR_001294	chr15,chr15,chr15,chr15,chr15,chr15	+,+,-,+,+,+	PAR5,PAR-SN,UBE3A,SNORD108,SNORD107,SNORD64	1847,-38,422544,3912,-38,2087
chr11:64054466-64055276	chr11	+	64054468	64055112	True	NM_020155,NM_001177358,NM_001170880,NM_004322,NM_001170881,NM_001170726,NM_033310,NM_032989	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,-,+,+,+,-	GPR137,GPR137,GPR137,BAD,GPR137,GPR137,KCNK4,BAD	-937,-2236,-937,-2292,-2234,-2708,3680,-2292
chrX:12156145-12156530	chrX	+	12156149	12156493	True	NM_006125,NM_014728	chrX,chrX	-,+	ARHGAP6,FRMPD4	-472328,91
chr8:59405960-59406278	chr8	+	59405982	59406093	True	NM_000780,NM_001007067	chr8,chr8	-,+	CYP7A1,SDCBP	6684,59634
chr17:4632385-4634326	chr17	+	4632398	4634206	True	NM_001100812,NM_001136046,NM_032265,NM_001001683,NM_022059	chr17,chr17,chr17,chr17,chr17	-,+,+,+,-	CXCL16,ZMYND15,ZMYND15,MED11,CXCL16	9069,9112,9130,516,9069
chr8:31498295-31498537	chr8	+	31498351	31498574	True	NM_013962,NM_001015508	chr8,chr8	+,-	NRG1,PURG	-1134,-607120
chr9:133811393-133811963	chr9	+	133811415	133811889	True	NM_001145106,NM_032843,NM_006059	chr9,chr9,chr9	-,-,+	FIBCD1,FIBCD1,LAMC3	2616,2400,72614
chr16:21964338-21964676	chr16	+	21964360	21964638	True	NM_173806,NM_003366	chr16,chr16	-,+	PDZD9,UQCRC2	47843,2
chr20:48549656-48549970	chr20	+	48549822	48549972	True	NM_006038,NM_018683	chr20,chr20	-,+	SPATA2,RNF114	-17742,2941
chr19:50846084-50846742	chr19	+	50846569	50846689	True	NM_007121,NR_002798	chr19,chr19	+,-	NR1H2,NAPSB	32995,1366
chr4:132464000-132465025	chr4	+	132464196	132465069	True	NM_144643,NM_020815	chr4,chr4	-,+	SCLT1,PCDH10	-2449432,1605400
chr1:116652844-116653387	chr1	+	116652855	116653425	True	NM_152367,NM_005599	chr1,chr1	+,-	MAB21L3,NHLH2	950,-269108
chr2:65582706-65583845	chr2	+	65582856	65583846	True	NM_005722,NM_001128210	chr2,chr2	+,-	ACTR2,SPRED2	-128091,10136
chr5:56218936-56219581	chr5	+	56218981	56219609	True	NM_001171990,NM_152622	chr5,chr5	+,-	C5orf35,MIER3	-13945,28395
chr18:3214675-3215053	chr18	+	3214828	3214958	True	NM_019856,NM_006471,NM_003803	chr18,chr18,chr18	-,+,-	MYOM1,MYL12A,MYOM1	5198,32569,5198
chr1:38260109-38260325	chr1	+	38260139	38260257	True	NM_001031740,NM_152496,NM_001113482,NM_024640	chr1,chr1,chr1,chr1	+,+,+,-	MANEAL,MANEAL,MANEAL,YRDC	-416,902,-416,13658
chr15:27113764-27115560	chr15	+	27113764	27115166	True	NM_001165037,NM_000810,NM_021912	chr15,chr15,chr15	+,+,-	GABRA5,GABRA5,GABRB3	-1542,-1949,-94829
chr19:15489175-15489395	chr19	+	15489176	15489426	True	NM_005858,NR_031716	chr19,chr19	-,+	AKAP8,MIR1470	1227,70932
chr4:155411277-155411493	chr4	+	155411277	155411531	True	NM_001142552,NM_001142553,NM_001184741	chr4,chr4,chr4	-,-,+	DCHS2,DCHS2,FGB	1396,1449,72600
chrX:40141573-40142062	chrX	+	40141599	40142100	True	NM_001123384,NM_005765	chrX,chrX	-,+	BCOR,ATP6AP2	-105017,298115
chr6:10413914-10415157	chr6	+	10413982	10415198	True	NM_001042425,NM_001032280,NM_003220,NR_033910	chr6,chr6,chr6,chr6	-,-,-,+	TFAP2A,TFAP2A,TFAP2A,LOC100130275	4649,-1375,322,-1485
chr16:75530336-75531076	chr16	+	75530547	75530722	True	NM_007285,NM_021615	chr16,chr16	+,-	GABARAPL2,CHST6	69526,-1621
chr7:102038348-102038822	chr7	+	102038626	102038716	True	NM_024653,NM_001146210	chr7,chr7	+,-	PRKRIP1,SPDYE6	-1880,-41737
chr13:113631559-113632242	chr13	+	113631740	113632163	True	NM_024979,NR_034002,NM_001112732	chr13,chr13,chr13	+,-,+	MCF2L,MCF2L-AS1,MCF2L	1491,-8788,-9034
chr1:53794243-53794483	chr1	+	53794252	53794478	True	NM_004631,NM_033300,NM_033067,NM_001018054,NM_017522	chr1,chr1,chr1,chr1,chr1	-,-,+,-,-	LRP8,LRP8,DMRTB1,LRP8,LRP8	-526,-431,130593,-526,-526
chr4:155526144-155526513	chr4	+	155526171	155526523	True	NM_021870,NM_005141,NM_000509	chr4,chr4,chr4	-,+,-	FGG,FGB,FGG	7429,-42099,7429
chr15:69711310-69712323	chr15	+	69711508	69712260	True	NM_138555,NM_004856,NM_006305	chr15,chr15,chr15	+,+,-	KIF23,KIF23,ANP32A	-4871,-4871,-598247
chrX:71374639-71375198	chrX	+	71374799	71375029	True	NM_207422,NM_001024455	chrX,chrX	+,-	FLJ44635,RGAG4	-10816,-23048
chr15:75229668-75229868	chr15	+	75229696	75229856	True	NM_002435,NM_004255	chr15,chr15	+,-	MPI,COX5A	-47343,689
chr1:200705286-200707126	chr1	+	200705666	200707114	True	NM_203459,NM_001031725	chr1,chr1	+,-	CAMSAP1L1,DDX59	1571,-66540
chr15:25423402-25424728	chr15	+	25423531	25424753	True	NR_003351,NR_003358,NR_003304,NM_130838,NR_003344,NR_003298,NR_003299,NR_001291,NR_003300,NR_003301,NR_003302,NR_003303,NR_003296,NR_003297,NR_003294,NR_003295	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,-,+,+,+,+,+,+,+,+,+,+,+,+	SNORD115-36,SNORD115-43,SNORD115-12,UBE3A,SNORD115-29,SNORD115-6,SNORD115-7,SNORD115-1,SNORD115-8,SNORD115-9,SNORD115-10,SNORD115-11,SNORD115-4,SNORD115-5,SNORD115-2,SNORD115-3	9807,9807,-146,225950,9807,890,2778,-7712,4699,-146,-146,9807,-1603,-149,-5800,-3508
chr1:225650349-225651886	chr1	+	225650428	225651824	True	NM_194442,NM_001130440	chr1,chr1	-,+	LBR,SRP9	-33871,313690
chr4:106689480-106691209	chr4	+	106690491	106691154	True	NM_001031720,NM_020395	chr4,chr4	+,-	GSTCD,INTS12	-58583,-60610
chr1:236954520-236956202	chr1	+	236955155	236955873	True	NM_018072,NM_000254	chr1,chr1	-,+	HEATR1,MTR	-187314,2707
chr14:94465587-94465814	chr14	+	94465683	94465843	True	NR_024183,NR_024182,NM_001202429,NR_024184	chr14,chr14,chr14,chr14	+,+,-,+	C14orf48,C14orf48,ASB2,C14orf48	-2092,-2118,-22607,-2092
chr10:47728977-47729863	chr10	+	47729347	47729419	True	NR_024495,NM_001630	chr10,chr10	-,+	LOC642826,ANXA8L2	-485853,17500
chr7:12610444-12610650	chr7	+	12610542	12610618	True	NM_001112706,NM_001135924	chr7,chr7	+,-	SCIN,VWDE	-390,-166690
chr2:208397638-208399119	chr2	+	208397718	208398945	True	NM_004379,NM_134442,NM_145280	chr2,chr2,chr2	+,+,-	CREB1,CREB1,METTL21A	-3164,-3164,90801
chr12:9818520-9818888	chr12	+	9818588	9818866	True	NM_001197317,NM_002258,NM_001197318,NM_001197319,NM_013269,NR_036693,NM_001004419	chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,-,+,+,+,+,+	CLEC2D,KLRB1,CLEC2D,CLEC2D,CLEC2D,CLEC2D,CLEC2D	3464,-58091,3441,3464,3441,3441,3442
chr17:72888280-72888513	chr17	+	72888332	72888528	True	NM_178128,NM_178160	chr17,chr17	-,+	FADS6,OTOP2	1227,31841
chr4:62362630-62364190	chr4	+	62362965	62363925	True	NM_015236,NM_001010874	chr4,chr4	+,-	LPHN3,TECRL	-178,2911310
chr9:139949935-139950244	chr9	+	139950016	139950198	True	NM_207309,NM_001246,NM_203468,NM_015392	chr9,chr9,chr9,chr9	+,-,-,-	UAP1L1,ENTPD2,ENTPD2,NPDC1	21754,-1511,-1511,-9340
chr1:211555465-211556063	chr1	+	211555464	211555905	True	NM_001164688,NR_026761	chr1,chr1	-,+	RD3,C1orf97	110409,191
chr4:332767-333706	chr4	+	332924	333744	True	NM_001137608,NM_003441	chr4,chr4	-,+	ZNF732,ZNF141	-42980,-1379
chr20:61487322-61487980	chr20	+	61487664	61487788	True	NM_006602,NM_080750	chr20,chr20	-,+	TCFL5,DPH3P1	5377,-11244
chr17:4689114-4689560	chr17	+	4689148	4689576	True	NM_002798,NM_001014985,NM_001144939,NM_001144941,NM_001144940,NM_182566	chr17,chr17,chr17,chr17,chr17,chr17	+,+,-,-,-,-	PSMB6,GLTPD2,VMO1,VMO1,VMO1,VMO1	9880,2677,203,203,203,203
chr20:17661405-17661610	chr20	+	17661446	17661542	True	NM_001042576,NM_001159495,NM_004587	chr20,chr20,chr20	-,+,-	RRBP1,BANF2,RRBP1	1436,12777,1436
chr5:138628554-138629238	chr5	+	138629054	138629284	True	NM_005847,NM_018834,NM_001194956,NM_001194955	chr5,chr5,chr5,chr5	-,+,+,+	SLC23A1,MATR3,MATR3,MATR3	89805,48,154,154
chr4:15709861-15710221	chr4	+	15709862	15710226	True	NM_004334,NR_036464	chr4,chr4	+,-	BST1,FBXL5	-5340,-52827
chr11:67810769-67811384	chr11	+	67811078	67811254	True	NM_030930,NM_006019,NM_006053	chr11,chr11,chr11	-,+,+	UNC93B1,TCIRG1,TCIRG1	-39485,-4667,-682
chr2:27347132-27347728	chr2	+	27347208	27347655	True	NM_032604,NM_001166240,NM_006569,NM_013388,NM_001166239	chr2,chr2,chr2,chr2,chr2	+,-,-,-,-	ABHD1,CGREF1,CGREF1,PREB,CGREF1	-602,-5213,-5213,9940,-5435
chr10:105112927-105113764	chr10	+	105112954	105113281	True	NM_006951,NM_032154,NM_001011663	chr10,chr10,chr10	+,-,-	TAF5,PCGF6,PCGF6	14442,-2063,-2063
chr15:23807293-23807521	chr15	+	23807298	23807542	True	NM_005664,NM_019066	chr15,chr15	+,-	MKRN3,MAGEL2	2911,85501
chr9:23826741-23827650	chr9	+	23826771	23827681	True	NM_022160,NM_004432,NM_001171197,NM_001171195	chr9,chr9,chr9,chr9	+,-,-,-	DMRTA1,ELAVL2,ELAVL2,ELAVL2	-1379984,-708,-5293,-4928
chr17:18951223-18952266	chr17	+	18951506	18952312	True	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	78469,-1170
chr17:18951223-18952266	chr17	-	19029204	19029663	False	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	1118,-78868
chr22:37881806-37882023	chr22	+	37881824	37882068	True	NM_001166343,NM_152243,NR_029413,NM_002405	chr22,chr22,chr22,chr22	-,+,-,-	MFNG,CDC42EP1,MFNG,MFNG	407,74402,460,460
chr8:119126044-119126659	chr8	+	119126261	119126562	True	NM_080651,NM_000127	chr8,chr8	+,-	MED30,EXT1	-593347,-2203
chr2:242812658-242813187	chr2	+	242812782	242813218	True	NM_173821,NM_005018	chr2,chr2	+,-	C2orf85,PDCD1	-947,-11724
chr16:48262429-48263414	chr16	+	48262594	48263368	True	NM_145186,NM_033151,NM_032583,NM_031490	chr16,chr16,chr16,chr16	-,-,-,+	ABCC11,ABCC11,ABCC11,LONP2	5772,2866,5772,14842
chr18:2653510-2654924	chr18	+	2653577	2654952	True	NR_033754,NM_015295	chr18,chr18	-,+	LOC645158,SMCHD1	-346,933
chr7:143893125-143893350	chr7	+	143893142	143893264	True	NM_001003702,NM_198495	chr7,chr7	-,+	ARHGEF35,CTAGE4	-351,-12645
chr7:143893125-143893350	chr7	+	143991722	143991844	False	NR_002158,NR_033942,NR_002157	chr7,chr7,chr7	+,-,+	OR2A20P,LOC728377,OR2A9P	4621,-8626,4769
chr7:143893125-143893350	chr7	-	144051960	144052082	False	NM_005435,NM_001080413	chr7,chr7	+,-	ARHGEF5,NOBOX	406,48754
chr5:176836334-176836693	chr5	+	176836347	176836617	True	NM_001029886,NM_000505,NM_001004105	chr5,chr5,chr5	-,-,+	PFN3,F12,GRK6	-8710,10,17069
chr3:184281975-184283555	chr3	+	184282079	184283377	True	NM_022149,NM_004443	chr3,chr3	-,+	MAGEF1,EPHB3	146509,-2543
chr19:40933280-40933481	chr19	+	40933292	40933365	True	NM_020971,NM_013376	chr19,chr19	+,-	SPTBN4,SERTAD1	39760,-1360
chr2:16846914-16847186	chr2	+	16847029	16847141	True	NM_005378,NM_030797	chr2,chr2	+,-	MYCN,FAM49A	-766397,43
chr6:15660644-15660982	chr6	+	15660651	15660946	True	NM_183040,NR_036448,NM_004973,NM_032122	chr6,chr6,chr6,chr6	-,-,+,-	DTNBP1,DTNBP1,JARID2,DTNBP1	2394,2394,-414175,2394
chr20:44597215-44598042	chr20	+	44597299	44597935	True	NM_022104,NM_022095	chr20,chr20	+,-	PCIF1,ZNF335	-34033,2948
chr3:158288956-158289158	chr3	+	158288998	158289124	True	NM_001130157,NM_001130156,NM_020169,NM_001195433,NM_001195432,NM_022443,NM_001195434	chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,-,+,+,+,+	MLF1,MLF1,LXN,MLF1,MLF1,MLF1,MLF1	-96,-96,101408,-96,-96,-96,-96
chr10:114612836-114613948	chr10	+	114612948	114613996	True	NM_022494,NR_015409	chr10,chr10	-,+	ZDHHC6,LOC143188	-406276,-2326
chr3:196439707-196440895	chr3	+	196439889	196440932	True	NM_017861,NM_032898,NM_001166304	chr3,chr3,chr3	+,-,+	PIGX,C3orf34,PIGX	-695,-766,-695
chr13:43565512-43565899	chr13	+	43565753	43565950	True	NM_001002264,NM_013238,NM_033255	chr13,chr13,chr13	-,+,-	EPSTI1,DNAJC15,EPSTI1	480,31411,480
chr11:2442988-2443235	chr11	+	2443096	2443194	True	NM_005706,NM_014555	chr11,chr11	+,-	TSSC4,TRPM5	-19624,1131
chr22:26908539-26909623	chr22	+	26908728	26909650	True	NM_001013694,NM_001008697,NM_012143	chr22,chr22,chr22	+,-,-	SRRD,TFIP11,TFIP11	-28937,-291,-291
chr3:122745132-122745392	chr3	+	122745340	122745420	True	NM_006810,NM_001031702	chr3,chr3	+,-	PDIA5,SEMA5B	40435,1206
chr17:66549415-66550535	chr17	+	66549541	66550579	True	NR_027751,NM_212472	chr17,chr17	-,+	FAM20A,PRKAR1A	4039,-41063
chr8:1710508-1711244	chr8	+	1710691	1711220	True	NR_033895,NM_018941	chr8,chr8	-,+	LOC286083,CLN8	-459864,649
chr10:46579340-46581055	chr10	+	46579558	46581017	True	NR_027632,NM_001042357	chr10,chr10	+,-	FAM35B,PTPN20B	316623,39092
chr10:46579340-46581055	chr10	+	48766452	48767911	False	NM_001042357,NM_153034	chr10,chr10	-,+	PTPN20B,ZNF488	39125,-411425
chr10:46579340-46581055	chr10	+	49286983	49288442	False	NR_029396,NM_002750	chr10,chr10	-,+	LOC399753,MAPK8	-47325,321244
chr12:50899050-50899258	chr12	+	50899122	50899286	True	NM_173602,NM_001145475	chr12,chr12	+,-	DIP2B,FAM186A	-405,-108717
chr10:18239889-18240314	chr10	+	18240017	18240355	True	NM_001145195,NM_014241,NM_152725	chr10,chr10,chr10	+,-,+	SLC39A12,PTPLA,SLC39A12	412,-580644,412
chr22:19278034-19278475	chr22	+	19278058	19278405	True	NM_001835,NM_007098,NM_003776	chr22,chr22,chr22	-,-,+	CLTCL1,CLTCL1,MRPL40	891,891,141630
chr14:90721241-90722909	chr14	+	90721448	90722883	True	NM_017970,NM_002802	chr14,chr14	-,+	C14orf102,PSMC1	75446,10
chr12:95603725-95604035	chr12	+	95603724	95604084	True	NM_017599,NM_018351	chr12,chr12	+,-	VEZT,FGD6	7437,7206
chr3:119190269-119190804	chr3	+	119190336	119190826	True	NM_018266,NM_152305,NR_024265	chr3,chr3,chr3	-,+,+	TMEM39A,POGLUT1,POGLUT1	-7865,-2609,-2609
chr15:25489511-25490006	chr15	+	25489737	25490045	True	NR_003353,NR_003358,NM_130838,NR_003344,NR_003352,NR_003351,NR_003357,NR_003356,NR_003355,NR_003354,NR_003302,NR_003303,NR_003359	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,-,+,+,+,+,+,+,+,+,+,+	SNORD115-38,SNORD115-43,UBE3A,SNORD115-29,SNORD115-37,SNORD115-36,SNORD115-42,SNORD115-41,SNORD115-40,SNORD115-39,SNORD115-10,SNORD115-11,SNORD115-44	-4803,4299,160658,4299,-6655,4299,2446,579,-1027,-2895,2446,4299,5960
chr15:65912711-65914182	chr15	+	65912847	65914223	True	NM_030800,NM_001136043,NM_004727	chr15,chr15,chr15	-,-,+	C15orf44,C15orf44,SLC24A1	-9440,-9378,46
chr14:93770549-93770941	chr14	+	93770589	93770679	True	NM_020818,NM_001002860	chr14,chr14	+,-	KIAA1409,BTBD7	28885,28768
chr17:10610613-10611600	chr17	+	10610816	10611426	True	NM_004589,NM_020233	chr17,chr17	-,+	SCO1,C17orf48	-9931,-9940
chr7:5572278-5572801	chr7	+	5572322	5572784	True	NM_001101,NM_003088	chr7,chr7	-,+	ACTB,FSCN1	-2090,59669
chrY:24453047-24453612	chrY	+	24453165	24453581	True	NR_001541,NR_002193,NM_152585	chrY,chrY,chrY	-,+,+	TTTY5,RBMY2FP,RBMY1F	-8142,1424,1428
chr16:4837170-4838904	chr16	+	4837332	4838943	True	NR_029454,NR_029455,NM_144605,NM_001154458,NR_029453	chr16,chr16,chr16,chr16,chr16	+,+,-,-,+	LOC440335,LOC440335,SEPT12,SEPT12,LOC440335	-194,6435,-201,-201,225
chr8:27185291-27186833	chr8	+	27185489	27186793	True	NM_173176,NM_173175,NM_004103,NM_171982	chr8,chr8,chr8,chr8	+,+,+,-	PTK2B,PTK2B,PTK2B,TRIM35	-2545,-2460,-5622,-16655
chr6:88111510-88112939	chr6	+	88111550	88112945	True	NR_026784,NM_001031743,NM_198568	chr6,chr6,chr6	+,+,-	C6orf164,C6orf165,GJB7	-4767,4744,-72554
chr3:150264168-150264455	chr3	+	150264238	150264468	True	NM_014445,NM_032025	chr3,chr3	-,+	SERP1,EIF2A	10,105
chr15:56208022-56208958	chr15	+	56208178	56208987	True	NM_198400,NM_198524	chr15,chr15	-,+	NEDD4,TEX9	393,448656
chr15:45925814-45926228	chr15	+	45925919	45926065	True	NM_021199,NM_013309	chr15,chr15	+,-	SQRDL,SLC30A4	1190,-110917
chrX:43832050-43832523	chrX	+	43832096	43832544	True	NM_000266,NM_000240	chrX,chrX	-,+	NDP,MAOA	427,-316740
chr19:57183458-57184152	chr19	+	57183752	57183893	True	NM_001193628,NM_001005850	chr19,chr19	+,-	LOC147670,ZNF835	-29276,404
chr21:26735556-26737088	chr21	+	26735556	26736898	True	NR_024027,NR_001458	chr21,chr21	-,+	NCRNA00158,MIR155HG	67165,197558
chr14:55883116-55883941	chr14	+	55883207	55883977	True	NM_014924,NM_152231	chr14,chr14	-,+	ATG14,FBXO34	-4631,-144387
chr3:46410430-46411081	chr3	+	46410435	46411098	True	NM_001199149,NM_000579,NM_001100168	chr3,chr3,chr3	-,+,+	LTF,CCR5,CCR5	94124,534,534
chr11:65104281-65104830	chr11	+	65104549	65104647	True	NM_006268,NM_001077241	chr11,chr11	+,-	DPF2,SLC25A45	-3260,45545
chr11:87882366-87882967	chr11	+	87882471	87883008	True	NM_022337,NM_000372	chr11,chr11	-,+	RAB38,TYR	25680,1028031
chr4:170682018-170682920	chr4	+	170682222	170682794	True	NM_173872,NM_017867	chr4,chr4	+,-	CLCN3,C4orf27	-140553,-3129
chr9:32995808-32996880	chr9	+	32996215	32996820	True	NM_001195254,NR_036577,NM_001195252,NM_001195251,NM_001195250,NR_036579,NR_036578,NM_001195248,NM_001195249,NM_175069,NM_001539,NM_175073,NR_036576	chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,-,-,-,-,-,-,-,-,-,+,-,-	APTX,APTX,APTX,APTX,APTX,APTX,APTX,APTX,APTX,APTX,DNAJA1,APTX,APTX	4841,4870,4870,4870,4870,4805,4841,4870,4805,4870,28388,4870,4870
chr22:19703938-19704920	chr22	+	19703967	19704531	True	NM_024627,NM_001009939,NM_002688,NR_037611,NR_037612,NM_000407	chr22,chr22,chr22,chr22,chr22,chr22	-,+,+,+,+,+	C22orf29,SEPT5,SEPT5,SEPT5-GP1BB,SEPT5-GP1BB,GP1BB	137890,1426,-2031,211,1460,6534
chr10:104405564-104405795	chr10	+	104405602	104405774	True	NM_030912,NM_004311	chr10,chr10	+,-	TRIM8,ARL3	-1401,68466
chr8:124098787-124099169	chr8	+	124098854	124098920	True	NM_024295,NM_145647	chr8,chr8	-,+	DERL1,WDR67	-44206,-13985
chr17:45091381-45092464	chr17	+	45091783	45091849	True	NM_203400,NM_054022	chr17,chr17	-,+	RPRML,GOSR2	-35169,-91354
chr10:97800456-97801261	chr10	+	97800456	97801070	True	NM_001134375,NM_019084,NR_036113,NM_001134376	chr10,chr10,chr10,chr10	+,+,-,+	CCNJ,CCNJ,MIR3157,CCNJ	2088,2088,23136,2088
chr7:137778980-137780362	chr7	+	137779748	137780192	True	NM_005989,NM_194071	chr7,chr7	+,-	AKR1D1,CREB3L2	-18622,-92902
chr2:113729776-113730624	chr2	+	113729883	113730572	True	NM_019618,NM_014438	chr2,chr2	+,-	IL1F9,IL1F8	5033,79931
chrX:64770730-64770933	chrX	+	64770830	64770948	True	NM_001010888,NR_033742	chrX,chrX	+,-	ZC3H12B,FKSG43	-62266,1403
chr11:68518106-68518341	chr11	+	68518156	68518218	True	NM_001039656,NM_015973,NM_004923	chr11,chr11,chr11	-,+,-	MTL5,GAL,MTL5	820,-66224,820
chr19:19247629-19248392	chr19	+	19247812	19248385	True	NM_017814,NM_003721	chr19,chr19	-,+	TMEM161A,RFXANK	932,54622
chr1:236564013-236565352	chr1	+	236564570	236565272	True	NM_145861,NM_019891,NM_080738	chr1,chr1,chr1	+,-,+	EDARADD,ERO1LB,EDARADD	-6942,-119231,-5906
chr1:20809993-20810620	chr1	+	20809997	20810583	True	NM_207334,NM_018584	chr1,chr1	+,-	FAM43B,CAMK2N1	68348,2195
chr3:12707331-12708293	chr3	+	12707625	12708192	True	NM_002880,NM_014160	chr3,chr3	-,+	RAF1,MKRN2	-1925,-109093
chr12:33140102-33140323	chr12	+	33140155	33140374	True	NM_004572,NM_012063	chr12,chr12	-,+	PKP2,DNM1L	-90375,-308069
chr5:40756048-40756411	chr5	+	40756086	40756419	True	NM_012382,NM_000958	chr5,chr5	-,+	TTC33,PTGER4	-14,-76105
chr7:100882407-100882611	chr7	+	100882548	100882610	True	NM_014343,NM_006349,NM_016068,NM_001185080	chr7,chr7,chr7,chr7	-,+,-,-	CLDN15,ZNHIT1,FIS1,CLDN15	-1321,-21614,5811,-447
chr11:111854001-111855125	chr11	+	111854123	111855017	True	NM_001885,NM_033425	chr11,chr11	-,+	CRYAB,DIXDC1	-71650,-6141
chr20:32152476-32152817	chr20	+	32152666	32152726	True	NM_005093,NM_001039709,NM_031231	chr20,chr20,chr20	+,+,-	CBFA2T2,CBFA2T2,NECAB3	-2547,-2547,109588
chrX:46404872-46405080	chrX	+	46404907	46405085	True	NM_001039891,NR_015378,NM_001190417,NM_001146291	chrX,chrX,chrX,chrX	-,+,-,-	ZNF674,LOC401588,ZNF674,ZNF674	-15,-30,-15,-15
chr17:4614933-4616371	chr17	+	4614977	4616139	True	NM_004313,NM_199004,NM_014389	chr17,chr17,chr17	+,+,-	ARRB2,ARRB2,PELP1	-1239,-1239,-7345
chr12:104444433-104444684	chr12	+	104444437	104444569	True	NM_013320,NM_031302	chr12,chr12	+,-	HCFC2,GLT8D2	13666,-522
chr8:37655084-37655349	chr8	+	37655274	37655348	True	NR_003671,NM_032777	chr8,chr8	-,+	LOC728024,GPR124	-49710,-924
chr5:63808966-63810540	chr5	+	63809026	63810361	True	NM_001029875,NM_173829	chr5,chr5	+,-	RGS7BP,SREK1IP1	-6625,254186
chr20:39317051-39317332	chr20	+	39317095	39317319	True	NM_003286,NM_005461	chr20,chr20	+,-	TOP1,MAFB	340142,607
chr11:73874525-73876088	chr11	+	73874906	73875650	True	NM_015531,NM_016147	chr11,chr11	-,+	C2CD3,PPME1	6464,6717
chr1:153603733-153604906	chr1	+	153603907	153604725	True	NM_001024210,NM_001024211,NM_001024212,NM_001024213,NM_006271,NM_015607,NM_005979	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,+,+,-	S100A13,S100A13,S100A13,S100A13,S100A1,CHTOP,S100A13	1894,-3790,-4163,-4383,-3092,1799,-3192
chr2:73959758-73960342	chr2	+	73960114	73960378	True	NM_001080474,NM_016058	chr2,chr2	+,-	C2orf78,TPRKB	50937,4189
chr1:218522112-218523728	chr1	+	218522112	218523776	True	NM_003238,NM_018040,NM_001135599	chr1,chr1,chr1	+,-,+	TGFB2,GPATCH2,TGFB2	-3489,-717703,-3489
chr21:37945521-37946973	chr21	+	37945717	37946905	True	NM_001146077,NM_009586	chr21,chr21	-,+	CLDN14,SIM2	2018,125085
chr5:13944582-13946447	chr5	+	13944768	13946317	True	NM_007118,NM_001369	chr5,chr5	+,-	TRIO,DNAH5	197511,-179
chr6:28058065-28058843	chr6	+	28058068	28058814	True	NM_003447,NR_002936,NR_024063	chr6,chr6,chr6	+,-,+	ZNF165,LOC222699,ZSCAN12P1	-9638,127943,114
chr1:113931925-113932432	chr1	+	113931969	113932452	True	NM_006608,NM_152900,NM_001142782	chr1,chr1,chr1	-,+,+	PHTF1,MAGI3,MAGI3	369386,1022,1022
chr1:111491075-111491830	chr1	+	111491075	111491624	True	NM_000560,NM_001006945	chr1,chr1	+,-	CD53,C1orf103	-75409,14999
chr8:98657702-98658886	chr8	+	98657728	98658864	True	NM_033512,NM_178812	chr8,chr8	-,+	TSPYL5,MTDH	-367552,-1372
chr1:40150101-40150466	chr1	+	40150109	40150335	True	NM_203456,NM_016257	chr1,chr1	+,-	PPIE,HPCAL4	54181,6804
chr2:222811333-222812830	chr2	+	222811404	222812846	True	NM_153038,NM_001127366	chr2,chr2	+,-	CCDC140,PAX3	350019,350919
chr22:24648664-24649298	chr22	+	24648971	24649331	True	NM_001099782,NM_001099781,NM_004121,NR_003714	chr22,chr22,chr22,chr22	-,-,-,+	GGT5,GGT5,GGT5,POM121L9P	-7861,-7861,-7861,-1433
chr22:24648664-24649298	chr22	-	25053681	25053731	False	NR_024593,NR_024494	chr22,chr22	-,+	POM121L10P,BCRP3	1433,-24850
chr17:48587927-48588892	chr17	+	48588265	48588848	True	NM_032133,NM_001267	chr17,chr17	+,-	MYCBPAP,CHAD	-2578,-42038
chr2:168722224-168722968	chr2	+	168722362	168722942	True	NM_020981,NM_013233	chr2,chr2	+,-	B3GALT1,STK39	-47238,381215
chr10:127585531-127586451	chr10	+	127585615	127586412	True	NM_018180,NM_145235	chr10,chr10	-,+	DHX32,FANK1	-15731,-565
chr15:63450643-63450932	chr15	+	63450646	63450744	True	NM_016530,NM_015920	chr15,chr15	+,-	RAB8B,RPS27L	30983,-905
chr16:20803104-20804713	chr16	+	20803320	20804440	True	NM_080663,NM_001144924	chr16,chr16	-,+	ERI2,LOC81691	13413,13326
chr8:52796880-52797195	chr8	+	52796886	52797168	True	NM_052937,NM_005285	chr8,chr8	-,+	PCMTD1,NPBWR1	14617,1055299
chr17:46908269-46908618	chr17	+	46908395	46908461	True	NM_005831,NM_001130918	chr17,chr17	+,-	CALCOCO2,TTLL6	-74,-13926
chr8:86130983-86131698	chr8	+	86131095	86131593	True	NM_001099672,NM_001099673,NM_001099670,NM_001099671,NM_198584	chr8,chr8,chr8,chr8,chr8	-,-,-,-,+	C8orf59,C8orf59,C8orf59,C8orf59,CA13	1106,1106,1106,1106,26122
chr3:43021251-43021874	chr3	+	43021368	43021844	True	NM_004391,NM_001129908	chr3,chr3	-,+	CYP8B1,FAM198A	-103735,-660
chr1:145588871-145589338	chr1	+	145588895	145589315	True	NM_006099,NM_001012758	chr1,chr1	+,-	PIAS3,NUDT17	-12958,170
chr17:41909231-41910044	chr17	+	41909241	41910034	True	NR_003562,NM_001168324,NM_001932	chr17,chr17,chr17	-,+,-	MPP3,CD300LG,MPP3	563,14481,563
chr1:212733384-212734326	chr1	+	212733438	212734288	True	NM_001030287,NM_018664	chr1,chr1	+,-	ATF3,BATF3	4408,139089
chr2:96072405-96072632	chr2	+	96072423	96072629	True	NM_001164464,NM_016044	chr2,chr2	-,+	TRIM43B,FAHD2A	77900,-4031
chr2:96072405-96072632	chr2	+	96680591	96680646	False	NM_207328,NR_003698	chr2,chr2	-,+	GPAT2,LOC729234	20136,-4348
chr2:96072405-96072632	chr2	-	97756121	97756327	False	NM_199336,NM_001164315	chr2,chr2	-,+	FAHD2B,ANKRD36	4310,22905
chr3:53526894-53528043	chr3	+	53526924	53527846	True	NM_001128840,NM_001128839,NM_000720,NM_018403	chr3,chr3,chr3,chr3	+,+,+,-	CACNA1D,CACNA1D,CACNA1D,DCP1A	1184,1184,1184,-145270
chr6:14882538-14883067	chr6	+	14882541	14883115	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	363411,780224
chr17:27400827-27401102	chr17	+	27400876	27401029	True	NM_016518,NM_004740	chr17,chr17	+,-	PIPOX,TIAF1	-31009,1649
chr5:10637239-10638026	chr5	+	10637291	10637757	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-72908,123680
chr5:36877721-36878977	chr5	+	36877801	36878927	True	NM_133433,NM_015384,NM_023073	chr5,chr5,chr5	+,+,-	NIPBL,NIPBL,C5orf42	-997,-997,370654
chr20:60877065-60877277	chr20	+	60877072	60877166	True	NM_007002,NM_175573,NM_005560	chr20,chr20,chr20	+,+,-	ADRM1,ADRM1,LAMA5	860,860,65252
chr19:45657806-45658137	chr19	+	45657814	45657996	True	NM_212550,NM_198478	chr19,chr19	+,-	BLOC1S3,NKPD1	24006,5462
chr2:43821614-43822931	chr2	+	43821753	43822888	True	NM_022065,NM_001083953,NM_172069	chr2,chr2,chr2	-,-,+	THADA,THADA,PLEKHH2	347,275,41550
chr19:7797531-7799144	chr19	+	7797544	7799076	True	NM_198492,NM_001144904	chr19,chr19	-,+	CLEC4G,CLEC4M	-487,28958
chr5:134210875-134211343	chr5	+	134210953	134211134	True	NM_002653,NM_024715	chr5,chr5	-,+	PITX1,TXNDC15	158881,-1544
chr15:44081269-44082361	chr15	+	44081391	44081886	True	NM_001018108,NR_037673,NR_037672,NM_001199878,NM_001199876,NM_001199875,NR_031695	chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,-	SERF2,SERF2-C15ORF63,SERF2,SERF2,SERF2,SERF2,MIR1282	2153,2287,2287,2688,2287,2287,4134
chr16:88726975-88728706	chr16	+	88727526	88728682	True	NM_002461,NR_024399,NR_024402	chr16,chr16,chr16	-,+,+	MVD,MGC23284,MGC23284	863,1098,1098
chr1:114472889-114474387	chr1	+	114473031	114474403	True	NM_152696,NM_198268,NM_006594	chr1,chr1,chr1	+,+,-	HIPK1,HIPK1,AP4B1	-1086,-1086,-25290
chr20:13760368-13761048	chr20	+	13760596	13761078	True	NM_001039375,NR_029377,NM_024120,NM_016649	chr20,chr20,chr20,chr20	+,+,+,-	C20orf7,C20orf7,C20orf7,ESF1	4593,4593,4593,4512
chr15:78913882-78915655	chr15	+	78914069	78915302	True	NM_001166694,NM_000743,NM_000745	chr15,chr15,chr15	-,-,+	CHRNA3,CHRNA3,CHRNA5	-432,-432,-56261
chr7:158623105-158623687	chr7	+	158623116	158623730	True	NM_018051,NM_020728	chr7,chr7	+,-	WDR60,ESYT2	25538,-797
chr7:129987154-129987361	chr7	+	129987230	129987362	True	NM_001127442,NM_001127441,NM_080385,NM_018718	chr7,chr7,chr7,chr7	+,+,+,-	CPA5,CPA5,CPA5,TSGA14	-2651,-2651,-2651,93542
chr1:210503182-210503800	chr1	+	210503396	210503846	True	NM_001170588,NM_018194,NM_001170580,NM_001170564,NM_001170587,NR_024337,NM_001122834	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-,+	HHAT,HHAT,HHAT,HHAT,HHAT,C1orf133,HHAT	-1205,-1205,-815,-1859,-1205,-95930,-1859
chr1:23672857-23673266	chr1	+	23672927	23673042	True	NR_033690,NM_001102398,NM_001102399,NM_005826,NM_001102397	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	C1orf213,HNRNPR,HNRNPR,HNRNPR,HNRNPR	22421,-2074,-2074,-2074,-2074
chr19:32898513-32899170	chr19	+	32898543	32899181	True	NM_207325,NM_032139,NM_001172774	chr19,chr19,chr19	+,-,+	DPY19L3,ANKRD27,DPY19L3	-1572,266971,-1939
chr20:57268955-57269315	chr20	+	57269078	57269300	True	NR_029844,NM_024663,NM_001204873,NM_001204872	chr20,chr20,chr20,chr20	-,+,+,+	MIR296,NPEPL1,NPEPL1,NPEPL1	123499,-1267,-4942,-4942
chr19:9647093-9647610	chr19	+	9647248	9647464	True	NM_024106,NM_001172651	chr19,chr19	-,+	ZNF426,ZNF177	1889,-160316
chr11:126172946-126173343	chr11	+	126173071	126173392	True	NM_014026,NM_003139	chr11,chr11	+,-	DCPS,SRPR	254,-34194
chr2:142888104-142888307	chr2	+	142888109	142888337	True	NM_018557,NM_001032998	chr2,chr2	-,+	LRP1B,KYNU	983,746857
chr7:65956539-65957911	chr7	+	65957131	65957899	True	NM_001167961,NR_002933	chr7,chr7	+,-	KCTD7,LOC493754	135968,85649
chr7:65956539-65957911	chr7	-	66311398	66311448	False	NR_003934,NM_017994	chr7,chr7	-,+	LOC729156,C7orf42	-1585,74754
chr10:4721684-4722584	chr10	+	4721721	4722633	True	NR_024475,NR_015425	chr10,chr10	-,+	LOC100216001,LOC338588	-1459,-23424
chr16:67223270-67223545	chr16	+	67223510	67223594	True	NM_024712,NM_001950,NM_178516,NM_001040715	chr16,chr16,chr16,chr16	+,+,-,-	ELMO3,E2F4,EXOC3L1,KIAA0895L	9433,2473,563,-5627
chr10:61887748-61888090	chr10	+	61887892	61888054	True	NM_001149,NM_001170406	chr10,chr10	-,+	ANK3,CDK1	12770,650034
chr17:66513036-66515009	chr17	+	66513040	66514688	True	NR_027751,NM_212472,NM_212471,NM_002734	chr17,chr17,chr17,chr17	-,+,+,+	FAM20A,PRKAR1A,PRKAR1A,PRKAR1A	39930,-4557,-4990,-4557
chr10:73634491-73635432	chr10	+	73634516	73634816	True	NM_001171936,NM_002778	chr10,chr10	+,-	CDH23,PSAP	-62927,-23434
chr1:200708925-200710585	chr1	+	200708979	200710625	True	NM_203459,NM_001031725	chr1,chr1	+,-	CAMSAP1L1,DDX59	-345,-69853
chr13:77889952-77891243	chr13	+	77890079	77890992	True	NM_015057,NM_001160706	chr13,chr13	-,+	MYCBP2,SCEL	10235,218816
chr16:66596714-66597641	chr16	+	66597020	66597676	True	NM_181270,NM_181271,NM_181272,NM_181283,NM_181268,NM_181296,NM_004614,NM_181269,NM_052999	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,+,-,+,+	CMTM1,CMTM1,CMTM1,CMTM1,CMTM1,CMTM1,TK2,CMTM1,CMTM1	2617,2617,2617,2617,2673,2617,-12705,2617,2673
chr17:36831950-36832502	chr17	+	36832154	36832534	True	NM_005937,NM_001130677	chr17,chr17	+,-	MLLT6,C17orf96	29338,-967
chr11:64782137-64782570	chr11	+	64782167	64782247	True	NM_001199745,NR_037650,NM_001667,NM_138456	chr11,chr11,chr11,chr11	+,+,+,-	ARL2,ARL2-SNX15,ARL2,BATF2	-633,-633,-633,-17650
chr16:67968807-67969270	chr16	+	67968864	67969190	True	NM_006742,NM_001907,NM_002801,NM_000229	chr16,chr16,chr16,chr16	+,-,-,-	PSKH1,CTRL,PSMB10,LCAT	-41740,-3086,1640,8875
chr14:101350105-101350385	chr14	+	101350176	101350432	True	NR_029965,NR_029966,NR_029699,NR_029696,NR_030173,NR_030617,NR_029889,NM_001134888	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,+,+,+,+,-	MIR431,MIR433,MIR136,MIR127,MIR432,MIR665,MIR337,RTL1	-2883,-2004,606,-911,387,-8857,-9397,802
chr12:49294734-49295799	chr12	+	49295192	49295358	True	NM_001143781,NM_033124	chr12,chr12	-,+	FKBP11,CCDC65	23356,2534
chr3:150699975-150700786	chr3	+	150699977	150700751	True	NR_024066,NM_174878,NM_001195794	chr3,chr3,chr3	+,-,-	CLRN1OS,CLRN1,CLRN1	-9571,-9191,-9191
chr16:67535176-67535969	chr16	+	67535480	67535547	True	NM_001138,NM_024519	chr16,chr16	-,+	AGRP,FAM65A	-17764,27169
chr9:101464837-101466379	chr9	+	101464926	101466353	True	NM_024642,NM_005458	chr9,chr9	+,-	GALNT12,GABBR2	103627,5184
chr17:42993726-42994261	chr17	+	42993819	42994281	True	NM_001131019,NM_213607,NM_002055	chr17,chr17,chr17	-,+,-	GFAP,CCDC103,GFAP	-905,-16716,-905
chr2:69967972-69968600	chr2	+	69968159	69968602	True	NM_001153,NM_014911	chr2,chr2	+,-	ANXA4,AAK1	524,-97182
chr1:109203468-109203759	chr1	+	109203565	109203707	True	NM_001102592,NM_144584,NM_018061	chr1,chr1,chr1	-,-,+	HENMT1,HENMT1,PRPF38B	87,491,31224
chr22:18046591-18047457	chr22	+	18046929	18047374	True	NM_031481,NM_001039366	chr22,chr22	+,-	SLC25A18,ATP6V1E1	-3804,64271
chr20:21687045-21687258	chr20	+	21687050	21687272	True	NM_002509,NM_006192	chr20,chr20	-,+	NKX2-2,PAX1	-192386,-804
chr15:88116594-88117952	chr15	+	88116798	88117966	True	NM_001012338,NR_026869	chr15,chr15	-,+	NTRK3,NCRNA00052	681757,2193
chr6:15063533-15065049	chr6	+	15064030	15064841	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	181685,598507
chr19:35450227-35451747	chr19	+	35450413	35451491	True	NR_024018,NM_175872	chr19,chr19	+,-	ZNF30,ZNF792	-32657,3512
chr12:53850164-53850513	chr12	+	53850305	53850535	True	NM_001128911,NM_001128912,NM_001128913,NM_001128914,NM_031989,NM_005016,NM_001193511,NM_001098620	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,+,+,+,+,-,+	PCBP2,PCBP2,PCBP2,PCBP2,PCBP2,PCBP2,MAP3K12,PCBP2	-4479,-4479,-4479,-4479,-4479,-4479,42963,-4479
chr7:142747719-142748533	chr7	+	142747812	142748567	True	NR_002140,NM_001001667	chr7,chr7	-,+	OR6W1P,OR6V1	12365,870
chr13:110961356-110961592	chr13	+	110961411	110961619	True	NM_001845,NM_001846	chr13,chr13	-,+	COL4A1,COL4A2	-1915,-1831
chr16:69797737-69798302	chr16	+	69797810	69798080	True	NM_014062,NM_199423,NM_007014	chr16,chr16,chr16	-,+,+	NOB1,WWP2,WWP2	-8981,-1587,-1587
chr8:99294783-99295953	chr8	+	99294951	99295995	True	NM_024759,NM_020697	chr8,chr8	-,+	NIPAL2,KCNS2	10676,143254
chr3:169380442-169380657	chr3	+	169380442	169380566	True	NM_001205194,NM_004991,NM_001185118	chr3,chr3,chr3	-,-,+	MECOM,MECOM,MYNN	1047,1047,110286
chr19:44455729-44456116	chr19	+	44455791	44455997	True	NM_003425,NM_013359	chr19,chr19	-,+	ZNF45,ZNF221	-16380,-450
chr1:174843596-174843907	chr1	+	174843633	174843944	True	NM_001035230,NM_022100	chr1,chr1	+,-	RABGAP1L,MRPS14	739,148700
chr5:176038564-176039162	chr5	+	176038573	176039109	True	NM_001099408,NM_052899	chr5,chr5	+,-	EIF4E1B,GPRIN1	18573,-1442
chr1:110027796-110028878	chr1	+	110028103	110028924	True	NM_020703,NM_153340,NM_001134403,NM_001134402,NM_182580,NM_001134404,NM_001134400	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,+,+,+,+	AMIGO1,ATXN7L2,CYB561D1,CYB561D1,CYB561D1,CYB561D1,CYB561D1	23462,-1593,7776,7733,7776,7776,7776
chr15:81427697-81428330	chr15	+	81428314	81428381	True	NM_015154,NM_173528	chr15,chr15	-,+	MESDC2,C15orf26	-146109,-1724
chr1:87595685-87596383	chr1	+	87595749	87596415	True	NR_026989,NR_026988,NR_026987,NR_026986,NR_026985,NM_203341	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-	LOC339524,LOC339524,LOC339524,LOC339524,LOC339524,SEP15	-352,-352,1193,1193,1193,-215642
chr17:40830267-40830747	chr17	+	40830489	40830689	True	NM_016602,NM_024927,NM_003632	chr17,chr17,chr17	-,-,+	CCR10,PLEKHH3,CNTNAP1	3206,-1441,3942
chr10:43936872-43937982	chr10	+	43937359	43937854	True	NR_026693,NM_001098204	chr10,chr10	+,-	ZNF487P,HNRNPF	-4846,-32663
chr4:9783078-9783356	chr4	+	9783129	9783405	True	NR_031688,NM_000798	chr4,chr4	-,+	MIR548I2,DRD5	-225192,76
chr5:137912062-137912464	chr5	+	137912209	137912285	True	NM_001964,NM_004134	chr5,chr5	+,-	EGR1,HSPA9	-111079,-891
chr17:37855817-37856022	chr17	+	37855857	37856029	True	NM_033419,NM_004448	chr17,chr17	-,+	PGAP3,ERBB2	-11547,224
chr12:1740147-1740398	chr12	+	1740147	1740447	True	NM_032642,NR_037422	chr12,chr12	+,-	WNT5B,MIR3649	-1786,29149
chr22:50710766-50711020	chr22	+	50710959	50711061	True	NM_002751,NM_014678	chr22,chr22	-,+	MAPK11,PPP6R2	-2180,70698
chr16:20754419-20755405	chr16	+	20754580	20755196	True	NM_202000,NM_017736	chr16,chr16	+,-	ACSM3,THUMPD1	20115,-1381
chr15:41189415-41190255	chr15	+	41189882	41190141	True	NM_020857,NM_133639	chr15,chr15	+,-	VPS18,RHOV	-3318,-23395
chr17:18576414-18576718	chr17	+	18576461	18576528	True	NM_001145045,NM_001037330,NR_026718	chr17,chr17,chr17	-,+,-	ZNF286B,TRIM16L,FOXO3B	9097,48873,19
chr8:39190085-39191139	chr8	+	39190255	39191181	True	NR_001448,NR_001569	chr8,chr8	+,-	ADAM5P,ADAM3A	-18124,189339
chr6:36920947-36921497	chr6	+	36921344	36921472	True	NM_014341,NM_001199159,NM_153370	chr6,chr6,chr6	-,+,+	MTCH1,PI16,PI16	32527,-5357,736
chr3:140974364-140975012	chr3	+	140974462	140975048	True	NM_001178140,NM_152282	chr3,chr3	-,+	TFDP2,ACPL2	744231,-23831
chr8:41522871-41523132	chr8	+	41522882	41523124	True	NM_020478,NR_030161,NM_178819,NM_020480,NM_001142445	chr8,chr8,chr8,chr8,chr8	-,-,+,-,-	ANK1,MIR486,AGPAT6,ANK1,ANK1	-78,-4856,-87226,-78,-78
chr16:69221108-69221319	chr16	+	69221147	69221293	True	NM_006750,NR_033227	chr16,chr16	+,-	SNTB2,CHTF8	-148,-54654
chr1:100437544-100439292	chr1	+	100438283	100439260	True	NM_012243,NM_194292	chr1,chr1	+,-	SLC35A3,SASS6	-2806,159312
chr9:131465876-131466193	chr9	+	131466013	131466153	True	NM_013355,NM_032799	chr9,chr9	+,-	PKN3,ZDHHC12	-1262,20305
chr21:43375772-43376015	chr21	+	43375894	43375961	True	NM_015500,NR_027273	chr21,chr21	-,+	C2CD2,C21orf121	-1895,66151
chr5:133969249-133969734	chr5	+	133969413	133969539	True	NM_021982,NM_016103,NM_001033503	chr5,chr5,chr5	+,-,-	SEC24A,SAR1B,SAR1B	14939,-880,-880
chr1:40724684-40725477	chr1	+	40724922	40725369	True	NM_005857,NM_001852	chr1,chr1	+,-	ZMPSTE24,COL9A2	-1244,57620
chr5:133743692-133745229	chr5	+	133743883	133745195	True	NM_003337,NM_080656	chr5,chr5	+,-	UBE2B,CDKN2AIPNL	-37064,2453
chr1:97186895-97187246	chr1	+	97186942	97187140	True	NM_000110,NM_021190	chr1,chr1	-,+	DPYD,PTBP2	1199525,34
chr16:5148719-5150275	chr16	+	5148974	5150152	True	NM_019109,NM_201400,NM_201598	chr16,chr16,chr16	+,-,-	ALG1,FAM86A,FAM86A	-27215,-1185,-1185
chr5:150595813-150596135	chr5	+	150595848	150595945	True	NM_000405,NM_015621	chr5,chr5	+,-	GM2A,CCDC69	36667,7766
chr14:103757147-103757932	chr14	+	103757270	103757838	True	NR_033938,NM_001969	chr14,chr14	-,+	LOC100131366,EIF5	-101905,42654
chr9:36194317-36195819	chr9	+	36194536	36195651	True	NM_001190383,NM_001184761,NM_001184760,NM_007096,NM_001076677,NM_001184762,NM_001833	chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,+,+,+,+,+,+	GNE,CLTA,CLTA,CLTA,CLTA,CLTA,CLTA	62904,-3734,-3734,-3734,-3734,-3734,-3734
chr10:103816723-103817102	chr10	+	103816877	103816941	True	NM_024747,NM_024541	chr10,chr10	+,-	HPS6,C10orf76	8182,-945
chr20:43519473-43519903	chr20	+	43519483	43519768	True	NM_006809,NM_139323,NM_003404	chr20,chr20,chr20	-,+,+	TOMM34,YWHAB,YWHAB	69397,-5197,-5197
chr9:39803351-39803555	chr9	+	39803497	39803571	True	NR_003528,NM_001085452	chr9,chr9	-,+	LOC653501,FAM75A1	-338971,81403
chr9:39803351-39803555	chr9	-	43699117	43699181	False	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	-68387,-14283
chr9:39803351-39803555	chr9	+	40620607	40620681	False	NM_001083124,NM_033160	chr9,chr9	+,-	FAM75A3,ZNF658	79609,171481
chr8:21880416-21881099	chr8	+	21880824	21881138	True	NM_024815,NM_182795	chr8,chr8	-,+	NUDT18,NPM2	85844,1215
chr4:165865837-165866496	chr4	+	165865855	165866473	True	NM_153027,NM_001012414	chr4,chr4	+,-	C4orf39,TRIM61	11626,32395
chr2:98329461-98329776	chr2	+	98329602	98329808	True	NM_001079,NM_005735	chr2,chr2	+,-	ZAP70,ACTR1B	222,-49041
chr4:819078-819290	chr4	+	819116	819252	True	NM_032326,NM_006651	chr4,chr4	+,-	TMEM175,CPLX1	107009,743
chr5:149338528-149339225	chr5	+	149338535	149339241	True	NM_000112,NM_000440	chr5,chr5	+,-	SLC26A2,PDE6A	1058,-14179
chr1:167063956-167065417	chr1	+	167063960	167065239	True	NM_005814,NM_001080426	chr1,chr1	-,+	GPA33,DUSP27	-4092,76
chr9:123799882-123801636	chr9	+	123799973	123801377	True	NM_007018,NM_001735	chr9,chr9	+,-	CEP110,C5	49196,11233
chr5:131891672-131892513	chr5	+	131891909	131892324	True	NM_005732,NM_000879	chr5,chr5	+,-	RAD50,IL5	291,-12695
chr1:104088904-104090718	chr1	+	104089129	104090203	True	NM_020978,NM_001008218	chr1,chr1	+,-	AMY2B,AMY1B	7118,148736
chr12:133605217-133606069	chr12	+	133605403	133605586	True	NM_003428,NM_001164715,NM_001127372	chr12,chr12,chr12	+,-,+	ZNF84,ZNF605,ZNF84	8291,-72511,8393
chr3:45430229-45430466	chr3	+	45430276	45430428	True	NM_015444,NM_015340	chr3,chr3	-,+	TMEM158,LARS2	-162462,-252
chr11:104838028-104839742	chr11	+	104838378	104839378	True	NM_001225,NM_001077244	chr11,chr11	-,+	CASP4,GRIA4	-1,641421
chr21:45207843-45208260	chr21	+	45208110	45208182	True	NM_000100,NM_003683	chr21,chr21	-,+	CSTB,RRP1	-11851,1235
chr16:29913221-29913604	chr16	+	29913236	29913566	True	NM_012410,NM_181718,NM_001114100,NM_001114099,NM_201575	chr16,chr16,chr16,chr16,chr16	-,+,-,-,-	SEZ6L2,ASPHD1,SEZ6L2,SEZ6L2,SEZ6L2	-2656,-1140,-2656,-2656,-2656
chr17:45935529-45936271	chr17	+	45935761	45936120	True	NM_199262,NM_033413	chr17,chr17	-,+	SP6,LRRC46	-2521,-26820
chr17:75315665-75315992	chr17	+	75315799	75315955	True	NM_006640,NR_036200	chr17,chr17	+,-	SEPT9,MIR4316	-253,77231
chr10:88127529-88128459	chr10	+	88127789	88128322	True	NM_017551,NM_001030015	chr10,chr10	-,+	GRID1,OPN4	-1539,285991
chr11:119693281-119695264	chr11	+	119693353	119695069	True	NM_203286,NM_178507	chr11,chr11	-,+	PVRL1,OAF	-93918,386677
chr8:17781007-17781260	chr8	+	17781066	17781242	True	NM_006197,NM_201552	chr8,chr8	+,-	PCM1,FGL1	-751,-28019
chr6:14866721-14867205	chr6	+	14866898	14867247	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	379279,796093
chr4:140200764-140201076	chr4	+	140200812	140201051	True	NM_057175,NM_032623	chr4,chr4	+,-	NAA15,C4orf49	21624,491
chr9:2281231-2282640	chr9	+	2281626	2282607	True	NM_139045,NR_015375	chr9,chr9	+,-	SMARCA2,FLJ35024	-266341,339816
chr9:44019477-44020270	chr9	+	44019551	44020295	True	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	-388821,-334717
chr9:44019477-44020270	chr9	+	66366988	66367732	False	NR_024443,NR_024496	chr9,chr9	-,+	LOC100133920,LOC442421	663300,126536
chr19:49053380-49054545	chr19	+	49053485	49054442	True	NM_177973,NM_001080434	chr19,chr19	+,-	SULT2B1,LMTK3	986,-37039
chr2:109336784-109337359	chr2	+	109336962	109337127	True	NM_022336,NM_006267	chr2,chr2	-,+	EDAR,RANBP2	268760,-1077
chr2:109336784-109337359	chr2	-	113189665	113189773	False	NM_153712,NM_001164463,NM_005054	chr2,chr2,chr2	+,-,-	TTL,RGPD8,RGPD5	49969,1500,1385
chr2:109336784-109337359	chr2	+	87170634	87170757	False	NM_001032392,NM_001024457	chr2,chr2	-,+	PLGLB1,RGPD1	78271,-25958
chr18:3820241-3821086	chr18	+	3820270	3820804	True	NR_024101,NM_001003809	chr18,chr18	+,-	FLJ35776,DLGAP1	-226209,24554
chr17:19618371-19619110	chr17	+	19618462	19618857	True	NM_001099646,NM_000382,NM_152908	chr17,chr17,chr17	-,+,-	SLC47A2,ALDH3A2,SLC47A2	1237,-66449,1237
chr9:35550792-35552248	chr9	+	35551150	35551770	True	NM_001099951,NM_001135999	chr9,chr9	-,+	FAM166B,RUSC2	12176,-12583
chr8:77466730-77468666	chr8	+	77466828	77468354	True	NM_024721,NR_024360	chr8,chr8	+,-	ZFHX4,LOC100192378	125160,127220
chr17:15690190-15690828	chr17	+	15690239	15690863	True	NM_006470,NR_002211	chr17,chr17	-,+	TRIM16,MEIS3P1	-104046,-126
chr17:15690190-15690828	chr17	+	20492912	20493198	False	NM_001190790,NR_029393	chr17,chr17	+,-	CDRT15L2,KRT16P3	-9926,-85101
chr3:139007438-139008361	chr3	+	139007572	139008362	True	NR_027070,NM_020191	chr3,chr3	-,+	PISRT1,MRPS22	-55208,54498
chr18:44333458-44334780	chr18	+	44333852	44334726	True	NM_013305,NM_031303	chr18,chr18	-,+	ST8SIA5,KATNAL2	2363,192060
chr5:9546837-9547466	chr5	+	9546836	9547506	True	NM_003966,NR_003689	chr5,chr5	-,+	SEMA5A,SNORD123	-603,1432
chr3:138740416-138740770	chr3	+	138740507	138740580	True	NM_001040061,NM_001013650	chr3,chr3	+,-	C3orf72,PRR23B	-74484,-739
chr21:38639919-38640168	chr21	+	38639982	38640154	True	NM_006052,NR_026719	chr21,chr21	-,+	DSCR3,DSCR9	-149,-59078
chr16:32895589-32896064	chr16	+	32895592	32895996	True	NR_003083,NM_016212	chr16,chr16	-,+	SLC6A10P,TP53TG3	517,308983
chr16:32895589-32896064	chr16	-	33779371	33779731	False	NR_033866,NM_001205265	chr16,chr16	-,+	LOC390705,TP53TG3B	-480669,-517302
chrY:10037676-10037878	chrY	+	10037718	10037828	True	NR_003593,NR_003589	chrY,chrY	+,-	TTTY23B,TTTY1B	-289362,-425790
chr19:49840355-49840733	chr19	+	49840402	49840486	True	NM_001040031,NM_014037,NM_001774	chr19,chr19,chr19	+,-,+	CD37,SLC6A16,CD37	-1776,-11928,-1776
chr1:161134894-161135224	chr1	+	161134902	161135212	True	NM_000309,NM_001199873,NM_012475,NM_001014443,NM_001122764	chr1,chr1,chr1,chr1,chr1	+,-,+,+,+	PPOX,B4GALT3,USP21,USP21,PPOX	968,12596,-5699,-5699,968
chr16:84326783-84327409	chr16	+	84326911	84327273	True	NM_021197,NM_172347	chr16,chr16	+,-	WFDC1,KCNG4	1127,-53555
chr1:44436839-44437359	chr1	+	44436867	44437405	True	NM_001384,NM_001005417,NM_003780,NM_004047,NM_001039457,NM_006934,NM_001039589	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-,+	DPH2,B4GALT2,B4GALT2,ATP6V0B,ATP6V0B,SLC6A9,DPH2	-1265,8777,7460,3196,3196,45642,-1265
chr10:116444257-116444830	chr10	+	116444393	116444848	True	NM_001003408,NM_020940,NM_001003407	chr10,chr10,chr10	-,+,-	ABLIM1,FAM160B1,ABLIM1	-11,136654,-11
chr9:100459799-100461241	chr9	+	100459821	100460657	True	NM_000380,NR_027302,NM_002486	chr9,chr9,chr9	-,-,+	XPA,XPA,NCBP1	-130,-130,-64168
chr17:39780834-39781280	chr17	+	39780999	39781135	True	NM_005801,NM_000422	chr17,chr17	+,-	EIF1,KRT17	63991,-117
chr7:144528137-144528496	chr7	+	144528136	144528501	True	NM_005435,NM_022445,NM_001042482	chr7,chr7,chr7	+,-,-	ARHGEF5,TPK1,TPK1	-475699,4696,4696
chr19:5691512-5691768	chr19	+	5691576	5691816	True	NM_033643,NM_205767,NM_015414	chr19,chr19,chr19	+,-,+	RPL36,C19orf70,RPL36	-1355,-10665,-1281
chrX:131249131-131250701	chrX	+	131249218	131250580	True	NM_001042452,NM_194277	chrX,chrX	+,-	MST4,FRMD7	-91633,11532
chr12:54070414-54070975	chr12	+	54070430	54070925	True	NM_001002031,NM_005176,NM_134324	chr12,chr12,chr12	-,-,+	ATP5G2,ATP5G2,TARBP2	8,-321,-175104
chr13:25874704-25874993	chr13	+	25874708	25874972	True	NM_001008564,NM_004685,NM_014089	chr13,chr13,chr13	+,-,+	NUPL1,MTMR6,NUPL1	693,-13004,693
chr8:22551028-22551441	chr8	+	22551033	22551453	True	NM_021174,NM_001199880,NM_004430,NM_001199881	chr8,chr8,chr8,chr8	+,-,-,-	KIAA1967,EGR3,EGR3,EGR3	-88545,-1131,-218,-940
chr22:21739513-21739923	chr22	+	21739584	21739868	True	NM_001128635,NR_003700,NM_001128633	chr22,chr22,chr22	+,-,+	RIMBP3B,PI4KAP2,RIMBP3C	-1595,131962,-1972
chr22:21739513-21739923	chr22	-	20459580	20459864	False	NM_015672,NR_026919	chr22,chr22	-,+	RIMBP3,LOC150197	1972,-265776
chr22:21739513-21739923	chr22	-	21903544	21903828	False	NM_001128635,NM_003347,NM_001128633	chr22,chr22,chr22	-,+,-	RIMBP3B,UBE2L3,RIMBP3C	1595,18128,1972
chr1:187434765-187436657	chr1	+	187434862	187436669	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-785303,-636881
chr10:92680883-92681595	chr10	+	92680882	92681602	True	NM_001104546,NM_014391	chr10,chr10	+,-	RPP30,ANKRD1	-49224,-28
chrX:113290884-113291462	chrX	+	113290945	113291076	True	NM_000868,NM_000640	chrX,chrX	+,-	HTR2C,IL13RA2	527474,961182
chr2:177028765-177029603	chr2	+	177029011	177029545	True	NR_033979,NM_006898	chr2,chr2	-,+	LOC401022,HOXD3	24191,-263
chrX:101910903-101911400	chrX	+	101910937	101911391	True	NM_021992,NM_014710,NM_001099410,NM_001184727,NM_001099411	chrX,chrX,chrX,chrX,chrX	-,+,+,+,+	TMSB15A,GPRASP1,GPRASP1,GPRASP1,GPRASP1	-139238,-4694,-4694,-4659,-4694
chr16:18992620-18994021	chr16	+	18992848	18994081	True	NM_015092,NM_024847,NM_001160364	chr16,chr16,chr16	-,+,+	SMG1,TMC7,TMC7	-55122,1174,1527
chr9:95949364-95951038	chr9	+	95949501	95950747	True	NM_004148,NM_006648	chr9,chr9	-,+	NINJ1,WNK2	-52931,-2340
chr10:65192049-65193015	chr10	+	65192078	65192781	True	NR_027182,NM_032776	chr10,chr10	+,-	LOC84989,JMJD1C	32207,33002
chr8:98291417-98291627	chr8	+	98291434	98291679	True	NM_033512,NM_178812	chr8,chr8	-,+	TSPYL5,MTDH	-1258,364727
chr3:150321406-150321616	chr3	+	150321440	150321616	True	NM_016275,NM_014445	chr3,chr3	+,-	SELT,SERP1	-425,-57012
chr19:11487549-11489052	chr19	+	11487820	11488832	True	NM_000121,NM_175871,NR_033663	chr19,chr19,chr19	-,+,-	EPOR,C19orf39,EPOR	6236,-2496,6236
chr9:32523631-32524485	chr9	+	32523719	32524511	True	NM_014314,NR_033991	chr9,chr9	-,+	DDX58,LOC100129250	1867,26630
chr8:128805761-128806080	chr8	+	128805931	128806087	True	NR_003367,NR_024393,NR_031609	chr8,chr8,chr8	+,-,+	PVT1,LOC727677,MIR1204	691,-311547,2120
chr11:92893899-92894299	chr11	+	92893899	92893998	True	NM_152313,NM_181645	chr11,chr11	-,+	SLC36A4,CCDC67	37152,169884
chr12:15709496-15710912	chr12	+	15709496	15710813	True	NM_004447,NM_030671	chr12,chr12	-,+	EPS8,PTPRO	231747,-10261
chr1:22890971-22891373	chr1	+	22891051	22891395	True	NM_020526,NR_036214,NM_001006943	chr1,chr1,chr1	+,-,+	EPHA8,MIR4253,EPHA8	-1098,298374,-1098
chr15:64649787-64651014	chr15	+	64649896	64650792	True	NM_022048,NM_016213	chr15,chr15	-,+	CSNK1G1,TRIP4	-1454,29210
chr19:14780567-14781785	chr19	+	14780946	14781763	True	NM_032433,NM_032571	chr19,chr19	+,-	ZNF333,EMR3	19106,4020
chr3:52805850-52807566	chr3	+	52806244	52807275	True	NM_003157,NM_001193533,NM_001166435,NM_001166434,NM_001166436,NM_002215	chr3,chr3,chr3,chr3,chr3,chr3	-,-,+,+,+,+	NEK4,NEK4,ITIH1,ITIH1,ITIH1,ITIH1	-1279,-1279,6661,5247,6661,4332
chr12:49373529-49373758	chr12	+	49373659	49373779	True	NM_003394,NM_005430	chr12,chr12	-,+	WNT10B,WNT1	-8018,-1474
chr15:68522785-68524161	chr15	+	68522891	68523975	True	NM_017882,NM_015322	chr15,chr15	-,+	CLN6,FEM1B	-811,46165
chrX:119499327-119499715	chrX	+	119499505	119499700	True	NM_017938,NM_001142447,NM_012069	chrX,chrX,chrX	-,+,+	FAM70A,ATP1B4,ATP1B4	-54114,-3616,-3616
chr3:128209589-128209964	chr3	+	128209707	128209999	True	NM_001145662,NM_001145661,NR_026954,NM_032638	chr3,chr3,chr3,chr3	-,-,+,-	GATA2,GATA2,LOC90246,GATA2	-2943,-2334,16678,2081
chr17:42635602-42636122	chr17	+	42635669	42636015	True	NM_001466,NR_036474	chr17,chr17	+,-	FZD2,GPATCH8	-908,-54712
chr1:153508641-153508873	chr1	+	153508705	153508901	True	NM_002962,NM_002961,NM_019554,NM_014624,NM_006271	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	S100A5,S100A4,S100A4,S100A6,S100A1	5390,9431,9431,12,91971
chr2:232330541-232330814	chr2	+	232330771	232330855	True	NM_005381,NR_004398,NM_145236,NR_002908	chr2,chr2,chr2,chr2	-,-,+,-	NCL,SNORD82,B3GNT7,SNORD20	-1566,-5618,-70487,-9537
chr7:102792180-102793187	chr7	+	102792199	102792771	True	NR_026660,NM_198990,NM_001122838,NM_031905	chr7,chr7,chr7,chr7	-,-,-,+	RPL19P12,NAPEPLD,NAPEPLD,ARMC10	-9349,-2630,-2630,-76923
chr19:41860907-41862398	chr19	+	41861183	41862258	True	NM_030578,NM_001098825,NM_000660	chr19,chr19,chr19	-,+,-	B9D2,TMEM91,TGFB1	7871,7612,-1352
chr5:145473767-145475486	chr5	+	145473981	145475518	True	NM_018989,NM_001029869	chr5,chr5	+,-	RBM27,PLAC8L1	107644,8478
chr18:20717811-20719082	chr18	+	20717959	20718851	True	NM_001100619,NR_023359,NM_032933	chr18,chr18,chr18	+,+,-	CABLES1,CABLES1,C18orf45	-2283,-3482,299124
chr22:39188378-39189263	chr22	+	39188659	39189293	True	NM_005740,NM_004286	chr22,chr22	-,+	DNAL4,GTPBP1	918,-86903
chr20:32307239-32307878	chr20	+	32307261	32307803	True	NM_032819,NM_007238,NM_183397	chr20,chr20,chr20	+,-,-	ZNF341,PXMP4,PXMP4	12004,383,383
chr1:106619364-106620665	chr1	+	106619505	106620702	True	NM_018137,NM_001079874	chr1,chr1	+,-	PRMT6,VAV3	978564,1610474
chr9:138989564-138989943	chr9	+	138989685	138989903	True	NM_015597,NM_144653	chr9,chr9	+,-	GPSM1,NACC2	232028,-2554
chr19:46734373-46734869	chr19	+	46734415	46734908	True	NM_198541,NM_207393	chr19,chr19	+,-	IGFL1,IGFL3	-1472,-106484
chr1:12961057-12962445	chr1	+	12961108	12961710	True	NM_001012276,NM_001039361	chr1,chr1	+,-	PRAMEF8,PRAMEF10	14739,-3014
chr1:12961057-12962445	chr1	-	13405519	13406121	False	NM_001012276,NM_001098376	chr1,chr1	-,+	PRAMEF8,PRAMEF15	-14754,15054
chr1:12961057-12962445	chr1	-	13626316	13626918	False	NM_001012276,NM_001098376	chr1,chr1	-,+	PRAMEF8,PRAMEF15	-14766,15054
chr19:38397034-38397279	chr19	+	38397110	38397262	True	NM_031951,NM_015073	chr19,chr19	-,+	WDR87,SIPA1L3	105,605
chr4:176919600-176919838	chr4	+	176919670	176919862	True	NM_170710,NM_005277,NM_201592	chr4,chr4,chr4	+,-,-	WDR17,GPM6A,GPM6A	67122,3836,3836
chr13:111364189-111364431	chr13	+	111364200	111364471	True	NM_198218,NM_198219,NM_005537,NM_024537,NM_198217	chr13,chr13,chr13,chr13,chr13	+,+,+,-,+	ING1,ING1,ING1,CARS2,ING1	1138,1153,2887,-5720,611
chr2:60910789-60912433	chr2	+	60910934	60912456	True	NM_022893,NM_022894	chr2,chr2	-,+	BCL11A,PAPOLG	-130301,70908
chr15:60297393-60297738	chr15	+	60297465	60297665	True	NM_012182,NM_004330	chr15,chr15	+,-	FOXB1,BNIP2	-1095,-315823
chr2:17995263-17996414	chr2	+	17995262	17996343	True	NM_001105569,NM_024624	chr2,chr2	+,-	MSGN1,SMC6	1442,-60166
chr5:23510558-23511119	chr5	+	23510919	23510981	True	NM_020227,NM_004061	chr5,chr5	+,-	PRDM9,CDH12	-3246,-657188
chr19:37187818-37188806	chr19	+	37187891	37188469	True	NM_152603,NM_153257	chr19,chr19	+,-	ZNF567,ZNF461	-7653,-30152
chr9:29512-30096	chr2	-	114340724	114340774	False	NR_026821,NR_024077,NR_024005	chr2,chr2,chr2	+,+,-	FAM138B,WASH2P,DDX11L2	-5816,455,18429
chr9:29512-30096	chr1	+	29781	30344	True	NM_001005221,NR_028325	chr1,chr1	-,+	OR4F29,LOC100132062	591740,293547
chr9:29512-30096	chr9	+	29559	30122	False	NM_182905,NM_203447,NR_026822	chr9,chr9,chr9	-,+,-	WASH1,DOCK8,FAM138C	10,184742,5792
chr9:29512-30096	chr12	-	73343	73904	False	NR_028269,NR_026823	chr12,chr12	+,-	LOC100288778,FAM138D	14079,75558
chr9:29512-30096	chr15	-	102500820	102501383	False	NR_026819,NR_034090	chr15,chr15	+,-	FAM138E,DDX11L9	-5783,17963
chr5:108747504-108748303	chr5	+	108747546	108747977	True	NM_014819,NM_002372	chr5,chr5	-,+	PJA2,MAN2A1	-1871,277178
chr9:101020040-101020950	chr9	+	101020125	101020959	True	NM_018946,NM_018421	chr9,chr9	+,-	NANS,TBC1D2	-201223,-2122
chr11:70046729-70047563	chr11	+	70046880	70047341	True	NM_003824,NM_005247	chr11,chr11	+,-	FADD,FGF3	1927,-412688
chr2:28720879-28722368	chr2	+	28721008	28722331	True	NM_017910,NM_153021,NM_001170585	chr2,chr2,chr2	-,+,+	TRMT61B,PLB1,PLB1	370901,-2126,-2126
chr8:12174100-12175720	chr8	+	12174189	12175757	True	NM_001195257,NM_001037804,NR_026789	chr8,chr8,chr8	-,-,+	LOC100133267,DEFB130,FAM66A	118,118,43770
chr8:12174100-12175720	chr8	+	11927619	11929188	False	NM_001195257,NM_001037804,NM_001039615	chr8,chr8,chr8	-,-,+	LOC100133267,DEFB130,ZNF705D	118,118,17658
chr22:38904185-38906004	chr22	+	38904489	38905577	True	NM_006855,NM_001098504,NM_006386	chr22,chr22,chr22	+,-,-	KDELR3,DDX17,DDX17	-40457,-2144,-2144
chr15:90438129-90439211	chr15	+	90438263	90438875	True	NR_023361,NM_005829,NM_198526,NR_037582	chr15,chr15,chr15,chr15	-,-,+,-	AP3S2,AP3S2,ZNF710,AP3S2	-646,-646,105876,-646
chr6:116595580-116596817	chr6	+	116595821	116596692	True	NM_003309,NM_001080976	chr6,chr6	-,+	TSPYL1,DSE	4639,4590
chrX:153774343-153774807	chrX	+	153774385	153774747	True	NM_003639,NM_001099856,NM_001099857,NM_001042351,NM_000402,NM_001145255	chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,-,-,+	IKBKG,IKBKG,IKBKG,G6PD,G6PD,IKBKG	1314,-3978,814,1090,536,814
chr5:74160346-74161122	chr5	+	74160457	74161013	True	NM_015566,NM_014886	chr5,chr5	-,+	FAM169A,NSA2	1660,-97417
chr22:38348096-38348764	chr22	+	38348258	38348713	True	NM_032561,NM_021974	chr22,chr22	-,+	C22orf23,POLR2F	940,960
chr10:51750275-51752143	chr10	+	51750285	51751561	True	NM_001077665,NM_006327	chr10,chr10	+,-	AGAP6,TIMM23	-2263,-126949
chr20:54580077-54580424	chr20	+	54580236	54580466	True	NM_080617,NM_019888	chr20,chr20	-,+	CBLN4,MC3R	-224,243321
chr17:66452395-66452812	chr17	+	66452433	66452847	True	NM_017983,NM_212471	chr17,chr17	-,+	WIPI1,PRKAR1A	856,55262
chr5:149739667-149740430	chr5	+	149739684	149740247	True	NM_001135244,NM_001135243,NM_001195141,NM_001135245,NM_000356,NM_001008657,NM_001025159	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,-	TCOF1,TCOF1,TCOF1,TCOF1,TCOF1,TCOF1,CD74	-2533,-2533,-2533,-2533,-2533,-2533,52126
chr6:144215116-144216593	chr6	+	144215397	144216039	True	NM_001013623,NM_001080952	chr6,chr6	+,-	C6orf94,PLAGL1	-29884,113560
chrX:117479908-117480140	chrX	+	117479907	117480093	True	NM_019045,NM_001168301,NM_001184966,NM_001184965	chrX,chrX,chrX,chrX	+,-,+,+	WDR44,KLHL13,WDR44,WDR44	40,-228604,40,40
chr15:37393683-37393885	chr15	+	37393702	37393905	True	NM_170674,NM_170675,NM_170676,NM_170677,NM_172315,NM_172316,NM_002399,NM_032499	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,-,-,-,-,-,+	MEIS2,MEIS2,MEIS2,MEIS2,MEIS2,MEIS2,MEIS2,C15orf41	-998,-998,-998,-998,-3199,-2105,-202,-460947
chr11:69185872-69186838	chr11	+	69186053	69186705	True	NM_153451,NM_138768	chr11,chr11	-,+	ORAOV1,MYEOV	303510,-124482
chr22:50524311-50525482	chr22	+	50524384	50525358	True	NM_139202,NM_018995,NM_015166,NM_001164105,NM_001164104	chr22,chr22,chr22,chr22,chr22	-,+,-,+,+	MLC1,MOV10L1,MLC1,MOV10L1,MOV10L1	-603,3076,-26,3326,3076
chr10:133101778-133103709	chr10	+	133101890	133103562	True	NM_018461,NM_174937	chr10,chr10	+,-	PPP2R2D,TCERG1L	644397,6472
chr19:56153492-56153709	chr19	+	56153495	56153755	True	NM_016535,NM_016202,NM_013301,NM_001163423,NM_203374,NM_207115	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,-,+	ZNF581,ZNF580,CCDC106,ZNF580,ZNF784,ZNF580	1230,-130,5198,-85,-17554,-1156
chr8:67973884-67974217	chr8	+	67973929	67974265	True	NM_024790,NM_006837	chr8,chr8	+,-	CSPP1,COPS5	2337,347
chr7:46040011-46040406	chr7	+	46040028	46040444	True	NM_000596,NM_001013398	chr7,chr7	+,-	IGFBP1,IGFBP3	-112131,-79157
chr1:200838955-200839216	chr1	+	200838987	200839256	True	NM_005298,NM_017596	chr1,chr1	+,-	GPR25,KIF21B	2909,153622
chr12:46653002-46653897	chr12	+	46653050	46653877	True	NM_001077484,NM_030674,NM_152641	chr12,chr12,chr12	-,-,+	SLC38A1,SLC38A1,ARID2	9389,9389,-529494
chr5:150714976-150716804	chr5	+	150715045	150716717	True	NM_001167607,NM_181776	chr5,chr5	+,-	GM2A,SLC36A2	-82485,10485
chr7:128782244-128784127	chr7	+	128782256	128784117	True	NM_178562,NR_034053	chr7,chr7	+,-	TSPAN33,TNPO3	594,-87029
chr6:170849496-170849977	chr6	+	170849565	170850010	True	NM_001172085,NM_002793	chr6,chr6	+,-	TBP,PSMB1	13410,12457
chr16:221516-222170	chr16	+	221813	222037	True	NM_001077350,NM_000558,NM_000517,NM_001003938,NM_005331	chr16,chr16,chr16,chr16,chr16	-,+,+,+,+	NPRL3,HBA1,HBA2,HBM,HBQ1	-33141,4641,808,-5891,8295
chr1:43996889-43997159	chr1	+	43997075	43997137	True	NM_002840,NM_031207,NM_130440	chr1,chr1,chr1	+,-,+	PTPRF,HYI,PTPRF	-579,-77415,-579
chr7:140398557-140399485	chr7	+	140398596	140399524	True	NM_004546,NR_024454	chr7,chr7	+,-	NDUFB2,LOC100134713	-2173,-1719
chr12:154275-155301	chr12	+	154416	155206	True	NM_001170738,NR_026823	chr12,chr12	+,-	IQSEC3,FAM138D	20842,-5004
chr12:154275-155301	chr12	-	60227	60277	False	NR_028269,NR_026823	chr12,chr12	+,-	LOC100288778,FAM138D	27706,89185
chr2:47628978-47629379	chr2	+	47629041	47629282	True	NM_022055,NM_000251	chr2,chr2	-,+	KCNK12,MSH2	168238,980
chr12:2942693-2943309	chr12	+	2942724	2943188	True	NM_018463,NM_031474	chr12,chr12	+,-	ITFG2,NRIP2	-20988,1083
chr4:2628157-2629046	chr4	+	2628170	2628830	True	NM_003704,NM_001161527	chr4,chr4	+,-	FAM193A,TNIP2	-1062,128972
chr14:91974221-91975549	chr14	+	91974331	91975516	True	NM_032560,NR_003709	chr14,chr14	-,+	SMEK1,SNORA11B	1180,-381622
chr19:47988484-47989332	chr19	+	47988484	47989298	True	NM_015711,NM_007059	chr19,chr19	+,-	GLTSCR1,KPTN	122154,-963
chr1:46111889-46112318	chr1	+	46111889	46112174	True	NM_016486,NR_026768	chr1,chr1	+,-	TMEM69,RPS15AP10	41672,242
chrX:23353539-23353808	chrX	+	23353602	23353753	True	NM_173495,NM_001033583	chrX,chrX	+,-	PTCHD1,ACOT9	-668,407711
chr12:6876908-6877181	chr12	+	6876919	6877173	True	NM_002286,NR_026581,NM_002824	chr12,chr12,chr12	+,-,+	LAG3,MLF2,PTMS	4496,-14283,-1429
chr8:10588740-10588949	chr8	+	10588754	10588968	True	NM_001040032,NM_031439	chr8,chr8	+,-	C8orf74,SOX7	-58658,-732
chr13:20133678-20133950	chr13	+	20133680	20133980	True	NM_199254,NM_017520	chr13,chr13	-,+	TPTE2,MPHOSPH8	-22777,73807
chr13:20133678-20133950	chr13	-	21835894	21835944	False	NM_145061,NM_024026	chr13,chr13	-,+	SKA3,MRP63	-85153,-85573
chr8:6737561-6737986	chr8	+	6737816	6738034	True	NM_005218,NM_018361	chr8,chr8	-,+	DEFB1,AGPAT5	-2287,-171989
chrX:19143407-19144169	chrX	+	19143448	19143872	True	NM_001079858,NM_001079859,NM_001079860,NM_001184835,NM_001184834,NM_001184837,NM_001184836,NM_001184833,NM_000284,NM_005756	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,-,-,-,+,-	GPR64,GPR64,GPR64,GPR64,GPR64,GPR64,GPR64,GPR64,PDHA1,GPR64	-2693,-2693,-2693,-2693,-2693,-2693,-2693,-2693,218138,-2693
chr17:47652076-47652513	chr17	+	47652192	47652472	True	NM_001007226,NM_007225	chr17,chr17	-,+	SPOP,NXPH3	103103,825
chr2:171916478-171917659	chr2	+	171916506	171917689	True	NM_015530,NM_001136555	chr2,chr2	+,-	GORASP2,TLK1	-131521,5851
chr19:10195896-10196335	chr19	+	10195909	10196377	True	NM_018381,NM_031917	chr19,chr19	+,-	C19orf66,ANGPTL6	428,17098
chr13:114585995-114586707	chr13	+	114586098	114586602	True	NM_000820,NR_024609	chr13,chr13	-,+	GAS6,FLJ44054	-19052,7
chr11:19076982-19077731	chr11	+	19077070	19077715	True	NM_001001483,NM_054030	chr11,chr11	+,-	ZDHHC13,MRGPRX2	60976,4566
chr7:116505329-116506384	chr7	+	116505525	116506243	True	NR_002330,NM_006136	chr7,chr7	-,+	ST7OT1,CAPZA2	88202,-3022
chr22:40570751-40571082	chr22	+	40570915	40571071	True	NM_152512,NM_001162501,NM_015088	chr22,chr22,chr22	-,+,+	ENTHD1,TNRC6B,TNRC6B	-281121,2857,2857
chr2:165474777-165476300	chr2	+	165474901	165476322	True	NM_001040142,NM_004490	chr2,chr2	+,-	SCN2A,GRB14	619589,2094
chr3:46393475-46393730	chr3	+	46393553	46393643	True	NM_001123396,NM_001123041,NM_001199149	chr3,chr3,chr3	+,+,-	CCR2,CCR2,LTF	1591,1591,111568
chr1:153230203-153230905	chr1	+	153230399	153230941	True	NM_052891,NM_000427	chr1,chr1	-,+	PGLYRP3,LOR	52303,1237
chr16:2571254-2571600	chr16	+	2571280	2571631	True	NM_001048212,NM_001198569,NM_015944,NM_001145815,NM_001694	chr16,chr16,chr16,chr16,chr16	-,+,+,+,+	CEMP1,ATP6V0C,AMDHD2,AMDHD2,ATP6V0C	9829,-7604,-968,-968,-7460
chr5:118600076-118600448	chr5	+	118600117	118600497	True	NM_173666,NM_001077654	chr5,chr5	-,+	DTWD2,TNFAIP8	-275877,3920
chr3:149762849-149764448	chr3	+	149763231	149764426	True	NM_053024,NR_036538	chr3,chr3	-,+	PFN2,LOC646903	-74490,-74224
chr6:139312596-139313802	chr6	+	139312597	139313751	True	NM_001128617,NM_031922,NM_021243	chr6,chr6,chr6	-,-,+	REPS1,REPS1,C6orf115	-3199,-3199,36067
chr1:26856755-26857153	chr1	+	26856887	26857039	True	NM_002953,NM_173574	chr1,chr1	+,-	RPS6KA1,ZNF683	-689,-157621
chr1:167920532-167921546	chr1	+	167920858	167921414	True	NM_018442,NM_015415	chr1,chr1	+,-	DCAF6,BRP44	-15117,-14551
chr16:21609592-21610033	chr16	+	21609752	21610017	True	NM_001077180,NM_016025,NM_005849	chr16,chr16,chr16	+,+,-	METTL9,METTL9,IGSF6	838,838,54012
chr10:120937672-120938027	chr10	+	120937735	120937971	True	NM_005308,NM_014098,NM_006793	chr10,chr10,chr10	+,-,-	GRK5,PRDX3,PRDX3	29225,424,424
chr20:17542892-17544115	chr20	+	17543207	17543876	True	NM_001011546,NM_001161705,NM_006870	chr20,chr20,chr20	+,-,+	DSTN,BFSP1,DSTN	6722,-3602,6722
chr11:6220603-6221157	chr11	+	6220765	6221133	True	NM_001005178,NM_173525,NM_001004052	chr11,chr11,chr11	+,+,-	OR52W1,C11orf42,OR52B2	-362,5664,-29209
chr14:100535724-100536283	chr14	+	100535729	100536214	True	NM_016337,NM_206918	chr14,chr14	+,-	EVL,DEGS2	-4029,89861
chr3:100054710-100056590	chr3	+	100054791	100056291	True	NM_020202,NM_014820	chr3,chr3	+,-	NIT2,TOMM70A	-1288,63990
chr6:31080054-31081615	chr6	+	31081422	31081534	True	NM_014068,NM_001264,NM_014070	chr6,chr6,chr6	+,-,-	PSORS1C1,CDSN,C6orf15	1073,6768,-1090
chr6:31080054-31081615	chr6_mann_hap4	+	2429768	2429891	False	NM_014068,NM_001264,NM_014070	chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4	+,-,-	PSORS1C1,CDSN,C6orf15	1073,6775,-1090
chr6:31080054-31081615	chr6_dbb_hap3	+	2378594	2378646	False	NM_014068,NM_001264,NM_014070	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	+,-,-	PSORS1C1,CDSN,C6orf15	1133,6826,-1090
chr6:31080054-31081615	chr6_qbl_hap6	+	2377284	2377352	False	NM_014068,NM_001264,NM_014070	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	+,-,-	PSORS1C1,CDSN,C6orf15	1073,6771,-1134
chr6:31080054-31081615	chr6_mcf_hap5	+	2463347	2463459	False	NM_014068,NM_001264,NM_014070	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	+,-,-	PSORS1C1,CDSN,C6orf15	1073,6764,-1090
chr13:110959813-110960059	chr13	+	110959899	110960033	True	NM_001845,NM_001846	chr13,chr13	-,+	COL4A1,COL4A2	-403,-319
chr7:155755055-155755766	chr7	+	155755101	155755701	True	NM_000193,NM_053043	chr7,chr7	-,+	SHH,RBM33	-150134,-317956
chr16:3018053-3018620	chr16	+	3018141	3018465	True	NM_172229,NM_152341,NM_004203,NM_024507	chr16,chr16,chr16,chr16	+,+,-,+	KREMEN2,PAQR4,PKMYT1,KREMEN2	-3975,876,12125,-3975
chr10:70232343-70232883	chr10	+	70232545	70232851	True	NM_030625,NM_001080449	chr10,chr10	+,-	TET1,DNA2	87265,-815
chr6:32077007-32077310	chr6_mcf_hap5	+	3456835	3456963	False	NM_138717,NM_019105	chr6_mcf_hap5,chr6_mcf_hap5	+,-	PPT2,TNXB	44088,66
chr6:32077007-32077310	chr6_dbb_hap3	+	3356181	3356309	False	NM_138717,NM_019105	chr6_dbb_hap3,chr6_dbb_hap3	+,-	PPT2,TNXB	44092,66
chr6:32077007-32077310	chr6	+	32077007	32077135	True	NM_138717,NM_019105	chr6,chr6	+,-	PPT2,TNXB	44093,66
chr6:32077007-32077310	chr6_cox_hap2	+	3547669	3547797	False	NM_138717,NM_019105	chr6_cox_hap2,chr6_cox_hap2	+,-	PPT2,TNXB	44099,66
chr19:58787269-58789083	chr19	+	58787704	58788834	True	NM_021089,NM_130786	chr19,chr19	+,-	ZNF8,A1BG	1483,76081
chr1:14740008-14741778	chr1	+	14740471	14741817	True	NM_015209,NR_027136	chr1,chr1	+,-	KAZN,C1orf126	183395,737200
chr7:149470441-149470707	chr7	+	149470486	149470568	True	NM_207336,NM_198455	chr7,chr7	-,+	ZNF467,SSPO	-191,2562
chr19:9361845-9362135	chr19	+	9362015	9362143	True	NM_001005191,NM_001079935	chr19,chr19	-,+	OR7D4,OR7E24	-36468,-346
chr19:46387464-46387806	chr19	+	46387479	46387783	True	NM_004497,NM_015649	chr19,chr19	+,-	FOXA3,IRF2BP1	-20012,1643
chr3:15106001-15106314	chr3	+	15106104	15106170	True	NM_022497,NM_003298	chr3,chr3	-,+	MRPS25,NR2C2	696,-116920
chr13:108867270-108867677	chr13	+	108867445	108867726	True	NM_032859,NM_001098268,NM_206937,NM_002312	chr13,chr13,chr13,chr13	+,-,-,-	ABHD13,LIG4,LIG4,LIG4	3036,3040,206,-315
chr1:228646395-228646914	chr1	+	228646437	228646944	True	NM_033445,NM_175055	chr1,chr1	-,+	HIST3H2A,HIST3H2BB	-877,-680
chr9:138439938-138441226	chr9	+	138439949	138441197	True	NM_014582,NM_144654	chr9,chr9	+,-	OBP2A,C9orf116	-2015,-48188
chr6:143769374-143769926	chr6	+	143769646	143769881	True	NM_182503,NM_003630	chr6,chr6	-,+	ADAT2,PEX3	2017,2036
chr6:165569804-165570532	chr6	+	165569815	165570284	True	NM_144980,NR_027284	chr6,chr6	-,+	C6orf118,LOC441177	152887,830754
chr19:44122172-44123434	chr19	+	44122958	44123474	True	NM_001145641,NM_182498	chr19,chr19	+,-	SRRM5,ZNF428	-6758,590
chr12:94074070-94074751	chr12	+	94074183	94074667	True	NM_003348,NM_003805	chr12,chr12	-,+	UBE2N,CRADD	-238157,-3090
chr1:178514229-178515609	chr1	+	178514338	178515255	True	NR_033186,NM_004673	chr1,chr1	+,-	C1orf220,ANGPTL1	-2458,325011
chr19:12945700-12946032	chr19	+	12945797	12946063	True	NM_001080997,NM_014975,NM_031429	chr19,chr19,chr19	-,+,-	RTBDN,MAST1,RTBDN	-4590,3195,217
chr20:60811429-60811903	chr20	+	60811467	60811941	True	NM_007232,NM_014835,NM_144498	chr20,chr20,chr20	-,+,+	HRH3,OSBPL2,OSBPL2	-16144,1638,1638
chr13:100744333-100746004	chr13	+	100744543	100745809	True	NM_001127692,NM_001178004,NM_000282,NM_033132	chr13,chr13,chr13,chr13	+,+,+,-	PCCA,PCCA,PCCA,ZIC5	-3333,-3333,-3333,-120365
chr17:37856116-37856330	chr17	+	37856155	37856319	True	NM_033419,NM_004448	chr17,chr17	-,+	PGAP3,ERBB2	-11845,42
chr4:86849559-86851220	chr4	+	86849908	86851131	True	NM_031305,NM_138981	chr4,chr4	+,-	ARHGAP24,MAPK10	294,177725
chr19:8117669-8117964	chr19	+	8117677	8117803	True	NM_005624,NM_001419,NM_001201359	chr19,chr19,chr19	+,-,+	CCL25,ELAVL1,CCL25	-82,-47148,-82
chr8:100902244-100903646	chr8	+	100902522	100903119	True	NM_004374,NM_005034	chr8,chr8	-,+	COX6C,POLR2K	3174,259719
chr19:10428836-10429062	chr19	+	10428877	10429111	True	NM_001031734,NM_001103167,NM_003259	chr19,chr19,chr19	-,-,+	FDX1L,ZGLP1,ICAM5	-2186,-8644,-28273
chr6:52930652-52930854	chr6	+	52930687	52930751	True	NM_012347,NM_014920,NM_033481,NM_033480,NM_016513	chr6,chr6,chr6,chr6,chr6	+,-,+,+,-	FBXO9,ICK,FBXO9,FBXO9,ICK	5019,-4087,-942,-481,-4087
chr7:144704892-144706252	chr7	+	144704986	144706185	True	NM_005435,NM_022445	chr7,chr7	+,-	ARHGEF5,TPK1	-652561,-171840
chr4:107211630-107213359	chr4	+	107212007	107213377	True	NM_001142415,NM_001163435	chr4,chr4	+,-	AIMP1,TBCK	23389,24096
chr1:1111573-1111867	chr1	+	1111784	1111896	True	NR_029834,NM_153254,NR_029957,NM_004195,NM_001130045,NR_029639	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,-,+,+	MIR200A,TTLL10,MIR429,TNFRSF18,TTLL10,MIR200B	-8592,3180,-7450,30243,-2549,-9351
chr1:159505098-159506619	chr1	+	159505261	159506596	True	NM_001004469,NM_001639	chr1,chr1	-,+	OR10J5,APCS	-198,51019
chr17:31203720-31203929	chr17	+	31203806	31203876	True	NM_001033504,NM_015194	chr17,chr17	+,-	TMEM98,MYO1D	51051,76
chr1:57285620-57286120	chr1	+	57285932	57286104	True	NM_000562,NM_001004303	chr1,chr1	+,-	C8A,C1orf168	34338,-563
chr21:36040006-36040727	chr21	+	36040079	36040739	True	NM_004414,NM_053277	chr21,chr21	-,+	RCAN1,CLIC6	-52697,948
chr1:3569945-3571267	chr1	+	3569968	3571116	True	NM_001204188,NM_001204184,NM_005427,NM_001204186,NM_001204187,NM_001204185,NM_017818	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,+,-	TP73,TP73,TP73,TP73,TP73,TP73,WDR8	-890,-890,-890,-890,-890,-890,-3297
chr6:101841742-101842077	chr6	+	101841872	101841986	True	NM_022091,NM_001166247,NM_021956,NM_175768	chr6,chr6,chr6,chr6	-,+,+,+	ASCC3,GRIK2,GRIK2,GRIK2	-512648,4874,4874,4874
chr20:31804507-31805481	chr20	+	31804515	31805101	True	NM_001042439,NM_178466,NM_016082	chr20,chr20,chr20	+,+,-	C20orf71,C20orf71,CDK5RAP1	33,33,184286
chr19:10983256-10984236	chr19	+	10983303	10983971	True	NM_199141,NM_006858	chr19,chr19	+,-	CARM1,TMED1	-1104,-36320
chr12:49448523-49449061	chr12	+	49448634	49449087	True	NM_003482,NM_005430	chr12,chr12	-,+	MLL2,WNT1	71,-76449
chr5:161124992-161125971	chr5	+	161125199	161125999	True	NM_000811,NM_021911	chr5,chr5	+,-	GABRA6,GABRB2	-12600,-150069
chr10:32215244-32216357	chr10	+	32215278	32216386	True	NM_001026383,NM_018287	chr10,chr10	+,-	CCDC7,ARHGAP12	518654,1434
chr11:76089946-76090338	chr11	+	76089946	76090358	True	NM_020193,NM_004705	chr11,chr11	+,-	C11orf30,PRKRIR	65710,1572
chr6:124164192-124165053	chr6	+	124164282	124165092	True	NM_153355,NM_006073	chr6,chr6	+,-	NKAIN2,TRDN	-39267,-206340
chr17:46971324-46972579	chr17	+	46971395	46972508	True	NM_005175,NM_001002027,NM_007241	chr17,chr17,chr17	+,+,-	ATP5G1,ATP5G1,SNF8	-1305,-1305,49696
chr4:48770674-48772545	chr4	+	48771164	48772274	True	NM_001079840,NM_015030	chr4,chr4	+,-	OCIAD1,FRYL	60785,10092
chr20:34196463-34197788	chr20	+	34197131	34197576	True	NR_024377,NM_003116	chr20,chr20	-,+	FER1L4,SPAG4	-1647,6232
chr4:2041489-2041992	chr4	+	2041707	2041837	True	NM_001168243,NM_001141936,NM_005663	chr4,chr4,chr4	+,+,-	C4orf48,C4orf48,WHSC2	1882,1939,-30748
chr1:20497909-20498345	chr1	+	20497951	20498253	True	NM_001105572,NM_152376	chr1,chr1	-,+	PLA2G2C,UBXN10	3484,14324
chr13:79237244-79237943	chr13	+	79237284	79237946	True	NM_024546,NM_001161407	chr13,chr13	-,+	RNF219,NDFIP2	-3970,817312
chr9:82197322-82198383	chr9	+	82197329	82198405	True	NM_002072,NM_007005	chr9,chr9	-,+	GNAQ,TLE4	-1551110,-10502
chr10:47748595-47749365	chr10	+	47748633	47749409	True	NR_024495,NM_001630	chr10,chr10	-,+	LOC642826,ANXA8L2	-505139,-1765
chr10:47748595-47749365	chr10	-	47172254	47172396	False	NM_001137549,NM_001137548,NM_005972,NM_001137556,NM_001098845,NM_001040084	chr10,chr10,chr10,chr10,chr10,chr10	-,-,+,-,-,-	FAM25G,FAM25C,PPYR1,FAM25B,ANXA8L1,ANXA8	9343,9343,-88771,9343,1695,1777
chr10:47748595-47749365	chr10	-	49198164	49198215	False	NM_001137549,NM_001137548,NM_002750,NM_001137556	chr10,chr10,chr10,chr10	-,-,+,-	FAM25G,FAM25C,MAPK8,FAM25B	9661,9661,411471,9661
chr10:47748595-47749365	chr10	+	48256950	48257092	False	NM_001137549,NM_001137548,NM_001137556,NM_001098845,NM_001040084,NM_002900	chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,-	FAM25G,FAM25C,FAM25B,ANXA8L1,ANXA8,RBP3	-9340,-9340,-9340,-1695,-1777,133949
chr9:130888405-130888993	chr9	+	130888466	130888812	True	NR_027812,NR_033374,NR_024425,NR_027811,NM_025072	chr9,chr9,chr9,chr9,chr9	-,-,+,-,-	PTGES2,LOC100289019,LOC389791,PTGES2,PTGES2	1951,-7453,1995,1951,1713
chr19:40034470-40036294	chr19	+	40034681	40035893	True	NM_153232,NM_182704	chr19,chr19	-,+	EID2,SELV	-3843,-28979
chr5:148746610-148746937	chr5	+	148746657	148746935	True	NM_024028,NM_014443	chr5,chr5	+,-	PCYOX1L,IL17B	-9139,11953
chr16:18584350-18585410	chr16	+	18584517	18585113	True	NR_003569,NM_173614	chr16,chr16	+,-	ABCC6P1,NOMO2	-2004,-11083
chr16:18584350-18585410	chr16	-	16314774	16315316	False	NM_001171,NM_001079528,NM_001004067	chr16,chr16,chr16	-,-,+	ABCC6,ABCC6,NOMO3	2063,2063,11072
chr16:18584350-18585410	chr16	-	14916011	14916553	False	NR_023387,NM_014287	chr16,chr16	-,+	ABCC6P2,NOMO1	2057,11089
chr18:2944641-2946510	chr18	+	2945293	2946485	True	NM_032048,NR_026659	chr18,chr18	+,-	EMILIN2,LOC727896	-98323,186
chr11:123771757-123773562	chr11	+	123771874	123773442	True	NM_001005197,NM_001013743	chr11,chr11	+,-	OR8D4,TMEM225	3696,-15534
chr1:150573326-150573612	chr1	+	150573421	150573483	True	NM_182763,NR_036211	chr1,chr1	-,+	MCL1,MIR4257	-21207,-49072
chrX:55246354-55246882	chrX	+	55246404	55246881	True	NM_001013435,NM_001190708,NM_130467	chrX,chrX,chrX	+,-,+	PAGE5,MTRNR2L10,PAGE5	-74,-37460,-75
chr20:36531309-36531542	chr20	+	36531369	36531549	True	NM_080607,NM_014657	chr20,chr20	+,-	VSTM2L,TTI1	-51,130334
chr6:7518263-7518477	chr6	+	7518436	7518498	True	NM_001008844,NM_001170693	chr6,chr6	+,-	DSP,CAGE1	23371,-128494
chr8:82435478-82437470	chr8	+	82435586	82437352	True	NM_152284,NM_001105281	chr8,chr8	+,-	CHMP4C,FABP12	207335,6260
chr11:8932031-8932496	chr11	+	8932332	8932402	True	NM_020642,NM_005418,NM_182901	chr11,chr11,chr11	+,-,+	C11orf17,ST5,C11orf17	298,146,399
chr1:110230427-110230997	chr1	+	110230429	110230917	True	NM_000561,NM_000849,NM_146421	chr1,chr1,chr1	+,-,+	GSTM1,GSTM3,GSTM1	-62,52793,-62
chr11:33882528-33883538	chr11	+	33882619	33883581	True	NM_001142316,NM_203364,NM_001142315	chr11,chr11,chr11	-,+,-	LMO2,CAPRIN1,LMO2	7840,189648,7978
chr8:134306040-134306457	chr8	+	134306077	134306479	True	NM_001135242,NR_037944,NM_006096	chr8,chr8,chr8	-,+,-	NDRG1,WISP1,NDRG1	3118,-102859,3118
chr6:14695937-14696647	chr6	+	14695995	14696659	True	NM_001031713,NM_004973	chr6,chr6	-,+	CCDC90A,JARID2	-881206,549867
chr18:44237699-44237899	chr18	+	44237760	44237876	True	NM_144612,NM_031303	chr18,chr18	-,+	LOXHD1,KATNAL2	-764,288910
chr12:54672683-54673791	chr12	+	54672844	54673820	True	NM_002136,NM_012117,NM_031157,NR_002944	chr12,chr12,chr12,chr12	+,-,+,+	HNRNPA1,CBX5,HNRNPA1,HNRNPA1P10	667,145,667,712
chr16:90039484-90039808	chr16	+	90039578	90039770	True	NR_003227,NR_003226,NR_003228,NM_145039	chr16,chr16,chr16,chr16	+,+,+,-	AFG3L1P,AFG3L1P,AFG3L1P,CENPBD1	-641,-641,-641,-338
chr5:112767942-112769010	chr5	+	112768051	112768766	True	NM_032028,NM_022828	chr5,chr5	-,+	TSSK1B,YTHDC2	2013,80624
chr14:92332371-92334240	chr14	+	92332373	92333889	True	NM_001128596,NM_017437	chr14,chr14	-,+	TC2N,CPSF2	41,254408
chr4:190204808-190206070	chr4	+	190204816	190206097	True	NR_036692,NM_020040	chr4,chr4	+,-	HSP90AA4P,TUBB4Q	188201,699977
chr4:36292081-36293372	chr4	+	36292110	36292892	True	NM_001170700,NM_015230,NM_001136536	chr4,chr4,chr4	+,-,+	DTHD1,ARAP2,DTHD1	-6529,-46131,-8929
chr17:80414999-80416011	chr17	+	80415048	80416000	True	NR_036519,NM_031968,NM_001038618,NM_001193657,NR_036516,NM_001193653,NM_012336,NM_001033046,NM_001100408,NR_036514,NR_036517,NM_001193654,NM_001083608,NR_036518,NM_001100407,NM_001193655	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,+,-,-,-,+,-,-,-,-,-,+,-,-,-	C17orf62,NARF,NARF,C17orf62,C17orf62,C17orf62,NARF,C17orf62,C17orf62,C17orf62,C17orf62,C17orf62,NARF,C17orf62,C17orf62,C17orf62	-6341,539,59,-6341,-6341,-6341,539,-6341,-6341,-6341,-6341,-6341,539,-6341,-6341,-7446
chr16:1968954-1969423	chr16	+	1968981	1969227	True	NM_001009606,NM_004548	chr16,chr16	-,+	HS3ST6,NDUFB10	-750,40289
chr12:58119141-58119672	chr12	+	58119143	58119646	True	NM_001122772,NR_027032	chr12,chr12	-,+	AGAP2,LOC100130776	12433,376
chr19:38865677-38866119	chr19	+	38866009	38866139	True	NM_152657,NM_002812	chr19,chr19	-,+	GGN,PSMD8	12579,-870
chr15:77285718-77286561	chr15	+	77285737	77286505	True	NM_003978,NM_001168412	chr15,chr15	+,-	PSTPIP1,TSPAN3	959,77115
chr15:78912546-78912777	chr15	+	78912598	78912710	True	NM_001166694,NM_000743,NM_000745	chr15,chr15,chr15	-,-,+	CHRNA3,CHRNA3,CHRNA5	977,977,-54787
chr11:3820488-3821896	chr11	+	3820766	3821681	True	NR_027018,NM_005387,NM_139131,NM_139132,NM_014489,NR_027016,NR_027017,NR_027014,NR_027015,NM_001145438,NM_016320	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,-,-,-,+,+,+,+,+,+,-	PGAP2,NUP98,NUP98,NUP98,PGAP2,PGAP2,PGAP2,PGAP2,PGAP2,PGAP2,NUP98	7558,-1744,-1744,-1744,8084,8084,-1633,-1869,-1691,-1774,-1744
chr20:10415992-10416719	chr20	+	10416019	10416772	True	NM_170784,NM_018848,NM_001009608	chr20,chr20,chr20	-,-,+	MKKS,MKKS,C20orf94	-1153,-3449,-119
chr6:78172892-78173107	chr6	+	78172913	78173037	True	NM_000863,NM_001010844	chr6,chr6	-,+	HTR1B,IRAK1BP1	133,1404151
chr12:5403612-5404352	chr12	+	5403643	5404331	True	NM_006422,NM_001102654	chr12,chr12	-,+	AKAP3,NTF3	-649300,136948
chr7:102986314-102986871	chr7	+	102986420	102986576	True	NM_001204453,NM_001129887,NM_002803,NM_014377	chr7,chr7,chr7,chr7	+,-,+,-	PSMC2,DNAJC2,PSMC2,DNAJC2	1394,-1100,1394,-1100
chr17:18625408-18626224	chr17	+	18625556	18626198	True	NM_001145045,NM_001037330	chr17,chr17	-,+	ZNF286B,TRIM16L	-39984,-205
chr17:18625408-18626224	chr17	-	15546073	15546123	False	NM_006382,NM_001130842	chr17,chr17	-,+	CDRT1,ZNF286A	-23055,56767
chr1:156268192-156268723	chr1	+	156268446	156268675	True	NM_144580,NM_032323,NM_001004319	chr1,chr1,chr1	-,+,-	C1orf85,TMEM79,VHLL	-2997,-14434,810
chr6:27783131-27783466	chr6	+	27783175	27783365	True	NM_003536,NM_003521,NM_021066,NM_021968,NM_003509,NM_003519	chr6,chr6,chr6,chr6,chr6,chr6	+,+,-,+,+,-	HIST1H3H,HIST1H2BM,HIST1H2AJ,HIST1H4J,HIST1H2AI,HIST1H2BL	-5384,-404,-657,8537,-7249,-7466
chr1:211667801-211668922	chr1	+	211667889	211668971	True	NM_183059,NM_001164688,NR_026761	chr1,chr1,chr1	-,-,+	RD3,RD3,C1orf97	-1630,-1630,-111844
chr22:51219694-51220135	chr22	+	51220044	51220182	True	NM_001003789,NM_001130919,NM_001130920,NM_001130921,NM_001130922,NM_001130923	chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,-,-	RABL2B,RABL2B,RABL2B,RABL2B,RABL2B,RABL2B	1955,1955,1955,1955,1955,1955
chr8:6837670-6839203	chr8	+	6837900	6839182	True	NM_001042500,NM_018361,NM_004084,NR_036687,NR_036686	chr8,chr8,chr8,chr8,chr8	-,+,-,-,-	DEFA1B,AGPAT5,DEFA1,DEFT1P2,DEFT1P	-286,-272073,-286,8111,8111
chr8:6837670-6839203	chr8	+	6857568	6858292	False	NM_001042500,NM_004084,NM_001164452,NR_036687,NR_036686	chr8,chr8,chr8,chr8,chr8	-,-,+,-,-	DEFA1B,DEFA1,FAM90A14,DEFT1P2,DEFT1P	-844,-844,256133,8104,8104
chr3:122419981-122420431	chr3	+	122420082	122420317	True	NM_024610,NM_017554	chr3,chr3	-,+	HSPBAP1,PARP14	92384,-20462
chr20:2675485-2677040	chr20	+	2675524	2676844	True	NM_174856,NM_001110514	chr20,chr20	-,+	IDH3B,EBF4	-30681,-2054
chr6:18264591-18264861	chr6	+	18264590	18264832	True	NM_001134709,NM_153042,NM_003472	chr6,chr6,chr6	-,+,-	DEK,KDM1B,DEK	17,-109022,17
chr4:90230193-90230671	chr4	+	90230347	90230407	True	NM_145715,NM_198281	chr4,chr4	+,-	TIGD2,GPRIN3	-196430,-1186
chr8:81396526-81397867	chr8	+	81396874	81397803	True	NM_005079,NM_023929,NM_001105539	chr8,chr8,chr8	-,+,+	TPD52,ZBTB10,ZBTB10	-313038,644,644
chrX:103811650-103813376	chrX	+	103811689	103813241	True	NM_153448,NM_017416	chrX,chrX	-,+	ESX1,IL1RAPL2	-312090,-744
chr9:99382060-99383515	chr9	+	99382579	99383484	True	NR_026792,NM_003671,NM_033331	chr9,chr9,chr9	+,-,-	LOC441455,CDC14B,CDC14B	104618,-467,-467
chr12:68726416-68728096	chr12	+	68726578	68728109	True	NM_020128,NM_017440,NM_001205028,NM_001205029,NM_001010942	chr12,chr12,chr12,chr12,chr12	-,-,-,-,+	MDM1,MDM1,MDM1,MDM1,RAP1B	-417,-417,-417,-417,276542
chr22:42396793-42397358	chr22	+	42396856	42397358	True	NM_152613,NM_024053	chr22,chr22	+,-	WBP2NL,CENPM	-2178,-53708
chr9:71629121-71629511	chr9	+	71629213	71629493	True	NM_000144,NM_002732	chr9,chr9	+,-	FXN,PRKACG	20985,-174
chr6:33251949-33253001	chr6_qbl_hap6	+	4484278	4485122	False	NM_014260,NM_001185181,NM_003782,NM_001164267,NM_005452	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	+,+,+,-,-	PFDN6,PFDN6,B3GALT4,WDR46,WDR46	4498,4532,-7174,4493,4493
chr6:33251949-33253001	chr6_mcf_hap5	+	4725783	4726627	False	NM_014260,NM_003782,NM_001164267,NM_005452	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	+,+,-,-	PFDN6,B3GALT4,WDR46,WDR46	4494,-7144,4489,4489
chr6:33251949-33253001	chr6_cox_hap2	+	4695849	4696693	False	NM_014260,NM_003782,NM_001164267,NM_005452	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,+,-,-	PFDN6,B3GALT4,WDR46,WDR46	4498,-7174,4493,4493
chr6:33251949-33253001	chr6	+	33252039	33252883	True	NM_014260,NM_001185181,NM_003782,NM_001164267,NM_005452	chr6,chr6,chr6,chr6,chr6	+,+,+,-,-	PFDN6,PFDN6,B3GALT4,WDR46,WDR46	4494,4528,-7174,4489,4489
chr6:33251949-33253001	chr6_dbb_hap3	+	4533361	4534205	False	NM_014260,NM_003782,NM_001164267,NM_005452	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	+,+,-,-	PFDN6,B3GALT4,WDR46,WDR46	4498,-7174,4493,4493
chr5:10662007-10662912	chr5	+	10662016	10662798	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-97632,98639
chr6:158405975-158406553	chr6	+	158405984	158406534	True	NM_003898,NM_032861	chr6,chr6	+,-	SYNJ2,SERAC1	-3147,182828
chr17:33898051-33898857	chr17	+	33898181	33898314	True	NR_003037,NM_000286	chr17,chr17	+,-	SNORD7,PEX12	2361,7399
chr1:161195891-161196185	chr1	+	161195910	161196180	True	NM_001643,NM_032174	chr1,chr1	-,+	APOA2,TOMM40L	-2492,-128
chr2:29029822-29030244	chr2	+	29029888	29030074	True	NM_182756,NM_001142634,NM_001008779,NM_017910	chr2,chr2,chr2,chr2	+,+,+,-	SPDYA,SPDYA,SPDYA,TRMT61B	3625,3625,8788,63157
chr20:48600874-48601194	chr20	+	48600924	48601170	True	NM_006038,NM_005985	chr20,chr20	-,+	SPATA2,SNAI1	-68844,-1462
chr12:41086293-41086589	chr12	+	41086315	41086468	True	NM_175038,NM_001843,NM_052885	chr12,chr12,chr12	+,+,-	CNTN1,CNTN1,SLC2A13	-8,-8,-586654
chr1:100232192-100232905	chr1	+	100232196	100232814	True	NR_037516,NM_001013660	chr1,chr1	+,-	MIR548AA1,FRRS1	-77637,-847
chrX:117862321-117863987	chrX	+	117862420	117863972	True	NM_001560,NM_020721	chrX,chrX	+,-	IL13RA1,KIAA1210	-919,420620
chr17:66284434-66285080	chr17	+	66284619	66285074	True	NM_004694,NM_001174166,NM_014960	chr17,chr17,chr17	-,-,+	SLC16A6,SLC16A6,ARSG	2382,2382,-29347
chr17:42245594-42246097	chr17	+	42245631	42246069	True	NM_178542,NM_080863	chr17,chr17	-,+	C17orf65,ASB16	18063,2004
chr5:172199520-172200201	chr5	+	172199627	172199934	True	NM_004417,NM_001031711	chr5,chr5	-,+	DUSP1,ERGIC1	-1424,61288
chr6:10583089-10583600	chr6	+	10583091	10583598	True	NM_001145020,NM_145655	chr6,chr6	-,+	C6orf52,GCNT2	111292,2394
chrX:74634387-74634902	chrX	+	74634560	74634956	True	NM_001146256,NR_030774	chrX,chrX	-,+	ZDHHC15,UPRT	108439,-140720
chr6:41302132-41302614	chr6	+	41302231	41302601	True	NM_001199510,NM_004828,NM_001199509,NM_018643	chr6,chr6,chr6,chr6	+,+,+,-	NCR2,NCR2,NCR2,TREM1	926,926,926,-47774
chr21:46789652-46790971	chr21	+	46789990	46790946	True	NM_130445,NR_028082	chr21,chr21	+,-	COL18A1,NCRNA00175	34150,54059
chr11:67438592-67438896	chr11	+	67438597	67438815	True	NM_007103,NM_000695,NM_001031615	chr11,chr11,chr11	+,-,-	NDUFV1,ALDH3B2,ALDH3B2	-64325,3337,9920
chr12:50098416-50099881	chr12	+	50098665	50099823	True	NM_198900,NM_175736,NM_003217	chr12,chr12,chr12	-,-,+	FMNL3,FMNL3,TMBIM6	1424,1424,35469
chr11:47396179-47396544	chr11	+	47396220	47396528	True	NM_003120,NM_001128225,NM_001080547	chr11,chr11,chr11	-,+,-	SPI1,SLC39A13,SPI1	3649,33517,3649
chr1:8019811-8021300	chr1	+	8020540	8021346	True	NM_001561,NM_007262,NM_001123377	chr1,chr1,chr1	-,+,+	TNFRSF9,PARK7,PARK7	-17315,367,367
chr11:124796923-124797641	chr11	+	124797047	124797617	True	NM_152722,NM_001037558	chr11,chr11	-,+	HEPACAM,HEPN1	8753,-7960
chr12:52463379-52463683	chr12	+	52463455	52463671	True	NM_001098673,NM_021934,NM_001081492	chr12,chr12,chr12	+,+,-	C12orf44,C12orf44,KRT80	86,86,122163
chr13:43142793-43143538	chr13	+	43142827	43143304	True	NM_003701,NM_033012,NM_001002264	chr13,chr13,chr13	+,+,-	TNFSF11,TNFSF11,EPSTI1	4986,-6006,423124
chr19:17000550-17000840	chr19	+	17000604	17000882	True	NM_003950,NM_015692	chr19,chr19	+,-	F2RL3,CPAMD8	-829,136793
chr7:74187196-74187660	chr7	+	74187195	74187267	True	NM_173537,NM_000265	chr7,chr7	-,+	GTF2IRD2,NCF1	80624,1041
chr7:74187196-74187660	chr7	-	74588863	74588935	False	NM_001003795,NR_003187	chr7,chr7	+,-	GTF2IRD2B,NCF1C	-80567,-1047
chr7:74187196-74187660	chr7	+	72633494	72633566	False	NR_002164,NR_003186	chr7,chr7	-,+	GTF2IRD2P1,NCF1B	52142,1107
chr9:46301055-46302782	chr9	+	46301550	46302716	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2670820,384849
chr9:46301055-46302782	chr9	+	67710485	67711655	False	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	82584,215105
chr9:46301055-46302782	chr9	-	45080464	45081630	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-90279,-1449734
chr9:46301055-46302782	chr9	-	45815206	45815256	False	NM_001145196,NR_024060	chr9,chr9	-,+	FAM75A6,FAM27A	-2184476,-88228
chr9:46301055-46302782	chr9	-	46201521	46202672	False	NM_001145196,NR_024060	chr9,chr9	-,+	FAM75A6,FAM27A	-2570791,-474543
chr9:34447501-34447960	chr9	+	34447521	34447734	True	NM_001184940,NM_012144	chr9,chr9	-,+	C9orf25,DNAI1	10891,11076
chr5:81046917-81047182	chr5	+	81047034	81047094	True	NM_001131028,NM_012446	chr5,chr5	+,-	ATG10,SSBP2	220749,28
chr9:35079221-35079455	chr9	+	35079302	35079472	True	NM_007126,NM_203299,NM_004629	chr9,chr9,chr9	-,+,-	VCP,C9orf131,FANCG	-6563,-37130,591
chr22:23891439-23891656	chr22	+	23891541	23891609	True	NM_153615,NM_020070	chr22,chr22	+,-	RGL4,IGLL1	141438,30936
chrX:48779770-48780396	chrX	+	48779849	48780389	True	NM_006875,NM_001167992	chrX,chrX	-,+	PIM2,PQBP1	-3436,-24125
chr20:23398075-23399438	chr20	+	23398219	23399046	True	NM_138283,NM_022080	chr20,chr20	+,-	CSTL1,NAPB	21275,3173
chr16:3142746-3143151	chr16	+	3142771	3143137	True	NM_001042428,NM_032805	chr16,chr16	+,-	ZNF205,ZSCAN10	19425,90
chr12:95468029-95468461	chr12	+	95468326	95468415	True	NM_001127362,NM_017599,NM_001032287,NM_003297	chr12,chr12,chr12,chr12	-,+,-,-	NR2C1,VEZT,NR2C1,NR2C1	-922,143106,-922,-922
chr15:81068904-81070482	chr15	+	81068971	81070510	True	NM_018689,NR_030393	chr15,chr15	+,-	KIAA1199,MIR549	1201,63954
chr3:50355880-50356150	chr3	+	50355926	50356117	True	NM_007275,NM_007022,NM_033158,NM_153281,NM_003773	chr3,chr3,chr3,chr3,chr3	-,+,-,-,-	TUSC2,CYB561D2,HYAL2,HYAL1,HYAL2	9602,32179,4215,-6114,4215
chr5:176518220-176518653	chr5	+	176518328	176518410	True	NM_213647,NM_022963,NM_001199298,NM_002011	chr5,chr5,chr5,chr5	+,+,-,+	FGFR4,FGFR4,UIMC1,FGFR4	-4458,-1828,-84533,-4458
chr6:27841386-27842136	chr6	+	27841568	27842018	True	NM_003546,NM_003511,NM_003533,NM_005322	chr6,chr6,chr6,chr6	-,+,-,-	HIST1H4L,HIST1H2AL,HIST1H3I,HIST1H1B	-279,-8512,-1469,-6209
chr3:5020598-5020827	chr3	+	5020635	5020707	True	NR_037903,NM_003670	chr3,chr3	-,+	LOC100507582,BHLHE40	-72449,389
chr2:238766779-238767457	chr2	+	238766783	238767386	True	NM_005855,NR_033308	chr2,chr2	+,-	RAMP1,RAB17	800,-267014
chr22:51017767-51018325	chr22	+	51017845	51018343	True	NM_001145137,NM_001145136,NM_001145135,NM_001145134,NR_021492,NM_005198,NM_152245,NR_027928,NM_004377,NM_152246	chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,+,-,-,-,-,-	CPT1B,CPT1B,CPT1B,CPT1B,LOC100144603,CHKB,CPT1B,CHKB-CPT1B,CPT1B,CPT1B	-1339,-749,-749,-749,3111,3135,-749,3135,-951,-951
chr17:61958890-61960002	chr17	+	61958986	61959810	True	NM_020991,NM_022645,NM_022644,NM_022557,NM_022556,NR_002947,NM_002059,NM_022558	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,+,-,-	CSH2,CSH2,CSH2,GH2,GH2,TCAM1P,GH2,GH2	-7897,-7897,-7897,-179,-179,-24661,-179,-179
chr5:10251273-10253157	chr5	+	10251321	10253159	True	NM_199133,NM_012073	chr5,chr5	-,+	FAM173B,CCT5	-1307,-1090
chr6:152480673-152481466	chr6	+	152480676	152481500	True	NM_000125,NM_133650	chr6,chr6	+,-	ESR1,SYNE1	-351913,19151
chr5:61700361-61701655	chr5	+	61700624	61701089	True	NM_014473,NM_016338	chr5,chr5	-,+	DIMT1L,IPO11	-896,7483
chr16:23563329-23563785	chr16	+	23563374	23563753	True	NM_019116,NR_003501,NM_001083614	chr16,chr16,chr16	+,-,-	UBFD1,EARS2,EARS2	5108,5000,5000
chr6:83901733-83902640	chr6	+	83902001	83902562	True	NM_001199917,NM_001199918,NM_001199919,NM_015599,NM_033411	chr6,chr6,chr6,chr6,chr6	-,-,-,-,+	PGM3,PGM3,PGM3,PGM3,RWDD2A	1144,501,501,501,469
chr10:72576247-72576934	chr10	+	72576354	72576769	True	NM_003901,NM_152710	chr10,chr10	+,-	SGPL1,C10orf27	-702,-31197
chr19:46544598-46546277	chr19	+	46544788	46546271	True	NR_030412,NM_001002923	chr19,chr19	+,-	MIR769,IGFL4	-22649,-514
chr11:40313394-40314564	chr11	+	40313401	40314419	True	NM_020929,NM_001142930	chr11,chr11	-,+	LRRC4C,API5	1295,3019085
chr7:12251124-12251348	chr7	+	12251171	12251397	True	NM_018374,NM_001135924,NM_001134232	chr7,chr7,chr7	+,-,+	TMEM106B,VWDE,TMEM106B	-374,192505,-374
chrY:20749415-20751147	chrY	+	20749439	20750819	True	NR_001530,NR_002159,NR_003510	chrY,chrY,chrY	-,-,+	TTTY9A,TTTY9B,HSFY1	1646,1646,-40913
chrY:20749415-20751147	chrY	-	20893355	20894735	False	NR_001530,NM_001001877,NR_002159	chrY,chrY,chrY	+,-,+	TTTY9A,HSFY2,TTTY9B	-1646,40916,-1646
chr7:72350929-72352020	chr7	+	72350933	72352010	True	NR_003666,NM_172020	chr7,chr7	-,+	SPDYE7P,POM121	-11278,-1048
chr7:72350929-72352020	chr7	+	102005335	102006364	False	NM_024653,NM_001146210	chr7,chr7	+,-	PRKRIP1,SPDYE6	30439,-8446
chr7:72350929-72352020	chr7	-	75113586	75113683	False	NM_001099415,NM_001099435	chr7,chr7	-,+	POM121C,SPDYE5	1935,10615
chr7:72350929-72352020	chr7	+	76179655	76180727	False	NR_029411,NM_012230,NR_003262	chr7,chr7,chr7	+,-,-	LOC100133091,POMZP3,FDPSL2A	-1493,75944,-75338
chr19:21265430-21265934	chr19	+	21265508	21265804	True	NM_182515,NM_021269	chr19,chr19	+,-	ZNF714,ZNF708	-607,246464
chr1:8484692-8485030	chr1	+	8484750	8485078	True	NM_001042682,NM_001080397	chr1,chr1	-,+	RERE,SLC45A1	-1003,-100411
chr15:80989354-80990496	chr15	+	80989441	80990349	True	NM_021214,NR_030393	chr15,chr15	+,-	FAM108C1,MIR549	-1841,144116
chr5:3597371-3597634	chr5	+	3597377	3597667	True	NR_033898,NM_024337	chr5,chr5	-,+	LOC285577,IRX1	-61169,-1260
chr14:101122585-101123388	chr14	+	101122681	101123415	True	NR_024096,NM_020836	chr14,chr14	+,-	C14orf70,BEGAIN	189,-86550
chr8:11724848-11725071	chr8	+	11724848	11725112	True	NM_001908,NM_147782,NM_147783,NM_147780,NM_147781,NM_004462	chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,-,+	CTSB,CTSB,CTSB,CTSB,CTSB,FDFT1	584,584,584,584,584,-64709
chr19:11493888-11494266	chr19	+	11494112	11494202	True	NM_000121,NM_175871,NR_033663	chr19,chr19,chr19	-,+,-	EPOR,C19orf39,EPOR	866,-8780,866
chr15:89530540-89530822	chr15	+	89530554	89530796	True	NM_007011,NM_005928	chr15,chr15	+,-	ABHD2,MFGE8	100584,-73891
chr1:18435775-18436099	chr1	+	18435846	18435990	True	NM_032880,NM_018715	chr1,chr1	+,-	IGSF21,RCC2	-1657,-669626
chr3:196261931-196262939	chr3	+	196262159	196262987	True	NM_001105573,NM_001077657	chr3,chr3	+,-	FBXO45,C3orf43	32737,-19922
chr2:34080396-34081278	chr2	+	34080469	34081155	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-341580,-127185
chr8:492244-492785	chr8	+	492258	492530	True	NM_175075,NM_183421	chr8,chr8	-,+	C8orf42,FBXO25	2857,-135501
chr15:43985880-43986085	chr15	+	43985880	43986116	True	NM_001015001,NM_172097	chr15,chr15	+,-	CKMT1A,CATSPER2	-847,-44841
chr15:43985880-43986085	chr15	+	43886048	43886284	False	NM_001190214,NM_014659,NM_001130858,NM_001130859,NM_020990	chr15,chr15,chr15,chr15,chr15	-,-,-,-,+	PPIP5K1,PPIP5K1,PPIP5K1,PPIP5K1,CKMT1B	-3597,-8958,-3597,-3597,-847
chr11:85758997-85759595	chr11	+	85759148	85759419	True	NM_001008660,NM_173556	chr11,chr11	-,+	PICALM,CCDC83	20740,-193055
chr13:28676485-28677143	chr13	+	28676678	28676876	True	NM_004119,NM_175854	chr13,chr13	-,+	FLT3,PAN3	-1949,35766
chr8:22847542-22847958	chr8	+	22847588	22847959	True	NM_015178,NM_001160037,NM_001160036,NM_144962	chr8,chr8,chr8,chr8	+,+,+,-	RHOBTB2,RHOBTB2,RHOBTB2,PEBP4	9132,5401,-2729,-62167
chr1:145979976-145980415	chr1	+	145980079	145980292	True	NR_003377,NM_001097616	chr1,chr1	-,+	PDZK1P1,GPR89C	-37460,-96265
chr1:145979976-145980415	chr1	+	147521812	147522025	False	NR_003377,NM_001097616	chr1,chr1	-,+	PDZK1P1,GPR89C	-37481,-96299
chr20:61571003-61571313	chr20	+	61571007	61571252	True	NM_033081,NM_017896,NM_022105,NM_080797	chr20,chr20,chr20,chr20	-,+,-,-	DIDO1,C20orf11,DIDO1,DIDO1	-1703,-1617,-1703,-1703
chr1:108731495-108732329	chr1	+	108731526	108732165	True	NM_213651,NM_001143987	chr1,chr1	-,+	SLC25A24,NBPF6	3256,260738
chr14:90420917-90422158	chr14	+	90421165	90422059	True	NM_145231,NM_018319,NM_001008744	chr14,chr14,chr14	-,+,+	EFCAB11,TDP1,TDP1	-76,186,186
chr14:35337729-35338335	chr14	+	35338011	35338109	True	NR_002937,NM_182648,NM_013448	chr14,chr14,chr14	+,-,-	C14orf19,BAZ1A,BAZ1A	71018,6804,6804
chr4:49514082-49514441	chr4	+	49514349	49514491	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-526135,-605534
chr9:127270542-127271374	chr9	+	127270545	127271379	True	NM_004959,NM_001161808	chr9,chr9	-,+	NR5A1,GPR144	-846,-57173
chr2:219266359-219266793	chr2	+	219266506	219266688	True	NM_022152,NM_021198,NM_182642,NR_029500	chr2,chr2,chr2,chr2	-,+,+,+	TMBIM1,CTDSP1,CTDSP1,MIR26B	-109226,-2079,-1743,680
chr17:38257115-38257342	chr17	+	38257235	38257357	True	NM_001012241,NM_021724	chr17,chr17	+,-	MSL1,NR1D1	21432,-262
chr1:11361404-11363122	chr1	+	11361408	11362900	True	NM_004958,NM_013319	chr1,chr1	-,+	MTOR,UBIAD1	-38800,-28211
chr8:29385217-29386140	chr8	+	29385272	29386163	True	NR_024473,NM_001394	chr8,chr8	+,-	LOC286135,DUSP4	392865,-177005
chr5:175817105-175817521	chr5	+	175817201	175817337	True	NM_138820,NM_016391	chr5,chr5	+,-	HIGD2A,NOP16	-1471,-1661
chr1:62900910-62901680	chr1	+	62901098	62901558	True	NM_001017415,NM_001017416,NM_181712,NM_003368	chr1,chr1,chr1,chr1	+,+,-,+	USP1,USP1,KANK4,USP1	416,416,-116015,824
chr11:32910146-32912012	chr11	+	32910331	32911821	True	NM_001008391,NM_001076786	chr11,chr11	-,+	CCDC73,QSER1	-94144,2970
chr12:54125856-54126152	chr12	+	54125874	54126192	True	NR_026554,NM_001143682,NM_020898,NM_017410	chr12,chr12,chr12,chr12	-,-,-,+	CALCOCO1,CALCOCO1,CALCOCO1,HOXC13	-4567,-4567,-4567,206383
chr3:113746182-113747425	chr3	+	113746553	113746867	True	NM_020817,NM_024638	chr3,chr3	-,+	KIAA1407,QTRTD1	28643,28743
chr1:32826633-32826864	chr1	+	32826705	32826905	True	NM_052841,NM_001167676	chr1,chr1	+,-	TSSK3,LOC100128071	956,989
chr12:57414598-57416499	chr12	+	57414719	57416310	True	NR_033654,NM_007264,NM_013251,NM_001178054	chr12,chr12,chr12,chr12	-,+,-,-	TAC3,GPR182,TAC3,TAC3	-4375,-26416,-4375,-4375
chr20:62712166-62712758	chr20	+	62712170	62712686	True	NM_182647,NM_001007125,NM_001039467,NM_001200019,NM_000913,NM_005873	chr20,chr20,chr20,chr20,chr20,chr20	+,-,-,+,+,-	OPRL1,C20orf201,RGS19,OPRL1,OPRL1,RGS19	-750,3076,-846,3682,-750,-1325
chr5:43549520-43550119	chr5	+	43549737	43550166	True	NM_182789,NM_006451,NM_012343,NM_183323	chr5,chr5,chr5,chr5	-,-,+,-	PAIP1,PAIP1,NNT,PAIP1	7080,7080,52624,7406
chr11:14511201-14512887	chr11	+	14511603	14512935	True	NM_001144062,NM_016451,NM_001144061,NM_000922	chr11,chr11,chr11,chr11	-,-,-,+	COPB1,COPB1,COPB1,PDE3B	8530,8519,8556,152333
chr12:108956488-108956824	chr12	+	108956499	108956821	True	NM_213595,NM_014301,NM_014706	chr12,chr12,chr12	+,+,-	ISCU,ISCU,SART3	-256,-256,-1334
chr1:149813859-149814125	chr1	+	149813881	149813959	True	NM_001040874,NM_001005464,NM_003548,NR_036461,NM_001034077,NM_003516,NM_021059	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,+,-,+,-,-	HIST2H2AA4,HIST2H3A,HIST2H4A,HIST2H2BC,HIST2H4B,HIST2H2AA3,HIST2H3C	409,-1116,-9711,8431,-9711,409,-1116
chr1:149813859-149814125	chr1	-	149822986	149823064	False	NM_001040874,NM_001005464,NM_003548,NR_036461,NM_001034077,NM_003516,NM_021059	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,-,-,+,+	HIST2H2AA4,HIST2H3A,HIST2H4A,HIST2H2BC,HIST2H4B,HIST2H2AA3,HIST2H3C	-409,1116,9711,-646,9711,-409,1116
chr19:12817008-12817340	chr19	+	12817043	12817330	True	NM_032301,NR_002751,NM_004317	chr19,chr19,chr19	-,-,+	FBXW9,SNORD41,ASNA1	-9588,53,30975
chr12:49487680-49487962	chr12	+	49487790	49487926	True	NM_021044,NM_005430	chr12,chr12	-,+	DHH,WNT1	726,-115605
chr22:17691373-17692740	chr22	+	17691386	17692310	True	NM_017424,NR_024483	chr22,chr22	-,+	CECR1,CECR4	-607,-51158
chr3:196445103-196446942	chr3	+	196445402	196446449	True	NM_017861,NM_032898,NM_001166304	chr3,chr3,chr3	+,-,+	PIGX,C3orf34,PIGX	-6221,-6279,-6221
chr5:130503546-130504590	chr5	+	130503828	130504619	True	NM_181705,NR_024611,NR_024610,NM_005340	chr5,chr5,chr5,chr5	+,-,-,-	LYRM7,HINT1,HINT1,HINT1	2021,-2802,-2794,-2794
chr2:99920024-99920350	chr2	+	99920023	99920169	True	NM_174898,NM_015904	chr2,chr2	-,+	LYG1,EIF5B	-2384,33664
chr5:159730510-159731624	chr5	+	159730587	159731563	True	NM_001445,NM_024565	chr5,chr5	+,-	FABP6,CCNJL	-74203,8060
chr11:64912331-64913464	chr11	+	64912776	64913418	True	NM_172230,NR_037568	chr11,chr11	-,+	SYVN1,MRPL49	-10773,-23112
chr21:19739542-19740035	chr21	+	19739570	19740010	True	NM_002772,NM_001204174	chr21,chr21	-,+	TMPRSS15,CHODL	36022,-121438
chr9:67925245-67925701	chr9	+	67925275	67925363	True	NR_027422,NM_001012419,NM_032250	chr9,chr9,chr9	-,+,+	FAM27B,ANKRD20A3,ANKRD20A1	-131086,1397,1397
chr9:67925245-67925701	chr9	+	42366873	42366961	False	NR_003670,NM_001012419,NM_001012421	chr9,chr9,chr9	-,+,+	KGFLP2,ANKRD20A3,ANKRD20A2	-347289,1341,1341
chr6:107432955-107433911	chr6	+	107433257	107433729	True	NM_001080450,NM_016487	chr6,chr6	-,+	BEND3,C6orf203	1963,-83913
chr16:46604488-46605239	chr16	+	46604699	46605231	True	NR_026556,NM_014321	chr16,chr16	-,+	ANKRD26P1,ORC6	-1690,118326
chr15:33355526-33356863	chr15	+	33355585	33356890	True	NM_001036,NM_001103184	chr15,chr15	+,-	RYR3,FMN1	246286,3245
chr8:18042785-18044670	chr8	+	18043006	18044626	True	NM_004315,NM_001160179	chr8,chr8	-,+	ASAH1,NAT1	-100499,-15092
chr2:24233602-24233817	chr2	+	24233659	24233811	True	NM_001080473,NM_001142319	chr2,chr2	+,-	MFSD2B,C2orf44	-757,36535
chr20:31279620-31280081	chr20	+	31279964	31280130	True	NM_006892,NM_182584	chr20,chr20	+,-	DNMT3B,C20orf203	70060,-40181
chrX:69262950-69263835	chrX	+	69263039	69263827	True	NM_001002254,NM_207320	chrX,chrX	-,+	AWAT2,OTUD6A	6011,18513
chr22:31322479-31323995	chr22	+	31322666	31323934	True	NM_014941,NR_026920	chr22,chr22	-,+	MORC2,C22orf27	40303,-4422
chr4:169064942-169065783	chr4	+	169065028	169065830	True	NM_017631,NM_007193	chr4,chr4	-,+	DDX60,ANXA10	174186,-51391
chr16:10910281-10912137	chr16	+	10910533	10912036	True	NM_000246,NM_001079512	chr16,chr16	+,-	CIITA,FAM18A	59018,635
chr1:32478222-32479378	chr1	+	32478361	32479264	True	NM_080391,NM_006559	chr1,chr1	-,+	PTP4A2,KHDRBS1	-74373,226
chr3:129248106-129249225	chr3	+	129248134	129249122	True	NM_000539,NM_015103	chr3,chr3	+,-	RHO,PLXND1	-710,76510
chr6:24628840-24629665	chr6	+	24628890	24629468	True	NM_001168375,NM_001160094	chr6,chr6	-,+	KIAA0319,ACOT13	16831,37794
chr2:163695491-163695760	chr2	+	163695632	163695755	True	NM_033272,NM_012198,NM_173162	chr2,chr2,chr2	-,+,-	KCNH7,GCA,KCNH7	-375,-495100,-375
chr11:116699218-116700124	chr11	+	116699240	116700158	True	NM_000039,NM_000482,NM_000040	chr11,chr11,chr11	-,-,+	APOA1,APOA4,APOC3	8230,-5229,465
chr5:169780215-169780590	chr5	+	169780240	169780588	True	NM_004137,NM_001034838	chr5,chr5	-,+	KCNMB1,KCNIP1	36100,292
chr7:75683222-75683781	chr7	+	75683282	75683828	True	NM_005918,NM_016086	chr7,chr7	+,-	MDH2,STYXL1	-5941,-5961
chr16:88212699-88213034	chr16	+	88212880	88212944	True	NM_001173543,NM_001739	chr16,chr16	+,-	BANP,CA5A	-209307,-242768
chr7:98872707-98873445	chr7	+	98873147	98873305	True	NM_001145715,NR_002147	chr7,chr7	-,+	KPNA7,MYH16	-68058,-2288
chr1:6320571-6320835	chr1	+	6320740	6320862	True	NM_207370,NM_001024598	chr1,chr1	-,+	GPR153,HES3	223,-16539
chr1:197885866-197886416	chr1	+	197885869	197886411	True	NM_001014434,NM_001195216,NM_020204	chr1,chr1,chr1	+,-,+	LHX9,DENND1B,LHX9	-4285,-141246,105
chr10:126852286-126852619	chr10	+	126852326	126852648	True	NM_001083914,NM_001329,NM_017580	chr10,chr10,chr10	-,-,+	CTBP2,CTBP2,ZRANB1	-2702,-3223,-221696
chr12:88511735-88513430	chr12	+	88512076	88512903	True	NM_025114,NM_181783	chr12,chr12	-,+	CEP290,TMTC3	23147,23169
chr17:7756841-7757137	chr17	+	7756888	7757148	True	NM_032356,NM_144607,NM_203411	chr17,chr17,chr17	-,+,+	LSMD1,CYB5D1,TMEM88	4074,3915,1235
chr16:2836421-2837634	chr16	+	2836567	2837635	True	NM_152891,NM_001135086,NM_007108,NM_207013	chr16,chr16,chr16,chr16	-,+,-,-	PRSS33,PRSS41,TCEB2,TCEB2	-7,10850,-9270,-9270
chr6:42695316-42695578	chr6	+	42695387	42695597	True	NM_000322,NR_037141	chr6,chr6	-,+	PRPH2,LOC442211	-5029,-124
chrX:154610591-154610793	chrX	+	154610591	154610765	True	NR_036049,NM_001007524,NM_001007523,NM_012151,NM_080720,NR_036260,NR_036259,NM_001017991,NM_001017990	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,-,-,+,+	MIR1184-1,F8A3,F8A2,F8A1,H2AFB3,MIR1184-3,MIR1184-2,H2AFB2,H2AFB1	2132,998,998,983,-214,2132,2132,-206,-214
chrX:154610591-154610793	chrX	+	154113590	154113654	False	NR_036049,NM_001007524,NM_001007523,NM_012151,NM_080720,NR_036260,NM_019863,NR_036259,NM_001017990	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,-,-,-,+	MIR1184-1,F8A3,F8A2,F8A1,H2AFB3,MIR1184-3,F8,MIR1184-2,H2AFB1	2129,995,995,980,-324,2129,973,2129,-324
chrX:154610591-154610793	chrX	-	154689258	154689432	False	NR_036049,NM_001007524,NM_001007523,NM_012151,NM_080720,NR_036260,NR_036259,NM_001017991,NM_001017990	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,-,-,-,-,+,+,-,-	MIR1184-1,F8A3,F8A2,F8A1,H2AFB3,MIR1184-3,MIR1184-2,H2AFB2,H2AFB1	-2131,-997,-997,-982,214,-2131,-2131,206,214
chr21:30697405-30698946	chr21	+	30697627	30698997	True	NR_027655,NM_006585	chr21,chr21	+,-	BACH1,CCT8	-20118,-251617
chr11:79150183-79150889	chr11	+	79150238	79150847	True	NM_001098816,NM_020798	chr11,chr11	-,+	ODZ4,USP35	898,-1250431
chr5:10633335-10633728	chr5	+	10633613	10633744	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-69229,127693
chr6:4785267-4786682	chr6	+	4785493	4786715	True	NM_006638,NM_004824	chr6,chr6	-,+	RPP40,CDYL	217606,-8874
chr6:41711193-41712184	chr6	+	41711415	41712207	True	NM_001166424,NM_007162,NM_013397,NM_001167827,NM_002630	chr6,chr6,chr6,chr6,chr6	-,-,+,-,-	PGC,TFEB,PRICKLE4,TFEB,PGC	2982,-8617,36292,-7418,2982
chr16:72085063-72086815	chr16	+	72085097	72086453	True	NM_001126102,NM_017853,NM_005143	chr16,chr16,chr16	+,-,+	HP,TXNL4B,HP	2054,41136,2054
chr9:5896700-5897769	chr9	+	5896823	5897805	True	NM_024896,NM_005511	chr9,chr9	-,+	ERMP1,MLANA	-63742,-5965
chr14:73394352-73394657	chr14	+	73394420	73394550	True	NM_181340,NM_181341,NM_015604,NM_012074,NM_001163508,NM_001163509	chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,-,+,+	DCAF4,DCAF4,DCAF4,DPF3,DCAF4,DCAF4	-1431,-1431,-1431,-33611,-1431,-1431
chr20:44716480-44717265	chr20	+	44716513	44717301	True	NM_020967,NM_001250	chr20,chr20	-,+	NCOA5,CD40	1329,29604
chr5:140793688-140794188	chr5	+	140793772	140794150	True	NM_032091,NM_032090,NM_032101,NM_032100,NM_032092,NM_018927,NM_005642,NM_018926,NM_018914,NM_018913	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,-,+,+,+	PCDHGA11,PCDHGA10,PCDHGB7,PCDHGB6,PCDHGA11,PCDHGB7,TAF7,PCDHGB6,PCDHGA11,PCDHGA10	6386,-1081,3063,-6054,6386,3109,-93421,-6054,6386,-1081
chr1:162348595-162349122	chr1	+	162348598	162349142	True	NM_001135240,NM_001085375,NM_182581	chr1,chr1,chr1	+,+,-	C1orf226,C1orf226,C1orf111	47,2377,-1954
chr2:130688900-130689214	chr10	-	81895403	81895468	False	NM_001012973,NR_027432	chr10,chr10	+,-	PLAC9,LOC219347	-3203,-56454
chr2:130688900-130689214	chr22	+	16371722	16371792	False	NM_001005239,NR_001591	chr22,chr22	-,+	OR11H1,psiTPTE22	78062,711008
chr2:130688900-130689214	chr2	+	130688906	130688980	True	NR_026740,NM_032144	chr2,chr2	-,+	LOC389033,RAB6C	2960,48254
chr2:130688900-130689214	chr14	+	20104104	20104174	False	NM_001197287,NM_172194	chr14,chr14	-,+	OR11H2,OR4Q3	78367,111412
chr6:28186085-28186475	chr6	+	28186191	28186409	True	NR_002936,NM_001199479,NM_006299,NM_001199480	chr6,chr6,chr6,chr6	-,+,+,+	LOC222699,ZNF193,ZNF193,ZNF193	350,6619,6619,6619
chr9:36570644-36571762	chr9	+	36570901	36571442	True	NM_014791,NM_194330	chr9,chr9	+,-	MELK,RNF38	1462,-169706
chr6:43858672-43859215	chr6	+	43858780	43859206	True	NR_024478,NM_018135	chr6,chr6	+,-	LOC100132354,MRPS18A	-67,-203231
chr16:56965116-56965827	chr16	+	56965181	56965493	True	NM_001010990,NM_001010989,NM_014685,NM_024946	chr16,chr16,chr16,chr16	+,+,+,-	HERPUD1,HERPUD1,HERPUD1,FAM192A	254,254,254,254533
chr1:198648960-198649265	chr1	+	198648959	198649217	True	NM_080921,NM_133326	chr1,chr1	+,-	PTPRC,ATP6V1G3	-40873,-138884
chr5:158895475-158896995	chr5	+	158895498	158896786	True	NR_037889,NR_027110	chr5,chr5	+,-	LOC285626,LOC285627	-137023,-2214
chr16:56665868-56666143	chr16	+	56665933	56666117	True	NM_005946,NM_175617,NR_036677,NM_176870,NM_005950	chr16,chr16,chr16,chr16,chr16	+,+,+,+,-	MT1A,MT1E,MT1JP,MT1M,MT1G	6460,-6399,3533,416,35910
chr5:119799382-119799919	chr5	+	119799382	119799729	True	NM_173666,NM_016644	chr5,chr5	-,+	DTWD2,PRR16	-1475142,289
chr11:64704196-64705763	chr11	+	64704243	64705769	True	NM_006244,NM_130769	chr11,chr11	+,-	PPP2R5B,GPHA2	-12151,-883
chr4:10022485-10022979	chr4	+	10022641	10022913	True	NM_000798,NM_020041	chr4,chr4	+,-	DRD5,SLC2A9	-239434,251
chr13:33112548-33113008	chr13	+	33112624	33113037	True	NM_014887,NM_015032,NM_033111	chr13,chr13,chr13	-,+,-	N4BP2L2,PDS5B,N4BP2L2	45,47526,49
chr11:64851982-64853014	chr11	+	64852207	64853036	True	NM_006782,NM_080668	chr11,chr11	+,-	ZFPL1,CDCA5	-564,-592
chr16:21177853-21178857	chr16	+	21178028	21178856	True	NM_020422,NM_017539	chr16,chr16	+,-	TMEM159,DNAH3	-8167,-7266
chr12:121839960-121840919	chr12	+	121840166	121840923	True	NM_001137559,NM_194271,NM_025126	chr12,chr12,chr12	-,+,+	ANAPC5,RNF34,RNF34	-48154,-2322,-2322
chr6:148663791-148664060	chr6	+	148663799	148663887	True	NR_034115,NM_015278	chr6,chr6	-,+	LOC729178,SASH1	-1138049,-121
chr19:3480817-3481587	chr19	+	3480853	3481566	True	NM_016263,NM_001136503	chr19,chr19	+,-	FZR1,C19orf77	24728,-313
chr11:1704705-1705089	chr11	+	1704899	1705073	True	NR_026642,NM_001012416	chr11,chr11	-,+	FAM99B,KRTAP5-6	1836,13351
chr11:1704705-1705089	chr11	-	1688122	1688296	False	NR_026642,NR_026643	chr11,chr11	-,+	FAM99B,FAM99A	18623,-1344
chrX:19940214-19940872	chrX	+	19940347	19940704	True	NM_031892,NM_001173456	chrX,chrX	-,+	SH3KBP1,PDHA1	-34603,-578399
chr6:695462-696802	chr6	+	695543	696690	True	NM_018303,NR_036585	chr6,chr6	-,+	EXOC2,IRF4	-2434,-303855
chr1:28286570-28286797	chr1	+	28286577	28286729	True	NM_002946,NM_018053	chr1,chr1	-,+	RPA2,XKR8	-45341,-124
chr9:6753965-6755091	chr9	+	6754152	6754836	True	NM_000170,NM_015061,NM_001146695,NM_001146694	chr9,chr9,chr9,chr9	-,+,+,+	GLDC,KDM4C,KDM4C,KDM4C	-108460,2804,2804,2804
chr3:122498181-122498893	chr11	-	82845253	82845367	False	NM_015885,NM_014488	chr11,chr11	+,-	PCF11,RAB30	22769,-62369
chr3:122498181-122498893	chr3	+	122498222	122498336	True	NM_024610,NM_032839	chr3,chr3	-,+	HSPBAP1,DIRC2	14372,15564
chr3:122498181-122498893	chr1	+	115110846	115112644	False	NM_003176,NM_005872	chr1,chr1	+,-	SYCP1,BCAS2	284810,13413
chr5:173164007-173164708	chr5	+	173164119	173164733	True	NM_030627,NM_138369	chr5,chr5	+,-	CPEB4,BOD1	150597,-120453
chrX:49029081-49030130	chrX	+	49029279	49030115	True	NM_002668,NM_006150,NM_001099680	chrX,chrX,chrX	+,-,+	PLP2,PRICKLE3,MAGIX	-1160,12711,-9074
chr7:100254147-100254689	chr7	+	100254216	100254737	True	NM_005273,NM_016188	chr7,chr7	+,-	GNB2,ACTL6B	16625,-132
chr5:10585811-10587285	chr5	+	10585821	10586804	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-21437,174636
chr3:25704918-25705410	chr3	+	25704969	25705223	True	NM_001068,NM_001145391	chr3,chr3	-,+	TOP2B,OXSM	615,126339
chr22:35536727-35537093	chr22	+	35536831	35537065	True	NM_001008494,NM_005368	chr22,chr22	+,-	ISX,MB	-74760,476369
chrX:35943932-35944234	chrX	+	35944118	35944255	True	NM_152632,NM_031442	chrX,chrX	+,-	CXorf22,TMEM47	-6325,-1268713
chr19:58192832-58193342	chr19	+	58193014	58193300	True	NM_001085384,NM_138347	chr19,chr19	-,+	ZNF154,ZNF551	27329,56
chr2:26785632-26785832	chr2	+	26785683	26785843	True	NM_001105519,NM_194248	chr2,chr2	+,-	C2orf70,OTOF	-253,-4117
chr12:56365976-56367014	chr12	+	56366059	56366751	True	NM_001798,NM_002868,NM_001200053,NM_006928,NM_001200054,NM_052827	chr12,chr12,chr12,chr12,chr12,chr12	+,+,-,-,-,+	CDK2,RAB5B,PMEL,PMEL,PMEL,CDK2	-5554,1110,-6213,-5563,-6213,-5554
chr8:67580911-67581879	chr8	+	67581005	67581490	True	NM_019607,NM_001204173,NM_025054	chr8,chr8,chr8	+,+,-	C8orf44,C8orf44-SGK3,VCPIP1	-1276,-1276,-1553
chr15:48468916-48470046	chr15	+	48469066	48469982	True	NM_001145668,NM_016132	chr15,chr15	+,-	CTXN2,MYEF2	13884,626
chr17:37122798-37123501	chr17	+	37123003	37123542	True	NR_033753,NM_001008777	chr17,chr17	+,-	FLJ43826,FBXO47	62616,163
chr19:17623209-17623919	chr19	+	17623247	17623887	True	NM_012088,NM_138454	chr19,chr19	+,-	PGLS,NXNL1	-866,-51522
chr4:1165840-1166119	chr4	+	1166079	1166165	True	NR_033339,NM_012445,NM_001128325	chr4,chr4,chr4	+,-,-	C4orf42,SPON2,SPON2	77062,542,884
chr12:124774673-124775432	chr12	+	124774682	124775248	True	NM_001077261,NM_181709	chr12,chr12	-,+	NCOR2,FAM101A	276812,-1023
chr12:31228893-31229221	chr12	+	31228905	31229207	True	NM_004399,NM_001135811,NM_030653,NM_152438	chr12,chr12,chr12,chr12	+,-,+,+	DDX11,FAM60A,DDX11,DDX11	-2177,249964,-2177,-2177
chr12:31228893-31229221	chr12	-	9598393	9598695	False	NR_033399,NR_024374	chr12,chr12	-,+	DDX12,LOC642846	2123,-162191
chr12:31228893-31229221	chr12	+	9438374	9438676	False	NR_036263,NR_024374	chr12,chr12	-,+	MIR1244-3,LOC642846	-46227,-2172
chr1:53661764-53662383	chr1	+	53661782	53662229	True	NM_017887,NM_000098	chr1,chr1	-,+	C1orf123,CPT2	24111,11
chr9:70918817-70920569	chr2	+	114259164	114259500	False	NM_012184,NR_024005	chr2,chr2	+,-	FOXD4L1,DDX11L2	-2555,99705
chr9:70918817-70920569	chr9	+	70919099	70920584	True	NR_015423,NM_199135	chr9,chr9	-,+	LOC572558,FOXD4L3	52225,-1367
chr9:70918817-70920569	chr9	-	115437	115771	False	NM_203447,NM_207305	chr9,chr9	+,-	DOCK8,FOXD4	99093,2697
chr9:70918817-70920569	chr9	-	69199187	69200380	False	NM_001085476,NM_001098805	chr9,chr9	-,+	FOXD4L6,ANKRD20A4	1874,181600
chrX:108778361-108778995	chrX	+	108778564	108779038	True	NM_018698,NM_001522	chrX,chrX	+,-	NXT2,GUCY2F	-29,-53279
chr12:81111286-81112697	chr12	+	81111335	81112705	True	NM_002469,NM_005593,NR_030348	chr12,chr12,chr12	+,+,-	MYF6,MYF5,MIR617	-9979,-679,113753
chrX:115592919-115594240	chrX	+	115592928	115594194	True	NM_007231,NM_001017978	chrX,chrX	+,-	SLC6A14,CXorf61	-25232,-7
chr17:46799484-46799720	chr17	+	46799488	46799742	True	NR_036150,NR_024103,NM_032391,NM_006361	chr17,chr17,chr17,chr17	-,+,-,-	MIR3185,NCRNA00253,PRAC,HOXB13	2145,799,190,6419
chr11:74440062-74441687	chr11	+	74440073	74441575	True	NM_015424,NM_001098638	chr11,chr11	-,+	CHRDL2,RNF169	661,18337
chr15:23932624-23933558	chr15	+	23932737	23933517	True	NM_005664,NM_002487	chr15,chr15	+,-	MKRN3,NDN	-122336,-287
chr6:26235460-26236985	chr6	+	26235487	26236439	True	NM_005320,NM_003540	chr6,chr6	-,+	HIST1H1D,HIST1H4F	-271,4214
chr10:105619380-105619674	chr10	+	105619401	105619721	True	NM_014631,NM_014720	chr10,chr10	-,+	SH3PXD2A,SLK	-4237,107748
chr1:48246484-48246744	chr1	+	48246501	48246729	True	NM_001194986,NM_004474	chr1,chr1	-,+	LOC388630,FOXD2	215883,-344863
chr15:43666143-43667191	chr15	+	43666146	43667002	True	NM_014444,NM_152455	chr15,chr15	+,-	TUBGCP4,ZSCAN29	-2884,-3888
chr12:121405481-121405694	chr12	+	121405501	121405677	True	NR_024345,NM_000545	chr12,chr12	-,+	NCRNA00262,HNF1A	4468,10871
chr4:46377506-46377871	chr4	+	46377520	46377911	True	NM_001114175,NM_000812	chr4,chr4	-,+	GABRA2,GABRB1	13538,655383
chr19:38747290-38747603	chr19	+	38747343	38747405	True	NM_021102,NM_001166103,NM_033256	chr19,chr19,chr19	+,+,-	SPINT2,SPINT2,PPP1R14A	7692,7692,-171
chr16:67281511-67281720	chr16	+	67281529	67281755	True	NM_013241,NM_004594	chr16,chr16	-,+	FHOD1,SLC9A5	-104,1099
chr17:16344091-16344572	chr17	+	16344290	16344623	True	NR_027178,NR_027176,NR_027166,NR_027167,NR_027164,NR_027165,NR_003043,NR_027163,NR_027160,NR_027161,NR_027168,NR_027169,NR_027667,NR_027158,NR_027162,NR_003054,NR_027175,NR_027174,NR_027177,NR_002744,NR_027171,NR_027170,NR_027173,NR_027172,NR_027179,NR_027159,NM_001113567	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,-	NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,SNORD49B,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,SNORD65,NCRNA00188,NCRNA00188,NCRNA00188,SNORD49A,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,C17orf76	-2051,-2051,-2051,-2051,-2051,-2051,-1529,-2051,-2051,-2051,-2051,-2051,-2051,-2051,-2051,63,-2051,-2051,-2051,-1002,-2051,-2051,-2051,-2051,-2051,-2051,50914
chr8:103566968-103567505	chr8	+	103567248	103567486	True	NM_024410,NM_001032282	chr8,chr8	+,-	ODF1,KLF10	-3451,98732
chr12:57854075-57854660	chr12	+	57854207	57854517	True	NM_001167609,NM_001080156,NM_031479,NM_005269,NM_001160045	chr12,chr12,chr12,chr12,chr12	+,-,+,+,+	GLI1,ARHGAP9,INHBE,GLI1,GLI1	-324,17261,-5162,-324,-340
chr10:116290451-116291039	chr10	+	116290585	116291075	True	NM_020940,NM_006720	chr10,chr10	+,-	FAM160B1,ABLIM1	290427,-3900
chr5:140098494-140098737	chr5	+	140098499	140098715	True	NR_026705,NR_026704,NM_002109,NR_026703	chr5,chr5,chr5,chr5	+,+,-,+	VTRNA1-3,VTRNA1-2,HARS,VTRNA1-1	7028,-39,-27528,-7689
chr7:50341208-50342439	chr7	+	50341612	50342358	True	NM_001042762,NM_006060	chr7,chr7	-,+	FIGNL1,IKZF1	175780,2019
chr2:8965222-8965935	chr2	+	8965519	8965947	True	NM_020738,NM_002166	chr2,chr2	-,+	KIDINS220,ID2	11858,-143464
chr2:121102454-121102676	chr2	+	121102470	121102664	True	NM_002193,NR_027181	chr2,chr2	+,-	INHBB,LOC84931	1054,121311
chr11:64863136-64863537	chr11	+	64863142	64863408	True	NM_013265,NM_080668	chr11,chr11	+,-	C11orf2,CDCA5	274,-11527
chr4:25521030-25522574	chr4	+	25521296	25522420	True	NM_015187,NM_001177998	chr4,chr4	-,+	SEL1L3,SLC34A2	342240,135014
chr16:22218922-22219548	chr16	+	22218974	22219562	True	NM_001802,NM_013302	chr16,chr16	-,+	CDR2,EEF2K	166426,-1436
chr1:219664946-219666847	chr1	+	219665049	219666560	True	NM_138794,NM_018713	chr1,chr1	+,-	LYPLAL1,SLC30A10	-317908,435492
chr1:28288567-28289824	chr1	+	28288583	28289528	True	NM_002946,NM_018053	chr1,chr1	-,+	RPA2,XKR8	-47347,-2130
chr3:122296848-122298545	chr3	+	122297134	122298413	True	NM_031458,NM_001113523	chr3,chr3	-,+	PARP9,PARP15	-13611,-744
chr20:43155229-43156108	chr20	+	43155569	43156157	True	NM_198941,NM_007066,NM_006811,NM_181805,NM_181804	chr20,chr20,chr20,chr20,chr20	-,+,-,+,+	SERINC3,PKIG,SERINC3,PKIG,PKIG	-4843,4278,-4843,4278,4278
chr19:37065569-37066615	chr19	+	37065719	37066667	True	NM_020951,NM_032825	chr19,chr19	-,+	ZNF529,ZNF382	-1522,29553
chr3:58653591-58654219	chr3	+	58653751	58654239	True	NM_138805,NM_153331	chr3,chr3	-,+	FAM3D,KCTD6	-1190,-169710
chr18:3263080-3264192	chr18	+	3263081	3264187	True	NM_001144945,NM_001144944,NM_033546,NM_019856	chr18,chr18,chr18,chr18	+,+,+,-	MYL12B,MYL12B,MYL12B,MYOM1	-415,-521,-1021,-42975
chr12:67461735-67462754	chr12	+	67461884	67462706	True	NM_021150,NM_018448	chr12,chr12	-,+	GRIP1,CAND1	-388959,200354
chr10:95721666-95723384	chr10	+	95721812	95723194	True	NR_002319,NM_016341	chr10,chr10	-,+	PIPSL,PLCE1	-140,30551
chr15:78190151-78190735	chr15	+	78190250	78190748	True	NM_001101404,NR_027024	chr15,chr15	+,-	SH2D7,LOC645752	194178,28490
chr1:116514282-116515752	chr1	+	116514712	116515719	True	NM_018420,NM_005599	chr1,chr1	+,-	SLC22A15,NHLH2	3399,-130965
chr1:16343754-16344171	chr1	+	16343815	16344205	True	NM_014424,NM_004070,NM_001042704	chr1,chr1,chr1	-,+,+	HSPB7,CLCNKA,CLCNKA	1130,4280,4280
chr12:13043127-13044093	chr12	+	13043131	13043785	True	NM_018654,NM_003979	chr12,chr12	-,+	GPRC5D,GPRC5A	59583,170
chr8:28174894-28175348	chr8	+	28174964	28175365	True	NM_018660,NM_006228	chr8,chr8	-,+	ZNF395,PNOC	68662,-366
chr17:9808822-9809171	chr17	+	9808907	9809217	True	NM_004246,NM_002903	chr17,chr17	+,-	GLP2R,RCVRN	-79577,-223
chr20:46615706-46616186	chr20	+	46615756	46615957	True	NR_026958,NM_198596	chr20,chr20	+,-	LOC284749,SULF2	372696,-200396
chr9:116858632-116859683	chr9	+	116858656	116859622	True	NM_138424,NM_032888	chr9,chr9	-,+	KIF12,COL27A1	1765,58608
chr13:47067284-47067704	chr13	+	47067295	47067599	True	NM_001164211,NM_025113	chr13,chr13	+,-	LRCH1,C13orf18	59696,-105660
chr12:108079456-108079827	chr12	+	108079486	108079686	True	NM_012406,NM_007062	chr12,chr12	-,+	PRDM4,PWP1	75278,43
chr17:47751362-47753101	chr17	+	47751943	47753038	True	NM_001007226,NM_001007227,NM_001007230,NM_003563,NM_001007228,NM_001007229,NM_007225	chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,-,+	SPOP,SPOP,SPOP,SPOP,SPOP,SPOP,NXPH3	2548,2548,2548,2548,2548,2548,-98707
chrX:118110475-118110706	chrX	+	118110506	118110732	True	NM_001031855,NM_024778,NM_020721	chrX,chrX,chrX	+,+,-	LONRF3,LONRF3,KIAA1210	-1844,-1844,173860
chr3:155521685-155522637	chr3	+	155522275	155522637	True	NM_003875,NM_173657	chr3,chr3	+,-	GMPS,C3orf33	65687,1468
chr14:101031108-101031334	chr14	+	101031252	101031354	True	NR_024096,NM_001159531,NM_020836	chr14,chr14,chr14	+,-,-	C14orf70,BEGAIN,BEGAIN	92250,3103,4827
chr11:84634186-84634579	chr11	+	84634233	84634449	True	NM_001364,NM_001193537	chr11,chr11	-,+	DLG2,TMEM126B	76,705172
chr1:43764264-43765395	chr1	+	43764417	43765279	True	NM_005424,NM_001164829	chr1,chr1	+,-	TIE1,C1orf210	1384,-13129
chr11:46409506-46409800	chr11	+	46409598	46409828	True	NM_000741,NM_002391,NM_001012334,NM_001012333	chr11,chr11,chr11,chr11	-,+,+,+	CHRM4,MDK,MDK,MDK	-1491,-6430,-7031,-6346
chr8:8003208-8003696	chr8	+	8003226	8003302	True	NR_031689,NR_024362	chr8,chr8	-,+	MIR548I3,FLJ10661	-56615,82789
chr8:8003208-8003696	chr8	-	12377392	12377468	False	NR_026789,NM_001137610	chr8,chr8	+,-	FAM66A,FAM86B2	-157915,-83540
chrY:538721-540431	chrY	+	538726	540420	True	NM_006883,NM_000451,NM_013239	chrY,chrY,chrY	+,+,-	SHOX,SHOX,PPP2R3B	-3698,-3698,-241036
chrY:538721-540431	chrX	+	588726	590420	False	NM_006883,NM_000451,NM_013239	chrX,chrX,chrX	+,+,-	SHOX,SHOX,PPP2R3B	-3698,-3698,-241036
chr3:187461729-187462511	chr3	+	187461805	187462456	True	NM_001134738,NM_001130845,NM_001706,NR_034062	chr3,chr3,chr3,chr3	-,-,-,+	BCL6,BCL6,BCL6,LOC100131635	-9110,-7520,1107,-41702
chr11:122715816-122716840	chr11	+	122715852	122716858	True	NM_019604,NM_001098169	chr11,chr11	+,-	CRTAM,BSX	-6648,135571
chr1:50488817-50489238	chr1	+	50488869	50489229	True	NM_032785,NM_001144777	chr1,chr1	-,+	AGBL4,ELAVL4	447,24456
chr13:111365465-111365897	chr13	+	111365498	111365818	True	NM_198218,NM_198219,NM_005537,NM_024537,NM_198217	chr13,chr13,chr13,chr13,chr13	+,+,+,-,+	ING1,ING1,ING1,CARS2,ING1	25,40,1540,-7018,-466
chr17:2414822-2415397	chr17	+	2414834	2415376	True	NM_000430,NM_024086	chr17,chr17	+,-	PAFAH1B1,METTL16	81546,12
chr7:45025618-45025840	chr7	+	45025625	45025783	True	NR_002952,NR_003697,NM_033054,NR_030770	chr7,chr7,chr7,chr7	-,-,-,+	SNORA9,C7orf40,MYO1G,CCM2	-516,526,-6921,13561
chr14:24108180-24108417	chr14	+	24108245	24108423	True	NM_032452,NM_005794,NM_182908	chr14,chr14,chr14	-,+,+	JPH4,DHRS2,DHRS2	-60236,-2723,-2723
chr4:57975791-57976162	chr4	+	57975790	57976186	True	NR_034081,NM_001553	chr4,chr4	+,-	LOC255130,IGFBP7	73,403
chr9:136224661-136225149	chr9	+	136224749	136225143	True	NM_133640,NM_000972,NM_181491,NR_000017,NR_002447,NM_003172,NM_017503,NR_002448,NR_000016	chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,+,-,+,+,-,+,+,+	MED22,RPL7A,MED22,SNORD36B,SNORD24,SURF1,SURF2,SNORD36A,SNORD36C	-9777,-9731,-9777,-7851,-8549,-1388,-1379,-7489,-7099
chr4:76916954-76917528	chr4	+	76917085	76917576	True	NM_018115,NM_001130017	chr4,chr4	-,+	SDAD1,ART3	-4972,14760
chr8:124666374-124668121	chr8	+	124666562	124667921	True	NM_001081675,NM_144963	chr8,chr8	-,+	KLHL38,FAM91A1	-1372,112960
chr5:132085242-132086327	chr5	+	132085345	132086153	True	NM_007054,NM_001039780	chr5,chr5	-,+	KIF3A,CCNI2	-12080,-2259
chr9:125391250-125391777	chr9	+	125391309	125391775	True	NM_001004450,NM_012364	chr9,chr9	-,+	OR1B1,OR1Q1	89,-14343
chr22:31883698-31885059	chr22	+	31883820	31885029	True	NM_019843,NM_001007467,NM_001164502,NM_001164501,NM_014775	chr22,chr22,chr22,chr22,chr22	-,+,-,-,+	EIF4ENIF1,SFI1,EIF4ENIF1,EIF4ENIF1,SFI1	902,7231,902,575,7231
chr17:16472477-16472691	chr17	+	16472484	16472690	True	NM_014695,NM_020653	chr17,chr17	+,-	CCDC144A,ZNF287	120948,-2
chr13:53227368-53229200	chr13	+	53227602	53229139	True	NM_006704,NM_001011705,NM_001130912	chr13,chr13,chr13	+,-,+	SUGT1,LECT1,SUGT1	-824,84864,-824
chr16:19076140-19077548	chr16	+	19076718	19077336	True	NM_015092,NM_001190983,NM_016138	chr16,chr16,chr16	-,+,+	SMG1,COQ7,COQ7	-138992,1902,1580
chr8:145596185-145596390	chr8	+	145596235	145596327	True	NM_024555,NM_174922	chr8,chr8	-,+	FBXL6,ADCK5	-14103,1403
chr11:46958948-46959161	chr11	+	46958947	46959048	True	NM_024113,NM_001003677,NM_001003676,NM_001003678,NM_002334	chr11,chr11,chr11,chr11,chr11	+,+,+,+,-	C11orf49,C11orf49,C11orf49,C11orf49,LRP4	-747,-747,-747,-747,-18774
chr19:36644898-36645589	chr19	+	36645237	36645416	True	NM_001749,NM_001864	chr19,chr19	+,-	CAPNS1,COX7A1	-14380,-1466
chr5:135511998-135513045	chr5	+	135512167	135513032	True	NR_024418,NM_001001419	chr5,chr5	-,+	LOC389332,SMAD5	15877,-43694
chr1:52456649-52457364	chr1	+	52456822	52457236	True	NM_002867,NM_001136497	chr1,chr1	-,+	RAB3B,BTF3L4	-386,64620
chr12:6558597-6558870	chr12	+	6558614	6558707	True	NM_001242,NM_018009,NR_015382	chr12,chr12,chr12	+,+,-	CD27,TAPBPL,LOC678655	-4627,2469,2035
chr20:29520997-29522292	chr20	+	29521088	29522328	True	NM_001037731,NR_003579	chr20,chr20	-,+	DEFB116,FRG1B	374110,89550
chr19:47104962-47105199	chr19	+	47104963	47105145	True	NM_001205281,NM_005184	chr19,chr19	-,+	LOC100506012,CALM3	-506,-502
chr5:1343781-1344137	chr5	+	1343816	1344138	True	NM_182632,NM_030782	chr5,chr5	+,-	SLC6A18,CLPTM1L	-118397,914
chr2:137086105-137087368	chr2	+	137086109	137087346	True	NM_003467,NM_014607	chr2,chr2	-,+	CXCR4,UBXN4	-210384,-586971
chrX:118828245-118828460	chrX	+	118828264	118828404	True	NM_145802,NM_145799,NM_145800,NM_001105576,NM_015129	chrX,chrX,chrX,chrX,chrX	-,-,-,+,-	SEPT6,SEPT6,SEPT6,ANKRD58,SEPT6	-931,-931,-931,64171,-931
chr17:8063952-8064767	chr17	+	8064350	8064701	True	NM_002616,NR_037447,NM_014232	chr17,chr17,chr17	-,+,-	PER1,MIR3676,VAMP2	-8597,25791,1655
chr15:40452876-40453284	chr15	+	40452909	40453325	True	NM_001003940,NM_001211	chr15,chr15	-,+	BMF,BUB1B	-51834,50
chr22:35864783-35866084	chr22	+	35865270	35865996	True	NM_005368,NM_006739	chr22,chr22	-,+	MB,MCM5	147438,-69205
chr7:20702025-20702783	chr7	+	20702025	20702789	True	NM_178559,NM_182700	chr7,chr7	+,-	ABCB5,SP8	-15114,123769
chr11:46299865-46300178	chr11	+	46299869	46300135	True	NM_000741,NM_052854	chr11,chr11	-,+	CHRM4,CREB3L1	108022,-692
chr8:86350967-86351193	chr8	+	86351100	86351242	True	NM_005181,NM_001738	chr8,chr8	+,-	CA3,CA1	-95,-60758
chr17:7330326-7330656	chr17	+	7330347	7330549	True	NM_152766,NM_199339,NM_175734,NM_178518	chr17,chr17,chr17,chr17	-,+,+,+	C17orf61,SPEM1,C17orf74,TMEM102	-22897,-6719,-1463,8212
chr17:36614258-36614513	chr17	+	36614275	36614499	True	NM_001004334,NM_001199417	chr17,chr17	-,+	GPR179,ARHGAP23	-114582,-29606
chr16:74331658-74332345	chr16	+	74331728	74332378	True	NR_026950,NM_002811	chr16,chr16	-,+	LOC283922,PSMD7	69825,-1106
chr15:68873101-68874490	chr15	+	68873113	68874423	True	NM_006091,NM_001004439	chr15,chr15	+,-	CORO2B,ITGA11	-1591,-148621
chr7:45018564-45018847	chr7	+	45018567	45018724	True	NR_002952,NR_003697,NM_033054,NR_030770	chr7,chr7,chr7,chr7	-,-,-,+	SNORA9,C7orf40,MYO1G,CCM2	6435,7585,30,20620
chr2:71209227-71209558	chr2	+	71209351	71209553	True	NM_144582,NM_024933,NM_001115116	chr2,chr2,chr2	-,+,+	TEX261,ANKRD53,ANKRD53	12498,-3827,-3827
chr18:47020072-47020330	chr18	+	47020171	47020315	True	NM_001199356,NM_001199340,NM_001199343,NM_001199342,NM_001199345,NM_001199344,NR_031720,NM_001035006,NM_001035005,NM_001199346,NM_000985,NM_001199355,NR_002571,NR_002572,NR_002573,NR_003701,NM_001199341	chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18	-,-,-,-,-,-,+,-,-,-,-,-,-,-,-,-,-	RPL17-C18ORF32,RPL17,RPL17,RPL17,RPL17,RPL17,MIR1539,RPL17,C18orf32,C18orf32,RPL17,RPL17-C18ORF32,SNORD58A,SNORD58B,U58,SNORD58C,RPL17	-1236,-1236,-1337,-1337,-1236,-1337,-6488,-1236,-6527,-6527,-1236,-2217,-2454,-2072,-4493,-4477,-1337
chr5:149537914-149539151	chr5	+	149538070	149538924	True	NM_001804,NM_002609	chr5,chr5	+,-	CDX1,PDGFRB	7419,-2648
chr5:138089757-138090487	chr5	+	138089763	138090446	True	NM_015564,NM_001903	chr5,chr5	-,+	LRRTM2,CTNNA1	120669,-707
chr21:45523323-45523985	chr21	+	45523377	45523924	True	NM_005049,NM_015259	chr21,chr21	+,-	PWP2,ICOSLG	3283,136963
chr19:1489425-1489662	chr19	+	1489425	1489711	True	NM_138393,NM_017573	chr19,chr19	+,-	REEP6,PCSK4	1453,746
chr9:95079387-95079764	chr9	+	95079575	95079803	True	NR_024020,NM_001012267,NM_017948	chr9,chr9,chr9	-,+,-	NOL8,CENPP,NOL8	8123,7937,8123
chr2:42725562-42726465	chr2	+	42725596	42726293	True	NM_020744,NM_172344,NM_133329	chr2,chr2,chr2	+,-,-	MTA3,KCNG3,KCNG3	69377,-4359,-4359
chr19:4559007-4559564	chr19	+	4559216	4559496	True	NM_152362,NM_032108	chr19,chr19	+,-	TNFAIP8L1,SEMA6B	80030,325
chr16:47006518-47006826	chr16	+	47006523	47006804	True	NM_005880,NM_001142466	chr16,chr16	-,+	DNAJA2,GPT2	872,-87472
chr1:154176270-154177653	chr1	+	154176592	154176915	True	NM_001010979,NM_001127320	chr1,chr1	-,+	C1orf189,UBAP2L	1951,15739
chr1:115120533-115122409	chr1	+	115121046	115122208	True	NM_003176,NM_005872	chr1,chr1	+,-	SYCP1,BCAS2	275246,2113
chr9:39286684-39288088	chr9	+	39286695	39287120	True	NM_033655,NM_001085452	chr9,chr9	-,+	CNTNAP3,FAM75A1	1239,68578
chr9:39286684-39288088	chr9	-	65578359	65578409	False	NR_024496,NM_015667	chr9,chr9	+,-	LOC442421,FAM75A7	915859,-68749
chr9:39286684-39288088	chr9	+	39815945	39815995	False	NR_003528,NM_001085452	chr9,chr9	-,+	LOC653501,FAM75A1	-351419,68979
chr9:39286684-39288088	chr9	+	41431951	41432001	False	NM_015667	chr9	+	FAM75A7	68677
chr10:104474835-104475110	chr10	+	104475096	104475158	True	NM_178858,NM_004311	chr10,chr10	+,-	SFXN2,ARL3	-849,-906
chr8:71573171-71575081	chr8	+	71573561	71574885	True	NM_016027,NM_001011720	chr8,chr8	-,+	LACTB2,XKR9	6612,6714
chr20:35490590-35490957	chr20	+	35490590	35490890	True	NM_080628,NM_080627,NM_199181	chr20,chr20,chr20	+,-,-	C20orf118,KIAA0889,KIAA0889	13679,1247,-2314
chr1:46017165-46018719	chr1	+	46017216	46018510	True	NM_001202414,NM_153326,NM_006066,NM_001202431,NM_001202413	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	AKR1A1,AKR1A1,AKR1A1,PRDX1,AKR1A1	-820,-820,-820,-28654,-820
chr13:95363023-95363369	chr13	+	95363079	95363375	True	NM_180989,NM_007084	chr13,chr13	+,-	GPR180,SOX21	-109029,1064
chr11:4838092-4839997	chr11	+	4838205	4839949	True	NM_001004753,NM_001005177	chr11,chr11	+,-	OR51F2,OR52R1	2666,-12595
chr2:66664958-66666407	chr2	+	66665080	66666319	True	NM_181784,NM_002398	chr2,chr2	-,+	SPRED2,MEIS1	-1005424,-2599
chr4:117519302-117519519	chr4	+	117519353	117519537	True	NM_152402,NR_031737	chr4,chr4	-,+	TRAM1L1,MIR1973	487249,-298523
chr19:36001429-36001762	chr19	+	36001571	36001725	True	NM_001035516,NM_001190348,NM_001126059,NM_001126058,NM_001126057,NM_001190347,NM_001190349,NM_001126056,NR_033746,NM_014364,NM_033317	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,-,-,+,-	DMKN,DMKN,DMKN,DMKN,DMKN,DMKN,DMKN,DMKN,DMKN,GAPDHS,DMKN	-8758,2885,-180,2885,2885,2885,2885,2885,-159,22588,2885
chr17:45911614-45911829	chr17	+	45911614	45911820	True	NM_138355,NR_037575,NM_148887,NM_001145023,NM_033413,NM_145255	chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,+,-	SCRN2,MRPL10,MRPL10,SCRN2,LRRC46,MRPL10	6929,-2707,-2707,6929,-2673,-2707
chr11:6701528-6702504	chr11	+	6701665	6702449	True	NM_001014795,NM_022061	chr11,chr11	+,-	ILK,MRPL17	-76510,2233
chr11:66513572-66513779	chr11	+	66513576	66513694	True	NM_024650,NM_006946	chr11,chr11	+,-	C11orf80,SPTBN2	-1420,-24706
chr2:88927452-88927714	chr2	+	88927460	88927674	True	NM_144563,NM_004836	chr2,chr2	+,-	RPIA,EIF2AK3	63501,-366
chr1:147400017-147400538	chr1	+	147400023	147400387	True	NR_003377,NM_016334	chr1,chr1	-,+	PDZK1P1,GPR89B	83994,118
chr1:147400017-147400538	chr1	-	145827191	145827555	False	NM_001097612,NM_001097613,NM_001097616,NR_036541	chr1,chr1,chr1,chr1	-,-,+,-	GPR89A,GPR89A,GPR89C,GPR89A	-88,-88,56312,-88
chr1:24648591-24648849	chr1	+	24648816	24648898	True	NM_198173,NM_021180,NM_001195010,NM_001199013,NM_198174	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	GRHL3,GRHL3,GRHL3,C1orf201,GRHL3	-3055,631,-2811,91414,-3055
chr1:155192081-155192660	chr1	+	155192179	155192495	True	NR_002188,NM_198883	chr1,chr1	-,+	GBAP1,MTX1	4880,-13754
chr2:128153483-128153752	chr2	+	128153698	128153760	True	NM_000312,NM_006609	chr2,chr2	+,-	PROC,MAP3K2	22235,-52928
chr19:50431628-50432217	chr19	+	50431792	50431949	True	NM_001193357,NM_016553,NM_012068,NM_012346,NM_001193646,NM_153718,NM_153719,NM_172374	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,+,-,+,-,-,-	NUP62,NUP62,ATF5,NUP62,ATF5,NUP62,NUP62,IL4I1	901,1090,9,875,450,890,890,864
chr10:128595045-128595325	chr10	+	128595099	128595311	True	NM_001004298,NM_001380	chr10,chr10	-,+	C10orf90,DOCK1	-385089,-1127
chr13:54863680-54865449	chr13	+	54863680	54864470	True	NR_031628,NM_006418	chr13,chr13	-,+	MIR1297,OLFM4	21763,-1260860
chr6:82638281-82639832	chr6	+	82638296	82639771	True	NM_006670,NM_017633	chr6,chr6	+,-	TPBG,FAM46A	433151,-175868
chrX:2845104-2845366	chrX	+	2845149	2845276	True	NM_009589,NM_001011719,NM_001669	chrX,chrX,chrX	-,+,-	ARSD,ARSH,ARSD	2169,79377,2169
chr8:30600234-30600831	chr8	+	30600244	30600586	True	NM_005671,NM_001195104	chr8,chr8	+,-	UBXN8,GSR	1103,-14758
chr19:50325374-50326112	chr19	+	50325833	50325900	True	NM_025129,NR_033269,NM_001171937,NM_030973	chr19,chr19,chr19,chr19	-,-,-,+	FUZ,FUZ,FUZ,MED25	-9266,-9266,-9266,-4357
chr13:19920569-19921839	chr13	+	19920578	19921780	True	NR_034026,NR_027248	chr13,chr13	+,-	LOC100287114,ANKRD26P3	-1440,-1465
chr12:9067831-9068347	chr12	+	9067894	9068382	True	NM_004426,NM_002355	chr12,chr12	+,-	PHC1,M6PR	-629,33920
chr10:93393556-93394193	chr10	+	93393660	93394240	True	NM_025235,NM_005398	chr10,chr10	+,-	TNKS2,PPP1R3C	163910,-802
chr20:3749398-3750212	chr20	+	3749446	3750112	True	NM_001039140,NM_004358	chr20,chr20	-,+	C20orf27,CDC25B	-994,26288
chr8:145671294-145671524	chr8	+	145671478	145671564	True	NM_145754,NM_013432	chr8,chr8	+,-	KIFC2,TONSL	20173,-1666
chr1:150124168-150125470	chr1	+	150124353	150125382	True	NM_016274,NM_001136479	chr1,chr1	+,-	PLEKHO1,ANP32E	-2242,81694
chr1:11107534-11108456	chr1	+	11107801	11108233	True	NM_006610,NM_007375,NM_139208	chr1,chr1,chr1	-,+,-	MASP2,TARDBP,MASP2	-505,-35173,-505
chr3:14716873-14717288	chr3	+	14716924	14717168	True	NM_001184957,NM_001080423,NM_001184958,NM_032137	chr3,chr3,chr3,chr3	+,-,+,+	C3orf20,GRIP2,C3orf20,C3orf20	-369,-133336,-369,-369
chr19:240030-240803	chr19	+	240494	240569	True	NM_001005240,NR_028324	chr19,chr19	+,-	OR4F17,FLJ45445	-129866,-38285
chr17:41001164-41002329	chr17	+	41001504	41002226	True	NM_001158,NM_003734,NM_009590,NM_003766	chr17,chr17,chr17,chr17	+,+,+,-	AOC2,AOC3,AOC2,BECN1	-4946,974,-4946,-25194
chr20:62589384-62590684	chr20	+	62589494	62590517	True	NM_017859,NM_001193379,NR_027287	chr20,chr20,chr20	-,-,+	UCKL1,UCKL1,UCKL1-AS1	-1694,-6967,-4808
chr6:149862867-149863412	chr6	+	149863243	149863417	True	NM_139126,NM_138785	chr6,chr6	-,+	PPIL4,C6orf72	3806,24110
chr17:33823543-33824332	chr17	+	33823657	33823989	True	NR_003037,NM_001195790	chr17,chr17	+,-	SNORD7,SLFN12L	76686,-8899
chr4:79860700-79862264	chr4	+	79860749	79862130	True	NM_198892,NM_001040202	chr4,chr4	+,-	BMP2K,PAQR3	-163268,-167
chr19:54313570-54314369	chr19	+	54313575	54314179	True	NM_033297,NR_029866	chr19,chr19	-,+	NLRP12,MIR373	-1616,-21667
chr7:106807258-106808903	chr7	+	106807329	106808819	True	NM_012257,NM_006348	chr7,chr7	+,-	HBP1,COG5	640,396190
chr16:757840-758873	chr16	+	757944	758878	True	NM_153350,NM_024042	chr16,chr16	-,+	FBXL16,METRN	-2119,6294
chr7:89746244-89747946	chr7	+	89746741	89747914	True	NR_003551,NM_152706	chr7,chr7	+,-	DPY19L2P4,C7orf62	799,-1321710
chr3:48232120-48233966	chr3	+	48232359	48233598	True	NM_001789,NM_004345,NM_201567	chr3,chr3,chr3	-,+,-	CDC25A,CAMP,CDC25A	-2558,31263,-2558
chr7:57080232-57080709	chr7	+	57080421	57080523	True	NR_036270,NR_036102	chr7,chr7	-,+	MIR4283-2,MIR3147	-56850,392207
chr7:57080232-57080709	chr7	-	63024433	63024535	False	NR_028349,NR_036246	chr7,chr7	-,+	LOC100287834,MIR4283-1	-165014,56932
chr3:37443951-37445828	chr3	+	37443956	37445854	True	NM_178339,NM_017724,NM_178342	chr3,chr3,chr3	+,-,+	C3orf35,LRRFIP2,C3orf35	-3040,-226105,-3040
chr16:30198728-30199276	chr16	+	30198761	30199303	True	NR_037608,NR_037609,NM_001014999,NM_007074,NM_001015000,NM_024044,NM_001031827,NR_002454,NM_001039182,NM_178044,NM_001193333	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,+,-,+,-,+,+	SLX1A-SULT1A3,SLX1B-SULT1A4,SLX1A,CORO1A,SLX1A,SLX1B,BOLA2,LOC606724,BOLA2B,SLX1B,CORO1A	6450,6450,5860,-4081,5860,5860,6374,701,6374,5860,-4081
chr17:66194612-66195064	chr17	+	66194616	66195080	True	NR_027283,NM_001174166	chr17,chr17	+,-	LOC440461,SLC16A6	26,92375
chr11:10770065-10770363	chr11	+	10770064	10770290	True	NM_014633,NR_004403	chr11,chr11	+,-	CTR9,SNORD97	2520,52915
chr17:61950134-61950691	chr17	+	61950188	61950638	True	NM_020991,NM_022645,NM_022644,NM_022557,NM_022556,NR_002947,NM_002059,NM_022558	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,+,-,-	CSH2,CSH2,CSH2,GH2,GH2,TCAM1P,GH2,GH2	501,501,501,8635,8635,-15863,8635,8635
chr17:61950134-61950691	chr17	+	61973084	61973282	False	NM_022641,NM_022640,NR_002947,NM_001317	chr17,chr17,chr17,chr17	-,-,+,-	CSH1,CSH1,TCAM1P,CSH1	789,789,-38759,789
chr1:228784430-228785405	chr1	+	228784731	228785434	True	NR_002834,NM_033445,NR_037962	chr1,chr1,chr1	+,-,+	DUSP5P,HIST3H2A,RHOU	-4125,-139171,-4388
chr16:67447788-67448713	chr16	+	67447862	67448735	True	NM_013304,NM_000196	chr16,chr16	-,+	ZDHHC1,HSD11B2	1654,16300
chrX:47932228-47933821	chrX	+	47932427	47933417	True	NM_001190255,NM_001037735,NR_028366,NR_033730	chrX,chrX,chrX,chrX	-,-,+,-	ZNF630,ZNF630,SSX6,ZNF630	-1426,-1919,33949,-1402
chr9:20670736-20672540	chr9	+	20670816	20672381	True	NM_004529,NM_017794	chr9,chr9	-,+	MLLT3,KIAA1797	-48302,-12559
chr22:24649298-24649569	chr22	+	24649297	24649465	True	NM_001099782,NM_001099781,NM_004121,NR_003714	chr22,chr22,chr22,chr22	-,-,-,+	GGT5,GGT5,GGT5,POM121L9P	-8187,-8187,-8187,-1759
chr22:24649298-24649569	chr22	-	25053351	25053640	False	NR_024593,NR_024494	chr22,chr22	-,+	POM121L10P,BCRP3	1763,-24759
chr9:115872979-115873515	chr9	+	115873054	115873450	True	NR_024376,NR_024366	chr9,chr9	-,+	NCRNA00256B,NCRNA00256A	557,1725
chr9:115872979-115873515	chr9	-	115875682	115876078	False	NR_024376,NR_024366	chr9,chr9	-,+	NCRNA00256B,NCRNA00256A	-1725,-557
chr15:74423908-74424188	chr15	+	74423935	74424115	True	NM_001130137,NM_001130136,NM_001130138,NR_027073,NM_020851	chr15,chr15,chr15,chr15,chr15	+,+,+,-,+	ISLR2,ISLR2,ISLR2,LOC283731,ISLR2	-1990,-2271,-1396,-2316,-1243
chr3:194171224-194173103	chr3	+	194171252	194172750	True	NR_033929,NM_024524	chr3,chr3	+,-	FLJ34208,ATP13A3	35118,16277
chr3:8805401-8806495	chr3	+	8805405	8806337	True	NM_001234,NM_000916	chr3,chr3	+,-	CAV3,OXTR	-29960,5013
chr22:25377338-25378784	chr22	+	25377385	25378449	True	NM_001145206,NM_001001663	chr22,chr22	+,-	KIAA1671,TMEM211	45491,-42071
chr20:18121623-18122248	chr20	+	18121897	18122203	True	NR_028402,NM_020536,NM_001164811,NM_021220	chr20,chr20,chr20,chr20	+,+,+,-	CSRP2BP,CSRP2BP,PET117,OVOL2	3539,664,-3449,-83376
chr11:66826868-66827158	chr11	+	66827055	66827197	True	NM_014578,NM_001040716	chr11,chr11	+,-	RHOD,PC	-2820,-101208
chr22:32812757-32814626	chr22	+	32812802	32814403	True	NM_014306,NM_012179	chr22,chr22	-,+	C22orf28,FBXO7	-4528,56303
chr21:42543121-42543380	chr21	+	42543147	42543373	True	NM_182832,NM_138991,NR_036167,NM_012105,NM_138992	chr21,chr21,chr21,chr21,chr21	-,+,+,+,+	PLAC4,BACE2,MIR3197,BACE2,BACE2	13843,-3470,-3714,-3470,-3470
chr10:121354896-121355541	chr10	+	121354973	121355371	True	NM_001033925,NM_004281,NM_003252	chr10,chr10,chr10	-,+,-	TIAL1,BAG3,TIAL1	1220,55510,1220
chr2:64974785-64975639	chr2	+	64975210	64975479	True	NM_014755,NR_034023	chr2,chr2	-,+	SERTAD2,LOC339807	-94164,-140823
chr6:143408032-143408347	chr6	+	143408199	143408363	True	NM_016108,NM_006734	chr6,chr6	+,-	AIG1,HIVEP2	-26227,-141861
chr2:241079827-241080170	chr2	+	241079930	241080166	True	NM_001163424,NM_148961,NM_138336,NM_002081	chr2,chr2,chr2,chr2	-,-,-,+	MYEOV2,OTOS,MYEOV2,GPC1	-4183,-1,-4166,294948
chr8:9412473-9413226	chr8	+	9412538	9413090	True	NM_003747,NR_024281	chr8,chr8	+,-	TNKS,LOC157627	354,347799
chr16:58061536-58062270	chr16	+	58061905	58062209	True	NM_020807,NM_002428	chr16,chr16	-,+	ZNF319,MMP15	-28143,-2681
chr8:23564279-23564589	chr8	+	23564391	23564631	True	NM_016612,NM_001136271	chr8,chr8	+,-	SLC25A37,NKX2-6	-178079,-469
chr19:49468681-49468915	chr19	+	49468782	49468964	True	NM_000146,NM_001161587	chr19,chr19	+,-	FTL,GYS1	-267,27696
chr17:57654523-57655549	chr17	+	57654673	57655571	True	NM_016077,NM_024612	chr17,chr17	-,+	PTRH2,DHX40	129336,-11849
chr17:57654523-57655549	chr17	-	58074657	58075333	False	NM_003161,NR_002924	chr17,chr17	+,-	RPS6KB1,DHX40P1	-104266,21061
chr1:248099000-248099940	chr1	+	248099114	248099958	True	NM_175911,NM_001001959	chr1,chr1	+,-	OR2L13,OR11L1	534,-93916
chr16:24546622-24547342	chr16	+	24547004	24547223	True	NM_032626,NM_001006634,NM_018703,NM_006910	chr16,chr16,chr16,chr16	+,-,+,+	RBBP6,ARHGAP17,RBBP6,RBBP6	3684,479503,3684,3684
chr4:69326892-69328014	chr4_ctg9_hap1	+	156953	157908	False	NM_014058,NM_001076	chr4_ctg9_hap1,chr4_ctg9_hap1	+,-	TMPRSS11E,UGT2B15	-13922,91104
chr4:69326892-69328014	chr4	+	69327031	69327986	True	NM_014058,NM_001076	chr4,chr4	+,-	TMPRSS11E,UGT2B15	-13922,106305
chr1:21995889-21996281	chr1	+	21996058	21996310	True	NM_002885,NM_001145657,NM_001013693	chr1,chr1,chr1	-,-,+	RAP1GAP,RAP1GAP,LDLRAD2	-202,-202,142447
chr19:4230796-4231212	chr19	+	4230916	4231098	True	NM_005755,NM_016539	chr19,chr19	+,-	EBI3,SIRT6	-1427,-48320
chr6:143751565-143751793	chr6	+	143751569	143751631	True	NM_182503,NM_003630	chr6,chr6	-,+	ADAT2,PEX3	20260,20286
chr2:169312170-169312422	chr2	+	169312208	169312456	True	NM_203463,NM_013233	chr2,chr2	+,-	LASS6,STK39	378,-208103
chrX:63614119-63614617	chrX	+	63614273	63614613	True	NM_001010888,NM_017677	chrX,chrX	+,-	ZC3H12B,MTMR8	1094001,770
chr10:64148345-64149884	chr10	+	64148508	64149932	True	NM_199451,NM_145307	chr10,chr10	+,-	ZNF365,RTKN2	-14643,-120042
chrX:15392025-15393211	chrX	+	15392060	15393057	True	NM_004469,NM_203281	chrX,chrX	-,+	FIGF,BMX	9541,125842
chr15:90456973-90457859	chr15	+	90457009	90457883	True	NM_182616,NM_198526,NM_001199058	chr15,chr15,chr15	-,+,-	C15orf38,ZNF710,C15orf38-AP3S2	-787,86868,-787
chr22:46647891-46649690	chr22	+	46647890	46649286	True	NM_207327,NM_006071,NM_017931	chr22,chr22,chr22	-,-,+	C22orf40,PKDREJ,TTC38	-1697,9983,14574
chr17:33905886-33907666	chr17	+	33906043	33907294	True	NR_003037,NM_001282,NM_001030006,NM_000286	chr17,chr17,chr17,chr17	+,+,+,-	SNORD7,AP2B1,AP2B1,PEX12	-5429,6987,6987,-387
chr8:101326674-101328600	chr8	+	101326857	101327808	True	NM_183419,NM_003114	chr8,chr8	-,+	RNF19A,SPAG1	-4530,-156346
chr22:18561961-18562330	chr22	+	18562038	18562320	True	NM_001127649,NM_017929,NM_001199319,NM_001136004	chr22,chr22,chr22,chr22	+,+,+,-	PEX26,PEX26,PEX26,MICAL3	-1329,-1403,-1403,-54713
chr6:41891889-41893192	chr6	+	41892228	41893020	True	NM_004275,NM_004053	chr6,chr6	-,+	MED20,BYSL	-3351,-3323
chr1:21668885-21669380	chr1	+	21668899	21669421	True	NM_032264,NM_001113348	chr1,chr1	+,-	NBPF3,ECE1	97209,2663
chr17:38860981-38861372	chr17	+	38860984	38861168	True	NM_019016,NM_001195387	chr17,chr17	-,+	KRT24,TMEM99	-982,114175
chr2:33953048-33953250	chr2	+	33953069	33953257	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-214178,77
chr12:125350825-125351664	chr12	+	125350916	125351541	True	NM_005505,NM_080626,NM_001082959	chr12,chr12,chr12	-,+,-	SCARB1,BRI3BP,SCARB1	-2397,126652,-2397
chr19:43704886-43705667	chr19	+	43705007	43705567	True	NM_002780,NR_026881,NM_213633	chr19,chr19,chr19	-,+,-	PSG4,PRG1,PSG4	4273,147640,4273
chr12:58001456-58002359	chr12	+	58001562	58002150	True	NM_001111270,NM_182947,NM_178502,NM_001478	chr12,chr12,chr12,chr12	+,+,+,-	ARHGEF25,ARHGEF25,DTX3,B4GALNT1	1812,3067,-3009,24885
chr6:106537347-106537989	chr6	+	106537581	106537990	True	NM_182907,NM_004849,NM_001198	chr6,chr6,chr6	+,-,+	PRDM1,ATG5,PRDM1	8824,235756,-3448
chr6:82560262-82560535	chr6	+	82560272	82560394	True	NM_006670,NM_017633	chr6,chr6	+,-	TPBG,FAM46A	512528,-97844
chr19:2818863-2819632	chr19	+	2819032	2819658	True	NM_003021,NM_001102651	chr19,chr19	-,+	SGTA,ZNF554	-35678,213
chr4:71385898-71386970	chr4	+	71385905	71386677	True	NM_144646,NM_212557	chr4,chr4	-,+	IGJ,AMTN	145721,-1658
chr14:39901825-39902106	chr14	+	39901872	39901979	True	NM_203355,NM_203301	chr14,chr14	+,-	CTAGE5,FBXO33	-165595,-168
chr4:40516376-40516821	chr4	+	40516503	40516867	True	NM_019027,NM_017581	chr4,chr4	-,+	RBM47,CHRNA9	1173,-179085
chr1:230991137-230991706	chr1	+	230991167	230991652	True	NM_016452,NM_001136495	chr1,chr1	+,-	CAPN9,C1orf198	-108057,180
chrY:15585849-15587040	chrY	+	15586407	15587084	True	NM_007125,NM_182659,NM_182660,NM_004202	chrY,chrY,chrY,chrY	-,-,-,+	UTY,UTY,UTY,TMSB4Y	5524,5524,5524,228362
chr17:36862666-36863245	chr17	+	36862729	36863258	True	NM_001130677,NM_005937	chr17,chr17	-,+	C17orf96,MLLT6	-31542,-908
chr3:66300917-66301170	chr3	+	66300923	66301149	True	NR_028475,NM_015541	chr3,chr3	+,-	SLC25A26,LRIG1	-29806,249746
chr8:6265479-6265882	chr8	+	6265478	6265704	True	NM_001172575,NM_001172574,NM_001118887,NM_024596	chr8,chr8,chr8,chr8	+,+,-,+	MCPH1,MCPH1,ANGPT2,MCPH1	-1416,-1416,155138,-1416
chr17:79678298-79678511	chr17	+	79678307	79678459	True	NM_001040025,NM_002949,NM_012140	chr17,chr17,chr17	-,+,+	ARL16,MRPL12,SLC25A10	-27353,-7958,911
chr14:35344431-35346103	chr14	+	35344615	35346152	True	NR_002937,NM_182648,NM_013448	chr14,chr14,chr14	+,-,-	C14orf19,BAZ1A,BAZ1A	62975,52,52
chr15:65205215-65206617	chr15	+	65205251	65206113	True	NM_182703,NM_001127889	chr15,chr15	+,-	ANKDD1A,SPG21	-1202,75749
chr21:45710444-45710708	chr21	+	45710464	45710658	True	NR_024108,NM_000658,NM_000383,NM_175867,NM_002626	chr21,chr21,chr21,chr21,chr21	+,+,+,-,+	PFKL,AIRE,AIRE,DNMT3L,PFKL	9266,-241,-4752,-28365,9271
chr16:2068944-2069461	chr16	+	2068948	2069482	True	NM_001130012,NM_178167,NM_001099456,NM_004785	chr16,chr16,chr16,chr16	+,-,+,+	SLC9A3R2,ZNF598,NPW,SLC9A3R2	7405,-9185,38,7405
chr17:42274270-42274538	chr17	+	42274288	42274404	True	NM_020218,NM_024107,NM_177441,NM_001098833,NM_001076674	chr17,chr17,chr17,chr17,chr17	-,+,+,-,+	ATXN7L3,TMUB2,TMUB2,ATXN7L3,TMUB2	1175,-9985,-9765,1175,-9985
chr19:49891418-49891758	chr19	+	49891517	49891583	True	NM_144688,NM_003598	chr19,chr19	+,-	CCDC155,TEAD2	-93,-25803
chr3:10353896-10354198	chr3	+	10353991	10354165	True	NM_001136232,NR_024272,NM_183352,NR_024273,NR_024146	chr3,chr3,chr3,chr3,chr3	-,-,-,-,+	SEC13,SEC13,SEC13,SEC13,GHRLOS	8610,8743,8740,8743,-26612
chr1:916926-917156	chr1	+	916934	917156	True	NR_027693,NM_032129	chr1,chr1	-,+	C1orf170,PLEKHN1	367,-15108
chr9:103238106-103238798	chr9	+	103238322	103238649	True	NM_003692,NM_017746	chr9,chr9	+,-	TMEFF1,TEX10	-2867,-123063
chr13:100623329-100623534	chr13	+	100623328	100623420	True	NM_033132,NM_007129	chr13,chr13	-,+	ZIC5,ZIC2	808,10605
chr14:64109212-64110466	chr14	+	64109211	64109843	True	NM_080666,NM_001008726,NM_015180	chr14,chr14,chr14	-,-,+	WDR89,WDR89,SYNE2	-620,-1086,209839
chr19:30209131-30209913	chr19	+	30209492	30209762	True	NM_001031726,NM_024310,NM_031448	chr19,chr19,chr19	-,+,-	C19orf12,PLEKHF1,C19orf12	-3529,-53224,-3040
chr21:45876322-45876574	chr21	+	45876356	45876478	True	NM_198691,NM_030891	chr21,chr21	-,+	KRTAP10-1,LRRC3	83650,-1014
chr16:87638035-87638457	chr16	+	87638174	87638399	True	NM_020655,NM_015144	chr16,chr16	+,-	JPH3,ZCCHC14	-1726,-112714
chr1:16682273-16682696	chr1	+	16682604	16682724	True	NM_018994,NM_001114600	chr1,chr1	-,+	FBXO42,C1orf144	-3656,10858
chr14:100256833-100257972	chr14	+	100256893	100257918	True	NM_004434,NM_001008707,NM_001144995	chr14,chr14,chr14	+,+,-	EML1,EML1,CCDC85C	1826,1826,-186166
chr3:15537376-15538032	chr3	+	15537494	15538012	True	NM_033083,NM_080538,NR_036232	chr3,chr3,chr3	+,-,-	EAF1,COLQ,MIR4270	-68488,2417,23
chr14:20294010-20295843	chr15	+	22412826	22412876	True	NR_028067,NR_028506	chr15,chr15	+,-	OR4N3P,NF1P1	585,-267024
chr15:34727346-34728103	chr15	+	34727500	34728103	True	NM_175741,NR_027409	chr15,chr15	+,-	C15orf55,GOLGA8A	-89490,1614
chr6:110011744-110012158	chr6	+	110011881	110012121	True	NM_145025,NM_001145128,NM_014845	chr6,chr6,chr6	-,-,+	AKD1,AKD1,FIG4	344,344,302
chr2:3606799-3607071	chr2	+	3606982	3607120	True	NM_001011,NM_002936	chr2,chr2	+,-	RPS7,RNASEH1	15732,-1042
chr15:43882502-43883299	chr15	+	43882573	43883049	True	NM_001190214,NM_014659,NM_001130858,NM_001130859,NM_020990	chr15,chr15,chr15,chr15,chr15	-,-,-,-,+	PPIP5K1,PPIP5K1,PPIP5K1,PPIP5K1,CKMT1B	-122,-5483,-122,-122,2202
chr15:43882502-43883299	chr15	+	43982405	43982881	False	NM_001015001,NM_172097	chr15,chr15	+,-	CKMT1A,CATSPER2	2202,-41366
chr18:57640288-57640686	chr18	+	57640306	57640724	True	NM_133459,NM_021127	chr18,chr18	-,+	CCBE1,PMAIP1	-275662,-73165
chr2:150195219-150197093	chr2	+	150195321	150197129	True	NM_015702,NM_001195685,NM_194317	chr2,chr2,chr2	-,+,+	MMADHC,LYPD6,LYPD6	247251,-8885,-8355
chr19:49867530-49868610	chr19	+	49867618	49868650	True	NM_014419,NM_003598,NM_001197302,NM_001197301	chr19,chr19,chr19,chr19	+,-,+,+	DKKL1,TEAD2,DKKL1,DKKL1	-627,-1904,-682,-627
chr17:29251692-29252366	chr17	+	29251701	29251867	True	NM_024683,NM_018404	chr17,chr17	-,+	C17orf42,ADAP2	-18415,-2998
chr12:40460893-40461689	chr12	+	40460895	40461711	True	NM_052885,NM_198578	chr12,chr12	-,+	SLC2A13,LRRK2	38008,157101
chr19:44768386-44769866	chr19	+	44768395	44769902	True	NM_004234,NM_181756	chr19,chr19	-,+	ZNF235,ZNF233	39326,-4370
chr20:18120982-18121623	chr20	+	18120992	18121177	True	NR_028402,NM_020536,NM_001164811,NM_021220	chr20,chr20,chr20,chr20	+,+,+,-	CSRP2BP,CSRP2BP,PET117,OVOL2	4565,1690,-2544,-82471
chr4:174255492-174255757	chr4	+	174255501	174255793	True	NM_003864,NM_001130689,NM_001130688,NM_002129	chr4,chr4,chr4,chr4	+,-,-,-	SAP30,HMGB2,HMGB2,HMGB2	36299,-581,8,-52
chr19:36342536-36344253	chr19	+	36342588	36344189	True	NM_199180,NM_004646,NM_032123,NM_199179	chr19,chr19,chr19,chr19	+,-,+,+	KIRREL2,NPHS1,KIRREL2,KIRREL2	3620,-7,3620,3620
chr18:57566007-57566656	chr18	+	57566289	57566575	True	NM_133459,NM_021127	chr18,chr18	-,+	CCBE1,PMAIP1	-201645,616
chr9:108420433-108421874	chr9	+	108420603	108421830	True	NM_005502,NM_005421	chr9,chr9	-,+	ABCA1,TAL2	-730076,2907
chr16:20899871-20900404	chr16	+	20900066	20900142	True	NM_173475,NM_020424	chr16,chr16	-,+	DCUN1D3,LYRM1	11473,11414
chr13:44354219-44355474	chr13	+	44354702	44355478	True	NM_017993,NM_001128303	chr13,chr13	-,+	ENOX1,C13orf31	5678,97941
chr6:110672283-110672942	chr6	+	110672517	110672968	True	NM_001123364,NM_015891	chr6,chr6	-,+	C6orf186,CDC40	6557,-170955
chr9:133883326-133883675	chr9	+	133883521	133883586	True	NM_001145106,NM_006059	chr9,chr9	-,+	FIBCD1,LAMC3	-69066,917
chr3:120066701-120067525	chr3	+	120066761	120067483	True	NM_001099678,NM_001168331	chr3,chr3	-,+	LRRC58,NDUFB4	753,247644
chr11:118045938-118046464	chr11	+	118045972	118046364	True	NM_004588,NM_019894	chr11,chr11	-,+	SCN2B,TMPRSS4	1023,-98296
chr17:56059433-56060139	chr17	+	56059552	56060140	True	NM_007146,NM_080677	chr17,chr17	-,+	VEZF1,DYNLL2	5525,100639
chr5:140807244-140807485	chr5	+	140807255	140807519	True	NM_032091,NM_032092,NM_003735,NM_005642,NM_018914,NR_001297,NM_032094	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,-,+,+,+	PCDHGA11,PCDHGA11,PCDHGA12,TAF7,PCDHGA11,PCDHGB8P,PCDHGA12	-6769,-6769,2638,-106904,-6769,-1453,2638
chr22:38795573-38795965	chr22	+	38795718	38795994	True	NM_016657,NR_002821	chr22,chr22	+,-	KDELR3,LOC400927	68088,-787
chr22:38795573-38795965	chr20	+	52211942	52212002	False	NM_006526,NM_001193421	chr20,chr20	-,+	ZNF217,TSHZ2	-12306,-410171
chr16:28075777-28076358	chr16	+	28075835	28076315	True	NM_001024401,NM_001109763	chr16,chr16	+,-	SBK1,GSG1L	227524,-1005
chr21:44300586-44302005	chr21	+	44300684	44301839	True	NM_018669,NM_033661,NM_001001503	chr21,chr21,chr21	-,-,+	WDR4,WDR4,NDUFV3	-1006,-1006,11538
chr16:30042864-30043501	chr16	+	30042869	30043439	True	NM_031478,NM_001109660,NM_001109659	chr16,chr16,chr16	-,+,+	FAM57B,C16orf92,C16orf92	-683,-8265,-8265
chr12:43945510-43945768	chr12	+	43945642	43945808	True	NM_025003,NM_001114182	chr12,chr12	-,+	ADAMTS20,IRAK4	-34,206938
chr19:52554453-52556229	chr19	+	52554716	52555640	True	NM_024840,NM_014650	chr19,chr19	+,-	ZNF613,ZNF432	-124096,-2643
chr21:34543700-34544084	chr21	+	34543700	34544128	True	NR_024102,NM_000874	chr21,chr21	-,+	C21orf54,IFNAR2	-1159,58102
chr7:73040464-73041370	chr7	+	73040934	73041414	True	NM_032951,NM_032952,NM_032953,NM_032954,NM_001077621	chr7,chr7,chr7,chr7,chr7	-,-,-,-,+	MLXIPL,MLXIPL,MLXIPL,MLXIPL,VPS37D	-2064,-2064,-2064,-2064,40759
chr18:29303610-29304012	chr18	+	29303618	29303886	True	NM_001034172,NM_000371	chr18,chr18	-,+	MCART2,TTR	37007,-131945
chr1:173688211-173689233	chr1	+	173688325	173689125	True	NM_198493,NM_014458	chr1,chr1	-,+	ANKRD45,KLHL20	-49324,-4306
chr19:49657016-49658351	chr19	+	49657038	49658300	True	NM_001195227,NM_017636,NM_002152	chr19,chr19,chr19	+,+,-	TRPM4,TRPM4,HRC	2715,2715,431
chr19:10713918-10714171	chr19	+	10713924	10714219	True	NM_001145056,NM_005498	chr19,chr19	+,-	SLC44A2,AP1M2	-854,-15933
chr19:45058663-45059328	chr19	+	45058756	45059250	True	NM_001205280,NR_027754	chr19,chr19	+,-	LOC147710,CEACAM22P	57689,950
chr2:47002539-47004348	chr2	+	47002657	47004253	True	NR_034099,NM_001171506	chr2,chr2	+,-	LOC388948,MCFD2	39553,138811
chr16:15067969-15068386	chr16	+	15068259	15068406	True	NM_015027,NM_173474	chr16,chr16	+,-	PDXDC1,NTAN1	426,81484
chr16:15067969-15068386	chr16	-	70100433	70100484	False	NR_036265,NR_003610	chr16,chr16	+,-	MIR1972-2,PDXDC2P	-36236,-582
chr1:1354381-1354684	chr1	+	1354457	1354517	True	NR_026871,NM_001146685,NM_001145210	chr1,chr1,chr1	-,+,-	LOC441869,TMEM88B,LOC441869	2183,6990,2183
chr13:26862392-26863237	chr13	+	26862392	26862858	True	NM_001260,NM_005977	chr13,chr13	+,-	CDK8,RNF6	-33695,-65884
chrX:152954973-152955261	chrX	+	152954985	152955257	True	NM_001039582,NM_001142806,NM_005629,NM_001142805	chrX,chrX,chrX,chrX	-,+,+,+	PNCK,SLC6A8,SLC6A8,SLC6A8	-15169,-70,-1284,-1284
chr17:45920579-45921021	chr17	+	45920642	45920820	True	NM_001145023,NM_138355,NM_033413	chr17,chr17,chr17	-,-,+	SCRN2,SCRN2,LRRC46	-1943,-1943,-11700
chr17:20516148-20516680	chr17	+	20516147	20516525	True	NM_001190790,NR_029393	chr17,chr17	+,-	CDRT15L2,KRT16P3	-33161,-108336
chr2:160919651-160920292	chr2	+	160919693	160920159	True	NM_001195641,NM_022826,NM_007366,NM_001007267	chr2,chr2,chr2,chr2	-,+,-,-	PLA2R1,MARCH7,PLA2R1,PLA2R1	-567,-350734,-567,-567
chr11:67219286-67219496	chr11	+	67219323	67219493	True	NM_020441,NM_145200,NM_206997,NM_001018070	chr11,chr11,chr11,chr11	-,+,-,-	CORO1B,CABP4,GPR152,CORO1B	-8340,3324,757,-8060
chr4:85503733-85503973	chr4	+	85503746	85503806	True	NM_001263,NM_006168	chr4,chr4	+,-	CDS1,NKX6-1	250,-84359
chr19:4473106-4473886	chr19	+	4473457	4473915	True	NM_025241,NM_032631,NM_001001520	chr19,chr19,chr19	-,+,+	UBXN6,HDGFRP2,HDGFRP2	-15666,-1253,-1253
chr12:120430103-120431059	chr12	+	120430151	120431108	True	NM_207311,NM_007174	chr12,chr12	+,-	CCDC64,CIT	-2561,-115059
chr6:3909469-3911442	chr6	+	3909528	3911480	True	NM_183373,NM_012135	chr6,chr6	-,+	C6orf145,FAM50B	-157282,-59947
chrX:124096388-124097804	chrX	+	124096916	124097835	True	NM_014253,NM_001163278,NM_001163279,NM_001195272	chrX,chrX,chrX,chrX	-,-,-,+	ODZ1,ODZ1,ODZ1,LOC100129520	-48,-48,-48,356133
chr16:70720514-70720815	chr16	+	70720546	70720854	True	NM_001172772,NM_138383	chr16,chr16	+,-	IL34,MTSS1L	-62702,-592
chr6:3001613-3002701	chr6	+	3001811	3002486	True	NR_033884,NM_000904	chr6,chr6	-,+	LOC401233,NQO2	22569,-1796
chr12:124088229-124088440	chr12	+	124088236	124088328	True	NM_001414,NM_020936	chr12,chr12	-,+	EIF2B1,DDX55	30045,-1621
chr17:66509116-66509789	chr17	+	66509126	66509803	True	NR_027751,NM_212472,NM_212471,NM_002734	chr17,chr17,chr17,chr17	-,+,+,+	FAM20A,PRKAR1A,PRKAR1A,PRKAR1A	44820,-634,-1067,-634
chr18:29269629-29270937	chr18	+	29269764	29269998	True	NM_004775,NM_000371	chr18,chr18	-,+	B4GALT6,TTR	-5078,-98085
chr6:72596564-72596848	chr6	+	72596658	72596864	True	NR_026807,NM_014989	chr6,chr6	-,+	C6orf155,RIMS1	-466210,-59
chr9:69647846-69649444	chr9	+	69647945	69649185	True	NM_001085457,NR_024443	chr9,chr9	-,+	CBWD6,LOC100133920	-385352,2175
chr9:69647846-69649444	chr9	+	67286436	67287202	False	NM_032250,NR_002817	chr9,chr9	+,-	ANKRD20A1,AQP7P1	639558,2340
chr9:69647846-69649444	chr9	-	67033164	67034404	False	NR_024443,NR_024496	chr9,chr9	-,+	LOC100133920,LOC442421	-2182,-538946
chr9:69647846-69649444	chr9	+	33399230	33399286	False	NM_001170,NM_002504	chr9,chr9	-,+	AQP7,NFX1	3287,-108869
chr9:69647846-69649444	chr9	-	42860164	42861404	False	NR_026759,NR_026558	chr9,chr9	-,+	FAM95B1,AQP7P3	171964,-2063
chr17:79634997-79636334	chr17	+	79635161	79635723	True	NM_199287,NM_001039842	chr17,chr17	+,-	CCDC137,C17orf90	-1452,-1543
chr15:78191889-78192635	chr15	+	78191928	78192564	True	NM_001101404,NR_027024	chr15,chr15	+,-	SH2D7,LOC645752	192362,26674
chr15:78191889-78192635	chr15	-	75979022	75979500	False	NM_175881,NM_001897	chr15,chr15	+,-	ODF3L1,CSPG4	36818,25739
chr20:61339102-61339402	chr20	+	61339110	61339424	True	NM_002531,NR_024470	chr20,chr20	+,-	NTSR1,LOC100127888	764,-41137
chr1:202924486-202925062	chr1	+	202924606	202924774	True	NM_015999,NM_001127687,NM_138391	chr1,chr1,chr1	-,-,+	ADIPOR1,ADIPOR1,TMEM183A	2761,2976,51759
chr14:100073256-100073460	chr14	+	100073299	100073364	True	NM_032425,NM_001144995	chr14,chr14	+,-	HHIPL1,CCDC85C	38115,-2572
chr2:215368292-215369875	chr2	+	215368311	215369775	True	NM_000465,NM_001080500	chr2,chr2	-,+	BARD1,VWC2L	304716,-91909
chr15:48008474-48008965	chr15	+	48008524	48009014	True	NM_016132,NM_024966,NM_153617,NM_153616,NM_153619,NM_153618,NM_020858	chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,+,+,+,+,+,+	MYEF2,SEMA6D,SEMA6D,SEMA6D,SEMA6D,SEMA6D,SEMA6D	461602,1671,1671,1671,1671,1671,1671
chr2:74344963-74346401	chr2	+	74345214	74346177	True	NM_144993,NM_001035505	chr2,chr2	+,-	TET3,BOLA3	-71815,28913
chr10:45499406-45500579	chr10	+	45499412	45500521	True	NM_001039380,NM_006963	chr10,chr10	-,+	C10orf25,ZNF22	-2942,-3190
chr1:39492557-39492833	chr1	+	39492562	39492722	True	NM_001184979,NM_017821,NM_004552	chr1,chr1,chr1	+,-,+	NDUFS5,RHBDL2,NDUFS5	-646,-85106,-646
chr1:39488283-39489936	chr1	+	39488714	39489771	True	NM_001184979,NM_017821,NM_004552	chr1,chr1,chr1	+,-,+	NDUFS5,RHBDL2,NDUFS5	2195,-81258,2195
chr4:155490842-155492335	chr4	+	155490893	155492326	True	NM_002669,NM_005141,NM_000508,NM_001184741	chr4,chr4,chr4,chr4	-,+,-,+	PLRG1,FGB,FGA,FGB	-19308,-6812,19622,-6812
chrX:21391307-21391845	chrX	+	21391346	21391753	True	NM_001168647,NM_001168648,NM_001168649,NM_014927,NM_153270	chrX,chrX,chrX,chrX,chrX	+,+,+,+,-	CNKSR2,CNKSR2,CNKSR2,CNKSR2,KLHL34	782,782,782,782,284746
chr7:74934795-74936010	chr7	+	74935075	74935139	True	NR_003614,NR_003664	chr7,chr7	-,+	PMS2L2,SPDYE8P	53126,1393
chr7:74934795-74936010	chr7	-	72501702	72501766	False	NR_003614,NR_003664	chr7,chr7	+,-	PMS2L2,SPDYE8P	-25073,-1393
chr7:74934795-74936010	chr7	+	74963100	74963164	False	NR_003614,NR_003664	chr7,chr7	-,+	PMS2L2,SPDYE8P	25101,1395
chr12:50016202-50016461	chr12	+	50016297	50016477	True	NM_012272,NM_001031698,NM_032130	chr12,chr12,chr12	+,+,-	PRPF40B,PRPF40B,FAM186B	925,7849,-16864
chr6:159278647-159278995	chr6	+	159278685	159278837	True	NR_028496,NM_001195032	chr6,chr6	-,+	OSTCL,C6orf99	-21,30781
chr8:28747458-28747797	chr8	+	28747465	28747845	True	NM_001172562,NM_024567,NR_026826,NM_001135726,NM_018250,NM_001145159	chr8,chr8,chr8,chr8,chr8,chr8	-,+,-,+,-,-	INTS9,HMBOX1,INTS9,HMBOX1,INTS9,INTS9	-33,379,79,65,79,79
chr1:154126569-154127196	chr1	+	154126627	154127155	True	NM_001159484,NM_207308,NM_001127320	chr1,chr1,chr1	-,-,+	NUP210L,NUP210L,UBAP2L	487,487,65499
chr11:32817529-32818410	chr11	+	32817603	32818233	True	NM_001008391,NM_024081	chr11,chr11	-,+	CCDC73,PRRG4	-1416,33255
chr16:85340437-85340723	chr16	+	85340465	85340719	True	NR_033984,NM_198491	chr16,chr16	+,-	LOC400548,FAM92B	-169760,-194351
chr1:89607587-89608024	chr1	+	89607590	89608026	True	NM_198460,NM_004120	chr1,chr1	+,-	GBP6,GBP2	221409,-15791
chr16:67223039-67223270	chr16	+	67223063	67223137	True	NM_024712,NM_001950,NM_178516,NM_001040715	chr16,chr16,chr16,chr16	+,+,-,-	ELMO3,E2F4,EXOC3L1,KIAA0895L	9890,2930,1020,-5180
chr8:89339103-89339530	chr8	+	89339109	89339467	True	NM_005941,NM_003821	chr8,chr8	-,+	MMP16,RIPK2	300,1430507
chrX:55744296-55744835	chrX	+	55744314	55744802	True	NM_201286,NM_016656,NM_006064	chrX,chrX,chrX	-,+,+	USP51,RRAGB,RRAGB	-228683,-255,-255
chr1:231541084-231541830	chr1	+	231541328	231541661	True	NM_032018,NM_022051	chr1,chr1	+,-	C1orf124,EGLN1	-67697,19190
chr17:80693576-80693798	chr17	+	80693591	80693847	True	NM_022158,NM_006822	chr17,chr17	+,-	FN3K,RAB40B	-190,-36993
chr5:180238206-180238793	chr5	+	180238219	180238762	True	NM_001114617,NM_001114618,NM_001114619,NR_027183,NM_002406,NM_001114620	chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,+,-,-	MGAT1,MGAT1,MGAT1,LOC729678,MGAT1,MGAT1	-1082,-1402,-7317,18196,-8171,-7317
chr19:58694135-58694347	chr19	+	58694155	58694395	True	NM_024620,NM_016325,NM_133502,NM_016324	chr19,chr19,chr19,chr19	-,+,+,+	ZNF329,ZNF274,ZNF274,ZNF274	-32007,0,0,0
chr22:35920448-35922216	chr22	+	35920562	35921802	True	NM_005368,NM_014310	chr22,chr22	-,+	MB,RASD2	91632,15549
chr1:1680543-1680782	chr1	+	1680544	1680822	True	NM_182838,NM_001198995,NM_001199787,NR_002946	chr1,chr1,chr1,chr1	-,-,-,+	SLC35E2,NADK,SLC35E2,MMP23A	-3106,9309,-3106,-49217
chr1:1680543-1680782	chr1	+	1628070	1628120	False	NM_001110781,NR_002946	chr1,chr1	-,+	SLC35E2B,MMP23A	-3827,3257
chr22:21089808-21090020	chr22	+	21089814	21089996	True	NM_002650,NR_026815	chr22,chr22	-,+	PI4KA,TMEM191A	-859,-34463
chr22:21089808-21090020	chr22	+	20399667	20399849	False	NR_003563,NR_026919	chr22,chr22	-,+	PI4KAP1,LOC150197	-972,-205863
chr22:21089808-21090020	chr22	+	21843642	21843824	False	NM_015094,NR_003700	chr22,chr22	+,-	HIC2,PI4KAP2	-72000,28006
chrX:101180872-101181604	chrX	+	101180903	101181568	True	NM_001011657,NM_080390	chrX,chrX	-,+	ZMAT1,TCEAL2	5522,199091
chr14:105563604-105564049	chr14	+	105563630	105564068	True	NM_174891,NM_013345	chr14,chr14	+,-	C14orf79,GPR132	-111065,-31876
chr2:201759286-201760064	chr2	+	201759595	201760113	True	NM_001142356,NM_032472,NM_001142355,NM_001136039,NM_130906,NM_021824	chr2,chr2,chr2,chr2,chr2,chr2	+,-,+,+,-,+	NIF3L1,PPIL3,NIF3L1,NIF3L1,PPIL3,NIF3L1	-3007,-5746,-5598,-5598,-5746,-5540
chr19:47987543-47988250	chr19	+	47987693	47988298	True	NM_015711,NM_007059	chr19,chr19	+,-	GLTSCR1,KPTN	123154,-172
chr12:46660722-46661130	chr12	+	46660737	46661128	True	NM_001077484,NM_030674,NM_152641	chr12,chr12,chr12	-,-,+	SLC38A1,SLC38A1,ARID2	2130,2130,-537168
chr16:74331044-74331564	chr16	+	74331136	74331521	True	NR_026950,NM_002811	chr16,chr16	-,+	LOC283922,PSMD7	70689,-514
chr1:161202595-161203021	chr1	+	161202598	161202972	True	NM_001077470,NM_001077471,NM_001077472,NM_001077473,NM_001077474,NM_001077475,NM_001077476,NM_001077477,NM_001077478,NM_001077479,NM_001077469,NM_001077481,NM_001077480,NM_001077482,NM_032174,NM_005122,NM_001643	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,-,-,-,-,-,-,-,-,-,+,-,-	NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,TOMM40L,NR1I3,APOA2	5078,5078,5078,5078,5078,5078,5078,5078,5078,5078,5078,5078,5078,5078,-6816,5078,-9180
chr5:161124518-161124992	chr5	+	161124593	161124898	True	NM_000811,NM_021911	chr5,chr5	+,-	GABRA6,GABRB2	-11986,-149463
chr4:140378611-140379712	chr4	+	140378615	140379196	True	NM_031296,NM_030648	chr4,chr4	+,-	RAB33B,SETD7	-3709,98440
chr8:120104399-120104864	chr8	+	120104603	120104876	True	NM_002546,NM_006438	chr8,chr8	-,+	TNFRSF11B,COLEC10	-140220,-25240
chr3:50335598-50336057	chr3	+	50335647	50336073	True	NM_001200016,NM_001200029,NM_003549,NM_001200030,NM_001200031,NM_001200032,NM_012191,NM_001200018,NM_153285,NM_007312,NM_153282,NM_153215,NM_153283,NM_006764,NM_033159	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,-,-,-,-,-,-,-,+,-,-,-	NAT6,HYAL3,HYAL3,HYAL3,HYAL3,HYAL3,NAT6,NAT6,HYAL1,HYAL1,HYAL1,C3orf45,HYAL1,IFRD2,HYAL1	829,270,876,876,876,876,829,297,4981,4981,4981,-19180,4981,-5621,4981
chr6:41019483-41020220	chr6	+	41019662	41020194	True	NM_001010873,NM_001159726,NM_173561,NM_006789	chr6,chr6,chr6,chr6	+,+,-,+	TSPO2,TSPO2,UNC5CL,APOBEC2	-9478,-9258,-12724,745
chr14:74956496-74957866	chr14	+	74956570	74957688	True	NM_194279,NM_006432	chr14,chr14	+,-	ISCA2,NPC2	2761,2446
chr2:75935928-75937756	chr2	+	75935928	75937574	True	NM_001201334,NM_001201335,NM_014763,NM_003203	chr2,chr2,chr2,chr2	-,-,+,-	C2orf3,C2orf3,MRPL19,C2orf3	208,587,-62071,587
chr3:187083182-187084421	chr3	+	187083267	187084459	True	NM_022147,NM_001031849	chr3,chr3	+,-	RTP4,MASP1	1708,-73457
chr16:8806593-8806916	chr16	+	8806619	8806797	True	NM_001127448,NM_000663,NM_015421	chr16,chr16,chr16	+,+,-	ABAT,ABAT,TMEM186	7775,28,84758
chr4:1166985-1167225	chr4	+	1167013	1167105	True	NR_033339,NM_012445,NM_001128325	chr4,chr4,chr4	+,-,-	C4orf42,SPON2,SPON2	76122,-356,-14
chr10:99080423-99080798	chr10	+	99080427	99080832	True	NM_005479,NM_012083	chr10,chr10	+,-	FRAT1,FRAT2	-1456,13676
chr17:25411263-25412775	chr17	+	25411310	25412806	True	NM_015626,NM_000625	chr17,chr17	+,-	WSB1,NOS2	208299,714817
chr8:21790535-21790770	chr8	+	21790538	21790610	True	NM_003974,NM_015024	chr8,chr8	-,+	DOK2,XPO7	-19333,-13418
chr19:36054571-36055148	chr19	+	36054779	36055030	True	NM_000704,NM_032635	chr19,chr19	-,+	ATP4A,TMEM147	-219,-18285
chrX:51933444-51933689	chrX	+	51933469	51933671	True	NM_001098800,NM_177537,NM_177535,NM_030801,NR_003712,NR_003711	chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,-,+	MAGED4,MAGED4B,MAGED4B,MAGED4B,SNORA11E,SNORA11D	-5512,-5601,-5601,-5601,223,46
chrX:51933444-51933689	chrX	-	51806615	51806817	False	NM_001098800,NM_177537,NM_177535,NM_030801,NR_003712,NR_003711	chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,+,-	MAGED4,MAGED4B,MAGED4B,MAGED4B,SNORA11E,SNORA11D	5512,5601,5601,5601,-223,-46
chr6:24351507-24352053	chr6	+	24351523	24351947	True	NM_016356,NM_181337	chr6,chr6	-,+	DCDC2,KAAG1	6393,5183
chr19:40263079-40264123	chr19	+	40263144	40264130	True	NM_001828,NM_001143832	chr19,chr19	-,+	CLC,LEUTX	-34476,3103
chr19:33460854-33462063	chr19	+	33460966	33462061	True	NM_152266,NM_032816	chr19,chr19	+,-	C19orf40,CCDC123	1086,858
chr12:30850082-30851858	chr12	+	30850289	30851601	True	NM_006390,NM_001080509	chr12,chr12	-,+	IPO8,TSPAN11	-1360,228236
chr4:2248105-2248399	chr4	+	2248211	2248337	True	NM_001193282,NM_024511	chr4,chr4	+,-	LOC402160,HAUS3	172363,-4351
chr17:62402670-62403882	chr17	+	62403138	62403600	True	NM_000442,NM_001085423	chr17,chr17	-,+	PECAM1,C17orf60	3533,57968
chr22:44894288-44894577	chr22	+	44894351	44894465	True	NR_028409,NM_032287	chr22,chr22	+,-	NCRNA00207,LDOC1L	70754,-346
chr19:38826564-38826854	chr19	+	38826754	38826890	True	NM_001145463,NM_021185	chr19,chr19	-,+	YIF1B,CATSPERG	-20148,-362
chr12:112198976-112199874	chr12	+	112199176	112199860	True	NM_006768,NM_001204889,NM_000690	chr12,chr12,chr12	-,+,+	BRAP,ALDH2,ALDH2	-75386,4830,4830
chr12:33594329-33595798	chr12	+	33594439	33595628	True	NM_198992,NM_032834	chr12,chr12	-,+	SYT10,ALG10	-1685,579587
chr8:57359674-57359898	chr8	+	57359729	57359897	True	NM_001135690,NM_024300,NM_006211	chr8,chr8,chr8	-,+,-	PENK,CHCHD7,PENK	-447,-235465,-1136
chr21:45577320-45577521	chr21	+	45577334	45577496	True	NM_198155,NM_015259	chr21,chr21	+,-	C21orf33,ICOSLG	-23891,83388
chr20:61339402-61339736	chr20	+	61339508	61339608	True	NM_002531,NR_024470	chr20,chr20	+,-	NTSR1,LOC100127888	580,-41535
chr6:33245495-33245879	chr6_qbl_hap6	+	4477741	4478119	False	NM_003782,NM_022551,NM_022553	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	+,+,-	B3GALT4,RPS18,VPS52	-636,-5704,-5843
chr6:33245495-33245879	chr6_mcf_hap5	+	4719276	4719654	False	NM_003782,NM_022551,NM_022553	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	+,+,-	B3GALT4,RPS18,VPS52	-636,-5705,-5844
chr6:33245495-33245879	chr6_cox_hap2	+	4689312	4689690	False	NM_003782,NM_022551,NM_022553	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,+,-	B3GALT4,RPS18,VPS52	-636,-5701,-5840
chr6:33245495-33245879	chr6	+	33245502	33245880	True	NM_003782,NM_022551,NM_022553	chr6,chr6,chr6	+,+,-	B3GALT4,RPS18,VPS52	-636,-5701,-5840
chr6:33245495-33245879	chr6_dbb_hap3	+	4526824	4527202	False	NM_003782,NM_022551,NM_022553	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	+,+,-	B3GALT4,RPS18,VPS52	-636,-5701,-5840
chr5:140620962-140621214	chr5	+	140621059	140621191	True	NM_018935,NR_001282,NR_001281,NM_031947	chr5,chr5,chr5,chr5	+,+,+,-	PCDHB15,PCDHB19P,PCDHB18,SLC25A2	3955,-1421,-7172,62471
chr4:74719227-74719595	chr4	+	74719248	74719456	True	NM_002620,NM_002619	chr4,chr4	+,-	PF4V1,PF4	-286,128309
chr15:25620122-25621319	chr15	+	25620244	25621243	True	NM_130838,NR_001295	chr15,chr15	-,+	UBE3A,SNORD109A	29470,-96818
chr6:12009532-12011069	chr6	+	12009553	12011002	True	NM_032744,NM_002114	chr6,chr6	-,+	C6orf105,HIVEP1	-230273,1721
chrX:153707544-153707808	chrX	+	153707757	153707821	True	NM_014235,NM_017514,NM_006014	chrX,chrX,chrX	-,+,-	UBL4A,PLXNA3,LAGE3	7161,-21185,-161
chr17:41132048-41132368	chr17	+	41132053	41132417	True	NM_001142653,NM_001136042,NM_025267,NM_173079,NM_001142654	chr17,chr17,chr17,chr17,chr17	-,-,-,+,-	AARSD1,AARSD1,AARSD1,RUNDC1,AARSD1	178,178,-33,164,178
chr21:34864738-34865296	chr21	+	34865034	34865242	True	NM_032195,NM_001040192,NM_017833	chr21,chr21,chr21	+,-,-	SON,DNAJC28,DNAJC28	50107,-1011,-1244
chr20:33133517-33134060	chr20	+	33133660	33133910	True	NM_080476,NM_181509	chr20,chr20	-,+	PIGU,MAP1LC3A	131229,781
chr7:119371749-119372653	chr7	+	119371777	119372579	True	NM_012281,NM_012338	chr7,chr7	+,-	KCND2,TSPAN12	541142,1125648
chr9:112403820-112405081	chr9	+	112403956	112404530	True	NM_002829,NM_001037293	chr9,chr9	-,+	PTPN3,PALM2	-143363,-939
chr6:43735402-43737017	chr6	+	43735616	43736825	True	NM_018135,NM_001025369,NM_001025368,NM_001025367,NM_001025366,NM_001033756,NM_001025370,NM_003376,NM_001171624,NM_001171625,NM_001171626,NM_001171627,NM_001171622,NM_001171623,NM_001204384,NM_001204385,NM_001171628,NM_001171629,NM_001171630	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+	MRPS18A,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA	-80067,1120,1120,1120,1120,1120,1120,1120,1120,1120,1120,1120,1120,1120,1120,1120,1120,1120,1120
chr11:65779375-65779592	chr11	+	65779443	65779545	True	NM_003860,NM_001143985,NM_001323,NM_032325	chr11,chr11,chr11,chr11	+,+,+,-	BANF1,BANF1,CST6,EIF1AD	-9944,-9944,-32,-9865
chr9:32551379-32552271	chr9	+	32551396	32551978	True	NM_001195622,NM_005802,NR_033992,NR_033991	chr9,chr9,chr9,chr9	-,-,+,+	TOPORS,TOPORS,LOC100129250,LOC100129250	698,698,-4,-305
chr19:56633360-56634092	chr19	+	56633404	56634032	True	NM_001002836,NM_018337	chr19,chr19	-,+	ZNF787,ZNF444	-755,18523
chr14:24804673-24804928	chr14	+	24804705	24804927	True	NM_139247,NM_181657,NM_001198592,NM_001198568,NM_006871	chr14,chr14,chr14,chr14,chr14	-,+,-,-,-	ADCY4,LTB4R,ADCY4,ADCY4,RIPK3	-428,-22443,-428,-428,4365
chr11:118959146-118959919	chr11	+	118959154	118959860	True	NM_000190,NM_001024382,NM_002105	chr11,chr11,chr11	+,+,-	HMBS,HMBS,H2AFX	-3619,-509,6367
chr17:47923521-47923932	chr17	+	47923917	47923981	True	NM_001077504,NM_001077505,NM_001077506,NM_007067,NM_001077503,NM_170685	chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,+,-,-	TAC4,TAC4,TAC4,MYST2,TAC4,TAC4	1448,1448,1448,-57987,1448,1448
chr6:164723589-164724502	chr6	+	164723604	164724492	True	NM_206855,NR_037593	chr6,chr6	+,-	QKI,LOC100526820	-887988,-888622
chr17:60352386-60352644	chr17	+	60352458	60352520	True	NR_027486,NM_001144933	chr17,chr17	-,+	TBC1D3P2,EFCAB3	546,95058
chr1:180885225-180885615	chr1	+	180885240	180885558	True	NM_020950,NM_005819	chr1,chr1	+,-	KIAA1614,STX6	-2978,106538
chr15:102504366-102506046	chr1	-	25542	25596	True	NM_001005221,NR_028325	chr1,chr1	-,+	OR4F29,LOC100132062	596492,298295
chrX:135859103-135860931	chrX	+	135860354	135860982	True	NM_004840,NM_000074	chrX,chrX	-,+	ARHGEF6,CD40LG	2573,-130071
chr1:2162291-2162929	chr1	+	2162759	2162833	True	NM_001146310,NM_003036	chr1,chr1	-,+	C1orf86,SKI	-23587,-2676
chr6:20401462-20401750	chr6	+	20401551	20401718	True	NM_001949,NM_001080480	chr6,chr6	+,-	E2F3,MBOAT1	418,-188881
chr10:73633717-73634030	chr10	+	73633748	73633977	True	NM_001171936,NM_002778	chr10,chr10	+,-	CDH23,PSAP	-62167,-22666
chr17:42465115-42465883	chr17	+	42465236	42465706	True	NM_000419,NM_002087	chr17,chr17	-,+	ITGA2B,GRN	1219,-42797
chr11:63304961-63305435	chr11	+	63305043	63305223	True	NM_017878,NM_004585	chr11,chr11	-,+	HRASLS2,RARRES3	25682,-821
chr12:111127964-111128576	chr12	+	111128015	111128133	True	NM_001040107,NM_032369,NM_001173975	chr12,chr12,chr12	-,-,+	HVCN1,HVCN1,TCTN1	-398,-1069,-76154
chr17:48585396-48585716	chr17	+	48585528	48585706	True	NM_032133,NM_001267	chr17,chr17	+,-	MYCBPAP,CHAD	38,-39301
chrX:148621375-148622017	chrX	+	148621406	148622012	True	NM_001171909,NM_001171907,NM_178124,NM_001171908,NR_027455	chrX,chrX,chrX,chrX,chrX	+,+,+,+,-	CXorf40A,CXorf40A,CXorf40A,CXorf40A,LOC100131434	4053,506,506,506,-94
chrX:148621375-148622017	chrX	-	149108133	149108183	False	NR_027456,NM_001013845	chrX,chrX	+,-	LOC100272228,CXorf40B	-1418,-1417
chr17:7163597-7164127	chr17	+	7163681	7164035	True	NM_015343,NM_001307,NM_203415,NM_203414,NM_203413,NM_001143775,NM_015362,NM_001185023,NM_001185022	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,+,+,-,+,-,-	CTDNEP1,CLDN7,C17orf81,C17orf81,C17orf81,CTDNEP1,C17orf81,CLDN7,CLDN7	-8422,2279,-8360,-8181,-8181,-8686,-8181,2279,2527
chr3:194031867-194033174	chr3	+	194031934	194033059	True	NR_033929,NR_024480	chr3,chr3	+,-	FLJ34208,LOC100131551	174809,-1341
chr2:10182548-10182876	chr2	+	10182696	10182824	True	NM_001177716,NM_003597,NM_001037160,NM_001177718	chr2,chr2,chr2,chr2	+,+,-,+	KLF11,KLF11,CYS1,KLF11	1131,857,37764,1547
chr5:159797671-159798213	chr5	+	159797741	159798227	True	NM_031908,NM_004219	chr5,chr5	-,+	C1QTNF2,PTTG1	-93,50637
chr9:140473748-140474088	chr9	+	140473868	140474111	True	NM_152285,NM_138778	chr9,chr9	+,-	ARRDC1,WDR85	25984,-481
chr3:37283703-37283917	chr3	+	37283713	37283932	True	NM_002078,NM_017724,NM_001172713	chr3,chr3,chr3	+,-,+	GOLGA4,LRRFIP2,GOLGA4	749,-65862,749
chr15:64444968-64445717	chr15	+	64445043	64445667	True	NM_024798,NM_000942	chr15,chr15	+,-	SNX22,PPIB	-1186,9737
chr4:139938704-139940367	chr4	+	139938992	139940071	True	NM_006874,NM_012118	chr4,chr4	-,+	ELF2,CCRN4L	65634,-2111
chr5:71404787-71405481	chr5	+	71404922	71405519	True	NM_005909,NM_015084	chr5,chr5	+,-	MAP1B,MRPS27	-1855,210615
chr22:38573764-38574591	chr22	+	38573789	38574302	True	NM_003560,NM_001199562,NM_001161572,NM_001004426	chr22,chr22,chr22,chr22	-,-,+,-	PLA2G6,PLA2G6,MAFF,PLA2G6	3510,3585,23636,3510
chr17:70118314-70118573	chr17	+	70118367	70118621	True	NM_000346,NR_036488	chr17,chr17	+,-	SOX9,LOC100499467	-1257,470372
chr11:27373507-27373834	chr11	+	27373520	27373615	True	NR_002832,NM_030771	chr11,chr11	+,-	BDNF-AS1,CCDC34	154783,11231
chr12:38472324-38472775	chr12	+	38472348	38472766	True	NM_001013620,NM_153634	chr12,chr12	+,-	ALG10B,CPNE8	237790,826704
chr2:38365629-38365872	chr2	+	38365735	38365861	True	NR_027252,NM_000104	chr2,chr2	+,-	C2orf58,CYP1B1	-7546,-62412
chr17:18163666-18163934	chr17	+	18163665	18163895	True	NM_001144900,NM_002018,NM_148886,NM_139162	chr17,chr17,chr17,chr17	+,-,+,+	SMCR7,FLII,SMCR7,SMCR7	-30,-1610,528,-30
chr7:20702783-20703497	chr7	+	20702785	20703323	True	NM_178559,NM_182700	chr7,chr7	+,-	ABCB5,SP8	-15870,123235
chr11:70993760-70994329	chr11	+	70993819	70994367	True	NM_018161,NM_012309	chr11,chr11	+,-	NADSYN1,SHANK2	169849,-58011
chr11:133771376-133773284	chr11	+	133771563	133773327	True	NR_024344,NR_027276	chr11,chr11	-,+	LOC283174,LOC100128239	72,128839
chr1:23519252-23519590	chr1	+	23519439	23519638	True	NR_036057,NM_000864	chr1,chr1	+,-	MIR3115,HTR1D	-148703,1637
chr17:41177461-41177690	chr17	+	41177520	41177690	True	NM_005440,NM_006373	chr17,chr17	+,-	RND2,VAT1	-313,-3061
chr17:39502725-39503259	chr17	+	39502741	39503173	True	NM_030975,NM_004138	chr17,chr17	+,-	KRTAP9-9,KRT33A	-91156,3933
chr17:39502725-39503259	chr17	+	39521072	39521122	False	NM_030975,NM_002279	chr17,chr17	+,-	KRTAP9-9,KRT33B	-109487,4975
chr19:50879877-50880968	chr19	+	50879968	50880985	True	NM_007121,NM_002691,NM_004851	chr19,chr19,chr19	+,+,-	NR1H2,POLD1,NAPSA	-334,6607,-11037
chr1:220927282-220928982	chr1	+	220927622	220929002	True	NM_017898,NM_012414	chr1,chr1	+,-	MOSC2,RAB3GAP2	-5998,-481779
chr7:6413675-6413933	chr7	+	6413870	6413976	True	NM_006908,NM_018890,NM_001037163	chr7,chr7,chr7	+,+,-	RAC1,RAC1,C7orf70	149,149,-25280
chr3:49974210-49974922	chr3	+	49974488	49974776	True	NM_001167582,NM_005777,NM_032355,NM_001142501	chr3,chr3,chr3,chr3	+,+,-,-	RBM6,RBM6,MON1A,MON1A	2700,2700,-7043,-7043
chr12:110212287-110213282	chr12	+	110212297	110213327	True	NR_026662,NM_032829,NR_026661	chr12,chr12,chr12	-,+,-	MGC14436,C12orf34,MGC14436	-1005,-60174,-1008
chr6:53609249-53610943	chr6	+	53609249	53610716	True	NM_018214,NM_001003760	chr6,chr6	+,-	LRRC1,KLHL31	49061,-78743
chr12:10532957-10534833	chr12	+	10533065	10534869	True	NM_007360,NM_007334	chr12,chr12	-,+	KLRK1,KLRD1	7841,-72706
chr5:171435905-171436203	chr5	+	171435977	171436141	True	NM_012300,NM_001171183,NM_033645,NM_033644	chr5,chr5,chr5,chr5	-,+,-,-	FBXW11,EFCAB9,FBXW11,FBXW11	-2100,185034,-2100,-2100
chr9:35754419-35754620	chr9	+	35754509	35754657	True	NM_020944,NM_001080496,NM_001044264	chr9,chr9,chr9	-,+,-	GBA2,RGP1,MSMP	-5284,-5283,-235
chr9:139307813-139308478	chr9	+	139307880	139308526	True	NM_006643,NM_015160,NM_001039707,NM_001039708	chr9,chr9,chr9,chr9	-,+,-,-	SDCCAG3,PMPCA,SDCCAG3,SDCCAG3	-2826,-2815,-2826,-2826
chr3:193968264-193968647	chr3	+	193968312	193968674	True	NR_024480,NM_005524	chr3,chr3	-,+	LOC100131551,HES1	61969,-114438
chr8:38005944-38006225	chr8	+	38006141	38006203	True	NM_001204878,NM_000349	chr8,chr8	+,-	BAG4,STAR	27902,2447
chr19:17580638-17581052	chr19	+	17580776	17581044	True	NM_198580,NM_138454	chr19,chr19	+,-	SLC27A1,NXNL1	255,-9051
chr10:74451134-74451827	chr10	+	74451333	74451734	True	NM_138357,NM_006077	chr10,chr10	+,-	CCDC109A,CBARA1	154,-65384
chr7:56355689-56357290	chr7	+	56355854	56357248	True	NR_029420,NR_026929	chr7,chr7	-,+	LOC650226,DKFZp434L192	158870,206667
chr21:40753022-40754139	chr21	+	40753037	40753553	True	NM_004627,NM_004965,NM_001146218	chr21,chr21,chr21	+,-,+	WRB,HMGN1,WRB	-875,-31990,6138
chr8:106332038-106333925	chr8	+	106332083	106333970	True	NM_013437,NM_012082	chr8,chr8	-,+	LRP12,ZFPM2	-730831,-987
chr12:9314851-9315971	chr12	+	9314935	9315797	True	NM_002864,NR_036466	chr12,chr12	-,+	PZP,LOC100499405	45226,76801
chr1:892649-893539	chr1	+	892736	893432	True	NM_015658,NM_198317,NM_001160184,NM_032129	chr1,chr1,chr1,chr1	-,+,+,+	NOC2L,KLHL17,PLEKHN1,PLEKHN1	1297,2534,8444,8444
chr4:24587715-24589233	chr4	+	24587889	24589033	True	NM_001358,NM_003102	chr4,chr4	-,+	DHX15,SOD3	-1705,208051
chr10:33610754-33612007	chr10	+	33610828	33612021	True	NM_024688,NM_003873	chr10,chr10	+,-	C10orf68,NRP1	-754230,11862
chr1:78480704-78481776	chr1	+	78480719	78481822	True	NM_007034,NM_003902	chr1,chr1	+,-	DNAJB4,FUBP1	-10141,-35942
chr14:45431472-45431941	chr14	+	45431547	45431951	True	NM_017658,NM_015091	chr14,chr14	-,+	KLHL28,FAM179B	-368,-182
chr6:126070917-126072669	chr6	+	126070933	126072685	True	NM_016063,NM_012259	chr6,chr6	-,+	HDDC2,HEY2	-447651,-252
chr1:25873126-25873920	chr1	+	25873165	25873609	True	NM_015627,NM_138618	chr1,chr1	+,-	LDLRAP1,RHCE	-3140,-125802
chr2:131977232-131977819	chr2	+	131977527	131977779	True	NM_001009993,NM_001083538	chr2,chr2	-,+	FAM168B,POTEE	-126523,-1660
chr2:131977232-131977819	chr2	-	130876284	130876536	False	NM_001099771,NR_033903	chr2,chr2	-,+	POTEF,LOC285103	10315,10659
chr21:40127656-40128417	chr21	+	40127674	40128254	True	NR_027067,NM_005239	chr21,chr21	-,+	NCRNA00114,ETS2	-3493,49594
chr18:73144030-73145388	chr18	+	73144180	73145372	True	NM_005786,NM_001037331	chr18,chr18	+,-	TSHZ1,C18orf62	-221500,-4591
chr2:241623386-241623949	chr2	+	241623431	241623857	True	NM_198998,NM_001102467	chr2,chr2	+,-	AQP12A,AQP12B	7404,-1114
chr2:241623386-241623949	chr2	-	241629732	241629782	False	NM_198998,NM_001102467	chr2,chr2	+,-	AQP12A,AQP12B	1479,-7415
chr3:152554145-152554428	chr3	+	152554164	152554446	True	NM_002563,NM_001123228	chr3,chr3	+,-	P2RY1,TMEM14E	-1479,-495385
chr12:121789558-121789788	chr12	+	121789575	121789807	True	NM_001137559,NM_016237,NM_025126	chr12,chr12,chr12	-,-,+	ANAPC5,ANAPC5,RNF34	2255,508,48094
chr6:170103044-170103784	chr6	+	170103046	170103813	True	NM_182552,NM_001202550,NM_001029863	chr6,chr6,chr6	-,-,+	WDR27,WDR27,C6orf120	-887,-887,-840
chr14:61115422-61115919	chr14	+	61115446	61115914	True	NM_001177963,NM_005982	chr14,chr14	+,-	MNAT1,SIX1	85544,291
chr3:157222028-157223796	chr3	+	157222301	157223513	True	NM_001167911,NR_024016,NM_001167912,NM_024621,NM_001167917,NM_001167916,NM_001167915	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-,-	VEPH1,C3orf55,VEPH1,VEPH1,VEPH1,VEPH1,VEPH1	-1165,37645,-1165,-4856,-9006,-886,-886
chrX:79827895-79828394	chrX	+	79828045	79828443	True	NM_152630,NM_153252	chrX,chrX	+,-	FAM46D,BRWD3	-152150,236840
chr10:64147419-64148217	chr10	+	64147422	64148262	True	NM_199451,NM_145307	chr10,chr10	+,-	ZNF365,RTKN2	-13557,-118956
chr15:100107111-100107313	chr15	+	100107156	100107342	True	NM_001171894,NM_001130926,NM_001130927,NM_005587,NM_152449	chr15,chr15,chr15,chr15,chr15	+,+,+,+,-	MEF2A,MEF2A,MEF2A,MEF2A,LYSMD4	-1082,-1082,-1082,-1082,166334
chr8:67420879-67421084	chr8	+	67420907	67421039	True	NM_001080416,NM_152765	chr8,chr8	-,+	MYBL1,C8orf46	104491,-15467
chr3:160949624-160951594	chr3	+	160949778	160951571	True	NM_015938,NM_033168	chr3,chr3	+,-	NMD3,B3GALNT1	-10730,-126618
chr3:187547021-187547442	chr3	+	187547057	187547313	True	NR_034062,NM_001706	chr3,chr3	+,-	LOC100131635,BCL6	-126961,-83544
chr1:202683348-202683987	chr1	+	202683828	202684040	True	NR_002929,NM_177402	chr1,chr1	+,-	LOC148709,SYT2	146841,-4277
chr3:197875925-197876409	chr7	-	39159	39528	False	NM_002607,NM_020223	chr7,chr7	-,+	PDGFA,FAM20C	520003,153440
chr3:197875925-197876409	chr3	+	197875945	197876453	True	NR_003291	chr3	-	LOC348840	-68403
chr3:197875925-197876409	chr16	+	90164649	90165018	False	NM_001098173,NR_023348	chr16,chr16	-,+	PRDM7,GAS8	-22311,-75692
chr3:197875925-197876409	chr9	+	141103344	141103853	False	NM_032937	chr9	-	C9orf37	-590036
chr1:3772868-3773164	chr1	+	3772935	3773202	True	NM_004402,NM_014704	chr1,chr1	+,-	DFFB,KIAA0562	642,645
chr5:85585795-85586582	chr5	+	85585956	85586624	True	NR_003719,NR_036243	chr5,chr5	+,-	NBPF22P,MIR4280	-7745,824199
chr19:55455904-55456465	chr19	+	55456046	55456310	True	NM_206828,NM_139176,NM_001174081,NM_001127255	chr19,chr19,chr19,chr19	-,-,+,-	NLRP7,NLRP7,NLRP2,NLRP7	2623,2623,20341,2623
chr1:53307092-53308172	chr1	+	53307281	53308011	True	NM_001198961,NM_001004339	chr1,chr1	-,+	ECHDC2,ZYG11A	79485,171
chr15:51973558-51973823	chr15	+	51973653	51973819	True	NM_013243,NM_153374,NM_001165257	chr15,chr15,chr15	+,-,+	SCG3,LYSMD2,SCG3	-154,56551,-154
chr3:145973099-145974707	chr3	+	145973117	145974465	True	NM_001177304,NM_001128306,NR_033439,NR_033438,NM_003412,NM_020353	chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,+,-	PLSCR4,PLSCR4,PLSCR4,PLSCR4,ZIC1,PLSCR4	-4151,-4151,-4466,-4151,1152715,-4151
chr5:759474-759957	chr5	+	759516	759812	True	NM_001166260,NM_007030	chr5,chr5	+,-	TRIP13,TPPP	133156,-66006
chr19:2256937-2257224	chr19	+	2257127	2257221	True	NR_036207,NM_000479,NM_144616	chr19,chr19,chr19	+,+,-	MIR4321,AMH,JSRP1	-6540,-8065,-705
chr4:5713357-5714840	chr4	+	5713373	5714757	True	NM_147127,NM_001166136,NM_153717	chr4,chr4,chr4	-,-,+	EVC2,EVC2,EVC	-3079,-2098,-500
chr5:131748164-131749925	chr5	+	131748328	131749751	True	NM_001013717,NR_037898	chr5,chr5	+,-	C5orf56,LOC553103	-1706,-42720
chr6:71377948-71378169	chr6	+	71377997	71378217	True	NM_080742,NM_001044305,NM_021940	chr6,chr6,chr6	-,+,+	B3GAT2,SMAP1,SMAP1	288621,-569,-569
chr16:25123343-25124366	chr16	+	25123450	25124198	True	NM_018054,NM_001032391,NM_016309	chr16,chr16,chr16	-,+,+	ARHGAP17,LCMT1,LCMT1	-96775,-454,-454
chr22:50312832-50313268	chr22	+	50312880	50313116	True	NM_024324,NM_024105,NM_001135101	chr22,chr22,chr22	+,-,+	CRELD2,ALG12,CRELD2	-648,-774,-648
chr10:45799744-45800223	chr10	+	45799764	45800201	True	NM_001004297,NM_000698	chr10,chr10	-,+	OR13A1,ALOX5	10918,69427
chr5:142741072-142742191	chr5	+	142741162	142741876	True	NM_021182,NM_000176	chr5,chr5	+,-	HMHB1,NR3C1	449849,41435
chr6:160119227-160119726	chr6	+	160119700	160119784	True	NM_001024466,NM_001024465,NM_152858,NM_000636	chr6,chr6,chr6,chr6	-,-,+,-	SOD2,SOD2,WTAP,SOD2	-5347,-5347,28367,-5347
chr12:71278543-71279473	chr12	+	71278673	71279182	True	NM_002849,NM_014505	chr12,chr12	-,+	PTPRR,KCNMB4	35465,-518662
chr4:85420573-85421045	chr4	+	85420578	85421044	True	NM_001263,NM_006168	chr4,chr4	+,-	CDS1,NKX6-1	83012,-1191
chr10:52839899-52840554	chr10	+	52839916	52840509	True	NM_006258,NM_138933	chr10,chr10	+,-	PRKG1,A1CF	-5740,-194481
chr19:10450195-10451119	chr19	+	10450348	10451037	True	NM_002162,NM_133452,NM_003259	chr19,chr19,chr19	-,-,+	ICAM3,RAVER1,ICAM5	-3,-6034,-49744
chr7:128785069-128785285	chr7	+	128785095	128785239	True	NM_178562,NR_034053	chr7,chr7	+,-	TSPAN33,TNPO3	-434,-89868
chr11:64066904-64067163	chr11	+	64067017	64067091	True	NM_004451,NM_001039496,NM_032989,NM_033310	chr11,chr11,chr11,chr11	+,+,-,+	ESRRA,C11orf20,BAD,KCNK4	5952,771,-14841,-8275
chr16:88877840-88878091	chr16	+	88877918	88878032	True	NM_000485,NM_001030018,NM_030928	chr16,chr16,chr16	-,-,+	APRT,APRT,CDT1	360,360,-7783
chr19:56000970-56001698	chr19	+	56000987	56001597	True	NM_024710,NM_001144950,NM_020378,NM_001195267	chr19,chr19,chr19,chr19	-,+,+,+	ISOC2,SSC5D,NAT14,SSC5D	-27938,-1168,-4481,-1168
chr18:67610145-67611540	chr18	+	67610163	67611568	True	NM_006566,NM_004232	chr18,chr18	-,+	CD226,SOCS6	12714,344568
chr2:44502776-44504540	chr2	+	44503075	44504602	True	NM_001042385,NM_000341	chr2,chr2	-,+	PREPL,SLC3A1	82349,-530
chr17:56085075-56085328	chr17	+	56085170	56085350	True	NR_034041,NM_001078166,NM_006924,NM_080677	chr17,chr17,chr17,chr17	-,-,-,+	SRSF1,SRSF1,SRSF1,DYNLL2	-463,-463,-463,75429
chr17:66255397-66256079	chr17	+	66255619	66256099	True	NM_014960,NM_001174166	chr17,chr17	+,-	ARSG,SLC16A6	-358,31358
chr14:98644804-98645088	chr14	+	98644804	98645104	True	NR_015430,NM_182560	chr14,chr14	-,+	C14orf64,C14orf177	-200343,532845
chr19:53737787-53739379	chr19	+	53737962	53739037	True	NM_182609,NM_173856	chr19,chr19	-,+	ZNF677,VN1R2	19125,22507
chr18:78009509-78010360	chr18	+	78009665	78010320	True	NR_028339	chr18	+	LOC100130522	-103922
chr3:9773020-9773334	chr3	+	9773187	9773367	True	NM_004634,NM_003656,NM_001003694	chr3,chr3,chr3	+,-,+	BRPF1,CAMK1,BRPF1	66,38351,66
chr19:2477892-2478308	chr19	+	2477991	2478295	True	NM_032737,NM_015675	chr19,chr19	-,+	LMNB2,GADD45B	-21033,-1919
chr1:151228241-151228743	chr1	+	151228317	151228377	True	NM_005997,NM_002810	chr1,chr1	-,+	VPS72,PSMD4	-65677,-1177
chr14:96830217-96830438	chr14	+	96830277	96830419	True	NM_018036,NM_016472	chr14,chr14	-,+	ATG2B,C14orf129	-599,15602
chr22:25364411-25365024	chr22	+	25364554	25364710	True	NM_001145206,NM_001001663	chr22,chr22	+,-	KIAA1671,TMEM211	59230,-29240
chr11:112044456-112045144	chr11	+	112044491	112044943	True	NM_001562,NM_031938,NM_001037290,NM_031275	chr11,chr11,chr11,chr11	-,+,+,+	IL18,BCO2,BCO2,TEX12	-9651,1264,2145,-6458
chr12:54427967-54428311	chr12	+	54428051	54428209	True	NM_004503,NM_018953,NR_030753,NR_026658	chr12,chr12,chr12,chr12	+,+,+,-	HOXC6,HOXC5,MIR615,LOC100240735	-5908,-1270,-368,47448
chr14:29236411-29236722	chr14	+	29236473	29236609	True	NM_002742,NR_026731,NR_026732,NM_005249	chr14,chr14,chr14,chr14	-,+,+,+	PRKD1,C14orf23,C14orf23,FOXG1	1160340,5300,5300,-237
chr4:89300371-89300648	chr4	+	89300494	89300635	True	NM_017912,NM_001165136,NM_152542	chr4,chr4,chr4	+,+,-	HERC6,HERC6,PPM1K	-654,-654,-94606
chr2:193637185-193639142	chr2	+	193637581	193638967	True	NR_002769,NM_016192	chr2,chr2	+,-	PCGEM1,TMEFF2	-23075,-577937
chr1:154475986-154477661	chr1	+	154476200	154477622	True	NM_182499,NM_001010846,NM_001098475	chr1,chr1,chr1	+,-,+	TDRD10,SHE,TDRD10	-1556,-1674,-1556
chr6:168842692-168842999	chr6	+	168842774	168843026	True	NM_214462,NM_001166412,NM_022138	chr6,chr6,chr6	-,+,+	DACT2,SMOC2,SMOC2	-122372,-994,-994
chr14:78176841-78178321	chr14	+	78176884	78178375	True	NM_031210,NM_006020	chr14,chr14	+,-	C14orf156,ALKBH1	-2511,-2528
chr17:37760973-37761204	chr17	+	37761071	37761245	True	NM_032192,NM_006160	chr17,chr17	+,-	PPP1R1B,NEUROD2	21933,2980
chr6:165722168-165722762	chr6	+	165722296	165722700	True	NM_144980,NR_027284	chr6,chr6	-,+	C6orf118,LOC441177	461,678338
chr4:128981744-128981964	chr4	+	128981754	128981818	True	NM_032239,NM_018078,NM_178043,NM_152778	chr4,chr4,chr4,chr4	+,+,+,-	LARP1B,LARP1B,LARP1B,MFSD8	684,684,684,-94615
chr15:78220050-78221381	chr15	+	78220389	78221393	True	NM_001101404,NR_027024	chr15,chr15	+,-	SH2D7,LOC645752	163533,-1201
chr6:158654989-158656121	chr6	+	158655066	158655741	True	NM_207118,NM_032861	chr6,chr6	+,-	GTF2H5,SERAC1	-65751,-65754
chr13:53191184-53191528	chr13	+	53191337	53191493	True	NM_001011724,NM_001011725,NM_001011705	chr13,chr13,chr13	+,+,-	HNRNPA1L2,HNRNPA1L2,LECT1	111,111,122504
chr2:27361970-27363149	chr2	+	27362001	27362739	True	NM_175769,NM_178553,NM_013388	chr2,chr2,chr2	+,-,-	TCF23,C2orf53,PREB	9205,15,-4459
chr6:116330263-116331110	chr6	+	116330355	116331037	True	NM_002031,NR_027338	chr6,chr6	-,+	FRK,TPI1P3	50948,28856
chr5:80511383-80512602	chr5	+	80511385	80512555	True	NR_034121,NR_002754,NR_002755	chr5,chr5,chr5	-,+,+	LOC100131067,RNU5E,RNU5D	84883,-9979,-9978
chr2:85554832-85555710	chr2	+	85555070	85555734	True	NM_001135021,NM_006464	chr2,chr2	+,-	ELMOD3,TGOLN2	26108,-64
chrX:47700655-47701609	chrX	+	47700792	47701658	True	NM_007137,NM_001007088	chrX,chrX	+,-	ZNF81,ZNF182	-4542,161769
chr11:117047930-117048929	chr11	+	117048558	117048972	True	NM_001040455,NM_004716	chr11,chr11	+,-	SIDT2,PCSK7	966,53889
chrX:69478363-69478980	chrX	+	69478367	69478923	True	NM_004312,NM_002565	chrX,chrX	+,-	ARR3,P2RY4	9261,781
chr21:30396331-30396761	chr21	+	30396596	30396810	True	NM_016940,NM_001001992,NM_001032410,NM_006447	chr21,chr21,chr21,chr21	-,+,+,+	RWDD2B,USP16,USP16,USP16	-4911,127,127,127
chr18:14747319-14747814	chr18	+	14747540	14747860	True	NM_001145029,NM_001137671	chr18,chr18	+,-	ANKRD30B,POTEC	378,-203941
chr3:196366189-196366404	chr3	+	196366232	196366352	True	NM_198565,NM_182627	chr3,chr3	+,-	LRRC33,WDR53	303,-70819
chr9:95054756-95055863	chr9	+	95054797	95055770	True	NR_003704,NM_002161,NR_037424,NM_013417,NM_001012267	chr9,chr9,chr9,chr9,chr9	-,-,-,-,+	SNORA84,IARS,MIR3651,IARS,CENPP	-4,319,32,253,31970
chr11:113569709-113570342	chr11	+	113569712	113570262	True	NM_001101389,NM_030770	chr11,chr11	+,-	CLDN25,TMPRSS5	80255,6856
chr5:157098434-157098820	chr5	+	157098604	157098868	True	NM_001145132,NM_178424	chr5,chr5	+,-	C5orf52,SOX30	-94,-19176
chr1:205475334-205475841	chr1	+	205475339	205475889	True	NM_212503,NM_002596,NR_027086,NM_212502	chr1,chr1,chr1,chr1	+,+,-,+	CDK18,CDK18,LOC284578,CDK18	-1706,-1706,49924,-1706
chr8:59323459-59323805	chr8	+	59323509	59323749	True	NM_000780,NM_001077619	chr8,chr8	-,+	CYP7A1,UBXN2B	89021,73
chr17:12568129-12568790	chr17	+	12568133	12568643	True	NM_001146312,NM_153604,NM_001165962	chr17,chr17,chr17	+,+,-	MYOCD,MYOCD,ELAC2	563,563,352788
chr10:118083828-118084258	chr10	+	118083910	118084286	True	NM_005264,NM_198515	chr10,chr10	-,+	GFRA1,C10orf96	-50784,-21
chr17:15168097-15168470	chr17	+	15168215	15168455	True	NM_153321,NR_033371,NM_000304,NM_153322	chr17,chr17,chr17,chr17	-,+,-,-	PMP22,CDRT7,PMP22,PMP22	-2326,-233974,239,-4122
chr17:12632209-12634106	chr17	+	12632344	12634133	True	NM_001146313,NM_001165962	chr17,chr17	+,-	MYOCD,ELAC2	-8789,287298
chr12:65515107-65515392	chr12	+	65515227	65515341	True	NM_001167614,NM_007191	chr12,chr12	+,-	LEMD3,WIF1	48009,55
chr11:64002752-64003269	chr11	+	64002770	64003318	True	NM_031472,NM_057092,NM_001160389,NM_001033678,NM_032344,NM_005528,NM_001160390,NM_003377,NM_001160392,NM_001160393,NM_004470,NM_001128613,NM_001128612,NM_001135208	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,+,-,-,+,+,-,+,-,-,+,+,+,+	TRPT1,FKBP2,TRPT1,TRPT1,NUDT22,DNAJC4,TRPT1,VEGFB,TRPT1,TRPT1,FKBP2,NUDT22,NUDT22,FKBP2	-9044,6269,-9044,-9044,-9083,-5068,-9044,-555,-9044,-9429,5094,-9083,-9083,5285
chr14:24897578-24897994	chr14	+	24897689	24897907	True	NM_001039771,NM_015299	chr14,chr14	-,+	CBLN3,KHNYN	874,1233
chr1:28880116-28880564	chr1	+	28880135	28880422	True	NM_017846,NR_003109,NR_003077	chr1,chr1,chr1	+,+,-	TRNAU1AP,TRNAU1AP,SNORD99	-657,-657,24963
chr12:69327147-69327360	chr12	+	69327161	69327359	True	NM_001005502,NM_198320,NM_002392	chr12,chr12,chr12	-,-,+	CPM,CPM,MDM2	-182,-182,-125241
chr8:57227069-57228204	chr8	+	57227077	57228180	True	NM_138969,NM_024300	chr8,chr8	-,+	SDR16C5,CHCHD7	5111,-102813
chrX:154842716-154843358	chrX	+	154842721	154843402	True	NM_018196,NM_005840	chrX,chrX	-,+	TMLHE,SPRY3	-99,154048
chr4:2468358-2468871	chr4	+	2468399	2468816	True	NM_001172657,NM_001185010,NM_002938,NM_001185009	chr4,chr4,chr4,chr4	-,+,+,+	ZFYVE28,RNF4,RNF4,RNF4	-48029,1978,1978,2363
chr12:108955484-108955775	chr12	+	108955483	108955759	True	NM_213595,NM_014301,NM_014706	chr12,chr12,chr12	+,+,-	ISCU,ISCU,SART3	534,534,-318
chr9:111881729-111882020	chr9	+	111881767	111882069	True	NM_032012,NM_017832	chr9,chr9	-,+	C9orf5,C9orf6	206,-185145
chr6:152956588-152957255	chr6	+	152956650	152957254	True	NM_025107,NM_182961,NM_033071	chr6,chr6,chr6	+,-,-	MYCT1,SYNE1,SYNE1	61775,1330,782
chr19:59065942-59066201	chr19	+	59066004	59066212	True	NM_198426,NR_027334,NM_003969,NM_014453	chr19,chr19,chr19,chr19	-,+,-,-	CHMP2A,LOC100131691,UBE2M,CHMP2A	193,4340,4181,324
chr19:41303899-41304236	chr19	+	41304010	41304258	True	NM_053046,NM_198476,NM_080732	chr19,chr19,chr19	+,-,+	EGLN2,C19orf54,EGLN2	1075,-48182,789
chr1:32280804-32281532	chr1	+	32280826	32281476	True	NM_144569,NM_001525,NM_006559	chr1,chr1,chr1	-,+,+	SPOCD1,HCRTR1,KHDRBS1	154,-197576,198014
chr16:77760907-77762618	chr16	+	77761124	77762638	True	NR_024154,NM_001105663,NM_199355	chr16,chr16,chr16	+,+,-	NUDT7,NUDT7,ADAMTS18	-4770,-4770,-292113
chr6:35438255-35438475	chr6	+	35438291	35438391	True	NM_003214,NM_007104	chr6,chr6	-,+	TEAD3,RPL10A	26520,-2164
chr7:72474444-72475280	chr7	+	72474751	72475013	True	NM_001013739,NR_003614	chr7,chr7	-,+	STAG3L3,PMS2L2	1500,1666
chr7:72474444-72475280	chr7	+	74305024	74305278	False	NR_027777,NR_027776,NM_001025202,NR_027775	chr7,chr7,chr7,chr7	+,+,-,+	PMS2P5,PMS2P5,STAG3L2,PMS2P5	1615,1615,1511,1615
chr7:72474444-72475280	chr7	-	74989883	74990145	False	NR_003614,NM_001002840,NM_018991	chr7,chr7,chr7	-,+,+	PMS2L2,STAG3L1,STAG3L1	-1668,-1495,-1495
chr5:145217046-145217930	chr5	+	145217179	145217965	True	NM_205846,NM_182960,NM_138492,NM_152550	chr5,chr5,chr5,chr5	-,-,-,+	PRELID2,PRELID2,PRELID2,SH3RF2	-2312,-2312,-2280,98160
chr2:74695221-74695838	chr2	+	74695685	74695753	True	NM_001146158,NM_006302,NM_012477,NM_053050	chr2,chr2,chr2,chr2	-,-,+,-	MOGS,MOGS,WBP1,MRPL53	-3148,-3148,-10221,4247
chr20:33143939-33145655	chr20	+	33144023	33145234	True	NM_080476,NM_032514,NM_181509	chr20,chr20,chr20	-,+,+	PIGU,MAP1LC3A,MAP1LC3A	119908,1284,-9382
chr19:3772243-3772749	chr19	+	3772694	3772754	True	NM_032753,NM_172251	chr19,chr19	-,+	RAX2,MRPL54	-475,-10080
chr5:58883927-58884317	chr5	+	58883929	58884341	True	NM_006203,NR_024617	chr5,chr5	-,+	PDE4D,PART1	-1605,899198
chr17:38720219-38720918	chr17	+	38720372	38720921	True	NM_001552,NM_001838	chr17,chr17	+,-	IGFBP4,CCR7	-120747,866
chr5:16509450-16509957	chr5	+	16509449	16509803	True	NM_019000,NM_006317	chr5,chr5	-,+	FAM134B,BASP1	-418,707946
chrX:131155785-131156906	chrX	+	131155812	131156592	True	NM_001042452,NM_001042453,NM_194277,NM_016542	chrX,chrX,chrX,chrX	+,+,-,+	MST4,MST4,FRMD7,MST4	1043,652,105515,652
chrX:135076422-135077640	chrX	+	135076572	135077423	True	NM_173470,NM_006359,NM_001177651,NM_001042537	chrX,chrX,chrX,chrX	-,+,+,+	MMGT1,SLC9A6,SLC9A6,SLC9A6	-20438,-9039,-9042,-9039
chr4:188893268-188895236	chr4	+	188893489	188895225	True	NM_173553,NM_174900	chr4,chr4	-,+	TRIML2,ZFP42	131242,21699
chr7:141403535-141404196	chr7	+	141403556	141404204	True	NM_001080392,NM_001105558	chr7,chr7	-,+	KIAA1147,WEE2	-1603,3948
chr1:245007245-245007914	chr1	+	245007378	245007766	True	NR_026778,NM_198076	chr1,chr1	-,+	NCRNA00201,FAM36A	2539,-8792
chr8:27348697-27348919	chr8	+	27348710	27348958	True	NM_001979,NM_000742	chr8,chr8	+,-	EPHX2,CHRNA2	-116,-11897
chr1:118146680-118148045	chr1	+	118147168	118147905	True	NM_017686,NM_017709	chr1,chr1	-,+	GDAP2,FAM46C	324448,698
chr16:23161007-23161309	chr16	+	23161049	23161343	True	NM_001039,NM_020718	chr16,chr16	+,-	SCNN1G,USP31	32696,-458
chr5:34042609-34043798	chr5	+	34042734	34043761	True	NM_030945,NM_016568,NM_181435	chr5,chr5,chr5	-,+,-	C1QTNF3,RXFP3,C1QTNF3	-71,-106295,-71
chr19:841108-841818	chr19	+	841254	841376	True	NM_002777,NM_024888	chr19,chr19	+,-	PRTN3,LPPR3	-320,-19302
chr11:131241864-131242882	chr11	+	131241968	131242892	True	NM_001048209,NM_014758	chr11,chr11	+,-	NTM,SNX19	-1648,-455586
chr6:33282711-33282912	chr6_qbl_hap6	+	4514961	4515089	False	NM_001145338,NM_001350,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	2927,8003,8003,-25357,2720,-551,-551,-551,8003
chr6:33282711-33282912	chr6_mcf_hap5	+	4756457	4756585	False	NM_001145338,NM_001350,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	2927,8000,8000,-25352,2720,-551,-551,-551,8000
chr6:33282711-33282912	chr6_cox_hap2	+	4726527	4726655	False	NM_001145338,NM_001350,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	2929,8006,8006,-25352,2722,-551,-551,-551,8006
chr6:33282711-33282912	chr6	+	33282715	33282843	True	NM_001145338,NM_001350,NR_024517,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	2926,8000,8000,8000,-25354,2719,-551,-551,-551,8000
chr6:33282711-33282912	chr6_dbb_hap3	+	4564038	4564166	False	NM_001145338,NM_001350,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	2927,8004,8004,-25351,2720,-551,-551,-551,8004
chr2:120539849-120540440	chr2	+	120540039	120540239	True	NM_002980,NM_002830	chr2,chr2	-,+	SCTR,PTPN4	-258011,-22898
chr2:219188553-219189580	chr2	+	219188570	219189353	True	NM_022572,NM_022152	chr2,chr2	+,-	PNKD,TMBIM1	-719,-31290
chr15:34784697-34785071	chr15	+	34784765	34785004	True	NM_175741,NR_036050	chr15,chr15	+,-	C15orf55,MIR1233-1	-146758,35631
chr7:76027220-76027712	chr7	+	76027373	76027619	True	NM_080744,NM_007155	chr7,chr7	-,+	SRCRB4D,ZP3	11443,-583
chr4:154654028-154654905	chr4	+	154654028	154654948	True	NM_173662,NM_003264	chr4,chr4	-,+	RNF175,TLR2	26500,-48638
chr19:56688734-56689099	chr19	+	56689020	56689124	True	NM_001145546,NM_001080456,NM_033106	chr19,chr19,chr19	+,-,+	GALP,ZSCAN5B,GALP	-1682,15347,-1682
chr7:138792403-138793147	chr7	+	138792537	138793123	True	NM_024625,NM_001144920,NM_020119	chr7,chr7,chr7	-,+,-	ZC3HAV1,TTC26,ZC3HAV1	1392,25366,1392
chr3:63095749-63096930	chr3	+	63095798	63096920	True	NM_183394,NR_027104	chr3,chr3	-,+	CADPS,LOC285401	-234734,-7485
chr11:6023760-6025551	chr11	+	6023785	6025291	True	NM_001005179,NM_001003443	chr11,chr11	-,+	OR56A4,OR56A3	87,-55259
chr3:17728560-17730075	chr3	+	17728901	17730079	True	NM_001134381,NR_037465	chr3,chr3	-,+	TBC1D5,MIR3714	11484,-754271
chr7:73496585-73497292	chr7	+	73496788	73497308	True	NM_002314,NM_002914	chr7,chr7	+,-	LIMK1,RFC2	798,171480
chr13:76205253-76207188	chr13	+	76205472	76206925	True	NM_005358,NM_203497	chr13,chr13	+,-	LMO7,COMMD6	-10966,-93481
chr8:7934321-7934727	chr8	+	7934320	7934438	True	NR_031689,NR_027424	chr8,chr8	-,+	MIR548I3,FAM66E	12223,-121836
chr8:7934321-7934727	chr8	-	12447641	12447733	False	NR_037492,NR_037495	chr8,chr8	-,+	MIR3926-1,MIR3926-2	137130,137012
chr8:7934321-7934727	chr8	-	7068145	7068195	False	NR_027000,NM_001164452	chr8,chr8	-,+	LOC349196,FAM90A14	52869,46230
chr8:7934321-7934727	chr8	-	7526730	7526780	False	NM_001136572,NM_001164452	chr8,chr8	-,+	FAM90A7,FAM90A14	-86555,46184
chr1:151162576-151163023	chr1	+	151162638	151162868	True	NM_001135637,NM_001135636,NM_003557,NM_005997,NM_001135638	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	PIP5K1A,PIP5K1A,PIP5K1A,VPS72,PIP5K1A	8152,8152,8152,2,8152
chr12:53577310-53577662	chr12	+	53577310	53577524	True	NM_001004304,NM_015989	chr12,chr12	+,-	ZNF740,CSAD	-2830,-2880
chr12:49757604-49758117	chr12	+	49757738	49758124	True	NM_001008223,NM_023071	chr12,chr12	-,+	C1QL4,SPATS2	-26767,2563
chr5:31796483-31797125	chr5	+	31796561	31796897	True	NR_036241,NM_178140	chr5,chr5	-,+	MIR4279,PDZD2	139428,2133
chr15:66547711-66549133	chr15	+	66548004	66549087	True	NM_133375,NM_032445	chr15,chr15	+,-	DIS3L,MEGF11	36545,-1929
chr12:120031674-120031879	chr12	+	120031677	120031859	True	NR_031589,NM_001136534	chr12,chr12	-,+	MIR1178,TMEM233	119720,-464
chr7:23628184-23629329	chr7	+	23628461	23629014	True	NM_138771,NR_002711	chr7,chr7	+,-	CCDC126,CLK2P	7983,-2315
chr22:42372234-42372453	chr22	+	42372242	42372448	True	NM_024053,NM_145733,NM_019106	chr22,chr22,chr22	-,+,+	CENPM,SEPT3,SEPT3	-29094,482,482
chr2:24843327-24844506	chr2	+	24843726	24844254	True	NM_147233,NM_001013663	chr2,chr2	+,-	NCOA1,C2orf79	-36442,172054
chr1:23693619-23694412	chr1	+	23693638	23694386	True	NR_033691,NR_033690,NM_001077195,NM_030634	chr1,chr1,chr1,chr1	+,+,-,-	C1orf213,C1orf213,ZNF436,ZNF436	1324,1077,2021,543
chr19:3868925-3869877	chr19	+	3868956	3869597	True	NM_001145640,NM_033064,NM_015174,NR_027149	chr19,chr19,chr19,chr19	-,+,-,-	ZFR2,ATCAY,ZFR2,ZFR2	51,11020,51,51
chr7:111992796-111993975	chr7	+	111992802	111993992	True	NM_001007245,NM_014705	chr7,chr7	+,-	IFRD1,DOCK4	69206,-146340
chr12:50673081-50673345	chr12	+	50673231	50673357	True	NM_016357,NM_001170804,NM_001113546	chr12,chr12,chr12	-,+,-	LIMA1,LARP4,LIMA1	4046,121234,4046
chr12:10364836-10365507	chr12	+	10364860	10365381	True	NM_031412,NM_002543	chr12,chr12	+,-	GABARAPL1,OLR1	107,-40070
chr19:39935698-39935978	chr19	+	39935761	39936013	True	NM_001111020,NM_003169,NM_001130825,NM_001130824,NM_001020	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	SUPT5H,SUPT5H,SUPT5H,SUPT5H,RPS16	172,274,172,172,-9143
chr15:25459698-25460183	chr15	+	25459775	25460093	True	NR_003315,NR_003314,NR_003313,NR_003495,NR_003496,NR_003497,NR_022010,NR_003358,NR_003344,NR_003351,NM_130838,NR_003342,NR_003343,NR_003303,NR_003307,NR_003312	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,+,-,+,+,+,+,+	SNORD115-23,SNORD115-22,SNORD115-21,SNORD115-24,HBII-52-27,HBII-52-28,PAR4,SNORD115-43,SNORD115-29,SNORD115-36,UBE3A,SNORD115-25,SNORD115-26,SNORD115-11,SNORD115-15,SNORD115-20	-2883,-4761,-8417,-1020,5556,7407,-2987,8299,8299,8299,190610,594,3670,8299,-8417,-8417
chr9:20652542-20653535	chr9	+	20652937	20653248	True	NM_004529,NM_017794	chr9,chr9	-,+	MLLT3,KIAA1797	-30423,5060
chr1:236768605-236768935	chr1	+	236768709	236768979	True	NM_018072,NM_001103	chr1,chr1	-,+	HEATR1,ACTN2	-868,80790
chr12:123717448-123717701	chr12	+	123717607	123717693	True	NM_001143905,NM_001194995,NM_022782,NM_152269	chr12,chr12,chr12,chr12	+,+,-,+	C12orf65,C12orf65,MPHOSPH9,C12orf65	597,334,-11166,150
chr17:38442538-38443877	chr17	+	38442728	38443852	True	NM_001254,NM_152219	chr17,chr17	+,-	CDC6,GJD3	293,77143
chr2:23680996-23682191	chr2	+	23681022	23682037	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	467954,-72775
chr19:56922651-56923232	chr19	+	56922786	56923195	True	NM_001159860,NM_001159861,NM_152478,NM_144690	chr19,chr19,chr19,chr19	+,+,+,-	ZNF583,ZNF583,ZNF583,ZNF582	-7464,-7129,-7153,-17897
chr12:124454284-124455128	chr12	+	124454316	124455152	True	NM_152437,NM_025140,NM_001204298,NM_001204299	chr12,chr12,chr12,chr12	+,-,+,+	ZNF664,CCDC92,ZNF664,ZNF664-FAM101A	2609,2061,2609,2609
chr20:62666390-62666610	chr20	+	62666448	62666578	True	NR_027687,NR_027686,NM_018419	chr20,chr20,chr20	+,+,-	NCRNA00176,NCRNA00176,SOX18	-802,-802,14451
chr12:10156369-10156851	chr12	+	10156532	10156678	True	NM_016509,NM_001099431,NM_001129998,NM_205852	chr12,chr12,chr12,chr12	-,-,+,+	CLEC1B,CLEC1B,CLEC12B,CLEC12B	-4633,-4633,6552,6552
chr1:57285276-57285620	chr1	+	57285348	57285602	True	NM_000562,NM_001004303	chr1,chr1	+,-	C8A,C1orf168	34840,21
chr2:31440368-31442153	chr2	+	31440390	31442058	True	NM_014600,NM_001145122	chr2,chr2	+,-	EHD3,CAPN14	14821,21
chr9:71650370-71650688	chr9	+	71650405	71650596	True	NM_001161706,NM_000144,NM_181425,NM_002732	chr9,chr9,chr9,chr9	+,+,+,-	FXN,FXN,FXN,PRKACG	23,23,23,-21366
chr6:108610949-108612620	chr6	+	108611272	108612373	True	NM_145315,NM_152827	chr6,chr6	+,-	LACE1,SNX3	3724,-28808
chr1:28583334-28584209	chr1	+	28583544	28584050	True	NM_031459,NM_014280	chr1,chr1	+,-	SESN2,DNAJC8	1912,-24002
chrY:2810534-2811596	chrY	+	2810938	2811298	True	NM_003411,NM_001145275,NM_001145276,NM_003140	chrY,chrY,chrY,chrY	+,+,+,-	ZFY,ZFY,ZFY,SRY	-7479,-7479,-7885,-155146
chr6:14115067-14116407	chr6	+	14115219	14116281	True	NM_001031713,NM_001040280,NM_004233	chr6,chr6,chr6	-,+,+	CCDC90A,CD83,CD83	-300430,1583,1583
chr4:88565356-88567246	chr4	+	88565608	88567226	True	NM_001079911,NM_004407,NM_004684	chr4,chr4,chr4	+,+,-	DMP1,DMP1,SPARCL1	4227,4227,-114953
chr4:111542964-111543216	chr4	+	111542989	111543207	True	NM_001977,NM_000325	chr4,chr4	+,-	ENPEP,PITX2	-145811,1097
chr19:52955747-52956769	chr19	+	52956067	52956656	True	NM_001099694,NM_001105549	chr19,chr19	+,-	ZNF578,ZNF83	172,185038
chr9:130185299-130185818	chr9	+	130185468	130185842	True	NM_007135,NR_002449	chr9,chr9	+,-	ZNF79,SNORA65	810,25124
chr12:58168185-58168604	chr12	+	58168284	58168540	True	NM_000785,NM_005371,NM_023033,NM_015433,NM_001172695,NM_001172696,NM_001172697,NM_206914,NM_005726	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,-,-,+,+,+,+,+,+	CYP27B1,METTL1,METTL1,METTL21B,TSFM,TSFM,TSFM,METTL21B,TSFM	-7308,-2370,-2370,-1960,7987,7987,7987,-1960,7987
chrX:28616904-28617244	chrX	+	28617030	28617258	True	NM_014271,NM_001017930	chrX,chrX	+,-	IL1RAPL1,DCAF8L1	-11400,-617464
chr1:198634309-198635171	chr1	+	198634531	198635132	True	NM_080921,NM_133326	chr1,chr1	+,-	PTPRC,ATP6V1G3	-26446,-124456
chr2:239198510-239198842	chr2	+	239198548	239198816	True	NM_001139490,NM_022817	chr2,chr2	+,-	TRAF3IP1,PER2	30368,-1341
chr2:42795240-42795636	chr2	+	42795247	42795339	True	NM_172344,NM_020744	chr2,chr2	-,+	KCNG3,MTA3	-74010,331
chr5:75914200-75915432	chr5	+	75914211	75915159	True	NR_028375,NM_004101	chr5,chr5	+,-	NCRUPAR,F2RL2	92603,4131
chr3:54667896-54669436	chr3	+	54667904	54668355	True	NR_027122,NM_018398	chr3,chr3	-,+	ESRG,CACNA2D3	5586,-511262
chr13:49833557-49834152	chr13	+	49833557	49834051	True	NM_030925,NR_036439	chr13,chr13	-,+	CAB39L,CDADC1	141734,-11568
chr1:12819016-12819325	chr1	+	12819049	12819343	True	NM_001146344,NM_152290	chr1,chr1	-,+	PRAMEF11,C1orf158	71971,-12937
chr16:67839963-67840328	chr16	+	67839973	67840339	True	NM_018430,NM_020850	chr16,chr16	+,-	TSNAXIP1,RANBP10	670,266
chr1:9146407-9147354	chr1	+	9146794	9147184	True	NM_001215,NR_024180	chr1,chr1	+,-	CA6,SLC2A5	-140925,1376
chr1:47572314-47573623	chr1	+	47572444	47573611	True	NM_005764,NM_001010969	chr1,chr1	-,+	PDZK1IP1,CYP4A22	82210,29495
chr10:118955499-118955767	chr10	+	118955530	118955818	True	NR_037436,NM_181840	chr10,chr10	-,+	MIR3663,KCNK18	-28245,1181
chr2:166159944-166160811	chr2	+	166160108	166160557	True	NM_006922,NM_001040143,NM_021007	chr2,chr2,chr2	-,+,+	SCN3A,SCN2A,SCN2A	-99531,-7887,-9829
chr19:4306836-4307455	chr19	+	4306869	4307061	True	NM_024333,NM_001169126,NM_144615	chr19,chr19,chr19	+,-,-	FSD1,TMIGD2,TMIGD2	-2329,-4441,-4441
chr19:21541167-21541770	chr19	+	21541334	21541808	True	NR_027130,NM_021269	chr19,chr19	+,-	ZNF738,ZNF708	54,-29122
chr7:122338309-122339529	chr7	+	122338485	122339567	True	NM_198085,NM_139175,NR_036484	chr7,chr7,chr7	-,-,+	RNF148,RNF133,LOC154860	3504,-13,-394833
chr11:7041554-7043089	chr11	+	7041567	7043115	True	NM_013249,NM_176822	chr11,chr11	-,+	ZNF214,NLRP14	19,82
chr3:129323939-129324161	chr3	+	129323948	129324203	True	NM_153833,NM_015103	chr3,chr3	+,-	H1FOO,PLXND1	-61942,1429
chr6:134272189-134273119	chr6	+	134272257	134273145	True	NM_004865,NM_145176	chr6,chr6	+,-	TBPL1,SLC2A12	1155,100694
chr11:65646551-65647046	chr11	+	65646568	65646844	True	NR_037718,NM_198897,NM_004214,NM_016938,NM_001335	chr11,chr11,chr11,chr11,chr11	-,-,-,-,+	EFEMP2,FIBP,FIBP,EFEMP2,CTSW	-6163,9216,9216,-6163,439
chr7:76677162-76677800	chr7	+	76677587	76677657	True	NM_006682,NR_028058	chr7,chr7	-,+	FGL2,LOC100132832	151543,-8841
chr14:102976599-102976839	chr14	+	102976702	102976768	True	NM_152326,NR_036192	chr14,chr14	-,+	ANKRD9,MIR4309	-574,29212
chr1:187043613-187043821	chr1	+	187043682	187043840	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-394123,-245701
chr19:48543831-48544153	chr19	+	48543847	48544124	True	NM_022142,NM_019855	chr19,chr19	+,-	ELSPBP1,CABP5	-45990,3237
chr15:68570961-68572858	chr15	+	68571230	68572613	True	NM_017882,NM_015322	chr15,chr15	-,+	CLN6,FEM1B	-49150,-1141
chr2:91757407-91757824	chr10	+	43361966	43362034	True	NM_014753,NM_006955	chr10,chr10	+,-	BMS1,ZNF33B	-84081,-227974
chr2:91757407-91757824	chr2	+	91757484	91757720	False	NR_003503,NR_027238	chr2,chr2	+,-	GGT8P,LOC654342	205647,90305
chr7:143318212-143318413	chr7	+	143318230	143318440	True	NM_178561,NM_001130025,NM_173678	chr7,chr7,chr7	-,+,+	CTAGE6P,FAM115C,FAM115C	136453,-237,101
chr7:143318212-143318413	chr7	-	143533405	143533615	False	NR_015421,NM_001004685	chr7,chr7	-,+	LOC154761,OR2F2	246,98710
chr16:84176329-84177321	chr16	+	84176334	84177324	True	NM_031463,NM_001146051,NM_178452	chr16,chr16,chr16	-,-,+	HSDL1,HSDL1,LRRC50	1526,1526,1540
chr1:110702884-110703401	chr1	+	110702948	110703306	True	NM_006492,NM_001010898	chr1,chr1	-,+	ALX3,SLC6A17	-89626,-9867
chr16:67384795-67385004	chr16	+	67384961	67385033	True	NM_001100915,NM_001161575	chr16,chr16	-,+	KCTD19,LRRC36	-24300,-3758
chr2:47051387-47052251	chr2	+	47051491	47052279	True	NR_034099,NR_024452,NM_001171506	chr2,chr2,chr2	+,+,-	LOC388948,LOC100134259,MCFD2	-7743,2723,90778
chr13:77165693-77166744	chr13	+	77166030	77166790	True	NR_026983,NM_138444	chr13,chr13	+,-	BTF3P11,KCTD12	335794,293800
chr19:48963793-48964909	chr19	+	48963855	48964136	True	NM_013348,NM_017457,NM_004228,NM_001080434,NM_170720	chr19,chr19,chr19,chr19,chr19	+,+,+,-,+	KCNJ14,CYTH2,CYTH2,LMTK3,KCNJ14	-5154,8328,8328,52367,369
chr2:24820819-24822758	chr2	+	24821017	24822423	True	NM_147233,NM_001013663	chr2,chr2	+,-	NCOA1,C2orf79	-13724,193887
chr9:130831468-130832287	chr9	+	130831484	130832000	True	NM_197956,NM_001006641	chr9,chr9	-,+	NAIF1,SLC25A25	-1885,-1056
chr6:90528450-90529193	chr6	+	90528547	90529072	True	NM_001137667,NM_014611	chr6,chr6	+,-	CASP8AP2,MDN1	10546,420
chr12:21664318-21665726	chr12	+	21664521	21665734	True	NM_016072,NM_002907,NM_032941	chr12,chr12,chr12	+,-,-	GOLT1B,RECQL,RECQL	-9882,-9918,-9918
chr3:45638444-45639551	chr3	+	45638858	45639378	True	NM_014240,NR_033947	chr3,chr3	+,-	LIMD1,LOC644714	-2586,91046
chr17:26372776-26372980	chr17	+	26372775	26372985	True	NM_001076680,NM_016231	chr17,chr17	-,+	C17orf108,NLK	-152366,-3141
chr17:77815106-77815348	chr17	+	77815130	77815338	True	NM_005189,NM_003655	chr17,chr17	+,-	CBX2,CBX4	-63204,-1917
chr19:12035138-12035491	chr19	+	12035279	12035411	True	NM_144566,NM_001080411	chr19,chr19	+,-	ZNF700,ZNF433	488,111170
chr3:11040102-11041739	chr3	+	11040224	11041732	True	NM_003042,NR_027102	chr3,chr3	+,-	SLC6A1,LOC285370	-5856,-234347
chr7:44246269-44247257	chr7	+	44246283	44247202	True	NM_006555,NM_000162	chr7,chr7	+,-	YKT6,GCK	-5756,-17261
chr16:58329305-58329917	chr16	+	58329392	58329894	True	NM_014157,NM_001080492	chr16,chr16	+,-	CCDC113,PRSS54	-45603,-441
chrX:140097152-140097603	chrX	+	140097493	140097647	True	NM_032461,NR_031725,NM_145664,NM_139019	chrX,chrX,chrX,chrX	+,-,+,+	SPANXB1,MIR320D2,SPANXB2,SPANXF1	-783,-89109,-783,-783
chrX:140097152-140097603	chrX	-	140672034	140672092	False	NM_013453,NM_145662	chrX,chrX	-,-	SPANXA1,SPANXA2	794,818
chrX:140097152-140097603	chrX	+	140678602	140678660	False	NM_013453,NM_145662	chrX,chrX	+,+	SPANXA1,SPANXA2	-794,-818
chrX:140097152-140097603	chrX	-	140335824	140335892	False	NM_022661,NM_145664	chrX,chrX	-,+	SPANXC,SPANXB2	804,-239114
chrX:140097152-140097603	chrX	+	140085488	140085642	False	NM_032461,NR_031725,NM_145664,NM_139019	chrX,chrX,chrX,chrX	+,-,+,+	SPANXB1,MIR320D2,SPANXB2,SPANXF1	-783,-77104,-783,-783
chr6:35269690-35271493	chr6	+	35269819	35271481	True	NM_018679,NM_022047	chr6,chr6	-,+	TCP11,DEF6	-160632,-4276
chr19:20151869-20152291	chr19	+	20152065	20152266	True	NM_033196,NM_007138,NM_001077349	chr19,chr19,chr19	-,+,-	ZNF682,ZNF90,ZNF682	-1788,36536,-2001
chr8:17654329-17655178	chr8	+	17654974	17655099	True	NM_006197,NM_001001925,NM_001001924	chr8,chr8,chr8	+,-,-	PCM1,MTUS1,MTUS1	125266,3378,3378
chr22:29664838-29665262	chr22	+	29664989	29665293	True	NM_012265,NM_005243,NM_013986,NM_001163285,NM_001163287,NM_001163286	chr22,chr22,chr22,chr22,chr22,chr22	-,+,+,+,+,+	RHBDD3,EWSR1,EWSR1,EWSR1,EWSR1,EWSR1	-1075,-1043,-1043,-1043,-1043,-1043
chr7:149474378-149474624	chr7	+	149474443	149474607	True	NM_207336,NM_198455	chr7,chr7	-,+	ZNF467,SSPO	-4148,-1363
chr12:54428932-54430580	chr12	+	54429033	54430605	True	NM_004503,NM_018953,NR_030753,NR_026658	chr12,chr12,chr12,chr12	+,+,+,-	HOXC6,HOXC5,MIR615,LOC100240735	-6890,-2252,-1350,45052
chr11:8286475-8287241	chr11	+	8286585	8287175	True	NM_002315,NM_177972	chr11,chr11	-,+	LMO1,TUB	-1179,-183727
chr17:4675628-4675949	chr17	+	4675666	4675974	True	NM_001144939,NM_003963	chr17,chr17	-,+	VMO1,TM4SF5	13805,-530
chr5:217637-218044	chr5	+	217639	218045	True	NM_004168,NM_145265	chr5,chr5	+,-	SDHA,CCDC127	310,304
chr5:217637-218044	chr5	-	1597468	1597518	False	NR_003263,NM_004553	chr5,chr5	-,+	SDHAP3,NDUFS6	-2822,203977
chr16:1831913-1832133	chr16	+	1831990	1832102	True	NM_080861,NM_012225,NM_023936,NM_001010865	chr16,chr16,chr16,chr16	-,+,-,+	SPSB3,NUBP2,MRPS34,EME2	529,830,-8850,-8812
chr20:19264289-19266248	chr20	+	19264437	19266267	True	NR_024564,NM_020689	chr20,chr20	-,+	LOC100130264,SLC24A3	125,-71198
chr10:17687181-17688301	chr10	+	17687196	17688232	True	NM_003473,NM_014241,NR_037774	chr10,chr10,chr10	+,-,+	STAM,PTPLA,STAM	-1124,-27823,-1124
chr1:244514141-244515202	chr1	+	244514517	244515065	True	NM_001012970,NM_001126	chr1,chr1	+,-	C1orf100,ADSS	871,100421
chr11:12030998-12031746	chr11	+	12031250	12031704	True	NM_013253,NM_014632,NM_015881,NM_001018057	chr11,chr11,chr11,chr11	-,+,-,-	DKK3,MICAL2,DKK3,DKK3	-333,100433,-621,-1064
chr19:58662593-58663660	chr19	+	58663018	58663578	True	NM_024620,NM_133502	chr19,chr19	-,+	ZNF329,ZNF274	-870,30817
chr15:41218735-41219278	chr15	+	41218916	41219324	True	NM_019074,NM_133639	chr15,chr15	+,-	DLL4,RHOV	2206,-52429
chr13:114540839-114541104	chr13	+	114540951	114541129	True	NM_001143945,NM_001143946,NR_024609	chr13,chr13,chr13	-,-,+	GAS6,GAS6,FLJ44054	-1934,-4237,45480
chr22:41459483-41459866	chr22	+	41459512	41459638	True	NM_138481,NR_031694	chr22,chr22	-,+	CHADL,MIR1281	177353,28878
chr5:140626178-140626624	chr5	+	140626179	140626489	True	NM_018935,NR_001282,NM_031947	chr5,chr5,chr5	+,+,-	PCDHB15,PCDHB19P,SLC25A2	-1083,-6541,57173
chr7:117864797-117865162	chr7	+	117864862	117865200	True	NM_033427,NM_019644	chr7,chr7	-,+	CTTNBP2,ANKRD7	-351301,-201
chr18:52617296-52618230	chr18	+	52617330	52617746	True	NM_004163,NM_001143829,NM_025214	chr18,chr18,chr18	+,-,-	RAB27B,CCDC68,CCDC68	-121541,7583,9043
chr12:38711883-38712648	chr12	+	38711981	38712647	True	NM_001013620,NM_153634	chr12,chr12	+,-	ALG10B,CPNE8	-1484,586823
chrX:55294416-55295628	chrX	+	55294697	55295262	True	NM_001013435,NR_033460	chrX,chrX	+,-	PAGE5,PAGE3	-47956,-3532
chr1:100734638-100735182	chr1	+	100734818	100734903	True	NM_001918,NM_003729,NM_001130841	chr1,chr1,chr1	-,+,+	DBT,RTCD1,RTCD1	-19409,-3163,-3163
chr10:25507233-25507597	chr10	+	25507261	25507648	True	NM_020752,NR_027333	chr10,chr10	+,-	GPR158,LOC100128811	-43023,-42056
chr20:31644414-31644625	chr20	+	31644529	31644655	True	NM_182658,NM_080675	chr20,chr20	+,-	C20orf185,SUN5	-1357,-52290
chr6:38610899-38611276	chr6	+	38610914	38611055	True	NM_052893,NM_001099272,NM_001371	chr6,chr6,chr6	-,-,+	BTBD9,BTBD9,DNAH8	-2990,-2990,79496
chr10:92619515-92620403	chr10	+	92619573	92620159	True	NM_000872,NM_019860,NM_006413,NM_019859	chr10,chr10,chr10,chr10	-,-,+,-	HTR7,HTR7,RPP30,HTR7	-1902,-1902,11549,-1902
chr5:156771470-156772476	chr5	+	156771476	156772424	True	NM_001001343,NM_014376	chr5,chr5	-,+	FNDC9,CYFIP2	357,-75165
chr5:70680170-70680466	chr5	+	70680285	70680522	True	NR_003922,NR_033968	chr5,chr5	+,-	PMCHL2,LOC100049076	-8732,-125163
chr19:16771651-16771862	chr19	+	16771779	16771849	True	NM_024104,NM_024074	chr19,chr19	-,+	C19orf42,TMEM38A	-811,88
chr14:105157050-105157382	chr14	+	105157060	105157340	True	NM_207379,NM_032714,NM_001031714,NM_022489	chr14,chr14,chr14,chr14	-,+,+,+	TMEM179,INF2,INF2,INF2	-85963,-1168,-1168,-1168
chr19:11070961-11071222	chr19	+	11070960	11071262	True	NM_001128844,NM_024029,NM_003072,NM_001128849	chr19,chr19,chr19,chr19	+,-,+,+	SMARCA4,YIPF2,SMARCA4,SMARCA4	335,-31603,335,545
chr1:24468441-24469109	chr1	+	24468445	24469011	True	NM_021258,NR_027087	chr1,chr1	-,+	IL22RA1,LOC284632	814,57718
chr17:12693128-12693385	chr17	+	12693149	12693257	True	NM_014859,NM_001165962	chr17,chr17	+,-	ARHGAP44,ELAC2	-371,228174
chr11:66674536-66674852	chr11	+	66674569	66674727	True	NM_024036,NM_022172	chr11,chr11	+,-	LRFN4,PC	-49744,663
chr7:39609604-39609884	chr7	+	39609642	39609929	True	NM_138701,NM_020192	chr7,chr7	-,+	C7orf11,C7orf36	564375,-3690
chr1:95700901-95701804	chr1	+	95701231	95701619	True	NR_037643,NM_001199682,NM_015485,NM_001128142,NM_144988	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	RWDD3,RWDD3,RWDD3,RWDD3,ALG14	-1579,-1579,-1579,-1579,-162724
chr13:115081797-115082583	chr13	+	115081830	115082456	True	NM_001164145,NM_001164144,NM_007368	chr13,chr13,chr13	+,+,-	ZNF828,ZNF828,RASA3	-1916,-1916,-183735
chr7:21617073-21619044	chr7	+	21617129	21619067	True	NM_003777,NM_001127370	chr7,chr7	+,-	DNAH11,CDCA7L	-34347,366525
chr10:51574138-51575412	chr10	+	51574358	51575434	True	NM_005437,NM_006327,NM_001145263,NM_001145262,NM_001145261,NM_001145260	chr10,chr10,chr10,chr10,chr10,chr10	+,-,+,+,+,+	NCOA4,TIMM23,NCOA4,NCOA4,NCOA4,NCOA4	-2045,47952,-9301,850,-9301,-9301
chrX:54950942-54951959	chrX	+	54951098	54951982	True	NM_002625,NM_001039705,NM_177556,NM_016157	chrX,chrX,chrX,chrX	-,+,+,+	PFKFB1,TRO,TRO,TRO	68579,-3902,-3902,-3902
chr4:81104767-81105041	chr4	+	81104767	81105029	True	NM_020226,NM_001145794	chr4,chr4	+,-	PRDM8,ANTXR2	1394,-110290
chr20:3184460-3184899	chr20	+	3184464	3184936	True	NM_033453,NM_181493,NM_023935	chr20,chr20,chr20	+,+,-	ITPA,ITPA,DDRGK1	5119,5119,409
chr7:80291696-80292755	chr7	+	80291799	80292799	True	NM_001102386,NM_001127444	chr7,chr7	-,+	GNAT3,CD36	-150557,-16088
chr5:70221063-70221822	chr5	+	70221098	70221556	True	NM_022876,NM_022877,NM_022874,NM_022875,NM_000344,NM_017411,NM_004536	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,-	SMN2,SMN2,SMN1,SMN2,SMN1,SMN2,NAIP	-381,-381,-381,-381,-381,-381,99435
chr5:70221063-70221822	chr5	+	69345680	69346138	False	NM_022876,NM_022877,NM_022874,NM_022875,NM_000344,NM_017411,NR_024054	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,-	SMN2,SMN2,SMN1,SMN2,SMN1,SMN2,LOC100170939	-381,-381,-381,-381,-381,-381,175534
chr1:110922625-110924272	chr1	+	110922782	110924296	True	NM_022768,NM_004696,NM_001201549,NM_001201548,NM_001201547,NM_001201546	chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,-,-,-	RBM15,SLC16A4,SLC16A4,SLC16A4,SLC16A4,SLC16A4	-40888,9459,9459,9459,9459,9459
chr16:85340723-85341481	chr16	+	85340769	85341423	True	NR_033984,NM_198491	chr16,chr16	+,-	LOC400548,FAM92B	-170064,-194655
chrX:122865648-122866214	chrX	+	122865647	122866168	True	NM_001204401,NM_001081550	chrX,chrX	+,-	XIAP,THOC2	127493,787
chr16:18802615-18804526	chr16	+	18802872	18804444	True	NM_001030009,NM_001019,NM_015161,NM_024847	chr16,chr16,chr16,chr16	-,-,-,+	RPS15A,RPS15A,ARL6IP1,TMC7	-1216,-1216,8463,190811
chr12:52460204-52461463	chr12	+	52460209	52461313	True	NM_001098673,NM_021934,NM_001081492	chr12,chr12,chr12	+,+,-	C12orf44,C12orf44,KRT80	2444,2444,124521
chr7:91797113-91798819	chr7	+	91797395	91798569	True	NM_001161528,NM_019004	chr7,chr7	-,+	LOC401387,ANKIB1	-2805,76978
chrX:63606039-63607498	chrX	+	63606046	63607529	True	NM_001010888,NM_017677	chrX,chrX	+,-	ZC3H12B,MTMR8	1101085,7855
chr7:2375003-2375890	chr7	+	2375463	2375551	True	NM_001037283,NM_013321	chr7,chr7	+,-	EIF3B,SNX8	18922,-21364
chr12:6960384-6960927	chr12	+	6960406	6960858	True	NM_003481,NM_001098536,NM_031299	chr12,chr12,chr12	+,+,-	USP5,USP5,CDCA3	432,426,50
chr19:11708827-11709822	chr19	+	11708895	11709717	True	NM_001111036,NM_145295	chr19,chr19	-,+	ACP5,ZNF627	-19094,-714
chr19:19755640-19756163	chr19	+	19755640	19755880	True	NM_033204,NM_016573	chr19,chr19	+,-	ZNF101,GMIP	23782,-1185
chr10:49816772-49818391	chr10	+	49816978	49818382	True	NM_020945,NM_021226	chr10,chr10	+,-	WDFY4,ARHGAP22	75135,-3840
chr21:30670186-30670481	chr21	+	30670232	30670476	True	NM_206866,NR_027655,NM_001186,NM_006585	chr21,chr21,chr21,chr21	+,+,+,-	BACH1,BACH1,BACH1,CCT8	1260,7083,743,-224222
chr3:184031044-184031370	chr3	+	184031044	184031268	True	NM_004953,NM_001194947,NM_198242,NM_198241,NM_001194946,NM_198244,NM_001171087,NM_182917	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,+,+,-,+	EIF4G1,EIF4G1,EIF4G1,EIF4G1,EIF4G1,EIF4G1,CLCN2,EIF4G1	6832,1014,1014,1014,1014,1014,48183,1683
chr9:77714599-77715500	chr9	+	77714949	77715186	True	NM_012383,NR_023352	chr9,chr9	+,-	OSTF1,C9orf95	-11614,-11816
chr1:153747783-153748060	chr1	+	153747868	153748078	True	NM_024330,NM_004515	chr1,chr1	+,-	SLC27A3,ILF2	-151,-104389
chr21:40827611-40829577	chr21	+	40827704	40829552	True	NM_152505,NM_007341,NM_001001713	chr21,chr21,chr21	-,+,+	LCA5L,SH3BGR,SH3BGR	-11576,-3975,-9958
chr6:16239388-16239704	chr6	+	16239393	16239723	True	NM_000332,NM_006877	chr6,chr6	-,+	ATXN1,GMPR	522048,-633
chr17:62661605-62662236	chr17	+	62661605	62662092	True	NM_022739,NM_138363	chr17,chr17	-,+	SMURF2,CCDC45	-3219,-158498
chr10:106113192-106113595	chr10	+	106113196	106113626	True	NM_001008723,NM_033397	chr10,chr10	+,-	CCDC147,ITPRIP	-17,-19533
chr12:133196695-133197315	chr12	+	133196823	133197341	True	NM_174872,NM_174873,NM_170683,NM_170682,NM_012226,NM_016318,NM_001195520	chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,+,+,+,+,-	P2RX2,P2RX2,P2RX2,P2RX2,P2RX2,P2RX2,LOC645277	-1471,-1471,-1471,-1471,-1471,-1471,-9786
chrX:26765699-26766062	chrX	+	26765703	26765966	True	NR_001559,NR_002784	chrX,chrX	+,-	VENTXP1,SMEK3P	-189300,715553
chr1:229692041-229693745	chr1	+	229692279	229693633	True	NM_012089,NM_014777	chr1,chr1	-,+	ABCB10,URB2	859,68347
chrX:124097804-124099017	chrX	+	124097810	124098817	True	NM_014253,NM_001163278,NM_001163279,NM_001195272	chrX,chrX,chrX,chrX	-,-,-,+	ODZ1,ODZ1,ODZ1,LOC100129520	-144,-144,-144,355151
chr7:150148709-150149969	chr7	+	150148915	150149495	True	NM_175571,NM_002889	chr7,chr7	+,-	GIMAP8,RARRES2	-1004,-110152
chr6:138723312-138724530	chr6	+	138723316	138724471	True	NR_036099,NM_014320	chr6,chr6	-,+	MIR3145,HEBP2	32010,864
chrX:153170647-153170902	chrX	+	153170684	153170750	True	NM_001164741,NM_001146151,NM_000054,NR_027419	chrX,chrX,chrX,chrX	-,+,+,+	ARHGAP4,AVPR2,AVPR2,AVPR2	21014,-206,-206,-2750
chr1:10095215-10095545	chr1	+	10095389	10095454	True	NM_001105562,NM_032368,NM_006048	chr1,chr1,chr1	+,-,+	UBE4B,LZIC,UBE4B	-2404,-92563,-2404
chr12:93963699-93963924	chr12	+	93963706	93963956	True	NM_003877,NM_003348	chr12,chr12	+,-	SOCS2,UBE2N	-160,-127680
chr5:3595162-3595368	chr5	+	3595267	3595403	True	NR_033898,NM_024337	chr5,chr5	-,+	LOC285577,IRX1	-59059,764
chr12:53615815-53617237	chr12	+	53615895	53617017	True	NM_000966,NM_001170790,NM_001042728	chr12,chr12,chr12	-,+,-	RARG,MFSD5,RARG	9069,28352,-1745
chr14:105990657-105991543	chr14	+	105990796	105991443	True	NM_025268,NM_001519	chr14,chr14	+,-	TMEM121,BRF1	1509,-223467
chr8:105481311-105482637	chr8	+	105481345	105482520	True	NM_001385,NM_030788	chr8,chr8	-,+	DPYS,TM7SF4	-2068,-129343
chr16:75190209-75191715	chr16	+	75190524	75191528	True	NM_194436,NM_153688	chr16,chr16	-,+	LDHD,ZFP1	-39854,-8154
chr4:648788-649107	chr4	+	648849	649003	True	NM_007100,NM_001145292	chr4,chr4	-,+	ATP5I,PDE6B	19174,-1934
chr1:116661839-116663410	chr1	+	116661915	116663403	True	NM_152367,NM_005599	chr1,chr1	+,-	MAB21L3,NHLH2	-7598,-278168
chr22:35838131-35838459	chr22	+	35838173	35838497	True	NM_005368,NM_006739	chr22,chr22	-,+	MB,MCM5	174937,-42108
chr5:148736782-148737365	chr5	+	148736822	148737286	True	NM_024028,NM_014443	chr5,chr5	+,-	PCYOX1L,IL17B	283,21602
chr8:68656862-68658282	chr8	+	68656959	68658271	True	NM_020361,NM_025170	chr8,chr8	-,+	CPA6,PREX2	399,206331
chr20:17942931-17943429	chr20	+	17943146	17943468	True	NR_003045,NM_152227,NM_014426,NM_052865	chr20,chr20,chr20,chr20	-,-,-,+	SNORD17,SNX5,SNX5,C20orf72	171,6072,5736,6293
chr14:89047827-89048715	chr14	+	89047979	89048732	True	NM_207662,NM_007039	chr14,chr14	+,-	ZC3H14,PTPN21	11997,-26856
chr15:52310383-52310916	chr15	+	52310556	52310860	True	NM_138792,NM_002748	chr15,chr15	-,+	LEO1,MAPK6	-46598,550
chr11:5621444-5622299	chr11	+	5621590	5622321	True	NM_001003819,NM_001003818,NM_001005289,NM_001198645,NM_001198644,NM_058166	chr11,chr11,chr11,chr11,chr11,chr11	+,+,-,+,+,+	TRIM6-TRIM34,TRIM6,OR52H1,TRIM6,TRIM6,TRIM6	-3776,-3776,-54837,-3776,-3776,-4310
chr7:144703967-144704686	chr7	+	144703980	144704536	True	NM_005435,NM_022445	chr7,chr7	+,-	ARHGEF5,TPK1	-651542,-170834
chr9:95896646-95896989	chr9	+	95896764	95896908	True	NM_004148,NM_032310	chr9,chr9	-,+	NINJ1,C9orf89	-194,-38365
chr9:136859528-136859865	chr9	+	136859639	136859903	True	NM_003371,NR_015427,NM_001134398	chr9,chr9,chr9	-,+,-	VAV2,NCRNA00094,VAV2	-2193,30657,-2193
chr19:1476518-1477997	chr19	+	1476527	1477658	True	NM_138393,NM_152482	chr19,chr19	+,-	REEP6,C19orf25	13506,1621
chr5:445756-446334	chr5	+	446000	446331	True	NM_007277,NM_138464	chr5,chr5	+,-	EXOC3,C5orf55	-2717,-2742
chr19:858786-859393	chr19	+	858862	859358	True	NM_001972,NM_001928,NM_005481	chr19,chr19,chr19	+,+,-	ELANE,CFD,MED16	-6622,306,33910
chr1:225998044-225998611	chr1	+	225998083	225998287	True	NM_001136018,NM_014698	chr1,chr1	+,-	EPHX1,TMEM63A	-337,72183
chr11:131148504-131148958	chr11	+	131148536	131148996	True	NM_001048209,NM_014758	chr11,chr11	+,-	NTM,SNX19	91374,-362154
chr12:93146717-93147256	chr12	+	93146793	93147156	True	NM_001004330,NM_003566	chr12,chr12	+,-	PLEKHG7,EEA1	-16579,176014
chr2:233392174-233392480	chr2	+	233392469	233392529	True	NM_001195129,NM_145702,NM_000751	chr2,chr2,chr2	+,-,+	PRSS56,TIGD1,CHRND	-7347,22747,-1598
chr17:11780328-11781344	chr17	+	11780382	11781099	True	NM_004662,NM_144680	chr17,chr17	+,-	DNAH9,ZNF18	5119,119659
chr4:39529908-39530485	chr4	+	39529938	39530330	True	NR_026854,NM_001184701,NM_001184700,NM_003359	chr4,chr4,chr4,chr4	+,-,-,-	LOC401127,UGDH,UGDH,UGDH	-48114,-720,-720,-720
chr7:97617774-97618052	chr7	+	97617784	97618030	True	NM_006188,NM_014916	chr7,chr7	-,+	OCM2,LMTK2	1436,118166
chr6:155542072-155543178	chr6	+	155542333	155543065	True	NM_016020,NM_001010927	chr6,chr6	-,+	TFB1M,TIAM2	92602,-4287
chrX:48775555-48776070	chrX	+	48775700	48775932	True	NM_005660,NM_006875,NM_001167992,NM_001032289,NM_001042498	chrX,chrX,chrX,chrX,chrX	-,-,+,-,-	SLC35A2,PIM2,PQBP1,SLC35A2,SLC35A2	-6783,531,-19976,-6767,-6465
chr9:35490908-35491359	chr9	+	35490947	35491390	True	NM_014806,NM_001099951	chr9,chr9	+,-	RUSC2,FAM166B	-992,72556
chr14:92417627-92417847	chr14	+	92417727	92417854	True	NM_006329,NM_017437	chr14,chr14	-,+	FBLN5,CPSF2	-3681,170443
chr22:41775751-41776424	chr22	+	41775945	41776361	True	NM_003216,NM_016272	chr22,chr22	+,-	TEF,TOB2	1601,66716
chr2:170508922-170509225	chr2	+	170509001	170509219	True	NM_001085447,NM_001008489	chr2,chr2	-,+	C2orf77,PHOSPHO2	41767,41744
chr6:27218964-27219274	chr6	+	27218968	27219046	True	NM_005865,NM_033482	chr6,chr6	+,-	PRSS16,POM121L2	-3517,61015
chr8:63178322-63179315	chr8	+	63178423	63179307	True	NM_173688,NM_001164756	chr8,chr8	+,-	NKAIN3,ASPH	-16981,-551224
chr17:8343319-8344364	chr17	+	8343459	8344397	True	NM_030808,NM_001146684,NM_001025579	chr17,chr17,chr17	+,-,+	NDEL1,RNF222,NDEL1	-4337,-42315,-4337
chr4:286555-287899	chr4	+	286915	287779	True	NM_001137608,NM_003441	chr4,chr4	-,+	ZNF732,ZNF141	2221,43816
chr22:24309746-24309976	chr22	+	24309821	24309999	True	NM_000854,NM_001080843,NM_001084393,NM_001084392	chr22,chr22,chr22,chr22	-,-,+,-	GSTT2,GSTT2B,DDTL,DDT	-6428,-6453,-846,6731
chr22:24309746-24309976	chr22	-	24315706	24315884	False	NM_001084393,NM_001355,NM_000854,NM_001084392	chr22,chr22,chr22,chr22	+,-,+,-	DDTL,DDT,GSTT2,DDT	-6731,6185,6429,846
chr19:42778300-42778715	chr19	+	42778339	42778745	True	NM_006494,NM_015125	chr19,chr19	-,+	ERF,CIC	-19030,10071
chr16:231021-231392	chr16	+	231049	231221	True	NM_001077350,NM_000558,NM_000517,NM_005331	chr16,chr16,chr16,chr16	-,+,+,+	NPRL3,HBA1,HBA2,HBQ1	-42377,-4421,-8254,-767
chr7:100843677-100844171	chr7	+	100843685	100844217	True	NM_178176,NM_006349	chr7,chr7	-,+	MOGAT3,ZNHIT1	135,16767
chr19:3583360-3584005	chr19	+	3583363	3583659	True	NM_001060,NM_133261	chr19,chr19	-,+	TBXA2R,GIPC3	23222,1909
chr9:99215440-99217091	chr9	+	99215814	99217112	True	NM_153695,NM_014282	chr9,chr9	-,+	ZNF367,HABP4	-35145,-3464
chr19:19975657-19976233	chr19	+	19975785	19976033	True	NM_021047,NM_001145404	chr19,chr19	+,-	ZNF253,ZNF506	680,-43225
chr17:47289097-47289710	chr17	+	47289649	47289711	True	NM_016428,NM_001198756,NM_001198755,NM_001198754,NM_001135186,NM_031498	chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,-,+,-	ABI3,GNGT2,GNGT2,GNGT2,ABI3,GNGT2	-2112,-2887,-2887,-1713,-2112,-2906
chr3:39114004-39115052	chr3	+	39114019	39115052	True	NM_020839,NM_031899	chr3,chr3	+,-	WDR48,GORASP1	-20563,34135
chr9:139604633-139605217	chr9	+	139604633	139605231	True	NM_152421,NR_002975	chr9,chr9	+,-	FAM69B,SNORA43	1792,15508
chr4:9784175-9784468	chr4	+	9784233	9784497	True	NR_031688,NM_000798	chr4,chr4	-,+	MIR548I2,DRD5	-226296,-1026
chr1:145516563-145517798	chr1	+	145516596	145517593	True	NR_002328,NM_003846,NM_001184795,NM_003637,NM_005105	chr1,chr1,chr1,chr1,chr1	-,+,+,+,+	GNRHR2,PEX11B,PEX11B,ITGA10,RBM8A	-520,-482,-87,7396,-9090
chr11:69293792-69295005	chr11	+	69294113	69294919	True	NM_153451,NM_053056	chr11,chr11	-,+	ORAOV1,CCND1	195296,160953
chr1:244817020-244817477	chr1	+	244817123	244817519	True	NR_026778,NM_016076	chr1,chr1	-,+	NCRNA00201,PPPDE1	192774,-822
chr15:38800145-38801782	chr15	+	38800249	38801567	True	NM_001128602,NM_173611	chr15,chr15	-,+	RASGRP1,FAM98B	55490,-53972
chr16:20782541-20784143	chr16	+	20783866	20783949	True	NM_017736,NM_202000,NM_005622	chr16,chr16,chr16	-,+,+	THUMPD1,ACSM3,ACSM3	-30667,-8605,-8605
chr4:142566049-142567321	chr4	+	142566167	142567337	True	NM_020724,NR_037840,NM_000585,NM_172175	chr4,chr4,chr4,chr4	-,+,+,+	RNF150,IL15,IL15,IL15	-511551,-8476,-8476,-8476
chr16:11759846-11760245	chr16	+	11759909	11760199	True	NM_003498,NM_015914	chr16,chr16	+,-	SNN,TXNDC11	2089,76499
chr12:105377856-105379511	chr12	+	105378078	105379432	True	NM_152318,NM_032148	chr12,chr12	+,-	C12orf45,SLC41A2	665,-55606
chr2:220437625-220438416	chr2	+	220437730	220438224	True	NM_002191,NM_015311,NM_001173431,NM_001173408	chr2,chr2,chr2,chr2	+,-,-,-	INHA,OBSL1,OBSL1,OBSL1	-828,-1462,-1462,-1462
chr5:140101528-140103141	chr5	+	140101637	140102942	True	NR_026705,NR_026704,NM_002109	chr5,chr5,chr5	+,+,-	VTRNA1-3,VTRNA1-2,HARS	2801,-3184,-30666
chr15:80198351-80198736	chr15	+	80198403	80198742	True	NM_006441,NM_001199758,NM_001100879,NR_037654,NR_028330	chr15,chr15,chr15,chr15,chr15	-,-,-,-,+	MTHFS,MTHFS,ST20,MTHFS,C15orf37	-9012,-8776,8907,-9064,16370
chr3:127540240-127541320	chr3	+	127540547	127541206	True	NM_207335,NM_001003794,NM_007283	chr3,chr3,chr3	+,-,-	KBTBD12,MGLL,MGLL	100695,895,545
chr4:1872540-1872742	chr4	+	1872587	1872791	True	NM_012318,NM_001042424	chr4,chr4	-,+	LETM1,WHSC1	-14613,331
chr17:20384332-20385272	chr17	+	20384373	20385285	True	NM_001190790,NM_001042685	chr17,chr17	+,-	CDRT15L2,LGALS9B	97751,-13525
chr17:20384332-20385272	chr17	-	18365735	18366644	False	NR_003554,NM_001040078	chr17,chr17	-,+	LOC220594,LGALS9C	57972,13454
chr1:1937067-1937891	chr1	+	1937447	1937573	True	NM_000815,NM_001080484	chr1,chr1	+,-	GABRD,KIAA1751	13194,-2171
chr19:1269777-1270129	chr19	+	1269787	1269953	True	NR_027271,NM_017914,NR_023313,NM_001280,NR_023312	chr19,chr19,chr19,chr19,chr19	-,+,+,+,+	C19orf23,C19orf24,CIRBP,CIRBP,CIRBP	356,5566,-571,-571,-571
chr16:19178560-19179047	chr16	+	19178897	19178957	True	NM_016524,NM_015092	chr16,chr16	+,-	SYT17,SMG1	680,-241171
chr21:41120396-41121298	chr21	+	41120485	41121037	True	NR_026543,NM_001080444	chr21,chr21	-,+	C21orf88,IGSF5	-135736,-3202
chr12:129340418-129341058	chr12	+	129340940	129341106	True	NM_145648,NM_144669	chr12,chr12	-,+	SLC15A4,GLT1D1	-32399,-2910
chr2:219524701-219525805	chr2	+	219524755	219525759	True	NM_001105537,NM_004328,NM_001079866	chr2,chr2,chr2	-,+,+	ZNF142,BCS1L,BCS1L	-494,-427,-427
chr14:23846764-23847355	chr14	+	23846811	23847309	True	NM_022789,NM_138460,NR_029595,NM_172314,NM_001037288	chr14,chr14,chr14,chr14,chr14	+,+,-,+,+	IL25,CMTM5,MIR208A,IL25,CMTM5	-4792,-845,10616,-4844,-845
chr7:97618486-97619061	chr7	+	97618530	97618701	True	NM_006188,NM_014916	chr7,chr7	-,+	OCM2,LMTK2	772,117495
chr20:13764550-13765184	chr20	+	13764550	13765109	True	NM_001039375,NR_029377,NM_024120,NM_016649	chr20,chr20,chr20,chr20	+,+,+,-	C20orf7,C20orf7,C20orf7,ESF1	562,562,562,473
chr7:86850595-86851725	chr7	+	86850602	86851766	True	NM_024315,NM_021145	chr7,chr7	-,+	C7orf23,DMTF1	-1571,-68784
chr14:74003082-74003314	chr14	+	74003138	74003322	True	NM_203309,NM_001037161	chr14,chr14	-,+	HEATR4,ACOT1	22383,605
chr4:74485122-74486127	chr4	+	74485208	74486085	True	NM_177532,NM_000584,NM_201431	chr4,chr4,chr4	-,+,-	RASSF6,IL8,RASSF6	99,120137,305
chr7:141250221-141251023	chr7	+	141250306	141250982	True	NM_018238,NM_001080392	chr7,chr7	+,-	AGK,KIAA1147	95,151021
chr14:63562117-63563202	chr14	+	63562512	63563224	True	NM_172376,NM_020663	chr14,chr14	-,+	KCNH5,RHOJ	5412,107920
chr5:102898629-102899482	chr5	+	102898706	102899370	True	NM_033211,NM_031438	chr5,chr5	+,-	C5orf30,NUDT12	-304315,-216
chr5:14582846-14583652	chr5	+	14583053	14583667	True	NM_019018,NR_037899	chr5,chr5	+,-	FAM105A,LOC100128508	-1222,193524
chr12:128035156-128036209	chr12	+	128035155	128036210	True	NR_033970,NR_033987	chr12,chr12	-,+	LOC440117,FLJ37505	-675919,329951
chr9:102840756-102842484	chr9	+	102841500	102842533	True	NM_015051,NM_014425	chr9,chr9	-,+	ERP44,INVS	18847,18977
chr7:113562376-113563027	chr7	+	113562425	113563041	True	NM_002711,NR_033766	chr7,chr7	-,+	PPP1R3A,FOXP2	-3343,163323
chr22:29876576-29876817	chr22	+	29876660	29876832	True	NR_002727,NM_021076	chr22,chr22	-,+	RFPL1S,NEFH	-38542,-530
chr11:117857361-117857817	chr11	+	117857371	117857847	True	NR_026691,NM_001077263,NM_001558	chr11,chr11,chr11	+,-,+	IL10RA,TMPRSS13,IL10RA	-316,-57256,-316
chr1:236273086-236273294	chr1	+	236273156	236273342	True	NM_002508,NM_003272	chr1,chr1	-,+	NID1,GPR137B	-44675,32489
chr11:45684025-45684313	chr11	+	45684074	45684268	True	NR_027134,NM_003654	chr11,chr11	+,-	DKFZp779M0652,CHST1	108714,2968
chr19:44488349-44488581	chr19	+	44488358	44488442	True	NM_003445,NM_198089,NM_003425	chr19,chr19,chr19	+,+,-	ZNF155,ZNF155,ZNF45	-54,-54,-48947
chrX:62974498-62974814	chrX	+	62974516	62974782	True	NM_015185,NM_001010888,NM_001173480	chrX,chrX,chrX	-,+,-	ARHGEF9,ZC3H12B,ARHGEF9	299,1733832,299
chr15:36868458-36870217	chr15	+	36868562	36870076	True	NM_001130010,NR_027320	chr15,chr15	+,-	C15orf41,CSNK1A1P1	1735,240684
chr8:31497648-31497938	chr8	+	31497701	31497933	True	NM_013962,NM_001015508	chr8,chr8	+,-	NRG1,PURG	-484,-606470
chr9:96337633-96337980	chr9	+	96337659	96337987	True	NM_198841,NM_005392	chr9,chr9	-,+	FAM120AOS,PHF2	-121785,921
chr10:13629020-13629713	chr10	+	13629059	13629729	True	NM_003675,NM_001100912	chr10,chr10	+,-	PRPF18,BEND7	-171,-84083
chr2:61991799-61992114	chr2	+	61991805	61992022	True	NM_001201543,NM_152516	chr2,chr2	-,+	FAM161A,COMMD1	89319,140780
chr7:1611506-1612588	chr7	+	1611675	1612480	True	NM_001134340,NR_021487,NM_032302,NR_027328,NR_027329	chr7,chr7,chr7,chr7,chr7	-,+,-,+,+	PSMG3,KIAA1908,PSMG3,KIAA1908,KIAA1908	-2007,-2018,-2046,-2018,-2018
chr1:46915539-46916570	chr1	+	46915651	46916484	True	NM_147192,NM_001097611,NM_001441	chr1,chr1,chr1	+,-,+	DMBX1,KNCN,FAAH	56183,100460,-55764
chr7:143316672-143317292	chr7	+	143316768	143317210	True	NM_178561,NM_001130025,NM_173678	chr7,chr7,chr7	-,+,+	CTAGE6P,FAM115C,FAM115C	137683,834,1331
chr7:143316672-143317292	chr7	-	143534635	143535077	False	NR_015421,NM_001004685	chr7,chr7	-,+	LOC154761,OR2F2	-825,97248
chr1:24825466-24826607	chr1	+	24825474	24826454	True	NM_001199012,NM_013441	chr1,chr1	-,+	C1orf201,RCAN3	-83887,2932
chr17:47866546-47867649	chr17	+	47866809	47867460	True	NM_007067,NM_001199155,NM_001199156,NM_001199157,NM_001199158,NM_030802	chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,-	MYST2,MYST2,MYST2,MYST2,MYST2,FAM117A	-880,-880,-880,-880,-880,-25291
chrX:139794545-139794947	chrX	+	139794589	139794953	True	NM_004065,NR_028345,NR_028344	chrX,chrX,chrX	-,+,+	CDR1,RP1-177G6.2,RP1-177G6.2	71820,-2723,-2723
chr14:51709417-51710394	chr14	+	51709637	51710422	True	NM_052978,NM_030755	chr14,chr14	-,+	TRIM9,TMX1	-147215,-2809
chr2:66662244-66662899	chr2	+	66662249	66662867	True	NM_181784,NM_002398	chr2,chr2	-,+	SPRED2,MEIS1	-1002593,18
chr17:76128703-76128967	chr17	+	76128896	76128984	True	NM_007267,NM_001127198,NM_152468	chr17,chr17,chr17	-,-,+	TMC6,TMC6,TMC8	-408,-4035,-2088
chr1:161194656-161195881	chr1	+	161195148	161195840	True	NM_001643,NM_032174	chr1,chr1	-,+	APOA2,TOMM40L	-1730,-8
chr22:26828538-26829452	chr22	+	26828669	26829422	True	NM_152841,NM_020437	chr22,chr22	-,+	HPS4,ASPHD2	46180,-3440
chr8:139508579-139508946	chr8	+	139508767	139508887	True	NM_015912,NM_017444	chr8,chr8	-,+	FAM135B,CHRAC1	228,2012513
chr5:138609483-138609698	chr5	+	138609516	138609682	True	NR_003141,NR_002915,NR_036536,NR_036535,NM_022464,NM_199189,NM_001194954	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,-,+,+	SNHG4,SNORA74A,SNHG4,MATR3,SIL1,MATR3,MATR3	-126,4786,-126,-126,-75451,-126,-126
chr17:34989899-34990372	chr17	+	34989905	34990393	True	NM_024864,NM_001033580	chr17,chr17	+,-	MRM1,MYO19	-31931,-98600
chr3:56719077-56720213	chr3	+	56719244	56719681	True	NR_024460,NM_001112736	chr3,chr3	+,-	CCDC66,C3orf63	-128119,-2109
chr10:46090412-46091072	chr10	+	46090537	46090842	True	NM_001002265,NM_145021,NM_001169106	chr10,chr10,chr10	-,-,+	MARCH8,MARCH8,FAM21C	-183,-183,131805
chr8:8023493-8024274	chr8	+	8023764	8024053	True	NR_031689,NR_024362	chr8,chr8	-,+	MIR548I3,FLJ10661	-77153,62038
chr8:8023493-8024274	chr8	-	12356643	12356932	False	NR_026789,NM_001137610	chr8,chr8	+,-	FAM66A,FAM86B2	-137167,-62791
chr14:24733781-24734144	chr14	+	24733823	24734139	True	NM_000359,NM_004581,NM_016576,NM_182836	chr14,chr14,chr14,chr14	-,-,+,-	TGM1,RABGGTA,GMPR2,RABGGTA	-1407,6654,-31773,6714
chr1:150123154-150124168	chr1	+	150123159	150124179	True	NM_016274,NM_001136479	chr1,chr1	+,-	PLEKHO1,ANP32E	-1040,82897
chr7:39042412-39044402	chr7	+	39042540	39044404	True	NM_007252,NM_080631	chr7,chr7	+,-	POU6F2,VPS41	-24989,-93740
chr13:40171218-40172883	chr13	+	40171240	40172600	True	NM_020751,NM_005780	chr13,chr13	+,-	COG6,LHFP	57163,4811
chr17:15465824-15466458	chr17	+	15465898	15466396	True	NM_145301,NM_001135036,NR_037924,NM_001204478,NM_001130842	chr17,chr17,chr17,chr17,chr17	-,-,-,-,+	FAM18B2,FAM18B2,FAM18B2-CDRT4,FAM18B2-CDRT4,ZNF286A	599,599,599,599,136494
chr17:15465824-15466458	chr17	-	18685057	18685470	False	NM_016078,NM_001145045	chr17,chr17	+,-	FAM18B1,ZNF286B	-529,-99485
chr17:48207063-48207282	chr17	+	48207093	48207177	True	NM_001199899,NM_174920	chr17,chr17	+,-	PDK2,SAMD14	-34085,40
chr8:22299244-22300343	chr8	+	22299395	22300373	True	NM_005605,NR_029714	chr8,chr8	+,-	PPP3CC,MIR320A	-850,-196839
chr15:25457991-25458396	chr15	+	25458029	25458445	True	NR_003351,NR_003315,NR_003314,NR_003313,NR_003495,NR_003496,NR_003310,NR_003497,NR_003311,NR_022010,NR_003358,NR_003344,NR_003309,NM_130838,NR_003342,NR_003343,NR_003303,NR_003307,NR_003312	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,+,+,+,+,-,+,+,+,+,+	SNORD115-36,SNORD115-23,SNORD115-22,SNORD115-21,SNORD115-24,HBII-52-27,SNORD115-18,HBII-52-28,SNORD115-19,PAR4,SNORD115-43,SNORD115-29,SNORD115-17,UBE3A,SNORD115-25,SNORD115-26,SNORD115-11,SNORD115-15,SNORD115-20	9947,-1137,-3015,-6671,360,7204,-8576,9055,-8576,-1241,9947,9947,-8576,192258,2242,5318,9947,-6671,-6671
chr11:71938141-71939075	chr11	+	71938233	71938851	True	NM_005169,NM_001567	chr11,chr11	-,+	PHOX2A,INPPL1	16419,-2402
chr3:47018684-47019061	chr3	+	47018988	47019052	True	NM_144716,NM_015175	chr3,chr3	-,+	CCDC12,NBEAL2	-718,2120
chr17:42907483-42907703	chr17	+	42907539	42907681	True	NM_016438,NM_001080383,NM_005497	chr17,chr17,chr17	+,-,-	HIGD1B,GJC1,GJC1	17597,548,-24
chr1:46935968-46936432	chr1	+	46936032	46936462	True	NM_147192,NM_001097611	chr1,chr1	+,-	DMBX1,KNCN	36205,80475
chr14:23651283-23651721	chr14	+	23651328	23651762	True	NM_012244,NM_017924	chr14,chr14	-,+	SLC7A8,C14orf119	1137,-86591
chr5:69496362-69497135	chr5	+	69496885	69496963	True	NM_022877,NR_024054	chr5,chr5	+,-	SMN2,LOC100170939	-151590,24709
chr3:196040823-196041096	chr3	+	196040991	196041060	True	NM_152672,NM_152773	chr3,chr3	+,-	OSTalpha,TCTEX1D2	-97666,4162
chr10:16478219-16478505	chr10	+	16478340	16478492	True	NM_001001484,NM_001010908,NM_030664	chr10,chr10,chr10	+,-,+	PTER,C1QL3,PTER	474,85562,474
chr1:1199804-1201098	chr1	+	1200285	1200866	True	NR_037668,NM_194458,NM_194315,NM_194457,NM_001130413,NM_058167	chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,-,+,-	SCNN1D,UBE2J2,UBE2J2,UBE2J2,SCNN1D,UBE2J2	9771,8419,8419,8419,9771,8419
chr1:215224222-215225537	chr1	+	215224319	215225562	True	NM_001017425,NM_005401	chr1,chr1	+,-	KCNK2,PTPN14	30997,-499295
chr19:592177-592392	chr19	+	592176	592286	True	NM_001194,NM_005035	chr19,chr19	+,-	HCN2,POLRMT	-2334,41332
chr3:57583598-57583917	chr3	+	57583614	57583876	True	NM_001660,NM_177966	chr3,chr3	-,+	ARF4,PDE12	-399,-41684
chr2:232261592-232261902	chr2	+	232261609	232261939	True	NR_002921,NM_145236	chr2,chr2	-,+	SNORA75,B3GNT7	58758,-1325
chr3:46445871-46447553	chr3	+	46446218	46447289	True	NM_003965,NM_001199149,NM_001130910	chr3,chr3,chr3	+,-,+	CCRL2,LTF,CCRL2	1431,57929,1759
chr3:148805103-148805464	chr3	+	148805265	148805351	True	NM_032383,NM_139048,NM_003071	chr3,chr3,chr3	+,-,-	HPS3,HLTF,HLTF	42019,-924,-924
chr15:85259752-85260246	chr15	+	85259770	85260294	True	NM_014630,NM_014300	chr15,chr15	+,-	ZNF592,SEC11A	31523,-96
chr15:42131656-42131883	chr15	+	42131663	42131815	True	NR_036195,NM_001114633	chr15,chr15	-,+	MIR4310,PLA2G4B	26984,-703
chr5:177421411-177421748	chr5	+	177421410	177421796	True	NM_006261,NM_001079527	chr5,chr5	-,+	PROP1,FAM153C	1497,13892
chr15:74500457-74501205	chr15	+	74500524	74501236	True	NM_022369,NM_001199042,NM_001199040,NM_001199041,NM_001142619,NM_001142618,NM_001142617,NM_001142620,NM_025055	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,-,-,-,-,-,-,+	STRA6,STRA6,STRA6,STRA6,STRA6,STRA6,STRA6,STRA6,CCDC33	-5304,-5304,860,-129,185,-4968,185,185,27430
chr1:44170022-44171794	chr1	+	44170181	44171495	True	NM_174963,NM_174964,NM_174965,NM_174966,NM_174967,NM_174968,NM_174969,NM_174971,NM_174970,NR_033827,NM_006279	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,+,+,+,+,-,+	ST3GAL3,ST3GAL3,ST3GAL3,ST3GAL3,ST3GAL3,ST3GAL3,ST3GAL3,ST3GAL3,ST3GAL3,LOC100132774,ST3GAL3	1722,1722,1722,1722,1722,1722,1722,1722,1722,1567,1722
chr10:4879672-4881608	chr10	+	4879752	4881486	True	NM_001040177,NR_026743	chr10,chr10	+,-	AKR1E2,tAKR	-11401,77041
chr2:55634663-55635524	chr2	+	55635271	55635541	True	NM_080667,NM_001135597	chr2,chr2	+,-	CCDC104,CCDC88A	111198,11568
chr19:47522271-47522711	chr19	+	47522429	47522747	True	NM_002517,NM_017854	chr19,chr19	+,-	NPAS1,TMEM160	1395,29185
chr1:24469392-24469662	chr1	+	24469485	24469651	True	NM_021258,NR_027087	chr1,chr1	-,+	IL22RA1,LOC284632	174,57078
chr10:101419480-101419742	chr10	+	101419546	101419734	True	NM_020354,NM_031212	chr10,chr10	+,-	ENTPD7,SLC25A28	-334,-39325
chrX:53449827-53450029	chrX	+	53449829	53450029	True	NM_006306,NM_001031745,NM_144968	chrX,chrX,chrX	-,+,+	SMC1A,RIBC1,RIBC1	-211,6,-41
chr1:12705473-12705721	chr1	+	12705501	12705561	True	NM_001013630,NM_004753	chr1,chr1	+,-	AADACL4,DHRS3	-986,-27681
chr12:113436966-113437510	chr12	+	113436974	113437444	True	NM_016817,NM_001193521	chr12,chr12	+,-	OAS2,RASAL1	-20751,136165
chr19:6360682-6361052	chr19	+	6360887	6361061	True	NM_006012,NM_004158	chr19,chr19	+,-	CLPP,PSPN	401,14849
chr2:105950183-105951012	chr2	+	105950550	105951015	True	NM_001142621,NM_024093,NM_004257	chr2,chr2,chr2	-,+,-	TGFBRAP1,C2orf49,TGFBRAP1	-4402,2997,-4402
chr11:116641600-116643181	chr11	+	116642049	116643132	True	NM_001159736,NM_032725,NM_000040	chr11,chr11,chr11	-,-,+	BUD13,BUD13,APOC3	639,639,57491
chr20:30329440-30330274	chr20	+	30329709	30329858	True	NM_012112,NM_138578	chr20,chr20	+,-	TPX2,BCL2L1	-2856,-19053
chr19:14542997-14543349	chr19	+	14543008	14543221	True	NM_005804,NM_213560,NM_002741	chr19,chr19,chr19	-,+,+	DDX39A,PKN1,PKN1	-12813,7864,944
chr19:49926846-49927827	chr19	+	49926973	49927501	True	NM_001195256,NM_178449	chr19,chr19	+,-	LOC645971,PTH2	2186,-275
chr9:39817733-39817989	chr9	+	39817741	39817875	True	NR_003528,NM_001085452	chr9,chr9	-,+	LOC653501,FAM75A1	-353215,67099
chr9:39817733-39817989	chr9	-	43684736	43684870	False	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	-54006,14
chr9:39817733-39817989	chr9	+	40633511	40633793	False	NM_001083124,NM_033160	chr9,chr9	+,-	FAM75A3,ZNF658	66497,158601
chr9:39817733-39817989	chr9	+	39288494	39288628	False	NM_033655,NM_001085452	chr9,chr9	-,+	CNTNAP3,FAM75A1	-194,67070
chr1:212207279-212208023	chr1	+	212207719	212208061	True	NM_001199809,NM_001199811,NM_001199812,NM_015434,NR_037667,NM_016448	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,+	INTS7,INTS7,INTS7,INTS7,INTS7,DTL	991,991,991,991,991,857
chr9:88514104-88514788	chr9	+	88514150	88514594	True	NM_015239,NM_024635	chr9,chr9	-,+	AGTPBP1,NAA35	-157206,41462
chr19:7456383-7457659	chr19	+	7456409	7457316	True	NR_024491,NM_015318	chr19,chr19	-,+	LOC100128573,ARHGEF18	80983,2682
chr6:64353017-64353605	chr6	+	64353051	64353630	True	NM_015153,NM_016571	chr6,chr6	+,-	PHF3,LGSN	2800,-323169
chr2:10183286-10183552	chr2	+	10183458	10183586	True	NM_001177716,NM_003597,NM_001037160,NM_001177718	chr2,chr2,chr2,chr2	+,+,-,+	KLF11,KLF11,CYS1,KLF11	369,95,37002,785
chr1:108167979-108169439	chr1	+	108168236	108169455	True	NM_001079874,NM_014917	chr1,chr1	-,+	VAV3,NTNG1	61726,-485549
chr4:22517890-22518111	chr4	+	22517918	22517998	True	NM_001128432,NM_145290	chr4,chr4	+,-	GBA3,GPR125	176549,-246
chr18:74961711-74961916	chr18	+	74961726	74961922	True	NM_001480,NM_001025100	chr18,chr18	+,-	GALR1,MBP	85,-116952
chrX:16727693-16728832	chrX	+	16728015	16728603	True	NM_032796,NM_019857,NM_001144002,NR_033181,NM_175859	chrX,chrX,chrX,chrX,chrX	+,-,-,+,-	SYAP1,CTPS2,CTPS2,SYAP1,CTPS2	9103,2506,1787,9103,2222
chr1:183605450-183605669	chr1	+	183605455	183605655	True	NM_015149,NM_005717	chr1,chr1	+,-	RGL1,ARPC5	-298,-470
chr7:93551559-93552669	chr7	+	93551569	93552615	True	NM_004126,NM_006528	chr7,chr7	+,-	GNG11,TFPI2	-611,-31504
chr15:62352973-62354232	chr15	+	62353346	62354252	True	NM_017684,NM_001018088,NM_018080,NM_020821,NM_207322	chr15,chr15,chr15,chr15,chr15	-,-,-,-,+	VPS13C,VPS13C,VPS13C,VPS13C,C2CD4A	-682,-682,-682,-682,4923
chr1:164326528-164328472	chr1	+	164326782	164328317	True	NM_001174069,NM_001204961	chr1,chr1	-,+	LMX1A,PBX1	997227,200279
chr2:11682462-11683208	chr2	+	11682503	11683182	True	NR_003095,NM_033090,NM_148903,NM_014668	chr2,chr2,chr2,chr2	-,+,+,+	E2F6,GREB1,GREB1,GREB1	-76206,-51,-2474,-8312
chr2:114392238-114392830	chr2	+	114392253	114392715	True	NM_007082,NR_000029,NM_013412,NR_024529,NR_024528,NR_024530,NR_024531	chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,-,+,-,-,-,-	RABL2A,RPL23AP7,RABL2A,RPL23AP7,RPL23AP7,RPL23AP7,RPL23AP7	-7487,-7538,-7487,-7538,-7538,-7538,-7538
chr7:560786-560992	chr7	+	560832	561006	True	NM_002607,NR_033963,NM_033023	chr7,chr7,chr7	-,+,-	PDGFA,FLJ44511,PDGFA	-1351,-855,-1351
chr6:26201481-26202361	chr6	+	26201599	26202357	True	NM_021065,NM_003545,NM_003530,NM_003522	chr6,chr6,chr6,chr6	-,+,-,+	HIST1H2AD,HIST1H4E,HIST1H3D,HIST1H2BF	-2128,2515,-2135,-1874
chr2:242811616-242811828	chr2	+	242811722	242811826	True	NM_173821,NM_005018	chr2,chr2	+,-	C2orf85,PDCD1	59,-10664
chr10:116701434-116701702	chr10	+	116701466	116701544	True	NM_139169,NM_001003408	chr10,chr10	+,-	TRUB1,ABLIM1	-3571,-257052
chr20:26040906-26041192	chr20	+	26040910	26041184	True	NR_003678,NR_026713	chr20,chr20	-,+	C20orf191,FAM182A	53543,-5711
chr20:26040906-26041192	chr20	-	25775992	25776266	False	NR_004846,NR_027061,NR_026714	chr20,chr20,chr20	+,-,-	LOC100134868,FAM182B,FAM182B	214168,662,5711
chr2:191040243-191041114	chr2	+	191040247	191041034	True	NM_001042519,NM_005259,NM_032321	chr2,chr2,chr2	+,-,+	C2orf88,MSTN,C2orf88	4554,-112792,4646
chr8:101157082-101157820	chr8	+	101157271	101157715	True	NM_001029860,NR_036491,NM_005034	chr8,chr8,chr8	-,-,+	FBXO43,FBXO43,POLR2K	434,434,5123
chr1:9189698-9190061	chr1	+	9189854	9190054	True	NM_004285,NM_024980	chr1,chr1	+,-	H6PD,GPR157	104808,-625
chr8:28742848-28744820	chr8	+	28743078	28744768	True	NM_001172562,NM_024567,NR_026826,NM_001135726,NM_018250,NM_001145159	chr8,chr8,chr8,chr8,chr8,chr8	-,+,-,+,-,-	INTS9,HMBOX1,INTS9,HMBOX1,INTS9,INTS9	2716,3456,2982,3142,2982,2982
chr5:170814535-170815085	chr5	+	170814578	170815132	True	NM_002520,NM_199185,NR_037474,NM_001037738	chr5,chr5,chr5,chr5	+,+,-,+	NPM1,NPM1,MIR3912,NPM1	17,17,-814,17
chr9:504186-504435	chr9	+	504236	504326	True	NM_152569,NM_015158	chr9,chr9	-,+	C9orf66,KANK1	-288343,376
chr15:57879038-57879251	chr15	+	57879037	57879263	True	NM_152451,NM_001018100,NM_001018091,NM_001018090,NM_170697	chr15,chr15,chr15,chr15,chr15	+,+,+,+,-	GCOM1,GCOM1,GCOM1,GCOM1,ALDH1A2	4838,4838,4838,4838,427028
chrX:1455263-1455985	chrY	+	1405331	1406021	False	NM_001636,NM_002183	chrY,chrY	-,+	SLC25A6,IL3RA	55068,-29
chrX:1455263-1455985	chrX	+	1455331	1456021	True	NM_001636,NM_002183	chrX,chrX	-,+	SLC25A6,IL3RA	55068,-29
chr8:12253946-12255505	chr8	+	12254253	12254974	True	NR_024044,NR_026789	chr8,chr8	-,+	DEFB109P1,FAM66A	2950,-34779
chr8:12253946-12255505	chr8	+	12011931	12012652	False	NM_201402,NR_027425	chr8,chr8	-,+	USP17L2,FAM66D	-15662,-38694
chr1:64680886-64681334	chr1	+	64681051	64681301	True	NM_152489,NM_014288	chr1,chr1	+,-	UBE2U,ITGB3BP	-11622,-692216
chr1:32404171-32404848	chr1	+	32404292	32404700	True	NM_006559,NM_080391	chr1,chr1	+,-	KHDRBS1,PTP4A2	74790,-304
chr1:28561250-28561940	chr1	+	28561649	28561849	True	NM_178191,NM_016311,NM_014280,NM_178190	chr1,chr1,chr1,chr1	+,+,-,+	ATPIF1,ATPIF1,DNAJC8,ATPIF1	752,752,-2107,752
chr8:37374019-37374655	chr8	+	37374038	37374713	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	178587,230910
chr1:236691194-236692601	chr1	+	236691356	236692191	True	NM_201545,NM_201544,NM_201543,NR_034040,NM_006499	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	LGALS8,LGALS8,LGALS8,LOC100287902,LGALS8	-9899,-4386,-4674,-3548,-4674
chr17:18760817-18761399	chr17	+	18761049	18761231	True	NM_002767,NM_001039999	chr17,chr17	+,-	PRPSAP2,FAM83G	260,146879
chr15:42448758-42449053	chr15	+	42448889	42449093	True	NM_198141,NM_213600,NR_033151	chr15,chr15,chr15	+,-,-	GANC,PLA2G4F,PLA2G4F	117272,-50,-50
chr6:97372511-97372845	chr6	+	97372560	97372876	True	NM_014165,NM_052904	chr6,chr6	-,+	NDUFAF4,KLHL32	-26793,-115
chr10:71210648-71211189	chr10	+	71210708	71211062	True	NM_001057,NM_012339	chr10,chr10	-,+	TACR2,TSPAN15	-34034,163
chr15:40680622-40682185	chr15	+	40681121	40682107	True	NM_001142762,NM_001142761,NM_207380,NM_033286	chr15,chr15,chr15,chr15	+,+,-,+	C15orf23,C15orf23,C15orf52,C15orf23	-6259,-6259,-47953,-6259
chr15:78563205-78564975	chr15	+	78563526	78564804	True	NM_001130182,NM_001130183,NM_018602,NM_025234	chr15,chr15,chr15,chr15	+,+,+,-	DNAJA4,DNAJA4,DNAJA4,WDR61	-6588,-5017,-7090,27186
chr7:50187579-50188462	chr7	+	50187667	50188391	True	NM_007009,NM_001161834	chr7,chr7	-,+	ZPBP,C7orf72	-54807,-52045
chr2:39663815-39664098	chr2	+	39663850	39664116	True	NR_037875,NM_003618	chr2,chr2	+,-	LOC728730,MAP4K3	440,153
chr20:31278669-31279420	chr20	+	31278767	31279250	True	NM_006892,NM_182584	chr20,chr20	+,-	DNMT3B,C20orf203	70940,-38984
chr20:62666179-62666390	chr20	+	62666248	62666434	True	NR_027687,NR_027686,NM_018419	chr20,chr20,chr20	+,+,-	NCRNA00176,NCRNA00176,SOX18	-602,-602,14595
chr10:105155348-105155692	chr10	+	105155401	105155689	True	NM_014976,NR_031707,NM_032747	chr10,chr10,chr10	+,-,-	PDCD11,MIR1307,USMG5	722,-1243,584
chr13:19523773-19524060	chr13	+	19523782	19524032	True	NR_027995,NR_026852	chr13,chr13	-,+	LOC284232,LOC348021	-77673,58366
chrX:128788911-128789173	chrX	+	128788948	128789014	True	NM_017413,NM_003399	chrX,chrX	-,+	APLN,XPNPEP2	-15,83931
chr11:60229204-60229883	chr11	+	60229373	60229919	True	NM_021950,NM_022349,NM_152866	chr11,chr11,chr11	+,-,+	MS4A1,MS4A6A,MS4A1	-6143,-278699,-6143
chr1:48235847-48237518	chr1	+	48235995	48237327	True	NM_001194986,NM_004474	chr1,chr1	-,+	LOC388630,FOXD2	225285,-334357
chr10:18096843-18097430	chr10	+	18096924	18097097	True	NM_002438,NM_014241,NM_001009567	chr10,chr10,chr10	+,-,+	MRC1,PTPLA,MRC1L1	1254,-437551,1254
chr10:18096843-18097430	chr10	+	17849934	17850107	False	NM_002438,NM_014241,NM_001009567	chr10,chr10,chr10	+,-,+	MRC1,PTPLA,MRC1L1	1254,-190561,1254
chr3:38083193-38084137	chr3	+	38083418	38084048	True	NM_006225,NM_007335,NM_007337	chr3,chr3,chr3	-,+,+	PLCD1,DLEC1,DLEC1	-12264,-2783,-2783
chr5:39416797-39417241	chr5	+	39416820	39417126	True	NM_001343,NM_003999	chr5,chr5	-,+	DAB2,OSMR	8259,-570771
chr6:149640346-149641303	chr6	+	149640391	149641145	True	NM_207360,NM_015093	chr6,chr6	-,+	ZC3H12D,TAB2	165059,-1015
chr14:20146722-20147051	chr22	+	16414508	16414762	False	NM_001005239,NR_001591	chr22,chr22	-,+	OR11H1,psiTPTE22	35092,668038
chr14:20146722-20147051	chr14	+	20146801	20147065	True	NM_001197287,NM_172194	chr14,chr14	-,+	OR11H2,OR4Q3	35476,68521
chr14:20146722-20147051	chr14	-	19412629	19412883	False	NM_001145442,NM_001013354	chr14,chr14	-,+	POTEM,OR11H12	607442,-35086
chr15:30485936-30486167	chr15	+	30486022	30486088	True	NR_026771,NM_139320	chr15,chr15	+,-	DKFZP434L187,CHRFAM7A	2150,199826
chr15:30485936-30486167	chr15	-	32636984	32637050	False	NR_026859,NM_199357	chr15,chr15	-,+	FAM7A3,ARHGAP11A	90065,270640
chr6:33284750-33285391	chr6_qbl_hap6	+	4517037	4517362	False	NM_001145338,NM_001350,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	655,5731,5731,-27445,448,-2627,-2627,-2627,5731
chr6:33284750-33285391	chr6_mcf_hap5	+	4758533	4758858	False	NM_001145338,NM_001350,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	655,5728,5728,-27440,448,-2627,-2627,-2627,5728
chr6:33284750-33285391	chr6_cox_hap2	+	4728603	4728928	False	NM_001145338,NM_001350,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	657,5734,5734,-27440,450,-2627,-2627,-2627,5734
chr6:33284750-33285391	chr6	+	33284791	33285116	True	NM_001145338,NM_001350,NR_024517,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	654,5728,5728,5728,-27442,447,-2627,-2627,-2627,5728
chr6:33284750-33285391	chr6_dbb_hap3	+	4566114	4566439	False	NM_001145338,NM_001350,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	655,5732,5732,-27439,448,-2627,-2627,-2627,5732
chr9:130466097-130467437	chr9	+	130466163	130467475	True	NM_001002913,NM_001012502	chr9,chr9	-,+	PTRH1,C9orf117	10511,1795
chr22:22306749-22307060	chr22	+	22306810	22307036	True	NM_148176,NM_014634	chr22,chr22	+,-	PPIL2,PPM1F	-286588,264
chr10:95322564-95323348	chr10	+	95322635	95323385	True	NM_001195755,NM_181745,NM_006744	chr10,chr10,chr10	+,+,-	O3FAR1,O3FAR1,RBP4	3036,3036,37658
chr2:71008267-71010112	chr2	+	71008288	71009720	True	NM_001004311,NM_012476	chr2,chr2	-,+	FIGLA,VAX2	8105,117999
chrX:26769667-26770354	chrX	+	26769666	26770244	True	NR_001559,NR_002784	chrX,chrX	+,-	VENTXP1,SMEK3P	-193263,711273
chr19:49340161-49340429	chr19	+	49340183	49340426	True	NM_014330,NM_016246	chr19,chr19	+,-	PPP1R15A,HSD17B14	35222,-249
chr17:45897176-45898551	chr17	+	45897187	45898589	True	NM_145798,NM_033413	chr17,chr17	-,+	OSBPL7,LRRC46	608,10403
chr8:12992255-12992568	chr8	+	12992317	12992563	True	NM_001099677,NM_006094	chr8,chr8	+,-	KIAA1456,DLC1	-122602,-1508
chr3:10147288-10148317	chr3	+	10147504	10148304	True	NM_173472,NM_018462,NM_001164839	chr3,chr3,chr3	-,+,-	C3orf24,C3orf10,C3orf24	1662,9028,1662
chr4:31999196-31999998	chr4	+	31999427	31999842	True	NM_015230,NM_032457	chr4,chr4	-,+	ARAP2,PCDH7	4246200,-1277448
chr3:186498992-186500668	chr3	+	186499241	186500559	True	NR_002989,NM_001967,NR_002588,NR_031650,NM_002916,NR_002587,NR_002586	chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,-,+,+	SNORA81,EIF4A2,SNORA4,MIR1248,RFC4,SNORD2,SNORA63	3904,801,4842,3901,23781,2025,4528
chr17:41364461-41365166	chr17	+	41364492	41365190	True	NM_007300,NM_145041	chr17,chr17	-,+	BRCA1,TMEM106A	-86992,-649
chr17:79979275-79979626	chr17	+	79979309	79979673	True	NM_005052,NM_144998,NM_144999	chr17,chr17,chr17	+,-,+	RAC3,STRA13,LRRC45	9858,1150,1606
chr19:45409095-45409577	chr19	+	45409323	45409539	True	NM_145288,NM_001645,NM_000041	chr19,chr19,chr19	-,+,+	ZNF296,APOC1,APOE	170199,8381,-335
chr10:75546995-75547931	chr10	+	75547002	75547926	True	NM_015037,NM_003635,NM_203298	chr10,chr10,chr10	+,-,+	KIAA0913,NDST2,CHCHD1	-1448,23713,-5245
chr7:44647593-44647826	chr7	+	44647669	44647733	True	NM_182547,NM_001003941,NM_001165036,NM_002541	chr7,chr7,chr7,chr7	-,+,+,+	TMED4,OGDH,OGDH,OGDH	-25842,-1606,-1606,-1606
chr15:30688002-30688207	chr15	+	30688116	30688254	True	NM_148911,NM_139320,NR_026858	chr15,chr15,chr15	-,-,+	CHRFAM7A,CHRFAM7A,FAM7A1	-2252,-2252,176503
chr15:30688002-30688207	chr15	+	32729465	32729603	False	NR_027470,NR_026859,NR_026858,NM_199357	chr15,chr15,chr15,chr15	-,-,-,+	FAM7A2,FAM7A3,FAM7A1,ARHGAP11A	-2215,-2400,-2215,178087
chr15:30688002-30688207	chr15	-	30393397	30393535	False	NR_026859,NM_175610	chr15,chr15	+,-	FAM7A3,TJP1	2399,-278691
chr15:30688002-30688207	chr15	-	30862394	30862532	False	NR_027470,NM_148911,NR_026858	chr15,chr15,chr15	+,-,+	FAM7A2,CHRFAM7A,FAM7A1	2225,-176530,2225
chr16:71493925-71495605	chr16	+	71493960	71495531	True	NM_145911,NM_005769	chr16,chr16	-,+	ZNF23,CHST4	638,64491
chr10:94819616-94819890	chr10	+	94819644	94819920	True	NM_013451,NM_183374	chr10,chr10	-,+	MYOF,CYP26C1	422204,1100
chr20:30865720-30866376	chr20	+	30865956	30866362	True	NM_002657,NM_004798	chr20,chr20	-,+	PLAGL2,KIF3B	-70410,-558
chr19:49534486-49534955	chr19	+	49534701	49534990	True	NR_024244,NM_033378,NM_033377,NR_004383,NM_000737	chr19,chr19,chr19,chr19,chr19	-,+,-,+,-	SNAR-G2,CGB2,CGB1,SNAR-G1,CGB	104,139,5251,5286,-7108
chr19:49534486-49534955	chr19	-	49540571	49540631	False	NR_004383,NM_033378,NM_033377,NR_024244,NM_033043	chr19,chr19,chr19,chr19,chr19	+,+,-,-,+	SNAR-G1,CGB2,CGB1,SNAR-G2,CGB5	-345,-5492,-380,-5527,6470
chr10:76970832-76971139	chr10	+	76970911	76970975	True	NM_001184783,NM_001184823,NM_144589,NM_003375,NR_033675	chr10,chr10,chr10,chr10,chr10	+,+,-,+,+	VDAC2,VDAC2,COMTD1,VDAC2,VDAC2	-662,-1050,24845,-662,-662
chr15:101084209-101084731	chr15	+	101084363	101084473	True	NM_024708,NM_178842	chr15,chr15	+,-	ASB7,LASS3	58281,502
chr12:11005758-11006178	chr12	+	11005763	11006145	True	NM_007244,NM_001098538,NM_005042	chr12,chr12,chr12	-,-,+	PRR4,PRR4,PRH2	-3688,-3688,75688
chr1:20142762-20144640	chr1	+	20142795	20144395	True	NM_015207,NM_019062	chr1,chr1	+,-	OTUD3,RNF186	64492,-1024
chrX:44602069-44602578	chrX	+	44602121	44602607	True	NM_022076,NM_173794	chrX,chrX	+,-	DUSP21,FUNDC1	100641,-199900
chr14:90042206-90042599	chr14	+	90042276	90042616	True	NM_001085471,NR_024620	chr14,chr14	-,+	FOXN3,PRO1768	42928,-57
chr14:24711170-24711382	chr14	+	24711173	24711403	True	NM_001199823,NM_006156,NM_001099274,NM_001002001,NM_001002000,NM_001002002,NM_016576,NM_012461	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	-,-,-,+,+,+,+,-	NEDD8-MDP1,NEDD8,TINF2,GMPR2,GMPR2,GMPR2,GMPR2,TINF2	-9597,-9597,527,-9576,-9576,-9121,-9121,527
chr17:8199400-8200192	chr17	+	8199522	8199955	True	NM_016492,NM_001177802,NM_201520,NM_001177801	chr17,chr17,chr17,chr17	+,+,-,+	RANGRF,RANGRF,SLC25A35,RANGRF	-7616,-7616,-1352,-7616
chr13:45492687-45492950	chr13	+	45492737	45492925	True	NM_012345,NM_018559	chr13,chr13	-,+	NUFIP1,KIAA1704	70738,70761
chr11:56151396-56152867	chr11	+	56151449	56152354	True	NM_001004744,NM_001005204,NM_001013356	chr11,chr11,chr11	-,+,+	OR5R1,OR8U1,OR8U8	33413,-8412,-8412
chr10:64893606-64894674	chr10	+	64893857	64894649	True	NM_004241,NM_030759	chr10,chr10	-,+	JMJD1C,NRBF2	134386,-912
chr1:161477730-161478232	chr1	+	161477903	161478087	True	NM_000569,NM_021642,NM_001136219	chr1,chr1,chr1	-,+,+	FCGR3A,FCGR2A,FCGR2A	41789,-2760,-2760
chr7:105026967-105028381	chr7	+	105027235	105028225	True	NM_182692,NM_021930	chr7,chr7	-,+	SRPK2,RINT1	1177,144306
chr7:133832042-133832737	chr7	+	133832206	133832522	True	NM_032826,NM_144648	chr7,chr7	-,+	SLC35B4,LRGUK	169359,-20161
chr3:128903758-128904098	chr3	+	128903772	128903908	True	NM_001127195,NM_001127194,NM_001127196,NM_001127193,NM_001127192,NM_016128,NM_003418	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,-,+,-	CNBP,CNBP,CNBP,CNBP,CNBP,COPG,CNBP	-962,-962,-962,-962,-962,64544,-962
chr12:132853113-132853707	chr12	+	132853149	132853692	True	NM_001122636,NR_024563	chr12,chr12	-,+	GALNT9,LOC100130238	52264,-1223
chr11:14633164-14634456	chr11	+	14633223	14634411	True	NM_148976,NM_000922	chr11,chr11	-,+	PSMA1,PDE3B	30819,30857
chr21:36091871-36093804	chr21	+	36091933	36093789	True	NM_004414,NR_024351	chr21,chr21	-,+	RCAN1,NCRNA00160	-104551,2315
chr1:230516272-230517473	chr1	+	230516357	230517410	True	NM_001145036,NM_024554	chr1,chr1	+,-	COG2,PGBD5	260791,-2966
chr2:218937980-218938845	chr2	+	218937995	218938479	True	NM_198483,NR_002712	chr2,chr2	+,-	RUFY4,CXCR2P1	-4308,-11982
chr6:150347921-150348922	chr6	+	150348006	150348860	True	NM_025218,NM_130900	chr6,chr6	+,-	ULBP1,RAET1L	-62914,-1338
chr11:118889448-118889811	chr11	+	118889468	118889670	True	NM_016146,NM_001028,NR_037429	chr11,chr11,chr11	+,-,+	TRAPPC4,RPS25,MIR3656	-278,-411,5
chr5:145895602-145896143	chr5	+	145895664	145896149	True	NM_006706,NM_194251	chr5,chr5	+,-	TCERG1,GPR151	-68853,12
chr17:44666334-44666790	chr17_ctg5_hap1	+	1523266	1523485	False	NM_016632	chr17_ctg5_hap1	-	ARL17A	-9382
chr17:44666334-44666790	chr17_ctg5_hap1	-	381982	382201	False	NM_006178,NM_001113738,NM_001039083,NM_016632,NM_001103154,NR_033799	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	-,+,+,+,+,-	NSF,ARL17A,ARL17B,ARL17A,ARL17B,NSFP1	-1367,9381,9410,9381,9410,-1429
chr17:44666334-44666790	chr17	+	44666451	44666670	True	NM_001113738,NM_006178,NM_016632,NR_033799	chr17,chr17,chr17,chr17	-,+,-,+	ARL17A,NSF,ARL17A,NSFP1	-9363,1367,-9363,1429
chr17:44666334-44666790	chr17	+	44448533	44448752	False	NM_001039083,NM_001113738,NM_001103154,NR_033799,NM_016632	chr17,chr17,chr17,chr17,chr17	-,-,-,+,-	ARL17B,ARL17A,ARL17B,NSFP1,ARL17A	-9399,-9370,-9399,1426,-9370
chr10:47174607-47174903	chr10	+	47174890	47174952	True	NM_001137549,NM_001137548,NM_005972,NM_001137556,NM_001098845,NM_001040084	chr10,chr10,chr10,chr10,chr10,chr10	-,-,+,-,-,-	FAM25G,FAM25C,PPYR1,FAM25B,ANXA8L1,ANXA8	6786,6786,-91407,6786,-850,-768
chr10:47174607-47174903	chr10	+	49200708	49200760	False	NM_001137549,NM_001137548,NM_002750,NM_001137556	chr10,chr10,chr10,chr10	-,-,+,-	FAM25G,FAM25C,MAPK8,FAM25B	7115,7115,408926,7115
chr10:47174607-47174903	chr10	-	48254394	48254456	False	NM_001137549,NM_001137548,NM_001137556,NM_001098845,NM_001040084,NM_002900	chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,-	FAM25G,FAM25C,FAM25B,ANXA8L1,ANXA8,RBP3	-6783,-6783,-6783,850,768,136585
chr22:44567874-44568193	chr22	+	44567878	44568232	True	NR_024426,NR_024427,NM_022141,NM_001099294,NM_001137605,NM_001137606,NR_024428	chr22,chr22,chr22,chr22,chr22,chr22,chr22	+,+,+,-,+,+,+	PARVG,PARVG,PARVG,KIAA1644,PARVG,PARVG,PARVG	8537,603,8537,140549,603,9024,8983
chr8:72242129-72243185	chr8	+	72242199	72242963	True	NM_172058,NR_033652	chr8,chr8	-,+	EYA1,LOC100132891	26078,512394
chr20:35399312-35400936	chr20	+	35399369	35400679	True	NM_080628,NM_024918,NM_001145317,NM_001145316,NM_001145315,NM_001145318	chr20,chr20,chr20,chr20,chr20,chr20	+,-,-,-,-,-	C20orf118,DSN1,DSN1,DSN1,DSN1,DSN1	103890,1525,1601,1525,1601,1601
chr14:90205442-90207006	chr14	+	90205902	90207022	True	NR_024620,NM_001085471	chr14,chr14	+,-	PRO1768,FOXN3	-163399,-120408
chr20:35584413-35584890	chr20	+	35584606	35584844	True	NM_015474,NM_080628	chr20,chr20	-,+	SAMHD1,C20orf118	-4360,-80087
chr17:8079121-8079517	chr17	+	8079176	8079562	True	NM_032354,NM_183065,NR_037447	chr17,chr17,chr17	-,-,+	TMEM107,TMEM107,MIR3676	202,202,10930
chr13:46624283-46624587	chr13	+	46624356	46624624	True	NM_015070,NM_152719	chr13,chr13	-,+	ZC3H13,SPERT	2328,-347970
chr17:12690419-12692083	chr17	+	12691009	12692130	True	NM_014859,NM_001165962	chr17,chr17	+,-	ARHGAP44,ELAC2	698,229301
chr11:2714756-2715005	chr11	+	2714769	2714875	True	NR_024627,NR_002728	chr11,chr11	+,-	KCNQ1DN,KCNQ1OT1	176387,6403
chr21:43735739-43736734	chr21	+	43735970	43736780	True	NM_003226,NM_001001895	chr21,chr21	-,+	TFF3,UBASH3A	-264,87238
chr9:140100648-140100915	chr9	+	140100648	140100964	True	NM_001144028,NM_001128228,NM_001144026,NM_001144027,NM_053045,NM_014434	chr9,chr9,chr9,chr9,chr9,chr9	+,-,+,+,-,+	NDOR1,TPRN,NDOR1,NDOR1,TMEM203,NDOR1	-580,-5485,-580,-580,-558,-580
chr4:2262276-2262634	chr4	+	2262282	2262502	True	NM_001193282,NM_006454	chr4,chr4	+,-	LOC402160,MXD4	158198,1287
chr8:6873076-6874272	chr8	+	6873087	6874122	True	NM_005217,NR_036686,NR_036687,NM_001164452,NM_001042500,NM_004084	chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,+,-,-	DEFA3,DEFT1P,DEFT1P2,FAM90A14,DEFA1B,DEFA1	1745,-6741,-6741,240303,1752,1752
chr8:6873076-6874272	chr8	+	6835085	6835906	False	NM_001042500,NM_018361,NM_004084,NR_029386	chr8,chr8,chr8,chr8	-,+,-,-	DEFA1B,AGPAT5,DEFA1,DEFA10P	1759,-269268,1759,-8450
chr8:6873076-6874272	chr8	+	6854202	6855023	False	NM_001042500,NM_004084,NM_001164452,NR_036687,NR_036686	chr8,chr8,chr8,chr8,chr8	-,-,+,-,-	DEFA1B,DEFA1,FAM90A14,DEFT1P2,DEFT1P	1752,1752,259402,-6959,-6959
chr1:112084904-112085409	chr1	+	112085043	112085303	True	NM_001081976,NM_174896	chr1,chr1	-,+	ADORA3,C1orf162	21352,-68490
chr22:45901146-45901941	chr22	+	45901145	45901985	True	NM_001996,NM_006485,NM_006487,NM_006486,NM_148674	chr22,chr22,chr22,chr22,chr22	+,+,+,+,-	FBLN1,FBLN1,FBLN1,FBLN1,SMC1B	-2477,-2477,-2477,-2477,-91645
chr1:150292085-150292855	chr1	+	150292291	150292853	True	NM_004698,NM_016022	chr1,chr1	+,-	PRPF3,APH1A	1074,-50759
chr17:40813687-40815359	chr17	+	40813883	40815297	True	NM_024927,NM_016437	chr17,chr17	-,+	PLEKHH3,TUBG2	13803,-2668
chr2:10441789-10442225	chr2	+	10441799	10442241	True	NM_134421,NM_002149,NR_036222	chr2,chr2,chr2	+,+,-	HPCAL1,HPCAL1,MIR4261	1584,798,-109002
chr19:33555630-33555984	chr19	+	33555665	33556016	True	NM_033103,NM_018025	chr19,chr19	-,+	RHPN2,GPATCH1	-142,15769
chr7:66765779-66766282	chr7	+	66765788	66766072	True	NM_022906,NR_022007	chr7,chr7	+,-	STAG3L4,PMS2P4	1543,1390
chr1:236274264-236274509	chr1	+	236274328	236274508	True	NM_002508,NM_003272	chr1,chr1	-,+	NID1,GPR137B	-45847,31323
chr2:234194979-234196243	chr2	+	234195137	234196136	True	NR_003006,NM_018218	chr2,chr2	+,-	SCARNA6,USP40	1185,278157
chr16:70571326-70572476	chr16	+	70571536	70572507	True	NR_003696,NM_015386,NR_003079,NR_037420	chr16,chr16,chr16,chr16	+,-,+,+	SNORD111B,COG4,SNORD111,MIR3647	-8189,-14079,19,-8192
chr15:91260901-91262313	chr15	+	91261135	91262114	True	NM_198527,NM_000057	chr15,chr15	-,+	HDDC3,BLM	213710,-607
chr19:3223333-3224394	chr19	+	3223704	3224360	True	NM_001172673,NM_198969,NM_021938,NR_033342	chr19,chr19,chr19,chr19	+,-,+,+	CELF5,AES,CELF5,CELF5	341,-160740,340,1122
chr15:65491615-65491880	chr15	+	65491621	65491889	True	NM_001101362,NM_003613	chr15,chr15	+,-	KBTBD13,CILP	-122518,12001
chr17:40308219-40309289	chr17	+	40308287	40309199	True	NM_004583,NM_201434,NM_033194	chr17,chr17,chr17	-,-,+	RAB5C,RAB5C,HSPB9	-1265,-1265,-33582
chr22:22652002-22652224	chr22	+	22652002	22652268	True	NM_080764,NR_027293	chr22,chr22	-,+	ZNF280B,LOC96610	211287,194
chr5:70363704-70364120	chr5	+	70363708	70364013	True	NM_022877,NM_001515	chr5,chr5	+,-	SMN2,GTF2H2	-142991,-211
chr5:70363704-70364120	chr5	-	68855656	68855842	False	NR_027439,NM_001042490,NM_001098728	chr5,chr5,chr5	-,+,+	LOC100272216,GTF2H2D,GTF2H2C	73236,231,208
chr5:70363704-70364120	chr5	-	69710684	69710989	False	NR_033417,NR_033968	chr5,chr5	+,-	GTF2H2B,LOC100049076	207,140211
chr1:207224332-207225422	chr1	+	207224368	207225444	True	NM_001018053,NM_018566,NM_006212	chr1,chr1,chr1	+,-,+	PFKFB2,YOD1,PFKFB2	1175,54,1175
chr9:130549109-130550087	chr9	+	130549195	130549993	True	NM_001261,NM_170600,NR_036055	chr9,chr9,chr9	+,-,+	CDK9,SH2D3C,MIR2861	-943,-8147,-1051
chr2:47798275-47798546	chr2	+	47798311	47798481	True	NM_022055,NM_000251	chr2,chr2	-,+	KCNK12,MSH2	-841,-168099
chr13:39610577-39611075	chr13	+	39610580	39611104	True	NM_001012754,NM_025138,NM_170719,NM_001017370	chr13,chr13,chr13,chr13	+,-,-,+	NHLRC3,C13orf23,C13orf23,NHLRC3	1350,1198,1198,1350
chr22:39436521-39436955	chr22	+	39436868	39436982	True	NM_145298,NM_001006666,NM_175709	chr22,chr22,chr22	+,+,-	APOBEC3F,APOBEC3F,CBX7	-246,-246,111606
chr22:39436521-39436955	chr22	+	39473305	39473383	False	NM_021822,NM_175709	chr22,chr22	+,-	APOBEC3G,CBX7	-346,75205
chr14:102977846-102978637	chr14	+	102977879	102978534	True	NM_152326,NR_036192	chr14,chr14	-,+	ANKRD9,MIR4309	-1751,27446
chr5:176981320-176981572	chr5	+	176981410	176981498	True	NM_001190946,NM_017510,NR_024019	chr5,chr5,chr5	-,+,-	FAM193B,TMED9,FAM193B	100,37714,100
chr6:11567480-11568099	chr6	+	11567506	11568056	True	NM_001142393,NM_001100829	chr6,chr6	-,+	NEDD9,TMEM170B	-184925,-29046
chr14:36990080-36990354	chr14	+	36990103	36990217	True	NM_003317,NM_006194,NM_001101341,NM_001079668	chr14,chr14,chr14,chr14	-,+,-,-	NKX2-1,PAX9,SFTA3,NKX2-1	-1200,136555,-7113,-673
chr1:176173986-176175821	chr1	+	176174130	176175746	True	NM_021936,NM_001001740,NM_022457	chr1,chr1,chr1	+,-,-	PAPPA2,RFWD2,RFWD2	256560,674,674
chr19:2867896-2868218	chr19	+	2867920	2868214	True	NM_021217,NM_024967	chr19,chr19	-,+	ZNF77,ZNF556	76805,-638
chr9:7478057-7478354	chr9	+	7478121	7478337	True	NM_033428,NM_015061	chr9,chr9	-,+	C9orf123,KDM4C	321512,-720531
chr6:74406246-74406815	chr6	+	74406301	74406816	True	NM_001159587,NM_012434,NM_133493,NM_001159588	chr6,chr6,chr6,chr6	+,-,+,+	CD109,SLC17A5,CD109,CD109	-857,-42564,-851,-857
chr1:204182733-204182955	chr1	+	204182781	204182989	True	NM_005686,NM_198447	chr1,chr1	+,-	SOX13,GOLT1A	-140586,281
chr19:2268395-2269088	chr19	+	2268421	2269076	True	NM_004152,NM_144616	chr19,chr19	+,-	OAZ1,JSRP1	443,-11999
chr15:43596059-43597327	chr15	+	43596102	43597132	True	NM_001012969,NM_052955	chr15,chr15	+,-	ADAL,TGM7	25739,-1649
chr1:116181487-116182558	chr1	+	116181622	116182266	True	NM_138959,NM_001232,NM_001172412,NM_001172411	chr1,chr1,chr1,chr1	+,-,+,+	VANGL1,CASQ2,VANGL1,VANGL1	2307,129210,2983,2307
chr8:145090962-145091988	chr8	+	145091098	145091949	True	NM_017570,NM_001134374,NM_198572	chr8,chr8,chr8	-,+,+	OPLAH,SPATC1,SPATC1	23689,-4567,-4567
chr5:172098273-172099160	chr5	+	172098341	172099180	True	NM_001142651,NM_004417	chr5,chr5	+,-	NEURL1B,DUSP1	-30116,99074
chr1:55111742-55112003	chr1	+	55111828	55112042	True	NR_026782,NR_037639,NM_001039464,NR_037640,NR_037641,NM_176782	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-	HEATR8,HEATR8-TTC4,HEATR8,HEATR8-TTC4,HEATR8-TTC4,FAM151A	-4452,-4452,-4452,-4452,-4452,-22628
chr16:776521-776760	chr16	+	776605	776757	True	NM_001031737,NM_023933,NM_032304	chr16,chr16,chr16	-,+,+	CCDC78,FAM173A,HAGHL	-132,-5498,508
chr17:15525041-15525592	chr17	+	15525230	15525616	True	NM_006382,NM_001130842	chr17,chr17	-,+	CDRT1,ZNF286A	-2212,77274
chr17:15525041-15525592	chr17	-	18644770	18645044	False	NM_001145045,NM_031456	chr17,chr17	-,+	ZNF286B,FBXW10	-59198,2281
chr9:84305501-84306621	chr9	+	84305511	84306603	True	NM_005077,NR_026851	chr9,chr9	-,+	TLE1,FAM75D5	-1915,221748
chr5:140811673-140812076	chr5	+	140811691	140811925	True	NM_005642,NR_001297,NM_032094,NM_003735	chr5,chr5,chr5,chr5	-,+,+,+	TAF7,PCDHGB8P,PCDHGA12,PCDHGA12	-111340,-5889,-1584,-1584
chr1:46913466-46913842	chr1	+	46913567	46913839	True	NM_001097611,NM_001441	chr1,chr1	-,+	KNCN,FAAH	103098,-53679
chrX:100641868-100642945	chrX	+	100641959	100642788	True	NM_000061,NM_021029,NM_001199974,NM_001199972,NM_001199973	chrX,chrX,chrX,chrX,chrX	-,+,+,+,+	BTK,RPL36A,RPL36A-HNRNPH2,RPL36A,RPL36A-HNRNPH2	-747,3089,3089,3089,3089
chr12:57870008-57871155	chr12	+	57870164	57871146	True	NM_032496,NM_004990,NM_001080157,NM_001080156	chr12,chr12,chr12,chr12	-,+,-,-	ARHGAP9,MARS,ARHGAP9,ARHGAP9	2537,10589,2328,632
chr4:25162714-25163344	chr4	+	25162845	25163383	True	NR_037934,NM_016955	chr4,chr4	+,-	LOC285540,SEPSECS	-602,-641
chr3:14166161-14166361	chr3	+	14166169	14166377	True	NM_144636,NM_001098502,NM_024334	chr3,chr3,chr3	-,-,+	CHCHD4,CHCHD4,TMEM43	44,44,62
chr8:24207443-24207982	chr8	+	24207472	24207826	True	NM_003155,NM_001145271	chr8,chr8	-,+	STC1,ADAMDEC1	-495152,33971
chr9:112551329-112551855	chr9	+	112551373	112551873	True	NM_053016,NM_007203,NM_002829,NM_147150	chr9,chr9,chr9,chr9	+,+,-,+	PALM2,PALM2-AKAP2,PTPN3,PALM2-AKAP2	-8847,-8847,-290780,-8847
chr6:290759-291695	chr6	+	290763	291546	True	NM_020185,NM_148959	chr6,chr6	+,-	DUSP22,HUS1B	554,365475
chr13:114056528-114056777	chr13	+	114056547	114056777	True	NM_024719,NM_017905	chr13,chr13	-,+	GRTP1,TMCO3	-38084,88530
chrX:15519814-15520372	chrX	+	15519925	15520386	True	NM_003662,NM_001018109,NM_001721,NM_203281	chrX,chrX,chrX,chrX	-,-,+,+	PIR,PIR,BMX,BMX	-8214,-8214,5044,-1077
chr22:38848602-38848846	chr22	+	38848602	38848662	True	NM_016657,NM_152868,NM_004981	chr22,chr22,chr22	+,-,-	KDELR3,KCNJ4,KCNJ4	15420,2591,-8569
chr2:71681535-71682604	chr2	+	71681744	71682620	True	NM_001130980,NM_001130981,NM_003494,NM_020459,NM_001130977,NM_001130976,NM_001130979,NM_001130978	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,-,+,+,+,+	DYSF,DYSF,DYSF,PAIP2B,DYSF,DYSF,DYSF,DYSF	-1042,-1042,-1042,-227511,-1042,-1042,-1042,-1042
chr14:73526167-73526905	chr14	+	73526167	73526654	True	NM_021239,NM_021260	chr14,chr14	+,-	RBM25,ZFYVE1	-1002,-32247
chr21:45607000-45607302	chr21	+	45607055	45607199	True	NM_198155,NM_015259	chr21,chr21	+,-	C21orf33,ICOSLG	-53612,53685
chr14:62162125-62162338	chr14	+	62162258	62162324	True	NM_001530,NM_001017970,NM_181054	chr14,chr14,chr14	+,-,+	HIF1A,TMEM30B,HIF1A	-190,-413728,-190
chr12:57120479-57120937	chr12	+	57120646	57120814	True	NM_001113202,NM_001113203,NM_005594,NM_001113201,NM_003725	chr12,chr12,chr12,chr12,chr12	-,-,-,-,+	NACA,NACA,NACA,NACA,HSD17B6	-1320,-1320,-1580,-1580,36293
chr17:46509017-46509713	chr17	+	46509077	46509417	True	NM_001075099,NR_033201,NM_003726	chr17,chr17,chr17	-,+,-	SKAP1,LOC404266,SKAP1	-1483,158405,-1483
chr9:130060324-130060616	chr9	+	130060323	130060405	True	NM_032293,NR_002449	chr9,chr9	+,-	GARNL3,SNORA65	-33618,150571
chr4:154665496-154666360	chr4	+	154665595	154666378	True	NM_173662,NM_003264	chr4,chr4	-,+	RNF175,TLR2	15060,-60205
chr9:120178196-120179579	chr9	+	120178265	120179451	True	NM_138554,NM_014010	chr9,chr9	+,-	TLR4,ASTN2	287008,-948
chr21:19731461-19732330	chr21	+	19731481	19732363	True	NM_002772,NM_001204174	chr21,chr21	-,+	TMPRSS15,CHODL	43658,-113340
chr7:100319564-100320701	chr7	+	100319571	100320701	True	NM_000799,NM_022574	chr7,chr7	+,-	EPO,GIGYF1	-1199,-32701
chr9:75571076-75572851	chr9	+	75571252	75572633	True	NM_000700,NM_000689	chr9,chr9	+,-	ANXA1,ALDH1A1	194147,-3019
chr14:64940816-64941877	chr14	+	64940820	64941716	True	NM_006977,NM_004857	chr14,chr14	-,+	ZBTB25,AKAP5	28888,-8654
chr1:207073665-207075398	chr1	+	207073962	207075422	True	NM_001185157,NM_001185156,NM_001185158,NM_006850,NM_001193338	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	IL24,IL24,IL24,IL24,FAIM3	-3227,-3227,-3227,-3227,19863
chr15:42119862-42120063	chr15	+	42119916	42120072	True	NR_036195,NM_001198588,NM_001114632,NM_005090	chr15,chr15,chr15,chr15	-,+,+,+	MIR4310,JMJD7-PLA2G4B,JMJD7,JMJD7-PLA2G4B	38727,210,210,210
chr5:179287370-179287595	chr5	+	179287377	179287545	True	NM_003900,NM_001017987,NM_016175	chr5,chr5,chr5	+,-,-	SQSTM1,C5orf45,C5orf45	-39586,-1537,-1537
chr1:45241073-45241371	chr1	+	45241136	45241254	True	NR_001456,NR_001457,NM_153274,NR_000024,NR_000015,NM_001012	chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,+,+,+	SNORD38A,SNORD38B,BEST4,SNORD46,SNORD55,RPS8	2259,2807,12222,909,282,-9
chr4:472849-473083	chr4	+	472923	473097	True	NR_002451,NM_001127178	chr4,chr4	-,+	ABCA11P,PIGG	-4925,19891
chr6:10521816-10522279	chr6	+	10521898	10522086	True	NM_145649,NR_027793	chr6,chr6	+,-	GCNT2,C6orf218	-388,-86843
chr4:48033371-48033914	chr4	+	48033426	48033770	True	NM_000087,NM_207330	chr4,chr4	-,+	CNGA1,NIPAL1	-18465,-14692
chr12:6233715-6234255	chr12	+	6233888	6234292	True	NM_001769,NM_000552	chr12,chr12	+,-	CD9,VWF	75189,-52
chr16:58550176-58550396	chr16	+	58550182	58550380	True	NM_001160305,NR_002978,NM_024860	chr16,chr16,chr16	+,-,+	SETD6,SNORA46,SETD6	-850,32207,-850
chr12:66217985-66218276	chr12	+	66217995	66218313	True	NM_003483,NR_026825,NM_003484	chr12,chr12,chr12	+,-,+	HMGA2,RPSAP52,HMGA2	-68,2491,-68
chr13:39612801-39613200	chr13	+	39612832	39613206	True	NM_001012754,NM_025138,NM_170719,NM_001017370	chr13,chr13,chr13,chr13	+,-,-,+	NHLRC3,C13orf23,C13orf23,NHLRC3	-428,-580,-580,-428
chr11:125492774-125494319	chr11	+	125493049	125493836	True	NM_001114122,NM_001114121,NM_001274,NM_001612	chr11,chr11,chr11,chr11	+,+,+,-	CHEK1,CHEK1,CHEK1,ACRV1	1199,1199,2475,57014
chrX:55041179-55042074	chrX	+	55041231	55042019	True	NM_014481,NM_000032	chrX,chrX	+,-	APEX2,ALAS2	-14502,15528
chr18:9137649-9137986	chr18	+	9137695	9138035	True	NM_001204056,NM_001083625,NM_001042388,NM_015208	chr18,chr18,chr18,chr18	+,+,-,+	ANKRD12,ANKRD12,PPP4R1,ANKRD12	-185,-995,476615,-995
chr17:1092149-1092366	chr17	+	1092248	1092404	True	NM_001164405,NM_021962,NM_001159746	chr17,chr17,chr17	+,-,-	BHLHA9,ABR,ABR	81453,-9117,-1632
chr19:51628060-51628416	chr19	+	51628072	51628424	True	NM_145232,NM_001198558,NM_014441	chr19,chr19,chr19	-,+,+	CTU1,SIGLEC9,SIGLEC9	-16425,14,14
chr1:27559435-27560048	chr1	+	27559434	27560046	True	NM_015023,NM_003047	chr1,chr1	+,-	WDTC1,SLC9A1	960,-77983
chr17:61629811-61631352	chr17	+	61629872	61630985	True	NM_005828,NM_001915	chr17,chr17	+,-	DCAF7,CYB561	-2110,-106150
chr19:48307890-48308206	chr19	+	48307931	48307995	True	NM_198479,NM_000554	chr19,chr19	-,+	TPRX1,CRX	-1070,17103
chr19:46086703-46086947	chr19	+	46086702	46086775	True	NM_003370,NM_001017989,NM_025136	chr19,chr19,chr19	+,-,-	VASP,OPA3,OPA3	-76065,1397,1397
chr16:75035346-75036642	chr16	+	75035698	75036642	True	NM_030581,NM_032268	chr16,chr16	-,+	WDR59,ZNRF1	-16681,-2834
chr3:119510481-119511361	chr3	+	119510610	119511362	True	NM_005694,NM_022002	chr3,chr3	-,+	COX17,NR1I2	-114367,-9105
chr17:58042909-58043206	chr17	+	58043006	58043075	True	NM_003161,NM_016125	chr17,chr17	+,-	RPS6KB1,RNFT1	-72615,-889
chr14:50319134-50319357	chr14	+	50319237	50319365	True	NM_004713,NM_001663	chr14,chr14	-,+	NEMF,ARF6	224,40370
chr19:49538166-49538874	chr19	+	49538700	49538802	True	NR_004383,NM_033378,NM_033377,NR_024244,NM_033043	chr19,chr19,chr19,chr19,chr19	+,+,-,-,+	SNAR-G1,CGB2,CGB1,SNAR-G2,CGB5	1474,-3621,1439,-3656,8299
chr19:49538166-49538874	chr19	-	49536570	49536620	False	NR_024244,NM_033378,NM_033377,NR_004383,NM_000737	chr19,chr19,chr19,chr19,chr19	-,+,-,+,-	SNAR-G2,CGB2,CGB1,SNAR-G1,CGB	-1526,-1491,3621,3656,-8977
chr19:49538166-49538874	chr19	+	49550767	49550817	False	NM_033183,NM_033142,NM_033043	chr19,chr19,chr19	-,-,+	CGB8,CGB7,CGB5	1601,8230,-3716
chr2:2328438-2328827	chr2	+	2328462	2328866	True	NR_024468,NM_015025	chr2,chr2	+,-	LOC730811,MYT1L	-5509,6229
chr7:155328003-155328247	chr7	+	155328063	155328293	True	NM_001103176,NM_001427	chr7,chr7	-,+	CNPY1,EN2	-1524,-77290
chrX:117078164-117078434	chrX	+	117078207	117078492	True	NM_033495,NM_001184965	chrX,chrX	-,+	KLHL13,WDR44	29268,401543
chr1:28051046-28051616	chr1	+	28051169	28051589	True	NM_152660,NM_022873,NM_001143915,NM_001143914,NM_001143913,NM_001143912	chr1,chr1,chr1,chr1,chr1,chr1	+,-,+,+,+,+	FAM76A,IFI6,FAM76A,FAM76A,FAM76A,FAM76A	900,-52445,900,900,900,900
chr17:27231600-27231920	chr17	+	27231668	27231917	True	NM_144683,NM_005702,NM_004475	chr17,chr17,chr17	-,+,-	DHRS13,ERAL1,FLOT2	-1579,-49676,-6953
chr7:128861633-128862131	chr7	+	128861718	128862086	True	NM_001130720,NM_015328,NR_034053	chr7,chr7,chr7	+,+,-	AHCYL2,AHCYL2,TNPO3	2768,2768,-166491
chr1:32285183-32287037	chr1	+	32285367	32286920	True	NM_144569,NM_006559	chr1,chr1	-,+	SPOCD1,KHDRBS1	-3787,192570
chr19:57872804-57873253	chr19	+	57872898	57873270	True	NM_173631,NR_002166,NM_020633	chr19,chr19,chr19	+,+,-	ZNF547,TRAPPC2P1,VN1R1	1620,1608,94887
chr14:24616483-24616743	chr14	+	24616516	24616745	True	NM_017999,NM_016049,NM_002818	chr14,chr14,chr14	+,-,-	RNF31,FAM158A,PSME2	44,-5719,-661
chr17:73840303-73840820	chr17	+	73840325	73840589	True	NM_199242,NM_001080419	chr17,chr17	-,+	UNC13D,UNK	259,-59695
chr11:59270407-59271824	chr11	+	59270655	59271729	True	NM_001001954,NM_001004706	chr11,chr11	-,+	OR5A2,OR4D11	-80229,49
chr1:10056292-10057146	chr1	+	10056435	10057048	True	NM_032368,NM_052960	chr1,chr1	-,+	LZIC,RBP7	-53609,206
chr14:52118242-52118649	chr14	+	52118278	52118494	True	NR_037676,NM_152330	chr14,chr14	-,+	C14orf82,FRMD6	18,81
chr5:180633927-180634129	chr5	+	180633926	180634150	True	NM_203295,NM_203294,NM_203297,NM_203296,NM_033342,NM_203293,NM_033549	chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,-,-,+	TRIM7,TRIM7,TRIM7,TRIM7,TRIM7,TRIM7,TRIM41	-2586,-2586,-5996,-2586,-1749,-1749,16155
chrY:9746830-9747573	chrY	+	9746993	9747601	True	NR_001540,NR_003593,NR_003589	chrY,chrY,chrY	+,+,-	TTTY23,TTTY23B,TTTY1B	805,805,-135065
chrY:9746830-9747573	chrY	-	6112456	6113064	False	NM_022573,NR_001540,NR_003593	chrY,chrY,chrY	+,-,-	TSPY2,TTTY23,TTTY23B	1199,-805,-805
chr1:230853526-230854732	chr1	+	230853529	230854280	True	NM_000029,NM_006615	chr1,chr1	-,+	AGT,CAPN9	-3193,28849
chr13:107186916-107187132	chr13	+	107186916	107187048	True	NM_004093,NR_034119	chr13,chr13	-,+	EFNB2,LOC728192	390,-158056
chr12:50296093-50296501	chr12	+	50296103	50296547	True	NM_000486,NM_012306,NR_026948	chr12,chr12,chr12	+,-,-	AQP2,FAIM2,LOC283332	47976,1263,9149
chr18:47722118-47722365	chr18	+	47722117	47722337	True	NM_001039535,NM_001080467	chr18,chr18	+,-	SKA1,MYO5B	179054,-666
chr11:117015549-117016104	chr11	+	117015621	117016146	True	NM_001184747,NM_001184746,NM_001184748,NM_025164,NM_002572	chr11,chr11,chr11,chr11,chr11	+,+,+,-,+	PAFAH1B2,PAFAH1B2,PAFAH1B2,SIK3,PAFAH1B2	-672,-672,-672,-46628,-672
chr14:77287646-77287927	chr14	+	77287822	77287882	True	NM_015305,NM_194287	chr14,chr14	-,+	ANGEL1,C14orf166B	-8539,4842
chr6:31978041-31978777	chr6_mcf_hap5	+	3358561	3358621	False	NR_001284,NM_001128590,NM_032454,NM_032470,NM_007293,NM_001002029,NM_000500,NM_004197	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	-,+,+,-,+,+,+,+	TNXA,CYP21A2,STK19,TNXB,C4A,C4B,CYP21A2,STK19	2073,-3061,2740,2323,3794,3794,-3061,2740
chr6:31978041-31978777	chr6_dbb_hap3	+	3264300	3264360	False	NR_001284,NM_001128590,NM_032454,NM_032470,NM_007293,NM_004197,NM_000500,NM_001002029	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	-,+,+,-,+,+,+,+	TNXA,CYP21A2,STK19,TNXB,C4A,STK19,CYP21A2,C4B	2073,-5409,2740,2323,3794,2740,-5409,3794
chr6:31978041-31978777	chr6	+	31978717	31978777	True	NR_001284,NM_001128590,NM_032454,NM_032470,NM_007293,NM_004197,NM_000500,NM_001002029	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,+,+,-,+,+,+,+	TNXA,CYP21A2,STK19,TNXB,C4A,STK19,CYP21A2,C4B	2073,-5409,2740,2323,3794,2740,-5409,3794
chr16:1582318-1583413	chr16	+	1582450	1583058	True	NM_001013658,NM_024600	chr16,chr16	-,+	PTX4,TMEM204	-43982,1172
chr8:37619217-37619417	chr8	+	37619350	37619453	True	NR_003671,NM_007198	chr8,chr8	-,+	LOC728024,PROSC	-13786,647
chr12:101189186-101189925	chr12	+	101189224	101189965	True	NM_145913,NM_178826	chr12,chr12	-,+	SLC5A8,ANO4	414104,-901
chr9:118690148-118691735	chr9	+	118690228	118691542	True	NM_002581,NR_024032	chr9,chr9	+,-	PAPPA,C9orf27	224528,-2851
chr4:186317947-186318242	chr4	+	186317958	186318182	True	NM_181726,NM_018409	chr4,chr4	+,-	ANKRD37,LRP2BP	-169,-17806
chr1:145294529-145296474	chr1	+	145294972	145296410	True	NM_032305,NM_001039703	chr1,chr1	-,+	POLR3GL,NBPF10	174027,-1658
chr13:108517798-108518342	chr13	+	108517832	108518318	True	NM_032859,NM_001080396	chr13,chr13	+,-	ABHD13,FAM155A	352444,1192
chr12:49462071-49462773	chr12	+	49462559	49462687	True	NM_144593,NM_005430	chr12,chr12	-,+	RHEBL1,WNT1	1146,-90374
chr2:178742222-178743069	chr2	+	178742445	178743085	True	NM_001077196,NM_152945	chr2,chr2	-,+	PDE11A,RBM45	10431,234096
chr1:228336080-228336387	chr1	+	228336085	228336415	True	NM_000858,NM_020435,NM_181465,NM_001159390,NM_001159391	chr1,chr1,chr1,chr1,chr1	+,+,-,+,+	GUK1,GJC2,MRPL55,GUK1,GUK1	-8207,1137,-39072,-8207,-3732
chr1:1631085-1631421	chr1	+	1631180	1631388	True	NM_001110781,NR_002946	chr1,chr1	-,+	SLC35E2B,MMP23A	-6937,-11
chr1:1631085-1631421	chr1	+	1567961	1568169	False	NM_001110781,NM_006983,NR_002946	chr1,chr1,chr1	-,+,+	SLC35E2B,MMP23B,MMP23A	56124,-452,-11
chr15:23258499-23259576	chr15	+	23259293	23259357	True	NR_024074,NR_003521	chr15,chr15	+,-	GOLGA8IP,WHAMML1	-4102,-50936
chr15:23258499-23259576	chr15	-	28953457	28953521	False	NR_033351,NR_026589	chr15,chr15	-,+	GOLGA8F,WHAMML2	-175314,29207
chr11:36419504-36419919	chr11	+	36419613	36419913	True	NM_001160169,NM_014186	chr11,chr11	+,-	PRR5L,COMMD9	2633,-108614
chr9:95569938-95570205	chr9	+	95569983	95570235	True	NM_015250,NR_026868	chr9,chr9	-,+	BICD2,ANKRD19	-42900,1657
chr5:178487681-178487975	chr5	+	178487698	178487900	True	NM_014594,NM_000843	chr5,chr5	+,-	ZNF354C,GRM6	-144,-65574
chr6:90114382-90116044	chr6	+	90114385	90115604	True	NM_021244,NM_014942	chr6,chr6	-,+	RRAGD,ANKRD6	6450,27292
chr17:18426474-18427571	chr17	+	18426772	18426980	True	NR_026809,NR_003554,NM_001040078	chr17,chr17,chr17	-,-,+	FAM106A,LOC220594,LGALS9C	3230,-2206,-46725
chrX:119292665-119293088	chrX	+	119292683	119293057	True	NM_139282,NM_032498,NM_001099685	chrX,chrX,chrX	-,+,+	RHOXF1,RHOXF2,RHOXF2B	-42836,-267,-267
chrX:119292665-119293088	chrX	-	119211116	119211490	False	NM_032498,NM_001099685	chrX,chrX	-,-	RHOXF2,RHOXF2B	267,267
chr12:12421549-12421918	chr12	+	12421835	12421921	True	NM_058169,NM_002336	chr12,chr12	+,-	LOH12CR1,LRP6	88098,-2024
chr2:64076780-64077062	chr2	+	64076793	64077074	True	NM_006759,NM_001001521,NM_001005739	chr2,chr2,chr2	+,+,-	UGP2,UGP2,VPS54	-7837,-8753,169197
chr15:25487149-25487721	chr15	+	25487168	25487735	True	NR_003344,NR_003358,NM_130838,NR_003349,NR_003353,NR_003352,NR_003351,NR_003350,NR_003357,NR_003356,NR_003355,NR_003354,NR_003302,NR_003303,NR_003359	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,-,+,+,+,+,+,+,+,+,+,+,+,+	SNORD115-29,SNORD115-43,UBE3A,SNORD115-34,SNORD115-38,SNORD115-37,SNORD115-36,SNORD115-35,SNORD115-42,SNORD115-41,SNORD115-40,SNORD115-39,SNORD115-10,SNORD115-11,SNORD115-44	-5987,-5987,162968,-9685,-2234,-4086,-5987,-7825,4756,2889,1025,-326,4756,-5987,8270
chr9:14315616-14315877	chr9	+	14315653	14315733	True	NM_005596,NR_003920,NM_001190737	chr9,chr9,chr9	-,+,-	NFIB,LOC389705,NFIB	-1608,677591,-1608
chr2:45894304-45895334	chr2	+	45894640	45895210	True	NM_018079,NM_005400	chr2,chr2	-,+	SRBD1,PRKCE	-56207,-15654
chrY:9639313-9640679	chrY	+	9639418	9640714	True	NR_001539,NR_003589	chrY,chrY	+,-	TTTY22,TTTY1B	-716,-27490
chrY:9639313-9640679	chrY	-	6230387	6230955	False	NR_001536,NR_003589	chrY,chrY	-,+	TTTY2,TTTY1B	65589,27486
chr22:37446847-37447556	chr22	+	37446962	37447491	True	NM_024681,NM_003312	chr22,chr22	+,-	KCTD17,TST	287,-31471
chr12:56416876-56417484	chr12	+	56416966	56417528	True	NM_006928,NM_022465	chr12,chr12	-,+	PMEL,IKZF4	-56470,-2328
chr4:154282912-154284657	chr4	+	154283009	154284244	True	NM_032117,NR_001562	chr4,chr4	+,-	MND1,ANXA2P1	-17264,-53046
chr19:17970453-17970684	chr19	+	17970543	17970729	True	NM_000980,NM_000215,NR_001593,NR_000012	chr19,chr19,chr19,chr19	+,-,+,+	RPL18A,JAK3,RPL18AP3,SNORA68	1,-11702,-3,2667
chr16:89577194-89578050	chr16	+	89577570	89577911	True	NM_199367,NM_003119,NM_013275	chr16,chr16,chr16	+,+,-	SPG7,SPG7,ANKRD11	-2823,-2823,-20601
chr16:67702218-67703104	chr16	+	67702410	67703124	True	NM_016948,NM_001082487,NM_001082486,NM_022914,NM_001012984,NM_032140,NM_001037281	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,-,+,-,+	PARD6A,ACD,ACD,ACD,C16orf86,C16orf48,PARD6A	-7610,-7692,-7692,-7692,-1744,-1782,-7610
chr10:85954817-85955051	chr10	+	85954830	85955052	True	NM_033100,NM_001171971,NM_001017924	chr10,chr10,chr10	+,+,-	CDHR1,CDHR1,LRIT2	-469,-469,30282
chr10:5524295-5525036	chr10	+	5524359	5524917	True	NM_017422,NM_005863	chr10,chr10	-,+	CALML5,NET1	16666,-35864
chr14:23822026-23822773	chr14	+	23822142	23822755	True	NM_020372,NM_016609,NM_172314	chr14,chr14,chr14	-,-,+	SLC22A17,SLC22A17,IL25	-663,-62,19262
chr7:91765350-91765660	chr7	+	91765361	91765535	True	NM_001146152,NM_000786,NM_019004	chr7,chr7,chr7	-,-,+	CYP51A1,CYP51A1,ANKIB1	-1302,-1521,110012
chr11:107047648-107047857	chr11	+	107047795	107047863	True	NM_001130037,NM_000855	chr11,chr11	+,-	ELMOD1,GUCY1A2	413953,-158624
chr7:6893970-6894608	chr7	+	6894143	6894635	True	NM_198097,NM_173565	chr7,chr7	-,+	C7orf28B,RSPH10B	-28217,-100454
chr7:6893970-6894608	chr11	+	67478261	67478685	False	NM_007103,NM_001031615	chr11,chr11	+,-	NDUFV1,ALDH3B2	-104363,-29576
chr7:6893970-6894608	chr11	-	71319126	71319280	False	NM_001012710,NM_001005405	chr11,chr11	+,-	KRTAP5-10,KRTAP5-11	-42672,-25205
chr2:45167547-45167797	chr2	+	45167546	45167804	True	NM_005413,NM_016932	chr2,chr2	+,-	SIX3,SIX2	1232,68788
chr6:57063234-57063920	chr6	+	57063523	57063896	True	NM_183227,NM_004282	chr6,chr6	-,+	RAB23,BAG2	22412,-26477
chr1:101492022-101492953	chr1	+	101492067	101492993	True	NM_001077395,NM_001077394,NM_133496,NM_015958	chr1,chr1,chr1,chr1	-,-,+,-	DPH5,DPH5,SLC30A7,DPH5	-705,-705,-130490,-705
chr18:12656056-12657134	chr18	+	12656709	12657069	True	NM_020148,NM_001128626,NM_001128627,NM_147163	chr18,chr18,chr18,chr18	-,-,-,+	SPIRE1,SPIRE1,SPIRE1,PSMG2	893,893,22,1668
chr17:39038246-39038622	chr17	+	39038293	39038627	True	NM_019010,NM_001195386	chr17,chr17	-,+	KRT20,TMEM99	2920,-62909
chr13:29599894-29600966	chr13	+	29600154	29600992	True	NM_181785,NM_001033602	chr13,chr13	-,+	SLC46A3,MTUS2	-307004,-1457
chr19:33072745-33073436	chr19	+	33072748	33073348	True	NM_004708,NM_032139	chr19,chr19	+,-	PDCD5,ANKRD27	-705,92804
chr19:39734653-39735510	chr19	+	39735094	39735410	True	NM_172139,NM_172138	chr19,chr19	-,+	IL28B,IL28A	251,23746
chr19:39734653-39735510	chr19	+	39727971	39728021	False	NM_172139,NM_172138	chr19,chr19	-,+	IL28B,IL28A	7640,31135
chr12:100403515-100404713	chr12	+	100403522	100404272	True	NM_152788,NR_031728	chr12,chr12	-,+	ANKS1B,MIR1827	-25090,179389
chr4:46910983-46912698	chr4	+	46911105	46912553	True	NM_130902,NM_000812	chr4,chr4	-,+	COX7B2,GABRB1	-47,120741
chr7:35737646-35739328	chr7	+	35737896	35739130	True	NM_022373,NM_001011553	chr7,chr7	-,+	HERPUD2,SEPT7	-3124,101496
chr3:88036110-88037233	chr3	+	88036484	88037218	True	NM_001008390,NM_000866	chr3,chr3	-,+	CGGBP1,HTR1F	70978,-4818
chr21:46031226-46032332	chr21	+	46031537	46032067	True	NM_198695,NM_198688	chr21,chr21	+,-	KRTAP10-8,KRTAP10-6	46,-19151
chr1:212606713-212607569	chr1	+	212606727	212607595	True	NR_026598,NM_013349,NM_018252	chr1,chr1,chr1	+,+,-	NENF,NENF,TMEM206	-549,-549,-18460
chr1:20913625-20915574	chr1	+	20913721	20915296	True	NM_001785,NM_005216	chr1,chr1	+,-	CDA,DDOST	147,72791
chr10:103546336-103546615	chr10	+	103546407	103546483	True	NR_036114,NM_006993	chr10,chr10	+,-	MIR3158-1,NPM3	-185292,-3237
chr20:61567324-61567625	chr20	+	61567378	61567452	True	NM_001193370,NM_033081,NM_017896,NM_001193369,NM_022105,NM_080797,NM_080796	chr20,chr20,chr20,chr20,chr20,chr20,chr20	-,-,+,-,-,-,-	DIDO1,DIDO1,C20orf11,DIDO1,DIDO1,DIDO1,DIDO1	-9475,1902,1988,-9475,1902,1902,-9475
chr15:74042046-74042781	chr15	+	74042091	74042610	True	NM_025240,NM_001039614	chr15,chr15	+,-	CD276,C15orf59	-65520,1257
chr19:21319478-21320907	chr19	+	21320007	21320590	True	NM_133473,NM_021269	chr19,chr19	+,-	ZNF431,ZNF708	4249,191673
chr16:2041172-2041492	chr16	+	2041189	2041389	True	NM_144603,NM_004209,NM_005262	chr16,chr16,chr16	-,+,+	NOXO1,SYNGR3,GFER	-9749,-1294,-7090
chr1:16844229-16845293	chr1	+	16844541	16844994	True	NR_023386,NR_037446	chr1,chr1	-,+	CROCCP3,MIR3675	-25345,30414
chr16:85625453-85626049	chr16	+	85625452	85626093	True	NM_001134473,NM_016095	chr16,chr16	+,-	KIAA0182,GINS2	18935,96545
chr3:183354784-183355605	chr3	+	183354797	183355392	True	NM_130446,NM_017644	chr3,chr3	-,+	KLHL6,KLHL24	-81298,-1437
chr9:139870229-139870463	chr9	+	139870233	139870397	True	NM_000954,NM_004669,NM_207510	chr9,chr9,chr9	+,-,+	PTGDS,CLIC3,LCNL1	1558,20677,7047
chr1:62191762-62192390	chr1	+	62191764	62192250	True	NM_176877,NM_032027	chr1,chr1	+,-	INADL,TM2D1	15898,-669
chr6:14702163-14702582	chr6	+	14702163	14702609	True	NM_001031713,NM_004973	chr6,chr6	-,+	CCDC90A,JARID2	-887374,543917
chr17:38441275-38441883	chr17	+	38441480	38441828	True	NM_001254,NM_152219	chr17,chr17	+,-	CDC6,GJD3	2317,79167
chr19:54369434-54369650	chr19	+	54369441	54369695	True	NM_138373,NM_144687,NM_001020821,NM_001020820,NM_001020818,NM_001020819	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+	MYADM,NLRP12,MYADM,MYADM,MYADM,MYADM	1441,-41793,2964,47,3085,1441
chr17:53633025-53633245	chr17	+	53633050	53633196	True	NM_021213,NM_012329	chr17,chr17	+,-	PCTP,MMD	195143,-133709
chr17:35851457-35852554	chr17	+	35851646	35852577	True	NM_198839,NM_007026	chr17,chr17	-,+	ACACA,DUSP14	-84744,-1749
chr6:11116221-11117314	chr6	+	11116570	11117054	True	NM_001135575,NM_207582	chr6,chr6	+,-	LOC221710,ERVFRDE1	-22366,-4499
chr12:32908769-32909711	chr12	+	32908897	32909707	True	NM_001040436,NM_012063	chr12,chr12	-,+	YARS2,DNM1L	-10,-76811
chr1:104658135-104658708	chr1	+	104658391	104658751	True	NM_001008221,NR_033990	chr1,chr1	-,+	AMY1A,LOC100129138	-419318,-42804
chr11:119015652-119017455	chr11	+	119016085	119017376	True	NM_022169,NM_001142505,NM_001382	chr11,chr11,chr11	+,+,-	ABCG4,ABCG4,DPAGT1	2373,2922,-43300
chr16:21966227-21966741	chr16	+	21966418	21966697	True	NM_173806,NM_003366	chr16,chr16	-,+	PDZD9,UQCRC2	45784,-1865
chr19:58282831-58284299	chr19	+	58282905	58284321	True	NM_017652,NM_001077426,NM_024762,NM_001204814	chr19,chr19,chr19,chr19	+,+,-,+	ZNF586,ZNF586,ZNF552,ZNF586	-1936,-1936,42010,-1936
chr1:247496510-247497041	chr1	+	247496568	247497076	True	NM_032752,NM_173858	chr1,chr1	-,+	ZNF496,VN1R5	-1523,-77245
chr19:12781083-12781422	chr19	+	12781292	12781432	True	NM_001099737,NM_001173498,NM_032332,NM_000528,NM_016145,NR_029375	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,-,-,+	WDR83,MAN2B1,WDR83,MAN2B1,C19orf56,WDR83	-3725,-3701,-826,-3701,-827,-3725
chr11:124499157-124500797	chr11	+	124499328	124500774	True	NM_032811,NR_016021,NM_170601	chr11,chr11,chr11	+,+,-	TBRG1,TBRG1,SIAE	-6643,-6643,43055
chr19:48214706-48216588	chr19	+	48214983	48216473	True	NM_014601,NM_198479	chr19,chr19	+,-	EHD2,TPRX1	127,90438
chr12:104609510-104609725	chr12	+	104609620	104609694	True	NM_006166,NM_001093771	chr12,chr12	-,+	NFYB,TXNRD1	-77580,-112
chr16:85931562-85932205	chr16	+	85931561	85932162	True	NM_002163,NM_006067	chr16,chr16	+,-	IRF8,COX4NB	611,-98413
chr1:209760732-209761338	chr1	+	209760887	209761380	True	NM_020439,NR_036213	chr1,chr1	+,-	CAMK1G,MIR4260	-3893,35526
chr1:223899683-223899925	chr1	+	223899823	223899925	True	NM_001143962,NM_001748	chr1,chr1	-,+	CAPN8,CAPN2	-46387,193
chr14:21539087-21539301	chr14	+	21539093	21539285	True	NM_016423,NM_018071	chr14,chr14	-,+	ZNF219,ARHGEF40	27573,-617
chr1:20464703-20466344	chr1	+	20464791	20466199	True	NM_022819,NM_012400	chr1,chr1	+,-	PLA2G2F,PLA2G2D	230,-18783
chr9:123765290-123766237	chr9	+	123765634	123766034	True	NM_007018,NM_001735	chr9,chr9	+,-	CEP110,C5	84539,46576
chr6:15081574-15082408	chr6	+	15081740	15082079	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	164447,581261
chr6:26686093-26686353	chr6	+	26686112	26686170	True	NM_013375,NM_024639	chr6,chr6	+,-	ABT1,ZNF322A	-88983,-26149
chr6:26686093-26686353	chr6	-	58184060	58184118	False	NM_000947,NR_003660	chr6,chr6	+,-	PRIM2,GUSBP4	-1001689,103656
chr8:72754696-72754951	chr8	+	72754848	72754994	True	NM_005098,NR_033651,NR_033652	chr8,chr8,chr8	-,+,+	MSC,LOC100132891,LOC100132891	1787,1356,363
chr13:35513537-35513996	chr13	+	35513537	35514039	True	NM_005584,NM_015678	chr13,chr13	-,+	MAB21L1,NBEA	536845,2384
chr14:103390704-103391784	chr14	+	103390844	103391747	True	NM_006035,NM_030943	chr14,chr14	-,+	CDC42BPB,AMN	132045,-1902
chr1:150946587-150946800	chr1	+	150946676	150946840	True	NM_003568,NM_022075,NM_181746	chr1,chr1,chr1	+,-,-	ANXA9,LASS2,LASS2	7658,650,650
chr3:160237557-160239102	chr3	+	160237820	160239092	True	NR_029525,NR_003001	chr3,chr3	+,-	MIR16-2,SCARNA7	-115345,-4796
chr16:4614374-4615648	chr16	+	4614451	4615448	True	NM_001145011,NM_013399	chr16,chr16	+,-	LOC342346,C16orf5	-8022,-25635
chr20:32953379-32955074	chr20	+	32953593	32954861	True	NM_031483,NM_001161766	chr20,chr20	+,-	ITCH,AHCY	-2588,-53985
chr7:79766929-79768410	chr7	+	79767127	79768447	True	NM_001102386,NM_002069	chr7,chr7	-,+	GNAT3,GNAI1	372848,-3038
chr8:74660425-74661116	chr8	+	74660424	74660738	True	NM_001164381,NM_001164380,NM_001164383,NM_001164382,NM_001164385,NM_001164384,NM_001040613,NM_014393	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,-,-,+,-	STAU2,STAU2,STAU2,STAU2,STAU2,STAU2,TMEM70,STAU2	-1262,-1262,-1262,-1262,-1262,-481,227638,-1262
chr5:127435677-127436967	chr5	+	127435793	127436918	True	NR_015360,NM_001046	chr5,chr5	-,+	FLJ33630,SLC12A2	-17027,-16361
chr5:156694705-156695236	chr5	+	156694838	156695256	True	NM_001037333,NM_001037332,NM_001001343,NM_014376	chr5,chr5,chr5,chr5	+,+,-,+	CYFIP2,CYFIP2,FNDC9,CYFIP2	-1798,-1702,77523,1105
chr17:42992922-42993726	chr17	+	42993132	42993713	True	NM_001131019,NM_213607,NM_002055	chr17,chr17,chr17	-,+,-	GFAP,CCDC103,GFAP	-218,-16029,-218
chr5:34006883-34007656	chr5	+	34006908	34007696	True	NM_001167598,NM_001167595,NM_001167597,NM_001167596,NM_014324,NM_016568,NM_203382	chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,-,+,-	AMACR,AMACR,AMACR,AMACR,AMACR,RXFP3,AMACR	574,574,574,574,574,-70476,574
chr11:111895738-111896152	chr11	+	111895790	111896119	True	NM_001931,NM_001082619	chr11,chr11	+,-	DLAT,PIH1D2	-303,48826
chr9:34379444-34379700	chr9	+	34379523	34379733	True	NM_147168,NM_147169,NM_020702,NM_147173	chr9,chr9,chr9,chr9	-,-,-,+	C9orf24,C9orf24,KIAA1161,NUDT2	1915,1915,-2629,-50070
chr12:53604153-53605256	chr12	+	53604236	53605116	True	NM_001004304,NM_000889,NM_001042728	chr12,chr12,chr12	+,-,-	ZNF740,ITGB7,RARG	-29754,-3236,9084
chr1:179052032-179052686	chr1	+	179052066	179052526	True	NM_022371,NM_001136000	chr1,chr1	+,-	TOR3A,ABL2	-1005,59756
chr12:50795321-50795535	chr12	+	50795339	50795501	True	NR_033200,NM_052879,NM_001145475,NM_199190,NM_001170804,NM_001170803,NM_199188,NM_001170808	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,-,+,+,+,+,+	LARP4,LARP4,FAM186A,LARP4,LARP4,LARP4,LARP4,LARP4	-798,-798,-4934,-798,-798,-798,-798,-798
chr1:2939461-2939799	chr1	+	2939506	2939722	True	NM_080431,NR_015440	chr1,chr1	+,-	ACTRT2,FLJ42875	-1511,44617
chr1:111065572-111066396	chr1	+	111065617	111066233	True	NM_005549,NR_003599	chr1,chr1	-,+	KCNA10,CYMP	-3820,-42281
chr6:10581796-10582917	chr6	+	10581852	10582954	True	NM_001145020,NM_145655	chr6,chr6	-,+	C6orf52,GCNT2	111936,3038
chr1:153927897-153928404	chr1	+	153928223	153928381	True	NM_130898,NM_181715,NM_014856	chr1,chr1,chr1	+,-,-	CREB3L4,CRTC2,DENND4B	12015,2801,-9069
chr10:103534582-103534910	chr10	+	103534598	103534683	True	NM_006993,NM_033164,NM_033165,NM_033163,NR_036114,NM_006119	chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,+,-	NPM3,FGF8,FGF8,FGF8,MIR3158-1,FGF8	8544,1133,1133,1133,-173475,1133
chr22:25404019-25405639	chr22	+	25404297	25405137	True	NM_001001663,NM_001145206	chr22,chr22	-,+	TMEM211,KIAA1671	-68983,18803
chr20:46042798-46043095	chr20	+	46042798	46042900	True	NM_183048,NM_001174087	chr20,chr20	-,+	ZMYND8,NCOA3	-57324,87700
chr17:30481768-30483129	chr17	+	30481924	30483164	True	NM_018307,NR_002222	chr17,chr17	+,-	RHOT1,ARGFXP2	-12502,-3334
chr17:41160965-41161491	chr17	+	41160964	41161136	True	NM_006373,NM_005533	chr17,chr17	-,+	VAT1,IFI35	13373,-2275
chr4:76948124-76949681	chr4	+	76948542	76949702	True	NM_005409,NM_001565,NM_001130017	chr4,chr4,chr4	-,-,+	CXCL11,CXCL10,ART3	7705,-3853,-16257
chr19:44303486-44303839	chr19	+	44303720	44303888	True	NM_001031749,NM_181845	chr19,chr19	-,+	LYPD5,ZNF283	2775,27584
chr5:67533621-67535512	chr5	+	67533756	67535501	True	NM_005582,NM_181523	chr5,chr5	-,+	CD180,PIK3R1	-1041139,-11345
chr1:156472851-156474015	chr1	+	156472874	156473725	True	NM_001105669,NM_005920	chr1,chr1	+,-	TTC24,MEF2D	75793,-2345
chr17:41560685-41560958	chr17	+	41560690	41560996	True	NM_001986,NM_004941	chr17,chr17	-,+	ETV4,DHX8	62359,337
chr20:43165904-43166376	chr20	+	43166161	43166227	True	NM_007066,NM_006811,NM_181805,NM_181804	chr20,chr20,chr20,chr20	+,-,+,+	PKIG,SERINC3,PKIG,PKIG	-5784,-15435,-5784,-5784
chr7:23223051-23224431	chr7	+	23223135	23224086	True	NM_032581,NM_007342	chr7,chr7	-,+	FAM126A,NUPL2	-169365,-1741
chr1:11905435-11906185	chr1	+	11905484	11906172	True	NR_037806,NM_006172	chr1,chr1	+,-	NPPA-AS1,NPPA	-5165,1718
chr11:58710264-58710903	chr11	+	58710301	58710842	True	NM_145016,NM_080661	chr11,chr11	-,+	GLYATL2,GLYATL1	-98304,45
chr11:18530030-18531822	chr11	+	18530030	18531707	True	NM_144972,NM_006292	chr11,chr11	+,-	LDHAL6A,TSG101	-52713,16841
chr17:3380371-3380837	chr17	+	3380472	3380733	True	NM_001170696,NM_001170697,NM_001170695,NM_001170698,NM_001170699,NM_000049,NM_032598,NM_001128085	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,+,-,+	SPATA22,SPATA22,SPATA22,SPATA22,SPATA22,ASPA,SPATA22,ASPA	-5330,-5346,-5330,-5373,-5405,-1228,-5431,-3120
chr14:65066568-65068464	chr14	+	65066637	65068232	True	NM_006977,NM_172365	chr14,chr14	-,+	ZBTB25,C14orf50	-96083,-50069
chr15:66544963-66545316	chr15	+	66544989	66545348	True	NM_133375,NM_032445	chr15,chr15	+,-	DIS3L,MEGF11	40284,777
chr7:100028567-100028972	chr7	+	100028581	100028931	True	NM_001194992,NM_001194991,NM_001194990,NM_019606,NM_017984,NM_145030	chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,-,-	MEPCE,MEPCE,MEPCE,MEPCE,ZCWPW1,C7orf47	-2219,-2219,-2219,-1378,-2279,5214
chr1:156402655-156404038	chr1	+	156402737	156404071	True	NM_006365,NR_026549	chr1,chr1	-,+	C1orf61,RHBG	-3553,-63785
chr17:28444054-28445972	chr17	+	28444276	28445755	True	NR_036149,NM_032141,NR_029945	chr17,chr17,chr17	-,+,+	MIR3184,CCDC55,MIR423	-98,-493,-230
chr9:34328807-34329058	chr9	+	34328811	34329071	True	NM_194313,NM_147172,NM_147173,NM_001161	chr9,chr9,chr9,chr9	-,+,+,+	KIF24,NUDT2,NUDT2,NUDT2	177,432,432,432
chrX:35817292-35818085	chrX	+	35817451	35818107	True	NM_001099921,NM_031442	chrX,chrX	+,-	MAGEB16,TMEM47	-1044,-1142046
chr16:1345759-1346057	chr16	+	1345818	1345878	True	NM_194261,NM_001001410	chr16,chr16	+,-	UBE2I,C16orf42	13301,56045
chr20:35091353-35092972	chr20	+	35091553	35092692	True	NM_183006,NM_032214,NM_001042486	chr20,chr20,chr20	+,-,+	DLGAP4,SLA2,DLGAP4	-1462,181929,-1762
chr2:73871847-73872205	chr2	+	73871943	73872239	True	NM_003960,NR_003683	chr2,chr2	-,+	NAT8,ALMS1P	-2406,52
chr11:61346254-61346770	chr11	+	61346428	61346814	True	NM_004200,NR_002775	chr11,chr11	-,+	SYT7,RPLP0P2	1534,35693
chr2:71160027-71160239	chr2	+	71160227	71160287	True	NM_144582,NM_001692	chr2,chr2	-,+	TEX261,ATP6V1B1	61764,2710
chr12:122651076-122651386	chr12	+	122651095	122651369	True	NM_152759,NM_001014336	chr12,chr12	+,-	LRRC43,IL31	896,7427
chr5:126338590-126338891	chr5	+	126338589	126338883	True	NM_001198557,NM_178450	chr5,chr5	+,-	LMNB1,MARCH3	-225795,27608
chr16:30773917-30774858	chr16	+	30773930	30774722	True	NM_001195620,NM_014771,NM_001014979	chr16,chr16,chr16	-,+,-	C16orf93,RNF40,C16orf93	-365,-351,-365
chr19:10151899-10152169	chr19	+	10151997	10152157	True	NM_015719,NR_027300	chr19,chr19	-,+	COL5A3,C3P1	-30850,-17
chr2:27442548-27443680	chr2	+	27442769	27443177	True	NM_021095,NM_001170795,NM_004341,NR_028323,NM_016085,NM_080592	chr2,chr2,chr2,chr2,chr2,chr2	-,+,+,-,+,+	SLC5A6,C2orf28,CAD,SLC5A6,C2orf28,C2orf28	-7594,-7607,-2568,-7594,-7607,-7927
chr19:15751078-15751306	chr19	+	15751090	15751324	True	NM_000896,NM_001199208,NM_001199209,NR_033864	chr19,chr19,chr19,chr19	+,+,+,-	CYP4F3,CYP4F3,CYP4F3,CYP4F24P	382,382,382,139524
chr3:12201397-12202056	chr3	+	12201629	12202093	True	NM_003256,NM_005037	chr3,chr3	-,+	TIMP4,PPARG	-778,127255
chr20:43976057-43976686	chr20	+	43976114	43976720	True	NM_002999,NM_001197129	chr20,chr20	-,+	SDC4,SYS1	394,13856
chr9:132817729-132818145	chr9	+	132817822	132817956	True	NM_001136557,NM_015033,NM_020960,NM_001136558	chr9,chr9,chr9,chr9	+,-,+,+	GPR107,FNBP1,GPR107,GPR107	-1891,-12349,-1891,-1891
chr19:40004253-40005026	chr19	+	40004305	40005029	True	NM_152361,NM_182704	chr19,chr19	-,+	EID2B,SELV	18515,723
chr15:80443997-80444671	chr15	+	80444036	80444662	True	NM_000137,NM_004049	chr15,chr15	+,-	FAH,BCL2A1	678,-180393
chr10:12172077-12173094	chr10	+	12172111	12172895	True	NM_018144,NR_024576,NR_024577,NM_014142,NM_001142628,NM_001142627	chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,-,+,+	SEC61A2,SEC61A2,SEC61A2,NUDT5,SEC61A2,SEC61A2	-528,-528,-528,65298,-528,-528
chr5:43103642-43104850	chr5	+	43104229	43104841	True	NM_003432,NR_034127	chr5,chr5	+,-	ZNF131,LOC100132356	16800,-37156
chr19:38082536-38084458	chr19	+	38083160	38083861	True	NM_001172225,NM_001172226,NM_016536	chr19,chr19,chr19	+,+,-	ZNF540,ZNF540,ZNF571	1869,1869,1869
chr2:109746830-109747421	chr2	+	109746836	109747377	True	NR_029193,NM_001099289	chr2,chr2	-,+	LOC100287216,SH3RF3	-261,-890
chr1:2485198-2485572	chr1	+	2485253	2485457	True	NR_037844,NR_026927,NM_003820	chr1,chr1,chr1	-,-,+	LOC100133445,LOC115110,TNFRSF14	3043,-969,2347
chr1:2485198-2485572	chr1	-	2499153	2499203	False	NR_037844,NM_003820	chr1,chr1	-,+	LOC100133445,TNFRSF14	-10703,-11399
chr1:203056933-203058605	chr1	+	203057367	203058598	True	NM_015053,NM_000674,NM_002479	chr1,chr1,chr1	+,+,-	PPFIA4,ADORA1,MYOG	-37107,38237,-1990
chr19:51018773-51020044	chr19	+	51018875	51019958	True	NM_138334,NM_001024656,NM_001114598,NM_206538	chr19,chr19,chr19,chr19	-,-,-,+	JOSD2,ASPDH,ASPDH,C19orf63	-4530,-928,-1733,-39190
chr2:97306223-97307044	chr2	+	97306446	97306898	True	NM_017991,NM_001113382,NM_001115016	chr2,chr2,chr2	-,+,-	KIAA1310,FER1L5,KIAA1310	-2331,1675,-2331
chr9:46692169-46693261	chr9	+	46692297	46693293	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-3061567,-4786
chr9:46692169-46693261	chr9	-	46839384	46839449	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-3208654,-151884
chr9:46692169-46693261	chr9	-	44397483	44397548	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	592687,-766753
chr9:46692169-46693261	chr9	-	42013748	42014744	False	NR_003670,NM_001012421	chr9,chr9	-,+	KGFLP2,ANKRD20A2	4894,353558
chr1:197871076-197871696	chr1	+	197871076	197871592	True	NM_001195216,NM_001024594	chr1,chr1	-,+	DENND1B,C1orf53	-126453,89
chr15:77167013-77168032	chr15	+	77167361	77167629	True	NM_002902,NM_020843	chr15,chr15	+,-	RCN2,SCAPER	56332,8646
chr9:140007824-140008299	chr9	+	140007829	140008227	True	NM_013379,NM_000832	chr9,chr9	-,+	DPP7,GRIN1	1018,25381
chr14:39747218-39748190	chr14	+	39747591	39748088	True	NM_203355,NM_177452	chr14,chr14	+,-	CTAGE5,TRAPPC6B	-11327,-107957
chr7:103830672-103831996	chr7	+	103831113	103832030	True	NM_002553,NM_199000	chr7,chr7	-,+	ORC5,LHFPL3	16522,137073
chr12:16753725-16755477	chr12	+	16753757	16755508	True	NM_018640,NM_001001395,NM_145764	chr12,chr12,chr12	-,-,+	LMO3,LMO3,MGST1	3973,5566,-247457
chr10:133748239-133748626	chr10	+	133748324	133748650	True	NM_018461,NM_004052,NR_033191	chr10,chr10,chr10	+,-,+	PPP2R2D,BNIP3,PPP2R2D	-418,46835,-418
chr1:4037681-4038376	chr1	+	4037711	4038417	True	NR_024455,NM_207356	chr1,chr1	+,-	LOC100133612,C1orf174	-220794,-220854
chr1:27652077-27653969	chr1	+	27652280	27653853	True	NR_037576,NM_004672,NR_037577,NM_032125,NR_037580,NR_033926	chr1,chr1,chr1,chr1,chr1,chr1	+,-,+,+,+,+	TMEM222,MAP3K6,TMEM222,TMEM222,TMEM222,LOC644961	-3695,39534,-3695,-3695,-3695,-1966
chr10:12233957-12234572	chr10	+	12234052	12234454	True	NM_014142,NM_006023	chr10,chr10	-,+	NUDT5,CDC123	3747,3506
chr2:238472073-238472336	chr2	+	238472104	238472294	True	NM_015893,NM_022449	chr2,chr2	+,-	PRLH,RAB17	2922,27525
chr2:203500681-203501713	chr2	+	203500762	203501559	True	NM_178231,NM_173511	chr2,chr2	-,+	ICA1L,FAM117B	234692,-912
chr4:5896491-5897311	chr4	+	5896571	5897343	True	NM_001313,NM_153717,NM_001014809	chr4,chr4,chr4	-,+,-	CRMP1,EVC,CRMP1	-6256,-183698,-1786
chr5:79598582-79598912	chr5	+	79598594	79598678	True	NM_032567,NR_004845	chr5,chr5	+,-	SPZ1,LOC644936	17111,-2297
chr12:42876814-42877093	chr12	+	42876947	42877029	True	NM_016488,NM_001144881,NM_001144882,NM_001144883	chr12,chr12,chr12,chr12	+,-,-,-	PPHLN1,PRICKLE1,PRICKLE1,PRICKLE1	-157051,437,818,818
chr8:107783454-107784571	chr8	+	107783609	107784326	True	NM_001198535,NM_139166	chr8,chr8	+,-	OXR1,ABRA	-45332,-1137
chrX:140095965-140097152	chrX	+	140096801	140096971	True	NM_032461,NR_031725,NM_145664,NM_139019	chrX,chrX,chrX,chrX	+,-,+,+	SPANXB1,MIR320D2,SPANXB2,SPANXF1	-99,-88417,-99,-99
chrX:140095965-140097152	chrX	+	140084796	140084966	False	NM_032461,NR_031725,NM_145664,NM_139019	chrX,chrX,chrX,chrX	+,-,+,+	SPANXB1,MIR320D2,SPANXB2,SPANXF1	-99,-76412,-99,-99
chr12:122458952-122459384	chr12	+	122459006	122459432	True	NM_001171993,NM_020993,NM_001024808	chr12,chr12,chr12	-,+,+	HPD,BCL7A,BCL7A	-132489,428,428
chr6:44089570-44089910	chr6	+	44089684	44089816	True	NM_018426,NM_032111	chr6,chr6	+,-	TMEM63B,MRPL14	5559,5425
chrX:142110777-142112573	chrX	+	142110786	142112618	True	NM_001009613,NM_001009609	chrX,chrX	+,-	SPANXN4,SPANXN3	1085,492740
chr22:29837010-29838066	chr22	+	29837030	29838082	True	NR_002727,NM_021026	chr22,chr22	-,+	RFPL1S,RFPL1	86,-2509
chr1:44115687-44116195	chr1	+	44115777	44116063	True	NR_033827,NM_014663	chr1,chr1	-,+	LOC100132774,KDM4A	56999,-31
chr10:24535071-24536652	chr10	+	24535280	24536450	True	NM_020824,NR_023388	chr10,chr10	-,+	ARHGAP21,PRINS	476197,8
chr12:58132727-58133592	chr12	+	58132914	58133608	True	NM_001122772,NM_005981,NM_014770	chr12,chr12,chr12	-,+,-	AGAP2,TSPAN31,AGAP2	-885,5175,2382
chr19:44535794-44537050	chr19	+	44536068	44537078	True	NM_001129996,NM_013360,NR_033341	chr19,chr19,chr19	+,+,-	ZNF222,ZNF222,LOC100379224	-6632,-6632,80308
chr7:102257516-102259131	chr7	+	102258153	102258674	True	NM_001079877,NM_001031618,NM_006989	chr7,chr7,chr7	-,+,-	RASA4,SPDYE2,RASA4	-948,32097,-948
chr7:102257516-102259131	chr7	+	102159178	102159699	False	NM_001031618,NM_006234	chr7,chr7	+,-	SPDYE2,POLR2J	31979,-39797
chr22:31519041-31519284	chr22	+	31519267	31519333	True	NM_080430,NM_001002837	chr22,chr22	-,+	SELM,INPP5J	-15716,-357
chr18:28677133-28678463	chr18	+	28677331	28678396	True	NM_001942,NM_004949,NM_024422	chr18,chr18,chr18	+,-,-	DSG1,DSC2,DSC2	219655,4058,4058
chr1:26702123-26702346	chr1	+	26702285	26702362	True	NM_001114759,NM_024674,NM_173574	chr1,chr1,chr1	-,+,-	ZNF683,LIN28A,ZNF683	-3019,34906,-3019
chr7:136560310-136561923	chr7	+	136560324	136561959	True	NM_001006632,NM_001006630,NM_001006627,NM_001006631,NM_001006629,NM_001006628,NM_001006626,NM_000739,NM_002825	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,+,+,+,+,-	CHRM2,CHRM2,CHRM2,CHRM2,CHRM2,CHRM2,CHRM2,CHRM2,PTN	-6543,-6976,-6976,-6543,-6391,-6382,-6506,-6543,466637
chrX:16885960-16887787	chrX	+	16886554	16887639	True	NM_001198719,NM_002893,NM_001080975	chrX,chrX,chrX	-,-,+	RBBP7,RBBP7,REPS2	389,945,77174
chr14:77307085-77308503	chr14	+	77307673	77308534	True	NM_015305,NM_194287	chr14,chr14	-,+	ANGEL1,C14orf166B	-28390,-14999
chr19:9876843-9877498	chr19	+	9877103	9877255	True	NM_001048241,NM_001077624	chr19,chr19	+,-	UBL5,ZNF846	61312,2205
chr2:18766292-18766832	chr2	+	18766317	18766871	True	NM_033253,NM_002252,NM_001199088,NM_001002006,NM_001199086,NM_001199087,NM_001199104,NM_001199103	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	-,+,-,-,-,-,-,-	NT5C1B,KCNS3,NT5C1B,NT5C1B,NT5C1B,NT5C1B,NT5C1B-RDH14,NT5C1B-RDH14	4025,-706423,4025,4025,4025,4025,4025,4025
chr5:131132767-131133003	chr5	+	131132840	131132970	True	NM_000588,NM_001008738,NM_133372	chr5,chr5,chr5	+,-,-	IL3,FNIP1,FNIP1	263376,-84,-84
chr14:23755296-23755584	chr14	+	23755352	23755626	True	NM_004050,NM_020834	chr14,chr14	+,-	BCL2L2,HOMEZ	20344,-43
chr21:31765313-31766445	chr21	+	31765383	31766480	True	NR_036221,NM_181599	chr21,chr21	-,+	MIR4327,KRTAP13-1	-17687,1911
chrX:47341594-47341896	chrX	+	47341605	47341895	True	NM_001654,NM_153380,NM_007130	chrX,chrX,chrX	+,-,-	ARAF,ZNF41,ZNF41	78620,500,500
chr1:3529160-3529534	chr1	+	3529161	3529424	True	NM_001409,NM_182752	chr1,chr1	-,+	MEGF6,TPRG1L	-1102,12131
chr9:5462053-5463473	chr9	+	5462701	5463481	True	NM_014143,NM_018465	chr9,chr9	+,-	CD274,C9orf46	-12249,-24841
chr15:74168143-74168727	chr15	+	74168143	74168521	True	NM_004809,NM_153356	chr15,chr15	-,+	STOML1,TBC1D21	116164,-2228
chr17:37793849-37794333	chr17	+	37793892	37794317	True	NM_001165937,NM_181505,NM_001165938,NM_006160,NM_006804	chr17,chr17,chr17,chr17,chr17	+,+,+,-,+	STARD3,PPP1R1B,STARD3,NEUROD2,STARD3	-610,-9190,-610,-29717,-610
chr12:12935921-12936540	chr12	+	12936166	12936236	True	NM_030817,NM_006143	chr12,chr12	+,-	APOLD1,GPR19	2304,-87045
chr16:12994642-12994851	chr16	+	12994652	12994802	True	NM_001145205,NM_001145204,NM_018340	chr16,chr16,chr16	+,+,-	SHISA9,SHISA9,CPPED1	674,674,-96908
chr20:34338544-34339046	chr20	+	34338618	34338986	True	NM_184234,NM_004902,NM_016436	chr20,chr20,chr20	-,-,+	RBM39,RBM39,PHF20	-8425,-8425,20936
chr16:66949395-66949653	chr16	+	66949394	66949512	True	NM_003869,NM_001204746,NM_001204744,NM_001204745,NM_001128850,NM_004165,NM_004062	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,-,-,-,-	CES2,CDH16,CDH16,CDH16,RRAD,RRAD,CDH16	18834,3425,3425,3425,9977,9977,3425
chr3:127539652-127540240	chr3	+	127539674	127540262	True	NM_207335,NM_001003794,NM_007283	chr3,chr3,chr3	+,-,-	KBTBD12,MGLL,MGLL	101639,1845,1495
chr1:229476863-229477223	chr1	+	229476996	229477250	True	NM_145257,NM_006542	chr1,chr1	-,+	C1orf96,SPHAR	1488,-36931
chr9:127117128-127117887	chr9	+	127117168	127117830	True	NM_002799,NR_027406	chr9,chr9	-,+	PSMB7,LOC100129034	59941,-1467
chr11:118965651-118965964	chr11	+	118965772	118966002	True	NM_002105,NM_001024382,NM_001382	chr11,chr11,chr11	-,+,-	H2AFX,HMBS,DPAGT1	225,-7126,6833
chr3:1147224-1147448	chr3	+	1147224	1147490	True	NM_000564,NM_014461	chr3,chr3	-,+	IL5RA,CNTN6	2004618,-12652
chr11:94502822-94503305	chr11	+	94502968	94503133	True	NM_016403,NM_130847	chr11,chr11	-,+	CWC15,AMOTL1	203694,-1518
chr17:74580436-74580942	chr17	+	74580725	74580842	True	NM_006456,NR_004395	chr17,chr17	-,+	ST6GALNAC2,SNORD1A	1364,-23061
chr11:5411113-5411990	chr11	+	5411212	5412015	True	NM_001005567,NM_001004756	chr11,chr11	-,+	OR51B5,OR51M1	-46458,-657
chr8:95731714-95731966	chr8	+	95731713	95731869	True	NM_181787,NR_034034	chr8,chr8	+,-	DPY19L4,LOC100288748	233,-80018
chr1:113614495-113615745	chr1	+	113614495	113615713	True	NM_003051,NM_014813	chr1,chr1	-,+	SLC16A1,LRIG2	-115520,117
chr9:125134238-125135789	chr9	+	125134394	125135632	True	NM_080591,NM_001004451,NM_000962	chr9,chr9,chr9	+,-,+	PTGS1,OR1J1,PTGS1	-1216,104623,-1216
chr13:36675253-36675638	chr13	+	36675300	36675641	True	NM_001111046,NM_004734	chr13,chr13	+,-	CCNA1,DCLK1	330325,29930
chr1:153330255-153331706	chr1	+	153330448	153331698	True	NM_020393,NM_002965	chr1,chr1	-,+	PGLYRP4,S100A9	-9426,-169
chr9:35665361-35665950	chr9	+	35665450	35665988	True	NM_032818,NM_001216,NM_001195201,NM_001195200,NR_003051,NM_001195217,NM_174923	chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,+,+,+,-,+,+	C9orf100,CA9,CCDC107,CCDC107,RMRP,CCDC107,CCDC107	-172,7926,-7214,-7214,-7435,-7214,-7214
chr12:102224873-102226487	chr12	+	102224906	102226024	True	NM_018370,NM_024312	chr12,chr12	+,-	DRAM1,GNPTAB	45080,-261
chr19:8386943-8388033	chr19	+	8386997	8388078	True	NM_005001,NM_001031	chr19,chr19	-,+	NDUFA7,RPS28	-717,-664
chr12:102273691-102274784	chr12	+	102274392	102274766	True	NM_018370,NM_024312	chr12,chr12	+,-	DRAM1,GNPTAB	-3346,-49747
chr6:158257916-158259135	chr6	+	158258053	158258952	True	NM_016224,NM_032861	chr6,chr6	+,-	SNX9,SERAC1	-13810,330419
chr12:123866232-123866654	chr12	+	123866389	123866528	True	NM_020382,NM_018183	chr12,chr12	+,-	SETD8,SBNO1	2175,-31401
chr17:54910855-54911056	chr17	+	54910923	54910999	True	NM_001085430,NM_003647	chr17,chr17	-,+	C17orf67,DGKE	-17673,460
chr17:79760083-79760775	chr17	+	79760179	79760701	True	NM_000160,NM_001093767	chr17,chr17	+,-	GCGR,FAM195B	1308,30516
chr6:27178375-27178875	chr6	+	27178510	27178669	True	NM_005865,NM_080593	chr6,chr6	+,-	PRSS16,HIST1H2BK	36832,-63873
chr16:84653529-84655420	chr16	+	84653649	84655237	True	NM_024731,NM_021149	chr16,chr16	+,-	KLHL36,COTL1	26893,-1980
chr4:39530514-39530863	chr4	+	39530618	39530764	True	NR_026854,NM_001184701,NM_001184700,NM_003359	chr4,chr4,chr4,chr4	+,-,-,-	LOC401127,UGDH,UGDH,UGDH	-48794,-1400,-1400,-1400
chr7:155753662-155755055	chr7	+	155753741	155754989	True	NM_000193,NM_053043	chr7,chr7	-,+	SHH,RBM33	-148774,-316601
chr1:903145-903443	chr1	+	903177	903441	True	NM_015658,NM_198317,NM_001160184,NM_032129	chr1,chr1,chr1,chr1	-,+,+,+	NOC2L,KLHL17,PLEKHN1,PLEKHN1	-8498,-7261,-1351,-1351
chrX:23921409-23922714	chrX	+	23921879	23922583	True	NM_024122,NM_001169574,NR_026545,NM_152761	chrX,chrX,chrX,chrX	-,+,-,+	APOO,CXorf58,APOO,CXorf58	3530,3539,3530,3539
chr13:31487663-31487897	chr13	+	31487662	31487834	True	NM_006644,NM_032849	chr13,chr13	-,+	HSPH1,C13orf33	248343,-7401
chr20:57227401-57227606	chr20	+	57227456	57227642	True	NR_037945,NR_037941,NR_037943,NR_037942,NM_153360,NM_001134773,NM_001134772,NM_003763,NM_001204868,NM_001001433	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,+,+,+,-,+,+,+,+,+	STX16-NPEPL1,STX16,STX16,STX16,APCDD1L,STX16,STX16,STX16,STX16,STX16	-1200,-1200,-1200,-1200,-137507,-1200,-1200,-1200,-1200,-1200
chr19:59070039-59070323	chr19	+	59070176	59070372	True	NM_198426,NR_027334,NM_003969,NM_014453	chr19,chr19,chr19,chr19	-,+,-,-	CHMP2A,LOC100131691,UBE2M,CHMP2A	-3821,180,21,-3690
chr1:214777340-214778926	chr1	+	214777556	214778674	True	NM_016343,NM_005401	chr1,chr1	+,-	CENPF,PTPN14	-1075,-52532
chr11:66406369-66406742	chr11	+	66406496	66406766	True	NM_002896,NM_001198844,NM_031492,NM_001198843	chr11,chr11,chr11,chr11	+,+,-,+	RBM4,RBM4,RBM4B,RBM4	-459,-459,38559,-459
chr5:177559296-177560700	chr5	+	177559550	177560393	True	NM_022762,NM_001034833	chr5,chr5	+,-	RMND5B,NHP2	-1573,20619
chr16:57221119-57222550	chr16	+	57221347	57222283	True	NM_133368,NM_024946	chr16,chr16	+,-	RSPRY1,FAM192A	-1157,-1371
chr3:52740504-52740872	chr3	+	52740589	52740885	True	NM_001010983,NM_152932,NM_014041,NM_018446	chr3,chr3,chr3,chr3	-,-,+,-	GLT8D1,GLT8D1,SPCS1,GLT8D1	-541,-2967,-783,-541
chr8:28241275-28242654	chr8	+	28241420	28242583	True	NM_018660,NM_006228	chr8,chr8	-,+	ZNF395,PNOC	1444,-66822
chr1:45273549-45273931	chr1	+	45273614	45273836	True	NM_001013632,NM_004073,NM_001136537	chr1,chr1,chr1	-,+,+	TCTEX1D4,PLK3,BTBD19	-657,-7629,317
chr20:60723268-60723989	chr20	+	60723676	60723972	True	NM_198935,NM_002792	chr20,chr20	+,-	SS18L1,PSMA7	-4905,-5202
chr2:118772049-118772330	chr2	+	118772051	118772287	True	NM_019044,NM_016133	chr2,chr2	-,+	CCDC93,INSIG2	-312,73762
chr4:7196350-7197066	chr4	+	7196441	7197011	True	NM_020777,NR_027441	chr4,chr4	+,-	SORCS2,FLJ36777	-2118,-91338
chr15:100883270-100885070	chr15	+	100883381	100885063	True	NR_028140,NM_024708,NM_139057,NR_028139	chr15,chr15,chr15,chr15	-,+,-,-	FLJ42289,ASB7,ADAMTS17,FLJ42289	5425,257691,-1198,5910
chr6:132270546-132271181	chr6	+	132270578	132271049	True	NM_006208,NM_001901	chr6,chr6	+,-	ENPP1,CTGF	-141473,1519
chr7:76111020-76112096	chr7	+	76111043	76112053	True	NR_003262,NM_001102596	chr7,chr7	-,+	FDPSL2A,DTX2	-6726,-1269
chr7:76111020-76112096	chr7	+	76609600	76610166	False	NR_023383,NM_006682	chr7,chr7	+,-	PMS2P11,FGL2	-28,219034
chr16:75153217-75154590	chr16	+	75153218	75154401	True	NM_153486,NM_194436,NM_153688	chr16,chr16,chr16	-,-,+	LDHD,LDHD,ZFP1	-2548,-2548,28019
chr20:31671759-31672665	chr20	+	31671842	31672594	True	NM_182519,NM_080675	chr20,chr20	+,-	C20orf186,SUN5	-2575,-79603
chr6:32296012-32297859	chr6_qbl_hap6	+	3558318	3558894	False	NM_019111,NM_006781	chr6_qbl_hap6,chr6_qbl_hap6	+,-	HLA-DRA,C6orf10	109592,41686
chr6:32296012-32297859	chr6_dbb_hap3	+	3576391	3576967	False	NM_019111,NM_006781	chr6_dbb_hap3,chr6_dbb_hap3	+,-	HLA-DRA,C6orf10	108764,41667
chr6:32296012-32297859	chr6_mann_hap4	+	3639955	3640531	False	NM_019111,NM_006781	chr6_mann_hap4,chr6_mann_hap4	+,-	HLA-DRA,C6orf10	109147,42020
chr6:32296012-32297859	chr6	+	32297116	32297692	True	NM_019111,NM_006781	chr6,chr6	+,-	HLA-DRA,C6orf10	109926,42020
chr6:32296012-32297859	chr6_cox_hap2	+	3767922	3768498	False	NM_019111,NM_006781	chr6_cox_hap2,chr6_cox_hap2	+,-	HLA-DRA,C6orf10	109575,41674
chr3:151037109-151038593	chr3	+	151037117	151038617	True	NM_053002,NM_176894,NM_023915	chr3,chr3,chr3	+,-,-	MED12L,P2RY13,GPR87	-232500,8770,-2481
chr12:53243056-53243548	chr12	+	53243156	53243536	True	NM_173352,NM_199187	chr12,chr12	-,+	KRT78,KRT18	-378,99118
chr9:33290188-33290494	chr9	+	33290308	33290500	True	NM_147134,NM_002504,NM_004323,NM_147133	chr9,chr9,chr9,chr9	+,+,-,+	NFX1,NFX1,BAG1,NFX1	-17,-17,-25549,-17
chr5:179285249-179285472	chr5	+	179285441	179285509	True	NM_003900,NM_001017987,NM_016175	chr5,chr5,chr5	+,-,-	SQSTM1,C5orf45,C5orf45	-37650,381,381
chr4:107235940-107236288	chr4	+	107236068	107236292	True	NM_004757,NM_001142415,NM_001142416,NM_033115,NM_001163436,NM_001163437,NM_001163435	chr4,chr4,chr4,chr4,chr4,chr4,chr4	+,+,+,-,-,-,-	AIMP1,AIMP1,AIMP1,TBCK,TBCK,TBCK,TBCK	560,474,1371,1181,1619,1181,1181
chr17:18130269-18130629	chr17	+	18130270	18130556	True	NM_004140,NM_002018	chr17,chr17	+,-	LLGL1,FLII	-1385,31549
chr20:523367-524066	chr20	+	523400	524092	True	NM_031229,NM_177560,NM_001895,NM_177559	chr20,chr20,chr20,chr20	+,-,-,-	RBCK1,CSNK2A1,CSNK2A1,CSNK2A1	-134749,440,440,440
chr6:169652787-169653007	chr6	+	169652841	169653043	True	NM_001029863,NM_003247	chr6,chr6	+,-	C6orf120,THBS2	449213,1144
chr1:104198547-104200183	chr1	+	104198630	104200200	True	NM_004038,NM_001008221,NM_001008218,NM_001008219	chr1,chr1,chr1,chr1	+,+,+,+	AMY1A,AMY1A,AMY1B,AMY1C	-391,-552,-368,-390
chr1:104198547-104200183	chr1	+	104292768	104294339	False	NM_004038,NM_001008221,NM_001008218,NM_001008219	chr1,chr1,chr1,chr1	+,+,+,+	AMY1A,AMY1A,AMY1B,AMY1C	-391,-552,-368,-390
chr1:104198547-104200183	chr1	-	104237013	104238583	False	NM_004038,NM_001008221,NM_001008218,NM_001008219	chr1,chr1,chr1,chr1	-,-,-,-	AMY1A,AMY1A,AMY1B,AMY1C	391,552,368,390
chr10:30638501-30639236	chr10	+	30638958	30639234	True	NM_018109,NM_005204	chr10,chr10	-,+	MTPAP,MAP3K8	-691,83631
chr8:23337268-23337787	chr8	+	23337365	23337683	True	NM_016612,NM_001128930	chr8,chr8	+,-	SLC25A37,ENTPD4	48679,-22121
chr1:51580249-51580736	chr1	+	51580498	51580658	True	NM_001136508,NM_007051	chr1,chr1	+,-	C1orf185,FAF1	-12657,-154562
chr17:66035053-66035616	chr17	+	66035123	66035626	True	NM_002266,NM_181656	chr17,chr17	+,-	KPNA2,C17orf58	-3332,-45358
chr8:101662012-101662825	chr8	+	101662072	101662809	True	NR_033962,NM_152628	chr8,chr8	+,-	FLJ42969,SNX31	401472,-179
chr21:40760020-40760369	chr21	+	40760237	40760361	True	NM_004627,NM_004965,NM_001146218	chr21,chr21,chr21	+,-,+	WRB,HMGN1,WRB	-8075,-39190,-596
chr1:187259118-187260244	chr1	+	187259426	187260105	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-609867,-461445
chr6:131898159-131898967	chr6	+	131898171	131898740	True	NM_015979,NM_000045	chr6,chr6	-,+	MED23,ARG1	50684,-3857
chr13:51682565-51683939	chr13	+	51682680	51683981	True	NR_003923,NM_145019	chr13,chr13	-,+	GUCY1B2,FAM124A	-42387,112525
chr14:100627059-100627272	chr14	+	100627065	100627319	True	NM_003403,NM_206918	chr14,chr14	+,-	YY1,DEGS2	77782,-1053
chr12:776984-778536	chr12	+	777169	778358	True	NM_001184985,NM_016533	chr12,chr12	+,-	WNK1,NINJ2	83730,-4414
chr17:30591466-30592088	chr17	+	30591628	30591926	True	NM_022344,NM_138328	chr17,chr17	-,+	C17orf75,RHBDL3	77313,1268
chr3:52090810-52091358	chr3	+	52090812	52091306	True	NM_001198898,NR_027331,NM_001947	chr3,chr3,chr3	+,-,-	ACY1,C3orf74,DUSP7	-73563,7872,-351
chr17:37411950-37413328	chr17	+	37412098	37413096	True	NM_198993,NM_000981	chr17,chr17	-,+	STAC2,RPL19	-30058,-55613
chr17:44367537-44369078	chr17_ctg5_hap1	-	497630	497723	False	NM_001193465,NM_014834	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	KIAA1267,LRRC37A	65774,-39026
chr17:44367537-44369078	chr17	+	44368251	44368343	True	NM_001193465,NM_014834	chr17,chr17	-,+	KIAA1267,LRRC37A	-65511,4153
chr6:117584697-117585665	chr6	+	117584903	117585553	True	NM_002944,NM_182645,NM_153453	chr6,chr6,chr6	-,+,+	ROS1,VGLL2,VGLL2	161517,1183,1167
chr21:37533876-37535392	chr21	+	37534001	37535319	True	NM_017438,NM_005128	chr21,chr21	-,+	SETD4,DOPEY2	-101185,1519
chr14:91284809-91285678	chr14	+	91284813	91285454	True	NM_001010854,NM_001102366	chr14,chr14	-,+	TTC7B,C14orf159	-2052,294902
chr2:95822931-95824620	chr2	+	95823272	95824313	True	NM_021088,NM_032788,NM_001017396	chr2,chr2,chr2	+,-,+	ZNF2,ZNF514,ZNF2	6869,1000,6869
chr12:52701969-52702329	chr12	+	52702010	52702372	True	NM_002284,NM_002282	chr12,chr12	+,-	KRT86,KRT83	-6412,12860
chr7:83223071-83223587	chr7	+	83223084	83223626	True	NM_001178129,NM_001127444	chr7,chr7	-,+	SEMA3E,CD36	47171,-2947374
chr10:115423648-115424941	chr10	+	115423721	115424835	True	NM_006175,NM_033340,NM_198060	chr10,chr10,chr10	-,+,-	NRAP,CASP7,NRAP	84,14099,84
chr11:65363061-65363348	chr11	+	65363078	65363238	True	NM_001099409,NM_033347,NM_005714,NM_033348,NM_033455	chr11,chr11,chr11,chr11,chr11	+,-,-,-,-	EHBP1L1,KCNK7,KCNK7,KCNK7,KCNK7	-19620,279,279,279,279
chr1:32404908-32406816	chr1	+	32405052	32406827	True	NM_006559,NM_080391	chr1,chr1	+,-	KHDRBS1,PTP4A2	72663,-1064
chr19:38212202-38214015	chr19	+	38212201	38213507	True	NM_001172226,NM_032689,NM_001172677	chr19,chr19,chr19	+,-,-	ZNF540,ZNF607,ZNF607	-126522,-1510,-2112
chr22:42088506-42089600	chr22	+	42089114	42089448	True	NM_001003796,NM_001142964,NM_152513	chr22,chr22,chr22	-,+,+	NHP2L1,C22orf46,MEI1	-4201,-2621,6069
chr20:23110707-23111156	chr20	+	23110711	23111155	True	NR_034149,NM_001052	chr20,chr20	-,+	LOC200261,SSTR4	2168,-94705
chr11:4414759-4415201	chr11	+	4414873	4415249	True	NM_003141,NM_001005172	chr11,chr11	-,+	TRIM21,OR52K2	35,55275
chr5:122423201-122423431	chr5	+	122423241	122423379	True	NM_001136239,NM_000943	chr5,chr5	+,-	PRDM6,PPIC	1461,-50816
chr20:34203493-34203763	chr20	+	34203638	34203784	True	NR_024377,NM_003116	chr20,chr20	-,+	FER1L4,SPAG4	-8154,24
chr19:56045928-56046703	chr19	+	56046487	56046747	True	NM_001144950,NM_001101401	chr19,chr19	+,-	SSC5D,SBK2	-46668,1738
chr2:74699882-74700192	chr2	+	74699988	74700226	True	NM_053050,NM_001146158,NR_027749,NM_006302,NM_022492	chr2,chr2,chr2,chr2,chr2	-,-,+,-,+	MRPL53,MOGS,TTC31,MOGS,TTC31	-46,-7451,9973,-7451,9973
chr5:68715825-68716048	chr5	+	68715837	68716077	True	NM_001015892,NM_001038603	chr5,chr5	-,+	TAF9,MARVELD2	-49997,-4956
chr5:748241-748626	chr5	+	748240	748632	True	NM_018140,NM_007030	chr5,chr5	+,-	CEP72,TPPP	-135886,-54730
chr5:748241-748626	chr5	+	840405	840455	False	NM_001166260,NM_024786	chr5,chr5	+,-	TRIP13,ZDHHC11	52513,10696
chr16:24740975-24741190	chr16	+	24741036	24741204	True	NM_001006634,NM_014494	chr16,chr16	-,+	ARHGAP17,TNRC6A	285521,-38
chr10:101088826-101089075	chr10	+	101088829	101088953	True	NM_021828,NM_020348	chr10,chr10	-,+	HPSE2,CNNM1	-93197,-24
chr2:86784018-86784530	chr2	+	86784022	86784530	True	NM_016079,NM_001146688,NR_036454,NM_001193517,NM_001005753	chr2,chr2,chr2,chr2,chr2	-,+,-,-,-	VPS24,KDM3A,VPS24,VPS24,VPS24	6140,-115489,6140,6140,6140
chr3:3075699-3076387	chr3	+	3075750	3076296	True	NM_000564,NM_182916	chr3,chr3	-,+	IL5RA,TRNT1	75812,92303
chr2:74710203-74710665	chr2	+	74710312	74710558	True	NM_032779,NR_027749,NM_022492	chr2,chr2,chr2	-,+,+	CCDC142,TTC31,TTC31	45,-163,-163
chr13:88323830-88324175	chr13	+	88323902	88324044	True	NM_015567,NR_033829	chr13,chr13	+,-	SLITRK5,LOC642345	825,-684
chr1:159169655-159170776	chr1	+	159169797	159170661	True	NM_002036,NR_037870,NM_001122951	chr1,chr1,chr1	+,-,+	DARC,LOC100131825,DARC	3141,1601,4387
chr19:51414343-51414594	chr19	+	51414349	51414573	True	NM_004917,NM_005551	chr19,chr19	-,+	KLK4,KLK2	-355,-37711
chr13:49576214-49577494	chr13	+	49576746	49577097	True	NM_030925,NM_001079673	chr13,chr13	-,+	CAB39L,FNDC3A	398695,-26753
chr22:18630758-18631807	chr22	+	18630895	18631837	True	NM_001136004,NM_017414	chr22,chr22	-,+	MICAL3,USP18	-123570,920
chr7:102716272-102717136	chr7	+	102716368	102716934	True	NM_001111038,NM_001161012,NM_001161013,NM_001161010,NM_001161011,NM_001161009,NM_031905,NM_145032	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,+,+,+,-	FBXL13,ARMC10,ARMC10,ARMC10,ARMC10,ARMC10,ARMC10,FBXL13	-1080,-1091,-1091,-1091,-1091,-1091,-1091,-1353
chr3:9992550-9993103	chr3	+	9992684	9992855	True	NM_207351,NM_001077415	chr3,chr3	-,+	PRRT3,CRELD1	1274,-17210
chr9:33273838-33274736	chr9	+	33273837	33274524	True	NM_001172415,NM_001195536,NM_004323,NM_016410	chr9,chr9,chr9,chr9	-,+,-,+	BAG1,CHMP5,BAG1,CHMP5	-9078,-9023,-9078,-9023
chr9:133567892-133568182	chr9	+	133568062	133568220	True	NM_014285,NR_027440	chr9,chr9	+,-	EXOSC2,LOC100272217	937,-113181
chr2:48011916-48012254	chr2	+	48011918	48012304	True	NM_025133,NM_000179	chr2,chr2	-,+	FBXO11,MSH6	103606,-1748
chr15:75574529-75574958	chr15	+	75574619	75574725	True	NR_030360,NM_001145224	chr15,chr15	-,+	MIR631,GOLGA6D	71365,456
chr15:75574529-75574958	chr15	+	72946481	72946587	False	NR_002780,NM_018652	chr15,chr15	-,+	HIGD2B,GOLGA6B	31967,450
chr15:75574529-75574958	chr15	+	75550342	75550448	False	NR_030360,NM_001164404	chr15,chr15	-,+	MIR631,GOLGA6C	95642,450
chr15:75574529-75574958	chr15	-	74375341	74375447	False	NM_001130136,NM_001038640	chr15,chr15	+,-	ISLR2,GOLGA6A	46267,-450
chr21:33782514-33782968	chr21	+	33782635	33783013	True	NM_058187,NM_014825	chr21,chr21	+,-	C21orf63,URB1	1738,-17323
chr8:82167109-82168170	chr8	+	82167141	82168118	True	NM_001444,NM_018440	chr8,chr8	+,-	FABP5,PAG1	24599,-142838
chrX:30648272-30648693	chrX	+	30648308	30648666	True	NM_000167,NM_025159	chrX,chrX	+,-	GK,CXorf21	22809,-52275
chr12:72155178-72156244	chr12	+	72155585	72155948	True	NM_014999,NR_024072	chr12,chr12	+,-	RAB21,MRS2P2	-6982,88878
chr6:17394418-17394773	chr6	+	17394602	17394808	True	NM_006366,NM_005124	chr6,chr6	+,-	CAP2,NUP153	-917,312060
chr20:45946427-45946889	chr20	+	45946434	45946906	True	NR_024594,NM_012408	chr20,chr20	+,-	LOC100131496,ZMYND8	339,38618
chr11:105479955-105480345	chr11	+	105479959	105480395	True	NM_032424,NM_001077243,NM_001112812,NM_001077244,NM_000829	chr11,chr11,chr11,chr11,chr11	-,+,+,+,+	KIAA1826,GRIA4,GRIA4,GRIA4,GRIA4	412615,404,1015,404,404
chr15:73345348-73346027	chr15	+	73345466	73346075	True	NM_001172623,NM_002499,NR_023319,NM_001172624	chr15,chr15,chr15,chr15	+,+,-,+	NEO1,NEO1,ADPGK,NEO1	-693,-693,-269340,-693
chr2:241498159-241499655	chr2	+	241498407	241499620	True	NM_001033575,NM_017844,NM_016552,NM_018226	chr2,chr2,chr2,chr2	+,-,-,+	DUSP28,ANKMY1,ANKMY1,RNPEPL1	-150,-1002,-1002,8383
chr1:31846724-31847129	chr1	+	31846724	31847019	True	NM_001199038,NM_004102	chr1,chr1	+,-	SERINC2,FABP3	35392,-801
chr12:11177738-11178615	chr12	+	11177820	11178632	True	NM_176888,NM_001110213,NM_176885	chr12,chr12,chr12	-,+,-	TAS2R19,PRH2,TAS2R31	-2650,-96046,5428
chr3:137832122-137832636	chr3	+	137832124	137832547	True	NM_014154,NM_173543,NM_001170538	chr3,chr3,chr3	+,-,-	ARMC8,DZIP1L,DZIP1L	73600,1954,-41
chrX:69643034-69643311	chrX	+	69643085	69643249	True	NM_001171192,NM_001171193,NM_017711,NM_001171191,NM_016484	chrX,chrX,chrX,chrX,chrX	+,+,+,+,-	GDPD2,GDPD2,GDPD2,GDPD2,PDZD11	-255,-255,-255,-255,-133287
chr11:69925121-69925658	chr11	+	69925242	69925676	True	NM_005247,NM_018043,NR_030691	chr11,chr11,chr11	-,+,+	FGF3,ANO1,ANO1	-291050,-885,5839
chr1:110160629-110162109	chr1	+	110160824	110162143	True	NM_139156,NM_005272,NM_203404,NM_004037	chr1,chr1,chr1,chr1	+,-,+,+	AMPD2,GNAT2,AMPD2,AMPD2	315,-5119,5905,1132
chr6:159470437-159471329	chr6	+	159470443	159471103	True	NM_054114,NM_152133,NM_138810,NM_032532	chr6,chr6,chr6,chr6	-,-,-,+	TAGAP,TAGAP,TAGAP,FNDC1	-4259,-4259,-4259,119325
chr16:88871461-88871661	chr16	+	88871512	88871706	True	NM_000485,NM_001030018,NM_030928	chr16,chr16,chr16	-,-,+	APRT,APRT,CDT1	6686,6686,-1377
chr2:135673211-135674836	chr2	+	135673370	135674503	True	NM_058241,NM_001241,NR_037649,NR_036549	chr2,chr2,chr2,chr2	+,+,+,-	CCNT2,CCNT2,CCNT2,LOC100129961	1888,1888,1888,1730
chr2:122513480-122514135	chr2	+	122513672	122514012	True	NM_032390,NM_004622	chr2,chr2	-,+	MKI67IP,TSN	-19169,-602
chr2:29033098-29033368	chr2	+	29033098	29033352	True	NM_182756,NM_001142634,NM_001008779,NM_017910	chr2,chr2,chr2,chr2	+,+,+,-	SPDYA,SPDYA,SPDYA,TRMT61B	347,347,5510,59873
chr14:51560301-51560659	chr14	+	51560336	51560524	True	NM_052978,NM_015163,NM_030755	chr14,chr14,chr14	-,-,+	TRIM9,TRIM9,TMX1	1948,1948,146361
chr5:95297811-95298911	chr5	+	95298110	95298780	True	NR_026936,NM_012081	chr5,chr5	+,-	C5orf27,ELL2	-110225,-335
chr3:50272127-50272665	chr3	+	50272208	50272676	True	NM_002070,NM_006764	chr3,chr3	+,-	GNAI2,IFRD2	970,57400
chr17:7296740-7297019	chr17	+	7296770	7296840	True	NM_020360,NM_003985,NM_001201576	chr17,chr17,chr17	-,+,-	PLSCR3,TNK1,PLSCR3	1372,-12457,1372
chr7:5233501-5234970	chr7	+	5233542	5234654	True	NM_016003,NM_015610,NR_034163,NM_001033519,NM_001033518	chr7,chr7,chr7,chr7,chr7	+,+,-,+,+	WIPI2,WIPI2,ZNF890P,WIPI2,WIPI2	-3758,-3758,-49365,-3758,-3758
chr20:58569640-58570308	chr20	+	58569677	58570205	True	NM_021810,NM_006242	chr20,chr20	+,-	CDH26,PPP1R3D	1211,-54325
chr10:74869727-74871029	chr10	+	74869734	74870771	True	NM_001142596,NM_015901	chr10,chr10	-,+	P4HA1,NUDT13	-13002,-62
chr22:46689278-46690454	chr22	+	46689443	46689930	True	NR_024009,NM_016426	chr22,chr22	-,+	CN5H6.4,GTSE1	2678,2707
chr11:2444237-2444864	chr11	+	2444252	2444810	True	NM_005706,NM_014555	chr11,chr11	+,-	TSSC4,TRPM5	-20780,23
chr1:11360146-11360556	chr1	+	11360179	11360263	True	NM_004958,NM_013319	chr1,chr1	-,+	MTOR,UBIAD1	-37571,-26975
chr6:14999156-15000157	chr6	+	14999427	15000012	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	246514,663334
chr17:48913425-48913659	chr17	+	48913436	48913698	True	NM_005749,NM_175575	chr17,chr17	-,+	TOB1,WFIKKN2	27765,-882
chr12:54984942-54985522	chr12	+	54985008	54985490	True	NM_006741,NM_001165975	chr12,chr12	-,+	PPP1R1A,PDE1B	-2565,-29960
chr4:146097991-146098841	chr4	+	146097997	146098871	True	NM_002940,NM_017493,NM_001102653	chr4,chr4,chr4	+,-,-	ABCE1,OTUD4,OTUD4	-78892,-2101,2011
chr5:6633598-6633839	chr5	+	6633739	6633827	True	NM_017755,NR_037947,NM_001193455,NM_001047	chr5,chr5,chr5,chr5	-,-,-,+	NSUN2,NSUN2,NSUN2,SRD5A1	-266,-266,-266,-290
chr12:31403274-31403763	chr12	+	31403323	31403474	True	NR_026806,NM_001135811	chr12,chr12	+,-	FLJ13224,FAM60A	73775,75704
chr18:77154780-77155059	chr18	+	77154856	77155052	True	NM_006162,NM_172388,NM_172389,NM_172387,NM_001146343,NM_172390	chr18,chr18,chr18,chr18,chr18,chr18	+,+,+,+,-,+	NFATC1,NFATC1,NFATC1,NFATC1,PQLC1,NFATC1	719,719,5273,5273,556651,719
chr14:105444082-105444291	chr14	+	105444114	105444306	True	NM_174891,NM_138420	chr14,chr14	+,-	C14orf79,AHNAK2	8309,438
chr5:176924817-176925149	chr5	+	176924889	176925135	True	NM_213636,NM_001174102,NM_203352,NM_005451	chr5,chr5,chr5,chr5	-,+,-,-	PDLIM7,PRR7,PDLIM7,PDLIM7	-287,-49614,-287,-287
chr9:34380396-34380814	chr9	+	34380453	34380727	True	NM_147168,NM_147169,NM_020702,NM_147173	chr9,chr9,chr9,chr9	-,-,-,+	C9orf24,C9orf24,KIAA1161,NUDT2	921,921,-3559,-51000
chr20:67935-68790	chr20	+	67935	68730	True	NM_153325,NM_001037732	chr20,chr20	+,-	DEFB125,DEFB128	55,101595
chr18:56337940-56338156	chr18	+	56337983	56338203	True	NM_006785,NM_052947,NM_173844	chr18,chr18,chr18	+,-,+	MALT1,ALPK2,MALT1	414,-41794,414
chr13:45915916-45916445	chr13	+	45916003	45916219	True	NR_002967,NM_003295,NR_024458	chr13,chr13,chr13	-,-,+	SNORA31,TPT1,LOC100190939	-4259,-706,-574
chr8:11322241-11322610	chr8	+	11322268	11322650	True	NM_001715,NM_053279	chr8,chr8	+,-	BLK,FAM167A	28870,1676
chr16:1834700-1835133	chr16	+	1834729	1835161	True	NM_080861,NM_001146006,NR_027389,NM_012225,NM_004970	chr16,chr16,chr16,chr16,chr16	-,-,-,+,-	SPSB3,IGFALS,IGFALS,NUBP2,IGFALS	-2148,8623,9798,-1848,8623
chr9:139653291-139653615	chr9	+	139653434	139653498	True	NM_203347,NM_178469,NR_033913	chr9,chr9,chr9	-,-,+	LCN15,LCN8,LOC100128593	5517,-703,-12872
chr10:72200872-72201103	chr10	+	72200878	72201028	True	NM_018055,NM_004096	chr10,chr10	-,+	NODAL,EIF4EBP2	487,-37068
chr19:46283021-46283703	chr19	+	46283057	46283699	True	NM_001081563,NM_001081562,NM_004409,NM_001081560,NM_004497	chr19,chr19,chr19,chr19,chr19	-,-,-,-,+	DMPK,DMPK,DMPK,DMPK,FOXA3	212,2166,2166,2166,83818
chr11:112041208-112042195	chr11	+	112041342	112042241	True	NM_001562,NM_031938,NM_001037290,NM_031275	chr11,chr11,chr11,chr11	-,+,+,+	IL18,BCO2,BCO2,TEX12	-6502,3966,4847,-3308
chr6:43544838-43545537	chr6	+	43545009	43545499	True	NM_020750,NM_006502	chr6,chr6	-,+	XPO5,POLH	-1197,-1196
chr19:39880913-39881524	chr19	+	39880941	39881273	True	NM_019088,NM_017592	chr19,chr19	-,+	PAF1,MED29	456,689
chr17:53498345-53498592	chr17	+	53498391	53498543	True	NM_002126,NM_012329	chr17,chr17	+,-	HLF,MMD	-156121,848
chr1:36234260-36234835	chr1	+	36234358	36234847	True	NM_022111,NM_017629,NM_001190481	chr1,chr1,chr1	-,+,-	CLSPN,EIF2C4,CLSPN	754,38980,754
chr15:83315259-83315546	chr15	+	83315350	83315534	True	NM_030594,NR_003011	chr15,chr15	-,+	CPEB1,SCARNA15	1244,109162
chr2:97761231-97761572	chr2	+	97761296	97761614	True	NM_199336,NM_001164315	chr2,chr2	-,+	FAHD2B,ANKRD36	-714,17618
chr9:139889153-139889655	chr9	+	139889156	139889704	True	NM_004669,NM_183241	chr9,chr9	-,+	CLIC3,C9orf142	1370,-2337
chr5:6869184-6870823	chr5	+	6869216	6870737	True	NM_001171806,NR_036242	chr5,chr5	+,-	PAPD7,MIR4278	-123166,-41182
chr7:65538541-65539545	chr7	+	65538888	65539253	True	NM_000181,NM_001024943,NM_001024944,NM_001024946,NM_000048	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	GUSB,ASL,ASL,ASL,ASL	-91587,1580,1580,1580,1522
chr11:45946090-45946423	chr11	+	45946136	45946396	True	NM_152312,NM_004813,NM_057174	chr11,chr11,chr11	+,-,-	GYLTL1B,PEX16,PEX16	-2991,-6462,-6462
chr1:224311734-224312575	chr1	+	224311859	224312352	True	NR_031574,NM_015176	chr1,chr1	-,+	MIR320B2,FBXO28	132552,-10133
chr17:34205244-34206530	chr17	+	34205333	34206348	True	NM_002985,NM_003487,NM_152781	chr17,chr17,chr17	-,+,-	CCL5,TAF15,C17orf66	1088,-68896,-9438
chr1:28261476-28263244	chr1	+	28261614	28262599	True	NM_001009568,NM_002946,NM_014474	chr1,chr1,chr1	+,-,+	SMPDL3B,RPA2,SMPDL3B	-161,-20378,-161
chr1:223195615-223195861	chr1	+	223195621	223195895	True	NM_032890,NM_003268	chr1,chr1	+,-	DISP1,TLR5	-207241,120779
chrX:44338042-44339782	chrX	+	44338247	44339697	True	NM_022076,NM_173794	chrX,chrX	+,-	DUSP21,FUNDC1	363551,62574
chr19:7737597-7739362	chr19	+	7737747	7739319	True	NM_001193374,NM_001042461,NM_174894,NM_174918,NM_002002,NM_020415,NM_001042462	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,-,+,+	RETN,TRAPPC5,TRAPPC5,C19orf59,FCER2,RETN,TRAPPC5	-3827,6444,6441,2623,27763,-3827,6387
chr10:118897698-118897974	chr10	+	118897827	118897979	True	NM_001112704,NM_199131,NM_181840	chr10,chr10,chr10	-,-,+	VAX1,VAX1,KCNK18	-15,-15,59020
chr3:120627146-120627780	chr3	+	120627160	120627772	True	NM_173825,NM_014980	chr3,chr3	-,+	RABL3,STXBP5L	-165776,-161
chr19:34176772-34177376	chr19	+	34176817	34177361	True	NM_001166057,NM_022467	chr19,chr19	-,+	PEPD,CHST8	-164018,-1434
chr21:37693018-37694760	chr21	+	37693233	37694665	True	NM_012130,NM_015358	chr21,chr21	-,+	CLDN14,MORC3	144113,-797
chr12:128893957-128894422	chr12	+	128893956	128894416	True	NM_145648,NR_037406	chr12,chr12	-,+	SLC15A4,MIR3612	414185,-115370
chr6:155422325-155423128	chr6	+	155422333	155422730	True	NM_012454,NM_016020	chr6,chr6	+,-	TIAM2,TFB1M	-10961,212937
chr11:36317051-36318682	chr11	+	36317219	36318453	True	NM_014186,NM_001101653,NM_001160167	chr11,chr11,chr11	-,-,+	COMMD9,COMMD9,PRR5L	-6220,-6220,57
chr11:2710836-2711332	chr11	+	2710841	2711253	True	NR_024627,NR_002728	chr11,chr11	+,-	KCNQ1DN,KCNQ1OT1	180009,10025
chr5:16180932-16181949	chr5	+	16180937	16181965	True	NM_012304,NM_001102562	chr5,chr5	+,-	FBXL7,MARCH11	-680690,-1040
chr5:154136994-154137630	chr5	+	154137018	154137548	True	NM_015315,NM_032385	chr5,chr5	+,-	LARP1,C5orf4	-44608,92716
chr7:33091816-33092890	chr7	+	33092261	33092741	True	NM_001033604,NM_001002010,NR_029372	chr7,chr7,chr7	+,-,-	BBS9,NT5C3,NT5C3	76410,9718,9718
chr12:33054266-33056075	chr12	+	33054466	33056098	True	NM_001005242,NM_004572,NM_012063	chr12,chr12,chr12	-,-,+	PKP2,PKP2,DNM1L	-4686,-4686,-222380
chr9:98170200-98171083	chr9	+	98170432	98171098	True	NM_000136,NR_029496	chr9,chr9	-,+	FANCC,MIR24-1	-90441,-322181
chr1:23672122-23672330	chr1	+	23672226	23672296	True	NR_033690,NM_001102398,NM_001102399,NM_005826,NM_001102397	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	C1orf213,HNRNPR,HNRNPR,HNRNPR,HNRNPR	23167,-1373,-1373,-1373,-1373
chr1:172412887-172413092	chr1	+	172412891	172413141	True	NM_153747,NM_002642,NM_139240	chr1,chr1,chr1	-,-,+	PIGC,PIGC,C1orf105	139,139,-23114
chr3:183737658-183738474	chr3	+	183737845	183738075	True	NM_182537,NM_001023587,NM_005688	chr3,chr3,chr3	+,-,-	HTR3D,ABCC5,ABCC5	11256,-2118,-2118
chr5:9900008-9900823	chr5	+	9900091	9900701	True	NR_027112,NM_012073	chr5,chr5	-,+	LOC285692,CCT5	3299,349580
chr7:100887197-100887559	chr7	+	100887274	100887494	True	NM_016068,NM_006349,NM_014343,NM_001185080	chr7,chr7,chr7,chr7	-,+,-,-	FIS1,ZNHIT1,CLDN15,CLDN15	927,-26340,-6047,-5173
chr18:74728559-74729062	chr18	+	74728645	74729045	True	NM_007345,NM_002385,NM_001025081,NM_001025090,NM_001025092	chr18,chr18,chr18,chr18,chr18	+,-,-,-,-	ZNF236,MBP,MBP,MBP,MBP	-192580,60,60,60,60
chr19:49990951-49991265	chr19	+	49990963	49991251	True	NR_001285,NR_026712,NR_000020,NR_000021,NM_012423,NR_000019,NR_000018,NM_001015,NR_029703	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,+,+,+,-	SNORD35B,RPL13AP5,SNORD33,SNORD32A,RPL13A,SNORD34,SNORD35A,RPS11,MIR150	9724,-149,2622,1971,-149,2912,3180,8382,12924
chr19:19312817-19313291	chr19	+	19312845	19313217	True	NM_176880,NM_001145784,NM_005919,NM_003721,NM_001145783,NM_004386,NM_134440,NR_027307,NR_027308	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,+,-,+,+,-,-	NR2C2AP,LOC729991,LOC729991-MEF2B,RFXANK,LOC729991,NCAN,RFXANK,LOC729991-MEF2B,LOC729991-MEF2B	1071,-9445,-9445,-9888,-9445,9564,-9888,-9445,-9445
chr20:48805957-48806628	chr20	+	48806030	48806522	True	NR_027889,NM_005194	chr20,chr20	-,+	TMEM189,CEBPB	-35695,853
chr2:68880828-68882293	chr2	+	68880835	68882158	True	NM_001024680,NM_138964	chr2,chr2	-,+	FBXO48,PROKR1	-186445,-7932
chr8:36743991-36745083	chr8	+	36744048	36745120	True	NM_001031836,NR_003671	chr8,chr8	+,-	KCNU1,LOC728024	-102262,860494
chr17:14138763-14139185	chr17	+	14138788	14139144	True	NM_001007530,NM_006041	chr17,chr17	-,+	CDRT15,HS3ST3B1	1056,65361
chr17:14138763-14139185	chr17	-	13928836	13928966	False	NR_003261,NM_001007530	chr17,chr17	+,-	CDRT15P,CDRT15	-1072,211241
chr19:33683196-33684931	chr19	+	33683351	33684816	True	NM_002333,NM_019849	chr19,chr19	+,-	LRP3,SLC7A10	782,31990
chr2:121005832-121006159	chr2	+	121005836	121006140	True	NM_002881,NR_000034	chr2,chr2	+,-	RALB,TMEM185B	4273,-24852
chr3:129326325-129326628	chr3	+	129326387	129326659	True	NM_153833,NM_015103	chr3,chr3	+,-	H1FOO,PLXND1	-64381,-805
chr6:14854659-14855297	chr6	+	14854783	14855271	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	391255,808068
chr2:61989126-61990500	chr2	+	61989250	61990451	True	NM_001201543,NM_152516	chr2,chr2	-,+	FAM161A,COMMD1	90882,142351
chr1:28970086-28970417	chr1	+	28970086	28970296	True	NM_001135218,NM_005644,NR_004407	chr1,chr1,chr1	-,-,+	TAF12,TAF12,RNU11	-482,-482,4815
chr10:76995006-76995256	chr10	+	76995025	76995185	True	NM_144589,NR_033675	chr10,chr10	-,+	COMTD1,VDAC2	635,-24776
chr21:46131535-46131740	chr21	+	46131685	46131781	True	NM_198699,NM_144991	chr21,chr21	+,-	KRTAP10-12,TSPEAR	-14649,-190
chr9:70339733-70340675	chr9	+	70340307	70340383	True	NM_201453,NM_001099279	chr9,chr9	+,-	CBWD3,FOXD4L2	516455,89398
chr9:70339733-70340675	chr9	-	42806239	42806315	False	NR_026759,NR_026558	chr9,chr9	-,+	FAM95B1,AQP7P3	227047,51836
chr9:70339733-70340675	chr9	+	70089558	70089838	False	NM_001126334,NR_024443	chr9,chr9	-,+	FOXD4L5,LOC100133920	89237,-438248
chr9:139637207-139637524	chr9	+	139637212	139637434	True	NM_198946,NR_033913,NM_001001712	chr9,chr9,chr9	-,+,-	LCN6,LOC100128593,LCN10	5596,3178,27
chr1:156030725-156031734	chr1	+	156030856	156031580	True	NM_020131,NM_014017,NM_001145264,NM_020387	chr1,chr1,chr1,chr1	-,+,+,+	UBQLN4,LAMTOR2,LAMTOR2,RAB25	-7340,-6390,-6390,59
chr9:96716439-96716716	chr9	+	96716441	96716715	True	NM_177995,NM_021570	chr9,chr9	+,-	PTPDC1,BARX1	76360,943
chr19:9540949-9541579	chr19	+	9541068	9541540	True	NM_198058,NM_006631,NM_001172651	chr19,chr19,chr19	-,-,+	ZNF266,ZNF266,ZNF177	4744,4744,-54127
chr16:2482124-2482510	chr16	+	2482262	2482552	True	NM_001761,NM_001089	chr16,chr16	+,-	CCNF,ABCA3	-2927,-91515
chr1:39869520-39871260	chr1	+	39870511	39871281	True	NR_003929,NM_015038	chr1,chr1	-,+	PPIEL,KIAA0754	154139,3894
chr12:15312680-15313959	chr12	+	15313171	15313714	True	NM_002848,NM_001190726	chr12,chr12	+,-	PTPRO,RERG	161772,60747
chr9:35910077-35910367	chr9	+	35910139	35910379	True	NR_024283,NM_001004487,NM_001039792	chr9,chr9,chr9	+,-,+	LOC158376,OR13J1,HRCT1	-710,-39741,-4001
chr12:54070012-54070295	chr12	+	54070069	54070237	True	NM_001002031,NM_005176,NM_134324	chr12,chr12,chr12	-,-,+	ATP5G2,ATP5G2,TARBP2	327,10,-174743
chr6:116990344-116990669	chr6	+	116990401	116990527	True	NM_145062,NM_002269	chr6,chr6	-,+	ZUFSP,KPNA5	-428,11839
chr19:51310019-51310921	chr19	+	51310067	51310909	True	NR_003067,NR_003069,NR_003068,NM_033068,NM_199249,NM_199250	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,+,-,-	SNORD88A,SNORD88C,SNORD88B,ACPT,C19orf48,C19orf48	-7275,-4389,-7685,-16459,-2093,-2095
chr16:8715981-8716416	chr16	+	8716070	8716452	True	NM_001146336,NM_024109	chr16,chr16	-,+	TMEM114,METTL22	-93844,-594
chr15:78383917-78385423	chr15	+	78383954	78385469	True	NM_001101404,NM_144572	chr15,chr15	+,-	SH2D7,TBC1D2B	-200,-13960
chr2:167276083-167277091	chr2	+	167276254	167277096	True	NM_001079810,NM_002977	chr2,chr2	+,-	XIRP2,SCN9A	467900,-43757
chr19:43770369-43772023	chr19	+	43770550	43772038	True	NR_026881,NM_002784	chr19,chr19	+,-	PRG1,PSG9	81169,1694
chr5:125925406-125925840	chr5	+	125925591	125925655	True	NM_001201377,NM_032177,NM_001202404,NM_001182	chr5,chr5,chr5,chr5	-,+,-,-	ALDH7A1,PHAX,ALDH7A1,ALDH7A1	5477,10951,5477,5477
chr19:47812935-47813906	chr19	+	47813351	47813753	True	NM_001736,NM_001127242	chr19,chr19	+,-	C5AR1,BBC3	-298,-77328
chr20:32842762-32843554	chr20	+	32842828	32842972	True	NM_001672,NM_000687	chr20,chr20	+,-	ASIP,AHCY	5198,48293
chr19:38145618-38145845	chr19	+	38145623	38145879	True	NM_001172226,NM_014898	chr19,chr19	+,-	ZNF540,ZFP30	-59943,484
chr11:60618465-60619595	chr11	+	60618776	60619478	True	NM_004778,NM_024098	chr11,chr11	-,+	GPR44,CCDC86	4016,-9398
chr19:22880650-22880903	chr19	+	22880655	22880926	True	NM_020855,NM_001080409	chr19,chr19	+,-	ZNF492,ZNF99	-63580,71917
chr8:124288448-124288752	chr8	+	124288480	124288553	True	NR_037874,NR_037873,NM_001204180,NM_007222,NM_207006,NM_001017926	chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,+,-	ZHX1,ZHX1,ZHX1-C8ORF76,ZHX1,FAM83A,ZHX1	-1753,-699,-1753,-1753,-93779,-1753
chr6:15025102-15025636	chr6	+	15025381	15025446	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	221080,637900
chr12:113375291-113376258	chr12	+	113375383	113376148	True	NM_001193521,NM_006187	chr12,chr12	-,+	RASAL1,OAS3	197461,100
chr1:42920533-42920838	chr1	+	42920622	42920872	True	NM_032257,NM_001077447,NM_001146192,NM_024664	chr1,chr1,chr1,chr1	-,+,-,+	ZMYND12,PPCS,ZMYND12,PPCS	1116,1300,1116,1300
chr6:79786122-79786759	chr6	+	79786155	79786741	True	NM_001010844,NM_017934	chr6,chr6	+,-	IRAK1BP1,PHIP	-209024,1320
chr3:50191636-50191982	chr3	+	50191730	50191858	True	NM_004186,NM_006764	chr3,chr3	+,-	SEMA3F,IFRD2	989,138218
chr14:74486633-74487252	chr14	+	74486640	74487198	True	NM_001249,NM_025057	chr14,chr14	-,+	ENTPD5,C14orf45	-614,-632
chr17:74722677-74722924	chr17	+	74722811	74722973	True	NM_001080510,NM_015167,NR_030366,NM_001081461	chr17,chr17,chr17,chr17	+,-,-,-	METTL23,JMJD6,MIR636,JMJD6	-16,-34,9707,-34
chr12:113796537-113796750	chr12	+	113796579	113796795	True	NM_001159727,NM_173542,NM_024959	chr12,chr12,chr12	+,+,-	PLBD2,PLBD2,SLC24A6	-259,-259,-23654
chr7:99008735-99009488	chr7	+	99008753	99009311	True	NM_003910,NM_014891	chr7,chr7	+,-	BUD31,PDAP1	-2205,-2448
chr7:36405712-36406262	chr7	+	36405724	36406303	True	NM_015314,NM_018685,NM_001199708,NM_001199707,NM_001199706	chr7,chr7,chr7,chr7,chr7	-,+,-,-,-	KIAA0895,ANLN,KIAA0895,KIAA0895,KIAA0895	604,23128,632,536,596
chr6:166794146-166795545	chr6	+	166794527	166795589	True	NM_016098,NR_027284	chr6,chr6	-,+	BRP44L,LOC441177	947,-393549
chr16:1525365-1525658	chr16	+	1525432	1525696	True	NM_001287,NM_001114331,NM_016111	chr16,chr16,chr16	-,-,+	CLCN7,CLCN7,TELO2	-347,-347,17655
chr17:39096136-39097737	chr17	+	39096310	39097548	True	NM_015515,NM_001195386	chr17,chr17	-,+	KRT23,TMEM99	-2474,-120936
chr17:73508953-73509380	chr17	+	73508997	73509187	True	NM_207346,NM_020753,NM_001142643	chr17,chr17,chr17	+,-,-	TSEN54,CASKIN2,CASKIN2	3421,2490,-3039
chrX:15489029-15490550	chrX	+	15489207	15490465	True	NR_037859,NM_203281	chrX,chrX	-,+	PIR-FIGF,BMX	19017,28434
chr8:144639191-144640222	chr8	+	144639209	144640049	True	NM_024736,NM_015117,NM_001166237,NM_001100878	chr8,chr8,chr8,chr8	+,-,+,-	GSDMD,ZC3H3,GSDMD,C8orf73	427,-15589,-3703,14929
chr17:62051823-62052265	chr17	+	62051846	62052256	True	NM_001164257,NM_000334	chr17,chr17	+,-	C17orf72,SCN4A	23454,-1568
chr7:130130886-130131141	chr7	+	130130927	130131097	True	NR_029899,NR_004382,NM_177525,NM_177524,NM_002402	chr7,chr7,chr7,chr7,chr7	+,-,+,+,+	MIR335,MESTIT1,MEST,MEST,MEST	4854,-34,75,-4940,840
chr1:85357868-85358519	chr1	+	85358026	85358468	True	NM_145172,NM_012152	chr1,chr1	+,-	WDR63,LPAR3	169524,478
chr16:28837020-28837586	chr16	+	28837019	28837602	True	NM_007245,NM_003321,NM_145714,NM_148416,NM_148415,NM_148414	chr16,chr16,chr16,chr16,chr16,chr16	+,-,+,+,+,+	ATXN2L,TUFM,ATXN2L,ATXN2L,ATXN2L,ATXN2L	-2660,20177,-2660,-2660,-2660,-2660
chrX:50024928-50026324	chrX	+	50024997	50026156	True	NM_003886,NM_033031,NM_033670	chrX,chrX,chrX	-,+,+	AKAP4,CCNB3,CCNB3	-59333,1383,1383
chr20:592352-592559	chr20	+	592365	592597	True	NM_004609,NM_031229	chr20,chr20	-,+	TCF15,RBCK1	-1455,-203707
chr1:938527-939038	chr1	+	938537	938947	True	NM_005101,NM_021170,NM_001142467	chr1,chr1,chr1	+,-,-	ISG15,HES4,HES4	9899,-2985,-2985
chr9:91000865-91001784	chr9	+	91001316	91001652	True	NM_006717,NM_001166137	chr9,chr9	+,-	SPIN1,FAM75C2	1644,-251416
chr13:46187994-46188526	chr13	+	46188078	46188562	True	NM_182542,NM_152719	chr13,chr13	-,+	FAM194B,SPERT	1362,87883
chr7:76110371-76110907	chr7	+	76110375	76110891	True	NR_003262,NM_001102596	chr7,chr7	-,+	FDPSL2A,DTX2	-6058,-599
chr7:76110371-76110907	chr7	+	76608474	76609003	False	NR_023383,NM_006682	chr7,chr7	+,-	PMS2P11,FGL2	1135,220197
chr16:89236385-89236838	chr16	+	89236517	89236837	True	NM_004933,NM_005187	chr16,chr16	+,-	CDH15,CBFA2T3	1325,-193013
chr3:32724581-32725199	chr3	+	32724595	32725059	True	NM_016141,NM_015442	chr3,chr3	-,+	DYNC1LI1,CNOT10	-112229,1638
chr20:21281955-21282490	chr20	+	21282099	21282294	True	NM_012255,NM_033176	chr20,chr20	+,-	XRN2,NKX2-4	1647,95810
chr8:22457512-22457901	chr8	+	22457840	22457918	True	NM_001013842,NM_173686,NR_027715,NM_021174,NR_033902,NM_001198827	chr8,chr8,chr8,chr8,chr8,chr8	+,+,-,+,+,+	C8orf58,C8orf58,FLJ14107,KIAA1967,KIAA1967,C8orf58	-784,-784,41854,4620,4226,-784
chr2:153189486-153190567	chr2	+	153189846	153190610	True	NM_052905,NM_005843	chr2,chr2	+,-	FMNL2,STAM2	1140,-157340
chr5:79611560-79612850	chr5	+	79611650	79612780	True	NM_032567,NR_004845	chr5,chr5	+,-	SPZ1,LOC644936	3009,-15353
chr7:4817561-4818159	chr7	+	4817884	4817982	True	NM_020144,NM_014855	chr7,chr7	-,+	PAPOLB,KIAA0415	83693,-2682
chr15:59692960-59694830	chr15	+	59693489	59694669	True	NM_152450,NM_004998	chr15,chr15	+,-	FAM81A,MYO1E	35702,-28418
chr18:12255683-12256204	chr18	+	12255758	12256139	True	NR_036468,NM_006796,NM_001279	chr18,chr18,chr18	+,-,+	CIDEA,AFG3L2,CIDEA	-1450,121193,-1492
chr6:142953773-142955705	chr6	+	142954024	142955722	True	NR_027311,NR_027312,NM_198569	chr6,chr6,chr6	-,-,+	LOC153910,LOC153910,GPR126	3309,3362,-331019
chr4:100360129-100361290	chr4	+	100360204	100361300	True	NM_000673,NM_001166504,NM_032149	chr4,chr4,chr4	-,-,+	ADH7,ADH7,C4orf17	-3537,-3913,70860
chr1:212525524-212527246	chr1	+	212525690	212526803	True	NR_004389,NM_001198862	chr1,chr1	+,-	SNORA16B,TMEM206	-124,61490
chr2:138720645-138722117	chr2	+	138721033	138722152	True	NM_007226,NM_001024074,NM_001024075,NM_006895	chr2,chr2,chr2,chr2	-,+,+,+	NXPH2,HNMT,HNMT,HNMT	815709,96,96,96
chr18:61615805-61616388	chr18	+	61615867	61616401	True	NM_001123366,NR_027245	chr18,chr18	+,-	HMSD,C18orf20	186,199909
chr4:110793397-110794057	chr4	+	110793430	110794106	True	NM_000204,NM_198506	chr4,chr4	-,+	CFI,LRIT3	-70095,-21002
chr3:51573252-51573511	chr3	+	51573404	51573466	True	NM_015106,NM_014703	chr3,chr3	+,-	RAD54L2,VPRBP	2129,-39386
chr7:43945170-43945582	chr7	+	43945206	43945304	True	NM_017920,NM_001204871,NM_001077663,NM_015983	chr7,chr7,chr7,chr7	-,-,-,+	URGCP,URGCP-MRPS24,URGCP,UBE2D4	977,977,977,20730
chr11:74865061-74866661	chr11	+	74865267	74866243	True	NM_001005285,NM_001145212,NM_007256,NM_001145211	chr11,chr11,chr11,chr11	-,+,+,+	OR2AT4,SLCO2B1,SLCO2B1,SLCO2B1	-64509,-3287,-3287,4600
chr1:161719057-161719538	chr1	+	161719228	161719578	True	NM_007240,NR_002595	chr1,chr1	+,-	DUSP12,RPL31P11	2,-64186
chr17:49235656-49236709	chr17	+	49235854	49236411	True	NM_001198682,NM_002512,NM_003971,NM_001018136,NM_001018137,NR_037149,NM_000269,NM_198175,NM_001018138,NM_001018139	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,-,+,+,+,+,+,+,+	NME2,NME2,SPAG9,NME1-NME2,NME2,NME1-NME2,NME1,NME1,NME2,NME2	7221,7221,-37628,-5008,6384,-5008,-4985,-4985,7671,7450
chr19:48430833-48431686	chr19	+	48431224	48431321	True	NR_024219,NR_024220,NR_024223,NR_024224,NR_024225,NR_024226,NR_024227,NR_024228,NR_024229,NR_024215,NR_024214,NR_024217,NM_003167,NR_004436,NR_004435,NR_024242	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,+,+,+,+,+,+,+,-,+,+,+	SNAR-C5,SNAR-C1,SNAR-A5,SNAR-A7,SNAR-A11,SNAR-A9,SNAR-A6,SNAR-A8,SNAR-A10,SNAR-A4,SNAR-A3,SNAR-C2,SULT2A1,SNAR-A2,SNAR-A1,SNAR-A14	753,753,-4242,-4242,-4242,-4242,-4242,-4242,-4242,-4242,-4242,753,-41570,6116,6116,-4242
chr19:48430833-48431686	chr19	+	48415456	48415553	False	NR_024219,NR_024220,NR_024217,NR_024216,NM_003167,NR_004437,NR_004436,NR_004435	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,-,+,+,+	SNAR-C5,SNAR-C1,SNAR-C2,SNAR-A13,SULT2A1,SNAR-A12,SNAR-A2,SNAR-A1	754,754,754,-4575,-25802,-4575,6132,6132
chr19:48430833-48431686	chr19	+	48441937	48442034	False	NR_024219,NR_024218,NR_024217,NR_024216,NR_024220,NM_003167,NR_004437,NR_004436,NR_004435	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,-,+,+,+	SNAR-C5,SNAR-C4,SNAR-C2,SNAR-A13,SNAR-C1,SULT2A1,SNAR-A12,SNAR-A2,SNAR-A1	-9916,763,-9916,6144,-9916,-52283,6144,-4553,-4553
chr19:48430833-48431686	chr19	+	48452694	48452753	False	NR_024219,NR_024221,NR_024218,NR_024217,NR_024216,NR_024220,NR_004437,NM_001128326	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,+,+,-	SNAR-C5,SNAR-C3,SNAR-C4,SNAR-C2,SNAR-A13,SNAR-C1,SNAR-A12,BSPH1	6185,799,-9950,6185,-4569,6185,-4569,42725
chr19:48430833-48431686	chr19	+	48458082	48458179	False	NR_024219,NR_024220,NR_024221,NR_024217,NR_024216,NR_004437,NM_001128326	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,+,-	SNAR-C5,SNAR-C1,SNAR-C3,SNAR-C2,SNAR-A13,SNAR-A12,BSPH1	759,759,-4583,759,-9957,-9957,37300
chr9:20623610-20624721	chr9	+	20623644	20624751	True	NM_004529,NM_017794	chr9,chr9	-,+	MLLT3,KIAA1797	-1130,33557
chr6:153044031-153045274	chr6	+	153044230	153045115	True	NM_025107,NM_182961	chr6,chr6	+,-	MYCT1,SYNE1	-25260,-85696
chr4:87306851-87308318	chr4	+	87307000	87308096	True	NM_138982,NM_006264	chr4,chr4	-,+	MAPK10,PTPN13	-25625,207371
chr19:10400453-10400745	chr19	+	10400477	10400768	True	NM_022377,NM_001544,NM_001039132,NM_003259,NM_001103167	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	ICAM4,ICAM4,ICAM4,ICAM5,ZGLP1	-2878,-2878,-2878,-52,19515
chr16:11879634-11880049	chr16	+	11879812	11880065	True	NM_003498,NM_014153	chr16,chr16	+,-	SNN,ZC3H7A	-117587,11099
chr19:8406534-8407334	chr19	+	8406686	8407354	True	NM_001031,NM_198471	chr19,chr19	+,-	RPS28,KANK3	-20359,842
chr8:103936625-103937372	chr8	+	103936779	103937391	True	NM_148174,NM_001695	chr8,chr8	-,+	AZIN1,ATP6V1C1	-60382,95856
chr5:176872946-176873494	chr5	+	176873081	176873509	True	NM_030567,NM_001174102,NM_080881,NM_001174101	chr5,chr5,chr5,chr5	+,+,-,+	PRR7,PRR7,DBN1,PRR7	286,1816,26412,286
chr6:142623600-142623848	chr6	+	142623623	142623823	True	NM_198569,NM_020455,NM_002511,NM_001032394,NM_001032395	chr6,chr6,chr6,chr6,chr6	+,+,-,+,+	GPR126,GPR126,NMBR,GPR126,GPR126	-618,-618,-213687,-618,-618
chr16:28507449-28507804	chr16	+	28507493	28507841	True	NM_001042432,NM_018690,NM_000086	chr16,chr16,chr16	-,+,-	CLN3,APOBR,CLN3	-3870,-1551,-4090
chr9:99180968-99181187	chr9	+	99181089	99181149	True	NM_153695,NM_014282	chr9,chr9	-,+	ZNF367,HABP4	-420,31264
chr11:2720409-2720686	chr11	+	2720409	2720709	True	NR_024627,NR_002728	chr11,chr11	+,-	KCNQ1DN,KCNQ1OT1	170553,569
chr17:75316419-75316930	chr17	+	75316549	75316922	True	NM_006640,NR_036200	chr17,chr17	+,-	SEPT9,MIR4316	-1003,76265
chr17:46704211-46704594	chr17	+	46704431	46704623	True	NM_024017,NR_033205,NR_029582	chr17,chr17,chr17	-,+,-	HOXB9,LOC404266,MIR196A1	-596,-31162,5348
chr1:12774342-12775833	chr1	+	12774667	12775881	True	NM_004753,NM_001103169,NM_001103170	chr1,chr1,chr1	-,+,+	DHRS3,AADACL3,AADACL3	-96847,236,236
chr14:23426454-23426702	chr14	+	23426555	23426623	True	NM_017815,NM_173527,NM_001166269,NM_001166270	chr14,chr14,chr14,chr14	-,+,-,-	HAUS4,REM2,HAUS4,HAUS4	-204,-74174,-204,-204
chr11:67273407-67274166	chr11	+	67273609	67274207	True	NM_003977,NM_005851,NM_004910,NM_001130848	chr11,chr11,chr11,chr11	+,-,-,-	AIP,CDK2AP2,PITPNM1,PITPNM1	-23155,1945,-766,-766
chr9:72288254-72288700	chr9	+	72288356	72288749	True	NM_001163,NM_001010940	chr9,chr9	-,+	APBA1,C9orf135	-1081,146981
chr1:158321016-158321897	chr1	+	158321326	158321540	True	NM_001764,NM_001185108,NM_001185107,NM_001185113,NM_001185112,NM_001185115,NM_001185110,NM_001185114,NM_001042583,NM_001042584,NM_001042585,NM_001042586,NM_001042587,NM_030893	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,+,+,+,+,+,+,+,+,+,+,+	CD1B,CD1E,CD1E,CD1E,CD1E,CD1E,CD1E,CD1E,CD1E,CD1E,CD1E,CD1E,CD1E,CD1E	-20005,1945,1945,1945,1945,1945,1945,1945,1945,1945,1945,1945,1945,1945
chrX:10122409-10123035	chrX	+	10122576	10123048	True	NM_001830,NM_000273	chrX,chrX	+,-	CLCN4,GPR143	1936,-388571
chr17:60212867-60214518	chr17	+	60212988	60214548	True	NM_001144933,NM_005121	chr17,chr17	+,-	EFCAB3,MED13	233030,-70345
chr16:18998420-19000091	chr16	+	18999159	19000063	True	NM_015092,NM_024847,NM_001160364	chr16,chr16,chr16	-,+,+	SMG1,TMC7,TMC7	-61433,-3954,-3601
chr3:138741652-138742710	chr3	+	138741862	138742445	True	NM_001040061,NM_001013650	chr3,chr3	+,-	C3orf72,PRR23B	-75844,-2094
chr2:174674309-174674622	chr2	+	174674350	174674446	True	NM_145810,NM_001017371	chr2,chr2	+,-	CDCA7,SP3	-454849,154557
chr12:12846203-12846758	chr12	+	12846207	12846662	True	NM_004064,NM_006143	chr12,chr12	+,-	CDKN1B,GPR19	23639,2510
chr7:27205189-27205789	chr7	+	27205225	27205779	True	NM_152739,NR_029911,NM_006896,NR_002795,NM_018951	chr7,chr7,chr7,chr7,chr7	-,-,-,+,-	HOXA9,MIR196B,HOXA7,HOXA11-AS1,HOXA10	-76,3453,-8929,19247,8226
chr4:128887112-128887894	chr4	+	128887203	128887747	True	NM_001039717,NM_152778	chr4,chr4	+,-	C4orf29,MFSD8	-793,-64
chr11:66103722-66104466	chr11	+	66103770	66104396	True	NM_001024957,NM_015399,NM_004292,NM_153266	chr11,chr11,chr11,chr11	-,-,-,+	BRMS1,BRMS1,RIN1,TMEM151A	8236,8236,60,-44448
chr2:240985074-240985850	chr2	+	240985177	240985839	True	NR_037808,NM_173351,NM_001080835	chr2,chr2,chr2	+,-,-	LOC150935,OR6B3,PRR21	-300674,-174,-2778
chr2:240985074-240985850	chr2	+	240969534	240969584	False	NM_001005853,NR_037808,NM_004544	chr2,chr2,chr2	-,+,-	OR6B2,LOC150935,NDUFA10	312,-285031,-4715
chr3:145873424-145873954	chr3	+	145873685	145873970	True	NM_182943,NM_000935,NM_003412	chr3,chr3,chr3	-,-,+	PLOD2,PLOD2,ZIC1	5367,5367,1253210
chr6:167707778-167708218	chr6	+	167707781	167708189	True	NM_004610,NM_018974,NM_001143947	chr6,chr6,chr6	-,+,+	TCP10,UNC93A,UNC93A	89859,-3030,-3030
chr13:60989439-60989862	chr13	+	60989522	60989888	True	NM_001042517,NM_001146070	chr13,chr13	-,+	DIAPH3,TDRD3	-251403,-18157
chr17:40265540-40265749	chr17	+	40265599	40265747	True	NM_024119,NM_021078,NM_033194	chr17,chr17,chr17	-,-,+	DHX58,KAT2A,HSPB9	-848,7685,9008
chr7:145610945-145612170	chr7	+	145611108	145611890	True	NM_014141,NM_022445	chr7,chr7	+,-	CNTNAP2,TPK1	201562,-1077962
chr22:20307122-20307348	chr22	+	20307158	20307334	True	NR_026919,NM_033257	chr22,chr22	+,-	LOC150197,DGCR6L	-113354,344
chr22:20307122-20307348	chr22	-	18894111	18894227	False	NM_001195226,NM_005675	chr22,chr22	-,+	PRODH,DGCR6	29787,-426
chr1:71513245-71513450	chr1	+	71513398	71513496	True	NR_028294,NR_028293,NR_028292,NM_001126044,NM_153742,NM_198719,NM_198718,NM_198715,NM_198714,NM_198717,NM_198716	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,+,-,-,-,-,-,-	PTGER3,PTGER3,PTGER3,PTGER3,CTH,PTGER3,PTGER3,PTGER3,PTGER3,PTGER3,PTGER3	45,45,45,45,-636548,45,45,45,45,45,45
chrX:128701325-128701929	chrX	+	128701329	128701861	True	NM_139035,NM_001587	chrX,chrX	-,+	SMARCA1,OCRL	-43869,-27134
chr20:36928415-36930294	chr20	+	36928582	36929834	True	NM_001725,NM_001029864	chr20,chr20	+,-	BPI,KIAA1755	2717,-39408
chr19:38084526-38085203	chr19	+	38084626	38085190	True	NM_001172225,NM_001172226,NM_016536	chr19,chr19,chr19	+,+,-	ZNF540,ZNF540,ZNF571	540,540,533
chr4:118496668-118497252	chr7	+	33059312	33060917	False	NM_001166118,NM_007270	chr7,chr7	-,+	NT5C3,FKBP9	21209,-63913
chr4:118496668-118497252	chr7	+	33063687	33066452	False	NM_001166118,NM_007270	chr7,chr7	-,+	NT5C3,FKBP9	16834,-69448
chr4:118496668-118497252	chr4	+	118496683	118497132	True	NM_152402,NM_004784	chr4,chr4	-,+	TRAM1L1,NDST3	-489947,458367
chr11:3694997-3695988	chr11	+	3695088	3696009	True	NM_004314,NM_020402	chr11,chr11	+,-	ART1,CHRNA10	-28791,-2474
chr10:119130072-119131106	chr10	+	119130216	119131089	True	NM_173791,NM_003054	chr10,chr10	-,+	PDZD8,SLC18A2	3899,-129687
chr17:1462937-1463587	chr17	+	1462942	1463568	True	NM_006224,NR_028514	chr17,chr17	-,+	PITPNA,LOC100306951	2592,-42780
chr18:44131766-44132499	chr18	+	44131848	44132529	True	NM_152470,NM_001145472	chr18,chr18	+,-	RNF165,LOXHD1	-217712,6791
chr4:163038587-163039248	chr4	+	163038645	163039290	True	NM_006174,NM_001128427	chr4,chr4	+,-	NPY5R,FSTL5	1225800,45946
chr12:57914003-57914387	chr12	+	57914151	57914329	True	NM_001195055,NM_052897,NM_001195053,NM_004083,NM_001195054,NM_001195057,NM_001195056	chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,+,-,-,-,-,-	DDIT3,MBD6,DDIT3,DDIT3,DDIT3,DDIT3,DDIT3	21,2329,21,21,21,21,21
chr17:79137934-79138351	chr17	+	79137945	79138348	True	NR_027255,NM_001080395	chr17,chr17	+,-	LOC388428,AATK	958,1575
chr17:30677596-30679108	chr17	+	30677662	30678817	True	NM_001098507,NM_022344,NM_003457,NM_001032293,NR_030362	chr17,chr17,chr17,chr17,chr17	+,-,+,+,+	ZNF207,C17orf75,ZNF207,ZNF207,MIR632	-562,-8473,-562,-562,-591
chr4:146537390-146538468	chr4	+	146537472	146538304	True	NM_178835,NM_172250	chr4,chr4	-,+	ZNF827,MMAA	321363,2235
chr13:102063992-102064859	chr13	+	102063998	102064897	True	NM_052867,NM_004791	chr13,chr13	-,+	NALCN,ITGBL1	3966,40068
chr21:37915017-37915352	chr21	+	37915067	37915315	True	NM_009586,NM_001146078	chr21,chr21	+,-	SIM2,CLDN14	156675,-169
chr19:10958208-10959155	chr19	+	10958368	10959201	True	NM_001136482,NM_006858	chr19,chr19	+,-	C19orf38,TMED1	8,-11385
chr17:48622417-48623675	chr17	+	48622560	48623714	True	NM_022827,NM_001267	chr17,chr17	+,-	SPATA20,CHAD	847,-76333
chr9:126035145-126036506	chr9	+	126036302	126036544	True	NM_173689,NM_001171137,NM_018387,NR_033234	chr9,chr9,chr9,chr9	+,-,-,-	CRB2,STRBP,STRBP,STRBP	81903,-5447,-5459,-5459
chr6:20542184-20543549	chr6	+	20542184	20543589	True	NM_017774,NM_001080480	chr6,chr6	+,-	CDKAL1,MBOAT1	-7549,-329514
chr11:26385961-26387713	chr11	+	26386183	26387424	True	NM_031418,NM_001135091	chr11,chr11	+,-	ANO3,MUC15	-32557,206448
chr1:249140214-249141102	chr1	+	249140236	249141065	True	NM_024836,NM_001136036	chr1,chr1	+,-	ZNF672,ZNF692	-7768,12110
chr8:95272058-95273452	chr8	+	95272222	95273489	True	NM_005261,NM_181702,NM_001161778	chr8,chr8,chr8	-,-,+	GEM,GEM,PDP1	1108,1108,-342281
chr10:70478886-70480128	chr10	+	70479019	70479734	True	NM_018237,NM_152707	chr10,chr10	+,-	CCAR1,SLC25A16	1236,-191739
chr11:76434367-76435408	chr11	+	76434517	76435299	True	NM_015516,NR_024042	chr11,chr11	+,-	TSKU,GUCY2E	58985,-1684
chr19:2015240-2015452	chr19	+	2015328	2015408	True	NM_001319,NM_017797	chr19,chr19	+,-	CSNK1G2,BTBD2	-74218,344
chr4:144479235-144480290	chr4	+	144479472	144480123	True	NM_001168235,NR_003675	chr4,chr4	-,+	FREM3,LOC441046	141756,501
chr20:61298154-61298397	chr20	+	61298181	61298375	True	NM_016354,NR_024470	chr20,chr20	+,-	SLCO4A1,LOC100127888	-24435,-208
chr9:130679973-130681040	chr9	+	130679979	130681039	True	NM_175039,NM_001018078,NM_173492,NM_175040	chr9,chr9,chr9,chr9	-,+,-,-	ST6GALNAC4,FPGS,PIP5KL1,ST6GALNAC4	-674,-114522,8781,-674
chr2:107151150-107151436	chr2	+	107151150	107151246	True	NM_001144013,NR_003506	chr2,chr2	-,+	RGPD3,PLGLA	-66349,-148432
chr1:46690046-46690289	chr1	+	46690054	46690188	True	NM_001013615,NR_024332	chr1,chr1	+,-	C1orf190,POMGNT1	-21099,-4077
chr16:32898018-32898835	chr16	+	32898231	32898649	True	NR_003083,NM_016212	chr16,chr16	-,+	SLC6A10P,TP53TG3	-1768,306330
chr16:32898018-32898835	chr16	-	33776678	33777096	False	NR_033866,NM_001205265	chr16,chr16	-,+	LOC390705,TP53TG3B	-477976,-514609
chr14:100625135-100625350	chr14	+	100625176	100625356	True	NM_003403,NM_206918	chr14,chr14	+,-	YY1,DEGS2	79745,706
chr11:61594614-61594963	chr11	+	61594673	61594965	True	NM_013402,NM_004265	chr11,chr11	-,+	FADS1,FADS2	-10144,747
chr14:41107528-41107729	chr14	+	41107531	41107759	True	NM_152447,NM_203301	chr14,chr14	+,-	LRFN5,FBXO33	969004,-1205827
chr3:63505809-63506070	chr3	+	63505809	63506023	True	NM_025075,NM_144642	chr3,chr3	-,+	THOC7,SYNPR	343624,-77107
chr5:70882436-70882979	chr5	+	70882481	70882936	True	NM_022132,NR_033968	chr5,chr5	+,-	MCCC2,LOC100049076	178,-327359
chr6:134366622-134367803	chr6	+	134366830	134367678	True	NM_004865,NM_145176	chr6,chr6	+,-	TBPL1,SLC2A12	-92581,6168
chr13:99740094-99740586	chr13	+	99740102	99740524	True	NM_001130049,NM_015296,NM_001144072	chr13,chr13,chr13	-,-,+	DOCK9,DOCK9,UBAC2	-1442,-1442,112154
chr8:134581460-134581907	chr8	+	134581472	134581902	True	NM_003033,NR_037944,NM_173344	chr8,chr8,chr8	-,+,-	ST3GAL1,WISP1,ST3GAL1	2331,-378242,2331
chr1:168699847-168701159	chr1	+	168700149	168701165	True	NR_024160,NM_001937	chr1,chr1	+,-	MGC4473,DPT	55013,-1707
chr5:78004848-78005778	chr5	+	78004847	78005487	True	NM_004866,NM_005779	chr5,chr5	+,-	SCAMP1,LHFPL2	-348567,-60199
chr6:110468471-110469156	chr6	+	110468589	110468952	True	NM_001024934,NM_015891	chr6,chr6	-,+	WASF1,CDC40	32314,32671
chr16:79809037-79809558	chr16	+	79809040	79809584	True	NM_005360,NM_130897	chr16,chr16	-,+	MAF,DYNLRB2	-174418,765269
chr3:160820880-160821606	chr3	+	160821072	160821511	True	NM_001038628,NM_033168,NM_033169,NM_033167,NM_003781,NM_015938	chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,-,+	B3GALNT1,B3GALNT1,B3GALNT1,B3GALNT1,B3GALNT1,NMD3	1710,1710,1233,1710,1710,117587
chr7:5464356-5464632	chr7	+	5464458	5464562	True	NM_001080495,NM_153247	chr7,chr7	-,+	TNRC18,SLC29A4	-1281,-141948
chrX:70838962-70840571	chrX	+	70839176	70840542	True	NM_001142797,NM_052957,NM_001504	chrX,chrX,chrX	-,+,-	CXCR3,ACRC,CXCR3	-809,-41353,-809
chr19:46627153-46629005	chr19	+	46627164	46628908	True	NM_001002915,NM_207393	chr19,chr19	+,-	IGFL2,IGFL3	22130,-51
chr9:21994300-21994539	chr9	+	21994299	21994587	True	NM_058195,NR_003529	chr9,chr9	-,+	CDKN2A,CDKN2B-AS1	-41,202
chr1:36395080-36395846	chr1	+	36395104	36395887	True	NM_024852,NM_022111,NM_177422	chr1,chr1,chr1	+,-,+	EIF2C3,CLSPN,EIF2C3	795,-159553,795
chr12:48398596-48399167	chr12	+	48398617	48399109	True	NM_024056,NM_033150,NM_001844	chr12,chr12,chr12	+,-,-	TMEM106C,COL2A1,COL2A1	-41338,-332,-332
chr13:61988411-61989035	chr13	+	61988415	61989083	True	NM_022843,NM_001146070	chr13,chr13	-,+	PCDH20,TDRD3	622,-1017039
chr14:35878029-35879252	chr14	+	35878248	35878949	True	NM_002791,NM_020529	chr14,chr14	+,-	PSMA6,NFKBIA	-116732,-4288
chr18:56531316-56531626	chr18	+	56531587	56531675	True	NM_018181,NM_052947	chr18,chr18	+,-	ZNF532,ALPK2	-1577,-235398
chr16:85612443-85613069	chr16	+	85612634	85613083	True	NM_001134473,NM_016095	chr16,chr16	+,-	KIAA0182,GINS2	31945,109555
chr8:19455159-19455769	chr8	+	19455221	19455811	True	NM_001130518,NM_018142	chr8,chr8	-,+	CSGALNACT1,INTS10	4295,219106
chr2:178787340-178788562	chr2	+	178787452	178788617	True	NM_001077358,NM_152945	chr2,chr2	-,+	PDE11A,RBM45	4,188564
chr16:71844366-71845858	chr16	+	71844505	71845488	True	NM_001128,NM_001137675,NM_001030007	chr16,chr16,chr16	-,+,-	AP1G1,ATXN1L,AP1G1	-1529,34410,-1529
chr1:112002110-112002380	chr1	+	112002250	112002378	True	NM_001688,NM_024102	chr1,chr1	+,-	ATP5F1,WDR77	-10567,-10420
chr15:81291536-81291864	chr15	+	81291684	81291886	True	NM_022566,NM_015154	chr15,chr15	+,-	MESDC1,MESDC2	1408,-9479
chr17:42092182-42092392	chr17	+	42092244	42092332	True	NM_032376,NM_153006	chr17,chr17	-,+	TMEM101,NAGS	63,-10263
chr11:5535997-5537299	chr11	+	5536222	5537096	True	NM_001005163,NM_145053,NM_017481	chr11,chr11,chr11	+,-,-	OR52D1,UBQLNL,UBQLN3	-26359,910,-5069
chr9:127532555-127532906	chr9	+	127532687	127532783	True	NM_001489,NM_033334,NM_182487	chr9,chr9,chr9	-,-,+	NR6A1,NR6A1,OLFML2A	843,843,6653
chr9:100293228-100294029	chr9	+	100293383	100294059	True	NM_139246,NM_003275	chr9,chr9	-,+	TSTD2,TMOD1	101953,-29513
chr14:24804372-24804673	chr14	+	24804381	24804703	True	NM_139247,NM_181657,NM_001198592,NM_001198568,NM_006871	chr14,chr14,chr14,chr14,chr14	-,+,-,-,-	ADCY4,LTB4R,ADCY4,ADCY4,RIPK3	-104,-22119,-104,-104,4589
chr16:84003911-84004621	chr16	+	84004072	84004420	True	NM_001080442,NM_019065	chr16,chr16	-,+	SLC38A8,NECAB2	71392,-1886
chr7:7616882-7617112	chr7	+	7616916	7617128	True	NM_001037763,NM_019005	chr7,chr7	-,+	COL28A1,MIOS	-41456,-10353
chr5:75379477-75379705	chr5	+	75379483	75379743	True	NM_001099271,NM_014979	chr5,chr5	-,+	POC5,SV2C	-366170,-229
chr1:27667468-27668115	chr1	+	27667650	27668150	True	NM_032872,NM_001193308,NM_004672	chr1,chr1,chr1	+,+,-	SYTL1,SYTL1,MAP3K6	332,332,25237
chr19:11593659-11593888	chr19	+	11593791	11593937	True	NM_032281,NM_001420,NM_002743	chr19,chr19,chr19	-,-,+	ELAVL3,ELAVL3,PRKCSH	-1988,-1988,-47573
chr11:49582481-49583247	chr11	+	49582617	49583277	True	NR_027044,NM_004476	chr11,chr11	+,-	LOC440040,FOLH1	-2588,-352395
chr11:49582481-49583247	chr11	-	88796362	88796522	False	NM_000842,NM_000372	chr11,chr11	-,+	GRM5,TYR	350,114517
chr8:95898649-95899453	chr8	+	95899015	95899442	True	NM_057749,NM_017864	chr8,chr8	-,+	CCNE2,INTS8	8098,-63545
chr10:33625360-33625584	chr10	+	33625501	33625577	True	NM_001024629,NM_001024628,NM_024688,NM_003873	chr10,chr10,chr10,chr10	-,-,+,-	NRP1,NRP1,C10orf68,NRP1	-1668,-1668,-768901,-1668
chr11:71703019-71704977	chr11	+	71703308	71704738	True	NM_001145055,NM_001145057,NM_001039660,NM_001039659,NR_029192,NM_005699,NM_173042,NM_173044	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,-,+,+,+	IL18BP,IL18BP,IL18BP,IL18BP,LOC100133315,IL18BP,IL18BP,IL18BP	6234,5924,5219,5219,-63815,5370,5370,5219
chr3:148703962-148704401	chr3	+	148704072	148704358	True	NM_001184721,NM_001184720,NM_004130,NM_003071	chr3,chr3,chr3,chr3	+,+,+,-	GYG1,GYG1,GYG1,HLTF	4836,4836,4836,100033
chr3:148703962-148704401	chr1	+	156011747	156012647	False	NM_020131,NM_014017	chr1,chr1	-,+	UBQLN4,LAMTOR2	10919,11869
chr6:15966378-15966669	chr6	+	15966414	15966700	True	NM_013262,NR_036448	chr6,chr6	+,-	MYLIP,DTNBP1	162616,-303125
chr20:23545936-23547242	chr20	+	23546042	23547156	True	NM_080610,NR_001279	chr20,chr20	-,+	CST9L,CSTT	2280,-46316
chr2:58689551-58690911	chr2	+	58690047	58690481	True	NR_033873,NM_018062	chr2,chr2	+,-	FLJ30838,FANCL	57406,-221532
chr16:1820206-1820644	chr16	+	1820254	1820667	True	NM_002513,NM_001010865,NM_023936	chr16,chr16,chr16	-,+,-	NME3,EME2,MRPS34	1093,2561,2523
chr12:10236365-10237343	chr12	+	10236761	10237030	True	NM_207345,NM_016511	chr12,chr12	+,-	CLEC9A,CLEC1A	-53536,14632
chr6:26057290-26058363	chr6	+	26057375	26058401	True	NM_005319,NM_003531	chr6,chr6	-,+	HIST1H1C,HIST1H3C	-676,-11788
chr5:60127667-60128488	chr5	+	60127666	60128151	True	NM_001104558,NM_174889	chr5,chr5	-,+	ELOVL7,NDUFAF2	12007,112804
chr1:59617256-59619162	chr1	+	59617289	59618543	True	NR_027120,NM_001113411	chr1,chr1	-,+	LOC729467,FGGY	-4810,144081
chr13:99737703-99737923	chr13	+	99737750	99737938	True	NM_001130049,NM_015296,NM_001144072	chr13,chr13,chr13	-,-,+	DOCK9,DOCK9,UBAC2	772,772,114740
chr19:56905678-56907502	chr19	+	56905777	56907001	True	NM_001159861,NM_001159860,NM_144690,NR_037161,NR_037160,NR_037159,NM_152478	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,-,+,+,+,+	ZNF583,ZNF583,ZNF582,LOC386758,LOC386758,LOC386758,ZNF583	8716,8381,-888,-791,-791,-791,8692
chr1:203698595-203698902	chr1	+	203698690	203698898	True	NR_027902,NR_003019	chr1,chr1	-,+	C1orf157,SNORA77	311544,-32
chr2:178977315-178977583	chr2	+	178977334	178977506	True	NM_001077197,NM_152945	chr2,chr2	-,+	PDE11A,RBM45	-4268,-203
chr4:178241913-178243805	chr4	+	178242000	178243830	True	NM_000027,NM_018248	chr4,chr4	-,+	AGA,NEIL3	119885,-11061
chrX:134955686-134956844	chrX	+	134955788	134956873	True	NM_001007551,NM_018666,NM_001172288	chrX,chrX,chrX	-,+,-	CT45A5,SAGE1,CT45A5	-1794,18911,-1794
chrX:134955686-134956844	chrX	+	134938533	134939618	False	NM_018666,NM_001017436	chrX,chrX	+,-	SAGE1,CT45A4	36166,-1798
chrX:134955686-134956844	chrX	-	134863329	134864415	False	NM_152582,NM_001017436	chrX,chrX	+,+	CT45A2,CT45A4	1798,1798
chrX:134955686-134956844	chrX	-	134880604	134881690	False	NM_001017436,NM_001017435	chrX,chrX	-,+	CT45A4,CT45A3	55102,1797
chr19:52643322-52643725	chr19	+	52643403	52643767	True	NM_014225,NM_178523	chr19,chr19	+,-	PPP2R1A,ZNF616	49287,-212
chr12:3002645-3003951	chr12	+	3002827	3003375	True	NM_202003,NM_001160408,NM_003324	chr12,chr12,chr12	-,+,+	FOXM1,TULP3,TULP3	-16524,-2850,-2850
chr17:74863775-74864395	chr17	+	74863875	74864199	True	NM_144677,NM_198955,NM_001199172,NR_036608	chr17,chr17,chr17,chr17	+,+,+,-	MGAT5B,MGAT5B,MGAT5B,SRSF2	598,4529,598,-130382
chr22:38202873-38203259	chr22	+	38202928	38203274	True	NM_138797,NM_014291,NM_005318,NM_001171690	chr22,chr22,chr22,chr22	-,+,+,+	ANKRD54,GCAT,H1F0,GCAT	37129,637,-1866,637
chr11:14993605-14994177	chr11	+	14993626	14994168	True	NM_000728,NM_001033953,NM_001033952,NM_001741	chr11,chr11,chr11,chr11	+,-,-,-	CALCB,CALCA,CALCA,CALCA	100977,-82,-82,-82
chr22:32024961-32025790	chr22	+	32025361	32025833	True	NM_001007188,NM_014338	chr22,chr22	+,-	DEPDC5,PISD	124235,1027
chr6:24638708-24639415	chr6	+	24639006	24639450	True	NM_001160094,NM_001168374,NM_001168375,NM_001168376,NM_014809,NM_001168377	chr6,chr6,chr6,chr6,chr6,chr6	+,-,-,-,-,-	ACOT13,KIAA0319,KIAA0319,KIAA0319,KIAA0319,KIAA0319	27812,6993,6859,6859,6993,6993
chr17:47654286-47654651	chr17	+	47654470	47654672	True	NM_001007226,NM_007225	chr17,chr17	-,+	SPOP,NXPH3	100903,-1223
chr1:26372111-26372336	chr1	+	26372163	26372371	True	NM_001004434,NM_032513,NM_004455	chr1,chr1,chr1	-,-,+	SLC30A2,SLC30A2,EXTL1	283,283,-23943
chr4:187643324-187644001	chr4	+	187643430	187644031	True	NM_000128,NM_005245	chr4,chr4	+,-	F11,FAT1	-456369,1007
chr17:78122955-78123300	chr17	+	78122962	78123050	True	NM_024110,NM_014740	chr17,chr17	+,-	CARD14,EIF4A3	29230,-1980
chr9:139438227-139438532	chr9	+	139438269	139438521	True	NM_017617,NM_152571	chr9,chr9	-,+	NOTCH1,C9orf163	1767,-60373
chr17:6679656-6680059	chr17	+	6679786	6680046	True	NM_053285,NM_153230	chr17,chr17	-,+	TEKT1,FBXO39	55064,-285
chr4:26321660-26322307	chr4	+	26321837	26322355	True	NM_203284,NM_015874,NM_203283,NM_005349,NM_000730	chr4,chr4,chr4,chr4,chr4	+,+,+,+,-	RBPJ,RBPJ,RBPJ,RBPJ,CCKAR	92,92,-556,-556,169737
chr13:52700838-52701974	chr13	+	52700940	52702018	True	NM_199289,NM_021645	chr13,chr13	-,+	NEK5,UTP14C	1252,-102164
chr1:244625428-244627382	chr1	+	244625676	244627409	True	NM_173807,NM_001126,NM_001130957	chr1,chr1,chr1	+,-,+	C1orf101,ADSS,C1orf101	-1061,-10240,-1061
chr3:96533187-96533422	chr3	+	96533245	96533469	True	NM_001042533,NM_001080448	chr3,chr3	-,+	MINA,EPHA6	1157805,-37
chr16:87903840-87904144	chr16	+	87903919	87904135	True	NM_001173539,NM_003486	chr16,chr16	+,-	BANP,SLC7A5	80902,-819
chr16:87903840-87904144	chr16	+	21532624	21532674	False	NM_001077180,NR_002594	chr16,chr16	+,-	METTL9,SLC7A5P2	78181,-859
chr16:87903840-87904144	chr16	+	29625892	29625942	False	NR_002593,NM_001030288	chr16,chr16	-,+	SLC7A5P1,SPN	-854,48357
chr12:55005630-55007322	chr12	+	55005827	55007199	True	NM_001165975,NR_003039	chr12,chr12	+,-	PDE1B,GLYCAM1	-50779,-1581
chrX:73598261-73599359	chrX	+	73598691	73599384	True	NM_006517,NR_028379	chrX,chrX	+,-	SLC16A2,MIR374AHG	41700,-85282
chrX:37553257-37553703	chrX	+	37553266	37553726	True	NM_021083,NM_006520	chrX,chrX	+,-	XK,DYNLT3	-8191,153213
chr7:87527184-87527960	chr7	+	87527390	87527808	True	NM_006716,NM_018843	chr7,chr7	+,-	DBF4,SLC25A40	-21910,-21698
chr2:220362590-220362817	chr2	+	220362764	220362862	True	NM_013335,NM_205847,NM_001195731	chr2,chr2,chr2	+,+,-	GMPPA,GMPPA,CHPF	724,754,45007
chr19:2786189-2786690	chr19	+	2786189	2786249	True	NM_003249,NM_003021	chr19,chr19	+,-	THOP1,SGTA	-734,-2835
chr1:156308909-156310108	chr1	+	156309163	156309954	True	NR_036564,NR_036565,NM_005998,NM_001008800,NM_144627	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	CCT3,CCT3,CCT3,CCT3,C1orf182	-957,-957,-957,-957,-2112
chr8:23339529-23340229	chr8	+	23339799	23340261	True	NM_016612,NM_001128930	chr8,chr8	+,-	SLC25A37,ENTPD4	46101,-24555
chr21:43825838-43826563	chr21	+	43825842	43826562	True	NM_018961,NM_024022,NM_032405,NM_001001895	chr21,chr21,chr21,chr21	+,-,-,+	UBASH3A,TMPRSS3,TMPRSS3,UBASH3A	-1874,-9642,-9642,-1874
chr17:39676170-39676417	chr17	+	39676216	39676466	True	NM_002276,NM_005801,NM_002275	chr17,chr17,chr17	-,+,-	KRT19,EIF1,KRT15	8225,168660,-946
chr2:74373413-74373712	chr2	+	74373426	74373744	True	NM_212552,NM_006636,NM_001035505	chr2,chr2,chr2	-,+,-	BOLA3,MTHFD2,BOLA3	1345,51945,1345
chr4:82387308-82388721	chr4	+	82387312	82388757	True	NM_152545,NM_001201	chr4,chr4	-,+	RASGEF1B,BMP3	4354,-435245
chr17:56245862-56247396	chr17	+	56246246	56247330	True	NM_017777,NM_001004707	chr17,chr17	-,+	MKS1,OR4D2	49386,-42
chr12:69006210-69006994	chr12	+	69006266	69006754	True	NM_015646,NM_001010942,NR_033335	chr12,chr12,chr12	+,+,-	RAP1B,RAP1B,SNORA70G	-1665,-1665,14459
chr2:210455150-210455958	chr2	+	210455381	210455888	True	NM_152519,NM_031847	chr2,chr2	-,+	C2orf67,MAP2	580219,-11038
chr3:149188061-149189516	chr3	+	149188110	149189554	True	NM_004617,NM_014220	chr3,chr3	+,-	TM4SF4,TM4SF1	2813,-92542
chr7:65861848-65862564	chr7	+	65861880	65862569	True	NR_026873,NM_003596	chr7,chr7	-,+	NCRNA00174,TPST1	2876,-191672
chr20:44717589-44717793	chr20	+	44717668	44717754	True	NM_020967,NM_001250	chr20,chr20	-,+	NCOA5,CD40	876,29151
chr3:182701386-182703136	chr3	+	182701538	182703026	True	NM_014616,NM_020640	chr3,chr3	+,-	ATP11B,DCUN1D1	-190308,-3212
chr1:9647713-9648099	chr1	+	9647844	9647925	True	NM_001130924,NR_027045,NM_001010866	chr1,chr1,chr1	+,-,+	TMEM201,C1orf200,TMEM201	1006,66778,1006
chr4:91051896-91052376	chr4	+	91052046	91052116	True	NM_001145065,NM_001146055	chr4,chr4	+,-	FAM190A,SNCA	-3413,-292599
chr3:118916755-118918128	chr3	+	118916826	118918059	True	NM_006952,NM_003778	chr3,chr3	+,-	UPK1B,B4GALT4	-24459,41743
chr12:53647299-53647636	chr12	+	53647363	53647685	True	NM_001170790,NM_032889,NM_000966	chr12,chr12,chr12	+,+,-	MFSD5,MFSD5,RARG	-2044,-1538,-21327
chr19:41812503-41813284	chr19	+	41812714	41813314	True	NM_052848,NM_000660	chr19,chr19	+,-	CCDC97,TGFB1	2779,46568
chr11:93257440-93258861	chr11	+	93257602	93258877	True	NM_033395,NM_020179	chr11,chr11	+,-	KIAA1731,C11orf75	135938,17719
chr19:55630291-55630666	chr19	+	55630323	55630705	True	NM_017607,NM_017729	chr19,chr19	-,+	PPP1R12C,EPS8L1	-1396,-38614
chr1:145113681-145114779	chr1	+	145114123	145114727	True	NM_004892,NM_022359	chr1,chr1	+,-	SEC22B,PDE4DIP	-17778,-37937
chr3:62358930-62359153	chr3	+	62358967	62359109	True	NM_018008,NM_020685	chr3,chr3	-,+	FEZF2,C3orf14	131,-53622
chr3:30907153-30908654	chr3	+	30907277	30908691	True	NM_207359,NM_003242	chr3,chr3	-,+	GADL1,TGFBR2	27512,-259335
chr17:30814670-30814944	chr17	+	30814685	30814931	True	NM_003885,NM_022344	chr17,chr17	+,-	CDK5R1,C17orf75	-631,-145496
chr10:37413364-37413674	chr10	+	37413453	37413581	True	NM_052997,NM_001190489	chr10,chr10	+,-	ANKRD30A,MTRNR2L7	1203,478328
chr8:94765921-94766962	chr8	+	94766184	94766982	True	NM_001142301,NR_024522,NM_203390,NM_153704	chr8,chr8,chr8,chr8	+,+,-,+	TMEM67,TMEM67,RBM12B,TMEM67	89,89,-12960,89
chr2:20851028-20851463	chr2	+	20851088	20851390	True	NM_022460,NM_182828	chr2,chr2	-,+	HS1BP3,GDF7	-224,15033
chr16:88803289-88803910	chr16	+	88803288	88803902	True	NM_178841,NM_001012762	chr16,chr16	-,+	RNF166,CTU2	-30459,-30448
chr11:61524116-61524665	chr11	+	61524295	61524528	True	NR_026882,NM_013279,NM_001127392	chr11,chr11,chr11	-,+,+	DKFZP434K028,C11orf9,C11orf9	661,-1485,-4225
chr8:8556967-8558911	chr8	+	8557111	8558778	True	NM_004225,NM_194284	chr8,chr8	-,+	MFHAS1,CLDN23	192405,887
chr6:74016400-74016873	chr6	+	74016760	74016885	True	NM_001017361,NR_027005	chr6,chr6	+,-	C6orf221,C6orf147	55514,3258
chr8:95275770-95276572	chr8	+	95275811	95276417	True	NM_005261,NM_181702,NM_001161778	chr8,chr8,chr8	-,-,+	GEM,GEM,PDP1	-1264,-1264,-345872
chr10:71072941-71073309	chr10	+	71072948	71073206	True	NM_033496,NM_001057,NM_000188	chr10,chr10,chr10	+,-,+	HK1,TACR2,HK1	2403,103524,5396
chr11:77533382-77533981	chr11	+	77533551	77533786	True	NM_016578,NM_024684	chr11,chr11	-,+	RSF1,C11orf67	-1671,-1400
chrX:155230278-155230735	chrY	+	59333335	59333785	False	NR_002179,NM_002186	chrY,chrY	-,+	TTTY17C,IL9R	-32002415,-3134
chrX:155230278-155230735	chrX	+	155230329	155230779	True	NM_002186,NM_018196	chrX,chrX	+,-	IL9R,TMLHE	-3134,-387707
chr5:156890397-156891521	chr5	+	156890485	156891419	True	NM_001099287,NM_033274,NM_001172292	chr5,chr5,chr5	+,-,+	NIPAL4,ADAM19,NIPAL4	-3509,111422,-3509
chr8:144490690-144490945	chr8	+	144490879	144490949	True	NM_201589,NM_052924	chr8,chr8	-,+	MAFA,RHPN1	21703,-39905
chr18:34509831-34511489	chr18	+	34509918	34511047	True	NM_020776,NM_015476	chr18,chr18	+,-	KIAA1328,C18orf10	-100889,-100760
chr6:117923416-117923934	chr6	+	117923578	117923976	True	NM_020399,NM_138459,NM_001017408	chr6,chr6,chr6	-,+,-	GOPC,NUS1,GOPC	11,72640,11
chr15:73756757-73758283	chr15	+	73756828	73757928	True	NM_001042367,NM_005477	chr15,chr15	+,-	C15orf60,HCN4	-21380,-95223
chr7:24321747-24323236	chr7	+	24321752	24323276	True	NM_001127453,NM_000905	chr7,chr7	-,+	DFNA5,NPY	473857,530
chr1:167204723-167205631	chr1	+	167204722	167205148	True	NR_037163,NM_005814	chr1,chr1	+,-	POU2F1,GPA33	-14651,-144854
chr19:4248159-4249236	chr19	+	4248235	4249049	True	NM_001169126,NM_018074	chr19,chr19	-,+	TMIGD2,CCDC94	53429,-1175
chr17:26217134-26219048	chr17	+	26217160	26218740	True	NM_001076680,NM_016231	chr17,chr17	-,+	C17orf108,NLK	1733,150947
chr16:79840376-79840851	chr16	+	79840600	79840880	True	NM_005360,NM_130897	chr16,chr16	-,+	MAF,DYNLRB2	-205978,733973
chr10:90711765-90712426	chr10	+	90711850	90712473	True	NM_001613,NM_000043	chr10,chr10	-,+	ACTA2,FAS	164,37814
chr2:232258361-232258610	chr2	+	232258390	232258532	True	NR_002921,NM_145236	chr2,chr2	-,+	SNORA75,B3GNT7	62165,1802
chr11:65728170-65728884	chr11	+	65728284	65728876	True	NM_032325,NM_005146	chr11,chr11	-,+	EIF1AD,SART1	40752,283
chr3:4794476-4795391	chr3	+	4794523	4795377	True	NR_004428,NM_003670	chr3,chr3	-,+	EGOT,BHLHE40	-1249,225719
chr17:60881658-60882341	chr17	+	60881661	60882307	True	NM_001100875,NM_152598,NR_036146	chr17,chr17,chr17	-,-,+	MARCH10,MARCH10,MIR548W	1754,3448,-82854
chr16:28932572-28933627	chr16	+	28932579	28933630	True	NM_024816,NM_001770,NM_001178098	chr16,chr16,chr16	-,+,+	RABEP2,CD19,CD19	2952,9629,9629
chr5:133512983-133513534	chr5	+	133513181	133513471	True	NM_006930,NR_037434,NM_170679	chr5,chr5,chr5	-,+,-	SKP1,MIR3661,SKP1	-457,47976,-457
chr8:59406278-59407414	chr8	+	59406649	59407419	True	NM_000780,NM_001007067	chr8,chr8	-,+	CYP7A1,SDCBP	5351,58308
chr14:58893738-58894281	chr14	+	58893757	58894207	True	NM_012460,NM_014749	chr14,chr14	-,+	TIMM9,KIAA0586	75,502
chrX:20135218-20135929	chrX	+	20135274	20135882	True	NM_152780,NM_001173456,NM_001168465,NM_001168466,NM_001168467	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	MAP7D2,PDHA1,MAP7D2,MAP7D2,MAP7D2	-160,-773314,-160,-160,-518
chr12:128060992-128061603	chr12	+	128061029	128061499	True	NR_033970,NR_033987	chr12,chr12	-,+	LOC440117,FLJ37505	-701793,304662
chr20:61200553-61200994	chr20	+	61200624	61201010	True	NR_033263,NR_029676	chr20,chr20	-,+	C20orf200,MIR133A2	-51856,-38556
chr8:22456495-22457182	chr8	+	22456820	22457206	True	NM_001013842,NM_173686,NR_027715,NM_021174,NR_033902,NM_001198827	chr8,chr8,chr8,chr8,chr8,chr8	+,+,-,+,+,+	C8orf58,C8orf58,FLJ14107,KIAA1967,KIAA1967,C8orf58	-57,-57,42566,5332,4938,-57
chr2:10953276-10953745	chr2	+	10953323	10953415	True	NM_005742,NM_144583	chr2,chr2	-,+	PDIA6,ATP6V1C2	-363,-91599
chr5:40837561-40838509	chr5	+	40837771	40838421	True	NM_032587,NR_002583,NR_037665,NM_000997	chr5,chr5,chr5,chr5	+,-,-,-	CARD6,SNORD72,LOC100506548,RPL37	2988,-4934,-8527,-2384
chr12:64616149-64616436	chr12	+	64616149	64616395	True	NM_007235,NM_152440	chr12,chr12	+,-	XPOT,C12orf66	181757,-73
chr19:35849930-35850166	chr19	+	35849933	35850165	True	NM_005303,NM_152481,NM_005304	chr19,chr19,chr19	+,-,+	FFAR1,FAM187B,FFAR3	-7539,-130305,-496
chr19:35849930-35850166	chr19	+	35862402	35862634	False	NM_207392,NM_005304	chr19,chr19	-,+	KRTDAP,FFAR3	118772,-12965
chr2:34152062-34152276	chr2	+	34152066	34152133	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-413175,-198782
chr10:102508008-102508284	chr10	+	102508270	102508332	True	NM_003990,NM_005004,NM_003989,NM_003988,NM_003987,NM_000278	chr10,chr10,chr10,chr10,chr10,chr10	+,-,+,+,+,+	PAX2,NDUFB8,PAX2,PAX2,PAX2,PAX2	-2853,-218634,-2853,-2853,-2853,-2853
chr5:78812416-78813550	chr5	+	78812599	78813494	True	NM_004272,NM_001114393	chr5,chr5	-,+	HOMER1,PAPD4	-2899,94748
chr9:137533538-137533801	chr9	+	137533538	137533704	True	NR_037469,NM_000093	chr9,chr9	-,+	MIR3689B,COL5A1	208464,-21
chr19:1569235-1570853	chr19	+	1569968	1570774	True	NR_026557,NM_203304,NM_001174118	chr19,chr19,chr19	+,-,-	PLK5P,MEX3D,MEX3D	-45941,-1911,-1911
chr20:55202925-55203521	chr20	+	55202992	55203534	True	NM_080615,NM_003222	chr20,chr20	-,+	GCNT7,TFAP2C	-102011,823
chr5:146217499-146217862	chr5	+	146217505	146217785	True	NM_006706,NM_004576	chr5,chr5	+,-	TCERG1,PPP2R2B	-390683,40436
chr19:43696585-43697594	chr19	+	43696647	43697436	True	NM_002781,NM_001130014,NR_026881	chr19,chr19,chr19	-,-,+	PSG5,PSG5,PRG1	-5959,-5959,155771
chr18:55257493-55258268	chr18	+	55257585	55258141	True	NM_001012515,NM_004852,NM_000140	chr18,chr18,chr18	-,+,-	FECH,ONECUT2,FECH	-3616,-154719,-3616
chr1:148928809-148929371	chr2	-	91846929	91846979	True	NR_003503,NR_027238	chr2,chr2	+,-	GGT8P,LOC654342	116388,1046
chr13:99738092-99738333	chr13	+	99738129	99738235	True	NM_001130049,NM_015296,NM_001144072	chr13,chr13,chr13	-,-,+	DOCK9,DOCK9,UBAC2	475,475,114443
chr19:29397196-29397895	chr19	+	29397230	29397389	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	58648,306802
chr5:56207904-56209301	chr5	+	56208030	56208984	True	NM_153706,NM_001171990,NM_152622	chr5,chr5,chr5	+,+,-	C5orf35,C5orf35,MIER3	-2995,-2995,39028
chr16:90128477-90129655	chr16	+	90128635	90129549	True	NM_052996,NR_023348	chr16,chr16	-,+	PRDM7,GAS8	40,-39686
chr8:42249682-42249901	chr8	+	42249711	42249917	True	NM_014420,NM_001135694,NM_005662	chr8,chr8,chr8	-,+,+	DKK4,VDAC3,VDAC3	-15037,-416,-416
chr8:74207694-74207934	chr8	+	74207713	74207981	True	NM_000971,NM_172037	chr8,chr8	-,+	RPL7,RDH10	-1844,-499
chr15:40886472-40886712	chr15	+	40886479	40886601	True	NM_144508,NM_052849,NM_170589	chr15,chr15,chr15	+,-,+	CASC5,C15orf57,CASC5	-83,-29227,-83
chr7:8474920-8475435	chr7	+	8475068	8475348	True	NM_004968,NM_152745	chr7,chr7	-,+	ICA1,NXPH1	-172883,-1534
chr5:108732418-108734315	chr5	+	108732652	108734220	True	NM_014819,NM_002372	chr5,chr5	-,+	PJA2,MAN2A1	11505,290935
chr20:62247719-62248922	chr20	+	62247811	62248916	True	NM_016434,NM_012384	chr20,chr20	+,-	RTEL1,GMEB2	40246,9515
chr7:20259715-20260627	chr7	+	20259757	20260651	True	NM_182762,NM_002214	chr7,chr7	-,+	MACC1,ITGB8	-2744,110073
chr14:23342824-23343816	chr14	+	23343072	23343780	True	NM_001077351,NM_173527,NM_014045	chr14,chr14,chr14	-,+,+	RBM23,REM2,LRP10	44666,8651,-2169
chr2:54371533-54372788	chr2	+	54371835	54372727	True	NM_001003937,NM_138448	chr2,chr2	-,+	TSPYL6,ACYP2	110739,-29487
chr11:65121233-65121509	chr11	+	65121284	65121494	True	NM_145719,NM_001077241	chr11,chr11	+,-	TIGD3,SLC25A45	787,28698
chr12:121475610-121476693	chr12	+	121475967	121476687	True	NM_198213,NM_003733,NM_000545	chr12,chr12,chr12	-,-,+	OASL,OASL,HNF1A	143,143,-59477
chr11:9479861-9480518	chr11	+	9479947	9480402	True	NM_003442,NR_036539	chr11,chr11	+,-	ZNF143,LOC644656	2109,1902
chr11:93574732-93575433	chr11	+	93574789	93575429	True	NM_001144871,NM_004268	chr11,chr11	-,+	C11orf90,MED17	8289,-57435
chr19:21580928-21581481	chr19	+	21580941	21581522	True	NM_175910,NM_145326,NM_001076678,NM_021269	chr19,chr19,chr19,chr19	+,+,+,-	ZNF493,ZNF493,ZNF493,ZNF708	-1071,-1071,-1071,-68729
chr10:5440305-5440600	chr10	+	5440575	5440649	True	NM_001047160,NM_001171864,NM_024803	chr10,chr10,chr10	+,-,-	NET1,TUBAL3,TUBAL3	13868,6194,6194
chr19:45661323-45661919	chr19	+	45661396	45661948	True	NM_212550,NM_198478	chr19,chr19	+,-	BLOC1S3,NKPD1	20054,1510
chr12:772132-772456	chr12	+	772178	772458	True	NM_001184985,NM_016533	chr12,chr12	+,-	WNK1,NINJ2	89630,347
chr1:178694171-178694507	chr1	+	178694198	178694538	True	NM_152663,NM_004673	chr1,chr1	+,-	RALGPS2,ANGPTL1	51,145727
chr9:125590795-125591108	chr9	+	125590814	125591030	True	NM_080859,NM_005388	chr9,chr9	+,-	OR1K1,PDCL	-28463,-33
chr1:145899305-145900746	chr1	+	145899377	145900688	True	NR_003377,NM_001097616	chr1,chr1	-,+	PDZK1P1,GPR89C	41988,-15567
chr1:145899305-145900746	chr1	-	145788210	145788883	False	NM_001097612,NM_002614	chr1,chr1	-,+	GPR89A,PDZK1	38277,-60601
chr1:145899305-145900746	chr1	+	147441078	147442389	False	NR_003377,NM_001097616	chr1,chr1	-,+	PDZK1P1,GPR89C	41999,-15569
chr5:133339088-133339397	chr5	+	133339103	133339431	True	NR_036625,NR_036624,NM_003374,NM_003202	chr5,chr5,chr5,chr5	-,-,-,+	VDAC1,VDAC1,VDAC1,TCF7	1282,1282,1449,110970
chr1:2161550-2161884	chr1	+	2161666	2161764	True	NM_001146310,NM_003036	chr1,chr1	-,+	C1orf86,SKI	-22494,-1583
chr6:32498623-32499528	chr6	+	32498895	32498967	True	NM_002125,NM_019111	chr6,chr6	-,+	HLA-DRB5,HLA-DRA	-889,-91327
chr22:42917196-42917884	chr22	+	42917297	42917497	True	NR_027786,NM_015703	chr22,chr22	+,-	SERHL,RRP7A	-20763,-1468
chr17:8021708-8022062	chr17	+	8021800	8022078	True	NM_001165967,NR_036201,NM_001165960,NM_021628,NM_032580	chr17,chr17,chr17,chr17,chr17	-,+,-,-,-	HES7,MIR4314,ALOXE3,ALOXE3,HES7	5382,-30477,206,26,5382
chr16:56901019-56901293	chr16	+	56901022	56901298	True	NM_000339,NM_001126108,NR_029680,NM_001126107,NM_005950	chr16,chr16,chr16,chr16,chr16	+,+,+,+,-	SLC12A3,SLC12A3,MIR138-2,SLC12A3,MT1G	-1954,-1954,-8643,-1954,-199045
chr17:19438999-19439947	chr17	+	19439104	19439950	True	NM_002404,NM_018242	chr17,chr17	-,+	MFAP4,SLC47A1	-148572,-1988
chr9:1052155-1053212	chr9	+	1052249	1053209	True	NM_181872,NM_001130865,NM_152569,NM_006557	chr9,chr9,chr9,chr9	+,+,-,+	DMRT2,DMRT2,C9orf66,DMRT2	-1680,-1946,-836356,-1954
chr6:53011311-53012438	chr6	+	53011344	53012209	True	NM_012347,NM_003643	chr6,chr6	+,-	FBXO9,GCM1	-75636,1471
chr15:37029360-37029871	chr15	+	37029414	37029908	True	NR_027320,NM_032499	chr15,chr15	-,+	CSNK1A1P1,C15orf41	80849,-96659
chr3:151161455-151162254	chr3	+	151161458	151161674	True	NM_001178146,NR_031678,NM_001178145	chr3,chr3,chr3	-,+,-	IGSF10,MIR548H2,IGSF10	-2880,185645,-2880
chr19:38180301-38180628	chr19	+	38180417	38180480	True	NM_001172226,NM_152605	chr19,chr19	+,-	ZNF540,ZNF781	-94743,2787
chr19:12511913-12512547	chr19	+	12511949	12512356	True	NM_001080821,NM_153358	chr19,chr19	-,+	ZNF799,ZNF791	45,209375
chr8:145161887-145162220	chr8	+	145161925	145162191	True	NM_030974,NR_024207,NM_032272	chr8,chr8,chr8	-,+,+	SHARPIN,KIAA1875,MAF1	-2785,437,-2671
chr8:59467207-59468994	chr8	+	59467820	59468832	True	NM_000780,NM_005625,NM_001007070,NM_001007067,NM_001007068,NM_001007069	chr8,chr8,chr8,chr8,chr8,chr8	-,+,+,+,+,+	CYP7A1,SDCBP,SDCBP,SDCBP,SDCBP,SDCBP	-55100,-2149,-2149,-2149,-2149,-2149
chr20:44046417-44047188	chr20	+	44046444	44047130	True	NM_014477,NM_001184729,NM_001184728,NM_001048226,NM_015937,NM_001048225,NM_001184730	chr20,chr20,chr20,chr20,chr20,chr20,chr20	-,+,+,+,+,+,+	TP53TG5,PIGT,PIGT,DBNDD2,PIGT,DBNDD2,PIGT	-39487,-1796,-1796,-9874,-1796,-9874,-1796
chr1:55088142-55089015	chr1	+	55088945	55089059	True	NM_176782,NR_026782	chr1,chr1	-,+	FAM151A,HEATR8	191,18367
chr16:85649181-85649440	chr16	+	85649219	85649403	True	NM_001134473,NM_014615,NM_016095	chr16,chr16,chr16	+,+,-	KIAA0182,KIAA0182,GINS2	-4241,-2346,73235
chr1:244624842-244625366	chr1	+	244624876	244625078	True	NM_173807,NM_001126,NM_001130957	chr1,chr1,chr1	+,-,+	C1orf101,ADSS,C1orf101	-254,-9440,-254
chr11:118980371-118981260	chr11	+	118980383	118981240	True	NM_014807,NM_001382	chr11,chr11	+,-	C2CD2L,DPAGT1	-2341,-7598
chr3:142609261-142610918	chr3	+	142609385	142610912	True	NM_013363,NM_001080415	chr3,chr3	-,+	PCOLCE2,U2SURP	-1340,109459
chr16:4464814-4465210	chr16	+	4464813	4465243	True	NM_001201473,NM_001201472,NM_001201479,NM_024535,NM_001135110	chr16,chr16,chr16,chr16,chr16	-,-,-,-,+	CORO7,CORO7,CORO7-PAM16,CORO7,DNAJA3	1769,1769,1769,1769,10614
chr1:47610364-47610572	chr1	+	47610477	47610587	True	NM_005764,NM_001010969	chr1,chr1	-,+	PDZK1IP1,CYP4A22	45234,-7421
chr1:47610364-47610572	chr1	-	47399672	47399782	False	NM_000778,NM_178033	chr1,chr1	-,+	CYP4A11,CYP4X1	7424,89457
chr2:74374569-74374850	chr2	+	74374578	74374786	True	NM_212552,NM_006636,NM_001035505	chr2,chr2,chr2	-,+,-	BOLA3,MTHFD2,BOLA3	303,50903,303
chr6:133074322-133074946	chr6	+	133074548	133074820	True	NR_034175,NR_034174,NR_034173,NM_004665,NM_078488,NM_001016	chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,-,-,+	VNN2,VNN2,VNN2,VNN2,VNN2,RPS12	4255,4255,4255,4266,9831,60887
chr2:85638719-85638923	chr2	+	85638730	85638907	True	NM_001747,NM_198482	chr2,chr2	-,+	CAPG,SH2D6	-1054,23010
chr15:79727336-79728885	chr15	+	79727831	79728908	True	NM_015206,NM_002891	chr15,chr15	+,-	KIAA1024,RASGRF1	-3025,-344616
chr9:133768929-133769297	chr9	+	133768934	133769296	True	NM_005157,NM_198180	chr9,chr9	+,-	ABL1,QRFP	-58154,-21
chr4:55093367-55093584	chr4	+	55093389	55093539	True	NM_012110,NM_006206	chr4,chr4	-,+	CHIC2,PDGFRA	-162601,1724
chr14:77656189-77658152	chr14	+	77656264	77657738	True	NM_174976,NM_020431	chr14,chr14	-,+	ZDHHC22,TMEM63C	-48130,-8221
chr11:72928699-72928981	chr11	+	72928831	72928895	True	NM_014824,NM_002564,NM_176071,NM_176072	chr11,chr11,chr11,chr11	-,+,+,+	FCHSD2,P2RY2,P2RY2,P2RY2	-75688,448,606,448
chr20:45278925-45279672	chr20	+	45279081	45279715	True	NM_022829,NM_030777,NM_001193342,NM_001193339	chr20,chr20,chr20,chr20	-,+,-,-	SLC13A3,SLC2A10,SLC13A3,SLC13A3	435,58563,435,435
chr7:87595495-87595947	chr7	+	87595508	87595985	True	NM_021723,NM_018843	chr7,chr7	+,-	ADAM22,SLC25A40	-31994,-89816
chr9:130472907-130473573	chr9	+	130472974	130473612	True	NM_001002913,NM_144965,NM_001012502	chr9,chr9,chr9	-,+,+	PTRH1,TTC16,C9orf117	4374,4745,-3754
chr19:48280196-48280997	chr19	+	48280898	48280958	True	NM_198479,NM_003009	chr19,chr19	-,+	TPRX1,SEPW1	25953,883
chr1:177143489-177144711	chr1	+	177143545	177144695	True	NM_207108,NM_004319,NM_021165	chr1,chr1,chr1	-,-,+	ASTN1,ASTN1,FAM5B	-9521,-9521,-2964
chr14:23443285-23443875	chr14	+	23443289	23443899	True	NM_001099780,NM_198086,NM_032876	chr14,chr14,chr14	+,-,-	PSMB11,JUB,JUB	67476,2583,7999
chr14:103987472-103987884	chr14	+	103987584	103987933	True	NM_152307,NM_001823	chr14,chr14	+,-	TRMT61A,CKB	7575,1287
chr1:36566920-36567992	chr1	+	36566930	36567873	True	NM_005202,NM_017825	chr1,chr1	-,+	COL8A2,ADPRHL2	-1080,-12529
chr16:2247360-2247725	chr16	+	2247484	2247602	True	NM_001199174,NM_001199175,NM_020764,NM_001199173,NM_022372	chr16,chr16,chr16,chr16,chr16	+,+,-,+,+	MLST8,MLST8,CASKIN1,MLST8,MLST8	8129,7575,-1019,7575,7575
chr4:153416515-153418194	chr4	+	153416707	153418032	True	NR_036092,NR_033797	chr4,chr4	-,+	MIR3140,DKFZP434I0714	-6139,39383
chr13:49080374-49080707	chr13	+	49080401	49080653	True	NM_001268,NM_020377	chr13,chr13	-,+	RCBTB2,CYSLTR2	26713,200297
chr12:54380376-54380876	chr12	+	54380431	54380847	True	NR_029617,NR_003716,NM_017409	chr12,chr12,chr12	+,-,+	MIR196A2,HOTAIR,HOXC10	4674,-17916,-1536
chr19:54040011-54040604	chr19	+	54040191	54040593	True	NM_001079906,NR_002938	chr19,chr19	+,-	ZNF331,LOC284379	739,66208
chr3:113871970-113873070	chr3	+	113872186	113873110	True	NM_000796,NM_024638	chr3,chr3	-,+	DRD3,QTRTD1	24839,-96642
chr17:46671515-46671792	chr17	+	46671589	46671833	True	NR_033204,NR_033205,NR_033202,NR_033203,NR_033201,NM_002147	chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,-	LOC404266,LOC404266,LOC404266,LOC404266,LOC404266,HOXB5	-1964,1486,-3804,-1992,-3823,-486
chr2:43035044-43035262	chr2	+	43035101	43035313	True	NM_020744,NM_012205	chr2,chr2	+,-	MTA3,HAAO	-239493,-15350
chr20:25038316-25038530	chr20	+	25038378	25038480	True	NM_003650,NM_032501	chr20,chr20	+,-	CST7,ACSS1	-108563,1186
chr12:93156910-93158133	chr12	+	93157101	93158163	True	NM_001004330,NM_003566	chr12,chr12	+,-	PLEKHG7,EEA1	-26887,164996
chrX:2928172-2929448	chrX	+	2928287	2929215	True	NM_000047,NM_001011719	chrX,chrX	-,+	ARSE,ARSH	-45793,-3690
chr11:65816703-65816933	chr11	+	65816815	65816975	True	NM_033036,NM_006842	chr11,chr11	-,+	GAL3ST3,SF3B2	-164,2840
chr4:49329467-49329963	chr4	+	49329738	49329802	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-341524,-420923
chr4:49329467-49329963	chr4	-	49284494	49284558	False	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-296280,-375679
chr20:43993404-43994284	chr20	+	43993620	43994152	True	NM_014477,NM_033542,NR_003189,NM_001099791,NM_001197129	chr20,chr20,chr20,chr20,chr20	-,+,+,+,+	TP53TG5,SYS1,SYS1-DBNDD2,SYS1,SYS1	12855,-1931,-1862,-1931,-3094
chr16:31470694-31470912	chr16	+	31470698	31470892	True	NM_001136509,NM_024742,NM_001105247	chr16,chr16,chr16	-,+,+	ZNF843,ARMC5,ARMC5	-16350,-432,-432
chr1:170927243-170928438	chr1	+	170927297	170928028	True	NM_025063,NR_031627	chr1,chr1	+,-	C1orf129,MIR1295	-22719,142977
chr5:147253491-147254227	chr5	+	147254096	147254164	True	NM_054023,NM_206966	chr5,chr5	+,-	SCGB3A2,C5orf46	4109,31987
chr6:155413190-155414692	chr6	+	155413513	155414731	True	NM_012454,NM_016020	chr6,chr6	+,-	TIAM2,TFB1M	-2141,220936
chr6:2764567-2765275	chr6	+	2764627	2765184	True	NM_001012418,NM_020135,NM_130395	chr6,chr6,chr6	-,+,+	MYLK4,WRNIP1,WRNIP1	-13473,481,481
chr2:242800204-242800574	chr2	+	242800316	242800430	True	NM_173821	chr2	+	C2orf85	11455
chr10:102241995-102242202	chr10	+	102242024	102242244	True	NM_015490,NM_003393	chr10,chr10	-,+	SEC31B,WNT8B	37401,-19263
chr19:44118538-44118909	chr19	+	44118538	44118672	True	NM_001145641,NM_182498	chr19,chr19	+,-	SRRM5,ZNF428	-2336,5392
chr19:7743579-7744797	chr19	+	7743828	7744739	True	NM_001042461,NM_001042462,NM_001193374,NM_174894,NM_174918,NM_002002,NM_020415	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,-,+	TRAPPC5,TRAPPC5,RETN,TRAPPC5,C19orf59,FCER2,RETN	1024,967,-9907,1021,-1936,22344,-9907
chr21:30391755-30392095	chr21	+	30391761	30391841	True	NM_016940,NM_001001992,NM_001032410,NM_006447	chr21,chr21,chr21,chr21	-,+,+,+	RWDD2B,USP16,USP16,USP16	-76,5096,5096,5096
chr13:103047312-103047837	chr13	+	103047464	103047873	True	NR_036487,NR_036486,NM_175929	chr13,chr13,chr13	+,-,-	LOC283481,LOC283480,FGF14	-587,-595,6301
chr1:236225654-236227278	chr1	+	236226075	236227266	True	NM_002508,NM_003272	chr1,chr1	-,+	NID1,GPR137B	1265,78565
chr8:128750239-128750634	chr8	+	128750255	128750603	True	NM_002467,NR_024393	chr8,chr8	+,-	MYC,LOC727677	-1991,-255871
chr6:14844872-14845346	chr6	+	14844934	14845236	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	401290,818109
chr2:108989157-108990067	chr2	+	108989262	108990085	True	NR_024439,NM_006588	chr2,chr2	-,+	LOC729121,SULT1C4	-546679,4335
chr15:29855963-29857883	chr15	+	29856300	29857675	True	NM_015307,NR_026859	chr15,chr15	-,+	FAM189A1,FAM7A3	5309,538259
chr17:79671144-79671614	chr17	+	79671284	79671654	True	NM_001040025,NM_002949,NM_012140	chr17,chr17,chr17	-,+,+	ARL16,MRPL12,SLC25A10	-20330,-935,7716
chr6:33391144-33392745	chr6	+	33391186	33392572	True	NM_001014838,NM_006772,NM_001014433,NM_001014837,NM_001014840,NM_015921	chr6,chr6,chr6,chr6,chr6,chr6	-,+,-,-,-,-	CUTA,SYNGAP1,CUTA,CUTA,CUTA,CUTA	-5121,-3390,-5121,-5121,-5121,-5121
chr6:33391144-33392745	chr6_ssto_hap7	+	4871432	4872818	False	NM_001014837,NM_001014840,NM_001014838,NM_001014433,NM_006772	chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7	-,-,-,-,+	CUTA,CUTA,CUTA,CUTA,SYNGAP1	-5121,-5121,-5121,-5121,-3390
chr11:82905047-82905716	chr11	+	82905076	82905514	True	NM_182603,NM_021825	chr11,chr11	+,-	ANKRD42,CCDC90B	-42,91913
chr11:804710-804952	chr11	+	804713	804783	True	NM_145887,NM_145886,NM_024698,NM_001191060,NM_001191061,NM_001004,NR_002585	chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,-,+,+	LRDD,LRDD,SLC25A22,SLC25A22,SLC25A22,RPLP2,SNORA52	517,517,-8450,-6718,-6444,5152,6897
chr11:47198105-47198485	chr11	+	47198109	47198411	True	NM_032389,NM_000107,NM_001184974,NM_001184975,NM_016223	chr11,chr11,chr11,chr11,chr11	-,+,-,-,-	ARFGAP2,DDB2,PACSIN3,PACSIN3,PACSIN3	58,38081,9649,9071,9649
chr20:34283683-34284748	chr20	+	34283974	34284554	True	NM_080748,NM_001198989,NM_021100,NR_037570	chr20,chr20,chr20,chr20	+,-,-,-	ROMO1,NFS1,NFS1,NFS1	2677,2785,2785,2785
chr4:175626407-175626771	chr4	+	175626433	175626816	True	NM_001130703,NM_001042543	chr4,chr4	+,-	ADAM29,GLRA3	212692,123704
chr1:183992794-183993645	chr1	+	183992863	183993476	True	NM_015101,NM_001127394	chr1,chr1	-,+	GLT25D2,TSEN15	13450,27334
chr19:35761687-35762063	chr19	+	35761766	35761960	True	NM_003367,NM_207291,NM_152481	chr19,chr19,chr19	+,+,-	USF2,USF2,FAM187B	-1921,-1921,-42138
chr10:105995709-105996787	chr10	+	105995933	105996801	True	NM_001191003,NM_025145	chr10,chr10	+,-	GSTO1,WDR96	17150,-3813
chrX:48687052-48687610	chrX	+	48687156	48687288	True	NM_181532,NM_013271	chrX,chrX	+,-	ERAS,PCSK1N	-6,6722
chr2:120982640-120983213	chr2	+	120982680	120983191	True	NM_002881,NR_000034	chr2,chr2	+,-	RALB,TMEM185B	27222,-1696
chr12:56625668-56626041	chr12	+	56625786	56625924	True	NM_173596,NM_024068,NM_194359,NM_001135195	chr12,chr12,chr12,chr12	+,+,-,+	SLC39A5,OBFC2B,RNF41,SLC39A5	-2017,-7712,-10051,-1336
chr6:138810821-138811929	chr6	+	138811192	138811744	True	NM_001144060,NM_014320	chr6,chr6	-,+	NHSL1,HEBP2	8886,-85915
chr19:35530234-35530480	chr19	+	35530244	35530450	True	NM_199037,NM_001037,NM_182983,NR_024561,NM_002151	chr19,chr19,chr19,chr19,chr19	+,+,+,-,+	SCN1B,SCN1B,HPN,LOC100128675,HPN	-8703,-8703,959,66775,959
chr3:186266944-186267741	chr3	+	186267133	186267756	True	NM_016306,NM_017541	chr3,chr3	+,-	DNAJB11,CRYGS	20710,-4966
chr9:100819730-100820271	chr9	+	100819767	100820039	True	NM_018946,NM_014788	chr9,chr9	+,-	NANS,TRIM14	-859,61491
chr5:137882893-137883477	chr5	+	137883010	137883374	True	NM_004730,NM_001964	chr5,chr5	-,+	ETF1,EGR1	-4078,-81893
chr21:36259491-36260495	chr21	+	36259675	36260293	True	NR_024351,NM_001001890,NM_001122607	chr21,chr21,chr21	+,-,-	NCRNA00160,RUNX1,RUNX1	-163623,744,744
chrX:70933653-70934010	chrX	+	70933709	70933999	True	NR_034005,NM_001145140,NM_001145139	chrX,chrX,chrX	+,-,-	FLJ46446,CXorf49,CXorf49B	-16714,4186,4186
chrX:70933653-70934010	chrX	-	70987275	70987565	False	NR_001568,NM_001145140,NM_001145139	chrX,chrX,chrX	-,+,+	BCYRN1,CXorf49,CXorf49B	-38313,-4186,-4186
chr2:122494599-122494875	chr2	+	122494675	122494923	True	NM_032390,NM_004622	chr2,chr2	-,+	MKI67IP,TSN	-172,18197
chr18:14393254-14393474	chr13	-	19239884	19239956	False	NR_027995,NR_026852	chr13,chr13	-,+	LOC284232,LOC348021	206203,342442
chr18:14393254-14393474	chr18	+	14393325	14393521	True	NR_024076,NR_026756	chr18,chr18	-,+	CXADRP3,LOC284233	105234,-55954
chr18:14393254-14393474	chr21	-	15135167	15135239	False	NM_174981,NR_026755	chr21,chr21	+,-	POTED,C21orf15	-152720,85496
chr6:56709073-56709392	chr6	+	56709295	56709395	True	NM_152731,NM_001723	chr6,chr6	+,-	BEND6,DST	110377,-201601
chr10:17248417-17249059	chr10	+	17248447	17249027	True	NM_003380,NM_004412	chr10,chr10	+,-	VIM,TRDMT1	21230,-4377
chr16:16666679-16667635	chr16	+	16666695	16667469	True	NR_036447,NM_001079528	chr16,chr16	+,-	PKD1P1,ABCC6	-255280,-349367
chr16:16666679-16667635	chr16	-	18791483	18792256	False	NM_001030009,NM_001019,NM_024847	chr16,chr16,chr16	-,-,+	RPS15A,RPS15A,TMC7	9450,9450,202999
chr5:52081225-52081728	chr5	+	52081490	52081707	True	NM_004531,NM_015946,NM_181501	chr5,chr5,chr5	-,+,+	MOCS2,PELO,ITGA1	323681,2066,2428
chr2:2338763-2340445	chr2	+	2338763	2340478	True	NR_024468,NM_015025	chr2,chr2	+,-	LOC730811,MYT1L	-15810,-3718
chr2:268822-270126	chr2	+	268859	270100	True	NM_007099,NM_001040649,NM_004300,NR_024080,NM_001159597,NM_015677	chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,-,-	ACP1,ACP1,ACP1,ACP1,SH3YL1,SH3YL1	-4049,-4049,-4049,-4049,-4791,-4791
chr9:111882140-111883863	chr9	+	111882470	111883890	True	NM_032012,NM_017832	chr9,chr9	-,+	C9orf5,C9orf6	-245,-185848
chr10:46171345-46171746	chr10	+	46171507	46171756	True	NM_174890,NM_001169106,NM_001128324	chr10,chr10,chr10	-,+,-	ANUBL1,FAM21C,ANUBL1	-3256,50891,-3256
chr10:42863252-42863452	chr10	+	42863259	42863501	True	NR_024380,NR_026827	chr10,chr10	-,+	LOC441666,LOC84856	42,107437
chr10:42863252-42863452	chr4	+	127989803	127989869	False	NM_152778,NM_015693	chr4,chr4	-,+	MFSD8,INTU	897320,564217
chr17:56064658-56065042	chr17	+	56064705	56064989	True	NM_007146,NM_080677	chr17,chr17	-,+	VEZF1,DYNLL2	676,95790
chr17:27053981-27054444	chr17	+	27053980	27054393	True	NM_001144942,NR_024575,NR_024579,NM_001144943,NM_000984,NR_000014,NM_178170,NM_031934,NR_000010,NR_000013,NM_138463,NM_001142625,NM_001160407,NM_001142624,NR_000009	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,+,+,+,-,+,+,-,-,-,-,+	RAB34,RAB34,RAB34,RAB34,RPL23A,SNORD42A,NEK8,RAB34,SNORD4A,SNORD42B,TLCD1,RAB34,TLCD1,RAB34,SNORD4B	-9072,-8729,-8729,-8694,-7031,-3584,1438,-9072,-4431,-6463,-750,-8694,-31,-8694,-3332
chr2:20498349-20499227	chr2	+	20498668	20499148	True	NM_015317,NM_004040	chr2,chr2	-,+	PUM2,RHOB	28046,147686
chr17:48280695-48281689	chr17	+	48280812	48281704	True	NM_001135697,NM_000088	chr17,chr17	+,-	SGCA,COL1A1	-37497,-1812
chr1:150522871-150523201	chr1	+	150522910	150523126	True	NM_019032,NM_001197320,NM_025008,NR_036211	chr1,chr1,chr1,chr1	+,-,+,+	ADAMTSL4,MCL1,ADAMTSL4,MIR4257	-1063,29138,-1063,1278
chr19:5839600-5840050	chr19	+	5839684	5840032	True	NM_001040701,NM_000150,NM_004558	chr19,chr19,chr19	-,-,+	FUT6,FUT6,NRTN	20,20,-15917
chr5:34932241-34932836	chr5	+	34932541	34932785	True	NM_194283,NM_002853,NM_001012339	chr5,chr5,chr5	+,-,+	DNAJC21,RAD1,DNAJC21	-2901,-16761,-2901
chr3:121555554-121556309	chr3	+	121555832	121556346	True	NM_001023570,NM_001023571,NM_018456	chr3,chr3,chr3	-,-,+	IQCB1,IQCB1,EAF2	-1906,-1906,-1851
chr1:173550380-173551689	chr1	+	173550550	173551670	True	NM_001195190,NM_178527	chr1,chr1	+,-	LOC730159,SLC9A11	52990,20613
chr13:103349044-103349331	chr13	+	103349045	103349365	True	NM_003291,NM_001010977	chr13,chr13	+,-	TPP2,METTL21C	-99810,-2191
chr14:23832281-23833418	chr14	+	23832424	23833395	True	NM_032459,NM_172314,NM_005864,NM_022789	chr14,chr14,chr14,chr14	-,+,-,+	EFS,IL25,EFS,IL25	1497,8622,1497,8674
chr4:164062371-164064019	chr4	+	164062833	164063988	True	NM_006174,NM_001128931	chr4,chr4	+,-	NPY5R,NAF1	201102,24145
chr2:54483275-54483909	chr2	+	54483325	54483726	True	NM_001003937,NM_001100396	chr2,chr2	-,+	TSPYL6,C2orf73	-32,74344
chr2:85582977-85583210	chr2	+	85582994	85583227	True	NM_001135022,NM_001135023,NM_001135021,NM_032213,NM_017750	chr2,chr2,chr2,chr2,chr2	+,+,+,+,-	ELMOD3,ELMOD3,ELMOD3,ELMOD3,RETSAT	-1203,-1203,-1203,-1203,-1173
chr5:175138661-175139423	chr5	+	175138677	175139339	True	NM_022304,NM_032361	chr5,chr5	+,-	HRH2,THOC3	-30264,256256
chr10:99093385-99093685	chr10	+	99093405	99093607	True	NM_005479,NM_012083	chr10,chr10	+,-	FRAT1,FRAT2	-14434,901
chr15:90356315-90356685	chr15	+	90356363	90356695	True	NM_001039958,NM_001150	chr15,chr15	+,-	MESP2,ANPEP	-36825,1427
chr4:100809753-100810081	chr4	+	100809752	100810091	True	NM_021970,NR_024170,NR_002799	chr4,chr4,chr4	-,-,+	LAMTOR3,LAMTOR3,LOC256880	5670,5670,61544
chr14:100624027-100624278	chr14	+	100624027	100624114	True	NM_003403,NM_206918	chr14,chr14	+,-	YY1,DEGS2	80987,1959
chr3:152879311-152879543	chr3	+	152879395	152879581	True	NM_002886,NM_001123228	chr3,chr3	+,-	RAP2B,TMEM14E	447,-820616
chr14:76835910-76837724	chr14	+	76836308	76837611	True	NM_004452,NM_003239	chr14,chr14	+,-	ESRRB,TGFB3	78,-388216
chr12:54668646-54669184	chr12	+	54668803	54668951	True	NM_002136,NM_012117,NM_031157,NR_002944	chr12,chr12,chr12,chr12	+,-,+,+	HNRNPA1,CBX5,HNRNPA1,HNRNPA1P10	5536,5014,5536,5581
chr22:39436955-39437259	chr22	+	39436960	39437304	True	NM_145298,NM_001006666,NM_175709	chr22,chr22,chr22	+,+,-	APOBEC3F,APOBEC3F,CBX7	-338,-338,111284
chr22:39436955-39437259	chr22	+	39473361	39473450	False	NM_021822,NM_175709	chr22,chr22	+,-	APOBEC3G,CBX7	-441,75177
chr16:4781791-4783590	chr16	+	4781871	4782772	True	NM_133450,NM_139170	chr16,chr16	-,+	ANKS3,C16orf71	1447,1516
chr7:28222709-28223313	chr7	+	28222754	28223358	True	NR_034097,NM_175061	chr7,chr7	+,-	LOC100128081,JAZF1	-2744,-2317
chr22:20105922-20107042	chr22	+	20105976	20106860	True	NM_182984,NM_022727,NM_002882	chr22,chr22,chr22	-,-,+	TRMT2A,TRMT2A,RANBP1	-1208,-1208,-1003
chr5:131821999-131822679	chr5	+	131822077	131822687	True	NM_005732,NM_002198	chr5,chr5	+,-	RAD50,IRF1	69928,3828
chr22:23415612-23415895	chr22	+	23415696	23415932	True	NM_002073,NM_014433	chr22,chr22	+,-	GNAZ,RTDR1	-3078,68359
chr2:10951842-10952329	chr2	+	10951889	10952023	True	NM_005742,NM_144583	chr2,chr2	-,+	PDIA6,ATP6V1C2	987,-90165
chr1:236768935-236770060	chr1	+	236768939	236770109	True	NM_018072,NM_001103	chr1,chr1	-,+	HEATR1,ACTN2	-1098,79660
chr16:53538291-53538739	chr16	+	53538354	53538768	True	NM_022476,NM_001012398,NM_005611	chr16,chr16,chr16	-,-,+	AKTIP,AKTIP,RBL2	-1184,-1184,-70054
chr12:70195459-70195839	chr12	+	70195464	70195856	True	NM_001024647,NM_032735	chr12,chr12	+,-	RAB3IP,BEST3	-22762,-102268
chr10:92913307-92913662	chr10	+	92913331	92913707	True	NR_002779,NM_032373	chr10,chr10	-,+	NUDT9P1,PCGF5	-494,66661
chr9:90500066-90501211	chr9	+	90500362	90501144	True	NM_001039803,NM_178828	chr9,chr9	-,+	CDK20,C9orf79	88601,-2641
chr15:41141298-41142338	chr15	+	41141548	41142217	True	NM_017726,NM_003710,NM_181642,NM_001032367	chr15,chr15,chr15,chr15	-,+,+,+	PPP1R14D,SPINT1,SPINT1,SPINT1	-20641,-5353,-5353,-4956
chr2:27666952-27667673	chr2	+	27666966	27667488	True	NM_177983,NM_173853,NM_001168364	chr2,chr2,chr2	-,+,+	PPM1G,KRTCAP3,KRTCAP3	-34470,-1784,-1784
chr6:89856433-89857790	chr6	+	89856508	89857669	True	NM_001010853,NM_080743	chr6,chr6	+,-	PM20D2,SRSF12	-790,-28708
chrX:15856324-15857860	chrX	+	15856414	15857671	True	NM_005089,NM_003916	chrX,chrX	+,-	ZRSR2,AP1S2	-47898,15479
chr10:70750746-70750949	chr10	+	70750876	70750936	True	NM_001057,NM_015634	chr10,chr10	-,+	TACR2,KIAA1279	425788,-2451
chr1:157771977-157773776	chr1	+	157771995	157773713	True	NM_001159397,NM_018240	chr1,chr1	-,+	FCRL1,KIRREL	16277,189349
chr7:88455725-88456853	chr7	+	88455781	88456855	True	NM_152706,NM_181646	chr7,chr7	-,+	C7orf62,ZNF804B	-30750,-67087
chr4:46127295-46128328	chr4	+	46127320	46128360	True	NM_173536,NM_000812	chr4,chr4	-,+	GABRG1,GABRB1	-1238,904934
chr5:87974270-87974502	chr5	+	87974367	87974529	True	NR_024383,NR_015436,NM_022650,NR_024384	chr5,chr5,chr5,chr5	-,-,+,-	LOC645323,LOC645323,RASA1,LOC645323	-105,6141,-1409652,-5221
chr2:39666476-39667762	chr2	+	39666491	39667551	True	NR_037875,NM_003618	chr2,chr2	+,-	LOC728730,MAP4K3	-1992,-2272
chr13:58207161-58207400	chr13	+	58207184	58207426	True	NM_001040429,NM_030932	chr13,chr13	+,-	PCDH17,DIAPH3	-1446,2379967
chr10:102748428-102748869	chr10	+	102748484	102748892	True	NM_001163812,NM_001163813,NM_001163814,NM_032112,NM_021830,NM_176794,NM_176793,NM_176792,NM_032429	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,-,+,-,-,-,+	C10orf2,C10orf2,C10orf2,MRPL43,C10orf2,MRPL43,MRPL43,MRPL43,LZTS2	-1242,-1242,-1242,-1212,-1242,-1212,-1212,-1212,7971
chr15:81982920-81984034	chr15	+	81983315	81983580	True	NM_001080532,NM_004513	chr15,chr15	-,+	TMC3,IL16	-316897,-394118
chrX:101187141-101187484	chrX	+	101187224	101187372	True	NM_001011657,NM_080390	chrX,chrX	-,+	ZMAT1,TCEAL2	-185,193287
chr20:3684165-3685564	chr20	+	3684430	3685205	True	NM_001197327,NM_023068	chr20,chr20	+,-	HSPA12B,SIGLEC1	28111,2627
chr5:139921998-139922399	chr5	+	139922312	139922397	True	NM_001035235,NM_003732	chr5,chr5	-,+	SRA1,EIF4EBP3	15332,4853
chr12:6834481-6835334	chr12	+	6834690	6835064	True	NM_001164095,NM_016319,NM_153685,NM_001164093,NM_001164094	chr12,chr12,chr12,chr12,chr12	+,+,-,+,+	COPS7A,COPS7A,C12orf53,COPS7A,COPS7A	-1504,-1569,-24878,-1300,-1599
chr2:192702314-192703423	chr2	+	192702417	192703421	True	NM_004657,NM_001031716	chr2,chr2	-,+	SDPR,OBFC2A	8635,-159614
chr10:43966697-43968646	chr10	+	43966748	43968275	True	NR_026693,NM_001098204	chr10,chr10	+,-	ZNF487P,HNRNPF	-34225,-62052
chr2:101867916-101868381	chr2	+	101868297	101868377	True	NR_003070,NM_017546	chr2,chr2	-,+	SNORD89,C2orf29	21184,967
chr6:121766138-121766382	chr6	+	121766141	121766278	True	NM_000165,NM_152730	chr6,chr6	+,-	GJA1,C6orf170	-9456,-110497
chr3:186843828-186844040	chr3	+	186843847	186843928	True	NM_052969,NM_153708	chr3,chr3	-,+	RPL39L,RTP1	13392,71345
chr17:48639791-48640290	chr17	+	48639828	48640266	True	NM_198377,NM_198376,NM_001267,NM_198396,NM_198384,NM_198379,NM_198378,NM_198386,NM_198387,NM_198397,NM_198385,NM_198382,NM_198383,NM_198380,NM_018896,NM_198388	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,-,+,+,+,+,+,+,+,+,+,+,+,+,+	CACNA1G,CACNA1G,CHAD,CACNA1G,CACNA1G,CACNA1G,CACNA1G,CACNA1G,CACNA1G,CACNA1G,CACNA1G,CACNA1G,CACNA1G,CACNA1G,CACNA1G,CACNA1G	-1430,-1430,-93601,-1430,-1430,-1430,-1430,-1430,-1430,-1430,-1430,-1430,-1430,-1430,-1430,-1430
chr19:6277547-6278842	chr19	+	6277609	6278594	True	NM_006012,NM_005934	chr19,chr19	+,-	CLPP,MLLT1	82868,1415
chr9:20680278-20681388	chr9	+	20680578	20681163	True	NM_004529,NM_017794	chr9,chr9	-,+	MLLT3,KIAA1797	-58064,-22331
chr3:69994980-69995417	chr3	+	69994991	69995453	True	NM_198178,NM_001184968,NM_000248,NM_015123,NM_198158	chr3,chr3,chr3,chr3,chr3	+,+,+,-,+	MITF,MITF,MITF,FRMD4B,MITF	-9291,-9291,-9291,-559561,-9291
chr17:29424398-29425671	chr17	+	29424543	29425673	True	NM_001128147,NM_001042492,NM_000267,NM_024683	chr17,chr17,chr17,chr17	+,+,+,-	NF1,NF1,NF1,C17orf42	-2655,-2655,-2655,-191257
chr17:7230520-7231813	chr17	+	7230877	7231725	True	NM_001005408,NM_032442,NM_014716	chr17,chr17,chr17	-,-,+	NEURL4,NEURL4,ACAP1	963,963,8122
chr1:89155585-89156954	chr1	+	89155596	89156650	True	NM_001514,NM_006256	chr1,chr1	-,+	GTF2B,PKN2	200708,-5740
chrX:52683576-52684939	chrX	+	52683576	52684690	True	NR_027250,NM_173358	chrX,chrX	+,-	SSX8,SSX7	-31642,0
chrX:52683576-52684939	chrX	+	48165356	48165406	False	NM_021014,NM_005635	chrX,chrX	-,+	SSX3,SSX1	50786,-50610
chr1:163145378-163146131	chr1	+	163145377	163146129	True	NM_001195303,NM_001113380	chr1,chr1	-,+	RGS5,RGS4	26546,-103733
chr7:106499613-106501028	chr7	+	106499933	106500899	True	NM_175884,NM_002649	chr7,chr7	-,+	FLJ36031,PIK3CG	-198299,5024
chr7:48242928-48243432	chr7	+	48243074	48243406	True	NM_152701,NM_152782	chr7,chr7	+,-	ABCA13,SUN3	-32069,-174358
chr9:34728992-34729280	chr9	+	34729012	34729280	True	NM_004512,NM_001141917	chr9,chr9	+,-	IL11RA,C9orf144B	-75139,305
chr4:2812262-2812972	chr4	+	2812267	2812971	True	NM_001145855,NM_001145856,NM_024309,NM_003023	chr4,chr4,chr4,chr4	+,+,-,+	SH3BP2,SH3BP2,TNIP2,SH3BP2	974,6940,-54164,7569
chr20:60760390-60760943	chr20	+	60760705	60760813	True	NM_007232,NM_015666	chr20,chr20	-,+	HRH3,GTPBP5	34560,-2675
chr19:9606847-9608065	chr19	+	9607188	9608024	True	NM_152476,NM_001172651	chr19,chr19	-,+	ZNF560,ZNF177	1305,-120247
chr7:99867964-99868189	chr7	+	99868052	99868238	True	NR_028040,NM_001004351,NR_028039,NR_028038,NM_178831	chr7,chr7,chr7,chr7,chr7	-,+,-,-,-	GATS,SPDYE3,GATS,GATS,GATS	1667,37086,1667,1667,1667
chr7:99867964-99868189	chr7	-	72570796	72570920	False	NR_002206,NR_003664,NR_003580	chr7,chr7,chr7	+,-,+	GTF2IP1,SPDYE8P,LOC100093631	-1821,-70487,-1835
chr7:99867964-99868189	chr7	-	74380492	74380678	False	NM_001025202,NM_001145063	chr7,chr7	-,+	STAG3L2,GATSL1	-73761,-1460
chr7:99867964-99868189	chr7	+	74651554	74651678	False	NR_002206,NM_001003795,NR_003580	chr7,chr7,chr7	-,+,-	GTF2IP1,GTF2IRD2B,LOC100093631	1817,-143265,1831
chr7:99867964-99868189	chr7	+	74865771	74865895	False	NM_001145064,NR_003664	chr7,chr7	-,+	GATSL2,SPDYE8P	1496,70637
chr6:28317834-28318064	chr6	+	28317992	28318089	True	NM_024493,NM_145909,NM_001135215	chr6,chr6,chr6	+,-,-	ZKSCAN3,ZNF323,ZNF323	-352,3933,6009
chr14:100708081-100708884	chr14	+	100708461	100708695	True	NM_003403,NM_001039355	chr14,chr14	+,-	YY1,SLC25A29	-3420,64223
chr13:96299108-96300959	chr13	+	96299368	96300892	True	NM_006260,NM_198968,NM_014934	chr13,chr13,chr13	+,-,-	DNAJC3,DZIP1,DZIP1	28500,-2411,-2411
chr1:12185697-12186077	chr1	+	12185717	12186113	True	NM_152942,NM_138346	chr1,chr1	+,-	TNFRSF8,KIAA2013	50,-199232
chr2:197663440-197664090	chr2	+	197663653	197664132	True	NM_001080539,NM_012086	chr2,chr2	+,-	CCDC150,GTF3C3	-159358,343
chr1:234509703-234510035	chr1	+	234509740	234510084	True	NM_001012985,NM_005646	chr1,chr1	+,-	C1orf31,TARBP1	-362,104815
chr2:190647261-190648262	chr2	+	190647283	190648301	True	NM_001128150,NM_001128144,NM_001128143,NM_016467,NM_000534	chr2,chr2,chr2,chr2,chr2	-,+,+,-,+	ORMDL1,PMS1,PMS1,ORMDL1,PMS1	846,509,509,846,509
chr22:39495122-39495710	chr22	+	39495246	39495416	True	NM_001166004,NM_181773,NM_175709,NM_001166002,NM_001166003	chr22,chr22,chr22,chr22,chr22	+,+,-,+,+	APOBEC3H,APOBEC3H,CBX7,APOBEC3H,APOBEC3H	-2082,-2082,53172,-2082,-2082
chr7:65667589-65667829	chr7	+	65667588	65667715	True	NR_026873,NM_003596	chr7,chr7	-,+	NCRNA00174,TPST1	197735,2543
chr15:71446576-71448138	chr15	+	71446640	71448136	True	NM_024817,NM_001102658	chr15,chr15	+,-	THSD4,CT62	-12903,-38801
chr12:43073521-43074057	chr12	+	43073525	43074057	True	NM_016488,NM_153026	chr12,chr12	+,-	PPHLN1,PRICKLE1	-353629,-89953
chr2:240965268-240965543	chr2	+	240965282	240965368	True	NM_001005853,NR_037808,NM_004544	chr2,chr2,chr2	-,+,-	OR6B2,LOC150935,NDUFA10	4538,-280779,-463
chr6:80823192-80823500	chr6	+	80823207	80823547	True	NM_183050,NM_022726,NM_000056	chr6,chr6,chr6	+,-,+	BCKDHB,ELOVL4,BCKDHB	-6914,-165892,-6914
chr6:82559570-82560262	chr6	+	82559722	82560305	True	NM_006670,NM_017633	chr6,chr6	+,-	TPBG,FAM46A	512617,-97294
chr2:179349502-179350062	chr2	+	179349559	179350107	True	NM_019091,NM_001135212,NM_181342	chr2,chr2,chr2	+,-,-	PLEKHA3,FKBP7,FKBP7	-4411,-6204,-6204
chr21:44897377-44897582	chr21	+	44897377	44897445	True	NR_026960,NR_026863	chr21,chr21	+,-	C21orf125,C21orf84	-27524,708
chr1:43737969-43738425	chr1	+	43737974	43738348	True	NM_182517,NM_144626	chr1,chr1	-,+	C1orf210,TMEM125	12952,-2360
chr3:184095308-184095861	chr3	+	184095340	184095778	True	NM_001177598,NM_003741,NM_000460,NM_001177597	chr3,chr3,chr3,chr3	-,+,-,-	THPO,CHRD,THPO,THPO	204,2082,204,204
chr3:12803620-12803942	chr3	+	12803847	12803993	True	NM_001162499,NM_018306	chr3,chr3	+,-	CAND2,TMEM40	34177,-3039
chr6:39197368-39197798	chr6	+	39197497	39197761	True	NM_003740,NM_002062	chr6,chr6	-,+	KCNK5,GLP1R	-246,-180991
chr3:145878623-145878853	chr3	+	145878819	145878889	True	NM_182943,NM_000935,NM_003412	chr3,chr3,chr3	-,-,+	PLOD2,PLOD2,ZIC1	443,443,1248291
chr10:76969387-76969676	chr10	+	76969515	76969643	True	NM_001184783,NM_001184823,NM_144589,NM_003375,NR_033675	chr10,chr10,chr10,chr10,chr10	+,+,-,+,+	VDAC2,VDAC2,COMTD1,VDAC2,VDAC2	656,268,26177,656,656
chr17:42469959-42471067	chr17	+	42470579	42470959	True	NM_000419,NM_002087	chr17,chr17	-,+	ITGA2B,GRN	-3706,-48149
chr5:110076141-110076372	chr5	+	110076140	110076308	True	NM_001039763,NM_138773	chr5,chr5	-,+	TMEM232,SLC25A46	-13690,-1437
chr17:7579921-7580345	chr17	+	7580024	7580208	True	NM_001126116,NM_001126117,NM_001126115,NM_001143990	chr17,chr17,chr17,chr17	-,-,-,+	TP53,TP53,TP53,WRAP53	-1213,-1213,-1213,9180
chr12:48882298-48883299	chr12	+	48882358	48883142	True	NM_152319,NM_002289	chr12,chr12	+,-	C12orf54,LALBA	-6130,80747
chr2:169743322-169743650	chr2	+	169743380	169743660	True	NM_001081686,NM_020675	chr2,chr2	+,-	G6PC2,SPC25	14089,3334
chr12:54811899-54812199	chr12	+	54811899	54812197	True	NM_005337,NM_002205	chr12,chr12	+,-	NCKAP1L,ITGA5	79297,903
chrX:118371239-118371856	chrX	+	118371269	118371873	True	NM_006667,NM_020721	chrX,chrX	+,-	PGRMC1,KIAA1210	-1109,-86727
chr16:31021565-31021768	chr16	+	31021676	31021736	True	NM_052874,NM_004604	chr16,chr16	-,+	STX1B,STX4	143,23166
chr7:99101068-99101428	chr7	+	99101073	99101345	True	NM_145102,NM_014569,NM_032164	chr7,chr7,chr7	+,+,-	ZKSCAN5,ZKSCAN5,ZNF394	927,1227,-3196
chr11:122935635-122936456	chr11	+	122936090	122936508	True	NR_027288,NM_153201,NM_006597	chr11,chr11,chr11	+,-,-	LOC341056,HSPA8,HSPA8	-47876,-3246,-3246
chr19:16295463-16296017	chr19	+	16295485	16296053	True	NM_014077,NM_054113	chr19,chr19	+,-	FAM32A,CIB3	181,-11199
chr2:241396148-241396355	chr2	+	241396198	241396310	True	NR_024014,NR_029702	chr2,chr2	-,+	PP14571,MIR149	-81,-831
chr1:15781997-15782573	chr1	+	15782004	15782556	True	NM_033440,NM_001229	chr1,chr1	+,-	CELA2A,CASP9	666,68434
chr9:35828970-35829203	chr9	+	35828977	35829169	True	NM_001042589,NM_016446,NM_001042590,NM_001012446	chr9,chr9,chr9,chr9	+,+,+,-	TMEM8B,TMEM8B,TMEM8B,C9orf128	59,52,343,-233
chr12:55757921-55759553	chr12	+	55758474	55759569	True	NM_001005493,NM_001005497	chr12,chr12	-,+	OR6C6,OR6C75	-69458,-140
chr21:30692595-30693744	chr21	+	30692597	30693697	True	NR_027655,NM_006585	chr21,chr21	+,-	BACH1,CCT8	-15091,-246587
chrX:69503873-69504120	chrX	+	69503901	69504158	True	NM_012310,NM_016484,NM_001032726	chrX,chrX,chrX	+,-,+	KIF4A,PDZD11,RAB41	5720,5690,-1940
chr3:160118244-160118523	chr3	+	160118271	160118403	True	NR_029525,NM_001002800,NR_029663,NM_020800,NM_005496,NM_001190241	chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,-,+,-	MIR16-2,SMC4,MIR15B,IFT80,SMC4,IFT80	4129,-897,3972,-951,9,-951
chr7:87327185-87327506	chr7	+	87327230	87327390	True	NM_138290,NM_000927	chr7,chr7	+,-	RUNDC3B,ABCB1	-69561,15309
chr14:95235538-95235795	chr14	+	95235699	95235844	True	NR_015340,NM_173849	chr14,chr14	+,-	SERPINA13,GSC	-128688,705
chr12:113237551-113237841	chr12	+	113237555	113237729	True	NM_014954,NM_001143854,NM_001193521	chr12,chr12,chr12	+,+,-	RPH3A,RPH3A,RASAL1	-8057,-8057,335880
chr9:90343558-90343958	chr9	+	90343561	90343823	True	NM_001039803,NM_145918,NM_001912	chr9,chr9,chr9	-,+,+	CDK20,CTSL1,CTSL1	245928,-2638,-2638
chr13:53317604-53319234	chr13	+	53317821	53319253	True	NR_031582,NM_007015,NM_001011705	chr13,chr13,chr13	+,-,-	MIR759,LECT1,LECT1	64931,-3874,-3874
chr2:196529670-196531273	chr2	+	196530474	196531227	True	NM_020342,NM_001127257,NM_018897	chr2,chr2,chr2	+,+,-	SLC39A10,SLC39A10,DNAH7	-8689,-9009,402366
chr3:187567326-187567971	chr3	+	187567372	187567960	True	NR_034062,NM_001706	chr3,chr3	+,-	LOC100131635,BCL6	-147276,-103859
chr1:24743845-24744071	chr1	+	24743853	24744125	True	NM_020448,NM_001199013,NM_001199012,NM_001199014,NM_178122	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	NIPAL3,C1orf201,C1orf201,C1orf201,C1orf201	-1670,-3591,-2266,-3591,-3591
chr12:32906867-32907739	chr12	+	32906899	32907628	True	NM_001040436,NM_012063	chr12,chr12	-,+	YARS2,DNM1L	1310,-74814
chr16:3330728-3331086	chr16	+	3330777	3330911	True	NM_005741,NM_001198536	chr16,chr16	+,-	ZNF263,MEFV	2575,-24150
chr15:52484855-52485232	chr15	+	52484857	52485239	True	NM_016194,NM_002748	chr15,chr15	-,+	GNB5,MAPK6	-1292,-173500
chr15:25112814-25114022	chr15	+	25112896	25113910	True	NM_022805,NM_130838	chr15,chr15	+,-	SNRPN,UBE3A	-11264,536800
chr6:26094650-26095437	chr6	+	26094680	26095343	True	NM_139008,NM_139009,NM_005323,NM_000410,NM_139003,NM_139004,NM_003542,NM_139006,NM_139007,NM_139011,NM_139010	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	+,+,-,+,+,+,+,+,+,+,+	HFE,HFE,HIST1H1T,HFE,HFE,HFE,HIST1H4C,HFE,HFE,HFE,HFE	-7222,-7222,13072,-7222,-7222,-7222,8832,-7222,-7222,-7222,-7222
chr6:167368401-167369199	chr6	+	167368496	167369068	True	NM_003730,NM_007045	chr6,chr6	-,+	RNASET2,FGFR1OP	1059,43747
chr19:1648680-1648943	chr19	+	1648709	1648911	True	NM_003200,NM_001136139,NM_001080488	chr19,chr19,chr19	-,-,+	TCF3,TCF3,ONECUT3	3465,1425,104750
chr1:109618751-109619153	chr1	+	109618797	109619063	True	NM_020141,NM_005645	chr1,chr1	+,-	TMEM167B,TAF13	14339,-173
chr15:31197600-31197974	chr15	+	31197628	31198018	True	NM_017762,NM_014967,NM_001146095,NM_001146094,NM_001146096	chr15,chr15,chr15,chr15,chr15	-,+,+,+,+	MTMR10,FAN1,FAN1,FAN1,FAN1	85839,-1617,-1638,-1617,-1617
chr2:80530324-80530542	chr2	+	80530330	80530540	True	NM_004389,NM_178839	chr2,chr2	+,-	CTNNA2,LRRTM1	-790321,997
chr1:155531920-155532540	chr1	+	155531927	155532583	True	NR_027023,NM_018489	chr1,chr1	+,-	LOC645676,ASH1L	-206,-29
chr2:70997459-70997702	chr2	+	70997636	70997701	True	NM_017482,NM_001617,NM_017488,NM_001185054,NM_001185055,NM_012476	chr2,chr2,chr2,chr2,chr2,chr2	-,-,-,-,-,+	ADD2,ADD2,ADD2,ADD2,ADD2,VAX2	-2261,-2261,-2261,-2789,-2261,130018
chr7:6691633-6692179	chr7	+	6691746	6691994	True	NM_017560,NM_006956	chr7,chr7	+,-	ZNF853,ZNF12	-36270,54622
chr22:39409489-39410143	chr22	+	39409760	39410192	True	NM_014508,NM_175709,NM_152426	chr22,chr22,chr22	+,-,+	APOBEC3C,CBX7,APOBEC3D	72,138396,6925
chr10:50968998-50969459	chr10	+	50969016	50969466	True	NM_001143997,NM_001143996,NM_182554,NM_018245	chr10,chr10,chr10,chr10	-,-,+,-	OGDHL,OGDHL,C10orf53,OGDHL	1009,1009,-81383,1009
chr2:203130204-203130653	chr2	+	203130307	203130631	True	NM_003352,NM_015934	chr2,chr2	-,+	SUMO1,NOP58	-26985,1
chr8:109262577-109263048	chr8	+	109262586	109262960	True	NM_001568,NM_014673	chr8,chr8	-,+	EIF3E,TTC35	-1627,192892
chr22:19702507-19703655	chr22	+	19702869	19703673	True	NM_024627,NM_001009939,NM_002688,NR_037611,NR_037612,NM_000407	chr22,chr22,chr22,chr22,chr22,chr22	-,+,+,+,+,+	C22orf29,SEPT5,SEPT5,SEPT5-GP1BB,SEPT5-GP1BB,GP1BB	138748,2284,-933,1069,2318,7392
chr9:18477183-18478720	chr9	+	18477394	18478748	True	NM_153707,NM_001040272,NM_052866	chr9,chr9,chr9	-,+,+	FAM154A,ADAMTSL1,ADAMTSL1	554558,-3342,-3342
chr2:85919689-85920584	chr2	+	85919784	85920384	True	NM_198843,NM_012483,NM_006433	chr2,chr2,chr2	-,+,+	SFTPB,GNLY,GNLY	-23920,1029,1029
chr15:41522440-41522846	chr15	+	41522660	41522868	True	NM_007236,NM_152596	chr15,chr15	+,-	CHP,EXD1	568,77
chr11:4657267-4658781	chr11	+	4657480	4658806	True	NM_018073,NM_152430,NM_001004751	chr11,chr11,chr11	-,+,+	TRIM68,OR51E1,OR51D1	-28043,6349,2138
chr14:50862240-50862758	chr14	+	50862399	50862635	True	NR_033761,NM_004196	chr14,chr14	+,-	ATP5S,CDKL1	-83407,40
chr11:101976837-101977616	chr11	+	101977137	101977438	True	NM_001195045,NM_001195044,NM_001130145,NM_006106,NM_178127	chr11,chr11,chr11,chr11,chr11	+,+,+,+,-	YAP1,YAP1,YAP1,YAP1,ANGPTL5	5732,3753,3753,3753,-189884
chr4:124313869-124315124	chr4	+	124314262	124315178	True	NM_198041,NM_199327,NM_005841	chr4,chr4,chr4	-,+,+	NUDT6,SPRY1,SPRY1	-470139,2777,5504
chr12:27100608-27102602	chr12	+	27100994	27102467	True	NM_001171887,NM_001171888,NM_018164,NM_015633	chr12,chr12,chr12,chr12	+,+,-,+	FGFR1OP2,FGFR1OP2,C12orf11,FGFR1OP2	-9747,-9747,-9740,-9747
chr16:56711449-56711980	chr16	+	56711652	56711940	True	NM_005952,NM_005950,NR_003669,NM_005951	chr16,chr16,chr16,chr16	+,-,+,+	MT1X,MT1G,MT1IP,MT1H	4441,-9675,-2059,-7982
chr17:57695370-57696056	chr17	+	57695496	57696090	True	NM_004859,NM_016077	chr17,chr17	+,-	CLTC,PTRH2	959,88816
chr4:26322364-26322693	chr4	+	26322403	26322721	True	NM_203284,NM_015874,NM_203283,NM_005349,NM_000730	chr4,chr4,chr4,chr4,chr4	+,+,+,+,-	RBPJ,RBPJ,RBPJ,RBPJ,CCKAR	-6,-6,-1122,-1122,169371
chr10:101767193-101768955	chr10	+	101767322	101769004	True	NM_015221,NR_024130	chr10,chr10	-,+	DNMBP,DNMBP-AS1	722,-80407
chr1:16345567-16346315	chr1	+	16345711	16346347	True	NM_014424,NM_004070,NM_001042704	chr1,chr1,chr1	-,+,+	HSPB7,CLCNKA,CLCNKA	-426,2138,2138
chr1:46663494-46663931	chr1	+	46663498	46663806	True	NM_001013615,NM_017739	chr1,chr1	+,-	C1orf190,POMGNT1	5199,365
chrX:107076804-107078746	chrX	+	107076894	107078762	True	NM_052817,NM_198057,NM_012216	chrX,chrX,chrX	+,-,+	MID2,TSC22D3,MID2	-7868,-57877,-7868
chr10:6443281-6444146	chr10	+	6443415	6444024	True	NR_036502,NM_006257	chr10,chr10	+,-	LOC439949,PRKCQ	178362,178264
chr10:131932430-131933642	chr10	+	131932620	131933522	True	NM_006541,NM_001199868,NR_034125	chr10,chr10,chr10	+,+,-	GLRX3,GLRX3,LOC387723	1116,1116,-23539
chr16:28833355-28833870	chr16	+	28833389	28833835	True	NM_007245,NM_003321,NM_145714,NM_148416,NM_148415,NM_148414	chr16,chr16,chr16,chr16,chr16,chr16	+,-,+,+,+,+	ATXN2L,TUFM,ATXN2L,ATXN2L,ATXN2L,ATXN2L	578,23944,578,578,578,578
chr3:127308176-127308394	chr3	+	127308200	127308270	True	NM_004526,NM_016372,NM_001136053,NM_001142646	chr3,chr3,chr3,chr3	+,-,-,-	MCM2,TPRA1,TPRA1,TPRA1	8982,-8920,1276,1348
chr11:107987146-107988242	chr11	+	107987289	107987844	True	NM_000019,NM_002519	chr11,chr11	+,-	ACAT1,NPAT	4413,105572
chr19:12594510-12595231	chr19	+	12594597	12595073	True	NM_152601,NM_153358	chr19,chr19	-,+	ZNF709,ZNF791	609,126658
chr2:173963984-173965606	chr2	+	173964446	173965649	True	NR_033882,NM_016653	chr2,chr2	-,+	LOC339751,ZAK	181174,-23940
chr17:26903467-26903725	chr17	+	26903538	26903746	True	NM_003593,NM_005165,NM_033198	chr17,chr17,chr17	+,-,-	FOXN1,ALDOC,PIGS	-52630,255,-4651
chr17:26903467-26903725	chr17	-	26908427	26908635	False	NM_003593,NM_005165,NM_033198	chr17,chr17,chr17	+,-,-	FOXN1,ALDOC,PIGS	-57519,-4476,-9540
chr11:6484289-6486108	chr11	+	6484681	6485896	True	NM_012192,NM_006458,NM_033278	chr11,chr11,chr11	+,-,-	FXC1,TRIM3,TRIM3	16780,9368,9368
chr19:12268980-12269470	chr19	+	12269108	12269444	True	NM_003437,NR_037801,NR_037802,NM_145233	chr19,chr19,chr19,chr19	+,-,-,-	ZNF136,ZNF625,ZNF625-ZNF20,ZNF625	4427,-1562,-1562,-1562
chr21:43351349-43352333	chr21	+	43351416	43352283	True	NM_199050,NR_027273	chr21,chr21	-,+	C2CD2,C21orf121	-4617,89829
chr3:180317767-180318140	chr3	+	180317777	180318157	True	NM_001042601,NM_133462,NM_181426	chr3,chr3,chr3	+,+,-	TTC14,TTC14,CCDC39	1760,1760,79176
chr11:16760587-16761111	chr11	+	16760622	16761014	True	NM_014267,NM_033326	chr11,chr11	+,-	C11orf58,SOX6	-525,-262687
chr11:63331819-63332210	chr11	+	63331984	63332244	True	NM_017878,NM_004585	chr11,chr11	-,+	HRASLS2,RARRES3	-1129,-27762
chr22:30118005-30118758	chr22	+	30118014	30118802	True	NM_001003692,NM_182527	chr22,chr22	-,+	ZMAT5,CABP7	44217,-1721
chr20:4615807-4616740	chr20	+	4615896	4616579	True	NR_024267,NM_000311	chr20,chr20	-,+	PRNT,PRNP	104786,50217
chr22:50747226-50747910	chr22	+	50747317	50747739	True	NM_012401,NM_014678	chr22,chr22	-,+	PLXNB2,PPP6R2	-1315,34020
chr21:46073370-46074035	chr21	+	46073373	46073980	True	NM_198697,NM_198698,NM_198692	chr21,chr21,chr21	+,-,+	KRTAP12-3,KRTAP12-4,KRTAP10-11	3868,646,-7099
chr11:56153936-56154182	chr11	+	56153936	56154079	True	NM_001004744,NM_001013356	chr11,chr11	-,+	OR5R1,OR8U8	31686,-10888
chr2:159652902-159653277	chr2	+	159652923	159653295	True	NM_001171637,NM_001017920	chr2,chr2	-,+	CCDC148,DAPL1	-339658,-1153
chr6:39902346-39903197	chr6	+	39902408	39903236	True	NM_001075098,NR_033233,NM_005943,NM_015345	chr6,chr6,chr6,chr6	-,-,-,+	MOCS1,MOCS1,MOCS1,DAAM2	-118,-118,-6953,-141686
chr12:54378005-54378295	chr12	+	54378036	54378190	True	NR_029617,NR_003716,NM_017409	chr12,chr12,chr12	+,-,+	MIR196A2,HOTAIR,HOXC10	7331,-15521,755
chr1:40029351-40029579	chr1	+	40029384	40029612	True	NR_003929,NM_181809,NR_002983	chr1,chr1,chr1	-,+,-	PPIEL,BMP8A,SNORA55	-4014,-72117,3620
chr5:140812165-140812531	chr5	+	140812361	140812559	True	NM_005642,NR_001297,NM_032094,NM_003735	chr5,chr5,chr5,chr5	-,+,+,+	TAF7,PCDHGB8P,PCDHGA12,PCDHGA12	-112010,-6559,-2254,-2254
chr5:140812165-140812531	chr5	+	140794789	140794839	False	NM_032091,NM_032090,NM_032101,NM_032092,NM_005642,NM_018927,NM_018926,NM_032100,NM_018914,NM_018913	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,-,+,+,+,+,+	PCDHGA11,PCDHGA10,PCDHGB7,PCDHGA11,TAF7,PCDHGB7,PCDHGB6,PCDHGB6,PCDHGA11,PCDHGA10	5697,-2097,2374,5697,-94438,2420,-7070,-7070,5697,-2097
chr1:32690362-32691343	chr1	+	32690972	32691046	True	NM_003757,NM_019118	chr1,chr1	+,-	EIF3I,TMEM234	-3055,-3046
chr16:53680450-53681871	chr16	+	53680506	53681719	True	NM_001080432,NM_001127897	chr16,chr16	+,-	FTO,RPGRIP1L	56155,56114
chr12:19410438-19411589	chr12	+	19410565	19411245	True	NM_019012,NM_033123	chr12,chr12	+,-	PLEKHA5,PLCZ1	-127990,-519647
chr19:4640073-4640844	chr19	+	4640142	4640830	True	NM_001167942,NM_152362,NM_019107	chr19,chr19,chr19	+,+,-	TNFAIP8L1,TNFAIP8L1,C19orf10	-164,-666,29635
chr15:31926095-31926702	chr15	+	31926153	31926725	True	NM_015995,NM_130901	chr15,chr15	+,-	KLF13,OTUD7A	-307121,20867
chr16:29824806-29825617	chr16	+	29825148	29825610	True	NM_017458,NM_024516,NM_005115,NM_006319,NM_145239,NM_001042539,NM_002383	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,-,+,+,+	MVP,C16orf53,MVP,CDIPT,PRRT2,MAZ,MAZ	6104,1917,6104,49018,-1790,-7344,-7344
chr15:75120473-75121059	chr15	+	75120545	75121043	True	NM_001030005,NM_001099436	chr15,chr15	+,-	CPLX3,ULK3	-1645,14559
chr9:139246410-139247028	chr9	+	139246478	139246996	True	NM_001200003,NM_001145639,NM_001080849	chr9,chr9,chr9	+,+,-	GPSM1,GPSM1,DNLZ	2255,512,11295
chr1:45766989-45768443	chr1	+	45767407	45768245	True	NR_024270,NM_001048174	chr1,chr1	+,-	LOC400752,MUTYH	1336,37434
chr2:200775195-200775848	chr2	+	200775317	200775840	True	NM_001039693,NM_153689	chr2,chr2	-,+	C2orf60,C2orf69	44670,138
chr5:169400347-169400629	chr5	+	169400382	169400686	True	NM_012188,NM_001129891	chr5,chr5	+,-	FOXI1,FAM196B	132230,7116
chr2:107104336-107104577	chr2	+	107104555	107104625	True	NM_001144013,NR_003506	chr2,chr2	-,+	RGPD3,PLGLA	-19754,-101837
chr3:186558819-186559145	chr3	+	186558946	186559149	True	NM_004797,NM_181573,NM_001177800	chr3,chr3,chr3	+,-,+	ADIPOQ,RFC4,ADIPOQ	1313,-34462,1313
chr19:36211063-36211658	chr19	+	36211184	36211442	True	NM_014727,NM_024660,NM_014383	chr19,chr19,chr19	+,-,+	MLL4,IGFLR1,ZBTB32	-2316,21959,-7407
chr8:100904517-100905298	chr8	+	100904809	100905201	True	NM_004374,NM_005034	chr8,chr8	-,+	COX6C,POLR2K	1091,257637
chr10:97798503-97799646	chr10	+	97798539	97799669	True	NM_001134375,NM_019084,NR_036113,NM_001134376	chr10,chr10,chr10,chr10	+,+,-,+	CCNJ,CCNJ,MIR3157,CCNJ	3489,3489,24537,3489
chr4:1685623-1685886	chr4	+	1685743	1685925	True	NM_001013622,NM_001174070,NM_006342	chr4,chr4,chr4	-,-,+	FAM53A,FAM53A,TACC3	-25,113,37340
chr9:3524810-3525489	chr9	+	3524906	3525430	True	NM_134428,NM_002919,NR_026663	chr9,chr9,chr9	-,-,+	RFX3,RFX3,C9orf70	603,603,373215
chr6:99795452-99796230	chr6	+	99795548	99796252	True	NM_032511,NM_001195131	chr6,chr6	-,+	C6orf168,LOC100130890	1329,172617
chr2:43305808-43306473	chr2	+	43305835	43306445	True	NR_027251,NM_006887	chr2,chr2	+,-	LOC100129726,ZFP36L2	147904,147350
chr14:70263620-70263908	chr14	+	70263695	70263957	True	NM_003049,NM_006925	chr14,chr14	-,+	SLC10A1,SRSF5	99,-29912
chrX:44201977-44202756	chrX	+	44202207	44202805	True	NM_022076,NM_025184	chrX,chrX	+,-	DUSP21,EFHC2	500443,168
chr11:9603541-9604272	chr11	+	9603598	9604105	True	NR_036539,NM_003390,NM_001143976	chr11,chr11,chr11	-,+,+	LOC644656,WEE1,WEE1	-121353,-8429,-7423
chr1:109635920-109636478	chr1	+	109636162	109636485	True	NM_020141,NR_003023,NM_005645	chr1,chr1,chr1	+,+,-	TMEM167B,SCARNA2,TAF13	-2819,6329,-17538
chr11:84633009-84633395	chr11	+	84633009	84633446	True	NM_001364,NM_001193537	chr11,chr11	-,+	DLG2,TMEM126B	1071,706175
chr4:75231579-75233091	chr4	+	75231773	75233074	True	NM_001432,NM_002089	chr4,chr4	+,-	EREG,CXCL2	-965,-266776
chr3:100998512-100999647	chr3	+	100998526	100999370	True	NM_016247,NR_036433	chr3,chr3	-,+	IMPG2,FAM172B	40103,238345
chr7:766491-766733	chr7	+	766490	766736	True	NM_017802,NM_001164760,NM_001164758,NM_001164759	chr7,chr7,chr7,chr7	+,-,-,-	HEATR2,PRKAR1B,PRKAR1B,PRKAR1B	-203,292,627,627
chr11:17250845-17251111	chr11	+	17251086	17251160	True	NM_002645,NM_005013	chr11,chr11	-,+	PIK3C2A,NUCB2	-59732,47125
chr13:41710718-41712594	chr13	+	41710892	41712563	True	NM_007187,NM_152903	chr13,chr13	+,-	WBP4,KBTBD6	-75249,-3956
chr7:4901796-4902382	chr7	+	4901856	4902161	True	NM_020144,NM_014855	chr7,chr7	-,+	PAPOLB,KIAA0415	-231,-86645
chr1:9187681-9188300	chr1	+	9187696	9188232	True	NM_004285,NM_024980	chr1,chr1	+,-	H6PD,GPR157	106630,1047
chr5:173163632-173164007	chr5	+	173163637	173163967	True	NM_030627,NM_138369	chr5,chr5	+,-	CPEB4,BOD1	151363,-119971
chr6:170123140-170123452	chr6	+	170123218	170123484	True	NM_018288,NM_133325,NM_001029863	chr6,chr6,chr6	-,-,+	PHF10,PHF10,C6orf120	674,674,-21012
chr17:81009869-81010079	chr17	+	81010024	81010090	True	NM_001004431	chr17	+	METRNL	27476
chr22:50748085-50748669	chr22	+	50748119	50748575	True	NM_012401,NM_014678	chr22,chr22	-,+	PLXNB2,PPP6R2	-2117,33184
chr19:3971438-3971797	chr19	+	3971513	3971705	True	NM_015897,NM_001348	chr19,chr19	+,-	PIAS4,DAPK3	36043,-1687
chr3:51812950-51813995	chr3	+	51812957	51813819	True	NM_001085479,NM_001143833	chr3,chr3	+,-	IQCF3,IQCF6	48749,-14
chrX:153673441-153674091	chrX	+	153673486	153674036	True	NM_001009934,NM_004699,NM_001493	chrX,chrX,chrX	-,+,+	DNASE1L1,FAM50A,GDI1	-33059,-1052,-8278
chr20:62491290-62492213	chr20	+	62491727	62492205	True	NM_080622,NM_025224,NM_199359,NM_003288,NM_199363,NM_199362,NM_199361,NM_199360	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,-,+,+,+,+,+,+	ABHD16B,ZBTB46,TPD52L2,TPD52L2,TPD52L2,TPD52L2,TPD52L2,TPD52L2	360,-54871,4384,4384,4384,4384,4384,4384
chr3:191046767-191046978	chr3	+	191046790	191046932	True	NM_178335,NM_198152,NM_174908	chr3,chr3,chr3	+,-,+	CCDC50,UTS2D,CCDC50	9,1443,9
chr2:238702736-238704380	chr2	+	238703350	238704194	True	NM_001080504,NR_033308	chr2,chr2	+,-	RBM44,RAB17	3193,-203581
chr13:92076914-92078499	chr13	+	92076930	92077585	True	NR_027039,NM_004466	chr13,chr13	-,+	LOC144776,GPC5	-498079,-26053
chr4:48130380-48130672	chr4	+	48130419	48130583	True	NM_003328,NM_207330	chr4,chr4	-,+	TXK,NIPAL1	5746,-111679
chr1:22775604-22777203	chr1	+	22775792	22777181	True	NM_014870,NM_030761,NM_001083621	chr1,chr1,chr1	+,-,+	ZBTB40,WNT4,ZBTB40	1162,-306273,1162
chr2:132559570-132559883	chr22	+	16467273	16467331	False	NM_001005239,NR_001591	chr22,chr22	-,+	OR11H1,psiTPTE22	-17469,615469
chr2:132559570-132559883	chr2	+	132559603	132559815	True	NM_013310,NM_214461	chr2,chr2	+,-	C2orf27A,C2orf27B	-79590,-369
chr2:132559570-132559883	chr14	-	19360051	19360109	False	NM_001145442,NM_001013354	chr14,chr14	-,+	POTEM,OR11H12	660213,17484
chr1:1446171-1446602	chr1	+	1446230	1446602	True	NM_001170536,NM_001170535,NM_018188,NM_001114748	chr1,chr1,chr1,chr1	+,+,+,-	ATAD3A,ATAD3A,ATAD3A,C1orf70	1307,920,920,29188
chr6:26020846-26021288	chr6	+	26020868	26021294	True	NM_005325,NM_003544,NM_003529,NM_003538	chr6,chr6,chr6,chr6	-,-,+,+	HIST1H1A,HIST1H4B,HIST1H3A,HIST1H4A	-2828,6236,-203,612
chr10:25013156-25013538	chr10	+	25013203	25013493	True	NM_020824,NM_024838	chr10,chr10	-,+	ARHGAP21,THNSL1	-606,292014
chrX:152484469-152485102	chrX	+	152484500	152485130	True	NM_001080485,NM_004988	chrX,chrX	+,-	ZNF275,MAGEA1	114482,1036
chr4:110224327-110225913	chr4	+	110224332	110225795	True	NM_032518,NM_198721,NM_001042734	chr4,chr4,chr4	-,-,+	COL25A1,COL25A1,SEC24B	-533,-533,129175
chr10:99052334-99052616	chr10	+	99052429	99052665	True	NR_037909,NM_005479,NM_032900,NM_001204300	chr10,chr10,chr10,chr10	-,+,-,-	ARHGAP19-SLIT1,FRAT1,ARHGAP19,ARHGAP19	1,26356,1,1
chr11:57796865-57797601	chr11	+	57796919	57797294	True	NM_001005211,NM_001005186,NM_001005212	chr11,chr11,chr11	-,+,+	OR9I1,OR6Q1,OR9Q1	89673,1130,-5617
chr22:17072811-17073041	chr22	+	17072829	17073079	True	NM_014406,NR_001591	chr22,chr22	-,+	CCT8L2,psiTPTE22	671,9721
chr2:14774026-14774277	chr2	+	14774078	14774271	True	NM_015909,NM_145175	chr2,chr2	-,+	NBAS,FAM84A	927233,-1319
chr6:160115450-160115718	chr6	+	160115452	160115570	True	NM_001024466,NM_001024465,NM_152858,NM_000636	chr6,chr6,chr6,chr6	-,-,+,-	SOD2,SOD2,WTAP,SOD2	-1099,-1099,32581,-1099
chr18:12419895-12420155	chr18	+	12420107	12420203	True	NM_006796,NM_006553	chr18,chr18	-,+	AFG3L2,SLMO1	-42832,-12263
chr7:156931457-156931679	chr7	+	156931457	156931699	True	NM_005515,NM_014671	chr7,chr7	-,+	MNX1,UBE3C	-128110,3
chr11:109957833-109959296	chr11	+	109957929	109959263	True	NM_033390,NM_002906	chr11,chr11	+,-	ZC3H12C,RDX	4823,208224
chr11:112119273-112120535	chr11	+	112119431	112120289	True	NM_000317,NM_001145024	chr11,chr11	+,-	PTS,C11orf34	-22394,11351
chr8:9761669-9762098	chr8	+	9761828	9762096	True	NR_024281,NM_001135670,NR_029668	chr8,chr8,chr8	-,+,-	LOC157627,MSRA,MIR124-1	-989,149733,-846
chr8:29209095-29209597	chr8	+	29209180	29209598	True	NM_057158,NM_001394,NM_024567	chr8,chr8,chr8	-,-,+	DUSP4,DUSP4,HMBOX1	-2858,-913,-461006
chr8:26437251-26438496	chr8	+	26437323	26438561	True	NM_001386,NM_007257	chr8,chr8	+,-	DPYSL2,PNMA2	-1960,-65840
chr1:201798564-201799267	chr1	+	201798620	201799288	True	NM_012134,NM_018085	chr1,chr1	-,+	LMOD1,IPO9	116478,-383
chr7:144048612-144050392	chr7	+	144048777	144049905	True	NM_005435,NM_001080413	chr7,chr7	+,-	ARHGEF5,NOBOX	2583,50931
chr7:144048612-144050392	chr7	-	143895275	143896403	False	NM_001003702,NM_198495	chr7,chr7	-,+	ARHGEF35,CTAGE4	-2484,-14778
chr11:114174637-114175011	chr11	+	114174765	114175034	True	NM_019021,NM_006169	chr11,chr11	-,+	C11orf71,NNMT	96162,-8296
chr17:4805984-4806451	chr17	+	4805997	4806236	True	NM_000080,NM_001145536	chr17,chr17	-,+	CHRNE,C17orf107	184,-3100
chr2:12856076-12856715	chr2	+	12856082	12856549	True	NR_027303,NM_021643,NR_036226	chr2,chr2,chr2	+,+,-	TRIB2,TRIB2,MIR4262	448,448,-878970
chr7:2273531-2274044	chr7	+	2273723	2274099	True	NM_003550,NM_198954,NM_002452,NM_198952,NM_198950,NM_013393,NM_001013836,NM_001013837,NM_198948,NM_198949,NM_198953	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,+,-,-,-,+,+,+	MAD1L1,NUDT1,NUDT1,NUDT1,NUDT1,FTSJ2,MAD1L1,MAD1L1,NUDT1,NUDT1,NUDT1	-1140,8440,7757,7796,7796,7791,-1140,-1140,7757,7757,8440
chr17:27891726-27892504	chr17	+	27891798	27891874	True	NM_138349,NM_198147	chr17,chr17	+,-	TP53I13,ABHD15	3864,2218
chr5:78377008-78378133	chr5	+	78377123	78378089	True	NM_017614,NM_013391	chr5,chr5	+,-	BHMT2,DMGDH	-11627,-11674
chr17:39594454-39595068	chr17	+	39594531	39595081	True	NM_030975,NM_006771	chr17,chr17	+,-	KRTAP9-9,KRT38	-182946,2565
chr22:29225154-29226203	chr22	+	29225197	29226065	True	NM_005080,NM_032173	chr22,chr22	-,+	XBP1,ZNRF3	-28637,53824
chr5:154129988-154130398	chr5	+	154130118	154130178	True	NM_015315,NM_032385	chr5,chr5	+,-	LARP1,C5orf4	-37710,100085
chr3:27673348-27674234	chr3	+	27673762	27674222	True	NM_005442,NM_182523	chr3,chr3	-,+	EOMES,CMC1	89613,608901
chr6:36207571-36208813	chr6	+	36207578	36208829	True	NM_001010903,NM_001145716,NM_173676	chr6,chr6,chr6	-,+,+	C6orf222,PNPLA1,PNPLA1	95892,2150,2115
chrX:100665750-100666696	chrX	+	100665761	100666749	True	NM_001032393,NM_019597,NM_000169,NR_028407	chrX,chrX,chrX,chrX	+,+,-,+	HNRNPH2,HNRNPH2,GLA,ARMCX4	-2700,-2700,-2760,6516
chr17:62502419-62502797	chr17	+	62502421	62502753	True	NM_138363,NM_007215,NM_004396	chr17,chr17,chr17	+,-,-	CCDC45,POLG2,DDX5	404,-9237,-23
chr2:220173648-220173966	chr2	+	220173680	220173964	True	NM_001199764,NM_001199763,NM_006736,NM_002846	chr2,chr2,chr2,chr2	-,-,+,-	PTPRN,PTPRN,DNAJB2,PTPRN	49,381,-29691,381
chr7:99031597-99032469	chr7	+	99031741	99032509	True	NM_015545,NM_006693,NM_001081559	chr7,chr7,chr7	-,+,+	PTCD1,CPSF4,CPSF4	4003,4053,4053
chr7:6617754-6618225	chr7	+	6618021	6618193	True	NM_001145118,NM_001134387,NM_001134388,NM_001134389,NM_018106	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	GRID2IP,ZDHHC4,ZDHHC4,ZDHHC4,ZDHHC4	-26954,-1007,-1007,-1007,-1007
chr3:121424908-121425303	chr3	+	121425029	121425310	True	NM_004487,NM_016298	chr3,chr3	-,+	GOLGB1,FBXO40	43349,-112916
chr8:67785052-67785976	chr8	+	67785254	67785828	True	NR_002598,NM_173518,NM_001136160,NM_001136161	chr8,chr8,chr8,chr8	-,+,+,+	SNORD87,C8orf45,C8orf45,C8orf45	49013,-2333,-1580,-2333
chr17:53502984-53503675	chr17	+	53503105	53503479	True	NM_002126,NM_012329	chr17,chr17	+,-	HLF,MMD	-160836,-3764
chr16:20334384-20335177	chr16	+	20334394	20335192	True	NM_017888,NM_001502,NM_001007240,NM_001007241,NM_001007242	chr16,chr16,chr16,chr16,chr16	+,-,-,-,-	ACSM5,GP2,GP2,GP2,GP2	85663,3693,3693,3693,3693
chr6:37012984-37014595	chr6	+	37013331	37014005	True	NM_173558,NM_014341	chr6,chr6	+,-	FGD2,MTCH1	-39959,-59382
chr6:28557881-28558111	chr6	+	28557984	28558154	True	NM_052923,NM_003996	chr6,chr6	-,+	SCAND3,GPX5	-2872,-64246
chr6:28557881-28558111	chr6_cox_hap2	+	80188	80358	False	NM_052923,NM_003996	chr6_cox_hap2,chr6_cox_hap2	-,+	SCAND3,GPX5	-2872,-64246
chr22:25385786-25387077	chr22	+	25385878	25386911	True	NM_001001663,NM_001145206	chr22,chr22	-,+	TMEM211,KIAA1671	-50564,37029
chr4:146540648-146540911	chr4	+	146540746	146540958	True	NM_178835,NM_172250	chr4,chr4	-,+	ZNF827,MMAA	318699,-257
chr19:39280219-39281138	chr19	+	39280365	39281077	True	NM_002307,NM_001042507	chr19,chr19	-,+	LGALS7,LGALS7B	-16208,-566
chr19:39280219-39281138	chr19	-	39263081	39263633	False	NM_002307,NM_001042507	chr19,chr19	-,+	LGALS7,LGALS7B	574,16216
chr4:90173724-90174298	chr4	+	90173761	90174259	True	NM_145715,NM_198281	chr4,chr4	+,-	TIGD2,GPRIN3	-139858,54961
chr7:4900823-4901398	chr7	+	4900868	4901156	True	NM_020144,NM_014855	chr7,chr7	-,+	PAPOLB,KIAA0415	525,-85669
chr4:1342392-1342776	chr4	+	1342462	1342772	True	NM_001328,NM_020894	chr4,chr4	-,+	CTBP1,KIAA1530	-99554,-1413
chr4:71703858-71704625	chr4	+	71704048	71704627	True	NM_001098477,NM_173468,NM_002092	chr4,chr4,chr4	-,+,-	GRSF1,MOBKL1A,GRSF1	643,63436,1050
chr4:186578138-186578599	chr4	+	186578163	186578529	True	NM_001114357,NM_001145674,NM_001145675	chr4,chr4,chr4	+,-,-	C4orf47,SORBS2,SORBS2	-227681,-40,-40
chr4:174452064-174452399	chr4	+	174452063	174452423	True	NR_003679,NM_021973	chr4,chr4	+,-	NBLA00301,HAND2	-505,-685
chr9:103192766-103193375	chr9	+	103192796	103193224	True	NM_080655,NM_001198805,NM_017746,NM_001198807,NM_001198806	chr9,chr9,chr9,chr9,chr9	+,+,-,+,+	C9orf30,C9orf30,TEX10,C9orf30,C9orf30	-3352,-3136,-77537,-3352,-1051
chr20:32255337-32255609	chr20	+	32255393	32255657	True	NM_080825,NM_031231,NM_031232,NM_001024675	chr20,chr20,chr20,chr20	+,-,-,+	C20orf144,NECAB3,NECAB3,C20orf134	-5352,6657,6657,-1140
chr7:100075059-100075302	chr7	+	100075091	100075303	True	NM_030935,NM_173564	chr7,chr7	-,+	TSC22D4,C7orf51	1649,6246
chr11:62561811-62562438	chr11	+	62561846	62562476	True	NM_199337,NM_001080501	chr11,chr11	+,-	TMEM179B,TMEM223	-7023,-2360
chr11:82988684-82990046	chr11	+	82988828	82989812	True	NM_182603,NM_021825	chr11,chr11	+,-	ANKRD42,CCDC90B	-83598,7628
chr16:16855952-16856653	chr16	+	16856086	16856658	True	NR_036447,NM_001079528	chr16,chr16	+,-	PKD1P1,ABCC6	-444679,-538758
chr16:16855952-16856653	chr16	-	18607750	18608324	False	NR_003569,NM_173614	chr16,chr16	+,-	ABCC6P1,NOMO2	-25231,-34316
chr5:180578764-180579598	chr5	+	180578768	180579639	True	NM_203297,NM_206880	chr5,chr5	-,+	TRIM7,OR2V2	48341,2303
chr16:3063745-3064886	chr16	+	3063760	3064930	True	NM_024339,NM_001142350,NM_017885,NM_001002017,NM_001002018,NM_021195,NM_020982,NM_016639	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,-,-,-,-,+,+	THOC6,THOC6,HCFC1R1,HCFC1R1,HCFC1R1,CLDN6,CLDN9,TNFRSF12A	9101,9101,9407,9407,9407,3308,-1354,5382
chr6:28325871-28327457	chr6	+	28326092	28327329	True	NM_024493,NM_145909,NM_001135215	chr6,chr6,chr6	+,-,-	ZKSCAN3,ZNF323,ZNF323	-8452,-4120,-2044
chr22:18630301-18630713	chr22	+	18630477	18630741	True	NM_001136004,NM_017414	chr22,chr22	-,+	MICAL3,USP18	-123152,2016
chrX:154563716-154564668	chrX	+	154563827	154564593	True	NM_001017990,NM_001289	chrX,chrX	+,-	H2AFB1,CLIC2	45834,85
chrX:152712679-152712912	chrX	+	152712702	152712794	True	NM_080701,NM_001136273	chrX,chrX	-,+	TREX2,ZFP92	-757,-28972
chr8:145668754-145669109	chr8	+	145668757	145669079	True	NM_145754,NM_013432	chr8,chr8	+,-	KIFC2,TONSL	22658,783
chr17:17484155-17485083	chr17	+	17484228	17485120	True	NM_007169,NM_030665,NM_148172,NM_148173	chr17,chr17,chr17,chr17	-,+,-,-	PEMT,RAI1,PEMT,PEMT	675,99666,9924,-3449
chr8:71307629-71309610	chr8	+	71307719	71309078	True	NM_006540,NM_001011720	chr8,chr8	-,+	NCOA2,XKR9	6999,272521
chr4:185721880-185722596	chr4	+	185721906	185722606	True	NR_003542,NM_152683	chr4,chr4	-,+	SLED1,CCDC111	-1706,-151197
chr12:14926078-14926510	chr12	+	14926078	14926513	True	NM_177925,NR_027716,NM_175054	chr12,chr12,chr12	+,+,-	H2AFJ,H2AFJ,HIST4H4	756,756,-2013
chr3:9883871-9884666	chr3	+	9883908	9884532	True	NR_037162,NM_173659,NM_001142547	chr3,chr3,chr3	+,-,-	TTLL3,RPUSD3,RPUSD3	-32317,1220,1220
chr17:16473776-16474754	chr17	+	16474118	16474708	True	NM_014695,NM_020653	chr17,chr17	+,-	CCDC144A,ZNF287	118930,-1598
chr12:106694153-106695651	chr12	+	106694409	106695671	True	NM_006825,NM_152772	chr12,chr12	-,+	CKAP4,TCP11L2	-52696,909
chr3:57094648-57095959	chr3	+	57094780	57096003	True	NM_181727,NM_001128615	chr3,chr3	+,-	SPATA12,ARHGEF3	-362,17390
chr6:97656306-97657299	chr6	+	97656367	97657336	True	NM_052904,NM_198468	chr6,chr6	+,-	KLHL32,MMS22L	-283922,73774
chr19:51069962-51070668	chr19	+	51069967	51070355	True	NR_004384,NM_001080457	chr19,chr19	+,-	SNAR-F,LRRC4B	37864,997
chr8:130777497-130777996	chr8	+	130777525	130777987	True	NM_031415,NR_031613	chr8,chr8	-,+	GSDMC,MIR1208	21197,-1615227
chr16:27216505-27216882	chr16	+	27216504	27216842	True	NM_024773,NM_145080,NM_001145348	chr16,chr16,chr16	+,-,+	JMJD5,NSMCE1,JMJD5	-1751,63321,-1262
chr9:135039027-135039366	chr9	+	135039148	135039390	True	NM_032536,NM_004269	chr9,chr9	+,-	NTNG2,MED27	-1866,-83895
chr19:42078821-42079083	chr19	+	42078884	42079102	True	NM_001098506,NM_033543,NM_001817	chr19,chr19,chr19	+,+,-	CEACAM21,CEACAM21,CEACAM4	3428,3428,54390
chr5:135464238-135464705	chr5	+	135464308	135464631	True	NM_001001420,NR_026763,NM_005903,NM_001001419	chr5,chr5,chr5,chr5	+,-,+,+	SMAD5,SMAD5OS,SMAD5,SMAD5	3904,5999,3904,3904
chr14:70883540-70883798	chr14	+	70883594	70883812	True	NM_001202548,NM_001202549,NM_001202547,NM_003813,NM_018373	chr14,chr14,chr14,chr14,chr14	-,-,-,+,-	SYNJ2BP-COX16,SYNJ2BP-COX16,SYNJ2BP-COX16,ADAM21,SYNJ2BP	45,45,45,40404,45
chr10:37414048-37414315	chr10	+	37414087	37414335	True	NM_052997,NM_001190489	chr10,chr10	+,-	ANKRD30A,MTRNR2L7	449,477574
chr20:35234334-35234559	chr20	+	35234411	35234577	True	NM_199483,NM_001199534,NM_032214,NM_018840,NR_026562	chr20,chr20,chr20,chr20,chr20	+,+,-,+,+	C20orf24,C20orf24,SLA2,C20orf24,C20orf24	-325,-325,40031,-325,-325
chr16:4606071-4606834	chr16	+	4606125	4606769	True	NM_001145011,NM_013399	chr16,chr16	+,-	LOC342346,C16orf5	53,-17309
chr3:183994340-183994566	chr3	+	183994476	183994550	True	NM_033259,NM_001100121,NM_001100120,NM_001037324	chr3,chr3,chr3,chr3	-,+,+,+	CAMK2N2,ECE2,ECE2,ECE2	-15225,-728,-728,-728
chr3:124777965-124778872	chr3	+	124778089	124778921	True	NM_020733,NR_033437	chr3,chr3	-,+	HEG1,UMPS	-3287,-328927
chr14:73925620-73926306	chr14	+	73925676	73926355	True	NM_003744,NM_001005745,NM_001005744,NM_001005743,NM_024644	chr14,chr14,chr14,chr14,chr14	-,-,-,-,+	NUMB,NUMB,NUMB,NUMB,C14orf169	-390,-390,-390,-390,31288
chr3:155574976-155576490	chr3	+	155575160	155576122	True	NM_001190992,NM_004733,NM_003875	chr3,chr3,chr3	-,-,+	SLC33A1,SLC33A1,GMPS	-2912,-2912,12202
chr16:28636655-28637289	chr16	+	28636772	28637146	True	NM_001199142,NM_177536	chr16,chr16	+,-	EIF3C,SULT1A1	62732,-1906
chr19:36388881-36389352	chr19	+	36388964	36389398	True	NM_001007469,NM_003332,NM_001173514,NM_001173515,NR_033390,NM_198125,NM_139239,NM_014266	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,-,-,-,-,-,+	HCST,TYROBP,TYROBP,TYROBP,TYROBP,TYROBP,NFKBID,HCST	3983,9863,9863,9863,9863,9863,2204,3983
chr7:100035501-100036397	chr7	+	100035655	100036121	True	NM_001194992,NM_001194991,NM_001194990,NM_019606,NM_017984,NM_145030	chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,-,-	MEPCE,MEPCE,MEPCE,MEPCE,ZCWPW1,C7orf47	-9293,-9293,-9293,-8452,-9353,-1561
chr13:53021894-53023143	chr13	+	53022066	53023029	True	NM_001098525,NM_018204,NM_016075	chr13,chr13,chr13	+,+,-	CKAP2,CKAP2,VPS36	6465,6465,1784
chr1:52201338-52201812	chr1	+	52201337	52201851	True	NR_031580,NM_148905,NM_148904,NM_148907	chr1,chr1,chr1,chr1	-,+,+,+	MIR761,OSBPL9,OSBPL9,OSBPL9	100275,-5909,-5909,-5909
chr16:29757090-29757342	chr16	+	29757134	29757374	True	NM_175900,NM_152338	chr16,chr16	-,+	C16orf54,ZG16	16,32186
chr6:44307487-44308730	chr6	+	44307487	44308636	True	NM_145026,NM_020745	chr6,chr6	+,-	SPATS1,AARS2	1760,-26424
chr15:44578707-44579228	chr15	+	44578840	44579277	True	NM_032892,NM_177974,NM_138423	chr15,chr15,chr15	-,+,+	FRMD5,CASC4,CASC4	-91411,1631,1631
chr15:71150865-71151101	chr15	+	71150961	71151149	True	NM_018357,NM_001199017,NM_197958	chr15,chr15,chr15	-,+,-	LARP6,LRRC49,LARP6	-4463,33778,-4463
chr1:151016754-151017666	chr1	+	151016797	151017438	True	NM_138278,NM_017860,NM_001159642,NM_001038707	chr1,chr1,chr1,chr1	+,+,+,-	BNIPL,C1orf56,BNIPL,CDC42SE1	-7826,2820,-7826,14737
chr6:31804576-31805327	chr6_qbl_hap6	+	3098385	3099011	False	NM_001040437,NR_002745,NM_005527,NR_002742,NM_005346,NM_001040438	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,SNORD52,HSPA1B,C6orf48	-2091,-1744,-21903,-9,-9280,-2091
chr6:31804576-31805327	chr6_dbb_hap3	+	3090315	3090941	False	NM_001040437,NR_002745,NM_005527,NR_002742,NM_005346,NM_001040438	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,SNORD52,HSPA1B,C6orf48	-2093,-1746,-21893,-9,-9274,-2093
chr6:31804576-31805327	chr6	+	31804729	31805355	True	NM_001040437,NR_002745,NM_005527,NR_002742,NM_005346,NM_001040438	chr6,chr6,chr6,chr6,chr6,chr6	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,SNORD52,HSPA1B,C6orf48	-2094,-1747,-21894,-9,-9275,-2094
chr6:31804576-31805327	chr6_apd_hap1	+	3119484	3120110	False	NM_001040437,NR_002745,NM_005527,NR_002742,NM_005346,NM_001040438	chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,SNORD52,HSPA1B,C6orf48	-2095,-1748,-21888,-9,-9266,-2095
chr6:31804576-31805327	chr6_cox_hap2	+	3314303	3314929	False	NM_001040437,NR_002745,NM_005527,NR_002742,NM_005346,NM_001040438	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,SNORD52,HSPA1B,C6orf48	-2092,-1745,-21888,-9,-9267,-2092
chr10:31982393-31983469	chr10	+	31982392	31983466	True	NM_001174094,NM_018287	chr10,chr10	+,-	ZEB1,ARHGAP12	-372379,234354
chr4:187474756-187475070	chr4	+	187474958	187475104	True	NM_000128,NM_005958	chr4,chr4	+,-	F11,MTNR1A	-287892,1483
chr1:213123518-213123820	chr1	+	213123522	213123762	True	NM_001136474,NM_001136475,NM_144567,NM_024749	chr1,chr1,chr1,chr1	+,+,-,+	VASH2,VASH2,ANGEL2,VASH2	124,124,65456,124
chr16:75240855-75241073	chr16	+	75240856	75241034	True	NM_001025200,NM_001906	chr16,chr16	-,+	CTRB2,CTRB1	88,11849
chr5:61699802-61700091	chr5	+	61699927	61700047	True	NM_014473,NM_016338	chr5,chr5	-,+	DIMT1L,IPO11	-199,8525
chr19:50093957-50094263	chr19	+	50094116	50094298	True	NM_000951,NM_015953,NM_020719	chr19,chr19,chr19	+,-,+	PRRG2,NOSIP,PRR12	-9580,-10313,613
chrX:147088899-147090557	chrX	+	147089218	147090224	True	NM_152578,NR_024503	chrX,chrX	+,-	FMR1NB,FMR1-AS1	-26440,-85542
chr8:136470325-136470902	chr8	+	136470562	136470944	True	NR_029599,NM_006558	chr8,chr8	-,+	MIR30D,KHDRBS3	-653374,-897
chr19:11786321-11787733	chr19	+	11786417	11786639	True	NR_028594,NM_001080493	chr19,chr19	+,-	ZNF833P,ZNF823	-1662,63171
chr8:145017700-145018103	chr8	+	145017709	145018127	True	NM_000837,NR_030383,NM_201384,NM_201381,NM_201380,NM_201383,NM_201382	chr8,chr8,chr8,chr8,chr8,chr8,chr8	+,-,-,-,-,-,-	GRINA,MIR661,PLEC,PLEC,PLEC,PLEC,PLEC	46098,1370,-3951,828,6967,-1017,33
chr17:11499275-11500991	chr17	+	11499331	11500773	True	NM_144680,NM_001372	chr17,chr17	-,+	ZNF18,DNAH9	399967,974
chr18:32556254-32556687	chr18	+	32556266	32556600	True	NM_001143827,NM_001143826,NM_001112734	chr18,chr18,chr18	+,+,-	MAPRE2,MAPRE2,ZSCAN30	1607,291,313646
chr1:151816349-151816835	chr1	+	151816594	151816872	True	NR_024237,NM_182578,NM_001136003	chr1,chr1,chr1	+,-,-	LOC100132111,THEM5,C2CD4D	-5700,9351,-3561
chr10:127440747-127441903	chr10	+	127440795	127441919	True	NM_147191,NM_015608	chr10,chr10	-,+	MMP21,C10orf137	22521,-32769
chr19:37340122-37340994	chr19	+	37340174	37340927	True	NM_003419,NM_206894	chr19,chr19	+,-	ZNF345,ZNF790	339,-10890
chr13:97874531-97876326	chr13	+	97874617	97876338	True	NM_144778,NM_080818,NM_207304	chr13,chr13,chr13	+,-,+	MBNL2,OXGR1,MBNL2	-101,-228013,-101
chr17:62464699-62464921	chr17	+	62464702	62464832	True	NM_007215,NM_001085423	chr17,chr17	-,+	POLG2,C17orf60	28402,-3192
chr18:12884205-12884425	chr18	+	12884284	12884468	True	NM_001013437,NM_080423,NM_080422,NM_002828	chr18,chr18,chr18,chr18	+,-,-,-	SEH1L,PTPN2,PTPN2,PTPN2	63514,38,38,38
chr1:16300810-16301228	chr1	+	16300957	16301032	True	NM_003443,NM_178840	chr1,chr1	-,+	ZBTB17,C1orf64	1645,29698
chr3:23272132-23273291	chr3	+	23272311	23273233	True	NM_020345,NM_152653	chr3,chr3	-,+	NKIRAS1,UBE2E2	685354,-27579
chr16:2482510-2482940	chr16	+	2482514	2482908	True	NM_001761,NM_001089	chr16,chr16	+,-	CCNF,ABCA3	-3170,-91767
chr1:66497605-66498496	chr1	+	66497653	66498308	True	NM_005478,NM_001037340	chr1,chr1	-,+	INSL5,PDE4B	768695,-39321
chrX:150731662-150732208	chrX	+	150731804	150732029	True	NR_029973,NM_173493	chrX,chrX	-,+	MIR452,PASD1	396206,0
chr1:156469911-156470150	chr1	+	156469922	156470159	True	NM_001105669,NM_005920	chr1,chr1	+,-	TTC24,MEF2D	79359,420
chr1:67217541-67217789	chr1	+	67217644	67217824	True	NM_005478,NM_152665	chr1,chr1	-,+	INSL5,TCTEX1D1	49168,315
chr11:122712401-122713281	chr11	+	122712468	122712936	True	NM_019604,NM_001098169	chr11,chr11	+,-	CRTAM,BSX	-3272,139493
chr5:147771415-147772588	chr5	+	147771669	147772634	True	NM_205836,NM_030793,NM_001040169	chr5,chr5,chr5	+,+,-	FBXO38,FBXO38,HTR4	-8174,-8174,244046
chrX:54382902-54383904	chrX	+	54382981	54383695	True	NM_001002838,NM_020922,NM_058163	chrX,chrX,chrX	-,-,+	WNK3,WNK3,TSR2	793,793,83157
chr8:58926698-58927052	chr8	+	58926699	58927101	True	NM_000780,NM_147189	chr8,chr8	-,+	CYP7A1,FAM110B	485669,-19637
chrX:54981411-54982665	chrX	+	54981568	54982706	True	NM_002625,NM_177556	chrX,chrX	-,+	PFKFB1,TRO	37855,-34378
chr1:40372167-40372640	chr1	+	40372259	40372328	True	NM_001033081,NM_001033082,NM_005376,NM_001136493	chr1,chr1,chr1,chr1	-,-,-,+	MYCL1,MYCL1,MYCL1,MFSD2A	-4572,-4572,-4572,48455
chr8:24331318-24332917	chr8	+	24331736	24332900	True	NM_003817,NM_006158	chr8,chr8	+,-	ADAM7,NEFL	-33289,481293
chr17:40987265-40988112	chr17	+	40987372	40988001	True	NM_176863,NM_001158,NM_009590,NM_005789,NM_003766	chr17,chr17,chr17,chr17,chr17	+,+,+,+,-	PSME3,AOC2,AOC2,PSME3,BECN1	-2002,8607,8607,-2002,-11062
chr6:10753391-10753907	chr6	+	10753476	10753906	True	NM_030969,NR_026736,NM_001127711	chr6,chr6,chr6	+,-,+	TMEM14B,C6orf52,TMEM14B	-5533,-58446,-5533
chr10:119808242-119808608	chr10	+	119808269	119808649	True	NR_026940,NM_014904,NR_026941,NR_026939	chr10,chr10,chr10,chr10	+,-,+,+	CASC2,RAB11FIP2,CASC2,CASC2	-1999,-2155,-1999,-1999
chr9:98270154-98270487	chr9	+	98270233	98270523	True	NM_001010895,NM_000264,NM_001083602,NM_001083603,NM_001083604,NM_001083605,NM_001083606,NM_001083607	chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9	+,-,-,-,-,-,-,-	C9orf102,PTCH1,PTCH1,PTCH1,PTCH1,PTCH1,PTCH1,PTCH1	367376,358,8774,8774,89,89,-534,-752
chr3:44283033-44283406	chr3	+	44283071	44283345	True	NM_181489,NM_001145030	chr3,chr3	-,+	ZNF445,C3orf77	235867,32
chr19:50835714-50836202	chr19	+	50835719	50836250	True	NM_004977,NM_007121	chr19,chr19	-,+	KCNC3,NR1H2	-3085,43434
chr1:33002110-33003821	chr1	+	33002353	33003870	True	NM_178547,NM_001040441	chr1,chr1	-,+	ZBTB8OS,ZBTB8A	112365,901
chr2:131436192-131437496	chr2	+	131436522	131437462	True	NR_023391,NM_001079530	chr2,chr2	+,-	C2orf14,CFC1B	160,-79271
chr2:131436192-131437496	chr2	+	132044111	132044169	False	NR_030728,NM_001077637	chr2,chr2	+,-	LOC440910,LOC150786	-7307,77620
chr2:131436192-131437496	chr2	-	131199208	131200148	False	NM_032357,NM_001079530	chr2,chr2	-,+	CCDC115,CFC1B	-99286,78518
chr2:131436192-131437496	chr2	-	130808347	130808781	False	NR_026758,NM_032144	chr2,chr2	-,+	LOC440905,RAB6C	-27,-71171
chr4:17803647-17804806	chr4	+	17803753	17804468	True	NM_017741,NM_022346	chr4,chr4	-,+	DCAF16,NCAPG	7972,8056
chr19:4010078-4010286	chr19	+	4010084	4010278	True	NM_015897,NM_001961	chr19,chr19	+,-	PIAS4,EEF2	-2386,-24623
chr20:3765679-3766171	chr20	+	3765738	3766148	True	NM_001810,NM_015417,NM_004358	chr20,chr20,chr20	-,-,+	CENPB,SPEF1,CDC25B	1239,-3636,10252
chrX:52895559-52896718	chrX	+	52895761	52896764	True	NM_133179,NM_014138,NM_130776	chrX,chrX,chrX	-,+,-	XAGE3,FAM156A,XAGE3	405,31097,2
chr7:141490796-141491731	chr7	+	141490815	141491306	True	NM_018980,NM_001008270	chr7,chr7	+,-	TAS2R5,PRSS37	-849,49972
chr17:255190-256280	chr17	+	255340	256088	True	NM_182705,NM_001013672	chr17,chr17	-,+	FAM101B,C17orf97	39700,4029
chr17:4690279-4690526	chr17	+	4690278	4690341	True	NM_002798,NM_001014985,NM_001144939,NM_001144941,NM_001144940,NM_182566	chr17,chr17,chr17,chr17,chr17,chr17	+,+,-,-,-,-	PSMB6,GLTPD2,VMO1,VMO1,VMO1,VMO1	9115,1912,-549,-549,-549,-549
chr12:108717188-108717927	chr12	+	108717240	108717746	True	NM_001142345,NM_007076	chr12,chr12	-,+	CMKLR1,FICD	-2801,191304
chr5:118603683-118604228	chr5	+	118603841	118604141	True	NM_173666,NM_001077654	chr5,chr5	-,+	DTWD2,TNFAIP8	-279601,276
chr11:44115927-44117192	chr11	+	44115972	44116967	True	NM_021926,NM_001178083,NM_207122,NM_000401	chr11,chr11,chr11,chr11	-,+,+,+	ALX4,EXT2,EXT2,EXT2	214801,131,131,779
chr17:1085181-1085485	chr17	+	1085194	1085528	True	NM_001164405,NM_021962,NM_001159746	chr17,chr17,chr17	+,-,-	BHLHA9,ABR,ABR	88329,-2063,5138
chr3:12044409-12044722	chr3	+	12044417	12044694	True	NM_138807,NM_003256,NM_133625,NM_003178	chr3,chr3,chr3,chr3	-,-,+,+	C3orf31,TIMP4,SYN2,SYN2	-156065,156208,1167,1167
chr6:2906144-2906822	chr6	+	2906228	2906816	True	NR_026855,NM_004155	chr6,chr6	+,-	DKFZP686I15217,SERPINB9	81384,-2683
chr14:74416697-74416925	chr14	+	74416858	74416966	True	NM_182480,NM_152445,NM_182476	chr14,chr14,chr14	+,-,+	COQ6,FAM161B,COQ6	-266,-23,-11
chr3:140401659-140403426	chr3	+	140401673	140403338	True	NM_178177,NM_152616	chr3,chr3	-,+	NMNAT3,TRIM42	-1004788,-4858
chr17:37557441-37557659	chr17	+	37557524	37557656	True	NM_001184906,NM_015083,NM_032875	chr17,chr17,chr17	-,+,-	FBXL20,CDK12,FBXL20	303,60082,303
chrX:103215339-103215778	chrX	+	103215369	103215803	True	NM_194324,NM_001002916	chrX,chrX	+,-	TMSB15B,H2BFWT	1396,52503
chr7:766733-766949	chr7	+	766754	766960	True	NM_017802,NM_001164760,NM_001164758,NM_001164759	chr7,chr7,chr7,chr7	+,-,-,-	HEATR2,PRKAR1B,PRKAR1B,PRKAR1B	-467,68,403,403
chr2:200332981-200333701	chr2	+	200333064	200333667	True	NM_015265,NM_001172517,NR_026830	chr2,chr2,chr2	-,-,+	SATB2,SATB2,FLJ32063	2373,-3233,-302
chrX:134953055-134953292	chrX	+	134953081	134953253	True	NM_001007551,NM_018666,NM_001172288	chrX,chrX,chrX	-,+,-	CT45A5,SAGE1,CT45A5	791,22531,791
chrX:134953055-134953292	chrX	-	134866954	134867130	False	NM_152582,NM_001017436	chrX,chrX	+,+	CT45A2,CT45A4	-791,-791
chrX:134953055-134953292	chrX	-	134884228	134884400	False	NM_001017436,NM_001017435	chrX,chrX	-,+	CT45A4,CT45A3	52385,-791
chrX:134953055-134953292	chrX	+	134970331	134970503	False	NM_001017438,NM_018666	chrX,chrX	-,+	CT45A6,SAGE1	791,5281
chrX:134953055-134953292	chrX	+	134935818	134935994	False	NM_018666,NM_001017436	chrX,chrX	+,-	SAGE1,CT45A4	39790,791
chr13:103453213-103453895	chr13	+	103453222	103453942	True	NM_001159596,NM_024089,NM_017693,NM_001204425	chr13,chr13,chr13,chr13	+,-,+,+	BIVM,KDELC1,BIVM,BIVM-ERCC5	-1874,-1818,-1874,5553
chr4:77872289-77874020	chr4	+	77872384	77873956	True	NM_001029870,NM_018243	chr4,chr4	-,+	ANKRD56,SEPT11	-53382,-1540
chr11:16380712-16382403	chr11	+	16380819	16382137	True	NM_001145819,NM_014267	chr11,chr11	-,+	SOX6,C11orf58	42326,378010
chr19:51483656-51484550	chr19	+	51483668	51483804	True	NM_005046,NM_005551,NM_139277	chr19,chr19,chr19	-,+,-	KLK7,KLK2,KLK7	3396,-107030,3317
chrY:6271180-6271439	chrY	+	6271189	6271387	True	NR_001538,NR_001536	chrY,chrY	+,-	TTTY1,TTTY2	-12768,25148
chrY:6271180-6271439	chrY	-	9598982	9599180	False	NR_001538,NR_003590	chrY,chrY	-,+	TTTY1,TTTY2B	12768,-25138
chr18:77724760-77725209	chr18	+	77724921	77725238	True	NM_001136180,NM_025078	chr18,chr18	+,-	HSBP1L1,PQLC1	-390,-13268
chr5:10307027-10307693	chr5	+	10307071	10307651	True	NM_005885,NM_138809	chr5,chr5	+,-	MARCH6,CMBL	46176,567
chr8:42626909-42627532	chr8	+	42627223	42627335	True	NM_001199279,NM_000749,NM_004198	chr8,chr8,chr8	-,+,-	CHRNA6,CHRNB3,CHRNA6	-3294,-74725,-3294
chr1:11726366-11726732	chr1	+	11726376	11726780	True	NM_018438,NM_012168	chr1,chr1	+,-	FBXO6,FBXO2	-2277,-11488
chrX:36977373-36978553	chrX	+	36978160	36978425	True	NM_006520,NM_001013736	chrX,chrX	-,+	DYNLT3,FAM47C	728515,48006
chr14:100109670-100110117	chr14	+	100109721	100110085	True	NM_032425,NM_001127258,NM_001144995	chr14,chr14,chr14	+,+,-	HHIPL1,HHIPL1,CCDC85C	1394,1394,-38994
chr22:51063956-51064353	chr22	+	51064001	51064273	True	NM_000487,NM_016431,NM_001085428,NM_001085426,NM_001085427,NM_001085425	chr22,chr22,chr22,chr22,chr22,chr22	-,+,-,-,-,-	ARSA,MAPK8IP2,ARSA,ARSA,ARSA,ARSA	2378,-22490,2378,2378,2378,2378
chr5:131629049-131629306	chr5	+	131629117	131629283	True	NM_003059,NM_001142599	chr5,chr5	+,-	SLC22A4,P4HA2	861,-65561
chr6:165498171-165498890	chr6	+	165498194	165498910	True	NM_144980,NR_027284	chr6,chr6	-,+	C6orf118,LOC441177	224251,902128
chr22:26959588-26959833	chr22	+	26959605	26959849	True	NM_001008566,NR_031615,NM_001886	chr22,chr22,chr22	-,-,+	TPST2,MIR548J,CRYBA4	1571,-8316,58078
chr1:151689252-151689566	chr1	+	151689349	151689556	True	NM_001144956,NM_001172649,NM_007185,NM_001172648	chr1,chr1,chr1,chr1	+,-,-,-	RIIAD1,CELF3,CELF3,CELF3	4456,-467,-59,-557
chr8:94776845-94778505	chr8	+	94776914	94778231	True	NM_001142301,NR_024522,NM_203390,NM_153704	chr8,chr8,chr8,chr8	+,+,-,+	TMEM67,TMEM67,RBM12B,TMEM67	-9903,-9903,-23690,-9903
chr22:42608176-42609481	chr22	+	42608348	42609462	True	NM_005650,NM_181492,NR_036498	chr22,chr22,chr22	-,-,+	TCF20,TCF20,LOC388906	2033,2033,56296
chr6:87865976-87867447	chr6	+	87866135	87867349	True	NM_000735,NM_015021	chr6,chr6	-,+	CGA,ZNF292	-61311,-917
chr22:50922276-50923452	chr22	+	50922372	50923254	True	NM_024866,NM_017584,NM_002972	chr22,chr22,chr22	+,+,-	ADM2,MIOX,SBF1	-2418,1958,-8908
chr7:76054753-76055001	chr7	+	76054827	76055007	True	NM_080744,NM_001110354	chr7,chr7	-,+	SRCRB4D,ZP3	-15815,-606
chr22:46450606-46451092	chr22	+	46450728	46451037	True	NM_018280,NR_027034,NR_027036	chr22,chr22,chr22	-,+,-	C22orf26,LOC150381,LOC100271722	-704,-1053,-9980
chr1:1822417-1822702	chr1	+	1822546	1822642	True	NM_002074,NM_138705	chr1,chr1	-,+	GNB1,CALML6	-20,23623
chr10:106015314-106017220	chr10	+	106015354	106016993	True	NM_004832,NM_001191002,NM_001191003,NM_025145	chr10,chr10,chr10,chr10	+,+,+,-	GSTO1,GSTO1,GSTO1,WDR96	-937,-937,-1453,-23234
chr19:54384495-54385079	chr19	+	54384510	54385114	True	NM_144687,NM_002739	chr19,chr19	-,+	NLRP12,PRKCG	-56862,352
chr3:9959647-9961048	chr3	+	9959756	9960858	True	NR_037807,NM_032732,NM_207351,NM_153460,NM_153461,NM_001203263,NM_001203264,NM_001203265	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,-,+,+,+,+,+	IL17RC,IL17RC,PRRT3,IL17RC,IL17RC,IL17RC,IL17RC,IL17RC	-1049,-1049,33282,-1049,-1025,-1049,-1049,-1049
chr19:752902-753476	chr19	+	752951	753301	True	NM_214710,NM_173481	chr19,chr19	-,+	PRSS57,C19orf21	-57490,-1856
chr19:6280386-6281162	chr19	+	6280419	6280977	True	NM_006012,NM_005934	chr19,chr19	+,-	CLPP,MLLT1	80485,-460
chr1:155037282-155038299	chr1	+	155037306	155038117	True	NM_182689,NM_144622,NM_182690,NM_005227	chr1,chr1,chr1,chr1	+,-,+,+	EFNA4,DCST2,EFNA4,EFNA4	-1145,-31049,-1145,-1145
chr1:228611863-228612892	chr1	+	228612015	228612837	True	NM_001024940,NM_003493,NM_001134855,NM_175055,NM_016102	chr1,chr1,chr1,chr1,chr1	-,-,-,+,-	TRIM17,HIST3H3,TRIM17,HIST3H2BB,TRIM17	-7432,239,-7432,32970,-7432
chr10:99161851-99162381	chr10	+	99162118	99162207	True	NM_015179,NM_001145114,NM_002629	chr10,chr10,chr10	-,-,+	RRP12,RRP12,PGAM1	-991,-991,23819
chr13:21712148-21713497	chr13	+	21712538	21713088	True	NM_001166017,NM_005870	chr13,chr13	-,+	SKA3,SAP18	37703,1564
chr1:2983745-2983948	chr1	+	2983859	2983951	True	NM_022114,NR_024371,NR_015440,NM_199454	chr1,chr1,chr1,chr1	+,-,-,+	PRDM16,FLJ42875,FLJ42875,PRDM16	1790,388,388,1790
chr3:125634519-125634766	chr3	+	125634730	125634790	True	NM_001015050,NR_024251,NR_024250	chr3,chr3,chr3	-,+,+	ALG1L,LOC100125556,LOC100125556	21147,653,653
chr19:42577692-42578807	chr19	+	42578663	42578857	True	NM_022752,NM_002088	chr19,chr19	+,-	ZNF574,GRIK5	1432,-8706
chr1:242162101-242162362	chr1	+	242162175	242162396	True	NM_006027,NM_001004343	chr1,chr1	+,-	EXO1,MAP1LC3C	-150194,39
chr14:75984195-75985120	chr14	+	75984389	75985165	True	NM_006399,NM_007176	chr14,chr14	+,-	BATF,C14orf1	3618,142430
chr16:77469071-77469480	chr16	+	77469175	77469401	True	NM_001129979,NM_199355	chr16,chr16	+,-	SYCE1L,ADAMTS18	-235877,-164
chr18:21579990-21581880	chr18	+	21580571	21581693	True	NM_153211,NM_018030	chr18,chr18	+,-	TTC39C,OSBPL1A	-7885,270561
chr7:100317650-100318053	chr7	+	100317803	100318027	True	NM_000799,NM_022574	chr7,chr7	+,-	EPO,GIGYF1	395,-30933
chr1:62660943-62661145	chr1	+	62660970	62661144	True	NM_181712,NM_001164835,NM_019079	chr1,chr1,chr1	-,+,+	KANK4,L1TD1,L1TD1	123989,-547,-547
chr4:41634215-41634823	chr4	+	41634334	41634794	True	NM_001112720,NM_003924	chr4,chr4	+,-	LIMCH1,PHOX2B	-19466,116243
chr3:123814759-123815274	chr3	+	123814847	123815295	True	NR_028136,NM_003947,NM_001024660,NM_017578	chr3,chr3,chr3,chr3	+,+,+,-	KALRN,KALRN,KALRN,ROPN1	-1340,-1340,-1340,-104648
chr12:40500005-40501805	chr12	+	40500020	40501770	True	NM_052885,NM_198578	chr12,chr12	-,+	SLC2A13,LRRK2	-359,117042
chr2:8113274-8114095	chr2	+	8113347	8114092	True	NM_002166,NR_015405	chr2,chr2	+,-	ID2,LOC339788	708020,2903
chr21:35441397-35442899	chr21	+	35441450	35442683	True	NM_032476,NM_006933,NM_001697	chr21,chr21,chr21	+,+,-	MRPS6,SLC5A3,ATP5O	3139,3186,-153292
chr9:96869333-96871086	chr9	+	96869554	96871022	True	NM_021570,NM_152422	chr9,chr9	-,+	BARX1,PTPDC1	-151946,-22867
chr2:68386786-68387259	chr2	+	68386874	68387072	True	NM_138458,NM_020143	chr2,chr2	-,+	WDR92,PNO1	-2218,-1928
chr8:121478968-121480926	chr8	+	121479188	121480899	True	NM_022045,NM_014078	chr8,chr8	+,-	MTBP,MRPL13	-21586,-21541
chr14:73495641-73496464	chr14	+	73495743	73495993	True	NM_021239,NM_021260	chr14,chr14	+,-	RBM25,ZFYVE1	29227,-1823
chr6:35436448-35436689	chr6	+	35436463	35436665	True	NM_003214,NM_007104	chr6,chr6	-,+	TEAD3,RPL10A	28246,-336
chr5:10354869-10356805	chr5	+	10354914	10356159	True	NM_005885,NM_138809	chr5,chr5	+,-	MARCH6,CMBL	-1141,-46746
chr19:14138082-14139062	chr19	+	14138167	14139023	True	NM_004843,NM_002918,NM_080864	chr19,chr19,chr19	+,-,+	IL27RA,RFX1,RLN3	3238,-21033,-7
chr1:167693687-167695092	chr1	+	167693733	167694506	True	NM_003851,NM_024569,NM_001146191,NM_003953	chr1,chr1,chr1,chr1	-,+,+,+	CREG1,MPZL1,MPZL1,MPZL1	-170677,-2597,-2597,-2597
chr17:7169350-7169724	chr17	+	7169369	7169702	True	NM_001307,NM_203414,NM_001185023,NM_001185022	chr17,chr17,chr17,chr17	-,+,-,-	CLDN7,C17orf81,CLDN7,CLDN7	-3105,-13878,-3105,-2857
chr8:143750787-143751035	chr8	+	143750825	143751024	True	NR_033343,NM_003724,NM_001077527	chr8,chr8,chr8	+,-,-	PSCA,JRK,JRK	701,427,427
chr5:157873665-157874874	chr5	+	157873807	157874851	True	NM_014666,NM_173491	chr5,chr5	-,+	CLINT1,LSM11	-587624,-703103
chr11:2465026-2465290	chr11	+	2465084	2465274	True	NM_000218,NM_014555	chr11,chr11	+,-	KCNQ1,TRPM5	946,-20809
chr2:187713972-187714422	chr2	+	187713978	187714446	True	NM_182521,NM_177454	chr2,chr2	-,+	ZSWIM2,FAM171B	-81,-155240
chr1:45957825-45958114	chr1	+	45957849	45958095	True	NM_007170,NR_033296,NR_033297,NM_015506,NR_033298	chr1,chr1,chr1,chr1,chr1	-,-,-,+,-	TESK2,CCDC163P,CCDC163P,MMACHC,CCDC163P	-1009,7706,7706,7760,7706
chr7:53070259-53070980	chr7	+	53070374	53071000	True	NM_182595,NR_004422	chr7,chr7	+,-	POM121L12,HPVC1	32348,1199164
chr4:113197100-113197519	chr4	+	113197103	113197549	True	NM_001102406,NM_052864	chr4,chr4	+,-	ALPK1,TIFA	20949,9560
chr7:100664143-100664557	chr7	+	100664299	100664428	True	NM_003378,NM_001040105	chr7,chr7	-,+	VGF,MUC17	144481,-986
chr7:132311348-132312732	chr7	+	132311498	132312712	True	NM_001037126,NM_181775	chr7,chr7	+,-	EXOC4,PLXNA4	625110,20793
chr2:233924799-233925158	chr2	+	233924822	233925064	True	NM_001017915,NM_005541,NM_019850	chr2,chr2,chr2	+,+,-	INPP5D,INPP5D,NGEF	11,11,-46871
chr3:44466741-44467548	chr3	+	44466861	44467432	True	NM_173826,NM_181489	chr3,chr3	+,-	C3orf23,ZNF445	-86977,51787
chr21:19636840-19637220	chr21	+	19636950	19637240	True	NM_002772,NM_001204174	chr21,chr21	-,+	TMPRSS15,CHODL	138780,-18809
chr8:18612658-18614356	chr8	+	18613011	18614122	True	NM_000015,NM_206909	chr8,chr8	+,-	NAT2,PSD3	-364322,52333
chr12:6420294-6420536	chr12	+	6420465	6420547	True	NM_001144857,NM_001144856,NM_001065,NM_018173	chr12,chr12,chr12,chr12	+,+,-,+	PLEKHG6,PLEKHG6,TNFRSF1A,PLEKHG6	1269,-420,30786,-917
chr5:129241863-129242257	chr5	+	129241871	129242282	True	NR_024611,NM_175856	chr5,chr5	-,+	HINT1,CHSY3	1258794,-1399
chr9:46272698-46274263	chr9	+	46272697	46274312	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2641967,413253
chr9:46272698-46274263	chr9	+	67681896	67681954	False	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	112285,244806
chr9:46272698-46274263	chr9	-	47167503	47167561	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-3536773,-479988
chr9:46272698-46274263	chr9	+	44760667	44760717	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	229518,-1129937
chr9:46272698-46274263	chr9	-	45109007	45110622	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-118822,-1478277
chr5:129241382-129241863	chr5	+	129241469	129241881	True	NR_024611,NM_175856	chr5,chr5	-,+	HINT1,CHSY3	1259195,-997
chr15:61519197-61519941	chr15	+	61519208	61519855	True	NM_134261,NM_207322	chr15,chr15	-,+	RORA,C2CD4A	1697,839320
chr1:46770350-46770705	chr1	+	46770350	46770665	True	NM_006004,NM_006369	chr1,chr1	+,-	UQCRH,LRRC41	-1028,-1312
chr20:46617556-46618804	chr20	+	46617597	46618775	True	NR_026958,NM_198596	chr20,chr20	+,-	LOC284749,SULF2	369878,-202237
chr10:101384514-101385863	chr10	+	101384642	101385876	True	NM_020354,NM_031212	chr10,chr10	+,-	ENTPD7,SLC25A28	33386,-4421
chr19:474690-474947	chr19	+	474781	474919	True	NM_182577,NM_130760	chr19,chr19	-,+	ODF3L2,MADCAM1	114,21570
chr11:44086547-44087517	chr11	+	44086831	44087451	True	NM_032592,NM_021926,NM_001127219	chr11,chr11,chr11	+,-,+	ACCS,ALX4,ACCS	360,244315,277
chr17:55922053-55922724	chr17	+	55922169	55922720	True	NM_016070,NM_080677	chr17,chr17	-,+	MRPS23,DYNLL2	4770,238059
chr19:53464739-53465712	chr19	+	53464778	53465493	True	NM_152473,NM_001202456,NM_001202473,NM_001031665,NM_001202457	chr19,chr19,chr19,chr19,chr19	+,-,-,-,-	HERV-V1,ZNF816,ZNF816-ZNF321,ZNF816,ZNF816	51850,721,721,721,721
chr22:22239678-22240261	chr18	+	11897086	11906227	False	NM_023075,NM_020412	chr18,chr18	-,+	MPPE1,CHMP1B	11311,-45757
chr22:22239678-22240261	chr22	+	22239715	22240253	True	NM_148176,NM_138957	chr22,chr22	+,-	PPIL2,MAPK1	-219493,-17745
chrY:20713117-20714290	chrY	+	20713552	20714287	True	NM_033108,NM_152584,NR_003509,NR_001530,NM_001001877,NR_003510,NM_153716	chrY,chrY,chrY,chrY,chrY,chrY,chrY	+,+,+,-,+,+,+	HSFY1,HSFY1,HSFY2,TTTY9A,HSFY2,HSFY1,HSFY2	-5038,-5035,-5055,38170,-5035,-5035,-5055
chrY:20713117-20714290	chrY	-	20929886	20930621	False	NM_033108,NR_002159,NM_152584,NR_003509,NM_001001877,NR_003510,NM_153716	chrY,chrY,chrY,chrY,chrY,chrY,chrY	-,+,-,-,-,-,-	HSFY1,TTTY9B,HSFY1,HSFY2,HSFY2,HSFY1,HSFY2	5042,-38169,5039,5059,5039,5039,5059
chr11:108338211-108338866	chr11	+	108338221	108338496	True	NM_004398,NM_152587	chr11,chr11	+,-	DDX10,C11orf65	197319,29
chr13:24151384-24152217	chr13	+	24151503	24152215	True	NM_148957,NM_001204458,NM_001204459,NM_014363,NM_018647	chr13,chr13,chr13,chr13,chr13	+,+,+,-,+	TNFRSF19,TNFRSF19,TNFRSF19,SACS,TNFRSF19	-7045,1283,-7045,-143662,1283
chr10:77165224-77165429	chr10	+	77165256	77165478	True	NM_032772,NR_024422,NR_024421	chr10,chr10,chr10	-,+,+	ZNF503,NCRNA00245,NCRNA00245	-3743,-1793,-4021
chr17:36997213-36997418	chr17	+	36997324	36997410	True	NM_006148,NM_001080465	chr17,chr17	+,-	LASP1,C17orf98	28701,282
chr16:2005707-2007102	chr16	+	2005840	2006977	True	NR_003142,NM_174903,NM_005061,NM_002952,NR_002327,NR_002326,NR_003020,NM_004548	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,-,-,-,-,+,+	SNHG9,RNF151,RPL3L,RPS2,SNORA10,SNORA64,SNORA78,NDUFB10	8019,9897,-1161,7907,5547,6187,8207,2539
chr5:15504284-15505304	chr5	+	15504388	15505336	True	NM_054027,NM_012304	chr5,chr5	-,+	ANKH,FBXL7	-632501,-4138
chr16:81249579-81250005	chr16	+	81249607	81250003	True	NM_017429,NM_052892,NM_001076780	chr16,chr16,chr16	+,-,-	BCMO1,PKD1L2,PKD1L2	22292,4022,4022
chr3:179067588-179068734	chr3	+	179067627	179068645	True	NM_033540,NM_171828	chr3,chr3	+,-	MFN1,KCNMB3	-2198,-82789
chr18:2846388-2846650	chr18	+	2846463	2846553	True	NR_026659,NM_032048	chr18,chr18	-,+	LOC727896,EMILIN2	100118,474
chr16:77225125-77225409	chr16	+	77225125	77225359	True	NM_001129979,NM_014940,NM_199355	chr16,chr16,chr16	+,+,-	SYCE1L,MON1B,ADAMTS18	7989,-345,243702
chr14:21738055-21738664	chr14	+	21738143	21738419	True	NM_001077443,NM_001077442,NM_020366,NM_004500,NM_031314	chr14,chr14,chr14,chr14,chr14	-,-,+,-,-	HNRNPC,HNRNPC,RPGRIP1,HNRNPC,HNRNPC	-505,-505,17716,-505,-505
chr22:39098901-39099699	chr22	+	39099223	39099606	True	NM_014876,NM_004286	chr22,chr22	-,+	JOSD1,GTPBP1	-2764,2200
chr15:41576040-41576256	chr15	+	41576060	41576250	True	NM_007280,NR_026757	chr15,chr15	-,+	OIP5,LOC729082	48619,-50
chrX:70518645-70518862	chrX	+	70518645	70518738	True	NM_001171162,NM_012278	chrX,chrX	-,+	ZMYM3,ITGB1BP2	-43598,2889
chr19:43679937-43680165	chr19	+	43679940	43680100	True	NR_026881,NM_001130014	chr19,chr19	+,-	PRG1,PSG5	173107,10638
chr20:25565018-25565668	chr20	+	25565176	25565592	True	NM_025176,NM_021067	chr20,chr20	-,+	NINL,GINS1	611,-176905
chr4:572730-572986	chr4	+	572734	572984	True	NM_000283,NM_133474	chr4,chr4	+,-	PDE6B,ZNF721	46378,-79292
chr9:98078884-98079204	chr9	+	98078906	98079167	True	NM_000136,NR_029496	chr9,chr9	-,+	FANCC,MIR24-1	875,-230660
chr17:72933855-72934346	chr17	+	72933870	72934388	True	NM_178233,NM_173477	chr17,chr17	+,-	OTOP3,USH1G	-2024,-14519
chr3:49397808-49399033	chr3	+	49398643	49399008	True	NM_201397,NM_022171,NM_000581	chr3,chr3,chr3	-,+,-	GPX1,TCTA,GPX1	-2852,50630,-2852
chr17:35295273-35295507	chr17	+	35295310	35295548	True	NM_198837,NM_005568	chr17,chr17	-,+	ACACA,LHX1	361194,-589
chr19:54277059-54277641	chr19	+	54277180	54277496	True	NR_030222,NM_033297	chr19,chr19	+,-	MIR519A2,NLRP12	-11633,34521
chr15:23135853-23137623	chr15	+	23136301	23137518	True	NM_001142275,NR_024074	chr15,chr15	-,+	NIPA1,GOLGA8IP	-49458,117723
chr1:170006800-170008146	chr1	+	170007028	170007955	True	NM_001136107,NM_001204517	chr1,chr1	+,-	METTL11B,KIFAP3	107232,30158
chr3:131080929-131081175	chr3	+	131080944	131081218	True	NR_002949,NR_002985,NR_027766	chr3,chr3,chr3	+,-,+	NUDT16P1,SNORA58,NUDT16P1	-306,116909,-277
chr6:111804610-111804969	chr6	+	111804618	111804916	True	NR_034108,NR_034109,NM_002912,NR_034111,NR_034110	chr6,chr6,chr6,chr6,chr6	+,+,-,+,+	LOC643749,LOC643749,REV3L,LOC643749,LOC643749	6,6,-204,6,6
chrX:64769810-64770174	chrX	+	64769810	64770208	True	NM_001010888,NR_033742	chrX,chrX	+,-	ZC3H12B,FKSG43	-61246,2143
chr15:22733166-22734193	chr15	+	22733255	22733325	True	NR_027407,NM_001001413	chr15,chr15	-,+	GOLGA8DP,GOLGA6L1	-17527,2920
chr15:22733166-22734193	chr15	-	23582307	23582377	False	NR_002824,NR_033350	chr15,chr15	-,+	HERC2P2,GOLGA8E	-204048,-147290
chr6:20266075-20267527	chr6	+	20266215	20267505	True	NM_001949,NM_001080480	chr6,chr6	+,-	E2F3,MBOAT1	134631,-53545
chr18:22929924-22930274	chr18	+	22930018	22930078	True	NM_015461,NM_001025096	chr18,chr18	-,+	ZNF521,PSMA8	2186,783737
chr7:148842669-148843159	chr7	+	148842770	148842996	True	NM_170686,NM_001001661	chr7,chr7	+,-	ZNF398,ZNF425	1563,-19332
chr12:13028935-13029635	chr12	+	13028939	13029633	True	NM_018654,NR_003932	chr12,chr12	-,+	GPRC5D,RPL13AP20	73735,-579
chr9:124852705-124854623	chr9	+	124852755	124854121	True	NM_001139442,NM_194252,NM_198469	chr9,chr9,chr9	-,-,+	TTLL11,TTLL11,MORN5	1814,1814,68068
chr10:35478602-35479680	chr10	+	35478748	35479448	True	NM_182717,NM_001198777,NM_182718,NM_182719,NM_182725,NM_182724,NM_182723,NM_182722,NM_182721,NM_182720	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,-,+,+,+,+,+,+,+,+	CREM,CUL2,CREM,CREM,CREM,CREM,CREM,CREM,CREM,CREM	4606,-99178,4606,4606,5381,5381,5381,5381,5381,4606
chr7:99931340-99933006	chr7	+	99932121	99932906	True	NR_036570,NR_036569,NR_003613	chr7,chr7,chr7	+,+,-	PILRB,PILRB,PMS2P1	781,781,1075
chr12:53625388-53625628	chr12	+	53625419	53625571	True	NM_000966,NM_001170790	chr12,chr12	-,+	RARG,MFSD5	515,19798
chr9:139651442-139651691	chr9	+	139651477	139651647	True	NM_203347,NM_178469,NR_033913,NM_198946	chr9,chr9,chr9,chr9	-,-,+,-	LCN15,LCN8,LOC100128593,LCN6	7368,1134,-10915,-8497
chr22:18958085-18958286	chr22	+	18958142	18958326	True	NR_002733,NM_016335	chr22,chr22	+,-	DGCR5,PRODH	-166,-34076
chr16:75467478-75467682	chr16	+	75467489	75467729	True	NM_006324,NM_007285	chr16,chr16	-,+	CFDP1,GABARAPL2	-102,132519
chr5:172074453-172074970	chr5	+	172074641	172074875	True	NM_001142651,NM_004417	chr5,chr5	+,-	NEURL1B,DUSP1	-6416,123378
chr17:20515349-20515834	chr17	+	20515417	20515873	True	NM_001190790,NR_029393	chr17,chr17	+,-	CDRT15L2,KRT16P3	-32431,-107606
chr1:179851906-179852304	chr1	+	179851912	179852236	True	NM_015602,NM_145034,NM_001199260,NM_022347	chr1,chr1,chr1,chr1	+,-,-,-	TOR1AIP1,TOR1AIP2,TOR1AIP2,TOR1AIP2	-543,-4971,-4971,-4971
chr1:202894953-202895432	chr1	+	202895254	202895415	True	NR_002929,NM_021633	chr1,chr1	+,-	LOC148709,KLHL12	-64430,1017
chr15:94856273-94856651	chr15	+	94856286	94856634	True	NM_018349,NR_034095	chr15,chr15	+,-	MCTP2,LOC400456	-14907,1013745
chr9:35901742-35903529	chr9	+	35902511	35903575	True	NR_024283,NM_001004487,NM_001039792	chr9,chr9,chr9	+,-,+	LOC158376,OR13J1,HRCT1	5904,-32113,2613
chr1:40949670-40950408	chr1	+	40949776	40950258	True	NM_001852,NM_198494	chr1,chr1	-,+	COL9A2,ZNF642	-166837,-6533
chr3:140472730-140474131	chr3	+	140472988	140474126	True	NM_178177,NM_152616	chr3,chr3	-,+	NMNAT3,TRIM42	-1076103,-76173
chr6:126112572-126112909	chr6	+	126112600	126112898	True	NM_016063,NM_001122842,NM_181782,NM_001199621	chr6,chr6,chr6,chr6	-,+,+,+	HDDC2,NCOA7,NCOA7,NCOA7	-489318,-749,-749,-749
chr10:131262182-131262775	chr10	+	131262240	131262667	True	NM_002412,NR_036179	chr10,chr10	+,-	MGMT,MIR4297	2786,379021
chr19:33164700-33165413	chr19	+	33164740	33165443	True	NM_207391,NM_032139	chr19,chr19	+,-	RGS9BP,ANKRD27	869,709
chr1:46919265-46920125	chr1	+	46919555	46919949	True	NM_147192,NM_001097611	chr1,chr1	+,-	DMBX1,KNCN	52718,96988
chr16:79750205-79751453	chr16	+	79750622	79751421	True	NM_005360,NM_130897	chr16,chr16	-,+	MAF,DYNLRB2	-116000,823432
chr13:45694818-45696691	chr13	+	45694858	45696390	True	NM_004128,NM_198404	chr13,chr13	+,-	GTF2F2,KCTD4	-278,78840
chr16:46657028-46657266	chr12	+	66397397	66397447	False	NM_032338,NM_003483	chr12,chr12	-,+	LLPH,HMGA2	127136,-179208
chr16:46657028-46657266	chr3	+	128806657	128806889	True	NM_001204886,NM_000174	chr3,chr3	-,+	RAB43,GP9	33808,-27063
chr11:118888686-118888900	chr11	+	118888689	118888915	True	NR_037429,NM_001028,NM_016146	chr11,chr11,chr11	+,-,+	MIR3656,RPS25,TRAPPC4	738,192,325
chr6:70990094-70990558	chr6	+	70990143	70990371	True	NM_078485,NM_001105531	chr6,chr6	-,+	COL9A1,FAM135A	2590,132735
chr4:106833253-106834183	chr4	+	106833253	106833984	True	NM_020395,NM_001184693	chr4,chr4	-,+	INTS12,NPNT	-203372,-16707
chr11:94500747-94501185	chr11	+	94500803	94501203	True	NM_016403,NM_130847	chr11,chr11	-,+	CWC15,AMOTL1	205624,304
chr17:80012286-80012547	chr17	+	80012492	80012586	True	NM_004127,NM_002917,NM_212492	chr17,chr17,chr17	+,-,+	GPS1,RFNG,GPS1	-2780,-2842,-2780
chr22:22901686-22903069	chr22	+	22901915	22902983	True	NR_027426,NM_006115,NM_206953,NM_206955,NM_206954,NM_206956	chr22,chr22,chr22,chr22,chr22,chr22	+,-,-,-,-,-	LOC648691,PRAME,PRAME,PRAME,PRAME,PRAME	-210,-219,-219,-365,-219,-365
chr2:55663640-55665443	chr2	+	55663795	55664714	True	NM_080667,NM_018084	chr2,chr2	+,-	CCDC104,CCDC88A	82025,-16738
chr16:66869446-66870443	chr16	+	66869724	66870251	True	NM_003905,NM_005182,NM_001018159,NM_001014435,NM_001018160	chr16,chr16,chr16,chr16,chr16	-,+,-,+,-	NAE1,CA7,NAE1,CA7,NAE1	-4845,8030,-4845,8589,-4845
chr8:56366702-56366912	chr8	+	56366717	56366955	True	NR_027765,NM_024831	chr8,chr8	-,+	SBF1P1,TGS1	976,318835
chr16:30830563-30831424	chr16	+	30830721	30831064	True	NM_001080417,NM_014771	chr16,chr16	-,+	ZNF629,RNF40	-32198,-57154
chr7:23626977-23628009	chr7	+	23627124	23628051	True	NM_138771,NR_002711	chr7,chr7	+,-	CCDC126,CLK2P	8946,-978
chr7:23626977-23628009	chr7	-	24471214	24471271	False	NM_016447,NM_001127453	chr7,chr7	+,-	MPP6,DFNA5	141813,325869
chr19:8211225-8211945	chr19	+	8211409	8211889	True	NM_024552,NM_032447	chr19,chr19	+,-	LASS4,FBN3	62327,546
chr1:53685965-53686262	chr1	+	53685966	53686310	True	NM_000098,NM_017887	chr1,chr1	+,-	CPT2,C1orf123	-23916,29
chr4:122057719-122058483	chr4	+	122058062	122058520	True	NM_024873,NR_024365	chr4,chr4	-,+	TNIP3,LOC100192379	27016,627219
chr17:77003008-77004543	chr17	+	77003076	77004520	True	NM_001159772,NM_001159773,NM_138793,NM_030968	chr17,chr17,chr17,chr17	-,-,-,+	CANT1,CANT1,CANT1,C1QTNF1	1429,1429,1429,15730
chr17:34318992-34320005	chr17	+	34318993	34319938	True	NR_027922,NR_027921,NM_002988,NM_032963,NM_032962,NM_032965	chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,-,-,-	CCL14-CCL15,CCL14-CCL15,CCL18,CCL14,CCL14,CCL15	9204,9204,71704,-5229,-5229,9204
chr19:55174954-55176885	chr19	+	55175403	55176397	True	NM_006847,NM_001081438,NM_145057	chr19,chr19,chr19	+,+,-	LILRB4,LILRB4,CDC42EP5	-1330,-1330,-190981
chr17:40933115-40934237	chr17	+	40933224	40934074	True	NM_032353,NM_032387,NM_001040431	chr17,chr17,chr17	+,+,-	VPS25,WNK4,CCDC56	-7821,-626,16680
chr15:52385924-52386405	chr15	+	52385950	52386331	True	NM_002748,NM_020396	chr15,chr15	+,-	MAPK6,BCL2L10	-74591,18698
chr16:31021130-31021369	chr16	+	31021206	31021266	True	NM_052874,NM_004604	chr16,chr16	-,+	STX1B,STX4	613,23636
chr11:62689424-62690041	chr11	+	62689456	62690036	True	NR_037193,NM_000738	chr11,chr11	+,-	SLC3A2,CHRM1	-40336,-444
chr3:57095959-57096387	chr3	+	57095970	57096220	True	NM_181727,NM_001128615	chr3,chr3	+,-	SPATA12,ARHGEF3	-1552,17166
chr6:114388884-114389592	chr6	+	114388884	114389573	True	NR_027060,NM_153612	chr6,chr6	+,-	FLJ34503,HS3ST5	-163390,-4843
chrX:49837863-49839198	chrX	+	49837903	49839235	True	NM_139289,NM_000084	chrX,chrX	-,+	AKAP4,CLCN5	125819,-5739
chr17:72209832-72210058	chr17	+	72209831	72210090	True	NR_026914,NM_032646	chr17,chr17	-,+	MGC16275,TTYH2	-371,-186
chr9:107693326-107693928	chr9	+	107693508	107693888	True	NR_024011,NM_005502	chr9,chr9	+,-	LOC286367,ABCA1	-156932,-2981
chr14:105637788-105638001	chr14	+	105637788	105637950	True	NM_177533,NM_033271,NM_145159,NM_002226	chr14,chr14,chr14,chr14	-,+,-,-	NUDT14,BTBD6,JAG2,JAG2	9760,76928,-2627,-2627
chr5:134300647-134301098	chr5	+	134300647	134301011	True	NM_002653,NM_178019	chr5,chr5	-,+	PITX1,CATSPER3	69005,2584
chr5:176923581-176923858	chr5	+	176923635	176923729	True	NM_213636,NM_001174102,NM_203352,NM_005451	chr5,chr5,chr5,chr5	-,+,-,-	PDLIM7,PRR7,PDLIM7,PDLIM7	923,-48360,923,923
chr17:38498075-38498299	chr17	+	38498136	38498324	True	NM_001024809,NM_152219	chr17,chr17	+,-	RARA,GJD3	-20,22671
chr3:134512146-134513238	chr3	+	134512346	134513068	True	NM_178554,NM_004441	chr3,chr3	-,+	KY,EPHB1	-142482,1030
chr3:129690117-129692029	chr3	+	129690192	129691816	True	NM_001128224,NM_007117	chr3,chr3	-,+	TMCC1,TRH	-77773,1297
chr11:73497250-73497485	chr11	+	73497265	73497327	True	NM_198896,NM_016055	chr11,chr11	-,+	RAB6A,MRPL48	-25064,1589
chr12:48151364-48151717	chr12	+	48151457	48151651	True	NM_001098532,NM_001098531,NM_006105,NM_017842	chr12,chr12,chr12,chr12	-,-,-,+	RAPGEF3,RAPGEF3,RAPGEF3,SLC48A1	580,1288,643,15315
chr9:140065123-140065566	chr9	+	140065279	140065593	True	NM_001013653,NR_037416,NM_003731	chr9,chr9,chr9	-,-,+	LRRC26,MIR3621,SSNA1	-788,-1557,17460
chr15:22719648-22721410	chr15	+	22721375	22721454	True	NR_027407,NM_001001413	chr15,chr15	-,+	GOLGA8DP,GOLGA6L1	-5647,14791
chr15:22719648-22721410	chr15	-	20761926	20762005	False	NM_001145004,NR_027411	chr15,chr15	-,+	GOLGA6L6,GOLGA8C	-14812,5668
chr15:22719648-22721410	chr15	-	23429324	23429403	False	NR_002824,NR_033350	chr15,chr15	-,+	HERC2P2,GOLGA8E	-51065,5666
chr15:22719648-22721410	chr15	-	23594143	23594222	False	NR_002824,NR_033350	chr15,chr15	-,+	HERC2P2,GOLGA8E	-215884,-159129
chr8:103935898-103936625	chr8	+	103936049	103936656	True	NM_148174,NM_001695	chr8,chr8	-,+	AZIN1,ATP6V1C1	-59652,96591
chr3:46306425-46307080	chr3	+	46306558	46307048	True	NM_001295,NM_178329	chr3,chr3	-,+	CCR1,CCR3	-56726,-22748
chr1:54620805-54621045	chr1	+	54620844	54621052	True	NM_201546,NM_016491	chr1,chr1	-,+	CDCP2,MRPL37	-1401,44787
chr5:157282074-157282916	chr5	+	157282174	157282632	True	NM_014666,NM_173491,NM_001195555,NM_001195556	chr5,chr5,chr5,chr5	-,+,-,-	CLINT1,LSM11,CLINT1,CLINT1	3601,-111473,3601,3601
chr16:86546136-86546372	chr16	+	86546313	86546381	True	NM_001451,NR_036444,NR_033925	chr16,chr16,chr16	+,-,-	FOXF1,LOC400550,LOC400550	-2231,-3847,-3847
chr4:84188587-84189616	chr4	+	84188600	84189610	True	NM_015697,NM_016067	chr4,chr4	-,+	COQ2,MRPS18C	16507,187507
chr5:159542066-159542554	chr5	+	159542169	159542300	True	NM_001130864,NM_052927,NM_001130958	chr5,chr5,chr5	-,-,+	PWWP2A,PWWP2A,FABP6	4209,4209,72073
chr17:75276173-75276464	chr17	+	75276177	75276454	True	NM_001113492,NM_001113491,NR_036200	chr17,chr17,chr17	+,+,-	SEPT9,SEPT9,MIR4316	7518,1037,116732
chr19:10544971-10546797	chr19	+	10545203	10546795	True	NM_007065,NM_001111309,NM_001111308	chr19,chr19,chr19	-,+,+	CDC37,PDE4A,PDE4A	-30932,-2159,-3749
chrX:130036062-130036826	chrX	+	130036165	130036703	True	NM_144967,NM_182314,NM_006375	chrX,chrX,chrX	+,-,-	ARHGAP36,ENOX2,ENOX2	155512,555,555
chr9:88511657-88513395	chr9	+	88511656	88513340	True	NM_015239,NM_024635	chr9,chr9	-,+	AGTPBP1,NAA35	-154712,42716
chr9:132381130-132382300	chr9	+	132381298	132382251	True	NM_199350,NM_014064	chr9,chr9	-,+	C9orf50,METTL11A	854,6183
chr8:125985844-125986087	chr8	+	125985878	125986078	True	NM_014846,NM_152412	chr8,chr8	-,+	KIAA0196,ZNF572	118033,-390
chr5:65890585-65891186	chr5	+	65890592	65891080	True	NM_001164664,NM_198828,NM_005582	chr5,chr5,chr5	+,+,-	MAST4,MAST4,CD180	1095,1095,601587
chr10:15084242-15084950	chr10	+	15084652	15084834	True	NM_001039844,NM_018324,NM_001039702	chr10,chr10,chr10	-,+,+	ACBD7,OLAH,OLAH	45991,1060,1060
chr22:38885454-38885786	chr22	+	38885550	38885771	True	NM_030881,NM_001098505,NM_006855	chr22,chr22,chr22	-,-,+	DDX17,DDX17,KDELR3	-1015,-1015,-21528
chr1:244820235-244820757	chr1	+	244820467	244820669	True	NR_026778,NM_016076	chr1,chr1	-,+	NCRNA00201,PPPDE1	189630,-4166
chr5:151061308-151061628	chr5	+	151061510	151061620	True	NM_003118,NM_005754	chr5,chr5	-,+	SPARC,G3BP1	4947,89855
chr16:58769634-58769939	chr16	+	58769832	58769984	True	NM_002080,NM_024860	chr16,chr16	-,+	GOT2,SETD6	-1586,-220500
chrX:54068455-54068971	chrX	+	54068874	54068952	True	NM_001184897,NM_001184896,NM_015107,NM_058163,NM_001184898	chrX,chrX,chrX,chrX,chrX	-,-,-,+,-	PHF8,PHF8,PHF8,TSR2,PHF8	1705,2667,1705,397900,725
chr19:16653711-16654670	chr19	+	16653737	16654366	True	NM_006387,NM_032207	chr19,chr19	-,+	CHERP,C19orf44	-474,-46583
chr19:8511647-8512636	chr19	+	8511785	8512497	True	NM_032152,NM_005968,NM_031203	chr19,chr19,chr19	-,+,+	PRAM1,HNRNPM,HNRNPM	55092,-2033,-2033
chr2:128049134-128049692	chr2	+	128049249	128049733	True	NM_000122,NM_000312	chr2,chr2	-,+	ERCC3,PROC	2069,126262
chr17:67248311-67248832	chr17	+	67248579	67248707	True	NM_080282,NM_002758	chr17,chr17	-,+	ABCA10,MAP2K6	-7623,162130
chr9:136152414-136153760	chr9	+	136152552	136153653	True	NM_000972,NM_020469	chr9,chr9	+,-	RPL7A,ABO	61415,-1922
chr10:72362875-72363270	chr10	+	72362882	72363296	True	NM_001083116,NM_080722,NM_005041	chr10,chr10,chr10	-,+,-	PRF1,ADAMTS14,PRF1	-351,69262,-351
chr2:26865793-26866635	chr2	+	26865803	26866374	True	NM_002246,NM_001029881	chr2,chr2	+,-	KCNK3,CIB4	49206,-1592
chr5:151064480-151066014	chr5	+	151064615	151065708	True	NM_003118,NM_005754	chr5,chr5	-,+	SPARC,G3BP1	859,85767
chr1:76252945-76253220	chr1	+	76253168	76253270	True	NM_004582,NM_002440,NM_080868,NR_002749,NR_002748,NR_003042	chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,+,+,+	RABGGTB,MSH4,ASB17,SNORD45A,SNORD45B,SNORD45C	-1340,9359,144898,303,1891,-469
chr17:1957780-1958168	chr17	+	1957842	1957952	True	NM_006497,NM_001098202,NR_029674,NR_029625	chr17,chr17,chr17,chr17	+,+,-,-	HIC1,HIC1,MIR132,MIR212	440,1651,-4540,-4168
chr1:235812334-235812664	chr1	+	235812334	235812580	True	NM_003193,NM_001098722,NM_001098721,NM_004485	chr1,chr1,chr1,chr1	+,-,-,-	TBCE,GNG4,GNG4,GNG4	-281657,763,1524,1524
chr14:61114737-61115238	chr14	+	61114790	61115206	True	NM_001177963,NM_005982	chr14,chr14	+,-	MNAT1,SIX1	86252,999
chr6:73934728-73935305	chr6	+	73935042	73935260	True	NM_001126063,NM_001017361	chr6,chr6	-,+	KHDC1L,C6orf221	13,137139
chr4:113750167-113751037	chr4	+	113750377	113750492	True	NR_029857,NM_001127493	chr4,chr4	-,+	MIR302B,ANK2	-180664,-11199
chr6:36645810-36646306	chr6	+	36645809	36646203	True	NR_037491,NM_078467,NM_000389,NR_037152,NR_037150,NR_037151	chr6,chr6,chr6,chr6,chr6,chr6	-,+,+,+,+,+	MIR3925,CDKN1A,CDKN1A,CDKN1A,CDKN1A,CDKN1A	-55520,-1600,252,-1630,-1553,283
chr17:77002479-77002968	chr17	+	77002642	77003016	True	NM_001159772,NM_001159773,NM_138793,NM_030968	chr17,chr17,chr17,chr17	-,-,-,+	CANT1,CANT1,CANT1,C1QTNF1	2933,2933,2933,17234
chr1:6676380-6677237	chr1	+	6676474	6677093	True	NM_014851,NM_138350,NM_001195752,NM_153812,NM_001195753	chr1,chr1,chr1,chr1,chr1	-,+,+,+,+	KLHL21,THAP3,THAP3,PHF13,THAP3	-13545,8116,8116,-2777,7831
chr19:55479172-55479579	chr19	+	55479176	55479268	True	NM_001174083,NM_001174082,NM_017852,NM_001174081,NM_206828	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	NLRP2,NLRP2,NLRP2,NLRP2,NLRP7	-1517,-1517,-1517,-2576,-20303
chr2:175354314-175354982	chr2	+	175354638	175354993	True	NM_001033045,NM_152529,NM_024583	chr2,chr2,chr2	-,-,+	GPR155,GPR155,SCRN3	-2827,-2827,-94241
chr22:50966507-50967824	chr22	+	50966762	50967554	True	NM_005138,NM_001953,NM_001169111,NM_001169110,NM_001014440,NM_001169109,NM_001113755,NM_001113756,NM_138433	chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,-,-,-,-,+	SCO2,TYMP,SCO2,SCO2,ODF3B,SCO2,TYMP,TYMP,KLHDC7B	-2728,1010,-2729,-2188,3504,-1894,1010,754,18907
chr5:125999961-126000301	chr5	+	126000180	126000322	True	NM_001202404,NM_207408	chr5,chr5	-,+	ALDH7A1,C5orf48	-69098,-32828
chr6:52860232-52860589	chr6	+	52860322	52860428	True	NM_001512,NM_033481	chr6,chr6	-,+	GSTA4,FBXO9	-144,69367
chr3:52281081-52281288	chr3	+	52281157	52281265	True	NM_001122870,NM_007284,NM_144641	chr3,chr3,chr3	+,-,+	PPM1M,TWF2,PPM1M	-1022,-7974,-1399
chr6:136569743-136571041	chr6	+	136570149	136571027	True	NM_001099286,NM_018945,NM_138419	chr6,chr6,chr6	-,+,-	FAM54A,PDE7B,FAM54A	472,-397373,472
chr20:35506838-35507471	chr20	+	35506997	35507519	True	NM_080628,NM_080627	chr20,chr20	+,-	C20orf118,KIAA0889	-2478,-14910
chr5:132946906-132947320	chr5	+	132946990	132947240	True	NM_003202,NM_015082	chr5,chr5	+,-	TCF7,FSTL4	503161,1033
chr20:1186551-1187677	chr20	+	1186777	1187549	True	NM_018354,NM_001009612	chr20,chr20	-,+	C20orf46,C20orf202	-21660,-2730
chr9:136200559-136201363	chr9	+	136200569	136201093	True	NM_000972,NM_006753	chr9,chr9	+,-	RPL7A,SURF6	13975,2004
chr7:91886988-91888358	chr7	+	91887155	91888145	True	NM_194456,NM_019004	chr7,chr7	-,+	KRIT1,ANKIB1	-11741,-11664
chr10:105217768-105218034	chr10	+	105217894	105218028	True	NR_024552,NM_001001412,NM_004210,NM_015916	chr10,chr10,chr10,chr10	-,-,+,-	CALHM2,CALHM1,NEURL,CALHM2	-5732,670,35706,-5732
chr17:36766714-36766971	chr17	+	36766741	36766969	True	NM_025248,NM_005937	chr17,chr17	-,+	SRCIN1,MLLT6	-4558,94903
chr5:112770359-112771331	chr5	+	112770396	112771042	True	NM_032028,NM_022828	chr5,chr5	-,+	TSSK1B,YTHDC2	42,78348
chr19:41882739-41883136	chr19	+	41882820	41883052	True	NM_001098824,NM_030578,NM_001098821,NM_001098822,NM_001098823,NM_001042595	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+	TMEM91,B9D2,TMEM91,TMEM91,TMEM91,TMEM91	-433,-12742,-433,-433,-433,116
chr11:1941217-1942684	chr11	+	1941365	1942429	True	NM_001042782,NM_001042780,NM_001042781,NR_036185,NM_006757	chr11,chr11,chr11,chr11,chr11	+,+,+,-,+	TNNT3,TNNT3,TNNT3,MIR4298,TNNT3	-617,-617,-617,-60599,-617
chr12:40013969-40014238	chr12	+	40013973	40014279	True	NM_001031748,NM_005164	chr12,chr12	+,-	C12orf40,ABCD2	5692,-130
chr1:40508159-40509028	chr1	+	40508162	40508744	True	NM_006367,NM_000310,NM_001105530	chr1,chr1,chr1	+,-,+	CAP1,PPT1,CAP1	-1958,54448,-1958
chr17:7337827-7338281	chr17	+	7337925	7338051	True	NM_152766,NM_178518,NM_175734,NM_004112	chr17,chr17,chr17,chr17	-,+,+,+	C17orf61,TMEM102,C17orf74,FGF11	-30475,710,-9041,4637
chr17:42905020-42906892	chr17	+	42905405	42906845	True	NM_016438,NM_001080383,NM_005497	chr17,chr17,chr17	+,-,-	HIGD1B,GJC1,GJC1	18433,1384,812
chrX:52512741-52514122	chrX	+	52512786	52514114	True	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,+,+,+,+,+,+,+,+,+,+	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	-931,-875,-875,-1084,-875,-875,-875,-931,-1084,-931,-1084,-1084,-1084,-931,-931
chrX:52512741-52514122	chrX	-	52530949	52532277	False	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,-,-,-,-,-,-,-,-,-,-	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	931,875,875,1084,875,875,875,931,1084,931,1084,1084,1084,931,931
chrX:52512741-52514122	chrX	-	52543843	52545171	False	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,-,-,-,-,-,-,-,-,-,-	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	931,875,875,1084,875,875,875,931,1084,931,1084,1084,1084,931,931
chrX:52512741-52514122	chrX	-	52258009	52259337	False	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,-,-,-,-,-,-,-,-,-,-	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	931,875,875,1084,875,875,875,931,1084,931,1084,1084,1084,931,931
chrX:52512741-52514122	chrX	+	52239835	52241163	False	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,+,+,+,+,+,+,+,+,+,+	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	-931,-875,-875,-1084,-875,-875,-875,-931,-1084,-931,-1084,-1084,-1084,-931,-931
chr22:26983597-26984718	chr22	+	26983610	26984756	True	NM_003595,NM_001886	chr22,chr22	-,+	TPST2,CRYBA4	1383,33171
chr1:92495931-92496158	chr1	+	92496061	92496207	True	NM_001195684,NM_173567	chr1,chr1	-,+	TGFBR3,EPHX4	-124502,-579
chr4:90201462-90201776	chr4	+	90201555	90201694	True	NM_145715,NM_198281	chr4,chr4	+,-	TIGD2,GPRIN3	-167646,27518
chr5:146630427-146631068	chr5	+	146630529	146631083	True	NM_181678,NM_001112724	chr5,chr5	-,+	PPP2R2B,STK32A	-169496,-16009
chr5:81574850-81575186	chr5	+	81575084	81575224	True	NM_001017971,NM_001025	chr5,chr5	+,-	ATP6AP1L,RPS23	25941,-849
chr4:113510122-113511936	chr4	+	113510139	113511475	True	NM_018392,NM_016648	chr4,chr4	-,+	C4orf21,LARP7	46738,46644
chr14:74895424-74896067	chr14	+	74895511	74896086	True	NM_001105579,NM_194279	chr14,chr14	-,+	TMEM90A,ISCA2	-2706,64363
chr3:39123814-39124950	chr3	+	39124057	39124930	True	NM_031899,NM_001105513	chr3,chr3	-,+	GORASP1,TTC21A	24250,24221
chr3:87309124-87310219	chr3	+	87309159	87309790	True	NM_014043,NM_000306	chr3,chr3	+,-	CHMP2B,POU1F1	-32804,16008
chr1:1476323-1476549	chr1	+	1476435	1476595	True	NM_001170536,NM_001114748	chr1,chr1	+,-	ATAD3A,C1orf70	-28576,-695
chr4:124694659-124695054	chr4	+	124694807	124695112	True	NM_198041,NR_027106	chr4,chr4	-,+	NUDT6,LOC285419	-850684,306
chr3:124773086-124773459	chr3	+	124773085	124773475	True	NM_020733,NR_033437	chr3,chr3	-,+	HEG1,UMPS	1377,-323923
chrY:10014371-10015149	chrY	+	10014468	10014808	True	NR_003593,NR_003589	chrY,chrY	+,-	TTTY23B,TTTY1B	-266112,-402540
chr4:122690610-122691507	chr4	+	122690696	122691532	True	NM_152399,NR_024365	chr4,chr4	-,+	TMEM155,LOC100192379	-4356,-5007
chr7:100333985-100334213	chr7	+	100333985	100334211	True	NM_173059,NM_003386,NM_022574	chr7,chr7,chr7	+,+,-	ZAN,ZAN,GIGYF1	-2787,-2787,-47115
chr7:32057614-32059382	chr7	+	32057731	32059366	True	NM_001191057,NM_006658	chr7,chr7	-,+	PDE1C,C7orf16	51157,-331166
chr6:139610593-139611390	chr6	+	139610647	139611252	True	NM_153235,NM_016217	chr6,chr6	-,+	TXLNB,HECA	2008,-154454
chr20:62130467-62130703	chr20	+	62130476	62130634	True	NM_024299,NM_001958	chr20,chr20	+,-	PPDPF,EEF1A2	21498,7
chr1:220931920-220932848	chr1	+	220932048	220932786	True	NM_017898,NM_012414	chr1,chr1	+,-	MOSC2,RAB3GAP2	-10427,-486205
chr4:5893860-5894070	chr4	+	5893903	5894033	True	NM_001313,NM_153717,NM_001014809	chr4,chr4,chr4	-,+,-	CRMP1,EVC,CRMP1	-3588,-181030,802
chr16:2961386-2961876	chr16	+	2961463	2961921	True	NM_032296,NM_022119,NM_020912	chr16,chr16,chr16	+,-,+	FLYWCH1,PRSS22,FLYWCH1	58,-53292,58
chrX:9754541-9754782	chrX	+	9754544	9754756	True	NM_000273,NM_001649	chrX,chrX	-,+	GPR143,SHROOM2	-20539,-99
chr18:21714532-21715057	chr18	+	21714532	21714922	True	NM_012189,NM_138643,NM_018030,NM_138644,NM_153770,NM_153769,NM_153768	chr18,chr18,chr18,chr18,chr18,chr18,chr18	+,+,-,+,+,+,+	CABYR,CABYR,OSBPL1A,CABYR,CABYR,CABYR,CABYR	4032,4032,137332,4525,4032,4032,4032
chr8:72755372-72755811	chr8	+	72755460	72755776	True	NM_005098,NR_033651,NR_033652	chr8,chr8,chr8	-,+,+	MSC,LOC100132891,LOC100132891	1005,574,-153
chr12:121088406-121088840	chr12	+	121088431	121088857	True	NM_031205,NM_198202,NM_004276	chr12,chr12,chr12	+,-,+	CABP1,POP5,CABP1	-111,-69230,-111
chr19:57019062-57019283	chr19	+	57019061	57019285	True	NM_020813,NR_030740	chr19,chr19	+,-	ZNF471,ZNF667	-64,-30291
chr19:46366598-46367126	chr19	+	46366605	46367175	True	NM_004819,NM_004497	chr19,chr19	-,+	SYMPK,FOXA3	-57,342
chr1:155562504-155563479	chr1	+	155562625	155563487	True	NM_018116,NM_018489	chr1,chr1	+,-	MSTO1,ASH1L	16519,-30301
chr19:51225933-51226355	chr19	+	51225985	51226355	True	NM_016148,NM_002975	chr19,chr19	-,+	SHANK1,CLEC11A	-5790,249
chr11:129940570-129940809	chr11	+	129940589	129940759	True	NR_024516,NR_024515,NM_001642,NM_001142278,NM_199437,NM_001142277,NM_001142276	chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,-,+,+	APLP2,APLP2,APLP2,APLP2,PRDM10,APLP2,APLP2	-924,-924,-924,-924,-67859,-924,-924
chr14:64190358-64192249	chr14	+	64190473	64192127	True	NM_030791,NM_015180	chr14,chr14	-,+	SGPP1,SYNE2	2679,127555
chr19:35841336-35841579	chr19	+	35841353	35841627	True	NM_005303,NM_152481,NM_005304	chr19,chr19,chr19	+,-,+	FFAR1,FAM187B,FFAR3	817,-121725,7860
chrX:106449800-106451016	chrX	+	106449835	106450665	True	NM_001169154,NM_017681,NM_173494,NR_033676	chrX,chrX,chrX,chrX	+,-,+,-	CXorf41,NUP62CL,CXorf41,NUP62CL	-24,-165,-24,-165
chr6:27725816-27727559	chr6	+	27726334	27727188	True	NM_003509,NM_003519	chr6,chr6	+,-	HIST1H2AI,HIST1H2BL	48788,48571
chr19:50190923-50191329	chr19	+	50190970	50191358	True	NM_001101340,NM_001136052,NM_001571,NM_152359,NM_001199752,NM_001199753	chr19,chr19,chr19,chr19,chr19,chr19	+,+,-,+,+,+	C19orf76,CPT1C,IRF3,CPT1C,CPT1C,CPT1C	583,3006,-21838,3006,3006,3006
chr13:41053515-41054152	chr13	+	41053615	41054192	True	NR_024505,NR_024507,NR_024506,NM_014252	chr13,chr13,chr13,chr13	-,-,-,+	LOC646982,LOC646982,LOC646982,SLC25A15	1001,1001,1001,309354
chr13:98604379-98604932	chr13	+	98604664	98604742	True	NM_178861,NM_002271	chr13,chr13	-,+	RNF113B,IPO5	224837,1186
chr9:125562814-125563108	chr9	+	125562842	125563036	True	NM_080859,NM_005388	chr9,chr9	+,-	OR1K1,PDCL	-491,27949
chr7:75931737-75932136	chr7	+	75931744	75931966	True	NM_012479,NM_001540	chr7,chr7	-,+	YWHAG,HSPB1	56426,36
chr17:19993442-19993776	chr17	+	19993457	19993825	True	NM_001033553,NM_152904,NM_007202	chr17,chr17,chr17	+,+,-	SPECC1,SPECC1,AKAP10	-3173,-3173,-112328
chr8:88884330-88884607	chr8	+	88884337	88884648	True	NM_152418,NM_173538	chr8,chr8	-,+	DCAF4L2,CNBD1	1698,-1005720
chr3:135681564-135682599	chr3	+	135681847	135682539	True	NM_002718,NM_001145417,NM_001190447	chr3,chr3,chr3	+,-,+	PPP2R3A,MSL2,PPP2R3A	1975,230822,1975
chr11:8586374-8586626	chr11	+	8586376	8586642	True	NM_000990,NM_030906	chr11,chr11	+,-	RPL27A,STK33	117352,28911
chr1:27695150-27695680	chr1	+	27695390	27695704	True	NM_003665,NM_005281,NM_004672,NM_173452	chr1,chr1,chr1,chr1	-,+,-,-	FCN3,GPR3,MAP3K6,FCN3	5661,23447,-2053,5661
chr19:38878886-38879222	chr19	+	38878925	38879252	True	NM_001042522,NM_152657,NM_001039616	chr19,chr19,chr19	+,-,+	SPRED3,GGN,SPRED3	1686,-257,1686
chr6:132705131-132706961	chr6	+	132705522	132706432	True	NM_015529,NM_175057	chr6,chr6	-,+	MOXD1,TAAR9	16282,152994
chr1:157809578-157811148	chr1	+	157809636	157810953	True	NM_005894,NM_018240	chr1,chr1	-,+	CD5L,KIRREL	732,152109
chr7:98745336-98747001	chr7	+	98745684	98747035	True	NM_020429,NM_001199847,NR_002147,NM_181349	chr7,chr7,chr7,chr7	-,-,+,-	SMURF1,SMURF1,MYH16,SMURF1	-3941,-3941,123888,-3941
chr22:21274048-21274559	chr22	+	21274072	21274525	True	NM_058004,NM_005207	chr22,chr22	-,+	PI4KA,CRKL	-61002,-2419
chr1:48444148-48444450	chr1	+	48444181	48444423	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	18189,243933
chr5:115143969-115145044	chr5	+	115144016	115145066	True	NM_001284,NM_001801	chr5,chr5	+,-	AP3S1,CDO1	32552,7389
chr5:16183020-16183536	chr5	+	16183295	16183536	True	NM_012304,NM_001102562	chr5,chr5	+,-	FBXL7,MARCH11	-683049,-3398
chr12:132381182-132381557	chr12	+	132381197	132381446	True	NM_175066,NM_003565	chr12,chr12	-,+	DDX51,ULK1	247484,-1969
chr13:52479602-52480859	chr13	+	52479880	52480822	True	NR_027048,NM_031290	chr13,chr13	-,+	NCRNA00282,CCDC70	-60594,-43815
chr13:52439750-52439951	chr13	+	52439816	52439976	True	NR_027048,NM_031290	chr13,chr13	-,+	NCRNA00282,CCDC70	-20530,-3753
chr10:94331867-94332958	chr10	+	94331965	94332931	True	NM_004969,NM_004523	chr10,chr10	-,+	IDE,KIF11	971,19893
chr20:44422193-44424157	chr20	+	44422398	44424162	True	NM_080614,NM_052951	chr20,chr20	-,+	WFDC3,DNTTIP1	-1851,-1886
chr19:41725615-41726454	chr19	+	41725928	41726380	True	NM_001699,NM_000660,NM_021913	chr19,chr19,chr19	+,-,+	AXL,TGFB1,AXL	-871,133501,-871
chr7:134208848-134210145	chr7	+	134209260	134210166	True	NM_001628,NM_020299	chr7,chr7	-,+	AKR1B1,AKR1B10	-65372,2177
chr1:32742266-32742533	chr1	+	32742296	32742502	True	NM_001042771,NR_026850	chr1,chr1	+,-	LCK,MTMR9LP	-2635,-34985
chr9:94185685-94185886	chr9	+	94185693	94185771	True	NR_037472,NM_005384	chr9,chr9	+,-	MIR3910-1,NFIL3	212761,423
chr4:156284504-156284910	chr4	+	156284571	156284961	True	NM_000910,NM_001039580	chr4,chr4	+,-	NPY2R,MAP9	-154847,13218
chr12:52586020-52586611	chr12	+	52586104	52586631	True	NM_182507,NM_001081492,NR_027358	chr12,chr12,chr12	-,-,+	KRT80,KRT80,LOC283404	-320,-320,18082
chr12:55004386-55005005	chr12	+	55004479	55004971	True	NM_001165975,NR_003039	chr12,chr12	+,-	PDE1B,GLYCAM1	-49438,-233
chr8:17013438-17013657	chr8	+	17013520	17013648	True	NM_013354,NM_016353	chr8,chr8	-,+	CNOT7,ZDHHC2	90789,187
chr10:35432189-35433943	chr10	+	35432273	35433581	True	NM_001198777,NM_183012,NM_183011	chr10,chr10,chr10	-,+,+	CUL2,CREM,CREM	-52703,-5614,-5614
chr1:21768122-21769002	chr1	+	21768241	21768573	True	NM_032264,NM_001113348	chr1,chr1	+,-	NBPF3,ECE1	-1671,-96207
chr5:86693270-86694546	chr5	+	86693542	86694558	True	NM_022650,NM_001199189	chr5,chr5	+,-	RASA1,CCNH	-128833,14213
chr15:40405016-40406381	chr15	+	40405036	40406357	True	NM_001003943,NM_001003942,NM_001003940,NM_001211,NM_033503	chr15,chr15,chr15,chr15,chr15	-,-,-,+,-	BMF,BMF,BMF,BUB1B,BMF	-6749,-6749,-3961,46852,-6397
chr14:92041988-92043346	chr14	+	92042286	92043371	True	NR_003709,NM_001080113	chr14,chr14	+,-	SNORA11B,C14orf184	-449567,-903
chr11:92714844-92716439	chr11	+	92715013	92716105	True	NM_152313,NM_005959	chr11,chr11	-,+	SLC36A4,MTNR1B	215040,-12275
chr5:132362476-132363561	chr5	+	132362480	132363483	True	NM_017665,NM_002154	chr5,chr5	-,+	ZCCHC10,HSPA4	-240,24178
chr21:40555361-40555722	chr21	+	40555361	40555693	True	NM_004627,NM_203433,NM_003720	chr21,chr21,chr21	+,-,-	WRB,PSMG1,PSMG1	196519,29,29
chr12:56120219-56120549	chr12	+	56120493	56120591	True	NM_002905,NM_001780,NM_001199771,NM_001040034	chr12,chr12,chr12,chr12	+,-,+,-	RDH5,CD63,RDH5,CD63	-6393,2369,-6393,2369
chr16:89239602-89240194	chr16	+	89239724	89240016	True	NM_004933,NM_005187	chr16,chr16	+,-	CDH15,CBFA2T3	-1612,-196220
chr2:175219623-175220941	chr2	+	175219622	175220916	True	NM_001145250,NM_004882	chr2,chr2	+,-	SP9,CIR1	-19857,39577
chr7:6867053-6867372	chr7	+	6867066	6867226	True	NM_198097,NM_173565	chr7,chr7	-,+	C7orf28B,RSPH10B	-1140,-73377
chr7:6867053-6867372	chr7	-	5937127	5937181	False	NM_001099697,NM_015622	chr7,chr7	-,+	RSPH10B2,CCZ1	73183,1159
chr11:118015513-118015804	chr11	+	118015515	118015821	True	NR_024527,NM_001142349,NM_001142348,NM_019894,NM_174934	chr11,chr11,chr11,chr11,chr11	-,-,-,+,-	SCN4B,SCN4B,SCN4B,TMPRSS4,SCN4B	413,413,7859,-67839,7859
chr12:48737411-48737788	chr12	+	48737427	48737827	True	NM_001172682,NM_001172681,NM_181788,NM_152320	chr12,chr12,chr12,chr12	-,-,+,-	ZNF641,ZNF641,H1FNT,ZNF641	7252,6897,-14715,6897
chr1:43206035-43206540	chr1	+	43206149	43206353	True	NM_024097,NM_001123395,NM_148960,NM_001185117	chr1,chr1,chr1,chr1	+,-,-,-	C1orf50,CLDN19,CLDN19,CLDN19	26562,-224,-224,-224
chr17:72708882-72710150	chr17	+	72709103	72709907	True	NM_001163989,NM_139018	chr17,chr17	+,-	RAB37,CD300LF	23051,5
chr3:156878602-156879318	chr3	+	156878607	156879319	True	NR_034008,NM_020307	chr3,chr3	+,-	LOC100498859,CCNL1	-70988,-125
chr1:6445331-6445630	chr1	+	6445360	6445580	True	NM_007274,NM_181864,NM_031475	chr1,chr1,chr1	-,-,+	ACOT7,ACOT7,ESPN	8296,353,39267
chr19:33360339-33360542	chr19	+	33360445	33360591	True	NM_014270,NM_001126335,NM_152266	chr19,chr19,chr19	-,-,+	SLC7A9,SLC7A9,C19orf40	142,142,102556
chr2:190446441-190448058	chr2	+	190446520	190447707	True	NM_019048,NM_014585	chr2,chr2	+,-	ASNSD1,SLC40A1	78417,-983
chr1:1049902-1050157	chr1	+	1049931	1050201	True	NM_017891,NR_029639	chr1,chr1	-,+	C1orf159,MIR200B	1585,52282
chr19:51531863-51532578	chr19	+	51531901	51532621	True	NM_145894,NM_145895,NM_145888,NM_002776,NM_001136032,NM_019598,NM_001077500,NM_001167605,NM_006853,NM_144947,NM_014441	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,-,-,-,+	KLK12,KLK12,KLK10,KLK10,KLK11,KLK12,KLK10,KLK11,KLK11,KLK11,SIGLEC9	5578,5578,-8947,-8619,-2029,5578,-8470,-611,-611,-1016,95515
chr10:21830736-21831353	chr10	+	21830915	21831209	True	NM_004641,NM_001195628,NM_001195630,NM_207371,NM_001195626,NM_001195627	chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,-,+,+	MLLT10,MLLT10,MLLT10,C10orf140,MLLT10,MLLT10	-7867,-7867,-7867,-16304,-7394,-7867
chr5:39520903-39522198	chr5	+	39520903	39522252	True	NM_001343,NM_003999	chr5,chr5	-,+	DAB2,OSMR	-95568,-674853
chr9:116176077-116176776	chr9	+	116176079	116176533	True	NM_017443,NR_027261,NM_152786	chr9,chr9,chr9	-,-,+	POLE3,POLE3,C9orf43	-3050,-3124,-3116
chr9:97401857-97402428	chr9	+	97402073	97402465	True	NM_000507,NM_001193331,NM_001127628	chr9,chr9,chr9	-,+,-	FBP1,C9orf3,FBP1	-150,86485,116
chr2:152145689-152145966	chr2	+	152145790	152145898	True	NM_004688,NM_007115	chr2,chr2	-,+	NMI,TNFAIP6	582,68207
chr10:91294122-91294371	chr10	+	91294164	91294402	True	NM_213606,NM_012420	chr10,chr10	-,+	SLC16A12,IFIT5	961,-119890
chr3:171176139-171177053	chr3	+	171176208	171176948	True	NM_015028,NM_001164436,NR_027767,NM_001161566,NM_001161564,NM_001161565,NM_001161562,NM_001161563,NM_001161560,NM_001161561	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-,-,-,-,-	TNIK,TMEM212,TNIK,TNIK,TNIK,TNIK,TNIK,TNIK,TNIK,TNIK	1299,384190,1299,1299,1299,1299,1299,1299,1299,1299
chr12:123874436-123874705	chr12	+	123874436	123874610	True	NM_020382,NM_018183	chr12,chr12	+,-	SETD8,SBNO1	-5783,-39448
chr20:48770643-48770855	chr20	+	48770661	48770895	True	NM_001162505,NM_199129,NR_027889,NM_005194,NM_199203	chr20,chr20,chr20,chr20,chr20	-,-,-,+,-	TMEM189,TMEM189,TMEM189,CEBPB,TMEM189-UBE2V1	-326,-326,-326,36480,-326
chr16:48671158-48672043	chr16	+	48671178	48672085	True	NM_153029,NM_031490	chr16,chr16	-,+	N4BP1,LONP2	-27058,-393018
chr1:185011479-185013194	chr1	+	185011550	185012904	True	NM_052966,NM_007212	chr1,chr1	-,+	FAM129A,RNF2	-67868,1646
chr1:39491320-39491761	chr1	+	39491344	39491544	True	NM_001184979,NM_017821,NM_004552	chr1,chr1,chr1	+,-,+	NDUFS5,RHBDL2,NDUFS5	422,-83888,422
chr1:160162008-160163430	chr1	+	160162131	160163479	True	NM_001231,NR_028106	chr1,chr1	+,-	CASQ1,DCAF8	-1898,68848
chr10:30901237-30902147	chr10	+	30901435	30902147	True	NM_183058,NM_005204	chr10,chr10	-,+	LYZL2,MAP3K8	16558,-178625
chr4:176985149-176985680	chr4	+	176985213	176985600	True	NM_170710,NM_201592,NM_181265	chr4,chr4,chr4	+,-,+	WDR17,GPM6A,WDR17	1384,-61565,1384
chr9:86238348-86239719	chr9	+	86238639	86239365	True	NM_001190727,NM_013438,NM_001001551	chr9,chr9,chr9	+,-,+	C9orf103,UBQLN1,C9orf103	-657,83867,-657
chr8:144502322-144502612	chr8	+	144502390	144502504	True	NM_201589,NM_052924	chr8,chr8	-,+	MAFA,RHPN1	10148,-51416
chr9:88566024-88567982	chr9	+	88566165	88567741	True	NM_024635,NM_016548	chr9,chr9	+,-	NAA35,GOLM1	-10173,146819
chr11:63752393-63752608	chr11	+	63752550	63752618	True	NM_017670,NR_003089,NM_173587	chr11,chr11,chr11	+,+,-	OTUB1,OTUB1,RCOR2	706,706,-68234
chr4:146415405-146416133	chr4	+	146415503	146416156	True	NM_001003688,NM_001102653	chr4,chr4	+,-	SMAD1,OTUD4	-11599,-314671
chr4:120221815-120222433	chr4	+	120221877	120222283	True	NM_019050,NM_001170330,NM_001001701	chr4,chr4,chr4	+,-,-	USP53,C4orf3,C4orf3	-88146,3367,9
chr7:96636662-96636914	chr7	+	96636695	96636957	True	NM_005222,NR_015448	chr7,chr7	+,-	DLX6,DLX6-AS1	-1456,6470
chr1:181451421-181451678	chr1	+	181451494	181451670	True	NM_005819,NM_000721	chr1,chr1	-,+	STX6,CACNA1E	-459448,1045
chr7:27693210-27694634	chr7	+	27693469	27694659	True	NM_152740,NM_001079864	chr7,chr7	-,+	HIBADH,TAX1BP1	8019,85078
chr11:67722337-67722832	chr11	+	67722595	67722852	True	NM_030930,NM_001161473	chr11,chr11	-,+	UNC93B1,ALDH3B1	48791,53195
chr14:65747125-65747550	chr14	+	65747372	65747532	True	NM_178155,NR_024334	chr14,chr14	+,-	FUT8,LOC645431	130307,131853
chr17:79937076-79938466	chr17	+	79937201	79938450	True	NM_178493,NM_024083	chr17,chr17	-,+	NOTUM,ASPSCR1	-18144,-1826
chr1:11940756-11941011	chr1	+	11940840	11941060	True	NM_002521,NR_037806	chr1,chr1	-,+	NPPB,NPPA-AS1	-21848,-40517
chr11:74008292-74009256	chr11	+	74008317	74009274	True	NM_182904,NM_016147	chr11,chr11	-,+	P4HA3,PPME1	13475,-126000
chr19:30434160-30434899	chr19	+	30434226	30434783	True	NM_134447,NM_003796,NM_031448	chr19,chr19,chr19	+,+,-	C19orf2,C19orf2,C19orf12	-854,-854,-227774
chr1:200863684-200863899	chr1	+	200863688	200863852	True	NM_001142569,NM_018265,NM_017596	chr1,chr1,chr1	+,+,-	C1orf106,C1orf106,KIF21B	146,-3100,129026
chr4:100443426-100445295	chr4	+	100443719	100444986	True	NM_152292,NM_032149	chr4,chr4	-,+	RG9MTD2,C4orf17	39899,-11611
chr4:37897179-37897770	chr4	+	37897431	37897801	True	NM_001085400,NM_015173	chr4,chr4	-,+	RELL1,TBC1D1	-209432,-4762
chr6:79583285-79585092	chr6	+	79583510	79585118	True	NM_001010844,NM_017934	chr6,chr6	+,-	IRAK1BP1,PHIP	-6380,202943
chr1:223195861-223196104	chr1	+	223195985	223196143	True	NM_032890,NM_003268	chr1,chr1	+,-	DISP1,TLR5	-207605,120531
chr2:289259-289471	chr2	+	289442	289520	True	NR_024080,NM_001002919	chr2,chr2	+,-	ACP1,FAM150B	-24624,-1134
chr1:213220468-213221320	chr1	+	213220624	213220990	True	NM_012424,NM_144567,NM_001136138	chr1,chr1,chr1	+,-,+	RPS6KC1,ANGEL2,RPS6KC1	3597,-31456,3597
chr4:176686115-176687964	chr4	+	176686352	176687774	True	NM_170710,NM_201591	chr4,chr4	+,-	WDR17,GPM6A	299210,46479
chr10:48443106-48443356	chr10	+	48443112	48443394	True	NM_004962,NM_153034	chr10,chr10	-,+	GDF10,ZNF488	-3974,-88074
chr16:84218260-84218550	chr16	+	84218329	84218527	True	NM_139174,NM_139353,NM_005679,NM_001145400	chr16,chr16,chr16,chr16	+,-,-,+	ADAD2,TAF1C,TAF1C,ADAD2	6195,2185,2185,6195
chr19:3138118-3138366	chr19	+	3138272	3138402	True	NM_198969,NM_002068	chr19,chr19	-,+	AES,GNA15	-75308,-2134
chr7:74304431-74304709	chr7	+	74304436	74304720	True	NR_027777,NR_027776,NM_001025202,NR_027775	chr7,chr7,chr7,chr7	+,+,-,+	PMS2P5,PMS2P5,STAG3L2,PMS2P5	2173,2173,2063,2173
chr7:74304431-74304709	chr7	-	99935599	99935663	False	NR_036570,NR_003613,NR_036569	chr7,chr7,chr7	+,-,+	PILRB,PMS2P1,PILRB	-1964,-1669,-1964
chr7:74304431-74304709	chr7	+	72474171	72474452	False	NM_001013739,NR_003614	chr7,chr7	-,+	STAG3L3,PMS2L2	2064,2227
chr7:74304431-74304709	chr7	-	74990444	74990725	False	NR_003614,NM_001002840,NM_018991	chr7,chr7,chr7	-,+,+	PMS2L2,STAG3L1,STAG3L1	-2229,-2059,-2059
chr1:94372417-94374379	chr1	+	94372644	94374368	True	NR_030621,NM_002061	chr1,chr1	+,-	MIR760,GCLM	-60307,694
chrX:117639146-117639758	chrX	+	117639340	117639672	True	NM_001168301,NM_144658	chrX,chrX	-,+	KLHL13,DOCK11	-388037,-9519
chr9:89699783-89700894	chr9	+	89699786	89700858	True	NR_036691,NM_001001709	chr9,chr9	-,+	LOC494127,C9orf170	-38,62700
chr12:53773676-53773975	chr12	+	53773753	53774018	True	NM_138473,NM_001173467,NM_003109	chr12,chr12,chr12	+,-,+	SP1,SP7,SP1	-40,-43749,409
chr11:3818592-3818796	chr11	+	3818593	3818845	True	NM_005387,NM_139131,NM_139132,NR_027017,NR_027014,NR_027015,NM_001145438,NM_016320	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,+,+,+,+,-	NUP98,NUP98,NUP98,PGAP2,PGAP2,PGAP2,PGAP2,NUP98	227,227,227,344,108,286,203,227
chr17:72271026-72271538	chr17	+	72271055	72271537	True	NR_026914,NM_001172810,NM_023036	chr17,chr17,chr17	-,+,+	MGC16275,DNAI2,DNAI2	-61595,-720,-720
chr17:27918870-27919073	chr17	+	27918976	27919108	True	NM_014030,NM_001085454,NM_152345	chr17,chr17,chr17	-,-,+	GIT1,GIT1,ANKRD13B	-2366,-2366,1418
chr5:162883144-162884228	chr5	+	162883181	162884035	True	NM_012484,NM_012485,NM_145266,NM_001142556,NM_001142557	chr5,chr5,chr5,chr5,chr5	+,+,-,+,+	HMMR,HMMR,NUDCD2,HMMR,HMMR	3481,3481,3160,3481,3481
chr18:5540567-5540803	chr18	+	5540577	5540799	True	NM_012307,NR_015389	chr18,chr18	-,+	EPB41L3,LOC339290	3237,-302532
chr1:236970771-236972008	chr1	+	236971100	236972020	True	NM_018072,NM_000254	chr1,chr1	-,+	HEATR1,MTR	-203259,-12577
chr13:19809839-19811144	chr13	+	19809905	19811158	True	NM_006001,NR_034026	chr13,chr13	-,+	TUBA3C,LOC100287114	-53913,108030
chr12:109489533-109490252	chr12	+	109489772	109490189	True	NM_032663,NM_018711	chr12,chr12	+,-	USP30,SVOP	190,-30927
chr9:133768222-133768929	chr9	+	133768400	133768740	True	NM_005157,NM_198180	chr9,chr9	+,-	ABL1,QRFP	-57620,535
chr1:29065162-29065967	chr1	+	29065288	29065773	True	NM_016258,NM_005644,NM_001173128,NM_001172828	chr1,chr1,chr1,chr1	+,-,+,+	YTHDF2,TAF12,YTHDF2,YTHDF2	-2210,-95684,-2213,-1894
chr3:173114532-173115265	chr3	+	173114660	173115188	True	NM_014932,NM_031955	chr3,chr3	+,-	NLGN1,SPATA16	1055,-255602
chr9:34380006-34380396	chr9	+	34380019	34380409	True	NM_147168,NM_147169,NM_020702,NM_147173	chr9,chr9,chr9,chr9	-,-,-,+	C9orf24,C9orf24,KIAA1161,NUDT2	1239,1239,-3125,-50566
chr6:170862123-170862389	chr6	+	170862208	170862408	True	NM_001172085,NM_002793	chr6,chr6	+,-	TBP,PSMB1	1012,59
chr12:31226555-31226766	chr12	+	31226554	31226780	True	NM_004399,NM_001135811,NM_030653,NM_152438	chr12,chr12,chr12,chr12	+,-,+,+	DDX11,FAM60A,DDX11,DDX11	-2,252391,-2,-2
chr12:53813844-53814857	chr12	+	53813844	53814769	True	NM_001193511,NM_020547,NM_001164691,NM_001164690	chr12,chr12,chr12,chr12	-,+,+,+	MAP3K12,AMHR2,AMHR2,AMHR2	78725,2869,2869,2869
chr8:6423490-6423757	chr8	+	6423499	6423781	True	NM_001118888,NM_018361,NM_001147,NM_001118887	chr8,chr8,chr8,chr8	-,+,-,-	ANGPT2,AGPAT5,ANGPT2,ANGPT2	-2715,142096,-2715,-2715
chr2:113376520-113378189	chr2	+	113376722	113378083	True	NR_033871,NM_005415	chr2,chr2	-,+	FLJ42351,SLC20A1	23725,25350
chr15:28579051-28579293	chr15	+	28579074	28579154	True	NM_004667,NR_033351	chr15,chr15	-,+	HERC2,GOLGA8F	-11779,44629
chr15:28579051-28579293	chr15	-	28822765	28822845	False	NR_036443,NR_033351	chr15,chr15	+,-	HERC2P9,GOLGA8F	76742,-44622
chr15:28579051-28579293	chr15	+	20723208	20723272	False	NR_036432,NR_027411	chr15,chr15	-,+	HERC2P3,GOLGA8C	-11775,44401
chr15:28579051-28579293	chr15	+	23390003	23390121	False	NR_036470,NR_002824	chr15,chr15	+,-	HERC2P7,HERC2P2	600,-11744
chr15:28579051-28579293	chr15	+	23677702	23677766	False	NM_005664,NM_019066	chr15,chr15	+,-	MKRN3,MAGEL2	132687,215277
chr16:88494166-88494367	chr16	+	88494226	88494412	True	NM_000101,NM_001127464	chr16,chr16	-,+	CYBA,ZNF469	223095,-398
chr1:155881278-155881567	chr1	+	155881305	155881459	True	NR_002974,NM_006912,NM_181885	chr1,chr1,chr1	-,-,+	SNORA42,RIT1,RXFP4	8426,-128,30020
chr20:21284591-21285691	chr20	+	21284622	21285724	True	NM_012255,NM_033176	chr20,chr20	+,-	XRN2,NKX2-4	-731,92373
chr10:61466654-61468617	chr10	+	61467138	61468509	True	NM_194298,NM_001143774	chr10,chr10	-,+	SLC16A9,PHYHIPL	1191,-529963
chr7:30053638-30055332	chr7	+	30053804	30055185	True	NM_017946,NM_001197026	chr7,chr7	-,+	FKBP14,PLEKHA8	11148,12791
chr8:21783586-21785147	chr8	+	21783859	21785019	True	NM_003974,NM_015024	chr8,chr8	-,+	DOK2,XPO7	-12654,-6741
chr19:38797614-38797929	chr19	+	38797626	38797978	True	NM_001039673,NM_001145461,NM_001039671,NM_001039672,NM_001145462,NM_033520,NM_033557,NM_001145463	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,+,-,-	YIF1B,YIF1B,YIF1B,YIF1B,YIF1B,C19orf33,YIF1B,YIF1B	8678,8517,8517,8678,8517,-2877,2581,8678
chr17:43240410-43241542	chr17	+	43240743	43241006	True	NM_144608,NM_133373	chr17,chr17	+,-	HEXIM2,PLCD3	-2537,-30852
chr2:34273023-34273793	chr2	+	34273098	34273615	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-534208,-319814
chr22:31892992-31894135	chr22	+	31893025	31893883	True	NM_001164501,NM_014775,NM_001007467,NM_001164502,NM_019843	chr22,chr22,chr22,chr22,chr22	-,+,+,-,-	EIF4ENIF1,SFI1,SFI1,EIF4ENIF1,EIF4ENIF1	-7478,-815,-815,-7151,-7151
chr8:13345240-13346667	chr8	+	13345366	13346398	True	NM_001007090,NM_182643	chr8,chr8	+,-	C8orf48,DLC1	77953,26094
chr16:3926582-3927153	chr16	+	3926605	3927187	True	NM_005223,NM_004380,NM_001079846	chr16,chr16,chr16	+,-,-	DNASE1,CREBBP,CREBBP	-223722,2984,2984
chr19:39928665-39929092	chr19	+	39928673	39928897	True	NM_001111020,NM_003169,NM_001130825,NM_001130824,NM_001020	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	SUPT5H,SUPT5H,SUPT5H,SUPT5H,RPS16	7288,7390,7288,7288,-2055
chr9:128506922-128508320	chr9	+	128507017	128508106	True	NM_001006618,NM_006195,NR_024123,NR_024122,NM_001134778	chr9,chr9,chr9,chr9,chr9	-,+,+,+,+	MAPKAP1,PBX3,PBX3,PBX3,PBX3	-37504,1510,1510,1510,2371
chr19:17861015-17861741	chr19	+	17861020	17861626	True	NM_001161359,NM_001161358,NM_001080421,NM_015122,NM_001161357	chr19,chr19,chr19,chr19,chr19	+,+,-,+,+	FCHO1,FCHO1,UNC13A,FCHO1,FCHO1	659,-2544,-62012,659,-2544
chr10:6107973-6109060	chr10	+	6108093	6109076	True	NM_032905,NM_000417	chr10,chr10	+,-	RBM17,IL2RA	21872,-3760
chrX:152239810-152240062	chrX	+	152239830	152240098	True	NM_032882,NM_001170944	chrX,chrX	+,+	PNMA6A,LOC100287428	740,720
chrX:152239810-152240062	chrX	-	152246698	152246966	False	NM_032882,NM_001170944	chrX,chrX	-,+	PNMA6A,LOC100287428	-740,-5930
chrX:152239810-152240062	chrX	+	152337292	152337560	False	NM_032882	chrX	-	PNMA6A	-91334
chrX:152239810-152240062	chrX	-	152344160	152344428	False	NM_032882	chrX	-	PNMA6A	-98202
chr10:118900326-118901188	chr10	+	118900451	118901219	True	NM_001112704,NM_199131,NM_181840	chr10,chr10,chr10	-,-,+	VAX1,VAX1,KCNK18	-2639,-2639,55780
chr17:26972478-26973690	chr17	+	26972558	26973646	True	NM_014680,NM_003170	chr17,chr17	-,+	KIAA0100,SUPT6H	-385,15655
chr2:220362161-220362361	chr2	+	220362292	220362386	True	NM_013335,NM_205847,NM_001195731	chr2,chr2,chr2	+,+,-	GMPPA,GMPPA,CHPF	1200,1230,45483
chr7:6310699-6311016	chr7	+	6310744	6311038	True	NM_006908,NM_004227	chr7,chr7	+,-	RAC1,CYTH3	103087,1254
chr11:65729608-65731244	chr11	+	65729670	65730831	True	NM_032325,NM_005146	chr11,chr11	-,+	EIF1AD,SART1	38797,-562
chr13:52377902-52378157	chr13	+	52377963	52378099	True	NM_031290,NM_001031719,NM_024705	chr13,chr13,chr13	+,-,-	CCDC70,DHRS12,DHRS12	58017,185,244
chr11:71277425-71277978	chr11	+	71277567	71278013	True	NM_001012710,NM_001005405	chr11,chr11	+,-	KRTAP5-10,KRTAP5-11	-1009,15958
chr17:7517256-7517542	chr17	+	7517330	7517550	True	NR_027463,NM_004860	chr17,chr17	+,-	SHBG,FXR2	1,715
chr5:118604690-118604992	chr5	+	118604727	118604995	True	NM_173666,NM_001077654	chr5,chr5	-,+	DTWD2,TNFAIP8	-280487,-360
chr16:23158861-23159864	chr16	+	23159389	23159859	True	NM_001039,NM_020718	chr16,chr16	+,-	SCNN1G,USP31	34180,782
chr1:204483244-204484546	chr1	+	204483319	204484243	True	NM_001204171,NM_002646,NM_001204172,NR_024171,NM_002393	chr1,chr1,chr1,chr1,chr1	+,-,+,+,+	MDM4,PIK3C2B,MDM4,MDM4,MDM4	1263,-23845,1263,1263,1263
chr19:55087094-55087308	chr19	+	55087250	55087314	True	NM_001130917,NM_006866,NM_145057	chr19,chr19,chr19	+,+,-	LILRA2,LILRA2,CDC42EP5	-2044,-2044,-102828
chrX:40118375-40119917	chrX	+	40118432	40119898	True	NM_001123384,NM_005765	chrX,chrX	-,+	BCOR,ATP6AP2	-81850,320317
chr18:61088616-61089337	chr18	+	61088703	61089205	True	NM_004869,NM_002639	chr18,chr18	-,+	VPS4B,SERPINB5	597,54938
chr16:20777620-20778553	chr16	+	20777619	20778537	True	NM_017736,NM_202000,NM_005622	chr16,chr16,chr16	-,+,+	THUMPD1,ACSM3,ACSM3	-24420,-2365,-2365
chr13:29292924-29293152	chr13	+	29292994	29293188	True	NM_181785,NM_001135919,NM_015932	chr13,chr13,chr13	-,-,+	SLC46A3,SLC46A3,POMP	12,12,-59904
chr16:4381561-4382070	chr16	+	4381599	4382111	True	NM_032575,NM_016069	chr16,chr16	+,-	GLIS2,PAM16	113,19312
chr8:145843297-145844037	chr8	+	145843693	145843867	True	NM_014665,NM_025251	chr8,chr8	+,-	LRRC14,ARHGAP39	-100381,-4805
chr15:66681403-66682003	chr15	+	66681583	66681873	True	NM_002755,NM_017858	chr15,chr15	+,-	MAP2K1,TIPIN	-2430,-32529
chr14:75421080-75421282	chr14	+	75421201	75421281	True	NM_014239,NM_002632	chr14,chr14	+,-	EIF2B2,PGF	48330,1060
chr2:183964579-183964828	chr2	+	183964766	183964838	True	NM_205842,NM_080876	chr2,chr2	-,+	NCKAP1,DUSP19	-61537,-21535
chr22:50920442-50920667	chr22	+	50920646	50920716	True	NM_024866,NM_017584,NM_002972	chr22,chr22,chr22	+,+,-	ADM2,MIOX,SBF1	-685,4496,-7182
chr7:129691720-129692093	chr7	+	129691818	129691957	True	NM_016478,NM_014997	chr7,chr7	-,+	ZC3HC1,KLHDC10	-585,18391
chr6:149804177-149804733	chr6	+	149804248	149804777	True	NM_207360,NM_138785,NM_001002255	chr6,chr6,chr6	-,+,+	ZC3H12D,C6orf72,SUMO4	1428,82750,-82805
chr12:57936523-57936986	chr12	+	57936628	57936766	True	NM_004984,NM_006400	chr12,chr12	+,-	KIF5A,DCTN2	7080,4270
chr7:63597949-63599003	chr7	+	63598070	63598852	True	NM_001159524,NM_178558	chr7,chr7	+,-	ZNF735,ZNF680	68728,424711
chr16:90084772-90085158	chr16	+	90084822	90085100	True	NM_001042610,NR_023348,NM_024043	chr16,chr16,chr16	-,+,-	DBNDD1,GAS8,DBNDD1	887,3907,-8293
chr21:37507521-37507966	chr21	+	37507649	37507953	True	NM_017438,NM_001236	chr21,chr21	-,+	SETD4,CBR3	-74833,-437
chr3:194088328-194089471	chr3	+	194088340	194089312	True	NM_130830,NM_001135057,NR_033929	chr3,chr3,chr3	-,-,+	LRRC15,LRRC15,FLJ34208	1210,1210,118556
chr20:61049582-61049811	chr20	+	61049611	61049825	True	NM_001024,NM_080473	chr20,chr20	+,-	RPS21,GATA5	-87541,1251
chr6:80818402-80818834	chr6	+	80818609	80818885	True	NM_183050,NM_022726,NM_000056	chr6,chr6,chr6	+,-,+	BCKDHB,ELOVL4,BCKDHB	-2322,-161294,-2322
chr4:103204091-103206091	chr4	+	103204456	103206124	True	NM_001135148,NM_001165412	chr4,chr4	-,+	SLC39A8,NFKB1	39395,216361
chr17:19649685-19650389	chr17	+	19649688	19650433	True	NM_000382,NM_001135168,NM_001135167,NM_000691	chr17,chr17,chr17,chr17	+,-,-,-	ALDH3A2,ALDH3A1,ALDH3A1,ALDH3A1	-97676,-916,-763,1369
chr15:77571410-77572402	chr15	+	77571581	77572396	True	NM_018200,NM_024776	chr15,chr15	+,-	HMG20A,PEAK1	140846,4996
chr4:89642488-89644115	chr4	+	89642566	89643965	True	NR_002806,NM_153757	chr4,chr4	+,-	FAM13AOS,NAP1L5	-11677,-23543
chr22:30780890-30781265	chr22	+	30781083	30781143	True	NM_033382,NM_001017981	chr22,chr22	+,-	SEC14L2,RNF215	11786,2209
chr20:34027325-34028030	chr20	+	34027328	34027684	True	NM_007186,NM_000557	chr20,chr20	+,-	CEP250,GDF5	15538,-1301
chr5:140188608-140188971	chr5	+	140188677	140188905	True	NM_031500,NM_031497,NM_018907,NM_018906,NM_002109	chr5,chr5,chr5,chr5,chr5	+,+,+,+,-	PCDHA4,PCDHA3,PCDHA4,PCDHA3,HARS	-2056,-7945,-2056,-7945,-117706
chr12:93145443-93146635	chr12	+	93145479	93146543	True	NM_001004330,NM_003566	chr12,chr12	+,-	PLEKHG7,EEA1	-15265,176614
chr17:26626661-26626987	chr17	+	26626661	26626970	True	NM_014573,NR_028334	chr17,chr17	+,-	TMEM97,FLJ40504	19150,7496
chr14:74417438-74417657	chr14	+	74417468	74417704	True	NM_182480,NM_152445,NM_182476	chr14,chr14,chr14	+,-,+	COQ6,FAM161B,COQ6	-885,-633,-572
chr18:1297095-1298425	chr18	+	1297235	1298005	True	NM_001117,NR_023925	chr18,chr18	+,-	ADCYAP1,C18orf2	-391997,61675
chr14:24702068-24702588	chr14	+	24702254	24702566	True	NM_001199823,NM_006156,NM_001099274,NM_001002001,NM_001002000,NM_001002002,NM_016576,NM_012461	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	-,-,-,+,+,+,+,-	NEDD8-MDP1,NEDD8,TINF2,GMPR2,GMPR2,GMPR2,GMPR2,TINF2	-678,-678,9364,-657,-657,-202,-202,9364
chr10:70090187-70090393	chr10	+	70090186	70090301	True	NM_001033083,NM_021644,NM_012207,NM_022129	chr10,chr10,chr10,chr10	-,+,+,-	PBLD,HNRNPH3,HNRNPH3,PBLD	2436,1466,1466,2436
chrX:30647618-30648272	chrX	+	30647818	30648248	True	NM_000167,NM_025159	chrX,chrX	+,-	GK,CXorf21	23227,-51785
chr14:24641075-24641308	chr14	+	24641111	24641313	True	NM_001048205,NM_024658,NM_005132	chr14,chr14,chr14	+,-,+	REC8,IPO4,REC8	-24,16861,-24
chr3:49712733-49713337	chr3	+	49712758	49713380	True	NM_001640,NM_020998	chr3,chr3	+,-	APEH,MST1	-1374,12866
chr15:29852230-29853611	chr15	+	29852352	29853204	True	NM_015307,NR_026859	chr15,chr15	-,+	FAM189A1,FAM7A3	9773,542730
chr5:138676865-138677357	chr5	+	138676876	138677300	True	NM_016480,NM_001033112,NM_005847	chr5,chr5,chr5	+,+,-	PAIP2,PAIP2,SLC23A1	218,833,41789
chr4:5021781-5022835	chr4	+	5021890	5022518	True	NM_018659,NM_018401	chr4,chr4	-,+	CYTL1,STK32B	-693,31008
chr6:139311553-139312588	chr6	+	139311569	139312589	True	NM_001128617,NM_031922,NM_021243	chr6,chr6,chr6	-,-,+	REPS1,REPS1,C6orf115	-2171,-2171,37229
chr1:12040698-12040961	chr1	+	12040832	12040974	True	NM_001127660,NM_014874,NM_138346	chr1,chr1,chr1	+,+,-	MFN2,MFN2,KIAA2013	-645,-645,-54347
chr4:26486738-26487434	chr4	+	26486850	26487468	True	NM_000730,NM_018317	chr4,chr4	-,+	CCKAR,TBC1D19	4624,98077
chr19:36500721-36502451	chr19	+	36500895	36502251	True	NM_198867,NM_032878,NM_001039876,NM_001042631	chr19,chr19,chr19,chr19	-,-,-,+	ALKBH6,ALKBH6,C19orf46,SDHAF1	2940,2940,-1223,-14856
chr1:3606186-3606623	chr1	+	3606239	3606537	True	NM_001126242,NM_001204189,NM_001126240,NM_001126241,NM_001204192,NM_001204191,NM_001204190,NM_017818	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,+,+,-	TP73,TP73,TP73,TP73,TP73,TP73,TP73,WDR8	698,698,698,698,8072,698,698,-39568
chr14:101363291-101364872	chr14	+	101363295	101364740	True	NR_024149,NM_001134888	chr14,chr14	+,-	MEG8,RTL1	-2239,-12111
chr15:25450523-25450774	chr15	+	25450557	25450819	True	NR_003315,NR_003314,NR_003313,NR_003312,NR_003311,NR_003310,NR_022010,NR_003495,NR_003308,NR_003309,NM_130838,NR_003342,NR_003307	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,+,-,+,+	SNORD115-23,SNORD115-22,SNORD115-21,SNORD115-20,SNORD115-19,SNORD115-18,PAR4,SNORD115-24,SNORD115-16,SNORD115-17,UBE3A,SNORD115-25,SNORD115-15	6123,4245,589,589,-1104,-1104,6019,7986,-6013,-1104,199884,9868,589
chr12:57443175-57443914	chr12	+	57443268	57443951	True	NM_005379,NM_005967	chr12,chr12	-,+	MYO1A,NAB2	-8,38725
chr3:122786893-122787715	chr3	+	122786968	122787745	True	NR_028444,NM_006810,NM_001031702	chr3,chr3,chr3	+,+,-	PDIA5,PDIA5,SEMA5B	-1164,-1164,-40392
chr19:54824164-54824899	chr19	+	54824325	54824684	True	NM_021250,NM_181879,NM_181986,NM_001005367,NM_181985	chr19,chr19,chr19,chr19,chr19	-,-,-,+,-	LILRA5,LILRA5,LILRA5,TTYH1,LILRA5	-44,43,43,101920,43
chr5:80597449-80597678	chr5	+	80597476	80597596	True	NM_032280,NR_034122,NR_034123,NR_034121,NM_001131035,NM_001131036	chr5,chr5,chr5,chr5,chr5,chr5	+,-,-,-,+,+	ZCCHC9,LOC100131067,LOC100131067,LOC100131067,ZCCHC9,ZCCHC9	-125,-88,-88,-88,-125,-125
chr14:100788049-100788340	chr14	+	100788051	100788353	True	NM_001039355,NM_207117	chr14,chr14	-,+	SLC25A29,SLC25A47	-15191,1325
chr7:27238277-27238695	chr7	+	27238295	27238727	True	NM_000522,NR_037843	chr7,chr7	-,+	HOXA13,NCRNA00213	1048,1328
chr3:115376235-115377341	chr3	+	115376325	115377284	True	NM_002045,NM_015642	chr3,chr3	+,-	GAP43,ZBTB20	-34225,-510198
chr17:62340667-62341451	chr17	+	62340743	62341222	True	NM_018469,NR_002995	chr17,chr17	-,+	TEX2,SNORA76	-90,-117095
chr19:29407217-29407569	chr19	+	29407224	29407618	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	48419,296568
chr22:39435339-39435727	chr22	+	39435421	39435686	True	NM_145298,NM_001006666,NM_175709	chr22,chr22,chr22	+,+,-	APOBEC3F,APOBEC3F,CBX7	986,986,112907
chr22:39435339-39435727	chr22	+	39472261	39472311	False	NM_021822,NM_175709	chr22,chr22	+,-	APOBEC3G,CBX7	698,76277
chr3:139109301-139111177	chr3	+	139109677	139110995	True	NM_004766,NR_023350,NM_020191	chr3,chr3,chr3	-,-,+	COPB2,COPB2,MRPS22	-1155,-1155,-46867
chr6:138184164-138185109	chr6	+	138184166	138184862	True	NM_006290,NM_022121	chr6,chr6	+,-	TNFAIP3,PERP	3718,243848
chr17:27895761-27896047	chr17	+	27895866	27896060	True	NM_138349,NM_198147	chr17,chr17	+,-	TP53I13,ABHD15	-178,-1824
chr2:130806299-130807598	chr2	+	130806537	130806967	True	NR_026758,NM_032144	chr2,chr2	-,+	LOC440905,RAB6C	1787,-69353
chr8:12231983-12232519	chr8	+	12231982	12232534	True	NR_024044,NR_026789	chr8,chr8	-,+	DEFB109P1,FAM66A	25390,-12505
chr14:32741479-32741811	chr14	+	32741479	32741789	True	NR_027263,NM_004274	chr14,chr14	-,+	C14orf128,AKAP6	-195574,56689
chr12:58166731-58167301	chr12	+	58166785	58167196	True	NM_000785,NM_005371,NM_023033,NM_015433,NM_001172695,NM_001172696,NM_001172697,NM_206914,NM_005726	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,-,-,+,+,+,+,+,+	CYP27B1,METTL1,METTL1,METTL21B,TSFM,TSFM,TSFM,METTL21B,TSFM	-5809,-871,-871,-453,9331,9331,9331,-453,9331
chr17:31618376-31618669	chr17	+	31618391	31618601	True	NM_183377,NM_173847	chr17,chr17	-,+	ACCN1,SPACA3	1455,-299560
chr10:133747320-133747769	chr10	+	133747358	133747796	True	NM_018461,NM_004052,NR_033191	chr10,chr10,chr10	+,-,+	PPP2R2D,BNIP3,PPP2R2D	163,47689,163
chr16:27417307-27419068	chr16	+	27417808	27418728	True	NM_181078,NM_181079,NR_037158	chr16,chr16,chr16	+,+,-	IL21R,IL21R,LOC283888	-4376,-4376,46036
chr2:145038646-145039558	chr2	+	145038743	145039337	True	NM_001006636,NR_033870	chr2,chr2	-,+	GTDC1,DKFZp686O1327	12773,386196
chr13:38444263-38444464	chr13	+	38444307	38444461	True	NM_016179,NM_003306,NM_001135956,NM_001135957,NM_001135955,NM_016617,NM_001135958	chr13,chr13,chr13,chr13,chr13,chr13,chr13	-,-,-,-,-,+,-	TRPC4,TRPC4,TRPC4,TRPC4,TRPC4,UFM1,TRPC4	-368,-368,-368,-368,-368,479480,-368
chr7:2280930-2281230	chr7	+	2280975	2281263	True	NM_003550,NM_198954,NM_002452,NM_198952,NM_198950,NM_013393,NM_001013836,NM_001013837,NM_198948,NM_198949,NM_198953	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,+,-,-,-,+,+,+	MAD1L1,NUDT1,NUDT1,NUDT1,NUDT1,FTSJ2,MAD1L1,MAD1L1,NUDT1,NUDT1,NUDT1	-8392,1276,593,632,632,620,-8392,-8392,593,593,1276
chr19:10738641-10739762	chr19	+	10739247	10739615	True	NM_020428,NR_024333	chr19,chr19	+,-	SLC44A2,LOC147727	-3127,24983
chr17:21187449-21187662	chr17	+	21187482	21187666	True	NM_152914,NM_145109,NM_002756	chr17,chr17,chr17	-,+,+	C17orf103,MAP2K3,MAP2K3	-30904,301,3681
chr16:1495433-1495633	chr16	+	1495490	1495554	True	NM_001143980,NM_016111	chr16,chr16	-,+	CCDC154,TELO2	-1000,47797
chr17:7144058-7144753	chr17	+	7144167	7144787	True	NM_203415,NM_004422,NM_007278,NM_024297	chr17,chr17,chr17,chr17	+,-,-,-	C17orf81,DVL2,GABARAP,PHF23	10584,-6304,1016,-1342
chr21:36419282-36419618	chr21	+	36419306	36419662	True	NR_024351,NR_026812,NM_001754	chr21,chr21,chr21	+,-,-	NCRNA00160,C21orf96,RUNX1	-323252,-7583,1983
chr7:111152485-111154411	chr7	+	111152578	111154133	True	NM_032549,NM_018334	chr7,chr7	-,+	IMMP2L,LRRN3	48273,-421579
chr7:134210145-134211229	chr7	+	134210288	134210925	True	NM_001628,NM_020299	chr7,chr7	-,+	AKR1B1,AKR1B10	-66400,1418
chr16:87525636-87525869	chr16	+	87525649	87525763	True	NM_022818,NM_015144	chr16,chr16	+,-	MAP1LC3B,ZCCHC14	-99899,-189
chr16:79795524-79796524	chr16	+	79795688	79796552	True	NM_005360,NM_130897	chr16,chr16	-,+	MAF,DYNLRB2	-161066,778301
chr20:62709623-62709938	chr20	+	62709650	62709718	True	NM_182647,NM_001007125,NM_001039467,NM_001200019,NM_000913,NM_005873	chr20,chr20,chr20,chr20,chr20,chr20	+,-,-,+,+,-	OPRL1,C20orf201,RGS19,OPRL1,OPRL1,RGS19	1752,6044,1656,6650,1752,1177
chr16:27078937-27079916	chr16	+	27079179	27079701	True	NM_145080,NM_001145545	chr16,chr16	-,+	NSMCE1,C16orf82	200462,-1011
chr10:76968812-76969320	chr10	+	76968815	76969162	True	NM_001184783,NM_001184823,NM_144589,NM_003375,NR_033675	chr10,chr10,chr10,chr10,chr10	+,+,-,+,+	VDAC2,VDAC2,COMTD1,VDAC2,VDAC2	1137,749,26659,1137,1137
chr4:670438-671382	chr4	+	670641	671431	True	NM_007100,NM_002477,NR_033743	chr4,chr4,chr4	-,+,-	ATP5I,MYL5,ATP5I	-2514,279,-2514
chr20:57209983-57210498	chr20	+	57210045	57210533	True	NM_153360,NM_001001433	chr20,chr20	-,+	APCDD1L,STX16	-120096,15775
chr19:3185367-3185770	chr19	+	3185399	3185779	True	NM_003775,NM_198969,NM_020170	chr19,chr19,chr19	+,-,+	S1PR4,AES,NCLN	-6718,-122435,95
chr10:102105465-102105695	chr10	+	102105529	102105739	True	NM_016112,NM_005063	chr10,chr10	-,+	PKD2L1,SCD	-15286,1032
chr15:56506880-56508726	chr15	+	56507049	56508261	True	NM_022841,NM_198524	chr15,chr15	-,+	RFX7,TEX9	27272,149382
chr5:137802133-137802350	chr5	+	137802236	137802370	True	NM_004730,NM_001964	chr5,chr5	-,+	ETF1,EGR1	76612,-1106
chr3:49756316-49756662	chr3	+	49756356	49756648	True	NM_013334,NM_198722,NM_021971,NM_022064	chr3,chr3,chr3,chr3	-,-,-,+	GMPPB,AMIGO3,GMPPB,RNF123	4786,640,4786,-29417
chr19:57968753-57969294	chr19	+	57968753	57969049	True	NM_020633,NM_001023561	chr19,chr19	-,+	VN1R1,ZNF749	-646,-22111
chr3:13975087-13975901	chr3	+	13975102	13975882	True	NR_036481,NM_004625,NR_002223	chr3,chr3,chr3	+,-,+	LOC100132526,WNT7A,TPRXL	-600,-53484,2924
chr9:132429736-132430006	chr9	+	132429767	132430045	True	NM_016307,NM_177999	chr9,chr9	+,-	PRRX2,ASB6	-1898,-25319
chr8:105351052-105352417	chr8	+	105351255	105352336	True	NM_001385,NM_030788	chr8,chr8	-,+	DPYS,TM7SF4	126991,-26
chr7:73497744-73497974	chr7	+	73497832	73497928	True	NM_002314,NM_001204426,NM_002914	chr7,chr7,chr7	+,+,-	LIMK1,LIMK1,RFC2	178,9557,170860
chr1:182640048-182640755	chr1	+	182640116	182640755	True	NM_001102450,NM_033345,NR_036490	chr1,chr1,chr1	-,-,+	RGS8,RGS8,LOC284648	1369,1369,-55892
chr14:61788814-61789153	chr14	+	61788830	61789082	True	NM_001017970,NM_006255	chr14,chr14	-,+	TMEM30B,PRKCH	-40300,-366
chr6:38564797-38566584	chr6	+	38564880	38566311	True	NM_152733,NM_001172418,NM_001371	chr6,chr6,chr6	-,-,+	BTBD9,BTBD9,DNAH8	-1037,-1037,124240
chr1:204806860-204807845	chr1	+	204806894	204807888	True	NM_001005389,NM_001005388,NM_001160332,NM_001160333,NM_201630,NM_015090	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,-,+	NFASC,NFASC,NFASC,NFASC,LRRN2,NFASC	-9163,-9163,-9163,-9163,-152297,-9163
chr5:140045441-140045701	chr5	+	140045566	140045688	True	NM_017706,NM_194249	chr5,chr5	+,-	WDR55,DND1	-1239,7533
chr9:68298966-68299209	chr9	+	68299061	68299121	True	NR_033907,NM_001012419	chr9,chr9	-,+	LOC642236,ANKRD20A3	155304,-372351
chr11:63743345-63743835	chr11	+	63743350	63743734	True	NM_017670,NM_004074,NM_173587,NR_003089	chr11,chr11,chr11,chr11	+,+,-,+	OTUB1,COX8A,RCOR2,OTUB1	9590,-1322,-59034,9590
chrY:24225448-24226189	chrY	+	24225472	24226163	True	NM_001002758,NR_001527	chrY,chrY	-,+	PRY2,TTTY6	16042,64948
chrY:24225448-24226189	chrY	-	28126529	28127220	False	NR_002179,NR_002176	chrY,chrY	-,+	TTTY17C,TTTY3B	-795609,-251944
chrY:24225448-24226189	chrY	+	25835149	25835840	False	NR_001524,NM_020363	chrY,chrY	-,+	TTTY3,DAZ2	251980,-469596
chrY:24225448-24226189	chrY	-	24652534	24653225	False	NM_004676,NR_001527	chrY,chrY	+,-	PRY,TTTY6	-16042,-64928
chr19:19932579-19932892	chr19	+	19932581	19932729	True	NM_001099269,NM_021047,NM_001145404	chr19,chr19,chr19	-,+,-	ZNF506,ZNF253,ZNF506	-21,43984,-21
chr4:123748878-123749204	chr4	+	123748886	123749184	True	NM_007083,NM_002006	chr4,chr4	-,+	NUDT6,FGF2	94625,-1074
chr1:205013159-205013849	chr1	+	205013232	205013898	True	NM_203376,NM_005076	chr1,chr1	-,+	TMEM81,CNTN2	39740,-943
chr2:55923254-55923468	chr2	+	55923307	55923390	True	NM_080667,NM_033109	chr2,chr2	+,-	CCDC104,PNPT1	-176630,-2296
chr7:99694691-99695237	chr7	+	99694860	99695184	True	NM_005916,NR_029831,NR_029498,NM_182776,NR_029510,NM_004722,NM_006833	chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,+,+	MCM7,MIR106B,MIR25,MCM7,MIR93,AP4M1,COPS6	4293,-3163,-3594,3246,-3390,3945,-8328
chr9:140096156-140096670	chr9	+	140096200	140096498	True	NM_001128228,NM_001144028,NM_001144026,NM_001144027,NM_053045,NM_014434	chr9,chr9,chr9,chr9,chr9,chr9	-,+,+,+,-,+	TPRN,NDOR1,NDOR1,NDOR1,TMEM203,NDOR1	-1037,3620,3620,3620,3642,3620
chr2:61301745-61302550	chr2	+	61301825	61302484	True	NM_032506,NM_144709,NM_001129993	chr2,chr2,chr2	+,-,+	KIAA1841,PUS10,KIAA1841	-8515,-56460,-8872
chr3:53081039-53081275	chr3	+	53081042	53081212	True	NM_016329,NM_006254,NM_001005158,NM_001005159	chr3,chr3,chr3,chr3	-,+,-,-	SFMBT1,PRKCD,SFMBT1,SFMBT1	-953,114010,-953,-1707
chr14:90085854-90087305	chr14	+	90085869	90087143	True	NR_024620,NM_001085471	chr14,chr14	+,-	PRO1768,FOXN3	-43360,-375
chr8:54771315-54772474	chr8	+	54771379	54772099	True	NM_170587,NM_213619	chr8,chr8	+,-	RGS20,ATP6V1H	-7062,-15529
chr1:44400663-44400866	chr1	+	44400665	44400853	True	NM_057090,NM_001136215,NM_006934,NM_057091	chr1,chr1,chr1,chr1	+,+,-,+	ARTN,ARTN,SLC6A9,ARTN	-1724,-1724,82194,-1724
chr15:41244986-41245358	chr15	+	41245055	41245217	True	NM_024111,NM_133639,NM_001142776	chr15,chr15,chr15	+,-,+	CHAC1,RHOV,CHAC1	418,-78568,418
chrX:1572595-1572974	chrY	+	1522595	1522961	False	NR_026711,NM_001173474,NM_001173473,NM_004192	chrY,chrY,chrY,chrY	+,-,-,-	ASMTL-AS1,ASMTL,ASMTL,ASMTL	-53222,-725,36,-725
chrX:1572595-1572974	chrX	+	1572595	1572961	True	NR_026711,NM_001173474,NM_001173473,NM_004192	chrX,chrX,chrX,chrX	+,-,-,-	ASMTL-AS1,ASMTL,ASMTL,ASMTL	-53222,-725,36,-725
chr10:81206727-81207226	chr10	+	81206735	81207116	True	NM_001099692,NM_153367	chr10,chr10	+,-	EIF5AL1,ZCCHC24	65240,-1352
chr11:94134730-94134936	chr11	+	94134760	94134984	True	NM_017704,NM_016540	chr11,chr11	+,-	ANKRD49,GPR83	92168,-175
chr11:71952867-71954038	chr11	+	71952985	71953663	True	NM_005169,NM_001567	chr11,chr11	-,+	PHOX2A,INPPL1	1607,-17161
chr1:14695521-14697271	chr1	+	14695550	14697125	True	NM_015209,NR_027136	chr1,chr1	+,-	KAZN,C1orf126	228087,781885
chr5:81036511-81038414	chr5	+	81036559	81038363	True	NM_001131028,NM_012446	chr5,chr5	+,-	ATG10,SSBP2	229480,8759
chr1:39342870-39343328	chr1	+	39343002	39343086	True	NR_037633,NR_037632,NR_037637,NR_037636,NR_037635,NR_037634,NM_012333,NM_030772,NM_001136275	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,-,-,-,+	GJA9-MYCBP,MYCBP,GJA9-MYCBP,GJA9-MYCBP,GJA9-MYCBP,GJA9-MYCBP,MYCBP,GJA9,AKIRIN1	4262,-3952,4262,4262,4262,4262,-3952,4262,113829
chr21:43300101-43300825	chr21	+	43300122	43300862	True	NM_022115,NR_027273,NM_001040424	chr21,chr21,chr21	-,+,-	PRDM15,C21orf121,PRDM15	-531,141250,-540
chr14:75174868-75175195	chr14	+	75175074	75175200	True	NM_015962,NM_001039479	chr14,chr14	+,-	FCF1,KIAA0317	4649,4657
chrX:101907014-101908280	chrX	+	101907075	101908257	True	NM_021992,NM_014710,NM_001099410,NM_001184727,NM_001099411	chrX,chrX,chrX,chrX,chrX	-,+,+,+,+	TMSB15A,GPRASP1,GPRASP1,GPRASP1,GPRASP1	-135376,-832,-832,-797,-832
chr20:37109672-37110135	chr20	+	37109722	37109837	True	NM_020336,NR_027241	chr20,chr20	+,-	RALGAPB,LOC388796	-8299,-45704
chr3:10325492-10326644	chr3	+	10325523	10326693	True	NM_001134941,NM_001134946,NM_001134944,NM_001134945,NR_026829,NR_024133,NR_024138,NR_004431,NM_016362,NR_024145,NR_024144,NR_024132,NR_024146,NR_024134,NR_024135,NR_024136,NR_024137	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,+,-,-,+,-,+,+,-,+,-,-,-,-	GHRL,GHRL,GHRL,GHRL,C3orf42,GHRL,GHRL,GHRLOS,GHRL,GHRLOS,GHRLOS,GHRL,GHRLOS,GHRL,GHRL,GHRL,GHRL	5776,7988,7988,7988,47,7988,7988,744,5776,744,744,7988,744,7988,7988,7988,7988
chr1:100813760-100814605	chr1	+	100814056	100814454	True	NM_033313,NM_033312,NM_001918,NM_003672	chr1,chr1,chr1,chr1	+,+,-,+	CDC14A,CDC14A,DBT,CDC14A	3568,3568,-98647,3568
chr17:76181696-76182386	chr17	+	76181926	76182383	True	NM_001010982,NR_027083,NM_001145526,NM_003258	chr17,chr17,chr17,chr17	+,+,+,-	AFMID,AFMID,AFMID,TK1	1014,1014,1014,955
chr4:6641085-6641357	chr4	+	6641084	6641163	True	NM_033296,NM_203462	chr4,chr4	+,-	MRFAP1,MRFAP1L1	1281,70498
chr3:184036784-184037368	chr3	+	184036980	184037178	True	NM_004953,NM_198244,NM_198242,NM_198241,NM_001194946,NM_001194947,NM_001171087,NR_003055,NM_182917	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,+,+,-,+,+	EIF4G1,EIF4G1,EIF4G1,EIF4G1,EIF4G1,EIF4G1,CLCN2,SNORD66,EIF4G1	922,-4748,-4748,-4748,-4748,-4748,42263,6305,-4079
chr22:37914359-37914653	chr22	+	37914423	37914655	True	NM_014550,NM_152243	chr22,chr22	-,+	CARD10,CDC42EP1	605,41815
chr22:29952435-29952829	chr22	+	29952530	29952739	True	NM_181825,NM_001002877,NM_001002878,NM_003678,NM_001002879	chr22,chr22,chr22,chr22,chr22	+,-,-,-,-	NF2,THOC5,THOC5,THOC5,THOC5	46805,-2794,-2886,-2794,-2886
chr22:36599677-36600249	chr22	+	36599705	36600217	True	NM_030643,NM_001136540,NM_145660	chr22,chr22,chr22	-,+,-	APOL4,APOL1,APOL4	712,48899,712
chr17:6616513-6616731	chr17	+	6616534	6616670	True	NM_177550,NM_001143838,NM_017523	chr17,chr17,chr17	-,-,+	SLC13A5,SLC13A5,XAF1	120,120,42485
chrX:149105814-149106116	chrX	+	149105817	149106087	True	NR_027456,NM_001013845	chrX,chrX	+,-	LOC100272228,CXorf40B	678,679
chr10:73079673-73080017	chr10	+	73079770	73080059	True	NM_001174098,NM_018344,NR_033414,NR_033413,NM_001164375	chr10,chr10,chr10,chr10,chr10	+,+,+,+,-	SLC29A3,SLC29A3,SLC29A3,SLC29A3,C10orf105	-821,-821,-821,-821,399574
chr3:57322471-57322901	chr3	+	57322531	57322695	True	NM_012096,NM_130387,NM_001142733	chr3,chr3,chr3	+,-,-	APPL1,ASB14,ASB14	-60817,-9551,4065
chr4:2866062-2867984	chr4	+	2866359	2867894	True	NM_176801,NM_001120	chr4,chr4	+,-	ADD1,MFSD10	-20826,68134
chr1:92419043-92419618	chr1	+	92419229	92419474	True	NM_207189,NM_001195684,NM_001726	chr1,chr1,chr1	+,-,+	BRDT,TGFBR3,BRDT	-4358,-47670,-1577
chr8:119945690-119947258	chr8	+	119945834	119947229	True	NM_002546,NM_006438	chr8,chr8	-,+	TNFRSF11B,COLEC10	17216,132194
chr20:31331589-31331812	chr20	+	31331588	31331762	True	NM_006892,NM_001099339,NM_053041	chr20,chr20,chr20	+,-,-	DNMT3B,COMMD7,COMMD7	18428,102,102
chr14:105485232-105485446	chr14	+	105485374	105485468	True	NM_017955,NM_174891,NM_145701	chr14,chr14,chr14	-,+,-	CDCA4,C14orf79,CDCA4	2007,-32817,2007
chr1:22110157-22110791	chr1	+	22110197	22110600	True	NM_001032730,NM_001013693,NM_032236	chr1,chr1,chr1	-,+,-	USP48,LDLRAD2,USP48	-509,28157,-509
chr20:49253205-49254894	chr20	+	49253293	49254773	True	NR_030375,NM_080829	chr20,chr20	+,-	MIR645,FAM65C	-51021,-21
chr1:116917077-116918434	chr1	+	116917167	116918450	True	NM_001160234,NM_000701,NM_001160233,NR_024126	chr1,chr1,chr1,chr1	+,+,+,-	ATP1A1,ATP1A1,ATP1A1,ATP1A1OS	7541,-1424,-730,42781
chr12:54656471-54657239	chr12	+	54656492	54657213	True	NM_002136,NM_001127322,NM_001127321	chr12,chr12,chr12	+,-,-	HNRNPA1,CBX5,CBX5	17274,-3163,-3122
chr15:25656237-25657270	chr15	+	25656261	25657285	True	NM_130838,NR_001295,NM_000462	chr15,chr15,chr15	-,+,-	UBE3A,SNORD109A,UBE3A	-5608,-132822,-2466
chr18:67969621-67969972	chr18	+	67969635	67969956	True	NM_173630,NM_004232	chr18,chr18	-,+	RTTN,SOCS6	-96673,-13549
chr1:152748989-152749576	chr1	+	152749196	152749586	True	NM_178353,NM_178351,NM_178354	chr1,chr1,chr1	+,-,+	LCE1E,LCE1C,LCE1F	9166,29571,-399
chr2:183989418-183989675	chr2	+	183989489	183989707	True	NM_138285,NM_205842	chr2,chr2	+,-	NUP35,NCKAP1	-457,-86260
chr9:72374595-72374896	chr9	+	72374758	72374832	True	NM_001099666,NM_001010940	chr9,chr9	-,+	PTAR1,C9orf135	94,60898
chr3:31581115-31583109	chr3	+	31581115	31582800	True	NM_178862,NM_001174060	chr3,chr3	+,-	STT3B,OSBPL10	-6682,440592
chr2:27501795-27502263	chr2	+	27501898	27502139	True	NM_003459,NM_173650,NM_187841,NM_032546	chr2,chr2,chr2,chr2	-,+,+,+	SLC30A3,DNAJC5G,TRIM54,TRIM54	-15938,-3667,3157,3157
chr10:5451352-5452642	chr10	+	5451470	5452639	True	NM_001047160,NM_001171864,NM_024803	chr10,chr10,chr10	+,-,-	NET1,TUBAL3,TUBAL3	1878,-4677,-4677
chr18:19335569-19336516	chr18	+	19335570	19336284	True	NM_138340,NM_020774	chr18,chr18	-,+	ABHD3,MIB1	-50804,-14080
chr7:106810316-106811808	chr7	+	106810459	106811342	True	NM_012257,NM_006348	chr7,chr7	+,-	HBP1,COG5	-1050,393667
chr14:77821696-77822156	chr14	+	77821894	77822202	True	NM_001010860,NM_213601	chr14,chr14	+,-	SAMD15,TMED8	21559,21244
chr18:12377445-12377659	chr18	+	12377616	12377688	True	NM_006796,NM_001142405	chr18,chr18	-,+	AFG3L2,SLMO1	-341,30206
chr15:75871878-75872645	chr15	+	75872034	75872473	True	NM_153271,NM_002833	chr15,chr15	+,-	SNX33,PTPN9	68874,-409
chr10:11076018-11076791	chr10	+	11076065	11076837	True	NR_024411,NM_006561	chr10,chr10	-,+	LOC254312,CELF2	-81939,-16232
chr9:33026118-33026443	chr9	+	33026145	33026420	True	NM_001539,NR_036577	chr9,chr9	+,-	DNAJA1,APTX	-987,-24506
chr10:47747338-47747614	chr10	+	47747507	47747631	True	NR_024495,NM_001630	chr10,chr10	-,+	LOC642826,ANXA8L2	-504013,-638
chr10:47747338-47747614	chr10	-	47173398	47173522	False	NM_001137549,NM_001137548,NM_005972,NM_001137556,NM_001098845,NM_001040084	chr10,chr10,chr10,chr10,chr10,chr10	-,-,+,-,-,-	FAM25G,FAM25C,PPYR1,FAM25B,ANXA8L1,ANXA8	8216,8216,-89915,8216,568,650
chr10:47747338-47747614	chr10	-	49199217	49199341	False	NM_001137549,NM_001137548,NM_002750,NM_001137556	chr10,chr10,chr10,chr10	-,-,+,-	FAM25G,FAM25C,MAPK8,FAM25B	8534,8534,410345,8534
chr10:47747338-47747614	chr10	+	48255824	48255948	False	NM_001137549,NM_001137548,NM_001137556,NM_001098845,NM_001040084,NM_002900	chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,-	FAM25G,FAM25C,FAM25B,ANXA8L1,ANXA8,RBP3	-8213,-8213,-8213,-568,-650,135093
chr20:32161579-32162353	chr20	+	32161872	32162073	True	NM_005093,NM_031231	chr20,chr20	+,-	CBFA2T2,NECAB3	-11755,100248
chr19:44598476-44598757	chr19	+	44598482	44598756	True	NR_033341,NM_013398	chr19,chr19	-,+	LOC100379224,ZNF224	18630,-51
chr7:50178867-50180185	chr7	+	50179206	50180166	True	NM_007009,NM_001161834	chr7,chr7	-,+	ZPBP,C7orf72	-46346,-43575
chr12:128894422-128895836	chr12	+	128894422	128895870	True	NM_145648,NR_037406	chr12,chr12	-,+	SLC15A4,MIR3612	412722,-115845
chr5:146430595-146431416	chr5	+	146430600	146431288	True	NM_145001,NM_181674,NM_181676	chr5,chr5,chr5	+,-,-	STK32A,PPP2R2B,PPP2R2B	183290,4462,4462
chr3:129724800-129725038	chr3	+	129724876	129724960	True	NM_007117,NR_024252	chr3,chr3	+,-	TRH,LOC729375	-31813,105366
chr19:751476-751677	chr19	+	751514	751576	True	NM_214710,NM_173481	chr19,chr19	-,+	PRSS57,C19orf21	-56053,-419
chr12:57880591-57880850	chr12	+	57880701	57880770	True	NM_032496,NM_004990,NM_001080157,NM_001080156	chr12,chr12,chr12,chr12	-,+,-,-	ARHGAP9,MARS,ARHGAP9,ARHGAP9	-7068,965,-7277,-8973
chr10:28035162-28035378	chr10	+	28035200	28035304	True	NM_021252,NM_173576	chr10,chr10	+,-	RAB18,MKX	-242002,-422
chr15:74833686-74834049	chr15	+	74833840	74833994	True	NM_006465,NM_201265	chr15,chr15	+,-	ARID3B,UBL7	-343,-80311
chr14:95943453-95944439	chr14	+	95943533	95944430	True	NM_016417,NM_152592	chr14,chr14	+,-	GLRX5,C14orf49	56892,-1360
chr17:29650040-29650285	chr17	+	29650040	29650148	True	NM_032932,NM_001003927,NM_014210,NM_006495	chr17,chr17,chr17,chr17	+,-,-,-	RAB11FIP4,EVI2A,EVI2A,EVI2B	68493,-1273,-1273,-8910
chr19:2151904-2152729	chr19	+	2151908	2152230	True	NM_001077523,NM_003938,NM_032482	chr19,chr19,chr19	-,-,+	AP3D1,AP3D1,DOT1L	-352,-352,11917
chr19:12203638-12204357	chr19	+	12203902	12204206	True	NM_001080404,NR_027049	chr19,chr19	-,+	ZNF878,ZNF788	-36775,-887
chr19:43576422-43576646	chr19	+	43576491	43576577	True	NR_036584,NM_031246	chr19,chr19	+,-	LOC100289650,PSG2	-250527,10366
chr14:24504688-24505488	chr14	+	24505059	24505493	True	NM_006177,NM_001082488	chr14,chr14	-,+	NRL,DHRS4L1	48389,216
chr1:44483769-44484188	chr1	+	44483827	44483921	True	NM_152499,NM_006934,NM_201649	chr1,chr1,chr1	+,-,-	CCDC24,SLC6A9,SLC6A9	-26598,-830,-830
chr6:164758635-164759627	chr6	+	164758783	164759548	True	NM_206855,NR_037593	chr6,chr6	+,-	QKI,LOC100526820	-923159,-923801
chr22:33453394-33453891	chr22	+	33453435	33453845	True	NM_000362,NM_001135774	chr22,chr22	+,-	TIMP3,SYN3	-256684,582
chr6:46293416-46293837	chr6	+	46293531	46293879	True	NM_005822,NM_014936	chr6,chr6	-,+	RCAN2,ENPP4	0,-195889
chr11:47290891-47291186	chr11	+	47290918	47291035	True	NM_130472,NM_130473,NM_130470,NM_130471,NM_130476,NM_130474,NM_130475,NM_003682,NM_001131064,NM_001135943,NM_001135944	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,+,+,+,-,+,+	MADD,MADD,MADD,MADD,MADD,MADD,MADD,MADD,ACP2,MADD,MADD	163,163,-42,163,635,163,635,163,-20461,635,163
chr9:130499243-130499497	chr9	+	130499431	130499541	True	NM_130459,NM_144965,NM_001085347,NM_001134430,NM_001134431	chr9,chr9,chr9,chr9,chr9	-,+,-,-,-	TOR2A,TTC16,TOR2A,TOR2A,TOR2A	-1827,-21124,-1827,-1827,-1827
chr21:39628677-39629547	chr21	+	39628712	39629563	True	NM_002243,NM_005867,NM_170736	chr21,chr21,chr21	+,-,+	KCNJ15,DSCR4,KCNJ15	-107,-135258,99
chr13:25338734-25339312	chr13	+	25338739	25339160	True	NM_018451,NM_001184993,NM_031277	chr13,chr13,chr13	-,+,+	CENPJ,RNF17,RNF17	157985,-489,-489
chr5:43040578-43040847	chr5	+	43040605	43040883	True	NM_001014279,NR_015447	chr5,chr5	-,+	C5orf39,LOC153684	-158,1352
chrX:134122753-134123676	chrX	+	134122757	134123712	True	NM_001163438,NM_001078173	chrX,chrX	+,-	LOC644538,FAM127C	1255,32904
chrX:41586073-41587919	chrX	+	41586075	41587690	True	NM_080817,NM_001126054	chrX,chrX	+,-	GPR82,CASK	-2724,194655
chr3:108563613-108564348	chr3	+	108563830	108564360	True	NM_032579,NM_016388	chr3,chr3	-,+	RETNLB,TRAT1	-87700,-22251
chr7:116963348-116963567	chr7	+	116963470	116963600	True	NR_002332,NR_024047,NM_003391	chr7,chr7,chr7	+,-,-	ST7OT3,WNT2,WNT2	-140786,-127,-127
chr1:112103319-112104501	chr1	+	112103403	112104517	True	NM_001081976,NM_001010935	chr1,chr1	-,+	ADORA3,RAP1A	2130,57887
chr20:53098001-53099329	chr20	+	53098096	53098942	True	NM_018431,NM_001128915	chr20,chr20	+,-	DOK5,CYP24A1	-5882,-307580
chrX:68726198-68726782	chrX	+	68726401	68726823	True	NM_145119,NM_015686	chrX,chrX	-,+	PJA1,FAM155B	-341036,-1374
chr4:166794544-166794893	chr4	+	166794721	166794931	True	NM_001204760,NR_026575,NM_012464	chr4,chr4,chr4	+,-,+	TLL1,GK3P,TLL1	-362,-593546,-362
chr10:35453388-35453870	chr10	+	35453561	35453681	True	NM_001198777,NM_182771,NM_182772	chr10,chr10,chr10	-,+,+	CUL2,CREM,CREM	-73991,2785,2785
chr12:100569886-100570494	chr12	+	100569966	100570265	True	NR_036632,NR_024261,NR_031728	chr12,chr12,chr12	-,-,+	GOLGA2B,GOLGA2B,MIR1827	-2845,-2845,13396
chr7:27206087-27206331	chr7	+	27206193	27206321	True	NM_152739,NR_029911,NM_006896,NR_002795,NM_018951	chr7,chr7,chr7,chr7,chr7	-,-,-,+,-	HOXA9,MIR196B,HOXA7,HOXA11-AS1,HOXA10	-1044,2911,-9897,18705,7684
chr12:6715055-6715328	chr12	+	6715126	6715360	True	NM_001273,NM_002046	chr12,chr12	-,+	CHD4,GAPDH	1241,-71520
chr9:131941591-131942526	chr9	+	131941595	131942468	True	NM_203434,NM_001193397	chr9,chr9	-,+	IER5L,PPP2R4	-1055,-67679
chrX:73638805-73639815	chrX	+	73638806	73639656	True	NM_006517,NR_028379	chrX,chrX	+,-	SLC16A2,MIR374AHG	1428,-125397
chr10:106026638-106028541	chr10	+	106026637	106028461	True	NM_001191013,NM_183239,NM_001191015,NM_001191014,NM_025145	chr10,chr10,chr10,chr10,chr10	+,+,+,+,-	GSTO2,GSTO2,GSTO2,GSTO2,WDR96	169,169,6425,6425,-34517
chrX:100183247-100183972	chrX	+	100183256	100183870	True	NM_212559,NM_001012990	chrX,chrX	-,+	XKRX,ARL13A	78,40826
chr1:23671284-23672055	chr1	+	23671325	23671879	True	NR_033690,NM_001102398,NM_001102399,NM_005826,NM_001102397	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	C1orf213,HNRNPR,HNRNPR,HNRNPR,HNRNPR	23584,-472,-472,-472,-472
chr15:74042781-74043449	chr15	+	74042821	74043413	True	NM_025240,NM_001039614	chr15,chr15	+,-	CD276,C15orf59	-66250,453
chr11:65658187-65658454	chr11	+	65658275	65658493	True	NM_198897,NM_004214,NM_006848,NM_005438	chr11,chr11,chr11,chr11	-,-,+,-	FIBP,FIBP,CCDC85B,FOSL1	-2265,-2265,-451,9554
chr7:138344620-138346221	chr7	+	138344652	138346163	True	NM_174959,NM_001085429	chr7,chr7	-,+	SVOPL,TMEM213	2863,136575
chr9:112189075-112189547	chr9	+	112189137	112189591	True	NR_026918,NM_001037293,NM_001145371,NM_001145372	chr9,chr9,chr9,chr9	-,+,-,-	PTPN3,PALM2,PTPN3,PTPN3	-9074,213476,1788,1788
chr9:34725480-34726426	chr9	+	34725698	34726442	True	NM_004512,NM_001141917	chr9,chr9	+,-	IL11RA,C9orf144B	-71817,3143
chr9:34725480-34726426	chr9	+	34834996	34835046	False	NR_024481,NM_015297	chr9,chr9	-,+	C9orf144,KIAA1045	3587,123145
chr8:145635052-145635266	chr8	+	145635239	145635315	True	NR_031600,NM_130849,NM_017767,NM_174922,NM_013291	chr8,chr8,chr8,chr8,chr8	-,-,-,+,-	MIR1234,SLC39A4,SLC39A4,ADCK5,CPSF1	-9680,7008,6652,-37559,-506
chr9:39739547-39741372	chr9	+	39740102	39741414	True	NR_003528,NM_001085452	chr9,chr9	-,+	LOC653501,FAM75A1	-275576,143560
chr9:39739547-39741372	chr9	+	39210884	39211748	False	NM_033655,NM_001085452	chr9,chr9	-,+	CNTNAP3,FAM75A1	76602,143950
chr22:20193395-20193992	chr22	+	20193399	20193939	True	NR_026919,NR_031618	chr22,chr22	+,-	LOC150197,MIR1286	-39,42845
chr1:101702359-101702616	chr1	+	101702433	101702659	True	NM_001400,NM_015958	chr1,chr1	+,-	S1PR1,DPH5	-179,-211071
chr6:83775018-83775308	chr6	+	83775017	83775292	True	NM_001199942,NM_015018,NM_198920	chr6,chr6,chr6	+,+,-	DOPEY1,DOPEY1,UBE2CBP	2092,2092,304
chr14:39681270-39683181	chr14	+	39681538	39682828	True	NM_177452,NM_054024	chr14,chr14	-,+	TRAPPC6B,MIA2	-41904,20296
chr7:137775305-137775880	chr7	+	137775471	137775846	True	NM_005989,NM_194071	chr7,chr7	+,-	AKR1D1,CREB3L2	-14345,-88625
chr9:33955371-33956620	chr9	+	33955858	33956675	True	NR_003685,NR_003690	chr9,chr9	-,+	SNORD121A,SNORD121B	-3006,-21640
chr12:33053052-33054266	chr12	+	33053061	33054021	True	NM_001005242,NM_004572,NM_012063	chr12,chr12,chr12	-,-,+	PKP2,PKP2,DNM1L	-3281,-3281,-220975
chr6:130508006-130508329	chr6	+	130508226	130508378	True	NM_032438,NM_152552	chr6,chr6	+,-	L3MBTL3,SAMD3	-168557,28166
chr8:144974229-144974528	chr8	+	144974343	144974539	True	NM_000837,NM_031308	chr8,chr8	+,-	GRINA,EPPK1	89686,-26909
chr14:55368413-55368732	chr14	+	55368423	55368637	True	NM_001024070,NM_001024071,NM_001024024,NM_000161,NM_080867	chr14,chr14,chr14,chr14,chr14	-,-,-,-,+	GCH1,GCH1,GCH1,GCH1,SOCS4	955,955,955,955,125206
chr2:64235402-64236540	chr2	+	64235657	64236280	True	NM_006759,NM_016516,NM_001005739	chr2,chr2,chr2	+,-,-	UGP2,VPS54,VPS54	-166694,9985,9985
chr2:219475744-219476480	chr2	+	219475797	219476281	True	NM_020935,NM_032726	chr2,chr2	-,+	USP37,PLCD4	-42713,-3361
chr3:197908533-197909898	chr3	+	197908746	197908826	True	NR_003291,NM_001145248	chr3,chr3	-,+	LOC348840,FAM157A	-101204,-29560
chr6:134372357-134373534	chr6	+	134372492	134373478	True	NM_004865,NM_145176	chr6,chr6	+,-	TBPL1,SLC2A12	-98242,361
chr3:172851289-172851843	chr3	+	172851317	172851905	True	NM_014932,NM_031955	chr3,chr3	+,-	NLGN1,SPATA16	264338,7216
chr17:26924027-26925603	chr17	+	26924591	26925442	True	NM_003170,NM_006461	chr17,chr17	+,-	SUPT6H,SPAG5	63859,675
chr19:39832747-39832996	chr19	+	39832925	39833023	True	NM_018028,NM_004877	chr19,chr19	+,-	SAMD4B,GMFG	84,-6199
chr2:101618345-101618697	chr2	+	101618470	101618732	True	NM_001098577,NM_000993,NM_001099693,NM_001102426	chr2,chr2,chr2,chr2	+,+,+,-	RPL31,RPL31,RPL31,TBC1D8	-42,-42,-42,149164
chr15:90317551-90318490	chr15	+	90317579	90318014	True	NM_001039958,NM_018670	chr15,chr15	+,-	MESP2,MESP1	1574,-23039
chr18:48082557-48083959	chr18	+	48082761	48083955	True	NM_002747,NM_001127175	chr18,chr18	+,-	MAPK4,MRO	2528,262529
chr19:1811516-1812044	chr19	+	1811573	1811887	True	NR_031730,NR_034114,NM_138813,NM_001178002	chr19,chr19,chr19,chr19	-,+,-,-	MIR1909,LOC100288123,ATP8B3,ATP8B3	4400,10200,433,362
chr5:148033056-148033499	chr5	+	148033071	148033455	True	NM_000024,NM_000870	chr5,chr5	+,-	ADRB2,HTR4	172700,334
chr1:171811297-171811594	chr1	+	171811450	171811632	True	NR_033704,NM_001136127,NM_015569	chr1,chr1,chr1	-,+,+	VAMP4,DNM3,DNM3	-100071,-880,-880
chr7:95002029-95002765	chr7	+	95002092	95002740	True	NM_145872,NM_000940	chr7,chr7	+,-	ASB4,PON3	112472,22997
chr16:29580989-29581548	chr16	+	29581091	29581153	True	NM_001030288,NR_002473	chr16,chr16	+,-	SPN,LOC440354	93146,-3551
chr3:51424939-51426453	chr3	+	51425279	51426469	True	NM_001171904,NM_006010,NM_013286	chr3,chr3,chr3	-,+,+	VPRBP,MANF,RBM15B	107601,-2638,2229
chr15:40212390-40212790	chr15	+	40212462	40212790	True	NM_007223,NM_001013703	chr15,chr15	-,+	GPR176,EIF2AK4	353,13556
chr2:228337749-228339069	chr2	+	228337891	228339116	True	NM_024795,NM_001135187,NM_001135189,NM_001135188,NM_004504	chr2,chr2,chr2,chr2,chr2	-,+,+,+,+	TM4SF20,AGFG1,AGFG1,AGFG1,AGFG1	-93869,-1055,-1055,-1055,-1055
chr17:8242451-8244430	chr17	+	8243193	8244091	True	NR_024447,NM_153007	chr17,chr17	-,+	LOC100128288,ODF4	19818,-58
chr11:73887866-73888416	chr11	+	73888174	73888245	True	NM_015531,NM_016147	chr11,chr11	-,+	C2CD3,PPME1	-6110,-5861
chr4:49317553-49318562	chr4	+	49318287	49318359	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-330080,-409472
chr1:18088738-18088980	chr1	+	18088746	18089008	True	NM_018715,NM_030812	chr1,chr1	-,+	RCC2,ACTL8	-322526,-6989
chr21:43786995-43788075	chr21	+	43787064	43787967	True	NM_003225,NM_001001895	chr21,chr21	-,+	TFF1,UBASH3A	-420,36051
chr14:104093549-104093765	chr14	+	104093557	104093758	True	NM_005552,NM_182923,NM_001130107,NM_001015048	chr14,chr14,chr14,chr14	+,+,+,-	KLC1,KLC1,KLC1,BAG5	1766,1766,1766,-64406
chr19:52526512-52528149	chr19	+	52526792	52527898	True	NM_024840,NM_025040	chr19,chr19	+,-	ZNF613,ZNF614	-96155,3832
chr3:170071869-170073302	chr3	+	170072179	170073327	True	NM_001145098,NM_001145097,NM_024947,NM_005414	chr3,chr3,chr3,chr3	+,+,-,+	SKIL,SKIL,PHC3,SKIL	2145,4083,-172642,2145
chr13:20139642-20140547	chr13	+	20139642	20140418	True	NM_199254,NM_017520	chr13,chr13	-,+	TPTE2,MPHOSPH8	-28739,67369
chr10:22725991-22726206	chr10	+	22725994	22726244	True	NM_172242,NR_036533	chr10,chr10	+,-	SPAG6,LOC100499489	-91646,664
chr3:108223546-108225227	chr3	+	108223571	108225178	True	NM_014648,NM_014981	chr3,chr3	+,-	DZIP3,MYH15	83158,23045
chr1:28501878-28503600	chr1	+	28501877	28503632	True	NM_016311,NM_001164723,NM_000952	chr1,chr1,chr1	+,-,-	ATPIF1,PTAFR,PTAFR	58969,8,45
chr11:17409981-17410204	chr11	+	17410141	17410221	True	NM_000525,NM_001202439,NM_001166290	chr11,chr11,chr11	-,+,-	KCNJ11,DKFZp686O24166,KCNJ11	35,-36883,707
chr1:22978905-22980127	chr1	+	22979125	22980098	True	NM_000491,NR_036214,NM_001114101,NM_172369	chr1,chr1,chr1,chr1	+,-,+,+	C1QB,MIR4253,C1QC,C1QC	79,209671,-9059,-9059
chr16:31192042-31192393	chr16	+	31192061	31192203	True	NM_004960,NM_001170937,NM_013258,NM_001170634,NR_028388	chr16,chr16,chr16,chr16,chr16	+,+,-,+,+	FUS,FUS,PYCARD,FUS,FUS	-681,-681,21944,-681,-681
chr7:150654904-150655145	chr7	+	150654936	150655090	True	NM_172057,NM_000603,NM_001204798	chr7,chr7,chr7	-,+,-	KCNH2,NOS3,KCNH2	-2019,33053,-2019
chr5:134985136-134986153	chr5	+	134985264	134986064	True	NM_145282,NR_027127	chr5,chr5	+,-	SLC25A48,LOC340074	184300,3610
chr1:2488529-2488839	chr1	+	2488528	2488772	True	NR_037844,NR_026927,NM_003820	chr1,chr1,chr1	-,-,+	LOC100133445,LOC115110,TNFRSF14	-78,-4244,-774
chr17:39598428-39600289	chr17	+	39598603	39600235	True	NM_030975,NM_006771	chr17,chr17	+,-	KRTAP9-9,KRT38	-187018,-1007
chr18:660243-660677	chr18	+	660295	660599	True	NM_001071,NM_001012716	chr18,chr18	+,-	TYMS,C18orf56	-2742,-1955
chr19:40931076-40931279	chr19	+	40931075	40931267	True	NM_020971,NM_013376	chr19,chr19	+,-	SPTBN4,SERTAD1	41858,715
chr11:20619429-20619808	chr11	+	20619490	20619655	True	NM_001029865,NM_004211	chr11,chr11	-,+	DBX1,SLC6A5	-437620,1290
chr22:50962660-50963340	chr22	+	50962930	50963288	True	NM_005138,NM_001953,NM_001169111,NM_001169110,NM_001014440,NM_152299,NM_001169109,NM_001113755,NM_001113756	chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,-,+,-,-,-	SCO2,TYMP,SCO2,SCO2,ODF3B,NCAPH2,SCO2,TYMP,TYMP	796,5276,795,1336,7770,-16336,1630,5276,5020
chr2:178064915-178065390	chr2	+	178064946	178065282	True	NM_194247,NR_036075	chr2,chr2	+,-	HNRNPA3,MIR3128	12139,55510
chr17:79320624-79321416	chr17	+	79320892	79321221	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	52318,-16418
chr11:77778461-77778821	chr11	+	77778531	77778841	True	NM_001203260,NM_003251	chr11,chr11	-,+	NDUFC2-KCTD14,THRSP	12474,-3675
chr1:45985799-45986250	chr1	+	45985945	45986123	True	NM_181696,NM_002574,NM_001202431,NM_015506,NM_181697	chr1,chr1,chr1,chr1,chr1	-,-,-,+,-	PRDX1,PRDX1,PRDX1,MMACHC,PRDX1	1537,1537,2489,-20140,1537
chr4:23884780-23885773	chr4	+	23884893	23885800	True	NM_003102,NM_013261	chr4,chr4	+,-	SOD3,PPARGC1A	911284,5951
chr14:23354211-23355272	chr14	+	23354404	23355070	True	NM_001077351,NM_173527	chr14,chr14	-,+	RBM23,REM2	33376,-2023
chr7:2373960-2375003	chr7	+	2374537	2375003	True	NM_001037283,NM_013321	chr7,chr7	+,-	EIF3B,SNX8	19470,-20438
chrX:15568164-15569763	chrX	+	15568454	15569751	True	NM_001721,NM_021804	chrX,chrX	+,-	BMX,ACE2	-43074,50498
chr19:52078560-52079696	chr19	+	52078719	52079252	True	NM_007147,NR_034159	chr19,chr19	+,-	ZNF175,FLJ30403	-4246,18431
chr8:133846198-133846872	chr8	+	133846197	133846926	True	NM_003235,NM_144649	chr8,chr8	+,-	TG,TMEM71	32278,-73283
chr11:107876782-107877509	chr11	+	107877079	107877299	True	NM_017515,NM_003478	chr11,chr11	-,+	SLC35F2,CUL5	-147165,2108
chr20:61640104-61640338	chr20	+	61640220	61640280	True	NM_080606,NR_033370	chr20,chr20	-,+	BHLHE23,LOC63930	-1833,454
chr7:100137626-100138557	chr7	+	100137682	100138119	True	NM_006076,NM_001168682	chr7,chr7	+,-	AGFG2,SAP25	-912,33201
chr19:51816012-51817528	chr19	+	51816296	51816779	True	NM_001163922,NM_001101372	chr19,chr19	-,+	VSIG10L,IGLON5	28662,-1245
chr1:24128056-24129615	chr1	+	24128348	24129493	True	NM_001008216,NM_000403,NM_007260,NM_001127621	chr1,chr1,chr1,chr1	-,-,+,-	GALE,GALE,LYPLA2,GALE	-1054,-1314,-10762,-2288
chr1:159410276-159411735	chr1	+	159410373	159411593	True	NM_012351,NM_001004469	chr1,chr1	+,-	OR10J1,OR10J5	-912,94256
chr1:28449786-28450599	chr1	+	28450011	28450480	True	NR_027268,NM_016311	chr1,chr1	-,+	LOC653566,ATPIF1	-26942,112121
chr16:4588814-4589540	chr16	+	4588853	4589382	True	NM_001199055,NM_001199054,NM_013399,NM_001199056,NM_001145011	chr16,chr16,chr16,chr16,chr16	-,-,-,-,+	C16orf5,C16orf5,C16orf5,C16orf5,LOC342346	-37,-382,-37,-37,17108
chr17:41624245-41625819	chr17	+	41624655	41625677	True	NM_001079675,NM_004941,NM_001986	chr17,chr17,chr17	-,+,-	ETV4,DHX8,ETV4	-893,-63372,-1350
chr16:89754441-89754783	chr16	+	89754440	89754832	True	NM_001098533,NM_001160367,NM_052987,NR_027702,NR_027703,NM_152339,NM_052988	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,-,+	CDK10,CDK10,CDK10,CDK10,CDK10,SPATA2L,CDK10	-1415,-1415,-1415,-1415,-1415,13339,-1415
chr17:9695125-9695409	chr17	+	9695129	9695457	True	NM_001105571,NM_004246	chr17,chr17	-,+	DHRS7C,GLP2R	-528,33923
chr5:55404177-55405767	chr5	+	55404275	55405317	True	NM_139017,NM_175767	chr5,chr5	+,-	IL31RA,IL6ST	-256992,-113454
chr10:23983067-23983425	chr10	+	23983072	23983358	True	NM_153714,NM_001098500	chr10,chr10	-,+	C10orf67,KIAA1217	-349300,316
chr10:51743629-51744051	chr10	+	51743946	51744068	True	NM_001077665,NM_006327	chr10,chr10	+,-	AGAP6,TIMM23	4009,-120610
chr10:51743629-51744051	chr10	-	75461493	75461867	False	NM_001144000,NM_004922	chr10,chr10	-,+	AGAP5,SEC24C	-3939,42263
chr10:51743629-51744051	chr10	-	46347251	46347339	False	NM_133446,NM_015262	chr10,chr10	-,+	AGAP4,FAM21C	-4330,-124654
chr10:51743629-51744051	chr10	-	51250865	51250953	False	NM_001077686,NM_002443	chr10,chr10	-,+	AGAP8,MSMB	-4330,298599
chr1:235663703-235665471	chr1	+	235663968	235664912	True	NM_003193,NM_152490	chr1,chr1	+,-	TBCE,B3GALNT2	-133291,2919
chr10:50326286-50326909	chr10	+	50326300	50326850	True	NM_144984,NM_001135196,NM_001031746	chr10,chr10,chr10	-,+,-	C10orf72,C10orf71,C10orf72	-2741,180336,-2741
chr1:9713286-9714758	chr1	+	9713297	9714579	True	NR_027045,NM_005026	chr1,chr1	-,+	C1orf200,PIK3CD	115,-1558
chr10:94055408-94055754	chr10	+	94055457	94055537	True	NM_017824,NM_014912	chr10,chr10	+,-	MARCH5,CPEB3	-4588,-4582
chr3:13976531-13977403	chr3	+	13976612	13977402	True	NR_036481,NM_004625,NR_002223	chr3,chr3,chr3	+,-,+	LOC100132526,WNT7A,TPRXL	-2110,-54994,1404
chr7:149472932-149473274	chr7	+	149473034	149473196	True	NM_207336,NM_198455	chr7,chr7	-,+	ZNF467,SSPO	-2739,30
chr7:135417363-135418253	chr7	+	135417481	135418035	True	NM_001130929,NM_012450	chr7,chr7	+,-	PL-5283,SLC13A4	-70321,-4548
chr19:2476646-2476991	chr19	+	2476676	2476964	True	NM_032737,NM_015675	chr19,chr19	-,+	LMNB2,GADD45B	-19718,-604
chr8:145150524-145150773	chr8	+	145150526	145150806	True	NM_001916,NM_030974,NM_032272	chr8,chr8,chr8	+,-,+	CYC1,SHARPIN,MAF1	-617,8384,8498
chr2:27711831-27712623	chr2	+	27711972	27712662	True	NM_022823,NM_015662,NM_001486	chr2,chr2,chr2	-,-,+	FNDC4,IFT172,GCKR	5514,39,7043
chr12:6615629-6616711	chr12	+	6616053	6616471	True	NM_016497,NR_004387	chr12,chr12	-,+	MRPL51,SCARNA10	-13582,2916
chr1:223115282-223117086	chr1	+	223115354	223116694	True	NM_032890,NM_003268	chr1,chr1	+,-	DISP1,TLR5	-126985,199980
chr1:160681722-160682464	chr1	+	160681743	160682178	True	NM_001778,NM_021181	chr1,chr1	-,+	CD48,SLAMF7	-158,26898
chr2:219856633-219856838	chr2	+	219856640	219856732	True	NM_057093,NM_057094,NM_017521,NR_024385,NR_029867,NM_005209	chr2,chr2,chr2,chr2,chr2,chr2	-,-,-,+,-,-	CRYBA2,CRYBA2,FEV,LOC151300,MIR375,CRYBA2	1445,1445,-6261,-15685,9748,1439
chr19:46002453-46002940	chr19	+	46002468	46002970	True	NM_003370,NM_005619,NM_206900,NM_001080401,NM_206901	chr19,chr19,chr19,chr19,chr19	+,-,-,+,-	VASP,RTN2,RTN2,PPM1N,RTN2	7717,-2157,-2155,-788,-5994
chr3:129165351-129166446	chr3	+	129165488	129166260	True	NM_052985,NM_052989,NM_018262,NM_003925,NM_052990	chr3,chr3,chr3,chr3,chr3	+,+,+,-,+	IFT122,IFT122,IFT122,MBD4,IFT122	-6571,-6571,-6571,-6636,-6571
chr11:63870397-63870937	chr11	+	63870604	63870810	True	NM_013280,NM_014067	chr11,chr11	+,-	FLRT1,MACROD1	551,62825
chr11:118394693-118396099	chr11	+	118394847	118396115	True	NM_001144038,NM_001144035,NM_001144034,NM_001144037,NM_001144036,NM_001080441,NM_001168618,NM_032780	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,+,-,+	TMEM25,TMEM25,TMEM25,TMEM25,TMEM25,TTC36,IFT46,TMEM25	5687,5687,5687,5687,5687,2094,40726,5687
chr14:52451396-52451859	chr14	+	52451443	52451897	True	NM_007361,NM_016039	chr14,chr14	-,+	NID2,C14orf166	84099,4330
chr16:4895661-4895924	chr16	+	4895684	4895810	True	NM_001079514,NM_016936,NM_032569	chr16,chr16,chr16	+,+,-	UBN1,UBN1,GLYR1	2101,6266,1551
chr1:24124003-24124205	chr1	+	24124185	24124253	True	NM_001008216,NM_000403,NM_007260,NM_001127621	chr1,chr1,chr1,chr1	-,-,+,-	GALE,GALE,LYPLA2,GALE	3091,2831,-6590,1857
chr19:58893362-58894101	chr19	+	58893529	58893859	True	NM_138466,NM_001009,NM_001129730	chr19,chr19,chr19	-,+,-	ZNF837,RPS5,ZNF837	-1140,4776,-1140
chr12:8322707-8324423	chr12	+	8323096	8324203	True	NM_001004328,NR_026788,NR_036440	chr12,chr12,chr12	+,+,-	ZNF705A,FAM66C,POU5F1P3	946,8601,-35648
chr12:8322707-8324423	chr11	-	71534348	71534422	False	NR_029192,NM_001002035	chr11,chr11	-,+	LOC100133315,DEFB108B	105135,9823
chr12:8322707-8324423	chr4	-	9392571	9392631	False	NR_031688,NR_027279	chr4,chr4	-,+	MIR548I2,USP17L6P	165364,-23028
chr12:8322707-8324423	chr8	+	12210040	12210104	False	NM_001195257,NR_026789	chr8,chr8	-,+	LOC100133267,FAM66A	-34215,9423
chr12:8322707-8324423	chr8	+	11963799	11963865	False	NR_003275,NR_027425	chr8,chr8	-,+	LOC392196,FAM66D	22995,9425
chr12:8322707-8324423	chr8	+	7803043	7803107	False	NR_003668,NR_027424	chr8,chr8	-,+	DEFB109P1B,FAM66E	52000,9427
chr12:8322707-8324423	chr8	-	7222301	7222361	False	NR_027423,NM_001164457,NR_003668	chr8,chr8,chr8	-,-,+	FAM66B,ZNF705G,DEFB109P1B	-9425,-1811,-51990
chr11:3533169-3534471	chr11	+	3533190	3534041	True	NM_053017,NR_002720	chr11,chr11	-,+	ART5,TRPC2	129499,113672
chr15:76031592-76033477	chr15	+	76031618	76033288	True	NM_175881,NR_024595	chr15,chr15	+,-	ODF3L1,DNM1P35	-15350,-114
chrX:144905497-144906430	chrX	+	144905678	144906456	True	NM_004709,NM_032539,NM_001144010,NM_001144003,NM_001144004,NM_001144005,NM_001144006,NR_030589,NM_001144008,NM_001144009	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,+,+,-,+,+	CXorf1,SLITRK2,SLITRK2,SLITRK2,SLITRK2,SLITRK2,SLITRK2,MIR890,SLITRK2,SLITRK2	2471,-6383,-2864,-6383,-6383,-6383,-2864,169463,-2864,-2864
chr10:12170696-12170914	chr10	+	12170728	12170920	True	NM_018144,NR_024576,NR_024577,NM_014142,NM_001142628,NM_001142627	chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,-,+,+	SEC61A2,SEC61A2,SEC61A2,NUDT5,SEC61A2,SEC61A2	719,719,719,67273,719,719
chr12:8392773-8393183	chr12	+	8393022	8393104	True	NR_024254,NR_026788	chr12,chr12	-,+	LOC653113,FAM66C	2488,-60275
chr2:162165457-162166386	chr2	+	162165524	162166316	True	NM_001935,NM_005805	chr2,chr2	-,+	DPP4,PSMD14	764794,-790
chr18:28968367-28968844	chr18	+	28968442	28968707	True	NM_177986,NM_024421	chr18,chr18	+,-	DSG4,DSC1	-11764,-225623
chr14:65383059-65383588	chr14	+	65383090	65383634	True	NM_001202559,NM_001202558,NM_002083,NM_001204063,NM_001204064,NM_145165	chr14,chr14,chr14,chr14,chr14,chr14	+,+,-,+,+,+	CHURC1-FNTB,CHURC1-FNTB,GPX2,CHURC1,CHURC1,CHURC1	-2071,-2071,25947,-2071,-2071,-2071
chr8:28244162-28244456	chr8	+	28244349	28244491	True	NM_018660,NM_006228	chr8,chr8	-,+	ZNF395,PNOC	-372,-69751
chr2:223520830-223521071	chr2	+	223520841	223521070	True	NM_058165,NM_005687	chr2,chr2	+,-	MOGAT1,FARSB	15386,-14
chr9:35755490-35757038	chr9	+	35755870	35756870	True	NM_020944,NM_001080496,NM_001044264	chr9,chr9,chr9	-,+,-	GBA2,RGP1,MSMP	-6645,-6651,-1596
chr20:43589120-43591060	chr20	+	43589488	43590848	True	NM_006809,NM_006282	chr20,chr20	-,+	TOMM34,STK4	-374,4271
chr1:38472169-38472479	chr1	+	38472171	38472506	True	NM_004468,NM_016037	chr1,chr1	-,+	FHL3,UTP11L	-937,5877
chr7:6415261-6415972	chr7	+	6415340	6415792	True	NM_006908,NM_018890,NM_001037163	chr7,chr7,chr7	+,+,-	RAC1,RAC1,C7orf70	-1265,-1265,-26750
chr14:57856395-57857006	chr14	+	57856489	57856995	True	NM_018168,NM_001011713	chr14,chr14	-,+	C14orf105,NAA30	103631,275
chr1:229750169-229751078	chr1	+	229750189	229750811	True	NM_014409,NM_014777	chr1,chr1	-,+	TAF5L,URB2	11041,11169
chr1:957621-957942	chr1	+	957626	957980	True	NM_005101,NM_001142467,NM_198576	chr1,chr1,chr1	+,-,+	ISG15,HES4,AGRN	-8830,-22074,-2174
chr19:11484867-11485405	chr19	+	11484914	11485372	True	NM_000121,NM_175871,NR_033663	chr19,chr19,chr19	-,+,-	EPOR,C19orf39,EPOR	9696,10,9696
chr10:129533440-129534342	chr10	+	129533461	129534214	True	NM_207426,NM_152311	chr10,chr10	+,-	FOXI2,CLRN3	1323,157047
chr3:123344120-123344576	chr3	+	123344119	123344383	True	NM_053032,NM_012430,NM_053031	chr3,chr3,chr3	-,+,-	MYLK,SEC22A,MYLK	-4589,-423403,-4589
chrX:97840534-97842430	chrX	+	97840850	97842451	True	NR_024608,NM_013347	chrX,chrX	-,+	LOC442459,RPA4	1352447,-1702002
chr22:25417844-25418109	chr22	+	25418039	25418147	True	NM_001001663,NM_001145206	chr22,chr22	-,+	TMEM211,KIAA1671	-82725,5793
chr11:33097661-33097913	chr11	+	33097669	33097955	True	NR_015451,NM_001326	chr11,chr11	+,-	NCRNA00294,CSTF3	-24,85132
chr3:5160623-5160899	chr3	+	5160718	5160880	True	NR_037903,NM_018184	chr3,chr3	-,+	LOC100507582,ARL8B	-212532,3049
chr3:5160623-5160899	chr3	-	5961711	5961875	False	NM_014674,NR_037903	chr3,chr3	+,-	EDEM1,LOC100507582	-732409,-1013525
chrY:6776944-6777486	chrY	+	6776976	6777472	True	NM_001143,NM_134259,NM_134258,NM_033284	chrY,chrY,chrY,chrY	-,+,+,+	AMELY,TBL1Y,TBL1Y,TBL1Y	-34908,1254,1254,1254
chr22:24307431-24308202	chr22	+	24307497	24308115	True	NM_000854,NM_001080843,NM_001084393,NM_001084392	chr22,chr22,chr22,chr22	-,-,+,-	GSTT2,GSTT2B,DDTL,DDT	-4104,-4129,910,8615
chr22:24307431-24308202	chr22	-	24317590	24318209	False	NM_001084393,NM_001355,NM_000854,NM_001084392	chr22,chr22,chr22,chr22	+,-,+,-	DDTL,DDT,GSTT2,DDT	-8615,3861,4104,-910
chr15:94905452-94907091	chr15	+	94905714	94907115	True	NM_001159644,NR_034095	chr15,chr15	+,-	MCTP2,LOC400456	-6601,963264
chr6:28500821-28501877	chr6	+	28500916	28501827	True	NM_001509,NM_182701,NM_003996	chr6,chr6,chr6	+,-,+	GPX5,GPX6,GPX5	-7182,-17346,-7182
chr6:28500821-28501877	chr6_cox_hap2	+	23120	24031	False	NM_001509,NM_052923,NM_003996	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,-,+	GPX5,SCAND3,GPX5	-7182,53336,-7182
chr13:21350096-21350650	chr13	+	21350268	21350479	True	NM_138284,NM_174928	chr13,chr13	+,-	IL17D,N6AMT2	-72849,-2211
chr2:237077618-237077928	chr2	+	237077664	237077914	True	NM_020311,NM_001485	chr2,chr2	+,-	CXCR7,GBX2	400465,-1012
chr1:156676275-156676523	chr1	+	156676279	156676569	True	NM_001199723,NM_001878,NM_001142560	chr1,chr1,chr1	-,-,+	CRABP2,CRABP2,RRNAD1	-671,-820,21693
chr12:104354145-104354767	chr12	+	104354204	104354803	True	NM_003211,NM_001135570	chr12,chr12	+,-	TDG,C12orf73	4789,-3211
chr19:10223020-10223540	chr19	+	10223090	10223326	True	NM_002566,NM_031917,NM_003755,NM_001198690,NR_003688,NR_004381,NM_001040664,NM_020230	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,-,+,+,+,+,+	P2RY11,ANGPTL6,EIF3G,PPAN-P2RY11,SNORD105B,SNORD105,PPAN-P2RY11,PPAN	-944,-9665,7323,-6242,-2716,-4814,-6242,-6242
chr11:93582962-93583251	chr11	+	93582969	93583295	True	NM_001144871,NM_004268	chr11,chr11	-,+	C11orf90,MED17	423,-65615
chr7:72301034-72301870	chr7	+	72301165	72301532	True	NR_001588,NR_024110,NR_024111,NR_024109,NM_001145441,NM_001145440	chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,-,-	SBDSP1,SBDSP1,SBDSP1,SBDSP1,TYW1B,TYW1B	-1276,-1276,-1276,-1276,-2352,-2352
chr7:72301034-72301870	chr7	-	66459372	66459434	False	NM_018264,NM_016038	chr7,chr7	+,-	TYW1,SBDS	2382,1216
chr14:20902425-20903057	chr14	+	20902712	20903058	True	NM_001109997,NM_001641	chr14,chr14	-,+	KLHL33,APEX1	793,20231
chr3:47019238-47020189	chr3	+	47019314	47019924	True	NM_144716,NM_015175	chr3,chr3	-,+	CCDC12,NBEAL2	-1044,1248
chr22:21021551-21021850	chr22	+	21021571	21021859	True	NM_002650,NR_024592	chr22,chr22	-,+	PI4KA,POM121L4P	67148,21983
chr12:491551-491812	chr12	+	491707	491821	True	NM_001042603,NM_001130147,NM_001130148	chr12,chr12,chr12	-,+,+	KDM5A,CCDC77,CCDC77	6853,6694,6694
chrX:150153190-150153932	chrX	+	150153382	150153876	True	NM_005342,NM_134446	chrX,chrX	+,-	HMGB3,CD99L2	-1670,-86093
chr3:48489206-48490538	chr3	+	48489229	48490374	True	NM_130384,NM_024661,NM_015933,NM_032166	chr3,chr3,chr3,chr3	+,-,+,+	ATRIP,CCDC51,CCDC72,ATRIP	-1062,-7700,-7594,-1062
chr2:55504413-55505070	chr2	+	55504568	55504885	True	NR_027258,NM_001005369,NM_002453	chr2,chr2,chr2	+,-,-	PRORSD1P,MTIF2,MTIF2	4569,-8253,-8184
chr8:98785760-98786291	chr8	+	98786084	98786326	True	NR_002581,NM_018407	chr8,chr8	-,+	SNORA72,LAPTM4B	268169,1482
chr12:117176077-117176318	chr12	+	117176118	117176328	True	NM_001109903,NM_032814,NM_024738	chr12,chr12,chr12	+,+,-	RNFT2,RNFT2,C12orf49	-73,-73,-275
chr7:140180479-140180905	chr7	+	140180615	140180915	True	NM_013446,NM_001008749,NM_001145125	chr7,chr7,chr7	-,+,-	MKRN1,RAB19,MKRN1	-1246,-76840,-1246
chr15:78592163-78592809	chr15	+	78592253	78592343	True	NM_025234,NM_001130183	chr15,chr15	-,+	WDR61,DNAJA4	-313,-33755
chr10:14997557-14998911	chr10	+	14997711	14998687	True	NM_001080836,NM_001033858,NM_022487,NM_001033857,NM_001033855	chr10,chr10,chr10,chr10,chr10	+,-,-,-,-	MEIG1,DCLRE1C,DCLRE1C,DCLRE1C,DCLRE1C	2750,-1617,-1617,-1617,-1617
chr8:41348781-41349906	chr8	+	41348839	41349781	True	NM_001174124,NM_016099,NM_152568,NM_001002296	chr8,chr8,chr8,chr8	+,+,-,+	GOLGA7,GOLGA7,NKX6-3,GOLGA7	-809,-809,155155,-717
chr13:98829648-98830088	chr13	+	98830033	98830137	True	NM_178861,NR_036129	chr13,chr13	-,+	RNF113B,MIR3170	-512,30640
chr2:3642201-3642502	chr2	+	3642227	3642367	True	NM_199235,NM_002936,NM_024027	chr2,chr2,chr2	+,-,+	COLEC11,RNASEH1,COLEC11	269,-36287,269
chr7:143580079-143581612	chr7	+	143580251	143581653	True	NM_014719,NM_001004685	chr7,chr7	-,+	FAM115A,OR2F2	17569,50672
chr12:125346824-125347727	chr12	+	125346826	125347756	True	NM_005505,NM_080626,NM_001082959	chr12,chr12,chr12	-,+,-	SCARB1,BRI3BP,SCARB1	813,130437,813
chr9:69261519-69261961	chr9	+	69261809	69261993	True	NM_001085457,NM_001098805	chr9,chr9	-,+	CBWD6,ANKRD20A4	650,119987
chr9:69261519-69261961	chr9	+	70489502	70489574	False	NM_001024916,NM_201453	chr9,chr9	-,-	CBWD5,CBWD3	647,653
chr9:69261519-69261961	chr9	-	70857441	70857625	False	NR_015423,NM_201453	chr9,chr9	-,+	LOC572558,CBWD3	115182,-653
chr17:72615392-72616330	chr17	+	72615478	72616128	True	NM_152460,NM_181449	chr17,chr17	+,-	C17orf77,CD300E	-34472,3819
chr12:101196999-101198242	chr12	+	101197022	101197690	True	NM_145913,NM_178826	chr12,chr12	-,+	SLC5A8,ANO4	406384,-8699
chr11:12028392-12029547	chr11	+	12028454	12029546	True	NM_013253,NM_014632,NM_015881,NM_001018057	chr11,chr11,chr11,chr11	-,+,-,-	DKK3,MICAL2,DKK3,DKK3	1421,102591,1133,690
chr12:51441441-51441662	chr12	+	51441443	51441691	True	NM_001174125,NM_015416,NM_001024668	chr12,chr12,chr12	-,+,+	SLC11A2,LETMD1,LETMD1	-19385,392,392
chr20:34000845-34001718	chr20	+	34000943	34001289	True	NM_018244,NM_199487,NM_007186,NM_001184977	chr20,chr20,chr20,chr20	-,-,+,-	UQCC,UQCC,CEP250,UQCC	-998,-998,41933,-998
chr16:30546058-30546311	chr16	+	30546114	30546314	True	NM_023931,NM_024671,NM_002209	chr16,chr16,chr16	-,-,+	ZNF747,ZNF768,ITGAL	38,-8204,-62182
chr1:206274028-206275325	chr1	+	206274300	206275306	True	NM_001910,NM_001007544	chr1,chr1	+,-	CTSE,C1orf186	42152,13391
chr9:91932288-91933346	chr9	+	91932333	91933393	True	NM_016848,NM_001827,NR_036108,NM_024077	chr9,chr9,chr9,chr9	-,+,+,+	SHC3,CKS2,MIR3153,SECISBP2	-138651,-6271,-5244,18
chr1:62208783-62210498	chr1	+	62209132	62210413	True	NM_176877,NM_032027	chr1,chr1	+,-	INADL,TM2D1	-1034,-18037
chr15:25073616-25074686	chr15	+	25073789	25074629	True	NM_022807,NM_022806,NM_130838,NM_022808	chr15,chr15,chr15,chr15	+,+,-,+	SNRPN,SNRPN,UBE3A,SNRPN	-5047,-5047,576074,-5047
chr1:17638317-17638674	chr1	+	17638427	17638648	True	NM_001136204,NM_012387	chr1,chr1	-,+	RCC2,PADI4	126462,-3790
chr10:97052957-97054344	chr10	+	97053059	97054052	True	NM_207321,NM_020992	chr10,chr10	+,-	C10orf129,PDLIM1	-99162,-2278
chr18:21454553-21454986	chr18	+	21454601	21454827	True	NM_000227,NM_173505,NM_001127718	chr18,chr18,chr18	+,-,+	LAMA3,ANKRD29,LAMA3	-1668,-211752,-1668
chr19:44949015-44949694	chr19	+	44949058	44949718	True	NM_001205280,NM_014518	chr19,chr19	+,-	LOC147710,ZNF229	167221,2997
chr6:138971595-138972765	chr6	+	138971632	138972809	True	NM_020464,NR_033896	chr6,chr6	-,+	NHSL1,FLJ46906	-77964,39995
chr9:39462550-39463436	chr9	+	39462565	39463213	True	NM_001040065,NR_003528	chr9,chr9	+,-	FAM75A2,LOC653501	-106917,1371
chr9:39462550-39463436	chr9	+	41607583	41608231	False	NM_001113541,NR_003528	chr9,chr9	+,-	FAM75A5,LOC653501	-106955,1371
chr9:39462550-39463436	chr9	+	40790155	40790803	False	NR_026801,NM_033160	chr9,chr9	+,-	FAM74A3,ZNF658	-74682,1367
chr12:52445909-52446349	chr12	+	52445913	52446361	True	NM_002135,NM_173157,NM_001081492	chr12,chr12,chr12	+,+,-	NR4A1,NR4A1,KRT80	-778,-778,139473
chr5:1798915-1799489	chr5	+	1798985	1799429	True	NM_004553,NM_032479	chr5,chr5	+,-	NDUFS6,MRPL36	2066,577
chr2:232395564-232396171	chr2	+	232395964	232396168	True	NM_006056,NM_152614	chr2,chr2	-,+	NMUR1,C2orf57	-782,61406
chr2:179188680-179188972	chr2	+	179188723	179188979	True	NM_001139518,NM_145739	chr2,chr2	-,+	PRKRA,OSBPL6	126426,-3804
chr5:78362410-78363054	chr5	+	78362509	78363072	True	NM_013391,NM_001178005,NM_017614	chr5,chr5,chr5	-,+,+	DMGDH,BHMT2,BHMT2	2434,2474,2474
chr2:75426365-75426733	chr2	+	75426513	75426679	True	NM_015727,NM_019896,NM_001058	chr2,chr2,chr2	-,+,-	TACR1,POLE4,TACR1	16,-240789,16
chr8:21990051-21990502	chr8	+	21990117	21990537	True	NM_005144,NM_001172357,NM_018411,NM_025232	chr8,chr8,chr8,chr8	-,+,-,-	HR,SFTPC,HR,REEP4	-1552,28646,-1552,8961
chr19:18432917-18433669	chr19	+	18432917	18433660	True	NM_017712,NM_012321	chr19,chr19	+,-	PGPEP1,LSM4	17747,391
chr19:3606582-3606930	chr19	+	3606582	3606898	True	NM_001060,NM_133261,NM_201636	chr19,chr19,chr19	-,+,-	TBXA2R,GIPC3,TBXA2R	-13,-21064,-13
chr8:42248040-42248911	chr8	+	42248149	42248749	True	NM_014420,NM_001135694,NM_005662	chr8,chr8,chr8	-,+,+	DKK4,VDAC3,VDAC3	-13475,596,596
chr21:28218739-28218947	chr21	+	28218768	28218834	True	NM_006988,NR_024357	chr21,chr21	-,+	ADAMTS1,NCRNA00113	-1040,875863
chrX:47372302-47372630	chr6	-	117997070	117997150	False	NM_020399,NM_138459	chr6,chr6	-,+	GOPC,NUS1	-73365,-504
chrX:47372302-47372630	chrX	+	47372311	47372645	True	NM_001654,NM_153380	chrX,chrX	+,-	ARAF,ZNF41	47870,-29966
chr12:54495232-54495956	chr12	+	54495240	54496004	True	NR_026657,NR_026658	chr12,chr12	+,-	LOC100240734,LOC100240735	0,-19633
chr2:110863423-110864837	chr2	+	110863528	110864757	True	NM_005434,NR_037626	chr2,chr2	-,+	MALL,LOC100507334	9436,138457
chr5:137369198-137369543	chr5	+	137369277	137369569	True	NM_016603,NM_001101801,NM_001101800,NR_037900	chr5,chr5,chr5,chr5	-,-,-,+	FAM13B,FAM13B,FAM13B,LOC100130172	-475,-475,-475,-865
chr12:75601709-75601912	chr12	+	75601718	75601844	True	NM_153748,NM_152779,NM_139136,NM_139137	chr12,chr12,chr12,chr12	-,+,-,-	KCNC2,GLIPR1L1,KCNC2,KCNC2	1717,126618,1717,1717
chr5:160974558-160974788	chr5	+	160974601	160974737	True	NM_000811,NM_021911,NM_000813	chr5,chr5,chr5	+,-,-	GABRA6,GABRB2,GABRB2	137920,443,443
chr6:31782877-31783313	chr6_qbl_hap6	+	3076625	3077009	False	NM_005345,NM_005527,NM_021177	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	+,-,-	HSPA1A,HSPA1L,LSM2	-14,-143,-8245
chr6:31782877-31783313	chr6_dbb_hap3	+	3068565	3068949	False	NM_005345,NM_005527,NM_021177	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	+,-,-	HSPA1A,HSPA1L,LSM2	-14,-143,-8239
chr6:31782877-31783313	chr6	+	31782978	31783362	True	NM_005345,NM_005527,NM_021177	chr6,chr6,chr6	+,-,-	HSPA1A,HSPA1L,LSM2	-14,-143,-8235
chr6:31782877-31783313	chr6_apd_hap1	+	3097739	3098123	False	NM_005345,NM_005527,NM_021177	chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1	+,-,-	HSPA1A,HSPA1L,LSM2	-14,-143,-8245
chr6:31782877-31783313	chr6_cox_hap2	+	3292558	3292942	False	NM_005345,NM_005527,NM_021177	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,-,-	HSPA1A,HSPA1L,LSM2	-14,-143,-8244
chr15:74898552-74898892	chr15	+	74898551	74898929	True	NM_001130028,NM_003992,NM_001142443	chr15,chr15,chr15	+,+,-	CLK3,CLK3,EDC3	8405,1783,89507
chr21:44739793-44740651	chr21	+	44739801	44740387	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	129516,106665
chr8:7957329-7957736	chr8	+	7957734	7957784	True	NR_031689,NR_024362	chr8,chr8	-,+	MIR548I3,FLJ10661	-11123,128307
chr8:7957329-7957736	chr8	-	7044761	7044811	False	NR_027000,NM_001164452	chr8,chr8	-,+	LOC349196,FAM90A14	76253,69614
chr2:70995404-70995605	chr2	+	70995592	70995652	True	NM_017482,NM_001617,NM_017488,NM_001185054,NM_001185055,NM_012476	chr2,chr2,chr2,chr2,chr2,chr2	-,-,-,-,-,+	ADD2,ADD2,ADD2,ADD2,ADD2,VAX2	-217,-217,-217,-745,-217,132067
chr15:49464706-49464961	chr15	+	49464742	49465004	True	NM_004236,NM_002044	chr15,chr15	-,+	COPS2,GALK2	-16888,-2378
chr20:25231359-25232666	chr20	+	25231365	25232693	True	NR_027091,NM_002862	chr20,chr20	-,+	LOC284798,PYGB	-101939,-2721
chr18:19281407-19283395	chr18	+	19281731	19283281	True	NM_138340,NR_031565	chr18,chr18	-,+	ABHD3,MIR320C1	1536,-18311
chr3:113794514-113795104	chr3	+	113794668	113794952	True	NM_020817,NM_024638	chr3,chr3	-,+	KIAA1407,QTRTD1	-19208,-19110
chr2:120438540-120438839	chr2	+	120438622	120438820	True	NM_001105199,NM_001105198,NM_002980,NM_030577	chr2,chr2,chr2,chr2	+,+,-,+	TMEM177,TMEM177,SCTR,TMEM177	-1930,-1930,-156594,-1930
chr7:149155840-149156519	chr7	+	149155961	149156515	True	NM_015694,NR_036573	chr7,chr7	-,+	ZNF777,LOC155060	1588,-173640
chr20:62528247-62529916	chr20	+	62528371	62529907	True	NM_025219,NR_031735	chr20,chr20	+,-	DNAJC5,MIR1914	-1973,43040
chr2:131675646-131676080	chr2	+	131675659	131676063	True	NM_032995,NM_015320,NM_001009993	chr2,chr2,chr2	+,+,-	ARHGEF4,ARHGEF4,FAM168B	-1492,-1492,174991
chr2:179341936-179343333	chr2	+	179341996	179343249	True	NM_019091,NM_001135212,NM_181342	chr2,chr2,chr2	+,-,-	PLEKHA3,FKBP7,FKBP7	1949,156,156
chr2:160641644-160643138	chr2	+	160641832	160643193	True	NM_022826,NM_001198763	chr2,chr2	+,-	MARCH7,CD302	-72880,11630
chr3:119918348-119918660	chr3	+	119918370	119918688	True	NM_001168271,NM_001168331	chr3,chr3	-,+	GPR156,NDUFB4	44504,396439
chr16:30407352-30407694	chr16	+	30407480	30407720	True	NM_152652,NM_052838	chr16,chr16	+,-	ZNF48,SEPT1	-474,-13309
chr11:803198-803458	chr11	+	803235	803457	True	NM_145887,NM_145886,NM_024698,NM_001191060,NM_001191061,NM_001004,NR_002585	chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,-,+,+	LRDD,LRDD,SLC25A22,SLC25A22,SLC25A22,RPLP2,SNORA52	1843,1843,-6972,-5240,-4966,6478,8223
chr15:30318059-30318450	chr15	+	30318066	30318317	True	NR_026859,NM_175610	chr15,chr15	+,-	FAM7A3,TJP1	77617,-203360
chr11:65234183-65235185	chr11	+	65234767	65235229	True	NR_030343,NM_182556	chr11,chr11	+,-	MIR612,SLC25A45	-22899,-84625
chr5:145317274-145317680	chr5	+	145317284	145317710	True	NM_152550,NM_001080516	chr5,chr5	+,-	SH3RF2,GRXCR2	-1209,-64753
chr17:17110571-17111718	chr17	+	17110613	17111558	True	NM_178836,NM_020201	chr17,chr17	-,+	PLD6,NT5M	-967,95121
chrX:70504341-70505025	chrX	+	70504546	70505015	True	NM_007363,NM_001171162,NM_001145410,NM_001145409,NM_001145408	chrX,chrX,chrX,chrX,chrX	+,-,+,+,+	NONO,ZMYM3,NONO,NONO,NONO	-1555,-29499,-1555,-1555,-1555
chr3:14692907-14693262	chr3	+	14692919	14693261	True	NM_016474,NM_001080423	chr3,chr3	+,-	C3orf19,GRIP2	-9,-109331
chr3:49464608-49465507	chr3	+	49465128	49465350	True	NR_028435,NM_022171,NM_000481,NM_032316,NM_001164712,NM_001164710,NM_001164711	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-,-	AMT,TCTA,AMT,NICN1,AMT,AMT,AMT	-5017,-15540,-5017,1459,-5017,-5017,-5017
chr1:17249581-17250267	chr1	+	17249637	17250174	True	NM_014675,NM_001135248	chr1,chr1	+,-	CROCC,MFAP2	-1243,57054
chr17:74302457-74303156	chr17	+	74302530	74303112	True	NM_032134,NM_182565	chr17,chr17	-,+	QRICH2,FAM100B	699,-41295
chr15:36882704-36883067	chr15	+	36882712	36883100	True	NM_001130010,NR_027320	chr15,chr15	+,-	C15orf41,CSNK1A1P1	-10951,227657
chr19:9647663-9648933	chr19	+	9647880	9648958	True	NM_024106,NM_001172651	chr19,chr19	-,+	ZNF426,ZNF177	395,-160951
chr9:116166952-116167522	chr9	+	116167082	116167370	True	NR_027261,NM_017443,NM_152786,NM_000031	chr9,chr9,chr9,chr9	-,-,+,-	POLE3,POLE3,C9orf43,ALAD	5643,5717,5651,-3464
chr14:51413799-51414816	chr14	+	51413888	51414815	True	NM_181814,NM_002863,NM_001163940	chr14,chr14,chr14	+,-,-	ABHD12B,PYGL,PYGL	-75066,-2640,-2640
chr8:27943470-27944162	chr8	+	27944003	27944135	True	NM_018091,NM_001010906	chr8,chr8	+,-	ELP3,C8orf80	6448,-2615
chr11:119077730-119077939	chr11	+	119077742	119077916	True	NM_001145018,NM_005188	chr11,chr11	-,+	CCDC153,CBL	-11158,-803
chr20:30105287-30105879	chr20	+	30105334	30105728	True	NM_001037500,NM_178582,NM_178580,NM_030789,NM_178581	chr20,chr20,chr20,chr20,chr20	-,+,+,+,+	DEFB124,HM13,HM13,HM13,HM13	-44518,-3145,-3145,-3145,-3145
chr6:137143988-137144252	chr6	+	137144090	137144196	True	NM_000288,NM_005923	chr6,chr6	+,-	PEX7,MAP3K5	-439,-30434
chr17:40930292-40931994	chr17	+	40930585	40932037	True	NR_024462,NM_032353,NM_032387	chr17,chr17,chr17	-,+,+	LOC100190938,VPS25,WNK4	-17310,-5182,611
chrX:122315865-122316911	chrX	+	122315901	122316957	True	NM_007325,NM_000828,NM_001081550	chrX,chrX,chrX	+,+,-	GRIA3,GRIA3,THOC2	1138,1138,549997
chr22:21738795-21739043	chr22	+	21738864	21739050	True	NM_001128635,NR_003700,NM_001128633	chr22,chr22,chr22	+,-,+	RIMBP3B,PI4KAP2,RIMBP3C	-875,132780,-1252
chr22:21738795-21739043	chr22	-	20460398	20460584	False	NM_015672,NR_026919	chr22,chr22	-,+	RIMBP3,LOC150197	1252,-266594
chr22:21738795-21739043	chr22	-	21904362	21904548	False	NM_001128635,NM_003347,NM_001128633	chr22,chr22,chr22	-,+,-	RIMBP3B,UBE2L3,RIMBP3C	875,17408,1252
chr7:107217789-107219227	chr7	+	107217838	107219184	True	NR_027830,NM_001161520,NM_018844,NM_001008405	chr7,chr7,chr7,chr7	+,-,+,+	BCAP29,COG5,BCAP29,BCAP29	1237,-12879,1237,2019
chr2:55495243-55496092	chr2	+	55495595	55496139	True	NM_001005369,NR_027258,NM_002453	chr2,chr2,chr2	-,+,-	MTIF2,PRORSD1P,MTIF2	226,13315,295
chr20:31365609-31365864	chr20	+	31365637	31365862	True	NM_175850,NM_053041	chr20,chr20	+,-	DNMT3B,COMMD7	1795,-33823
chr20:42936649-42937725	chr20	+	42936951	42937592	True	NM_178491,NM_001080472	chr20,chr20	+,-	R3HDML,FITM2	28033,2348
chr15:64791795-64792078	chr15	+	64791794	64792094	True	NM_015042,NM_014736	chr15,chr15	+,-	ZNF609,KIAA0101	-226,-118092
chr10:73611089-73611319	chr10	+	73611100	73611332	True	NM_001042466,NM_001042465,NM_002778,NM_001171936	chr10,chr10,chr10,chr10	-,-,-,+	PSAP,PSAP,PSAP,CDH23	-18,-18,-18,-39511
chrX:55033132-55033399	chrX	+	55033316	55033420	True	NM_002625,NM_014481	chrX,chrX	-,+	PFKFB1,APEX2	-12805,-6587
chr19:40723540-40723930	chr19	+	40723543	40723925	True	NM_002446,NM_152479,NM_024877	chr19,chr19,chr19	+,-,-	MAP3K10,TTC9B,CNTD2	-25943,431,8722
chr2:105470425-105471100	chr2	+	105470447	105471124	True	NM_006236,NR_037883	chr2,chr2	+,-	POU3F3,LOC100506421	844,-2513
chr8:145702956-145703164	chr8	+	145703028	145703184	True	NM_003923,NM_145754	chr8,chr8	-,+	FOXH1,KIFC2	-1310,-11341
chr17:38718746-38720219	chr17	+	38718888	38720145	True	NM_001552,NM_001838	chr17,chr17	+,-	IGFBP4,CCR7	-119263,1642
chr6:99382197-99383385	chr6	+	99382300	99383250	True	NM_005604,NM_012160	chr6,chr6	+,-	POU3F2,FBXL4	-99779,12649
chr1:204916386-204918137	chr1	+	204916504	204917890	True	NM_203376,NM_001160331	chr1,chr1	-,+	TMEM81,NFASC	135751,-3201
chr2:208393158-208393374	chr2	+	208393193	208393347	True	NM_004379,NM_134442,NM_145280	chr2,chr2,chr2	+,+,-	CREB1,CREB1,METTL21A	1268,1268,96399
chr18:9608074-9609381	chr18	+	9608431	9609423	True	NM_006868,NM_005134,NM_001042388	chr18,chr18,chr18	+,-,-	RAB31,PPP4R1,PPP4R1	98804,5227,5227
chr5:176780153-176781055	chr5	+	176780273	176780918	True	NM_006816,NM_006480	chr5,chr5	-,+	LMAN2,RGS14	-1388,3925
chr19:15193843-15194571	chr19	+	15194264	15194404	True	NM_001004713,NM_006844	chr19,chr19	+,-	OR1I1,ILVBL	3472,42229
chr11:60524848-60525061	chr11	+	60524851	60524945	True	NM_152717,NM_001098835,NM_004778	chr11,chr11,chr11	+,+,-	MS4A15,MS4A15,GPR44	-562,-562,98549
chr9:139923850-139924445	chr9	+	139923977	139924483	True	NM_004479,NM_001606,NM_212533,NM_207511	chr9,chr9,chr9,chr9	-,-,-,+	FUT7,ABCA2,ABCA2,C9orf139	2859,-1237,-603,-2112
chr1:1407623-1408202	chr1	+	1407848	1408164	True	NR_026871,NM_031921	chr1,chr1	-,+	LOC441869,ATAD3B	-51198,-735
chr1:1407623-1408202	chr1	+	1448232	1448282	False	NM_001170536,NM_001170535,NM_018188,NM_001114748	chr1,chr1,chr1,chr1	+,+,+,-	ATAD3A,ATAD3A,ATAD3A,C1orf70	-373,-760,-760,27508
chr5:157171289-157172428	chr5	+	157171453	157172391	True	NM_173491,NM_178424	chr5,chr5	+,-	LSM11,SOX30	-749,-92025
chr8:37457804-37458464	chr8	+	37457918	37458496	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	94804,147118
chr3:105087771-105088240	chr3	+	105087848	105088189	True	NM_170662,NM_001627	chr3,chr3	-,+	CBLB,ALCAM	499748,-2186
chr11:70508610-70509023	chr11	+	70508741	70508896	True	NM_133266,NM_138565	chr11,chr11	-,+	SHANK2,CTTN	-818,-264180
chr22:30227762-30228224	chr22	+	30227796	30228156	True	NM_021090,NM_032204	chr22,chr22	+,-	MTMR3,ASCC2	51001,6148
chr5:152867442-152867695	chr5	+	152867504	152867718	True	NM_000827,NM_018691,NM_001114183	chr5,chr5,chr5	+,-,+	GRIA1,FAM114A2,GRIA1	2365,550829,2365
chr14:90720332-90720563	chr14	+	90720331	90720505	True	NM_017970,NM_002802	chr14,chr14	-,+	C14orf102,PSMC1	77824,2388
chr11:10772102-10772691	chr11	+	10772235	10772728	True	NM_014633,NR_004403	chr11,chr11	+,-	CTR9,SNORD97	82,50477
chr22:31357149-31358106	chr22	+	31357342	31357880	True	NM_014941,NR_002323	chr22,chr22	-,+	MORC2,TUG1	6357,7753
chr2:108603443-108604805	chr2	+	108603618	108604764	True	NR_024439,NM_021815	chr2,chr2	-,+	LOC729121,SLC5A7	-161035,-681
chr15:84322991-84323237	chr15	+	84322995	84323285	True	NM_207517,NM_001717	chr15,chr15	+,-	ADAMTSL3,BNC1	-208,-369527
chr15:30325998-30326253	chr15	+	30326050	30326226	True	NR_026859,NM_175610	chr15,chr15	+,-	FAM7A3,TJP1	69708,-211344
chr6:28296027-28297147	chr6	+	28296796	28297091	True	NM_024493,NR_024164,NR_024165,NM_030899,NM_001135216	chr6,chr6,chr6,chr6,chr6	+,-,-,-,-	ZKSCAN3,ZNF323,ZNF323,ZNF323,ZNF323	20599,6871,7112,7112,6871
chr3:45017618-45017856	chr3	+	45017757	45017847	True	NM_015004,NR_023353,NM_016598,NM_001135179	chr3,chr3,chr3,chr3	+,+,-,-	EXOSC7,EXOSC7,ZDHHC3,ZDHHC3	-67,-67,-83,-83
chr11:124734733-124735266	chr11	+	124734800	124735242	True	NM_022370,NM_019055	chr11,chr11	+,-	ROBO3,ROBO4	62,32639
chr6:14847279-14848068	chr6	+	14847492	14848106	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	398420,815233
chr6:144471796-144473202	chr6	+	144472118	144473231	True	NM_031287,NM_003764	chr6,chr6	-,+	SF3B5,STX11	-55364,-520
chr12:11800877-11801647	chr12	+	11801042	11801676	True	NM_001987,NM_006248	chr12,chr12	+,-	ETV6,PRB2	1111,-252544
chr10:133749742-133750475	chr10	+	133750018	133750386	True	NM_018461,NM_004052,NR_033191	chr10,chr10,chr10	+,-,+	PPP2R2D,BNIP3,PPP2R2D	-2110,45099,-2110
chr3:57996937-57997860	chr3	+	57996948	57997633	True	NM_001164317,NM_001457,NM_004944,NM_001164318,NM_001164319	chr3,chr3,chr3,chr3,chr3	+,+,-,+,+	FLNB,FLNB,DNASE1L3,FLNB,FLNB	-2872,-2872,202824,-2872,-2872
chr17:1556323-1557033	chr17	+	1556608	1556962	True	NM_001163673,NR_028075,NM_031430,NR_028076,NM_145352,NM_145350,NM_003693	chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,-,-,-,-	WDR81,SCARF1,RILP,SCARF1,SCARF1,SCARF1,SCARF1	62854,-7567,-3216,-7567,-7567,-7567,-7567
chr19:49535230-49535625	chr19	+	49535344	49535668	True	NR_024244,NM_033378,NM_033377,NR_004383,NM_000737	chr19,chr19,chr19,chr19,chr19	-,+,-,+,-	SNAR-G2,CGB2,CGB1,SNAR-G1,CGB	-300,-265,4573,4608,-7751
chr1:38324811-38325020	chr1	+	38324811	38324901	True	NM_198446,NM_005955	chr1,chr1	+,-	C1orf122,MTF1	-51389,441
chr7:142836082-142836568	chr7	+	142836161	142836485	True	NR_002140,NM_002652	chr7,chr7	-,+	OR6W1P,PIP	-75279,-7046
chr2:47052508-47052878	chr2	+	47052591	47052733	True	NR_034099,NR_024452,NM_001171506	chr2,chr2,chr2	+,+,-	LOC388948,LOC100134259,MCFD2	-8835,2269,90324
chr19:42807821-42809283	chr19	+	42807834	42808162	True	NM_199285,NM_173633,NM_002573,NM_001145939,NM_001145940	chr19,chr19,chr19,chr19,chr19	+,+,-,-,-	PRR19,TMEM145,PAFAH1B3,PAFAH1B3,PAFAH1B3	-1601,9314,-1038,-905,-882
chr12:45610053-45610294	chr12	+	45610064	45610149	True	NM_001142679,NR_037144,NM_001025356,NM_001142680,NM_001204803	chr12,chr12,chr12,chr12,chr12	+,-,+,+,+	ANO6,PLEKHA8P1,ANO6,ANO6,ANO6	-345,-275,-345,-239,-345
chr1:27225316-27226300	chr1	+	27225481	27226165	True	NM_018066,NM_022078,NM_006600	chr1,chr1,chr1	-,-,+	GPN2,GPATCH3,NUDC	-8612,847,22058
chr17:45060377-45060953	chr17	+	45060378	45060654	True	NM_203400,NM_054022	chr17,chr17	-,+	RPRML,GOSR2	-3764,-59944
chrX:40126712-40126989	chrX	+	40126931	40127011	True	NM_001123384,NM_005765	chrX,chrX	-,+	BCOR,ATP6AP2	-90349,313204
chr13:51916624-51917324	chr13	+	51916673	51917145	True	NM_001039937,NM_001101320	chr13,chr13	-,+	INTS6,SERPINE3	110180,-1556
chr16:71880526-71881925	chr16	+	71880717	71881854	True	NM_001201553,NM_001137675,NR_024612	chr16,chr16,chr16	-,+,+	ZNF821,ATXN1L,ATXN1L	35641,-869,-869
chr1:20123158-20124211	chr1	+	20123390	20123856	True	NM_015207,NM_181719	chr1,chr1	+,-	OTUD3,TMCO4	85031,2604
chr5:140263555-140264052	chr5	+	140263629	140264031	True	NM_031865,NM_031864,NM_002109,NM_018903,NM_018904	chr5,chr5,chr5,chr5,chr5	+,+,-,+,+	PCDHA13,PCDHA12,HARS,PCDHA12,PCDHA13	-1826,-8749,-192658,-8749,-1826
chr14:36003397-36003597	chr14	+	36003468	36003534	True	NM_032594,NM_020529	chr14,chr14	+,-	INSM2,NFKBIA	-271,-129508
chr3:196158453-196158653	chr3	+	196158622	196158684	True	NM_001105573,NM_015562	chr3,chr3	+,-	FBXO45,UBXN7	137040,711
chr1:227508370-227509788	chr1	+	227508812	227509449	True	NM_014826,NM_178549,NM_003607	chr1,chr1,chr1	-,+,-	CDC42BPA,ZNF678,CDC42BPA	-2986,241770,-2986
chr22:50609898-50610487	chr22	+	50610050	50610488	True	NR_027691,NM_052839,NM_001160300,NM_020461	chr22,chr22,chr22,chr22	+,+,+,-	PANX2,PANX2,PANX2,TUBGCP6	-941,-941,-941,72962
chr19:16828418-16829726	chr19	+	16828520	16829327	True	NM_001007525,NM_024104	chr19,chr19	+,-	NWD1,C19orf42	1459,-57552
chr15:23434864-23435335	chr15	+	23434901	23435365	True	NR_002824,NR_033350	chr15,chr15	-,+	HERC2P2,GOLGA8E	-56642,82
chr15:23434864-23435335	chr15	+	28623651	28623701	False	NM_004667,NR_033351,NR_033353	chr15,chr15,chr15	-,+,+	HERC2,GOLGA8F,GOLGA8G	-56356,82,82
chr15:23434864-23435335	chr15	-	28778225	28778275	False	NR_036443,NR_033351,NR_033353	chr15,chr15,chr15	+,-,-	HERC2P9,GOLGA8F,GOLGA8G	121312,-82,-82
chr15:23434864-23435335	chr15	+	23599736	23599786	False	NR_002824,NR_033350	chr15,chr15	-,+	HERC2P2,GOLGA8E	-221477,-164717
chr15:23434864-23435335	chr15	-	22715432	22715860	False	NR_027407,NM_001001413	chr15,chr15	-,+	GOLGA8DP,GOLGA6L1	-82,20385
chr4:56458383-56458783	chr4	+	56458413	56458751	True	NM_152401,NM_018475	chr4,chr4	-,+	PDCL2,TMEM165	-34,-196374
chr19:54759093-54759564	chr19	+	54759325	54759385	True	NM_001013,NM_001081442,NM_001081443,NM_006840	chr19,chr19,chr19,chr19	+,-,-,-	RPS9,LILRB5,LILRB5,LILRB5	-54650,1832,1832,1832
chr11:64949505-64949760	chr11	+	64949601	64949789	True	NM_172230,NM_001198868,NM_001198870,NM_001198869,NM_005186	chr11,chr11,chr11,chr11,chr11	-,+,+,+,+	SYVN1,CAPN1,CAPN1,CAPN1,CAPN1	-47598,-966,-348,-502,-348
chr6:161686822-161687039	chr6	+	161686856	161687076	True	NM_006724,NM_020133	chr6,chr6	+,-	MAP3K4,AGPAT4	-274092,8081
chr5:173115561-173116471	chr5	+	173115878	173116379	True	NR_027109,NM_138369	chr5,chr5	+,-	LOC285593,BOD1	-109272,-72212
chr17:26692363-26693107	chr17	+	26692451	26692955	True	NM_015584,NM_001080837,NM_000638,NM_152464,NM_015077	chr17,chr17,chr17,chr17,chr17	-,-,-,+,+	POLDIP2,SEBOX,VTN,TMEM199,SARM1	-7848,-186,4480,-7815,6031
chrX:153235459-153235840	chrX	+	153235458	153235811	True	NM_005334,NM_003492	chrX,chrX	-,+	HCFC1,TMEM187	1058,2179
chr15:25487721-25488714	chr15	+	25487789	25488755	True	NR_003344,NR_003358,NM_130838,NR_003353,NR_003352,NR_003351,NR_003350,NR_003357,NR_003356,NR_003355,NR_003354,NR_003302,NR_003303,NR_003359	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,-,+,+,+,+,+,+,+,+,+,+,+	SNORD115-29,SNORD115-43,UBE3A,SNORD115-38,SNORD115-37,SNORD115-36,SNORD115-35,SNORD115-42,SNORD115-41,SNORD115-40,SNORD115-39,SNORD115-10,SNORD115-11,SNORD115-44	5589,5589,161948,-2855,-4707,5589,-8446,3736,1869,5,-947,3736,5589,7250
chr10:94330927-94331867	chr10	+	94331066	94331747	True	NM_004969,NM_004523	chr10,chr10	-,+	IDE,KIF11	2158,21077
chr14:20925261-20926630	chr14	+	20925487	20926508	True	NM_001641,NM_017807,NM_001100814,NM_080649,NM_080648,NM_144568	chr14,chr14,chr14,chr14,chr14,chr14	+,-,-,+,+,-	APEX1,OSGEP,TMEM55B,APEX1,APEX1,TMEM55B	-2255,-2220,3179,-2255,-2255,3179
chr1:151811394-151811601	chr1	+	151811476	151811540	True	NR_024237,NM_005060,NM_001136003	chr1,chr1,chr1	+,-,-	LOC100132111,RORC,C2CD4D	-582,-7128,1543
chr5:179783497-179784635	chr5	+	179783546	179784575	True	NM_005110,NM_015455	chr5,chr5	-,+	GFPT2,CNOT6	-3231,136841
chr1:20618220-20618429	chr1	+	20618276	20618398	True	NM_001105572,NM_001039500	chr1,chr1	-,+	PLA2G2C,VWA5B1	-116589,-915
chr14:95075853-95077252	chr14	+	95075859	95077168	True	NM_001085,NM_173850	chr14,chr14	+,-	SERPINA3,SERPINA12	1545,-91678
chr11:118926919-118927423	chr11	+	118926927	118927167	True	NM_021729,NM_006389,NM_001130991	chr11,chr11,chr11	+,-,-	VPS11,HYOU1,HYOU1	11325,799,808
chr10:127266444-127267223	chr10	+	127266476	127267262	True	NR_023362,NM_001128202	chr10,chr10	+,-	LOC100169752,C10orf122	-3588,104501
chr10:121577646-121577873	chr10	+	121577648	121577884	True	NM_024834,NR_003252	chr10,chr10	-,+	MCMBP,INPP5F	54560,901
chr10:133918335-133918935	chr10	+	133918384	133918922	True	NM_001105521,NM_004052	chr10,chr10	+,-	JAKMIP3,BNIP3	-122,-122949
chr2:105951012-105952227	chr2	+	105951174	105951984	True	NM_001142621,NM_024093,NM_004257	chr2,chr2,chr2	-,+,-	TGFBRAP1,C2orf49,TGFBRAP1	-5026,2028,-5026
chr17:36827230-36827581	chr17	+	36827259	36827549	True	NM_005937,NM_001130677	chr17,chr17	+,-	MLLT6,C17orf96	34323,3688
chr14:57272961-57273704	chr14	+	57272962	57273745	True	NM_021728,NM_172337,NR_029385	chr14,chr14,chr14	-,-,+	OTX2,OTX2,OTX2OS1	3495,-617,6155
chr15:73666538-73667015	chr15	+	73666603	73667033	True	NM_001042367,NM_005477	chr15,chr15	+,-	C15orf60,HCN4	68465,-4998
chr2:159653277-159653861	chr2	+	159653293	159653846	True	NM_001171637,NM_001017920	chr2,chr2	-,+	CCDC148,DAPL1	-340028,-1516
chr11:129873369-129874071	chr11	+	129873481	129873939	True	NM_199437,NR_024233,NM_020228	chr11,chr11,chr11	-,+,-	PRDM10,NCRNA00167,PRDM10	-751,-1013,-751
chr11:71259290-71259579	chr11	+	71259373	71259627	True	NM_005553,NM_001005405	chr11,chr11	+,-	KRTAP5-9,KRTAP5-11	42,34344
chr12:50696644-50697887	chr12	+	50696706	50697718	True	NM_016357,NM_001170804	chr12,chr12	-,+	LIMA1,LARP4	-19353,96873
chr14:70654209-70654426	chr14	+	70654275	70654447	True	NM_058240,NM_182932,NM_033262,NM_003813,NM_183002	chr14,chr14,chr14,chr14,chr14	-,-,-,+,-	SLC8A3,SLC8A3,SLC8A3,ADAM21,SLC8A3	1390,1390,1390,269769,1390
chr1:50513824-50514103	chr1	+	50513887	50513951	True	NM_032785,NM_001144777	chr1,chr1	-,+	AGBL4,ELAVL4	-24261,-252
chr11:61518994-61519850	chr11	+	61519001	61519783	True	NR_026882,NM_001127392,NM_013279	chr11,chr11,chr11	-,+,+	DKFZP434K028,C11orf9,C11orf9	5403,337,3077
chr9:508296-509304	chr9	+	508427	509035	True	NM_152569,NM_015158	chr9,chr9	-,+	C9orf66,KANK1	-292534,-3789
chr4:113073942-113074813	chr4	+	113074007	113074776	True	NM_152400,NM_052864	chr4,chr4	+,-	C4orf32,TIFA	-7514,132341
chr12:52351348-52352280	chr12	+	52351535	52352049	True	NM_020328,NM_001013690,NM_004302,NM_020327	chr12,chr12,chr12,chr12	+,-,+,+	ACVR1B,FIGNL2,ACVR1B,ACVR1B	-6149,-125834,-6149,-4436
chr1:206536486-206537944	chr1	+	206536577	206537370	True	NM_015326,NM_001201478,NM_001007544	chr1,chr1,chr1	+,-,-	SRGAP2,EIF2D,C1orf186	-20428,248586,-247930
chr1:206536486-206537944	chr1	+	121086782	121086839	False	NR_003955,NM_001017986	chr1,chr1	+,-	EMBP1,FCGR1B	174070,-150838
chr1:206536486-206537944	chr1	+	144073615	144074011	False	NM_207418,NR_034178	chr1,chr1	-,+	FAM72D,SRGAP2P2	-160472,-157918
chr4:56823441-56823655	chr4	+	56823451	56823607	True	NM_006681,NM_025009	chr4,chr4	-,+	NMU,CEP135	-320986,-8465
chr9:139877830-139878993	chr9	+	139878047	139878995	True	NM_000954,NM_183241,NM_004669,NM_207510	chr9,chr9,chr9,chr9	+,+,-,+	PTGDS,C9orf142,CLIC3,LCNL1	-6142,7874,12079,-653
chr18:55885959-55886766	chr18	+	55885985	55886711	True	NM_001144966,NM_052947	chr18,chr18	+,-	NEDD4L,ALPK2	2055,409528
chr15:81588913-81589338	chr15	+	81589007	81589261	True	NM_004513,NM_181900	chr15,chr15	+,-	IL16,STARD5	-8,27313
chr20:56133940-56134468	chr20	+	56134025	56134479	True	NM_080618,NM_002591	chr20,chr20	-,+	CTCFL,PCK1	-33871,1657
chr12:65519803-65520513	chr12	+	65519926	65520548	True	NM_001167614,NM_007191	chr12,chr12	+,-	LEMD3,WIF1	42802,-4580
chr1:33009436-33010180	chr1	+	33009606	33009984	True	NM_178547,NM_001040441	chr1,chr1	-,+	ZBTB8OS,ZBTB8A	106261,-4885
chr19:5789772-5790026	chr19	+	5789841	5789967	True	NM_020175,NM_001134316,NM_001161619,NM_004558	chr19,chr19,chr19,chr19	-,-,-,+	DUS3L,PRR22,DUS3L,NRTN	1332,-5065,1332,33850
chr2:127862544-127862948	chr2	+	127862553	127862879	True	NM_000312,NM_139350,NM_004305,NM_139347,NM_139346,NM_139345,NM_139344,NM_139343,NM_139351,NM_139349,NM_139348	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-,-,-,-,-,-	PROC,BIN1,BIN1,BIN1,BIN1,BIN1,BIN1,BIN1,BIN1,BIN1,BIN1	313116,2035,2035,2035,2035,2035,2035,2035,2035,2035,2035
chr1:26223935-26224160	chr1	+	26223960	26224126	True	NR_037481,NM_203401,NM_203399,NM_005563,NM_001099626,NM_001145454	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,+,-	MIR3917,STMN1,STMN1,STMN1,FAM54B,STMN1	8869,8568,9292,8917,-76699,8917
chrY:6306499-6307379	chrY	+	6306626	6307365	True	NR_001535,NR_003590,NR_003588	chrY,chrY,chrY	+,-,+	TTTY21,TTTY2B,TTTY21B	4109,-10141,4109
chrY:6306499-6307379	chrY	-	9563014	9563753	False	NR_001535,NR_003588,NR_001536	chrY,chrY,chrY	-,-,+	TTTY21,TTTY21B,TTTY2	-4109,-4109,10141
chr20:61584219-61584446	chr20	+	61584376	61584482	True	NM_022105,NM_022082	chr20,chr20	-,+	DIDO1,SLC17A9	-15072,-428
chr16:79827007-79828322	chr16	+	79827044	79828107	True	NM_005360,NM_130897	chr16,chr16	-,+	MAF,DYNLRB2	-192422,746746
chr4:76816436-76818161	chr4	+	76817197	76818008	True	NM_001130017,NM_006239	chr4,chr4	+,-	ART3,PPEF2	114328,5723
chr21:44776105-44776309	chr21	+	44776163	44776287	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	93616,70765
chr1:16090427-16090882	chr1	+	16090456	16090896	True	NM_001024215,NM_001024216,NM_001089591,NM_017556	chr1,chr1,chr1,chr1	+,+,-,+	FBLIM1,FBLIM1,UQCRHL,FBLIM1	97,562,43348,-5252
chr17:74866788-74867777	chr17	+	74866943	74867759	True	NM_144677,NM_198955,NM_001199172,NR_036608	chr17,chr17,chr17,chr17	+,+,+,-	MGAT5B,MGAT5B,MGAT5B,SRSF2	-2196,969,-2196,-133450
chr9:126031325-126031851	chr9	+	126031504	126031852	True	NM_173689,NM_001171137,NM_018387,NR_033234	chr9,chr9,chr9,chr9	+,-,-,-	CRB2,STRBP,STRBP,STRBP	86595,-649,-661,-661
chr5:172572090-172572495	chr5	+	172572090	172572395	True	NM_001166175,NM_001205,NM_013980,NM_013979,NM_013978	chr5,chr5,chr5,chr5,chr5	-,+,+,+,+	NKX2-5,BNIP1,BNIP1,BNIP1,BNIP1	89973,-696,-696,-696,-696
chr3:45270195-45271525	chr3	+	45270219	45271228	True	NM_015444,NM_015340	chr3,chr3	-,+	TMEM158,LARS2	-2405,158846
chr20:44174940-44175612	chr20	+	44174941	44175541	True	NM_020398,NM_080827,NM_006103,NM_001198986	chr20,chr20,chr20,chr20	-,-,+,-	SPINLW1,WFDC6,WFDC2,SPINLW1-WFDC6	574,-6807,-76599,574
chr11:102997660-102998686	chr11	+	102997783	102998721	True	NM_001377,NM_032299	chr11,chr11	+,-	DYNC2H1,DCUN1D5	-17682,-34839
chr14:37127021-37127493	chr14	+	37127044	37127528	True	NM_006194,NM_014360	chr14,chr14	+,-	PAX9,NKX2-8	-322,-75258
chr14:24023744-24024355	chr14	+	24023903	24024146	True	NR_023314,NM_024328,NM_033400,NM_001126339	chr14,chr14,chr14,chr14	+,+,-,+	THTPA,THTPA,ZFHX2,THTPA	1051,1051,-3045,1051
chrX:97903630-97905141	chrX	+	97904010	97905166	True	NR_024608,NM_013347	chrX,chrX	-,+	LOC442459,RPA4	1289725,-1765161
chr12:33049156-33049393	chr12	+	33049247	33049337	True	NM_001005242,NM_004572,NM_012063	chr12,chr12,chr12	-,-,+	PKP2,PKP2,DNM1L	493,493,-217169
chr19:56733458-56734594	chr19	+	56733764	56734612	True	NM_024303,NM_033106	chr19,chr19	-,+	ZSCAN5A,GALP	5097,-46426
chr14:74815167-74815661	chr14	+	74815166	74815552	True	NR_003256,NM_018228	chr14,chr14	-,+	ABCD4,VRTN	-45399,-51
chr9:130213960-130214164	chr9	+	130214047	130214199	True	NM_001005374,NM_001190723,NM_001005373,NM_138361,NR_002449,NM_000976	chr9,chr9,chr9,chr9,chr9,chr9	+,+,+,+,-,-	LRSAM1,LRSAM1,LRSAM1,LRSAM1,SNORA65,RPL12	334,-334,-334,-310,-3131,-336
chr3:42744150-42745972	chr3	+	42744612	42746020	True	NM_152393,NM_020707,NR_027753	chr3,chr3,chr3	+,-,-	KBTBD5,HHATL,HHATL	-17652,-293,-1599
chr11:45683399-45684025	chr11	+	45683552	45683936	True	NR_027134,NM_003654	chr11,chr11	+,-	DKFZp779M0652,CHST1	109046,3286
chr20:45034196-45034694	chr20	+	45034195	45034699	True	NM_152854,NM_133171,NM_182764	chr20,chr20,chr20	+,-,-	CD40,ELMO2,ELMO2	-287340,622,622
chr13:43566320-43566900	chr13	+	43566385	43566937	True	NM_001002264,NM_013238,NM_033255	chr13,chr13,chr13	-,+,-	EPSTI1,DNAJC15,EPSTI1	-8,30424,-8
chr20:30599752-30600352	chr20	+	30599753	30600401	True	NM_030815,NM_080625	chr20,chr20	-,+	PDRG1,C20orf160	-59870,-1559
chr5:156277348-156277558	chr5	+	156277348	156277464	True	NM_001146726,NR_002168	chr5,chr5	-,+	TIMD4,PPP1R2P3	112852,84
chr22:32030435-32031379	chr22	+	32030521	32031302	True	NM_001007188,NM_014338	chr22,chr22	+,-	DEPDC5,PISD	118766,-3711
chr8:124056797-124057494	chr8	+	124056825	124057533	True	NM_001145088,NM_001134671,NM_024295	chr8,chr8,chr8	+,-,-	WDR67,DERL1,DERL1	27386,-2177,-2177
chr4:49297239-49298595	chr4	+	49297440	49298484	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-309228,-388625
chr4:49297239-49298595	chr4	-	49320942	49321986	False	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-332728,-412127
chr4:49297239-49298595	chr4	+	49303576	49304620	False	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-315364,-394761
chr13:21141251-21141517	chr13	+	21141291	21141499	True	NM_175605,NM_006531,NM_015974	chr13,chr13,chr13	+,+,-	IFT88,IFT88,CRYL1	-134,-134,-41279
chr20:35402771-35403034	chr20	+	35402865	35402969	True	NM_080628,NM_024918,NM_001145317,NM_001145316,NM_001145315,NM_001145318	chr20,chr20,chr20,chr20,chr20,chr20	+,-,-,-,-,-	C20orf118,DSN1,DSN1,DSN1,DSN1,DSN1	101600,-711,-635,-711,-635,-635
chr2:132251050-132251680	chr2	+	132251103	132251641	True	NM_001085365,NR_026922	chr2,chr2	-,+	MZT2A,LOC150776	-1039,-768
chr2:209052495-209053359	chr2	+	209052561	209053141	True	NM_001178000,NM_001099334	chr2,chr2	+,-	PIKFYVE,C2orf80	77849,1682
chr19:20746450-20747830	chr19	+	20746580	20747576	True	NM_001159293,NR_034060	chr19,chr19	-,+	ZNF737,ZNF85	1101,358482
chr12:53242693-53242915	chr12	+	53242720	53242934	True	NM_173352,NM_199187	chr12,chr12	-,+	KRT78,KRT18	-52,99720
chr20:22383513-22383860	chr20	+	22383570	22383870	True	NR_027090,NM_001052	chr20,chr20	-,+	LOC284788,SSTR4	17461,632186
chr16:66951535-66952500	chr16	+	66951537	66952358	True	NM_003869,NM_001204746,NM_001204744,NM_001204745,NM_001128850,NM_004165,NM_004062	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,-,-,-,-	CES2,CDH16,CDH16,CDH16,RRAD,RRAD,CDH16	15988,580,580,580,7132,7132,580
chr1:109194073-109195160	chr1	+	109194457	109195120	True	NM_001102592,NM_144584,NM_018061	chr1,chr1,chr1	-,-,+	HENMT1,HENMT1,PRPF38B	8681,9085,39811
chr15:66859769-66860377	chr15	+	66859811	66860244	True	NM_207338,NR_003105	chr15,chr15	-,+	LCTL,ZWILCH	-1976,-62431
chr17:56595116-56595473	chr17	+	56595286	56595464	True	NR_037156,NM_002876,NM_004687	chr17,chr17,chr17	-,+,-	SEPT4,RAD51C,MTMR4	9960,174498,-35
chr7:64734286-64734493	chr7	+	64734333	64734431	True	NM_001007253,NM_007139	chr7,chr7	-,+	ERV3,ZNF92	-267209,104336
chr18:3799580-3801350	chr18	+	3799639	3801371	True	NR_024101,NM_001003809	chr18,chr18	+,-	FLJ35776,DLGAP1	-205586,43975
chr10:43865194-43865540	chr10	+	43865339	43865543	True	NM_001184963,NM_001098208,NM_173160	chr10,chr10,chr10	+,-,+	FXYD4,HNRNPF,FXYD4	1548,26786,1548
chr3:98242060-98243148	chr3	+	98242060	98243100	True	NM_001040199,NM_005290,NM_001040182,NM_001040183,NM_001040181,NM_019895,NM_001040200	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-,-	CLDND1,GPR15,CLDND1,CLDND1,CLDND1,CLDND1,CLDND1	-150,7777,-150,-150,-150,-150,-150
chr7:56182358-56182916	chr7	+	56182408	56182604	True	NM_015411,NM_001145712,NM_016139	chr7,chr7,chr7	+,-,-	SUMF2,LOC389493,CHCHD2	-50546,1540,-8221
chr16:5121729-5121930	chr16	+	5121735	5121853	True	NM_001098514,NM_019109,NM_152459	chr16,chr16,chr16	-,+,-	C16orf89,ALG1,C16orf89	-5624,14,-5624
chr9:129676510-129676854	chr9	+	129676545	129676761	True	NM_001190729,NM_001190730,NM_012098,NM_014636	chr9,chr9,chr9,chr9	+,+,-,+	RALGPS1,RALGPS1,ANGPTL2,RALGPS1	291,291,208338,291
chr14:75228077-75230022	chr14	+	75228159	75229964	True	NM_019589,NM_001039479	chr14,chr14	+,-	YLPM1,KIAA0317	104,-48352
chr17:47866190-47866546	chr17	+	47866241	47866492	True	NM_007067,NM_001199155,NM_001199156,NM_001199157,NM_001199158,NM_030802	chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,-	MYST2,MYST2,MYST2,MYST2,MYST2,FAM117A	-311,-311,-311,-311,-311,-24723
chr7:77973257-77974829	chr7	+	77973433	77974829	True	NM_032936,NR_003680	chr7,chr7	-,+	TMEM60,RPL13AP17	-545686,1729
chr4:186348312-186348633	chr4	+	186348364	186348624	True	NR_028085,NM_001114357,NM_018359	chr4,chr4,chr4	-,+,-	UFSP2,C4orf47,UFSP2	-1225,1920,-1225
chrX:54069524-54070341	chrX	+	54069604	54070294	True	NM_001184897,NM_001184896,NM_015107,NM_058163,NM_001184898	chrX,chrX,chrX,chrX,chrX	-,-,-,+,-	PHF8,PHF8,PHF8,TSR2,PHF8	363,1325,363,396558,23
chr12:12224868-12225168	chr12	+	12224921	12225217	True	NM_138722,NM_138723,NM_030766,NM_002336	chr12,chr12,chr12,chr12	+,+,+,-	BCL2L14,BCL2L14,BCL2L14,LRP6	-570,-1094,-570,194644
chr5:173941735-173942295	chr5	+	173941832	173942280	True	NM_138369,NM_002449	chr5,chr5	-,+	BOD1,MSX2	-898166,209294
chr8:22497851-22498183	chr8	+	22497992	22498066	True	NR_027715,NM_021174	chr8,chr8	-,+	FLJ14107,KIAA1967	1716,-35504
chr17:7832850-7833351	chr17	+	7833023	7833303	True	NM_053051,NR_030697,NM_001166621,NR_030684,NM_004732,NM_001037144,NM_021210	chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,-,-,+,-	CNTROB,TRAPPC1,TRAPPC1,TRAPPC1,KCNAB3,CNTROB,TRAPPC1	2169,2064,2064,2014,-270,2169,2014
chr6:90954770-90955250	chr6	+	90954930	90955254	True	NM_021813,NM_032602	chr6,chr6	-,+	BACH2,GJA10	51358,-350797
chr18:3247393-3247776	chr18	+	3247416	3247814	True	NM_019856,NM_006471	chr18,chr18	-,+	MYOM1,MYL12A	-27310,61
chr1:199998326-199998686	chr1	+	199998432	199998646	True	NM_205860,NM_012482,NM_003822	chr1,chr1,chr1	+,-,+	NR5A2,ZNF281,NR5A2	-1713,380570,-1713
chr22:36011484-36012186	chr22	+	36011509	36012187	True	NM_005368,NM_030641,NM_203378,NM_203377	chr22,chr22,chr22,chr22	-,+,-,-	MB,APOL6,MB,MB	1255,32236,1426,7272
chr10:79395519-79396118	chr10	+	79395625	79396163	True	NR_024585,NM_001014797,NM_001161353,NM_001161352,NM_002247	chr10,chr10,chr10,chr10,chr10	+,-,-,-,-	LOC100128292,KCNMA1,KCNMA1,KCNMA1,KCNMA1	290406,1464,1464,1464,1464
chr6:101846903-101847316	chr6	+	101846907	101847269	True	NM_022091,NM_001166247,NM_021956,NM_175768	chr6,chr6,chr6,chr6	-,+,+,+	ASCC3,GRIK2,GRIK2,GRIK2	-517683,-97,-97,-97
chr1:66258846-66259057	chr1	+	66258918	66259024	True	NM_002600,NR_029516,NM_001037341	chr1,chr1,chr1	+,-,+	PDE4B,MIR101-1,PDE4B	-113,-734727,-776
chr21:37905724-37906490	chr21	+	37905724	37906350	True	NM_005441,NM_001146078	chr21,chr21	+,-	CHAF1B,CLDN14	-148087,8598
chr16:85618062-85618387	chr16	+	85618064	85618398	True	NM_001134473,NM_016095	chr16,chr16	+,-	KIAA0182,GINS2	26630,104241
chr22:39715898-39716211	chr22	+	39715910	39716188	True	NM_001033853,NM_000967,NR_000028,NR_002439,NR_000026,NR_000027,NM_145731	chr22,chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,-,-,+	RPL3,RPL3,SNORD83B,SNORD43,RNU86,SNORD83A,SYNGR1	-240,-240,-5994,-792,-3009,-4598,29765
chr17:79934590-79934852	chr17	+	79934654	79934876	True	NM_178493,NM_024083	chr17,chr17	-,+	NOTUM,ASPSCR1	-15597,549
chr11:17758283-17758680	chr11	+	17758299	17758729	True	NM_004976,NM_153676,NM_001112741	chr11,chr11,chr11	+,-,+	KCNC1,USH1C,KCNC1	-869,-192336,-869
chr1:119960005-119960724	chr1	+	119960011	119960753	True	NM_000198,NR_036540,NM_001166120	chr1,chr1,chr1	+,-,+	HSD3B2,LOC644242,HSD3B2	-2326,181211,-2515
chr3:38496112-38496381	chr3	+	38496117	38496405	True	NM_001106,NR_028389	chr3,chr3	+,-	ACVR2B,LOC100128640	-378,-38
chr1:17908630-17909053	chr1	+	17908641	17909051	True	NM_018715,NM_001011722	chr1,chr1	-,+	RCC2,ARHGEF10L	-142421,-1644
chrX:21962950-21963901	chrX	+	21963095	21963703	True	NM_004595,NM_014332	chrX,chrX	+,-	SMS,SMPX	-4431,-186865
chr11:111634805-111636294	chr11	+	111634864	111636317	True	NM_181699,NM_181700,NM_022761,NM_002716,NM_001177563,NM_001177562	chr11,chr11,chr11,chr11,chr11,chr11	-,-,+,-,-,-	PPP2R1B,PPP2R1B,C11orf1,PPP2R1B,PPP2R1B,PPP2R1B	902,902,113630,902,902,902
chr5:138895006-138895603	chr5	+	138895123	138895469	True	NM_198282,NM_003339	chr5,chr5	-,+	TMEM173,UBE2D2	-32780,45281
chr2:211454670-211454910	chr2	+	211454802	211454910	True	NM_001136575,NM_001122634	chr2,chr2	-,+	LANCL1,CPS1	-113303,3168
chr15:30917034-30917681	chr15	+	30917076	30917678	True	NM_148911,NM_001039841	chr15,chr15	-,+	CHRFAM7A,ARHGAP11B	-231212,1200
chr15:30917034-30917681	chr15	+	32906460	32907062	False	NM_014783,NM_199357,NR_036650	chr15,chr15,chr15	+,+,-	ARHGAP11A,ARHGAP11A,LOC100288615	628,628,-80518
chr5:72423354-72424639	chr5	+	72423860	72424601	True	NM_004472,NM_173490,NM_001161342	chr5,chr5,chr5	-,+,+	FOXD1,TMEM171,TMEM171	319801,-7530,-7530
chr2:189157672-189158530	chr2	+	189157766	189158420	True	NR_030287,NM_052952,NM_016315	chr2,chr2,chr2	+,-,+	MIR561,DIRC1,GULP1	3798,496461,-427
chr6:160681673-160683562	chr6	+	160681844	160683219	True	NM_003058,NM_021977	chr6,chr6	-,+	SLC22A2,SLC22A3	-1881,86205
chr19:45656315-45656724	chr19	+	45656422	45656508	True	NM_212550,NM_198478	chr19,chr19	+,-	BLOC1S3,NKPD1	25494,6950
chr19:1861420-1861714	chr19	+	1861424	1861642	True	NR_034114,NM_031918	chr19,chr19	+,-	LOC100288123,KLF16	-39387,1972
chrX:1714589-1714950	chrY	+	1664597	1664963	False	NM_004043,NR_027383,NM_005088,NM_178129	chrY,chrY,chrY,chrY	+,+,+,-	ASMT,AKAP17A,AKAP17A,P2RY8	-300,-4162,-4162,-58560
chrX:1714589-1714950	chrX	+	1714597	1714963	True	NM_004043,NR_027383,NM_005088,NM_178129	chrX,chrX,chrX,chrX	+,+,+,-	ASMT,AKAP17A,AKAP17A,P2RY8	-300,-4162,-4162,-58560
chr5:78278039-78279169	chr5	+	78278039	78279217	True	NM_000046,NM_001178005,NM_198709	chr5,chr5,chr5	-,+,-	ARSB,BHMT2,ARSB	3190,86329,2599
chr11:119062322-119062979	chr11	+	119062576	119063023	True	NM_001145018,NM_001168468,NR_033122,NM_024791	chr11,chr11,chr11,chr11	-,+,+,+	CCDC153,PDZD3,PDZD3,PDZD3	3612,-6468,-6468,-6468
chr6:130341687-130342144	chr6	+	130341790	130342072	True	NM_001007102,NM_032438,NM_001010876	chr6,chr6,chr6	+,+,-	L3MBTL3,L3MBTL3,C6orf191	-2113,-2113,-159374
chr7:91875709-91875922	chr7	+	91875808	91875970	True	NM_019004,NM_004912,NM_194456,NM_194454,NM_194455,NM_001013406	chr7,chr7,chr7,chr7,chr7,chr7	+,-,-,-,-,-	ANKIB1,KRIT1,KRIT1,KRIT1,KRIT1,KRIT1	-311,-596,-394,-580,-394,-580
chr19:44322455-44323609	chr19	+	44322519	44323623	True	NM_182573,NM_181845	chr19,chr19	-,+	LYPD5,ZNF283	1235,7849
chr19:39107740-39107944	chr19	+	39107925	39107993	True	NM_013234,NM_007181,NM_001042600	chr19,chr19,chr19	+,-,-	EIF3K,MAP4K1,MAP4K1	1728,700,700
chr3:52310881-52311850	chr3	+	52311148	52311715	True	NM_001144951,NM_025222,NR_029660	chr3,chr3,chr3	+,-,-	GLYCTK,WDR82,MIRLET7G	10120,994,-8771
chr5:179229535-179230738	chr5	+	179229785	179230717	True	NR_031598,NM_054013,NM_145867,NM_001142299,NM_001142298,NM_014275	chr5,chr5,chr5,chr5,chr5,chr5	-,-,+,+,+,-	MIR1229,MGAT4B,LTC4S,SQSTM1,SQSTM1,MGAT4B	-4439,6,-8850,3285,2670,3285
chr15:59401340-59401905	chr15	+	59401512	59401675	True	NM_004701,NR_031750	chr15,chr15	+,-	CCNB2,MIR2116	-4243,61845
chr2:24154602-24156298	chr2	+	24155259	24155540	True	NM_181713,NM_017552	chr2,chr2	+,-	UBXN2A,ATAD2B	7835,-5325
chrX:100085826-100086925	chrX	+	100085832	100086823	True	NM_001325,NM_007052	chrX,chrX	+,-	CSTF2,NOX1	-10535,42562
chrX:18996977-18998322	chrX	+	18997440	18998012	True	NM_000292,NR_029379	chrX,chrX	-,+	PHKA2,LOC100132163	4527,-89082
chr12:43070218-43070929	chr12	+	43070266	43070964	True	NM_016488,NM_153026	chr12,chr12	+,-	PPHLN1,PRICKLE1	-350376,-86694
chr14:96117566-96118919	chr14	+	96117581	96118872	True	NM_001098725,NR_028288	chr14,chr14	-,+	TCL1A,TCL6	61718,-117
chr17:8702780-8703222	chr17	+	8702854	8703157	True	NM_152599,NM_004822	chr17,chr17	-,+	MFSD6L,NTN1	-187,221701
chr6:46915717-46916466	chr6	+	46915787	46916483	True	NM_005588,NM_015234	chr6,chr6	+,-	MEP1A,GPR116	-154744,6246
chr3:19188606-19188808	chr3	+	19188743	19188853	True	NM_001131010,NM_144633	chr3,chr3	-,+	SATB1,KCNH8	-708478,1163
chr19:58357962-58359630	chr19	+	58358375	58359355	True	NM_032828,NR_024162,NM_001204817	chr19,chr19,chr19	+,-,+	ZNF587,FKBP1AP1,ZNF587	1825,-19545,1825
chr16:31487517-31487730	chr16	+	31487538	31487767	True	NM_022744,NM_015927,NM_003041,NM_001164719,NM_001042454	chr16,chr16,chr16,chr16,chr16	-,+,+,+,+	C16orf58,TGFB1I1,SLC5A2,TGFB1I1,TGFB1I1	31989,-3063,6671,-4060,-4113
chr19:8841073-8841548	chr19	+	8841088	8841572	True	NM_178525,NM_001004699	chr19,chr19	-,+	ACTL9,OR2Z1	-31916,1
chr19:38799782-38800112	chr19	+	38799888	38800128	True	NM_001039673,NM_001145461,NM_001039671,NM_001039672,NM_001145462,NM_033520,NM_033557,NM_001145463	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,+,-,-	YIF1B,YIF1B,YIF1B,YIF1B,YIF1B,C19orf33,YIF1B,YIF1B	6528,6367,6367,6528,6367,-5135,431,6528
chr17:48785328-48787253	chr17	+	48785327	48786510	True	NM_052855,NM_006107	chr17,chr17	-,+	ANKRD40,LUC7L3	-57,10415
chr16:18571314-18572377	chr16	+	18571543	18572305	True	NM_001004060,NM_173614,NR_003569	chr16,chr16,chr16	-,-,+	NOMO2,NOMO2,ABCC6P1	1179,1179,10264
chr16:18571314-18572377	chr16	-	14928753	14928803	False	NR_023387,NM_014287	chr16,chr16	-,+	ABCC6P2,NOMO1	-10194,-1161
chr16:18571314-18572377	chr16	-	16327569	16327619	False	NM_001079528,NM_001004067	chr16,chr16	-,+	ABCC6,NOMO3	-10241,-1231
chr1:108184189-108184875	chr1	+	108184189	108184705	True	NM_001079874,NM_014917	chr1,chr1	-,+	VAV3,NTNG1	46482,-501495
chr3:8812453-8813491	chr3	+	8812526	8813405	True	NM_001234,NM_000916	chr3,chr3	+,-	CAV3,OXTR	-37081,-1226
chr13:44544015-44544347	chr13	+	44544047	44544293	True	NM_144974,NR_026955	chr13,chr13	-,+	CCDC122,NCRNA00284	-90221,52177
chr13:44544015-44544347	chr11	+	46396180	46396347	False	NM_001012333,NM_002391,NM_001012334,NM_000741	chr11,chr11,chr11,chr11	+,+,+,-	MDK,MDK,MDK,CHRM4	6955,6871,6270,11909
chr6:90344762-90346105	chr6	+	90345213	90345962	True	NM_020466,NR_028495,NR_028494,NR_028493,NM_001137667	chr6,chr6,chr6,chr6,chr6	-,-,-,-,+	LYRM2,LYRM2,LYRM2,LYRM2,CASP8AP2	2571,2313,2313,2313,193656
chrX:100912646-100914112	chrX	+	100912752	100913994	True	NM_014782,NM_177949,NM_177948	chrX,chrX,chrX	-,-,+	ARMCX2,ARMCX2,ARMCX3	919,919,-34452
chr3:127686082-127686839	chr3	+	127686091	127686884	True	NM_001003794,NM_207335	chr3,chr3	-,+	MGLL,KBTBD12	-144040,-44240
chr17:34419235-34419621	chr17	+	34419240	34419542	True	NM_002984,NM_002983	chr17,chr17	+,-	CCL4,CCL3	11677,-1734
chr12:9261014-9261833	chr12	+	9261034	9261879	True	NM_000014,NR_026971	chr12,chr12	-,+	A2M,LOC144571	6734,-43321
chr8:122652781-122653141	chr8	+	122652896	122653131	True	NR_002835,NM_005328	chr8,chr8	+,-	HAS2-AS1,HAS2	-1362,549
chr1:32644954-32645207	chr1	+	32645034	32645160	True	NM_175852,NM_019118	chr1,chr1	+,-	TXLNA,TMEM234	184,42816
chr2:198382811-198383445	chr2	+	198382880	198382973	True	NM_199482,NM_015387,NM_001100819,NM_199440,NM_001204094	chr2,chr2,chr2,chr2,chr2	+,+,+,-,+	MOBKL3,MOBKL3,MOBKL3,HSPD1,MOBKL3	-2637,-2165,-2165,-17882,-1910
chr3:44380350-44381156	chr3	+	44380455	44380927	True	NM_001029840,NM_001029839,NM_173826,NM_181489	chr3,chr3,chr3,chr3	+,+,+,-	C3orf23,C3orf23,C3orf23,ZNF445	-895,-562,-562,138285
chr11:66513112-66513348	chr11	+	66513118	66513264	True	NM_024650,NM_006946	chr11,chr11	+,-	C11orf80,SPTBN2	-962,-24248
chr1:211852371-211853441	chr1	+	211852463	211853290	True	NR_026761,NM_002497,NM_001204182,NM_001204183	chr1,chr1,chr1,chr1	+,-,-,-	C1orf97,NEK2,NEK2,NEK2	-296418,-3491,-3491,-3491
chr2:174829110-174829375	chr2	+	174829225	174829291	True	NM_003111,NM_001145250,NM_001017371,NM_001172712	chr2,chr2,chr2,chr2	-,+,-,-	SP3,SP9,SP3,SP3	1189,370529,-278,1189
chr1:41616097-41616328	chr1	+	41616231	41616337	True	NR_037868,NM_001172222	chr1,chr1	+,-	LOC100507178,SCMH1	-136028,9322
chr7:151106730-151106984	chr7	+	151106889	151106949	True	NR_034012,NR_034013,NM_198285	chr7,chr7,chr7	+,+,-	LOC100131176,LOC100131176,WDR86	-618,-618,225
chr14:105269177-105270552	chr14	+	105269241	105270285	True	NM_005163,NM_001137601,NM_001014431,NM_001014432	chr14,chr14,chr14,chr14	-,+,-,-	AKT1,ZBTB42,AKT1,AKT1	-9303,-2360,-7161,-7161
chr22:44709901-44710467	chr22	+	44710304	44710459	True	NM_001099294,NM_001137606	chr22,chr22	-,+	KIAA1644,PARVG	-1573,-133098
chr12:5232124-5233338	chr12	+	5232272	5233271	True	NM_006422,NM_002234	chr12,chr12	-,+	AKAP3,KCNA5	-477929,-79239
chr17:7941469-7942501	chr17	+	7941619	7942496	True	NM_001141,NM_001139,NM_001039131,NM_001039130	chr17,chr17,chr17,chr17	+,-,+,+	ALOX15B,ALOX12B,ALOX15B,ALOX15B	-33,48575,-33,-33
chr22:21317459-21318699	chr22	+	21317544	21318692	True	NM_001018060,NM_001008695,NR_027464,NM_001146288,NM_144704	chr22,chr22,chr22,chr22,chr22	+,-,+,+,+	AIFM3,THAP7,AIFM3,AIFM3,AIFM3	725,37762,2754,2754,725
chr5:177590051-177591182	chr5	+	177590239	177591204	True	NM_022762,NM_017838,NM_001034833	chr5,chr5,chr5	+,-,-	RMND5B,NHP2,NHP2	-32262,-9278,-9278
chr3:9976305-9976535	chr3	+	9976347	9976575	True	NM_001031717,NM_207351,NM_015513,NM_001077415	chr3,chr3,chr3,chr3	+,-,+,+	CRELD1,PRRT3,CRELD1,CRELD1	-880,17553,-881,-880
chr18:23713153-23713801	chr18	+	23713278	23713849	True	NM_001025097,NM_001025096,NM_005637,NM_144662	chr18,chr18,chr18,chr18	+,+,-,+	PSMA8,PSMA8,SS18,PSMA8	-34,-34,-42667,-34
chr3:112937013-112938055	chr3	+	112937119	112938071	True	NR_027796,NM_033254	chr3,chr3	-,+	C3orf17,BOC	-198564,-5796
chr2:217498121-217498414	chr2	+	217498142	217498404	True	NM_000597,NM_000599	chr2,chr2	+,-	IGFBP2,IGFBP5	-66,61918
chr2:242209358-242209592	chr2	+	242209421	242209639	True	NM_203346,NM_001008491	chr2,chr2	-,+	HDLBP,SEPT2	2712,45083
chr11:65780303-65781287	chr11	+	65780482	65780986	True	NM_001323,NM_032325	chr11,chr11	+,-	CST6,EIF1AD	-1071,-10904
chr7:117119920-117121226	chr7	+	117120048	117121237	True	NR_023315,NM_000492	chr7,chr7	-,+	ASZ1,CFTR	-52471,-82
chr11:122933734-122935635	chr11	+	122933967	122935434	True	NR_027288,NM_153201,NM_006597	chr11,chr11,chr11	+,-,-	LOC341056,HSPA8,HSPA8	-45744,-1123,-1123
chr16:30392243-30392534	chr16	+	30392254	30392554	True	NM_013292,NM_052838	chr16,chr16	+,-	MYLPF,SEPT1	-6182,1667
chr19:40008833-40009635	chr19	+	40009043	40009635	True	NM_152361,NM_182704	chr19,chr19	-,+	EID2B,SELV	13909,-3341
chr8:146229068-146229269	chr8	+	146229109	146229212	True	NR_002807,NR_026974	chr8,chr8	+,+	TMED10P1,C8orf77	-8909,-963
chr5:68658910-68659326	chr5	+	68659047	68659298	True	NM_003187,NM_002873,NM_133340,NM_133338,NM_133339,NM_001015892,NM_001015891,NM_133344,NM_133341,NM_016283,NM_133343,NM_133342	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,+,+,+,+,-,-,+,+,-,+,+	TAF9,RAD17,RAD17,RAD17,RAD17,TAF9,TAF9,RAD17,RAD17,TAF9,RAD17,RAD17	6168,7233,7563,6340,7982,6599,6599,6340,7563,6168,5825,6340
chr7:79083792-79084046	chr7	+	79083828	79084026	True	NR_031667,NM_012301	chr7,chr7	+,-	MIR548M,MAGI2	316545,-938
chr19:42774109-42774381	chr19	+	42774116	42774374	True	NM_006494,NM_015125	chr19,chr19	-,+	ERF,CIC	-14807,14442
chr12:49078387-49079655	chr12	+	49078398	49079530	True	NR_024266,NR_029448,NM_017822	chr12,chr12,chr12	-,+,-	LOC144438,LOC255411,C12orf41	6749,41687,-2363
chr14:104029668-104030412	chr14	+	104029686	104030076	True	NM_032374,NM_001015049,NM_001015048,NM_004873	chr14,chr14,chr14,chr14	+,-,-,-	C14orf153,BAG5,BAG5,BAG5	-441,-1031,-535,-1031
chr14:55593379-55595225	chr14	+	55593854	55594940	True	NM_002306,NR_003225,NM_001146015,NM_001177388	chr14,chr14,chr14,chr14	+,+,-,+	LGALS3,LGALS3,DLGAP5,LGALS3	994,8760,63506,994
chr10:13141526-13141922	chr10	+	13141558	13141922	True	NM_031455,NM_021980,NM_001008212,NM_001008213,NM_001008211	chr10,chr10,chr10,chr10,chr10	-,+,+,+,+	CCDC3,OPTN,OPTN,OPTN,OPTN	-97854,159,159,159,159
chrX:100310922-100311883	chrX	+	100311844	100311908	True	NM_021637,NM_024917,NM_001167972,NM_001167971,NM_001167970	chrX,chrX,chrX,chrX,chrX	+,-,-,-,-	TMEM35,TRMT2B,TRMT2B,TRMT2B,TRMT2B	21927,-4739,-4739,-4739,-4739
chr20:61002864-61003242	chr20	+	61002914	61003158	True	NM_001024,NM_080833	chr20,chr20	+,-	RPS21,C20orf151	-40844,-285
chrX:36980778-36981424	chrX	+	36980965	36981465	True	NM_006520,NM_001013736	chrX,chrX	-,+	DYNLT3,FAM47C	725474,44966
chrX:106147470-106148518	chrX	+	106147546	106148561	True	NM_001171706,NM_138382,NM_001171092	chrX,chrX,chrX	-,-,+	RIPPLY1,RIPPLY1,CLDN2	-985,-985,-4203
chr19:58612809-58613545	chr19	+	58613218	58613516	True	NM_001145543,NM_007134,NM_001145544,NM_023926	chr19,chr19,chr19,chr19	-,+,-,-	ZSCAN18,ZNF135,ZSCAN18,ZSCAN18	-3488,-42662,-3488,-3488
chr1:183546470-183547658	chr1	+	183546527	183547398	True	NM_000433,NM_015149	chr1,chr1	-,+	NCF2,RGL1	12392,57809
chr17:64300040-64300566	chr17	+	64300126	64300600	True	NM_002737,NM_000042	chr17,chr17	+,-	PRKCA,APOH	-1251,-74570
chr1:54481620-54483351	chr1	+	54481689	54483291	True	NM_001010978,NM_153035	chr1,chr1	-,+	LDLRAD1,TCEANC2	562,35982
chr16:76310972-76311793	chr16	+	76310974	76311824	True	NM_005548,NM_033401	chr16,chr16	-,+	KARS,CNTNAP4	-629389,-143
chr2:74643128-74643329	chr2	+	74643138	74643326	True	NM_001145054,NM_032118	chr2,chr2	-,+	C2orf81,WDR54	1568,5558
chr14:24802110-24802517	chr14	+	24802209	24802423	True	NM_139247,NM_181657,NM_001198592,NM_001198568,NM_006871	chr14,chr14,chr14,chr14,chr14	-,+,-,-,-	ADCY4,LTB4R,ADCY4,ADCY4,RIPK3	1914,-19947,1914,1914,6879
chr1:196878130-196879164	chr1	+	196878137	196878855	True	NM_001994,NM_006684	chr1,chr1	-,+	F13B,CFHR4	157602,-21051
chr10:102105695-102106226	chr10	+	102105713	102106191	True	NM_016112,NM_005063	chr10,chr10	-,+	PKD2L1,SCD	-15470,580
chr8:56690786-56691800	chr8	+	56690864	56691836	True	NM_152417,NM_024831	chr8,chr8	-,+	TMEM68,TGS1	-4979,-5131
chr11:72387583-72387833	chr11	+	72387608	72387752	True	NM_033388,NM_001146209,NM_002599	chr11,chr11,chr11	+,-,-	ATG16L2,PDE2A,PDE2A	137698,-7500,-2114
chr2:217362417-217362647	chr2	+	217362426	217362631	True	NM_000998,NM_020814	chr2,chr2	+,-	RPL37A,MARCH4	888,-125676
chr22:43249063-43249920	chr22	+	43249200	43249901	True	NM_001142293,NM_014570,NR_029422	chr22,chr22,chr22	-,-,+	ARFGAP3,ARFGAP3,RNU12	3558,3558,-238012
chr19:24271170-24271492	chr19	+	24271307	24271431	True	NM_203282,NR_003603	chr19,chr19	+,-	ZNF254,LOC100101266	-1386,74872
chr21:47264119-47265019	chr21	+	47264174	47265016	True	NM_194255,NM_020528,NM_001130141	chr21,chr21,chr21	-,+,+	SLC19A1,PCBP3,PCBP3	-301789,4858,4858
chr1:15766531-15766862	chr1	+	15766549	15766623	True	NM_001229,NM_007272	chr1,chr1	-,+	CASP9,CTRC	84367,-1670
chr2:127412844-127413503	chr2	+	127412924	127413529	True	NM_002101,NM_016815,NM_139348	chr2,chr2,chr2	+,+,-	GYPC,GYPC,BIN1	154,154,451385
chr1:207924489-207925110	chr1	+	207924578	207925146	True	NM_153826,NM_172359,NM_172361,NR_029832,NM_002389,NM_172351,NM_172350,NM_172353,NM_172352	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,-,+,+,+,+,+	CD46,CD46,CD46,MIR29C,CD46,CD46,CD46,CD46,CD46	236,236,236,50188,236,236,236,236,236
chr16:66460339-66460791	chr16	+	66460441	66460801	True	NM_001172643,NM_001136106,NM_001197224,NM_001178020,NM_001197225	chr16,chr16,chr16,chr16,chr16	-,+,+,+,+	TK2,BEAN1,BEAN1,BEAN1,BEAN1	123443,14,14,14,14
chr22:24950988-24951227	chr22	+	24951024	24951260	True	NM_004175,NM_031444	chr22,chr22	+,-	SNRPD3,C22orf13	357,65
chr13:37394195-37395585	chr13	+	37394197	37395068	True	NM_001127217,NM_000538	chr13,chr13	-,+	SMAD9,RFXAP	99392,-914
chr22:44892459-44892890	chr22	+	44892487	44892915	True	NR_028409,NM_032287	chr22,chr22	+,-	NCRNA00207,LDOC1L	72304,1140
chr10:5565733-5565968	chr10	+	5565766	5566008	True	NM_017422,NM_005185	chr10,chr10	-,+	CALML5,CALML3	-24233,915
chr8:87525526-87526559	chr8	+	87525627	87526516	True	NM_016033,NM_003909	chr8,chr8	-,+	FAM82B,CPNE3	-4618,139
chr5:150723578-150724631	chr5	+	150723636	150724656	True	NM_001167607,NM_181776	chr5,chr5	+,-	GM2A,SLC36A2	-91074,2545
chr7:50864133-50864785	chr7	+	50864352	50864804	True	NM_001001555,NR_033845	chr7,chr7	-,+	GRB10,LOC100129427	-3193,-264946
chr2:182546615-182547066	chr2	+	182546620	182546986	True	NM_002500,NM_001130445	chr2,chr2	-,+	NEUROD1,SSFA2	-1228,209485
chr1:155277054-155277668	chr1	+	155277357	155277439	True	NM_001135822,NM_002004,NM_000298,NM_001135821,NM_181871	chr1,chr1,chr1,chr1,chr1	+,+,-,+,-	FDPS,FDPS,PKLR,FDPS,PKLR	1099,1099,-6132,1265,-6565
chr8:54752240-54752777	chr8	+	54752239	54752785	True	NM_015941,NM_170587,NM_213620,NM_213619	chr8,chr8,chr8,chr8	-,+,-,-	ATP6V1H,RGS20,ATP6V1H,ATP6V1H	3115,11582,2812,3115
chr11:129756304-129757652	chr11	+	129756489	129757587	True	NM_138788,NM_001143835,NM_006165	chr11,chr11,chr11	+,-,-	TMEM45B,NFRKB,NFRKB	-70806,7953,5367
chr22:50529582-50530701	chr22	+	50529599	50530721	True	NM_139202,NM_018995,NM_015166,NM_001164105,NM_001164104	chr22,chr22,chr22,chr22,chr22	-,+,-,+,+	MLC1,MOV10L1,MLC1,MOV10L1,MOV10L1	-5818,-1215,-5241,-965,-1215
chr17:42769820-42770452	chr17	+	42769979	42770097	True	NM_001099225,NM_144609,NR_036623	chr17,chr17,chr17	-,-,+	CCDC43,CCDC43,DBF4B	-2814,-2814,15878
chr15:25447389-25448247	chr15	+	25447481	25448109	True	NR_003315,NR_003314,NR_003313,NR_003312,NR_003311,NR_003310,NR_022010,NR_003308,NR_003309,NM_130838,NR_003305,NR_003306,NR_003307	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,-,+,+,+	SNORD115-23,SNORD115-22,SNORD115-21,SNORD115-20,SNORD115-19,SNORD115-18,PAR4,SNORD115-16,SNORD115-17,UBE3A,SNORD115-13,SNORD115-14,SNORD115-15	8833,6955,3299,3299,264,264,8729,-2937,264,202594,-9064,-7464,3299
chr10:94337806-94338331	chr10	+	94337905	94338050	True	NM_004969,NM_004523	chr10,chr10	-,+	IDE,KIF11	-4053,14774
chr22:42321519-42322244	chr22	+	42321785	42322217	True	NR_029507,NM_052945	chr22,chr22	+,-	MIR33A,TNFRSF13C	-24888,654
chr10:126153898-126155547	chr10	+	126153905	126155029	True	NM_001146340,NM_022126,NM_001167880	chr10,chr10,chr10	-,+,+	NKX1-2,LHPP,LHPP	-15355,-3616,-3616
chr16:29692378-29692908	chr16	+	29692422	29692800	True	NM_175900,NM_014298	chr16,chr16	-,+	C16orf54,QPRT	64598,-2032
chr5:139413864-139415674	chr5	+	139413867	139415531	True	NM_001184935,NM_013982,NM_013983,NM_013981,NM_004883,NM_005859	chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,-,+	NRG2,NRG2,NRG2,NRG2,NRG2,PURA	7405,7405,7405,7405,7405,78176
chr9:131104108-131104354	chr9	+	131104294	131104402	True	NM_015679,NM_005094	chr9,chr9	-,+	TRUB2,SLC27A4	-19597,-1506
chr16:71566243-71567182	chr16	+	71566287	71566884	True	NM_001166395,NM_005769,NM_006961	chr16,chr16,chr16	+,+,-	CHST4,CHST4,ZNF19	-6185,-6316,-43033
chr5:173154770-173155891	chr5	+	173154794	173155844	True	NR_027109,NM_138369	chr5,chr5	+,-	LOC285593,BOD1	-148188,-111128
chr19:2162887-2163118	chr19	+	2162934	2162994	True	NM_003938,NM_032482	chr19,chr19	-,+	AP3D1,DOT1L	-11378,1153
chr19:54024433-54024742	chr19	+	54024482	54024572	True	NM_018555,NR_002938	chr19,chr19	+,-	ZNF331,LOC284379	-356,82229
chr3:133737403-133738822	chr3	+	133737406	133738682	True	NM_021203,NM_005630	chr3,chr3	+,-	SRPRB,SLCO2A1	-234580,10288
chr10:118199031-118199396	chr10	+	118199038	118199436	True	NM_005264,NM_001011709	chr10,chr10	-,+	GFRA1,PNLIPRP3	-165912,-11667
chr17:3820908-3822364	chr17	+	3821009	3822086	True	NM_002558,NM_031965	chr17,chr17	-,+	P2RX1,GSG2	-1049,-193863
chr14:90863598-90863825	chr14	+	90863601	90863778	True	NM_006888,NM_001166106,NM_199043	chr14,chr14,chr14	+,+,-	CALM1,CALM1,C14orf102	-325,827,-65322
chr5:112824644-112825130	chr5	+	112824643	112825117	True	NM_001085377,NM_022828	chr5,chr5	-,+	MCC,YTHDC2	-116,24273
chr12:118406497-118406724	chr12	+	118406576	118406644	True	NM_173598,NM_001130112	chr12,chr12	-,+	KSR2,RFC5	-548,47863
chr1:36774304-36775199	chr1	+	36774620	36775195	True	NM_001162530,NM_024676,NM_018166	chr1,chr1,chr1	+,+,-	SH3D21,SH3D21,FAM176B	-2685,-1971,14610
chr18:75689177-75689619	chr18	+	75689294	75689636	True	NM_001480,NM_001025100	chr18,chr18	+,-	GALR1,MBP	-727337,-844520
chr12:51782157-51784105	chr12	+	51782363	51783919	True	NM_004858,NM_007210	chr12,chr12	+,-	SLC4A8,GALNT6	34674,1331
chr7:114563365-114563607	chr7	+	114563403	114563649	True	NM_002711,NM_001166346,NM_001166345,NM_199072	chr7,chr7,chr7,chr7	-,+,+,+	PPP1R3A,MDFIC,MDFIC,MDFIC	-1004321,-1246,-1246,-1246
chr16:85209423-85210111	chr16	+	85209422	85210134	True	NR_033984,NM_198491	chr16,chr16	+,-	LOC400548,FAM92B	-38717,-63308
chr6:28938199-28939921	chr6_qbl_hap6	+	241624	243189	False	NM_001195202,NM_001010877	chr6_qbl_hap6,chr6_qbl_hap6	+,-	LOC100129636,ZNF311	64207,33295
chr6:28938199-28939921	chr6	+	28938224	28939791	True	NM_001195202,NM_001010877	chr6,chr6	+,-	LOC100129636,ZNF311	64208,33296
chr6:28938199-28939921	chr6_mann_hap4	+	241629	243194	False	NM_001195202,NM_001010877	chr6_mann_hap4,chr6_mann_hap4	+,-	LOC100129636,ZNF311	64206,33294
chr6:28938199-28939921	chr6_ssto_hap7	+	279130	280754	False	NM_001195202,NM_001010877	chr6_ssto_hap7,chr6_ssto_hap7	+,-	LOC100129636,ZNF311	64125,33214
chr6:28938199-28939921	chr6_cox_hap2	+	456962	458586	False	NM_001195202,NM_001010877	chr6_cox_hap2,chr6_cox_hap2	+,-	LOC100129636,ZNF311	64233,33310
chr8:56987141-56987685	chr8	+	56987344	56987648	True	NM_001011667,NM_001146227,NR_002437,NM_001023	chr8,chr8,chr8,chr8	+,-,-,-	CHCHD7,RPS20,SNORD54,RPS20	136666,-204,-884,-204
chrX:153715505-153716133	chrX	+	153715668	153716154	True	NM_001142392,NM_019848,NM_001142391,NM_014235,NM_017514,NM_006014	chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,+,-	SLC10A3,SLC10A3,SLC10A3,UBL4A,PLXNA3,LAGE3	2898,2898,2898,-736,-29096,-8072
chr8:144769334-144769551	chr8	+	144769334	144769432	True	NR_015445,NM_001100598,NM_001100599,NM_001162914,NM_173831	chr8,chr8,chr8,chr8,chr8	+,+,+,-,+	BREA2,ZNF707,ZNF707,LOC100130274,ZNF707	9852,-2765,-2765,20897,-2765
chr13:114536158-114536540	chr13	+	114536259	114536577	True	NM_001143945,NM_001143946,NR_024609	chr13,chr13,chr13	-,-,+	GAS6,GAS6,FLJ44054	2490,187,50032
chr6:35698373-35699393	chr6	+	35698665	35699413	True	NR_027117,NM_001145775,NM_145028	chr6,chr6,chr6	-,-,+	LOC285847,FKBP5,C6orf81	5361,-2305,5445
chrX:49055468-49056125	chrX	+	49055521	49056053	True	NM_002668,NM_003179	chrX,chrX	+,-	PLP2,SYP	-27388,658
chr1:158296745-158298709	chr1	+	158297119	158298735	True	NM_001042583,NM_001764	chr1,chr1	+,-	CD1E,CD1B	24750,2636
chr5:471361-471578	chr5	+	471368	471616	True	NM_007277,NR_024158	chr5,chr5	+,-	EXOC3,LOC25845	-28085,1514
chr2:150186205-150186419	chr2	+	150186228	150186452	True	NM_015702,NM_001195685,NM_194317	chr2,chr2,chr2	-,+,+	MMADHC,LYPD6,LYPD6	257928,46,576
chr6:131472604-131473687	chr6	+	131473027	131473402	True	NM_001431,NM_016377	chr6,chr6	-,+	EPB41L2,AKAP7	-88565,-6623
chr2:131674844-131675486	chr2	+	131674861	131675284	True	NM_032995,NM_015320,NM_001009993	chr2,chr2,chr2	+,+,-	ARHGEF4,ARHGEF4,FAM168B	-688,-688,175771
chr15:41696445-41696998	chr15	+	41696612	41696820	True	NM_016013,NM_015138	chr15,chr15	-,+	NDUFAF1,RTF1	-1970,12481
chr17:78116564-78117016	chr17	+	78116858	78117016	True	NM_024110,NM_014740	chr17,chr17	+,-	CARD14,EIF4A3	35264,4016
chr16:30485576-30487426	chr16	+	30485581	30487039	True	NM_012248,NM_002209,NM_001114380	chr16,chr16,chr16	-,+,+	SEPHS2,ITGAL,ITGAL	-28357,-1649,-1649
chr3:9747181-9747864	chr3	+	9747190	9747764	True	NM_003656,NM_153635	chr3,chr3	-,+	CAMK1,CPNE9	63954,-1731
chr1:13033995-13035905	chr1	+	13034774	13035564	True	NM_001100631,NM_001010889	chr1,chr1	+,-	PRAMEF22,PRAMEF6	-22,-27368
chr1:13033995-13035905	chr1	+	13140172	13140471	False	NM_001100631,NM_001013407	chr1,chr1	+,-	PRAMEF22,PRAMEF5	-104687,-22421
chr1:13033995-13035905	chr1	-	13331649	13332439	False	NM_001013407,NM_001100631,NM_001013692	chr1,chr1,chr1	+,-,-	PRAMEF5,PRAMEF22,PRAMEF3	27379,22,43
chr1:151809487-151810021	chr1	+	151809516	151810006	True	NR_024237,NM_005060,NM_001136003	chr1,chr1,chr1	+,-,-	LOC100132111,RORC,C2CD4D	938,-5168,3077
chrX:49395303-49395667	chrX	+	49395326	49395611	True	NM_003785,NM_001468	chrX,chrX	-,+	PAGE1,GAGE1	65036,-31761
chr3:186437440-186437822	chr3	+	186437562	186437868	True	NM_001102416,NM_002916,NM_001166451,NM_000893	chr3,chr3,chr3,chr3	+,-,+,+	KNG1,RFC4,KNG1,KNG1	-2527,86472,-2527,-2527
chr12:104015078-104015364	chr12	+	104015099	104015239	True	NM_017564,NM_001099336	chr12,chr12	+,-	STAB2,C12orf42	-34089,-125350
chr5:173171326-173171704	chr5	+	173171345	173171697	True	NM_030627,NM_138369	chr5,chr5	+,-	CPEB4,BOD1	143633,-127679
chr13:96633640-96635551	chr13	+	96633983	96635570	True	NM_153456,NM_020121	chr13,chr13	+,-	HS6ST3,UGGT2	107522,70220
chr20:35170304-35170520	chr20	+	35170348	35170410	True	NM_181526,NM_032214,NM_006097	chr20,chr20,chr20	+,-,+	MYL9,SLA2,MYL9	-502,104198,-502
chr19:4516745-4516960	chr19	+	4516749	4516959	True	NM_032631,NM_001080400	chr19,chr19	+,-	HDGFRP2,PLIN4	-44545,807
chr12:58338720-58339603	chr12	+	58338741	58339625	True	NM_005730,NM_033276	chr12,chr12	-,+	CTDSP2,XRCC6BP1	-97994,-3347
chr19:4458717-4459091	chr19	+	4458930	4458992	True	NM_025241,NM_001171091,NM_001001520	chr19,chr19,chr19	-,-,+	UBXN6,UBXN6,HDGFRP2	-1139,-3635,13262
chr3:119010421-119010832	chr3	+	119010493	119010566	True	NM_212543,NM_020754	chr3,chr3	-,+	B4GALT4,ARHGAP31	-50741,2653
chr6:108618552-108618913	chr6	+	108618636	108618787	True	NM_145315,NM_152827	chr6,chr6	+,-	LACE1,SNX3	-2596,-36172
chr1:167687289-167689234	chr1	+	167687359	167689004	True	NM_003851,NM_024569,NM_001146191,NM_003953	chr1,chr1,chr1,chr1	-,+,+,+	CREG1,MPZL1,MPZL1,MPZL1	-164303,2182,2182,2182
chr12:39297504-39298361	chr12	+	39297505	39298239	True	NM_001013620,NM_153634	chr12,chr12	+,-	ALG10B,CPNE8	-587006,1231
chr6:33773399-33773982	chr6	+	33773407	33774024	True	NM_002224,NM_002418,NM_001184698,NM_001040109	chr6,chr6,chr6,chr6	+,-,-,-	ITPR3,MLN,MLN,MLN	-184302,-1614,-1614,-1614
chr5:115152020-115152307	chr5	+	115152210	115152340	True	NM_001284,NM_001801	chr5,chr5	+,-	AP3S1,CDO1	25278,115
chrX:24043939-24044367	chrX	+	24044165	24044333	True	NM_030624,NM_001415	chrX,chrX	-,+	KLHL15,EIF2S3	1020,28731
chr20:4616740-4618615	chr20	+	4616870	4618439	True	NR_024267,NM_000311	chr20,chr20	-,+	PRNT,PRNP	102926,48357
chr10:97678699-97680570	chr10	+	97678817	97680543	True	NM_001130446,NR_036113	chr10,chr10	+,-	C10orf131,MIR3157	-11156,143663
chr8:99830179-99831207	chr8	+	99830235	99831043	True	NM_006281,NM_001142462	chr8,chr8	-,+	STK3,OSR2	6930,125587
chr19:7580227-7580881	chr19	+	7580283	7580541	True	NM_018083,NM_080662,NM_020533	chr19,chr19,chr19	+,-,+	ZNF358,PEX11G,MCOLN1	462,-26378,6954
chr17:33389-34206	chr17	+	33396	34182	True	NM_001013672,NM_003585	chr17,chr17	+,-	C17orf97,DOC2B	225935,-1976
chr6:7314048-7315413	chr6	+	7314229	7315009	True	NM_031480,NM_003144	chr6,chr6	+,-	RIOK1,SSR1	75052,-688
chr6:52622685-52622910	chr6	+	52622706	52622950	True	NM_014051,NM_000846	chr6,chr6	+,-	TMEM14A,GSTA2	-86873,5461
chr20:34023217-34024961	chr20	+	34023430	34024946	True	NM_007186,NM_000557	chr20,chr20	+,-	CEP250,GDF5	18276,1131
chr19:11310129-11310846	chr19	+	11310174	11310900	True	NM_015493,NM_018687,NM_001136191	chr19,chr19,chr19	-,+,-	KANK2,LOC55908,KANK2	-4908,39394,-1931
chr17:42633090-42633901	chr17	+	42633276	42633892	True	NM_001466,NR_036474	chr17,chr17	+,-	FZD2,GPATCH8	919,-52319
chr22:38841194-38841642	chr22	+	38841309	38841693	True	NM_016657,NM_152868,NM_004981	chr22,chr22,chr22	+,-,-	KDELR3,KCNJ4,KCNJ4	22389,9567,-1276
chr13:41882713-41883532	chr13	+	41882726	41883095	True	NM_001110798,NM_004294,NM_018527,NM_024561	chr13,chr13,chr13,chr13	+,-,+,+	NAA16,MTRF1,NAA16,NAA16	2245,-45013,2245,2245
chr2:32233393-32234674	chr2	+	32233812	32234528	True	NM_015955,NM_014946,NM_001137602	chr2,chr2,chr2	-,+,-	MEMO1,SPAST,MEMO1	1220,54151,1220
chr6:52285244-52285790	chr6	+	52285250	52285710	True	NM_018100,NM_001172420,NM_002388,NR_033327	chr6,chr6,chr6,chr6	+,+,-,+	EFHC1,EFHC1,MCM3,EFHC1	-307,94,-135668,-307
chr20:3801022-3801249	chr20	+	3801028	3801150	True	NM_001204447,NM_001204446,NM_001810,NM_018347	chr20,chr20,chr20,chr20	+,+,-,+	C20orf29,C20orf29,CENPB,C20orf29	20,20,-33691,20
chr1:15485519-15486928	chr1	+	15485522	15486693	True	NM_018022,NM_001136217,NM_001136218,NM_001136216,NR_027136	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	TMEM51,TMEM51,TMEM51,TMEM51,C1orf126	-5344,-6545,-5344,-6545,-6562
chr14:53019145-53019360	chr14	+	53019146	53019384	True	NM_020784,NM_001160047,NM_001099652	chr14,chr14,chr14	-,-,+	TXNDC16,TXNDC16,GPR137C	-1,-1,481
chr5:179286351-179286829	chr5	+	179286403	179286878	True	NM_003900,NM_001017987,NM_016175	chr5,chr5,chr5	+,-,-	SQSTM1,C5orf45,C5orf45	-38612,-563,-563
chr2:24306606-24307034	chr2	+	24306619	24307009	True	NM_147184,NM_054033,NM_004881,NM_016047	chr2,chr2,chr2,chr2	-,+,-,-	TP53I3,FKBP1B,TP53I3,SF3B14	696,-34086,769,-7305
chr1:203275324-203276276	chr1	+	203275551	203276301	True	NR_034151,NM_006763,NR_034150	chr1,chr1,chr1	-,+,-	LOC730227,BTG2,LOC730227	-1098,-938,-1098
chr1:40235809-40236276	chr1	+	40235830	40236270	True	NM_022120,NM_001195007	chr1,chr1	-,+	OXCT2,PPIE	800,-31364
chr1:40235809-40236276	chr1	-	39981284	39981705	False	NR_003929,NM_181809	chr1,chr1	-,+	PPIEL,BMP8A	43715,-24017
chr17:7466977-7467229	chr17	+	7467062	7467267	True	NM_001416,NM_172087,NM_003808,NR_037926,NM_172088,NM_006942,NM_001198624,NM_015670,NM_001204510,NM_001198623,NM_001198622	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,-,+,+,+,+,+	EIF4A1,TNFSF13,TNFSF13,SENP3-EIF4A1,TNFSF13,SOX15,TNFSF13,SENP3,EIF4A1,TNFSF13,TNFSF13	8756,-5504,-5504,-1804,-5504,26271,-5504,-1804,8756,-5504,-5504
chr11:113641856-113643414	chr11	+	113641992	113643366	True	NM_001101389,NM_004724	chr11,chr11	+,-	CLDN25,ZW10	7151,1109
chr2:68385225-68386208	chr2	+	68385394	68386232	True	NM_138458,NM_020143	chr2,chr2	-,+	WDR92,PNO1	-738,-448
chr2:27633414-27634120	chr2	+	27633910	27634130	True	NM_177983,NM_013392	chr2,chr2	-,+	PPM1G,NRBP1	-1414,17342
chr7:87918864-87920278	chr7	+	87919025	87920270	True	NM_024636,NM_021723	chr7,chr7	-,+	STEAP4,ADAM22	15989,-355510
chr17:79830126-79830545	chr17	+	79830196	79830258	True	NM_001185077,NM_001002244,NM_004309,NM_001185078	chr17,chr17,chr17,chr17	-,+,-,-	ARHGDIA,ANAPC11,ARHGDIA,ARHGDIA	-1406,19340,-914,-914
chr15:41695221-41695630	chr15	+	41695228	41695488	True	NM_016013,NM_015138	chr15,chr15	-,+	NDUFAF1,RTF1	-586,13813
chr2:33048688-33049883	chr2	+	33048937	33049806	True	NM_021209,NR_027098	chr2,chr2	-,+	NLRC4,LOC285045	-558125,703
chr12:120700869-120701115	chr12	+	120700893	120701049	True	NM_001080855,NM_002859,NM_012240	chr12,chr12,chr12	-,-,+	PXN,PXN,SIRT4	2564,2564,39074
chr5:66477849-66478377	chr5	+	66477866	66478244	True	NM_015183,NM_005582	chr5,chr5	+,-	MAST4,CD180	-353313,14424
chr19:13079885-13080434	chr19	+	13080128	13080448	True	NM_152654,NM_052850	chr19,chr19	+,-	DAND5,GADD45GIP1	-3,-12078
chr19:37022040-37023160	chr19	+	37022039	37022572	True	NM_001012756,NM_001166036,NM_001166037,NR_036504,NM_001166038	chr19,chr19,chr19,chr19,chr19	-,-,-,+,-	ZNF260,ZNF260,ZNF260,LOC728752,ZNF260	-2791,-2791,-2791,-41571,-2791
chr5:16615431-16615922	chr5	+	16615564	16615965	True	NM_001034850,NM_006317	chr5,chr5	-,+	FAM134B,BASP1	1210,601784
chr2:10087124-10087890	chr2	+	10087277	10087697	True	NM_001037160,NM_198182	chr2,chr2	-,+	CYS1,GRHL1	132891,4094
chr19:33555013-33555482	chr19	+	33555219	33555465	True	NM_033103,NM_018025	chr19,chr19	-,+	RHPN2,GPATCH1	409,16320
chr19:18283351-18283984	chr19	+	18283445	18284025	True	NM_002866,NM_006332	chr19,chr19	-,+	RAB3A,IFI30	30899,553
chr4:108911720-108911996	chr4	+	108911720	108911898	True	NM_005327,NM_001166119,NM_001184705	chr4,chr4,chr4	+,-,+	HADH,LEF1,HADH	-906,176105,-906
chr6:152479517-152480673	chr6	+	152479560	152480520	True	NM_000125,NM_133650	chr6,chr6	+,-	ESR1,SYNE1	-350812,20131
chr2:220304465-220306198	chr2	+	220304754	220306148	True	NM_012100,NM_005876	chr2,chr2	-,+	DNPEP,SPEG	-52092,-5113
chr14:60336431-60336644	chr14	+	60336471	60336565	True	NM_021136,NM_022495	chr14,chr14	-,+	RTN1,C14orf135	1042,222063
chr12:41100681-41101209	chr12	+	41100730	41100976	True	NM_175038,NM_052885	chr12,chr12	+,-	CNTN1,SLC2A13	-14434,-601069
chr2:238876306-238877330	chr2	+	238876308	238877333	True	NM_080678,NR_037904,NM_030768	chr2,chr2,chr2	+,+,-	UBE2F,UBE2F-SCLY,ILKAP	-772,-772,235041
chr13:114462482-114462701	chr13	+	114462665	114462740	True	NM_182614,NR_028064	chr13,chr13	+,-	FAM70B,LOC100130386	-500,-8603
chr1:46019589-46020879	chr1	+	46020276	46020832	True	NM_001202414,NM_153326,NM_006066,NM_001202431,NM_001202413	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	AKR1A1,AKR1A1,AKR1A1,PRDX1,AKR1A1	-3884,-3884,-3884,-31714,-3884
chr15:78287062-78287527	chr15	+	78287350	78287510	True	NM_001101404,NR_026998	chr15,chr15	+,-	SH2D7,LOC91450	97416,-783
chr5:748626-748988	chr5	+	748836	748928	True	NM_018140,NM_007030	chr5,chr5	+,-	CEP72,TPPP	-136482,-55326
chr3:12409135-12409839	chr3	+	12409418	12409569	True	NM_001195279,NM_015869	chr3,chr3	-,+	LOC100129480,PPARG	177453,-16474
chr19:33073436-33074896	chr19	+	33073462	33074591	True	NM_004708,NM_032139	chr19,chr19	+,-	PDCD5,ANKRD27	-1426,91563
chr11:120532384-120533047	chr11	+	120532404	120532970	True	NM_012101,NM_014619	chr11,chr11	-,+	TRIM29,GRIK4	-523541,-1427
chr6:84742996-84743255	chr6	+	84743022	84743248	True	NM_014895,NM_138409	chr6,chr6	-,+	KIAA1009,MRAP2	194137,171
chr17:79006911-79007401	chr17	+	79007041	79007311	True	NM_001144888,NR_026857,NM_017450,NM_017451,NM_006340	chr17,chr17,chr17,chr17,chr17	+,-,+,+,+	BAIAP2,FLJ90757,BAIAP2,BAIAP2,BAIAP2	1635,1264,1635,1635,1635
chr14:23589931-23590199	chr14	+	23589976	23590148	True	NM_001805,NM_017924	chr14,chr14	-,+	CEBPE,C14orf119	-1502,-25239
chr6:4855199-4855655	chr6	+	4855225	4855452	True	NM_001143970,NM_006638	chr6,chr6	+,-	CDYL,RPP40	-18956,148876
chr22:51000342-51001255	chr22	+	51000393	51001217	True	NM_001123225,NM_138433	chr22,chr22	-,+	C22orf41,KLHDC7B	161,-13982
chr17:34124062-34125085	chr17	+	34124071	34124947	True	NM_001032278,NM_024302,NM_139215	chr17,chr17,chr17	-,-,+	MMP28,MMP28,TAF15	-1431,-1431,11540
chr6:54202210-54203239	chr6	+	54202404	54203250	True	NM_014464,NM_001003760	chr6,chr6	+,-	TINAG,KLHL31	-29253,-671898
chr8:48172336-48172722	chr8	+	48172339	48172740	True	NM_005195,NM_001080394	chr8,chr8	-,+	CEBPD,KIAA0146	478036,801
chr5:442848-443203	chr5	+	442889	443055	True	NM_007277,NM_138464	chr5,chr5	+,-	EXOC3,C5orf55	278,253
chr22:36425384-36425708	chr22	+	36425553	36425751	True	NM_001082579,NM_001082578,NM_001136540	chr22,chr22,chr22	-,-,+	RBFOX2,RBFOX2,APOL1	-968,-968,223365
chr19:3728973-3729498	chr19	+	3729052	3729292	True	NM_014428,NM_012398	chr19,chr19	+,-	TJP3,PIP5K1C	-729,-28575
chrX:47966890-47968021	chrX	+	47967095	47967577	True	NM_001205103,NR_028366,NR_033730	chrX,chrX,chrX	+,+,-	LOC100509575,SSX6,ZNF630	-41,-51,-36070
chrX:47966890-47968021	chrX	+	52652177	52652247	False	NR_027250,NM_173358	chrX,chrX	+,-	SSX8,SSX7	-263,31773
chr5:121673765-121674962	chr5	+	121673845	121674992	True	NM_005460,NM_002317	chr5,chr5	+,-	SNCAIP,LOX	-26084,-259790
chr22:25400077-25400767	chr22	+	25400108	25400639	True	NM_001001663,NM_001145206	chr22,chr22	-,+	TMEM211,KIAA1671	-64794,23301
chr19:32897547-32898349	chr19	+	32897549	32898391	True	NM_207325,NM_032139,NM_001172774	chr19,chr19,chr19	+,-,+	DPY19L3,ANKRD27,DPY19L3	-578,267761,-945
chr19:7970464-7970798	chr19	+	7970614	7970798	True	NM_206833,NM_145185	chr19,chr19	-,+	CTXN1,MAP2K7	20303,-1905
chr19:11850952-11851877	chr19	+	11851058	11851763	True	NM_152355,NM_001080493	chr19,chr19	+,-	ZNF441,ZNF823	26051,-1298
chr8:15095656-15096023	chr8	+	15095748	15096052	True	NM_139167,NM_006765	chr8,chr8	-,+	SGCZ,TUSC3	10,301543
chr2:31442153-31442476	chr2	+	31442164	31442516	True	NM_014600,NM_001145122	chr2,chr2	+,-	EHD3,CAPN14	14363,-1753
chr16:56758607-56759267	chr16	+	56758796	56758973	True	NM_005950,NM_014669	chr16,chr16	-,+	MT1G,NUP93	-56819,5043
chr14:24558136-24559961	chr14	+	24558787	24559836	True	NM_001018073,NM_006177,NM_004563	chr14,chr14,chr14	+,-,+	PCK2,NRL,PCK2	3646,-4955,3646
chr16:4422585-4423035	chr16	+	4422707	4423029	True	NM_016069,NM_138440	chr16,chr16	-,+	PAM16,VASN	-21334,-909
chr12:8810461-8811163	chr12	+	8810608	8811154	True	NM_003480,NM_020734	chr12,chr12	-,+	MFAP5,RIMKLB	4329,39363
chr15:101136925-101138304	chr15	+	101136968	101138013	True	NM_001040616,NM_198243,NM_024708	chr15,chr15,chr15	-,+,+	LINS,ASB7,ASB7	4482,4741,4741
chr1:33168469-33168785	chr1	+	33168533	33168691	True	NM_030786,NM_001161708,NM_020888	chr1,chr1,chr1	-,-,+	SYNC,SYNC,KIAA1522	-172,-172,38820
chr13:108518746-108518993	chr13	+	108518756	108519036	True	NM_032859,NM_001080396	chr13,chr13	+,-	ABHD13,FAM155A	351726,474
chr1:151774660-151776311	chr1	+	151774724	151776182	True	NM_016178,NR_024237,NM_001004432	chr1,chr1,chr1	+,+,-	OAZ3,LOC100132111,LINGO4	-35644,34762,1750
chr17:41994953-41995166	chr17	+	41994985	41995182	True	NR_026770,NM_005374	chr17,chr17	+,-	C17orf88,MPP2	-460,-9872
chr1:143720825-143722761	chr1	+	143720837	143722800	True	NR_033189,NR_027468	chr1,chr1	+,-	LOC100130000,FLJ39739	-33758,21707
chr1:143720825-143722761	chr1	+	147908746	147910309	False	NM_001097616,NR_027468	chr1,chr1	+,-	GPR89C,FLJ39739	-483242,21721
chr19:52936176-52936912	chr19	+	52936276	52936959	True	NM_001143939,NM_001143938,NM_001105549	chr19,chr19,chr19	+,+,-	ZNF534,ZNF534,ZNF83	-1660,-1660,204738
chr1:205815012-205816643	chr1	+	205815558	205815987	True	NM_152491,NM_181644	chr1,chr1	-,+	PM20D1,MFSD4	3344,-277498
chr12:64196808-64197602	chr12	+	64197064	64197560	True	NM_014254,NM_173812	chr12,chr12	+,-	TMEM5,DPY19L2	-23486,-134710
chr20:33541577-33542211	chr20	+	33541701	33542085	True	NM_000178,NM_020884	chr20,chr20	-,+	GSS,MYH7B	1566,1618
chr10:79793852-79794645	chr10	+	79794066	79794554	True	NM_001026,NM_007055,NM_001142282,NM_001142283,NM_001142284,NM_033022,NM_001142285	chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,-,+,+,+,+,+	RPS24,POLR3A,RPS24,RPS24,RPS24,RPS24,RPS24	-599,-4768,-599,-599,-599,-599,-599
chr12:97301284-97301698	chr12	+	97301299	97301739	True	NM_002595,NM_152905,NM_001135175,NM_001135176,NM_001135177	chr12,chr12,chr12,chr12,chr12	-,+,+,+,+	CDK17,NEDD1,NEDD1,NEDD1,NEDD1	-506933,-349,-106,-349,-349
chr9:99796634-99797270	chr9	+	99796717	99797298	True	NM_001333,NM_001045477,NM_001201575	chr9,chr9,chr9	-,+,-	CTSL2,FAM22G,CTSL2	4349,-105482,4682
chr18:74242469-74243265	chr18	+	74242519	74243095	True	NR_015417,NM_014643	chr18,chr18	+,-	LOC284276,ZNF516	-1958,-35373
chr22:42977266-42977732	chr22	+	42977388	42977680	True	NR_002184,NM_014509	chr22,chr22	-,+	RRP7B,SERHL2	387,-27514
chr22:42977266-42977732	chr22	+	42915172	42915368	False	NR_027786,NM_015703	chr22,chr22	+,-	SERHL,RRP7A	-18638,511
chr14:75331566-75332265	chr14	+	75331874	75332269	True	NM_001933,NM_001080408	chr14,chr14	+,-	DLST,PROX2	16324,-1337
chr18:15330458-15330781	chr18	+	15330465	15330557	True	NR_027417,NR_036153	chr18,chr18	-,+	LOC644669,MIR3156-2	-4547,-500351
chr12:97041387-97042659	chr12	+	97041644	97042319	True	NM_002595,NM_001135176	chr12,chr12	-,+	CDK17,NEDD1	-247278,258681
chr14:103849985-103850357	chr14	+	103850043	103850163	True	NM_001128918,NM_001128919,NM_001823,NM_001128920,NM_001128921,NM_002376	chr14,chr14,chr14,chr14,chr14,chr14	+,+,-,+,+,+	MARK3,MARK3,CKB,MARK3,MARK3,MARK3	1537,1537,139057,1537,1537,1537
chr9:138556090-138556406	chr9	+	138556097	138556174	True	NM_001001676,NM_182974	chr9,chr9	+,-	LCN9,GLT6D1	-988,-24711
chr8:124216856-124217696	chr8	+	124217011	124217736	True	NR_024479,NM_207006	chr8,chr8	-,+	LOC100131726,FAM83A	-2028,-22317
chr7:150747200-150747656	chr7	+	150747274	150747540	True	NM_004769,NM_001164410,NM_020321,NM_020322,NM_001199692,NM_003040,NM_004935	chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,-,+,+,+,+,-	ACCN3,CDK5,ACCN3,ACCN3,SLC4A2,SLC4A2,CDK5	-1720,7562,-1720,-1720,7758,9116,7562
chr8:87504736-87506504	chr8	+	87504920	87506466	True	NM_003909,NM_016033	chr8,chr8	+,-	CPNE3,FAM82B	20189,14603
chr15:42123284-42123657	chr15	+	42123459	42123703	True	NR_036195,NM_001198588,NM_001114632,NM_001114633,NM_005090	chr15,chr15,chr15,chr15,chr15	-,+,+,+,+	MIR4310,JMJD7-PLA2G4B,JMJD7,PLA2G4B,JMJD7-PLA2G4B	35096,-3227,-3227,7307,-3227
chr12:80495715-80496309	chr12	+	80495831	80496291	True	NM_001143885,NM_173591	chr12,chr12	-,+	PPP1R12A,OTOGL	-166596,106941
chr18:72268622-72270253	chr18	+	72268631	72270079	True	NR_024484,NM_032649	chr18,chr18	-,+	LOC400657,CNDP1	-3560,-66990
chrX:31526366-31526743	chrX	+	31526370	31526734	True	NM_203391,NM_004014	chrX,chrX	+,-	GK,DMD	-854945,45
chr1:161493657-161493973	chr1	+	161493694	161493904	True	NM_000569,NM_002155	chr1,chr1	-,+	FCGR3A,HSPA6	25964,131
chr1:161493657-161493973	chr1	+	161575503	161575553	False	NM_000570,NR_024151	chr1,chr1	-,+	FCGR3B,HSPA7	25655,295
chr14:105195051-105195556	chr14	+	105195067	105195539	True	NM_199165,NM_005163,NM_152328	chr14,chr14,chr14	+,-,+	ADSSL1,AKT1,ADSSL1	688,64449,-4584
chr15:82651484-82652959	chr15	+	82652388	82653010	True	NR_004847,NR_024474,NM_001164465	chr15,chr15,chr15	+,+,-	UBE2Q2P2,UBE2Q2P3,GOLGA6L10	-5164,-5164,-10682
chr15:82651484-82652959	chr15	-	82792659	82792722	False	NR_026811,NR_033936,NR_033579	chr15,chr15,chr15	-,-,+	LOC80154,LOC727849,LOC440297	5651,5680,-39266
chr15:82651484-82652959	chr15	-	83177236	83177299	False	NR_026811,NR_033936,NR_033579	chr15,chr15,chr15	-,-,+	LOC80154,LOC727849,LOC440297	5652,5681,-47257
chr15:82651484-82652959	chr15	+	83028883	83029506	False	NR_004847,NR_024474,NM_001164465	chr15,chr15,chr15	+,+,-	UBE2Q2P2,UBE2Q2P3,GOLGA6L10	-5172,-5172,-10685
chr8:48653005-48653331	chr8	+	48653116	48653196	True	NM_005914,NM_005195	chr8,chr8	+,-	MCM4,CEBPD	219566,-2390
chr17:48940868-48942387	chr17	+	48941025	48942427	True	NM_005749,NM_175575	chr17,chr17	-,+	TOB1,WFIKKN2	60,-28477
chr6:143270707-143271525	chr6	+	143270736	143271544	True	NM_016108,NM_006734	chr6,chr6	+,-	AIG1,HIVEP2	110478,-4398
chr2:171573357-171573584	chr2	+	171573423	171573499	True	NR_027433,NM_001003845	chr2,chr2	-,+	LOC440925,SP5	-2346,-1617
chr12:53626445-53626835	chr12	+	53626446	53626666	True	NM_000966,NM_001170790	chr12,chr12	-,+	RARG,MFSD5	-410,18703
chr19:40508900-40509773	chr19	+	40509368	40509560	True	NM_001005851,NM_178544	chr19,chr19	-,+	ZNF780B,ZNF546	52625,-6488
chrX:100087060-100088788	chrX	+	100087270	100088830	True	NM_001325,NM_007052	chrX,chrX	+,-	CSTF2,NOX1	-11986,40561
chr14:65747550-65747906	chr14	+	65747592	65747864	True	NM_178155,NR_024334	chr14,chr14	+,-	FUT8,LOC645431	129975,131521
chr6:99794570-99795452	chr6	+	99794598	99795498	True	NM_032511,NM_001195131	chr6,chr6	-,+	C6orf168,LOC100130890	2083,173371
chr8:70381996-70382391	chr8	+	70382323	70382399	True	NM_015170,NM_001128204,NM_001146009	chr8,chr8,chr8	+,+,-	SULF1,SULF1,SLCO5A1	-3516,-3516,363055
chr6:149852423-149852851	chr6	+	149852688	149852765	True	NM_139126,NM_138785	chr6,chr6	-,+	PPIL4,C6orf72	14469,34762
chr4:140472894-140473196	chr4	+	140473042	140473130	True	NM_031296,NM_030648	chr4,chr4	+,-	RAB33B,SETD7	-98140,4507
chr19:12916630-12917185	chr19	+	12916756	12917174	True	NM_005809,NM_181738,NM_006397	chr19,chr19,chr19	-,-,+	PRDX2,PRDX2,RNASEH2A	-4062,-4062,253
chr1:22108571-22109139	chr1	+	22108703	22108961	True	NM_001032730,NM_001013693,NM_032236	chr1,chr1,chr1	-,+,-	USP48,LDLRAD2,USP48	777,29796,777
chr3:50126562-50126914	chr3	+	50126716	50126880	True	NR_036627,NM_032355,NM_005778	chr3,chr3,chr3	+,-,+	RBM5,MON1A,RBM5	-415,-159271,-415
chr18:14543329-14543722	chr18	+	14543438	14543736	True	NM_001137671,NM_001145029	chr18,chr18	-,+	POTEC,ANKRD30B	49,204502
chr1:207225422-207225717	chr1	+	207225428	207225676	True	NM_001018053,NM_018566,NM_006212	chr1,chr1,chr1	+,-,+	PFKFB2,YOD1,PFKFB2	943,-1006,943
chr5:96241308-96242654	chr5	+	96241712	96242406	True	NM_001198541,NM_005575	chr5,chr5	-,+	ERAP1,LNPEP	-91864,28939
chr1:202830698-202830907	chr1	+	202830840	202830936	True	NM_002871,NR_002929	chr1,chr1	-,+	RABIF,LOC148709	27377,-9
chr17:4711779-4712454	chr17	+	4711838	4712442	True	NM_002663,NM_182566	chr17,chr17	+,-	PLD2,VMO1	-1468,-22109
chr19:51891423-51892390	chr19	+	51891425	51892251	True	NM_001161748,NM_001193623,NR_033235,NM_030657	chr19,chr19,chr19,chr19	-,-,+,-	LIM2,LOC147646,LOC100129083,LIM2	-215,1627,26908,-215
chr19:19301519-19302348	chr19	+	19301647	19301868	True	NM_001145784,NM_005919,NM_003721,NM_001145783,NM_134440,NR_027307,NR_027308	chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,+,-,+,-,-	LOC729991,LOC729991-MEF2B,RFXANK,LOC729991,RFXANK,LOC729991-MEF2B,LOC729991-MEF2B	1594,1594,1139,1594,1139,1594,1594
chr3:68069465-68070049	chr3	+	68069493	68070053	True	NM_213609,NM_003848	chr3,chr3	+,-	FAM19A1,SUCLG2	-16090,-364455
chr15:42387191-42388245	chr15	+	42387372	42388213	True	NM_198141,NM_178034	chr15,chr15	+,-	GANC,PLA2G4D	178152,-620
chr8:8085178-8085393	chr8	+	8085189	8085253	True	NR_024361,NR_031689,NR_024363,NR_024362	chr8,chr8,chr8,chr8	+,-,+,+	FLJ10661,MIR548I3,FLJ10661,FLJ10661	838,-138578,838,838
chr1:26855513-26855763	chr1	+	26855658	26855742	True	NM_002953,NM_173574	chr1,chr1	+,-	RPS6KA1,ZNF683	506,-156392
chr19:30300586-30301452	chr19	+	30300678	30301420	True	NM_001238,NM_057182,NM_031448	chr19,chr19,chr19	+,+,-	CCNE1,CCNE1,C19orf12	1480,2140,-94226
chr8:105353616-105355053	chr8	+	105353718	105354752	True	NM_001385,NM_030788	chr8,chr8	-,+	DPYS,TM7SF4	124575,-1715
chr17:78163916-78164133	chr17	+	78164055	78164135	True	NM_000199,NM_052819	chr17,chr17	-,+	SGSH,CARD14	30114,-2517
chr17:28446818-28448678	chr17	+	28447176	28448453	True	NR_036149,NM_032141,NR_029945	chr17,chr17,chr17	-,+,+	MIR3184,CCDC55,MIR423	-2998,-3407,-3144
chr19:54619879-54620330	chr19	+	54619944	54620102	True	NM_013342,NM_015629	chr19,chr19	-,+	TFPT,PRPF31	-889,-1206
chr4:25566719-25567472	chr4	+	25567029	25567461	True	NM_015187,NM_001177998	chr4,chr4	-,+	SEL1L3,SLC34A2	297207,89973
chr20:23401624-23402071	chr20	+	23401915	23402115	True	NM_138283,NM_022080	chr20,chr20	+,-	CSTL1,NAPB	18206,91
chr19:15574874-15575145	chr19	+	15574909	15574981	True	NM_022904,NR_031716	chr19,chr19	-,+	RASAL3,MIR1470	451,-14601
chr1:232653648-232654165	chr1	+	232653847	232654189	True	NM_020808,NM_019090	chr1,chr1	-,+	SIPA1L2,KIAA1383	-2604,286448
chr12:77462688-77463881	chr12	+	77463471	77463869	True	NM_203394,NM_015336	chr12,chr12	-,+	E2F7,ZDHHC17	-4111,-305672
chr14:77962994-77963512	chr14	+	77963235	77963429	True	NM_182509,NM_012111,NM_199296	chr14,chr14,chr14	-,+,-	ISM2,AHSA1,ISM2	1831,-38913,1831
chr15:45810068-45810820	chr15	+	45810205	45810726	True	NR_022014,NM_013309	chr15,chr15	+,-	HMGN2P46,SLC30A4	-6922,4326
chr13:50156823-50157032	chr13	+	50156823	50156963	True	NM_138450,NM_018191	chr13,chr13	+,-	ARL11,RCBTB1	45471,2808
chr9:116139652-116140274	chr9	+	116139806	116139888	True	NM_017688,NM_031219	chr9,chr9	+,-	BSPRY,HDHD3	-28049,-1465
chr3:44825823-44827562	chr3	+	44826029	44827439	True	NM_020242,NM_020696	chr3,chr3	+,-	KIF15,KIAA1143	-22871,-22856
chr22:24664852-24665971	chr22	+	24664966	24665690	True	NM_001145468,NM_015330,NM_004121	chr22,chr22,chr22	+,+,-	SPECC1L,SPECC1L,GGT5	1095,1095,-23856
chr3:33839852-33840072	chr3	+	33839859	33840119	True	NM_001162429,NR_027868,NM_013374,NM_015097	chr3,chr3,chr3,chr3	+,+,+,-	PDCD6IP,PDCD6IP,PDCD6IP,CLASP2	24,24,24,-80011
chr12:6597131-6599087	chr12	+	6597213	6598963	True	NM_016497,NM_014865	chr12,chr12	-,+	MRPL51,NCAPD2	3558,4334
chr10:50507706-50508780	chr10	+	50507715	50508697	True	NM_001080520,NM_199459,NM_001135196	chr10,chr10,chr10	-,+,+	DRGX,C10orf71,C10orf71	91260,-579,-579
chr19:1247121-1247582	chr19	+	1247424	1247546	True	NM_001001975,NM_152769,NM_001687,NM_177401	chr19,chr19,chr19,chr19	+,-,+,+	ATP5D,C19orf26,ATP5D,MIDN	-5727,-9434,-5727,1005
chr12:93826799-93828764	chr12	+	93827089	93828448	True	NM_003348,NM_014050	chr12,chr12	-,+	UBE2N,MRPL42	7629,32821
chr8:75923702-75924351	chr8	+	75923703	75924347	True	NM_031461,NM_020647	chr8,chr8	+,-	CRISPLD1,JPH1	-27051,-690141
chr3:150687406-150688891	chr3	+	150687720	150688916	True	NR_024066,NM_174878,NM_001195794	chr3,chr3,chr3	+,-,-	CLRN1OS,CLRN1,CLRN1	1548,1920,1920
chr1:44433950-44434431	chr1	+	44433960	44434479	True	NM_001039457,NM_001384,NM_004047,NM_006934,NM_001039589	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	ATP6V0B,DPH2,ATP6V0B,SLC6A9,DPH2	6122,1173,6122,48569,1173
chr19:9295825-9296819	chr19	+	9295824	9296867	True	NM_175883,NM_001005191	chr19,chr19	+,-	OR7D2,OR7D4	89,28730
chr16:66968091-66968326	chr16	+	66968109	66968315	True	NM_003869,NM_016062,NM_198061,NM_001128850,NM_004165,NR_024525,NR_036684	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,-,+,-,-,-,+	CES2,FAM96B,CES2,RRAD,RRAD,FAM96B,CES2	31,55,31,-8670,-8670,55,58
chrY:1460935-1461145	chrY	+	1460955	1461163	True	NM_001636,NR_026710,NR_026711	chrY,chrY,chrY	-,+,+	SLC25A6,ASMTL-AS1,ASMTL-AS1	30,8260,8260
chrY:1460935-1461145	chrX	+	1510955	1511163	False	NM_001636,NR_026710,NR_026711	chrX,chrX,chrX	-,+,+	SLC25A6,ASMTL-AS1,ASMTL-AS1	30,8260,8260
chr14:103567022-103567231	chr14	+	103567026	103567092	True	NM_001077594,NM_006035	chr14,chr14	+,-	EXOC3L4,CDC42BPB	-596,-43284
chr1:15930339-15931057	chr1	+	15930372	15931058	True	NM_032341,NM_024758	chr1,chr1	+,-	DDI2,AGMAT	12894,-18767
chr1:27501725-27503433	chr1	+	27502368	27503370	True	NM_015023,NM_003047	chr1,chr1	+,-	WDTC1,SLC9A1	57636,-20917
chr16:67876979-67877411	chr16	+	67876996	67877410	True	NM_025082,NM_020457,NM_005796	chr16,chr16,chr16	-,+,+	CENPT,THAP11,NUTF2	4001,-834,3408
chr10:81371415-81371678	chr10	+	81371595	81371679	True	NM_005411,NM_001093770,NM_001098668,NM_001164644,NM_001164645,NM_001164646,NM_001164647	chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,-,+,+,+,+	SFTPA1,SFTPA1,SFTPA2,SFTPA1,SFTPA1,SFTPA1,SFTPA1	-951,-951,-51432,-951,-951,-951,-951
chr11:128778623-128779178	chr11	+	128778795	128779149	True	NM_000890,NM_145013	chr11,chr11	+,-	KCNJ5,C11orf45	-17533,-3203
chr10:81107175-81107404	chr10	+	81107184	81107428	True	NM_005729,NM_153367	chr10,chr10	+,-	PPIF,ZCCHC24	-15,98005
chr14:77788308-77790156	chr14	+	77788432	77789612	True	NM_001513,NM_145870,NM_145871,NM_013382	chr14,chr14,chr14,chr14	+,+,+,-	GSTZ1,GSTZ1,GSTZ1,POMT2	-780,-1256,-1256,-1207
chr11:10590223-10590998	chr11	+	10590366	10590975	True	NM_006691,NR_034093	chr11,chr11	-,+	LYVE1,LOC100129827	-1,-27588
chr2:46932375-46933175	chr2	+	46932470	46933208	True	NM_144949,NM_173074,NM_014011	chr2,chr2,chr2	+,-,+	SOCS5,PIGF,SOCS5	-6172,-88219,-6422
chr1:155196551-155196922	chr1	+	155196605	155196971	True	NR_002188,NM_198883	chr1,chr1	-,+	GBAP1,MTX1	404,-18166
chr2:228039516-228040041	chr2	+	228039539	228039897	True	NM_000091,NM_000092	chr2,chr2	+,-	COL4A3,COL4A4	-10310,-10264
chr7:34863968-34865765	chr7	+	34863979	34865729	True	NR_015356,NM_207173	chr7,chr7	-,+	AAA1,NPSR1	8264,-166141
chr3:52033961-52035666	chr3	+	52034000	52035563	True	NM_000992,NM_001198898	chr3,chr3	-,+	RPL29,ACY1	-4042,-16751
chr14:52230671-52231443	chr14	+	52230875	52231327	True	NR_037676,NM_053064	chr14,chr14	-,+	C14orf82,GNG2	-112413,95722
chr17:46972579-46973149	chr17	+	46972654	46973064	True	NM_005175,NM_001002027,NM_007241	chr17,chr17,chr17	+,+,-	ATP5G1,ATP5G1,SNF8	-2557,-2557,49140
chr13:38443431-38443632	chr13	+	38443499	38443675	True	NM_016179,NM_003306,NM_001135956,NM_001135957,NM_001135955,NM_016617,NM_001135958	chr13,chr13,chr13,chr13,chr13,chr13,chr13	-,-,-,-,-,+,-	TRPC4,TRPC4,TRPC4,TRPC4,TRPC4,UFM1,TRPC4	314,314,314,314,314,480266,314
chr1:149856871-149857233	chr1	+	149856876	149857229	True	NM_175065,NM_003517,NM_003528	chr1,chr1,chr1	-,+,-	HIST2H2AB,HIST2H2AC,HIST2H2BE	2294,1295,1060
chr8:124819690-124821205	chr8	+	124819779	124821164	True	NM_004306,NM_144963	chr8,chr8	-,+	ANXA13,FAM91A1	-70132,-38948
chr11:46718707-46719865	chr11	+	46718714	46719776	True	NM_004308,NM_001184751,NM_024741	chr11,chr11,chr11	-,+,+	ARHGAP1,ZNF408,ZNF408	2394,2867,2540
chr10:71996658-71998446	chr10	+	71996905	71997411	True	NM_021129,NM_004096	chr10,chr10	-,+	PPA1,EIF4EBP2	-3715,166449
chr3:52740872-52741276	chr3	+	52740895	52741139	True	NM_001010983,NM_152932,NM_014041,NM_018446	chr3,chr3,chr3,chr3	-,-,+,-	GLT8D1,GLT8D1,SPCS1,GLT8D1	-847,-3273,-1089,-847
chr6:17705149-17705754	chr6	+	17705367	17705773	True	NM_005124,NM_016255	chr6,chr6	-,+	NUP153,FAM8A1	1095,-104908
chr8:66934175-66934421	chr8	+	66934258	66934429	True	NM_000756,NM_033105	chr8,chr8	-,+	CRH,DNAJC5B	156467,-525
chr5:159348547-159350192	chr5	+	159348648	159350052	True	NM_000679,NM_052927	chr5,chr5	+,-	ADRA1B,PWWP2A	-4960,196450
chr1:20988220-20988533	chr1	+	20988321	20988557	True	NM_032409,NM_005216	chr1,chr1	+,-	PINK1,DDOST	-28424,-284
chrX:133118988-133119212	chrX	+	133119050	133119220	True	NM_001164617,NM_001101357,NM_004484,NM_001164619,NM_001164618	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	GPC3,CCDC160,GPC3,GPC3,GPC3	503,251856,503,503,503
chr20:4794190-4794397	chr20	+	4794227	4794363	True	NM_014737,NM_170774,NM_012409	chr20,chr20,chr20	-,-,+	RASSF2,RASSF2,PRND	9978,1456,-91722
chr3:56828438-56829581	chr3	+	56828605	56829606	True	NM_019555,NR_024460	chr3,chr3	-,+	ARHGEF3,CCDC66	6443,-237473
chr19:54371440-54371894	chr19	+	54371600	54371890	True	NM_138373,NM_144687,NM_001020821,NM_001020820,NM_001020818,NM_001020819	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+	MYADM,NLRP12,MYADM,MYADM,MYADM,MYADM	-514,-43952,769,-2040,890,-514
chr15:77177030-77178540	chr15	+	77177298	77178199	True	NM_002902,NM_020843	chr15,chr15	+,-	RCN2,SCAPER	45762,-1081
chr6:42847734-42848341	chr6	+	42847746	42848245	True	NM_001008739,NM_198486	chr6,chr6	-,+	C6orf226,RPL7L1	10364,-126
chr1:110231235-110231580	chr1	+	110231439	110231557	True	NM_000561,NM_000849,NM_146421	chr1,chr1,chr1	+,-,+	GSTM1,GSTM3,GSTM1	-1072,52153,-1072
chr7:1782770-1783140	chr7	+	1782824	1783180	True	NM_001134340,NM_001128636	chr7,chr7	-,+	PSMG3,ELFN1	-173156,-34077
chr11:910399-910644	chr11	+	910545	910611	True	NM_012305,NM_001142675,NM_001142674,NM_001142677,NM_001142676,NM_023947	chr11,chr11,chr11,chr11,chr11,chr11	+,-,-,-,-,-	AP2A2,CHID1,CHID1,CHID1,CHID1,CHID1	15229,4497,313,313,313,313
chr19:12073542-12074203	chr19	+	12073773	12074115	True	NM_001080411,NM_001012753	chr19,chr19	-,+	ZNF433,ZNF763	72460,1753
chr12:77158301-77159639	chr12	+	77158416	77159386	True	NM_001321,NM_015336	chr12,chr12	-,+	CSRP2,ZDHHC17	113469,-613
chr2:229418975-229420762	chr2	+	229419231	229420427	True	NM_178821,NM_030623	chr2,chr2	+,-	WDR69,SPHKAP	-682957,-372870
chr8:145012293-145012525	chr8	+	145012345	145012495	True	NM_000837,NR_030383,NM_201384,NM_201381,NM_201383,NM_201382	chr8,chr8,chr8,chr8,chr8,chr8	+,-,-,-,-,-	GRINA,MIR661,PLEC,PLEC,PLEC,PLEC	51730,7002,1313,6460,4247,5665
chr18:13621710-13622099	chr18	+	13621806	13622132	True	NM_001098801,NM_181483,NM_004338	chr18,chr18,chr18	-,+,+	C18orf19,C18orf1,C18orf1	104509,-990,-990
chr21:46012943-46013746	chr21	+	46013079	46013553	True	NM_198689,NM_198688	chr21,chr21	+,-	KRTAP10-7,KRTAP10-6	6943,-693
chr8:91013202-91013546	chr8	+	91013223	91013483	True	NM_002485,NM_001359	chr8,chr8	-,+	NBN,DECR1	-16324,96
chr2:33699528-33700971	chr2	+	33699993	33700955	True	NM_015475,NM_001139488	chr2,chr2	-,+	FAM98A,RASGRP3	123457,365
chr11:46637203-46637727	chr11	+	46637209	46637753	True	NR_024589,NR_024588,NM_001205119,NR_024587,NM_014741,NM_173811,NM_001205121,NM_001205120,NM_001205122,NM_001142673	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,-,+,+,+,+	ATG13,ATG13,ATG13,ATG13,ATG13,HARBI1,ATG13,ATG13,ATG13,ATG13	1072,1072,1072,1072,1072,1074,1072,1072,1072,1072
chr6:33423044-33424073	chr6	+	33423117	33424101	True	NM_152735,NM_015921	chr6,chr6	+,-	ZBTB9,CUTA	-812,-37052
chr6:33423044-33424073	chr6_ssto_hap7	+	4903361	4904345	False	NM_001014840	chr6_ssto_hap7	-	CUTA	-37050
chr17:58211184-58212148	chr17	+	58211588	58212194	True	NM_000717,NR_027408	chr17,chr17	+,-	CA4,LOC653653	15107,-31308
chr6:136611327-136611585	chr6	+	136611428	136611584	True	NM_001077441,NM_001077440,NM_018945,NM_014739	chr6,chr6,chr6,chr6	-,-,+,-	BCLAF1,BCLAF1,PDE7B,BCLAF1	-439,-439,-438645,-439
chr5:39070545-39071599	chr5	+	39070857	39071615	True	NM_003999,NM_152756	chr5,chr5	+,-	OSMR,RICTOR	-224814,2942
chr9:90389735-90390491	chr9	+	90389734	90390548	True	NR_027917,NM_001039803	chr9,chr9	+,-	CTSL3,CDK20	-1965,199205
chr11:47431332-47431747	chr11	+	47431367	47431647	True	NM_002804,NM_001128225,NM_152264	chr11,chr11,chr11	-,+,+	PSMC3,SLC39A13,SLC39A13	16427,-1372,-1372
chr14:103778670-103779309	chr14	+	103778706	103779288	True	NR_033938,NM_001969	chr14,chr14	-,+	LOC100131366,EIF5	-123341,21204
chr1:209818163-209818781	chr1	+	209818328	209818746	True	NM_001127641,NM_001017402,NM_015714,NM_000228	chr1,chr1,chr1,chr1	-,-,+,-	LAMB3,LAMB3,G0S2,LAMB3	6978,5983,29923,7124
chr6:54714686-54716361	chr6	+	54714700	54715938	True	NM_001010872,NM_001042406	chr6,chr6	+,-	FAM83B,HMGCLL1	-3196,728131
chr1:160806609-160807117	chr1	+	160806663	160807149	True	NM_002348,NM_001166663	chr1,chr1	+,-	LY9,CD244	-40786,25593
chr1:21112171-21112571	chr1	+	21112181	21112609	True	NM_016287,NM_032409	chr1,chr1	-,+	HP1BP3,PINK1	622,-152284
chr5:138724858-138725091	chr5	+	138724863	138725137	True	NM_001033112,NM_016459,NM_005847,NM_152685,NM_001161546	chr5,chr5,chr5,chr5,chr5	+,-,-,-,-	PAIP2,MZB1,SLC23A1,SLC23A1,LOC389333	-46785,518,-5824,-5824,5798
chr21:21630423-21631106	chr21	+	21630555	21631137	True	NM_004540,NR_024090	chr21,chr21	+,-	NCAM2,C21orf131	739495,544339
chr22:20848657-20849389	chr22	+	20849035	20849265	True	NM_001003891,NR_033825,NM_032775	chr22,chr22,chr22	+,-,-	MED15,KLHL22,KLHL22	12620,955,955
chr2:71295203-71295444	chr2	+	71295206	71295424	True	NM_032601,NM_017567	chr2,chr2	-,+	MCEE,NAGK	62020,-17
chr4:166314964-166315532	chr4	+	166315063	166315569	True	NR_030304,NR_026575	chr4,chr4	+,-	MIR578,GK3P	-7727,-113888
chr17:34206-35609	chr17	+	34262	35626	True	NM_001013672,NM_003585	chr17,chr17	+,-	C17orf97,DOC2B	224491,-2842
chr14:69956742-69957642	chr14	+	69957017	69957539	True	NM_001161498,NR_024630	chr14,chr14	+,-	UPF0639,C14orf162	-5597,80429
chr2:218930200-218930591	chr2	+	218930217	218930631	True	NM_198483,NR_002712	chr2,chr2	+,-	RUFY4,CXCR2P1	3106,-4204
chr15:41953830-41954104	chr15	+	41953837	41954137	True	NM_001080541,NM_015540,NM_001164273	chr15,chr15,chr15	+,-,+	MGA,RPAP1,MGA	-1278,-117373,-1278
chr4:186993409-186994350	chr4	+	186994002	186994357	True	NM_021069,NM_003265	chr4,chr4	-,+	SORBS2,TLR3	-116132,-3744
chr4:84258477-84260280	chr4	+	84258772	84260296	True	NM_006665,NM_001098540,NM_001166498,NM_001199830,NM_016067	chr4,chr4,chr4,chr4,chr4	-,-,-,-,+	HPSE,HPSE,HPSE,HPSE,MRPS18C	-2466,-2738,-2466,-2806,116821
chr18:70529946-70531174	chr18	+	70530162	70531185	True	NM_014177,NM_138999,NM_001201465,NM_138966	chr18,chr18,chr18,chr18	+,-,-,-	C18orf55,NETO1,NETO1,NETO1	1284560,1799,3675,3675
chr17:18382193-18382556	chr17	+	18382220	18382544	True	NR_003554,NM_001040078	chr17,chr17	-,+	LOC220594,LGALS9C	42072,-2172
chr17:18382193-18382556	chr17	-	20368406	20368730	False	NM_001190790,NM_001042685	chr17,chr17	+,-	CDRT15L2,LGALS9B	114306,2168
chr1:114351815-114353654	chr1	+	114352009	114353693	True	NR_037864,NM_018364	chr1,chr1	+,-	LOC100287722,RSBN1	45563,1429
chr1:25867169-25867590	chr1	+	25867305	25867639	True	NM_015627,NM_138618	chr1,chr1	+,-	LDLRAP1,RHCE	2436,-119942
chr10:75928219-75928461	chr10	+	75928319	75928387	True	NM_001123,NM_001202449,NM_207012	chr10,chr10,chr10	+,+,-	ADK,ADK,AP3M1	7859,7859,-17493
chr8:26432589-26433515	chr8	+	26432959	26433553	True	NM_001386,NM_007257	chr8,chr8	+,-	DPYSL2,PNMA2	1867,-61476
chr11:111249235-111249748	chr11	+	111249243	111249655	True	NM_001136105,NM_006235	chr11,chr11	+,-	C11orf93,POU2AF1	-79318,552
chr19:35773260-35774788	chr19	+	35773274	35774516	True	NM_001199216,NM_152481,NM_002361,NM_080600,NM_021175	chr19,chr19,chr19,chr19,chr19	+,-,+,+,+	MAG,FAM187B,MAG,MAG,HAMP	8472,-53646,8472,8472,85
chr1:147243959-147244776	chr1	+	147244078	147244683	True	NM_005266,NM_005267	chr1,chr1	-,+	GJA5,GJA8	858,130262
chr4:117519519-117519772	chr4	+	117519529	117519789	True	NM_152402,NR_031737	chr4,chr4	-,+	TRAM1L1,MIR1973	486997,-298699
chrX:119693770-119694650	chrX	+	119693885	119694567	True	NM_014060,NM_001079872	chrX,chrX	+,-	MCTS1,CUL4B	43176,300
chr8:1444622-1445291	chr8	+	1444688	1445268	True	NM_004745,NR_033895	chr8,chr8	+,-	DLGAP2,LOC286083	4300,-193861
chr6:118240683-118241241	chr6	+	118240766	118241088	True	NM_020399,NM_001029858	chr6,chr6	-,+	GOPC,SLC35F1	-317061,-12128
chr8:99092060-99093875	chr8	+	99092121	99093691	True	NM_000989,NM_173549,NM_005836	chr8,chr8,chr8	-,+,-	RPL30,C8orf47,HRSP12	-34303,-15430,35778
chr5:141336957-141337251	chr5	+	141336986	141337294	True	NM_016580,NM_183399,NM_001201365	chr5,chr5,chr5	-,+,+	PCDH12,RNF14,RNF14	1383,9107,9107
chr13:114588603-114589526	chr13	+	114588792	114589526	True	NM_000820,NR_024609	chr13,chr13	-,+	GAS6,FLJ44054	-21746,-2233
chr15:23440849-23441552	chr15	+	23440946	23441304	True	NR_002824,NR_033350	chr15,chr15	-,+	HERC2P2,GOLGA8E	-62687,-5927
chr15:23440849-23441552	chr15	+	20773548	20774236	False	NM_001145004,NR_027411	chr15,chr15	-,+	GOLGA6L6,GOLGA8C	-26434,-5925
chr15:23440849-23441552	chr15	+	28629656	28629706	False	NM_004667,NR_033351,NR_033353	chr15,chr15,chr15	-,+,+	HERC2,GOLGA8F,GOLGA8G	-62361,-5923,-5923
chr15:23440849-23441552	chr15	-	28772220	28772270	False	NR_036443,NR_033351,NR_033353	chr15,chr15,chr15	+,-,-	HERC2P9,GOLGA8F,GOLGA8G	127317,5923,5923
chr20:46019544-46021300	chr20	+	46019726	46021193	True	NM_183048,NR_024594	chr20,chr20	-,+	ZMYND8,LOC100131496	-34252,-72532
chr10:105831447-105832803	chr10	+	105831516	105832788	True	NM_145247,NM_000494	chr10,chr10	+,-	MEIR5,COL17A1	49027,12900
chr18:67628996-67630253	chr18	+	67629060	67630132	True	NM_006566,NM_004232	chr18,chr18	-,+	CD226,SOCS6	-4828,326004
chr14:74227103-74228391	chr14	+	74227332	74228377	True	NM_194278,NM_001146154	chr14,chr14	-,+	C14orf43,PTGR2	-331,90156
chr16:75152876-75153217	chr16	+	75152890	75153266	True	NM_153486,NM_194436,NM_153688	chr16,chr16,chr16	-,-,+	LDHD,LDHD,ZFP1	-2220,-2220,29154
chr10:71813769-71814538	chr10	+	71813962	71814586	True	NM_018649,NM_001198696	chr10,chr10	+,-	H2AFY2,AIFM2	-1656,78154
chr11:27077963-27078535	chr11	+	27078094	27078284	True	NM_003986,NM_030771	chr11,chr11	+,-	BBOX1,CCDC34	-15645,306561
chr13:33002651-33002969	chr13	+	33002693	33002925	True	NM_000059,NM_052818,NM_001079691	chr13,chr13,chr13	+,-,-	BRCA2,N4BP2L1,N4BP2L1	-113127,-378,-378
chr16:20661030-20662873	chr16	+	20661242	20662449	True	NM_202000,NM_052956	chr16,chr16	+,-	ACSM3,ACSM1	112862,40188
chr16:67311201-67311928	chr16	+	67311293	67311899	True	NM_013241,NM_015432,NM_001129728,NM_001129729,NM_001129727,NM_001129731	chr16,chr16,chr16,chr16,chr16,chr16	-,+,+,+,+,+	FHOD1,PLEKHG4,PLEKHG4,PLEKHG4,PLEKHG4,PLEKHG4	-29868,69,1150,1589,176,1592
chrX:84271666-84273471	chrX	+	84271920	84273331	True	NM_001012980,NM_198450	chrX,chrX	-,+	SATL1,APOOL	90694,-13074
chr20:34042528-34042868	chr20	+	34042573	34042861	True	NM_007186,NM_000557	chr20,chr20	+,-	CEP250,GDF5	361,-16546
chr11:85339190-85339551	chr11	+	85339354	85339514	True	NR_036465,NM_001193537,NM_001193538,NM_001142699,NM_018480	chr11,chr11,chr11,chr11,chr11	+,+,+,-,+	TMEM126B,TMEM126B,TMEM126B,DLG2,TMEM126B	107,107,107,-1040,107
chr12:56214733-56215352	chr12	+	56214733	56215205	True	NR_026723,NR_026722,NR_036478,NR_036479,NM_032364,NM_033082,NR_036476,NR_036477,NM_014182	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,-,+,+,-,-,+,+,+	SARNP,SARNP,LOC440104,LOC440104,DNAJC14,SARNP,LOC440104,LOC440104,ORMDL2	-3193,-3193,8186,8186,8270,-3193,8186,8186,-2978
chr5:99402230-99403112	chr5	+	99402265	99402443	True	NM_198507,NR_027503	chr5,chr5	+,-	FAM174A,LOC100133050	468680,321565
chr5:99402230-99403112	chr5	-	98869603	98869748	False	NM_001270,NR_036530	chr5,chr5	-,+	CHD1,LOC100289230	-607365,-604819
chr5:99402230-99403112	chr5	+	99715690	99715871	False	NM_198507,NR_027503	chr5,chr5	+,-	FAM174A,LOC100133050	155252,8137
chr12:3067025-3067975	chr12	+	3067064	3067832	True	NM_003213,NM_202003,NM_201443,NM_201441	chr12,chr12,chr12,chr12	+,-,+,+	TEAD4,FOXM1,TEAD4,TEAD4	645,-80761,915,645
chr9:124261333-124261805	chr9	+	124261364	124261783	True	NR_003191,NM_032552	chr9,chr9	-,+	GGTA1,DAB2IP	573,67615
chr9:135904237-135904759	chr9	+	135904599	135904661	True	NM_001122823,NM_001162427,NM_012087	chr9,chr9,chr9	+,-,+	GTF3C5,TSC1,GTF3C5	1400,-84579,1400
chrX:119743196-119743896	chrX	+	119743385	119743855	True	NM_014060,NM_001137554,NM_001011551	chrX,chrX,chrX	+,+,-	MCTS1,MCTS1,C1GALT1C1	-5700,-4892,20205
chr12:121453237-121453828	chr12	+	121453346	121453754	True	NM_022895,NM_000545	chr12,chr12	-,+	C12orf43,HNF1A	596,-36862
chr9:32780523-32782006	chr9	+	32780576	32782019	True	NM_212558,NM_153809	chr9,chr9	+,-	TMEM215,TAF1L	1477,-144909
chr2:220145416-220145862	chr2	+	220145472	220145874	True	NM_001039550,NR_029688,NM_006736	chr2,chr2,chr2	+,-,+	DNAJB2,MIR153-1,DNAJB2	-1483,13098,-1483
chr7:4901501-4901796	chr7	+	4901638	4901837	True	NM_020144,NM_014855	chr7,chr7	-,+	PAPOLB,KIAA0415	-13,-86427
chr19:37342583-37343080	chr19	+	37342653	37343002	True	NM_003419,NM_206894	chr19,chr19	+,-	ZNF345,ZNF790	-1444,-13369
chr16:684605-685958	chr16	+	684604	685800	True	NM_001040165,NM_001040160,NM_001040161,NM_001040162,NM_053284,NM_138418,NM_032366	chr16,chr16,chr16,chr16,chr16,chr16,chr16	-,-,-,-,+,+,-	C16orf13,C16orf13,C16orf13,C16orf13,WFIKKN1,FAM195A,C16orf13	597,597,597,597,-3643,6048,597
chr11:61889699-61890098	chr11	+	61889871	61889989	True	NM_001040694,NM_002032,NM_020238	chr11,chr11,chr11	+,-,+	INCENP,FTH1,INCENP	1455,-154739,1455
chr2:182860650-182861676	chr2	+	182860777	182861685	True	NM_002500,NM_001080545	chr2,chr2	-,+	NEUROD1,PPP1R1C	-315385,-10284
chr17:38297189-38298744	chr17	+	38297222	38298684	True	NM_021724,NM_007359	chr17,chr17	-,+	NR1D1,CASC3	-40249,-766
chr3:187929230-187929511	chr3	+	187929248	187929552	True	NM_005578,NR_036497	chr3,chr3	+,-	LPP,LOC339929	1168,-57372
chr15:35411402-35412842	chr15	+	35411513	35412637	True	NM_014106,NR_003144	chr15,chr15	-,+	ZNF770,LOC723972	-131016,116889
chr5:175139581-175139839	chr5	+	175139585	175139801	True	NM_022304,NM_032361	chr5,chr5	+,-	HRH2,THOC3	-31172,255794
chr12:351724-352315	chr12	+	351749	352079	True	NM_001130147,NM_001190997	chr12,chr12	+,-	CCDC77,SLC6A13	146436,20016
chr4:26321152-26321417	chr4	+	26321227	26321427	True	NM_203284,NM_015874,NM_203283,NM_005349,NM_000730	chr4,chr4,chr4,chr4,chr4	+,+,+,+,-	RBPJ,RBPJ,RBPJ,RBPJ,CCKAR	1020,1020,-18,-18,170665
chr1:231158770-231159180	chr4	+	2516470	2516882	True	NM_001172657,NM_001185009	chr4,chr4	-,+	ZFYVE28,RNF4	-96100,-45703
chr3:107240194-107241397	chr3	+	107240636	107241430	True	NM_001142568,NM_020235,NR_028303	chr3,chr3,chr3	+,+,-	BBX,BBX,LOC100302640	352,352,-281151
chrX:78421153-78422026	chrX	+	78421252	78421859	True	NM_001171581,NM_032553	chrX,chrX	-,+	ITM2A,GPR174	201249,4609
chr19:46808924-46809479	chr19	+	46808928	46809478	True	NM_152796,NM_152795,NM_152794,NM_022462,NM_032040	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	HIF3A,HIF3A,HIF3A,HIF3A,CCDC8	-7347,-8677,-2124,-7347,107491
chr11:18417470-18417721	chr11	+	18417470	18417766	True	NR_028500,NM_001165416,NM_001165414,NM_001165415,NM_005566,NM_181508,NM_001135239	chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,-,+	LDHA,LDHA,LDHA,LDHA,LDHA,HPS5,LDHA	-1585,-1585,46,-1585,-1585,-73749,-1585
chr19:7292542-7293079	chr19	+	7292630	7293040	True	NM_000208,NM_001079817,NM_015318	chr19,chr19,chr19	-,-,+	INSR,INSR,ARHGEF18	1021,1021,166958
chr10:25010179-25010659	chr10	+	25010181	25010573	True	NM_020824,NM_024838	chr10,chr10	-,+	ARHGAP21,THNSL1	2074,294934
chr10:50885298-50887047	chr10	+	50885318	50886903	True	NM_182554,NM_001042427,NM_001143996	chr10,chr10,chr10	+,+,-	C10orf53,C10orf53,OGDHL	780,780,83579
chr6:1613846-1614190	chr6	+	1613879	1614163	True	NM_001453,NR_027116	chr6,chr6	+,-	FOXC1,LOC285768	-3257,-512312
chr19:6134325-6134700	chr19	+	6134420	6134553	True	NM_134433,NM_030924	chr19,chr19	-,+	RFX2,ACSBG2	-23756,1156
chr1:230208494-230209356	chr1	+	230208515	230209367	True	NM_004481,NM_024554	chr1,chr1	+,-	GALNT2,PGBD5	-5610,304074
chr11:61736092-61736817	chr11	+	61736174	61736668	True	NM_004183,NM_002032	chr11,chr11	+,-	BEST1,FTH1	-18869,-1042
chr15:45114629-45116583	chr15	+	45114784	45116607	True	NM_182985,NM_001145112	chr15,chr15	+,-	TRIM69,PATL2	-86275,-145698
chr15:45114629-45116583	chr15	-	45368377	45369063	False	NM_207581,NM_014080	chr15,chr15	+,-	DUOXA2,DUOX2	37459,37359
chr17:18162952-18163593	chr17	+	18163113	18163587	True	NM_001144900,NM_148886,NM_002018,NM_139162	chr17,chr17,chr17,chr17	+,+,-,+	SMCR7,SMCR7,FLII,SMCR7	260,836,-1058,260
chr8:145049169-145049417	chr8	+	145049265	145049387	True	NM_201378,NM_000837,NM_000445	chr8,chr8,chr8	-,+,-	PLEC,GRINA,PLEC	-1568,14838,1576
chr2:242752608-242752895	chr2	+	242752752	242752834	True	NM_001167599,NM_005018,NM_080741,NM_001167601,NM_001167600,NM_001167602	chr2,chr2,chr2,chr2,chr2,chr2	+,-,+,+,+,+	NEU4,PDCD1,NEU4,NEU4,NEU4,NEU4	-773,48274,-773,-2643,-2643,-773
chr19:34114292-34114923	chr19	+	34114469	34114941	True	NM_001166057,NM_001127895,NM_001127896	chr19,chr19,chr19	-,+,+	PEPD,CHST8,CHST8	-101670,-1659,-1647
chr22:29999233-29999465	chr22	+	29999243	29999507	True	NM_016418,NM_003634,NM_181825,NM_181832,NM_181833,NM_181830,NM_181831,NM_000268,NM_181829,NM_181828	chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22	+,-,+,+,+,+,+,+,+,+	NF2,NIPSNAP1,NF2,NF2,NF2,NF2,NF2,NF2,NF2,NF2	37,-21917,37,37,37,37,37,37,37,37
chr11:313406-313753	chr11	+	313561	313703	True	NM_006435,NM_021034,NM_003641	chr11,chr11,chr11	+,-,+	IFITM2,IFITM3,IFITM1	-5505,7261,287
chrX:69396940-69397908	chrX	+	69397080	69397606	True	NM_002565,NM_198512	chrX,chrX	-,+	P2RY4,DGAT2L6	82098,65
chrX:152906136-152906891	chrX	+	152906235	152906883	True	NM_001395,NM_001135740	chrX,chrX	+,-	DUSP9,PNCK	1013,31910
chr21:41121437-41122317	chr21	+	41121644	41122269	True	NR_026543,NM_001080444	chr21,chr21	-,+	C21orf88,IGSF5	-136895,-4361
chr1:219715851-219716081	chr1	+	219715866	219716135	True	NM_138794,NM_018713	chr1,chr1	+,-	LYPLAL1,SLC30A10	-368725,385913
chr1:93637886-93639605	chr1	+	93637927	93639508	True	NM_016040,NM_206886,NM_001167830,NR_030761	chr1,chr1,chr1,chr1	-,+,-,-	TMED5,CCDC18,TMED5,TMED5	6795,6772,6795,6795
chr3:182880078-182880316	chr3	+	182880082	182880346	True	NM_032047,NM_014398	chr3,chr3	+,-	B3GNT5,LAMP3	90685,371
chr1:46086393-46087000	chr1	+	46086510	46086926	True	NM_001190182,NM_001114938,NM_152298	chr1,chr1,chr1	-,-,+	CCDC17,CCDC17,NASP	2855,2855,-36901
chr3:49459608-49459822	chr3	+	49459624	49459826	True	NR_028435,NM_022171,NM_000481,NM_032316,NM_001164712,NM_001164710,NM_001164711	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-,-	AMT,TCTA,AMT,NICN1,AMT,AMT,AMT	335,-10036,335,6981,335,335,335
chr17:73900102-73900340	chr17	+	73900160	73900376	True	NM_173547,NM_001113324,NM_032478	chr17,chr17,chr17	-,+,-	TRIM65,C17orf106,MRPL38	-7106,74921,855
chr1:67648362-67649944	chr1	+	67648457	67649603	True	NM_001013674,NM_144701	chr1,chr1	-,+	C1orf141,IL23R	-54237,-16344
chr5:133454236-133454631	chr5	+	133454296	133454452	True	NM_001134851,NR_033449,NM_003202,NM_213648,NM_006930,NM_201632,NM_201634	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,-,+,+	TCF7,TCF7,TCF7,TCF7,SKP1,TCF7,TCF7	-3049,-2997,-3945,-3049,58322,-3049,-3049
chr17:47753101-47754428	chr17	+	47753408	47754471	True	NM_001007226,NM_001007227,NM_001007230,NM_003563,NM_001007228,NM_001007229,NM_007225	chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,-,+	SPOP,SPOP,SPOP,SPOP,SPOP,SPOP,NXPH3	1110,1110,1110,1110,1110,1110,-100161
chr3:101431098-101432645	chr6	+	151148896	151148946	True	NM_020861,NM_015440	chr6,chr6	-,+	ZBTB2,MTHFD1L	563781,37744
chr20:46990399-46991410	chr20	+	46990513	46991048	True	NR_026958,NM_020820	chr20,chr20	+,-	LOC284749,PREX1	-1928,453422
chrX:108968891-108970239	chrX	+	108969019	108970286	True	NM_004458,NM_022977,NM_018698	chrX,chrX,chrX	-,-,+	ACSL4,ACSL4,NXT2	6386,6386,-190065
chr7:148131739-148132705	chr7	+	148131780	148132554	True	NM_145304,NM_001203249	chr7,chr7	+,-	C7orf33,EZH2	155102,448097
chr16:28072373-28072837	chr16	+	28072493	28072775	True	NM_001024401,NM_001109763	chr16,chr16	+,-	SBK1,GSG1L	231064,2105
chr8:1457005-1457218	chr8	+	1457094	1457170	True	NM_004745,NR_033895	chr8,chr8	+,-	DLGAP2,LOC286083	-7584,-206267
chr19:18902305-18902525	chr19	+	18902510	18902570	True	NM_000095,NM_002911	chr19,chr19	-,+	COMP,UPF1	-396,40173
chr16:3099569-3100094	chr16	+	3099579	3100141	True	NM_001103175,NM_022468	chr16,chr16	-,+	CCDC64B,MMP25	-14037,-2948
chr17:33480082-33481768	chr17	+	33480115	33481696	True	NM_173167,NM_018096,NM_001033576	chr17,chr17,chr17	+,-,+	UNC45B,NLE1,UNC45B	-5337,-10793,-5337
chr19:1130888-1131164	chr19	+	1130913	1131123	True	NM_001100122,NM_001039848	chr19,chr19	-,+	SBNO2,GPX4	1200,-26315
chr5:176075732-176076024	chr5	+	176075757	176075959	True	NM_003085,NM_130465,NM_012171,NM_001006616	chr5,chr5,chr5,chr5	-,+,+,+	SNCB,TSPAN17,TSPAN17,TSPAN17	-18200,-1420,-1420,-1420
chr8:94763138-94764862	chr8	+	94763275	94764896	True	NM_001142301,NR_024522,NM_203390,NM_153704	chr8,chr8,chr8,chr8	+,+,-,+	TMEM67,TMEM67,RBM12B,TMEM67	2175,2175,-10051,2175
chr16:28832194-28833355	chr16	+	28832358	28833086	True	NM_007245,NM_003321,NM_145714,NM_148416,NM_148415,NM_148414	chr16,chr16,chr16,chr16,chr16,chr16	+,-,+,+,+,+	ATXN2L,TUFM,ATXN2L,ATXN2L,ATXN2L,ATXN2L	1327,24694,1327,1327,1327,1327
chrX:119074844-119076107	chrX	+	119075143	119076150	True	NM_024528,NM_178813	chrX,chrX	-,+	NKAP,AKAP14	1637,-45265
chr1:75192185-75193170	chr1	+	75192212	75193046	True	NM_001134759,NM_001162916,NM_001130043,NM_001130042,NR_027962,NM_138467,NM_001889	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,+,-,-,+,+,-	CRYZ,TYW3,CRYZ,CRYZ,TYW3,TYW3,CRYZ	6096,5789,6096,6096,5815,5793,6096
chr5:175392721-175394178	chr5	+	175392786	175394208	True	NM_032361,NM_001008220	chr5,chr5	-,+	THOC3,CPLX2	1387,-94349
chr5:175392721-175394178	chr5	-	177303594	177305016	False	NR_003615,NM_173663	chr5,chr5	+,-	LOC728554,FAM153A	-1383,-96089
chr1:236850267-236850524	chr1	+	236850298	236850533	True	NM_018072,NM_001103	chr1,chr1	-,+	HEATR1,ACTN2	-82457,-579
chr4:80246785-80247050	chr4	+	80246789	80247041	True	NM_032693,NR_026555	chr4,chr4	-,+	NAA11,GDEP	180,501583
chr5:92917863-92919333	chr5	+	92918050	92918975	True	NR_021490,NR_021491,NM_005654	chr5,chr5,chr5	-,-,+	FLJ42709,FLJ42709,NR2F1	-1047,-1097,67
chr18:44528428-44529018	chr18	+	44528758	44528832	True	NM_001100817,NM_031303	chr18,chr18	-,+	TCEB3CL,KATNAL2	15599,-2031
chr13:50510838-50511069	chr13	+	50510838	50511024	True	NR_023351,NR_003268,NM_020456,NM_001127482	chr13,chr13,chr13,chr13	-,+,-,-	C13orf1,CTAGE10P,C13orf1,C13orf1	-213,-46344,-213,-213
chr1:161546434-161547650	chr1	+	161546451	161547491	True	NM_201563,NM_001127596	chr1,chr1	+,-	FCGR2C,FCGR3A	3637,-26038
chr1:161546434-161547650	chr1	+	161628291	161629331	False	NM_004001,NM_001002273,NM_001190828,NM_001002274,NM_001002275,NR_002595	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-	FCGR2B,FCGR2B,FCGR2B,FCGR2B,FCGR2B,RPL31P11	3573,3573,3573,3573,3573,25765
chr21:45710770-45711078	chr21	+	45710803	45711015	True	NR_024108,NM_000658,NM_000383,NM_175867,NM_002626	chr21,chr21,chr21,chr21,chr21	+,+,+,-,+	PFKL,AIRE,AIRE,DNMT3L,PFKL	8909,-580,-5091,-28704,8914
chr21:32413890-32414172	chr21	+	32413893	32414213	True	NM_001128077,NM_001099219	chr21,chr21	+,-	KRTAP20-3,KRTAP19-8	-398761,-3098
chr2:203778039-203779898	chr7	-	123171176	123172064	False	NM_080928,NM_178827	chr7,chr7	+,-	ASB15,IQUB	77047,2711
chr2:203778039-203779898	chr2	+	203778189	203779609	True	NM_024744,NM_018256,NM_001104586	chr2,chr2,chr2	+,-,+	ALS2CR8,WDR12,ALS2CR8	-1130,-1240,-1269
chrX:131345451-131347064	chrX	+	131345538	131346869	True	NM_021183,NM_001042452	chrX,chrX	-,+	RAP2C,MST4	5382,-187961
chr10:21457832-21458337	chr10	+	21458191	21458373	True	NM_001173484,NM_001195627,NM_213569	chr10,chr10,chr10	-,+,-	NEBL,MLLT10,NEBL	4793,364727,4793
chr20:2489318-2489540	chr20	+	2489354	2489588	True	NM_024325,NM_080751	chr20,chr20	-,+	ZNF343,TMC2	240,27664
chr12:116710289-116710703	chr12	+	116710461	116710724	True	NR_027345,NM_015335	chr12,chr12	+,-	NCRNA00173,MED13L	260502,4324
chr10:72545676-72546209	chr10	+	72545691	72546215	True	NM_003901,NM_152710	chr10,chr10	+,-	SGPL1,C10orf27	29488,-534
chr1:8386136-8386631	chr1	+	8386253	8386661	True	NM_001042682,NM_001080397	chr1,chr1	-,+	RERE,SLC45A1	97136,-1928
chr19:43855880-43857072	chr19	+	43856304	43856828	True	NM_020406,NR_026881,NM_002784	chr19,chr19,chr19	+,+,-	CD177,PRG1,PSG9	996,-3147,-82622
chr9:37636763-37637053	chr9	+	37636772	37637048	True	NM_014907,NM_001134485	chr9,chr9	+,-	FRMPD1,TOMM5	14003,-44136
chr13:50015426-50016795	chr13	+	50015708	50016619	True	NM_031915,NM_001079670,NM_001160308	chr13,chr13,chr13	+,-,+	SETDB2,CAB39L,SETDB2	1809,1659,9068
chr2:216974320-216974852	chr2	+	216974514	216974864	True	NM_018441,NM_021141	chr2,chr2	-,+	PECR,XRCC5	-27975,-545
chr19:10694817-10695110	chr19	+	10694890	10694986	True	NM_001145056,NM_005498	chr19,chr19	+,-	SLC44A2,AP1M2	18134,3055
chr2:24581071-24582619	chr2	+	24581099	24582604	True	NM_001040710,NM_006277,NM_019595,NM_147152	chr2,chr2,chr2,chr2	+,-,-,-	C2orf84,ITSN2,ITSN2,ITSN2	-183179,853,853,853
chr5:16465919-16466277	chr5	+	16465923	16466317	True	NM_033414,NM_006317	chr5,chr5	-,+	ZNF622,BASP1	-29,751432
chrX:48054798-48055393	chrX	+	48054802	48055346	True	NM_175723,NM_021015,NM_005635	chrX,chrX,chrX	-,-,+	SSX5,SSX5,SSX1	915,915,59450
chr1:48282218-48283756	chr1	+	48282342	48283716	True	NM_001194986,NM_004474	chr1,chr1	-,+	LOC388630,FOXD2	178896,-380711
chr10:22634405-22634613	chr10	+	22634406	22634624	True	NM_172242,NM_012443,NR_036533	chr10,chr10,chr10	+,+,-	SPAG6,SPAG6,LOC100499489	-58,-58,92284
chr10:7453939-7454280	chr10	+	7453950	7454259	True	NM_002216,NM_001018039,NM_001029880	chr10,chr10,chr10	+,-,-	ITIH2,SFMBT2,SFMBT2	290976,-2647,-502
chr15:74906815-74907099	chr15	+	74906844	74907005	True	NM_001130028,NM_003992,NM_001142443	chr15,chr15,chr15	+,+,-	CLK3,CLK3,EDC3	329,-6182,81431
chr20:4702222-4702462	chr20	+	4702228	4702437	True	NR_024267,NM_012409	chr20,chr20	-,+	PRNT,PRND	18928,118
chr17:46016323-46017123	chr17	+	46016383	46016921	True	NM_024320,NM_018129	chr17,chr17	-,+	PRR15L,PNPO	18239,1967
chr10:44879252-44880145	chr10	+	44879321	44879958	True	NM_001178134,NM_000609,NM_199168,NR_033846,NM_001033886	chr10,chr10,chr10,chr10,chr10	-,-,-,+,-	CXCL12,CXCL12,CXCL12,LOC283033,CXCL12	637,637,637,-474620,637
chr1:20512308-20512525	chr1	+	20512411	20512475	True	NM_001105572,NM_152376	chr1,chr1	-,+	PLA2G2C,UBXN10	-10724,102
chr1:23853191-23854355	chr1	+	23853443	23854287	True	NM_004091,NR_027042	chr1,chr1	-,+	E2F2,MDS2	3475,99536
chr3:190098925-190100882	chr3	+	190099106	190100799	True	NM_021101,NM_006580	chr3,chr3	-,+	CLDN1,CLDN16	-58871,4861
chr11:49230207-49230542	chr11	+	49230287	49230471	True	NM_001193471,NM_001014986,NM_001193473,NM_001193472,NR_027044,NM_004476	chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,+,-	FOLH1,FOLH1,FOLH1,FOLH1,LOC440040,FOLH1	-65,-65,-65,-65,349608,-65
chr15:25417901-25419082	chr15	+	25418054	25418896	True	NR_003304,NM_130838,NR_003298,NR_003299,NR_003301,NR_001291,NR_003302,NR_003296,NR_003297,NR_003294,NR_003295	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,-,+,+,+,+,+,+,+,+,+	SNORD115-12,UBE3A,SNORD115-6,SNORD115-7,SNORD115-9,SNORD115-1,SNORD115-10,SNORD115-4,SNORD115-5,SNORD115-2,SNORD115-3	4991,231807,6747,8635,4991,-2235,4991,3082,4988,-323,1177
chr17:6543735-6543941	chr17	+	6543856	6543990	True	NM_014804,NM_032731	chr17,chr17	-,+	KIAA0753,TXNDC17	307,231
chr6:44186837-44187195	chr6	+	44186843	44187123	True	NM_004955,NM_178148,NM_001078174,NM_001078175,NM_001078176,NM_001078177	chr6,chr6,chr6,chr6,chr6,chr6	+,-,+,+,+,+	SLC29A1,SLC35B2,SLC29A1,SLC29A1,SLC29A1,SLC29A1	118,38210,118,4172,4172,4239
chr14:31679319-31679826	chr14	+	31679575	31679681	True	NM_015382,NM_001128126	chr14,chr14	-,+	HECTD1,AP4S1	-2886,-184943
chrY:25375496-25376616	chrY	+	25375746	25376652	True	NM_020420,NM_020363	chrY,chrY	-,+	DAZ4,DAZ2	-30492,-10194
chrY:25375496-25376616	chrY	-	25312494	25313305	False	NM_020364,NM_004081	chrY,chrY	+,-	DAZ3,DAZ1	52275,31994
chrY:25375496-25376616	chrY	-	26948566	26949376	False	NM_020364,NM_001005375	chrY,chrY	-,+	DAZ3,DAZ4	10323,30590
chrY:25375496-25376616	chrY	+	27001227	27001887	False	NM_020420,NM_001005786	chrY,chrY	-,+	DAZ4,DAZ2	-41588,-21293
chr7:107302400-107304219	chr7	+	107302633	107303992	True	NM_000441,NR_028137	chr7,chr7	+,-	SLC26A4,LOC286002	-1604,-390
chr3:139395471-139395954	chr3	+	139395533	139395948	True	NM_001200047,NM_178177,NM_022131	chr3,chr3,chr3	-,-,+	NMNAT3,NMNAT3,CLSTN2	988,988,258078
chr10:102287667-102289085	chr10	+	102288254	102288862	True	NM_017902,NM_015490,NM_005004	chr10,chr10,chr10	+,-,-	HIF1AN,SEC31B,NDUFB8	6778,-8659,824
chr10:97786802-97787575	chr10	+	97786948	97787076	True	NM_001134375,NR_036113	chr10,chr10	+,-	CCNJ,MIR3157	16082,37138
chr11:60210560-60212233	chr11	+	60210932	60212263	True	NM_021950,NM_022349	chr11,chr11	+,-	MS4A1,MS4A6A	11018,-260258
chr15:42300418-42302340	chr15	+	42300554	42302252	True	NM_001080490,NM_001114633	chr15,chr15	-,+	PLA2G4E,PLA2G4B	243,-169594
chr20:52824104-52824370	chr20	+	52824151	52824295	True	NM_001128915,NM_002623	chr20,chr20	-,+	CYP24A1,PFDN4	-33635,206
chr19:12265895-12266823	chr19	+	12266180	12266570	True	NM_003437,NR_037801,NR_037802,NM_145233	chr19,chr19,chr19,chr19	+,-,-,-	ZNF136,ZNF625,ZNF625-ZNF20,ZNF625	7301,1028,1028,1028
chr10:21189869-21190698	chr10	+	21190095	21190728	True	NM_006393,NM_001195627	chr10,chr10	-,+	NEBL,MLLT10	-3564,632372
chr12:9598703-9599816	chr12	+	9598922	9599715	True	NR_033399,NR_024374	chr12,chr12	-,+	DDX12,LOC642846	1104,-162727
chr12:9598703-9599816	chr12	-	9437354	9438147	False	NR_036263,NR_024374	chr12,chr12	-,+	MIR1244-3,LOC642846	-45207,-1153
chr12:9598703-9599816	chr12	-	31228120	31228586	False	NM_004399,NM_001135811,NM_030653,NM_152438	chr12,chr12,chr12,chr12	+,-,+,+	DDX11,FAM60A,DDX11,DDX11	-1401,250585,-1401,-1401
chr15:31745892-31746280	chr15	+	31745898	31746230	True	NM_015995,NM_130901	chr15,chr15	+,-	KLF13,OTUD7A	-126866,201362
chr4:24975559-24975809	chr4	+	24975590	24975782	True	NM_003102,NM_173463	chr4,chr4	+,-	SOD3,CCDC149	-178556,6094
chr16:4324268-4324567	chr16	+	4324272	4324368	True	NM_032575,NM_003223	chr16,chr16	+,-	GLIS2,TFAP4	57856,-1271
chr19:10426651-10427152	chr19	+	10426670	10427133	True	NM_001031734,NM_001103167,NM_003259	chr19,chr19,chr19	-,-,+	FDX1L,ZGLP1,ICAM5	21,-6437,-26066
chr6:26884276-26886198	chr6	+	26884361	26884822	True	NR_003504,NR_026775	chr6,chr6	-,+	GUSBL1,NCRNA00240	39570,39949
chr5:191026-191278	chr5	+	191241	191317	True	NM_145265,NM_001080478	chr5,chr5	-,+	CCDC127,LRRC14B	27030,308
chr20:62372810-62373070	chr20	+	62372809	62373069	True	NM_020062,NM_003224,NM_017806	chr20,chr20,chr20	+,-,+	SLC2A4RG,ARFRP1,LIME1	-1649,-33454,-4882
chr2:203241801-203242125	chr2	+	203242007	203242159	True	NM_003352,NM_001204	chr2,chr2	-,+	SUMO1,BMPR2	-138685,-1008
chr21:37758110-37758537	chr21	+	37758163	37758487	True	NM_012130,NM_005441	chr21,chr21	-,+	CLDN14,CHAF1B	80288,-525
chr8:6690879-6691857	chr8	+	6690914	6691746	True	NM_207411,NM_018361	chr8,chr8	-,+	XKR5,AGPAT5	1470,-125087
chr3:179064998-179065436	chr3	+	179065259	179065459	True	NM_033540,NM_171828	chr3,chr3	+,-	MFN1,KCNMB3	20,-80421
chr7:97734392-97736062	chr7	+	97734679	97735863	True	NM_006188,NM_014916	chr7,chr7	-,+	OCM2,LMTK2	-115263,333
chr19:58951772-58952079	chr19	+	58951798	58952120	True	NM_207395,NM_003433	chr19,chr19	+,-	ZNF324B,ZNF132	10850,-209
chr16:47146409-47147661	chr16	+	47146668	47147334	True	NM_001142466,NM_001201477	chr16,chr16	+,-	GPT2,NETO2	-227625,30652
chr17:7533390-7533748	chr17	+	7533397	7533769	True	NM_001040,NM_133491,NM_001146279,NM_001146280,NM_001146281,NR_027462	chr17,chr17,chr17,chr17,chr17,chr17	+,-,+,+,+,+	SHBG,SAT2,SHBG,SHBG,SHBG,SHBG	5,-2203,5,5,5,-2161
chr17:45918753-45920024	chr17	+	45918922	45920032	True	NM_001145023,NM_138355,NM_033413	chr17,chr17,chr17	-,-,+	SCRN2,SCRN2,LRRC46	-223,-223,-9980
chr17:6559362-6559756	chr17	+	6559368	6559794	True	NM_016060,NM_001105520	chr17,chr17	-,+	MED31,C17orf100	-4414,-4360
chr17:6559362-6559756	chr17	-	4543663	4544089	False	NM_001140,NM_001114974	chr17,chr17	-,+	ALOX15,SMTNL2	921,-55880
chr14:103782229-103782550	chr14	+	103782253	103782565	True	NR_033938,NM_001969	chr14,chr14	-,+	LOC100131366,EIF5	-126888,17927
chr1:10536841-10538766	chr1	+	10536893	10538524	True	NM_213566,NM_004565,NM_004401	chr1,chr1,chr1	-,+,-	DFFA,PEX14,DFFA	-4280,-1946,-4280
chr17:11927183-11927466	chr17	+	11927218	11927475	True	NM_144680,NM_003010	chr17,chr17	-,+	ZNF18,MAP2K4	-26529,-3150
chr1:84870335-84872062	chr1	+	84870447	84872102	True	NM_058248,NM_021233,NR_003927	chr1,chr1,chr1	+,+,-	DNASE2B,DNASE2B,UOX	1931,-6283,-6871
chr8:82395567-82397331	chr8	+	82395613	82396718	True	NM_001444,NM_001442	chr8,chr8	+,-	FABP5,FABP4	-202952,-140
chr2:232570870-232571243	chr2	+	232570907	232571233	True	NM_001099285,NR_036052,NR_036263,NR_036262,NM_002823,NM_002601	chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,+,-	PTMA,MIR1244-1,MIR1244-3,MIR1244-2,PTMA,PDE6D	2001,6790,6790,6790,2001,74791
chr14:74484739-74485329	chr14	+	74484994	74485270	True	NM_001249,NM_025057	chr14,chr14	-,+	ENTPD5,C14orf45	806,788
chr17:21189506-21189766	chr17	+	21189506	21189800	True	NM_152914,NM_145109,NM_002756	chr17,chr17,chr17	-,+,+	C17orf103,MAP2K3,MAP2K3	-32928,-1589,1547
chr8:41434101-41434488	chr8	+	41434110	41434329	True	NM_152568,NM_178819	chr8,chr8	-,+	NKX6-3,AGPAT6	70604,1377
chrX:13670095-13670403	chrX	+	13670311	13670375	True	NM_001011658,NM_152634	chrX,chrX	-,+	TRAPPC2,TCEANC	82433,931
chr8:145744054-145745096	chr8	+	145744116	145744860	True	NM_001001795,NM_138431,NM_001024678,NM_014665,NM_004260	chr8,chr8,chr8,chr8,chr8	-,+,-,+,-	C8orf82,MFSD3,LRRC24,LRRC14,RECQL4	9648,-9616,7606,-805,-906
chrX:138774043-138774320	chrX	+	138774095	138774215	True	NM_001099855,NM_000133	chrX,chrX	-,+	MCF2,F9	16216,-161251
chr10:71909122-71910886	chr10	+	71909150	71910921	True	NM_018649,NM_001040273,NM_173555	chr10,chr10,chr10	+,-,-	H2AFY2,TYSND1,TYSND1	-96848,-2654,-2654
chr3:50716399-50717856	chr3	+	50716877	50717548	True	NM_145071,NM_004947	chr3,chr3	-,+	CISH,DOCK3	-67615,-4257
chr12:10282800-10284355	chr12	+	10283130	10284124	True	NM_197949,NM_197948,NM_153022,NM_197954,NM_022570,NM_197950,NM_197947	chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,-,+,-,-,-,-	CLEC7A,CLEC7A,C12orf59,CLEC7A,CLEC7A,CLEC7A,CLEC7A	-262,-262,47432,-262,-262,-262,-262
chr16:733194-733640	chr16	+	733242	733622	True	NM_032259,NM_005861,NM_003961,NM_001005920	chr16,chr16,chr16,chr16	-,+,+,-	WDR24,STUB1,RHBDL1,JMJD8	6828,-3178,-7218,867
chrX:153284157-153284633	chrX	+	153284351	153284651	True	NR_031757,NM_001569,NR_036174,NM_001025242,NM_001025243	chrX,chrX,chrX,chrX,chrX	-,-,+,-,-	MIR718,IRAK1,MIR3202-1,IRAK1,IRAK1	839,741,-37854,741,741
chr9:139635922-139636414	chr9	+	139635952	139636376	True	NM_198946,NR_033913,NM_001001712	chr9,chr9,chr9	-,+,-	LCN6,LOC100128593,LCN10	6654,4236,1085
chrX:37706829-37707879	chrX	+	37706926	37707612	True	NM_000397,NM_006520	chrX,chrX	+,-	CYBB,DYNLT3	-67707,-37
chr20:42984097-42984318	chr20	+	42984165	42984355	True	NM_001080472,NM_001030003,NM_001030004,NM_175914	chr20,chr20,chr20,chr20	-,+,+,+	FITM2,HNF4A,HNF4A,HNF4A	-44276,85,85,85
chr22:19706388-19706691	chr22	+	19706500	19706668	True	NM_024627,NM_001009939,NM_002688,NR_037611,NR_037612,NM_000407	chr22,chr22,chr22,chr22,chr22,chr22	-,+,+,+,+,+	C22orf29,SEPT5,SEPT5,SEPT5-GP1BB,SEPT5-GP1BB,GP1BB	135753,-593,-4564,-1808,-559,4397
chr3:138666730-138667915	chr3	+	138666853	138667686	True	NM_001040061,NM_023067	chr3,chr3	+,-	C3orf72,FOXL2	-837,-871
chr14:52119485-52119951	chr14	+	52119499	52119945	True	NR_037676,NM_152330	chr14,chr14	-,+	C14orf82,FRMD6	-1037,-974
chrX:153708435-153708722	chrX	+	153708538	153708635	True	NM_014235,NM_017514,NM_006014	chrX,chrX,chrX	-,+,-	UBL4A,PLXNA3,LAGE3	6354,-21979,-942
chr3:150808386-150808949	chr3	+	150808409	150808917	True	NM_053002,NM_013308	chr3,chr3	+,-	MED12L,GPR171	-3791,112127
chr19:55087308-55088273	chr19	+	55087424	55088168	True	NM_001130917,NM_006866,NM_145057	chr19,chr19,chr19	+,+,-	LILRA2,LILRA2,CDC42EP5	-2218,-2218,-103002
chr19:42756871-42757359	chr19	+	42756976	42757355	True	NM_006494,NM_015125	chr19,chr19	-,+	ERF,CIC	2004,31461
chr10:98035513-98035793	chr10	+	98035563	98035833	True	NM_001017520,NM_001114094,NM_013314	chr10,chr10,chr10	+,-,-	DNTT,BLNK,BLNK	28251,-4230,-4230
chr19:47165140-47165921	chr19	+	47165183	47165882	True	NM_005184,NM_145056	chr19,chr19	+,-	CALM3,DACT3	-60724,-788
chr22:50702107-50702355	chr22	+	50702259	50702389	True	NM_031454,NM_002969,NM_002751	chr22,chr22,chr22	+,-,-	SELO,MAPK12,MAPK11	-62902,-2170,6440
chr5:110074968-110075170	chr5	+	110074978	110075219	True	NM_001039763,NM_138773	chr5,chr5	-,+	TMEM232,SLC25A46	-12528,-275
chr6:33267637-33268158	chr6_qbl_hap6	+	4499944	4500408	False	NR_028387,NM_001185181,NM_004761	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	-,+,-	RGL2,PFDN6,RGL2	-528,-10340,-528
chr6:33267637-33268158	chr6_mcf_hap5	+	4741448	4741912	False	NR_028387,NM_001185181,NM_004761	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	-,+,-	RGL2,PFDN6,RGL2	-528,-10343,-528
chr6:33267637-33268158	chr6_cox_hap2	+	4711518	4711982	False	NR_028387,NM_001185181,NM_004761	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	-,+,-	RGL2,PFDN6,RGL2	-528,-10343,-528
chr6:33267637-33268158	chr6	+	33267704	33268168	True	NR_028387,NM_001185181,NM_004761	chr6,chr6,chr6	-,+,-	RGL2,PFDN6,RGL2	-528,-10343,-528
chr6:33267637-33268158	chr6_dbb_hap3	+	4549030	4549494	False	NR_028387,NM_001185181,NM_004761	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	-,+,-	RGL2,PFDN6,RGL2	-528,-10343,-528
chr14:77917011-77917966	chr14	+	77917238	77917788	True	NM_012111,NM_022067,NM_001193314,NM_001193315,NM_001193316,NM_001193317	chr14,chr14,chr14,chr14,chr14,chr14	+,-,-,-,-,-	AHSA1,VIPAR,VIPAR,VIPAR,VIPAR,VIPAR	6584,6245,6245,6245,6245,6245
chr16:68576159-68577363	chr16	+	68576171	68577401	True	NM_133458,NM_018667	chr16,chr16	+,-	ZFP90,SMPD3	-2568,-93762
chr14:35403874-35404938	chr14	+	35404003	35404964	True	NR_002937,NM_182648	chr14,chr14	+,-	C14orf19,BAZ1A	4163,-59150
chr6:25280511-25281483	chr6	+	25280655	25281233	True	NM_017640,NM_001173977,NR_027626	chr6,chr6,chr6	+,+,-	LRRC16A,LRRC16A,CMAH	-1050,-1050,-142035
chr3:196229873-196230242	chr3	+	196229891	196230209	True	NM_001105573,NM_152617	chr3,chr3	+,-	FBXO45,RNF168	65515,480
chr3:8547543-8549308	chr3	+	8547547	8549335	True	NM_014583,NR_033378	chr3,chr3	+,-	LMCD1,LOC100288428	-4087,-4203
chrX:117638266-117639146	chrX	+	117638322	117638857	True	NM_001168301,NM_144658	chrX,chrX	-,+	KLHL13,DOCK11	-387019,-8503
chr9:134360376-134361316	chr9	+	134360609	134361317	True	NR_003050,NR_002914,NM_001135954	chr9,chr9,chr9	+,+,-	SNORD62B,SNORD62A,UCK1	-30,-30,45395
chr17:26695964-26696842	chr17	+	26696003	26696861	True	NM_001080837,NM_000638,NM_015077	chr17,chr17,chr17	-,-,+	SEBOX,VTN,SARM1	-3738,562,2125
chr1:233747835-233749579	chr1	+	233747876	233749273	True	NM_002245,NM_014801	chr1,chr1	+,-	KCNK1,PCNXL2	476,-316417
chr3:27675706-27675935	chr3	+	27675727	27675940	True	NM_005442,NM_182523	chr3,chr3	-,+	EOMES,CMC1	87896,607183
chr15:79604897-79606199	chr15	+	79604928	79606214	True	NM_002891,NM_007364	chr15,chr15	-,+	RASGRF1,TMED3	-221713,-1488
chr2:61372301-61372649	chr2	+	61372320	61372474	True	NR_036496,NM_001143960	chr2,chr2	-,+	LOC339803,C2orf74	-210,-132
chr10:75533464-75534157	chr10	+	75533529	75534037	True	NM_003635,NM_203298,NM_173540	chr10,chr10,chr10	-,+,+	NDST2,CHCHD1,FUT11	37602,7770,-1531
chr10:126717206-126717631	chr10	+	126717229	126717675	True	NM_022802,NM_017580,NR_036178	chr10,chr10,chr10	-,+,-	CTBP2,ZRANB1,MIR4296	-776,-86588,3820
chr18:11750039-11750510	chr18	+	11750048	11750466	True	NM_023075,NM_001142339,NM_002071	chr18,chr18,chr18	-,+,+	MPPE1,GNAL,GNAL	158225,1095,1095
chrX:135233726-135234647	chrX	+	135234005	135234554	True	NM_001173517,NM_001159700,NR_027621,NM_001449,NM_001159703,NM_001159702	chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,+	MAP7D3,FHL1,FHL1,FHL1,FHL1,FHL1	99234,-3319,-5195,-4497,-4497,-4497
chr7:43149547-43150955	chr7	+	43149547	43150975	True	NM_015052,NM_002787	chr7,chr7	+,-	HECW1,PSMA2	1222,-177742
chr5:174152190-174152400	chr5	+	174152199	174152387	True	NM_002449,NM_000794	chr5,chr5	+,-	MSX2,DRD1	-675,718826
chr9:131184769-131186557	chr9	+	131184874	131186460	True	NR_029837,NM_016174	chr9,chr9	-,+	MIR219-2,CERCAM	-29881,-2167
chr9:113312141-113312987	chr9	+	113312209	113313037	True	NM_001166280,NM_153366	chr9,chr9	+,-	MUSK,SVEP1	118013,29179
chr12:10463018-10464102	chr12	+	10463058	10464135	True	NM_001114396,NM_007334,NM_007360,NM_002262	chr12,chr12,chr12,chr12	+,+,-,+	KLRD1,KLRD1,KLRK1,KLRD1	-6072,-2705,78569,-2705
chr2:176048107-176048623	chr2	+	176048394	176048668	True	NM_024583,NM_001689,NM_001002258,NM_001190329	chr2,chr2,chr2,chr2	+,-,-,-	SCRN3,ATP5G3,ATP5G3,ATP5G3	-787988,-1904,-2003,-1904
chr10:103108371-103109088	chr10	+	103108681	103109003	True	NM_006562,NM_003939,NM_033637	chr10,chr10,chr10	-,+,+	LBX1,BTRC,BTRC	-119964,4821,4821
chr2:95526537-95527079	chr2	+	95526589	95526943	True	NR_003366,NM_144705	chr2,chr2	-,+	ANKRD20A8P,TEKT4	-3769,10288
chr5:72974872-72975139	chr5	+	72974981	72975120	True	NM_001177693,NM_023039	chr5,chr5	+,-	RGNEF,ANKRA2	-53058,-113470
chr12:119616625-119616854	chr12	+	119616630	119616816	True	NR_024246,NM_014365	chr12,chr12	-,+	LOC144742,HSPB8	124419,-86
chr11:101453669-101454053	chr11	+	101453697	101453867	True	NM_020802,NM_004621	chr11,chr11	+,-	KIAA1377,TRPC6	331878,842
chr2:176986717-176987071	chr2	+	176986809	176986965	True	NM_002148,NM_019558,NM_014213,NM_001080458,NM_001199747,NM_001199746	chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,-,+,+	HOXD10,HOXD8,HOXD9,EVX2,HOXD8,HOXD8	-5368,7502,447,-38119,7456,7502
chr11:74662182-74662575	chr11	+	74662195	74662577	True	NM_014752,NM_182969	chr11,chr11	+,-	SPCS2,XRRA1	-1968,-1963
chr16:66462995-66463804	chr16	+	66463025	66463839	True	NM_001172643,NM_001136106,NM_001197224,NM_001178020,NM_001197225	chr16,chr16,chr16,chr16,chr16	-,+,+,+,+	TK2,BEAN1,BEAN1,BEAN1,BEAN1	120405,-2260,-2260,-2260,-2260
chr6:150469730-150470122	chr6	+	150469738	150469944	True	NM_030949,NM_024518	chr6,chr6	+,-	PPP1R14C,ULBP3	-5602,-79536
chr19:49945627-49946085	chr19	+	49945726	49945874	True	NM_020309,NM_001145396,NM_017916	chr19,chr19,chr19	-,+,-	SLC17A7,ALDH16A1,PIH1D1	-918,10598,9291
chr18:56942908-56943526	chr18	+	56943006	56943518	True	NM_013435,NM_002091	chr18,chr18	-,+	RAX,GRP	-2381,-55657
chr15:77113991-77115606	chr15	+	77114417	77115329	True	NM_002902,NM_001145923	chr15,chr15	+,-	RCN2,SCAPER	108632,39017
chr7:70597435-70597685	chr7	+	70597434	70597658	True	NM_022479,NR_037477	chr7,chr7	+,-	WBSCR17,MIR3914-1	130,175148
chr20:3182893-3183952	chr20	+	3182918	3183598	True	NM_033453,NM_181493,NM_023935	chr20,chr20,chr20	+,+,-	ITPA,ITPA,DDRGK1	6457,6457,1747
chr5:43607712-43608191	chr5	+	43607864	43608020	True	NM_182977,NM_012343,NM_183323	chr5,chr5,chr5	+,+,-	NNT,NNT,PAIP1	-4687,-5125,-50343
chr5:82997871-82998123	chr5	+	82997914	82998030	True	NM_001884,NM_004385	chr5,chr5	-,+	HAPLN1,VCAN	18928,-230472
chr12:50557519-50558922	chr12	+	50558249	50558915	True	NM_032901,NM_147190	chr12,chr12	+,-	C12orf62,LASS5	-52408,2238
chr9:19104880-19105809	chr9	+	19104979	19105628	True	NM_006570,NM_017645	chr9,chr9	+,-	RRAGA,HAUS6	-55658,-2077
chr8:26324878-26326228	chr8	+	26325224	26326254	True	NM_001197293,NM_007257	chr8,chr8	+,-	DPYSL2,PNMA2	45454,45279
chr22:45608871-45609366	chr22	+	45608899	45609307	True	NM_015264,NM_153645	chr22,chr22	-,+	KIAA0930,NUP50	-552,-48398
chr21:42521797-42522077	chr21	+	42521796	42522050	True	NR_024100,NR_036167	chr21,chr21	-,+	C21orf130,MIR3197	-1805,17433
chr8:133057154-133057654	chr8	+	133057163	133057655	True	NM_001080399,NM_015137	chr8,chr8	-,+	OC90,EFR3A	14024,-140858
chr1:49231652-49233364	chr1	+	49231964	49233402	True	NM_024603,NM_001135181	chr1,chr1	-,+	BEND5,SLC5A9	9195,-543660
chr16:31160220-31160499	chr16	+	31160368	31160516	True	NM_173502,NM_001170634	chr16,chr16	-,+	PRSS36,FUS	949,30914
chr5:2754149-2754751	chr5	+	2754189	2754538	True	NM_178569,NM_001134222,NM_033267	chr5,chr5,chr5	+,-,-	C5orf38,IRX2,IRX2	-1978,-2420,-2420
chr3:38547165-38547582	chr3	+	38547460	38547539	True	NM_001145464,NM_005107,NR_028389	chr3,chr3,chr3	+,+,-	EXOG,EXOG,LOC100128640	-9763,-9763,-51149
chr16:56623979-56624193	chr16	+	56624013	56624240	True	NM_005954,NM_031885	chr16,chr16	+,-	MT3,BBS2	-797,-70005
chr17:18266982-18267517	chr17	+	18267094	18267522	True	NM_004169,NM_148918,NM_001145127	chr17,chr17,chr17	-,-,+	SHMT1,SHMT1,EVPLL	-238,-238,13556
chr1:197257151-197258180	chr1	+	197257175	197258213	True	NM_201253,NM_194314	chr1,chr1	+,-	CRB1,ZBTB41	-19893,-87503
chr17:15605720-15607711	chr17	+	15605870	15607010	True	NM_006470,NM_001130842,NM_020652	chr17,chr17,chr17	-,+,+	TRIM16,ZNF286A,ZNF286A	-19677,-3030,-3030
chr17:15605720-15607711	chr17	-	18582316	18582739	False	NM_001145045,NM_001037330,NR_026718	chr17,chr17,chr17	-,+,-	ZNF286B,TRIM16L,FOXO3B	2883,42662,-5822
chr7:98999774-99000360	chr7	+	98999867	99000009	True	NM_003910,NM_014891	chr7,chr7	+,-	BUD31,PDAP1	6591,6346
chr1:26392434-26392904	chr1	+	26392614	26392862	True	NM_004455,NM_032588	chr1,chr1	+,-	EXTL1,TRIM63	-44394,1309
chr7:65006766-65007362	chr7	+	65006800	65007382	True	NM_000181,NR_027392	chr7,chr7	-,+	GUSB,INTS4L2	439969,105394
chr7:65006766-65007362	chr7	-	64613899	64614478	False	NR_027393,NM_001007253	chr7,chr7	+,-	INTS4L1,ERV3	-12347,-146775
chr7:65006766-65007362	chr7	-	65125098	65125678	False	NM_000181,NR_027392	chr7,chr7	-,+	GUSB,INTS4L2	321678,-12372
chr10:13338876-13339755	chr10	+	13339070	13339443	True	NM_006214,NM_001037537,NM_182751	chr10,chr10,chr10	-,-,+	PHYH,PHYH,MCM10	2746,2362,-135574
chr13:95130653-95131230	chr13	+	95130795	95131105	True	NM_001922,NM_001129889,NM_180989	chr13,chr13,chr13	-,-,+	DCT,DCT,GPR180	883,883,122998
chr11:57002728-57003292	chr11	+	57002773	57003271	True	NM_001005210,NM_005161,NR_027991	chr11,chr11,chr11	+,-,-	LRRC55,APLNR,APLNR	-53603,1706,1706
chr16:89240194-89240823	chr16	+	89240224	89240828	True	NM_004933,NM_005187	chr16,chr16	+,-	CDH15,CBFA2T3	-2112,-196720
chr11:132807100-132807619	chr11	+	132807194	132807660	True	NM_002545,NM_016522	chr11,chr11	-,+	OPCML,NTM	5427,-1026534
chr5:101631738-101631988	chr5	+	101631866	101631996	True	NM_000919,NM_180991	chr5,chr5	+,-	PAM,SLCO4C1	569530,307
chr16:1349587-1349850	chr16	+	1349600	1349871	True	NM_194261,NM_194260,NM_001001410,NM_003345,NM_194259	chr16,chr16,chr16,chr16,chr16	+,+,-,+,+	UBE2I,UBE2I,C16orf42,UBE2I,UBE2I	9308,9489,52052,9766,9766
chr16:30347370-30348074	chr16	+	30347438	30347968	True	NR_002453,NM_013292	chr16,chr16	-,+	LOC595101,MYLPF	-743,38154
chr1:161411575-161411821	chr1	+	161411596	161411790	True	NM_001136219,NM_001013625	chr1,chr1	+,-	FCGR2A,C1orf192	63414,-73932
chr1:161411575-161411821	chr1	+	161419014	161419208	False	NM_001136219,NM_001013625	chr1,chr1	+,-	FCGR2A,C1orf192	55996,-81350
chr1:161411575-161411821	chr1	+	161426395	161426589	False	NM_001136219,NM_001013625	chr1,chr1	+,-	FCGR2A,C1orf192	48615,-88731
chr1:161411575-161411821	chr1	+	161433805	161433999	False	NM_000569,NM_001136219	chr1,chr1	-,+	FCGR3A,FCGR2A	85869,41205
chr1:161411575-161411821	chr1	+	161441186	161441380	False	NM_000569,NM_001136219	chr1,chr1	-,+	FCGR3A,FCGR2A	78488,33824
chr11:65772225-65772431	chr11	+	65772227	65772453	True	NM_003860,NM_001143985,NM_032325,NM_001323	chr11,chr11,chr11,chr11	+,+,-,+	BANF1,BANF1,EIF1AD,CST6	-2735,-2735,-2649,7008
chr9:125667473-125667693	chr9	+	125667479	125667729	True	NM_012197,NM_018835,NM_001100588,NM_006626	chr9,chr9,chr9,chr9	+,-,-,-	RABGAP1,RC3H2,RC3H2,ZBTB6	35558,-51,-51,7930
chr4:90758401-90758662	chr4	+	90758525	90758611	True	NM_001146055,NM_000345,NM_007351,NM_007308,NM_001146054	chr4,chr4,chr4,chr4,chr4	-,-,+,-,-	SNCA,SNCA,MMRN1,SNCA,SNCA	886,-175,57440,-398,-398
chr3:47516141-47516700	chr3	+	47516303	47516597	True	NM_012235,NM_015466	chr3,chr3	-,+	SCAP,PTPN23	898,-93871
chr6:153300048-153300363	chr6	+	153300187	153300412	True	NM_194435,NM_012177,NM_001142522	chr6,chr6,chr6	+,-,-	VIP,FBXO5,FBXO5	-228318,3848,4385
chr3:122514169-122514421	chr3	+	122514201	122514437	True	NM_024610,NM_032839	chr3,chr3	-,+	HSPBAP1,DIRC2	-1551,-351
chr6:134271424-134272189	chr6	+	134271463	134272240	True	NM_004865,NM_145176	chr6,chr6	+,-	TBPL1,SLC2A12	2060,101608
chr8:82193143-82193660	chr8	+	82193180	82193596	True	NM_001444,NM_002677	chr8,chr8	+,-	FABP5,PMP2	-513,166173
chr5:131564192-131564687	chr5	+	131564321	131564667	True	NM_001017973,NM_001142598,NM_001142599,NM_001017974,NM_001131027,NM_004199	chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,+,-	P4HA2,P4HA2,P4HA2,P4HA2,PDLIM4,P4HA2	-1386,-765,-765,-765,28683,-1386
chr20:57523408-57524204	chr20	+	57523432	57524108	True	NM_001336,NM_198976	chr20,chr20	-,+	CTSZ,TH1L	58251,32202
chr1:65212155-65213408	chr1	+	65212164	65213087	True	NM_002227,NM_018211	chr1,chr1	-,+	JAK1,RAVER2	219158,-1437
chr19:51612421-51612895	chr19	+	51612424	51612870	True	NM_145232,NM_014441	chr19,chr19	-,+	CTU1,SIGLEC9	-777,15266
chr12:8395610-8396160	chr12	+	8396073	8396209	True	NR_024254,NR_026788	chr12,chr12	-,+	LOC653113,FAM66C	-531,-63319
chr19:10445344-10445550	chr19	+	10445413	10445597	True	NM_002162,NM_133452,NM_003259	chr19,chr19,chr19	-,-,+	ICAM3,RAVER1,ICAM5	4798,-1099,-44809
chr6:74102998-74103354	chr6	+	74103087	74103292	True	NM_001080507,NM_018665	chr6,chr6	-,+	OOEP,DDX43	-23572,992
chr17:71818945-71819998	chr17	+	71819368	71819998	True	NM_000999,NR_027146	chr17,chr17	+,-	RPL38,C17orf54	379796,4728
chr13:111839252-111839784	chr13	+	111839269	111839807	True	NM_001113513,NM_017664	chr13,chr13	+,-	ARHGEF7,ANKRD10	-147,-271853
chr19:48825355-48825635	chr19	+	48825419	48825635	True	NM_144577,NM_001425	chr19,chr19	-,+	CCDC114,EMP3	-2087,2993
chr6:105586107-105586544	chr6	+	105586111	105586460	True	NM_007073,NR_037157,NM_001199563,NM_147147	chr6,chr6,chr6,chr6	-,+,-,-	BVES,C6orf112,BVES,BVES	-1568,-601,-1062,-1890
chr3:39145172-39145388	chr3	+	39145179	39145434	True	NM_031899,NM_145755,NM_001105513	chr3,chr3,chr3	-,+,+	GORASP1,TTC21A,TTC21A	3746,3717,3717
chr1:154841978-154842911	chr1	+	154842002	154842848	True	NM_001826,NM_001204087,NM_002249,NM_170782	chr1,chr1,chr1,chr1	+,-,-,-	CKS1B,KCNN3,KCNN3,KCNN3	104269,-22,-22,-9664
chr10:31261191-31262552	chr10	+	31261283	31262433	True	NM_001143769,NM_001174093	chr10,chr10	-,+	ZNF438,ZEB1	26063,345667
chr2:47168889-47169442	chr2	+	47169081	47169419	True	NM_001171508,NM_020458,NM_001171511	chr2,chr2,chr2	-,+,-	MCFD2,TTC7A,MCFD2	-87,-819,-87
chr2:242810930-242811616	chr2	+	242811052	242811636	True	NM_173821,NM_005018	chr2,chr2	+,-	C2orf85,PDCD1	249,-10188
chr10:25016226-25016656	chr10	+	25016346	25016480	True	NM_020824,NM_024838	chr10,chr10	-,+	ARHGAP21,THNSL1	-3749,289027
chr14:29243008-29243208	chr14	+	29243033	29243156	True	NM_002742,NR_026731,NR_026732,NM_005249	chr14,chr14,chr14,chr14	-,+,+,+	PRKD1,C14orf23,C14orf23,FOXG1	1153794,-1181,-1181,-6804
chr20:32699974-32700180	chr20	+	32700000	32700226	True	NM_016732,NM_003908	chr20,chr20	+,-	RALY,EIF2S2	-118319,27
chr14:92327626-92328483	chr14	+	92327662	92328134	True	NM_001128596,NM_017437	chr14,chr14	-,+	TC2N,CPSF2	5796,260163
chr7:117119655-117119920	chr7	+	117119663	117119785	True	NR_023315,NM_000492	chr7,chr7	-,+	ASZ1,CFTR	-52086,231
chr1:226245540-226245961	chr1	+	226245798	226245864	True	NM_152608,NM_002107,NR_002315	chr1,chr1,chr1	-,+,+	C1orf55,H3F3A,LOC440926	-58732,4543,4563
chr7:79081406-79081612	chr7	+	79081506	79081624	True	NR_031667,NM_012301	chr7,chr7	+,-	MIR548M,MAGI2	318947,1316
chr15:59041898-59042187	chr15	+	59042005	59042205	True	NM_001040450,NM_001110	chr15,chr15	+,-	FAM63B,ADAM10	21187,22
chr5:140168633-140168959	chr5	+	140168632	140168721	True	NM_031410,NM_031411,NM_002109,NM_031495,NM_018900,NM_018905	chr5,chr5,chr5,chr5,chr5,chr5	+,+,-,+,+,+	PCDHA1,PCDHA1,HARS,PCDHA2,PCDHA1,PCDHA2	-2810,-2810,-97661,5722,-2810,5722
chr16:2199023-2199248	chr16	+	2199110	2199296	True	NR_002736,NM_014353,NM_032271	chr16,chr16,chr16	-,+,+	SNORD60,RAB26,TRAF7	5860,-510,6502
chr1:35325510-35325711	chr1	+	35325514	35325736	True	NM_001164824,NM_001164825,NM_138428,NM_002060	chr1,chr1,chr1,chr1	-,-,-,+	C1orf212,C1orf212,C1orf212,GJA4	-868,-176,-97,-66966
chr13:72438943-72439269	chr13	+	72438993	72439225	True	NM_004392,NM_080760,NM_024808,NM_080759	chr13,chr13,chr13,chr13	-,-,+,-	DACH1,DACH1,C13orf34,DACH1	2155,2155,862816,2155
chr8:57360849-57361703	chr8	+	57360871	57361557	True	NM_001135690,NM_024300,NM_006211	chr8,chr8,chr8	-,+,-	PENK,CHCHD7,PENK	-1589,-236609,-2278
chr1:206729884-206730127	chr1	+	206729888	206730074	True	NM_182665,NM_001201478	chr1,chr1	+,-	RASSF5,EIF2D	417,55888
chr2:71294908-71295159	chr2	+	71295042	71295144	True	NM_032601,NM_017567	chr2,chr2	-,+	MCEE,NAGK	62300,263
chr11:55753268-55753977	chr11	+	55753432	55753709	True	NM_003697,NM_001001921,NR_027688	chr11,chr11,chr11	-,+,-	OR5F1,OR5AS1,OR7E5P	8455,44185,235
chr14:101349464-101349750	chr14	+	101349616	101349794	True	NR_029965,NR_029966,NR_029699,NR_029696,NR_030173,NR_030617,NR_029889,NM_001134888	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,+,+,+,+,-	MIR431,MIR433,MIR136,MIR127,MIR432,MIR665,MIR337,RTL1	-2323,-1444,1244,-351,1025,-8297,-8837,1440
chr17:17184696-17186331	chr17	+	17184721	17185947	True	NM_003653,NM_001199125,NM_020201	chr17,chr17,chr17	-,-,+	COPS3,COPS3,NT5M	-104,-709,20732
chr17:18013076-18013420	chr17	+	18013083	18013417	True	NM_016239,NM_145691	chr17,chr17	+,-	MYO15A,ATPAF2	-1114,-70603
chrX:46693526-46694536	chrX	+	46693884	46694347	True	NM_032591,NM_006915	chrX,chrX	-,+	SLC9A7,RP2	-75412,1999
chr18:12076787-12077328	chr18	+	12076865	12077166	True	NM_023075,NM_014214	chr18,chr18	-,+	MPPE1,IMPA2	-168224,-95496
chr18:12076787-12077328	chr18	-	10915586	10915643	False	NM_003826,NM_022068	chr18,chr18	+,-	NAPG,FAM38B	-389771,233175
chr21:37836490-37836858	chr21	+	37836629	37836781	True	NM_012130,NM_005441	chr21,chr21	-,+	CLDN14,CHAF1B	1994,-78993
chr21:11169244-11169474	chr22	+	17517638	17517702	False	NM_001037814,NR_015352	chr22,chr22	-,+	GAB4,CECR7	-28526,-229
chr21:11169244-11169474	chr21	+	11169245	11169467	True	NM_001187,NR_037458	chr21,chr21	-,+	BAGE,MIR3687	-70308,-1343093
chr14:24732128-24732615	chr14	+	24732132	24732422	True	NM_000359,NM_004581,NM_016576,NM_182836	chr14,chr14,chr14,chr14	-,-,+,-	TGM1,RABGGTA,GMPR2,RABGGTA	44,8371,-30080,8431
chr12:50673345-50673642	chr12	+	50673357	50673623	True	NM_016357,NM_001170804,NM_001113546	chr12,chr12,chr12	-,+,-	LIMA1,LARP4,LIMA1	3788,120968,3788
chr15:31109598-31110925	chr15	+	31109782	31110556	True	NM_017762,NM_001146095	chr15,chr15	-,+	MTMR10,FAN1	173303,85498
chr3:183754536-183754809	chr3	+	183754544	183754686	True	NM_182537,NM_001023587,NM_001145143,NM_001163646	chr3,chr3,chr3,chr3	+,-,+,+	HTR3D,ABCC5,HTR3D,HTR3D	-5264,-18817,-5066,-3977
chr12:13150557-13152423	chr12	+	13150975	13152371	True	NM_015987,NR_002774	chr12,chr12	-,+	HEBP1,HTR7P1	922,1004
chr19:44561041-44561539	chr19	+	44561330	44561557	True	NR_033341,NM_013361	chr19,chr19	-,+	LOC100379224,ZNF223	55840,-5228
chr9:100461929-100462480	chr9	+	100462120	100462418	True	NM_000380,NR_027302,NM_002486	chr9,chr9,chr9	-,-,+	XPA,XPA,NCBP1	-2429,-2429,-66474
chr8:81212405-81212767	chr8	+	81212412	81212750	True	NM_005079,NM_001105539	chr8,chr8	-,+	TPD52,ZBTB10	-128576,185697
chr6:36562630-36563860	chr6	+	36562720	36563664	True	NM_003017,NR_037491,NR_036610	chr6,chr6,chr6	+,-,+	SRSF3,MIR3925,SRSF3	-687,26684,-687
chr15:40513861-40514273	chr15	+	40513875	40514291	True	NM_001128628,NM_001128629,NM_001039905	chr15,chr15,chr15	+,+,-	PAK6,PAK6,C15orf56	-4305,-4305,30869
chr19:3570725-3571375	chr19	+	3570724	3571072	True	NM_174983,NM_006339	chr19,chr19	-,+	C19orf28,HMG20B	-13153,1870
chr16:105083-106620	chr16	+	105129	106659	True	NM_016310,NM_024571	chr16,chr16	-,+	POLR3K,SNRNP25	-1497,-1351
chr11:195180-195620	chr11	+	195434	195552	True	NM_053280,NM_001097610,NM_145651,NM_001098787	chr11,chr11,chr11,chr11	+,+,+,-	ODF3,LOC653486,SCGB1C1,BET1L	1208,-2405,-2405,11920
chr17:76613432-76614001	chr17	+	76613510	76613932	True	NM_173628,NM_024419	chr17,chr17	-,+	DNAH17,PGS1	-40034,-238827
chr10:73533958-73534188	chr10	+	73534006	73534214	True	NM_022153,NM_001171933	chr10,chr10	-,+	C10orf54,CDH23	-669,21313
chr9:136040258-136040725	chr9	+	136040274	136040764	True	NM_021996,NR_001275	chr9,chr9	-,+	GBGT1,CELP	-973,-82399
chr14:106384912-106385408	chr14	+	106385095	106385391	True	NR_002224,NR_026800	chr14,chr14	-,+	ADAM6,KIAA0125	53017,-1308
chr18:61146286-61148001	chr18	+	61146320	61148018	True	NM_004869,NM_002639	chr18,chr18	-,+	VPS4B,SERPINB5	-56568,-2228
chr9:35654020-35655807	chr9	+	35654365	35655146	True	NM_014450,NM_001195201,NM_001195200,NR_003051,NM_001195217,NM_174923	chr9,chr9,chr9,chr9,chr9,chr9	-,+,+,-,+,+	SIT1,CCDC107,CCDC107,RMRP,CCDC107,CCDC107	-3418,3140,3140,2919,3140,3140
chr11:30037922-30038124	chr11	+	30037966	30038054	True	NM_002233,NM_000510	chr11,chr11	-,+	KCNA4,FSHB	581,214508
chr17:8192524-8193981	chr17	+	8192710	8193962	True	NM_201520,NM_001177802,NM_016492,NM_001177801	chr17,chr17,chr17,chr17	-,+,+,+	SLC25A35,RANGRF,RANGRF,RANGRF	4258,-792,-792,-792
chr11:6495560-6497001	chr11	+	6495586	6496664	True	NM_012192,NM_006458,NM_033278,NM_012402	chr11,chr11,chr11,chr11	+,-,-,-	FXC1,TRIM3,TRIM3,ARFIP2	6012,-381,-381,5981
chr1:46204366-46206070	chr1	+	46204554	46205380	True	NM_001145349,NM_016486	chr1,chr1	-,+	IPP,TMEM69	11166,-50768
chr19:496426-496656	chr19	+	496430	496540	True	NM_130762,NM_182577,NM_130760	chr19,chr19,chr19	+,-,+	MADCAM1,ODF3L2,MADCAM1	1,-21447,1
chr2:163064688-163066296	chr2	+	163064893	163066342	True	NM_004460,NM_012198	chr2,chr2	-,+	FAP,GCA	33763,134240
chr1:201181972-201182215	chr1	+	201181971	201182264	True	NM_001164586,NM_016456	chr1,chr1	+,-	IGFN1,TMEM9	-22069,-58339
chr5:174869712-174870830	chr5	+	174869716	174870672	True	NM_022754,NM_000794	chr5,chr5	+,-	SFXN1,DRD1	34841,549
chr6:51927638-51928526	chr6	+	51927899	51928569	True	NR_029713,NM_138694	chr6,chr6	+,-	MIR206,PKHD1	80577,23904
chr3:63275660-63276619	chr3	+	63275969	63276636	True	NM_001130003,NM_183394	chr3,chr3	+,-	SYNPR,CADPS	-12115,-414905
chr18:77441037-77441966	chr18	+	77441143	77441931	True	NM_001202504,NM_048368,NM_004715,NM_001146343	chr18,chr18,chr18,chr18	+,+,+,-	CTDP1,CTDP1,CTDP1,PQLC1	-127,-1393,-1393,269772
chr20:4619887-4620801	chr20	+	4620126	4620721	True	NR_024267,NM_000311	chr20,chr20	-,+	PRNT,PRNP	100650,46075
chr11:62778207-62779756	chr11	+	62778265	62779155	True	NM_001184736,NR_037193,NM_001184732,NM_001184733,NM_004254	chr11,chr11,chr11,chr11,chr11	-,+,-,-,-	SLC22A8,SLC3A2,SLC22A8,SLC22A8,SLC22A8	4212,-129145,4212,4212,4212
chr20:30949588-30950343	chr20	+	30949922	30950090	True	NM_080616,NM_015338,NM_001164603	chr20,chr20,chr20	-,+,+	C20orf112,ASXL1,ASXL1	121248,-3826,-3826
chr11:69591491-69591787	chr11	+	69591517	69591787	True	NM_002007,NM_053056	chr11,chr11	-,+	FGF4,CCND1	-1346,-135695
chr3:187607068-187607566	chr3	+	187607092	187607527	True	NR_034062,NM_001706	chr3,chr3	+,-	LOC100131635,BCL6	-186990,-143579
chr2:204639836-204640066	chr2	+	204639841	204639991	True	NM_006139,NM_203365	chr2,chr2	+,-	CD28,RAPH1	-68701,-239783
chr7:17375938-17377189	chr7	+	17375972	17376955	True	NM_001621,NM_176813	chr7,chr7	+,-	AHR,AGR3	-37759,-454359
chr15:42787401-42787687	chr15	+	42787421	42787725	True	NM_003825,NM_022473,NM_130798	chr15,chr15,chr15	+,-,+	SNAP23,ZFP106,SNAP23	109,-37691,109
chr8:62206733-62207684	chr8	+	62206746	62207724	True	NR_034003,NM_173519	chr8,chr8	-,+	LOC100130298,CLVS1	-326439,-6272
chr15:89879244-89880045	chr15	+	89879243	89879744	True	NM_001126131,NR_029692,NM_002693	chr15,chr15,chr15	-,+,-	POLG,MIR9-3,POLG	-1217,31503,-1217
chr8:145513324-145513679	chr8	+	145513477	145513615	True	NM_005526,NM_015201	chr8,chr8	+,-	HSF1,BOP1	1654,1555
chr5:172755675-172756235	chr5	+	172755706	172756104	True	NM_013980,NM_003714	chr5,chr5	+,-	BNIP1,STC2	-184312,452
chr7:29879164-29880845	chr7	+	29879170	29880851	True	NM_001080529,NM_001145515	chr7,chr7	+,-	WIPF3,SCRN1	-4880,148625
chr3:193308680-193310384	chr3	+	193308692	193310399	True	NM_032279,NM_015560,NM_130832,NM_130833,NM_130831,NM_130836,NM_130837,NM_130834,NM_130835	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,+,+,+,+,+,+,+	ATP13A4,OPA1,OPA1,OPA1,OPA1,OPA1,OPA1,OPA1,OPA1	-35996,533,533,533,533,533,533,533,533
chr7:133818737-133820106	chr7	+	133818833	133820064	True	NM_032826,NM_144648	chr7,chr7	-,+	SLC35B4,LRGUK	181813,-6779
chr9:136203234-136203657	chr9	+	136203304	136203652	True	NM_000972,NM_006753	chr9,chr9	+,-	RPL7A,SURF6	11416,-257
chr21:40124164-40124563	chr21	+	40124324	40124398	True	NR_027067,NM_005239	chr21,chr21	-,+	NCRNA00114,ETS2	-143,53450
chr3:183817974-183818370	chr3	+	183817989	183818391	True	NM_182589,NM_001023587	chr3,chr3	+,-	HTR3E,ABCC5	-81,-82262
chr4:37467086-37467580	chr4	+	37467157	37467597	True	NM_001104629,NM_001085399	chr4,chr4	+,-	C4orf19,RELL1	-11656,220452
chr17:46124723-46125156	chr17	+	46124743	46125083	True	NM_003204,NM_016429	chr17,chr17	+,-	NFE2L1,COPZ2	602,-9591
chr1:114497324-114498787	chr1	+	114497378	114498304	True	NM_181358,NM_198269,NM_006594	chr1,chr1,chr1	+,+,-	HIPK1,HIPK1,AP4B1	-930,-3662,-49637
chr9:503409-504040	chr9	+	503418	503855	True	NM_152569,NM_015158	chr9,chr9	-,+	C9orf66,KANK1	-287525,847
chr1:33000472-33002110	chr1	+	33000874	33002049	True	NM_178547,NM_001040441	chr1,chr1	-,+	ZBTB8OS,ZBTB8A	114200,2722
chr8:86165265-86166227	chr8	+	86165832	86166117	True	NM_001099673,NM_198584	chr8,chr8	-,+	C8orf59,CA13	-33189,-8169
chrX:135048607-135050107	chrX	+	135048875	135049950	True	NM_173470,NM_001177651	chrX,chrX	-,+	MMGT1,SLC9A6	6247,17632
chr17:40988319-40989056	chr17	+	40988349	40988583	True	NM_176863,NM_001158,NM_009590,NM_005789,NM_003766	chr17,chr17,chr17,chr17,chr17	+,+,+,+,-	PSME3,AOC2,AOC2,PSME3,BECN1	-2977,8025,8025,-2977,-12039
chr1:48445865-48446979	chr1	+	48445937	48446643	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	15969,241713
chrX:39955459-39955934	chrX	+	39955662	39955936	True	NM_005765,NM_001123385,NM_017745	chrX,chrX,chrX	+,-,-	ATP6AP2,BCOR,BCOR	484279,833,833
chr14:75422652-75423708	chr14	+	75422751	75423441	True	NM_014239,NM_002632	chr14,chr14	+,-	EIF2B2,PGF	46170,-460
chr12:128079498-128080913	chr12	+	128079769	128080271	True	NR_033970,NR_033987	chr12,chr12	-,+	LOC440117,FLJ37505	-720533,285890
chr7:75366957-75367561	chr7	+	75366956	75367427	True	NM_001040456,NM_005338	chr7,chr7	+,-	RHBDD2,HIP1	140889,902
chr17:4691814-4692438	chr17	+	4691814	4692484	True	NM_002798,NM_001014985,NM_001144939,NM_001144941,NM_001144940,NM_182566	chr17,chr17,chr17,chr17,chr17,chr17	+,+,-,-,-,-	PSMB6,GLTPD2,VMO1,VMO1,VMO1,VMO1	6972,19,-2085,-2085,-2085,-2085
chr12:109028838-109029092	chr12	+	109028995	109029115	True	NM_003006,NM_213595	chr12,chr12	-,+	SELPLG,ISCU	-1325,-72752
chr7:44199010-44200096	chr7	+	44199239	44200049	True	NM_006555,NM_033507,NM_033508	chr7,chr7,chr7	+,-,-	YKT6,GCK,GCK	40528,-352,-352
chr14:20972701-20973681	chr10	+	135144174	135144729	False	NM_001145201,NM_015722	chr10,chr10	+,-	PRAP1,CALY	16114,5898
chr14:20972701-20973681	chr14	+	20972862	20973238	True	NM_144568,NM_001012975	chr14,chr14	-,+	TMEM55B,RNASE10	-43225,5392
chr9:12776467-12778269	chr9	+	12776772	12778238	True	NM_203403,NM_003829	chr9,chr9	+,-	C9orf150,MPDZ	-1819,472177
chr10:120631731-120632089	chr10	+	120631889	120632037	True	NM_199461,NM_153810	chr10,chr10	+,-	NANOS1,C10orf46	157190,-117131
chr15:67458035-67458893	chr15	+	67458262	67458924	True	NM_001145104,NM_024666	chr15,chr15	+,-	SMAD3,AAGAB	-54,88200
chr17:46607868-46608081	chr17	+	46607918	46608114	True	NM_002144,NR_033201	chr17,chr17	-,+	HOXB1,LOC404266	208,59708
chr22:17963764-17964519	chr22	+	17963929	17964524	True	NM_001039366,NM_031413	chr22,chr22	-,+	ATP6V1E1,CECR2	147115,-7352
chr10:72973345-72973590	chr10	+	72973532	72973594	True	NM_000281,NM_170744	chr10,chr10	-,+	PCBD1,UNC5B	-324991,-1285
chr10:69263003-69264065	chr10	+	69263328	69263645	True	NM_001127384,NM_012238	chr10,chr10	-,+	CTNNA3,SIRT1	161823,380781
chr19:16607353-16607658	chr19	+	16607519	16607635	True	NM_145046,NM_032207	chr19,chr19	-,+	CALR3,C19orf44	-516,-373
chr15:45004265-45005054	chr15	+	45004309	45004909	True	NM_004048,NM_001145112	chr15,chr15	+,-	B2M,PATL2	-675,-35223
chr16:46722276-46722640	chr16	+	46722284	46722548	True	NM_014321,NR_037620,NM_018206	chr16,chr16,chr16	+,+,-	ORC6,ORC6,VPS35	1009,1009,646
chr2:241078750-241079551	chr2	+	241078841	241079491	True	NM_001163424,NM_148961,NM_138336,NM_002081	chr2,chr2,chr2,chr2	-,-,-,+	MYEOV2,OTOS,MYEOV2,GPC1	-3094,634,-3077,295623
chrX:54070946-54071151	chrX	+	54070982	54071114	True	NM_001184897,NM_001184896,NM_015107,NM_058163,NM_001184898	chrX,chrX,chrX,chrX,chrX	-,-,-,+,-	PHF8,PHF8,PHF8,TSR2,PHF8	-375,505,-375,395738,-1355
chr1:151693602-151693836	chr1	+	151693614	151693831	True	NM_001144956,NM_001172649,NM_007185,NM_001172648	chr1,chr1,chr1,chr1	+,-,-,-	RIIAD1,CELF3,CELF3,CELF3	181,-4732,-4324,-4822
chrX:47077976-47078229	chrX	+	47078022	47078244	True	NM_006201,NR_024235,NM_033018,NM_001170460	chrX,chrX,chrX,chrX	+,-,+,+	CDK16,NDUFB11,CDK16,CDK16	3,-73413,-545,4172
chr1:54665959-54667833	chr1	+	54666189	54667635	True	NM_001031672,NM_016491	chr1,chr1	-,+	CYB5RL,MRPL37	-443,-400
chr17:79869267-79869640	chr17	+	79869296	79869378	True	NM_016538,NM_002861,NM_148896,NM_001184917,NR_033682,NR_033683,NR_033681,NR_033685	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,-,-,-,-,-	SIRT7,PCYT2,NPB,PCYT2,PCYT2,PCYT2,PCYT2,PCYT2	6730,12,-9275,12,12,-219,12,-219
chr5:162930236-162930608	chr5	+	162930254	162930642	True	NM_182796,NM_145266,NM_013283	chr5,chr5,chr5	+,-,+	MAT2B,NUDCD2,MAT2B	-74,-43111,1942
chr13:37249234-37251171	chr13	+	37249370	37251127	True	NM_001127217,NM_203451	chr13,chr13	-,+	SMAD9,C13orf36	243333,-1372
chr16:56649968-56650660	chr16	+	56650327	56650686	True	NR_001447,NM_175617,NM_005953,NM_005950	chr16,chr16,chr16,chr16	+,+,+,-	MT1L,MT1E,MT2A,MT1G	686,8898,-7911,51341
chr11:13982548-13983782	chr11	+	13982548	13983730	True	NM_006108,NM_001177315	chr11,chr11	+,-	SPON1,RRAS2	183,396351
chr12:120638847-120639188	chr12	+	120638863	120639089	True	NM_053275,NM_012240,NM_006836,NM_001002	chr12,chr12,chr12,chr12	-,+,-,-	RPLP0,SIRT4,GCN1L1,RPLP0	3,101034,-6350,3
chr14:60182774-60184125	chr14	+	60182884	60184166	True	NM_016475,NM_206857	chr14,chr14	+,-	JKAMP,RTN1	-231781,10315
chr17:76621985-76622577	chr17	+	76622098	76622272	True	NM_173628,NM_024419	chr17,chr17	-,+	DNAH17,PGS1	-48622,-247414
chr20:23346731-23348176	chr20	+	23347235	23348194	True	NM_022482,NM_022080	chr20,chr20	+,-	GZF1,NAPB	-2278,54012
chr10:115411211-115412080	chr10	+	115411626	115412120	True	NM_006175,NM_033340	chr10,chr10	-,+	NRAP,CASP7	11735,26814
chr5:176771829-176773062	chr5	+	176771958	176773110	True	NM_006816,NM_006480	chr5,chr5	-,+	LMAN2,RGS14	5825,11733
chr2:237078272-237078507	chr2	+	237078286	237078462	True	NM_020311,NM_001485	chr2,chr2	+,-	CXCR7,GBX2	399917,-1634
chr12:95468461-95470351	chr12	+	95468580	95470221	True	NM_001127362,NM_017599,NM_001032287,NM_003297	chr12,chr12,chr12,chr12	-,+,-,-	NR2C1,VEZT,NR2C1,NR2C1	-1176,141300,-1176,-1176
chr20:48744747-48744976	chr20	+	48744901	48744977	True	NM_005194,NM_199144	chr20,chr20	+,-	CEBPB,UBE2V1	62398,-12407
chr17:56494600-56495281	chr17	+	56494818	56495252	True	NM_017763,NR_027647	chr17,chr17	-,+	RNF43,LPO	-105,-179082
chr4:107242827-107244023	chr4	+	107243493	107243860	True	NM_004757,NM_001142415,NM_001142416,NM_033115,NM_001163436,NM_001163437,NM_001163435	chr4,chr4,chr4,chr4,chr4,chr4,chr4	+,+,+,-,-,-,-	AIMP1,AIMP1,AIMP1,TBCK,TBCK,TBCK,TBCK	-6698,-6784,-5887,-6070,-5632,-6070,-6070
chr15:42752912-42754651	chr15	+	42753237	42754439	True	NM_022473,NM_003825	chr15,chr15	-,+	ZFP106,SNAP23	-3507,33395
chr22:24180062-24180278	chr22	+	24180137	24180319	True	NM_198440,NM_001002862,NM_001024938,NM_001135751	chr22,chr22,chr22,chr22	-,-,+,-	DERL3,DERL3,SLC2A11,DERL3	930,930,18739,930
chr19:36066654-36068317	chr19	+	36066759	36068117	True	NM_000704,NM_032635	chr19,chr19	-,+	ATP4A,TMEM147	-12199,-30265
chr12:109826893-109828561	chr12	+	109826895	109828433	True	NM_213596,NM_001101421	chr12,chr12	-,+	FOXN4,MYO1H	-79870,-422
chr6:142682546-142683499	chr6	+	142682773	142683452	True	NM_002511,NM_198569	chr6,chr6	-,+	NMBR,GPR126	-272837,-59768
chr7:138601705-138602023	chr7	+	138601811	138602044	True	NM_001164665,NM_001085429	chr7,chr7	-,+	KIAA1549,TMEM213	64071,-119123
chr2:43034089-43035044	chr2	+	43034098	43035072	True	NM_020744,NM_012205	chr2,chr2	+,-	MTA3,HAAO	-238478,-14347
chr17:38973148-38975071	chr17	+	38973228	38974711	True	NM_145274,NM_000421,NM_001195387,NM_001195386	chr17,chr17,chr17,chr17	+,-,+,+	TMEM99,KRT10,TMEM99,TMEM99	662,4202,632,725
chr14:93650513-93650935	chr14	+	93650558	93650932	True	NM_022151,NM_001098621,NM_015676	chr14,chr14,chr14	-,+,+	MOAP1,C14orf109,C14orf109	367,442,363
chr2:182321280-182321539	chr2	+	182321384	182321470	True	NM_001030311,NM_000885	chr2,chr2	-,+	CERKL,ITGA4	200414,148
chr5:76010933-76011139	chr5	+	76011051	76011117	True	NR_028375,NM_001992,NM_004101	chr5,chr5,chr5	+,+,-	NCRUPAR,F2R,F2RL2	-3342,750,-91811
chr3:10155670-10156116	chr3	+	10155750	10155920	True	NM_173472,NM_018462,NM_001164839	chr3,chr3,chr3	-,+,-	C3orf24,C3orf10,C3orf24	-5835,1412,-5835
chr19:1480047-1481257	chr19	+	1480047	1481235	True	NM_138393,NM_152482,NM_017573	chr19,chr19,chr19	+,-,-	REEP6,C19orf25,PCSK4	9929,-819,9222
chr17:17140694-17141227	chr17	+	17140808	17141012	True	NM_144997,NM_020201,NM_144606	chr17,chr17,chr17	-,+,-	FLCN,NT5M,FLCN	-306,65667,-306
chr3:49399543-49400571	chr3	+	49399630	49400439	True	NM_201397,NM_022171,NM_000581	chr3,chr3,chr3	-,+,-	GPX1,TCTA,GPX1	-3839,49199,-3839
chr2:170655890-170656760	chr2	+	170655930	170656573	True	NM_003142,NM_014168	chr2,chr2	+,-	SSB,METTL5	-592,24841
chr14:73360887-73361129	chr14	+	73360937	73361144	True	NM_012074,NM_001163508	chr14,chr14	-,+	DPF3,DCAF4	-128,31895
chr3:46716585-46717850	chr3	+	46716659	46717647	True	NM_182775,NM_147196	chr3,chr3	-,+	ALS2CL,TMIE	1302,25175
chr8:67583917-67584786	chr8	+	67583942	67584660	True	NM_019607,NM_001204173,NM_025054	chr8,chr8,chr8	+,+,-	C8orf44,C8orf44-SGK3,VCPIP1	-4206,-4206,-4490
chr6:133130142-133131506	chr6	+	133130399	133131229	True	NM_052831,NR_002436,NR_002435,NM_001016,NR_002434	chr6,chr6,chr6,chr6,chr6	-,+,+,+,+	C6orf192,SNORA33,SNORD100,RPS12,SNORD101	-10652,7128,6711,4478,5216
chr3:36955285-36955715	chr3	+	36955339	36955521	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	31083,79319
chr11:5708130-5708663	chr11	+	5708300	5708468	True	NM_033092,NM_033093,NM_033034,NM_006074,NM_001199573	chr11,chr11,chr11,chr11,chr11	-,-,-,+,+	TRIM5,TRIM5,TRIM5,TRIM22,TRIM22	-1961,-1961,-1961,2348,2348
chr19:12448359-12449350	chr19	+	12448371	12449396	True	NM_003437,NM_145276	chr19,chr19	+,-	ZNF136,ZNF563	-174559,-3837
chr16:30368170-30369282	chr16	+	30368264	30368962	True	NR_024465,NM_013292,NM_006110	chr16,chr16,chr16	-,+,-	CD2BP2,MYLPF,CD2BP2	-2009,17160,-1582
chr5:178988066-178988978	chr5	+	178988242	178989027	True	NM_005520,NM_001040451,NM_001040452	chr5,chr5,chr5	-,+,+	HNRNPH1,RUFY1,RUFY1	61745,-1562,-1562
chr16:2962270-2962551	chr16	+	2962526	2962600	True	NM_032296,NM_022119,NM_020912	chr16,chr16,chr16	+,-,+	FLYWCH1,PRSS22,FLYWCH1	-597,-54355,-597
chr17:41394843-41395488	chr17	+	41394850	41395376	True	NR_027412,NM_145041	chr17,chr17	-,+	LOC100130581,TMEM106A	70940,-31007
chr7:76760207-76760754	chr7	+	76760471	76760763	True	NM_020879,NM_006682	chr7,chr7	+,-	CCDC146,FGL2	-8599,68444
chr7:76760207-76760754	chr7	-	102380680	102380912	False	NM_032959,NR_026879,NM_001145269,NM_001145268	chr7,chr7,chr7,chr7	-,+,+,+	POLR2J2,FAM185A,FAM185A,FAM185A	-68498,8486,8486,8486
chr12:8025905-8027122	chr12	+	8026339	8026971	True	NM_153449,NM_024865	chr12,chr12	-,+	SLC2A14,NANOG	-844,-84397
chr19:8455833-8456276	chr19	+	8455923	8456279	True	NM_198471,NM_004218	chr19,chr19	-,+	KANK3,RAB11B	-47777,-769
chr2:97403688-97404456	chr2	+	97403729	97404095	True	NM_020184,NR_024518,NR_024519,NM_001142292,NR_024521,NR_024520,NM_030805	chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-,-	CNNM4,LMAN2L,LMAN2L,LMAN2L,LMAN2L,LMAN2L,LMAN2L	22543,1778,1778,1778,1778,1778,1778
chr17:26879740-26881000	chr17	+	26879854	26881021	True	NM_054035,NM_005148,NM_003593	chr17,chr17,chr17	-,-,+	UNC119,UNC119,FOXN1	-208,-208,-28946
chr1:226174903-226175874	chr1	+	226175112	226175914	True	NM_152608,NM_002107	chr1,chr1	-,+	C1orf55,H3F3A	11202,74493
chr11:64781180-64781380	chr11	+	64781198	64781392	True	NM_001199745,NR_037650,NM_001667,NM_138456	chr11,chr11,chr11,chr11	+,+,+,-	ARL2,ARL2-SNX15,ARL2,BATF2	192,192,192,-16681
chrX:49058068-49059343	chrX	+	49058327	49059130	True	NM_002668,NM_003179	chrX,chrX	+,-	PLP2,SYP	-30206,-1666
chr3:9459260-9459715	chr3	+	9459511	9459629	True	NR_027007,NM_001080517	chr3,chr3	-,+	LOC440944,SETD5	-20337,-20164
chr5:41005336-41005651	chr5	+	41005337	41005687	True	NM_000587,NM_173489	chr5,chr5	+,-	C7,HEATR7B2	-95796,65807
chr17:8702216-8702420	chr17	+	8702220	8702314	True	NM_152599,NM_004822	chr17,chr17	-,+	MFSD6L,NTN1	403,222544
chr8:75269156-75269866	chr8	+	75269373	75269903	True	NM_018972,NM_001040875,NM_020647	chr8,chr8,chr8	+,+,-	GDAP1,GDAP1,JPH1	-6813,-6778,-35811
chr12:9272066-9273775	chr12	+	9272429	9273357	True	NM_000014,NR_026971	chr12,chr12	-,+	A2M,LOC144571	-3871,-54709
chr22:21023302-21023549	chr22	+	21023345	21023587	True	NM_002650,NR_024592	chr22,chr22	-,+	PI4KA,POM121L4P	65418,20255
chr22:21023302-21023549	chr22	+	22470527	22470582	False	NM_007128,NM_003935	chr22,chr22	+,-	VPREB1,TOP3B	128617,-133380
chr22:21023302-21023549	chr1	-	146078524	146078715	False	NM_001097616,NM_183372	chr1,chr1	+,-	GPR89C,NBPF11	-194707,3969
chr22:21023302-21023549	chr1	-	147620360	147620551	False	NM_001097616,NM_183372	chr1,chr1	+,-	GPR89C,NBPF11	-194844,3969
chr19:41881476-41881746	chr19	+	41881476	41881678	True	NM_001098824,NM_030578,NM_001098821,NM_001098822,NM_001098823,NM_001042595	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+	TMEM91,B9D2,TMEM91,TMEM91,TMEM91,TMEM91	759,-11398,759,759,759,1490
chr16:4420289-4420863	chr16	+	4420469	4420787	True	NM_016069,NM_138440	chr16,chr16	-,+	PAM16,VASN	-19096,1061
chr2:131486346-131486769	chr2	+	131486350	131486808	True	NM_207364,NM_001079530	chr2,chr2	+,-	GPR148,CFC1B	22,-129099
chr18:55886766-55888638	chr18	+	55887019	55888569	True	NM_001144966,NM_052947	chr18,chr18	+,-	NEDD4L,ALPK2	197,407670
chr7:45128051-45128372	chr7	+	45128104	45128304	True	NM_001146334,NM_001029835	chr7,chr7	-,+	NACAD,CCM2	239,-60922
chrX:30636869-30637769	chrX	+	30636912	30637652	True	NM_000167,NM_025159	chrX,chrX	+,-	GK,CXorf21	33823,-40879
chr17:74381604-74381865	chr17	+	74381770	74381888	True	NM_021972,NM_182965,NM_002766,NM_001142601,NM_001142602	chr17,chr17,chr17,chr17,chr17	+,+,-,+,+	SPHK1,SPHK1,PRPSAP1,SPHK1,SPHK1	-1131,-1131,-31540,-1131,-532
chr15:67546064-67546514	chr15	+	67546134	67546554	True	NM_001031715,NM_022784,NM_024666	chr15,chr15,chr15	+,+,-	IQCH,IQCH,AAGAB	583,583,570
chr17:55038454-55039228	chr17	+	55038494	55038885	True	NM_004645,NM_021626	chr17,chr17	-,+	COIL,SCPEP1	-83,16582
chr2:65434192-65435267	chr2	+	65434568	65435314	True	NM_001005386,NM_015543	chr2,chr2	+,-	ACTR2,RAB1A	19514,-77133
chr3:133115944-133116933	chr3	+	133116041	133116975	True	NM_003571,NM_007027	chr3,chr3	+,-	BFSP2,TOPBP1	1814,263818
chr12:101878168-101878568	chr12	+	101878355	101878423	True	NM_152323,NM_001177	chr12,chr12	+,-	SPIC,ARL1	-7074,-76783
chr12:57853832-57854075	chr12	+	57853941	57854099	True	NM_001167609,NM_001080156,NM_031479,NM_005269,NM_001160045	chr12,chr12,chr12,chr12,chr12	+,-,+,+,+	GLI1,ARHGAP9,INHBE,GLI1,GLI1	-58,17679,-4896,-58,-74
chr5:149379099-149380057	chr5	+	149379291	149379887	True	NM_014983,NM_030953	chr5,chr5	+,-	HMGXB3,TIGD6	281,380
chr9:33604154-33605858	chr9	+	33604374	33605094	True	NR_023917,NR_003573	chr9,chr9	-,+	PTENP1,ANXA2P2	72374,19128
chr12:57040856-57041919	chr12	+	57041740	57041829	True	NR_002737,NM_003725,NM_001686,NR_003046	chr12,chr12,chr12,chr12	-,+,-,-	SNORD59A,HSD17B6,ATP5B,SNORD59B	-2855,115278,-1888,-4202
chrX:118288111-118289952	chrX	+	118288145	118289786	True	NM_006667,NM_020721	chrX,chrX	+,-	PGRMC1,KIAA1210	80424,-3603
chr6:90158603-90159910	chr6	+	90158919	90159777	True	NM_021244,NM_014942	chr6,chr6	-,+	RRAGD,ANKRD6	-36924,-16073
chr7:107644414-107644937	chr7	+	107644479	107644975	True	NM_002291,NM_000108	chr7,chr7	-,+	LAMB1,DLD	-675,-112954
chr11:45871262-45871852	chr11	+	45871474	45871900	True	NM_021117,NM_001080446,NM_001127457	chr11,chr11,chr11	+,-,+	CRY2,C11orf94,CRY2	-2568,56983,-2856
chr2:132120767-132121336	chr11	+	73390739	73418489	True	NM_001130036,NM_002869	chr11,chr11	+,-	PLEKHB1,RAB6A	-58755,81462
chr2:132120767-132121336	chr2	+	132120772	132121234	False	NM_001077637,NR_036499	chr2,chr2	-,+	LOC150786,LOC389043	547,39239
chr17:40833124-40834447	chr17	+	40833346	40834327	True	NM_016602,NM_024927,NM_003632	chr17,chr17,chr17	-,-,+	CCR10,PLEKHH3,CNTNAP1	-127,-4298,304
chr8:12290885-12291506	chr8	+	12291351	12291411	True	NR_026789,NM_001137610	chr8,chr8	+,-	FAM66A,FAM86B2	-71877,2491
chr8:12290885-12291506	chr8	+	12049078	12049138	False	NM_001083537,NR_003494,NR_027425	chr8,chr8,chr8	-,-,+	FAM86B1,FAM86B1,FAM66D	2536,2536,-75841
chr6:36861003-36861722	chr6	+	36861046	36861650	True	NM_152734,NM_016059	chr6,chr6	+,-	C6orf89,PPIL1	-7464,-18246
chr19:19145966-19146961	chr19	+	19146109	19146866	True	NM_001017392,NM_014884,NM_033415,NM_001199196	chr19,chr19,chr19,chr19	-,-,+,+	SUGP2,SUGP2,ARMC6,ARMC6	-1729,-1729,-1773,-1773
chr17:7817129-7817583	chr17	+	7817462	7817544	True	NR_003000,NR_024349	chr17,chr17	+,-	SCARNA21,LOC284023	-8083,1783
chr7:96334986-96335249	chr7	+	96335160	96335296	True	NM_005222,NM_006304	chr7,chr7	+,-	DLX6,SHFM1	299993,3963
chr12:49506474-49507515	chr12	+	49507266	49507419	True	NM_005430,NM_018113	chr12,chr12	+,-	WNT1,LMBR1L	-135090,-2586
chr2:97566160-97566520	chr2	+	97566387	97566515	True	NM_001172667,NM_199078,NM_016490	chr2,chr2,chr2	-,+,-	FAM178B,CNNM3,FAM178B	-5488,-84447,-2517
chr8:124543515-124544137	chr8	+	124543528	124544159	True	NM_148177,NM_018024,NM_058229	chr8,chr8,chr8	-,+,-	FBXO32,WDYHV1,FBXO32	274,-114615,9337
chr17:48207832-48208199	chr17	+	48207875	48208247	True	NM_001199899,NM_174920,NM_000023	chr17,chr17,chr17	+,-,+	PDK2,SAMD14,SGCA	-34867,-708,35118
chr12:123013683-123014647	chr12	+	123013734	123014685	True	NR_036436,NM_014708,NR_036434,NR_036435,NM_023012	chr12,chr12,chr12,chr12,chr12	-,+,-,-,-	RSRC2,KNTC1,RSRC2,RSRC2,RSRC2	-2174,-1977,-2174,-2174,-2174
chr21:46065458-46065772	chr21	+	46065557	46065784	True	NM_198698,NM_181688,NM_198692	chr21,chr21,chr21	-,+,+	KRTAP12-4,KRTAP10-10,KRTAP10-11	8843,-8335,546
chr19:7028163-7028597	chr19	+	7028162	7028337	True	NM_001164419,NM_001136507	chr19,chr19	-,+	MBD3L4,MBD3L5	11906,2256
chr19:7028163-7028597	chr19	-	7042452	7042627	False	NM_001164419,NM_144614	chr19,chr19	-,+	MBD3L4,MBD3L2	-2268,6723
chr19:7028163-7028597	chr19	-	7060909	7061084	False	NM_001044388,NM_024341,NM_001164425,NM_001044387	chr19,chr19,chr19,chr19	+,+,-,+	ZNF557,ZNF557,MBD3L3,ZNF557	8386,8386,-2264,8386
chr8:1713462-1714181	chr8	+	1713733	1714225	True	NR_033895,NM_018941	chr8,chr8	-,+	LOC286083,CLN8	-462906,-1930
chr12:130529212-130529638	chr12	+	130529239	130529537	True	NR_024457,NM_007197	chr12,chr12	-,+	LOC100190940,FZD10	-2352,117466
chr16:55909617-55910377	chr16	+	55909655	55910351	True	NM_145024,NR_003276,NM_001143685	chr16,chr16,chr16	-,+,-	CES5A,CES1P1,CES5A	-373,-115196,-373
chr4:645549-645890	chr4	+	645556	645890	True	NM_007100,NM_001145292	chr4,chr4	-,+	ATP5I,PDE6B	22287,1075
chr2:131858842-131860389	chr2	+	131859020	131859997	True	NM_001100623,NM_017958,NM_001009993	chr2,chr2,chr2	+,+,-	PLEKHB2,PLEKHB2,FAM168B	2422,2422,-8016
chr22:35699649-35700562	chr22	+	35699802	35700410	True	NM_001135729,NM_005368,NM_001135732,NM_001135730,NM_005488,NR_024194,NR_024195	chr22,chr22,chr22,chr22,chr22,chr22,chr22	+,-,+,+,+,+,+	TOM1,MB,TOM1,TOM1,TOM1,TOM1,TOM1	-4586,313024,-4057,-4057,-4057,-4057,-4057
chr2:228235396-228236476	chr2	+	228235536	228236380	True	NM_020194,NM_024795	chr2,chr2	+,-	MFF,TM4SF20	-43359,7692
chr9:131582296-131584211	chr9	+	131582373	131583433	True	NM_016390,NM_004435	chr9,chr9	-,+	C9orf114,ENDOG	8702,-1645
chr20:3996580-3996827	chr20	+	3996738	3996811	True	NM_001134337,NR_029519,NM_001134338,NM_007219	chr20,chr20,chr20,chr20	-,+,-,-	RNF24,MIR103-2,RNF24,RNF24	-522,-98651,-522,-684
chr4:119274417-119274739	chr4	+	119274483	119274783	True	NR_002963,NM_003619	chr4,chr4	+,-	SNORA24,PRSS12	-74189,-561
chr5:31807336-31807807	chr5	+	31807342	31807725	True	NR_036241,NM_178140	chr5,chr5	-,+	MIR4279,PDZD2	128591,-8362
chr8:42200762-42201681	chr8	+	42201044	42201378	True	NM_014420,NM_002690	chr8,chr8	-,+	DKK4,POLB	33348,-5080
chr1:161384226-161385965	chr1	+	161384576	161385941	True	NM_001136219,NM_001013625	chr1,chr1	+,-	FCGR2A,C1orf192	89263,-46912
chr4:15780722-15781082	chr4	+	15780818	15781108	True	NR_036464,NM_001775	chr4,chr4	-,+	FBXL5,CD38	-123783,-939
chr1:43766298-43767012	chr1	+	43766383	43766989	True	NM_005424,NM_001164829	chr1,chr1	+,-	TIE1,C1orf210	-34,-15095
chr1:77612404-77612954	chr1	+	77612595	77612845	True	NM_174858,NM_005482	chr1,chr1	+,-	AK5,PIGK	134816,72337
chr10:51624783-51626729	chr10	+	51624890	51626682	True	NM_001145262,NM_006327	chr10,chr10	+,-	NCOA4,TIMM23	-48657,-1554
chr10:51624783-51626729	chr10	-	51368072	51369864	False	NR_029388,NM_003631,NM_002443	chr10,chr10,chr10	-,-,+	LOC728407,PARG,MSMB	1503,1518,179688
chr2:224895889-224896485	chr2	+	224895909	224896452	True	NM_022915,NM_001136530,NM_006216,NM_001136528	chr2,chr2,chr2,chr2	+,-,-,-	MRPL44,SERPINE2,SERPINE2,SERPINE2	-73839,6956,7635,7635
chr2:170430385-170431559	chr2	+	170430495	170431015	True	NM_004792,NM_024622	chr2,chr2	+,-	PPIG,FASTKD1	9834,-71
chr15:31285413-31285885	chr15	+	31285461	31285781	True	NM_017762,NM_014967	chr15,chr15	-,+	MTMR10,FAN1	-1654,-89437
chr16:90096323-90097542	chr16	+	90096474	90097567	True	NM_001214,NR_023348	chr16,chr16	-,+	C16orf3,GAS8	-165,-7517
chrX:52829342-52829679	chrX	+	52829436	52829731	True	NM_130775,NM_001009616	chrX,chrX	+,-	XAGE5,SPANXN5	11496,-3048
chrX:52829342-52829679	chrX	-	52475841	52476136	False	NR_033251,NM_001097592	chrX,chrX	-,+	XAGE1C,XAGE1A	57015,35624
chrX:52829342-52829679	chrX	-	52202901	52203196	False	NR_033251,NM_001097592	chrX,chrX	-,+	XAGE1C,XAGE1A	57015,35613
chrX:52829342-52829679	chrX	+	52295977	52296272	False	NR_033257,NM_020411	chrX,chrX	+,-	XAGE1E,XAGE1D	-57016,-35614
chr1:150979902-150980844	chr1	+	150980168	150980810	True	NM_001040217,NM_021222,NM_001163258,NM_001163259,NM_018379,NM_001163260	chr1,chr1,chr1,chr1,chr1,chr1	-,+,-,-,-,-	FAM63A,PRUNE,FAM63A,FAM63A,FAM63A,FAM63A	-783,162,94,-895,94,-895
chr1:28830477-28831172	chr1	+	28830820	28830931	True	NR_002909,NR_030725,NR_030726,NR_036473,NM_001048199,NR_003077	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-	SNHG3,RCC1,RCC1,SNHG3,RCC1,SNORD99	1523,1523,1523,1523,1523,74454
chr7:132757521-132758183	chr7	+	132757596	132758190	True	NM_001037126,NM_017812	chr7,chr7	+,-	EXOC4,CHCHD3	179632,8688
chr7:18591070-18592200	chr7	+	18591123	18592126	True	NM_001204148,NM_175886	chr7,chr7	+,-	HDAC9,PRPS1L1	-42274,-523637
chr14:105561141-105562463	chr14	+	105561148	105562446	True	NM_174891,NM_013345	chr14,chr14	+,-	C14orf79,GPR132	-108592,-29394
chr11:6231561-6232289	chr11	+	6231604	6232290	True	NM_173525,NM_001098794	chr11,chr11	+,-	C11orf42,FAM160A2	-4857,23701
chr3:113159069-113160032	chr3	+	113159269	113159804	True	NM_018338,NM_017699,NM_001164496	chr3,chr3,chr3	-,+,-	WDR52,SIDT1,WDR52	616,91413,616
chr3:98312214-98312418	chr3	+	98312222	98312404	True	NM_005290,NM_000097	chr3,chr3	+,-	GPR15,CPOX	-61395,101
chrX:48055393-48057151	chrX	+	48056173	48056911	True	NM_175723,NM_021015,NM_005635	chrX,chrX,chrX	-,-,+	SSX5,SSX5,SSX1	22,22,57885
chr1:47279262-47279944	chr1	+	47279427	47279965	True	NM_001099772,NR_002788	chr1,chr1	+,-	CYP4B1,CYP4Z2P	-14808,86232
chr6:84590578-84592427	chr6	+	84590801	84592208	True	NR_026669,NM_016230	chr6,chr6	-,+	SNAP91,CYB5R4	-171674,-21482
chr11:108422934-108423642	chr11	+	108422970	108423333	True	NM_015065,NM_004398	chr11,chr11	-,+	EXPH5,DDX10	41092,112482
chr2:225266365-225266874	chr2	+	225266502	225266894	True	NM_022915,NM_001122779,NM_024785	chr2,chr2,chr2	+,-,-	MRPL44,FAM124B,FAM124B	-444432,-15,-15
chr12:2163275-2163541	chr12	+	2163464	2163590	True	NM_001129834,NM_001129835,NM_001129836,NM_001129837,NM_001129830,NM_001129831,NM_001129832,NM_001129833,NM_001129838,NM_001129839,NM_199460,NM_001129841,NM_001129840,NM_001129843,NM_001129842,NM_001129844,NM_001129846,NM_001129827,NM_152640,NM_001129829,NM_000719,NM_001167623,NM_001167625,NM_001167624	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,-,+,+,+,+,+	CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,DCP1B,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C	-1099,-1099,-1099,-1099,-1099,-1099,-1099,-1099,-1099,-1099,-1099,-1099,-1099,-1099,-1099,-1099,-1099,-1099,-49787,-1099,-1099,-1099,-1099,-1099
chr1:211497534-211499373	chr1	+	211497898	211499258	True	NM_004619,NM_001164688,NM_001033910	chr1,chr1,chr1	+,-,+	TRAF5,RD3,TRAF5	698,167051,889
chr16:30479940-30481274	chr16	+	30480459	30481114	True	NM_012248,NM_002209,NM_001114380	chr16,chr16,chr16	-,+,+	SEPHS2,ITGAL,ITGAL	-23235,2868,2868
chr10:99095353-99095585	chr10	+	99095353	99095462	True	NM_005479,NM_012083	chr10,chr10	+,-	FRAT1,FRAT2	-16382,-895
chr10:97421045-97422800	chr10	+	97421172	97422350	True	NM_001098175,NM_001017423,NM_002860	chr10,chr10,chr10	+,-,-	ENTPD1,ALDH18A1,ALDH18A1	49185,-4605,-4605
chr17:6348017-6348468	chr17	+	6348033	6348455	True	NM_019013,NM_014336,NM_001033054,NM_001195228,NM_001033055	chr17,chr17,chr17,chr17,chr17	+,-,-,+,-	FAM64A,AIPL1,AIPL1,FAM64A,AIPL1	-349,-9514,-9514,-349,-9514
chr7:55797570-55798498	chr7	+	55797916	55798294	True	NM_182633,NR_003949	chr7,chr7	+,-	ZNF713,FKBP9L	182036,-25656
chr14:98612090-98613136	chr14	+	98612090	98613154	True	NR_015430,NM_182560	chr14,chr14	-,+	C14orf64,C14orf177	-167629,564795
chr1:156271430-156271720	chr1	+	156271484	156271620	True	NM_144580,NM_032323,NM_001004319	chr1,chr1,chr1	-,+,-	C1orf85,TMEM79,VHLL	-6035,-17467,-2056
chr17:37011316-37011582	chr17	+	37011448	37011560	True	NR_002576,NM_000978,NM_006148	chr17,chr17,chr17	-,-,+	SNORA21,RPL23,LASP1	-2200,-1395,14551
chr17:79281830-79282185	chr17	+	79281889	79282231	True	NM_178519,NR_038080,NM_001086521	chr17,chr17,chr17	-,-,+	C17orf55,C17orf55,C17orf89	867,867,-68829
chr17:71816375-71817203	chr17	+	71816814	71817246	True	NM_000999,NR_027146	chr17,chr17	+,-	RPL38,C17orf54	382548,7480
chr5:74043781-74044612	chr5	+	74043814	74044422	True	NM_014886,NM_032380	chr5,chr5	+,-	NSA2,GFM2	18680,18670
chr7:100727712-100728633	chr7	+	100727851	100728561	True	NM_003378,NM_030961	chr7,chr7	-,+	VGF,TRIM56	80341,224
chrX:152909095-152909329	chrX	+	152909241	152909347	True	NM_001395,NM_001135740	chrX,chrX	+,-	DUSP9,PNCK	-1395,29446
chr14:73700831-73701114	chr14	+	73700955	73701079	True	NM_021260,NM_173462	chr14,chr14	-,+	ZFYVE1,PAPLN	-207035,3125
chr22:28319311-28321039	chr22	+	28319310	28321017	True	NR_036169,NR_026963,NR_026962,NM_012399,NR_036170	chr22,chr22,chr22,chr22,chr22	-,+,+,-,+	MIR3199-1,TTC28-AS1,TTC28-AS1,PITPNB,MIR3199-2	-2710,-3998,-3998,-4055,-2848
chr8:10695649-10696904	chr8	+	10696075	10696801	True	NM_001040032,NM_017884	chr8,chr8	+,-	C8orf74,PINX1	-165979,548
chr17:29425671-29426872	chr17	+	29426061	29426919	True	NM_001128147,NM_001042492,NM_000267,NM_024683	chr17,chr17,chr17,chr17	+,+,+,-	NF1,NF1,NF1,C17orf42	-4167,-4167,-4167,-192775
chr9:137808247-137808959	chr9	+	137808486	137808984	True	NM_015837,NM_002003	chr9,chr9	+,-	FCN2,FCN1	-35879,872
chr2:191398369-191399138	chr2	+	191398513	191399115	True	NM_001142645,NM_005966	chr2,chr2	-,+	TMEM194B,NAB1	403,114732
chr1:14672910-14673959	chr1	+	14673004	14673958	True	NM_015209,NR_027136	chr1,chr1	+,-	KAZN,C1orf126	251254,805052
chr4:89300134-89300336	chr4	+	89300172	89300378	True	NM_017912,NM_001165136,NM_152542	chr4,chr4,chr4	+,+,-	HERC6,HERC6,PPM1K	-332,-332,-94284
chr9:132599983-132600614	chr9	+	132600013	132600325	True	NM_006676,NM_001110303,NM_016520,NM_001008563	chr9,chr9,chr9,chr9	+,+,-,+	USP20,USP20,C9orf78,USP20	-2377,-2377,-2441,-2316
chr16:30249916-30250770	chr16	+	30250256	30250654	True	NR_002555,NM_177552	chr16,chr16	-,+	LOC613037,SULT1A3	6328,-39763
chr16:30249916-30250770	chr16	+	29510288	29510686	False	NR_002557,NM_177552	chr16,chr16	-,+	LOC613038,SULT1A3	-31389,-39137
chr16:30249916-30250770	chr16	-	22531374	22531772	False	NM_001135865,NR_027460	chr16,chr16	+,-	LOC100132247,RRN3P3	-6581,-82338
chr16:30249916-30250770	chr16	+	21429773	21430171	False	NR_026675,NM_130464	chr16,chr16	+,-	NCRNA00169,NPIPL3	-117659,6537
chr16:30249916-30250770	chr16	+	21862043	21862441	False	NM_003366,NR_003370	chr16,chr16	+,-	UQCRC2,RRN3P1	102167,-31548
chr12:124445788-124446191	chr12	+	124445799	124446215	True	NM_025140,NM_001204298	chr12,chr12	-,+	CCDC92,ZNF664	10998,11546
chr16:50187497-50187707	chr16	+	50187513	50187611	True	NM_001040285,NM_001040284,NM_001173984	chr16,chr16,chr16	+,+,-	PAPD5,PAPD5,BRD7	-735,-735,215284
chr1:52501306-52503043	chr1	+	52501443	52502728	True	NM_001136497,NM_138417	chr1,chr1	+,-	BTF3L4,KTI12	19128,-1971
chr12:9800746-9801517	chr12	+	9801028	9801463	True	NM_002258,NR_002814	chr12,chr12	-,+	KLRB1,LOC374443	-40531,-436
chr6:53200074-53200478	chr6	+	53200216	53200526	True	NM_012347,NM_021814	chr6,chr6	+,-	FBXO9,ELOVL5	-264496,13466
chr3:151038593-151039752	chr3	+	151038693	151039775	True	NM_053002,NM_176894,NM_023915	chr3,chr3,chr3	+,-,-	MED12L,P2RY13,GPR87	-234069,7619,-4057
chr7:139039229-139040978	chr7	+	139039420	139040764	True	NM_016019,NR_033999	chr7,chr7	+,-	LUC7L2,LOC100129148	3869,71563
chr3:38317130-38317630	chr3	+	38317145	38317617	True	NM_004256,NR_024024	chr3,chr3	+,-	SLC22A13,ACAA1	-9898,-138412
chr9:95294436-95295504	chr9	+	95294622	95295274	True	NR_036505,NM_001393,NM_001197295,NM_001197296	chr9,chr9,chr9,chr9	+,-,-,-	LOC100128361,ECM2,ECM2,ECM2	85057,3163,3163,3163
chr11:118274362-118275060	chr11	+	118274534	118275090	True	NR_033759,NM_001040651,NM_006476	chr11,chr11,chr11	+,-,+	ATP5L,CD3D,ATP5L	-2486,-61075,-2486
chr3:39450498-39452339	chr3	+	39450615	39452164	True	NM_001171174,NM_001012321,NR_002325,NR_002324,NM_002295	chr3,chr3,chr3,chr3,chr3	-,+,+,+,+	CX3CR1,RPSA,SNORA6,SNORA62,RPSA	-127389,-1559,-788,380,-2466
chrX:31278641-31279532	chrX	+	31278677	31279483	True	NM_203391,NM_004018,NM_004019,NM_004015,NM_004016,NM_004017	chrX,chrX,chrX,chrX,chrX,chrX	+,-,-,-,-,-	GK,DMD,DMD,DMD,DMD,DMD	-607253,5595,5595,5595,5595,5595
chr5:173145201-173145511	chr5	+	173145206	173145548	True	NR_027109,NM_138369	chr5,chr5	+,-	LOC285593,BOD1	-138604,-101540
chr10:73609328-73610731	chr10	+	73609598	73610506	True	NM_001042466,NM_001042465,NM_002778,NM_001171936	chr10,chr10,chr10,chr10	-,-,-,+	PSAP,PSAP,PSAP,CDH23	626,626,626,-38016
chr20:31597413-31599004	chr20	+	31597439	31598565	True	NM_025227,NM_080675	chr20,chr20	+,-	BPIL1,SUN5	-2083,-5200
chr11:65727393-65727924	chr11	+	65727394	65727818	True	NM_031450,NM_005146	chr11,chr11	-,+	C11orf68,SART1	-40863,1341
chr7:73135182-73136192	chr7	+	73135485	73136223	True	NM_004603,NR_036247,NM_001165903	chr7,chr7,chr7	-,+,-	STX1A,MIR4284,STX1A	-1468,-9889,-1468
chr7:155248598-155249358	chr7	+	155248694	155249381	True	NM_001103176,NM_001427	chr7,chr7	-,+	CNPY1,EN2	77211,1442
chr3:125315834-125316138	chr3	+	125315953	125316071	True	NM_022776,NR_024250	chr3,chr3	-,+	OSBPL11,LOC100125556	-1572,319372
chr10:115801478-115803120	chr10	+	115801903	115802751	True	NM_000684,NR_031747	chr10,chr10	+,-	ADRB1,MIR2110	1054,131237
chr1:61548582-61548886	chr1	+	61548686	61548892	True	NM_001145511,NM_001145512,NM_032027,NM_005595,NM_001134673	chr1,chr1,chr1,chr1,chr1	+,+,-,+,+	NFIA,NFIA,TM2D1,NFIA,NFIA	-5791,-1203,642253,-757,-757
chr19:1383546-1383810	chr19	+	1383622	1383858	True	NM_000156,NM_024407	chr19,chr19	-,+	GAMT,NDUFS7	17744,24
chr5:173411608-173413458	chr5	+	173411619	173413189	True	NM_138369,NM_001144954	chr5,chr5	-,+	BOD1,C5orf47	-367953,2972
chr6:39897107-39897399	chr6	+	39897117	39897395	True	NM_001075098,NR_033233,NM_005943,NM_015345	chr6,chr6,chr6,chr6	-,-,-,+	MOCS1,MOCS1,MOCS1,DAAM2	4945,4945,-1662,-136395
chr19:41772192-41772702	chr19	+	41772530	41772725	True	NM_144732,NM_007040,NM_000660	chr19,chr19,chr19	+,+,-	HNRNPUL1,HNRNPUL1,TGFB1	-4191,-2462,87157
chr1:27648954-27650186	chr1	+	27649224	27649826	True	NR_037576,NM_004672,NR_037577,NM_032125,NR_033926,NR_037580	chr1,chr1,chr1,chr1,chr1,chr1	+,-,+,+,+,+	TMEM222,MAP3K6,TMEM222,TMEM222,LOC644961,TMEM222	-639,43561,-639,-639,538,-639
chr3:119331215-119331426	chr3	+	119331214	119331342	True	NM_015900,NM_022135	chr3,chr3	+,-	PLA1A,POPDC2	-14550,48120
chr3:114013193-114014595	chr3	+	114013258	114014415	True	NR_030293,NM_173799	chr3,chr3	-,+	MIR568,TIGIT	21051,-476
chr17:2418170-2419480	chr17	+	2418301	2419369	True	NM_000430,NM_024086	chr17,chr17	+,-	PAFAH1B1,METTL16	77553,-3101
chr9:34455910-34456320	chr9	+	34456248	34456368	True	NM_001184941,NM_001184940,NM_001184943,NM_001184942,NM_001184945,NM_012144,NM_147202	chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,-,-,-,-,+,-	C9orf25,C9orf25,C9orf25,C9orf25,C9orf25,DNAI1,C9orf25	2250,2250,2250,2250,2250,2442,2250
chr1:154244832-154245042	chr1	+	154244837	154245083	True	NM_001018837,NM_138740,NM_006118	chr1,chr1,chr1	+,-,+	HAX1,C1orf43,HAX1	-37,-51564,-37
chr11:76841260-76842901	chr11	+	76841362	76842844	True	NM_182833,NM_001127180,NM_000260,NM_001127179	chr11,chr11,chr11,chr11	-,+,+,+	GDPD4,MYO7A,MYO7A,MYO7A	155669,-2097,-2103,-2103
chr1:149980456-149981688	chr1	+	149980456	149981706	True	NM_007259,NM_020205	chr1,chr1	+,-	VPS45,OTUD7B	57635,1030
chr12:29431363-29432948	chr12	+	29431618	29432747	True	NM_018099,NM_016570	chr12,chr12	+,-	FAR2,ERGIC2	-55079,101446
chr9:79072464-79073189	chr9	+	79072463	79073095	True	NM_018339,NM_001490,NM_001097633	chr9,chr9,chr9	-,+,+	RFK,GCNT1,GCNT1	-63019,972,972
chrX:110382118-110383291	chrX	+	110382292	110383256	True	NM_001128173,NM_014289	chrX,chrX	+,-	PAK3,CAPN6	-16046,130576
chr1:36348214-36348661	chr1	+	36348213	36348663	True	NM_012199,NM_022111	chr1,chr1	+,-	EIF2C1,CLSPN	146,-112662
chr1:145941934-145942269	chr1	+	145942009	145942303	True	NR_003377,NM_001097616	chr1,chr1	-,+	PDZK1P1,GPR89C	366,-58192
chr1:145941934-145942269	chr1	+	147483721	147484015	False	NR_003377,NM_001097616	chr1,chr1	-,+	PDZK1P1,GPR89C	366,-58205
chr9:139686401-139686641	chr9	+	139686415	139686663	True	NM_001039374,NM_032928,NR_024580	chr9,chr9,chr9	+,+,-	KIAA1984,TMEM141,LOC100131193	4126,-689,16687
chr17:38134654-38136546	chr17	+	38135613	38136593	True	NM_139280,NM_002809	chr17,chr17	-,+	ORMDL3,PSMD3	-51729,466
chr11:61890394-61891222	chr11	+	61890535	61891237	True	NM_001040694,NM_002032,NM_020238	chr11,chr11,chr11	+,-,+	INCENP,FTH1,INCENP	207,-155403,207
chr10:103543280-103545024	chr10	+	103543358	103544984	True	NM_006993,NM_033164,NM_033165,NM_033163,NR_036114,NM_006119	chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,+,-	NPM3,FGF8,FGF8,FGF8,MIR3158-1,FGF8	-188,-7599,-7599,-7599,-182235,-7599
chr12:4222905-4223495	chr12	+	4222907	4223264	True	NM_001759,NM_020367	chr12,chr12	+,-	CCND2,PARP11	159637,-240299
chr11:125460407-125461010	chr11	+	125460429	125460507	True	NM_001612,NM_152713	chr11,chr11	-,+	ACRV1,STT3A	90340,2231
chr17:73976343-73976769	chr17	+	73976439	73976514	True	NM_001113324,NM_001185039,NM_007292,NR_037709,NM_004035	chr17,chr17,chr17,chr17,chr17	+,-,-,+,-	C17orf106,ACOX1,ACOX1,C17orf106-CDK3,ACOX1	-1192,-924,-924,-1192,-924
chr17:18420669-18422411	chr17	+	18420776	18422351	True	NR_026809,NR_003554,NM_001040078	chr17,chr17,chr17	-,-,+	FAM106A,LOC220594,LGALS9C	7859,2265,-40735
chr17:18420669-18422411	chr17	-	20329149	20329202	False	NR_023380,NM_001042685	chr17,chr17	+,-	CCDC144C,LGALS9B	-104716,41699
chr1:201391745-201392425	chr1	+	201391745	201392103	True	NM_003281,NR_026667	chr1,chr1	-,+	TNNI1,RPS10P7	-871,96928
chr14:50698873-50699561	chr14	+	50698958	50699591	True	NM_006939,NM_015684	chr14,chr14	-,+	SOS2,ATP5S	-859,79455
chrX:48427959-48428788	chrX	+	48428322	48428768	True	NM_006743,NM_033518	chrX,chrX	+,-	RBM3,SLC38A5	4067,-99678
chr19:39990855-39992546	chr19	+	39991170	39992380	True	NM_016941,NM_152361,NM_203486	chr19,chr19,chr19	+,-,+	DLL3,EID2B,DLL3	-1664,31164,-1664
chr8:104945104-104945774	chr8	+	104945727	104945791	True	NM_014677,NM_030780	chr8,chr8	+,-	RIMS2,SLC25A32	-114368,-518259
chr2:231917824-231918120	chr2	+	231917955	231918159	True	NR_033879,NM_002807,NM_001191037,NR_034059	chr2,chr2,chr2,chr2	-,+,+,+	LOC348761,PSMD1,PSMD1,PSMD1	-57208,3418,3418,3418
chr2:88380543-88381248	chr2	+	88380737	88381297	True	NM_016618,NM_198274	chr2,chr2	-,+	KRCC1,SMYD1	-25489,-13502
chr19:19381269-19382498	chr19	+	19381325	19382171	True	NM_023002,NM_001001524,NM_015329	chr19,chr19,chr19	-,-,+	HAPLN4,TM6SF2,MAU2	-7729,1953,49458
chr6:84770563-84772157	chr6	+	84770813	84771927	True	NM_014895,NM_138409	chr6,chr6	-,+	KIAA1009,MRAP2	165462,-27457
chr18:21030802-21031155	chr18	+	21030902	21031150	True	NM_003831,NM_032933	chr18,chr18	+,-	RIOK3,C18orf45	1636,-12977
chr3:80837851-80839332	chr3	+	80837940	80839346	True	NM_001128929,NM_000158	chr3,chr3	+,-	ROBO2,GBE1	-3690828,971654
chr16:67465111-67465313	chr16	+	67465142	67465362	True	NM_013304,NM_000196	chr16,chr16	-,+	ZDHHC1,HSD11B2	-14803,-157
chrY:14466989-14467919	chrY	+	14467058	14467914	True	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	306383,65525
chrY:14466989-14467919	chrY	+	14466741	14466821	False	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	307476,66648
chr21:33749196-33749989	chr21	+	33749314	33749846	True	NR_002996,NR_026845	chr21,chr21	-,+	SNORA80,C21orf119	31,15595
chr12:116972367-116972642	chr12	+	116972366	116972662	True	NR_027346,NR_027345,NM_024738	chr12,chr12,chr12	+,+,-	NCRNA00173,NCRNA00173,C12orf49	-1177,-1190,203231
chr6:159067199-159067427	chr6	+	159067212	159067290	True	NM_006519,NM_001009991	chr6,chr6	-,+	DYNLT1,SYTL3	-1408,3755
chr9:100617476-100617689	chr9	+	100617534	100617738	True	NM_004473,NM_016481	chr9,chr9	+,-	FOXE1,C9orf156	-2048,67164
chr3:136704946-136705567	chr3	+	136705239	136705567	True	NM_144717,NM_005862	chr3,chr3	+,-	IL20RB,STAG1	-28596,-233994
chr20:44563981-44564181	chr20	+	44564100	44564206	True	NM_022104,NM_182676	chr20,chr20	+,-	PCIF1,PLTP	-841,-23314
chr17:1946297-1947713	chr17	+	1946360	1947264	True	NR_029674,NR_029625,NM_080822	chr17,chr17,chr17	-,-,+	MIR132,MIR212,OVCA2	6088,6460,-1135
chr7:105928171-105929025	chr7	+	105928290	105929062	True	NM_152750,NM_005746	chr7,chr7	+,-	CDHR3,NAMPT	-324685,-2652
chr15:44964535-44965251	chr15	+	44964560	44964939	True	NM_025137,NM_004048,NM_001160227,NM_001145112	chr15,chr15,chr15,chr15	-,+,-,-	SPG11,B2M,SPG11,PATL2	-8684,38745,-8684,4198
chr11:60551435-60551780	chr11	+	60551445	60551693	True	NM_206893,NM_004778	chr11,chr11	+,-	MS4A10,GPR44	1127,71802
chr19:38916237-38916680	chr19	+	38916495	38916565	True	NM_170604,NM_001146204,NM_001146205,NM_001146206,NM_001146207,NM_001146202,NM_001146203,NM_000540,NM_001042723	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,+,+	RASGRP4,RASGRP4,RASGRP4,RASGRP4,RASGRP4,RASGRP4,RASGRP4,RYR1,RYR1	430,430,430,430,430,430,430,7774,7774
chr20:2444931-2445438	chr20	+	2444935	2445104	True	NR_003684,NM_003091,NM_080751,NM_198216	chr20,chr20,chr20,chr20	-,-,+,-	SNORD119,SNRPB,TMC2,SNRPB	-1242,6458,72148,6458
chr22:23874528-23874755	chr22	+	23874589	23874803	True	NM_153615,NM_020070	chr22,chr22	+,-	RGL4,IGLL1	158244,47742
chr16:8815430-8816057	chr16	+	8815432	8816080	True	NM_001127448,NM_000663,NM_015421	chr16,chr16,chr16	+,+,-	ABAT,ABAT,TMEM186	-910,-8657,75475
chr17:38073419-38074751	chr17	+	38073458	38074736	True	NM_139280,NM_001042471,NM_018530,NM_001165959,NM_001165958,NM_001195545	chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,+	ORMDL3,GSDMB,GSDMB,GSDMB,GSDMB,LOC100505591	9198,217,249,217,217,22990
chr11:14909423-14911394	chr11	+	14909489	14911194	True	NM_024514,NM_000728	chr11,chr11	-,+	CYP2R1,CALCB	2609,183951
chrX:21476820-21477300	chrX	+	21477022	21477137	True	NM_153270,NM_014927	chrX,chrX	-,+	KLHL34,CNKSR2	199374,-84550
chr10:7751257-7751907	chr10	+	7751256	7751686	True	NM_001001851,NM_002216	chr10,chr10	-,+	ITIH5,ITIH2	-42295,-6071
chr11:67980123-67980342	chr11	+	67980158	67980286	True	NM_017635,NM_002335,NM_016028	chr11,chr11,chr11	-,+,-	SUV420H1,LRP5,SUV420H1	548,99821,548
chr8:97272291-97273064	chr8	+	97272458	97273037	True	NM_015942,NM_014754	chr8,chr8	-,+	MTERFD1,PTDSS1	810,1129
chr12:94852368-94853404	chr12	+	94852684	94853374	True	NM_001042399,NM_016122,NR_027035	chr12,chr12,chr12	-,-,+	CCDC41,CCDC41,LOC144486	440,440,404
chr10:85955446-85955766	chr10	+	85955488	85955710	True	NM_033100,NM_001171971,NM_001017924	chr10,chr10,chr10	+,+,-	CDHR1,CDHR1,LRIT2	-1127,-1127,29624
chr9:34521775-34522808	chr9	+	34521793	34522709	True	NR_024369,NM_198573	chr9,chr9	+,-	LOC415056,ENHO	45300,378
chr6:160328163-160328628	chr6	+	160328176	160328654	True	NM_002377,NM_030752	chr6,chr6	+,-	MAS1,TCP1	-253,-117441
chrX:153046725-153047087	chrX	+	153046967	153047029	True	NM_014370,NM_001170760,NM_001170761,NM_004135	chrX,chrX,chrX,chrX	+,+,+,-	SRPK3,SRPK3,SRPK3,IDH3G	-562,-562,-562,12988
chr11:118479474-118480377	chr11	+	118479486	118480356	True	NM_001144758,NM_001144759,NM_015157,NM_020153	chr11,chr11,chr11,chr11	+,+,+,-	PHLDB1,PHLDB1,PHLDB1,IFT46	-1231,-1231,-2324,-42695
chr1:247651117-247651630	chr1	+	247651124	247651674	True	NM_001004492,NM_001004698	chr1,chr1	-,+	OR2B11,OR2W5	-35840,2695
chr3:184458685-184459106	chr3	+	184458852	184459152	True	NM_001009921,NM_022149	chr3,chr3	+,-	VPS8,MAGEF1	70778,-29016
chrX:115592028-115592919	chrX	+	115592056	115592966	True	NM_007231,NM_001017978	chrX,chrX	+,-	SLC6A14,CXorf61	-24369,1221
chr9:111776310-111776902	chr9	+	111776313	111776803	True	NM_003798,NM_017832	chr9,chr9	-,+	CTNNAL1,C9orf6	-549,-79691
chr17:32501-32934	chr17	+	32518	32980	True	NM_001013672,NM_003585	chr17,chr17	+,-	C17orf97,DOC2B	227137,-1098
chr15:20746641-20748319	chr15	+	20746681	20748266	True	NR_027411,NM_001145004	chr15,chr15	+,-	GOLGA8C,GOLGA6L6	19407,407
chr8:50822849-50823242	chr8	+	50822883	50823229	True	NM_003068,NM_018967	chr8,chr8	-,+	SNAI2,SNTG1	-988884,1367
chr19:11404732-11405122	chr19	+	11404757	11405018	True	NM_020812,NM_012466	chr19,chr19	-,+	DOCK6,TSPAN16	-31600,1805
chr12:6745566-6745876	chr12	+	6745632	6745924	True	NM_001164094,NM_001142961,NM_020400	chr12,chr12,chr12	+,-,-	COPS7A,LPAR5,LPAR5	87225,-4817,-335
chr6:114176467-114177481	chr6	+	114176475	114177509	True	NM_001527,NM_002356	chr6,chr6	-,+	HDAC2,MARCKS	114900,1017
chr1:167921546-167922928	chr1	+	167921863	167922817	True	NM_018442,NM_015415	chr1,chr1	+,-	DCAF6,BRP44	-16117,-15556
chr2:190649505-190650098	chr2	+	190649589	190650123	True	NM_001128143,NM_016467,NM_001128144,NM_001128150,NM_000534	chr2,chr2,chr2,chr2,chr2	+,-,+,-,+	PMS1,ORMDL1,PMS1,ORMDL1,PMS1	-836,-492,-836,-492,-836
chr3:69937192-69937792	chr3	+	69937342	69937742	True	NM_015123,NM_198177	chr3,chr3	-,+	FRMD4B,MITF	-501912,-22025
chr19:39235076-39236161	chr19	+	39235154	39236114	True	NM_144691,NM_001042507	chr19,chr19	-,+	CAPN12,LGALS7B	-40,43735
chr7:30318159-30318938	chr7	+	30318192	30318968	True	NR_037513,NM_147128	chr7,chr7	-,+	MIR550B1,ZNRF2	10588,4954
chr13:113028436-113029813	chr13	+	113028480	113029250	True	NM_006322,NM_145248	chr13,chr13	-,+	TUBGCP3,SPACA7	213281,1400
chr17:80230008-80230556	chr17	+	80230241	80230495	True	NM_001893,NM_001042423,NM_139062	chr17,chr17,chr17	-,+,-	CSNK1D,SLC16A3,CSNK1D	1149,-40156,1149
chr21:27541276-27541947	chr21	+	27541331	27541783	True	NM_201413,NM_000484,NM_001204302,NM_201414,NM_001204301,NM_001136129,NM_002040,NM_001136131,NM_001136130,NM_001204303	chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21	-,-,-,-,-,-,+,-,-,-	APP,APP,APP,APP,APP,APP,GABPA,APP,APP,APP	1405,1405,1405,1405,1405,1405,-434053,1713,1405,1405
chr15:74900246-74900629	chr15	+	74900256	74900656	True	NM_001130028,NM_003992,NM_001142443	chr15,chr15,chr15	+,+,-	CLK3,CLK3,EDC3	6678,56,87780
chr18:21268010-21268811	chr18	+	21268029	21268813	True	NM_001127717,NM_173505,NM_198129	chr18,chr18,chr18	+,-,+	LAMA3,ANKRD29,LAMA3	748,-25180,748
chr2:208995006-208996417	chr2	+	208995066	208996201	True	NM_020989,NM_006891,NM_001178000	chr2,chr2,chr2	-,-,+	CRYGC,CRYGD,PIKFYVE	-512,-5753,134789
chr10:101088282-101088784	chr10	+	101088439	101088795	True	NM_021828,NM_020348	chr10,chr10	-,+	HPSE2,CNNM1	-92807,60
chr7:54487088-54487731	chr7	+	54487268	54487726	True	NM_182546,NR_004422	chr7,chr7	+,-	VSTM2A,HPVC1	122292,-217154
chr15:59015826-59016298	chr15	+	59015929	59016168	True	NM_001040450,NM_001110	chr15,chr15	+,-	FAM63B,ADAM10	47224,26074
chr1:110280284-110281938	chr1	+	110280387	110281841	True	NM_000851,NR_024537,NM_000849	chr1,chr1,chr1	+,-,-	GSTM5,GSTM3,GSTM3	-25575,1881,1881
chr1:47879294-47880055	chr1	+	47879637	47879947	True	NR_026878,NM_012186	chr1,chr1	-,+	MGC12982,FOXE3	20416,1796
chr19:36483568-36483830	chr19	+	36483672	36483866	True	NM_001039876,NM_001042631	chr19,chr19	-,+	C19orf46,SDHAF1	15856,2223
chr16:1920171-1921311	chr16	+	1920281	1921096	True	NM_152764,NM_001163560,NM_001142398	chr16,chr16,chr16	-,-,+	C16orf73,C16orf73,FAHD1	1063,1140,-43117
chr12:131722412-131723657	chr12	+	131722514	131723618	True	NR_026670,NM_194356	chr12,chr12	+,-	LOC116437,STX2	-73009,-398703
chr12:79944472-79946141	chr12	+	79944593	79946131	True	NR_031700,NM_002583	chr12,chr12	+,-	MIR1252,PAWR	-131614,138715
chr5:758258-758518	chr5	+	758264	758558	True	NM_001166260,NM_007030	chr5,chr5	+,-	TRIP13,TPPP	134410,-64754
chr10:48388385-48388655	chr10	+	48388400	48388704	True	NM_002900,NM_153034	chr10,chr10	-,+	RBP3,ZNF488	2337,-33362
chr20:25774663-25775002	chr20	+	25774716	25775050	True	NR_004846,NR_027061,NR_026714	chr20,chr20,chr20	+,-,-	LOC100134868,FAM182B,FAM182B	215384,1878,6927
chr20:25774663-25775002	chr20	-	26042126	26042460	False	NR_003678,NR_026713	chr20,chr20	-,+	C20orf191,FAM182A	52267,-6927
chr3:52260963-52262528	chr3	+	52261086	52262398	True	NM_017442,NM_144641	chr3,chr3	-,+	TLR9,PPM1M	-907,17410
chr3:192639250-192640814	chr3	+	192639669	192640590	True	NM_020386,NM_178496	chr3,chr3	+,-	HRASLS,MB21D2	318327,-3719
chr11:32455079-32455923	chr11	+	32455150	32455889	True	NM_024426,NM_001198551,NM_024424,NR_023920,NM_000378,NM_001198552	chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,+,-,-	WT1,WT1,WT1,WT1-AS,WT1,WT1	1243,-2787,1243,1395,1243,-2787
chr10:61116181-61118084	chr10	+	61116254	61117820	True	NM_001143773,NM_001143774,NM_198215,NM_001001971,NM_001166698	chr10,chr10,chr10,chr10,chr10	-,+,-,-,-	FAM13C,PHYHIPL,FAM13C,FAM13C,FAM13C	4893,-179078,4584,4584,4584
chr11:64572325-64573120	chr11	+	64572500	64572970	True	NM_004579,NM_006244,NM_130799,NM_000244,NM_130804,NM_130803,NM_130802,NM_130801,NM_130800	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,+,-,-,-,-,-,-,-	MAP4K2,PPP2R5B,MEN1,MEN1,MEN1,MEN1,MEN1,MEN1,MEN1	-1787,119172,5268,5268,5846,5846,5293,5115,5115
chr20:31264058-31264489	chr20	+	31264121	31264473	True	NM_006892,NM_182584	chr20,chr20	+,-	DNMT3B,C20orf203	85717,-24338
chr12:56582189-56582536	chr12	+	56582208	56582510	True	NM_139067,NM_003075,NM_001130420,NM_079423	chr12,chr12,chr12,chr12	-,-,-,+	SMARCC2,SMARCC2,SMARCC2,MYL6	891,891,891,-30217
chr1:182808937-182809300	chr1	+	182808966	182809316	True	NM_030933,NM_001357,NR_033302	chr1,chr1,chr1	-,+,+	SHCBP1L,DHX9,DHX9	113287,-578,-578
chr16:31086777-31087823	chr16	+	31086909	31087533	True	NM_024706,NM_001172668,NM_014699	chr16,chr16,chr16	-,-,+	ZNF668,ZNF668,ZNF646	-1268,-2086,-1217
chr16:46781892-46782758	chr16	+	46781935	46782661	True	NM_182493,NR_037620	chr16,chr16	-,+	MYLK3,ORC6	58,-58428
chr12:131439383-131439595	chr12	+	131439418	131439490	True	NM_194356,NM_198827	chr12,chr12	-,+	STX2,GPR133	-115607,-1029
chr11:120112124-120112336	chr11	+	120112199	120112321	True	NM_014352,NM_012101	chr11,chr11	+,-	POU2F3,TRIM29	-1299,-103336
chr5:150222287-150223735	chr5	+	150222322	150223752	True	NM_001172831,NM_001145805	chr5,chr5	-,+	ZNF300,IRGM	60843,2332
chrX:100077004-100078979	chrX	+	100077143	100079014	True	NM_001325,NM_007052	chrX,chrX	+,-	CSTF2,NOX1	-1847,50370
chr9:139782805-139783359	chr9	+	139782880	139783184	True	NM_153200,NM_021138	chr9,chr9	-,+	EDF1,TRAF2	-22142,-1966
chr15:45150816-45151143	chr15	+	45150926	45151137	True	NM_001145112,NM_152448	chr15,chr15	-,+	PATL2,C15orf43	-181840,97765
chr17:55027599-55028964	chr17	+	55027611	55028937	True	NM_004645,NM_021626	chr17,chr17	-,+	COIL,SCPEP1	9524,26530
chr2:16847905-16848438	chr2	+	16847920	16848300	True	NM_005378,NM_030797	chr2,chr2	+,-	MYCN,FAM49A	-767288,-786
chr17:48421921-48422455	chr17	+	48421949	48422471	True	NM_016504,NM_022167	chr17,chr17	-,+	MRPL27,XYLT2	28141,921
chr20:25775242-25775856	chr20	+	25775332	25775810	True	NR_004846,NR_027061,NR_026714	chr20,chr20,chr20	+,-,-	LOC100134868,FAM182B,FAM182B	214624,1118,6167
chr20:25775242-25775856	chr20	-	26041366	26041844	False	NR_003678,NR_026713	chr20,chr20	-,+	C20orf191,FAM182A	52883,-6167
chr10:51834598-51835820	chr10	+	51835040	51835586	True	NM_018232,NM_001005751,NM_001143974	chr10,chr10,chr10	+,+,-	FAM21B,FAM21A,ASAH2	2299,-7415,172846
chr10:51834598-51835820	chr10	+	46230043	46230145	False	NM_174890,NM_015262,NM_001169106,NM_001169107	chr10,chr10,chr10,chr10	-,+,+,+	ANUBL1,FAM21C,FAM21C,FAM21C	-61792,-7454,-7454,-7454
chr3:28543841-28545475	chr3	+	28543943	28544921	True	NM_001040432,NM_001134433	chr3,chr3	+,-	ZCWPW2,AZI2	-112007,-153325
chr7:75990546-75990882	chr7	+	75990636	75990712	True	NM_012479,NM_007155	chr7,chr7	-,+	YWHAG,ZP3	-2294,36128
chr10:38265743-38266790	chr10	+	38265830	38266758	True	NM_145011,NM_006954	chr10,chr10	-,+	ZNF25,ZNF33A	-377,32819
chr10:43629875-43631758	chr10	+	43629901	43631722	True	NM_018590,NM_145313	chr10,chr10	+,-	CSGALNACT2,RASGEF1A	2211,130695
chr19:533738-534051	chr19	+	533756	534048	True	NM_005317,NM_182577,NM_004359	chr19,chr19,chr19	+,-,+	GZMM,ODF3L2,CDC34	9978,-58773,-2074
chr10:35895064-35895433	chr10	+	35895268	35895491	True	NM_153368,NM_031866	chr10,chr10	+,-	GJD4,FZD8	-986,34931
chr7:5002093-5002667	chr7	+	5002224	5002570	True	NM_198403,NR_015449,NM_001100600	chr7,chr7,chr7	-,+,-	MMD2,RNF216L,MMD2	-3380,11045,-3380
chr6:13322363-13323439	chr6	+	13322544	13323274	True	NM_001143966,NM_001143964,NM_001143965,NM_016495,NM_031244	chr6,chr6,chr6,chr6,chr6	-,-,-,-,+	TBC1D7,TBC1D7,TBC1D7,TBC1D7,SIRT5	5563,5563,5563,5563,251517
chr12:26984352-26985208	chr12	+	26984383	26985222	True	NM_002223,NM_001171888	chr12,chr12	-,+	ITPR2,FGFR1OP2	959,106082
chr3:127662950-127664186	chr3	+	127662980	127663617	True	NM_001003794,NM_207335	chr3,chr3	-,+	MGLL,KBTBD12	-120929,-21138
chr17:67410768-67412268	chr17	+	67410809	67412273	True	NM_172232,NM_002758	chr17,chr17	-,+	ABCA5,MAP2K6	-87486,-22
chr15:89441102-89442222	chr15	+	89441142	89442252	True	NM_178232,NM_013227	chr15,chr15	-,+	HAPLN3,ACAN	-2372,-94519
chr9:100394961-100395162	chr9	+	100394985	100395205	True	NM_139246,NM_002486	chr9,chr9	-,+	TSTD2,NCBP1	807,499
chr13:25743569-25743801	chr13	+	25743664	25743798	True	NM_199138,NM_152704,NM_030979	chr13,chr13,chr13	-,-,+	FAM123A,FAM123A,PABPC3	2109,2109,-73440
chr11:63258121-63258408	chr11	+	63258179	63258268	True	NM_054108,NM_001146729,NM_001146728,NM_001142535	chr11,chr11,chr11,chr11	-,-,-,+	HRASLS5,HRASLS5,HRASLS5,LGALS12	463,463,463,15255
chr1:120836822-120837037	chr1	+	120836872	120837050	True	NM_001004340,NM_001100910	chr1,chr1	-,+	FCGR1B,FAM72B	98944,1954
chr1:120836822-120837037	chr1	-	143915068	143915245	False	NM_207418,NR_034178	chr1,chr1	-,+	FAM72D,SRGAP2P2	-1925,502
chr1:120836822-120837037	chr1	+	206136355	206136531	False	NM_001123168,NM_001007544	chr1,chr1	+,-	FAM72A,C1orf186	2379,152166
chr1:20988761-20989571	chr1	+	20988797	20989287	True	NM_032409,NM_005216	chr1,chr1	+,-	PINK1,DDOST	-28900,-760
chr17:58224274-58224987	chr17	+	58224323	58224971	True	NM_000717,NR_027408	chr17,chr17	+,-	CA4,LOC653653	2330,-44043
chr15:45405378-45406287	chr15	+	45405405	45406205	True	NM_207581,NM_014080	chr15,chr15	+,-	DUOXA2,DUOX2	317,204
chr8:95946227-95946704	chr8	+	95946318	95946604	True	NM_152416,NM_001135733	chr8,chr8	+,-	C8orf38,TP53INP1	90616,15069
chr6:166582041-166582288	chr6	+	166582077	166582267	True	NM_003181,NR_027284	chr6,chr6	-,+	T,LOC441177	-8,-181089
chr3:167452800-167453191	chr3	+	167452816	167452894	True	NM_007217,NM_145859,NM_005025,NM_001122752,NM_145860	chr3,chr3,chr3,chr3,chr3	-,-,+,+,-	PDCD10,PDCD10,SERPINI1,SERPINI1,PDCD10	-222,-165,616,537,-186
chr18:21575688-21576793	chr18	+	21575877	21576792	True	NM_153211,NM_018030	chr18,chr18	+,-	TTC39C,OSBPL1A	-3193,275455
chr10:129845935-129846926	chr10	+	129845985	129846807	True	NM_130435,NM_001145966	chr10,chr10	+,-	PTPRE,MKI67	-223,77717
chr7:87329800-87331179	chr7	+	87329846	87330915	True	NM_138290,NM_000927	chr7,chr7	+,-	RUNDC3B,ABCB1	-72175,11783
chr6:43655555-43656416	chr6	+	43655653	43656425	True	NM_152732,NM_018135,NM_001193343	chr6,chr6,chr6	+,-,-	RSPH9,MRPS18A,MRPS18A	-42937,-104,-104
chr9:74679817-74680935	chr9	+	74679849	74680376	True	NM_004293,NM_001128618	chr9,chr9	+,-	GDA,C9orf57	83916,-4328
chr11:298671-298876	chr11	+	298672	298754	True	NM_006435,NM_001025295,NM_025092	chr11,chr11,chr11	+,-,+	IFITM2,IFITM5,ATHL1	9352,822,-9585
chr20:33682824-33683438	chr20	+	33683126	33683440	True	NM_006404,NM_015638,NM_199368	chr20,chr20,chr20	+,-,-	PROCR,TRPC4AP,TRPC4AP	76333,-2508,-2508
chr4:1897983-1898218	chr4	+	1898068	1898135	True	NM_007331,NM_012318,NM_133330,NM_133331,NM_133334,NM_133335	chr4,chr4,chr4,chr4,chr4,chr4	+,-,+,+,+,+	WHSC1,LETM1,WHSC1,WHSC1,WHSC1,WHSC1	-3617,-40094,-3617,-3617,4217,-3617
chr17:72969147-72969624	chr17	+	72969254	72969610	True	NM_014603,NM_030630	chr17,chr17	+,-	CDR2L,C17orf28	14116,-354
chr10:32345474-32347061	chr10	+	32345661	32346759	True	NM_004521,NM_001026383	chr10,chr10	-,+	KIF5B,CCDC7	-290,388281
chr17:76920468-76921076	chr17	+	76920612	76921075	True	NM_003255,NM_030968	chr17,chr17	-,+	TIMP2,C1QTNF1	447,99175
chr1:25756984-25757184	chr1	+	25757002	25757157	True	NM_020485,NM_018202,NM_138616,NM_138617,NM_138618	chr1,chr1,chr1,chr1,chr1	-,+,-,-,-	RHCE,TMEM57,RHCE,RHCE,RHCE	-9639,230,-9639,-9639,-9639
chr15:60686753-60688575	chr15	+	60687107	60688537	True	NM_012182,NM_001002858,NM_004039,NM_001002857,NM_001136015	chr15,chr15,chr15,chr15,chr15	+,-,-,-,-	FOXB1,ANXA2,ANXA2,ANXA2,ANXA2	-390737,1698,1698,1698,1698
chr14:106383153-106383479	chr14	+	106383173	106383419	True	NR_002224,NR_026800	chr14,chr14	-,+	ADAM6,KIAA0125	54989,418
chr22:30878886-30880320	chr22	+	30879166	30879874	True	NR_001580,NM_016498	chr22,chr22	-,+	SDC4P,MTFP1	-1423,-57606
chr4:142144174-142145449	chr4	+	142144311	142145475	True	NM_020724,NM_014487	chr4,chr4	-,+	RNF150,ZNF330	-89695,-2327
chrX:106341166-106343035	chrX	+	106341427	106343079	True	NM_001169154,NM_001171080	chrX,chrX	+,-	CXorf41,RBM41	106782,19041
chrY:9321291-9321634	chrY	+	9321324	9321386	True	NR_001553,NM_003308	chrY,chrY	-,+	FAM197Y2P,TSPY1	927,-16811
chr20:35806600-35807130	chr20	+	35806731	35806934	True	NM_152503,NM_001135771,NM_213632,NM_002951,NM_213631	chr20,chr20,chr20,chr20,chr20	-,+,-,+,-	C20orf132,RPN2,C20orf132,RPN2,C20orf132	1097,521,1097,521,1097
chr19:35758683-35758909	chr19	+	35758726	35758886	True	NM_003367,NM_207291,NM_152481	chr19,chr19,chr19	+,+,-	USF2,USF2,FAM187B	1009,1009,-39098
chr8:119633192-119633483	chr8	+	119633214	119633488	True	NM_207506,NM_006438,NM_001101676	chr8,chr8,chr8	-,+,-	SAMD12,COLEC10,SAMD12	746,445935,746
chr10:27541034-27541315	chr10	+	27541091	27541357	True	NR_003525,NM_032844	chr10,chr10	-,+	LOC387646,MASTL	2,-97390
chr11:62455847-62456367	chr11	+	62456101	62456335	True	NM_203422,NM_015853,NM_001085372	chr11,chr11,chr11	-,-,+	LRRN4CL,UBXN1,C11orf83	1086,-9574,-17026
chr17:7322050-7322530	chr17	+	7322106	7322566	True	NM_152766,NM_199339,NM_175734	chr17,chr17,chr17	-,+,+	C17orf61,SPEM1,C17orf74	-14656,1112,6368
chr21:46350020-46350810	chr21	+	46350132	46350776	True	NM_058190,NR_027129,NR_027128,NM_000211,NM_001127491	chr21,chr21,chr21,chr21,chr21	+,-,-,-,-	C21orf70,C21orf67,C21orf67,ITGB2,ITGB2	9178,9102,9102,-9167,-1379
chr7:128391702-128392897	chr7	+	128391839	128392618	True	NM_001708,NM_001219	chr7,chr7	-,+	OPN1SW,CALU	23288,-12550
chr19:49616841-49617474	chr19	+	49616986	49617450	True	NM_022165,NM_003660,NM_018111	chr19,chr19,chr19	+,+,-	LIN7B,PPFIA3,C19orf73	167,5212,4997
chr19:10422467-10423078	chr19	+	10422977	10423051	True	NM_001031734,NM_001103167,NM_003259	chr19,chr19,chr19	-,-,+	FDX1L,ZGLP1,ICAM5	3690,-2744,-22373
chr17:7299945-7300481	chr17	+	7300135	7300195	True	NM_152766,NM_020360,NM_020795,NM_001201576,NR_037719	chr17,chr17,chr17,chr17,chr17	-,-,+,-,-	C17orf61,PLSCR3,NLGN2,PLSCR3,C17orf61-PLSCR3	7305,-1973,11306,-1973,7305
chr1:43736389-43736728	chr1	+	43736424	43736776	True	NM_182517,NM_144626	chr1,chr1	-,+	C1orf210,TMEM125	14524,-810
chr9:35078247-35079221	chr9	+	35078437	35079108	True	NM_007126,NM_203299,NM_004629	chr9,chr9,chr9	-,+,-	VCP,C9orf131,FANCG	-5698,-36266,955
chr11:128926366-128926838	chr11	+	128926456	128926858	True	NM_000890,NM_014715	chr11,chr11	+,-	KCNJ5,ARHGAP32	-165208,-32368
chr16:23565489-23566732	chr16	+	23565626	23566440	True	NM_019116,NR_003501,NM_001083614	chr16,chr16,chr16	+,-,-	UBFD1,EARS2,EARS2	2421,2306,2306
chr1:117664719-117665038	chr1	+	117664730	117665086	True	NM_001145635,NR_030640,NM_025188	chr1,chr1,chr1	-,+,-	TRIM45,MIR942,TRIM45	-319,-27516,-319
chr19:43244648-43245476	chr19	+	43244797	43245153	True	NR_036584,NM_021016	chr19,chr19	+,-	LOC100289650,PSG3	80861,-129
chr2:99767644-99768380	chr2	+	99767950	99768260	True	NR_037935,NR_037936,NM_015929,NM_025244,NM_144706,NM_145197,NM_145196,NM_145199,NM_145198,NM_182911,NM_001204830	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,-,+,+,+,+,+,-,+	LIPT1,LIPT1,LIPT1,TSGA10,C2orf15,LIPT1,LIPT1,LIPT1,LIPT1,TSGA10,LIPT1	3276,3157,3157,2985,-9828,3157,3157,3157,3157,-9913,3276
chrX:151607971-151609624	chrX	+	151608106	151609661	True	NM_000808,NM_018558	chrX,chrX	-,+	GABRA3,GABRQ	10220,196975
chr15:65366891-65367380	chr15	+	65367024	65367182	True	NM_001101362,NM_016563	chr15,chr15	+,-	KBTBD13,RASL12	1971,-6636
chr16:75599716-75600214	chr16	+	75599812	75600026	True	NM_001077418,NM_001077419,NM_001077416,NM_007285	chr16,chr16,chr16,chr16	-,-,-,+	TMEM231,TMEM231,TMEM231,GABARAPL2	-9642,-9642,-9676,222
chr6:10887670-10887950	chr6	+	10887674	10887995	True	NM_004752,NM_001040274	chr6,chr6	-,+	GCM2,SYCP2L	-5576,-661
chr11:79698520-79699886	chr11	+	79698652	79699926	True	NM_001098816,NM_020798	chr11,chr11	-,+	ODZ4,USP35	-546957,-1798854
chr1:205911272-205912508	chr1	+	205911321	205912409	True	NM_052934,NM_001123168,NM_134325	chr1,chr1,chr1	-,+,-	SLC26A9,FAM72A,SLC26A9	229,226501,229
chr17:43719544-43720306	chr17_ctg5_hap1	-	1147007	1147759	False	NR_026901,NR_026906,NR_026905	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	+,-,-	LOC644172,C17orf69,C17orf69	40679,3271,3271
chr17:43719544-43720306	chr17	+	43719553	43720305	True	NR_026901,NR_026906,NR_026905	chr17,chr17,chr17	-,+,+	LOC644172,C17orf69,C17orf69	-39805,-3271,-3271
chr2:8980610-8981996	chr2	+	8980736	8981939	True	NM_020738,NM_002166	chr2,chr2	-,+	KIDINS220,ID2	-2981,-158674
chr2:113522544-113523154	chr2	+	113522661	113523149	True	NM_152515,NM_005415	chr2,chr2	-,+	CKAP2L,SLC20A1	-407,-119279
chr19:58896251-58897437	chr19	+	58896344	58897486	True	NM_138466,NM_001009,NM_001195135,NM_001129730	chr19,chr19,chr19,chr19	-,+,+,-	ZNF837,RPS5,LOC646862,ZNF837	-3955,1149,9970,-3955
chrX:100605728-100606871	chrX	+	100605800	100606728	True	NM_001145951,NM_021029,NM_004085	chrX,chrX,chrX	-,+,-	TIMM8A,RPL36A,TIMM8A	-2092,39149,-1843
chr2:172753973-172755957	chr2	+	172754150	172755343	True	NM_003705,NM_003642	chr2,chr2	-,+	SLC25A12,HAT1	-3337,23591
chr4:26491204-26491941	chr4	+	26491218	26491894	True	NM_000730,NM_018317	chr4,chr4	-,+	CCKAR,TBC1D19	198,93651
chr12:7944978-7945667	chr12	+	7945287	7945442	True	NM_024865,NM_203503	chr12,chr12	+,-	NANOG,CLEC4C	-3344,-43218
chr4:159700812-159702041	chr4	+	159701230	159701914	True	NM_005038,NM_020840	chr4,chr4	-,+	PPID,FNIP2	-56678,-11099
chr11:62066154-62066604	chr11	+	62066258	62066560	True	NM_002411,NM_206998	chr11,chr11	+,-	SCGB2A2,SCGB1D4	-28685,26
chrX:134970687-134970893	chrX	+	134970687	134970933	True	NM_001017438,NM_018666	chrX,chrX	-,+	CT45A6,SAGE1	361,4851
chrX:134970687-134970893	chrX	+	134936178	134936424	False	NM_018666,NM_001017436	chrX,chrX	+,-	SAGE1,CT45A4	39360,361
chrX:134970687-134970893	chrX	+	134953437	134953683	False	NM_001007551,NM_018666,NM_001172288	chrX,chrX,chrX	-,+,-	CT45A5,SAGE1,CT45A5	361,22101,361
chrX:134970687-134970893	chrX	-	134866524	134866770	False	NM_152582,NM_001017436	chrX,chrX	+,+	CT45A2,CT45A4	-361,-361
chrX:134970687-134970893	chrX	-	134883798	134884044	False	NM_001017436,NM_001017435	chrX,chrX	-,+	CT45A4,CT45A3	52741,-361
chr2:74117910-74118316	chr2	+	74117993	74118299	True	NM_001199893,NM_001615,NM_003584	chr2,chr2,chr2	+,+,-	ACTG2,ACTG2,DUSP11	1793,1793,-110709
chr2:26572333-26572732	chr2	+	26572553	26572707	True	NM_033505,NM_153835	chr2,chr2	+,-	EPT1,GPR113	-3659,-2868
chr3:85770814-85772729	chr3	+	85771003	85772754	True	NR_033860,NM_153184	chr3,chr3	-,+	LOC440970,CADM2	-852277,2877
chr1:216543187-216543624	chr1	+	216543307	216543432	True	NM_206933,NM_016121	chr1,chr1	-,+	USH2A,KCTD3	53362,-802626
chr6:46889733-46890632	chr6	+	46889888	46890664	True	NM_001098518,NM_005588	chr6,chr6	-,+	GPR116,MEP1A	-174,-128853
chr3:128209029-128209250	chr3	+	128209071	128209267	True	NM_001145662,NM_001145661,NR_026954,NM_032638	chr3,chr3,chr3,chr3	-,-,+,-	GATA2,GATA2,LOC90246,GATA2	-2307,-1698,17410,2813
chr3:171529916-171531438	chr3	+	171530153	171531479	True	NM_001130081,NM_002662,NM_001164436	chr3,chr3,chr3	-,-,+	PLD1,PLD1,TMEM212	-1880,-1880,29659
chr12:93962485-93962688	chr12	+	93962488	93962644	True	NM_003877,NM_003348	chr12,chr12	+,-	SOCS2,UBE2N	953,-126462
chr21:43813275-43813527	chr21	+	43813404	43813573	True	NM_024022,NM_032405,NM_001001895,NR_027348	chr21,chr21,chr21,chr21	-,-,+,-	TMPRSS3,TMPRSS3,UBASH3A,TMPRSS3	2682,2682,10445,-4151
chr1:85145245-85146003	chr1	+	85145245	85145895	True	NM_001166295,NR_036561	chr1,chr1	-,+	SSX2IP,SPATA1	10306,-173324
chr19:43970079-43970677	chr19	+	43970155	43970675	True	NM_001130011,NM_014400	chr19,chr19	+,-	TEX101,LYPD3	-51180,-324
chr19:49520448-49520923	chr19	+	49520518	49520760	True	NM_000894,NM_000737,NM_033378	chr19,chr19,chr19	-,-,+	LHB,CGB,CGB2	-171,6883,14369
chr22:19119313-19119838	chr22	+	19119314	19119714	True	NM_053006,NM_005137,NM_001173533,NM_001184781,NM_001173534,NR_033674	chr22,chr22,chr22,chr22,chr22,chr22	+,-,-,-,-,-	TSSK2,DGCR2,DGCR2,DGCR2,DGCR2,DGCR2	-1044,-9347,-9347,-9347,-9347,-9347
chr6:117152403-117153242	chr6	+	117152535	117153193	True	NM_148963,NM_173560	chr6,chr6	-,+	GPRC6A,RFX6	-2337,45182
chr19:1649138-1649966	chr19	+	1649145	1649895	True	NM_003200,NM_001136139,NM_001080488	chr19,chr19,chr19	-,-,+	TCF3,TCF3,ONECUT3	2481,441,103766
chr1:169706176-169707650	chr1	+	169706240	169707682	True	NM_000450,NM_018186	chr1,chr1	-,+	SELE,C1orf112	-3020,56867
chr19:59022289-59022653	chr19	+	59022319	59022542	True	NM_012254,NM_032792,NM_005762	chr19,chr19,chr19	-,-,+	SLC27A5,ZBTB45,TRIM28	943,8432,33293
chr16:31713654-31714566	chr16	+	31713693	31714531	True	NR_027011,NR_024034	chr16,chr16	-,+	CSDAP1,KIAA0664L3	-132848,-1810
chr22:44895426-44895959	chr22	+	44895923	44895997	True	NR_028409,NM_032287	chr22,chr22	+,-	NCRNA00207,LDOC1L	69222,-1918
chr17:12692083-12692758	chr17	+	12692276	12692668	True	NM_014859,NM_001165962	chr17,chr17	+,-	ARHGAP44,ELAC2	160,228764
chr17:20369479-20370405	chr17	+	20369643	20370423	True	NM_001190790,NM_001042685	chr17,chr17	+,-	CDRT15L2,LGALS9B	112613,475
chr17:20369479-20370405	chr17	+	20601786	20601836	False	NM_001190790,NR_029393	chr17,chr17	+,-	CDRT15L2,KRT16P3	-118800,-193975
chr17:20369479-20370405	chr17	-	18380528	18381308	False	NR_003554,NM_001040078	chr17,chr17	-,+	LOC220594,LGALS9C	43308,-480
chr22:41491524-41492916	chr22	+	41491563	41492575	True	NM_138481,NM_001429,NR_031694	chr22,chr22,chr22	-,+,+	CHADL,EP300,MIR1281	144419,-3012,-3109
chrX:101411328-101411640	chrX	+	101411343	101411611	True	NM_001012978,NM_001159560,NM_080390	chrX,chrX,chrX	-,-,+	BEX5,BEX5,TCEAL2	-357,-581,-30734
chr15:83318468-83320238	chr15	+	83318506	83319400	True	NM_030594,NR_003011	chr15,chr15	-,+	CPEB1,SCARNA15	-1778,105296
chr16:30598195-30598449	chr16	+	30598196	30598399	True	NM_152458,NM_024031	chr16,chr16	-,+	ZNF785,PRR14	-1104,63841
chr19:4902667-4902892	chr19	+	4902780	4902934	True	NM_001080523,NM_001048201,NM_013282	chr19,chr19,chr19	-,+,+	ARRDC5,UHRF1,UHRF1	-5,6575,7631
chr1:28918606-28918907	chr1	+	28918701	28918887	True	NM_152304,NR_024127,NM_001193532	chr1,chr1,chr1	+,-,+	RAB42,SNHG12,RAB42	-40,-10335,119
chr17:35304775-35305158	chr17	+	35304774	35305064	True	NM_012138,NM_198837	chr17,chr17	+,-	AATF,ACACA	1110,351678
chr8:80993477-80994201	chr8	+	80993491	80993873	True	NM_001025252,NM_001105539	chr8,chr8	-,+	TPD52,ZBTB10	-481,404574
chr3:52488068-52488850	chr3	+	52488306	52488848	True	NM_003280,NM_020163,NM_007184	chr3,chr3,chr3	-,-,+	TNNC1,SEMA3G,NISCH	-249,-9263,675
chr8:27092921-27094080	chr8	+	27093153	27094113	True	NM_173174,NM_030795	chr8,chr8	+,-	PTK2B,STMN4	74885,21840
chr1:161124365-161126183	chr1	+	161124645	161125807	True	NM_032998,NM_001199873,NM_012475,NM_001014443,NM_016406	chr1,chr1,chr1,chr1,chr1	-,-,+,+,+	DEDD,B4GALT3,USP21,USP21,UFC1	-22167,22001,3446,3446,-1163
chr19:9949289-9950784	chr19	+	9949654	9950751	True	NM_006221,NM_017703	chr19,chr19	+,-	PIN1,FBXL12	-3706,-19923
chr4:114038150-114039072	chr4	+	114038204	114039112	True	NR_031641,NR_029857	chr4,chr4	+,-	MIR1243,MIR302B	-10236,-468491
chr2:152146727-152146942	chr2	+	152146746	152146932	True	NM_004688,NM_007115	chr2,chr2	-,+	NMI,TNFAIP6	-316,67173
chr18:9358672-9359983	chr18	+	9358719	9359987	True	NM_020648,NM_001042388	chr18,chr18	+,-	TWSG1,PPP4R1	-24006,254663
chr18:77867850-77868731	chr18	+	77867884	77868669	True	NM_014913,NM_006701	chr18,chr18	+,-	ADNP2,TXNL4A	-1020,-119352
chr11:76841024-76841260	chr11	+	76841240	76841304	True	NM_182833,NM_001127180,NM_000260,NM_001127179	chr11,chr11,chr11,chr11	-,+,+,+	GDPD4,MYO7A,MYO7A,MYO7A	157209,-1975,-1981,-1981
chr21:26732602-26734223	chr21	+	26732815	26733859	True	NR_024027,NR_001458	chr21,chr21	-,+	NCRNA00158,MIR155HG	70218,200597
chr2:177050433-177050914	chr2	+	177050575	177050950	True	NM_024501,NR_033979	chr2,chr2	+,-	HOXD1,LOC401022	2356,2786
chr1:228753818-228754082	chr1	+	228753817	228753889	True	NR_037962,NM_033445	chr1,chr1	+,-	RHOU,HIST3H2A	26504,-108257
chr1:228753818-228754082	chr1	+	228762733	228762805	False	NR_037962,NM_033445	chr1,chr1	+,-	RHOU,HIST3H2A	17588,-117173
chr6:49486508-49486812	chr6	+	49486669	49486802	True	NM_000255,NM_001010904	chr6,chr6	-,+	MUT,GLYATL3	-55628,-19057
chr22:31556415-31556633	chr22	+	31556431	31556629	True	NR_024209,NR_037496,NM_001135825,NR_024211,NR_024210,NR_024212,NM_152267	chr22,chr22,chr22,chr22,chr22,chr22,chr22	+,-,+,+,+,+,+	RNF185,MIR3928,RNF185,RNF185,RNF185,RNF185,RNF185	-344,-326,-344,-344,-344,-344,-344
chr19:46196186-46196491	chr19	+	46196221	46196519	True	NM_177542,NM_001163377,NM_017659,NM_004597	chr19,chr19,chr19,chr19	-,+,+,-	SNRPD2,QPCTL,QPCTL,SNRPD2	-778,-531,-531,-778
chr2:170413216-170414938	chr2	+	170413692	170414719	True	NM_004792,NM_024622	chr2,chr2	+,-	PPIG,FASTKD1	26130,15761
chr1:230882171-230883166	chr1	+	230882309	230883197	True	NM_016452,NM_000029,NM_006615	chr1,chr1,chr1	+,-,+	CAPN9,AGT,CAPN9	-37,-31973,-68
chr4:80941394-80942157	chr4	+	80941624	80942044	True	NM_020226,NM_058172	chr4,chr4	+,-	PRDM8,ANTXR2	164379,52489
chr6:126275963-126277927	chr6	+	126276372	126277768	True	NM_016063,NM_138571	chr6,chr6	-,+	HDDC2,HINT3	-653090,92
chr7:153999061-153999653	chr7	+	153999146	153999584	True	NM_001936,NM_007349	chr7,chr7	+,-	DPP6,PAXIP1	2762,795148
chr5:44337965-44338555	chr5	+	44338488	44338602	True	NM_004465,NM_016640	chr5,chr5	-,+	FGF10,MRPS30	50234,470424
chr11:82614239-82615370	chr11	+	82614239	82615122	True	NM_005040,NM_145018,NM_199418	chr11,chr11,chr11	-,+,-	PRCP,C11orf82,PRCP	-2682,-1553,-2682
chr1:9144629-9145032	chr1	+	9144645	9144989	True	NM_001215,NR_024180	chr1,chr1	+,-	CA6,SLC2A5	-138774,3571
chr19:7047677-7048852	chr19	+	7047730	7048497	True	NM_001164419,NM_144614	chr19,chr19	-,+	MBD3L4,MBD3L2	-7546,853
chr19:7047677-7048852	chr19	-	7022293	7023060	False	NR_024372,NM_001136507	chr19,chr19	-,+	FLJ25758,MBD3L5	-15867,7533
chrY:1461927-1462402	chrY	+	1461967	1462321	True	NM_001636,NR_026710,NR_026711	chrY,chrY,chrY	-,+,+	SLC25A6,ASMTL-AS1,ASMTL-AS1	-928,7102,7102
chrY:1461927-1462402	chrX	+	1511967	1512321	False	NM_001636,NR_026710,NR_026711	chrX,chrX,chrX	-,+,+	SLC25A6,ASMTL-AS1,ASMTL-AS1	-928,7102,7102
chr20:10413841-10414506	chr20	+	10413977	10414265	True	NM_170784,NM_001009608,NM_018848	chr20,chr20,chr20	-,+,-	MKKS,C20orf94,MKKS	651,1685,-1407
chr15:22835140-22835579	chr15	+	22835220	22835626	True	NR_027407,NM_001102610,NM_052903	chr15,chr15,chr15	-,+,+	GOLGA8DP,TUBGCP5,TUBGCP5	-119492,-1884,-1884
chr1:101005708-101005983	chr1	+	101005862	101005992	True	NM_022049,NM_001918	chr1,chr1	+,-	GPR88,DBT	-2185,-290453
chr12:76469990-76471483	chr12	+	76470098	76471490	True	NM_004537,NM_139207,NM_006851	chr12,chr12,chr12	-,-,+	NAP1L1,NAP1L1,GLIPR1	7306,7306,-595650
chr4:11372989-11373771	chr4	+	11372988	11373798	True	NR_030298,NM_005114	chr4,chr4	+,-	MIR572,HS3ST1	-2595,56789
chr4:11372989-11373771	chr16	-	2316349	2316607	False	NR_037448,NM_080594,NM_006711,NR_030636	chr16,chr16,chr16,chr16	+,-,-,+	MIR3677,RNPS1,RNPS1,MIR940	4106,1863,1308,5140
chr16:5125116-5125616	chr16	+	5125259	5125641	True	NM_001098514,NM_019109,NM_152459	chr16,chr16,chr16	-,+,-	C16orf89,ALG1,C16orf89	-9148,-3515,-9148
chr9:38416041-38416663	chr9	+	38416054	38416571	True	NM_001007563,NM_000692	chr9,chr9	-,+	IGFBPL1,ALDH1B1	7929,-23403
chr16:23605360-23605832	chr16	+	23605506	23605700	True	NM_019116,NM_005003	chr16,chr16	+,-	UBFD1,NDUFAB1	-36696,1989
chr17:78387823-78388034	chr17	+	78387823	78388015	True	NM_001164637,NR_029376,NM_001164638,NM_173627	chr17,chr17,chr17,chr17	+,-,+,+	FLJ35220,LOC100294362,FLJ35220,FLJ35220	951,1004,951,951
chr11:14380823-14381413	chr11	+	14380915	14381335	True	NM_000922,NM_001102669,NM_012250,NM_001177314,NM_001177315	chr11,chr11,chr11,chr11,chr11	+,-,-,-,-	PDE3B,RRAS2,RRAS2,RRAS2,RRAS2	283933,-842,-185,4767,-884
chr7:150864169-150864393	chr7	+	150864284	150864362	True	NM_001098834,NM_019015	chr7,chr7	-,+	GBX1,CHPF2	555,65222
chr18:60381287-60382383	chr18	+	60381577	60382371	True	NM_194449,NM_176787	chr18,chr18	+,-	PHLPP1,PIGN	300,-527288
chr12:124156671-124157519	chr12	+	124156725	124156993	True	NM_001414,NM_024809,NM_001143850	chr12,chr12,chr12	-,+,+	EIF2B1,TCTN2,TCTN2	-38402,-1116,-1116
chr1:117208929-117209194	chr1	+	117208989	117209225	True	NR_031564,NM_001007237,NM_001542	chr1,chr1,chr1	+,-,-	MIR320B1,IGSF3,IGSF3	5145,1139,1139
chr15:63344644-63344881	chr15	+	63344742	63344894	True	NM_001018006,NM_001018007,NM_001018004,NM_001018005,NM_001018008,NM_000366,NM_001018020,NM_015920	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,-	TPM1,TPM1,TPM1,TPM1,TPM1,TPM1,TPM1,RPS27L	-9965,-9965,-9965,-9965,-4167,-9965,-9965,104897
chr11:65361887-65362195	chr11	+	65361969	65362069	True	NM_001099409,NM_033347,NM_005714,NM_033348,NM_033455	chr11,chr11,chr11,chr11,chr11	+,-,-,-,-	EHBP1L1,KCNK7,KCNK7,KCNK7,KCNK7	-18511,1450,1450,1450,1450
chr10:124614544-124614966	chr10	+	124614685	124614960	True	NR_037912,NR_027282,NM_022034	chr10,chr10,chr10	-,+,-	CUZD1,LOC399815,CUZD1	-8994,24188,-8994
chr17:21280914-21281410	chr17	+	21281021	21281443	True	NM_152914,NM_021012	chr17,chr17	-,+	C17orf103,KCNJ12	-124443,-1373
chr16:62069688-62070077	chr16	+	62069762	62069952	True	NM_001796,NM_024860	chr16,chr16	-,+	CDH8,SETD6	837,-3520430
chr1:183548581-183549832	chr1	+	183549058	183549832	True	NM_000433,NM_001190789,NM_001190794,NM_015149	chr1,chr1,chr1,chr1	-,-,-,+	NCF2,NCF2,NCF2,RGL1	9957,9957,9957,55375
chr12:49687611-49688940	chr12	+	49687681	49688693	True	NM_001008223,NM_006262	chr12,chr12	-,+	C1QL4,PRPH	42328,215
chr1:66483954-66485383	chr1	+	66484275	66485410	True	NM_005478,NM_001037340	chr1,chr1	-,+	INSL5,PDE4B	781582,-25948
chr9:100173524-100174115	chr9	+	100173548	100174020	True	NR_026847,NM_014290	chr9,chr9	-,+	LOC286359,TDRD7	-14575,281
chr1:153234290-153234502	chr1	+	153234415	153234541	True	NM_052891,NM_000427	chr1,chr1	-,+	PGLYRP3,LOR	48703,-2287
chr12:133758597-133759587	chr12	+	133758636	133759368	True	NM_001191054,NM_152943,NM_003415,NM_001165885,NM_001165884,NM_001165887,NM_001165886,NM_001165881,NM_001165883	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,+,+,+,+,+,+	LOC647589,ZNF268,ZNF268,ZNF268,ZNF268,ZNF268,ZNF268,ZNF268,ZNF268	53106,-692,-692,-692,-692,-692,-692,-627,-692
chr19:49054545-49055196	chr19	+	49054596	49055154	True	NM_177973,NM_001080434	chr19,chr19	+,-	SULT2B1,LMTK3	274,-38150
chr6:170152175-170152520	chr6	+	170152306	170152546	True	NM_018341,NM_174910	chr6,chr6	+,-	C6orf70,TCTE3	-646,-668
chr6:6681552-6683238	chr6	+	6681836	6683006	True	NM_004271,NR_026970	chr6,chr6	+,-	LY86,LY86-AS1	-92953,-58777
chr10:64132275-64133672	chr10	+	64132521	64133697	True	NM_145307,NM_199451,NM_014951,NM_199450	chr10,chr10,chr10,chr10	-,+,+,+	RTKN2,ZNF365,ZNF365,ZNF365	-104055,218,218,218
chr20:62205595-62205874	chr20	+	62205685	62205918	True	NM_033405,NM_024059,NM_001037335	chr20,chr20,chr20	-,+,-	PRIC285,C20orf195,PRIC285	-6578,-21363,-93
chr7:128693471-128693984	chr7	+	128693627	128694036	True	NM_001191028,NM_012470,NR_002187,NR_034053	chr7,chr7,chr7,chr7	-,-,+,-	TNPO3,TNPO3,TPI1P2,TNPO3	1255,1255,1240,1255
chr2:224806247-224807291	chr2	+	224806316	224806911	True	NM_020830,NM_022915	chr2,chr2	-,+	WDFY1,MRPL44	3204,15209
chr19:49437081-49437908	chr19	+	49437133	49437947	True	NM_003323,NM_014475	chr19,chr19	-,+	TULP2,DHDH	-35137,-245
chr11:64546080-64546430	chr11	+	64546088	64546472	True	NM_001178030,NM_001178031,NM_004630,NM_201997,NM_006244,NM_201995,NR_033649,NM_201998,NR_033650	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,+,-,-,-,-	SF1,SF1,SF1,SF1,PPP2R5B,SF1,SF1,SF1,SF1	-150,-856,-20,-20,145670,-20,-20,-20,-20
chr2:190650098-190650705	chr2	+	190650133	190650512	True	NM_001128143,NM_016467,NM_001128144,NM_001128150,NM_000534	chr2,chr2,chr2,chr2,chr2	+,-,+,-,+	PMS1,ORMDL1,PMS1,ORMDL1,PMS1	-1373,-1036,-1373,-1036,-1373
chrX:73076894-73078503	chrX	+	73076980	73077890	True	NR_001564,NR_003255	chrX,chrX	-,+	XIST,TSIX	-4392,-64997
chr11:62315465-62316746	chr11	+	62315582	62316732	True	NM_001620,NM_000327,NM_024060	chr11,chr11,chr11	-,+,-	AHNAK,ROM1,AHNAK	-1250,63480,-1250
chr10:88728579-88729220	chr10	+	88728673	88729243	True	NM_024756,NM_133447,NM_006829	chr10,chr10,chr10	-,+,+	MMRN2,AGAP11,C10orf116	-11248,1254,-536
chr19:11096195-11096597	chr19	+	11096407	11096645	True	NM_001128846,NM_001128847,NM_024029,NM_001128845,NM_001128848	chr19,chr19,chr19,chr19,chr19	+,+,-,+,+	SMARCA4,SMARCA4,YIPF2,SMARCA4,SMARCA4	-1630,-1630,-57050,-1630,-1630
chr5:150636949-150637397	chr5	+	150636983	150637415	True	NM_000405,NM_015621,NM_001167607	chr5,chr5,chr5	+,-,+	GM2A,CCDC69,GM2A	-4421,-33329,-4421
chr19:14494536-14495125	chr19	+	14494700	14495064	True	NM_078481,NM_001025160,NM_001204057,NM_001784	chr19,chr19,chr19,chr19	+,+,-,+	CD97,CD97,DDX39A,CD97	-2538,-2538,34892,-2538
chr13:45490403-45490632	chr13	+	45490501	45490587	True	NM_012345,NM_018559	chr13,chr13	-,+	NUFIP1,KIAA1704	73076,73099
chr2:106043975-106045177	chr2	+	106044015	106044979	True	NM_024093,NM_201557	chr2,chr2	+,-	C2orf49,FHL2	-90053,10301
chr17:4836276-4837075	chr17	+	4836463	4836976	True	NM_000173,NM_001165417,NM_015528,NM_003562,NM_001165418	chr17,chr17,chr17,chr17,chr17	+,-,+,-,-	GP1BA,SLC25A11,RNF167,SLC25A11,SLC25A11	-922,6536,6653,6536,6536
chr1:235816831-235817997	chr1	+	235817154	235818017	True	NM_003193,NM_004485,NM_001098721,NM_001098722	chr1,chr1,chr1,chr1	+,-,-,-	TBCE,GNG4,GNG4,GNG4	-286490,-3100,-3100,-3861
chr3:50389064-50389456	chr3	+	50389085	50389493	True	NM_015896,NM_007022,NM_007024,NM_006545	chr3,chr3,chr3,chr3	-,+,-,-	ZMYND10,CYB561D2,TMEM115,NPRL2	-5929,-839,7496,-599
chr3:109130271-109132093	chr3	+	109130663	109132088	True	NM_018189,NM_001145553	chr3,chr3	-,+	DPPA4,FLJ25363	-74244,-1889
chr13:95120441-95121250	chr13	+	95120442	95121250	True	NM_180989,NM_001129889	chr13,chr13	+,-	GPR180,DCT	132853,10736
chr6:36241316-36241608	chr6	+	36241325	36241650	True	NM_001145717,NM_001010903	chr6,chr6	+,-	PNPLA1,C6orf222	-3147,63062
chr16:854798-855186	chr16	+	854893	855157	True	NM_001013638,NM_016541	chr16,chr16	+,-	PRR25,GNG13	285,-4160
chr2:234264362-234265678	chr2	+	234264486	234265461	True	NM_018218,NM_152879	chr2,chr2	-,+	USP40,DGKD	208832,-1392
chr20:6032234-6032687	chr20	+	6032233	6032667	True	NM_001127458,NM_152611	chr20,chr20	+,-	CRLS1,LRRN4	-44386,2077
chr15:68117152-68117549	chr15	+	68117217	68117489	True	NM_001031807,NM_001031733	chr15,chr15	+,-	SKOR1,CALML4	451,381009
chrX:103026032-103026790	chrX	+	103026435	103026811	True	NM_000533,NM_001172285,NM_001128834,NM_199478	chrX,chrX,chrX,chrX	+,-,+,+	PLP1,GLRA4,PLP1,PLP1	4942,-42883,4627,4942
chr12:54409914-54410446	chr12	+	54410055	54410339	True	NM_014620,NR_003716,NM_022658,NM_153693,NR_003084	chr12,chr12,chr12,chr12,chr12	+,-,+,+,+	HOXC4,HOTAIR,HOXC8,HOXC6,HOXC5	302,-47540,-7216,302,302
chr1:160340724-160340944	chr1	+	160340738	160340936	True	NM_004371,NM_005598	chr1,chr1	-,+	COPA,NHLH1	-27384,-3928
chr13:114539972-114540810	chr13	+	114540001	114540753	True	NM_001143945,NM_001143946,NR_024609	chr13,chr13,chr13	-,-,+	GAS6,GAS6,FLJ44054	-984,-3287,45856
chr3:10157566-10157843	chr3	+	10157573	10157777	True	NM_173472,NM_018462,NM_001164839	chr3,chr3,chr3	-,+,-	C3orf24,C3orf10,C3orf24	-7658,-291,-7658
chr19:22188650-22190041	chr19	+	22188711	22189916	True	NM_007153,NM_033468	chr19,chr19	-,+	ZNF208,ZNF257	3887,45349
chr19:22188650-22190041	chr19	+	22393614	22393664	False	NM_001001411,NM_033468	chr19,chr19	-,+	ZNF676,ZNF257	-13861,-158399
chr6:161123908-161124959	chr6	+	161123942	161124931	True	NM_000301,NM_001168338,NM_005577	chr6,chr6,chr6	+,+,-	PLG,PLG,LPA	-777,-777,-36535
chr11:112135931-112136943	chr11	+	112135934	112136744	True	NM_000317,NM_001145024	chr11,chr11	+,-	PTS,C11orf34	-38897,-4351
chr9:92095749-92096538	chr9	+	92095907	92096535	True	NM_006378,NM_006705,NM_001142287	chr9,chr9,chr9	-,+,-	SEMA4D,GADD45G,SEMA4D	-1296,123391,-1296
chr3:139662545-139663778	chr3	+	139662553	139663754	True	NM_022131,NM_178177	chr3,chr3	+,-	CLSTN2,NMNAT3	-8577,-265668
chr11:55868435-55869800	chr11	+	55868434	55868573	True	NM_001003750,NM_001004064,NM_001005200	chr11,chr11,chr11	+,-,+	OR8I2,OR8J3,OR8H2	-7705,36682,3945
chr9:14884081-14885013	chr9	+	14884278	14884858	True	NR_003920,NM_144966	chr9,chr9	+,-	LOC389705,FREM1	108466,26185
chr17:73508547-73508903	chr17	+	73508547	73508719	True	NM_207346,NM_020753,NM_001142643	chr17,chr17,chr17	+,-,-	TSEN54,CASKIN2,CASKIN2	3889,2958,-2589
chr5:172089521-172089731	chr5	+	172089572	172089760	True	NM_001142651,NM_004417	chr5,chr5	+,-	NEURL1B,DUSP1	-21347,108493
chr16:71608406-71609672	chr16	+	71608624	71609703	True	NM_000353,NM_001166395	chr16,chr16	-,+	TAT,CHST4	1345,-48535
chr22:37581723-37581966	chr22	+	37581784	37582000	True	NM_013385,NM_182486,NM_031910	chr22,chr22,chr22	+,-,-	CYTH4,C1QTNF6,C1QTNF6	96494,2380,2380
chr10:103606572-103607350	chr10	+	103606726	103607392	True	NM_024747,NM_173195,NM_173191,NM_173192,NM_173193,NM_173194,NM_014591,NM_173197	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,-,-,-,-,-,-,-	HPS6,KCNIP2,KCNIP2,KCNIP2,KCNIP2,KCNIP2,KCNIP2,KCNIP2	217731,-3049,-3049,-3049,-3049,-7115,-3049,-3049
chr2:172288502-172289787	chr2	+	172288508	172289652	True	NR_028482,NM_024770,NM_001164821,NM_025000	chr2,chr2,chr2,chr2	+,-,+,+	DCAF17,METTL8,DCAF17,DCAF17	1108,1710,1108,1108
chr1:44588428-44590256	chr1	+	44588712	44589718	True	NM_001024845,NM_173484	chr1,chr1	-,+	SLC6A9,KLF17	-91578,-4253
chr7:3341616-3341889	chr7	+	3341770	3341936	True	NM_152744,NM_032415	chr7,chr7	+,-	SDK1,CARD11	-741,-258261
chr1:55271293-55271682	chr1	+	55271448	55271684	True	NM_017904,NM_001114108,NM_152607,NM_001110533	chr1,chr1,chr1,chr1	-,-,+,+	TTC22,TTC22,C1orf177,C1orf177	-4507,-4507,51,51
chr8:110986381-110986666	chr8	+	110986413	110986657	True	NM_014379,NM_004215	chr8,chr8	-,+	KCNV1,EBAG9	352,-434154
chr11:113640365-113640901	chr11	+	113640393	113640762	True	NM_001101389,NM_004724	chr11,chr11	+,-	CLDN25,ZW10	9755,3718
chr3:195343983-195344767	chr3	+	195344005	195344805	True	NM_001647,NR_003265	chr3,chr3	-,+	APOD,SDHAP2	-32929,40104
chr3:195343983-195344767	chr3	+	195450182	195450573	False	NM_001098516,NM_004532,NM_152673	chr3,chr3,chr3	+,-,+	MUC20,MUC4,MUC20	524,88625,-2480
chr13:114463182-114464171	chr13	+	114463229	114464125	True	NM_182614,NR_028064	chr13,chr13	+,-	FAM70B,LOC100130386	-1074,-9167
chrY:23982459-23982785	chrY	+	23982526	23982804	True	NM_001006120,NM_001006118	chrY,chrY	+,-	RBMY1D,RBMY1E	-285772,57879
chr18:77158788-77159294	chr18	+	77159092	77159268	True	NM_006162,NM_172388,NM_172389,NM_172387,NM_001146343,NM_172390	chr18,chr18,chr18,chr18,chr18,chr18	+,+,+,+,-,+	NFATC1,NFATC1,NFATC1,NFATC1,PQLC1,NFATC1	-3373,-3373,1057,1057,552437,-3373
chr19:4969809-4970461	chr19	+	4969909	4970510	True	NM_015015,NM_001080523	chr19,chr19	+,-	KDM4B,ARRDC5	-836,-67030
chr19:58009945-58011239	chr19	+	58010295	58011241	True	NM_001144068,NM_198542	chr19,chr19	-,+	ZNF772,ZNF773	-21357,67
chr12:48578002-48578256	chr12	+	48578022	48578190	True	NM_001013635,NM_001004134	chr12,chr12	+,-	C12orf68,OR10AD1	-707,18935
chr13:25878965-25879596	chr13	+	25879004	25879640	True	NM_001008564,NM_004685,NM_014089	chr13,chr13,chr13	+,-,+	NUPL1,MTMR6,NUPL1	-3399,-17300,-3399
chr15:22711776-22712679	chr15	+	22712150	22712458	True	NR_027407,NM_001001413	chr15,chr15	-,+	GOLGA8DP,GOLGA6L1	3320,23787
chr15:22711776-22712679	chr15	+	28774568	28774647	False	NR_036443,NR_033351,NR_033353	chr15,chr15,chr15	+,-,-	HERC2P9,GOLGA8F,GOLGA8G	124940,3549,3549
chr15:22711776-22712679	chr15	-	28627279	28627358	False	NM_004667,NR_033351,NR_033353	chr15,chr15,chr15	-,+,+	HERC2,GOLGA8F,GOLGA8G	-59984,-3553,-3553
chr15:22711776-22712679	chr15	-	23438339	23438629	False	NR_002824,NR_033350	chr15,chr15	-,+	HERC2P2,GOLGA8E	-60080,-3320
chr15:22711776-22712679	chr15	-	20770941	20771249	False	NM_001145004,NR_027411	chr15,chr15	-,+	GOLGA6L6,GOLGA8C	-23827,-3318
chr6:14988206-14989927	chr6	+	14988234	14989938	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	256588,673401
chr16:9180558-9181500	chr16	+	9181126	9181214	True	NM_003470,NM_014117	chr16,chr16	-,+	USP7,C16orf72	-123785,4322
chr16:64234020-64235922	chr16	+	64234059	64235874	True	NM_001795,NM_001797	chr16,chr16	+,-	CDH5,CDH11	2164650,920099
chr14:54908410-54909787	chr14	+	54908523	54909464	True	NM_005776,NM_005192	chr14,chr14	-,+	CNIH,CDKN3	-375,-44901
chr17:1396857-1397135	chr17	+	1396864	1396950	True	NM_001080779,NM_001080950,NR_028514,NM_033375	chr17,chr17,chr17,chr17	-,-,+,-	MYO1C,MYO1C,LOC100306951,MYO1C	-863,-7813,23262,-1892
chr6:44226902-44227875	chr6	+	44226953	44227614	True	NM_001137560,NM_004556,NM_178148	chr6,chr6,chr6	+,-,-	TMEM151B,NFKBIE,SLC35B2	10865,5961,-1670
chr5:156637095-156638347	chr5	+	156637212	156638348	True	NM_130899,NM_005546	chr5,chr5	-,+	FAM71B,ITK	-43933,-29357
chr13:37247505-37248140	chr13	+	37247504	37247985	True	NM_001127217,NM_203451	chr13,chr13	-,+	SMAD9,C13orf36	246474,63
chrY:23567556-23567840	chrY	+	23567583	23567817	True	NR_001574,NM_001006121	chrY,chrY	-,+	RBMY2EP,RBMY1B	-4135,105406
chr17:7836048-7836374	chr17	+	7836117	7836355	True	NM_053051,NR_030697,NM_001166621,NR_030684,NM_004732,NM_001037144,NM_021210	chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,-,-,+,-	CNTROB,TRAPPC1,TRAPPC1,TRAPPC1,KCNAB3,CNTROB,TRAPPC1	-695,-800,-800,-850,-3364,-695,-850
chr10:47173687-47174091	chr10	+	47173694	47173984	True	NM_001137549,NM_001137548,NM_005972,NM_001137556,NM_001098845,NM_001040084	chr10,chr10,chr10,chr10,chr10,chr10	-,-,+,-,-,-	FAM25G,FAM25C,PPYR1,FAM25B,ANXA8L1,ANXA8	7754,7754,-90211,7754,106,188
chr10:47173687-47174091	chr10	+	49199601	49199687	False	NM_001137549,NM_001137548,NM_002750,NM_001137556	chr10,chr10,chr10,chr10	-,-,+,-	FAM25G,FAM25C,MAPK8,FAM25B	8188,8188,409999,8188
chr10:47173687-47174091	chr10	-	47747161	47747335	False	NR_024495,NM_001630	chr10,chr10	-,+	LOC642826,ANXA8L2	-503667,-292
chr10:47173687-47174091	chr10	-	48255362	48255652	False	NM_001137549,NM_001137548,NM_001137556,NM_001098845,NM_001040084,NM_002900	chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,-	FAM25G,FAM25C,FAM25B,ANXA8L1,ANXA8,RBP3	-7751,-7751,-7751,-106,-188,135389
chr1:2127136-2127394	chr1	+	2127188	2127394	True	NM_003036,NM_182533,NR_024445	chr1,chr1,chr1	+,-,-	SKI,C1orf86,LOC100128003	32739,-974,-2164
chr12:70079788-70080406	chr12	+	70079836	70080167	True	NM_022456,NM_152439	chr12,chr12	+,-	RAB3IP,BEST3	52463,2948
chr4:36187096-36188611	chr4	+	36187243	36188395	True	NM_015230,NM_001136536	chr4,chr4	-,+	ARAP2,DTHD1	57637,94848
chr16:30488593-30489577	chr16	+	30488877	30488974	True	NM_012248,NM_002209,NM_001114380	chr16,chr16,chr16	-,+,+	SEPHS2,ITGAL,ITGAL	-31653,-4954,-4954
chr1:116653559-116655296	chr1	+	116653904	116655178	True	NM_152367,NM_005599	chr1,chr1	+,-	MAB21L3,NHLH2	6,-270157
chr19:54042450-54043469	chr19	+	54042655	54043431	True	NM_001079906,NR_002938	chr19,chr19	+,-	ZNF331,LOC284379	-1376,63382
chr3:63636835-63638599	chr3	+	63637403	63638616	True	NM_025075,NM_001080537	chr3,chr3	-,+	THOC7,SNTN	211034,-8
chr17:46030992-46032152	chr17	+	46031112	46032119	True	NM_018129,NM_024320	chr17,chr17	+,-	PNPO,PRR15L	-12275,3042
chr12:65674361-65674808	chr12	+	65674361	65674680	True	NM_007191,NM_001031679,NM_198080,NM_001193460,NM_001193461	chr12,chr12,chr12,chr12,chr12	-,+,+,+,+	WIF1,MSRB3,MSRB3,MSRB3,MSRB3	-159015,-1999,-1999,-1999,-1655
chr1:205647164-205648275	chr1	+	205647471	205648191	True	NM_033102,NM_181644	chr1,chr1	-,+	SLC45A3,MFSD4	1489,-109418
chr5:68388005-68389683	chr5	+	68388341	68389597	True	NM_176816,NM_022902,NM_024055	chr5,chr5,chr5	-,+,+	CCDC125,SLC30A5,SLC30A5	226863,284,220
chr2:42719501-42719794	chr2	+	42719506	42719782	True	NM_020744,NM_172344,NM_133329	chr2,chr2,chr2	+,-,-	MTA3,KCNG3,KCNG3	75888,1505,1505
chr11:2192575-2192885	chr11	+	2192604	2192932	True	NM_199293,NM_199292,NR_028044,NM_000360	chr11,chr11,chr11,chr11	-,-,+,-	TH,TH,IGF2AS,TH	153,153,-30907,153
chrX:65260354-65261209	chrX	+	65260428	65261090	True	NM_001184831,NR_029637,NM_001100431,NM_001184830,NM_007268	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	VSIG4,MIR223,VSIG4,VSIG4,VSIG4	-461,-21775,-461,-461,-461
chr2:128050974-128051231	chr2	+	128050991	128051189	True	NM_000122,NM_000312	chr2,chr2	-,+	ERCC3,PROC	613,124806
chr10:30662417-30663589	chr10	+	30662441	30663485	True	NR_003524,NM_005204	chr10,chr10	-,+	LOC729668,MAP3K8	-50,59380
chr6:49579613-49580442	chr6	+	49579749	49580485	True	NM_001145652,NM_000324	chr6,chr6	+,-	C6orf141,RHAG	-61697,24159
chr16:53537040-53537255	chr16	+	53537068	53537304	True	NM_022476,NM_001012398,NM_005611	chr16,chr16,chr16	-,-,+	AKTIP,AKTIP,RBL2	-76,-76,-68768
chr9:41952206-41952561	chr9	+	41952476	41952559	True	NR_015363,NM_001012421	chr9,chr9	-,+	MGC21881,ANKRD20A2	2568,415743
chr9:41952206-41952561	chr9	+	46685526	46686016	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-3054796,1549
chr1:110214621-110215537	chr1	+	110214937	110215483	True	NM_005272,NM_001142368,NM_000848	chr1,chr1,chr1	-,+,+	GNAT2,GSTM2,GSTM2	-59232,-4344,-4344
chr8:133895215-133895811	chr8	+	133895262	133895830	True	NM_003235,NM_144649	chr8,chr8	+,-	TG,TMEM71	-16108,-122348
chrX:84286491-84287346	chrX	+	84286515	84287213	True	NM_001012980,NM_198450	chrX,chrX	-,+	SATL1,APOOL	76819,-27675
chr16:30903301-30903962	chr16	+	30903618	30903872	True	NM_001330,NM_004765,NR_031576,NM_001142544	chr16,chr16,chr16,chr16	+,-,+,+	CTF1,BCL7C,MIR762,CTF1	4055,1577,1351,4055
chr16:3627152-3627384	chr16	+	3627250	3627424	True	NM_024793,NM_178844	chr16,chr16	+,-	CLUAP1,NLRC3	-67407,18
chr12:110887257-110887600	chr12	+	110887382	110887594	True	NM_005719,NM_013300	chr12,chr12	-,+	ARPC3,C12orf24	614,18637
chr10:83633831-83634143	chr10	+	83633907	83634067	True	NM_001165973,NM_001165972,NM_138812,NM_001010848	chr10,chr10,chr10,chr10	+,+,-,+	NRG3,NRG3,DYDC1,NRG3	3375,1002,-1517407,1002
chr17:53045337-53045575	chr17	+	53045403	53045567	True	NM_001162862,NM_001162861,NM_178509,NR_027941,NR_027942,NM_004375	chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,-,-,-	COX11,COX11,STXBP4,COX11,COX11,COX11	547,547,558,547,547,547
chr15:91448713-91449159	chr15	+	91448807	91449147	True	NM_006122,NM_198527	chr15,chr15	+,-	MAN2A2,HDDC3	-1438,26677
chr5:173038644-173039047	chr5	+	173038665	173039014	True	NR_027109,NM_001159651,NM_138369	chr5,chr5,chr5	+,-,-	LOC285593,BOD1,BOD1	-32060,4715,4715
chr1:12954316-12956145	chr1	+	12954537	12956185	True	NM_001009611,NM_001012276,NM_001039361	chr1,chr1,chr1	-,+,-	PRAMEF4,PRAMEF8,PRAMEF10	-8512,20264,1965
chr1:12954316-12956145	chr1	-	13411369	13412691	False	NM_001012276,NM_001098376,NM_001010890	chr1,chr1,chr1	-,+,+	PRAMEF8,PRAMEF15,PRAMEF9	-20604,8484,8484
chr1:12954316-12956145	chr1	-	13632166	13633488	False	NM_001012276,NM_001098376,NM_001010890	chr1,chr1,chr1	-,+,+	PRAMEF8,PRAMEF15,PRAMEF9	-20616,8484,8484
chr7:47979828-47980429	chr7	+	47979861	47980362	True	NM_138295,NM_001100159	chr7,chr7	-,+	PKD1L1,C7orf57	7760,94754
chrX:110866682-110867551	chrX	+	110866682	110867562	True	NM_178153,NM_001039210	chrX,chrX	-,+	DCX,ALG13	-211222,56783
chr11:44996228-44997384	chr11	+	44996245	44997310	True	NM_006034,NR_026681	chr11,chr11	-,+	TP53I11,LOC221122	-23637,-843
chr2:158114266-158115184	chr2	+	158114270	158115181	True	NM_014568,NM_020711	chr2,chr2	+,-	GALNT5,ERMN	19,67292
chr19:35522910-35523132	chr19	+	35522949	35523161	True	NM_182983,NM_001037,NM_199037,NM_002151,NM_175872	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	HPN,SCN1B,SCN1B,HPN,ZNF792	8248,-1411,-1411,8248,-67996
chr3:16308443-16309009	chr3	+	16308442	16309042	True	NM_206831,NM_001047434,NM_138381	chr3,chr3,chr3	-,-,+	DPH3,DPH3,OXNAD1	-1946,-1946,-1832
chr1:167072119-167073078	chr1	+	167072293	167073053	True	NM_005814,NM_001080426	chr1,chr1	-,+	GPA33,DUSP27	-12425,-8257
chr11:118784185-118784684	chr11	+	118784561	118784627	True	NM_032966,NM_182557	chr11,chr11	+,-	CXCR5,BCL9L	-20511,-2948
chr7:4719284-4720317	chr7	+	4719286	4719612	True	NM_020144,NM_001037165	chr7,chr7	-,+	PAPOLB,FOXK1	182065,2317
chr19:1065726-1065935	chr19	+	1065891	1065959	True	NM_002695,NM_012292	chr19,chr19	-,+	POLR2E,HMHA1	29482,1214
chr20:50156331-50157336	chr20	+	50156387	50157264	True	NM_173091,NM_014484,NM_012340	chr20,chr20,chr20	-,+,-	NFATC2,MOCS3,NFATC2	2044,-581083,2044
chr19:14532299-14533866	chr19	+	14532660	14533745	True	NM_001204057,NM_005804,NM_002741	chr19,chr19,chr19	-,-,+	DDX39A,DDX39A,PKN1	-2754,-2465,10420
chr7:44196192-44197481	chr7	+	44196319	44197157	True	NM_006555,NM_033507,NM_033508	chr7,chr7,chr7	+,-,-	YKT6,GCK,GCK	43420,1780,1780
chr1:47015163-47016013	chr1	+	47015344	47015834	True	NM_001097611,NM_172225	chr1,chr1	-,+	KNCN,DMBX1	1103,-42727
chr16:29831037-29831674	chr16	+	29831036	29831564	True	NM_006319,NM_024516,NM_017458,NM_145239,NM_005115	chr16,chr16,chr16,chr16,chr16	-,+,+,+,+	CDIPT,C16orf53,MVP,PRRT2,MVP	43064,-3559,150,-7678,150
chr7:45148664-45150120	chr7	+	45148850	45149942	True	NM_030900,NM_199122,NR_002990,NR_002919,NR_002991,NM_004749,NM_005856	chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,-,+	TBRG4,TBRG4,SNORA5B,SNORA5A,SNORA5C,TBRG4,RAMP3	1425,1425,-3152,-4769,-4209,1425,47424
chr2:20212732-20213020	chr2	+	20212840	20213050	True	NR_033875,NM_002381	chr2,chr2	+,-	FLJ12334,MATN3	-144276,-385
chr12:7168054-7169152	chr12	+	7168166	7169065	True	NM_001734,NM_201442,NM_005768	chr12,chr12,chr12	+,+,-	C1S,C1S,LPCAT3	-238,-238,-42324
chr7:95030403-95031831	chr7	+	95030663	95031652	True	NM_145872,NM_000940	chr7,chr7	+,-	ASB4,PON3	83560,-4976
chr17:73841749-73842015	chr17	+	73841751	73841965	True	NM_012478,NM_199242,NM_001080419	chr17,chr17,chr17	-,-,+	WBP2,UNC13D,UNK	9586,-953,-61121
chr21:17590762-17592664	chr21	+	17591180	17592329	True	NM_003489,NR_027791	chr21,chr21	-,+	NRIP1,C21orf34	-1154054,-24545
chr9:140472266-140472489	chr9	+	140472322	140472494	True	NM_032477,NM_138778	chr9,chr9	+,-	MRPL41,WDR85	-26064,943
chr13:76043571-76044598	chr13	+	76043922	76044514	True	NM_014832,NM_006002	chr13,chr13	-,+	TBC1D4,UCHL3	11786,79412
chr11:47206971-47207195	chr11	+	47207024	47207233	True	NM_032389,NM_000107,NM_001184974,NM_001184975,NM_016223	chr11,chr11,chr11,chr11,chr11	-,+,-,-,-	ARFGAP2,DDB2,PACSIN3,PACSIN3,PACSIN3	-8605,29259,827,249,827
chr14:21057968-21059906	chr14	+	21058083	21059906	True	NM_001024822,NM_145250,NM_001012975	chr14,chr14,chr14	-,-,+	RNASE12,RNASE11,RNASE10	93,12,-79504
chr12:52681866-52683179	chr12	+	52681876	52683048	True	NM_002284,NM_002281	chr12,chr12	+,-	KRT86,KRT81	12600,2301
chr12:52681866-52683179	chr12	-	52697905	52698297	False	NM_002284,NM_002281	chr12,chr12	+,-	KRT86,KRT81	-2307,-12606
chr1:24238978-24239769	chr1	+	24238988	24239374	True	NM_001841,NM_017761	chr1,chr1	-,+	CNR2,PNRC2	493,46926
chr9:110252769-110253105	chr9	+	110252798	110252938	True	NM_004235,NM_002874	chr9,chr9	-,+	KLF4,RAD23B	-751,-207309
chr17:8816227-8816649	chr17	+	8816252	8816640	True	NM_004822,NM_014308	chr17,chr17	+,-	NTN1,PIK3R5	108218,-418
chr11:117693688-117694005	chr11	+	117693777	117694051	True	NM_001680,NM_001558,NM_021603	chr11,chr11,chr11	-,+,-	FXYD2,IL10RA,FXYD2	1458,163054,4806
chr8:53624508-53626276	chr8	+	53624674	53626243	True	NM_014781,NM_001083617,NM_005285	chr8,chr8,chr8	-,-,+	RB1CC1,RB1CC1,NPBWR1	833,833,226224
chr1:145822698-145823237	chr1	+	145822838	145823165	True	NM_001097612,NM_001097613,NM_001097616,NR_036541	chr1,chr1,chr1,chr1	-,-,+,-	GPR89A,GPR89A,GPR89C,GPR89A	3995,3995,60702,3995
chr1:145822698-145823237	chr1	-	147404538	147404588	False	NR_003377,NM_016334	chr1,chr1	-,+	PDZK1P1,GPR89B	79793,-4083
chr1:13516191-13516799	chr1	+	13516190	13516383	True	NM_001100114,NM_001099852,NM_001099850	chr1,chr1,chr1	+,+,-	PRAMEF21,PRAMEF20,PRAMEF18	5579,-175,-38621
chr1:13516191-13516799	chr1	+	13737031	13737224	False	NM_001100114,NM_001099852,NM_001099850	chr1,chr1,chr1	+,+,-	PRAMEF21,PRAMEF20,PRAMEF18	5577,-175,-38626
chr4:76059176-76059790	chr4	+	76059187	76059784	True	NM_001729,NM_015393	chr4,chr4	-,+	BTC,PARM1	-339305,-200960
chr2:239113255-239114913	chr2	+	239113300	239114841	True	NM_030768,NR_026923	chr2,chr2	-,+	ILKAP,LOC643387	-976,25485
chr5:175513855-175514222	chr5	+	175513854	175514270	True	NR_036494,NM_001079529	chr5,chr5	-,+	LOC643201,FAM153B	112078,-1996
chr5:175513855-175514222	chr5	-	177177931	177178313	False	NR_003615,NM_173663	chr5,chr5	+,-	LOC728554,FAM153A	123948,29242
chr5:175513855-175514222	chr5	+	177459483	177459899	False	NM_006261,NM_001079527	chr5,chr5	-,+	PROP1,FAM153C	-36240,-23845
chr4:95372002-95372282	chr4	+	95372152	95372280	True	NM_001011513,NM_001011516,NM_001011515,NM_014485,NM_006457,NR_024179	chr4,chr4,chr4,chr4,chr4,chr4	+,+,+,-,+,+	PDLIM5,PDLIM5,PDLIM5,HPGDS,PDLIM5,PDLIM5	757,757,757,-108125,757,757
chr15:90643130-90644408	chr15	+	90643178	90644283	True	NM_002168,NM_020210	chr15,chr15	-,+	IDH2,SEMA4B	1475,83868
chr12:5420417-5420797	chr12	+	5420468	5420831	True	NM_020373,NM_001102654	chr12,chr12	-,+	ANO2,NTF3	634617,120448
chr17:61960002-61960408	chr17	+	61960107	61960397	True	NM_020991,NM_022645,NM_022644,NM_022557,NM_022556,NR_002947,NM_002059,NM_022558	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,+,-,-	CSH2,CSH2,CSH2,GH2,GH2,TCAM1P,GH2,GH2	-9018,-9018,-9018,-884,-884,-25782,-884,-884
chr22:24315725-24315955	chr22	+	24315729	24315883	True	NM_001084393,NM_001355,NM_000854,NM_001084392	chr22,chr22,chr22,chr22	+,-,+,-	DDTL,DDT,GSTT2,DDT	-6754,6186,6430,847
chr22:24315725-24315955	chr22	-	24309822	24309976	False	NM_000854,NM_001080843,NM_001084393,NM_001084392	chr22,chr22,chr22,chr22	-,-,+,-	GSTT2,GSTT2B,DDTL,DDT	-6429,-6454,-847,6754
chr15:78796659-78797080	chr15	+	78797030	78797092	True	NM_001083612,NM_001166694,NM_001013619	chr15,chr15,chr15	+,-,+	AGPHD1,CHRNA3,AGPHD1	2813,116597,2813
chr1:108732360-108733910	chr1	+	108732719	108733579	True	NM_213651,NM_013386,NM_001143987	chr1,chr1,chr1	-,-,+	SLC25A24,SLC25A24,NBPF6	1834,9445,259324
chr5:38855154-38855473	chr5	+	38855234	38855506	True	NM_003999,NM_001168355,NM_152756	chr5,chr5,chr5	+,+,-	OSMR,OSMR,RICTOR	-9184,-9325,219045
chr14:67997706-67999321	chr14	+	67997721	67999234	True	NM_020715,NM_182526	chr14,chr14	+,-	PLEKHH1,TMEM229B	773,-15700
chr3:155366670-155367487	chr3	+	155366732	155367433	True	NM_001130960,NM_003875	chr3,chr3	-,+	PLCH1,GMPS	26723,220891
chr19:11093334-11093561	chr19	+	11093512	11093576	True	NM_001128846,NM_001128847,NM_024029,NM_001128845,NM_001128848	chr19,chr19,chr19,chr19,chr19	+,+,-,+,+	SMARCA4,SMARCA4,YIPF2,SMARCA4,SMARCA4	1251,1251,-54155,1251,1251
chr3:51741518-51743488	chr3	+	51742064	51743459	True	NM_001143833,NM_001130063,NM_000839	chr3,chr3,chr3	-,+,+	IQCF6,GRM2,GRM2	69794,-1034,-1034
chr15:25103122-25103802	chr15	+	25103192	25103668	True	NM_022805,NM_130838	chr15,chr15	+,-	SNRPN,UBE3A	-1545,547035
chr19:32897218-32897547	chr19	+	32897527	32897593	True	NM_207325,NM_032139,NM_001172774	chr19,chr19,chr19	+,-,+	DPY19L3,ANKRD27,DPY19L3	-556,268559,-923
chr5:49693612-49694533	chr5	+	49693925	49694362	True	NM_198449,NM_001178055	chr5,chr5	-,+	EMB,PARP8	42931,267370
chr22:31645062-31645713	chr22	+	31645069	31645731	True	NM_001031801,NM_001135911,NM_016733	chr22,chr22,chr22	+,-,+	LIMK2,PIK3IP1,LIMK2	-772,42839,-772
chr16:30969908-30970210	chr16	+	30970089	30970225	True	NM_014712,NM_152288,NR_024348	chr16,chr16,chr16	+,+,-	SETD1A,ORAI3,FBXL19-AS1	-1525,-9735,-35499
chr7:134576384-134577963	chr7	+	134576677	134577981	True	NM_033139,NM_033140,NM_024033	chr7,chr7,chr7	+,+,-	CALD1,CALD1,C7orf49	-578,-578,277601
chr12:51819313-51820655	chr12	+	51819470	51820584	True	NM_001039960,NM_004858,NM_007210	chr12,chr12,chr12	+,+,-	SLC4A8,SLC4A8,GALNT6	-934,-934,-34270
chr16:19315220-19315430	chr16	+	19315222	19315450	True	NR_024436,NM_016641	chr16,chr16	+,-	LOC728276,GDE1	-18169,218050
chr2:17937986-17938846	chr2	+	17938033	17938864	True	NM_024624,NM_001130009,NM_001142286,NM_182625	chr2,chr2,chr2,chr2	-,+,-,+	SMC6,GEN1,SMC6,GEN1	-2937,-2685,-2937,-2922
chr19:55593966-55594557	chr19	+	55594118	55594604	True	NM_133180,NM_138412,NM_017729	chr19,chr19,chr19	+,-,+	EPS8L1,RDH13,EPS8L1	-6954,-13204,-2415
chr2:107159625-107159840	chr2	+	107159624	107159719	True	NM_001144013,NR_003506	chr2,chr2	-,+	RGPD3,PLGLA	-74823,-156906
chr2:74610920-74611498	chr2	+	74611057	74611543	True	NM_001135040,NM_001135041,NM_023019,NM_001190836,NM_001190837,NR_024463,NR_033935,NM_004082	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	-,-,-,-,-,+,-,-	DCTN1,DCTN1,DCTN1,DCTN1,DCTN1,LOC100189589,DCTN1,DCTN1	-3575,-9195,-9195,7721,-3575,1301,7721,-3575
chr10:46992268-46992531	chr10	+	46992326	46992524	True	NM_014696,NM_031912	chr10,chr10	+,-	GPRIN2,SYT15	1021,-21725
chr1:116913634-116914884	chr1	+	116913637	116914741	True	NR_024126,NM_000701,NM_001160233	chr1,chr1,chr1	-,+,+	ATP1A1OS,ATP1A1,ATP1A1	46493,1053,1747
chr16:84180245-84181595	chr16	+	84180386	84181029	True	NM_031463,NM_001146051,NM_178452	chr16,chr16,chr16	-,-,+	HSDL1,HSDL1,LRRC50	-1586,-1586,-1577
chrY:6111650-6112137	chrY	+	6111696	6112082	True	NM_022573,NR_001540,NR_003593	chrY,chrY,chrY	+,-,-	TSPY2,TTTY23,TTTY23B	2181,-45,-45
chrY:6111650-6112137	chrY	-	9747975	9748361	False	NR_001540,NR_003593,NR_003589	chrY,chrY,chrY	+,+,-	TTTY23,TTTY23B,TTTY1B	45,45,-136047
chr9:131313556-131314227	chr9	+	131313594	131314050	True	NM_001195532,NM_001130438,NM_052844,NM_003127	chr9,chr9,chr9,chr9	+,+,-,+	SPTAN1,SPTAN1,WDR34,SPTAN1	786,786,105131,786
chr8:133839148-133839354	chr8	+	133839149	133839393	True	NM_003235,NM_144649	chr8,chr8	+,-	TG,TMEM71	39811,-66235
chrX:24664939-24665542	chrX	+	24664950	24665538	True	NM_001163265,NM_016937,NM_004845	chrX,chrX,chrX	-,+,-	PCYT1B,POLA1,PCYT1B	11,46525,11
chr19:46282041-46282418	chr19	+	46282159	46282429	True	NM_004409,NM_001081563,NM_001081562,NM_001081560,NM_175875,NM_004497	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,+	DMPK,DMPK,DMPK,DMPK,SIX5,FOXA3	3436,1482,3436,3436,-9662,85088
chr19:45505010-45505259	chr19	+	45505055	45505251	True	NM_145288,NM_006509	chr19,chr19	-,+	ZNF296,RELB	74487,-399
chr11:65380729-65381008	chr11	+	65380730	65381042	True	NM_032223,NM_002419	chr11,chr11	+,-	PCNXL3,MAP3K11	2740,728
chr1:48231256-48231917	chr1	+	48231408	48231918	True	NM_001194986,NM_004474	chr1,chr1	-,+	LOC388630,FOXD2	230694,-329772
chr12:72058649-72060184	chr12	+	72058692	72059808	True	NM_031435,NM_144982	chr12,chr12	+,-	THAP2,ZFC3H1	-1066,-943
chr22:41483506-41484553	chr22	+	41483538	41483668	True	NM_138481,NR_031694,NM_001429	chr22,chr22,chr22	-,+,+	CHADL,MIR1281,EP300	153319,4848,4945
chr22:17641260-17642168	chr22	+	17641580	17641775	True	NM_017829,NM_033070,NR_024482,NR_024483	chr22,chr22,chr22,chr22	-,-,+,+	CECR5,CECR5,CECR4,CECR4	4461,-1411,-1352,-1352
chr2:23642943-23643333	chr2	+	23642959	23643257	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	506727,-34712
chr22:46665103-46665671	chr22	+	46665178	46665702	True	NM_006071,NM_017931	chr22,chr22	-,+	PKDREJ,TTC38	-5959,-1368
chrX:71495017-71495554	chrX	+	71495042	71495602	True	NM_001170747,NM_001007	chrX,chrX	+,-	PIN4,RPS4X	-93567,1589
chr11:7338099-7339788	chr11	+	7338190	7339170	True	NM_013249,NM_175733	chr11,chr11	-,+	ZNF214,SYT9	-296604,-65067
chr16:23605966-23606426	chr16	+	23606102	23606263	True	NM_019116,NM_005003	chr16,chr16	+,-	UBFD1,NDUFAB1	-37299,1433
chr14:105445944-105446447	chr14	+	105446002	105446496	True	NM_174891,NM_138420	chr14,chr14	+,-	C14orf79,AHNAK2	6119,-1308
chr15:90071775-90073228	chr15	+	90071816	90073284	True	NR_027074,NR_027075,NR_027076,NR_027077,NM_152259	chr15,chr15,chr15,chr15,chr15	-,-,-,-,+	LOC283761,LOC283761,LOC283761,LOC283761,C15orf42	-4551,-4551,-4551,-4551,45533
chr16:56623317-56623979	chr16	+	56623407	56623997	True	NM_005954,NM_031885	chr16,chr16	+,-	MT3,BBS2	-191,-69399
chr3:44915983-44916264	chr3	+	44916037	44916215	True	NM_003241,NM_001135179	chr3,chr3	+,-	TGM4,ZDHHC3	10,101509
chr7:64312784-64313675	chr7	+	64312925	64313569	True	NR_002789,NM_021148	chr7,chr7	-,+	LOC168474,ZNF273	659,50050
chr2:39003697-39003969	chr2	+	39003732	39003978	True	NM_001195446,NM_024775	chr2,chr2	-,+	SRSF7,GEMIN6	-25096,1348
chr11:78127616-78128000	chr11	+	78127620	78127984	True	NM_080491,NM_020798	chr11,chr11	-,+	GAB2,USP35	934,-227813
chr6:26379238-26380694	chr6	+	26379391	26380700	True	NM_006995,NM_003543,NM_181531,NM_001197237,NM_001197239,NM_001197238,NM_001197240	chr6,chr6,chr6,chr6,chr6,chr6,chr6	+,-,+,+,+,+,+	BTN2A2,HIST1H4H,BTN2A2,BTN2A2,BTN2A2,BTN2A2,BTN2A2	2628,-93664,2628,2738,2628,2623,2628
chr8:7971510-7973343	chr8	+	7971597	7973358	True	NR_031689,NR_024362	chr8,chr8	-,+	MIR548I3,FLJ10661	-24986,112733
chr8:7971510-7973343	chr8	-	7029167	7030928	False	NR_027000,NM_001164452	chr8,chr8	-,+	LOC349196,FAM90A14	90136,83497
chr8:41387246-41388510	chr8	+	41387425	41388502	True	NM_152568,NM_032336	chr8,chr8	-,+	NKX6-3,GINS4	116427,-752
chr2:140425499-140426616	chr2	+	140425499	140426544	True	NM_007226,NR_033658	chr2,chr2	-,+	NXPH2,LOC647012	-887688,-770656
chr17:55334346-55334565	chr17	+	55334383	55334507	True	NM_004645,NM_138962,NM_170721	chr17,chr17,chr17	-,+,+	COIL,MSI2,MSI2	-295972,-503,-60
chr10:35416643-35417293	chr10	+	35416705	35417330	True	NM_182850,NM_182853,NM_181571,NM_183060,NM_001881,NM_001198777,NM_183012,NM_183013,NM_183011	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,-,+,+,+	CREM,CREM,CREM,CREM,CREM,CUL2,CREM,CREM,CREM	-955,-955,-368,-368,-955,-37135,9379,-955,9379
chr3:53199267-53199975	chr3	+	53199319	53199963	True	NM_006254,NM_052859,NM_212539	chr3,chr3,chr3	+,-,+	PRKCD,RFT1,PRKCD	-4147,-34849,-4147
chr21:34601591-34602082	chr21	+	34601590	34602094	True	NM_207585,NM_207584,NR_024102,NM_000874	chr21,chr21,chr21,chr21	+,+,-,+	IFNAR2,IFNAR2,C21orf54,IFNAR2	136,136,-59049,136
chr8:22502849-22503355	chr8	+	22503139	22503377	True	NR_027715,NM_021174	chr8,chr8	-,+	FLJ14107,KIAA1967	-3417,-40651
chr9:117090121-117091690	chr9	+	117090215	117091687	True	NM_000607,NM_000608,NM_030767	chr9,chr9,chr9	+,+,-	ORM1,ORM2,AKNA	-4963,381,65048
chr1:249123699-249124178	chr1	+	249123776	249123867	True	NM_024836,NR_036070,NM_030645	chr1,chr1,chr1	+,+,-	ZNF672,MIR3124,SH3BP5L	8662,-3253,-3622
chr6:126069593-126069819	chr6	+	126069649	126069781	True	NM_016063,NM_012259	chr6,chr6	-,+	HDDC2,HEY2	-446367,950
chr19:50532490-50533199	chr19	+	50532791	50533073	True	NM_001025778,NM_001006656,NM_016440,NM_015428	chr19,chr19,chr19,chr19	-,+,-,+	VRK3,ZNF473,VRK3,ZNF473	-3986,-3633,-3986,-3633
chr1:161736484-161737804	chr1	+	161736496	161737447	True	NM_007348,NR_002595	chr1,chr1	+,-	ATF6,RPL31P11	-463,-81454
chr6:10743001-10744867	chr6	+	10743639	10744379	True	NM_030969,NR_026736,NM_001127711	chr6,chr6,chr6	+,-,+	TMEM14B,C6orf52,TMEM14B	3615,-48609,3615
chr17:44440000-44440403	chr17_ctg5_hap1	-	390465	390531	False	NM_006178,NM_001113738,NM_001039083,NM_016632,NM_001103154,NR_033799	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	-,+,+,+,+,-	NSF,ARL17A,ARL17B,ARL17A,ARL17B,NSFP1	-9850,1051,1080,1051,1080,-9912
chr17:44440000-44440403	chr17_ctg5_hap1	+	1514934	1515000	False	NM_016632	chr17_ctg5_hap1	-	ARL17A	-1050
chr17:44440000-44440403	chr17	+	44440212	44440278	True	NM_001039083,NM_001113738,NM_001103154,NM_016632,NR_033799	chr17,chr17,chr17,chr17,chr17	-,-,-,-,+	ARL17B,ARL17A,ARL17B,ARL17A,NSFP1	-1078,-1049,-1078,-1049,9900
chr17:44440000-44440403	chr17	+	44658137	44658203	False	NM_001113738,NR_033799,NM_016632,NM_006178	chr17,chr17,chr17,chr17	-,+,-,+	ARL17A,NSFP1,ARL17A,NSF	-1049,9896,-1049,9834
chr1:2565394-2566026	chr1	+	2565493	2565947	True	NM_033467,NM_152371	chr1,chr1	-,+	MMEL1,C1orf93	-1012,-47355
chr1:91408920-91409842	chr1	+	91409258	91409859	True	NM_016620,NM_001134419	chr1,chr1	-,+	ZNF644,CDC7	77221,556544
chr20:43977421-43978094	chr20	+	43977435	43977755	True	NM_002999,NM_001197129	chr20,chr20	-,+	SDC4,SYS1	-371,12821
chr14:39700278-39701628	chr14	+	39700281	39701240	True	NM_177452,NM_054024	chr14,chr14	-,+	TRAPPC6B,MIA2	-60647,1884
chr8:42996632-42996946	chr8	+	42996744	42996914	True	NR_027669,NM_152419	chr8,chr8	-,+	RNF170,HGSNAT	-244878,-1203
chr1:202129631-202130098	chr1	+	202129712	202130120	True	NR_002930,NR_037663,NR_037664,NM_001199797,NM_080588,NM_002832	chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,-,-,-	PTPRVP,PTPN7,PTPN7,PTPN7,PTPN7,PTPN7	7058,646,646,646,-593,646
chr4:6912793-6914029	chr4	+	6912829	6913842	True	NM_001113361,NM_153376,NM_020773	chr4,chr4,chr4	+,-,+	TBC1D14,CCDC96,TBC1D14	-1709,130941,-1385
chr17:43236402-43237107	chr17	+	43236496	43236837	True	NM_144608,NM_133373	chr17,chr17	+,-	HEXIM2,PLCD3	1426,-26605
chr7:149468431-149468730	chr7	+	149468549	149468703	True	NM_207336,NM_198455	chr7,chr7	-,+	ZNF467,SSPO	1642,4427
chr6:14896613-14897049	chr6	+	14896622	14897032	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	349494,766307
chr19:58459216-58459477	chr19	+	58459287	58459423	True	NR_036508,NM_005773	chr19,chr19	+,-	LOC100128398,ZNF256	54838,-210
chr5:32710448-32710739	chr5	+	32710450	32710688	True	NM_001204376,NM_000908,NM_001204375,NM_016107	chr5,chr5,chr5,chr5	+,+,+,-	NPR3,NPR3,NPR3,ZFR	54,749,749,-265606
chr6:160211761-160212006	chr6	+	160211765	160211970	True	NR_002965,NM_014161,NM_173516,NM_030752,NM_001008897	chr6,chr6,chr6,chr6,chr6	-,+,+,-,-	SNORA29,MRPL18,PNLDC1,TCP1,TCP1	-5000,-324,9330,-1030,-1030
chr19:44556212-44556421	chr19	+	44556211	44556361	True	NR_033341,NM_013361	chr19,chr19	-,+	LOC100379224,ZNF223	61025,-98
chr12:80273517-80274848	chr12	+	80273723	80274556	True	NM_001143886,NM_173591	chr12,chr12	-,+	PPP1R12A,OTOGL	33186,328676
chr19:16437268-16437495	chr19	+	16437349	16437423	True	NM_021235,NM_016270	chr19,chr19	-,+	EPS15L1,KLF2	145389,-1749
chr14:23058619-23058959	chr14	+	23058789	23058993	True	NM_022060,NM_001344	chr14,chr14	+,-	ABHD4,DAD1	8153,-646
chr16:29303501-29304309	chr16	+	29303661	29304185	True	NR_002939,NM_001031827	chr16,chr16	+,-	RUNDC2C,BOLA2	-1171,162152
chr16:29303501-29304309	chr16	+	88300196	88300516	False	NM_001127464,NM_001739	chr16,chr16	+,-	ZNF469,CA5A	193362,-330084
chr1:37501194-37501836	chr1	+	37501245	37501809	True	NR_036217,NM_000831	chr1,chr1	+,-	MIR4255,GRIK3	125354,-1401
chr1:23696577-23697671	chr1	+	23696708	23697479	True	NR_033691,NR_033690,NM_001077195,NM_030634	chr1,chr1,chr1,chr1	+,+,-,-	C1orf213,C1orf213,ZNF436,ZNF436	-1048,-1295,-351,-1829
chr4:20845072-20846117	chr4	+	20845728	20846163	True	NM_147181,NM_145048	chr4,chr4	-,+	KCNIP4,PACRGL	6179,-143750
chr11:17739253-17739706	chr11	+	17739306	17739752	True	NM_153676,NM_002478	chr11,chr11	-,+	USH1C,MYOD1	-173343,1357
chr14:45550760-45551085	chr14	+	45550765	45550919	True	NM_017922,NM_002013	chr14,chr14	+,-	PRPF39,FKBP3	2382,52867
chr5:99390259-99390602	chr5	+	99390260	99390644	True	NM_198507,NR_027503	chr5,chr5	+,-	FAM174A,LOC100133050	480479,333364
chr19:44006192-44006901	chr19	+	44006279	44006595	True	NM_198850,NM_174945	chr19,chr19	-,+	PHLDB3,ZNF575	2440,30744
chrX:1709545-1710259	chrY	+	1660140	1660208	False	NM_005088,NR_027383,NM_004043,NM_178129	chrY,chrY,chrY,chrY	+,+,+,-	AKAP17A,AKAP17A,ASMT,P2RY8	277,277,4139,-54103
chrX:1709545-1710259	chrX	+	1710140	1710208	True	NM_005088,NR_027383,NM_004043,NM_178129	chrX,chrX,chrX,chrX	+,+,+,-	AKAP17A,AKAP17A,ASMT,P2RY8	277,277,4139,-54103
chr1:115394757-115396300	chr1	+	115394869	115396085	True	NM_003176,NM_025073	chr1,chr1	+,-	SYCP1,SIKE1	1369,-71561
chr8:32413282-32415218	chr8	+	32413335	32415080	True	NM_013957,NM_013956,NM_013958,NM_013964,NM_001160008,NM_004495,NM_013960,NM_001160007,NM_001160004,NM_001160005,NM_001160002,NM_032664	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	+,+,+,+,+,+,+,+,+,+,+,-	NRG1,NRG1,NRG1,NRG1,NRG1,NRG1,NRG1,NRG1,NRG1,NRG1,NRG1,FUT10	-7667,-7667,-7667,-7667,-7667,-7667,-7667,-7667,-7667,-7667,-7667,915648
chr19:8675785-8676488	chr19	+	8676373	8676459	True	NM_030957,NM_001004699	chr19,chr19	-,+	ADAMTS10,OR2Z1	-785,164931
chr2:101435945-101436232	chr2	+	101435989	101436229	True	NM_001102426,NM_002518	chr2,chr2	-,+	TBC1D8,NPAS2	331667,383
chr5:134181492-134181694	chr5	+	134181555	134181695	True	NM_152409,NM_002653,NM_001135586	chr5,chr5,chr5	+,-,+	C5orf24,PITX1,C5orf24	-236,188319,-30
chr2:127960598-127961696	chr2	+	127960786	127961373	True	NM_001001665,NM_000312	chr2,chr2	-,+	CYP27C1,PROC	2021,214622
chr1:52083362-52083984	chr1	+	52083405	52083675	True	NM_148909,NM_148908,NM_001981,NM_024586,NM_148906,NR_036662	chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,+,+,+	OSBPL9,OSBPL9,EPS15,OSBPL9,OSBPL9,OSBPL9	-910,-910,-98410,-910,-910,-910
chr19:52377773-52379237	chr19	+	52378000	52379273	True	NR_024181,NM_001031721	chr19,chr19	-,+	ZNF577,ZNF613	11966,51414
chr9:138327342-138329001	chr9	+	138327438	138328949	True	NM_014811,NM_001048265	chr9,chr9	+,-	KIAA0649,C9orf116	42698,62872
chr1:3605486-3605977	chr1	+	3605491	3605893	True	NM_001126242,NM_001204189,NM_001126240,NM_001126241,NM_001204192,NM_001204191,NM_001204190,NM_017818	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,+,+,-	TP73,TP73,TP73,TP73,TP73,TP73,TP73,WDR8	1342,1342,1342,1342,8716,1342,1342,-38820
chrX:11688219-11689512	chrX	+	11688439	11689480	True	NM_078628,NM_013427,NM_006125	chrX,chrX,chrX	+,-,-	MSL3,ARHGAP6,ARHGAP6	86797,-4618,-4618
chr5:134914206-134914473	chr5	+	134914393	134914481	True	NM_004887,NM_145282	chr5,chr5	-,+	CXCL14,SLC25A48	538,255883
chr7:1013755-1014385	chr7	+	1014127	1014214	True	NM_001031617,NM_017781	chr7,chr7	-,+	COX19,CYP2W1	1072,8620
chrX:154300737-154300995	chrX	+	154300742	154300852	True	NM_001018024,NM_024332,NM_001018055,NM_001018025	chrX,chrX,chrX,chrX	-,+,+,-	MTCP1NB,BRCC3,BRCC3,MTCP1	-1195,-1086,-1086,-1195
chr10:89118522-89119262	chr10	+	89118557	89119265	True	NM_001009610,NR_024397	chr10,chr10	+,-	FAM22D,LOC728190	-1131,-16242
chr10:89118522-89119262	chr10	+	52437640	52437959	False	NM_147156,NM_001079516	chr10,chr10	-,+	SGMS1,ASAH2B	-53903,61748
chr10:89118522-89119262	chr10	+	88986338	88987046	False	NM_001099338,NR_024397	chr10,chr10	+,-	FAM22A,LOC728190	-1184,115319
chr10:89118522-89119262	chr10	+	81464116	81464824	False	NR_027512,NM_001098668	chr10,chr10	+,-	LOC650623,SFTPA2	-21436,-143953
chr10:89118522-89119262	chr10	+	81602247	81602955	False	NR_029407,NM_003019	chr10,chr10	+,-	LOC642361,SFTPD	-16640,105956
chr20:2780430-2780998	chr20	+	2780471	2780977	True	NM_080739,NM_001184699,NM_019609	chr20,chr20,chr20	+,-,-	C20orf141,CPXM1,CPXM1	14679,365,365
chr7:130343915-130344674	chr7	+	130344215	130344438	True	NM_012133,NR_029899	chr7,chr7	-,+	COPG2,MIR335	9217,-208323
chr12:50565464-50566096	chr12	+	50565591	50565884	True	NM_032901,NM_147190	chr12,chr12	+,-	C12orf62,LASS5	-59742,-4494
chr7:129845312-129845830	chr7	+	129845426	129845880	True	NM_145268,NM_032842	chr7,chr7	+,-	C7orf45,TMEM209	1823,-88
chr19:39445693-39446828	chr19	+	39446015	39446468	True	NM_148169,NM_033363	chr19,chr19	-,+	FBXO17,MRPS12	-2688,-24474
chr20:48600076-48600416	chr20	+	48600166	48600376	True	NM_006038,NM_005985	chr20,chr20	-,+	SPATA2,SNAI1	-68086,-704
chr15:58424307-58426082	chr15	+	58424438	58425803	True	NM_020980,NM_170696	chr15,chr15	+,-	AQP9,ALDH1A2	4604,-66532
chr10:99160204-99160819	chr10	+	99160240	99160758	True	NM_015179,NM_001145114,NM_002629	chr10,chr10,chr10	-,-,+	RRP12,RRP12,PGAM1	419,419,25268
chr11:5622299-5622910	chr11	+	5622388	5622557	True	NM_001003819,NM_001003818,NM_001005289,NM_001198645,NM_001198644,NM_058166	chr11,chr11,chr11,chr11,chr11,chr11	+,+,-,+,+,+	TRIM6-TRIM34,TRIM6,OR52H1,TRIM6,TRIM6,TRIM6	-4574,-4574,-55635,-4574,-4574,-5108
chr22:50354939-50355224	chr22	+	50354956	50355271	True	NM_024105,NM_001001852	chr22,chr22	-,+	ALG12,PIM3	-42850,-864
chr4:186458567-186459927	chr4	+	186458811	186459907	True	NM_001114357,NM_001114107,NM_014476	chr4,chr4,chr4	+,-,-	C4orf47,PDLIM3,PDLIM3	-108317,-2099,-2099
chr11:103907537-103907953	chr11	+	103907551	103907867	True	NM_025208,NM_001001711	chr11,chr11	-,+	PDGFD,DDI1	127210,-294
chr16:55522373-55522625	chr16	+	55522451	55522611	True	NM_001127891,NM_001025194,NM_004530	chr16,chr16,chr16	+,-,+	MMP2,CES1,MMP2	-7028,344514,-9421
chr2:114369660-114370667	chr2	+	114369907	114369972	True	NM_007082,NR_024004	chr2,chr2	+,-	RABL2A,DDX11L2	14844,-8613
chr1:215255554-215255766	chr1	+	215255569	215255779	True	NM_001017425,NM_014217,NM_005401	chr1,chr1,chr1	+,+,-	KCNK2,KCNK2,PTPN14	780,780,-530545
chr6:137819123-137819331	chr6	+	137819216	137819376	True	NM_006290,NM_175747	chr6,chr6	+,-	TNFAIP3,OLIG3	369204,-3685
chr14:70233088-70233625	chr14	+	70233194	70233555	True	NM_001039465,NR_029378,NM_006925	chr14,chr14,chr14	+,-,+	SRSF5,LOC100289511,SRSF5	273,926,278
chr1:185287308-185287781	chr1	+	185287316	185287835	True	NM_017673,NM_006469	chr1,chr1	+,-	SWT1,IVNS1ABP	-161076,-855
chr1:108506747-108507072	chr1	+	108506796	108507118	True	NM_001143987,NM_006113	chr1,chr1	+,-	NBPF6,VAV3	485785,477
chr15:53096790-53097004	chr15	+	53096872	53097018	True	NM_004498,NM_002748	chr15,chr15	-,+	ONECUT1,MAPK6	-14663,-785512
chr2:219647202-219647409	chr2	+	219647201	219647395	True	NM_000784,NM_017431	chr2,chr2	+,-	CYP27A1,PRKAG3	-780,49167
chr6:14961249-14961622	chr6	+	14961314	14961638	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	284888,701701
chr17:7817756-7818980	chr17	+	7817944	7818858	True	NR_003000,NR_024349	chr17,chr17	+,-	SCARNA21,LOC284023	-8554,457
chr3:15369479-15369883	chr3	+	15369580	15369916	True	NM_033083,NM_004844	chr3,chr3	+,-	EAF1,SH3BP5	99147,4238
chr6:83893728-83895202	chr6	+	83893976	83895129	True	NM_001199917,NM_001199918,NM_001199919,NM_015599,NM_033411	chr6,chr6,chr6,chr6,chr6	-,-,-,-,+	PGM3,PGM3,PGM3,PGM3,RWDD2A	8589,7946,7946,7946,7902
chr7:28997289-28997578	chr7	+	28997364	28997488	True	NM_014817,NM_004067	chr7,chr7	-,+	TRIL,CHN2	591,236632
chr2:42990218-42990479	chr2	+	42990270	42990508	True	NM_148962,NM_020744	chr2,chr2	-,+	OXER1,MTA3	943,-194650
chr16:28943940-28944241	chr16	+	28943965	28944289	True	NM_024816,NM_001770,NM_001178098	chr16,chr16,chr16	-,+,+	RABEP2,CD19,CD19	-7433,-756,-756
chr11:108421125-108421796	chr11	+	108421142	108421815	True	NM_015065,NM_004398	chr11,chr11	-,+	EXPH5,DDX10	42620,114000
chr17:76027102-76027638	chr17	+	76027302	76027630	True	NM_018996,NM_001127198	chr17,chr17	+,-	TNRC6C,TMC6	-27036,97281
chr17:73852398-73852966	chr17	+	73852397	73852931	True	NM_012478,NM_001080419	chr17,chr17	-,+	WBP2,UNK	-896,-71773
chr1:33786469-33786859	chr1	+	33786536	33786858	True	NR_037400,NM_152493	chr1,chr1	-,+	MIR3605,ZNF362	11285,-64413
chr1:48317849-48318239	chr1	+	48317957	48318257	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	144355,370099
chr4:111118789-111119003	chr4	+	111118842	111119050	True	NM_001130721,NM_024090,NM_001977	chr4,chr4,chr4	-,-,+	ELOVL6,ELOVL6,ENPEP	771,820,278178
chr20:62798183-62798592	chr20	+	62798368	62798594	True	NM_004535,NM_005286	chr20,chr20	+,-	MYT1,NPBWR2	-2592,-60184
chr18:11982513-11983678	chr18	+	11982903	11983680	True	NM_023075,NM_014214	chr18,chr18	-,+	MPPE1,IMPA2	-74262,-1534
chr11:71158768-71159049	chr11	+	71158774	71158958	True	NM_018161,NM_001360,NM_001163817	chr11,chr11,chr11	+,-,-	NADSYN1,DHCR7,DHCR7	5258,569,569
chr4:68717240-68717987	chr4	+	68717280	68718004	True	NR_015439,NM_004262	chr4,chr4	+,-	LOC550112,TMPRSS11D	-150336,31762
chrX:47714415-47716063	chrX	+	47714703	47715810	True	NM_007137,NM_001007088	chrX,chrX	+,-	ZNF81,ZNF182	-18453,147630
chr12:132416234-132416536	chr12	+	132416405	132416496	True	NM_175066,NM_001002020,NM_025215,NM_001002019	chr12,chr12,chr12,chr12	-,+,+,+	DDX51,PUS1,PUS1,PUS1	212441,-2718,-2650,-2665
chr14:74815756-74815995	chr14	+	74815794	74815958	True	NR_003256,NM_018228	chr14,chr14	-,+	ABCD4,VRTN	-46027,-679
chr7:76255449-76256039	chr7	+	76255481	76256008	True	NR_029411,NM_152992,NM_012230	chr7,chr7,chr7	+,-,-	LOC100133091,POMZP3,POMZP3	-76874,662,662
chr7:76255449-76256039	chr7	+	75070874	75070962	False	NM_001099415,NR_033322	chr7,chr7	-,+	POM121C,NSUN5P1	44656,-31301
chr5:95170829-95171591	chr5	+	95170857	95171527	True	NR_026936,NM_002064	chr5,chr5	+,-	C5orf27,GLRX	16408,-12280
chr12:131718846-131719344	chr12	+	131718957	131719040	True	NR_026670,NM_194356	chr12,chr12	+,-	LOC116437,STX2	-69457,-395146
chr17:6732324-6733848	chr17	+	6732611	6733881	True	NR_002710,NM_053285	chr17,chr17	+,-	ALOX12P2,TEKT1	23013,1229
chr4:84254301-84255603	chr4	+	84254391	84255441	True	NM_001166498,NM_006665,NM_001098540,NM_001199830,NM_016067	chr4,chr4,chr4,chr4,chr4	-,-,-,-,+	HPSE,HPSE,HPSE,HPSE,MRPS18C	915,915,643,575,121676
chr1:1112984-1113659	chr1	+	1112986	1113662	True	NR_029834,NM_153254,NM_001130045,NR_029957,NM_004195	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	MIR200A,TTLL10,TTLL10,MIR429,TNFRSF18	-9794,1414,-3751,-8652,28477
chr6:33381217-33381536	chr6	+	33381265	33381566	True	NM_002636,NM_001014838,NM_006772,NM_001014433,NM_001014837,NM_001014840,NM_024165,NR_027692,NM_015921	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	+,-,+,-,-,-,+,+,-	PHF1,CUTA,SYNGAP1,CUTA,CUTA,CUTA,PHF1,PHF1,CUTA	-2543,4549,6280,4549,4549,4549,-2543,-2543,4549
chr6:33381217-33381536	chr6_ssto_hap7	+	4861513	4861814	False	NM_002636,NM_001014838,NM_006772,NM_001014433,NM_001014837,NM_001014840,NM_024165,NR_027692	chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7	+,-,+,-,-,-,+,+	PHF1,CUTA,SYNGAP1,CUTA,CUTA,CUTA,PHF1,PHF1	-2543,4547,6278,4547,4547,4547,-2543,-2543
chr16:836396-836968	chr16	+	836515	836931	True	NM_001025190,NM_058192,NM_022092	chr16,chr16,chr16	-,-,+	MSLNL,RPUSD1,CHTF18	-3589,1502,1690
chr1:248801857-248802482	chr1	+	248801954	248802460	True	NM_001001827,NM_001013355	chr1,chr1	-,+	OR2T35,OR2G6	149,-117057
chr1:248801857-248802482	chr1	-	248616197	248616706	False	NM_001004694,NM_001004136	chr1,chr1	-,+	OR2T29,OR2T2	106118,-149
chr13:111972685-111973697	chr13	+	111972827	111973626	True	NM_152324,NM_017664	chr13,chr13	+,-	C13orf16,ANKRD10	-53,-405411
chr4:174537883-174539325	chr4	+	174537939	174539338	True	NR_003679,NM_006792	chr4,chr4	+,-	NBLA00301,MORF4	-86388,-145
chr5:10759124-10759459	chr5	+	10759314	10759408	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-194941,2029
chr8:87513824-87514948	chr8	+	87514079	87514949	True	NM_003909,NM_016033	chr8,chr8	+,-	CPNE3,FAM82B	11706,6115
chr19:5783881-5784380	chr19	+	5784051	5784375	True	NM_020175,NM_001134316,NM_001161619,NM_004558	chr19,chr19,chr19,chr19	-,-,-,+	DUS3L,PRR22,DUS3L,NRTN	6924,451,6924,39442
chr2:230934006-230935104	chr2	+	230934055	230934529	True	NM_174899,NM_152527	chr2,chr2	+,-	FBXO36,SLC16A14	-146899,-340
chr17:47288239-47288567	chr17	+	47288283	47288603	True	NM_016428,NM_001198756,NM_001198755,NM_001198754,NM_001135186,NM_031498	chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,-,+,-	ABI3,GNGT2,GNGT2,GNGT2,ABI3,GNGT2	-745,-1521,-1521,-347,-745,-1540
chr20:62716111-62716347	chr20	+	62716272	62716360	True	NM_182647,NM_001007125,NM_001039467,NM_001200019,NM_000913,NM_005873	chr20,chr20,chr20,chr20,chr20,chr20	+,-,-,+,+,-	OPRL1,C20orf201,RGS19,OPRL1,OPRL1,RGS19	-4852,-560,-4948,8,-4852,-5427
chr8:82601662-82603539	chr8	+	82601713	82603054	True	NM_152284,NM_005536,NM_001144879,NM_001144878,NM_001010893	chr8,chr8,chr8,chr8,chr8	+,-,-,-,-	CHMP4C,IMPA1,IMPA1,IMPA1,SLC10A5	41633,-3124,-3124,-3124,4212
chr17:76225762-76226496	chr17	+	76226106	76226179	True	NR_002219,NM_001204210,NM_001204211,NM_001204212	chr17,chr17,chr17,chr17	-,+,+,+	EPR1,TMEM235,TMEM235,TMEM235	-5323,1211,1211,1211
chr3:100116947-100117845	chr3	+	100117542	100117854	True	NM_014820,NM_001085451	chr3,chr3	-,+	TOMM70A,LNP1	2421,2182
chr1:241521168-241522473	chr1	+	241521307	241522442	True	NM_002924,NM_003679	chr1,chr1	-,+	RGS7,KMO	-829,173237
chr14:51341209-51342011	chr14	+	51341420	51342050	True	NM_181533,NM_181814,NM_182944	chr14,chr14,chr14	+,+,-	ABHD12B,ABHD12B,NIN	-2602,-2602,-43581
chr12:49991104-49991562	chr12	+	49991264	49991408	True	NM_012272,NR_027450,NM_032130	chr12,chr12,chr12	+,-,-	PRPF40B,FAM186B,FAM186B	25994,8052,8075
chrX:13771006-13772259	chrX	+	13771089	13772067	True	NM_014563,NM_003611	chrX,chrX	-,+	TRAPPC2,OFD1	-18335,-18308
chr4:15442190-15442482	chr4	+	15442372	15442478	True	NM_001193534,NM_031911	chr4,chr4	-,+	FBXL5,C1QTNF7	214607,-12807
chr21:32125963-32127492	chr21	+	32126799	32127459	True	NM_181617,NM_001128077,NM_181619	chr21,chr21,chr21	-,+,-	KRTAP21-2,KRTAP20-3,KRTAP21-1	-7279,-111674,295
chr12:57612681-57613466	chr12	+	57612766	57613338	True	NM_020142,NM_007224	chr12,chr12	-,+	NDUFA4L2,NXPH4	21187,-2239
chr22:31686181-31686854	chr22	+	31686445	31686781	True	NM_001135911,NM_052880,NM_016733	chr22,chr22,chr22	-,-,+	PIK3IP1,PIK3IP1,LIMK2	1789,1789,-42150
chr2:160919046-160919361	chr2	+	160919071	160919405	True	NM_001195641,NM_022826,NM_007366,NM_001007267	chr2,chr2,chr2,chr2	-,+,-,-	PLA2R1,MARCH7,PLA2R1,PLA2R1	55,-350112,55,55
chr15:48008965-48009430	chr15	+	48008964	48009359	True	NM_016132,NM_024966,NM_153617,NM_153616,NM_153619,NM_153618,NM_020858	chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,+,+,+,+,+,+	MYEF2,SEMA6D,SEMA6D,SEMA6D,SEMA6D,SEMA6D,SEMA6D	461249,1326,1326,1326,1326,1326,1326
chr22:39020264-39021114	chr22	+	39020538	39021034	True	NM_001002880,NM_001013647	chr22,chr22	+,-	CBY1,LOC646851	31623,31650
chr8:87538313-87538951	chr8	+	87538486	87538669	True	NM_016033,NM_003909	chr8,chr8	-,+	FAM82B,CPNE3	-17477,-11892
chr7:23749789-23750159	chr7	+	23749923	23750175	True	NM_031414,NM_032944,NR_002711,NM_001122833	chr7,chr7,chr7,chr7	+,+,-,+	STK31,STK31,CLK2P,STK31	-136,-11,-123777,-136
chr12:121085461-121086955	chr12	+	121085747	121086833	True	NM_031205,NM_001033677,NM_198202,NM_004276	chr12,chr12,chr12,chr12	+,+,-,+	CABP1,CABP1,POP5,CABP1	1537,-7376,-66546,1537
chr14:100626497-100627059	chr14	+	100626605	100627053	True	NM_003403,NM_206918	chr14,chr14	+,-	YY1,DEGS2	78048,-593
chr12:122716965-122717440	chr12	+	122717064	122717365	True	NM_030765,NR_024600,NM_138929,NM_019887,NR_024601	chr12,chr12,chr12,chr12,chr12	+,-,-,-,-	B3GNT4,DIABLO,DIABLO,DIABLO,DIABLO	-28899,-4996,-4996,-4996,-4996
chr7:98744056-98745133	chr7	+	98744368	98745126	True	NM_020429,NM_001199847,NR_002147,NM_181349	chr7,chr7,chr7,chr7	-,-,+,-	SMURF1,SMURF1,MYH16,SMURF1	-2625,-2625,125797,-2625
chr1:89613031-89613326	chr1	+	89613163	89613378	True	NM_198460,NM_004120	chr1,chr1	+,-	GBP6,GBP2	216057,-21364
chr9:35910962-35912926	chr9	+	35911003	35912738	True	NR_024283,NM_001004487,NM_001039792	chr9,chr9,chr9	+,-,+	LOC158376,OR13J1,HRCT1	-1574,-40605,-4865
chr9:37468514-37469886	chr9	+	37468824	37469655	True	NM_022490,NM_014872	chr9,chr9	+,-	POLR1E,ZBTB5	16289,-3417
chr12:51321814-51322412	chr12	+	51321969	51322431	True	NM_014033,NM_001174130	chr12,chr12	+,-	METTL7A,SLC11A2	-3487,80672
chr1:10508241-10508505	chr1	+	10508245	10508409	True	NM_004401,NM_001302	chr1,chr1	-,+	DFFA,CORT	24254,1366
chrX:33034316-33034979	chrX	+	33034651	33035040	True	NM_004007,NM_152631	chrX,chrX	-,+	DMD,FAM47B	3340,1925872
chr15:83184663-83186236	chr15	+	83185639	83185705	True	NR_026811,NR_033936,NR_033579	chr15,chr15,chr15	-,-,+	LOC80154,LOC727849,LOC440297	-2738,-2709,-55657
chr15:83184663-83186236	chr15	+	82801063	82801129	False	NR_026811,NR_033936,NR_033579	chr15,chr15,chr15	-,-,+	LOC80154,LOC727849,LOC440297	-2740,-2711,-47667
chr3:139260536-139262050	chr3	+	139260801	139261871	True	NM_001130992,NM_020191,NM_001130993,NM_002899	chr3,chr3,chr3,chr3	-,+,-,-	RBP1,MRPS22,RBP1,RBP1	-2130,-197995,-2130,-2130
chr14:69681718-69682609	chr14	+	69682081	69682644	True	NM_003861,NR_034165	chr14,chr14	-,+	DCAF5,EXD2	-62167,-23662
chr7:123172210-123172428	chr7	+	123172209	123172469	True	NM_080928,NM_178827	chr7,chr7	+,-	ASB15,IQUB	76642,2299
chr1:55679962-55680176	chr1	+	55680005	55680141	True	NM_015306,NM_174936	chr1,chr1	-,+	USP24,PCSK9	948,-174907
chr2:29091792-29092550	chr2	+	29092149	29092521	True	NM_017910,NM_015131	chr2,chr2	-,+	TRMT61B,WDR43	704,25011
chr3:69863764-69863967	chr3	+	69863847	69864003	True	NM_015123,NM_006722	chr3,chr3	-,+	FRMD4B,MITF	-428417,-50946
chr12:108155109-108156017	chr12	+	108155109	108156038	True	NM_012406,NM_203436	chr12,chr12	-,+	PRDM4,ASCL4	-195,12123
chr2:48945902-48946181	chr2	+	48945906	48946185	True	NM_000233,NM_006872	chr2,chr2	-,+	LHCGR,GTF2A1L	36746,-101020
chr11:57534726-57535396	chr11	+	57534747	57535271	True	NM_001085468,NM_001085469,NM_001085459,NM_001085458,NM_001085462,NM_001085463,NM_001085460,NM_001085461,NM_001085466,NM_001085467,NM_001085464,NM_001085465,NM_001331,NM_001145101	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,+,+,+,+,+,+,+,+,-	CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,BTBD18	-5565,-5565,-5565,-5565,-5565,-5565,-5565,-5565,-5565,-5565,-5565,-5565,-5565,-15494
chr9:34611278-34611785	chr9	+	34611281	34611507	True	NM_000155,NM_024348,NM_148178,NM_148179,NM_007234	chr9,chr9,chr9,chr9,chr9	+,-,-,-,-	GALT,DCTN3,C9orf23,C9orf23,DCTN3	35127,9039,644,644,9039
chr3:9810063-9811405	chr3	+	9810295	9811131	True	NM_003656,NM_016829	chr3,chr3	-,+	CAMK1,OGG1	587,-18718
chr10:26505805-26506113	chr10	+	26505863	26506049	True	NM_001134366,NM_001012750,NM_000818	chr10,chr10,chr10	+,-,+	GAD2,ABI1,GAD2	-678,644017,-678
chr8:37444006-37444573	chr8	+	37444389	37444607	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	108693,161007
chr3:13462357-13462729	chr3	+	13462435	13462681	True	NM_024827,NM_024923	chr3,chr3	+,-	HDAC11,NUP210	59033,-626
chr19:48308206-48308963	chr19	+	48308339	48308927	True	NM_198479,NM_000554	chr19,chr19	-,+	TPRX1,CRX	-1478,16171
chr6:123109739-123110546	chr6	+	123109794	123110332	True	NM_006714,NM_001446,NM_020755	chr6,chr6,chr6	+,+,-	SMPDL3A,FABP7,SERINC1	-52,-9200,-316842
chr11:12696863-12697156	chr11	+	12696899	12697087	True	NM_021961,NM_013253	chr11,chr11	+,-	TEAD1,DKK3	-981,-665982
chr11:107729060-107729464	chr11	+	107729140	107729424	True	NM_017515,NM_017516	chr11,chr11	-,+	SLC35F2,RAB39	540,69852
chr7:112724307-112725860	chr7	+	112724372	112725844	True	NM_001146266,NM_001146267,NM_018970,NM_001146265,NM_182597	chr7,chr7,chr7,chr7,chr7	-,-,-,-,+	GPR85,GPR85,GPR85,GPR85,C7orf53	599,748,2039,2039,-603357
chr17:9808372-9808769	chr17	+	9808393	9808815	True	NM_004246,NM_002903	chr17,chr17	+,-	GLP2R,RCVRN	-79063,75
chr17:33907797-33908722	chr17	+	33907892	33908194	True	NR_003037,NM_001282,NM_001030006,NM_000286	chr17,chr17,chr17,chr17	+,+,+,-	SNORD7,AP2B1,AP2B1,PEX12	-7273,6087,6087,-2236
chr19:49496977-49497467	chr19	+	49497055	49497497	True	NR_027763,NM_006666,NM_002103,NM_001161587	chr19,chr19,chr19,chr19	-,+,-,-	GYS1,RUVBL2,GYS1,GYS1	-445,2,-445,-445
chrX:137820700-137821242	chrX	+	137820720	137821267	True	NM_033642,NR_028597	chrX,chrX	-,+	FGF13,SRD5A1P1	299,707710
chr12:57431684-57432520	chr12	+	57431802	57432447	True	NM_007264,NM_005379	chr12,chr12	+,-	GPR182,MYO1A	-43498,11497
chr4:140584534-140586394	chr4	+	140584533	140585837	True	NM_002413,NM_001204366,NM_001204367,NM_001204368,NM_030648	chr4,chr4,chr4,chr4,chr4	+,+,+,+,-	MGST2,MGST2,MGST2,MGST2,SETD7	1084,1084,1084,1084,-106956
chr8:144449841-144450047	chr8	+	144449907	144450077	True	NR_026785,NM_052924	chr8,chr8	-,+	C8orf51,RHPN1	778,947
chr1:26631098-26631731	chr1	+	26631248	26631581	True	NM_001803,NM_183008,NM_001077262	chr1,chr1,chr1	+,-,-	CD52,UBXN11,UBXN11	12829,1671,1671
chr11:33560401-33561236	chr11	+	33560421	33561271	True	NM_012194,NM_001166692	chr11,chr11	+,-	C11orf41,C11orf91	2605,161065
chr6:76728420-76729860	chr6	+	76728646	76729468	True	NM_001563,NM_004999	chr6,chr6	-,+	IMPG1,MYO6	52917,-269798
chr3:183355605-183355861	chr3	+	183355733	183355905	True	NM_130446,NM_017644	chr3,chr3	-,+	KLHL6,KLHL24	-82234,-2373
chr15:75283836-75284238	chr15	+	75284002	75284096	True	NM_001178111,NM_017793,NM_001178112,NR_033660,NM_138967	chr15,chr15,chr15,chr15,chr15	+,-,+,+,+	SCAMP5,RPP25,SCAMP5,SCAMP5,SCAMP5	3779,-34227,3779,3779,3779
chr22:22019157-22019751	chr22	+	22019316	22019744	True	NM_148175,NM_148176,NM_014337,NM_001017964	chr22,chr22,chr22,chr22	+,+,+,-	PPIL2,PPIL2,PPIL2,YDJC	528,528,528,-34976
chr17:43863074-43864300	chr17_ctg5_hap1	-	1003180	1004409	False	NM_001145146,NM_001145147,NR_024559,NM_004382,NM_001145148	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	-,-,+,-,-	CRHR1,CRHR1,LOC100128977,CRHR1,CRHR1	1525,1525,-108537,1525,1525
chr17:43863074-43864300	chr17	+	43863119	43864346	True	NM_001145146,NM_001145147,NR_024559,NM_004382,NM_001145148	chr17,chr17,chr17,chr17,chr17	+,+,-,+,+	CRHR1,CRHR1,LOC100128977,CRHR1,CRHR1	-1525,-1525,108583,-1525,-1525
chr19:45543790-45544144	chr19	+	45543801	45543971	True	NM_145288,NM_007056	chr19,chr19	-,+	ZNF296,CLASRP	35767,-1554
chr10:96442217-96443381	chr10	+	96442217	96443377	True	NM_022451,NM_000772,NM_001128925	chr10,chr10,chr10	-,+,+	NOC3L,CYP2C18,CYP2C18	-319534,-127,-127
chr10:101992463-101993022	chr10	+	101992506	101993061	True	NM_005063,NR_002954,NM_001278	chr10,chr10,chr10	+,-,-	SCD,SNORA12,CHUK	113710,4048,-3162
chr21:45524052-45524779	chr21	+	45524289	45524725	True	NM_005049,NM_015259	chr21,chr21	+,-	PWP2,ICOSLG	2482,136159
chr5:176731958-176732500	chr5	+	176731969	176732177	True	NM_130781,NM_001142935,NM_013237,NM_031300,NM_001031677	chr5,chr5,chr5,chr5,chr5	-,-,+,-,-	RAB24,MXD3,PRELID1,MXD3,RAB24	-1225,7165,-1185,7165,-1225
chr3:129723164-129724800	chr11	-	71348024	71348078	False	NM_001012710,NM_001005405	chr11,chr11	+,-	KRTAP5-10,KRTAP5-11	-71466,-54103
chr3:129723164-129724800	chr3	+	129724096	129724418	True	NM_007117,NR_024252	chr3,chr3	+,-	TRH,LOC729375	-31033,105908
chr3:88199851-88201632	chr3	+	88200100	88201256	True	NM_173824,NM_001195308	chr3,chr3	+,-	C3orf38,CGGBP1	-1263,-1084
chr1:153412286-153414093	chr1	+	153412304	153413817	True	NM_001045479,NM_176823	chr1,chr1	-,+	S100A7L2,S100A7A	199,-23355
chr16:29816959-29817383	chr16	+	29816979	29817291	True	NM_001042539,NM_145239,NM_002383,NM_006319	chr16,chr16,chr16,chr16	+,+,+,-	MAZ,PRRT2,MAZ,CDIPT	563,6117,563,57337
chrX:1714132-1714461	chrY	+	1664275	1664435	False	NM_004043,NR_027383,NM_005088,NM_178129	chrY,chrY,chrY,chrY	+,+,+,-	ASMT,AKAP17A,AKAP17A,P2RY8	14,-3841,-3841,-58238
chrX:1714132-1714461	chrX	+	1714275	1714435	True	NM_004043,NR_027383,NM_005088,NM_178129	chrX,chrX,chrX,chrX	+,+,+,-	ASMT,AKAP17A,AKAP17A,P2RY8	14,-3841,-3841,-58238
chr2:98613162-98613448	chr2	+	98613436	98613496	True	NM_015348,NM_144992	chr2,chr2	-,+	TMEM131,VWA3B	-1082,90098
chr18:28977845-28978703	chr18	+	28978161	28978725	True	NM_177986,NM_024421	chr18,chr18	+,-	DSG4,DSC1	-21473,-235342
chr20:23421745-23422537	chr20	+	23421745	23422517	True	NM_080830,NM_138283	chr20,chr20	-,+	CST11,CSTL1	11015,-1480
chr17:45283594-45284427	chr17	+	45283612	45284430	True	NM_002476,NM_001002841,NM_001256	chr17,chr17,chr17	+,+,-	MYL4,MYL4,CDC27	2283,1997,-16947
chr16:29283727-29284289	chr16	+	29283776	29284178	True	NR_002939,NM_001031827	chr16,chr16	+,-	RUNDC2C,BOLA2	18362,182157
chr16:29283727-29284289	chr16	+	88279778	88279929	False	NM_001127464,NM_001739	chr16,chr16	+,-	ZNF469,CA5A	213949,-309666
chr4:2011757-2012111	chr4	+	2011856	2012080	True	NM_005663,NM_001168243	chr4,chr4	-,+	WHSC2,C4orf48	-897,31639
chr18:9911546-9911823	chr18	+	9911559	9911840	True	NM_194434,NM_005134,NM_003574	chr18,chr18,chr18	+,-,+	VAPA,PPP4R1,VAPA	2114,-296959,2114
chr19:29383780-29384223	chr19	+	29383782	29384269	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	71768,319922
chr8:23557711-23559468	chr8	+	23557918	23559483	True	NM_016612,NM_001136271	chr8,chr8	+,-	SLC25A37,NKX2-6	-171609,4489
chr10:23383600-23384523	chr10	+	23383643	23384111	True	NM_012228,NM_153714	chr10,chr10	+,-	MSRB2,C10orf67	315,249711
chr17:75373779-75374202	chr17	+	75373848	75374124	True	NM_001113494,NM_001113493,NR_036200	chr17,chr17,chr17	+,+,-	SEPT9,SEPT9,MIR4316	-1734,-4627,19062
chr11:8061491-8061698	chr11	+	8061525	8061631	True	NM_003320,NM_176821	chr11,chr11	+,-	TUB,NLRP10	-1396,-76466
chr11:3081165-3081768	chr11	+	3081330	3081668	True	NM_001194997,NR_027138,NM_001014437,NR_036542,NM_139273,NM_001751,NM_002555	chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,+,-,-,-,-,+	CARS,C11orf36,CARS,CARS,CARS,CARS,SLC22A18	-2649,157893,-2649,-2649,-2649,-2649,-157869
chr19:35606077-35606400	chr19	+	35606101	35606169	True	NM_001136012,NM_001136010,NM_001136011,NM_021910,NR_024562,NR_024561,NM_001136009,NM_001136008,NM_001136007,NM_005971	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,-,-,+,+,+,+	FXYD3,FXYD3,FXYD3,FXYD3,LOC100128675,LOC100128675,FXYD3,FXYD3,FXYD3,FXYD3	562,562,562,562,-8893,-8926,562,562,562,562
chr17:33446337-33446542	chr17	+	33446342	33446580	True	NM_002878,NR_037711,NR_037712,NR_037714,NM_133629,NM_017559,NM_001142571	chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,+,-	RAD51L3,RAD51L3,RAD51L3,RAD51L3-RFFL,RAD51L3,FNDC8,RAD51L3	358,358,358,2011,358,2050,358
chr12:53207440-53207803	chr12	+	53207618	53207800	True	NM_199187,NM_002272	chr12,chr12	+,-	KRT18,KRT4	134854,585
chr16:79736831-79738563	chr16	+	79736921	79738524	True	NM_005360,NM_130897	chr16,chr16	-,+	MAF,DYNLRB2	-102299,836329
chr13:25255563-25255886	chr13	+	25255705	25255874	True	NM_001185085,NM_006437,NM_001676	chr13,chr13,chr13	+,-,+	ATP12A,PARP4,ATP12A	-1207,-168757,-1207
chr1:161991925-161992131	chr1	+	161991969	161992037	True	NM_001164757,NM_015441	chr1,chr1	+,-	NOS1AP,OLFML2B	47543,1657
chr12:116997142-116997752	chr12	+	116997273	116997781	True	NM_001085481,NM_024738	chr12,chr12	+,-	MAP1LC3B2,C12orf49	-138,178112
chr17:43591440-43592649	chr17_ctg5_hap1	-	1483733	1483799	False	NR_002940,NM_016632	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LRRC37A4,ARL17A	-2423,30151
chr17:43591440-43592649	chr17_ctg5_hap1	+	203772	203838	False	NM_001113738,NR_027782	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	ARL17A,PLEKHM1	-8118,-20558
chr17:43591440-43592649	chr17_ctg5_hap1	+	421692	421758	False	NM_001039083,NR_002940	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	ARL17B,LRRC37A4	-30147,2423
chr17:43591440-43592649	chr17	+	43591488	43592698	True	NR_002940,NR_037772	chr17,chr17	-,+	LRRC37A4,CRHR1	5241,105011
chr17:43591440-43592649	chr17	+	43595481	43596691	False	NR_002940,NR_037772	chr17,chr17	-,+	LRRC37A4,CRHR1	1248,101018
chr17:43591440-43592649	chr17	-	45126614	45127827	False	NM_203400,NM_054022	chr17,chr17	-,+	RPRML,GOSR2	-70000,-126179
chr17:43591440-43592649	chr17	-	44409026	44409092	False	NM_001103154,NM_014834	chr17,chr17	-,+	ARL17B,LRRC37A	30108,-36596
chr17:43591440-43592649	chr17	-	44626888	44626954	False	NM_001006607,NM_016632	chr17,chr17	+,-	LRRC37A2,ARL17A	-36879,30200
chr6:41744090-41745882	chr6	+	41744407	41745693	True	NM_001134493,NM_013397,NM_006653	chr6,chr6,chr6	+,+,-	TOMM6,PRICKLE4,FRS3	9487,2806,1994
chr8:145723535-145723977	chr8	+	145723638	145724010	True	NM_032902,NM_005309,NM_004260	chr8,chr8,chr8	+,+,-	PPP1R16A,GPT,RECQL4	-1580,5454,19250
chr6:164739264-164741264	chr6	+	164739442	164741182	True	NM_206855,NR_037593	chr6,chr6	+,-	QKI,LOC100526820	-903818,-904460
chr8:143823130-143823444	chr8	+	143823244	143823408	True	NM_016647,NM_020427	chr8,chr8	+,-	C8orf55,SLURP1	-14674,471
chr19:55587839-55588885	chr19	+	55588134	55588875	True	NM_133180,NM_138412,NM_017729	chr19,chr19,chr19	+,-,+	EPS8L1,RDH13,EPS8L1	-965,-7220,2884
chr19:58086384-58087098	chr19	+	58086442	58087039	True	NM_001010879,NM_017879	chr19,chr19	+,-	ZIK1,ZNF416	8588,3255
chr10:70167664-70168117	chr10	+	70167765	70167933	True	NM_001042417,NM_021644,NM_017987	chr10,chr10,chr10	-,+,-	RUFY2,HNRNPH3,RUFY2	-714,-76048,-819
chr15:81616792-81617251	chr15	+	81616797	81617269	True	NM_181900,NM_004513	chr15,chr15	-,+	STARD5,IL16	-273,-27594
chr1:244997164-244997568	chr1	+	244997163	244997605	True	NR_026778,NM_198076	chr1,chr1	-,+	NCRNA00201,FAM36A	12688,1033
chr19:5687468-5687686	chr19	+	5687524	5687646	True	NM_205767,NM_198708,NM_033643,NM_198533,NM_015414,NM_198706,NM_198707,NM_198704,NM_198705	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,+,+,+,+,+,+,+,+	C19orf70,HSD11B1L,RPL36,HSD11B1L,RPL36,HSD11B1L,HSD11B1L,HSD11B1L,HSD11B1L	-6613,-6500,2625,-6528,2699,-6500,-6523,-6540,-6540
chr5:140741735-140742015	chr5	+	140741822	140742064	True	NM_018924,NM_032097,NM_018923,NM_032096,NM_032054,NM_018918,NM_032053,NM_005642,NM_018917	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,+,-,+	PCDHGB3,PCDHGB3,PCDHGB2,PCDHGB2,PCDHGA5,PCDHGA5,PCDHGA4,TAF7,PCDHGA4	7897,7897,-2170,-2170,1833,1833,-7105,-41471,-7105
chr2:122040596-122041477	chr2	+	122040631	122041447	True	NR_023343,NM_014553	chr2,chr2	+,-	RNU4ATAC,TFCP2L1	247008,1381
chr11:57088145-57089305	chr11	+	57088414	57089168	True	NM_002559,NM_033396	chr11,chr11	+,-	P2RX3,TNKS1BP1	16780,3295
chr14:89021464-89022789	chr14	+	89021809	89022825	True	NM_207660,NM_207661,NM_001160104,NM_001160103,NM_007039,NM_024824	chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,+,-,+	ZC3H14,ZC3H14,ZC3H14,ZC3H14,PTPN21,ZC3H14	6427,6865,6427,6427,-686,6427
chr9:139259258-139259577	chr9	+	139259270	139259382	True	NM_052813,NM_001200003,NM_001080849,NM_052814	chr9,chr9,chr9,chr9	-,+,-,-	CARD9,GPSM1,DNLZ,CARD9	8801,-10069,-1029,8801
chrX:9434943-9435370	chrX	+	9434949	9435360	True	NM_001139466,NM_001139467,NM_005647,NM_001139468,NM_000273	chrX,chrX,chrX,chrX,chrX	+,+,+,+,-	TBL1X,TBL1X,TBL1X,TBL1X,GPR143	-3665,-3665,-1799,-3665,298695
chr11:696214-696789	chr11	+	696331	696411	True	NM_021008,NM_001042463,NM_174940,NM_022772	chr11,chr11,chr11,chr11	-,+,+,+	DEAF1,TMEM80,TMEM80,EPS8L2	-591,-766,-766,9708
chr5:272914-273464	chr5	+	272978	273362	True	NM_145265,NM_013232	chr5,chr5	-,+	CCDC127,PDCD6	-54681,-1302
chr5:272914-273464	chr5	-	1632626	1632686	False	NR_003713,NM_004553	chr5,chr5	-,+	LOC728613,NDUFS6	1484,168809
chr7:129073198-129073721	chr7	+	129073244	129073766	True	NM_020704,NM_001134336,NR_029614	chr7,chr7,chr7	+,+,-	FAM40B,FAM40B,MIR182	507,507,336616
chr1:17867485-17868384	chr1	+	17867536	17867985	True	NM_018125,NM_018715	chr1,chr1	+,-	ARHGEF10L,RCC2	-1257,-101316
chr8:23083291-23083692	chr8	+	23083298	23083606	True	NR_033928,NM_003844	chr8,chr8	+,-	LOC389641,TNFRSF10A	-615,-618
chr16:2590690-2591348	chr16	+	2590736	2591130	True	NM_001048212,NR_036139,NM_031268,NM_002613	chr16,chr16,chr16,chr16	-,-,+,+	CEMP1,MIR3178,PDPK1,PDPK1	-9327,-8730,-2817,-2817
chr16:2590690-2591348	chr16	-	2720572	2720910	False	NM_031948,NM_018992	chr16,chr16	-,+	PRSS27,KCTD5	49692,11584
chrX:114252549-114254511	chrX	+	114252661	114254531	True	NM_000640,NM_001145346	chrX,chrX	-,+	IL13RA2,RBMXL3	-454,169431
chr20:46412932-46413327	chr20	+	46412968	46413276	True	NM_018837,NM_198596,NM_181659,NM_001161841	chr20,chr20,chr20,chr20	-,-,+,-	SULF2,SULF2,NCOA3,SULF2	1582,2134,-282418,2134
chr18:11365186-11365708	chr18	+	11365187	11365753	True	NM_022068,NM_182978	chr18,chr18	-,+	FAM38B,GNAL	-216426,323382
chr2:41368742-41370059	chr2	+	41368752	41369949	True	NR_033996,NM_001112802	chr2,chr2	+,-	LOC388942,SLC8A1	734745,-629177
chr4:104099415-104100276	chr4	+	104099415	104100256	True	NM_001813,NM_001008388	chr4,chr4	-,+	CENPE,CISD2	19361,-309332
chr15:93187727-93188070	chr15	+	93187849	93188028	True	NR_033769,NM_207446	chr15,chr15	+,-	ASB9P1,FAM174B	150685,11054
chr14:75179824-75180876	chr14	+	75179831	75180817	True	NM_015962,NM_001039479	chr14,chr14	+,-	FCF1,KIAA0317	-32,-24
chr2:207618829-207620822	chr2	+	207618897	207620753	True	NM_014929,NM_001039845,NM_001136194,NM_001136193	chr2,chr2,chr2,chr2	+,-,+,+	FASTKD2,MDH1B,FASTKD2,FASTKD2	9358,9348,9358,9358
chr3:184017321-184017569	chr3	+	184017410	184017488	True	NM_033259,NM_002808	chr3,chr3	-,+	CAMK2N2,PSMD2	-38159,-439
chr6:34760939-34762269	chr6	+	34760999	34762300	True	NM_005643,NM_017754	chr6,chr6	-,+	TAF11,UHRF1BP1	93576,-1258
chr12:48965326-48966143	chr12	+	48965513	48966063	True	NM_001005203,NM_002289	chr12,chr12	+,-	OR8S1,LALBA	-46156,-1684
chr19:56250650-56251021	chr19	+	56250680	56250792	True	NM_001145014,NM_176820	chr19,chr19	+,-	RFPL4A,NLRP9	19714,-912
chr18:23671100-23671309	chr18	+	23671116	23671330	True	NM_001007559,NM_001025096,NM_005637	chr18,chr18,chr18	-,+,-	SS18,PSMA8,SS18	-505,42485,-505
chr18:18821568-18822127	chr18	+	18821614	18821932	True	NM_005406,NM_001142966	chr18,chr18	-,+	ROCK1,GREB1L	-129802,270
chr19:3063967-3064637	chr19	+	3064252	3064512	True	NM_002067,NM_198970,NM_198969,NM_001130	chr19,chr19,chr19,chr19	+,-,-,-	GNA11,AES,AES,AES	29895,-1881,-1288,-1881
chr17:59485989-59486678	chr17	+	59486090	59486551	True	NM_199290,NM_005994,NM_203425	chr17,chr17,chr17	-,+,+	NACA2,TBX2,C17orf82	182071,-8884,2560
chr16:57728954-57730377	chr16	+	57729015	57730173	True	NM_001130099,NM_032269	chr16,chr16	-,+	KIFC3,CCDC135	101806,-353
chrX:48818884-48819914	chrX	+	48818899	48819829	True	NM_004979,NM_017602,NM_001136159,NM_001136158,NM_001167992,NM_001136157	chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,+,-	KCND1,OTUD5,OTUD5,OTUD5,PQBP1,OTUD5	8472,-4006,-3251,-4006,-63175,-4006
chr12:49050885-49051693	chr12	+	49051222	49051740	True	NR_031623,NR_002950,NR_029448,NR_002951,NR_002968	chr12,chr12,chr12,chr12,chr12	-,-,+,-,-	MIR1291,SNORA2A,LOC255411,SNORA2B,SNORA34	-2909,-657,69477,9686,-2921
chr16:84732474-84733227	chr16	+	84732534	84733201	True	NM_005153,NM_021149	chr16,chr16	+,-	USP10,COTL1	353,-80865
chr4:15779707-15779997	chr4	+	15779707	15779897	True	NR_036464,NM_001775	chr4,chr4	-,+	FBXL5,CD38	-122672,33
chr19:50195722-50196113	chr19	+	50195895	50195982	True	NM_001101340,NM_001136052,NM_001571,NM_152359,NM_001199752,NM_001199753	chr19,chr19,chr19,chr19,chr19,chr19	+,+,-,+,+,+	C19orf76,CPT1C,IRF3,CPT1C,CPT1C,CPT1C	-4005,-1582,-26763,-1582,-1582,-1582
chrX:72220037-72220816	chrX	+	72220036	72220778	True	NR_026595,NM_001042506	chrX,chrX	-,+	NCRNA00246,PABPC1L2B	-56447,2573
chrX:72220037-72220816	chrX	-	72301922	72302664	False	NM_001042506,NM_001012977	chrX,chrX	+,-	PABPC1L2B,PABPC1L2A	-78621,-2571
chr1:144932759-144933140	chr1	+	144932758	144933158	True	NM_004892,NM_001002811	chr1,chr1	+,-	SEC22B,PDE4DIP	163248,-726
chr7:132936416-132937100	chr7	+	132936688	132937085	True	NM_001037126,NM_021807,NM_017812	chr7,chr7,chr7	+,+,-	EXOC4,EXOC4,CHCHD3	737,737,-169860
chr10:126481796-126482153	chr10	+	126481818	126482144	True	NM_032182,NM_212554	chr10,chr10	+,-	FAM175B,METTL10	8209,-1379
chr2:110704099-110704601	chr2	+	110704422	110704626	True	NR_037627,NR_036225,NR_027142,NR_027143	chr2,chr2,chr2,chr2	+,-,+,+	LOC100288570,MIR4267,LOC440895,LOC440895	640,123043,640,640
chr2:110704099-110704601	chr2	+	111002370	111002574	False	NR_027063,NR_037626	chr2,chr2	-,+	NCRNA00116,LOC100507334	-21853,640
chr2:110704099-110704601	chr2	-	111182033	111182237	False	NR_037626,NR_037627,NR_027142,NR_027143	chr2,chr2,chr2,chr2	+,-,-,-	LOC100507334,LOC100288570,LOC440895,LOC440895	-178869,-640,-640,-640
chr1:117112750-117113135	chr1	+	117112832	117112992	True	NM_001779,NM_001144822,NR_031564,NR_026665	chr1,chr1,chr1,chr1	-,-,+,-	CD58,CD58,MIR320B1,CD58	773,773,101378,773
chr9:131462493-131464134	chr9	+	131462497	131464167	True	NM_013355,NM_032799	chr9,chr9	+,-	PKN3,ZDHHC12	634,22291
chr3:148847847-148848112	chr3	+	148847876	148848140	True	NM_032383,NM_139048	chr3,chr3	+,-	HPS3,HLTF	-556,-43535
chr5:177435705-177437276	chr5	+	177435985	177437306	True	NM_006261,NM_001079527	chr5,chr5	-,+	PROP1,FAM153C	-12742,-350
chr5:177435705-177437276	chr5	-	177206525	177207846	False	NR_003615,NM_173663	chr5,chr5	+,-	LOC728554,FAM153A	94415,-288
chr5:177435705-177437276	chr5	+	175490370	175491693	False	NM_032361,NM_001079529	chr5,chr5	-,+	THOC3,FAM153B	-94825,20215
chr3:130097536-130098212	chr3	+	130097635	130098252	True	NR_024252,NR_022012	chr3,chr3	-,+	LOC729375,COL6A5	-267359,-33328
chr11:67503642-67503936	chr11	+	67503779	67503841	True	NM_007103,NM_001031615	chr11,chr11	+,-	NDUFV1,ALDH3B2	-129507,-55094
chr11:1643285-1644180	chr11	+	1643405	1643923	True	NM_001012709,NM_001001480	chr11,chr11	-,+	KRTAP5-4,KRTAP5-5	-37,7109
chr16:3495432-3497134	chr16	+	3495610	3496776	True	NM_001083601,NM_152457	chr16,chr16	+,-	NAT15,ZNF597	-1994,-2120
chr6:132149307-132149854	chr6	+	132149321	132149789	True	NM_006208,NM_001145659	chr6,chr6	+,-	ENPP1,CTAGE9	-20216,-117164
chr14:76447005-76447814	chr14	+	76447120	76447715	True	NM_001102564,NM_052873,NM_003239	chr14,chr14,chr14	+,+,-	C14orf179,C14orf179,TGFB3	4380,4380,428
chr7:74938163-74939114	chr7	+	74938854	74938914	True	NR_003614,NR_003664	chr7,chr7	-,+	PMS2L2,SPDYE8P	49351,-2372
chr10:98499731-98500800	chr10	+	98499927	98500779	True	NM_152309,NM_001170765	chr10,chr10	-,+	PIK3AP1,LCOR	-19648,91237
chr20:48183340-48184005	chr20	+	48183376	48183863	True	NM_015266,NM_000961	chr20,chr20	+,-	SLC9A8,PTGIS	245386,895
chr5:69344403-69344707	chr5	+	69344647	69344713	True	NM_022876,NM_022877,NM_022874,NM_022875,NM_000344,NM_017411,NR_024054	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,-	SMN2,SMN2,SMN1,SMN2,SMN1,SMN2,LOC100170939	636,636,636,636,636,636,176959
chr5:69344403-69344707	chr5	+	70220058	70220124	False	NM_022876,NM_022877,NM_022874,NM_022875,NM_000344,NM_017411,NM_004536	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,-	SMN2,SMN2,SMN1,SMN2,SMN1,SMN2,NAIP	643,643,643,643,643,643,100867
chr10:112062244-112064215	chr10	+	112062350	112064196	True	NM_005962,NM_005871	chr10,chr10	+,-	MXI1,SMNDC1	-76646,561
chr3:48632554-48633142	chr3	+	48632572	48633016	True	NM_000094,NM_033629	chr3,chr3	-,+	COL7A1,TREX1	21,-125394
chrX:17877911-17878573	chrX	+	17878078	17878548	True	NM_006746,NM_001172739,NM_001172732,NR_033349,NR_033348,NM_021785,NM_001172743	chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,-,-,-,-,-,-	SCML1,RAI2,RAI2,RAI2,RAI2,RAI2,RAI2	-122541,959,959,449,449,959,959
chr6:147524286-147524812	chr6	+	147524333	147524760	True	NM_001127715,NM_139244,NR_034115	chr6,chr6,chr6	+,+,-	STXBP5,STXBP5,LOC729178	747,747,1040
chr2:8976626-8977189	chr2	+	8976793	8977170	True	NM_020738,NM_002166	chr2,chr2	-,+	KIDINS220,ID2	635,-154732
chr16:66599841-66600096	chr16	+	66599840	66600097	True	NM_181270,NM_181271,NM_181272,NM_181283,NM_181268,NM_181296,NM_004614,NM_181269,NM_052999	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,+,-,+,+	CMTM1,CMTM1,CMTM1,CMTM1,CMTM1,CMTM1,TK2,CMTM1,CMTM1	196,196,196,196,252,196,-15525,196,252
chr14:23450079-23450378	chr14	+	23450251	23450379	True	NM_001099780,NM_198086,NM_032876	chr14,chr14,chr14	+,-,-	PSMB11,JUB,JUB	60996,-3819,1519
chr1:92683676-92683916	chr1	+	92683678	92683949	True	NM_053274,NM_001012425	chr1,chr1	-,+	GLMN,C1orf146	80667,-156
chrX:151919499-151920134	chrX	+	151919530	151920062	True	NM_001129826,NM_004909,NM_005361,NM_175742,NM_001129828,NM_175743,NM_153488,NM_001080848	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,-,-,+,-,-,+	CSAG3,CSAG2,MAGEA2,MAGEA2,CSAG3,MAGEA2,MAGEA2B,CSAG2	7748,7671,2352,2352,7671,2352,87,7671
chrX:151919499-151920134	chrX	-	151885420	151885952	False	NM_001129826,NM_004909,NM_005361,NM_175742,NM_001129828,NM_175743,NM_153488,NM_001080848	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,+,+,-,+,+,-	CSAG3,CSAG2,MAGEA2,MAGEA2,CSAG3,MAGEA2,MAGEA2B,CSAG2	-7750,-7673,-2352,-2352,-7673,-2352,-87,-7673
chr20:45144967-45146106	chr20	+	45145291	45146049	True	NM_018102,NM_030777,NM_199441	chr20,chr20,chr20	-,+,-	ZNF334,SLC2A10,ZNF334	-3097,192229,-3097
chr3:185303986-185304251	chr3	+	185304055	185304247	True	NM_021627,NM_139248	chr3,chr3	+,-	SENP2,LIPH	-75,-33686
chr11:64513621-64513934	chr11	+	64513624	64513908	True	NM_001098671,NM_001098670,NM_153378,NM_153819	chr11,chr11,chr11,chr11	-,-,+,-	RASGRP2,RASGRP2,SLC22A12,RASGRP2	-1994,-1295,-155393,-696
chr16:50100602-50100984	chr16	+	50100668	50100852	True	NM_182922,NM_015069	chr16,chr16	+,-	HEATR3,ZNF423	-838,-239750
chr6:144467608-144467852	chr6	+	144467725	144467827	True	NM_031287,NM_003764	chr6,chr6	-,+	SF3B5,STX11	-50971,3826
chr1:223740055-223740661	chr1	+	223740104	223740382	True	NM_001146068,NM_001143962	chr1,chr1	+,-	CAPN2,CAPN8	148912,113104
chr1:223740055-223740661	chr9	+	138939609	138939887	False	NM_015597,NM_144653	chr9,chr9	+,-	GPSM1,NACC2	282044,47294
chr2:43041998-43043640	chr2	+	43042013	43043204	True	NM_020744,NM_012205	chr2,chr2	+,-	MTA3,HAAO	-246393,-22262
chr2:15700436-15701195	chr2	+	15700486	15700744	True	NM_004939,NM_015909	chr2,chr2	+,-	DDX1,NBAS	31025,760
chr17:30185520-30185808	chr17	+	30185539	30185659	True	NM_018405,NM_015355	chr17,chr17	-,+	C17orf79,SUZ12	717,78384
chr2:179737231-179737607	chr2	+	179737394	179737649	True	NM_019091,NM_133379	chr2,chr2	+,-	PLEKHA3,TTN	-392255,-65244
chr16:67915417-67916396	chr16	+	67915424	67916412	True	NM_014329,NM_025082,NM_198443	chr16,chr16,chr16	+,-,+	EDC4,CENPT,NRN1L	-8476,-34063,2368
chr1:156828913-156829188	chr1	+	156829082	156829154	True	NM_001012331,NM_002529,NM_014215	chr1,chr1,chr1	+,+,-	NTRK1,NTRK1,INSRR	1516,1516,-370
chr3:195444484-195445509	chr3	+	195444719	195445443	True	NM_001098516,NM_004532,NM_152673	chr3,chr3,chr3	+,-,+	MUC20,MUC4,MUC20	5654,93759,2309
chr3:3167351-3167634	chr3	+	3167350	3167495	True	NM_175727,NM_182916	chr3,chr3	-,+	IL5RA,TRNT1	-15292,1104
chr1:45451734-45452036	chr1	+	45451941	45452067	True	NM_000374,NM_020365,NM_001166588	chr1,chr1,chr1	+,-,-	UROD,EIF2B3,EIF2B3	25737,344,344
chr17:67419317-67420274	chr17	+	67419494	67420254	True	NM_172232,NM_002758	chr17,chr17	-,+	ABCA5,MAP2K6	-96171,-8707
chr5:140011528-140011901	chr5	+	140011597	140011915	True	NM_001040021,NM_000591,NM_018502,NM_001174104,NM_001174105	chr5,chr5,chr5,chr5,chr5	-,-,+,-,-	CD14,CD14,TMCO6,CD14,CD14	1421,1170,7096,1421,1421
chr17:60217151-60217444	chr19	+	629550	629608	False	NM_005035,NM_020637	chr19,chr19	-,+	POLRMT,FGF22	4010,10317
chr17:60217151-60217444	chr17	+	60217154	60217356	True	NM_001144933,NM_005121	chr17,chr17	+,-	EFCAB3,MED13	230222,-74511
chr22:35884286-35885414	chr22	+	35884285	35885455	True	NM_005368,NM_014310	chr22,chr22	-,+	MB,RASD2	127979,51896
chr20:32952928-32953311	chr20	+	32953032	32953146	True	NM_031483,NM_001161766	chr20,chr20	+,-	ITCH,AHCY	-2028,-53424
chr20:15256130-15256928	chr20	+	15256129	15256707	True	NR_037841,NM_001033087	chr20,chr20	-,+	NCRNA00186,MACROD2	-345968,-78679
chrX:64768394-64769730	chrX	+	64768519	64769696	True	NM_001010888,NR_033742	chrX,chrX	+,-	ZC3H12B,FKSG43	-59956,2655
chr3:52915690-52916106	chr3	+	52915734	52916077	True	NM_001198974,NM_002217	chr3,chr3	-,+	TMEM110-MUSTN1,ITIH3	15571,-87001
chr6:143266991-143267346	chr6	+	143267052	143267324	True	NM_016108,NM_006734	chr6,chr6	+,-	AIG1,HIVEP2	114698,-714
chr11:102483625-102484089	chr11	+	102483776	102484076	True	NM_001166,NM_004771	chr11,chr11	+,-	BIRC2,MMP20	-265865,12037
chr5:114599341-114600867	chr5	+	114599342	114600507	True	NM_005023,NM_001284	chr5,chr5	-,+	PGGT1B,AP3S1	-773,577111
chr11:118960059-118961065	chr11	+	118960240	118961012	True	NM_000190,NM_001024382,NM_002105	chr11,chr11,chr11	+,+,-	HMBS,HMBS,H2AFX	-4704,-1594,5219
chr8:62212323-62212732	chr8	+	62212420	62212758	True	NR_034003,NM_173519	chr8,chr8	-,+	LOC100130298,CLVS1	-332113,-11946
chr7:56118184-56118591	chr7	+	56118262	56118545	True	NM_001762,NM_004577,NR_002957,NM_001009186	chr7,chr7,chr7,chr7	+,-,+,+	CCT6A,PSPH,SNORA15,CCT6A	832,778,9617,832
chr19:57792710-57794214	chr19	+	57792872	57794032	True	NM_001012729,NM_006635	chr19,chr19	-,+	DUXA,ZNF460	-114016,-1074
chr15:81072561-81072894	chr15	+	81072572	81072902	True	NM_018689,NR_030393	chr15,chr15	+,-	KIAA1199,MIR549	-911,61562
chrX:144324381-144325149	chrX	+	144324589	144325173	True	NR_030589,NM_001009614	chrX,chrX	-,+	MIR890,SPANXN1	750752,3933
chr6:87864716-87864952	chr6	+	87864725	87864879	True	NM_000735,NM_015021	chr6,chr6	-,+	CGA,ZNF292	-59901,389
chrX:21770928-21772774	chrX	+	21771052	21772810	True	NM_015884,NM_014332	chrX,chrX	+,-	MBTPS2,SMPX	84845,3472
chr20:38903107-38904612	chr20	+	38903508	38904531	True	NM_003286,NM_005461	chr20,chr20	+,-	TOP1,MAFB	752930,413395
chr1:15254584-15254799	chr1	+	15254589	15254669	True	NM_001018000,NM_001018001,NR_027136	chr1,chr1,chr1	+,+,-	KAZN,KAZN,C1orf126	-4015,1626,224341
chr1:155912617-155913071	chr1	+	155912632	155913090	True	NM_014949,NM_181885	chr1,chr1	-,+	KIAA0907,RXFP4	-8444,-1203
chr3:50245240-50245989	chr3	+	50245263	50246034	True	NM_006764,NM_006841	chr3,chr3	-,+	IFRD2,SLC38A3	84042,-2622
chr10:89093260-89094293	chr10	+	89093453	89094035	True	NR_024397,NR_029408	chr10,chr10	-,+	LOC728190,LOC439994	8330,8132
chr10:89093260-89094293	chr10	+	81571851	81571901	False	NR_029407,NM_003019	chr10,chr10	+,-	LOC642361,SFTPD	13756,137010
chr2:47167163-47167469	chr2	+	47167205	47167499	True	NM_001171508,NM_020458,NM_001171511	chr2,chr2,chr2	-,+,-	MCFD2,TTC7A,MCFD2	1545,813,1545
chr5:36153047-36154981	chr5	+	36153094	36155017	True	NR_030306,NM_001007527,NM_005983,NM_032637	chr5,chr5,chr5,chr5	-,-,+,+	MIR580,LMBRD2,SKP2,SKP2	-5004,-1079,-956,-956
chr2:171077931-171078567	chr2	+	171078004	171078610	True	NM_138995,NM_014168	chr2,chr2	+,-	MYO3B,METTL5	-43409,-396651
chr16:29827698-29827922	chr16	+	29827791	29827961	True	NM_017458,NM_024516,NM_005115,NM_006319,NM_145239,NM_001042539,NM_002383	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,-,+,+,+	MVP,C16orf53,MVP,CDIPT,PRRT2,MAZ,MAZ	3753,-314,3753,46667,-4433,-9987,-9987
chr14:66959351-66959984	chr14	+	66959369	66960029	True	NM_015994,NR_024338,NR_024339	chr14,chr14,chr14	-,+,+	ATP6V1D,NCRNA00238,NCRNA00238	866749,-6319,-6319
chr5:146838183-146839393	chr5	+	146838227	146839393	True	NM_001387,NM_001112724	chr5,chr5	-,+	DPYSL3,STK32A	-4967,-223699
chr1:1166131-1166603	chr1	+	1166169	1166600	True	NM_080605,NM_016547,NM_016176	chr1,chr1,chr1	+,-,-	B3GALT6,SDF4,SDF4	1028,897,897
chr15:34635397-34636277	chr15	+	34635477	34635942	True	NM_133647,NM_018648,NM_001042497,NM_175741,NM_001042495,NM_001042496,NM_001042494	chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,-,+,-,-,-	SLC12A6,NOP10,SLC12A6,C15orf55,SLC12A6,SLC12A6,SLC12A6	-6432,-115,-6432,2123,-5212,-5516,-5516
chr3:126273405-126275062	chr3	+	126273437	126274917	True	NM_152533,NM_152889	chr3,chr3	-,+	C3orf22,CHST13	2891,-30312
chr15:78933557-78934343	chr15	+	78933884	78934388	True	NM_000745,NM_000750	chr15,chr15	+,-	CHRNA5,CHRNB4	-76073,-297
chr5:147438553-147439078	chr5	+	147438600	147439084	True	NM_001127698,NM_001127699,NM_206966,NM_006846	chr5,chr5,chr5,chr5	+,+,-,+	SPINK5,SPINK5,C5orf46,SPINK5	4450,4450,-152499,4450
chr22:51037627-51037962	chr22	+	51037741	51037866	True	NM_016431,NM_012324,NM_005198	chr22,chr22,chr22	+,+,-	MAPK8IP2,MAPK8IP2,CHKB	3695,1264,-16313
chr19:44509197-44509895	chr19	+	44509425	44509714	True	NM_006300,NM_003425	chr19,chr19	+,-	ZNF230,ZNF45	-2399,-70014
chr11:32798809-32800077	chr11	+	32799059	32800042	True	NM_001008391,NM_024081	chr11,chr11	-,+	CCDC73,PRRG4	16195,51446
chr17:1961522-1961782	chr17	+	1961529	1961747	True	NM_006497,NM_001098202,NR_029674,NR_029625	chr17,chr17,chr17,chr17	+,+,-,-	HIC1,HIC1,MIR132,MIR212	-3187,-1976,-8227,-7855
chr5:122422905-122423194	chr5	+	122422906	122423227	True	NM_001136239,NM_000943	chr5,chr5	+,-	PRDM6,PPIC	1613,-50481
chr3:49057201-49057496	chr3	+	49057223	49057507	True	NM_001009996,NM_199074,NM_199073,NR_029948,NM_199070,NM_000884,NR_029690,NM_018114,NM_199069	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,+,-,+,-,-,-,+	DALRD3,NDUFAF3,NDUFAF3,MIR425,NDUFAF3,IMPDH2,MIR191,DALRD3,NDUFAF3	-1206,400,1110,210,1566,9418,685,1010,1566
chr17:4903438-4903659	chr17	+	4903437	4903655	True	NM_001167986,NM_001167987,NM_006612,NM_001167985,NM_213726	chr17,chr17,chr17,chr17,chr17	-,-,+,-,-	INCA1,INCA1,KIF1C,INCA1,INCA1	-2532,-2532,-2245,-2532,-2532
chr6:34189315-34191046	chr6	+	34189509	34191077	True	NM_002131,NM_001008703	chr6,chr6	+,-	HMGA1,C6orf1	13499,25877
chr5:139026761-139027002	chr5	+	139026880	139027007	True	NM_016463,NM_198282	chr5,chr5	+,-	CXXC5,TMEM173	1293,-164537
chr17:5487750-5488160	chr17	+	5487809	5488199	True	NM_014922,NM_024039,NM_033004,NM_033007,NM_033006,NM_001033053	chr17,chr17,chr17,chr17,chr17,chr17	-,+,-,-,-,-	NLRP1,MIS12,NLRP1,NLRP1,NLRP1,NLRP1	23,-97613,23,23,23,23
chr9:32780005-32780523	chr9	+	32780092	32780560	True	NM_212558,NM_153809	chr9,chr9	+,-	TMEM215,TAF1L	2936,-144425
chr20:49410522-49410778	chr20	+	49410632	49410802	True	NM_198799,NM_015339,NM_017843,NM_001010974	chr20,chr20,chr20,chr20	+,-,+,+	BCAS4,ADNP,BCAS4,BCAS4	664,136775,664,664
chr1:114467870-114469571	chr1	+	114468376	114469415	True	NM_152696,NM_198268,NM_006594	chr1,chr1,chr1	+,+,-	HIPK1,HIPK1,AP4B1	2580,2580,-20635
chr3:42946770-42947496	chr3	+	42946770	42947418	True	NM_207404,NM_004391,NM_001134656	chr3,chr3,chr3	+,-,+	ZNF662,CYP8B1,ZNF662	1,-29137,239
chr11:75429526-75430889	chr11	+	75429762	75430844	True	NM_025098,NM_207577	chr11,chr11	+,-	MOGAT2,MAP6	-879,-50283
chr2:169314382-169315887	chr2	+	169314385	169315925	True	NM_203463,NM_013233	chr2,chr2	+,-	LASS6,STK39	-1602,-210280
chr6:14951773-14952469	chr6	+	14951932	14952326	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	294200,711013
chr3:128995757-128996143	chr3	+	128995962	128996146	True	NM_006026,NM_001006109,NM_020187	chr3,chr3,chr3	-,+,+	H1FX,C3orf37,C3orf37	39024,1670,1537
chr20:34130014-34130597	chr20	+	34130098	34130613	True	NM_015966,NM_198398,NM_001145350	chr20,chr20,chr20	+,+,-	ERGIC3,ERGIC3,C20orf173	-371,-371,-12617
chr10:115805758-115806860	chr10	+	115806016	115806901	True	NM_000684,NR_031747	chr10,chr10	+,-	ADRB1,MIR2110	-2261,127089
chr2:109741060-109741938	chr2	+	109741190	109741970	True	NR_029193,NM_001099289	chr2,chr2	-,+	LOC100287216,SH3RF3	4655,4026
chr18:22013456-22014649	chr18	+	22013925	22014401	True	NM_018439,NM_080597	chr18,chr18	+,-	IMPACT,OSBPL1A	-7374,-36135
chr3:10051055-10051492	chr3	+	10051133	10051394	True	NM_001008737,NM_033084	chr3,chr3	-,+	LOC401052,FANCD2	1435,16718
chr3:10051055-10051492	chr3	+	11953211	11953261	False	NM_138807,NM_003178	chr3,chr3	-,+	C3orf31,SYN2	-64859,92600
chr19:54973604-54973916	chr19	+	54973678	54973882	True	NM_198988,NM_052925	chr19,chr19	-,+	LENG9,LENG8	1062,-13664
chr1:154583387-154584962	chr1	+	154583387	154584658	True	NM_015841,NM_015840,NM_001193495,NM_000748,NM_001111	chr1,chr1,chr1,chr1,chr1	-,-,-,+,-	ADAR,ADAR,ADAR,CHRNB2,ADAR	-2663,-2663,-4611,-43181,-2663
chr14:96157184-96157640	chr14	+	96157188	96157680	True	NM_001098725,NM_004918	chr14,chr14	-,+	TCL1A,TCL1B	22903,-4485
chr3:137764452-137765160	chr3	+	137764555	137765043	True	NM_016369,NM_001170538	chr3,chr3	+,-	CLDN18,DZIP1L	-35600,67329
chr21:30438782-30439076	chr21	+	30438898	30439092	True	NM_006585,NM_020152	chr21,chr21	-,+	CCT8,C21orf7	6975,13780
chr19:48442409-48442797	chr19	+	48442743	48442823	True	NR_024218,NR_024216,NR_004437,NM_001128326,NR_004435,NR_004436	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,-,+,+	SNAR-C4,SNAR-A13,SNAR-A12,BSPH1,SNAR-A1,SNAR-A2	2,5355,5355,52654,-5356,-5356
chr19:48442409-48442797	chr19	+	48453498	48453550	False	NR_024219,NR_024221,NR_024217,NR_024216,NR_024220,NR_004437,NM_001128326	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,+,-	SNAR-C5,SNAR-C3,SNAR-C2,SNAR-A13,SNAR-C1,SNAR-A12,BSPH1	5388,2,5388,-5370,5388,-5370,41927
chr19:48442409-48442797	chr19	+	48458884	48458964	False	NR_024219,NR_024220,NM_001128326,NR_024217,NR_024221	chr19,chr19,chr19,chr19,chr19	+,+,-,+,+	SNAR-C5,SNAR-C1,BSPH1,SNAR-C2,SNAR-C3	2,2,36513,2,-5382
chr19:48442409-48442797	chr19	+	48432040	48432100	False	NR_024219,NR_024220,NR_024223,NR_024224,NR_024225,NR_024226,NR_024227,NR_024228,NR_024229,NR_024215,NR_024214,NR_024217,NM_003167,NR_004436,NR_004435,NR_024242	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,+,+,+,+,+,+,+,-,+,+,+	SNAR-C5,SNAR-C1,SNAR-A5,SNAR-A7,SNAR-A11,SNAR-A9,SNAR-A6,SNAR-A8,SNAR-A10,SNAR-A4,SNAR-A3,SNAR-C2,SULT2A1,SNAR-A2,SNAR-A1,SNAR-A14	-16,-16,-5055,-5055,-5055,-5055,-5055,-5055,-5055,-5055,-5055,-16,-42386,5337,5337,-5055
chr19:48442409-48442797	chr19	+	48416253	48416333	False	NR_024219,NR_024220,NR_024217,NR_024216,NM_003167,NR_004437,NR_004436,NR_004435	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,-,+,+,+	SNAR-C5,SNAR-C1,SNAR-C2,SNAR-A13,SULT2A1,SNAR-A12,SNAR-A2,SNAR-A1	2,2,2,-5369,-26599,-5369,5352,5352
chr1:24882197-24882400	chr1	+	24882237	24882427	True	NM_001199012,NM_001010980	chr1,chr1	-,+	C1orf201,C1orf130	-140650,139
chr14:53251939-53253024	chr14	+	53251966	53252951	True	NM_198066,NM_145251	chr14,chr14	-,+	GNPNAT1,STYX	5492,-55142
chr19:51532578-51532849	chr19	+	51532586	51532884	True	NM_145894,NM_145895,NM_145888,NM_002776,NM_001136032,NM_019598,NM_001077500,NM_001167605,NM_006853,NM_144947,NM_014441	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,-,-,-,+	KLK12,KLK12,KLK10,KLK10,KLK11,KLK12,KLK10,KLK11,KLK11,KLK11,SIGLEC9	5316,5316,-9632,-9304,-2714,5316,-9155,-1296,-1296,-1701,95252
chr1:192601690-192602282	chr1	+	192601766	192602251	True	NM_002927,NM_001199261,NM_144766	chr1,chr1,chr1	+,-,+	RGS13,UCHL5,RGS13	3016,426323,3016
chr9:70599135-70600393	chr9	+	70599920	70600001	True	NM_201453	chr9	-	CBWD3	-109743
chr9:70599135-70600393	chr9	+	42205092	42205173	False	NR_003670,NM_001012421	chr9,chr9	-,+	KGFLP2,ANKRD20A2	-185508,163129
chr9:70599135-70600393	chr9	-	45488370	45488435	False	NM_001145196,NR_024060	chr9,chr9	-,+	FAM75A6,FAM27A	-1857640,238593
chr9:70599135-70600393	chr9	-	45874610	45874691	False	NM_001145196,NR_024060	chr9,chr9	-,+	FAM75A6,FAM27A	-2243880,-147639
chr1:225996690-225997726	chr1	+	225996750	225997640	True	NM_001136018,NM_014698	chr1,chr1	+,-	EPHX1,TMEM63A	156,72830
chr16:67978448-67978881	chr16	+	67978530	67978874	True	NM_006742,NM_002801,NM_000229	chr16,chr16,chr16	+,-,-	PSKH1,PSMB10,LCAT	-51406,-7750,-515
chrX:120180921-120181289	chrX	+	120180954	120181296	True	NM_001080146,NM_012084	chrX,chrX	-,+	CT47A1,GLUD2	-61316,165
chr1:153280283-153280561	chr1	+	153280289	153280459	True	NM_052891,NM_000427	chr1,chr1	-,+	PGLYRP3,LOR	2785,-48161
chr6:43024503-43024908	chr6	+	43024699	43024791	True	NM_015950,NM_001168370,NM_014780,NM_201521,NM_201523,NM_201522,NM_138343	chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,+,+,+,+	MRPL2,CUL7,CUL7,KLC4,KLC4,KLC4,KLC4	2509,-3016,-3016,2580,2837,3390,2580
chr7:6618990-6620403	chr7	+	6619138	6620290	True	NM_024067,NM_001134387,NM_001145118,NM_001134388,NM_001134389,NM_018106	chr7,chr7,chr7,chr7,chr7,chr7	+,+,-,+,+,+	C7orf26,ZDHHC4,GRID2IP,ZDHHC4,ZDHHC4,ZDHHC4	9624,-2124,-28071,-2124,-2124,-2124
chrX:13342935-13344243	chrX	+	13342998	13344225	True	NM_001167890,NM_001135995	chrX,chrX	+,-	EGFL6,ATXN3L	243468,-4480
chr15:90644435-90645191	chr15	+	90644573	90645014	True	NM_002168,NM_020210	chr15,chr15	-,+	IDH2,SEMA4B	744,83137
chr17:42994261-42996148	chr17	+	42994429	42996192	True	NM_001131019,NM_213607,NM_002055	chr17,chr17,chr17	-,+,-	GFAP,CCDC103,GFAP	-1515,-17326,-1515
chr7:45961560-45962466	chr7	+	45961762	45962224	True	NM_000596,NM_000598,NM_001013398	chr7,chr7,chr7	+,-,-	IGFBP1,IGFBP3,IGFBP3	-33861,-891,-891
chr12:31945062-31945587	chr12	+	31945101	31945634	True	NM_001135863,NM_001013699	chr12,chr12	+,-	METTL20,H3F3C	-132543,-2
chr6:136611863-136613067	chr6	+	136611862	136612582	True	NM_001077441,NM_001077440,NM_018945,NM_014739	chr6,chr6,chr6,chr6	-,-,+,-	BCLAF1,BCLAF1,PDE7B,BCLAF1	-873,-873,-439079,-873
chr4:159150311-159150999	chr4	+	159150432	159150970	True	NM_001128424,NM_018342	chr4,chr4	-,+	FAM198B,TMEM144	-56230,-19082
chr12:79187511-79187823	chr12	+	79187659	79187802	True	NM_001135805,NM_002583	chr12,chr12	+,-	SYT1,PAWR	69970,897039
chr19:9324501-9324969	chr19	+	9324535	9324987	True	NM_001005191,NM_175883	chr19,chr19	-,+	OR7D4,OR7D2	610,-28316
chrX:16964352-16964624	chrX	+	16964351	16964673	True	NM_004726,NM_002893,NM_001080975	chrX,chrX,chrX	+,-,+	REPS2,RBBP7,REPS2	140,-75817,140
chr3:157823830-157824110	chr3	+	157823901	157824159	True	NM_001163678,NM_003030,NM_006884,NM_016625	chr3,chr3,chr3,chr3	-,-,-,+	SHOX2,SHOX2,SHOX2,RSRC1	-29,-29,-29,3732
chr1:59166241-59167663	chr1	+	59166356	59167577	True	NR_034014,NM_001085487	chr1,chr1	+,-	LOC100131060,MYSM1	83245,-609
chr6:111275840-111277375	chr6	+	111275893	111276773	True	NM_138408,NR_002932	chr6,chr6	+,-	GTF3C6,GSTM2P1	2989,92034
chr6:150244069-150244439	chr6	+	150244192	150244372	True	NM_025217,NM_001001788	chr6,chr6	+,-	ULBP2,RAET1G	18763,-2
chr16:4525862-4526307	chr16	+	4525953	4526237	True	NM_002134,NM_001127206,NM_001127204,NM_020677	chr16,chr16,chr16,chr16	+,+,+,-	HMOX2,HMOX2,HMOX2,NMRAL1	103,-1285,103,-1057
chr22:38977603-38979268	chr22	+	38978368	38979175	True	NM_001002880,NM_007068	chr22,chr22	+,-	CBY1,DMC1	73482,-12179
chr1:43311685-43312257	chr1	+	43311728	43312250	True	NM_015911,NM_199342	chr1,chr1	+,-	ZNF691,CCDC23	29,-28669
chrX:30233879-30234358	chrX	+	30233966	30234376	True	NM_000475,NM_002364	chrX,chrX	-,+	NR0B1,MAGEB2	93169,-342
chr18:13620522-13621242	chr18	+	13620550	13621242	True	NM_001003675,NM_001003674,NM_001098801,NM_181483,NM_004338	chr18,chr18,chr18,chr18,chr18	+,+,-,+,+	C18orf1,C18orf1,C18orf19,C18orf1,C18orf1	-8936,-8936,105399,-2,-2
chr10:128996705-128997960	chr10	+	128996793	128997888	True	NM_001030013,NM_001039762	chr10,chr10	+,-	NPS,FAM196A	349724,-2371
chr9:34689789-34690033	chr9	+	34689793	34689971	True	NM_004512,NM_006274	chr9,chr9	+,-	IL11RA,CCL19	-35912,1353
chr3:50271782-50272127	chr3	+	50272080	50272166	True	NM_002070,NM_006764	chr3,chr3	+,-	GNAI2,IFRD2	1480,57910
chr19:45755033-45755258	chr19	+	45755111	45755253	True	NM_031417,NM_001199867,NM_138568	chr19,chr19,chr19	+,+,-	MARK4,MARK4,EXOC3L2	-646,-646,-17642
chr9:4286389-4287421	chr9	+	4286433	4287441	True	NM_001042413,NM_004170	chr9,chr9	-,+	GLIS3,SLC1A1	12644,202985
chr17:47489888-47491029	chr17	+	47489949	47490722	True	NM_002634,NM_002507	chr17,chr17	-,+	PHB,NGFR	1571,81932
chr12:96795307-96796338	chr12	+	96795444	96796013	True	NM_001170464,NM_002595,NM_005230	chr12,chr12,chr12	-,-,+	CDK17,CDK17,ELK3	-1078,-1078,-207297
chr13:50510614-50510838	chr13	+	50510658	50510886	True	NR_023351,NR_003268,NM_020456,NM_001127482	chr13,chr13,chr13,chr13	-,+,-,-	C13orf1,CTAGE10P,C13orf1,C13orf1	-33,-46164,-33,-33
chr15:59980295-59980680	chr15	+	59980297	59980709	True	NM_004751,NM_004330	chr15,chr15	+,-	GCNT3,BNIP2	-76366,983
chr17:77702699-77702987	chr17	+	77702765	77703035	True	NM_178543,NM_020649	chr17,chr17	+,-	ENPP7,CBX8	1846,67930
chr15:52264873-52265940	chr15	+	52265226	52265775	True	NM_138792,NM_002748	chr15,chr15	-,+	LEO1,MAPK6	-1268,45635
chr6:158585321-158586480	chr6	+	158585668	158586528	True	NM_207118,NM_032861	chr6,chr6	+,-	GTF2H5,SERAC1	2850,2834
chr6:44240574-44241756	chr6	+	44241022	44241684	True	NM_001137560,NM_004556	chr6,chr6	+,-	TMEM151B,NFKBIE	-2593,-7497
chr3:49713337-49713677	chr3	+	49713344	49713688	True	NM_001640,NM_020998	chr3,chr3	+,-	APEH,MST1	-1960,12558
chr22:25776767-25777325	chr22	+	25777069	25777291	True	NM_001135772,NR_029395	chr22,chr22	-,+	LRP5L,IGLL3P	303,-62897
chr10:104629926-104630239	chr10	+	104629935	104630257	True	NM_000102,NM_020682	chr10,chr10	-,+	CYP17A1,AS3MT	-32645,-776
chr15:25444133-25445506	chr15	+	25444179	25445459	True	NR_003344,NR_003358,NR_003313,NR_003312,NR_003311,NR_003310,NM_130838,NR_003297,NR_003308,NR_003309,NR_003351,NR_003314,NR_003301,NR_003302,NR_003303,NR_003304,NR_003305,NR_003306,NR_003307	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,-,+,+,+,+,+,+,+,+,+,+,+,+	SNORD115-29,SNORD115-43,SNORD115-21,SNORD115-20,SNORD115-19,SNORD115-18,UBE3A,SNORD115-5,SNORD115-16,SNORD115-17,SNORD115-36,SNORD115-22,SNORD115-9,SNORD115-10,SNORD115-11,SNORD115-12,SNORD115-13,SNORD115-14,SNORD115-15	-9669,-9669,5949,5949,1010,1010,205244,-7664,-37,1010,-9669,9605,-7667,-7667,-9669,-7667,-5762,-4162,5949
chr1:207196624-207198168	chr1	+	207196759	207198043	True	NM_023938,NM_001083924,NM_006212	chr1,chr1,chr1	-,-,+	C1orf116,C1orf116,PFKFB2	8108,8108,28576
chr19:8479455-8480002	chr19	+	8479492	8480008	True	NM_016496,NM_001005416,NM_001005415,NM_198471	chr19,chr19,chr19,chr19	+,+,+,-	MARCH2,MARCH2,MARCH2,KANK3	-1356,-1356,-1356,-71346
chr7:55710521-55711079	chr7	+	55710733	55711050	True	NM_182633,NR_027340	chr7,chr7	+,-	ZNF713,FKBP9L	269280,44734
chr3:188884680-188886082	chr3	+	188884808	188885974	True	NM_198485,NM_018192	chr3,chr3	+,-	TPRG1,LEPREL1	3788,952986
chr11:88931634-88932100	chr11	+	88931657	88931911	True	NM_000842,NM_000372	chr11,chr11	-,+	GRM5,TYR	-134841,-20679
chr12:49316853-49318807	chr12	+	49317036	49318774	True	NM_001143782,NM_001143781,NM_033124,NM_016594	chr12,chr12,chr12,chr12	-,-,+,-	FKBP11,FKBP11,CCDC65,FKBP11	606,-60,-19195,606
chr4:16899770-16900839	chr4	+	16899826	16900742	True	NM_001130834,NM_001079827,NM_001290	chr4,chr4,chr4	-,+,-	LDB2,CLRN2,LDB2	-268,616045,-268
chr12:113796784-113797707	chr12	+	113796977	113797615	True	NM_001159727,NM_173542,NM_024959	chr12,chr12,chr12	+,+,-	PLBD2,PLBD2,SLC24A6	-657,-657,-24052
chr3:12803942-12804215	chr3	+	12803945	12804134	True	NM_001162499,NM_018306	chr3,chr3	+,-	CAND2,TMEM40	34036,-3137
chr1:75137478-75139362	chr1	+	75137566	75139057	True	NM_001162916,NM_001002912	chr1,chr1	+,-	TYW3,C1orf173	59778,415
chr19:45449299-45449933	chr19	+	45449383	45449683	True	NM_001646,NM_001294,NR_037932,NM_000483,NM_001199468,NM_145288	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,-	APOC4,CLPTM1,APOC4-APOC2,APOC2,CLPTM1,ZNF296	-3947,8915,-3947,-203,8915,130055
chr1:19186785-19187226	chr1	+	19186982	19187252	True	NM_001135254,NM_152232	chr1,chr1	+,-	PAX7,TAS1R2	-229533,-827
chr6:26458519-26458893	chr6	+	26458556	26458720	True	NM_001197233,NM_001197234,NM_078476,NM_003543,NM_007049	chr6,chr6,chr6,chr6,chr6	+,+,+,-,+	BTN2A1,BTN2A1,BTN2A1,HIST1H4H,BTN2A1	-429,-454,-454,-172829,-454
chr6:26458519-26458893	chr6	+	26422118	26422170	False	NR_027795,NM_003543	chr6,chr6	+,-	BTN2A3,HIST1H4H	-552,-136391
chr1:206267349-206269032	chr1	+	206267381	206269081	True	NM_000707,NM_001007544	chr1,chr1	+,-	AVPR1B,C1orf186	-43149,19616
chr17:58678785-58678994	chr17	+	58678784	58679012	True	NM_003620,NM_006380	chr17,chr17	+,-	PPM1D,APPBP2	-1295,-75204
chr14:74015723-74017228	chr14	+	74015823	74017255	True	NM_203309,NM_001037161	chr14,chr14	-,+	HEATR4,ACOT1	8446,-11946
chr14:74015723-74017228	chr14	+	74048220	74049225	False	NM_152331,NM_203309	chr14,chr14	+,-	ACOT4,HEATR4	9184,-22569
chr7:26885407-26886319	chr7	+	26885639	26886268	True	NM_003930,NM_001145531	chr7,chr7	-,+	SKAP2,C7orf71	18129,-208213
chr5:141340508-141341579	chr5	+	141340600	141341367	True	NM_183399,NM_183398,NM_001201365,NM_016580,NM_183401,NM_183400,NM_004290	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,-,+,+,+	RNF14,RNF14,RNF14,PCDH12,RNF14,RNF14,RNF14	5034,7083,5034,-1973,7344,7083,7083
chrX:138623180-138624731	chrX	+	138623241	138624778	True	NM_000133,NM_001171877	chrX,chrX	+,-	F9,MCF2	-10397,100281
chr3:133650080-133651158	chr3	+	133650206	133651095	True	NM_021203,NM_025041	chr3,chr3	+,-	SRPRB,C3orf36	-147380,-1550
chr6:37467119-37467402	chr6	+	37467150	37467414	True	NM_015050,NM_138493	chr6,chr6	+,-	FTSJD2,C6orf129	-66300,336
chr5:139946897-139947155	chr5	+	139946913	139947145	True	NM_133172,NM_001035235,NM_133174,NM_133173,NM_080670,NM_006051	chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,+,-	APBB3,SRA1,APBB3,APBB3,SLC35A4,APBB3	-2724,-9235,-2724,-2724,-2544,-2724
chr16:14418167-14419263	chr16	+	14418349	14419064	True	NR_029854,NM_001134477	chr16,chr16	+,-	MIR365-1,PARN	-15265,305106
chr12:54757107-54757369	chr12	+	54757115	54757365	True	NR_029894,NM_020370	chr12,chr12	+,-	MIR148B,GPR84	-26166,955
chr14:102226802-102227127	chr14	+	102226891	102227063	True	NM_001161725,NM_001161726,NR_031649	chr14,chr14,chr14	+,+,-	PPP2R5C,PPP2R5C,MIR1247	1071,1071,-200132
chr7:43966356-43968174	chr7	+	43966658	43968152	True	NM_001077664,NM_015983	chr7,chr7	-,+	URGCP,UBE2D4	-662,-674
chr20:60694485-60694985	chr20	+	60694579	60694863	True	NM_144703,NM_002792	chr20,chr20	+,-	LSM14B,PSMA7	2653,23661
chr14:21135786-21136743	chr14	+	21135848	21136508	True	NM_001145,NM_001001968	chr14,chr14	+,-	ANG,OR6S1	15827,-25998
chr10:77164098-77164318	chr10	+	77164106	77164288	True	NM_032772,NR_024422,NR_024421	chr10,chr10,chr10	-,+,+	ZNF503,NCRNA00245,NCRNA00245	-2593,-643,-2871
chr1:34327100-34328549	chr1	+	34327164	34328561	True	NR_033264,NM_145205,NM_052896	chr1,chr1,chr1	+,+,-	HMGB4,HMGB4,CSMD2	1118,-1140,302933
chr11:30576248-30577685	chr11	+	30576414	30577705	True	NM_001584,NM_152316	chr11,chr11	-,+	MPPED2,C11orf46	24394,-231818
chr3:123679763-123679995	chr3	+	123679768	123680038	True	NR_028136,NM_022757	chr3,chr3	+,-	KALRN,CCDC14	133519,267
chr6:109192322-109193382	chr6	+	109192451	109193316	True	NM_001199934,NM_032131	chr6,chr6	-,+	SESN1,ARMC2	136926,-22885
chr10:103114069-103114363	chr10	+	103114180	103114402	True	NM_006562,NM_003939,NM_033637	chr10,chr10,chr10	-,+,+	LBX1,BTRC,BTRC	-125463,-406,-406
chr21:34709800-34710695	chr21	+	34709815	34709903	True	NM_000629,NM_006134	chr21,chr21	+,-	IFNAR1,TMEM50B	-12652,142442
chr1:157112685-157114272	chr1	+	157112792	157114290	True	NM_001145312,NR_001560,NM_005240	chr1,chr1,chr1	-,+,-	ETV3,CYCSP52,ETV3	-4409,-14702,-4615
chr17:33861605-33862968	chr17	+	33861618	33862169	True	NR_003037,NM_001129820	chr17,chr17	+,-	SNORD7,SLFN14	38506,22998
chr19:17448181-17448660	chr19	+	17448248	17448696	True	NM_133644,NM_001195422,NM_001128855,NM_020959,NM_032620	chr19,chr19,chr19,chr19,chr19	+,+,+,-,+	GTPBP3,GTPBP3,GTPBP3,ANO8,GTPBP3	-6,-2508,-6,-2610,-6
chr11:4629495-4630067	chr11	+	4629661	4630051	True	NM_018073,NM_001005169	chr11,chr11	-,+	TRIM68,OR52I1	-224,-14445
chr2:26914109-26914572	chr2	+	26914231	26914605	True	NM_002246,NM_001029881	chr2,chr2	+,-	KCNK3,CIB4	975,-50020
chr7:20242109-20243868	chr7	+	20242273	20243430	True	NM_182762,NM_002214	chr7,chr7	-,+	MACC1,ITGB8	13641,127294
chr13:111839784-111841563	chr13	+	111839793	111841391	True	NM_001113513,NM_017664	chr13,chr13	+,-	ARHGEF7,ANKRD10	-673,-272377
chr16:4163032-4163456	chr16	+	4163062	4163456	True	NM_001116,NM_032575	chr16,chr16	-,+	ADCY9,GLIS2	2780,218768
chr6:150263628-150264657	chr6	+	150263759	150264463	True	NM_025217,NM_001001788	chr6,chr6	+,-	ULBP2,RAET1G	-674,-19545
chr6:150263628-150264657	chr6	-	150243546	150243596	False	NM_025217,NM_001001788	chr6,chr6	+,-	ULBP2,RAET1G	19539,668
chr11:76813294-76814107	chr11	+	76813302	76814120	True	NM_182833,NM_006189	chr11,chr11	-,+	GDPD4,OMP	184393,-235
chr19:38268586-38269135	chr19	+	38268696	38269184	True	NM_001172689,NM_001172690,NM_001172691,NM_001172692,NM_015073,NM_152360	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,+,-	ZNF573,ZNF573,ZNF573,ZNF573,SIPA1L3,ZNF573	1096,1096,1096,1096,128683,1096
chr1:84987923-84988746	chr1	+	84987922	84988581	True	NR_036561,NM_005274	chr1,chr1	+,-	SPATA1,GNG5	-16010,-15660
chr17:14208361-14208701	chr17	+	14208448	14208740	True	NR_026880,NM_006041,NM_001007530	chr17,chr17,chr17	+,+,-	MGC12916,HS3ST3B1,CDRT15	-1442,-3993,-68298
chr1:152636832-152638306	chr1	+	152636926	152638306	True	NM_178429,NM_178430,NM_178431	chr1,chr1,chr1	+,+,-	LCE2C,LCE2D,LCE3A	9464,-1105,-41347
chr2:44004922-44005450	chr2	+	44004940	44005098	True	NM_015522,NM_022436,NM_001193464,NM_016008	chr2,chr2,chr2,chr2	+,-,+,+	DYNC2LI1,ABCG5,DYNC2LI1,DYNC2LI1	-3819,60920,-3819,-3819
chr17:30721189-30721581	chr17	+	30721429	30721494	True	NM_003457,NM_022344	chr17,chr17	+,-	ZNF207,C17orf75	-44329,-52240
chr2:216878417-216879005	chr2	+	216878453	216878979	True	NM_018000,NM_001142310	chr2,chr2	-,+	MREG,TMEM169	-107,67609
chr13:52586985-52587229	chr13	+	52586984	52587262	True	NR_036571,NM_000053,NM_001005918,NM_001004127	chr13,chr13,chr13,chr13	+,-,-,+	ALG11,ATP7B,ATP7B,ALG11	-517,-1354,-1354,-517
chr21:42213902-42214618	chr21	+	42214242	42214585	True	NM_001389,NR_036167	chr21,chr21	-,+	DSCAM,MIR3197	4505,324898
chr5:172090139-172090446	chr5	+	172090204	172090258	True	NM_001142651,NM_004417	chr5,chr5	+,-	NEURL1B,DUSP1	-21979,107995
chr9:140510795-140511656	chr9	+	140510929	140511533	True	NM_024757,NM_001145527	chr9,chr9	+,+	EHMT1,EHMT1	1910,1910
chr6:292794-293261	chr6	+	292801	293156	True	NM_020185,NM_148959	chr6,chr6	+,-	DUSP22,HUS1B	-751,363859
chr2:191271287-191272518	chr2	+	191271813	191272428	True	NM_017694,NM_198047	chr2,chr2	+,-	MFSD6,HIBCH	652,-87042
chr2:241396772-241397112	chr2	+	241396814	241397012	True	NR_024014,NR_029702	chr2,chr2	-,+	PP14571,MIR149	-697,-1447
chr17:39659947-39660218	chr17	+	39659949	39660033	True	NM_005801,NM_002274,NM_153490	chr17,chr17,chr17	+,-,-	EIF1,KRT13,KRT13	185093,1882,1882
chr5:149887785-149887995	chr5	+	149887785	149888007	True	NM_001025070,NM_001543	chr5,chr5	-,+	RPS14,NDST1	-58466,-162
chr9:5525203-5525768	chr9	+	5525407	5525496	True	NM_025239,NM_018465	chr9,chr9	+,-	PDCD1LG2,C9orf46	-14920,-87547
chr11:34379877-34380504	chr11	+	34380130	34380504	True	NM_001752,NM_145804	chr11,chr11	+,-	CAT,ABTB2	79967,-575
chr1:236306899-236307516	chr1	+	236307070	236307372	True	NM_002508,NM_003272	chr1,chr1	-,+	NID1,GPR137B	-78589,-1302
chr22:23870298-23871857	chr22	+	23870649	23871853	True	NM_153615,NM_020070	chr22,chr22	+,-	RGL4,IGLL1	161194,50692
chr3:50339731-50339943	chr3	+	50339904	50339984	True	NM_001200016,NM_001200029,NM_153281,NM_003549,NM_153282,NM_153283,NM_033159,NM_012191,NM_001200018,NM_153285,NM_007312,NM_001200030,NM_153215,NM_001200031,NM_006764,NM_001200032	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,-,-,-,-,-,-,-,-,+,-,-,-	NAT6,HYAL3,HYAL1,HYAL3,HYAL1,HYAL1,HYAL1,NAT6,NAT6,HYAL1,HYAL1,HYAL3,C3orf45,HYAL3,IFRD2,HYAL3	-3052,-3611,9878,-3005,1070,1070,1070,-3052,-3584,1070,1070,-3005,-23437,-3005,-9878,-3005
chr11:133711448-133711649	chr11	+	133711474	133711674	True	NM_174927,NR_027276	chr11,chr11	-,+	SPATA19,LOC100128239	3768,190492
chr4:146018088-146018960	chr4	+	146018632	146018998	True	NM_001040876,NM_002940,NM_014885	chr4,chr4,chr4	+,+,-	ABCE1,ABCE1,ANAPC10	157,157,420
chr9:137219677-137220162	chr9	+	137219694	137220202	True	NM_002957,NR_023344	chr9,chr9	+,-	RXRA,RNU6ATAC	-1429,-190008
chr14:64853941-64854301	chr14	+	64853945	64854227	True	NM_005956,NR_033777	chr14,chr14	+,-	MTHFD1,TEX21P	531,-39616
chr22:41468491-41469835	chr22	+	41468819	41469522	True	NM_138481,NR_031694	chr22,chr22	-,+	CHADL,MIR1281	167464,18994
chr17:56427916-56429590	chr17	+	56428217	56429604	True	NR_027647,NM_003168	chr17,chr17	+,-	LPO,SUPT4H1	-112481,9
chr11:61006926-61007435	chr11	+	61007174	61007484	True	NM_014224,NM_152718	chr11,chr11	+,-	PGA5,VWCE	1159,55354
chr11:61006926-61007435	chr11	+	60969861	60969913	False	NM_001079807,NM_017966	chr11,chr11	+,-	PGA3,VPS37C	1070,-40945
chr11:61006926-61007435	chr11	+	60988606	60988658	False	NM_017966,NM_001079808	chr11,chr11	-,+	VPS37C,PGA4	-59690,1162
chr17:19139934-19140249	chr17	+	19140010	19140246	True	NM_014964,NM_148921,NM_001102664,NR_031591	chr17,chr17,chr17,chr17	+,+,+,-	EPN2,EPN2,EPN2,MIR1180	443,443,443,107691
chr17:19139934-19140249	chr17	+	19013847	19014083	False	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	16698,-63511
chr19:57942742-57943425	chr19	+	57942742	57943190	True	NM_020633,NM_001023561	chr19,chr19	-,+	VN1R1,ZNF749	24975,3502
chr3:178986118-178988052	chr3	+	178986327	178987991	True	NM_016331,NR_028135,NM_171829,NM_171828,NM_001163677	chr3,chr3,chr3,chr3,chr3	+,-,-,-,-	ZNF639,KCNMB3,KCNMB3,KCNMB3,KCNMB3	53559,-8648,-8648,-1489,-1489
chr4:24918775-24919012	chr4	+	24918845	24918991	True	NM_001130726,NM_003102	chr4,chr4	-,+	CCDC149,SOD3	-4245,-121811
chr22:17954689-17956388	chr22	+	17954695	17956098	True	NM_001039366,NM_031413	chr22,chr22	-,+	ATP6V1E1,CECR2	155541,529
chr3:120493631-120495323	chr3	+	120493698	120495309	True	NM_173825,NM_005513	chr3,chr3	-,+	RABL3,GTF2E1	-32314,-32193
chr15:72767750-72768796	chr15	+	72767771	72768250	True	NM_000520,NM_005744	chr15,chr15	-,+	HEXA,ARIH1	-99251,-1155
chr18:43544653-43545766	chr18	+	43544985	43545707	True	NM_020964,NM_138443	chr18,chr18	-,+	EPG5,HAUS1	1648,138590
chr16:83841194-83841528	chr16	+	83841256	83841560	True	NM_001080442,NM_001537	chr16,chr16	-,+	SLC38A8,HSBP1	234252,32
chr9:33168166-33169609	chr9	+	33168211	33169487	True	NM_001497,NM_014471	chr9,chr9	-,+	B4GALT1,SPINK4	-855,70708
chrX:84633981-84634622	chrX	+	84634031	84634521	True	NM_021998,NM_024921	chrX,chrX	+,-	ZNF711,POF1B	-135097,277
chr7:101453880-101454306	chr7	+	101454060	101454181	True	NM_181552,NM_138403,NM_001913,NM_001202543,NM_001202546,NM_001202544,NM_001202545,NM_181500	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,-,+,+,+,+,+,+	CUX1,MYL10,CUX1,CUX1,CUX1,CUX1,CUX1,CUX1	6700,-181484,5002,5002,5106,5002,5002,5002
chr13:32623662-32625536	chr13	+	32623867	32625554	True	NM_001136571,NM_023037	chr13,chr13	-,+	ZAR1L,FRY	260587,-18481
chr17:29296571-29296873	chr17	+	29296575	29296737	True	NM_001184992,NM_197939,NM_024683,NM_032322,NR_002221	chr17,chr17,chr17,chr17,chr17	+,+,-,+,+	RNF135,RNF135,C17orf42,RNF135,DPRXP4	1218,1218,-63289,1218,5615
chr11:32856517-32857621	chr11	+	32856809	32857245	True	NM_001008391,NM_024081	chr11,chr11	-,+	CCDC73,PRRG4	-40622,-5385
chr14:92789191-92789549	chr14	+	92789239	92789541	True	NM_153648,NM_004545,NM_153646,NM_153647	chr14,chr14,chr14,chr14	+,-,+,+	SLC24A4,NDUFB1,SLC24A4,SLC24A4	-365,-201086,610,-5
chr4:79755506-79756406	chr4	+	79755754	79756212	True	NM_198892,NM_001040202	chr4,chr4	+,-	BMP2K,PAQR3	-58274,104428
chr5:24272805-24273379	chr5	+	24272815	24273123	True	NM_020227,NM_006727	chr5,chr5	+,-	PRDM9,CDH10	-765143,372012
chr14:38723536-38723903	chr14	+	38723543	38723891	True	NM_001049,NM_175060	chr14,chr14	+,-	SSTR1,CLEC14A	-46390,1733
chr19:56989723-56990386	chr19	+	56989727	56990197	True	NR_036521,NR_036522,NM_022103,NR_030740	chr19,chr19,chr19,chr19	+,+,-,-	LOC100128252,LOC100128252,ZNF667,ZNF667	-535,-285,-957,-957
chr15:75941002-75941224	chr15	+	75941006	75941268	True	NM_153271,NM_018285	chr15,chr15	+,-	SNX33,IMP3	79,-8342
chr4:988518-988923	chr4	+	988641	988837	True	NM_022042,NM_000203,NM_134425,NM_213613	chr4,chr4,chr4,chr4	-,+,-,-	SLC26A1,IDUA,SLC26A1,SLC26A1	-1458,-7907,-1458,-1417
chr13:20194920-20196141	chr13	+	20195349	20195989	True	NM_199254,NM_017520	chr13,chr13	-,+	TPTE2,MPHOSPH8	-84446,11798
chr20:42145455-42147368	chr20	+	42146232	42147066	True	NM_032107,NM_001008901,NM_015478	chr20,chr20,chr20	+,-,+	L3MBTL1,GTSF1L,L3MBTL1	-9963,208626,-3207
chr5:114727399-114728097	chr5	+	114727491	114727997	True	NM_001284,NM_001040440	chr5,chr5	+,-	AP3S1,CCDC112	449621,-95033
chr11:26744551-26746380	chr11	+	26744550	26746202	True	NM_178498,NM_203371	chr11,chr11	-,+	SLC5A12,FIBIN	-976,269425
chr6:137144252-137144618	chr6	+	137144308	137144568	True	NM_000288,NM_005923	chr6,chr6	+,-	PEX7,MAP3K5	-657,-30652
chr8:108447740-108447990	chr8	+	108447743	108447956	True	NM_001198535,NM_001146	chr8,chr8	+,-	OXR1,ANGPT1	-709459,62361
chr8:125378385-125379246	chr8	+	125378531	125379192	True	NM_017956,NM_194291	chr8,chr8	+,-	TRMT12,TMEM65	83855,5798
chr12:59309041-59310930	chr12	+	59309050	59310970	True	NM_004731,NM_153377,NM_001136051	chr12,chr12,chr12	+,-,-	SLC16A7,LRIG3,LRIG3	772155,3344,2409
chr1:14921889-14922528	chr1	+	14922240	14922574	True	NM_201628,NM_015209,NR_027136	chr1,chr1,chr1	+,+,-	KAZN,KAZN,C1orf126	2638,2638,556444
chr8:93094272-93096097	chr8	+	93094482	93095430	True	NM_001198629,NM_052832	chr8,chr8	-,+	RUNX1T1,SLC26A7	12110,-833027
chr11:67777471-67777768	chr11	+	67777596	67777752	True	NM_001161473,NM_030930,NM_000694,NM_001030010	chr11,chr11,chr11,chr11	+,-,+,+	ALDH3B1,UNC93B1,ALDH3B1,ALDH3B1	-1599,-6003,37,37
chr6:11537227-11537592	chr6	+	11537239	11537506	True	NM_001142393,NM_001100829	chr6,chr6	-,+	NEDD9,TMEM170B	-154658,1004
chr9:130690540-130690747	chr9	+	130690585	130690757	True	NM_001135219,NM_001018078,NM_173492	chr9,chr9,chr9	-,+,-	PIP5KL1,FPGS,PIP5KL1	2369,-125128,-815
chr19:2981021-2981647	chr19	+	2981366	2981596	True	NM_021217,NM_001143986,NM_024760	chr19,chr19,chr19	-,+,+	ZNF77,TLE6,TLE6	-36397,-3891,-3891
chr5:173037608-173038644	chr5	+	173037641	173038661	True	NR_027109,NM_001159651,NM_138369	chr5,chr5,chr5	+,-,-	LOC285593,BOD1,BOD1	-31035,5055,5055
chr15:91795470-91796310	chr15	+	91795518	91796325	True	NM_014848,NM_018668	chr15,chr15	+,-	SV2B,VPS33B	-152039,-229685
chr20:42197964-42198440	chr20	+	42198096	42198482	True	NM_016276,NM_001199264,NM_001008901	chr20,chr20,chr20	+,+,-	SGK2,SGK2,GTSF1L	-3410,-4392,157210
chr8:82755961-82757681	chr8	+	82755965	82757718	True	NM_022133,NM_152284,NM_152836,NM_152837	chr8,chr8,chr8,chr8	-,+,-,-	SNX16,CHMP4C,SNX16,SNX16	-1444,-111334,-1444,-1444
chr19:4125248-4125806	chr19	+	4125453	4125672	True	NM_030662,NM_032607	chr19,chr19	-,+	MAP2K2,CREB3L3	-1327,27956
chr3:36934935-36935234	chr3	+	36934955	36935257	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	51341,99583
chr6:15051951-15052229	chr6	+	15052022	15052260	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	194266,611079
chr2:179338914-179340250	chr2	+	179338968	179340294	True	NM_019091,NM_001135212,NM_181342	chr2,chr2,chr2	+,-,-	PLEKHA3,FKBP7,FKBP7	4904,3112,3112
chr6:26223321-26224611	chr6	+	26223777	26224658	True	NM_003518,NM_003532,NM_021052	chr6,chr6,chr6	-,+,+	HIST1H2BG,HIST1H3E,HIST1H2AE	-6905,724,-6681
chr11:60228011-60229204	chr11	+	60228011	60228957	True	NM_021950,NM_022349,NM_152866	chr11,chr11,chr11	+,-,+	MS4A1,MS4A6A,MS4A1	-4780,-277337,-4780
chr1:202679416-202679692	chr1	+	202679528	202679598	True	NR_002929,NM_177402	chr1,chr1	+,-	LOC148709,SYT2	151283,3
chr20:31347700-31347992	chr20	+	31347726	31347796	True	NM_006892,NM_175848,NM_175849,NM_053041	chr20,chr20,chr20,chr20	+,+,+,-	DNMT3B,DNMT3B,DNMT3B,COMMD7	2394,2394,2394,-15912
chr5:162891341-162892989	chr5	+	162891669	162892567	True	NM_012484,NM_012485,NM_145266,NM_001142556,NM_001142557	chr5,chr5,chr5,chr5,chr5	+,+,-,+,+	HMMR,HMMR,NUDCD2,HMMR,HMMR	-4216,-4216,-4526,-4216,-4216
chr17:1955600-1956816	chr17	+	1955621	1956795	True	NM_006497,NM_001098202,NR_029674,NR_029625	chr17,chr17,chr17,chr17	+,+,-,-	HIC1,HIC1,MIR132,MIR212	1597,2808,-2319,-1947
chr8:9761343-9761546	chr8	+	9761426	9761546	True	NR_024281,NM_001135670,NR_029668	chr8,chr8,chr8	-,+,-	LOC157627,MSRA,MIR124-1	-587,150283,-444
chr5:64776315-64776562	chr5	+	64776354	64776606	True	NM_015342,NM_197941	chr5,chr5	+,-	PPWD1,ADAMTS6	82524,1148
chr14:105070873-105071080	chr14	+	105070890	105071080	True	NM_207379,NM_001008404	chr14,chr14	-,+	TMEM179,C14orf180	67,-24885
chrX:43512137-43513182	chrX	+	43512177	43512989	True	NM_000898,NM_000240	chrX,chrX	-,+	MAOB,MAOA	228782,2419
chr22:25372806-25373080	chr22	+	25372818	25373128	True	NM_001145206,NM_001001663	chr22,chr22	+,-	KIAA1671,TMEM211	50812,-37504
chr11:8680727-8682595	chr11	+	8680867	8682597	True	NM_000990,NM_014818	chr11,chr11	+,-	RPL27A,TRIM66	21397,-484
chr19:37713658-37714655	chr19	+	37713734	37714228	True	NM_152279,NM_152604	chr19,chr19	-,+	ZNF585B,ZNF383	-12283,3137
chr11:105892228-105892528	chr11	+	105892385	105892459	True	NM_032424,NM_015423	chr11,chr11	-,+	KIAA1826,AASDHPPT	551,55832
chr15:45424734-45425627	chr15	+	45424752	45425646	True	NM_144565,NM_175940,NM_017434	chr15,chr15,chr15	-,+,+	DUOXA1,DUOX1,DUOX1	-2695,-2612,-2612
chr8:17404010-17405567	chr8	+	17404014	17405256	True	NM_001164771,NM_003046,NM_004686	chr8,chr8,chr8	+,+,-	SLC7A2,SLC7A2,MTMR7	-7779,-7779,-132974
chr12:120701172-120702062	chr12	+	120701179	120702089	True	NM_001080855,NM_002859,NM_012240	chr12,chr12,chr12	-,-,+	PXN,PXN,SIRT4	1524,1524,38034
chr7:1016539-1016801	chr7	+	1016687	1016831	True	NM_001031617,NM_017781	chr7,chr7	-,+	COX19,CYP2W1	-1452,6003
chr17:26696842-26698596	chr17	+	26696995	26698327	True	NM_001080837,NM_000638,NM_015077	chr17,chr17,chr17	-,-,+	SEBOX,VTN,SARM1	-4730,-82,659
chr9:66836562-66836995	chr9	+	66836747	66837039	True	NR_024443,NR_024496	chr9,chr9	-,+	LOC100133920,LOC442421	193993,-342529
chr7:127014056-127014842	chr7	+	127014411	127014878	True	NM_001662,NM_176814	chr7,chr7	+,-	ARF5,ZNF800	213527,17940
chr1:150295340-150296525	chr1	+	150296089	150296582	True	NM_004698,NM_016022	chr1,chr1	+,-	PRPF3,APH1A	-2219,-54557
chr16:31085633-31085868	chr16	+	31085635	31085791	True	NM_001172669,NM_001172670,NM_024706,NM_001172668,NM_014699	chr16,chr16,chr16,chr16,chr16	-,-,-,-,+	ZNF668,ZNF668,ZNF668,ZNF668,ZNF646	-9226,-9226,6,-812,-14
chr3:149377210-149379032	chr3	+	149377655	149378945	True	NM_007282,NM_001168280,NM_015472	chr3,chr3,chr3	+,-,-	RNF13,WWTR1,WWTR1	151529,-1843,-1767
chr9:95571607-95572035	chr9	+	95571613	95571791	True	NM_015250,NR_026868	chr9,chr9	-,+	BICD2,ANKRD19	-44530,101
chr5:43484494-43485450	chr5	+	43484556	43485257	True	NM_022483,NM_012343	chr5,chr5	-,+	C5orf28,NNT	-564,117533
chr1:51578784-51579075	chr1	+	51578784	51578995	True	NM_001136508,NM_007051	chr1,chr1	+,-	C1orf185,FAF1	-10933,-152848
chr10:70846474-70847428	chr10	+	70846622	70847427	True	NM_001057,NR_036430,NM_002727	chr10,chr10,chr10	-,+,+	TACR2,SRGN,SRGN	329297,400,400
chr10:94451401-94451602	chr10	+	94451412	94451535	True	NM_002729,NM_004969	chr10,chr10	+,-	HHEX,IDE	-1782,-117560
chrX:23680544-23681683	chrX	+	23680802	23681422	True	NM_006406,NM_001033583	chrX,chrX	+,-	PRDX4,ACOT9	4222,80041
chr2:85828120-85828984	chr2	+	85828512	85828980	True	NR_033179,NM_016494,NM_001031738	chr2,chr2,chr2	-,+,-	TMEM150A,RNF181,TMEM150A	892,-5726,892
chr1:147380777-147381020	chr1	+	147380819	147381003	True	NR_003377,NM_005267	chr1,chr1	-,+	PDZK1P1,GJA8	103378,-5924
chr4:156288224-156290158	chr4	+	156288793	156290129	True	NM_000910,NM_001039580	chr4,chr4	+,-	NPY2R,MAP9	-159070,8043
chr1:153626515-153627691	chr1	+	153626588	153627308	True	NM_012437,NM_004515	chr1,chr1	+,-	SNAPIN,ILF2	3836,16231
chr17:40689715-40690575	chr17	+	40689943	40690575	True	NM_000263,NM_013290	chr17,chr17	+,-	NAGLU,PSMC3IP	-2043,39222
chr18:21455994-21456300	chr18	+	21456058	21456344	True	NM_000227,NM_173505,NM_001127718	chr18,chr18,chr18	+,-,+	LAMA3,ANKRD29,LAMA3	-3125,-213209,-3125
chr2:44396613-44396962	chr2	+	44396702	44396938	True	NM_001033557,NM_001033556,NM_177969,NM_177968,NM_002706,NM_133259	chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,+,-	PPM1B,PPM1B,PPM1B,PPM1B,PPM1B,LRPPRC	-753,-753,-753,-753,-753,-173558
chr9:71395631-71395831	chr9	+	71395701	71395879	True	NM_002732,NM_138333	chr9,chr9	-,+	PRKACG,FAM122A	233210,-796
chr2:241567992-241568255	chr2	+	241568126	241568304	True	NM_005301,NM_001102467	chr2,chr2	+,-	GPR35,AQP12B	-3515,54063
chr16:23610470-23611648	chr16	+	23610469	23610810	True	NM_001199011,NM_019116,NM_005003	chr16,chr16,chr16	+,+,-	DCTN5,UBFD1,NDUFAB1	41876,-41662,-2830
chr2:196861308-196862031	chr2	+	196861520	196861930	True	NM_020342,NM_018897	chr2,chr2	+,-	SLC39A10,DNAH7	-339733,71660
chr1:115058631-115059711	chr1	+	115058960	115059711	True	NM_003176,NM_015906,NM_033020	chr1,chr1,chr1	+,-,-	SYCP1,TRIM33,TRIM33	337743,-5179,-5179
chr21:39867792-39869605	chr21	+	39867839	39869643	True	NM_182918,NM_170737,NM_001136155	chr21,chr21,chr21	-,+,-	ERG,KCNJ15,ERG	835,-223462,835
chr3:46608023-46608564	chr3	+	46608098	46608382	True	NM_001174136,NM_024512	chr3,chr3	+,-	TDGF1,LRRC2	7662,-87
chr17:1733560-1734150	chr17	+	1733587	1734067	True	NM_052928,NM_002945	chr17,chr17	-,+	SMYD4,RPA1	-412,-372
chr13:99226356-99228318	chr13	+	99226833	99228286	True	NM_001032296,NR_036129	chr13,chr13	-,+	STK24,MIR3170	1161,-366108
chr1:17306800-17307017	chr1	+	17306854	17307000	True	NM_014675,NM_001135248,NM_002403,NM_017459,NM_001135247	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	CROCC,MFAP2,MFAP2,MFAP2,MFAP2	-58460,223,223,1131,1131
chr2:71697658-71698819	chr2	+	71698310	71698733	True	NM_001130982,NM_001130983,NM_001130986,NM_001130455,NM_001130984,NM_001130985,NM_020459,NM_001130987	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,+,+,-,+	DYSF,DYSF,DYSF,DYSF,DYSF,DYSF,PAIP2B,DYSF	-4534,-4534,-4534,-4534,-4534,-4534,-244077,-4534
chr10:23216686-23217028	chr10	+	23216685	23217045	True	NM_005028,NM_173081	chr10,chr10	-,+	PIP4K2A,ARMC3	-213182,84
chr19:55380888-55381767	chr19	+	55381186	55381778	True	NM_002000,NM_001127255,NM_133279,NM_133278,NM_133269,NM_133274,NM_133277,NM_133271,NM_133273,NM_133272	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+,+,+,+,+	FCAR,NLRP7,FCAR,FCAR,FCAR,FCAR,FCAR,FCAR,FCAR,FCAR	3770,77145,3770,3770,3770,3770,3770,3770,3770,3770
chr16:87901577-87902371	chr16	+	87901945	87902405	True	NM_001173539,NM_003486	chr16,chr16	+,-	BANP,SLC7A5	82632,745
chr19:18303665-18303896	chr19	+	18303752	18303908	True	NM_002866,NM_032683	chr19,chr19	-,+	RAB3A,MPV17L2	11016,131
chr11:64060229-64060441	chr11	+	64060268	64060426	True	NM_001039496,NM_020155,NM_001177358,NM_001170880,NM_004322,NM_001170881,NM_001170726,NM_033310,NM_032989	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,-,+,+,+,-	C11orf20,GPR137,GPR137,GPR137,BAD,GPR137,GPR137,KCNK4,BAD	7436,-6737,-8036,-6737,-8092,-8034,-8508,-1526,-8092
chr15:81291864-81292803	chr15	+	81291890	81292765	True	NM_022566,NM_015154	chr15,chr15	+,-	MESDC1,MESDC2	529,-9685
chr11:47872778-47874361	chr11	+	47873207	47874317	True	NM_015231,NM_001098503	chr11,chr11	-,+	NUP160,PTPRJ	-3150,127792
chr12:116972642-116972925	chr12	+	116972796	116972962	True	NR_027346,NR_027345,NM_024738	chr12,chr12,chr12	+,+,-	NCRNA00173,NCRNA00173,C12orf49	-1607,-1620,202931
chr2:132514263-132514965	chr2	+	132514471	132514797	True	NM_214461,NM_013310	chr2,chr2	-,+	C2orf27B,C2orf27A	44487,-34458
chr6:2835790-2836124	chr6	+	2835930	2836140	True	NM_130395,NM_030666	chr6,chr6	+,-	WRNIP1,SERPINB1	-70322,5991
chrX:18883126-18883572	chrX	+	18883326	18883526	True	NM_000292,NR_029379	chrX,chrX	-,+	PHKA2,LOC100132163	119004,24887
chr5:62071930-62072561	chr5	+	62072291	62072592	True	NM_181506,NM_014473	chr5,chr5	+,-	LRRC70,DIMT1L	-197780,-372563
chr12:93100520-93100784	chr12	+	93100539	93100761	True	NM_001178097,NM_001037671,NM_003566	chr12,chr12,chr12	+,+,-	C12orf74,C12orf74,EEA1	-3971,-3971,222396
chr11:17493247-17494373	chr11	+	17493332	17494366	True	NM_000352,NM_001202439	chr11,chr11	-,+	ABCC8,DKFZp686O24166	4133,-120080
chr16:67526294-67526954	chr16	+	67526300	67527015	True	NM_001138,NM_024519	chr16,chr16	-,+	AGRP,FAM65A	-8584,35701
chr13:32627172-32628866	chr13	+	32627443	32628663	True	NM_001136571,NM_023037	chr13,chr13	-,+	ZAR1L,FRY	257490,-22058
chr13:52980556-52981344	chr13	+	52980569	52981304	True	NM_001098525,NM_199263,NM_018676	chr13,chr13,chr13	+,-,-	CKAP2,THSD1,THSD1	48190,-4,-4
chr10:104596136-104597130	chr10	+	104596331	104597119	True	NM_000102,NM_001136200	chr10,chr10	-,+	CYP17A1,C10orf32	221,16847
chr21:45721406-45721935	chr21	+	45721487	45721911	True	NR_024108,NM_002626,NM_004928	chr21,chr21,chr21	+,+,-	PFKL,PFKL,C21orf2	-1613,-1608,37424
chr2:62115334-62115592	chr2	+	62115357	62115577	True	NM_006430,NM_152516	chr2,chr2	-,+	CCT4,COMMD1	264,17225
chr11:34645869-34646221	chr11	+	34645926	34646254	True	NM_001422,NM_012153	chr11,chr11	-,+	ELF5,EHF	-110596,-3398
chr12:57873174-57874055	chr12	+	57873182	57873970	True	NM_032496,NM_004990,NM_001080157,NM_001080156	chr12,chr12,chr12,chr12	-,+,-,-	ARHGAP9,MARS,ARHGAP9,ARHGAP9	-47,7765,30,-1454
chr17:40705271-40705612	chr17	+	40705280	40705624	True	NM_000413,NM_025233,NM_001042531,NM_001042530,NM_001042532,NM_013290,NM_001042529	chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,-,+	HSD17B1,COASY,COASY,COASY,COASY,PSMC3IP,COASY	-1347,8467,8467,8467,8467,24173,8467
chr6:123317739-123318021	chr6	+	123317762	123317874	True	NM_001010852,NM_020755	chr6,chr6	+,-	CLVS2,SERINC1	-231,-524810
chr15:67837249-67837463	chr15	+	67837289	67837507	True	NM_002757,NM_145160,NM_024666	chr15,chr15,chr15	+,+,-	MAP2K5,MAP2K5,AAGAB	-2319,-2319,-290215
chr2:37516553-37517534	chr2	+	37516554	37517354	True	NM_012413,NM_005813	chr2,chr2	+,-	QPCT,PRKD3	54398,26931
chr11:61658250-61658509	chr11	+	61658351	61658469	True	NM_001139443,NM_021727	chr11,chr11	+,-	BEST1,FADS3	58886,587
chrX:51242510-51243191	chrX	+	51242684	51243166	True	NM_018159,NM_153183	chrX,chrX	-,+	NUDT11,NUDT10	-3225,-167662
chr12:56048425-56048745	chr12	+	56048470	56048778	True	NM_001144996,NM_206899	chr12,chr12	-,+	ITGA7,OR10P1	52958,-17845
chr11:58874483-58874761	chr11	+	58874486	58874786	True	NM_001142704,NR_033853,NM_001142703,NM_198947	chr11,chr11,chr11,chr11	+,-,+,+	FAM111B,LOC283194,FAM111B,FAM111B	-41,-48561,-41,-41
chr6:90598373-90599635	chr6	+	90598619	90599570	True	NM_014611,NM_032602	chr6,chr6	-,+	MDN1,GJA10	-69177,4617
chr14:65453956-65455243	chr14	+	65454058	65455161	True	NM_002028,NM_198686	chr14,chr14	+,-	FNTB,RAB15	-602,-15183
chr7:56033763-56034196	chr7	+	56033807	56033948	True	NM_001202469,NM_001483,NM_004577	chr7,chr7,chr7	+,+,-	GBAS,GBAS,PSPH	-1589,-1589,85371
chr1:74720960-74721945	chr1	+	74721126	74721765	True	NM_015978,NM_001105659	chr1,chr1	+,-	TNNI3K,LRRIQ3	-20116,-57255
chr22:39100985-39101930	chr22	+	39101093	39101977	True	NM_014876,NM_004286	chr22,chr22	-,+	JOSD1,GTPBP1	-4634,-53
chr17:66890670-66892025	chr17	+	66891016	66892046	True	NM_007168,NM_212472	chr17,chr17	-,+	ABCA8,PRKAR1A	59537,-382531
chr15:23379394-23379825	chr15	+	23379580	23379803	True	NR_002824,NR_036470	chr15,chr15	-,+	HERC2P2,HERC2P7	-1321,10918
chr15:23379394-23379825	chr15	+	20712788	20713011	False	NR_036432,NR_027411	chr15,chr15	-,+	HERC2P3,GOLGA8C	-1355,54662
chr15:23379394-23379825	chr15	-	28833031	28833254	False	NR_036443,NR_033351	chr15,chr15	+,-	HERC2P9,GOLGA8F	66333,-54888
chr15:23379394-23379825	chr15	+	28568660	28568883	False	NM_004667,NR_033351	chr15,chr15	-,+	HERC2,GOLGA8F	-1365,54900
chr3:186333908-186334179	chr3	+	186334050	186334157	True	NM_001622,NM_001134415	chr3,chr3	+,-	AHSG,TBCCD1	-3259,-45718
chr15:76031286-76031592	chr15	+	76031328	76031586	True	NM_175881,NR_024595	chr15,chr15	+,-	ODF3L1,DNM1P35	-15060,966
chr2:9983092-9983355	chr2	+	9983151	9983403	True	NM_006826,NM_005680	chr2,chr2	-,+	YWHAQ,TAF1B	-212045,167
chr19:16280769-16281351	chr19	+	16280916	16281291	True	NM_014077,NM_054113	chr19,chr19	+,-	FAM32A,CIB3	14943,3052
chr8:103425858-103426307	chr8	+	103425992	103426076	True	NM_024410,NM_015902	chr8,chr8	+,-	ODF1,UBR5	137771,-1075
chr22:39416885-39417404	chr22	+	39416918	39417453	True	NM_152426,NM_175709,NM_014508	chr22,chr22,chr22	+,-,+	APOBEC3D,CBX7,APOBEC3C	43,131135,-6704
chr22:39416885-39417404	chr22	+	39436677	39436833	False	NM_145298,NM_001006666,NM_175709	chr22,chr22,chr22	+,+,-	APOBEC3F,APOBEC3F,CBX7	-55,-55,111755
chr22:39416885-39417404	chr22	+	39473078	39473234	False	NM_021822,NM_175709	chr22,chr22	+,-	APOBEC3G,CBX7	-119,75354
chr2:98612941-98613162	chr2	+	98612991	98613189	True	NM_015348,NM_144992	chr2,chr2	-,+	TMEM131,VWA3B	-637,90405
chr20:24914112-24914853	chr20	+	24914232	24914898	True	NM_003650,NM_020531	chr20,chr20	+,-	CST7,C20orf3	14967,58577
chr11:56513691-56514006	chr11	+	56513877	56514025	True	NM_001005284,NM_001013358	chr11,chr11	-,+	OR9G4,OR9G9	-2590,-46080
chr19:49566146-49567417	chr19	+	49566179	49567451	True	NM_031886,NM_006179,NM_033043,NM_033142	chr19,chr19,chr19,chr19	-,-,+,-	KCNA7,NTF4,CGB5,CGB7	8797,163,-19128,-7182
chr9:134163735-134164209	chr9	+	134163743	134164181	True	NM_032728,NM_033387	chr9,chr9	+,-	PPAPDC3,FAM78A	899,-11837
chr4:186985877-186987526	chr4	+	186986125	186987409	True	NM_021069,NM_003265	chr4,chr4	-,+	SORBS2,TLR3	-108255,2899
chr3:20223883-20224230	chr3	+	20223888	20224217	True	NM_001012409,NM_003884,NM_001012413,NM_001012412,NM_001012411,NM_001012410,NM_001199257,NM_001199256,NM_001199255,NM_001199254,NM_001199253,NM_138484,NM_001199251,NM_001199252	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-,-,-,-,-,-,-,-,-	SGOL1,KAT2B,SGOL1,SGOL1,SGOL1,SGOL1,SGOL1,SGOL1,SGOL1,SGOL1,SGOL1,SGOL1,SGOL1,SGOL1	3542,-142415,3542,3542,3542,3542,3568,3568,3568,3568,3568,3542,3568,3568
chr4:25656693-25657360	chr4	+	25656769	25657351	True	NM_015187,NM_001177998,NM_001177999,NM_006424	chr4,chr4,chr4,chr4	-,+,+,+	SEL1L3,SLC34A2,SLC34A2,SLC34A2	207309,83,734,83
chr3:179040719-179040943	chr3	+	179040718	179040988	True	NM_016331,NM_171828	chr3,chr3	+,-	ZNF639,KCNMB3	562,-55880
chr1:54387989-54389450	chr1	+	54388115	54389489	True	NM_052940,NM_016126	chr1,chr1	+,-	LRRC42,HSPB11	22547,21855
chr19:50939152-50939520	chr19	+	50939262	50939510	True	NM_004533,NM_138411	chr19,chr19	+,-	MYBPC2,FAM71E1	-3153,40543
chr9:114657228-114657769	chr9	+	114657408	114657559	True	NM_003358,NM_173521	chr9,chr9	+,-	UGCG,C9orf84	1646,-111629
chr9:99319264-99319483	chr9	+	99319268	99319347	True	NM_001077181,NM_014282	chr9,chr9	-,+	CDC14B,HABP4	9907,-106905
chr9:136224066-136224385	chr9	+	136224089	136224401	True	NM_133640,NM_000972,NM_181491,NR_000017,NR_002447,NM_003172,NM_017503,NR_002448,NR_000016	chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,+,-,+,+,-,+,+,+	MED22,RPL7A,MED22,SNORD36B,SNORD24,SURF1,SURF2,SNORD36A,SNORD36C	-9117,-9071,-9117,-7191,-7889,-728,-719,-6829,-6439
chr17:46035295-46035674	chr17	+	46035296	46035710	True	NM_176096,NM_024320	chr17,chr17	+,-	CDK5RAP3,PRR15L	12718,-186
chr19:50641392-50642469	chr19	+	50642405	50642481	True	NM_001145809,NR_024243,NR_024231,NR_024230	chr19,chr19,chr19,chr19	+,-,-,-	MYH14,SNAR-D,SNAR-B1,SNAR-B2	64403,1146,63,63
chr19:50641392-50642469	chr19	+	50637032	50637108	False	NR_024223,NR_024224,NR_024225,NR_024226,NR_024227,NR_024228,NR_024229,NM_001145809,NR_024215,NR_024214,NR_024231,NR_024230,NR_024242,NR_024243	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,+,-,-,-,-,-,-	SNAR-A5,SNAR-A7,SNAR-A11,SNAR-A9,SNAR-A6,SNAR-A8,SNAR-A10,MYH14,SNAR-A4,SNAR-A3,SNAR-B1,SNAR-B2,SNAR-A14,SNAR-D	-5253,-5253,-5253,-5253,-5253,-5253,-5253,69776,-5253,-5253,63,63,-5253,6519
chr19:58361538-58361889	chr19	+	58361544	58361718	True	NM_032828,NR_024162,NM_001204817	chr19,chr19,chr19	+,-,+	ZNF587,FKBP1AP1,ZNF587	-414,-22714,-414
chr4:618189-618544	chr4	+	618338	618517	True	NM_000283,NM_007100,NM_001145291	chr4,chr4,chr4	+,-,+	PDE6B,ATP5I,PDE6B	845,49661,845
chr1:1368794-1368997	chr1	+	1368932	1369046	True	NM_199121,NR_026871,NM_001146685,NM_022834	chr1,chr1,chr1,chr1	+,-,+,+	VWA1,LOC441869,TMEM88B,VWA1	1856,-12282,-7475,1856
chr1:155006972-155008260	chr1	+	155007086	155008058	True	NM_152494,NM_144622,NM_001143687	chr1,chr1,chr1	+,-,+	DCST1,DCST2,DCST1	-855,-829,-855
chr1:10511594-10513551	chr1	+	10511641	10512969	True	NM_004401,NM_001302	chr1,chr1	-,+	DFFA,CORT	19694,-1916
chr1:167052275-167053973	chr1	+	167052437	167054003	True	NM_005814,NM_001080426	chr1,chr1	-,+	GPA33,DUSP27	5915,10083
chr1:52832318-52832761	chr1	+	52832322	52832665	True	NM_032864,NM_032449	chr1,chr1	+,-	PRPF38A,CC2D1B	37553,-445
chr22:39896859-39897486	chr22	+	39897032	39897362	True	NM_019008,NM_194326	chr22,chr22	+,-	SMCR7L,RPS19BP1	921,31548
chr1:36848838-36849281	chr1	+	36848895	36849319	True	NM_024676,NM_032017	chr1,chr1	+,-	SH3D21,STK40	-76239,2216
chr4:183838846-183839084	chr4	+	183838912	183838978	True	NR_003612,NM_001921,NM_001012732	chr4,chr4,chr4	+,-,-	FAM92A3,DCTD,DCTD	119839,-282,-282
chr1:32476897-32477954	chr1	+	32477690	32477779	True	NM_080391,NM_006559	chr1,chr1	-,+	PTP4A2,KHDRBS1	-73702,1711
chr8:124254760-124255504	chr8	+	124254792	124255497	True	NM_032847,NM_207006	chr8,chr8	-,+	C8orf76,FAM83A	-1154,-60091
chr12:107171310-107171667	chr12	+	107171312	107171686	True	NM_001033050,NM_018157	chr12,chr12	-,+	MTERFD3,RIC8B	209293,-2969
chr11:118016467-118016757	chr11	+	118016536	118016640	True	NR_024527,NM_001142349,NM_001142348,NM_019894,NM_174934	chr11,chr11,chr11,chr11,chr11	-,-,-,+,-	SCN4B,SCN4B,SCN4B,TMPRSS4,SCN4B	-352,-352,7040,-68860,7040
chr17:57408544-57408786	chr17	+	57408557	57408765	True	NM_182620,NM_001005404	chr17,chr17	-,+	SKA2,YPEL2	-175757,287
chrX:103230237-103230645	chrX	+	103230250	103230622	True	NR_003238,NM_001002916	chrX,chrX	+,-	H2BFXP,H2BFWT	103,37684
chrX:103230237-103230645	chrX	-	103317381	103317753	False	NR_003238,NM_001164416	chrX,chrX	-,+	H2BFXP,H2BFM	-103,-22916
chr8:143916389-143916785	chr8	+	143916587	143916657	True	NM_002066,NM_000497	chr8,chr8	+,-	GML,CYP11B1	-421,44629
chr16:78055437-78055640	chr16	+	78055437	78055650	True	NM_005752,NM_199355	chr16,chr16	+,-	CLEC3A,ADAMTS18	792,-586426
chr12:111125479-111125821	chr12	+	111125479	111125869	True	NM_001040107,NM_032369,NM_001173975	chr12,chr12,chr12	-,-,+	HVCN1,HVCN1,TCTN1	1798,1127,-73618
chr5:52283119-52283718	chr5	+	52283256	52283750	True	NM_002203,NM_004531	chr5,chr5	+,-	ITGA2,MOCS2	1405,121625
chr7:99818806-99819907	chr7	+	99818930	99819676	True	NM_024070,NM_152742	chr7,chr7	+,-	PVRIG,GPC2	-2110,-43940
chr17:47022382-47023157	chr17	+	47022496	47022769	True	NM_023079,NM_007241	chr17,chr17	+,-	UBE2Z,SNF8	-36816,-342
chr7:128767469-128767742	chr7	+	128767534	128767722	True	NR_002144,NR_034053	chr7,chr7	+,-	LOC407835,TNPO3	-1260,-72307
chr8:92993478-92993751	chr8	+	92993482	92993595	True	NM_175636,NM_052832	chr8,chr8	-,+	RUNX1T1,SLC26A7	36366,-732032
chr1:117306843-117307816	chr1	+	117307150	117307754	True	NM_001767,NM_001542	chr1,chr1	+,-	CD2,IGSF3	-10115,-96836
chr13:79233127-79233333	chr13	+	79233191	79233325	True	NM_024546,NM_001161407	chr13,chr13	-,+	RNF219,NDFIP2	39,821933
chr10:98058651-98059461	chr10	+	98058679	98059429	True	NM_001017520,NM_013314,NM_004088	chr10,chr10,chr10	+,-,+	DNTT,BLNK,DNTT	4655,-27346,4655
chr19:21203694-21204024	chr19	+	21203893	21204031	True	NM_001172671,NM_025189,NM_021269	chr19,chr19,chr19	+,+,-	ZNF430,ZNF430,ZNF708	-518,-518,308231
chr17:3819578-3819878	chr17	+	3819681	3819917	True	NM_002558,NM_031965	chr17,chr17	-,+	P2RX1,GSG2	93,-192535
chr3:150473065-150474587	chr3	+	150474002	150474519	True	NM_005067,NM_016275	chr3,chr3	-,+	SIAH2,SELT	6805,-152988
chr17:7350541-7351116	chr17	+	7350594	7351068	True	NM_004112,NM_001128833,NM_000747	chr17,chr17,chr17	+,-,+	FGF11,ZBTB4,CHRNB1	-7956,31928,-2239
chr3:49377128-49377344	chr3	+	49377151	49377391	True	NM_003363,NM_199443,NR_036233	chr3,chr3,chr3	-,-,+	USP4,USP4,MIR4271	195,195,-65649
chr5:217100-217637	chr5	+	217335	217665	True	NM_004168,NM_145265	chr5,chr5	+,-	SDHA,CCDC127	690,682
chr5:217100-217637	chr5	-	1597727	1597784	False	NR_003263,NM_004553	chr5,chr5	-,+	SDHAP3,NDUFS6	-3081,203711
chr12:77154284-77155435	chr12	+	77154477	77155260	True	NM_001321,NM_015336	chr12,chr12	-,+	CSRP2,ZDHHC17	117598,2593
chr9:131311315-131311613	chr9	+	131311351	131311463	True	NM_001195532,NM_001130438,NM_052844,NM_003127	chr9,chr9,chr9,chr9	+,+,-,+	SPTAN1,SPTAN1,WDR34,SPTAN1	3373,3373,107716,3373
chr14:64737319-64738134	chr14	+	64737515	64737721	True	NM_182910,NM_001040275	chr14,chr14	+,-	SYNE2,ESR2	-54901,23465
chr14:73706742-73707196	chr14	+	73706757	73707059	True	NM_021260,NM_173462	chr14,chr14	-,+	ZFYVE1,PAPLN	-212837,-2603
chr8:37655636-37655863	chr8	+	37655750	37655834	True	NR_003671,NM_032777	chr8,chr8	-,+	LOC728024,GPR124	-50186,-1400
chr19:17516222-17516771	chr19	+	17516339	17516747	True	NM_004335,NM_138401	chr19,chr19	-,+	BST2,FAM125A	41,14164
chr3:69061828-69062214	chr3	+	69061843	69062111	True	NM_006407,NM_173654	chr3,chr3	+,-	ARL6IP5,C3orf64	71978,713
chr4:48269982-48271070	chr4	+	48270055	48271058	True	NM_020846,NM_003215	chr4,chr4	+,-	SLAIN2,TEC	72554,807
chr12:118573347-118573986	chr12	+	118573528	118573938	True	NM_002567,NM_019086	chr12,chr12	+,-	PEBP1,VSIG10	-69,-31718
chr17:3570357-3570891	chr17	+	3570668	3570916	True	NM_001204698,NM_001014764,NM_014604,NM_031298	chr17,chr17,chr17,chr17	-,+,-,+	TAX1BP3,TMEM93,TAX1BP3,TMEM93	1107,1173,1107,1173
chr8:140715742-140715979	chr8	+	140715750	140716001	True	NM_016601,NM_017444	chr8,chr8	-,+	KCNK9,CHRAC1	-451,805399
chr5:175977158-175977415	chr5	+	175977270	175977456	True	NM_014901,NM_017675,NM_001171976	chr5,chr5,chr5	-,+,+	RNF44,CDHR2,CDHR2	-12849,-978,-7809
chr11:116959841-116961816	chr11	+	116960466	116961795	True	NM_025164,NM_002572	chr11,chr11	-,+	SIK3,PAFAH1B2	7248,53204
chr1:17046418-17048121	chr1	+	17046437	17048144	True	NR_026567,NR_037446	chr1,chr1	-,+	ESPNP,MIR3675	51,-38738
chr20:56300969-56302070	chr20	+	56300992	56301830	True	NM_002591,NM_199171	chr20,chr20	+,-	PCK1,PMEPA1	-164906,-14451
chr3:138764069-138764873	chr3	+	138764072	138764286	True	NM_001134657,NR_026783	chr3,chr3	-,+	PRR23C,BPESC1	-338,58740
chr2:96969550-96970552	chr2	+	96969720	96970591	True	NM_014014,NM_001008949	chr2,chr2	-,+	SNRNP200,ITPRIPL1	766,20470
chr11:75111076-75112017	chr11	+	75111082	75111860	True	NM_001005,NM_001039548,NR_000005,NR_000025	chr11,chr11,chr11,chr11	+,-,+,+	RPS3,KLHL35,SNORD15A,SNORD15B	-571,29864,-34,3604
chr12:12878660-12878954	chr12	+	12878905	12878965	True	NM_001130415,NM_006143,NM_004064	chr12,chr12,chr12	+,-,+	APOLD1,GPR19,CDKN1B	-105,-29784,-8654
chr1:100735182-100736720	chr1	+	100735604	100736292	True	NM_001918,NM_003729,NM_001130841	chr1,chr1,chr1	-,+,+	DBT,RTCD1,RTCD1	-20195,-3953,-3953
chr13:20540739-20542473	chr13	+	20541061	20542271	True	NM_001039650,NM_197968,NM_003453,NM_001190964,NM_001190965	chr13,chr13,chr13,chr13,chr13	-,+,+,+,+	ZMYM5,ZMYM2,ZMYM2,ZMYM2,ZMYM2	-103285,-8302,-8302,-8264,-8138
chr15:74287558-74288186	chr15	+	74287598	74288030	True	NM_004809,NM_033238,NM_033239,NM_033250,NM_002675,NM_033247,NM_033246,NM_033244,NM_033240,NM_033249	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,+,+,+,+,+,+,+,+,+	STOML1,PML,PML,PML,PML,PML,PML,PML,PML,PML	-2963,-635,-635,-635,-635,-635,-635,-635,-635,-635
chr2:153202697-153204521	chr2	+	153202831	153204276	True	NM_052905,NM_005843	chr2,chr2	+,-	FMNL2,STAM2	-11138,-170325
chr17:4463031-4463696	chr17	+	4463119	4463541	True	NM_198501,NM_001105538,NM_014520,NM_153338,NM_001122890	chr17,chr17,chr17,chr17,chr17	+,-,-,-,-	SMTNL2,MYBBP1A,MYBBP1A,GGT6,GGT6	23734,-4438,-4438,385,385
chr5:177433175-177433385	chr5	+	177433199	177433361	True	NM_006261,NM_001079527	chr5,chr5	-,+	PROP1,FAM153C	-9956,2327
chr5:177433175-177433385	chr5	-	177210443	177210503	False	NR_003615,NM_173663	chr5,chr5	+,-	LOC728554,FAM153A	91758,-2938
chr5:177433175-177433385	chr5	+	175487485	175487647	False	NM_032361,NM_001079529	chr5,chr5	-,+	THOC3,FAM153B	-91940,24261
chr13:53030041-53031219	chr13	+	53030196	53031034	True	NM_001098525,NM_016075,NM_018204	chr13,chr13,chr13	+,-,+	CKAP2,VPS36,CKAP2	-753,-5433,-753
chr12:50897454-50897777	chr12	+	50897625	50897740	True	NM_173602,NM_001145475	chr12,chr12	+,-	DIP2B,FAM186A	1027,-107220
chr1:202112498-202112959	chr1	+	202112504	202112950	True	NM_004767,NM_138795	chr1,chr1	+,-	GPR37L1,ARL8A	-20528,966
chr17:62208003-62208944	chr17	+	62208156	62208920	True	NR_004380,NM_001433	chr17,chr17	+,-	SNORD104,ERN1	14517,-654
chr1:167600399-167601058	chr1	+	167600496	167601085	True	NM_052862,NM_003851	chr1,chr1	+,-	RCSD1,CREG1	-1080,-77440
chr7:139042911-139043521	chr7	+	139043037	139043443	True	NM_016019,NR_033999	chr7,chr7	+,-	LUC7L2,LOC100129148	1190,68883
chr6:143928208-143929404	chr6	+	143928341	143929335	True	NM_001100166,NR_027113,NM_014721	chr6,chr6,chr6	+,-,+	PHACTR2,LOC285740,PHACTR2	-19,-37865,-19
chr14:64004376-64004744	chr14	+	64004422	64004598	True	NM_006246,NM_015180	chr14,chr14	-,+	PPP2R5E,SYNE2	5541,315084
chr11:89576874-89578297	chr11	+	89577119	89577982	True	NM_001164397,NR_028346	chr11,chr11	-,+	TRIM64B,TRIM53	31254,-2012
chr11:89576874-89578297	chr11	-	89732858	89733721	False	NM_001136486,NR_028346,NM_001195234	chr11,chr11,chr11	+,-,+	TRIM64,TRIM53,TRIM49L2	-31238,2012,30552
chr19:54704331-54704553	chr19	+	54704506	54704594	True	NM_001013,NM_001146082,NM_001077446	chr19,chr19,chr19	+,-,+	RPS9,MBOAT7,TSEN34	131,-10773,-9453
chr9:124130181-124131801	chr9	+	124130211	124131840	True	NM_004099,NM_000177,NM_198194	chr9,chr9,chr9	-,+,-	STOM,GSN,STOM	755,-68195,755
chr6:143834028-143834754	chr6	+	143834247	143834664	True	NM_032020,NM_003630	chr6,chr6	-,+	FUCA2,PEX3	-1227,-62380
chr6:47455348-47456424	chr6	+	47455469	47456122	True	NM_014452,NM_012120	chr6,chr6	-,+	TNFRSF21,CD2AP	-177789,-10011
chr9:74761497-74762213	chr9	+	74761786	74762110	True	NM_004293,NM_001128618	chr9,chr9	+,-	GDA,C9orf57	2182,-86265
chr3:50230577-50230946	chr3	+	50230696	50230830	True	NM_000172,NM_006764,NM_144499	chr3,chr3,chr3	+,-,+	GNAT1,IFRD2,GNAT1	-1704,99246,-1704
chr19:51672208-51673862	chr19	+	51673115	51673660	True	NR_002804,NM_145232	chr19,chr19	+,-	SIGLECP3,CTU1	-2581,-61468
chr2:242643837-242644535	chr2	+	242644046	242644312	True	NR_033255,NM_032329	chr2,chr2	-,+	DTYMK,ING5	-17663,-2641
chr22:38435545-38435757	chr22	+	38435668	38435748	True	NM_013356,NM_001039583	chr22,chr22	-,+	SLC16A8,PICK1	43472,17513
chr6:27790502-27791593	chr6	+	27790644	27791365	True	NM_021968,NM_021066,NM_003521,NM_003541	chr6,chr6,chr6,chr6	+,-,+,-	HIST1H4J,HIST1H2AJ,HIST1H2BM,HIST1H4K	537,-8126,-7885,7997
chr12:94941844-94942096	chr12	+	94941843	94942129	True	NM_016122,NR_027035	chr12,chr12	-,+	CCDC41,LOC144486	-88079,-88115
chr8:145028503-145028950	chr8	+	145028528	145028892	True	NM_201379,NM_201381,NM_201380,NM_000837,NR_030383	chr8,chr8,chr8,chr8,chr8	-,-,-,+,-	PLEC,PLEC,PLEC,GRINA,MIR661	-440,-9623,-3484,35333,-9081
chr13:41704901-41706635	chr13	+	41705017	41706575	True	NM_007187,NM_152903	chr13,chr13	+,-	WBP4,KBTBD6	-69371,411
chr7:75988830-75989098	chr7	+	75988858	75989122	True	NM_012479,NM_007155	chr7,chr7	-,+	YWHAG,ZP3	-516,37718
chr19:10380816-10381097	chr19	+	10381004	10381082	True	NM_000201,NM_004230	chr19,chr19	+,-	ICAM1,S1PR2	434,-39056
chr19:44456772-44457209	chr19	+	44456778	44457050	True	NM_003425,NM_013359	chr19,chr19	-,+	ZNF45,ZNF221	-17367,-1432
chr9:71317716-71319278	chr9	+	71317738	71319301	True	NM_003558,NM_153237	chr9,chr9	+,-	PIP5K1B,C9orf71	1314,-161955
chr9:95087973-95088188	chr9	+	95087978	95088074	True	NR_024020,NM_001012267,NM_017948	chr9,chr9,chr9	-,+,-	NOL8,CENPP,NOL8	-102,-288,-102
chr3:133115625-133115892	chr3	+	133115628	133115891	True	NM_003571,NM_007027	chr3,chr3	+,-	BFSP2,TOPBP1	2898,264896
chr12:130644998-130645326	chr12	+	130645096	130645262	True	NR_033834,NM_007197	chr12,chr12	-,+	FLJ31485,FZD10	1011,1741
chr3:123579899-123580523	chr3	+	123580005	123580539	True	NR_028136,NM_053028	chr3,chr3	+,-	KALRN,MYLK	233018,22660
chr11:63437468-63438348	chr11	+	63437643	63438226	True	NM_006054,NM_015459	chr11,chr11	+,-	RTN3,ATL3	10695,912
chr6:142502361-142504145	chr6	+	142503110	142504138	True	NM_016485,NM_002511	chr6,chr6	+,-	VTA1,NMBR	-34763,-93174
chr10:123686271-123686730	chr10	+	123686293	123686779	True	NM_001001976,NM_206861,NM_007041	chr10,chr10,chr10	-,+,-	ATE1,TACC2,ATE1	817,61909,817
chr7:23569954-23570156	chr7	+	23569989	23570175	True	NM_013293,NR_026676	chr7,chr7	-,+	TRA2A,RPS2P32	1531,-40038
chr2:71164804-71165243	chr2	+	71164811	71165255	True	NM_144582,NM_001692	chr2,chr2	-,+	TEX261,ATP6V1B1	56796,-1864
chr21:43637263-43637471	chr21	+	43637269	43637445	True	NM_004915,NM_207174,NM_003226,NM_016818,NM_207629	chr21,chr21,chr21,chr21,chr21	+,+,-,+,+	ABCG1,ABCG1,TFF3,ABCG1,ABCG1	1821,2562,98311,1821,-1133
chr14:65007033-65007284	chr14	+	65007082	65007162	True	NM_006977,NM_021979,NM_172365	chr14,chr14,chr14	-,+,+	ZBTB25,HSPA2,C14orf50	-36528,23,9457
chr7:98734745-98735206	chr7	+	98734799	98735227	True	NM_020429,NM_001199847,NR_002147,NM_181349	chr7,chr7,chr7,chr7	-,-,+,-	SMURF1,SMURF1,MYH16,SMURF1	6566,6566,135696,6566
chr2:5834107-5834612	chr2	+	5834134	5834651	True	NR_034134,NM_003108	chr2,chr2	-,+	LOC727982,SOX11	-1130322,-1386
chr18:44524812-44526731	chr18	+	44524990	44526495	True	NM_001100817,NM_031303	chr18,chr18	-,+	TCEB3CL,KATNAL2	17926,291
chr10:97356813-97358144	chr10	+	97356871	97357589	True	NM_024991,NM_001098175	chr10,chr10	-,+	SORBS1,ENTPD1	-35700,113946
chr19:2454213-2454979	chr19	+	2454334	2455018	True	NM_032737,NM_015675	chr19,chr19	-,+	LMNB2,GADD45B	1990,21104
chr17:42020484-42021420	chr17	+	42020524	42021434	True	NR_026770,NM_002722	chr17,chr17	+,-	C17orf88,PPY	-26005,-691
chr13:52596221-52597588	chr13	+	52596576	52597507	True	NM_001005918,NM_021645	chr13,chr13	-,+	ATP7B,UTP14C	-10946,1319
chr2:171671835-171672309	chr2	+	171671839	171672309	True	NM_013445,NM_000817,NR_027433	chr2,chr2,chr2	+,+,-	GAD1,GAD1,LOC440925	890,890,-100762
chr17:78151961-78152182	chr17	+	78152036	78152209	True	NM_052819,NM_024110,NM_014740	chr17,chr17,chr17	+,+,-	CARD14,CARD14,EIF4A3	9389,71,-31054
chr2:190428381-190429420	chr2	+	190428436	190428912	True	NM_019048,NM_014585	chr2,chr2	+,-	ASNSD1,SLC40A1	97212,16675
chrX:48116580-48117894	chrX	+	48116614	48117778	True	NM_175723,NM_005635	chrX,chrX	-,+	SSX5,SSX1	-60415,-1868
chr12:183634-185116	chr12	+	183664	185070	True	NM_015232,NM_001170738,NR_026823	chr12,chr12,chr12	+,+,-	IQSEC3,IQSEC3,FAM138D	1471,-7666,-34252
chr12:183634-185116	chr20	-	62950658	62951635	False	NM_001104925,NM_005286	chr20,chr20	+,-	PCMTD2,NPBWR2	-63662,-212474
chr10:111969575-111969850	chr10	+	111969574	111969750	True	NM_001008541,NM_005871,NM_130439	chr10,chr10,chr10	+,-,+	MXI1,SMNDC1,MXI1	238,95007,-2262
chr15:45053956-45054322	chr15	+	45053957	45054025	True	NM_182985,NM_001145112	chr15,chr15	+,-	TRIM69,PATL2	-25448,-84871
chr13:37574861-37575266	chr13	+	37574862	37575268	True	NM_001142364,NM_181503,NM_013338	chr13,chr13,chr13	-,+,-	ALG5,EXOSC8,ALG5	-1358,-235,-1358
chr1:203096151-203096830	chr1	+	203096202	203096718	True	NM_001048230,NM_000674,NM_002479	chr1,chr1,chr1	+,+,-	ADORA1,ADORA1,MYOG	117,117,-40825
chr17:7807209-7807661	chr17	+	7807224	7807626	True	NR_003000,NR_024349	chr17,chr17	+,-	SCARNA21,LOC284023	1814,11689
chr8:103558998-103560565	chr8	+	103559005	103560438	True	NM_024410,NM_001032282	chr8,chr8	+,-	ODF1,KLF10	3409,105781
chr19:42748730-42749662	chr19	+	42748796	42749546	True	NM_006494,NM_019884,NM_133444	chr19,chr19,chr19	-,-,+	ERF,GSK3A,ZNF526	9813,-2060,-24355
chr12:108534613-108535171	chr12	+	108534720	108534800	True	NM_014653,NM_001142345	chr12,chr12	+,-	WSCD2,CMKLR1	-11260,179689
chr1:27650186-27650536	chr1	+	27650284	27650503	True	NR_037576,NM_004672,NR_037577,NM_032125,NR_037580,NR_033926	chr1,chr1,chr1,chr1,chr1,chr1	+,-,+,+,+,+	TMEM222,MAP3K6,TMEM222,TMEM222,TMEM222,LOC644961	-1711,42897,-1711,-1711,-1711,18
chr3:52272357-52272716	chr3	+	52272426	52272658	True	NM_001122870,NM_007284,NM_144641	chr3,chr3,chr3	+,-,+	PPM1M,TWF2,PPM1M	7527,575,7150
chr19:50979428-50979693	chr19	+	50979514	50979604	True	NM_138411,NM_175063,NM_206538	chr19,chr19,chr19	-,+,+	FAM71E1,C19orf63,C19orf63	449,131,131
chr8:11352117-11352431	chr8	+	11352116	11352478	True	NM_001715,NM_053279	chr8,chr8	+,-	BLK,FAM167A	-647,-27840
chr17:616718-617139	chr17	+	616937	617007	True	NM_018289,NM_024792,NM_001128159	chr17,chr17,chr17	-,+,-	VPS53,FAM57A,VPS53	1139,18839,1139
chr3:183734244-183735055	chr3	+	183734480	183735104	True	NM_182537,NM_001023587,NM_005688	chr3,chr3,chr3	+,-,-	HTR3D,ABCC5,ABCC5	14227,673,673
chr17:8287040-8287521	chr17	+	8287057	8287361	True	NM_000987,NM_153007	chr17,chr17	-,+	RPL26,ODF4	-492,-43920
chr15:63336401-63338057	chr15	+	63336661	63337689	True	NM_001018020,NM_001018007,NM_001018004,NM_001018005,NM_001018008,NM_000366,NM_001018006,NM_015920	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,-	TPM1,TPM1,TPM1,TPM1,TPM1,TPM1,TPM1,RPS27L	-1875,-1875,-1875,-1875,2946,-1875,-1875,112115
chr6:35436187-35436402	chr6	+	35436191	35436399	True	NM_003214,NM_007104	chr6,chr6	-,+	TEAD3,RPL10A	28512,-64
chr22:17640141-17640438	chr22	+	17640201	17640457	True	NM_017829,NM_033070,NR_024482,NR_024483	chr22,chr22,chr22,chr22	-,-,+,+	CECR5,CECR5,CECR4,CECR4	5770,-32,-15,-15
chr2:27596388-27597594	chr2	+	27596633	27597594	True	NM_001201459,NM_001034116,NM_014748,NM_015636,NM_144631,NM_172195	chr2,chr2,chr2,chr2,chr2,chr2	-,-,+,-,-,-	ZNF513,EIF2B4,SNX17,EIF2B4,ZNF513,EIF2B4	5767,-3309,-3296,-3309,6067,-3714
chr16:30996662-30997080	chr16	+	30996667	30997079	True	NM_001142778,NM_025193,NM_052874,NM_001142777	chr16,chr16,chr16,chr16	+,+,-,+	HSD3B7,HSD3B7,STX1B,HSD3B7	-199,-199,24800,-199
chr11:118448253-118449477	chr11	+	118448318	118449393	True	NM_001655,NM_001142281,NM_020153	chr11,chr11,chr11	+,+,-	ARCN1,ARCN1,IFT46	-5274,-5274,-11527
chr4:41985115-41985688	chr4	+	41985214	41985704	True	NM_006345,NM_001159547,NM_001029955	chr4,chr4,chr4	+,-,+	SLC30A9,BEND4,DCAF4L1	6818,169247,-1553
chr7:74589540-74590267	chr7	+	74589565	74590173	True	NM_001003795,NR_003187	chr7,chr7	+,-	GTF2IRD2B,NCF1C	-81269,-1749
chr7:74589540-74590267	chr7	-	74185959	74186565	False	NM_173537,NM_000265	chr7,chr7	-,+	GTF2IRD2,NCF1	81326,1743
chr7:74589540-74590267	chr7	-	72632254	72632864	False	NR_002164,NR_003186	chr7,chr7	-,+	GTF2IRD2P1,NCF1B	52844,1809
chr5:142150992-142152340	chr5	+	142151013	142152376	True	NM_015071,NM_001135608,NR_026696	chr5,chr5,chr5	+,+,-	ARHGAP26,ARHGAP26,FGF1	-773,-773,-73378
chr9:67792307-67793176	chr9	+	67792470	67792922	True	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	1317,133838
chr9:67792307-67793176	chr9	-	44991498	44991812	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-1313,-1360768
chr9:67792307-67793176	chr9	-	45728289	45728741	False	NM_001145196,NR_024060	chr9,chr9	-,+	FAM75A6,FAM27A	-2097559,-1311
chr9:34328307-34328759	chr9	+	34328307	34328799	True	NM_194313,NM_147172,NM_147173,NM_001161	chr9,chr9,chr9,chr9	-,+,+,+	KIF24,NUDT2,NUDT2,NUDT2	449,704,704,704
chr21:33983536-33983817	chr21	+	33983748	33983838	True	NM_021254,NR_024622,NR_036552	chr21,chr21,chr21	-,+,-	C21orf59,C21orf49,C21orf59	1130,160572,1125
chr8:143857930-143858184	chr8	+	143857939	143858233	True	NM_177477,NM_177476,NM_177457,NM_016647,NM_003695,NM_177458,NM_023946	chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,+,-,-,-	LYNX1,LYNX1,LYNX1,C8orf55,LY6D,LYNX1,LYNX1	561,254,1457,-49369,9825,-6693,1456
chr4:78979086-78979919	chr4	+	78979210	78979851	True	NM_025074,NM_144571,NM_001166133	chr4,chr4,chr4	+,-,+	FRAS1,CNOT6L,FRAS1	-537,-238666,-537
chr19:48109170-48110679	chr19	+	48109436	48110368	True	NM_015711,NM_001101419	chr19,chr19	+,-	GLTSCR1,ZNF541	1084,-50323
chr8:80943974-80945305	chr8	+	80944058	80945067	True	NM_007029,NM_014018	chr8,chr8	+,-	STMN2,MRPS28	-421060,-1552
chr6:47007644-47008130	chr6	+	47007740	47007912	True	NM_025048,NM_153840,NM_005588	chr6,chr6,chr6	-,-,+	GPR110,GPR110,MEP1A	2222,2222,-246704
chr1:87381170-87381385	chr1	+	87381169	87381409	True	NM_001134492,NM_004261,NM_012262,NM_203341	chr1,chr1,chr1,chr1	+,-,+,-	HS2ST1,SEP15,HS2ST1,SEP15	-885,-1062,-885,-1062
chr7:42974136-42974692	chr7	+	42974187	42974725	True	NM_031903,NM_002787	chr7,chr7	+,-	MRPL32,PSMA2	-2306,-2382
chrX:24069803-24070636	chrX	+	24069823	24070680	True	NM_030624,NM_001415	chrX,chrX	-,+	KLHL15,EIF2S3	-24520,2384
chr3:21447650-21447958	chr3	+	21447827	21447955	True	NR_002311,NM_024697	chr3,chr3	+,-	VENTXP7,ZNF385D	-660,344911
chr3:143690244-143690582	chr3	+	143690329	143690507	True	NM_173653,NM_173552,NM_001134470	chr3,chr3,chr3	-,+,+	SLC9A9,C3orf58,C3orf58	-122956,132,1659
chr10:31606811-31607262	chr10	+	31606902	31607204	True	NM_001174093,NM_001174094,NM_001174095,NM_001174096,NM_030751,NR_024284,NM_001128128	chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,-,+	ZEB1,ZEB1,ZEB1,ZEB1,ZEB1,LOC220930,ZEB1	896,2859,896,896,896,870,2859
chr2:216975302-216976169	chr2	+	216975366	216975939	True	NM_018441,NM_021141	chr2,chr2	-,+	PECR,XRCC5	-28827,-1405
chr8:55050673-55051650	chr8	+	55051191	55051393	True	NM_014175,NM_006330	chr8,chr8	+,-	MRPL15,LYPLA1	-3463,-36614
chr11:108093558-108093779	chr11	+	108093562	108093822	True	NM_000051,NM_002519	chr11,chr11	+,-	ATM,NPAT	-54,-197
chr9:103802114-103803063	chr9	+	103802285	103803103	True	NM_207299,NM_001127610	chr9,chr9	+,-	LPPR1,BAAT	-11320,342750
chr19:10046451-10046828	chr19	+	10046450	10046648	True	NM_058164,NM_015725	chr19,chr19	-,+	OLFM2,RDH8	472,77276
chr16:28566651-28567536	chr16	+	28566835	28567334	True	NM_138414,NM_012385	chr16,chr16	+,-	CCDC101,NUPR1	-1645,-16340
chr8:86090266-86091985	chr8	+	86090293	86091659	True	NM_001099670,NM_001951,NM_001083588,NM_001083589	chr8,chr8,chr8,chr8	-,+,+,+	C8orf59,E2F5,E2F5,E2F5	41034,-731,-731,8250
chr2:24303821-24305523	chr2	+	24303955	24305563	True	NM_147184,NM_054033,NM_004881,NM_016047	chr2,chr2,chr2,chr2	-,+,-,-	TP53I3,FKBP1B,TP53I3,SF3B14	2142,-31422,2215,-4641
chr3:128780349-128780729	chr3	+	128780392	128780772	True	NM_001204886,NM_000174	chr3,chr3	-,+	RAB43,GP9	59925,-798
chr1:11940500-11940756	chr1	+	11940672	11940796	True	NM_002521,NR_037806	chr1,chr1	-,+	NPPB,NPPA-AS1	-21680,-40347
chr8:88018919-88019144	chr8	+	88018955	88019161	True	NM_019098,NM_173538	chr8,chr8	-,+	CNGB3,CNBD1	-263052,-140332
chr1:147403786-147404327	chr1	+	147404202	147404264	True	NR_003377,NM_016334	chr1,chr1	-,+	PDZK1P1,GPR89B	80117,-3752
chr11:126082025-126083899	chr11	+	126082067	126083912	True	NM_001144827,NM_032795,NM_024556	chr11,chr11,chr11	-,-,+	RPUSD4,RPUSD4,FAM118B	-480,-480,-499
chr6:160514549-160515784	chr6	+	160514728	160515620	True	NR_003288,NM_003058	chr6,chr6	+,-	LOC729603,SLC22A2	-665,164395
chr1:112933339-112933835	chr1	+	112933443	112933768	True	NM_018704,NR_036210	chr1,chr1	+,-	CTTNBP2NL,MIR4256	5031,70738
chr14:24631502-24632968	chr14	+	24631576	24632646	True	NM_001048205,NM_005132,NM_006084,NM_002818	chr14,chr14,chr14,chr14	+,+,+,-	REC8,REC8,IRF9,PSME2	8587,8587,-1205,-15721
chr10:111970741-111971093	chr10	+	111970751	111971061	True	NM_001008541,NM_005871,NM_130439	chr10,chr10,chr10	+,-,+	MXI1,SMNDC1,MXI1	-813,93696,-3439
chr11:45115582-45115886	chr11	+	45115650	45115758	True	NM_006034,NM_020229	chr11,chr11	-,+	TP53I11,PRDM11	-143042,-137
chr1:93425609-93426616	chr1	+	93425748	93426484	True	NM_001006605,NM_001164391	chr1,chr1	-,+	FAM69A,MTF2	645,118307
chr17:42146287-42147093	chr17	+	42146581	42146689	True	NR_028581,NR_028582,NM_138387,NM_152344	chr17,chr17,chr17,chr17	+,+,+,-	G6PC3,G6PC3,G6PC3,LSM12	1408,1408,1408,-1594
chr1:41133644-41134637	chr1	+	41134222	41134473	True	NM_001142587,NM_014747	chr1,chr1	+,-	NFYC,RIMS3	22768,-2898
chr16:21610457-21610691	chr16	+	21610480	21610736	True	NM_001077180,NM_016025,NM_005849	chr16,chr16,chr16	+,+,-	METTL9,METTL9,IGSF6	119,119,53286
chr11:111811815-111812327	chr11	+	111811954	111812263	True	NM_001885,NM_001037954	chr11,chr11	-,+	CRYAB,DIXDC1	-29481,-4079
chr3:47845152-47845680	chr3	+	47845328	47845706	True	NM_003074,NM_014966,NM_138615	chr3,chr3,chr3	-,+,+	SMARCC1,DHX30,DHX30	-21923,-980,-980
chr7:95226033-95226410	chr7	+	95226168	95226447	True	NM_016116,NM_002612	chr7,chr7	+,-	ASB4,PDK4	-111006,-243
chr1:215255766-215256086	chr1	+	215255779	215256095	True	NM_001017425,NM_014217,NM_005401	chr1,chr1,chr1	+,+,-	KCNK2,KCNK2,PTPN14	464,464,-530755
chr5:130602130-130602906	chr5	+	130602505	130602590	True	NR_024610,NM_001038702,NM_020240	chr5,chr5,chr5	-,+,+	HINT1,CDC42SE2,CDC42SE2	-101471,-2864,-2864
chr1:104619960-104620260	chr1	+	104620068	104620314	True	NM_001008221,NR_033990	chr1,chr1	-,+	AMY1A,LOC100129138	-380995,-4487
chr20:5732244-5734222	chr20	+	5732392	5734121	True	NM_019593,NM_152504	chr20,chr20	-,+	GPCPD1,C20orf196	-140720,-1402
chr1:26644101-26645159	chr1	+	26644218	26645208	True	NM_145345,NM_001803	chr1,chr1	-,+	UBXN11,CD52	-90,-100
chr1:184722146-184723402	chr1	+	184722182	184723292	True	NM_025191,NM_007212	chr1,chr1	-,+	EDEM3,RNF2	799,291258
chr16:67744558-67746398	chr16	+	67744612	67746075	True	NR_027399,NR_027398,NM_030819,NM_001012984	chr16,chr16,chr16,chr16	-,-,-,+	GFOD2,GFOD2,GFOD2,C16orf86	7261,7261,7261,-43953
chr7:63586763-63587017	chr7	+	63586789	63587045	True	NM_001159524,NM_178558	chr7,chr7	+,-	ZNF735,ZNF680	80535,436510
chr10:94058425-94058872	chr10	+	94058590	94058918	True	NM_017824,NM_014912	chr10,chr10	+,-	MARCH5,CPEB3	-7724,-7715
chr8:26722771-26723267	chr8	+	26722804	26723204	True	NM_033302,NM_033303,NM_000680,NM_033304,NM_001386	chr8,chr8,chr8,chr8,chr8	-,-,-,-,+	ADRA1A,ADRA1A,ADRA1A,ADRA1A,DPYSL2	-28,-28,-28,-28,-287434
chr3:142720938-142722624	chr3	+	142721072	142722506	True	NM_001080415,NR_034032	chr3,chr3	+,-	U2SURP,LOC100289361	-753,-763
chr5:138211075-138212883	chr5	+	138211313	138212833	True	NM_015564,NM_001903	chr5,chr5	-,+	LRRTM2,CTNNA1	-256,-122258
chr19:19630398-19630946	chr19	+	19630419	19630771	True	NM_032037,NM_001190328,NM_198537,NM_015965	chr19,chr19,chr19,chr19	-,+,+,+	TSSK6,YJEFN3,YJEFN3,NDUFA13	-3950,8898,8898,-3453
chr2:97310355-97310905	chr2	+	97310361	97310919	True	NM_017991,NM_001113382,NM_001115016	chr2,chr2,chr2	-,+,-	KIAA1310,FER1L5,KIAA1310	-6246,-1847,-6246
chr11:108423642-108425505	chr11	+	108424071	108425362	True	NM_015065,NM_004398	chr11,chr11	-,+	EXPH5,DDX10	39070,110453
chr6:34760300-34760939	chr6	+	34760557	34760955	True	NM_005643,NM_017754	chr6,chr6	-,+	TAF11,UHRF1BP1	94914,-814
chr13:99849618-99851577	chr13	+	99849749	99851295	True	NM_177967,NR_026644,NR_036532,NR_036531,NM_001144072	chr13,chr13,chr13,chr13,chr13	+,+,-,-,+	UBAC2,UBAC2,LOC100289373,LOC100289373,UBAC2	1867,1867,1764,1766,1383
chr18:63418339-63418602	chr18	+	63418425	63418651	True	NM_021153,NM_004361,NM_033646	chr18,chr18,chr18	-,+,+	CDH19,CDH7,CDH7	852615,-319,-988
chr22:38478859-38479286	chr22	+	38478974	38479334	True	NM_013356,NM_012407	chr22,chr22	-,+	SLC16A8,PICK1	8,-25763
chr10:101999117-102000699	chr10	+	101999413	102000719	True	NM_005063,NR_002954	chr10,chr10	+,-	SCD,SNORA12	106052,-2354
chr9:38065172-38066954	chr9	+	38065533	38066855	True	NM_003028,NM_024345	chr9,chr9	-,+	SHB,DCAF10	2405,-264794
chr3:37285800-37287279	chr3	+	37285814	37287178	True	NM_002078,NM_017724,NM_001172713	chr3,chr3,chr3	+,-,+	GOLGA4,LRRFIP2,GOLGA4	-1183,-67963,-1183
chr8:64177004-64177949	chr8	+	64177074	64177918	True	NM_152758,NM_000370	chr8,chr8	+,-	YTHDF3,TTPA	-96004,-178462
chr11:69063309-69063551	chr11	+	69063322	69063544	True	NM_145015,NM_138768	chr11,chr11	-,+	MRGPRF,MYEOV	-282472,-1751
chr2:73495201-73496050	chr2	+	73495242	73496042	True	NR_029403,NM_001080410	chr2,chr2	+,-	CCT7,FBXO41	-33929,766
chr9:115915312-115916228	chr9	+	115915464	115916155	True	NM_001860,NR_024376	chr9,chr9	+,-	SLC31A2,NCRNA00256B	-2279,-41507
chr10:61472243-61473141	chr10	+	61472390	61472790	True	NM_194298,NM_001143774	chr10,chr10	-,+	SLC16A9,PHYHIPL	-2741,-535221
chr2:27805523-27805753	chr2	+	27805576	27805690	True	NM_032266,NM_001142683,NM_032434	chr2,chr2,chr2	+,-,+	C2orf16,CCDC121,ZNF512	-6238,46105,202
chr5:77072363-77072727	chr5	+	77072463	77072775	True	NM_003719,NM_004607	chr5,chr5	+,-	PDE8B,TBCA	-565809,-278
chr9:32393936-32395650	chr9	+	32394074	32395548	True	NM_014314,NM_002197	chr9,chr9	-,+	DDX58,ACO1	130824,-9524
chr3:32439148-32440196	chr3	+	32439241	32440113	True	NM_181472,NM_017801,NM_138410	chr3,chr3,chr3	+,-,+	CMTM7,CMTM6,CMTM7	-6130,104340,-6130
chr11:1328661-1329490	chr11	+	1328950	1329344	True	NM_019009,NR_029409	chr11,chr11	-,+	TOLLIP,LOC255512	1598,1593
chr22:31639506-31641237	chr22	+	31639644	31641222	True	NM_001031801,NM_001135911,NM_016733	chr22,chr22,chr22	+,-,+	LIMK2,PIK3IP1,LIMK2	3125,47348,3125
chr3:66542682-66543215	chr3	+	66542681	66543240	True	NR_028475,NM_015541	chr3,chr3	+,-	SLC25A26,LRIG1	-271573,7662
chr13:114103913-114104787	chr13	+	114104015	114104421	True	NM_017905,NM_138430,NM_199162	chr13,chr13,chr13	+,-,-	TMCO3,ADPRHL1,ADPRHL1	40886,3468,-558
chr7:72995995-72996832	chr7	+	72996096	72996741	True	NM_001077621,NM_012453	chr7,chr7	+,-	VPS37D,TBL2	85432,-3083
chr3:179182121-179182651	chr3	+	179182214	179182658	True	NM_004301,NM_021629	chr3,chr3	+,-	ACTL6A,GNB4	98049,-12843
chr14:41146200-41148020	chr14	+	41146750	41148035	True	NM_152447,NM_203301	chr14,chr14	+,-	LRFN5,FBXO33	928728,-1245046
chr4:186126704-186127544	chr4	+	186127176	186127547	True	NM_020827,NM_031953	chr4,chr4	-,+	KIAA1430,SNX25	-1994,3736
chr11:121163579-121163825	chr11	+	121163646	121163778	True	NR_029671,NM_001024956,NM_006918	chr11,chr11,chr11	-,+,+	MIR125B1,SC5DL,SC5DL	806824,-120,-309
chr8:131416420-131417214	chr8	+	131416464	131417250	True	NM_015137,NM_018482	chr8,chr8	+,-	EFR3A,ASAP1	1499105,-2247
chr4:128885802-128886101	chr4	+	128886005	128886103	True	NM_001039717,NM_152778	chr4,chr4	+,-	C4orf29,MFSD8	357,1086
chr13:46047297-46047585	chr13	+	46047332	46047581	True	NM_001204476,NM_001010875,NM_031431	chr13,chr13,chr13	+,-,+	COG3,SLC25A30,COG3	-8353,-54816,-8353
chr20:1445593-1446949	chr20	+	1445687	1446897	True	NM_182483,NM_016143,NM_014723,NM_018839	chr20,chr20,chr20,chr20	-,-,+,-	NSFL1C,NSFL1C,SNPH,NSFL1C	1570,1570,-198792,1570
chr18:61143916-61145257	chr18	+	61143927	61145299	True	NM_004869,NM_002639	chr18,chr18	-,+	VPS4B,SERPINB5	-54175,-122
chr6:108487433-108487753	chr6	+	108487522	108487804	True	NM_003269,NM_014028	chr6,chr6	+,-	NR2E1,OSTM1	-358,-91581
chr2:159653861-159654158	chr2	+	159653901	159654038	True	NM_001171637,NM_001017920	chr2,chr2	-,+	CCDC148,DAPL1	-340636,-2123
chr15:102502337-102504165	chr15	+	102502441	102504040	True	NR_026819,NR_034090	chr15,chr15	+,-	FAM138E,DDX11L9	-7404,15306
chr11:124976499-124977857	chr11	+	124976608	124977879	True	NM_198277,NM_001080546	chr11,chr11	+,-	SLC37A2,TMEM218	-43646,-3403
chr1:206728646-206728938	chr1	+	206728714	206728828	True	NM_182665,NM_001201478	chr1,chr1	+,-	RASSF5,EIF2D	1663,57126
chr2:176973773-176974047	chr2	+	176973773	176974077	True	NM_002148,NM_001080458,NM_021192,NM_021193	chr2,chr2,chr2,chr2	+,-,+,+	HOXD10,EVX2,HOXD11,HOXD12	7414,-25083,-1741,-9295
chr5:523120-523362	chr5	+	523240	523336	True	NM_007277,NM_004174	chr5,chr5	+,-	EXOC3,SLC9A3	-79957,1263
chr8:20112948-20113440	chr8	+	20112986	20113279	True	NM_021020,NM_001693	chr8,chr8	-,+	LZTS1,ATP6V1B2	-183,-58333
chr19:38807594-38807938	chr19	+	38807626	38807960	True	NM_001145462,NM_001145461,NM_001039671,NM_001039672,NM_001039673,NM_033557,NM_001145463,NM_004823	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,+	YIF1B,YIF1B,YIF1B,YIF1B,YIF1B,YIF1B,YIF1B,KCNK6	-1181,-1181,-1181,-1020,-1020,-7117,-1020,2523
chr17:48229263-48229868	chr17	+	48229456	48229902	True	NM_032595,NM_000023	chr17,chr17	-,+	PPP1R9B,SGCA	-1579,13463
chr22:37258506-37259046	chr22	+	37258701	37259057	True	NM_013416,NM_000631,NM_002854	chr22,chr22,chr22	+,+,-	NCF4,NCF4,PVALB	-1722,-1722,-43184
chr4:169351272-169351979	chr4	+	169351603	169352001	True	NM_001012967,NM_001166108	chr4,chr4	-,+	DDX60L,PALLD	49687,66215
chr3:127840232-127841881	chr3	+	127840655	127841712	True	NM_021937,NM_003707	chr3,chr3	+,-	EEFSEC,RUVBL1	30600,1010
chr3:184034291-184035122	chr3	+	184034390	184035022	True	NM_004953,NM_198244,NM_198242,NM_198241,NM_001194946,NM_001194947,NM_001171087,NR_003055,NM_182917	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,+,+,-,+,+	EIF4G1,EIF4G1,EIF4G1,EIF4G1,EIF4G1,EIF4G1,CLCN2,SNORD66,EIF4G1	3078,-2159,-2159,-2159,-2159,-2159,44419,8461,-1490
chr11:17491727-17493247	chr11	+	17491866	17493136	True	NM_000352,NM_001202439	chr11,chr11	-,+	ABCC8,DKFZp686O24166	5363,-118609
chr16:2017575-2017791	chr16	+	2017590	2017832	True	NR_003142,NM_174903,NM_002952,NR_002327,NR_002326,NM_006453,NR_003020,NM_004548	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,-,-,-,+,+,+	SNHG9,RNF151,RPS2,SNORA10,SNORA64,TBL3,SNORA78,NDUFB10	-2644,-766,-2763,-5123,-4483,4231,-2456,-8124
chr17:74072491-74072701	chr17	+	74072579	74072747	True	NM_180990,NM_003857,NM_014230	chr17,chr17,chr17	+,+,-	ZACN,GALR2,SRP68	2515,-1738,-3972
chr2:14772157-14772407	chr2	+	14772160	14772292	True	NM_015909,NM_145175	chr2,chr2	-,+	NBAS,FAM84A	929212,517
chr11:125037260-125037468	chr11	+	125037284	125037514	True	NM_001080546,NM_022062	chr11,chr11	-,+	TMEM218,PKNOX2	-64079,-2776
chr1:160285359-160286070	chr1	+	160285373	160285872	True	NM_001098398,NR_002190	chr1,chr1	-,+	COPA,SUMO1P3	27533,1182
chr2:160760311-160760626	chr2	+	160760344	160760626	True	NM_001198760,NM_002349,NM_001198759,NM_022826	chr2,chr2,chr2,chr2	-,-,-,+	LY75-CD302,LY75,LY75-CD302,MARCH7	691,691,691,-191385
chr19:7051530-7051968	chr19	+	7051598	7051680	True	NM_144614,NM_001164425	chr19,chr19	+,-	MBD3L2,MBD3L3	-2298,7015
chr2:149892589-149894308	chr2	+	149892958	149894260	True	NM_015702,NM_177964	chr2,chr2	-,+	MMADHC,LYPD6B	550120,720
chr15:68520372-68520906	chr15	+	68520457	68520867	True	NM_017882,NM_015322	chr15,chr15	-,+	CLN6,FEM1B	1263,49273
chr10:88513958-88514583	chr10	+	88514045	88514397	True	NM_024756,NM_004329	chr10,chr10	-,+	MMRN2,BMPR1A	203078,1998
chr4:77173333-77174546	chr4	+	77173510	77174249	True	NM_005506,NM_001136570	chr4,chr4	-,+	SCARB2,FAM47E	-38458,-715
chr10:75415767-75417672	chr10	+	75415842	75416967	True	NM_024875,NM_001114133,NM_004922	chr10,chr10,chr10	-,-,+	SYNPO2L,SYNPO2L,SEC24C	-5055,-10,87163
chr12:21290815-21291145	chr12	+	21290958	21291161	True	NM_021094,NM_006446	chr12,chr12	-,+	SLCO1A2,SLCO1B1	196722,-6886
chr6:44055877-44057086	chr6	+	44055916	44056986	True	NM_018426,NM_032111	chr6,chr6	+,-	TMEM63B,MRPL14	38389,38255
chr6:112022566-112024130	chr6	+	112023010	112024165	True	NR_034109,NM_153047	chr6,chr6	+,-	LOC643749,FYN	-218398,17150
chr5:173009856-173011216	chr5	+	173009868	173011264	True	NR_027108,NR_027109,NM_001159651	chr5,chr5,chr5	+,+,-	LOC285593,LOC285593,BOD1	-3273,-3262,32452
chr20:24911639-24913590	chr20	+	24911801	24913608	True	NM_003650,NM_020531	chr20,chr20	+,-	CST7,C20orf3	16257,59867
chr1:205011296-205011829	chr1	+	205011308	205011611	True	NM_203376,NM_005076	chr1,chr1	-,+	TMEM81,CNTN2	42034,728
chr1:246954493-246954906	chr1	+	246954496	246954836	True	NR_015422,NM_015446	chr1,chr1	+,-	LOC149134,AHCTF1	-1628,139940
chr22:24061930-24062517	chr22	+	24062169	24062322	True	NR_024448,NM_153615	chr22,chr22	-,+	LOC91316,RGL4	-2559,-29182
chr4:132297028-132299006	chr4	+	132297226	132298496	True	NM_144643,NM_020815	chr4,chr4	-,+	SCLT1,PCDH10	-2282462,1771973
chr2:36939148-36939481	chr2	+	36939330	36939462	True	NM_053276,NM_005102	chr2,chr2	+,-	VIT,FEZ2	-15548,-113998
chr17:60217954-60218264	chr17	+	60218078	60218262	True	NM_001144933,NM_005121	chr17,chr17	+,-	EFCAB3,MED13	229316,-75435
chr17:73721435-73721871	chr17	+	73721702	73721914	True	NM_000154,NM_000213,NM_001005619,NM_001005731	chr17,chr17,chr17,chr17	-,+,+,+	GALK1,ITGB4,ITGB4,ITGB4	39416,-4237,-977,-4237
chr2:241527883-241528218	chr2	+	241527994	241528205	True	NM_017844,NM_023083,NM_023085	chr2,chr2,chr2	-,+,+	ANKMY1,CAPN10,CAPN10	-30589,-1912,-1912
chr9:7802281-7803169	chr9	+	7802281	7803177	True	NM_033428,NM_015061	chr9,chr9	-,+	C9orf123,KDM4C	-2482,-1044691
chr4:77871910-77872289	chr4	+	77872192	77872268	True	NM_001029870,NM_018243	chr4,chr4	-,+	ANKRD56,SEPT11	-53190,-1348
chr6:30070340-30070935	chr6_qbl_hap6	+	1363875	1363939	False	NM_007028,NM_138700	chr6_qbl_hap6,chr6_qbl_hap6	-,+	TRIM31,TRIM40	9938,33517
chr6:30070340-30070935	chr6_mcf_hap5	+	1452792	1452856	False	NM_007028,NM_138700	chr6_mcf_hap5,chr6_mcf_hap5	-,+	TRIM31,TRIM40	9942,33550
chr6:30070340-30070935	chr6_mann_hap4	+	1369469	1369533	False	NM_007028,NM_021959	chr6_mann_hap4,chr6_mann_hap4	-,+	TRIM31,PPP1R11	9937,-35996
chr6:30070340-30070935	chr6_ssto_hap7	+	1401362	1401426	False	NM_007028,NM_138700	chr6_ssto_hap7,chr6_ssto_hap7	-,+	TRIM31,TRIM40	9935,33543
chr6:30070340-30070935	chr6	+	30070909	30070973	True	NM_007028,NM_138700	chr6,chr6	-,+	TRIM31,TRIM40	9944,33536
chr1:53309174-53309448	chr1	+	53309249	53309349	True	NM_001198961,NM_001004339	chr1,chr1	-,+	ECHDC2,ZYG11A	78147,-1117
chr3:195347310-195347702	chr3	+	195347313	195347635	True	NM_001647,NR_003265	chr3,chr3	-,+	APOD,SDHAP2	-36237,37274
chr3:195347310-195347702	chr3	+	195453736	195473036	False	NM_001098516,NM_004532,NM_152673	chr3,chr3,chr3	+,-,+	MUC20,MUC4,MUC20	-2689,85220,-6034
chr12:54400514-54401140	chr12	+	54400516	54401124	True	NM_006897,NM_022658,NR_003084,NM_014620,NR_003716,NM_153693	chr12,chr12,chr12,chr12,chr12,chr12	+,+,+,+,-,+	HOXC9,HOXC8,HOXC5,HOXC4,HOTAIR,HOXC6	-6690,1765,9517,9517,-38001,9517
chr10:124607608-124609269	chr10	+	124607858	124609201	True	NR_037912,NR_027282,NM_022034	chr10,chr10,chr10	-,+,-	CUZD1,LOC399815,CUZD1	-2167,29947,-2167
chr15:72978295-72978539	chr15	+	72978480	72978546	True	NR_002780,NM_033028	chr15,chr15	-,+	HIGD2B,BBS4	0,-5
chr2:26100036-26100356	chr2	+	26100059	26100385	True	NM_018263,NM_016131	chr2,chr2	-,+	ASXL2,RAB10	977,156343
chr17:40336899-40337409	chr17	+	40336942	40337456	True	NR_024573,NM_012285,NM_033194,NM_032484,NM_001524,NM_001142622,NM_001142623	chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,-,-,-,-	GHDC,KCNH4,HSPB9,GHDC,HCRT,GHDC,GHDC	8849,-3646,-62238,9144,64,9144,9144
chr2:65460219-65462024	chr2	+	65461428	65462049	True	NM_001005386,NM_005722,NM_015543	chr2,chr2,chr2	+,+,-	ACTR2,ACTR2,RAB1A	-6658,-6658,-103993
chr22:29167027-29167945	chr22	+	29167224	29167763	True	NM_173510,NM_001079539	chr22,chr22	+,-	CCDC117,XBP1	898,28847
chr11:94856957-94858779	chr11	+	94857156	94858495	True	NM_144665,NM_015036	chr11,chr11	-,+	SESN3,ENDOD1	105801,-34243
chr9:6647747-6648652	chr9	+	6648092	6648614	True	NM_000170,NM_001146696	chr9,chr9	-,+	GLDC,KDM4C	-2400,72248
chr11:72506128-72506794	chr11	+	72506445	72506585	True	NM_033388,NM_006645	chr11,chr11	+,-	ATG16L2,STARD10	18865,-1695
chr16:29466418-29466624	chr16	+	29466467	29466639	True	NM_177552,NR_037608,NR_037609,NM_001017390,NM_001014999,NM_001015000,NM_024044,NM_001031827,NR_002454,NM_001039182,NM_178044	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,+,+,-,+,-,+	SULT1A3,SLX1A-SULT1A3,SLX1B-SULT1A4,SULT1A4,SLX1A,SLX1A,SLX1B,BOLA2,LOC606724,BOLA2B,SLX1B	4567,-106,-106,4567,-696,-696,-696,-182,-5852,-182,-696
chr16:29466418-29466624	chr16	+	30205809	30205981	False	NM_177552,NR_037608,NR_037609,NM_001017390,NM_001014999,NM_001015000,NM_024044,NM_001031827,NR_002454,NM_001039182,NM_178044	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,+,+,-,+,-,+	SULT1A3,SLX1A-SULT1A3,SLX1B-SULT1A4,SULT1A4,SLX1A,SLX1A,SLX1B,BOLA2,LOC606724,BOLA2B,SLX1B	4567,-106,-106,4567,-696,-696,-696,-182,-5855,-182,-696
chr5:95767908-95768152	chr5	+	95768023	95768181	True	NM_001190442,NM_001177875,NM_000439	chr5,chr5,chr5	+,-,-	CAST,PCSK1,PCSK1	229559,-160,854
chr9:132405102-132405575	chr9	+	132405438	132405498	True	NM_014064,NM_017873,NM_001202403,NM_177999	chr9,chr9,chr9,chr9	+,-,-,-	METTL11A,ASB6,ASB6,ASB6	-17054,-990,-990,-990
chr10:75685527-75686944	chr10	+	75685752	75686674	True	NM_002658,NM_001001791	chr10,chr10	+,-	PLAU,C10orf55	-14941,-3217
chr2:219128091-219128367	chr2	+	219128095	219128289	True	NM_015488,NM_001077191,NM_001087,NM_170699,NM_001077194,NM_001077399	chr2,chr2,chr2,chr2,chr2,chr2	+,+,-,+,+,+	PNKD,GPBAR1,AAMP,GPBAR1,GPBAR1,PNKD	6825,-2408,6654,-2408,-2408,6825
chr13:44146110-44147318	chr13	+	44146546	44147338	True	NM_001128303,NM_001127615	chr13,chr13	+,-	C13orf31,ENOX1	306081,56325
chr3:128840752-128841189	chr3	+	128840833	128841033	True	NM_198490,NM_001204888,NM_001204885,NM_001204884,NM_001204887,NM_001204886,NM_001204883,NM_000174	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,-,-,-,+	RAB43,RAB43,RAB43,RAB43,RAB43,RAB43,RAB43,GP9	-186,-186,-68,10,-186,-186,10,-61239
chr17:74304344-74304917	chr17	+	74304371	74304814	True	NM_032134,NM_182565	chr17,chr17	-,+	QRICH2,FAM100B	-610,-43136
chr11:6291655-6291909	chr11	+	6291661	6291953	True	NM_176875,NM_032127	chr11,chr11	+,-	CCKBR,FAM160A2	-10746,-35720
chr17:44322067-44322277	chr17_ctg5_hap1	-	544604	544678	False	NM_001193465,NR_034172	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	KIAA1267,LOC644246	18819,50761
chr17:44322067-44322277	chr17_ctg5_hap1	+	1189744	1189818	False	NR_026901,NR_037772	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LOC644172,CRHR1	-1359,-19291
chr17:44322067-44322277	chr17_ctg5_hap1	+	1409304	1409378	False	NR_002940,NM_016632	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LRRC37A4,ARL17A	71998,104556
chr17:44322067-44322277	chr17	+	44322205	44322279	True	NM_001193465,NM_014834	chr17,chr17	-,+	KIAA1267,LRRC37A	-19465,50217
chr17:44322067-44322277	chr17	-	43678368	43678442	False	NR_026901,NR_037772	chr17,chr17	-,+	LOC644172,CRHR1	1359,19267
chr15:78233661-78234091	chr15	+	78234052	78234124	True	NM_001101404,NR_027024	chr15,chr15	+,-	SH2D7,LOC645752	150802,-14864
chr17:7155852-7156171	chr17	+	7155860	7156170	True	NM_015343,NM_203415,NM_203414,NM_203413,NM_015362,NM_001143775	chr17,chr17,chr17,chr17,chr17,chr17	-,+,+,+,+,-	CTDNEP1,C17orf81,C17orf81,C17orf81,C17orf81,CTDNEP1	-601,-539,-360,-360,-360,-865
chr9:39819072-39820499	chr9	+	39819616	39819694	True	NR_003528,NM_001085452	chr9,chr9	-,+	LOC653501,FAM75A1	-355090,65280
chr9:39819072-39820499	chr9	-	65574623	65574701	False	NR_024496,NM_015667	chr9,chr9	+,-	LOC442421,FAM75A7	919567,-65013
chr9:39819072-39820499	chr9	+	39290371	39290449	False	NM_033655,NM_001085452	chr9,chr9	-,+	CNTNAP3,FAM75A1	-2071,65249
chr9:39819072-39820499	chr9	+	41435646	41435724	False	NM_015667	chr9	+	FAM75A7	64954
chr7:151718468-151718839	chr7	+	151718522	151718631	True	NM_022087,NM_016203	chr7,chr7	+,-	GALNT11,PRKAG2	4146,-144206
chr22:42590451-42591597	chr22	+	42590490	42591305	True	NM_005650,NR_036498	chr22,chr22	-,+	TCF20,LOC388906	20191,74453
chr12:54718534-54718800	chr12	+	54718579	54718826	True	NM_016057,NM_001136023	chr12,chr12	+,-	COPZ1,NFE2	84,-23788
chr19:18208707-18209142	chr19	+	18208924	18209184	True	NM_015016,NM_153701	chr19,chr19	+,-	MAST3,IL12RB1	-380,-11227
chr6:166797933-166799924	chr6	+	166798028	166799728	True	NM_016098,NR_027284	chr6,chr6	-,+	BRP44L,LOC441177	-1542,-397048
chr17:66238178-66239366	chr17	+	66238222	66238400	True	NM_001033571,NM_001033570,NM_001033572,NM_001033574,NM_001174166,NM_016627,NM_001033569	chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,-,+,+	AMZ2,AMZ2,AMZ2,AMZ2,SLC16A6,AMZ2,AMZ2	5744,5744,5744,5744,49055,5744,5744
chr17:66238178-66239366	chr17	-	62977689	62977747	False	NR_026903,NM_001165933	chr17,chr17	-,+	AMZ2P1,RGS9	-5986,155708
chrX:47063076-47063306	chrX	+	47063079	47063145	True	NM_003334,NR_024235,NR_024616	chrX,chrX,chrX	+,-,+	UBA1,NDUFB11,INE1	-9929,-58470,1101
chr18:72340662-72342217	chr18	+	72341009	72342060	True	NM_017757,NR_024484,NM_001146190,NM_001146189	chr18,chr18,chr18,chr18	+,-,+,+	ZNF407,LOC400657,ZNF407,ZNF407	858,-75938,858,858
chr16:22451977-22453745	chr16	+	22452344	22453289	True	NR_027154,NR_027460	chr16,chr16	+,-	LOC641298,RRN3P3	-4066,-3308
chr16:22451977-22453745	chr16	-	30341804	30341863	False	NR_002453,NM_013292	chr16,chr16	-,+	LOC595101,MYLPF	4891,44259
chr16:22451977-22453745	chr16	-	29601717	29602656	False	NR_002593,NM_001030288	chr16,chr16	-,+	SLC7A5P1,SPN	22432,71643
chr16:22451977-22453745	chr16	-	18933700	18933750	False	NM_015092,NM_024847	chr16,chr16	-,+	SMG1,TMC7	4026,61505
chr16:22451977-22453745	chr16	-	21940095	21941040	False	NM_173806,NM_003366	chr16,chr16	-,+	PDZD9,UQCRC2	71441,23568
chr16:22451977-22453745	chr16	-	21508593	21509538	False	NM_001077180,NR_027155	chr16,chr16	+,-	METTL9,LOC100271836	101317,4114
chr7:97736111-97736327	chr7	+	97736111	97736375	True	NM_006188,NM_014916	chr7,chr7	-,+	OCM2,LMTK2	-116695,-23
chr13:99175362-99176422	chr13	+	99175558	99176470	True	NM_003576,NR_036129	chr13,chr13	-,+	STK24,MIR3170	-1217,-314832
chr1:228674133-228674421	chr1	+	228674225	228674453	True	NM_001010858,NM_033445	chr1,chr1	+,-	RNF187,HIST3H2A	614,-28665
chrX:47367383-47368342	chrX	+	47367781	47368325	True	NM_001654,NM_153380	chrX,chrX	+,-	ARAF,ZNF41	52190,-25436
chr19:48965701-48966166	chr19	+	48965857	48966147	True	NM_013348,NM_017457,NM_004228,NM_001080434,NM_170720	chr19,chr19,chr19,chr19,chr19	+,+,+,-,+	KCNJ14,CYTH2,CYTH2,LMTK3,KCNJ14	-7142,6317,6317,50349,-1402
chr12:85671801-85672240	chr12	+	85671818	85672220	True	NM_001100917,NM_006982	chr12,chr12	-,+	TSPAN19,ALX1	-241763,1815
chr12:123258400-123258874	chr12	+	123258506	123258887	True	NM_032554,NM_201435,NM_032573,NR_027918	chr12,chr12,chr12,chr12	-,+,+,+	GPR81,CCDC62,CCDC62,CCDC62	-43377,185,185,185
chr12:114399515-114400042	chr12	+	114399553	114400079	True	NM_016196,NM_001146699,NM_001146698,NM_138432	chr12,chr12,chr12,chr12	-,-,-,+	RBM19,RBM19,RBM19,SDSL	4147,4147,4147,-539388
chr10:134601365-134601577	chr10	+	134601417	134601571	True	NM_005539,NM_177400	chr10,chr10	+,-	INPP5A,NKX6-2	-250115,-1880
chr9:84561392-84562523	chr9	+	84561496	84562552	True	NM_005077,NM_207416	chr9,chr9	-,+	TLE1,FAM75D3	-257900,-3140
chr9:84561392-84562523	chr9	+	84546404	84547281	False	NM_001145197,NM_005077	chr9,chr9	+,-	FAM75D4,TLE1	-3120,-242808
chr9:117085623-117086082	chr9	+	117085947	117086025	True	NM_000607,NM_000608,NM_030767	chr9,chr9,chr9	+,+,-	ORM1,ORM2,AKNA	-696,6043,70710
chr9:117085623-117086082	chr9	+	117092718	117092796	False	NM_000607,NM_000608,NM_030767	chr9,chr9,chr9	+,+,-	ORM1,ORM2,AKNA	-7467,-701,63939
chr4:42618890-42620452	chr4	+	42618912	42620468	True	NM_001080505,NM_001105529	chr4,chr4	+,-	SHISA3,ATP8A1	-219115,38704
chr1:16837762-16839277	chr1	+	16838025	16839045	True	NR_023386,NR_037446	chr1,chr1	-,+	CROCCP3,MIR3675	-18829,36363
chr16:3542911-3543524	chr16	+	3543292	3543518	True	NM_015041,NM_001080524	chr16,chr16	+,-	CLUAP1,C16orf90	7444,1953
chr1:26233195-26233457	chr1	+	26233266	26233506	True	NR_037481,NM_203401,NM_001145454,NM_005563,NM_001099626,NM_203399	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,+,-	MIR3917,STMN1,STMN1,STMN1,FAM54B,STMN1	-321,-622,-273,-273,-85998,84
chr6:35775302-35775883	chr6	+	35775331	35775833	True	NM_001832,NM_182548	chr6,chr6	-,+	CLPS,LHFPL5	-10229,-2313
chr22:36113952-36115730	chr22	+	36114065	36115637	True	NM_030642,NM_203377	chr22,chr22	+,-	APOL5,MB	-198,-94664
chr4:151936362-151936659	chr4	+	151936383	151936657	True	NM_006726,NM_001006,NM_001199282	chr4,chr4,chr4	-,+,-	LRBA,RPS3A,LRBA	42,84096,-11
chr1:31886564-31886827	chr1	+	31886618	31886808	True	NM_001199039,NM_001199038,NM_018565,NM_001199037,NM_178865,NM_004102	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-	SERINC2,SERINC2,SERINC2,SERINC2,SERINC2,FABP3	-9,-4257,-9,-3648,-706,-40695
chr12:27406744-27408732	chr12	+	27407030	27408724	True	NM_001080406,NM_015000	chr12,chr12	-,+	C12orf71,STK38L	-171575,-10004
chr22:30443210-30443765	chr22	+	30443214	30443720	True	NM_152510,NM_002309	chr22,chr22	+,-	HORMAD2,LIF	32732,199126
chr4:186726797-186727702	chr4	+	186726928	186727574	True	NM_001145670,NM_001145671,NM_001145672,NM_003603,NM_003265	chr4,chr4,chr4,chr4,chr4	-,-,-,-,+	SORBS2,SORBS2,SORBS2,SORBS2,TLR3	5886,4701,4524,5868,262734
chrY:13311772-13311978	chrY	+	13311866	13311974	True	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	1462323,1221465
chrY:13311772-13311978	chr21	+	9909583	9909691	False	NM_001033515,NR_037458	chr21,chr21	-,+	LOC100132288,MIR3687	58944,-83431
chr6:33590530-33591261	chr6	+	33590576	33591050	True	NR_027908,NM_002224	chr6,chr6	-,+	C6orf227,ITPR3	-29461,-1471
chr17:25797358-25797987	chr17	+	25797700	25797897	True	NM_014238,NM_000625	chr17,chr17	+,-	KSR1,NOS2	1138,329721
chr5:54530434-54530900	chr5	+	54530447	54530903	True	NM_021147,NM_001190787,NM_015360	chr5,chr5,chr5	-,-,+	CCNO,LOC345643,SKIV2L2	-939,-7304,72672
chr4:166030704-166031591	chr4	+	166030808	166031507	True	NM_001100389,NM_152620	chr4,chr4	-,+	TMEM192,TRIM60	2568,-77715
chr6:82797355-82798329	chr6	+	82797373	82798354	True	NM_006670,NM_015525	chr6,chr6	+,-	TPBG,IBTK	274568,159150
chr10:88414396-88414659	chr10	+	88414497	88414707	True	NM_033282,NM_015045,NM_001030015	chr10,chr10,chr10	+,-,+	OPN4,WAPAL,OPN4	-234,-132956,-234
chr2:27374360-27375027	chr2	+	27374909	27375013	True	NM_178553,NM_175769	chr2,chr2	-,+	C2orf53,TCF23	-12577,-3015
chr22:38968630-38970178	chr22	+	38968882	38970234	True	NM_001002880,NM_007068	chr22,chr22	+,-	CBY1,DMC1	82423,-2693
chr9:33401549-33401982	chr9	+	33401623	33402029	True	NM_001170,NM_002504	chr9,chr9	-,+	AQP7,NFX1	538,-111256
chr11:72354837-72355602	chr11	+	72355057	72355646	True	NM_033388,NR_026572,NM_001143839	chr11,chr11,chr11	+,-,-	ATG16L2,PDE2A,PDE2A	169804,-1570,-1553
chr2:228335114-228336226	chr2	+	228335296	228336254	True	NM_024795,NM_001135187,NM_001135189,NM_001135188,NM_004504	chr2,chr2,chr2,chr2,chr2	-,+,+,+,+	TM4SF20,AGFG1,AGFG1,AGFG1,AGFG1	-91274,633,633,633,633
chr3:42848689-42850576	chr3	+	42848834	42850100	True	NM_001296,NM_001099669,NM_001099668,NM_014056	chr3,chr3,chr3,chr3	+,-,-,-	CCBP2,HIGD1A,HIGD1A,HIGD1A	863,-2807,-2900,-2807
chr8:1709907-1710508	chr8	+	1709943	1710201	True	NR_033895,NM_018941	chr8,chr8	-,+	LOC286083,CLN8	-459116,1668
chr9:69150703-69152095	chr2	-	114295331	114296189	False	NR_026821,NM_012184,NR_024005	chr2,chr2,chr2	+,+,-	FAM138B,FOXD4L1,DDX11L2	38769,-38721,63020
chr9:69150703-69152095	chr9	+	69151055	69151913	True	NR_002836,NM_001098805	chr9,chr9	-,+	PGM5P2,ANKRD20A4	-3201,230067
chr9:69150703-69152095	chr9	+	76735	77591	False	NR_026822,NM_203447,NM_207305	chr9,chr9,chr9	-,+,-	FAM138C,DOCK8,FOXD4	-40871,137273,40876
chr12:56725794-56727792	chr12	+	56725995	56727697	True	NM_001127460,NM_014871,NM_001166279,NM_016584	chr12,chr12,chr12,chr12	-,-,-,+	PAN2,PAN2,PAN2,IL23A	-4,190,190,4965
chr12:321549-322049	chr12	+	321575	321916	True	NM_001122848,NM_015232,NM_003044,NM_001122847	chr12,chr12,chr12,chr12	-,+,-,-	SLC6A12,IQSEC3,SLC6A12,SLC6A12	1506,-135084,627,969
chr5:141390017-141391404	chr5	+	141390017	141391333	True	NM_005471,NM_183401	chr5,chr5	-,+	GNPDA1,RNF14	1337,-41359
chr11:8061264-8061491	chr11	+	8061387	8061505	True	NM_003320,NM_176821	chr11,chr11	+,-	TUB,NLRP10	-1258,-76328
chr2:110371570-110371774	chr2	+	110371587	110371821	True	NM_023016,NM_178584,NM_144710	chr2,chr2,chr2	+,-,-	ANKRD57,SEPT10,SEPT10	89,12,12
chr11:123515822-123516220	chr11	+	123515824	123516188	True	NM_020716,NM_001040151,NM_018400	chr11,chr11,chr11	+,-,-	GRAMD1B,SCN3B,SCN3B	-119347,9177,9177
chr16:8623270-8624140	chr16	+	8623482	8624174	True	NM_001146336,NM_024109	chr16,chr16	-,+	TMEM114,METTL22	-1256,91352
chr1:45787535-45788861	chr1	+	45787944	45788520	True	NM_001048174,NM_032756	chr1,chr1	-,+	MUTYH,HPDL	17159,4024
chr16:30934644-30934947	chr16	+	30934712	30934780	True	NM_001099784,NR_024348	chr16,chr16	+,-	FBXL19,FBXL19-AS1	1115,-122
chr7:56372569-56373573	chr7	+	56372905	56373439	True	NR_029420,NR_026929	chr7,chr7	-,+	LOC650226,DKFZp434L192	142679,190476
chr7:56372569-56373573	chr14	+	63863404	63863716	False	NM_145171,NM_020663	chr14,chr14	-,+	GPHB5,RHOJ	-78841,-192572
chr16:767290-767659	chr16	+	767430	767636	True	NM_001031737,NM_024042,NM_032304,NM_023933	chr16,chr16,chr16,chr16	-,+,+,+	CCDC78,METRN,HAGHL,FAM173A	8887,-2308,9629,3521
chr1:161043085-161043375	chr1	+	161043191	161043373	True	NR_033385,NM_001025598,NM_181720	chr1,chr1,chr1	+,-,-	KLHDC9,ARHGAP30,ARHGAP30	24777,-3431,-3431
chr16:11678783-11680007	chr16	+	11679103	11679785	True	NM_003498,NM_001136473,NR_024320,NM_001136472,NM_004862	chr16,chr16,chr16,chr16,chr16	+,-,-,-,-	SNN,LITAF,LITAF,LITAF,LITAF	82503,1071,1587,1071,494
chr19:38793544-38793818	chr19	+	38793559	38793691	True	NM_033557,NM_033520	chr19,chr19	-,+	YIF1B,C19orf33	6868,1112
chr11:74475432-74476565	chr11	+	74475705	74476418	True	NM_015424,NM_001098638	chr11,chr11	-,+	CHRDL2,RNF169	-33519,-15853
chr7:38669415-38669645	chr7	+	38669485	38669693	True	NM_001635,NM_139316,NM_001166018	chr7,chr7,chr7	-,-,+	AMPH,AMPH,POU6F2	1524,1524,347915
chr17:79375339-79375584	chr17	+	79375356	79375632	True	NM_001080519,NR_036152	chr17,chr17	+,-	BAHCC1,MIR3186	-1867,42632
chr20:61435377-61435685	chr20	+	61435409	61435571	True	NM_007346,NM_018270,NM_006602	chr20,chr20,chr20	+,+,-	OGFR,C20orf20,TCFL5	605,-7655,57594
chr14:20112997-20114427	chr22	+	16381943	16382009	False	NM_001005239,NR_001591	chr22,chr22	-,+	OR11H1,psiTPTE22	67845,700791
chr14:20112997-20114427	chr2	+	130715255	130715315	True	NR_036537,NM_032144	chr2,chr2	-,+	LOC100131320,RAB6C	22790,21919
chr14:20112997-20114427	chr14	+	20113908	20114369	False	NM_001197287,NM_172194	chr14,chr14	-,+	OR11H2,OR4Q3	68172,101217
chr2:97173497-97173999	chr2	+	97173500	97173844	True	NM_212481,NR_026875	chr2,chr2	+,-	ARID5A,NEURL3	28619,52
chr9:37782606-37784212	chr9	+	37782888	37784246	True	NM_016042,NM_001002269,NM_024345	chr9,chr9,chr9	-,-,+	EXOSC3,EXOSC3,DCAF10	869,871,16543
chr16:55538723-55539402	chr16	+	55539116	55539344	True	NM_001025194,NM_017839	chr16,chr16	-,+	CES1,LPCAT2	327781,3568
chr7:104565094-104566029	chr7	+	104565643	104565872	True	NM_018682,NR_027374	chr7,chr7	+,-	MLL5,LOC723809	88764,1279
chr22:29785597-29785828	chr22	+	29785700	29785772	True	NM_001127,NM_145730,NM_001166019,NM_021026	chr22,chr22,chr22,chr22	-,-,-,+	AP1B1,AP1B1,AP1B1,RFPL1	-1128,-1128,-1128,48799
chr11:130188927-130189152	chr11	+	130188929	130189021	True	NM_014155,NM_139055	chr11,chr11	-,+	ZBTB44,ADAMTS15	-4322,129847
chr6:56405940-56407493	chr6	+	56405972	56407314	True	NM_152731,NM_015548	chr6,chr6	+,-	BEND6,DST	412458,100430
chr22:30662376-30662665	chr22	+	30662403	30662619	True	NM_020530,NM_001017437	chr22,chr22	-,+	OSM,CCDC157	260,90007
chr3:88038425-88040051	chr3	+	88038488	88040060	True	NM_001008390,NM_000866	chr3,chr3	-,+	CGGBP1,HTR1F	68136,-6820
chr1:1852371-1852602	chr1	+	1852413	1852643	True	NM_138705,NM_178545	chr1,chr1	+,-	CALML6,TMEM52	-6198,-1673
chr3:8772369-8774324	chr3	+	8772684	8774262	True	NM_033337,NM_000916,NM_001234	chr3,chr3,chr3	+,-,+	CAV3,OXTR,CAV3	1223,37096,1233
chr3:9942307-9943846	chr3	+	9942943	9943863	True	NM_001193380,NM_153480,NM_001199552,NM_153483	chr3,chr3,chr3,chr3	+,+,-,+	IL17RE,IL17RE,CIDEC,IL17RE	648,648,-21005,432
chr17:43566359-43566981	chr17_ctg5_hap1	+	181474	181918	False	NM_014798,NR_027774,NR_027782,NM_001113738	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	-,-,-,+	PLEKHM1,PLEKHM1,PLEKHM1,ARL17A	1346,1346,1346,13802
chr17:43566359-43566981	chr17	+	43566406	43566966	True	NR_037772,NM_014798,NR_027774,NR_027782	chr17,chr17,chr17,chr17	+,-,-,-	CRHR1,PLEKHM1,PLEKHM1,PLEKHM1	130743,1230,1230,1230
chr17:43566359-43566981	chr17	+	62831955	62832005	False	NR_024386,NM_001165933	chr17,chr17	-,+	PLEKHM1P,RGS9	1347,301450
chr17:73128719-73128990	chr17	+	73128733	73128822	True	NM_014595,NM_024585	chr17,chr17	-,+	NT5C,ARMC7	-856,-22702
chr11:102188432-102189044	chr11	+	102188486	102189060	True	NM_001165,NM_052932,NM_182962	chr11,chr11,chr11	+,-,+	BIRC3,TMEM123,BIRC3	-343,134765,-343
chr1:41446095-41446393	chr1	+	41446127	41446425	True	NM_001905,NM_001168247	chr1,chr1	+,-	CTPS,SLFNL1	-1171,41022
chr7:150779087-150779361	chr7	+	150779143	150779345	True	NM_031434,NM_031946,NM_001042535,NM_001136044,NM_033015,NM_006712	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,-,-,-	TMUB1,AGAP3,AGAP3,TMUB1,FASTK,FASTK	1118,4480,4480,1325,-1192,-1192
chr3:10210187-10210676	chr3	+	10210205	10210621	True	NM_001570,NM_001164839	chr3,chr3	+,-	IRAK2,C3orf24	-3693,-60290
chr9:130478985-130480065	chr9	+	130479093	130480021	True	NM_001002913,NM_144965,NM_001012502	chr9,chr9,chr9	-,+,+	PTRH1,TTC16,C9orf117	-1157,-786,-9873
chr12:3000225-3000500	chr12	+	3000334	3000438	True	NM_202003,NM_001160408,NM_003324	chr12,chr12,chr12	-,+,+	FOXM1,TULP3,TULP3	-14031,-352,-352
chr11:111808343-111808881	chr11	+	111808412	111808842	True	NM_001885,NM_001037954	chr11,chr11	-,+	CRYAB,DIXDC1	-25939,-536
chr8:27935313-27936778	chr8	+	27935340	27936756	True	NM_018091,NM_001010906	chr8,chr8	+,-	ELP3,C8orf80	13827,4682
chr1:229409368-229411166	chr1	+	229409545	229410955	True	NM_145257,NM_004578	chr1,chr1	-,+	C1orf96,RAB4A	67784,-2717
chr3:69828981-69829425	chr3	+	69829027	69829449	True	NM_015123,NM_006722	chr3,chr3	-,+	FRMD4B,MITF	-393597,-16116
chr20:30311824-30312160	chr20	+	30311921	30312167	True	NM_012112,NM_138578,NM_001191	chr20,chr20,chr20	+,-,-	TPX2,BCL2L1,BCL2L1	14736,-1265,-1265
chr1:92730695-92730966	chr1	+	92730694	92731016	True	NM_053274,NM_024813	chr1,chr1	-,+	GLMN,RPAP2	33608,33505
chr6:52527599-52529226	chr6	+	52527785	52529109	True	NM_014051,NR_024405,NR_033760,NR_024403	chr6,chr6,chr6,chr6	+,+,-,+	TMEM14A,LOC730101,GSTA7P,LOC730101	6774,89,80898,89
chr8:145741151-145741401	chr8	+	145741157	145741399	True	NM_138431,NM_014665,NM_004260	chr8,chr8,chr8	+,+,-	MFSD3,LRRC14,RECQL4	-6656,1963,1861
chr14:102022693-102023032	chr14	+	102022828	102022960	True	NR_002770,NR_031649,NM_001362	chr14,chr14,chr14	-,-,+	DIO3OS,MIR1247,DIO3	-815,3849,4727
chr20:33870571-33870810	chr20	+	33870726	33870812	True	NM_006690,NM_002212,NM_181466,NM_181468,NM_178468	chr20,chr20,chr20,chr20,chr20	+,-,-,-,-	MMP24,EIF6,EIF6,EIF6,FAM83C	-56245,1832,1832,1744,9463
chr6:167652846-167653641	chr6	+	167652850	167653560	True	NM_005299,NM_001143947	chr6,chr6	-,+	GPR31,UNC93A	-81531,51242
chr1:2034750-2036220	chr1	+	2034761	2035831	True	NR_024445,NM_001033582	chr1,chr1	-,+	LOC100128003,PRKCZ	89243,323
chr5:10664083-10665120	chr5	+	10664162	10665116	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-99778,96321
chr16:18808421-18809330	chr16	+	18808741	18809373	True	NM_001030009,NM_001019,NM_015161,NM_024847	chr16,chr16,chr16,chr16	-,-,-,+	RPS15A,RPS15A,ARL6IP1,TMC7	-7085,-7085,3542,185882
chr7:138459062-138460594	chr7	+	138459572	138460230	True	NM_130841,NM_001085429	chr7,chr7	-,+	ATP6V0A4,TMEM213	-790,22508
chr5:139028906-139029113	chr5	+	139029019	139029127	True	NM_016463,NM_198282	chr5,chr5	+,-	CXXC5,TMEM173	-769,-166676
chr7:63953683-63955036	chr7	+	63954273	63954835	True	NM_178558,NR_029404	chr7,chr7	-,+	ZNF680,LOC649395	68727,-60271
chr4:100484667-100484966	chr4	+	100484667	100484943	True	NM_001134666,NM_001134665,NM_152292,NM_000253	chr4,chr4,chr4,chr4	-,-,-,+	RG9MTD2,RG9MTD2,RG9MTD2,MTTP	296,296,4,296
chr14:23769463-23770148	chr14	+	23769533	23770127	True	NM_001199864,NM_001199839,NM_004050,NR_026862	chr14,chr14,chr14,chr14	+,+,+,-	BCL2L2-PABPN1,BCL2L2,BCL2L2,PPP1R3E	5843,5941,5843,1980
chr9:140172184-140172420	chr9	+	140172386	140172468	True	NM_017723,NM_001004354	chr9,chr9	+,-	C9orf167,NRARP	-157,24285
chr14:102824872-102825429	chr14	+	102825128	102825239	True	NM_001177612,NM_001177611,NM_032630,NM_014844,NM_001172631	chr14,chr14,chr14,chr14,chr14	-,-,-,+,+	CINP,CINP,CINP,TECPR2,TECPR2	4077,3875,4077,4060,4060
chr14:69620515-69621753	chr14	+	69620608	69621708	True	NM_003861,NM_001193360	chr14,chr14	-,+	DCAF5,EXD2	-694,36485
chr17:18088336-18088663	chr17	+	18088428	18088688	True	NM_002018,NM_017758	chr17,chr17	-,+	FLII,ALKBH5	73421,-1612
chr5:179286829-179287189	chr5	+	179286846	179287211	True	NM_003900,NM_001017987,NM_016175	chr5,chr5,chr5	+,-,-	SQSTM1,C5orf45,C5orf45	-39055,-1006,-1006
chr18:24129440-24129675	chr18	+	24129587	24129705	True	NM_001136205,NR_026908,NM_001142730	chr18,chr18,chr18	-,+,-	KCTD1,C18orf16,KCTD1	-188,315566,-1087
chr7:63959144-63959989	chr7	+	63959350	63959857	True	NM_178558,NR_029404	chr7,chr7	-,+	ZNF680,LOC649395	63705,-65335
chr6:8099952-8100782	chr6	+	8100084	8100806	True	NM_001135650,NR_027712,NR_037618,NM_004280	chr6,chr6,chr6,chr6	-,+,-,-	EEF1E1,PIP5K1P1,EEF1E1-MUTED,EEF1E1	2072,-113812,2072,2072
chr16:24861072-24861496	chr16	+	24861087	24861207	True	NM_001006634,NM_052944	chr16,chr16	-,+	ARHGAP17,SLC5A11	165518,-3586
chr5:99400905-99401723	chr5	+	99401539	99401771	True	NM_198507,NR_027503	chr5,chr5	+,-	FAM174A,LOC100133050	469352,322237
chr5:99400905-99401723	chr5	+	99715045	99715095	False	NM_198507,NR_027503	chr5,chr5	+,-	FAM174A,LOC100133050	156028,8913
chr5:149323936-149324149	chr5	+	149323967	149324191	True	NM_000440,NM_000112	chr5,chr5	-,+	PDE6A,SLC26A2	215,16108
chr17:37840987-37842802	chr17	+	37841140	37842285	True	NM_001005862,NM_033419	chr17,chr17	+,-	ERBB2,PGAP3	2107,2075
chr11:35532023-35533374	chr11	+	35532129	35533371	True	NM_014344,NM_001001991	chr11,chr11	+,-	FJX1,PAMR1	106363,13855
chr5:103425530-103426026	chr5	+	103425534	103426033	True	NM_033211,NM_031438	chr5,chr5	+,-	C5orf30,NUDT12	-831144,-527044
chr1:165414256-165414509	chr1	+	165414287	165414505	True	NM_006917,NR_033824,NM_001005214	chr1,chr1,chr1	-,-,+	RXRG,RXRG,LRRC52	137,137,98972
chr11:62852185-62853513	chr11	+	62852262	62853410	True	NR_037193,NM_001136506,NM_001039752	chr11,chr11,chr11	+,-,+	SLC3A2,SLC22A24,SLC22A10	-203144,58334,204019
chr7:48128149-48128356	chr7	+	48128149	48128387	True	NM_181597,NM_003364,NM_152782	chr7,chr7,chr7	+,+,-	UPP1,UPP1,SUN3	5,358,-59433
chr2:219133183-219133512	chr2	+	219133352	219133421	True	NM_015488,NM_001077191,NM_001087,NM_170699,NM_001077194,NM_001077399	chr2,chr2,chr2,chr2,chr2,chr2	+,+,-,+,+,+	PNKD,GPBAR1,AAMP,GPBAR1,GPBAR1,PNKD	1693,-7669,1523,-7669,-7669,1693
chr7:142555079-142556286	chr7	+	142555183	142555997	True	NM_004445,NM_018646	chr7,chr7	+,-	EPHB6,TRPV6	-2450,27530
chr17:7144753-7145558	chr17	+	7144753	7145597	True	NM_015343,NM_007278,NM_004422,NM_203415,NM_203414,NM_203413,NM_015362,NM_001143775,NM_024297	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,+,+,+,+,-,-	CTDNEP1,GABARAP,DVL2,C17orf81,C17orf81,C17orf81,C17orf81,CTDNEP1,PHF23	9712,206,-6890,9774,9953,9953,9953,9448,-1928
chr2:232378128-232379220	chr2	+	232378359	232379133	True	NR_024079,NM_152614	chr2,chr2	-,+	C2orf52,C2orf57	-33,78441
chr7:75446579-75446911	chr7	+	75446614	75446815	True	NM_002991,NM_001040456	chr7,chr7	-,+	CCL24,RHBDD2	-3581,61501
chr10:32749488-32750790	chr10	+	32749524	32750529	True	NM_025209,NM_145023	chr10,chr10	-,+	EPC1,CCDC7	-113411,-14541
chr6:112372598-112373689	chr6	+	112372599	112372693	True	NM_016262,NM_198239,NM_003880	chr6,chr6,chr6	-,+,+	TUBE1,WISP3,WISP3	36116,2677,2584
chr9:124060773-124061530	chr9	+	124060842	124061427	True	NM_004099,NM_000177	chr9,chr9	-,+	STOM,GSN	71177,651
chr3:183819018-183820254	chr3	+	183819022	183819983	True	NM_182589,NM_001023587	chr3,chr3	+,-	HTR3E,ABCC5	-1114,-83295
chr6:13969556-13971258	chr6	+	13969653	13971241	True	NM_001031713,NM_001165033	chr6,chr6	-,+	CCDC90A,RNF182	-154864,-44281
chr18:44557574-44558398	chr18	+	44557636	44558399	True	NM_145653,NM_001100817,NM_016427,NM_031303	chr18,chr18,chr18,chr18	-,-,-,+	TCEB3C,TCEB3CL,TCEB3B,KATNAL2	-1187,-1423,3640,-30900
chr13:113760311-113761137	chr13	+	113760321	113760474	True	NM_001127202,NM_019616,NM_000131	chr13,chr13,chr13	-,+,+	PCID2,F7,F7	102606,-267,-267
chr12:128046122-128046697	chr12	+	128046126	128046387	True	NR_033970,NR_033987	chr12,chr12	-,+	LOC440117,FLJ37505	-686890,319774
chr17:73662225-73662586	chr17	+	73662381	73662615	True	NM_001003716,NM_004259,NM_001003715,NM_013260	chr17,chr17,chr17,chr17	-,-,-,+	RECQL5,RECQL5,RECQL5,SAP30BP	704,700,704,783
chr1:159034414-159035107	chr1	+	159034585	159034995	True	NM_004833,NM_005531	chr1,chr1	-,+	AIM2,IFI16	11702,-54961
chr11:64685649-64686096	chr11	+	64685656	64685836	True	NM_015104,NM_006244	chr11,chr11	-,+	ATG2A,PPP2R5B	-934,6306
chr16:2930653-2931362	chr16	+	2930821	2931122	True	NM_001142499,NM_138439,NM_022119,NM_001142500	chr16,chr16,chr16,chr16	+,+,-,+	FLYWCH2,FLYWCH2,PRSS22,FLYWCH2	2073,2073,-22650,2073
chr11:94036120-94036728	chr11	+	94036239	94036765	True	NM_001199206,NM_016540	chr11,chr11	+,-	FOLR4,GPR83	2037,97870
chr11:93980890-93981977	chr11	+	93980999	93981597	True	NM_001199206,NM_016540	chr11,chr11	+,-	FOLR4,GPR83	57205,153038
chr16:101348-101875	chr16	+	101352	101748	True	NM_016310,NM_024571	chr16,chr16	-,+	POLR3K,SNRNP25	1934,2080
chr9:140140036-140140296	chr9	+	140140267	140140339	True	NM_001004353,NM_006088,NM_001001710,NM_015456	chr9,chr9,chr9,chr9	+,+,-,+	C9orf173,TUBB2C,FAM166A,COBRA1	5390,-4607,1933,9419
chr14:20145986-20146671	chr22	+	16413734	16413880	False	NM_001005239,NR_001591	chr22,chr22	-,+	OR11H1,psiTPTE22	35984,668920
chr14:20145986-20146671	chr14	+	20146043	20146551	True	NM_001197287,NM_172194	chr14,chr14	-,+	OR11H2,OR4Q3	35990,69035
chr14:20145986-20146671	chr14	-	19413143	19413657	False	NM_001145442,NM_001013354	chr14,chr14	-,+	POTEM,OR11H12	606667,-35606
chr1:22378235-22378486	chr1	+	22378390	22378484	True	NM_001039802,NM_030761,NM_044472,NM_001791	chr1,chr1,chr1,chr1	+,-,+,+	CDC42,WNT4,CDC42,CDC42	635,91085,635,635
chr22:32810659-32811272	chr22	+	32810784	32811260	True	NM_014306,NM_001098535	chr22,chr22	-,+	C22orf28,RFPL3	-2510,-56981
chr9:123605227-123605451	chr9	+	123605295	123605455	True	NM_005047,NR_024408	chr9,chr9	-,+	PSMD5,LOC253039	-89,-26
chr14:77856571-77858116	chr14	+	77856717	77858123	True	NM_001010860,NM_213601	chr14,chr14	+,-	SAMD15,TMED8	-13013,-13321
chr1:247239717-247241691	chr1	+	247239878	247241490	True	NM_173858,NR_037894,NM_001204220,NM_033213	chr1,chr1,chr1,chr1	+,-,-,-	VN1R5,ZNF670-ZNF695,ZNF670,ZNF670	177883,675,675,675
chr19:52585029-52586255	chr19	+	52585149	52585909	True	NM_014225,NM_001136499	chr19,chr19	+,-	PPP2R1A,ZNF841	107145,13159
chr9:19379395-19379890	chr9	+	19379412	19379783	True	NM_001010,NM_001010887	chr9,chr9	-,+	RPS6,ACER2	504,29141
chr3:138074695-138076131	chr3	+	138074885	138075973	True	NM_012219,NM_001085049,NM_178130	chr3,chr3,chr3	+,+,-	MRAS,MRAS,TXNDC6	-8311,-7428,-26157
chr18:20733620-20734234	chr18	+	20734102	20734276	True	NM_138375,NM_032933	chr18,chr18	+,-	CABLES1,C18orf45	1512,283699
chr16:67976863-67977108	chr16	+	67976934	67977098	True	NM_006742,NM_002801,NM_000229	chr16,chr16,chr16	+,-,-	PSKH1,PSMB10,LCAT	-49810,-6154,967
chr14:39853873-39854939	chr14	+	39853928	39854950	True	NM_203355,NM_203301	chr14,chr14	+,-	CTAGE5,FBXO33	-117651,46804
chrX:27760608-27761326	chrX	+	27760741	27761033	True	NM_001136533,NM_001017930	chrX,chrX	+,-	DCAF8L2,DCAF8L1	3892,238583
chr5:140812531-140812882	chr5	+	140812579	140812759	True	NM_005642,NR_001297,NM_032094,NM_003735	chr5,chr5,chr5,chr5	-,+,+,+	TAF7,PCDHGB8P,PCDHGA12,PCDHGA12	-112228,-6777,-2472,-2472
chr12:3603348-3604602	chr12	+	3603424	3604489	True	NM_019854,NM_001144958	chr12,chr12	+,-	PRMT8,EFCAB4B	-3050,257928
chr16:69983328-69984383	chr16	+	69983348	69984324	True	NM_001136214,NR_003610,NM_182619	chr16,chr16,chr16	+,-,+	CLEC18A,PDXDC2P,CLEC18A	301,115577,485
chr16:69983328-69984383	chr16	-	74456512	74457110	False	NM_001011880,NM_002811	chr16,chr16	-,+	CLEC18B,PSMD7	-1144,-125890
chr16:69983328-69984383	chr16	+	70206260	70207176	False	NR_033959,NM_173619	chr16,chr16	-,+	LOC729513,CLEC18C	52810,751
chr19:35760421-35760647	chr19	+	35760524	35760606	True	NM_003367,NM_207291,NM_152481	chr19,chr19,chr19	+,+,-	USF2,USF2,FAM187B	-679,-679,-40896
chr17:45340316-45341148	chr17	+	45340331	45340757	True	NM_000212,NM_001256	chr17,chr17	+,-	ITGB3,CDC27	-9174,-73666
chr17:66257210-66258332	chr17	+	66257227	66258003	True	NM_014960,NM_001174166	chr17,chr17	+,-	ARSG,SLC16A6	-1955,29454
chr6:116847762-116848396	chr6	+	116847767	116848383	True	NM_001139444,NM_153036	chr6,chr6	-,+	BET3L,FAM26D	18445,1811
chr2:108605172-108606017	chr2	+	108605338	108606001	True	NR_024439,NM_021815	chr2,chr2	-,+	LOC729121,SLC5A7	-162755,-2408
chr14:94981310-94981650	chr14	+	94981314	94981650	True	NM_173850,NM_006215	chr14,chr14	-,+	SERPINA12,SERPINA4	2581,46132
chr14:105489697-105490817	chr14	+	105490129	105490679	True	NM_017955,NM_174891,NM_145701	chr14,chr14,chr14	-,+,-	CDCA4,C14orf79,CDCA4	-2704,-37571,-2704
chr7:27087841-27088307	chr7	+	27087913	27088323	True	NM_005522,NR_002795	chr7,chr7	-,+	HOXA1,HOXA11-AS1	47352,136703
chr3:9993103-9993762	chr3	+	9993150	9993658	True	NM_207351,NM_001077415	chr3,chr3	-,+	PRRT3,CRELD1	470,-17676
chr19:49109227-49109885	chr19	+	49109229	49109861	True	NM_017708,NM_133498	chr19,chr19	-,+	FAM83E,SPACA4	6883,138
chr8:24771347-24771568	chr8	+	24771347	24771617	True	NM_005382,NM_006158,NM_001105541	chr8,chr8,chr8	+,-,+	NEFM,NEFL,NEFM	-124,42564,837
chr16:31044159-31044505	chr16	+	31044257	31044391	True	NM_004604,NM_052874	chr16,chr16	+,-	STX4,STX1B	511,-22428
chr7:5226036-5226582	chr7	+	5226413	5226497	True	NM_016003,NM_015610,NR_034163,NM_001033519,NM_001033518	chr7,chr7,chr7,chr7,chr7	+,+,-,+,+	WIPI2,WIPI2,ZNF890P,WIPI2,WIPI2	3337,3337,-42236,3337,3337
chr11:17564694-17565193	chr11	+	17564726	17565126	True	NM_153676,NM_002478,NM_005709	chr11,chr11,chr11	-,+,-	USH1C,MYOD1,USH1C	887,175983,887
chr3:186544746-186545010	chr3	+	186544827	186545033	True	NM_181573,NM_001177800	chr3,chr3	-,+	RFC4,ADIPOQ	-20343,15429
chr17:32903942-32905727	chr17	+	32903979	32905717	True	NM_207454,NM_207313	chr17,chr17	-,+	C17orf102,TMEM132E	721,2050
chr12:13235635-13235936	chr12	+	13235634	13235974	True	NM_031289,NM_020853	chr12,chr12	-,+	GSG1,KIAA1467	12785,-38370
chr4:13549787-13551243	chr4	+	13549917	13551092	True	NR_015450,NM_001189,NR_003132	chr4,chr4,chr4	-,-,+	LOC285548,NKX3-2,HSP90AB2P	-469,-3803,-214932
chr9:117351442-117351890	chr9	+	117351464	117351918	True	NM_015404,NM_004888	chr9,chr9	-,+	DFNB31,ATP6V1G1	-83728,-1521
chr7:140867910-140868492	chr7	+	140867941	140868201	True	NM_053035,NM_001195278	chr7,chr7	-,+	MRPS33,LOC100131199	-153160,-93960
chr6:28218034-28219343	chr6	+	28218226	28219236	True	NM_001007531,NM_019110	chr6,chr6	+,-	NKAPL,ZKSCAN4	7861,816
chr22:25418109-25418892	chr22	+	25418181	25418880	True	NM_001001663,NM_001145206	chr22,chr22	-,+	TMEM211,KIAA1671	-82867,5060
chr5:180632670-180632946	chr5	+	180632894	180632990	True	NM_203295,NM_203294,NM_203297,NM_203296,NM_033342,NM_203293,NM_033549	chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,-,-,+	TRIM7,TRIM7,TRIM7,TRIM7,TRIM7,TRIM7,TRIM41	-1554,-1554,-4964,-1554,-717,-717,17315
chr2:54087232-54088659	chr2	+	54087478	54088669	True	NM_001164165,NM_006794,NM_015701	chr2,chr2,chr2	-,-,+	GPR75-ASB3,GPR75,ERLEC1	-308,-308,-73463
chr19:3506639-3506862	chr19	+	3506639	3506805	True	NM_031304,NM_016263,NM_001145165	chr19,chr19,chr19	-,+,-	DOHH,FZR1,DOHH	-6018,-395,-5701
chr14:31344608-31344877	chr14	+	31344741	31344899	True	NM_004086,NM_001135058,NR_030354	chr14,chr14,chr14	+,+,-	COCH,COCH,MIR624	-1051,-1051,139099
chr2:175227001-175227333	chr2	+	175227151	175227229	True	NM_001145250,NM_004882	chr2,chr2	+,-	SP9,CIR1	-27386,33270
chr18:6358196-6359366	chr18	+	6358196	6359082	True	NR_036205,NM_001010000	chr18,chr18	-,+	MIR4317,ARHGAP28	15392,475349
chr5:68676001-68677162	chr5	+	68676114	68676581	True	NM_133339,NM_002873,NM_133341,NM_133340,NM_001015892	chr5,chr5,chr5,chr5,chr5	+,+,+,+,-	RAD17,RAD17,RAD17,RAD17,TAF9	-8897,-9646,-9316,-9316,-10274
chr19:4301885-4302369	chr19	+	4301886	4302242	True	NM_001169126,NM_024333,NM_144615	chr19,chr19,chr19	-,+,-	TMIGD2,FSD1,TMIGD2	236,2348,236
chr4:128887962-128889096	chr4	+	128888094	128889073	True	NM_001039717,NM_152778	chr4,chr4	+,-	C4orf29,MFSD8	-1697,-955
chr1:24310392-24312046	chr1	+	24310730	24311851	True	NM_006625,NR_034035,NM_054016,NM_017761,NM_001191009,NM_001191006,NM_001191007,NM_001191005	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,-,-,-	SRSF10,SRSF10,SRSF10,PNRC2,SRSF10,SRSF10,SRSF10,SRSF10	-3777,-3777,-3777,-24492,-3777,-3777,-3777,-3777
chrX:48217202-48217764	chrX	+	48217334	48217394	True	NM_175711,NM_021014,NM_001034832	chrX,chrX,chrX	-,-,+	SSX3,SSX3,SSX4B	-1192,-1192,25573
chr7:32979884-32980386	chr7	+	32979985	32980388	True	NM_007270,NR_003500	chr7,chr7	+,-	FKBP9,RP9P	16616,2444
chr19:56113561-56113826	chr19	+	56113711	56113781	True	NM_153219,NM_032836	chr19,chr19	+,-	ZNF524,FIZ1	-2032,-2818
chr7:99910421-99911814	chr7	+	99910399	99911842	True	NM_001004351,NR_003613	chr7,chr7	+,-	SPDYE3,PMS2P1	-5125,22138
chr7:99910421-99911814	chr7	+	99912186	99912236	False	NM_001004351,NR_003613	chr7,chr7	+,-	SPDYE3,PMS2P1	-6912,21744
chr7:99910421-99911814	chr7	+	99906628	99909454	False	NM_001004351,NR_003613	chr7,chr7	+,-	SPDYE3,PMS2P1	-1354,24526
chr1:47338999-47340137	chr1	+	47339179	47339791	True	NM_001099772,NR_002788	chr1,chr1	+,-	CYP4B1,CYP4Z2P	-74560,26416
chr1:47338999-47340137	chr1	-	47559858	47559915	False	NM_005764,NM_178134	chr1,chr1	-,+	PDZK1IP1,CYP4Z1	95913,-26756
chr20:4701496-4701923	chr20	+	4701513	4701785	True	NR_024267,NM_012409	chr20,chr20	-,+	PRNT,PRND	19579,770
chr11:47374185-47374765	chr11	+	47374196	47374756	True	NM_000256,NM_001128225	chr11,chr11	-,+	MYBPC3,SLC39A13	57,55289
chr10:75501539-75502375	chr10	+	75501553	75501902	True	NM_198597,NR_026592,NM_004922	chr10,chr10,chr10	+,-,+	SEC24C,BMS1P4,SEC24C	2228,-11281,2228
chr4:122722750-122724228	chr4	+	122722788	122724243	True	NM_005033,NM_001237,NM_001034194	chr4,chr4,chr4	+,-,+	EXOSC9,CCNA2,EXOSC9	-367,20905,-367
chr2:233352971-233353593	chr2	+	233353004	233353632	True	NM_001195129,NM_004826	chr2,chr2	+,-	PRSS56,ECEL1	31540,-472
chr5:50680445-50680785	chr5	+	50680450	50680709	True	NM_198449,NM_002202	chr5,chr5	-,+	EMB,ISL1	-943216,-1545
chr19:39524204-39525059	chr19	+	39524213	39525036	True	NM_178820,NM_001004318	chr19,chr19	-,+	FBXO27,PAPL	-1015,49908
chr1:180999079-181000613	chr1	+	180999254	180999979	True	NM_005819,NM_001531,NM_001195000,NM_001195035,NM_001194999	chr1,chr1,chr1,chr1,chr1	-,+,+,+,+	STX6,MR1,MR1,MR1,MR1	-7208,2581,2581,2581,2581
chr19:17984848-17985071	chr19	+	17984908	17985020	True	NM_000215,NM_000453	chr19,chr19	-,+	JAK3,SLC5A5	-26067,-2177
chr1:143735963-143736998	chr1	+	143736462	143737012	True	NR_033189,NR_027469,NR_027468	chr1,chr1,chr1	+,-,-	LOC100130000,LOC100286793,FLJ39739	-49398,7625,7495
chr1:143735963-143736998	chr1	+	144333072	144333129	False	NR_024584,NM_001037675,NR_024510,NR_024511	chr1,chr1,chr1,chr1	-,+,-,-	LOC728875,NBPF9,LOC728855,LOC728855	8683,281829,7701,7701
chr1:143735963-143736998	chr1	+	144513321	144513378	False	NR_024584,NM_001037675	chr1,chr1	-,+	LOC728875,NBPF9	8648,101580
chr1:143735963-143736998	chr1	-	149584093	149584230	False	NM_001024599,NR_024510	chr1,chr1	-,+	HIST2H2BF,LOC728855	-184864,-7698
chr1:143735963-143736998	chr1	+	147923984	147924472	False	NM_001097616,NR_027468	chr1,chr1	+,-	GPR89C,FLJ39739	-498483,7560
chr1:15852253-15853045	chr1	+	15852260	15852990	True	NM_015291,NM_032996,NM_001229	chr1,chr1,chr1	+,-,-	DNAJC16,CASP9,CASP9	361,-975,-1320
chr22:22989245-22989510	chr22	+	22989245	22989483	True	NM_199127,NR_024591	chr22,chr22	+,-	GGTLC2,POM121L1P	-514,-2233
chrX:154693308-154694227	chrX	+	154693419	154693947	True	NR_036049,NM_001007524,NM_001007523,NM_012151,NM_080720,NR_036260,NR_036259,NM_001017991,NM_001017990	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,-,-,-,-,+,+,-,-	MIR1184-1,F8A3,F8A2,F8A1,H2AFB3,MIR1184-3,MIR1184-2,H2AFB2,H2AFB1	-6292,-5158,-5158,-5143,-3823,-6292,-6292,-3831,-3823
chrX:154693308-154694227	chrX	-	154109489	154109539	False	NR_036049,NM_001007524,NM_001007523,NM_012151,NM_080720,NR_036260,NM_019863,NR_036259,NM_001017990	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,-,-,-,+	MIR1184-1,F8A3,F8A2,F8A1,H2AFB3,MIR1184-3,F8,MIR1184-2,H2AFB1	6244,5110,5110,5095,3777,6244,5088,6244,3777
chrX:154693308-154694227	chrX	-	154606076	154606604	False	NR_036049,NM_001007524,NM_001007523,NM_012151,NM_080720,NR_036260,NR_036259,NM_001017991,NM_001017990	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,-,-,+,+	MIR1184-1,F8A3,F8A2,F8A1,H2AFB3,MIR1184-3,MIR1184-2,H2AFB2,H2AFB1	6293,5159,5159,5144,3823,6293,6293,3831,3823
chr7:76024568-76025526	chr7	+	76024808	76025016	True	NM_080744,NM_007155	chr7,chr7	-,+	SRCRB4D,ZP3	14046,1824
chr4:69959674-69959948	chr4	+	69959674	69959808	True	NM_001074,NM_001144767	chr4,chr4	+,-	UGT2B7,UGT2B10	2384,-73561
chr11:63655953-63656309	chr11	+	63656061	63656285	True	NM_017490,NM_173587	chr11,chr11	+,-	MARK2,RCOR2	-125,28081
chr17:80405531-80407005	chr17	+	80405663	80406855	True	NM_012336,NM_001193655,NM_001193654,NM_001193657,NM_031968,NM_001193653,NM_001083608,NM_001033046,NM_001100408,NR_036514,NR_036517,NR_036516,NR_036519,NR_036518,NM_001038618,NM_001100407	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,-,+,-,+,-,-,-,-,-,-,-,+,-	NARF,C17orf62,C17orf62,C17orf62,NARF,C17orf62,NARF,C17orf62,C17orf62,C17orf62,C17orf62,C17orf62,C17orf62,C17orf62,NARF,C17orf62	9684,803,1908,1908,9684,1908,9684,1908,1908,1908,1908,1908,1908,1908,9204,1908
chr2:96872461-96873788	chr2	+	96872648	96873773	True	NM_020151,NM_001037228	chr2,chr2	-,+	STARD7,LOC285033	850,32203
chrY:9546860-9548844	chrY	+	9546928	9548767	True	NR_003591,NR_001534,NR_003592	chrY,chrY,chrY	+,-,-	TTTY8B,TTTY7,TTTY7B	-18270,4155,4155
chrY:9546860-9548844	chrY	-	6321612	6323451	False	NR_001533,NR_001534,NR_003592	chrY,chrY,chrY	-,+,+	TTTY8,TTTY7,TTTY7B	18270,-4155,-4155
chr7:99148554-99148913	chr7	+	99148723	99148820	True	NM_001009958,NM_145111,NM_001009960,NM_138494,NM_001085368,NM_001085367,NM_024061,NM_001083956,NM_001085366	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,-,+,+,+,+,+,+,+	ZNF655,FAM200A,ZNF655,ZNF655,ZNF655,ZNF655,ZNF655,ZNF655,ZNF655	7627,996,7627,7224,7627,7627,7224,7224,7224
chr19:36068655-36070371	chr19	+	36068809	36069802	True	NM_000704,NM_032635	chr19,chr19	-,+	ATP4A,TMEM147	-14249,-32316
chr2:74420959-74421493	chr2	+	74421148	74421417	True	NR_027405,NM_018221,NM_006636	chr2,chr2,chr2	+,-,+	MTHFD2,MOBKL1B,MTHFD2	4272,-15153,4272
chr18:45564577-45565099	chr18	+	45564800	45565082	True	NM_001142397,NM_001039360	chr18,chr18	+,-	CTIF,ZBTB7C	500344,98648
chr1:111059537-111060011	chr1	+	111059564	111060048	True	NM_005549,NR_003599	chr1,chr1	-,+	KCNA10,CYMP	1799,-36235
chr16:125211-125460	chr16	+	125244	125344	True	NM_022450,NM_001015052,NM_002434,NM_001015054	chr16,chr16,chr16,chr16	-,+,+,+	RHBDF1,MPG,MPG,MPG	-2615,2824,2824,1673
chr3:182508856-182510104	chr3	+	182509171	182509982	True	NM_014616,NM_020640	chr3,chr3	+,-	ATP11B,DCUN1D1	1308,188398
chr9:65602848-65603163	chr9	+	65602998	65603206	True	NR_024496,NM_015667	chr9,chr9	+,-	LOC442421,FAM75A7	891062,-93388
chr9:65602848-65603163	chr9	+	43861524	43861602	False	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	-230794,-176690
chr16:10520329-10520800	chr16	+	10520328	10520688	True	NM_024997,NM_001424	chr16,chr16	+,-	ATF7IP2,EMP2	2036,153909
chr6:146242443-146243083	chr6	+	146242454	146243129	True	NM_001042683,NM_000838	chr6,chr6	-,+	SHPRH,GRM1	42166,105652
chr3:30689259-30689752	chr3	+	30689498	30689788	True	NM_207359,NM_003242	chr3,chr3	-,+	GADL1,TGFBR2	246415,-41555
chr1:156031864-156032273	chr1	+	156031914	156032160	True	NM_020131,NM_014017,NM_001145264,NM_020387	chr1,chr1,chr1,chr1	-,+,+,+	UBQLN4,LAMTOR2,LAMTOR2,RAB25	-8398,-7448,-7448,-999
chr17:6927008-6927422	chr17	+	6927014	6927427	True	NR_030178,NM_174893,NM_001142798,NM_001142799,NR_029712,NM_181844	chr17,chr17,chr17,chr17,chr17,chr17	-,+,+,+,-,+	MIR497,C17orf49,C17orf49,C17orf49,MIR195,BCL6B	-5673,-9009,-9009,-9009,-5994,-696
chr16:3076687-3077109	chr16	+	3076728	3077076	True	NM_001142350,NM_024339,NM_017885,NM_001103175,NM_001002017,NM_001002018,NM_021195,NM_016639	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,-,-,-,-,-,+	THOC6,THOC6,HCFC1R1,CCDC64B,HCFC1R1,HCFC1R1,CLDN6,TNFRSF12A	-2747,-2747,-2441,8516,-2441,-2441,-8540,-6466
chr9:139887417-139887831	chr9	+	139887522	139887880	True	NM_183241,NM_004669	chr9,chr9	+,-	C9orf142,CLIC3	-703,3194
chr1:12228850-12229520	chr1	+	12228871	12229483	True	NM_001066,NM_138346	chr1,chr1	+,-	TNFRSF1B,KIAA2013	-1862,-242386
chr8:110986925-110987206	chr8	+	110986968	110987248	True	NM_014379,NM_004215	chr8,chr8	-,+	KCNV1,EBAG9	-9,-434709
chr14:99739439-99739665	chr14	+	99739482	99739690	True	NM_022898,NM_001099402,NM_138576	chr14,chr14,chr14	-,+,-	BCL11B,CCNK,BCL11B	-1660,208048,-1660
chr7:30215282-30215871	chr7	+	30215384	30215752	True	NM_152793,NR_037513	chr7,chr7	+,-	C7orf41,MIR550B1	-40883,113804
chr19:51360827-51361595	chr19	+	51360970	51361428	True	NM_138564,NM_001030047,NM_001030048,NM_001648,NM_001030050	chr19,chr19,chr19,chr19,chr19	-,+,+,+,+	KLK15,KLK3,KLK3,KLK3,KLK3	-26191,-2851,-2851,-2851,-2851
chr20:30539404-30539638	chr20	+	30539427	30539599	True	NM_030815,NM_001011718	chr20,chr20	-,+	PDRG1,XKR7	334,16205
chr22:19744695-19746080	chr22	+	19745122	19745946	True	NM_005992,NM_024627,NM_080647,NM_080646	chr22,chr22,chr22,chr22	+,-,+,+	TBX1,C22orf29,TBX1,TBX1	-947,96475,-947,-947
chr1:40916872-40918010	chr1	+	40916903	40918055	True	NM_023070,NM_001852	chr1,chr1	+,-	ZNF643,COL9A2	-617,-133964
chr8:17020257-17020738	chr8	+	17020301	17020699	True	NM_013354,NM_016353	chr8,chr8	-,+	CNOT7,ZDHHC2	83738,-6516
chr4:186127734-186127970	chr4	+	186127836	186127996	True	NM_020827,NM_031953	chr4,chr4	-,+	KIAA1430,SNX25	-2654,3287
chr15:69451448-69452460	chr15	+	69451663	69452481	True	NM_006305,NM_015554	chr15,chr15	-,+	ANP32A,GLCE	-338402,491
chr11:60637113-60638338	chr11	+	60637345	60638357	True	NM_004778,NM_207341	chr11,chr11	-,+	GPR44,ZP1	-13901,-2381
chr12:19566174-19567119	chr12	+	19566232	19566810	True	NM_033123,NM_001114176	chr12,chr12	-,+	PLCZ1,AEBP2	-675314,25797
chr3:120622148-120623202	chr3	+	120622147	120622754	True	NM_173825,NM_014980	chr3,chr3	-,+	RABL3,STXBP5L	-160763,4295
chr14:96152006-96152462	chr14	+	96152026	96152436	True	NM_001098725,NM_004918	chr14,chr14	-,+	TCL1A,TCL1B	28147,317
chr16:84539084-84539409	chr16	+	84539210	84539459	True	NM_014861,NM_020947	chr16,chr16	+,-	ATP2C2,KIAA1609	-137128,-922
chr11:119188342-119188721	chr11	+	119188378	119188738	True	NM_032015,NM_006500	chr11,chr11	+,-	RNF26,MCAM	16498,-538
chr15:83952794-83952997	chr15	+	83952794	83953046	True	NM_003027,NM_001717	chr15,chr15	+,-	SH3GL3,BNC1	163044,472
chr1:241595907-241597255	chr1	+	241596042	241597130	True	NM_002924,NM_003679	chr1,chr1	-,+	RGS7,KMO	-75564,98549
chr6:49580442-49581076	chr6	+	49580446	49581125	True	NM_001145652,NM_000324	chr6,chr6	+,-	C6orf141,RHAG	-62384,23519
chr22:42080206-42081081	chr22	+	42080275	42080744	True	NM_005008,NM_001003796,NM_001142964	chr22,chr22,chr22	-,-,+	NHP2L1,NHP2L1,C22orf46	-1719,4226,5802
chr5:179921521-179921777	chr5	+	179921604	179921702	True	NM_052863,NM_015455	chr5,chr5	-,+	SCGB3A1,CNOT6	96835,-238
chr17:28904813-28905338	chr17	+	28904842	28905116	True	NM_206832,NR_015341	chr17,chr17	-,+	TMIGD1,LRRC37BP1	-243777,-1410
chr7:75422440-75424173	chr7	+	75422471	75424163	True	NM_001040456,NM_006072	chr7,chr7	+,-	RHBDD2,CCL26	84153,-3407
chr20:46996249-46996797	chr20	+	46996301	46996819	True	NR_026958,NM_020820	chr20,chr20	+,-	LOC284749,PREX1	-7698,447651
chr20:46996249-46996797	chr20	-	46607475	46608260	False	NR_026958,NM_198596	chr20,chr20	+,-	LOC284749,SULF2	380393,-192115
chr19:36604991-36605308	chr19	+	36605063	36605317	True	NM_006233,NM_001281	chr19,chr19	-,+	POLR2I,TBCB	939,570
chr16:48679397-48679879	chr16	+	48679396	48679472	True	NM_153029,NM_031490	chr16,chr16	-,+	N4BP1,LONP2	-35276,-401242
chr11:60196654-60197171	chr11	+	60196811	60197189	True	NM_023945,NM_022349	chr11,chr11	+,-	MS4A5,MS4A6A	29,-246137
chr5:140051044-140051981	chr5	+	140051402	140051998	True	NM_017706,NM_194249	chr5,chr5	+,-	WDR55,DND1	-7069,1223
chr4:141272266-141272556	chr4	+	141272359	141272547	True	NM_001153446,NM_001153585,NM_001153690,NM_001153635,NR_033939	chr4,chr4,chr4,chr4,chr4	+,+,+,+,-	SCOC,SCOC,SCOC,SCOC,LOC100129858	-7813,-7795,-7795,-7813,22059
chr3:51533819-51534178	chr3	+	51533988	51534062	True	NM_001171904,NM_014703,NM_015106	chr3,chr3,chr3	-,-,+	VPRBP,VPRBP,RAD54L2	6,6,41533
chr2:101619640-101619882	chr2	+	101619715	101619781	True	NM_001098577,NM_000993,NM_001099693,NM_001102426	chr2,chr2,chr2,chr2	+,+,+,-	RPL31,RPL31,RPL31,TBC1D8	-1077,-1077,-1077,148115
chrX:151084676-151085362	chrX	+	151084967	151085391	True	NR_029973,NM_002362,NM_001011548,NM_001011549,NM_001011550	chrX,chrX,chrX,chrX,chrX	-,+,+,+,+	MIR452,MAGEA4,MAGEA4,MAGEA4,MAGEA4	42843,-309,-3657,5,1368
chrX:151084676-151085362	chrX	+	151087684	151087734	False	NR_029973,NM_002362,NM_001011548,NM_001011549,NM_001011550	chrX,chrX,chrX,chrX,chrX	-,+,+,+,+	MIR452,MAGEA4,MAGEA4,MAGEA4,MAGEA4	40500,-3026,-6374,-2338,-975
chrX:151084676-151085362	chrX	+	151082923	151083347	False	NR_029973,NM_002362,NM_001011548,NM_001011549,NM_001011550	chrX,chrX,chrX,chrX,chrX	-,+,+,+,+	MIR452,MAGEA4,MAGEA4,MAGEA4,MAGEA4	44887,1361,-1613,2049,3412
chr19:41387382-41387608	chr19	+	41387411	41387547	True	NM_030589,NR_001278,NM_000764	chr19,chr19,chr19	-,+,-	CYP2A7,CYP2B7P1,CYP2A7	1160,42622,1160
chr19:41387382-41387608	chr19	+	41355726	41355776	False	NM_000762,NM_053046	chr19,chr19	-,+	CYP2A6,EGLN2	626,-50443
chr17:53833355-53835091	chr17	+	53833474	53835098	True	NM_001102402,NM_021213,NM_001099640	chr17,chr17,chr17	+,+,-	PCTP,PCTP,TMEM100	-5059,-5185,-23992
chr8:86254960-86255749	chr8	+	86255070	86255723	True	NM_005181,NM_001164830	chr8,chr8	+,-	CA3,CA1	95332,-1127
chr6:139694855-139695183	chr6	+	139694867	139695113	True	NM_016217,NM_001168389,NM_001168388,NM_006079	chr6,chr6,chr6,chr6	+,-,-,-	HECA,CITED2,CITED2,CITED2	-238669,287,436,722
chr2:85843046-85843306	chr2	+	85843057	85843343	True	NM_006590,NM_001013649	chr2,chr2	+,-	USP39,C2orf68	-61,-3878
chr20:13957562-13959493	chr20	+	13957634	13959272	True	NM_080676,NM_025229	chr20,chr20	+,-	MACROD2,SEL1L2	16873,12040
chr7:767131-767472	chr7	+	767161	767521	True	NM_017802,NM_001164760,NM_001164758,NM_001164759	chr7,chr7,chr7,chr7	+,-,-,-	HEATR2,PRKAR1B,PRKAR1B,PRKAR1B	-874,-183,-72,-72
chr6:129279997-129281320	chr6	+	129280062	129281136	True	NM_001135648,NM_001079823	chr6,chr6	-,+	PTPRK,LAMA2	-438192,-75827
chr13:27132642-27134113	chr13	+	27132687	27133835	True	NM_005288,NM_006646	chr13,chr13	-,+	GPR12,WASF3	201138,-898
chr3:48473394-48475044	chr3	+	48473427	48474793	True	NM_024661,NM_001130082,NM_015933,NM_002673	chr3,chr3,chr3,chr3	-,-,+,-	CCDC51,PLXNB1,CCDC72,PLXNB1	6786,-1967,6892,-2555
chr1:116962726-116962938	chr1	+	116962743	116962969	True	NR_024126,NR_024125,NR_024124,NM_001160234,NR_027646,NR_027645	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,-	ATP1A1OS,ATP1A1OS,ATP1A1OS,ATP1A1,ATP1A1OS,ATP1A1OS	-1562,-1538,-1546,-36814,-1499,-1546
chr19:56094051-56094699	chr19	+	56094490	56094678	True	NM_153219,NM_152600	chr19,chr19	+,-	ZNF524,ZNF579	17051,-2279
chr1:32665321-32666033	chr1	+	32665388	32666051	True	NM_001160042,NM_018134,NM_001099434,NM_024296,NM_019118	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	IQCC,IQCC,DCDC2B,CCDC28B,TMEM234	5184,5184,8643,150,21928
chr20:3380467-3382112	chr20	+	3380505	3381742	True	NM_001009984,NM_139322	chr20,chr20	-,+	C20orf194,ATRN	6563,69922
chr2:176993698-176994096	chr2	+	176993743	176994129	True	NM_014213,NM_001080458,NM_001199747,NM_001199746,NM_019558	chr2,chr2,chr2,chr2,chr2	+,-,+,+,+	HOXD9,EVX2,HOXD8,HOXD8,HOXD8	-6381,-45053,292,338,338
chr3:12804581-12805021	chr3	+	12804718	12805022	True	NM_001162499,NM_018306	chr3,chr3	+,-	CAND2,TMEM40	33148,-3910
chr3:197027193-197028073	chr3	+	197027193	197027845	True	NM_001204386,NM_004087,NR_024388,NM_001098424	chr3,chr3,chr3,chr3	-,-,+,-	DLG1,DLG1,LOC152217,DLG1	-1746,-1746,-357758,-1746
chr16:90142682-90143713	chr16	+	90142764	90143714	True	NR_023348	chr16	+	GAS8	-53807
chr13:26623393-26624073	chr13	+	26623501	26624117	True	NM_001260,NM_001007538	chr13,chr13	+,-	CDK8,SHISA2	204638,1131
chrX:66788775-66790137	chrX	+	66788902	66790153	True	NM_001011645,NM_002547	chrX,chrX	+,-	AR,OPHN1	-270,863196
chr19:14049516-14050114	chr19	+	14049577	14049965	True	NM_138353,NM_024825	chr19,chr19	+,-	DCAF15,PODNL1	13353,-288
chrX:48775084-48775539	chrX	+	48775088	48775528	True	NM_005660,NM_006875,NM_001167992,NM_001032289,NM_001042498	chrX,chrX,chrX,chrX,chrX	-,-,+,-,-	SLC35A2,PIM2,PQBP1,SLC35A2,SLC35A2	-6171,935,-19364,-6155,-5853
chr12:52219693-52220277	chr12	+	52219695	52220130	True	NM_001130015,NM_001013690	chr12,chr12	+,-	ANKRD33,FIGNL2	61662,5628
chr7:764571-765986	chr7	+	764964	765846	True	NM_017802,NM_001164760,NM_001164758,NM_001164759	chr7,chr7,chr7,chr7	+,-,-,-	HEATR2,PRKAR1B,PRKAR1B,PRKAR1B	491,1182,1517,1517
chr6:47766780-47767361	chr6	+	47766782	47767340	True	NR_033806,NM_001013732	chr6,chr6	+,-	OPN5,C6orf138	-12029,269142
chr1:196543143-196544933	chr1	+	196543155	196544708	True	NM_198503,NM_001014975	chr1,chr1	-,+	KCNT2,CFH	32855,76299
chr16:3305239-3305821	chr16	+	3305320	3305804	True	NR_033904,NM_001198536,NM_000243	chr16,chr16,chr16	+,-,-	FLJ39639,MEFV,MEFV	7963,881,881
chr2:137767340-137768318	chr2	+	137767496	137768353	True	NM_001080427,NM_003467	chr2,chr2	+,-	THSD7B,CXCR4	-19098,-891771
chr1:151010570-151012091	chr1	+	151010898	151011684	True	NM_138278,NM_017860,NM_001159642,NM_001038707	chr1,chr1,chr1,chr1	+,+,+,-	BNIPL,C1orf56,BNIPL,CDC42SE1	-1922,8574,-1922,20491
chr7:134918621-134918949	chr7	+	134918636	134918839	True	NM_014149,NM_182489	chr7,chr7	-,+	WDR91,STRA8	-22320,-1956
chr22:37417270-37417636	chr22	+	37417333	37417495	True	NM_001013436,NR_024038,NM_021126,NM_003312,NM_001130517	chr22,chr22,chr22,chr22,chr22	+,+,+,-,+	MPST,MPST,MPST,TST,MPST	-1682,-1682,-1682,-1842,-1682
chr17:9938721-9939844	chr17	+	9938762	9939760	True	NM_004246,NM_201432,NM_001130831	chr17,chr17,chr17	+,-,-	GLP2R,GAS7,GAS7	-209432,364,-9139
chr21:40680213-40681022	chr21	+	40680454	40680789	True	NM_004627,NM_001007246,NM_018963,NR_033800,NM_033656	chr21,chr21,chr21,chr21,chr21	+,-,-,-,-	WRB,BRWD1,BRWD1,NCRNA00257,BRWD1	71423,4828,4828,6160,4828
chr5:10624896-10625690	chr5	+	10624908	10625633	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-60524,135805
chr22:47024249-47025375	chr22	+	47024764	47025331	True	NM_015124,NM_014246	chr22,chr22	+,-	GRAMD4,CELSR1	-2157,-91697
chr1:40032733-40033141	chr1	+	40032738	40033132	True	NR_003929,NM_181809,NM_003819,NR_002983,NM_001135653,NM_001135654	chr1,chr1,chr1,chr1,chr1,chr1	-,+,-,-,-,-	PPIEL,BMP8A,PABPC4,SNORA55,PABPC4,PABPC4	-7368,-75471,9440,101,9440,9440
chr1:27722244-27722591	chr1	+	27722299	27722605	True	NM_005281,NM_207397	chr1,chr1	+,-	GPR3,CD164L2	-3205,-12494
chr7:75991079-75991422	chr7	+	75991082	75991334	True	NM_012479,NM_007155	chr7,chr7	-,+	YWHAG,ZP3	-2740,35506
chr11:120531851-120532384	chr11	+	120531862	120532316	True	NM_012101,NM_014619	chr11,chr11	-,+	TRIM29,GRIK4	-522999,-885
chr5:167722384-167722726	chr5	+	167722526	167722693	True	NM_001161661,NM_015238,NM_001161662,NR_029520	chr5,chr5,chr5,chr5	+,+,+,-	WWC1,WWC1,WWC1,MIR103-1	-3512,-3512,-3512,265336
chr19:49108406-49108686	chr19	+	49108405	49108561	True	NM_017708,NM_133498	chr19,chr19	-,+	FAM83E,SPACA4	8183,1438
chr10:21828903-21830360	chr10	+	21829477	21829811	True	NM_004641,NM_001195628,NM_001195630,NM_207371,NM_001195626,NM_001195627	chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,-,+,+	MLLT10,MLLT10,MLLT10,C10orf140,MLLT10,MLLT10	-6433,-6433,-6433,-14866,-5960,-6433
chr21:46020680-46021181	chr21	+	46020870	46021074	True	NM_198689,NM_198688	chr21,chr21	+,-	KRTAP10-7,KRTAP10-6	-424,-8484
chr21:46020680-46021181	chr21	+	45994123	45994173	False	NM_198694,NM_198687	chr21,chr21	-,+	KRTAP10-5,KRTAP10-4	6358,-568
chr21:46020680-46021181	chr21	-	46011827	46011877	False	NM_198689,NM_198688	chr21,chr21	+,-	KRTAP10-7,KRTAP10-6	8619,559
chr19:55224542-55225430	chr19	+	55224713	55225226	True	NR_003061,NM_001127255	chr19,chr19	+,-	LILRP2,NLRP7	-5163,233704
chr19:1955442-1955744	chr19	+	1955585	1955785	True	NR_033400,NM_001319	chr19,chr19	-,+	C19orf34,CSNK1G2	-1037,-14475
chr11:1036438-1036686	chr11	+	1036481	1036639	True	NM_002457,NM_005961	chr11,chr11	+,-	MUC2,MUC6	38235,117
chr16:10524542-10525839	chr16	+	10524578	10525310	True	NM_024997,NM_001424	chr16,chr16	+,-	ATF7IP2,EMP2	-1905,149293
chr3:193966732-193967297	chr3	+	193966768	193967181	True	NR_024480,NM_005524	chr3,chr3	-,+	LOC100131551,HES1	63473,-112888
chr6:14862980-14863878	chr6	+	14863070	14863700	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	382826,799639
chr10:43278529-43279952	chr10	+	43278721	43279387	True	NM_014753,NM_006955	chr10,chr10	+,-	BMS1,ZNF33B	-825,-144729
chr7:100209303-100209535	chr7	+	100209469	100209581	True	NM_001040098,NM_001040097,NM_002593,NM_023948,NM_002319,NM_001040099	chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,-,+	MOSPD3,MOSPD3,PCOLCE,MOSPD3,LRCH4,MOSPD3	471,143,-9638,532,-25693,532
chr12:102272223-102272863	chr12	+	102272466	102272634	True	NM_018370,NM_024312	chr12,chr12	+,-	DRAM1,GNPTAB	-1420,-47821
chr11:18140390-18142213	chr11	+	18141108	18141422	True	NR_026576,NM_054031	chr11,chr11	-,+	SAA3P,MRGPRX3	-3429,1079
chr1:153507753-153508423	chr1	+	153507752	153508462	True	NM_002962,NM_002961,NM_006271,NM_019554,NM_014624	chr1,chr1,chr1,chr1,chr1	-,-,+,-,-	S100A5,S100A4,S100A1,S100A4,S100A6	5829,9870,92410,9870,305
chr9:82185132-82185725	chr9	+	82185142	82185736	True	NM_002072,NM_007005	chr9,chr9	-,+	GNAQ,TLE4	-1538923,1141
chr8:38326700-38327448	chr8	+	38326704	38327327	True	NM_001174065,NM_001174064,NM_015850,NM_001174066,NM_001174063,NM_023110,NM_023105,NM_001174067,NM_023106,NM_001199660	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,-,-,-,-,-,+	FGFR1,FGFR1,FGFR1,FGFR1,FGFR1,FGFR1,FGFR1,FGFR1,FGFR1,LETM2	-1341,-352,-352,-1341,-352,-352,-352,-1341,-352,-82106
chr17:45928957-45929168	chr17	+	45928976	45929044	True	NM_199262,NM_033413	chr17,chr17	-,+	SP6,LRRC46	4246,-20034
chr3:193938846-193939991	chr3	+	193938872	193939882	True	NR_024480,NM_005524	chr3,chr3	-,+	LOC100131551,HES1	90761,-84992
chr16:70560358-70561837	chr16	+	70560480	70561619	True	NM_012426,NR_003696,NM_015386,NR_037420,NM_001195139	chr16,chr16,chr16,chr16,chr16	+,+,-,+,-	SF3B3,SNORD111B,COG4,MIR3647,COG4	-2840,1785,-3023,1782,-3023
chr10:15088064-15088557	chr10	+	15088374	15088442	True	NM_001039844,NM_018324,NM_001039702	chr10,chr10,chr10	-,+,+	ACBD7,OLAH,OLAH	42391,-2540,-2540
chr22:20105509-20105922	chr22	+	20105548	20105937	True	NM_182984,NM_022727,NM_002882	chr22,chr22,chr22	-,-,+	TRMT2A,TRMT2A,RANBP1	-780,-780,-575
chr4:68564600-68565617	chr4	+	68564837	68565246	True	NR_015439,NM_018227	chr4,chr4	+,-	LOC550112,UBA6	1749,1704
chr12:56546586-56547693	chr12	+	56546787	56547735	True	NM_021019,NM_002475,NM_079423,NM_001130420,NM_001199629	chr12,chr12,chr12,chr12,chr12	+,+,+,-,+	MYL6,MYL6B,MYL6,SMARCC2,MYL6B	4309,-634,4309,35666,-634
chr12:123716795-123717311	chr12	+	123716795	123717311	True	NM_001143905,NM_001194995,NM_022782,NM_152269	chr12,chr12,chr12,chr12	+,+,-,+	C12orf65,C12orf65,MPHOSPH9,C12orf65	979,716,-10354,532
chr8:141650266-141650709	chr8	+	141650463	141650597	True	NR_023360,NM_001164623,NM_012154	chr8,chr8,chr8	+,-,-	CHRAC1,EIF2C2,EIF2C2	-129100,-4817,-4817
chr12:10203658-10205015	chr12	+	10203958	10204960	True	NM_207345,NM_016511	chr12,chr12	+,-	CLEC9A,CLEC1A	-20733,46695
chr10:124713992-124714363	chr10	+	124714058	124714290	True	NM_153336,NM_024942	chr10,chr10	+,-	PSTK,C10orf88	25265,-139
chr6:160153842-160154802	chr6	+	160153992	160154311	True	NM_004906,NM_152857,NM_152858,NR_037166	chr6,chr6,chr6,chr6	+,+,+,-	WTAP,WTAP,WTAP,LOC100129518	-5905,-5437,-5905,29119
chr2:10087890-10089212	chr2	+	10088532	10089174	True	NM_001037160,NM_198182	chr2,chr2	-,+	CYS1,GRHL1	131416,2617
chr1:150726883-150727984	chr1	+	150727368	150727845	True	NM_001199739,NM_001145415	chr1,chr1	-,+	CTSS,SETDB1	10639,170969
chr12:22092149-22093678	chr12	+	22092215	22093445	True	NM_020298,NM_018686,NM_020297,NM_005691	chr12,chr12,chr12,chr12	-,+,-,-	ABCC9,CMAS,ABCC9,ABCC9	-2587,105713,-2587,-2587
chrX:52845058-52845264	chrX	+	52845246	52845312	True	NM_130775,NM_001009616	chrX,chrX	+,-	XAGE5,SPANXN5	-4069,-18858
chr8:144909850-144910674	chr8	+	144909948	144910631	True	NM_078480,NR_033849,NM_014281,NM_001136033	chr8,chr8,chr8,chr8	-,+,-,-	PUF60,LOC100128338,PUF60,PUF60	957,-93689,957,616
chrX:7895785-7896604	chrX	+	7896016	7896645	True	NM_001142389,NM_001172672,NM_013452,NM_004650	chrX,chrX,chrX,chrX	-,-,+,-	PNPLA4,PNPLA4,VCX,PNPLA4	-236,-236,-85764,-541
chr22:43810535-43810745	chr22	+	43810601	43810736	True	NM_173050,NM_001044370	chr22,chr22	-,+	SCUBE1,MPPED1	-71246,-2639
chr10:50507440-50507640	chr10	+	50507469	50507661	True	NM_001080520,NM_199459,NM_001135196	chr10,chr10,chr10	-,+,+	DRGX,C10orf71,C10orf71	92296,-333,-333
chr5:132297210-132298834	chr5	+	132297358	132298591	True	NM_052971,NM_014423,NM_002154	chr5,chr5,chr5	+,-,+	LEAP2,AFF4,HSPA4	-88052,813,89070
chr15:58342845-58343764	chr15	+	58342905	58343782	True	NM_020980,NM_003888	chr15,chr15	+,-	AQP9,ALDH1A2	86625,14174
chr19:52646470-52647115	chr19	+	52646470	52646789	True	NM_014225,NM_178523	chr19,chr19	+,-	PPP2R1A,ZNF616	46265,-3279
chrX:82762052-82763119	chrX	+	82762056	82763151	True	NM_014496,NM_000307	chrX,chrX	-,+	RPS6KA6,POU3F4	679842,117
chr22:20066451-20066803	chr22	+	20066452	20066622	True	NR_037412,NM_001190326,NM_022727,NM_022720,NR_031706	chr22,chr22,chr22,chr22,chr22	+,+,-,+,+	MIR3618,DGCR8,TRMT2A,DGCR8,MIR1306	6646,1132,38198,1132,6958
chr17:21155209-21156207	chr17	+	21155246	21156099	True	NM_152914,NM_145109	chr17,chr17	-,+	C17orf103,MAP2K3	529,31868
chr8:22856870-22857240	chr8	+	22856928	22857256	True	NM_003842,NM_015178,NM_001160037	chr8,chr8,chr8	-,+,+	TNFRSF10B,RHOBTB2,RHOBTB2	69494,113,-3618
chr11:8959575-8960089	chr11	+	8959651	8960139	True	NM_020643,NM_020646,NM_182901	chr11,chr11,chr11	-,-,+	C11orf16,ASCL3,C11orf17	-5098,4493,-26900
chr19:10698082-10699209	chr19	+	10698263	10698930	True	NM_001145056,NM_005498	chr19,chr19	+,-	SLC44A2,AP1M2	14190,-272
chr21:45936543-45938164	chr21	+	45936647	45937894	True	NR_026548,NR_026547,NM_198691	chr21,chr21,chr21	+,+,-	C21orf90,C21orf90,KRTAP10-1	-23,-23,22241
chr7:43660664-43661790	chr7	+	43660684	43661671	True	NM_018224,NM_004760	chr7,chr7	-,+	C7orf44,STK17A	107469,-38048
chr17:19883594-19884813	chr17	+	19883842	19884707	True	NM_007202,NM_152904	chr17,chr17	-,+	AKAP10,SPECC1	-2713,105627
chr6:18262134-18263172	chr6	+	18262168	18263216	True	NM_001134709,NM_153042,NM_003472	chr6,chr6,chr6	-,+,-	DEK,KDM1B,DEK	1633,-106600,1633
chr1:222713484-222715333	chr1	+	222713516	222715282	True	NM_024746,NM_198551	chr1,chr1	-,+	HHIPL2,MIA3	6212,76161
chr8:109799213-109799468	chr8	+	109799287	109799481	True	NM_153015,NM_003301	chr8,chr8	-,+	TMEM74,TRHR	339,300194
chr8:120628503-120629447	chr8	+	120628527	120629462	True	NM_002514,NM_001040092	chr8,chr8	+,-	NOV,ENPP2	-200039,21695
chr16:57701997-57702654	chr16	+	57702084	57702560	True	NM_001130099,NM_170776	chr16,chr16	-,+	KIFC3,GPR97	129419,22
chr14:73524164-73525003	chr14	+	73524211	73525051	True	NM_021239,NM_021260	chr14,chr14	+,-	RBM25,ZFYVE1	169,-30291
chr14:50067023-50068705	chr14	+	50067751	50068529	True	NM_203467,NR_037792,NR_037793,NM_001030001,NM_152329	chr14,chr14,chr14,chr14,chr14	+,+,+,-,+	LRR1,LRR1,LRR1,RPS29,LRR1	-2387,-2387,-2387,-14657,-2387
chr22:20609629-20610243	chr22	+	20610116	20610278	True	NM_015672,NM_003426	chr22,chr22	-,+	RIMBP3,ZNF74	-148330,138201
chr22:20609629-20610243	chr22	-	18767242	18767404	False	NM_005675,NR_003267	chr22,chr22	+,-	DGCR6,GGT3P	126331,12120
chr22:20609629-20610243	chr22	-	21568353	21568515	False	NR_024583,NR_002829	chr22,chr22	+,-	POM121L8P,P2RX6P	68198,-169815
chr11:47280076-47281294	chr11	+	47280120	47281191	True	NM_130470,NM_001610,NM_001131064,NM_001130102,NM_001130101,NM_005693	chr11,chr11,chr11,chr11,chr11,chr11	+,-,-,+,+,+	MADD,ACP2,ACP2,NR1H3,NR1H3,NR1H3	9735,-9663,-9663,-9722,-674,-674
chr1:204184116-204184927	chr1	+	204184377	204184945	True	NM_005686,NM_198447	chr1,chr1	+,-	SOX13,GOLT1A	-142195,-1157
chr19:13883496-13883914	chr19	+	13883682	13883764	True	NM_032285,NR_036515,NM_014047,NM_001031727	chr19,chr19,chr19,chr19	+,-,+,+	MRI1,LOC284454,C19orf53,MRI1	-8401,63389,1492,-8401
chr3:197299580-197300112	chr3	+	197299870	197300152	True	NM_203315,NM_001011537	chr3,chr3	-,+	BDH1,FYTTD1	92,176271
chr12:6641853-6642352	chr12	+	6641893	6642370	True	NM_001039670,NM_002046	chr12,chr12	-,+	IFFO1,GAPDH	22930,1286
chr12:128081006-128082962	chr12	+	128081668	128082833	True	NR_033970,NR_033987	chr12,chr12	-,+	LOC440117,FLJ37505	-722432,283328
chr12:92539838-92540130	chr12	+	92539975	92540159	True	NR_027932,NM_001731	chr12,chr12	+,-	CLLU1,BTG1	275147,-302
chr2:211179705-211179999	chr2	+	211179791	211180049	True	NM_079420,NM_001122633	chr2,chr2	-,+	MYL1,CPS1	24,162356
chr18:32869460-32869838	chr18	+	32869460	32869743	True	NR_024566,NR_024565,NM_001166012,NM_001112734	chr18,chr18,chr18,chr18	+,+,-,-	ZNF271,ZNF271,ZSCAN30,ZSCAN30	492,492,510,510
chr17:56359934-56361832	chr17	+	56360078	56361780	True	NR_027647,NM_000250	chr17,chr17	+,-	LPO,MPO	-44342,-1782
chr5:176037722-176038023	chr5	+	176037787	176038059	True	NM_001099408,NM_052899	chr5,chr5	+,-	EIF4E1B,GPRIN1	19623,-656
chr3:51534990-51535485	chr3	+	51535146	51535524	True	NM_001171904,NM_014703,NM_015106	chr3,chr3,chr3	-,-,+	VPRBP,VPRBP,RAD54L2	-1128,-1128,40071
chr12:49107984-49109334	chr12	+	49107983	49109079	True	NM_001240,NR_029448	chr12,chr12	-,+	CCNT1,LOC255411	1758,12138
chr5:78810197-78810465	chr5	+	78810366	78810498	True	NM_004272,NM_001114393	chr5,chr5	-,+	HOMER1,PAPD4	-666,97744
chr21:40985080-40986861	chr21	+	40985281	40986779	True	NR_026543,NR_026542,NM_006057	chr21,chr21,chr21	-,-,+	C21orf88,C21orf88,B3GALT5	-532,-532,42474
chr5:178422155-178423042	chr5	+	178422301	178422927	True	NM_001136116,NM_000843	chr5,chr5	+,-	ZNF879,GRM6	27848,-177
chr15:35412842-35413380	chr15	+	35413040	35413396	True	NM_014106,NR_003144	chr15,chr15	-,+	ZNF770,LOC723972	-132543,116130
chr17:37713923-37715190	chr17	+	37713933	37715246	True	NM_032192,NM_006160	chr17,chr17	+,-	PPP1R1B,NEUROD2	67932,48988
chr14:91318529-91319164	chr14	+	91318726	91318997	True	NM_001010854,NM_001102366	chr14,chr14	-,+	TTC7B,C14orf159	-35965,261359
chr7:156686164-156686391	chr7	+	156686167	156686389	True	NM_022458,NM_138400	chr7,chr7	-,+	LMBR1,NOM1	-265,56027
chr2:97426919-97427121	chr2	+	97426923	97427137	True	NR_024521,NM_020184	chr2,chr2	-,+	LMAN2L,CNNM4	-21110,-335
chr16:10671220-10671552	chr16	+	10671285	10671513	True	NM_024997,NM_001424	chr16,chr16	+,-	ATF7IP2,EMP2	-148611,3076
chr12:53819642-53821480	chr12	+	53819677	53821529	True	NM_001193511,NM_020547,NM_001164691,NM_001164690	chr12,chr12,chr12,chr12	-,+,+,+	MAP3K12,AMHR2,AMHR2,AMHR2	71965,-2089,-2089,-2089
chr20:43973153-43974317	chr20	+	43973336	43974254	True	NM_002999,NM_001197129	chr20,chr20	-,+	SDC4,SYS1	2860,16322
chr19:45908840-45909377	chr19	+	45908840	45909292	True	NM_012099,NM_006663,NM_001142502	chr19,chr19,chr19	+,-,-	CD3EAP,PPP1R13L,PPP1R13L	174,-528,365
chr8:33341890-33342170	chr8	+	33341890	33342190	True	NM_032664,NM_032509	chr8,chr8	-,+	FUT10,MAK16	-11226,494
chr12:6993170-6993919	chr12	+	6993277	6993825	True	NM_032641,NR_033796,NR_002803	chr12,chr12,chr12	-,+,+	SPSB2,DSTNP2,RPL13P5	-10756,20,-183
chr11:108533701-108534767	chr11	+	108533775	108534767	True	NM_015065,NM_004398	chr11,chr11	-,+	EXPH5,DDX10	-69401,1048
chr2:202316963-202317729	chr2	+	202317128	202317654	True	NM_015049,NM_018571	chr2,chr2	-,+	TRAK2,STRADB	-809,-790
chr1:114358391-114358952	chr1	+	114358585	114358757	True	NR_037864,NM_018364	chr1,chr1	+,-	LOC100287722,RSBN1	40499,-3515
chr5:61706581-61707831	chr5	+	61706902	61707005	True	NM_014473,NM_016338,NM_001134779	chr5,chr5,chr5	-,+,+	DIMT1L,IPO11,IPO11	-7174,1567,7705
chr19:50881069-50881507	chr19	+	50881188	50881556	True	NM_007121,NM_002691,NM_004851	chr19,chr19,chr19	+,+,-	NR1H2,POLD1,NAPSA	-1559,6036,-12257
chr8:99129841-99130382	chr8	+	99129893	99130391	True	NM_015029,NM_001145861,NM_001145860,NM_005836	chr8,chr8,chr8,chr8	+,+,+,-	POP1,POP1,POP1,HRSP12	12,-423,-423,-475
chr11:210725-211484	chr11	+	210767	211497	True	NM_016526,NM_001098787,NM_021932	chr11,chr11,chr11	-,-,+	BET1L,BET1L,RIC8A	-3345,-3345,-2288
chr1:62206124-62206855	chr1	+	62206465	62206674	True	NM_176877,NM_032027	chr1,chr1	+,-	INADL,TM2D1	1474,-15370
chr3:49170060-49170513	chr3	+	49170099	49170511	True	NM_173546,NM_002292	chr3,chr3	+,-	KLHDC8B,LAMB2	38506,138
chr5:93446027-93447169	chr5	+	93446175	93446919	True	NM_032042,NM_001163417,NM_001163418,NR_028080,NM_032290	chr5,chr5,chr5,chr5,chr5	-,-,-,-,+	FAM172A,FAM172A,FAM172A,FAM172A,ANKRD32	535,535,535,535,507471
chr17:26551777-26552657	chr17	+	26552328	26552582	True	NR_003064,NR_028334	chr17,chr17	+,-	PYY2,FLJ40504	1006,81876
chr6:10722095-10723065	chr6	+	10722127	10722986	True	NM_001165258,NR_026736,NM_016462	chr6,chr6,chr6	+,-,+	TMEM14C,C6orf52,TMEM14C	161,-27097,161
chr7:76140034-76140566	chr7	+	76140532	76140604	True	NM_030570,NR_003262,NM_182684	chr7,chr7,chr7	+,-,+	UPK3B,FDPSL2A,UPK3B	-840,-36215,-840
chr16:50784084-50784841	chr16	+	50784084	50784884	True	NM_001042355,NM_015247,NM_001042412,NM_182854	chr16,chr16,chr16,chr16	+,+,+,-	CYLD,CYLD,CYLD,SNX20	-8178,-8178,-8110,-68820
chr8:142517604-142517936	chr8	+	142517796	142517972	True	NM_032611,NM_207414	chr8,chr8	+,-	PTP4A3,FLJ43860	-85840,-466
chr19:4667640-4668946	chr19	+	4667671	4668643	True	NM_001167942,NM_019107	chr19,chr19	+,-	TNFAIP8L1,C19orf10	-27693,1822
chr1:22136718-22137125	chr1	+	22136829	22137047	True	NM_001032730,NM_001013693	chr1,chr1	-,+	USP48,LDLRAD2	-27141,1710
chr7:152461181-152461583	chr7	+	152461381	152461443	True	NM_005431,NM_020445,NM_001040135	chr7,chr7,chr7	-,+,+	XRCC2,ACTR3B,ACTR3B	-88131,-4583,-4583
chrX:119598891-119600855	chrX	+	119599052	119600638	True	NM_013995,NM_002294,NM_001122606,NM_012069	chrX,chrX,chrX,chrX	-,-,-,+	LAMP2,LAMP2,LAMP2,ATP1B4	2617,2617,2617,-103169
chr5:156535386-156536135	chr5	+	156535558	156536172	True	NM_005546,NM_032782	chr5,chr5	+,-	ITK,HAVCR2	71734,16
chr4:5892362-5892626	chr4	+	5892509	5892645	True	NM_001313,NM_153717,NM_001014809	chr4,chr4,chr4	-,+,-	CRMP1,EVC,CRMP1	-2194,-179636,2190
chr9:129884759-129885045	chr9	+	129884817	129884971	True	NM_032293,NM_012098	chr9,chr9	+,-	GARNL3,ANGPTL2	141784,123
chr19:1525391-1526267	chr19	+	1525638	1526252	True	NR_026557,NM_213604	chr19,chr19	+,-	PLK5P,ADAMTSL5	-1611,-12450
chr22:31476192-31476797	chr22	+	31476274	31476814	True	NM_134269,NM_006932,NM_134270,NM_080430	chr22,chr22,chr22,chr22	+,+,+,-	SMTN,SMTN,SMTN,SELM	490,490,490,26787
chr16:66834843-66835055	chr16	+	66834848	66835012	True	NM_005182,NM_001136505	chr16,chr16	+,-	CA7,CCDC79	43269,561
chr21:43641344-43642201	chr21	+	43641425	43642204	True	NM_207174,NM_004915,NM_003226,NM_016818,NM_207629	chr21,chr21,chr21,chr21,chr21	+,+,-,+,+	ABCG1,ABCG1,TFF3,ABCG1,ABCG1	-1475,-2216,93553,-2216,-5296
chr12:6747138-6748849	chr12	+	6747210	6748748	True	NM_001164094,NM_001142961,NM_020400,NM_032489	chr12,chr12,chr12,chr12	+,-,-,-	COPS7A,LPAR5,LPAR5,ACRBP	84401,-6395,-1913,7882
chrX:100911704-100911945	chrX	+	100911712	100911778	True	NM_014782,NM_177949,NM_177948	chrX,chrX,chrX	-,-,+	ARMCX2,ARMCX2,ARMCX3	3135,3135,-33412
chr6:165497653-165498171	chr6	+	165497678	165498165	True	NM_144980,NR_027284	chr6,chr6	-,+	C6orf118,LOC441177	224997,902873
chr2:120280013-120280616	chr2	+	120280086	120280642	True	NM_001029996,NM_002980	chr2,chr2	+,-	PCDP1,SCTR	21382,1436
chr7:141441801-141442302	chr7	+	141441857	141442334	True	NM_003143,NR_015392	chr7,chr7	+,-	SSBP1,FLJ40852	-3742,-3827
chr11:3860454-3861573	chr11	+	3860502	3861403	True	NM_001665,NM_003156	chr11,chr11	-,+	RHOG,STIM1	861,15529
chr3:50331102-50332163	chr3	+	50331197	50332195	True	NM_001200016,NM_001200029,NM_003549,NM_001200030,NM_001200031,NM_001200032,NM_012191,NM_001200018,NM_153285,NM_007312,NM_153282,NM_153215,NM_153283,NM_006764,NM_033159	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,-,-,-,-,-,-,-,+,-,-,-	NAT6,HYAL3,HYAL3,HYAL3,HYAL3,HYAL3,NAT6,NAT6,HYAL1,HYAL1,HYAL1,C3orf45,HYAL1,IFRD2,HYAL1	4707,4148,4754,4754,4754,4754,4707,4175,8859,8859,8859,-14731,8859,-1171,8859
chr1:206679957-206680198	chr1	+	206679963	206680219	True	NM_182664,NM_001201478,NM_182663	chr1,chr1,chr1	+,-,+	RASSF5,EIF2D,RASSF5	659,105735,659
chr3:101439161-101441027	chr3	+	101439762	101441079	True	NR_002941,NM_000986,NM_024548	chr3,chr3,chr3	+,-,+	LOC285359,RPL24,CEP97	-8535,-34199,2414
chr7:128433872-128434267	chr7	+	128434020	128434264	True	NM_001201372,NM_001708,NM_022742	chr7,chr7,chr7	+,-,+	CCDC136,OPN1SW,CCDC136	-2607,-18176,-2021
chr21:26734352-26734636	chr12	+	13028758	13028822	False	NM_018654,NR_003932	chr12,chr12	-,+	GPRC5D,RPL13AP20	74548,-400
chr21:26734352-26734636	chr10	-	112696587	112696655	False	NR_026715,NM_007373	chr10,chr10	-,+	RPL13AP6,SHOC2	410,-17339
chr21:26734352-26734636	chr21	+	26734461	26734537	True	NR_024027,NR_001458	chr21,chr21	-,+	NCRNA00158,MIR155HG	69526,199919
chr17:74353068-74353624	chr17	+	74353215	74353671	True	NM_002766,NM_001142601	chr17,chr17	-,+	PRPSAP1,SPHK1	-2985,27018
chr10:91092338-91093571	chr10	+	91092351	91093620	True	NM_001549,NM_000235,NM_001031683	chr10,chr10,chr10	+,-,+	IFIT3,LIPA,IFIT3	-4800,-80691,-163
chr11:808975-809213	chr11	+	808979	809231	True	NM_001004,NM_145887,NR_002585,NM_145886,NM_020376	chr11,chr11,chr11,chr11,chr11	+,-,+,-,+	RPLP2,LRDD,SNORA52,LRDD,PNPLA2	704,-3729,2449,-3729,9669
chr17:1932036-1932790	chr17	+	1932137	1932625	True	NM_178568,NM_001383	chr17,chr17	-,+	RTN4RL1,DPH1	-3959,805
chr17:73762335-73762683	chr17	+	73762346	73762429	True	NM_000154,NM_001080419	chr17,chr17	-,+	GALK1,UNK	-1066,18251
chr17:38332387-38333501	chr17	+	38332547	38333420	True	NM_016339,NM_021724	chr17,chr17	+,-	RAPGEFL1,NR1D1	821,-75574
chr13:23752011-23752322	chr13	+	23752054	23752366	True	NM_000231,NM_014363	chr13,chr13	+,-	SGCG,SACS	2693,255525
chr1:197171361-197172540	chr1	+	197171367	197172452	True	NM_001193640,NM_194314	chr1,chr1	+,-	CRB1,ZBTB41	64881,-1695
chr16:29675134-29675783	chr16	+	29675174	29675776	True	NR_002593,NM_003123,NM_001030288	chr16,chr16,chr16	-,+,+	SLC7A5P1,SPN,SPN	-50136,-645,-925
chr1:11539155-11539393	chr1	+	11539159	11539363	True	NM_012168,NM_020780	chr1,chr1	-,+	FBXO2,PTCHD2	175575,19
chrX:32274766-32276053	chrX	+	32274916	32275456	True	NM_203391,NM_004023	chrX,chrX	+,-	GK,DMD	-1603496,-101330
chr16:47471261-47471722	chr16	+	47471492	47471692	True	NM_030790,NM_000293	chr16,chr16	-,+	ITFG1,PHKB	23373,23517
chr19:289450-289850	chr19	+	289737	289895	True	NM_177543,NM_003712,NM_001005240,NM_177526	chr19,chr19,chr19,chr19	-,-,+,-	PPAP2C,PPAP2C,OR4F17,PPAP2C	1324,1590,-179109,1590
chr1:212225376-212227018	chr1	+	212225425	212226570	True	NM_016448,NR_037667	chr1,chr1	+,-	DTL,INTS7	-16569,-16423
chr19:1248031-1248247	chr19	+	1248064	1248200	True	NM_001001975,NM_152769,NM_001687,NM_177401	chr19,chr19,chr19,chr19	+,-,+,+	ATP5D,C19orf26,ATP5D,MIDN	-6366,-10074,-6366,351
chr5:140475133-140475412	chr5	+	140475159	140475456	True	NM_018936,NM_018937,NM_031947	chr5,chr5,chr5	+,+,-	PCDHB2,PCDHB3,SLC25A2	-973,4777,208213
chr8:54167520-54169164	chr8	+	54167594	54168834	True	NM_000912,NM_005285	chr8,chr8	-,+	OPRK1,NPBWR1	-3400,-315185
chr3:20052149-20052518	chr3	+	20052331	20052553	True	NM_003884,NR_027694	chr3,chr3	+,-	KAT2B,C3orf48	28970,1262
chr20:46011188-46011713	chr20	+	46011293	46011675	True	NM_183048,NR_024594	chr20,chr20	-,+	ZMYND8,LOC100131496	-25819,-64098
chr17:26367911-26368585	chr17	+	26367910	26368568	True	NM_001076680,NM_016231	chr17,chr17	-,+	C17orf108,NLK	-147501,1119
chr17:72198912-72199224	chr17	+	72198997	72199273	True	NM_000999,NR_026914,NM_001035258	chr17,chr17,chr17	+,-,+	RPL38,MGC16275,RPL38	521,10237,521
chr4:7070241-7070463	chr4	+	7070284	7070508	True	NM_152293,NM_025196	chr4,chr4	+,-	TADA2B,GRPEL1	-25179,-484
chr3:57539936-57540637	chr3	+	57540162	57540678	True	NM_178504,NM_177966	chr3,chr3	-,+	DNAH12,PDE12	-10091,1302
chr10:116164596-116164798	chr10	+	116164642	116164750	True	NM_198496,NM_032550,NM_001001936	chr10,chr10,chr10	+,-,-	VWA2,AFAP1L2,AFAP1L2	-165675,-127,-127
chr15:69746016-69746458	chr15	+	69746082	69746371	True	NR_030714,NM_213725,NM_001003	chr15,chr15,chr15	-,+,+	MIR629,RPLP1,RPLP1	625491,-974,-974
chr19:54725380-54725862	chr19	+	54725458	54725714	True	NM_001013,NM_001081450,NM_006864	chr19,chr19,chr19	+,-,-	RPS9,LILRB3,LILRB3	-20783,1295,1295
chr19:54725380-54725862	chr19	+	54745210	54745466	False	NM_001013,NM_024318	chr19,chr19	+,-	RPS9,LILRA6	-40535,1308
chr1:228326030-228326405	chr1	+	228326127	228326340	True	NM_000858,NM_181465,NM_001159390,NM_001159391	chr1,chr1,chr1,chr1	+,-,+,+	GUK1,MRPL55,GUK1,GUK1	1588,-29114,1588,6063
chr10:75185609-75185961	chr10	+	75185690	75185948	True	NM_001024593,NM_173348	chr10,chr10	-,+	ZMYND17,FAM149B1	7421,-257864
chr6:35705056-35705849	chr6	+	35705247	35705691	True	NR_027117,NM_001145775,NM_145028	chr6,chr6,chr6	-,-,+	LOC285847,FKBP5,C6orf81	-523,-8887,-439
chr5:41925696-41925915	chr5	+	41925727	41925957	True	NM_033484,NM_012176,NM_000436	chr5,chr5,chr5	+,+,-	FBXO4,FBXO4,OXCT1	-422,-422,-54936
chr1:149397735-149398865	chr1	+	149397863	149398818	True	NR_027484,NM_001024599	chr1,chr1	+,-	FCGR1C,HIST2H2BF	-28620,461
chr1:149397735-149398865	chr1	-	120906403	120907358	False	NR_027337,NM_001004340	chr1,chr1	+,-	HIST2H2BA,FCGR1B	-420,28636
chr1:149397735-149398865	chr1	+	149782557	149783517	False	NM_001024599,NM_001161334,NM_001123375,NM_001034077	chr1,chr1,chr1,chr1	-,-,-,+	HIST2H2BF,HIST2H2BF,HIST2H3D,HIST2H4B	461,461,1769,20703
chr15:78631194-78631534	chr15	+	78631245	78631561	True	NM_004378,NM_025234	chr15,chr15	+,-	CRABP1,WDR61	1104,-39305
chr16:75464189-75465274	chr16	+	75464628	75465045	True	NM_006324,NM_007285	chr16,chr16	-,+	CFDP1,GABARAPL2	2405,135203
chr7:87848778-87849181	chr7	+	87848781	87849044	True	NM_021723,NM_003130,NM_198901	chr7,chr7,chr7	+,-,-	ADAM22,SRI,SRI	-285266,399,7314
chr14:93529272-93529499	chr14	+	93529271	93529541	True	NM_001142594,NR_002808	chr14,chr14	-,+	ITPK1,ITPK1-AS1	52772,4255
chr19:49218491-49218751	chr19	+	49218495	49218751	True	NM_001130915,NM_001097638,NM_182574	chr19,chr19,chr19	-,+,-	MAMSTR,FUT2,MAMSTR	4275,-19318,1513
chr16:4163863-4164078	chr16	+	4163880	4164066	True	NM_001116,NM_032575	chr16,chr16	-,+	ADCY9,GLIS2	2170,218158
chr3:193940078-193940555	chr3	+	193940284	193940358	True	NR_024480,NM_005524	chr3,chr3	-,+	LOC100131551,HES1	90285,-86411
chr1:10491006-10491242	chr1	+	10491122	10491238	True	NM_198544,NM_004401,NR_036462,NM_199294,NM_199006,NR_037187,NR_037186	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,-,+,+,+,+,+	APITD1-CORT,DFFA,APITD1,APITD1,APITD1-CORT,APITD1-CORT,APITD1-CORT	-1014,41425,-369,-1014,-1014,-369,-369
chr3:149530627-149530869	chr3	+	149530804	149530908	True	NM_007282,NM_001144960,NM_183381	chr3,chr3,chr3	+,-,+	RNF13,C3orf16,RNF13	-380,-20194,-380
chr14:20763926-20764891	chr14	+	20764051	20764791	True	NM_001042618,NM_138376	chr14,chr14	+,-	PARP2,TTC5	46981,9418
chrX:110187567-110188071	chrX	+	110187796	110188066	True	NM_001128167,NM_001128166,NM_001143983	chrX,chrX,chrX	+,+,-	PAK3,PAK3,CHRDL1	-334,-334,-148510
chr7:138602053-138602777	chr7	+	138602147	138602645	True	NM_001164665,NM_001085429	chr7,chr7	-,+	KIAA1549,TMEM213	63469,-119459
chr17:45772881-45773108	chr17	+	45773084	45773152	True	NM_014726,NM_145798	chr17,chr17	+,-	TBKBP1,OSBPL7	-505,126045
chr10:13139300-13140545	chr10	+	13139329	13140535	True	NM_031455,NM_021980,NM_001008212,NM_001008213,NM_001008211	chr10,chr10,chr10,chr10,chr10	-,+,+,+,+	CCDC3,OPTN,OPTN,OPTN,OPTN	-95625,1546,1546,1546,1546
chr19:17390259-17390577	chr19	+	17390401	17390575	True	NM_152363,NM_031941	chr19,chr19	+,-	ANKLE1,USHBP1	1878,-14857
chr7:96644278-96644780	chr7	+	96644287	96644749	True	NM_005221,NM_005222,NR_015448	chr7,chr7,chr7	-,+,-	DLX5,DLX6,DLX6-AS1	9444,-9055,-910
chr4:114835421-114837391	chr4	+	114835773	114837427	True	NM_001128174,NM_024590	chr4,chr4	+,-	UGT8,ARSJ	682183,63508
chr5:153831287-153832325	chr5	+	153831450	153832361	True	NM_001131062,NM_001131063,NM_024632,NR_024084,NR_037897	chr5,chr5,chr5,chr5,chr5	+,+,+,+,-	SAP30L,SAP30L,SAP30L,SAP30L,FLJ38109	-5984,-5984,-5984,-5984,-6068
chr17:76165624-76166358	chr17	+	76165872	76166308	True	NM_003258,NM_004710	chr17,chr17	-,+	TK1,SYNGR2	17027,-1252
chr10:119810876-119811945	chr10	+	119811201	119811872	True	NR_026940,NM_014904,NR_026941,NR_026939	chr10,chr10,chr10,chr10	+,-,+,+	CASC2,RAB11FIP2,CASC2,CASC2	-4920,-5087,-4920,-4920
chr16:12056238-12056815	chr16	+	12056493	12056569	True	NM_001130007,NM_001192	chr16,chr16	-,+	GSPT1,TNFRSF17	-45974,2394
chr11:18609449-18610022	chr11	+	18609453	18609802	True	NM_153347,NM_001040697,NM_018314	chr11,chr11,chr11	+,-,-	TMEM86A,UEVLD,UEVLD	110548,530,530
chr17:60552063-60553916	chr7	+	128167784	128167843	True	NM_183243,NM_018396	chr7,chr7	-,+	IMPDH1,METTL2B	-117748,-51061
chr2:172070054-172070570	chr2	+	172070451	172070537	True	NM_001136554,NM_001164821	chr2,chr2	-,+	TLK1,DCAF17	17337,220223
chr7:129708256-129708547	chr7	+	129708367	129708472	True	NM_016478,NM_014997	chr7,chr7	-,+	ZC3HC1,KLHDC10	-17134,1876
chrX:132094296-132095748	chrX	+	132094380	132095695	True	NM_001077188,NM_001042452,NM_147175	chrX,chrX,chrX	-,+,-	HS6ST2,MST4,HS6ST2	-30,-936795,-30
chr12:118811718-118812043	chr12	+	118811734	118811976	True	NM_022491,NM_016281	chr12,chr12	+,-	SUDS3,TAOK3	2381,-984
chr3:132071132-132072976	chr3	+	132071369	132073000	True	NM_032169,NM_001134194	chr3,chr3	-,+	ACAD11,ACPP	306025,-35222
chr5:140793471-140793688	chr5	+	140793474	140793748	True	NM_032091,NM_032090,NM_032101,NM_032100,NM_032092,NM_018927,NM_005642,NM_018926,NM_018914,NM_018913	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,-,+,+,+	PCDHGA11,PCDHGA10,PCDHGB7,PCDHGB6,PCDHGA11,PCDHGB7,TAF7,PCDHGB6,PCDHGA11,PCDHGA10	6788,-782,3465,-5755,6788,3511,-93123,-5755,6788,-782
chr14:76045363-76045846	chr14	+	76045390	76045874	True	NM_017791,NM_007176	chr14,chr14	+,-	FLVCR2,C14orf1	-501,81714
chr14:102279962-102281502	chr14	+	102280061	102281410	True	NM_002719,NM_178587,NM_178586,NR_031649	chr14,chr14,chr14,chr14	+,+,+,-	PPP2R5C,PPP2R5C,PPP2R5C,MIR1247	-3979,-3979,-3979,-253302
chr13:21752431-21752814	chr13	+	21752583	21752695	True	NM_001166017,NM_145061,NM_024026	chr13,chr13,chr13	-,-,+	SKA3,SKA3,MRP63	-1842,-1842,-2267
chr22:35697074-35697465	chr22	+	35697327	35697507	True	NM_001135729,NM_005368,NM_001135732,NM_001135730,NM_005488,NR_024194,NR_024195	chr22,chr22,chr22,chr22,chr22,chr22,chr22	+,-,+,+,+,+,+	TOM1,MB,TOM1,TOM1,TOM1,TOM1,TOM1	-2110,315927,-1581,-1581,-1581,-1581,-1581
chrX:40693756-40695598	chrX	+	40694116	40695412	True	NR_027761,NM_001195522	chrX,chrX	-,+	LOC100132831,LOC347411	-1667,-211349
chr16:29981804-29982832	chr16	+	29981935	29982864	True	NM_001083613,NM_004783,NM_016151,NM_194280,NM_003609	chr16,chr16,chr16,chr16,chr16	+,+,+,+,-	TMEM219,TAOK2,TAOK2,TMEM219,HIRIP3	-8646,2357,2357,-8646,24598
chr13:114146449-114147135	chr13	+	114146557	114146924	True	NM_001014283,NM_017905	chr13,chr13	-,+	DCUN1D2,TMCO3	-1534,-1301
chr3:187416527-187416802	chr3	+	187416535	187416783	True	NR_034062,NM_001004312	chr3,chr3	+,-	LOC100131635,RTP2	3370,3612
chr16:15951342-15952127	chr16	+	15951638	15951928	True	NM_002474,NM_001040113,NM_004996,NM_001040114,NM_022844	chr16,chr16,chr16,chr16,chr16	-,-,+,-,-	MYH11,MYH11,ABCC1,MYH11,MYH11	-751,-751,91505,-751,-751
chrX:150346668-150347057	chrX	+	150346679	150347097	True	NM_134446,NM_004224	chrX,chrX	-,+	CD99L2,GPR50	-279390,-1676
chr19:15834207-15834413	chr19	+	15834231	15834327	True	NM_013939,NR_033864	chr19,chr19	+,-	OR10H2,CYP4F24P	4506,56521
chr15:90318490-90318894	chr15	+	90318705	90318849	True	NM_001039958,NM_018670	chr15,chr15	+,-	MESP2,MESP1	739,-24165
chr14:70828513-70829199	chr14	+	70828528	70829063	True	NM_001204090,NM_003813,NM_016468	chr14,chr14,chr14	-,+,-	COX16,ADAM21,COX16	-2080,95153,-2080
chr11:73590840-73591586	chr11	+	73590930	73591484	True	NM_025155,NM_016565	chr11,chr11	+,-	PAAF1,CHCHD8	-2960,-3040
chr13:113622544-113622880	chr13	+	113622580	113622718	True	NR_034002,NM_001112732	chr13,chr13	-,+	MCF2L-AS1,MCF2L	284,38
chr22:51043419-51043690	chr22	+	51043445	51043705	True	NM_016431,NM_012324,NM_005198	chr22,chr22,chr22	+,+,-	MAPK8IP2,MAPK8IP2,CHKB	-1934,-4365,-22017
chr2:135475245-135475611	chr2	+	135475272	135475656	True	NM_138326,NM_030923	chr2,chr2	+,-	ACMSD,TMEM163	120529,965
chr20:18118321-18118660	chr20	+	18118394	18118680	True	NR_028402,NM_020536,NM_001164811,NM_021220	chr20,chr20,chr20,chr20	+,+,+,-	CSRP2BP,CSRP2BP,PET117,OVOL2	7062,4187,46,-79873
chr15:68496392-68497688	chr15	+	68496618	68497446	True	NM_033429,NM_015322,NM_001031733	chr15,chr15,chr15	-,+,-	CALML4,FEM1B,CALML4	1066,72694,1066
chr7:75929434-75929650	chr7	+	75929434	75929688	True	NM_012479,NM_001540	chr7,chr7	-,+	YWHAG,HSPB1	58704,2186
chr1:156308015-156308269	chr1	+	156308069	156308229	True	NR_036564,NR_036565,NM_005998,NM_001008800,NM_144627	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	CCT3,CCT3,CCT3,CCT3,C1orf182	27,27,27,27,-1015
chr16:21663930-21665453	chr16	+	21663986	21665323	True	NM_144672,NM_005849	chr16,chr16	+,-	OTOA,IGSF6	24511,-14
chr14:77843789-77844328	chr14	+	77843849	77844225	True	NM_001010860,NM_213601	chr14,chr14	+,-	SAMD15,TMED8	-138,-453
chr3:57260064-57260954	chr3	+	57260225	57260979	True	NM_012096,NM_003865	chr3,chr3	+,-	APPL1,HESX1	785,-25945
chr17:57297936-57298186	chr17	+	57297943	57298119	True	NM_182569,NM_182620,NM_001165994,NM_001165993	chr17,chr17,chr17,chr17	+,-,+,+	GDPD1,SKA2,GDPD1,GDPD1	-166,-65143,-166,-166
chr5:79282982-79283932	chr5	+	79283357	79283608	True	NM_003248,NM_001010891,NM_001167741	chr5,chr5,chr5	+,-,-	THBS4,MTX3,MTX3	47561,3539,3539
chr10:103984713-103986077	chr10	+	103984771	103985850	True	NM_005029,NM_152310	chr10,chr10	-,+	PITX3,ELOVL3	15431,292
chr17:76976977-76977637	chr17	+	76977021	76977627	True	NM_005567,NM_030968	chr17,chr17	-,+	LGALS3BP,C1QTNF1	-960,42623
chr16:84219428-84219879	chr16	+	84219519	84219866	True	NM_139174,NM_139353,NM_005679,NM_001145400	chr16,chr16,chr16,chr16	+,-,-,+	ADAD2,TAF1C,TAF1C,ADAD2	4856,847,847,4856
chr1:182921849-182922079	chr1	+	182921851	182921923	True	NM_030933,NM_002293	chr1,chr1	-,+	SHCBP1L,LAMC1	680,70671
chr16:73124012-73125032	chr16	+	73124321	73124491	True	NM_001164766,NR_027756	chr16,chr16	-,+	ZFHX3,HTA	-31787,1756
chr2:55846792-55848043	chr2	+	55847128	55847438	True	NM_080667,NM_020463,NM_001122964	chr2,chr2,chr2	+,-,-	CCDC104,SMEK2,SMEK2	-100447,-2332,-2332
chr5:132146211-132146814	chr5	+	132146228	132146562	True	NM_175873,NM_133456	chr5,chr5	+,-	ANKRD43,SHROOM1	2470,15490
chr12:56522378-56522970	chr12	+	56522389	56522957	True	NM_015292,NM_001130420,NM_001184796	chr12,chr12,chr12	+,-,+	ESYT1,SMARCC2,ESYT1	-454,60446,-454
chr2:191016447-191017712	chr2	+	191016749	191017626	True	NM_005259,NM_001042520	chr2,chr2	-,+	MSTN,C2orf88	-89294,-1828
chr1:204461908-204462421	chr1	+	204461913	204462459	True	NM_001204171,NM_002646	chr1,chr1	+,-	MDM4,PIK3C2B	23047,-2439
chr15:51898685-51899075	chr15	+	51898684	51899012	True	NM_001174116,NM_001165257	chr15,chr15	-,+	DMXL2,SCG3	16015,74537
chrX:152954541-152954770	chr16	-	32896243	32896391	False	NR_003083,NM_016212	chr16,chr16	-,+	SLC6A10P,TP53TG3	220,308588
chrX:152954541-152954770	chr16	+	33778936	33779084	False	NR_033866,NM_001205265	chr16,chr16	-,+	LOC390705,TP53TG3B	-480234,-516965
chrX:152954541-152954770	chrX	+	152954545	152954819	True	NM_001039582,NM_001142806,NM_005629,NM_001142805	chrX,chrX,chrX,chrX	-,+,+,+	PNCK,SLC6A8,SLC6A8,SLC6A8	-14729,146,-844,-844
chr11:61064485-61066316	chr11	+	61064610	61066294	True	NM_015533,NM_152718	chr11,chr11	+,-	DAK,VWCE	34359,-1822
chr7:138886565-138887702	chr7	+	138886786	138887752	True	NM_173569,NM_024625	chr7,chr7	+,-	UBN2,ZC3HAV1	28478,-92321
chr17:47927861-47928129	chr17	+	47927864	47928158	True	NM_001077504,NM_001077505,NM_001077506,NM_007067,NM_001077503,NM_170685	chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,+,-,-	TAC4,TAC4,TAC4,MYST2,TAC4,TAC4	-2485,-2485,-2485,-61934,-2485,-2485
chr1:43994608-43996381	chr1	+	43995093	43996410	True	NM_002840,NM_031207,NM_130440	chr1,chr1,chr1	+,-,+	PTPRF,HYI,PTPRF	136,-75433,136
chr16:10779197-10779822	chr16	+	10779503	10779859	True	NM_002484,NM_144674	chr16,chr16	+,-	NUBP1,TEKT5	57838,8993
chr9:19788408-19788714	chr9	+	19788452	19788580	True	NM_001193288,NM_020344,NM_001010887	chr9,chr9,chr9	-,-,+	SLC24A2,SLC24A2,ACER2	61,61,-379578
chr5:60630228-60630627	chr5	+	60630246	60630676	True	NM_001048249,NM_020928	chr5,chr5	-,+	C5orf43,ZSWIM6	-171944,-2204
chr12:6713363-6713997	chr12	+	6713533	6713988	True	NM_001273,NM_002046	chr12,chr12	-,+	CHD4,GAPDH	2613,-69927
chrX:40506614-40506865	chrX	+	40506695	40506775	True	NM_144970,NM_001195522	chrX,chrX	-,+	CXorf38,LOC347411	94,-23928
chr1:146696867-146697415	chr1	+	146696922	146697359	True	NM_001144830,NM_001461,NM_004284,NM_001144829	chr1,chr1,chr1,chr1	-,-,+,-	FMO5,FMO5,CHD1L,FMO5	-72,-72,16931,-72
chr5:61599161-61600393	chr5	+	61599309	61600326	True	NM_004520,NM_014473,NM_001098511	chr5,chr5,chr5	+,-,+	KIF2A,DIMT1L,KIF2A	1662,99465,1662
chrY:4868210-4868473	chrY	+	4868304	4868522	True	NM_032971,NR_001540	chrY,chrY	+,-	PCDH11Y,TTTY23	-88,1243179
chrY:4868210-4868473	chrX	+	91034397	91034559	False	NM_032967,NM_004538	chrX,chrX	+,-	PCDH11X,NAP1L3	-188,1894173
chr11:3508275-3509133	chr11	+	3508681	3509169	True	NM_007152,NR_024248	chr11,chr11	-,+	ZNF195,LOC650368	-108233,-106541
chr11:3508275-3509133	chr4	-	9093371	9093421	False	NM_001105662,NM_018942	chr4,chr4	+,-	USP17,HMX1	123709,-219828
chr11:3508275-3509133	chr8	-	8023485	8023535	False	NR_031689,NR_024362	chr8,chr8	-,+	MIR548I3,FLJ10661	-76874,62556
chr1:203018146-203018785	chr1	+	203018176	203018286	True	NM_015053,NM_002479	chr1,chr1	+,-	PPFIA4,MYOG	2024,37141
chr6:155420243-155421472	chr6	+	155420638	155421510	True	NM_012454,NM_016020	chr6,chr6	+,-	TIAM2,TFB1M	-9279,214157
chr1:39399356-39400049	chr1	+	39399667	39399749	True	NM_001136275,NM_017821	chr1,chr1	+,-	AKIRIN1,RHBDL2	57166,7765
chr8:53475913-53476304	chr8	+	53476018	53476256	True	NM_207413,NM_005285	chr8,chr8	-,+	FAM150A,NPBWR1	1815,376211
chr2:233926179-233926786	chr2	+	233926184	233926480	True	NM_001017915,NM_005541,NM_019850	chr2,chr2,chr2	+,+,-	INPP5D,INPP5D,NGEF	-1199,-1199,-48233
chr10:58119474-58120921	chr10	+	58119571	58120897	True	NM_001005413,NM_001190478,NM_007057,NM_032997	chr10,chr10,chr10,chr10	-,+,-,-	ZWINT,MTRNR2L5,ZWINT,ZWINT	187,-760872,187,187
chr18:51754613-51756481	chr18	+	51754891	51756518	True	NR_002970,NM_007195,NM_015832,NM_003927	chr18,chr18,chr18,chr18	-,+,-,-	SNORA37,POLI,MBD2,MBD2	-6109,39330,-3733,-3733
chr1:19635816-19636911	chr1	+	19635906	19636731	True	NM_003689,NM_001040125,NM_001040126,NM_017765	chr1,chr1,chr1,chr1	-,+,+,+	AKR7A2,PQLC2,PQLC2,PQLC2	1959,2008,2008,2008
chr6:42930825-42931043	chr6	+	42930868	42930928	True	NM_018960,NM_000287	chr6,chr6	+,-	GNMT,PEX6	-2419,16103
chr17:58469919-58470180	chr17	+	58470015	58470177	True	NM_181707,NM_032582	chr17,chr17	+,-	C17orf64,USP32	29687,-429
chr2:209111050-209111384	chr2	+	209111049	209111311	True	NM_005896,NM_001178000	chr2,chr2	-,+	IDH1,PIKFYVE	8551,19679
chr6:134663235-134663545	chr6	+	134663290	134663460	True	NM_004865,NM_001143676	chr6,chr6	+,-	TBPL1,SGK1	-389041,-24094
chr19:51332147-51333842	chr19	+	51332369	51333738	True	NM_138564,NM_001030050,NM_002257,NM_138563,NM_017509	chr19,chr19,chr19,chr19,chr19	-,+,-,-,-	KLK15,KLK3,KLK1,KLK15,KLK15	1091,24432,-5326,1091,1091
chr11:31528799-31529443	chr11	+	31528890	31529495	True	NM_144981,NM_019040	chr11,chr11	-,+	IMMP1L,ELP4	1731,1801
chr10:38252141-38253415	chr10	+	38252342	38253452	True	NM_145011,NM_006954	chr10,chr10	-,+	ZNF25,ZNF33A	12051,46125
chr11:44886578-44887611	chr11	+	44886623	44887541	True	NM_130783,NM_001076787	chr11,chr11	+,-	TSPAN18,TP53I11	-100703,85117
chr11:635785-636450	chr11	+	635802	636444	True	NM_000797,NM_021920	chr11,chr11	+,-	DRD4,SCT	860,-8629
chr6:6613896-6615160	chr6	+	6614059	6615052	True	NM_004271,NR_026970	chr6,chr6	+,-	LY86,LY86-AS1	-25176,8057
chr21:40031999-40032296	chr21	+	40032037	40032171	True	NM_005239,NM_004449,NM_001136154	chr21,chr21,chr21	+,-,-	ETS2,ERG,ERG	145677,1583,1583
chr1:50492889-50493210	chr1	+	50492934	50493254	True	NM_032785,NM_001144777	chr1,chr1	-,+	AGBL4,ELAVL4	-3308,20431
chr1:53908552-53909482	chr1	+	53908775	53909083	True	NM_033067,NR_002314	chr1,chr1	+,-	DMRTB1,FLJ40434	15988,-3082
chr11:45792319-45792986	chr11	+	45792326	45792948	True	NR_027134,NM_003654	chr11,chr11	+,-	DKFZp779M0652,CHST1	34,-105154
chr17:45265966-45266250	chr17	+	45265970	45266292	True	NM_001114091,NM_001002841,NM_001256	chr17,chr17,chr17	-,+,-	CDC27,MYL4,CDC27	423,20135,423
chr19:14605898-14606150	chr19	+	14605981	14606199	True	NM_001146693,NM_202494,NM_202468,NM_005716,NM_202469,NM_202467,NM_202470	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,-,-,-,-,-	LOC100130932,GIPC1,GIPC1,GIPC1,GIPC1,GIPC1,GIPC1	-6274,795,795,795,795,795,795
chr6:34665309-34666401	chr6	+	34665379	34666248	True	NM_022758,NM_024294,NM_003093	chr6,chr6,chr6	-,-,+	C6orf106,C6orf106,SNRPC	-754,-754,58622
chr22:45638095-45639305	chr22	+	45638520	45639128	True	NM_001009880,NM_001167574	chr22,chr22	-,+	KIAA0930,UPK3A	-1870,41739
chr5:173122717-173123030	chr5	+	173122766	173122902	True	NR_027109,NM_138369	chr5,chr5	+,-	LOC285593,BOD1	-116160,-79100
chr7:89778315-89779947	chr7	+	89779051	89779837	True	NM_012449,NM_152706	chr7,chr7	+,-	STEAP1,C7orf62	3851,-1354020
chr12:100886463-100887602	chr12	+	100886463	100887586	True	NM_152317,NM_005123	chr12,chr12	-,+	DEPDC4,NR1H4	-225606,-18835
chr1:43803667-43804448	chr1	+	43803802	43804396	True	NM_022821,NM_005373	chr1,chr1	-,+	ELOVL1,MPL	29353,-378
chr2:241568919-241569343	chr2	+	241569014	241569243	True	NM_005301,NM_001102467	chr2,chr2	+,-	GPR35,AQP12B	-4403,53125
chr11:2483643-2483997	chr11	+	2483648	2483752	True	NM_181798,NM_014555	chr11,chr11	+,-	KCNQ1,TRPM5	-1015,-39373
chr2:190450400-190451955	chr2	+	190450423	190451719	True	NM_019048,NM_014585	chr2,chr2	+,-	ASNSD1,SLC40A1	74405,-4886
chr22:30479695-30480051	chr22	+	30479829	30480077	True	NM_152510,NM_002309	chr22,chr22	+,-	HORMAD2,LIF	-3427,162769
chr11:134283294-134283508	chr11	+	134283398	134283552	True	NM_018644,NR_033852	chr11,chr11	-,+	B3GAT1,LOC283177	-1586,22823
chr7:1542850-1543193	chr7	+	1542855	1543219	True	NM_002360,NM_001080453	chr7,chr7	+,-	MAFK,INTS1	27148,849
chr15:55791031-55792910	chr15	+	55791147	55792477	True	NM_130810,NM_001033559,NR_037923,NM_001198784,NM_001033560	chr15,chr15,chr15,chr15,chr15	-,-,-,+,-	DYX1C1,DYX1C1,DYX1C1-CCPG1,FLJ27352,DYX1C1	8005,8005,-365,-90475,8005
chr18:29075131-29075941	chr18	+	29075188	29075700	True	NM_004775,NM_001943	chr18,chr18	-,+	B4GALT6,DSG2	189036,2326
chr22:29199374-29201042	chr22	+	29199557	29200404	True	NM_005080,NM_173510,NM_001079539	chr22,chr22,chr22	-,+,-	XBP1,CCDC117,XBP1	-2997,-30953,-2997
chr10:85984185-85984437	chr10	+	85984209	85984485	True	NM_001017924,NM_001012720	chr10,chr10	-,+	LRIT2,RGR	849,20323
chr10:43906918-43907974	chr10	+	43907089	43907773	True	NM_001098206,NR_026693,NM_001098204,NM_001098205,NM_004966	chr10,chr10,chr10,chr10,chr10	-,+,-,-,-	HNRNPF,ZNF487P,HNRNPF,HNRNPF,HNRNPF	-3790,24800,-2393,-2757,-2433
chr14:103568163-103568837	chr14	+	103568363	103568683	True	NM_001077594,NM_006035	chr14,chr14	+,-	EXOC3L4,CDC42BPB	-1933,-44621
chr10:126480578-126480909	chr10	+	126480713	126480941	True	NM_032182,NM_212554	chr10,chr10	+,-	FAM175B,METTL10	9412,-274
chr17:43860049-43860689	chr17_ctg5_hap1	-	1006876	1007456	False	NM_001145146,NM_001145147,NR_024559,NM_004382,NM_001145148	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	-,-,+,-,-	CRHR1,CRHR1,LOC100128977,CRHR1,CRHR1	-993,-993,-112233,-993,-993
chr17:43860049-43860689	chr17	+	43860072	43860652	True	NM_001145146,NM_001145147,NR_024559,NM_004382,NM_001145148	chr17,chr17,chr17,chr17,chr17	+,+,-,+,+	CRHR1,CRHR1,LOC100128977,CRHR1,CRHR1	993,993,112277,993,993
chr11:5712716-5713300	chr11	+	5712822	5713349	True	NM_006074,NM_001199573,NM_033092,NM_033034,NM_033093	chr11,chr11,chr11,chr11,chr11	+,+,-,-,-	TRIM22,TRIM22,TRIM5,TRIM5,TRIM5	-2057,-2057,-6483,-6483,-6483
chr12:68723000-68723587	chr12	+	68723025	68723490	True	NM_020128,NM_017440,NM_001205028,NM_001205029,NM_001010942	chr12,chr12,chr12,chr12,chr12	-,-,-,-,+	MDM1,MDM1,MDM1,MDM1,RAP1B	2722,2722,2722,2722,281161
chr4:164250476-164252281	chr4	+	164250872	164252229	True	NM_006174,NM_000909	chr4,chr4	+,-	NPY5R,NPY1R	12861,1768
chr20:44642093-44642328	chr20	+	44642095	44642321	True	NM_004994,NM_001134771,NM_022095	chr20,chr20,chr20	+,+,-	MMP9,SLC12A5,ZNF335	-4599,8007,-41262
chr2:74699299-74699642	chr2	+	74699328	74699616	True	NM_053050,NM_001146158,NM_006302,NM_022492	chr2,chr2,chr2,chr2	-,-,-,+	MRPL53,MOGS,MOGS,TTC31	376,-6791,-6791,10583
chr9:138372686-138373946	chr9	+	138372755	138373960	True	NM_014811,NM_001048265	chr9,chr9	+,-	KIAA0649,C9orf116	-1158,17851
chr4:22517066-22517282	chr4	+	22517077	22517183	True	NM_001128432,NM_145290	chr4,chr4	+,-	GBA3,GPR125	177364,539
chr9:113342010-113342234	chr9	+	113342218	113342278	True	NM_001166280,NM_153366	chr9,chr9	+,-	MUSK,SVEP1	88772,-58
chr1:17868556-17869414	chr1	+	17869006	17869448	True	NM_018125,NM_018715	chr1,chr1	+,-	ARHGEF10L,RCC2	-2728,-102786
chr11:119024778-119026122	chr11	+	119024813	119025994	True	NM_001145018,NM_022169,NM_001142505	chr11,chr11,chr11	-,+,+	CCDC153,ABCG4,ABCG4	40647,-5114,-4565
chr6:14938063-14938698	chr6	+	14938077	14938482	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	308044,724864
chrX:152080793-152081930	chrX	+	152080954	152081610	True	NM_001178108,NM_001178109,NM_001178106,NM_001178107,NM_001178113,NM_007150,NM_001178110,NM_001103150	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,+,+,-	ZNF185,ZNF185,ZNF185,ZNF185,ZNF185,ZNF185,ZNF185,PNMA5	1375,1375,1375,1375,4798,1375,1375,79201
chr6:43597885-43598196	chr6	+	43597927	43598191	True	NM_014628,NM_001003690,NM_019096	chr6,chr6,chr6	+,+,-	MAD2L1BP,MAD2L1BP,GTPBP2	5385,-699,-991
chr3:186501587-186501872	chr3	+	186501602	186501788	True	NR_002989,NM_001967,NR_002588,NR_031650,NM_002916,NR_002587,NR_002586	chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,-,+,+	SNORA81,EIF4A2,SNORA4,MIR1248,RFC4,SNORD2,SNORA63	2675,-292,3613,2672,22552,796,3299
chr14:76641271-76642033	chr14	+	76641372	76642060	True	NM_017972,NM_003239	chr14,chr14	+,-	C14orf118,TGFB3	-23165,-193280
chr9:90498089-90498350	chr9	+	90498174	90498350	True	NM_001039803,NM_178828	chr9,chr9	-,+	CDK20,C9orf79	91395,-454
chrX:48117894-48118522	chrX	+	48118034	48118350	True	NM_175723,NM_005635	chrX,chrX	-,+	SSX5,SSX1	-61835,-3288
chr17:41924435-41924788	chr17	+	41924479	41924713	True	NR_003562,NM_001168324,NM_001168323,NM_001168322,NM_145273	chr17,chr17,chr17,chr17,chr17	-,+,+,+,+	MPP3,CD300LG,CD300LG,CD300LG,CD300LG	-13932,-14,-14,-14,-14
chr18:44560301-44560666	chr18	+	44560344	44560704	True	NM_145653,NM_001100817,NM_016427,NM_031303	chr18,chr18,chr18,chr18	-,-,-,+	TCEB3C,TCEB3CL,TCEB3B,KATNAL2	-3895,-4131,1334,-33608
chr6:14962561-14963370	chr6	+	14962660	14962800	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	283726,700541
chr7:149152903-149153930	chr7	+	149152976	149153891	True	NM_015694,NR_036573	chr7,chr7	-,+	ZNF777,LOC155060	4225,-170656
chr5:38417175-38418190	chr5	+	38417541	38418229	True	NM_001127671,NM_182799	chr5,chr5	-,+	LIFR,EGFLAM	138569,-13942
chr12:6960153-6960384	chr12	+	6960184	6960364	True	NM_003481,NM_001098536,NM_031299	chr12,chr12,chr12	+,+,-	USP5,USP5,CDCA3	926,920,142
chr11:56263135-56264237	chr11	+	56263211	56263837	True	NM_001005282,NM_001013356	chr11,chr11	-,+	OR5M8,OR8U8	-4365,-120175
chr12:122754021-122755105	chr12	+	122754536	122754771	True	NM_030765,NM_022916	chr12,chr12	+,-	B3GNT4,VPS33A	-66371,-3468
chr20:32396180-32396998	chr20	+	32396267	32396612	True	NM_176812,NM_183397	chr20,chr20	+,-	CHMP4B,PXMP4	2497,-88131
chr19:1020135-1020407	chr19	+	1020134	1020422	True	NM_004368,NM_033420,NM_001033026,NM_201277	chr19,chr19,chr19,chr19	+,-,-,+	CNN2,C19orf6,C19orf6,CNN2	5875,769,769,5875
chr20:62738023-62738308	chr20	+	62738026	62738346	True	NM_001200019	chr20	+	OPRL1	-21708
chr9:39782804-39784461	chr9	+	39782898	39784465	True	NR_003528,NM_001085452	chr9,chr9	-,+	LOC653501,FAM75A1	-318372,100509
chr9:39782804-39784461	chr9	-	43721318	43721368	False	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	-90588,-36484
chr9:39782804-39784461	chr9	+	39253681	39255216	False	NM_033655,NM_001085452	chr9,chr9	-,+	CNTNAP3,FAM75A1	33134,100482
chr9:39782804-39784461	chr9	+	40596892	40598463	False	NM_001083124,NM_033160	chr9,chr9	+,-	FAM75A3,ZNF658	101827,193699
chr22:32666005-32666278	chr22	+	32666090	32666300	True	NM_014227,NM_006604	chr22,chr22	-,+	SLC5A4,RFPL3	-14772,84571
chr11:26710323-26710799	chr11	+	26710412	26710639	True	NM_178498,NM_203371	chr11,chr11	-,+	SLC5A12,FIBIN	32992,304988
chr5:140857315-140857731	chr5	+	140857319	140857713	True	NM_002588,NM_018928,NM_001079812,NM_032406,NM_032402,NM_032403	chr5,chr5,chr5,chr5,chr5,chr5	+,+,-,+,+,+	PCDHGC3,PCDHGC4,DIAPH1,PCDHGC4,PCDHGC3,PCDHGC3	-1801,7027,140959,7027,-1801,-1801
chr14:24870287-24871528	chr14	+	24870550	24871525	True	NM_001039771,NM_025081	chr14,chr14	-,+	CBLN3,NYNRIN	27256,-2609
chr7:25728162-25728468	chr7	+	25728170	25728508	True	NR_029597,NM_004289	chr7,chr7	-,+	MIR148A,NFE2L3	261153,463338
chr7:106301027-106301279	chr7	+	106301026	106301232	True	NM_175884,NM_002649	chr7,chr7	-,+	FLJ36031,PIK3CG	452,204691
chr4:115514570-115515055	chr4	+	115514585	115515065	True	NM_022569,NM_001128174	chr4,chr4	-,+	NDST4,UGT8	520017,4545
chr20:31408050-31408477	chr20	+	31408334	31408518	True	NM_012325,NM_053041	chr20,chr20	+,-	MAPRE1,COMMD7	-690,-76520
chr11:74022518-74022750	chr11	+	74022520	74022728	True	NM_182904,NM_016147	chr11,chr11	-,+	P4HA3,PPME1	21,-140203
chr20:33291576-33291824	chr20	+	33291704	33291872	True	NM_080476,NM_021202	chr20,chr20	-,+	PIGU,TP53INP2	-26615,275
chr7:149320897-149321384	chr7	+	149320942	149321276	True	NM_032534,NR_027788,NR_027789	chr7,chr7,chr7	+,-,-	KRBA1,ZNF767,ZNF767	90871,655,655
chr6:114227393-114228833	chr6	+	114227774	114228861	True	NM_001527,NR_027060	chr6,chr6	-,+	HDAC2,FLJ34503	63548,-2284
chr1:186336282-186337664	chr1	+	186336501	186337221	True	NM_017847,NM_003292,NM_001164246,NM_001164245	chr1,chr1,chr1,chr1	+,-,+,+	C1orf27,TPR,C1orf27,C1orf27	7668,7296,7668,7668
chr22:48884542-48884851	chr22	+	48884554	48884890	True	NR_033377,NM_001082967	chr22,chr22	-,+	FLJ46257,FAM19A5	-857236,397
chr14:103989902-103991398	chr14	+	103989973	103990869	True	NM_152307,NM_001823	chr14,chr14	+,-	TRMT61A,CKB	4639,-803
chr15:57002042-57003687	chr15	+	57002257	57003385	True	NM_003205,NM_001002843	chr15,chr15	+,-	TCF12,ZNF280D	207447,22463
chr11:122931265-122932344	chr11	+	122931416	122932158	True	NR_027288,NM_153201,NM_006597	chr11,chr11,chr11	+,-,-	LOC341056,HSPA8,HSPA8	-43194,736,736
chr1:89846029-89847873	chr1	+	89846028	89847904	True	NM_052942,NM_198460	chr1,chr1	-,+	GBP5,GBP6	-107484,-16643
chr2:229394415-229395986	chr2	+	229394455	229395992	True	NM_178821,NM_030623	chr2,chr2	+,-	WDR69,SPHKAP	-658187,-348094
chr17:41923748-41924435	chr17	+	41923873	41924290	True	NR_003562,NM_001168324,NM_001168323,NM_001168322,NM_145273	chr17,chr17,chr17,chr17,chr17	-,+,+,+,+	MPP3,CD300LG,CD300LG,CD300LG,CD300LG	-13326,225,225,225,225
chr1:246581995-246582681	chr1	+	246582023	246582719	True	NM_001139459,NM_022743	chr1,chr1	+,-	CNST,SMYD3	146919,-1309
chr10:93681353-93682612	chr10	+	93681584	93682512	True	NM_152429,NM_003972	chr10,chr10	-,+	FGFBP3,BTAF1	-12326,1223
chr7:29696326-29696754	chr7	+	29696356	29696794	True	NR_036482,NR_024278	chr7,chr7	+,-	DPY19L2P3,LOC646762	27975,28012
chr7:29696326-29696754	chr7	-	32797087	32797139	False	NR_036680,NR_036501	chr7,chr7	-,+	DPY19L1P1,LOC401321	-38307,758
chr17:19028899-19029944	chr17	+	19029202	19029663	True	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	1118,-78866
chr17:19028899-19029944	chr17	-	18951506	18951967	False	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	78814,-1170
chr17:74135583-74136169	chr17	+	74135594	74136148	True	NM_180990,NM_001454	chr17,chr17	+,-	ZACN,FOXJ1	-60382,1282
chr22:38577727-38578068	chr22	+	38577786	38578110	True	NM_003560,NM_001199562,NM_001161572,NM_001004426	chr22,chr22,chr22,chr22	-,-,+,-	PLA2G6,PLA2G6,MAFF,PLA2G6	-25,22,19828,-25
chr2:97523306-97523581	chr2	+	97523447	97523509	True	NM_016466,NM_199078	chr2,chr2	-,+	ANKRD39,CNNM3	297,-41507
chr5:75915636-75917033	chr5	+	75915668	75917062	True	NR_028375,NM_004101	chr5,chr5	+,-	NCRUPAR,F2RL2	90700,2228
chr11:7717051-7718210	chr11	+	7717326	7718202	True	NM_198185,NR_027711	chr11,chr11	-,+	OVCH2,OR5E1P	9789,152395
chr17:1419519-1419819	chr17	+	1419593	1419807	True	NM_130766,NM_016532,NM_001135642,NR_028514	chr17,chr17,chr17,chr17	-,-,-,+	INPP5K,INPP5K,INPP5K,LOC100306951	425,425,425,405
chr7:139166537-139167610	chr7	+	139166728	139167490	True	NM_198508,NM_001080511	chr7,chr7	-,+	KLRG2,CLEC2L	1019,41183
chr12:113795612-113795891	chr12	+	113795732	113795856	True	NM_001159727,NM_173542,NM_024959	chr12,chr12,chr12	+,+,-	PLBD2,PLBD2,SLC24A6	514,514,-22807
chr17:51835668-51836009	chr17	+	51835841	51835912	True	NM_032559,NR_027941	chr17,chr17	+,-	KIF2B,COX11	64326,1210209
chr12:72678524-72679591	chr12	+	72678750	72679172	True	NR_026836,NM_013381	chr12,chr12	-,+	LOC283392,TRHDE	-11461,-12282
chrX:119697179-119698012	chrX	+	119697353	119697845	True	NM_014060,NM_001079872	chrX,chrX	+,-	MCTS1,CUL4B	39898,-2536
chr1:172717549-172718248	chr1	+	172717561	172718217	True	NM_000639,NM_005092	chr1,chr1	+,-	FASLG,TNFSF18	-89427,301936
chr1:155024877-155025299	chr1	+	155024932	155025262	True	NM_144622,NM_207191,NM_207196,NM_207197,NM_207194,NM_207195,NM_003815	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,+,+,+,+	DCST2,ADAM15,ADAM15,ADAM15,ADAM15,ADAM15,ADAM15	-18675,-1221,-1221,-1221,-1221,-1221,-1221
chr22:46934853-46935159	chr22	+	46934871	46935185	True	NM_015124,NM_014246	chr22,chr22	+,-	GRAMD4,CELSR1	87472,-1804
chr13:80050955-80052109	chr13	+	80051144	80052122	True	NM_019080,NM_001161407,NM_022118	chr13,chr13,chr13	+,+,-	NDFIP2,NDFIP2,RBM26	3136,3136,-71221
chr22:30781443-30782326	chr22	+	30781846	30782184	True	NM_033382,NM_001017981	chr22,chr22	+,-	SEC14L2,RNF215	10745,1168
chr14:103755774-103756235	chr14	+	103756174	103756238	True	NR_033938,NM_001969	chr14,chr14	-,+	LOC100131366,EIF5	-100809,44254
chr7:115891591-115892047	chr7	+	115891761	115892093	True	NM_152829,NM_012252	chr7,chr7	+,-	TES,TFEC	-28808,-220963
chr1:2283019-2284764	chr1	+	2283102	2284708	True	NM_007033,NR_024489	chr1,chr1	+,-	RER1,LOC100129534	38505,220
chr8:37411346-37411861	chr8	+	37411345	37411841	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	141459,193773
chr4:965734-965981	chr4	+	965736	966029	True	NM_000203,NM_001347	chr4,chr4	+,-	IDUA,DGKQ	14755,1365
chr1:49242569-49242795	chr1	+	49242642	49242815	True	NM_024603,NM_001135181	chr1,chr1	-,+	BEND5,SLC5A9	-95,-554336
chr12:50716228-50716478	chr12	+	50716264	50716506	True	NM_016357,NM_001170804	chr12,chr12	-,+	LIMA1,LARP4	-38911,78085
chr7:87101399-87102769	chr7	+	87101437	87102750	True	NM_000443,NM_021151,NM_018850,NM_018849	chr7,chr7,chr7,chr7	-,+,-,-	ABCB4,CROT,ABCB4,ABCB4	2319,-126550,2319,2319
chr11:60609194-60609441	chr11	+	60609201	60609427	True	NM_004778,NM_024098	chr11,chr11	-,+	GPR44,CCDC86	14067,1
chr1:154932595-154933948	chr1	+	154933152	154933758	True	NM_001826,NM_183001,NM_020524,NM_138300,NM_001130040	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	CKS1B,SHC1,PBXIP1,PYGO2,SHC1	13359,9515,-4585,550,9515
chr6:149807099-149807900	chr6	+	149807099	149807946	True	NM_207360,NM_138785	chr6,chr6	-,+	ZC3H12D,C6orf72	-951,79581
chr2:29092550-29092810	chr2	+	29092724	29092848	True	NM_017910,NM_015131	chr2,chr2	-,+	TRMT61B,WDR43	377,24684
chr15:73925980-73927673	chr15	+	73926045	73927582	True	NM_017455,NM_001161363,NM_001161364,NM_012428,NM_001024736	chr15,chr15,chr15,chr15,chr15	-,-,-,-,+	NPTN,NPTN,NPTN,NPTN,CD276	-292,-292,-292,-292,49039
chr21:11138263-11138879	chr21	+	11138265	11138472	True	NM_001187,NR_037458	chr21,chr21	-,+	BAGE,MIR3687	-39328,-1312113
chr1:111743057-111743409	chr1	+	111743177	111743451	True	NM_024901,NM_001025197	chr1,chr1	-,+	DENND2D,CHI3L2	60,26829
chr11:95620856-95621202	chr11	+	95620941	95621237	True	NM_014679,NM_016156	chr11,chr11	+,-	CEP57,MTMR2	-97362,36186
chr3:172233118-172233976	chr3	+	172233179	172233532	True	NM_018098,NR_033994,NM_003810,NM_001190942,NM_001190943	chr3,chr3,chr3,chr3,chr3	+,-,-,-,-	ECT2,TNFSF10,TNFSF10,TNFSF10,TNFSF10	238765,7816,7816,7816,7784
chr11:62433666-62434309	chr11	+	62433791	62434307	True	NR_004390,NM_024099,NM_001085372,NM_001043229	chr11,chr11,chr11,chr11	+,-,+,+	SNORA57,C11orf48,C11orf83,METTL12	-948,4984,4818,-1063
chr3:69789765-69790532	chr3	+	69789774	69790426	True	NM_015123,NM_198159	chr3,chr3	-,+	FRMD4B,MITF	-354344,-1239
chr16:615348-615924	chr16	+	615456	615920	True	NM_176677,NM_148920,NM_145270,NR_024121,NM_004204	chr16,chr16,chr16,chr16,chr16	+,+,+,-,+	NHLRC4,PIGQ,C16orf11,NCRNA00235,PIGQ	1111,4083,-5093,-38049,4083
chr11:82639534-82640465	chr11	+	82639537	82640472	True	NM_199418,NM_145018	chr11,chr11	-,+	PRCP,C11orf82	-27980,-26858
chr5:140187162-140187387	chr5	+	140187179	140187396	True	NM_031500,NM_031497,NM_018907,NM_018906,NM_002109	chr5,chr5,chr5,chr5,chr5	+,+,+,+,-	PCDHA4,PCDHA3,PCDHA4,PCDHA3,HARS	-558,-6447,-558,-6447,-116208
chr20:62255705-62256151	chr20	+	62255856	62256036	True	NM_016434,NM_012384	chr20,chr20	+,-	RTEL1,GMEB2	33126,2395
chr4:15640641-15642597	chr4	+	15640925	15642336	True	NM_001193534,NM_001145191	chr4,chr4	-,+	FBXL5,FAM200B	14758,41015
chr11:8930462-8931755	chr11	+	8930493	8931574	True	NM_020642,NM_005418,NM_182901	chr11,chr11,chr11	+,-,+	C11orf17,ST5,C11orf17	1126,974,1227
chr8:120827808-120828449	chr8	+	120827886	120828292	True	NM_003184,NM_022783	chr8,chr8	-,+	TAF2,DEPTOR	16840,57607
chr22:42393210-42394669	chr22	+	42393282	42394401	True	NM_152613,NM_024053	chr22,chr22	+,-	WBP2NL,CENPM	327,-50134
chrX:70982424-70982730	chrX	+	70982457	70982777	True	NR_001568,NM_001145140,NM_001145139	chrX,chrX,chrX	-,+,+	BCYRN1,CXorf49,CXorf49B	-33495,362,362
chrX:70982424-70982730	chrX	-	70938497	70938817	False	NR_034005,NM_001145140,NM_001145139	chrX,chrX,chrX	+,-,-	FLJ46446,CXorf49,CXorf49B	-21502,-362,-362
chr7:44227828-44228310	chr7	+	44227835	44228229	True	NM_006555,NM_000162	chr7,chr7	+,-	YKT6,GCK	12348,843
chr1:36270103-36270668	chr1	+	36270157	36270706	True	NM_017629,NM_022111	chr1,chr1	+,-	EIF2C4,CLSPN	3121,-34606
chr19:56000068-56000327	chr19	+	56000069	56000143	True	NM_024710,NM_001144950,NM_020378,NM_001195267	chr19,chr19,chr19,chr19	-,+,+,+	ISOC2,SSC5D,NAT14,SSC5D	-27020,-250,-3563,-250
chr18:49866893-49867245	chr18	+	49866905	49867267	True	NM_005215,NM_016626	chr18,chr18	+,-	DCC,MEX3C	-414,-1142854
chr6:57185942-57187232	chr6	+	57186144	57187126	True	NM_016277,NM_000947	chr6,chr6	-,+	RAB23,PRIM2	-99066,-3774
chr12:49259663-49259995	chr12	+	49259683	49260043	True	NM_014470,NM_033124	chr12,chr12	-,+	RND1,CCDC65	-30,37849
chr1:206966842-206967869	chr1	+	206967090	206967734	True	NM_153758,NM_000572	chr1,chr1	+,-	IL19,IL10	4480,-21251
chr14:92587136-92587360	chr14	+	92587172	92587234	True	NM_004545,NM_017437	chr14,chr14	-,+	NDUFB1,CPSF2	969,1063
chr12:60136966-60138706	chr12	+	60136965	60138739	True	NM_004731,NM_153377	chr12,chr12	+,-	SLC16A7,LRIG3	-53891,-822703
chr16:69600809-69601320	chr16	+	69600878	69601327	True	NM_173214,NR_031719,NM_001113178,NM_006599,NM_138714,NM_138713	chr16,chr16,chr16,chr16,chr16,chr16	+,-,+,+,+,+	NFAT5,MIR1538,NFAT5,NFAT5,NFAT5,NFAT5	-1932,-1107,-1932,-1932,-1932,-1932
chr11:76153411-76155113	chr11	+	76153730	76155141	True	NM_020193,NM_004705	chr11,chr11	+,-	C11orf30,PRKRIR	927,-61850
chr17:66195064-66195301	chr17	+	66195108	66195338	True	NR_027283,NM_001174166	chr17,chr17	+,-	LOC440461,SLC16A6	-358,92117
chr1:53909816-53910410	chr1	+	53909857	53910133	True	NM_033067,NR_002314	chr1,chr1	+,-	DMRTB1,FLJ40434	14938,-4164
chr19:8115775-8116171	chr19	+	8115847	8115963	True	NM_005624,NM_001419,NM_001201359	chr19,chr19,chr19	+,-,+	CCL25,ELAVL1,CCL25	1682,-45318,1682
chr5:178202544-178204081	chr5	+	178202650	178203621	True	NR_024035,NM_058230	chr5,chr5	-,+	AACSP1,ZNF354B	95,83332
chr12:491812-492471	chr12	+	492207	492320	True	NM_001042603,NM_001130147,NM_001130148	chr12,chr12,chr12	-,+,+	KDM5A,CCDC77,CCDC77	6363,6195,6195
chr12:101217324-101218544	chr12	+	101217323	101218561	True	NM_145913,NM_178826	chr12,chr12	-,+	SLC5A8,ANO4	385511,-29006
chr4:46887783-46889448	chr4	+	46887857	46889387	True	NM_130902,NM_000812	chr4,chr4	-,+	COX7B2,GABRB1	21916,143907
chr3:119514047-119514443	chr3	+	119514071	119514489	True	NM_005694,NM_022002	chr3,chr3	-,+	COX17,NR1I2	-117828,-12565
chr12:53895434-53895936	chr12	+	53895476	53895974	True	NM_003717,NM_004178,NM_134323,NM_001193511,NM_134324,NM_006301	chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,-,+,-	NPFF,TARBP2,TARBP2,MAP3K12,TARBP2,MAP3K12	5498,-822,-822,-2032,-150,-2032
chr11:74204569-74205782	chr11	+	74204716	74205623	True	NM_006591,NM_001144869	chr11,chr11	+,-	POLD3,LIPT2	98005,39
chr11:111170676-111171335	chr11	+	111170740	111171298	True	NM_001136105,NR_034154	chr11,chr11	+,-	C11orf93,C11orf92	-815,-201
chr15:75103236-75104051	chr15	+	75103541	75103705	True	NM_021819,NM_001099436	chr15,chr15	+,-	LMAN1L,ULK3	1488,31905
chr3:39532430-39532776	chr3	+	39532519	39532803	True	NM_001171174,NR_003090	chr3,chr3	-,+	CX3CR1,MOBP	-209293,-23504
chr7:140857553-140857986	chr7	+	140857570	140857904	True	NM_053035,NM_001195278	chr7,chr7	-,+	MRPS33,LOC100131199	-142789,-83597
chr1:862600-863042	chr1	+	862653	863047	True	NM_152486,NR_026874	chr1,chr1	+,-	SAMD11,FLJ39609	-1583,-7836
chr19:3866384-3867344	chr19	+	3866429	3867283	True	NM_001145640,NM_033064,NM_015174,NR_027149	chr19,chr19,chr19,chr19	-,+,-,-	ZFR2,ATCAY,ZFR2,ZFR2	1794,13334,1794,1794
chr8:86092346-86092903	chr8	+	86092541	86092747	True	NM_001099670,NM_001951,NM_001083588,NM_001083589	chr8,chr8,chr8,chr8	-,+,+,+	C8orf59,E2F5,E2F5,E2F5	39947,-2986,-2986,7162
chr10:104630496-104631023	chr10	+	104630629	104630723	True	NM_000102,NM_020682	chr10,chr10	-,+	CYP17A1,AS3MT	-33339,-1470
chr18:8371764-8372108	chr18	+	8371861	8372031	True	NM_001025300,NR_024419	chr18,chr18	+,-	RAB12,LOC100192426	237411,-4829
chr20:37213711-37214153	chr20	+	37213728	37214168	True	NM_001018082,NR_027241	chr20,chr20	+,-	ADIG,LOC388796	-3941,-149710
chr13:27824712-27825402	chr13	+	27825046	27825438	True	NM_000982,NR_002574,NM_182488,NR_026911,NR_002575	chr13,chr13,chr13,chr13,chr13	+,+,-,+,+	RPL21,SNORD102,USP12,RPL21P28,SNORA27	253,3762,-79013,254,4099
chr5:158755313-158755825	chr5	+	158755340	158755874	True	NR_037889,NM_002187	chr5,chr5	+,-	LOC285626,IL12B	2651,1657
chr22:20008258-20008458	chr22	+	20008262	20008456	True	NM_152906,NM_001670	chr22,chr22	+,-	C22orf25,ARVCF	174,-3953
chr10:38147214-38148027	chr10	+	38147291	38147895	True	NM_021045,NM_006954	chr10,chr10	-,+	ZNF248,ZNF33A	-805,151682
chr6:36810776-36812434	chr6	+	36810981	36812393	True	NM_020939,NM_152734	chr6,chr6	-,+	CPNE5,C6orf89	-3761,41246
chr20:44455971-44456352	chr20	+	44456070	44456282	True	NM_003279,NM_033421,NM_001042632,NM_001042633,NM_152897	chr20,chr20,chr20,chr20,chr20	-,+,+,+,+	TNNC2,SNX21,SNX21,SNX21,SNX21	-117,6187,6187,6187,6187
chr7:108084879-108086499	chr7	+	108085093	108086484	True	NM_012328,NM_001193582	chr7,chr7	+,-	DNAJB9,NRCAM	123704,10407
chr22:46930310-46930877	chr22	+	46930334	46930918	True	NM_015124,NM_014246	chr22,chr22	+,-	GRAMD4,CELSR1	91739,2199
chr5:150326385-150326860	chr5	+	150326478	150326870	True	NM_002084,NR_026867	chr5,chr5	+,-	GPX3,ZNF300P1	73128,-332
chr7:30791093-30792315	chr7	+	30791092	30792248	True	NM_001202481,NM_006774,NR_037598,NM_001199219	chr7,chr7,chr7,chr7	-,+,+,+	CRHR2,INMT,INMT-FAM188B,INMT	-51373,-100,-100,-100
chr12:30838164-30838579	chr12	+	30838364	30838595	True	NM_001190995,NM_001080509	chr12,chr12	-,+	IPO8,TSPAN11	-8186,241242
chr5:178330964-178331794	chr5	+	178331089	178331698	True	NM_000843,NM_030613	chr5,chr5	-,+	GRM6,ZFP2	90485,-8238
chr3:125605424-125607405	chr3	+	125605503	125607224	True	NM_001015050,NR_024250	chr3,chr3	-,+	ALG1L,LOC100125556	48714,28219
chr1:11938598-11938829	chr1	+	11938720	11938878	True	NM_002521,NR_037806	chr1,chr1	-,+	NPPB,NPPA-AS1	-19728,-38395
chr1:151799516-151799998	chr1	+	151799613	151799849	True	NR_024237,NM_001001523,NM_005060	chr1,chr1,chr1	+,-,-	LOC100132111,RORC,RORC	11095,-1060,4549
chr3:52708906-52709809	chr3	+	52709281	52709759	True	NM_014366,NM_018165,NM_181042	chr3,chr3,chr3	+,-,-	GNL3,PBRM1,PBRM1	10176,4030,4030
chr17:18624197-18625408	chr17	+	18624332	18625448	True	NM_001145045,NM_001037330	chr17,chr17	-,+	ZNF286B,TRIM16L	-38760,45
chr17:18624197-18625408	chr17	-	15546231	15547345	False	NM_006382,NM_001130842	chr17,chr17	-,+	CDRT1,ZNF286A	-23213,55545
chr11:8102014-8102367	chr11	+	8102098	8102225	True	NM_177972,NM_001135109	chr11,chr11	+,-	TUB,RIC3	683,88422
chr16:1992278-1992571	chr16	+	1992339	1992427	True	NM_016332,NM_004548	chr16,chr16	-,+	SEPX1,NDUFB10	917,17089
chr3:128837663-128838176	chr3	+	128837726	128838206	True	NM_198490,NM_001204888,NM_001204885,NM_001204884,NM_001204887,NM_001204886,NM_001204883,NM_000174	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,-,-,-,+	RAB43,RAB43,RAB43,RAB43,RAB43,RAB43,RAB43,GP9	2491,2491,2609,2701,2491,2491,2837,-58144
chr8:70734667-70735088	chr8	+	70734675	70734961	True	NM_001128206,NM_001146009	chr8,chr8	+,-	SULF1,SLCO5A1	-329706,10493
chr6:125607114-125608970	chr6	+	125607273	125608733	True	NM_016063,NM_001003395	chr6,chr6	-,+	HDDC2,TPD52L1	14599,-131904
chr17:33857288-33858947	chr17	+	33857630	33858992	True	NR_003037,NM_001129820	chr17,chr17	+,-	SNORD7,SLFN14	41683,26169
chr3:187453518-187453719	chr3	+	187453533	187453751	True	NM_001134738,NM_001130845,NM_001706,NR_034062	chr3,chr3,chr3,chr3	-,-,-,+	BCL6,BCL6,BCL6,LOC100131635	-838,584,9812,-33440
chr3:176909803-176910795	chr3	+	176910227	176910626	True	NM_024665,NM_181361	chr3,chr3	-,+	TBL1XR1,KCNMB2	4479,1343597
chr3:126295169-126297061	chr3	+	126295174	126296992	True	NM_152533,NM_152889	chr3,chr3	-,+	C3orf22,CHST13	-17416,-52057
chr12:123264880-123265952	chr12	+	123265247	123265919	True	NM_032554,NM_201435,NM_032573,NR_027918	chr12,chr12,chr12,chr12	-,+,+,+	GPR81,CCDC62,CCDC62,CCDC62	-50118,-6238,-6238,-6238
chr19:36068317-36068655	chr19	+	36068449	36068519	True	NM_000704,NM_032635	chr19,chr19	-,+	ATP4A,TMEM147	-13889,-31955
chr5:178978886-178979539	chr5	+	178979184	178979586	True	NM_005520,NM_025158,NM_001040451,NM_001040452	chr5,chr5,chr5,chr5	-,+,+,+	HNRNPH1,RUFY1,RUFY1,RUFY1	71186,-1666,7145,7145
chr4:183063202-183063457	chr4	+	183063213	183063503	True	NR_031640,NR_027107	chr4,chr4	+,-	MIR1305,MGC45800	26942,2215
chr19:49055825-49056268	chr19	+	49055904	49056304	True	NM_177973,NM_001080434	chr19,chr19	+,-	SULT2B1,LMTK3	-526,-39458
chr3:100212666-100212950	chr3	+	100212918	100212991	True	NM_014820,NM_018004	chr3,chr3	-,+	TOMM70A,TMEM45A	-92693,-1516
chr9:136282430-136282718	chr9	+	136282467	136282717	True	NR_024514,NM_139025,NM_139026,NM_139027,NM_020385	chr9,chr9,chr9,chr9,chr9	+,+,+,+,-	ADAMTS13,ADAMTS13,ADAMTS13,ADAMTS13,REXO4	-3065,4402,4402,4402,497
chr10:52633782-52634672	chr10	+	52633896	52634687	True	NM_001098512,NM_001198818	chr10,chr10	+,-	PRKG1,A1CF	116257,10798
chr11:508486-509494	chr11	+	509160	509490	True	NM_002939,NM_198075,NM_203389,NM_203388,NM_203387,NM_203386,NM_203385,NM_203384,NM_203383	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,+,-,-,-,-,-,-,-	RNH1,LRRC56,RNH1,RNH1,RNH1,RNH1,RNH1,RNH1,RNH1	-2339,28031,-1887,-1887,-1887,-1887,-2339,-2339,-2339
chr2:97932656-97932964	chr2	+	97932782	97932960	True	NM_199336,NM_001164315	chr2,chr2	-,+	FAHD2B,ANKRD36	-172200,-153600
chr2:97932656-97932964	chr2	-	98106317	98106495	False	NM_025190,NM_001862	chr2,chr2	-,+	ANKRD36B,COX5B	99983,156025
chr19:45997245-45997587	chr19	+	45997257	45997575	True	NM_005619,NM_001080401,NM_206900,NM_206901	chr19,chr19,chr19,chr19	-,+,-,-	RTN2,PPM1N,RTN2,RTN2	2786,4155,2788,-783
chr16:72094800-72096362	chr16	+	72095275	72096175	True	NM_020995,NM_001126102,NM_017853,NM_005143	chr16,chr16,chr16,chr16	+,+,-,+	HPR,HP,TXNL4B,HP	949,-6818,31414,-6818
chr10:82215335-82216254	chr10	+	82215619	82216187	True	NM_001128309,NM_030927,NM_138812	chr10,chr10,chr10	+,+,-	TSPAN14,TSPAN14,DYDC1	-1632,-1632,-99119
chr15:74986131-74986940	chr15	+	74986345	74986984	True	NM_001142443,NM_000761,NM_025083,NM_001142444	chr15,chr15,chr15,chr15	-,+,-,-	EDC3,CYP1A2,EDC3,EDC3	1454,54199,1454,1454
chr17:16743823-16744137	chr17	+	16743907	16744101	True	NR_026810,NR_029392	chr17,chr17	+,-	FAM106C,KRT16P2	-51901,-7760
chr17:16743823-16744137	chr17	-	18335269	18335463	False	NM_148918,NR_001443	chr17,chr17	-,+	SHMT1,LOC339240	-68413,-9825
chr17:16743823-16744137	chr17	+	20415571	20415765	False	NM_001190790,NR_029393	chr17,chr17	+,-	CDRT15L2,KRT16P3	67271,-7760
chr12:95611349-95611632	chr12	+	95611386	95611676	True	NM_017599,NM_018351	chr12,chr12	+,-	VEZT,FGD6	-37,-146
chr20:30540609-30541369	chr20	+	30540716	30541283	True	NM_030815,NM_001011718	chr20,chr20	-,+	PDRG1,XKR7	-833,14521
chr16:101875-102301	chr16	+	102033	102170	True	NM_016310,NM_024571	chr16,chr16	-,+	POLR3K,SNRNP25	1519,1658
chr3:39139660-39140187	chr3	+	39139688	39140150	True	NM_031899,NM_145755,NM_001105513	chr3,chr3,chr3	-,+,+	GORASP1,TTC21A,TTC21A	9030,9001,9001
chr17:74556986-74557394	chr17	+	74557070	74557402	True	NM_134268,NR_004396,NR_004397,NR_004395	chr17,chr17,chr17,chr17	-,+,+,+	CYGB,SNORD1B,SNORD1C,SNORD1A	-23288,7,-2254,312
chr6:151824234-151825966	chr6	+	151824498	151825885	True	NM_025059,NM_017909	chr6,chr6	+,-	C6orf97,RMND1	-9374,-51182
chr17:17479430-17479636	chr17	+	17479504	17479620	True	NM_007169,NM_018019,NM_148173	chr17,chr17,chr17	-,+,-	PEMT,MED9,PEMT	6175,-99255,1209
chr8:74888890-74889507	chr8	+	74888910	74889102	True	NM_001204858,NM_001204859,NM_001204857,NM_017866,NM_001204861,NR_033334,NM_001204863,NM_001204862,NM_005648,NM_001204860,NM_001204864,NM_001040613	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,+,-,+,-,-,-,-,-,+	TCEB1,TCEB1,TCEB1,TMEM70,TCEB1,TMEM70,TCEB1,TCEB1,TCEB1,TCEB1,TCEB1,TMEM70	-4388,-4388,-4388,-584,-4767,-584,-4388,-4767,-4388,-4388,-4388,-584
chr7:7742366-7744106	chr7	+	7742498	7744098	True	NR_034084,NM_002947	chr7,chr7	+,-	LOC729852,RPA3	-62207,14198
chr11:62571494-62572178	chr11	+	62571494	62572214	True	NM_199337,NM_006362,NM_001081491	chr11,chr11,chr11	+,-,-	TMEM179B,NXF1,NXF1	-16671,800,800
chr17:16117686-16118319	chr17	+	16117835	16118257	True	NM_006311,NM_004278	chr17,chr17	-,+	NCOR1,PIGL	667,2251
chr4:152197085-152199047	chr4	+	152197383	152198919	True	NM_183375,NM_001128923	chr4,chr4	+,-	PRSS48,SH3D19	-166,-49723
chr2:120278157-120279590	chr2	+	120278449	120279533	True	NM_001029996,NM_002980	chr2,chr2	+,-	PCDP1,SCTR	22491,2545
chr21:34639069-34639318	chr21	+	34639078	34639310	True	NM_000628,NR_024102	chr21,chr21	+,-	IL10RB,C21orf54	-457,-96537
chr21:45599156-45600357	chr21	+	45599199	45600374	True	NM_198155,NM_015259	chr21,chr21	+,-	C21orf33,ICOSLG	-45756,60510
chr17:39093717-39095239	chr17	+	39093776	39095038	True	NM_015515,NM_001195386	chr17,chr17	-,+	KRT23,TMEM99	60,-118398
chr15:41120200-41120650	chr15	+	41120299	41120603	True	NM_017726,NM_003710,NM_001130143	chr15,chr15,chr15	-,+,-	PPP1R14D,SPINT1,PPP1R14D	354,15642,354
chr15:27214803-27215446	chr15	+	27214862	27215128	True	NM_021912,NM_033223	chr15,chr15	-,+	GABRB3,GABRG3	-195927,1300
chr5:140794593-140794960	chr5	+	140794650	140794982	True	NM_032091,NM_032090,NM_032101,NM_032092,NM_005642,NM_018927,NM_018926,NM_032100,NM_018914,NM_018913	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,-,+,+,+,+,+	PCDHGA11,PCDHGA10,PCDHGB7,PCDHGA11,TAF7,PCDHGB7,PCDHGB6,PCDHGB6,PCDHGA11,PCDHGA10	5554,-1958,2231,5554,-94299,2277,-6931,-6931,5554,-1958
chr17:71087782-71087987	chr17	+	71087788	71088016	True	NM_001159770,NM_139177,NM_001050	chr17,chr17,chr17	-,-,+	SLC39A11,SLC39A11,SSTR2	887,887,73143
chr11:32112635-32112970	chr13	-	45965283	45965425	False	NM_001010875,NR_024458	chr13,chr13	-,+	SLC25A30,LOC100190939	27141,-49854
chr11:32112635-32112970	chr11	+	32112674	32112960	True	NM_001127612,NM_002901	chr11,chr11	-,+	PAX6,RCN1	-273165,-248
chr4:122744358-122744616	chr4	+	122744386	122744662	True	NM_005033,NM_001237	chr4,chr4	+,-	EXOSC9,CCNA2	-21965,476
chr9:94896828-94897060	chr1	+	202154624	202154682	False	NR_037664,NM_001017403	chr1,chr1	-,+	PTPN7,LGR6	-23908,8435
chr9:94896828-94897060	chr9	+	94896858	94897058	True	NR_015444,NM_178324,NR_027341	chr9,chr9,chr9	+,-,+	LOC100128076,SPTLC1,C9orf44	-1793,-19168,6690
chr22:47133319-47133603	chr22	+	47133420	47133604	True	NM_022766,NM_014346	chr22,chr22	-,+	CERK,TBC1D22A	598,24913
chr4:56259071-56260750	chr4	+	56259275	56260706	True	NM_018475,NR_037969	chr4,chr4	+,-	TMEM165,LOC100506462	1383,-7528
chr5:154319241-154320113	chr5	+	154319552	154319951	True	NM_001014990,NM_015465,NM_014180	chr5,chr5,chr5	+,-,+	MRPL22,GEMIN5,MRPL22	681,-1776,681
chr12:4429616-4429897	chr12	+	4429656	4429880	True	NM_020638,NM_020375	chr12,chr12	-,+	FGF23,C12orf5	59064,478
chr2:203498220-203499344	chr2	+	203498579	203499285	True	NM_178231,NM_173511	chr2,chr2	-,+	ICA1L,FAM117B	236960,615
chr1:102450249-102451612	chr1	+	102450508	102451163	True	NR_033424,NM_058170	chr1,chr1	+,-	DNAJA1P5,OLFM3	-113000,11690
chr13:52983634-52984635	chr13	+	52983917	52984446	True	NM_001098525,NM_199263,NM_018676	chr13,chr13,chr13	+,-,-	CKAP2,THSD1,THSD1	45048,-3288,-3288
chr10:43636824-43637818	chr10	+	43637104	43637624	True	NM_018590,NM_145313	chr10,chr10	+,-	CSGALNACT2,RASGEF1A	-3234,124803
chr12:28479703-28480002	chr12	+	28479703	28480039	True	NM_018318,NM_002820	chr12,chr12	+,-	CCDC91,PTHLH	-69621,-354787
chr5:118406363-118406633	chr5	+	118406370	118406592	True	NM_173666,NM_005509	chr5,chr5	-,+	DTWD2,DMXL1	-82130,491
chr12:111843072-111843380	chr12	+	111843129	111843399	True	NM_144671,NM_005475	chr12,chr12	-,+	FAM109A,SH2B3	-36204,352
chr19:15794467-15795541	chr19	+	15794569	15795569	True	NM_023944,NR_033864	chr19,chr19	+,-	CYP4F12,CYP4F24P	-10747,95287
chr4:15486600-15488426	chr4	+	15486599	15488465	True	NM_001193534,NM_001080522	chr4,chr4	-,+	FBXL5,CC2D2A	168625,-15161
chr1:20397198-20398089	chr1	+	20397197	20398127	True	NM_000929,NM_012400	chr1,chr1	+,-	PLA2G5,PLA2G2D	-547,47931
chr1:154840542-154841265	chr1	+	154840726	154841314	True	NM_001826,NM_001204087,NM_002249,NM_170782	chr1,chr1,chr1,chr1	+,-,-,-	CKS1B,KCNN3,KCNN3,KCNN3	105803,1490,1490,-8388
chr5:60688570-60689166	chr5	+	60688758	60689216	True	NM_001048249,NM_020928	chr5,chr5	-,+	C5orf43,ZSWIM6	-230456,-60719
chr2:153609313-153610508	chr2	+	153609346	153610206	True	NR_024526,NM_017892	chr2,chr2	+,-	ARL6IP6,PRPF40A	-34974,-35371
chr20:38714404-38715211	chr20	+	38714408	38715240	True	NM_003286,NM_005461	chr20,chr20	+,-	TOP1,MAFB	942221,602687
chr2:162273652-162274731	chr2	+	162273701	162274455	True	NM_006593,NM_001935	chr2,chr2	+,-	TBR1,DPP4	-1132,656647
chr11:8953706-8953927	chr11	+	8953845	8953923	True	NM_020643,NM_182901	chr11,chr11	-,+	C11orf16,C11orf17	680,-21094
chr2:233561870-233562091	chr2	+	233562002	233562124	True	NM_015575,NM_001172416,NM_001103146,NM_001103147,NM_001103148	chr2,chr2,chr2,chr2,chr2	+,-,+,+,+	GIGYF2,KCNJ13,GIGYF2,GIGYF2,GIGYF2	-38,79201,-38,-38,-38
chr17:48351881-48352566	chr17	+	48351945	48352615	True	NM_153229,NM_001168215,NM_000088	chr17,chr17,chr17	+,+,-	TMEM92,TMEM92,COL1A1	-208,-3229,-72945
chr12:9824109-9826062	chr12	+	9824113	9825939	True	NM_001197317,NM_172004,NM_001197318,NM_001197319,NM_013269,NR_036693,NM_001004419	chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,-,+,+,+,+,+	CLEC2D,CLECL1,CLEC2D,CLEC2D,CLEC2D,CLEC2D,CLEC2D	-1835,59974,-1858,-1835,-1858,-1858,-1857
chr15:22334891-22335805	chr15	+	22335322	22335818	True	NM_001004719,NR_028506	chr15,chr15	+,-	OR4M2,NF1P1	32659,-189520
chrY:7571823-7572772	chrY	+	7571955	7572615	True	NR_001552,NR_001551	chrY,chrY	-,+	TTTY16,TTTY12	-2667,100349
chr8:67345261-67345666	chr8	+	67345316	67345709	True	NM_001080416,NM_015169,NM_144650	chr8,chr8,chr8	-,+,+	MYBL1,RRS1,ADHFE1	179822,-4104,-649
chr7:74190451-74190838	chr7	+	74190585	74190751	True	NM_173537,NM_000265	chr7,chr7	-,+	GTF2IRD2,NCF1	77154,-2334
chr7:74190451-74190838	chr7	+	72636885	72637051	False	NR_002164,NR_003186	chr7,chr7	-,+	GTF2IRD2P1,NCF1B	48671,-2269
chr7:74190451-74190838	chr7	-	74585377	74585543	False	NM_001003795,NR_003187	chr7,chr7	+,-	GTF2IRD2B,NCF1C	-77095,2330
chr1:17637446-17638110	chr1	+	17637764	17638002	True	NM_001136204,NM_012387	chr1,chr1	-,+	RCC2,PADI4	127105,-3125
chr17:7657669-7658059	chr17	+	7657698	7658002	True	NR_002778,NM_001126114	chr17,chr17	+,-	RPL29P2,TP53	-111,-66835
chr3:80824527-80825734	chr3	+	80824876	80825595	True	NM_001128929,NM_000158	chr3,chr3	+,-	ROBO2,GBE1	-3677778,985412
chr16:22007569-22008693	chr16	+	22007744	22008724	True	NM_173806,NR_033694,NM_001164579	chr16,chr16,chr16	-,-,+	PDZD9,PDZD9,C16orf52	3757,3757,10731
chrX:19001709-19002027	chrX	+	19001728	19001904	True	NM_000292,NR_029379	chrX,chrX	-,+	PHKA2,LOC100132163	626,-93373
chr19:50887270-50887755	chr19	+	50887332	50887760	True	NM_007121,NM_002691,NM_004851	chr19,chr19,chr19	+,+,-	NR1H2,POLD1,NAPSA	-7698,-62,-18401
chr13:30867531-30867967	chr13	+	30867582	30867980	True	NM_005800,NM_001014380	chr13,chr13	+,-	USPL1,KATNAL1	323849,13233
chr5:176060970-176062084	chr5	+	176060991	176062021	True	NM_001099408,NM_003085,NR_036239,NM_001001502	chr5,chr5,chr5,chr5	+,-,-,-	EIF4E1B,SNCB,MIR4281,SNCB	-3360,-3434,-4490,-3434
chr14:105531503-105531853	chr14	+	105531557	105531623	True	NM_174891,NM_013345	chr14,chr14	+,-	C14orf79,GPR132	-78995,181
chr3:124300162-124300958	chr3	+	124300248	124300856	True	NM_007064,NM_002213	chr3,chr3	+,-	KALRN,ITGB5	2649,305338
chrX:71404266-71404916	chrX	+	71404277	71404702	True	NR_033187,NM_001170747,NM_006223,NM_001024455	chrX,chrX,chrX,chrX	+,+,+,-	PIN4,PIN4,PIN4,RGAG4	-2802,-2802,-2802,-52526
chr17:19398813-19399156	chr17	+	19398992	19399201	True	NM_002404,NM_018242	chr17,chr17	-,+	MFAP4,SLC47A1	-108460,37965
chr1:3687106-3687678	chr1	+	3687306	3687600	True	NR_033711,NM_001163724	chr1,chr1	-,+	KIAA0495,LOC388588	-23369,1751
chr5:35851341-35852284	chr5	+	35851373	35852105	True	NM_002185,NM_001042625	chr5,chr5	+,-	IL7R,CAPSL	4885,86682
chr16:3546171-3546374	chr16	+	3546197	3546415	True	NM_015041,NM_001080524	chr16,chr16	+,-	CLUAP1,C16orf90	4547,-776
chr11:43958374-43960275	chr11	+	43958497	43959999	True	NM_021926,NM_001145033	chr11,chr11	-,+	ALX4,C11orf96	371767,4106
chr5:68630040-68630458	chr5	+	68630128	68630392	True	NM_176816,NM_133343	chr5,chr5	-,+	CCDC125,RAD17	-13718,34731
chr5:68630040-68630458	chr1	+	15931492	15931562	False	NM_032341,NM_024758	chr1,chr1	+,-	DDI2,AGMAT	12390,-19887
chr6:24484530-24486056	chr6	+	24484756	24485426	True	NM_170740,NM_001503,NM_001080,NM_177483	chr6,chr6,chr6,chr6	+,-,+,-	ALDH5A1,GPLD1,ALDH5A1,GPLD1	9770,4474,9770,4423
chr9:96112164-96113744	chr9	+	96113161	96113231	True	NM_001098808,NM_014612	chr9,chr9	-,+	C9orf129,FAM120A	-4465,100941
chr15:34502362-34502578	chr15	+	34502400	34502570	True	NM_024713,NM_016454	chr15,chr15	-,+	C15orf29,TMEM85	-103,14674
chr15:64338945-64339634	chr15	+	64338945	64339657	True	NM_003099,NM_014326	chr15,chr15	+,-	SNX1,DAPK2	48519,-424
chr17:30440669-30442433	chr17	+	30440863	30442132	True	NM_001033566,NR_002222	chr17,chr17	+,-	RHOT1,ARGFXP2	27340,36508
chr4:74464328-74464944	chr4	+	74464327	74464918	True	NM_177532,NM_001133	chr4,chr4	-,+	RASSF6,AFM	21267,-116923
chr16:74702348-74703132	chr16	+	74702352	74703182	True	NM_018124,NM_032268	chr16,chr16	-,+	RFWD3,ZNRF1	-1573,329732
chr15:68574046-68575982	chr15	+	68574287	68575636	True	NM_017882,NM_015322	chr15,chr15	-,+	CLN6,FEM1B	-52207,-4209
chr8:140717764-140718022	chr8	+	140717865	140718071	True	NM_016601,NM_017444	chr8,chr8	-,+	KCNK9,CHRAC1	-2566,803329
chr5:140030995-140032621	chr5	+	140031367	140032594	True	NR_033697,NM_002488,NM_006083,NM_001185012,NR_037428	chr5,chr5,chr5,chr5,chr5	-,-,+,-,+	NDUFA2,NDUFA2,IK,NDUFA2,MIR3655	-3997,-3997,-4034,-3997,-3989
chr1:223901700-223903015	chr1	+	223901770	223902974	True	NM_001143962,NM_001748	chr1,chr1	-,+	CAPN8,CAPN2	-48334,-1703
chr15:52861271-52863015	chr15	+	52861498	52862395	True	NM_006628,NM_002748	chr15,chr15	-,+	ARPP19,MAPK6	-285,-550138
chr19:7969697-7969945	chr19	+	7969812	7969918	True	NM_206833,NM_145185	chr19,chr19	-,+	CTXN1,MAP2K7	21183,-1098
chr10:5144315-5144583	chr10	+	5144315	5144508	True	NM_003739,NR_027916	chr10,chr10	+,-	AKR1C3,AKR1CL1	-7806,82699
chr11:119017961-119019642	chr11	+	119018246	119019502	True	NM_022169,NM_001142505,NM_001382	chr11,chr11,chr11	+,+,-	ABCG4,ABCG4,DPAGT1	247,796,-45461
chr4:144480361-144480644	chr4	+	144480366	144480576	True	NM_001168235,NR_003675	chr4,chr4	-,+	FREM3,LOC441046	141302,48
chr6:160212709-160213994	chr6	+	160212963	160213613	True	NR_002965,NM_014161,NM_173516,NM_030752,NM_001008897	chr6,chr6,chr6,chr6,chr6	-,+,+,-,-	SNORA29,MRPL18,PNLDC1,TCP1,TCP1	-6198,-1522,7687,-2228,-2228
chr2:158711473-158711866	chr2	+	158711559	158711625	True	NM_001105,NM_001135098	chr2,chr2	-,+	ACVR1,UPP2	20054,140065
chr21:11096610-11097403	chr21	+	11096800	11097239	True	NR_037458,NM_181704,NM_001187,NM_182482,NM_182481,NM_182484	chr21,chr21,chr21,chr21,chr21,chr21	+,-,-,-,-,-	MIR3687,BAGE4,BAGE,BAGE2,BAGE3,BAGE5	-1270652,1749,1761,1749,1749,1749
chr11:66311021-66311290	chr11	+	66311172	66311338	True	NM_001104,NM_207340	chr11,chr11	+,-	ACTN3,ZDHHC24	3052,2383
chr1:853930-854527	chr1	+	853974	854552	True	NM_152486,NR_026874	chr1,chr1	+,-	SAMD11,FLJ39609	6568,315
chr14:103797743-103799329	chr14	+	103798064	103799142	True	NM_183004,NR_002964,NR_033938,NM_001969	chr14,chr14,chr14,chr14	+,+,-,+	EIF5,SNORA28,LOC100131366,EIF5	2093,5043,-142699,1350
chr22:35870409-35870990	chr22	+	35870504	35871037	True	NM_005368,NM_014310	chr22,chr22	-,+	MB,RASD2	142397,66314
chr12:6809735-6810040	chr12	+	6809775	6810089	True	NM_001164094,NM_153685	chr12,chr12	+,-	COPS7A,C12orf53	23060,31
chr5:173162410-173162652	chr5	+	173162412	173162668	True	NM_030627,NM_138369	chr5,chr5	+,-	CPEB4,BOD1	152662,-118746
chr6:139094947-139096167	chr6	+	139095020	139095954	True	NM_015439,NM_020464	chr6,chr6	+,-	CCDC28A,NHSL1	-414,-201352
chr6:157803226-157803469	chr6	+	157803240	157803434	True	NM_018452,NM_153746,NM_024630	chr6,chr6,chr6	-,+,+	C6orf35,ZDHHC14,ZDHHC14	-57987,-734,-734
chr10:134740530-134740805	chr10	+	134740719	134740805	True	NM_173572,NM_001083909	chr10,chr10	-,+	C10orf93,GPR123	15334,160603
chr4:178231180-178231479	chr4	+	178231322	178231498	True	NM_000027,NM_018248	chr4,chr4	-,+	AGA,NEIL3	132209,-382
chr11:118399480-118400557	chr11	+	118399681	118400326	True	NM_001144038,NM_001144035,NM_001144034,NM_001144037,NM_001144036,NM_001080441,NM_001168618,NM_032780	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,+,-,+	TMEM25,TMEM25,TMEM25,TMEM25,TMEM25,TTC36,IFT46,TMEM25	1476,1476,1476,1476,1476,-1530,36516,1476
chr19:12832754-12833123	chr19	+	12832766	12833172	True	NM_001136196,NM_001136195,NM_004317,NM_013433	chr19,chr19,chr19,chr19	-,-,+,-	TNPO2,TNPO2,ASNA1,TNPO2	340,1688,15133,-17
chr11:67372883-67373920	chr11	+	67372983	67373806	True	NM_007103,NR_033791,NM_001166102	chr11,chr11,chr11	+,-,+	NDUFV1,DOC2GP,NDUFV1	516,9379,516
chr7:45041194-45042765	chr7	+	45041203	45042664	True	NR_003697,NR_030770,NM_031443,NM_001167935,NM_001167934	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	C7orf40,CCM2,CCM2,CCM2,CCM2	-14944,-1909,-1467,-1467,-1467
chr18:49139781-49140494	chr18	+	49139885	49140409	True	NM_005359,NM_016626	chr18,chr18	+,-	SMAD4,MEX3C	-583364,-415834
chr1:26494408-26495926	chr1	+	26494459	26495823	True	NM_015871,NM_032588,NM_006314,NM_024869,NR_023345	chr1,chr1,chr1,chr1,chr1	+,-,+,+,+	ZNF593,TRIM63,CNKSR1,GRRP1,CNKSR1	564,-100338,8157,-8999,8158
chr13:91999797-92000052	chr13	+	91999898	92000024	True	NR_029490,NR_029492,NR_029508,NR_029489,NR_029488,NR_029487,NR_027039,NR_027349,NR_027350	chr13,chr13,chr13,chr13,chr13,chr13,chr13,chr13,chr13	+,+,+,+,+,+,-,+,+	MIR19B1,MIR20A,MIR92A1,MIR19A,MIR18A,MIR17,LOC144776,MIR17HG,MIR17HG	3421,3294,3543,3120,2980,2834,-421047,49,49
chr5:115299057-115299615	chr5	+	115299067	115299631	True	NR_033363,NM_173800	chr5,chr5	-,+	ATG12,AQPEP	-121519,-967
chr6:11042262-11043912	chr6	+	11042648	11043764	True	NM_017770,NM_001135575	chr6,chr6	-,+	ELOVL2,LOC221710	910,50501
chr19:36487011-36487356	chr19	+	36487202	36487404	True	NM_001039876,NM_001042631	chr19,chr19	-,+	C19orf46,SDHAF1	12318,-1168
chr17:48613510-48613877	chr17	+	48613596	48613858	True	NM_017957,NM_001267	chr17,chr17	+,-	EPN3,CHAD	-3608,-67369
chr16:17563002-17563298	chr16	+	17563006	17563214	True	NR_003569,NM_022166	chr16,chr16	+,-	ABCC6P1,XYLT1	1019355,1576
chr18:13140774-13141928	chr18	+	13140843	13141828	True	NM_002828,NM_181481	chr18,chr18	-,+	PTPN2,C18orf1	-256509,76957
chrX:153811790-153812474	chrX	+	153811791	153812344	True	NM_139250,NM_001327	chrX,chrX	+,+	CTAG1A,CTAG1B	1073,1073
chrX:153811790-153812474	chrX	-	153848595	153849148	False	NM_139250,NM_001327	chrX,chrX	-,-	CTAG1A,CTAG1B	-1073,-1073
chrX:118741289-118741682	chrX	+	118741288	118741481	True	NM_001173487,NM_181777,NM_017544	chrX,chrX,chrX	-,+,-	NKRF,UBE2A,NKRF	-1442,-27041,-1442
chr7:45198941-45199647	chr7	+	45199180	45199634	True	NM_199122,NM_005856	chr7,chr7	-,+	TBRG4,RAMP3	-47863,-1871
chr4:42154243-42154559	chr4	+	42154352	42154453	True	NM_207406,NM_006345,NM_001159547	chr4,chr4,chr4	-,+,-	BEND4,SLC30A9,BEND4	497,-161880,497
chrY:24444180-24444442	chrY	+	24444211	24444457	True	NR_001541,NR_002193	chrY,chrY	-,+	TTTY5,RBMY2FP	616,10548
chr21:35748439-35748644	chr21	+	35748443	35748681	True	NM_001127670,NM_058182	chr21,chr21	-,+	KCNE1,FAM165B	79432,-745
chr11:76433966-76434367	chr11	+	76434111	76434389	True	NM_015516,NR_024042	chr11,chr11	+,-	TSKU,GUCY2E	59895,-1278
chr17:26574595-26574871	chr17	+	26574604	26574880	True	NR_002181,NR_028334	chr17,chr17	+,-	PPY2,FLJ40504	-185,59578
chrX:52112671-52114492	chrX	+	52112772	52114457	True	NR_033251,NM_130777,NM_001079538	chrX,chrX,chrX	-,+,+	XAGE1C,XAGE2,XAGE2B	145756,-745,157
chrX:52112671-52114492	chrX	-	52384716	52386401	False	NM_130777,NM_001097592,NM_001079538	chrX,chrX,chrX	-,+,-	XAGE2,XAGE1A,XAGE2B	745,125359,-157
chr11:32454611-32454917	chr11	+	32454685	32454909	True	NM_001198552,NM_001198551,NM_024424,NR_023920,NM_000378,NM_024426	chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,+,-,-	WT1,WT1,WT1,WT1-AS,WT1,WT1	-2322,-2322,2222,2375,2222,2222
chr10:64562699-64563075	chr10	+	64562954	64563126	True	NM_000399,NM_032804	chr10,chr10	-,+	EGR2,ADO	13054,1389
chr7:91591012-91591945	chr7	+	91591211	91591959	True	NM_006980,NM_147185	chr7,chr7	-,+	MTERF,AKAP9	-81195,-21084
chr17:29232879-29233258	chr17	+	29232994	29233300	True	NM_024683,NM_018404	chr17,chr17	-,+	C17orf42,ADAP2	36,15453
chr10:12392576-12393136	chr10	+	12392618	12392988	True	NM_014142,NM_153498,NM_020397	chr10,chr10,chr10	-,+,+	NUDT5,CAMK1D,CAMK1D	-154475,-1086,-1086
chr16:2908013-2908254	chr16	+	2908125	2908185	True	NM_001142499,NM_022119	chr16,chr16	+,-	FLYWCH2,PRSS22	25010,36
chr11:6415209-6415460	chr11	+	6415229	6415499	True	NM_000543,NM_001164,NM_001007593	chr11,chr11,chr11	+,-,+	SMPD1,APBB1,SMPD1	-3636,24851,-3636
chr1:148188060-148189979	chr1	+	148188255	148188846	True	NM_001170755,NM_001164261	chr1,chr1	+,-	NBPF15,PPIAL4D	369341,13741
chr1:148188060-148189979	chr1	-	148655254	148655309	False	NM_001164262,NM_001144032	chr1,chr1	-,+	PPIAL4F,PPIAL4E	-452718,-11299
chr1:148188060-148189979	chr1	-	148817250	148817305	False	NM_001164262,NM_001024599	chr1,chr1	+,-	PPIAL4F,HIST2H2BF	-11291,581979
chr1:227506934-227508337	chr1	+	227507148	227508388	True	NM_014826,NM_178549,NM_003607	chr1,chr1,chr1	-,+,-	CDC42BPA,ZNF678,CDC42BPA	-1322,242831,-1322
chr7:6864489-6865028	chr7	+	6864651	6864873	True	NM_198097,NM_173565	chr7,chr7	-,+	C7orf28B,RSPH10B	1109,-70962
chr7:6864489-6865028	chr7	-	5939446	5939665	False	NM_001099697,NM_015622	chr7,chr7	-,+	RSPH10B2,CCZ1	70868,-1325
chr15:65321969-65322306	chr15	+	65322047	65322107	True	NM_178859,NM_139242	chr15,chr15	+,-	OSTBETA,MTFMT	15600,-70
chr15:65503827-65504135	chr15	+	65503870	65504008	True	NM_001101362,NM_003613	chr15,chr15	+,-	KBTBD13,CILP	-134767,-30
chr11:118661788-118662297	chr11	+	118661970	118662297	True	NM_001716,NM_004397	chr11,chr11	+,-	CXCR5,DDX6	92243,2
chr10:124323839-124325640	chr10	+	124324177	124325433	True	NM_017579,NM_001010912,NM_004406,NM_007329	chr10,chr10,chr10,chr10	+,-,+,+	DMBT1,C10orf120,DMBT1,DMBT1	-4059,133955,-4059,-4059
chr2:27506060-27506855	chr2	+	27506091	27506729	True	NM_003459,NM_173650,NM_187841,NM_032546	chr2,chr2,chr2,chr2	-,+,+,+	SLC30A3,DNAJC5G,TRIM54,TRIM54	-20131,-7853,-845,-845
chr1:187387814-187388243	chr1	+	187387931	187388161	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-738372,-589954
chr8:11840756-11841996	chr8	+	11840921	11842015	True	NM_001033017,NM_001033018	chr8,chr8	+,-	DEFB135,DEFB136	-1149,-8813
chr19:53769020-53770906	chr19	+	53769489	53770847	True	NM_173857,NM_173856	chr19,chr19	-,+	VN1R4,VN1R2	121,-7996
chr19:53769020-53770906	chr19	-	53818902	53818952	False	NM_138374,NM_033341	chr19,chr19	+,-	ZNF845,BIRC8	18049,-24027
chr10:118998718-118998923	chr10	+	118998771	118998919	True	NR_037436,NM_003054	chr10,chr10	-,+	MIR3663,SLC18A2	-71486,1664
chr13:37679519-37679747	chr13	+	37679522	37679680	True	NM_145203,NM_181503	chr13,chr13	-,+	CSNK1A1L,EXOSC8	171,-104895
chr9:116343242-116344530	chr9	+	116343725	116344549	True	NM_017443,NM_021106	chr9,chr9	-,+	POLE3,RGS3	-170696,-836
chr10:15129841-15130460	chr10	+	15130150	15130372	True	NM_183005,NM_001097590,NM_006414,NM_001039844,NM_153244	chr10,chr10,chr10,chr10,chr10	+,+,+,-,-	RPP38,RPP38,RPP38,ACBD7,C10orf111	8809,8809,8809,453,8996
chr15:65714506-65714960	chr15	+	65714514	65714940	True	NM_020962,NM_016395	chr15,chr15	-,+	IGDCC4,PTPLAD1	520,107886
chr14:75353735-75354396	chr14	+	75353742	75354415	True	NR_033814,NM_001080408,NM_001933	chr14,chr14,chr14	+,-,+	DLST,PROX2,DLST	-5210,-23205,-5210
chr8:38458720-38459224	chr8	+	38458786	38459110	True	NR_003129,NM_001146216	chr8,chr8	-,+	RNF5P1,TACC1	-11,126593
chr11:65189462-65189716	chr11	+	65189565	65189765	True	NR_028272,NM_182556	chr11,chr11	+,-	NEAT1,SLC25A45	503,-39423
chr17:80376709-80378534	chr17	+	80376788	80378172	True	NM_173620,NM_175902,NR_033265,NM_024648	chr17,chr17,chr17,chr17	+,-,-,-	HEXDC,C17orf101,C17orf101,C17orf101	-589,-275,-275,-275
chr4:41983714-41984180	chr4	+	41983718	41984168	True	NM_006345,NM_001159547,NM_001029955	chr4,chr4,chr4	+,-,+	SLC30A9,BEND4,DCAF4L1	8354,170777,-56
chr5:37249677-37250673	chr5	+	37249698	37250606	True	NM_018034,NM_023073	chr5,chr5	+,-	WDR70,C5orf42	128805,-168
chr5:60130269-60130871	chr5	+	60130518	60130746	True	NM_001104558,NM_024930,NM_174889	chr5,chr5,chr5	-,-,+	ELOVL7,ELOVL7,NDUFAF2	9406,9406,110209
chr20:19994926-19996770	chr20	+	19995210	19996645	True	NM_181527,NM_181528,NM_016100,NM_016652	chr20,chr20,chr20,chr20	+,+,+,-	NAA20,NAA20,NAA20,CRNKL1	1897,1291,1291,40108
chr19:58280577-58280985	chr19	+	58280703	58280985	True	NM_017652,NM_001077426,NM_001204814,NM_024833	chr19,chr19,chr19,chr19	+,+,+,-	ZNF586,ZNF586,ZNF586,ZNF671	34,34,34,-41708
chr14:69946280-69947075	chr14	+	69946425	69946859	True	NM_004450,NM_001161498	chr14,chr14	-,+	ERH,UPF0639	-81404,4611
chr20:362100-362363	chr20	+	362254	362338	True	NM_021158,NM_144628	chr20,chr20	+,-	TRIB3,TBC1D20	-997,80899
chr21:30672493-30673731	chr21	+	30672497	30673746	True	NR_027655,NM_206866,NM_006585,NM_001186	chr21,chr21,chr21,chr21	+,+,-,+	BACH1,BACH1,CCT8,BACH1	3813,-811,-226487,-1328
chr9:99052159-99053106	chr9	+	99052246	99052827	True	NM_014282,NM_000197	chr9,chr9	+,-	HABP4,HSD17B3	159586,11669
chr3:148417256-148417726	chr3	+	148417332	148417760	True	NM_000685,NM_031850,NM_009585,NM_003071,NM_004835	chr3,chr3,chr3,chr3,chr3	+,+,+,-,+	AGTR1,AGTR1,AGTR1,HLTF,AGTR1	-1732,-1732,-1732,386632,-1732
chr8:9988969-9990306	chr8	+	9989016	9990226	True	NM_001199729,NR_029668	chr8,chr8	+,-	MSRA,MIR124-1	-36001,-228034
chr13:77903369-77903596	chr13	+	77903380	77903554	True	NM_015057,NM_001160706	chr13,chr13	-,+	MYCBP2,SCEL	-2203,206254
chr17:78012345-78012913	chr17	+	78012763	78012852	True	NM_017950,NM_019020	chr17,chr17	+,-	CCDC40,TBC1D16	-2379,-3116
chr6:116989727-116989986	chr6	+	116989843	116990009	True	NM_145062,NM_002269	chr6,chr6	-,+	ZUFSP,KPNA5	14,12357
chr3:126075279-126075536	chr3	+	126075318	126075536	True	NM_182628,NM_014079	chr3,chr3	+,-	CCDC37,KLF15	38245,750
chr16:19728828-19729173	chr16	+	19728882	19729084	True	NM_153208,NM_001012991	chr16,chr16	+,-	IQCK,C16orf88	-1156,458
chr8:18641430-18643100	chr8	+	18641851	18643070	True	NM_000015,NM_206909	chr8,chr8	+,-	NAT2,PSD3	-393148,23388
chr21:37690684-37691005	chr21	+	37690849	37690909	True	NM_012130,NM_015358	chr21,chr21	-,+	CLDN14,MORC3	147866,1577
chr1:120905342-120906045	chr1	+	120905741	120906015	True	NR_027337,NM_001004340	chr1,chr1	+,-	HIST2H2BA,FCGR1B	18,29979
chr1:120905342-120906045	chr1	-	149783905	149783955	False	NM_001024599,NM_001161334,NM_001123375,NM_001034077	chr1,chr1,chr1,chr1	-,-,-,+	HIST2H2BF,HIST2H2BF,HIST2H3D,HIST2H4B	23,23,1331,20265
chr1:120905342-120906045	chr1	-	149399206	149399312	False	NR_027484,NM_001024599	chr1,chr1	+,-	FCGR1C,HIST2H2BF	-29963,23
chr15:34638802-34639752	chr15	+	34639103	34639341	True	NM_018648,NM_001042496,NM_175741,NM_001042495,NM_001042494	chr15,chr15,chr15,chr15,chr15	-,-,+,-,-	NOP10,SLC12A6,C15orf55,SLC12A6,SLC12A6	-3741,-9142,-1088,-8838,-9142
chr3:107909143-107910941	chr3	+	107909553	107910802	True	NM_018010,NM_007072	chr3,chr3	-,+	IFT57,HHLA2	30678,110529
chr9:120172558-120174322	chr9	+	120172729	120174160	True	NM_138554,NM_014010	chr9,chr9	+,-	TLR4,ASTN2	292299,3207
chrX:48939495-48940623	chrX	+	48939715	48940290	True	NM_007213,NM_001163323,NM_001029896	chrX,chrX,chrX	-,+,-	PRAF2,CCDC120,WDR45	-8053,-23244,-2151
chr19:49467026-49467237	chr19	+	49467060	49467230	True	NM_000146,NM_004324,NM_138764,NM_001161587,NM_138763,NM_138761,NR_027882	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,-,+,+,+	FTL,BAX,BAX,GYS1,BAX,BAX,BAX	1335,-8994,-8994,29430,-8994,-8994,-8994
chrX:133508608-133509663	chrX	+	133508657	133509725	True	NM_032458,NM_001015877,NM_032335,NR_030587	chrX,chrX,chrX,chrX	+,+,+,-	PHF6,PHF6,PHF6,MIR450B	-1366,-1366,-1366,164630
chr4:20826157-20827917	chr4	+	20826661	20827932	True	NM_147181,NM_145048	chr4,chr4	-,+	KCNIP4,PACRGL	24410,-124683
chr16:75239549-75239770	chr16	+	75239629	75239749	True	NM_001025200,NM_001906	chr16,chr16	-,+	CTRB2,CTRB1	1373,13134
chr16:75239549-75239770	chr16	-	75257007	75257127	False	NM_001025200,NM_001906,NM_001170721	chr16,chr16,chr16	-,+,-	CTRB2,CTRB1,BCAR1	-15935,-4174,15903
chr2:201983783-201984231	chr2	+	201983875	201984265	True	NM_173822,NM_001202517,NM_001202516,NM_001202519,NM_001127183,NM_001127184,NM_003879	chr2,chr2,chr2,chr2,chr2,chr2,chr2	-,+,+,+,+,+,+	FAM126B,CFLAR,CFLAR,CFLAR,CFLAR,CFLAR,CFLAR	-47483,-3055,-3055,-3055,-663,-3055,-3055
chr2:55641060-55642125	chr2	+	55641203	55641818	True	NM_080667,NM_001135597,NM_018084	chr2,chr2,chr2	+,-,-	CCDC104,CCDC88A,CCDC88A	104921,5291,5291
chr9:73445066-73445789	chr9	+	73445251	73445834	True	NR_029621,NM_015110	chr9,chr9	-,+	MIR204,SMC5	-20251,-571424
chr19:37406590-37406857	chr19	+	37406813	37406895	True	NM_001037232,NM_001171979,NM_001204838,NM_001204839,NM_198539,NM_001204835,NM_001204836,NM_001204837	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,+,+,+,+,+,+	ZNF829,ZNF829,ZNF568,ZNF568,ZNF568,ZNF568,ZNF568,ZNF568	348,78,335,335,335,335,335,335
chr7:141485395-141487019	chr7	+	141485550	141486753	True	NR_015392,NM_018980,NM_016944	chr7,chr7,chr7	-,+,+	FLJ40852,TAS2R5,TAS2R4	-47520,3263,-7312
chr6:73368467-73370337	chr6	+	73368713	73370367	True	NR_036244,NM_019842	chr6,chr6	-,+	MIR4282,KCNQ5	307159,-37203
chr1:36945035-36946868	chr1	+	36945095	36946655	True	NM_000760,NM_024676,NM_172313,NM_156039	chr1,chr1,chr1,chr1	-,+,-,-	CSF3R,SH3D21,CSF3R,CSF3R	2310,-172439,2310,2310
chr17:16742710-16743165	chr17	+	16742925	16743073	True	NR_026810,NR_029392	chr17,chr17	+,-	FAM106C,KRT16P2	-50919,-6778
chr17:16742710-16743165	chr17	-	18336297	18336347	False	NM_148918,NR_001443	chr17,chr17	-,+	SHMT1,LOC339240	-69441,-10853
chr17:16742710-16743165	chr17	+	20414687	20414737	False	NM_001190790,NR_029393	chr17,chr17	+,-	CDRT15L2,KRT16P3	68299,-6876
chr3:57115420-57116064	chr3	+	57115419	57115784	True	NM_181727,NM_001128615	chr3,chr3	+,-	SPATA12,ARHGEF3	-21010,-2083
chr13:51710728-51711004	chr13	+	51710750	51711020	True	NR_003923,NM_145019	chr13,chr13	-,+	GUCY1B2,FAM124A	-70457,85486
chr10:62705127-62705478	chr10	+	62705126	62705525	True	NM_033379,NR_024556,NM_014836	chr10,chr10,chr10	+,-,-	CDK1,RHOBTB1,RHOBTB1	-166965,-1093,-1093
chr1:57045159-57045449	chr1	+	57045209	57045337	True	NM_003713,NM_006252	chr1,chr1	-,+	PPAP2B,PRKAA2	-28,65652
chr4:185719188-185719762	chr4	+	185719212	185719621	True	NR_003542,NM_152683	chr4,chr4	-,+	SLED1,CCDC111	630,-148504
chr17:28257466-28257690	chr17	+	28257574	28257680	True	NM_033389,NM_001145053	chr17,chr17	-,+	SSH2,EFCAB5	-556,-751
chr10:115803928-115804553	chr10	+	115804071	115804595	True	NM_000684,NR_031747	chr10,chr10	+,-	ADRB1,MIR2110	-316,129393
chr2:209111589-209113149	chr2	+	209111698	209113149	True	NM_005896,NM_001178000	chr2,chr2	-,+	IDH1,PIKFYVE	6707,17841
chr6:89850246-89851613	chr6	+	89850326	89851434	True	NM_001010853,NM_080743	chr6,chr6	+,-	PM20D2,SRSF12	4334,-22526
chr3:127636433-127637737	chr3	+	127636464	127637641	True	NM_001003794,NM_207335	chr3,chr3	-,+	MGLL,KBTBD12	-94413,4260
chr2:43059569-43060169	chr2	+	43059686	43060150	True	NM_020744,NM_012205	chr2,chr2	+,-	MTA3,HAAO	-264073,-39935
chrX:119602999-119603258	chrX	+	119603063	119603243	True	NM_013995,NM_002294,NM_001122606,NM_012069	chrX,chrX,chrX,chrX	-,-,-,+	LAMP2,LAMP2,LAMP2,ATP1B4	11,11,11,-107174
chr14:21909970-21910347	chr14	+	21910083	21910253	True	NM_020920,NM_014828	chr14,chr14	-,+	CHD8,TOX4	-4626,35081
chr11:10878937-10879183	chr11	+	10878949	10879183	True	NM_001143667,NR_034137,NM_021211	chr11,chr11,chr11	-,+,-	ZBED5,LOC729013,ZBED5	487,580,487
chr4:57254367-57254752	chr4	+	57254416	57254784	True	NM_006452,NM_181806	chr4,chr4	+,-	PAICS,AASDH	47130,-778
chr5:137802355-137802639	chr5	+	137802364	137802648	True	NM_004730,NM_001964	chr5,chr5	-,+	ETF1,EGR1	76334,-1234
chr8:124254501-124254727	chr8	+	124254560	124254774	True	NM_032847,NM_207006	chr8,chr8	-,+	C8orf76,FAM83A	-922,-59864
chr15:100216167-100216868	chr15	+	100216466	100216783	True	NM_001130928,NM_152449	chr15,chr15	+,-	MEF2A,LYSMD4	-43339,56905
chr6:28367536-28367862	chr6	+	28367618	28367824	True	NM_024493,NM_001163391,NR_028077	chr6,chr6,chr6	+,-,-	ZKSCAN3,ZSCAN12,ZSCAN12	-49978,-74,-74
chr2:54016453-54017010	chr2	+	54016651	54016882	True	NM_001127398,NM_145863,NM_016115,NM_001127397,NM_015701,NM_001201965	chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,+,+,-	ERLEC1,ASB3,ASB3,ERLEC1,ERLEC1,ASB3	-2634,-2505,-2505,-2634,-2634,-2666
chr2:10218179-10218908	chr2	+	10218406	10218834	True	NM_001177718,NM_001037160	chr2,chr2	+,-	KLF11,CYS1	-34085,1754
chr1:94344752-94345042	chr1	+	94344766	94345090	True	NM_014597,NR_030621	chr1,chr1	-,+	DNTTIP2,MIR760	-4,-32429
chr7:73667238-73668356	chr7	+	73667328	73667766	True	NM_181471,NM_003388,NM_002914	chr7,chr7,chr7	-,+,-	RFC2,CLIP2,RFC2	1022,36038,1022
chr17:73005914-73006587	chr17	+	73006088	73006163	True	NM_001545,NM_001003785	chr17,chr17	+,-	ICT1,ATP5H	2616,36968
chr5:139780995-139781533	chr5	+	139781045	139781565	True	NM_024668,NM_017747,NM_020690,NM_017978,NM_001945,NM_001197030	chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,-,+	ANKHD1,ANKHD1,ANKHD1-EIF4EBP3,ANKHD1,HBEGF,ANKHD1	-167,-167,-167,-167,-54857,-167
chr19:12203059-12203347	chr19	+	12203092	12203256	True	NM_001080404,NR_027049	chr19,chr19	-,+	ZNF878,ZNF788	-35965,-65
chr11:62423637-62423842	chr11	+	62423730	62423799	True	NR_004390,NM_198334,NM_030628,NM_198335,NM_001043229	chr11,chr11,chr11,chr11,chr11	+,-,-,-,+	SNORA57,GANAB,INTS5,GANAB,METTL12	9094,-9626,-2956,-9626,8979
chr3:142340911-142341146	chr3	+	142340918	142341186	True	NM_001184,NM_002670	chr3,chr3	-,+	ATR,PLS1	-43250,1079
chr6:110012751-110013945	chr6	+	110012884	110013698	True	NM_145025,NM_001145128,NM_014845	chr6,chr6,chr6	-,-,+	AKD1,AKD1,FIG4	-469,-469,-511
chr2:100937092-100937399	chr2	+	100937135	100937429	True	NM_198461,NM_001011717	chr2,chr2	-,+	LONRF2,NMS	1816,149514
chr4:75856821-75857875	chr4	+	75857059	75857925	True	NM_001729,NM_015393	chr4,chr4	-,+	BTC,PARM1	-137177,359
chr1:161184973-161185541	chr1	+	161185073	161185366	True	NM_004106,NM_001643	chr1,chr1	+,-	FCER1G,APOA2	-37,8103
chr2:176048623-176049228	chr2	+	176048632	176049266	True	NM_024583,NM_001689,NM_001002258,NM_001190329	chr2,chr2,chr2,chr2	+,-,-,-	SCRN3,ATP5G3,ATP5G3,ATP5G3	-788233,-2142,-2241,-2142
chr9:32502705-32504396	chr9	+	32503061	32504370	True	NM_014314,NR_033991	chr9,chr9	-,+	DDX58,LOC100129250	22003,46771
chr10:104178829-104179200	chr10	+	104178920	104179156	True	NM_002779,NM_024326	chr10,chr10	-,+	PSD,FBXL15	-19,414
chr11:67483507-67484077	chr7	+	6899718	6899768	True	NM_198097,NM_173565	chr7,chr7	-,+	C7orf28B,RSPH10B	-33792,-106029
chr16:56455148-56456376	chr16	+	56455332	56456172	True	NM_018233,NM_001144	chr16,chr16	+,-	OGFOD1,AMFR	29251,3329
chr3:196294730-196295188	chr3	+	196294855	196295125	True	NM_001105573,NM_182627	chr3,chr3	+,-	FBXO45,WDR53	599,338
chr14:50152558-50154238	chr14	+	50152693	50154223	True	NM_172193,NM_001197330,NM_001197331,NM_002692	chr14,chr14,chr14,chr14	+,-,-,-	KLHDC1,POLE2,POLE2,POLE2	5599,925,925,925
chr16:30024234-30024709	chr16	+	30024340	30024400	True	NM_003586,NM_001109659	chr16,chr16	-,+	DOC2A,C16orf92	-1939,10254
chr3:40428767-40429111	chr3	+	40428829	40429025	True	NM_001248,NR_033965	chr3,chr3	+,-	ENTPD3,FLJ33065	-208,-77640
chr4:91273397-91274963	chr4	+	91274061	91274963	True	NM_183049,NM_207491	chr4,chr4	-,+	TMSL3,FAM190A	485356,-117943
chr1:211505166-211506621	chr1	+	211505298	211506438	True	NM_001033910,NM_001164688,NM_004619	chr1,chr1,chr1	+,-,+	TRAF5,RD3,TRAF5	-5201,159871,-5392
chr10:18637972-18638270	chr10	+	18638091	18638314	True	NM_182543,NM_201590	chr10,chr10	-,+	NSUN6,CACNB2	302286,-8528
chr19:41769774-41770019	chr19	+	41769805	41770045	True	NM_144732,NM_007040,NM_000660	chr19,chr19,chr19	+,+,-	HNRNPUL1,HNRNPUL1,TGFB1	-1465,74,89836
chr5:140684511-140684916	chr5	+	140684552	140684872	True	NM_031947,NM_031993	chr5,chr5	-,+	SLC25A2,PCDHGA1	-940,25379
chr1:193036608-193038285	chr1	+	193036736	193038314	True	NM_001173525,NM_001173524,NM_001199262,NM_001199263,NM_001199261,NM_015984,NR_033393,NM_004600,NM_001042369,NM_001042370	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,-,-,-,+,+,+,+	TROVE2,TROVE2,UCHL5,UCHL5,UCHL5,UCHL5,TROVE2,TROVE2,TROVE2,TROVE2	-7784,-8236,-8213,-8213,-8213,-8213,-8236,-7784,-7784,-7784
chr11:62429514-62429922	chr11	+	62429607	62429891	True	NM_001085372,NR_004390,NM_024099,NM_030628,NM_001043229	chr11,chr11,chr11,chr11,chr11	+,+,-,-,+	C11orf83,SNORA57,C11orf48,INTS5,METTL12	9234,3002,9402,-8833,2887
chr2:171070070-171070465	chr2	+	171070144	171070480	True	NM_138995,NM_014168	chr2,chr2	+,-	MYO3B,METTL5	-35554,-388791
chr19:8674911-8675355	chr19	+	8674994	8675404	True	NM_030957,NM_031203	chr19,chr19	-,+	ADAMTS10,HNRNPM	234,-165242
chr4:123538488-123538731	chr4	+	123538534	123538744	True	NM_001178007,NM_021803	chr4,chr4	+,-	BBS12,IL21	115112,3517
chr8:9760774-9761139	chr8	+	9760901	9760991	True	NR_024281,NM_001135670,NR_029668	chr8,chr8,chr8	-,+,-	LOC157627,MSRA,MIR124-1	-62,150838,41
chr17:67252243-67252755	chr17	+	67252266	67252578	True	NM_080282,NM_002758	chr17,chr17	-,+	ABCA10,MAP2K6	-11310,158259
chr11:123398197-123399393	chr11	+	123398212	123399393	True	NM_020716,NM_001040151	chr11,chr11	+,-	GRAMD1B,SCN3B	-1735,125973
chr2:217723796-217724792	chr2	+	217723810	217724778	True	NM_003284,NM_000597	chr2,chr2	-,+	TNP1,IGFBP2	54,-225746
chr1:150574465-150575157	chr1	+	150574819	150574893	True	NM_182763,NR_036211	chr1,chr1	-,+	MCL1,MIR4257	-22605,-50469
chr2:169313612-169314382	chr2	+	169313680	169314425	True	NM_203463,NM_013233	chr2,chr2	+,-	LASS6,STK39	-896,-209575
chr9:23826340-23826741	chr9	+	23826345	23826782	True	NM_022160,NM_004432,NM_001171197,NM_001171195	chr9,chr9,chr9,chr9	+,-,-,-	DMRTA1,ELAVL2,ELAVL2,ELAVL2	-1379556,-282,-4867,-4502
chr14:25516431-25518110	chr14	+	25516694	25518092	True	NM_015299,NM_014178	chr14,chr14	+,-	KHNYN,STXBP6	-617604,1053
chr1:247746178-247747759	chr1	+	247746284	247747804	True	NM_001001915,NM_198074	chr1,chr1	+,-	OR2G2,OR2C3	3857,-49143
chr9:90113814-90114035	chr9	+	90113965	90114061	True	NR_036691,NM_004938	chr9,chr9	-,+	LOC494127,DAPK1	-413825,-1260
chr8:142429203-142429667	chr8	+	142429267	142429649	True	NM_005293,NM_007079,NM_032611	chr8,chr8,chr8	-,+,+	GPR20,PTP4A3,PTP4A3	-51902,2357,2357
chr6:32485394-32486361	chr6	+	32485537	32486335	True	NM_002125,NM_019111	chr6,chr6	-,+	HLA-DRB5,HLA-DRA	11721,-77971
chr11:60694976-60695213	chr11	+	60695006	60695200	True	NM_014502,NM_017870,NM_178031	chr11,chr11,chr11	-,+,+	PRPF19,TMEM132A,TMEM132A	-20945,-3144,-3144
chrY:25341327-25341826	chrY	+	25341487	25341831	True	NM_020364,NM_020420,NM_001005375,NM_004081	chrY,chrY,chrY,chrY	+,-,-,-	DAZ3,DAZ4,DAZ4,DAZ1	23749,3477,3477,3462
chrY:25341327-25341826	chrY	-	25369003	25369347	False	NM_020364,NM_020420,NM_001005786,NM_001005785,NM_020363	chrY,chrY,chrY,chrY,chrY	+,+,+,+,+	DAZ3,DAZ4,DAZ2,DAZ2,DAZ2	-3477,-3477,-3454,-3454,-3454
chrY:25341327-25341826	chrY	-	26983389	26983733	False	NM_020364,NM_020420,NM_001005375,NM_001005786,NM_001005785	chrY,chrY,chrY,chrY,chrY	+,+,+,+,+	DAZ3,DAZ4,DAZ4,DAZ2,DAZ2	-3477,-3477,-3477,-3454,-3454
chrY:25341327-25341826	chrY	+	26955872	26956216	False	NM_020364,NM_001005375,NM_020420	chrY,chrY,chrY	-,+,-	DAZ3,DAZ4,DAZ4	3477,23750,3477
chr2:216943093-216944181	chr2	+	216943420	216943977	True	NM_018441,NM_138390,NM_001142312,NM_001142310,NM_001142311	chr2,chr2,chr2,chr2,chr2	-,+,+,+,+	PECR,TMEM169,TMEM169,TMEM169,TMEM169	2622,2611,2611,2611,2611
chr3:42632978-42633352	chr3	+	42633050	42633300	True	NM_005385,NM_004206,NM_001201572,NM_016305,NM_032970,NM_001201584	chr3,chr3,chr3,chr3,chr3,chr3	+,-,-,+,-,-	NKTR,SEC22C,SEC22C,SS18L2,SEC22C,SEC22C	8846,-9530,9322,-803,-9530,-9530
chr7:6793341-6793622	chr7	+	6793420	6793596	True	NM_173565,NM_016265,NM_001099697	chr7,chr7,chr7	+,-,+	RSPH10B,ZNF12,RSPH10B2	143,-46854,143
chr7:6793341-6793622	chr7	-	6010457	6010633	False	NM_006303,NM_173565,NM_001099697	chr7,chr7,chr7	+,-,-	AIMP2,RSPH10B,RSPH10B2	38248,-143,-143
chr14:68137536-68139318	chr14	+	68137552	68138616	True	NM_006370,NM_152443	chr14,chr14	-,+	VTI1B,RDH12	3036,29986
chr4:39633201-39634022	chr4	+	39633305	39633837	True	NM_174921,NM_001111112	chr4,chr4	-,+	C4orf34,UBE2K	6694,65826
chr14:73600704-73600993	chr14	+	73600727	73600814	True	NM_007318,NM_000021,NM_021260	chr14,chr14,chr14	+,+,-	PSEN1,PSEN1,ZFYVE1	2328,2328,-106807
chr19:39342964-39343404	chr19	+	39343129	39343358	True	NM_001001716,NM_001533,NM_001005335	chr19,chr19,chr19	+,-,-	NFKBIB,HNRNPL,HNRNPL	47256,-2512,-150
chr16:2067652-2068367	chr16	+	2067990	2068174	True	NM_001130012,NM_178167,NM_001099456,NM_004785	chr16,chr16,chr16,chr16	+,-,+,+	SLC9A3R2,ZNF598,NPW,SLC9A3R2	8713,-8227,1346,8713
chr4:13548811-13549011	chr4	+	13548836	13549036	True	NR_015450,NM_001189,NR_003132	chr4,chr4,chr4	-,-,+	LOC285548,NKX3-2,HSP90AB2P	462,-2722,-213850
chr19:6669993-6670247	chr19	+	6670000	6670206	True	NM_003807,NM_172014,NM_004240	chr19,chr19,chr19	-,-,+	TNFSF14,TNFSF14,TRIP10	443,443,69500
chr9:35117415-35118238	chr9	+	35117416	35117716	True	NM_006377,NM_025182	chr9,chr9	+,-	UNC13B,KIAA1539	44272,-1523
chr11:107434868-107436001	chr11	+	107434972	107436015	True	NM_138775,NM_001130037	chr11,chr11	-,+	ALKBH8,ELMOD1	496,25801
chr2:127415588-127416635	chr2	+	127415623	127416659	True	NM_002101,NM_016815,NM_139348	chr2,chr2,chr2	+,+,-	GYPC,GYPC,BIN1	-1990,-1990,448255
chr15:45928124-45929916	chr15	+	45928905	45929953	True	NM_021199,NM_013309	chr15,chr15	+,-	SQRDL,SLC30A4	-1712,-113903
chr12:65682005-65682994	chr12	+	65682208	65682859	True	NM_007191,NM_001031679,NM_198080,NM_001193460,NM_001193461	chr12,chr12,chr12,chr12,chr12	-,+,+,+,+	WIF1,MSRB3,MSRB3,MSRB3,MSRB3	-166862,-9850,-9850,-9850,-9506
chr15:34661263-34661734	chr15	+	34661472	34661557	True	NM_175741,NM_153613	chr15,chr15	+,-	C15orf55,LPCAT4	-23457,-2077
chr17:17478996-17479430	chr17	+	17479114	17479342	True	NM_007169,NM_018019,NM_148173	chr17,chr17,chr17	-,+,-	PEMT,MED9,PEMT	6453,-98865,1487
chr20:592742-592955	chr20	+	592779	592981	True	NM_004609,NM_031229	chr20,chr20	-,+	TCF15,RBCK1	-1869,-204127
chr1:226071256-226071857	chr1	+	226071655	226071899	True	NM_020997,NM_000120,NM_014698	chr1,chr1,chr1	-,+,-	LEFTY1,EPHX1,TMEM63A	4997,-58704,-1235
chr10:99330176-99330445	chr10	+	99330184	99330464	True	NM_178832,NM_001129981,NM_020349	chr10,chr10,chr10	-,+,+	MORN4,ANKRD2,ANKRD2	62930,1791,1791
chrX:50024478-50024928	chrX	+	50024529	50024906	True	NM_003886,NM_033031,NM_033670	chrX,chrX,chrX	-,+,+	AKAP4,CCNB3,CCNB3	-58865,2633,2633
chr10:50969748-50969949	chr10	+	50969822	50969896	True	NM_001143997,NM_001143996,NM_182554,NM_018245	chr10,chr10,chr10,chr10	-,-,+,-	OGDHL,OGDHL,C10orf53,OGDHL	579,579,-82189,579
chr3:48754858-48756314	chr3	+	48754956	48756220	True	NM_001005910,NM_001005911,NR_027437,NR_027438,NM_001146178,NM_001146179,NM_006321,NM_001190317,NM_001190316,NM_001005909,NM_016291	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,-,-,+,-,-,-,-	IP6K2,IP6K2,IP6K2,IP6K2,IP6K2,IP6K2,ARIH2,IP6K2,IP6K2,IP6K2,IP6K2	-245,-245,-245,-245,-245,-245,200060,-245,-245,-245,-245
chr12:58212444-58213257	chr12	+	58212503	58212919	True	NR_029847,NM_001172697,NM_006576	chr12,chr12,chr12	-,+,-	MIR26A2,TSFM,AVIL	5606,-36026,-2651
chr22:45706724-45707240	chr22	+	45706815	45707237	True	NM_017911,NM_001009880,NM_001104595	chr22,chr22,chr22	+,-,+	FAM118A,KIAA0930,FAM118A	-1081,-70165,-1785
chr8:27348919-27349703	chr8	+	27348962	27349742	True	NM_001979,NM_000742	chr8,chr8	+,-	EPHX2,CHRNA2	-368,-12149
chr1:31985939-31987570	chr1	+	31986346	31987620	True	NR_033688,NR_027085	chr1,chr1	-,+	PEF1,LOC284551	122650,-2362
chr22:31802078-31802658	chr22	+	31802271	31802451	True	NM_032051,NM_004147	chr22,chr22	-,+	PATZ1,DRG1	-60022,-6791
chr12:10273444-10274461	chr12	+	10273689	10274363	True	NM_197949,NM_197948,NM_153022,NM_197954,NM_022570,NM_197950,NM_197947	chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,-,+,-,-,-,-	CLEC7A,CLEC7A,C12orf59,CLEC7A,CLEC7A,CLEC7A,CLEC7A	8556,8556,57193,8556,8556,8556,8556
chr4:190952543-190953258	chr10	+	135444748	135444987	False	NM_001127386	chr10	+	DUX4L2	35380
chr4:190952543-190953258	chr4	+	190952632	190953266	True	NM_012147,NM_001005217	chr4,chr4	+,-	DUX2,FRG2	35600,-4220
chr19:17984419-17984620	chr19	+	17984572	17984638	True	NM_000215,NM_000453	chr19,chr19	-,+	JAK3,SLC5A5	-25731,-1841
chr4:110634138-110634372	chr4	+	110634140	110634408	True	NM_018983,NM_001226,NM_032992	chr4,chr4,chr4	+,-,-	GAR1,CASP6,CASP6	102257,-9511,-9511
chr6:42981407-42981607	chr6	+	42981596	42981656	True	NM_014623,NM_033112,NM_057161	chr6,chr6,chr6	-,+,+	MEA1,RRP36,KLHDC3	12,7728,320
chr7:43947771-43949496	chr7	+	43948142	43948979	True	NM_017920,NM_001204871,NM_001077663,NM_015983	chr7,chr7,chr7,chr7	-,-,-,+	URGCP,URGCP-MRPS24,URGCP,UBE2D4	-1911,-1911,-1911,17055
chr17:48556581-48557382	chr17	+	48556645	48557405	True	NM_018346,NM_001267	chr17,chr17	+,-	RSAD1,CHAD	-513,-10418
chr12:54348822-54349058	chr12	+	54348823	54349023	True	NM_173860,NR_003716	chr12,chr12	+,-	HOXC12,HOTAIR	-160,13542
chrX:152938960-152939178	chrX	+	152938987	152939185	True	NM_001142805,NM_001039582,NM_001135740	chrX,chrX,chrX	+,-,-	SLC6A8,PNCK,PNCK	14566,681,-244
chr11:2157747-2158104	chr11	+	2157839	2158065	True	NM_001127598,NR_028044,NR_028043,NM_000612,NR_030158	chr11,chr11,chr11,chr11,chr11	-,+,+,-,-	IGF2,IGF2AS,IGF2AS,IGF2,MIR483	4326,3692,3692,2189,-2400
chr7:135430965-135432307	chr7	+	135431119	135432228	True	NM_205855,NM_001130929	chr7,chr7	-,+	FAM180A,PL-5283	1423,-83963
chr1:149889542-149890044	chr1	+	149889577	149889999	True	NM_014849,NM_016074	chr1,chr1	-,+	SV2A,BOLA1	-143,-18473
chr21:43737063-43737561	chr21	+	43737126	43737404	True	NM_003226,NM_001001895	chr21,chr21	-,+	TFF3,UBASH3A	-1420,86614
chr19:4156039-4156846	chr19	+	4156785	4156895	True	NM_032607,NM_001193285	chr19,chr19	+,-	CREB3L3,SIRT6	-3207,25751
chr1:34649944-34650871	chr1	+	34650006	34650753	True	NM_001134734,NM_052896	chr1,chr1	+,-	C1orf94,CSMD2	-7504,-18563
chr22:41073974-41074724	chr22	+	41074160	41074737	True	NM_020831,NM_005297	chr22,chr22	-,+	MKL1,MCHR1	-41470,444
chr3:48266582-48266817	chr3	+	48266595	48266845	True	NM_004345,NM_201567	chr3,chr3	+,-	CAMP,CDC25A	-1791,-36794
chr22:38036463-38036784	chr22	+	38036559	38036647	True	NM_006498,NM_018957	chr22,chr22	-,+	LGALS2,SH3BP1	-60535,-926
chr1:54307623-54308706	chr1	+	54308170	54308508	True	NM_000792,NR_033142,NM_001168551,NM_018087	chr1,chr1,chr1,chr1	+,-,-,-	DIO1,TMEM48,TMEM48,TMEM48	51352,-3945,-3945,-3945
chr2:75786567-75787741	chr2	+	75786610	75787747	True	NM_014763,NM_032181,NM_001135032	chr2,chr2,chr2	+,-,-	MRPL19,FAM176A,FAM176A	86161,9151,395
chr9:133458862-133460202	chr9	+	133458878	133459594	True	NR_027440,NM_003934	chr9,chr9	-,+	LOC100272217,FUBP3	-3997,-3969
chr20:29520188-29520598	chr20	+	29520344	29520570	True	NM_001037731,NR_003579	chr20,chr20	-,+	DEFB116,FRG1B	375868,91308
chr16:16024165-16024601	chr16	+	16024457	16024521	True	NM_144600,NM_004996	chr16,chr16	-,+	FOPNL,ABCC1	-42010,18912
chr16:1845375-1846239	chr16	+	1845475	1845815	True	NM_001146006,NR_027389,NM_012225,NM_004970	chr16,chr16,chr16,chr16	-,-,+,-	IGFALS,IGFALS,NUBP2,IGFALS	-1741,-566,-12593,-1741
chr7:82795215-82795745	chr7	+	82795379	82795669	True	NM_033026,NM_014510,NM_001127444	chr7,chr7,chr7	-,-,+	PCLO,PCLO,CD36	-3182,-3182,-2519669
chr7:12629141-12629638	chr7	+	12629157	12629647	True	NM_033128,NM_001135924	chr7,chr7	+,-	SCIN,VWDE	-67,-185305
chr17:4164929-4165340	chr17	+	4165038	4165292	True	NM_016376,NM_020740,NR_023347	chr17,chr17,chr17	-,-,+	ANKFY1,ANKFY1,CYB5D2	2032,2032,-118629
chr14:60063446-60064045	chr14	+	60063462	60064086	True	NM_016475,NM_001164399	chr14,chr14	+,-	JKAMP,C14orf38	-112352,-19913
chr11:20692136-20692759	chr11	+	20692164	20692783	True	NM_201551,NM_006157,NM_001029865	chr11,chr11,chr11	+,+,-	NELL1,NELL1,DBX1	-1098,-1098,-510294
chr8:678743-679189	chr8	+	678746	679222	True	NM_207332,NM_183421	chr8,chr8	-,+	ERICH1,FBXO25	2054,-322002
chr12:5503392-5504996	chr12	+	5503545	5504769	True	NM_020373,NM_001102654	chr12,chr12	-,+	ANO2,NTF3	550679,36510
chr5:38260926-38262547	chr5	+	38261010	38262432	True	NM_152403,NM_001127671	chr5,chr5	+,-	EGFLAM,LIFR	-2530,294366
chr7:56187445-56188603	chr7	+	56187558	56188374	True	NM_015411,NM_001145712	chr7,chr7	+,-	SUMF2,LOC389493	-55698,-3468
chr1:9649483-9649697	chr1	+	9649482	9649624	True	NM_001130924,NR_027045,NM_001010866	chr1,chr1,chr1	+,-,+	TMEM201,C1orf200,TMEM201	-601,65070,-601
chr17:11945352-11945608	chr17	+	11945505	11945663	True	NM_144680,NM_003010	chr17,chr17	-,+	ZNF18,MAP2K4	-44816,-21425
chr12:57389979-57391086	chr12	+	57389984	57391096	True	NM_007264,NM_014830	chr12,chr12	+,-	GPR182,ZBTB39	-1680,9251
chr10:94602813-94603326	chr10	+	94602921	94603332	True	NM_004969,NM_001013848,NM_019053	chr10,chr10,chr10	-,+,+	IDE,EXOC6,EXOC6	-269069,-8502,4892
chrX:21422829-21424260	chrX	+	21423246	21424129	True	NM_153270,NM_014927	chrX,chrX	-,+	KLHL34,CNKSR2	252370,-30768
chr17:63102002-63102933	chr17	+	63102343	63102889	True	NM_006572,NM_001165933	chr17,chr17	-,+	GNA13,RGS9	-49423,30566
chr19:14990590-14992436	chr19	+	14990886	14992377	True	NM_030901,NM_012377	chr19,chr19	-,+	OR7A17,OR7C2	-159,59923
chr1:1953115-1953814	chr1	+	1953165	1953637	True	NM_000815,NM_001080484	chr1,chr1	+,-	GABRD,KIAA1751	-2448,-17889
chr11:66061717-66061953	chr11	+	66061799	66061935	True	NM_020470,NM_153266	chr11,chr11	-,+	YIF1A,TMEM151A	-5161,-2477
chr7:102074732-102075871	chr7	+	102074736	102075920	True	NM_017621,NM_032831,NM_001126340	chr7,chr7,chr7	-,+,+	ALKBH4,ORAI2,ORAI2	29451,-791,-791
chr19:58039276-58039957	chr19	+	58039310	58039862	True	NM_001199295,NM_001039654,NM_153263	chr19,chr19,chr19	+,-,+	ZNF549,ZNF550,ZNF549	-668,27915,-668
chr17:17876384-17876597	chr17	+	17876398	17876645	True	NM_001130090,NM_001130091,NM_001130092,NM_001033551,NM_031294,NM_001082968	chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,-,+,-	LRRC48,LRRC48,LRRC48,TOM1L2,LRRC48,TOM1L2	-322,-322,-322,-614,-322,-614
chr8:35093702-35094016	chr8	+	35093740	35094012	True	NM_080872,NM_024025	chr8,chr8	+,-	UNC5D,DUSP26	-816,-1636301
chr15:52033838-52035130	chr15	+	52034170	52034883	True	NM_001143917,NM_014548,NM_153374,NM_001142885	chr15,chr15,chr15,chr15	-,+,-,+	LYSMD2,TMOD2,LYSMD2,TMOD2	8818,8874,-3850,8874
chr10:81965980-81966687	chr10	+	81966293	81966597	True	NM_145869,NM_145868,NM_001012973,NM_001157	chr10,chr10,chr10,chr10	-,-,+,-	ANXA11,ANXA11,PLAC9,ANXA11	-965,-965,-74087,-965
chrX:153166390-153167691	chrX	+	153166605	153167685	True	NM_001164741,NM_001146151,NM_000054,NR_027419	chrX,chrX,chrX,chrX	-,+,+,+	ARHGAP4,AVPR2,AVPR2,AVPR2	24079,2843,2843,299
chr19:12938430-12938761	chr19	+	12938559	12938629	True	NM_001080997,NM_014975,NM_031429	chr19,chr19,chr19	-,+,-	RTBDN,MAST1,RTBDN	2628,10629,7651
chr15:102031715-102031918	chr15	+	102031717	102031967	True	NM_002570,NM_001005326,NM_138324,NM_138319,NM_138325,NM_138322,NM_138323,NM_138320,NM_138321	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,+,-,-,-,-,-,-,-	PCSK6,OR4F6,PCSK6,PCSK6,PCSK6,PCSK6,PCSK6,PCSK6,PCSK6	-1530,313955,-1530,-1530,-1530,-1530,-1530,-1530,-1530
chr9:32573039-32573312	chr9	+	32573066	32573318	True	NM_001199987,NM_002493,NR_033992,NM_182739	chr9,chr9,chr9,chr9	-,-,+,-	NDUFB6,NDUFB6,LOC100129250,NDUFB6	82,82,-21346,82
chr2:242294181-242294480	chr2	+	242294412	242294522	True	NM_005336,NM_014808	chr2,chr2	-,+	HDLBP,FARP2	-39158,1141
chr14:35210769-35212031	chr14	+	35210971	35211912	True	NR_002937,NR_028131	chr14,chr14	+,-	C14orf19,CFL2	197215,-26942
chr19:571205-571822	chr19	+	571304	571708	True	NM_198589,NM_005035,NM_001728,NM_198591	chr19,chr19,chr19,chr19	+,-,+,+	BSG,POLRMT,BSG,BSG	828,61910,828,-30
chr3:173113959-173114514	chr3	+	173114054	173114532	True	NM_014932,NM_031955	chr3,chr3	+,-	NLGN1,SPATA16	1711,-254996
chr10:38244770-38245564	chr10	+	38244940	38245564	True	NM_145011,NM_006954	chr10,chr10	-,+	ZNF25,ZNF33A	19946,54013
chr12:131719569-131720140	chr12	+	131719573	131719694	True	NR_026670,NM_194356	chr12,chr12	+,-	LOC116437,STX2	-70068,-395762
chr12:131719569-131720140	chr12	-	131913879	131913950	False	NR_026670,NM_194356	chr12,chr12	+,-	LOC116437,STX2	-264375,-590068
chr13:50656190-50656616	chr13	+	50656241	50656634	True	NR_029485,NR_002605	chr13,chr13	-,+	MIR15A,DLEU1	-32904,-8
chr19:55578784-55579923	chr19	+	55578795	55579617	True	NR_027382,NM_001145971,NR_027381,NM_138412,NM_133180	chr19,chr19,chr19,chr19,chr19	-,-,-,-,+	RDH13,RDH13,RDH13,RDH13,EPS8L1	-4210,-4210,-4210,1349,7603
chr21:47746398-47746647	chr21	+	47746488	47746656	True	NM_006031,NM_058180	chr21,chr21	+,-	PCNT,C21orf58	-2513,-2703
chr18:18683617-18684412	chr18	+	18683716	18684194	True	NM_005406,NM_001142966	chr18,chr18	-,+	ROCK1,GREB1L	7674,138008
chr6:88029592-88030567	chr6	+	88030110	88030604	True	NM_198568,NM_001042493,NM_020425	chr6,chr6,chr6	-,+,+	GJB7,C6orf162,C6orf162	8442,1701,1701
chr4:8950581-8951443	chr4	+	8951208	8951327	True	NM_018942,NM_001040071	chr4,chr4	-,+	HMX1,LOC650293	-77665,149
chr10:124317360-124317810	chr10	+	124317695	124317859	True	NM_017579,NM_001010912,NM_004406,NM_007329	chr10,chr10,chr10,chr10	+,-,+,+	DMBT1,C10orf120,DMBT1,DMBT1	2321,141529,2321,2321
chr16:20547106-20548598	chr16	+	20547165	20548646	True	NM_001105069,NM_001010845	chr16,chr16	-,+	ACSM2B,ACSM2A	39100,-84357
chrY:19869233-19869597	chrY	+	19869247	19869585	True	NR_028084,NM_001002906	chrY,chrY	+,-	FAM41AY2,XKRY2	-256460,12905
chrY:19869233-19869597	chrY	-	20310189	20310527	False	NM_004677,NR_028083	chrY,chrY	+,-	XKRY,FAM41AY1	-12905,256455
chr9:135545626-135545922	chr9	+	135545676	135545970	True	NM_022779,NM_012204,NM_138620	chr9,chr9,chr9	-,+,-	DDX31,GTF3C4,DDX31	10,1,10
chr20:2489918-2490207	chr20	+	2489946	2490234	True	NM_024325,NM_080751	chr20,chr20	-,+	ZNF343,TMC2	-168,27018
chr13:103452704-103452926	chr13	+	103452807	103452967	True	NM_001159596,NM_024089,NM_017693,NM_001204425	chr13,chr13,chr13,chr13	+,-,+,+	BIVM,KDELC1,BIVM,BIVM-ERCC5	-1459,-1403,-1459,6528
chr15:89090789-89092396	chr15	+	89090864	89091970	True	NM_001144074,NR_031590,NR_026645,NM_017996	chr15,chr15,chr15,chr15	-,+,-,-	DET1,MIR1179,DET1,DET1	-952,59367,-952,-952
chr10:71904338-71904930	chr10	+	71904454	71904966	True	NM_018649,NM_001040273,NM_173555	chr10,chr10,chr10	+,-,-	H2AFY2,TYSND1,TYSND1	-92148,1580,1580
chr11:62189142-62190155	chr11	+	62189343	62189911	True	NM_003357,NM_206998	chr11,chr11	+,-	SCGB1A1,SCGB1D4	-2887,-122807
chr2:43038267-43038506	chr2	+	43038334	43038424	True	NM_020744,NM_012205	chr2,chr2	+,-	MTA3,HAAO	-242714,-18583
chr1:155052204-155052441	chr1	+	155052212	155052440	True	NM_144622,NM_004952	chr1,chr1	-,+	DCST2,EFNA3	-45955,-915
chr2:234464684-234465585	chr2	+	234464850	234465634	True	NM_019076,NM_018218	chr2,chr2	+,-	UGT1A8,USP40	60656,8652
chr11:133734539-133734772	chr11	+	133734619	133734683	True	NM_174927,NR_027276	chr11,chr11	-,+	SPATA19,LOC100128239	-19227,167483
chr12:7053673-7053878	chr12	+	7053676	7053862	True	NM_138425,NM_080548,NM_080549,NR_003010,NM_002831	chr12,chr12,chr12,chr12,chr12	+,+,+,-,+	C12orf57,PTPN6,PTPN6,SCARNA12,PTPN6	-524,1877,6571,22957,6571
chr3:171177524-171177833	chr3	+	171177528	171177828	True	NM_015028,NM_001164436,NR_027767,NM_001161566,NM_001161564,NM_001161565,NM_001161562,NM_001161563,NM_001161560,NM_001161561	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-,-,-,-,-	TNIK,TMEM212,TNIK,TNIK,TNIK,TNIK,TNIK,TNIK,TNIK,TNIK	419,383310,419,419,419,419,419,419,419,419
chr19:45755568-45757447	chr19	+	45755930	45757237	True	NM_031417,NM_001199867,NM_138568	chr19,chr19,chr19	+,+,-	MARK4,MARK4,EXOC3L2	-1465,-1465,-18461
chr8:48068716-48069342	chr8	+	48068747	48069163	True	NR_037168,NM_005195	chr8,chr8	+,-	LOC100287846,CEBPD	31766,581613
chr20:43029378-43029730	chr20	+	43029479	43029707	True	NM_178850,NR_037419,NM_000457,NM_001080472,NM_178849	chr20,chr20,chr20,chr20,chr20	+,+,+,-,+	HNF4A,MIR3646,HNF4A,FITM2,HNF4A	216,7052,216,-89590,216
chr22:17644686-17645033	chr22	+	17644686	17644834	True	NM_033070,NM_017829,NR_024482,NR_024483	chr22,chr22,chr22,chr22	-,-,+,+	CECR5,CECR5,CECR4,CECR4	-4517,1393,-4458,-4458
chr6:3075211-3076312	chr6	+	3075212	3076197	True	NR_033884,NM_003804	chr6,chr6	-,+	LOC401233,RIPK1	-50207,860
chr12:127585138-127586418	chr12	+	127585330	127586386	True	NR_033970,NR_015398	chr12,chr12	-,+	LOC440117,LOC100128554	-226094,-658366
chr7:16401570-16401846	chr7	+	16401835	16401895	True	NM_001195280,NM_001101417	chr7,chr7	+,-	LOC100506049,ISPD	164609,59102
chrX:100469555-100471000	chrX	+	100469809	100471040	True	NM_001171184,NM_001939,NM_001168474	chrX,chrX,chrX	+,+,-	DRP2,DRP2,TAF7L	3892,3892,75339
chr2:7054259-7055604	chr2	+	7054394	7055568	True	NR_033997,NM_014746	chr2,chr2	-,+	LOC386597,RNF144A	3296,1954
chr9:90591864-90593209	chr9	+	90592238	90593055	True	NM_001039803,NM_001145124,NM_001170640,NM_178432,NM_001170639,NM_012119	chr9,chr9,chr9,chr9,chr9,chr9	-,+,-,-,-,-	CDK20,FAM75C1,CDK20,CDK20,CDK20,CDK20	-2543,-59422,-2543,-2543,-2543,-2543
chr4:140478800-140479751	chr4	+	140478996	140479718	True	NM_031296,NM_030648	chr4,chr4	+,-	RAB33B,SETD7	-104087,-1419
chr9:139097064-139097325	chr9	+	139097203	139097311	True	NM_015597,NM_014564,NM_178138	chr9,chr9,chr9	+,-,-	GPSM1,LHX3,LHX3	124620,-2199,-248
chr10:90488338-90488567	chr10	+	90488352	90488616	True	NM_001080518,NM_144590	chr10,chr10	+,-	LIPK,ANKRD22	-4102,123166
chr18:78004074-78004331	chr18	+	78004088	78004334	True	NR_028339	chr18	+	LOC100130522	-98332
chr7:22766836-22767053	chr7	+	22766870	22766946	True	NM_000600,NM_019059	chr7,chr7	+,-	IL6,TOMM7	-155,95525
chr19:48947576-48947949	chr19	+	48947579	48947871	True	NM_006801,NM_031485	chr19,chr19	-,+	KDELR1,GRWD1	-52769,1158
chr9:140114993-140115499	chr9	+	140115005	140115491	True	NM_001190228,NM_080877,NM_001177316,NM_001177317,NM_031297,NM_199001	chr9,chr9,chr9,chr9,chr9,chr9	+,+,+,+,-,+	LOC643596,SLC34A3,SLC34A3,SLC34A3,RNF208,C9orf169	6526,9893,9717,9717,334,4152
chr1:235323106-235324274	chr1	+	235323879	235324240	True	NM_001037277,NM_015014,NR_027762,NM_001161533	chr1,chr1,chr1,chr1	+,-,-,-	GGPS1,RBM34,RBM34,RBM34	167512,381,381,381
chr21:30577407-30577845	chr21	+	30577673	30577813	True	NM_006585,NR_027072	chr21,chr21	-,+	CCT8,NCRNA00189	-131663,-11941
chr6:53518958-53520495	chr6	+	53519042	53519888	True	NM_018214,NM_001003760	chr6,chr6	+,-	LRRC1,KLHL31	139889,10674
chr12:117626321-117626654	chr12	+	117626485	117626688	True	NM_153348,NM_033624,NM_015002	chr12,chr12,chr12	+,-,-	FBXW8,FBXO21,FBXO21	-277786,1668,1668
chr10:97452185-97452436	chr10	+	97452270	97452341	True	NM_001143973,NM_001098175,NM_015631	chr10,chr10,chr10	-,+,-	TCTN3,ENTPD1,TCTN3	1616,19194,1616
chr2:74758991-74759838	chr2	+	74759046	74759820	True	NM_133637,NM_181575,NM_145074,NM_013247	chr2,chr2,chr2,chr2	-,-,+,+	DQX1,AUP1,HTRA2,HTRA2	-5638,-2072,-2565,-2565
chr6:76727560-76728420	chr6	+	76727790	76728442	True	NM_001563,NM_004999	chr6,chr6	-,+	IMPG1,MYO6	53943,-268932
chr4:141490295-141490600	chr4	+	141490421	141490645	True	NM_021833,NM_153702	chr4,chr4	-,+	UCP1,ELMOD2	-462,-45160
chr5:89769408-89769692	chr5	+	89769412	89769630	True	NM_006467,NM_203406	chr5,chr5	+,-	POLR3G,MBLAC2	1050,1005
chr2:45837989-45838291	chr2	+	45838091	45838333	True	NM_018079,NM_005400	chr2,chr2	-,+	SRBD1,PRKCE	150,40709
chr8:23099324-23101178	chr8	+	23100155	23101226	True	NM_152272,NM_003844	chr8,chr8	+,-	CHMP7,TNFRSF10A	-3,-17475
chr1:93645815-93646078	chr1	+	93645818	93645986	True	NM_016040,NM_206886,NM_001167830,NR_030761	chr1,chr1,chr1,chr1	-,+,-,-	TMED5,CCDC18,TMED5,TMED5	310,294,310,310
chr11:18289436-18289714	chr11	+	18289465	18289661	True	NM_000331,NM_001178006,NM_199161,NM_030754	chr11,chr11,chr11,chr11	+,+,+,-	SAA1,SAA1,SAA1,SAA2	-1708,-1708,-1708,-19244
chr11:18289436-18289714	chr11	-	18268353	18268403	False	NM_001127380,NM_001199744,NM_030754,NM_000331,NM_006512	chr11,chr11,chr11,chr11,chr11	-,-,-,+,-	SAA2,SAA2-SAA4,SAA2,SAA1,SAA4	1868,1868,1868,19404,-9969
chrX:112053387-112053656	chrX	+	112053394	112053605	True	NM_001004308,NM_001113490	chrX,chrX	+,-	ZCCHC16,AMOT	-727196,12800
chrX:37711013-37711954	chrX	+	37711140	37711991	True	NM_000397,NM_006520	chrX,chrX	+,-	CYBB,DYNLT3	-71928,-4251
chr2:48945075-48945902	chr2	+	48945148	48945944	True	NM_000233,NM_006872	chr2,chr2	-,+	LHCGR,GTF2A1L	36986,-100262
chr6:14716035-14717603	chr6	+	14716154	14717496	True	NM_001031713,NM_004973	chr6,chr6	-,+	CCDC90A,JARID2	-901365,529030
chr8:93111818-93112851	chr8	+	93111882	93112897	True	NM_001198679,NM_175635,NM_175634,NM_001198625,NM_001198627,NM_001198626,NM_001198632,NM_001198633,NM_001198630,NM_001198631,NM_001198629,NM_001198628,NM_001198634,NM_052832	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,-,-,-,-,-,-,-,-,-,+	RUNX1T1,RUNX1T1,RUNX1T1,RUNX1T1,RUNX1T1,RUNX1T1,RUNX1T1,RUNX1T1,RUNX1T1,RUNX1T1,RUNX1T1,RUNX1T1,RUNX1T1,SLC26A7	-4000,-4392,2608,-4000,-4000,-4000,-4392,2608,-4392,-4000,-4392,-12,-4000,-850417
chr1:249211039-249211532	chr1	+	249211097	249211549	True	NM_001193328,NM_001017434	chr1,chr1	-,+	ZNF692,PGBD2	-57782,-10706
chr19:4277376-4277709	chr19	+	4277377	4277701	True	NM_001169126,NM_020209	chr19,chr19	-,+	TMIGD2,SHD	24777,896
chrX:37209162-37210467	chrX	+	37209201	37210387	True	NM_001173489,NM_001173486,NM_001173490,NM_001142395,NM_000950,NM_006520	chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,-	PRRG1,PRRG1,PRRG1,PRRG1,PRRG1,DYNLT3	-669,-724,-669,-724,-724,496553
chr11:76576326-76578107	chr11	+	76576475	76577916	True	NM_018367,NR_024042	chr11,chr11	+,-	ACER3,GUCY2E	-4615,-143642
chr11:123601977-123603632	chr11	+	123602036	123603670	True	NM_003455,NM_001005197	chr11,chr11	-,+	ZNF202,OR8D4	8743,173468
chr11:62575340-62576480	chr11	+	62575345	62576322	True	NM_199337,NM_006362,NM_001081491	chr11,chr11,chr11	+,-,-	TMEM179B,NXF1,NXF1	-20522,-2381,-2381
chr10:69646923-69647493	chr10	+	69647046	69647336	True	NM_201262,NM_001142498,NM_012238	chr10,chr10,chr10	-,+,+	DNAJC12,SIRT1,SIRT1	-49109,-2165,-2677
chrX:99898193-99899376	chrX	+	99898326	99899375	True	NM_003270,NM_014467	chrX,chrX	-,+	TSPAN6,SRPX2	-6532,-7
chr6:47679289-47680674	chr6	+	47679545	47680510	True	NM_153838,NM_001013732	chr6,chr6	+,-	GPR115,C6orf138	-13307,355974
chr10:99081201-99081494	chr10	+	99081210	99081529	True	NM_005479,NM_012083	chr10,chr10	+,-	FRAT1,FRAT2	-2239,12980
chr1:180165166-180165580	chr1	+	180165206	180165514	True	NR_037642,NR_026900	chr1,chr1	-,+	LOC100527964,FLJ23867	78352,1629
chr3:131753625-131753879	chr3	+	131753672	131753902	True	NM_001099,NM_130808	chr3,chr3	+,-	ACPP,CPNE4	282308,-8
chr11:57227287-57227831	chr11	+	57227315	57227844	True	NM_017611,NM_178570	chr11,chr11	-,+	SLC43A3,RTN4RL2	-32262,494
chr4:100058706-100059616	chr4	+	100058709	100059578	True	NM_000670,NR_037884	chr4,chr4	-,+	ADH4,LOC100507053	5928,-48758
chr16:22103439-22104149	chr16	+	22103508	22104188	True	NM_173615,NR_033694	chr16,chr16	+,-	VWA3A,PDZD9	-8,-91077
chr22:24094099-24094700	chr22	+	24094357	24094739	True	NM_013378,NM_021916,NM_182520	chr22,chr22,chr22	-,-,+	VPREB3,ZNF70,C22orf15	1941,-1078,10468
chr19:41618396-41618778	chr19	+	41618623	41618763	True	NM_030589,NM_000774	chr19,chr19	-,+	CYP2A7,CYP2F1	-229966,1589
chr11:124672427-124673823	chr11	+	124672647	124673621	True	NM_022370,NM_024631	chr11,chr11	+,-	ROBO3,C11orf61	61683,-2348
chr10:93554478-93556298	chr10	+	93555577	93556297	True	NM_025235,NM_152429	chr10,chr10	+,-	TNKS2,FGFBP3	1853,113011
chr1:174983951-174985223	chr1	+	174983971	174984941	True	NR_037606,NM_014412,NM_022100	chr1,chr1,chr1	-,+,-	MRPS14,CACYBP,MRPS14	7700,-15147,7700
chr7:2350972-2351292	chr7	+	2351145	2351297	True	NM_001037283,NM_013321	chr7,chr7	+,-	EIF3B,SNX8	43176,2852
chr6:121619911-121621309	chr6	+	121619911	121621058	True	NM_152730,NM_000165	chr6,chr6	-,+	C6orf170,GJA1	34643,135686
chr2:175525929-175526148	chr2	+	175525955	175526093	True	NM_024583,NM_001077269	chr2,chr2	+,-	SCRN3,WIPF1	-265549,21584
chr12:14960819-14961948	chr12	+	14961142	14962001	True	NM_175874,NM_016312,NM_001013698	chr12,chr12,chr12	+,-,-	C12orf60,WBP11,C12orf69	-4694,-4741,5174
chr6:89926952-89927299	chr6	+	89927017	89927330	True	NM_001010853,NM_002042	chr6,chr6	+,-	PM20D2,GABRR1	-71300,223
chr12:58167369-58167983	chr12	+	58167516	58167986	True	NM_000785,NM_005371,NM_023033,NM_015433,NM_001172695,NM_001172696,NM_001172697,NM_206914,NM_005726	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,-,-,+,+,+,+,+,+	CYP27B1,METTL1,METTL1,METTL21B,TSFM,TSFM,TSFM,METTL21B,TSFM	-6540,-1602,-1602,-1191,8541,8541,8541,-1191,8541
chr17:46908066-46908269	chr17	+	46908189	46908251	True	NM_005831,NM_001130918	chr17,chr17	+,-	CALCOCO2,TTLL6	120,-13720
chr16:56597044-56597481	chr16	+	56597101	56597487	True	NM_031885,NM_032935	chr16,chr16	-,+	BBS2,MT4	-43093,1473
chr19:14203202-14203968	chr19	+	14203397	14203982	True	NR_024282,NM_138352	chr19,chr19	+,-	LOC113230,SAMD1	-19627,-2165
chr10:95719349-95719623	chr10	+	95719354	95719572	True	NR_002319,NM_016341	chr10,chr10	-,+	PIPSL,PLCE1	2150,34173
chr15:77123050-77123768	chr15	+	77123055	77123781	True	NM_002902,NM_001145923	chr15,chr15	+,-	RCN2,SCAPER	100180,30554
chr13:67800391-67801708	chr13	+	67800411	67801746	True	NR_002717,NM_020403,NM_203487	chr13,chr13,chr13	+,-,-	ATXN8OS,PCDH9,PCDH9	2879598,2773,2773
chr20:45146913-45148130	chr20	+	45147766	45148169	True	NM_018102,NM_030777,NM_199441	chr20,chr20,chr20	-,+,-	ZNF334,SLC2A10,ZNF334	-5572,190109,-5572
chr13:24007387-24009328	chr13	+	24007399	24009230	True	NM_001204459,NM_014363	chr13,chr13	+,-	TNFRSF19,SACS	135278,-190
chr22:21023549-21023895	chr17	-	20745828	20745878	False	NM_001190790,NM_001004306	chr17,chr17	+,-	CDRT15L2,CCDC144NL	-262842,53625
chr22:21023549-21023895	chr19	+	1878878	1878928	False	NM_079834,NM_001130111,NM_031213	chr19,chr19,chr19	+,-,-	SCAMP4,FAM108A1,FAM108A1	26444,6640,6640
chr22:21023549-21023895	chr22	+	21023579	21023755	True	NM_002650,NR_024592	chr22,chr22	-,+	PI4KA,POM121L4P	65250,20087
chr22:21023549-21023895	chr22	+	22470836	22470886	False	NM_007128,NM_003935	chr22,chr22	+,-	VPREB1,TOP3B	128313,-133689
chr22:21023549-21023895	chr1	+	214780618	214780668	False	NM_016343,NM_005401	chr1,chr1	+,-	CENPF,PTPN14	-4137,-55594
chr13:32308502-32309021	chr13	+	32308599	32309053	True	NM_130806,NM_001166058,NM_006644	chr13,chr13,chr13	+,+,-	RXFP2,RXFP2,HSPH1	4625,4625,-572482
chr11:67483036-67483358	chr11	+	67483175	67483297	True	NM_007103,NM_001031615	chr11,chr11	+,-	NDUFV1,ALDH3B2	-108903,-34490
chr20:35232686-35233034	chr20	+	35232837	35233038	True	NM_199483,NM_001199534,NM_032214,NM_018840,NR_026562	chr20,chr20,chr20,chr20,chr20	+,+,-,+,+	C20orf24,C20orf24,SLA2,C20orf24,C20orf24	1098,1098,41570,1098,1098
chr3:138046354-138048304	chr3	+	138046541	138048019	True	NM_012219,NM_178130	chr3,chr3	+,-	MRAS,TXNDC6	18605,761
chr21:33760398-33760676	chr21	+	33760529	33760672	True	NM_014825,NR_026845	chr21,chr21	-,+	URB1,C21orf119	4691,4769
chr5:63258309-63258756	chr5	+	63258312	63258801	True	NM_000524,NM_178532	chr5,chr5	-,+	HTR1A,RNF180	-766,202869
chr9:103959593-103959855	chr9	+	103959598	103959906	True	NM_001127610,NM_017753	chr9,chr9	-,+	BAAT,LPPR1	185947,-12332
chr2:113884732-113885521	chr2	+	113884764	113885541	True	NM_173842,NM_000577,NM_173841,NM_173178,NM_173843	chr2,chr2,chr2,chr2,chr2	+,+,+,-,+	IL1RN,IL1RN,IL1RN,IL1F8,IL1RN	-50,-9345,-9345,-74324,-9345
chr18:11752125-11752604	chr18	+	11752200	11752530	True	NM_023075,NM_001142339,NM_002071	chr18,chr18,chr18	-,+,+	MPPE1,GNAL,GNAL	156161,-689,-689
chr4:154709757-154710025	chr4	+	154709778	154709914	True	NM_003264,NM_003013	chr4,chr4	+,-	TLR2,SFRP2	-104388,364
chr20:56283445-56283836	chr20	+	56283453	56283717	True	NM_020182,NM_199169,NM_002591,NM_199170,NM_199171	chr20,chr20,chr20,chr20,chr20	-,-,+,-,-	PMEPA1,PMEPA1,PCK1,PMEPA1,PMEPA1	1364,1958,-147367,1958,2874
chr17:21521194-21521606	chr17	+	21521577	21521647	True	NM_001113434,NM_001194958	chr17,chr17	-,+	C17orf51,KCNJ18	-66636,-213180
chr8:20067160-20067928	chr8	+	20067282	20067984	True	NM_001693,NM_003053	chr8,chr8	+,-	ATP6V1B2,SLC18A1	-12643,-26565
chr21:45590234-45590507	chr21	+	45590274	45590548	True	NM_198155,NM_015259	chr21,chr21	+,-	C21orf33,ICOSLG	-36831,70336
chr4:1715545-1716124	chr4	+	1715727	1715937	True	NM_006527,NM_138385,NM_006342,NM_001127266	chr4,chr4,chr4,chr4	-,-,+,-	SLBP,TMEM129,TACC3,TMEM129	-1697,7197,7328,7197
chr16:83842402-83843366	chr16	+	83842428	83842968	True	NM_001080442,NM_001537	chr16,chr16	-,+	SLC38A8,HSBP1	232844,-893
chrX:135334165-135334690	chrX	+	135334167	135334461	True	NM_024597,NM_001173516,NM_001173517,NM_153834	chrX,chrX,chrX,chrX	-,-,-,+	MAP7D3,MAP7D3,MAP7D3,GPR112	-429,4230,-429,48660
chr8:17744662-17745078	chr8	+	17744701	17745057	True	NM_006197,NM_201552,NM_201553,NM_147203,NM_004467	chr8,chr8,chr8,chr8,chr8	+,-,-,-,-	PCM1,FGL1,FGL1,FGL1,FGL1	35308,8048,7914,7914,8048
chr5:34190805-34191153	chr5	+	34190829	34190879	True	NM_016568,NR_037951	chr5,chr5	+,-	RXFP3,C1QTNF3-AMACR	-254389,-66196
chr20:17994236-17995684	chr20	+	17994454	17995420	True	NM_021220,NM_052865	chr20,chr20	-,+	OVOL2,C20orf72	43151,-44750
chr5:43313317-43313562	chr5	+	43313354	43313588	True	NM_153361,NM_002130,NM_001098272	chr5,chr5,chr5	+,-,-	MGC42105,HMGCS1,HMGCS1	-121078,57,57
chr11:124252757-124253167	chr11	+	124252774	124253214	True	NM_001005468,NM_001005198	chr11,chr11	-,+	OR8B2,OR8G5	77,-118102
chr11:124252757-124253167	chr11	+	124266782	124267222	False	NM_001005198,NM_001005467	chr11,chr11	+,-	OR8G5,OR8B3	-132110,127
chr13:113303324-113304230	chr13	+	113303435	113304147	True	NM_207440,NM_006322	chr13,chr13	+,-	C13orf35,TUBGCP3	-2128,-60954
chr19:58236052-58237385	chr19	+	58236184	58236504	True	NM_173632,NM_024833	chr19,chr19	+,-	ZNF776,ZNF671	21659,2541
chr1:1676185-1676447	chr1	+	1676185	1676489	True	NM_182838,NM_001199787,NR_002946	chr1,chr1,chr1	-,-,+	SLC35E2,SLC35E2,MMP23A	999,999,-44858
chr1:1676185-1676447	chr1	+	1622910	1623214	False	NR_002946,NM_001110781	chr1,chr1	+,-	MMP23A,SLC35E2B	8163,1079
chr15:59729368-59729827	chr15	+	59729377	59729815	True	NM_152450,NM_004998	chr15,chr15	+,-	FAM81A,MYO1E	556,-64306
chr1:28698551-28699892	chr1	+	28698737	28698978	True	NM_014280,NM_001048183	chr1,chr1	-,+	DNAJC8,PHACTR4	-139195,-2696
chr7:6052523-6052983	chr7	+	6052588	6052865	True	NM_006303,NR_003085,NM_000535	chr7,chr7,chr7	+,-,-	AIMP2,PMS2,PMS2	-3763,-3851,-3851
chr10:135380659-135381533	chr10	+	135380775	135381022	True	NM_130784,NR_033789,NM_001143763,NM_001143764,NM_000773	chr10,chr10,chr10,chr10,chr10	-,-,-,-,+	SYCE1,SPRNP1,SYCE1,SYCE1,CYP2E1	1904,2490,-1637,-1637,-39959
chr7:5633219-5633504	chr7	+	5633338	5633526	True	NM_001101,NM_003088	chr7,chr7	-,+	ACTB,FSCN1	-63106,-935
chr20:43848061-43848534	chr20	+	43848085	43848471	True	NM_003064,NM_003008	chr20,chr20	-,+	SLPI,SEMG2	34785,1538
chrX:16805392-16805602	chrX	+	16805413	16805577	True	NM_019857,NM_001168683,NM_018360	chrX,chrX,chrX	-,+,+	CTPS2,TXLNG,TXLNG	-74354,-909,-909
chrX:128870045-128870714	chrX	+	128870065	128870600	True	NM_017413,NM_003399	chrX,chrX	-,+	APLN,XPNPEP2	-81132,2345
chr2:20423543-20423761	chr2	+	20423570	20423766	True	NM_004040,NM_002997,NM_001006946	chr2,chr2,chr2	+,-,-	RHOB,SDC1,SDC1	223068,1211,1478
chr10:3105675-3106237	chr10	+	3105797	3106281	True	NM_002627,NM_014889	chr10,chr10	+,-	PFKP,PITRM1	3470,108772
chr10:126633509-126634178	chr10	+	126633675	126634170	True	NM_022802,NM_017580	chr10,chr10	-,+	CTBP2,ZRANB1	82340,-3045
chrX:89177141-89177411	chrY	+	3447368	3447638	False	NM_003140,NM_139214	chrY,chrY	-,+	SRY,TGIF2LY	-791576,-293
chrX:89177141-89177411	chrX	+	89177167	89177437	True	NM_138960,NM_004538	chrX,chrX	+,-	TGIF2LX,NAP1L3	-278,3751295
chr12:8212298-8214149	chr12	+	8212344	8213684	True	NM_004054,NM_015509	chr12,chr12	-,+	C3AR1,NECAP1	5321,21122
chr17:46981395-46981921	chr17	+	46981589	46981979	True	NM_023079,NM_007241	chr17,chr17	+,-	UBE2Z,SNF8	3751,40234
chr5:177658475-177658809	chr5	+	177658532	177658832	True	NM_153373,NM_031266	chr5,chr5	-,+	AGXT2L2,HNRNPAB	1021,-27075
chrX:134229166-134230245	chrX	+	134229168	134230162	True	NR_024493,NM_001078171	chrX,chrX	-,+	NCRNA00087,FAM127A	2621,-62886
chr9:77112059-77112529	chr9	+	77112287	77112549	True	NM_006914,NM_001177311	chr9,chr9	+,-	RORB,TRPM6	-86,389764
chr8:29602461-29603640	chr8	+	29602474	29603436	True	NR_026765,NR_024473	chr8,chr8	-,+	C8orf75,LOC286135	2239,175592
chr1:156252755-156253071	chr1	+	156252763	156253069	True	NR_026678,NM_015327,NM_032323	chr1,chr1,chr1	+,-,+	TMEM79,SMG5,TMEM79	-112,-143,1000
chr12:15538468-15540293	chr12	+	15538925	15540238	True	NM_032918,NM_030667	chr12,chr12	-,+	RERG,PTPRO	-164514,-63489
chr16:15066941-15067969	chr16	+	15067314	15067862	True	NM_015027,NM_173474	chr16,chr16	+,-	PDXDC1,NTAN1	970,82021
chr15:99550519-99550848	chr15	+	99550562	99550878	True	NM_001102612,NM_001167902,NM_015286	chr15,chr15,chr15	-,-,+	PGPEP1L,PGPEP1L,SYNM	-1677,196,94407
chr17:61778955-61779295	chr17	+	61779014	61779076	True	NM_007372,NM_030576	chr17,chr17	+,-	DDX42,LIMD2	72490,-1495
chr15:34828050-34828945	chr15	+	34828067	34828855	True	NR_036050,NM_175741,NM_001023567,NR_036261	chr15,chr15,chr15,chr15	-,+,-,-	MIR1233-1,C15orf55,GOLGA8B,MIR1233-2	-7495,-190053,17,-7495
chr15:34828050-34828945	chr15	+	34681846	34682634	False	NM_175741,NR_036050,NM_181077,NR_036261	chr15,chr15,chr15,chr15	+,-,-,-	C15orf55,MIR1233-1,GOLGA8A,MIR1233-2	-43832,-7495,17,-7495
chrX:110864030-110864457	chrX	+	110864040	110864222	True	NM_178153,NM_001039210	chrX,chrX	-,+	DCX,ALG13	-208580,60123
chr2:38237897-38238202	chr2	+	38238103	38238179	True	NM_000104,NM_144713	chr2,chr2	-,+	CYP1B1,FAM82A1	65194,-60559
chr15:90789942-90790908	chr15	+	90790082	90790926	True	NM_001029964,NM_006384	chr15,chr15	+,-	TTLL13,CIB1	1837,-12803
chr20:2670477-2671020	chr20	+	2670480	2670867	True	NM_174856,NM_001110514	chr20,chr20	-,+	IDH3B,EBF4	-25637,2656
chr3:39229319-39229976	chr3	+	39229386	39229992	True	NM_145755,NM_001198621,NM_194293	chr3,chr3,chr3	+,-,-	TTC21A,XIRP1,XIRP1	-80285,4143,4135
chr6:34358428-34359619	chr6	+	34358499	34359521	True	NM_006703,NM_020804	chr6,chr6	-,+	NUDT3,PACSIN1	986,74331
chr19:15529084-15529464	chr19	+	15529084	15529498	True	NM_014371,NR_031716	chr19,chr19	-,+	AKAP8L,MIR1470	385,30860
chr14:74225267-74225472	chr14	+	74225347	74225509	True	NM_194278,NM_001146154	chr14,chr14	-,+	C14orf43,PTGR2	1542,93024
chr2:218618401-218619942	chr2	+	218618420	218619716	True	NR_034176,NR_026597	chr2,chr2	+,-	RUFY4,DIRC3	279940,1650
chr1:118727656-118727992	chr1	+	118727689	118727955	True	NM_006784,NM_206996	chr1,chr1	+,-	WDR3,SPAG17	-255368,-57
chr6:14845549-14847149	chr6	+	14845828	14847083	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	399443,816263
chr17:36833726-36833940	chr17	+	36833768	36833834	True	NM_005937,NM_001130677	chr17,chr17	+,-	MLLT6,C17orf96	28038,-2581
chr16:51187889-51188195	chr16	+	51187889	51188152	True	NM_002968,NM_001042412,NM_001127892	chr16,chr16,chr16	-,+,-	SALL1,CYLD,SALL1	-2706,-411915,-3381
chr10:18949936-18951790	chr10	+	18950147	18951123	True	NM_178815,NM_182543	chr10,chr10	+,-	ARL5B,NSUN6	-1887,-9597
chr11:73693057-73693351	chr11	+	73693057	73693363	True	NM_153614,NM_003355	chr11,chr11	+,-	DNAJB13,UCP2	-31744,576
chr22:24032997-24033710	chr22	+	24033088	24033671	True	NM_153615,NR_024448	chr22,chr22	+,-	RGL4,LOC91316	-91,25992
chr4:9640288-9641267	chr4	+	9640560	9641312	True	NR_031688,NM_000798	chr4,chr4	-,+	MIR548I2,DRD5	-82623,141945
chr5:52860657-52861723	chr5	+	52860803	52861551	True	NR_030307,NM_002495	chr5,chr5	-,+	MIR581,NDUFS4	385936,-4397
chr6:1097122-1097505	chr6	+	1097261	1097554	True	NR_027116,NR_027115,NM_033260	chr6,chr6,chr6	-,-,+	LOC285768,LOC285768,FOXQ1	4064,4064,215120
chr4:143767083-143767285	chr4	+	143767187	143767307	True	NM_001101669,NM_032557,NM_003866	chr4,chr4,chr4	-,+,-	INPP4B,USP38,INPP4B	347,338762,347
chr19:2429700-2430294	chr19	+	2429723	2430321	True	NM_182973,NM_012458	chr19,chr19	+,-	TMPRSS9,TIMM13	-39990,-1848
chr14:103783486-103783715	chr14	+	103783494	103783662	True	NR_033938,NM_001969	chr14,chr14	-,+	LOC100131366,EIF5	-128129,16830
chr2:158180481-158182138	chr2	+	158180891	158182179	True	NM_014568,NM_001009959,NM_020711	chr2,chr2,chr2	+,-,-	GALNT5,ERMN,ERMN	-66609,2017,287
chr9:94115974-94116936	chr9	+	94116461	94116960	True	NM_001698,NR_037472	chr9,chr9	-,+	AUH,MIR3910-1	7301,281572
chr11:124972036-124972785	chr11	+	124972193	124972824	True	NM_198277,NM_001080546	chr11,chr11	+,-	SLC37A2,TMEM218	-39231,432
chr13:21634233-21634459	chr13	+	21634235	21634445	True	NM_014572,NM_005870	chr13,chr13	-,+	LATS2,SAP18	1327,80207
chr2:74612707-74613355	chr2	+	74612775	74613375	True	NM_001135040,NM_001190836,NM_001190837,NR_024463,NR_033935,NM_004082	chr2,chr2,chr2,chr2,chr2,chr2	-,-,-,+,-,-	DCTN1,DCTN1,DCTN1,LOC100189589,DCTN1,DCTN1	-5293,5889,-5293,19,5889,-5293
chr13:93920677-93921898	chr13	+	93920779	93921744	True	NM_001129889,NM_005708	chr13,chr13	-,+	DCT,GPC6	1210256,-41752
chr12:32109289-32109796	chr12	+	32109676	32109744	True	NM_018169,NM_001013699	chr12,chr12	+,-	C12orf35,H3F3C	2608,-164501
chr19:12591351-12592137	chr19	+	12591520	12592019	True	NM_152601,NM_153358	chr19,chr19	-,+	ZNF709,ZNF791	3672,129712
chr1:215739635-215740764	chr1	+	215739725	215740708	True	NM_206933,NM_016121	chr1,chr1	-,+	USH2A,KCTD3	856080,26
chr2:242833725-242834039	chr2	+	242833806	242833968	True	NM_173821,NM_005018	chr2,chr2	+,-	C2orf85,PDCD1	-21971,-32748
chr14:73360485-73360879	chr14	+	73360533	73360911	True	NM_012074,NM_001163508	chr14,chr14	-,+	DPF3,DCAF4	18,32128
chr7:11013127-11013519	chr7	+	11013147	11013551	True	NM_002489,NR_033435,NM_014660,NR_033436	chr7,chr7,chr7,chr7	-,+,+,+	NDUFA4,PHF14,PHF14,PHF14	-33334,-53,-53,-53
chr20:32319220-32319510	chr20	+	32319309	32319373	True	NM_032819,NM_183397	chr20,chr20	+,-	ZNF341,PXMP4	434,-11173
chr12:123382732-123384640	chr12	+	123382731	123384483	True	NM_003959,NM_024667	chr12,chr12	+,-	HIP1R,VPS37B	-62744,-2019
chr15:50481128-50482253	chr15	+	50481270	50482089	True	NM_003645,NM_001159629,NM_024837	chr15,chr15,chr15	+,+,-	SLC27A2,SLC27A2,ATP8B4	-6936,-6936,-69851
chr11:64005426-64005830	chr11	+	64005433	64005869	True	NM_057092,NM_138689,NM_005528,NM_003377,NM_004470,NM_001135208	chr11,chr11,chr11,chr11,chr11,chr11	+,-,+,+,+,+	FKBP2,PPP1R14B,DNAJC4,VEGFB,FKBP2,FKBP2	3718,8594,-7731,-3218,2543,2734
chrX:68048348-68048582	chrX	+	68048357	68048627	True	NM_001032396,NM_004429	chrX,chrX	-,+	PJA1,EFNB1	336788,212
chrX:21774830-21776035	chrX	+	21774888	21776002	True	NM_015884,NM_014332	chrX,chrX	+,-	MBTPS2,SMPX	81653,280
chr13:37498663-37500238	chr13	+	37498792	37500234	True	NM_001127217,NM_005905,NM_181503	chr13,chr13,chr13	-,-,+	SMAD9,SMAD9,EXOSC8	-4383,-4383,74443
chr12:100865789-100867321	chr12	+	100865846	100867220	True	NM_152317,NM_005123	chr12,chr12	-,+	DEPDC4,NR1H4	-204989,458
chrX:119378395-119378906	chrX	+	119378485	119378751	True	NR_027131,NM_006777,NM_001184742	chrX,chrX,chrX	-,+,+	NKAPP1,ZBTB33,ZBTB33	421,5855,5858
chr5:158885785-158887122	chr5	+	158885945	158887139	True	NR_037889,NR_027110	chr5,chr5	+,-	LOC285626,LOC285627	-127483,6195
chr1:235815863-235816831	chr1	+	235815873	235816819	True	NM_003193,NM_004485,NM_001098721,NM_001098722	chr1,chr1,chr1,chr1	+,-,-,-	TBCE,GNG4,GNG4,GNG4	-285196,-1819,-1819,-2580
chr6:94129434-94129732	chr6	+	94129574	94129704	True	NR_015362,NM_004440	chr6,chr6	+,-	TSG1,EPHA7	287096,-274
chr2:27505045-27506060	chr2	+	27505183	27506101	True	NM_003459,NM_173650,NM_187841,NM_032546	chr2,chr2,chr2,chr2	-,+,+,+	SLC30A3,DNAJC5G,TRIM54,TRIM54	-19223,-6945,-39,-39
chr1:160831549-160831910	chr1	+	160831666	160831910	True	NM_002348,NM_001166663,NM_001166664,NM_016382	chr1,chr1,chr1,chr1	+,-,-,-	LY9,CD244,CD244,CD244	-65795,832,832,832
chr5:72258642-72260301	chr5	+	72258821	72260209	True	NM_001146032,NM_138782,NM_152625	chr5,chr5,chr5	+,+,-	FCHO2,FCHO2,ZNF366	-7077,-7077,-455572
chr10:99349923-99351686	chr10	+	99350189	99351323	True	NM_001009997,NM_178832,NM_001134670,NM_138413	chr10,chr10,chr10,chr10	+,-,+,+	C10orf62,MORN4,HOGA1,HOGA1	-790,42071,-6138,-6138
chr2:103098596-103099577	chr2	+	103098679	103099609	True	NM_001011552,NM_032718	chr2,chr2	+,-	SLC9A4,MFSD9	-8968,253778
chr17:30671848-30672570	chr17	+	30671978	30672565	True	NM_001098507,NM_001032293,NR_030362,NM_022344,NM_003457	chr17,chr17,chr17,chr17,chr17	+,+,+,-,+	ZNF207,ZNF207,MIR632,C17orf75,ZNF207	4591,4591,4562,-2789,4591
chr15:38745131-38746273	chr15	+	38745377	38746225	True	NM_001042429,NM_001128602,NM_173611	chr15,chr15,chr15	+,-,+	FAM98B,RASGRP1,FAM98B	102,110832,102
chr1:156572368-156573131	chr1	+	156572512	156572940	True	NM_144772,NM_182679,NM_015590	chr1,chr1,chr1	+,-,-	APOA1BP,GPATCH4,GPATCH4	-11005,-1233,-1233
chr1:172414441-172416261	chr1	+	172414691	172416283	True	NM_153747,NM_002642,NM_139240	chr1,chr1,chr1	-,-,+	PIGC,PIGC,C1orf105	-1461,-1461,-24914
chr14:63781257-63781776	chr14	+	63781414	63781606	True	NM_145171,NM_020663	chr14,chr14	-,+	GPHB5,RHOJ	3019,-110328
chr14:70829199-70830990	chr14	+	70829322	70830758	True	NM_001204090,NM_003813,NM_016468	chr14,chr14,chr14	-,+,-	COX16,ADAM21,COX16	-2874,93458,-2874
chr12:29513899-29515228	chr12	+	29514536	29515235	True	NM_018099,NM_016570	chr12,chr12	+,-	FAR2,ERGIC2	-137998,18967
chr17:74636516-74636826	chr17	+	74636605	74636846	True	NM_018414,NR_004395	chr17,chr17	-,+	ST6GALNAC1,SNORD1A	3099,-78944
chr20:30061787-30062906	chr20	+	30061796	30062680	True	NM_001037500,NM_014012	chr20,chr20	-,+	DEFB124,REM1	-980,424
chr6:7987159-7987530	chr6	+	7987168	7987410	True	NM_030810,NR_027712	chr6,chr6	-,+	TXNDC5,PIP5K1P1	-76121,-884
chr8:22014497-22014722	chr8	+	22014624	22014764	True	NM_139278,NM_001199,NM_001172357,NR_033403,NR_033404,NM_001172410,NM_006129,NM_003018	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,+,+,+,+,+,+,+	LGI3,BMP1,SFTPC,BMP1,BMP1,SFTPC,BMP1,SFTPC	-280,7888,4419,7888,7888,4419,7888,4419
chr12:110012990-110013264	chr12	+	110013128	110013213	True	NM_001114185,NM_000431,NM_052845	chr12,chr12,chr12	+,+,-	MVK,MVK,MMAB	-1680,-1680,-1770
chr20:30777492-30777847	chr20	+	30777495	30777891	True	NR_002781,NM_172236	chr20,chr20	-,+	TSPY26P,POFUT1	322,17804
chr8:49834780-49836228	chr8	+	49834780	49836174	True	NM_003068,NM_001007176	chr8,chr8	-,+	SNAI2,C8orf22	-781,148728
chr10:127572534-127574427	chr10	+	127572590	127574256	True	NM_018180,NM_145235	chr10,chr10	-,+	DHX32,FANK1	-2706,10851
chr19:53236061-53236712	chr19	+	53236238	53236529	True	NR_023311,NM_001161499,NM_001161500,NM_001161501,NM_030972	chr19,chr19,chr19,chr19,chr19	+,-,-,-,-	ZNF137P,ZNF611,ZNF611,ZNF611,ZNF611	-136353,1841,1841,1831,-3103
chr16:30136237-30137055	chr16	+	30136342	30136469	True	NM_002746,NM_001109891,NR_027081,NM_001040056	chr16,chr16,chr16,chr16	-,-,+,-	MAPK3,MAPK3,LOC100271831,MAPK3	-1712,-1712,-10960,-1712
chr1:236030962-236031531	chr1	+	236031065	236031449	True	NM_000081,NM_003272	chr1,chr1	-,+	LYST,GPR137B	-845,274382
chr1:40780674-40781019	chr1	+	40780711	40780935	True	NM_005857,NM_001852	chr1,chr1	+,-	ZMPSTE24,COL9A2	-57029,2054
chr1:6548961-6549345	chr1	+	6549065	6549365	True	NM_001042665,NM_001042664,NM_020631,NM_001042663,NM_031475	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	PLEKHG5,PLEKHG5,PLEKHG5,PLEKHG5,ESPN	-3051,1325,2445,8169,-64268
chr4:56813132-56814811	chr4	+	56813422	56814701	True	NM_006681,NM_025009	chr4,chr4	-,+	NMU,CEP135	-310957,335
chr1:200589971-200591264	chr1	+	200590127	200590959	True	NM_014875,NM_203459	chr1,chr1	-,+	KIF14,CAMSAP1L1	-265,117726
chr15:99194633-99195160	chr15	+	99194805	99195195	True	NM_182562,NM_000875	chr15,chr15	-,+	FAM169B,IGF1R	-137194,-2095
chr11:111406242-111407108	chr11	+	111406305	111407144	True	NM_178834,NM_017589	chr11,chr11	+,-	LAYN,BTG4	4088,-23241
chr7:138462282-138463285	chr7	+	138462509	138463327	True	NM_130841,NM_001085429	chr7,chr7	-,+	ATP6V0A4,TMEM213	-3727,19411
chr18:2656751-2657872	chr18	+	2656949	2657803	True	NR_033754,NM_015295	chr18,chr18	-,+	LOC645158,SMCHD1	-3718,-1115
chr7:102255962-102256601	chr7	+	102256134	102256600	True	NM_001079877,NM_001031618,NM_006989	chr7,chr7,chr7	-,+,-	RASA4,SPDYE2,RASA4	655,34171,655
chr7:102255962-102256601	chr7	+	102157155	102157621	False	NM_001031618,NM_006234	chr7,chr7	+,-	SPDYE2,POLR2J	34057,-37774
chr18:33647176-33647501	chr18	+	33647184	33647522	True	NM_018170,NM_018255	chr18,chr18	-,+	RPRD1A,ELP2	21,62364
chr15:41625337-41625839	chr15	+	41625370	41625837	True	NM_007280,NM_018454,NM_001129897,NM_016359	chr15,chr15,chr15,chr15	-,+,+,+	OIP5,NUSAP1,NUSAP1,NUSAP1	-551,-495,-495,-495
chr5:169932179-169933333	chr5	+	169932239	169933359	True	NM_001034837,NM_004137,NM_014592	chr5,chr5,chr5	+,-,+	KCNIP1,KCNMB1,KCNIP1	-1242,-115601,-1242
chr17:59928511-59929883	chr17	+	59928619	59929633	True	NM_032043,NM_018488	chr17,chr17	-,+	BRIP1,TBX4	11343,-394864
chr9:99839497-99839713	chr9	+	99839592	99839738	True	NR_002942,NM_001045477	chr9,chr9	-,+	LOC340508,FAM22G	4539,-148357
chr1:3814994-3815973	chr1	+	3815371	3815941	True	NR_024455,NM_207356	chr1,chr1	+,-	LOC100133612,C1orf174	1026,966
chr6:108486571-108486808	chr6	+	108486576	108486803	True	NM_003269,NM_014028	chr6,chr6	+,-	NR2E1,OSTM1	411,-90635
chr14:24562907-24563222	chr14	+	24562956	24563262	True	NM_001018073,NM_006177,NM_004563	chr14,chr14,chr14	+,-,+	PCK2,NRL,PCK2	220,-9124,220
chr2:49254708-49256317	chr2	+	49255179	49256362	True	NM_000145,NM_006872	chr2,chr2	-,+	FSHR,GTF2A1L	125361,-410293
chr4:113223546-113225077	chr4	+	113223558	113224859	True	NM_001102406,NM_052864,NM_025144	chr4,chr4,chr4	+,-,+	ALPK1,TIFA,ALPK1	-5110,-16499,-5110
chr2:55494093-55494451	chr2	+	55494194	55494296	True	NM_001005369,NR_027258,NM_002453	chr2,chr2,chr2	-,+,-	MTIF2,PRORSD1P,MTIF2	2079,15158,2148
chr14:32563099-32564709	chr14	+	32563192	32564473	True	NR_027263,NM_001173	chr14,chr14	-,+	C14orf128,ARHGAP5	-17287,-16757
chr16:4853130-4853548	chr16	+	4853160	4853571	True	NM_024589,NR_029455	chr16,chr16	-,+	ROGDI,LOC440335	-486,-7832
chr10:92638839-92640204	chr10	+	92639085	92640084	True	NM_019860,NM_001104546,NM_006413	chr10,chr10,chr10	-,+,+	HTR7,RPP30,RPP30	-21414,-7427,-7427
chr7:126893139-126893462	chr7	+	126893141	126893456	True	NR_028041,NM_000845,NM_001127323,NM_001662	chr7,chr7,chr7,chr7	-,-,-,+	GRM8,GRM8,GRM8,ARF5	-9572,-9572,-713,334949
chr17:8240729-8242451	chr17	+	8241090	8242384	True	NR_024447,NM_153007	chr17,chr17	-,+	LOC100128288,ODF4	21525,803
chr3:25468322-25468724	chr3	+	25468338	25468690	True	NM_016152,NM_000965,NM_001068	chr3,chr3,chr3	+,+,-	RARB,RARB,TOP2B	1063,1143,237149
chr22:29076479-29077663	chr22	+	29076603	29077313	True	NM_001145418,NM_172002	chr22,chr22	-,+	TTC28,HSCB	-750,60729
chr3:112566488-112567595	chr3	+	112566552	112567553	True	NM_001008784,NM_001199215,NM_014170	chr3,chr3,chr3	-,-,+	CD200R1L,CD200R1L,GTPBP8	-1755,-1755,142246
chr21:43786326-43786661	chr21	+	43786340	43786713	True	NM_003225,NM_001001895	chr21,chr21	-,+	TFF1,UBASH3A	-16,37305
chr17:17938397-17939609	chr17	+	17938674	17939569	True	NM_024052,NM_145691	chr17,chr17	+,-	C17orf39,ATPAF2	3041,2970
chr17:19998375-19998960	chr17	+	19998397	19998879	True	NM_001033553,NM_152904,NM_007202	chr17,chr17,chr17	+,+,-	SPECC1,SPECC1,AKAP10	-8122,-8122,-117268
chr6:39288196-39289002	chr6	+	39288239	39288847	True	NM_001135105,NM_032115,NM_001135107,NM_001135106,NM_001135111,NM_031460,NM_002062	chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,-,-,-,+	KCNK16,KCNK16,KCNK16,KCNK16,KCNK17,KCNK17,GLP1R	1533,1533,1533,1533,-6002,-6003,-271734
chr19:51536591-51536921	chr19	+	51536890	51536970	True	NM_145894,NM_145895,NM_001136032,NM_019598,NM_001167605,NM_006853,NM_144947,NM_014441	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,+	KLK12,KLK12,KLK11,KLK12,KLK11,KLK11,KLK11,SIGLEC9	1228,1228,-7018,1228,-5600,-5600,-6005,91166
chr4:20282614-20283067	chr4	+	20282781	20283085	True	NM_147181,NM_004787	chr4,chr4	-,+	KCNIP4,SLIT2	569256,-27612
chr16:3544846-3545368	chr16	+	3544932	3545412	True	NM_015041,NM_001080524	chr16,chr16	+,-	CLUAP1,C16orf90	5550,59
chr11:73665529-73666512	chr11	+	73666026	73666305	True	NM_153614,NM_003355	chr11,chr11	+,-	DNAJB13,UCP2	-4715,27641
chr3:45065282-45066170	chr3	+	45065523	45066199	True	NM_003278,NM_016598	chr3,chr3	+,-	CLEC3B,ZDHHC3	1559,-47849
chr17:40117848-40118393	chr17	+	40117932	40118414	True	NM_033133,NM_198830	chr17,chr17	+,-	CNP,ACLY	344,-42660
chr7:191017-191268	chr7	+	191046	191290	True	NM_002607,NM_020223	chr7,chr7	-,+	PDGFA,FAM20C	368241,1678
chr12:124071056-124071400	chr12	+	124071188	124071451	True	NM_001414,NM_006815	chr12,chr12	-,+	EIF2B1,TMED2	46925,-2174
chr20:4126301-4127637	chr20	+	4126635	4127567	True	NM_175839,NM_000678,NM_175840,NM_175841,NM_175842	chr20,chr20,chr20,chr20,chr20	+,-,+,+,+	SMOX,ADRA1D,SMOX,SMOX,SMOX	1882,102142,1882,1882,1882
chr6:160113655-160113872	chr6	+	160113688	160113822	True	NM_001024466,NM_001024465,NM_152858,NM_000636	chr6,chr6,chr6,chr6	-,-,+,-	SOD2,SOD2,WTAP,SOD2	581,581,34329,581
chr15:50541093-50542736	chr15	+	50541115	50542525	True	NM_002112,NM_003645	chr15,chr15	-,+	HDC,SLC27A2	15687,-66780
chr19:1440414-1441090	chr19	+	1440459	1441133	True	NM_152482,NM_005883,NM_001018	chr19,chr19,chr19	-,+,+	C19orf25,APC2,RPS15	38145,9014,-2147
chr19:11894567-11895827	chr19	+	11894961	11895732	True	NM_152356,NM_001080493	chr19,chr19	+,-	ZNF491,ZNF823	13658,-45201
chr2:31803872-31804937	chr2	+	31804356	31804827	True	NM_014600,NM_000348	chr2,chr2	+,-	EHD3,SRD5A2	-347527,1270
chr9:139303174-139303791	chr9	+	139303273	139303640	True	NM_006643,NM_015160,NM_001039707,NM_001039708	chr9,chr9,chr9,chr9	-,+,-,-	SDCCAG3,PMPCA,SDCCAG3,SDCCAG3	1473,1475,1473,1473
chr20:24451803-24452875	chr20	+	24451975	24452912	True	NM_024893,NM_178311	chr20,chr20	+,-	TMEM90B,GGTLC1	-2193,-482559
chr8:36671456-36672796	chr8	+	36671496	36672572	True	NM_001031836,NR_003671	chr8,chr8	+,-	KCNU1,LOC728024	-29707,933042
chr1:52603481-52604253	chr1	+	52603649	52603789	True	NM_015913,NM_007324,NM_007323,NM_004799	chr1,chr1,chr1,chr1	-,+,+,+	TXNDC12,ZFYVE9,ZFYVE9,ZFYVE9	-82602,4256,4256,4256
chr3:42727344-42727942	chr3	+	42727375	42727929	True	NM_152393,NR_027753	chr3,chr3	+,-	KBTBD5,HHATL	-415,15134
chr3:9772580-9772941	chr3	+	9772599	9772861	True	NM_004634,NM_003656,NM_001003694	chr3,chr3,chr3	+,-,+	BRPF1,CAMK1,BRPF1	572,38857,572
chr6:32632209-32632512	chr6	+	32632242	32632332	True	NM_002122,NM_002123	chr6,chr6	+,-	HLA-DQA1,HLA-DQB1	-27110,2184
chr3:52233044-52233443	chr3	+	52233050	52233492	True	NM_017442,NM_199166,NM_000688	chr3,chr3,chr3	-,+,+	TLR9,ALAS1,ALAS1	26737,-985,-957
chr19:19736313-19736985	chr19	+	19736629	19737034	True	NM_004720,NM_025245,NM_033204	chr19,chr19,chr19	-,-,+	LPAR2,PBX4,ZNF101	2055,-7190,42628
chr15:90041410-90042060	chr15	+	90041564	90042047	True	NM_016321,NM_152259	chr15,chr15	-,+	RHCG,C15orf42	-1765,76770
chr19:50266448-50267249	chr19	+	50266459	50267055	True	NM_130787,NM_014203,NM_021733	chr19,chr19,chr19	+,+,-	AP2A1,AP2A1,TSKS	3124,3124,56
chr21:30670481-30670776	chr21	+	30670538	30670804	True	NM_206866,NR_027655,NM_001186,NM_006585	chr21,chr21,chr21,chr21	+,+,+,-	BACH1,BACH1,BACH1,CCT8	932,6755,415,-224528
chr14:52117519-52117719	chr14	+	52117518	52117740	True	NR_037676,NM_152330	chr14,chr14	-,+	C14orf82,FRMD6	772,835
chr5:124224040-124225112	chr5	+	124224086	124225111	True	NM_004384,NM_020747	chr5,chr5	+,-	CSNK1G3,ZNF608	-1376344,-143281
chr17:46176964-46177355	chr17	+	46176979	46177182	True	NM_001127228,NM_152244,NM_006807,NM_013323	chr17,chr17,chr17,chr17	-,+,-,+	CBX1,SNX11,CBX1,SNX11	1756,7737,1433,7764
chr3:197792423-197793220	chr3	+	197792569	197793216	True	NR_003291,NM_001145248	chr3,chr3	-,+	LOC348840,FAM157A	14385,86020
chrX:135960758-135961603	chrX	+	135960948	135961650	True	NM_001164803,NR_002735,NM_002139,NM_000074,NR_028477,NR_028476	chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,+,-,-	RBMX,SNORD61,RBMX,CD40LG,RBMX,RBMX	1343,-9,1343,-230676,1343,1343
chr8:139926480-139927055	chr8	+	139926598	139927018	True	NM_017444,NM_152888	chr8,chr8	+,-	CHRAC1,COL22A1	1594382,-362
chr2:70998164-70999174	chr2	+	70998182	70999220	True	NM_017482,NM_001617,NM_017488,NM_001185054,NM_001185055,NM_012476	chr2,chr2,chr2,chr2,chr2,chr2	-,-,-,-,-,+	ADD2,ADD2,ADD2,ADD2,ADD2,VAX2	-2807,-2807,-2807,-3335,-2807,128499
chr14:104314964-104315739	chr14	+	104315206	104315569	True	NM_153046,NM_015316	chr14,chr14	+,-	TDRD9,PPP1R13B	79247,-1279
chr12:6662910-6663637	chr12	+	6662942	6663593	True	NM_001039670,NM_001193457,NM_080730,NR_036467,NM_002046	chr12,chr12,chr12,chr12,chr12	-,-,-,-,+	IFFO1,IFFO1,IFFO1,IFFO1,GAPDH	1706,1706,1706,1706,-19336
chr2:233413794-233415030	chr2	+	233413794	233415028	True	NM_005199,NM_004846,NM_145702	chr2,chr2,chr2	+,+,-	CHRNG,EIF4E2,TIGD1	-9414,328,248
chr13:77564163-77565224	chr13	+	77564420	77565270	True	NM_006493,NM_012158	chr13,chr13	+,-	CLN5,FBXL3	788,36111
chr19:823691-824152	chr19	+	823718	823900	True	NM_001700,NM_024888	chr19,chr19	+,-	AZU1,LPPR3	3930,-1766
chrX:100230916-100232663	chrX	+	100230958	100231975	True	NM_212559,NM_001012990,NM_001162491,NM_001162490	chrX,chrX,chrX,chrX	-,+,+,+	XKRX,ARL13A,ARL13A,ARL13A	-47060,-6312,-6312,-6312
chr17:71189774-71190107	chr17	+	71189781	71190054	True	NM_018714,NM_001098832	chr17,chr17	+,-	COG1,FAM104A	-659,38530
chr22:36816164-36816387	chr22	+	36816257	36816401	True	NM_145343,NM_002473	chr22,chr22	+,-	APOL1,MYH9	-167191,-32194
chr19:29395590-29396362	chr19	+	29395604	29396292	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	59745,307894
chr9:72433111-72434683	chr9	+	72433389	72434688	True	NM_001099666,NM_001010940	chr9,chr9	-,+	PTAR1,C9orf135	-58513,1042
chr7:56673666-56674384	chr7	+	56673701	56674203	True	NR_029420,NR_026929	chr7,chr7	-,+	LOC650226,DKFZp434L192	-157633,-109836
chr16:67218682-67219071	chr16	+	67218762	67218950	True	NM_001950,NM_178516,NM_001040715	chr16,chr16,chr16	+,-,-	E2F4,EXOC3L1,KIAA0895L	7117,5207,-879
chr14:27065672-27066051	chr14	+	27065772	27066002	True	NM_002515,NM_006489,NR_036193,NM_006491	chr14,chr14,chr14,chr14	-,-,+,-	NOVA1,NOVA1,MIR4307,NOVA1	1008,1008,311845,1008
chr5:75698437-75698793	chr5	+	75698533	75698842	True	NM_006633,NM_004101	chr5,chr5	+,-	IQGAP2,F2RL2	306,220448
chr14:54910746-54911795	chr14	+	54910824	54911815	True	NM_005776,NM_005192	chr14,chr14	-,+	CNIH,CDKN3	-2676,-47202
chr2:178891108-178892339	chr2	+	178891745	178892340	True	NM_016953,NM_152945	chr2,chr2	-,+	PDE11A,RBM45	45193,84841
chr16:4836119-4836649	chr16	+	4836118	4836179	True	NR_029454,NR_029455,NM_144605,NM_001154458,NR_029453	chr16,chr16,chr16,chr16,chr16	+,+,-,-,+	LOC440335,LOC440335,SEPT12,SEPT12,LOC440335	2277,9199,2271,2271,2218
chr17:38501082-38501550	chr17	+	38501226	38501464	True	NM_001024809,NM_152219	chr17,chr17	+,-	RARA,GJD3	-3006,19531
chr1:47882986-47883255	chr1	+	47883028	47883206	True	NR_026878,NM_012186	chr1,chr1	-,+	MGC12982,FOXE3	17157,-1335
chr7:47990228-47990450	chr7	+	47990318	47990480	True	NM_138295,NM_001100159	chr7,chr7	-,+	PKD1L1,C7orf57	-2247,84636
chr14:100064029-100064661	chr14	+	100064109	100064659	True	NM_032425,NM_001144995	chr14,chr14	+,-	HHIPL1,CCDC85C	46820,6118
chr1:44499477-44500366	chr1	+	44499848	44500412	True	NM_001024845,NM_152499	chr1,chr1	-,+	SLC6A9,CCDC24	-2714,-42619
chr19:2249794-2250282	chr19	+	2249844	2249916	True	NR_036207,NM_144616,NM_000479	chr19,chr19,chr19	+,-,+	MIR4321,JSRP1,AMH	721,6556,-782
chr21:33244132-33244757	chr21	+	33244220	33244738	True	NM_020706,NM_014586	chr21,chr21	-,+	SCAF4,HUNK	-139789,889
chr8:57026074-57026394	chr8	+	57026083	57026331	True	NM_005372,NM_001011667	chr8,chr8	-,+	MOS,CHCHD7	260,97983
chr19:46284731-46285558	chr19	+	46284737	46285507	True	NM_001081563,NM_001081562,NM_004409,NM_001081560,NM_004497	chr19,chr19,chr19,chr19,chr19	-,-,-,-,+	DMPK,DMPK,DMPK,DMPK,FOXA3	-876,358,358,358,82010
chr20:57553024-57554309	chr20	+	57553046	57554338	True	NM_001336,NM_198976	chr20,chr20	-,+	CTSZ,TH1L	28021,1972
chr19:35719111-35719540	chr19	+	35719214	35719504	True	NM_152481,NM_015925	chr19,chr19	-,+	FAM187B,LSR	174,20054
chr19:53323889-53324454	chr19	+	53324163	53324437	True	NR_036599,NR_036600,NM_152473,NM_006969	chr19,chr19,chr19,chr19	-,-,+,-	ZNF28,ZNF28,HERV-V1,ZNF28	535,535,192906,535
chr19:53323889-53324454	chr19	+	53360373	53360423	False	NM_199132,NM_152473,NM_001008801	chr19,chr19,chr19	-,+,-	ZNF468,HERV-V1,ZNF468	529,156920,529
chr3:127350187-127350730	chr3	+	127350187	127350586	True	NM_015720,NM_001142646	chr3,chr3	+,-	PODXL2,TPRA1	-2199,-40619
chr11:66611635-66612424	chr11	+	66611639	66612259	True	NM_001032279,NM_005133,NM_022172	chr11,chr11,chr11	+,+,-	RCE1,RCE1,PC	-807,-807,63131
chr3:75482257-75484026	chr3	+	75482312	75483830	True	NR_031714,NR_024241	chr3,chr3	+,-	MIR1324,FAM86DP	196083,486
chr11:66487905-66488274	chr11	+	66487909	66488275	True	NM_024650,NM_006946	chr11,chr11	+,-	C11orf80,SPTBN2	23931,645
chr7:26330145-26330489	chr7	+	26330145	26330372	True	NM_031243,NM_013322,NM_001199835,NR_037670	chr7,chr7,chr7,chr7	-,+,+,+	HNRNPA2B1,SNX10,SNX10,SNX10	-89732,1142,1142,1142
chr10:97352536-97353060	chr10	+	97352677	97353065	True	NM_024991,NM_001098175	chr10,chr10	-,+	SORBS1,ENTPD1	-31506,118470
chr16:3017150-3017430	chr16	+	3017182	3017268	True	NM_172229,NM_152341,NM_004203,NM_024507	chr16,chr16,chr16,chr16	+,+,-,+	KREMEN2,PAQR4,PKMYT1,KREMEN2	-3016,2073,13322,-3016
chr15:33356863-33357129	chr15	+	33356950	33357166	True	NM_001036,NM_001103184	chr15,chr15	+,-	RYR3,FMN1	246010,2969
chr11:64569382-64569626	chr11	+	64569495	64569583	True	NM_004579,NM_006244,NM_130799,NM_000244,NM_130804,NM_130803,NM_130802,NM_130801,NM_130800	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,+,-,-,-,-,-,-,-	MAP4K2,PPP2R5B,MEN1,MEN1,MEN1,MEN1,MEN1,MEN1,MEN1	1180,122559,8655,8655,9233,9233,8680,8502,8502
chr11:102600031-102600299	chr11	+	102600030	102600272	True	NM_001080463,NM_002424	chr11,chr11	+,-	DYNC2H1,MMP8	379887,-4345
chr5:154231685-154232682	chr5	+	154231922	154232313	True	NM_004779,NM_032385	chr5,chr5	+,-	CNOT8,C5orf4	5884,-1709
chr2:70528097-70528669	chr2	+	70528157	70528643	True	NM_032822,NM_003096,NM_016297	chr2,chr2,chr2	-,-,+	FAM136A,SNRPG,PCYOX1	627,-7288,-42977
chr1:202445991-202447089	chr1	+	202446296	202446912	True	NM_014176,NM_032104	chr1,chr1	-,+	UBE2T,PPP1R12B	-135202,-14478
chr4:77330906-77332409	chr4	+	77331129	77332223	True	NM_001042784,NM_020859	chr4,chr4	-,+	CCDC158,SHROOM3	-2671,24029
chr5:159344470-159345179	chr5	+	159344548	159345220	True	NM_000679,NM_052927	chr5,chr5	+,-	ADRA1B,PWWP2A	-859,201282
chr1:28562075-28562539	chr1	+	28562163	28562508	True	NM_178191,NM_016311,NM_014280,NM_178190	chr1,chr1,chr1,chr1	+,+,-,+	ATPIF1,ATPIF1,DNAJC8,ATPIF1	93,93,-2621,93
chr12:70004804-70006727	chr12	+	70004995	70006747	True	NM_201550,NM_001198842	chr12,chr12	-,+	LRRC10,CCT2	-53,-25596
chr17:34757537-34758121	chr17	+	34757617	34758094	True	NM_001123392,NM_004773	chr17,chr17	-,+	TBC1D3H,ZNHIT3	-567,84378
chr17:34757537-34758121	chr17	-	36282937	36282996	False	NM_032258,NR_024178,NM_001123391	chr17,chr17,chr17	+,-,+	TBC1D3F,LOC284100,TBC1D3	963,-38574,963
chr17:34757537-34758121	chr17	+	34809066	34809125	False	NM_001001418,NM_004773,NM_001040282	chr17,chr17,chr17	-,+,-	TBC1D3C,ZNHIT3,TBC1D3G	-975,33347,-963
chr17:34757537-34758121	chr17	+	34504958	34505017	False	NM_001001417,NM_001001435	chr17,chr17	-,+	TBC1D3B,CCL4L1	-970,33450
chr17:34757537-34758121	chr17	+	34593002	34593061	False	NM_001001435,NM_001001418	chr17,chr17	+,-	CCL4L1,TBC1D3C	46972,-975
chr10:17234065-17234534	chr10	+	17234070	17234578	True	NM_003380,NM_004412	chr10,chr10	+,-	VIM,TRDMT1	35679,9542
chr2:128847807-128848593	chr2	+	128848175	128848562	True	NM_024545,NM_020120,NR_027671	chr2,chr2,chr2	-,+,+	SAP130,UGGT1,UGGT1	-63306,191,219
chr15:59226270-59226507	chr15	+	59226299	59226508	True	NM_001013843,NM_024755,NM_017610	chr15,chr15,chr15	-,-,+	SLTM,SLTM,RNF111	-447,-447,53356
chr2:53999402-54000658	chr2	+	53999689	54000248	True	NM_001201965,NM_001008708	chr2,chr2	-,+	ASB3,CHAC2	13797,-4812
chr13:80081702-80082779	chr13	+	80081744	80082502	True	NM_019080,NM_022118	chr13,chr13	+,-	NDFIP2,RBM26	-26545,-101821
chr5:99383458-99384699	chr5	+	99383522	99384734	True	NM_198507,NR_027503	chr5,chr5	+,-	FAM174A,LOC100133050	486389,339274
chrX:119594728-119596097	chrX	+	119594917	119596057	True	NM_013995,NM_002294,NM_001122606,NM_012069	chrX,chrX,chrX,chrX	-,-,-,+	LAMP2,LAMP2,LAMP2,ATP1B4	7205,7205,7205,-99041
chr10:135377960-135378507	chr10	+	135377971	135378409	True	NM_130784,NR_033789,NM_001143763,NM_001143764,NM_000773	chr10,chr10,chr10,chr10,chr10	-,-,-,-,+	SYCE1,SPRNP1,SYCE1,SYCE1,CYP2E1	4517,5103,779,779,-37155
chr2:216299543-216300398	chr2	+	216299876	216300396	True	NM_004044,NM_002026,NM_054034,NM_212476,NM_212474,NM_212482,NM_212478	chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-,-	ATIC,FN1,FN1,FN1,FN1,FN1,FN1	-123248,445,445,445,445,445,445
chr17:61849972-61850584	chr17	+	61849972	61850607	True	NM_203499,NM_007372,NM_020198	chr17,chr17,chr17	+,+,-	DDX42,DDX42,CCDC47	959,959,532
chr22:50780857-50781249	chr22	+	50780946	50781226	True	NM_001001794,NM_014678	chr22,chr22	-,+	FAM116B,PPP6R2	-15457,533
chr17:41925532-41926019	chr17	+	41925643	41926059	True	NR_003562,NM_001168324,NM_001168323,NM_001168322,NM_145273	chr17,chr17,chr17,chr17,chr17	-,+,+,+,+	MPP3,CD300LG,CD300LG,CD300LG,CD300LG	-15096,-1178,-1178,-1178,-1178
chr5:168007858-168009745	chr5	+	168007894	168009607	True	NM_024594,NR_031721	chr5,chr5	-,+	PANK3,MIR103-1AS	-1280,-20044
chr3:38205549-38205930	chr3	+	38205558	38205978	True	NM_005109,NR_024024	chr3,chr3	+,-	OXSR1,ACAA1	1047,-26825
chr2:87247270-87248330	chr2	+	87247359	87248306	True	NM_001032392,NM_002665,NM_001024457	chr2,chr2,chr2	-,-,+	PLGLB1,PLGLB2,RGPD1	713,717,-102672
chr2:87247270-87248330	chr2	-	88048272	88049217	False	NM_001032392,NM_001078170,NM_002665	chr2,chr2,chr2	+,-,+	PLGLB1,RGPD2,PLGLB2	-713,76119,-717
chr2:234553087-234554263	chr2	+	234553289	234553844	True	NM_019075,NM_018218	chr2,chr2	+,-	UGT1A10,USP40	-8217,-79053
chr14:21539301-21539713	chr14	+	21539353	21539699	True	NM_016423,NM_018071	chr14,chr14	-,+	ZNF219,ARHGEF40	27159,-877
chr10:5240425-5240758	chr10	+	5240429	5240641	True	NR_027916,NM_001818	chr10,chr10	-,+	AKR1CL1,AKR1C4	-13279,-1688
chr2:167310281-167310758	chr2	+	167310295	167310759	True	NM_001079810,NM_002976	chr2,chr2	+,-	XIRP2,SCN7A	434237,32779
chr6:56031219-56031730	chr6	+	56031471	56031779	True	NM_152731,NM_030820	chr6,chr6	+,-	BEND6,COL21A1	787993,80649
chr4:151008349-151009712	chr4	+	151008349	151009537	True	NM_001040261,NM_001040260,NM_001199282,NR_036614	chr4,chr4,chr4,chr4	+,+,-,+	DCLK2,DCLK2,LRBA,DCLK2	-8978,-8978,926949,-8978
chr9:90111034-90111586	chr9	+	90111213	90111539	True	NR_036691,NM_004938	chr9,chr9	-,+	LOC494127,DAPK1	-411073,1216
chr9:137219411-137219677	chr9	+	137219410	137219668	True	NM_002957,NR_023344	chr9,chr9	+,-	RXRA,RNU6ATAC	-1146,-189724
chr3:195887432-195888274	chr3	+	195887482	195887729	True	NR_034088,NM_001039617	chr3,chr3	+,-	LOC401109,ZDHHC19	-18026,50632
chr7:99935972-99936984	chr7	+	99936393	99936455	True	NR_036570,NR_003613,NR_036569	chr7,chr7,chr7	+,-,+	PILRB,PMS2P1,PILRB	-2756,-2463,-2756
chr11:563676-564700	chr11	+	563874	564552	True	NR_029623,NM_173573,NM_001143994,NM_001143993,NM_003475	chr11,chr11,chr11,chr11,chr11	-,-,+,+,+	MIR210,C11orf35,RASSF7,RASSF7,RASSF7	3696,-3095,-2475,-2954,-2475
chr4:57522666-57522986	chr4	+	57522820	57522936	True	NM_139211,NM_001145459,NM_206919	chr4,chr4,chr4	-,-,+	HOPX,HOPX,ARL9	-132,-132,-151496
chr2:74174761-74175050	chr2	+	74174793	74175070	True	NM_080918,NM_003584	chr2,chr2	+,-	DGUOK,DUSP11	-20891,-167509
chr5:70362871-70363480	chr5	+	70362996	70363284	True	NM_022877,NM_001515	chr5,chr5	+,-	SMN2,GTF2H2	-142279,263
chr5:70362871-70363480	chr5	-	68856266	68856554	False	NR_027439,NM_001042490,NM_001098728	chr5,chr5,chr5	-,+,+	LOC100272216,GTF2H2D,GTF2H2C	72524,-243,-266
chr5:70362871-70363480	chr5	-	69711413	69711701	False	NR_033417,NR_033968	chr5,chr5	+,-	GTF2H2B,LOC100049076	-267,139499
chr1:93414520-93414922	chr1	+	93414656	93414721	True	NR_002444,NM_001006605	chr1,chr1	+,-	SNORA66,FAM69A	-108438,12409
chr1:207935981-207936527	chr1	+	207936065	207936481	True	NM_172361,NR_029832	chr1,chr1	+,-	CD46,MIR29C	-10733,38853
chr17:46608215-46608872	chr17	+	46608224	46608892	True	NM_002144,NR_033201	chr17,chr17	-,+	HOXB1,LOC404266	38,58930
chr9:135229737-135230082	chr9	+	135229801	135230071	True	NM_207417,NM_015046	chr9,chr9	+,-	C9orf171,SETX	55539,351
chr12:122709856-122710116	chr12	+	122709955	122710083	True	NM_030765,NR_024600,NM_138929,NM_019887,NR_024601	chr12,chr12,chr12,chr12,chr12	+,-,-,-,-	B3GNT4,DIABLO,DIABLO,DIABLO,DIABLO	-21780,2035,2035,2035,2035
chr6:36097452-36097979	chr6	+	36097583	36097975	True	NM_002754,NM_052961	chr6,chr6	+,-	MAPK13,SLC26A8	286,-105170
chr1:162370212-162372072	chr1	+	162370856	162372029	True	NM_001085375,NM_053282	chr1,chr1	+,-	C1orf226,SH2D1B	-19389,9949
chr10:115939622-115940217	chr10	+	115939722	115940212	True	NR_031747,NM_198795,NM_018017	chr10,chr10,chr10	-,+,-	MIR2110,TDRD1,C10orf118	-5784,-746,-5358
chr17:60214978-60215713	chr17	+	60215024	60215652	True	NM_001144933,NM_005121	chr17,chr17	+,-	EFCAB3,MED13	231926,-72381
chr17:43508092-43508309	chr17_ctg5_hap1	+	123221	123301	False	NM_001113738,NM_174919,NM_199282	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	+,-,-	ARL17A,ARHGAP27,ARHGAP27	72419,2156,-5085
chr17:43508092-43508309	chr17	+	43508096	43508176	True	NR_024435,NM_174919,NM_199282	chr17,chr17,chr17	+,-,-	LOC100133991,ARHGAP27,ARHGAP27	-168589,2156,-5084
chr2:202645695-202646031	chr2	+	202645816	202646048	True	NM_001135745,NM_139158,NM_020919	chr2,chr2,chr2	-,+,-	ALS2,CDK15,ALS2	-5,25149,-5
chr1:215217983-215218233	chr1	+	215218039	215218217	True	NM_001017425,NM_005401	chr1,chr1	+,-	KCNK2,PTPN14	38342,-493015
chr7:72971285-72971503	chr7	+	72971315	72971463	True	NM_001077621,NR_036682,NM_001707,NM_001197244	chr7,chr7,chr7,chr7	+,-,-,-	VPS37D,BCL7B,BCL7B,BCL7B	110710,189,652,652
chr20:62250111-62250692	chr20	+	62250166	62250564	True	NM_016434,NM_012384	chr20,chr20	+,-	RTEL1,GMEB2	38598,7867
chr17:6900131-6900343	chr17	+	6900130	6900330	True	NM_000697,NR_029712	chr17,chr17	+,-	ALOX12,MIR195	-797,20740
chr22:44568193-44568723	chr22	+	44568222	44568764	True	NR_024426,NR_024427,NM_022141,NM_001099294,NM_001137605,NM_001137606,NR_024428	chr22,chr22,chr22,chr22,chr22,chr22,chr22	+,+,+,-,+,+,+	PARVG,PARVG,PARVG,KIAA1644,PARVG,PARVG,PARVG	8005,71,8005,140017,71,8492,8451
chr10:71034996-71036269	chr10	+	71035226	71036097	True	NM_001057,NM_033497,NM_033500,NM_033498	chr10,chr10,chr10,chr10	-,+,+,+	TACR2,HK1,HK1,HK1	140635,-5529,-5529,-5529
chr16:71602112-71603789	chr16	+	71602145	71603736	True	NM_000353,NM_001166395	chr16,chr16	-,+	TAT,CHST4	7312,-42042
chr22:18510695-18511421	chr22	+	18510961	18511353	True	NM_001136004,NM_015241,NR_024417,NM_001122731	chr22,chr22,chr22,chr22	-,-,+,-	MICAL3,MICAL3,FLJ41941,MICAL3	-3636,-3636,797,-3636
chr21:45586325-45586691	chr21	+	45586331	45586731	True	NM_198155,NM_015259	chr21,chr21	+,-	C21orf33,ICOSLG	-32888,74153
chr13:22243724-22244089	chr13	+	22243741	22243965	True	NM_152726,NM_002010	chr13,chr13	-,+	EFHA1,FGF9	-65386,1249
chr4:113607971-113608421	chr4	+	113607973	113608219	True	NM_015454,NR_029857	chr4,chr4	+,-	LARP7,MIR302B	-49412,-38260
chr22:31063144-31063370	chr22	+	31063184	31063364	True	NM_152511,NM_030758	chr22,chr22	-,+	DUSP18,OSBP2	558,27428
chr8:145979616-145979994	chr8	+	145979667	145980031	True	NM_138367,NM_213605	chr8,chr8	-,+	ZNF251,ZNF517	989,44229
chr19:35940622-35940978	chr19	+	35940621	35941009	True	NM_005306,NM_207392	chr19,chr19	+,-	FFAR2,KRTDAP	-55,40397
chr2:87754869-87755389	chr2	+	87754913	87755425	True	NM_001078170,NR_024206,NR_024204,NR_024205	chr2,chr2,chr2,chr2	-,+,+,+	RGPD2,NCRNA00152,NCRNA00152,NCRNA00152	369911,10,10,10
chr2:87754869-87755389	chr2	-	112252200	112252711	False	NR_024373,NM_207003,NR_015395	chr2,chr2,chr2	-,+,-	LOC541471,BCL2L11,LOC541471	31,-373760,31
chr19:58966856-58967149	chr19	+	58966919	58967123	True	NM_207395,NM_003433	chr19,chr19	+,-	ZNF324B,ZNF132	-3999,-15330
chr19:58966856-58967149	chr19	+	58982621	58982671	False	NM_017908,NM_003433,NM_014347	chr19,chr19,chr19	+,-,+	ZNF446,ZNF132,ZNF324	5123,-31032,-4260
chrX:99666458-99666731	chrX	+	99666569	99666776	True	NM_001105243,NM_001184880,NM_022144,NM_020766	chrX,chrX,chrX,chrX	-,-,+,-	PCDH19,PCDH19,TNMD,PCDH19	-1298,-1298,173013,-1298
chr7:29602150-29602384	chr7	+	29602149	29602358	True	NR_024278,NM_175887	chr7,chr7	-,+	LOC646762,PRR15	122447,1068
chr6:6321691-6322145	chr6	+	6321889	6322115	True	NM_000129,NM_004271	chr6,chr6	-,+	F13A1,LY86	-965,266818
chr6:43030924-43031382	chr6	+	43030971	43031275	True	NM_015950,NM_001168370,NM_014780,NM_201521,NM_201523,NM_201522,NM_138343	chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,+,+,+,+	MRPL2,CUL7,CUL7,KLC4,KLC4,KLC4,KLC4	-3729,-9288,-9288,-3650,-3393,-2840,-3650
chr2:237994873-237996292	chr2	+	237994881	237996296	True	NM_004369,NM_006710,NM_198189	chr2,chr2,chr2	-,+,+	COL6A3,COPS8,COPS8	326611,-848,-848
chr11:120968422-120969791	chr11	+	120968441	120969677	True	NM_012101,NM_005422	chr11,chr11	-,+	TRIM29,TECTA	-959578,3697
chr16:68680181-68681104	chr16	+	68680452	68681143	True	NM_018667,NM_001793	chr16,chr16	-,+	SMPD3,CDH3	-198043,-2352
chr19:48452302-48453164	chr19	+	48452695	48452791	True	NR_024219,NR_024221,NR_024218,NR_024217,NR_024216,NR_024220,NR_004437,NM_001128326	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,+,+,-	SNAR-C5,SNAR-C3,SNAR-C4,SNAR-C2,SNAR-A13,SNAR-C1,SNAR-A12,BSPH1	6147,761,-9952,6147,-4571,6147,-4571,42688
chr19:48452302-48453164	chr19	+	48458083	48458140	False	NR_024219,NR_024220,NR_024221,NR_024217,NR_024216,NR_004437,NM_001128326	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,+,-	SNAR-C5,SNAR-C1,SNAR-C3,SNAR-C2,SNAR-A13,SNAR-A12,BSPH1	798,798,-4585,798,-9959,-9959,37340
chr19:48452302-48453164	chr19	+	48415457	48415514	False	NR_024219,NR_024220,NR_024217,NR_024216,NM_003167,NR_004437,NR_004436,NR_004435	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,-,+,+,+	SNAR-C5,SNAR-C1,SNAR-C2,SNAR-A13,SULT2A1,SNAR-A12,SNAR-A2,SNAR-A1	793,793,793,-4577,-25803,-4577,6171,6171
chr19:48452302-48453164	chr19	+	48431225	48431282	False	NR_024219,NR_024220,NR_024223,NR_024224,NR_024225,NR_024226,NR_024227,NR_024228,NR_024229,NR_024215,NR_024214,NR_024217,NM_003167,NR_004436,NR_004435,NR_024242	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,+,+,+,+,+,+,+,-,+,+,+	SNAR-C5,SNAR-C1,SNAR-A5,SNAR-A7,SNAR-A11,SNAR-A9,SNAR-A6,SNAR-A8,SNAR-A10,SNAR-A4,SNAR-A3,SNAR-C2,SULT2A1,SNAR-A2,SNAR-A1,SNAR-A14	792,792,-4244,-4244,-4244,-4244,-4244,-4244,-4244,-4244,-4244,792,-41571,6155,6155,-4244
chr19:48452302-48453164	chr19	+	48441938	48441995	False	NR_024219,NR_024218,NR_024217,NR_024216,NR_024220,NM_003167,NR_004437,NR_004436,NR_004435	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,-,+,+,+	SNAR-C5,SNAR-C4,SNAR-C2,SNAR-A13,SNAR-C1,SULT2A1,SNAR-A12,SNAR-A2,SNAR-A1	-9918,802,-9918,6183,-9918,-52284,6183,-4555,-4555
chr9:139332673-139332949	chr9	+	139332777	139332977	True	NM_019892,NM_015160	chr9,chr9	-,+	INPP5E,PMPCA	1329,-27713
chr7:75117924-75118532	chr7	+	75118512	75118580	True	NM_001099415,NM_001099435	chr7,chr7	-,+	POM121C,SPDYE5	-2944,5718
chr7:75117924-75118532	chr7	+	66738841	66738909	False	NM_022906,NR_022007	chr7,chr7	+,-	STAG3L4,PMS2P4	28706,28547
chr7:75117924-75118532	chr7	-	102001224	102001292	False	NM_024653,NM_001146210	chr7,chr7	+,-	PRKRIP1,SPDYE6	35511,-4335
chr7:29523392-29525240	chr7	+	29523545	29525203	True	NM_001039936,NR_024278	chr7,chr7	+,-	CHN2,LOC646762	-4110,199601
chr10:30985981-30986490	chr10	+	30986043	30986524	True	NM_183058,NM_005204	chr10,chr10	-,+	LYZL2,MAP3K8	-67396,-263228
chr15:25442883-25443957	chr15	+	25443081	25443903	True	NR_003344,NR_003358,NR_003313,NR_003312,NR_003311,NR_003310,NM_130838,NR_003297,NR_003308,NR_003309,NR_003351,NR_003301,NR_003302,NR_003303,NR_003304,NR_003305,NR_003306,NR_003307	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,-,+,+,+,+,+,+,+,+,+,+,+	SNORD115-29,SNORD115-43,SNORD115-21,SNORD115-20,SNORD115-19,SNORD115-18,UBE3A,SNORD115-5,SNORD115-16,SNORD115-17,SNORD115-36,SNORD115-9,SNORD115-10,SNORD115-11,SNORD115-12,SNORD115-13,SNORD115-14,SNORD115-15	-8571,-8571,7505,7505,2566,2566,206800,-6566,691,2566,-8571,-6569,-6569,-8571,-6569,-4664,-3064,7505
chr9:136931522-136932023	chr9	+	136931822	136932018	True	NM_007371,NR_015427	chr9,chr9	-,+	BRD3,NCRNA00094	1173,-41312
chr3:5164324-5165717	chr3	+	5164457	5165379	True	NR_037903,NM_018184	chr3,chr3	-,+	LOC100507582,ARL8B	-216271,-578
chr15:85199993-85200352	chr15	+	85200086	85200352	True	NR_004859,NM_032856,NM_021077,NM_205858	chr15,chr15,chr15,chr15	+,-,-,-	SCAND2,WDR73,NMB,NMB	-25446,-2565,1500,1500
chr10:74713138-74713458	chr10	+	74713298	74713390	True	NM_152635,NM_032562	chr10,chr10	+,-	OIT3,PLA2G12B	-60017,1170
chr14:24834170-24834933	chr14	+	24834227	24834971	True	NM_001198966,NM_001136022,NM_001198965,NM_006871,NM_004554,NM_001198967	chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,-,+,+	NFATC4,NFATC4,NFATC4,RIPK3,NFATC4,NFATC4	3330,1173,2254,-24985,2254,1173
chr16:33363954-33364371	chr16	+	33364047	33364277	True	NR_033866,NM_001205265	chr16,chr16	-,+	LOC390705,TP53TG3B	-65345,-101978
chr16:33363954-33364371	chr16	+	32366900	32367080	False	NR_033866,NM_003414	chr16,chr16	-,+	LOC390705,ZNF267	-65598,-481872
chr3:121468381-121468806	chr3	+	121468515	121468749	True	NM_004487,NM_018456	chr3,chr3	-,+	GOLGB1,EAF2	-15,85284
chr1:171638999-171639796	chr1	+	171639094	171639779	True	NM_001007239,NM_000261	chr1,chr1	+,-	METTL13,MYOC	110981,-17321
chr22:25093834-25094181	chr22	+	25093838	25094032	True	NR_024593,NR_024494	chr22,chr22	-,+	POM121L10P,BCRP3	-38724,-65007
chr20:43753531-43754784	chr20	+	43753571	43754795	True	NM_080869,NM_145652,NM_002638	chr20,chr20,chr20	-,-,+	WFDC12,WFDC5,PI3	-465,-9768,48744
chr5:79950554-79950932	chr5	+	79950596	79950658	True	NM_001190470,NM_002439,NM_000791	chr5,chr5,chr5	-,+,-	MTRNR2L2,MSH3,DHFR	-3742,-353,192
chr5:35925216-35925898	chr5	+	35925240	35925766	True	NM_002185,NM_001042625	chr5,chr5	+,-	IL7R,CAPSL	-68300,13021
chr19:44288240-44288503	chr19	+	44288362	44288558	True	NM_181845,NM_002250	chr19,chr19	+,-	ZNF283,KCNN4	42914,-2953
chr7:39647358-39648059	chr7	+	39647627	39648074	True	NM_138701,NR_024390	chr7,chr7	-,+	C7orf11,LOC646999	526233,1011
chr12:52830090-52831897	chr12	+	52830325	52831765	True	NM_004693,NM_002284	chr12,chr12	-,+	KRT75,KRT86	-2215,-134727
chr3:125799834-125800869	chr3	+	125799931	125800803	True	NM_017836,NM_001008486,NM_001008485,NM_001012337	chr3,chr3,chr3,chr3	-,-,-,+	SLC41A3,SLC41A3,SLC41A3,ROPN1B	2381,2381,2381,-111963
chr17:71161569-71161848	chr17	+	71161602	71161774	True	NM_001098832,NM_001050	chr17,chr17	-,+	FAM104A,SSTR2	66809,-493
chr6:137241949-137242328	chr6	+	137241994	137242287	True	NR_027994,NM_001008783	chr6,chr6	-,+	NHEG1,SLC35D3	72131,1114
chr3:50360004-50361178	chr3	+	50360154	50361099	True	NM_007275,NM_007022,NM_033158,NM_003773	chr3,chr3,chr3,chr3	-,+,-,-	TUSC2,CYB561D2,HYAL2,HYAL2	4619,27197,127,127
chr3:32544345-32546066	chr3	+	32544406	32545490	True	NM_017801,NM_181472	chr3,chr3	-,+	CMTM6,CMTM7	-3,-111302
chr16:2520354-2520919	chr16	+	2520647	2520847	True	NM_001199107,NM_006181,NM_020705,NM_001048212	chr16,chr16,chr16,chr16	+,+,+,-	TBC1D24,NTN3,TBC1D24,CEMP1	4299,652,4299,60612
chr10:50819782-50821020	chr10	+	50819941	50820901	True	NM_000124,NM_020984,NM_001142934,NM_001142933,NM_001142929,NM_020549,NM_003055,NM_020985,NM_020986	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,+,+,+,+,+,+,+,+	ERCC6,CHAT,CHAT,CHAT,CHAT,CHAT,SLC18A3,CHAT,CHAT	-72794,-2851,1181,1181,1181,1181,-1645,252,252
chr7:131239926-131240744	chr7	+	131240257	131240685	True	NM_001018111,NM_005397,NM_013255	chr7,chr7,chr7	-,-,+	PODXL,PODXL,MKLN1	741,741,-227714
chr10:68685265-68687246	chr10	+	68685607	68687277	True	NM_001127384,NM_178011	chr10,chr10	-,+	CTNNA3,LRRTM3	738189,134
chr2:23651339-23651706	chr2	+	23651372	23651749	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	498236,-43125
chr8:6263361-6263654	chr8	+	6263366	6263536	True	NM_001172575,NM_001172574,NM_001118887,NM_024596	chr8,chr8,chr8,chr8	+,+,-,+	MCPH1,MCPH1,ANGPT2,MCPH1	576,576,157298,576
chr1:152538492-152538855	chr1	+	152538685	152538879	True	NM_178434,NM_178435	chr1,chr1	+,-	LCE3C,LCE3E	34258,419
chr22:39795710-39796028	chr22	+	39795798	39795950	True	NM_006116,NM_153497,NM_001033853	chr22,chr22,chr22	+,+,-	TAB1,TAB1,RPL3	-90,-90,-80128
chr10:49458602-49459786	chr10	+	49458735	49459786	True	NM_001018071,NM_002750	chr10,chr10	-,+	FRMPD2,MAPK8	23205,149900
chr3:81813376-81815145	chr3	+	81813400	81814823	True	NM_001167674,NM_000158	chr3,chr3	+,-	CADM2,GBE1	3193309,-2450
chr1:145547792-145548048	chr1	+	145547895	145548022	True	NM_144698,NR_002328	chr1,chr1	+,-	ANKRD35,GNRHR2	1186,-31819
chr2:109335381-109335784	chr2	+	109335549	109335755	True	NM_022336,NM_006267	chr2,chr2	-,+	EDAR,RANBP2	270123,181
chr6:168595525-168595962	chr6	+	168595524	168596009	True	NM_030615,NM_024919	chr6,chr6	+,-	KIF25,FRMD1	-177022,-115685
chr17:7210029-7210666	chr17	+	7210162	7210618	True	NM_001143760,NM_001970,NM_001143762,NM_004489,NM_001143761	chr17,chr17,chr17,chr17,chr17	+,+,+,-,+	EIF5A,EIF5A,EIF5A,GPS2,EIF5A	29,237,1075,8090,669
chr15:91415684-91417148	chr15	+	91415772	91417086	True	NM_198527,NM_002569	chr15,chr15	-,+	HDDC3,FURIN	58747,-3943
chr2:153033602-153034897	chr2	+	153033918	153034767	True	NM_052905,NM_005843	chr2,chr2	+,-	FMNL2,STAM2	156983,-1412
chr12:58160719-58161987	chr12	+	58160830	58161672	True	NM_000785,NM_023033,NM_005371,NM_015433,NM_206914	chr12,chr12,chr12,chr12,chr12	-,-,-,+,+	CYP27B1,METTL1,METTL1,METTL21B,METTL21B	-100,4292,4292,4710,4710
chr16:67204008-67204269	chr16	+	67204070	67204206	True	NM_001538,NM_003946,NM_001040667,NM_001185058,NM_003789,NM_001185057	chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,-,+	HSF4,NOL3,HSF4,NOL3,TRADD,NOL3	-6833,3549,-6833,198,-10258,3558
chr15:41063242-41063499	chr15	+	41063273	41063531	True	NM_018145,NM_001130448,NM_005258	chr15,chr15,chr15	-,+,+	FAM82A2,C15orf62,GCHFR	-15815,-1165,-7039
chr20:30193564-30193827	chr20	+	30193595	30193867	True	NM_181353,NR_036161,NM_001191,NM_002165	chr20,chr20,chr20,chr20	+,+,-,+	ID1,MIR3193,BCL2L1,ID1	-554,1121,116839,-554
chr10:93666993-93667876	chr10	+	93667346	93667545	True	NM_003972,NM_152429	chr10,chr10	+,-	BTAF1,FGFBP3	16190,1764
chr1:24238255-24238978	chr1	+	24238404	24238962	True	NM_001841,NM_017761	chr1,chr1	-,+	CNR2,PNRC2	905,47338
chr11:6704295-6704556	chr11	+	6704372	6704532	True	NM_001014795,NM_022061	chr11,chr11	+,-	ILK,MRPL17	-79216,150
chr11:94518881-94519571	chr11	+	94518886	94519506	True	NM_016403,NM_130847	chr11,chr11	-,+	CWC15,AMOTL1	187320,-17429
chr6:69378205-69378760	chr6	+	69378245	69378768	True	NM_018368,NM_001704	chr6,chr6	-,+	LMBRD1,BAI3	1128332,-32677
chr16:28856093-28856654	chr16	+	28856242	28856670	True	NM_003321,NM_001145795	chr16,chr16	-,+	TUFM,SH2B1	1109,18407
chr12:51608173-51609058	chr12	+	51608328	51608964	True	NR_026893,NM_001136264	chr12,chr12	-,+	POU6F1,DAZAP2	2564,23543
chr9:46278187-46278686	chr4	-	3542399	3542523	False	NM_002337,NM_173660	chr4,chr4	-,+	LRPAP1,DOK7	-8175,-77485
chr9:46278187-46278686	chr9	+	46278252	46278538	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2647522,409027
chr9:46278187-46278686	chr9	-	47161897	47162183	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-3531167,-474382
chr9:46278187-46278686	chr9	-	45104684	45104734	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-114499,-1473954
chr9:46278187-46278686	chr9	+	44766030	44766156	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	224079,-1135300
chr20:19730742-19732282	chr20	+	19731131	19732205	True	NM_016652,NM_018993	chr20,chr20	-,+	CRNKL1,RIN2	304535,138004
chr14:22001019-22002904	chr14	+	22001395	22002942	True	NM_005407,NM_014828	chr14,chr14	-,+	SALL2,TOX4	2445,-56111
chr17:3703138-3703633	chr17	+	3703446	3703648	True	NM_031965,NM_002208	chr17,chr17	+,-	GSG2,ITGAE	-76300,939
chr14:57278019-57278225	chr14	+	57278056	57278202	True	NM_021728,NM_172337,NR_029385	chr14,chr14,chr14	-,-,+	OTX2,OTX2,OTX2OS1	-872,-5711,1698
chr12:121478562-121479556	chr12	+	121478598	121479414	True	NM_198213,NM_003733,NM_000545	chr12,chr12,chr12	-,-,+	OASL,OASL,HNF1A	-1818,-1818,-62100
chrX:38211307-38211588	chrX	+	38211320	38211636	True	NM_001034853,NM_000531	chrX,chrX	-,+	RPGR,OTC	-24532,99
chr1:197134662-197135831	chr1	+	197134767	197135610	True	NM_018136,NM_001193640	chr1,chr1	-,+	ASPM,CRB1	-18943,101723
chr1:10091433-10092036	chr1	+	10091498	10091917	True	NM_001105562,NM_032368,NM_006048	chr1,chr1,chr1	+,-,+	UBE4B,LZIC,UBE4B	1123,-88672,1123
chr19:38860910-38861254	chr19	+	38860939	38861299	True	NM_152657,NM_002812	chr19,chr19	-,+	GGN,PSMD8	17419,3890
chr9:100933895-100935524	chr9	+	100933899	100935550	True	NM_018946,NM_003389	chr9,chr9	+,-	NANS,CORO2A	-114991,-45
chr16:31128613-31128947	chr16	+	31128725	31128995	True	NM_002773,NM_001122957,NM_032188,NM_182958,NM_005881	chr16,chr16,chr16,chr16,chr16	-,+,+,+,+	PRSS8,BCKDK,MYST1,MYST1,BCKDK	18206,-9114,3,3,-9114
chr1:38020925-38021648	chr1	+	38021231	38021523	True	NM_024700,NM_003462	chr1,chr1	-,+	SNIP1,DNALI1	-1328,996
chr17:76777145-76777634	chr17	+	76777273	76777482	True	NM_017456,NM_030968,NM_004762	chr17,chr17,chr17	-,+,-	CYTH1,C1QTNF1,CYTH1	945,242768,945
chr19:11309637-11310129	chr19	+	11309726	11310168	True	NM_015493,NM_018687,NM_001136191	chr19,chr19,chr19	-,+,-	KANK2,LOC55908,KANK2	-4460,40126,-1483
chr14:55224713-55225349	chr14	+	55224775	55225275	True	NR_036194,NM_001161577	chr14,chr14	-,+	MIR4308,SAMD4A	119686,-3320
chr7:53879648-53879986	chr7	+	53879672	53879859	True	NM_182546,NR_004422	chr7,chr7	+,-	VSTM2A,HPVC1	730159,390318
chr1:121272791-121273317	chr5	-	49725351	49725407	True	NM_198449,NM_001178055	chr5,chr5	-,+	EMB,PARP8	11883,236325
chr5:140228695-140229487	chr5	+	140228744	140229474	True	NM_014005,NM_031860,NM_002109,NM_018911,NM_031859,NM_031856,NM_031857,NM_018901	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,-,+,+,+,+,+	PCDHA9,PCDHA10,HARS,PCDHA8,PCDHA10,PCDHA8,PCDHA9,PCDHA10	-1438,6159,-157773,-7888,6159,-7888,-1438,6159
chr5:140228695-140229487	chr5	+	140214632	140214682	False	NM_031849,NM_002109,NM_018909,NM_031848,NM_031856,NM_018910,NM_018911,NM_031852	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,-,+,+,+,+,+,+	PCDHA6,HARS,PCDHA6,PCDHA6,PCDHA8,PCDHA7,PCDHA8,PCDHA7	-7033,-143661,-7033,-7033,6224,-714,6224,-714
chr19:17500538-17500986	chr19	+	17500815	17500989	True	NM_138401,NM_031310	chr19,chr19	+,-	FAM125A,PLVAP	29922,-12678
chr9:39899293-39900683	chr9	+	39899527	39899599	True	NR_026803,NR_003528	chr9,chr9	+,-	FAM74A1,LOC653501	600,-435001
chr9:39899293-39900683	chr9	-	65494986	65495058	False	NR_026802,NR_024496,NR_027461	chr9,chr9,chr9	-,+,-	FAM74A4,LOC442421,FAM74A2	-600,999210,-600
chr9:39899293-39900683	chr9	+	39370243	39370315	False	NR_027861,NM_001040065	chr9,chr9	-,+	ZNF658B,FAM75A2	76927,-14600
chr9:39899293-39900683	chr9	-	41312731	41312803	False	NM_001113541,NM_015667	chr9,chr9	-,+	FAM75A5,FAM75A7	14616,187875
chr9:39899293-39900683	chr9	+	41515235	41515307	False	NM_001113541,NR_027861	chr9,chr9	+,-	FAM75A5,ZNF658B	-14612,76954
chr12:6936938-6937588	chr12	+	6936948	6937636	True	NM_014262,NM_031299,NM_019858,NM_014449	chr12,chr12,chr12,chr12	+,-,+,+	LEPREL2,CDCA3,GPR162,GPR162	-65,22870,-6036,-6036
chr12:123943639-123944396	chr12	+	123943835	123944401	True	NM_180699,NM_022717,NM_145058	chr12,chr12,chr12	+,+,-	SNRNP35,SNRNP35,RILPL2	-15,-1248,-22571
chr21:15053476-15053834	chr21	+	15053497	15053803	True	NR_026755,NM_174981	chr21,chr21	-,+	C21orf15,POTED	166932,-71050
chr19:45924472-45924818	chr19	+	45924592	45924656	True	NM_001166049,NM_202001,NM_012099,NM_001983	chr19,chr19,chr19,chr19	-,-,+,-	ERCC1,ERCC1,CD3EAP,ERCC1	2571,2214,-15176,2571
chr1:248903242-248903950	chr1	+	248903286	248903948	True	NM_001085474,NR_036070	chr1,chr1	-,+	LOC646627,MIR3124	-135,216627
chr4:981245-981507	chr4	+	981317	981513	True	NM_022042,NM_000203,NM_134425,NM_213613	chr4,chr4,chr4,chr4	-,+,-,-	SLC26A1,IDUA,SLC26A1,SLC26A1	5720,-583,5720,5761
chr1:158619967-158621159	chr1	+	158620139	158621200	True	NM_001004478,NM_003126	chr1,chr1	+,-	OR10Z1,SPTA1	-43965,35357
chr7:30632046-30632879	chr7	+	30632225	30632637	True	NR_037669,NM_002047	chr7,chr7	-,+	GGCT,GARS	-87768,1543
chr9:137030987-137031298	chr9	+	137031019	137031221	True	NR_023344,NM_052821	chr9,chr9	-,+	RNU6ATAC,WDR5	-1333,-26156
chr19:5823948-5824322	chr19	+	5824003	5824263	True	NM_004558,NM_000150	chr19,chr19	+,-	NRTN,FUT6	-236,15529
chr5:43187630-43188891	chr5	+	43188188	43188543	True	NM_153361,NR_034127	chr5,chr5	+,-	MGC42105,LOC100132356	3783,-121115
chrX:134973739-134975073	chrX	+	134973738	134974956	True	NM_001017438,NM_018666	chrX,chrX	-,+	CT45A6,SAGE1	-2494,828
chr4:110482043-110482321	chr4	+	110482112	110482338	True	NM_017918,NM_001226	chr4,chr4	+,-	CCDC109B,CASP6	-808,142341
chr19:41768664-41769774	chr19	+	41768979	41769709	True	NM_144732,NM_007040,NM_000660	chr19,chr19,chr19	+,+,-	HNRNPUL1,HNRNPUL1,TGFB1	-639,410,90172
chr14:102417636-102417943	chr14	+	102417706	102417841	True	NM_001376,NM_005348	chr14,chr14	+,-	DYNC1H1,HSP90AA1	13023,135728
chr1:2488982-2489551	chr1	+	2489202	2489536	True	NR_037844,NR_026927,NM_003820	chr1,chr1,chr1	-,-,+	LOC100133445,LOC115110,TNFRSF14	-752,-4918,-1448
chr1:185339229-185340587	chr1	+	185339328	185340512	True	NM_017673,NM_006469	chr1,chr1	+,-	SWT1,IVNS1ABP	-213095,-52867
chr16:71665562-71666317	chr16	+	71665744	71666336	True	NM_000353,NM_001017967,NM_052858	chr16,chr16,chr16	-,+,+	TAT,MARVELD3,MARVELD3	-54746,-5738,-5738
chr15:57209868-57210269	chr15	+	57209872	57210268	True	NM_003205,NM_207038,NM_207037,NR_015419,NM_207036	chr15,chr15,chr15,chr15,chr15	+,+,+,-,+	TCF12,TCF12,TCF12,LOC145783,TCF12	564,564,564,479,564
chr3:30642714-30643178	chr3	+	30642713	30643229	True	NM_207359,NM_003242,NM_001024847	chr3,chr3,chr3	-,+,+	GADL1,TGFBR2,TGFBR2	292984,4764,4764
chr3:128294895-128295132	chr3	+	128294894	128295076	True	NM_007354,NR_026954	chr3,chr3	-,+	C3orf27,LOC90246	27,-68267
chr2:54951153-54951727	chr2	+	54951209	54951767	True	NM_001039753,NM_007008	chr2,chr2	+,-	EML6,RTN4	381,285753
chr12:4484069-4484414	chr12	+	4484068	4484404	True	NM_020638,NM_020375	chr12,chr12	-,+	FGF23,C12orf5	4540,-53760
chr3:186738910-186739382	chr3	+	186739036	186739250	True	NM_003032,NM_052969	chr3,chr3	+,-	ST6GAL1,RPL39L	414,118063
chr11:2465692-2466035	chr11	+	2465732	2466084	True	NM_000218,NM_014555	chr11,chr11	+,-	KCNQ1,TRPM5	136,-21457
chr2:99778929-99780913	chr2	+	99778929	99780741	True	NR_037935,NR_037936,NM_015929,NM_025244,NM_145197,NM_145196,NM_145199,NM_145198,NM_001204830	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,-,+,+,+,+,+	LIPT1,LIPT1,LIPT1,TSGA10,LIPT1,LIPT1,LIPT1,LIPT1,LIPT1	-7443,-7562,-7562,-7742,-7562,-7562,-7562,-7562,-7443
chr5:122848602-122848907	chr5	+	122848639	122848923	True	NM_001044722,NM_001044723,NM_001031812,NM_153223,NM_004384	chr5,chr5,chr5,chr5,chr5	+,+,+,-,+	CSNK1G3,CSNK1G3,CSNK1G3,CEP120,CSNK1G3	-897,-897,-897,-89353,-897
chr16:67882567-67883537	chr16	+	67882717	67883253	True	NM_025082,NM_020457,NM_005796	chr16,chr16,chr16	-,+,+	CENPT,THAP11,NUTF2	-1356,-6555,-1949
chr15:44093127-44093358	chr15	+	44093192	44093322	True	NM_016400,NM_001033517,NM_001199885,NR_037673,NR_037672,NM_001199878,NM_001199876,NR_031695,NM_001199875,NM_001018108	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,-,+,+,+,+,+,-,+,+	C15orf63,SERINC4,C15orf63,SERF2-C15ORF63,SERF2,SERF2,SERF2,MIR1282,SERF2,SERF2	-631,-937,-631,-9076,-9076,-8675,-9076,-7235,-9076,-9210
chr16:70490061-70491316	chr16	+	70490192	70491140	True	NM_145059,NM_006927	chr16,chr16	+,-	FUK,ST3GAL2	-1752,-17201
chr6:131963160-131964552	chr6	+	131963248	131964568	True	NM_004830,NM_005021	chr6,chr6	-,+	MED23,ENPP3	-13885,-4857
chr1:177107766-177108940	chr1	+	177107927	177108979	True	NM_004319,NM_021165	chr1,chr1	-,+	ASTN1,FAM5B	25095,31653
chr2:182559308-182560393	chr2	+	182559311	182560236	True	NM_002500,NM_001130445	chr2,chr2	-,+	NEUROD1,SSFA2	-13919,196235
chr19:3227028-3227506	chr19	+	3227151	3227445	True	NR_033342,NM_198969,NM_021938,NM_001172673	chr19,chr19,chr19,chr19	+,-,+,+	CELF5,AES,CELF5,CELF5	-1719,-164187,-2501,-2500
chr4:121264032-121265412	chr4	+	121264241	121265430	True	NM_002358,NR_037630	chr4,chr4	-,+	MAD2L1,LOC645513	-276228,-888361
chr22:46373738-46374057	chr22	+	46373834	46373942	True	NM_058238,NR_027240	chr22,chr22	-,+	WNT7B,LOC730668	-826,28553
chr14:69262579-69262809	chr14	+	69262598	69262838	True	NM_207442,NM_004926,NM_001193360	chr14,chr14,chr14	-,-,+	C14orf181,ZFP36L1,EXD2	402,-2813,395355
chr19:44257888-44258124	chr19	+	44257907	44258017	True	NM_019108,NM_019612	chr19,chr19	-,+	C19orf61,IRGC	1175,-37744
chr11:71498554-71498760	chr11	+	71498610	71498674	True	NM_018172,NM_152563,NR_029192,NM_001099653	chr11,chr11,chr11,chr11	+,+,-,+	FAM86C,FAM86C,LOC100133315,FAM86C	-104,-104,140869,-104
chr15:91565532-91565750	chr15	+	91565618	91565762	True	NM_018668,NM_033544	chr15,chr15	-,+	VPS33B,RCCD1	121,-67563
chr5:60625599-60626681	chr5	+	60625644	60626582	True	NM_001048249,NM_020928	chr5,chr5	-,+	C5orf43,ZSWIM6	-167342,1517
chr11:60739435-60741382	chr11	+	60739469	60741286	True	NR_027391,NM_006725	chr11,chr11	-,+	SLC15A3,CD6	-20212,-405
chr10:65285269-65287151	chr10	+	65285479	65287160	True	NM_032776,NM_001001330	chr10,chr10	-,+	JMJD1C,REEP3	-59757,-4419
chr11:66360801-66361684	chr11	+	66360940	66361552	True	NM_005125,NM_018219	chr11,chr11	+,-	CCS,CCDC87	-301,-386
chr1:26324446-26326412	chr1	+	26324565	26326137	True	NM_000437,NM_004455	chr1,chr1	-,+	PAFAH2,EXTL1	-11,22133
chr19:8370768-8371277	chr19	+	8370774	8371272	True	NM_001031,NM_016579,NM_001165895	chr19,chr19,chr19	+,-,-	RPS28,CD320,CD320	15111,2018,2018
chr9:130742308-130742514	chr9	+	130742336	130742552	True	NM_001035254,NM_001006641	chr9,chr9	-,+	FAM102A,SLC25A25	310,87926
chr18:19182318-19183093	chr18	+	19182359	19183100	True	NM_006938,NM_052911	chr18,chr18	+,-	SNRPD1,ESCO1	9159,-1666
chr16:279953-280341	chr16	+	279985	280075	True	NM_201412,NM_018032,NM_032039	chr16,chr16,chr16	-,-,+	LUC7L,LUC7L,ITFG3	-536,-536,4725
chr22:45406754-45407139	chr22	+	45406779	45407142	True	NM_007172,NM_138415,NM_001135862	chr22,chr22,chr22	+,-,-	NUP50,PHF21B,PHF21B	152583,-1198,-970
chr2:177137757-177139388	chr2	+	177137834	177139372	True	NR_033979,NM_006554,NR_027850	chr2,chr2,chr2	-,+,+	LOC401022,MTX2,MTX2	-84148,-3763,-3763
chr2:34169725-34170187	chr2	+	34169724	34170035	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-430833,-216440
chr17:71307764-71308039	chr17	+	71307786	71308040	True	NM_012121,NM_017941	chr17,chr17	-,+	CDC42EP4,C17orf80	153,-79061
chr20:34335187-34335649	chr20	+	34335593	34335657	True	NM_184234,NM_004902,NM_016436	chr20,chr20,chr20	-,-,+	RBM39,RBM39,PHF20	-5400,-5400,24265
chr12:50229135-50230749	chr12	+	50229276	50230746	True	NM_181708,NM_001037806,NR_027500,NR_027501,NR_027499	chr12,chr12,chr12,chr12,chr12	-,-,+,+,+	BCDIN3D,NCKAP5L,LOC100286844,LOC100286844,LOC100286844	6216,-7068,-7001,-7001,-7001
chr12:118498304-118498546	chr12	+	118498303	118498463	True	NM_018639,NM_181578	chr12,chr12	-,+	WSB2,RFC5	538,-43846
chr5:177398415-177399263	chr12	+	118839590	118839809	True	NM_022491,NM_016281	chr12,chr12	+,-	SUDS3,TAOK3	-25452,-28840
chr2:71165661-71165862	chr2	+	71165665	71165767	True	NM_144582,NM_001692	chr2,chr2	-,+	TEX261,ATP6V1B1	56284,-2718
chr2:86682934-86683898	chr2	+	86683175	86683735	True	NM_001146688,NM_001005753	chr2,chr2	+,-	KDM3A,VPS24	-14648,106945
chr10:90343202-90344570	chr10	+	90343249	90344554	True	NM_018363,NM_001031709,NM_001010939	chr10,chr10,chr10	-,-,+	RNLS,RNLS,LIPJ	-167,-167,1964
chr19:49954728-49954929	chr19	+	49954751	49954977	True	NM_020309,NM_153329,NM_001145396,NM_017916	chr19,chr19,chr19,chr19	-,+,+,-	SLC17A7,ALDH16A1,ALDH16A1,PIH1D1	-9943,1495,1495,188
chr13:110439887-110440483	chr13	+	110440181	110440526	True	NM_003749,NM_001846	chr13,chr13	-,+	IRS2,COL4A2	-1267,519104
chr6:135378685-135379047	chr6	+	135378905	135379083	True	NM_001145158,NM_005375,NM_001145207,NM_006620	chr6,chr6,chr6,chr6	-,+,-,-	HBS1L,MYB,HBS1L,HBS1L	-2869,123369,-2869,-2869
chr15:65116900-65117728	chr15	+	65117219	65117591	True	NM_001195059,NM_025049	chr15,chr15	+,-	PLEKHO2,PIF1	16490,297
chr15:74748892-74749604	chr15	+	74748915	74749527	True	NM_006465,NM_032907,NM_201265	chr15,chr15,chr15	+,-,-	ARID3B,UBL7,UBL7	84020,4044,4063
chr13:77899935-77900676	chr13	+	77899955	77900697	True	NM_015057,NM_001160706	chr13,chr13	-,+	MYCBP2,SCEL	530,209111
chr20:61925156-61925381	chr20	+	61925263	61925429	True	NM_152864,NR_036220,NM_020882	chr20,chr20,chr20	-,+,+	NKAIN4,MIR4326,COL20A1	-39371,-7154,-776
chr1:31458841-31460202	chr1	+	31459151	31460035	True	NR_002762,NR_003066	chr1,chr1	+,-	PRO0611,SNORD85	876,-18067
chr6:111926453-111926744	chr6	+	111926473	111926711	True	NM_001164281,NR_028338,NM_147686,NR_034109	chr6,chr6,chr6,chr6	-,-,-,+	TRAF3IP2,TRAF3IP2,TRAF3IP2,LOC643749	813,813,813,-121849
chr7:21466429-21466667	chr7	+	21466440	21466682	True	NM_003112,NM_001127370	chr7,chr7	+,-	SP4,CDCA7L	1006,518910
chr17:8339657-8339888	chr17	+	8339834	8339910	True	NM_030808,NM_001146684,NM_001025579	chr17,chr17,chr17	+,-,+	NDEL1,RNF222,NDEL1	-706,-38690,-706
chr18:68099195-68100842	chr18	+	68099368	68100506	True	NM_173630,NM_004232	chr18,chr18	-,+	RTTN,SOCS6	-226406,-143292
chr19:236962-238327	chr19	+	237994	238052	True	NM_001005240,NR_028324	chr19,chr19	+,-	OR4F17,FLJ45445	-127366,-35785
chr1:92415195-92415725	chr1	+	92415237	92415727	True	NM_207189,NM_001195684,NM_001726	chr1,chr1,chr1	+,-,+	BRDT,TGFBR3,BRDT	-360,-43678,1981
chr16:29833187-29834325	chr16	+	29833191	29834050	True	NM_006319,NM_024516,NM_017458,NM_145239,NM_005115	chr16,chr16,chr16,chr16,chr16	-,+,+,+,+	CDIPT,C16orf53,MVP,PRRT2,MVP	40578,-5714,-1527,-9833,-1527
chr20:47836203-47836885	chr20	+	47836239	47836837	True	NM_017454,NM_017895	chr20,chr20	-,+	STAU1,DDX27	-31335,-458
chr15:75626817-75627295	chr15	+	75626882	75627184	True	NR_030360,NM_017828	chr15,chr15	-,+	MIR631,COMMD4	18892,1189
chr3:52313397-52314183	chr3	+	52313514	52314223	True	NM_001144951,NM_025222,NR_026701,NR_026700,NR_026702,NM_145262,NR_026699	chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,-,+,+,+,+,+	GLYCTK,WDR82,GLYCTK,GLYCTK,GLYCTK,GLYCTK,GLYCTK	7612,-855,7612,7612,7612,7612,7612
chr5:191278-191490	chr5	+	191287	191539	True	NM_145265,NM_001080478	chr5,chr5	-,+	CCDC127,LRRC14B	26808,86
chr3:94705939-94706980	chr3	+	94706070	94707002	True	NR_015400,NM_001195643	chr3,chr3	+,-	LOC255025,DHFRL1	-49014,-924003
chr12:63332425-63333492	chr12	+	63332710	63333255	True	NR_029661,NM_020700	chr12,chr12	+,-	MIRLET7I,PPM1H	-335298,-4045
chr21:47703731-47704033	chr21	+	47703787	47703965	True	NM_003906,NM_001006114,NM_058181	chr21,chr21,chr21	-,+,+	MCM3AP,YBEY,YBEY	1321,2301,2301
chr18:812626-812889	chr18	+	812664	812889	True	NM_001099733,NM_005433	chr18,chr18	+,-	ADCYAP1,YES1	92054,-337
chr3:35680030-35680731	chr3	+	35680154	35680680	True	NM_033403,NM_016300	chr3,chr3	-,+	DCLK3,ARPP21	1100722,3168
chr12:93570954-93571604	chr12	+	93570966	93571626	True	NM_019094,NM_003566	chr12,chr12	+,-	NUDT4,EEA1	200074,-247859
chr3:137886507-137887075	chr3	+	137886815	137886897	True	NM_014154,NM_016216	chr3,chr3	+,-	ARMC8,DBR1	19250,6952
chr6:42125280-42126162	chr6	+	42125459	42125953	True	NM_001164446,NM_000409	chr6,chr6	-,+	C6orf132,GUCA1A	-14744,-2367
chr16:67264294-67264640	chr16	+	67264293	67264549	True	NM_014187,NM_012163,NM_001004055	chr16,chr16,chr16	+,-,-	TMEM208,LRRC29,LRRC29	-3328,-3572,-3392
chr1:153747430-153747700	chr1	+	153747470	153747636	True	NM_024330,NM_004515	chr1,chr1	+,-	SLC27A3,ILF2	131,-103991
chr6:159237837-159238466	chr6	+	159238124	159238446	True	NM_001111077,NM_003379,NM_001195032	chr6,chr6,chr6	-,-,+	EZR,EZR,C6orf99	2060,944,71172
chr1:224616531-224616818	chr1	+	224616620	224616697	True	NM_001115113,NM_014184,NM_025160	chr1,chr1,chr1	-,+,-	WDR26,CNIH4,WDR26	5355,-72085,5355
chr3:139391076-139391862	chr3	+	139391184	139391695	True	NM_001200047,NM_178177,NM_022131	chr3,chr3,chr3	-,-,+	NMNAT3,NMNAT3,CLSTN2	5247,5247,262331
chr19:45030197-45031772	chr19	+	45030988	45031722	True	NM_001102598,NM_001102599,NM_001205280,NM_001102600,NM_001102597	chr19,chr19,chr19,chr19,chr19	-,-,+,-,-	CEACAM20,CEACAM20,LOC147710,CEACAM20,CEACAM20	1876,1876,85217,1876,1876
chr10:27259044-27260884	chr10	+	27259269	27260822	True	NR_026795,NM_001172303	chr10,chr10	-,+	NCRNA00202,MASTL	-28339,182930
chr9:129623616-129624426	chr9	+	129623789	129624463	True	NM_001099270,NM_012098	chr9,chr9	+,-	ZBTB34,ANGPTL2	-896,260631
chr7:65865765-65866482	chr7	+	65866078	65866508	True	NR_026873,NM_003596	chr7,chr7	-,+	NCRNA00174,TPST1	-683,-195870
chr7:65865765-65866482	chr7	+	75723157	75723207	False	NM_005918,NM_016086	chr7,chr7	+,-	MDH2,STYXL1	-45815,-45836
chr19:46853530-46853942	chr19	+	46853544	46853930	True	NM_006247,NM_001204284,NM_032040	chr19,chr19,chr19	+,+,-	PPP5C,PPP5C,CCDC8	-3344,-3344,63039
chr12:123204206-123205378	chr12	+	123204853	123205085	True	NM_006018,NM_003677	chr12,chr12	-,+	GPR109B,DENR	-3414,32285
chr21:46346916-46347383	chr21	+	46347043	46347293	True	NM_058190,NM_000211,NM_001127491	chr21,chr21,chr21	+,-,-	C21orf70,ITGB2,ITGB2	12661,-6078,1510
chr1:6579503-6579995	chr1	+	6579506	6579901	True	NM_198681,NM_138697	chr1,chr1	-,+	PLEKHG5,TAS1R1	219,35436
chr6:167705074-167705748	chr6	+	167705217	167705647	True	NM_004610,NM_018974,NM_001143947	chr6,chr6,chr6	-,+,+	TCP10,UNC93A,UNC93A	92401,-465,-465
chr1:168101283-168101545	chr1	+	168101493	168101557	True	NM_153832,NM_001031800	chr1,chr1	-,+	GPR161,TIPRL	4117,46613
chr10:121411777-121412650	chr10	+	121411906	121412685	True	NM_004281,NM_003252	chr10,chr10	+,-	BAG3,TIAL1	-1075,-55365
chr15:66857634-66858102	chr15	+	66857656	66858090	True	NM_207338,NR_003105	chr15,chr15	-,+	LCTL,ZWILCH	-55,-60276
chr20:35885299-35886161	chr20	+	35885395	35886093	True	NM_021081,NM_001003897,NM_001184731	chr20,chr20,chr20	-,+,-	GHRH,MANBAL,GHRH	-96,31957,-96
chr19:39758941-39759411	chr19	+	39758965	39759249	True	NM_172139,NM_172138	chr19,chr19	-,+	IL28B,IL28A	-23354,45
chr19:39758941-39759411	chr19	-	39735676	39735960	False	NM_172139,NM_172138	chr19,chr19	-,+	IL28B,IL28A	-65,23196
chr1:6685095-6685298	chr1	+	6685131	6685325	True	NM_014851,NM_001195752,NM_001195753,NM_138350	chr1,chr1,chr1,chr1	-,+,+,+	KLHL21,THAP3,THAP3,THAP3	-22202,24,-257,24
chr12:64617110-64617955	chr12	+	64617111	64617501	True	NM_007235,NM_152440	chr12,chr12	+,-	XPOT,C12orf66	180651,-1035
chr15:75135026-75135232	chr15	+	75135101	75135223	True	NM_001030005,NM_001099436	chr15,chr15	+,-	CPLX3,ULK3	-16201,379
chr6:64353605-64354876	chr6	+	64353749	64354733	True	NM_015153,NM_016571	chr6,chr6	+,-	PHF3,LGSN	1697,-323867
chr15:98503013-98503378	chr15	+	98503016	98503378	True	NM_183376,NR_024173	chr15,chr15	+,-	ARRDC4,LOC91948	554,-85357
chr2:234474780-234475116	chr2	+	234474831	234475099	True	NM_019076,NM_018218	chr2,chr2	+,-	UGT1A8,USP40	51191,-595
chr6:42883582-42883811	chr6	+	42883594	42883858	True	NM_138296,NM_001008739	chr6,chr6	+,-	PTCRA,C6orf226	-14,-25040
chr12:49690320-49690661	chr12	+	49690429	49690653	True	NM_001008223,NM_006262	chr12,chr12	-,+	C1QL4,PRPH	40368,-1571
chr19:36522354-36523043	chr19	+	36522365	36522936	True	NM_001083961,NM_001199570,NM_015526	chr19,chr19,chr19	+,-,-	WDR62,CLIP3,CLIP3	22846,700,924
chr9:129378682-129378968	chr9	+	129378808	129379004	True	NM_001174146,NM_001174147,NM_002316,NM_012098	chr9,chr9,chr9,chr9	+,+,+,-	LMX1B,LMX1B,LMX1B,ANGPTL2	-2137,-2137,-2137,506090
chr11:125754471-125754849	chr11	+	125754626	125754854	True	NM_145014,NM_001134793,NM_031307	chr11,chr11,chr11	+,+,-	HYLS1,HYLS1,PUS3	-1181,2100,18312
chr11:6414477-6415209	chr11	+	6414503	6415208	True	NM_000543,NM_001164,NM_001007593	chr11,chr11,chr11	+,-,+	SMPD1,APBB1,SMPD1	-2911,25143,-2911
chr5:114596184-114597637	chr5	+	114596441	114597626	True	NM_005023,NM_001284	chr5,chr5	-,+	PGGT1B,AP3S1	994,579992
chr22:38862448-38863603	chr22	+	38862477	38863632	True	NM_016657,NM_006855,NM_152868	chr22,chr22,chr22	+,+,-	KDELR3,KDELR3,KCNJ4	450,450,-11274
chr6:151185724-151186756	chr6	+	151186165	151186757	True	NM_020861,NM_015440	chr6,chr6	-,+	ZBTB2,MTHFD1L	525970,55
chr6:168595182-168595525	chr6	+	168595264	168595574	True	NM_030615,NM_024919	chr6,chr6	+,-	KIF25,FRMD1	-176762,-115425
chrY:2708922-2709563	chrY	+	2709001	2709581	True	NM_003140,NM_001008	chrY,chrY	-,+	SRY,RPS4Y1	-53209,41
chr10:18429625-18429825	chr10	+	18429632	18429860	True	NM_001167945,NM_201596,NM_201597,NM_201593,NM_201572,NM_201571,NM_182543	chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,+,-	CACNB2,CACNB2,CACNB2,CACNB2,CACNB2,CACNB2,NSUN6	-21,-77,-77,-77,-21,-21,510740
chr12:52797550-52798338	chr12	+	52797565	52798357	True	NM_002284,NM_033033	chr12,chr12	+,-	KRT86,KRT82	-101967,1869
chr19:19928727-19929651	chr19	+	19929103	19929635	True	NM_001099269,NM_021047,NM_001145404	chr19,chr19,chr19	-,+,-	ZNF506,ZNF253,ZNF506	2975,47078,2975
chrX:152226071-152226560	chrX	+	152226136	152226368	True	NM_032882,NM_013364	chrX,chrX	-,+	PNMA6A,PNMA3	19640,-1421
chr11:17569521-17570557	chr11	+	17569874	17570602	True	NM_153676,NM_002478,NM_005709	chr11,chr11,chr11	-,+,-	USH1C,MYOD1,USH1C	-3911,170507,-3911
chr19:51860418-51861284	chr19	+	51860658	51861310	True	NM_001985,NM_001014763,NM_001101372	chr19,chr19,chr19	-,-,+	ETFB,ETFB,IGLON5	8412,-2562,-45607
chr1:22467514-22468734	chr1	+	22467663	22468655	True	NM_030761,NM_001791	chr1,chr1	-,+	WNT4,CDC42	914,-88594
chr17:34198471-34198904	chr17	+	34198474	34198738	True	NM_152781,NM_003487,NM_002985	chr17,chr17,chr17	-,+,-	C17orf66,TAF15,CCL5	-2579,-62045,8689
chr9:39288764-39289631	chr9	+	39289025	39289406	True	NM_033655,NM_001085452	chr9,chr9	-,+	CNTNAP3,FAM75A1	-725,66292
chr9:39288764-39289631	chr9	-	65575674	65575751	False	NR_024496,NM_015667	chr9,chr9	+,-	LOC442421,FAM75A7	918517,-66064
chr9:39288764-39289631	chr9	+	39818574	39818651	False	NR_003528,NM_001085452	chr9,chr9	-,+	LOC653501,FAM75A1	-354048,66323
chr9:39288764-39289631	chr9	+	41434596	41434673	False	NM_015667	chr9	+	FAM75A7	66005
chr9:115088153-115089456	chr9	+	115088371	115088899	True	NM_005156,NM_001163788,NM_001195822,NM_001163790	chr9,chr9,chr9,chr9	-,-,+,-	ROD1,ROD1,HSDL2,ROD1	7109,7109,53289,7109
chr4:74909212-74910860	chr4	+	74909245	74910796	True	NM_001144978,NM_002090	chr4,chr4	+,-	MTHFD2L,CXCL3	113032,-4755
chr14:23504188-23504731	chr14	+	23504277	23504748	True	NM_001144932,NM_001099780,NM_002797,NM_001130725	chr14,chr14,chr14,chr14	-,+,-,-	PSMB5,PSMB11,PSMB5,PSMB5	-29,6627,-29,2
chr10:70847428-70848920	chr10	+	70847457	70848907	True	NM_001057,NR_036430,NM_002727	chr10,chr10,chr10	-,+,+	TACR2,SRGN,SRGN	327824,-121,-121
chr11:6412061-6412984	chr11	+	6412104	6412850	True	NM_000543,NM_001164,NM_001007593	chr11,chr11,chr11	+,-,+	SMPD1,APBB1,SMPD1	-511,27500,-511
chr11:19155361-19156452	chr11	+	19155366	19155771	True	NM_001127656,NM_019028	chr11,chr11	-,+	CSRP3,ZDHHC13	67815,-16727
chr14:20106449-20106917	chr22	+	16374116	16374520	False	NM_001005239,NR_001591	chr22,chr22	-,+	OR11H1,psiTPTE22	75334,708280
chr14:20106449-20106917	chr2	+	130691457	130691577	False	NR_026740,NM_032144	chr2,chr2	-,+	LOC389033,RAB6C	363,45657
chr14:20106449-20106917	chr14	+	20106497	20106899	True	NM_001197287,NM_172194	chr14,chr14	-,+	OR11H2,OR4Q3	75642,108687
chr12:114840050-114840721	chr12	+	114840168	114840731	True	NM_181486,NM_080718,NM_080717,NM_138432,NM_000192	chr12,chr12,chr12,chr12,chr12	-,-,-,+,-	TBX5,TBX5,TBX5,SDSL,TBX5	3208,1022,5566,-980010,5566
chr1:69347386-69347948	chr1	+	69347504	69347963	True	NM_017779,NM_020794	chr1,chr1	-,+	DEPDC1,LRRC7	-384705,877894
chr2:202045450-202045948	chr2	+	202045456	202045859	True	NM_001230,NM_032977,NM_032974,NM_173822	chr2,chr2,chr2,chr2	+,+,+,-	CASP10,CASP10,CASP10,FAM126B	1761,1761,1761,-109064
chr7:27496469-27496959	chr7	+	27496493	27497007	True	NM_001989,NM_152740	chr7,chr7	+,-	EVX1,HIBADH	-214380,205663
chr7:27496469-27496959	chr7	-	73610580	73610926	False	NR_030321,NM_002914	chr7,chr7	+,-	MIR590,RFC2	-5103,57862
chr6:31777185-31778256	chr6_qbl_hap6	+	3071060	3071749	False	NM_005345,NM_005527,NM_021177	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	+,-,-	HSPA1A,HSPA1L,LSM2	5188,4794,-2680
chr6:31777185-31778256	chr6_dbb_hap3	+	3062999	3063879	False	NM_005345,NM_005527,NM_021177	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	+,-,-	HSPA1A,HSPA1L,LSM2	4998,4593,-2673
chr6:31777185-31778256	chr6	+	31777412	31778292	True	NM_005345,NM_005527,NM_021177	chr6,chr6,chr6	+,-,-	HSPA1A,HSPA1L,LSM2	4998,4593,-2669
chr6:31777185-31778256	chr6_apd_hap1	+	3092173	3092862	False	NM_005345,NM_005527,NM_021177	chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1	+,-,-	HSPA1A,HSPA1L,LSM2	5189,4795,-2679
chr6:31777185-31778256	chr6_cox_hap2	+	3286993	3287682	False	NM_005345,NM_005527,NM_021177	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,-,-	HSPA1A,HSPA1L,LSM2	5188,4794,-2679
chr12:112729597-112730526	chr12	+	112729698	112730452	True	NM_002834,NM_001109662	chr12,chr12	+,-	PTPN11,C12orf51	126083,89494
chr1:187061972-187063380	chr1	+	187062057	187063144	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-412498,-264083
chr1:25259194-25259467	chr1	+	25259194	25259422	True	NM_013943,NM_004350	chr1,chr1	+,-	CLIC4,RUNX3	-187485,-2424
chr11:75140518-75140801	chr11	+	75140526	75140690	True	NR_000025,NM_001039548	chr11,chr11	+,-	SNORD15B,KLHL35	-25112,1034
chr12:92819993-92821409	chr12	+	92820196	92821412	True	NM_001025233,NM_001025232,NR_027932,NR_027933	chr12,chr12,chr12,chr12	+,-,+,+	CLLU1,CLLU1OS,CLLU1,CLLU1	-2512,562,-4940,-4940
chr17:40088715-40089759	chr17	+	40088721	40089487	True	NM_198830,NM_031421	chr17,chr17	-,+	ACLY,TTC25	-13449,-1884
chr2:99908669-99908909	chr2	+	99908772	99908954	True	NM_174898,NM_015904	chr2,chr2	-,+	LYG1,EIF5B	8735,44879
chr11:119186012-119186303	chr11	+	119186050	119186344	True	NM_032015,NM_006500	chr11,chr11	+,-	RNF26,MCAM	18892,1546
chr18:44498678-44499340	chr18	+	44498686	44498920	True	NM_173206,NM_004671,NM_031303	chr18,chr18,chr18	-,-,+	PIAS2,PIAS2,KATNAL2	-1220,-1220,27866
chr12:54404331-54404874	chr12	+	54404349	54404764	True	NM_014620,NR_003716,NM_153693,NM_022658,NR_003084	chr12,chr12,chr12,chr12,chr12	+,-,+,+,+	HOXC4,HOTAIR,HOXC6,HOXC8,HOXC5	5877,-41834,5877,-1510,5877
chr22:31792973-31793237	chr22	+	31792991	31793073	True	NM_032051,NM_004147	chr22,chr22	-,+	PATZ1,DRG1	-50742,2465
chr7:64999831-65000350	chr7	+	64999963	65000198	True	NM_000181,NR_027392	chr7,chr7	-,+	GUSB,INTS4L2	447160,112578
chr7:64999831-65000350	chr7	-	64621135	64621326	False	NR_027393,NM_001007253	chr7,chr7	+,-	INTS4L1,ERV3	-19585,-154011
chr7:64999831-65000350	chr7	-	65132290	65132525	False	NM_000181,NR_027392	chr7,chr7	-,+	GUSB,INTS4L2	314834,-19571
chr3:47208528-47208878	chr3	+	47208688	47208868	True	NR_033373,NM_014159	chr3,chr3	+,-	FLJ39534,SETD2	-2880,-3221
chr11:49583247-49584449	chr11	+	49583415	49584486	True	NR_027044,NM_004476	chr11,chr11	+,-	LOC440040,FOLH1	-3386,-353193
chr11:129820254-129820755	chr11	+	129820253	129820788	True	NR_024233,NM_199439,NM_199438	chr11,chr11,chr11	+,-,-	NCRNA00167,PRDM10,PRDM10	51730,-2736,-2736
chr2:3381820-3382224	chr2	+	3381839	3382075	True	NM_016030,NM_003310	chr2,chr2	+,-	TTC15,TSSC1	1370,-186
chr8:143697466-143697792	chr8	+	143697554	143697802	True	NM_015193,NR_033343	chr8,chr8	-,+	ARC,PSCA	-1721,53923
chr12:42881595-42883181	chr12	+	42881863	42882401	True	NM_016488,NM_001144881,NM_001144882,NM_001144883	chr12,chr12,chr12,chr12	+,-,-,-	PPHLN1,PRICKLE1,PRICKLE1,PRICKLE1	-161978,-4447,-4066,-4066
chr4:124738426-124740298	chr4	+	124738536	124739893	True	NM_198041,NM_020337,NR_027106	chr4,chr4,chr4	-,-,+	NUDT6,ANKRD50,LOC285419	-894413,894044,-43170
chr1:231299704-231299935	chr1	+	231299837	231299955	True	NM_152379,NM_001004342	chr1,chr1	-,+	C1orf131,TRIM67	77019,-1214
chr4:111402962-111404019	chr4	+	111402980	111403699	True	NM_000325,NM_001977	chr4,chr4	-,+	PITX2,ENPEP	140614,-5802
chr1:43367182-43368098	chr1	+	43367245	43367970	True	NM_015911,NM_006516	chr1,chr1	+,-	ZNF691,SLC2A1	-55016,56927
chr6:5005612-5007262	chr6	+	5005613	5007048	True	NM_001145115,NM_006638	chr6,chr6	+,-	PPP1R3G,RPP40	78671,-1342
chr9:33524310-33524660	chr9	+	33524461	33524619	True	NR_003667,NR_003573	chr9,chr9	-,+	SUGT1P1,ANXA2P2	-13297,99603
chr1:156255502-156256132	chr1	+	156255667	156256177	True	NR_026678,NM_015327,NM_032323,NM_144580	chr1,chr1,chr1,chr1	+,-,+,-	TMEM79,SMG5,TMEM79,C1orf85	-3014,-3047,-1648,9322
chr1:228871000-228871205	chr1	+	228871190	228871254	True	NM_033445,NM_021205	chr1,chr1	-,+	HIST3H2A,RHOU	-225630,-417
chr2:172016425-172016643	chr2	+	172016424	172016638	True	NM_012290,NM_015530	chr2,chr2	-,+	TLK1,GORASP2	822,-231439
chr8:21989834-21990051	chr8	+	21989891	21990033	True	NM_005144,NM_001172357,NM_018411,NM_025232	chr8,chr8,chr8,chr8	-,+,-,-	HR,SFTPC,HR,REEP4	-1326,29150,-1326,9465
chr22:23879867-23880767	chr22	+	23880100	23880800	True	NM_153615,NM_020070	chr22,chr22	+,-	RGL4,IGLL1	152247,41745
chr1:46249565-46249797	chr1	+	46249581	46249687	True	NM_005897,NM_015112	chr1,chr1	-,+	IPP,MAST2	-33096,19597
chr12:110269260-110269514	chr12	+	110269270	110269544	True	NM_021625,NM_001143852	chr12,chr12	-,+	TRPV4,TCHP	1718,68534
chr11:57334812-57335163	chr11	+	57335035	57335105	True	NM_004223,NM_001105565,NM_198183	chr11,chr11,chr11	-,+,-	UBE2L6,SMTNL1,UBE2L6	125,-24972,398
chrX:118893764-118894007	chrX	+	118893807	118894033	True	NM_001105576,NR_002584	chrX,chrX	+,-	ANKRD58,SNORA69	-1282,27464
chr16:30543323-30543921	chr16	+	30543507	30543851	True	NM_023931,NM_024671,NM_002209	chr16,chr16,chr16	-,-,+	ZNF747,ZNF768,ITGAL	2393,-5597,-59576
chr22:50764057-50764896	chr22	+	50764101	50764845	True	NM_001001794,NM_014678	chr22,chr22	-,+	FAM116B,PPP6R2	694,16914
chr1:155716037-155716691	chr1	+	155716199	155716659	True	NM_139118,NR_024117	chr1,chr1	-,+	YY1AP1,MSTO2P	-57376,-641
chr1:155716037-155716691	chr1	+	155580619	155581079	False	NM_018116,NM_018489	chr1,chr1	+,-	MSTO1,ASH1L	-663,-48295
chr6:112662874-112663618	chr6	+	112663013	112663577	True	NM_001105209,NM_001013734	chr6,chr6	-,+	LAMA4,RFPL4B	-87185,4954
chrX:107331287-107332783	chrX	+	107331368	107332549	True	NM_052936,NM_178270,NM_002814,NM_170750	chrX,chrX,chrX,chrX	+,+,-,-	ATG4A,ATG4A,PSMD10,PSMD10	2349,2349,2376,2376
chr15:33009282-33009532	chr15	+	33009282	33009506	True	NM_013372,NM_001191323,NM_001191322,NR_036650	chr15,chr15,chr15,chr15	+,+,+,-	GREM1,GREM1,GREM1,LOC100288615	698,698,698,-183340
chr17:43661637-43662040	chr17_ctg5_hap1	+	492919	492969	False	NM_001193465,NM_014834	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	KIAA1267,LRRC37A	70528,-34315
chr17:43661637-43662040	chr17_ctg5_hap1	-	1235608	1235658	False	NR_026901,NR_037772	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LOC644172,CRHR1	-47220,-65155
chr17:43661637-43662040	chr17	+	43661712	43662052	True	NR_026901,NR_037772	chr17,chr17	-,+	LOC644172,CRHR1	17746,35657
chr22:38072099-38072598	chr22	+	38072121	38072504	True	NM_002305,NM_024313,NM_006498	chr22,chr22,chr22	+,+,-	LGALS1,NOL12,LGALS2	-559,9839,-96097
chr17:7530471-7530861	chr17	+	7530477	7530761	True	NM_001040,NM_133491,NM_001146279,NM_001146280,NM_001146281,NR_027462	chr17,chr17,chr17,chr17,chr17,chr17	+,-,+,+,+,+	SHBG,SAT2,SHBG,SHBG,SHBG,SHBG	2691,483,2691,2691,2691,525
chr19:48949690-48950658	chr19	+	48949749	48950145	True	NM_013348,NM_006801,NM_031485	chr19,chr19,chr19	+,-,+	KCNJ14,KDELR1,GRWD1	8620,-54939,-770
chr17:1930059-1931632	chr17	+	1930563	1931645	True	NM_178568,NM_001383	chr17,chr17	-,+	RTN4RL1,DPH1	-2385,1785
chr8:124194301-124194757	chr8	+	124194326	124194756	True	NM_032899,NR_024479,NM_207006	chr8,chr8,chr8	+,-,+	FAM83A,LOC100131726,FAM83A	-5,20277,-5
chrX:119385219-119385746	chrX	+	119385335	119385763	True	NM_006777,NR_027131,NM_001184742	chrX,chrX,chrX	+,-,+	ZBTB33,NKAPP1,ZBTB33	-779,-6213,-776
chr17:72773491-72773773	chr17	+	72773494	72773782	True	NM_015654,NM_017728	chr17,chr17	-,+	NAT9,TMEM104	-1024,-923
chr9:95735690-95737157	chr9	+	95735889	95737039	True	NM_031486,NM_033086	chr9,chr9	-,+	ZNF484,FGD3	-95599,-8
chr2:132233982-132234362	chr2	+	132234061	132234213	True	NM_001085365,NM_080386	chr2,chr2	-,+	MZT2A,TUBA3D	15901,-446
chr2:132233982-132234362	chr2	-	130955491	130955541	False	NM_025029,NM_207312	chr2,chr2	+,-	MZT2B,TUBA3E	-16041,543
chr11:61200803-61202361	chr11	+	61200824	61202167	True	NM_001136040,NM_001142565,NM_017841,NM_024811	chr11,chr11,chr11,chr11	-,-,+,-	CPSF7,CPSF7,SDHAF2,CPSF7	-3360,-3360,-3288,-3441
chr10:97512763-97513987	chr10	+	97513087	97513442	True	NM_001164178,NM_001164179,NM_001776,NM_001164183,NM_001164182,NM_001164181,NM_001143973	chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,+,-	ENTPD1,ENTPD1,ENTPD1,ENTPD1,ENTPD1,ENTPD1,TCTN3	1966,2230,2230,2230,2230,1966,-59187
chr16:851763-852645	chr16	+	851840	852526	True	NM_001013638,NM_016541	chr16,chr16	+,-	PRR25,GNG13	2916,-1107
chr17:79790008-79790634	chr17	+	79790010	79790458	True	NM_207368,NM_000160,NM_001093767,NM_001007533	chr17,chr17,chr17,chr17	-,+,-,-	FAM195B,GCGR,FAM195B,DYSFIP1	759,-28058,759,2518
chr11:47430885-47431319	chr11	+	47430885	47431197	True	NM_002804,NM_001128225,NM_152264	chr11,chr11,chr11	-,+,+	PSMC3,SLC39A13,SLC39A13	16877,-890,-890
chr10:135379325-135379616	chr10	+	135379349	135379653	True	NM_130784,NR_033789,NM_001143763,NM_001143764,NM_000773	chr10,chr10,chr10,chr10,chr10	-,-,-,-,+	SYCE1,SPRNP1,SYCE1,SYCE1,CYP2E1	3273,3859,-211,-211,-38533
chr19:41862398-41863488	chr19	+	41862763	41863537	True	NM_030578,NM_001098825,NM_000660	chr19,chr19,chr19	-,+,-	B9D2,TMEM91,TGFB1	6591,6333,-2932
chr22:36600529-36601520	chr22	+	36600571	36601153	True	NM_030643,NM_001136540,NM_145660	chr22,chr22,chr22	-,+,-	APOL4,APOL1,APOL4	96,47963,96
chr10:75005746-75006084	chr10	+	75005851	75006127	True	NM_173348,NM_015190,NM_016065	chr10,chr10,chr10	+,-,-	FAM149B1,DNAJC9,MRPS16	-78025,953,6379
chr12:53475496-53477279	chr12	+	53475676	53476979	True	NM_002178,NM_032840	chr12,chr12	+,-	IGFBP6,SPRYD3	14456,-2472
chr12:19592383-19592697	chr12	+	19592399	19592683	True	NM_033123,NM_153207,NM_001114176	chr12,chr12,chr12	-,+,+	PLCZ1,AEBP2,AEBP2	-701481,-58,-58
chr19:640479-640800	chr19	+	640555	640743	True	NM_005035,NM_020637	chr19,chr19	-,+	POLRMT,FGF22	-6987,-680
chr19:21578519-21579012	chr19	+	21578518	21579039	True	NM_175910,NM_145326,NM_001076678,NM_021269	chr19,chr19,chr19,chr19	+,+,+,-	ZNF493,ZNF493,ZNF493,ZNF708	881,881,881,-66306
chr3:130064811-130066118	chr3	+	130064963	130066107	True	NM_153264,NR_024252,NR_022012	chr3,chr3,chr3	+,-,+	COL6A5,LOC729375,COL6A5	-662,-234687,-662
chr22:35649047-35649771	chr22	+	35649148	35649714	True	NM_001003681,NR_027780,NM_005368	chr22,chr22,chr22	+,+,-	HMGXB4,HMGXB4,MB	3730,3730,363720
chr12:9979452-9980429	chr12	+	9979888	9980448	True	NM_005127,NM_016523	chr12,chr12	-,+	CLEC2B,KLRF1	42064,32
chr7:99155590-99156072	chr7	+	99155606	99156120	True	NM_001009958,NM_145111,NM_001009960,NM_138494,NM_001085368,NM_001083956,NM_024061,NM_001085367,NM_001085366	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,-,+,+,+,+,+,+,+	ZNF655,FAM200A,ZNF655,ZNF655,ZNF655,ZNF655,ZNF655,ZNF655,ZNF655	327,-5849,327,-10,327,-10,-10,327,-10
chr14:91589037-91589307	chr14	+	91589260	91589350	True	NM_001102369,NM_001102368,NM_001102367,NM_024952,NM_001102366,NR_003709,NM_182398	chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,+,+,+,-	C14orf159,C14orf159,C14orf159,C14orf159,C14orf159,SNORA11B,RPS6KA5	-8954,-8954,-8332,-8954,-8954,3419,-62267
chr18:43303017-43304348	chr18	+	43303073	43304405	True	NM_015865,NM_001146037,NM_001146036,NM_020964,NM_001128588	chr18,chr18,chr18,chr18,chr18	+,+,+,-,+	SLC14A1,SLC14A1,SLC14A1,EPG5,SLC14A1	127,2512,127,242960,127
chr17:36498022-36499168	chr17	+	36498035	36499089	True	NM_001004334,NM_014598	chr17,chr17	-,+	GPR179,SOCS7	654,8917
chr8:142351008-142351554	chr8	+	142351085	142351387	True	NR_024441,NM_005293	chr8,chr8	+,-	LOC731779,GPR20	-488,26028
chr4:57332533-57333464	chr4	+	57332699	57333437	True	NM_002703,NM_006947	chr4,chr4	-,+	PPAT,SRP72	-30897,324
chr2:55505205-55506043	chr2	+	55505206	55505849	True	NR_027258,NM_001005369,NM_002453	chr2,chr2,chr2	+,-,-	PRORSD1P,MTIF2,MTIF2	3605,-8891,-8822
chr21:39505227-39505925	chr21	+	39505343	39505973	True	NM_005867,NR_026842	chr21,chr21	-,+	DSCR4,DSCR8	-11889,-11855
chrX:125686091-125686455	chrX	+	125686192	125686470	True	NM_001122716,NM_178470	chrX,chrX	+,-	CXorf64,DCAF12L1	267276,422
chr7:45039503-45039767	chr7	+	45039651	45039717	True	NR_003697,NR_030770,NM_031443,NM_001167935,NM_001167934	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	C7orf40,CCM2,CCM2,CCM2,CCM2	-13392,-357,69,69,69
chrX:44336329-44336536	chrX	+	44336393	44336555	True	NM_022076,NM_173794	chrX,chrX	+,-	DUSP21,FUNDC1	366693,65716
chr4:54427109-54427850	chr4	+	54427121	54427866	True	NM_032622,NM_030917	chr4,chr4	-,+	LNX1,FIP1L1	-2685,-183358
chr4:103421222-103422165	chr4	+	103421274	103421953	True	NM_003998,NM_001165412,NM_001135146	chr4,chr4,chr4	+,+,-	NFKB1,NFKB1,SLC39A8	532,532,-154619
chr19:52229499-52230473	chr19	+	52229669	52230471	True	NM_001523,NR_024330	chr19,chr19	-,+	HAS1,NCRNA00085	-2448,-33127
chr15:52115306-52117032	chr15	+	52115745	52116841	True	NM_014547,NM_001143917	chr15,chr15	+,-	TMOD3,LYSMD2	4983,-72095
chr12:49211182-49211839	chr12	+	49211184	49211690	True	NM_000725,NM_020983	chr12,chr12	+,-	CACNB3,ADCY6	821,-28364
chr3:150989457-150991174	chr3	+	150989546	150990978	True	NM_053002,NM_014879	chr3,chr3	+,-	MED12L,P2RY14	-184930,5311
chr15:85426327-85427346	chr15	+	85426332	85427104	True	NM_201651,NM_004213,NM_014300	chr15,chr15,chr15	+,+,-	SLC28A1,SLC28A1,SEC11A	808,808,-166658
chr1:22778850-22779568	chr1	+	22779071	22779547	True	NM_014870,NM_030761,NM_001083621	chr1,chr1,chr1	+,-,+	ZBTB40,WNT4,ZBTB40	-778,-309552,-778
chr19:2097779-2097987	chr19	+	2097913	2097981	True	NM_001031735,NM_001039846,NM_130807	chr19,chr19,chr19	+,+,-	IZUMO4,IZUMO4,MOBKL2A	-1096,-1096,-1644
chr12:42633530-42634858	chr12	+	42633904	42634676	True	NM_001190977,NM_005748,NM_001190980,NR_034000,NM_001190979,NM_201438	chr12,chr12,chr12,chr12,chr12,chr12	-,-,-,-,-,+	YAF2,YAF2,YAF2,YAF2,YAF2,PPHLN1	-1815,-1750,-1753,-1753,-1753,85270
chr18:10456113-10456810	chr18	+	10456236	10456815	True	NM_153000,NM_022068	chr18,chr18	+,-	APCDD1,FAM38B	-1662,691997
chr10:99621506-99621862	chr10	+	99621516	99621890	True	NM_003015,NM_001010917	chr10,chr10	-,+	SFRP5,GOLGA7B	-89760,-11571
chr16:31164861-31165237	chr16	+	31164976	31165160	True	NM_173502,NM_001170634	chr16,chr16	-,+	PRSS36,FUS	-3561,26270
chr1:51702019-51702253	chr1	+	51702032	51702244	True	NM_001080494,NM_014372	chr1,chr1	-,+	TTC39A,RNF11	85744,-138
chr12:86199289-86199983	chr12	+	86199315	86199681	True	NM_006183,NM_005447	chr12,chr12	+,-	NTS,RASSF9	68391,30687
chr3:195274531-195276506	chr3	+	195274645	195276063	True	NR_003265,NM_006241	chr3,chr3	+,-	SDHAP2,PPP1R2	108846,-4421
chr14:66344173-66344604	chr14	+	66344193	66344657	True	NM_178157,NR_024334	chr14,chr14	+,-	FUT8,LOC645431	-208118,-464858
chr22:32847516-32848480	chr22	+	32847735	32848315	True	NM_174932,NM_012179	chr22,chr22	-,+	BPIL2,FBXO7	5108,22391
chr19:49149987-49150853	chr19	+	49150054	49150574	True	NM_001217,NM_001352,NR_004401	chr19,chr19,chr19	-,-,+	CA11,DBP,SEC1	-603,-9415,-8809
chr11:62607877-62608376	chr11	+	62607967	62608093	True	NM_003164,NM_018093,NM_001012662	chr11,chr11,chr11	-,-,+	STX5,WDR74,SLC3A2	-8407,-339,15390
chr19:46389898-46390201	chr19	+	46389941	46390169	True	NM_004497,NM_015649	chr19,chr19	+,-	FOXA3,IRF2BP1	-22474,-565
chr3:11265039-11266103	chr3	+	11265191	11265994	True	NM_001098211,NM_001128221	chr3,chr3	+,-	HRH1,VGLL4	1674,344455
chr1:53103292-53104767	chr1	+	53103532	53104530	True	NM_023077,NM_001042693	chr1,chr1	-,+	SELRC1,FAM159A	59559,-4520
chrY:24548666-24549586	chrY	+	24549220	24549298	True	NM_001006117,NR_002175	chrY,chrY	+,-	RBMY1J,TTTY6B	324,38336
chrY:24548666-24549586	chrY	-	24329413	24329491	False	NM_001006117,NR_002175,NM_152585	chrY,chrY,chrY	-,+,-	RBMY1J,TTTY6B,RBMY1F	-324,-38330,-324
chr17:74607017-74607522	chr17	+	74607159	74607395	True	NM_006456,NR_004395	chr17,chr17	-,+	ST6GALNAC2,SNORD1A	-25014,-49495
chr6:105404234-105405593	chr6	+	105404522	105405623	True	NM_001004317,NM_020771	chr6,chr6	+,-	LIN28B,HACE1	-134,-96728
chr1:95393459-95394144	chr1	+	95393473	95394178	True	NM_001839,NR_033998	chr1,chr1	-,+	CNN3,LOC729970	-738,52
chr8:7927665-7928433	chr8	+	7927667	7928247	True	NR_031689,NR_027424	chr8,chr8	-,+	MIR548I3,FAM66E	18414,-115183
chr8:7927665-7928433	chr8	-	7074605	7074921	False	NR_027000,NM_001164452	chr8,chr8	-,+	LOC349196,FAM90A14	46143,39504
chr8:7927665-7928433	chr8	-	7533201	7533517	False	NM_001136572,NM_001164452	chr8,chr8	-,+	FAM90A7,FAM90A14	-93026,39447
chrX:138725875-138726208	chrX	+	138725875	138726232	True	NM_001171879,NM_001171878,NM_005369,NM_000133,NM_001171877	chrX,chrX,chrX,chrX,chrX	-,-,-,+,-	MCF2,MCF2,MCF2,F9,MCF2	-875,-875,-875,-113039,-875
chr6:134499713-134500355	chr6	+	134499729	134500205	True	NM_004865,NM_001143678,NM_005627,NM_001143677	chr6,chr6,chr6,chr6	+,-,-,-	TBPL1,SGK1,SGK1,SGK1	-225479,-2659,-3695,-719
chr8:144910674-144910949	chr8	+	144910766	144910970	True	NM_078480,NR_033849,NM_014281,NM_001136033	chr8,chr8,chr8,chr8	-,+,-,-	PUF60,LOC100128338,PUF60,PUF60	617,-94507,617,276
chr11:108388251-108389461	chr11	+	108388307	108389351	True	NM_153705,NM_004398	chr11,chr11	-,+	KDELC2,DDX10	-19148,146464
chr7:16920078-16921697	chr7	+	16920383	16921713	True	NM_176813,NM_014399	chr7,chr7	-,+	AGR3,TSPAN13	-44,-127084
chr2:133234131-133235873	chr2	+	133234242	133235758	True	NM_001508,NM_144586	chr2,chr2	+,-	GPR39,LYPD1	-60146,192773
chr19:10381962-10382162	chr19	+	10382008	10382106	True	NM_000201,NM_001103167	chr19,chr19	+,-	ICAM1,ZGLP1	-542,38177
chr17:43481393-43482262	chr17_ctg5_hap1	+	96677	97381	False	NM_001159330,NM_001113738	chr17_ctg5_hap1,chr17_ctg5_hap1	-,+	ARHGAP27,ARL17A	1254,98339
chr17:43481393-43482262	chr17	+	43481541	43482245	True	NM_001159330,NR_024435	chr17,chr17	-,+	ARHGAP27,LOC100133991	1254,-142034
chr11:2921845-2922515	chr11	+	2921965	2922509	True	NM_183233,NM_007105,NM_002555	chr11,chr11,chr11	+,-,+	SLC22A18,SLC22A18AS,SLC22A18	-1065,2716,1002
chr11:31527866-31528799	chr11	+	31528097	31528194	True	NM_144981,NM_019040	chr11,chr11	-,+	IMMP1L,ELP4	3032,3102
chr9:99541102-99542466	chr9	+	99541239	99542403	True	NM_014930,NR_026792	chr9,chr9	-,+	ZNF510,LOC441455	-911,-53193
chr19:17420936-17422124	chr19	+	17420991	17421591	True	NM_024050,NM_024527,NM_023937	chr19,chr19,chr19	+,-,+	DDA1,ABHD8,MRPL34	-705,-6709,-4565
chrX:114935202-114936039	chrX	+	114935334	114935853	True	NM_020871,NM_001172335	chrX,chrX	-,+	LRCH2,PLS3	-466699,-107566
chr3:40429111-40429415	chr3	+	40429117	40429449	True	NM_001248,NR_033965	chr3,chr3	+,-	ENTPD3,FLJ33065	-495,-77928
chr7:1096937-1097142	chr7	+	1096937	1097161	True	NM_138445,NR_029898	chr7,chr7	+,-	GPR146,MIR339	-21,-34275
chr4:26859654-26860289	chr4	+	26859750	26860305	True	NM_001169118,NM_001169117,NM_000730,NM_020860	chr4,chr4,chr4,chr4	+,+,-,+	STIM2,STIM2,CCKAR,STIM2	2007,2007,-367708,2007
chr2:202475035-202477017	chr2	+	202476050	202476993	True	NM_001168217,NM_001168216,NM_001168221,NM_152525,NM_018571	chr2,chr2,chr2,chr2,chr2	-,-,-,-,+	ALS2CR11,ALS2CR11,ALS2CR11,ALS2CR11,STRADB	6962,6962,6962,6962,-159716
chr5:176740570-176741506	chr5	+	176740610	176741486	True	NM_130781,NM_013237,NM_001142935,NM_031300,NM_001031677	chr5,chr5,chr5,chr5,chr5	-,+,-,-,-	RAB24,PRELID1,MXD3,MXD3,RAB24	-9866,-9826,-1318,-1318,-9866
chr12:8490825-8491905	chr12	+	8491293	8491712	True	NM_001007033,NR_024420	chr12,chr12	+,-	CLEC6A,LOC389634	116878,51695
chr20:48599478-48599817	chr20	+	48599480	48599810	True	NM_006038,NM_005985	chr20,chr20	-,+	SPATA2,SNAI1	-67400,-18
chr10:42972950-42973240	chr10	+	42972971	42973050	True	NR_026777,NR_026827	chr10,chr10	-,+	ZNF37BP,LOC84856	75287,-2094
chr1:202853985-202855502	chr1	+	202854367	202854992	True	NM_002871,NR_002929	chr1,chr1	-,+	RABIF,LOC148709	3321,-23536
chr1:177088579-177089840	chr1	+	177088815	177089851	True	NM_004319,NM_021165	chr1,chr1	-,+	ASTN1,FAM5B	44223,50781
chr10:46895301-46896329	chr10	+	46895494	46895690	True	NR_027632,NM_181519	chr10,chr10	+,-	FAM35B,SYT15	1950,74973
chr10:46895301-46896329	chr10	+	88908974	88909124	False	NM_019054,NM_005271	chr10,chr10	+,-	FAM35A,GLUD1	-54079,-54198
chr10:46895301-46896329	chr10	+	47377682	47377764	False	NR_024495,NR_027634	chr10,chr10	-,+	LOC642826,FAM35B2	-134188,1955
chr10:46895301-46896329	chr10	+	49085244	49085440	False	NM_001137548,NM_002750	chr10,chr10	-,+	FAM25C,MAPK8	122447,524246
chr10:11783398-11783888	chr10	+	11783615	11783903	True	NM_014688,NM_024693	chr10,chr10	-,+	USP6NL,ECHDC3	-129936,452
chrX:16729033-16729562	chrX	+	16729102	16729602	True	NM_032796,NM_019857,NM_001144002,NR_033181,NM_175859	chrX,chrX,chrX,chrX,chrX	+,-,-,+,-	SYAP1,CTPS2,CTPS2,SYAP1,CTPS2	8104,1507,788,8104,1223
chr21:40146044-40146761	chr21	+	40146109	40146575	True	NM_005239,NR_027066,NR_027065	chr21,chr21,chr21	+,-,-	ETS2,NCRNA00114,NCRNA00114	31273,-5211,-708
chr15:90792298-90792533	chr15	+	90792465	90792537	True	NM_001029964,NM_006384	chr15,chr15	+,-	TTLL13,CIB1	226,-15186
chr4:24339615-24341452	chr4	+	24339827	24341255	True	NR_030299,NM_003102	chr4,chr4	-,+	MIR573,SOD3	180708,455829
chr11:16492885-16493299	chr11	+	16492935	16493343	True	NM_014267,NM_033326	chr11,chr11	+,-	C11orf58,SOX6	266804,4650
chr19:13987798-13988185	chr19	+	13987988	13988226	True	NM_001098622,NR_030179,NR_029613,NM_024323	chr19,chr19,chr19,chr19	+,+,+,-	NANOS3,MIR181D,MIR181C,C19orf57	-89,-2350,-2526,28733
chr2:42590137-42591245	chr2	+	42590391	42590971	True	NM_019063,NM_004718	chr2,chr2	+,-	EML4,COX7A2L	-193952,-2035
chr8:39442057-39442714	chr8	+	39442061	39442763	True	NM_001190956,NM_014237,NR_024107	chr8,chr8,chr8	+,+,-	ADAM18,ADAM18,ADAM3A	-25,-25,-61591
chr17:16337636-16337900	chr17	+	16337816	16337948	True	NR_027178,NR_027166,NR_027167,NR_027164,NR_027165,NR_027162,NR_027163,NR_027160,NR_027161,NR_027168,NR_027169,NR_002744,NR_027667,NR_027158,NR_003043,NR_003054,NR_027175,NR_027174,NR_027177,NR_027176,NR_027171,NR_027170,NR_027173,NR_027172,NR_027179,NR_027159,NM_001113567	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,-	NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,SNORD49A,NCRNA00188,NCRNA00188,SNORD49B,SNORD65,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,C17orf76	4352,4352,4352,4352,4352,4352,4352,4352,4352,4352,4352,5401,4352,4352,4874,6591,4352,4352,4352,4352,4352,4352,4352,4352,4352,4352,57582
chr12:131356965-131357625	chr12	+	131357282	131357668	True	NM_194356,NM_006325	chr12,chr12	-,+	STX2,RAN	-33471,-716
chr16:73085128-73086672	chr16	+	73085321	73086542	True	NM_006885,NM_001164766,NR_027756	chr16,chr16,chr16	-,-,+	ZFHX3,ZFHX3,HTA	-3047,6042,39705
chr1:120386170-120386952	chr1	+	120386378	120386978	True	NM_006623,NM_001047980	chr1,chr1	+,-	PHGDH,NBPF7	-132010,851
chr7:83801896-83802678	chr7	+	83802046	83802515	True	NM_006080,NM_000840	chr7,chr7	-,+	SEMA3A,GRM3	21761,2470714
chr20:23107306-23108377	chr20	+	23107420	23108380	True	NR_034149,NM_001052	chr20,chr20	-,+	LOC200261,SSTR4	4943,-91414
chr22:42078811-42079090	chr22	+	42078941	42079015	True	NM_005008,NM_001003796,NM_001142964	chr22,chr22,chr22	-,-,+	NHP2L1,NHP2L1,C22orf46	-385,5954,7531
chr5:89705422-89705831	chr5	+	89705430	89705814	True	NM_006467,NM_004365	chr5,chr5	+,-	POLR3G,CETN3	64866,-3
chr17:7492007-7492313	chr17	+	7492036	7492362	True	NM_001251,NM_001040059,NM_004870,NM_006942,NR_024603	chr17,chr17,chr17,chr17,chr17	+,+,+,-,+	CD68,CD68,MPDU1,SOX15,MPDU1	-9282,-9281,-5122,1176,-5122
chr20:30309787-30310003	chr20	+	30309914	30310028	True	NM_012112,NM_138578,NM_001191	chr20,chr20,chr20	+,-,-	TPX2,BCL2L1,BCL2L1	16875,678,678
chr19:41305732-41306177	chr19	+	41305841	41306087	True	NM_053046,NM_198476,NM_080732	chr19,chr19,chr19	+,-,+	EGLN2,C19orf54,EGLN2	-558,-50013,-844
chrX:53253059-53253611	chrX	+	53253063	53253610	True	NM_004187,NM_022117,NM_001146702	chrX,chrX,chrX	-,+,-	KDM5C,TSPYL2,KDM5C	1045,-141572,1045
chr14:20801119-20802107	chr14	+	20801126	20802138	True	NM_182851,NM_182852,NM_001042618,NR_002312,NM_182849,NR_003693,NM_005484,NM_021178	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	-,-,+,-,-,-,+,-	CCNB1IP1,CCNB1IP1,PARP2,RPPH1,CCNB1IP1,SNORD126,PARP2,CCNB1IP1	-3590,-3593,9634,9491,-5,-6428,9634,-5
chr12:9103832-9105081	chr12	+	9104367	9104906	True	NM_004426,NM_002355,NM_005810	chr12,chr12,chr12	+,-,+	PHC1,M6PR,KLRG1	-37102,-2115,37314
chr11:47238849-47239364	chr11	+	47238968	47239154	True	NM_000107,NM_016223	chr11,chr11	+,-	DDB2,PACSIN3	-2535,-30958
chr6:150173716-150174734	chr6	+	150173715	150174553	True	NM_025217,NM_032832	chr6,chr6	+,-	ULBP2,LRP11	88582,10977
chr12:53596599-53597233	chr12	+	53596692	53597009	True	NM_001004304,NM_000889	chr12,chr12	+,-	ZNF740,ITGB7	-22213,4054
chr21:46491273-46491818	chr21	+	46491348	46491595	True	NM_001112,NM_001160230,NR_027292,NM_015834,NR_027674,NR_027672,NR_027673,NM_015833	chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21	+,+,-,+,+,+,+,+	ADARB1,ADARB1,C21orf122,ADARB1,ADARB1,ADARB1,ADARB1,ADARB1	2897,2897,1582,2897,2897,2897,2897,2897
chr2:68022307-68022786	chr2	+	68022400	68022780	True	NM_001190263,NM_020143	chr2,chr2	-,+	C1D,PNO1	267429,362224
chr1:15481559-15482225	chr1	+	15481794	15482250	True	NM_018022,NM_001136217,NM_001136218,NM_001136216,NR_027136	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	TMEM51,TMEM51,TMEM51,TMEM51,C1orf126	-1616,-2817,-1616,-2817,-2834
chr1:228615181-228615989	chr1	+	228615411	228615805	True	NM_003493,NM_175055	chr1,chr1	-,+	HIST3H3,HIST3H2BB	-2385,30002
chr10:35619846-35621623	chr10	+	35619988	35621365	True	NM_001198777,NM_145012	chr10,chr10	-,+	CUL2,CCNY	-240418,4436
chr17:26802064-26803260	chr17	+	26802228	26803130	True	NM_080669,NM_003984,NM_001145976,NM_001145975,NR_027384	chr17,chr17,chr17,chr17,chr17	-,+,+,+,+	SLC46A1,SLC13A2,SLC13A2,SLC13A2,SLC13A2	-69000,-1615,-1615,-1615,-1615
chr6:80655242-80656208	chr6	+	80655318	80656086	True	NM_001166691,NM_022726	chr6,chr6	+,-	TTK,ELOVL4	58235,1279
chr15:23376868-23378034	chr15	+	23377002	23377896	True	NR_002824,NR_036470	chr15,chr15	-,+	HERC2P2,HERC2P7	413,12825
chr15:23376868-23378034	chr15	+	28566905	28566973	False	NM_004667,NR_033351	chr15,chr15	-,+	HERC2,GOLGA8F	372,56810
chr15:23376868-23378034	chr15	+	20710770	20711116	False	NR_036432,NR_027411	chr15,chr15	-,+	HERC2P3,GOLGA8C	367,56557
chr3:3836256-3838095	chr3	+	3836281	3837941	True	NM_016302,NM_020873	chr3,chr3	-,+	CRBN,LRRN1	-614880,3179
chr19:58962754-58962974	chr19	+	58962760	58963016	True	NM_207395,NM_003433	chr19,chr19	+,-	ZNF324B,ZNF132	26,-11171
chr5:178155652-178155923	chr5	+	178155833	178155949	True	NM_005649,NM_058230	chr5,chr5	-,+	ZNF354A,ZNF354B	1804,131004
chr5:178155652-178155923	chr5	-	178288122	178288184	False	NR_024035,NM_058230	chr5,chr5	-,+	AACSP1,ZNF354B	-84845,-1219
chr2:42419003-42419586	chr2	+	42419274	42419357	True	NM_019063,NM_004718	chr2,chr2	+,-	EML4,COX7A2L	-22840,169052
chr6:76130200-76131211	chr6	+	76130205	76131231	True	NM_015687,NM_001100409	chr6,chr6	-,+	FILIP1,SENP6	72315,180390
chr1:244602954-244604519	chr1	+	244603016	244604121	True	NM_001126,NM_001130957	chr1,chr1	-,+	ADSS,C1orf101	11366,20551
chr7:128766598-128766892	chr7	+	128766640	128766936	True	NR_002144,NR_034053	chr7,chr7	+,-	LOC407835,TNPO3	-366,-71413
chr11:61379941-61380348	chr11	+	61380227	61380313	True	NM_004200,NR_002775	chr11,chr11	-,+	SYT7,RPLP0P2	-31929,2194
chr16:89575951-89576473	chr16	+	89575987	89576185	True	NM_199367,NM_003119,NM_013275	chr16,chr16,chr16	+,+,-	SPG7,SPG7,ANKRD11	-1238,-1238,-19018
chr5:135656366-135657357	chr5	+	135656404	135657388	True	NM_001167576,NM_001001419	chr5,chr5	-,+	TRPC7,SMAD5	43826,-187920
chr19:39735980-39737209	chr19	+	39736084	39737174	True	NM_172139,NM_172138	chr19,chr19	-,+	IL28B,IL28A	-473,21982
chr19:39735980-39737209	chr19	-	39757055	39757285	False	NM_172139,NM_172138	chr19,chr19	-,+	IL28B,IL28A	-21444,1871
chr1:89349869-89351355	chr1	+	89350012	89350758	True	NM_006256,NM_001514	chr1,chr1	+,-	PKN2,GTF2B	-200155,6593
chr5:151066014-151066302	chr5	+	151066052	151066266	True	NM_003118,NM_005754	chr5,chr5	-,+	SPARC,G3BP1	301,85209
chr14:73449710-73451159	chr14	+	73449841	73450872	True	NM_178441,NM_181341	chr14,chr14	-,+	ZFYVE1,DCAF4	2842,-56860
chr7:73704315-73704730	chr7	+	73704422	73704730	True	NM_181471,NM_003388,NM_032421	chr7,chr7,chr7	-,+,+	RFC2,CLIP2,CLIP2	-35684,-668,-668
chr7:150674210-150674486	chr7	+	150674216	150674524	True	NM_000238,NM_172056,NM_000603	chr7,chr7,chr7	-,-,+	KCNH2,KCNH2,NOS3	928,928,13619
chr20:44516244-44517456	chr20	+	44516334	44517431	True	NM_080749,NM_080608,NM_001167594,NM_080603,NM_000308,NM_001127695	chr20,chr20,chr20,chr20,chr20,chr20	-,-,+,+,+,+	NEURL2,C20orf165,CTSA,ZSWIM1,CTSA,CTSA	2520,-96,2159,-6544,2159,2159
chrY:13311296-13311530	chrY	+	13311351	13311515	True	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	1462782,1221924
chr5:131625357-131627292	chr5	+	131625551	131627268	True	NM_003059,NM_001142599	chr5,chr5	+,-	SLC22A4,P4HA2	2876,-61995
chr19:42806825-42807468	chr19	+	42806871	42807514	True	NM_199285,NM_173633,NM_002573,NM_001145939,NM_001145940	chr19,chr19,chr19,chr19,chr19	+,+,-,-,-	PRR19,TMEM145,PAFAH1B3,PAFAH1B3,PAFAH1B3	-638,9962,-75,26,49
chrX:39726960-39727430	chrX	+	39726978	39727399	True	NM_005765,NM_001123385	chrX,chrX	+,-	ATP6AP2,BCOR	712816,229371
chr3:109054922-109055573	chr3	+	109055182	109055578	True	NM_018189,NM_001145553	chr3,chr3	-,+	DPPA4,FLJ25363	891,73258
chr9:139887831-139888103	chr9	+	139887856	139888002	True	NM_183241,NM_004669	chr9,chr9	+,-	C9orf142,CLIC3	-1037,3072
chr5:67522769-67523841	chr5	+	67522789	67523821	True	NM_005582,NM_181523	chr5,chr5	-,+	CD180,PIK3R1	-1030172,-378
chr15:76356921-76357686	chr15	+	76356929	76357725	True	NM_152335,NM_138573	chr15,chr15	+,-	C15orf27,NRG4	-4681,-52144
chr7:35067249-35068246	chr7	+	35067503	35068286	True	NM_015283,NM_207173	chr7,chr7	-,+	DPY19L1,NPSR1	9420,-369666
chr12:10009601-10010709	chr12	+	10009624	10010723	True	NM_005127,NM_001190765	chr12,chr12	-,+	CLEC2B,KLRF2	11786,23364
chr2:219745874-219746919	chr2	+	219746291	219746827	True	NM_017431,NM_025216	chr2,chr2	-,+	PRKAG3,WNT10A	-49779,-1087
chr10:98017854-98018813	chr10	+	98017983	98018847	True	NM_001017520,NM_001114094	chr10,chr10	+,-	DNTT,BLNK	45237,12536
chr12:74931780-74932005	chr12	+	74931840	74931992	True	NM_001136262,NM_139136	chr12,chr12	+,-	ATXN7L3B,KCNC2	-340,671569
chr13:49840115-49841855	chr13	+	49840117	49841825	True	NM_030925,NR_036439	chr13,chr13	-,+	CAB39L,CDADC1	133967,-18121
chr15:64442775-64443194	chr15	+	64442822	64443242	True	NM_024798,NM_000942	chr15,chr15	+,-	SNX22,PPIB	673,12162
chr11:76092415-76092745	chr11	+	76092439	76092774	True	NM_020193,NM_004705	chr11,chr11	+,-	C11orf30,PRKRIR	63294,-559
chr15:63453428-63454177	chr15	+	63453486	63454200	True	NM_016530,NM_015920	chr15,chr15	+,-	RAB8B,RPS27L	27527,-3745
chr22:16289100-16289425	chr22	+	16289304	16289382	True	NR_001591,NM_001136213	chr22,chr22	+,-	psiTPTE22,POTEH	793418,-1367
chr8:124431632-124433318	chr8	+	124431674	124432298	True	NM_018024,NM_014109	chr8,chr8	+,-	WDYHV1,ATAD2	-2763,-22969
chr11:125495921-125496184	chr11	+	125495959	125496089	True	NM_001114122,NM_001274,NM_001114121,NM_001612	chr11,chr11,chr11,chr11	+,+,+,-	CHEK1,CHEK1,CHEK1,ACRV1	-974,222,-974,54754
chr3:169383638-169384366	chr3	+	169383747	169384360	True	NM_001205194,NM_004991,NM_001185118	chr3,chr3,chr3	-,-,+	MECOM,MECOM,MYNN	-2184,-2184,106492
chr11:117184309-117185247	chr11	+	117184445	117185287	True	NM_014956,NM_138973,NM_012104,NM_138971,NM_138972	chr11,chr11,chr11,chr11,chr11	+,-,-,-,-	CEP164,BACE1,BACE1,BACE1,BACE1	13283,1735,1735,1735,1735
chr5:41925083-41925597	chr5	+	41925087	41925539	True	NM_033484,NM_012176,NM_000436	chr5,chr5,chr5	+,+,-	FBXO4,FBXO4,OXCT1	-58,-58,-54296
chr5:149785949-149786555	chr5	+	149785961	149786209	True	NM_004355,NM_001025158,NM_001025159,NM_001195141	chr5,chr5,chr5,chr5	-,-,-,+	CD74,CD74,CD74,TCOF1	6164,6173,6164,-48810
chr6:39070287-39071970	chr6	+	39070396	39071982	True	NM_018322,NM_002062	chr6,chr6	-,+	C6orf64,GLP1R	10933,-53890
chr4:17616702-17617154	chr4	+	17616739	17617022	True	NM_025205,NM_000320	chr4,chr4	+,-	MED28,QDPR	-517,-102882
chrX:140678616-140679132	chrX	+	140678705	140678876	True	NM_013453,NM_145662	chrX,chrX	+,+	SPANXA1,SPANXA2	-897,-921
chrX:140678616-140679132	chrX	-	140335608	140335699	False	NM_022661,NM_145664	chrX,chrX	-,+	SPANXC,SPANXB2	1004,-238907
chrX:140678616-140679132	chrX	-	140785593	140785671	False	NM_032417,NM_013453,NM_145665	chrX,chrX,chrX	-,+,-	SPANXD,SPANXA1,SPANXE	984,-107785,1041
chrX:140678616-140679132	chrX	-	140671818	140671989	False	NM_013453,NM_145662	chrX,chrX	-,-	SPANXA1,SPANXA2	897,921
chr19:14224990-14225748	chr19	+	14225137	14225589	True	NR_024282,NM_207518,NM_002730	chr19,chr19,chr19	+,-,-	LOC113230,PRKACA,PRKACA	-41367,-145,3020
chr11:307027-307579	chr11	+	307039	307495	True	NM_006435,NM_003641,NM_001025295	chr11,chr11,chr11	+,+,-	IFITM2,IFITM1,IFITM5	611,6495,-7513
chr8:98880771-98881050	chr8	+	98880832	98880894	True	NR_002581,NM_030583,NM_002380	chr8,chr8,chr8	-,+,+	SNORA72,MATN2,MATN2	173601,416,416
chr13:114052335-114052759	chr13	+	114052476	114052774	True	NM_024719,NM_017905	chr13,chr13	-,+	GRTP1,TMCO3	-34013,92533
chr13:28564053-28565852	chr13	+	28564158	28565576	True	NM_001105577,NR_002162	chr13,chr13	-,+	PRHOXNB,ATP5EP2	-1384,-44875
chr1:144708833-144710177	chr1	+	144708836	144709990	True	NR_037182,NM_001037675	chr1,chr1	-,+	LOC653513,NBPF9	-28811,-93928
chr1:144708833-144710177	chr1	+	144984156	144985110	False	NM_014644,NM_001198834,NM_004892,NM_001002812,NM_001002810	chr1,chr1,chr1,chr1,chr1	-,-,+,-,-	PDE4DIP,PDE4DIP,SEC22B,PDE4DIP,PDE4DIP	9970,9981,111296,9970,9981
chr3:37514878-37516075	chr3	+	37515033	37516062	True	NM_002207,NM_017724	chr3,chr3	+,-	ITGA9,LRRFIP2	-21273,-297182
chr14:74817055-74817412	chr14	+	74817140	74817452	True	NR_003256,NM_018228	chr14,chr14	-,+	ABCD4,VRTN	-47373,-2025
chr4:4863433-4863882	chr4	+	4863472	4863886	True	NM_002448,NM_018659	chr4,chr4	+,-	MSX1,CYTL1	-2131,157361
chr9:88873559-88873806	chr9	+	88873764	88873854	True	NM_024635,NM_001010907	chr9,chr9	+,-	NAA35,C9orf153	-317768,725
chr5:140188390-140188608	chr5	+	140188423	140188607	True	NM_031500,NM_031497,NM_018907,NM_018906,NM_002109	chr5,chr5,chr5,chr5,chr5	+,+,+,+,-	PCDHA4,PCDHA3,PCDHA4,PCDHA3,HARS	-1802,-7691,-1802,-7691,-117452
chr5:176810814-176812121	chr5	+	176810888	176811432	True	NM_001029886,NM_001167579,NM_003052	chr5,chr5,chr5	-,+,+	PFN3,SLC34A1,SLC34A1	16255,-1,-1
chr14:77354648-77355418	chr14	+	77354656	77355442	True	NM_015305,NM_194287	chr14,chr14	-,+	ANGEL1,C14orf166B	-75373,-61982
chr21:35823776-35824465	chr21	+	35823824	35824418	True	NM_001127670,NM_001127669,NM_001127668,NM_058182	chr21,chr21,chr21,chr21	-,-,-,+	KCNE1,KCNE1,KCNE1,FAM165B	3695,7534,7534,-76126
chr17:74730462-74732350	chr17	+	74730513	74732155	True	NR_036608,NM_001080510,NR_030366,NM_001081461,NM_003016,NM_024311,NM_001195427,NM_015167	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,-,-,-,+,-,-	SRSF2,METTL23,MIR636,JMJD6,SRSF2,MFSD11,SRSF2,JMJD6	1388,-7614,525,-7632,1388,1627,1388,-7632
chr16:103886-104097	chr16	+	103948	104064	True	NM_016310,NM_024571	chr16,chr16	-,+	POLR3K,SNRNP25	-316,-170
chr11:20180684-20181329	chr11	+	20180744	20181378	True	NM_001111019,NM_001029865	chr11,chr11	+,-	NAV2,DBX1	-136159,542
chr2:51254665-51254930	chr2	+	51254669	51254865	True	NM_001135659,NM_006872,NM_004801	chr2,chr2,chr2	-,+,-	NRXN1,GTF2A1L,NRXN1	4859,-2409783,4859
chr3:52009297-52009947	chr3	+	52009423	52009961	True	NM_001198898,NM_001198896,NM_000666,NM_001174100,NM_001198895,NM_001146314,NR_027476,NM_015407,NM_001198897,NR_037192,NM_033008,NM_032750,NM_020418	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,-,+,-,-,+,+,+,-,-,-	ACY1,ACY1,ACY1,PCBP4,ACY1,ABHD14B,ABHD14B,ABHD14A,ACY1,ABHD14A-ACY1,PCBP4,ABHD14B,PCBP4	7338,7338,7338,-7941,7338,-777,-777,-432,7338,-432,-7941,-777,-7973
chr17:11144954-11145180	chr17	+	11145025	11145173	True	NM_001101387,NM_001173461,NM_001173462,NM_207386	chr17,chr17,chr17,chr17	-,+,+,+	PIRT,SHISA6,SHISA6,SHISA6	-403607,-336,-336,-336
chr7:139763121-139764204	chr7	+	139763181	139763968	True	NM_022750,NR_024451	chr7,chr7	-,+	PARP12,LOC100134229	76,113092
chr6:39760423-39760639	chr6	+	39760468	39760686	True	NM_145027,NM_001201427,NM_015345	chr6,chr6,chr6	-,+,+	KIF6,DAAM2,DAAM2	-67287,-360,86
chr2:204100471-204100962	chr2	+	204100695	204100872	True	NM_213589,NM_177538	chr2,chr2	-,+	RAPH1,CYP20A1	299239,2291
chr9:33599580-33600494	chr9	+	33599603	33600199	True	NR_023917,NR_003573	chr9,chr9	-,+	PTENP1,ANXA2P2	77269,24023
chr5:121415304-121415758	chr5	+	121415338	121415514	True	NM_002317,NM_207317,NM_001178102	chr5,chr5,chr5	-,+,-	LOX,ZNF474,LOX	-1283,49700,-2420
chr7:26239777-26239991	chr7	+	26239794	26239916	True	NM_002137,NM_007276,NM_031243,NM_016587	chr7,chr7,chr7,chr7	-,+,-,+	HNRNPA2B1,CBX3,HNRNPA2B1,CBX3	547,914,547,1407
chr5:305662-306740	chr5	+	305841	306771	True	NM_020731,NM_145265	chr5,chr5	+,-	AHRR,CCDC127	-1601,-87544
chr12:15484012-15484271	chr12	+	15484032	15484288	True	NM_002848,NM_032918,NM_030667	chr12,chr12,chr12	+,-,+	PTPRO,RERG,PTPRO	-8604,-109621,-8604
chr16:66959826-66961399	chr16	+	66959826	66961416	True	NM_003869,NM_016062,NR_036684,NM_001204746,NM_001204744,NM_001204745,NR_024525,NM_001128850,NM_004165,NM_198061,NM_004062	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,-,+,-,-,-,-,-,-,+,-	CES2,FAM96B,CES2,CDH16,CDH16,CDH16,FAM96B,RRAD,RRAD,CES2,CDH16	6930,6954,6957,-6939,-6939,-6939,6954,-387,-387,6930,-6939
chr10:69868570-69869265	chr10	+	69868769	69869301	True	NM_032578,NM_022079	chr10,chr10	+,-	MYPN,HERC4	-16,-33666
chr18:33553807-33555721	chr18	+	33553967	33555769	True	NR_029616,NM_031446,NM_001201476,NM_001201475,NM_001201474	chr18,chr18,chr18,chr18,chr18	-,+,+,+,+	MIR187,C18orf21,C18orf21,C18orf21,C18orf21	-69078,-1430,-1430,-1430,-1430
chr1:41699309-41700268	chr1	+	41699371	41699731	True	NM_012236,NM_001172218,NM_001172219,NR_037868,NM_001172220	chr1,chr1,chr1,chr1,chr1	-,-,-,+,-	SCMH1,SCMH1,SCMH1,LOC100507178,SCMH1	8134,8134,8134,-219166,8134
chr6:101191048-101191359	chr6	+	101191238	101191408	True	NM_001166247,NM_006828	chr6,chr6	+,-	GRIK2,ASCC3	655452,137866
chr17:48548647-48549790	chr17	+	48548841	48549751	True	NM_018346,NM_001267	chr17,chr17	+,-	RSAD1,CHAD	6438,-2614
chr15:36871275-36871861	chr15	+	36871327	36871809	True	NM_001130010,NR_027320	chr15,chr15	+,-	C15orf41,CSNK1A1P1	2,238948
chr12:50693883-50695567	chr12	+	50694014	50695571	True	NM_016357,NM_001170804	chr12,chr12	-,+	LIMA1,LARP4	-16661,99020
chr19:49619650-49619926	chr19	+	49619788	49619900	True	NM_022165,NM_003660,NM_018111	chr19,chr19,chr19	+,+,-	LIN7B,PPFIA3,C19orf73	-2221,2762,2547
chr5:138732191-138732596	chr5	+	138732190	138732638	True	NM_001033112,NM_016459,NM_194296,NM_001161546	chr5,chr5,chr5,chr5	+,-,-,-	PAIP2,MZB1,SPATA24,LOC389333	-54107,-6585,7188,-1305
chr11:61249889-61250797	chr11	+	61250005	61250395	True	NM_001136040,NM_145017,NM_001170753	chr11,chr11,chr11	-,+,+	CPSF7,C11orf66,C11orf66	-52541,-1471,-1471
chr20:38612132-38612515	chr20	+	38612219	38612531	True	NR_033905,NM_005461	chr20,chr20	+,-	DHX35,MAFB	-1021289,705395
chr1:179919422-179920448	chr1	+	179920159	179920297	True	NM_014810,NM_022347	chr1,chr1	+,-	CEP350,TOR1AIP2	3610,-73218
chr12:122687828-122688069	chr12	+	122687853	122688011	True	NM_030765,NM_019887	chr12,chr12	+,-	B3GNT4,DIABLO	216,24107
chr10:70588386-70589127	chr10	+	70588460	70588860	True	NM_152709,NM_001130159,NM_001130161,NM_001130162,NM_152707,NM_001130160	chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,-,+	STOX1,STOX1,STOX1,STOX1,SLC25A16,STOX1	-1218,-1218,-1218,-949,-301180,-1218
chr2:70475489-70475693	chr2	+	70475595	70475739	True	NM_016297,NM_022173,NM_022037	chr2,chr2,chr2	+,-,-	PCYOX1,TIA1,TIA1	9491,90,90
chr10:14815893-14816333	chr10	+	14815981	14816273	True	NM_031453,NM_016299	chr10,chr10	-,+	FAM107B,HSPA14	673,63987
chr2:98963224-98963447	chr2	+	98963223	98963477	True	NM_001008215,NM_001298,NM_001079878	chr2,chr2,chr2	-,+,+	C2orf64,CNGA3,CNGA3	261528,-656,-656
chr10:91296250-91296716	chr10	+	91296320	91296470	True	NM_213606,NM_012420	chr10,chr10	-,+	SLC16A12,IFIT5	-1007,-122046
chr13:96736694-96738505	chr13	+	96736847	96738321	True	NM_153456,NM_020121	chr13,chr13	+,-	HS6ST3,UGGT2	4771,-31111
chr13:41333456-41333742	chr13	+	41333615	41333753	True	NM_005830,NM_014252	chr13,chr13	-,+	MRPS31,SLC25A15	11650,29793
chr18:44544155-44544456	chr18	+	44544177	44544427	True	NM_145653,NM_001100817,NM_031303	chr18,chr18,chr18	-,-,+	TCEB3C,TCEB3CL,KATNAL2	6157,-6,-17441
chr18:44544155-44544456	chr18	+	44550104	44550354	False	NM_145653,NM_001100817,NM_031303	chr18,chr18,chr18	-,-,+	TCEB3C,TCEB3CL,KATNAL2	230,-6,-23368
chr18:44544155-44544456	chr18	+	44561441	44561599	False	NM_145653,NM_001100817,NM_016427,NM_031303	chr18,chr18,chr18,chr18	-,-,-,+	TCEB3C,TCEB3CL,TCEB3B,KATNAL2	-4992,-5228,439,-34705
chr18:44544155-44544456	chr18	+	44556019	44556269	False	NM_145653,NM_001100817,NM_016427,NM_031303	chr18,chr18,chr18,chr18	-,-,-,+	TCEB3C,TCEB3CL,TCEB3B,KATNAL2	230,-6,5769,-29283
chr1:221914150-221914606	chr1	+	221914286	221914638	True	NM_021958,NM_144729,NM_144728,NM_007207	chr1,chr1,chr1,chr1	+,-,-,-	HLX,DUSP10,DUSP10,DUSP10	-861595,928,-3484,928
chr7:134698665-134700485	chr7	+	134699295	134700486	True	NM_178563,NM_024033	chr7,chr7	+,-	AGBL3,C7orf49	-28094,155097
chr17:43023165-43023945	chr17	+	43023688	43024002	True	NM_001080443,NM_213607	chr17,chr17	-,+	KIF18B,CCDC103	1142,-46594
chr14:24776618-24777070	chr14	+	24776668	24777036	True	NM_001164692,NM_174913,NM_001136050,NM_019839,NM_138452,NM_001143919,NM_181657,NM_014430	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,+,-,+,-,+,+,-	LTB4R2,C14orf21,DHRS1,LTB4R2,DHRS1,LTB4R,LTB4R,CIDEB	2320,-7621,-7629,2320,-8002,3668,5276,3590
chr1:223537379-223537606	chr1	+	223537379	223537541	True	NM_017982,NM_152610,NM_001037175	chr1,chr1,chr1	-,+,-	SUSD4,C1orf65,SUSD4	53,29173,53
chr22:27138737-27139226	chr22	+	27138997	27139227	True	NR_033321,NM_001887	chr22,chr22	+,-	MIAT,CRYBB1	-85602,-125006
chr14:76842170-76842535	chr14	+	76842244	76842488	True	NM_004452,NM_003239	chr14,chr14	+,-	ESRRB,TGFB3	-4605,-394152
chr10:70748453-70748669	chr10	+	70748475	70748705	True	NM_001057,NM_015634	chr10,chr10	-,+	TACR2,KIAA1279	428019,-49
chr11:61101271-61102218	chr11	+	61101274	61102084	True	NM_001923,NM_015533	chr11,chr11	-,+	DDB1,DAK	-608,-671
chr16:10525839-10526445	chr16	+	10525983	10526262	True	NM_024997,NM_001424	chr16,chr16	+,-	ATF7IP2,EMP2	-3320,148336
chr10:99274599-99275694	chr10	+	99274699	99275529	True	NM_022362,NM_024954	chr10,chr10	-,+	MMS19,UBTD1	-16333,-15982
chr22:45096063-45096968	chr22	+	45096508	45096747	True	NM_181333,NM_181334,NM_032287	chr22,chr22,chr22	+,+,-	PRR5,PRR5-ARHGAP8,LDOC1L	1330,1634,-202503
chr19:51857686-51859182	chr19	+	51857771	51858301	True	NM_001014763,NM_001101372	chr19,chr19	-,+	ETFB,IGLON5	-98,-42720
chr20:46755002-46755304	chr20	+	46755080	46755344	True	NR_026958,NM_198596	chr20,chr20	+,-	LOC284749,SULF2	233309,-339720
chr13:24882948-24883201	chr13	+	24882995	24883222	True	NM_178540,NM_006437	chr13,chr13	+,-	C1QTNF9,PARP4	493,203777
chr11:24564585-24565416	chr11	+	24564773	24565448	True	NM_001009909,NM_001195637	chr11,chr11	+,-	LUZP2,LOC100500938	-46277,-1682801
chr12:122462879-122463251	chr12	+	122462932	122463134	True	NM_001171993,NM_020993,NM_001024808	chr12,chr12,chr12	-,+,+	HPD,BCL7A,BCL7A	-136415,-3122,-3122
chr1:85922381-85923418	chr1	+	85922430	85923244	True	NM_001554,NM_012137	chr1,chr1	+,-	CYR61,DDAH1	123199,7705
chr14:90422563-90422789	chr14	+	90422595	90422789	True	NM_145231,NM_018319,NM_001008744	chr14,chr14,chr14	-,+,+	EFCAB11,TDP1,TDP1	-1506,-400,-400
chr15:63246326-63246820	chr15	+	63246404	63246525	True	NM_000366,NM_015920	chr15,chr15	+,-	TPM1,RPS27L	88312,203273
chr19:35784003-35784691	chr19	+	35784076	35784490	True	NM_001199216,NM_152481,NM_080600,NM_002361	chr19,chr19,chr19,chr19	+,-,+,+	MAG,FAM187B,MAG,MAG	-1138,-64448,-1138,-1138
chr16:90116941-90117950	chr16	+	90117103	90117579	True	NR_027336,NR_027335,NR_023348	chr16,chr16,chr16	-,-,+	LOC100130015,LOC100130015,GAS8	-2912,-3070,-28153
chr13:20533620-20533833	chr13	+	20533748	20533822	True	NM_001039650,NM_197968,NM_003453,NM_001190964,NM_001190965	chr13,chr13,chr13,chr13,chr13	-,+,+,+,+	ZMYM5,ZMYM2,ZMYM2,ZMYM2,ZMYM2	-95972,-989,-989,-951,-825
chr2:162898732-162899787	chr2	+	162898767	162899812	True	NM_001935,NM_012198	chr2,chr2	-,+	DPP4,GCA	31290,300770
chr1:24966732-24967198	chr1	+	24967076	24967181	True	NM_005839,NM_001199012	chr1,chr1	+,-	SRRM1,C1orf201	2412,-225489
chr1:226592252-226592622	chr1	+	226592347	226592639	True	NM_001618,NM_001003665	chr1,chr1	-,+	PARP1,C1orf95	3212,143861
chr17:30264739-30265132	chr17	+	30264794	30265120	True	NM_018428,NM_015355	chr17,chr17	-,+	UTP6,SUZ12	-36065,-801
chr17:30264739-30265132	chr17	+	29059396	29059722	False	NM_015986,NR_024187	chr17,chr17	-,+	CRLF3,SUZ12P	92106,-22821
chr5:140740505-140740770	chr5	+	140740512	140740818	True	NM_018924,NM_032097,NM_018923,NM_032096,NM_032054,NM_018918,NM_032053,NM_005642,NM_018917	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,+,-,+	PCDHGB3,PCDHGB3,PCDHGB2,PCDHGB2,PCDHGA5,PCDHGA5,PCDHGA4,TAF7,PCDHGA4	9143,9143,-861,-861,3079,3079,-5796,-40161,-5796
chr20:35486410-35487714	chr20	+	35486462	35487694	True	NM_080628,NM_080627,NM_199181	chr20,chr20,chr20	+,-,-	C20orf118,KIAA0889,KIAA0889	16875,4443,632
chr2:219923905-219924271	chr2	+	219923920	219924310	True	NR_024385,NM_002181,NR_036081	chr2,chr2,chr2	+,-,-	LOC151300,IHH,MIR3131	-82965,978,-448
chr14:27066156-27066376	chr14	+	27066174	27066300	True	NM_002515,NM_006489,NR_036193,NM_006491	chr14,chr14,chr14,chr14	-,-,+,-	NOVA1,NOVA1,MIR4307,NOVA1	718,718,311547,718
chr1:16134103-16134311	chr1	+	16134119	16134366	True	NM_001089591,NM_015001	chr1,chr1	-,+	UQCRHL,SPEN	45,39992
chr7:135412286-135413021	chr7	+	135412325	135412893	True	NM_001130929,NM_012450	chr7,chr7	+,-	PL-5283,SLC13A4	-65155,90
chr1:36532083-36533030	chr1	+	36532312	36532883	True	NM_005202,NM_014466	chr1,chr1	-,+	COL8A2,TEKT2	33017,16792
chr8:144294556-144294800	chr8	+	144294605	144294737	True	NM_178172,NM_001130478	chr8,chr8	+,-	GPIHBP1,LY6H	330,-52552
chr13:51671965-51672327	chr13	+	51672027	51672337	True	NR_003923,NM_145019	chr13,chr13	-,+	GUCY1B2,FAM124A	-31734,124169
chr2:97931641-97932156	chr2	+	97931739	97932015	True	NM_199336,NM_001164315	chr2,chr2	-,+	FAHD2B,ANKRD36	-171157,-152557
chr2:97931641-97932156	chr2	-	98107377	98107653	False	NM_025190,NM_001862	chr2,chr2	-,+	ANKRD36B,COX5B	98825,154867
chr1:43122156-43123995	chr1	+	43122927	43123863	True	NM_006347,NM_001123395	chr1,chr1	+,-	PPIH,CLDN19	184,82112
chr2:207579085-207580533	chr2	+	207579217	207580186	True	NM_001093730,NM_001136193	chr2,chr2	-,+	DYTN,FASTKD2	2984,49925
chr12:56364970-56365976	chr12	+	56365002	56365965	True	NM_001798,NM_002868,NM_001200053,NM_006928,NM_001200054,NM_052827	chr12,chr12,chr12,chr12,chr12,chr12	+,+,-,-,-,+	CDK2,RAB5B,PMEL,PMEL,PMEL,CDK2	-4497,1896,-5156,-4506,-5156,-4497
chr18:67069550-67070163	chr18	+	67069566	67070190	True	NM_152721,NM_006566	chr18,chr18	+,-	DOK6,CD226	-1333,554092
chr8:41357116-41358868	chr8	+	41357404	41358437	True	NM_001174124,NM_016099,NM_152568,NM_001002296	chr8,chr8,chr8,chr8	+,+,-,+	GOLGA7,GOLGA7,NKX6-3,GOLGA7	-9381,-9381,146492,-9289
chr1:161041904-161042992	chr1	+	161042067	161042899	True	NR_033385,NM_001025598,NM_181720	chr1,chr1,chr1	+,-,-	KLHDC9,ARHGAP30,ARHGAP30	25251,-2307,-2307
chr6:7544388-7546209	chr6	+	7544484	7546134	True	NM_004415,NM_001008844,NM_001170693	chr6,chr6,chr6	+,+,-	DSP,DSP,CAGE1	-2665,-2665,-154542
chrX:30250812-30251176	chrX	+	30250972	30251034	True	NM_000475,NM_002365,NM_002367	chrX,chrX,chrX	-,+,+	NR0B1,MAGEB3,MAGEB4	76511,-2470,9022
chr1:1167953-1168237	chr1	+	1168019	1168151	True	NM_080605,NM_016547,NM_016176	chr1,chr1,chr1	+,-,-	B3GALT6,SDF4,SDF4	-441,-572,-572
chr21:27027883-27028825	chr21	+	27028111	27028865	True	NM_021219,NM_080794	chr21,chr21	+,-	JAM2,MRPL39	-16575,-48310
chr16:68346294-68347712	chr16	+	68346450	68347687	True	NM_032178,NM_019023,NM_001184824	chr16,chr16,chr16	-,+,+	SLC7A6OS,PRMT7,PRMT7	-1582,-1625,-1625
chr12:39836882-39837098	chr12	+	39836884	39837116	True	NM_001173464,NM_001173465,NM_001031748,NM_017641,NM_001173463	chr12,chr12,chr12,chr12,chr12	-,-,+,-,-	KIF21A,KIF21A,C12orf40,KIF21A,KIF21A	126,126,182855,126,126
chr20:22564264-22564509	chr20	+	22564359	22564463	True	NM_021784,NM_153675,NR_001558,NM_001052	chr20,chr20,chr20,chr20	-,-,-,+	FOXA2,FOXA2,NCRNA00261,SSTR4	688,1688,-5079,451593
chr7:89744606-89746244	chr7	+	89745835	89746265	True	NR_003551,NM_152706	chr7,chr7	+,-	DPY19L2P4,C7orf62	2448,-1320804
chr7:89744606-89746244	chr7	-	35228258	35228598	False	NM_001077653,NM_207173	chr7,chr7	-,+	TBX20,NPSR1	65176,-530418
chrX:129242037-129243060	chrX	+	129242438	129243042	True	NM_001127197,NM_001421,NM_004794	chrX,chrX,chrX	-,-,+	ELF4,ELF4,RAB33A	1696,1483,62730
chr11:69059987-69060674	chr11	+	69060106	69060674	True	NM_145015,NM_138768	chr11,chr11	-,+	MRGPRF,MYEOV	-279256,947
chr2:74610124-74610920	chr2	+	74610309	74610935	True	NM_001135040,NM_001135041,NM_001190836,NM_023019,NM_001190837,NR_024463,NR_033935,NM_004082	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	-,-,-,-,-,+,-,-	DCTN1,DCTN1,DCTN1,DCTN1,DCTN1,LOC100189589,DCTN1,DCTN1	-2827,-8447,8329,-8447,-2827,1909,8329,-2827
chr19:47355956-47356742	chr19	+	47356259	47356598	True	NM_021575,NM_004069,NM_004491	chr19,chr19,chr19	-,-,+	AP2S1,AP2S1,GRLF1	-2056,-2056,65334
chr4:20701855-20702137	chr4	+	20701987	20702149	True	NM_001130727,NM_147181,NM_145048	chr4,chr4,chr4	+,-,+	PACRGL,KCNIP4,PACRGL	-2,150192,-2
chr3:129116325-129117561	chr3	+	129116380	129117408	True	NR_003111,NM_018262,NR_002992	chr3,chr3,chr3	-,+,-	RPL32P3,IFT122,SNORA7B	924,41559,-189
chrX:99169481-99171362	chrX	+	99169545	99171171	True	NM_022144,NR_024608	chrX,chrX	+,-	TNMD,LOC442459	668618,23733
chr5:64922485-64924389	chr5	+	64922984	64924194	True	NM_024941,NM_001656,NM_033228,NM_001093756,NM_033227,NR_003545,NM_001093755	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,-,-,+,-,+,+	C5orf44,TRIM23,TRIM23,C5orf44,TRIM23,C5orf44,C5orf44	-2484,-2797,-2797,-2484,-2797,-2484,-2484
chr7:27164422-27165728	chr7	+	27164483	27165711	True	NM_030661,NM_153631,NR_002795,NM_002141	chr7,chr7,chr7,chr7	-,-,+,-	HOXA3,HOXA3,HOXA11-AS1,HOXA4	-5269,978,59315,4738
chr12:62857660-62859094	chr12	+	62857767	62858799	True	NM_175895,NM_015026	chr12,chr12	-,+	C12orf61,MON2	138477,1797
chrX:30669337-30670654	chrX	+	30669578	30670680	True	NM_203391,NM_000167,NM_001205019,NM_025159,NM_001128127	chrX,chrX,chrX,chrX,chrX	+,+,+,-,+	GK,GK,GK,CXorf21,GK	795,795,795,-73545,795
chr6:139454653-139455817	chr6	+	139454803	139455441	True	NM_016217,NM_031922	chr6,chr6	+,-	HECA,REPS1	807,-145405
chr16:58005532-58006269	chr16	+	58005563	58006180	True	NM_001297,NM_199456,NM_199046,NM_001135639	chr16,chr16,chr16,chr16	-,+,+,-	CNGB1,TEPP,TEPP,CNGB1	-543,4158,4158,-543
chr14:95079732-95080539	chr14	+	95079824	95080584	True	NM_001085,NM_173850	chr14,chr14	+,-	SERPINA3,SERPINA12	-1161,-95643
chr9:115656188-115656892	chr9	+	115656486	115656646	True	NM_001012994,NM_033051	chr9,chr9	+,-	SNX30,SLC46A2	-143408,-3293
chr6:41039110-41039706	chr6	+	41039138	41039744	True	NM_021705,NM_145063,NM_002505	chr6,chr6,chr6	+,-,+	NFYA,C6orf130,NFYA	962,494,962
chr12:53211119-53212604	chr12	+	53211156	53212170	True	NM_199187,NM_002272	chr12,chr12	+,-	KRT18,KRT4	130484,-2821
chr9:137220162-137220364	chr9	+	137220166	137220378	True	NM_002957,NR_023344	chr9,chr9	+,-	RXRA,RNU6ATAC	-1901,-190480
chr16:30961356-30962282	chr16	+	30961664	30962208	True	NM_014712,NM_152288,NR_024348	chr16,chr16,chr16	+,+,-	SETD1A,ORAI3,FBXL19-AS1	6406,-1310,-27074
chr1:182413066-182414939	chr1	+	182413238	182414461	True	NM_172000,NM_001137669	chr1,chr1	-,+	TEDDM1,RGSL1	-43487,4794
chr1:154349296-154350230	chr1	+	154349739	154350039	True	NM_001010846,NM_000565	chr1,chr1	-,+	SHE,IL6R	124537,27629
chr14:102023032-102023757	chr14	+	102023320	102023717	True	NR_002770,NR_031649,NM_001362	chr14,chr14,chr14	-,-,+	DIO3OS,MIR1247,DIO3	-1307,3092,3970
chr17:18953922-18955114	chr17	+	18953921	18955156	True	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	75625,-3585
chr17:18953922-18955114	chr17	-	19026011	19027247	False	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	3534,-75675
chr20:57764725-57766276	chr20	+	57764959	57766089	True	NR_037930,NM_178457	chr20,chr20	-,+	SLMO2-ATP5E,ZNF831	-147058,-15
chr3:125093118-125093404	chr3	+	125093166	125093278	True	NM_021964,NR_024250	chr3,chr3	-,+	ZNF148,LOC100125556	970,542165
chr17:77033504-77034365	chr17	+	77033662	77034413	True	NM_138793,NM_198593	chr17,chr17	-,+	CANT1,C1QTNF1	-27763,-3249
chr17:46672376-46673602	chr17	+	46672525	46673471	True	NR_033204,NR_033205,NR_033202,NR_033203,NR_033201,NM_018952,NM_002147	chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,-,-	LOC404266,LOC404266,LOC404266,LOC404266,LOC404266,HOXB6,HOXB5	-2894,2,-4734,-2922,-4753,8913,-1422
chr7:26329576-26329943	chr7	+	26329708	26329846	True	NM_031243,NM_013322,NM_001199835,NR_037670	chr7,chr7,chr7,chr7	-,+,+,+	HNRNPA2B1,SNX10,SNX10,SNX10	-89295,1668,1668,1668
chr3:28390525-28390793	chr3	+	28390590	28390842	True	NM_022461,NM_001040432,NM_001134432,NM_001134433	chr3,chr3,chr3,chr3	-,+,-,-	AZI2,ZCWPW2,AZI2,AZI2	28,41144,28,28
chr19:14381699-14382534	chr19	+	14381900	14382034	True	NM_014921,NM_001025160	chr19,chr19	-,+	LPHN1,CD97	-64903,110178
chr1:158735505-158735774	chr1	+	158735531	158735821	True	NM_001005185,NM_001005184	chr1,chr1	-,+	OR6N1,OR6K6	701,-10976
chr7:94284655-94285131	chr7	+	94284659	94284776	True	NM_003919,NM_001099401,NM_001099400,NM_001184961,NM_015068,NM_001172438,NM_001184962,NM_001172437,NM_001040152	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,+,+,+,+,+,+	SGCE,SGCE,SGCE,PEG10,PEG10,PEG10,PEG10,PEG10,PEG10	796,796,796,860,860,905,860,905,860
chr12:11091147-11093007	chr12	+	11091149	11092710	True	NM_001110213,NM_023922,NM_005042	chr12,chr12,chr12	+,-,+	PRH2,TAS2R14,PRH2	-9366,31,-9367
chr19:36606761-36608005	chr19	+	36606986	36608035	True	NM_006233,NM_001281	chr19,chr19	-,+	POLR2I,TBCB	-780,-1149
chr8:21917100-21918003	chr8	+	21917175	21918054	True	NM_001978,NM_024815,NM_001114135,NM_001114137,NM_001114136,NM_001114139,NM_001114138	chr8,chr8,chr8,chr8,chr8,chr8,chr8	+,-,+,+,+,+,+	EPB49,NUDT18,EPB49,EPB49,EPB49,EPB49,EPB49	-549,48933,-1859,-6154,-4907,-4907,-549
chr7:87518685-87519702	chr7	+	87518911	87519557	True	NM_006716,NM_018843	chr7,chr7	+,-	DBF4,SLC25A40	-13427,-13219
chr2:10263532-10264526	chr2	+	10263760	10264222	True	NM_001034,NM_001165931,NM_001037160	chr2,chr2,chr2	+,+,-	RRM2,RRM2,CYS1	-948,-1116,-43222
chr5:178016223-178016570	chr5	+	178016473	178016555	True	NM_173465,NM_058230	chr5,chr5	-,+	COL23A1,ZNF354B	1051,270398
chr20:31460161-31460617	chr20	+	31460257	31460323	True	NM_012325,NM_053041	chr20,chr20	+,-	MAPRE1,COMMD7	-52609,-128443
chr3:36422102-36422385	chr3	+	36422101	36422427	True	NM_003149,NM_033403	chr3,chr3	+,-	STAC,DCLK3	-55,358975
chr12:133259393-133259983	chr12	+	133259583	133259833	True	NM_018663,NM_006231	chr12,chr12	+,-	PXMP2,POLE	4358,4162
chr22:18893612-18893862	chr22	+	18893618	18893898	True	NM_001195226,NM_005675	chr22,chr22	-,+	PRODH,DGCR6	30116,57
chrX:106451479-106451858	chrX	+	106451682	106451755	True	NM_001169154,NM_017681,NM_173494,NR_033676	chrX,chrX,chrX,chrX	+,-,+,-	CXorf41,NUP62CL,CXorf41,NUP62CL	-1877,-2012,-1877,-2012
chr14:74894993-74895424	chr14	+	74895029	74895391	True	NM_001105579,NM_194279	chr14,chr14	-,+	TMEM90A,ISCA2	-2224,65058
chr19:409467-409817	chr19	+	409470	409810	True	NM_001136263,NM_130760	chr19,chr19	-,+	C2CD4C,MADCAM1	-300,86679
chr2:232455734-232456425	chr2	+	232455997	232456325	True	NM_006056,NM_152614	chr2,chr2	-,+	NMUR1,C2orf57	-60815,1249
chr13:21475236-21476272	chr13	+	21475310	21476227	True	NM_022459,NM_138284	chr13,chr13	-,+	XPO4,IL17D	736,-197888
chr10:89293063-89294113	chr10	+	89293199	89294166	True	NM_001178118,NR_024397	chr10,chr10	+,-	MINPP1,LOC728190	-25675,-190884
chr12:56390075-56390681	chr12	+	56390119	56390680	True	NM_006928,NM_000456,NM_001032386,NM_001032387	chr12,chr12,chr12,chr12	-,+,+,+	PMEL,SUOX,SUOX,SUOX	-29623,362,362,362
chr16:2827736-2828810	chr16	+	2827857	2828557	True	NM_152891,NM_001135086,NM_007108,NM_207013	chr16,chr16,chr16,chr16	-,+,-,-	PRSS33,PRSS41,TCEB2,TCEB2	8201,19928,-560,-560
chr2:175201371-175201596	chr2	+	175201480	175201640	True	NM_001145250,NM_004882	chr2,chr2	+,-	SP9,CIR1	-1710,58853
chr22:18782008-18783853	chr22	+	18782184	18783438	True	NM_005675,NR_003267	chr22,chr22	+,-	DGCR6,GGT3P	110297,-2710
chr22:18782008-18783853	chr22	+	21583307	21584559	False	NR_024583,NR_002829	chr22,chr22	+,-	POM121L8P,P2RX6P	52154,-184769
chr16:10837688-10837912	chr16	+	10837693	10837957	True	NM_002484,NM_144674	chr16,chr16	+,-	NUBP1,TEKT5	-46,-48891
chr8:90979894-90980954	chr8	+	90979977	90980944	True	NM_002485,NM_001359	chr8,chr8	-,+	NBN,DECR1	16012,32635
chr19:49403328-49403580	chr19	+	49403368	49403614	True	NM_003323,NM_006184	chr19,chr19	-,+	TULP2,NUCB1	-1372,-112
chr1:40724101-40724550	chr1	+	40724107	40724484	True	NM_005857,NM_001852	chr1,chr1	+,-	ZMPSTE24,COL9A2	-425,58512
chr6:43149336-43149759	chr6	+	43149340	43149642	True	NM_006443,NM_015089	chr6,chr6	-,+	C6orf108,CUL9	47619,279
chr1:161147580-161148599	chr1	+	161147683	161148282	True	NM_001122764,NM_001199874,NM_001199873,NM_003779	chr1,chr1,chr1,chr1	+,-,-,-	PPOX,B4GALT3,B4GALT3,B4GALT3	-11553,69,69,69
chr19:41620407-41620968	chr19	+	41620507	41621017	True	NM_030589,NM_000774	chr19,chr19	-,+	CYP2A7,CYP2F1	-231850,-205
chr11:47371834-47372094	chr11	+	47371967	47372029	True	NM_000256,NM_001128225	chr11,chr11	-,+	MYBPC3,SLC39A13	2274,58016
chr1:231762987-231763285	chr1	+	231763219	231763333	True	NM_001164537,NM_018662,NM_001164538,NM_001164539,NM_001012957,NM_001012958,NM_001012959,NR_034037,NM_001164549,NM_001164548,NM_001164542,NM_001164541,NM_001164540,NM_001164547,NM_001164546,NM_001164545,NM_001164544,NM_001164550,NM_001164551,NM_001164552,NM_001164553,NM_001164554,NM_001164555,NM_001164556	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,+,+,-,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+	DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,LOC100287814,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1	-709,-709,-709,-709,-709,-709,-709,-15383,-709,-709,-709,-709,-709,-709,-709,-709,-709,-709,-709,-709,-709,-709,-709,-709
chr3:57543124-57544308	chr3	+	57543252	57544054	True	NM_178504,NM_177966	chr3,chr3	-,+	DNAH12,PDE12	-13181,-1322
chr1:212612117-212612806	chr1	+	212612249	212612567	True	NR_026598,NM_013349,NM_018252	chr1,chr1,chr1	+,+,-	NENF,NENF,TMEM206	-6071,-6071,-23982
chr19:50633199-50633914	chr19	+	50633715	50633779	True	NR_024223,NR_024224,NR_024225,NR_024226,NR_024227,NR_024228,NR_024229,NM_001145809,NR_024215,NR_024214,NR_024231,NR_024230,NR_024242,NR_024243	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,+,-,-,-,-,-,-	SNAR-A5,SNAR-A7,SNAR-A11,SNAR-A9,SNAR-A6,SNAR-A8,SNAR-A10,MYH14,SNAR-A4,SNAR-A3,SNAR-B1,SNAR-B2,SNAR-A14,SNAR-D	-1936,-1936,-1936,-1936,-1936,-1936,-1936,73105,-1936,-1936,3392,3392,-1936,9848
chr19:50633199-50633914	chr19	+	50597791	50597853	False	NR_024223,NR_024224,NR_024225,NR_024226,NR_024227,NR_024228,NR_024229,NR_027257,NR_024215,NR_024214,NR_024242	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,+,-,-,-	SNAR-A5,SNAR-A7,SNAR-A11,SNAR-A9,SNAR-A6,SNAR-A8,SNAR-A10,FLJ26850,SNAR-A4,SNAR-A3,SNAR-A14	-1925,-1925,-1925,-1925,-1925,-1925,-1925,-43906,-1925,-1925,-1925
chr19:50633199-50633914	chr19	+	50628380	50628444	False	NR_024223,NR_024224,NR_024225,NR_024226,NR_024227,NR_024228,NR_024229,NR_027257,NR_024215,NR_024214,NR_024231,NR_024230,NR_024242	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,+,-,-,-,-,-	SNAR-A5,SNAR-A7,SNAR-A11,SNAR-A9,SNAR-A6,SNAR-A8,SNAR-A10,FLJ26850,SNAR-A4,SNAR-A3,SNAR-B1,SNAR-B2,SNAR-A14	-1929,-1929,-1929,-1929,-1929,-1929,-1929,-74494,-1929,-1929,8727,8727,-1929
chr19:43529982-43530636	chr19	+	43530521	43530677	True	NM_203287,NM_002785,NR_036584,NM_001113410	chr19,chr19,chr19,chr19	-,-,+,-	PSG11,PSG11,LOC100289650,PSG11	4,4,-204557,4
chr1:223896098-223896395	chr1	+	223896136	223896199	True	NM_001143962,NM_001146068,NM_001748	chr1,chr1,chr1	-,+,+	CAPN8,CAPN2,CAPN2	-42700,-6897,3919
chrX:153664094-153664767	chrX	+	153664153	153664696	True	NM_001009934,NM_004699,NM_001493,NM_001183	chrX,chrX,chrX,chrX	-,+,+,+	DNASE1L1,FAM50A,GDI1,ATP6AP1	-23726,7788,562,-7226
chr1:27226300-27226527	chr1	+	27226319	27226553	True	NM_018066,NM_022078,NM_006600	chr1,chr1,chr1	-,-,+	GPN2,GPATCH3,NUDC	-9450,459,21670
chr19:18747112-18747408	chr19	+	18747258	18747444	True	NM_004750,NM_018316	chr19,chr19	-,+	CRLF1,KLHL26	-29598,393
chr16:25123048-25123343	chr16	+	25123062	25123304	True	NM_018054,NM_001032391,NM_016309	chr16,chr16,chr16	-,+,+	ARHGAP17,LCMT1,LCMT1	-96387,-66,-66
chr4:107955349-107955810	chr4	+	107955389	107955850	True	NM_014421,NM_001142416	chr4,chr4	-,+	DKK2,AIMP1	1654,-717776
chr19:43894910-43895796	chr19	+	43895287	43895811	True	NM_031451,NM_014400	chr19,chr19	+,-	TEX101,LYPD3	-2575,74070
chr13:54915311-54916606	chr13	+	54915350	54916218	True	NR_031628,NM_006418	chr13,chr13	-,+	MIR1297,OLFM4	-29167,-1312525
chr2:166043084-166044159	chr2	+	166043160	166044209	True	NM_001040142,NM_001081676	chr2,chr2	+,-	SCN2A,SCN3A	51702,16425
chr11:67476827-67478023	chr11	+	67476969	67477541	True	NM_007103,NM_001031615	chr11,chr11	+,-	NDUFV1,ALDH3B2	-102697,-28284
chr6:71274398-71275740	chr6	+	71274410	71275576	True	NM_145267,NM_001851	chr6,chr6	+,-	C6orf57,COL9A1	1048,-261624
chrX:14545709-14546947	chrX	+	14545937	14546929	True	NM_002063,NM_001171942,NM_001118885,NM_001018113,NM_001118886	chrX,chrX,chrX,chrX,chrX	+,+,+,-,+	GLRA2,GLRA2,GLRA2,FANCB,GLRA2	490,490,490,344306,490
chr22:30162200-30162610	chr22	+	30162202	30162608	True	NM_001003692,NM_019103,NM_001003684,NM_013387	chr22,chr22,chr22,chr22	-,-,+,+	ZMAT5,ZMAT5,UQCR10,UQCR10	411,411,749,749
chr13:25163097-25164266	chr13	+	25163183	25164049	True	NM_006437,NR_002815	chr13,chr13	-,+	PARP4,LOC374491	-76235,-8898
chr21:43434379-43435575	chr21	+	43434450	43435532	True	NR_027273,NM_020727,NM_001098402,NM_001098403	chr21,chr21,chr21,chr21	+,-,-,-	C21orf121,ZNF295,ZNF295,ZNF295	6580,-3954,-3954,-3954
chr18:44530940-44531824	chr18	+	44530973	44531724	True	NM_001100817,NM_031303	chr18,chr18	-,+	TCEB3CL,KATNAL2	12697,-4248
chr7:97620888-97621700	chr7	+	97620904	97621623	True	NM_006188,NM_014916	chr7,chr7	-,+	OCM2,LMTK2	-1488,114573
chr16:31276612-31276835	chr16	+	31276760	31276830	True	NM_001145808,NM_000632,NM_152901	chr16,chr16,chr16	+,+,-	ITGAM,ITGAM,PYDC1	-5523,-5523,-48365
chr10:135152613-135154103	chr10	+	135153041	135154001	True	NM_001145201,NM_015722,NM_145202	chr10,chr10,chr10	+,-,+	PRAP1,CALY,PRAP1	6842,-2566,6842
chr2:11474122-11474559	chr2	+	11474152	11474350	True	NM_152391,NM_004850	chr2,chr2	+,-	PQLC3,ROCK2	-178674,10419
chr12:62704307-62705312	chr12	+	62704830	62705299	True	NM_006313,NM_178539	chr12,chr12	+,-	USP15,FAM19A2	-50700,-118279
chr5:138839879-138841301	chr5	+	138840117	138841327	True	NM_003339,NM_001077693	chr5,chr5	+,-	UBE2D2,ECSCR	99423,1043
chr14:105332695-105333204	chr14	+	105332920	105333122	True	NM_015005,NM_001112726,NM_001014432	chr14,chr14,chr14	+,+,-	KIAA0284,KIAA0284,AKT1	-1321,-1321,-70840
chr1:151882820-151884511	chr1	+	151882845	151884147	True	NR_024237,NM_053055	chr1,chr1	+,-	LOC100132111,THEM4	-71951,-484
chr1:24124625-24125300	chr1	+	24124629	24125187	True	NM_001008216,NM_000403,NM_007260,NM_001127621	chr1,chr1,chr1,chr1	-,-,+,-	GALE,GALE,LYPLA2,GALE	2157,1897,-7034,923
chr17:38170470-38170969	chr17	+	38170622	38171002	True	NM_001079518,NM_000759,NR_033662,NM_172220,NM_172219,NM_001178147	chr17,chr17,chr17,chr17,chr17,chr17	-,+,+,+,+,+	MED24,CSF3,CSF3,CSF3,CSF3,CSF3	39937,611,611,611,611,611
chr11:66336320-66337109	chr11	+	66336633	66336953	True	NM_003793,NM_001104	chr11,chr11	-,+	CTSF,ACTN3	-586,-22300
chr4:48989143-48989453	chr4	+	48989189	48989469	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-975,-80374
chr1:120901464-120901685	chr1	+	120901625	120901705	True	NR_027337,NM_001004340	chr1,chr1	+,-	HIST2H2BA,FCGR1B	4328,34289
chr1:120901464-120901685	chr1	-	149788230	149788284	False	NM_001024599,NM_001161334,NM_001123375,NM_001034077	chr1,chr1,chr1,chr1	-,-,-,+	HIST2H2BF,HIST2H2BF,HIST2H3D,HIST2H4B	-4302,-4302,-2994,15936
chr1:120901464-120901685	chr1	-	149403507	149403587	False	NR_027484,NM_001024599	chr1,chr1	+,-	FCGR1C,HIST2H2BF	-34264,-4278
chr1:109619544-109619764	chr1	+	109619573	109619740	True	NM_020141,NM_005645	chr1,chr1	+,-	TMEM167B,TAF13	13662,-949
chr1:100519576-100520064	chr1	+	100520052	100520112	True	NM_033055,NM_194292	chr1,chr1	+,-	HIAT1,SASS6	-16314,78449
chr20:30308678-30309625	chr20	+	30308762	30309670	True	NM_012112,NM_138578,NM_001191	chr20,chr20,chr20	+,-,-	TPX2,BCL2L1,BCL2L1	17233,1036,1036
chrX:13061752-13062062	chrX	+	13061858	13062057	True	NM_021109,NM_174901	chrX,chrX	+,-	TMSB4X,FAM9C	-68683,911
chr5:115297614-115297955	chr5	+	115297665	115297979	True	NR_033363,NM_173800	chr5,chr5	-,+	ATG12,AQPEP	-120117,171
chr2:750811-752318	chr2	+	750854	752166	True	NM_018968,NM_152834	chr2,chr2	+,-	SNTG2,TMEM18	194387,-73415
chr10:11207219-11207429	chr10	+	11207269	11207477	True	NM_001083591,NR_024411,NM_001025076	chr10,chr10,chr10	+,-,+	CELF2,LOC254312,CELF2	-334,-213143,-334
chr4:107236288-107237244	chr4	+	107236311	107237229	True	NM_004757,NM_001142415,NM_001142416,NM_033115,NM_001163436,NM_001163437,NM_001163435	chr4,chr4,chr4,chr4,chr4,chr4,chr4	+,+,+,-,-,-,-	AIMP1,AIMP1,AIMP1,TBCK,TBCK,TBCK,TBCK	-49,-7,434,244,682,244,244
chr5:79612900-79613540	chr5	+	79613105	79613267	True	NM_032567,NR_004845	chr5,chr5	+,-	SPZ1,LOC644936	2522,-16808
chr11:790847-791584	chr11	+	790886	791516	True	NM_001004,NM_001191060,NM_024698,NM_001191061,NM_016564	chr11,chr11,chr11,chr11,chr11	+,-,-,-,-	RPLP2,SLC25A22,SLC25A22,SLC25A22,CEND1	18419,6529,4797,6803,-760
chr14:34932547-34933542	chr14	+	34932910	34933308	True	NR_002937,NM_138288	chr14,chr14	+,-	C14orf19,C14orf147	475819,-1442
chr6:1311383-1311982	chr6	+	1311555	1311859	True	NM_033260,NR_027116	chr6,chr6	+,-	FOXQ1,LOC285768	815,-209988
chr5:43121973-43122247	chr5	+	43122083	43122273	True	NM_003432,NR_034127	chr5,chr5	+,-	ZNF131,LOC100132356	-492,-55010
chr5:10602305-10602736	chr5	+	10602321	10602779	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-37937,158658
chr19:54137055-54137363	chr19	+	54137240	54137412	True	NM_001012728,NR_002938	chr19,chr19	+,-	DPRX,LOC284379	-1985,-30489
chr1:180126851-180127204	chr1	+	180126874	180127218	True	NM_001004128,NR_037642,NM_002826	chr1,chr1,chr1	+,-,+	QSOX1,LOC100527964,QSOX1	-2968,116648,-2968
chr17:38520197-38520866	chr17	+	38520200	38520688	True	NM_001024809,NM_152219	chr17,chr17	+,-	RARA,GJD3	-21980,307
chrX:48660879-48661109	chrX	+	48660927	48661155	True	NM_006044,NM_013271	chrX,chrX	+,-	HDAC6,PCSK1N	-492,32855
chr18:903828-904250	chr18	+	903839	904275	True	NM_001117,NM_001099733,NM_005433	chr18,chr18,chr18	+,+,-	ADCYAP1,ADCYAP1,YES1	1021,668,-91512
chr2:62727885-62728400	chr2	+	62727915	62728449	True	NM_198276,NM_001142615	chr2,chr2	-,+	TMEM17,EHBP1	5205,172536
chr17:72971404-72971644	chr17	+	72971603	72971663	True	NM_014603,NM_030630	chr17,chr17	+,-	CDR2L,C17orf28	12063,-2703
chr17:47209214-47209949	chr17	+	47209507	47209967	True	NM_001159388,NM_031498,NM_153446,NM_001159387	chr17,chr17,chr17,chr17	+,-,+,+	B4GALNT2,GNGT2,B4GALNT2,B4GALNT2	-74,76826,361,163
chr7:6653267-6653904	chr7	+	6653280	6653744	True	NM_017560,NM_001145118	chr7,chr7	+,-	ZNF853,GRID2IP	1782,-62213
chr1:41000206-41001785	chr1	+	41000577	41001681	True	NM_152373,NM_014747	chr1,chr1	+,-	ZNF684,RIMS3	-3395,129694
chrX:55026519-55027260	chrX	+	55026545	55027230	True	NM_002625,NM_014481	chrX,chrX	-,+	PFKFB1,APEX2	-6034,18
chr15:68116932-68117152	chr15	+	68117083	68117185	True	NM_001031807,NM_001031733	chr15,chr15	+,-	SKOR1,CALML4	755,381313
chr11:76750563-76750791	chr11	+	76750591	76750783	True	NM_182833,NM_138706	chr11,chr11	-,+	GDPD4,B3GNT6	247730,-5207
chrX:72347357-72347686	chrX	+	72347414	72347730	True	NR_027291,NM_001042506	chrX,chrX	-,+	NAP1L6,PABPC1L2B	239,-124113
chr16:21311207-21312089	chr16	+	21311239	21312105	True	NM_001888,NM_001014444,NR_026675	chr16,chr16,chr16	-,-,+	CRYM,CRYM,NCRNA00169	2349,2349,64
chr18:14518053-14519435	chr18	+	14518261	14519220	True	NR_024076,NR_026756	chr18,chr18	-,+	CXADRP3,LOC284233	-19556,-180898
chr18:14518053-14519435	chr21	-	15006565	15007396	False	NR_026755,NM_174981	chr21,chr21	-,+	C21orf15,POTED	213347,-24118
chr1:41249271-41249477	chr1	+	41249289	41249526	True	NM_004700,NM_172163,NM_133467	chr1,chr1,chr1	+,+,-	KCNQ4,KCNQ4,CITED4	157,157,78542
chr1:152658788-152659564	chr1	+	152658989	152659089	True	NM_178431,NM_014357	chr1,chr1	-,+	LCE3A,LCE2B	-63410,-441
chr11:17190717-17191233	chr11	+	17190755	17191271	True	NM_002645,NM_005013	chr11,chr11	-,+	PIK3C2A,NUCB2	133,107014
chr18:29520753-29521125	chr18	+	29520836	29520961	True	NM_014939,NM_017831	chr18,chr18	-,+	TRAPPC8,RNF125	2187,77483
chr13:91582599-91584351	chr13	+	91582754	91584288	True	NR_027039,NR_027349	chr13,chr13	-,+	LOC144776,MIR17HG	-3903,415785
chr14:50992271-50993108	chr14	+	50992581	50993018	True	NM_001127713,NM_006575,NM_198794	chr14,chr14,chr14	+,-,-	ATL1,MAP4K5,MAP4K5	6781,6421,6421
chr15:25494472-25494817	chr15	+	25494703	25494765	True	NR_003353,NR_003358,NM_130838,NR_003344,NR_003351,NR_003357,NR_003356,NR_003355,NR_003354,NR_003302,NR_003303,NR_003359	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,-,+,+,+,+,+,+,+,+,+	SNORD115-38,SNORD115-43,UBE3A,SNORD115-29,SNORD115-36,SNORD115-42,SNORD115-41,SNORD115-40,SNORD115-39,SNORD115-10,SNORD115-11,SNORD115-44	-9769,-409,155938,-409,-409,-2262,-4129,-5993,-7861,-2262,-409,1240
chrX:47049454-47049984	chrX	+	47049456	47050020	True	NM_003334,NM_153280,NR_024235	chrX,chrX,chrX	+,+,-	UBA1,UBA1,NDUFB11	3180,178,-44847
chr1:1179468-1179694	chr1	+	1179552	1179632	True	NM_080605,NM_001014980	chr1,chr1	+,-	B3GALT6,FAM132A	-11974,2520
chr20:23016235-23016590	chr20	+	23016306	23016554	True	NM_001052,NM_000361	chr20,chr20	+,-	SSTR4,THBD	-300,13797
chr7:16432205-16433403	chr7	+	16432222	16433083	True	NM_001195280,NM_001101417	chr7,chr7	+,-	LOC100506049,ISPD	133421,27915
chr6:27105784-27107000	chr6	+	27105944	27107042	True	NM_021064,NM_003495,NM_080593,NM_080596,NM_021058,NR_036096	chr6,chr6,chr6,chr6,chr6,chr6	+,+,-,+,-,+	HIST1H2AG,HIST1H4I,HIST1H2BK,HIST1H2AH,HIST1H2BJ,MIR3143	-5185,45,7645,7865,-5369,8362
chr9:127629712-127630179	chr9	+	127629722	127630060	True	NM_007209,NM_030978	chr9,chr9	-,+	RPL35,ARPC5L	-5482,1423
chr12:133403425-133403945	chr12	+	133403513	133403859	True	NM_001172557,NM_005895,NM_001170544	chr12,chr12,chr12	-,-,+	GOLGA3,GOLGA3,PGAM5	1617,1479,-116171
chr5:39359009-39359613	chr5	+	39359222	39359646	True	NM_001737,NM_003999	chr5,chr5	-,+	C9,OSMR	5059,-513180
chr7:8474546-8474887	chr7	+	8474568	8474906	True	NM_004968,NM_152745	chr7,chr7	-,+	ICA1,NXPH1	-172383,-1035
chr9:126021910-126022274	chr9	+	126022015	126022303	True	NM_173689,NM_001171137,NM_018387,NR_033234	chr9,chr9,chr9,chr9	+,-,-,-	CRB2,STRBP,STRBP,STRBP	96144,8608,8596,8596
chr10:85954527-85954768	chr10	+	85954590	85954738	True	NM_033100,NM_001171971,NM_001017924	chr10,chr10,chr10	+,+,-	CDHR1,CDHR1,LRIT2	-229,-229,30596
chr1:235811147-235811646	chr1	+	235811205	235811678	True	NM_003193,NM_001098722,NM_001098721,NM_004485	chr1,chr1,chr1,chr1	+,-,-,-	TBCE,GNG4,GNG4,GNG4	-280537,1667,2428,2428
chr9:140335757-140336030	chr9	+	140335760	140335826	True	NM_001033113,NM_006647,NM_198585	chr9,chr9,chr9	-,+,-	ENTPD8,NOXA1,ENTPD8	125,-17964,125
chr11:75109659-75110808	chr11	+	75109742	75110780	True	NM_001005,NM_001039548,NR_000005,NR_000025	chr11,chr11,chr11,chr11	+,-,+,+	RPS3,KLHL35,SNORD15A,SNORD15B	-5,30944,654,4684
chr11:121233443-121233741	chr6	+	129479566	129480449	False	NM_033515,NM_001079823	chr6,chr6	-,+	ARHGAP18,LAMA2	551659,-275331
chr11:121233443-121233741	chr11	+	121233457	121233708	True	NR_029671,NM_001024956	chr11,chr11	-,+	MIR125B1,SC5DL	736901,-69931
chr11:121233443-121233741	chr10	-	88598705	88672025	False	NM_003087,NM_024756	chr10,chr10	+,-	SNCG,MMRN2	46262,118717
chr5:140222592-140222970	chr5	+	140222692	140223012	True	NM_014005,NM_002109,NM_031856,NM_031857,NM_018910,NM_018911,NM_031852	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,-,+,+,+,+,+	PCDHA9,HARS,PCDHA8,PCDHA9,PCDHA7,PCDHA8,PCDHA7	4344,-151721,-1836,4344,-8774,-1836,-8774
chr12:109252606-109253536	chr12	+	109252679	109253087	True	NM_001917,NM_001161330,NM_018984	chr12,chr12,chr12	+,-,-	DAO,SSH1,SSH1	20769,-1320,-1320
chr19:10565079-10565556	chr19	+	10565122	10565592	True	NM_006202,NM_012289	chr19,chr19	+,-	PDE4A,KEAP1	-1540,47939
chr5:148757981-148758474	chr5	+	148758070	148758398	True	NM_024028,NM_014443	chr5,chr5	+,-	PCYOX1L,IL17B	-20551,490
chr22:51217741-51218131	chr22	+	51217809	51218131	True	NM_001003789,NM_001130919,NM_001130920,NM_001130921,NM_001130922,NM_001130923	chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,-,-	RABL2B,RABL2B,RABL2B,RABL2B,RABL2B,RABL2B	4006,4006,4006,4006,4006,4006
chr22:51217741-51218131	chr2	-	114388769	114389091	False	NM_007082,NR_000029,NM_013412,NR_024529,NR_024528,NR_024530,NR_024531	chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,-,+,-,-,-,-	RABL2A,RPL23AP7,RABL2A,RPL23AP7,RPL23AP7,RPL23AP7,RPL23AP7	-4003,-4054,-4003,-4054,-4054,-4054,-4054
chr7:32526461-32528456	chr7	+	32526731	32528154	True	NM_015060,NM_001130710,NR_024466,NM_001139499,NM_012322	chr7,chr7,chr7,chr7,chr7	+,-,-,-,-	AVL9,LSM5,LSM5,LSM5,LSM5	7021,6769,2374,6769,1922
chr18:39540865-39542542	chr18	+	39541024	39542586	True	NM_002647,NR_002838	chr18,chr18	+,-	PIK3C3,KC6	-5884,-440463
chr7:53103999-53104279	chr7	+	53104024	53104328	True	NM_182595,NR_004422	chr7,chr7	+,-	POM121L12,HPVC1	-726,1165836
chr20:56883471-56883791	chr20	+	56883533	56883829	True	NR_003505,NM_020673	chr20,chr20	-,+	PPP4R1L,RAB22A	716,941
chr10:27525671-27526965	chr10	+	27525851	27526555	True	NM_032844,NR_024150,NM_145698,NM_001042473	chr10,chr10,chr10,chr10	+,-,-,-	MASTL,ACBD5,ACBD5,ACBD5	-82157,4571,3311,4571
chr3:64672127-64672361	chr3	+	64672145	64672359	True	NM_182920,NR_030317	chr3,chr3	-,+	ADAMTS9,MIR548A2	1056,33323
chr14:31090614-31090964	chr14	+	31090854	31090998	True	NM_016106,NR_030354,NM_182835	chr14,chr14,chr14	+,-,+	SCFD1,MIR624,SCFD1	522,393000,522
chr9:130161232-130162217	chr9	+	130161400	130162209	True	NM_014580,NR_002449	chr9,chr9	+,-	SLC2A8,SNORA65	-1986,48757
chr11:65769144-65769349	chr11	+	65769148	65769332	True	NM_003860,NM_001143985,NM_032325	chr11,chr11,chr11	+,+,-	BANF1,BANF1,EIF1AD	217,217,296
chr11:208008-208213	chr11	+	208012	208250	True	NM_016526,NM_001098787,NM_021932	chr11,chr11,chr11	-,-,+	BET1L,BET1L,RIC8A	-590,-590,279
chr18:12949159-12949542	chr18	+	12949197	12949345	True	NM_031216,NM_001013437,NM_002828	chr18,chr18,chr18	+,+,-	SEH1L,SEH1L,PTPN2	-1265,-1265,-64863
chr17:80374034-80375349	chr17	+	80374169	80375081	True	NM_173620,NM_175902,NR_033265,NM_024648	chr17,chr17,chr17,chr17	+,-,-,-	HEXDC,C17orf101,C17orf101,C17orf101	1170,1491,1491,1491
chr2:99772265-99772817	chr2	+	99772310	99772634	True	NR_037935,NR_037936,NM_015929,NM_025244,NM_145197,NM_145196,NM_145199,NM_145198,NM_001204830	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,-,+,+,+,+,+	LIPT1,LIPT1,LIPT1,TSGA10,LIPT1,LIPT1,LIPT1,LIPT1,LIPT1	-824,-943,-943,-1123,-943,-943,-943,-943,-824
chr12:30908370-30909214	chr12	+	30908405	30909174	True	NM_023925,NM_001002259,NM_032156,NM_001080509	chr12,chr12,chr12,chr12	-,-,-,+	CAPRIN2,CAPRIN2,CAPRIN2,TSPAN11	-957,-957,-957,170663
chr2:89071961-89072492	chr2	+	89071961	89072516	True	NM_004836,NR_015424	chr2,chr2	-,+	EIF2AK3,ANKRD36BP2	-144867,-6605
chr2:89071961-89072492	chr2	+	97829891	97830009	False	NM_199336,NM_001164315	chr2,chr2	-,+	FAHD2B,ANKRD36	-69309,-50709
chr2:89071961-89072492	chr2	-	96604773	96604891	False	NM_207328,NR_003698	chr2,chr2	-,+	GPAT2,LOC729234	95886,71407
chrX:100074692-100075231	chrX	+	100074748	100075270	True	NM_001325,NM_007052	chrX,chrX	+,-	CSTF2,NOX1	77,54114
chr16:30995325-30995625	chr16	+	30995549	30995617	True	NM_001142778,NM_025193,NM_052874,NM_001142777	chr16,chr16,chr16,chr16	+,+,-,+	HSD3B7,HSD3B7,STX1B,HSD3B7	901,901,26262,901
chr12:50306841-50307617	chr12	+	50306890	50307652	True	NM_000486,NM_012306,NR_026948	chr12,chr12,chr12	+,-,-	AQP2,FAIM2,LOC283332	36871,-9130,-1244
chr10:23478843-23479598	chr10	+	23479207	23479625	True	NM_153714,NM_178161	chr10,chr10	-,+	C10orf67,PTF1A	154197,1834
chr1:212591075-212592560	chr1	+	212591332	212592412	True	NM_018252,NM_001198862,NM_013349	chr1,chr1,chr1	-,-,+	TMEM206,TMEM206,NENF	-3065,-3089,13816
chr15:65280294-65281174	chr15	+	65280610	65281045	True	NM_001127890,NM_178859,NM_001127889,NM_016630	chr15,chr15,chr15,chr15	-,+,-,-	SPG21,OSTBETA,SPG21,SPG21	1257,56662,818,1257
chr4:57371882-57372488	chr4	+	57372061	57372481	True	NM_002703,NM_206919	chr4,chr4	-,+	PPAT,ARL9	-70259,-737
chr8:93001244-93003044	chr8	+	93001398	93002759	True	NM_175636,NM_052832	chr8,chr8	-,+	RUNX1T1,SLC26A7	27207,-739943
chr22:45096968-45097396	chr22	+	45097200	45097393	True	NM_181333,NM_181334,NM_032287	chr22,chr22,chr22	+,+,-	PRR5,PRR5-ARHGAP8,LDOC1L	684,988,-203195
chr9:23824648-23825019	chr9	+	23824676	23825068	True	NM_022160,NM_004432,NM_001171197,NM_001171195	chr9,chr9,chr9,chr9	+,-,-,-	DMRTA1,ELAVL2,ELAVL2,ELAVL2	-1377887,1045,-3198,-2833
chr14:79740368-79740794	chr14	+	79740459	79740840	True	NM_001007023,NM_001105250,NM_138970	chr14,chr14,chr14	-,+,+	DIO2,NRXN3,NRXN3	937054,4813,4813
chrX:23351470-23351844	chrX	+	23351591	23351753	True	NM_173495,NM_001033583	chrX,chrX	+,-	PTCHD1,ACOT9	1231,409704
chr19:39393003-39393631	chr19	+	39393088	39393436	True	NM_002503,NM_030593,NM_001001716,NM_012237,NR_034146,NM_001193286	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,-,-,-	NFKBIB,SIRT2,NFKBIB,SIRT2,SIRT2,SIRT2	-2524,-2586,-2524,-2625,-8293,-2586
chr7:29690166-29690579	chr7	+	29690180	29690600	True	NR_036482,NR_024278	chr7,chr7	+,-	DPY19L2P3,LOC646762	34169,34204
chr6:158736294-158737894	chr6	+	158736428	158737930	True	NM_001007466,NM_020245,NM_032861	chr6,chr6,chr6	+,+,-	TULP4,TULP4,SERAC1	-2790,-2790,-147116
chr15:52312172-52312467	chr15	+	52312202	52312484	True	NM_138792,NM_002748	chr15,chr15	-,+	LEO1,MAPK6	-48244,-849
chr22:29458379-29458955	chr22	+	29458425	29458995	True	NM_001039570,NM_015370	chr22,chr22	+,-	KREMEN1,C22orf31	10070,-518
chr9:19382937-19383531	chr9	+	19383207	19383353	True	NM_001010,NM_001010887	chr9,chr9	-,+	RPS6,ACER2	-2972,25571
chr11:44970037-44970907	chr11	+	44970207	44970725	True	NM_006034,NR_026681,NM_001076787	chr11,chr11,chr11	-,+,-	TP53I11,LOC221122,TP53I11	1939,24727,1939
chr16:28889484-28889760	chr16	+	28889675	28889745	True	NM_003321,NM_173201,NM_004320	chr16,chr16,chr16	-,+,+	TUFM,ATP2A1,ATP2A1	-31946,63,63
chr1:55463196-55464528	chr1	+	55463583	55464441	True	NM_057176,NM_014762	chr1,chr1	+,-	BSND,DHCR24	175,-110662
chr19:50868171-50868794	chr19	+	50868640	50868770	True	NM_007121,NM_004851	chr19,chr19	+,-	NR1H2,NAPSA	10914,211
chr15:49255548-49256325	chr15	+	49255565	49256267	True	NM_014335,NM_203349	chr15,chr15	+,-	EID1,SHC4	-85326,76
chr6:34724093-34724552	chr6	+	34724200	34724311	True	NM_024294,NR_029472,NM_003093	chr6,chr6,chr6	-,+,+	C6orf106,SNRPC,SNRPC	-59575,559,559
chr1:85515351-85515581	chr1	+	85515381	85515581	True	NM_145172,NM_018298	chr1,chr1	+,-	WDR63,MCOLN3	12411,-1212
chr15:45248804-45249217	chr15	+	45248812	45249240	True	NM_014080,NM_152448	chr15,chr15	-,+	DUOX2,C15orf43	157169,30
chr4:72090396-72091895	chr4	+	72090550	72091781	True	NM_002092,NM_001134742	chr4,chr4	-,+	GRSF1,SLC4A4	-384923,-37606
chr4:40340381-40341120	chr4	+	40340493	40341033	True	NM_019027,NM_017581	chr4,chr4	-,+	RBM47,CHRNA9	177007,-3075
chr2:27813677-27814372	chr2	+	27813676	27813816	True	NM_001142683,NM_032434	chr2,chr2	-,+	CCDC121,ZNF512	37993,-7837
chr17:38296029-38296398	chr17	+	38296147	38296373	True	NM_021724,NM_007359	chr17,chr17	-,+	NR1D1,CASC3	-39174,133
chr18:60382678-60382881	chr18	+	60382727	60382891	True	NM_194449,NM_176787	chr18,chr18	+,-	PHLPP1,PIGN	-106,-528438
chr16:20341759-20342045	chr16	+	20341769	20341899	True	NM_017888,NM_001502,NM_001007240,NM_001007241,NM_001007242	chr16,chr16,chr16,chr16,chr16	+,-,-,-,-	ACSM5,GP2,GP2,GP2,GP2	78956,-2934,-2934,-2934,-2934
chr1:41153795-41155245	chr1	+	41153995	41154827	True	NR_024567,NM_014223,NM_001142589,NM_001142588,NM_001142587,NM_001142590	chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,+,+,+	LOC100130557,NFYC,NFYC,NFYC,NFYC,NFYC	3156,2414,2414,2414,2414,2852
chr1:27024128-27024334	chr1	+	27024151	27024265	True	NM_018066,NM_139135,NM_006015	chr1,chr1,chr1	-,+,+	GPN2,ARID1A,ARID1A	192654,-1680,-1680
chr15:83777104-83777342	chr15	+	83777103	83777359	True	NM_001144903,NM_023003,NM_025238	chr15,chr15,chr15	+,+,-	TM6SF1,TM6SF1,BTBD1	-830,-830,-40997
chr5:77589922-77590365	chr5	+	77589921	77590413	True	NM_003664,NM_004866	chr5,chr5	-,+	AP3B1,SCAMP1	165,65925
chr22:23331159-23332330	chr22	+	23331235	23332308	True	NM_002073,NM_014433	chr22,chr22	+,-	GNAZ,RTDR1	80360,151985
chr12:52284529-52285164	chr12	+	52284717	52285049	True	NM_182608,NM_001130015,NM_001013690	chr12,chr12,chr12	+,+,-	ANKRD33,ANKRD33,FIGNL2	-2975,-2975,-59016
chr12:133193197-133194980	chr12	+	133193384	133194907	True	NM_174872,NM_174873,NM_170683,NM_170682,NM_012226,NM_016318,NM_001195520	chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,+,+,+,+,-	P2RX2,P2RX2,P2RX2,P2RX2,P2RX2,P2RX2,LOC645277	495,495,495,495,495,495,-6347
chr3:88108007-88108211	chr3	+	88108178	88108256	True	NM_001008390,NM_003663,NM_000866	chr3,chr3,chr3	-,-,+	CGGBP1,CGGBP1,HTR1F	-32,-32,-76503
chr17:43503038-43504677	chr17_ctg5_hap1	+	118460	119590	False	NM_001113738,NM_174919,NM_199282	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	+,-,-	ARL17A,ARHGAP27,ARHGAP27	76130,5867,-324
chr17:43503038-43504677	chr17	+	43503336	43504466	True	NR_024435,NM_174919,NM_199282	chr17,chr17,chr17	+,-,-	LOC100133991,ARHGAP27,ARHGAP27	-163829,5866,-324
chr10:113929498-113930410	chr10	+	113929964	113930429	True	NM_058222,NM_020918	chr10,chr10	+,-	TECTB,GPAM	113063,13147
chr22:24271453-24271703	chr22	+	24271481	24271675	True	NM_001080843,NM_002415	chr22,chr22	-,+	GSTT2B,MIF	31743,-34967
chr15:85174269-85174650	chr15	+	85174521	85174643	True	NM_032856,NR_004859,NR_003654	chr15,chr15,chr15	-,+,+	WDR73,SCAND2,SCAND2	22928,47,47
chr9:130967842-130968523	chr9	+	130967946	130968338	True	NM_012127,NM_004408,NM_001005336,NM_001131015	chr9,chr9,chr9,chr9	-,+,+,-	CIZ1,DNM1,DNM1,CIZ1	-1284,-2334,-2334,-1284
chr11:8703920-8704260	chr11	+	8703984	8704248	True	NM_000990,NR_002977,NM_014818,NR_002580	chr11,chr11,chr11,chr11	+,+,-,+	RPL27A,SNORA45,TRIM66,SNORA3	-40,2737,-23601,1525
chr7:139539705-139540116	chr7	+	139539800	139540124	True	NR_029394,NM_022740	chr7,chr7	+,-	TBXAS1,HIPK2	-10911,-62107
chr12:120104414-120104922	chr12	+	120104569	120104943	True	NR_031589,NM_006253	chr12,chr12	-,+	MIR1178,PRKAB1	46636,817
chr14:58618101-58618495	chr14	+	58618218	58618408	True	NM_018477,NM_001001872	chr14,chr14	+,-	ACTR10,C14orf37	48424,489
chr5:89827112-89827533	chr5	+	89827163	89827492	True	NM_198273,NM_032119	chr5,chr5	-,+	LYSMD3,GPR98	-1762,27124
chr9:122123397-122124172	chr9	+	122123424	122123786	True	NR_027442,NM_014618	chr9,chr9	+,-	LOC100288842,DBC1	1431988,8003
chr10:47733468-47734342	chr10	+	47733800	47733858	True	NR_024495,NM_001630	chr10,chr10	-,+	LOC642826,ANXA8L2	-490306,13061
chr17:42143478-42143704	chr17	+	42143557	42143729	True	NR_028581,NR_028582,NM_138387,NM_152344	chr17,chr17,chr17,chr17	+,+,+,-	G6PC3,G6PC3,G6PC3,LSM12	4368,4368,4368,1308
chr1:28760450-28760699	chr1	+	28760575	28760737	True	NM_023923,NR_003077	chr1,chr1	+,-	PHACTR4,SNORD99	3923,144647
chr6:42531669-42531893	chr6	+	42531669	42531915	True	NM_015255,NM_001184801,NM_033502	chr6,chr6,chr6	+,+,-	UBR2,UBR2,TRERF1	34,34,-111886
chr19:10516295-10516828	chr19	+	10516350	10516650	True	NM_007065,NM_001111307,NR_031592	chr19,chr19,chr19	-,+,-	CDC37,PDE4A,MIR1181	-2079,14682,-2136
chrY:6321531-6323515	chrY	+	6321613	6323451	True	NR_001533,NR_001534,NR_003592	chrY,chrY,chrY	-,+,+	TTTY8,TTTY7,TTTY7B	18270,-4157,-4157
chrY:6321531-6323515	chrY	-	9546928	9548766	False	NR_003591,NR_001534,NR_003592	chrY,chrY,chrY	+,-,-	TTTY8B,TTTY7,TTTY7B	-18270,4157,4157
chr1:6446186-6446556	chr1	+	6446536	6446596	True	NM_007274,NM_181864,NM_031475	chr1,chr1,chr1	-,-,+	ACOT7,ACOT7,ESPN	7280,-653,38251
chr9:122120894-122121705	chr9	+	122121005	122121466	True	NR_027442,NM_014618	chr9,chr9	+,-	LOC100288842,DBC1	1434308,10336
chr22:39744693-39745682	chr22	+	39744795	39745675	True	NM_001033853,NM_145731,NM_004711	chr22,chr22,chr22	-,+,+	RPL3,SYNGR1,SYNGR1	-29125,278,278
chrX:48930102-48930335	chrX	+	48930261	48930339	True	NM_007213,NM_001163323,NM_001029896	chrX,chrX,chrX	-,+,-	PRAF2,CCDC120,WDR45	1373,-13789,7275
chr9:128024358-128024559	chr9	+	128024545	128024607	True	NM_005347,NM_015635	chr9,chr9	-,+	HSPA5,GAPVD1	-20879,-485
chr7:35840262-35840483	chr7	+	35840357	35840529	True	NM_022373,NM_001788,NM_001011553	chr7,chr7,chr7	-,+,+	HERPUD2,SEPT7,SEPT7	-105585,97,97
chr17:1463785-1464836	chr17	+	1464012	1464844	True	NM_006224,NR_028514	chr17,chr17	-,+	PITPNA,LOC100306951	1316,-43851
chr6:127778843-127780303	chr6	+	127778992	127780316	True	NM_014702,NM_001010905	chr6,chr6	-,+	KIAA0408,C6orf58	275,118002
chr9:38421884-38423122	chr9	+	38422116	38423155	True	NM_001007563,NM_000692	chr9,chr9	-,+	IGFBPL1,ALDH1B1	1344,-29465
chr11:74953619-74954193	chr11	+	74953672	74954210	True	NM_001195528,NR_029891	chr11,chr11	+,-	LOC441617,MIR326	-1773,92070
chr1:249119866-249120191	chr1	+	249119909	249120175	True	NR_036070,NM_030645	chr1,chr1	+,-	MIR3124,SH3BP5L	400,29
chr4:73432965-73433546	chr4	+	73433071	73433563	True	NM_053036,NM_014243	chr4,chr4	+,-	NPFFR2,ADAMTS3	-528280,1003
chr20:39970471-39971574	chr20	+	39970733	39971487	True	NM_052846,NM_022896	chr20,chr20	-,+	EMILIN3,LPIN3	24061,-1231
chr19:51506432-51507316	chr19	+	51506534	51507232	True	NM_012315,NM_144505,NM_144507,NM_144506,NM_014441,NM_007196	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,+,-	KLK9,KLK8,KLK8,KLK8,SIGLEC9,KLK8	5708,-1576,-1576,-1576,120904,-1576
chr13:58204436-58204769	chr13	+	58204499	58204805	True	NM_001040429,NM_030932	chr13,chr13	+,-	PCDH17,DIAPH3	983,2382588
chr19:1320727-1322220	chr19	+	1321267	1322095	True	NR_027271,NM_032853	chr19,chr19	-,+	C19orf23,MUM1	-51008,32880
chr1:201079323-201081297	chr1	+	201079352	201080889	True	NM_000069,NM_001164586	chr1,chr1	-,+	CACNA1S,IGFN1	856,79063
chr12:8335556-8336185	chr12	+	8335757	8335975	True	NM_018088,NR_026788	chr12,chr12	-,+	FAM90A1,FAM66C	44289,-3003
chr19:55257558-55258834	chr19	+	55257999	55258544	True	NM_001127255,NM_015868	chr19,chr19	-,+	NLRP7,KIR2DL3	200380,-8084
chr1:3571267-3571537	chr1	+	3571326	3571490	True	NM_001204188,NM_001204184,NM_005427,NM_001204186,NM_001204187,NM_001204185,NM_017818	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,+,-	TP73,TP73,TP73,TP73,TP73,TP73,WDR8	-2248,-2248,-2248,-2248,-2248,-2248,-4655
chr15:91475916-91477602	chr15	+	91476453	91477635	True	NM_018671,NM_198527,NM_001039675	chr15,chr15,chr15	+,-,+	UNC45A,HDDC3,UNC45A	579,-679,-3095
chr17:6939653-6940047	chr17	+	6939738	6940084	True	NM_153357,NM_201566	chr17,chr17	-,+	SLC16A11,SLC16A13	7208,-395
chr19:1106695-1107081	chr19	+	1106744	1107078	True	NM_001039847,NM_002085,NM_002695,NM_001039848	chr19,chr19,chr19,chr19	+,+,-,+	GPX4,GPX4,POLR2E,GPX4	-2859,-2859,-11353,-2146
chr12:44223813-44225639	chr12	+	44223986	44225337	True	NM_002822,NM_032256	chr12,chr12	-,+	TWF1,TMEM117	-23808,4624
chr3:115380466-115381265	chr3	+	115380687	115381279	True	NM_002045,NM_015642	chr3,chr3	+,-	GAP43,ZBTB20	-38587,-514560
chr2:242574228-242574889	chr2	+	242574248	242574892	True	NM_015963,NM_013325,NM_178326	chr2,chr2,chr2	-,+,+	THAP4,ATG4B,ATG4B	1883,2134,2134
chr5:177593108-177593340	chr5	+	177593202	177593364	True	NM_022762,NM_017838	chr5,chr5	+,-	RMND5B,NHP2	-35225,-12241
chrX:135622755-135624213	chrX	+	135622959	135623975	True	NR_030631,NM_004840,NM_016267	chrX,chrX,chrX	+,-,+	MIR934,ARHGEF6,VGLL1	9061,239578,-8699
chr21:19768945-19770591	chr21	+	19769216	19770636	True	NM_002772,NM_001204174	chr21,chr21	-,+	TMPRSS15,CHODL	5396,-151082
chr8:29599391-29599923	chr8	+	29599540	29599970	True	NR_026765,NR_024473	chr8,chr8	-,+	C8orf75,LOC286135	5705,179058
chr3:32233431-32234582	chr3	+	32233623	32234583	True	NM_017784,NM_178868	chr3,chr3	-,+	OSBPL10,CMTM8	-210281,45587
chr4:25513788-25514261	chr4	+	25513863	25514241	True	NM_015187,NM_013367	chr4,chr4	-,+	SEL1L3,ANAPC4	350419,-135066
chr3:8692578-8693683	chr3	+	8692705	8693349	True	NR_024065,NM_015931	chr3,chr3	+,-	LOH3CR2A,C3orf32	-79288,438
chr1:15253957-15254395	chr1	+	15253993	15254203	True	NM_001018000,NM_001018001,NR_027136	chr1,chr1,chr1	+,+,-	KAZN,KAZN,C1orf126	-3419,2092,224807
chr19:11999642-12000250	chr19	+	11999990	12000055	True	NM_021915,NM_001080411	chr19,chr19	+,-	ZNF69,ZNF433	-1378,146521
chr18:813532-813835	chr18	+	813580	813815	True	NM_001099733,NM_005433	chr18,chr18	+,-	ADCYAP1,YES1	91128,-1253
chrX:49639642-49641317	chrX	+	49639735	49641335	True	NM_001145073,NR_026742	chrX,chrX	+,-	USP27X,LOC158572	3134,2681
chr7:123251003-123251439	chr7	+	123251167	123251347	True	NM_080928,NM_005000	chr7,chr7	+,-	ASB15,NDUFA5	-2115,-53209
chr15:76018008-76018627	chr15	+	76018198	76018674	True	NM_175881,NM_001897	chr15,chr15	+,-	ODF3L1,CSPG4	-1936,-13009
chr20:3750519-3751076	chr20	+	3750566	3751073	True	NM_001039140,NM_004358	chr20,chr20	-,+	C20orf27,CDC25B	-2114,25327
chr2:30121936-30122614	chr2	+	30122039	30122399	True	NM_004304,NM_001127399	chr2,chr2	-,+	ALK,YPEL5	22129,247350
chr3:149372835-149374708	chr3	+	149373312	149374552	True	NM_007282,NM_001168280,NM_015472	chr3,chr3,chr3	+,-,-	RNF13,WWTR1,WWTR1	155922,1310,1386
chr12:49373758-49374081	chr12	+	49373847	49374021	True	NM_003394,NM_005430	chr12,chr12	-,+	WNT10B,WNT1	-8206,-1662
chr12:88177106-88178372	chr12	+	88177173	88178124	True	NM_001009894,NR_033410	chr12,chr12	+,-	C12orf29,MKRN9P	251143,421
chr17:63135394-63135672	chr17	+	63135447	63135711	True	NM_006572,NM_003835,NM_001165933,NM_001081955	chr17,chr17,chr17,chr17	-,+,+,+	GNA13,RGS9,RGS9,RGS9	-82527,-2042,-2042,-2042
chr10:97682800-97683700	chr10	+	97683116	97683460	True	NM_001130446,NR_036113	chr10,chr10	+,-	C10orf131,MIR3157	-15451,140746
chr7:56034330-56034736	chr7	+	56034492	56034784	True	NM_001202469,NM_001483,NM_004577	chr7,chr7,chr7	+,+,-	GBAS,GBAS,PSPH	-2274,-2274,84534
chr7:24325071-24325355	chr7	+	24325128	24325350	True	NM_001127453,NM_000905	chr7,chr7	-,+	DFNA5,NPY	471783,-1372
chr6:11094434-11094659	chr6	+	11094544	11094680	True	NM_001135575,NM_207582	chr6,chr6	+,-	LOC221710,ERVFRDE1	-329,17441
chr7:152459387-152460667	chr7	+	152459706	152460511	True	NM_005431,NM_020445,NM_001040135	chr7,chr7,chr7	-,+,+	XRCC2,ACTR3B,ACTR3B	-86456,-2921,-2921
chr16:2802295-2802589	chr16	+	2802331	2802497	True	NM_016333,NR_027274,NR_027275	chr16,chr16,chr16	+,-,-	SRRM2,LOC100128788,LOC100128788	-52,-7533,154
chr20:61148962-61149282	chr20	+	61149001	61149099	True	NR_033263,NR_029780,NM_178463	chr20,chr20,chr20	-,+,+	C20orf200,MIR1-1,C20orf166	-233,2413,-1392
chr16:30381794-30382515	chr16	+	30381977	30382473	True	NM_013292,NM_015527	chr16,chr16	+,-	MYLPF,TBC1D10B	3649,-455
chr16:2288298-2288663	chr16	+	2288362	2288708	True	NM_001374,NM_001178029	chr16,chr16	+,-	DNASE1L2,ECI1	-1945,12944
chr3:142441402-142443116	chr3	+	142441632	142442940	True	NM_003304,NM_001184	chr3,chr3	+,-	TRPC1,ATR	325,-143964
chr1:27152517-27153032	chr1	+	27152637	27152969	True	NM_018066,NM_032283	chr1,chr1	-,+	GPN2,ZDHHC18	63950,231
chr7:73153651-73153958	chr7	+	73153657	73153930	True	NM_148912,NM_148913,NR_026910,NR_026912,NR_026690,NM_001145364	chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,+,-	ABHD11,ABHD11,ABHD11,ABHD11,WBSCR26,ABHD11	-473,-473,-473,-467,-4309,-473
chr17:15165058-15166371	chr17	+	15165208	15166084	True	NM_000304,NR_033371,NM_153321,NM_153322	chr17,chr17,chr17,chr17	-,+,-,-	PMP22,CDRT7,PMP22,PMP22	2610,-230967,-1,-1115
chr5:131104414-131105361	chr5	+	131104781	131105375	True	NM_001008738,NM_000588	chr5,chr5	-,+	FNIP1,IL3	27431,290971
chr7:135434476-135435171	chr7	+	135434842	135435003	True	NM_205855,NM_001130929	chr7,chr7	-,+	FAM180A,PL-5283	-1248,-87673
chr1:11073945-11074915	chr1	+	11074035	11074723	True	NM_007375,NM_001170754	chr1,chr1	+,-	TARDBP,C1orf127	-1414,-31941
chr5:125969644-125969978	chr5	+	125969644	125969737	True	NM_001202404,NM_207408	chr5,chr5	-,+	ALDH7A1,C5orf48	-38562,-2285
chr5:39400627-39401945	chr5	+	39400675	39401772	True	NM_001343,NM_003999	chr5,chr5	-,+	DAB2,OSMR	23614,-554625
chr3:150481315-150481796	chr3	+	150481425	150481835	True	NM_005067,NM_016275	chr3,chr3	-,+	SIAH2,SELT	-162,-160410
chr10:38148530-38150517	chr10	+	38148852	38150452	True	NM_021045,NM_006954	chr10,chr10	-,+	ZNF248,ZNF33A	-2366,149125
chr9:100294029-100294398	chr9	+	100294031	100294435	True	NM_139246,NM_003275	chr9,chr9	-,+	TSTD2,TMOD1	101577,-30161
chr21:36258495-36258811	chr21	+	36258501	36258854	True	NR_024351,NM_001001890,NM_001122607	chr21,chr21,chr21	+,-,-	NCRNA00160,RUNX1,RUNX1	-162447,2183,2183
chr12:7339727-7341018	chr12	+	7339983	7340982	True	NM_000319,NM_031491,NM_001131026,NM_001131024,NM_001131025,NM_001131023	chr12,chr12,chr12,chr12,chr12,chr12	+,-,+,+,+,+	PEX5,RBP5,PEX5,PEX5,PEX5,PEX5	1975,-58517,776,1299,1299,1299
chr5:179234743-179235070	chr5	+	179234937	179235015	True	NR_031598,NM_001142299,NM_001142298,NM_014275,NM_054013	chr5,chr5,chr5,chr5,chr5	-,+,+,-,-	MIR1229,SQSTM1,SQSTM1,MGAT4B,MGAT4B	-9591,-985,-1600,-985,-5062
chrX:55178617-55179878	chrX	+	55178874	55179564	True	NM_001166703,NM_001166702,NR_030722,NM_001166700,NM_001166699,NM_001166704,NM_001166701,NM_138362,NM_207339	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,-,-,-,+	FAM104B,FAM104B,FAM104B,FAM104B,FAM104B,FAM104B,FAM104B,FAM104B,PAGE2	8033,8065,8126,8126,8126,8126,8126,8126,-63435
chr16:19000294-19001775	chr16	+	19000391	19000549	True	NM_015092,NM_024847,NM_001160364	chr16,chr16,chr16	-,+,+	SMG1,TMC7,TMC7	-62665,-5192,-4839
chr13:73383858-73384194	chr13	+	73384016	73384241	True	NM_006346,NM_014953	chr13,chr13	+,-	PIBF1,DIS3	-27844,-27672
chr12:121568325-121569140	chr12	+	121568453	121569169	True	NM_198213,NM_002562,NR_033949,NR_033948,NR_033952,NR_033953,NR_033950,NR_033951,NR_033956,NR_033954,NR_033955	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,+,+,+,+,+,+,+,+	OASL,P2RX7,P2RX7,P2RX7,P2RX7,P2RX7,P2RX7,P2RX7,P2RX7,P2RX7,P2RX7	-91673,1461,1461,1461,1461,1452,1461,1461,1461,1461,1461
chr1:223193975-223194248	chr1	+	223193995	223194279	True	NM_032890,NM_003268	chr1,chr1	+,-	DISP1,TLR5	-205615,122395
chr1:16305115-16307099	chr1	+	16306259	16307030	True	NM_003443,NM_178840	chr1,chr1	-,+	ZBTB17,C1orf64	-3632,23700
chr22:40252133-40252829	chr22	+	40252374	40252627	True	NM_004810,NM_152512	chr22,chr22	+,-	GRAP2,ENTHD1	44458,37230
chr17:41559326-41560550	chr17	+	41559390	41560388	True	NM_001986,NM_004941	chr17,chr17	-,+	ETV4,DHX8	62967,945
chr2:74421629-74422852	chr2	+	74421853	74422859	True	NR_027405,NM_018221,NM_006636	chr2,chr2,chr2	+,-,+	MTHFD2,MOBKL1B,MTHFD2	2830,-15858,2830
chr17:79623039-79623589	chr17	+	79623049	79623429	True	NM_002602,NM_199287,NR_026872	chr17,chr17,chr17	-,+,-	PDE6G,CCDC137,PDE6G	228,10331,228
chr3:9917691-9918827	chr3	+	9917777	9918817	True	NM_032492,NM_022094,NM_001199623,NM_001199552,NM_001199551	chr3,chr3,chr3,chr3,chr3	+,-,-,-,-	JAGN1,CIDEC,CIDEC,CIDEC,CIDEC	13453,1973,1729,3171,3171
chr9:93398668-93399974	chr9	+	93398919	93400021	True	NM_017594,NM_001135052	chr9,chr9	-,+	DIRAS2,SYK	5139,163990
chr2:179665287-179666464	chr2	+	179665350	179666480	True	NM_133432,NM_133437,NM_003319,NM_019091,NM_133378,NM_133379	chr2,chr2,chr2,chr2,chr2,chr2	-,-,-,+,-,-	TTN,TTN,TTN,PLEKHA3,TTN,TTN	5722,5722,5722,-320202,5722,5722
chr1:39489936-39491117	chr1	+	39490643	39491000	True	NM_001184979,NM_017821,NM_004552	chr1,chr1,chr1	+,-,+	NDUFS5,RHBDL2,NDUFS5	966,-83187,966
chr17:40168840-40169215	chr17	+	40168849	40169125	True	NM_003315,NM_001144928,NM_001144766,NM_001144929,NR_029431,NM_017595,NM_001144927,NM_001001349	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,-,+,-,+,+,+	DNAJC7,NKIRAS2,DNAJC7,NKIRAS2,DNAJC7,NKIRAS2,NKIRAS2,NKIRAS2	640,2961,108,2961,640,2961,2961,468
chr2:24301913-24303821	chr2	+	24302198	24303465	True	NM_147184,NM_054033,NM_004881,NM_016047	chr2,chr2,chr2,chr2	-,+,-,-	TP53I3,FKBP1B,TP53I3,SF3B14	4240,-29666,4313,-2884
chr19:56515548-56516382	chr19	+	56515577	56516175	True	NM_176810,NM_153447	chr19,chr19	-,+	NLRP13,NLRP5	-71875,-4538
chr2:132203743-132205452	chr2	+	132203751	132205270	True	NR_002826,NM_080386	chr2,chr2	-,+	LOC401010,TUBA3D	-1284,28395
chr2:132203743-132205452	chr2	-	130984148	130985270	False	NM_025029,NM_207312	chr2,chr2	+,-	MZT2B,TUBA3E	-44707,-28114
chr19:18391794-18392169	chr19	+	18391842	18392168	True	NM_001145304,NR_036155,NM_005354,NM_001145305,NM_025249	chr19,chr19,chr19,chr19,chr19	-,+,-,-,-	KIAA1683,MIR3188,JUND,KIAA1683,KIAA1683	-6523,718,314,-6523,-6523
chr16:27414837-27415538	chr16	+	27415011	27415585	True	NM_181078,NM_181079,NR_037158	chr16,chr16,chr16	+,+,-	IL21R,IL21R,LOC283888	-1579,-1579,49179
chr2:96066790-96068222	chr2	+	96067188	96067858	True	NM_001164464,NM_016044	chr2,chr2	-,+	TRIM43B,FAHD2A	82671,589
chr5:153783767-153784656	chr5	+	153783847	153784517	True	NR_037897,NM_001131062	chr5,chr5	-,+	FLJ38109,SAP30L	40923,40999
chr19:14224113-14224423	chr19	+	14224221	14224467	True	NR_024282,NM_207518,NM_002730	chr19,chr19,chr19	+,-,-	LOC113230,PRKACA,PRKACA	-40451,575,4142
chr19:2271717-2271918	chr19	+	2271776	2271894	True	NM_004152,NM_198532	chr19,chr19	+,-	OAZ1,C19orf35	-2307,10337
chr6:43140489-43141699	chr6	+	43140943	43141699	True	NM_006443,NM_003131,NM_015089	chr6,chr6,chr6	-,+,+	C6orf108,SRF,CUL9	55562,-2076,8222
chr9:117349410-117349619	chr9	+	117349432	117349616	True	NM_015404,NM_004888	chr9,chr9	-,+	DFNB31,ATP6V1G1	-81696,377
chr8:17244575-17246449	chr8	+	17244688	17246167	True	NM_001008539,NM_004686	chr8,chr8	+,-	SLC7A2,MTMR7	108429,24929
chr11:1888855-1889391	chr11	+	1888896	1889404	True	NR_036185,NM_001013254,NM_001013255,NM_001013253	chr11,chr11,chr11,chr11	-,+,+,+	MIR4298,LSP1,LSP1,LSP1	-8130,2694,2749,498
chr3:13520683-13520980	chr3	+	13520692	13520888	True	NM_001136041,NM_024827,NM_024923	chr3,chr3,chr3	+,+,-	HDAC11,HDAC11,NUP210	955,826,-58883
chr5:1346059-1346924	chr5	+	1346077	1346971	True	NM_182632,NM_030782	chr5,chr5	+,-	SLC6A18,CLPTM1L	-120658,-1075
chr5:177615516-177615762	chr5	+	177615527	177615797	True	NR_003281,NM_004499	chr5,chr5	-,+	GMCL1L,HNRNPAB	-1094,15710
chr7:100495070-100496340	chr7	+	100495117	100496262	True	NM_000665,NM_015908,NM_015831,NM_001015072	chr7,chr7,chr7,chr7	-,+,-,-	ACHE,SRRT,ACHE,UFSP1	-1576,-22467,-1576,-7778
chr11:1969637-1970598	chr11	+	1969898	1970324	True	NR_024471,NM_021134	chr11,chr11	-,+	LOC100133545,MRPL23	40876,-1448
chr1:115878802-115880186	chr1	+	115878892	115879974	True	NM_002506,NM_001172411	chr1,chr1	-,+	NGF,VANGL1	934,304599
chr11:30607148-30607374	chr11	+	30607177	30607405	True	NM_001145399,NM_001584,NM_152316	chr11,chr11,chr11	-,-,+	MPPED2,MPPED2,C11orf46	575,-5137,-262579
chr1:15913400-15913907	chr1	+	15913408	15913920	True	NM_032341,NM_024758	chr1,chr1	+,-	DDI2,AGMAT	30032,-1803
chr2:73494609-73495201	chr2	+	73494610	73495214	True	NR_029403,NM_001080410	chr2,chr2	+,-	CCT7,FBXO41	-33297,1594
chr1:16972656-16972897	chr3	-	49725322	49725382	True	NM_022064,NM_020998	chr3,chr3	+,-	RNF123,MST1	1607,874
chr1:16972656-16972897	chr1	+	16972795	16972901	False	NR_027504,NR_026752	chr1,chr1	+,-	MST1P2,CROCCP2	-777,-15394
chr12:52444100-52444309	chr12	+	52444132	52444350	True	NM_002135,NM_173157,NM_001081492	chr12,chr12,chr12	+,+,-	NR4A1,NR4A1,KRT80	835,835,141484
chr9:4792912-4793214	chr9	+	4792913	4793231	True	NM_005772,NM_001199853	chr9,chr9	+,-	RCL1,AK3	-130,-50870
chr3:125566870-125567150	chr3	+	125566908	125567002	True	NR_024250,NR_031687	chr3,chr3	+,-	LOC100125556,MIR548I1	68441,-57513
chr2:203104234-203105053	chr2	+	203104291	203104817	True	NM_003352,NM_001005782,NM_001005781,NM_015934	chr2,chr2,chr2,chr2	-,-,-,+	SUMO1,SUMO1,SUMO1,NOP58	-969,-969,-969,25697
chr1:32232097-32232486	chr1	+	32232300	32232410	True	NM_001703,NR_036216,NM_001525	chr1,chr1,chr1	-,-,+	BAI2,MIR4254,HCRTR1	-2652,-7964,-149050
chr9:72660547-72661421	chr9	+	72660699	72661418	True	NM_153267,NM_001099666	chr9,chr9	+,-	MAMDC2,PTAR1	-2253,-285823
chr17:7516168-7517256	chr17	+	7516335	7517242	True	NR_027463,NM_004860	chr17,chr17	+,-	SHBG,FXR2	139,1023
chr12:7010560-7010963	chr12	+	7010697	7010803	True	NM_032641,NM_201650,NM_006992,NM_001135217	chr12,chr12,chr12,chr12	-,+,+,+	SPSB2,LRRC23,LRRC23,LRRC23	-28176,3093,3093,3093
chr19:36704694-36705289	chr19	+	36704727	36705229	True	NM_001042474,NM_007145,NM_152477,NM_001099638,NM_001099639	chr19,chr19,chr19,chr19,chr19	-,+,-,+,+	ZNF565,ZNF146,ZNF565,ZNF146,ZNF146	807,274,387,274,274
chrX:154002228-154002545	chrX	+	154002256	154002576	True	NR_002984,NM_080612,NR_002969	chrX,chrX,chrX	+,-,+	SNORA56,GAB3,SNORA36A	696,-22908,-5504
chr1:24438119-24438612	chr1	+	24438125	24438661	True	NM_152372,NR_027087	chr1,chr1	-,+	MYOM3,LOC284632	54,88068
chr7:131377083-131377380	chr7	+	131377087	131377407	True	NM_005397,NM_013255	chr7,chr7	-,+	PODXL,MKLN1	-135711,-364543
chr5:78535679-78535929	chr5	+	78535687	78535828	True	NM_013391,NM_152405	chr5,chr5	-,+	DMGDH,JMY	-170238,-3817
chrX:79828489-79828720	chrX	+	79828587	79828723	True	NM_152630,NM_153252	chrX,chrX	+,-	FAM46D,BRWD3	-152692,236560
chr2:42275811-42276107	chr2	+	42275818	42276124	True	NM_138370,NM_004718	chr2,chr2	+,-	PKDCC,COX7A2L	-708,312282
chr10:6370011-6370291	chr10	+	6370016	6370324	True	NM_004566,NM_006257	chr10,chr10	+,-	PFKFB3,PRKCQ	-125227,251964
chr1:45794040-45794633	chr1	+	45794062	45794536	True	NM_001048174,NM_032756	chr1,chr1	-,+	MUTYH,HPDL	11143,-1568
chr19:1524462-1525045	chr19	+	1524632	1525082	True	NR_026557,NM_213604	chr19,chr19	+,-	PLK5P,ADAMTSL5	-605,-11444
chr20:56100586-56102289	chr20	+	56100838	56102124	True	NM_002591,NM_080618	chr20,chr20	+,-	PCK1,CTCFL	34012,-684
chr2:241505531-241505955	chr2	+	241505541	241505843	True	NM_001033575,NM_017844,NM_018226,NM_016552	chr2,chr2,chr2,chr2	+,-,+,-	DUSP28,ANKMY1,RNPEPL1,ANKMY1	-6121,-8136,2160,-8136
chr7:53100002-53100860	chr7	+	53100188	53100894	True	NM_182595,NR_004422	chr7,chr7	+,-	POM121L12,HPVC1	2454,1169275
chr14:105258718-105259786	chr14	+	105258917	105259834	True	NM_005163,NM_001014432,NM_001014431,NM_001137601	chr14,chr14,chr14,chr14	-,-,-,+	AKT1,AKT1,AKT1,ZBTB42	154,2296,2296,7098
chr6:161126735-161127797	chr6	+	161127073	161127852	True	NM_000301,NM_001168338,NM_005577	chr6,chr6,chr6	+,+,-	PLG,PLG,LPA	-3900,-3900,-39666
chr11:66188866-66189112	chr11	+	66188965	66189069	True	NM_178864,NM_016050	chr11,chr11	+,-	NPAS4,MRPL11	-541,17291
chr12:49181295-49181552	chr12	+	49181328	49181566	True	NM_000725,NM_020983,NM_015270	chr12,chr12,chr12	+,-,-	CACNB3,ADCY6,ADCY6	30945,1304,-3451
chr1:33495401-33495962	chr1	+	33495461	33495869	True	NM_001625,NR_037592,NM_001199199,NM_013411,NR_037591,NM_052998	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,+	AK2,AK2,AK2,AK2,AK2,ADC	6701,6701,6701,6701,6701,50844
chr1:154529770-154530766	chr1	+	154529786	154530562	True	NM_000748,NM_017582	chr1,chr1	+,-	CHRNB2,UBE2Q1	9694,608
chr14:63477921-63478497	chr14	+	63478264	63478538	True	NM_139318,NM_020663	chr14,chr14	-,+	KCNH5,RHOJ	33467,192606
chr7:100329132-100329487	chr7	+	100329206	100329357	True	NM_173059,NM_003386,NM_022574	chr7,chr7,chr7	+,+,-	ZAN,ZAN,GIGYF1	1891,1891,-42336
chr7:142463305-142464285	chr7	+	142463614	142464326	True	NM_002769,NM_018646	chr7,chr7	+,-	PRSS1,TRPV6	-6346,119201
chrX:36982192-36982553	chrX	+	36982217	36982408	True	NM_006520,NM_001013736	chrX,chrX	-,+	DYNLT3,FAM47C	724531,44023
chr2:36948125-36948833	chr2	+	36948195	36948797	True	NM_053276,NM_005102	chr2,chr2	+,-	VIT,FEZ2	-24426,-122863
chr11:64691087-64691487	chr11	+	64691099	64691469	True	NM_015104,NM_006244	chr11,chr11	-,+	ATG2A,PPP2R5B	-6377,673
chr2:172573338-172573782	chr2	+	172573430	172573609	True	NM_003705,NM_001378	chr2,chr2	-,+	SLC25A12,DYNC1I2	177263,-29506
chr5:141059285-141059888	chr5	+	141059303	141059925	True	NM_022481,NM_173828	chr5,chr5	-,+	ARAP3,RELL2	1925,-42837
chr1:70654273-70656273	chr1	+	70654756	70656315	True	NM_017768,NM_001190987	chr1,chr1	-,+	LRRC40,SRSF11	15096,15049
chr11:17298542-17298778	chr11	+	17298542	17298754	True	NM_002645,NM_005013	chr11,chr11	-,+	PIK3C2A,NUCB2	-107188,-307
chr15:45494461-45495156	chr15	+	45494657	45495069	True	NM_138356,NM_004212	chr15,chr15	-,+	SHF,SLC28A2	-1284,49358
chr14:74417973-74419671	chr14	+	74417976	74419718	True	NM_182480,NM_152445,NM_182476	chr14,chr14,chr14	+,-,+	COQ6,FAM161B,COQ6	-1394,-1141,-1081
chr1:206729046-206729256	chr1	+	206729112	206729256	True	NM_182665,NM_001201478	chr1,chr1	+,-	RASSF5,EIF2D	1235,56698
chr17:4870427-4870757	chr17	+	4870436	4870686	True	NM_004890,NM_053013	chr17,chr17	-,+	SPAG7,ENO3	496,-16103
chr3:97745403-97746170	chr3	+	97745508	97746127	True	NM_001105580,NM_054106	chr3,chr3	-,+	GABRR3,OR5AC2	7755,59889
chr20:34641543-34643494	chr20	+	34641620	34643192	True	NM_177996,NR_027451	chr20,chr20	+,-	EPB41L1,LOC647979	57155,-2738
chr12:124461549-124462182	chr12	+	124461803	124462207	True	NM_152437,NM_025140,NM_001204298,NM_001204299	chr12,chr12,chr12,chr12	+,-,+,+	ZNF664,CCDC92,ZNF664,ZNF664-FAM101A	-4102,-4640,-4102,-4102
chr15:91427786-91428454	chr15	+	91428034	91428436	True	NM_002005,NM_001143783,NM_198527,NM_001143784,NM_001143785	chr15,chr15,chr15,chr15,chr15	+,+,-,+,+	FES,FES,HDDC3,FES,FES	-397,-101,47388,-101,-420
chr1:33430583-33431886	chr1	+	33430692	33431699	True	NM_002143,NM_001127361,NM_153341	chr1,chr1,chr1	+,-,-	HPCA,RNF19B,RNF19B	-78647,-406,-406
chr1:161493331-161493644	chr1	+	161493374	161493593	True	NM_000569,NM_002155	chr1,chr1	-,+	FCGR3A,HSPA6	26282,442
chr2:33655061-33656638	chr2	+	33655064	33656529	True	NM_015475,NM_170672	chr2,chr2	-,+	FAM98A,RASGRP3	167884,4886
chr19:54568928-54569225	chr19	+	54569010	54569278	True	NM_198481,NM_004542	chr19,chr19	-,+	VSTM1,NDUFA3	-1803,36881
chr12:12489619-12490349	chr12	+	12489735	12489826	True	NM_058169,NM_018050	chr12,chr12	+,-	LOH12CR1,MANSC1	20193,13402
chr13:25251177-25252998	chr13	+	25251285	25252633	True	NM_001185085,NM_006437,NM_001676	chr13,chr13,chr13	+,-,+	ATP12A,PARP4,ATP12A	1915,-164337,1915
chr21:30257461-30257764	chr21	+	30257467	30257807	True	NM_013240,NM_001001992,NM_182749	chr21,chr21,chr21	-,+,-	N6AMT1,USP16,N6AMT1	32,139130,32
chr7:44581592-44582092	chr7	+	44581682	44582028	True	NM_001101648,NM_001003941,NM_013389	chr7,chr7,chr7	-,+,-	NPC1L1,OGDH,NPC1L1	-768,64092,-768
chr16:57279697-57280570	chr16	+	57279761	57280331	True	NM_015993,NM_012106	chr16,chr16	-,+	PLLP,ARL2BP	38303,-782
chr1:21835911-21836119	chr1	+	21835934	21836030	True	NM_001177520,NM_001145658,NM_000478,NM_001127501	chr1,chr1,chr1,chr1	+,-,+,+	ALPL,RAP1GAP,ALPL,ALPL	-127,142368,-127,-127
chr17:79933730-79934437	chr17	+	79933854	79934358	True	NM_178493,NM_024083	chr17,chr17	-,+	NOTUM,ASPSCR1	-14797,1067
chr1:100610321-100610907	chr1	+	100610379	100610825	True	NM_019083,NM_194292	chr1,chr1	+,-	CCDC76,SASS6	-11738,-11868
chr2:152217883-152219095	chr2	+	152218065	152218820	True	NM_007115,NM_004688	chr2,chr2	+,-	TNFAIP6,NMI	-4018,-71635
chr19:51363027-51363343	chr19	+	51363054	51363358	True	NM_138564,NM_001030047,NM_001030048,NM_001648,NM_001030050	chr19,chr19,chr19,chr19,chr19	-,+,+,+,+	KLK15,KLK3,KLK3,KLK3,KLK3	-28275,-4934,-4934,-4934,-4934
chr14:105559120-105559411	chr14	+	105559191	105559441	True	NM_174891,NM_013345	chr14,chr14	+,-	C14orf79,GPR132	-106626,-27437
chr11:509494-509706	chr11	+	509494	509556	True	NM_002939,NM_198075,NM_203389,NM_203388,NM_203387,NM_203386,NM_203385,NM_203384,NM_203383	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,+,-,-,-,-,-,-,-	RNH1,LRRC56,RNH1,RNH1,RNH1,RNH1,RNH1,RNH1,RNH1	-2673,27965,-2221,-2221,-2221,-2221,-2673,-2673,-2673
chr16:6070575-6070864	chr16	+	6070705	6070893	True	NM_018723,NM_001142333,NM_201598	chr16,chr16,chr16	+,+,-	RBFOX1,RBFOX1,FAM86A	-1624,-1624,-922916
chr5:115142226-115143767	chr5	+	115142342	115143522	True	NM_001284,NM_001801	chr5,chr5	+,-	AP3S1,CDO1	34096,8935
chr12:2943642-2943897	chr12	+	2943680	2943914	True	NM_018463,NM_031474	chr12,chr12	+,-	ITFG2,NRIP2	-21944,357
chr14:103239303-103240279	chr14	+	103239691	103240109	True	NM_145726,NM_152326,NM_001199427,NM_003300,NM_145725	chr14,chr14,chr14,chr14,chr14	+,-,+,+,+	TRAF3,ANKRD9,TRAF3,TRAF3,TRAF3	3706,-263563,3706,3706,3706
chr1:33284102-33284938	chr1	+	33284114	33284728	True	NM_003680,NM_001017406,NM_022753	chr1,chr1,chr1	-,+,+	YARS,S100PBP,S100PBP	-481,-991,-991
chr2:32294164-32295225	chr2	+	32294370	32294604	True	NM_199436,NM_032574,NM_014946	chr2,chr2,chr2	+,-,+	SPAST,DPY30,SPAST	-5748,-29526,-5748
chr2:169840325-169841560	chr2	+	169840431	169841166	True	NM_005771,NM_003742	chr2,chr2	+,-	DHRS9,ABCB11	80132,46729
chr19:55345685-55346259	chr19	+	55345729	55346307	True	NM_012314,NM_001127255	chr19,chr19	+,-	KIR2DS4,NLRP7	-1606,112616
chr12:133759587-133760782	chr12	+	133759648	133760557	True	NM_001191054,NM_152943,NM_003415,NM_001165885,NM_001165884,NM_001165887,NM_001165886,NM_001165881,NM_001165883	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,+,+,+,+,+,+	LOC647589,ZNF268,ZNF268,ZNF268,ZNF268,ZNF268,ZNF268,ZNF268,ZNF268	51929,-1704,-1704,-1704,-1704,-1704,-1704,-1639,-1704
chr1:246578312-246579019	chr1	+	246578328	246578852	True	NM_001139459,NM_022743	chr1,chr1	+,-	CNST,SMYD3	150786,1912
chr21:34439528-34440043	chr21	+	34439579	34439971	True	NR_024102,NM_138983	chr21,chr21	-,+	C21orf54,OLIG1	102620,2478
chr12:69202279-69202559	chr12	+	69202324	69202498	True	NM_001005502,NM_002392	chr12,chr12	-,+	CPM,MDM2	124531,-404
chr2:241528218-241528776	chr2	+	241528414	241528776	True	NM_017844,NM_023083,NM_023085	chr2,chr2,chr2	-,+,+	ANKMY1,CAPN10,CAPN10	-31009,-2340,-2340
chr7:64840683-64842570	chr7	+	64840766	64842441	True	NM_152626,NM_001007253,NM_007139	chr7,chr7,chr7	+,-,+	ZNF92,ERV3,ZNF92	-2051,-373642,-2051
chr11:35640736-35640987	chr11	+	35640739	35640945	True	NM_015430,NM_014344	chr11,chr11	-,+	PAMR1,FJX1	-93563,-1055
chr9:139623856-139624216	chr9	+	139623929	139624253	True	NR_003672,NR_024543,NR_024542,NR_002975,NR_033913,NR_002958	chr9,chr9,chr9,chr9,chr9,chr9	-,-,-,-,+,-	SNHG7,SNHG7,SNHG7,SNORA43,LOC100128593,SNORA17	-1293,-1293,-1293,-3240,16359,-2598
chr21:46340633-46341004	chr21	+	46340797	46341037	True	NM_058190,NM_000211,NM_001127491	chr21,chr21,chr21	+,-,-	C21orf70,ITGB2,ITGB2	18917,0,7766
chr7:135190022-135191450	chr7	+	135190361	135191199	True	NM_001190847,NM_001190850,NM_001190849,NM_001190848,NM_001008225,NM_015135,NM_013316	chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,+,-	CNOT4,CNOT4,CNOT4,CNOT4,CNOT4,NUP205,CNOT4	3735,3735,3735,3735,3735,51462,3735
chr20:32845187-32845872	chr20	+	32845208	32845677	True	NM_001672,NM_000687	chr20,chr20	+,-	ASIP,AHCY	2493,45593
chr2:113929492-113929807	chr2	+	113929520	113929816	True	NM_012455,NM_003466	chr2,chr2	+,-	PSD4,PAX8	1743,106732
chr16:85343384-85343830	chr16	+	85343415	85343675	True	NR_033984,NM_198491	chr16,chr16	+,-	LOC400548,FAM92B	-172710,-197301
chr19:53359878-53360440	chr19	+	53360148	53360430	True	NM_199132,NM_152473,NM_001008801	chr19,chr19,chr19	-,+,-	ZNF468,HERV-V1,ZNF468	522,156913,522
chr19:53359878-53360440	chr19	+	53324394	53324444	False	NR_036599,NR_036600,NM_152473,NM_006969	chr19,chr19,chr19,chr19	-,-,+,-	ZNF28,ZNF28,HERV-V1,ZNF28	528,528,192899,528
chr3:131729468-131731058	chr3	+	131729482	131730846	True	NM_001099,NM_130808	chr3,chr3	+,-	ACPP,CPNE4	305364,23048
chr6:30874987-30875455	chr6_qbl_hap6	+	2168218	2168279	False	NM_205854,NM_001167733,NM_020442,NM_001517,NM_001167734	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	-,+,+,+,+	SFTA2,VARS2,VARS2,GTF2H4,VARS2	24695,6687,6687,682,6813
chr6:30874987-30875455	chr6_mcf_hap5	+	2257188	2257249	False	NM_205854,NM_001167733,NM_020442,NM_001517,NM_001167734	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	-,+,+,+,+	SFTA2,VARS2,VARS2,GTF2H4,VARS2	24693,6687,6687,682,6813
chr6:30874987-30875455	chr6_mann_hap4	+	2223312	2223373	False	NM_205854,NM_001167733,NM_020442,NM_001517,NM_001167734	chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4	-,+,+,+,+	SFTA2,VARS2,VARS2,GTF2H4,VARS2	24711,6687,6687,682,6813
chr6:30874987-30875455	chr6	+	30875233	30875294	True	NM_205854,NM_001167733,NM_020442,NM_001517,NM_001167734	chr6,chr6,chr6,chr6,chr6	-,+,+,+,+	SFTA2,VARS2,VARS2,GTF2H4,VARS2	24709,6687,6687,682,6813
chr6:30874987-30875455	chr6_cox_hap2	+	2387308	2387369	False	NM_205854,NM_001167733,NM_020442,NM_001517,NM_001167734	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	-,+,+,+,+	SFTA2,VARS2,VARS2,GTF2H4,VARS2	24557,6687,6687,682,6813
chr10:3213726-3214342	chr10	+	3213919	3214321	True	NM_002627,NM_014889	chr10,chr10	+,-	PFKP,PITRM1	-104220,732
chr15:65118092-65119014	chr15	+	65118097	65118583	True	NM_001195059,NM_025049	chr15,chr15	+,-	PLEKHO2,PIF1	15498,-259
chr2:30451665-30452681	chr2	+	30451690	30452628	True	NM_004304,NM_030915	chr2,chr2	-,+	ALK,LBH	-307213,1768
chr11:1605880-1606114	chr11	+	1606030	1606100	True	NM_001005922,NR_021489	chr11,chr11	-,+	KRTAP5-1,LOC338651	463,-12110
chr11:1605880-1606114	chr11	-	1651005	1651315	False	NM_001012709,NM_001001480	chr11,chr11	-,+	KRTAP5-4,KRTAP5-5	-7637,-263
chr1:161276405-161277146	chr1	+	161276501	161276941	True	NM_003001,NM_000530,NM_001035511,NM_001035513,NM_001035512	chr1,chr1,chr1,chr1,chr1	+,-,+,+,+	SDHC,MPZ,SDHC,SDHC,SDHC	7224,2871,7224,7224,7224
chr17:37893003-37893245	chr17	+	37893007	37893241	True	NM_032339,NM_001030002,NM_005310	chr17,chr17,chr17	-,+,+	C17orf37,GRB7,GRB7	-6219,1348,945
chr1:205748196-205748827	chr1	+	205748195	205748638	True	NM_003929,NM_001135662,NM_001135663,NM_001135664,NM_181644	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	RAB7L1,RAB7L1,RAB7L1,RAB7L1,MFSD4	-3585,-3585,-3585,-3585,-210134
chr2:107124921-107125822	chr2	+	107125028	107125871	True	NM_001144013,NR_003506	chr2,chr2	-,+	RGPD3,PLGLA	-40227,-122310
chr2:107124921-107125822	chr2	-	87067369	87067797	False	NR_037931,NM_001178100	chr2,chr2	+,-	LOC100286979,CD8B	21150,21300
chr2:238602685-238603299	chr2	+	238602712	238603232	True	NM_001137551,NM_001137552,NM_001137553,NM_004735,NR_033308	chr2,chr2,chr2,chr2,chr2	+,+,+,+,-	LRRFIP1,LRRFIP1,LRRFIP1,LRRFIP1,RAB17	-1956,-1956,-1956,-1956,-102943
chr7:143013442-143014432	chr7	+	143013662	143014342	True	NM_000083,NM_014690	chr7,chr7	+,-	CLCN1,FAM131B	-507,44889
chr15:93331941-93333035	chr15	+	93332655	93332889	True	NR_033769,NM_207446	chr15,chr15	+,-	ASB9P1,FAM174B	5824,-133624
chr10:120865628-120867006	chr10	+	120865907	120866918	True	NM_207009,NR_027141,NM_003750	chr10,chr10,chr10	+,+,-	FAM45A,FAM45B,EIF3A	-2347,-2329,-25573
chr8:32599248-32600477	chr8	+	32599497	32600471	True	NM_032664,NM_001159996	chr8,chr8	-,+	FUT10,NRG1	730244,-20197
chr11:67374683-67375144	chr11	+	67374753	67375097	True	NM_007103,NR_033791,NM_001166102	chr11,chr11,chr11	+,-,+	NDUFV1,DOC2GP,NDUFV1	-481,8088,-481
chr5:40755831-40756048	chr5	+	40755870	40756030	True	NM_012382,NM_000958	chr5,chr5	-,+	TTC33,PTGER4	92,-75890
chr13:108931928-108932302	chr13	+	108931938	108932341	True	NM_006573,NM_001098268	chr13,chr13	+,-	TNFSF13B,LIG4	-10020,-61222
chr1:176142573-176142978	chr1	+	176142787	176143021	True	NM_021936,NM_001001740	chr1,chr1	+,-	PAPPA2,RFWD2	289285,33399
chr5:782002-782437	chr5	+	782332	782472	True	NM_001166260,NM_024786	chr5,chr5	+,-	TRIP13,ZDHHC11	110496,68679
chr5:782002-782437	chr5	+	690273	690413	False	NM_018140,NM_007030	chr5,chr5	+,-	CEP72,TPPP	-77919,3147
chr1:244212952-244213182	chr1	+	244212952	244213210	True	NM_005465,NM_006352,NM_205768	chr1,chr1,chr1	-,+,+	AKT3,ZNF238,ZNF238	-206399,3371,1350
chr8:103567640-103569176	chr8	+	103567648	103569062	True	NM_024410,NM_001032282	chr8,chr8	+,-	ODF1,KLF10	-3851,97157
chr19:38398241-38399210	chr19	+	38398301	38399173	True	NM_031951,NM_015073	chr19,chr19	-,+	WDR87,SIPA1L3	-984,-484
chr21:44745602-44746071	chr21	+	44745791	44746097	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	123806,100955
chr18:49867952-49868313	chr18	+	49868073	49868289	True	NM_005215,NM_016626	chr18,chr18	+,-	DCC,MEX3C	-1582,-1144022
chrX:47858499-47859464	chrX	+	47858893	47859088	True	NM_001007088,NM_205856,NM_006962,NM_001178099,NM_001079900	chrX,chrX,chrX,chrX,chrX	-,+,-,-,+	ZNF182,SPACA5,ZNF182,ZNF182,SPACA5B	4349,4645,4349,4366,8081
chr10:133917769-133918100	chr10	+	133917808	133918078	True	NM_001105521,NM_004052	chr10,chr10	+,-	JAKMIP3,BNIP3	234,-122373
chr17:57973771-57975047	chr17	+	57973913	57974946	True	NM_001193611,NM_001193610,NM_001193613,NM_001193612,NM_001193609,NM_016261,NM_003161	chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,-,+	TUBD1,TUBD1,TUBD1,TUBD1,TUBD1,TUBD1,RPS6KB1	-3607,-3607,-3607,-3607,-3607,-3607,-3521
chr12:11324965-11326442	chr12	+	11325019	11326463	True	NR_036583,NR_037918	chr12,chr12	+,-	LOC100129361,PRH1-PRR4	-1294,-795
chr3:74519754-74520118	chr3	+	74519756	74519989	True	NR_031714,NM_020872	chr3,chr3	+,-	MIR1324,CNTN3	1159924,50417
chr12:58087306-58087530	chr12	+	58087370	58087568	True	NM_006812,NM_001017958,NM_001122772,NM_001017957,NM_001017956	chr12,chr12,chr12,chr12,chr12	+,+,-,+,+	OS9,OS9,AGAP2,OS9,OS9	169,169,44511,169,169
chr4:186456101-186456339	chr4	+	186456241	186456323	True	NM_001114357,NM_001114107,NM_014476	chr4,chr4,chr4	+,-,-	C4orf47,PDLIM3,PDLIM3	-105747,439,439
chr3:195163515-195163808	chr3	+	195163534	195163752	True	NM_012287,NR_003265	chr3,chr3	-,+	ACAP2,SDHAP2	115,221157
chr19:8643234-8643968	chr19	+	8643397	8643991	True	NM_012335,NM_031203	chr19,chr19	-,+	MYO1F,HNRNPM	-1066,-133645
chr2:134904304-134905279	chr2	+	134904495	134905321	True	NM_030923,NR_037450	chr2,chr2	-,+	TMEM163,MIR3679	571300,-19853
chr2:55457130-55458240	chr2	+	55457248	55458039	True	NM_152385,NM_002954,NM_001135592,NM_001177413,NM_001135598	chr2,chr2,chr2,chr2,chr2	-,+,+,+,-	C2orf63,RPS27A,RPS27A,RPS27A,C2orf63	1461,1501,999,1774,1711
chr1:160761185-160762749	chr1	+	160761476	160762597	True	NM_002348,NM_001166663,NM_001033667	chr1,chr1,chr1	+,-,+	LY9,CD244,LY9	3330,70154,3330
chr16:75242637-75243254	chr16	+	75242695	75243087	True	NM_001025200,NM_001906	chr16,chr16	-,+	CTRB2,CTRB1	-1623,9796
chr16:788493-789602	chr16	+	788936	789626	True	NM_032304,NM_022493	chr16,chr16	+,-	HAGHL,NARFL	-11729,1421
chr5:138862467-138863735	chr5	+	138862938	138863083	True	NM_198282,NM_003339	chr5,chr5	-,+	TMEM173,UBE2D2	-595,77667
chr14:89059886-89061121	chr14	+	89059911	89061159	True	NM_207662,NM_007039	chr14,chr14	+,-	ZC3H14,PTPN21	-84,-38788
chr11:34534291-34534540	chr11	+	34534321	34534531	True	NM_001422,NM_001752,NM_198381	chr11,chr11,chr11	-,+,-	ELF5,CAT,ELF5	849,-73900,-975
chr2:200783378-200783902	chr2	+	200783444	200783517	True	NM_001039693,NM_153689	chr2,chr2	-,+	C2orf60,C2orf69	36997,-7523
chr5:77047295-77048346	chr5	+	77047439	77048061	True	NM_003719,NM_004607	chr5,chr5	+,-	PDE8B,TBCA	-540784,24185
chr2:202647265-202647563	chr2	+	202647292	202647612	True	NM_001135745,NM_139158,NM_020919	chr2,chr2,chr2	-,+,-	ALS2,CDK15,ALS2	-1397,23585,-1397
chr19:5872725-5873718	chr19	+	5872880	5873614	True	NM_002034,NM_001017921	chr19,chr19	-,+	FUT5,VMAC	-2329,31237
chr10:102133824-102134619	chr10	+	102133937	102134461	True	NM_016112,NR_026762	chr10,chr10	-,+	PKD2L1,NCRNA00263	-43694,-656
chr7:99430149-99431378	chr7	+	99430607	99431421	True	NM_022820,NM_057095,NM_057096,NM_001005276	chr7,chr7,chr7,chr7	+,+,+,-	CYP3A43,CYP3A43,CYP3A43,OR2AE1	-5030,-5030,-5030,43285
chr5:81574406-81574850	chr5	+	81574410	81574742	True	NM_001017971,NM_001025	chr5,chr5	+,-	ATP6AP1L,RPS23	26423,-175
chr19:6109567-6109770	chr19	+	6109568	6109678	True	NM_000635,NM_030924,NM_134433	chr19,chr19,chr19	-,+,-	RFX2,ACSBG2,RFX2	1036,26031,1036
chr2:74754167-74755897	chr2	+	74754205	74755726	True	NM_133637,NM_181575,NM_145074,NM_013247	chr2,chr2,chr2,chr2	-,-,+,+	DQX1,AUP1,HTRA2,HTRA2	-797,1306,805,805
chr22:31092938-31094633	chr22	+	31093066	31094364	True	NM_152511,NM_030758	chr22,chr22	-,+	DUSP18,OSBP2	-29194,-2324
chr5:137057671-137058514	chr5	+	137057718	137058196	True	NM_017415,NR_002713	chr5,chr5	-,+	KLHL3,NPY6R	13633,78685
chr6:170628474-170629342	chr6	+	170628847	170629339	True	NM_032448,NM_005618	chr6,chr6	+,-	FAM120B,DLL1	-13054,-29150
chr16:2316602-2317188	chr4	-	11372815	11372865	True	NR_030298,NM_005114	chr4,chr4	+,-	MIR572,HS3ST1	-2415,57722
chr19:38183876-38184260	chr19	+	38183964	38184306	True	NM_001172226,NM_152605	chr19,chr19	+,-	ZNF540,ZNF781	-98284,-748
chr3:47824283-47825778	chr3	+	47824547	47825592	True	NM_014966,NM_003074	chr3,chr3	+,-	DHX30,SMARCC1	18806,-1142
chr5:140307023-140307688	chr5	+	140307154	140307678	True	NM_018898,NM_031882,NM_002109	chr5,chr5,chr5	+,+,-	PCDHAC1,PCDHAC1,HARS	-903,-903,-236183
chr5:85913027-85913586	chr5	+	85913026	85913599	True	NR_036243,NM_001867,NR_037402	chr5,chr5,chr5	-,+,+	MIR4280,COX7C,MIR3607	497222,184,2714
chr12:6663680-6663895	chr12	+	6663845	6663943	True	NM_001039670,NM_001193457,NM_080730,NR_036467,NM_002046	chr12,chr12,chr12,chr12,chr12	-,-,-,-,+	IFFO1,IFFO1,IFFO1,IFFO1,GAPDH	1356,1356,1356,1356,-20239
chr7:100464551-100464765	chr7	+	100464588	100464814	True	NM_001015072,NM_003302,NM_001128853,NM_001128852,NM_015908,NM_001128854	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,+,+	UFSP1,TRIP6,SRRT,SRRT,SRRT,SRRT	22575,135,7886,7886,7886,7886
chr10:99208103-99209376	chr10	+	99208161	99209169	True	NM_016046,NM_032327,NM_198043,NM_198045,NM_198044,NM_198046	chr10,chr10,chr10,chr10,chr10,chr10	-,+,+,+,+,+	EXOSC1,ZDHHC16,ZDHHC16,ZDHHC16,ZDHHC16,ZDHHC16	-2393,-2282,-2282,-2282,-2282,-2265
chr16:4551389-4553029	chr16	+	4551401	4552712	True	NM_020677,NM_001127205	chr16,chr16	-,+	NMRAL1,HMOX2	-26505,-5593
chr2:172017693-172018902	chr2	+	172017821	172018656	True	NM_012290,NM_015530	chr2,chr2	-,+	TLK1,GORASP2	-411,-232836
chr7:73149772-73150863	chr7	+	73149784	73150912	True	NM_148912,NM_148913,NR_026910,NR_026912,NR_026690,NM_001145364	chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,+,-	ABHD11,ABHD11,ABHD11,ABHD11,WBSCR26,ABHD11	2322,2322,2322,2328,-436,2322
chr3:38972891-38974493	chr3	+	38972893	38973503	True	NM_020839,NM_014139	chr3,chr3	+,-	WDR48,SCN11A	120003,18607
chr14:64755157-64755423	chr14	+	64755353	64755443	True	NM_182910,NM_001040275,NM_001437	chr14,chr14,chr14	+,-,-	SYNE2,ESR2,ESR2	-72739,5735,5735
chr11:64412083-64412526	chr11	+	64412299	64412525	True	NM_153378,NM_138734	chr11,chr11	+,-	SLC22A12,NRXN2	-54072,-1512
chr4:2200027-2200249	chr4	+	2200073	2200284	True	NM_181808,NM_178557	chr4,chr4	-,+	POLN,NAT8L	30724,-138892
chr7:28485462-28486130	chr7	+	28485512	28486020	True	NM_004904,NM_175061	chr7,chr7	+,-	CREB5,JAZF1	-10329,-265075
chr7:149472192-149472932	chr7	+	149472376	149472712	True	NM_207336,NM_198455	chr7,chr7	-,+	ZNF467,SSPO	-2081,418
chr11:18721628-18723335	chr11	+	18721847	18723327	True	NM_153347,NM_173588	chr11,chr11	+,-	TMEM86A,IGSF22	-1547,24500
chr1:151738474-151739319	chr1	+	151738590	151739346	True	NM_016178,NM_001134939,NM_031420	chr1,chr1,chr1	+,+,-	OAZ3,OAZ3,MRPL9	78,-3203,-2550
chr6:74227949-74228281	chr6	+	74227997	74228109	True	NM_001402,NM_133645	chr6,chr6	-,+	EEF1A1,MTO1	2696,-56606
chr4:100441292-100442930	chr4	+	100441743	100442941	True	NM_152292,NM_032149	chr4,chr4	-,+	RG9MTD2,C4orf17	41934,-9640
chr7:107529828-107531579	chr7	+	107530074	107531372	True	NM_000111,NM_000108	chr7,chr7	-,+	SLC26A3,DLD	-86396,213
chr5:59165420-59165778	chr5	+	59165432	59165799	True	NR_024617,NM_001104631	chr5,chr5	+,-	PART1,PDE4D	617740,23873
chr3:134093506-134093738	chr3	+	134093576	134093714	True	NM_001042383,NM_016201	chr3,chr3	+,-	CEP63,AMOTL2	110860,-170
chr1:157107368-157107812	chr1	+	157107384	157107716	True	NM_001145312,NR_001560,NM_005240	chr1,chr1,chr1	-,+,-	ETV3,CYCSP52,ETV3	717,-9281,511
chr5:3596869-3597371	chr5	+	3596905	3597321	True	NR_033898,NM_024337	chr5,chr5	-,+	LOC285577,IRX1	-60697,-788
chr4:2936658-2937132	chr4	+	2936671	2937169	True	NR_015453,NM_001120,NM_001146069	chr4,chr4,chr4	+,-,-	C4orf10,MFSD10,MFSD10	108,-707,-85
chr10:118302446-118302917	chr10	+	118302446	118302742	True	NM_000936,NM_144661	chr10,chr10	+,-	PNLIP,C10orf82	2685,126789
chr9:135906547-135906897	chr9	+	135906559	135906693	True	NM_001122823,NM_001162427,NM_012087	chr9,chr9,chr9	+,-,+	GTF3C5,TSC1,GTF3C5	-548,-86539,-548
chr19:45281520-45283021	chr19	+	45282276	45282790	True	NM_012116,NR_027754,NM_001130852	chr19,chr19,chr19	+,-,+	CBLC,CEACAM22P,CBLC	-1201,-222126,-1201
chr15:63418634-63419760	chr15	+	63418634	63419787	True	NM_032857,NM_015920,NM_171846	chr15,chr15,chr15	+,-,+	LACTB,RPS27L,LACTB	-4690,30004,-4690
chr6:158734298-158735281	chr6	+	158734378	158735278	True	NM_001007466,NM_020245,NM_032861	chr6,chr6,chr6	+,+,-	TULP4,TULP4,SERAC1	-738,-738,-145066
chr19:4305652-4306836	chr19	+	4305941	4306411	True	NM_024333,NM_001169126,NM_144615	chr19,chr19,chr19	+,-,-	FSD1,TMIGD2,TMIGD2	-1401,-3513,-3513
chr6:34541487-34542495	chr6	+	34541775	34542445	True	NM_001199583,NM_012391	chr6,chr6	+,-	PACSIN1,SPDEF	-59177,-17684
chr10:45646038-45646654	chr10	+	45646102	45646532	True	NR_033891,NR_024472	chr10,chr10	+,-	LOC338579,LOC100133308	3577,3562
chr3:128294452-128294854	chr3	+	128294606	128294814	True	NM_007354,NR_026954	chr3,chr3	-,+	C3orf27,LOC90246	165,-67979
chrX:147027487-147029084	chrX	+	147027744	147028569	True	NR_033700,NR_024503,NM_152578	chrX,chrX,chrX	+,-,+	FMR1,FMR1-AS1,FMR1NB	-34327,-24068,34279
chr9:97355266-97355850	chr9	+	97355317	97355767	True	NM_003837,NM_001193331	chr9,chr9	-,+	FBP2,C9orf3	358,133183
chr5:132392256-132394185	chr5	+	132392849	132393811	True	NM_017665,NM_002154	chr5,chr5	-,+	ZCCHC10,HSPA4	-30609,-5250
chr4:46377871-46379019	chr4	+	46377908	46378506	True	NM_001114175,NM_000812	chr4,chr4	-,+	GABRA2,GABRB1	12940,654788
chr11:122528154-122528656	chr11	+	122528293	122528607	True	NM_032873,NM_001098169	chr11,chr11	+,-	UBASH3B,BSX	-1950,323822
chrX:128702186-128703249	chrX	+	128702425	128703261	True	NM_139035,NM_001587	chrX,chrX	-,+	SMARCA1,OCRL	-44965,-28224
chr1:200861339-200861784	chr1	+	200861365	200861741	True	NM_001142569,NM_018265,NM_017596	chr1,chr1,chr1	+,+,-	C1orf106,C1orf106,KIF21B	2257,-786,131138
chr11:101977880-101979173	chr11	+	101978051	101978874	True	NM_001195045,NM_001195044,NM_001130145,NM_006106,NM_178127	chr11,chr11,chr11,chr11,chr11	+,+,+,+,-	YAP1,YAP1,YAP1,YAP1,ANGPTL5	4296,2317,2317,2317,-190798
chr1:166129555-166130219	chr1	+	166129560	166130198	True	NM_001017961,NR_030626,NR_037431	chr1,chr1,chr1	-,-,+	FAM78B,MIR921,MIR3658	5810,-5525,-252453
chrX:20285234-20285499	chrX	+	20285288	20285466	True	NM_001173456,NM_004586	chrX,chrX	+,-	PDHA1,RPS6KA3	-923328,-538
chr6:3076312-3076730	chr6	+	3076325	3076603	True	NR_033884,NM_003804	chr6,chr6	-,+	LOC401233,RIPK1	-51320,454
chr16:50059862-50060739	chr16	+	50059882	50060399	True	NM_153261,NM_015069	chr16,chr16	+,-	TMEM188,ZNF423	-744,-198964
chr11:61978553-61979165	chr11	+	61978689	61979215	True	NM_206998,NM_002407	chr11,chr11	-,+	SCGB1D4,SCGB2A1	87376,-2613
chr19:49527828-49528724	chr19	+	49528055	49528773	True	NM_000894,NM_000737,NM_033378,NR_024244	chr19,chr19,chr19,chr19	-,-,+,-	LHB,CGB,CGB2,SNAR-G2	-7708,-462,6356,6321
chr19:49527828-49528724	chr19	-	49533542	49534251	False	NR_024244,NM_033378,NM_033377,NR_004383,NM_000737	chr19,chr19,chr19,chr19,chr19	-,+,-,+,-	SNAR-G2,CGB2,CGB1,SNAR-G1,CGB	843,878,5990,6025,-5949
chr19:49527828-49528724	chr19	-	49546101	49546151	False	NR_004383,NM_033183,NM_033377,NM_033043	chr19,chr19,chr19,chr19	+,-,-,+	SNAR-G1,CGB8,CGB1,CGB5	-5875,6267,-5910,950
chr19:49527828-49528724	chr19	+	49541081	49541469	False	NR_004383,NM_033378,NM_033377,NR_024244,NM_033043	chr19,chr19,chr19,chr19,chr19	+,+,-,-,+	SNAR-G1,CGB2,CGB1,SNAR-G2,CGB5	-855,-6002,-890,-6037,5632
chr1:31537200-31537808	chr1	+	31537452	31537831	True	NM_001020658,NM_014676,NR_002762	chr1,chr1,chr1	-,-,+	PUM1,PUM1,PRO0611	783,783,-76599
chr8:27337568-27338844	chr8	+	27337578	27338595	True	NM_001979,NM_000742	chr8,chr8	+,-	EPHX2,CHRNA2	10049,-765
chr1:160117823-160118211	chr1	+	160117973	160118165	True	NM_144699,NM_052868	chr1,chr1	+,-	ATP1A4,IGSF8	3186,-49565
chr6:10059500-10060057	chr6	+	10059632	10060110	True	NM_001032280,NR_033910	chr6,chr6	-,+	TFAP2A,LOC100130275	352553,352440
chr12:52401163-52401446	chr12	+	52401196	52401264	True	NM_181711,NM_001013690	chr12,chr12	+,-	GRASP,FIGNL2	-499,-175495
chrX:138634450-138635827	chrX	+	138634558	138635693	True	NM_000133,NM_001171877	chrX,chrX	+,-	F9,MCF2	-21714,89357
chr4:88451094-88451344	chr4	+	88451093	88451362	True	NM_014208,NM_004684,NM_001128310	chr4,chr4,chr4	+,-,-	DSPP,SPARCL1,SPARCL1	78318,-438,-438
chr15:72101387-72101670	chr15	+	72101479	72101659	True	NM_014249,NM_016346,NM_006901	chr15,chr15,chr15	+,+,-	NR2E3,NR2E3,MYO9A	1234,1234,308813
chr9:116173052-116173669	chr9	+	116173086	116173495	True	NM_017443,NR_027261,NM_152786,NM_000031	chr9,chr9,chr9,chr9	-,-,+,-	POLE3,POLE3,C9orf43,ALAD	-57,-131,-116,-9468
chr19:4128418-4128975	chr19	+	4128682	4128752	True	NM_030662,NM_032607	chr19,chr19	-,+	MAP2K2,CREB3L3	-4556,24876
chr15:66086239-66086952	chr15	+	66086344	66086873	True	NM_004663,NM_005848,NM_001144823	chr15,chr15,chr15	+,-,-	RAB11A,DENND4A,DENND4A	74922,-1713,-1713
chr19:7742684-7743537	chr19	+	7742721	7743515	True	NM_001042461,NM_001193374,NM_174894,NM_174918,NM_002002,NM_020415,NM_001042462	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,-,+,+	TRAPPC5,RETN,TRAPPC5,C19orf59,FCER2,RETN,TRAPPC5	2248,-8800,2245,-829,23567,-8800,2191
chr9:117260452-117262016	chr9	+	117260464	117261951	True	NM_001083885,NM_004888,NM_001173425,NM_015404	chr9,chr9,chr9,chr9	-,+,-,-	DFNB31,ATP6V1G1,DFNB31,DFNB31	3594,88042,5835,5835
chr3:152552922-152553368	chr3	+	152552950	152553350	True	NM_002563,NM_001123228	chr3,chr3	+,-	P2RY1,TMEM14E	-265,-494171
chrX:43741302-43741642	chrX	+	43741325	43741631	True	NM_000898,NM_000240	chrX,chrX	-,+	MAOB,MAOA	140,-225967
chr17:651673-653601	chr17	+	651673	653589	True	NM_015721,NR_024120	chr17,chr17	-,+	GEMIN4,DBIL5P	1962,2310
chr22:18045469-18046591	chr22	+	18045771	18046571	True	NM_031481,NM_001039366	chr22,chr22	+,-	SLC25A18,ATP6V1E1	-2639,65067
chr19:55575510-55576139	chr19	+	55575795	55575890	True	NR_027382,NM_001145971,NR_027381,NM_138412,NM_133180	chr19,chr19,chr19,chr19,chr19	-,-,-,-,+	RDH13,RDH13,RDH13,RDH13,EPS8L1	-1210,-1210,-1210,5081,11330
chr3:146261763-146261989	chr3	+	146261766	146261918	True	NM_003412,NM_021105	chr3,chr3	+,-	ZIC1,PLSCR1	865262,760
chr7:1500667-1501178	chr7	+	1500784	1501226	True	NM_002360,NM_182924	chr7,chr7	+,-	MAFK,MICALL2	69141,-1675
chr14:53160271-53161796	chr14	+	53160781	53161643	True	NM_002806,NM_014584	chr14,chr14	+,-	PSMC6,ERO1L	12252,826
chr10:50318247-50319439	chr10	+	50318263	50319323	True	NM_144984,NM_001135196,NM_001031746	chr10,chr10,chr10	-,+,-	C10orf72,C10orf71,C10orf72	4288,187863,4288
chr5:10592656-10593787	chr5	+	10592889	10593645	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-28505,167792
chr7:116166601-116168276	chr7	+	116166681	116168291	True	NR_002330,NM_001753,NM_001172896,NM_001172897,NM_001172895	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	ST7OT1,CAV1,CAV1,CAV1,CAV1	426147,-1893,-385,-320,-1669
chr5:308266-308492	chr5	+	308275	308477	True	NM_020731,NM_145265	chr5,chr5	+,-	AHRR,CCDC127	-4035,-89978
chr8:145693462-145693743	chr8	+	145693570	145693774	True	NM_032687,NM_138496,NM_145754,NM_003923,NM_001129888	chr8,chr8,chr8,chr8,chr8	-,-,+,-,-	CYHR1,CYHR1,KIFC2,FOXH1,CYHR1	-2721,-3152,-1883,7994,-2539
chr1:228762367-228762734	chr1	+	228762719	228762783	True	NR_037962,NM_033445	chr1,chr1	+,-	RHOU,HIST3H2A	17610,-117159
chr1:228762367-228762734	chr1	+	228753803	228753867	False	NR_037962,NM_033445	chr1,chr1	+,-	RHOU,HIST3H2A	26526,-108243
chr5:176731018-176731543	chr5	+	176731047	176731525	True	NM_130781,NM_001142935,NM_013237,NM_031300,NM_001031677	chr5,chr5,chr5,chr5,chr5	-,-,+,-,-	RAB24,MXD3,PRELID1,MXD3,RAB24	-303,7817,-263,7817,-303
chr5:150536168-150536725	chr5	+	150536176	150536746	True	NM_000405,NM_001155	chr5,chr5	+,-	GM2A,ANXA6	95866,747
chr4:83545105-83546527	chr4	+	83545297	83546418	True	NR_024088,NM_021204,NR_024087	chr4,chr4,chr4	-,+,-	C4orf11,ENOPH1,C4orf11	-2707,-193622,-2707
chrX:18707775-18707998	chrX	+	18707836	18708040	True	NM_000330,NM_152224,NM_152226,NM_006240	chrX,chrX,chrX,chrX	-,+,+,+	RS1,PPEF1,PPEF1,PPEF1	-17613,1004,1004,1004
chr4:41751796-41752291	chr4	+	41751804	41752293	True	NM_001112720,NM_003924	chr4,chr4	+,-	LIMCH1,PHOX2B	-136936,-817
chr5:140057746-140058283	chr5	+	140057751	140058151	True	NM_012208,NM_194249	chr5,chr5	+,-	HARS2,DND1	12866,-4580
chr7:16838092-16838812	chr7	+	16838224	16838854	True	NM_006408,NM_014399	chr7,chr7	-,+	AGR2,TSPAN13	5934,-44924
chr11:56947632-56948883	chr11	+	56947714	56948902	True	NM_001005210,NM_005161	chr11,chr11	+,-	LRRC55,APLNR	318,56075
chr3:158448926-158449575	chr3	+	158449060	158449488	True	NM_206963,NM_002888,NM_001167903	chr3,chr3,chr3	-,-,+	RARRES1,RARRES1,MFSD1	837,837,70226
chr5:96464631-96466169	chr5	+	96464650	96466182	True	NM_153234,NM_175920	chr5,chr5	-,+	LIX1,LNPEP	12388,-170552
chr1:153931393-153931892	chr1	+	153931392	153931854	True	NM_014437,NM_130898,NM_181715	chr1,chr1,chr1	-,+,-	SLC39A1,CREB3L4,CRTC2	8384,8542,-260
chr16:2582227-2582703	chr16	+	2582576	2582752	True	NM_001048212,NR_036139,NM_031268,NM_002613	chr16,chr16,chr16,chr16	-,-,+,+	CEMP1,MIR3178,PDPK1,PDPK1	-1167,-570,5217,5217
chr21:44393129-44393608	chr21	+	44393149	44393561	True	NM_004571,NM_018669	chr21,chr21	+,-	PKNOX1,WDR4	1081,-93471
chr15:97302495-97303467	chr15	+	97302500	97303480	True	NM_173499,NR_024172	chr15,chr15	+,-	SPATA8,LOC91948	23198,1114235
chr5:80596084-80597141	chr5	+	80596264	80597172	True	NM_032280,NR_034122,NR_034123,NR_034121,NM_001131035,NM_001131036	chr5,chr5,chr5,chr5,chr5,chr5	+,-,-,-,+,+	ZCCHC9,LOC100131067,LOC100131067,LOC100131067,ZCCHC9,ZCCHC9	229,272,272,272,229,229
chr15:91478975-91479551	chr15	+	91479146	91479584	True	NM_018671,NM_198527,NM_001039675	chr15,chr15,chr15	+,-,+	UNC45A,HDDC3,UNC45A	-983,-3372,-5788
chr1:39544133-39544785	chr1	+	39544135	39544791	True	NM_017821,NM_012090	chr1,chr1	-,+	RHBDL2,MACF1	-136679,2297
chr11:94036728-94037782	chr11	+	94036739	94037660	True	NM_001199206,NM_016540	chr11,chr11	+,-	FOLR4,GPR83	1142,96981
chr4:9533495-9533765	chr4	+	9533682	9533814	True	NR_031688,NM_001040448	chr4,chr4	-,+	MIR548I2,DEFB131	24173,-87473
chr1:219652471-219653706	chr1	+	219652515	219653602	True	NM_138794,NM_018713	chr1,chr1	+,-	LYPLAL1,SLC30A10	-305374,448448
chr3:66554305-66554937	chr3	+	66554384	66554765	True	NR_028475,NM_015541	chr3,chr3	+,-	SLC25A26,LRIG1	-283270,-3539
chr12:10121207-10122294	chr12	+	10121217	10122254	True	NM_201623,NM_138337,NM_001099431	chr12,chr12,chr12	+,+,-	CLEC12A,CLEC12A,CLEC1B	1753,1753,29697
chr1:225972244-225973475	chr1	+	225972561	225972796	True	NM_003133,NM_001130440,NM_014698	chr1,chr1,chr1	+,+,-	SRP9,SRP9,TMEM63A	-7101,-7101,97674
chr3:52322162-52322384	chr3	+	52322162	52322238	True	NM_001144951,NR_029677,NM_025222,NR_026701,NR_026700,NR_026702,NM_145262,NR_026699	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,-,-,+,+,+,+,+	GLYCTK,MIR135A1,WDR82,GLYCTK,GLYCTK,GLYCTK,GLYCTK,GLYCTK	-377,6144,-9503,-377,-377,-377,-377,-377
chr1:202830907-202831201	chr1	+	202830990	202831250	True	NM_002871,NR_002929	chr1,chr1	-,+	RABIF,LOC148709	27063,-160
chr15:62352726-62352955	chr15	+	62352730	62352956	True	NM_017684,NM_001018088,NM_018080,NM_020821,NM_207322	chr15,chr15,chr15,chr15,chr15	-,-,-,-,+	VPS13C,VPS13C,VPS13C,VPS13C,C2CD4A	-66,-66,-66,-66,6219
chr19:58428180-58429931	chr19	+	58428544	58429800	True	NM_032828,NM_152475	chr19,chr19	+,-	ZNF587,ZNF417	-67415,-566
chr19:58428180-58429931	chr19	-	58330252	58330540	False	NR_024162,NM_001204818,NM_024762	chr19,chr19,chr19	-,+,-	FKBP1AP1,LOC100293516,ZNF552	8341,11121,-3971
chr4:5894859-5896273	chr4	+	5895118	5896078	True	NM_001313,NM_153717,NM_001014809	chr4,chr4,chr4	-,+,-	CRMP1,EVC,CRMP1	-4803,-182245,-333
chr22:51203355-51203957	chr22	+	51203550	51203984	True	NM_001003789,NR_026981	chr22,chr22	-,+	RABL2B,RPL23AP82	18161,-8089
chr22:51203355-51203957	chr2	-	114402917	114403351	False	NR_024531,NM_013412	chr2,chr2	-,+	RPL23AP7,RABL2A	-18202,-18159
chr6:692757-693045	chr6	+	692875	693085	True	NM_018303,NR_036585	chr6,chr6	-,+	EXOC2,IRF4	74,-301187
chr1:111150382-111150658	chr1	+	111150384	111150576	True	NM_004974,NR_003599	chr1,chr1	-,+	KCNA2,CYMP	-1409,-127047
chr5:140772857-140773097	chr5	+	140773008	140773146	True	NM_018925,NM_018921,NM_003736,NM_032099,NM_032098,NM_032088,NM_032089,NM_005642,NM_014004	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,+,-,+	PCDHGB5,PCDHGA9,PCDHGB4,PCDHGB5,PCDHGB4,PCDHGA8,PCDHGA9,TAF7,PCDHGA8	4548,9373,-5607,4548,-5607,-1576,9373,-72657,-1576
chr6:110678272-110678909	chr6	+	110678371	110678887	True	NM_001123364,NM_015891	chr6,chr6	-,+	C6orf186,CDC40	638,-176798
chr22:38244836-38245084	chr22	+	38244865	38245005	True	NR_030395,NM_138797,NM_016091,NR_030396,NR_036556	chr22,chr22,chr22,chr22,chr22	-,-,+,-,-	MIR658,ANKRD54,EIF3L,MIR659,ANKRD54	-4487,-4512,364,-1084,-4512
chr3:195163029-195163260	chr3	+	195163042	195163108	True	NM_012287,NR_003265	chr3,chr3	-,+	ACAP2,SDHAP2	759,221801
chr3:13920073-13920369	chr3	+	13920253	13920397	True	NM_004625,NR_036481	chr3,chr3	-,+	WNT7A,LOC100132526	1271,54155
chr22:17516232-17516949	chr22	+	17516272	17516907	True	NM_001037814,NR_015352	chr22,chr22	-,+	GAB4,CECR7	-27160,552
chr17:1552171-1552384	chr17	+	1552182	1552318	True	NM_001163673,NR_028075,NM_031430,NR_028076,NM_145352,NM_145350,NM_003693	chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,-,-,-,-	WDR81,SCARF1,RILP,SCARF1,SCARF1,SCARF1,SCARF1	67498,-3141,1124,-3141,-3141,-3141,-3141
chr20:62602926-62603656	chr20	+	62603129	62603633	True	NM_080621,NM_012469,NM_020713	chr20,chr20,chr20	-,+,-	SAMD10,PRPF6,ZNF512B	7412,8797,-1911
chr1:1980324-1980710	chr1	+	1980625	1980685	True	NM_002744,NM_001080484	chr1,chr1	+,-	PRKCZ,KIAA1751	1223,-45349
chr7:137487476-137488665	chr7	+	137487532	137488688	True	NM_004717,NM_001190906	chr7,chr7	-,+	DGKI,AKR1D1	42981,272489
chr5:1296740-1297900	chr5	+	1296782	1297740	True	NM_182632,NM_001193376,NM_198253	chr5,chr5,chr5	+,-,-	SLC6A18,TERT,TERT	-71377,-1620,-1620
chr22:42229963-42231473	chr22	+	42230117	42231067	True	NM_004599,NM_052945	chr22,chr22	+,-	SREBF2,TNFRSF13C	-1062,91804
chr4:6715586-6715888	chr4	+	6715585	6715704	True	NM_203462,NM_018366	chr4,chr4	-,+	MRFAP1L1,CNO	-3979,2137
chr20:32271111-32272533	chr20	+	32271704	32272393	True	NM_001024675,NM_005225,NM_031232,NM_031231	chr20,chr20,chr20,chr20	+,-,-,-	C20orf134,E2F1,NECAB3,NECAB3	-17458,1867,-9440,-9440
chr2:191037763-191038777	chr2	+	191037927	191038428	True	NM_001042519,NM_005259,NM_032321	chr2,chr2,chr2	+,-,+	C2orf88,MSTN,C2orf88	7160,-110472,7252
chr18:44560666-44561054	chr18	+	44560666	44561068	True	NM_145653,NM_001100817,NM_016427,NM_031303	chr18,chr18,chr18,chr18	-,-,-,+	TCEB3C,TCEB3CL,TCEB3B,KATNAL2	-4217,-4453,970,-33930
chr4:89303457-89304769	chr4	+	89303508	89304639	True	NM_017912,NM_001165136,NM_152542	chr4,chr4,chr4	+,+,-	HERC6,HERC6,PPM1K	-3668,-3668,-97620
chr7:8296940-8298715	chr7	+	8297104	8298732	True	NM_004968,NM_152745,NM_022307,NM_001136020	chr7,chr7,chr7,chr7	-,+,-,-	ICA1,NXPH1,ICA1,ICA1	3503,174852,3000,3098
chr2:231898844-231900704	chr2	+	231899140	231900219	True	NR_033879,NM_001144994	chr2,chr2	-,+	LOC348761,C2orf72	-38393,2061
chr19:38895649-38896265	chr19	+	38895858	38896266	True	NM_152657,NM_174905	chr19,chr19	-,+	GGN,FAM98C	-17190,-2134
chr11:5542849-5543259	chr11	+	5542897	5543164	True	NM_001005163,NM_145053	chr11,chr11	+,-	OR52D1,UBQLNL	-33033,-4941
chr13:44946121-44946902	chr13	+	44946183	44946806	True	NM_001010897,NM_006022	chr13,chr13	+,-	SERP2,TSC22D1	1171,64223
chr11:124766558-124766870	chr11	+	124766719	124766899	True	NM_019055,NM_001037558	chr11,chr11	-,+	ROBO4,HEPN1	982,22246
chr22:39881164-39882271	chr22	+	39881198	39881900	True	NM_001098270,NM_194326	chr22,chr22	+,-	MGAT3,RPS19BP1	1328,47024
chr9:95896989-95897462	chr9	+	95897002	95897412	True	NM_004148,NM_032310	chr9,chr9	-,+	NINJ1,C9orf89	-432,-38603
chr6:153444457-153444887	chr6	+	153444479	153444901	True	NM_194435,NM_012419	chr6,chr6	+,-	VIP,RGS17	-372608,7538
chr2:99956124-99956837	chr2	+	99956123	99956878	True	NM_015904,NM_005783	chr2,chr2	+,-	EIF5B,TXNDC9	-2344,-3263
chr5:63462306-63463036	chr5	+	63462307	63463054	True	NM_000524,NM_178532,NM_001113561	chr5,chr5,chr5	-,+,+	HTR1A,RNF180,RNF180	-204761,-687,-687
chr20:1633823-1634605	chr20	+	1633822	1634588	True	NM_018556,NM_080816,NM_001039508,NM_001040022	chr20,chr20,chr20,chr20	-,-,-,+	SIRPG,SIRPG,SIRPG,SIRPA	3905,3905,3905,240224
chrX:102934153-102934833	chrX	+	102934469	102934682	True	NM_001142419,NM_001142418,NM_012286,NM_001142432,NM_001142421,NM_001142431,NM_001142420,NM_001142430,NM_001142422,NM_001142423,NM_001142424,NM_001142425,NM_001142426,NM_001142427,NM_001142428,NM_001142429,NM_182541	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,+	MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,TMEM31	8459,7119,7119,8459,8459,8459,8459,7119,8459,7119,7119,7119,7119,8459,8459,7119,31154
chr17:39323967-39325532	chr17	+	39324060	39325445	True	NM_033062,NM_001190460,NM_032524,NM_033187	chr17,chr17,chr17,chr17	-,+,-,-	KRTAP4-2,KRTAP9-1,KRTAP4-4,KRTAP4-3	9074,20693,-7077,-38
chr3:132758311-132758857	chr3	+	132758355	132758892	True	NM_153240,NM_023943,NM_001136469	chr3,chr3,chr3	-,+,+	NPHP3,TMEM108,TMEM108	-317052,-1235,-1235
chr22:46374329-46374611	chr22	+	46374526	46374642	True	NM_058238,NR_027240	chr22,chr22	-,+	WNT7B,LOC730668	-1518,27853
chr8:38244149-38244503	chr8	+	38244149	38244547	True	NM_017778,NM_001199660,NM_023034,NM_001199659,NM_144652	chr8,chr8,chr8,chr8,chr8	-,+,-,+,+	WHSC1L1,LETM2,WHSC1L1,LETM2,LETM2	-4359,101,-4359,-241,-241
chr10:48418997-48419393	chr10	+	48418997	48419407	True	NM_016204,NM_153034	chr10,chr10	-,+	GDF2,ZNF488	-2144,-63971
chr16:2066009-2066631	chr16	+	2066057	2066613	True	NM_178167,NM_001099456	chr16,chr16	-,+	ZNF598,NPW	-6294,2907
chr1:186349687-186350618	chr1	+	186349780	186350458	True	NM_017847,NM_001164245,NM_001164246,NM_003292	chr1,chr1,chr1,chr1	+,+,+,-	C1orf27,C1orf27,C1orf27,TPR	-4946,-4946,-4946,-5323
chr19:55769479-55769867	chr19	+	55769522	55769618	True	NM_032430,NM_014931	chr19,chr19	+,-	BRSK1,PPP6R1	25915,470
chr1:32669844-32670693	chr1	+	32669938	32670506	True	NM_001160042,NM_018134,NM_001099434,NM_024296,NM_019118	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	IQCC,IQCC,DCDC2B,CCDC28B,TMEM234	729,729,4188,-3787,17471
chr9:36189409-36190501	chr9	+	36189422	36190369	True	NM_001190383,NM_001184761,NM_001184760,NM_007096,NM_001076677,NM_001184762,NM_001833	chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,+,+,+,+,+,+	GNE,CLTA,CLTA,CLTA,CLTA,CLTA,CLTA	68184,483,483,483,483,483,483
chr17:9930366-9931513	chr17	+	9930456	9931092	True	NM_004246,NM_201432,NM_001130831	chr17,chr17,chr17	+,-,-	GLP2R,GAS7,GAS7	-201126,9022,-833
chr7:53823691-53824955	chr7	+	53823802	53824960	True	NM_182595,NR_004422	chr7,chr7	+,-	POM121L12,HPVC1	-720513,445206
chr2:237176345-237176776	chr2	+	237176350	237176814	True	NM_020311,NM_212556	chr2,chr2	+,-	CXCR7,ASB18	301565,-3362
chr14:89884848-89885116	chr14	+	89884948	89885110	True	NR_036500,NM_005197	chr14,chr14	+,-	LOC400236,FOXN3	-1302,-1494
chr2:62115921-62116249	chr2	+	62115927	62116003	True	NM_006430,NM_152516	chr2,chr2	-,+	CCT4,COMMD1	-136,16799
chr7:45026595-45027083	chr7	+	45026597	45026884	True	NR_002952,NR_003697,NM_033054,NR_030770	chr7,chr7,chr7,chr7	-,-,-,+	SNORA9,C7orf40,MYO1G,CCM2	-1488,-338,-7893,12460
chr1:110053095-110055072	chr1	+	110053168	110054475	True	NM_182580,NM_020703	chr1,chr1	+,-	CYB561D1,AMIGO1	-16525,-832
chr2:167271087-167272951	chr2	+	167271094	167272695	True	NM_001079810,NM_002977	chr2,chr2	+,-	XIRP2,SCN9A	472301,-38597
chr19:21106389-21106745	chr19	+	21106448	21106514	True	NM_003429,NR_034060,NM_145297	chr19,chr19,chr19	+,+,-	ZNF85,ZNF85,ZNF626	-440,-440,-262046
chr7:86780873-86781639	chr7	+	86780913	86781669	True	NR_024549,NR_024550,NM_024315,NM_021145,NM_001142327,NM_001142326	chr7,chr7,chr7,chr7,chr7,chr7	+,+,-,+,+,+	DMTF1,DMTF1,C7orf23,DMTF1,DMTF1,DMTF1	7,7,67412,200,7,7
chr8:30601320-30601615	chr8	+	30601349	30601615	True	NM_005671,NM_001195104	chr8,chr8	+,-	UBXN8,GSR	74,-15863
chr2:152142976-152144864	chr2	+	152143065	152144842	True	NM_004688,NM_007115	chr2,chr2	-,+	NMI,TNFAIP6	1639,69263
chrX:150885558-150885768	chrX	+	150885558	150885750	True	NR_029973,NM_033085	chrX,chrX	-,+	MIR452,FATE1	242484,-1102
chr12:50617793-50619493	chr12	+	50617887	50619151	True	NM_032901,NM_001113547,NR_031625	chr12,chr12,chr12	+,-,-	C12orf62,LIMA1,MIR1293	-112039,-1399,8902
chr16:30065059-30065563	chr16	+	30065144	30065215	True	NM_000034,NM_031478	chr16,chr16	+,-	ALDOA,FAM57B	-709,-22958
chr9:104292610-104294353	chr9	+	104292965	104294128	True	NM_019592,NM_032342	chr9,chr9	+,-	RNF20,C9orf125	2004,-43490
chr7:5254007-5254406	chr7	+	5254112	5254324	True	NM_001033520,NR_034163	chr7,chr7	+,-	WIPI2,ZNF890P	-263,-69935
chr6:10584312-10586109	chr6	+	10584551	10586157	True	NM_001145020,NM_145655	chr6,chr6	-,+	C6orf52,GCNT2	108732,-93
chr19:51379148-51380094	chr19	+	51379431	51379889	True	NR_002948,NM_005551,NM_001002231	chr19,chr19,chr19	-,+,+	KLKP1,KLK2,KLK2	19815,-2800,-2800
chr3:112005510-112006614	chr3	+	112005535	112006468	True	NM_183061,NM_001004196	chr3,chr3	-,+	SLC9A10,CD200	6656,45447
chr7:80258476-80260016	chr7	+	80258530	80259916	True	NM_000072,NM_001001548,NM_001102386	chr7,chr7,chr7	+,+,-	CD36,CD36,GNAT3	7915,7915,-117288
chr5:140801566-140802231	chr5	+	140801569	140802167	True	NM_032091,NM_032090,NM_018927,NM_032092,NM_032094,NM_032101,NM_005642,NM_018914,NM_018913,NM_003735,NR_001297	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,-,+,+,+,+	PCDHGA11,PCDHGA10,PCDHGB7,PCDHGA11,PCDHGA12,PCDHGB7,TAF7,PCDHGA11,PCDHGA10,PCDHGA12,PCDHGB8P	-1083,-8877,-4360,-1083,7990,-4406,-101218,-1083,-8877,7990,3685
chr9:13172679-13173421	chr9	+	13172735	13173447	True	NM_203403,NM_003829	chr9,chr9	+,-	C9orf150,MPDZ	-397779,76968
chr11:67212605-67212863	chr11	+	67212609	67212877	True	NM_020441,NM_145200,NM_206997,NM_001018070,NM_005608	chr11,chr11,chr11,chr11,chr11	-,+,-,-,-	CORO1B,CABP4,GPR152,CORO1B,PTPRCAP	-1626,9940,7373,-1346,-7456
chr1:112947393-112948078	chr1	+	112947816	112947935	True	NM_018704,NR_036210	chr1,chr1	+,-	CTTNBP2NL,MIR4256	-9077,56577
chr1:155035386-155035689	chr1	+	155035601	155035671	True	NM_182689,NM_144622,NM_182690,NM_005227	chr1,chr1,chr1,chr1	+,-,+,+	EFNA4,DCST2,EFNA4,EFNA4	541,-29344,541,541
chr6:49805170-49805781	chr6	+	49805361	49805818	True	NM_001145652,NM_001131	chr6,chr6	+,-	C6orf141,CRISP1	-287299,28451
chr4:5055628-5055929	chr4	+	5055733	5055893	True	NM_018659,NM_018401	chr4,chr4	-,+	CYTL1,STK32B	-34536,-2258
chr1:178306957-178307557	chr1	+	178307154	178307609	True	NM_004841,NR_027982	chr1,chr1	+,-	RASAL2,LOC100302401	2996,-244026
chr11:46406712-46406925	chr11	+	46406716	46406948	True	NM_000741,NM_002391,NM_001012334,NM_001012333	chr11,chr11,chr11,chr11	-,+,+,+	CHRM4,MDK,MDK,MDK	1209,-3548,-4149,-3464
chr1:185013487-185014239	chr1	+	185013660	185014274	True	NM_052966,NM_007212	chr1,chr1	-,+	FAM129A,RNF2	-69978,276
chr17:29231989-29232258	chr17	+	29232063	29232132	True	NM_024683,NM_018404	chr17,chr17	-,+	C17orf42,ADAP2	1211,16621
chr17:58158470-58159195	chr17	+	58158469	58159096	True	NM_000717,NR_030732,NM_022070	chr17,chr17,chr17	+,-,-	CA4,LOC645638,HEATR6	68205,6783,-2177
chr19:18314898-18315223	chr19	+	18314902	18315182	True	NM_002866,NM_032683	chr19,chr19	-,+	RAB3A,MPV17L2	-28,-10913
chr3:63422711-63424095	chr3	+	63422977	63423764	True	NM_025075,NM_144642	chr3,chr3	-,+	THOC7,SYNPR	425883,4988
chr1:169703334-169703974	chr1	+	169703376	169703766	True	NM_000450,NM_018186	chr1,chr1	-,+	SELE,C1orf112	-156,60783
chr19:53327635-53328906	chr19	+	53327941	53328535	True	NR_036599,NR_036600,NM_152473,NM_006969	chr19,chr19,chr19,chr19	-,-,+,-	ZNF28,ZNF28,HERV-V1,ZNF28	-3019,-3019,188808,-3019
chr17:78965140-78965440	chr17	+	78965235	78965477	True	NR_026857,NM_024591	chr17,chr17	-,+	FLJ90757,CHMP6	43092,163
chrX:7064489-7065326	chrX	+	7064560	7065220	True	NM_012080,NM_001135565,NM_000351,NM_001178136,NM_001178135	chrX,chrX,chrX,chrX,chrX	-,-,+,-,-	HDHD1,HDHD1,STS,HDHD1,HDHD1	1061,1061,72251,1061,1061
chr3:40518357-40518593	chr3	+	40518502	40518588	True	NM_001145083,NM_001145082,NR_033965,NM_001145093,NR_026746	chr3,chr3,chr3,chr3,chr3	+,+,-,+,+	ZNF619,ZNF619,FLJ33065,ZNF619,ZNF619	44,15,-167313,15,15
chr17:73761427-73761629	chr17	+	73761460	73761652	True	NM_000154,NM_001080419	chr17,chr17	-,+	GALK1,UNK	-180,19028
chr11:64887026-64887614	chr11	+	64887238	64887621	True	NM_001997,NR_037568,NR_037567,NM_014205,NM_003273,NM_004927	chr11,chr11,chr11,chr11,chr11,chr11	-,+,+,-,+,+	FAU,MRPL49,MRPL49,ZNHIT2,TM7SF2,MRPL49	2102,2094,2033,-2068,-7955,2094
chr5:72682564-72683907	chr5	+	72682607	72683842	True	NM_004472,NM_001037637	chr5,chr5	-,+	FOXD1,BTF3	60560,110407
chr7:194416-195591	chr7	+	194441	195367	True	NM_002607,NM_020223	chr7,chr7	-,+	PDGFA,FAM20C	364164,-1523
chrY:14454209-14454498	chrY	+	14454208	14454471	True	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	319826,78977
chr6:43600477-43601605	chr6	+	43600855	43601310	True	NM_014628,NM_001003690,NM_019096	chr6,chr6,chr6	+,+,-	MAD2L1BP,MAD2L1BP,GTPBP2	2266,-3636,-3919
chr15:78232369-78233661	chr15	+	78232402	78233388	True	NM_001101404,NR_027024	chr15,chr15	+,-	SH2D7,LOC645752	151538,-13214
chr1:202138518-202138735	chr1	+	202138541	202138693	True	NR_002930,NR_037663,NR_037664,NM_001199797,NM_080588,NM_002832	chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,-,-,-	PTPRVP,PTPN7,PTPN7,PTPN7,PTPN7,PTPN7	-1413,-7825,-7825,-7825,-9422,-7825
chr8:79459498-79460725	chr8	+	79459791	79460767	True	NM_000880,NM_181839	chr8,chr8	-,+	IL7,PKIA	257043,-31516
chr15:43590873-43592719	chr15	+	43591435	43592657	True	NM_001012969,NM_052955	chr15,chr15	+,-	ADAL,TGM7	30214,1852
chr17:61697067-61698219	chr17	+	61697066	61698093	True	NM_002401,NM_203351,NM_030576	chr17,chr17,chr17	+,+,-	MAP3K3,MAP3K3,LIMD2	1707,1707,79479
chr1:51579075-51580249	chr1	+	51579182	51580023	True	NM_001136508,NM_007051	chr1,chr1	+,-	C1orf185,FAF1	-11327,-153246
chr1:161514772-161516549	chr1	+	161515013	161516179	True	NM_000569,NM_001127593,NM_001127592,NM_001127595,NM_001127596,NM_002155	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,+	FCGR3A,FCGR3A,FCGR3A,FCGR3A,FCGR3A,HSPA6	3697,4292,3697,4292,4292,-21028
chr1:161514772-161516549	chr1	+	161596459	161596509	False	NR_024151,NM_000570	chr1,chr1	+,-	HSPA7,FCGR3B	-20661,4699
chr2:96071401-96071869	chr2	+	96071541	96071831	True	NM_001164464,NM_016044	chr2,chr2	-,+	TRIM43B,FAHD2A	78698,-3144
chr2:96071401-96071869	chr2	+	96679929	96679999	False	NM_207328,NR_003698	chr2,chr2	-,+	GPAT2,LOC729234	20778,-3688
chr2:96071401-96071869	chr2	-	97756918	97757208	False	NM_199336,NM_001164315	chr2,chr2	-,+	FAHD2B,ANKRD36	3424,22024
chr1:151734962-151735424	chr1	+	151735017	151735453	True	NM_016178,NM_001134939,NM_031420	chr1,chr1,chr1	+,+,-	OAZ3,OAZ3,MRPL9	3677,-9,637
chr14:102026192-102026392	chr14	+	102026356	102026426	True	NR_002770,NR_031649,NM_001362	chr14,chr14,chr14	-,-,+	DIO3OS,MIR1247,DIO3	-4343,383,1261
chr3:132378293-132378694	chr3	+	132378340	132378661	True	NM_032169,NM_198329,NM_024818	chr3,chr3,chr3	-,+,+	ACAD11,UBA5,UBA5	364,-5101,478
chr3:134368962-134369507	chr3	+	134369032	134369392	True	NM_178554,NM_004441	chr3,chr3	-,+	KY,EPHB1	522,144706
chr20:38631179-38631759	chr20	+	38631274	38631520	True	NM_003286,NM_005461	chr20,chr20	+,-	TOP1,MAFB	1025941,686418
chr17:46507970-46509017	chr17	+	46508047	46508927	True	NM_001075099,NR_033201,NM_003726	chr17,chr17,chr17	-,+,-	SKAP1,LOC404266,SKAP1	-453,158895,-453
chr20:55178854-55179250	chr20	+	55178975	55179072	True	NM_080615,NM_003222	chr20,chr20	-,+	GCNT7,TFAP2C	-77994,25285
chr12:51662663-51663510	chr12	+	51662812	51663452	True	NM_001136269,NM_001031628,NM_001033873	chr12,chr12,chr12	+,-,-	DAZAP2,SMAGP,SMAGP	-30362,800,592
chr22:24232042-24232496	chr22	+	24232085	24232517	True	NM_198440,NM_002415	chr22,chr22	-,+	DERL3,MIF	-50886,4047
chr1:6089315-6090041	chr1	+	6089427	6090060	True	NM_001199860,NM_172130,NM_015102,NM_003636	chr1,chr1,chr1,chr1	+,+,-,+	KCNAB2,KCNAB2,NPHP4,KCNAB2	4287,-3405,-36894,-3405
chr2:234974909-234976141	chr2	+	234975546	234976144	True	NM_006944,NR_024322	chr2,chr2	+,-	SPP2,MSL3P1	-16260,-198491
chr8:11997850-11998835	chr8	+	11997914	11998795	True	NM_201402,NR_027425	chr8,chr8	-,+	USP17L2,FAM66D	-1645,-24674
chr15:25473650-25474666	chr15	+	25473806	25474586	True	NR_003352,NR_003358,NR_003496,NR_003497,NR_003351,NR_003344,NR_003345,NR_003346,NR_003347,NM_130838,NR_003303,NR_003348,NR_003349,NR_003350	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,-,+,+,+,+	SNORD115-37,SNORD115-43,HBII-52-27,HBII-52-28,SNORD115-36,SNORD115-29,SNORD115-30,SNORD115-31,SNORD115-32,UBE3A,SNORD115-11,SNORD115-33,SNORD115-34,SNORD115-35	8546,-5464,-8207,-6356,-5464,-5464,-3507,-1601,-43,176117,-5464,1398,2947,4807
chr2:203241472-203241695	chr2	+	203241608	203241694	True	NM_003352,NM_001204	chr2,chr2	-,+	SUMO1,BMPR2	-138286,-617
chr15:42749883-42750625	chr15	+	42749970	42750589	True	NM_022473,NM_003825	chr15,chr15	-,+	ZFP106,SNAP23	-240,37245
chr2:26621206-26622265	chr2	+	26621212	26622189	True	NM_153835,NM_145038	chr2,chr2	-,+	GPR113,CCDC164	-51527,2594
chr12:53572930-53574107	chr12	+	53573179	53574080	True	NM_001004304,NM_015989	chr12,chr12	+,-	ZNF740,CSAD	454,400
chr3:36903489-36903985	chr3	+	36903489	36903979	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	82623,130861
chr1:152728817-152730408	chr1	+	152729187	152730343	True	NM_001025231,NM_178351	chr1,chr1	+,-	KPRP,LCE1C	162,48814
chr5:125928589-125930227	chr5	+	125928689	125930094	True	NM_001201377,NM_032177,NM_001202404,NM_001182	chr5,chr5,chr5,chr5	-,+,-,-	ALDH7A1,PHAX,ALDH7A1,ALDH7A1	1041,6512,1041,1041
chr19:7597492-7597920	chr19	+	7597630	7597782	True	NM_080662,NM_001166112,NM_001166113,NM_001166111,NM_006702,NM_001166114	chr19,chr19,chr19,chr19,chr19,chr19	-,+,+,+,+,+	PEX11G,PNPLA6,PNPLA6,PNPLA6,PNPLA6,PNPLA6	-43725,1345,1853,1808,1255,2806
chr4:118951274-118951754	chr4	+	118951486	118951704	True	NM_004784,NM_003619	chr4,chr4	+,-	NDST3,PRSS12	3795,322270
chr16:70558225-70558507	chr16	+	70558236	70558400	True	NM_012426,NM_015386,NR_003696,NR_037420,NM_001195139	chr16,chr16,chr16,chr16,chr16	+,-,+,+,-	SF3B3,COG4,SNORD111B,MIR3647,COG4	-601,-779,5004,5001,-779
chr15:75868866-75870717	chr15	+	75869372	75870601	True	NM_153271,NM_002833	chr15,chr15	+,-	SNX33,PTPN9	70746,1074
chr3:53526499-53526894	chr3	+	53526842	53526936	True	NM_001128840,NM_001128839,NM_000720,NM_018403	chr3,chr3,chr3,chr3	+,+,+,-	CACNA1D,CACNA1D,CACNA1D,DCP1A	2094,2094,2094,-145188
chr9:92218292-92218494	chr9	+	92218400	92218503	True	NM_006705,NM_006378	chr9,chr9	+,-	GADD45G,SEMA4D	1423,-123789
chr12:56493376-56494145	chr12	+	56493411	56494106	True	NM_001130420,NM_006191	chr12,chr12	-,+	SMARCC2,PA2G4	89302,3996
chr1:59467999-59468731	chr1	+	59468181	59468577	True	NR_027120,NR_034015	chr1,chr1	-,+	LOC729467,LOC100131060	143952,-217409
chr20:2444507-2444931	chr20	+	2444507	2444933	True	NR_003684,NM_003091,NM_080751,NM_198216	chr20,chr20,chr20,chr20	-,-,+,-	SNORD119,SNRPB,TMC2,SNRPB	-814,6616,72319,6616
chr15:73975228-73975550	chr15	+	73975507	73975579	True	NM_025240,NM_001024736,NM_017455	chr15,chr15,chr15	+,+,-	CD276,CD276,NPTN	1042,1042,-49754
chr2:99796453-99797430	chr2	+	99796573	99797397	True	NM_145212,NR_028356,NM_138798	chr2,chr2,chr2	+,+,-	MRPL30,MRPL30,MITD1	144,144,145
chr16:87740554-87741114	chr16	+	87740582	87741148	True	NM_020655,NM_001184854	chr16,chr16	+,-	JPH3,KLHDC4	-104141,58500
chr11:113789791-113790404	chr11	+	113789829	113790197	True	NM_020886,NM_006028	chr11,chr11	-,+	USP28,HTR3B	-43573,-14297
chrX:73642746-73643898	chrX	+	73642923	73643799	True	NM_006517,NR_028379	chrX,chrX	+,-	SLC16A2,MIR374AHG	-1889,-129514
chr5:151152324-151152698	chr5	+	151152415	151152719	True	NM_005754,NM_198395,NM_004045	chr5,chr5,chr5	+,+,-	G3BP1,G3BP1,ATOX1	-990,-990,-14205
chr1:155112567-155112998	chr1	+	155112689	155112879	True	NM_018973,NM_153741,NM_018845,NM_001122839,NM_001122837	chr1,chr1,chr1,chr1,chr1	-,-,+,+,+	DPM3,DPM3,SLC50A1,SLC50A1,SLC50A1	54,167,-4452,-4452,-4452
chr10:61470026-61470357	chr10	+	61470027	61470307	True	NM_194298,NM_001143774	chr10,chr10	-,+	SLC16A9,PHYHIPL	-378,-532851
chr7:150148187-150148425	chr7	+	150148269	150148399	True	NM_175571,NM_002889	chr7,chr7	+,-	GIMAP8,RARRES2	-358,-109506
chr13:19786647-19787346	chr13	+	19786831	19786964	True	NM_006001,NR_034026	chr13,chr13	-,+	TUBA3C,LOC100287114	-30839,132224
chr13:19786647-19787346	chr13	+	20294131	20294220	False	NM_017520,NR_003272	chr13,chr13	+,-	MPHOSPH8,PSPC1	-86406,62918
chr1:244822862-244823761	chr1	+	244822862	244823807	True	NR_026778,NM_016076	chr1,chr1	-,+	NCRNA00201,PPPDE1	186486,-6563
chr18:29523500-29523864	chr18	+	29523564	29523881	True	NM_014939,NM_017831	chr18,chr18	-,+	TRAPPC8,RNF125	-473,74563
chr16:1581223-1582164	chr16	+	1581357	1582092	True	NM_001013658,NM_024600	chr16,chr16	-,+	PTX4,TMEM204	-42889,2138
chr5:31191149-31191354	chr5	+	31191187	31191331	True	NM_004932,NM_001100412	chr5,chr5	+,-	CDH6,DROSHA	2464,341001
chr9:46269694-46270007	chr9	+	46269847	46269921	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2639117,417644
chr7:144105166-144105573	chr7	+	144105247	144105590	True	NM_005435,NM_001080413	chr7,chr7	+,-	ARHGEF5,NOBOX	-52809,-4461
chr6:134214145-134215781	chr6	+	134214208	134215266	True	NM_003206,NM_145176,NM_198392	chr6,chr6,chr6	+,-,+	TCF21,SLC2A12,TCF21	-3999,158578,-4000
chr12:32270976-32272362	chr12	+	32271356	32272323	True	NM_001714,NM_001013699	chr12,chr12	+,-	BICD1,H3F3C	-11222,-326181
chr7:57510130-57510816	chr7	+	57510344	57510616	True	NR_030766,NM_001159279	chr7,chr7	-,+	LOC642006,ZNF716	-262481,-512
chr19:55660589-55660868	chr19	+	55660642	55660916	True	NM_017729,NM_001126132,NM_001126133,NM_000363,NM_003283	chr19,chr19,chr19,chr19,chr19	+,-,-,-,-	EPS8L1,TNNT1,TNNT1,TNNI3,TNNT1	-68933,-36,-36,8234,-36
chr11:46383347-46383866	chr11	+	46383358	46383914	True	NM_000741,NM_001105540	chr11,chr11	-,+	CHRM4,DGKZ	24243,-264
chr10:27227840-27228412	chr10	+	27228002	27228460	True	NR_026795,NM_001172303	chr10,chr10	-,+	NCRNA00202,MASTL	2520,215292
chr15:66083239-66083875	chr15	+	66083442	66083716	True	NM_004663,NM_005848,NM_001144823	chr15,chr15,chr15	+,-,-	RAB11A,DENND4A,DENND4A	78079,971,971
chr17:27372551-27373246	chr17	+	27372719	27373225	True	NM_016518,NM_004740	chr17,chr17	+,-	PIPOX,TIAF1	-2853,29452
chr1:11118509-11118845	chr1	+	11118635	11118889	True	NM_003132,NM_007375	chr1,chr1	-,+	SRM,TARDBP	1252,-46007
chr21:34774840-34775043	chr21	+	34774876	34774982	True	NM_005534,NM_006134	chr21,chr21	+,-	IFNGR2,TMEM50B	219,77349
chr2:88430780-88432687	chr2	+	88430989	88432619	True	NM_018271,NM_001443	chr2,chr2	+,-	THNSL2,FABP1	37215,-3339
chr6:71384396-71385276	chr6	+	71384701	71385045	True	NM_080742,NM_001044305,NM_021940	chr6,chr6,chr6	-,+,+	B3GAT2,SMAP1,SMAP1	281798,-7284,-7284
chr5:137776480-137778121	chr5	+	137776713	137777875	True	NM_004730,NM_016606	chr5,chr5	-,+	ETF1,REEP2	101107,-1988
chr2:133039081-133040246	chr2	+	133039088	133040182	True	NM_001508,NR_027020	chr2,chr2	+,-	GPR39,ANKRD30BL	133964,-23546
chr14:45363997-45365553	chr14	+	45364204	45365577	True	NM_017658,NM_001017923	chr14,chr14	-,+	KLHL28,C14orf28	65652,929
chr6:39282275-39282984	chr6	+	39282432	39282976	True	NM_001135105,NM_032115,NM_001135107,NM_001135106,NM_001135111,NM_031460,NM_002062	chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,-,-,-,+	KCNK16,KCNK16,KCNK16,KCNK16,KCNK17,KCNK17,GLP1R	7404,7404,7404,7404,-195,-196,-265926
chr20:38732052-38733135	chr20	+	38732080	38733103	True	NM_003286,NM_005461	chr20,chr20	+,-	TOP1,MAFB	924358,584823
chr11:67195619-67195882	chr11	+	67195662	67195860	True	NM_005608,NM_003952	chr11,chr11	-,+	PTPRCAP,RPS6KB2	9343,74
chr11:74006428-74008135	chr11	+	74006435	74007943	True	NM_182904,NM_016147	chr11,chr11	-,+	P4HA3,PPME1	14813,-124118
chr19:917568-917781	chr19	+	917676	917750	True	NM_138774,NM_005224,NM_032551	chr19,chr19,chr19	-,+,+	C19orf22,ARID3A,KISS1R	-4451,8286,-385
chr5:180237407-180237727	chr5	+	180237459	180237669	True	NM_001114617,NM_001114618,NM_001114619,NR_027183,NM_002406,NM_001114620	chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,+,-,-	MGAT1,MGAT1,MGAT1,LOC729678,MGAT1,MGAT1	-322,-642,-6557,19289,-7411,-6557
chr2:111140614-111141170	chr2	+	111140670	111141066	True	NR_037626,NR_027244	chr2,chr2	+,-	LOC100507334,LOC151009	-137506,1097
chr2:111140614-111141170	chr2	-	110745592	110745988	False	NR_037627,NR_036225	chr2,chr2	+,-	LOC100288570,MIR4267	-40376,81681
chr15:65576281-65577566	chr15	+	65576306	65577482	True	NM_001101362,NM_017851	chr15,chr15	+,-	KBTBD13,PARP16	-207203,1589
chr6:7110150-7110545	chr6	+	7110222	7110588	True	NM_001003700,NM_001003699,NM_001003698,NM_001168344,NM_003144	chr6,chr6,chr6,chr6,chr6	+,+,+,+,-	RREB1,RREB1,RREB1,RREB1,SSR1	-2195,-2195,-2195,-2451,203003
chr10:23726505-23726722	chr10	+	23726504	23726702	True	NM_153714,NM_001145373	chr10,chr10	-,+	C10orf67,OTUD1	-92732,1495
chr8:11628376-11629191	chr8	+	11628402	11629212	True	NM_001135747,NM_001135746,NM_145043,NM_001908,NM_001135748	chr8,chr8,chr8,chr8,chr8	+,+,+,-,+	NEIL2,NEIL2,NEIL2,CTSB,NEIL2	-1281,-1281,-1281,96484,-1281
chr19:18548250-18548516	chr19	+	18548406	18548486	True	NM_032627,NM_001170939,NM_001170938,NM_016368	chr19,chr19,chr19,chr19	+,-,-,-	SSBP4,ISYNA1,ISYNA1,ISYNA1	-18311,485,675,675
chr7:99775193-99775562	chr7	+	99775257	99775553	True	NM_024637,NM_152742,NM_012447	chr7,chr7,chr7	-,-,+	GAL3ST4,GPC2,STAG3	-8884,-267,0
chr13:19956859-19957471	chr13	+	19956945	19957519	True	NR_034026,NR_027248	chr13,chr13	+,-	LOC100287114,ANKRD26P3	-37807,-37832
chr17:56361832-56363704	chr17	+	56361898	56363092	True	NR_027647,NM_000250	chr17,chr17	+,-	LPO,MPO	-46162,-3602
chr19:3500749-3501316	chr19	+	3500772	3501264	True	NM_031304,NM_016263,NM_001145165	chr19,chr19,chr19	-,+,-	DOHH,FZR1,DOHH	-151,5030,-48
chr3:182816776-182816991	chr3	+	182816805	182816941	True	NM_020166,NM_032047	chr3,chr3	-,+	MCCC1,B3GNT5	474,154090
chr6:70506804-70507785	chr6	+	70506832	70507782	True	NM_018368,NM_001858	chr6,chr6	-,+	LMBRD1,COL19A1	-26,68665
chr6:26522435-26522870	chr6	+	26522466	26522909	True	NR_026790,NM_024639	chr6,chr6	+,-	HCG11,ZNF322A	-583,137105
chr12:95378118-95379120	chr12	+	95378377	95378471	True	NR_036685,NM_018838	chr12,chr12	+,-	KRT19P2,NDUFA12	-150198,19098
chr10:101983249-101984284	chr10	+	101983407	101984093	True	NM_005063,NM_001278	chr10,chr10	+,-	SCD,CHUK	122678,5301
chr1:31379005-31380683	chr1	+	31379259	31380399	True	NR_002762,NM_014654	chr1,chr1	+,-	PRO0611,SDC3	80512,1131
chr5:167957262-167957711	chr5	+	167957333	167957675	True	NR_029520,NR_024356	chr5,chr5	-,+	MIR103-1,FBLL1	30353,-802
chr17:37010063-37010596	chr17	+	37010079	37010409	True	NR_002576,NM_000978,NM_006148	chr17,chr17,chr17	-,-,+	SNORA21,RPL23,LASP1	-831,-26,15702
chr17:7161999-7163597	chr17	+	7162123	7163409	True	NM_015343,NM_001307,NM_203415,NM_203414,NM_203413,NM_001143775,NM_015362,NM_001185023,NM_001185022	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,+,+,-,+,-,-	CTDNEP1,CLDN7,C17orf81,C17orf81,C17orf81,CTDNEP1,C17orf81,CLDN7,CLDN7	-6864,2905,-6802,-6623,-6623,-7128,-6623,2905,3153
chr21:31278298-31280038	chr21	+	31278360	31280067	True	NM_175611,NR_027021	chr21,chr21	-,+	GRIK1,GRIK1-AS1	32267,-157929
chr3:46734321-46734743	chr3	+	46734378	46734788	True	NM_001190707,NM_147196,NR_033815,NM_147129	chr3,chr3,chr3,chr3	-,+,-,-	ALS2CL,TMIE,ALS2CL,ALS2CL	408,8034,456,456
chr2:209106952-209107579	chr2	+	209106987	209107456	True	NM_005896,NM_001178000	chr2,chr2	-,+	IDH1,PIKFYVE	12409,23534
chr2:68022074-68022307	chr2	+	68022076	68022365	True	NM_001190263,NM_020143	chr2,chr2	-,+	C1D,PNO1	267853,362639
chr10:82168794-82169117	chr10	+	82168848	82169008	True	NR_024572,NM_032333,NM_138812	chr10,chr10,chr10	+,+,-	C10orf58,C10orf58,DYDC1	4582,-657,-52348
chr22:38712254-38712729	chr22	+	38712287	38712603	True	NM_152221,NM_001161573,NM_001894	chr22,chr22,chr22	-,+,-	CSNK1E,MAFF,CSNK1E	862,-113311,1538
chr12:7593520-7595033	chr12	+	7593699	7595071	True	NM_174941,NM_001080454	chr12,chr12	-,+	CD163L1,ACSM4	1728,-136831
chr11:124671098-124672427	chr11	+	124671161	124672247	True	NM_006176,NM_024631	chr11,chr11	+,-	NRGN,C11orf61	-61391,-862
chr16:58582177-58582912	chr16	+	58582245	58582800	True	NR_002978,NM_024860	chr16,chr16	-,+	SNORA46,SETD6	30,-32921
chr16:66727619-66728538	chr16	+	66728058	66728334	True	NR_037619,NM_178818,NM_181521	chr16,chr16,chr16	+,-,-	CMTM3,CMTM4,CMTM4	-89476,2326,2326
chr15:23035021-23035375	chr15	+	23035315	23035393	True	NM_001008892,NM_001184888,NM_030922,NM_001008860,NM_001008894,NM_001033028,NM_001184889	chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,-,-,-,+,-	NIPA2,NIPA2,NIPA2,NIPA2,NIPA2,CYFIP1,NIPA2	-888,-888,-888,-888,-888,-79614,-888
chr15:74465269-74466127	chr15	+	74465532	74466088	True	NM_001199042,NM_201526,NM_005545	chr15,chr15,chr15	-,+,+	STRA6,ISLR,ISLR	29182,816,-2
chr12:28122624-28122980	chr12	+	28122743	28123021	True	NM_020782,NM_002820,NM_198966,NM_198964,NM_198965	chr12,chr12,chr12,chr12,chr12	+,-,-,-,-	KLHDC5,PTHLH,PTHLH,PTHLH,PTHLH	-189620,1945,7,7,1945
chr6:86353911-86354615	chr6	+	86353918	86354547	True	NM_006372,NM_002526,NM_001159673,NM_001159675,NM_001159674,NM_001159677,NM_001159676	chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,+,-,-,-,-,-	SYNCRIP,NT5E,SYNCRIP,SYNCRIP,SYNCRIP,SYNCRIP,SYNCRIP	-875,-194667,-1278,-2749,-1310,-875,-2749
chr19:570452-570898	chr19	+	570454	570514	True	NM_198589,NM_005035,NM_001728,NM_198591	chr19,chr19,chr19,chr19	+,-,+,+	BSG,POLRMT,BSG,BSG	2022,63104,2022,810
chr2:24151369-24152505	chr2	+	24151462	24151846	True	NM_181713,NM_017552	chr2,chr2	+,-	UBXN2A,ATAD2B	11529,-1528
chr22:24251582-24253565	chr22	+	24251822	24253596	True	NM_001080843,NM_002415	chr22,chr22	-,+	GSTT2B,MIF	49822,-15315
chr9:100162211-100163684	chr9	+	100162278	100163646	True	NR_026847,NM_014290	chr9,chr9	-,+	LOC286359,TDRD7	-3305,10655
chr21:34918941-34919439	chr21	+	34919158	34919230	True	NM_175085,NM_138927,NM_000819,NM_001136005,NM_032195,NM_001136006	chr21,chr21,chr21,chr21,chr21,chr21	-,+,-,-,+,-	GART,SON,GART,GART,SON,GART	-4694,-3866,-4694,-3963,-3866,-3960
chr1:212592560-212593075	chr1	+	212592766	212593118	True	NM_018252,NM_001198862,NM_013349	chr1,chr1,chr1	-,-,+	TMEM206,TMEM206,NENF	-4499,-4523,13110
chr6:41754243-41754485	chr6	+	41754291	41754499	True	NM_001134493,NM_013397,NM_006653	chr6,chr6,chr6	+,+,-	TOMM6,PRICKLE4,FRS3	681,-5842,-6661
chr12:50305306-50305512	chr12	+	50305400	50305484	True	NM_000486,NM_012306,NR_026948	chr12,chr12,chr12	+,-,-	AQP2,FAIM2,LOC283332	39039,-7640,212
chr20:62682587-62682968	chr20	+	62682588	62682994	True	NM_198723,NM_018419	chr20,chr20	+,-	TCEA2,SOX18	5444,-1609
chr19:19842239-19842596	chr19	+	19842404	19842600	True	NM_033204,NM_021030	chr19,chr19	+,-	ZNF101,ZNF14	-62796,1371
chr2:40002340-40003664	chr2	+	40002450	40003536	True	NM_152390,NM_025264,NR_028102	chr2,chr2,chr2	+,-,-	TMEM178,THUMPD2,THUMPD2	-109476,2939,2939
chr22:50984595-50984814	chr22	+	50984640	50984852	True	NM_138433,NM_001014440	chr22,chr22	+,-	KLHDC7B,ODF3B	1609,-13632
chr15:64995693-64996190	chr15	+	64995698	64996186	True	NM_001195059,NM_002537	chr15,chr15	+,-	PLEKHO2,OAZ2	137895,-236
chr20:62290288-62290535	chr20	+	62290304	62290572	True	NR_037882,NM_016434,NM_015894,NM_032957	chr20,chr20,chr20,chr20	+,+,-,+	RTEL1-TNFRSF6B,RTEL1,STMN3,RTEL1	-1192,-1192,-5524,-1192
chr8:67526430-67528219	chr8	+	67526439	67527792	True	NM_019607,NM_001080416,NM_001144755	chr8,chr8,chr8	+,-,-	C8orf44,MYBL1,MYBL1	51994,-959,-959
chr17:34504172-34505062	chr17	+	34504770	34505035	True	NM_001001417,NM_001001435	chr17,chr17	-,+	TBC1D3B,CCL4L1	-782,33432
chr17:34504172-34505062	chr17	-	36282919	36283184	False	NM_032258,NR_024178,NM_001123391	chr17,chr17,chr17	+,-,+	TBC1D3F,LOC284100,TBC1D3	775,-38556,775
chr17:34504172-34505062	chr17	+	34593002	34593079	False	NM_001001435,NM_001001418	chr17,chr17	+,-	CCL4L1,TBC1D3C	46954,-975
chr17:34504172-34505062	chr17	+	34758017	34758073	False	NM_001123392,NM_004773	chr17,chr17	-,+	TBC1D3H,ZNHIT3	-967,84399
chr17:34504172-34505062	chr17	+	34808878	34809143	False	NM_001001418,NM_004773,NM_001040282	chr17,chr17,chr17	-,+,-	TBC1D3C,ZNHIT3,TBC1D3G	-787,33329,-775
chr1:16137465-16138358	chr1	+	16137767	16138277	True	NM_001089591,NM_015001	chr1,chr1	-,+	UQCRHL,SPEN	-3573,36081
chr1:226112734-226113302	chr1	+	226112868	226113177	True	NM_000120,NM_013328	chr1,chr1	+,-	EPHX1,PYCR2	-99918,-903
chr1:227132534-227133215	chr1	+	227132711	227133261	True	NM_020247,NM_002221	chr1,chr1	+,-	ADCK3,ITPKB	-4826,-205835
chr12:54411788-54412003	chr12	+	54411820	54412018	True	NM_014620,NR_003716,NM_022658,NM_153693,NR_003084	chr12,chr12,chr12,chr12,chr12	+,-,+,+,+	HOXC4,HOTAIR,HOXC8,HOXC6,HOXC5	-1229,-49305,-8981,-1229,-1229
chrX:24478425-24479123	chrX	+	24478429	24478683	True	NM_001136233,NM_005391,NM_001142386	chrX,chrX,chrX	-,+,+	FAM48B2,PDK3,PDK3	-146997,4660,4660
chr19:53665416-53665823	chr19	+	53665542	53665828	True	NM_032584,NM_173856,NM_001172674,NM_001172675	chr19,chr19,chr19,chr19	-,+,-,-	ZNF347,VN1R2,ZNF347,ZNF347	-3220,95716,-3229,-3220
chr3:195936782-195937656	chr3	+	195937474	195937574	True	NM_001039617,NM_152672	chr3,chr3	-,+	ZDHHC19,OSTalpha	776,5808
chr5:42424196-42424423	chr5	+	42424220	42424466	True	NM_001085486,NM_000163	chr5,chr5	-,+	SEPP1,GHR	387610,-245
chr6:44384426-44385904	chr6	+	44384494	44385544	True	NM_001253,NM_020745	chr6,chr6	+,-	CDC5L,AARS2	-29250,-103431
chr17:5342593-5343209	chr17	+	5342597	5343225	True	NR_027685,NM_001212	chr17,chr17	+,-	RPAIN,C1QBP	-19687,-126
chr14:24459546-24461237	chr14	+	24459667	24460666	True	NR_023922,NM_198083	chr14,chr14	-,+	C14orf167,DHRS4L2	-35369,-1704
chr14:24459546-24461237	chr14	+	24424520	24424583	False	NR_023924,NR_023922,NR_023923,NM_021004,NR_023921	chr14,chr14,chr14,chr14,chr14	-,-,-,+,-	C14orf167,C14orf167,C14orf167,DHRS4,C14orf167	-1128,-222,-1128,-1619,-1128
chr9:131534346-131535165	chr9	+	131534427	131534765	True	NM_006336,NM_018201	chr9,chr9	-,+	ZER1,TBC1D13	-229,14744
chr15:52310916-52311248	chr15	+	52310950	52311172	True	NM_138792,NM_002748	chr15,chr15	-,+	LEO1,MAPK6	-46992,238
chr1:156211741-156212661	chr1	+	156212022	156212620	True	NM_024897,NM_199173,NM_198406	chr1,chr1,chr1	-,+,-	PAQR6,BGLAP,PAQR6	5273,-122,5222
chrX:102331099-102331898	chrX	+	102331174	102331916	True	NM_018476,NM_001127688	chrX,chrX	-,+	BEX1,BEX4	-12006,138103
chr17:11781344-11781962	chr17	+	11781366	11781823	True	NM_004662,NM_144680	chr17,chr17	+,-	DNAH9,ZNF18	4395,118930
chr16:56622669-56623267	chr16	+	56622731	56623131	True	NM_005954,NM_031885	chr16,chr16	+,-	MT3,BBS2	135,-68723
chr21:46493073-46493406	chr21	+	46493088	46493352	True	NM_001112,NM_001160230,NR_027292,NM_015834,NR_027674,NR_027672,NR_027673,NM_015833	chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21	+,+,-,+,+,+,+,+	ADARB1,ADARB1,C21orf122,ADARB1,ADARB1,ADARB1,ADARB1,ADARB1	1140,1140,38,1140,1140,1140,1140,1140
chr8:73448061-73448697	chr8	+	73448296	73448715	True	NM_004770,NR_033867	chr8,chr8	+,-	KCNB2,LOC392232	910,-284427
chr6:35889048-35890000	chr6	+	35889060	35889749	True	NR_034069,NM_139013,NM_003137	chr6,chr6,chr6	-,+,-	SRPK1,MAPK14,SRPK1	-103,105704,-103
chr22:50746847-50747055	chr22	+	50746857	50747075	True	NM_012401,NM_014678	chr22,chr22	-,+	PLXNB2,PPP6R2	-855,34684
chr2:190650705-190651701	chr2	+	190650863	190651332	True	NM_001128143,NM_016467,NM_001128144,NM_001128150,NM_000534	chr2,chr2,chr2,chr2,chr2	+,-,+,-,+	PMS1,ORMDL1,PMS1,ORMDL1,PMS1	-2103,-1766,-2103,-1766,-2103
chr1:43747655-43748602	chr1	+	43747953	43748541	True	NM_182517,NM_001164829,NM_144626	chr1,chr1,chr1	-,-,+	C1orf210,C1orf210,TMEM125	2759,2797,-12339
chr8:142378323-142378609	chr8	+	142378327	142378565	True	NR_024441,NM_005293	chr8,chr8	+,-	LOC731779,GPR20	-27730,-962
chr3:69116521-69118015	chr3	+	69116670	69117544	True	NM_006407,NM_003968	chr3,chr3	+,-	ARL6IP5,UBA3	16545,12030
chr4:169033329-169033892	chr4	+	169033539	169033885	True	NM_017631,NM_007193	chr4,chr4	-,+	DDX60,ANXA10	206131,-19911
chr12:7850589-7852260	chr12	+	7850780	7852083	True	NM_199286,NM_020634	chr12,chr12	+,-	DPPA3,GDF3	12005,-2420
chr22:21358117-21358717	chr22	+	21358157	21358448	True	NR_027051,NM_030573,NR_027052,NM_001008695	chr22,chr22,chr22,chr22	+,-,+,-	FLJ39582,THAP7,FLJ39582,THAP7	-1997,-1753,-1997,-1753
chr3:10053409-10054162	chr3	+	10053469	10054071	True	NM_001008737,NM_033084	chr3,chr3	-,+	LOC401052,FANCD2	-690,14041
chr3:10053409-10054162	chr3	+	11953997	11954047	False	NM_138807,NM_003178	chr3,chr3	-,+	C3orf31,SYN2	-65645,91814
chr9:90385971-90386266	chr9	+	90385978	90386170	True	NR_027917,NM_001039803	chr9,chr9	+,-	CTSL3,CDK20	1659,203575
chr3:112358622-112359646	chr3	+	112358626	112359567	True	NM_017945,NM_199511,NM_199512	chr3,chr3,chr3	+,-,-	SLC35A5,CCDC80,CCDC80	-77782,460,460
chr4:111543809-111544170	chr4	+	111543809	111544073	True	NM_001977,NM_000325	chr4,chr4	+,-	ENPEP,PITX2	-146631,231
chr19:19009006-19009670	chr19	+	19009130	19009690	True	NM_198207,NM_021267,NM_019070,NM_001492	chr19,chr19,chr19,chr19	-,-,+,-	LASS1,LASS1,DDX49,GDF1	-2177,-2177,20793,-2177
chrX:138529777-138530061	chrX	+	138529836	138530074	True	NR_028597,NM_001171877	chrX,chrX	+,-	SRD5A1P1,MCF2	-916,194980
chr14:91282881-91283207	chr14	+	91283106	91283224	True	NM_001010854,NM_001102366	chr14,chr14	-,+	TTC7B,C14orf159	-345,297132
chrY:25345194-25345465	chrY	+	25345357	25345505	True	NM_020364,NM_001005375,NM_004081,NM_020420	chrY,chrY,chrY,chrY	+,-,-,-	DAZ3,DAZ4,DAZ1,DAZ4	20075,-103,-118,-103
chrY:25345194-25345465	chrY	-	25365329	25365477	False	NM_020364,NM_020420,NM_001005786,NM_001005785,NM_020363	chrY,chrY,chrY,chrY,chrY	+,+,+,+,+	DAZ3,DAZ4,DAZ2,DAZ2,DAZ2	103,103,126,126,126
chrY:25345194-25345465	chrY	+	26959742	26959890	False	NM_020364,NM_001005375,NM_020420	chrY,chrY,chrY	-,+,-	DAZ3,DAZ4,DAZ4	-103,20076,-103
chrY:25345194-25345465	chrY	-	26979715	26979863	False	NM_020364,NM_001005375,NM_001005785,NM_020420,NM_001005786	chrY,chrY,chrY,chrY,chrY	+,+,+,+,+	DAZ3,DAZ4,DAZ2,DAZ4,DAZ2	103,103,126,103,126
chr11:18659253-18660012	chr11	+	18659345	18659734	True	NM_153347,NM_194285	chr11,chr11	+,-	TMEM86A,SPTY2D1	60616,-3325
chr19:3784787-3785061	chr19	+	3784790	3784962	True	NM_139354,NM_139355,NM_172251	chr19,chr19,chr19	-,-,+	MATK,MATK,MRPL54	1503,1503,-22176
chr8:66564500-66565669	chr8	+	66564750	66565432	True	NM_018120,NM_014637,NM_001145839	chr8,chr8,chr8	-,+,+	ARMC1,MTFR1,MTFR1	-18298,-7921,-7921
chr14:52340997-52341853	chr14	+	52341492	52341889	True	NM_007361,NM_053064	chr14,chr14	-,+	NID2,GNG2	194107,-14504
chr2:170665610-170666281	chr2	+	170665971	170666094	True	NM_003142,NM_014168	chr2,chr2	+,-	SSB,METTL5	-10642,15314
chr17:1397663-1398237	chr17	+	1397740	1398028	True	NM_001080779,NM_001080950,NR_028514,NM_033375	chr17,chr17,chr17,chr17	-,-,+,-	MYO1C,MYO1C,LOC100306951,MYO1C	-1739,-8689,22184,-2768
chr3:62359738-62360168	chr3	+	62359813	62360183	True	NM_018008,NM_020685	chr3,chr3	-,+	FEZF2,C3orf14	-623,-54470
chr10:6016694-6017827	chr10	+	6016997	6017504	True	NM_032807,NR_033494,NM_002189,NM_172200	chr10,chr10,chr10,chr10	+,-,-,-	FBXO18,IL15RA,IL15RA,IL15RA	-80700,2701,2133,2133
chr4:82386092-82387308	chr4	+	82386464	82387352	True	NM_152545,NM_001201	chr4,chr4	-,+	RASGEF1B,BMP3	5759,-434407
chr19:56135034-56135777	chr19	+	56135128	56135613	True	NM_001195605,NM_203374	chr19,chr19	+,-	ZNF865,ZNF784	-10227,378
chr2:72376314-72376553	chr2	+	72376313	72376467	True	NM_019885,NM_001130987	chr2,chr2	-,+	CYP26B1,DYSF	-1350,-682532
chr19:48385166-48386382	chr19	+	48385171	48386379	True	NM_003167,NR_004437	chr19,chr19	-,+	SULT2A1,SNAR-A12	3325,24555
chr2:74062403-74063504	chr2	+	74062625	74063326	True	NM_201647,NM_006463,NM_003584,NM_213622	chr2,chr2,chr2,chr2	+,+,-,+	STAMBP,STAMBP,DUSP11,STAMBP	-6590,-6549,-55341,-6529
chr2:70486503-70486745	chr2	+	70486506	70486740	True	NM_016297,NM_022173	chr2,chr2	+,-	PCYOX1,TIA1	-1326,-10727
chr9:139759368-139760306	chr9	+	139759377	139759717	True	NM_003792,NM_153200,NM_206920	chr9,chr9,chr9	-,-,+	EDF1,EDF1,MAMDC4	1071,1071,-12609
chr12:51786607-51786988	chr12	+	51786640	51786742	True	NM_004858,NM_007210	chr12,chr12	+,-	SLC4A8,GALNT6	31851,-1440
chr11:77185281-77185586	chr11	+	77185374	77185614	True	NM_001128620,NM_002576,NM_173039	chr11,chr11,chr11	-,-,+	PAK1,PAK1,AQP11	-266,-266,115065
chr22:39883875-39884110	chr22	+	39883958	39884158	True	NM_001098270,NM_194326	chr22,chr22	+,-	MGAT3,RPS19BP1	-780,44752
chr6:108877935-108879001	chr6	+	108878071	108878751	True	NM_201559,NM_152827,NM_001455	chr6,chr6,chr6	+,-,+	FOXO3,SNX3,FOXO3	2274,-295607,3317
chr8:145025126-145025432	chr8	+	145025254	145025452	True	NM_000837,NR_030383,NM_201379,NM_201381,NM_201380,NM_201383,NM_201382	chr8,chr8,chr8,chr8,chr8,chr8,chr8	+,-,-,-,-,-,-	GRINA,MIR661,PLEC,PLEC,PLEC,PLEC,PLEC	38773,-5807,2686,-6349,-210,-8562,-7144
chr1:161201585-161202595	chr1	+	161202374	161202638	True	NM_001077470,NM_001077471,NM_001077472,NM_001077473,NM_001077474,NM_001077475,NM_001077476,NM_001077477,NM_001077478,NM_001077479,NM_001077469,NM_001077481,NM_001077480,NM_001077482,NM_032174,NM_005122,NM_001643	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,-,-,-,-,-,-,-,-,-,+,-,-	NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,TOMM40L,NR1I3,APOA2	5412,5412,5412,5412,5412,5412,5412,5412,5412,5412,5412,5412,5412,5412,-6592,5412,-8956
chr15:22956294-22956615	chr15	+	22956342	22956660	True	NM_001033028,NM_001008860	chr15,chr15	+,-	CYFIP1,NIPA2	-638,77817
chr6:142491861-142493674	chr6	+	142492057	142493717	True	NM_016485,NM_002511	chr6,chr6	+,-	VTA1,NMBR	-23709,-82121
chr7:150036110-150036859	chr7	+	150036122	150036752	True	NM_138434,NM_002889	chr7,chr7	+,-	C7orf29,RARRES2	-9235,2061
chr4:49314683-49316028	chr4	+	49315117	49315192	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-326910,-406302
chr17:76227142-76227349	chr17	+	76227172	76227316	True	NR_002219,NM_001204210,NM_001204211,NM_001204212	chr17,chr17,chr17,chr17	-,+,+,+	EPR1,TMEM235,TMEM235,TMEM235	-6389,74,74,74
chr3:172469167-172470010	chr3	+	172469284	172469893	True	NM_018098,NM_020792	chr3,chr3	+,-	ECT2,NCEH1	2404,-40276
chr14:93536273-93536582	chr14	+	93536326	93536452	True	NM_001142594,NR_002808	chr14,chr14	-,+	ITPK1,ITPK1-AS1	45861,-2580
chr1:162775552-162776093	chr1	+	162775579	162776135	True	NM_178550,NM_016371	chr1,chr1	-,+	C1orf110,HSD17B7	62520,-15134
chr5:145583502-145583805	chr5	+	145583667	145583858	True	NM_020117,NM_018989	chr5,chr5	-,+	LARS,RBM27	-21373,-556
chr20:33265706-33266032	chr20	+	33265818	33265994	True	NM_080476,NM_021202	chr20,chr20	-,+	PIGU,TP53INP2	-729,26153
chr7:6537952-6539814	chr7	+	6538560	6539788	True	NM_006854,NM_001134387	chr7,chr7	-,+	KDELR2,ZDHHC4	-14711,77276
chr9:131039091-131039550	chr9	+	131039144	131039548	True	NM_001040011,NM_004486	chr9,chr9	+,-	C9orf119,GOLGA2	-770,-876
chr3:28293424-28294736	chr3	+	28293517	28294709	True	NM_022461,NM_182523	chr3,chr3	-,+	AZI2,CMC1	95959,-10454
chr13:45491091-45492069	chr13	+	45491463	45492077	True	NM_012345,NM_018559	chr13,chr13	-,+	NUFIP1,KIAA1704	71586,71609
chr15:86220103-86220988	chr15	+	86220142	86220753	True	NR_031682,NM_144767	chr15,chr15	-,+	MIR1276,AKAP13	93119,75
chr22:43487044-43487405	chr22	+	43487197	43487315	True	NM_001197,NR_027779,NM_012263	chr22,chr22,chr22	+,-,-	BIK,TTLL1,TTLL1	19441,-1763,-1763
chr9:131645088-131645301	chr9	+	131645088	131645290	True	NM_001127245,NM_001127244,NM_019594,NM_001122672,NM_001122671,NM_004059	chr9,chr9,chr9,chr9,chr9,chr9	+,+,+,-,-,-	LRRC8A,LRRC8A,LRRC8A,CCBL1,CCBL1,CCBL1	-748,-358,-748,-734,-734,-734
chr13:49831820-49833557	chr13	+	49832302	49833592	True	NM_030925,NR_036439	chr13,chr13	-,+	CAB39L,CDADC1	142194,-10312
chr10:79685894-79686162	chr10	+	79685977	79686211	True	NR_024585,NM_004747	chr10,chr10	+,-	LOC100128292,DLG5	358,187
chr19:6991870-6992744	chr19	+	6992295	6992537	True	NR_024075,NM_001136507	chr19,chr19	-,+	EMR4P,MBD3L5	-1438,38056
chr7:143457337-143458722	chr7	+	143457424	143458726	True	NM_178561,NM_001130026	chr7,chr7	-,+	CTAGE6P,FAM115C	-2581,-44536
chr7:143457337-143458722	chr7	-	143264930	143266232	False	NM_005232,NM_001008747	chr7,chr7	-,+	EPHA1,CTAGE15P	-158945,2657
chrX:129298064-129299237	chrX	+	129298278	129299180	True	NM_001130847,NM_004794,NM_004208,NM_145812,NM_145813	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	AIFM1,RAB33A,AIFM1,AIFM1,AIFM1	733,6592,733,733,733
chr17:7230232-7230516	chr17	+	7230243	7230521	True	NM_001005408,NM_032442,NM_014716	chr17,chr17,chr17	-,-,+	NEURL4,NEURL4,ACAP1	2167,2167,9326
chr9:127175267-127177039	chr9	+	127175629	127177019	True	NM_002799,NM_001161808	chr9,chr9	-,+	PSMB7,GPR144	752,36403
chr7:148295006-148296656	chr7	+	148295284	148296417	True	NM_145304,NM_001203249	chr7,chr7	+,-	C7orf33,EZH2	-7690,284239
chrX:20154456-20155486	chrX	+	20154556	20155021	True	NR_023358,NM_001173456,NM_001412	chrX,chrX,chrX	-,+,-	SCARNA9L,PDHA1,EIF1AX	-25,-792607,5000
chr2:47008274-47008708	chr2	+	47008302	47008637	True	NR_034099,NM_001171506	chr2,chr2	+,-	LOC388948,MCFD2	35169,134427
chr11:60264983-60266363	chr11	+	60265280	60266258	True	NM_022349,NM_017716,NM_001164470	chr11,chr11,chr11	-,+,+	MS4A6A,MS4A12,MS4A12	-314606,-5093,-5093
chr12:121018884-121019182	chr12	+	121018949	121019231	True	NM_014868,NM_015918,NM_198202	chr12,chr12,chr12	+,-,-	RNF10,POP5,POP5	-46868,16,20
chr16:57575380-57576624	chr16	+	57575454	57576406	True	NM_033212,NM_153837	chr16,chr16	-,+	CCDC102A,GPR114	-4977,194
chr19:42761917-42763007	chr19	+	42762049	42762122	True	NM_006494,NM_015125	chr19,chr19	-,+	ERF,CIC	-2740,26694
chr10:3828930-3829286	chr10	+	3829147	3829309	True	NM_001160125,NM_001160124,NM_002627,NR_027653,NM_001300	chr10,chr10,chr10,chr10,chr10	-,-,+,-,-	KLF6,KLF6,PFKP,KLF6,KLF6	-1674,-1674,-719446,-1674,-1674
chr19:39925861-39926226	chr19	+	39926001	39926225	True	NM_001111020,NM_001130825,NM_001130824,NM_001020	chr19,chr19,chr19,chr19	+,+,+,-	SUPT5H,SUPT5H,SUPT5H,RPS16	9960,9960,9960,443
chr11:96119416-96120736	chr11	+	96119517	96120727	True	NM_024725,NM_003772	chr11,chr11	-,+	CCDC82,JRKL	2406,2430
chr9:130968950-130970497	chr9	+	130968964	130970034	True	NM_012127,NM_004408,NM_001005336,NM_001131015	chr9,chr9,chr9,chr9	-,+,+,-	CIZ1,DNM1,DNM1,CIZ1	-2302,-3352,-3352,-2302
chr16:2852687-2854414	chr16	+	2853022	2854456	True	NM_152891,NM_001135086	chr16,chr16	-,+	PRSS33,PRSS41	-16314,-4598
chrX:46936222-46936697	chrX	+	46936270	46936496	True	NM_004683,NM_152869,NM_001135998	chrX,chrX,chrX	+,+,-	RGN,RGN,NDUFB11	1278,1278,67649
chrX:129536472-129537533	chrX	+	129536514	129537335	True	NM_016024,NM_178471	chrX,chrX	+,-	RBMX2,GPR119	-622,-17003
chr3:42449964-42450258	chr3	+	42449965	42450229	True	NM_004624,NM_144634	chr3,chr3	+,-	VIPR1,LYZL4	93874,1886
chr7:76664218-76664700	chr7	+	76664316	76664536	True	NM_006682,NR_028058	chr7,chr7	-,+	FGL2,LOC100132832	164664,4260
chr7:76664218-76664700	chr7	-	99900835	99900979	False	NM_001004351,NR_028038	chr7,chr7	+,-	SPDYE3,GATS	4345,-30980
chr7:76664218-76664700	chr7	+	72503000	72503220	False	NR_003614,NR_003664	chr7,chr7	+,-	PMS2L2,SPDYE8P	-26378,-2691
chr7:76664218-76664700	chr7	-	74933621	74933837	False	NR_003614,NR_003664	chr7,chr7	-,+	PMS2L2,SPDYE8P	54431,2695
chr7:76664218-76664700	chr7	-	74961646	74961862	False	NR_003614,NR_003664	chr7,chr7	-,+	PMS2L2,SPDYE8P	26406,2697
chr12:128051438-128051812	chr12	+	128051641	128051707	True	NR_033970,NR_033987	chr12,chr12	-,+	LOC440117,FLJ37505	-692405,314454
chr2:62080338-62080927	chr2	+	62080431	62080849	True	NR_037710,NM_032180,NM_001201543,NM_152516	chr2,chr2,chr2,chr2	-,-,-,+	FAM161A,FAM161A,FAM161A,COMMD1	479,479,479,51953
chr8:12175720-12176521	chr8	+	12175907	12176363	True	NM_001195257,NM_001037804,NR_026789	chr8,chr8,chr8	-,-,+	LOC100133267,DEFB130,FAM66A	-82,-82,43164
chr8:12175720-12176521	chr8	+	11929338	11929795	False	NM_001195257,NM_001037804,NM_001039615	chr8,chr8,chr8	-,-,+	LOC100133267,DEFB130,ZNF705D	-82,-82,17051
chr8:57232876-57233196	chr8	+	57232876	57233150	True	NM_138969,NM_024300	chr8,chr8	-,+	SDR16C5,CHCHD7	141,-108612
chr16:84229409-84229778	chr16	+	84229479	84229777	True	NM_139174,NM_139353,NM_005679,NM_001145400	chr16,chr16,chr16,chr16	+,-,-,+	ADAD2,TAF1C,TAF1C,ADAD2	-4807,-8817,-8817,-4807
chr20:3826619-3827127	chr20	+	3826780	3827120	True	NM_001810,NM_020746,NR_037922,NR_037921	chr20,chr20,chr20,chr20	-,+,+,+	CENPB,MAVS,MAVS,MAVS	-59443,325,325,325
chr19:45148801-45149488	chr19	+	45149103	45149529	True	NM_006505,NM_001135770,NM_001135769,NM_001135768,NR_027754	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	PVR,PVR,PVR,PVR,CEACAM22P	-2067,-2067,-2067,-2067,-88953
chr6:10416094-10416391	chr6	+	10416194	10416439	True	NM_001032280,NM_001042425,NM_003220,NR_033910	chr6,chr6,chr6,chr6	-,-,-,+	TFAP2A,TFAP2A,TFAP2A,LOC100130275	-3587,3413,-724,-3695
chr2:70526823-70528097	chr2	+	70527311	70527973	True	NM_032822,NM_003096,NM_016297	chr2,chr2,chr2	-,-,+	FAM136A,SNRPG,PCYOX1	1299,-6442,-42131
chr4:37026627-37027857	chr4	+	37026840	37027638	True	NM_001085399,NM_001144990	chr4,chr4	-,+	RELL1,KIAA1239	660411,219051
chr18:74846590-74846833	chr18	+	74846635	74846867	True	NM_001480,NM_001025101,NM_001025100	chr18,chr18,chr18	+,-,-	GALR1,MBP,MBP	115140,-1861,-1861
chr11:125034002-125034257	chr11	+	125034012	125034205	True	NM_001080546,NM_022062	chr11,chr11	-,+	TMEM218,PKNOX2	-60807,353
chr16:88704919-88705395	chr16	+	88704933	88705325	True	NM_013278,NM_000101	chr16,chr16	+,-	IL17C,CYBA	17,12182
chr21:32433933-32434232	chr21	+	32434069	32434278	True	NM_001128077,NM_001099219	chr21,chr21	+,-	KRTAP20-3,KRTAP19-8	-418945,-23274
chr11:35639223-35639651	chr11	+	35639370	35639540	True	NM_015430,NM_014344	chr11,chr11	-,+	PAMR1,FJX1	-92194,194
chrX:100806963-100807363	chrX	+	100807061	100807327	True	NM_001009584,NM_016608	chrX,chrX	-,+	ARMCX6,ARMCX1	65714,-1598
chr9:88349665-88351069	chr9	+	88350107	88351018	True	NR_029410,NM_015239	chr9,chr9	+,-	LOC389765,AGTPBP1	69898,5983
chr17:65736647-65737479	chr17	+	65736797	65737000	True	NR_003706,NM_181655	chr17,chr17	+,-	SNORA38B,C17orf58	-70,252820
chr2:202901098-202901420	chr2	+	202901313	202901393	True	NM_001005781,NM_003507	chr2,chr2	-,+	SUMO1,FZD7	201979,-2054
chr17:77703451-77704275	chr17	+	77703505	77704307	True	NM_178543,NM_020649	chr17,chr17	+,-	ENPP7,CBX8	574,66658
chr10:60026335-60027207	chr10	+	60026395	60026918	True	NM_018464,NM_152230	chr10,chr10	+,-	CISD1,IPMK	1976,826
chr17:74072104-74072364	chr17	+	74072171	74072401	True	NM_180990,NM_003857,NM_014230	chr17,chr17,chr17	+,+,-	ZACN,GALR2,SRP68	2861,-1330,-3564
chr14:105951652-105952633	chr14	+	105951751	105952681	True	NM_001311,NM_001519,NM_001198983,NM_001134876,NM_001134877,NM_001134875	chr14,chr14,chr14,chr14,chr14,chr14	+,-,+,+,+,+	CRIP1,BRF1,C14orf80,C14orf80,C14orf80,C14orf80	575,-184422,3510,4904,3838,4904
chr12:105501599-105501924	chr12	+	105501599	105501877	True	NR_027752,NM_015275	chr12,chr12	-,+	ALDH1L2,KIAA1033	-23258,-158
chr19:44716731-44717290	chr19	+	44716898	44717321	True	NM_004234,NM_182490	chr19,chr19	-,+	ZNF235,ZNF227	91907,-258
chr12:85306449-85306664	chr12	+	85306484	85306680	True	NM_001146335,NM_018057,NM_182767,NM_032165	chr12,chr12,chr12,chr12	-,-,-,+	SLC6A15,SLC6A15,SLC6A15,LRRIQ1	0,0,0,123418
chr7:75544761-75545020	chr7	+	75544918	75544980	True	NM_031925,NM_000941	chr7,chr7	-,+	TMEM120A,POR	79062,-549
chr2:219265691-219266323	chr2	+	219266034	219266314	True	NM_022152,NM_021198,NR_029500,NM_182642	chr2,chr2,chr2,chr2	-,+,+,+	TMBIM1,CTDSP1,MIR26B,CTDSP1	-108754,-1607,1054,-1271
chr6:43029276-43030141	chr6	+	43029349	43029912	True	NM_015950,NM_001168370,NM_014780,NM_201521,NM_201523,NM_201522,NM_138343	chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,+,+,+,+	MRPL2,CUL7,CUL7,KLC4,KLC4,KLC4,KLC4	-2107,-7666,-7666,-2028,-1771,-1218,-2028
chr7:143078910-143079112	chr7	+	143078981	143079161	True	NM_001010972,NM_001031690,NM_003461	chr7,chr7,chr7	+,-,+	ZYX,FAM131B,ZYX	-672,-19141,-672
chr17:79881451-79881666	chr17	+	79881454	79881658	True	NM_002359,NM_016538,NR_015454,NM_032711	chr17,chr17,chr17,chr17	-,-,+,-	MAFG,SIRT7,LOC92659,MAFG	3980,-5396,4046,-46
chr16:12070822-12071305	chr16	+	12070873	12071353	True	NM_001130007,NM_032167	chr16,chr16	-,+	GSPT1,RUNDC2A	-60354,-322
chr11:67057890-67059188	chr11	+	67057894	67059126	True	NM_021173,NR_030767,NM_207354	chr11,chr11,chr11	-,+,+	POLD4,ANKRD13D,ANKRD13D	61976,-1129,-1183
chr4:2760537-2761642	chr4	+	2760552	2761375	True	NM_001122681,NM_001161527,NM_024309	chr4,chr4,chr4	+,-,-	SH3BP2,TNIP2,TNIP2	33374,-2800,-2449
chr14:62168909-62169853	chr14	+	62169200	62169787	True	NM_001530,NM_001017970,NM_181054	chr14,chr14,chr14	+,-,+	HIF1A,TMEM30B,HIF1A	-7139,-420670,-7139
chr20:46127541-46127983	chr20	+	46127604	46128033	True	NM_006534,NM_001174088,NM_001174087,NM_181659,NM_183048	chr20,chr20,chr20,chr20,chr20	+,+,+,+,-	NCOA3,NCOA3,NCOA3,NCOA3,ZMYND8	2567,2567,2567,2567,-142130
chr17:66913130-66915017	chr17	+	66913443	66914603	True	NM_007168,NM_212472	chr17,chr17	-,+	ABCA8,PRKAR1A	36980,-404951
chr8:12610718-12611561	chr8	+	12610767	12611513	True	NM_152271,NR_037495	chr8,chr8	-,+	LONRF1,MIR3926-2	1529,-26081
chr2:131975430-131975891	chr2	+	131975574	131975658	True	NM_001009993,NM_001083538	chr2,chr2	-,+	FAM168B,POTEE	-124570,265
chr2:131975430-131975891	chr2	-	130878389	130878473	False	NM_001099771,NR_033903	chr2,chr2	-,+	POTEF,LOC285103	8372,8722
chr15:98418235-98418913	chr15	+	98418356	98418806	True	NM_183376,NR_024172,NR_024173	chr15,chr15,chr15	+,-,-	ARRDC4,LOC91948,LOC91948	85126,-697,-697
chr1:145519360-145519883	chr1	+	145519494	145519884	True	NR_002328,NM_003846,NM_001184795,NM_003637	chr1,chr1,chr1,chr1	-,+,+,+	GNRHR2,PEX11B,PEX11B,ITGA10	-3418,-3380,-2985,5105
chr18:30043825-30045443	chr18	+	30044251	30045469	True	NR_003558,NM_022751	chr18,chr18	+,-	WBP11P1,FAM59A	46156,5028
chr6:12717339-12717885	chr6	+	12717691	12717927	True	NM_001143964,NM_030948	chr6,chr6	-,+	TBC1D7,PHACTR1	610911,16
chr14:55034539-55034827	chr14	+	55034659	55034825	True	NM_004124,NM_015589,NM_001161576	chr14,chr14,chr14	-,+,+	GMFB,SAMD4A,SAMD4A	-78915,-73,-73
chr1:53794758-53794971	chr1	+	53794815	53794901	True	NM_004631,NM_033300,NM_033067,NM_001018054,NM_017522	chr1,chr1,chr1,chr1,chr1	-,-,+,-,-	LRP8,LRP8,DMRTB1,LRP8,LRP8	-1089,-994,130170,-1089,-1089
chr6:150176722-150178387	chr6	+	150176866	150178089	True	NM_025217,NM_032832	chr6,chr6	+,-	ULBP2,LRP11	85046,7441
chr19:8481080-8481609	chr19	+	8481340	8481443	True	NM_016496,NM_001005416,NM_001005415,NM_198471	chr19,chr19,chr19,chr19	+,+,+,-	MARCH2,MARCH2,MARCH2,KANK3	-3211,-3211,-3211,-73194
chr15:94854412-94856273	chr15	+	94854692	94855932	True	NM_018349,NR_034095	chr15,chr15	+,-	MCTP2,LOC400456	-13313,1014447
chr10:97316465-97317241	chr10	+	97316781	97317219	True	NM_024991,NM_015385,NM_001098175	chr10,chr10,chr10	-,-,+	SORBS1,SORBS1,ENTPD1	4004,4004,154316
chr14:37667457-37668449	chr14	+	37667528	37668457	True	NM_138731,NM_030631,NM_001195297,NM_001195296	chr14,chr14,chr14,chr14	+,-,+,+	MIPOL1,SLC25A21,MIPOL1,MIPOL1	-461,-25663,-461,-461
chr19:33863126-33863353	chr19	+	33863293	33863401	True	NM_001806,NM_004364	chr19,chr19	+,-	CEBPG,CEBPA	1207,-69863
chr5:15514856-15515245	chr5	+	15514867	15515279	True	NM_054027,NM_012304	chr5,chr5	-,+	ANKH,FBXL7	-642980,-14613
chr16:30620893-30621105	chr16	+	30620895	30621105	True	NM_138447,NM_024031	chr16,chr16	-,+	ZNF689,PRR14	627,41135
chr10:104953229-104954586	chr10	+	104953461	104954271	True	NM_012229,NM_001134373,NM_001143909	chr10,chr10,chr10	-,-,+	NT5C2,NT5C2,LOC729020	-405,-405,51372
chr13:52378546-52379111	chr13	+	52378551	52379137	True	NM_031290,NM_001031719,NM_024705	chr13,chr13,chr13	+,-,-	CCDC70,DHRS12,DHRS12	56979,-317,-258
chr9:116118707-116120138	chr9	+	116118806	116119944	True	NM_145241,NM_017688	chr9,chr9	-,+	WDR31,BSPRY	-16186,-7045
chr5:72794259-72794649	chr5	+	72794364	72794652	True	NM_004472,NM_001037637,NM_001207	chr5,chr5,chr5	-,+,+	FOXD1,BTF3,BTF3	-50012,-165,-165
chr14:35100634-35101112	chr14	+	35100803	35101042	True	NR_002937,NM_021249,NM_152233	chr14,chr14,chr14	+,-,-	C14orf19,SNX6,SNX6	308085,-1488,-1437
chr13:99402457-99403302	chr13	+	99402704	99403000	True	NM_005073,NM_001144072	chr13,chr13	-,+	SLC15A1,UBAC2	1979,449678
chr9:117158765-117159388	chr9	+	117158979	117159414	True	NM_030767,NM_000608	chr9,chr9	-,+	AKNA,ORM2	-2294,-66961
chr19:45004189-45004582	chr19	+	45004255	45004623	True	NM_001205280,NM_013256	chr19,chr19	+,-	LOC147710,ZNF180	112316,1
chr19:55792164-55793045	chr19	+	55792323	55793050	True	NM_032430,NM_012267,NM_001130106	chr19,chr19,chr19	+,-,-	BRSK1,HSPBP1,HSPBP1	2483,-572,-572
chr7:100183068-100183428	chr7	+	100183152	100183334	True	NM_033506,NM_002319,NM_001163499,NM_012172	chr7,chr7,chr7,chr7	+,-,+,+	FBXO24,LRCH4,FBXO24,FBXO24	621,492,3861,3861
chrX:150344703-150345265	chrX	+	150344705	150345313	True	NR_036256,NM_134446,NM_004224	chrX,chrX,chrX	+,-,+	MIR4330,CD99L2,GPR50	-8062,-277416,115
chr13:113811825-113812069	chr13	+	113811875	113812000	True	NM_001127202,NM_003891	chr13,chr13	-,+	PCID2,PROZ	51080,967
chr3:52019153-52020309	chr3	+	52019580	52020124	True	NM_000992,NM_001198898,NM_001198896,NM_000666,NM_001198895,NM_001198897	chr3,chr3,chr3,chr3,chr3,chr3	-,+,+,+,+,+	RPL29,ACY1,ACY1,ACY1,ACY1,ACY1	9884,-2331,-2331,-2331,-2331,-2331
chr20:31592659-31593865	chr20	+	31593011	31593879	True	NM_025227,NM_080675	chr20,chr20	+,-	BPIL1,SUN5	1527,-772
chr4:157996893-157997399	chr4	+	157996894	157997022	True	NM_000824,NR_036641,NM_001166060,NM_001166061	chr4,chr4,chr4,chr4	+,-,+,+	GLRB,PDGFC,GLRB,GLRB	254,-104348,532,254
chr1:114407388-114408020	chr1	+	114407550	114407823	True	NM_012411,NR_037864,NM_001193431,NM_015967	chr1,chr1,chr1,chr1	-,+,-,-	PTPN22,LOC100287722,PTPN22,PTPN22	6609,-8350,6609,6609
chr1:145438451-145438888	chr1	+	145438503	145438936	True	NM_006472,NM_032305	chr1,chr1	+,-	TXNIP,POLR3GL	-92,31501
chr8:56791863-56792197	chr8	+	56791894	56792153	True	NM_002350,NM_152417,NM_001111097	chr8,chr8,chr8	+,-,+	LYN,TMEM68,LYN	232,-106009,232
chr22:32871609-32873494	chr22	+	32871608	32873537	True	NM_174932,NM_012179,NM_001033024	chr22,chr22,chr22	-,+,+	BPIL2,FBXO7,FBXO7	-18235,-952,-435
chr19:1648423-1648630	chr19	+	1648496	1648600	True	NM_003200,NM_001136139,NM_001080488	chr19,chr19,chr19	-,-,+	TCF3,TCF3,ONECUT3	3776,1736,105061
chr1:53533511-53534551	chr1	+	53533701	53534401	True	NM_153703,NM_006671,NM_001199082,NM_001199080,NM_001199081	chr1,chr1,chr1,chr1,chr1	+,-,+,+,+	PODN,SLC1A7,PODN,PODN,PODN	-6028,73938,-6028,-6028,-5867
chr11:49210037-49212011	chr11	+	49210703	49211983	True	NM_001014986,NR_027044	chr11,chr11	-,+	FOLH1,LOC440040	18297,368096
chr17:7655409-7657187	chr17	+	7655704	7656948	True	NR_002778,NM_001126114	chr17,chr17	+,-	RPL29P2,TP53	689,-64841
chr1:248003085-248004496	chr1	+	248003086	248004469	True	NM_015431,NM_001001959	chr1,chr1	+,-	TRIM58,OR11L1	16031,779
chr17:2235850-2237829	chr17	+	2236475	2237689	True	NR_003072,NR_003073,NM_014853,NM_018128,NM_001098509	chr17,chr17,chr17,chr17,chr17	-,-,+,-,+	SNORD91A,SNORD91B,SGSM2,TSR1,SGSM2	-2811,-3971,3116,3047,3118
chr9:92097522-92099017	chr9	+	92097547	92098902	True	NM_006378,NM_006705,NM_001142287	chr9,chr9,chr9	-,+,-	SEMA4D,GADD45G,SEMA4D	-2936,121024,-2936
chr6:15980231-15981903	chr6	+	15980347	15981713	True	NM_013262,NR_036448	chr6,chr6	+,-	MYLIP,DTNBP1	147603,-317058
chr12:33047320-33048795	chr12	+	33047319	33048641	True	NM_001005242,NM_004572,NM_012063	chr12,chr12,chr12	-,-,+	PKP2,PKP2,DNM1L	1197,1197,-215233
chr14:81685095-81685718	chr14	+	81685171	81685754	True	NM_201595,NM_015859,NM_000369	chr14,chr14,chr14	-,-,+	GTF2A1,GTF2A1,TSHR	1871,1590,-263360
chr20:61191423-61193062	chr20	+	61191441	61192844	True	NR_033263,NR_029676	chr20,chr20	-,+	C20orf200,MIR133A2	-42673,-29388
chr3:183946460-183946751	chr3	+	183946459	183946673	True	NM_005787,NM_138345	chr3,chr3	-,+	ALG3,VWA5B2	20136,1643
chr3:193714016-193715088	chr3	+	193714316	193715014	True	NR_027764,NR_033944,NM_005524	chr3,chr3,chr3	-,-,+	LOC100128023,LOC647323,HES1	-2289,6484,138916
chr4:25552173-25553056	chr4	+	25552179	25553106	True	NM_015187,NM_001177998	chr4,chr4	-,+	SEL1L3,SLC34A2	311555,104328
chr18:48330345-48331454	chr18	+	48330355	48331150	True	NM_001168335,NM_001127175	chr18,chr18	+,-	ME2,MRO	74281,15335
chr12:50898253-50898742	chr12	+	50898350	50898706	True	NM_173602,NM_001145475	chr12,chr12	+,-	DIP2B,FAM186A	61,-107945
chr1:201084993-201085372	chr1	+	201085020	201085342	True	NM_000069,NM_001164586	chr1,chr1	-,+	CACNA1S,IGFN1	-3326,74610
chr10:48413902-48414219	chr10	+	48413982	48414252	True	NM_016204,NM_153034	chr10,chr10	-,+	GDF2,ZNF488	2651,-58944
chr16:2909655-2910393	chr16	+	2909883	2910357	True	NM_001142499,NM_022119	chr16,chr16	+,-	FLYWCH2,PRSS22	22838,-1712
chr19:8009292-8009521	chr19	+	8009509	8009573	True	NM_006351,NR_030717	chr19,chr19	-,+	TIMM44,SNAPC2	-801,-23693
chr2:217558021-217558987	chr2	+	217558109	217558908	True	NM_000597,NM_000599	chr2,chr2	+,-	IGFBP2,IGFBP5	-60033,1415
chr1:89628520-89629494	chr1	+	89629153	89629481	True	NM_198460,NM_207398	chr1,chr1	+,-	GBP6,GBP7	199954,12300
chr1:92101626-92103278	chr1	+	92101737	92103188	True	NM_001017975,NR_003130	chr1,chr1	-,+	HFM1,HSP90B3P	-231311,-1220
chr1:109204202-109204804	chr1	+	109204283	109204817	True	NM_001102592,NM_144584,NM_018061	chr1,chr1,chr1	-,-,+	HENMT1,HENMT1,PRPF38B	-539,-135,30114
chrX:133370100-133371068	chrX	+	133370457	133370945	True	NM_001101357,NR_029523	chrX,chrX	+,-	CCDC160,MIR106A	131,-66149
chr11:102741891-102742627	chr11	+	102741890	102742675	True	NM_002426,NM_001080463	chr11,chr11	-,+	MMP12,DYNC2H1	3139,237484
chr15:85118400-85120223	chr15	+	85118845	85120271	True	NM_017894,NR_003661	chr15,chr15	+,-	ZSCAN2,UBE2Q2P1	23977,-4819
chr14:55907415-55907655	chr14	+	55907476	55907570	True	NM_004986,NM_199047	chr14,chr14	+,-	KTN1,TBPL2	139354,-213
chr12:14133755-14133992	chr12	+	14133942	14134002	True	NM_000834,NM_018179	chr12,chr12	-,+	GRIN2B,ATF7IP	-920,384608
chr9:79070431-79071744	chr9	+	79070439	79071459	True	NM_018339,NM_001490,NM_001097633	chr9,chr9,chr9	-,+,+	RFK,GCNT1,GCNT1	-60995,2608,2608
chr12:102216114-102217784	chr12	+	102216207	102217819	True	NM_018370,NM_024312	chr12,chr12	+,-	DRAM1,GNPTAB	53285,6876
chr1:29551876-29552400	chr1	+	29551888	29552207	True	NM_016011,NM_001195001,NM_001024732	chr1,chr1,chr1	-,+,-	MECR,PTPRU,MECR	5297,10820,5297
chr22:48974170-48974508	chr22	+	48974261	48974479	True	NR_033377,NM_015381	chr22,chr22	-,+	FLJ46257,FAM19A5	-946943,-2194
chrY:9163397-9163648	chrY	+	9163477	9163537	True	NR_001546,NR_001547,NM_001164471	chrY,chrY,chrY	-,-,+	TTTY20,RBMY1A3P,TSPY4	8954,-2994,31914
chr6:3159566-3160028	chr6	+	3159679	3160049	True	NM_001069,NR_026650	chr6,chr6	-,+	TUBB2A,BPHL	-1896,-40804
chr20:33680568-33680797	chr20	+	33680572	33680812	True	NM_006404,NM_015638,NM_199368	chr20,chr20,chr20	+,-,-	PROCR,TRPC4AP,TRPC4AP	78961,46,46
chr8:22437482-22437940	chr8	+	22437484	22437918	True	NR_027715,NM_198042,NM_176871,NM_021630	chr8,chr8,chr8,chr8	-,+,+,+	FLJ14107,PDLIM2,PDLIM2,PDLIM2	61854,68,68,-1281
chr6:31370435-31370992	chr6_qbl_hap6	+	2663951	2664433	False	NM_001177519,NM_000247,NR_036523,NR_036524,NM_005514	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	+,+,+,+,-	MICA,MICA,MICA,MICA,HLA-B	383,383,-2995,-2083,-45446
chr6:31370435-31370992	chr6	+	31370505	31370987	True	NM_001177519,NM_000247,NR_036523,NR_036524,NM_005514	chr6,chr6,chr6,chr6,chr6	+,+,+,+,-	MICA,MICA,MICA,MICA,HLA-B	383,383,-2995,-2083,-45516
chr6:31370435-31370992	chr6_mann_hap4	+	2716939	2717421	False	NM_001177519,NM_000247,NR_036523,NR_036524,NM_005514	chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4	+,+,+,+,-	MICA,MICA,MICA,MICA,HLA-B	383,383,-2993,-2081,-45495
chr6:31370435-31370992	chr6_ssto_hap7	+	2704302	2704784	False	NM_001177519,NM_000247,NR_036523,NR_036524,NM_005514	chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7	+,+,+,+,-	MICA,MICA,MICA,MICA,HLA-B	383,383,-2994,-2082,-45554
chr6:31370435-31370992	chr6_cox_hap2	+	2883204	2883686	False	NM_001177519,NM_000247,NR_036523,NR_036524,NM_005514	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,+,+,+,-	MICA,MICA,MICA,MICA,HLA-B	383,383,-2998,-2086,-45527
chrX:150862749-150863033	chrX	+	150862769	150862970	True	NR_029973,NR_033262,NM_024082	chrX,chrX,chrX	-,+,+	MIR452,PRRG3,PRRG3	265265,3808,759
chr1:48346868-48348612	chr1	+	48347006	48348467	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	114148,339889
chr1:10533634-10534488	chr1	+	10533832	10534448	True	NM_213566,NM_004565,NM_004401	chr1,chr1,chr1	-,+,-	DFFA,PEX14,DFFA	-1219,554,-1219
chr1:207072629-207073665	chr1	+	207072844	207073674	True	NM_001185157,NM_001185156,NM_001185158,NM_006850,NM_001193338	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	IL24,IL24,IL24,IL24,FAIM3	-2107,-2107,-2107,-2107,21611
chr4:141444362-141444894	chr4	+	141444453	141444938	True	NM_021833,NM_153702	chr4,chr4	-,+	UCP1,ELMOD2	45078,373
chr2:23679985-23680603	chr2	+	23680031	23680603	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	469381,-71784
chr14:29243969-29244183	chr14	+	29243969	29244153	True	NM_002742,NR_026731,NR_026732,NM_005249	chr14,chr14,chr14,chr14	-,+,+,+	PRKD1,C14orf23,C14orf23,FOXG1	1152796,-2112,-2112,-7735
chrX:47968021-47969237	chrX	+	47968755	47969267	True	NM_001205103,NR_028366,NR_033730	chrX,chrX,chrX	+,+,-	LOC100509575,SSX6,ZNF630	-1429,-1439,-37730
chr2:172555301-172557300	chr2	+	172556507	172557116	True	NM_003705,NM_001378	chr2,chr2	-,+	SLC25A12,DYNC1I2	193752,-12578
chr6:105578202-105579930	chr6	+	105578271	105579770	True	NM_007073,NR_037157,NM_001199563,NM_147147	chr6,chr6,chr6,chr6	-,+,-,-	BVES,C6orf112,BVES,BVES	4824,5791,5330,4502
chr3:46918354-46919064	chr3	+	46918425	46919105	True	NM_000316,NM_001184744,NM_000258	chr3,chr3,chr3	+,+,-	PTH1R,PTH1R,MYL3	130,4633,-13452
chr1:6238396-6238614	chr1	+	6238472	6238662	True	NM_207396,NM_015557	chr1,chr1	+,-	RNF207,CHD5	27526,1582
chr11:71639700-71640587	chr11	+	71639767	71640637	True	NR_024147,NR_029192,NR_024148,NM_018320	chr11,chr11,chr11,chr11	+,-,+,+	RNF121,LOC100133315,RNF121,RNF121	-50,-274,-50,-50
chr3:15250248-15250676	chr3	+	15250252	15250396	True	NM_014296,NR_027927	chr3,chr3	+,-	CAPN7,COL6A4P1	-2572,-2786
chr16:69958999-69960800	chr16	+	69959309	69960796	True	NR_029681,NM_199424,NR_003610	chr16,chr16,chr16	+,+,-	MIR140,WWP2,PDXDC2P	6187,-459,139112
chr1:239843246-239844994	chr1	+	239843259	239844798	True	NM_000740,NM_022469	chr1,chr1	+,-	CHRM3,GREM2	-50937,930727
chr2:73493599-73494609	chr2	+	73494150	73494626	True	NR_029403,NM_001080410	chr2,chr2	+,-	CCT7,FBXO41	-32839,2182
chr17:29888726-29889492	chr17	+	29888911	29889431	True	NR_029710,NM_014210	chr17,chr17	+,-	MIR193A,EVI2A	-1947,-240144
chr17:16474848-16475263	chr17	+	16474904	16475172	True	NM_014695,NM_020653	chr17,chr17	+,-	CCDC144A,ZNF287	118466,-2384
chr22:19512416-19512940	chr22	+	19512470	19512978	True	NM_001130861,NM_003277,NM_003504	chr22,chr22,chr22	-,-,+	CLDN5,CLDN5,CDC45	34,34,-45105
chr22:41032690-41032983	chr22	+	41032744	41032898	True	NM_020831,NM_005297	chr22,chr22	-,+	MKL1,MCHR1	-54,42283
chr2:242209592-242210423	chr2	+	242209595	242210333	True	NM_203346,NM_001008491	chr2,chr2	-,+	HDLBP,SEPT2	2018,44389
chr19:49530209-49530809	chr19	+	49530660	49530734	True	NR_004383,NM_000737,NM_033378,NM_033377,NR_024244	chr19,chr19,chr19,chr19,chr19	+,-,+,-,-	SNAR-G1,CGB,CGB2,CGB1,SNAR-G2	9542,-3067,4395,9507,4360
chr12:123756923-123757335	chr12	+	123756926	123757354	True	NM_001143905,NM_004642	chr12,chr12	+,-	C12orf65,CDK2AP1	-38686,-239
chr3:159093448-159095114	chr3	+	159093714	159095072	True	NM_002888,NR_037483	chr3,chr3	-,+	RARRES1,MIR3919	-643439,-93339
chr13:21834970-21835261	chr13	+	21835124	21835202	True	NM_145061,NM_024026	chr13,chr13	-,+	SKA3,MRP63	-84383,-84803
chr16:25269058-25269350	chr16	+	25269105	25269334	True	NM_001012981,NM_001169	chr16,chr16	-,+	ZKSCAN2,AQP8	-250,-40871
chrX:134556959-134557489	chrX	+	134557358	134557428	True	NR_024359,NM_007131	chrX,chrX	+,-	NCRNA00086,ZNF75D	-1541,-127393
chr4:85773421-85774205	chr4	+	85773420	85774257	True	NM_014991,NR_015359	chr4,chr4	-,+	WDFY3,NCRNA00247	113343,113713
chr2:62732542-62732757	chr2	+	62732553	62732762	True	NM_198276,NM_001142615	chr2,chr2	-,+	TMEM17,EHBP1	892,168223
chr6:27368673-27369131	chr6	+	27368744	27369120	True	NM_001076781,NR_024553	chr6,chr6	+,-	ZNF391,ZNF204P	-12271,-25591
chr6:167537136-167537571	chr6	+	167537175	167537619	True	NM_005299,NM_031409	chr6,chr6	-,+	GPR31,CCR6	33750,-992
chrX:102761987-102763739	chrX	+	102762237	102763459	True	NM_001006935,NM_080879	chrX,chrX	+,-	TCEAL4,RAB40A	76959,11015
chr4:13404712-13405299	chr4	+	13404765	13405300	True	NM_001017979,NR_003132	chr4,chr4	-,+	RAB28,HSP90AB2P	80746,-69787
chr8:11930087-11931233	chr8	+	11930086	11931056	True	NM_001195257,NM_001037804,NM_001039615	chr8,chr8,chr8	-,-,+	LOC100133267,DEFB130,ZNF705D	-830,-830,15790
chr8:11930087-11931233	chr8	+	12176655	12177625	False	NM_001195257,NM_001037804,NR_026789	chr8,chr8,chr8	-,-,+	LOC100133267,DEFB130,FAM66A	-830,-830,41902
chr11:3184044-3184277	chr11	+	3184043	3184313	True	NM_001144063,NM_020896,NM_145638,NR_027138	chr11,chr11,chr11,chr11	-,-,-,+	OSBPL5,OSBPL5,OSBPL5,C11orf36	2319,2319,2319,55248
chr4:88929644-88929932	chr4	+	88929648	88929973	True	NM_000297,NM_004827	chr4,chr4	+,-	PKD2,ABCG2	-901,150088
chr6:158245088-158245995	chr6	+	158245157	158245998	True	NM_016224,NM_032861	chr6,chr6	+,-	SNX9,SERAC1	-914,343364
chr4:40634727-40635078	chr4	+	40634807	40635072	True	NM_001098634,NM_024677	chr4,chr4	-,+	RBM47,NSUN7	-2924,116841
chr7:110754954-110756026	chr7	+	110754955	110755685	True	NM_032549,NM_018334	chr7,chr7	-,+	IMMP2L,LRRN3	446720,-23951
chr9:74763381-74764328	chr9	+	74763428	74764218	True	NM_004293,NM_001128618	chr9,chr9	+,-	GDA,C9orf57	74,-87907
chr1:155893962-155894908	chr1	+	155894265	155894367	True	NM_014949,NR_002974,NM_181885,NR_003005	chr1,chr1,chr1,chr1	-,-,+,-	KIAA0907,SNORA42,RXFP4,SCARNA4	9875,-4432,17112,1564
chr2:143885173-143885578	chr2	+	143885288	143885593	True	NM_018460,NM_018557	chr2,chr2	+,-	ARHGAP15,LRP1B	1305,-996018
chr7:27136242-27136464	chr7	+	27136286	27136434	True	NM_005522,NM_153620,NM_006735,NR_002795	chr7,chr7,chr7,chr7	-,-,-,+	HOXA1,HOXA1,HOXA2,HOXA11-AS1	-661,-661,6010,88592
chr5:40834327-40834769	chr5	+	40834387	40834790	True	NM_032587,NR_002583,NR_037665,NM_000997	chr5,chr5,chr5,chr5	+,-,-,-	CARD6,SNORD72,LOC100506548,RPL37	6619,-1550,-5143,652
chr11:86667654-86667904	chr11	+	86667669	86667953	True	NM_012193,NM_001168724	chr11,chr11	-,+	FZD4,TMEM135	-1236,80932
chr4:156300301-156302216	chr4	+	156300557	156302232	True	NM_000910,NM_001039580	chr4,chr4	+,-	NPY2R,MAP9	-170827,-2435
chr12:66554865-66556309	chr12	+	66555351	66556308	True	NM_016056,NM_001142523	chr12,chr12	-,+	TMBIM4,IRAK3	7556,26669
chr15:83953763-83954303	chr15	+	83953768	83954186	True	NM_003027,NM_001717	chr15,chr15	+,-	SH3GL3,BNC1	161904,-300
chr22:31362480-31364387	chr22	+	31362944	31364433	True	NM_014941,NR_002323	chr22,chr22	-,+	MORC2,TUG1	43,1200
chr8:32450862-32451757	chr8	+	32451444	32451806	True	NM_001159999,NM_001159995,NM_032664,NM_001160001	chr8,chr8,chr8,chr8	+,+,-,+	NRG1,NRG1,FUT10,NRG1	1537,1537,878908,1537
chr11:787908-788135	chr11	+	788006	788180	True	NM_001004,NM_001191060,NM_024698,NM_016564	chr11,chr11,chr11,chr11	+,-,-,-	RPLP2,SLC25A22,SLC25A22,CEND1	21755,9865,8133,1996
chr19:35530480-35530891	chr19	+	35530533	35530939	True	NM_199037,NM_001037,NM_182983,NR_024561,NM_002151	chr19,chr19,chr19,chr19,chr19	+,+,+,-,+	SCN1B,SCN1B,HPN,LOC100128675,HPN	-8992,-8992,470,66286,470
chr11:2230588-2231146	chr11	+	2230929	2231137	True	NM_199293,NR_028044	chr11,chr11	-,+	TH,IGF2AS	-37894,-69222
chr1:15572226-15573037	chr1	+	15572239	15573085	True	NM_052929,NR_027136	chr1,chr1	+,-	FHAD1,C1orf126	682,-93279
chr15:71183385-71184325	chr15	+	71183433	71184125	True	NM_001199018,NM_020147,NM_001199017,NM_017691	chr15,chr15,chr15,chr15	+,-,+,+	LRRC49,THAP10,LRRC49,LRRC49	893,697,802,802
chr8:146171670-146173296	chr8	+	146171756	146173178	True	NM_001029976,NM_006958,NR_002807	chr8,chr8,chr8	-,-,+	ZNF16,ZNF16,TMED10P1	3146,3146,47072
chr13:96739000-96739663	chr13	+	96739007	96739678	True	NM_153456,NM_020121	chr13,chr13	+,-	HS6ST3,UGGT2	3414,-33271
chr10:80831408-80832725	chr10	+	80831442	80832559	True	NR_024429,NR_015429,NR_024431,NM_020338	chr10,chr10,chr10,chr10	-,-,-,+	LOC283050,LOC283050,LOC283050,ZMIZ1	-4237,-4237,-4237,-2705
chr11:10317343-10318063	chr11	+	10317471	10317793	True	NM_030962,NM_001124	chr11,chr11	-,+	SBF2,ADM	-1717,8848
chr16:71843440-71843879	chr16	+	71843518	71843756	True	NM_001128,NM_001137675,NM_001030007	chr16,chr16,chr16	-,+,-	AP1G1,ATXN1L,AP1G1	-542,36142,-542
chr19:8456861-8457259	chr19	+	8456879	8457241	True	NM_198471,NM_004218	chr19,chr19	-,+	KANK3,RAB11B	-48733,-1725
chr16:50405682-50406197	chr16	+	50405895	50406215	True	NM_001114,NM_013263,NM_001173984	chr16,chr16,chr16	+,-,-	ADCY7,BRD7,BRD7	-84123,-3050,-3050
chr4:128980939-128981744	chr4	+	128981122	128981638	True	NM_032239,NM_018078,NM_178043,NM_152778	chr4,chr4,chr4,chr4	+,+,+,-	LARP1B,LARP1B,LARP1B,MFSD8	864,864,864,-93983
chr14:89291298-89292768	chr14	+	89291428	89292769	True	NM_183387,NM_144596,NM_198310,NM_198309	chr14,chr14,chr14,chr14	-,+,+,+	EML5,TTC8,TTC8,TTC8	-32332,-509,-509,-509
chr19:10984924-10985591	chr19	+	10984924	10985399	True	NM_199141,NM_006858	chr19,chr19	+,-	CARM1,TMED1	-2722,-37941
chr12:124476987-124478203	chr12	+	124477089	124478241	True	NM_025140,NM_001204299	chr12,chr12	-,+	CCDC92,ZNF664-FAM101A	-19926,-19378
chr1:14073638-14075266	chr1	+	14073886	14075191	True	NM_001007257,NM_001010847	chr1,chr1	+,-	PRDM2,LRRC38	684,-233644
chr5:65219305-65220952	chr5	+	65219330	65220776	True	NR_028474,NM_001006600,NM_018695	chr5,chr5,chr5	-,+,+	LOC100303749,ERBB2IP,ERBB2IP	20675,1607,1607
chr5:125999517-125999774	chr5	+	125999516	125999582	True	NM_001202404,NM_207408	chr5,chr5	-,+	ALDH7A1,C5orf48	-68434,-32153
chr4:3074992-3075199	chr4	+	3074994	3075142	True	NM_002111,NM_003703	chr4,chr4	+,-	HTT,NOP14	1265,-109876
chr4:40630865-40631792	chr4	+	40631068	40631672	True	NM_001098634,NM_024677	chr4,chr4	-,+	RBM47,NSUN7	262,120241
chr20:3997029-3997377	chr20	+	3997258	3997426	True	NM_001134337,NR_029519,NM_001134338,NM_007219	chr20,chr20,chr20,chr20	-,+,-,-	RNF24,MIR103-2,RNF24,RNF24	-1042,-99168,-1042,-1204
chr3:45070461-45071303	chr3	+	45070697	45071331	True	NM_003278,NM_016598	chr3,chr3	+,-	CLEC3B,ZDHHC3	-2989,-53023
chr1:27709843-27710268	chr1	+	27710019	27710209	True	NM_207397,NM_005281,NM_003665,NM_173452	chr1,chr1,chr1,chr1	-,+,-,-	CD164L2,GPR3,FCN3,FCN3	-214,8942,-8704,-8704
chr16:71613778-71614768	chr16	+	71613937	71614571	True	NM_000353,NM_052858	chr16,chr16	-,+	TAT,MARVELD3	-2939,45498
chr9:80911815-80912034	chr9	+	80911817	80911993	True	NM_002072,NM_021154,NM_058179	chr9,chr9,chr9	-,+,+	GNAQ,PSAT1,PSAT1	-265598,65,65
chr16:2300525-2301114	chr16	+	2300610	2301163	True	NM_001374,NM_001178029,NM_001919	chr16,chr16,chr16	+,-,-	DNASE1L2,ECI1,ECI1	-14193,489,489
chr7:115889436-115890282	chr7	+	115889444	115890207	True	NM_152829,NM_012252	chr7,chr7	+,-	TES,TFEC	-26500,-218646
chr7:43763381-43764759	chr7	+	43763667	43764561	True	NM_000712,NM_018224	chr7,chr7	+,-	BLVRA,C7orf44	33710,4572
chr2:70486745-70487038	chr2	+	70486764	70486909	True	NM_016297,NM_022173	chr2,chr2	+,-	PCYOX1,TIA1	-1589,-10985
chr7:65577919-65579078	chr7	+	65577974	65579088	True	NR_024548,NM_001040647,NM_014478,NM_001040648,NM_001142414,NM_000181	chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,+,-	CRCP,CRCP,CRCP,CRCP,CRCP,GUSB	716,716,716,716,716,-130673
chr21:45660677-45660910	chr21	+	45660683	45660889	True	NM_000383,NM_015259	chr21,chr21	+,-	AIRE,ICOSLG	44873,-5
chr10:5527305-5528007	chr10	+	5527315	5527907	True	NM_017422,NM_005185,NM_005863	chr10,chr10,chr10	-,+,+	CALML5,CALML3,NET1	13676,39016,-38820
chr1:47610572-47611772	chr1	+	47610779	47611723	True	NM_005764,NM_001010969	chr1,chr1	-,+	PDZK1IP1,CYP4A22	44098,-7723
chr9:33477206-33477733	chr9	+	33477205	33477269	True	NM_022917,NR_003573,NM_139235	chr9,chr9,chr9	-,+,-	NOL6,ANXA2P2,NOL6	-3264,146953,-3264
chr12:67663693-67663922	chr12	+	67663879	67663971	True	NM_021150,NM_018448	chr12,chr12	-,+	GRIP1,CAND1	-590954,-869
chr17:880299-880901	chr17	+	880344	880761	True	NM_022463,NM_013337	chr17,chr17	-,+	NXN,TIMM22	2306,19595
chr9:135750010-135751131	chr9	+	135750032	135751054	True	NM_152572,NM_018956	chr9,chr9	-,+	AK8,C9orf9	3201,3235
chr8:123792867-123793186	chr8	+	123792968	123793185	True	NM_014943,NM_001134671	chr8,chr8	+,-	ZHX2,DERL1	715,261513
chr17:38467206-38467522	chr17	+	38467228	38467476	True	NM_000964,NM_001145301,NM_001145302,NM_152219	chr17,chr17,chr17,chr17	+,+,+,-	RARA,RARA,RARA,GJD3	-1856,6996,6996,53519
chr1:55013974-55014813	chr1	+	55013977	55014800	True	NM_015547,NM_147161,NM_176782	chr1,chr1,chr1	+,+,-	ACOT11,ACOT11,FAM151A	-221,-221,74451
chr19:55350914-55351751	chr19	+	55350983	55351397	True	NM_012314,NM_001127255	chr19,chr19	+,-	KIR2DS4,NLRP7	-6860,107526
chr9:80852190-80852739	chr9	+	80852269	80852667	True	NM_001098802,NM_002072,NM_032171	chr9,chr9,chr9	+,-,+	CEP78,GNAQ,CEP78	-1336,-206050,-1336
chr18:67957349-67957699	chr18	+	67957385	67957705	True	NM_173630,NM_004232	chr18,chr18	-,+	RTTN,SOCS6	-84423,-1308
chr14:53592578-53593176	chr14	+	53592730	53592878	True	NM_001160147,NM_145251	chr14,chr14	-,+	DDHD1,STYX	27224,-395902
chr20:20693742-20693997	chr20	+	20693793	20693997	True	NM_020343,NM_002196	chr20,chr20	-,+	RALGAPA2,INSM1	-527,-345079
chr10:72142661-72143004	chr10	+	72142674	72142838	True	NM_018239,NM_207119,NM_018205,NM_004096	chr10,chr10,chr10,chr10	-,-,-,+	LRRC20,LRRC20,LRRC20,EIF4EBP2	-292,-1260,-292,21022
chr17:40441518-40442906	chr17	+	40441720	40442806	True	NM_012448,NM_003152	chr17,chr17	-,+	STAT5B,STAT5A	-13296,-2206
chr17:1588152-1588376	chr17	+	1588181	1588423	True	NM_001163673,NM_006445	chr17,chr17	+,-	WDR81,PRPF8	31393,-5
chr19:57743562-57743954	chr19	+	57743566	57743982	True	NM_001012729,NM_001145078,NM_001023563,NM_001015878,NM_001015879,NM_003160	chr19,chr19,chr19,chr19,chr19,chr19	-,+,+,+,+,+	DUXA,ZNF805,ZNF805,AURKC,AURKC,AURKC	-64710,8070,8070,-1189,-1240,-1240
chr19:41860565-41860822	chr19	+	41860595	41860787	True	NM_030578,NM_001098825,NM_000660	chr19,chr19,chr19	-,+,-	B9D2,TMEM91,TGFB1	9341,9083,-764
chr1:245318350-245318644	chr1	+	245318411	245318593	True	NM_018012,NM_031844	chr1,chr1	+,-	KIF26B,HNRNPU	-175,-290584
chr8:8748407-8748717	chr8	+	8748408	8748754	True	NM_153332,NM_004225	chr8,chr8	+,-	ERI1,MFHAS1	111559,2427
chr4:189019449-189020490	chr4	+	189019904	189020418	True	NM_173553,NM_178556	chr4,chr4	-,+	TRIML2,TRIML1	6046,40179
chr5:110074421-110074643	chr5	+	110074465	110074690	True	NM_001039763,NM_138773	chr5,chr5	-,+	TMEM232,SLC25A46	-12015,63
chr6:166800748-166800948	chr6	+	166800907	166800976	True	NM_016098,NR_027284	chr6,chr6	-,+	BRP44L,LOC441177	-4421,-399919
chr20:37433371-37433643	chr20	+	37433381	37433659	True	NM_001172735,NR_027241,NM_015568	chr20,chr20,chr20	+,-,+	PPP1R16B,LOC388796,PPP1R16B	688,-369363,688
chr19:45056873-45058663	chr19	+	45056983	45058400	True	NM_001205280,NR_027754	chr19,chr19	+,-	LOC147710,CEACAM22P	58539,1800
chr10:134260201-134260402	chr10	+	134260246	134260420	True	NM_173541,NM_173575	chr10,chr10	+,-	C10orf91,STK32C	-1583,-138769
chr17:10632799-10633061	chr17	+	10632870	10632936	True	NM_001004313,NM_020233	chr17,chr17	-,+	TMEM220,C17orf48	760,-31994
chr9:124991188-124991539	chr9	+	124991202	124991558	True	NM_199160,NM_001173512,NM_014368	chr9,chr9,chr9	-,+,-	LHX6,MRRF,LHX6	-183,35323,-183
chr8:37442231-37443667	chr8	+	37442295	37443663	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	109637,161951
chr18:32557722-32558396	chr18	+	32557748	32558436	True	NM_001143827,NM_001143826,NM_001112734	chr18,chr18,chr18	+,+,-	MAPRE2,MAPRE2,ZSCAN30	-82,-907,311810
chr3:49468467-49469565	chr3	+	49468748	49469010	True	NR_028435,NM_022171,NM_000481,NM_032316,NM_001164712,NM_001164710,NM_001164711	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-,-	AMT,TCTA,AMT,NICN1,AMT,AMT,AMT	-8637,-19163,-8637,-1991,-8637,-8637,-8637
chr1:112050566-112050922	chr1	+	112050647	112050963	True	NM_020683,NM_174896,NM_000677	chr1,chr1,chr1	-,+,-	ADORA3,C1orf162,ADORA3	-3904,-34094,-3904
chr19:56510967-56511286	chr19	+	56510984	56511284	True	NM_176810,NM_153447	chr19,chr19	-,+	NLRP13,NLRP5	-67282,-9
chr22:37821763-37821999	chr22	+	37821830	37822008	True	NM_152243,NM_052906	chr22,chr22	+,-	CDC42EP1,ELFN2	134462,1547
chr21:45582154-45582413	chr21	+	45582191	45582461	True	NM_198155,NM_015259	chr21,chr21	+,-	C21orf33,ICOSLG	-28748,78423
chr17:73995932-73996297	chr17	+	73995994	73996318	True	NM_001258,NM_007292	chr17,chr17	+,-	CDK3,ACOX1	668,-20479
chr6:83775651-83775897	chr6	+	83775735	83775829	True	NM_001199942,NM_015018,NM_198920	chr6,chr6,chr6	+,+,-	DOPEY1,DOPEY1,UBE2CBP	1555,1555,-190
chr1:201436900-201437267	chr1	+	201436914	201437216	True	NM_012396,NR_026667	chr1,chr1	-,+	PHLDA3,RPS10P7	1133,51815
chr12:109026331-109027430	chr12	+	109026665	109027369	True	NM_003006,NM_213595	chr12,chr12	-,+	SELPLG,ISCU	351,-70431
chr2:74649358-74649641	chr2	+	74649363	74649603	True	NM_001145054,NM_032118	chr2,chr2	-,+	C2orf81,WDR54	-4519,-529
chr9:95644704-95645187	chr9	+	95645014	95645210	True	NM_001083536,NM_001007101,NM_031486	chr9,chr9,chr9	+,-,-	FGD3,ZNF484,ZNF484	64390,-4744,-4724
chr2:17723061-17724530	chr2	+	17723272	17724558	True	NM_003385,NM_001099218	chr2,chr2	+,-	VSNL1,RAD51AP2	-1523,-23566
chr3:125237436-125238565	chr3	+	125238006	125238542	True	NR_024250,NM_003794	chr3,chr3	+,-	LOC100125556,SNX4	396901,566
chr17:58213579-58214234	chr17	+	58213606	58214280	True	NM_000717,NR_027408	chr17,chr17	+,-	CA4,LOC653653	13021,-33326
chr14:102835325-102835816	chr14	+	102835393	102835672	True	NM_001177612,NM_001177611,NM_032630,NM_014844,NM_001172631	chr14,chr14,chr14,chr14,chr14	-,-,-,+,+	CINP,CINP,CINP,TECPR2,TECPR2	-6140,-6342,-6140,-6144,-6144
chr2:121224942-121225971	chr2	+	121225027	121226016	True	NM_002193,NR_027181	chr2,chr2	+,-	INHBB,LOC84931	-121359,-1102
chr11:5154520-5156190	chr11	+	5154622	5155663	True	NM_001001916,NM_001005160	chr11,chr11	+,-	OR52J3,OR52A5	-86924,-750
chr4:119830881-119831564	chr4	+	119830891	119831561	True	NM_133477,NM_014822	chr4,chr4	+,-	SYNPO2,SEC24D	-20953,-73565
chr17:63559963-63560526	chr17	+	63560103	63560565	True	NM_004655,NM_003835	chr17,chr17	-,+	AXIN2,RGS9	-2363,-426698
chr1:11159867-11160383	chr1	+	11159888	11160260	True	NM_007375,NM_002685,NM_001001998	chr1,chr1,chr1	+,-,-	TARDBP,EXOSC10,EXOSC10	-87260,50,50
chr1:23495318-23495706	chr1	+	23495446	23495584	True	NM_033631,NM_001142546,NR_036057	chr1,chr1,chr1	-,-,+	LUZP1,LUZP1,MIR3115	-95,-95,-124699
chr13:109279074-109280260	chr13	+	109279359	109280283	True	NM_001098268,NM_001198950	chr13,chr13	-,+	LIG4,MYO16	-408643,1287
chr4:15437886-15438310	chr4	+	15437927	15438349	True	NM_001193534,NM_031911	chr4,chr4	-,+	FBXL5,C1QTNF7	218736,-8349
chr3:52527521-52528134	chr3	+	52527610	52528158	True	NM_015136,NM_003280,NM_001134231	chr3,chr3,chr3	+,-,-	STAB1,TNNC1,NT5DC2	1197,-39553,39685
chr2:43308451-43309373	chr2	+	43308648	43309132	True	NR_027251,NM_006887	chr2,chr2	+,-	LOC100129726,ZFP36L2	145217,144663
chrX:77156605-77157330	chrX	+	77156642	77157203	True	NM_032121,NM_000052,NM_001866	chrX,chrX,chrX	-,+,+	MAGT1,ATP7A,COX7B	-5577,8990,-1743
chr20:23670045-23670947	chr20	+	23670236	23670959	True	NM_001899,NR_001279	chr20,chr20	-,+	CST4,CSTT	-574,-170504
chr1:229478853-229479089	chr1	+	229478948	229479044	True	NM_145257,NM_006542	chr1,chr1	-,+	C1orf96,SPHAR	-260,-38870
chr22:25388704-25389133	chr22	+	25388824	25389124	True	NM_001001663,NM_001145206	chr22,chr22	-,+	TMEM211,KIAA1671	-53510,34816
chr1:62783811-62784097	chr1	+	62783817	62784117	True	NM_181712,NM_001017415	chr1,chr1	-,+	KANK4,USP1	1016,117857
chr22:37416858-37417270	chr22	+	37417015	37417305	True	NM_001013436,NR_024038,NM_021126,NM_003312,NM_001130517	chr22,chr22,chr22,chr22,chr22	+,+,+,-,+	MPST,MPST,MPST,TST,MPST	-1369,-1369,-1369,-1524,-1369
chr20:18122432-18124430	chr20	+	18122829	18124097	True	NR_028402,NM_020536,NM_001164811,NM_021220	chr20,chr20,chr20,chr20	+,+,+,-	CSRP2BP,CSRP2BP,PET117,OVOL2	1645,-19,-4388,-84308
chr19:22190041-22190521	chr19	+	22190343	22190410	True	NM_007153,NM_033468	chr19,chr19	-,+	ZNF208,ZNF257	3392,44855
chr19:18357659-18357914	chr19	+	18357750	18357914	True	NM_000923,NR_036155,NR_036575	chr19,chr19,chr19	-,+,-	PDE4C,MIR3188,LOC729966	1146,34972,8365
chr12:131325177-131325757	chr12	+	131325336	131325755	True	NM_194356,NM_001980,NM_006325	chr12,chr12,chr12	-,-,+	STX2,STX2,RAN	-1525,-1525,30861
chr9:135456558-135457219	chr9	+	135456630	135457266	True	NM_022779,NM_020064	chr9,chr9	-,+	DDX31,BARHL1	88572,726
chr1:153890164-153891147	chr1	+	153890425	153891082	True	NM_130898,NM_020699	chr1,chr1	+,-	CREB3L4,GATAD2B	49314,4424
chr11:111957257-111957522	chr11	+	111957263	111957540	True	NR_028383,NM_003002,NM_012459	chr11,chr11,chr11	-,+,-	TIMM8B,SDHD,TIMM8B	32,30,32
chrX:41306205-41306446	chrX	+	41306221	41306339	True	NM_022567,NM_001126054	chrX,chrX	+,-	NYX,CASK	373,475998
chr5:61720467-61721394	chr5	+	61720628	61721145	True	NM_014473,NM_001134779	chr5,chr5	-,+	DIMT1L,IPO11	-20900,-5969
chr5:62074922-62076558	chr5	+	62074967	62076527	True	NM_181506,NM_014473	chr5,chr5	+,-	LRRC70,DIMT1L	-200465,-375239
chr3:51574912-51576638	chr3	+	51575184	51576388	True	NM_015106,NM_014703	chr3,chr3	+,-	RAD54L2,VPRBP	-95,-41166
chr2:56412915-56413135	chr2	+	56412976	56413162	True	NM_001080433,NR_030623	chr2,chr2	+,-	CCDC85A,MIR216B	-1769,-185046
chr9:95824384-95825013	chr9	+	95824492	95825062	True	NM_004148,NM_145006	chr9,chr9	-,+	NINJ1,SUSD3	71558,-3554
chr4:186696630-186697781	chr4	+	186696848	186697748	True	NM_001145673,NM_003265	chr4,chr4	-,+	SORBS2,TLR3	6,292560
chr1:36614168-36614635	chr1	+	36614249	36614591	True	NM_014408,NM_018067	chr1,chr1	-,+	TRAPPC3,MAP7D1	534,7211
chrX:132096399-132098039	chrX	+	132096398	132098046	True	NM_001077188,NM_001042452,NM_147175	chrX,chrX,chrX	-,+,-	HS6ST2,MST4,HS6ST2	-975,-938813,-975
chr1:154305834-154306269	chr1	+	154306012	154306122	True	NM_020452,NM_138740,NM_001005855	chr1,chr1,chr1	+,-,+	ATP8B2,C1orf43,ATP8B2	-5787,-112739,-8027
chr10:102266095-102267059	chr10	+	102266252	102267075	True	NM_017902,NM_015490	chr10,chr10	+,-	HIF1AN,SEC31B	28565,12571
chr4:152018916-152019821	chr4	+	152019168	152019544	True	NR_000007,NM_001006,NM_001128924	chr4,chr4,chr4	+,+,-	SNORD73A,RPS3A,SH3D19	5434,1209,77210
chr11:131168700-131170356	chr11	+	131168714	131169776	True	NM_001048209,NM_014758	chr11,chr11	+,-	NTM,SNX19	70594,-382332
chr1:32756644-32757466	chr1	+	32756863	32757459	True	NM_023009,NM_004964	chr1,chr1	-,+	MARCKSL1,HDAC1	44425,248
chr3:197888326-197889332	chr7	-	26471	27277	False	NM_002607,NM_020223	chr7,chr7	-,+	PDGFA,FAM20C	532263,165691
chr3:197888326-197889332	chr11	-	185408	186134	False	NM_001097610,NM_145651,NM_001098787	chr11,chr11,chr11	+,+,-	LOC653486,SCGB1C1,BET1L	6945,6945,21345
chr3:197888326-197889332	chr3	+	197888326	197889132	True	NR_003291	chr3	-	LOC348840	-80784
chr3:197888326-197889332	chr16	+	90176903	90177711	False	NM_001098173,NR_023348	chr16,chr16	-,+	PRDM7,GAS8	-34565,-87955
chr3:197888326-197889332	chr9	+	141115568	141116373	False	NM_032937	chr9	-	C9orf37	-602260
chr3:73043494-73044546	chr3	+	73043714	73044116	True	NM_174907,NM_018130	chr3,chr3	+,-	PPP4R2,SHQ1	2002,-146116
chr17:78193676-78193979	chr17	+	78193736	78193798	True	NM_000199,NM_173626,NM_001166349,NM_001166348,NM_001166347	chr17,chr17,chr17,chr17,chr17	-,+,+,+,+	SGSH,SLC26A11,SLC26A11,SLC26A11,SLC26A11	451,401,401,401,401
chr9:35491359-35491694	chr9	+	35491402	35491634	True	NM_014806,NM_001099951	chr9,chr9	+,-	RUSC2,FAM166B	-1446,72312
chr1:13494836-13496754	chr1	+	13494971	13496449	True	NM_001045480,NM_001099850	chr1,chr1	+,-	PRAMEF16,PRAMEF18	-180,-17402
chr1:13494836-13496754	chr1	+	13715805	13717283	False	NM_001099850,NM_001099851	chr1,chr1	-,+	PRAMEF18,PRAMEF17	-17400,-180
chr3:184080033-184080343	chr3	+	184080033	184080297	True	NM_004366,NM_001171087,NM_001171088,NM_001171089,NM_006232	chr3,chr3,chr3,chr3,chr3	-,-,-,-,+	CLCN2,CLCN2,CLCN2,CLCN2,POLR2H	-642,-642,-642,-642,896
chr5:113788353-113789692	chr5	+	113788434	113789225	True	NM_170775,NM_018700	chr5,chr5	+,-	KCNN2,TRIM36	-19258,727080
chr1:171625213-171625539	chr1	+	171625275	171625546	True	NM_001007239,NM_000261	chr1,chr1	+,-	METTL13,MYOC	125214,-3502
chr4:68565617-68566470	chr4	+	68565711	68566479	True	NR_015439,NM_018227	chr4,chr4	+,-	LOC550112,UBA6	516,460
chrX:30234358-30234717	chrX	+	30234364	30234666	True	NM_000475,NM_002364	chrX,chrX	-,+	NR0B1,MAGEB2	92879,-740
chr3:178861273-178863192	chr3	+	178861424	178862906	True	NM_152240,NM_006218	chr3,chr3	-,+	ZMAT3,PIK3CA	-71768,3404
chr9:100685038-100685547	chr9	+	100685061	100685570	True	NM_016481,NM_006401	chr9,chr9	-,+	C9orf156,ANP32B	-209,59918
chr10:99788237-99788718	chr10	+	99788256	99788732	True	NM_014472,NM_018058	chr10,chr10	+,-	C10orf28,CRTAC1	105648,1903
chr12:122149775-122150256	chr12	+	122149935	122150244	True	NM_173855,NM_001080825	chr12,chr12	-,+	MORN3,TMEM120B	-42375,413
chr14:103009872-103010460	chr14	+	103009962	103010453	True	NM_152326,NR_036192	chr14,chr14	-,+	ANKRD9,MIR4309	-33834,-4032
chr1:16766001-16766429	chr1	+	16766216	16766341	True	NM_018090,NM_198546,NM_001145277,NM_001145278	chr1,chr1,chr1,chr1	+,-,+,+	NECAP2,SPATA21,NECAP2,NECAP2	825,-2297,825,825
chr1:17695960-17696864	chr1	+	17695985	17696843	True	NM_001136204,NM_207421	chr1,chr1	-,+	RCC2,PADI6	68264,1897
chr3:120626541-120626925	chr3	+	120626572	120626918	True	NM_173825,NM_014980	chr3,chr3	-,+	RABL3,STXBP5L	-165188,131
chr1:28505817-28506046	chr1	+	28505840	28506049	True	NM_016311,NM_001164723,NM_000952	chr1,chr1,chr1	+,-,-	ATPIF1,PTAFR,PTAFR	56552,-2656,-2385
chr17:61103673-61105432	chr17	+	61103736	61105450	True	NM_152598,NM_025185	chr17,chr17	-,+	MARCH10,TANC2	-218031,-16903
chr2:8111459-8113274	chr2	+	8111807	8113295	True	NM_002166,NR_015405	chr2,chr2	+,-	ID2,LOC339788	708817,3700
chr9:21975196-21976300	chr9	+	21975225	21976050	True	NR_024274,NM_001195132,NM_000077,NM_058197	chr9,chr9,chr9,chr9	+,-,-,-	C9orf53,CDKN2A,CDKN2A,CDKN2A	-8138,-93,-93,-399
chr9:103791469-103791712	chr9	+	103791473	103791751	True	NM_207299,NM_001127610	chr9,chr9	+,-	LPPR1,BAAT	-493,354100
chr17:67704682-67706526	chr17	+	67705142	67706562	True	NM_172232,NM_002758	chr17,chr17	-,+	ABCA5,MAP2K6	-381819,-294368
chr2:191217047-191217755	chr2	+	191217107	191217791	True	NM_001128928,NM_198047,NM_002194	chr2,chr2,chr2	+,-,+	INPP1,HIBCH,INPP1	-8974,-32336,-8974
chr19:58516829-58518111	chr19	+	58517134	58517913	True	NR_036508,NM_025027	chr19,chr19	+,-	LOC100128398,ZNF606	-2930,-2420
chr8:144654555-144654797	chr8	+	144654611	144654769	True	NM_145201,NM_024736,NM_001100878	chr8,chr8,chr8	-,+,-	NAPRT1,GSDMD,C8orf73	5794,-14185,209
chr19:45457454-45457872	chr19	+	45457698	45457917	True	NM_001199468,NM_001294,NM_000483,NM_145288	chr19,chr19,chr19,chr19	+,+,+,-	CLPTM1,CLPTM1,APOC2,ZNF296	681,681,-8510,121822
chr11:72975794-72976273	chr11	+	72975817	72976151	True	NM_014824,NM_176797,NM_176796,NM_176798,NM_004154	chr11,chr11,chr11,chr11,chr11	-,+,+,+,+	FCHSD2,P2RY6,P2RY6,P2RY6,P2RY6	-122674,-298,-298,4787,7095
chr2:170429987-170430385	chr2	+	170430055	170430427	True	NM_004792,NM_024622	chr2,chr2	+,-	PPIG,FASTKD1	10422,47
chr2:179713989-179715855	chr2	+	179714065	179715612	True	NM_019091,NM_133379	chr2,chr2	+,-	PLEKHA3,TTN	-368924,-41915
chr6:31974412-31974809	chr6_dbb_hap3	+	3260134	3260208	False	NR_001284,NM_001128590,NM_032454,NM_032470,NM_007293,NM_001002029,NM_000500,NM_004197	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	-,+,+,-,+,+,+,+	TNXA,CYP21A2,STK19,TNXB,C4A,C4B,CYP21A2,STK19	6225,-1243,6892,6475,7946,7946,-1243,6892
chr6:31974412-31974809	chr6	+	31974551	31974625	True	NR_001284,NM_001128590,NM_032454,NM_032470,NM_007293,NM_001002029,NM_000500,NM_004197	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,+,+,-,+,+,+,+	TNXA,CYP21A2,STK19,TNXB,C4A,C4B,CYP21A2,STK19	6225,-1243,6892,6475,7946,7946,-1243,6892
chr6:31974412-31974809	chr6_ssto_hap7	+	3307261	3307335	False	NR_001284,NM_001128590,NM_032454,NM_032470,NM_007293,NM_001002029,NM_000500,NM_004197	chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7	-,+,+,-,+,+,+,+	TNXA,CYP21A2,STK19,TNXB,C4A,C4B,CYP21A2,STK19	6225,-459,6892,6475,7946,7946,-459,6892
chr2:131438209-131439116	chr2	+	131438238	131439130	True	NR_023391,NM_001079530	chr2,chr2	+,-	C2orf14,CFC1B	-666,-80987
chr2:131438209-131439116	chr2	+	132045132	132045838	False	NR_030728,NM_001077637	chr2,chr2	+,-	LOC440910,LOC150786	-8321,75943
chr2:131438209-131439116	chr2	-	130807336	130807573	False	NR_026758,NM_032144	chr2,chr2	-,+	LOC440905,RAB6C	1181,-70153
chr2:131438209-131439116	chr2	-	131197540	131198432	False	NM_032357,NM_001079530	chr2,chr2	-,+	CCDC115,CFC1B	-97618,80234
chr9:127615453-127615784	chr9	+	127615472	127615750	True	NM_007209,NM_001045476	chr9,chr9	-,+	RPL35,WDR38	8540,4
chr7:1572928-1573300	chr7	+	1572961	1573292	True	NM_002360,NM_001097620	chr7,chr7	+,-	MAFK,TMEM184A	-2644,22824
chr19:36117766-36118279	chr19	+	36117960	36118184	True	NM_000704,NM_024321	chr19,chr19	-,+	ATP4A,RBM42	-63400,1795
chr19:55381767-55382678	chr19	+	55381856	55382670	True	NM_002000,NM_001127255,NM_133279,NM_133278,NM_133269,NM_133274,NM_133277,NM_133271,NM_133273,NM_133272	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+,+,+,+,+	FCAR,NLRP7,FCAR,FCAR,FCAR,FCAR,FCAR,FCAR,FCAR,FCAR	2878,76255,2878,2878,2878,2878,2878,2878,2878,2878
chrX:49460537-49462238	chrX	+	49460733	49462045	True	NM_003785,NM_001468	chrX,chrX	-,+	PAGE1,GAGE1	-137,-97168
chr18:1363523-1365281	chr18	+	1363641	1365308	True	NR_023926,NR_023927,NR_023925,NR_023928,NM_001117	chr18,chr18,chr18,chr18,chr18	-,-,-,-,+	C18orf2,C18orf2,C18orf2,C18orf2,ADCYAP1	-4011,-4011,-4011,-4011,-458408
chr19:44124517-44125604	chr19	+	44124548	44125163	True	NM_001145641,NM_182498	chr19,chr19	+,-	SRRM5,ZNF428	-8346,-534
chr12:121733496-121733854	chr12	+	121733495	121733869	True	NM_002560,NM_153500,NM_153499,NM_172214,NM_172215,NM_172216,NM_006549,NM_172226	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,-,-,-,-,-,-,-	P2RX4,CAMKK2,CAMKK2,CAMKK2,CAMKK2,CAMKK2,CAMKK2,CAMKK2	-85882,2292,2292,2292,2292,2292,2292,737
chr19:45280107-45281004	chr19	+	45280122	45280641	True	NM_012116,NR_027754,NM_001130852	chr19,chr19,chr19	+,-,+	CBLC,CEACAM22P,CBLC	484,-219972,484
chr17:46654363-46655094	chr17	+	46654526	46655119	True	NM_024015,NR_029608,NM_002146,NR_033201	chr17,chr17,chr17,chr17	-,-,-,+	HOXB4,MIR10A,HOXB3,LOC404266	674,2240,-2716,12703
chr12:117347356-117348661	chr12	+	117347481	117348596	True	NM_012174,NM_003806,NM_153348	chr12,chr12,chr12	+,-,+	FBXW8,HRK,FBXW8	164,-28249,164
chr1:247370308-247370615	chr1	+	247370463	247370587	True	NM_173858,NR_037480	chr1,chr1	+,-	VN1R5,MIR3916	48786,-5101
chr10:38672782-38672986	chr10	+	38672876	38673039	True	NR_027269,NR_003086	chr10,chr10	-,+	SEPT7L,HSD17B7P2	18798,-27631
chr10:38672782-38672986	chr1	+	162788148	162788229	False	NM_178550,NM_016371	chr1,chr1	-,+	C1orf110,HSD17B7	50433,-27712
chr19:53094727-53096608	chr19	+	53095221	53095843	True	NR_023311,NM_001105549	chr19,chr19	+,-	ZNF137P,ZNF83	4093,45851
chr16:4382560-4382835	chr16	+	4382563	4382743	True	NM_032575,NM_016069	chr16,chr16	+,-	GLIS2,PAM16	-389,18680
chr9:130565658-130565868	chr9	+	130565680	130565888	True	NM_001018078,NM_170600,NM_004957	chr9,chr9,chr9	+,-,+	FPGS,SH2D3C,FPGS	-223,-24632,-577
chr3:149897566-149899032	chr3	+	149897566	149898781	True	NM_053024,NR_036538	chr3,chr3	-,+	PFN2,LOC646903	-208825,-208560
chr5:32176384-32177549	chr5	+	32176489	32176755	True	NM_022130,NM_178140	chr5,chr5	-,+	GOLPH3,PDZD2	-2064,-377519
chr19:41883136-41883776	chr19	+	41883190	41883634	True	NM_001098824,NM_030578,NM_001098821,NM_001098822,NM_001098823,NM_001042595	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+	TMEM91,B9D2,TMEM91,TMEM91,TMEM91,TMEM91	-803,-13112,-803,-803,-803,-72
chr20:3800069-3800681	chr20	+	3800136	3800602	True	NM_001204447,NM_001204446,NM_001810,NM_018347	chr20,chr20,chr20,chr20	+,+,-,+	C20orf29,C20orf29,CENPB,C20orf29	568,568,-32799,568
chr1:156710373-156710735	chr1	+	156710376	156710752	True	NM_015997,NM_024540,NM_145729	chr1,chr1,chr1	+,-,-	RRNAD1,MRPL24,MRPL24	-12164,221,221
chr1:160312418-160312805	chr1	+	160312422	160312845	True	NM_004371,NM_015331,NM_001098398	chr1,chr1,chr1	-,+,-	COPA,NCSTN,COPA	559,217,559
chr5:176978101-176978938	chr5	+	176978324	176978893	True	NM_001190946,NM_017510,NR_024019	chr5,chr5,chr5	-,+,-	FAM193B,TMED9,FAM193B	2705,40319,2705
chr17:8277416-8277984	chr17	+	8277447	8277507	True	NM_213597,NM_000987,NM_153007	chr17,chr17,chr17	-,-,+	KRBA2,RPL26,ODF4	-2589,9108,-34310
chr7:45129993-45130755	chr7	+	45130127	45130557	True	NM_001146334,NM_001029835	chr7,chr7	-,+	NACAD,CCM2	-1634,-62958
chr6:31462699-31464234	chr6	+	31462719	31463217	True	NM_005931,NR_003140	chr6,chr6	+,-	MICB,SNORD117	2637,41067
chr6:31462699-31464234	chr6_apd_hap1	+	2777426	2777924	False	NM_005931,NR_003140	chr6_apd_hap1,chr6_apd_hap1	+,-	MICB,SNORD117	2637,41048
chr6:31462699-31464234	chr6_qbl_hap6	+	2661974	2756503	False	NM_005931,NM_005514	chr6_qbl_hap6,chr6_qbl_hap6	+,-	MICB,HLA-B	3070,-43469
chr6:31462699-31464234	chr6_ssto_hap7	+	2702322	2793601	False	NM_005931,NM_005514	chr6_ssto_hap7,chr6_ssto_hap7	+,-	MICB,HLA-B	3069,-43574
chr6:31462699-31464234	chr6_mcf_hap5	+	2842482	2842554	False	NM_005931,NR_003140	chr6_mcf_hap5,chr6_mcf_hap5	+,-	MICB,SNORD117	3062,41472
chrX:140273035-140274242	chrX	+	140273035	140274150	True	NM_145664,NM_012317	chrX,chrX	+,-	SPANXB2,LDOC1	-176325,-1725
chr15:83479258-83479582	chr15	+	83479267	83479630	True	NM_001007122,NM_001080435	chr15,chr15	-,+	FSD2,WHAMM	-4461,-1345
chr4:9213165-9214510	chr4	+	9213182	9214422	True	NM_001105662,NM_018942	chr4,chr4	+,-	USP17,HMX1	2708,-339639
chr10:46220745-46222430	chr10	+	46221054	46221710	True	NM_174890,NM_015262,NM_001169106,NM_001169107	chr10,chr10,chr10,chr10	-,+,+,+	ANUBL1,FAM21C,FAM21C,FAM21C	-52803,937,937,937
chr11:63382409-63383232	chr11	+	63382913	63383116	True	NM_006054,NM_001128203,NM_007069	chr11,chr11,chr11	+,-,-	RTN3,PLA2G16,PLA2G16	65805,-972,-1004
chr4:39033425-39033866	chr4	+	39033549	39033872	True	NM_024943,NM_001007075	chr4,chr4	-,+	TMEM156,KLHL5	226,12578
chr12:356640-357492	chr12	+	356692	357386	True	NM_001130147,NM_001190997	chr12,chr12	+,-	CCDC77,SLC6A13	141129,14710
chr19:40339233-40340699	chr19	+	40339475	40340537	True	NM_001143832,NM_001436	chr19,chr19	+,-	LEUTX,FBL	-72292,-2421
chr11:57504746-57506032	chr11	+	57505019	57505993	True	NM_001145101,NM_170746	chr11,chr11	-,+	BTBD18,C11orf31	13310,2728
chr17:9927784-9929398	chr17	+	9927887	9929162	True	NM_004246,NM_001130831	chr17,chr17	+,-	GLP2R,GAS7	-198557,511
chr13:27334490-27334744	chr13	+	27334533	27334793	True	NM_005288,NM_006646	chr13,chr13	-,+	GPR12,WASF3	179,-202744
chr19:40895012-40895431	chr19	+	40895267	40895431	True	NM_012268,NM_144685	chr19,chr19	+,-	PLD3,HIPK4	-40986,713
chr16:2572078-2572403	chr16	+	2572126	2572192	True	NR_036139,NM_001145815,NM_001198569,NM_001694,NM_001048212,NM_015944	chr16,chr16,chr16,chr16,chr16,chr16	-,+,+,+,-,+	MIR3178,AMDHD2,ATP6V0C,ATP6V0C,CEMP1,AMDHD2	9864,-1814,-8450,-8306,9267,-1814
chr15:38985045-38986109	chr15	+	38985392	38986106	True	NM_005739,NM_207444	chr15,chr15	-,+	RASGRP1,C15orf53	-128385,2692
chr4:2212502-2213309	chr4	+	2213017	2213232	True	NM_181808,NM_178557	chr4,chr4	-,+	POLN,NAT8L	17783,-151838
chr11:129111395-129112467	chr11	+	129111590	129112260	True	NM_001142685,NM_003658	chr11,chr11	-,+	ARHGAP32,BARX2	-49497,133620
chr1:160158493-160160045	chr1	+	160158569	160160057	True	NM_001231,NR_028106	chr1,chr1	+,-	CASQ1,DCAF8	227,72270
chr3:40521787-40522079	chr3	+	40521822	40521995	True	NM_001145083,NM_001145082,NR_033965,NM_001145093,NR_026746	chr3,chr3,chr3,chr3,chr3	+,+,-,+,+	ZNF619,ZNF619,FLJ33065,ZNF619,ZNF619	-3250,-3279,-170633,-3279,-3279
chr19:50922339-50922804	chr19	+	50922468	50922778	True	NM_003121,NM_004851	chr19,chr19	+,-	SPIB,NAPSA	-324,-53537
chr2:36943454-36944311	chr2	+	36943515	36944004	True	NM_053276,NM_005102	chr2,chr2	+,-	VIT,FEZ2	-19742,-118183
chr6:139263275-139264050	chr6	+	139263275	139263508	True	NM_001128617,NM_021243	chr6,chr6	-,+	REPS1,C6orf115	45947,86310
chr1:36186141-36187147	chr1	+	36186348	36186940	True	NM_017629,NM_152374	chr1,chr1	+,-	EIF2C4,C1orf216	86887,-1558
chrX:130413215-130414186	chrX	+	130413470	130414202	True	NM_001170961,NM_001170962,NM_001170963,NM_144967,NM_205833,NM_001555	chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,+,-,-	IGSF1,IGSF1,IGSF1,ARHGAP36,IGSF1,IGSF1	9251,9251,8883,-221306,9251,9251
chr5:178289960-178291387	chr5	+	178289964	178291431	True	NR_024035,NM_058230	chr5,chr5	-,+	AACSP1,ZNF354B	-86687,-3061
chr16:67907354-67907648	chr16	+	67907426	67907648	True	NM_014329,NM_025082	chr16,chr16	+,-	EDC4,CENPT	-478,-26065
chr1:55089957-55090791	chr1	+	55089963	55090827	True	NM_176782,NR_026782	chr1,chr1	-,+	FAM151A,HEATR8	-763,16599
chr3:42003422-42003725	chr3	+	42003440	42003734	True	NM_001042646,NM_017886	chr3,chr3	+,-	TRAK1,ULK4	129011,-24
chr15:69853691-69854202	chr15	+	69853695	69854158	True	NR_026979,NR_030714	chr15,chr15	+,-	LOC145837,MIR629	-100,517700
chr1:8082430-8083632	chr1	+	8082582	8083323	True	NM_007262,NM_018948	chr1,chr1	+,-	PARK7,ERRFI1	-60931,3125
chr17:72869845-72870669	chr17	+	72869984	72870502	True	NM_178160,NM_004110,NM_024417	chr17,chr17,chr17	+,-,-	OTOP2,FDXR,FDXR	49867,-828,-828
chr12:68722173-68723000	chr12	+	68722423	68723009	True	NM_020128,NM_017440,NM_001205028,NM_001205029,NM_001010942	chr12,chr12,chr12,chr12,chr12	-,-,-,-,+	MDM1,MDM1,MDM1,MDM1,RAP1B	3202,3202,3202,3202,281642
chr17:46609854-46611011	chr17	+	46609895	46610925	True	NM_002144,NR_033201	chr17,chr17	-,+	HOXB1,LOC404266	-1623,56897
chr12:4217514-4219278	chr12	+	4217581	4219277	True	NM_001759,NM_020367	chr12,chr12	+,-	CCND2,PARP11	163624,-234973
chr6:43458915-43459187	chr6	+	43458922	43458982	True	NM_001012974,NM_001146017	chr6,chr6	-,+	C6orf154,TJAP1	19492,-1651
chr18:8365760-8367272	chr18	+	8366040	8367259	True	NM_001025300,NR_024419	chr18,chr18	+,-	RAB12,LOC100192426	242183,-28
chr8:145515884-145516207	chr8	+	145515973	145516233	True	NM_005526,NM_015201	chr8,chr8	+,-	HSF1,BOP1	-754,-853
chr18:74726424-74726712	chr18	+	74726431	74726761	True	NM_007345,NM_002385,NM_001025081,NM_001025090,NM_001025092	chr18,chr18,chr18,chr18,chr18	+,-,-,-,-	ZNF236,MBP,MBP,MBP,MBP	-190366,2344,2344,2344,2344
chr8:42194401-42195524	chr8	+	42194645	42195523	True	NM_014420,NM_002690	chr8,chr8	-,+	DKK4,POLB	39201,506
chr3:51988026-51989558	chr3	+	51988157	51989126	True	NM_033010,NM_080865	chr3,chr3	-,+	PCBP4,GPR62	7834,203
chr16:20818461-20818943	chr16	+	20818517	20818613	True	NM_030941,NM_001142725,NM_080663,NM_001199053,NM_001144924	chr16,chr16,chr16,chr16,chr16	+,-,-,+,+	LOC81691,ERI2,ERI2,LOC81691,LOC81691	-802,-722,-722,-802,-802
chrX:118709231-118710270	chrX	+	118709507	118710284	True	NM_181762,NM_003336,NM_181777,NM_022101	chrX,chrX,chrX,chrX	+,+,+,-	UBE2A,UBE2A,UBE2A,CXorf56	-1059,-1059,4013,-10110
chr11:3695988-3697475	chr11	+	3696164	3697459	True	NM_004314,NM_020402	chr11,chr11	+,-	ART1,CHRNA10	-29854,-3550
chr5:16466430-16466920	chr5	+	16466436	16466772	True	NM_033414,NM_006317	chr5,chr5	-,+	ZNF622,BASP1	-542,750977
chr4:6473103-6473371	chr4	+	6473237	6473307	True	NM_020416,NM_015274	chr4,chr4	-,+	PPP2R2C,MAN2B2	1069,103594
chr19:51389066-51390100	chr19	+	51389122	51389822	True	NR_002948,NM_005551	chr19,chr19	-,+	KLKP1,KLK2	9882,-12484
chr17:17994143-17994871	chr17	+	17994281	17994628	True	NM_145691,NM_001388	chr17,chr17	-,+	ATPAF2,DRG2	-51801,-3061
chr14:32029439-32030544	chr14	+	32029704	32030533	True	NR_036675,NM_025152	chr14,chr14	-,+	GPR33,NUBPL	-72553,57
chr8:7416944-7417600	chr8	+	7417017	7417077	True	NM_001040705,NM_001136572	chr8,chr8	+,-	DEFB107B,FAM90A7	-63700,207
chr9:35601205-35603135	chr9	+	35601704	35602980	True	NM_001782,NM_006285	chr9,chr9	-,+	CD72,TESK1	15498,2300
chr3:122101794-122102442	chr3	+	122101882	122102428	True	NM_014367,NM_001017928	chr3,chr3	+,-	FAM162A,CCDC58	594,-110
chr7:143268920-143270569	chr7	+	143270165	143270563	True	NM_005232,NM_001008747	chr7,chr7	-,+	EPHA1,CTAGE15P	-164180,-1326
chr7:143268920-143270569	chr7	-	143453098	143453496	False	NM_178561,NM_001130026	chr7,chr7	-,+	CTAGE6P,FAM115C	1397,-40210
chr4:100750559-100751260	chr4	+	100750723	100751224	True	NM_021970,NM_014395	chr4,chr4	-,+	LAMTOR3,DAPP1	64538,-12800
chr10:134352739-134353059	chr10	+	134352787	134353107	True	NM_005539,NM_173575	chr10,chr10	+,-	INPP5A,STK32C	-1487,-231310
chr2:130956217-130956451	chr2	+	130956220	130956500	True	NM_025029,NM_207312	chr2,chr2	+,-	MZT2B,TUBA3E	-16770,-186
chr17:41835471-41835935	chr17	+	41835514	41835972	True	NM_025237,NM_001136483	chr17,chr17	-,+	SOST,C17orf105	234,21830
chr15:48009621-48009930	chr15	+	48009639	48009932	True	NM_016132,NM_024966,NM_153617,NM_153616,NM_153619,NM_153618,NM_020858	chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,+,+,+,+,+,+	MYEF2,SEMA6D,SEMA6D,SEMA6D,SEMA6D,SEMA6D,SEMA6D	460676,753,753,753,753,753,753
chr10:51749558-51750275	chr10	+	51750237	51750325	True	NM_001077665,NM_006327	chr10,chr10	+,-	AGAP6,TIMM23	-2210,-126901
chr10:51749558-51750275	chr10	-	46340490	46341007	False	NM_133446,NM_015262	chr10,chr10	-,+	AGAP4,FAM21C	2431,-118360
chr1:67774122-67774423	chr1	+	67774198	67774430	True	NM_001018067,NM_001559	chr1,chr1	-,+	SERBP1,IL12RB2	121743,-1202
chr2:207586058-207587897	chr2	+	207586121	207587820	True	NM_001093730,NM_001136193	chr2,chr2	-,+	DYTN,FASTKD2	-3001,42291
chr1:171654453-171655588	chr1	+	171654580	171655624	True	NM_001007239,NM_000261	chr1,chr1	+,-	METTL13,MYOC	95136,-32807
chr9:103103891-103105149	chr9	+	103104063	103105022	True	NM_001161584,NM_001198807	chr9,chr9	-,+	TEX10,C9orf30	9894,84472
chr9:100011889-100013355	chr9	+	100012368	100013358	True	NR_036529,NM_199005	chr9,chr9	+,-	LOC57653,ZNF322B	-11722,-50458
chr1:48289107-48289354	chr1	+	48289198	48289398	True	NM_001194986,NM_004474	chr1,chr1	-,+	LOC388630,FOXD2	173214,-387560
chr1:197163239-197164958	chr1	+	197163688	197164979	True	NM_001193640,NM_194314	chr1,chr1	+,-	CRB1,ZBTB41	72354,4753
chr1:809236-809467	chr4	-	190904018	190904068	True	NM_020040,NM_004477	chr4,chr4	-,+	TUBB4Q,FRG1	2006,-42095
chr17:56460077-56461348	chr17	+	56460088	56461332	True	NR_027647,NM_003168	chr17,chr17	+,-	LPO,SUPT4H1	-144352,-30525
chr2:128419492-128420968	chr2	+	128419539	128420732	True	NM_005291,NM_017980	chr2,chr2	+,-	GPR17,LIMS2	-16151,1485
chr3:180633237-180634076	chr3	+	180633303	180634062	True	NM_005087,NM_001190233,NM_001013438,NM_001013439	chr3,chr3,chr3,chr3	+,-,+,+	FXR1,DNAJC19,FXR1,FXR1	-3127,73294,-3127,-3127
chr11:56259733-56260103	chr11	+	56259864	56260112	True	NM_001005282,NM_001013356	chr11,chr11	-,+	OR5M8,OR8U8	-1018,-116824
chr11:56259733-56260103	chr11	+	56269773	56269823	False	NM_001005282,NM_001013356	chr11,chr11	-,+	OR5M8,OR8U8	-10927,-126724
chr14:95999994-96000439	chr14	+	95999998	96000410	True	NM_016417,NR_003002,NR_003138,NR_001459	chr14,chr14,chr14,chr14	+,-,-,-	GLRX5,SCARNA13,SNHG10,SNHG10	912,-32,849,849
chr19:18112757-18113068	chr19	+	18112853	18112913	True	NM_001025604,NM_015683,NM_005535	chr19,chr19,chr19	+,+,-	ARRDC2,ARRDC2,IL12RB1	-960,6063,84834
chr7:65219952-65221125	chr7	+	65220332	65221017	True	NR_003110,NM_000181,NR_002961	chr7,chr7,chr7	+,-,+	CCT6P1,GUSB,SNORA22	-4299,226347,-2
chr7:65219952-65221125	chr7	+	64526328	64526378	False	NR_033416,NM_001007253	chr7,chr7	+,-	CCT6P3,ERV3	-27647,-59204
chr5:140042310-140043663	chr5	+	140042386	140043248	True	NM_017706,NM_194249	chr5,chr5	+,-	WDR55,DND1	1135,9973
chr7:104005601-104005949	chr7	+	104005772	104005947	True	NM_199000,NM_181747	chr7,chr7	+,-	LHFPL3,ORC5	-36719,-157277
chr16:67965470-67966927	chr16	+	67965776	67966660	True	NM_006742,NM_001907,NM_002801	chr16,chr16,chr16	+,-,-	PSKH1,CTRL,PSMB10	-38652,2,4170
chr7:119403884-119404496	chr7	+	119403886	119404438	True	NM_012281,NM_012338	chr7,chr7	+,-	KCND2,TSPAN12	509283,1093789
chr20:61450992-61451666	chr20	+	61451148	61451576	True	NM_001853,NM_006602	chr20,chr20	+,-	COL9A3,TCFL5	-2785,41589
chr22:32146688-32147667	chr22	+	32146722	32147651	True	NM_001007188,NM_014662,NM_001136029,NM_173566	chr22,chr22,chr22,chr22	+,+,+,-	DEPDC5,DEPDC5,DEPDC5,PRR14L	2417,2417,3201,-602
chr17:37790882-37791517	chr17	+	37790882	37791565	True	NM_006160,NM_006804,NM_001165937,NM_181505,NM_001165938,NM_032192	chr17,chr17,chr17,chr17,chr17,chr17	-,+,+,+,+,+	NEUROD2,STARD3,STARD3,PPP1R1B,STARD3,PPP1R1B	-26707,1767,1767,-6184,1767,-7758
chr8:145132281-145133299	chr8	+	145132439	145132973	True	NM_003801,NM_017570,NM_019037	chr8,chr8,chr8	+,-,+	GPAA1,OPLAH,EXOSC4	4550,-16855,548
chr8:145745096-145745390	chr8	+	145745102	145745380	True	NM_001001795,NM_001024678,NM_014665,NM_004260	chr8,chr8,chr8,chr8	-,-,+,-	C8orf82,LRRC24,LRRC14,RECQL4	9128,7086,-1790,-1892
chr1:116962938-116963259	chr1	+	116962949	116963267	True	NR_024126,NR_024125,NR_024124,NM_001160234,NR_027646,NR_027645	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,-	ATP1A1OS,ATP1A1OS,ATP1A1OS,ATP1A1,ATP1A1OS,ATP1A1OS	-1768,-1744,-1752,-37008,-1705,-1752
chrX:68046711-68047765	chrX	+	68046767	68047803	True	NM_001032396,NM_004429	chrX,chrX	-,+	PJA1,EFNB1	337612,1036
chr8:141469522-141470863	chr8	+	141469629	141470732	True	NM_001160372,NM_017444,NM_031466	chr8,chr8,chr8	-,+,-	TRAPPC9,CHRAC1,TRAPPC9	-1768,50668,-951
chr10:70288815-70289804	chr10	+	70288821	70289610	True	NM_030625,NM_152707	chr10,chr10	+,-	TET1,SLC25A16	30506,-1541
chr12:5298352-5299560	chr12	+	5298508	5299594	True	NM_006422,NM_002234	chr12,chr12	-,+	AKAP3,KCNA5	-544165,-145474
chr4:83718646-83718904	chr4	+	83718763	83718949	True	NM_024672,NM_001037582,NM_024906	chr4,chr4,chr4	+,-,-	THAP9,SCD5,SCD5	102887,1111,1111
chr17:8091436-8091834	chr17	+	8091580	8091765	True	NM_017622,NR_037447	chr17,chr17	-,+	C17orf59,MIR3676	1850,-1138
chr6:32009259-32010176	chr6_qbl_hap6	+	3270406	3270474	False	NR_001284,NM_001128590,NM_000500,NM_032470	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	-,+,+,-	TNXA,CYP21A2,CYP21A2,TNXB	4284,-3310,-3310,4535
chr6:32009259-32010176	chr6_mcf_hap5	+	3389193	3389261	False	NM_001128590,NM_000500,NM_032470	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	+,+,-	CYP21A2,CYP21A2,TNXB	-3306,-3306,4535
chr6:32009259-32010176	chr6	+	32009352	32009420	True	NM_001128590,NM_000500,NM_032470	chr6,chr6,chr6	+,+,-	CYP21A2,CYP21A2,TNXB	-3310,-3310,4535
chr6:32009259-32010176	chr6_ssto_hap7	+	3342060	3342128	False	NM_001002029,NM_032470	chr6_ssto_hap7,chr6_ssto_hap7	+,-	C4B,TNXB	-26829,4535
chr6:32009259-32010176	chr6_cox_hap2	+	3480003	3480071	False	NR_001284,NM_001128590,NM_000500,NM_032470	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	-,+,+,-	TNXA,CYP21A2,CYP21A2,TNXB	4284,-3310,-3310,4535
chr13:103392738-103393334	chr13	+	103392798	103393362	True	NM_001159596,NM_001146197	chr13,chr13	+,-	BIVM,C13orf40	58036,18110
chr6:70584176-70584497	chr6	+	70584268	70584367	True	NM_018368,NM_001858	chr6,chr6	-,+	LMBRD1,COL19A1	-77219,-7882
chr12:120720273-120720940	chr12	+	120720377	120720824	True	NM_002859,NM_012240	chr12,chr12	-,+	PXN,SIRT4	-16814,19299
chr11:108192229-108193174	chr11	+	108192687	108192842	True	NM_000051,NM_002519	chr11,chr11	+,-	ATM,NPAT	-99189,-99322
chr17:55981401-55981928	chr17	+	55981618	55981756	True	NM_080677,NM_017949	chr17,chr17	+,-	DYNLL2,CUEDC1	179023,-868
chr11:62531059-62531507	chr11	+	62531076	62531555	True	NM_002696,NM_006473,NM_024784	chr11,chr11,chr11	+,+,-	POLR2G,TAF6L,ZBTB3	-2128,7319,-9420
chrX:53076792-53077251	chrX	+	53076793	53077271	True	NM_018969,NM_014138	chrX,chrX	+,-	GPR173,FAM156A	1234,-90617
chr17:6925164-6925403	chr17	+	6925356	6925418	True	NR_030178,NM_174893,NM_001004333,NM_001142798,NM_001142799,NR_037715,NR_037716,NR_037717,NR_029712,NM_181844	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,+,+,+,+,+,+,-,+	MIR497,C17orf49,RNASEK,C17orf49,C17orf49,RNASEK,RNASEK,RNASEK-C17ORF49,MIR195,BCL6B	-4015,-7351,-9671,-7351,-7351,-9671,-9671,-9671,-4336,950
chr10:30328337-30328537	chr10	+	30328349	30328585	True	NM_020848,NM_005204	chr10,chr10	-,+	KIAA1462,MAP3K8	19953,394280
chr9:141043662-141044176	chr18	-	74146	74202	False	NM_005131,NR_033770	chr18,chr18	-,+	THOC1,ROCK1P1	193912,34862
chr9:141043662-141044176	chr9	+	141043854	141043916	True	NM_032937,NR_027156	chr9,chr9	-,+	C9orf37,TUBBP5	-530546,648
chr19:1514677-1515451	chr19	+	1514799	1515225	True	NR_026557,NM_213604	chr19,chr19	+,-	PLK5P,ADAMTSL5	8852,-1611
chr16:50406197-50406868	chr16	+	50406377	50406845	True	NM_001114,NM_013263,NM_001173984	chr16,chr16,chr16	+,-,-	ADCY7,BRD7,BRD7	-84605,-3532,-3532
chr9:114932045-114933148	chr9	+	114932317	114932940	True	NM_022486,NM_001195822	chr9,chr9	-,+	SUSD1,HSDL2	4669,209248
chr16:81113702-81114431	chr16	+	81113762	81114219	True	NM_152337,NM_015251,NM_001100873	chr16,chr16,chr16	-,+,-	C16orf46,ATMIN,C16orf46	-2890,-44357,-2890
chr9:130056874-130057338	chr9	+	130056937	130057396	True	NM_032293,NR_002449	chr9,chr9	+,-	GARNL3,SNORA65	-30239,153579
chr6:2989812-2990053	chr6	+	2989817	2990068	True	NR_026855,NR_026856,NM_004568,NM_000904	chr6,chr6,chr6,chr6	+,+,-,+	DKFZP686I15217,DKFZP686I15217,SERPINB6,NQO2	-1667,-1667,-17418,9998
chr15:25640170-25640474	chr15	+	25640174	25640516	True	NM_130838,NR_001295	chr15,chr15	-,+	UBE3A,SNORD109A	10187,-116735
chr6:110300615-110300851	chr6	+	110300690	110300872	True	NM_001024934,NM_005284	chr6,chr6	-,+	WASF1,GPR6	200385,-443
chr9:129093934-129094712	chr9	+	129093933	129094710	True	NM_001006618,NM_001011703,NM_033446	chr9,chr9,chr9	-,+,+	MAPKAP1,FAM125B,FAM125B	-624420,-4858,-4858
chr4:148603006-148603620	chr4	+	148603068	148603149	True	NM_024605,NM_138364	chr4,chr4	+,-	ARHGAP10,PRMT10	50303,2190
chr20:37243927-37244173	chr20	+	37243929	37244201	True	NM_001164431,NR_027241	chr20,chr20	+,-	ARHGAP40,LOC388796	-13403,-179911
chr8:86126016-86127794	chr8	+	86126016	86127663	True	NM_001099672,NM_001099673,NM_001099670,NM_001099671,NM_001083589	chr8,chr8,chr8,chr8,chr8	-,-,-,-,+	C8orf59,C8orf59,C8orf59,C8orf59,E2F5	5031,5031,5031,5031,-26166
chr11:22855500-22856520	chr11	+	22855570	22856554	True	NM_005256,NM_148893	chr11,chr11	+,-	GAS2,SVIP	-159314,-4188
chr4:2933717-2934849	chr4	+	2933731	2934623	True	NR_015453,NM_001120,NM_001146069	chr4,chr4,chr4	+,-,-	C4orf10,MFSD10,MFSD10	2654,1391,2013
chr12:49110237-49110581	chr12	+	49110315	49110615	True	NM_001240,NR_029448	chr12,chr12	-,+	CCNT1,LOC255411	216,10602
chr11:65404413-65405056	chr11	+	65404441	65405093	True	NM_002419,NM_006747,NM_153253	chr11,chr11,chr11	-,+,+	MAP3K11,SIPA1,SIPA1	-22721,484,2498
chr14:20115498-20117043	chr22	+	16383142	16384721	False	NM_001005239,NR_001591	chr22,chr22	-,+	OR11H1,psiTPTE22	65133,698079
chr14:20115498-20117043	chr14	+	20115502	20117078	True	NM_001197287,NM_172194	chr14,chr14	-,+	OR11H2,OR4Q3	65463,98508
chr14:20115498-20117043	chr14	-	19448581	19448631	False	NM_001145442,NM_001013354	chr14,chr14	-,+	POTEM,OR11H12	571691,-71038
chr3:33265613-33267459	chr3	+	33265790	33267476	True	NM_012157,NM_015551	chr3,chr3	+,-	FBXL2,SUSD5	51457,-5083
chr13:41833760-41835185	chr13	+	41833968	41835018	True	NM_001110798,NM_004294	chr13,chr13	+,-	NAA16,MTRF1	50322,2746
chr15:43779117-43779710	chr15	+	43779176	43779719	True	NM_002373,NM_001141980,NM_001141979	chr15,chr15,chr15	+,-,-	MAP1A,TP53BP1,TP53BP1	30086,5686,5686
chr4:48833412-48835191	chr4	+	48833549	48834950	True	NM_001079842,NM_001079841,NM_001079840,NM_015030,NM_001168254,NM_001079839,NM_017830	chr4,chr4,chr4,chr4,chr4,chr4,chr4	+,+,+,-,+,+,+	OCIAD1,OCIAD1,OCIAD1,FRYL,OCIAD1,OCIAD1,OCIAD1	-356,-540,-540,-51233,-277,-356,-540
chr6:127780303-127782182	chr6	+	127780332	127782075	True	NM_014702,NM_001010905	chr6,chr6	-,+	KIAA0408,C6orf58	-95,116243
chr20:56287575-56288823	chr20	+	56287711	56288759	True	NM_020182,NM_199169,NM_002591,NM_199170,NM_199171	chr20,chr20,chr20,chr20,chr20	-,-,+,-,-	PMEPA1,PMEPA1,PCK1,PMEPA1,PMEPA1	-2680,-2086,-151625,-2086,-1170
chr17:58230009-58231195	chr17	+	58230085	58231035	True	NM_000717,NR_027408	chr17,chr17	+,-	CA4,LOC653653	-2841,-49805
chr1:162527476-162528006	chr1	+	162527480	162527680	True	NM_053282,NM_003115	chr1,chr1	-,+	SH2D1B,UAP1	-145552,3615
chr10:95327652-95327882	chr10	+	95327667	95327859	True	NM_001195755,NM_181745,NM_006744	chr10,chr10,chr10	+,+,-	O3FAR1,O3FAR1,RBP4	-1296,-1296,33184
chr6:26022022-26022584	chr6	+	26022022	26022542	True	NM_005325,NM_003537,NM_003544,NM_003529,NM_003538	chr6,chr6,chr6,chr6,chr6	-,-,-,+,+	HIST1H1A,HIST1H3B,HIST1H4B,HIST1H3A,HIST1H4A	-3982,9796,4988,-1355,-166
chr19:49891100-49891389	chr19	+	49891239	49891423	True	NM_144688,NM_003598	chr19,chr19	+,-	CCDC155,TEAD2	51,-25525
chr4:1975778-1976028	chr4	+	1975797	1975947	True	NR_030641,NR_003004	chr4,chr4	-,+	MIR943,SCARNA22	12309,415
chr21:30671851-30672493	chr21	+	30671875	30672541	True	NR_027655,NM_206866,NM_006585,NM_001186	chr21,chr21,chr21,chr21	+,+,-,+	BACH1,BACH1,CCT8,BACH1	5018,-189,-225865,-706
chr19:39234825-39235076	chr19	+	39234892	39235116	True	NM_144691,NM_001042507	chr19,chr19	-,+	CAPN12,LGALS7B	48,44733
chrX:102528795-102529149	chrX	+	102528799	102528907	True	NM_152278,NM_001012979	chrX,chrX	+,-	TCEAL7,TCEAL5	56206,2946
chr1:104291743-104292685	chr1	+	104291884	104292699	True	NM_001008221,NM_004038,NM_001008218,NM_001008219	chr1,chr1,chr1,chr1	+,+,+,+	AMY1A,AMY1A,AMY1B,AMY1C	-65,36,59,37
chr1:104291743-104292685	chr1	+	104197746	104198561	False	NM_001008221,NM_004038,NM_001008218,NM_001008219	chr1,chr1,chr1,chr1	+,+,+,+	AMY1A,AMY1A,AMY1B,AMY1C	-65,36,59,37
chr1:104291743-104292685	chr1	-	104238652	104239467	False	NM_001008221,NM_004038,NM_001008218,NM_001008219	chr1,chr1,chr1,chr1	-,-,-,-	AMY1A,AMY1A,AMY1B,AMY1C	65,-36,-59,-37
chr20:54968050-54968253	chr20	+	54968098	54968294	True	NM_003600,NM_198433,NM_198434,NM_198435,NM_198436,NM_198437,NM_001033522,NM_001033521,NM_001324	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	-,-,-,-,-,-,+,+,+	AURKA,AURKA,AURKA,AURKA,AURKA,AURKA,CSTF1,CSTF1,CSTF1	-747,-747,-747,-747,-747,-747,-442,-722,-575
chr12:2167449-2167934	chr12	+	2167527	2167963	True	NM_001129834,NM_001129835,NM_001129836,NM_001129837,NM_001129830,NM_001129831,NM_001129832,NM_001129833,NM_001129838,NM_001129839,NM_199460,NM_001129841,NM_001129840,NM_001129843,NM_001129842,NM_001129844,NM_001129846,NM_001129827,NM_152640,NM_001129829,NM_000719,NM_001167623,NM_001167625,NM_001167624	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,-,+,+,+,+,+	CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,DCP1B,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C	-5163,-5163,-5163,-5163,-5163,-5163,-5163,-5163,-5163,-5163,-5163,-5163,-5163,-5163,-5163,-5163,-5163,-5163,-53850,-5163,-5163,-5163,-5163,-5163
chr10:71929662-71929880	chr10	+	71929719	71929921	True	NM_001142648,NM_018649,NM_020150	chr10,chr10,chr10	-,+,-	SAR1A,H2AFY2,SAR1A	414,-117413,414
chr1:7916147-7916840	chr1	+	7916329	7916831	True	NM_006786,NM_021995,NM_016831	chr1,chr1,chr1	-,-,+	UTS2,UTS2,PER3	-3225,-2778,-71626
chr19:47614696-47615153	chr19	+	47614749	47615130	True	NM_015168,NM_001145713	chr19,chr19	-,+	ZC3H4,SAE1	1929,18949
chr10:73633425-73633717	chr10	+	73633426	73633734	True	NM_001171936,NM_002778	chr10,chr10	+,-	CDH23,PSAP	-61837,-22344
chr4:183061876-183062323	chr4	+	183061941	183062353	True	NR_031640,NR_027107	chr4,chr4	+,-	MIR1305,MGC45800	28092,3365
chr2:217562382-217563012	chr2	+	217562577	217563059	True	NM_000597,NM_000599	chr2,chr2	+,-	IGFBP2,IGFBP5	-64502,-2305
chr20:42217108-42217576	chr20	+	42217280	42217417	True	NM_016004,NM_001008901	chr20,chr20	+,-	IFT52,GTSF1L	2161,138284
chr19:53358404-53359878	chr19	+	53358478	53359674	True	NM_199132,NM_152473,NM_001008801	chr19,chr19,chr19	-,+,-	ZNF468,HERV-V1,ZNF468	1278,157669,1278
chr21:43374346-43375581	chr21	+	43374424	43375580	True	NM_015500,NR_027273	chr21,chr21	-,+	C2CD2,C21orf121	-425,66532
chr10:124893988-124894199	chr10	+	124893999	124894211	True	NM_022466,NM_001105574	chr10,chr10	-,+	IKZF5,HMX3	-125688,1355
chr16:20728146-20728690	chr16	+	20728213	20728717	True	NM_202000,NM_017736	chr16,chr16	+,-	ACSM3,THUMPD1	46594,24532
chr11:119038050-119039101	chr11	+	119038400	119039096	True	NM_001145018,NM_170722,NM_024618	chr11,chr11,chr11	-,+,+	CCDC153,NLRX1,NLRX1	27538,343,343
chr14:93391704-93391912	chr14	+	93391741	93391906	True	NM_005606,NM_001275	chr14,chr14	-,+	LGMN,CHGA	-176694,-2347
chr19:33199780-33200714	chr19	+	33199867	33200403	True	NM_001110822,NM_032139	chr19,chr19	+,-	TDRD12,ANKRD27	10275,-33765
chr14:56046026-56046764	chr14	+	56046027	56046801	True	NM_004986,NR_027123,NM_001079521,NM_001079522,NM_182926	chr14,chr14,chr14,chr14,chr14	+,-,+,+,+	KTN1,C14orf33,KTN1,KTN1,KTN1	123,59,123,123,123
chr19:8676677-8677529	chr19	+	8676695	8677417	True	NM_030957,NM_001004699	chr19,chr19	-,+	ADAMTS10,OR2Z1	-1107,163973
chrX:108706959-108708487	chrX	+	108707083	108708505	True	NM_018698,NM_001522	chrX,chrX	+,-	NXT2,GUCY2F	70504,16830
chr7:134885566-134886042	chr7	+	134885628	134886076	True	NM_014149,NM_182489	chr7,chr7	-,+	WDR91,STRA8	10290,30654
chr1:53305992-53307092	chr1	+	53306510	53306959	True	NM_001198961,NM_001004339	chr1,chr1	-,+	ECHDC2,ZYG11A	80537,1223
chr13:21519290-21519718	chr13	+	21519305	21519725	True	NM_022459,NM_005870	chr13,chr13	-,+	XPO4,SAP18	-42392,194927
chr19:36359743-36360355	chr19	+	36359746	36360160	True	NM_001024807,NM_004646,NM_005166	chr19,chr19,chr19	+,-,+	APLP1,NPHS1,APLP1	-396,-16851,-396
chr3:101653944-101655758	chr3	+	101653946	101655759	True	NR_026934,NM_000986	chr3,chr3	+,-	LOC152225,RPL24	3943,-248383
chr7:21981312-21981711	chr7	+	21981326	21981758	True	NM_003777,NM_001127371,NM_001127370,NM_018719	chr7,chr7,chr7,chr7	+,-,-,-	DNAH11,CDCA7L,CDCA7L,CDCA7L	-398551,3834,3834,3834
chr3:192637350-192639049	chr3	+	192637565	192638838	True	NM_020386,NM_178496	chr3,chr3	+,-	HRASLS,MB21D2	320079,-1615
chrX:99664303-99664560	chrX	+	99664340	99664528	True	NM_001105243,NM_001184880,NM_022144,NM_020766	chrX,chrX,chrX,chrX	-,-,+,-	PCDH19,PCDH19,TNMD,PCDH19	793,793,175261,793
chr3:129264179-129265609	chr3	+	129264178	129265566	True	NM_153833,NM_015103	chr3,chr3	+,-	H1FOO,PLXND1	-2182,60066
chr4:119750821-119752371	chr4	+	119751024	119752171	True	NM_001128933,NM_014822	chr4,chr4	+,-	SYNPO2,SEC24D	57824,5207
chr9:134357884-134359528	chr9	+	134358007	134359513	True	NR_003050,NR_002914,NM_001135954	chr9,chr9,chr9	+,+,-	SNORD62B,SNORD62A,UCK1	1538,1538,47199
chr4:42903235-42905109	chr4	+	42903270	42905027	True	NM_001080476,NM_006095	chr4,chr4	+,-	GRXCR1,ATP8A1	-8050,-244148
chr22:18633641-18634543	chr22	+	18633887	18634536	True	NM_001136004,NM_017414	chr22,chr22	-,+	MICAL3,USP18	-126562,-1187
chr18:5155348-5156153	chr18	+	5155350	5156177	True	NM_001145194,NR_015389	chr18,chr18	-,+	LOC642597,LOC339290	41129,81921
chr12:3001106-3001768	chr12	+	3001176	3001680	True	NM_202003,NM_001160408,NM_003324	chr12,chr12,chr12	-,+,+	FOXM1,TULP3,TULP3	-14873,-1194,-1194
chr15:80216460-80216765	chr15	+	80216515	80216637	True	NR_028330,NR_037653,NR_037652,NM_001100880,NM_001100879,NM_001199757,NM_001199760	chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,-,-,-,-,-,-	C15orf37,ST20,ST20,ST20,ST20,ST20,ST20-MTHFS	-1455,-419,-419,-851,-8917,-851,-1067
chr1:20508169-20509354	chr1	+	20508220	20509261	True	NM_001105572,NM_152376	chr1,chr1	-,+	PLA2G2C,UBXN10	-6533,3316
chr21:33754403-33754815	chr21	+	33754522	33754844	True	NR_002996,NR_026845	chr21,chr21	-,+	SNORA80,C21orf119	-4891,10597
chr19:45249900-45250287	chr19	+	45249921	45250265	True	NM_005178,NR_027754	chr19,chr19	+,-	BCL3,CEACAM22P	1712,-189771
chr1:228196125-228196395	chr1	+	228196245	228196443	True	NM_033131,NM_003395	chr1,chr1	+,-	WNT3A,WNT9A	-1573,-60569
chr4:84461933-84462293	chr4	+	84462176	84462343	True	NM_032717,NM_139076	chr4,chr4	+,-	AGPAT9,FAM175A	-4575,-55886
chr18:33710670-33710878	chr18	+	33710669	33710832	True	NM_012319,NM_018255,NM_001099406	chr18,chr18,chr18	-,+,-	SLC39A6,ELP2,SLC39A6	-1312,-839,-1312
chr11:31397241-31397824	chr11	+	31397240	31397470	True	NM_181706,NM_181807	chr11,chr11	+,-	DNAJC24,DCDC1	-5914,-5883
chr11:125366222-125366504	chr11	+	125366288	125366552	True	NM_005103,NM_001007277,NM_022549	chr11,chr11,chr11	-,+,-	FEZ1,EI24,FEZ1	-82,72745,-82
chr22:35798695-35799444	chr22	+	35798856	35799316	True	NM_005368,NM_006739	chr22,chr22	-,+	MB,MCM5	214118,-2791
chr7:100302717-100303019	chr7	+	100302800	100302988	True	NM_005837,NM_022574	chr7,chr7	+,-	POP7,GIGYF1	687,-15930
chr6:42990528-42990855	chr6	+	42990749	42990856	True	NM_057161,NM_033112,NM_014623	chr6,chr6,chr6	+,+,-	KLHDC3,RRP36,MEA1	-8823,-1415,-9131
chr14:65450069-65451348	chr14	+	65450195	65451383	True	NM_002028,NM_198686	chr14,chr14	+,-	FNTB,RAB15	2123,-11320
chr10:133795476-133795691	chr10	+	133795650	133795734	True	NM_004052,NR_033191	chr10,chr10	-,+	BNIP3,PPP2R2D	-215,-47741
chr14:32420683-32421003	chr14	+	32420714	32421052	True	NR_027263,NM_001030055	chr14,chr14	-,+	C14orf128,ARHGAP5	124903,125442
chr1:145506618-145506924	chr1	+	145506742	145506808	True	NR_002328,NM_005105,NM_003846,NM_001184795	chr1,chr1,chr1,chr1	-,+,+,+	GNRHR2,RBM8A,PEX11B,PEX11B	9324,748,9356,9751
chr2:71064716-71065796	chr2	+	71064889	71065676	True	NM_015717,NM_012476	chr2,chr2	-,+	CD207,VAX2	-1936,62043
chr11:116692437-116693210	chr11	+	116692648	116693239	True	NM_000482,NM_000040	chr11,chr11	-,+	APOA4,APOC3	823,7384
chr5:746115-746501	chr5	+	746176	746344	True	NM_018140,NM_007030	chr5,chr5	+,-	CEP72,TPPP	-133824,-52666
chr5:746115-746501	chr5	+	838359	838527	False	NM_001166260,NM_024786	chr5,chr5	+,-	TRIP13,ZDHHC11	54441,12624
chr4:74846708-74847160	chr4	+	74846872	74847146	True	NM_001511,NM_002619,NM_002704	chr4,chr4,chr4	+,-,-	CXCL1,PF4,PPBP	-111820,619,6811
chr4:52890916-52892547	chr4	+	52891088	52892338	True	NM_145263,NM_001024611	chr4,chr4	+,-	SPATA18,LRRC66	25254,-7302
chr2:152633750-152634673	chr2	+	152633986	152634689	True	NM_004543,NM_001177665	chr2,chr2	-,+	NEB,RIF1	-42985,-367434
chr20:44095827-44096676	chr20	+	44096002	44096622	True	NM_006103,NM_006652	chr20,chr20	+,-	WFDC2,SPINT3	1771,47692
chr15:90541914-90542582	chr15	+	90542063	90542497	True	NM_182616,NM_198526	chr15,chr15	-,+	C15orf38,ZNF710	-85841,2254
chr19:44078676-44079014	chr19	+	44078689	44079011	True	NM_001193621,NM_001193622,NM_006297	chr19,chr19,chr19	+,+,-	LOC390940,LOC390940,XRCC1	1940,5684,769
chr1:226115135-226116664	chr1	+	226115393	226116465	True	NM_000120,NM_013328	chr1,chr1	+,-	EPHX1,PYCR2	-102442,-3428
chr17:47577246-47577852	chr17	+	47577252	47577844	True	NM_002634,NM_002507	chr17,chr17	-,+	PHB,NGFR	-85010,-4655
chr5:76536271-76536979	chr5	+	76536295	76537023	True	NM_003719,NM_032367	chr5,chr5	+,-	PDE8B,ZBED3	-29640,-153265
chr13:77500347-77501408	chr13	+	77500457	77501131	True	NR_026983,NM_138444	chr13,chr13	+,-	BTF3P11,KCTD12	1453,-39917
chr3:57534769-57536330	chr3	+	57535643	57536159	True	NM_198564,NM_178504,NM_177966	chr3,chr3,chr3	-,-,+	DNAH12,DNAH12,PDE12	-5572,-5572,5821
chr19:39757016-39758022	chr19	+	39757043	39757597	True	NM_172139,NM_172138	chr19,chr19	-,+	IL28B,IL28A	-21432,1559
chr19:39757016-39758022	chr19	-	39736944	39737186	False	NM_172139,NM_172138	chr19,chr19	-,+	IL28B,IL28A	-1333,21970
chr18:57637049-57637650	chr7	+	26224404	26224458	True	NM_002137,NM_007276	chr7,chr7	-,+	HNRNPA2B1,CBX3	16009,16372
chr2:167152172-167153427	chr2	+	167152242	167153201	True	NM_001079810,NM_002977	chr2,chr2	+,-	XIRP2,SCN9A	591795,79353
chr12:8851241-8852077	chr12	+	8851343	8851858	True	NM_003480,NM_020734	chr12,chr12	-,+	MFAP5,RIMKLB	-35910,-876
chr1:228268781-228269445	chr1	+	228268963	228269219	True	NM_001024227,NM_001024226,NM_024319,NM_001658,NM_001024228	chr1,chr1,chr1,chr1,chr1	+,+,-,+,+	ARF1,ARF1,C1orf35,ARF1,ARF1	1631,1141,21853,1141,1631
chr11:102998686-102999390	chr11	+	102998747	102999437	True	NM_001377,NM_032299	chr11,chr11	+,-	DYNC2H1,DCUN1D5	-18638,-35803
chr2:29094062-29095731	chr2	+	29094363	29095752	True	NM_017910,NM_015131	chr2,chr2	-,+	TRMT61B,WDR43	-1188,21780
chr17:48505695-48507020	chr17	+	48506199	48506809	True	NM_025149,NM_018509	chr17,chr17	+,-	ACSF2,LRRC59	-2731,-31285
chr17:6348468-6349286	chr17	+	6348697	6349324	True	NM_019013,NM_014336,NM_001195228	chr17,chr17,chr17	+,-,+	FAM64A,AIPL1,FAM64A	-1013,-10178,-1013
chr19:1437085-1437502	chr19	+	1437275	1437371	True	NM_138924,NM_001018	chr19,chr19	-,+	GAMT,RPS15	-35723,991
chr15:41188274-41188863	chr15	+	41188275	41188459	True	NM_020857,NM_133639	chr15,chr15	+,-	VPS18,RHOV	-1698,-21788
chr1:151586255-151586890	chr1	+	151586297	151586717	True	NM_030918,NM_001172648	chr1,chr1	+,-	SNX27,CELF3	-1686,102125
chr17:36863245-36863877	chr17	+	36863246	36863821	True	NM_001130677,NM_005937	chr17,chr17	-,+	C17orf96,MLLT6	-32059,-1424
chr2:166435369-166436529	chr2	+	166435395	166436434	True	NM_004482,NM_024969	chr2,chr2	-,+	GALNT3,CSRNP3	214430,-6607
chr6:17704445-17705081	chr6	+	17704688	17704906	True	NM_005124,NM_016255	chr6,chr6	-,+	NUP153,FAM8A1	1968,-104221
chrX:153532526-153533485	chrX	+	153532554	153533531	True	NM_001205201,NM_001145934,NM_001145933,NM_012253,NM_001586	chrX,chrX,chrX,chrX,chrX	-,+,+,+,-	TEX28,TKTL1,TKTL1,TKTL1,TEX28	-8990,49,-8578,-8578,-9100
chr4:1244452-1244785	chr4	+	1244503	1244775	True	NM_001012614,NR_033339,NM_001328	chr4,chr4,chr4	-,+,-	CTBP1,C4orf42,CTBP1	-1595,-1326,-1595
chr7:128429699-128430076	chr7	+	128429823	128429919	True	NM_001201372,NM_001708,NM_022742	chr7,chr7,chr7	+,-,+	CCDC136,OPN1SW,CCDC136	1544,-13979,2130
chr8:22523373-22524041	chr8	+	22523386	22524056	True	NM_018688,NM_021174	chr8,chr8	-,+	BIN3,KIAA1967	2655,-60899
chr12:54868288-54869103	chr12	+	54868289	54869155	True	NM_005337,NM_144594	chr12,chr12	+,-	NCKAP1L,GTSF1	22339,-903
chr20:2898656-2898955	chr20	+	2898770	2899005	True	NM_022760,NM_080841	chr20,chr20	-,+	FAM113A,PTPRA	-77438,4847
chr8:22228353-22228641	chr8	+	22228383	22228684	True	NM_015359,NM_001128431,NR_029714,NM_001135153,NM_001135154	chr8,chr8,chr8,chr8,chr8	+,+,-,+,+	SLC39A14,SLC39A14,MIR320A,SLC39A14,SLC39A14	-3672,-3672,-125827,-3384,-3672
chr10:22296724-22297683	chr10	+	22296906	22297697	True	NM_012071,NM_022365	chr10,chr10	+,-	COMMD3,DNAJC1	307614,-4256
chrX:46991775-46992510	chrX	+	46992061	46992249	True	NM_001204466,NM_001135998	chrX,chrX	+,-	RBM10,NDUFB11	12367,11896
chr2:189859020-189859300	chr2	+	189859026	189859348	True	NR_036076,NR_037401	chr2,chr2	-,+	MIR3129,MIR3606	138539,1007
chr9:135856373-135856826	chr9	+	135856562	135856801	True	NM_001135031,NM_001162427,NM_004188	chr9,chr9,chr9	+,-,+	GFI1B,TSC1,GFI1B	-2515,-36542,-2515
chr6:49517151-49517629	chr6	+	49517155	49517428	True	NM_000255,NM_001145652	chr6,chr6	-,+	MUT,C6orf141	-86114,684
chr1:13492910-13493553	chr1	+	13493175	13493369	True	NM_001045480,NM_001099850	chr1,chr1	+,-	PRAMEF16,PRAMEF18	1884,-15606
chr1:13492910-13493553	chr1	+	13714008	13714202	False	NM_001099850,NM_001099851	chr1,chr1	-,+	PRAMEF18,PRAMEF17	-15603,1885
chrX:100188362-100188968	chrX	+	100188531	100188985	True	NM_212559,NM_001012990	chrX,chrX	-,+	XKRX,ARL13A	-4633,35711
chr2:220111465-220112650	chr2	+	220111720	220112672	True	NM_006000,NR_026909,NR_003063,NM_001008910,NM_024506	chr2,chr2,chr2,chr2,chr2	-,+,+,+,-	TUBA4A,STK16,TUBA4B,STK16,GLB1L	6016,-1570,5292,-1579,-1589
chr1:155988525-155989242	chr1	+	155988907	155989040	True	NM_014017,NM_003145	chr1,chr1	+,-	LAMTOR2,SSR2	35476,1775
chr2:55276184-55276389	chr2	+	55276231	55276315	True	NM_207521,NM_207520,NM_001135592,NM_153828,NM_020532	chr2,chr2,chr2,chr2,chr2	-,-,+,-,-	RTN4,RTN4,RPS27A,RTN4,RTN4	61,1469,182723,1469,1469
chr1:48389888-48390098	chr1	+	48389893	48390147	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	72465,298209
chr3:10352029-10353538	chr3	+	10352214	10353537	True	NM_001136232,NR_024272,NR_024146,NM_183352,NR_024273	chr3,chr3,chr3,chr3,chr3	-,-,+,-,-	SEC13,SEC13,GHRLOS,SEC13,SEC13	9238,9371,-24835,9368,9371
chr7:27183174-27183486	chr7	+	27183231	27183447	True	NR_002795,NM_019102,NM_024014	chr7,chr7,chr7	+,-,-	HOXA11-AS1,HOXA5,HOXA6	41579,-26,3971
chr19:37329379-37329664	chr19	+	37329438	37329634	True	NM_003419,NM_206894	chr19,chr19	+,-	ZNF345,ZNF790	11632,-154
chr1:27949363-27950301	chr1	+	27949433	27950275	True	NM_001042747,NM_001042729,NM_001143912	chr1,chr1,chr1	-,-,+	FGR,FGR,FAM76A	2526,2881,102214
chr19:33210002-33210485	chr19	+	33210104	33210464	True	NM_001110822,NM_032139	chr19,chr19	+,-	TDRD12,ANKRD27	214,-44002
chr19:35523132-35523609	chr19	+	35523163	35523583	True	NM_182983,NM_001037,NM_199037,NM_002151,NM_175872	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	HPN,SCN1B,SCN1B,HPN,ZNF792	7826,-1622,-1622,7826,-68210
chr1:234747061-234747731	chr1	+	234747116	234747658	True	NR_033927,NM_001077397,NM_182972	chr1,chr1,chr1	+,-,-	NCRNA00184,IRF2BP2,IRF2BP2	17398,-1845,-1845
chr12:101801337-101801575	chr12	+	101801433	101801541	True	NM_152323,NM_001177	chr12,chr12	+,-	SPIC,ARL1	69793,81
chr3:111756613-111757622	chr3	+	111756821	111757665	True	NM_001042575,NR_026734,NM_001190259	chr3,chr3,chr3	+,+,-	TMPRSS7,TMPRSS7,GCET2	799,799,94537
chr7:80086441-80088353	chr7	+	80086703	80088340	True	NM_001102386,NM_001001547	chr7,chr7	-,+	GNAT3,CD36	52952,143163
chr22:29141392-29142088	chr22	+	29141644	29142097	True	NM_007194,NM_145862,NM_001005735,NM_172002	chr22,chr22,chr22,chr22	-,-,-,+	CHEK2,CHEK2,CHEK2,HSCB	-3822,-3822,-3822,-3653
chr20:30073169-30073470	chr20	+	30073182	30073484	True	NR_024358,NM_001037500	chr20,chr20	+,-	NCRNA00028,DEFB124	96,-12366
chr19:12947263-12948697	chr19	+	12947402	12948743	True	NM_001080997,NM_014975,NM_031429	chr19,chr19,chr19	-,+,-	RTBDN,MAST1,RTBDN	-6195,515,-1172
chr22:24402828-24403103	chr22	+	24402931	24403115	True	NR_003082,NM_012295,NM_001201429,NM_001199281	chr22,chr22,chr22,chr22	-,+,+,+	GSTTP2,CABIN1,CABIN1,CABIN1	-1032,4649,4649,4704
chr22:24402828-24403103	chr22	+	24350252	24350330	False	NM_001144931,NR_003081	chr22,chr22	+,-	LOC391322,GSTTP1	22786,-2994
chr7:148891753-148892308	chr7	+	148892031	148892353	True	NM_001001661,NM_003575	chr7,chr7	-,+	ZNF425,ZNF282	-68593,223
chr1:154128562-154129935	chr1	+	154128733	154129640	True	NM_001159484,NM_207308,NM_001127320	chr1,chr1,chr1	-,-,+	NUP210L,NUP210L,UBAP2L	-1141,-1141,63014
chr16:1833853-1834700	chr16	+	1834019	1834335	True	NM_080861,NM_001146006,NM_012225,NM_004970	chr16,chr16,chr16,chr16	-,-,+,-	SPSB3,IGFALS,NUBP2,IGFALS	-1438,9449,-1142,9449
chr12:25344492-25345480	chr12	+	25344797	25345444	True	NM_001001660,NM_001204101,NM_001204102,NM_001082972,NM_001082973,NM_018272	chr12,chr12,chr12,chr12,chr12,chr12	+,-,-,-,-,-	LYRM5,CASC1,CASC1,CASC1,CASC1,CASC1	2705,2707,2707,2707,2707,2707
chr19:14891254-14891713	chr19	+	14891448	14891664	True	NM_152917,NM_152916,NM_152919,NM_152918,NM_032433,NM_013447,NM_152920,NM_152921	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,+,-,-,-	EMR2,EMR2,EMR2,EMR2,ZNF333,EMR2,EMR2,EMR2	-2095,-2095,-2095,-2095,-90629,-2095,-2095,-2095
chr19:14891254-14891713	chr19	-	14489073	14489289	False	NM_078481,NM_001025160,NM_001204057,NM_001784	chr19,chr19,chr19,chr19	+,+,-,+	CD97,CD97,DDX39A,CD97	2923,2923,40667,2923
chr16:24760517-24761343	chr16	+	24760584	24761112	True	NM_001006634,NM_014494	chr16,chr16	-,+	ARHGAP17,TNRC6A	265613,-19586
chr21:34849585-34850162	chr21	+	34849615	34849807	True	NM_032195,NM_006134	chr21,chr21	+,-	SON,TMEM50B	65542,2536
chr22:45607054-45607821	chr22	+	45607137	45607781	True	NM_015264,NM_153645	chr22,chr22	-,+	KIAA0930,NUP50	616,-46645
chr2:220437382-220437625	chr2	+	220437446	220437580	True	NM_002191,NM_015311,NM_001173431,NM_001173408	chr2,chr2,chr2,chr2	+,-,-,-	INHA,OBSL1,OBSL1,OBSL1	-543,-1178,-1178,-1178
chr1:183974285-183975024	chr1	+	183974358	183975068	True	NM_015101,NM_001127394	chr1,chr1	-,+	GLT25D2,TSEN15	31851,45742
chr6:1388334-1388619	chr6	+	1388383	1388587	True	NM_001452,NR_027116	chr6,chr6	+,-	FOXF2,LOC285768	1481,-286816
chr18:43380069-43381294	chr18	+	43380160	43380939	True	NM_213602,NM_020964	chr18,chr18	+,-	SIGLEC15,EPG5	24605,166423
chr9:138557630-138558106	chr9	+	138557856	138558046	True	NM_001001676,NM_182974	chr9,chr9	+,-	LCN9,GLT6D1	-2739,-26470
chr16:89644631-89644887	chr16	+	89644791	89644851	True	NM_153636,NM_001083314,NM_014427	chr16,chr16,chr16	+,-,+	CPNE7,CHMP1A,CPNE7	-2667,79328,-2667
chr20:2901761-2903374	chr20	+	2901895	2902849	True	NM_022760,NM_080841	chr20,chr20	-,+	FAM113A,PTPRA	-80563,1003
chr2:27371688-27372462	chr2	+	27371861	27372423	True	NM_178553,NM_175769	chr2,chr2	-,+	C2orf53,TCF23	-9529,33
chr20:57428197-57428435	chr20	+	57428295	57428375	True	NM_001077490,NM_080425,NR_002785	chr20,chr20,chr20	+,+,-	GNAS,GNAS,GNAS-AS1	-310,-310,-2337
chr15:44171294-44171725	chr15	+	44171419	44171693	True	NM_024908,NR_003571	chr15,chr15	+,-	WDR76,LOC728758	-52365,-1050
chr12:103890586-103891667	chr12	+	103890624	103891456	True	NM_198521,NM_017564,NM_001099336	chr12,chr12,chr12	-,+,-	C12orf42,STAB2,C12orf42	-878,89612,-875
chr1:93429539-93430479	chr1	+	93429578	93430274	True	NM_001006605,NM_001164391	chr1,chr1	-,+	FAM69A,MTF2	-2499,114517
chr19:56110891-56111287	chr19	+	56111130	56111328	True	NM_153219,NM_032836	chr19,chr19	+,-	ZNF524,FIZ1	401,-237
chr9:35116999-35117280	chr9	+	35116998	35117128	True	NM_006377,NM_025182	chr9,chr9	+,-	UNC13B,KIAA1539	44860,-1105
chr1:186428185-186428503	chr20	+	32805275	32810363	False	NM_001672,NM_000687	chr20,chr20	+,-	ASIP,AHCY	37807,85938
chr1:186428185-186428503	chr1	+	186428323	186428427	True	NM_002597,NM_022375	chr1,chr1	-,+	PDC,OCLM	1862,-58670
chr3:155349243-155349911	chr3	+	155349254	155349955	True	NM_001130960,NM_003875	chr3,chr3	-,+	PLCH1,GMPS	44200,238369
chr3:150695745-150696530	chr3	+	150695836	150696567	True	NR_024066,NM_174878,NM_001195794	chr3,chr3,chr3	+,-,-	CLRN1OS,CLRN1,CLRN1	-5422,-5050,-5050
chr8:74221508-74222730	chr8	+	74221620	74222489	True	NM_000971,NM_172037	chr8,chr8	-,+	RPL7,RDH10	-15751,-14414
chr12:58207200-58207476	chr12	+	58207200	58207406	True	NM_001172697,NM_006576	chr12,chr12	+,-	TSFM,AVIL	-30723,2496
chr22:38430037-38431581	chr22	+	38430470	38431374	True	NM_013356,NM_001039583	chr22,chr22	-,+	SLC16A8,PICK1	47846,21887
chr17:34955980-34957672	chr17	+	34956113	34957659	True	NM_024864,NM_001033580,NM_024308	chr17,chr17,chr17	+,-,+	MRM1,MYO19,DHRS11	365,-64808,-7938
chr22:26907760-26908431	chr22	+	26907924	26908440	True	NM_001013694,NM_001008697,NM_012143	chr22,chr22,chr22	+,-,-	SRRD,TFIP11,TFIP11	-28125,47,47
chr7:100767541-100768519	chr7	+	100767645	100768455	True	NM_003378,NM_001165413,NM_000602	chr7,chr7,chr7	-,+,+	VGF,SERPINE1,SERPINE1	40447,1923,1923
chr7:44084353-44084633	chr7	+	44084352	44084610	True	NR_024116,NM_001014436,NM_001122956,NR_015401,NM_014063,NR_024416	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,+,+	RASA4P,DBNL,DBNL,FLJ35390,DBNL,FLJ35390	-4130,-164,-164,-5705,-164,-5336
chrX:115002041-115002595	chrX	+	115002439	115002499	True	NM_020871,NM_001172335	chrX,chrX	-,+	LRCH2,PLS3	-533804,-174671
chrX:115002041-115002595	chrX	+	114990489	114991426	False	NM_020871,NM_001172335	chrX,chrX	-,+	LRCH2,PLS3	-521854,-163608
chrX:115002041-115002595	chrX	+	114978555	114979492	False	NM_020871,NM_001172335	chrX,chrX	-,+	LRCH2,PLS3	-509920,-151674
chrX:115002041-115002595	chrX	+	114981534	114985456	False	NM_020871,NM_001172335	chrX,chrX	-,+	LRCH2,PLS3	-512899,-154655
chrX:115002041-115002595	chrX	+	114984517	114985454	False	NM_020871,NM_001172335	chrX,chrX	-,+	LRCH2,PLS3	-515882,-157636
chrX:115002041-115002595	chrX	+	114987498	114988435	False	NM_020871,NM_001172335	chrX,chrX	-,+	LRCH2,PLS3	-518863,-160617
chrX:115002041-115002595	chrX	+	114975562	114976501	False	NM_020871,NM_001172335	chrX,chrX	-,+	LRCH2,PLS3	-506927,-148681
chrX:115002041-115002595	chrX	+	114960647	114961584	False	NM_020871,NM_001172335	chrX,chrX	-,+	LRCH2,PLS3	-492012,-133766
chrX:115002041-115002595	chrX	+	114963628	114964565	False	NM_020871,NM_001172335	chrX,chrX	-,+	LRCH2,PLS3	-494993,-136747
chrX:115002041-115002595	chrX	+	114972571	114973508	False	NM_020871,NM_001172335	chrX,chrX	-,+	LRCH2,PLS3	-503936,-145690
chrX:115002041-115002595	chrX	+	114966609	114967546	False	NM_020871,NM_001172335	chrX,chrX	-,+	LRCH2,PLS3	-497974,-139728
chrX:115002041-115002595	chrX	+	114969590	114970527	False	NM_020871,NM_001172335	chrX,chrX	-,+	LRCH2,PLS3	-500955,-142709
chrX:115002041-115002595	chrX	+	115004523	115005455	False	NM_020871,NM_001172335	chrX,chrX	-,+	LRCH2,PLS3	-535888,-177633
chrX:115002041-115002595	chrX	+	114996449	115000395	False	NM_020871,NM_001172335	chrX,chrX	-,+	LRCH2,PLS3	-527814,-169570
chrX:115002041-115002595	chrX	+	114999454	115000393	False	NM_020871,NM_001172335	chrX,chrX	-,+	LRCH2,PLS3	-530819,-172573
chr16:32896064-32896326	chr16	+	32896242	32896306	True	NR_003083,NM_016212	chr16,chr16	-,+	SLC6A10P,TP53TG3	207,308673
chr16:32896064-32896326	chr16	-	33779021	33779085	False	NR_033866,NM_001205265	chr16,chr16	-,+	LOC390705,TP53TG3B	-480319,-516952
chr12:104010980-104012892	chr12	+	104010989	104012327	True	NM_017564,NM_001099336	chr12,chr12	+,-	STAB2,C12orf42	-29973,-121240
chr16:70206240-70207295	chr16	+	70206260	70207256	True	NR_033959,NM_173619	chr16,chr16	-,+	LOC729513,CLEC18C	52730,671
chr16:70206240-70207295	chr16	-	74456512	74457110	False	NM_001011880,NM_002811	chr16,chr16	-,+	CLEC18B,PSMD7	-1144,-125890
chr16:70206240-70207295	chr16	+	69983348	69983946	False	NM_001136214,NR_003610,NM_182619	chr16,chr16,chr16	+,-,+	CLEC18A,PDXDC2P,CLEC18A	679,115955,863
chrX:16734078-16734881	chrX	+	16734673	16734849	True	NM_032796,NM_019857,NM_175859,NR_033181,NM_001144002	chrX,chrX,chrX,chrX,chrX	+,-,-,+,-	SYAP1,CTPS2,CTPS2,SYAP1,CTPS2	2857,-3614,-3898,2857,-4333
chr1:2406903-2407267	chr1	+	2406958	2407278	True	NM_014638,NM_018216	chr1,chr1	+,-	PLCH2,PANK4	475,50807
chr16:2206703-2207549	chr16	+	2206773	2207581	True	NR_002736,NM_014353,NM_032271	chr16,chr16,chr16	-,+,+	SNORD60,RAB26,TRAF7	-1667,-8173,-1025
chr9:15529204-15530025	chr9	+	15529512	15530008	True	NM_173550,NM_033222	chr9,chr9	+,-	C9orf93,PSIP1	23088,-18509
chr17:8066447-8067079	chr17	+	8066676	8066928	True	NR_037447,NM_014232	chr17,chr17	+,-	MIR3676,VAMP2	23564,-383
chr8:22842291-22843195	chr8	+	22842482	22843230	True	NM_001160036,NM_144962	chr8,chr8	+,-	RHOBTB2,PEBP4	1699,-57061
chr2:130808309-130809598	chr2	+	130808575	130809569	True	NR_026758,NM_032144	chr2,chr2	-,+	LOC440905,RAB6C	105,-71391
chr2:130808309-130809598	chr2	-	132042946	132042996	False	NR_030728,NM_001077637	chr2,chr2	+,-	LOC440910,LOC150786	-6134,78785
chr21:45078798-45079308	chr21	+	45078812	45079302	True	NM_015056,NM_007031	chr21,chr21	+,-	RRP1B,HSF2BP	129,122
chr16:2480153-2480385	chr16	+	2480218	2480424	True	NM_001761,NM_001089	chr16,chr16	+,-	CCNF,ABCA3	-874,-89471
chr12:111018715-111019020	chr12	+	111018836	111018898	True	NM_139283,NM_001082537	chr12,chr12	-,+	PPTC7,TCTN1	2216,32933
chr8:68872574-68872803	chr8	+	68872600	68872770	True	NM_024870,NM_020361,NM_025170	chr8,chr8,chr8	+,-,+	PREX2,CPA6,PREX2	-8048,-213980,-8048
chrY:2806343-2807882	chrY	+	2806393	2807900	True	NM_003411,NM_001145275,NM_001145276,NM_003140	chrY,chrY,chrY,chrY	+,+,+,-	ZFY,ZFY,ZFY,SRY	-2927,-2927,-3333,-150601
chr10:116443301-116443587	chr10	+	116443361	116443497	True	NM_001003408,NM_020940,NM_001003407	chr10,chr10,chr10	-,+,-	ABLIM1,FAM160B1,ABLIM1	967,138005,967
chr19:11494974-11495625	chr19	+	11494976	11495331	True	NM_000121,NM_175871,NR_033663	chr19,chr19,chr19	-,+,-	EPOR,C19orf39,EPOR	42,-9644,42
chr14:62499370-62500085	chr14	+	62499369	62500085	True	NM_031914,NM_001017970	chr14,chr14	+,-	SYT16,TMEM30B	-36888,-750839
chr3:125605139-125605424	chr3	+	125605235	125605407	True	NM_001015050,NR_024250	chr3,chr3	-,+	ALG1L,LOC100125556	50530,30036
chr3:125605139-125605424	chr3	-	75502359	75502409	False	NR_031714,NR_024241	chr3,chr3	+,-	MIR1324,FAM86DP	177504,-18093
chr6:74171856-74172306	chr6	+	74171894	74172144	True	NM_001123226,NM_012123,NM_133645,NM_138441	chr6,chr6,chr6,chr6	+,+,+,-	MTO1,MTO1,MTO1,MB21D1	-491,-491,-491,-9851
chr17:72984572-72984818	chr17	+	72984652	72984806	True	NM_014603,NM_030630	chr17,chr17	+,-	CDR2L,C17orf28	-976,-15752
chr6:8434382-8434646	chr6	+	8434603	8434679	True	NM_015948,NR_004855,NM_001142541,NM_001142540	chr6,chr6,chr6,chr6	-,+,-,-	SLC35B3,HULC,SLC35B3,SLC35B3	1165,217762,1165,1165
chr7:155328247-155328763	chr7	+	155328247	155328776	True	NM_001103176,NM_001427	chr7,chr7	-,+	CNPY1,EN2	-1708,-77474
chr13:49792546-49793168	chr13	+	49792635	49793163	True	NM_030925,NM_001507	chr13,chr13	-,+	CAB39L,MLNR	182622,1310
chr7:17375302-17375938	chr7	+	17375318	17375962	True	NM_001621,NM_176813	chr7,chr7	+,-	AHR,AGR3	-37094,-453705
chr1:145551896-145552958	chr1	+	145551998	145552488	True	NM_144698,NR_002328	chr1,chr1	+,-	ANKRD35,GNRHR2	-2841,-35922
chr10:94603599-94605415	chr10	+	94604167	94605020	True	NM_004969,NM_001013848,NM_019053	chr10,chr10,chr10	-,+,+	IDE,EXOC6,EXOC6	-270315,-9748,3204
chr22:37606504-37606983	chr22	+	37606544	37606956	True	NM_013385,NM_001051	chr22,chr22	+,-	CYTH4,SSTR3	71538,1447
chr12:109461529-109462356	chr12	+	109461760	109462407	True	NM_032663,NM_018711	chr12,chr12	+,-	USP30,SVOP	27972,-2915
chr20:61901999-61902752	chr20	+	61902004	61902554	True	NM_018209,NM_152864,NM_175609	chr20,chr20,chr20	+,-,+	ARFGAP1,NKAIN4,ARFGAP1	1610,-16112,1610
chr19:45444971-45445447	chr19	+	45445165	45445407	True	NM_001646,NM_145288,NR_037932,NM_000483	chr19,chr19,chr19,chr19	+,-,+,+	APOC4,ZNF296,APOC4-APOC2,APOC2	87,134331,87,3831
chr5:142783475-142783728	chr5	+	142783562	142783622	True	NM_001024094,NM_001204261,NM_001204260,NM_001204263,NM_001204262,NM_001204265,NM_001204264,NM_001018076,NM_021182,NM_001204258,NM_001204259,NM_000176,NM_001020825	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,-,-,-,-,+,-,-,-,-	NR3C1,NR3C1,NR3C1,NR3C1,NR3C1,NR3C1,NR3C1,NR3C1,HMHB1,NR3C1,NR3C1,NR3C1,NR3C1	-308,-308,-308,-308,-308,-308,-308,473,408103,-308,-308,-308,-308
chr3:53877968-53879680	chr3	+	53878720	53879518	True	NM_018397,NM_018725	chr3,chr3	-,+	CHDH,IL17RB	952,1058
chr14:67674745-67676256	chr14	+	67674809	67676105	True	NM_173526,NM_015994	chr14,chr14	+,-	FAM71D,ATP6V1D	-18751,150672
chr3:49590833-49591116	chr3	+	49590869	49591131	True	NM_032316,NM_003458	chr3,chr3	-,+	NICN1,BSN	-124112,790
chrX:67653855-67654663	chrX	+	67653940	67654688	True	NM_002547,NM_001195214	chrX,chrX	-,+	OPHN1,YIPF6	-641,63935
chr5:131109828-131111311	chr5	+	131110169	131110951	True	NM_001008738,NM_000588	chr5,chr5	-,+	FNIP1,IL3	21861,285395
chr1:156210298-156210632	chr1	+	156210546	156210646	True	NM_024897,NM_199173,NM_198406	chr1,chr1,chr1	-,+,-	PAQR6,BGLAP,PAQR6	7247,1304,7196
chr4:184404409-184404890	chr4	+	184404667	184404909	True	NR_033995,NM_001564	chr4,chr4	-,+	LOC389247,ING2	20809,21310
chr2:190526376-190526687	chr2	+	190526442	190526689	True	NM_019048,NM_014585	chr2,chr2	+,-	ASNSD1,SLC40A1	-378,-80905
chr15:55617245-55618556	chr15	+	55617596	55618601	True	NM_004855,NM_183235	chr15,chr15	+,-	PIGB,RAB27A	-6522,-35595
chr1:163311713-163313159	chr1	+	163311854	163313206	True	NM_003617,NM_145697	chr1,chr1	-,+	RGS5,NUF2	-138891,-20187
chr5:180022599-180022973	chr5	+	180022700	180023014	True	NM_052863,NM_015455	chr5,chr5	-,+	SCGB3A1,CNOT6	-4213,-101334
chr12:53444697-53445197	chr12	+	53444899	53445243	True	NM_198316,NM_170754,NM_015319,NR_033854	chr12,chr12,chr12,chr12	+,+,+,-	TENC1,TENC1,TENC1,LOC283335	-4140,-1115,-2217,3029
chr3:62360168-62360462	chr3	+	62360306	62360510	True	NM_018008,NM_020685	chr3,chr3	-,+	FEZF2,C3orf14	-1116,-54961
chr2:107141198-107141846	chr2	+	107141450	107141890	True	NM_001144013,NR_003506	chr2,chr2	-,+	RGPD3,PLGLA	-56649,-138732
chr14:22101026-22102275	chr14	+	22101070	22102014	True	NM_001001912,NM_001005466	chr14,chr14	+,-	OR4E2,OR10G2	31282,1041
chr19:55173990-55174431	chr19	+	55173990	55174223	True	NM_006847,NM_001081438,NM_145057	chr19,chr19,chr19	+,+,-	LILRB4,LILRB4,CDC42EP5	-71,-71,-189568
chr1:87018057-87018381	chr1	+	87018142	87018366	True	NR_024602,NM_020729,NM_012128	chr1,chr1,chr1	+,-,+	CLCA4,ODF2L,CLCA4	-5434,-156117,-5434
chr16:50709035-50710332	chr16	+	50709056	50710132	True	NM_153337,NM_022162,NM_182854,NM_001144972	chr16,chr16,chr16,chr16	-,+,-,-	SNX20,NOD2,SNX20,SNX20	5182,20917,5182,5182
chr17:72243243-72244249	chr17	+	72243514	72244166	True	NR_026914,NM_052869	chr17,chr17	-,+	MGC16275,TTYH2	-34054,338
chr16:57579828-57580721	chr16	+	57580150	57580607	True	NM_033212,NM_153837	chr16,chr16	-,+	CCDC102A,GPR114	-9673,-3600
chr18:19288997-19290279	chr18	+	19289311	19289957	True	NM_138340,NR_031565	chr18,chr18	-,+	ABHD3,MIR320C1	-4545,-25891
chr6:112195520-112195798	chr6	+	112195522	112195822	True	NM_002037,NM_003880	chr6,chr6	-,+	FYN,WISP3	-895,179455
chr10:74113256-74113647	chr10	+	74113348	74113656	True	NM_019058,NM_017626,NM_001002762	chr10,chr10,chr10	+,-,-	DDIT4,DNAJB12,DNAJB12	-79722,1301,1301
chr12:103853205-103854095	chr12	+	103853552	103854140	True	NM_198521,NM_017564	chr12,chr12	-,+	C12orf42,STAB2	35656,126928
chr1:31989218-31989681	chr1	+	31989258	31989728	True	NR_033688,NR_027085	chr1,chr1	-,+	PEF1,LOC284551	120540,-5280
chrX:79277258-79278101	chrX	+	79277268	79278130	True	NM_001109878,NM_001109879,NM_004867,NM_016954	chrX,chrX,chrX,chrX	+,+,-,+	TBX22,TBX22,ITM2A,TBX22	-7064,-7064,-654219,-17
chr2:48796149-48797396	chr2	+	48796174	48797197	True	NM_000233,NM_172311	chr2,chr2	-,+	LHCGR,STON1-GTF2A1L	185742,-66
chr2:47402270-47402560	chr2	+	47402334	47402554	True	NM_001743,NM_002354	chr2,chr2	-,+	CALM2,EPCAM	1236,193732
chr12:48495927-48497795	chr12	+	48496279	48497579	True	NM_014554,NM_001166686	chr12,chr12	-,+	SENP1,PFKM	2124,2076
chr2:201169909-201170817	chr2	+	201170173	201170770	True	NM_001100422,NM_001100423,NM_152387,NM_015535,NM_001100424	chr2,chr2,chr2,chr2,chr2	+,+,-,+,+	SPATS2L,SPATS2L,KCTD18,SPATS2L,SPATS2L	214,585,204072,-62,214
chr1:201483258-201484504	chr1	+	201483318	201484316	True	NM_001193570,NM_001193571,NR_026667,NM_004078	chr1,chr1,chr1,chr1	-,-,+,-	CSRP1,CSRP1,RPS10P7,CSRP1	-6931,-7351,4715,-6931
chr13:113029813-113030770	chr13	+	113029918	113030688	True	NM_006322,NM_145248	chr13,chr13	-,+	TUBGCP3,SPACA7	211843,-38
chr10:106033021-106034644	chr10	+	106033278	106034255	True	NM_001191013,NM_183239,NM_001191015,NM_001191014,NM_025145	chr10,chr10,chr10,chr10,chr10	+,+,+,+,-	GSTO2,GSTO2,GSTO2,GSTO2,WDR96	-4705,-4705,631,631,-41158
chr18:11623067-11624553	chr18	+	11623201	11623278	True	NM_023075,NM_182978	chr18,chr18	-,+	MPPE1,GNAL	285420,65857
chr11:74700183-74700566	chr11	+	74700257	74700557	True	NM_006656,NM_182969	chr11,chr11	+,-	NEU3,XRRA1	-358,-40025
chr19:374417-375520	chr19	+	374477	375362	True	NM_016585,NM_130760,NM_199202	chr19,chr19,chr19	-,+,-	THEG,MADCAM1,THEG	697,121127,697
chr13:33774006-33774590	chr13	+	33774013	33774613	True	NM_004795,NM_052851	chr13,chr13	+,-	KL,STARD13	-183493,5624
chr7:55751908-55752794	chr7	+	55752048	55752674	True	NM_182633,NR_027342,NR_027339,NR_027340	chr7,chr7,chr7,chr7	+,-,-,-	ZNF713,FKBP9L,FKBP9L,FKBP9L	227656,4370,4529,3101
chr10:46224389-46225648	chr10	+	46224544	46225185	True	NM_174890,NM_015262,NM_001169106,NM_001169107	chr10,chr10,chr10,chr10	-,+,+,+	ANUBL1,FAM21C,FAM21C,FAM21C	-56293,-1949,-1949,-1949
chr10:46224389-46225648	chr10	+	51829541	51830182	False	NM_018232,NM_001005751,NM_001143974	chr10,chr10,chr10	+,+,-	FAM21B,FAM21A,ASAH2	7703,-1910,178238
chrX:153607249-153607487	chrX	+	153607249	153607521	True	NM_001110556,NM_000117,NM_001456	chrX,chrX,chrX	-,+,-	FLNA,EMD,FLNA	-4243,75,-4243
chr6:167042136-167042647	chr6	+	167042180	167042636	True	NM_021135,NM_007045	chr6,chr6	-,+	RPS6KA2,FGFR1OP	-1454,370179
chr4:154582382-154582693	chr4	+	154582667	154582734	True	NM_173662,NM_003264	chr4,chr4	-,+	RNF175,TLR2	98704,22706
chr20:62367352-62367590	chr20	+	62367435	62367633	True	NM_020062,NM_003224,NM_017806	chr20,chr20,chr20	+,-,+	SLC2A4RG,ARFRP1,LIME1	3577,-28080,344
chr2:237474720-237475714	chr2	+	237474734	237475348	True	NM_020311,NM_024726	chr2,chr2	+,-	CXCR7,IQCA1	3031,-58642
chr14:74961041-74961320	chr14	+	74961120	74961367	True	NM_194279,NM_006432	chr14,chr14	+,-	ISCA2,NPC2	-721,-1036
chr22:29599789-29601574	chr22	+	29599935	29601593	True	NM_012265,NM_133455	chr22,chr22	-,+	RHBDD3,EMID1	62371,359
chr17:79340305-79340575	chr17	+	79340379	79340486	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	33053,-35905
chr1:202976930-202978089	chr1	+	202976990	202978105	True	NM_138391,NR_036557,NM_001079809	chr1,chr1,chr1	+,-,+	TMEM183A,LOC401980,TMEM183B	-507,-597,-505
chr1:11539646-11539952	chr1	+	11539765	11539931	True	NM_012168,NM_020780	chr1,chr1	-,+	FBXO2,PTCHD2	175007,-521
chr12:70759025-70759414	chr12	+	70759026	70759402	True	NM_002837,NM_014505	chr12,chr12	-,+	PTPRB,KCNMB4	244272,659
chr2:34089045-34090812	chr2	+	34089050	34090546	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-350166,-135766
chr7:3082859-3083357	chr7	+	3082972	3083042	True	NM_032415,NM_152744	chr7,chr7	-,+	CARD11,SDK1	517,258037
chr7:100422718-100422958	chr7	+	100422786	100422942	True	NM_020246,NM_004444	chr7,chr7	+,-	SLC12A9,EPHB4	27415,2251
chr17:48450648-48451639	chr17	+	48450679	48451489	True	NM_152463,NM_016504,NM_001166131	chr17,chr17,chr17	+,-,+	EME1,MRPL27,EME1	-149,-117,-149
chr8:114447030-114447525	chr8	+	114447127	114447445	True	NR_031745,NM_052900,NM_198123	chr8,chr8,chr8	+,-,-	MIR2053,CSMD3,CSMD3	-791456,1847,1847
chr16:88730407-88731277	chr16	+	88730464	88731108	True	NM_002461,NR_024399,NR_024402	chr16,chr16,chr16	-,+,+	MVD,MGC23284,MGC23284	-969,-734,-734
chr5:68668479-68669246	chr5	+	68668830	68669187	True	NM_003187,NM_002873,NM_016283,NM_133338,NM_133339,NM_001015892,NM_001015891,NM_133344,NM_133341,NM_133340,NM_133343,NM_133342	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,+,-,+,+,-,-,+,+,+,+,+	TAF9,RAD17,TAF9,RAD17,RAD17,TAF9,TAF9,RAD17,RAD17,RAD17,RAD17,RAD17	-3421,-2361,-3421,-3254,-1612,-2990,-2990,-3254,-2031,-2031,-3769,-3254
chr11:85338541-85338940	chr11	+	85338592	85338933	True	NR_036465,NM_001193537,NM_001193538,NM_018480,NM_001142699	chr11,chr11,chr11,chr11,chr11	+,+,+,+,-	TMEM126B,TMEM126B,TMEM126B,TMEM126B,DLG2	688,688,688,688,-278
chr1:54619418-54619653	chr1	+	54619429	54619693	True	NM_201546,NM_016491	chr1,chr1	-,+	CDCP2,MRPL37	2,46146
chr2:56412628-56412869	chr2	+	56412697	56412898	True	NM_001080433,NR_030623	chr2,chr2	+,-	CCDC85A,MIR216B	-1490,-184767
chr19:3881165-3881616	chr19	+	3881239	3881557	True	NM_001145640,NM_033064	chr19,chr19	-,+	ZFR2,ATCAY	-12212,-672
chr5:175812776-175814172	chr5	+	175812924	175814031	True	NM_016391,NM_138820	chr5,chr5	-,+	NOP16,HIGD2A	1559,1752
chr19:49519819-49520074	chr19	+	49519834	49519896	True	NM_000894,NM_000737,NM_033378	chr19,chr19,chr19	-,-,+	LHB,CGB,CGB2	501,7747,15233
chr9:134404575-134404779	chr9	+	134404575	134404661	True	NM_001135954,NM_007171,NM_031432	chr9,chr9,chr9	-,+,-	UCK1,POMT1,UCK1	2051,-26337,2051
chr12:131357625-131359458	chr12	+	131357654	131359023	True	NM_194356,NM_006325	chr12,chr12	-,+	STX2,RAN	-33843,-1095
chr2:170624097-170624310	chr2	+	170624117	170624341	True	NM_003142,NM_014168	chr2,chr2	+,-	SSB,METTL5	31047,57062
chrX:55515917-55516179	chrX	+	55515964	55516100	True	NM_014061,NM_201286	chrX,chrX	+,-	MAGEH1,USP51	-37477,-333
chr9:2727002-2727242	chr9	+	2727071	2727251	True	NM_133497,NR_015375	chr9,chr9	+,-	KCNV2,FLJ35024	-9596,-104698
chr3:42845186-42845485	chr3	+	42845194	42845508	True	NM_001296,NM_001099669,NM_001099668,NM_014056	chr3,chr3,chr3,chr3	+,-,-,-	CCBP2,HIGD1A,HIGD1A,HIGD1A	5455,569,476,569
chr1:241712286-241713276	chr1	+	241712870	241713314	True	NM_003679,NM_000143	chr1,chr1	+,-	KMO,FH	-17249,-29785
chr21:43493096-43493394	chr21	+	43493251	43493423	True	NM_173568,NR_027243,NM_001004416	chr21,chr21,chr21	+,-,+	UMODL1,C21orf128,UMODL1	-1876,35271,-1876
chr17:7487477-7488165	chr17	+	7487482	7487974	True	NR_002918,NM_004870,NM_001040059,NR_002912,NR_024603,NM_006942,NM_001251,NR_002604	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,-,+,+	SNORA48,MPDU1,CD68,SNORA67,MPDU1,SOX15,CD68,SNORD10	-9510,-576,-4735,-6268,-576,5564,-4736,-7412
chr11:13985488-13985725	chr11	+	13985498	13985650	True	NM_006108,NM_001177315	chr11,chr11	+,-	SPON1,RRAS2	-1635,394431
chr22:41599943-41600518	chr22	+	41600062	41600493	True	NM_138481,NM_031488	chr22,chr22	-,+	CHADL,L3MBTL2	36499,819
chrX:582634-584578	chrY	+	532721	534493	False	NM_006883,NM_000451,NM_013239	chrY,chrY,chrY	+,+,-	SHOX,SHOX,PPP2R3B	585,585,-235031
chrX:582634-584578	chrX	+	582721	584493	True	NM_006883,NM_000451,NM_013239	chrX,chrX,chrX	+,+,-	SHOX,SHOX,PPP2R3B	585,585,-235031
chr5:149380738-149381187	chr5	+	149380859	149381228	True	NM_014983,NM_030953	chr5,chr5	+,-	HMGXB3,TIGD6	-741,-642
chr1:226957465-226957823	chr1	+	226957520	226957822	True	NM_002221,NM_000447	chr1,chr1	-,+	ITPKB,PSEN2	-30644,100450
chr12:39815349-39816884	chr12	+	39815749	39816902	True	NM_001031748,NM_001173463	chr12,chr12	+,-	C12orf40,KIF21A	203069,20346
chr16:15026482-15026697	chr16	+	15026497	15026737	True	NR_023387,NM_006985	chr16,chr16	-,+	ABCC6P2,NPIP	-107938,4562
chr16:15026482-15026697	chr16	+	16424984	16425162	False	NR_036447,NM_001079528	chr16,chr16	+,-	PKD1P1,ABCC6	-13569,-107656
chr16:15026482-15026697	chr16	-	18471267	18471445	False	NR_036142,NR_003569	chr16,chr16	-,+	MIR3180-2,ABCC6P1	24729,111124
chr14:78882231-78883460	chr14	+	78882332	78883405	True	NM_004796,NM_012245	chr14,chr14	+,-	NRXN3,SNW1	-12296,-654835
chr3:100210102-100211030	chr3	+	100210113	100210919	True	NM_014820,NM_018004	chr3,chr3	-,+	TOMM70A,TMEM45A	-89888,543
chrX:130780799-130781535	chrX	+	130780870	130781570	True	NM_001004486,NR_026975	chrX,chrX	+,-	OR13H1,LOC286467	-102873,183152
chr14:96124560-96126549	chr14	+	96124562	96126578	True	NM_001098725,NR_028288	chr14,chr14	-,+	TCL1A,TCL6	54005,-7098
chr17:26734522-26735469	chr17	+	26734543	26735465	True	NM_080669,NM_015077	chr17,chr17	-,+	SLC46A1,SARM1	-1315,-35607
chr4:25313856-25314487	chr4	+	25313957	25314435	True	NM_024936,NM_016955	chr4,chr4	+,-	ZCCHC4,SEPSECS	-40,-151753
chr17:8299582-8299891	chr17	+	8299598	8299904	True	NM_001146684,NM_001025579	chr17,chr17	-,+	RNF222,NDEL1	1290,39274
chr1:212459974-212461449	chr1	+	212460023	212460857	True	NM_006243,NM_001198862	chr1,chr1	+,-	PPP2R5A,TMEM206	-1195,127436
chr11:1650176-1650681	chr11	+	1650293	1650677	True	NM_001012709,NM_001001480	chr11,chr11	-,+	KRTAP5-4,KRTAP5-5	-6925,355
chr4:26320473-26320768	chr4	+	26320653	26320741	True	NM_203284,NM_015874,NM_203283,NM_005349,NM_000730	chr4,chr4,chr4,chr4,chr4	+,+,+,+,-	RBPJ,RBPJ,RBPJ,RBPJ,CCKAR	1706,1706,590,590,171351
chr1:236306024-236306430	chr1	+	236306048	236306346	True	NM_002508,NM_003272	chr1,chr1	-,+	NID1,GPR137B	-77567,-267
chr6:27110868-27111960	chr6	+	27111176	27111968	True	NM_080596,NM_003495,NR_036096,NM_080593	chr6,chr6,chr6,chr6	+,+,+,-	HIST1H2AH,HIST1H4I,MIR3143,HIST1H2BK	2939,-4147,3436,2720
chr10:4944143-4945293	chr10	+	4944447	4945121	True	NR_026743,NM_001353	chr10,chr10	-,+	tAKR,AKR1C1	13394,60332
chr9:36169733-36170119	chr9	+	36169751	36170149	True	NM_001190383,NM_005893	chr9,chr9	-,+	GNE,CCIN	88397,-413
chr1:218458093-218458535	chr1	+	218458143	218458509	True	NM_016052,NM_018040	chr1,chr1	+,-	RRP15,GPATCH2	119,-653734
chr14:69864027-69864351	chr14	+	69864029	69864316	True	NM_004450,NM_018375	chr14,chr14	-,+	ERH,SLC39A9	755,1090
chr3:33156117-33156663	chr3	+	33156228	33156422	True	NM_001135602,NM_006371	chr3,chr3	-,+	GLB1,CRTAP	-17534,-831
chr10:99159529-99160204	chr10	+	99159786	99160196	True	NM_015179,NM_001145114,NM_002629	chr10,chr10,chr10	-,-,+	RRP12,RRP12,PGAM1	981,981,25830
chr1:182767521-182768496	chr1	+	182767706	182768539	True	NM_033345,NM_001200052,NM_001200050,NM_001200051,NM_001200056,NM_030769	chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,+,+,+	RGS8,NPL,NPL,NPL,NPL,NPL	-125639,-9174,-9174,-9174,-9174,-9174
chr8:10385187-10385442	chr8	+	10385198	10385374	True	NM_001197020,NM_178857,NM_198464	chr8,chr8,chr8	+,-,+	PRSS55,RP1L1,PRSS55	-2193,127293,-2193
chr4:174087325-174088165	chr4	+	174087643	174088204	True	NM_017423,NM_001130689	chr4,chr4	+,-	GALNT7,HMGB2	1699,166779
chrY:19692166-19692658	chrY	+	19692182	19692518	True	NR_028084,NR_002161,NR_002160	chrY,chrY,chrY	+,-,-	FAM41AY2,NCRNA00230A,NCRNA00230B	-79395,-829,-850
chrY:19692166-19692658	chrY	-	20487254	20487590	False	NR_028083,NR_002161,NR_002160	chrY,chrY,chrY	-,+,+	FAM41AY1,NCRNA00230A,NCRNA00230B	79392,828,849
chr1:224372556-224372988	chr1	+	224372714	224373028	True	NM_003676,NR_031574	chr1,chr1	+,-	DEGS1,MIR320B2	-1845,71865
chr10:105723963-105725615	chr10	+	105724194	105725650	True	NM_024928,NM_014720	chr10,chr10	-,+	OBFC1,SLK	-46149,1819
chr21:43771347-43771864	chr21	+	43771377	43771777	True	NM_005423,NM_001001895	chr21,chr21	-,+	TFF2,UBASH3A	-169,52241
chr9:140657695-140657947	chr9	+	140657758	140657996	True	NM_032937,NR_024341	chr9,chr9	-,+	C9orf37,FLJ40292	-144450,-335
chr14:105334834-105335038	chr14	+	105334862	105335060	True	NM_015005,NM_001112726,NM_001014432	chr14,chr14,chr14	+,+,-	KIAA0284,KIAA0284,AKT1	-3263,-3263,-72782
chr1:28195924-28196618	chr1	+	28196082	28196658	True	NM_001039477,NM_004848,NM_002946,NM_001105556	chr1,chr1,chr1,chr1	+,+,-,+	C1orf38,C1orf38,RPA2,C1orf38	2396,2396,44628,2396
chr17:41004281-41006050	chr17	+	41004397	41005983	True	NM_001158,NM_003734,NM_009590,NM_003766	chr17,chr17,chr17,chr17	+,+,+,-	AOC2,AOC3,AOC2,BECN1	-7842,-1250,-7842,-28087
chr22:38052548-38053509	chr22	+	38052573	38053165	True	NM_020315,NM_006498	chr22,chr22	+,-	PDXP,LGALS2	1571,-76549
chr20:44483908-44484111	chr20	+	44483955	44484028	True	NM_005469,NR_037628,NM_080752	chr20,chr20,chr20	-,+,+	ACOT8,ZSWIM3,ZSWIM3	2075,2191,2191
chr6:85473664-85474085	chr6	+	85473764	85474108	True	NM_001204813,NM_001080508	chr6,chr6	+,-	NT5E,TBX18	685193,77
chr3:193967297-193968264	chr3	+	193967330	193968265	True	NR_024480,NM_005524	chr3,chr3	-,+	LOC100131551,HES1	62379,-113450
chr2:231281299-231281509	chr2	+	231281298	231281480	True	NM_001185015,NM_001080391,NM_003113	chr2,chr2,chr2	-,+,+	SP110,SP100,SP100	-190854,-478,-478
chr1:41622201-41622756	chr1	+	41622391	41622460	True	NM_001172221,NR_037868,NM_001031694,NM_001172222	chr1,chr1,chr1,chr1	-,+,-,-	SCMH1,LOC100507178,SCMH1,SCMH1	6284,-142180,4699,3200
chr19:12476506-12477692	chr19	+	12476588	12477386	True	NM_003437,NM_030824	chr19,chr19	+,-	ZNF136,ZNF442	-202767,-113
chr20:16730424-16730708	chr20	+	16730427	16730756	True	NM_001199866,NM_020157	chr20,chr20	-,+	KIF16B,OTOR	-176348,-1475
chr7:53104279-53105822	chr7	+	53104282	53105485	True	NM_182595,NR_004422	chr7,chr7	+,-	POM121L12,HPVC1	-984,1164680
chr19:54055692-54057084	chr19	+	54056022	54056952	True	NM_001079907,NR_002938	chr19,chr19	+,-	ZNF331,LOC284379	1608,49849
chr12:57881975-57882218	chr12	+	57882085	57882205	True	NM_032496,NM_004990,NM_001080157	chr12,chr12,chr12	-,+,-	ARHGAP9,MARS,ARHGAP9	-8452,-400,-8661
chr18:72168605-72169081	chr18	+	72168610	72169052	True	NM_018235,NM_001044369,NM_001168499	chr18,chr18,chr18	+,-,+	CNDP2,FAM69C,CNDP2	-5161,-44107,-1838
chr1:156164049-156164985	chr1	+	156164054	156164895	True	NM_014655,NM_198406	chr1,chr1	+,-	SLC25A44,PAQR6	-375,52960
chrX:24649996-24651046	chrX	+	24650341	24650899	True	NM_001163265,NM_016937	chrX,chrX	-,+	PCYT1B,POLA1	14606,61164
chr20:3151057-3151824	chr20	+	3151465	3151843	True	NM_014731,NM_033453	chr20,chr20	-,+	ProSAPiP1,ITPA	-2258,38212
chr14:71861979-71863754	chr14	+	71862002	71863799	True	NR_001276,NM_033141	chr14,chr14	+,-	SNORD56B,MAP3K9	1254,-586114
chr17:19314845-19315047	chr17	+	19314865	19315003	True	NM_002404,NM_007148	chr17,chr17	-,+	MFAP4,RNF112	-24333,-430
chr19:53603717-53603968	chr19	+	53603910	53603984	True	NM_001191055,NM_033288,NM_001102603,NM_198893	chr19,chr19,chr19,chr19	+,-,-,-	HERV-V2,ZNF160,ZNF160,ZNF160	-55980,2753,2753,2753
chr4:109086523-109087100	chr4	+	109086619	109087117	True	NM_001130714,NM_001130713,NM_001166119,NM_016269,NR_029374,NR_029373	chr4,chr4,chr4,chr4,chr4,chr4	-,-,-,-,+,+	LEF1,LEF1,LEF1,LEF1,LOC641518,LOC641518	3045,3045,886,3045,1563,6158
chr16:68767616-68768104	chr16	+	68767660	68768114	True	NM_004360,NM_018667	chr16,chr16	+,-	CDH1,SMPD3	3080,-285251
chr9:127950985-127951480	chr9	+	127951162	127951428	True	NM_002721,NM_001174152,NM_001123355,NM_001123369	chr9,chr9,chr9,chr9	-,+,-,-	PPP6C,RABEPK,PPP6C,PPP6C	840,11392,840,840
chr6:39895234-39895626	chr6	+	39895271	39895675	True	NM_001075098,NR_033233,NM_005943,NM_015345	chr6,chr6,chr6,chr6	-,-,-,+	MOCS1,MOCS1,MOCS1,DAAM2	6665,6665,-72,-134549
chr6:3004184-3005187	chr6	+	3004935	3005019	True	NR_033884,NM_000904	chr6,chr6	-,+	LOC401233,NQO2	20036,-4919
chr10:63661528-63662093	chr10	+	63661783	63662129	True	NM_032199,NM_145307	chr10,chr10	+,-	ARID5B,RTKN2	-821,366387
chr20:19266248-19266928	chr20	+	19266295	19266950	True	NR_024564,NM_020689	chr20,chr20	-,+	LOC100130264,SLC24A3	-1055,-73063
chr5:612183-612563	chr5	+	612186	612560	True	NM_007030,NM_018140	chr5,chr5	-,+	TPPP,CEP72	81000,-92
chr19:41222352-41222643	chr19	+	41222423	41222597	True	NM_025194,NM_001142555,NM_024876	chr19,chr19,chr19	+,-,-	ITPKC,ADCK4,ADCK4	410,-1412,243
chr3:46619924-46620634	chr3	+	46620315	46620674	True	NM_003212,NM_024512,NM_001174136	chr3,chr3,chr3	+,-,+	TDGF1,LRRC2,TDGF1	-1294,-12304,-4325
chr8:18070504-18071368	chr8	+	18070790	18071300	True	NM_001160176,NM_001160174,NM_001160175,NM_001160172,NM_001160173,NM_001160170,NM_001160171,NM_000662,NM_004315	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	+,+,+,+,+,+,+,+,-	NAT1,NAT1,NAT1,NAT1,NAT1,NAT1,NAT1,NAT1,ASAH1	-3229,7876,-3229,-3229,-3229,-3229,-3229,-3229,-128283
chr1:110304599-110305564	chr1	+	110304717	110305461	True	NM_139053,NM_000851,NM_133181,NM_024526	chr1,chr1,chr1,chr1	-,+,-,-	EPS8L3,GSTM5,EPS8L3,EPS8L3	1241,-49904,1241,1241
chr1:21617274-21617489	chr1	+	21617367	21617465	True	NM_032264,NM_001113349,NM_001397	chr1,chr1,chr1	+,-,-	NBPF3,ECE1,ECE1	149165,-601,-385
chr20:30600352-30601403	chr20	+	30600351	30601195	True	NM_030815,NM_080625	chr20,chr20	-,+	PDRG1,C20orf160	-60468,-2157
chr1:155217737-155218026	chr1	+	155217755	155218047	True	NM_000157,NM_020897,NM_001171812,NM_001171811,NM_001005742,NM_198264,NM_006589,NM_001005741	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,+,-,-,-,-,-,-	GBA,HCN3,GBA,GBA,GBA,FAM189B,FAM189B,GBA	-6686,29326,-6689,-3102,-3102,7277,7277,-3102
chr20:61553516-61554819	chr20	+	61553990	61554864	True	NM_001193370,NM_017896,NM_001193369,NM_080796	chr20,chr20,chr20,chr20	-,+,-,-	DIDO1,C20orf11,DIDO1,DIDO1	3089,14576,3089,3089
chr1:168701159-168702079	chr1	+	168701217	168701978	True	NR_024160,NM_001937	chr1,chr1	+,-	MGC4473,DPT	54200,-2775
chr5:139682848-139683968	chr5	+	139682874	139683959	True	NM_031467,NM_002622	chr5,chr5	+,-	SLC4A9,PFDN1	55827,-185
chr19:44037077-44037311	chr19	+	44037098	44037360	True	NM_014297,NM_174945	chr19,chr19	-,+	ETHE1,ZNF575	-5702,-21
chr3:36967368-36969041	chr3	+	36967406	36969024	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	17574,65816
chr1:180167560-180167985	chr1	+	180167562	180167968	True	NR_037642,NR_026900	chr1,chr1	-,+	LOC100527964,FLJ23867	75898,-469
chr4:119200497-119200823	chr4	+	119200519	119200843	True	NR_003584,NR_034011,NR_002963,NR_034010,NM_003619	chr4,chr4,chr4,chr4,chr4	+,+,+,+,-	SNHG8,SNHG8,SNORA24,SNHG8,PRSS12	-660,-660,-232,-660,73129
chr4:185723515-185724644	chr4	+	185723787	185724683	True	NR_003542,NM_152683	chr4,chr4	-,+	SLED1,CCDC111	-3587,-153071
chr1:230778450-230778762	chr1	+	230778526	230778734	True	NM_001145036,NM_007357,NM_000029	chr1,chr1,chr1	+,+,-	COG2,COG2,AGT	-375,-375,71652
chr2:95825269-95825541	chr2	+	95825273	95825333	True	NM_021088,NM_032788,NM_001017396	chr2,chr2,chr2	+,-,+	ZNF2,ZNF514,ZNF2	5849,-10,5849
chr22:22876176-22877360	chr22	+	22876457	22877008	True	NM_080740,NR_027426	chr22,chr22	-,+	ZNF280A,LOC648691	-1844,24747
chr1:111025848-111026164	chr1	+	111025859	111026097	True	NM_005549,NR_003599	chr1,chr1	-,+	KCNA10,CYMP	35750,-2522
chr1:109658109-109659471	chr1	+	109658456	109659173	True	NM_020775,NM_001122961	chr1,chr1	+,-	KIAA1324,C1orf194	-1922,-1977
chr7:142632131-142633330	chr7	+	142632242	142633300	True	NM_178829,NM_019841	chr7,chr7	+,-	C7orf34,TRPV5	3302,-1422
chr12:4383923-4384125	chr12	+	4383986	4384112	True	NM_001759,NM_020638	chr12,chr12	+,-	CCND2,FGF23	-1135,104832
chr15:79726196-79727336	chr15	+	79726233	79727185	True	NM_015206,NM_002891	chr15,chr15	+,-	KIAA1024,RASGRF1	-1427,-343018
chr3:111391817-111392317	chr3	+	111391905	111392328	True	NM_001185106,NM_024508,NM_153268	chr3,chr3,chr3	+,-,+	PLCXD2,ZBED2,PLCXD2	1194,-77739,1194
chr10:56515932-56516878	chr10	+	56516080	56516789	True	NM_001190478,NM_001142771	chr10,chr10	+,-	MTRNR2L5,PCDH15	841960,44313
chr6:25811884-25812288	chr6	+	25811885	25812282	True	NM_005074,NM_005495	chr6,chr6	-,+	SLC17A1,SLC17A4	20064,-57009
chr11:64693322-64694188	chr11	+	64693341	64694233	True	NM_015104,NM_006244,NM_130769	chr11,chr11,chr11	-,+,-	ATG2A,PPP2R5B,GPHA2	-8619,-1249,9177
chrX:153200656-153200887	chrX	+	153200693	153200873	True	NM_003491,NM_001164741,NM_001666,NM_002910,NM_001146151	chrX,chrX,chrX,chrX,chrX	-,-,-,-,+	NAA10,ARHGAP4,ARHGAP4,RENBP,AVPR2	-225,-8979,-8979,9409,-30215
chr12:4919720-4919940	chr12	+	4919744	4919924	True	NM_006422,NM_002235	chr12,chr12	-,+	AKAP3,KCNA6	-165401,-1453
chr19:44669169-44669857	chr19	+	44669225	44669890	True	NR_033341,NM_001146220,NM_001032373,NM_001032374,NM_015919,NM_001032372	chr19,chr19,chr19,chr19,chr19,chr19	-,+,+,+,+,+	LOC100379224,ZNF226,ZNF226,ZNF226,ZNF226,ZNF226	-51889,-61,-27,-27,-27,41
chr4:25559749-25560669	chr4	+	25560019	25560639	True	NM_015187,NM_001177998	chr4,chr4	-,+	SEL1L3,SLC34A2	304021,96795
chr3:49976985-49977490	chr3	+	49977127	49977431	True	NM_001167582,NM_005777,NM_032355,NM_001142501	chr3,chr3,chr3,chr3	+,+,-,-	RBM6,RBM6,MON1A,MON1A	45,45,-9682,-9682
chr11:65714280-65714652	chr11	+	65714389	65714677	True	NM_031450,NM_152762	chr11,chr11	-,+	C11orf68,TSGA10IP	-27858,-1325
chr12:122708632-122708930	chr12	+	122708786	122708942	True	NM_030765,NR_024600,NM_138929,NM_019887,NR_024601	chr12,chr12,chr12,chr12,chr12	+,-,-,-,-	B3GNT4,DIABLO,DIABLO,DIABLO,DIABLO	-20619,3190,3190,3190,3190
chr5:178423042-178423375	chr5	+	178423043	178423395	True	NM_001136116,NM_000843	chr5,chr5	+,-	ZNF879,GRM6	27380,-919
chr17:619235-620589	chr17	+	619775	620428	True	NM_018289,NM_024792,NM_001128159	chr17,chr17,chr17	-,+,-	VPS53,FAM57A,VPS53	-1679,15418,-1679
chr17:4477598-4478721	chr17	+	4477626	4478454	True	NM_198501,NM_001114974,NM_153338	chr17,chr17,chr17	+,+,-	SMTNL2,SMTNL2,GGT6	8821,9379,-13750
chr17:1010748-1011461	chr17	+	1010851	1011487	True	NM_001092,NM_013337	chr17,chr17	-,+	ABR,TIMM22	887,-110545
chr5:134075687-134076376	chr5	+	134075930	134076225	True	NM_001745,NM_016103	chr5,chr5	+,-	CAMLG,SAR1B	-1812,-107397
chr20:62438294-62438991	chr20	+	62438512	62438647	True	NM_080622,NM_025224	chr20,chr20	+,-	ABHD16B,ZBTB46	53918,-1656
chr19:2234718-2235413	chr19	+	2235087	2235335	True	NR_031596,NM_007165,NM_018049	chr19,chr19,chr19	-,+,-	MIR1227,SF3A2,PLEKHJ1	-939,1480,1043
chr2:24309027-24309691	chr2	+	24309200	24309738	True	NM_147184,NM_001145710,NM_054033,NM_004881,NM_016047	chr2,chr2,chr2,chr2,chr2	-,+,+,-,-	TP53I3,LOC375190,FKBP1B,TP53I3,SF3B14	-1545,36611,-36675,-1472,-9886
chr2:85893106-85893497	chr2	+	85893105	85893299	True	NM_000542,NM_198843,NM_006433	chr2,chr2,chr2	-,-,+	SFTPB,SFTPB,GNLY	2615,2615,28114
chr3:129249917-129250192	chr3	+	129249948	129250192	True	NM_000539,NM_015103	chr3,chr3	+,-	RHO,PLXND1	-2517,75440
chr17:40610856-40611149	chr17	+	40610933	40611049	True	NM_001130021,NM_001130020,NM_005177,NM_012232	chr17,chr17,chr17,chr17	+,+,+,-	ATP6V0A1,ATP6V0A1,ATP6V0A1,PTRF	-122,-122,-122,-35595
chr1:108508571-108508843	chr1	+	108508612	108508818	True	NM_001143987,NM_006113	chr1,chr1	+,-	NBPF6,VAV3	484085,-1067
chr12:21235450-21235822	chr12	+	21235526	21235858	True	NM_021094,NM_006446	chr12,chr12	-,+	SLCO1A2,SLCO1B1	252024,48269
chr19:12848335-12848548	chr19	+	12848354	12848446	True	NM_024038,NM_004317	chr19,chr19	-,+	C19orf43,ASNA1	-2825,-99
chr5:39364551-39364846	chr5	+	39364620	39364840	True	NM_001737,NM_003999	chr5,chr5	-,+	C9,OSMR	5,-518571
chr14:102228753-102229878	chr14	+	102228850	102229398	True	NM_001161725,NM_001161726,NR_031649	chr14,chr14,chr14	+,+,-	PPP2R5C,PPP2R5C,MIR1247	-766,-766,-202091
chr20:31621889-31622622	chr20	+	31621989	31622631	True	NM_080675,NM_174897	chr20,chr20	-,+	SUN5,BPIL3	-29750,-2586
chr12:121352079-121352784	chr12	+	121352187	121352783	True	NM_139015,NM_000545	chr12,chr12	-,+	SPPL3,HNF1A	-10036,63765
chr5:176517055-176518220	chr5	+	176517058	176518217	True	NM_213647,NM_022963,NM_001199298,NM_002011	chr5,chr5,chr5,chr5	+,+,-,+	FGFR4,FGFR4,UIMC1,FGFR4	-3188,-558,-83263,-3188
chr14:75899369-75899624	chr14	+	75899400	75899578	True	NM_130469,NM_001135049,NM_001135048,NM_007176,NM_001135047	chr14,chr14,chr14,chr14,chr14	+,+,+,-,+	JDP2,JDP2,JDP2,C14orf1,JDP2	-4400,-623,-4540,228010,-4951
chr11:118047673-118048210	chr11	+	118047873	118048215	True	NM_004588,NM_019894	chr11,chr11	-,+	SCN2B,TMPRSS4	-536,-100200
chrY:23566677-23567556	chrY	+	23566723	23567335	True	NR_001574,NM_001006121	chrY,chrY	-,+	RBMY2EP,RBMY1B	-3275,105888
chr17:79496275-79496994	chr17	+	79496280	79496656	True	NM_001077182,NM_012418,NR_037688	chr17,chr17,chr17	+,+,-	FSCN2,FSCN2,ACTG1	-914,-914,-16388
chr19:6531826-6532847	chr19	+	6531938	6532831	True	NM_003811,NM_006087	chr19,chr19	+,-	TNFSF9,TUBB4	-979,-29608
chr1:203141777-203142951	chr1	+	203141784	203142952	True	NM_004997,NM_001048230	chr1,chr1	-,+	MYBPH,ADORA1	2040,-45000
chr19:48248208-48248533	chr19	+	48248518	48248582	True	NM_015710,NM_198479	chr19,chr19	+,-	GLTSCR2,TPRX1	210,58329
chr8:145691085-145691452	chr8	+	145691147	145691490	True	NM_145754,NM_138496,NM_032687,NM_001129888	chr8,chr8,chr8,chr8	+,-,-,-	KIFC2,CYHR1,CYHR1,CYHR1	247,-729,-298,-116
chr22:37309726-37311217	chr22	+	37310057	37311064	True	NM_000395,NM_001163857	chr22,chr22	+,-	CSF2RB,C22orf33	-433,92870
chr11:108532149-108533701	chr11	+	108532148	108533397	True	NM_015065,NM_004398	chr11,chr11	-,+	EXPH5,DDX10	-67774,2418
chr1:154942960-154943511	chr1	+	154943216	154943532	True	NM_003029,NM_001826,NR_036212,NR_024163,NM_138300,NM_001130041,NM_001130040,NM_183001,NM_001202859	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,+,-,-,-,-,-	SHC1,CKS1B,MIR4258,CKS1B,PYGO2,SHC1,SHC1,SHC1,SHC1	3477,3585,4636,3585,-8958,3477,7,7,3477
chr5:131564698-131566333	chr5	+	131564703	131566059	True	NM_001017973,NM_001142598,NM_001142599,NM_001017974,NM_001131027,NM_004199	chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,+,-	P4HA2,P4HA2,P4HA2,P4HA2,PDLIM4,P4HA2	-1768,-1147,-1147,-1147,27291,-1768
chr5:172090446-172092355	chr5	+	172090573	172092201	True	NM_001142651,NM_004417	chr5,chr5	+,-	NEURL1B,DUSP1	-22348,106052
chr4:85503326-85503733	chr4	+	85503328	85503602	True	NM_001263,NM_006168	chr4,chr4	+,-	CDS1,NKX6-1	454,-83941
chr17:39472709-39474045	chr17	+	39472933	39473745	True	NM_030975,NM_031964,NM_001146182	chr17,chr17,chr17	+,-,-	KRTAP9-9,KRTAP17-1,KRTAP16-1	-61358,-986,-7428
chr3:107577540-107578445	chr3	+	107577639	107578151	True	NR_015414,NR_015394	chr3,chr3	-,+	LOC151658,LOC285205	18824,23900
chr11:3078795-3079512	chr11	+	3078856	3079521	True	NM_001194997,NM_001014437,NR_036542,NM_139273,NM_001751,NM_002555	chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,-,+	CARS,CARS,CARS,CARS,CARS,SLC22A18	-175,-175,-175,-175,-175,-155398
chr8:21900848-21901696	chr8	+	21901026	21901385	True	NM_001114137,NM_024815,NM_003867	chr8,chr8,chr8	+,-,+	EPB49,NUDT18,FGF17	9695,65598,-649
chr1:109633608-109633819	chr1	+	109633696	109633818	True	NM_020141,NR_003023,NM_005645	chr1,chr1,chr1	+,+,-	TMEM167B,SCARNA2,TAF13	-344,8996,-15072
chr19:55214990-55215509	chr19	+	55215159	55215519	True	NR_003061,NM_145057	chr19,chr19	+,-	LILRP2,CDC42EP5	4081,-230737
chr12:51786988-51787281	chr12	+	51787182	51787318	True	NM_004858,NM_007210	chr12,chr12	+,-	SLC4A8,GALNT6	31275,-1982
chr8:30019422-30019761	chr8	+	30019549	30019614	True	NM_006571,NM_001100916	chr8,chr8	+,-	DCTN6,MBOAT4	-5793,-17349
chr14:105443693-105443978	chr14	+	105443718	105443858	True	NM_174891,NM_138420	chr14,chr14	+,-	C14orf79,AHNAK2	8757,886
chr2:70520633-70520853	chr2	+	70520642	70520898	True	NM_032822,NM_003096,NM_016297	chr2,chr2,chr2	-,-,+	FAM136A,SNRPG,PCYOX1	8372,21,-35462
chr4:1859957-1861671	chr4	+	1859991	1861404	True	NM_012318,NM_001042424	chr4,chr4	-,+	LETM1,WHSC1	-2017,11718
chr2:218807001-218807606	chr2	+	218807212	218807464	True	NR_034176,NM_022648	chr2,chr2	+,-	RUFY4,TNS1	92192,1382
chr13:40182298-40183243	chr13	+	40182369	40183010	True	NM_020751,NM_005780	chr13,chr13	+,-	COG6,LHFP	46753,-5013
chr7:74377637-74378600	chr7	+	74378319	74378596	True	NM_001025202,NM_001145063	chr7,chr7	-,+	STAG3L2,GATSL1	-71588,486
chr7:74377637-74378600	chr7	+	72567909	72568186	False	NR_002206,NR_003664,NR_003580	chr7,chr7,chr7	+,-,+	GTF2IP1,SPDYE8P,LOC100093631	839,-67600,825
chr7:74377637-74378600	chr7	-	74654284	74654561	False	NR_002206,NM_001003795,NR_003580	chr7,chr7,chr7	-,+,-	GTF2IP1,GTF2IRD2B,LOC100093631	-839,-145989,-825
chr7:74377637-74378600	chr7	-	74868471	74868748	False	NM_001145064,NR_003664	chr7,chr7	-,+	GATSL2,SPDYE8P	-1130,67784
chr14:66196000-66197111	chr14	+	66196051	66197091	True	NM_178157,NR_024334	chr14,chr14	+,-	FUT8,LOC645431	-59982,-316716
chr6:130339680-130340027	chr6	+	130339739	130339948	True	NM_001007102,NM_032438,NM_001010876	chr6,chr6,chr6	+,+,-	L3MBTL3,L3MBTL3,C6orf191	-62,-62,-157323
chr2:162271494-162271945	chr2	+	162271527	162271992	True	NM_006593,NM_001935	chr2,chr2	+,-	TBR1,DPP4	627,659119
chr17:11783370-11784570	chr17	+	11783374	11784594	True	NM_004662,NM_144680	chr17,chr17	+,-	DNAH9,ZNF18	1624,116145
chr11:61275489-61275742	chr11	+	61275533	61275789	True	NM_001145077,NM_004200	chr11,chr11	+,-	LRRC10B,SYT7	482,72559
chr5:77654752-77655079	chr5	+	77654767	77655100	True	NM_003664,NM_004866	chr5,chr5	-,+	AP3B1,SCAMP1	-64239,1238
chr11:69517998-69518492	chr11	+	69518038	69518478	True	NM_005117,NM_053056	chr11,chr11	-,+	FGF19,CCND1	678,-62216
chr14:67963605-67964131	chr14	+	67963825	67964111	True	NM_020715,NM_182526	chr14,chr14	+,-	PLEKHH1,TMEM229B	35896,17960
chr19:57751115-57751589	chr19	+	57751490	57751604	True	NM_001012729,NM_001145078,NM_001023563,NM_001015878,NM_001015879,NM_003160	chr19,chr19,chr19,chr19,chr19,chr19	-,+,+,+,+,+	DUXA,ZNF805,ZNF805,AURKC,AURKC,AURKC	-72634,448,448,-9113,-9164,-9164
chr3:195808010-195808336	chr3	+	195808075	195808297	True	NM_003234,NR_034088,NM_001128148	chr3,chr3,chr3	-,+,-	TFRC,LOC401109,TFRC	714,61209,785
chrX:67914501-67916064	chrX	+	67914602	67916090	True	NM_001142504,NM_002547	chrX,chrX	+,-	STARD8,OPHN1	-1171,-261303
chr22:21056277-21056689	chr22	+	21056330	21056708	True	NM_002650,NR_026815	chr22,chr22	-,+	PI4KA,TMEM191A	32297,-979
chr22:21056277-21056689	chr22	+	21821643	21821831	False	NM_015094,NR_003700	chr22,chr22	+,-	HIC2,PI4KAP2	-50001,49999
chr22:21056277-21056689	chr22	+	20377883	20378260	False	NR_003563,NR_026919	chr22,chr22	-,+	PI4KAP1,LOC150197	20485,-184079
chr1:213221896-213223251	chr1	+	213222303	213223072	True	NM_012424,NM_144567,NM_001136138	chr1,chr1,chr1	+,-,+	RPS6KC1,ANGEL2,RPS6KC1	1515,-33135,1515
chr9:19231189-19231891	chr9	+	19231411	19231906	True	NR_038064,NM_017925	chr9,chr9	-,+	PLIN2,DENND4C	-103807,58842
chr6:15088399-15089654	chr6	+	15089031	15089641	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	156885,573698
chr4:1203639-1204089	chr4	+	1203700	1204126	True	NM_001199021,NR_033339,NR_024569	chr4,chr4,chr4	-,+,-	SPON2,C4orf42,LOC100130872	-950,39101,-950
chr9:25017-25226	chr19	+	66711	66761	True	NM_001005240,NR_033266	chr19,chr19	+,-	OR4F17,WASH5P	43917,4255
chr15:66793345-66794713	chr15	+	66793628	66794576	True	NM_006049,NM_000968,NR_003105,NR_002440,NR_002441,NR_002442,NR_002443,NM_017975	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,+,-,-,-,-,+	SNAPC5,RPL4,ZWILCH,SNORD16,SNORD18A,SNORD18B,SNORD18C,ZWILCH	-3482,2666,2854,730,1134,-9,28,2854
chr1:19612804-19613066	chr1	+	19612813	19612903	True	NM_012067,NR_037847,NM_001040125	chr1,chr1,chr1	-,-,+	AKR7A3,LOC100506730,PQLC2	2427,9377,25836
chr14:90204754-90205084	chr14	+	90205074	90205132	True	NR_024620,NM_001085471	chr14,chr14	+,-	PRO1768,FOXN3	-162565,-119580
chr8:48875937-48877495	chr8	+	48876078	48877407	True	NM_001081640,NM_182746,NM_006904,NM_005914	chr8,chr8,chr8,chr8	-,+,-,+	PRKDC,MCM4,PRKDC,MCM4	-3335,-3373,-3335,-3373
chr12:122356122-122356367	chr12	+	122356156	122356416	True	NM_144668,NM_001178003,NM_001171993	chr12,chr12,chr12	+,+,-	WDR66,WDR66,HPD	63,46,-29639
chr3:48484018-48484503	chr3	+	48484155	48484363	True	NM_024661,NM_130384,NM_015933,NM_032166	chr3,chr3,chr3,chr3	-,+,+,+	CCDC51,ATRIP,CCDC72,ATRIP	-2626,3854,-2520,3854
chr14:24710745-24711080	chr14	+	24710829	24711067	True	NM_001199823,NM_006156,NM_001099274,NM_001002001,NM_001002000,NM_001002002,NM_016576,NM_012461	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	-,-,-,+,+,+,+,-	NEDD8-MDP1,NEDD8,TINF2,GMPR2,GMPR2,GMPR2,GMPR2,TINF2	-9253,-9253,863,-9239,-9239,-8784,-8784,863
chrX:31285659-31286301	chrX	+	31285660	31286165	True	NM_203391,NM_004018,NM_004019,NM_004015,NM_004016,NM_004017	chrX,chrX,chrX,chrX,chrX,chrX	+,-,-,-,-,-	GK,DMD,DMD,DMD,DMD,DMD	-614236,-636,-636,-636,-636,-636
chr1:45265079-45265307	chr1	+	45265251	45265311	True	NM_001013632,NM_004073,NM_001136537	chr1,chr1,chr1	-,+,+	TCTEX1D4,PLK3,BTBD19	7696,724,8842
chr4:49330285-49330672	chr4	+	49330314	49330364	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-342100,-421499
chr4:49330285-49330672	chr4	-	49283932	49283982	False	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-295718,-375117
chr3:39196021-39196971	chr3	+	39196053	39197018	True	NM_033027,NM_145755	chr3,chr3	-,+	CSRNP1,TTC21A	-951,-46952
chr12:57389751-57389973	chr12	+	57389768	57389941	True	NM_007264,NM_014830	chr12,chr12	+,-	GPR182,ZBTB39	-1464,10407
chr11:60148863-60150072	chr11	+	60148912	60150085	True	NM_021201,NM_206939,NM_206938,NM_206940,NM_022349	chr11,chr11,chr11,chr11,chr11	+,+,+,+,-	MS4A7,MS4A7,MS4A7,MS4A7,MS4A6A	-3013,-3013,-3013,-3013,-198238
chr18:20713453-20714074	chr18	+	20713741	20714113	True	NR_023359,NM_001100619,NM_032933	chr18,chr18,chr18	+,+,-	CABLES1,CABLES1,C18orf45	414,1613,303862
chr21:34603049-34603398	chr21	+	34603147	34603397	True	NM_207585,NM_207584,NR_024102,NM_000874	chr21,chr21,chr21,chr21	+,+,-,+	IFNAR2,IFNAR2,C21orf54,IFNAR2	-967,-967,-60606,-967
chr5:176922403-176923290	chr5	+	176922517	176923309	True	NM_213636,NM_001174102,NM_203352,NM_005451	chr5,chr5,chr5,chr5	-,+,-,-	PDLIM7,PRR7,PDLIM7,PDLIM7	1343,-47242,1343,1343
chr15:72764466-72766273	chr15	+	72764615	72766159	True	NM_000520,NM_005744	chr15,chr15	-,+	HEXA,ARIH1	-96095,507
chr1:246887385-246887605	chr1	+	246887474	246887652	True	NM_022366,NM_016002	chr1,chr1	-,+	TFB2M,SCCPDH	-157909,-147
chr5:13948887-13949169	chr5	+	13948892	13949216	True	NM_007118,NM_001369	chr5,chr5	+,-	TRIO,DNAH5	194612,-4303
chr3:26665616-26666119	chr3	+	26665701	26665799	True	NM_052953,NM_199347	chr3,chr3	+,-	LRRC3B,NEK10	-1452,745163
chr17:60351753-60352290	chr17	+	60352154	60352238	True	NR_027486,NM_001144933	chr17,chr17	-,+	TBC1D3P2,EFCAB3	828,95340
chr7:107426894-107428089	chr7	+	107426982	107428029	True	NM_000111,NR_024199	chr7,chr7	-,+	SLC26A3,CBLL1	15706,-42761
chr4:8583628-8584386	chr4	+	8583781	8584347	True	NM_003501,NM_080819	chr4,chr4	-,+	ACOX3,GPR78	-141329,-1541
chr11:10828020-10829106	chr11	+	10828258	10829157	True	NR_034137,NM_001418,NR_004403,NM_001042559,NM_001172705	chr11,chr11,chr11,chr11,chr11	+,-,-,-,-	LOC729013,EIF4G2,SNORD97,EIF4G2,EIF4G2	50606,1477,-5103,1477,438
chr3:101497325-101497975	chr3	+	101497538	101497800	True	NM_145037,NM_001134456,NM_000986	chr3,chr3,chr3	+,+,-	FAM55C,FAM55C,RPL24	228,485,-91975
chrX:71358879-71359501	chrX	+	71358968	71359500	True	NM_207422,NM_001024455	chrX,chrX	+,-	FLJ44635,RGAG4	4533,-7217
chr10:101544385-101546343	chr10	+	101544476	101546202	True	NM_000392,NM_078470	chr10,chr10	+,-	ABCC2,COX15	-2064,-52053
chr13:42036894-42038177	chr13	+	42036895	42038069	True	NM_014059,NM_004294	chr13,chr13	+,-	C13orf15,MTRF1	-5404,-199182
chrX:74960325-74961410	chrX	+	74960327	74961199	True	NR_030737,NM_016500	chrX,chrX	-,+	TTC3P1,CXorf26	1765,431571
chr14:93602541-93603037	chr14	+	93602651	93603084	True	NM_015676,NM_014216	chr14,chr14	+,-	C14orf109,ITPK1	48211,-20388
chr17:79882137-79882631	chr17	+	79882180	79882644	True	NM_002359,NM_016538,NR_015454,NM_032711	chr17,chr17,chr17,chr17	-,-,+,-	MAFG,SIRT7,LOC92659,MAFG	2994,-6122,3060,-772
chr2:27715570-27716821	chr2	+	27715619	27716852	True	NM_022823,NM_015662,NM_001486	chr2,chr2,chr2	-,-,+	FNDC4,IFT172,GCKR	1324,-3048,2853
chr10:43760691-43761011	chr10	+	43760700	43761002	True	NM_001184963,NM_145313	chr10,chr10	+,-	FXYD4,RASGEF1A	106089,1415
chr3:17785310-17785772	chr3	+	17785343	17785753	True	NM_014744,NM_001134380,NR_037465	chr3,chr3,chr3	-,-,+	TBC1D5,TBC1D5,MIR3714	-2944,-1103,-810713
chr17:47046801-47048537	chr17	+	47047266	47048180	True	NM_001160423,NM_004123	chr17,chr17	+,-	IGF2BP1,GIP	26593,-1311
chr14:69865494-69865912	chr14	+	69865686	69865926	True	NM_004450,NM_018375	chr14,chr14	-,+	ERH,SLC39A9	-665,-330
chr8:29940485-29941162	chr8	+	29940591	29941179	True	NM_016127,NM_015344	chr8,chr8	-,+	TMEM66,LEPROTL1	58,11742
chr16:4741493-4741759	chr16	+	4741688	4741796	True	NM_001193452,NM_032349,NM_133450	chr16,chr16,chr16	+,+,-	NUDT16L1,NUDT16L1,ANKS3	1897,1897,42417
chrX:100646800-100647957	chrX	+	100646815	100647599	True	NM_000061,NM_021029,NM_001199974,NM_001199972,NM_001199973	chrX,chrX,chrX,chrX,chrX	-,+,+,+,+	BTK,RPL36A,RPL36A-HNRNPH2,RPL36A,RPL36A-HNRNPH2	-5603,-995,-995,-995,-995
chr1:147036646-147038244	chr1	+	147036931	147038245	True	NM_004326,NM_016361	chr1,chr1	+,-	BCL9,ACP6	-23807,104439
chr1:207275732-207277016	chr1	+	207275743	207277062	True	NM_018566,NM_000715	chr1,chr1	-,+	YOD1,C4BPA	-51321,544
chr6:109463986-109464901	chr6	+	109464053	109464784	True	NM_014454,NM_173830	chr6,chr6	-,+	SESN1,CEP57L1	-48345,-13597
chr15:100109028-100110493	chr15	+	100109220	100110393	True	NM_001171894,NM_001130926,NM_001130927,NM_005587,NM_152449	chr15,chr15,chr15,chr15,chr15	+,+,+,+,-	MEF2A,MEF2A,MEF2A,MEF2A,LYSMD4	-3147,-3147,-3147,-3147,163290
chr17:80272987-80273370	chr17	+	80273215	80273305	True	NM_207459,NM_006137	chr17,chr17	+,-	TEX19,CD7	43817,2225
chr17:47444487-47445017	chr17	+	47444789	47445048	True	NM_014897,NR_034161,NM_001145365	chr17,chr17,chr17	-,+,-	ZNF652,FLJ40194,ZNF652	-4954,-119242,-5313
chr2:8822655-8823740	chr2	+	8822702	8823579	True	NM_020738,NM_002166	chr2,chr2	-,+	KIDINS220,ID2	154226,-640
chr14:96152787-96153983	chr14	+	96152896	96153999	True	NM_001098725,NM_004918	chr14,chr14	-,+	TCL1A,TCL1B	26589,-193
chr1:115880439-115880728	chr1	+	115880446	115880758	True	NM_002506,NM_001172411	chr1,chr1	-,+	NGF,VANGL1	149,303815
chr1:166846681-166848243	chr1	+	166846717	166847301	True	NM_017542,NM_053053	chr1,chr1	+,-	POGK,TADA1	-38046,-1063
chr20:60695527-60696339	chr20	+	60695538	60695787	True	NM_144703,NM_002792	chr20,chr20	+,-	LSM14B,PSMA7	1729,22744
chr14:53620099-53621921	chr14	+	53620283	53621577	True	NM_030637,NM_001160148,NM_001160147,NM_145251	chr14,chr14,chr14,chr14	-,-,-,+	DDHD1,DDHD1,DDHD1,STYX	-237,-237,-237,-423451
chr2:160577490-160578738	chr2	+	160577685	160578429	True	NM_001198763,NM_022826	chr2,chr2	-,+	CD302,MARCH7	76387,-8726
chr8:37595569-37596123	chr8	+	37595662	37596158	True	NR_003671,NM_007175,NM_001003790,NM_001003791	chr8,chr8,chr8,chr8	-,+,+,+	LOC728024,ERLIN2,ERLIN2,ERLIN2	9456,-1619,-1517,-1619
chr6:37789926-37790570	chr6	+	37789967	37790603	True	NM_153487,NM_021943	chr6,chr6	-,+	MDGA1,ZFAND3	-124201,-2716
chr11:125494876-125495143	chr11	+	125494893	125495183	True	NM_001114122,NM_001114121,NM_001274,NM_001612	chr11,chr11,chr11,chr11	+,+,+,-	CHEK1,CHEK1,CHEK1,ACRV1	-28,-28,1128,55660
chr5:179498993-179499248	chr5	+	179499073	179499287	True	NM_003900,NM_018434	chr5,chr5	+,-	SQSTM1,RNF130	-251282,20
chr10:71031526-71033061	chr10	+	71031526	71032712	True	NM_001057,NM_033497,NM_033500,NM_033498	chr10,chr10,chr10,chr10	-,+,+,+	TACR2,HK1,HK1,HK1	144024,-1825,-1825,-1825
chr7:32997607-32998737	chr7	+	32997665	32998691	True	NM_007270,NR_003500	chr7,chr7	+,-	FKBP9,RP9P	-711,-14883
chr3:33759431-33759761	chr3	+	33759433	33759805	True	NM_015097,NR_027868	chr3,chr3	-,+	CLASP2,PDCD6IP	93,80260
chr17:18430666-18430984	chr17	+	18430843	18430918	True	NR_026809,NR_003554,NM_001040078	chr17,chr17,chr17	-,-,+	FAM106A,LOC220594,LGALS9C	-683,-6277,-50795
chr22:25389430-25389766	chr22	+	25389490	25389704	True	NM_001001663,NM_001145206	chr22,chr22	-,+	TMEM211,KIAA1671	-54176,34236
chr9:46386975-46387181	chr9	+	46386998	46387208	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2756268,300357
chr9:46386975-46387181	chr9	-	46117107	46117317	False	NM_001145196,NR_024060	chr9,chr9	-,+	FAM75A6,FAM27A	-2486377,-390129
chr19:23407069-23407521	chr19	+	23407155	23407492	True	NR_003662,NM_003430	chr19,chr19	+,-	RPSAP58,ZNF91	538323,170827
chr5:130971262-130971483	chr5	+	130971280	130971522	True	NM_001164389,NM_001164388,NM_016340,NM_001164390,NM_001164386,NM_001164387,NM_020240	chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,-,-,+	RAPGEF6,RAPGEF6,RAPGEF6,RAPGEF6,RAPGEF6,RAPGEF6,CDC42SE2	-351,-351,-351,-351,-351,-351,-371629
chr19:44488141-44488349	chr19	+	44488158	44488392	True	NM_003445,NM_198089,NM_003425	chr19,chr19,chr19	+,+,-	ZNF155,ZNF155,ZNF45	-8,-8,-48747
chr4:104546841-104547842	chr4	+	104546841	104547746	True	NM_001008388,NM_001059	chr4,chr4	+,-	CISD2,TACR3	-756765,93278
chr7:112554428-112555215	chr7	+	112554445	112555023	True	NM_152556,NM_182597	chr7,chr7	-,+	C7orf60,C7orf53	24964,-433433
chr10:118030096-118030473	chr10	+	118030129	118030522	True	NM_145793,NM_005264,NM_198515,NM_001145453	chr10,chr10,chr10,chr10	-,-,+,-	GFRA1,GFRA1,C10orf96,GFRA1	1347,2654,53417,2324
chr19:19280305-19280524	chr19	+	19280392	19280524	True	NM_001145785,NM_003721	chr19,chr19	-,+	MEF2B,RFXANK	624,22483
chr2:10585920-10586399	chr2	+	10586026	10586258	True	NM_002539,NM_134421,NR_028374	chr2,chr2,chr2	-,+,-	ODC1,HPCAL1,SNORA80B	2259,-142260,781
chr3:46731478-46732928	chr3	+	46731665	46732928	True	NM_001190707,NM_147196,NR_033815,NM_147129	chr3,chr3,chr3,chr3	-,+,-,-	ALS2CL,TMIE,ALS2CL,ALS2CL	2269,9894,2317,2317
chr5:156388787-156390221	chr5	+	156389035	156390247	True	NM_138379,NM_001146726,NR_028472	chr5,chr5,chr5	-,-,+	TIMD4,TIMD4,LOC100286948	69,69,-37993
chr17:1466844-1467434	chr17	+	1467011	1467395	True	NM_006224,NR_028514	chr17,chr17	-,+	PITPNA,LOC100306951	-901,-46850
chr20:17949314-17949562	chr20	+	17949386	17949600	True	NR_003045,NM_152227,NM_014426,NM_052865	chr20,chr20,chr20,chr20	-,-,-,+	SNORD17,SNX5,SNX5,C20orf72	-5797,-20,-232,161
chr1:16012514-16013134	chr1	+	16012625	16012901	True	NM_024758,NM_015164	chr1,chr1	-,+	AGMAT,PLEKHM2	-101020,-1861
chr1:16371885-16373015	chr1	+	16372069	16372771	True	NM_182623,NM_014424,NM_001165945,NM_000085	chr1,chr1,chr1,chr1	-,-,+,+	FAM131C,HSPB7,CLCNKB,CLCNKB	27406,-26784,2512,-1873
chr12:104324657-104325523	chr12	+	104324799	104325472	True	NM_003299,NR_037425,NR_027249	chr12,chr12,chr12	+,+,-	HSP90B1,MIR3652,GNN	-663,-649,-810
chr1:150902013-150902502	chr1	+	150902169	150902549	True	NM_001145415,NM_022075,NR_026977,NM_012432	chr1,chr1,chr1,chr1	+,-,+,+	SETDB1,LASS2,SETDB1,SETDB1	-3410,44941,-3400,-3410
chr5:130599977-130600254	chr5	+	130600028	130600148	True	NR_024610,NM_001038702,NM_020240	chr5,chr5,chr5	-,+,+	HINT1,CDC42SE2,CDC42SE2	-98994,-377,-377
chr7:1022197-1022641	chr7	+	1022243	1022607	True	NM_017781,NM_001031617	chr7,chr7	+,-	CYP2W1,COX19	227,-7008
chr5:71614543-71615660	chr5	+	71614734	71615324	True	NM_015084,NM_024754	chr5,chr5	-,+	MRPS27,PTCD2	814,875
chr15:101789877-101791193	chr15	+	101790019	101791063	True	NM_014918,NM_024652	chr15,chr15	-,+	CHSY1,LRRK1	1124,-330617
chr3:125537157-125538528	chr3	+	125537319	125537929	True	NR_024250,NR_031687	chr3,chr3	+,-	LOC100125556,MIR548I1	97514,-27924
chr16:2569594-2569897	chr16	+	2569652	2569896	True	NM_001048212,NM_001198569,NM_015944,NM_001145815,NM_001694	chr16,chr16,chr16,chr16,chr16	-,+,+,+,+	CEMP1,ATP6V0C,AMDHD2,AMDHD2,ATP6V0C	11563,-5976,466,466,-5832
chr22:18781055-18782000	chr22	+	18781306	18781984	True	NM_005675,NR_003267	chr22,chr22	+,-	DGCR6,GGT3P	111751,-1832
chr22:18781055-18782000	chr22	+	21582429	21583107	False	NR_024583,NR_002829	chr22,chr22	+,-	POM121L8P,P2RX6P	53606,-183891
chrX:119073529-119074844	chrX	+	119074517	119074861	True	NM_024528,NM_178813	chrX,chrX	-,+	NKAP,AKAP14	2926,-44640
chr16:1536453-1536672	chr16	+	1536475	1536659	True	NM_001013658,NM_016111	chr16,chr16	-,+	PTX4,TELO2	1859,6692
chr13:25949367-25949801	chr13	+	25949427	25949680	True	NM_004685,NM_016529	chr13,chr13	-,+	MTMR6,ATP8A2	-87723,-3269
chr20:25037506-25037944	chr20	+	25037633	25037993	True	NM_003650,NM_032501	chr20,chr20	+,-	CST7,ACSS1	-107818,1673
chr14:96507267-96508239	chr14	+	96507337	96508205	True	NM_018036,NR_023938	chr14,chr14	-,+	ATG2B,C14orf132	321523,-1728
chr19:33860375-33861309	chr19	+	33860601	33861288	True	NM_001806,NM_004364	chr19,chr19	+,-	CEBPG,CEBPA	3320,-67171
chr16:14012561-14014008	chr16	+	14012669	14013973	True	NM_005236,NM_001134477	chr16,chr16	+,-	ERCC4,PARN	40,710197
chr12:27916317-27917338	chr12	+	27916404	27917275	True	NM_001146221,NM_020782	chr12,chr12	-,+	LOC100287284,KLHDC5	6984,15911
chr4:69428124-69429047	chr4	+	69428208	69429050	True	NM_014058,NM_001077,NM_001076	chr4,chr4,chr4	+,-,-	TMPRSS11E,UGT2B17,UGT2B15	-115102,5245,5240
chr11:67161290-67161663	chr11	+	67161347	67161639	True	NM_198517,NM_002708,NM_001008709,NM_004584,NM_206873	chr11,chr11,chr11,chr11,chr11	+,-,-,+,-	TBC1D10C,PPP1CA,PPP1CA,RAD9A,PPP1CA	9772,7787,7787,-1975,7787
chr10:6020096-6020328	chr10	+	6020212	6020374	True	NM_032807,NR_033494,NM_002189,NM_172200	chr10,chr10,chr10,chr10	+,-,-,-	FBXO18,IL15RA,IL15RA,IL15RA	-83914,-70,-638,-638
chr17:72430059-72430781	chr17	+	72430278	72430778	True	NM_022036,NM_018653,NM_001080466	chr17,chr17,chr17	+,+,-	GPRC5C,GPRC5C,BTBD17	-2666,-497,-72320
chr3:107928686-107929226	chr3	+	107928775	107929063	True	NM_018010,NM_007072	chr3,chr3	-,+	IFT57,HHLA2	12416,92268
chr3:48954870-48955329	chr3	+	48954870	48955143	True	NM_006321,NM_001123040	chr3,chr3	+,-	ARIH2,C3orf71	1137,1725
chr1:2564996-2565263	chr1	+	2565009	2565155	True	NM_033467,NM_152371	chr1,chr1	-,+	MMEL1,C1orf93	-528,-46871
chr8:146278737-146280463	chr8	+	146278750	146280381	True	NR_023392	chr8	-	ZNF252	-50465
chr11:56948995-56949286	chr11	+	56948999	56949185	True	NM_001005210,NM_005161	chr11,chr11	+,-	LRRC55,APLNR	35,55792
chr12:54954726-54955166	chr12	+	54954813	54955151	True	NM_006741,NM_001165975	chr12,chr12	-,+	PPP1R1A,PDE1B	27342,-40
chrX:99979324-99981091	chrX	+	99980027	99980937	True	NM_080737,NM_014467,NM_001129896,NM_001174068	chrX,chrX,chrX,chrX	-,+,-,-	SYTL4,SRPX2,SYTL4,SYTL4	5635,-80923,6248,5635
chr1:27963111-27963540	chr1	+	27963275	27963571	True	NM_001143912,NM_005248	chr1,chr1	+,-	FAM76A,FGR	88918,-1548
chr1:35370742-35372155	chr1	+	35371061	35372047	True	NM_001080418,NM_002060	chr1,chr1	-,+	DLGAP3,GJA4	-77,-112520
chrX:153662663-153663655	chrX	+	153662667	153663697	True	NM_001009934,NM_004699,NM_001493,NM_001183	chrX,chrX,chrX,chrX	-,+,+,+	DNASE1L1,FAM50A,GDI1,ATP6AP1	-22240,8787,1561,-5740
chr1:55506568-55506831	chr1	+	55506576	55506832	True	NM_014762,NM_174936	chr1,chr1	-,+	DHCR24,PCSK9	-153655,-1478
chr16:84224575-84225053	chr16	+	84224608	84224886	True	NM_139174,NM_139353,NM_005679,NM_001145400	chr16,chr16,chr16,chr16	+,-,-,+	ADAD2,TAF1C,TAF1C,ADAD2	6,-3946,-3946,6
chr4:80994780-80996744	chr4	+	80994915	80996730	True	NM_020226,NM_001145794,NM_058172	chr4,chr4,chr4	+,-,-	PRDM8,ANTXR2,ANTXR2	109693,-438,-438
chr3:51532267-51533230	chr3	+	51532620	51533205	True	NM_001171904,NM_014703,NM_015106	chr3,chr3,chr3	-,-,+	VPRBP,VPRBP,RAD54L2	865,865,42390
chr10:94042931-94043777	chr10	+	94043057	94043452	True	NM_017824,NM_014912	chr10,chr10	+,-	MARCH5,CPEB3	7467,7474
chr11:69520540-69520882	chr11	+	69520673	69520837	True	NM_005117,NM_053056	chr11,chr11	-,+	FGF19,CCND1	-1567,-64851
chr17:80184710-80185333	chr17	+	80184709	80185261	True	NM_001042423,NM_001042422,NM_004207,NM_198082	chr17,chr17,chr17,chr17	+,+,+,-	SLC16A3,SLC16A3,SLC16A3,CCDC57	4882,1031,1627,-14020
chr11:61560566-61560855	chr11	+	61560569	61560887	True	NR_030342,NM_014206,NM_004111	chr11,chr11,chr11	-,-,+	MIR611,C11orf10,FEN1	-536,-484,-470
chr4:41264430-41266136	chr4	+	41264537	41266085	True	NM_173075,NM_004181	chr4,chr4	-,+	APBB2,UCHL1	-47902,-5702
chr15:83477181-83478312	chr15	+	83477279	83478285	True	NM_001007122,NM_001080435	chr15,chr15	-,+	FSD2,WHAMM	-2473,16
chr6:112193290-112193512	chr6	+	112193328	112193528	True	NM_002037,NM_003880	chr6,chr6	-,+	FYN,WISP3	1149,181749
chrX:72061396-72062639	chrX	+	72061416	72062530	True	NM_001080851,NM_033053	chrX,chrX	+,+	DMRTC1B,DMRTC1	2345,2345
chrX:72061396-72062639	chrX	-	72098053	72099077	False	NM_001080851,NM_033053	chrX,chrX	-,-	DMRTC1B,DMRTC1	-2431,-2431
chr22:30644078-30644704	chr22	+	30644147	30644747	True	NM_001017437,NM_002309	chr22,chr22	+,-	CCDC157,LIF	107879,-1351
chr1:9355464-9356153	chr1	+	9355819	9356201	True	NM_025106,NR_029610	chr1,chr1	+,-	SPSB1,MIR34A	-2929,-143983
chr8:142012211-142014039	chr8	+	142012239	142014042	True	NM_153831,NM_005607,NM_014957,NM_001199649	chr8,chr8,chr8,chr8	-,-,+,-	PTK2,PTK2,DENND3,PTK2	-827,-827,124677,-827
chr5:137674292-137675416	chr5	+	137674588	137675395	True	NM_001135647,NM_001790,NM_022809,NM_016605	chr5,chr5,chr5,chr5	+,-,-,+	FAM53C,CDC25C,CDC25C,FAM53C	-1415,-7072,-7072,-935
chr19:45349962-45350225	chr19	+	45350007	45350197	True	NM_001042724,NM_145288,NM_002856	chr19,chr19,chr19	+,-,+	PVRL2,ZNF296,PVRL2	-665,229541,-665
chr1:54870654-54870986	chr1	+	54870666	54871004	True	NM_018070,NM_145716,NM_147161,NM_001009955	chr1,chr1,chr1,chr1	-,-,+,-	SSBP3,SSBP3,ACOT11,SSBP3	1025,1025,142802,1138
chr22:38507449-38507815	chr22	+	38507480	38507692	True	NM_012407,NM_025045	chr22,chr22	+,-	PICK1,BAIAP2L2	-54279,-804
chr12:27102602-27103246	chr12	+	27102806	27103149	True	NM_018164,NM_015633	chr12,chr12	-,+	C12orf11,FGFR1OP2	-11552,-11554
chr4:110623295-110623767	chr4	+	110623340	110623486	True	NM_018983,NM_001226,NM_032992	chr4,chr4,chr4	+,-,-	GAR1,CASP6,CASP6	113179,1195,1195
chr20:2843375-2843922	chr20	+	2843467	2843959	True	NM_002836,NM_022760	chr20,chr20	+,-	PTPRA,FAM113A	881,-22135
chr20:35502518-35502938	chr20	+	35502811	35502879	True	NM_080628,NM_080627	chr20,chr20	+,-	C20orf118,KIAA0889	1690,-10724
chr7:1501459-1502060	chr7	+	1501576	1501922	True	NM_002360,NM_182924	chr7,chr7	+,-	MAFK,MICALL2	68445,-2467
chr20:44511476-44512470	chr20	+	44511495	44512357	True	NM_080749,NM_080608,NM_001167594,NM_080603,NM_000308,NM_001127695	chr20,chr20,chr20,chr20,chr20,chr20	-,-,+,+,+,+	NEURL2,C20orf165,CTSA,ZSWIM1,CTSA,CTSA	7594,3931,7233,-1698,7233,7233
chr4:122074360-122076158	chr4	+	122074442	122075737	True	NM_024873,NR_024365	chr4,chr4	-,+	TNIP3,LOC100192379	9796,610002
chr19:463561-463856	chr19	+	463625	463867	True	NM_012435,NM_130760	chr19,chr19	-,+	SHC2,MADCAM1	-2629,32622
chr5:178450409-178450744	chr5	+	178450447	178450739	True	NM_001136116,NM_000843	chr5,chr5	+,-	ZNF879,GRM6	36,-28323
chr16:15592181-15593177	chr16	+	15592582	15593016	True	NM_001184998,NM_001142469	chr16,chr16	-,+	KIAA0430,C16orf45	144057,3106
chr1:229406326-229406592	chr1	+	229406333	229406561	True	NM_145257,NM_004578	chr1,chr1	-,+	C1orf96,RAB4A	72177,317
chr2:26218789-26220708	chr2	+	26219182	26220685	True	NM_002254,NM_016131	chr2,chr2	-,+	KIF3C,RAB10	-13739,36043
chr7:99275118-99275796	chr7	+	99275117	99275723	True	NR_033810,NR_033808,NR_033809,NR_033812,NR_033811,NR_033807,NM_145115,NM_000777,NM_001190484	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,-,+,-,-	CYP3A5,CYP3A5,CYP3A5,CYP3A5,CYP3A5,CYP3A5,ZNF498,CYP3A5,CYP3A5	1948,1948,1948,1948,1948,1948,-60598,1948,1948
chr7:128581880-128582337	chr7	+	128581959	128582335	True	NM_199349,NM_001098629,NM_032643,NM_001098627,NM_001098630	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	KCP,IRF5,IRF5,IRF5,IRF5	-31186,-4024,-3747,-1246,-4024
chrX:101818807-101819341	chrX	+	101818852	101819360	True	NR_002216,NM_021992	chrX,chrX	+,-	NXF4,TMSB15A	-14010,-47153
chr3:9811505-9811712	chr3	+	9811541	9811747	True	NM_003656,NM_016829	chr3,chr3	-,+	CAMK1,OGG1	29,-19964
chr14:57274685-57275006	chr14	+	57274770	57275040	True	NM_021728,NM_172337,NR_029385	chr14,chr14,chr14	-,-,+	OTX2,OTX2,OTX2OS1	2194,-2425,4860
chr14:52538874-52540666	chr14	+	52538936	52540687	True	NM_007361,NM_016039	chr14,chr14	-,+	NID2,C14orf166	-2990,-82759
chr20:23129779-23130531	chr20	+	23129816	23130540	True	NR_034149,NM_001052	chr20,chr20	-,+	LOC200261,SSTR4	-16543,-113810
chr15:52953116-52954687	chr15	+	52953541	52954522	True	NM_002748,NM_019600	chr15,chr15	+,-	MAPK6,KIAA1370	-642181,16349
chr11:35634139-35634794	chr11	+	35634144	35634580	True	NM_015430,NM_014344	chr11,chr11	-,+	PAMR1,FJX1	-86968,5154
chr16:80841380-80841935	chr16	+	80841557	80841921	True	NM_152342,NM_018455	chr16,chr16	-,+	CDYL2,CENPN	-3382,198181
chr10:88430733-88431142	chr10	+	88430830	88430982	True	NM_001080115,NM_001080114,NM_001080116,NM_001171611,NM_001171610,NM_007078,NM_015045	chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,+,-	LDB3,LDB3,LDB3,LDB3,LDB3,LDB3,WAPAL	-2455,-2455,-2560,-2455,-2675,-2455,-149289
chr3:48471520-48472276	chr3	+	48471557	48472225	True	NM_024661,NM_001130082,NM_015933,NM_002673	chr3,chr3,chr3,chr3	-,-,+,-	CCDC51,PLXNB1,CCDC72,PLXNB1	9354,-97,9460,-685
chr1:111742489-111743057	chr1	+	111742523	111743055	True	NM_024901,NM_001025197	chr1,chr1	-,+	DENND2D,CHI3L2	276,27225
chr1:109794407-109794872	chr1	+	109794499	109794867	True	NM_001408,NM_001005290	chr1,chr1	+,-	CELSR2,PSRC1	-1909,30973
chr8:23078440-23079480	chr8	+	23078500	23079394	True	NR_033928,NM_003844	chr8,chr8	+,-	LOC389641,TNFRSF10A	3339,3336
chr14:95029716-95030029	chr14	+	95029798	95030030	True	NM_006215,NM_173850	chr14,chr14	+,-	SERPINA4,SERPINA12	-2066,-45617
chr20:42967116-42967431	chr20	+	42967145	42967425	True	NM_178491,NM_001080472	chr20,chr20	+,-	R3HDML,FITM2	-1580,-27256
chr11:75478671-75479186	chr11	+	75478684	75479220	True	NM_032564,NM_207577	chr11,chr11	+,-	DGAT2,MAP6	557,-99205
chr12:57472494-57473328	chr12	+	57472567	57473329	True	NM_001130963,NM_005967,NM_015257	chr12,chr12,chr12	-,+,-	TMEM194A,NAB2,TMEM194A	7,9347,7
chr1:9087561-9088495	chr1	+	9087592	9088361	True	NM_001215,NM_207420	chr1,chr1	+,-	CA6,SLC2A7	-81729,-1188
chr9:104249368-104249801	chr9	+	104249597	104249780	True	NM_019592,NM_032342	chr9,chr9	+,-	RNF20,C9orf125	46352,-122
chr3:141593931-141594523	chr3	+	141593949	141594533	True	NM_001679,NM_001178140	chr3,chr3	+,-	ATP1B3,TFDP2	936,124746
chr10:71076475-71077612	chr10	+	71076486	71077490	True	NM_033496,NM_001057,NM_000188	chr10,chr10,chr10	+,-,+	HK1,TACR2,HK1	-927,99234,1112
chr1:169595450-169596091	chr1	+	169595498	169595935	True	NM_003005,NM_018186	chr1,chr1	-,+	SELP,C1orf112	3505,168614
chr14:55738663-55738886	chr14	+	55738714	55738866	True	NM_152231,NM_014750,NM_017943	chr14,chr14,chr14	+,-,+	FBXO34,DLGAP5,FBXO34	5,-80318,-744
chr8:81212767-81213463	chr8	+	81212844	81213406	True	NM_005079,NM_001105539	chr8,chr8	-,+	TPD52,ZBTB10	-129008,185041
chr3:14693600-14694128	chr3	+	14693606	14694061	True	NM_016474,NM_001080423	chr3,chr3	+,-	C3orf19,GRIP2	-404,-110018
chr2:128436211-128436618	chr2	+	128436272	128436514	True	NM_001161404,NM_001136037,NM_001161403,NM_032740	chr2,chr2,chr2,chr2	-,-,-,+	LIMS2,LIMS2,LIMS2,SFT2D3	2896,-3508,-3508,22082
chr15:35086944-35087614	chr15	+	35086962	35087553	True	NR_003144,NM_005159	chr15,chr15	+,-	LOC723972,ACTC1	441973,426
chr1:43296626-43298196	chr1	+	43296686	43297754	True	NM_018538,NM_199342	chr1,chr1	+,-	ERMAP,CCDC23	-5488,-13627
chrX:348128-348649	chrY	+	298200	298647	False	NR_027232,NM_013239	chrY,chrY	+,-	NCRNA00107,PPP2R3B	-66866,-510
chrX:348128-348649	chrX	+	348200	348647	True	NR_027232,NM_013239	chrX,chrX	+,-	NCRNA00107,PPP2R3B	-66866,-510
chr16:71522556-71522838	chr16	+	71522726	71522842	True	NM_005769,NM_006961	chr16,chr16	+,-	CHST4,ZNF19	37180,462
chr16:71662157-71663146	chr16	+	71662490	71663161	True	NM_000353,NM_001017967,NM_052858	chr16,chr16,chr16	-,+,+	TAT,MARVELD3,MARVELD3	-51492,-2471,-2471
chr17:15901269-15902159	chr17	+	15901424	15902056	True	NM_001042698,NR_037985,NM_017775,NM_001042697	chr17,chr17,chr17,chr17	-,+,+,-	ZSWIM7,TTC19,TTC19,ZSWIM7	1008,637,637,1008
chr9:36273925-36274251	chr9	+	36273949	36274075	True	NM_001128227,NM_001190388,NM_007096	chr9,chr9,chr9	-,-,+	GNE,GNE,CLTA	3028,3028,-83159
chrX:38080515-38080754	chrX	+	38080566	38080788	True	NM_006307,NM_000531,NM_001170752,NM_001170751,NM_001170750	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	SRPX,OTC,SRPX,SRPX,SRPX	-389,130947,-389,-389,-389
chr1:230991706-230993053	chr1	+	230991734	230993097	True	NM_016452,NM_001136495	chr1,chr1	+,-	CAPN9,C1orf198	-108624,48
chr5:55008448-55008935	chr5	+	55008448	55008839	True	NM_173514,NM_001166533	chr5,chr5	-,+	SLC38A9,DDX4	-285,25005
chr10:100177369-100177626	chr10	+	100177420	100177664	True	NM_014472,NM_032709	chr10,chr10	+,-	C10orf28,PYROXD2	-283090,-2442
chr1:161598987-161599588	chr1	+	161599268	161599604	True	NR_024151,NM_000570	chr1,chr1	+,-	HSPA7,FCGR3B	-23470,1604
chr1:161598987-161599588	chr1	+	161517910	161518247	False	NM_000569,NM_001127593,NM_001127592,NM_001127595,NM_001127596,NM_002155	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,+	FCGR3A,FCGR3A,FCGR3A,FCGR3A,FCGR3A,HSPA6	1621,2216,1621,2216,2216,-23925
chr21:44782528-44783406	chr21	+	44782558	44783252	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	86651,63800
chr2:40610428-40611952	chr2	+	40610531	40611746	True	NM_001112800,NM_152390	chr2,chr2	-,+	SLC8A1,TMEM178	45748,-717555
chr1:187339663-187340051	chr1	+	187339845	187340059	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-690286,-541864
chr1:229696234-229697682	chr1	+	229696666	229697211	True	NM_012089,NM_014777	chr1,chr1	-,+	ABCB10,URB2	-2224,64769
chr8:127594143-127594882	chr8	+	127594312	127594801	True	NM_001159542,NM_174911	chr8,chr8	+,-	POU5F1B,FAM84B	833055,-23601
chrX:30906441-30906878	chrX	+	30906593	30906823	True	NM_203391,NM_152787	chrX,chrX	+,-	GK,TAB3	-235168,738
chr3:10325247-10325492	chr3	+	10325285	10325519	True	NM_001134941,NM_001134946,NM_001134944,NM_001134945,NR_026829,NR_024133,NR_024138,NR_004431,NM_016362,NR_024145,NR_024144,NR_024132,NR_024146,NR_024134,NR_024135,NR_024136,NR_024137	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,+,-,-,+,-,+,+,-,+,-,-,-,-	GHRL,GHRL,GHRL,GHRL,C3orf42,GHRL,GHRL,GHRLOS,GHRL,GHRLOS,GHRLOS,GHRL,GHRLOS,GHRL,GHRL,GHRL,GHRL	6950,9162,9162,9162,583,9162,9162,1918,6950,1918,1918,9162,1918,9162,9162,9162,9162
chr3:69168047-69168364	chr3	+	69168158	69168404	True	NM_006407,NM_198271	chr3,chr3	+,-	ARL6IP5,LMOD3	-34119,3392
chr4:23883488-23884780	chr4	+	23883541	23884728	True	NM_003102,NM_013261	chr4,chr4	+,-	SOD3,PPARGC1A	912356,7023
chr1:148738924-148739747	chr1	+	148739459	148739525	True	NM_001164262,NM_001102663	chr1,chr1	-,+	PPIAL4F,NBPF16	-536923,-68
chr1:148738924-148739747	chr1	+	148577374	148577440	False	NM_001164262,NM_001102663	chr1,chr1	-,+	PPIAL4F,NBPF16	-374838,-68
chr9:129575470-129576792	chr9	+	129575649	129576225	True	NM_014007,NM_001135776,NM_012098	chr9,chr9,chr9	+,+,-	ZBTB43,ZBTB43,ANGPTL2	-8415,-8415,308881
chr3:55521499-55521768	chr3	+	55521618	55521810	True	NM_003392,NM_001012506	chr3,chr3	-,+	WNT5A,CCDC66	-287,1069373
chr17:8862233-8864151	chr17	+	8862489	8863995	True	NM_004822,NM_001142633	chr17,chr17	+,-	NTN1,PIK3R5	60863,5079
chr4:155715491-155717029	chr4	+	155715683	155717020	True	NM_144979,NM_021870	chr4,chr4	+,-	RBM46,FGG	-13318,-181781
chr7:73134597-73135047	chr7	+	73134628	73134844	True	NM_004603,NR_036247,NM_001165903	chr7,chr7,chr7	-,+,-	STX1A,MIR4284,STX1A	-611,-9033,-611
chr1:20304797-20305338	chr1	+	20304926	20305296	True	NM_000300,NM_001161729,NM_000929,NM_001161728,NM_001161727	chr1,chr1,chr1,chr1,chr1	-,-,+,-,-	PLA2G2A,PLA2G2A,PLA2G5,PLA2G2A,PLA2G2A	1686,906,91404,1686,1686
chr2:24165582-24165916	chr2	+	24165584	24165794	True	NM_181713,NM_017552	chr2,chr2	+,-	UBXN2A,ATAD2B	-2259,-15650
chr10:70749423-70750746	chr10	+	70749790	70750756	True	NM_001057,NM_015634	chr10,chr10	-,+	TACR2,KIAA1279	425974,-1371
chr11:27493090-27493461	chr11	+	27493113	27493495	True	NM_018490,NR_002832	chr11,chr11	-,+	LGR4,BDNF-AS1	889,34903
chr10:119132988-119133822	chr10	+	119133316	119133710	True	NM_173791,NM_003054	chr10,chr10	-,+	PDZD8,SLC18A2	1277,-132789
chr17:62209828-62210799	chr17	+	62209844	62210196	True	NR_004380,NM_001433	chr17,chr17	+,-	SNORD104,ERN1	13241,-2342
chr22:39267617-39267853	chr22	+	39267740	39267804	True	NM_014292,NM_145699	chr22,chr22	-,+	CBX6,APOBEC3A	504,85722
chr8:127568547-127568756	chr8	+	127568548	127568804	True	NM_001159542,NM_174911	chr8,chr8	+,-	POU5F1B,FAM84B	859052,1957
chr20:23586846-23587048	chr20	+	23586851	23587009	True	NM_001008693,NR_001279	chr20,chr20	-,+	CST9,CSTT	-241,-87119
chr1:162336880-162337318	chr1	+	162336989	162337283	True	NM_001126060,NM_182581	chr1,chr1	+,-	NOS1AP,C1orf111	-4267,9411
chr2:39889380-39889708	chr2	+	39889425	39889729	True	NM_152390,NM_001167959,NM_025264	chr2,chr2,chr2	+,+,-	TMEM178,TMEM178,THUMPD2	3305,2908,116737
chr11:72386035-72387583	chr11	+	72386172	72387580	True	NM_033388,NM_001146209,NM_002599	chr11,chr11,chr11	+,-,-	ATG16L2,PDE2A,PDE2A	137870,-6064,-678
chr6:44191820-44193097	chr6	+	44191836	44192949	True	NM_004955,NM_178148,NM_001078174,NM_001078175,NM_001078176,NM_001078177	chr6,chr6,chr6,chr6,chr6,chr6	+,-,+,+,+,+	SLC29A1,SLC35B2,SLC29A1,SLC29A1,SLC29A1,SLC29A1	-4645,32387,-4645,-591,-591,-524
chr11:101779365-101780039	chr11	+	101779681	101780087	True	NM_020802,NM_178127	chr11,chr11	+,-	KIAA1377,ANGPTL5	5658,7216
chr1:90461318-90462220	chr1	+	90461487	90462095	True	NM_182976,NM_182975,NR_002830	chr1,chr1,chr1	+,+,-	ZNF326,ZNF326,GEMIN8P4	-871,-871,-962
chr14:103764382-103766125	chr14	+	103764747	103765924	True	NR_033938,NM_001969	chr14,chr14	-,+	LOC100131366,EIF5	-109382,34568
chr2:229440688-229442337	chr2	+	229440713	229442194	True	NM_178821,NM_030623	chr2,chr2	+,-	WDR69,SPHKAP	-704437,-394352
chr22:42485563-42486040	chr22	+	42485563	42485943	True	NM_033318,NM_002490,NR_034118	chr22,chr22,chr22	+,-,+	C22orf32,NDUFA6,LOC100132273	-9915,995,993
chr12:49109600-49110054	chr12	+	49109769	49110018	True	NM_001240,NR_029448	chr12,chr12	-,+	CCNT1,LOC255411	814,11199
chr4:71341648-71342539	chr4	+	71341655	71342576	True	NM_144646,NM_001145007,NM_152291	chr4,chr4,chr4	-,+,+	IGJ,MUC7,MUC7	189822,-4032,-3873
chr2:228237727-228238366	chr2	+	228237726	228238368	True	NM_020194,NM_024795	chr2,chr2	+,-	MFF,TM4SF20	-45549,5704
chr12:123701993-123702446	chr12	+	123702019	123702320	True	NM_022782,NM_152269	chr12,chr12	-,+	MPHOSPH9,C12orf65	4178,15523
chr19:49536746-49537176	chr19	+	49536756	49537068	True	NR_024244,NM_033378,NM_033377,NR_004383,NM_000737	chr19,chr19,chr19,chr19,chr19	-,+,-,+,-	SNAR-G2,CGB2,CGB1,SNAR-G1,CGB	-1712,-1677,3173,3208,-9163
chr19:49536746-49537176	chr19	-	49550319	49550385	False	NM_033183,NM_033142,NM_033043	chr19,chr19,chr19	-,-,+	CGB8,CGB7,CGB5	2033,8662,-3268
chr1:174848664-174849888	chr1	+	174848712	174849503	True	NM_001035230,NM_022100	chr1,chr1	+,-	RABGAP1L,MRPS14	-4092,143151
chr7:99041131-99042472	chr7	+	99041561	99042487	True	NM_015545,NM_006693,NM_001081559	chr7,chr7,chr7	-,+,+	PTCD1,CPSF4,CPSF4	-5099,-5057,-5057
chr4:123170974-123171627	chr4	+	123170979	123171677	True	NM_000586,NM_015312	chr4,chr4	-,+	IL2,KIAA1109	206025,-79272
chr1:54410702-54411171	chr1	+	54410874	54411054	True	NM_052940,NM_016126	chr1,chr1	+,-	LRRC42,HSPB11	982,284
chr7:44163696-44163939	chr7	+	44163797	44163867	True	NM_001129,NM_006230,NM_001127218	chr7,chr7,chr7	+,-,-	AEBP1,POLD2,POLD2	-19888,-650,-650
chr11:61128892-61129188	chr11	+	61129000	61129170	True	NM_001161452,NM_016464,NM_153611,NM_001161454,NR_028473	chr11,chr11,chr11,chr11,chr11	-,+,-,-,+	CYBASC3,TMEM138,CYBASC3,CYBASC3,TMEM138	-4639,302,635,635,302
chr20:3645294-3645841	chr20	+	3645462	3645792	True	NM_145762,NM_022139,NM_001197327	chr20,chr20,chr20	-,-,+	GFRA4,GFRA4,HSPA12B	-1416,-1416,67524
chr19:43262339-43262972	chr19	+	43262556	43262903	True	NM_001130168,NR_036584,NM_182707,NM_001130167	chr19,chr19,chr19,chr19	-,+,-,-	PSG8,LOC100289650,PSG8,PSG8	6979,63111,6979,6979
chr19:43262339-43262972	chr19	+	43237637	43237688	False	NR_036584,NM_021016	chr19,chr19	+,-	LOC100289650,PSG3	88326,7031
chr12:125399536-125399808	chr12	+	125399702	125399764	True	NM_021009,NM_080626	chr12,chr12	-,+	UBC,BRI3BP	-115,78429
chr3:196017647-196019334	chr3	+	196018185	196019311	True	NM_005017,NM_152672	chr3,chr3	-,+	PCYT1A,OSTalpha	-3601,-74866
chr6:106774374-106776266	chr6	+	106774540	106775893	True	NM_004849,NM_001624	chr6,chr6	-,+	ATG5,AIM1	-845,183836
chr11:123944205-123945246	chr11	+	123944306	123945286	True	NM_198315,NM_001004463	chr11,chr11	+,-	VWA5A,OR10G7	40824,-34598
chr6:110789967-110790451	chr6	+	110789995	110790456	True	NM_015891,NM_033125	chr6,chr6	+,-	CDC40,SLC22A16	-288422,7439
chr19:53288138-53288556	chr19	+	53288379	53288503	True	NM_198457,NR_023311	chr19,chr19	-,+	ZNF600,ZNF137P	1587,-188493
chr2:91847864-91848122	chr2	+	91847962	91848122	True	NR_003503,NR_027238	chr2,chr2	+,-	GGT8P,LOC654342	115245,13
chr2:91847864-91848122	chr1	-	148928180	148928284	False	NR_027355,NR_027354,NM_001024599,NR_027356	chr1,chr1,chr1,chr1	+,+,-,+	LOC645166,LOC645166,HIST2H2BF,LOC645166	1,2120,471041,1
chr13:31782711-31783060	chr13	+	31782774	31782968	True	NM_194318,NM_006644	chr13,chr13	+,-	B3GALTL,HSPH1	-8713,-46657
chr2:33161913-33162409	chr2	+	33161972	33162249	True	NM_015475,NR_027097	chr2,chr2	-,+	FAM98A,LOC100271832	662170,-9830
chr16:30709482-30709882	chr16	+	30709561	30709657	True	NM_001014979,NM_006662	chr16,chr16	-,+	C16orf93,SRCAP	63958,804
chr7:50775133-50776140	chr7	+	50775148	50776156	True	NR_033845,NM_001001550	chr7,chr7	+,-	LOC100129427,GRB10	-175742,-2150
chr15:69372521-69374050	chr15	+	69372787	69374070	True	NR_026949,NM_006305	chr15,chr15	+,-	NCRNA00277,ANP32A	73,-259526
chr1:6641101-6641578	chr1	+	6641100	6641386	True	NM_014851,NM_005341	chr1,chr1	-,+	KLHL21,ZBTB48	21593,-1088
chr11:65083712-65084722	chr11	+	65083834	65084602	True	NM_001077241,NM_006779	chr11,chr11	-,+	SLC25A45,CDC42EP2	65590,-1554
chrY:6296219-6296592	chrY	+	6296244	6296594	True	NR_001535,NR_003590,NR_001536	chrY,chrY,chrY	+,-,-	TTTY21,TTTY2B,TTTY2	14880,3,3
chrY:6296219-6296592	chrY	-	9573785	9574135	False	NR_003590,NR_003588,NR_001536	chrY,chrY,chrY	+,-,+	TTTY2B,TTTY21B,TTTY2	-3,-14880,-3
chr17:37857146-37858444	chr17	+	37857454	37858361	True	NM_033419,NM_004448	chr17,chr17	-,+	PGAP3,ERBB2	-13144,-1251
chr12:75603318-75603746	chr12	+	75603380	75603782	True	NM_153748,NM_152779,NM_139136,NM_139137	chr12,chr12,chr12,chr12	-,+,-,-	KCNC2,GLIPR1L1,KCNC2,KCNC2	-19,124680,-19,-19
chr17:44321201-44321581	chr17_ctg5_hap1	-	545406	545489	False	NM_001193465,NR_034172	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	KIAA1267,LOC644246	18008,49968
chr17:44321201-44321581	chr17_ctg5_hap1	+	1188933	1189016	False	NR_026901,NR_037772	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LOC644172,CRHR1	-566,-18480
chr17:44321201-44321581	chr17_ctg5_hap1	+	1408493	1408576	False	NR_002940,NM_016632	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LRRC37A4,ARL17A	72800,105379
chr17:44321201-44321581	chr17	+	44321415	44321489	True	NM_001193465,NR_034172	chr17,chr17	-,+	KIAA1267,LOC644246	-18675,-50527
chr10:115934696-115936019	chr10	+	115934789	115936021	True	NR_031747,NM_198795,NM_018017	chr10,chr10,chr10	-,+,-	MIR2110,TDRD1,C10orf118	-851,3007,-425
chr5:137911593-137911865	chr5	+	137911637	137911834	True	NM_001964,NM_004134	chr5,chr5	+,-	EGR1,HSPA9	-110509,-319
chr19:10048226-10048878	chr19	+	10048397	10048665	True	NM_058164,NM_015725	chr19,chr19	-,+	OLFM2,RDH8	-1327,75259
chr11:2161381-2161648	chr11	+	2161385	2161603	True	NM_001127598,NR_028043,NM_000612,NM_001007139,NR_030158,NR_028044	chr11,chr11,chr11,chr11,chr11,chr11	-,+,-,-,-,+	IGF2,IGF2AS,IGF2,IGF2,MIR483,IGF2AS	788,154,-1181,9280,-5946,154
chr2:73459387-73460084	chr2	+	73459492	73459932	True	NM_001009570,NM_006429,NM_001166284,NM_001166285,NR_029403,NR_029402,NM_032319	chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,+,+,-	CCT7,CCT7,CCT7,CCT7,CCT7,CCT7,C2orf7	1431,1431,1431,1431,1431,1431,474
chr16:3082091-3082542	chr16	+	3082239	3082585	True	NM_001142350,NM_024339,NM_017885,NM_001103175,NM_001002017,NM_001002018	chr16,chr16,chr16,chr16,chr16,chr16	+,+,-,-,-,-	THOC6,THOC6,HCFC1R1,CCDC64B,HCFC1R1,HCFC1R1	-8258,-8258,-7952,3007,-7952,-7952
chr1:45268737-45269304	chr1	+	45268785	45269351	True	NM_001013632,NM_004073,NM_001136537	chr1,chr1,chr1	-,+,+	TCTEX1D4,PLK3,BTBD19	3656,-2800,4802
chr17:73631710-73632080	chr17	+	73631743	73632071	True	NR_028439,NM_001162995,NM_004259	chr17,chr17,chr17	+,+,-	LOC643008,LOC643008,RECQL5	603,-2280,31244
chrX:77225297-77226023	chrX	+	77225461	77225871	True	NM_001029891,NM_000052	chrX,chrX	-,+	PGAM4,ATP7A	-326,-59325
chr2:230933690-230934006	chr2	+	230933697	230933809	True	NM_174899,NM_152527	chr2,chr2	+,-	FBXO36,SLC16A14	-146541,-4
chr5:131634396-131635281	chr5	+	131634545	131635081	True	NM_003059,NR_037500	chr5,chr5	+,-	SLC22A4,MIR3936	-4451,66266
chr22:21634713-21635623	chr22	+	21635313	21635395	True	NR_003700,NR_024583	chr22,chr22	-,+	PI4KAP2,POM121L8P	236435,1318
chr22:21634713-21635623	chr22	-	21483711	21483793	False	NR_037566,NR_002829	chr22,chr22	+,-	BCRP2,P2RX6P	-26457,-85173
chr2:176947784-176948001	chr2	+	176947783	176947941	True	NM_001080458,NM_000523	chr2,chr2	-,+	EVX2,HOXD13	799,9590
chr16:51683173-51683967	chr16	+	51683448	51683934	True	NM_002968,NM_001042412	chr16,chr16	-,+	SALL1,CYLD	-498265,-907470
chr3:43024223-43024503	chr3	+	43024229	43024521	True	NM_004391,NM_001129908	chr3,chr3	-,+	CYP8B1,FAM198A	-106596,-3521
chr11:77898648-77899139	chr11	+	77898666	77899121	True	NM_001029859,NM_020798	chr11,chr11	-,+	KCTD21,USP35	594,736
chr20:23669324-23669597	chr20	+	23669409	23669537	True	NM_001899,NR_001279	chr20,chr20	-,+	CST4,CSTT	175,-169677
chr9:72279047-72280810	chr9	+	72279176	72280709	True	NM_001163,NM_001010940	chr9,chr9	-,+	APBA1,C9orf135	6623,155021
chr1:227060732-227061207	chr1	+	227060888	227061077	True	NM_002221,NM_012486,NM_000447	chr1,chr1,chr1	-,+,+	ITPKB,PSEN2,PSEN2	-134012,-2667,-2667
chr15:56201973-56203818	chr15	+	56201984	56203612	True	NM_198400,NM_198524	chr15,chr15	-,+	NEDD4,TEX9	5767,454031
chr7:128471263-128471598	chr7	+	128471351	128471595	True	NM_001127487,NM_001708,NM_001458	chr7,chr7,chr7	+,-,+	FLNC,OPN1SW,FLNC	-919,-55507,-919
chr17:27949197-27949471	chr17	+	27949207	27949391	True	NM_032854,NM_152345	chr17,chr17	-,+	CORO6,ANKRD13B	-766,-28731
chr1:32645806-32646012	chr1	+	32645846	32645966	True	NM_175852,NM_019118	chr1,chr1	+,-	TXLNA,TMEM234	-552,42010
chr5:172661556-172661848	chr5	+	172661736	172661890	True	NM_004387,NM_013980,NM_001166175,NM_001166176	chr5,chr5,chr5,chr5	-,+,-,-	NKX2-5,BNIP1,NKX2-5,NKX2-5	475,-90342,475,475
chr1:231158337-231158770	chr1	+	231158472	231158783	True	NM_022786,NR_031593	chr1,chr1	+,-	ARV1,MIR1182	-43700,-2802
chr20:57415886-57416213	chr20	+	57415894	57416210	True	NM_016592,NR_002785	chr20,chr20	+,-	GNAS,GNAS-AS1	-1150,9798
chr7:50517748-50518161	chr7	+	50517756	50518210	True	NM_001042762,NM_022116,NR_033845	chr7,chr7,chr7	-,-,+	FIGNL1,FIGNL1,LOC100129427	34,34,81246
chr13:46962261-46962751	chr13	+	46962520	46962756	True	NM_001164211,NM_025113	chr13,chr13	+,-	LRCH1,C13orf18	164539,-885
chr18:21084127-21085180	chr18	+	21084185	21084940	True	NM_013326,NM_032933	chr18,chr18	+,-	C18orf8,C18orf45	-774,-66260
chr12:69864178-69864395	chr12	+	69864177	69864369	True	NM_006654,NM_001042555,NR_037475	chr12,chr12,chr12	+,+,-	FRS2,FRS2,MIR3913-1	-99,-99,114284
chr22:35777259-35778135	chr22	+	35777410	35778146	True	NM_005368,NM_002133	chr22,chr22	-,+	MB,HMOX1	235295,-401
chr3:196013309-196013639	chr3	+	196013340	196013513	True	NM_005017,NM_152672	chr3,chr3	-,+	PCYT1A,OSTalpha	1124,-70021
chr1:190412389-190413311	chr1	+	190412624	190413082	True	NM_199051,NR_033922	chr1,chr1	-,+	FAM5C,LOC440704	33727,180937
chr7:47577231-47577495	chr7	+	47577272	47577483	True	NM_001123065,NM_022748	chr7,chr7	+,-	C7orf65,TNS3	117358,44310
chr16:1667248-1668205	chr16	+	1667347	1668175	True	NM_020825,NM_014714	chr16,chr16	+,-	CRAMP1L,IFT140	-2757,-5238
chr4:101342519-101344187	chr4	+	101342556	101344203	True	NM_001159694,NR_002799	chr4,chr4	-,+	EMCN,LOC256880	95097,-470978
chr2:102989906-102991160	chr2	+	102990158	102990967	True	NM_003855,NM_032718	chr2,chr2	+,-	IL18R1,MFSD9	-11113,362427
chr21:27007822-27009121	chr21	+	27007899	27009164	True	NM_021219,NM_080794	chr21,chr21	+,-	JAM2,MRPL39	2424,-28098
chr1:201958108-201958433	chr1	+	201958117	201958459	True	NM_020216,NM_012134	chr1,chr1	+,-	RNPEP,LMOD1	-6404,-42401
chr11:123910400-123912093	chr11	+	123910879	123912113	True	NM_001004464,NM_001004463	chr11,chr11	+,-	OR10G8,OR10G7	-10611,-1171
chr1:24018626-24019374	chr1	+	24018633	24019358	True	NM_001199802,NM_001127621,NM_000975	chr1,chr1,chr1	+,-,+	RPL11,GALE,RPL11	-415,106759,-415
chr11:45117403-45118952	chr11	+	45117564	45118964	True	NM_006034,NM_020229	chr11,chr11	-,+	TP53I11,PRDM11	-144956,-2052
chr9:131084846-131085182	chr9	+	131084901	131085119	True	NM_016035,NM_015679	chr9,chr9	+,-	COQ4,TRUB2	-161,-204
chr1:1361664-1362198	chr1	+	1361725	1362103	True	NM_199121,NM_022834,NR_026871,NM_001146685,NM_001145210	chr1,chr1,chr1,chr1,chr1	+,+,-,+,-	VWA1,VWA1,LOC441869,TMEM88B,LOC441869	8799,8799,-5075,-268,-5075
chr12:16070620-16071218	chr12	+	16070699	16071015	True	NM_004447,NM_015954	chr12,chr12	-,+	EPS8,DERA	-128189,-6571
chr21:44499055-44499486	chr21	+	44499468	44499528	True	NM_000394,NM_000071,NM_001178009,NM_001178008	chr21,chr21,chr21,chr21	+,-,-,-	CRYAA,CBS,CBS,CBS	89612,-3428,-2996,-2996
chr11:36352402-36353525	chr11	+	36352846	36353522	True	NM_014186,NM_001160167	chr11,chr11	-,+	COMMD9,PRR5L	-41847,-35182
chr17:34901680-34902379	chr17	+	34901898	34902396	True	NM_024835,NM_001033580	chr17,chr17	+,-	GGNBP2,MYO19	-1212,-10593
chr21:27900091-27900879	chr21	+	27900090	27900754	True	NM_002040,NM_052954	chr21,chr21	+,-	GABPA,CYYR1	-792815,44877
chr22:50707495-50707709	chr22	+	50707500	50707688	True	NM_031454,NM_002969,NM_002751	chr22,chr22,chr22	+,-,-	SELO,MAPK12,MAPK11	-68143,-7411,1141
chr3:187386920-187387913	chr3	+	187387040	187387878	True	NM_001048,NR_034062	chr3,chr3	-,+	SST,LOC100131635	373,32275
chr4:186066731-186067038	chr4	+	186066742	186067052	True	NM_020827,NM_001151	chr4,chr4	-,+	KIAA1430,SLC25A4	58180,-2376
chr3:136533539-136534364	chr3	+	136533925	136534078	True	NM_001097599,NM_005862,NM_001097600,NM_025246	chr3,chr3,chr3,chr3	+,-,+,+	TMEM22,STAG1,TMEM22,TMEM22	3782,-62680,3782,3782
chr3:184058199-184059096	chr3	+	184058535	184059121	True	NM_144635,NM_001171087,NM_001171093	chr3,chr3,chr3	+,-,+	FAM131A,CLCN2,FAM131A	-3315,20320,-4874
chr5:72257711-72258642	chr5	+	72257711	72258336	True	NM_001146032,NM_138782,NM_152625	chr5,chr5,chr5	+,+,-	FCHO2,FCHO2,ZNF366	-5961,-5961,-454462
chr16:28944458-28944697	chr16	+	28944493	28944739	True	NM_024816,NM_001770,NM_001178098	chr16,chr16,chr16	-,+,+	RABEP2,CD19,CD19	-7961,-1284,-1284
chr10:128076999-128077232	chr10	+	128077039	128077099	True	NM_021641,NM_145235,NM_003474	chr10,chr10,chr10	-,+,-	ADAM12,FANK1,ADAM12	78,-491982,78
chr19:48544153-48545922	chr19	+	48544481	48545705	True	NM_022142,NM_019855	chr19,chr19	+,-	ELSPBP1,CABP5	-46625,1649
chr1:208777099-208778788	chr1	+	208777124	208778807	True	NR_026817,NM_025179	chr1,chr1	+,-	LOC148696,PLXNA2	-785452,-359459
chr20:13773316-13775016	chr20	+	13773468	13774908	True	NM_001039375,NR_029377,NM_024120,NM_016649	chr20,chr20,chr20,chr20	+,+,+,-	C20orf7,C20orf7,C20orf7,ESF1	-7848,-7848,-7848,-7936
chr1:13912114-13912681	chr1	+	13912131	13912719	True	NM_006474,NM_001010847,NM_001006625,NM_001006624,NM_198389	chr1,chr1,chr1,chr1,chr1	+,-,+,+,+	PDPN,LRRC38,PDPN,PDPN,PDPN	-1931,-71889,-216,-216,-1931
chr6:129203482-129204123	chr6	+	129203482	129204138	True	NM_001135648,NM_001079823,NM_000426	chr6,chr6,chr6	-,+,+	PTPRK,LAMA2,LAMA2	-361612,147,147
chr11:286934-287896	chr11	+	287173	287945	True	NM_138329,NM_001025295,NM_025092	chr11,chr11,chr11	+,-,+	NLRP6,IFITM5,ATHL1	-8654,11631,1192
chr3:44622323-44622548	chr3	+	44622366	44622488	True	NM_173658,NM_181489	chr3,chr3	+,-	ZNF660,ZNF445	3967,-103204
chr20:31776418-31777730	chr20	+	31776433	31777560	True	NM_080675,NR_026760	chr20,chr20	-,+	SUN5,BASE	-184194,3850
chr1:27217095-27217356	chr1	+	27217094	27217294	True	NM_018066,NM_006142,NM_022078	chr1,chr1,chr1	-,+,-	GPN2,SFN,GPATCH3	-225,-27512,9718
chr6:43457638-43458478	chr6	+	43457642	43458514	True	NM_001012974,NM_001146017	chr6,chr6	-,+	C6orf154,TJAP1	19960,-371
chr13:67931383-67931928	chr13	+	67931446	67931834	True	NR_002717,NM_203487	chr13,chr13	+,-	ATXN8OS,PCDH9	2749510,-126978
chr8:132051917-132052248	chr8	+	132052000	132052104	True	NM_015137,NM_001115	chr8,chr8	+,-	EFR3A,ADCY8	864251,781
chr1:154301498-154301887	chr1	+	154301670	154301930	True	NM_020452,NM_080429,NM_138740,NM_001005855	chr1,chr1,chr1,chr1	+,+,-,+	ATP8B2,AQP10,C1orf43,ATP8B2	-1445,-8129,-108397,-3685
chr1:40218922-40219581	chr1	+	40219110	40219592	True	NM_022120,NM_001195007	chr1,chr1	-,+	OXCT2,PPIE	17478,-14644
chr1:149887408-149888335	chr1	+	149887475	149888285	True	NM_014849,NM_016074	chr1,chr1	-,+	SV2A,BOLA1	1199,-16371
chr19:44453352-44455200	chr19	+	44453624	44455185	True	NM_003425,NM_013359	chr19,chr19	-,+	ZNF45,ZNF221	-14213,211
chr3:50356231-50357320	chr3	+	50356290	50357299	True	NM_007275,NM_007022,NM_033158,NM_153281,NM_003773	chr3,chr3,chr3,chr3,chr3	-,+,-,-,-	TUSC2,CYB561D2,HYAL2,HYAL1,HYAL2	8420,30997,3033,-6478,3033
chr9:115510198-115510978	chr9	+	115510383	115510754	True	NM_001012994,NM_021218	chr9,chr9	+,-	SNX30,C9orf80	2379,-29996
chr19:39468484-39468781	chr19	+	39468644	39468778	True	NM_024907,NM_033363	chr19,chr19	-,+	FBXO17,MRPS12	-2264,-47108
chr6:112373689-112374785	chr6	+	112373956	112374831	True	NM_016262,NM_198239,NM_003880	chr6,chr6,chr6	-,+,+	TUBE1,WISP3,WISP3	33971,539,446
chr19:51515060-51515884	chr19	+	51515163	51515930	True	NM_012315,NM_145888,NM_001077500,NM_002776,NM_014441	chr19,chr19,chr19,chr19,chr19	-,-,-,-,+	KLK9,KLK10,KLK10,KLK10,SIGLEC9	-2273,7075,7552,7403,112206
chr4:81118867-81119094	chr4	+	81118871	81119093	True	NM_001099403,NM_001145794	chr4,chr4	+,-	PRDM8,ANTXR2	-271,-124394
chr11:49642562-49643085	chr11	+	49642782	49643092	True	NR_027044,NM_001005270	chr11,chr11	+,-	LOC440040,OR4C12	-62761,361035
chr22:42078386-42078811	chr22	+	42078388	42078605	True	NM_005008,NM_001003796,NM_001142964	chr22,chr22,chr22	-,-,+	NHP2L1,NHP2L1,C22orf46	2,6359,7941
chr1:220445098-220445423	chr1	+	220445211	220445391	True	NR_001587,NM_018060,NM_012414	chr1,chr1,chr1	-,+,-	AURKAPS1,IARS2,RAB3GAP2	-4154,-177807,502
chr12:31879254-31880806	chr12	+	31879419	31880560	True	NR_004854,NM_001135863,NM_001113402	chr12,chr12,chr12	-,+,-	AMN1,METTL20,AMN1	1609,-66868,1609
chr8:144719331-144719810	chr8	+	144719415	144719699	True	NM_001082480,NM_003313	chr8,chr8	+,-	ZNF623,TSTA3	-1093,-19683
chr1:1847857-1848342	chr1	+	1847901	1848339	True	NM_138705,NM_178545	chr1,chr1	+,-	CALML6,TMEM52	-1686,2451
chr16:2561107-2561755	chr16	+	2561312	2561794	True	NM_001145815,NM_001048212,NM_015944,NM_001694,NM_001198569	chr16,chr16,chr16,chr16,chr16	+,-,+,+,+	AMDHD2,CEMP1,AMDHD2,ATP6V0C,ATP6V0C	8568,19665,8568,2076,1932
chr5:150681216-150681996	chr5	+	150681408	150681953	True	NM_181774,NM_001167607,NM_001145017	chr5,chr5,chr5	-,+,-	SLC36A3,GM2A,SLC36A3	1438,-48856,1438
chr12:53296650-53297105	chr12	+	53296839	53297138	True	NM_199187,NM_002273	chr12,chr12	+,-	KRT18,KRT8	45516,1780
chr2:68998592-68999592	chr2	+	68998629	68999590	True	NM_014482,NM_001166276,NM_014882	chr2,chr2,chr2	-,+,+	BMP10,ARHGAP25,ARHGAP25	99109,2342,2342
chr11:18195420-18196728	chr11	+	18195556	18196496	True	NR_026576,NM_054032	chr11,chr11	-,+	SAA3P,MRGPRX4	-57877,-1223
chr11:102980245-102980990	chr11	+	102980296	102980718	True	NM_001377,NM_001080463,NM_032299	chr11,chr11,chr11	+,+,-	DYNC2H1,DYNC2H1,DCUN1D5	-187,-187,-17352
chrX:40595186-40596564	chrX	+	40595252	40596140	True	NM_004229,NM_001195522	chrX,chrX	-,+	MED14,LOC347411	-448,-112485
chr2:37370533-37371882	chr2	+	37370534	37371658	True	NM_001135652,NR_037879	chr2,chr2	-,+	EIF2AK2,LOC100505876	3357,51976
chr1:24649461-24650567	chr1	+	24649522	24650617	True	NM_198173,NM_021180,NM_001195010,NM_001199013,NM_198174	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	GRHL3,GRHL3,GRHL3,C1orf201,GRHL3	-3768,-50,-3524,89696,-3768
chr11:113343073-113344186	chr11	+	113343083	113344222	True	NM_016574,NM_178510,NM_000795	chr11,chr11,chr11	-,+,-	DRD2,ANKK1,DRD2	1829,-84628,1829
chr8:57906449-57906846	chr8	+	57906576	57906856	True	NR_026772,NM_017813	chr8,chr8	+,-	C8orf71,IMPAD1	285245,-149
chr2:133427752-133427969	chr2	+	133427757	133427825	True	NM_001077427,NM_001508,NM_144586	chr2,chr2,chr2	-,+,-	LYPD1,GPR39,LYPD1	1295,-253661,706
chr1:149888707-149889304	chr1	+	149888839	149889248	True	NM_014849,NM_016074	chr1,chr1	-,+	SV2A,BOLA1	236,-17735
chr7:66093390-66093654	chr7	+	66093557	66093675	True	NM_153033,NM_001167961,NR_002933	chr7,chr7,chr7	+,+,-	KCTD7,KCTD7,LOC493754	192,192,-50059
chr1:53608177-53608960	chr1	+	53608283	53608999	True	NM_000098,NM_006671	chr1,chr1	+,-	CPT2,SLC1A7	53101,6
chr6:26284390-26285619	chr6	+	26284883	26285635	True	NM_003525,NM_003543	chr6,chr6	+,-	HIST1H2BI,HIST1H4H	-11730,142
chr18:14337023-14338285	chr18	+	14337185	14338331	True	NR_024076,NR_026756	chr18,chr18	-,+	CXADRP3,LOC284233	160424,-74
chr14:64321233-64322766	chr14	+	64321531	64322747	True	NM_182914,NM_015180,NM_030791	chr14,chr14,chr14	+,+,-	SYNE2,SYNE2,SGPP1	-1912,-1912,-126775
chr8:90921161-90922371	chr8	+	90921448	90922390	True	NM_004337,NM_002485,NM_001126111	chr8,chr8,chr8	+,-,+	OSGIN2,NBN,OSGIN2	-7410,74561,-6744
chr6:112573702-112574879	chr6	+	112573864	112574836	True	NM_001013734,NM_001105209,NM_001105208,NM_002290,NM_001105207,NM_001105206	chr6,chr6,chr6,chr6,chr6,chr6	+,-,-,-,-,-	RFPL4B,LAMA4,LAMA4,LAMA4,LAMA4,LAMA4	93695,1042,1042,1042,1042,1042
chr10:45455255-45455556	chr10	+	45455282	45455578	True	NR_033842,NM_032023	chr10,chr10	-,+	LOC220980,RASSF4	-145,-114
chr17:46913270-46914107	chr17	+	46913462	46914088	True	NM_005831,NM_001130918	chr17,chr17	+,-	CALCOCO2,TTLL6	-5141,-18993
chr5:167950300-167952295	chr5	+	167950599	167951693	True	NR_029520,NR_024356	chr5,chr5	-,+	MIR103-1,FBLL1	36335,4888
chr16:30757873-30759462	chr16	+	30757982	30759478	True	NM_001172432,NM_000294,NM_001014979	chr16,chr16,chr16	+,+,-	PHKG2,PHKG2,C16orf93	141,141,14137
chr1:21673740-21674862	chr1	+	21673907	21674647	True	NM_032264,NM_001113348	chr1,chr1	+,-	NBPF3,ECE1	91983,-1873
chr19:510227-510549	chr19	+	510383	510587	True	NM_033513,NM_182577	chr19,chr19	+,-	C19orf20,ODF3L2	-2937,-35400
chr10:29698967-29699688	chr10	+	29699072	29699475	True	NR_030335,NR_003930	chr10,chr10	-,+	MIR604,LOC387647	134602,-622
chr10:135383850-135384067	chr10	+	135384055	135384115	True	NM_001143764,NR_033789,NM_001143763,NM_130784,NM_000773	chr10,chr10,chr10,chr10,chr10	-,-,-,-,+	SYCE1,SPRNP1,SYCE1,SYCE1,CYP2E1	-4917,-593,-4917,-1179,-43239
chr10:135383850-135384067	chr10	+	135239260	135239320	False	NR_002934,NM_001012508	chr10,chr10	+,-	LOC619207,SPRN	28111,-1139
chr1:11538240-11538608	chr1	+	11538243	11538497	True	NM_012168,NM_020780	chr1,chr1	-,+	FBXO2,PTCHD2	176441,797
chr9:38423457-38423999	chr9	+	38423651	38423999	True	NM_001007563,NM_000692	chr9,chr9	-,+	IGFBPL1,ALDH1B1	495,-31000
chr11:122851448-122852345	chr11	+	122851505	122852383	True	NR_027288,NM_001098169	chr11,chr11	+,-	LOC341056,BSX	35890,46
chr2:85899509-85900997	chr2	+	85899784	85901034	True	NM_000542,NM_198843,NM_006433	chr2,chr2,chr2	-,-,+	SFTPB,SFTPB,GNLY	-3920,-3920,20379
chr14:77642303-77643906	chr14	+	77642456	77643606	True	NM_174976,NM_020431	chr14,chr14	-,+	ZDHHC22,TMEM63C	-34322,4495
chr7:148846648-148847573	chr7	+	148847052	148847336	True	NM_170686,NM_001001661	chr7,chr7	+,-	ZNF398,ZNF425	-2543,-23614
chr5:175394178-175394932	chr5	+	175394190	175394654	True	NM_032361,NM_001008220	chr5,chr5	-,+	THOC3,CPLX2	941,-95740
chr5:175394178-175394932	chr5	-	177303409	177303612	False	NR_003615,NM_173663	chr5,chr5	+,-	LOC728554,FAM153A	-1205,-95904
chr1:95642870-95643597	chr1	+	95642926	95643482	True	NM_001128142,NM_144988	chr1,chr1	+,-	RWDD3,ALG14	56228,-104419
chr15:44581247-44581505	chr15	+	44581287	44581505	True	NM_032892,NM_177974,NM_138423	chr15,chr15,chr15	-,+,+	FRMD5,CASC4,CASC4	-93858,-429,-429
chr2:23679447-23679895	chr2	+	23679479	23679627	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	470365,-71232
chr9:43133912-43134338	chr9	+	43133963	43134309	True	NM_001012419,NR_026558,NM_001012421	chr9,chr9,chr9	-,+,-	ANKRD20A3,AQP7P3,ANKRD20A2	-419,-275862,-419
chr9:43133912-43134338	chr9	-	42367593	42367643	False	NR_003670,NM_001012419,NM_001012421	chr9,chr9,chr9	-,+,+	KGFLP2,ANKRD20A3,ANKRD20A2	-348009,659,659
chr9:43133912-43134338	chr9	-	67925995	67926045	False	NR_027422,NM_001012419,NM_032250	chr9,chr9,chr9	-,+,+	FAM27B,ANKRD20A3,ANKRD20A1	-131806,715,715
chr9:43133912-43134338	chr9	-	69381215	69381561	False	NM_001085457,NM_001098805	chr9,chr9	-,+	CBWD6,ANKRD20A4	-118622,419
chr1:206328994-206330108	chr1	+	206329027	206330141	True	NM_001007544,NM_148964	chr1,chr1	-,+	C1orf186,CTSE	-40380,-11619
chr18:598804-599276	chr18	+	598921	599313	True	NM_014410,NM_001012716	chr18,chr18	+,-	CLUL1,C18orf56	-1987,59083
chr22:35542703-35543628	chr22	+	35542759	35543579	True	NM_001008494,NM_005368	chr22,chr22	+,-	ISX,MB	-80680,469855
chr10:103536700-103538474	chr10	+	103536828	103538422	True	NM_006993,NM_033164,NM_033165,NM_033163,NR_036114,NM_006119	chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,+,-	NPM3,FGF8,FGF8,FGF8,MIR3158-1,FGF8	4798,-1069,-1069,-1069,-175708,-1069
chr1:1858054-1858525	chr1	+	1858075	1858435	True	NM_138705,NM_178545	chr1,chr1	+,-	CALML6,TMEM52	-11860,-7335
chr1:229569684-229569967	chr1	+	229569742	229569954	True	NM_006542,NM_001100	chr1,chr1	+,-	SPHAR,ACTA1	-129664,-5
chr17:79447772-79448303	chr17	+	79447869	79448149	True	NM_001077182,NR_036152	chr17,chr17	+,-	FSCN2,MIR3186	47267,-29655
chr22:42323662-42323931	chr22	+	42323797	42323947	True	NM_052945,NR_024355	chr22,chr22	-,+	TNFRSF13C,LOC339674	-976,24243
chr17:57283649-57284119	chr17	+	57283784	57284027	True	NM_182620,NM_018149	chr17,chr17	-,+	SKA2,C17orf71	-50984,3343
chr17:57283649-57284119	chr17	+	57282447	57282690	False	NM_182620,NM_018149	chr17,chr17	-,+	SKA2,C17orf71	-49647,4680
chr20:43344265-43345394	chr20	+	43344353	43345277	True	NR_034104,NM_003881	chr20,chr20	-,+	LOC79015,WISP2	-43973,-526
chr22:43582317-43582678	chr22	+	43582322	43582704	True	NM_015140,NM_007311	chr22,chr22	-,+	TTLL12,TSPO	483,-34838
chr1:111440719-111441855	chr1	+	111441017	111441855	True	NM_000560,NM_001006945	chr1,chr1	+,-	CD53,C1orf103	-25364,64761
chr13:42505207-42507032	chr13	+	42505562	42506915	True	NM_015058,NM_001204504	chr13,chr13	-,+	KIAA0564,DGKH	28369,107256
chr17:1588826-1589220	chr17	+	1588913	1588997	True	NM_001163673,NM_006445	chr17,chr17	+,-	WDR81,PRPF8	30819,-737
chr14:94531834-94532474	chr14	+	94531838	94532466	True	NM_020414,NM_145249	chr14,chr14	-,+	DDX24,IFI27L1	15142,15172
chr6:35314209-35315544	chr6	+	35314216	35315318	True	NM_001171819,NM_006238,NM_003214,NM_001171820,NM_001171818,NM_177435	chr6,chr6,chr6,chr6,chr6,chr6	+,+,-,+,+,+	PPARD,PPARD,TEAD3,PPARD,PPARD,PPARD	-3932,-3932,149593,-3932,-3932,-3932
chr2:71207417-71207631	chr2	+	71207463	71207617	True	NM_144582,NM_024933,NM_001115116	chr2,chr2,chr2	-,+,+	TEX261,ANKRD53,ANKRD53	14438,-1940,-1940
chr1:151765225-151766562	chr1	+	151765384	151766229	True	NM_016178,NM_006862,NM_001083963,NM_001083965,NM_001083964	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	OAZ3,TDRKH,TDRKH,TDRKH,TDRKH	-26309,-2374,-2374,-2374,-2374
chr20:56195326-56195539	chr20	+	56195360	56195588	True	NM_030776,NM_001160417,NM_001160419,NM_001160418,NM_002591	chr20,chr20,chr20,chr20,chr20	-,-,-,-,+	ZBP1,ZBP1,ZBP1,ZBP1,PCK1	94,94,94,94,-59274
chr1:178995427-178995630	chr1	+	178995448	178995528	True	NM_014864,NM_001136000	chr1,chr1	+,-	FAM20B,ABL2	-425,116746
chr11:235364-235926	chr11	+	235505	235975	True	NM_002817,NM_175932,NM_001017524,NM_012239	chr11,chr11,chr11,chr11	+,+,-,-	PSMD13,PSMD13,SIRT3,SIRT3	832,832,437,437
chr8:21911502-21912014	chr8	+	21911525	21911955	True	NM_001978,NM_024815,NM_001114135,NM_001114137,NM_001114136,NM_001114139,NM_001114138	chr8,chr8,chr8,chr8,chr8,chr8,chr8	+,-,+,+,+,+,+	EPB49,NUDT18,EPB49,EPB49,EPB49,EPB49,EPB49	4730,55027,3420,-495,372,372,4730
chr16:687505-689121	chr16	+	687540	689022	True	NM_001040165,NM_138418,NM_001040161,NM_001040162,NM_053284,NM_001040160,NM_032366	chr16,chr16,chr16,chr16,chr16,chr16,chr16	-,+,-,-,+,-,-	C16orf13,FAM195A,C16orf13,C16orf13,WFIKKN1,C16orf13,C16orf13	-1193,2826,-1193,-1193,-6579,-1193,-1193
chr12:56751751-56752323	chr12	+	56751768	56752009	True	NM_198332,NM_005419,NM_016584,NM_001638	chr12,chr12,chr12,chr12	-,-,+,-	STAT2,STAT2,IL23A,APOF	2093,2093,-19165,4639
chr1:32825004-32826633	chr1	+	32825398	32826561	True	NM_052841,NM_001167676	chr1,chr1	+,-	TSSK3,LOC100128071	1300,1333
chr16:67918906-67919289	chr16	+	67918984	67919274	True	NM_006742,NM_025082,NM_198443	chr16,chr16,chr16	+,-,+	PSKH1,CENPT,NRN1L	7900,-37623,-254
chrX:101394606-101395979	chrX	+	101394725	101395587	True	NM_001006938,NM_080390	chrX,chrX	-,+	TCEAL6,TCEAL2	1851,-14117
chr16:1289829-1290835	chr16	+	1289947	1290089	True	NM_024164,NM_003294	chr16,chr16	-,+	TPSB2,TPSAB1	-9762,588
chr16:1289829-1290835	chr16	-	1280803	1280853	False	NM_012467,NM_024164,NM_003294	chr16,chr16,chr16	-,-,+	TPSG1,TPSB2,TPSAB1	-5549,-618,9824
chr2:52798671-52798925	chr2	+	52798684	52798836	True	NM_001201965,NM_001008708	chr2,chr2	-,+	ASB3,CHAC2	1215199,1196092
chr19:17529001-17529292	chr19	+	17529098	17529158	True	NM_004335,NM_138401	chr19,chr19	-,+	BST2,FAM125A	-12714,1753
chr2:8819514-8821197	chr2	+	8819742	8821100	True	NM_020738,NM_002166	chr2,chr2	-,+	KIDINS220,ID2	156705,1012
chr3:50302172-50302854	chr3	+	50302234	50302764	True	NM_006764,NM_004636,NM_001005914	chr3,chr3,chr3	-,+,+	IFRD2,SEMA3B,SEMA3B	27312,2275,2275
chr11:2018760-2019088	chr11	+	2018815	2018983	True	NR_002196,NR_024471,NR_030533,NM_021134	chr11,chr11,chr11,chr11	-,-,-,+	H19,LOC100133545,MIR675,MRPL23	132,-7665,-754,-50364
chr1:27319530-27319741	chr1	+	27319575	27319639	True	NM_052943,NM_001013642	chr1,chr1	-,+	FAM46B,TRNP1	19744,555
chr17:28902889-28903539	chr17	+	28903110	28903536	True	NM_206832,NR_015341	chr17,chr17	-,+	TMIGD1,LRRC37BP1	-242045,-6
chr17:28902889-28903539	chr17	+	16796794	16796857	False	NR_026810,NR_029392	chr17,chr17	+,-	FAM106C,KRT16P2	-104801,-60647
chr21:45528890-45529448	chr21	+	45528895	45529195	True	NM_005049,NM_015259	chr21,chr21	+,-	PWP2,ICOSLG	-1738,131689
chr10:75493249-75494277	chr10	+	75493253	75493754	True	NR_026592,NM_004922	chr10,chr10	-,+	BMS1P4,SEC24C	-2981,10376
chr20:2842738-2843370	chr20	+	2842907	2843347	True	NM_002836,NM_022760	chr20,chr20	+,-	PTPRA,FAM113A	1493,-21575
chr11:88050293-88052069	chr11	+	88050651	88051747	True	NM_000372,NM_001814	chr11,chr11	+,-	TYR,CTSC	859292,19244
chr15:30824705-30826572	chr15	+	30825037	30826629	True	NM_148911,NR_026858	chr15,chr15	-,+	CHRFAM7A,FAM7A1	-139173,38128
chr15:30824705-30826572	chr15	+	23247049	23247106	False	NR_024074,NR_003521	chr15,chr15	+,-	GOLGA8IP,WHAMML1	8135,-38692
chr15:30824705-30826572	chr15	-	30724014	30725268	False	NM_148911,NR_026858	chr15,chr15	-,+	CHRFAM7A,FAM7A1	-38150,139489
chr15:30824705-30826572	chr15	+	32867402	32868076	False	NM_199357,NR_036650	chr15,chr15	+,-	ARHGAP11A,LOC100288615	39614,-41460
chr15:30824705-30826572	chr15	-	32765395	32766649	False	NR_027470,NM_199357	chr15,chr15	-,+	FAM7A2,ARHGAP11A	-38145,141041
chr4:171011791-171012343	chr4	+	171011905	171012190	True	NM_016228,NM_182662,NM_173872	chr4,chr4,chr4	-,-,+	AADAT,AADAT,CLCN3	-722,-533,-470240
chr10:99209921-99211462	chr10	+	99209973	99211272	True	NM_016046,NM_032327,NM_198043,NM_198045,NM_198044,NM_198046	chr10,chr10,chr10,chr10,chr10,chr10	-,+,+,+,+,+	EXOSC1,ZDHHC16,ZDHHC16,ZDHHC16,ZDHHC16,ZDHHC16	-4205,-4094,-4094,-4094,-4094,-4077
chr11:1244373-1244830	chr11	+	1244372	1244522	True	NM_019009,NM_002458	chr11,chr11	-,+	TOLLIP,MUC5B	86420,-128
chr1:91864474-91866128	chr1	+	91864696	91865956	True	NM_001134419,NM_001017975	chr1,chr1	+,-	CDC7,HFM1	100447,4520
chr9:115911463-115912029	chr9	+	115911497	115912020	True	NM_001860,NR_024376	chr9,chr9	+,-	SLC31A2,NCRNA00256B	1217,-37540
chr2:88991577-88991891	chr2	+	88991605	88991932	True	NM_144563,NM_004836	chr2,chr2	+,-	RPIA,EIF2AK3	-480,-64511
chr14:78170873-78171477	chr14	+	78170897	78171459	True	NM_031210,NM_006020	chr14,chr14	+,-	C14orf156,ALKBH1	2965,2947
chr5:42419793-42420557	chr5	+	42419920	42420546	True	NM_001085486,NM_000163	chr5,chr5	-,+	SEPP1,GHR	391528,3479
chr3:128208112-128208390	chr3	+	128208207	128208425	True	NM_001145662,NM_001145661,NR_026954,NM_032638	chr3,chr3,chr3,chr3	-,-,+,-	GATA2,GATA2,LOC90246,GATA2	-1443,-834,18252,3655
chr12:3602289-3602654	chr12	+	3602309	3602703	True	NM_019854,NM_001144958	chr12,chr12	+,-	PRMT8,EFCAB4B	-1935,259713
chrX:151083995-151084313	chrX	+	151084037	151084219	True	NR_029973,NM_002362,NM_001011548,NM_001011549,NM_001011550	chrX,chrX,chrX,chrX,chrX	-,+,+,+,+	MIR452,MAGEA4,MAGEA4,MAGEA4,MAGEA4	44015,489,-2727,1177,2540
chrX:151083995-151084313	chrX	+	151086081	151086832	False	NR_029973,NM_002362,NM_001011548,NM_001011549,NM_001011550	chrX,chrX,chrX,chrX,chrX	-,+,+,+,+	MIR452,MAGEA4,MAGEA4,MAGEA4,MAGEA4	41402,-1423,-4771,-735,-47
chr6:161086600-161086987	chr6	+	161086663	161086951	True	NM_001168338,NM_005577	chr6,chr6	+,-	PLG,LPA	36273,506
chr9:133540684-133541164	chr9	+	133540783	133541151	True	NR_027440,NM_021619	chr9,chr9	-,+	LOC100272217,PRDM12	-85902,-861
chr7:40174876-40175754	chr7	+	40175001	40175592	True	NM_024728,NM_001193311,NM_001193312,NM_001193313,NM_138701	chr7,chr7,chr7,chr7,chr7	+,+,+,+,-	C7orf10,C7orf10,C7orf10,C7orf10,C7orf11	-477,-477,-477,-477,-750
chr9:130702056-130702407	chr9	+	130702075	130702387	True	NM_001135219,NM_003863,NM_001006641	chr9,chr9,chr9	-,-,+	PIP5KL1,DPM2,SLC25A25	-8999,-1312,128091
chr10:43634183-43634385	chr10	+	43634184	43634409	True	NM_018590,NM_145313	chr10,chr10	+,-	CSGALNACT2,RASGEF1A	-301,128008
chr12:7593027-7593381	chr12	+	7593105	7593176	True	NM_174941,NM_001080454	chr12,chr12	-,+	CD163L1,ACSM4	3626,-136232
chr6:160326389-160326604	chr6	+	160326390	160326582	True	NM_002377,NM_030752	chr6,chr6	+,-	MAS1,TCP1	1391,-115655
chr18:68096408-68096751	chr18	+	68096513	68096721	True	NM_173630,NM_004232	chr18,chr18	-,+	RTTN,SOCS6	-223551,-140427
chr19:52691668-52692546	chr19	+	52691848	52692462	True	NM_001102657,NR_033500,NM_014225	chr19,chr19,chr19	-,+,+	ZNF836,PPP2R1A,PPP2R1A	-16952,592,592
chr12:75602406-75603117	chr12	+	75602452	75603146	True	NM_153748,NM_152779,NM_139136,NM_139137	chr12,chr12,chr12,chr12	-,+,-,-	KCNC2,GLIPR1L1,KCNC2,KCNC2	415,125316,415,415
chr4:185655496-185656556	chr4	+	185655582	185656385	True	NM_152683,NM_024629	chr4,chr4	+,-	CCDC111,MLF1IP	-84866,-296
chr19:2426037-2426321	chr19	+	2426049	2426303	True	NM_182973,NM_012458	chr19,chr19	+,-	TMPRSS9,TIMM13	-36316,1622
chr8:11839136-11840756	chr8	+	11839259	11840589	True	NM_001033017,NM_001033018	chr8,chr8	+,-	DEFB135,DEFB136	-76,-7151
chr2:26779667-26779934	chr2	+	26779674	26779840	True	NM_001105519,NM_194248	chr2,chr2	+,-	C2orf70,OTOF	5640,1776
chr1:1198453-1199227	chr1	+	1198462	1199051	True	NM_058167,NM_001130413	chr1,chr1	-,+	UBE2J2,SCNN1D	10240,11586
chr19:10222039-10222708	chr19	+	10222157	10222443	True	NM_002566,NM_031917,NM_003755,NM_001198690,NR_003688,NR_004381,NM_001040664,NM_020230	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,-,+,+,+,+,+	P2RY11,ANGPTL6,EIF3G,PPAN-P2RY11,SNORD105B,SNORD105,PPAN-P2RY11,PPAN	-11,-8732,8206,-5309,-1783,-3881,-5309,-5309
chr18:51902727-51903613	chr18	+	51903028	51903368	True	NM_173529,NM_139171	chr18,chr18	+,-	C18orf54,STARD6	-17914,-22085
chr13:111264806-111266416	chr13	+	111265168	111265882	True	NM_017817,NM_018210	chr13,chr13	-,+	RAB20,CARKD	-51097,2125
chr12:122657719-122658309	chr12	+	122657736	122658351	True	NM_001014336,NM_152759,NM_001098519	chr12,chr12,chr12	-,+,+	IL31,LRRC43,LRRC43	445,-5522,9315
chr16:3507048-3507490	chr16	+	3507093	3507535	True	NM_001083600,NM_024845,NM_152457	chr16,chr16,chr16	+,+,-	NAT15,NAT15,ZNF597	456,456,-13603
chr16:81108964-81110609	chr16	+	81109216	81110512	True	NM_152337,NM_015251,NM_001100873	chr16,chr16,chr16	-,+,-	C16orf46,ATMIN,C16orf46	410,-39817,410
chrX:43736650-43737345	chrX	+	43736735	43737379	True	NM_000898,NM_000240	chrX,chrX	-,+	MAOB,MAOA	4394,-221390
chrX:138285400-138285618	chrX	+	138285556	138285628	True	NR_028597,NM_001139501,NM_001139500,NM_001139498	chrX,chrX,chrX,chrX	+,-,-,-	SRD5A1P1,FGF13,FGF13,FGF13	243349,1607,1607,1607
chrX:135393779-135394062	chrX	+	135393784	135394004	True	NM_001173516,NM_153834	chrX,chrX	-,+	MAP7D3,GPR112	-55143,-10721
chrY:10032837-10033126	chrY	+	10032854	10033114	True	NR_003593,NR_003589	chrY,chrY	+,-	TTTY23B,TTTY1B	-284498,-420926
chr3:133292228-133292531	chr3	+	133292290	133292574	True	NM_017548,NM_001134422,NM_001134423,NM_007027	chr3,chr3,chr3,chr3	+,+,+,-	CDV3,CDV3,CDV3,TOPBP1	-13,-13,726,88213
chr20:16552433-16553751	chr20	+	16552931	16553680	True	NM_001199865,NM_001199866,NM_024704,NM_003092	chr20,chr20,chr20,chr20	-,-,-,+	KIF16B,KIF16B,KIF16B,SNRPB2	453,453,453,156928
chr8:131412548-131412959	chr8	+	131412547	131412741	True	NM_015137,NM_018482	chr8,chr8	+,-	EFR3A,ASAP1	1503614,1534
chr4:188892963-188893200	chr4	+	188892978	188893041	True	NM_173553,NM_174900	chr4,chr4	-,+	TRIML2,ZFP42	133420,23883
chr1:165537805-165539488	chr1	+	165538081	165539381	True	NR_026744,NM_001005214	chr1,chr1	-,+	LOC400794,LRRC52	12010,-24654
chr7:102104460-102105074	chr7	+	102104583	102104933	True	NM_017621,NM_152892	chr7,chr7	-,+	ALKBH4,LRWD1	438,456
chr7:55434268-55435137	chr7	+	55434408	55435103	True	NM_018697,NM_030796	chr7,chr7	+,-	LANCL2,VOPP1	-1318,205154
chr11:577262-577479	chr11	+	577322	577533	True	NR_029623,NM_020901,NR_026967	chr11,chr11,chr11	-,+,-	MIR210,PHRF1,LOC143666	-9124,-891,-1437
chr11:808554-808975	chr11	+	808702	808945	True	NM_001004,NM_145887,NR_002585,NM_145886,NM_020376	chr11,chr11,chr11,chr11,chr11	+,-,+,-,+	RPLP2,LRDD,SNORA52,LRDD,PNPLA2	990,-3452,2735,-3452,9955
chr1:45267778-45268737	chr1	+	45267793	45268717	True	NM_001013632,NM_004073,NM_001136537	chr1,chr1,chr1	-,+,+	TCTEX1D4,PLK3,BTBD19	4290,-1808,5436
chr6:14784371-14785070	chr6	+	14784601	14785111	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	461415,878228
chr3:32861362-32861590	chr3	+	32861370	32861610	True	NM_016141,NM_001039111	chr3,chr3	-,+	DYNC1LI1,TRIM71	-249004,-1911
chr3:88365938-88366805	chr3	+	88366004	88366814	True	NM_173824,NM_001195308	chr3,chr3	+,-	C3orf38,CGGBP1	-167173,-166988
chr15:48937091-48937317	chr15	+	48937220	48937308	True	NM_014335,NM_000138	chr15,chr15	+,-	EID1,FBN1	232981,727
chr1:161172204-161172950	chr1	+	161172271	161172800	True	NM_004550,NM_005099,NM_001166159	chr1,chr1,chr1	+,-,+	NDUFS2,ADAMTS4,NDUFS2	-3217,-3426,-385
chr15:25466123-25466535	chr15	+	25466143	25466503	True	NR_003315,NR_003303,NR_003495,NR_003496,NR_003497,NR_003346,NR_022010,NR_003344,NR_003345,NR_003351,NR_003347,NM_130838,NR_003342,NR_003343,NR_003358,NR_003348	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,+,+,-,+,+,+,+	SNORD115-23,SNORD115-11,SNORD115-24,HBII-52-27,HBII-52-28,SNORD115-31,PAR4,SNORD115-29,SNORD115-30,SNORD115-36,SNORD115-32,UBE3A,SNORD115-25,SNORD115-26,SNORD115-43,SNORD115-33	-9251,1889,-7388,-544,997,5752,-9355,1889,3846,1889,7610,184200,-5506,-2430,1889,9481
chr7:99773974-99774501	chr7	+	99773991	99774541	True	NM_024637,NM_152742,NM_012447	chr7,chr7,chr7	-,-,+	GAL3ST4,GPC2,STAG3	-7618,499,996
chr1:183604344-183604558	chr1	+	183604349	183604553	True	NM_015149,NM_005717	chr1,chr1	+,-	RGL1,ARPC5	654,482
chr20:34360293-34362095	chr20	+	34360662	34361890	True	NM_184234,NM_016436	chr20,chr20	-,+	RBM39,PHF20	-30469,-790
chr1:206135022-206135560	chr1	+	206135067	206135459	True	NM_001123168,NM_001007544	chr1,chr1	+,-	FAM72A,C1orf186	3451,153238
chr1:206135022-206135560	chr1	+	120835584	120835976	False	NM_001004340,NM_001100910	chr1,chr1	-,+	FCGR1B,FAM72B	100018,3028
chr1:206135022-206135560	chr1	-	143916141	143916533	False	NM_207418,NR_034178	chr1,chr1	-,+	FAM72D,SRGAP2P2	-2998,-444
chr17:17482914-17484155	chr17	+	17483037	17484122	True	NM_007169,NM_030665,NM_148173	chr17,chr17,chr17	-,+,-	PEMT,RAI1,PEMT	1673,100664,-2258
chr17:74706051-74706318	chr17	+	74706063	74706304	True	NM_001008528,NM_001008529,NM_001080510,NM_198530	chr17,chr17,chr17,chr17	-,-,+,-	MXRA7,MXRA7,METTL23,MXRA7	803,803,16645,803
chr11:6733524-6734658	chr11	+	6733867	6734270	True	NM_001004489,NR_003945	chr11,chr11	+,-	OR2AG1,GVINP1	71977,8891
chr7:130081156-130081612	chr7	+	130081156	130081653	True	NM_177524,NM_018718	chr7,chr7	+,-	MEST,TSGA14	44392,-302
chr1:48693492-48694591	chr1	+	48693496	48694638	True	NR_026749,NM_001011547,NM_001135181	chr1,chr1,chr1	-,+,+	SKINTL,SLC5A9,SLC5A9	-45396,-5190,-5190
chr5:16934549-16935554	chr5	+	16934560	16935406	True	NM_012334,NM_006317	chr5,chr5	-,+	MYO10,BASP1	1029,282343
chr14:73491268-73491867	chr14	+	73491274	73491586	True	NM_021239,NM_021260	chr14,chr14	+,-	RBM25,ZFYVE1	33634,2384
chr20:3762942-3763174	chr20	+	3763083	3763217	True	NM_001810,NM_015417,NM_004358	chr20,chr20,chr20	-,-,+	CENPB,SPEF1,CDC25B	4170,-981,13183
chr7:142552209-142552607	chr7	+	142552270	142552524	True	NM_004445,NM_018646	chr7,chr7	+,-	EPHB6,TRPV6	267,31003
chr19:14492320-14492541	chr19	+	14492319	14492511	True	NM_078481,NM_001025160,NM_001204057,NM_001784	chr19,chr19,chr19,chr19	+,+,-,+	CD97,CD97,DDX39A,CD97	-157,-157,37445,-157
chr15:77923220-77923453	chr15	+	77923273	77923379	True	NM_018200,NM_032808	chr15,chr15	+,-	HMG20A,LINGO1	-210081,1380
chr12:57701500-57702132	chr12	+	57701606	57702185	True	NM_014925,NM_001166357	chr12,chr12	-,+	R3HDM2,SHMT2	2116,-77521
chr11:70509207-70509421	chr11	+	70509264	70509336	True	NM_133266,NM_138565	chr11,chr11	-,+	SHANK2,CTTN	-1341,-264703
chr7:140838706-140839859	chr7	+	140838978	140839908	True	NM_053035,NM_001195278	chr7,chr7	-,+	MRPS33,LOC100131199	-124197,-65011
chr22:24302805-24303393	chr22	+	24302871	24303239	True	NM_000854,NM_001080843,NM_001084393	chr22,chr22,chr22	-,-,+	GSTT2,GSTT2B,DDTL	204,179,5786
chr22:24302805-24303393	chr22	-	24322467	24322835	False	NM_001355,NM_000854,NM_001084392	chr22,chr22,chr22	-,+,-	DDT,GSTT2,DDT	-448,-204,-5787
chr20:20031247-20031665	chr20	+	20031343	20031654	True	NM_001167816,NM_015585,NM_016652	chr20,chr20,chr20	+,+,-	C20orf26,C20orf26,CRNKL1	5635,1503,5097
chr3:97491556-97492424	chr3	+	97491788	97492204	True	NM_032146,NM_001042533,NM_177976	chr3,chr3,chr3	+,-,+	ARL6,MINA,ARL6	-8251,199070,-8251
chr17:58597438-58597653	chr17	+	58597463	58597594	True	NM_006380,NM_003620	chr17,chr17	-,+	APPBP2,PPM1D	6041,79949
chr1:247276354-247276628	chr1	+	247276379	247276669	True	NM_024804,NM_001142572,NM_207401,NM_173858	chr1,chr1,chr1,chr1	-,-,-,+	ZNF669,ZNF669,C1orf229,VN1R5	-8705,-8705,-660,142704
chr15:27007138-27009012	chr15	+	27007482	27008565	True	NM_000814,NM_000810	chr15,chr15	-,+	GABRB3,GABRA5	9717,103300
chr13:99853502-99854045	chr13	+	99853612	99853952	True	NM_001144072,NR_026644,NR_036531,NM_177967,NR_036532	chr13,chr13,chr13,chr13,chr13	+,+,-,+,-	UBAC2,UBAC2,LOC100289373,UBAC2,LOC100289373	-984,-500,-601,-500,-603
chr6:3896553-3898181	chr6	+	3896930	3898077	True	NM_183373,NM_012135	chr6,chr6	-,+	C6orf145,FAM50B	-144684,-47362
chr1:35325711-35326116	chr1	+	35325710	35326140	True	NM_001164824,NM_001164825,NM_138428,NM_002060	chr1,chr1,chr1,chr1	-,-,-,+	C1orf212,C1orf212,C1orf212,GJA4	-1064,-372,-293,-67162
chr10:96830310-96831087	chr10	+	96830357	96831124	True	NM_000770,NM_001198855,NM_207321,NM_001198854,NM_001198853	chr10,chr10,chr10,chr10,chr10	-,-,+,-,-	CYP2C8,CYP2C8,C10orf129,CYP2C8,CYP2C8	-1103,-1103,122832,-1103,-1103
chr20:35803025-35803915	chr20	+	35803193	35803473	True	NM_152503,NM_001135771,NM_213632,NM_002951,NM_213631	chr20,chr20,chr20,chr20,chr20	-,+,-,+,-	C20orf132,RPN2,C20orf132,RPN2,C20orf132	4565,3982,4565,3982,4565
chr8:120218352-120218714	chr8	+	120218374	120218551	True	NM_052886,NM_002546	chr8,chr8	+,-	MAL2,TNFRSF11B	2058,-253991
chr1:119963231-119964506	chr1	+	119963243	119964444	True	NM_000198,NR_036540,NM_001166120	chr1,chr1,chr1	+,-,+	HSD3B2,LOC644242,HSD3B2	-5558,177520,-5747
chr6:27336932-27338653	chr6	+	27336938	27338398	True	NM_001076781,NR_024553,NR_002722	chr6,chr6,chr6	+,-,-	ZNF391,ZNF204P,ZNF204P	18125,4805,956
chr4:11373771-11374449	chr4	+	11373774	11374314	True	NR_030298,NM_005114	chr4,chr4	+,-	MIR572,HS3ST1	-3374,56273
chr10:69996199-69997690	chr10	+	69996399	69997490	True	NM_145178,NM_012207	chr10,chr10	-,+	ATOH7,HNRNPH3	-4544,94277
chr15:74467470-74467805	chr15	+	74467488	74467822	True	NM_001199042,NM_201526,NM_005545	chr15,chr15,chr15	-,+,+	STRA6,ISLR,ISLR	27448,-634,-1452
chr2:107115535-107116829	chr2	+	107115572	107116631	True	NM_001144013,NR_003506	chr2,chr2	-,+	RGPD3,PLGLA	-30771,-112854
chr2:107115535-107116829	chr2	-	87076200	87077260	False	NR_037931,NM_001178100	chr2,chr2	+,-	LOC100286979,CD8B	11687,11837
chr1:41932405-41932937	chr1	+	41932460	41932864	True	NM_001956,NR_037868	chr1,chr1	-,+	EDN2,LOC100507178	17530,-452249
chr12:21926888-21927457	chr12	+	21926895	21927416	True	NM_030572,NM_004982	chr12,chr12	+,-	C12orf39,KCNJ8	-247692,381
chr12:6516119-6517240	chr12	+	6516341	6516907	True	NM_002342,NM_001159575	chr12,chr12	+,-	LTBR,SCNN1A	-23035,-29818
chr5:63456551-63457596	chr5	+	63456555	63457595	True	NM_000524,NM_178532,NM_001113561	chr5,chr5,chr5	-,+,+	HTR1A,RNF180,RNF180	-199009,4075,4075
chr1:112283485-112285128	chr1	+	112283760	112284933	True	NM_019099,NM_007204	chr1,chr1	-,+	C1orf183,DDX20	-1714,13256
chr1:46708809-46709291	chr1	+	46708851	46709124	True	NM_003579,NM_001142548,NR_024332	chr1,chr1,chr1	+,+,-	RAD54L,RAD54L,POMGNT1	4242,4242,-22874
chr10:104152270-104153182	chr10	+	104152293	104152989	True	NM_001077493,NM_002502,NM_002779,NM_001077494	chr10,chr10,chr10,chr10	+,+,-,+	NFKB2,NFKB2,PSD,NFKB2	1239,2442,25962,1349
chr20:46028624-46030156	chr20	+	46029106	46029848	True	NM_183048,NR_024594	chr20,chr20	-,+	ZMYND8,LOC100131496	-43632,-81924
chr12:49209670-49211182	chr12	+	49210008	49211126	True	NM_000725,NM_020983	chr12,chr12	+,-	CACNB3,ADCY6	1385,-27188
chr16:28227774-28229162	chr16	+	28227778	28228769	True	NM_015171,NM_001024401	chr16,chr16	-,+	XPO6,SBK1	-4588,75070
chr8:107283126-107283483	chr8	+	107283181	107283529	True	NM_018002,NM_139166,NM_001198533	chr8,chr8,chr8	+,-,+	OXR1,ABRA,OXR1	-826,498993,-826
chrX:100484701-100485482	chrX	+	100484736	100485170	True	NM_001171184,NM_001939,NM_001168474	chrX,chrX,chrX	+,+,-	DRP2,DRP2,TAF7L	-9863,-9863,61205
chr20:3716406-3718280	chr20	+	3716431	3718253	True	NM_052970,NM_001197327,NM_001039140,NM_023068	chr20,chr20,chr20,chr20	+,+,-,-	HSPA12B,HSPA12B,C20orf27,SIGLEC1	-3165,-3165,30251,-28656
chr14:70085864-70086744	chr14	+	70085879	70086783	True	NR_024630,NM_014734	chr14,chr14	-,+	C14orf162,KIAA0247	-47961,-7621
chr1:15737938-15738249	chr1	+	15737953	15738277	True	NM_024329,NM_001229	chr1,chr1	+,-	EFHD2,CASP9	-1613,112713
chr17:21902175-21902556	chr17	+	21902297	21902597	True	NM_001113434,NR_027084	chr17,chr17	-,+	C17orf51,FLJ36000	-447356,1464
chr17:21902175-21902556	chr17	+	21905011	21905311	False	NM_001113434,NR_027084	chr17,chr17	-,+	C17orf51,FLJ36000	-450070,-1000
chr17:21902175-21902556	chr17	+	21907385	21907685	False	NM_001113434,NR_027084	chr17,chr17	-,+	C17orf51,FLJ36000	-452444,-3374
chr1:114478796-114479177	chr1	+	114478877	114479098	True	NM_152696,NM_198268,NM_006594	chr1,chr1,chr1	+,+,-	HIPK1,HIPK1,AP4B1	-6936,-6936,-31136
chr6:14912683-14913966	chr6	+	14912884	14913997	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	332529,749343
chr8:10508958-10510247	chr8	+	10509319	10510237	True	NM_001040032,NM_178857	chr8,chr8	+,-	C8orf74,RP1L1	19909,2430
chrX:151867721-151868569	chrX	+	151867726	151868578	True	NM_001129826,NM_005363,NM_001129828,NM_175868,NM_004909,NM_001080848	chrX,chrX,chrX,chrX,chrX,chrX	-,+,-,+,-,-	CSAG3,MAGEA6,CSAG3,MAGEA6,CSAG2,CSAG2	9142,-532,9219,-532,9219,9219
chrX:151867721-151868569	chrX	-	151936898	151937750	False	NM_001129826,NM_001129828,NM_005362,NM_004909,NM_001080848	chrX,chrX,chrX,chrX,chrX	+,+,-,+,+	CSAG3,CSAG3,MAGEA3,CSAG2,CSAG2	-9138,-9215,540,-9215,-9215
chr17:14203255-14203709	chr17	+	14203295	14203741	True	NR_026880,NM_006041,NM_001007530	chr17,chr17,chr17	+,+,-	MGC12916,HS3ST3B1,CDRT15	3315,764,-63145
chr20:62694330-62694533	chr20	+	62694350	62694516	True	NM_198723,NM_018419,NM_003195	chr20,chr20,chr20	+,-,+	TCEA2,SOX18,TCEA2	-5962,-13371,-391
chr5:139925839-139926651	chr5	+	139926049	139926486	True	NM_001035235,NM_003732	chr5,chr5	-,+	SRA1,EIF4EBP3	11242,764
chr1:165513464-165513697	chr1	+	165513499	165513745	True	NM_001005214,NR_026744	chr1,chr1	+,-	LRRC52,LOC400794	-72,37646
chr20:60983304-60983936	chr20	+	60983303	60983871	True	NM_001024,NM_031215	chr20,chr20	+,-	RPS21,CABLES2	-21233,-964
chr17:40950531-40950822	chr17	+	40950584	40950786	True	NM_173478,NM_001040431	chr17,chr17	+,-	CNTD1,CCDC56	67,-32
chr11:120108803-120110633	chr11	+	120109204	120110559	True	NM_014352,NM_012101	chr11,chr11	+,-	POU2F3,TRIM29	391,-100341
chr17:37823472-37823725	chr17	+	37823499	37823653	True	NM_002686,NM_003673,NM_033419	chr17,chr17,chr17	+,+,-	PNMT,TCAP,PGAP3	853,-1951,20707
chr4:26323448-26323720	chr4	+	26323455	26323664	True	NM_203284,NM_015874,NM_203283,NM_005349,NM_000730	chr4,chr4,chr4,chr4,chr4	+,+,+,+,-	RBPJ,RBPJ,RBPJ,RBPJ,CCKAR	-1058,-1058,-2174,-2174,168428
chr1:153365431-153367184	chr1	+	153365547	153366895	True	NM_176823,NM_002964	chr1,chr1	+,-	S100A7A,S100A8	22104,-1883
chr3:45188082-45188301	chr3	+	45188086	45188338	True	NM_022842,NM_178181,NM_003278	chr3,chr3,chr3	-,-,+	CDCP1,CDCP1,CLEC3B	-172,-172,-120378
chr22:29952829-29953872	chr22	+	29953722	29953898	True	NM_181825,NM_001002877,NM_001002878,NM_003678,NM_001002879	chr22,chr22,chr22,chr22,chr22	+,-,-,-,-	NF2,THOC5,THOC5,THOC5,THOC5	45646,-3986,-4078,-3986,-4078
chr21:39504629-39505227	chr21	+	39504684	39505184	True	NM_005867,NR_026842	chr21,chr21	-,+	DSCR4,DSCR8	-11230,-11194
chr7:74378600-74378930	chr7	+	74378835	74378953	True	NM_001025202,NM_001145063	chr7,chr7	-,+	STAG3L2,GATSL1	-72104,129
chr4:103790987-103791301	chr4	+	103791026	103791342	True	NM_001008388,NM_181890,NM_181893	chr4,chr4,chr4	+,-,-	CISD2,UBE2D3,UBE2D3	-949,-994,-1023
chr1:102424615-102425917	chr1	+	102424664	102425910	True	NR_033424,NM_058170	chr1,chr1	+,-	DNAJA1P5,OLFM3	-87149,36930
chr2:220144986-220145187	chr2	+	220145062	220145170	True	NM_001039550,NR_029688,NM_006736	chr2,chr2,chr2	+,-,+	DNAJB2,MIR153-1,DNAJB2	-1073,13802,-1073
chr12:116971146-116971573	chr12	+	116971390	116971520	True	NR_027346,NR_027345,NM_024738	chr12,chr12,chr12	+,+,-	NCRNA00173,NCRNA00173,C12orf49	-205,-218,204373
chr16:12012115-12012857	chr16	+	12012115	12012904	True	NM_001192,NM_002094,NM_001130007,NM_001130006	chr16,chr16,chr16,chr16	+,-,-,-	TNFRSF17,GSPT1,GSPT1,GSPT1	46059,-2290,-1596,-2290
chr5:172097242-172097500	chr5	+	172097280	172097529	True	NM_001142651,NM_004417	chr5,chr5	+,-	NEURL1B,DUSP1	-29055,100724
chr11:67231616-67232123	chr11	+	67231696	67232117	True	NM_001078651,NM_001078650,NM_025124,NM_145200	chr11,chr11,chr11,chr11	-,-,-,+	TMEM134,TMEM134,TMEM134,CABP4	4664,4664,4664,-8929
chr19:51469672-51471038	chr19	+	51469716	51471082	True	NM_005551,NM_002774,NM_001012965,NM_001012964	chr19,chr19,chr19,chr19	+,-,-,-	KLK2,KLK6,KLK6,KLK6	-93078,1897,1015,1015
chr9:77567208-77567411	chr9	+	77567226	77567400	True	NM_012383,NM_017998	chr9,chr9	+,-	OSTF1,C9orf40	135997,452
chr5:96271010-96271470	chr5	+	96271083	96271485	True	NM_001198541,NM_005575	chr5,chr5	-,+	ERAP1,LNPEP	-121235,8
chr2:160750312-160751261	chr2	+	160750463	160751221	True	NM_001198759,NM_022826	chr2,chr2	-,+	LY75-CD302,MARCH7	10096,-181504
chr16:24545568-24546558	chr16	+	24545618	24546075	True	NM_032626,NM_001006634,NM_018703,NM_006910	chr16,chr16,chr16,chr16	+,-,+,+	RBBP6,ARHGAP17,RBBP6,RBBP6	4832,480651,4832,4832
chr19:41725238-41725615	chr19	+	41725260	41725554	True	NM_001699,NM_000660,NM_021913	chr19,chr19,chr19	+,-,+	AXL,TGFB1,AXL	-203,134327,-203
chr2:18740989-18741281	chr2	+	18741060	18741305	True	NM_020905,NM_002252	chr2,chr2	-,+	RDH14,KCNS3	704,-681166
chrX:43830133-43831768	chrX	+	43830157	43831736	True	NM_000266,NM_000240	chrX,chrX	-,+	NDP,MAOA	1235,-314799
chr10:88429523-88430345	chr10	+	88429838	88430338	True	NM_001080115,NM_001080114,NM_001080116,NM_001171611,NM_001171610,NM_007078,NM_015045	chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,+,-	LDB3,LDB3,LDB3,LDB3,LDB3,LDB3,WAPAL	-1463,-1463,-1568,-1463,-1683,-1463,-148297
chr16:12018352-12019186	chr16	+	12018471	12018546	True	NM_001192,NM_002094,NM_001130007,NM_001130006	chr16,chr16,chr16,chr16	+,-,-,-	TNFRSF17,GSPT1,GSPT1,GSPT1	40417,-8646,-7952,-8646
chr1:48295198-48296903	chr1	+	48295372	48296904	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	165708,391452
chr3:194989871-194991109	chr3	+	194989897	194990825	True	NR_003265,NM_152531	chr3,chr3	+,-	SDHAP2,C3orf21	394084,1128
chr19:6501884-6502099	chr19	+	6501932	6502000	True	NM_003811,NM_006087	chr19,chr19	+,-	TNFSF9,TUBB4	29009,380
chr19:58182670-58184110	chr19	+	58182713	58183713	True	NM_152677,NM_138347,NM_001085384	chr19,chr19,chr19	+,+,-	ZSCAN4,ZNF551,ZNF154	-2461,9643,36916
chr22:24641700-24642080	chr22	+	24641703	24641853	True	NM_001099782,NM_001099781,NM_004121,NR_003714	chr22,chr22,chr22,chr22	-,-,-,+	GGT5,GGT5,GGT5,POM121L9P	-593,-593,-593,5735
chr7:16396142-16397472	chr7	+	16396157	16397422	True	NM_001195280,NM_001101417	chr7,chr7	+,-	LOC100506049,ISPD	169082,63580
chr15:24413623-24414472	chr15	+	24413841	24414362	True	NR_026646,NR_026647	chr15,chr15	+,-	PWRN1,PWRN2	388941,742
chr22:31031077-31031517	chr22	+	31031084	31031428	True	NM_001001479,NR_036550	chr22,chr22	+,-	SLC35E4,PES1	364,-28084
chrX:73065984-73067348	chrX	+	73066145	73067182	True	NR_001564,NR_003255	chrX,chrX	-,+	XIST,TSIX	5469,-54158
chr17:27055476-27056011	chr17	+	27055487	27055859	True	NM_000984,NR_000014,NM_178170,NR_000010,NR_000013,NM_138463,NM_001160407,NR_000009	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,-,-,+	RPL23A,SNORD42A,NEK8,SNORD4A,SNORD42B,TLCD1,TLCD1,SNORD4B	-8538,-5091,-28,-5938,-7970,-2257,-1538,-4839
chr21:44074996-44075464	chr21	+	44075105	44075461	True	NM_001001585,NM_001001584,NM_001001574,NM_080860,NM_002606,NM_001001578,NM_001001579,NM_001001569,NM_001001568,NM_001001581,NM_001001580,NM_001001583,NM_001001582,NM_001001570,NM_001001571,NM_001001572,NM_001001573,NM_001001567,NM_001001575,NM_001001576,NM_001001577	chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21	+,+,+,-,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+	PDE9A,PDE9A,PDE9A,RSPH1,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A	-1294,-1294,-1294,-158704,-1294,-1294,-1294,-1294,-1294,-1294,-1294,-1294,-1294,-1294,-1294,-1294,-1294,-1294,-1294,-1294,-1294
chr16:69956537-69957086	chr16	+	69956640	69956711	True	NM_199424,NR_003610	chr16,chr16	+,-	WWP2,PDXDC2P	2189,143197
chr4:106066762-106067045	chr4	+	106066764	106066935	True	NM_001127208,NM_006903,NM_017628	chr4,chr4,chr4	+,-,+	TET2,PPA2,TET2	906,328348,96
chr17:8244430-8244934	chr17	+	8244531	8244795	True	NR_024447,NM_153007	chr17,chr17	-,+	LOC100128288,ODF4	19114,-1395
chr8:17584551-17584825	chr8	+	17584639	17584867	True	NM_001001931,NM_006207,NM_001166393	chr8,chr8,chr8	-,+,-	MTUS1,PDGFRL,MTUS1	-4909,-150748,-4555
chr19:45003337-45003539	chr19	+	45003379	45003569	True	NM_001205280,NM_013256	chr19,chr19	+,-	LOC147710,ZNF180	113370,1055
chr17:79342278-79342538	chr17	+	79342492	79342568	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	30971,-38018
chr12:29649786-29650241	chr12	+	29649872	29650281	True	NM_018099,NM_183378	chr12,chr12	+,-	FAR2,OVCH1	-273326,391
chr7:51385829-51386727	chr7	+	51386007	51386673	True	NM_015198,NR_033845	chr7,chr7	-,+	COBL,LOC100129427	-1492,-786602
chr14:93530482-93530864	chr14	+	93530755	93530905	True	NM_001142594,NR_002808	chr14,chr14	-,+	ITPK1,ITPK1-AS1	51408,2891
chr3:193942071-193943231	chr3	+	193942171	193943259	True	NR_024480,NM_005524	chr3,chr3	-,+	LOC100131551,HES1	87384,-88298
chr20:33100146-33101427	chr20	+	33100172	33101300	True	NM_080476,NM_014183	chr20,chr20	-,+	PIGU,DYNLRB1	163839,2903
chr19:38715008-38715331	chr19	+	38715011	38715261	True	NM_001135156,NM_004647,NM_001135155,NM_001166103	chr19,chr19,chr19,chr19	-,-,-,+	DPF1,DPF1,DPF1,SPINT2	5106,-121,-121,39836
chr11:8962014-8963089	chr11	+	8962043	8962967	True	NM_020643,NM_020646,NM_182901	chr11,chr11,chr11	-,-,+	C11orf16,ASCL3,C11orf17	-7490,1671,-29292
chr1:200993230-200994691	chr1	+	200993293	200994612	True	NM_001142569,NM_017596	chr1,chr1	+,-	C1orf106,KIF21B	-129345,-465
chr7:55752794-55753012	chr7	+	55752820	55753032	True	NM_182633,NR_027342,NR_027339,NR_027340	chr7,chr7,chr7,chr7	+,-,-,-	ZNF713,FKBP9L,FKBP9L,FKBP9L	227298,4012,4171,2743
chr7:55752794-55753012	chr7	-	33042283	33042495	False	NM_001166118,NM_007270	chr7,chr7	-,+	NT5C3,FKBP9	38076,-45329
chr10:27755014-27755434	chr10	+	27755013	27755388	True	NM_021252,NM_001034842	chr10,chr10	+,-	RAB18,PTCHD3	37860,-51716
chr7:27702106-27702330	chr7	+	27702147	27702291	True	NM_152740,NM_001079864	chr7,chr7	-,+	HIBADH,TAX1BP1	379,77446
chr22:50625541-50625776	chr22	+	50625684	50625746	True	NM_025204,NM_020461	chr22,chr22	+,-	TRABD,TUBGCP6	-1375,57704
chr15:78934343-78935248	chr15	+	78934438	78935282	True	NM_000745,NM_000750	chr15,chr15	+,-	CHRNA5,CHRNB4	-76627,-851
chr1:50889475-50890151	chr1	+	50889625	50890165	True	NM_021952,NM_032110	chr1,chr1	+,-	ELAVL4,DMRTA2	-315082,-484
chr13:47371435-47372061	chr13	+	47371492	47371758	True	NM_001164213,NM_001984	chr13,chr13	+,-	LRCH1,ESD	-244247,-125
chr14:64970750-64971031	chr14	+	64970869	64971074	True	NM_006977,NM_001123329,NM_014950	chr14,chr14,chr14	-,+,+	ZBTB25,ZBTB1,ZBTB1	-315,217,217
chr19:3134896-3135227	chr19	+	3135047	3135167	True	NM_198969,NM_002068	chr19,chr19	-,+	AES,GNA15	-72083,1023
chr8:145636498-145637088	chr8	+	145636521	145636851	True	NM_130849,NM_017767,NM_174922,NM_013291	chr8,chr8,chr8,chr8	-,-,+,-	SLC39A4,SLC39A4,ADCK5,CPSF1	5472,5116,-38841,-1788
chr14:21735892-21737310	chr14	+	21735893	21737160	True	NM_001077443,NM_001077442,NM_020366,NM_004500,NM_031314	chr14,chr14,chr14,chr14,chr14	-,-,+,-,-	HNRNPC,HNRNPC,RPGRIP1,HNRNPC,HNRNPC	535,535,18975,535,535
chr3:187869145-187869791	chr3	+	187869272	187869577	True	NR_036497,NM_001167672	chr3,chr3	-,+	LOC339929,LPP	2360,2085
chr5:725524-727296	chr5	+	725575	727192	True	NM_018140,NM_007030	chr5,chr5	+,-	CEP72,TPPP	-113228,-32065
chr5:725524-727296	chr5	+	809889	811507	False	NM_001166260,NM_024786	chr5,chr5	+,-	TRIP13,ZDHHC11	81461,39657
chr15:68500195-68500539	chr15	+	68500203	68500575	True	NM_033429,NM_015322,NM_001031733	chr15,chr15,chr15	-,+,-	CALML4,FEM1B,CALML4	-1755,69565,-1755
chr3:50375626-50376004	chr3	+	50375636	50376052	True	NM_007275,NM_015896,NM_007022,NM_007182,NM_170713,NM_170712,NM_170714	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,+,-,-,-,-	TUSC2,ZMYND10,CYB561D2,RASSF1,RASSF1,RASSF1,RASSF1	-9968,7154,12244,2365,-741,22,2365
chr11:71164626-71164912	chr11	+	71164629	71164787	True	NM_018161,NM_001360,NM_001163817	chr11,chr11,chr11	+,-,-	NADSYN1,DHCR7,DHCR7	-463,-5152,-5152
chr14:103750428-103752059	chr14	+	103750536	103751814	True	NR_033938,NM_001969	chr14,chr14	-,+	LOC100131366,EIF5	-95171,48678
chr7:21259666-21259897	chr7	+	21259806	21259938	True	NM_198956,NM_003112	chr7,chr7	-,+	SP8,SP4	-433298,207750
chr1:150208668-150209605	chr1	+	150208710	150209483	True	NM_012113,NM_001136478,NM_001136479,NM_030920	chr1,chr1,chr1,chr1	+,-,-,-	CA14,ANP32E,ANP32E,ANP32E	20734,-206,-1684,-206
chr3:107243176-107243788	chr3	+	107243175	107243788	True	NM_001142568,NM_020235,NR_028303	chr3,chr3,chr3	+,+,-	BBX,BBX,LOC100302640	-1443,-1443,-283690
chr5:112823790-112824007	chr5	+	112823791	112823929	True	NM_001085377,NM_022828	chr5,chr5	-,+	MCC,YTHDC2	648,25461
chr3:157825194-157825592	chr3	+	157825196	157825606	True	NM_001163678,NM_003030,NM_006884,NM_016625	chr3,chr3,chr3,chr3	-,-,-,+	SHOX2,SHOX2,SHOX2,RSRC1	-1244,-1244,-1244,2285
chr19:57106964-57107865	chr19	+	57107059	57107771	True	NM_021216,NM_001005850	chr19,chr19	+,-	ZNF71,ZNF835	-446,76525
chr1:33646653-33646871	chr1	+	33646653	33646829	True	NM_152493,NM_018207	chr1,chr1	+,-	ZNF362,TRIM62	75344,892
chr1:35259187-35259805	chr1	+	35259328	35259784	True	NM_001164824,NM_002060	chr1,chr1	-,+	C1orf212,GJA4	64912,-780
chr11:77899362-77899574	chr11	+	77899496	77899572	True	NM_001029859,NM_020798	chr11,chr11	-,+	KCTD21,USP35	142,285
chr16:3186959-3187424	chr16	+	3186971	3187439	True	NM_004220,NR_024167,NM_001134655	chr16,chr16,chr16	+,-,+	ZNF213,MGC3771,ZNF213	-1965,-21372,-1888
chr4:122616977-122617389	chr4	+	122617115	122617421	True	NR_024365,NM_001154	chr4,chr4	+,-	LOC100192379,ANXA5	68318,776
chr19:9359449-9360982	chr19	+	9359456	9360734	True	NM_001005191,NM_001079935	chr19,chr19	-,+	OR7D4,OR7E24	-33909,985
chr14:103057344-103057817	chr14	+	103057411	103057801	True	NM_152326,NM_015156	chr14,chr14	-,+	ANKRD9,RCOR1	-81283,1431
chr12:69147918-69148363	chr12	+	69147918	69148050	True	NM_018656,NR_033335	chr12,chr12	+,-	SLC35E3,SNORA70G	-8042,-126763
chr16:20485884-20486733	chr16	+	20485958	20486720	True	NM_174924,NM_001010845	chr16,chr16	-,+	PDILT,ACSM2A	-69925,-23157
chr16:20485884-20486733	chr16	-	20559758	20559920	False	NM_001105069,NM_001010845	chr16,chr16	-,+	ACSM2B,ACSM2A	27832,-96950
chrX:105954955-105955302	chrX	+	105954967	105955339	True	NM_194463,NM_001171706	chrX,chrX	+,-	RNF128,RIPPLY1	14554,191272
chr11:116662158-116663476	chr11	+	116662387	116663491	True	NM_003904,NM_000040,NM_001166598,NM_052968	chr11,chr11,chr11,chr11	-,+,-,-	ZNF259,APOC3,APOA5,APOA5	-3648,37132,-13,-13
chr11:64724329-64725259	chr11	+	64724837	64725226	True	NM_001037225,NM_006244	chr11,chr11	-,+	C11orf85,PPP2R5B	2437,-32749
chr6:27864973-27866167	chr6	+	27865156	27866002	True	NM_003514,NM_003527,NM_003535	chr6,chr6,chr6	-,+,-	HIST1H2AM,HIST1H2BO,HIST1H3J	-4193,-4008,-6586
chr21:47745254-47746398	chr21	+	47745607	47746362	True	NM_006031,NM_058180	chr21,chr21	+,-	PCNT,C21orf58	-1622,-1822
chr12:19290057-19291361	chr12	+	19290433	19291089	True	NM_019012,NM_033123,NM_001143821,NM_001190860	chr12,chr12,chr12,chr12	+,-,+,+	PLEKHA5,PLCZ1,PLEKHA5,PLEKHA5	-7866,-399515,-7866,-7866
chr7:64023249-64023466	chr7	+	64023304	64023452	True	NM_178558,NM_001130022,NR_033245	chr7,chr7,chr7	-,-,+	ZNF680,ZNF680,LOC641746	103,103,19535
chr3:121554599-121555554	chr3	+	121554656	121555582	True	NM_001023570,NM_001023571,NM_018456	chr3,chr3,chr3	-,-,+	IQCB1,IQCB1,EAF2	-730,-730,-674
chr20:18295858-18296334	chr20	+	18296102	18296382	True	NM_003434,NM_001099407	chr20,chr20	+,-	ZNF133,C20orf12	-27033,151497
chr5:177206551-177208122	chr5	+	177206597	177207847	True	NR_003615,NM_173663	chr5,chr5	+,-	LOC728554,FAM153A	94414,111
chr5:177206551-177208122	chr5	-	175490369	175491509	False	NM_032361,NM_001079529	chr5,chr5	-,+	THOC3,FAM153B	-94824,20399
chr5:177206551-177208122	chr5	-	177435984	177437234	False	NM_006261,NM_001079527	chr5,chr5	-,+	PROP1,FAM153C	-12741,-349
chr1:156024580-156024874	chr1	+	156024627	156024789	True	NM_020131,NM_014017,NM_001145264,NM_020387	chr1,chr1,chr1,chr1	-,+,+,+	UBQLN4,LAMTOR2,LAMTOR2,RAB25	-1111,-161,-161,6176
chr8:22016831-22017533	chr8	+	22016857	22017407	True	NM_139278,NM_001199,NM_001172357,NR_033403,NR_033404,NM_001172410,NM_006129,NM_003018	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,+,+,+,+,+,+,+	LGI3,BMP1,SFTPC,BMP1,BMP1,SFTPC,BMP1,SFTPC	-2513,5245,1776,5245,5245,1776,5245,1776
chr20:17660706-17661240	chr20	+	17660760	17661262	True	NM_001042576,NM_001159495,NM_004587	chr20,chr20,chr20	-,+,-	RRBP1,BANF2,RRBP1	1716,13057,1716
chr19:410265-410492	chr19	+	410266	410334	True	NM_001136263,NM_130760	chr19,chr19	-,+	C2CD4C,MADCAM1	-1096,86155
chr4:39480854-39481484	chr4	+	39481159	39481531	True	NR_026854,NM_000661	chr4,chr4	+,-	LOC401127,RPL9	343,-20591
chr11:65405888-65406138	chr11	+	65405887	65406125	True	NM_002419,NM_006747,NM_153253	chr11,chr11,chr11	-,+,+	MAP3K11,SIPA1,SIPA1	-24167,-360,1466
chr13:90885178-90885834	chr13	+	90885490	90885708	True	NR_030754,NR_027039	chr13,chr13	+,-	MIR622,LOC144776	-2116,693203
chr14:66974728-66974931	chr14	+	66974727	66974963	True	NM_015994,NM_001024218,NM_020806	chr14,chr14,chr14	-,+,+	ATP6V1D,GPHN,GPHN	851807,-653,-653
chrX:122992292-122993096	chrX	+	122992576	122993107	True	NM_001204401,NM_001167,NR_037916,NM_001081550	chrX,chrX,chrX,chrX	+,+,+,-	XIAP,XIAP,XIAP,THOC2	554,909,909,-125672
chr19:55417726-55418065	chr19	+	55417854	55418102	True	NM_004829,NR_027041,NR_027043,NM_001127255,NM_001145457,NM_001145458	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,-,+,+	NCR1,NCR1,NCR1,NLRP7,NCR1,NCR1	-397,-397,-397,40821,-397,-397
chr19:12078511-12078814	chr19	+	12078578	12078854	True	NM_001080411,NM_001012753	chr19,chr19	-,+	ZNF433,ZNF763	67721,-2765
chr14:51412882-51413225	chr14	+	51413000	51413207	True	NM_181814,NM_002863,NM_001163940	chr14,chr14,chr14	+,-,-	ABHD12B,PYGL,PYGL	-74180,-1752,-1752
chr1:160807117-160808226	chr1	+	160807137	160808274	True	NM_002348,NM_001166663	chr1,chr1	+,-	LY9,CD244	-41261,24468
chr5:110014882-110016020	chr5	+	110015123	110015765	True	NM_001039763,NM_138773	chr5,chr5	-,+	TMEM232,SLC25A46	46737,58988
chr15:66999115-66999667	chr15	+	66999230	66999606	True	NM_005585,NM_001142861,NM_207338,NR_027654	chr15,chr15,chr15,chr15	+,+,-,+	SMAD6,SMAD6,LCTL,SMAD6	-4607,1323,-141395,-4607
chr3:149096882-149097665	chr3	+	149097010	149097461	True	NM_004617,NM_014220	chr3,chr3	+,-	TM4SF4,TM4SF1	94906,-1442
chr2:152266055-152266334	chr2	+	152266056	152266372	True	NM_004688,NM_001177663,NM_001177665,NM_001177664,NM_018151	chr2,chr2,chr2,chr2,chr2	-,+,+,+,+	NMI,RIF1,RIF1,RIF1,RIF1	-119626,24,231,27,24
chr5:54833263-54833799	chr5	+	54833378	54833468	True	NR_001575,NM_001166533,NM_003711,NM_176895	chr5,chr5,chr5,chr5	-,+,-,-	RNF138P1,DDX4,PPAP2A,PPAP2A	-3008,200376,-2505,-2505
chr19:53102439-53103634	chr19	+	53102523	53103244	True	NR_023311,NM_001105549	chr19,chr19	+,-	ZNF137P,ZNF83	-2642,38457
chr5:43191625-43191877	chr5	+	43191636	43191892	True	NM_153361,NM_001098272	chr5,chr5	+,-	MGC42105,HMGCS1	434,121753
chr19:44809317-44809594	chr19	+	44809319	44809593	True	NM_004234,NM_181756	chr19,chr19	-,+	ZNF235,ZNF233	-141,-45294
chr9:94895187-94896614	chr1	+	202152427	202152905	True	NR_037664,NM_001017403	chr1,chr1	-,+	PTPN7,LGR6	-21711,10212
chr10:52364903-52365266	chr10	+	52364992	52365304	True	NM_147156,NM_001079516	chr10,chr10	-,+	SGMS1,ASAH2B	18483,134403
chr18:32350905-32351385	chr18	+	32350979	32351192	True	NM_001390,NM_001112734	chr18,chr18	+,-	DTNA,ZSCAN30	-15098,519055
chr1:114396781-114398229	chr1	+	114396929	114398244	True	NR_037864,NM_001193431	chr1,chr1	+,-	LOC100287722,PTPN22	1012,16183
chr22:40569538-40570611	chr22	+	40569596	40570576	True	NM_152512,NM_001162501,NM_015088	chr22,chr22,chr22	-,+,+	ENTHD1,TNRC6B,TNRC6B	-279802,3352,3352
chr8:142431932-142432319	chr8	+	142431993	142432255	True	NM_005293,NM_007079,NM_032611	chr8,chr8,chr8	-,+,+	GPR20,PTP4A3,PTP4A3	-54628,-37,-37
chr6:110541806-110543682	chr6	+	110542027	110543027	True	NM_003931,NM_015891	chr6,chr6	-,+	WASF1,CDC40	-40820,-40454
chr2:47166911-47167163	chr2	+	47166945	47167161	True	NM_001171508,NM_020458,NM_001171511	chr2,chr2,chr2	-,+,-	MCFD2,TTC7A,MCFD2	1883,1151,1883
chr6:41117613-41118085	chr6	+	41117620	41118042	True	NR_026938,NM_178174	chr6,chr6	+,-	LOC221442,TREML1	-48898,4078
chr11:113781841-113782043	chr11	+	113781874	113781955	True	NM_020886,NM_006028	chr11,chr11	-,+	USP28,HTR3B	-35618,-6352
chr8:37889750-37890879	chr8	+	37890165	37890928	True	NM_000025,NM_004095	chr8,chr8	-,+	ADRB3,EIF4EBP1	-65981,-2196
chr2:220117984-220118474	chr2	+	220118153	220118496	True	NM_006000,NR_003063,NR_026909,NM_024506,NM_001008910	chr2,chr2,chr2,chr2,chr2	-,+,+,-,+	TUBA4A,TUBA4B,STK16,GLB1L,STK16	192,-239,-8003,-8022,-8012
chr1:228646925-228647181	chr1	+	228646930	228647230	True	NM_033445,NM_175055	chr1,chr1	-,+	HIST3H2A,HIST3H2BB	-1370,-1173
chr19:2280917-2281994	chr19	+	2281054	2281842	True	NM_198532,NM_004152	chr19,chr19	-,+	C19orf35,OAZ1	389,-11585
chr17:73282245-73283479	chr17	+	73282366	73283521	True	NM_021734,NM_001126122,NM_001126121,NR_036520	chr17,chr17,chr17,chr17	-,-,-,+	SLC25A19,SLC25A19,SLC25A19,LOC100287042	2059,2059,2059,-15037
chr19:42260846-42261882	chr19	+	42260903	42261859	True	NM_002483,NM_006890	chr19,chr19	+,-	CEACAM6,CEACAM7	-1556,-68807
chr8:145026751-145026972	chr8	+	145026823	145026903	True	NM_000837,NR_030383,NM_201379,NM_201381,NM_201380,NM_201382	chr8,chr8,chr8,chr8,chr8,chr8	+,-,-,-,-,-	GRINA,MIR661,PLEC,PLEC,PLEC,PLEC	37322,-7376,1235,-7918,-1779,-8713
chr16:89225313-89225719	chr16	+	89225324	89225764	True	NR_024347,NM_005187	chr16,chr16	+,-	C16orf81,CBFA2T3	23,-181820
chr11:126224791-126225159	chr11	+	126224833	126225040	True	NM_006278,NR_033839	chr11,chr11	+,-	ST3GAL4,FLJ39051	1055,493
chr3:196369662-196370415	chr3	+	196370063	196370389	True	NM_032898,NM_198565	chr3,chr3	-,+	C3orf34,LRRC33	68784,-3460
chr20:37383284-37383753	chr20	+	37383517	37383751	True	NR_027241,NM_024855	chr20,chr20	-,+	LOC388796,ACTR5	-319499,-6479
chr2:54687035-54688181	chr2	+	54687185	54688215	True	NM_003128,NM_001003937	chr2,chr2	+,-	SPTBN1,TSPYL6	-3782,-203776
chr4:47973765-47975176	chr4	+	47974036	47974930	True	NM_001142564,NM_207330	chr4,chr4	-,+	CNGA1,NIPAL1	8678,43860
chr4:82065356-82065933	chr4	+	82065401	82065585	True	NM_006259,NM_001201	chr4,chr4	-,+	PRKG2,BMP3	60688,-113334
chr15:22559077-22559652	chr15	+	22559207	22559472	True	NR_027407,NR_033735	chr15,chr15	-,+	GOLGA8DP,REREP3	156311,-12702
chr11:66110257-66112061	chr11	+	66110266	66111891	True	NM_153266,NM_015399,NM_006876,NM_001024957,NM_004292	chr11,chr11,chr11,chr11,chr11	+,-,-,-,-	TMEM151A,BRMS1,B3GNT1,BRMS1,RIN1	-50944,741,3320,741,-6266
chr1:109619989-109621538	chr1	+	109620155	109621133	True	NM_020141,NM_005645	chr1,chr1	+,-	TMEM167B,TAF13	12269,-1531
chrX:135392465-135393779	chrX	+	135392496	135393796	True	NM_001173516,NM_153834	chrX,chrX	-,+	MAP7D3,GPR112	-53855,-9426
chr5:149546985-149547472	chr5	+	149547055	149547419	True	NM_001804,NM_002609	chr5,chr5	+,-	CDX1,PDGFRB	-762,-11633
chr19:17337260-17337566	chr19	+	17337267	17337501	True	NM_005234,NM_024578	chr19,chr19	-,+	NR2F6,OCEL1	18700,-263
chr1:215217659-215217983	chr1	+	215217695	215217956	True	NM_001017425,NM_005401	chr1,chr1	+,-	KCNK2,PTPN14	38603,-492671
chr5:40755128-40755536	chr5	+	40755186	40755513	True	NM_012382,NM_000958	chr5,chr5	-,+	TTC33,PTGER4	614,-75213
chr17:27047860-27048089	chr17	+	27047936	27048054	True	NM_001144942,NR_024575,NR_024579,NM_178170,NM_000984,NR_000014,NM_001144943,NM_031934,NR_000010,NR_000013,NM_152465,NM_138463,NR_000009,NM_001160407,NM_001142624,NM_001142625	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,+,+,+,-,-,+,+,-,-,+,-,-,-	RAB34,RAB34,RAB34,NEK8,RPL23A,SNORD42A,RAB34,RAB34,SNORD4A,SNORD42B,PROCA1,TLCD1,SNORD4B,TLCD1,RAB34,RAB34	-3028,-2685,-2685,7777,-995,2392,-2650,-3028,1545,-427,-9064,5234,2644,5953,-2650,-2650
chr9:46699429-46700190	chr9	+	46699675	46700225	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-3068945,-12165
chr9:46699429-46700190	chr9	-	46831795	46832117	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-3201065,-144286
chr9:46699429-46700190	chr9	-	42007041	42007363	False	NR_003670,NM_001012421	chr9,chr9	-,+	KGFLP2,ANKRD20A2	12276,360939
chr9:46699429-46700190	chr9	+	44257943	44257999	False	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	-627213,-573115
chr9:46699429-46700190	chr9	-	44389892	44390214	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	600021,-759162
chr2:201170817-201171302	chr2	+	201170858	201171266	True	NM_001100422,NM_001100423,NM_152387,NM_015535,NM_001100424	chr2,chr2,chr2,chr2,chr2	+,+,-,+,+	SPATS2L,SPATS2L,KCTD18,SPATS2L,SPATS2L	-28,89,203576,-311,-28
chr5:107009589-107010802	chr5	+	107009592	107010695	True	NM_005246,NM_001962	chr5,chr5	+,-	FER,EFNA5	1072827,-2996
chr2:203105053-203106366	chr2	+	203105749	203106398	True	NM_003352,NM_001005782,NM_001005781,NM_015934	chr2,chr2,chr2,chr2	-,-,-,+	SUMO1,SUMO1,SUMO1,NOP58	-2427,-2427,-2427,24116
chr1:11021508-11022222	chr1	+	11021564	11022223	True	NM_007375,NM_001170754	chr1,chr1	+,-	TARDBP,C1orf127	50455,19921
chr10:5528257-5528795	chr10	+	5528261	5528787	True	NM_017422,NM_005185	chr10,chr10	-,+	CALML5,CALML3	12796,38136
chr19:9293886-9294353	chr19	+	9293893	9294321	True	NM_175883,NM_001005191	chr19,chr19	+,-	OR7D2,OR7D4	1948,31282
chr2:198242719-198243286	chr2	+	198242935	198243289	True	NM_025147,NM_012433	chr2,chr2	+,-	COQ10B,SF3B1	74941,56532
chr11:707208-707493	chr11	+	707256	707456	True	NM_021008,NM_022772	chr11,chr11	-,+	DEAF1,EPS8L2	-11516,-1187
chr15:65066936-65067173	chr15	+	65066971	65067179	True	NM_194272,NM_001195059	chr15,chr15	-,+	RBPMS2,PLEKHO2	641,66902
chr1:24039799-24040374	chr1	+	24039945	24040325	True	NM_001199802,NM_001127621	chr1,chr1	+,-	RPL11,GALE	-21737,85785
chr16:1666324-1667248	chr16	+	1666481	1667223	True	NM_020825,NM_014714	chr16,chr16	+,-	CRAMP1L,IFT140	-1891,-4372
chr16:75184410-75184877	chr16	+	75184612	75184692	True	NM_194436,NM_153688	chr16,chr16	-,+	LDHD,ZFP1	-33942,-2242
chr7:1497530-1497825	chr7	+	1497564	1497700	True	NM_002360,NM_182924	chr7,chr7	+,-	MAFK,MICALL2	72667,1459
chr11:60611860-60612199	chr11	+	60611949	60612223	True	NM_004778,NM_024098	chr11,chr11	-,+	GPR44,CCDC86	11271,-2571
chr13:41830753-41832621	chr13	+	41830815	41832336	True	NM_001110798,NM_004294	chr13,chr13	+,-	NAA16,MTRF1	53004,5434
chr20:30639424-30639931	chr20	+	30639444	30639867	True	NM_030815,NM_002110,NM_001172129,NM_001172131,NM_001172130,NM_001172133,NM_001172132	chr20,chr20,chr20,chr20,chr20,chr20,chr20	-,+,+,+,+,+,+	PDRG1,HCK,HCK,HCK,HCK,HCK,HCK	-99561,123,123,123,123,123,123
chr14:52332886-52334310	chr14	+	52332977	52334345	True	NM_007361,NM_053064	chr14,chr14	-,+	NID2,GNG2	201651,-5978
chrX:134660794-134662060	chrX	+	134661031	134662089	True	NM_007131,NM_182540	chrX,chrX	-,+	ZNF75D,DDX26B	-231066,-6527
chr7:36435291-36436405	chr7	+	36435346	36436233	True	NM_018685,NM_001100425	chr7,chr7	+,-	ANLN,KIAA0895	-5966,-5612
chr19:55586240-55586846	chr19	+	55586542	55586895	True	NM_133180,NM_138412,NM_017729	chr19,chr19,chr19	+,-,+	EPS8L1,RDH13,EPS8L1	325,-5628,4864
chr11:65100077-65100865	chr11	+	65100340	65100448	True	NM_006268,NM_001077241	chr11,chr11	+,-	DPF2,SLC25A45	897,49754
chrX:134977017-134978808	chrX	+	134977372	134978499	True	NM_001017438,NM_018666	chrX,chrX	-,+	CT45A6,SAGE1	-6128,-1639
chr17:44072809-44073806	chr17_ctg5_hap1	-	794201	794573	False	NM_001007532,NR_024559	chr17_ctg5_hap1,chr17_ctg5_hap1	-,+	STH,LOC100128977	-3068,100120
chr17:44072809-44073806	chr17	+	44072847	44073547	True	NM_001007532,NR_024559	chr17,chr17	+,-	STH,LOC100128977	3068,-99968
chr12:82152657-82152939	chr12	+	82152683	82152925	True	NM_032230,NM_003625	chr12,chr12	+,-	C12orf26,PPFIA2	599350,235
chr12:58121506-58122081	chr12	+	58121621	58121865	True	NM_001122772,NR_027032	chr12,chr12	-,+	AGAP2,LOC100130776	10214,-1649
chr6:90143702-90144999	chr6	+	90143741	90145014	True	NM_021244,NM_014942	chr6,chr6	-,+	RRAGD,ANKRD6	-21746,-896
chr14:31925031-31925514	chr14	+	31925052	31925322	True	NM_080664,NM_025152	chr14,chr14	-,+	C14orf126,NUBPL	1408,105268
chr2:190648632-190648893	chr2	+	190648683	190648911	True	NM_001128150,NM_001128144,NM_001128143,NM_016467,NM_000534	chr2,chr2,chr2,chr2,chr2	-,+,+,-,+	ORMDL1,PMS1,PMS1,ORMDL1,PMS1	236,-13,-13,236,-13
chr14:58666858-58667112	chr14	+	58666868	58667048	True	NM_018477,NM_001001872	chr14,chr14	+,-	ACTR10,C14orf37	-86,-48021
chr5:50678469-50678669	chr5	+	50678553	50678627	True	NM_198449,NM_002202	chr5,chr5	-,+	EMB,ISL1	-941319,330
chr1:109257714-109258746	chr1	+	109257896	109258746	True	NM_144584,NM_001144937	chr1,chr1	-,+	HENMT1,FNDC7	-53748,-2396
chr2:128049692-128050899	chr2	+	128049697	128050710	True	NM_000122,NM_000312	chr2,chr2	-,+	ERCC3,PROC	1099,125285
chr9:35650951-35651983	chr9	+	35651239	35651609	True	NM_014450,NM_001195201,NM_001195200,NR_003051,NM_001195217,NM_174923	chr9,chr9,chr9,chr9,chr9,chr9	-,+,+,-,+,+	SIT1,CCDC107,CCDC107,RMRP,CCDC107,CCDC107	-292,6677,6677,6456,6677,6677
chr1:11725708-11726366	chr1	+	11725997	11726248	True	NM_018438,NM_012168	chr1,chr1	+,-	FBXO6,FBXO2	-1905,-11109
chr12:50506407-50506783	chr12	+	50506415	50506700	True	NM_032901,NM_147190,NM_005276	chr12,chr12,chr12	+,-,+	C12orf62,LASS5,GPD1	-566,54448,-8665
chr5:173117845-173118605	chr5	+	173117990	173118334	True	NR_027109,NM_138369	chr5,chr5	+,-	LOC285593,BOD1	-111384,-74324
chr1:145809842-145810190	chr1	+	145809946	145810081	True	NM_001097612,NM_001097616	chr1,chr1	-,+	GPR89A,GPR89C	17085,73786
chr1:145809842-145810190	chr1	-	147417470	147417533	False	NR_003377,NM_001097616	chr1,chr1	-,+	PDZK1P1,GPR89C	66861,8033
chr14:102094218-102094455	chr14	+	102094277	102094447	True	NR_031649,NM_001362	chr14,chr14	-,+	MIR1247,DIO3	-67518,-66640
chr14:58663761-58664395	chr14	+	58664178	58664420	True	NM_018477,NM_001001872	chr14,chr14	+,-	ACTR10,C14orf37	2412,-45331
chr15:82788503-82789902	chr15	+	82788622	82789751	True	NR_026811,NR_033936,NR_033579	chr15,chr15,chr15	-,-,+	LOC80154,LOC727849,LOC440297	8623,8652,-35227
chr15:82788503-82789902	chr15	-	82656205	82657045	False	NR_004847,NR_024474,NM_001164465	chr15,chr15,chr15	+,+,-	UBE2Q2P2,UBE2Q2P3,GOLGA6L10	-8984,-8984,-14499
chr15:82788503-82789902	chr15	-	83032702	83033542	False	NR_004847,NR_024474,NM_001164465	chr15,chr15,chr15	+,+,-	UBE2Q2P2,UBE2Q2P3,GOLGA6L10	-8994,-8994,-14504
chr15:82788503-82789902	chr15	+	83173199	83174328	False	NR_026811,NR_033936,NR_033579	chr15,chr15,chr15	-,-,+	LOC80154,LOC727849,LOC440297	8624,8653,-43218
chr20:31333974-31334512	chr20	+	31334135	31334422	True	NM_006892,NM_001099339,NM_053041	chr20,chr20,chr20	+,-,-	DNMT3B,COMMD7,COMMD7	15768,-2321,-2321
chr7:140898648-140900067	chr7	+	140898689	140900038	True	NM_053035,NM_001195278	chr7,chr7	-,+	MRPS33,LOC100131199	-183908,-124715
chr7:73145642-73146512	chr7	+	73145925	73146217	True	NM_148912,NM_148913,NR_026910,NR_026912,NR_026690,NM_001145364	chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,+,-	ABHD11,ABHD11,ABHD11,ABHD11,WBSCR26,ABHD11	7025,7025,7025,7031,3181,7025
chr11:46639483-46639726	chr11	+	46639511	46639715	True	NR_024589,NR_024588,NM_014741,NR_024587,NM_173811,NM_001205119,NM_001205121,NM_001205120,NM_001205122,NM_001142673	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,-,+,+,+,+,+	ATG13,ATG13,ATG13,ATG13,HARBI1,ATG13,ATG13,ATG13,ATG13,ATG13	-736,-736,-736,-736,-734,-736,-736,-736,-736,-736
chr22:25420901-25421565	chr22	+	25421017	25421575	True	NM_001001663,NM_001145206	chr22,chr22	-,+	TMEM211,KIAA1671	-85703,2365
chr12:7900649-7901044	chr12	+	7900651	7900830	True	NM_203503,NM_001145465,NM_130441	chr12,chr12,chr12	-,+,-	CLEC4C,NANOGNB,CLEC4C	1298,16981,1298
chr2:87201684-87202425	chr2	+	87201799	87202413	True	NM_001032392,NM_001024457	chr2,chr2	-,+	PLGLB1,RGPD1	46609,-57124
chr2:87201684-87202425	chr2	-	88094149	88094763	False	NM_001078170,NM_001032392	chr2,chr2	-,+	RGPD2,PLGLB1	30585,-46593
chr7:155249405-155249623	chr7	+	155249494	155249576	True	NM_001103176,NM_001427	chr7,chr7	-,+	CNPY1,EN2	77013,1247
chr3:36940309-36940638	chr3	+	36940390	36940654	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	45944,94186
chr11:17026803-17027761	chr11	+	17027123	17027636	True	NM_175058,NM_014267	chr11,chr11	-,+	PLEKHA7,C11orf58	8377,-267026
chr2:228041419-228042024	chr2	+	228041461	228041787	True	NM_000091,NM_000092	chr2,chr2	+,-	COL4A3,COL4A4	-12241,-12186
chr15:42384239-42384800	chr15	+	42384338	42384834	True	NM_198141,NM_178034	chr15,chr15	+,-	GANC,PLA2G4D	181531,1968
chr19:36118838-36119493	chr19	+	36119188	36119538	True	NM_000704,NM_024321	chr19,chr19	-,+	ATP4A,RBM42	-64628,441
chr11:133403209-133405040	chr11	+	133403213	133404666	True	NR_027276,NM_001012393	chr11,chr11	+,-	LOC100128239,OPCML	497500,-810
chr17:44252198-44253751	chr17_ctg5_hap1	-	1341377	1342378	False	NR_002940,NR_037772,NM_016632	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	+,-,-	LRRC37A4,CRHR1,ARL17A	138998,-170924,171556
chr17:44252198-44253751	chr17_ctg5_hap1	-	612803	613824	False	NM_001193466,NR_034172	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	KIAA1267,LOC644246	-16683,-17417
chr17:44252198-44253751	chr17	+	44252520	44253537	True	NM_001193466,NR_034172	chr17,chr17	-,+	KIAA1267,LOC644246	16680,17401
chr15:92394610-92395383	chr15	+	92394795	92395409	True	NM_013272,NM_001145044,NR_021493	chr15,chr15,chr15	+,+,-	SLCO3A1,SLCO3A1,LOC100144604	1528,1528,720134
chr1:154127557-154128000	chr1	+	154127649	154127984	True	NM_001159484,NM_207308,NM_001127320	chr1,chr1,chr1	-,-,+	NUP210L,NUP210L,UBAP2L	-57,-57,64670
chr8:80525658-80527454	chr8	+	80525690	80527442	True	NM_001040708,NM_007029,NM_001199214	chr8,chr8,chr8	-,+,+	HEY1,STMN2,STMN2	152721,-2692,-2692
chr3:48349554-48350831	chr3	+	48349760	48350770	True	NM_005793,NM_001159927	chr3,chr3	-,+	NME6,FBXW12	-6912,62938
chr13:101327839-101328699	chr13	+	101327895	101328703	True	NM_032813,NM_001178004,NM_001079669	chr13,chr13,chr13	-,+,-	TMTC4,PCCA,TMTC4	-792,-586677,-792
chr15:40397618-40398207	chr15	+	40397676	40398006	True	NM_001003943,NM_001003942,NM_001003940,NM_001211,NM_033503	chr15,chr15,chr15,chr15,chr15	-,-,-,+,-	BMF,BMF,BMF,BUB1B,BMF	331,331,3119,55203,683
chr4:174291148-174291523	chr4	+	174291168	174291543	True	NM_007281,NM_003864	chr4,chr4	-,+	SCRG1,SAP30	29124,549
chrX:53312098-53312956	chrX	+	53312483	53312847	True	NR_024449,NM_015075,NM_144968	chrX,chrX,chrX	-,-,+	IQSEC2,IQSEC2,RIBC1	-1687,-1687,136991
chr19:45970460-45970802	chr19	+	45970541	45970721	True	NM_001114171,NM_006732,NM_206901	chr19,chr19,chr19	+,+,-	FOSB,FOSB,RTN2	531,531,25803
chr19:36134790-36135061	chr19	+	36134866	36135092	True	NM_000704,NM_001863,NM_014209	chr19,chr19,chr19	-,+,+	ATP4A,COX6B1,ETV2	-80306,4032,-2270
chr2:231977800-231979242	chr2	+	231978091	231979153	True	NM_000867,NR_034059	chr2,chr2	-,+	HTR2B,PSMD1	10723,-56576
chr15:59949725-59950010	chr15	+	59949856	59950048	True	NM_004751,NM_004492	chr15,chr15	+,-	GCNT3,GTF2A2	-45925,-119
chr6:43265485-43266249	chr6	+	43265558	43266168	True	NM_006672,NM_153320,NM_206922	chr6,chr6,chr6	+,+,-	SLC22A7,SLC22A7,CRIP3	-63,-63,10412
chr19:47138039-47138282	chr19	+	47138119	47138281	True	NM_033258,NM_000960,NM_005184	chr19,chr19,chr19	-,-,+	GNG8,PTGIR,CALM3	-180,-9765,-33658
chr12:100968225-100969350	chr12	+	100968284	100969096	True	NM_174942,NM_152317	chr12,chr12	+,-	GAS2L3,DEPDC4	-846,-307427
chr1:43279521-43280098	chr1	+	43279568	43280108	True	NM_199342,NM_001017922	chr1,chr1	-,+	CCDC23,ERMAP	3007,2667
chr1:145472077-145472473	chr1	+	145472081	145472357	True	NM_001039888,NM_032305,NM_153713	chr1,chr1,chr1	+,-,+	ANKRD34A,POLR3GL,LIX1L	-1624,-1694,4727
chr5:177614820-177615516	chr5	+	177614867	177615523	True	NR_003281,NM_004499	chr5,chr5	-,+	GMCL1L,HNRNPAB	-434,15984
chr7:55918017-55918589	chr7	+	55918187	55918420	True	NM_182633,NM_207366	chr7,chr7	+,-	ZNF713,SEPT14	61910,12117
chr1:98313812-98315091	chr1	+	98314032	98315131	True	NM_000110,NM_015976	chr1,chr1	-,+	DPYD,SNX7	71534,812104
chr3:122525355-122525707	chr3	+	122525688	122525756	True	NM_024610,NM_032839	chr3,chr3	-,+	HSPBAP1,DIRC2	-13038,-11841
chr10:123728579-123729841	chr10	+	123728934	123729665	True	NM_206861,NM_017615,NM_001167865	chr10,chr10,chr10	+,-,-	TACC2,NSMCE4A,NSMCE4A	19023,5136,5136
chr9:66492057-66493151	chr9	+	66492320	66493129	True	NR_024443,NR_024496	chr9,chr9	-,+	LOC100133920,LOC442421	537903,1139
chr9:66492057-66493151	chr9	+	45355219	45355676	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-365042,-1724489
chr5:143567513-143568913	chr5	+	143567528	143568742	True	NM_020768,NM_030799	chr5,chr5	+,-	KCTD16,YIPF5	-17154,-17250
chr1:40560923-40562819	chr1	+	40561040	40562550	True	NM_001142604,NM_006367,NM_000310	chr1,chr1,chr1	-,+,-	PPT1,CAP1,PPT1	642,-54836,642
chrX:79268108-79268410	chrX	+	79268181	79268435	True	NM_001109878,NM_001109879,NM_004867,NM_016954	chrX,chrX,chrX,chrX	+,+,-,+	TBX22,TBX22,ITM2A,TBX22	1819,1819,-645132,9306
chr19:17391783-17392090	chr19	+	17391870	17392122	True	NM_152363,NM_031941	chr19,chr19	+,-	ANKLE1,USHBP1	331,-16326
chr16:3551636-3552298	chr16	+	3551855	3552073	True	NM_015041,NM_024793,NM_001080524	chr16,chr16,chr16	+,+,-	CLUAP1,CLUAP1,C16orf90	-943,7820,-6434
chr15:78585975-78586949	chr15	+	78585975	78586755	True	NM_025234,NM_001130183	chr15,chr15	-,+	WDR61,DNAJA4	5235,-27472
chr16:24266345-24266745	chr16	+	24266367	24266785	True	NM_006539,NM_033266	chr16,chr16	+,-	CACNG3,ERN2	88,-541546
chr8:52703288-52703835	chr8	+	52703303	52703875	True	NM_144651,NM_005285	chr8,chr8	-,+	PXDNL,NPBWR1	18180,1148592
chr21:37910834-37911245	chr21	+	37910970	37911198	True	NM_005441,NM_001146078	chr21,chr21	+,-	CHAF1B,CLDN14	-153332,3750
chr18:13824270-13825449	chr18	+	13824388	13825324	True	NM_005913,NM_000529	chr18,chr18	+,-	MC5R,MC2R	218,90261
chr19:53397059-53397584	chr19	+	53397155	53397268	True	NM_152473,NM_207333	chr19,chr19	+,-	HERV-V1,ZNF320	120075,-2556
chr19:9927739-9929096	chr19	+	9928040	9928982	True	NM_001048241,NM_024292,NM_017703	chr19,chr19,chr19	+,+,-	UBL5,UBL5,FBXL12	9585,9585,799
chr8:146050545-146051031	chr8	+	146050655	146051079	True	NM_001081004,NM_003416	chr8,chr8	-,+	COMMD5,ZNF7	27422,1823
chr1:46910944-46911375	chr1	+	46910987	46911325	True	NM_001097611,NM_001441	chr1,chr1	-,+	KNCN,FAAH	105612,-51099
chr19:1940470-1940674	chr19	+	1940475	1940707	True	NR_033400,NM_001319	chr19,chr19	-,+	C19orf34,CSNK1G2	13891,453
chr19:47924411-47924657	chr19	+	47924469	47924543	True	NM_001009813,NM_014681,NM_020160	chr19,chr19,chr19	-,+,-	MEIS3,DHX34,MEIS3	-1684,-71982,-1684
chr11:66043875-66044098	chr11	+	66043874	66044086	True	NM_030981,NM_020470,NM_182553	chr11,chr11,chr11	+,-,+	RAB1B,YIF1A,CNIH2	-7869,12602,1609
chr11:34641923-34642570	chr11	+	34641942	34642605	True	NM_001422,NM_012153	chr11,chr11	-,+	ELF5,EHF	-106612,-18
chr9:134944658-134945374	chr9	+	134944788	134945328	True	NM_032536,NM_004269	chr9,chr9	+,-	NTNG2,MED27	92005,9975
chr18:5297024-5297379	chr18	+	5297028	5297416	True	NR_026569,NM_003409,NM_001143823,NR_015389	chr18,chr18,chr18,chr18	-,-,-,+	ZFP161,ZFP161,ZFP161,LOC339290	-1328,-989,-989,-58980
chr4:76554977-76556043	chr4	+	76555202	76556017	True	NM_003948,NM_178497	chr4,chr4	-,+	CDKL2,C4orf26	-31,-73998
chr12:57028822-57029115	chr12	+	57028858	57029112	True	NR_003046,NM_002898,NM_013449,NR_002737	chr12,chr12,chr12,chr12	-,+,-,-	SNORD59B,RBMS2,BAZ2A,SNORD59A	8476,-113300,1101,9823
chrX:15332543-15334247	chrX	+	15332640	15334170	True	NM_001201583,NM_080873,NM_001012428,NM_203281	chrX,chrX,chrX,chrX	-,-,-,+	ASB11,ASB11,ASB11,BMX	-80,-80,41,184729
chr20:42143500-42145455	chr20	+	42144278	42145345	True	NM_032107,NM_001008901,NM_015478	chr20,chr20,chr20	+,-,+	L3MBTL1,GTSF1L,L3MBTL1	-8010,210360,-1254
chr19:12471859-12472742	chr19	+	12472124	12472432	True	NM_003437,NM_030824	chr19,chr19	+,-	ZNF136,ZNF442	-198314,4100
chr15:78730056-78730521	chr15	+	78730128	78730514	True	NM_025234,NM_004136	chr15,chr15	-,+	WDR61,IREB2	-138188,3
chr8:118174717-118176175	chr8	+	118174742	118175773	True	NM_173851,NM_006265	chr8,chr8	+,-	SLC30A8,RAD21	-27464,-287637
chr3:13694636-13695282	chr3	+	13694661	13695331	True	NM_004625,NR_027103	chr3,chr3	-,+	WNT7A,LOC285375	226337,-2491
chr19:14014807-14015212	chr19	+	14014836	14015258	True	NM_024323,NM_017721	chr19,chr19	-,+	C19orf57,CC2D1A	1706,1697
chr8:67622041-67622562	chr8	+	67622063	67622436	True	NM_001033578,NM_025054	chr8,chr8	+,-	SGK3,VCPIP1	2216,-42611
chr20:62496289-62496568	chr20	+	62496365	62496609	True	NM_080622,NM_025224,NM_199359,NM_003288,NM_199363,NM_199362,NM_199361,NM_199360	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,-,+,+,+,+,+,+	ABHD16B,ZBTB46,TPD52L2,TPD52L2,TPD52L2,TPD52L2,TPD52L2,TPD52L2	-3850,-59509,-20,-20,-20,-20,-20,-20
chr20:38904612-38906108	chr20	+	38904621	38905951	True	NM_003286,NM_005461	chr20,chr20	+,-	TOP1,MAFB	751510,411983
chr11:47598318-47599299	chr11	+	47598524	47599256	True	NM_018095,NR_024222,NM_004551,NM_001164379,NM_016506	chr11,chr11,chr11,chr11,chr11	-,-,+,+,-	KBTBD4,KBTBD4,NDUFS3,FAM180B,KBTBD4	1361,1361,1305,8973,1315
chr8:61183649-61184678	chr8	+	61184192	61184679	True	NM_004056,NM_002865	chr8,chr8	-,+	CA8,RAB2A	9326,244879
chr5:150129625-150131022	chr5	+	150129871	150131035	True	NM_032947,NM_001135644,NM_001135643,NM_016221	chr5,chr5,chr5,chr5	+,-,-,-	C5orf62,DCTN4,DCTN4,DCTN4	26472,7103,7678,7678
chr1:210000887-210001142	chr1	+	210000924	210001101	True	NM_006147,NM_014388	chr1,chr1	-,+	IRF6,DIEXF	-21445,210
chr6:105622291-105622896	chr6	+	105622429	105622721	True	NR_037157,NM_022361,NR_024539	chr6,chr6,chr6	+,-,-	C6orf112,POPDC3,POPDC3	-36926,5199,1471
chr8:26149197-26149503	chr8	+	26149297	26149546	True	NM_001177591,NM_007257,NM_002717	chr8,chr8,chr8	+,-,+	PPP2R2A,PNMA2,PPP2R2A	1185,221987,-341
chr6:34856156-34857019	chr6	+	34856157	34856797	True	NM_005643,NM_015245	chr6,chr6	-,+	TAF11,ANKS1A	-338,240
chr20:37555815-37556232	chr20	+	37555819	37556137	True	NM_030919,NR_027124	chr20,chr20	+,-	FAM83D,LOC339568	-915,297304
chrX:134846406-134846985	chrX	+	134846548	134846618	True	NM_001017417,NM_001017436	chrX,chrX	+,-	CT45A1,CT45A4	566,90173
chr9:66957941-66958796	chr9	+	66958044	66958234	True	NR_024443,NR_024496	chr9,chr9	-,+	LOC100133920,LOC442421	72798,-463826
chr9:66957941-66958796	chr9	-	70089818	70340461	False	NM_001126334,NM_201453	chr9,chr9	-,+	FOXD4L5,CBWD3	88997,516377
chr9:66957941-66958796	chr9	-	69724106	69724195	False	NM_001126334,NR_024443	chr9,chr9	-,+	FOXD4L5,LOC100133920	454701,-72817
chr15:69609009-69609785	chr15	+	69609464	69609744	True	NM_001104554,NM_006305	chr15,chr15	+,-	PAQR5,ANP32A	-2786,-496203
chr11:116695820-116696353	chr11	+	116695854	116696390	True	NM_000482,NM_000040	chr11,chr11	-,+	APOA4,APOC3	-1843,4233
chr6:112936766-112937737	chr6	+	112936951	112937721	True	NM_001105209,NM_001013734	chr6,chr6	-,+	LAMA4,RFPL4B	-361123,-268470
chr14:102976839-102977146	chr14	+	102976844	102976904	True	NM_152326,NR_036192	chr14,chr14	-,+	ANKRD9,MIR4309	-716,29076
chr3:4795494-4796013	chr3	+	4795647	4796061	True	NR_004428,NM_003670	chr3,chr3	-,+	EGOT,BHLHE40	-2373,225035
chr9:118259344-118260743	chr9	+	118259421	118260769	True	NM_017418,NM_002160	chr9,chr9	+,-	DEC1,TNC	-355385,-378935
chr3:125091732-125092270	chr3	+	125091931	125092318	True	NM_021964,NR_024250	chr3,chr3	-,+	ZNF148,LOC100125556	1932,543125
chr2:172749028-172749591	chr2	+	172749028	172749600	True	NM_003705,NM_003642	chr2,chr2	-,+	SLC25A12,HAT1	1269,29334
chrY:24443772-24444150	chrY	+	24443783	24444147	True	NR_001541,NR_002193	chrY,chrY	-,+	TTTY5,RBMY2FP	926,10858
chr8:124860794-124861190	chr8	+	124860815	124861188	True	NM_004306,NM_001039112	chr8,chr8	-,+	ANXA13,FER1L6	-111168,3038
chr5:49735367-49736222	chr5	+	49735471	49735888	True	NM_198449,NM_001178055	chr5,chr5	-,+	EMB,PARP8	1400,225844
chr4:57301514-57302136	chr4	+	57301941	57302133	True	NM_006452,NM_002703,NM_001079524,NM_001079525	chr4,chr4,chr4,chr4	+,-,+,+	PAICS,PPAT,PAICS,PAICS	-77,-139,135,135
chr15:91262513-91263903	chr15	+	91263029	91263604	True	NM_198527,NM_000057	chr15,chr15	-,+	HDDC3,BLM	212229,-2501
chr18:54309098-54309427	chr18	+	54309098	54309356	True	NM_052834,NM_015285,NM_004786,NR_024546	chr18,chr18,chr18,chr18	+,+,-,-	WDR7,WDR7,TXNL1,TXNL1	9259,9259,-3178,-3178
chr6:116694341-116694802	chr6	+	116694525	116694825	True	NM_003309,NM_013352	chr6,chr6	-,+	TSPYL1,DSE	-93245,-2474
chr2:219436763-219437216	chr2	+	219437062	219437169	True	NM_020935,NM_005444	chr2,chr2	-,+	USP37,RQCD1	-3978,-3443
chr12:6659583-6660391	chr12	+	6659648	6660214	True	NM_001039670,NM_001193457,NM_080730,NR_036467,NM_002046	chr12,chr12,chr12,chr12,chr12	-,-,-,-,+	IFFO1,IFFO1,IFFO1,IFFO1,GAPDH	5085,5085,5085,5085,-16042
chr16:85046435-85046938	chr16	+	85046591	85046815	True	NM_017740,NM_001145548,NM_014732	chr16,chr16,chr16	-,-,+	ZDHHC7,ZDHHC7,KIAA0513	-1450,-1450,14594
chr1:89357164-89358086	chr1	+	89357224	89357919	True	NM_006256,NM_001514	chr1,chr1	+,-	PKN2,GTF2B	-207353,-43
chr1:16848516-16849002	chr1	+	16848543	16849027	True	NR_023386,NR_037446	chr1,chr1	-,+	CROCCP3,MIR3675	-29347,26381
chr1:16848516-16849002	chr1	-	17214310	17214365	False	NM_014675,NR_037446	chr1,chr1	+,-	CROCC,MIR3675	34079,-28794
chr2:120188432-120188910	chr2	+	120188773	120188923	True	NM_001017927,NM_183240	chr2,chr2	-,+	C2orf76,TMEM37	-64515,522
chr15:74898892-74900246	chr15	+	74898965	74899812	True	NM_001130028,NM_003992,NM_001142443	chr15,chr15,chr15	+,+,-	CLK3,CLK3,EDC3	7522,900,88624
chr3:135980373-135982266	chr3	+	135980383	135981733	True	NM_001178014,NM_018133	chr3,chr3	+,-	PCCB,MSL2	-11275,-65695
chr2:178063028-178063332	chr2	+	178063198	178063284	True	NM_194247,NR_036075	chr2,chr2	+,-	HNRNPA3,MIR3128	14137,57504
chr1:211506621-211507132	chr1	+	211507117	211507181	True	NM_001033910,NM_001164688,NM_004619	chr1,chr1,chr1	+,-,+	TRAF5,RD3,TRAF5	-7020,159128,-7211
chr15:55578107-55579411	chr15	+	55578200	55579113	True	NM_004855,NM_183235	chr15,chr15	+,-	PIGB,RAB27A	32019,2949
chr2:200773625-200774222	chr2	+	200773666	200773910	True	NM_001039693,NM_153689	chr2,chr2	-,+	C2orf60,C2orf69	46599,2068
chr2:132250042-132250327	chr2	+	132250089	132250331	True	NM_001085365,NR_026922	chr2,chr2	-,+	MZT2A,LOC150776	-25,54
chr5:33988220-33989457	chr5	+	33988346	33989496	True	NM_001012509,NM_016568,NM_016180	chr5,chr5,chr5	-,+,-	SLC45A2,RXFP3,SLC45A2	-3566,-51906,-3566
chr7:149567082-149568386	chr7	+	149567086	149568292	True	NM_001100592,NM_145230,NR_027040	chr7,chr7,chr7	+,+,-	ATP6V0E2,ATP6V0E2,LOC401431	1764,1764,2709
chr10:8098557-8098953	chr10	+	8098562	8099001	True	NR_024255,NM_002051,NR_024256,NM_001002295	chr10,chr10,chr10,chr10	-,+,-,+	FLJ45983,GATA3,FLJ45983,GATA3	-3115,-1946,-3115,-1946
chr1:19639232-19639436	chr1	+	19639358	19639484	True	NM_003689,NM_001040125,NM_001040126,NM_017765	chr1,chr1,chr1,chr1	-,+,+,+	AKR7A2,PQLC2,PQLC2,PQLC2	-718,-669,-669,-669
chr3:170745824-170746099	chr3	+	170745856	170746128	True	NM_000340,NM_001185056	chr3,chr3	-,+	SLC2A2,CLDN11	-1088,-606886
chr8:145438955-145439380	chr8	+	145439012	145439374	True	NM_016458,NM_015201	chr8,chr8	+,-	FAM203A,BOP1	-1183,75796
chr8:145438955-145439380	chr8	+	145193804	145194166	False	NM_030974,NM_032450,NM_016458,NM_001099281,NM_001099280	chr8,chr8,chr8,chr8,chr8	-,+,+,+,+	SHARPIN,HEATR7A,FAM203A,HEATR7A,HEATR7A	-34664,8752,-1183,8752,8752
chr11:66512275-66512644	chr11	+	66512316	66512654	True	NM_024650,NM_006946	chr11,chr11	+,-	C11orf80,SPTBN2	-160,-23446
chr16:82204059-82204319	chr16	+	82204178	82204288	True	NM_005792,NM_002153	chr16,chr16	-,+	MPHOSPH6,HSD17B2	-349,-135371
chr10:27233059-27233519	chr10	+	27233097	27233553	True	NR_026795,NM_001172303	chr10,chr10	-,+	NCRNA00202,MASTL	-2167,210199
chr3:14582964-14583391	chr3	+	14582963	14583365	True	NM_016474,NM_001080423	chr3,chr3	+,-	C3orf19,GRIP2	109887,273
chr19:33790534-33791032	chr19	+	33790614	33790818	True	NR_026887,NM_004364	chr19,chr19	+,-	LOC80054,CEBPA	2944,2662
chr5:149320354-149320586	chr5	+	149320361	149320627	True	NM_000440,NM_000112	chr5,chr5	-,+	PDE6A,SLC26A2	3779,19672
chr17:74707564-74708349	chr17	+	74707660	74708157	True	NM_001008528,NM_001008529,NM_001080510,NM_198530	chr17,chr17,chr17,chr17	-,-,+,-	MXRA7,MXRA7,METTL23,MXRA7	-604,-604,14792,-604
chr17:56619771-56620165	chr17	+	56619828	56620207	True	NM_001198713,NM_001038704,NM_002876	chr17,chr17,chr17	-,-,+	SEPT4,C17orf47,RAD51C	-1649,1531,149755
chr15:23252500-23253539	chr15	+	23253491	23253558	True	NR_024074,NR_003521	chr15,chr15	+,-	GOLGA8IP,WHAMML1	1683,-45134
chr17:8923564-8923895	chr17	+	8923593	8923821	True	NM_004822,NM_001142633	chr17,chr17	+,-	NTN1,PIK3R5	1037,-54569
chr16:77232111-77233948	chr16	+	77232157	77233831	True	NM_001129979,NM_014940,NM_199355	chr16,chr16,chr16	+,+,-	SYCE1L,MON1B,ADAMTS18	74,-7372,235230
chr15:41188938-41189415	chr15	+	41189043	41189167	True	NM_020857,NM_133639	chr15,chr15	+,-	VPS18,RHOV	-2475,-22556
chr6:167530354-167530875	chr6	+	167530391	167530893	True	NM_005299,NM_031409,NM_004367	chr6,chr6,chr6	-,+,+	GPR31,CCR6,CCR6	40478,5347,-5147
chr8:8086079-8086303	chr8	+	8086114	8086204	True	NR_024361,NR_031689,NR_024363,NR_024362	chr8,chr8,chr8,chr8	+,-,+,+	FLJ10661,MIR548I3,FLJ10661,FLJ10661	-73,-139503,-73,-73
chr3:31583361-31584480	chr3	+	31583362	31584217	True	NM_178862,NM_001174060	chr3,chr3	+,-	STT3B,OSBPL10	-8922,439183
chr14:67825081-67825321	chr14	+	67825183	67825249	True	NM_004094,NM_015994	chr14,chr14	+,-	EIF2S1,ATP6V1D	1784,1525
chr22:46401166-46401511	chr22	+	46401165	46401455	True	NM_058238,NR_027240	chr22,chr22	-,+	WNT7B,LOC730668	-28157,1040
chr3:121553258-121553575	chr3	+	121553346	121553606	True	NM_001023570,NM_001023571,NM_018456	chr3,chr3,chr3	-,-,+	IQCB1,IQCB1,EAF2	370,370,427
chr20:23505338-23506599	chr20	+	23505518	23506320	True	NM_080610,NR_001279	chr20,chr20	-,+	CST9L,CSTT	43116,-5798
chr19:55739995-55740741	chr19	+	55740168	55740786	True	NM_173804,NM_032430	chr19,chr19	-,+	TMEM86B,BRSK1	34,54747
chr22:37680204-37680680	chr22	+	37680268	37680716	True	NM_013385,NM_002872	chr22,chr22	+,-	CYTH4,RAC2	-1824,-39963
chr3:46755586-46755882	chr3	+	46755623	46755911	True	NM_013270,NM_147196	chr3,chr3	-,+	PRSS50,TMIE	3512,-12851
chr3:125482259-125484178	chr3	+	125482792	125483618	True	NR_024250,NR_031687	chr3,chr3	+,-	LOC100125556,MIR548I1	151825,25827
chr20:56974211-56974663	chr20	+	56974388	56974479	True	NR_003505,NR_036633	chr20,chr20	-,+	PPP4R1L,VAPB	-89893,-10274
chr5:138943441-138943971	chr5	+	138943531	138943688	True	NM_003339,NM_181838,NM_198282	chr5,chr5,chr5	+,+,-	UBE2D2,UBE2D2,TMEM173	-2839,-2839,-81188
chr12:15134479-15134961	chr12	+	15134518	15134927	True	NM_001175,NM_006205	chr12,chr12	-,+	ARHGDIB,PDE6H	-19956,-8623
chr3:47515677-47516004	chr3	+	47515773	47516013	True	NM_012235,NM_015466	chr3,chr3	-,+	SCAP,PTPN23	1486,-93342
chr10:48362029-48364015	chr10	+	48362134	48363970	True	NM_002900,NM_153034	chr10,chr10	-,+	RBP3,ZNF488	27071,-7096
chrX:46301835-46302311	chrX	+	46301843	46302333	True	NM_001039891,NM_001129898,NM_001129899,NM_001129900,NM_017776	chrX,chrX,chrX,chrX,chrX	-,+,+,+,+	ZNF674,ZNF673,ZNF673,ZNF673,ZNF673	102609,4290,4290,4290,4290
chr9:37485949-37486223	chr9	+	37485967	37486215	True	NM_022490,NM_014872	chr9,chr9	+,-	POLR1E,ZBTB5	-73,-20560
chr1:51987099-51987722	chr1	+	51987098	51987774	True	NM_001981,NM_024586	chr1,chr1	-,+	EPS15,OSBPL9	-2103,94771
chr11:46144390-46146046	chr11	+	46144468	46145799	True	NM_001101802,NM_052854,NM_016621	chr11,chr11,chr11	-,+,-	PHF21A,CREB3L1,PHF21A	-1483,153428,-1483
chr1:159926834-159927949	chr1	+	159927616	159927998	True	NM_033438,NM_001146172,NM_001146173,NM_004983	chr1,chr1,chr1,chr1	-,-,-,+	SLAMF9,SLAMF9,SLAMF9,KCNJ9	-3572,-3572,-3572,123361
chr19:14786487-14786835	chr19	+	14786514	14786641	True	NM_032433,NM_032571	chr19,chr19	+,-	ZNF333,EMR3	14228,-784
chr11:20690221-20690867	chr11	+	20690239	20690890	True	NM_201551,NM_006157,NM_001029865	chr11,chr11,chr11	+,+,-	NELL1,NELL1,DBX1	226,226,-508369
chr8:92095070-92095535	chr8	+	92095224	92095561	True	NM_016023,NM_018710	chr8,chr8	+,-	OTUD6B,TMEM55A	-12859,-42021
chr2:171786392-171786793	chr2	+	171786431	171786832	True	NM_015530,NM_001136555,NM_001201428	chr2,chr2,chr2	+,-,+	GORASP2,TLK1,GORASP2	-1448,136701,-1536
chr12:121649164-121649636	chr12	+	121649287	121649459	True	NM_002560,NM_172226	chr12,chr12	+,-	P2RX4,CAMKK2	-1676,85147
chr3:23984881-23986372	chr3	+	23985249	23986267	True	NM_001145425,NM_005126,NM_020345	chr3,chr3,chr3	+,+,-	NR1D2,NR1D2,NKIRAS1	1344,483,-26712
chr16:31404304-31404854	chr16	+	31404307	31404887	True	NM_005353,NM_005205	chr16,chr16	+,-	ITGAD,COX6A2	-83,34912
chr17:49199506-49200051	chr17	+	49199575	49199949	True	NM_001130528,NM_001018136,NM_003971	chr17,chr17,chr17	-,+,-	SPAG9,NME1-NME2,SPAG9	-1349,30947,-1349
chr15:94942716-94943178	chr15	+	94942840	94943128	True	NM_001159644,NR_034095	chr15,chr15	+,-	MCTP2,LOC400456	-43734,927257
chr1:153583341-153584307	chr1	+	153583373	153584201	True	NM_080388,NM_006271,NM_020672	chr1,chr1,chr1	-,+,-	S100A16,S100A1,S100A14	1363,16671,4639
chr3:50541726-50543547	chr3	+	50542112	50543488	True	NM_006030,NM_016173,NM_001005505,NM_001174051	chr3,chr3,chr3,chr3	-,+,-,-	CACNA2D2,HEMK1,CACNA2D2,CACNA2D2	-1220,63420,-1220,-1220
chr16:18940224-18940432	chr16	+	18940256	18940324	True	NM_015092,NM_024847	chr16,chr16	-,+	SMG1,TMC7	-2530,54931
chr16:18940224-18940432	chr16	+	21516111	21516173	False	NM_001077180,NR_027155	chr16,chr16	+,-	METTL9,LOC100271836	94682,-2509
chr16:18940224-18940432	chr16	+	29609239	29609301	False	NR_002593,NM_001030288	chr16,chr16	-,+	SLC7A5P1,SPN	15793,64998
chr11:58911296-58912161	chr11	+	58911432	58912189	True	NM_198847,NM_001142519,NM_001142520,NM_022074,NM_001142521,NM_001039396	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,-	FAM111A,FAM111A,FAM111A,FAM111A,FAM111A,MPEG1	62,-1169,-1169,62,-1169,68355
chr3:126241413-126242512	chr3	+	126241492	126242502	True	NM_144639,NM_001165974,NM_152889	chr3,chr3,chr3	-,-,+	UROC1,UROC1,CHST13	-4876,-4876,673
chr12:127652619-127654255	chr12	+	127652812	127654081	True	NR_033970,NR_033987	chr12,chr12	-,+	LOC440117,FLJ37505	-293576,712080
chr1:84764868-84766588	chr1	+	84765100	84766459	True	NM_001134664,NM_001010971,NM_001134663,NR_003927	chr1,chr1,chr1,chr1	+,+,+,-	SAMD13,SAMD13,SAMD13,UOX	1874,-1102,829,97171
chr22:24232892-24233425	chr22	+	24232945	24233461	True	NM_198440,NM_002415	chr22,chr22	-,+	DERL3,MIF	-51746,3103
chr14:71372236-71372786	chr14	+	71372241	71372799	True	NM_014982,NM_033141	chr14,chr14	+,-	PCNX,MAP3K9	1322,-96353
chr17:3183724-3184264	chr17	+	3183899	3184305	True	NM_002551,NR_024128	chr17,chr17	-,+	OR3A2,OR3A4	-1631,29233
chr4:175749809-175750329	chr4	+	175749820	175750254	True	NM_001130703,NM_006529,NM_001042543	chr4,chr4,chr4	+,-,-	ADAM29,GLRA3,GLRA3	89254,261,261
chr19:35740534-35740797	chr19	+	35740536	35740778	True	NM_205835,NM_015925,NM_152481,NM_205834	chr19,chr19,chr19,chr19	+,+,-,+	LSR,LSR,FAM187B,LSR	-1028,-1028,-20908,-1028
chr1:54357964-54358444	chr1	+	54358408	54358470	True	NM_000792,NM_213593,NR_036640,NM_018982,NR_036639,NM_001039716,NM_001039715	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,-,-,+,+	DIO1,DIO1,YIPF1,YIPF1,YIPF1,DIO1,DIO1	1390,1390,-2921,-2921,-2921,1390,1390
chr8:21967348-21967601	chr8	+	21967347	21967537	True	NM_024815,NM_022749	chr8,chr8	-,+	NUDT18,FAM160B2	-415,-20691
chr2:163626019-163627708	chr2	+	163626019	163627727	True	NM_033272,NM_012198	chr2,chr2	-,+	KCNH7,GCA	67589,-425488
chr13:44453780-44454100	chr13	+	44454006	44454146	True	NM_153218,NM_001128303,NM_144974	chr13,chr13,chr13	+,+,-	C13orf31,C13orf31,CCDC122	-88,-637,-180
chr17:48072607-48073305	chr17	+	48072610	48073354	True	NM_005220,NM_001934	chr17,chr17	-,+	DLX3,DLX4	-22,-22531
chr19:15905662-15906875	chr19	+	15905741	15906928	True	NM_013940,NM_001004466	chr19,chr19	-,+	OR10H1,OR10H5	12067,-933
chr7:87611652-87612165	chr7	+	87611762	87611911	True	NM_021723,NM_018843	chr7,chr7	+,-	ADAM22,SLC25A40	-48249,-106070
chr6:7728104-7728449	chr6	+	7728292	7728401	True	NM_001145549,NM_001718	chr6,chr6	-,+	TXNDC5,BMP6	181960,-1332
chr10:102045476-102045899	chr10	+	102045479	102045931	True	NM_005063,NM_001001342,NM_173809	chr10,chr10,chr10	+,-,-	SCD,BLOC1S2,BLOC1S2	60840,233,558
chr5:175788801-175790575	chr5	+	175789016	175789874	True	NM_173664,NM_001079685,NM_001079684,NM_020444	chr5,chr5,chr5,chr5	+,-,-,-	ARL10,KIAA1191,KIAA1191,KIAA1191	2627,-207,-207,-207
chr3:56836298-56836606	chr3	+	56836541	56836603	True	NM_019555,NR_024460	chr3,chr3	-,+	ARHGEF3,CCDC66	-546,-245409
chr4:88901091-88902606	chr4	+	88901298	88902652	True	NM_001040058,NM_001040060,NM_000582,NM_004827	chr4,chr4,chr4,chr4	+,+,+,-	SPP1,SPP1,SPP1,ABCG2	-4547,-4547,-4547,177410
chr11:62606857-62607073	chr11	+	62606971	62607117	True	NM_003164,NM_018093,NM_001012662	chr11,chr11,chr11	-,-,+	STX5,WDR74,SLC3A2	-7411,561,16366
chr16:764260-764461	chr16	+	764284	764346	True	NM_153350,NM_024042,NM_023933	chr16,chr16,chr16	-,+,+	FBXL16,METRN,FAM173A	-8459,826,6811
chr3:183820482-183821126	chr3	+	183820875	183821000	True	NM_182589,NM_001023587	chr3,chr3	+,-	HTR3E,ABCC5	-2966,-85148
chr2:219536961-219537287	chr2	+	219536969	219537245	True	NM_022453,NM_015690	chr2,chr2	-,+	RNF25,STK36	-188,-258
chr10:62671676-62672150	chr10	+	62671693	62671891	True	NM_033379,NM_014836	chr10,chr10	+,-	CDK1,RHOBTB1	-133533,32202
chr12:96163828-96164218	chr12	+	96163959	96164267	True	NM_003095,NM_021229	chr12,chr12	+,-	SNRPF,NTN4	88441,20319
chr7:149159062-149159456	chr7	+	149159069	149159429	True	NM_015694,NR_036573	chr7,chr7	-,+	ZNF777,LOC155060	-1016,-176757
chr10:102823421-102824890	chr10	+	102823798	102824846	True	NM_024895,NM_030929	chr10,chr10	-,+	PDZD7,KAZALD1	-32884,-2850
chr4:124571000-124572576	chr4	+	124571199	124572591	True	NM_198041,NR_027105	chr4,chr4	-,+	NUDT6,LOC285419	-727076,1348
chr12:89917622-89918210	chr12	+	89917709	89918177	True	NR_037660,NM_172240,NM_001199781,NR_037659,NM_001199782,NR_028138,NM_003774,NM_001199777	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,-,-,-,-,+,-,-	POC1B,POC1B,POC1B-GALNT4,POC1B,POC1B-GALNT4,LOC338758,GALNT4,POC1B	1217,1912,1912,1912,1912,184554,456,1217
chr2:229475600-229476736	chr2	+	229475779	229476585	True	NM_178821,NM_030623	chr2,chr2	+,-	WDR69,SPHKAP	-739503,-429418
chr10:32342574-32343250	chr10	+	32342717	32343299	True	NM_004521,NM_001026383	chr10,chr10	-,+	KIF5B,CCDC7	2124,391741
chr20:59829403-59829608	chr20	+	59829437	59829601	True	NM_001794,NR_031658	chr20,chr20	+,-	CDH4,MIR1257	-1929,699167
chr8:19675285-19675831	chr8	+	19675331	19675819	True	NR_024040,NM_018142	chr8,chr8	-,+	CSGALNACT1,INTS10	-135070,-464
chr4:39460778-39461871	chr4	+	39460876	39461879	True	NM_001024921,NM_194451,NM_000661,NM_006859	chr4,chr4,chr4,chr4	-,+,-,+	RPL9,LIAS,RPL9,LIAS	-669,-266,-308,-266
chr20:3765184-3765679	chr20	+	3765310	3765608	True	NM_001810,NM_015417,NM_004358	chr20,chr20,chr20	-,-,+	CENPB,SPEF1,CDC25B	1779,-3208,10792
chrX:39725859-39726078	chrX	+	39725918	39726116	True	NM_005765,NM_001123385	chrX,chrX	+,-	ATP6AP2,BCOR	714099,230655
chr1:21997241-21997634	chr1	+	21997368	21997634	True	NM_002885,NM_001145657,NM_001013693	chr1,chr1,chr1	-,-,+	RAP1GAP,RAP1GAP,LDLRAD2	-1512,-1512,141123
chr1:151301026-151301228	chr1	+	151301092	151301251	True	NM_002651,NM_001198775,NM_001198774,NM_001198773,NM_020832	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	PI4KB,PI4KB,PI4KB,PI4KB,ZNF687	-959,-959,-901,-959,-46360
chrX:7891884-7892106	chrX	+	7891899	7892148	True	NM_001142389,NM_001172672,NM_013452,NM_004650	chrX,chrX,chrX,chrX	-,-,+,-	PNPLA4,PNPLA4,VCX,PNPLA4	3691,3691,-81647,3386
chr22:41601377-41601890	chr22	+	41601627	41601856	True	NM_138481,NM_031488	chr22,chr22	-,+	CHADL,L3MBTL2	35136,-365
chrX:68836247-68836503	chrX	+	68836309	68836531	True	NM_001002254,NM_001399,NM_001005609,NM_001005610,NM_001005613,NM_001005612	chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,+	AWAT2,EDA,EDA,EDA,EDA,EDA	433307,-449,-449,-449,-449,-449
chr4:122724853-122725201	chr4	+	122724981	122725200	True	NM_005033,NM_001237,NM_001034194	chr4,chr4,chr4	+,-,+	EXOSC9,CCNA2,EXOSC9	-2569,19938,-2569
chr3:112737524-112738053	chr3	+	112737693	112738069	True	NM_015412,NR_027794,NR_027796,NM_138485	chr3,chr3,chr3,chr3	-,-,-,+	C3orf17,C3orf17,C3orf17,GTPBP8	536,536,536,-27944
chr3:183816970-183817222	chr3	+	183817088	183817233	True	NM_182589,NM_001023587	chr3,chr3	+,-	HTR3E,ABCC5	733,-81361
chrX:103040299-103040809	chrX	+	103040330	103040788	True	NM_000533,NM_199478,NM_016370,NM_001128834	chrX,chrX,chrX,chrX	+,+,-,+	PLP1,PLP1,RAB9B,PLP1	-8628,-8628,46474,-8943
chr10:23397045-23397765	chr10	+	23397208	23397813	True	NM_012228,NM_153714	chr10,chr10	+,-	MSRB2,C10orf67	-12832,236009
chr12:54669184-54669636	chr12	+	54669313	54669513	True	NM_002136,NM_012117,NM_031157,NR_002944	chr12,chr12,chr12,chr12	+,-,+,+	HNRNPA1,CBX5,HNRNPA1,HNRNPA1P10	4974,4454,4974,5019
chrX:78622605-78623018	chrX	+	78622690	78622872	True	NM_001171581,NM_004867,NM_032553	chrX,chrX,chrX	-,-,+	ITM2A,ITM2A,GPR174	227,227,-196272
chr5:125694341-125696137	chr5	+	125694388	125696127	True	NM_001146319,NM_001182	chr5,chr5	+,-	GRAMD3,ALDH7A1	62,235005
chr15:72612793-72613206	chr15	+	72612908	72613218	True	NM_052840,NR_027262,NM_001172684	chr15,chr15,chr15	-,+,-	CELF6,C15orf34,CELF6	-383,55235,-621
chrX:48756551-48757247	chrX	+	48756965	48757251	True	NM_001032384,NM_001032381,NM_005834,NM_001032383,NM_001032382,NM_005710,NM_001167947,NM_001167989,NM_001167990,NM_144495,NM_001167992	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,-,+,+,+,-,+,+,+,+	PQBP1,PQBP1,TIMM17B,PQBP1,PQBP1,PQBP1,TIMM17B,PQBP1,PQBP1,PQBP1,PQBP1	-1479,-1823,-1539,-1823,-1823,-1479,-1539,-1823,-1805,-1823,-1243
chr6:40346606-40347816	chr6	+	40346754	40347838	True	NR_024015,NM_020737	chr6,chr6	+,-	TDRG1,LRFN2	-642,207338
chr3:178981206-178981684	chr3	+	178981320	178981521	True	NM_016331,NR_028135,NM_171829,NM_171828,NM_001163677	chr3,chr3,chr3,chr3,chr3	+,-,-,-,-	ZNF639,KCNMB3,KCNMB3,KCNMB3,KCNMB3	60029,-3641,-3641,3368,3368
chr20:31642311-31642844	chr20	+	31642415	31642885	True	NM_182658,NM_080675	chr20,chr20	+,-	C20orf185,SUN5	344,-50176
chr1:165599852-165600194	chr1	+	165599915	165600207	True	NM_004528,NR_026744	chr1,chr1	+,-	MGST3,LOC400794	242,-48574
chr1:6672504-6672833	chr1	+	6672559	6672815	True	NM_014851,NM_153812	chr1,chr1	-,+	KLHL21,PHF13	-9630,940
chr19:43531908-43532336	chr19	+	43531919	43532365	True	NM_203287,NM_002785,NR_036584,NM_001113410	chr19,chr19,chr19,chr19	-,-,+,-	PSG11,PSG11,LOC100289650,PSG11	-1288,-1288,-205955,-1288
chr19:43531908-43532336	chr19	+	43423335	43423385	False	NM_002782,NM_001031850,NR_036584	chr19,chr19,chr19	-,-,+	PSG6,PSG6,LOC100289650	-1346,-1292,-97371
chr22:28295604-28296045	chr22	+	28295603	28295904	True	NR_026962,NM_012399	chr22,chr22	+,-	TTC28-AS1,PITPNB	19459,19410
chr20:58514070-58514700	chr20	+	58514140	58514640	True	NM_022106,NM_014258,NM_001190827,NM_006242,NM_001190826	chr20,chr20,chr20,chr20,chr20	+,-,+,-,+	C20orf177,SYCP2,C20orf177,PPP1R3D,C20orf177	803,-6931,803,762,-5372
chr16:21248629-21249413	chr16	+	21248630	21249206	True	NM_003460,NM_145865	chr16,chr16	-,+	ZP2,ANKS4B	-25762,-3672
chr2:132286306-132286536	chr2	+	132286397	132286491	True	NM_001085365,NM_138770	chr2,chr2	-,+	MZT2A,CCDC74A	-36333,-956
chr14:31926787-31927825	chr14	+	31926819	31927863	True	NM_080664,NM_025152	chr14,chr14	-,+	C14orf126,NUBPL	-139,102727
chr6:123111899-123112929	chr6	+	123111918	123112725	True	NM_006714,NM_020755	chr6,chr6	+,-	SMPDL3A,SERINC1	-2005,-318966
chr22:29604539-29604828	chr22	+	29604542	29604876	True	NM_012265,NM_133455	chr22,chr22	-,+	RHBDD3,EMID1	59088,-2640
chr16:30775668-30775883	chr16	+	30775678	30775926	True	NM_001195620,NM_014771,NM_001014979	chr16,chr16,chr16	-,+,-	C16orf93,RNF40,C16orf93	-2113,-2099,-2113
chr14:23524864-23525673	chr14	+	23525119	23525483	True	NM_144985,NM_022478,NM_001099780	chr14,chr14,chr14	-,-,+	CDH24,CDH24,PSMB11	1314,1314,-13794
chr22:30685640-30685878	chr22	+	30685669	30685897	True	NM_001037666,NM_001017437	chr22,chr22	-,+	GATSL3,CCDC157	-53,66729
chr4:1244022-1244348	chr4	+	1244065	1244383	True	NM_001012614,NR_033339,NM_001328	chr4,chr4,chr4	-,+,-	CTBP1,C4orf42,CTBP1	-1157,-888,-1157
chr1:198626731-198627750	chr1	+	198626848	198627767	True	NM_080921,NM_133326	chr1,chr1	+,-	PTPRC,ATP6V1G3	-18763,-116773
chr1:173836376-173837189	chr1	+	173836675	173837137	True	NR_002746,NM_032522,NR_003944,NR_037605,NR_003942,NR_003943,NR_003940,NR_003941,NR_002750,NM_001122770,NR_002578,NR_002579,NR_003939,NR_003938	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,+,-,+,-,-,-,-,-,+,-,-,-,-	SNORD47,ZBTB37,SNORD78,LOC100506046,SNORD76,SNORD77,SNORD80,SNORD75,SNORD44,ZBTB37,GAS5,SNORD74,SNORD79,SNORD81	-3092,355,-1851,-4340,-822,-1166,-2634,-599,-1509,355,38,-24,-2107,-3320
chr16:30124878-30125485	chr16	+	30125069	30125453	True	NR_027081,NM_024307,NM_002746,NM_001040056,NM_001109891	chr16,chr16,chr16,chr16,chr16	+,-,-,-,-	LOC100271831,GDPD3,MAPK3,MAPK3,MAPK3	-19,-191,9227,9227,9227
chr5:172481558-172482186	chr5	+	172481733	172482216	True	NM_001168393,NR_026682,NM_001168394,NM_153607	chr5,chr5,chr5,chr5	+,-,+,+	C5orf41,LOC100268168,C5orf41,C5orf41	1138,-95362,1138,1138
chr10:69646070-69646720	chr10	+	69646339	69646602	True	NM_201262,NM_001142498,NM_012238	chr10,chr10,chr10	-,+,+	DNAJC12,SIRT1,SIRT1	-48402,-1458,-1970
chr11:32912012-32913002	chr11	+	32912099	32912992	True	NM_001008391,NM_001076786	chr11,chr11	-,+	CCDC73,QSER1	-95912,1799
chr6:117804216-117804486	chr6	+	117804293	117804497	True	NM_173674,NM_002944	chr6,chr6	+,-	DCBLD1,ROS1	-524,-57275
chr18:44527040-44527851	chr18	+	44527105	44527866	True	NM_001100817,NM_031303	chr18,chr18	-,+	TCEB3CL,KATNAL2	16555,-369
chr8:8026312-8028179	chr8	+	8026578	8027619	True	NR_031689,NR_024362	chr8,chr8	-,+	MIR548I3,FLJ10661	-79967,58472
chr8:8026312-8028179	chr8	-	12353074	12354118	False	NR_026789,NM_001137610	chr8,chr8	+,-	FAM66A,FAM86B2	-133604,-59222
chr9:136212399-136212641	chr9	+	136212403	136212585	True	NM_133640,NM_000972,NM_006753,NM_181491,NR_000017,NR_002447,NR_002448,NR_000016	chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,+,-,-,+,+,+,+	MED22,RPL7A,SURF6,MED22,SNORD36B,SNORD24,SNORD36A,SNORD36C	2437,2483,-9356,2437,4363,3665,4725,5115
chr17:74736178-74737724	chr17	+	74736384	74737525	True	NR_036608,NM_003016,NM_024311,NR_030366,NM_001195427	chr17,chr17,chr17,chr17,chr17	-,-,+,-,-	SRSF2,SRSF2,MFSD11,MIR636,SRSF2	-2891,-2891,-2658,-3754,-2891
chr2:187454019-187454412	chr2	+	187454090	187454436	True	NM_002210,NM_001145000,NM_182521	chr2,chr2,chr2	+,+,-	ITGAV,ITGAV,ZSWIM2	353,353,259511
chr12:69005680-69006210	chr12	+	69005808	69006248	True	NM_015646,NM_001010942,NR_033335	chr12,chr12,chr12	+,+,-	RAP1B,RAP1B,SNORA70G	-1214,-1214,14957
chr19:1814569-1814821	chr19	+	1814662	1814841	True	NR_031730,NR_034114,NM_138813,NM_001178002	chr19,chr19,chr19,chr19	-,+,-,-	MIR1909,LOC100288123,ATP8B3,ATP8B3	1446,7246,-2392,-2463
chr20:55101843-55102621	chr20	+	55101990	55102669	True	NM_001012971,NM_080615,NM_001013646	chr20,chr20,chr20	+,-,+	C20orf106,GCNT7,C20orf107	-2257,-1009,5632
chr1:165798008-165798209	chr1	+	165798069	165798149	True	NM_019026,NM_012474	chr1,chr1	-,+	TMCO1,UCK2	-59934,-1388
chr8:22959774-22960094	chr8	+	22960014	22960082	True	NM_003841,NR_027140	chr8,chr8	+,-	TNFRSF10C,TNFRSF10B	244,-33314
chr12:10286842-10288016	chr12	+	10287245	10287656	True	NM_197949,NM_197948,NM_153022,NM_197954,NM_022570,NM_197950,NM_197947	chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,-,+,-,-,-,-	CLEC7A,CLEC7A,C12orf59,CLEC7A,CLEC7A,CLEC7A,CLEC7A	-4377,-4377,43900,-4377,-4377,-4377,-4377
chr11:108421796-108422934	chr11	+	108421810	108422829	True	NM_015065,NM_004398	chr11,chr11	-,+	EXPH5,DDX10	41598,112986
chr19:54135295-54135750	chr19	+	54135299	54135545	True	NM_001012728,NR_002938	chr19,chr19	+,-	DPRX,LOC284379	-40,-28548
chr22:39717074-39717636	chr22	+	39717135	39717394	True	NM_001033853,NM_000967,NR_000028,NR_002439,NR_000026,NR_000027,NM_145731	chr22,chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,-,-,+	RPL3,RPL3,SNORD83B,SNORD43,RNU86,SNORD83A,SYNGR1	-1465,-1465,-7219,-2017,-4234,-5823,28559
chr2:44290289-44291123	chr2	+	44290295	44290633	True	NM_133259,NM_001033556	chr2,chr2	-,+	LRPPRC,PPM1B	-67151,105366
chr5:75378089-75378724	chr5	+	75378163	75378752	True	NM_001099271,NM_014979	chr5,chr5	-,+	POC5,SV2C	-364850,552
chr17:18645348-18646100	chr17	+	18645488	18645904	True	NM_001145045,NM_031456	chr17,chr17	-,+	ZNF286B,FBXW10	-59916,1421
chr17:18645348-18646100	chr17	-	15524486	15524906	False	NM_006382,NM_001130842	chr17,chr17	-,+	CDRT1,ZNF286A	-1468,77984
chr1:44579158-44581045	chr1	+	44579329	44580660	True	NM_001024845,NM_173484	chr1,chr1	-,+	SLC6A9,KLF17	-82195,3861
chr12:55002406-55003928	chr12	+	55002695	55003955	True	NM_001165975,NR_003039	chr12,chr12	+,-	PDE1B,GLYCAM1	-47647,341
chr12:51666298-51667329	chr12	+	51666371	51666480	True	NM_001136269,NM_001033873,NM_001031628	chr12,chr12,chr12	+,-,-	DAZAP2,SMAGP,SMAGP	-33914,-2377,-2169
chr2:97405493-97406903	chr2	+	97405594	97406928	True	NM_020184,NR_024518,NR_024519,NM_001142292,NR_024521,NR_024520,NM_030805	chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-,-	CNNM4,LMAN2L,LMAN2L,LMAN2L,LMAN2L,LMAN2L,LMAN2L	19710,-69,-69,-69,-69,-69,-69
chr9:107266549-107266905	chr9	+	107266606	107266858	True	NM_001004485,NM_001001919	chr9,chr9	+,-	OR13F1,OR13C4	-113,22682
chr5:140568015-140568270	chr5	+	140568064	140568232	True	NM_020957,NM_018930,NM_019119,NM_031947	chr5,chr5,chr5,chr5	+,+,+,-	PCDHB16,PCDHB10,PCDHB9,SLC25A2	-7143,3719,-1230,115430
chr19:50473996-50474560	chr19	+	50474057	50474433	True	NM_001135163,NM_052884,NR_002825	chr19,chr19,chr19	-,-,+	SIGLEC11,SIGLEC11,SIGLEC16	-9628,-9628,-1196
chr19:50473996-50474560	chr19	-	50462824	50463200	False	NM_001135163,NM_052884,NR_002825	chr19,chr19,chr19	-,-,+	SIGLEC11,SIGLEC11,SIGLEC16	1279,1279,9711
chr12:54860721-54861648	chr12	+	54860806	54861513	True	NM_005337,NM_144594	chr12,chr12	+,-	NCKAP1L,GTSF1	29981,5938
chr4:982233-982480	chr4	+	982293	982471	True	NM_022042,NM_000203,NM_134425,NM_213613	chr4,chr4,chr4,chr4	-,+,-,-	SLC26A1,IDUA,SLC26A1,SLC26A1	4762,-1559,4762,4803
chr11:47205949-47206469	chr11	+	47205956	47206308	True	NM_032389,NM_000107,NM_001184974,NM_001184975,NM_016223	chr11,chr11,chr11,chr11,chr11	-,+,-,-,-	ARFGAP2,DDB2,PACSIN3,PACSIN3,PACSIN3	-7537,30184,1752,1174,1752
chr17:43923028-43923467	chr17_ctg5_hap1	-	944035	944469	False	NM_175882,NR_024559	chr17_ctg5_hap1,chr17_ctg5_hap1	-,+	IMP5,LOC100128977	865,-49392
chr17:43923028-43923467	chr17	+	43923070	43923504	True	NM_175882,NR_024559	chr17,chr17	+,-	IMP5,LOC100128977	-865,49425
chr17:26988726-26988944	chr17	+	26988735	26988831	True	NM_006923,NM_003170	chr17,chr17	-,+	SDF2,SUPT6H	152,470
chr5:81569459-81570175	chr5	+	81569532	81570206	True	NM_001017971,NM_001025	chr5,chr5	+,-	ATP6AP1L,RPS23	30959,4079
chr19:3558013-3558290	chr19	+	3558017	3558308	True	NM_001042680,NM_021731,NM_006339,NM_174983	chr19,chr19,chr19,chr19	-,-,+,-	C19orf28,C19orf28,HMG20B,C19orf28	-446,-446,14634,-446
chr20:48808697-48808907	chr20	+	48808815	48808955	True	NR_027889,NM_005194	chr20,chr20	-,+	TMEM189,CEBPB	-38480,-1490
chr19:44038262-44038523	chr19	+	44038274	44038506	True	NM_014297,NM_174945	chr19,chr19	-,+	ETHE1,ZNF575	-6878,-985
chr12:32908205-32908648	chr12	+	32908333	32908697	True	NM_001040436,NM_012063	chr12,chr12	-,+	YARS2,DNM1L	240,-76247
chr11:114274292-114275114	chr11	+	114274518	114275128	True	NM_016090,NM_019021	chr11,chr11	+,-	RBM7,C11orf71	-3188,-3379
chr3:2949179-2950568	chr3	+	2949365	2950547	True	NM_000564,NM_182916	chr3,chr3	-,+	IL5RA,TRNT1	201568,218052
chr9:112212192-112212698	chr9	+	112212191	112212739	True	NM_001145369,NM_001145370,NM_001037293	chr9,chr9,chr9	-,-,+	PTPN3,PTPN3,PALM2	975,975,190328
chr8:23706899-23707952	chr8	+	23706931	23707841	True	NM_003155,NM_016612	chr8,chr8	-,+	STC1,SLC25A37	4529,-320626
chr1:220865271-220866105	chr1	+	220865302	220866028	True	NM_024709,NM_012414	chr1,chr1	+,-	C1orf115,RAB3GAP2	-1725,-419459
chr14:74254243-74254627	chr14	+	74254358	74254652	True	NM_001146154,NM_001043318	chr14,chr14	+,-	PTGR2,C14orf43	63881,-462
chr9:33170261-33170872	chr9	+	33170346	33170886	True	NM_001497,NM_014471	chr9,chr9	-,+	B4GALT1,SPINK4	-2990,69309
chr14:51708617-51709417	chr14	+	51708897	51709309	True	NM_052978,NM_030755	chr14,chr14	-,+	TRIM9,TMX1	-146475,-2076
chr1:154600481-154600691	chr1	+	154600490	154600724	True	NM_000748,NM_001025107	chr1,chr1	+,-	CHRNB2,ADAR	-60286,-34
chr11:1591546-1591876	chr11	+	1591561	1591815	True	NM_004420,NR_021489	chr11,chr11	-,+	DUSP8,LOC338651	1385,2155
chr2:203776671-203776985	chr2	+	203776691	203776971	True	NM_024744,NM_018256,NM_001104586	chr2,chr2,chr2	+,-,+	ALS2CR8,WDR12,ALS2CR8	145,28,6
chr16:57388871-57389678	chr16	+	57388888	57389518	True	NM_015993,NM_002990	chr16,chr16	-,+	PLLP,CCL22	-70304,3176
chr8:130952571-130953084	chr8	+	130952613	130953083	True	NM_016623,NR_031613	chr8,chr8	-,+	FAM49B,MIR1208	-613,-1790302
chr10:63660313-63660572	chr10	+	63660437	63660621	True	NM_032199,NM_145307	chr10,chr10	+,-	ARID5B,RTKN2	391,367895
chr19:14171866-14172635	chr19	+	14171884	14172414	True	NR_024282,NM_001145028	chr19,chr19	+,-	LOC113230,PALM3	11406,-1913
chr1:32673919-32674372	chr1	+	32674239	32674361	True	NM_001160042,NM_018134,NM_001099434,NM_024296,NM_019118	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	IQCC,IQCC,DCDC2B,CCDC28B,TMEM234	-3061,-3061,333,-8095,13615
chr2:105666891-105667273	chr2	+	105666908	105667274	True	NR_037883,NM_182640	chr2,chr2	-,+	LOC100506421,MRPS9	-198974,-12485
chr14:105781796-105782007	chr14	+	105781814	105782056	True	NM_001519,NM_015197,NM_001100913	chr14,chr14,chr14	-,+,+	BRF1,PACS2,PACS2	-14485,-784,-784
chr10:121485946-121486173	chr10	+	121485990	121486221	True	NM_003252,NM_014937,NR_003251	chr10,chr10,chr10	-,+,+	TIAL1,INPP5F,INPP5F	-129449,-432,-432
chr19:12917185-12917389	chr19	+	12917256	12917434	True	NM_005809,NM_181738,NM_006397	chr19,chr19,chr19	-,-,+	PRDX2,PRDX2,RNASEH2A	-4562,-4562,-7
chr4:147558563-147559330	chr4	+	147558638	147559282	True	NM_032128,NM_004575	chr4,chr4	-,+	SLC10A7,POU4F2	-115515,762
chr6:14865917-14866721	chr6	+	14865990	14866574	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	379952,796765
chr19:49495398-49495899	chr19	+	49495535	49495861	True	NM_001161587,NM_006666,NR_027763,NM_002103	chr19,chr19,chr19,chr19	-,+,-,-	GYS1,RUVBL2,GYS1,GYS1	799,1294,799,799
chr1:35660570-35661265	chr1	+	35660889	35661100	True	NM_005066,NM_005095	chr1,chr1	-,+	SFPQ,ZMYM4	-2146,73467
chr8:124897431-124898585	chr8	+	124897452	124898419	True	NM_004306,NM_001039112	chr8,chr8	-,+	ANXA13,FER1L6	-147805,-33283
chrX:153665422-153665634	chrX	+	153665472	153665632	True	NM_001009934,NM_004699,NM_001493,NM_001183	chrX,chrX,chrX,chrX	-,+,+,+	DNASE1L1,FAM50A,GDI1,ATP6AP1	-25045,6852,-264,-8545
chr1:144995748-144997009	chr1	+	144995749	144996822	True	NM_014644,NM_001195260,NM_001195261,NM_004892,NM_001002812,NM_001002810,NM_001198834	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,-,-	PDE4DIP,PDE4DIP,PDE4DIP,SEC22B,PDE4DIP,PDE4DIP,PDE4DIP	-727,348,-667,99584,-727,-716,-716
chr11:63653523-63654422	chr11	+	63654213	63654419	True	NM_017490,NM_173587	chr11,chr11	+,-	MARK2,RCOR2	1567,29947
chr8:11559353-11559664	chr8	+	11559432	11559692	True	NM_002052,NM_001908	chr8,chr8	+,-	GATA4,CTSB	2024,166004
chr11:6219090-6220006	chr11	+	6219117	6219953	True	NM_001005178,NM_173525,NM_001004052	chr11,chr11,chr11	+,+,-	OR52W1,C11orf42,OR52B2	500,6844,-27561
chr11:102322609-102322999	chr11	+	102322748	102323006	True	NM_001166,NM_052932	chr11,chr11	+,-	BIRC2,TMEM123	-104845,819
chr19:55361919-55363480	chr19	+	55362521	55363284	True	NM_006737,NM_001127255	chr19,chr19	+,-	KIR3DL2,NLRP7	-674,95652
chr3:96533766-96534021	chr3	+	96533771	96534065	True	NM_001042533,NM_001080448	chr3,chr3	-,+	MINA,EPHA6	1157209,-397
chr1:220097259-220097894	chr1	+	220097583	220097935	True	NM_018060,NM_018713	chr1,chr1	+,-	IARS2,SLC30A10	169519,4108
chr9:93597674-93598290	chr9	+	93597674	93598193	True	NM_017594,NM_001174167	chr9,chr9	-,+	DIRAS2,SYK	-192566,-8024
chr19:9437024-9438015	chr19	+	9437096	9437815	True	NM_001172650,NM_001202425,NM_032497,NM_198535,NM_001202409,NM_001202408,NM_001202407,NM_001202406,NM_001202410,NM_001202411,NM_001202412	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,-,+,+,+,+,+,+,+	ZNF559-ZNF177,ZNF559-ZNF177,ZNF559,ZNF699,ZNF559,ZNF559,ZNF559,ZNF559,ZNF559,ZNF559,ZNF559	-2258,-1789,-2712,-21301,-2712,-2712,-2712,-2712,-2712,-2712,-2258
chr9:35606075-35606890	chr9	+	35606167	35606845	True	NM_001782,NM_006285	chr9,chr9	-,+	CD72,TESK1	11630,-937
chr5:175305222-175305734	chr5	+	175305296	175305750	True	NM_032361,NM_001008220	chr5,chr5	-,+	THOC3,CPLX2	89845,-6846
chr2:42407034-42408529	chr2	+	42407336	42408275	True	NM_019063,NM_004718	chr2,chr2	+,-	EML4,COX7A2L	-10900,180144
chr10:129692339-129693269	chr10	+	129692350	129693028	True	NM_006504,NM_152311	chr10,chr10	+,-	PTPRE,CLRN3	12296,-1139
chr15:67432916-67433468	chr15	+	67432952	67433498	True	NM_001145103,NM_024666	chr15,chr15	+,-	SMAD3,AAGAB	-2644,113626
chr22:30159136-30160952	chr22	+	30160039	30160999	True	NM_001003692,NM_019103,NM_001003684,NM_013387	chr22,chr22,chr22,chr22	-,-,+,+	ZMAT5,ZMAT5,UQCR10,UQCR10	2020,2020,2358,2358
chr8:143821873-143822991	chr8	+	143822012	143822912	True	NM_016647,NM_020427	chr8,chr8	+,-	C8orf55,SLURP1	-13442,967
chr10:20105023-20105240	chr10	+	20105084	20105286	True	NM_006393,NM_032812	chr10,chr10	-,+	NEBL,PLXDC2	1081295,85
chr10:123923560-123923795	chr10	+	123923561	123923751	True	NM_006997,NM_017615,NM_206860	chr10,chr10,chr10	+,-,+	TACC2,NSMCE4A,TACC2	-507,-188818,-507
chr11:17249914-17250168	chr11	+	17249986	17250152	True	NM_002645,NM_005013	chr11,chr11	-,+	PIK3C2A,NUCB2	-58632,48133
chr11:124631163-124631557	chr11	+	124631222	124631284	True	NM_138961,NM_006176,NM_014312	chr11,chr11,chr11	-,+,-	ESAM,NRGN,VSIG2	989,-21444,-9113
chr16:89238587-89239189	chr16	+	89238790	89239234	True	NM_004933,NM_005187	chr16,chr16	+,-	CDH15,CBFA2T3	-678,-195286
chr1:242160676-242161202	chr1	+	242160864	242161238	True	NM_006027,NM_001004343	chr1,chr1	+,-	EXO1,MAP1LC3C	-148882,1197
chr1:153517150-153518983	chr1	+	153517166	153518490	True	NM_002961,NM_002962,NM_002960,NM_019554,NM_006271,NM_014624	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,+,-	S100A4,S100A5,S100A3,S100A4,S100A1,S100A6	-158,-2925,3294,-158,82382,-8449
chr1:38060704-38061436	chr1	+	38060795	38061425	True	NM_013285,NM_003462	chr1,chr1	-,+	GNL2,DNALI1	211,-38326
chr11:66035475-66035875	chr11	+	66035532	66035858	True	NM_030981,NM_020470,NM_182553	chr11,chr11,chr11	+,-,+	RAB1B,YIF1A,CNIH2	197,20830,9837
chr3:49028193-49029308	chr3	+	49028271	49029147	True	NM_001009996,NM_177938,NM_177939	chr3,chr3,chr3	-,+,+	DALRD3,P4HTM,P4HTM	26920,-981,-981
chr7:134244782-134246252	chr7	+	134245047	134245962	True	NM_001628,NM_001080538	chr7,chr7	-,+	AKR1B1,AKR1B15	-101159,-11249
chr7:74590513-74591695	chr7	+	74590577	74591448	True	NM_001003795,NR_003187	chr7,chr7	+,-	GTF2IRD2B,NCF1C	-82281,-2761
chr7:74590513-74591695	chr7	-	72630974	72631850	False	NR_002164,NR_003186	chr7,chr7	-,+	GTF2IRD2P1,NCF1B	53858,2823
chr7:74590513-74591695	chr7	-	74184679	74185491	False	NM_173537,NM_000265	chr7,chr7	-,+	GTF2IRD2,NCF1	82400,2817
chr10:32392434-32393127	chr10	+	32392744	32393105	True	NM_004521,NM_001026383	chr10,chr10	-,+	KIF5B,CCDC7	-47373,341935
chr9:71321436-71321643	chr9	+	71321450	71321678	True	NM_003558,NM_153237	chr9,chr9	+,-	PIP5K1B,C9orf71	-892,-165667
chr10:114206177-114206504	chr10	+	114206224	114206454	True	NM_022494,NM_145206	chr10,chr10	-,+	ZDHHC6,VTI1A	268,301
chr6:137817174-137818105	chr6	+	137817252	137817928	True	NM_006290,NM_175747	chr6,chr6	+,-	TNFAIP3,OLIG3	370652,-1721
chr17:60554560-60555097	chr7	+	128170149	128170203	True	NM_183243,NM_018396	chr7,chr7	-,+	IMPDH1,METTL2B	-120113,-53421
chrX:12820755-12822350	chrX	+	12820772	12822198	True	NM_002765,NR_030727	chrX,chrX	+,-	PRPS2,LOC349408	-11350,139285
chr3:122571561-122572574	chr3	+	122571608	122572310	True	NM_024610,NR_024618	chr3,chr3	-,+	HSPBAP1,LOC100129550	-58958,33049
chr1:247508007-247508567	chr1	+	247508303	247508545	True	NM_032752,NM_001079821	chr1,chr1	-,+	ZNF496,NLRP3	-13258,70912
chr17:32598267-32599905	chr17	+	32598340	32599923	True	NM_006273,NM_002981	chr17,chr17	+,-	CCL7,CCL1	-1158,90380
chr6:154894739-154895835	chr6	+	154894739	154895215	True	NM_173515,NM_014892	chr6,chr6	-,+	CNKSR3,SCAF8	-62986,159296
chr20:31261199-31261449	chr20	+	31261264	31261448	True	NR_034152,NM_182584	chr20,chr20	+,-	LOC149950,C20orf203	-86034,-21481
chr5:35932858-35933251	chr5	+	35932877	35933267	True	NM_144647,NM_001042625,NM_002185	chr5,chr5,chr5	-,-,+	CAPSL,CAPSL,IL7R	5664,5520,-75938
chr1:85024267-85025159	chr1	+	85024637	85025038	True	NM_004388,NR_036561	chr1,chr1	-,+	CTBS,SPATA1	15178,-52722
chr19:52134890-52135656	chr19	+	52135232	52135702	True	NM_003830,NR_029843	chr19,chr19	-,+	SIGLEC5,MIR99B	-1505,60162
chr16:57654020-57654259	chr16	+	57654116	57654230	True	NM_001145771,NM_001145770,NM_001145773,NM_001145772,NM_033212,NM_201525,NM_201524,NM_005682	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,-,+,+,+	GPR56,GPR56,GPR56,GPR56,CCDC102A,GPR56,GPR56,GPR56	8188,-257,8188,8188,-83639,8188,8188,-257
chr1:155099878-155100100	chr1	+	155099901	155100149	True	NM_004428,NM_018973,NM_018845,NM_001122839,NM_001122837,NM_182685	chr1,chr1,chr1,chr1,chr1,chr1	+,-,+,+,+,+	EFNA1,DPM3,SLC50A1,SLC50A1,SLC50A1,EFNA1	199,12784,8138,8138,8138,199
chr9:978096-978451	chr9	+	978101	978398	True	NM_021240,NM_152569	chr9,chr9	+,-	DMRT3,C9orf66	-1188,-762208
chr20:271881-273162	chr20	+	272162	273145	True	NM_033089,NM_153269	chr20,chr20	+,-	ZCCHC3,C20orf96	5058,-772
chr22:37678536-37678870	chr22	+	37678544	37678918	True	NM_013385,NM_002872	chr22,chr22	+,-	CYTH4,RAC2	-100,-38239
chr1:19229709-19230101	chr1	+	19229722	19230100	True	NM_170726,NM_001135254,NM_003748	chr1,chr1,chr1	-,+,-	ALDH4A1,PAX7,ALDH4A1	-429,-272274,-429
chr15:45421755-45421988	chr15	+	45421771	45422023	True	NM_017434,NM_144565,NM_175940	chr15,chr15,chr15	+,-,+	DUOX1,DUOXA1,DUOX1	168,84,168
chr12:122230151-122230625	chr12	+	122230150	122230524	True	NM_015048,NM_019034	chr12,chr12	+,-	SETD1B,RHOF	12113,1120
chr12:46385543-46385768	chr12	+	46385573	46385719	True	NM_152641,NM_004719	chr12,chr12	+,-	ARID2,SCAF11	-262004,-1172
chr3:42845552-42845764	chr3	+	42845650	42845774	True	NM_001296,NM_001099669,NM_001099668,NM_014056	chr3,chr3,chr3,chr3	+,-,-,-	CCBP2,HIGD1A,HIGD1A,HIGD1A	5189,303,210,303
chr11:4624662-4626270	chr11	+	4624884	4626192	True	NM_018073,NM_001005169	chr11,chr11	-,+	TRIM68,OR52I1	3295,-9666
chr1:53684544-53684792	chr1	+	53684545	53684794	True	NM_000098,NM_017887	chr1,chr1	+,-	CPT2,C1orf123	-22495,1546
chr2:214300598-214301794	chr2	+	214300598	214301564	True	NM_001079526,NM_024532	chr2,chr2	-,+	IKZF2,SPAG16	-284265,-151537
chr17:43391471-43391814	chr17_ctg5_hap1	+	6611	6999	False	NM_001159330,NM_001113738	chr17_ctg5_hap1,chr17_ctg5_hap1	-,+	ARHGAP27,ARL17A	91636,188721
chr17:43391471-43391814	chr17	+	43391475	43391863	True	NM_003954,NR_024435	chr17,chr17	-,+	MAP3K14,LOC100133991	2601,-51979
chr11:60554405-60555210	chr11	+	60554418	60555073	True	NM_206893,NM_004778	chr11,chr11	+,-	MS4A10,GPR44	-1648,68421
chr17:58755429-58757219	chr17	+	58755442	58757119	True	NM_017679,NM_001099432,NM_006380	chr17,chr17,chr17	+,+,-	BCAS3,BCAS3,APPBP2	-321,-321,-151862
chr8:110987590-110987856	chr8	+	110987602	110987904	True	NM_014379,NM_004215	chr8,chr8	-,+	KCNV1,EBAG9	-643,-435344
chrY:6307379-6309099	chrY	+	6307614	6309021	True	NR_003590,NR_001535,NR_001534,NR_003588,NR_003592	chrY,chrY,chrY,chrY,chrY	-,+,+,+,+	TTTY2B,TTTY21,TTTY7,TTTY21B,TTTY7B	-11129,2453,8487,2453,8487
chrY:6307379-6309099	chrY	-	9561358	9562765	False	NR_001536,NR_001535,NR_001534,NR_003588,NR_003592	chrY,chrY,chrY,chrY,chrY	+,-,-,-,-	TTTY2,TTTY21,TTTY7,TTTY21B,TTTY7B	11129,-2453,-8487,-2453,-8487
chr3:156542942-156543831	chr3	+	156543088	156543682	True	NM_001004316,NR_003284,NM_001193283	chr3,chr3,chr3	+,-,+	LEKR1,PA2G4P4,LEKR1	413,-13278,465
chr17:56593622-56594855	chr17	+	56593636	56594668	True	NM_002876,NM_004687	chr17,chr17	+,-	RAD51C,MTMR4	175294,633
chr11:47664328-47664814	chr11	+	47664410	47664565	True	NM_014342,NM_001164379	chr11,chr11	-,+	MTCH2,FAM180B	-204,-56244
chr15:64678932-64679385	chr15	+	64678993	64679418	True	NM_001029989,NM_016213,NM_014736	chr15,chr15,chr15	-,+,-	KIAA0101,TRIP4,KIAA0101	-5291,584,-5291
chr6:74405076-74405396	chr6	+	74405088	74405264	True	NM_001159587,NM_012434,NM_133493,NM_001159588	chr6,chr6,chr6,chr6	+,-,+,+	CD109,SLC17A5,CD109,CD109	243,-41351,249,243
chr14:39571290-39572036	chr14	+	39571550	39571884	True	NM_006364,NM_001009182	chr14,chr14	-,+	SEC23A,SIP1	603,11603
chr11:62600278-62600639	chr11	+	62600351	62600555	True	NM_003164,NM_018093,NM_001012662	chr11,chr11,chr11	-,-,+	STX5,WDR74,SLC3A2	-791,7123,22928
chr7:128114865-128115674	chr7	+	128115075	128115446	True	NM_183243,NM_018396	chr7,chr7	-,+	IMPDH1,METTL2B	-65039,1336
chr20:35203862-35204115	chr20	+	35203911	35204127	True	NM_021809,NM_001199535,NM_032214,NM_001199513,NM_001199514,NM_001199515	chr20,chr20,chr20,chr20,chr20,chr20	+,+,-,+,+,+	TGIF2,TGIF2-C20ORF24,SLA2,TGIF2,TGIF2,TGIF2	-1952,-1005,70481,-2086,-2086,-1005
chr19:51334888-51335226	chr19	+	51334934	51335058	True	NM_138564,NM_001030050,NM_002257,NM_138563,NM_017509	chr19,chr19,chr19,chr19,chr19	-,+,-,-,-	KLK15,KLK3,KLK1,KLK15,KLK15	-155,23112,-7891,-155,-155
chr11:68040503-68040771	chr11	+	68040512	68040812	True	NM_022338,NM_002335	chr11,chr11	-,+	C11orf24,LRP5	-1043,39295
chrX:114250347-114252172	chrX	+	114250745	114252208	True	NM_000640,NM_001145346	chrX,chrX	-,+	IL13RA2,RBMXL3	49,171754
chr6:84230062-84231514	chr6	+	84230223	84231191	True	NM_002395,NM_001170423,NM_153362	chr6,chr6,chr6	-,+,+	ME1,PRSS35,PRSS35	-89285,-8080,-8080
chr14:78085449-78085962	chr14	+	78085448	78085770	True	NM_031210,NM_004863	chr14,chr14	+,-	C14orf156,SPTLC2	88654,-2338
chr6:41706085-41707657	chr6	+	41706779	41707691	True	NM_001167827,NM_007162,NM_013397,NM_001166424,NM_002630	chr6,chr6,chr6,chr6,chr6	-,-,+,-,-	TFEB,TFEB,PRICKLE4,PGC,PGC	-2782,-3981,40808,7498,7498
chr10:30982155-30982394	chr10	+	30982235	30982435	True	NM_183058,NM_005204	chr10,chr10	-,+	LYZL2,MAP3K8	-63588,-259420
chr10:30982155-30982394	chr10	-	29780012	29780193	False	NR_030335,NR_003930	chr10,chr10	-,+	MIR604,LOC387647	54014,-81693
chr17:33416654-33416860	chr17	+	33416665	33416891	True	NM_017559,NR_037713	chr17,chr17	+,-	FNDC8,RFFL	31739,-317
chr17:33700563-33700815	chr17	+	33700630	33700828	True	NM_001104587,NM_001104590,NM_001104589,NM_001104588,NM_144975,NM_152270	chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,+,-	SLFN11,SLFN11,SLFN11,SLFN11,SLFN5,SLFN11	-2,-2,-2,-2,-130595,-2
chr8:11352997-11354475	chr8	+	11353016	11354384	True	NM_001715,NM_053279	chr8,chr8	+,-	BLK,FAM167A	-1546,-28740
chr2:242799597-242799841	chr2	+	242799706	242799800	True	NM_173821	chr2	+	C2orf85	12085
chr17:11946218-11948044	chr17	+	11946761	11947684	True	NM_144680,NM_003010	chr17,chr17	-,+	ZNF18,MAP2K4	-46072,-22677
chr8:1993335-1993985	chr8	+	1993335	1993838	True	NR_033895,NM_003970	chr8,chr8	-,+	LOC286083,MYOM2	-742508,-228
chr1:152284380-152284825	chr1	+	152284411	152284689	True	NM_002016,NM_178438	chr1,chr1	-,+	FLG,LCE5A	13040,198630
chr21:38639274-38639539	chr21	+	38639383	38639505	True	NM_006052,NR_026719	chr21,chr21	-,+	DSCR3,DSCR9	378,-58479
chr2:25263964-25264441	chr2	+	25264138	25264470	True	NM_016544,NM_014971	chr2,chr2	-,+	DNAJC27,EFR3B	-69175,502
chr18:33766329-33766731	chr18	+	33766381	33766681	True	NM_017947,NM_001099406	chr18,chr18	+,-	MOCOS,SLC39A6	798,-57024
chr11:17411018-17411222	chr11	+	17411031	17411223	True	NM_001166290,NM_001202439,NM_000525	chr11,chr11,chr11	-,+,-	KCNJ11,DKFZp686O24166,KCNJ11	-153,-37773,-825
chr4:185651925-185652439	chr4	+	185651960	185652401	True	NM_152683,NM_024629	chr4,chr4	+,-	CCDC111,MLF1IP	-81250,2935
chr4:57769580-57770903	chr4	+	57769618	57770880	True	NM_032313,NM_001193508,NM_005612	chr4,chr4,chr4	-,+,+	C4orf14,REST,REST	73000,4198,3161
chr6:26364277-26365483	chr6	+	26364379	26365322	True	NM_003543,NM_007047,NM_001197248,NM_001197249,NM_001197246,NM_001197247	chr6,chr6,chr6,chr6,chr6,chr6	-,+,+,+,+,+	HIST1H4H,BTN3A2,BTN3A2,BTN3A2,BTN3A2,BTN3A2	-78652,75,147,75,3083,75
chr10:53458488-53458897	chr10	+	53458543	53458844	True	NR_030336,NM_015235	chr10,chr10	+,-	MIR605,CSTF2T	-399261,562
chr13:77587000-77587463	chr13	+	77587173	77587451	True	NM_006493,NM_012158	chr13,chr13	+,-	CLN5,FBXL3	-21165,13930
chr16:55690128-55690376	chr16	+	55690144	55690340	True	NM_001025194,NM_001172501,NM_001043,NM_001172504	chr16,chr16,chr16,chr16	-,+,+,+	CES1,SLC6A2,SLC6A2,SLC6A2	176785,-653,11,215
chr7:156934482-156935447	chr7	+	156934532	156935236	True	NM_005515,NM_014671	chr7,chr7	-,+	MNX1,UBE3C	-131185,-2928
chr2:219090649-219090870	chr2	+	219090648	219090742	True	NM_005731,NM_001087,NM_152862	chr2,chr2,chr2	+,-,+	ARPC2,AAMP,ARPC2	-8579,44209,-8825
chr3:169543283-169544034	chr3	+	169543287	169543809	True	NM_001080460,NM_001172780	chr3,chr3	+,-	LRRIQ4,LRRC34	-3636,-12713
chr11:134200738-134201012	chr11	+	134200834	134201058	True	NM_138342,NM_199298	chr11,chr11	+,-	GLB1L2,THYN1	709,-77574
chr11:17099855-17100106	chr11	+	17099860	17100015	True	NM_005013,NM_001017	chr11,chr11	+,-	NUCB2,RPS13	198270,-640
chr10:5542917-5543207	chr10	+	5543067	5543185	True	NM_017422,NM_005185	chr10,chr10	-,+	CALML5,CALML3	-1534,23738
chr3:21762165-21763514	chr3	+	21762352	21763302	True	NR_002311,NM_024697	chr3,chr3	+,-	VENTXP7,ZNF385D	-315195,29574
chr17:13494521-13495135	chr17	+	13494652	13494910	True	NR_003261,NM_006042	chr17,chr17	+,-	CDRT15P,HS3ST3A1	432904,10389
chr1:17696864-17698022	chr1	+	17696875	17697923	True	NM_001136204,NM_207421	chr1,chr1	-,+	RCC2,PADI6	67184,817
chr1:21619569-21619996	chr1	+	21619568	21619894	True	NM_032264,NM_001113349,NM_001397	chr1,chr1,chr1	+,-,-	NBPF3,ECE1,ECE1	146736,-2802,-2586
chr1:239826418-239826767	chr1	+	239826524	239826802	True	NM_000740,NM_022469	chr1,chr1	+,-	CHRM3,GREM2	-34202,948710
chr1:149221405-149222444	chr1	+	149221404	149222286	True	NM_001024599,NR_027002	chr1,chr1	-,+	HIST2H2BF,LOC388692	176993,57189
chr1:169773914-169774632	chr1	+	169774250	169774600	True	NM_018186,NM_033418	chr1,chr1	+,-	C1orf112,METTL18	-9752,-10219
chr9:33001138-33001618	chr9	+	33001204	33001610	True	NM_001195254,NR_036577,NM_001195252,NM_001195251,NM_001195250,NR_036579,NR_036578,NM_001195248,NM_001195249,NM_175069,NM_001539,NM_175073,NR_036576	chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,-,-,-,-,-,-,-,-,-,+,-,-	APTX,APTX,APTX,APTX,APTX,APTX,APTX,APTX,APTX,APTX,DNAJA1,APTX,APTX	50,79,79,79,79,14,50,79,14,79,23598,79,79
chr11:1329960-1330322	chr11	+	1329966	1330076	True	NM_019009,NR_029409	chr11,chr11	-,+	TOLLIP,LOC255512	866,861
chr13:41633031-41634234	chr13	+	41633327	41634070	True	NM_172373,NM_007187	chr13,chr13	-,+	ELF1,WBP4	-39819,1626
chr20:26091430-26092886	chr20	+	26091576	26092926	True	NR_003678,NR_026713	chr20,chr20	-,+	C20orf191,FAM182A	1805,-56382
chr3:50365230-50365474	chr3	+	50365356	50365504	True	NM_007275,NM_170713,NM_007022,NM_033158,NM_003773	chr3,chr3,chr3,chr3,chr3	-,-,+,-,-	TUSC2,RASSF1,CYB561D2,HYAL2,HYAL2	214,9441,22792,-5075,-5075
chr3:77148268-77148555	chr3	+	77148453	77148552	True	NM_001128929,NM_001128223	chr3,chr3	+,-	ROBO2,ZNF717	-1348,-1314198
chr1:200384028-200386002	chr1	+	200384470	200385809	True	NM_001105517,NM_012482	chr1,chr1	+,-	FAM58B,ZNF281	-201865,-5304
chr2:191520479-191521127	chr2	+	191520526	191521158	True	NM_005966,NM_001142645	chr2,chr2	+,-	NAB1,TMEM194B	-6729,-121058
chr6:131971218-131972105	chr6	+	131971218	131971981	True	NM_004830,NM_005021	chr6,chr6	-,+	MED23,ENPP3	-21855,-12827
chr17:18127045-18127815	chr17	+	18127640	18127728	True	NM_004140,NM_002018	chr17,chr17	+,-	LLGL1,FLII	1207,34377
chr2:108990414-108991772	chr2	+	108990694	108991823	True	NR_024439,NM_006588	chr2,chr2	-,+	LOC729121,SULT1C4	-548111,2597
chr1:151779783-151781729	chr1	+	151780136	151781547	True	NR_024237,NM_001004432	chr1,chr1	+,-	LOC100132111,LINGO4	29397,-2254
chr2:241568472-241568878	chr2	+	241568550	241568888	True	NM_005301,NM_001102467	chr2,chr2	+,-	GPR35,AQP12B	-3939,53479
chr1:205410560-205411008	chr1	+	205410659	205410916	True	NM_002596,NR_029893	chr1,chr1	+,-	CDK18,MIR135B	62767,6661
chr7:138715295-138717292	chr7	+	138715626	138717081	True	NM_001144920,NM_080660	chr7,chr7	+,-	TTC26,ZC3HAV1L	101408,3751
chr22:30116876-30117089	chr22	+	30116912	30116974	True	NM_001003692,NM_182527	chr22,chr22	-,+	ZMAT5,CABP7	46045,-619
chr14:20021719-20022457	chr22	+	16289784	16289834	True	NR_001591,NM_001136213	chr22,chr22	+,-	psiTPTE22,POTEH	792966,-1847
chr14:20021719-20022457	chr14	+	20021958	20022223	False	NM_001145442,NM_172194	chr14,chr14	-,+	POTEM,OR4Q3	-1686,193363
chr1:149822403-149822758	chr1	+	149822407	149822701	True	NR_036461,NM_001040874,NM_021059,NM_003516,NM_001005464	chr1,chr1,chr1,chr1,chr1	-,+,+,+,+	HIST2H2BC,HIST2H2AA4,HIST2H3C,HIST2H2AA3,HIST2H3A	-67,22,1479,22,1479
chr1:149822403-149822758	chr1	-	149814244	149814538	False	NR_036461,NM_001040874,NM_021059,NM_003516,NM_001005464	chr1,chr1,chr1,chr1,chr1	-,-,-,-,-	HIST2H2BC,HIST2H2AA4,HIST2H3C,HIST2H2AA3,HIST2H3A	7852,-22,-1479,-22,-1479
chr7:28319587-28319839	chr7	+	28319644	28319850	True	NM_182899,NM_175061	chr7,chr7	+,-	CREB5,JAZF1	19089,-99207
chr3:184039371-184040337	chr3	+	184039436	184040324	True	NM_004953,NM_198244,NM_198242,NM_198241,NM_001194946,NM_001194947,NM_001171087,NR_003055,NM_182917	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,+,+,-,+,+	EIF4G1,EIF4G1,EIF4G1,EIF4G1,EIF4G1,EIF4G1,CLCN2,SNORD66,EIF4G1	-1386,-7204,-7204,-7204,-7204,-7204,39117,3159,-6535
chrX:18239741-18241049	chrX	+	18239741	18240771	True	NM_153346,NM_001184767,NM_003159	chrX,chrX,chrX	-,-,+	BEND2,BEND2,CDKL5	-717,-717,202953
chr17:48911793-48912286	chr17	+	48911828	48912330	True	NM_005749,NM_175575	chr17,chr17	-,+	TOB1,WFIKKN2	29133,274
chr19:54692285-54692520	chr19	+	54692313	54692515	True	NM_001146056,NM_001146082,NM_001146083,NM_024075,NM_024298,NM_001077446	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,+,-,+	MBOAT7,MBOAT7,MBOAT7,TSEN34,MBOAT7,TSEN34	1268,1268,1268,1603,1268,2588
chr3:57994294-57994596	chr3	+	57994345	57994595	True	NM_001164317,NM_001457,NM_004944,NM_001164318,NM_001164319	chr3,chr3,chr3,chr3,chr3	+,+,-,+,+	FLNB,FLNB,DNASE1L3,FLNB,FLNB	-269,-269,205853,-269,-269
chr13:27749915-27750579	chr13	+	27750159	27750439	True	NM_000982,NM_182488	chr13,chr13	+,-	RPL21,USP12	75252,-4126
chr17:54990686-54991100	chr17	+	54990770	54991148	True	NM_021626,NM_005082	chr17,chr17	+,-	SCPEP1,TRIM25	64319,311
chr11:119069224-119069535	chr11	+	119069258	119069528	True	NM_001145018,NM_005188	chr11,chr11	-,+	CCDC153,CBL	-2674,7461
chr1:160989307-160990383	chr1	+	160989460	160990394	True	NR_033385,NM_016946	chr1,chr1	+,-	KLHDC9,F11R	77756,789
chr9:132386624-132388343	chr9	+	132386714	132387876	True	NM_199350,NM_014064	chr9,chr9	-,+	C9orf50,METTL11A	-3659,558
chr5:782910-783229	chr5	+	783018	783272	True	NM_001166260,NM_024786	chr5,chr5	+,-	TRIP13,ZDHHC11	109696,67879
chr5:782910-783229	chr5	+	690959	691189	False	NM_018140,NM_007030	chr5,chr5	+,-	CEP72,TPPP	-78618,2371
chr20:61640688-61641073	chr20	+	61641006	61641098	True	NM_080606,NR_033370	chr20,chr20	-,+	BHLHE23,LOC63930	-2619,-322
chr8:48923201-48923987	chr8	+	48923628	48923756	True	NM_003350,NM_006904	chr8,chr8	+,-	UBE2V2,PRKDC	-2691,-50885
chr11:18273715-18274018	chr11	+	18273922	18273989	True	NM_001127380,NM_001199744,NM_030754,NM_000331	chr11,chr11,chr11,chr11	-,-,-,+	SAA2,SAA2-SAA4,SAA2,SAA1	-3701,-3701,-3701,13818
chr19:39343504-39343809	chr19	+	39343528	39343806	True	NM_001001716,NM_001533,NM_001005335	chr19,chr19,chr19	+,-,-	NFKBIB,HNRNPL,HNRNPL	46808,-2911,-549
chr2:9343840-9345193	chr2	+	9343976	9345085	True	NM_003887,NM_001135191,NM_138799	chr2,chr2,chr2	+,+,-	ASAP2,ASAP2,MBOAT2	1808,1808,-200100
chr7:54613050-54614051	chr7	+	54613538	54614032	True	NM_182546,NM_001012456	chr7,chr7	+,-	VSTM2A,SEC61G	-3570,212957
chr11:108092816-108093188	chr11	+	108092857	108093234	True	NM_000051,NM_002519	chr11,chr11	+,-	ATM,NPAT	324,181
chr18:24748197-24749728	chr18	+	24748332	24749165	True	NR_026908,NM_031422	chr18,chr18	+,-	C18orf16,CHST9	-303118,16188
chr8:30602247-30603356	chr8	+	30602328	30603191	True	NM_005671,NM_001195104	chr8,chr8	+,-	UBXN8,GSR	-689,-16842
chr7:64989500-64990609	chr7	+	64990068	64990608	True	NM_000181,NR_027392	chr7,chr7	-,+	GUSB,INTS4L2	456743,122168
chr7:64989500-64990609	chr7	-	64630672	64631212	False	NR_027393,NM_001007253	chr7,chr7	+,-	INTS4L1,ERV3	-29120,-163548
chr7:64989500-64990609	chr7	-	65141879	65142419	False	NM_000181,NR_027392	chr7,chr7	-,+	GUSB,INTS4L2	304944,-29153
chr7:64989500-64990609	chr11	+	77649227	77649763	False	NM_024684,NM_033547	chr11,chr11	+,-	C11orf67,INTS4	-117082,56004
chr11:71814438-71816189	chr11	+	71814460	71816148	True	NM_014042,NR_026886,NM_017907	chr11,chr11,chr11	-,+,-	C11orf51,LRTOMT,LAMTOR1	7724,-22818,-27
chr21:46339684-46340374	chr21	+	46339927	46340313	True	NM_058190,NM_000211,NM_001127491	chr21,chr21,chr21	+,-,-	C21orf70,ITGB2,ITGB2	19641,702,8490
chr15:65281469-65281699	chr15	+	65281496	65281621	True	NM_001127890,NM_178859,NM_001127889,NM_016630	chr15,chr15,chr15,chr15	-,+,-,-	SPG21,OSTBETA,SPG21,SPG21	687,56086,248,687
chr1:160255629-160255982	chr1	+	160255662	160256016	True	NR_036492,NR_002190,NM_002857,NM_001193644,NR_036493	chr1,chr1,chr1,chr1,chr1	-,+,-,-,-	PEX19,SUMO1P3,PEX19,PEX19,PEX19	-721,31038,-721,-721,-721
chr5:36904493-36905936	chr5	+	36904714	36905545	True	NM_133433,NM_023073	chr5,chr5	+,-	NIPBL,C5orf42	-27904,344045
chr9:100281655-100283473	chr9	+	100281854	100283512	True	NM_139246,NM_003275	chr9,chr9	-,+	TSTD2,TMOD1	112508,-17984
chr8:143762482-143763317	chr8	+	143762536	143763172	True	NM_003724,NM_005672	chr8,chr8	-,+	JRK,PSCA	-11135,-713
chr20:54966681-54967432	chr20	+	54966896	54967402	True	NM_003600,NM_198433,NM_198434,NM_198435,NM_198436,NM_198437,NM_001033522,NM_001033521,NM_001324	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	-,-,-,-,-,-,+,+,+	AURKA,AURKA,AURKA,AURKA,AURKA,AURKA,CSTF1,CSTF1,CSTF1	-1,-1,-1,-1,-1,-1,304,24,171
chr8:133885764-133886135	chr8	+	133885764	133886096	True	NM_003235,NM_144649	chr8,chr8	+,-	TG,TMEM71	-6611,-112850
chr15:69222466-69222672	chr15	+	69222524	69222638	True	NR_033672,NM_145658,NM_001184780,NR_033671,NM_006305	chr15,chr15,chr15,chr15,chr15	+,+,+,+,-	NOX5,SPESP1,NOX5,NOX5,ANP32A	200,200,200,225,-109263
chr2:106812813-106813419	chr2	+	106812819	106813199	True	NM_025076,NM_032411	chr2,chr2	-,+	UXS1,C2orf40	-2024,-130757
chr8:22785401-22785710	chr8	+	22785413	22785597	True	NM_144962,NM_001160036	chr8,chr8	-,+	PEBP4,RHOBTB2	8,59332
chr4:184832853-184833842	chr4	+	184832868	184833861	True	NM_020225,NM_152682	chr4,chr4	+,-	STOX2,RWDD4	-6411,-252537
chr11:45827401-45828078	chr11	+	45827485	45827981	True	NM_018389,NM_001145266,NM_001145265,NM_001080446	chr11,chr11,chr11,chr11	+,+,+,-	SLC35C1,SLC35C1,SLC35C1,C11orf94	-895,-1913,-1913,100902
chr6:57181133-57181439	chr6	+	57181281	57181467	True	NM_016277,NM_000947	chr6,chr6	-,+	RAB23,PRIM2	-94203,954
chr12:119745701-119746131	chr12	+	119745730	119746044	True	NR_024246,NM_178499	chr12,chr12	-,+	LOC144742,CCDC60	-4545,26472
chr10:7756293-7756929	chr10	+	7756425	7756950	True	NM_001001851,NM_002216	chr10,chr10	-,+	ITIH5,ITIH2	-47464,-11240
chr5:173126205-173127499	chr5	+	173126218	173127298	True	NR_027109,NM_138369	chr5,chr5	+,-	LOC285593,BOD1	-119612,-82552
chr1:213224343-213224565	chr1	+	213224347	213224433	True	NM_012424,NM_144567,NM_001136138	chr1,chr1,chr1	+,-,+	RPS6KC1,ANGEL2,RPS6KC1	154,-35179,154
chr9:46119080-46120861	chr9	+	46119393	46120536	True	NM_001145196,NR_024060	chr9,chr9	-,+	FAM75A6,FAM27A	-2488663,-392424
chr9:46119080-46120861	chr9	-	46383776	46383829	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2753046,303736
chr14:75899107-75899369	chr14	+	75899158	75899346	True	NM_130469,NM_001135049,NM_001135048,NM_007176,NM_001135047	chr14,chr14,chr14,chr14,chr14	+,+,+,-,+	JDP2,JDP2,JDP2,C14orf1,JDP2	-4149,-372,-4289,228242,-4700
chr13:104160233-104161732	chr13	+	104161388	104161772	True	NR_026965,NM_000452	chr13,chr13	+,-	LOC121952,SLC10A2	-628996,-442192
chr1:161495188-161495399	chr1	+	161495294	161495380	True	NM_000569,NM_002155	chr1,chr1	-,+	FCGR3A,HSPA6	24488,-1309
chr18:35144982-35145248	chr18	+	35145060	35145262	True	NM_020180,NM_001025088,NM_001025089,NM_001025087,NR_036202	chr18,chr18,chr18,chr18,chr18	-,-,-,-,+	CELF4,CELF4,CELF4,CELF4,MIR4318	788,788,788,788,91835
chr14:74704114-74705903	chr14	+	74704288	74705622	True	NM_182894,NM_005050	chr14,chr14	+,-	VSX2,ABCD4	552,64195
chr1:224547556-224548863	chr1	+	224547949	224548748	True	NM_014184,NM_206840	chr1,chr1	+,-	CNIH4,NVL	-3413,-30077
chr16:74641324-74643313	chr16	+	74641368	74643053	True	NM_002811,NM_001145667,NR_027265,NM_001145666,NR_027264,NM_012201	chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,-,-,-	PSMD7,GLG1,GLG1,GLG1,GLG1,GLG1	-310746,-326,-326,-326,-326,-326
chr4:5710448-5710676	chr4	+	5710447	5710590	True	NM_147127,NM_001166136,NM_153717	chr4,chr4,chr4	-,-,+	EVC2,EVC2,EVC	-153,735,2333
chr6:163149354-163149826	chr6	+	163149379	163149803	True	NM_152410,NM_004562,NM_013987,NM_001080379,NM_001080378,NM_013988	chr6,chr6,chr6,chr6,chr6,chr6	+,-,-,+,+,-	PACRG,PARK2,PARK2,PACRG,PACRG,PARK2	-1273,-545,-545,-435,-1273,-545
chr10:29115186-29115429	chr10	+	29115246	29115388	True	NR_033805,NM_012342	chr10,chr10	-,+	LOC220906,BAMBI	-293963,-148881
chr2:73460653-73461182	chr2	+	73460662	73461154	True	NM_001009570,NM_006429,NM_001166284,NM_001166285,NR_029403,NR_029402,NM_032319	chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,+,+,-	CCT7,CCT7,CCT7,CCT7,CCT7,CCT7,C2orf7	209,209,209,209,209,209,-306
chr19:15490443-15490780	chr19	+	15490515	15490753	True	NM_005858,NR_031716	chr19,chr19	-,+	AKAP8,MIR1470	-4,69605
chr1:21979548-21980437	chr1	+	21979579	21980388	True	NM_001177520,NM_001145658	chr1,chr1	+,-	ALPL,RAP1GAP	-143772,-1231
chr13:24737135-24738835	chr13	+	24737174	24738748	True	NM_153023,NR_031753,NM_001166271,NM_001007537	chr13,chr13,chr13,chr13	+,+,+,-	SPATA13,MIR2276,SPATA13,C1QTNF9B	-2364,-670,-2364,-266049
chr10:76969787-76970227	chr10	+	76969881	76970227	True	NM_001184783,NM_001184823,NM_144589,NM_003375,NR_033675	chr10,chr10,chr10,chr10,chr10	+,+,-,+,+	VDAC2,VDAC2,COMTD1,VDAC2,VDAC2	72,-20,25593,72,72
chr13:103400050-103401344	chr13	+	103400060	103401180	True	NM_001159596,NM_001146197	chr13,chr13	+,-	BIVM,C13orf40	50218,10300
chr1:26696081-26696833	chr1	+	26696505	26696755	True	NM_001114759,NM_024674,NM_173574	chr1,chr1,chr1	-,+,-	ZNF683,LIN28A,ZNF683	2561,40513,2561
chr14:58617288-58617560	chr14	+	58617329	58617592	True	NM_018477,NM_001001872	chr14,chr14	+,-	ACTR10,C14orf37	49240,1306
chr19:41107892-41108421	chr19	+	41107926	41108334	True	NM_001042544,NM_001042545,NM_004756,NM_003573	chr19,chr19,chr19,chr19	+,+,-,+	LTBP4,LTBP4,NUMBL,LTBP4	-4836,-700,88272,-8905
chr1:33547398-33547624	chr1	+	33547495	33547643	True	NR_037592,NM_052998	chr1,chr1	-,+	AK2,ADC	-44983,-839
chr19:58571060-58571273	chr19	+	58571064	58571180	True	NM_001164530,NM_001145543,NM_007134,NM_003436,NM_001164529,NM_001164527	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+	ZNF135,ZSCAN18,ZNF135,ZNF135,ZNF135,ZNF135	-508,38600,-508,-508,-508,-508
chr5:147438104-147438549	chr5	+	147438137	147438603	True	NM_001127698,NM_001127699,NM_206966,NM_006846	chr5,chr5,chr5,chr5	+,+,-,+	SPINK5,SPINK5,C5orf46,SPINK5	4931,4931,-152036,4931
chr1:110949166-110949977	chr1	+	110949535	110949962	True	NM_032414,NM_006402	chr1,chr1	+,-	PROK1,HBXIP	43825,634
chr9:110059294-110059780	chr9	+	110059534	110059619	True	NM_004235,NM_002874	chr9,chr9	-,+	KLF4,RAD23B	192489,-14051
chr14:70234588-70234864	chr14	+	70234705	70234909	True	NM_001039465,NR_029378,NM_006925	chr14,chr14,chr14	+,-,+	SRSF5,LOC100289511,SRSF5	-927,-275,-922
chr4:144255215-144255510	chr4	+	144255326	144255386	True	NM_001168235,NM_207123,NM_002039	chr4,chr4,chr4	-,+,+	FREM3,GAB1,GAB1	366492,2596,2596
chr2:163174656-163174976	chr2	+	163174756	163174960	True	NM_022168,NM_012198	chr2,chr2	-,+	IFIH1,GCA	129,25622
chr4:165864728-165865286	chr4	+	165864730	165865024	True	NM_153027,NM_001012414	chr4,chr4	+,-	C4orf39,TRIM61	13075,33846
chr8:144296371-144296855	chr8	+	144296623	144296815	True	NM_178172,NM_001130478	chr8,chr8	+,-	GPIHBP1,LY6H	-1606,-54570
chr7:1017196-1017544	chr7	+	1017287	1017560	True	NM_001031617,NM_017781	chr7,chr7	-,+	COX19,CYP2W1	-2052,5274
chr4:102269193-102269682	chr4	+	102269356	102269434	True	NM_001130692,NM_000944,NM_001130691,NR_033874	chr4,chr4,chr4,chr4	-,-,-,+	PPP3CA,PPP3CA,PPP3CA,FLJ20021	-728,-728,-728,-473
chr19:10714171-10715610	chr19	+	10714581	10715512	True	NM_001145056,NM_005498	chr19,chr19	+,-	SLC44A2,AP1M2	-1518,-16590
chr19:35489298-35489630	chr19	+	35489539	35489665	True	NM_175872,NM_001136199,NM_020895	chr19,chr19,chr19	-,+,+	ZNF792,GRAMD1A,GRAMD1A	-34586,1580,1580
chr1:4042580-4043111	chr1	+	4042579	4043153	True	NR_024455,NM_207356	chr1,chr1	+,-	LOC100133612,C1orf174	-225662,-225722
chr4:15781246-15782585	chr4	+	15781266	15782456	True	NR_036464,NM_001775	chr4,chr4	-,+	FBXL5,CD38	-124231,-1392
chr15:83675425-83676707	chr15	+	83675619	83676207	True	NR_027649,NM_031452,NR_027650,NM_001160114,NM_001160115,NM_001160116,NM_001160113,NM_144597	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,+,-,-,-,-,-,-	C15orf40,FAM103A1,C15orf40,C15orf40,C15orf40,C15orf40,C15orf40,C15orf40	4236,-20675,4236,4236,4236,4236,4236,4236
chr8:20112208-20112467	chr8	+	20112212	20112516	True	NM_021020,NM_001693	chr8,chr8	-,+	LZTS1,ATP6V1B2	337,-57559
chrX:100879386-100880265	chrX	+	100879398	100880206	True	NM_019007,NM_001009584,NM_001184768,NR_033670,NM_016607,NM_177948,NM_177947,NR_033669	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,+,+,+,-	ARMCX6,ARMCX6,ARMCX6,ARMCX6,ARMCX3,ARMCX3,ARMCX3,ARMCX6	-6407,-6407,-6407,-6407,-1329,-1098,-1329,-6407
chr17:41046965-41047774	chr17	+	41047126	41047634	True	NM_000151,NR_027254	chr17,chr17	+,-	G6PC,LOC388387	5180,3173
chr4:44725854-44727317	chr4	+	44725976	44727322	True	NM_138335,NM_021927	chr4,chr4	-,+	GNPDA2,GUF1	1340,-45594
chr7:73147318-73147848	chr7	+	73147381	73147457	True	NM_148912,NM_148913,NR_026910,NR_026912,NR_026690,NM_001145364	chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,+,-	ABHD11,ABHD11,ABHD11,ABHD11,WBSCR26,ABHD11	5777,5777,5777,5783,1941,5777
chr20:23333976-23335771	chr20	+	23334273	23335647	True	NM_013248,NM_022482,NM_022080	chr20,chr20,chr20	+,+,-	NXT1,GZF1,NAPB	-2951,9373,66559
chr12:53691104-53692774	chr12	+	53691234	53692591	True	NM_021640,NM_002624,NM_001173466,NM_145897	chr12,chr12,chr12,chr12	+,+,-,+	C12orf10,PFDN5,AAAS,PFDN5	878,-2057,22872,-2057
chr5:133341351-133341588	chr5	+	133341385	133341559	True	NR_036625,NR_036624,NM_003374,NM_003202	chr5,chr5,chr5,chr5	-,-,-,+	VDAC1,VDAC1,VDAC1,TCF7	-728,-728,-561,108842
chr19:42193272-42194980	chr19	+	42193808	42194736	True	NM_004363,NM_006890	chr19,chr19	+,-	CEACAM5,CEACAM7	17793,-1712
chr10:98587656-98588022	chr10	+	98587662	98587925	True	NM_032440,NM_001170766,NM_152309,NM_001170765	chr10,chr10,chr10,chr10	+,+,-,+	LCOR,LCOR,PIK3AP1,LCOR	4786,4091,-107383,4091
chr2:20847631-20848774	chr2	+	20847688	20848772	True	NM_022460,NM_182828	chr2,chr2	-,+	HS1BP3,GDF7	2142,17651
chr22:42466272-42466499	chr22	+	42466309	42466541	True	NM_000262,NM_001002034,NM_033318	chr22,chr22,chr22	-,+,+	NAGA,FAM109B,C22orf32	355,3713,9157
chr6:14675635-14676792	chr6	+	14675769	14676639	True	NM_001031713,NM_004233	chr6,chr6	-,+	CCDC90A,CD83	-860980,-557955
chr15:65336994-65337551	chr15	+	65337137	65337591	True	NM_178859,NM_139242	chr15,chr15	+,-	OSTBETA,MTFMT	116,-15160
chr6:100911123-100911893	chr6	+	100911188	100911886	True	NM_021620,NM_005068	chr6,chr6	+,-	PRDM13,SIM1	-856589,-15
chr7:151041189-151041555	chr7	+	151041294	151041362	True	NM_198285,NM_016118	chr7,chr7	-,+	WDR86,NUB1	65820,-2494
chr2:147347345-147347855	chr2	+	147347658	147347729	True	NM_001190882,NR_026904	chr2,chr2	-,+	ORC4,PABPC1P2	1430628,-3097
chr8:21882860-21883067	chr8	+	21882932	21883114	True	NM_024815,NM_182795	chr8,chr8	-,+	NUDT18,NPM2	83868,-629
chrX:69673803-69674124	chrX	+	69673804	69674098	True	NM_020730,NM_016484,NM_021120,NM_001166278	chrX,chrX,chrX,chrX	+,-,+,+	DLG3,PDZD11,DLG3,DLG3	-1707,-164006,-9157,847
chr1:155532546-155532921	chr1	+	155532545	155532960	True	NR_027023,NM_018489	chr1,chr1	+,-	LOC645676,ASH1L	-824,-221
chr17:2208391-2209331	chr17	+	2208393	2209337	True	NM_021947,NM_017575,NM_001170957	chr17,chr17,chr17	+,-,-	SRR,SMG6,SMG6	-1205,-1324,-1580
chr17:46704594-46705134	chr17	+	46704597	46705125	True	NM_024017,NR_033205,NR_029582	chr17,chr17,chr17	-,+,-	HOXB9,LOC404266,MIR196A1	-762,-31332,4854
chr3:14581794-14582438	chr3	+	14582123	14582445	True	NM_016474,NM_001080423	chr3,chr3	+,-	C3orf19,GRIP2	110807,1193
chr19:49116304-49116558	chr19	+	49116316	49116558	True	NM_001204159,NM_001204158,NM_000979,NM_017708,NM_133498,NM_020126	chr19,chr19,chr19,chr19,chr19,chr19	+,+,-,-,+,+	SPHK2,SPHK2,RPL18,FAM83E,SPACA4,SPHK2	6232,5989,5925,186,-6367,5989
chr6:109415941-109416178	chr6	+	109415943	109416051	True	NM_014454,NM_001083535	chr6,chr6	-,+	SESN1,CEP57L1	-235,304
chr22:24129963-24130354	chr22	+	24130017	24130225	True	NM_213720,NM_003073,NM_001007468	chr22,chr22,chr22	-,+,+	CHCHD10,SMARCB1,SMARCB1	-19876,-921,-921
chrX:130956293-130956799	chrX	+	130956340	130956831	True	NM_001042453,NR_026975	chrX,chrX	+,-	MST4,LOC286467	200413,7891
chr6:41176583-41177739	chr6	+	41176701	41177686	True	NM_024807,NM_198153,NR_027256	chr6,chr6,chr6	-,+,-	TREML2,TREML4,TREML3	-7776,18375,8052
chr9:131036814-131037746	chr9	+	131036815	131037615	True	NM_004486,NM_001040011	chr9,chr9	-,+	GOLGA2,C9orf119	703,809
chr19:31636107-31636444	chr19	+	31636106	31636466	True	NM_020856,NR_026894	chr19,chr19	-,+	TSHZ3,DKFZp566F0947	203774,4316
chr8:26239141-26240372	chr8	+	26239399	26240408	True	NM_007257,NM_004331	chr8,chr8	-,+	PNMA2,BNIP3L	131125,114
chr3:52813049-52813624	chr3	+	52813139	52813616	True	NM_003157,NM_001166436,NM_001166435,NM_001166434,NM_001193533,NM_002215	chr3,chr3,chr3,chr3,chr3,chr3	-,+,+,+,-,+	NEK4,ITIH1,ITIH1,ITIH1,NEK4,ITIH1	-8174,320,320,-667,-8174,-1582
chr19:16435836-16436051	chr19	+	16436029	16436097	True	NM_021235,NM_016270	chr19,chr19	-,+	EPS15L1,KLF2	146715,-429
chr17:78120559-78121201	chr17	+	78120672	78121225	True	NM_024110,NM_014740	chr17,chr17	+,-	CARD14,EIF4A3	31055,46
chr17:4902424-4902687	chr17	+	4902496	4902664	True	NM_001167986,NM_001167987,NM_006612,NM_001167985,NM_213726	chr17,chr17,chr17,chr17,chr17	-,-,+,-,-	INCA1,INCA1,KIF1C,INCA1,INCA1	-1591,-1591,-1304,-1591,-1591
chr11:107478674-107479217	chr11	+	107478941	107479237	True	NM_138775,NR_028328	chr11,chr11	-,+	ALKBH8,LOC643923	-42480,-16521
chr1:209937806-209938326	chr1	+	209938202	209938270	True	NM_152485,NM_025228	chr1,chr1	-,+	C1orf74,TRAF3IP3	19670,-8868
chr10:13543287-13543769	chr10	+	13543422	13543507	True	NM_003675,NM_152751,NM_001100912	chr10,chr10,chr10	+,-,-	PRPF18,BEND7,BEND7	85431,1532,1532
chr2:218620862-218621318	chr2	+	218620864	218621205	True	NR_034176,NR_026597	chr2,chr2	+,-	RUFY4,DIRC3	278451,161
chr15:40674898-40675128	chr15	+	40674897	40675143	True	NM_001142762,NM_001142761,NM_207380,NM_033286	chr15,chr15,chr15,chr15	+,+,-,+	C15orf23,C15orf23,C15orf52,C15orf23	-26,-26,-41729,-26
chr12:54446798-54447036	chr12	+	54446889	54447019	True	NM_153633,NR_026655,NR_026658	chr12,chr12,chr12	+,+,-	HOXC4,FLJ12825,LOC100240735	641,5018,28638
chrX:151937786-151938081	chrX	+	151937855	151938127	True	NM_001129826,NM_005362	chrX,chrX	+,-	CSAG3,MAGEA3	-10095,163
chrX:151937786-151938081	chrX	-	151867342	151867614	False	NM_001129826,NM_005363,NM_175868	chrX,chrX,chrX	-,+,+	CSAG3,MAGEA6,MAGEA6	10106,-148,-148
chr5:141309246-141309528	chr5	+	141309357	141309515	True	NM_016580,NM_014773,NM_001142603	chr5,chr5,chr5	-,+,+	PCDH12,KIAA0141,KIAA0141	29162,-6023,-6023
chr6:18160202-18160739	chr6	+	18160248	18160606	True	NM_000367,NM_153042	chr6,chr6	-,+	TPMT,KDM1B	-4874,-4687
chr13:21478158-21478389	chr13	+	21478314	21478418	True	NM_022459,NM_138284	chr13,chr13	-,+	XPO4,IL17D	-1401,-200893
chr11:62558531-62558979	chr11	+	62558545	62558739	True	NM_199337,NM_001080501	chr11,chr11	+,-	TMEM179B,TMEM223	-3722,797
chr17:48639448-48639725	chr17	+	48639604	48639746	True	NM_198377,NM_198376,NM_001267,NM_198396,NM_198384,NM_198379,NM_198378,NM_198386,NM_198387,NM_198397,NM_198385,NM_198382,NM_198383,NM_198380,NM_018896,NM_198388	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,-,+,+,+,+,+,+,+,+,+,+,+,+,+	CACNA1G,CACNA1G,CHAD,CACNA1G,CACNA1G,CACNA1G,CACNA1G,CACNA1G,CACNA1G,CACNA1G,CACNA1G,CACNA1G,CACNA1G,CACNA1G,CACNA1G,CACNA1G	-1206,-1206,-93377,-1206,-1206,-1206,-1206,-1206,-1206,-1206,-1206,-1206,-1206,-1206,-1206,-1206
chr19:49223292-49223502	chr19	+	49223291	49223517	True	NM_001130915,NM_001097638,NM_182574	chr19,chr19,chr19	-,+,-	MAMSTR,FUT2,MAMSTR	-315,-24114,-3077
chr15:45149646-45150816	chr15	+	45150682	45150752	True	NM_001145112,NM_152448	chr15,chr15	-,+	PATL2,C15orf43	-181596,98150
chr2:137780904-137782533	chr2	+	137780948	137782446	True	NM_001080427,NM_003467	chr2,chr2	+,-	THSD7B,CXCR4	-32537,-905223
chr6:4892042-4892308	chr6	+	4892063	4892347	True	NM_001143971,NM_006638	chr6,chr6	+,-	CDYL,RPP40	-1888,111974
chr3:52737362-52738194	chr3	+	52737469	52737956	True	NM_001010983,NM_152932,NM_014041,NM_018446	chr3,chr3,chr3,chr3	-,-,+,-	GLT8D1,GLT8D1,SPCS1,GLT8D1	2151,41,1900,2151
chr16:72199948-72201072	chr16	+	72199948	72201045	True	NM_001160213,NM_031293,NM_014003	chr16,chr16,chr16	-,-,+	PMFBP1,PMFBP1,DHX38	5361,5076,-72391
chr1:111968103-111968569	chr1	+	111968241	111968550	True	NM_001688,NM_002557	chr1,chr1	+,-	ATP5F1,OVGP1	23192,1900
chrX:134304573-134304932	chrX	+	134304600	134304932	True	NM_001031705,NM_017863,NM_001078171	chrX,chrX,chrX	-,-,+	CXorf48,CXorf48,FAM127A	869,869,-138325
chr11:4621892-4622392	chr11	+	4621900	4622432	True	NM_018073,NM_001005169	chr11,chr11	-,+	TRIM68,OR52I1	7055,-6682
chr11:64578323-64579177	chr11	+	64578326	64578578	True	NM_004579,NM_006244,NM_130799,NM_000244,NM_130804,NM_130803,NM_130802,NM_130801,NM_130800	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,+,-,-,-,-,-,-,-	MAP4K2,PPP2R5B,MEN1,MEN1,MEN1,MEN1,MEN1,MEN1,MEN1	-7613,113564,-138,-138,238,238,-113,-291,-291
chr15:90294012-90294276	chr15	+	90294018	90294158	True	NM_018670,NM_001039958	chr15,chr15	-,+	MESP1,MESP2	432,25430
chr2:131975999-131977232	chr2	+	131976072	131976676	True	NM_001009993,NM_001083538	chr2,chr2	-,+	FAM168B,POTEE	-125068,-199
chr2:131975999-131977232	chr2	-	130877387	130878163	False	NM_001099771,NR_033903	chr2,chr2	-,+	POTEF,LOC285103	8854,9032
chr10:120818707-120820316	chr10	+	120818706	120820333	True	NR_002917,NM_199461	chr10,chr10	-,+	SNORA19,NANOS1	302,-29529
chr16:85831165-85831556	chr16	+	85831182	85831606	True	NM_001142288,NM_001861,NM_006067	chr16,chr16,chr16	-,+,-	COX4NB,COX4I1,COX4NB	1594,1566,1594
chr1:151044241-151044742	chr1	+	151044304	151044712	True	NM_144618,NM_020239	chr1,chr1	+,-	GABPB2,CDC42SE1	-1283,-12179
chr9:36076127-36077933	chr9	+	36076142	36077793	True	NM_021111,NM_019897	chr9,chr9	+,-	RECK,OR2S2	-39283,-117991
chr6:27107000-27107287	chr6	+	27107004	27107288	True	NM_021064,NM_003495,NM_080593,NM_080596,NM_021058,NR_036096	chr6,chr6,chr6,chr6,chr6,chr6	+,+,-,+,-,+	HIST1H2AG,HIST1H4I,HIST1H2BK,HIST1H2AH,HIST1H2BJ,MIR3143	-6238,5,7399,7619,-6429,8116
chr3:10149272-10149804	chr3	+	10149305	10149623	True	NM_173472,NM_018462,NM_001164839	chr3,chr3,chr3	-,+,-	C3orf24,C3orf10,C3orf24	342,7709,342
chr14:103525376-103525944	chr14	+	103525424	103525709	True	NM_001077594,NM_006035	chr14,chr14	+,-	EXOC3L4,CDC42BPB	40771,-1682
chr10:6317443-6317676	chr10	+	6317447	6317592	True	NM_004566,NM_000417	chr10,chr10	+,-	PFKFB3,IL2RA	-72658,-213114
chr21:15052997-15053476	chr18	-	14474249	14474818	False	NR_024076,NR_026756	chr18,chr18	-,+	CXADRP3,LOC284233	23937,-137117
chr21:15052997-15053476	chr21	+	15053129	15053469	True	NR_026755,NM_174981	chr21,chr21	-,+	C21orf15,POTED	167266,-70682
chr17:7156171-7156583	chr17	+	7156260	7156631	True	NM_015343,NM_001307,NM_203415,NM_203414,NM_203413,NM_001185023,NM_015362,NM_001143775,NM_001185022	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,+,+,-,+,-,-	CTDNEP1,CLDN7,C17orf81,C17orf81,C17orf81,CLDN7,C17orf81,CTDNEP1,CLDN7	-1001,9684,-940,-761,-761,9684,-761,-1265,9932
chr1:114448342-114448769	chr1	+	114448521	114448662	True	NM_022836,NM_006594	chr1,chr1	+,-	DCLRE1B,AP4B1	-663,-780
chr19:17500986-17501301	chr19	+	17501008	17501230	True	NM_138401,NM_031310	chr19,chr19	+,-	FAM125A,PLVAP	29681,-12871
chr18:47088598-47088957	chr18	+	47088679	47088891	True	NM_001035006,NM_006033	chr18,chr18	-,+	RPL17,LIPG	-69744,-303
chr11:821320-821667	chr11	+	821361	821687	True	NM_145887,NR_002585,NM_020376,NM_173584	chr11,chr11,chr11,chr11	-,+,+,+	LRDD,SNORA52,PNPLA2,EFCAB4A	-16111,-9731,-2511,5897
chr11:18130343-18130924	chr11	+	18130533	18130608	True	NR_026576,NM_138421,NM_054031	chr11,chr11,chr11	-,-,+	SAA3P,SAAL1,MRGPRX3	7134,-2895,11893
chr6:34101881-34102164	chr6	+	34101964	34102180	True	NM_002131,NM_000841	chr6,chr6	+,-	HMGA1,GRM4	102396,-521
chr12:110337164-110337758	chr12	+	110337451	110337521	True	NM_032300,NM_016433,NM_001143852	chr12,chr12,chr12	+,-,+	TCHP,GLTP,TCHP	801,-19158,557
chr10:103578447-103579559	chr10	+	103578568	103579346	True	NR_036114,NM_012215,NM_001142434	chr10,chr10,chr10	+,-,-	MIR3158-1,MGEA5,MGEA5	-217445,-346,-346
chr18:9618427-9620278	chr18	+	9618501	9620080	True	NM_006868,NM_005134,NM_001042388	chr18,chr18,chr18	+,-,-	RAB31,PPP4R1,PPP4R1	88147,-3901,-3901
chr7:134916183-134916395	chr7	+	134916183	134916383	True	NM_014149,NM_182489	chr7,chr7	-,+	WDR91,STRA8	-19867,347
chr10:114132147-114133125	chr10	+	114132488	114132712	True	NM_016234,NR_028134,NM_203380,NM_203379	chr10,chr10,chr10,chr10	+,-,+,+	ACSL5,GUCY2GP,ACSL5,ACSL5	3243,-16135,2310,1203
chr1:201617578-201617884	chr1	+	201617748	201617842	True	NM_020443,NM_004078	chr1,chr1	+,-	NAV1,CSRP1	-349,-141361
chr14:90083920-90084632	chr14	+	90083985	90084553	True	NR_024620,NM_001085471	chr14,chr14	+,-	PRO1768,FOXN3	-41489,991
chr6:53407729-53408961	chr6	+	53407842	53408998	True	NM_018214,NM_001498,NM_001197115	chr6,chr6,chr6	+,-,-	LRRC1,GCLC,GCLC	250779,979,979
chr16:2016365-2017405	chr16	+	2016758	2017438	True	NR_003142,NM_174903,NM_002952,NR_002327,NR_002326,NM_006453,NR_003020,NM_004548	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,-,-,-,+,+,+	SNHG9,RNF151,RPS2,SNORA10,SNORA64,TBL3,SNORA78,NDUFB10	-1812,42,-1931,-4291,-3651,4625,-1624,-7292
chr1:2160464-2161011	chr1	+	2160496	2161000	True	NM_001146310,NM_003036	chr1,chr1	-,+	C1orf86,SKI	-21324,-413
chr8:145651885-145652300	chr8	+	145651935	145652333	True	NM_130849,NM_145754,NM_183057,NM_016208	chr8,chr8,chr8,chr8	-,+,-,-	SLC39A4,KIFC2,VPS28,VPS28	-9662,39404,1644,1644
chr9:108209803-108210084	chr9	+	108209826	108210087	True	NM_001145313,NM_031919,NM_207647,NM_005502	chr9,chr9,chr9,chr9	+,+,+,-	FSD1L,FSD1L,FSD1L,ABCA1	227,227,237,-519299
chr1:15272080-15272329	chr1	+	15272087	15272325	True	NM_001017999,NR_027136	chr1,chr1	+,-	KAZN,C1orf126	89,206685
chr6:42535321-42536322	chr6	+	42535459	42536090	True	NM_015255,NM_001184801,NM_033502	chr6,chr6,chr6	+,+,-	UBR2,UBR2,TRERF1	-3753,-3753,-115676
chr9:115652809-115653054	chr9	+	115652872	115653070	True	NM_001012994,NM_033051	chr9,chr9	+,-	SNX30,SLC46A2	-139789,173
chr11:55759844-55761661	chr11	+	55759854	55761646	True	NM_003697,NM_001001921,NR_027688	chr11,chr11,chr11	-,+,-	OR5F1,OR5AS1,OR7E5P	505,36248,-5973
chr19:45004793-45005227	chr19	+	45004964	45005103	True	NM_001205280,NM_013256	chr19,chr19	+,-	LOC147710,ZNF180	111836,-390
chr2:133175387-133175900	chr2	+	133175416	133175900	True	NM_001508,NR_027020	chr2,chr2	+,-	GPR39,ANKRD30BL	-1320,-159874
chr15:33601143-33602815	chr15	+	33601433	33602515	True	NM_001036,NM_001103184	chr15,chr15	+,-	RYR3,FMN1	661,-241348
chrX:40131266-40131489	chrX	+	40131358	40131536	True	NM_001123384,NM_005765	chrX,chrX	-,+	BCOR,ATP6AP2	-94776,308679
chr10:35931296-35931541	chr10	+	35931356	35931442	True	NM_153368,NM_031866	chr10,chr10	+,-	GJD4,FZD8	-37069,-994
chr1:247579532-247580308	chr1	+	247579570	247580348	True	NM_183395,NM_001079821,NM_004895,NM_001127461,NM_001004492,NM_001127462	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,-,+	NLRP3,NLRP3,NLRP3,NLRP3,OR2B11,NLRP3	1002,-163,1002,-163,34986,1002
chr10:79491618-79492156	chr10	+	79491675	79492084	True	NR_024585,NM_002247	chr10,chr10	+,-	LOC100128292,KCNMA1	194485,-94098
chr2:58477829-58478583	chr2	+	58477891	58478586	True	NM_001114636,NM_001130481,NM_018062	chr2,chr2,chr2	-,+,-	FANCL,VRK2,FANCL	-9376,-204095,-9376
chr5:150948276-150949998	chr5	+	150948311	150950034	True	NM_001447,NM_078483	chr5,chr5	-,+	FAT2,SLC36A1	90,-121200
chr8:74792533-74793253	chr8	+	74792536	74792952	True	NM_001001481,NM_018299,NM_001040613	chr8,chr8,chr8	-,-,+	UBE2W,UBE2W,TMEM70	-1426,-1426,95424
chr11:64547644-64548531	chr11	+	64547776	64548336	True	NM_001178030,NM_001178031,NM_004630,NM_201997,NM_006244,NM_201995,NR_033649,NM_201998,NR_033650	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,+,-,-,-,-	SF1,SF1,SF1,SF1,PPP2R5B,SF1,SF1,SF1,SF1	-1838,-2544,-1460,-1460,143806,-1460,-1460,-1460,-1460
chr1:40626330-40626937	chr1	+	40626613	40626933	True	NM_001142604,NM_012421	chr1,chr1	-,+	PPT1,RLF	-63471,107
chr3:35705235-35706083	chr3	+	35705298	35706132	True	NM_001025068,NM_033403	chr3,chr3	+,-	ARPP21,DCLK3	14983,1075270
chr2:101090549-101092181	chr2	+	101090714	101091960	True	NM_004854,NM_001011717	chr2,chr2	-,+	CHST10,NMS	-56584,-3821
chr3:15884955-15885749	chr3	+	15885327	15885728	True	NM_015199,NR_030289	chr3,chr3	-,+	ANKRD28,MIR563	15387,29549
chr9:35414045-35416015	chr9	+	35414454	35415668	True	NM_001099951,NR_003582,NR_003581	chr9,chr9,chr9	-,+,+	FAM166B,ATP8B5P,ATP8B5P	148278,-7753,-7740
chr2:85840557-85841491	chr2	+	85840638	85841263	True	NM_006590,NM_001013649	chr2,chr2	+,-	USP39,C2orf68	2019,-1459
chr3:124303619-124304301	chr3	+	124303662	124304338	True	NM_007064,NM_002213	chr3,chr3	+,-	KALRN,ITGB5	-207,301856
chr20:48743571-48744747	chr20	+	48743765	48744673	True	NM_005194,NM_199144	chr20,chr20	+,-	CEBPB,UBE2V1	62702,-11271
chr19:50887896-50888508	chr19	+	50888010	50888461	True	NM_007121,NM_002691,NM_004851	chr19,chr19,chr19	+,+,-	NR1H2,POLD1,NAPSA	-8376,-468,-19079
chr12:12877549-12877836	chr12	+	12877582	12877738	True	NM_001130415,NM_006143,NM_004064	chr12,chr12,chr12	+,-,+	APOLD1,GPR19,CDKN1B	1112,-28461,-7331
chr11:1038239-1038463	chr11	+	1038309	1038447	True	NM_002457,NM_005961	chr11,chr11	+,-	MUC2,MUC6	36427,-1603
chr19:47924074-47924411	chr19	+	47924079	47924429	True	NM_001009813,NM_014681,NM_020160	chr19,chr19,chr19	-,+,-	MEIS3,DHX34,MEIS3	-1294,-71592,-1294
chr19:12946736-12947154	chr19	+	12946886	12947074	True	NM_001080997,NM_014975,NM_031429	chr19,chr19,chr19	-,+,-	RTBDN,MAST1,RTBDN	-5679,2184,-656
chr15:35050711-35052000	chr15	+	35050838	35052015	True	NM_175741,NM_020660	chr15,chr15	+,-	C15orf55,GJD2	-412823,-4149
chr6:150286149-150286490	chr6	+	150286197	150286487	True	NR_024045,NM_025218	chr6,chr6	-,+	RAET1K,ULBP1	39843,-1105
chr7:150446866-150447487	chr7	+	150446866	150447508	True	NM_001162367,NM_001101311	chr7,chr7	+,-	LOC100128542,TMEM176B	-93,50163
chr2:241569866-241570339	chr2	+	241569866	241570320	True	NM_005301,NM_001102467	chr2,chr2	+,-	GPR35,AQP12B	-5255,52047
chr3:129157699-129158342	chr3	+	129157870	129158313	True	NM_052985,NM_018262,NM_003925,NM_052990,NM_052989	chr3,chr3,chr3,chr3,chr3	+,+,-,+,+	IFT122,IFT122,MBD4,IFT122,IFT122	654,654,589,654,654
chr12:58018660-58019318	chr12	+	58018678	58019336	True	NM_001478,NM_133489	chr12,chr12	-,+	B4GALNT1,SLC26A10	7699,-5036
chr12:110907209-110907473	chr12	+	110907224	110907288	True	NM_013300,NM_016301,NM_001164372,NM_001164373	chr12,chr12,chr12,chr12	+,-,-,-	C12orf24,GPN3,GPN3,GPN3	-1043,-1135,-698,-1135
chr2:135021886-135022609	chr2	+	135021972	135022656	True	NM_002410,NM_030923	chr2,chr2	+,-	MGAT5,TMEM163	-10193,453965
chr2:97302860-97303349	chr2	+	97302887	97303339	True	NM_017991,NM_001113382,NM_001115016	chr2,chr2,chr2	-,+,-	KIAA1310,FER1L5,KIAA1310	833,5234,833
chr9:38068172-38068470	chr9	+	38068211	38068451	True	NM_003028,NM_024345	chr9,chr9	-,+	SHB,DCAF10	809,-267472
chr10:74033596-74033927	chr10	+	74033607	74033951	True	NM_001198800,NM_019058	chr10,chr10	-,+	ASCC1,DDIT4	-57424,19
chrX:151612052-151613253	chrX	+	151612054	151613085	True	NM_000808,NM_018558	chrX,chrX	-,+	GABRA3,GABRQ	6797,193551
chr18:21085319-21085734	chr18	+	21085374	21085734	True	NM_013326,NM_032933	chr18,chr18	+,-	C18orf8,C18orf45	-1963,-67449
chr19:11451908-11452822	chr19	+	11452026	11452456	True	NM_001080503,NM_001145416,NM_033408,NM_004283,NM_198536	chr19,chr19,chr19,chr19,chr19	+,-,-,-,-	CCDC159,TMEM205,TMEM205,RAB3D,TMEM205	4724,4575,4575,-1682,4575
chr11:94136537-94137574	chr11	+	94136537	94137623	True	NM_017704,NM_016540	chr11,chr11	+,-	ANKRD49,GPR83	89529,-1952
chr2:132288850-132289198	chr2	+	132288895	132289235	True	NM_001085365,NM_138770	chr2,chr2	-,+	MZT2A,CCDC74A	-38831,-3454
chr2:132288850-132289198	chr2	-	130898870	130899174	False	NM_207310,NR_033903	chr2,chr2	-,+	CCDC74B,LOC285103	3507,-11725
chr9:95528274-95528704	chr9	+	95528445	95528735	True	NR_026868,NM_015250,NM_001003800	chr9,chr9,chr9	+,-,-	ANKRD19,BICD2,BICD2	43157,-1362,-1362
chr19:1028243-1028461	chr19	+	1028339	1028485	True	NM_004368,NM_033420,NM_001033026,NM_201277	chr19,chr19,chr19,chr19	+,-,-,+	CNN2,C19orf6,C19orf6,CNN2	-2092,-7198,-7198,-2092
chr1:43640409-43642003	chr1	+	43640788	43642043	True	NM_001159936,NM_001167965,NM_001167966,NR_030778,NM_152498,NM_006824	chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,+,+,-	EBNA1BP2,WDR65,WDR65,WDR65,WDR65,EBNA1BP2	-2547,-2851,-2837,-2851,-2851,-2802
chr15:71439065-71440516	chr15	+	71439232	71440387	True	NM_024817,NM_001102658	chr15,chr15	+,-	THSD4,CT62	-5495,-31393
chr10:35892407-35893790	chr10	+	35892891	35893770	True	NM_153368,NM_031866	chr10,chr10	+,-	GJD4,FZD8	567,36642
chr1:11360556-11361200	chr1	+	11360878	11361086	True	NM_004958,NM_013319	chr1,chr1	-,+	MTOR,UBIAD1	-38270,-27682
chrX:23686032-23687133	chrX	+	23686172	23686944	True	NM_006406,NM_001033583	chrX,chrX	+,-	PRDX4,ACOT9	-578,74519
chr8:114447525-114447869	chr8	+	114447569	114447917	True	NR_031745,NM_052900,NM_198123	chr8,chr8,chr8	+,-,-	MIR2053,CSMD3,CSMD3	-791898,1375,1375
chr15:76018627-76019248	chr15	+	76018638	76018942	True	NM_175881,NR_024595,NM_001897	chr15,chr15,chr15	+,-,-	ODF3L1,DNM1P35,CSPG4	-2370,13610,-13449
chr2:230136908-230137960	chr2	+	230136991	230137999	True	NM_174899,NM_001100818,NM_017933	chr2,chr2,chr2	+,-,-	FBXO36,PID1,PID1	649207,-934,-934
chr16:57769994-57770221	chr16	+	57770010	57770176	True	NM_001130099,NM_005886	chr16,chr16	-,+	KIFC3,KATNB1	61803,-401
chr19:17637044-17637738	chr19	+	17637130	17637676	True	NM_001098524,NM_173544,NM_138454	chr19,chr19,chr19	+,+,-	FAM129C,FAM129C,NXNL1	-3074,-3074,-65405
chr17:31258641-31259209	chr17	+	31258729	31259059	True	NM_001033504,NM_015544,NM_015194	chr17,chr17,chr17	+,+,-	TMEM98,TMEM98,MYO1D	-3852,-3852,-54827
chr10:135186507-135186782	chr10	+	135186669	135186781	True	NM_207127,NM_152911,NM_004092,NR_037509,NM_207128	chr10,chr10,chr10,chr10,chr10	+,+,-,-,+	PAOX,PAOX,ECHS1,MIR3944,PAOX	5959,5959,177,-1502,5959
chr1:18805907-18806852	chr1	+	18805940	18806720	True	NM_152375,NM_152232	chr1,chr1	+,-	KLHDC7A,TAS1R2	703,379485
chr1:247578838-247579532	chr1	+	247578934	247579486	True	NM_183395,NM_001079821,NM_004895,NM_001127461,NM_001004492,NM_001127462	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,-,+	NLRP3,NLRP3,NLRP3,NLRP3,OR2B11,NLRP3	1864,-29,1864,-29,35848,1864
chr12:27635527-27636778	chr12	+	27635557	27636815	True	NM_001145010,NM_001146221	chr12,chr12	+,-	C12orf70,LOC100287284	-15873,287444
chr22:36814702-36815300	chr22	+	36814864	36815289	True	NM_145343,NM_002473	chr22,chr22	+,-	APOL1,MYH9	-165798,-30801
chr10:85938811-85940173	chr10	+	85938994	85939488	True	NM_001017924,NM_207373	chr10,chr10	-,+	LRIT2,C10orf99	45854,-5491
chr15:49451489-49452781	chr15	+	49452052	49452773	True	NM_001001556,NM_001143887,NR_036507,NM_004236,NM_002044	chr15,chr15,chr15,chr15,chr15	+,-,+,-,+	GALK2,COPS2,LOC100306975,COPS2,GALK2	-4134,-4198,-3615,-4198,9648
chr10:45799450-45799744	chr10	+	45799580	45799784	True	NM_001004297,NM_000698	chr10,chr10	-,+	OR13A1,ALOX5	11322,69844
chr4:128703453-128703971	chr4	+	128703595	128703906	True	NM_014278,NM_152778	chr4,chr4	+,-	HSPA4L,MFSD8	-193,183283
chr7:6010427-6010708	chr7	+	6010453	6010632	True	NM_006303,NM_173565,NM_001099697	chr7,chr7,chr7	+,-,-	AIMP2,RSPH10B,RSPH10B2	38249,-139,-139
chr7:6010427-6010708	chr7	-	6793421	6793600	False	NM_173565,NM_016265,NM_001099697	chr7,chr7,chr7	+,-,+	RSPH10B,ZNF12,RSPH10B2	139,-46855,139
chr8:23261864-23262359	chr8	+	23261911	23262341	True	NM_001136108,NM_002318	chr8,chr8	+,-	R3HCC1,LOXL2	-116350,-189
chr14:39872045-39873621	chr14	+	39872119	39873520	True	NM_203355,NM_203301	chr14,chr14	+,-	CTAGE5,FBXO33	-135848,28234
chr1:13717588-13719558	chr1	+	13717731	13719002	True	NM_001099850,NM_001099851	chr1,chr1	-,+	PRAMEF18,PRAMEF17	-19326,-1694
chr1:13717588-13719558	chr1	+	13496897	13498168	False	NM_001045480,NM_001099850	chr1,chr1	+,-	PRAMEF16,PRAMEF18	-1694,-19328
chr5:178054576-178055486	chr5	+	178054625	178055531	True	NM_020666,NM_058230	chr5,chr5	-,+	CLK4,ZNF354B	-571,231422
chr2:149898027-149898549	chr2	+	149898049	149898532	True	NM_015702,NM_177964	chr2,chr2	-,+	MMADHC,LYPD6B	545855,-3119
chr9:35563596-35563831	chr9	+	35563598	35563820	True	NM_001099951,NM_001135999,NM_001164310	chr9,chr9,chr9	-,+,-	FAM166B,RUSC2,FAM166B	126,-25020,126
chr3:180318140-180318397	chr3	+	180318161	180318325	True	NM_001042601,NM_133462,NM_181426	chr3,chr3,chr3	+,+,-	TTC14,TTC14,CCDC39	1592,1592,79014
chr1:151255784-151257376	chr1	+	151256092	151257211	True	NM_020832,NM_001198773	chr1,chr1	+,-	ZNF687,PI4KB	-1352,42982
chr15:65480195-65480963	chr15	+	65480373	65480938	True	NM_001101362,NM_006660	chr15,chr15	+,-	KBTBD13,CLPX	-111270,-2810
chr22:21638495-21638767	chr22	+	21638495	21638805	True	NR_003700,NR_024583	chr22,chr22	-,+	PI4KAP2,POM121L8P	233025,-1832
chr22:21638495-21638767	chr22	+	18835774	18836147	False	NM_005675,NR_003267	chr22,chr22	+,-	DGCR6,GGT3P	57588,-56300
chr22:21638495-21638767	chr22	-	21480289	21480599	False	NR_037566,NR_002829	chr22,chr22	+,-	BCRP2,P2RX6P	-23035,-81751
chr17:67323459-67324862	chr17	+	67323596	67324877	True	NM_172232,NM_002758	chr17,chr17	-,+	ABCA5,MAP2K6	-273,85960
chr17:36906859-36907312	chr17	+	36906898	36907351	True	NM_007144,NM_002795	chr17,chr17	-,+	PCGF2,PSMB3	-2340,1650
chr1:39325737-39326765	chr1	+	39325887	39326729	True	NM_001136275,NM_022157	chr1,chr1	+,-	AKIRIN1,RRAGC	130186,-547
chr14:99945985-99946222	chr14	+	99945988	99946202	True	NM_032233,NM_001099402,NM_199123	chr14,chr14,chr14	-,+,-	SETD3,CCNK,SETD3	1074,1536,1074
chr8:17744189-17744662	chr8	+	17744341	17744711	True	NM_006197,NM_201552,NM_201553,NM_147203,NM_004467	chr8,chr8,chr8,chr8,chr8	+,-,-,-,-	PCM1,FGL1,FGL1,FGL1,FGL1	35654,8386,8252,8252,8386
chr12:31799335-31800186	chr12	+	31799913	31800227	True	NM_001135864,NM_144973	chr12,chr12	+,-	METTL20,DENND5B	-3,-55961
chr20:23345908-23346315	chr20	+	23345955	23346219	True	NM_022482,NM_022080	chr20,chr20	+,-	GZF1,NAPB	-986,55987
chr1:47182507-47183705	chr1	+	47182589	47183609	True	NM_014774,NM_001145474	chr1,chr1	-,+	KIAA0494,C1orf223	1177,-45147
chr1:53663168-53663404	chr1	+	53663167	53663429	True	NM_017887,NM_000098	chr1,chr1	-,+	C1orf123,CPT2	22910,-1119
chr12:8395359-8395564	chr12	+	8395464	8395532	True	NR_024254,NR_026788	chr12,chr12	-,+	LOC653113,FAM66C	60,-62710
chr17:34343504-34344868	chr17	+	34344131	34344785	True	NM_002988,NM_005064,NM_145898	chr17,chr17,chr17	+,-,-	CCL18,CCL23,CCL23	46857,270,270
chr20:42217729-42218489	chr20	+	42217730	42218302	True	NM_016004,NM_001008901	chr20,chr20	+,-	IFT52,GTSF1L	1276,137390
chr1:26483305-26483821	chr1	+	26483469	26483863	True	NM_024869,NM_032588	chr1,chr1	+,-	GRRP1,TRIM63	1647,-89348
chr12:104684189-104684830	chr12	+	104684606	104684730	True	NM_006166,NM_003330,NM_182743,NM_182729,NM_182742	chr12,chr12,chr12,chr12,chr12	-,+,+,+,+	NFYB,TXNRD1,TXNRD1,TXNRD1,TXNRD1	-152566,-3938,-3938,-3938,-3938
chr9:110070590-110071932	chr9	+	110070932	110071820	True	NM_004235,NM_002874	chr9,chr9	-,+	KLF4,RAD23B	180278,-25446
chr8:143998586-143998916	chr8	+	143998585	143998823	True	NM_000498,NM_002066	chr8,chr8	-,+	CYP11B2,GML	486,-82419
chr3:4535816-4536472	chr3	+	4535866	4536484	True	NM_001099952,NM_001168272,NM_002222,NM_182760	chr3,chr3,chr3,chr3	+,+,+,-	ITPR1,ITPR1,ITPR1,SUMF1	-885,-885,-885,-26900
chr3:100053886-100054569	chr3	+	100053917	100054543	True	NM_020202,NM_014820	chr3,chr3	+,-	NIT2,TOMM70A	-406,65732
chrX:95942529-95944247	chrX	+	95942928	95944244	True	NM_007309,NR_003539,NM_006729	chrX,chrX,chrX	+,-,+	DIAPH2,LOC643486,DIAPH2	-3329,-350027,-3329
chr3:135915881-135916087	chr3	+	135915890	135916112	True	NM_000532,NM_001145417,NM_018133	chr3,chr3,chr3	+,-,-	PCCB,MSL2,MSL2	53054,-2580,-1202
chr19:41276624-41277582	chr19	+	41276724	41277626	True	NR_037791,NM_198476,NM_006533,NR_037775,NM_001202553,NM_016154	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+	RAB4B-EGLN2,C19orf54,MIA,MIA-RAB4B,MIA,RAB4B	6497,-20896,3655,3815,3455,6497
chr22:29732716-29733736	chr22	+	29732951	29733369	True	NR_037426,NR_003686,NM_152237	chr22,chr22,chr22	-,-,+	MIR3653,SNORD125,GAS2L1	-3695,-3704,-30005
chr1:68912518-68913264	chr1	+	68912596	68913254	True	NM_000329,NM_001924	chr1,chr1	-,+	RPE65,GADD45A	2440,-761787
chr7:151724188-151724734	chr7	+	151724392	151724734	True	NM_022087,NM_016203	chr7,chr7	+,-	GALNT11,PRKAG2	-1681,-150076
chr1:36770205-36771304	chr1	+	36770259	36771259	True	NM_024676,NM_001162530,NM_018166	chr1,chr1,chr1	+,+,-	SH3D21,SH3D21,FAM176B	1448,734,18546
chr18:77748227-77748458	chr18	+	77748236	77748332	True	NM_001136180,NM_006701	chr18,chr18	+,-	HSBP1L1,TXNL4A	-23705,250
chr8:20111960-20112208	chr8	+	20112020	20112206	True	NM_021020,NM_001693	chr8,chr8	-,+	LZTS1,ATP6V1B2	647,-57367
chr13:25340259-25341221	chr13	+	25340680	25341202	True	NM_018451,NM_001184993,NM_031277	chr13,chr13,chr13	-,+,+	CENPJ,RNF17,RNF17	155945,-2430,-2430
chr4:15343528-15343876	chr4	+	15343531	15343904	True	NM_001135170,NM_001193534	chr4,chr4	+,-	C1QTNF7,FBXL5	-2022,313181
chr15:32907920-32908263	chr15	+	32908045	32908251	True	NM_014783,NM_199357,NR_036650	chr15,chr15,chr15	+,+,-	ARHGAP11A,ARHGAP11A,LOC100288615	-405,-405,-82103
chr15:32907920-32908263	chr15	+	30918716	30918864	False	NM_148911,NM_001039841	chr15,chr15	-,+	CHRFAM7A,ARHGAP11B	-232852,14
chr12:106641215-106641514	chr12	+	106641219	106641563	True	NM_006825,NM_152772	chr12,chr12	-,+	CKAP4,TCP11L2	200,55017
chr3:138329859-138331033	chr3	+	138329897	138330835	True	NM_018147,NM_001033030,NM_001033032,NM_024491,NM_001033031	chr3,chr3,chr3,chr3,chr3	+,+,+,-,+	FAIM,FAIM,FAIM,CEP70,FAIM	-2041,-2418,-2418,-16768,-2418
chr2:238974406-238975665	chr2	+	238974773	238975299	True	NM_016510,NM_030768	chr2,chr2	+,-	SCLY,ILKAP	-5266,137075
chr16:31491684-31491994	chr16	+	31491959	31492035	True	NM_022744,NM_015927,NM_003041,NM_001164719,NM_001042454	chr16,chr16,chr16,chr16,chr16	-,+,+,+,+	C16orf58,TGFB1I1,SLC5A2,TGFB1I1,TGFB1I1	27721,-7484,2403,-8481,-8534
chr18:47088957-47089284	chr18	+	47089095	47089281	True	NM_001035006,NM_006033	chr18,chr18	-,+	RPL17,LIPG	-70160,-719
chr2:233390151-233390676	chr2	+	233390354	233390474	True	NM_001195129,NM_145702,NM_000751	chr2,chr2,chr2	+,-,+	PRSS56,TIGD1,CHRND	-5239,24802,447
chr11:50164416-50165691	chr11	+	50164597	50165482	True	NR_003034,NM_001001955	chr11,chr11	-,+	LOC441601,OR4C13	92201,-190714
chr19:48500417-48501523	chr19	+	48500457	48501392	True	NM_022142,NM_001128326	chr19,chr19	+,-	ELSPBP1,BSPH1	-2611,-5030
chr1:48570061-48571445	chr1	+	48570286	48571470	True	NR_026749,NM_001011547	chr1,chr1	-,+	SKINTL,SLC5A9	76680,116886
chr5:172200201-172200808	chr5	+	172200293	172200843	True	NM_004417,NM_001031711	chr5,chr5	-,+	DUSP1,ERGIC1	-2090,60379
chr11:63753447-63753656	chr11	+	63753478	63753666	True	NM_017670,NR_003089,NM_173587	chr11,chr11,chr11	+,+,-	OTUB1,OTUB1,RCOR2	-204,-204,-69162
chr4:39044797-39046285	chr4	+	39045190	39045977	True	NM_024943,NM_001171654,NM_001007075	chr4,chr4,chr4	-,+,+	TMEM156,KLHL5,KLHL5	-11149,473,473
chr2:170682093-170682339	chr2	+	170682203	170682298	True	NM_172070,NM_014168	chr2,chr2	+,-	UBR3,METTL5	1719,-850
chr10:69580700-69582475	chr10	+	69581338	69582271	True	NM_021800,NM_012238	chr10,chr10	-,+	DNAJC12,SIRT1	15716,62155
chr18:24444638-24444847	chr18	+	24444704	24444886	True	NM_004028,NR_026908,NM_001650	chr18,chr18,chr18	-,+,-	AQP4,C18orf16,AQP4	-2129,385,880
chr5:150226491-150227071	chr5	+	150226548	150226968	True	NM_001172831,NM_001145805	chr5,chr5	-,+	ZNF300,IRGM	57635,-514
chr11:7505803-7507037	chr11	+	7505920	7507029	True	NM_198474,NM_016229	chr11,chr11	+,-	OLFML1,CYB5R2	113,187842
chr3:125773628-125775054	chr3	+	125773727	125775015	True	NM_001008487,NM_001012337	chr3,chr3	-,+	SLC41A3,ROPN1B	653,-85750
chr16:29824597-29824806	chr16	+	29824675	29824741	True	NM_017458,NM_024516,NM_005115,NM_006319,NM_145239,NM_001042539,NM_002383	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,-,+,+,+	MVP,C16orf53,MVP,CDIPT,PRRT2,MAZ,MAZ	6973,2786,6973,49887,-1317,-6871,-6871
chr11:57365086-57365493	chr11	+	57365145	57365215	True	NM_001032295,NM_000062,NM_198183	chr11,chr11,chr11	+,+,-	SERPING1,SERPING1,UBE2L6	489,-169,-29692
chr13:109250103-109250580	chr13	+	109250103	109250621	True	NM_001098268,NM_015011	chr13,chr13	-,+	LIG4,MYO16	-379387,-1654
chr1:43737253-43737969	chr1	+	43737294	43737938	True	NM_182517,NM_144626	chr1,chr1	-,+	C1orf210,TMEM125	13362,-1680
chr20:43595647-43595992	chr20	+	43595713	43596029	True	NM_006809,NM_006282	chr20,chr20	-,+	TOMM34,STK4	-6599,-644
chr19:45409798-45411054	chr19	+	45409878	45411024	True	NM_145288,NM_001645,NM_000041	chr19,chr19,chr19	-,+,+	ZNF296,APOC1,APOE	168714,6896,-890
chr7:150757372-150757588	chr7	+	150757377	150757453	True	NM_001164410,NM_001199693,NM_001199692,NM_003040,NM_004935,NM_001199694	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,-,+	CDK5,SLC4A2,SLC4A2,SLC4A2,CDK5,SLC4A2	-2325,2180,-2129,-771,-2325,2285
chr20:3660989-3661401	chr20	+	3661124	3661380	True	NM_153202,NM_001197327,NM_025220	chr20,chr20,chr20	-,+,-	ADAM33,HSPA12B,ADAM33	1408,51936,1408
chr10:73724722-73725033	chr10	+	73724942	73725014	True	NM_002778,NM_004273	chr10,chr10	-,+	PSAP,CHST3	-113860,-873
chrX:15762379-15763146	chrX	+	15762396	15763005	True	NR_002725,NM_007220	chrX,chrX	-,+	INE2,CA5B	42766,-6035
chr1:89450037-89451718	chr1	+	89450245	89451517	True	NM_019610,NM_001008662,NM_001008661,NM_001162536,NM_006256	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	RBMXL1,CCBL2,CCBL2,RBMXL1,PKN2	7184,7184,7184,7184,-300382
chr5:65892886-65893651	chr5	+	65893092	65893622	True	NM_001164664,NM_198828,NM_005582	chr5,chr5,chr5	+,+,-	MAST4,MAST4,CD180	-969,-969,599045
chr18:56533417-56534824	chr18	+	56533494	56534707	True	NM_018181,NM_052947	chr18,chr18	+,-	ZNF532,ALPK2	-3491,-237305
chr6:11044865-11045161	chr6	+	11044949	11045152	True	NM_017770,NM_001135575	chr6,chr6	-,+	ELOVL2,LOC221710	-325,49113
chr10:5531853-5532859	chr10	+	5531897	5532751	True	NM_017422,NM_005185	chr10,chr10	-,+	CALML5,CALML3	8839,34172
chr14:75536332-75536614	chr14	+	75536334	75536660	True	NM_001042430,NM_203488,NM_001107,NM_024643	chr14,chr14,chr14,chr14	+,-,-,+	FAM164C,ACYP1,ACYP1,FAM164C	-86,-5598,-5598,-86
chr20:23029593-23029857	chr20	+	23029625	23029829	True	NM_001052,NM_000361	chr20,chr20	+,-	SSTR4,THBD	-13619,522
chr9:140031344-140031626	chr9	+	140031488	140031560	True	NM_000832,NM_013379,NM_007327,NM_021569,NM_001185090,NM_001185091	chr9,chr9,chr9,chr9,chr9,chr9	+,-,+,+,+,+	GRIN1,DPP7,GRIN1,GRIN1,GRIN1,GRIN1	2048,-22293,2048,2048,2048,2048
chr6:10435847-10436434	chr6	+	10435956	10436376	True	NR_033910,NR_027793	chr6,chr6	+,-	LOC100130275,C6orf218	-23467,-901
chr5:124145438-124146016	chr5	+	124145479	124146035	True	NM_004384,NM_020747	chr5,chr5	+,-	CSNK1G3,ZNF608	-1297737,-64674
chr9:106855907-106856337	chr9	+	106855906	106856230	True	NM_001001919,NM_006444,NM_001042551,NM_001042550	chr9,chr9,chr9,chr9	-,+,+,+	OR13C4,SMC2,SMC2,SMC2	433310,310,310,600
chr15:75133913-75134865	chr15	+	75133950	75134778	True	NM_001030005,NM_001099436	chr15,chr15	+,-	CPLX3,ULK3	-15050,824
chr19:11547473-11547947	chr19	+	11547521	11547683	True	NM_001001329,NM_145045,NM_002743	chr19,chr19,chr19	+,-,+	PRKCSH,CCDC151,PRKCSH	-1303,-1541,-1303
chr5:1010513-1010756	chr5	+	1010514	1010748	True	NM_033120,NM_006598	chr5,chr5	+,-	NKD2,SLC12A7	-1403,101474
chr4:124591747-124592441	chr4	+	124591768	124592441	True	NM_198041,NR_027105	chr4,chr4	-,+	NUDT6,LOC285419	-747645,-17893
chr19:38271702-38272052	chr19	+	38271780	38271894	True	NM_001172689,NM_001172690,NM_001172691,NM_001172692,NM_015073,NM_152360	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,+,-	ZNF573,ZNF573,ZNF573,ZNF573,SIPA1L3,ZNF573	-1550,-1550,-1550,-1550,125973,-1550
chr9:132221933-132222376	chr9	+	132221937	132222171	True	NM_199350,NM_001012715	chr9,chr9	-,+	C9orf50,C9orf106	160934,-138693
chr2:61244330-61244945	chr2	+	61244345	61244759	True	NM_144709,NM_002618	chr2,chr2	-,+	PUS10,PEX13	656,52
chrX:77379397-77380480	chrX	+	77379447	77380445	True	NM_000291,NM_015975	chrX,chrX	+,-	PGK1,TAF9B	-19839,14784
chr9:131449809-131450215	chr9	+	131449912	131450211	True	NM_052844,NM_001122821,NM_003011	chr9,chr9,chr9	-,+,+	WDR34,SET,SET	-30783,-4029,1297
chr5:95288735-95290201	chr5	+	95288739	95290091	True	NR_026936,NM_012081	chr5,chr5	+,-	C5orf27,ELL2	-100854,7743
chr3:46921451-46922748	chr3	+	46921567	46922709	True	NM_000316,NM_001184744,NM_000258	chr3,chr3,chr3	+,+,-	PTH1R,PTH1R,MYL3	-2382,1029,-16594
chr4:41269556-41271361	chr4	+	41269895	41271394	True	NM_173075,NM_004181	chr4,chr4	-,+	APBB2,UCHL1	-53260,-11049
chr6:33254597-33255389	chr6_qbl_hap6	+	4486922	4487601	False	NM_014260,NM_001185181,NM_003782,NM_001164267,NM_005452	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	+,+,+,-,-	PFDN6,PFDN6,B3GALT4,WDR46,WDR46	2019,2053,-9823,1996,1996
chr6:33254597-33255389	chr6_mcf_hap5	+	4728359	4729102	False	NM_014260,NM_003782,NM_001164267,NM_005452	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	+,+,-,-	PFDN6,B3GALT4,WDR46,WDR46	2019,-9719,1996,1996
chr6:33254597-33255389	chr6_cox_hap2	+	4698429	4699172	False	NM_014260,NM_003782,NM_001164267,NM_005452	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,+,-,-	PFDN6,B3GALT4,WDR46,WDR46	2019,-9753,1996,1996
chr6:33254597-33255389	chr6	+	33254615	33255358	True	NM_014260,NM_001185181,NM_003782,NM_001164267,NM_005452	chr6,chr6,chr6,chr6,chr6	+,+,+,-,-	PFDN6,PFDN6,B3GALT4,WDR46,WDR46	2019,2053,-9749,1996,1996
chr6:33254597-33255389	chr6_dbb_hap3	+	4535941	4536684	False	NM_014260,NM_003782,NM_001164267,NM_005452	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	+,+,-,-	PFDN6,B3GALT4,WDR46,WDR46	2019,-9753,1996,1996
chr10:6621073-6621387	chr10	+	6621079	6621429	True	NR_036502,NR_036503,NM_006257	chr10,chr10,chr10	+,+,-	LOC439949,LOC439949,PRKCQ	957,957,859
chr14:105483888-105484843	chr14	+	105484206	105484840	True	NM_017955,NM_174891,NM_145701	chr14,chr14,chr14	-,+,-	CDCA4,C14orf79,CDCA4	2635,-31654,2635
chr12:15035719-15036480	chr12	+	15035828	15036458	True	NM_001190839,NM_000900,NM_175874	chr12,chr12,chr12	-,-,+	MGP,MGP,C12orf60	2445,2445,-79373
chr4:72619160-72620347	chr4	+	72619225	72620387	True	NM_004885,NM_000583	chr4,chr4	+,-	NPFFR2,GC	277133,29747
chr14:92411547-92412704	chr14	+	92411628	92412628	True	NM_006329,NM_017437	chr14,chr14	-,+	FBLN5,CPSF2	1468,175669
chr15:42638524-42640392	chr15	+	42639027	42640424	True	NM_000070,NM_001110503	chr15,chr15	+,-	CAPN3,TMEM87A	11273,-73272
chr7:38694941-38695725	chr7	+	38695095	38695627	True	NM_139316,NM_001166018	chr7,chr7	-,+	AMPH,POU6F2	-23928,321981
chr2:235859677-235859973	chr2	+	235859781	235859951	True	NM_014521,NM_005737	chr2,chr2	+,-	SH3BP4,ARL4C	676,-454088
chrX:15352605-15353383	chrX	+	15352842	15353234	True	NR_033835,NR_033836,NM_020473,NM_002641,NM_203281	chrX,chrX,chrX,chrX,chrX	-,-,-,-,+	PIGA,PIGA,PIGA,PIGA,BMX	492,492,492,492,165665
chr1:84851143-84853139	chr1	+	84851321	84853121	True	NM_021233,NR_003927	chr1,chr1	+,-	DNASE2B,UOX	11093,10505
chr11:124482915-124484254	chr11	+	124483221	124483985	True	NM_032811,NR_016021,NM_052959,NM_170601	chr11,chr11,chr11,chr11	+,+,+,-	TBRG1,TBRG1,PANX3,SIAE	8756,8756,-1820,59842
chr19:42759444-42760005	chr19	+	42759518	42759785	True	NM_006494,NM_015125	chr19,chr19	-,+	ERF,CIC	-209,29031
chr6:37667308-37667675	chr6	+	37667403	37667663	True	NM_153487,NM_021943	chr6,chr6	-,+	MDGA1,ZFAND3	-1637,119643
chr10:48389094-48389295	chr10	+	48389110	48389322	True	NM_002900,NM_153034	chr10,chr10	-,+	RBP3,ZNF488	1719,-34072
chr7:6775420-6776022	chr7	+	6775663	6776067	True	NR_002217,NM_016265	chr7,chr7	+,-	PMS2CL,ZNF12	-778,-29097
chr4:3531981-3532378	chr4	+	3532044	3532361	True	NM_002337,NM_173660	chr4,chr4	-,+	LRPAP1,DOK7	1913,-67062
chr10:70589127-70590028	chr10	+	70589354	70590055	True	NM_152709,NM_001130159,NM_001130161,NM_001130162,NM_152707,NM_001130160	chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,-,+	STOX1,STOX1,STOX1,STOX1,SLC25A16,STOX1	-2111,-2111,-2111,-1842,-302074,-2111
chr6:46597031-46597687	chr6	+	46597232	46597658	True	NM_016593,NM_001204051	chr6,chr6	-,+	CYP39A1,SLC25A27	22917,22993
chr4:110621560-110622204	chr4	+	110621680	110622069	True	NM_018983,NM_001226,NM_032992	chr4,chr4,chr4	+,-,-	GAR1,CASP6,CASP6	114596,2610,2610
chr1:111020989-111021783	chr1	+	111021025	111021786	True	NM_005549,NR_003599	chr1,chr1	-,+	KCNA10,CYMP	40062,1601
chr1:156023306-156023506	chr1	+	156023368	156023428	True	NM_020131,NM_014017,NM_001145264,NM_020387	chr1,chr1,chr1,chr1	-,+,+,+	UBQLN4,LAMTOR2,LAMTOR2,RAB25	138,1088,1088,7537
chr20:44416865-44417626	chr20	+	44417021	44417607	True	NM_080614,NM_052951	chr20,chr20	-,+	WFDC3,DNTTIP1	2990,2968
chr15:22835579-22837183	chr15	+	22835600	22837030	True	NR_027407,NM_001102610,NM_052903	chr15,chr15,chr15	-,+,+	GOLGA8DP,TUBGCP5,TUBGCP5	-119872,-2256,-2256
chr7:75680496-75681226	chr7	+	75680529	75681263	True	NM_005918,NM_016086	chr7,chr7	+,-	MDH2,STYXL1	-3187,-3208
chr7:27143233-27143672	chr7	+	27143248	27143516	True	NM_005522,NM_153620,NM_006735,NR_002795	chr7,chr7,chr7,chr7	-,-,-,+	HOXA1,HOXA1,HOXA2,HOXA11-AS1	-7623,-7623,-854,81510
chr11:133937997-133938786	chr11	+	133938157	133938823	True	NM_014987,NM_032801	chr11,chr11	-,+	IGSF9B,JAM3	-111277,-4
chr3:125636163-125637819	chr3	+	125637164	125637763	True	NM_001015050,NR_024251,NR_024250	chr3,chr3,chr3	-,+,+	ALG1L,LOC100125556,LOC100125556	18183,-1771,-1771
chr16:20704869-20705562	chr16	+	20704869	20705126	True	NM_202000,NM_052956	chr16,chr16	+,-	ACSM3,ACSM1	70185,-2291
chr11:60469301-60471147	chr11	+	60469301	60471181	True	NM_004778,NM_031457	chr11,chr11	-,+	GPR44,MS4A8B	152313,-2313
chr12:57343878-57345714	chr12	+	57343973	57345647	True	NM_003708,NM_007264	chr12,chr12	-,+	RDH16,GPR182	5821,42707
chr17:10302654-10303240	chr17	+	10302667	10303189	True	NM_020233,NM_002472	chr17,chr17	+,-	C17orf48,MYH8	297737,22129
chr20:1164300-1165383	chr20	+	1164363	1165151	True	NM_018354,NM_001009612	chr20,chr20	-,+	C20orf46,C20orf202	16,18946
chr1:161173018-161174575	chr1	+	161173170	161174588	True	NM_004550,NM_005099,NM_001166159	chr1,chr1,chr1	+,-,+	NDUFS2,ADAMTS4,NDUFS2	-4116,-4325,-1284
chr9:95860645-95861005	chr9	+	95860681	95860963	True	NM_032310,NM_004148	chr9,chr9	+,-	C9orf89,NINJ1	-2282,35657
chr15:53094104-53095602	chr15	+	53094240	53095643	True	NM_004498,NM_002748	chr15,chr15	-,+	ONECUT1,MAPK6	-12031,-782880
chr1:26350356-26350804	chr1	+	26350357	26350619	True	NM_001004434,NM_004455	chr1,chr1	-,+	SLC30A2,EXTL1	22035,-2137
chr7:15727136-15727567	chr7	+	15727234	15727562	True	NM_001195280,NM_005924	chr7,chr7	+,-	LOC100506049,MEOX2	838942,-926
chr9:97088998-97089677	chr9	+	97089045	97089327	True	NM_017561,NR_033937	chr9,chr9	-,+	FAM22F,LOC100132077	1649,5430
chr9:97088998-97089677	chr9	-	99692881	99692931	False	NM_001170741,NM_001045477,NM_001001662	chr9,chr9,chr9	+,+,-	FAM22G,FAM22G,ZNF782	-1646,-1646,-76492
chr20:35277420-35278758	chr20	+	35277435	35278624	True	NM_175077,NM_032214,NR_026562	chr20,chr20,chr20	-,-,+	SLA2,SLA2,C20orf24	-2877,-2877,-43349
chr21:28515465-28515814	chr21	+	28515543	28515785	True	NR_024357,NM_007038	chr21,chr21	+,-	NCRNA00113,ADAMTS5	578912,-176104
chr19:36239328-36239612	chr19	+	36239380	36239648	True	NM_144987,NM_001040425,NM_024660,NM_001039887,NM_144617,NM_172341,NM_019104	chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,+,-,+,+	U2AF1L4,U2AF1L4,IGFLR1,C19orf55,HSPB6,PSENEN,LIN37	-3044,-3044,-6029,9395,8332,-2937,-29
chr1:156783260-156783801	chr1	+	156783450	156783848	True	NM_003975,NM_001007792,NM_001161441,NM_001161443,NM_001161442,NM_001161444	chr1,chr1,chr1,chr1,chr1,chr1	-,+,-,-,-,-	SH2D2A,NTRK1,SH2D2A,SH2D2A,SH2D2A,SH2D2A	2842,1693,2842,2141,2842,2842
chr9:127539268-127539516	chr9	+	127539272	127539562	True	NM_001489,NM_033334,NM_182487	chr9,chr9,chr9	-,-,+	NR6A1,NR6A1,OLFML2A	-5696,-5696,-70
chr3:158519546-158519818	chr3	+	158519637	158519797	True	NM_002888,NM_001167903,NM_022736	chr3,chr3,chr3	-,+,+	RARRES1,MFSD1,MFSD1	-69362,13,13
chr7:6793935-6794241	chr7	+	6794020	6794126	True	NM_173565,NM_016265,NM_001099697	chr7,chr7,chr7	+,-,+	RSPH10B,ZNF12,RSPH10B2	-338,-47454,-338
chr7:6793935-6794241	chr7	-	6009927	6010033	False	NM_006303,NM_173565,NM_001099697	chr7,chr7,chr7	+,-,-	AIMP2,RSPH10B,RSPH10B2	38848,338,338
chr4:101111948-101112419	chr4	+	101112005	101112417	True	NM_145244,NR_002799	chr4,chr4	-,+	DDIT4L,LOC256880	-350,-240420
chr22:39022352-39022588	chr22	+	39022495	39022587	True	NM_001002880,NM_001013647	chr22,chr22	+,-	CBY1,LOC646851	30070,30103
chr18:47719976-47720207	chr18	+	47720021	47720123	True	NM_001039535,NM_001080467	chr18,chr18	+,-	SKA1,MYO5B	181268,1378
chr9:34591975-34592206	chr9	+	34592003	34592097	True	NR_024369,NM_001842,NM_147164	chr9,chr9,chr9	+,-,-	LOC415056,CNTFR,CNTFR	-24044,-2281,-2281
chr7:45016489-45017415	chr7	+	45016489	45017287	True	NR_002952,NR_003697,NM_033054,NR_030770	chr7,chr7,chr7,chr7	-,-,-,+	SNORA9,C7orf40,MYO1G,CCM2	7872,9022,1467,22057
chr6:30857158-30858835	chr6_qbl_hap6	+	2151203	2151277	False	NM_013993,NM_001202521,NM_001202522,NM_001202523,NM_013994,NM_001954,NM_205854	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	+,+,+,+,+,+,-	DDR1,DDR1,DDR1,DDR1,DDR1,DDR1,SFTA2	-5940,-1802,-1802,-5510,-1802,-6406,41696
chr6:30857158-30858835	chr6_mcf_hap5	+	2240173	2240247	False	NM_205854,NM_001202523,NM_001954,NM_013993	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	-,+,+,+	SFTA2,DDR1,DDR1,DDR1	41694,-5510,-6406,-5940
chr6:30857158-30858835	chr6_mann_hap4	+	2206301	2206375	False	NM_013993,NM_001202521,NM_001202522,NM_001202523,NM_013994,NM_001954,NM_205854	chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4	+,+,+,+,+,+,-	DDR1,DDR1,DDR1,DDR1,DDR1,DDR1,SFTA2	-5940,-1802,-1802,-5510,-1802,-6406,41708
chr6:30857158-30858835	chr6	+	30858216	30858290	True	NM_013993,NM_001202521,NM_001202522,NM_001202523,NM_013994,NM_001954,NM_205854	chr6,chr6,chr6,chr6,chr6,chr6,chr6	+,+,+,+,+,+,-	DDR1,DDR1,DDR1,DDR1,DDR1,DDR1,SFTA2	-5940,-1802,-1802,-5510,-1802,-6406,41712
chr6:30857158-30858835	chr6_cox_hap2	+	2370314	2370388	False	NM_013993,NM_001202521,NM_001202522,NM_001202523,NM_013994,NM_001954,NM_205854	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,+,+,+,+,+,-	DDR1,DDR1,DDR1,DDR1,DDR1,DDR1,SFTA2	-5940,-1802,-1802,-5510,-1802,-6406,41537
chr12:123215522-123215783	chr12	+	123215524	123215734	True	NM_032554,NM_003677	chr12,chr12	-,+	GPR81,DENR	-395,21636
chr6:33590060-33590530	chr6	+	33590074	33590518	True	NR_027908,NM_002224	chr6,chr6	-,+	C6orf227,ITPR3	-28959,-969
chr13:103413341-103415264	chr13	+	103413562	103414741	True	NM_001159596,NM_001146197	chr13,chr13	+,-	BIVM,C13orf40	36657,-2140
chr20:61906795-61907046	chr20	+	61906826	61907086	True	NM_018209,NM_152864,NM_175609	chr20,chr20,chr20	+,-,+	ARFGAP1,NKAIN4,ARFGAP1	-2713,-20934,-2713
chr8:94968290-94968603	chr8	+	94968553	94968649	True	NM_203390,NM_001161778	chr8,chr8	-,+	RBM12B,PDP1	-215329,-38612
chr11:115375716-115376193	chr11	+	115375797	115376211	True	NM_001098517,NM_182495,NM_014333	chr11,chr11,chr11	-,+,-	CADM1,FAM55B,CADM1	-556,-826648,-556
chr19:39140153-39140472	chr19	+	39140174	39140520	True	NM_004924,NM_007181	chr19,chr19	+,-	ACTN4,MAP4K1	-1958,-31531
chr13:21514328-21515891	chr13	+	21514327	21515743	True	NM_022459,NM_005870	chr13,chr13	-,+	XPO4,SAP18	-37414,198909
chr12:121474306-121475430	chr12	+	121474475	121475169	True	NM_198213,NM_003733,NM_000545	chr12,chr12,chr12	-,-,+	OASL,OASL,HNF1A	1661,1661,-57984
chr1:16566160-16567401	chr1	+	16566450	16566929	True	NM_001114600,NM_030907	chr1,chr1	+,-	C1orf144,RSG1	126653,-2791
chr20:62712758-62713168	chr20	+	62712992	62713078	True	NM_182647,NM_001007125,NM_001039467,NM_001200019,NM_000913,NM_005873	chr20,chr20,chr20,chr20,chr20,chr20	+,-,-,+,+,-	OPRL1,C20orf201,RGS19,OPRL1,OPRL1,RGS19	-1572,2684,-1668,3290,-1572,-2147
chr11:126031724-126032599	chr11	+	126032248	126032585	True	NM_001144827,NM_024556	chr11,chr11	-,+	RPUSD4,FAM118B	49059,49033
chr3:9771277-9772580	chr3	+	9771577	9772481	True	NM_004634,NM_003656,NM_001003694	chr3,chr3,chr3	+,-,+	BRPF1,CAMK1,BRPF1	952,39237,952
chr19:4224738-4225109	chr19	+	4224742	4224846	True	NM_005755,NM_016539	chr19,chr19	+,-	EBI3,SIRT6	4693,-42146
chr13:47065596-47067284	chr13	+	47065883	47067297	True	NM_001164211,NM_025113	chr13,chr13	+,-	LRCH1,C13orf18	59998,-104248
chr17:7745619-7745850	chr17	+	7745654	7745874	True	NM_032356,NM_001080424	chr17,chr17	-,+	LSMD1,KDM6B	15348,-2470
chr3:160938586-160939139	chr3	+	160938671	160939095	True	NM_015938,NM_033168	chr3,chr3	+,-	NMD3,B3GALNT1	3,-115511
chr17:38656704-38657063	chr17	+	38656785	38657105	True	NM_032865,NM_001552	chr17,chr17	-,+	TNS4,IGFBP4	799,-57160
chr8:16879679-16880342	chr8	+	16879991	16880068	True	NM_181723,NM_019851	chr8,chr8	+,-	EFHA2,FGF20	4678,-20317
chr1:31422373-31423445	chr1	+	31422748	31423310	True	NR_033295,NR_004054,NR_002762	chr1,chr1,chr1	-,-,+	SNORD103B,SNORD103A,PRO0611	-696,-696,37601
chr22:18632279-18632578	chr22	+	18632338	18632432	True	NM_001136004,NM_017414	chr22,chr22	-,+	MICAL3,USP18	-125013,325
chr5:139177579-139177886	chr5	+	139177595	139177919	True	NM_032289,NM_001184935	chr5,chr5	+,-	PSD2,NRG2	-2240,245015
chr17:18422411-18424309	chr17	+	18422551	18423501	True	NR_026809,NR_003554,NM_001040078	chr17,chr17,chr17	-,-,+	FAM106A,LOC220594,LGALS9C	6719,1125,-42511
chr17:18422411-18424309	chr17	-	20327905	20327955	False	NR_023380,NM_001042685	chr17,chr17	+,-	CCDC144C,LGALS9B	-103469,42943
chr17:4871398-4871790	chr17	+	4871417	4871737	True	NM_004890,NM_053013	chr17,chr17	-,+	SPAG7,ENO3	-285,-17091
chr8:1772130-1772350	chr8	+	1772239	1772375	True	NR_030326,NM_014629,NR_033895	chr8,chr8,chr8	+,+,-	MIR596,ARHGEF10,LOC286083	-6893,-141,-521412
chr9:140316144-140317063	chr9	+	140316502	140317094	True	NM_006647,NM_017820	chr9,chr9	+,-	NOXA1,EXD3	752,670
chr15:25100972-25102943	chr15	+	25101325	25102821	True	NM_022805,NM_130838	chr15,chr15	+,-	SNRPN,UBE3A	42,547882
chr8:19540310-19541531	chr8	+	19540425	19541063	True	NR_024040,NM_018371,NM_018142	chr8,chr8,chr8	-,-,+	CSGALNACT1,CSGALNACT1,INTS10	-164,-331,133854
chr8:125985104-125985513	chr8	+	125985283	125985501	True	NM_014846,NM_152412	chr8,chr8	-,+	KIAA0196,ZNF572	118610,37
chr5:157158681-157159312	chr5	+	157158723	157159095	True	NM_017872,NM_178424	chr5,chr5	+,-	THG1L,SOX30	-451,-79295
chr17:27037447-27038208	chr17	+	27037543	27038182	True	NR_024575,NR_024579,NM_000984,NM_152465,NM_001144943,NR_000013,NM_001142625,NM_001144942,NM_001142624,NM_031934	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,-,-,+,-,-,-,-	RAB34,RAB34,RPL23A,PROCA1,RAB34,SNORD42B,RAB34,RAB34,RAB34,RAB34	7119,7119,8817,740,7154,9385,7154,6776,7154,6776
chr8:27467781-27468682	chr8	+	27467847	27468697	True	NM_001831,NM_016240,NM_203339,NM_001171138	chr8,chr8,chr8,chr8	-,+,-,-	CLU,SCARA3,CLU,CLU	3680,22879,291,621
chr7:92768104-92768801	chr7	+	92768119	92768845	True	NM_024553,NM_152703	chr7,chr7	+,-	CCDC132,SAMD9L	92807,8885
chr12:51633105-51633846	chr12	+	51633180	51633767	True	NM_014764,NM_001136269,NM_001136268,NR_026893,NM_001136264,NM_001136267,NM_001136266	chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,+,-,+,+,+	DAZAP2,DAZAP2,DAZAP2,POU6F1,DAZAP2,DAZAP2,DAZAP2	-723,-723,-723,-21703,-723,-723,-723
chr7:102284896-102285778	chr7	+	102285198	102285258	True	NM_001114403,NM_001166339,NM_001031618	chr7,chr7,chr7	-,+,+	UPK3BL,SPDYE2L,SPDYE2	-1960,5513,5513
chr7:102284896-102285778	chr7	+	102186107	102186167	False	NM_001031618,NM_001166339,NM_001097615	chr7,chr7,chr7	+,+,-	SPDYE2,SPDYE2L,POLR2J3	5511,5511,26951
chr7:102284896-102285778	chr7	+	44031801	44031867	False	NM_175064,NR_003655	chr7,chr7	+,-	SPDYE1,POLR2J4	8621,26931
chr3:72496801-72497430	chr3	+	72496985	72497307	True	NM_001080393,NM_012234	chr3,chr3	+,-	GXYLT2,RYBP	440077,-1211
chr3:10187244-10188158	chr3	+	10187446	10188206	True	NM_000551,NM_198156,NM_001164839	chr3,chr3,chr3	+,+,-	VHL,VHL,C3orf24	-4187,-4187,-37531
chr1:120292138-120293436	chr1	+	120292248	120293470	True	NM_001166107,NM_006623	chr1,chr1	-,+	HMGCS2,PHGDH	18135,-37880
chr2:132252143-132252643	chr2	+	132252296	132252593	True	NM_001085365,NR_026922	chr2,chr2	-,+	MZT2A,LOC150776	-2232,-1961
chr2:132252143-132252643	chr2	-	130936454	130936504	False	NM_017951,NM_025029,NM_017751,NR_033232,NR_033231,NR_033230,NM_001171083	chr2,chr2,chr2,chr2,chr2,chr2,chr2	-,+,-,-,-,-,-	SMPD4,MZT2B,SMPD4,SMPD4,SMPD4,SMPD4,SMPD4	2876,2996,2876,2876,2876,3869,2876
chr7:48964300-48966276	chr7	+	48964311	48965648	True	NR_003595,NM_152782	chr7,chr7	+,-	CDC14C,SUN3	-205,-895595
chr7:48964300-48966276	chr7	-	48886697	48887446	False	NR_003595,NM_152782	chr7,chr7	+,-	CDC14C,SUN3	76710,-817981
chr5:60689166-60689419	chr5	+	60689214	60689427	True	NM_001048249,NM_020928	chr5,chr5	-,+	C5orf43,ZSWIM6	-230912,-61176
chr2:233791366-233791730	chr2	+	233791527	233791768	True	NM_001114090,NM_206895	chr2,chr2	-,+	NGEF,C2orf82	1143,-56584
chrX:70517860-70518645	chrX	+	70517997	70518679	True	NM_001171162,NM_012278	chrX,chrX	-,+	ZMYM3,ITGB1BP2	-42950,2948
chr12:130522786-130523614	chr12	+	130522829	130523615	True	NR_024457,NM_007197	chr12,chr12	-,+	LOC100190940,FZD10	3322,123388
chr12:27156167-27156774	chr12	+	27156252	27156774	True	NM_004264,NM_016551	chr12,chr12	+,-	MED21,TM7SF3	18708,10615
chr5:176944621-176945344	chr5	+	176944661	176945357	True	NM_001144875,NM_001174102,NM_024872,NM_001144876,NM_016222	chr5,chr5,chr5,chr5,chr5	-,+,-,-,-	DOK3,PRR7,DOK3,DOK3,DDX41	-7234,-69386,-7803,-7234,-694
chr5:176944621-176945344	chr5	+	176945488	176945773	False	NM_001144875,NM_001174102,NM_024872,NM_001144876,NM_016222	chr5,chr5,chr5,chr5,chr5	-,+,-,-,-	DOK3,PRR7,DOK3,DOK3,DDX41	-8061,-70213,-8630,-8061,-1521
chr1:85100623-85102548	chr1	+	85100650	85102580	True	NR_027379,NR_036561	chr1,chr1	-,+	C1orf180,SPATA1	53,-128730
chr17:37785457-37787042	chr17	+	37785739	37786802	True	NM_006160,NM_006804,NM_001165937,NM_181505,NM_001165938,NM_032192	chr17,chr17,chr17,chr17,chr17,chr17	-,+,+,+,+,+	NEUROD2,STARD3,STARD3,PPP1R1B,STARD3,PPP1R1B	-21564,6530,6530,-1037,6530,-2611
chr1:45271328-45271996	chr1	+	45271561	45271899	True	NM_001013632,NM_004073,NM_001136537	chr1,chr1,chr1	-,+,+	TCTEX1D4,PLK3,BTBD19	1108,-5584,2254
chrY:19691363-19691759	chrY	+	19691382	19691758	True	NR_028084,NR_002161,NR_002160	chrY,chrY,chrY	+,-,-	FAM41AY2,NCRNA00230A,NCRNA00230B	-78595,-29,-50
chrY:19691363-19691759	chrY	-	20488014	20488389	False	NR_028083,NR_002161,NR_002160	chrY,chrY,chrY	-,+,+	FAM41AY1,NCRNA00230A,NCRNA00230B	78593,29,50
chr9:91934612-91936301	chr9	+	91934670	91936274	True	NM_016848,NM_001827,NR_036108,NM_024077	chr9,chr9,chr9,chr9	-,+,+,+	SHC3,CKS2,MIR3153,SECISBP2	-140988,-8608,-7581,-1309
chr11:65290039-65290927	chr11	+	65290204	65290858	True	NM_001048218,NM_001130144,NM_020680	chr11,chr11,chr11	+,-,+	SCYL1,LTBP3,SCYL1	1689,34891,1689
chr7:128863757-128864450	chr7	+	128863805	128864415	True	NM_001130720,NM_015328,NR_034053	chr7,chr7,chr7	+,+,-	AHCYL2,AHCYL2,TNPO3	439,439,-168578
chr19:30209913-30211632	chr19	+	30210936	30211057	True	NM_001031726,NM_024310,NM_031448	chr19,chr19,chr19	-,+,-	C19orf12,PLEKHF1,C19orf12	-4973,-54662,-4484
chr15:102027735-102028577	chr15	+	102027835	102028502	True	NM_002570,NM_001005326,NM_138324,NM_138319,NM_138325,NM_138322,NM_138323,NM_138320,NM_138321	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,+,-,-,-,-,-,-,-	PCSK6,OR4F6,PCSK6,PCSK6,PCSK6,PCSK6,PCSK6,PCSK6,PCSK6	1736,317420,1736,1736,1736,1736,1736,1736,1736
chr10:43931540-43931957	chr10	+	43931703	43931885	True	NR_026693,NM_001098204	chr10,chr10	+,-	ZNF487P,HNRNPF	688,-27007
chr7:99686219-99686487	chr7	+	99686265	99686382	True	NM_017715,NR_029831,NR_029498,NR_029510,NM_032924,NM_006833	chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,+	ZNF3,MIR106B,MIR25,MIR93,ZNF3,COPS6	-6894,5372,4941,5145,-6894,200
chr7:44580224-44580844	chr7	+	44580262	44580436	True	NM_001101648,NM_001003941,NM_013389	chr7,chr7,chr7	-,+,-	NPC1L1,OGDH,NPC1L1	528,65684,528
chr7:6897512-6897730	chr7	+	6897551	6897631	True	NM_198097,NM_173565	chr7,chr7	-,+	C7orf28B,RSPH10B	-31625,-103862
chr8:144790793-144791094	chr8	+	144790852	144791138	True	NM_001162914,NM_139021	chr8,chr8	-,+	LOC100130274,MAPK15	-573,7368
chr1:27702435-27702690	chr1	+	27702587	27702683	True	NM_003665,NM_207397,NM_005281,NM_004672,NM_173452	chr1,chr1,chr1,chr1,chr1	-,-,+,-,-	FCN3,CD164L2,GPR3,MAP3K6,FCN3	-1272,7172,16468,-9250,-1272
chr2:190556075-190556533	chr2	+	190556157	190556515	True	NM_144708,NM_022353	chr2,chr2	+,-	ANKAR,OSGEPL1	-15509,71469
chr20:19191143-19191755	chr20	+	19191176	19191658	True	NR_024564,NM_020689	chr20,chr20	-,+	LOC100130264,SLC24A3	73632,1631
chr20:44598042-44599320	chr20	+	44598085	44599303	True	NM_022104,NM_022095	chr20,chr20	+,-	PCIF1,ZNF335	-34819,1580
chr19:14248164-14248382	chr19	+	14248301	14248417	True	NR_024282,NM_018154	chr19,chr19	+,-	LOC113230,ASF1B	-64531,-861
chr2:70353041-70354053	chr2	+	70353170	70353865	True	NM_006196,NR_024444	chr2,chr2	+,-	PCBP1,LOC100133985	-38636,-722
chr11:111738771-111740693	chr11	+	111738968	111740411	True	NM_138378,NM_001077690,NM_001077691,NM_024740,NM_022761,NM_001077692	chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,+,-	FDXACB1,ALG9,ALG9,ALG9,C11orf1,ALG9	9800,1952,1651,1952,9536,1651
chr4:89625465-89626170	chr4	+	89625500	89625960	True	NR_002806,NM_153757	chr4,chr4	+,-	FAM13AOS,NAP1L5	4979,-6477
chr5:70374835-70375247	chr5	+	70375034	70375102	True	NM_022877,NM_001515	chr5,chr5	+,-	SMN2,GTF2H2	-154327,-11537
chr5:70374835-70375247	chr5	-	68844446	68844514	False	NR_027439,NM_001098728	chr5,chr5	-,+	LOC100272216,GTF2H2C	84574,11536
chr3:111576521-111577966	chr3	+	111577336	111577964	True	NM_024508,NM_145753,NM_001134438,NM_001134439	chr3,chr3,chr3,chr3	-,+,+,+	ZBED2,PHLDB2,PHLDB2,PHLDB2	-263170,62,62,603
chr15:75496414-75498017	chr15	+	75496491	75497662	True	NM_015492,NR_030360	chr15,chr15	+,-	C15orf39,MIR631	-2321,148414
chr12:48966143-48966663	chr12	+	48966215	48966509	True	NM_001005203,NM_002289	chr12,chr12	+,-	OR8S1,LALBA	-46853,-2386
chr4:21698518-21699334	chr4	+	21698518	21699325	True	NM_001128432,NM_001035003	chr4,chr4	+,-	GBA3,KCNIP4	995222,43
chr11:67439785-67440492	chr11	+	67439928	67439992	True	NM_007103,NM_000695,NM_001031615	chr11,chr11,chr11	+,-,-	NDUFV1,ALDH3B2,ALDH3B2	-65660,2160,8743
chr12:50368313-50369418	chr12	+	50368549	50369369	True	NM_001126103,NM_001652	chr12,chr12	-,+	RACGAP1,AQP6	49988,-1980
chr1:1116220-1117471	chr1	+	1116721	1117497	True	NM_004195,NM_153254,NM_001130045	chr1,chr1,chr1	-,+,+	TNFRSF18,TTLL10,TTLL10	24642,-1695,-7486
chr19:41619185-41620407	chr19	+	41619393	41620271	True	NM_030589,NM_000774	chr19,chr19	-,+	CYP2A7,CYP2F1	-230736,81
chr2:27851646-27852013	chr2	+	27851824	27852062	True	NM_001145047,NR_026735,NM_001142683,NM_007266,NM_024584,NM_001145049,NM_001145048	chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,+,-,+,-,+,+	GPN1,GPN1,CCDC121,GPN1,CCDC121,GPN1,GPN1	-360,-12,-79,-12,44,-360,-360
chr1:212965831-212967342	chr1	+	212966192	212967141	True	NM_001042553,NM_001042552,NM_001146170,NM_001146171,NM_001146169,NM_001042549,NM_015471	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-,-	TATDN3,TATDN3,TATDN3,TATDN3,TATDN3,NSL1,NSL1	-1075,-1075,-1075,-1075,-1075,-1053,-1053
chr2:64371678-64372052	chr2	+	64371690	64372068	True	NM_006759,NM_020651	chr2,chr2	+,-	UGP2,PELI1	-302727,-85
chr1:227750119-227750848	chr1	+	227750166	227750832	True	NR_036753,NR_033184,NM_178549	chr1,chr1,chr1	-,+,+	ZNF847P,ZNF678,ZNF678	134626,387,387
chr8:12991204-12992255	chr8	+	12991265	12992026	True	NM_001099677,NM_006094	chr8,chr8	+,-	KIAA1456,DLC1	-121543,-456
chr14:50999476-50999678	chr14	+	50999522	50999699	True	NM_001127713,NM_006575,NM_198794	chr14,chr14,chr14	+,-,-	ATL1,MAP4K5,MAP4K5	100,-146,-146
chr12:89768125-89769221	chr12	+	89768136	89769047	True	NR_028138,NM_022652	chr12,chr12	+,-	LOC338758,DUSP6	333684,-21840
chr17:61561347-61561625	chr17	+	61561429	61561489	True	NM_152830,NM_001915,NM_000789,NM_001178057	chr17,chr17,chr17,chr17	+,-,+,+	ACE,CYB561,ACE,ACE	688,-37707,-7058,688
chr5:118297274-118297675	chr5	+	118297278	118297628	True	NM_173666,NR_036052	chr5,chr5	-,+	DTWD2,MIR1244-1	26676,12652
chrY:26724683-26724987	chrY	+	26724682	26724988	True	NR_002178,NM_020364,NR_002177,NR_001525	chrY,chrY,chrY,chrY	+,-,+,+	TTTY4B,DAZ3,TTTY4C,TTTY4	-8390,234701,-8390,-8390
chrY:26724683-26724987	chrY	+	25090924	25091230	False	NR_002178,NR_002177,NM_004081,NR_001525	chrY,chrY,chrY,chrY	+,+,-,+	TTTY4B,TTTY4C,DAZ1,TTTY4	-8379,-8379,254059,-8379
chrY:26724683-26724987	chrY	-	27237399	27237705	False	NR_002178,NR_002177,NM_001005786,NR_001525	chrY,chrY,chrY,chrY	-,-,+,-	TTTY4B,TTTY4C,DAZ2,TTTY4	8390,8390,-257460,8390
chr9:126683703-126684506	chr9	+	126683710	126684117	True	NM_004789,NM_020946,NM_024820	chr9,chr9,chr9	+,-,-	LHX2,DENND1A,DENND1A	89771,8361,8361
chr3:196295977-196296184	chr3	+	196295981	196296167	True	NM_001105573,NM_182627	chr3,chr3	+,-	FBXO45,WDR53	-307,-568
chr17:38499510-38499855	chr17	+	38499606	38499892	True	NM_001024809,NM_152219	chr17,chr17	+,-	RARA,GJD3	-1386,21103
chr1:45673521-45674644	chr1	+	45673673	45674343	True	NM_020883,NR_024270	chr1,chr1	-,+	ZSWIM5,LOC400752	-1423,95238
chr19:573974-575377	chr19	+	574567	575349	True	NM_198589,NM_005035,NM_001728,NM_198591	chr19,chr19,chr19,chr19	+,-,+,+	BSG,POLRMT,BSG,BSG	-2081,58269,-2081,-3293
chr19:4641259-4642265	chr19	+	4641520	4641994	True	NM_001167942,NM_152362,NM_019107	chr19,chr19,chr19	+,+,-	TNFAIP8L1,TNFAIP8L1,C19orf10	-1542,-2044,28471
chr4:681618-682030	chr4	+	681639	681995	True	NM_002477,NM_032219	chr4,chr4	+,-	MYL5,MFSD7	-9979,1028
chrY:143413-143639	chrY	+	143534	143624	True	NR_028057,NM_018390,NM_012227	chrY,chrY,chrY	+,+,-	PLCXD1,PLCXD1,GTPBP6	-594,4436,37313
chrY:143413-143639	chrX	+	193534	193624	False	NR_028057,NM_018390,NM_012227	chrX,chrX,chrX	+,+,-	PLCXD1,PLCXD1,GTPBP6	-594,4436,37313
chr8:22101571-22102081	chr8	+	22101741	22102095	True	NM_001722,NR_029714	chr8,chr8	+,-	POLR3D,MIR320A	523,511
chr2:219726042-219726921	chr2	+	219726041	219726738	True	NM_017431,NM_006522	chr2,chr2	-,+	PRKAG3,WNT6	-29529,-1560
chr12:43944975-43945379	chr12	+	43944980	43945338	True	NM_025003,NM_001114182	chr12,chr12	-,+	ADAMTS20,IRAK4	436,207408
chr1:220920490-220920862	chr1	+	220920571	220920861	True	NM_017898,NM_012414	chr1,chr1	+,-	MOSC2,RAB3GAP2	814,-474728
chr10:31992016-31993076	chr10	+	31992056	31992985	True	NM_001174094,NM_018287	chr10,chr10	+,-	ZEB1,ARHGAP12	-382043,224840
chr15:50833193-50833446	chr15	+	50833217	50833483	True	NM_005154,NM_203494	chr15,chr15	+,-	USP8,USP50	-116689,5471
chr15:25425970-25427069	chr15	+	25426071	25427053	True	NR_003358,NR_003296,NR_003351,NR_003344,NR_003298,NR_003299,NM_130838,NR_003300,NR_003301,NR_003302,NR_003303,NR_003304,NR_003297,NR_003294,NR_003295	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,-,+,+,+,+,+,+,+,+	SNORD115-43,SNORD115-4,SNORD115-36,SNORD115-29,SNORD115-6,SNORD115-7,UBE3A,SNORD115-8,SNORD115-9,SNORD115-10,SNORD115-11,SNORD115-12,SNORD115-5,SNORD115-2,SNORD115-3	7507,-4143,7507,7507,-478,478,223650,2399,-2234,-2234,7507,-2234,-2237,-8340,-6048
chr5:70323555-70324008	chr5	+	70323612	70323815	True	NM_004536,NM_022892,NM_022877	chr5,chr5,chr5	-,-,+	NAIP,NAIP,SMN2	-2671,-2671,-102895
chr5:70323555-70324008	chr5	-	68895713	68895884	False	NR_027439,NM_001042490	chr5,chr5	-,+	LOC100272216,GTF2H2D	33202,-39691
chr5:70323555-70324008	chr5	-	69750856	69751027	False	NR_033417,NR_033968	chr5,chr5	+,-	GTF2H2B,LOC100049076	-39711,100181
chrX:33346606-33346976	chrX	+	33346608	33347029	True	NM_152631,NM_000109	chrX,chrX	+,-	FAM47B,DMD	1613883,10754
chr17:39402096-39403190	chr17	+	39402291	39403197	True	NM_030975,NM_031963,NM_033191,NM_033060	chr17,chr17,chr17,chr17	+,+,+,-	KRTAP9-9,KRTAP9-8,KRTAP9-4,KRTAP4-1	8438,-8072,2741,-61144
chr9:132805039-132805313	chr9	+	132805038	132805246	True	NM_001136557,NM_015033	chr9,chr9	+,-	GPR107,FNBP1	10738,277
chr1:38062880-38064463	chr1	+	38063309	38064155	True	NM_013285,NM_003462	chr1,chr1	-,+	GNL2,DNALI1	-1723,-40840
chr19:22823055-22824686	chr19	+	22823299	22824515	True	NM_020855,NM_001080409	chr19,chr19	+,-	ZNF492,ZNF99	-6230,128319
chr7:101270291-101270852	chr7	+	101270647	101270901	True	NM_138403,NM_001202543	chr7,chr7	-,+	MYL10,CUX1	1725,188282
chr2:133040659-133040988	chr2	+	133040712	133040966	True	NM_001508,NR_027020	chr2,chr2	+,-	GPR39,ANKRD30BL	133180,-25170
chr18:67596970-67597678	chr18	+	67596991	67597713	True	NM_006566,NM_004232	chr18,chr18	-,+	CD226,SOCS6	26569,358423
chr19:7796935-7797167	chr19	+	7796978	7797118	True	NM_198492,NM_001144904	chr19,chr19	-,+	CLEC4G,CLEC4M	-11,30916
chr1:153329084-153329424	chr1	+	153329090	153329312	True	NM_020393,NM_002965	chr1,chr1	-,+	PGLYRP4,S100A9	-8068,1017
chr20:29957486-29958778	chr20	+	29957535	29958482	True	NM_153289,NM_054112	chr20,chr20	-,+	DEFB119,DEFB118	19975,-1177
chr7:29874427-29875481	chr7	+	29874442	29875410	True	NM_001080529,NR_027347	chr7,chr7	+,-	WIPF3,LOC100271874	-162,-149005
chr1:182808324-182808607	chr1	+	182808329	182808569	True	NM_030933,NM_001357,NR_033302	chr1,chr1,chr1	-,+,+	SHCBP1L,DHX9,DHX9	114034,59,59
chr16:31121144-31121442	chr16	+	31121174	31121454	True	NM_001122957,NM_032188,NM_182958,NM_206824,NM_005881	chr16,chr16,chr16,chr16,chr16	+,+,+,-,+	BCKDK,MYST1,MYST1,VKORC1,BCKDK	-1563,7530,7530,-14898,-1563
chr6:76122208-76123718	chr6	+	76122312	76123727	True	NM_015687,NM_001100409	chr6,chr6	-,+	FILIP1,SENP6	79819,187894
chr22:31534124-31534753	chr22	+	31534318	31534734	True	NM_015715,NM_001002837	chr22,chr22	-,+	PLA2G3,INPP5J	1785,-15408
chr4:25515657-25516320	chr4	+	25515781	25516070	True	NM_015187,NM_013367	chr4,chr4	-,+	SEL1L3,ANAPC4	348593,-136991
chrX:53482959-53483351	chrX	+	53483125	53483400	True	NM_001031745,NM_004493	chrX,chrX	+,-	RIBC1,HSD17B10	-33300,-21802
chr16:32894664-32894930	chr16	+	32894806	32894968	True	NR_003083,NM_016212	chr16,chr16	-,+	SLC6A10P,TP53TG3	1545,310011
chr16:32894664-32894930	chr16	-	33780355	33780517	False	NR_033866,NM_001205265	chr16,chr16	-,+	LOC390705,TP53TG3B	-481653,-518286
chr15:66585563-66585766	chr15	+	66585612	66585704	True	NM_133375,NM_001143688,NM_032445	chr15,chr15,chr15	+,+,-	DIS3L,DIS3L,MEGF11	-30,215,-39537
chr1:7914125-7915535	chr1	+	7914639	7915372	True	NM_006786,NM_021995,NM_016831	chr1,chr1,chr1	-,-,+	UTS2,UTS2,PER3	-1535,-1088,-69937
chr10:60027627-60027831	chr10	+	60027745	60027837	True	NM_018464,NM_152230	chr10,chr10	+,-	CISD1,IPMK	1057,-51
chr19:3366064-3366519	chr19	+	3366268	3366527	True	NM_005597,NM_001136503,NM_205843	chr19,chr19,chr19	+,-,+	NFIC,C19orf77,NFIC	45,114063,-6703
chr4:146599542-146601510	chr4	+	146600666	146601511	True	NM_001080531,NM_178835	chr4,chr4	+,-	C4orf51,ZNF827	-24,258146
chr5:140855111-140855413	chr5	+	140855145	140855451	True	NM_002588,NM_018928,NM_001079812,NM_032406,NM_032402,NM_032403	chr5,chr5,chr5,chr5,chr5,chr5	+,+,-,+,+,+	PCDHGC3,PCDHGC4,DIAPH1,PCDHGC4,PCDHGC3,PCDHGC3	117,9289,143221,9289,117,117
chr11:117070490-117072205	chr11	+	117070621	117072058	True	NM_003186,NM_001001522,NM_004716	chr11,chr11,chr11	+,+,-	TAGLN,TAGLN,PCSK7	-632,-632,30803
chr10:35931816-35932247	chr10	+	35932043	35932247	True	NM_153368,NM_031866	chr10,chr10	+,-	GJD4,FZD8	-37758,-1681
chrX:122864648-122865648	chrX	+	122864940	122865695	True	NM_001204401,NM_001081550	chrX,chrX	+,-	XIAP,THOC2	127966,1259
chr11:67204128-67204665	chr11	+	67204167	67204425	True	NM_020441,NM_001018070,NM_003952,NM_005608	chr11,chr11,chr11,chr11	-,-,+,-	CORO1B,CORO1B,RPS6KB2,PTPRCAP	6608,6888,-8283,778
chr3:49821932-49822660	chr3	+	49822410	49822582	True	NM_153273,NM_001006115,NM_203370	chr3,chr3,chr3	-,-,+	IP6K1,IP6K1,C3orf54	1441,1441,18104
chr11:118273711-118274134	chr11	+	118273739	118273952	True	NR_033759,NM_001040651,NM_006476	chr11,chr11,chr11	+,-,+	ATP5L,CD3D,ATP5L	-1686,-60280,-1686
chr6:84421045-84422804	chr6	+	84421232	84422433	True	NR_026669,NM_014841,NM_001009994	chr6,chr6,chr6	-,-,+	SNAP91,SNAP91,RIPPLY2	-2105,-2105,140551
chr6:46703203-46703420	chr6	+	46703268	46703464	True	NM_001162435,NM_001168357,NM_005084	chr6,chr6,chr6	+,-,-	LOC100287718,PLA2G7,PLA2G7	11189,16,-117
chr3:68961801-68962544	chr3	+	68961817	68962573	True	NM_006407,NM_001005527	chr3,chr3	+,-	ARL6IP5,FAM19A4	171516,19188
chr7:102777678-102778059	chr7	+	102777697	102778099	True	NR_026660,NM_031905	chr7,chr7	-,+	RPL19P12,ARMC10	4809,-62430
chr7:143882393-143884175	chr7	+	143884007	143884133	True	NM_001003702,NM_198495	chr7,chr7	-,+	ARHGEF35,CTAGE4	8708,-3521
chr19:38180628-38182034	chr19	+	38180815	38181921	True	NM_001172226,NM_152605	chr19,chr19	+,-	ZNF540,ZNF781	-95135,1355
chrX:102529364-102530800	chrX	+	102529733	102530842	True	NM_152278,NM_001012979	chrX,chrX	+,-	TCEAL7,TCEAL5	54271,1006
chrX:53254061-53254418	chrX	+	53254100	53254296	True	NM_004187,NM_022117,NM_001146702	chrX,chrX,chrX	-,+,-	KDM5C,TSPYL2,KDM5C	358,-142609,358
chr16:31522017-31523125	chr16	+	31522079	31523125	True	NM_022744,NM_016633	chr16,chr16	-,+	C16orf58,AHSP	-2373,16077
chr17:18965496-18965725	chr17	+	18965511	18965597	True	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	65184,-15175
chr17:18965496-18965725	chr17	-	19015610	19015662	False	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	15119,-65274
chr4:77228568-77228786	chr4	+	77228568	77228824	True	NM_003943,NM_005506	chr4,chr4	+,-	STBD1,SCARB2	-942,-93516
chr12:12893344-12894441	chr12	+	12893350	12894125	True	NM_001130415,NM_006143	chr12,chr12	+,-	APOLD1,GPR19	-14550,-44229
chrX:53348125-53348344	chrX	+	53348194	53348374	True	NM_001111125,NM_144968	chrX,chrX	-,+	IQSEC2,RIBC1	2198,101464
chr5:139555818-139556508	chr5	+	139555849	139556362	True	NM_002622,NM_032412	chr5,chr5	-,+	PFDN1,C5orf32	126384,-1247
chr19:10737180-10738641	chr19	+	10738245	10738629	True	NM_020428,NR_024333	chr19,chr19	+,-	SLC44A2,LOC147727	-2131,25969
chr14:29233856-29234669	chr14	+	29233890	29234492	True	NM_002742,NR_026731,NR_026732,NM_005249	chr14,chr14,chr14,chr14	-,+,+,+	PRKD1,C14orf23,C14orf23,FOXG1	1162457,7417,7417,1794
chr16:74352356-74352808	chr16	+	74352483	74352809	True	NR_026950,NM_002811	chr16,chr16	-,+	LOC283922,PSMD7	49394,-21861
chrX:40499071-40499919	chrX	+	40499082	40499852	True	NM_144970,NM_001195522	chrX,chrX	-,+	CXorf38,LOC347411	7017,-16315
chr2:215673994-215674208	chr2	+	215673997	215674253	True	NM_000465,NM_001080500	chr2,chr2	-,+	BARD1,VWC2L	225,-397587
chr6:43335686-43336447	chr6	+	43335887	43336305	True	NM_014345,NM_001198934	chr6,chr6	-,+	ZNF318,ABCC10	926,58986
chr10:98064301-98065891	chr10	+	98064436	98065806	True	NM_001017520,NM_013314,NM_004088	chr10,chr10,chr10	+,-,+	DNTT,BLNK,DNTT	-405,-33103,-405
chr11:71250007-71250466	chr11	+	71250061	71250435	True	NM_021046,NM_005553,NM_001005405	chr11,chr11,chr11	+,+,-	KRTAP5-8,KRTAP5-9,KRTAP5-11	-1043,9030,43536
chr9:126693650-126694860	chr9	+	126693669	126694417	True	NM_004789,NM_020946,NM_024820	chr9,chr9,chr9	+,-,-	LHX2,DENND1A,DENND1A	79471,-1252,-1252
chr17:81008168-81008584	chr17	+	81008368	81008553	True	NM_001004431	chr17	+	METRNL	29013
chr1:205720975-205722286	chr1	+	205721227	205721837	True	NM_022731,NM_181644	chr1,chr1	-,+	NUCKS1,MFSD4	-1855,-183172
chr6:79718610-79720597	chr6	+	79718647	79720615	True	NM_001010844,NM_017934	chr6,chr6	+,-	IRAK1BP1,PHIP	-141517,67449
chr14:75082391-75082759	chr14	+	75082461	75082701	True	NM_015962,NM_000428	chr14,chr14	+,-	FCF1,LTBP2	97148,-3427
chr21:47647654-47647965	chr21	+	47647657	47647877	True	NR_002776,NM_002340,NM_001145436,NM_001001438,NM_001145437	chr21,chr21,chr21,chr21,chr21	+,-,-,-,-	MCM3AP-AS1,LSS,LSS,LSS,LSS	1280,911,911,911,911
chr1:225637362-225638138	chr1	+	225637370	225637941	True	NM_194442,NM_001130440	chr1,chr1	-,+	LBR,SRP9	-20813,327573
chr17:30265132-30266842	chr17	+	30265132	30266315	True	NM_018428,NM_015355	chr17,chr17	-,+	UTP6,SUZ12	-36403,-1145
chr12:120703685-120703975	chr12	+	120703791	120703997	True	NM_001080855,NM_002859,NM_012240	chr12,chr12,chr12	-,-,+	PXN,PXN,SIRT4	-228,-228,36126
chr17:55042008-55042693	chr17	+	55042397	55042701	True	NM_004645,NM_021626	chr17,chr17	-,+	COIL,SCPEP1	-3986,12766
chr9:135994739-135994978	chr9	+	135994799	135995027	True	NR_001275,NM_006266	chr9,chr9	+,-	CELP,RALGDS	-36924,1584
chr19:6992744-6993754	chr19	+	6992990	6993762	True	NR_024075,NM_001136507	chr19,chr19	-,+	EMR4P,MBD3L5	-2133,36831
chr17:19312607-19313754	chr17	+	19312756	19313800	True	NM_002404,NM_007148	chr17,chr17	-,+	MFAP4,RNF112	-22224,690
chr14:93804518-93805736	chr14	+	93804691	93805634	True	NM_020818,NM_182971,NM_018167,NM_001002860	chr14,chr14,chr14,chr14	+,+,-,-	KIAA1409,COX8C,BTBD7,BTBD7	-5179,7902,-5306,-5306
chr6:32096079-32096597	chr6_mcf_hap5	+	3475914	3476368	False	NM_001136153,NM_138717,NM_004381,NM_022110	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	-,+,-,-	ATF6B,PPT2,ATF6B,FKBPL	-69,24683,-69,1577
chr6:32096079-32096597	chr6_dbb_hap3	+	3375258	3375712	False	NM_001136153,NM_138717,NM_004381,NM_022110	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	-,+,-,-	ATF6B,PPT2,ATF6B,FKBPL	-69,24689,-69,1577
chr6:32096079-32096597	chr6	+	32096086	32096540	True	NM_001136153,NM_138717,NM_004381,NM_022110	chr6,chr6,chr6,chr6	-,+,-,-	ATF6B,PPT2,ATF6B,FKBPL	-69,24688,-69,1577
chr6:32096079-32096597	chr6_cox_hap2	+	3566746	3567200	False	NM_001136153,NM_138717,NM_004381,NM_022110	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	-,+,-,-	ATF6B,PPT2,ATF6B,FKBPL	-69,24696,-69,1577
chr6:42927003-42927839	chr6	+	42927267	42927669	True	NM_018960,NM_000287	chr6,chr6	+,-	GNMT,PEX6	830,19362
chr17:6856685-6857943	chr17	+	6856906	6857980	True	NM_000697,NR_029712	chr17,chr17	+,-	ALOX12,MIR195	41403,63096
chr16:10523800-10524542	chr16	+	10524172	10524582	True	NM_024997,NM_001424	chr16,chr16	+,-	ATF7IP2,EMP2	-1509,150007
chr14:60714874-60715498	chr14	+	60714879	60715231	True	NM_177951,NM_177952,NM_016029,NM_021003	chr14,chr14,chr14,chr14	+,+,-,+	PPM1A,PPM1A,DHRS7,PPM1A	734,-2460,-82668,734
chr1:111742148-111742489	chr1	+	111742233	111742493	True	NM_024901,NM_001025197	chr1,chr1	-,+	DENND2D,CHI3L2	838,27787
chr10:102732898-102733826	chr10	+	102733060	102733522	True	NM_001203244,NM_176792,NR_030339,NM_017893	chr10,chr10,chr10,chr10	+,-,+,+	SEMA4G,MRPL43,MIR608,SEMA4G	-825,13800,1219,-825
chr4:103193518-103193999	chr4	+	103193614	103193896	True	NM_001135148,NM_001165412	chr4,chr4	-,+	SLC39A8,NFKB1	51623,228589
chr14:98629489-98629915	chr14	+	98629493	98629933	True	NR_015430,NM_182560	chr14,chr14	-,+	C14orf64,C14orf177	-185032,548016
chr5:64919556-64919758	chr5	+	64919561	64919803	True	NM_024941,NM_001656,NM_033228,NM_001093756,NM_001093755,NR_003545,NM_033227	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,-,-,+,+,+,-	C5orf44,TRIM23,TRIM23,C5orf44,C5orf44,C5orf44,TRIM23	754,434,434,754,754,754,434
chr6:11784014-11785735	chr6	+	11784044	11785751	True	NM_001143948,NM_032744,NM_002114	chr6,chr6,chr6	-,-,+	C6orf105,C6orf105,HIVEP1	-4764,-4764,226972
chr7:33168915-33169463	chr7	+	33168962	33169508	True	NM_001033605,NM_001033604,NM_014451,NM_203288,NM_198428	chr7,chr7,chr7,chr7,chr7	+,+,+,-,+	BBS9,BBS9,BBS9,RP9,BBS9	-19,-19,-19,-19960,-19
chr22:29168336-29168609	chr22	+	29168405	29168645	True	NM_173510,NM_001079539	chr22,chr22	+,-	CCDC117,XBP1	16,27965
chr16:58229521-58231264	chr16	+	58229521	58231211	True	NM_001142302,NM_001896	chr16,chr16	+,-	CCDC113,CSNK2A2	52628,621
chr10:104402568-104402892	chr10	+	104402661	104402883	True	NM_030912,NM_004311	chr10,chr10	+,-	TRIM8,ARL3	1368,71357
chr11:124631664-124631965	chr11	+	124631807	124631935	True	NM_138961,NM_006176,NM_014312	chr11,chr11,chr11	-,+,-	ESAM,NRGN,VSIG2	338,-22029,-9698
chrX:13942320-13942571	chrX	+	13942319	13942411	True	NM_001001994,NM_003611	chrX,chrX	-,+	GPM6B,OFD1	14480,-189547
chr8:56365126-56365932	chr8	+	56365147	56365881	True	NR_027765,NM_024831	chr8,chr8	-,+	SBF1P1,TGS1	2050,319909
chr17:61973626-61973937	chr17	+	61973717	61973977	True	NM_022641,NM_022640,NR_002947,NM_001317	chr17,chr17,chr17,chr17	-,-,+,-	CSH1,CSH1,TCAM1P,CSH1	94,94,-39392,94
chr17:61973626-61973937	chr17	+	61950820	61951080	False	NM_020991,NM_022645,NM_022644,NM_022557,NM_022556,NR_002947,NM_002059,NM_022558	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,+,-,-	CSH2,CSH2,CSH2,GH2,GH2,TCAM1P,GH2,GH2	59,59,59,8193,8193,-16495,8193,8193
chr2:26867623-26868501	chr2	+	26867679	26868518	True	NM_002246,NM_001029881	chr2,chr2	+,-	KCNK3,CIB4	47062,-3468
chr11:57296060-57296369	chr11	+	57296100	57296309	True	NM_012456,NM_001105565	chr11,chr11	-,+	TIMM10,SMTNL1	1973,13804
chrX:131556841-131557153	chrX	+	131556933	131557191	True	NM_001042452,NM_001170701,NM_001170702,NM_001170703	chrX,chrX,chrX,chrX	+,-,-,-	MST4,MBNL3,MBNL3,MBNL3	-399348,-9330,-9330,-9297
chr4:164394439-164394673	chr4	+	164394438	164394718	True	NM_032136,NM_018352	chr4,chr4	-,+	TKTL2,C4orf43	379,20954
chr17:77019689-77019948	chr17	+	77019698	77019924	True	NM_198594,NM_030968,NM_138793	chr17,chr17,chr17	+,+,-	C1QTNF1,C1QTNF1,CANT1	326,326,-13799
chr7:56119839-56120368	chr7	+	56119846	56120325	True	NM_001762,NM_004577,NR_002957,NM_001009186	chr7,chr7,chr7,chr7	+,-,+,+	CCT6A,PSPH,SNORA15,CCT6A	-519,-578,7837,-519
chr10:124137699-124138106	chr10	+	124137704	124137978	True	NM_001001974,NM_001010912,NM_001195608	chr10,chr10,chr10	+,-,+	PLEKHA1,C10orf120,PLEKHA1	-3664,321419,7606
chr5:98106610-98106855	chr5	+	98106625	98106871	True	NM_001012761,NR_033932	chr5,chr5	+,-	RGMB,FLJ35946	-1684,1967
chr11:101424193-101424811	chr11	+	101424264	101424849	True	NM_020802,NM_004621	chr11,chr11	+,-	KIAA1377,TRPC6	360896,29861
chrX:53714846-53715811	chrX	+	53714845	53715824	True	NM_031407,NM_001031745	chrX,chrX	-,+	HUWE1,RIBC1	-1172,-265007
chr12:23721067-23721842	chr12	+	23721142	23721664	True	NR_030625,NM_178010	chr12,chr12	+,-	MIR920,SOX5	643690,15894
chr21:45681875-45682542	chr21	+	45682347	45682407	True	NM_000383,NM_175867,NM_013369	chr21,chr21,chr21	+,-,-	AIRE,DNMT3L,DNMT3L	23355,-248,-248
chr22:21988361-21988615	chr22	+	21988384	21988542	True	NM_152612,NM_001017964,NM_022044	chr22,chr22,chr22	+,-,+	CCDC116,YDJC,SDF2L1	-1349,-4044,7999
chr6:143832395-143832774	chr6	+	143832396	143832640	True	NM_032020,NM_003630	chr6,chr6	-,+	FUCA2,PEX3	430,-60529
chr11:18066658-18067691	chr11	+	18066739	18067708	True	NM_054031,NM_004179	chr11,chr11	+,-	MRGPRX3,TPH1	74793,-4404
chr20:1182442-1184364	chr20	+	1182770	1184239	True	NM_018354,NM_001009612	chr20,chr20	-,+	C20orf46,C20orf202	-17653,134
chr15:75628697-75630407	chr15	+	75628804	75630450	True	NR_030360,NM_024608,NM_017828	chr15,chr15,chr15	-,+,+	MIR631,NEIL1,COMMD4	15626,8880,-482
chr6:56489216-56490032	chr6	+	56489249	56490074	True	NM_152731,NM_015548	chr6,chr6	+,-	BEND6,DST	329698,17677
chr10:99617645-99618530	chr10	+	99617797	99618484	True	NM_003015,NM_001010917	chr10,chr10	-,+	SFRP5,GOLGA7B	-86041,-7852
chr10:50121546-50121879	chr10	+	50121562	50121906	True	NM_020945,NM_001006939	chr10,chr10	+,-	WDFY4,LRRC18	-228095,424
chr5:169931940-169932179	chr5	+	169931939	169932215	True	NM_001034837,NM_004137,NM_014592	chr5,chr5,chr5	+,-,+	KCNIP1,KCNMB1,KCNIP1	-942,-115301,-942
chr4:71708243-71708679	chr4	+	71708355	71708679	True	NM_001098477,NM_173468,NM_002092	chr4,chr4,chr4	-,+,-	GRSF1,MOBKL1A,GRSF1	-3135,59384,-2728
chr4:123324443-123326109	chr4	+	123324905	123326162	True	NM_000586,NM_001159295	chr4,chr4	-,+	IL2,ADAD1	51545,-24361
chr10:102668458-102668800	chr10	+	102668503	102668841	True	NM_001136123,NR_024245,NM_018121,NM_176792	chr10,chr10,chr10,chr10	+,+,+,-	FAM178A,FAM178A,FAM178A,MRPL43	3484,3484,3484,78485
chr11:111130131-111130471	chr11	+	111130460	111130522	True	NM_198498,NR_034154	chr11,chr11	+,-	C11orf53,C11orf92	-3804,40069
chr19:8565190-8567023	chr19	+	8565427	8567057	True	NM_032152,NM_031203	chr19,chr19	-,+	PRAM1,HNRNPM	531,-55675
chr22:51066935-51067929	chr22	+	51066975	51067611	True	NM_000487,NM_016431,NM_001085428,NM_001085426,NM_001085427,NM_001085425	chr22,chr22,chr22,chr22,chr22,chr22	-,+,-,-,-,-	ARSA,MAPK8IP2,ARSA,ARSA,ARSA,ARSA	-374,-25464,-374,-374,-374,-374
chr6:151777016-151777610	chr6	+	151777314	151777633	True	NM_017909,NM_024573	chr6,chr6	-,+	RMND1,C6orf211	-3998,-3949
chr7:7221584-7222071	chr7	+	7221619	7221983	True	NM_020156,NR_034022	chr7,chr7	+,-	C1GALT1,LOC100131257	262,-85202
chr12:110437682-110437924	chr12	+	110437706	110437944	True	NM_057169,NM_014776,NM_033121,NM_057170,NM_001135213,NM_139201,NM_001135214	chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,-,+,-,-,-,-	GIT2,GIT2,ANKRD13A,GIT2,GIT2,GIT2,GIT2	-3512,-3512,-522,-3512,-3512,-3512,-3512
chr1:35220984-35221186	chr1	+	35221114	35221176	True	NM_001164824,NM_153212,NM_005268	chr1,chr1,chr1	-,+,+	C1orf212,GJB4,GJB5	103520,4165,-444
chr11:119204545-119204950	chr11	+	119204587	119204981	True	NM_015645,NM_032015	chr11,chr11	-,+	C1QTNF5,RNF26	12452,255
chr2:234197365-234198381	chr2	+	234197488	234198399	True	NR_003006,NM_018218	chr2,chr2	+,-	SCARNA6,USP40	-217,275887
chr10:135269214-135269549	chr10	+	135269267	135269461	True	NR_002934,NM_001012508	chr10,chr10	+,-	LOC619207,SPRN	-1886,-31146
chr1:197623460-197624752	chr1	+	197623761	197624567	True	NM_001195215,NM_001024594	chr1,chr1	-,+	DENND1B,C1orf53	120114,247114
chr19:55689659-55690111	chr19	+	55689773	55690102	True	NM_017729,NM_003180	chr19,chr19	+,-	EPS8L1,SYT5	-98064,1669
chr20:30556119-30556344	chr20	+	30556158	30556342	True	NM_030815,NM_001011718	chr20,chr20	-,+	PDRG1,XKR7	-16275,-404
chr2:33124853-33125345	chr2	+	33125159	33125285	True	NR_027100,NM_021209	chr2,chr2	+,-	LOC285045,NLRC4	-17350,-634347
chr19:50846742-50847562	chr19	+	50847055	50847213	True	NM_007121,NR_002798	chr19,chr19	+,-	NR1H2,NAPSB	32471,842
chr3:130771862-130772172	chr3	+	130771861	130772130	True	NM_014065,NM_024800	chr3,chr3	-,+	ASTE1,NEK11	-26215,-26218
chr8:63952124-63952612	chr8	+	63952182	63952601	True	NR_027378,NM_003878	chr8,chr8	+,-	LOC643763,GGH	-61826,-572
chr5:24268820-24269834	chr5	+	24268943	24269876	True	NM_020227,NM_006727	chr5,chr5	+,-	PRDM9,CDH10	-761271,375270
chr2:46933175-46933938	chr2	+	46933176	46933849	True	NM_144949,NM_173074,NM_014011	chr2,chr2,chr2	+,-,+	SOCS5,PIGF,SOCS5	-6884,-88925,-7134
chr12:52696123-52697770	chr12	+	52696250	52697750	True	NM_002284,NM_002281	chr12,chr12	+,-	KRT86,KRT81	-652,-10951
chr12:52696123-52697770	chr12	-	52683203	52684699	False	NM_002284,NM_002281	chr12,chr12	+,-	KRT86,KRT81	10949,650
chr19:33574874-33575725	chr19	+	33575101	33575555	True	NM_033103,NM_018025	chr19,chr19	-,+	RHPN2,GPATCH1	-19277,-3373
chrX:129268663-129269220	chrX	+	129268678	129268822	True	NM_001130846,NM_004794	chrX,chrX	-,+	AIFM1,RAB33A	3251,36950
chrX:102340685-102341033	chrX	+	102340859	102340936	True	NM_001127688,NM_022052	chrX,chrX	+,-	BEX4,NXF3	129083,7137
chr12:122656813-122657186	chr12	+	122656867	122657197	True	NM_001014336,NM_152759	chr12,chr12	-,+	IL31,LRRC43	1599,-4652
chr20:58583925-58585902	chr20	+	58584419	58585527	True	NM_021810,NM_006242	chr20,chr20	+,-	CDH26,PPP1R3D	-13053,-69067
chr1:52870287-52870838	chr1	+	52870369	52870867	True	NM_032864,NM_004153,NM_001190818,NM_001190819	chr1,chr1,chr1,chr1	+,-,-,-	PRPF38A,ORC1,ORC1,ORC1	-206,-226,-226,-226
chr9:117091690-117092265	chr9	+	117091751	117092283	True	NM_000607,NM_000608,NM_030767	chr9,chr9,chr9	+,+,-	ORM1,ORM2,AKNA	-6499,-51,64452
chr9:117091690-117092265	chr9	+	117085084	117085512	False	NM_000607,NM_000608,NM_030767	chr9,chr9,chr9	+,+,-	ORM1,ORM2,AKNA	-46,6556,71223
chr1:149982750-149983072	chr1	+	149982844	149983120	True	NM_007259,NM_020205	chr1,chr1	+,-	VPS45,OTUD7B	56221,-158
chr9:125706154-125706940	chr9	+	125706258	125706796	True	NM_012197,NM_020924	chr9,chr9	+,-	RABGAP1,ZBTB26	-3027,-12479
chr12:63317272-63318388	chr12	+	63317634	63318357	True	NR_029661,NM_020700	chr12,chr12	+,-	MIRLET7I,PPM1H	-320220,10371
chr12:132514920-132516191	chr12	+	132514924	132516088	True	NM_175066,NR_002979	chr12,chr12	-,+	DDX51,SNORA49	112842,4
chr18:43299451-43299752	chr18	+	43299505	43299749	True	NM_015865,NM_001146037,NM_001146036,NM_020964,NM_001128588	chr18,chr18,chr18,chr18,chr18	+,+,+,-,+	SLC14A1,SLC14A1,SLC14A1,EPG5,SLC14A1	4342,7168,4342,247606,4342
chr1:101003201-101004008	chr1	+	101003227	101004008	True	NM_022049,NM_001918	chr1,chr1	+,-	GPR88,DBT	19,-287818
chr11:60674733-60675388	chr11	+	60674738	60675420	True	NM_014502,NM_024092	chr11,chr11	-,+	PRPF19,TMEM109	-677,5950
chr8:11626767-11627017	chr8	+	11626912	11627008	True	NM_001135747,NM_001135746,NM_145043,NM_001908,NM_001135748	chr8,chr8,chr8,chr8,chr8	+,+,+,-,+	NEIL2,NEIL2,NEIL2,CTSB,NEIL2	163,163,163,98688,163
chr10:79789360-79789651	chr10	+	79789404	79789692	True	NM_001026,NM_007055,NM_001142282,NM_001142283,NM_001142284,NM_033022,NM_001142285	chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,-,+,+,+,+,+	RPS24,POLR3A,RPS24,RPS24,RPS24,RPS24,RPS24	3825,-106,3825,3825,3825,3825,3825
chr17:1588376-1588624	chr17	+	1588375	1588507	True	NM_001163673,NM_006445	chr17,chr17	+,-	WDR81,PRPF8	31309,-199
chr19:41099189-41099622	chr19	+	41099537	41099671	True	NM_001042544,NM_003573,NM_004756,NM_001042545	chr19,chr19,chr19,chr19	+,+,-,+	LTBP4,LTBP4,NUMBL,LTBP4	3469,-517,96935,7605
chr9:34382320-34383010	chr9	+	34382647	34382987	True	NM_147168,NM_147169,NM_020702,NM_147173	chr9,chr9,chr9,chr9	-,-,-,+	C9orf24,C9orf24,KIAA1161,NUDT2	-1049,-1049,-5753,-53195
chr11:61735842-61736078	chr11	+	61735856	61735958	True	NM_004183,NM_002032	chr11,chr11	+,-	BEST1,FTH1	-18551,-724
chr5:43121084-43121328	chr5	+	43121198	43121356	True	NM_003432,NR_034127	chr5,chr5	+,-	ZNF131,LOC100132356	285,-54125
chr8:142238792-142239036	chr8	+	142238909	142238977	True	NM_014957,NM_001080431	chr8,chr8	+,-	DENND3,SLC45A4	-100247,-236
chr2:109066131-109066770	chr2	+	109066134	109066814	True	NR_028063,NM_022336,NM_181453	chr2,chr2,chr2	+,-,+	GCC2,EDAR,GCC2	-608,539071,-608
chr14:95110513-95110870	chr14	+	95110660	95110868	True	NM_173849,NR_015340	chr14,chr14	-,+	GSC,SERPINA13	125681,-3649
chr14:65008243-65008521	chr14	+	65008284	65008494	True	NM_006977,NM_021979,NM_172365	chr14,chr14,chr14	-,+,+	ZBTB25,HSPA2,C14orf50	-37730,-1149,8125
chr17:41911105-41912541	chr17	+	41911172	41911946	True	NR_003562,NM_001168324,NM_001932	chr17,chr17,chr17	-,+,-	MPP3,CD300LG,MPP3	-625,12569,-625
chr19:44615497-44616047	chr19	+	44615623	44616048	True	NM_013362,NR_033341	chr19,chr19	+,-	ZNF225,LOC100379224	1499,1339
chr9:123637814-123638520	chr9	+	123637821	123638399	True	NM_015651,NR_024408,NM_001009936	chr9,chr9,chr9	-,+,-	PHF19,LOC253039,PHF19	1257,-32552,1257
chr8:92188037-92188666	chr8	+	92188062	92188722	True	NM_001129890,NM_134266,NM_018710	chr8,chr8,chr8	+,+,-	LRRC69,SLC26A7,TMEM55A	-73280,72793,-134859
chr19:48458550-48458938	chr19	+	48458885	48458961	True	NR_024219,NR_024220,NM_001128326,NR_024217,NR_024221	chr19,chr19,chr19,chr19,chr19	+,+,-,+,+	SNAR-C5,SNAR-C1,BSPH1,SNAR-C2,SNAR-C3	1,1,36516,1,-5383
chr19:48458550-48458938	chr19	+	48416254	48416330	False	NR_024219,NR_024220,NR_024217,NR_024216,NM_003167,NR_004437,NR_004436,NR_004435	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,-,+,+,+	SNAR-C5,SNAR-C1,SNAR-C2,SNAR-A13,SULT2A1,SNAR-A12,SNAR-A2,SNAR-A1	1,1,1,-5370,-26600,-5370,5355,5355
chr19:48458550-48458938	chr19	+	48453499	48453551	False	NR_024219,NR_024221,NR_024217,NR_024216,NR_024220,NR_004437,NM_001128326	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,+,-	SNAR-C5,SNAR-C3,SNAR-C2,SNAR-A13,SNAR-C1,SNAR-A12,BSPH1	5387,1,5387,-5371,5387,-5371,41926
chr19:48458550-48458938	chr19	+	48432039	48432097	False	NR_024219,NR_024220,NR_024223,NR_024224,NR_024225,NR_024226,NR_024227,NR_024228,NR_024229,NR_024215,NR_024214,NR_024217,NM_003167,NR_004436,NR_004435,NR_024242	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,+,+,+,+,+,+,+,-,+,+,+	SNAR-C5,SNAR-C1,SNAR-A5,SNAR-A7,SNAR-A11,SNAR-A9,SNAR-A6,SNAR-A8,SNAR-A10,SNAR-A4,SNAR-A3,SNAR-C2,SULT2A1,SNAR-A2,SNAR-A1,SNAR-A14	-15,-15,-5054,-5054,-5054,-5054,-5054,-5054,-5054,-5054,-5054,-15,-42385,5340,5340,-5054
chr19:48458550-48458938	chr19	+	48442744	48442820	False	NR_024218,NR_024216,NR_004437,NM_001128326,NR_004435,NR_004436	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,-,+,+	SNAR-C4,SNAR-A13,SNAR-A12,BSPH1,SNAR-A1,SNAR-A2	1,5358,5358,52657,-5357,-5357
chr1:36564369-36564595	chr1	+	36564430	36564596	True	NM_005202,NM_017825	chr1,chr1	-,+	COL8A2,ADPRHL2	1304,-10028
chr4:1722340-1722574	chr4	+	1722482	1722552	True	NM_001127266,NM_006527,NM_006342,NM_138385	chr4,chr4,chr4,chr4	-,-,+,-	TMEM129,SLBP,TACC3,TMEM129	582,-8452,713,582
chr1:6259558-6259854	chr1	+	6259603	6259835	True	NM_000983,NM_207396	chr1,chr1	-,+	RPL22,RNF207	-4,6353
chr17:33389143-33390194	chr17	+	33389506	33389854	True	NM_017559,NM_001017368	chr17,chr17	+,-	FNDC8,RFFL	58776,963
chr16:1201489-1201799	chr16	+	1201578	1201732	True	NM_021098,NM_207419,NM_001005407	chr16,chr16,chr16	+,-,+	CACNA1H,C1QTNF8,CACNA1H	1508,-55334,1508
chr19:2942937-2943865	chr19	+	2943075	2943558	True	NM_021217,NM_001143986	chr19,chr19	-,+	ZNF77,TLE6	1461,33977
chr7:27531314-27531860	chr7	+	27531403	27531647	True	NM_152740,NM_001079864	chr7,chr7	-,+	HIBADH,TAX1BP1	171023,248090
chr17:8095102-8096467	chr17	+	8095125	8096153	True	NM_017622,NR_037447	chr17,chr17	-,+	C17orf59,MIR3676	-1561,-4684
chr8:42550192-42550760	chr8	+	42550455	42550793	True	NM_001199279,NM_000749	chr8,chr8	-,+	CHRNA6,CHRNB3	73186,1768
chr9:90341467-90341876	chr9	+	90341587	90341678	True	NM_001039803,NM_145918,NM_001912	chr9,chr9,chr9	-,+,+	CDK20,CTSL1,CTSL1	248068,-664,-664
chr2:177027523-177027726	chr2	+	177027604	177027698	True	NR_033979,NM_006898	chr2,chr2	-,+	LOC401022,HOXD3	26038,1106
chr5:35991977-35992254	chr5	+	35991979	35992294	True	NM_002185,NM_001171873,NM_152404	chr5,chr5,chr5	+,-,-	IL7R,UGT3A1,UGT3A1	-135040,8895,-444
chr6:150072375-150072913	chr6	+	150072509	150072612	True	NM_005389,NM_198887	chr6,chr6	+,-	PCMT1,NUP43	-1740,-4821
chr7:57508656-57509085	chr7	+	57508708	57509036	True	NR_030766,NM_001159279	chr7,chr7	-,+	LOC642006,ZNF716	-260845,846
chr1:17866730-17866956	chr1	+	17866902	17867004	True	NM_018125,NM_018715	chr1,chr1	+,-	ARHGEF10L,RCC2	-623,-100682
chr19:42262312-42262761	chr19	+	42262322	42262760	True	NM_002483,NM_006890	chr19,chr19	+,-	CEACAM6,CEACAM7	-2975,-70226
chr9:135995263-135996263	chr9	+	135995283	135996065	True	NR_001275,NM_006266	chr9,chr9	+,-	CELP,RALGDS	-37408,546
chr15:34781709-34782401	chr15	+	34781762	34782288	True	NM_175741,NR_036050	chr15,chr15	+,-	C15orf55,MIR1233-1	-143750,38334
chr3:66027474-66028455	chr3	+	66027535	66028371	True	NM_173471,NM_015520,NM_001033057,NM_004742	chr3,chr3,chr3,chr3	+,-,-,-	SLC25A26,MAGI1,MAGI1,MAGI1	90913,-3026,-3026,-3026
chr22:42375783-42376433	chr22	+	42375889	42376481	True	NM_024053,NM_145733,NM_019106	chr22,chr22,chr22	-,+,+	CENPM,SEPT3,SEPT3	-32741,-3009,-3009
chr18:77797743-77798253	chr18	+	77797906	77798302	True	NM_024805,NM_001171967,NM_006701	chr18,chr18,chr18	+,+,-	RBFA,RBFA,TXNL4A	-3624,-3624,-49374
chr5:139958688-139959958	chr5	+	139958993	139960006	True	NM_080670,NM_133174	chr5,chr5	+,-	SLC35A4,APBB3	-14630,-14804
chr15:78858251-78858647	chr15	+	78858372	78858676	True	NM_001166694,NM_000745	chr15,chr15	-,+	CHRNA3,CHRNA5	55011,-561
chr2:74687155-74687566	chr2	+	74687159	74687341	True	NM_001146158,NM_006302,NM_031288,NM_012477,NR_037849	chr2,chr2,chr2,chr2,chr2	-,-,+,+,+	MOGS,MOGS,INO80B,WBP1,INO80B-WBP1	5246,5246,-5060,-1683,-5060
chrX:105279413-105280884	chrX	+	105279469	105280496	True	NM_001171020,NM_000354	chrX,chrX	+,-	MUM1L1,SERPINA7	131801,2279
chr13:113634395-113635031	chr13	+	113634415	113635067	True	NM_024979,NR_034002	chr13,chr13	+,-	MCF2L,MCF2L-AS1	-811,-11463
chr10:43943596-43945532	chr10	+	43943783	43945014	True	NR_026693,NM_001098204	chr10,chr10	+,-	ZNF487P,HNRNPF	-11261,-39087
chr5:87522204-87522755	chr5	+	87522265	87522658	True	NM_153354,NM_022650	chr5,chr5	-,+	TMEM161B,RASA1	42066,-957554
chr2:31024393-31024899	chr2	+	31024518	31024914	True	NM_144575,NM_001002257	chr2,chr2	-,+	CAPN13,LCLAT1	5447,-354432
chr15:34518391-34519038	chr15	+	34518467	34518749	True	NM_024713,NM_016454	chr15,chr15	-,+	C15orf29,TMEM85	-16170,-1292
chr2:234543584-234545428	chr2	+	234544259	234545465	True	NM_019075,NM_018218	chr2,chr2	+,-	UGT1A10,USP40	92,-70023
chr17:48243673-48245003	chr17	+	48243712	48244830	True	NR_024192,NR_024193,NM_001135697,NM_000023	chr17,chr17,chr17,chr17	-,-,+,+	HILS1,HILS1,SGCA,SGCA	5057,5057,-397,-397
chr16:28858086-28859523	chr16	+	28858086	28858851	True	NM_003321,NM_001145795	chr16,chr16	-,+	TUFM,SH2B1	-357,16226
chr6:112021211-112022566	chr6	+	112021269	112022161	True	NR_034109,NM_153047	chr6,chr6	+,-	LOC643749,FYN	-216646,19161
chr6:160683927-160685070	chr6	+	160684012	160685107	True	NM_003058,NM_021977	chr6,chr6	-,+	SLC22A2,SLC22A3	-4049,84317
chr4:78980832-78982678	chr4	+	78980941	78982692	True	NM_025074,NM_144571,NM_001166133	chr4,chr4,chr4	+,-,+	FRAS1,CNOT6L,FRAS1	-2268,-240397,-2268
chr14:77430091-77431349	chr14	+	77430379	77431267	True	NM_024496,NM_033426	chr14,chr14	-,+	IRF2BPL,KIAA1737	63817,133310
chr15:42788806-42789650	chr15	+	42789151	42789217	True	NM_003825,NM_022473,NM_130798	chr15,chr15,chr15	+,-,+	SNAP23,ZFP106,SNAP23	-1380,-39421,-1380
chr2:25193425-25194163	chr2	+	25193796	25194011	True	NM_016544,NM_001198559,NR_034113	chr2,chr2,chr2	-,-,+	DNAJC27,DNAJC27,LOC729723	1003,1003,969
chr10:50384842-50385464	chr10	+	50384846	50385492	True	NM_001010863,NM_001135196	chr10,chr10	-,+	C10orf128,C10orf71	10965,121694
chr1:109009047-109010175	chr5	+	85588872	85588922	True	NR_003719,NR_036243	chr5,chr5	+,-	NBPF22P,MIR4280	-10661,821899
chr1:109009047-109010175	chr1	+	109009061	109010223	False	NM_001102592,NM_001143988	chr1,chr1	-,+	HENMT1,NBPF6	193571,-16211
chr10:2007069-2007308	chr10	+	2007139	2007287	True	NR_033387,NM_018702	chr10,chr10	+,-	NCRNA00168,ADARB2	-438365,-227421
chr17:5365503-5365922	chr17	+	5365692	5365950	True	NM_001199699,NM_020162,NM_024039	chr17,chr17,chr17	-,-,+	DHX33,DHX33,MIS12	6480,6480,24296
chr10:43277362-43277604	chr10	+	43277383	43277459	True	NM_014753,NM_006955	chr10,chr10	+,-	BMS1,ZNF33B	494,-143391
chr22:29277638-29278161	chr22	+	29277772	29278200	True	NM_005080,NM_032173	chr22,chr22	-,+	XBP1,ZNRF3	-81212,1689
chr19:55722018-55722875	chr19	+	55722826	55722920	True	NM_032430,NM_001161440,NM_002842	chr19,chr19,chr19	+,-,-	BRSK1,PTPRH,PTPRH	72613,-1952,-1952
chr3:111311732-111311962	chr3	+	111311777	111311963	True	NM_024508,NM_198196	chr3,chr3	-,+	ZBED2,CD96	2253,-50910
chr17:1467603-1468231	chr17	+	1467607	1467855	True	NM_006224,NR_028514	chr17,chr17	-,+	PITPNA,LOC100306951	-1497,-47445
chr1:13328909-13329327	chr1	+	13328916	13329308	True	NM_001013407,NM_001100631,NM_001013692	chr1,chr1,chr1	+,-,-	PRAMEF5,PRAMEF22,PRAMEF3	30510,2413,2434
chr1:13328909-13329327	chr1	-	13037905	13038297	False	NM_001100631,NM_001010889	chr1,chr1	+,-	PRAMEF22,PRAMEF6	-2413,-30499
chr19:45455189-45456175	chr19	+	45455376	45455683	True	NM_001646,NM_001294,NR_037932,NM_000483,NM_001199468,NM_145288	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,-	APOC4,CLPTM1,APOC4-APOC2,APOC2,CLPTM1,ZNF296	-9932,2915,-9932,-6188,2915,124060
chr20:62368401-62368693	chr20	+	62368423	62368663	True	NM_020062,NM_003224,NM_017806	chr20,chr20,chr20	+,-,+	SLC2A4RG,ARFRP1,LIME1	2547,-29068,-496
chr1:228136170-228136428	chr1	+	228136242	228136416	True	NM_033131,NM_003395	chr1,chr1	+,-	WNT3A,WNT9A	58306,-566
chr15:51606637-51607433	chr15	+	51606647	51607469	True	NM_000103,NM_181789	chr15,chr15	-,+	CYP19A1,GLDN	23376,26243
chr20:37055913-37056558	chr20	+	37055937	37056549	True	NR_015366,NR_027241,NR_002911,NR_003239,NR_003017,NR_002910,NR_003018	chr20,chr20,chr20,chr20,chr20,chr20,chr20	-,-,-,+,-,-,-	LOC388796,LOC388796,SNORA71A,SNHG11,SNORA71C,SNORA71B,SNORA71D	7463,7519,51,18747,1948,-1959,6143
chr20:37351781-37352436	chr20	+	37351818	37352400	True	NM_080552,NR_027241	chr20,chr20	+,-	SLC32A1,LOC388796	704,-287800
chr8:37595192-37595569	chr8	+	37595252	37595614	True	NR_003671,NM_007175,NM_001003790,NM_001003791	chr8,chr8,chr8,chr8	-,+,+,+	LOC728024,ERLIN2,ERLIN2,ERLIN2	10000,-1206,-1104,-1206
chr1:203596296-203597551	chr1	+	203596313	203597594	True	NM_002023,NM_001684,NM_001001396	chr1,chr1,chr1	-,+,+	FMOD,ATP2B4,ATP2B4	-276024,-436,-436
chr10:103879727-103879930	chr10	+	103879825	103879889	True	NM_001113407,NM_015062,NM_003893	chr10,chr10,chr10	-,+,-	LDB1,PPRC1,LDB1	371,12897,-5102
chr1:179712025-179712331	chr1	+	179712083	179712295	True	NM_173509,NM_001199260	chr1,chr1	+,-	FAM163A,TOR1AIP2	2,134696
chr20:30864727-30865347	chr20	+	30864884	30865394	True	NM_002657,NM_004798	chr20,chr20	-,+	PLAGL2,KIF3B	-69338,59
chr19:22193757-22194128	chr19	+	22193791	22194140	True	NM_007153,NM_033468	chr19,chr19	-,+	ZNF208,ZNF257	-46,41125
chr7:83204921-83205478	chr7	+	83204922	83205492	True	NM_001178129,NM_001127444	chr7,chr7	-,+	SEMA3E,CD36	65313,-2929211
chr19:10399014-10399437	chr19	+	10399167	10399435	True	NM_022377,NM_001544,NM_001039132,NM_003259,NM_001103167	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	ICAM4,ICAM4,ICAM4,ICAM5,ZGLP1	-1568,-1568,-1568,1219,20848
chr11:11626650-11626892	chr11	+	11626655	11626905	True	NM_198516,NM_017944	chr11,chr11	-,+	GALNTL4,USP47	16706,236064
chr19:15052713-15053479	chr19	+	15052744	15053292	True	NM_005071,NM_012377	chr19,chr19	-,+	SLC1A6,OR7C2	30488,-494
chr11:92929775-92930789	chr11	+	92930147	92930777	True	NM_152313,NM_181645	chr11,chr11	-,+	SLC36A4,CCDC67	368,133105
chr1:25255335-25255584	chr1	+	25255433	25255631	True	NM_013943,NM_004350	chr1,chr1	+,-	CLIC4,RUNX3	-183728,1189
chr1:37919892-37920787	chr1	+	37920370	37920832	True	NM_022756,NM_025079	chr1,chr1	-,+	MEAF6,ZC3H12A	59582,19286
chr12:65001398-65002192	chr12	+	65001474	65002053	True	NR_037515,NM_178169	chr12,chr12	-,+	MIR548Z,RASSF3	14393,2239
chr1:52832871-52834211	chr1	+	52833002	52834114	True	NM_032864,NM_032449	chr1,chr1	+,-	PRPF38A,CC2D1B	36104,-1125
chr1:95700270-95700693	chr1	+	95700270	95700457	True	NR_037643,NM_001199682,NM_015485,NM_001128142,NM_144988	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	RWDD3,RWDD3,RWDD3,RWDD3,ALG14	-610,-610,-610,-610,-161763
chr3:127310049-127310920	chr3	+	127310133	127310913	True	NM_004526,NM_001136053,NM_001142646	chr3,chr3,chr3	+,-,-	MCM2,TPRA1,TPRA1	6339,-637,-565
chrX:67864541-67866245	chrX	+	67864684	67866105	True	NM_014725,NM_002547,NM_001142503	chrX,chrX,chrX	+,-,+	STARD8,OPHN1,STARD8	1405,-211385,1405
chr10:27261812-27263360	chr10	+	27261876	27263271	True	NR_026795,NM_001172303	chr10,chr10	-,+	NCRNA00202,MASTL	-30946,180481
chr2:152142024-152142976	chr2	+	152142291	152143015	True	NM_004688,NM_007115	chr2,chr2	-,+	NMI,TNFAIP6	3465,71090
chr7:20705647-20707554	chr7	+	20705809	20707242	True	NM_178559,NM_182700	chr7,chr7	+,-	ABCB5,SP8	-18894,119317
chr11:56343855-56345710	chr11	+	56343877	56345718	True	NM_001004730,NM_001004741	chr11,chr11	+,-	OR5AR1,OR5M10	85443,-17
chr19:41220188-41220499	chr19	+	41220260	41220330	True	NM_025194,NM_001142555,NM_024876	chr19,chr19,chr19	+,-,-	ITPKC,ADCK4,ADCK4	2677,731,2510
chr12:8113540-8115342	chr12	+	8113625	8115106	True	NM_006931,NM_018416	chr12,chr12	-,+	SLC2A3,FOXJ2	-24733,70252
chr15:37181085-37181577	chr15	+	37181270	37181580	True	NR_024264,NM_032499	chr15,chr15	-,+	LOC145845,C15orf41	-2536,-248515
chr1:6267731-6268660	chr1	+	6267761	6268335	True	NM_000983,NM_207396	chr1,chr1	-,+	RPL22,RNF207	-8082,-1623
chr4:41749320-41749592	chr4	+	41749347	41749627	True	NM_001112720,NM_003924	chr4,chr4	+,-	LIMCH1,PHOX2B	-134479,1410
chr10:6018140-6018491	chr10	+	6018179	6018425	True	NM_032807,NR_033494,NM_002189,NM_172200	chr10,chr10,chr10,chr10	+,-,-,-	FBXO18,IL15RA,IL15RA,IL15RA	-81882,1767,1199,1199
chr3:46785515-46786209	chr3	+	46785594	46786160	True	NM_001205271,NM_199183,NM_147196	chr3,chr3,chr3	-,-,+	PRSS46,PRSS45,TMIE	-7673,135,-42822
chr9:5437209-5437432	chr9	+	5437270	5437353	True	NM_014143,NM_018465	chr9,chr9	+,-	CD274,C9orf46	13149,558
chr16:21829306-21830566	chr16	+	21829903	21830424	True	NM_170664,NR_003370	chr16,chr16	+,-	OTOA,RRN3P1	-113679,128
chr16:21829306-21830566	chr16	+	15186374	15186508	False	NM_018427,NM_015027	chr16,chr16	-,+	RRN3,PDXDC1	1712,-117592
chr16:21829306-21830566	chr16	-	29087634	29088155	False	NM_024816,NR_003369	chr16,chr16	-,+	RABEP2,RRN3P2	-151102,-1529
chr1:153951946-153953336	chr1	+	153952037	153953136	True	NM_002870,NM_006694,NM_001030	chr1,chr1,chr1	-,-,+	RAB13,JTB,RPS27	5720,-1586,10102
chr1:121280290-121281800	chr1	+	121280300	121281582	True	NR_003955,NM_001017986	chr1,chr1	+,-	EMBP1,FCGR1B	-19441,-344356
chr10:105613363-105614155	chr10	+	105613367	105614086	True	NM_014631,NM_014720	chr10,chr10	-,+	SH3PXD2A,SLK	1129,113383
chr3:69134443-69134795	chr3	+	69134446	69134843	True	NM_006407,NM_003968,NM_198195	chr3,chr3,chr3	+,-,-	ARL6IP5,UBA3,UBA3	-407,-4922,-4922
chr10:122628200-122628713	chr10	+	122628242	122628598	True	NM_018117,NR_033850	chr10,chr10	+,-	WDR11,LOC283089	-17606,-17551
chr17:43922637-43922885	chr17_ctg5_hap1	-	944625	944841	False	NM_175882,NR_024559	chr17_ctg5_hap1,chr17_ctg5_hap1	-,+	IMP5,LOC100128977	493,-49982
chr17:43922637-43922885	chr17	+	43922698	43922914	True	NM_175882,NR_024559	chr17,chr17	+,-	IMP5,LOC100128977	-493,50015
chr22:39268609-39268868	chr22	+	39268664	39268840	True	NM_014292,NM_145699	chr22,chr22	-,+	CBX6,APOBEC3A	-406,84686
chr10:122217154-122217433	chr10	+	122217170	122217418	True	NM_001030059,NR_033850	chr10,chr10	+,-	PPAPDC1A,LOC283089	-755,393323
chr6:111805366-111807274	chr6	+	111805473	111806734	True	NR_034108,NR_034109,NM_002912,NR_034111,NR_034110	chr6,chr6,chr6,chr6,chr6	+,+,-,+,+	LOC643749,LOC643749,REV3L,LOC643749,LOC643749	-850,-850,-1059,-850,-850
chr12:5018202-5018594	chr12	+	5018325	5018527	True	NM_006422,NM_000217	chr12,chr12	-,+	AKAP3,KCNA1	-263982,545
chr1:247619146-247619511	chr1	+	247619153	247619526	True	NM_001004492,NM_001004698	chr1,chr1	-,+	OR2B11,OR2W5	-3869,34843
chr2:111880948-111881958	chr2	+	111880952	111881782	True	NM_138624,NR_015395,NM_138623,NM_001204106,NM_207003,NM_006538,NM_207002,NM_001204107,NM_001204113,NM_001204112,NM_001204111,NM_001204110,NM_138627,NM_138626,NM_138625,NM_138622,NM_001204108,NM_001204109,NM_138621	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,-,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+	BCL2L11,LOC541471,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11	-2512,370960,-2512,-2512,-2512,-2512,-2512,-2512,-2512,-2512,-2512,-2512,-2512,-2512,-2512,-2512,-2512,-2512,-2512
chr5:1204048-1204663	chr5	+	1204182	1204371	True	NM_001003841,NM_001193376	chr5,chr5	+,-	SLC6A19,TERT	-2523,90842
chr11:67806116-67806335	chr11	+	67806192	67806374	True	NM_030930,NM_006019,NM_002496,NM_006053	chr11,chr11,chr11,chr11	-,+,+,+	UNC93B1,TCIRG1,NDUFS8,TCIRG1	-34599,87,-8159,4072
chr11:66057548-66057890	chr11	+	66057644	66057876	True	NM_020470,NM_153266	chr11,chr11	-,+	YIF1A,TMEM151A	-1006,1496
chr1:36185216-36185448	chr1	+	36185396	36185456	True	NM_017629,NM_152374	chr1,chr1	+,-	EIF2C4,C1orf216	88371,-606
chr5:175841527-175841770	chr5	+	175841685	175841824	True	NM_001834,NM_007097,NM_138820	chr5,chr5,chr5	-,-,+	CLTB,CLTB,HIGD2A	1773,1773,-25952
chr12:48288064-48289622	chr12	+	48288068	48289362	True	NM_001143841,NM_000376,NM_001017536,NM_001017535	chr12,chr12,chr12,chr12	+,-,-,-	TMEM106C,VDR,VDR,VDR	67967,9502,9502,9502
chr15:91796310-91796810	chr15	+	91796361	91796831	True	NM_014848,NM_018668	chr15,chr15	+,-	SV2B,VPS33B	-152874,-230528
chr6:168417137-168417632	chr6	+	168417189	168417515	True	NM_030615,NM_005355,NM_001129895	chr6,chr6,chr6	+,+,-	KIF25,KIF25,HGC6.3	1037,1037,-39570
chr11:74804958-74805234	chr11	+	74805178	74805266	True	NM_001005285,NM_001145212	chr11,chr11	-,+	OR2AT4,SLCO2B1	-4420,56765
chr11:73357668-73358619	chr11	+	73357743	73358597	True	NM_001130036,NM_001130034,NM_001130035,NM_001130033,NM_021200,NM_015159	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,-	PLEKHB1,PLEKHB1,PLEKHB1,PLEKHB1,PLEKHB1,FAM168A	1137,-4,-4,-571,-571,-48515
chr11:61062073-61062348	chr11	+	61062105	61062253	True	NM_015533,NM_152718	chr11,chr11	+,-	DAK,VWCE	38400,585
chr4:41750460-41751796	chr4	+	41750565	41751721	True	NM_001112720,NM_003924	chr4,chr4	+,-	LIMCH1,PHOX2B	-135697,146
chr16:4585713-4586008	chr16	+	4585721	4585937	True	NM_001199055,NM_001199054,NM_013399,NM_001199056,NM_001145011	chr16,chr16,chr16,chr16,chr16	-,-,-,-,+	C16orf5,C16orf5,C16orf5,C16orf5,LOC342346	2929,2584,2929,2929,20553
chr18:29177300-29177552	chr18	+	29177300	29177583	True	NM_004775,NM_000371	chr18,chr18	-,+	B4GALT6,TTR	87154,-5628
chr2:74869063-74870089	chr2	+	74869247	74869707	True	NM_138804,NM_004263	chr2,chr2	-,+	C2orf65,SEMA4F	5521,11685
chr12:133286119-133286424	chr12	+	133286160	133286263	True	NM_001170544,NM_001170543,NM_138575,NM_006231	chr12,chr12,chr12,chr12	+,+,+,-	PGAM5,PGAM5,PGAM5,POLE	1129,1129,1129,-22215
chr1:233484573-233485404	chr1	+	233484805	233485235	True	NM_032435,NM_014801	chr1,chr1	+,-	KIAA1804,PCNXL2	-21350,-53346
chr10:75413163-75413552	chr10	+	75413233	75413581	True	NM_024875,NM_001114133,NM_004922	chr10,chr10,chr10	-,-,+	SYNPO2L,SYNPO2L,SEC24C	-2446,2301,90549
chr8:56809049-56809388	chr8	+	56809227	56809305	True	NM_002350,NM_152417	chr8,chr8	+,-	LYN,TMEM68	-16894,-123342
chr4:9550036-9551815	chr4	+	9550058	9551121	True	NR_031688,NM_001040448	chr4,chr4	-,+	MIR548I2,DEFB131	6866,-103849
chr5:126988645-126990445	chr5	+	126988744	126990336	True	NM_001048252,NM_001127385,NR_015360	chr5,chr5,chr5	+,+,-	CTXN3,CTXN3,FLJ33630	-4082,-88,428481
chr2:26625754-26626688	chr2	+	26625794	26626255	True	NM_153835,NM_145038	chr2,chr2	-,+	GPR113,CCDC164	-56109,-1061
chr16:1967406-1967676	chr16	+	1967507	1967623	True	NM_001009606,NM_004548	chr16,chr16	-,+	HS3ST6,NDUFB10	658,41893
chr16:58769939-58770428	chr16	+	58769952	58770470	True	NM_002080,NM_024860	chr16,chr16	-,+	GOT2,SETD6	-1706,-220620
chr17:56499120-56500931	chr17	+	56499334	56500838	True	NM_017763,NR_027647	chr17,chr17	-,+	RNF43,LPO	-4403,-183599
chr5:5423186-5423401	chr5	+	5423234	5423442	True	NM_015325,NR_028351	chr5,chr5	+,-	KIAA0947,FLJ33360	-478,914013
chr3:51704329-51705043	chr3	+	51704433	51705073	True	NM_015926,NM_001129884,NR_024012,NM_001143833	chr3,chr3,chr3,chr3	+,+,+,-	TEX264,TEX264,TEX264,IQCF6	148,148,148,108180
chr11:122066279-122067640	chr11	+	122066438	122067295	True	NM_032873,NR_024430	chr11,chr11	+,-	UBASH3B,MIR100HG	459102,6532
chr22:25169140-25169356	chr22	+	25169144	25169356	True	NM_001008496,NR_001283	chr22,chr22	-,+	PIWIL3,TOP1P2	1377,-8727
chr19:48441548-48442409	chr19	+	48441937	48442034	True	NR_024219,NR_024218,NR_024217,NR_024216,NR_024220,NM_003167,NR_004437,NR_004436,NR_004435	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,-,+,+,+	SNAR-C5,SNAR-C4,SNAR-C2,SNAR-A13,SNAR-C1,SULT2A1,SNAR-A12,SNAR-A2,SNAR-A1	-9916,763,-9916,6144,-9916,-52283,6144,-4553,-4553
chr19:48441548-48442409	chr19	+	48452694	48452753	False	NR_024219,NR_024221,NR_024218,NR_024217,NR_024216,NR_024220,NR_004437,NM_001128326	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,+,+,-	SNAR-C5,SNAR-C3,SNAR-C4,SNAR-C2,SNAR-A13,SNAR-C1,SNAR-A12,BSPH1	6185,799,-9950,6185,-4569,6185,-4569,42725
chr19:48441548-48442409	chr19	+	48458082	48458179	False	NR_024219,NR_024220,NR_024221,NR_024217,NR_024216,NR_004437,NM_001128326	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,+,-	SNAR-C5,SNAR-C1,SNAR-C3,SNAR-C2,SNAR-A13,SNAR-A12,BSPH1	759,759,-4583,759,-9957,-9957,37300
chr19:48441548-48442409	chr19	+	48415456	48415553	False	NR_024219,NR_024220,NR_024217,NR_024216,NM_003167,NR_004437,NR_004436,NR_004435	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,-,+,+,+	SNAR-C5,SNAR-C1,SNAR-C2,SNAR-A13,SULT2A1,SNAR-A12,SNAR-A2,SNAR-A1	754,754,754,-4575,-25802,-4575,6132,6132
chr19:48441548-48442409	chr19	+	48431224	48431321	False	NR_024219,NR_024220,NR_024223,NR_024224,NR_024225,NR_024226,NR_024227,NR_024228,NR_024229,NR_024215,NR_024214,NR_024217,NM_003167,NR_004436,NR_004435,NR_024242	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,+,+,+,+,+,+,+,-,+,+,+	SNAR-C5,SNAR-C1,SNAR-A5,SNAR-A7,SNAR-A11,SNAR-A9,SNAR-A6,SNAR-A8,SNAR-A10,SNAR-A4,SNAR-A3,SNAR-C2,SULT2A1,SNAR-A2,SNAR-A1,SNAR-A14	753,753,-4242,-4242,-4242,-4242,-4242,-4242,-4242,-4242,-4242,753,-41570,6116,6116,-4242
chr14:81984723-81985563	chr14	+	81985098	81985588	True	NM_005065,NM_000369	chr14,chr14	-,+	SEL1L,TSHR	14667,-563282
chr14:23425426-23425990	chr14	+	23425473	23425983	True	NM_017815,NM_173527,NM_001166269,NM_001166270	chr14,chr14,chr14,chr14	-,+,-,-	HAUS4,REM2,HAUS4,HAUS4	418,-73099,418,418
chr1:248720741-248721930	chr1	+	248720782	248721943	True	NM_001004694,NM_001013355	chr1,chr1	-,+	OR2T29,OR2G6	884,-35888
chr1:248720741-248721930	chr1	-	248652738	248653899	False	NM_001004697,NM_001004694	chr1,chr1	+,-	OR2T5,OR2T29	-902,68928
chr4:4536258-4536624	chr4	+	4536280	4536566	True	NR_037888,NM_016930	chr4,chr4	+,-	LOC100507266,STX18	7291,7259
chr8:24166386-24167951	chr8	+	24166555	24167834	True	NM_003155,NM_014265	chr8,chr8	-,+	STC1,ADAM28	-454235,-15029
chr6:28411952-28412344	chr6	+	28411952	28412340	True	NM_001509,NM_001012455	chr6,chr6	+,-	GPX5,ZSCAN23	81448,-673
chrX:153447309-153447959	chrX	+	153447311	153447475	True	NM_001586,NM_000513,NM_001048181	chrX,chrX,chrX	-,+,+	TEX28,OPN1MW,OPN1MW2	76035,609,609
chrX:153447309-153447959	chrX	+	153484430	153484791	False	NM_001586,NM_000513,NM_001048181	chrX,chrX,chrX	-,+,+	TEX28,OPN1MW,OPN1MW2	38916,411,411
chrX:153447309-153447959	chrX	+	153522237	153522401	False	NM_001205201,NM_001145933,NM_012253,NM_001586	chrX,chrX,chrX,chrX	-,+,+,-	TEX28,TKTL1,TKTL1,TEX28	1219,1625,1625,1109
chr3:157260700-157260983	chr3	+	157260723	157261016	True	NR_024016,NM_001130001,NM_001167916,NM_001099777,NM_001130002	chr3,chr3,chr3,chr3,chr3	+,+,-,+,+	C3orf55,C3orf55,VEPH1,C3orf55,C3orf55	142,142,-39308,142,142
chr18:10469007-10469293	chr18	+	10469056	10469322	True	NM_153000,NM_022068	chr18,chr18	+,-	APCDD1,FAM38B	-14482,679489
chrX:152801884-152802267	chrX	+	152801886	152802136	True	NM_001130997,NM_001001344,NM_021949	chrX,chrX,chrX	-,+,+	FAM58A,ATP2B3,ATP2B3	62546,-357,-357
chrX:117477227-117477941	chrX	+	117477352	117477987	True	NM_019045,NM_001168301,NM_001184966,NM_001184965	chrX,chrX,chrX,chrX	+,-,+,+	WDR44,KLHL13,WDR44,WDR44	2048,-226049,2048,2048
chrX:21966210-21967190	chrX	+	21966272	21967226	True	NM_004595,NM_014332	chrX,chrX	+,-	SMS,SMPX	-7613,-190042
chr9:10539342-10540188	chr9	+	10539522	10539942	True	NM_000550,NM_002839	chr9,chr9	+,-	TYRP1,PTPRD	2153443,72845
chr12:14923580-14923850	chr12	+	14923580	14923840	True	NM_177925,NR_027716,NM_175054	chr12,chr12,chr12	+,+,-	H2AFJ,H2AFJ,HIST4H4	3429,3429,275
chr1:166136471-166136729	chr1	+	166136536	166136776	True	NM_001017961,NR_037431	chr1,chr1	-,+	FAM78B,MIR3658	-578,-259440
chr9:46387305-46387917	chr9	+	46387454	46387830	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2756724,299735
chr9:46387305-46387917	chr9	-	46116565	46116861	False	NM_001145196,NR_024060	chr9,chr9	-,+	FAM75A6,FAM27A	-2485835,-389587
chr15:99793006-99793416	chr15	+	99793063	99793266	True	NM_001040658,NM_001040659,NM_001040656,NM_001040657,NM_001040655,NM_144598,NM_022905,NM_001040660	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,-,-,-,+,-,-	TTC23,TTC23,TTC23,TTC23,TTC23,LRRC28,TTC23,TTC23	-3248,-3248,-3248,-3248,-3248,-1469,-3248,-3248
chrX:70324633-70324986	chrX	+	70324632	70324794	True	NM_005938,NM_001170931,NR_033212,NM_000206,NM_001025265	chrX,chrX,chrX,chrX,chrX	+,+,-,-,-	FOXO4,FOXO4,CXorf65,IL2RG,CXorf65	-8684,-8684,1894,6737,1894
chr11:416591-416864	chr11	+	416595	416841	True	NM_001135053,NM_007183,NM_001135054,NM_021805	chr11,chr11,chr11,chr11	-,+,-,-	SIGIRR,PKP3,SIGIRR,SIGIRR	606,-22429,-1596,606
chr12:68557812-68558319	chr12	+	68557820	68558365	True	NM_001010942,NM_000619	chr12,chr12	+,-	RAP1B,IFNG	446286,-4299
chr11:44997671-44998342	chr11	+	44997689	44998316	True	NM_006034,NR_026681	chr11,chr11	-,+	TP53I11,LOC221122	-25081,-2287
chr6:36165602-36165903	chr6	+	36165621	36165933	True	NM_001010903,NM_015695	chr6,chr6	-,+	C6orf222,BRPF3	138779,-1122
chr20:9807604-9808570	chr20	+	9807914	9808416	True	NM_022096,NM_020341	chr20,chr20	+,-	ANKRD5,PAK7	207280,11321
chr19:1207982-1208188	chr19	+	1208063	1208155	True	NM_000455,NM_152769	chr19,chr19	+,-	STK11,C19orf26	-2317,29885
chr11:62187876-62188878	chr11	+	62188516	62188816	True	NM_003357,NM_206998	chr11,chr11	+,-	SCGB1A1,SCGB1D4	-2061,-121980
chr16:48654645-48655704	chr16	+	48654705	48655739	True	NM_153029,NM_031490	chr16,chr16	-,+	N4BP1,LONP2	-10585,-376545
chr19:46629005-46630785	chr19	+	46629026	46630803	True	NM_001002915,NM_207393	chr19,chr19	+,-	IGFL2,IGFL3	20235,-1095
chr2:109200036-109200273	chr2	+	109200080	109200152	True	NM_004987,NM_022336,NM_001193488	chr2,chr2,chr2	+,-,+	LIMS1,EDAR,LIMS1	4614,405738,4769
chr9:107689413-107689673	chr9	+	107689600	107689708	True	NR_024011,NM_005502	chr9,chr9	+,-	LOC286367,ABCA1	-153018,869
chr12:93856789-93857191	chr12	+	93856838	93856934	True	NM_003348,NM_014050,NM_172177,NM_172178	chr12,chr12,chr12,chr12	-,+,+,+	UBE2N,MRPL42,MRPL42,MRPL42	-20812,4335,4335,4335
chr12:113776173-113777126	chr12	+	113776192	113776756	True	NM_001159727,NM_024959	chr12,chr12	+,-	PLBD2,SLC24A6	19614,-3267
chr6:87997312-87997711	chr6	+	87997370	87997594	True	NM_001042493,NM_198568	chr6,chr6	+,-	C6orf162,GJB7	34711,41466
chrX:128975061-128975822	chrX	+	128975085	128975753	True	NM_001008222,NM_018990,NM_016032	chrX,chrX,chrX	-,+,-	ZDHHC9,SASH3,ZDHHC9	1858,-61244,2207
chr4:88312115-88312465	chr4	+	88312136	88312493	True	NM_024047,NM_016245	chr4,chr4	+,-	NUDT9,HSD17B11	31241,12
chr17:7760320-7760582	chr17	+	7760340	7760470	True	NM_032356,NM_144607,NM_203411	chr17,chr17,chr17	-,+,+	LSMD1,CYB5D1,TMEM88	752,593,-2007
chrX:151885979-151886368	chrX	+	151885986	151886344	True	NM_001129826,NM_004909,NM_005361,NM_175742,NM_001129828,NM_175743,NM_153488,NM_001080848	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,+,+,-,+,+,-	CSAG3,CSAG2,MAGEA2,MAGEA2,CSAG3,MAGEA2,MAGEA2B,CSAG2	-8316,-8239,-2918,-2918,-8239,-2918,-653,-8239
chrX:151885979-151886368	chrX	-	151919138	151919496	False	NM_001129826,NM_004909,NM_005361,NM_175742,NM_001129828,NM_175743,NM_153488,NM_001080848	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,-,-,+,-,-,+	CSAG3,CSAG2,MAGEA2,MAGEA2,CSAG3,MAGEA2,MAGEA2B,CSAG2	8314,8237,2918,2918,8237,2918,653,8237
chr19:50001974-50002807	chr19	+	50002048	50002620	True	NR_001285,NR_000020,NR_000021,NR_000019,NR_000018,NM_001015,NR_029703	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,+,-	SNORD35B,SNORD33,SNORD32A,SNORD34,SNORD35A,RPS11,MIR150	-1124,-8226,-8877,-7936,-7668,-2466,1555
chr17:61916728-61917089	chr17	+	61916732	61916930	True	NM_001199163,NM_001098426	chr17,chr17	+,-	PSMC5,SMARCD2	-11739,3471
chr19:41870428-41871056	chr19	+	41870549	41870803	True	NM_030578,NM_001098825	chr19,chr19	-,+	B9D2,TMEM91	-471,-729
chr10:26992730-26993854	chr10	+	26993107	26993703	True	NM_014317,NM_001012750	chr10,chr10	+,-	PDSS1,ABI1	-6568,156371
chr15:65119075-65119513	chr15	+	65119101	65119275	True	NM_001195059,NM_025049	chr15,chr15	+,-	PLEKHO2,PIF1	14806,-1263
chr20:62611491-62612214	chr20	+	62611820	62612106	True	NM_080621,NM_012469	chr20,chr20	-,+	SAMD10,PRPF6	-825,324
chr19:14639678-14639996	chr19	+	14639900	14639964	True	NR_038104,NR_030369,NM_138501,NM_006145,NR_038103	chr19,chr19,chr19,chr19,chr19	+,+,+,-,+	TECR,MIR639,TECR,DNAJB1,TECR	414,390,414,-10699,414
chr6:44057482-44058250	chr6	+	44057544	44058266	True	NM_018426,NM_032111	chr6,chr6	+,-	TMEM63B,MRPL14	37109,36975
chr19:48671634-48672995	chr19	+	48671889	48672865	True	NM_000234,NM_153608	chr19,chr19	-,+	LIG1,ZNF114	745,101788
chr8:1921132-1921727	chr8	+	1921139	1921631	True	NR_033895,NM_014867	chr8,chr8	-,+	LOC286083,KBTBD11	-670312,412
chr19:44220360-44220787	chr19	+	44220405	44220513	True	NM_019108,NM_019612	chr19,chr19	-,+	C19orf61,IRGC	38679,-242
chr2:32853067-32853368	chr2	+	32853089	32853283	True	NM_017735,NM_021209,NM_001193509	chr2,chr2,chr2	+,-,+	TTC27,NLRC4,TTC27	-53,-362277,-53
chrX:102509425-102509930	chrX	+	102509494	102509846	True	NM_001080425,NM_153333,NM_001006684	chrX,chrX,chrX	+,-,-	BEX4,TCEAL8,TCEAL8	-39526,325,325
chr15:41099348-41099648	chr15	+	41099536	41099696	True	NM_018163,NM_001077268	chr15,chr15	-,+	DNAJC17,ZFYVE19	30,-313
chr8:23315210-23315548	chr8	+	23315407	23315567	True	NM_016612,NM_001128930,NM_004901	chr8,chr8,chr8	+,-,-	SLC25A37,ENTPD4,ENTPD4	70795,-163,-271
chr7:21981711-21983649	chr7	+	21981718	21983526	True	NM_003777,NM_001127371,NM_001127370,NM_018719	chr7,chr7,chr7,chr7	+,-,-,-	DNAH11,CDCA7L,CDCA7L,CDCA7L	-398936,2066,2066,2066
chr1:161719980-161720569	chr1	+	161719998	161720408	True	NM_007240,NR_002595	chr1,chr1	+,-	DUSP12,RPL31P11	-468,-64956
chr1:155948616-155949110	chr1	+	155948867	155949124	True	NM_001162383,NM_004723,NM_181885,NM_001162384	chr1,chr1,chr1,chr1	-,-,+,-	ARHGEF2,ARHGEF2,RXFP4,ARHGEF2	-531,-901,-37438,-531
chr9:130209473-130210424	chr9	+	130209480	130210448	True	NM_001005374,NM_001190723,NM_000976,NM_138361,NR_002449,NM_001005373	chr9,chr9,chr9,chr9,chr9,chr9	+,+,-,+,-,+	LRSAM1,LRSAM1,RPL12,LRSAM1,SNORA65,LRSAM1	4085,3316,3313,3340,518,3316
chr16:581840-582186	chr16	+	581859	581933	True	NM_005632,NR_024121	chr16,chr16	+,-	SOLH,NCRNA00235	-4054,-4452
chr8:134582552-134582832	chr8	+	134582552	134582878	True	NM_003033,NR_037944,NM_173344	chr8,chr8,chr8	-,+,-	ST3GAL1,WISP1,ST3GAL1	1355,-379321,1355
chr19:54663397-54664050	chr19	+	54663507	54664007	True	NM_014516,NM_024316	chr19,chr19	+,-	CNOT3,LENG1	-22122,-61
chr4:163021432-163022277	chr4	+	163021657	163022294	True	NM_006174,NM_001128427	chr4,chr4	+,-	NPY5R,FSTL5	1242796,62951
chr2:55744562-55744821	chr2	+	55744645	55744713	True	NM_080667,NM_018084	chr2,chr2	+,-	CCDC104,CCDC88A	2026,-97588
chr13:24736919-24737135	chr13	+	24736998	24737141	True	NM_153023,NR_031753,NM_001166271,NM_001007537	chr13,chr13,chr13,chr13	+,+,+,-	SPATA13,MIR2276,SPATA13,C1QTNF9B	-2189,-495,-2189,-265873
chr7:143880487-143882393	chr7	+	143881843	143882423	True	NM_001003702,NM_198495	chr7,chr7	-,+	ARHGEF35,CTAGE4	10418,-1346
chr7:143880487-143882393	chr7	-	143964516	143965096	False	NR_002158,NM_001005328,NM_198495	chr7,chr7,chr7	+,-,-	OR2A20P,OR2A7,CTAGE4	31369,-7795,1346
chr7:143880487-143882393	chr6	-	132030330	132030452	False	NM_030908,NM_005021,NM_001145659	chr6,chr6,chr6	-,+,-	OR2A4,ENPP3,CTAGE9	-7789,-71939,1759
chr1:155898019-155898463	chr1	+	155898253	155898387	True	NM_014949,NR_002974,NM_181885,NR_003005	chr1,chr1,chr1,chr1	-,-,+,-	KIAA0907,SNORA42,RXFP4,SCARNA4	5859,-8420,13092,-2376
chr5:176561598-176562094	chr5	+	176561611	176562138	True	NM_172349,NM_022455,NM_001199298	chr5,chr5,chr5	+,+,-	NSD1,NSD1,UIMC1	-1582,-829,-127816
chr12:120106108-120106329	chr12	+	120106185	120106372	True	NR_031589,NM_006253	chr12,chr12	-,+	MIR1178,PRKAB1	45208,-475
chr3:115394291-115395130	chr3	+	115394641	115395039	True	NM_002045,NM_015642	chr3,chr3	+,-	GAP43,ZBTB20	-52543,-528514
chr14:45757416-45757808	chr14	+	45757416	45757818	True	NM_018353,NM_020937	chr14,chr14	-,+	MIS18BP1,FANCM	-34811,-152338
chr9:141103809-141105168	chr9	+	141104332	141105200	True	NM_032937	chr9	-	C9orf37	-591024
chr17:8110297-8110717	chr17	+	8110330	8110746	True	NM_004217,NR_037447	chr17,chr17	-,+	AURKB,MIR3676	3187,-19888
chr11:1967322-1967916	chr11	+	1967490	1967896	True	NR_024471,NM_021134	chr11,chr11	-,+	LOC100133545,MRPL23	43304,605
chr19:51015501-51015795	chr19	+	51015505	51015765	True	NM_138334,NM_001024656,NM_001114598,NM_206538	chr19,chr19,chr19,chr19	-,-,-,+	JOSD2,ASPDH,ASPDH,C19orf63	-1160,2232,1427,-35820
chrX:70936380-70936947	chrX	+	70936401	70936799	True	NR_034005,NM_001145140,NM_001145139	chrX,chrX,chrX	+,-,-	FLJ46446,CXorf49,CXorf49B	-19406,1386,1386
chrX:70936380-70936947	chrX	-	70984475	70984873	False	NR_001568,NM_001145140,NM_001145139	chrX,chrX,chrX	-,+,+	BCYRN1,CXorf49,CXorf49B	-35513,-1386,-1386
chr1:173156782-173157658	chr1	+	173156850	173157713	True	NM_004905,NM_003326	chr1,chr1	+,-	PRDX6,TNFSF4	288772,18815
chr1:16690728-16691947	chr1	+	16690963	16691720	True	NM_018994,NM_015609,NM_001114600	chr1,chr1,chr1	-,+,+	FBXO42,C1orf144,C1orf144	-12015,1862,1862
chr19:14015546-14016001	chr19	+	14015563	14015966	True	NM_024323,NM_017721	chr19,chr19	-,+	C19orf57,CC2D1A	994,989
chr6:35096082-35096390	chr6	+	35096110	35096412	True	NM_152753,NM_001093728	chr6,chr6	+,-	SCUBE3,TCP11	85777,12825
chr13:26801406-26803045	chr13	+	26801679	26802971	True	NM_001260,NM_183043,NM_005977,NM_183044	chr13,chr13,chr13,chr13	+,-,-,-	CDK8,RNF6,RNF6,RNF6	25784,-5651,-5171,-5785
chr20:5481712-5482056	chr20	+	5481772	5482061	True	NR_029405,NR_015406	chr20,chr20	+,-	LOC643406,LOC149837	-29981,3232
chr20:5481712-5482056	chr20	-	5454966	5455016	False	NR_029405,NR_015406	chr20,chr20	+,-	LOC643406,LOC149837	-3175,30276
chr1:6641578-6642294	chr1	+	6641738	6642242	True	NM_014851,NM_005341	chr1,chr1	-,+	KLHL21,ZBTB48	20737,-1733
chr10:30971515-30972977	chr10	+	30971518	30972849	True	NM_183058,NM_005204	chr10,chr10	-,+	LYZL2,MAP3K8	-52871,-248703
chr14:95626222-95626450	chr14	+	95626306	95626485	True	NR_015415,NM_177438	chr14,chr14	+,-	FLJ45244,DICER1	-2339,-2547
chr11:17371634-17372040	chr11	+	17371955	17372072	True	NM_000525,NM_001202439	chr11,chr11	-,+	KCNJ11,DKFZp686O24166	38184,1236
chr3:8543432-8544401	chr3	+	8543443	8544351	True	NM_014583,NR_033378	chr3,chr3	+,-	LMCD1,LOC100288428	17,-99
chr13:21714583-21714845	chr13	+	21714639	21714829	True	NM_001166017,NM_005870	chr13,chr13	-,+	SKA3,SAP18	35962,-37
chr8:87126821-87127756	chr8	+	87126975	87127552	True	NM_152565,NM_033126	chr8,chr8	+,-	ATP6V0D2,PSKH2	-15894,-45124
chr1:205542915-205543641	chr1	+	205543145	205543689	True	NM_181644,NR_027086	chr1,chr1	+,-	MFSD4,LOC284578	-5091,-17382
chr14:78174508-78174749	chr14	+	78174516	78174786	True	NM_031210,NM_006020	chr14,chr14	+,-	C14orf156,ALKBH1	-142,-160
chrY:23696849-23697810	chrY	+	23697234	23697318	True	NM_001006120,NM_005058,NR_001537,NM_001006121	chrY,chrY,chrY,chrY	+,+,-,+	RBMY1D,RBMY1A1,TTTY13,RBMY1B	-487,-493,59294,-527
chrY:23696849-23697810	chrY	+	23673693	23673777	False	NM_001006120,NM_005058,NR_001537,NM_001006121,NM_001006118	chrY,chrY,chrY,chrY,chrY	+,+,-,+,+	RBMY1D,RBMY1A1,TTTY13,RBMY1B,RBMY1E	-487,-493,82835,-527,-487
chrY:23696849-23697810	chrY	-	24040119	24040203	False	NM_001006120,NM_005058,NR_001527,NM_001006121,NM_001006118	chrY,chrY,chrY,chrY,chrY	-,-,+,-,-	RBMY1D,RBMY1A1,TTTY6,RBMY1B,RBMY1E	487,493,250908,527,487
chrY:23696849-23697810	chrY	-	24063660	24063744	False	NM_001006120,NM_001006121,NR_001527,NM_001006118	chrY,chrY,chrY,chrY	-,-,+,-	RBMY1D,RBMY1B,TTTY6,RBMY1E	487,527,227367,487
chr21:35012290-35013975	chr21	+	35012541	35013797	True	NM_145858,NM_003024,NM_001001132	chr21,chr21,chr21	-,+,+	CRYZL1,ITSN1,ITSN1	413,986,986
chr11:118214529-118215119	chr11	+	118214632	118215147	True	NM_000073,NM_001040651,NM_000732	chr11,chr11,chr11	+,-,-	CD3G,CD3D,CD3D	-89,-1173,-1173
chr7:119914333-119914767	chr7	+	119914346	119914668	True	NM_012281,NM_012338	chr7,chr7	+,-	KCND2,TSPAN12	-675,583559
chr3:44037598-44037939	chr3	+	44037656	44037960	True	NM_001204834,NR_029700	chr3,chr3	-,+	ANO10,MIR138-1	-374096,117743
chr6:167624154-167624509	chr6	+	167624369	167624489	True	NM_005299,NM_001145121	chr6,chr6	-,+	GPR31,TCP10L2	-53050,-40340
chr11:57199845-57200130	chr11	+	57199980	57200068	True	NM_199329,NM_014096,NM_178570,NM_017611	chr11,chr11,chr11,chr11	-,-,+,-	SLC43A3,SLC43A3,RTN4RL2,SLC43A3	-5386,-5457,28270,-4927
chr12:122985606-122986507	chr12	+	122985616	122986505	True	NM_014708,NM_017612	chr12,chr12	+,-	KNTC1,ZCCHC8	25303,-98
chr1:16971619-16972075	chr3	-	49726122	49726172	True	NM_022064,NM_020998	chr3,chr3	+,-	RNF123,MST1	817,74
chr12:54892800-54894201	chr12	+	54893044	54893889	True	NM_005337,NM_144594,NM_001184976	chr12,chr12,chr12	+,-,+	NCKAP1L,GTSF1,NCKAP1L	-1607,-25658,-534
chr5:140713998-140714208	chr5	+	140714191	140714251	True	NM_031993,NM_005642,NM_032009,NM_032011,NM_018915,NM_018916,NM_018912	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,-,+,+,+,+,+	PCDHGA1,TAF7,PCDHGA2,PCDHGA3,PCDHGA2,PCDHGA3,PCDHGA1	-3993,-13840,4102,9349,4102,9349,-3993
chr3:169585204-169587081	chr3	+	169585702	169586615	True	NM_182610,NM_024727	chr3,chr3	+,-	SAMD7,LRRC31	42866,1104
chr7:44083444-44084105	chr7	+	44083492	44083962	True	NR_024116,NM_001014436,NM_001122956,NR_015401,NM_014063,NR_024416	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,+,+	RASA4P,DBNL,DBNL,FLJ35390,DBNL,FLJ35390	-3270,276,276,-4845,276,-4476
chr3:16554500-16554805	chr3	+	16554499	16554699	True	NM_138381,NM_015150	chr3,chr3	+,-	OXNAD1,RFTN1	-247883,573
chr1:28673401-28673660	chr1	+	28673604	28673669	True	NM_014280,NM_017638	chr1,chr1	-,+	DNAJC8,MED18	-114062,-18149
chr11:104812617-104814299	chr11	+	104812616	104814349	True	NM_001077244,NM_033306	chr11,chr11	+,-	GRIA4,CASP4	666450,13130
chr10:120840447-120841558	chr10	+	120840497	120841162	True	NM_207009,NM_003750	chr10,chr10	+,-	FAM45A,EIF3A	22448,-163
chr2:158233320-158234619	chr2	+	158233517	158234594	True	NM_014568,NM_001009959	chr2,chr2	+,-	GALNT5,ERMN	-119239,-49371
chr17:73660915-73662225	chr17	+	73661091	73662133	True	NM_001003716,NM_004259,NM_001003715,NM_013260	chr17,chr17,chr17,chr17	-,-,-,+	RECQL5,RECQL5,RECQL5,SAP30BP	1188,1184,1188,1265
chr12:1928287-1928528	chr12	+	1928339	1928479	True	NM_001039029,NM_001163925,NM_001163926,NM_172364	chr12,chr12,chr12,chr12	+,+,+,-	LRTM2,LRTM2,LRTM2,CACNA2D4	953,953,953,99441
chr2:158453498-158453798	chr2	+	158453536	158453798	True	NM_014568,NM_001111031	chr2,chr2	+,-	GALNT5,ACVR1C	-339247,324
chr19:58663660-58663944	chr19	+	58663891	58663955	True	NM_024620,NM_133502	chr19,chr19	-,+	ZNF329,ZNF274	-1743,30440
chr12:125474304-125474552	chr12	+	125474397	125474471	True	NM_032656,NM_080626	chr12,chr12	-,+	DHX37,BRI3BP	-730,3722
chr6:4133919-4135218	chr6	+	4133920	4135199	True	NM_006117,NR_028588,NM_001085401,NM_206836,NM_001166010	chr6,chr6,chr6,chr6,chr6	-,-,+,-,-	ECI2,ECI2,C6orf201,ECI2,ECI2	682,682,-54534,682,553
chr2:97304195-97304608	chr2	+	97304198	97304452	True	NM_017991,NM_001113382,NM_001115016	chr2,chr2,chr2	-,+,-	KIAA1310,FER1L5,KIAA1310	-83,4121,-83
chr15:40862187-40863474	chr15	+	40862260	40863116	True	NM_052849,NM_001080792,NM_001080791,NM_152260	chr15,chr15,chr15,chr15	-,-,-,+	C15orf57,C15orf57,C15orf57,RPUSD2	-5008,-5008,-5008,-775
chr6:46797095-46797350	chr6	+	46797202	46797370	True	NM_001098518,NM_005588	chr6,chr6	-,+	GPR116,MEP1A	92394,-36159
chr2:232395233-232395564	chr2	+	232395290	232395488	True	NM_006056,NM_152614	chr2,chr2	-,+	NMUR1,C2orf57	-108,62086
chr14:93579864-93580119	chr14	+	93579873	93580019	True	NM_001142594,NR_002808,NM_014216,NM_001142593	chr14,chr14,chr14,chr14	-,+,-,-	ITPK1,ITPK1-AS1,ITPK1,ITPK1	2296,-46127,2296,2296
chr19:6434247-6435423	chr19	+	6434258	6434652	True	NM_139161,NM_003685,NM_173637	chr19,chr19,chr19	+,-,-	CRB3,KHSRP,SLC25A41	29607,-9436,-468
chr22:44256761-44257160	chr22	+	44256845	44257137	True	NM_025225,NM_014351	chr22,chr22	+,-	PNPLA3,SULT4A1	62481,1291
chr21:35881575-35882646	chr21	+	35881687	35882626	True	NM_000219,NM_058182	chr21,chr21	-,+	KCNE1,FAM165B	1037,-133989
chr17:7518224-7518483	chr17	+	7518346	7518530	True	NR_027463,NM_004860	chr17,chr17	+,-	SHBG,FXR2	-1015,-131
chr2:240986056-240986374	chr2	+	240986115	240986356	True	NR_037808,NM_173351,NM_001080835	chr2,chr2,chr2	+,-,-	LOC150935,OR6B3,PRR21	-301612,-626,-3716
chr15:70391833-70392860	chr15	+	70391834	70392836	True	NM_020908,NM_001105192,NM_005078,NR_026764	chr15,chr15,chr15,chr15	-,-,-,+	TLE3,TLE3,TLE3,C15orf50	-1578,-1578,-1578,-264312
chrX:137793021-137793293	chrX	+	137793025	137793325	True	NM_004114,NR_028597	chrX,chrX	-,+	FGF13,SRD5A1P1	552,735652
chr3:101278719-101280483	chr3	+	101278845	101280520	True	NM_020654,NM_017819	chr3,chr3	-,+	SENP7,RG9MTD1	-46760,191
chr5:72415663-72415891	chr5	+	72415674	72415802	True	NM_004472,NM_173490,NM_001161342	chr5,chr5,chr5	-,+,+	FOXD1,TMEM171,TMEM171	328600,585,585
chr5:42756411-42756737	chr5	+	42756450	42756786	True	NM_001134848,NM_001085486	chr5,chr5	+,-	CCDC152,SEPP1	133,55296
chr9:33750556-33750973	chr9	+	33750556	33750718	True	NM_001197097,NR_023917,NM_007343,NM_001197098	chr9,chr9,chr9,chr9	+,-,+,+	PRSS3,PTENP1,PRSS3,PRSS3	-143,-73138,-143,100
chr10:48802997-48803867	chr10	+	48803091	48803595	True	NM_001042357,NM_153034,NM_001042389	chr10,chr10,chr10	-,+,-	PTPN20B,ZNF488,PTPN20A	3457,-448053,3457
chr10:48802997-48803867	chr10	+	49323604	49323654	False	NR_033172,NM_002750	chr10,chr10	-,+	FRMPD2P1,MAPK8	59636,286032
chr10:48802997-48803867	chr10	+	46616164	46616668	False	NR_027632,NM_001042357,NM_001042389	chr10,chr10,chr10	+,-,-	FAM35B,PTPN20B,PTPN20A	280972,3457,3457
chr19:53659371-53660985	chr19	+	53659668	53660592	True	NM_032584,NM_173856,NM_001172674,NM_001172675	chr19,chr19,chr19,chr19	-,+,-,-	ZNF347,VN1R2,ZNF347,ZNF347	1780,100952,1771,1780
chr17:19649417-19649685	chr17	+	19649674	19649735	True	NM_000382,NM_001135168,NM_001135167,NM_000691	chr17,chr17,chr17,chr17	+,-,-,-	ALDH3A2,ALDH3A1,ALDH3A1,ALDH3A1	-97661,-902,-749,2062
chr1:8474037-8474326	chr1	+	8474195	8474335	True	NM_001042682,NM_001080397	chr1,chr1	-,+	RERE,SLC45A1	9462,-89856
chr3:137828787-137830259	chr3	+	137829334	137830248	True	NM_014154,NM_173543,NM_001170538	chr3,chr3,chr3	+,-,-	ARMC8,DZIP1L,DZIP1L	75899,4253,2124
chr4:25269562-25269996	chr4	+	25269741	25270018	True	NM_018323,NM_016955	chr4,chr4	+,-	PI4K2B,SEPSECS	-34151,-107537
chr7:15726807-15727055	chr7	+	15726816	15727098	True	NM_001195280,NM_005924	chr7,chr7	+,-	LOC100506049,MEOX2	839406,-508
chr6:151717111-151718165	chr6	+	151717267	151718065	True	NM_020861,NM_024573	chr6,chr6	-,+	ZBTB2,C6orf211	-4590,55356
chr10:102988955-102989257	chr10	+	102988983	102989253	True	NM_006562,NR_029380	chr10,chr10	-,+	LBX1,FLJ41350	-266,97
chr12:102133400-102133614	chr12	+	102133399	102133494	True	NM_153694,NM_001177949,NM_001177948,NM_020244	chr12,chr12,chr12,chr12	-,-,-,+	SYCP3,SYCP3,SYCP3,CHPT1	-149,-149,-149,-42033
chr3:52531860-52533631	chr3	+	52531863	52533293	True	NM_015136,NM_001134231	chr3,chr3	+,-	STAB1,NT5DC2	-2558,34550
chr1:226741760-226742684	chr1	+	226741807	226742652	True	NM_001618,NM_001003665	chr1,chr1	-,+	PARP1,C1orf95	-146006,-5357
chr1:149857375-149857768	chr1	+	149857392	149857743	True	NM_175065,NM_003517,NM_003528	chr1,chr1,chr1	-,+,-	HIST2H2AB,HIST2H2AC,HIST2H2BE	1774,781,540
chr3:9852350-9854053	chr3	+	9852352	9853644	True	NR_037162,NM_133480,NM_001025930	chr3,chr3,chr3	+,-,+	TTLL3,TADA3,TTLL3	-759,-17932,-759
chr8:17757750-17758548	chr8	+	17757835	17758362	True	NM_006197,NM_201552,NM_201553,NM_147203,NM_004467	chr8,chr8,chr8,chr8,chr8	+,-,-,-,-	PCM1,FGL1,FGL1,FGL1,FGL1	22003,-4788,-4922,-4922,-4788
chr1:27996284-27997132	chr1	+	27996333	27997146	True	NM_022872,NM_002038,NM_022873,NM_001143912	chr1,chr1,chr1,chr1	-,-,-,+	IFI6,IFI6,IFI6,FAM76A	1636,1636,1636,55343
chr8:140716637-140716913	chr8	+	140716750	140716951	True	NM_016601,NM_017444	chr8,chr8	-,+	KCNK9,CHRAC1	-1451,804449
chr11:85340241-85341827	chr11	+	85340242	85341752	True	NR_036465,NM_001193537,NM_001193538,NM_001142699,NM_018480	chr11,chr11,chr11,chr11,chr11	+,+,+,-,+	TMEM126B,TMEM126B,TMEM126B,DLG2,TMEM126B	-671,-671,-671,-1928,-671
chr17:74579380-74580193	chr17	+	74579837	74580252	True	NM_006456,NR_004395	chr17,chr17	-,+	ST6GALNAC2,SNORD1A	1954,-22182
chr7:39774862-39776232	chr7	+	39775135	39775815	True	NM_138701,NR_026999	chr7,chr7	-,+	C7orf11,NCRNA00265	398486,-2024
chr11:120003331-120004109	chr11	+	120003396	120004081	True	NM_012101,NM_178507	chr11,chr11	-,+	TRIM29,OAF	4835,77665
chr2:73613653-73614167	chr2	+	73613732	73614190	True	NM_001965,NM_015120	chr2,chr2	-,+	EGR4,ALMS1	-92903,-897
chrX:152241920-152242167	chrX	+	152241947	152242201	True	NM_032882,NM_001170944	chrX,chrX	+,+	PNMA6A,LOC100287428	-1159,-1179
chrX:152241920-152242167	chrX	-	152244595	152244849	False	NM_032882,NM_001170944	chrX,chrX	-,+	PNMA6A,LOC100287428	1159,-3827
chrX:152241920-152242167	chrX	+	152339409	152339663	False	NM_032882	chrX	-	PNMA6A	-93451
chrX:152241920-152242167	chrX	-	152342057	152342311	False	NM_032882	chrX	-	PNMA6A	-96099
chr5:36066942-36067689	chr5	+	36067068	36067662	True	NM_174914,NM_005983,NM_001168316,NR_031764	chr5,chr5,chr5,chr5	-,+,-,-	UGT3A2,SKP2,UGT3A2,UGT3A2	-45,84526,-45,-45
chr9:71937059-71938478	chr9	+	71937310	71938347	True	NM_001127608,NM_004816,NM_002732	chr9,chr9,chr9	+,+,-	FAM189A2,FAM189A2,PRKACG	1140,5893,-308271
chr19:1883192-1883431	chr19	+	1883245	1883421	True	NM_079834,NM_001130111,NM_031213	chr19,chr19,chr19	+,-,-	SCAMP4,FAM108A1,FAM108A1	21951,2147,2147
chr2:167087255-167088152	chr2	+	167087347	167087997	True	NM_001079810,NM_001202435	chr2,chr2	+,-	XIRP2,SCN1A	656999,-81705
chr14:101032727-101033360	chr14	+	101032798	101033286	True	NR_024096,NM_001159531,NM_020836	chr14,chr14,chr14	+,-,-	C14orf70,BEGAIN,BEGAIN	90318,1171,2895
chr21:35984699-35986229	chr21	+	35984769	35986267	True	NM_203417,NM_004414,NM_053277	chr21,chr21,chr21	-,-,+	RCAN1,RCAN1,CLIC6	528,1165,55420
chr1:3774856-3775200	chr1	+	3774860	3775230	True	NM_004402,NM_014704	chr1,chr1	+,-	DFFB,KIAA0562	-1066,-1063
chr4:134071661-134071986	chr4	+	134071667	134072035	True	NM_032961,NM_001114734,NM_020815	chr4,chr4,chr4	+,-,+	PCDH10,PABPC4L,PCDH10	-1248,1050918,-1248
chr4:129996015-129996887	chr4	+	129996154	129996931	True	NM_173487,NM_144643	chr4,chr4	+,-	C4orf33,SCLT1	17897,17890
chr17:40906808-40908597	chr17	+	40906981	40908462	True	NR_024462,NR_024461,NM_001991,NM_005854	chr17,chr17,chr17,chr17	-,-,-,+	LOC100190938,LOC100190938,EZH1,RAMP2	4863,4863,-9910,4749
chr19:44418390-44420256	chr19	+	44418765	44420049	True	NM_003425,NM_013359	chr19,chr19	-,+	ZNF45,ZNF221	19416,35347
chr11:62342049-62342675	chr11	+	62342081	62342607	True	NM_001404,NM_000327	chr11,chr11	-,+	EEF1G,ROM1	-621,37605
chr3:121383847-121384714	chr3	+	121383891	121384709	True	NM_005335,NM_016298	chr3,chr3	-,+	HCLS1,FBXO40	-4100,-71772
chr1:206811712-206812315	chr1	+	206811948	206812212	True	NM_003582,NM_001004023,NM_006893	chr1,chr1,chr1	+,+,-	DYRK3,DYRK3,EIF2D	-3118,-3118,-26044
chr7:75572562-75574325	chr7	+	75572691	75574271	True	NM_031925,NR_002955	chr7,chr7	-,+	TMEM120A,SNORA14A	49778,-71
chr14:57080920-57081940	chr14	+	57081154	57081984	True	NM_017799,NM_172337	chr14,chr14	+,-	C14orf101,OTX2	-34695,190419
chr11:65431112-65432011	chr11	+	65431140	65431778	True	NM_021975,NM_153253,NM_001145138	chr11,chr11,chr11	-,+,-	RELA,SIPA1,RELA	-697,-23599,-697
chr14:65017190-65019061	chr14	+	65017385	65018873	True	NM_006977,NM_172365	chr14,chr14	-,+	ZBTB25,C14orf50	-46831,-819
chr22:38142969-38143690	chr22	+	38142973	38143739	True	NM_138797,NM_138632,NM_007032	chr22,chr22,chr22	-,+,+	ANKRD54,TRIOBP,TRIOBP	96664,-783,-783
chr12:123205447-123205795	chr12	+	123205559	123205835	True	NM_032554,NM_006018,NM_003677	chr12,chr12,chr12	-,-,+	GPR81,GPR109B,DENR	9344,-4120,31535
chr19:33852538-33853467	chr19	+	33852988	33853506	True	NM_001806,NM_004364	chr19,chr19	+,-	CEBPG,CEBPA	11102,-59558
chr11:61192149-61192771	chr11	+	61192277	61192801	True	NM_001136040,NM_001142565,NM_017841,NM_024811	chr11,chr11,chr11,chr11	-,-,+,-	CPSF7,CPSF7,SDHAF2,CPSF7	4713,4713,4795,4632
chr9:35826962-35828736	chr9	+	35827121	35828517	True	NM_001042589,NM_001012446,NM_001042590,NM_016446	chr9,chr9,chr9,chr9	+,-,+,+	TMEM8B,C9orf128,TMEM8B,TMEM8B	711,277,995,704
chr22:21638767-21639069	chr22	+	21638771	21638893	True	NR_003700,NR_024583	chr22,chr22	-,+	PI4KAP2,POM121L8P	232937,-2108
chr22:21638767-21639069	chr22	-	21480201	21480323	False	NR_037566,NR_002829	chr22,chr22	+,-	BCRP2,P2RX6P	-22947,-81663
chr22:21638767-21639069	chr22	+	18836046	18836168	False	NM_005675,NR_003267	chr22,chr22	+,-	DGCR6,GGT3P	57567,-56572
chr17:54670136-54670351	chr17	+	54670192	54670268	True	NM_001085430,NM_005450	chr17,chr17	-,+	C17orf67,NOG	223032,791
chr1:109586912-109588696	chr1	+	109587200	109588436	True	NM_001142550,NM_001142551,NM_014969,NM_020141	chr1,chr1,chr1,chr1	-,-,-,+	WDR47,WDR47,WDR47,TMEM167B	-2350,-2350,-2350,44966
chr22:39026229-39026793	chr22	+	39026247	39026640	True	NM_001002880,NM_001013647	chr22,chr22	+,-	CBY1,LOC646851	26017,26055
chr9:91923752-91924722	chr9	+	91924079	91924757	True	NM_016848,NM_001827,NR_036108,NM_024077	chr9,chr9,chr9,chr9	-,+,+,+	SHC3,CKS2,MIR3153,SECISBP2	-130397,1355,2382,8654
chr7:89994037-89994848	chr7	+	89994070	89994290	True	NM_006980,NM_033107	chr7,chr7	-,+	MTERF,GTPBP10	1515776,-18142
chr22:38055352-38055858	chr22	+	38055515	38055831	True	NM_020315,NM_006498	chr22,chr22	+,-	PDXP,LGALS2	-829,-79491
chr19:12901479-12901785	chr19	+	12901506	12901792	True	NM_002229,NM_005809	chr19,chr19	+,-	JUNB,PRDX2	517,10952
chr19:36643328-36643570	chr19	+	36643520	36643602	True	NM_001749,NM_001864	chr19,chr19	+,-	CAPNS1,COX7A1	-12653,219
chr14:100115300-100115986	chr14	+	100115370	100115761	True	NM_032425,NM_001127258,NM_001144995	chr14,chr14,chr14	+,+,-	HHIPL1,HHIPL1,CCDC85C	-3941,-3941,-44643
chr12:6898111-6898645	chr12	+	6898130	6898575	True	NM_000616,NM_001195014,NM_001195017,NM_001195016,NR_026581,NR_036545,NM_001195015	chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,+,+,-,+,+	CD4,CD4,CD4,CD4,MLF2,CD4,CD4	62,116,116,116,-35494,116,116
chr19:54664736-54664952	chr19	+	54664735	54664885	True	NM_014516,NM_024316	chr19,chr19	+,-	CNOT3,LENG1	-23350,-1289
chrX:139047910-139048380	chrX	+	139048218	139048294	True	NM_001013403,NM_000133	chrX,chrX	-,+	CXorf66,F9	-541,-435381
chr1:8386962-8388013	chr1	+	8387054	8387567	True	NM_001042682,NM_001080397	chr1,chr1	-,+	RERE,SLC45A1	96237,-2715
chr3:113233338-113233557	chr3	+	113233365	113233583	True	NM_144718,NM_017699	chr3,chr3	-,+	SPICE1,SIDT1	501,17634
chr9:135542844-135544248	chr9	+	135543014	135543845	True	NM_022779,NM_012204,NM_138620	chr9,chr9,chr9	-,+,-	DDX31,GTF3C4,DDX31	1994,1882,1994
chr19:52525624-52526187	chr19	+	52525883	52526175	True	NM_024840,NM_025040	chr19,chr19	+,-	ZNF613,ZNF614	-95246,5555
chr15:37109094-37109745	chr15	+	37109195	37109773	True	NR_027320,NM_032499	chr15,chr15	-,+	CSNK1A1P1,C15orf41	984,-176450
chr19:40230740-40231486	chr19	+	40230883	40231330	True	NM_203471,NM_001143832,NM_001828	chr19,chr19,chr19	+,+,-	LGALS14,LEUTX,CLC	-35988,35903,-2215
chr11:125758586-125759347	chr11	+	125758727	125759352	True	NM_001134793,NM_145014,NM_031307	chr11,chr11,chr11	+,+,-	HYLS1,HYLS1,PUS3	-1832,-5278,13815
chr2:234217366-234217678	chr2	+	234217444	234217696	True	NM_000541,NM_018218	chr2,chr2	+,-	SAG,USP40	-1194,256590
chr7:150776411-150776878	chr7	+	150776415	150776773	True	NM_031434,NM_031946,NM_001042535,NM_001136044,NM_033015,NM_006712	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,-,-,-	TMUB1,AGAP3,AGAP3,TMUB1,FASTK,FASTK	3690,7052,7052,3897,1228,1228
chr12:15474439-15475484	chr12	+	15474592	15475482	True	NM_002848,NM_032918,NM_030667	chr12,chr12,chr12	+,-,+	PTPRO,RERG,PTPRO	4,-100181,4
chr1:220222447-220224269	chr1	+	220222672	220224252	True	NM_004446,NM_018060	chr1,chr1	-,+	EPRS,IARS2	-2672,43202
chr19:55973439-55974088	chr19	+	55973461	55973997	True	NM_024710,NM_033113,NM_001136202,NM_001136201	chr19,chr19,chr19,chr19	-,+,-,-	ISOC2,ZNF628,ISOC2,ISOC2	-412,13701,-412,-412
chr7:76782088-76783794	chr7	+	76782097	76783541	True	NM_020879,NM_006682	chr7,chr7	+,-	CCDC146,FGL2	-30221,45670
chr5:153780879-153781607	chr5	+	153781027	153781538	True	NR_037897,NM_001131062	chr5,chr5	-,+	FLJ38109,SAP30L	43901,43978
chr9:113008114-113009525	chr9	+	113008513	113009300	True	NM_001136562,NM_003329	chr9,chr9	+,-	AKAP2,TXN	-120787,9535
chr16:2315777-2316602	chr4	-	11372987	11373038	True	NR_030298,NM_005114	chr4,chr4	+,-	MIR572,HS3ST1	-2588,57550
chr6:6008261-6008953	chr6	+	6008363	6008680	True	NM_016588,NM_004271	chr6,chr6	-,+	NRN1,LY86	-730,580253
chr2:26105635-26107279	chr2	+	26106119	26107114	True	NM_018263,NM_016131	chr2,chr2	-,+	ASXL2,RAB10	-4807,149614
chr14:92585036-92586740	chr14	+	92585667	92586646	True	NM_004545,NM_017437	chr14,chr14	-,+	NDUFB1,CPSF2	1557,1651
chr17:3819878-3820198	chr17	+	3819877	3820235	True	NM_002558,NM_031965	chr17,chr17	-,+	P2RX1,GSG2	83,-192731
chr2:88361480-88362450	chr2	+	88361506	88362083	True	NM_016618,NM_198274	chr2,chr2	-,+	KRCC1,SMYD1	-6258,5215
chr7:103074308-103075946	chr7	+	103074586	103075982	True	NM_206883,NM_002803	chr7,chr7	-,+	SLC26A5,PSMC2	10692,-86672
chr1:154945841-154946606	chr1	+	154946013	154946499	True	NM_025207,NM_001202859,NM_001826,NR_036212,NM_001184892,NM_001184891,NR_024163,NM_001130041,NM_001130040,NM_183001,NM_201398,NM_003029	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,-,+,+,+,+,+,-,-,-,+,-	FLAD1,SHC1,CKS1B,MIR4258,FLAD1,FLAD1,CKS1B,SHC1,SHC1,SHC1,FLAD1,SHC1	9270,510,618,1669,9270,9270,618,510,-2790,-2790,9270,510
chr17:30668962-30669237	chr17	+	30669012	30669276	True	NM_001098507,NM_001032293,NR_030362,NM_022344,NM_003457	chr17,chr17,chr17,chr17,chr17	+,+,+,-,+	ZNF207,ZNF207,MIR632,C17orf75,ZNF207	7880,7880,7851,37,7880
chr2:223164633-223164917	chr2	+	223164635	223164915	True	NM_013942,NM_153038,NM_181461,NM_001127366,NM_181460,NM_181457,NM_000438,NM_181458,NM_181459	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	-,+,-,-,-,-,-,-,-	PAX3,CCDC140,PAX3,PAX3,PAX3,PAX3,PAX3,PAX3,PAX3	-920,-1828,-920,-920,-920,-920,-920,-920,-920
chrX:10629646-10630265	chrX	+	10629730	10630077	True	NM_001122608,NM_001098624	chrX,chrX	+,-	HCCS,MID1	499328,15753
chr15:80693367-80693893	chr15	+	80693695	80693916	True	NM_014862,NR_033833	chr15,chr15	+,-	ARNT2,LOC283688	2775,-59548
chr9:88880187-88881682	chr9	+	88880252	88881623	True	NM_024635,NM_001010907	chr9,chr9	+,-	NAA35,C9orf153	-324247,-5733
chr2:231162996-231164550	chr2	+	231163032	231164588	True	NM_138402,NM_001185015	chr2,chr2	+,-	SP140L,SP110	27305,-72588
chr14:24548936-24549664	chr14	+	24548950	24549644	True	NM_006177,NM_006032	chr14,chr14	-,+	NRL,CPNE6	4238,-8245
chr10:696933-697192	chr10	+	697031	697211	True	NR_027152,NR_027151,NM_014974	chr10,chr10,chr10	+,+,-	C10orf108,C10orf108,DIP2C	-1065,-1194,38447
chr8:22407163-22408522	chr8	+	22407254	22408450	True	NR_027715,NM_005775	chr8,chr8	-,+	FLJ14107,SORBS3	91322,800
chr8:145058728-145059327	chr8	+	145058733	145059355	True	NM_000837,NM_032789,NM_001009184,NM_000445	chr8,chr8,chr8,chr8	+,-,+,-	GRINA,PARP10,GRINA,PLEC	4870,1330,4870,-7820
chr2:75186162-75186402	chr2	+	75186168	75186450	True	NM_019896,NM_001058	chr2,chr2	+,-	POLE4,TACR1	-444,240245
chr8:67050127-67051501	chr8	+	67050129	67051498	True	NM_000756,NM_184087	chr8,chr8	-,+	CRH,TRIM55	39398,-10902
chr20:62105088-62105878	chr20	+	62105218	62105828	True	NM_172106,NM_172107,NM_024299,NM_172108,NM_172109,NM_004518	chr20,chr20,chr20,chr20,chr20,chr20	-,-,+,-,-,-	KCNQ2,KCNQ2,PPDPF,KCNQ2,KCNQ2,KCNQ2	-1225,-1225,46304,-1225,-1225,-1225
chr22:37639564-37639989	chr22	+	37639601	37639945	True	NM_013385,NM_002872	chr22,chr22	+,-	CYTH4,RAC2	38549,410
chr20:5734222-5735421	chr20	+	5734293	5735422	True	NM_019593,NM_152504	chr20,chr20	-,+	GPCPD1,C20orf196	-142621,-3301
chr18:14360631-14361369	chr18	+	14360630	14361416	True	NR_024076,NR_026756	chr18,chr18	-,+	CXADRP3,LOC284233	137339,-23259
chr3:137896987-137898495	chr3	+	137897334	137898290	True	NM_014154,NM_016216,NM_213654,NM_015396	chr3,chr3,chr3,chr3	+,-,+,+	ARMC8,DBR1,ARMC8,ARMC8	7857,-3543,7857,7857
chr17:40993004-40993564	chr17	+	40993302	40993565	True	NM_001158,NM_003734,NM_176863,NM_009590,NM_005789,NM_003766	chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,-	AOC2,AOC3,PSME3,AOC2,PSME3,BECN1	3043,9635,-7936,3043,-7936,-16992
chr20:50384305-50384573	chr20	+	50384437	50384557	True	NM_006045,NM_014484	chr20,chr20	-,+	ATP9A,MOCS3	401,-809135
chr1:167483962-167484564	chr1	+	167484023	167484551	True	NM_052862,NM_000734,NM_198053	chr1,chr1,chr1	+,-,-	RCSD1,CD247,CD247	114922,3346,3346
chr18:68892279-68893893	chr18	+	68892282	68893926	True	NM_173630,NM_004232	chr18,chr18	-,+	RTTN,SOCS6	-1019320,-936196
chr6:144010988-144012531	chr6	+	144011182	144012559	True	NM_001100165,NR_027113	chr6,chr6	+,-	PHACTR2,LOC285740	-12134,-120706
chr5:34172533-34172983	chr6	+	58242901	58243097	False	NM_000947,NR_003660	chr6,chr6	+,-	PRIM2,GUSBP4	-1060543,44687
chr5:34172533-34172983	chr6	+	26843398	26843667	False	NR_003504,NR_026775	chr6,chr6	-,+	GUSBL1,NCRNA00240	80729,81104
chr5:34172533-34172983	chr5	+	34172628	34173030	True	NM_016568,NR_037951	chr5,chr5	+,-	RXFP3,C1QTNF3-AMACR	-236195,-47995
chr5:34172533-34172983	chr5	-	20696197	20696466	False	NR_027027,NM_004934	chr5,chr5	+,-	GUSBP1,CDH18	763122,-707844
chr18:14392786-14393199	chr18	+	14392979	14393073	True	NR_024076,NR_026756	chr18,chr18	-,+	CXADRP3,LOC284233	105682,-55608
chr1:20616949-20617281	chr1	+	20616954	20617272	True	NM_001105572,NM_001039500	chr1,chr1	-,+	PLA2G2C,VWA5B1	-115267,139
chr17:76222785-76223062	chr17	+	76222792	76223094	True	NM_001204210,NR_002219,NM_001204211,NM_001204212	chr17,chr17,chr17,chr17	+,-,+,+	TMEM235,EPR1,TMEM235,TMEM235	4296,-2009,4296,4296
chr19:54724899-54725380	chr19	+	54724924	54725288	True	NM_001013,NM_001081450,NM_006864	chr19,chr19,chr19	+,-,-	RPS9,LILRB3,LILRB3	-20249,1721,1721
chr19:54724899-54725380	chr19	+	54744676	54745040	False	NM_001013,NM_024318	chr19,chr19	+,-	RPS9,LILRA6	-40001,1734
chr19:40337208-40338452	chr19	+	40337239	40338365	True	NM_001143832,NM_001436	chr19,chr19	+,-	LEUTX,FBL	-70056,-185
chr11:60257952-60258587	chr11	+	60258062	60258334	True	NM_022349,NM_017716,NM_001164470	chr11,chr11,chr11	-,+,+	MS4A6A,MS4A12,MS4A12	-307388,1916,1916
chr8:144327901-144328204	chr8	+	144328052	144328122	True	NM_173832,NM_001130478	chr8,chr8	+,-	ZFP41,LY6H	986,-85999
chr2:130941830-130942687	chr2	+	130941871	130942433	True	NM_017951,NM_025029,NM_017751,NR_033232,NR_033231,NR_033230,NM_001171083	chr2,chr2,chr2,chr2,chr2,chr2,chr2	-,+,-,-,-,-,-	SMPD4,MZT2B,SMPD4,SMPD4,SMPD4,SMPD4,SMPD4	-2541,-2421,-2541,-2541,-2541,-1548,-2541
chr5:40801476-40802703	chr5	+	40802037	40802692	True	NM_032587,NM_006251,NM_206907	chr5,chr5,chr5	+,-,-	CARD6,PRKAA1,PRKAA1	38717,-3740,-3740
chr7:64024346-64024888	chr7	+	64024590	64024796	True	NM_178558,NM_001130022,NR_033245	chr7,chr7,chr7	-,-,+	ZNF680,ZNF680,LOC641746	-1085,-1085,18191
chrX:66827163-66827810	chrX	+	66827178	66827806	True	NM_001011645,NM_002547	chrX,chrX	+,-	AR,OPHN1	-38546,825543
chr22:18509856-18510695	chr22	+	18509935	18510530	True	NM_001136004,NM_015241,NR_024417,NM_001122731	chr22,chr22,chr22,chr22	-,-,+,-	MICAL3,MICAL3,FLJ41941,MICAL3	-2610,-2610,1620,-2610
chr1:13424016-13424528	chr1	+	13424321	13424383	True	NM_001098376,NM_001024661,NM_001010890	chr1,chr1,chr1	+,-,+	PRAMEF15,PRAMEF13,PRAMEF9	-3196,28323,-3196
chr1:13424016-13424528	chr1	-	12888268	12888330	False	NM_023014,NM_001146344	chr1,chr1	+,-	PRAMEF2,PRAMEF11	28610,2984
chr1:13424016-13424528	chr1	+	13645118	13645180	False	NM_001099854,NM_001098376,NM_001010890	chr1,chr1,chr1	-,+,+	PRAMEF14,PRAMEF15,PRAMEF9	28381,-3196,-3196
chr22:25082094-25082832	chr22	+	25082143	25082658	True	NR_024593,NR_024494	chr22,chr22	-,+	POM121L10P,BCRP3	-27029,-53313
chr10:74915117-74915447	chr10	+	74915147	74915315	True	NM_173348,NM_001135752	chr10,chr10	+,-	FAM149B1,ECD	12561,12596
chr11:776668-776916	chr11	+	776677	776769	True	NM_006755,NM_182612	chr11,chr11	+,-	TALDO1,PDDC1	-29296,768
chr19:54802190-54802403	chr19	+	54802191	54802253	True	NM_001172654,NM_001013,NM_006865	chr19,chr19,chr19	-,+,-	LILRA3,RPS9,LILRA3	2018,-97516,2062
chr11:64110066-64110392	chr11	+	64110096	64110330	True	NM_032251,NM_016404	chr11,chr11	+,-	CCDC88B,TRMT112	-2457,-25063
chr22:23873259-23874528	chr22	+	23873481	23874473	True	NM_153615,NM_020070	chr22,chr22	+,-	RGL4,IGLL1	158574,48072
chr11:1245514-1245846	chr11	+	1245584	1245684	True	NM_019009,NM_002458	chr11,chr11	-,+	TOLLIP,MUC5B	85258,-1340
chr11:111743791-111745194	chr11	+	111743892	111745201	True	NM_138378,NM_001077690,NM_001077691,NM_024740,NM_022761,NM_001077692	chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,+,-	FDXACB1,ALG9,ALG9,ALG9,C11orf1,ALG9	5003,-1587,-1888,-1587,4746,-1888
chr17:34839564-34840056	chr17	+	34839792	34840000	True	NM_004773,NM_001040282	chr17,chr17	+,-	ZNHIT3,TBC1D3G	2472,-31689
chr8:30585902-30586751	chr8	+	30586460	30586750	True	NM_001195103,NM_001195102,NM_000637,NM_005671,NM_001195104	chr8,chr8,chr8,chr8,chr8	-,-,-,+,-	GSR,GSR,GSR,UBXN8,GSR	-974,-974,-974,14939,-974
chrY:1664589-1664950	chrY	+	1664597	1664963	True	NM_004043,NR_027383,NM_005088,NM_178129	chrY,chrY,chrY,chrY	+,+,+,-	ASMT,AKAP17A,AKAP17A,P2RY8	-300,-4162,-4162,-58560
chrY:1664589-1664950	chrX	+	1714597	1714963	False	NM_004043,NR_027383,NM_005088,NM_178129	chrX,chrX,chrX,chrX	+,+,+,-	ASMT,AKAP17A,AKAP17A,P2RY8	-300,-4162,-4162,-58560
chrX:55189991-55191325	chrX	+	55190110	55191360	True	NM_138362,NM_001166702,NR_030722,NM_001166700,NM_001166699,NM_130467,NM_001166704,NM_001166701,NM_001166703	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,+,-,-,-	FAM104B,FAM104B,FAM104B,FAM104B,FAM104B,PAGE5,FAM104B,FAM104B,FAM104B	-2482,-2543,-2482,-2482,-2482,55430,-2482,-2482,-2575
chr1:108781255-108782986	chr1	+	108781409	108782957	True	NM_001143987,NM_001143989	chr1,chr1	+,-	NBPF6,NBPF4	209946,3796
chr1:108781255-108782986	chr1	-	108922170	108923718	False	NM_001143987,NM_001143989	chr1,chr1	+,-	NBPF6,NBPF4	69185,-135467
chr1:108781255-108782986	chr1	-	108996631	108998179	False	NM_001102592,NM_001143987,NM_001143988	chr1,chr1,chr1	-,+,+	HENMT1,NBPF6,NBPF6	205615,-3778,-3778
chr16:50710332-50710959	chr16	+	50710364	50710820	True	NM_153337,NM_022162,NM_182854,NM_001144972	chr16,chr16,chr16,chr16	-,+,-,-	SNX20,NOD2,SNX20,SNX20	4494,20229,4494,4494
chr11:2322541-2322995	chr11	+	2322655	2322911	True	NM_139022,NM_001142946,NR_024621	chr11,chr11,chr11	+,-,-	TSPAN32,C11orf21,C11orf21	331,282,282
chr12:12511175-12511605	chr12	+	12511209	12511591	True	NM_058169,NM_018050,NR_024061	chr12,chr12,chr12	+,-,-	LOH12CR1,MANSC1,LOH12CR2	-1248,-8040,-1208
chr5:94402762-94404313	chr5	+	94402875	94404339	True	NM_152548,NM_001002796	chr5,chr5	+,-	FAM81B,MCTP1	322708,13256
chr16:687152-687505	chr16	+	687494	687554	True	NM_001040165,NM_138418,NM_001040161,NM_001040162,NM_053284,NM_001040160,NM_032366	chr16,chr16,chr16,chr16,chr16,chr16,chr16	-,+,-,-,+,-,-	C16orf13,FAM195A,C16orf13,C16orf13,WFIKKN1,C16orf13,C16orf13	-1147,4294,-1147,-1147,-6533,-1147,-1147
chr16:67144056-67144417	chr16	+	67144062	67144454	True	NM_025187,NM_033309	chr16,chr16	+,-	C16orf70,B3GNT9	-198,40498
chr9:86573603-86574829	chr9	+	86573895	86574737	True	NM_024945,NM_032307	chr9,chr9	+,-	RMI1,C9orf64	20899,-2232
chr14:102269983-102271700	chr14	+	102270669	102271424	True	NM_002719,NM_178587,NM_178586,NR_031649	chr14,chr14,chr14,chr14	+,+,+,-	PPP2R5C,PPP2R5C,PPP2R5C,MIR1247	4715,4715,4715,-243910
chr2:73114873-73115079	chr2	+	73114948	73115110	True	NM_003124,NM_015189	chr2,chr2	+,-	SPR,EXOC6B	-487,-61771
chr15:75615374-75615779	chr15	+	75615420	75615593	True	NR_030360,NM_017828	chr15,chr15	-,+	MIR631,COMMD4	30496,12780
chr3:125240416-125240678	chr3	+	125240420	125240614	True	NR_024250,NM_003794	chr3,chr3	+,-	LOC100125556,SNX4	394829,-1362
chr1:110158448-110159963	chr1	+	110158509	110159793	True	NM_139156,NM_005272,NM_203404,NM_004037	chr1,chr1,chr1,chr1	+,-,+,+	AMPD2,GNAT2,AMPD2,AMPD2	2665,-2804,8255,3482
chr6:10699714-10701400	chr6	+	10699725	10700896	True	NM_001145020,NR_026736,NR_026737,NM_017906	chr6,chr6,chr6,chr6	-,-,-,+	C6orf52,C6orf52,C6orf52,PAK1IP1	-4886,-4695,-4886,-4588
chr1:1108562-1108818	chr1	+	1108576	1108700	True	NR_029834,NM_153254,NR_029957,NM_004195,NM_001130045,NR_029639	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,-,+,+	MIR200A,TTLL10,MIR429,TNFRSF18,TTLL10,MIR200B	-5384,6376,-4242,33439,585,-6143
chr7:98924522-98925914	chr7	+	98924625	98925689	True	NM_014891,NM_006409,NM_001190996	chr7,chr7,chr7	-,+,+	PDAP1,ARPC1A,ARPC1A	80666,-1183,-1183
chr4:120344853-120346622	chr4	+	120345834	120345887	True	NR_037596,NR_037630	chr4,chr4	-,+	FLJ14186,LOC645513	-14019,30050
chr4:120344853-120346622	chr4	-	119536989	119537042	False	NM_014822,NM_020961	chr4,chr4	-,+	SEC24D,METTL14	220337,69531
chr2:24850888-24852834	chr2	+	24851361	24852579	True	NM_147233,NM_001013663	chr2,chr2	+,-	NCOA1,C2orf79	-44075,163722
chrX:18238726-18239011	chrX	+	18238794	18239012	True	NM_153346,NM_001184767,NM_003159	chrX,chrX,chrX	-,-,+	BEND2,BEND2,CDKL5	62,62,204712
chr1:172411177-172411414	chr1	+	172411183	172411379	True	NM_153747,NM_002642,NM_139240	chr1,chr1,chr1	-,-,+	PIGC,PIGC,C1orf105	1901,1901,-21406
chr14:98640475-98642337	chr14	+	98640620	98642362	True	NR_015430,NM_182560	chr14,chr14	-,+	C14orf64,C14orf177	-196159,535587
chr13:111561255-111562963	chr13	+	111561314	111562996	True	NM_017664,NM_005537	chr13,chr13	-,+	ANKRD10,ING1	4470,-194006
chr6:58291136-58292159	chr6	+	58292095	58292175	True	NM_000947,NR_003660	chr6,chr6	+,-	PRIM2,GUSBP4	-1109733,-4371
chr21:34966008-34967107	chr21	+	34966360	34967156	True	NM_001001132,NM_017613	chr21,chr21	+,-	ITSN1,DONSON	47627,-5346
chr3:52917224-52918352	chr3	+	52917223	52918257	True	NM_001198974,NM_002217	chr3,chr3	-,+	TMEM110-MUSTN1,ITIH3	13401,-88495
chr7:28473715-28475119	chr7	+	28474379	28475164	True	NM_004904,NM_175061	chr7,chr7	+,-	CREB5,JAZF1	69,-253942
chrX:47486972-47487175	chrX	+	47487019	47487217	True	NM_001145252,NM_133499,NM_006950,NM_002621,NR_028119	chrX,chrX,chrX,chrX,chrX	-,-,-,-,+	CFP,SYN1,SYN1,CFP,LOC100133957	2202,-7763,-7763,2537,31014
chr2:27068311-27069184	chr2	+	27068420	27069184	True	NM_020134,NM_001029881	chr2,chr2	+,-	DPYSL5,CIB4	1784,-204209
chr12:41091931-41092331	chr12	+	41091932	41092022	True	NM_175038,NM_001843,NM_052885	chr12,chr12,chr12	+,+,-	CNTN1,CNTN1,SLC2A13	-5625,-5625,-592271
chr18:33546266-33547784	chr18	+	33546314	33547456	True	NR_029616,NM_031446,NM_001201476,NM_001201475,NM_001201474	chr18,chr18,chr18,chr18,chr18	-,+,+,+,+	MIR187,C18orf21,C18orf21,C18orf21,C18orf21	-61425,5131,5131,5131,5131
chr15:55606216-55606559	chr15	+	55606378	55606607	True	NM_004855,NM_183235	chr15,chr15	+,-	PIGB,RAB27A	4525,-24377
chr16:67314104-67314547	chr16	+	67314381	67314559	True	NM_013241,NM_015432,NM_001129728,NM_001129729,NM_001129727,NM_001129731	chr16,chr16,chr16,chr16,chr16,chr16	-,+,+,+,+,+	FHOD1,PLEKHG4,PLEKHG4,PLEKHG4,PLEKHG4,PLEKHG4	-32956,-3019,-1382,-943,-2356,-940
chr17:28661774-28662449	chr17	+	28661823	28662405	True	NM_206832,NM_001304	chr17,chr17	-,+	TMIGD1,CPD	-758,43536
chr10:114711420-114711819	chr10	+	114711516	114711764	True	NM_030756,NM_001146283,NM_001198531,NM_001198530,NM_001146284,NM_001146285,NM_001146286,NM_001198526,NM_001198527,NM_001198525,NM_022494,NM_001198528,NM_001198529,NM_001146274	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,+,+,+,+,+,-,+,+,+	TCF7L2,TCF7L2,TCF7L2,TCF7L2,TCF7L2,TCF7L2,TCF7L2,TCF7L2,TCF7L2,TCF7L2,ZDHHC6,TCF7L2,TCF7L2,TCF7L2	-1558,-1558,-1558,-1558,-1558,-1558,-1558,-1558,-1558,-1558,-504844,-1558,-1558,-1558
chr19:543766-544035	chr19	+	543863	543957	True	NM_005317,NM_182577	chr19,chr19	+,-	GZMM,ODF3L2	69,-68880
chr12:133404924-133405164	chr12	+	133404937	133405185	True	NM_001172557,NM_005895,NM_001170544	chr12,chr12,chr12	-,-,+	GOLGA3,GOLGA3,PGAM5	291,153,-117595
chr7:140902618-140904295	chr7	+	140902832	140903856	True	NM_053035,NM_001195278	chr7,chr7	-,+	MRPS33,LOC100131199	-188051,-128852
chr11:117694483-117695342	chr11	+	117694671	117695227	True	NM_001680,NM_001558,NM_021603	chr11,chr11,chr11	-,+,-	FXYD2,IL10RA,FXYD2	282,161878,3630
chr7:73500254-73500780	chr7	+	73500280	73500371	True	NM_002314,NM_001204426,NM_002914	chr7,chr7,chr7	+,+,-	LIMK1,LIMK1,RFC2	-2232,7114,168424
chr2:128568877-128569147	chr2	+	128568894	128569194	True	NM_032740,NM_018383,NM_001006622,NM_001006623	chr2,chr2,chr2,chr2	+,-,-,-	SFT2D3,WDR33,WDR33,WDR33	-110348,-133,-133,-133
chr14:23401581-23401851	chr14	+	23401632	23401746	True	NM_006109,NM_173527,NM_001039619	chr14,chr14,chr14	-,+,-	PRMT5,REM2,PRMT5	-2971,-49254,-2971
chr19:48325560-48325846	chr19	+	48325574	48325820	True	NM_000554,NM_198479	chr19,chr19	+,-	CRX,TPRX1	-526,-18713
chr1:89358866-89359180	chr1	+	89358924	89359125	True	NM_006256,NM_001514	chr1,chr1	+,-	PKN2,GTF2B	-209053,-1623
chr4:187163389-187164074	chr4	+	187163418	187164116	True	NR_033900,NM_000892	chr4,chr4	-,+	LOC285441,KLKB1	258148,-14797
chr4:4143185-4144675	chr4	+	4143351	4144011	True	NM_145291,NM_177998	chr4,chr4	+,-	ZBTB49,OTOP1	147912,84660
chr12:65562045-65563032	chr12	+	65562045	65563041	True	NM_001167614,NM_007191,NM_014319	chr12,chr12,chr12	+,-,+	LEMD3,WIF1,LEMD3	309,-46699,309
chr11:22363984-22364415	chr11	+	22364045	22364432	True	NM_020346,NM_022725	chr11,chr11	+,-	SLC17A6,FANCF	-4429,283005
chr8:102506373-102506633	chr8	+	102506499	102506569	True	NM_016096,NM_024915	chr8,chr8	-,+	ZNF706,GRHL2	-288539,-1882
chr1:100625125-100626339	chr1	+	100625239	100626139	True	NM_144620,NM_019083	chr1,chr1	-,+	LRRC39,CCDC76	17682,-26598
chr19:1437502-1437997	chr19	+	1437657	1438033	True	NM_138924,NM_001018	chr19,chr19	-,+	GAMT,RPS15	-36105,329
chr7:89875418-89876881	chr7	+	89875527	89876752	True	NM_001039706,NM_001160138,NM_152706	chr7,chr7,chr7	+,+,-	C7orf63,C7orf63,C7orf62	-1090,-1090,-1450496
chrX:118710270-118710556	chrX	+	118710520	118710611	True	NM_181762,NM_003336,NM_181777,NM_022101	chrX,chrX,chrX,chrX	+,+,+,-	UBE2A,UBE2A,UBE2A,CXorf56	-2082,-2082,3686,-11123
chr16:3403520-3404278	chr16	+	3403841	3404337	True	NM_012368,NM_001190476	chr16,chr16	+,-	OR2C1,MTRNR2L4	1551,18006
chr17:60882849-60884409	chr17	+	60882849	60884450	True	NM_001100875,NM_152598,NR_036146	chr17,chr17,chr17	-,-,+	MARCH10,MARCH10,MIR548W	-148,1310,-84044
chr5:136835138-136836708	chr5	+	136836274	136836656	True	NM_004598,NR_002713	chr5,chr5	-,+	SPOCK1,NPY6R	-1256,300225
chr1:145434020-145434328	chr1	+	145434019	145434171	True	NM_006472,NM_032305	chr1,chr1	+,-	TXNIP,POLR3GL	4290,36274
chr11:1688102-1688500	chr11	+	1688121	1688318	True	NR_026642,NR_026643	chr11,chr11	-,+	FAM99B,FAM99A	18592,-1343
chr11:1688102-1688500	chr11	-	1704877	1705074	False	NR_026642,NM_001012416	chr11,chr11	-,+	FAM99B,KRTAP5-6	1835,13350
chr9:134958486-134958972	chr9	+	134958823	134958961	True	NM_032536,NM_004269	chr9,chr9	+,-	NTNG2,MED27	78372,-3570
chr12:49719633-49719938	chr12	+	49719722	49719986	True	NM_001100620,NM_001008223,NM_005480	chr12,chr12,chr12	+,-,+	TROAP,C1QL4,TROAP	-2802,11035,-2802
chr1:212220999-212221622	chr1	+	212221163	212221469	True	NM_016448,NR_037667	chr1,chr1	+,-	DTL,INTS7	-12303,-12161
chr11:128563644-128563954	chr11	+	128563678	128563998	True	NM_001167681,NM_002017,NM_001143820	chr11,chr11,chr11	+,+,-	FLI1,FLI1,ETS1	52,54,-106225
chr3:127390153-127390431	chr3	+	127390271	127390465	True	NR_033428,NR_033429,NM_172027,NM_001142646	chr3,chr3,chr3,chr3	+,+,+,-	ABTB1,ABTB1,ABTB1,TPRA1	1315,1315,1315,-80703
chr3:45871905-45873447	chr3	+	45871911	45873342	True	NM_020347,NM_006641	chr3,chr3	-,+	LZTFL1,CCR9	10329,54653
chr17:33923262-33923617	chr17	+	33923285	33923525	True	NM_001282,NM_001030006,NM_000286	chr17,chr17,chr17	+,+,-	AP2B1,AP2B1,PEX12	-9054,-9054,-17629
chr9:130830022-130830245	chr9	+	130830028	130830236	True	NM_197956,NM_001006641	chr9,chr9	-,+	NAIF1,SLC25A25	-429,242
chr10:69235756-69237113	chr10	+	69235891	69237065	True	NM_001127384,NM_012238	chr10,chr10	-,+	CTNNA3,SIRT1	188401,407361
chr6:32097995-32098398	chr6_mcf_hap5	+	3477878	3478072	False	NM_001136153,NM_138717,NM_022110,NM_004381	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	-,+,-,-	ATF6B,PPT2,FKBPL,ATF6B	-2033,22979,-11,-2033
chr6:32097995-32098398	chr6_dbb_hap3	+	3377222	3377416	False	NM_001136153,NM_138717,NM_022110,NM_004381	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	-,+,-,-	ATF6B,PPT2,FKBPL,ATF6B	-2033,22985,-11,-2033
chr6:32097995-32098398	chr6	+	32098050	32098244	True	NM_001136153,NM_138717,NM_022110,NM_004381	chr6,chr6,chr6,chr6	-,+,-,-	ATF6B,PPT2,FKBPL,ATF6B	-2033,22984,-11,-2033
chr6:32097995-32098398	chr6_cox_hap2	+	3568710	3568904	False	NM_001136153,NM_138717,NM_022110,NM_004381	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	-,+,-,-	ATF6B,PPT2,FKBPL,ATF6B	-2033,22992,-11,-2033
chr1:223194248-223194651	chr1	+	223194411	223194639	True	NM_032890,NM_003268	chr1,chr1	+,-	DISP1,TLR5	-206032,122035
chr4:159460469-159462114	chr4	+	159460673	159462014	True	NM_001008393,NM_021634	chr4,chr4	-,+	C4orf46,RXFP1	131238,-17686
chr14:50052007-50052733	chr14	+	50052121	50052777	True	NM_001030001,NR_037792,NM_001032	chr14,chr14,chr14	-,+,-	RPS29,LRR1,RPS29	367,12637,367
chr17:28445972-28446818	chr17	+	28446050	28446866	True	NR_036149,NM_032141,NR_029945	chr17,chr17,chr17	-,+,+	MIR3184,CCDC55,MIR423	-1872,-2273,-2010
chr11:1651248-1651826	chr11	+	1651513	1651823	True	NM_001012709,NM_001001480	chr11,chr11	-,+	KRTAP5-4,KRTAP5-5	-8145,-531
chr3:4793076-4793368	chr3	+	4793138	4793369	True	NR_004428,NM_003670	chr3,chr3	-,+	EGOT,BHLHE40	0,227727
chr12:121838299-121838519	chr12	+	121838326	121838510	True	NM_001137559,NM_194271,NM_025126	chr12,chr12,chr12	-,+,+	ANAPC5,RNF34,RNF34	-46314,-475,-475
chr1:156337903-156338583	chr1	+	156337912	156338306	True	NR_036565,NM_020407,NR_026549	chr1,chr1,chr1	-,+,+	CCT3,RHBG,RHBG	-29706,696,696
chr22:38143930-38144374	chr22	+	38144015	38144365	True	NM_138797,NM_138632,NM_007032	chr22,chr22,chr22	-,+,+	ANKRD54,TRIOBP,TRIOBP	96038,-1825,-1825
chr5:114507052-114508355	chr5	+	114507117	114508022	True	NM_001284,NM_001017398,NM_001017397,NM_018700	chr5,chr5,chr5,chr5	+,-,-,-	AP3S1,TRIM36,TRIM36,TRIM36	669596,8284,8284,8284
chrX:24048896-24049566	chrX	+	24048923	24049411	True	NM_030624,NM_001415	chrX,chrX	-,+	KLHL15,EIF2S3	-3620,23653
chr8:26154911-26156235	chr8	+	26154933	26156080	True	NM_001177591,NM_007257,NM_002717	chr8,chr8,chr8	+,-,+	PPP2R2A,PNMA2,PPP2R2A	-4260,215466,-5985
chr1:25574550-25576487	chr1	+	25574722	25576454	True	NM_001127691,NM_020317	chr1,chr1	+,-	RHD,C1orf63	22526,-737
chrX:48686527-48687052	chrX	+	48686770	48687070	True	NM_181532,NM_013271	chrX,chrX	+,-	ERAS,PCSK1N	212,6940
chr9:76089963-76090325	chr9	+	76089970	76090364	True	NM_000689,NM_000700	chr9,chr9	-,+	ALDH1A1,ANXA1	-521737,-323240
chr4:461788-463762	chr4	+	462247	463663	True	NR_002451,NM_001127178	chr4,chr4	-,+	ABCA11P,PIGG	4396,29325
chr19:698159-698522	chr19	+	698191	698413	True	NM_214710,NM_001040134	chr19,chr19	-,+	PRSS57,PALM	-2730,10539
chr15:34787272-34787472	chr15	+	34787391	34787489	True	NM_175741,NR_036050	chr15,chr15	+,-	C15orf55,MIR1233-1	-149376,33133
chr17:8216288-8217067	chr17	+	8216395	8217067	True	NM_025014,NM_201520,NM_173728	chr17,chr17,chr17	+,-,+	ARHGEF15,SLC25A35,ARHGEF15	-2306,-18225,-2890
chr21:46117389-46118060	chr21	+	46117457	46118003	True	NM_198699,NM_144991	chr21,chr21	+,-	KRTAP10-12,TSPEAR	-421,13542
chrX:48328992-48330342	chrX	+	48329318	48330302	True	NM_012280,NM_033518,NM_177439,NM_177434	chrX,chrX,chrX,chrX	+,-,+,+	FTSJ1,SLC38A5,FTSJ1,FTSJ1	4246,-674,4246,6077
chr12:50026384-50026660	chr12	+	50026489	50026629	True	NM_012272,NM_001031698,NM_032130	chr12,chr12,chr12	+,+,-	PRPF40B,PRPF40B,FAM186B	-9137,-2213,-27056
chr9:130523413-130523983	chr9	+	130523425	130523729	True	NM_001142532,NM_001142533,NM_001142531,NM_001142534,NR_036055,NM_005489	chr9,chr9,chr9,chr9,chr9,chr9	-,-,-,-,+,-	SH2D3C,SH2D3C,SH2D3C,SH2D3C,MIR2861,SH2D3C	1018,-5842,1040,-5864,24467,9942
chrX:133950441-133951126	chrX	+	133950644	133950934	True	NM_001170757,NM_001170781,NM_001170782,NM_001170783,NM_001170779,NM_138819,NM_001170784	chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,+,+	FAM122B,FAM122C,FAM122C,FAM122C,FAM122C,FAM122C,FAM122C	-19382,-9479,-9497,-9479,-9479,-9479,-9497
chr2:111118635-111118855	chr2	+	111118694	111118862	True	NR_037626,NR_027244	chr2,chr2	+,-	LOC100507334,LOC151009	-115530,23301
chr2:111118635-111118855	chr2	-	110767682	110767802	False	NR_037627,NR_036225	chr2,chr2	+,-	LOC100288570,MIR4267	-62466,59867
chr1:24716798-24717202	chr1	+	24716797	24716919	True	NM_020448,NM_001199013	chr1,chr1	+,-	NIPAL3,C1orf201	25325,23393
chr19:12202759-12202995	chr19	+	12202876	12202982	True	NM_001080404,NR_027049	chr19,chr19	-,+	ZNF878,ZNF788	-35749,95
chr7:64835467-64836871	chr7	+	64835708	64836831	True	NM_152626,NM_001007253,NM_007139	chr7,chr7,chr7	+,-,+	ZNF92,ERV3,ZNF92	1936,-368584,1936
chr19:36021361-36022399	chr19	+	36021595	36022249	True	NM_001166035,NM_001166034,NM_014364,NM_198538	chr19,chr19,chr19,chr19	-,-,+,-	SBSN,SBSN,GAPDHS,SBSN	-2342,-2342,2064,-2342
chrX:72297785-72298569	chrX	+	72297819	72298405	True	NM_001042506,NM_001012977	chrX,chrX	+,-	PABPC1L2B,PABPC1L2A	-74518,996
chrX:72297785-72298569	chrX	-	72224301	72224887	False	NR_026595,NM_001042506	chrX,chrX	-,+	NCRNA00246,PABPC1L2B	-60712,-1000
chr19:55012261-55012508	chr19	+	55012333	55012401	True	NM_145057,NM_021270,NM_002288	chr19,chr19,chr19	-,+,+	CDC42EP5,LAIR2,LAIR2	-27911,1611,1611
chr7:101927709-101928418	chr7	+	101927797	101928187	True	NR_036245,NM_020979,NM_001146210	chr7,chr7,chr7	+,+,-	MIR4285,SH2B2,SPDYE6	8181,217,68752
chr17:53801886-53802977	chr17	+	53801912	53802970	True	NM_021213,NM_018286,NM_001099640	chr17,chr17,chr17	+,-,-	PCTP,TMEM100,TMEM100	25369,-1687,6568
chr17:17742587-17743087	chr17	+	17742714	17743072	True	NM_001005291,NM_004176,NM_001130091	chr17,chr17,chr17	-,-,+	SREBF1,SREBF1,LRRC48	-2389,-2389,133054
chr1:93645431-93645671	chr1	+	93645530	93645710	True	NM_016040,NM_206886,NM_001167830,NR_030761	chr1,chr1,chr1,chr1	-,+,-,-	TMED5,CCDC18,TMED5,TMED5	586,570,586,586
chr12:31768150-31768786	chr12	+	31768196	31768834	True	NM_001135864,NM_144973	chr12,chr12	+,-	METTL20,DENND5B	31259,-24244
chr12:31768150-31768786	chr17	-	29673075	29673713	False	NM_014210,NM_032932	chr17,chr17	-,+	EVI2A,RAB11FIP4	-24308,44928
chr12:31768150-31768786	chr1	-	65691767	65692365	False	NR_029516,NM_014787	chr1,chr1	-,+	MIR101-1,DNAJC6	-167576,38064
chr13:50071060-50071582	chr13	+	50071160	50071514	True	NM_001079670,NM_001040444,NM_001040443	chr13,chr13,chr13	-,+,+	CAB39L,PHF11,PHF11	-52939,-683,-1410
chr8:94755903-94756190	chr8	+	94755930	94756228	True	NM_203390,NR_027259	chr8,chr8	-,+	RBM12B,C8orf39	-2706,-3651
chr16:20818943-20819270	chr16	+	20819132	20819318	True	NM_030941,NM_001142725,NM_080663,NM_001199053,NM_001144924	chr16,chr16,chr16,chr16,chr16	+,-,-,+,+	LOC81691,ERI2,ERI2,LOC81691,LOC81691	-1416,-1337,-1337,-1416,-1416
chr2:46844007-46844308	chr2	+	46844137	46844337	True	NM_173074,NM_002643,NM_014171	chr2,chr2,chr2	-,-,+	PIGF,PIGF,CRIPT	-30,-30,-7
chr2:237074930-237075518	chr2	+	237074963	237075555	True	NM_020311,NM_001485	chr2,chr2	+,-	CXCR7,GBX2	402824,1147
chr3:189508633-189509996	chr3	+	189508683	189510030	True	NM_018192,NM_001114980,NM_001114981,NM_001114982	chr3,chr3,chr3,chr3	-,+,+,+	LEPREL1,TP63,TP63,TP63	328929,-1285,-1285,-1285
chr3:43021874-43022625	chr3	+	43022066	43022672	True	NM_004391,NM_001129908	chr3,chr3	-,+	CYP8B1,FAM198A	-104433,-1358
chr13:48612259-48613858	chr13	+	48612362	48613650	True	NM_003850,NM_018283	chr13,chr13	-,+	SUCLA2,NUDT15	-36900,-710
chr15:53081560-53081839	chr15	+	53081585	53081667	True	NM_004498,NM_002748	chr15,chr15	-,+	ONECUT1,MAPK6	592,-770225
chr6:15251401-15252063	chr6	+	15251551	15251943	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	-5076,411402
chr13:19754928-19755350	chr13	+	19755114	19755198	True	NM_006001,NR_034026	chr13,chr13	-,+	TUBA3C,LOC100287114	854,163990
chr11:6625524-6627125	chr11	+	6625730	6627127	True	NM_015324,NM_001014794,NM_001014795,NM_004517,NM_006284	chr11,chr11,chr11,chr11,chr11	-,+,+,+,-	RRP8,ILK,ILK,ILK,TAF10	-919,-820,-577,-820,6368
chr17:71087140-71087505	chr17	+	71087233	71087296	True	NM_001159770,NM_139177,NM_001050	chr17,chr17,chr17	-,-,+	SLC39A11,SLC39A11,SSTR2	1610,1610,73863
chr16:1969795-1971018	chr16	+	1969899	1970919	True	NM_001009606,NM_004548	chr16,chr16	-,+	HS3ST6,NDUFB10	-1668,38597
chr12:10458252-10458481	chr12	+	10458251	10458465	True	NM_002262,NM_007334,NM_007360,NM_001114396	chr12,chr12,chr12,chr12	+,+,-,+	KLRD1,KLRD1,KLRK1,KLRD1	1951,1951,84250,-1252
chr3:39188952-39189697	chr3	+	39189024	39189598	True	NM_033027,NM_145755	chr3,chr3	-,+	CSRNP1,TTC21A	5556,-39923
chr19:39689055-39689791	chr19	+	39689055	39689765	True	NM_001080468,NM_001001414	chr19,chr19	-,+	SYCN,NCCRP1	5191,-1502
chr11:10772988-10773363	chr11	+	10773055	10773347	True	NM_014633,NR_004403	chr11,chr11	+,-	CTR9,SNORD97	-295,49858
chr22:31889841-31890425	chr22	+	31890143	31890275	True	NM_001164501,NM_014775,NM_001007467,NM_001164502,NM_019843	chr22,chr22,chr22,chr22,chr22	-,+,+,-,-	EIF4ENIF1,SFI1,SFI1,EIF4ENIF1,EIF4ENIF1	-4596,1985,1985,-4269,-4269
chr19:4832709-4833562	chr19	+	4832904	4833462	True	NM_182919,NM_018708	chr19,chr19	-,+	TICAM1,FEM1A	-1167,-41227
chr4:71554561-71554834	chr4	+	71554571	71554847	True	NM_144646,NM_020368	chr4,chr4	-,+	IGJ,UTP3	-22223,-426
chr4:139989466-139990316	chr4	+	139989534	139990372	True	NM_006874,NM_012118	chr4,chr4	-,+	ELF2,CCRN4L	15335,-52657
chr1:153319089-153319640	chr1	+	153319094	153319501	True	NM_020393,NM_002965	chr1,chr1	-,+	PGLYRP4,S100A9	1576,10828
chr14:97263072-97263575	chr14	+	97263181	97263495	True	NM_003384,NM_018036	chr14,chr14	+,-	VRK1,ATG2B	188,-433503
chr13:31311717-31313240	chr13	+	31311741	31313143	True	NM_001629,NM_002128	chr13,chr13	+,-	ALOX5AP,HMGB1	-2147,-271660
chr14:59263636-59264386	chr14	+	59263738	59264259	True	NM_012460,NM_016651	chr14,chr14	-,+	TIMM9,DACT1	-369506,-159032
chr3:47554288-47554571	chr3	+	47554292	47554454	True	NM_015466,NM_001031703	chr3,chr3	+,-	PTPN23,C3orf75	-131852,795
chr11:69592052-69592300	chr11	+	69592123	69592191	True	NM_002007,NM_053056	chr11,chr11	-,+	FGF4,CCND1	-1952,-136301
chr5:156534761-156535211	chr5	+	156534763	156535224	True	NM_005546,NM_032782	chr5,chr5	+,-	ITK,HAVCR2	72682,964
chr6:84588157-84589197	chr6	+	84588462	84589136	True	NR_026669,NM_016230	chr6,chr6	-,+	SNAP91,CYB5R4	-169335,-19152
chr1:33503158-33504580	chr1	+	33503465	33504380	True	NM_001625,NR_037592,NM_001199199,NM_013411,NR_037591,NM_052998	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,+	AK2,AK2,AK2,AK2,AK2,ADC	-953,-953,-953,-953,-953,42333
chr15:51642233-51643473	chr15	+	51642326	51643399	True	NM_181789,NM_031226	chr15,chr15	+,-	GLDN,CYP19A1	-8664,-11531
chr13:27997536-27998113	chr13	+	27997647	27998067	True	NM_002097,NM_001166262	chr13,chr13	+,-	GTF3A,MTIF3	613,26309
chr6:20405025-20405739	chr6	+	20405057	20405780	True	NM_001949,NM_001080480	chr6,chr6	+,-	E2F3,MBOAT1	-2983,-192387
chr13:37393874-37394195	chr13	+	37393955	37394239	True	NM_001127217,NM_000538	chr13,chr13	-,+	SMAD9,RFXAP	100220,-667
chr9:97402955-97403561	chr9	+	97403021	97403592	True	NM_000507,NM_001193331,NM_001127628	chr9,chr9,chr9	-,+,-	FBP1,C9orf3,FBP1	-1098,85358,-490
chrX:86773133-86773511	chrX	+	86773237	86773476	True	NM_019117,NM_001145414,NM_057162	chrX,chrX,chrX	+,-,+	KLHL4,CHM,KLHL4	-587,-1470671,-587
chr1:63831627-63832970	chr1	+	63831800	63832858	True	NM_014288,NM_013339	chr1,chr1	-,+	ITGB3BP,ALG6	156027,402
chr16:71264475-71264951	chr16	+	71264581	71264985	True	NM_017558,NM_001198542,NM_001198543,NM_001740,NM_032821	chr16,chr16,chr16,chr16,chr16	-,-,-,+,-	HYDIN,HYDIN,HYDIN,CALB2,HYDIN	11,-14,-14,127630,-12
chr22:42894781-42895906	chr22	+	42894951	42895955	True	NR_027786,NM_015703	chr22,chr22	+,-	SERHL,RRP7A	629,19928
chr19:2978322-2979040	chr19	+	2978375	2978889	True	NM_021217,NM_001143986,NM_024760	chr19,chr19,chr19	-,+,+	ZNF77,TLE6,TLE6	-33406,-890,-890
chr19:47424844-47425420	chr19	+	47424884	47425402	True	NM_021575,NM_004491	chr19,chr19	-,+	AP2S1,GRLF1	-70681,-3003
chr10:15139848-15140290	chr10	+	15139853	15140153	True	NM_183005,NM_001097590,NM_153244,NM_001039844,NM_006414	chr10,chr10,chr10,chr10,chr10	+,+,-,-,+	RPP38,RPP38,C10orf111,ACBD7,RPP38	-722,-722,-535,-9078,-722
chr10:102105222-102105465	chr10	+	102105359	102105477	True	NM_016112,NM_005063	chr10,chr10	-,+	PKD2L1,SCD	-15116,1294
chr9:116136129-116136532	chr9	+	116136145	116136451	True	NM_017688,NM_031219	chr9,chr9	+,-	BSPRY,HDHD3	-24384,1940
chr4:83540713-83541625	chr4	+	83540941	83541673	True	NR_024088,NM_021204,NR_024087	chr4,chr4,chr4	-,+,-	C4orf11,ENOPH1,C4orf11	967,-189266,967
chr4:99856250-99857026	chr4	+	99856539	99857065	True	NM_001130678,NM_001130679,NM_015143,NM_001968	chr4,chr4,chr4,chr4	-,-,+,-	EIF4E,EIF4E,METAP1,EIF4E	-6296,-4753,59722,-4753
chr20:46036576-46037654	chr20	+	46036695	46037545	True	NM_183048,NR_024594	chr20,chr20	-,+	ZMYND8,LOC100131496	-51221,-89501
chr6:83774233-83775018	chr6	+	83774339	83775051	True	NM_001199942,NM_015018,NM_198920	chr6,chr6,chr6	+,+,-	DOPEY1,DOPEY1,UBE2CBP	2333,2333,544
chr7:135347727-135348183	chr7	+	135347780	135348086	True	NM_001130929,NM_012450	chr7,chr7	+,-	PL-5283,SLC13A4	-610,64907
chr17:7082722-7083013	chr17	+	7082966	7083036	True	NM_001671,NM_000018,NM_001197216	chr17,chr17,chr17	-,+,-	ASGR1,ACADVL,ASGR1	-83,40116,-83
chr2:223590556-223590976	chr2	+	223590682	223590852	True	NM_058165,NM_005687	chr2,chr2	+,-	MOGAT1,FARSB	-54277,-69855
chr5:177629769-177630284	chr5	+	177629952	177630203	True	NR_003281,NM_031266,NM_004499	chr5,chr5,chr5	-,+,+	GMCL1L,HNRNPAB,HNRNPAB	-15519,1304,1304
chr14:103674853-103675484	chr14	+	103674856	103675402	True	NR_033938,NM_006291	chr14,chr14	-,+	LOC100131366,TNFAIP2	-19491,-82243
chr11:15781291-15782871	chr11	+	15781516	15782462	True	NM_001145819,NM_001042536	chr11,chr11	-,+	SOX6,INSC	642005,-645090
chr3:72889325-72890831	chr3	+	72889740	72890782	True	NM_001080393,NM_018130	chr3,chr3	+,-	GXYLT2,SHQ1	46602,6867
chr12:120874913-120875684	chr12	+	120875244	120875730	True	NM_016399,NM_004373,NM_176818,NR_033684	chr12,chr12,chr12,chr12	-,+,+,+	TRIAP1,COX6A1,GATC,GATC	8535,173,8510,8510
chr17:34339197-34340790	chr17	+	34339338	34340827	True	NM_002988,NM_005064,NM_145898	chr17,chr17,chr17	+,-,-	CCL18,CCL23,CCL23	50815,4228,4228
chr19:14315464-14315678	chr19	+	14315559	14315691	True	NM_014921,NR_024282,NM_001008701	chr19,chr19,chr19	-,+,-	LPHN1,LOC113230,LPHN1	1356,-131789,1356
chr2:85923260-85924651	chr2	+	85923363	85924326	True	NM_198843,NM_012483,NM_006433	chr2,chr2,chr2	-,+,+	SFTPB,GNLY,GNLY	-27499,-2000,-2000
chr17:5402296-5402881	chr17	+	5402352	5402907	True	NM_001162371,NM_024039	chr17,chr17	-,+	LOC728392,MIS12	1463,-12156
chr1:47899124-47899363	chr1	+	47899130	47899388	True	NR_026878,NM_004474	chr1,chr1	-,+	MGC12982,FOXD2	975,2300
chrX:153192564-153193300	chrX	+	153192595	153193333	True	NM_001164741,NM_003491,NM_001666,NM_001146151	chrX,chrX,chrX,chrX	-,-,-,+	ARHGAP4,NAA10,ARHGAP4,AVPR2	-881,7185,-881,-22117
chr12:51665300-51666298	chr12	+	51665304	51666049	True	NM_001136269,NM_001033873,NM_001031628	chr12,chr12,chr12	+,-,-	DAZAP2,SMAGP,SMAGP	-32847,-1310,-1102
chr1:207194234-207195517	chr1	+	207194289	207195327	True	NM_001083924,NM_006212	chr1,chr1	-,+	C1orf116,PFKFB2	10824,31292
chr8:67936235-67936800	chr8	+	67936394	67936561	True	NM_024790,NM_001013626	chr8,chr8	+,-	CSPP1,LRRC67	40041,4286
chr3:194358574-194360484	chr3	+	194358717	194360253	True	NM_001011655,NM_001166305,NM_153690,NM_138399,NM_001166306	chr3,chr3,chr3,chr3,chr3	-,-,+,-,-	TMEM44,TMEM44,FAM43A,TMEM44,TMEM44	-4567,-4567,46368,-4567,-4567
chr3:56834709-56835174	chr3	+	56834783	56835121	True	NM_019555,NR_024460	chr3,chr3	-,+	ARHGEF3,CCDC66	930,-243650
chr12:94542097-94542485	chr12	+	94542159	94542391	True	NM_001042399,NM_005761	chr12,chr12	-,+	CCDC41,PLXNC1	311423,107
chr9:136391005-136391629	chr9	+	136391007	136391552	True	NM_014694,NM_001080483,NM_001145320	chr9,chr9,chr9	+,-,+	ADAMTSL2,TMEM8C,ADAMTSL2	8422,-939,5733
chr2:220108787-220109065	chr2	+	220108950	220109115	True	NM_006000,NR_026909,NR_003063,NM_001008910,NM_024506	chr2,chr2,chr2,chr2,chr2	-,+,+,+,-	TUBA4A,STK16,TUBA4B,STK16,GLB1L	9580,1085,8849,1076,1073
chr11:2183209-2183636	chr11	+	2183288	2183446	True	NR_028044,NM_000207,NR_003512,NM_199293,NM_199292,NM_001185098,NM_001042376,NM_001185097,NM_000360	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,-,-,-,-,-,-,-,-	IGF2AS,INS,INS-IGF2,TH,TH,INS,INS-IGF2,INS,TH	-21581,-849,-849,9639,9639,-849,-849,-849,9639
chr17:80189928-80190134	chr17	+	80189990	80190122	True	NM_001042423,NM_001042422,NM_004207,NM_198082	chr17,chr17,chr17,chr17	+,+,+,-	SLC16A3,SLC16A3,SLC16A3,CCDC57	21,-3748,-3152,-19301
chr22:18591990-18592936	chr22	+	18592176	18592891	True	NM_001136004,NM_001193414,NM_018943	chr22,chr22,chr22	-,+,+	MICAL3,TUBA8,TUBA8	-84851,561,561
chr7:74654277-74655217	chr7	+	74654285	74654562	True	NR_002206,NM_001003795,NR_003580	chr7,chr7,chr7	-,+,-	GTF2IP1,GTF2IRD2B,LOC100093631	-840,-145989,-826
chr7:74654277-74655217	chr7	-	72567908	72568185	False	NR_002206,NR_003664,NR_003580	chr7,chr7,chr7	+,-,+	GTF2IP1,SPDYE8P,LOC100093631	840,-67599,826
chr7:74654277-74655217	chr7	+	74868472	74868749	False	NM_001145064,NR_003664	chr7,chr7	-,+	GATSL2,SPDYE8P	-1131,67783
chr7:74654277-74655217	chr7	-	74378318	74378595	False	NM_001025202,NM_001145063	chr7,chr7	-,+	STAG3L2,GATSL1	-71587,487
chr2:132230853-132231390	chr2	+	132230883	132231374	True	NM_001085365,NM_080386	chr2,chr2	-,+	MZT2A,TUBA3D	18741,2291
chr13:78492732-78493227	chr13	+	78492828	78493256	True	NM_001122659,NM_003991,NM_001201397,NM_144595	chr13,chr13,chr13,chr13	-,-,-,+	EDNRB,EDNRB,EDNRB,SLAIN1	74,74,697,-177584
chr5:10632698-10633335	chr5	+	10632811	10632878	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-68427,128560
chr13:20206951-20207594	chr13	+	20206968	20207406	True	NM_199254,NM_017520	chr13,chr13	-,+	TPTE2,MPHOSPH8	-96065,381
chr6:28185397-28185716	chr6	+	28185433	28185757	True	NR_002936,NM_001199479,NM_006299,NM_001199480	chr6,chr6,chr6,chr6	-,+,+,+	LOC222699,ZNF193,ZNF193,ZNF193	1000,7271,7271,7271
chrX:48381864-48382600	chrX	+	48381957	48382548	True	NM_006579,NM_033518	chrX,chrX	+,-	EBP,SLC38A5	-1848,-53313
chr1:228271398-228271727	chr1	+	228271460	228271768	True	NM_001024227,NM_001024226,NM_024319,NM_001024228,NM_001658	chr1,chr1,chr1,chr1,chr1	+,+,-,+,+	ARF1,ARF1,C1orf35,ARF1,ARF1	-660,-1150,19304,-660,-1150
chr7:138603169-138603513	chr7	+	138603179	138603527	True	NM_001164665,NM_001085429	chr7,chr7	-,+	KIAA1549,TMEM213	62587,-120491
chr4:72897908-72898210	chr4	+	72897968	72898076	True	NM_053036,NM_001204306,NM_004885,NM_001144756	chr4,chr4,chr4,chr4	+,-,+,+	NPFFR2,GC,NPFFR2,NPFFR2	6772,-226731,-498,6772
chr5:75703908-75704862	chr5	+	75704052	75704452	True	NM_006633,NM_004101	chr5,chr5	+,-	IQGAP2,F2RL2	-4955,214852
chrX:118893295-118893517	chrX	+	118893321	118893559	True	NM_001105576,NR_002584	chrX,chrX	+,-	ANKRD58,SNORA69	-796,27938
chr8:38011388-38012783	chr8	+	38011772	38012790	True	NM_001204878,NM_000349	chr8,chr8	+,-	BAG4,STAR	21315,-3172
chr2:71018002-71019774	chr2	+	71018234	71019541	True	NM_001004311,NM_012476	chr2,chr2	-,+	FIGLA,VAX2	-459,108178
chr18:70535620-70536073	chr18	+	70535841	70536122	True	NM_014177,NM_138999,NM_001201465,NM_138966	chr18,chr18,chr18,chr18	+,-,-,-	C18orf55,NETO1,NETO1,NETO1	1279623,-2907,-1031,-1031
chr5:140783902-140784940	chr5	+	140783917	140784931	True	NM_018925,NM_032090,NM_032100,NM_018921,NM_032099,NM_032089,NM_018926,NM_005642,NM_018913	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,+,-,+	PCDHGB5,PCDHGA10,PCDHGB6,PCDHGA9,PCDHGB5,PCDHGA9,PCDHGB6,TAF7,PCDHGA10	-6273,7811,2838,-1448,-6273,-1448,2838,-83566,7811
chr12:49366322-49367383	chr12	+	49366419	49367297	True	NM_003394,NM_005430	chr12,chr12	-,+	WNT10B,WNT1	-778,4938
chr9:34728062-34728992	chr9	+	34728098	34729003	True	NM_004512,NM_001141917	chr9,chr9	+,-	IL11RA,C9orf144B	-74230,583
chrY:2803817-2804042	chrY	+	2803918	2804090	True	NM_003411,NM_001145275,NM_001145276,NM_003140	chrY,chrY,chrY,chrY	+,+,+,-	ZFY,ZFY,ZFY,SRY	-451,-451,-857,-148126
chr12:21534652-21535583	chr12	+	21534873	21535344	True	NM_134431,NM_000415	chr12,chr12	-,+	SLCO1A2,IAPP	13086,-9132
chr16:85222195-85222657	chr16	+	85222438	85222702	True	NR_033984,NM_198491	chr16,chr16	+,-	LOC400548,FAM92B	-51740,-76324
chr17:7787959-7788289	chr17	+	7788226	7788292	True	NM_032356,NM_005852,NM_001005273,NM_001005271	chr17,chr17,chr17,chr17	-,+,+,+	LSMD1,CHD3,CHD3,CHD3	-27054,3876,3876,-154
chr3:50273045-50273276	chr3	+	50273056	50273242	True	NM_002070,NM_006764	chr3,chr3	+,-	GNAI2,IFRD2	404,56834
chr18:3450277-3450543	chr18	+	3450335	3450419	True	NM_019856,NM_173211,NM_173210,NM_003244,NM_170695,NM_173208,NM_173209,NM_173207	chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18	-,+,+,+,+,+,+,+	MYOM1,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1	-230229,3352,1171,-214,1171,-355,-413,-2778
chr17:52981448-52981851	chr17	+	52981755	52981902	True	NM_005486,NR_027941	chr17,chr17	+,-	TOM1L1,COX11	-3761,64217
chr5:43130220-43130757	chr5	+	43130383	43130636	True	NM_003432,NR_034127	chr5,chr5	+,-	ZNF131,LOC100132356	-8803,-63310
chrX:96135202-96136709	chrX	+	96135201	96136758	True	NR_003539,NM_013347	chrX,chrX	-,+	LOC643486,RPA4	-542300,2148
chr4:71583367-71583690	chr4	+	71583375	71583523	True	NM_144646,NM_014961,NM_001037442	chr4,chr4,chr4	-,+,+	IGJ,RUFY3,RUFY3	-51027,4172,4172
chr5:38257085-38257830	chr5	+	38257089	38257797	True	NM_152403,NM_001127671	chr5,chr5	+,-	EGFLAM,LIFR	735,299001
chr8:22012404-22014018	chr8	+	22012460	22013932	True	NM_139278,NM_001199,NM_001172357,NR_033403,NR_033404,NM_001172410,NM_006129,NM_003018	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,+,+,+,+,+,+,+	LGI3,BMP1,SFTPC,BMP1,BMP1,SFTPC,BMP1,SFTPC	462,8720,5251,8720,8720,5251,8720,5251
chr22:20851490-20852748	chr22	+	20851659	20852543	True	NM_001003891,NR_033825,NM_015889,NM_032775	chr22,chr22,chr22,chr22	+,-,+,-	MED15,KLHL22,MED15,KLHL22	9342,-1489,9342,-1489
chr7:64258476-64258889	chr7	+	64258604	64258880	True	NR_027661,NM_006524,NM_001160183,NR_027660,NR_002789	chr7,chr7,chr7,chr7,chr7	+,+,+,+,-	ZNF138,ZNF138,ZNF138,ZNF138,LOC168474	-3891,-3891,-3891,-3891,55354
chr16:14407946-14408417	chr16	+	14408021	14408416	True	NR_029854,NM_001134477	chr16,chr16	+,-	MIR365-1,PARN	-4933,315767
chr22:39378281-39378729	chr22	+	39378324	39378648	True	NM_014292,NM_004900	chr22,chr22	-,+	CBX6,APOBEC3B	-110066,2
chr1:223203334-223204378	chr1	+	223203511	223204379	True	NM_032890,NM_003268	chr1,chr1	+,-	DISP1,TLR5	-215135,112295
chr18:45566809-45567281	chr18	+	45566942	45567298	True	NM_001142397,NM_001039360	chr18,chr18	+,-	CTIF,ZBTB7C	498128,96432
chr7:27160565-27162245	chr7	+	27160643	27162187	True	NM_030661,NM_153631,NR_002795,NM_002141	chr7,chr7,chr7,chr7	-,-,+,-	HOXA3,HOXA3,HOXA11-AS1,HOXA4	-1429,4502,62839,8262
chr2:75185801-75186115	chr2	+	75185912	75186148	True	NM_019896,NM_001058	chr2,chr2	+,-	POLE4,TACR1	-188,240547
chr3:132316805-132318273	chr3	+	132317140	132317879	True	NM_032169,NM_016557,NM_178445	chr3,chr3,chr3	-,+,+	ACAD11,CCRL1,CCRL1	61147,-1112,1101
chr5:178207819-178208929	chr5	+	178207839	178208785	True	NR_024035,NM_058230	chr5,chr5	-,+	AACSP1,ZNF354B	-4562,78168
chr18:19191172-19191890	chr18	+	19191629	19191755	True	NM_006938,NM_052911	chr18,chr18	+,-	SNRPD1,ESCO1	504,-10936
chr1:217311051-217311529	chr1	+	217311146	217311542	True	NM_001134285,NM_138796	chr1,chr1	-,+	ESRRG,SPATA17	-49,493152
chr21:45681047-45681640	chr21	+	45681049	45681677	True	NM_000383,NM_175867,NM_013369	chr21,chr21,chr21	+,-,-	AIRE,DNMT3L,DNMT3L	24085,472,472
chr1:151511492-151512943	chr1	+	151511698	151512954	True	NM_001126337,NM_145796,NM_020127,NR_030280	chr1,chr1,chr1,chr1	+,-,+,+	TUFT1,POGZ,TUFT1,MIR554	-174,-79757,-174,5317
chrX:2849617-2850294	chrX	+	2849781	2850317	True	NM_009589,NM_001011719,NM_001669	chrX,chrX,chrX	-,+,-	ARSD,ARSH,ARSD	-2389,74336,-2389
chrX:101968885-101969248	chrX	+	101968912	101969222	True	NM_030639,NM_001184875,NM_001184874,NM_001184876,NM_001004051,NM_138437,NM_001142528,NM_021992,NM_001142525,NM_001142524,NM_001142527,NM_001142526	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,+,+,-,+,+,+,+	BHLHB9,GPRASP2,GPRASP2,GPRASP2,GPRASP2,GPRASP2,BHLHB9,TMSB15A,BHLHB9,BHLHB9,BHLHB9,BHLHB9	6419,-1859,-1859,-1859,-1859,-1859,6419,-197213,6419,6419,6419,6419
chr15:90807205-90808046	chr15	+	90807254	90808084	True	NM_001033088,NR_028052,NM_006384	chr15,chr15,chr15	+,+,-	NGRN,NGRN,CIB1	810,810,-29975
chr20:18038863-18039399	chr20	+	18039081	18039392	True	NM_021220,NM_001164811	chr20,chr20	-,+	OVOL2,PET117	-560,79106
chrX:100239261-100240758	chrX	+	100239455	100240711	True	NM_212559,NM_001162491	chrX,chrX	-,+	XKRX,ARL13A	-55557,-14820
chr7:2353351-2353560	chr7	+	2353405	2353549	True	NM_001037283,NM_013321	chr7,chr7	+,-	EIF3B,SNX8	40924,600
chr12:58178868-58179345	chr12	+	58179072	58179140	True	NM_023033,NM_001172697,NM_001172695,NM_001172696,NM_005726	chr12,chr12,chr12,chr12,chr12	-,+,+,+,+	METTL1,TSFM,TSFM,TSFM,TSFM	-13158,-2595,-2595,-2595,-2595
chr2:172777203-172777461	chr2	+	172777203	172777289	True	NR_027862,NM_003705,NM_003642	chr2,chr2,chr2	+,-,+	HAT1,SLC25A12,HAT1	1645,-26390,1645
chr10:92640204-92641738	chr10	+	92640586	92641773	True	NM_019860,NM_001104546,NM_006413	chr10,chr10,chr10	-,+,+	HTR7,RPP30,RPP30	-22915,-8928,-8928
chr4:113436495-113436715	chr4	+	113436592	113436762	True	NM_016648,NM_024019	chr4,chr4	+,-	LARP7,NEUROG2	121357,616
chr17:16342689-16343698	chr17	+	16342835	16343685	True	NR_027178,NR_027176,NR_027166,NR_027167,NR_027164,NR_027165,NR_003043,NR_027163,NR_027160,NR_027161,NR_027168,NR_027169,NR_027667,NR_027158,NR_027162,NR_003054,NR_027175,NR_027174,NR_027177,NR_002744,NR_027171,NR_027170,NR_027173,NR_027172,NR_027179,NR_027159,NM_001113567	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,-	NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,SNORD49B,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,SNORD65,NCRNA00188,NCRNA00188,NCRNA00188,SNORD49A,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,C17orf76	-586,-586,-586,-586,-586,-586,-64,-586,-586,-586,-586,-586,-586,-586,-586,854,-586,-586,-586,21,-586,-586,-586,-586,-586,-586,51852
chr1:206979528-206979948	chr1	+	206979552	206979968	True	NM_153758,NM_000572	chr1,chr1	+,-	IL19,IL10	-7388,-33713
chr1:1052929-1053449	chr1	+	1052932	1053476	True	NM_017891,NR_029639	chr1,chr1	-,+	C1orf159,MIR200B	-1196,49007
chr11:2921310-2921845	chr11	+	2921390	2921633	True	NM_183233,NM_007105,NM_002555	chr11,chr11,chr11	+,-,+	SLC22A18,SLC22A18AS,SLC22A18	-490,3599,1878
chr16:58004357-58005233	chr16	+	58004408	58005089	True	NM_001297,NM_199456,NM_199046,NM_001135639	chr16,chr16,chr16,chr16	-,+,+,-	CNGB1,TEPP,TEPP,CNGB1	-19,5249,5249,-19
chr17:79671614-79672195	chr17	+	79671644	79671956	True	NM_001040025,NM_002949,NM_012140	chr17,chr17,chr17	-,+,+	ARL16,MRPL12,SLC25A10	-20690,-1295,7414
chr1:110454308-110454868	chr1	+	110454375	110454752	True	NM_172210,NM_000757,NM_172212,NM_139053,NM_172211	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	CSF1,CSF1,CSF1,EPS8L3,CSF1	-1193,-1193,-1193,-147731,-1193
chr3:15632957-15634851	chr3	+	15633009	15633948	True	NM_000060,NM_012260	chr3,chr3	+,-	BTD,HACL1	9306,9233
chr9:124131801-124132056	chr9	+	124131856	124131944	True	NM_004099,NM_000177,NM_198194	chr9,chr9,chr9	-,+,-	STOM,GSN,STOM	651,-69829,651
chr7:93549324-93550511	chr7	+	93549474	93550417	True	NM_004126,NM_006528	chr7,chr7	+,-	GNG11,TFPI2	598,-29409
chr16:4744428-4744708	chr16	+	4744578	4744646	True	NM_001193452,NM_032349,NM_133450	chr16,chr16,chr16	+,+,-	NUDT16L1,NUDT16L1,ANKS3	-935,-935,39567
chr6:31085614-31087206	chr6_mcf_hap5	+	2468871	2468955	False	NM_014068,NM_001264,NM_014070	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	+,-,-	PSORS1C1,CDSN,C6orf15	-4392,1268,-6614
chr6:31085614-31087206	chr6_dbb_hap3	+	2384118	2384202	False	NM_014068,NM_001264,NM_014070	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	+,-,-	PSORS1C1,CDSN,C6orf15	-4392,1268,-6614
chr6:31085614-31087206	chr6_mann_hap4	+	2435303	2435387	False	NM_014068,NM_001264,NM_014070	chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4	+,-,-	PSORS1C1,CDSN,C6orf15	-4392,1268,-6625
chr6:31085614-31087206	chr6	+	31086949	31087033	True	NM_014068,NM_001264,NM_014070	chr6,chr6,chr6	+,-,-	PSORS1C1,CDSN,C6orf15	-4395,1269,-6617
chr17:1618104-1618592	chr17	+	1618230	1618554	True	NM_001163811,NR_028503,NR_028502,NR_028505,NR_028504,NM_001164407,NM_001163809,NM_001163673,NM_152348,NR_029494	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,-,-,-,+,+,+,-	WDR81,C17orf91,C17orf91,C17orf91,C17orf91,TLCD2,WDR81,WDR81,WDR81,MIR22	9279,1062,1062,1062,1062,-4568,9570,1262,1262,-949
chr20:20039694-20041424	chr20	+	20039814	20041430	True	NM_001167816,NM_015585,NM_016652	chr20,chr20,chr20	+,+,-	C20orf26,C20orf26,CRNKL1	-2575,-6707,-3124
chr15:72976987-72977720	chr15	+	72977429	72977747	True	NR_002780,NM_033028	chr15,chr15	-,+	HIGD2B,BBS4	793,778
chr12:113911786-113912072	chr12	+	113911786	113912116	True	NM_022363,NM_138432	chr12,chr12	-,+	LHX5,SDSL	-1909,-51621
chr14:99172587-99173475	chr14	+	99172593	99173318	True	NM_022898,NM_182560	chr14,chr14	-,+	BCL11B,C14orf177	564565,4631
chr4:68963969-68965004	chr4	+	68964051	68965023	True	NR_015446,NM_207407	chr4,chr4	+,-	FTLP10,TMPRSS11F	82986,30624
chr7:123673391-123673616	chr7	+	123673454	123673656	True	NM_001174046,NM_001136002	chr7,chr7	+,-	SPAM1,TMEM229A	-107596,-43
chr1:95006207-95006913	chr1	+	95006257	95006839	True	NM_001178096,NM_001993,NM_002858	chr1,chr1,chr1	-,-,+	F3,F3,ABCD3	624,624,-122375
chr16:75018977-75019214	chr16	+	75019098	75019260	True	NM_030581,NM_032268	chr16,chr16	-,+	WDR59,ZNRF1	-81,13654
chr16:67196154-67196460	chr16	+	67196244	67196490	True	NM_001040667,NM_001538,NM_003789,NM_018378,NM_001185058	chr16,chr16,chr16,chr16,chr16	+,+,-,+,+	HSF4,HSF4,TRADD,FBXL8,NOL3	797,797,-2432,-2412,7914
chr19:42131283-42131591	chr19	+	42131422	42131550	True	NM_033543,NM_001817	chr19,chr19	+,-	CEACAM21,CEACAM4	-48942,1942
chr15:50339762-50340851	chr15	+	50339812	50340523	True	NM_001159629,NM_024837	chr15,chr15	+,-	SLC27A2,ATP8B4	133869,70946
chr16:19428773-19429310	chr16	+	19428780	19429289	True	NM_001105249,NM_001105248,NM_016641	chr16,chr16,chr16	+,+,-	TMC5,TMC5,GDE1	-6783,-6783,104211
chr3:4503302-4503773	chr3	+	4503334	4503806	True	NM_001099952,NM_182760,NM_001164675,NM_001164674	chr3,chr3,chr3,chr3	+,-,-,-	ITPR1,SUMF1,SUMF1,SUMF1	31225,5210,5210,5210
chr8:12661489-12662033	chr8	+	12661544	12662076	True	NR_015383,NR_037495	chr8,chr8	-,+	LOC340357,MIR3926-2	6896,-76861
chr8:80994336-80995002	chr8	+	80994490	80995048	True	NM_001025252,NM_001105539	chr8,chr8	-,+	TPD52,ZBTB10	-1480,403399
chr17:7299026-7299892	chr17	+	7299338	7299686	True	NM_152766,NM_020360,NM_020795,NM_001201576,NR_037719	chr17,chr17,chr17,chr17,chr17	-,-,+,-,-	C17orf61,PLSCR3,NLGN2,PLSCR3,C17orf61-PLSCR3	7814,-1176,11815,-1176,7814
chr20:8113955-8114185	chr20	+	8114070	8114184	True	NM_015192,NM_182734,NM_021156	chr20,chr20,chr20	+,+,-	PLCB1,PLCB1,TMX4	-825,-825,-113677
chr7:73256802-73257095	chr7	+	73256805	73257075	True	NM_001305,NM_152559	chr7,chr7	+,-	CLDN4,WBSCR27	-11663,-34
chr10:95464866-95465545	chr10	+	95465133	95465578	True	NM_005097,NM_145246	chr10,chr10	+,-	LGI1,FRA10AC1	51987,-2804
chr17:46873836-46874296	chr17	+	46873990	46874342	True	NM_005831,NM_173623	chr17,chr17	+,-	CALCOCO2,TTLL6	34029,-2304
chr5:850948-851389	chr5	+	851069	851263	True	NM_001166260,NM_024786	chr5,chr5	+,-	TRIP13,ZDHHC11	41705,32
chr12:6883225-6883687	chr12	+	6883248	6883724	True	NM_002286,NR_026581,NM_002824	chr12,chr12,chr12	+,-,+	LAG3,MLF2,PTMS	-1629,-20612,-7758
chr14:94914519-94914751	chr14	+	94914524	94914720	True	NM_001080451,NM_006215	chr14,chr14	-,+	SERPINA11,SERPINA4	4452,113062
chr20:44454805-44455466	chr20	+	44454850	44455402	True	NM_003279,NM_033421,NM_001042632,NM_001042633,NM_152897	chr20,chr20,chr20,chr20,chr20	-,+,+,+,+	TNNC2,SNX21,SNX21,SNX21,SNX21	601,7067,7067,7067,7067
chr11:108401268-108402039	chr11	+	108401285	108402050	True	NM_153705,NM_004398	chr11,chr11	-,+	KDELC2,DDX10	-32126,133765
chr19:54495580-54496088	chr19	+	54495854	54496014	True	NM_145814,NM_145815,NM_198481,NM_031897	chr19,chr19,chr19,chr19	+,+,-,+	CACNG6,CACNG6,VSTM1,CACNG6	-363,-363,71243,-363
chr3:142724650-142725317	chr3	+	142724857	142725272	True	NM_001080415,NR_034032	chr3,chr3	+,-	U2SURP,LOC100289361	-4545,-4548
chr22:17074351-17075489	chr7	-	152141312	152141369	True	NR_002935,NM_170606	chr7,chr7	+,-	FABP5P3,MLL3	-7390,-8222
chr17:61563058-61564489	chr17	+	61563455	61564383	True	NM_152830,NM_001915,NM_000789,NM_001178057	chr17,chr17,chr17,chr17	+,-,+,+	ACE,CYB561,ACE,ACE	-1328,-39733,-9084,-1328
chr16:53497772-53498864	chr16	+	53497806	53498712	True	NM_001012398,NM_005611	chr16,chr16	-,+	AKTIP,RBL2	38519,-29516
chr15:21363035-21364139	chr15	+	21363227	21363818	True	NR_027411,NR_028506	chr15,chr15	+,-	GOLGA8C,NF1P1	-595616,-228602
chr15:21363035-21364139	chr15	+	20356630	20357221	False	NR_036432,NR_027411	chr15,chr15	-,+	HERC2P3,GOLGA8C	354269,410452
chr6:27340779-27341926	chr6	+	27340809	27341960	True	NM_001076781,NR_024553,NR_002722	chr6,chr6,chr6	+,-,-	ZNF391,ZNF204P,ZNF204P	14563,1243,-1505
chr3:184056867-184057407	chr3	+	184056870	184057176	True	NM_144635,NM_001171087,NM_001171093	chr3,chr3,chr3	+,-,+	FAM131A,CLCN2,FAM131A	-1645,22265,-3204
chr7:72636751-72637138	chr7	+	72636885	72637051	True	NR_002164,NR_003186	chr7,chr7	-,+	GTF2IRD2P1,NCF1B	48671,-2269
chr7:72636751-72637138	chr7	+	74190585	74190751	False	NM_173537,NM_000265	chr7,chr7	-,+	GTF2IRD2,NCF1	77154,-2334
chr7:72636751-72637138	chr7	-	74585377	74585543	False	NM_001003795,NR_003187	chr7,chr7	+,-	GTF2IRD2B,NCF1C	-77095,2330
chr16:31519882-31521153	chr16	+	31519943	31520669	True	NM_022744,NM_016633	chr16,chr16	-,+	C16orf58,AHSP	-237,18533
chr7:134246252-134246462	chr7	+	134246322	134246382	True	NM_001628,NM_001080538	chr7,chr7	-,+	AKR1B1,AKR1B15	-102434,-12527
chr3:101039880-101040696	chr3	+	101039904	101040740	True	NM_016247,NR_036433	chr3,chr3	-,+	IMPG2,FAM172B	-485,196975
chrX:153236295-153236573	chrX	+	153236365	153236611	True	NR_036174,NM_005334,NM_003492	chrX,chrX,chrX	+,-,+	MIR3202-1,HCFC1,TMEM187	9936,258,1379
chr2:178250106-178250951	chr2	+	178250310	178250585	True	NM_003659,NR_026966	chr2,chr2	+,-	AGPS,LOC100130691	6885,6886
chr5:43041618-43041838	chr5	+	43041652	43041868	True	NM_001014279,NR_015447	chr5,chr5	-,+	C5orf39,LOC153684	-1205,367
chr2:238769417-238770206	chr2	+	238769563	238770220	True	NM_005855,NR_033308	chr2,chr2	+,-	RAMP1,RAB17	-1434,-269794
chr7:28995115-28995364	chr7	+	28995166	28995400	True	NM_014817,NM_004067	chr7,chr7	-,+	TRIL,CHN2	2679,238720
chr2:173939753-173940423	chr2	+	173939767	173940334	True	NR_033882,NM_016653,NM_133646	chr2,chr2,chr2	-,+,+	LOC339751,ZAK,ZAK	206487,230,230
chr19:46172531-46173061	chr19	+	46172568	46172804	True	NM_000164,NR_037512,NR_030372	chr19,chr19,chr19	+,-,+	GIPR,MIR642B,MIR642A	-1117,5512,5381
chr20:8112374-8112596	chr20	+	8112380	8112626	True	NM_015192,NM_182734,NM_021156	chr20,chr20,chr20	+,+,-	PLCB1,PLCB1,TMX4	669,669,-111987
chr4:16084299-16084528	chr4	+	16084458	16084564	True	NM_001145849,NM_001145848,NM_001145847,NM_001145850,NM_001145851,NM_001145852,NM_006017,NR_027696	chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4	-,-,-,-,-,-,-,+	PROM1,PROM1,PROM1,PROM1,PROM1,PROM1,PROM1,FLJ39653	-6717,1109,1080,-6717,-6717,-6717,-6717,143721
chr11:33742882-33744821	chr11	+	33743082	33744763	True	NM_001127223,NM_001127227,NM_001127226,NM_001127225,NM_012194	chr11,chr11,chr11,chr11,chr11	-,-,-,-,+	CD59,CD59,CD59,CD59,C11orf41	21,-28,21,21,-179257
chr17:45725629-45725949	chr17	+	45725629	45725956	True	NM_002265,NR_033934	chr17,chr17	+,-	KPNB1,MRPL45P2	1318,-155643
chrX:107069089-107069462	chrX	+	107069298	107069500	True	NM_052817,NM_198057,NM_012216	chrX,chrX,chrX	+,-,+	MID2,TSC22D3,MID2	-265,-50281,-265
chr14:67671665-67672648	chr14	+	67671722	67672510	True	NM_173526,NM_015994	chr14,chr14	+,-	FAM71D,ATP6V1D	-15663,154260
chrX:57619271-57619489	chrX	+	57619303	57619529	True	NM_007156,NM_007157	chrX,chrX	-,+	ZXDA,ZXDB	317588,-1085
chrX:57619271-57619489	chrX	-	57935454	57935924	False	NM_007156,NM_007157	chrX,chrX	-,+	ZXDA,ZXDB	1613,-317656
chr12:86230123-86230621	chr12	+	86230137	86230660	True	NM_006183,NM_005447	chr12,chr12	+,-	NTS,RASSF9	37412,-24
chr9:139682410-139683362	chr9	+	139682446	139683239	True	NM_001039374,NM_032928,NR_024580	chr9,chr9,chr9	+,+,-	KIAA1984,TMEM141,LOC100131193	7550,2537,20112
chr7:150106001-150107346	chr7	+	150106185	150107313	True	NR_027237,NM_002889	chr7,chr7	+,-	LOC728743,RARRES2	-3396,-67422
chr16:123442-123914	chr16	+	123452	123934	True	NM_022450,NM_001015052,NM_002434,NM_001015054	chr16,chr16,chr16,chr16	-,+,+,+	RHBDF1,MPG,MPG,MPG	-823,4234,4234,3083
chr20:362530-363003	chr20	+	362584	362954	True	NM_021158,NM_144628	chr20,chr20	+,-	TRIB3,TBC1D20	-1327,80283
chr19:8952094-8952323	chr19	+	8952094	8952187	True	NM_145208,NM_144693	chr19,chr19	+,-	MBD3L1,ZNF558	1081,-18529
chr17:47306799-47307479	chr17	+	47306818	47307278	True	NM_001143804,NM_178500,NR_034161	chr17,chr17,chr17	-,-,+	PHOSPHO1,PHOSPHO1,FLJ40194	900,900,18326
chr22:39746845-39747457	chr22	+	39746861	39747461	True	NM_001033853,NM_145731,NM_004711	chr22,chr22,chr22	-,+,+	RPL3,SYNGR1,SYNGR1	-31191,-958,-958
chr9:93590477-93591091	chr9	+	93590608	93590994	True	NM_017594,NM_001174167	chr9,chr9	-,+	DIRAS2,SYK	-185500,-954
chrX:47091690-47092357	chrX	+	47091725	47092132	True	NR_024235,NM_001170460,NM_004651	chrX,chrX,chrX	-,+,+	NDUFB11,CDK16,USP11	-87116,-9360,181
chr19:53466231-53466432	chr19	+	53466382	53466460	True	NM_152473,NM_001202456,NM_001202473,NM_001031665,NM_001202457	chr19,chr19,chr19,chr19,chr19	+,-,-,-,-	HERV-V1,ZNF816,ZNF816-ZNF321,ZNF816,ZNF816	50883,-218,-218,-218,-218
chr2:47916137-47917835	chr2	+	47916140	47917511	True	NM_022055,NM_000179	chr2,chr2	-,+	KCNK12,MSH6	-118670,92709
chr11:118827701-118828953	chr11	+	118828010	118828665	True	NM_006760,NR_003040	chr11,chr11	+,-	UPK2,RPL23AP64	-1053,45689
chr7:99870247-99871576	chr7	+	99870322	99871125	True	NR_028040,NM_001004351,NR_028039,NR_028038,NM_178831	chr7,chr7,chr7,chr7,chr7	-,+,-,-,-	GATS,SPDYE3,GATS,GATS,GATS	-467,34199,-467,-467,-467
chr10:111681805-111682539	chr10	+	111681863	111682570	True	NM_020383,NM_019903,NR_030724,NM_001167604	chr10,chr10,chr10,chr10	-,+,-,-	XPNPEP1,ADD3,XPNPEP1,XPNPEP1	792,83155,792,792
chr6:90143296-90143614	chr6	+	90143302	90143432	True	NM_021244,NM_014942	chr6,chr6	-,+	RRAGD,ANKRD6	-21307,-456
chr22:40387241-40389139	chr22	+	40387278	40388818	True	NM_152512,NM_138435	chr22,chr22	-,+	ENTHD1,FAM83F	-97484,2134
chr5:96015197-96016678	chr5	+	96015197	96016678	True	NM_001042440,NM_016442	chr5,chr5	+,-	CAST,ERAP1	-17343,127264
chr9:123605451-123605844	chr9	+	123605477	123605767	True	NM_005047,NR_024408	chr9,chr9	-,+	PSMD5,LOC253039	-271,-208
chr2:65217204-65217633	chr2	+	65217269	65217493	True	NR_036586,NM_003038,NM_001193493	chr2,chr2,chr2	-,+,+	LOC400958,SLC1A4,SLC1A4	-57688,-825,-1741
chr14:56230425-56231313	chr14	+	56230521	56231339	True	NR_026796,NR_004844	chr14,chr14	-,+	C14orf34,RPL13AP3	32111,1623
chr9:137808959-137809687	chr9	+	137809000	137809541	True	NM_015837,NM_002003	chr9,chr9	+,-	FCN2,FCN1	-36399,322
chr6:74232619-74232869	chr6	+	74232648	74232870	True	NM_001402,NM_133645	chr6,chr6	-,+	EEF1A1,MTO1	-1893,-61250
chr10:121350076-121350841	chr10	+	121350329	121350414	True	NM_001033925,NM_004281,NM_003252	chr10,chr10,chr10	-,+,-	TIAL1,BAG3,TIAL1	6180,60467,6180
chr7:33088289-33089301	chr7	+	33088358	33089095	True	NM_016489,NM_001166118,NM_001033604	chr7,chr7,chr7	-,-,+	NT5C3,NT5C3,BBS9	-7836,-7837,80056
chr16:77823722-77824172	chr16	+	77823792	77824164	True	NM_020927,NM_199355	chr16,chr16	+,-	VAT1L,ADAMTS18	-1360,-354781
chr1:161101625-161102280	chr1	+	161101643	161102231	True	NM_001185094,NM_032998,NM_001039712,NM_001039711	chr1,chr1,chr1,chr1	+,-,-,-	NIT1,DEDD,DEDD,DEDD	-13786,297,75,297
chr16:90086114-90086388	chr16	+	90086120	90086432	True	NM_001042610,NM_001214,NR_023348,NM_024043	chr16,chr16,chr16,chr16	-,-,+,-	DBNDD1,C16orf3,GAS8,DBNDD1	-183,9927,2575,-9591
chr6:7540811-7541034	chr6	+	7540831	7541079	True	NM_004415,NM_001008844,NM_001170693	chr6,chr6,chr6	+,+,-	DSP,DSP,CAGE1	790,790,-150889
chr9:136398856-136399069	chr9	+	136399003	136399063	True	NM_014694,NM_001080483,NM_001145320	chr9,chr9,chr9	+,-,+	ADAMTSL2,TMEM8C,ADAMTSL2	911,-8935,-1768
chr18:12254393-12254782	chr18	+	12254438	12254788	True	NR_036468,NM_006796,NM_001279	chr18,chr18,chr18	+,-,+	CIDEA,AFG3L2,CIDEA	-129,122537,-171
chr3:10178905-10179845	chr3	+	10179129	10179681	True	NM_000551,NM_198156,NM_001164839	chr3,chr3,chr3	+,+,-	VHL,VHL,C3orf24	3637,3637,-29214
chr1:153955573-153956508	chr1	+	153955738	153956244	True	NM_002870,NM_006694,NM_001030	chr1,chr1,chr1	-,-,+	RAB13,JTB,RPS27	2614,-5287,6994
chr9:5885666-5886074	chr9	+	5885695	5886103	True	NM_024896,NM_005511	chr9,chr9	-,+	ERMP1,MLANA	-52614,4805
chrX:153719775-153720069	chrX	+	153719778	153720066	True	NM_014235,NM_017514,NM_001142392,NM_019848,NM_001142391	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	UBL4A,PLXNA3,SLC10A3,SLC10A3,SLC10A3	-4846,-33207,-776,-776,-776
chr7:127984408-127984714	chr7	+	127984435	127984626	True	NM_000230,NM_001166135,NM_018077	chr7,chr7,chr7	+,-,-	LEP,RBM28,RBM28	-103160,-473,-473
chr4:9500641-9500850	chr4	+	9500696	9500748	True	NR_031688,NM_001040448	chr4,chr4	-,+	MIR548I2,DEFB131	57239,-54487
chr11:62623463-62623863	chr11	+	62623489	62623805	True	NR_003098,NR_002559,NR_002561,NR_002563,NR_002562,NM_001012662,NR_002560,NM_001012664,NR_002565,NR_002564,NM_002394,NR_000008	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,-,+,-,+,-,-,+,-	SNHG1,SNORD29,SNORD30,SNORD27,SNORD28,SLC3A2,SNORD31,SLC3A2,SNORD25,SNORD26,SLC3A2,SNORD22	-129,-2049,-2285,-934,-1322,-56,-2624,-56,-386,-651,-56,-2982
chr17:37730312-37730668	chr17	+	37730374	37730674	True	NM_032192,NM_006160	chr17,chr17	+,-	PPP1R1B,NEUROD2	52504,33551
chr10:70231942-70232343	chr10	+	70231989	70232204	True	NM_030625,NM_001080449	chr10,chr10	+,-	TET1,DNA2	87912,-259
chr3:142315218-142315454	chr3	+	142315241	142315425	True	NM_001184,NM_001145319	chr3,chr3	-,+	ATR,PLS1	-17573,-63
chrX:100852795-100853939	chrX	+	100852891	100853751	True	NM_001009584,NM_016607	chrX,chrX	-,+	ARMCX6,ARMCX3	19290,24368
chrX:100852795-100853939	chrX	-	100870005	100870865	False	NM_019007,NM_001009584,NM_001184768,NR_033670,NM_016607,NM_177948,NM_177947,NR_033669	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,+,+,+,-	ARMCX6,ARMCX6,ARMCX6,ARMCX6,ARMCX3,ARMCX3,ARMCX3,ARMCX6	2176,2176,2176,2176,7254,7485,7254,2176
chr11:191912-192994	chr11	+	191916	193014	True	NM_053280,NM_001097610,NM_145651,NM_001098787	chr11,chr11,chr11,chr11	+,+,+,-	ODF3,LOC653486,SCGB1C1,BET1L	3746,65,65,14458
chr7:74380762-74381236	chr7	+	74380762	74381260	True	NM_001025202,NM_001145063	chr7,chr7	-,+	STAG3L2,GATSL1	-74031,-1730
chr7:74380762-74381236	chr7	+	72571004	72571502	False	NR_002206,NR_003664,NR_003580	chr7,chr7,chr7	+,-,+	GTF2IP1,SPDYE8P,LOC100093631	-2029,-70695,-2043
chr7:74380762-74381236	chr7	-	74650972	74651470	False	NR_002206,NM_001003795,NR_003580	chr7,chr7,chr7	-,+,-	GTF2IP1,GTF2IRD2B,LOC100093631	2025,-142676,2039
chr7:74380762-74381236	chr7	-	74865189	74865687	False	NM_001145064,NR_003664	chr7,chr7	-,+	GATSL2,SPDYE8P	1704,70845
chr12:101675378-101675774	chr12	+	101675413	101675823	True	NM_014503,NM_145913	chr12,chr12	+,-	UTP20,SLC5A8	-1567,-71397
chr15:78592809-78593556	chr15	+	78593136	78593398	True	NM_025234,NM_001130183	chr15,chr15	-,+	WDR61,DNAJA4	-1196,-34627
chr15:63480624-63481592	chr15	+	63480747	63481479	True	NM_016530,NM_015920	chr15,chr15	+,-	RAB8B,RPS27L	248,-31006
chr16:47175922-47176708	chr16	+	47175954	47176659	True	NM_001142466,NM_018092,NM_001201477	chr16,chr16,chr16	+,-,-	GPT2,NETO2,NETO2	-256903,1334,1334
chrX:68834203-68834604	chrX	+	68834239	68834491	True	NM_001002254,NM_001399,NM_001005609,NM_001005610,NM_001005613,NM_001005612	chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,+	AWAT2,EDA,EDA,EDA,EDA,EDA	435347,1419,1419,1419,1419,1419
chr19:16055634-16057026	chr19	+	16055994	16056926	True	NM_001004465,NM_021187	chr19,chr19	+,-	OR10H4,CYP4F11	2891,-10318
chr7:116378025-116379354	chr7	+	116378061	116379386	True	NR_002330,NM_001127500	chr7,chr7	-,+	ST7OT1,MET	215060,-65666
chr7:128371011-128371414	chr7	+	128371010	128371364	True	NM_001219,NM_001199674,NM_001199671,NM_001199673,NM_001199672,NM_001708,NM_001130674	chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,+,-,+	CALU,CALU,CALU,CALU,CALU,OPN1SW,CALU	7981,7981,7981,7981,7981,44530,7981
chr5:41171611-41172890	chr5	+	41171615	41172893	True	NM_000587,NM_000065	chr5,chr5	+,-	C7,C6	-262067,40824
chr19:532887-533285	chr19	+	532910	533160	True	NM_182577,NM_004359	chr19,chr19	-,+	ODF3L2,CDC34	-57927,-1228
chr19:46286841-46287110	chr19	+	46286912	46287103	True	NM_004943,NM_004409,NM_001081563,NM_001081562,NM_001081560,NM_004497	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,+	DMWD,DMPK,DMPK,DMPK,DMPK,FOXA3	9008,-1097,-3051,-1097,-1097,80414
chr7:100284952-100285400	chr7	+	100284974	100285242	True	NM_005273,NM_022574	chr7,chr7	+,-	GNB2,GIGYF1	-13662,1678
chr12:100378479-100378726	chr12	+	100378546	100378774	True	NM_152788,NR_031728	chr12,chr12	-,+	ANKS1B,MIR1827	-114,204887
chr1:54197863-54199482	chr1	+	54198196	54199362	True	NM_147193,NM_000792	chr1,chr1	-,+	GLIS1,DIO1	578,160498
chr11:93862704-93863071	chr11	+	93862712	93863098	True	NM_015368,NM_016540	chr11,chr11	+,-	PANX1,GPR83	-669,271537
chr6:28191271-28192977	chr6	+	28191368	28193003	True	NR_002936,NM_001199479,NM_001199480,NM_006299	chr6,chr6,chr6,chr6	-,+,+,+	LOC222699,ZNF193,ZNF193,ZNF193	-4661,25,25,25
chr9:4676096-4676975	chr9	+	4676380	4676766	True	NM_017913,NM_001039395	chr9,chr9	+,-	CDC37L1,C9orf68	2799,-9706
chr7:74345871-74346374	chr7	+	74345976	74346104	True	NM_001025202,NM_001145063	chr7,chr7	-,+	STAG3L2,GATSL1	-39245,32978
chr7:74345871-74346374	chr7	-	99885986	99886036	False	NM_001004351,NR_028038	chr7,chr7	+,-	SPDYE3,GATS	19288,-16131
chr7:74345871-74346374	chr7	+	72536482	72536610	False	NR_003664,NR_003580	chr7,chr7	-,+	SPDYE8P,LOC100093631	-36173,32401
chr7:74345871-74346374	chr7	-	74686025	74686153	False	NM_001003795,NR_003580	chr7,chr7	+,-	GTF2IRD2B,LOC100093631	-177729,-32566
chr7:74345871-74346374	chr7	-	74900282	74900410	False	NM_001145064,NR_003664	chr7,chr7	-,+	GATSL2,SPDYE8P	-32941,36122
chr17:19316035-19316448	chr17	+	19316143	19316447	True	NM_002404,NM_007148	chr17,chr17	-,+	MFAP4,RNF112	-25611,-1703
chr5:102591495-102593412	chr5	+	102591771	102593200	True	NM_033211,NM_017676	chr5,chr5	+,-	C5orf30,GIN1	1241,-135929
chr7:99719527-99719857	chr7	+	99719696	99719856	True	NM_139315,NM_152755,NM_001190415,NR_033792,NM_203397,NM_005641	chr7,chr7,chr7,chr7,chr7,chr7	-,+,-,-,+,-	TAF6,CNPY4,TAF6,TAF6,MBLAC1,TAF6	-2675,-2482,-2215,-2701,4463,-2701
chr2:233321224-233321766	chr2	+	233321422	233321790	True	NM_001631,NM_004826	chr2,chr2	+,-	ALPI,ECEL1	-640,30792
chr1:214725798-214726160	chr1	+	214725868	214726176	True	NM_016343,NM_005401	chr1,chr1	+,-	CENPF,PTPN14	50355,-844
chr12:65154842-65155676	chr12	+	65154864	65155725	True	NM_002076,NM_015279	chr12,chr12	-,+	GNS,TBC1D30	-1638,62626
chr15:25464902-25465596	chr15	+	25464973	25465382	True	NR_003315,NR_003358,NR_003495,NR_003496,NR_003497,NR_003314,NR_003346,NR_022010,NR_003344,NR_003345,NR_003351,NR_003347,NM_130838,NR_003342,NR_003343,NR_003303	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,+,+,+,-,+,+,+	SNORD115-23,SNORD115-43,SNORD115-24,HBII-52-27,HBII-52-28,SNORD115-22,SNORD115-31,PAR4,SNORD115-29,SNORD115-30,SNORD115-36,SNORD115-32,UBE3A,SNORD115-25,SNORD115-26,SNORD115-11	-8081,3010,-6218,267,2118,-9959,6873,-8185,3010,4967,3010,8731,185322,-4336,-1260,3010
chrX:67866957-67867167	chrX	+	67867013	67867075	True	NM_014725,NM_002547,NM_001142503	chrX,chrX,chrX	+,-,+	STARD8,OPHN1,STARD8	435,-213714,435
chr1:22351498-22351821	chr1	+	22351528	22351861	True	NR_023919,NR_023918,NM_005529	chr1,chr1,chr1	+,+,-	HSPC157,HSPC157,HSPG2	180,-8,-87778
chr19:786302-787211	chr19	+	786484	786611	True	NM_024888,NM_002819	chr19,chr19	-,+	LPPR3,PTBP1	35402,10780
chr20:39893053-39893933	chr20	+	39893254	39893722	True	NM_015035,NM_022896	chr20,chr20	-,+	ZHX3,LPIN3	35076,75837
chr4:122791496-122791767	chr4	+	122791619	122791801	True	NM_005033,NM_176824,NM_018190	chr4,chr4,chr4	+,-,-	EXOSC9,BBS7,BBS7	-69198,33,33
chr7:32535716-32536889	chr7	+	32535749	32536266	True	NM_012322,NM_001130710,NR_024466,NM_001139499,NM_015060	chr7,chr7,chr7,chr7,chr7	-,-,-,-,+	LSM5,LSM5,LSM5,LSM5,AVL9	-5726,-879,-5274,-879,-624
chr1:182026991-182027864	chr1	+	182027025	182027863	True	NR_034131,NM_001009992	chr1,chr1	+,-	NCRNA00272,ZNF648	348892,3034
chr1:91966141-91966693	chr1	+	91966248	91966598	True	NM_003503,NM_001134419,NM_001017975,NM_001134420	chr1,chr1,chr1,chr1	+,+,-,+	CDC7,CDC7,HFM1,CDC7	105,105,-95822,66
chr6:138824555-138825227	chr6	+	138824690	138824932	True	NM_001144060,NM_014320	chr6,chr6	-,+	NHSL1,HEBP2	-4111,-99405
chr20:43439774-43441532	chr20	+	43439817	43441499	True	NM_182970,NM_022358	chr20,chr20	-,+	RIMS4,KCNK15	-905,-65381
chr2:124782296-124782657	chr2	+	124782358	124782600	True	NM_032390,NM_130773	chr2,chr2	-,+	MKI67IP,CNTNAP5	-2287855,263
chr1:151137674-151137894	chr1	+	151137770	151137942	True	NM_024575,NM_001204848,NR_037937,NM_001204856,NM_001136543,NM_024041,NM_212551	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,-,+,-	TNFAIP8L2,TNFAIP8L2-SCNM1,SCNM1,SCNM1,LYSMD1,SCNM1,LYSMD1	-8716,-8716,555,555,532,555,478
chr12:758303-759719	chr12	+	758501	759513	True	NM_001184985,NM_016533	chr12,chr12	+,-	WNK1,NINJ2	102575,13292
chr22:20070445-20071779	chr22	+	20070766	20071826	True	NR_037412,NM_001190326,NM_022727,NM_022720,NR_031706	chr22,chr22,chr22,chr22,chr22	+,+,-,+,+	MIR3618,DGCR8,TRMT2A,DGCR8,MIR1306	1442,-3062,32992,-3062,1754
chr17:79282838-79283104	chr17	+	79282841	79283063	True	NM_178519,NR_038080,NM_001086521	chr17,chr17,chr17	-,-,+	C17orf55,C17orf55,C17orf89	35,35,-69782
chrX:130412064-130412409	chrX	+	130412131	130412237	True	NM_144967,NM_001170963	chrX,chrX	+,-	ARHGAP36,IGSF1	-219966,10848
chr17:64223159-64224218	chr17	+	64223399	64224245	True	NM_002737,NM_000042	chr17,chr17	+,-	PRKCA,APOH	74680,1361
chr10:43868026-43869835	chr10	+	43868073	43869430	True	NM_001184963,NM_001098208,NM_173160	chr10,chr10,chr10	+,-,+	FXYD4,HNRNPF,FXYD4	-1041,22906,-1041
chrX:97852365-97853971	chrX	+	97853149	97854005	True	NR_024608,NM_013347	chrX,chrX	-,+	LOC442459,RPA4	1340886,-1714299
chr7:73244772-73245101	chr7	+	73244798	73244942	True	NM_001305,NM_152559	chr7,chr7	+,-	CLDN4,WBSCR27	250,11963
chr19:49403888-49404251	chr19	+	49403986	49404300	True	NM_003323,NM_006184	chr19,chr19	-,+	TULP2,NUCB1	-1990,-730
chr1:19603462-19604736	chr1	+	19603892	19604748	True	NM_001145289,NM_201252,NM_016183	chr1,chr1,chr1	-,-,+	AKR7L,AKR7L,MRTO4	-3324,-3324,-25880
chr12:111019140-111019928	chr12	+	111019226	111019966	True	NM_139283,NM_001082537	chr12,chr12	-,+	PPTC7,TCTN1	1148,31865
chr3:157185520-157186286	chr3	+	157185527	157186087	True	NM_002852,NM_001167917	chr3,chr3	+,-	PTX3,VEPH1	-30998,27258
chr15:86704635-86705513	chr15	+	86704723	86705535	True	NM_022480,NM_152336	chr15,chr15	-,+	KLHL25,AGBL1	-366534,-19532
chr3:53918758-53919556	chr3	+	53919030	53919585	True	NM_022899,NM_018725,NM_021237	chr3,chr3,chr3	-,+,-	ACTR8,IL17RB,SELK	-2801,-38515,6454
chr21:37756932-37757346	chr21	+	37757013	37757284	True	NM_012130,NM_005441	chr21,chr21	-,+	CLDN14,CHAF1B	81500,404
chr5:175790575-175790991	chr5	+	175790716	175790808	True	NM_173664,NM_001079685,NM_001079684,NM_020444	chr5,chr5,chr5,chr5	+,-,-,-	ARL10,KIAA1191,KIAA1191,KIAA1191	1693,-1907,-1907,-1907
chr3:137834773-137835181	chr3	+	137834939	137835211	True	NM_014154,NM_173543,NM_001170538	chr3,chr3,chr3	+,-,-	ARMC8,DZIP1L,DZIP1L	70936,-488,-2617
chr1:185102488-185104267	chr1	+	185102527	185104191	True	NM_030934,NM_001105518	chr1,chr1	-,+	TRMT1L,SWT1	21982,22000
chr12:8017227-8017493	chr12	+	8017227	8017540	True	NM_153449,NM_024865	chr12,chr12	-,+	SLC2A14,NANOG	8006,-75285
chr12:2943897-2944207	chr12	+	2944138	2944220	True	NM_018463,NM_031474	chr12,chr12	+,-	ITFG2,NRIP2	-22402,51
chr6:146920613-146921293	chr6	+	146920691	146921310	True	NM_024694,NR_003954	chr6,chr6	+,-	C6orf103,LOC729176	-607,203701
chr1:47333551-47335010	chr1	+	47333685	47334161	True	NM_001099772,NR_002788	chr1,chr1	+,-	CYP4B1,CYP4Z2P	-69066,32044
chr1:240253180-240253724	chr1	+	240253310	240253769	True	NM_022469,NM_020066	chr1,chr1	-,+	GREM2,FMN2	521750,1415
chr19:1409230-1409488	chr19	+	1409293	1409519	True	NM_138924,NM_018959,NM_170711,NM_000156	chr19,chr19,chr19,chr19	-,+,+,-	GAMT,DAZAP1,DAZAP1,GAMT	-7741,-1760,-1760,-7741
chr3:48414212-48414974	chr3	+	48414253	48414839	True	NM_001159929,NM_207102,NM_001080525,NM_001159927	chr3,chr3,chr3,chr3	+,+,-,+	FBXW12,FBXW12,SPINK8,FBXW12	-597,-597,-44422,-597
chr2:150428216-150428775	chr2	+	150428395	150428749	True	NM_015702,NM_194317	chr2,chr2	-,+	MMADHC,LYPD6	15639,-241430
chr1:169264268-169265791	chr1	+	169264590	169265802	True	NM_003666,NM_013330	chr1,chr1	+,-	BLZF1,NME7	71391,71440
chr6:161691973-161693331	chr6	+	161692004	161693366	True	NM_006724,NM_020133	chr6,chr6	+,-	MAP3K4,AGPAT4	-279239,1791
chr1:27018817-27019471	chr1	+	27018828	27019482	True	NM_018066,NM_139135,NM_006015	chr1,chr1,chr1	-,+,+	GPN2,ARID1A,ARID1A	197437,3039,3039
chr17:42082777-42083109	chr17	+	42082885	42083103	True	NM_004160,NM_032376,NM_153006	chr17,chr17,chr17	-,-,+	PYY,TMEM101,NAGS	-1048,9292,-904
chrX:152689690-152691390	chrX	+	152689834	152691344	True	NM_001136273,NM_080701	chrX,chrX	+,-	ZFP92,TREX2	-6104,20651
chr20:34198730-34199408	chr20	+	34199097	34199323	True	NR_024377,NM_003116	chr20,chr20	-,+	FER1L4,SPAG4	-3613,4485
chr8:679189-680751	chr8	+	679478	680592	True	NM_207332,NM_183421	chr8,chr8	-,+	ERICH1,FBXO25	686,-322722
chr17:39197461-39197719	chr17	+	39197651	39197767	True	NM_033061,NM_001123387,NM_030967,NM_030966	chr17,chr17,chr17,chr17	+,-,-,-	KRTAP4-7,KRTAP2-1,KRTAP1-1,KRTAP1-3	42691,5851,4,-6544
chr6:94127098-94127623	chr6	+	94127186	94127582	True	NR_015362,NM_004440	chr6,chr6	+,-	TSG1,EPHA7	289218,1768
chr4:83824533-83825307	chr4	+	83824662	83825133	True	NM_024672,NR_034075,NR_034076,NR_034077	chr4,chr4,chr4,chr4	+,-,-,-	THAP9,LOC100499177,LOC100499177,LOC100499177	-2880,-2593,-2593,-2593
chr19:1283584-1284044	chr19	+	1283704	1284030	True	NR_027271,NM_001405,NM_017914	chr19,chr19,chr19	-,+,+	C19orf23,EFNA2,C19orf24	-13445,2137,-8235
chr8:11724438-11724741	chr8	+	11724446	11724676	True	NM_001908,NM_147782,NM_147783,NM_147780,NM_147781,NM_004462	chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,-,+	CTSB,CTSB,CTSB,CTSB,CTSB,FDFT1	1020,1020,1020,1020,1020,-64307
chr19:55629332-55630228	chr19	+	55629779	55630173	True	NM_017607,NM_017729	chr19,chr19	-,+	PPP1R12C,EPS8L1	-852,-38070
chr11:63741660-63742076	chr11	+	63741809	63742055	True	NM_004074,NM_173587	chr11,chr11	+,-	COX8A,RCOR2	23,-57493
chr7:1096736-1096937	chr7	+	1096739	1096859	True	NM_138445,NR_029898	chr7,chr7	+,-	GPR146,MIR339	281,-34077
chr1:151585186-151585522	chr1	+	151585330	151585536	True	NM_030918,NM_001172648	chr1,chr1	+,-	SNX27,CELF3	-719,103306
chr4:73011998-73012883	chr4	+	73011997	73012905	True	NM_053036,NM_001204306	chr4,chr4	+,-	NPFFR2,GC	-107207,-340760
chr7:65295586-65296899	chr7	+	65295666	65296628	True	NM_000181,NM_173517	chr7,chr7	-,+	GUSB,VKORC1L1	150733,41628
chr1:153523780-153524340	chr1	+	153523938	153524338	True	NM_002962,NM_002960,NM_019554,NM_002961,NM_006271	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	S100A5,S100A3,S100A4,S100A4,S100A1	-9697,-2204,-5656,-5656,76534
chr1:856691-857394	chr1	+	856729	857145	True	NM_152486,NR_026874	chr1,chr1	+,-	SAMD11,FLJ39609	3975,-1912
chr1:31883321-31883534	chr1	+	31883353	31883541	True	NM_001199039,NM_001199038,NM_018565,NM_001199037,NM_178865,NM_004102	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-	SERINC2,SERINC2,SERINC2,SERINC2,SERINC2,FABP3	3118,-993,3118,-384,2421,-37430
chr12:121353615-121354513	chr12	+	121353945	121354535	True	NM_139015,NM_000545	chr12,chr12	-,+	SPPL3,HNF1A	-11794,62013
chr22:27013244-27014557	chr22	+	27013308	27014503	True	NM_001886,NM_001887	chr22,chr22	+,-	CRYBA4,CRYBB1	3424,-21
chr11:65148317-65149281	chr11	+	65148360	65149327	True	NM_031904,NM_182556,NM_001077241	chr11,chr11,chr11	+,-,-	FRMD8,SLC25A45,SLC25A45	4713,865,865
chr5:172568651-172570018	chr5	+	172568776	172569612	True	NM_001166175,NM_001205,NM_013980,NM_013979,NM_013978	chr5,chr5,chr5,chr5,chr5	-,+,+,+,+	NKX2-5,BNIP1,BNIP1,BNIP1,BNIP1	92753,1832,1832,1832,1832
chr7:8475564-8476126	chr7	+	8475713	8476083	True	NM_004968,NM_152745	chr7,chr7	-,+	ICA1,NXPH1	-173528,-2179
chr19:4901548-4902667	chr19	+	4901684	4902636	True	NM_001080523,NM_001048201,NM_013282	chr19,chr19,chr19	-,+,+	ARRDC5,UHRF1,UHRF1	293,6873,7929
chr17:27667784-27669402	chr17	+	27667843	27669037	True	NM_020791,NM_020772	chr17,chr17	+,-	TAOK1,NUFIP2	48905,-46677
chr11:124623835-124624144	chr11	+	124623840	124624136	True	NM_138961,NM_006176,NM_014312	chr11,chr11,chr11	-,+,-	ESAM,NRGN,VSIG2	8137,-14063,-1731
chr1:6528473-6528953	chr1	+	6528509	6528941	True	NM_148967,NM_001039664,NM_003790,NM_031475,NM_148970,NM_148966,NM_148965	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,-,-	TNFRSF25,TNFRSF25,TNFRSF25,ESPN,TNFRSF25,TNFRSF25,TNFRSF25	-2254,-2254,-2254,-43712,-2254,-2254,-2254
chr5:74806831-74807057	chr5	+	74806983	74807063	True	NM_005713,NM_031361,NM_016218,NM_001130105	chr5,chr5,chr5,chr5	-,-,+,-	COL4A3BP,COL4A3BP,POLK,COL4A3BP	441,441,593,793
chr12:71854453-71855727	chr12	+	71854557	71855765	True	NM_003667,NM_144982	chr12,chr12	+,-	LGR5,ZFC3H1	-20795,202034
chr15:44092316-44092747	chr15	+	44092346	44092684	True	NM_016400,NM_001033517,NM_001199885,NR_037673,NR_037672,NM_001199878,NM_001199876,NR_031695,NM_001199875,NM_001018108	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,-,+,+,+,+,+,-,+,+	C15orf63,SERINC4,C15orf63,SERF2-C15ORF63,SERF2,SERF2,SERF2,MIR1282,SERF2,SERF2	-66,-91,-66,-8223,-8223,-7822,-8223,-6389,-8223,-8357
chr9:44991034-44991240	chr9	+	44991057	44991199	True	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-872,-1360327
chr9:44991034-44991240	chr9	+	45727848	45727990	False	NM_001145196,NR_024060	chr9,chr9	-,+	FAM75A6,FAM27A	-2097118,-870
chr9:44991034-44991240	chr9	-	67793221	67793363	False	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	876,133397
chr1:18958959-18959239	chr1	+	18958974	18959194	True	NM_001135254,NM_002584,NM_152232,NM_013945	chr1,chr1,chr1,chr1	+,+,-,+	PAX7,PAX7,TAS1R2,PAX7	-1525,-1525,227011,-1525
chr2:122287410-122287737	chr2	+	122287413	122287560	True	NR_023343,NM_001142273	chr2,chr2	+,-	RNU4ATAC,CLASP1	895,119543
chr8:31496086-31496658	chr8	+	31496178	31496640	True	NM_013962,NM_001015508	chr8,chr8	+,-	NRG1,PURG	627,-604947
chr19:9932012-9932222	chr19	+	9932135	9932197	True	NM_001048241,NM_024292,NM_017703	chr19,chr19,chr19	+,+,-	UBL5,UBL5,FBXL12	6370,6370,-2404
chr20:62153433-62154079	chr20	+	62153454	62154092	True	NM_024299,NM_005975	chr20,chr20	+,-	PPDPF,PTK6	-1372,14665
chr10:45473596-45473880	chr10	+	45473612	45473816	True	NM_007021,NM_032023	chr10,chr10	-,+	C10orf10,RASSF4	564,-18444
chr3:52188950-52189175	chr3	+	52189009	52189137	True	NM_015426,NM_199166,NM_001161580,NM_001161581	chr3,chr3,chr3,chr3	-,+,-,-	POC1A,ALAS1,POC1A,POC1A	-303,42978,-303,-303
chr5:131635281-131636723	chr5	+	131635645	131636519	True	NM_003059,NR_037500	chr5,chr5	+,-	SLC22A4,MIR3936	-5556,64822
chr2:73339124-73339387	chr2	+	73339186	73339380	True	NM_015470,NM_001134462	chr2,chr2	-,+	RAB11FIP5,NOTO	816,90005
chr22:29731909-29732716	chr22	+	29732045	29732477	True	NR_037426,NR_003686,NM_152237	chr22,chr22,chr22	-,-,+	MIR3653,SNORD125,GAS2L1	-2789,-2798,-29100
chr3:185659324-185660249	chr3	+	185659622	185660009	True	NM_004593,NR_033752	chr3,chr3	-,+	TRA2B,LOC344887	-3698,26257
chr6:88876001-88876330	chr6	+	88876072	88876138	True	NM_001160259,NM_001160258,NM_001160226,NM_030960,NM_016083	chr6,chr6,chr6,chr6,chr6	-,-,-,+,-	CNR1,CNR1,CNR1,SPACA1,CNR1	-305,-305,-305,-118616,-305
chr5:150661098-150661994	chr5	+	150661427	150661597	True	NM_001167607,NM_001145017	chr5,chr5	+,-	GM2A,SLC36A3	-28872,21797
chr8:145491065-145491306	chr8	+	145491096	145491178	True	NM_001008271,NM_015201,NM_001080514	chr8,chr8,chr8	+,-,+	SCXA,BOP1,SCXB	-544,23992,-544
chr8:145491065-145491306	chr8	+	145322010	145322092	False	NM_030974,NM_001008271,NM_001080514	chr8,chr8,chr8	-,+,+	SHARPIN,SCXA,SCXB	-162870,-544,-544
chr10:120402218-120403079	chr10	+	120402301	120403045	True	NM_004248,NM_199461	chr10,chr10	-,+	PRLHR,NANOS1	-47141,386182
chr19:5976677-5977500	chr19	+	5976930	5977288	True	NM_080590,NM_007322,NM_003624,NM_007320	chr19,chr19,chr19,chr19	+,-,-,-	CAPS,RANBP3,RANBP3,RANBP3	-62788,1082,1082,1082
chr3:196262939-196263333	chr3	+	196262941	196263137	True	NM_001105573,NM_001077657	chr3,chr3	+,-	FBXO45,C3orf43	32587,-20704
chr12:58141616-58142312	chr12	+	58141881	58142361	True	NM_005981,NM_001122772,NM_014770,NM_138396,NM_000075	chr12,chr12,chr12,chr12,chr12	+,-,-,+,-	TSPAN31,AGAP2,AGAP2,MARCH9,CDK4	-3148,-9852,-5941,6538,3853
chr1:173734564-173735639	chr1	+	173734652	173735438	True	NM_014458,NM_001171182	chr1,chr1	+,-	KLHL20,CENPL	-50632,57882
chr12:57430135-57430433	chr12	+	57430134	57430388	True	NM_007264,NM_005379	chr12,chr12	+,-	GPR182,MYO1A	-41833,13555
chr7:23285988-23286854	chr7	+	23286244	23286834	True	NM_006547,NM_001005340,NM_002510	chr7,chr7,chr7	-,+,+	IGF2BP3,GPNMB,GPNMB	223211,-13,-13
chr17:37719911-37720191	chr17	+	37719958	37720230	True	NM_032192,NM_006160	chr17,chr17	+,-	PPP1R1B,NEUROD2	62948,43995
chr7:87612165-87613598	chr7	+	87612342	87613569	True	NM_021723,NM_018843	chr7,chr7	+,-	ADAM22,SLC25A40	-48837,-106650
chr7:55987289-55987730	chr7	+	55987429	55987676	True	NM_182633,NM_207366	chr7,chr7	+,-	ZNF713,SEPT14	-7162,-56947
chr3:50240922-50241538	chr3	+	50240937	50241477	True	NM_006764,NM_006841	chr3,chr3	-,+	IFRD2,SLC38A3	88599,1214
chr12:122655032-122655561	chr12	+	122655246	122655616	True	NM_152759,NM_001014336	chr12,chr12	+,-	LRRC43,IL31	-3031,3188
chr3:88199472-88199851	chr3	+	88199492	88199869	True	NM_173824,NM_001195308	chr3,chr3	+,-	C3orf38,CGGBP1	-650,-476
chr16:57728695-57728954	chr16	+	57728699	57728939	True	NM_001130099,NM_032269	chr16,chr16	-,+	KIFC3,CCDC135	103040,-37
chr13:48671692-48672292	chr13	+	48671747	48672029	True	NM_018283,NM_014166	chr13,chr13	+,-	NUDT15,MED4	-60095,-2507
chr3:75481904-75482257	chr3	+	75482158	75482250	True	NR_031714,NR_024241	chr3,chr3	+,-	MIR1324,FAM86DP	197663,2066
chr11:134201075-134201599	chr11	+	134201078	134201539	True	NM_138342,NM_199298	chr11,chr11	+,-	GLB1L2,THYN1	228,-77818
chr5:149828082-149828953	chr5	+	149828148	149828916	True	NM_001025071,NM_001025070,NM_005617,NM_001543	chr5,chr5,chr5,chr5	-,-,-,+	RPS14,RPS14,RPS14,NDST1	453,453,453,58757
chr1:89663890-89664243	chr1	+	89663906	89664288	True	NM_052941,NM_198460	chr1,chr1	-,+	GBP4,GBP6	395,165147
chr14:38677153-38677825	chr14	+	38677270	38677818	True	NM_001049,NM_175060	chr14,chr14	+,-	SSTR1,CLEC14A	-117,47806
chr5:148407686-148407943	chr5	+	148407733	148407961	True	NM_024577,NM_014945	chr5,chr5	-,+	SH3TC2,ABLIM3	34826,113092
chr11:67774315-67775054	chr11	+	67774367	67775103	True	NM_030930,NM_001030010,NM_000694,NM_001161473	chr11,chr11,chr11,chr11	-,+,+,+	UNC93B1,ALDH3B1,ALDH3B1,ALDH3B1	-2774,2686,2686,944
chr7:100473182-100473688	chr7	+	100473216	100473591	True	NM_001015072,NM_003302,NM_001128853,NM_001128852,NM_015908,NM_001128854	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,+,+	UFSP1,TRIP6,SRRT,SRRT,SRRT,SRRT	13811,-8317,-566,-566,-566,-566
chr1:114424986-114425824	chr1	+	114425476	114425788	True	NM_001010922,NM_022836	chr1,chr1	-,+	BCL2L15,DCLRE1B	4431,22126
chr22:39095833-39096074	chr22	+	39095864	39096119	True	NM_014876,NM_004286	chr22,chr22	-,+	JOSD1,GTPBP1	391,5687
chr8:66632900-66633730	chr8	+	66633002	66633706	True	NM_002603,NM_001145838	chr8,chr8	-,+	PDE7A,MTFR1	67665,-50945
chr20:46012418-46012995	chr20	+	46012470	46012956	True	NM_183048,NR_024594	chr20,chr20	-,+	ZMYND8,LOC100131496	-26996,-65276
chr4:111559581-111560327	chr4	+	111559591	111560357	True	NM_153426,NM_153427,NM_001977,NM_001204399,NM_001204398,NM_001204397	chr4,chr4,chr4,chr4,chr4,chr4	-,-,+,-,-,-	PITX2,PITX2,ENPEP,PITX2,PITX2,PITX2	2972,2972,-162413,2972,2972,2972
chr8:99294393-99294783	chr8	+	99294495	99294759	True	NM_024759,NM_020697	chr8,chr8	-,+	NIPAL2,KCNS2	11916,144490
chr3:194174034-194175480	chr3	+	194174452	194175282	True	NR_033929,NM_024524	chr3,chr3	+,-	FLJ34208,ATP13A3	32586,13736
chr3:32549310-32549766	chr3	+	32549414	32549733	True	NM_017801,NM_181472	chr3,chr3	-,+	CMTM6,CMTM7	-5011,-116302
chr16:58006269-58007209	chr16	+	58006339	58007009	True	NM_001297,NM_199456,NM_199046,NM_001135639	chr16,chr16,chr16,chr16	-,+,+,-	CNGB1,TEPP,TEPP,CNGB1	-1319,3329,3329,-1319
chr2:109000845-109002563	chr2	+	109001264	109002393	True	NR_024439,NM_006588	chr2,chr2	-,+	LOC729121,SULT1C4	-558681,-6895
chr12:46128074-46129859	chr12	+	46128373	46129867	True	NR_028408,NM_152641	chr12,chr12	-,+	LOC400027,ARID2	-6669,-4812
chr1:37980562-37980764	chr1	+	37980565	37980793	True	NM_022756,NM_025079	chr1,chr1	-,+	MEAF6,ZC3H12A	-201,-40497
chr5:172383863-172384961	chr5	+	172384002	172384992	True	NM_016093,NR_026682,NR_026683	chr5,chr5,chr5	+,-,-	RPL26L1,LOC100268168,LOC100268168	1446,1429,836
chr19:20278571-20278797	chr19	+	20278634	20278804	True	NM_033196,NM_052852	chr19,chr19	-,+	ZNF682,ZNF486	-128357,-608
chr14:98620195-98622109	chr14	+	98620375	98622054	True	NR_015430,NM_182560	chr14,chr14	-,+	C14orf64,C14orf177	-175914,555895
chr3:187388008-187389125	chr3	+	187388142	187389155	True	NM_001048,NR_034062	chr3,chr3	-,+	SST,LOC100131635	-45,30998
chr7:130352535-130352987	chr7	+	130352552	130352968	True	NM_012133,NR_029899	chr7,chr7	-,+	COPG2,MIR335	680,-216651
chr15:55492967-55493654	chr15	+	55493115	55493542	True	NM_004855,NM_016304	chr15,chr15	+,-	PIGB,RSL24D1	117590,-3884
chr20:61447332-61447612	chr20	+	61447517	61447627	True	NM_001853,NM_006602	chr20,chr20	+,-	COL9A3,TCFL5	786,45538
chr12:43944337-43944827	chr12	+	43944344	43944758	True	NM_025003,NM_001114182	chr12,chr12	-,+	ADAMTS20,IRAK4	1016,207988
chr15:65822072-65822716	chr15	+	65822248	65822568	True	NM_197961,NM_016395	chr15,chr15	-,+	DPP8,PTPLAD1	-12213,258
chr1:231159180-231160827	chr1	+	231159224	231160665	True	NM_022786,NR_031593	chr1,chr1	+,-	ARV1,MIR1182	-44452,-3554
chr12:39981315-39983282	chr12	+	39981392	39983064	True	NM_001031748,NM_005164	chr12,chr12	+,-	C12orf40,ABCD2	36907,30837
chr7:65670864-65671097	chr7	+	65670892	65671110	True	NR_026873,NM_003596	chr7,chr7	-,+	NCRNA00174,TPST1	194335,-684
chr17:78516799-78517149	chr17	+	78516814	78517150	True	NM_002522,NM_020761,NM_001163034	chr17,chr17,chr17	-,+,+	NPTX1,RPTOR,RPTOR	-66410,1474,1474
chr5:134734348-134734605	chr5	+	134734532	134734634	True	NM_138609,NM_138610,NM_004893,NM_001040158,NM_178019	chr5,chr5,chr5,chr5,chr5	-,-,-,-,+	H2AFY,H2AFY,H2AFY,H2AFY,CATSPER3	344,344,993,344,-430987
chr12:120716737-120717598	chr12	+	120716940	120717412	True	NM_002859,NM_012240	chr12,chr12	-,+	PXN,SIRT4	-13377,22711
chr8:102138930-102139363	chr8	+	102139097	102139348	True	NM_001042511,NR_033962	chr8,chr8	-,+	ZNF706,FLJ42969	78576,-74866
chr3:40427208-40427779	chr3	+	40427269	40427741	True	NM_001248,NR_033965	chr3,chr3	+,-	ENTPD3,FLJ33065	931,-76080
chr20:46009995-46010474	chr20	+	46010148	46010200	True	NM_183048,NR_024594	chr20,chr20	-,+	ZMYND8,LOC100131496	-24674,-62953
chr14:53411833-53412265	chr14	+	53411900	53412318	True	NM_001134999,NM_006832,NM_001135000,NM_145251	chr14,chr14,chr14,chr14	-,-,-,+	FERMT2,FERMT2,FERMT2,STYX	5552,5552,5552,-215073
chr7:8260853-8262435	chr7	+	8260958	8262412	True	NM_152745,NM_022307	chr7,chr7	+,-	NXPH1,ICA1	211172,39320
chr8:101119689-101120210	chr8	+	101119690	101120198	True	NM_015668,NM_005034	chr8,chr8	-,+	RGS22,POLR2K	-1346,42640
chr15:42184555-42185154	chr15	+	42184560	42184854	True	NM_016642,NM_001114633	chr15,chr15	-,+	SPTBN5,PLA2G4B	1471,-53600
chr1:10531042-10531879	chr1	+	10531238	10531928	True	NM_213566,NM_004565,NM_004401	chr1,chr1,chr1	-,+,-	DFFA,PEX14,DFFA	735,3074,735
chr15:78736147-78736890	chr15	+	78736327	78736914	True	NM_025234,NM_004136	chr15,chr15	-,+	WDR61,IREB2	-144387,-5872
chr1:46270989-46272340	chr1	+	46271192	46271992	True	NM_005897,NM_015112	chr1,chr1	-,+	IPP,MAST2	-54707,-1966
chr5:67588383-67589235	chr5	+	67588430	67589280	True	NM_181524,NM_181504,NM_176816	chr5,chr5,chr5	+,+,-	PIK3R1,PIK3R1,CCDC125	-4229,-1986,1027189
chrX:14051651-14052172	chrX	+	14051721	14052195	True	NM_001042480,NM_003611,NM_001042479,NM_017856	chrX,chrX,chrX,chrX	-,+,-,-	GEMIN8,OFD1,GEMIN8,GEMIN8	-3686,-298940,-3686,-3686
chr19:12035491-12035898	chr19	+	12035657	12035787	True	NM_144566,NM_001080411	chr19,chr19	+,-	ZNF700,ZNF433	112,110788
chr10:18040990-18041826	chr10	+	18041056	18041462	True	NM_014241,NM_001098844	chr10,chr10	-,+	PTPLA,FAM23A	-381683,29
chr10:18040990-18041826	chr10	+	17794089	17794495	False	NM_014241,NM_001098844	chr10,chr10	-,+	PTPLA,FAM23A	-134716,29
chrX:37646796-37647019	chrX	+	37646796	37647040	True	NM_000397,NM_006520	chrX,chrX	+,-	CYBB,DYNLT3	-7581,59899
chr20:9094783-9095574	chr20	+	9094891	9095529	True	NM_001172646,NM_020341	chr20,chr20	+,-	PLCB4,PAK7	-45252,724208
chr3:108897003-108897856	chr3	+	108897057	108897889	True	NR_026767,NM_014429	chr3,chr3	+,-	C3orf66,MORC1	-97,-60064
chr17:18651646-18652714	chr17	+	18651743	18652583	True	NM_001145045,NM_031456	chr17,chr17	-,+	ZNF286B,FBXW10	-66171,-4468
chr17:18651646-18652714	chr17	-	15518212	15518637	False	NM_006382,NM_001130842	chr17,chr17	-,+	CDRT1,ZNF286A	4431,84253
chr19:14046664-14046945	chr19	+	14046722	14046870	True	NM_138353,NM_024825	chr19,chr19	+,-	DCAF15,PODNL1	16448,2469
chr2:232572100-232572305	chr2	+	232572192	232572272	True	NM_001099285,NR_036052,NR_036263,NR_036262,NM_002823,NM_002601	chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,+,-	PTMA,MIR1244-1,MIR1244-3,MIR1244-2,PTMA,PDE6D	962,5751,5751,5751,962,73752
chr15:54321604-54321967	chr15	+	54321607	54321993	True	NM_182758,NM_001080534	chr15,chr15	-,+	WDR72,UNC13C	-269748,-16574
chr8:38660067-38661908	chr8	+	38660155	38661822	True	NM_006283,NM_001024380	chr8,chr8	+,-	TACC1,TM2D2	-15484,192279
chr2:37460165-37460492	chr2	+	37460175	37460501	True	NM_144736,NM_005760,NM_001083946	chr2,chr2,chr2	+,-,+	C2orf56,CEBPZ,C2orf56	-1452,-1435,-1452
chr7:131372338-131372572	chr7	+	131372397	131372505	True	NM_005397,NM_013255	chr7,chr7	-,+	PODXL,MKLN1	-131021,-359853
chr1:1050157-1050549	chr1	+	1050185	1050551	True	NM_017891,NR_029639	chr1,chr1	-,+	C1orf159,MIR200B	1235,51932
chr16:57834775-57835512	chr16	+	57834845	57835509	True	NM_001130099,NM_001130100,NM_005550,NM_005886	chr16,chr16,chr16,chr16	-,-,-,+	KIFC3,KIFC3,KIFC3,KATNB1	-2916,980,980,-65243
chr19:8410948-8411700	chr19	+	8411353	8411677	True	NM_001039667,NM_198471	chr19,chr19	+,-	ANGPTL4,KANK3	17333,-3207
chr5:114879839-114880134	chr5	+	114879862	114879934	True	NM_020177,NM_001284	chr5,chr5	-,+	FEM1C,AP3S1	707,297684
chr10:35453908-35455789	chr10	+	35454223	35455726	True	NM_001198777,NM_182769,NM_182770,NM_182771,NM_182772	chr10,chr10,chr10,chr10,chr10	-,+,+,+,+	CUL2,CREM,CREM,CREM,CREM	-74653,8797,8797,740,740
chr7:129705747-129707013	chr7	+	129706006	129706832	True	NM_016478,NM_014997	chr7,chr7	-,+	ZC3HC1,KLHDC10	-14773,3516
chr17:58096054-58096492	chr17	+	58096365	58096443	True	NM_003161,NR_002924	chr17,chr17	+,-	RPS6KB1,DHX40P1	-125973,-29
chr21:38073844-38074047	chr21	+	38073895	38074017	True	NM_001146077,NM_005069,NM_009586	chr21,chr21,chr21	-,+,+	CLDN14,SIM2,SIM2	-125028,-1955,-1955
chrX:7151788-7153533	chrX	+	7151804	7153388	True	NM_000351,NM_001178135	chrX,chrX	+,-	STS,HDHD1	-14384,-85573
chr5:52779413-52780899	chr5	+	52779461	52780869	True	NM_013409,NM_006350,NM_176806	chr5,chr5,chr5	+,+,-	FST,FST,MOCS2	-2917,-2917,-373863
chr5:68856066-68856675	chr5	+	68856266	68856554	True	NR_027439,NM_001042490,NM_001098728	chr5,chr5,chr5	-,+,+	LOC100272216,GTF2H2D,GTF2H2C	72524,-243,-266
chr5:68856066-68856675	chr5	+	69711413	69711701	False	NR_033417,NR_033968	chr5,chr5	+,-	GTF2H2B,LOC100049076	-267,139499
chr5:68856066-68856675	chr5	-	70362996	70363284	False	NM_022877,NM_001515	chr5,chr5	+,-	SMN2,GTF2H2	-142279,263
chr11:55648375-55650044	chr11	+	55648451	55650073	True	NM_032681,NM_001001960	chr11,chr11	+,-	SPRYD5,OR5W2	699,32041
chr11:55648375-55650044	chr11	-	55068588	55068644	False	NM_001004700,NM_024114	chr11,chr11	-,+	OR4C11,TRIM48	303261,-38987
chr12:43946491-43947601	chr12	+	43946521	43947645	True	NM_025003,NM_001114182	chr12,chr12	-,+	ADAMTS20,IRAK4	-797,205101
chr7:57202647-57203897	chr7	+	57202658	57203495	True	NM_033273,NR_036102	chr7,chr7	-,+	ZNF479,MIR3147	4128,269235
chr13:60511219-60512461	chr13	+	60511542	60512477	True	NM_030932,NM_001146071	chr13,chr13	-,+	DIAPH3,TDRD3	74917,458113
chr19:19371856-19372276	chr19	+	19371887	19372277	True	NM_023002,NM_004386	chr19,chr19	-,+	HAPLN4,NCAN	1369,-49156
chr4:6785600-6786755	chr4	+	6785639	6786473	True	NM_001100590,NM_203462,NM_014743	chr4,chr4,chr4	+,-,+	KIAA0232,MRFAP1L1,KIAA0232	-1231,-74033,-1231
chr2:173293758-173294216	chr2	+	173293837	173294259	True	NR_026995,NM_000210,NM_001079818	chr2,chr2,chr2	-,+,+	LOC91149,ITGA6,ITGA6	306727,-1574,-1574
chr2:264302-264693	chr2	+	264355	264417	True	NM_007099,NM_001040649,NM_004300,NR_024080,NM_001159597,NM_015677	chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,-,-	ACP1,ACP1,ACP1,ACP1,SH3YL1,SH3YL1	451,451,451,451,-287,-287
chr9:130712171-130712988	chr9	+	130712313	130712761	True	NM_203305,NM_001006641	chr9,chr9	-,+	FAM102A,SLC25A25	282,117717
chr3:107842139-107843785	chr3	+	107842291	107843421	True	NM_007072,NM_198793	chr3,chr3	+,-	HHLA2,CD47	177910,-32356
chr7:151508915-151510189	chr7	+	151508921	151510023	True	NM_145292,NM_001040633	chr7,chr7	+,-	GALNTL5,PRKAG2	143440,1984
chr16:88718882-88719083	chr16	+	88718898	88719108	True	NM_000101,NR_024402	chr16,chr16	-,+	CYBA,MGC23284	-1441,10672
chr9:95095012-95095956	chr9	+	95095261	95095759	True	NR_024020,NM_001012267,NM_017948	chr9,chr9,chr9	-,+,-	NOL8,CENPP,NOL8	-7385,-7585,-7385
chr5:140774562-140775809	chr5	+	140774590	140775678	True	NM_018925,NM_018921,NM_003736,NM_032099,NM_032098,NM_032088,NM_032089,NM_005642,NM_014004	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,+,-,+	PCDHGB5,PCDHGA9,PCDHGB4,PCDHGB5,PCDHGB4,PCDHGA8,PCDHGA9,TAF7,PCDHGA8	2016,6841,-7189,2016,-7189,-3158,6841,-74239,-3158
chrX:69476874-69478363	chrX	+	69477015	69478401	True	NM_004312,NM_002565	chrX,chrX	+,-	ARR3,P2RY4	9783,1303
chr1:85631181-85632818	chr1	+	85631180	85632463	True	NM_145172,NM_032184	chr1,chr1	+,-	WDR63,SYDE2	-103246,34325
chr7:76104926-76105541	chr7	+	76105023	76105592	True	NR_003262,NM_001102596	chr7,chr7	-,+	FDPSL2A,DTX2	-706,4234
chr7:76104926-76105541	chr7	+	76603122	76603691	False	NR_023383,NM_006682	chr7,chr7	+,-	PMS2P11,FGL2	6447,225512
chr12:52869245-52870246	chr12	+	52869450	52870208	True	NM_173086,NM_002284	chr12,chr12	-,+	KRT6C,KRT86	-1881,-173854
chr10:115611977-115613960	chr10	+	115612163	115613704	True	NM_198514,NM_014881	chr10,chr10	+,-	NHLRC2,DCLRE1A	686,205
chrX:38183706-38184142	chrX	+	38183723	38184115	True	NM_001034853,NM_000328,NM_000531	chrX,chrX,chrX	-,-,+	RPGR,RPGR,OTC	2737,2737,27620
chr15:85201435-85201674	chr15	+	85201586	85201694	True	NR_004859,NM_032856,NM_021077,NM_205858	chr15,chr15,chr15,chr15	+,-,-,-	SCAND2,WDR73,NMB,NMB	-26946,-4065,158,158
chr16:20363194-20364260	chr16	+	20363629	20364307	True	NM_001008389,NM_017888,NM_003361	chr16,chr16,chr16	-,+,-	UMOD,ACSM5,UMOD	28,56548,28
chr5:146258244-146258609	chr5	+	146258329	146258653	True	NM_001127381,NM_145001,NM_181675,NM_004576	chr5,chr5,chr5,chr5	-,+,-,-	PPP2R2B,STK32A,PPP2R2B,PPP2R2B	4,355925,-2,-170
chr7:6777234-6777905	chr7	+	6777314	6777554	True	NR_002217,NM_016265	chr7,chr7	+,-	PMS2CL,ZNF12	-2439,-30748
chr11:110164974-110165334	chr11	+	110165097	110165381	True	NM_002906,NM_004109	chr11,chr11	-,+	RDX,FDX1	2106,135212
chr13:60561864-60563671	chr13	+	60562019	60563671	True	NM_030932,NM_001146071	chr13,chr13	-,+	DIAPH3,TDRD3	23722,406919
chr3:184082308-184083481	chr3	+	184082373	184082979	True	NM_004366,NM_001171088,NM_001171087,NM_006232,NM_001171089	chr3,chr3,chr3,chr3,chr3	-,-,-,+,-	CLCN2,CLCN2,CLCN2,POLR2H,CLCN2	-2982,-2982,-2982,-1237,-2982
chr9:132388838-132389252	chr9	+	132388923	132389291	True	NM_199350,NM_014064	chr9,chr9	-,+	C9orf50,METTL11A	-5868,-539
chr3:138316632-138318053	chr3	+	138316874	138317970	True	NM_001033030,NM_001033031,NM_001033032,NM_024491,NM_018147	chr3,chr3,chr3,chr3,chr3	+,+,+,-,+	FAIM,FAIM,FAIM,CEP70,FAIM	9571,9571,9571,-3745,9948
chr12:18417023-18418870	chr12	+	18417243	18418548	True	NM_004570,NM_024730	chr12,chr12	+,-	PIK3C2G,RERGL	-2827,-174129
chr3:148930021-148930369	chr3	+	148930118	148930407	True	NM_000096,NM_032383	chr3,chr3	-,+	CP,HPS3	9477,-82809
chr17:12572211-12573094	chr17	+	12572232	12572929	True	NM_001146312,NM_153604,NM_001165962	chr17,chr17,chr17	+,+,-	MYOCD,MYOCD,ELAC2	-3083,-3083,348507
chr12:80061774-80063603	chr12	+	80062029	80063380	True	NR_031700,NM_002583	chr12,chr12	+,-	MIR1252,PAWR	-249048,21468
chr7:5461490-5461741	chr7	+	5461494	5461666	True	NM_001080495,NM_153247	chr7,chr7	-,+	TNRC18,SLC29A4	1561,-138984
chr20:17673555-17675492	chr20	+	17673816	17675148	True	NM_001014977,NM_001159495,NM_004587,NM_178477	chr20,chr20,chr20,chr20	+,+,-,+	BANF2,BANF2,RRBP1,BANF2	5444,-35,-10888,5444
chr2:153028427-153029307	chr2	+	153028427	153029091	True	NM_052905,NM_005843	chr2,chr2	+,-	FMNL2,STAM2	162659,3465
chr4:13405299-13405723	chr4	+	13405299	13405661	True	NM_001017979,NR_003132	chr4,chr4	-,+	RAB28,HSP90AB2P	80389,-70325
chr4:128557621-128558992	chr4	+	128558092	128558965	True	NM_152778,NM_015693	chr4,chr4	-,+	MFSD8,INTU	328231,-4069
chr8:58192019-58192594	chr8	+	58192026	58192532	True	NR_026772,NM_017813	chr8,chr8	+,-	C8orf71,IMPAD1	25,-285599
chr11:67183413-67184415	chr11	+	67183640	67184436	True	NM_001166222,NM_020811,NM_206873	chr11,chr11,chr11	+,+,-	CARNS1,CARNS1,PPP1CA	-542,-542,-14264
chr2:97000856-97001476	chr2	+	97000863	97001525	True	NM_015341,NM_001163523,NM_001163524,NM_178495,NM_001008949,NM_014014	chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,+,-	NCAPH,ITPRIPL1,ITPRIPL1,ITPRIPL1,ITPRIPL1,SNRNP200	-42,-9845,-8969,-8979,-9852,-29556
chr1:226682682-226684362	chr1	+	226682902	226684314	True	NM_001618,NM_001003665	chr1,chr1	-,+	PARP1,C1orf95	-87101,52186
chr20:62492268-62492811	chr20	+	62492283	62492825	True	NM_080622,NM_025224,NM_199359,NM_003288,NM_199363,NM_199362,NM_199361,NM_199360	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,-,+,+,+,+,+,+	ABHD16B,ZBTB46,TPD52L2,TPD52L2,TPD52L2,TPD52L2,TPD52L2,TPD52L2	-79,-55427,3764,3764,3764,3764,3764,3764
chr14:80682689-80683193	chr14	+	80682714	80683213	True	NM_000793,NM_001018036,NM_001007023,NM_013989	chr14,chr14,chr14,chr14	-,+,-,-	DIO2,TSHR,DIO2,DIO2	-4189,738655,-4871,-4189
chr12:120885037-120886253	chr12	+	120885176	120885900	True	NM_016399,NM_176818,NM_004373,NR_033684	chr12,chr12,chr12,chr12	-,+,+,+	TRIAP1,GATC,COX6A1,GATC	-961,-986,-9323,-986
chr19:52672602-52674102	chr19	+	52672869	52674137	True	NM_001102657,NM_014225	chr19,chr19	-,+	ZNF836,PPP2R1A	810,18917
chr17:3541622-3542217	chr17	+	3541846	3542142	True	NM_004937,NM_001031681,NM_013276	chr17,chr17,chr17	+,+,-	CTNS,CTNS,SHPK	-2143,-2143,-2230
chr14:35760883-35761585	chr14	+	35761111	35761585	True	NM_002791,NM_020529	chr14,chr14	+,-	PSMA6,NFKBIA	-12,112425
chr1:36278932-36279598	chr1	+	36279019	36279087	True	NM_017629,NM_022111	chr1,chr1	+,-	EIF2C4,CLSPN	-5246,-43468
chr1:53662780-53663168	chr1	+	53662915	53663208	True	NM_017887,NM_000098	chr1,chr1	-,+	C1orf123,CPT2	23132,-865
chr11:85953758-85955455	chr11	+	85954393	85955498	True	NM_152991,NM_003797,NM_007166	chr11,chr11,chr11	+,+,-	EED,EED,PICALM	316,316,-174285
chr2:219525838-219526361	chr2	+	219525917	219526365	True	NM_001105537,NM_004328,NM_001079866	chr2,chr2,chr2	-,+,+	ZNF142,BCS1L,BCS1L	-1656,-1589,-1589
chr13:114569364-114570040	chr13	+	114569370	114569992	True	NM_000820,NR_024609	chr13,chr13	-,+	GAS6,FLJ44054	-2324,16617
chr20:32951798-32952402	chr20	+	32951833	32952325	True	NM_031483,NM_001161766	chr20,chr20	+,-	ITCH,AHCY	-828,-52225
chr20:61886919-61887409	chr20	+	61887338	61887420	True	NM_152864,NR_024389	chr20,chr20	-,+	NKAIN4,FLJ16779	-1446,-2059
chr12:6801535-6801810	chr12	+	6801621	6801847	True	NM_001039917,NM_001039916,NM_001039919,NM_001135734,NM_001039920,NM_001039918,NM_133476,NM_001164094,NM_153685	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,-,-,-,-,-,-,+,-	ZNF384,ZNF384,ZNF384,ZNF384,ZNF384,ZNF384,ZNF384,COPS7A,C12orf53	-2952,-3796,-2952,-2945,-2952,-3094,-3094,31302,8015
chr17:74536911-74537851	chr17	+	74537080	74537795	True	NM_134268,NM_001077620	chr17,chr17	-,+	CYGB,PRCD	-3298,-1010
chr13:52983040-52983634	chr13	+	52983039	52983480	True	NM_001098525,NM_199263,NM_018676	chr13,chr13,chr13	+,-,-	CKAP2,THSD1,THSD1	46014,-2410,-2410
chr20:35918699-35919020	chr20	+	35918724	35918838	True	NM_022077,NM_021081,NM_001003897	chr20,chr20,chr20	+,-,+	MANBAL,GHRH,MANBAL	-731,-33425,-731
chr14:89024666-89025009	chr14	+	89024821	89024885	True	NM_207660,NM_207661,NM_001160104,NM_001160103,NM_007039,NM_024824	chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,+,-,+	ZC3H14,ZC3H14,ZC3H14,ZC3H14,PTPN21,ZC3H14	4367,4805,4367,4367,-3698,4367
chr3:129928671-129930411	chr3	+	129929672	129929744	True	NR_027898,NR_024252	chr3,chr3	+,-	COL6A4P2,LOC729375	1918,-99396
chr7:151215302-151215525	chr7	+	151215306	151215574	True	NM_005614,NR_034013	chr7,chr7	-,+	RHEB,LOC100131176	1486,-109035
chr1:145709941-145710218	chr1	+	145709940	145710265	True	NM_001201325,NM_007053	chr1,chr1	+,-	PDZK1,CD160	17400,5350
chr7:56371271-56371473	chr7	+	56371400	56371515	True	NR_029420,NR_026929	chr7,chr7	-,+	LOC650226,DKFZp434L192	144610,192400
chr7:56371271-56371473	chr1	-	155871807	155871862	False	NM_006912,NM_181885	chr1,chr1	-,+	RIT1,RXFP4	9370,39617
chr7:56371271-56371473	chr14	+	63841744	63841799	False	NM_145171,NM_020663	chr14,chr14	-,+	GPHB5,RHOJ	-57181,-170655
chr1:59167663-59168755	chr1	+	59168047	59168581	True	NR_034014,NM_001085487	chr1,chr1	+,-	LOC100131060,MYSM1	82241,-2300
chr14:101425069-101426365	chr14	+	101425105	101426220	True	NR_003201,NR_003200,NR_003203,NR_003205,NR_003204,NR_003206,NR_003193,NR_003195,NR_003194,NR_003197,NR_003196,NR_003199,NR_003198,NM_001134888	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,+,+,+,+,+,+,+,+,+,+,-	SNORD114-9,SNORD114-8,SNORD114-10,SNORD114-12,SNORD114-11,SNORD114-13,SNORD114-1,SNORD114-3,SNORD114-2,SNORD114-5,SNORD114-4,SNORD114-7,SNORD114-6,RTL1	6145,4897,7168,9064,8227,9995,-8997,-5481,-6974,-3460,-4486,3170,-1664,-73921
chr5:16465237-16465507	chr5	+	16465243	16465549	True	NM_033414,NM_006317	chr5,chr5	-,+	ZNF622,BASP1	395,752200
chr15:100882173-100882429	chr15	+	100882190	100882385	True	NR_028140,NM_024708,NM_139057,NR_028139	chr15,chr15,chr15,chr15	-,+,-,-	FLJ42289,ASB7,ADAMTS17,FLJ42289	8103,260369,-7,8588
chr19:9694800-9695108	chr19	+	9694802	9694960	True	NM_001008727,NM_001172651	chr19,chr19	-,+	ZNF121,ZNF177	299,-207861
chr15:90810331-90811527	chr15	+	90810574	90811571	True	NM_001033088,NR_028052,NM_006384	chr15,chr15,chr15	+,+,-	NGRN,NGRN,CIB1	-1730,-1730,-33295
chr9:99417607-99417930	chr9	+	99417765	99417927	True	NR_026792,NM_153698	chr9,chr9	+,-	LOC441455,C9orf21	70175,-166
chr3:58418595-58419178	chr3	+	58418834	58419212	True	NR_033384,NM_001173468,NM_000925,NM_001128214	chr3,chr3,chr3,chr3	-,-,-,+	PDHB,PDHB,PDHB,KCTD6	404,417,417,58610
chr4:123305340-123306518	chr4	+	123305513	123306055	True	NM_000586,NM_001159285,NM_001159295,NM_139243	chr4,chr4,chr4,chr4	-,+,+,+	IL2,ADAD1,ADAD1,ADAD1	71656,-4977,-4977,-5451
chrY:6272282-6273269	chrY	+	6272355	6273210	True	NR_001538,NR_001536	chrY,chrY	+,-	TTTY1,TTTY2	-13934,23332
chrY:6272282-6273269	chrY	-	9597159	9598014	False	NR_001538,NR_003590	chrY,chrY	-,+	TTTY1,TTTY2B	13934,-23322
chr14:24605176-24605465	chr14	+	24605235	24605513	True	NM_016049,NM_006263,NM_176783,NM_203402	chr14,chr14,chr14,chr14	-,+,+,+	FAM158A,PSME1,PSME1,FITM1	5334,-50,-50,-4611
chr6:14890927-14892387	chr6	+	14891900	14891966	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	354560,771375
chr7:4619498-4620105	chr7	+	4620082	4620142	True	NM_020144,NM_001037165	chr7,chr7	-,+	PAPOLB,FOXK1	281533,101787
chr7:74347808-74348054	chr7	+	74347917	74347990	True	NM_001025202,NM_001145063	chr7,chr7	-,+	STAG3L2,GATSL1	-41186,31092
chr7:74347808-74348054	chr7	+	72538459	72538532	False	NR_003664,NR_003580	chr7,chr7	-,+	SPDYE8P,LOC100093631	-38150,30479
chr7:74347808-74348054	chr7	-	74684095	74684168	False	NM_001003795,NR_003580	chr7,chr7	+,-	GTF2IRD2B,LOC100093631	-175800,-30636
chr7:74347808-74348054	chr7	-	74898348	74898421	False	NM_001145064,NR_003664	chr7,chr7	-,+	GATSL2,SPDYE8P	-31007,38111
chr11:3212592-3212986	chr11	+	3212898	3212978	True	NR_027138,NM_145638	chr11,chr11	+,-	C11orf36,OSBPL5	26583,-26316
chr16:31044735-31044945	chr16	+	31044735	31044855	True	NM_004604,NM_052874	chr16,chr16	+,-	STX4,STX1B	47,-22906
chr11:6702504-6704114	chr11	+	6702821	6704091	True	NM_001014795,NM_022061	chr11,chr11	+,-	ILK,MRPL17	-77668,591
chr9:125667890-125668531	chr9	+	125667893	125668536	True	NM_012197,NM_018835,NM_001100588,NM_006626	chr9,chr9,chr9,chr9	+,-,-,-	RABGAP1,RC3H2,RC3H2,ZBTB6	34751,-331,-331,7123
chr22:38243328-38244197	chr22	+	38243514	38244214	True	NR_030395,NM_138797,NM_016091,NR_030396,NR_036556	chr22,chr22,chr22,chr22,chr22	-,-,+,-,-	MIR658,ANKRD54,EIF3L,MIR659,ANKRD54	-3136,-3161,1155,31,-3161
chr2:225258601-225258879	chr2	+	225258725	225258917	True	NM_022915,NM_001122779,NM_024785	chr2,chr2,chr2	+,-,-	MRPL44,FAM124B,FAM124B	-436655,7844,7844
chr14:96831886-96832999	chr14	+	96832223	96832867	True	NM_018036,NM_016472	chr14,chr14	-,+	ATG2B,C14orf129	-2545,13154
chr20:2853404-2853900	chr20	+	2853460	2853763	True	NM_002836,NM_022760,NM_080840	chr20,chr20,chr20	+,-,+	PTPRA,FAM113A,PTPRA	-8670,-32128,378
chr9:5524216-5525203	chr9	+	5524216	5525033	True	NM_025239,NM_018465	chr9,chr9	+,-	PDCD1LG2,C9orf46	-13730,-86356
chr19:10395487-10395713	chr19	+	10395491	10395725	True	NM_003259,NM_001544,NM_001039132,NM_022377,NM_001103167	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	ICAM5,ICAM4,ICAM4,ICAM4,ZGLP1	4929,1924,1924,1924,24558
chr7:100251888-100252640	chr7	+	100251909	100252687	True	NM_005273,NM_016188	chr7,chr7	+,-	GNB2,ACTL6B	18675,1447
chr6:107812641-107813393	chr6	+	107812793	107813325	True	NM_018013,NM_020381	chr6,chr6	+,-	SOBP,PDSS2	-1527,-32014
chr11:129139477-129141286	chr11	+	129139965	129141247	True	NM_001142685,NM_003658	chr11,chr11	-,+	ARHGAP32,BARX2	-77872,104633
chr2:10219433-10219647	chr2	+	10219446	10219647	True	NM_001177718,NM_001037160	chr2,chr2	+,-	KLF11,CYS1	-35125,942
chrX:49023113-49023393	chrX	+	49023179	49023439	True	NM_002668,NM_006150,NM_001099682,NM_001099681,NM_001099680,NM_024859	chrX,chrX,chrX,chrX,chrX,chrX	+,-,+,+,+,+	PLP2,PRICKLE3,MAGIX,MAGIX,MAGIX,MAGIX	4744,19387,-4056,-4056,-2967,-4056
chr5:137911349-137911574	chr5	+	137911367	137911509	True	NM_001964,NM_004134	chr5,chr5	+,-	EGR1,HSPA9	-110238,-49
chr7:127673082-127673394	chr7	+	127673236	127673439	True	NM_022143,NR_027330	chr7,chr7	-,+	LRRC4,C7orf54	-2234,-35725
chr12:109747191-109747461	chr12	+	109747262	109747392	True	NM_213596,NM_001101421	chr12,chr12	-,+	FOXN4,MYO1H	-237,79131
chr10:62704647-62704904	chr10	+	62704654	62704948	True	NM_033379,NR_024556,NM_014836	chr10,chr10,chr10	+,-,-	CDK1,RHOBTB1,RHOBTB1	-166493,-621,-621
chr19:14065195-14066086	chr19	+	14065198	14065641	True	NM_138353,NM_001146255,NM_001146254	chr19,chr19,chr19	+,-,-	DCAF15,PODNL1,PODNL1	-1930,-994,-994
chr12:79350968-79352194	chr12	+	79351191	79352221	True	NM_001135806,NM_002583	chr12,chr12	+,-	SYT1,PAWR	87211,732619
chrX:152157476-152157947	chrX	+	152157539	152157993	True	NM_001184924,NM_001178115,NM_052926,NM_001103151,NM_001103150	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	PNMA5,ZNF185,PNMA5,PNMA5,PNMA5	4728,-47375,2818,2818,2818
chr11:18529608-18530030	chr11	+	18529653	18530083	True	NM_144972,NM_006292	chr11,chr11	+,-	LDHAL6A,TSG101	-52334,18461
chr17:61907644-61907946	chr17	+	61907653	61907839	True	NM_002805,NM_001199163,NM_017647	chr17,chr17,chr17	+,+,-	PSMC5,PSMC5,FTSJ3	-2934,-2660,-2622
chr10:13140545-13140807	chr10	+	13140552	13140713	True	NM_031455,NM_021980,NM_001008212,NM_001008213,NM_001008211	chr10,chr10,chr10,chr10,chr10	-,+,+,+,+	CCDC3,OPTN,OPTN,OPTN,OPTN	-96848,1368,1368,1368,1368
chr3:69985200-69985740	chr3	+	69985209	69985779	True	NM_198178,NM_001184968,NM_000248,NM_015123,NM_198158	chr3,chr3,chr3,chr3,chr3	+,+,+,-,+	MITF,MITF,MITF,FRMD4B,MITF	-29,-29,-29,-549779,-29
chr1:202613234-202613649	chr1	+	202613257	202613665	True	NM_001136504,NM_001197131	chr1,chr1	-,+	SYT2,PPP1R12B	-676,-104066
chr11:94276722-94276989	chr11	+	94276791	94276963	True	NM_005591,NM_002033	chr11,chr11	-,+	MRE11A,FUT4	-49751,53
chr8:69761263-69762655	chr8	+	69761382	69762549	True	NM_052958,NM_001146009	chr8,chr8	+,-	C8orf34,SLCO5A1	-518490,982917
chr7:138922663-138923375	chr7	+	138922834	138923139	True	NM_173569,NM_024625	chr7,chr7	+,-	UBN2,ZC3HAV1	-6662,-128369
chr16:46920877-46921100	chr16	+	46920884	46921112	True	NM_133443,NM_001142466,NM_001001436	chr16,chr16,chr16	+,+,-	GPT2,GPT2,C16orf87	-2627,-1833,-55810
chr19:35423227-35423971	chr19	+	35423420	35423689	True	NM_001099438,NM_175872,NR_024018,NM_194325,NM_001099437	chr19,chr19,chr19,chr19,chr19	+,-,+,+,+	ZNF30,ZNF792,ZNF30,ZNF30,ZNF30	-5678,31321,-5678,-5678,-5678
chr16:1522529-1523465	chr16	+	1522617	1523366	True	NM_001287,NM_001114331,NM_016111	chr16,chr16,chr16	-,-,+	CLCN7,CLCN7,TELO2	1772,1772,19985
chr12:57430433-57431651	chr12	+	57430556	57431580	True	NM_007264,NM_005379	chr12,chr12	+,-	GPR182,MYO1A	-42252,12363
chr16:4985765-4986074	chr16	+	4985802	4986122	True	NM_014692,NM_002705	chr16,chr16	+,-	SEC14L5,PPL	22195,1064
chr19:2838627-2839426	chr19	+	2838627	2838893	True	NM_152791,NM_001172775,NM_003021	chr19,chr19,chr19	+,+,-	ZNF555,ZNF555,SGTA	2539,2539,-55273
chr6:33289717-33289997	chr6_qbl_hap6	+	4522047	4522159	False	NM_001145338,NM_001350,NM_172208,NM_001185181,NM_005453,NM_172209,NM_001141970,NM_003190,NM_001141969	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,TAPBP,PFDN6,ZBTB22,TAPBP,DAXX,TAPBP,DAXX	-4081,941,-7637,-32443,-4288,-7637,941,-7637,941
chr6:33289717-33289997	chr6_mcf_hap5	+	4763540	4763652	False	NM_001145338,NM_001350,NM_172208,NM_001185181,NM_005453,NM_172209,NM_001141970,NM_003190,NM_001141969	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,TAPBP,PFDN6,ZBTB22,TAPBP,DAXX,TAPBP,DAXX	-4078,941,-7634,-32435,-4285,-7634,941,-7634,941
chr6:33289717-33289997	chr6_cox_hap2	+	4733614	4733726	False	NM_001145338,NM_001350,NM_172208,NM_001185181,NM_005453,NM_172209,NM_001141970,NM_003190,NM_001141969	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,TAPBP,PFDN6,ZBTB22,TAPBP,DAXX,TAPBP,DAXX	-4080,943,-7638,-32439,-4287,-7638,943,-7638,943
chr6:33289717-33289997	chr6	+	33289798	33289910	True	NR_024517,NM_001350,NM_001145338,NM_172208,NM_001185181,NM_005453,NM_172209,NM_001141970,NM_003190,NM_001141969	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,-,+,-,-,-,-,-	DAXX,DAXX,ZBTB22,TAPBP,PFDN6,ZBTB22,TAPBP,DAXX,TAPBP,DAXX	941,941,-4079,-7634,-32437,-4286,-7634,941,-7634,941
chr6:33289717-33289997	chr6_dbb_hap3	+	4571123	4571235	False	NM_001145338,NM_001350,NM_172208,NM_001185181,NM_005453,NM_172209,NM_001141970,NM_003190,NM_001141969	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,TAPBP,PFDN6,ZBTB22,TAPBP,DAXX,TAPBP,DAXX	-4080,943,-7636,-32436,-4287,-7636,943,-7636,943
chr6:163836776-163837173	chr6	+	163836946	163837153	True	NM_206854,NM_206855,NM_006775,NR_037593,NM_206853	chr6,chr6,chr6,chr6,chr6	+,+,+,-,+	QKI,QKI,QKI,LOC100526820,QKI	-1322,-1322,-1322,-1964,-1322
chr1:225968773-225970024	chr1	+	225969006	225969802	True	NM_003133,NM_001130440,NM_014698	chr1,chr1,chr1	+,+,-	SRP9,SRP9,TMEM63A	-3543,-3543,100674
chr7:25220207-25222144	chr7	+	25220474	25222186	True	NM_138811,NM_016447	chr7,chr7	-,+	C7orf31,MPP6	-657,-607440
chr19:5840569-5841631	chr19	+	5841095	5841273	True	NM_001040701,NM_000150,NM_004558	chr19,chr19,chr19	-,-,+	FUT6,FUT6,NRTN	-1353,-1353,-17328
chr9:139877546-139877830	chr9	+	139877545	139877807	True	NM_000954,NM_183241,NM_004669,NM_207510	chr9,chr9,chr9,chr9	+,+,-,+	PTGDS,C9orf142,CLIC3,LCNL1	-5640,9062,13267,-151
chr3:193941640-193942071	chr3	+	193941688	193942000	True	NR_024480,NM_005524	chr3,chr3	-,+	LOC100131551,HES1	88643,-87810
chr10:46340993-46341708	chr10	+	46341599	46341675	True	NM_133446,NM_015262	chr10,chr10	-,+	AGAP4,FAM21C	1298,-119008
chr10:46340993-46341708	chr10	+	51485004	51485080	False	NM_001077685,NM_002443	chr10,chr10	-,+	AGAP7,MSMB	1299,64472
chr2:60983523-60983739	chr2	+	60983552	60983722	True	NM_022894,NR_033980	chr2,chr2	+,-	PAPOLG,FLJ16341	-238,124777
chrY:23969351-23969738	chrY	+	23969374	23969766	True	NM_001006120,NM_001006118	chrY,chrY	+,-	RBMY1D,RBMY1E	-272620,70917
chr5:140350764-140352315	chr5	+	140351046	140352173	True	NM_018899,NM_031883,NM_002109	chr5,chr5,chr5	+,+,-	PCDHAC2,PCDHAC2,HARS	-5350,-4745,-280075
chr10:98946170-98946735	chr10	+	98946227	98946781	True	NM_005479,NM_003061	chr10,chr10	+,-	FRAT1,SLIT1	132240,-544
chr10:71930774-71932439	chr10	+	71931080	71932447	True	NM_001142648,NM_018649,NM_020150	chr10,chr10,chr10	-,+,-	SAR1A,H2AFY2,SAR1A	-795,-118774,-795
chr2:219857028-219857681	chr2	+	219857195	219857595	True	NM_057093,NM_057094,NM_017521,NR_024385,NR_029867,NM_005209	chr2,chr2,chr2,chr2,chr2,chr2	-,-,-,+,-,-	CRYBA2,CRYBA2,FEV,LOC151300,MIR375,CRYBA2	589,589,-6816,-16240,8892,583
chr7:6536606-6536955	chr7	+	6536609	6536995	True	NM_006854,NM_001134387	chr7,chr7	-,+	KDELR2,ZDHHC4	-12760,80069
chr4:76860333-76860659	chr4	+	76860399	76860564	True	NM_014435,NM_001042402,NM_001130017	chr4,chr4,chr4	-,-,+	NAAA,NAAA,ART3	1657,1657,71772
chr8:8237276-8239123	chr8	+	8237296	8239046	True	NR_024361,NM_001080826	chr8,chr8	+,-	FLJ10661,SGK223	-151255,261
chr10:105726872-105727091	chr10	+	105726872	105727108	True	NM_024928,NM_014720	chr10,chr10	-,+	OBFC1,SLK	-48827,361
chr11:62649178-62650162	chr11	+	62649188	62650186	True	NR_037193,NR_003098,NM_001013251	chr11,chr11,chr11	+,-,+	SLC3A2,SNHG1,SLC3A2	-68,-25828,-895
chr19:36852595-36854254	chr19	+	36852691	36853975	True	NM_020917,NR_029389	chr19,chr19	-,+	ZFP14,LOC100134317	16192,-50510
chr7:150025020-150026463	chr7	+	150025252	150026273	True	NM_001142928,NM_138434,NM_001164458,NM_023942	chr7,chr7,chr7,chr7	+,+,-,+	LRRC61,C7orf29,ACTR3C,LRRC61	-5008,664,-4494,-5008
chr19:4670598-4671356	chr19	+	4670710	4671384	True	NM_001167942,NM_019107	chr19,chr19	+,-	TNFAIP8L1,C19orf10	-30732,-295
chrX:69643662-69644742	chrX	+	69643809	69644617	True	NM_001171192,NM_001171193,NM_017711,NM_001171191,NM_016484	chrX,chrX,chrX,chrX,chrX	+,+,+,+,-	GDPD2,GDPD2,GDPD2,GDPD2,PDZD11	-979,-979,-979,-979,-134011
chr11:63654431-63654768	chr11	+	63654499	63654717	True	NM_017490,NM_173587	chr11,chr11	+,-	MARK2,RCOR2	1269,29649
chr16:89287657-89288429	chr16	+	89287737	89288426	True	NR_037705,NM_001201407,NM_005187,NM_182531	chr16,chr16,chr16,chr16	+,+,-,+	ZNF778,ZNF778,CBFA2T3,ZNF778	-3678,-3678,-244233,-3678
chrY:25365365-25365636	chrY	+	25365415	25365545	True	NM_020364,NM_020420,NM_001005786,NM_001005785,NM_020363	chrY,chrY,chrY,chrY,chrY	+,+,+,+,+	DAZ3,DAZ4,DAZ2,DAZ2,DAZ2	35,35,58,58,58
chrY:25365365-25365636	chrY	-	25345289	25345419	False	NM_020364,NM_001005375,NM_004081,NM_020420	chrY,chrY,chrY,chrY	+,-,-,-	DAZ3,DAZ4,DAZ1,DAZ4	20161,-35,-50,-35
chrY:25365365-25365636	chrY	+	26979801	26979867	False	NM_020364,NM_001005375,NM_001005785,NM_020420,NM_001005786	chrY,chrY,chrY,chrY,chrY	+,+,+,+,+	DAZ3,DAZ4,DAZ2,DAZ4,DAZ2	99,99,122,99,122
chrY:25365365-25365636	chrY	-	26959674	26959804	False	NM_020364,NM_001005375,NM_020420	chrY,chrY,chrY	-,+,-	DAZ3,DAZ4,DAZ4	-35,20162,-35
chr2:33740403-33741396	chr2	+	33740506	33741182	True	NM_015376,NM_015475	chr2,chr2	+,-	RASGRP3,FAM98A	-1616,83230
chr17:3598753-3599051	chr17	+	3598865	3599097	True	NM_002561,NM_175080,NR_037928,NM_001204520,NM_031298,NM_001204519	chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,+,-	P2RX5,P2RX5,P2RX5-TAX1BP3,P2RX5,TMEM93,P2RX5	651,651,651,651,-26826,651
chr5:68519199-68519714	chr5	+	68519212	68519550	True	NM_033281,NM_176816	chr5,chr5	+,-	MRPS36,CCDC125	-5702,96914
chr9:100818567-100818957	chr9	+	100818566	100818822	True	NM_018946,NM_014788	chr9,chr9	+,-	NANS,TRIM14	136,62708
chr17:38119205-38120477	chr17	+	38119225	38120499	True	NM_178171,NM_139280	chr17,chr17	+,-	GSDMA,ORMDL3	-50,-35341
chr22:21369101-21370123	chr22	+	21369341	21370067	True	NM_001159554,NR_003608,NM_005446	chr22,chr22,chr22	+,-,+	P2RX6,MGC16703,P2RX6	40,-765,62
chr1:45449773-45450517	chr1	+	45450152	45450377	True	NM_000374,NM_020365,NM_001166588	chr1,chr1,chr1	+,-,-	UROD,EIF2B3,EIF2B3	27427,2041,2041
chr13:28743905-28745847	chr13	+	28744214	28745642	True	NR_029383,NM_175854	chr13,chr13	-,+	LOC100288730,PAN3	-30903,-31628
chr12:121410414-121411295	chr12	+	121410749	121411201	True	NR_024345,NM_000545	chr12,chr12	-,+	NCRNA00262,HNF1A	-654,5347
chr19:18716238-18716652	chr19	+	18716367	18716679	True	NM_012109,NM_004750	chr19,chr19	+,-	TMEM59L,CRLF1	7002,1031
chr3:129725253-129725496	chr3	+	129725456	129725540	True	NM_007117,NR_024252	chr3,chr3	+,-	TRH,LOC729375	-32393,104786
chr8:8748822-8749161	chr8	+	8748874	8749210	True	NM_153332,NM_004225	chr8,chr8	+,-	ERI1,MFHAS1	111103,1971
chr15:22082954-22083819	chr15	+	22083065	22083307	True	NR_015416,NM_207355	chr15,chr15	+,-	LOC727924,POTEB	194724,6
chr15:22082954-22083819	chr15	+	21071905	21072146	False	NM_207355,NR_027411	chr15,chr15	-,+	POTEB,GOLGA8C	6,-304282
chr16:812449-812989	chr16	+	812524	813026	True	NM_001025190,NM_005823,NR_030384,NM_001177355,NM_013404	chr16,chr16,chr16,chr16,chr16	-,+,+,+,+	MSLNL,MSLN,MIR662,MSLN,MSLN	19950,-1810,7156,-1809,-1502
chr11:93787539-93788223	chr11	+	93787562	93788264	True	NM_001098672,NM_001144871	chr11,chr11	+,-	HEPHL1,C11orf90	-33242,-203894
chrX:129301571-129301871	chrX	+	129301767	129301829	True	NM_001130847,NM_004794,NM_004208,NM_145812,NM_145813	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	AIFM1,RAB33A,AIFM1,AIFM1,AIFM1	-1906,3943,-1906,-1906,-1906
chr13:38155022-38156710	chr13	+	38155150	38156657	True	NM_001135934,NM_181503	chr13,chr13	-,+	POSTN,EXOSC8	16392,-580528
chrX:55479046-55479254	chrX	+	55479061	55479255	True	NM_014061,NM_201286	chrX,chrX	+,-	MAGEH1,USP51	-575,36426
chr6:46603422-46604571	chr6	+	46603659	46604587	True	NM_016593,NM_001204051	chr6,chr6	-,+	CYP39A1,SLC25A27	15986,16064
chr11:61446694-61447371	chr11	+	61446721	61447129	True	NR_026882,NM_006133	chr11,chr11	-,+	DKFZP434K028,DAGLA	78057,775
chr8:124412843-124413274	chr8	+	124412875	124413303	True	NM_018024,NM_014109	chr8,chr8	+,-	WDYHV1,ATAD2	15661,-4170
chr1:20124688-20126041	chr1	+	20124886	20126040	True	NM_015207,NM_181719	chr1,chr1	+,-	OTUD3,TMCO4	82847,420
chr9:115985161-115986799	chr9	+	115985461	115986711	True	NM_015258,NM_001859	chr9,chr9	-,+	FKBP15,SLC31A1	-1820,-1711
chr1:186414665-186416574	chr1	+	186415102	186416629	True	NM_022375,NM_022576	chr1,chr1	+,-	OCLM,PDC	-45464,1284
chr6:150245622-150246303	chr6	+	150245658	150246180	True	NM_025217,NM_001001788	chr6,chr6	+,-	ULBP2,RAET1G	16955,-1444
chr19:49953325-49954021	chr19	+	49953867	49954070	True	NM_020309,NM_153329,NM_001145396,NM_017916	chr19,chr19,chr19,chr19	-,+,+,-	SLC17A7,ALDH16A1,ALDH16A1,PIH1D1	-9059,2402,2402,1095
chr12:3601609-3601830	chr12	+	3601639	3601863	True	NM_019854,NM_001144958	chr12,chr12	+,-	PRMT8,EFCAB4B	-1265,260553
chrY:1606053-1606521	chrY	+	1606141	1606561	True	NM_178129,NR_027383	chrY,chrY	-,+	P2RY8,AKAP17A	-104,53924
chrY:1606053-1606521	chrX	+	1656141	1656561	False	NM_178129,NR_027383	chrX,chrX	-,+	P2RY8,AKAP17A	-104,53924
chr11:110326017-110327280	chr11	+	110326282	110327154	True	NM_002906,NM_004109	chr11,chr11	-,+	RDX,FDX1	-158845,-25740
chr2:58467626-58468174	chr2	+	58467752	58468091	True	NM_001114636,NM_001130481,NM_018062	chr2,chr2,chr2	-,+,-	FANCL,VRK2,FANCL	474,-193963,474
chr7:134330193-134330441	chr7	+	134330195	134330489	True	NM_001628,NM_001724,NM_199186	chr7,chr7,chr7	-,+,+	AKR1B1,BPGM,BPGM	-186307,1041,1041
chr16:31485235-31485910	chr16	+	31485243	31485869	True	NM_015927,NM_003041,NM_001164719,NM_001042454,NM_001136509	chr16,chr16,chr16,chr16,chr16	+,+,+,+,-	TGFB1I1,SLC5A2,TGFB1I1,TGFB1I1,ZNF843	-768,8569,-1765,-1818,-30895
chr8:32598008-32599248	chr8	+	32598008	32599248	True	NM_032664,NM_001159996	chr8,chr8	-,+	FUT10,NRG1	731467,-18709
chr10:131937412-131937623	chr10	+	131937430	131937564	True	NM_006541,NM_001199868,NR_034125	chr10,chr10,chr10	+,+,-	GLRX3,GLRX3,LOC387723	-2849,-2849,-28349
chr17:26125258-26126257	chr17	+	26125283	26126201	True	NM_000625,NR_024043	chr17,chr17	-,+	NOS2,LGALS9	1404,-167160
chr16:9186672-9187014	chr16	+	9186817	9187031	True	NM_003470,NM_014117	chr16,chr16	-,+	USP7,C16orf72	-129476,-1331
chr12:77273213-77273508	chr12	+	77273276	77273347	True	NM_001321,NM_015336	chr12,chr12	-,+	CSRP2,ZDHHC17	-477,-115479
chr16:87969700-87970441	chr16	+	87969792	87970338	True	NM_001173539,NM_001739	chr16,chr16	+,-	BANP,CA5A	14699,-74
chr16:757344-757840	chr16	+	757414	757886	True	NM_153350,NM_024042	chr16,chr16	-,+	FBXL16,METRN	-1589,7286
chr2:114414488-114415470	chr2	+	114415436	114415518	True	NR_024531,NM_013412	chr2,chr2	-,+	RPL23AP7,RABL2A	-30721,-30670
chr14:91885117-91886357	chr14	+	91885152	91886134	True	NM_001080414,NR_003709	chr14,chr14	-,+	CCDC88C,SNORA11B	-1019,-292433
chr3:156263373-156263725	chr3	+	156263427	156263763	True	NM_015508,NM_007107	chr3,chr3	+,-	TIPARP,SSR3	128441,9260
chr15:69379178-69379378	chr15	+	69379184	69379424	True	NR_026949,NM_006305	chr15,chr15	+,-	NCRNA00277,ANP32A	-6048,-265923
chr12:6562495-6563035	chr12	+	6562529	6562857	True	NM_001242,NM_018009,NR_015382	chr12,chr12,chr12	+,+,-	CD27,TAPBPL,LOC678655	-8529,-1403,-1846
chr2:63815817-63816193	chr2	+	63815838	63816160	True	NM_015910,NM_005917,NM_001199112,NM_001199111	chr2,chr2,chr2,chr2	-,+,+,+	WDPCP,MDH1,MDH1,MDH1	-27,-146,124,124
chr14:21359801-21360153	chr14	+	21359986	21360168	True	NM_002935,NM_198235	chr14,chr14	+,-	RNASE3,RNASE1	-475,-88950
chr10:50894785-50896538	chr10	+	50894834	50896558	True	NM_182554,NM_001042427,NM_001143996	chr10,chr10,chr10	+,+,-	C10orf53,C10orf53,OGDHL	-7201,-7201,73917
chr3:122290914-122291515	chr3	+	122291097	122291418	True	NM_031458,NM_138287,NM_001146106,NM_001146105,NM_001146104,NM_001146103,NM_001146102,NM_001113523	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-,-,+	PARP9,DTX3L,PARP9,PARP9,PARP9,PARP9,PARP9,PARP15	-7574,-7964,-7903,-7950,-7903,-7574,-7950,5030
chr15:25201035-25201627	chr15	+	25201116	25201614	True	NM_003097,NM_022804,NM_130838,NM_005678	chr15,chr15,chr15,chr15	+,+,-,+	SNRPN,SNURF,UBE3A,SNURF	-1032,-1097,449089,-1032
chr12:54410532-54411375	chr12	+	54410556	54411272	True	NM_014620,NR_003716,NM_022658,NM_153693,NR_003084	chr12,chr12,chr12,chr12,chr12	+,-,+,+,+	HOXC4,HOTAIR,HOXC8,HOXC6,HOXC5	-5,-48041,-7724,-5,-5
chr17:4400882-4401584	chr17	+	4400964	4401470	True	NM_001124758,NM_001105538	chr17,chr17	+,-	SPNS2,MYBBP1A	658,57261
chr1:12892612-12893720	chr1	+	12893139	12893393	True	NM_023014,NM_001146344	chr1,chr1	+,-	PRAMEF2,PRAMEF11	23547,-1875
chr4:159445155-159446089	chr4	+	159445182	159446106	True	NM_001008393,NM_021634	chr4,chr4	-,+	C4orf46,RXFP1	147146,-2193
chr6:36926826-36927150	chr6	+	36926920	36927104	True	NM_014341,NM_153370	chr6,chr6	-,+	MTCH1,PI16	26895,-4762
chr18:9615300-9616565	chr18	+	9615396	9616218	True	NM_006868,NM_005134,NM_001042388	chr18,chr18,chr18	+,-,-	RAB31,PPP4R1,PPP4R1	92009,-796,-796
chr13:28543433-28543941	chr13	+	28543435	28543891	True	NM_001265,NR_002162	chr13,chr13	-,+	CDX2,ATP5EP2	-118,-24144
chr1:6846319-6846946	chr1	+	6846416	6846912	True	NM_001195563,NM_018198,NM_015215	chr1,chr1,chr1	+,-,+	CAMTA1,DNAJC11,CAMTA1	-1083,-84450,-1083
chr3:42004228-42005343	chr3	+	42004276	42005392	True	NM_001042646,NM_017886	chr3,chr3	+,-	TRAK1,ULK4	127353,-616
chr4:106816689-106816892	chr4	+	106816791	106816887	True	NM_020395,NM_001184691,NM_001184690,NM_001184693,NM_001184692,NM_001033047	chr4,chr4,chr4,chr4,chr4,chr4	-,+,+,+,+,+	INTS12,NPNT,NPNT,NPNT,NPNT,NPNT	-186910,-245,-245,-245,-245,-245
chr3:58315954-58316902	chr3	+	58316052	58316746	True	NM_017771,NR_033384	chr3,chr3	+,-	PXK,PDHB	1870,102872
chr10:43887708-43888763	chr10	+	43888147	43888743	True	NM_001098208,NM_173160,NM_001098207	chr10,chr10,chr10	-,+,-	HNRNPF,FXYD4,HNRNPF	3594,-21106,4109
chr22:24645401-24646567	chr22	+	24645522	24646564	True	NM_001099782,NM_001099781,NM_004121,NR_003714	chr22,chr22,chr22,chr22	-,-,-,+	GGT5,GGT5,GGT5,POM121L9P	-4412,-4412,-4412,1024
chr22:24645401-24646567	chr22	-	22987684	22987734	False	NM_199127,NR_024591	chr22,chr22	+,-	GGTLC2,POM121L1P	1047,-672
chr22:24645401-24646567	chr22	-	25022281	25022331	False	NR_024593,NR_024494	chr22,chr22	-,+	POM121L10P,BCRP3	32833,6550
chr1:171287174-171287839	chr1	+	171287694	171287893	True	NM_002022,NR_031627	chr1,chr1	+,-	FMO4,MIR1295	-4268,-216747
chr19:13108234-13108497	chr19	+	13108239	13108535	True	NM_002501,NM_052850	chr19,chr19	+,-	NFIX,GADD45GIP1	-1706,-40189
chr4:95259322-95260953	chr4	+	95259832	95260446	True	NM_001011515,NM_014485	chr4,chr4	+,-	PDLIM5,HPGDS	112591,3639
chr15:75492831-75493594	chr15	+	75492950	75493472	True	NM_015492,NR_030360	chr15,chr15	+,-	C15orf39,MIR631	748,152604
chr3:156392680-156392927	chr3	+	156392719	156392826	True	NM_015508,NM_001184718,NR_027954,NM_001184717	chr3,chr3,chr3,chr3	+,+,-,+	TIPARP,TIPARP,LOC100287227,TIPARP	-565,1626,727,-55
chr8:17096652-17097800	chr8	+	17096947	17097843	True	NM_152415,NM_001145152,NM_054026,NM_013354	chr8,chr8,chr8,chr8	+,+,-,-	VPS37A,VPS37A,CNOT7,CNOT7	6557,6557,6594,6594
chr9:69727385-69728676	chrY	+	13592325	13592387	True	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	1181910,941064
chr9:69727385-69728676	chr9	+	69727522	69727946	False	NM_001126334,NR_024443	chr9,chr9	-,+	FOXD4L5,LOC100133920	450919,-76212
chr9:98188416-98189071	chr9	+	98188552	98189021	True	NR_029496,NM_001083607	chr9,chr9	+,-	MIR24-1,PTCH1	-340302,80517
chr19:799605-800057	chr19	+	799665	799916	True	NM_024888,NM_175847,NM_031991,NM_031990,NM_002819	chr19,chr19,chr19,chr19,chr19	-,+,+,+,+	LPPR3,PTBP1,PTBP1,PTBP1,PTBP1	22091,-2324,-2324,-2324,-2324
chr19:43362445-43364166	chr19	+	43362573	43363316	True	NR_026824,NR_036584	chr19,chr19	-,+	PSG10P,LOC100289650	-2703,-36609
chr7:87563456-87563658	chr7	+	87563510	87563636	True	NM_021723,NM_021722,NM_021721,NM_018843,NM_016351,NM_004194	chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,-,+,+	ADAM22,ADAM22,ADAM22,SLC25A40,ADAM22,ADAM22	1,1,1,-57818,1,1
chr1:12815472-12815895	chr1	+	12815534	12815792	True	NM_001146344,NM_152290	chr1,chr1	-,+	PRAMEF11,C1orf158	75522,-9422
chr17:36995057-36995761	chr17	+	36995379	36995498	True	NM_006148,NM_001080465	chr17,chr17	+,-	LASP1,C17orf98	30613,2194
chr8:143809438-143810003	chr8	+	143809491	143810051	True	NM_016647,NM_020427	chr8,chr8	+,-	C8orf55,SLURP1	-921,13828
chr4:4229247-4229637	chr4	+	4229302	4229564	True	NM_145291,NM_177998	chr4,chr4	+,-	ZBTB49,OTOP1	62359,-681
chr20:45146475-45146913	chr20	+	45146535	45146890	True	NM_018102,NM_030777,NM_199441	chr20,chr20,chr20	-,+,-	ZNF334,SLC2A10,ZNF334	-4341,191388,-4341
chr5:149341941-149342887	chr5	+	149342271	149342560	True	NM_000112,NM_000440	chr5,chr5	+,-	SLC26A2,PDE6A	-2022,-17915
chr11:93062062-93063514	chr11	+	93062246	93063383	True	NM_152313,NM_181645	chr11,chr11	-,+	SLC36A4,CCDC67	-131151,499
chr3:180319540-180319905	chr3	+	180319561	180319861	True	NM_001042601,NM_133462,NM_181426	chr3,chr3,chr3	+,+,-	TTC14,TTC14,CCDC39	56,56,77472
chr10:30722103-30722327	chr10	+	30722193	30722294	True	NR_003524,NM_005204	chr10,chr10	-,+	LOC729668,MAP3K8	-58816,571
chr10:95326581-95327030	chr10	+	95326601	95327019	True	NM_001195755,NM_181745,NM_006744	chr10,chr10,chr10	+,+,-	O3FAR1,O3FAR1,RBP4	-230,-230,34024
chr4:4544071-4544752	chr4	+	4544092	4544616	True	NR_037888,NM_016930	chr4,chr4	+,-	LOC100507266,STX18	-285,-317
chr13:52158771-52159102	chr13	+	52158900	52159124	True	NM_052950,NM_001039938	chr13,chr13	+,-	WDFY2,INTS6	-467,-131625
chr6:52949756-52950801	chr6	+	52949929	52950644	True	NM_012347,NM_016513	chr6,chr6	+,-	FBXO9,ICK	-14215,-23329
chr17:15163227-15164170	chr17	+	15163430	15164089	True	NM_000304,NR_033371,NM_153321,NM_153322	chr17,chr17,chr17,chr17	-,+,-,-	PMP22,CDRT7,PMP22,PMP22	4605,-229190,1850,54
chr5:175843759-175844283	chr5	+	175843867	175844307	True	NM_001834,NM_007097,NM_138820	chr5,chr5,chr5	-,-,+	CLTB,CLTB,HIGD2A	-327,-327,-28134
chr17:17381440-17382025	chr17	+	17381635	17381874	True	NM_018019,NM_001199989	chr17,chr17	+,-	MED9,RASD1	-1395,17890
chr13:95134372-95135662	chr13	+	95134376	95135679	True	NM_001922,NM_001129889,NM_180989	chr13,chr13,chr13	-,-,+	DCT,DCT,GPR180	-2440,-2440,118424
chr9:91265723-91267347	chr9	+	91265757	91267282	True	NM_145283,NM_001100111	chr9,chr9	+,-	NXNL2,LOC286238	-115803,-28
chr2:79363915-79365584	chr2	+	79363940	79365564	True	NR_002714,NM_002909	chr2,chr2	-,+	REG1P,REG1A	39,-16407
chr1:67896897-67897116	chr1	+	67896903	67897134	True	NM_001018068,NM_001018069,NM_001559,NM_015640,NM_001018067	chr1,chr1,chr1,chr1,chr1	-,-,+,-,-	SERBP1,SERBP1,IL12RB2,SERBP1,SERBP1	-780,-780,-123907,-780,-780
chr1:100111420-100111978	chr1	+	100111425	100111980	True	NM_017734,NR_030382	chr1,chr1	+,-	PALMD,MIR548D1	-45,66584
chr15:34388664-34389110	chr15	+	34388664	34388836	True	NM_152595,NM_020154	chr15,chr15	+,-	PGBD4,C15orf24	5437,5281
chr21:47471152-47472082	chr21	+	47471285	47471817	True	NM_058174,NM_006657	chr21,chr21	+,-	COL6A2,FTCD	46215,103721
chr17:2699829-2700094	chr17	+	2699889	2700107	True	NM_001100398,NM_015085,NR_031654	chr17,chr17,chr17	+,+,-	RAP1GAP2,RAP1GAP2,MIR1253	-208,-208,-48413
chr8:136469662-136469870	chr8	+	136469708	136469848	True	NR_029599,NM_006558	chr8,chr8	-,+	MIR30D,KHDRBS3	-652520,-43
chr15:41097882-41098507	chr15	+	41098173	41098411	True	NM_018163,NM_001077268	chr15,chr15	-,+	DNAJC17,ZFYVE19	1315,862
chr3:131752602-131753450	chr3	+	131752605	131753440	True	NM_001099,NM_130808	chr3,chr3	+,-	ACPP,CPNE4	282770,454
chr14:55905394-55906368	chr14	+	55905417	55906215	True	NM_004986,NM_199047	chr14,chr14	+,-	KTN1,TBPL2	140709,1098
chr12:42984551-42985751	chr12	+	42984677	42985765	True	NM_016488,NM_153026	chr12,chr12	+,-	PPHLN1,PRICKLE1	-264781,-1105
chr11:118763110-118763426	chr11	+	118763145	118763365	True	NM_001716,NM_182557,NM_032966	chr11,chr11,chr11	+,-,+	CXCR5,BCL9L,CXCR5	-8665,18298,735
chr1:104197605-104198547	chr1	+	104197746	104198561	True	NM_001008221,NM_004038,NM_001008218,NM_001008219	chr1,chr1,chr1,chr1	+,+,+,+	AMY1A,AMY1A,AMY1B,AMY1C	-65,36,59,37
chr1:104197605-104198547	chr1	+	104291884	104292699	False	NM_001008221,NM_004038,NM_001008218,NM_001008219	chr1,chr1,chr1,chr1	+,+,+,+	AMY1A,AMY1A,AMY1B,AMY1C	-65,36,59,37
chr1:104197605-104198547	chr1	-	104238652	104239467	False	NM_001008221,NM_004038,NM_001008218,NM_001008219	chr1,chr1,chr1,chr1	-,-,-,-	AMY1A,AMY1A,AMY1B,AMY1C	65,-36,-59,-37
chr9:37485724-37485929	chr9	+	37485729	37485865	True	NM_022490,NM_014872	chr9,chr9	+,-	POLR1E,ZBTB5	79,-20322
chr15:44119833-44121795	chr15	+	44120070	44121641	True	NM_005926,NM_001167941,NM_024908	chr15,chr15,chr15	-,+,+	MFAP1,WDR76,WDR76	-3119,-1015,-1015
chr1:40149004-40149379	chr1	+	40149117	40149379	True	NM_203456,NM_016257	chr1,chr1	+,-	PPIE,HPCAL4	55137,7760
chr19:46501238-46502887	chr19	+	46501241	46502857	True	NM_002516,NM_001080402,NM_005091	chr19,chr19,chr19	-,+,-	NOVA2,CCDC61,PGLYRP1	-24584,-2953,23749
chr7:93550666-93550967	chr7	+	93550681	93550992	True	NM_004126,NM_006528	chr7,chr7	+,-	GNG11,TFPI2	23,-30616
chr12:133004856-133005176	chr12	+	133004861	133005117	True	NM_001142641,NM_001122636	chr12,chr12	+,-	FBRSL1,GALNT9	62039,-98956
chr19:49375229-49375632	chr19	+	49375434	49375680	True	NM_020904,NM_014330,NM_001161354	chr19,chr19,chr19	-,+,-	PLEKHA4,PPP1R15A,PLEKHA4	-3550,-32,-3550
chr8:109094693-109094931	chr8	+	109094753	109094935	True	NM_178565,NM_014673	chr8,chr8	-,+	RSPO2,TTC35	1028,360917
chr21:33243016-33243810	chr21	+	33243020	33243647	True	NM_020706,NM_014586	chr21,chr21	-,+	SCAF4,HUNK	-138589,1980
chr4:184582025-184582615	chr4	+	184582186	184582516	True	NM_199053,NM_152682,NM_021942	chr4,chr4,chr4	+,-,+	C4orf41,RWDD4,C4orf41	-1798,-1855,-1798
chr17:7555688-7555996	chr17	+	7555710	7555964	True	NM_001678,NM_001126115	chr17,chr17	+,-	ATP1B2,TP53	-1507,22897
chr10:70981900-70982458	chr10	+	70982014	70982362	True	NM_001057,NM_025130	chr10,chr10	-,+	TACR2,HKDC1	194362,-2006
chr19:54977112-54977346	chr19	+	54977175	54977336	True	NM_198988,NM_052925,NM_145057	chr19,chr19,chr19	-,+,-	LENG9,LENG8,CDC42EP5	-2281,-17161,7137
chr6:155051971-155052564	chr6	+	155052302	155052505	True	NM_173515,NM_014892	chr6,chr6	-,+	CNKSR3,SCAF8	-220549,2006
chr1:156254147-156255106	chr1	+	156254183	156254936	True	NR_026678,NM_015327,NM_032323	chr1,chr1,chr1	+,-,+	TMEM79,SMG5,TMEM79	-1530,-1563,-164
chr19:23950037-23950659	chr19	+	23950199	23950497	True	NM_138286,NR_003662	chr19,chr19	-,+	ZNF681,RPSAP58	-8506,-4449
chr12:3187208-3187787	chr12	+	3187208	3187825	True	NM_202003,NM_006675,NM_001168320	chr12,chr12,chr12	-,+,+	FOXM1,TSPAN9,TSPAN9	-200905,-745,-745
chr17:48784186-48784611	chr17	+	48784301	48784547	True	NM_052855,NM_006107	chr17,chr17	-,+	ANKRD40,LUC7L3	773,12378
chr1:27278669-27279191	chr1	+	27278776	27279191	True	NM_006600,NM_152365	chr1,chr1	+,-	NUDC,C1orf172	-30603,7761
chr12:27480441-27481884	chr12	+	27480529	27481792	True	NM_001080406,NM_020183	chr12,chr12	-,+	C12orf71,ARNTL2	-245074,4195
chr10:103600349-103600614	chr10	+	103600375	103600553	True	NM_024747,NM_173195,NM_173191,NM_173192,NM_173193,NM_173194,NM_014591,NM_173197	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,-,-,-,-,-,-,-	HPS6,KCNIP2,KCNIP2,KCNIP2,KCNIP2,KCNIP2,KCNIP2,KCNIP2	224570,3174,3174,3174,3174,-764,3174,3174
chr17:35713614-35715216	chr17	+	35713831	35715150	True	NM_198836,NM_173625	chr17,chr17	-,+	ACACA,C17orf78	960,17834
chr5:148785674-148786300	chr5	+	148785674	148786246	True	NR_027180,NM_014443	chr5,chr5	+,-	LOC728264,IL17B	193,-26836
chr2:74729887-74730158	chr2	+	74729891	74730172	True	NR_024606,NM_001009812,NM_032673	chr2,chr2,chr2	+,-,-	LOC151534,LBX2,PCGF1	-198,321,4699
chr15:91479551-91479779	chr15	+	91479596	91479810	True	NM_018671,NM_198527,NM_001039675	chr15,chr15,chr15	+,-,+	UNC45A,HDDC3,UNC45A	-1432,-3822,-6237
chr19:6371441-6372215	chr19	+	6371752	6372267	True	NM_004158,NM_032306	chr19,chr19	-,+	PSPN,ALKBH7	3647,176
chr15:76196917-76197255	chr15	+	76196932	76197169	True	NM_147188,NR_003136,NM_012170,NR_037623	chr15,chr15,chr15,chr15	+,-,+,+	FBXO22,FBXO22OS,FBXO22,FBXO22	-783,28359,-783,-783
chr8:7442866-7444120	chr8	+	7443262	7444128	True	NM_001040705,NM_001136572	chr8,chr8	+,-	DEFB107B,FAM90A7	-89945,-3087
chr8:7442866-7444120	chr8	-	7110401	7111361	False	NR_027000,NM_001164456,NM_001164452	chr8,chr8,chr8	-,+,+	LOC349196,FAM90A13,FAM90A14	9703,3064,3064
chr8:7442866-7444120	chr8	+	7891254	7892120	False	NR_027424,NR_003668	chr8,chr8	+,-	FAM66E,DEFB109P1B	-78770,-36211
chr8:7442866-7444120	chr8	-	7568940	7569901	False	NM_001164456,NM_001037668,NM_001164452	chr8,chr8,chr8	+,-,+	FAM90A13,DEFB107A,FAM90A14	3063,103387,3063
chrX:16729697-16730002	chrX	+	16729738	16729962	True	NM_032796,NM_019857,NM_001144002,NR_033181,NM_175859	chrX,chrX,chrX,chrX,chrX	+,-,-,+,-	SYAP1,CTPS2,CTPS2,SYAP1,CTPS2	7744,1147,428,7744,863
chr3:58317298-58318404	chr3	+	58317477	58318402	True	NM_017771,NR_033384	chr3,chr3	+,-	PXK,PDHB	214,101214
chr4:83822245-83822470	chr4	+	83822247	83822491	True	NM_001077208,NM_024672,NM_014933,NM_016211,NM_001191049,NM_001077207,NM_001077206,NR_034075,NR_034076,NR_034077	chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4	-,+,-,-,-,-,-,-,-,-	SEC31A,THAP9,SEC31A,SEC31A,SEC31A,SEC31A,SEC31A,LOC100499177,LOC100499177,LOC100499177	-9835,-461,-9828,-9835,-9912,-9835,-9835,-178,-178,-178
chr17:42019053-42019788	chr17	+	42019226	42019830	True	NR_026770,NM_002722	chr17,chr17	+,-	C17orf88,PPY	-24701,53
chr2:71690632-71691589	chr2	+	71690794	71691550	True	NM_001130982,NM_001130983,NM_001130986,NM_001130455,NM_001130984,NM_001130985,NM_020459,NM_001130987	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,+,+,-,+	DYSF,DYSF,DYSF,DYSF,DYSF,DYSF,PAIP2B,DYSF	2281,2281,2281,2281,2281,2281,-236561,2281
chr10:47086331-47086653	chr10	+	47086331	47086604	True	NR_003277,NM_005972	chr10,chr10	-,+	LOC728643,PPYR1	47283,-2850
chr8:8870818-8872300	chr8	+	8871055	8872326	True	NM_153332,NM_004225	chr8,chr8	+,-	ERI1,MFHAS1	-10799,-119924
chr17:256755-258512	chr17	+	257081	258493	True	NM_182705,NM_001013672	chr17,chr17	-,+	FAM101B,C17orf97	37296,1624
chr14:63690209-63691716	chr14	+	63690252	63691540	True	NM_145171,NM_020663	chr14,chr14	-,+	GPHB5,RHOJ	93073,-19169
chr3:133748742-133748970	chr3	+	133748749	133748841	True	NM_021203,NM_005630	chr3,chr3	+,-	SRPRB,SLCO2A1	-245923,129
chr6:10694840-10695160	chr6	+	10694860	10695140	True	NM_001145020,NR_026736,NR_026737,NM_017906	chr6,chr6,chr6,chr6	-,-,-,+	C6orf52,C6orf52,C6orf52,PAK1IP1	-21,-12,-21,47
chr4:141077300-141078995	chr4	+	141077719	141078954	True	NM_018717,NM_032547	chr4,chr4	-,+	MAML3,SCOC	-2486,99485
chrX:77041121-77041551	chrX	+	77041126	77041600	True	NM_138270,NM_001866,NM_000489	chrX,chrX,chrX	-,+,-	ATRX,COX7B,ATRX	169,113360,169
chr1:220265089-220265342	chr1	+	220265228	220265299	True	NM_018060,NM_006085	chr1,chr1	+,-	IARS2,BPNT1	2155,-2037
chr10:51575412-51576239	chr10	+	51575582	51576276	True	NM_005437,NM_001145262,NM_006327	chr10,chr10,chr10	+,+,-	NCOA4,NCOA4,TIMM23	-3269,8,47116
chr1:33934208-33934898	chr1	+	33934232	33934824	True	NM_145238,NM_198040	chr1,chr1	+,-	ZSCAN20,PHC2	3407,-93038
chr15:66647826-66648691	chr15	+	66648118	66648474	True	NM_017858,NR_004388,NM_002755	chr15,chr15,chr15	-,-,+	TIPIN,SCARNA14,MAP2K1	630,-8438,30736
chr7:32529262-32529538	chr7	+	32529298	32529574	True	NM_015060,NM_001130710,NR_024466,NM_001139499,NM_012322	chr7,chr7,chr7,chr7,chr7	+,-,-,-,-	AVL9,LSM5,LSM5,LSM5,LSM5	5601,5346,951,5346,499
chr5:68709984-68710816	chr5	+	68709995	68710787	True	NM_001015892,NM_001038603	chr5,chr5	-,+	TAF9,MARVELD2	-44155,151
chr2:74346401-74347272	chr2	+	74346571	74347230	True	NM_144993,NM_001035505	chr2,chr2	+,-	TET3,BOLA3	-73183,27859
chr11:35964068-35964992	chr11	+	35964133	35964941	True	NM_174902,NM_001101653	chr11,chr11	+,-	LDLRAD3,COMMD9	670,346108
chr2:170219174-170219509	chr2	+	170219278	170219450	True	NM_152384,NM_004525	chr2,chr2	+,-	BBS5,LRP2	116555,-156
chr8:18867119-18867752	chr8	+	18867416	18867774	True	NM_001174160,NM_015310	chr8,chr8	+,-	SH2D4A,PSD3	303306,3472
chr5:41005659-41006558	chr5	+	41005681	41006495	True	NM_000587,NM_173489	chr5,chr5	+,-	C7,HEATR7B2	-96133,65005
chr18:77746707-77746935	chr18	+	77746721	77746902	True	NM_001136180,NM_006701	chr18,chr18	+,-	HSBP1L1,TXNL4A	-22190,1681
chr15:75932737-75932977	chr15	+	75932746	75932954	True	NM_153271,NM_018285	chr15,chr15	+,-	SNX33,IMP3	8393,-82
chr5:90574889-90575461	chr5	+	90575124	90575496	True	NM_020801,NR_027435	chr5,chr5	-,+	ARRDC3,LOC100129716	103703,100667
chr6:56961397-56962808	chr6	+	56961417	56962627	True	NM_001031623,NM_183227,NM_015555	chr6,chr6,chr6	+,-,+	ZNF451,RAB23,ZNF451	-6649,123680,-6649
chr4:89386224-89387579	chr4	+	89386379	89387614	True	NM_016323,NM_001042616	chr4,chr4	+,-	HERC5,PIGY	-8172,57391
chr3:194033777-194034053	chr3	+	194033840	194034102	True	NR_033929,NR_024480	chr3,chr3	+,-	FLJ34208,LOC100131551	173766,-3247
chr11:128811529-128813012	chr11	+	128811802	128812604	True	NM_000890,NM_001195194,NM_001195195,NM_022112	chr11,chr11,chr11,chr11	+,-,-,-	KCNJ5,TP53AIP1,TP53AIP1,TP53AIP1	-50540,-4073,740,740
chr9:21802275-21802502	chr9	+	21802309	21802443	True	NM_058197,NM_002451	chr9,chr9	-,+	CDKN2A,MTAP	172445,191
chr1:228825357-228825737	chr1	+	228825593	228825749	True	NR_002834,NM_033445,NM_021205	chr1,chr1,chr1	+,-,+	DUSP5P,HIST3H2A,RHOU	-44987,-180033,45074
chr7:5080894-5082036	chr7	+	5080904	5082080	True	NM_001204513,NM_021163,NM_001204456,NM_198403	chr7,chr7,chr7,chr7	+,+,+,-	RBAK-LOC389458,RBAK,RBAK,MMD2	3371,3472,3371,-82060
chr6:144383234-144383810	chr6	+	144383629	144383848	True	NM_001080951,NM_001080955,NM_003764	chr6,chr6,chr6	-,-,+	PLAGL1,PLAGL1,STX11	1937,1937,87805
chr5:176236707-176236986	chr5	+	176236707	176236849	True	NM_133369,NM_002115	chr5,chr5	+,-	UNC5A,HK3	710,89534
chr7:26316199-26316797	chr7	+	26316199	26316373	True	NM_031243,NM_001199835	chr7,chr7	-,+	HNRNPA2B1,SNX10	-75786,15141
chr11:56154385-56155022	chr11	+	56154585	56154970	True	NM_001004744,NM_001013356	chr11,chr11	-,+	OR5R1,OR8U8	30801,-11543
chr11:68049436-68049736	chr11	+	68049445	68049785	True	NM_022338,NM_002335	chr11,chr11	-,+	C11orf24,LRP5	-9976,30322
chr8:37280886-37281815	chr8	+	37280905	37281783	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	271517,323837
chr11:111636332-111636679	chr11	+	111636387	111636563	True	NM_181699,NM_181700,NM_022761,NM_002716,NM_001177563,NM_001177562	chr11,chr11,chr11,chr11,chr11,chr11	-,-,+,-,-,-	PPP2R1B,PPP2R1B,C11orf1,PPP2R1B,PPP2R1B,PPP2R1B	656,656,113384,656,656,656
chr9:92099120-92100418	chr9	+	92099201	92100256	True	NM_006378,NM_006705,NM_001142287	chr9,chr9,chr9	-,+,-	SEMA4D,GADD45G,SEMA4D	-4590,119670,-4590
chr18:580445-580760	chr18	+	580494	580794	True	NM_004066,NM_001012716	chr18,chr18	+,-	CETN1,C18orf56	-176,77596
chr17:67412268-67413883	chr17	+	67412347	67413923	True	NM_172232,NM_002758	chr17,chr17	-,+	ABCA5,MAP2K6	-89024,-1562
chr17:43973206-43973527	chr17_ctg5_hap1	-	894076	894320	False	NM_016835,NM_016834,NM_005910,NR_024559,NM_001123067,NM_001123066,NM_016841,NR_024560,NM_001203251,NM_001203252	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	-,-,-,+,-,-,-,-,-,-	MAPT,MAPT,MAPT,LOC100128977,MAPT,MAPT,MAPT,LOC100130148,MAPT,MAPT	1560,1560,1560,373,1560,1560,1560,154,1560,1560
chr17:43973206-43973527	chr17	+	43973252	43973516	True	NM_016835,NM_016834,NM_005910,NR_024559,NM_001123067,NM_001123066,NM_016841,NR_024560,NM_001203251,NM_001203252	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,-,+,+,+,+,+,+	MAPT,MAPT,MAPT,LOC100128977,MAPT,MAPT,MAPT,LOC100130148,MAPT,MAPT	-1555,-1555,-1555,-373,-1555,-1555,-1555,-154,-1555,-1555
chr17:54891659-54891878	chr17	+	54891669	54891871	True	NM_001085430,NM_003647	chr17,chr17	-,+	C17orf67,DGKE	1429,19588
chr19:49176467-49176912	chr19	+	49176719	49176791	True	NM_000511,NM_145807	chr19,chr19	+,-	FUT2,NTN5	22436,-455
chr22:39851156-39851441	chr22	+	39851196	39851293	True	NM_002409,NM_194326	chr22,chr22	+,-	MGAT3,RPS19BP1	2031,77626
chr7:152163980-152164753	chr7	+	152164062	152164607	True	NM_170606,NR_027387	chr7,chr7	-,+	MLL3,LOC100128822	-30972,-2914
chr16:68282379-68283153	chr16	+	68282589	68283108	True	NM_024939,NM_012320	chr16,chr16	-,+	ESRP2,PLA2G15	-12453,-3394
chr8:10590287-10590520	chr8	+	10590318	10590496	True	NM_001040032,NM_031439	chr8,chr8	+,-	C8orf74,SOX7	-60222,-2296
chr3:54154822-54155082	chr3	+	54154947	54155099	True	NM_018398,NM_021237	chr3,chr3	+,-	CACNA2D3,SELK	1593,-228958
chr18:33875229-33875823	chr18	+	33875266	33875854	True	NM_001099406,NM_025135	chr18,chr18	-,+	SLC39A6,FHOD3	-165909,1847
chr11:2169270-2169768	chr11	+	2169274	2169806	True	NM_001127598,NM_000612,NR_028043,NR_028044,NM_001007139	chr11,chr11,chr11,chr11,chr11	-,-,+,+,-	IGF2,IGF2,IGF2AS,IGF2AS,IGF2	-6933,-9070,-7567,-7567,1077
chr7:150066036-150066249	chr7	+	150066186	150066286	True	NM_002889,NM_013400,NM_014374,NM_001099695,NM_001099696	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	RARRES2,REPIN1,REPIN1,REPIN1,REPIN1	-27423,-358,1971,-358,-358
chr19:36036869-36037244	chr19	+	36036989	36037173	True	NM_032635,NM_000704	chr19,chr19	+,-	TMEM147,ATP4A	-495,17437
chr2:233244524-233245134	chr2	+	233244523	233245173	True	NR_028501,NM_001632	chr2,chr2	-,+	ECEL1P2,ALPP	6631,-1226
chrX:47051336-47051588	chrX	+	47051396	47051492	True	NM_003334,NM_153280,NR_024235	chrX,chrX,chrX	+,+,-	UBA1,UBA1,NDUFB11	1708,-1257,-46787
chr6:139089839-139090515	chr6	+	139089917	139090505	True	NM_015439,NM_020464	chr6,chr6	+,-	CCDC28A,NHSL1	4151,-196249
chr3:52571819-52572636	chr3	+	52571828	52572388	True	NM_001124767,NM_001134231,NM_022908	chr3,chr3,chr3	+,-,-	C3orf78,NT5DC2,NT5DC2	-1258,-4035,-2735
chr1:82266692-82267246	chr1	+	82266816	82266998	True	NM_012302,NM_024686	chr1,chr1	+,-	LPHN2,TTLL7	-785,2197885
chr14:20791807-20793300	chr14	+	20792109	20792931	True	NM_182851,NM_182852,NM_001042618,NM_182849,NR_003693,NM_021178	chr14,chr14,chr14,chr14,chr14,chr14	-,-,+,-,-,-	CCNB1IP1,CCNB1IP1,PARP2,CCNB1IP1,SNORD126,CCNB1IP1	4655,4652,18841,8576,1817,8576
chr19:16243229-16244362	chr19	+	16243228	16244331	True	NM_032855,NM_054113	chr19,chr19	+,-	HSH2D,CIB3	506,40014
chr5:140779029-140779432	chr5	+	140779028	140779280	True	NM_018925,NM_032100,NM_018921,NM_032099,NM_032088,NM_032089,NM_018926,NM_005642,NM_014004	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,+,-,+	PCDHGB5,PCDHGB6,PCDHGA9,PCDHGB5,PCDHGA8,PCDHGA9,PCDHGB6,TAF7,PCDHGA8	-1384,8489,3239,-1384,-7596,3239,8489,-78677,-7596
chr1:84552083-84552487	chr1	+	84552123	84552417	True	NM_207578,NM_024686,NM_002731	chr1,chr1,chr1	+,-,+	PRKACB,TTLL7,PRKACB	-8429,-87290,-8429
chr9:95898966-95899495	chr9	+	95898978	95899532	True	NM_004148,NM_032310	chr9,chr9	-,+	NINJ1,C9orf89	-2408,-40579
chr9:71395831-71396675	chr9	+	71395835	71396724	True	NM_002732,NM_138333	chr9,chr9	-,+	PRKACG,FAM122A	232365,-922
chr19:50433937-50434200	chr19	+	50433951	50434199	True	NM_001193357,NM_016553,NM_012068,NM_012346,NM_001193646,NM_153718,NM_153719,NM_172374	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,+,-,+,-,-,-	NUP62,NUP62,ATF5,NUP62,ATF5,NUP62,NUP62,IL4I1	-1152,-963,-2043,-1178,-1602,-1163,-1163,-1189
chr8:27490324-27490625	chr8	+	27490347	27490417	True	NM_016240,NM_001831,NM_182826	chr8,chr8,chr8	+,-,+	SCARA3,CLU,SCARA3	1159,-18020,1159
chr19:8950782-8952002	chr19	+	8950930	8952050	True	NM_145208,NM_144693	chr19,chr19	+,-	MBD3L1,ZNF558	1218,-17365
chr3:107908179-107909143	chr3	+	107908189	107908963	True	NM_018010,NM_007072	chr3,chr3	-,+	IFT57,HHLA2	32504,112368
chr10:48184719-48184933	chr10	+	48184718	48184870	True	NM_002900,NR_024495	chr10,chr10	-,+	RBP3,LOC642826	206171,985
chr10:48184719-48184933	chr10	-	48953458	48953610	False	NR_026566,NM_153034,NR_003611	chr10,chr10,chr10	-,+,-	BMS1P1,ZNF488,BMS1P5	-829,-598420,-829
chr10:48184719-48184933	chr10	-	46763721	46763873	False	NR_027632,NR_026566,NR_003611	chr10,chr10,chr10	+,-,-	FAM35B,BMS1P1,BMS1P5	133767,-829,-829
chr10:48184719-48184933	chr10	-	47244486	47244638	False	NR_027634,NR_024495	chr10,chr10	+,-	FAM35B2,LOC642826	135081,-992
chr14:103763444-103764069	chr14	+	103763450	103764046	True	NR_033938,NM_001969	chr14,chr14	-,+	LOC100131366,EIF5	-108085,36446
chr2:100106990-100107193	chr2	+	100106990	100107238	True	NM_015904,NM_001037872,NM_016316	chr2,chr2,chr2	+,-,-	EIF5B,REV1,REV1	-153207,-510,-510
chr8:24204508-24204946	chr8	+	24204584	24204954	True	NM_003155,NM_001145271	chr8,chr8	-,+	STC1,ADAMDEC1	-492264,36843
chr1:16694231-16694473	chr1	+	16694349	16694409	True	NM_018994,NM_015609,NM_001114600	chr1,chr1,chr1	-,+,+	FBXO42,C1orf144,C1orf144	-15401,-817,-817
chr7:158800545-158800776	chr7	+	158800578	158800780	True	NM_003382	chr7	-	VIPR2	136919
chr20:275599-277030	chr20	+	275684	277007	True	NM_033089,NM_153269	chr20,chr20	+,-	ZCCHC3,C20orf96	1196,-4294
chr1:159797782-159798211	chr1	+	159797935	159798259	True	NM_001134233,NM_020125	chr1,chr1	-,+	C1orf204,SLAMF8	26928,-1508
chr19:37702093-37703402	chr19	+	37702126	37702981	True	NM_152279,NM_152604	chr19,chr19	-,+	ZNF585B,ZNF383	-675,14384
chr17:67028831-67029370	chr17	+	67028847	67029184	True	NM_080283,NM_002758	chr17,chr17	-,+	ABCA9,MAP2K6	28011,381653
chr2:3623813-3624159	chr2	+	3623891	3624031	True	NM_001011,NM_002936	chr2,chr2	+,-	RPS7,RNASEH1	-1101,-17951
chr1:207226839-207227052	chr1	+	207226858	207227078	True	NM_001018053,NM_018566,NM_006212	chr1,chr1,chr1	+,-,+	PFKFB2,YOD1,PFKFB2	-289,-2436,-289
chr12:97330472-97331066	chr12	+	97330509	97331083	True	NM_002595,NM_001135175	chr12,chr12	-,+	CDK17,NEDD1	-536143,-29323
chr1:155289621-155290234	chr1	+	155289872	155290216	True	NM_001105205,NM_001105204,NM_014328,NM_001039517,NM_001105203	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	RUSC1,RUSC1,RUSC1,C1orf104,RUSC1	3511,423,4001,3772,423
chr17:39724271-39724526	chr17	+	39724278	39724562	True	NM_000226,NM_005801	chr17,chr17	-,+	KRT9,EIF1	3798,120564
chr1:44446796-44447035	chr1	+	44446886	44446950	True	NM_003780,NM_004047,NM_001005417,NM_006934,NM_001039457	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	B4GALT2,ATP6V0B,B4GALT2,SLC6A9,ATP6V0B	-2071,-6335,-754,36097,-6335
chr2:34200041-34201262	chr2	+	34200235	34200969	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-461344,-246951
chr7:32528456-32529251	chr7	+	32528618	32529276	True	NM_015060,NM_001130710,NR_024466,NM_001139499,NM_012322	chr7,chr7,chr7,chr7,chr7	+,-,-,-,-	AVL9,LSM5,LSM5,LSM5,LSM5	5899,5644,1249,5644,797
chr21:34637032-34638033	chr21	+	34637324	34638066	True	NM_000628,NR_024102	chr21,chr21	+,-	IL10RB,C21orf54	605,-94783
chr20:43972941-43973153	chr20	+	43972944	43973176	True	NM_002999,NM_001197129	chr20,chr20	-,+	SDC4,SYS1	3938,17400
chrX:40948043-40949289	chrX	+	40948150	40948809	True	NM_001039591,NM_001039590,NR_027761	chrX,chrX,chrX	+,+,-	USP9X,USP9X,LOC100132831	-3313,-3313,-255701
chr11:95657583-95658606	chr11	+	95657655	95658631	True	NM_201278,NM_014679,NM_016156,NM_201281,NR_023356	chr11,chr11,chr11,chr11,chr11	-,+,-,-,-	MTMR2,CEP57,MTMR2,MTMR2,MTMR2	-284,-134070,-284,-284,-284
chr10:123749716-123751153	chr10	+	123750045	123751193	True	NM_017615,NM_206861,NM_206862	chr10,chr10,chr10	-,+,+	NSMCE4A,TACC2,TACC2	-15302,-1407,-1407
chr20:32720999-32722213	chr20	+	32721809	32722251	True	NM_001672,NM_003908	chr20,chr20	+,-	ASIP,EIF2S2	125919,-21724
chr2:5831673-5831879	chr2	+	5831728	5831912	True	NR_034134,NM_003108	chr2,chr2	-,+	LOC727982,SOX11	-1127916,886
chr19:41884827-41886399	chr19	+	41885615	41886384	True	NM_001098824,NM_030578,NM_001098821,NM_001098822,NM_001098823,NM_001042595	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+	TMEM91,B9D2,TMEM91,TMEM91,TMEM91,TMEM91	-3230,-15537,-3230,-3230,-3230,-2499
chr5:150463592-150465365	chr5	+	150463608	150464897	True	NM_002084,NM_006058	chr5,chr5	+,-	GPX3,TNIP1	-63660,-2611
chr20:30798608-30799167	chr20	+	30798795	30799083	True	NM_015352,NM_172236,NM_002657	chr20,chr20,chr20	+,+,-	POFUT1,POFUT1,PLAGL2	-3150,-3150,-3249
chr10:86085993-86086893	chr10	+	86086276	86086408	True	NM_018999,NM_015613	chr10,chr10	+,-	FAM190B,LRIT1	2001,-85059
chr17:19549527-19549867	chr17	+	19549825	19549887	True	NM_001099646,NM_000382,NM_001031806	chr17,chr17,chr17	-,+,+	SLC47A2,ALDH3A2,ALDH3A2	70206,2176,2176
chr11:130296839-130297122	chr11	+	130296925	130297115	True	NM_007037,NM_139055	chr11,chr11	-,+	ADAMTS8,ADAMTS15	1474,21753
chr3:68055730-68056507	chr3	+	68055732	68056470	True	NM_213609,NM_003848	chr3,chr3	+,-	FAM19A1,SUCLG2	-2329,-350694
chr3:42852500-42853363	chr3	+	42852629	42853259	True	NM_001296,NM_001099669,NM_001099668,NM_014056	chr3,chr3,chr3,chr3	+,-,-,-	CCBP2,HIGD1A,HIGD1A,HIGD1A	-1718,-6602,-6695,-6602
chr6:28216395-28217794	chr6	+	28216818	28217810	True	NM_001007531,NM_019110	chr6,chr6	+,-	NKAPL,ZKSCAN4	9287,2242
chr17:30769336-30770121	chr17	+	30769347	30770049	True	NM_002815,NM_022344	chr17,chr17	+,-	PSMD11,C17orf75	1452,-100158
chr13:36948027-36949989	chr13	+	36948267	36950028	True	NM_001111046,NM_001142294	chr13,chr13	+,-	CCNA1,SPG20	55938,-3950
chrX:100646233-100646466	chrX	+	100646324	100646467	True	NM_000061,NM_021029,NM_001199974,NM_001199972,NM_001199973	chrX,chrX,chrX,chrX,chrX	-,+,+,+,+	BTK,RPL36A,RPL36A-HNRNPH2,RPL36A,RPL36A-HNRNPH2	-5112,-497,-497,-497,-497
chr7:91764682-91765229	chr7	+	91764995	91765196	True	NM_001146152,NM_000786,NM_019004	chr7,chr7,chr7	-,-,+	CYP51A1,CYP51A1,ANKIB1	-936,-1155,110351
chr5:39074862-39075148	chr5	+	39074944	39075055	True	NM_003999,NM_152756	chr5,chr5	+,-	OSMR,RICTOR	-228894,-443
chr11:73668220-73668517	chr11	+	73668307	73668509	True	NM_153614,NM_003355	chr11,chr11	+,-	DNAJB13,UCP2	-6994,25430
chr3:137717898-137718278	chr3	+	137718078	137718242	True	NM_001002026,NM_001170538	chr3,chr3	+,-	CLDN18,DZIP1L	-471,114130
chr12:5540114-5540314	chr12	+	5540158	5540260	True	NM_020373,NM_001102654	chr12,chr12	-,+	ANO2,NTF3	515188,1019
chr11:450824-451316	chr11	+	451052	451190	True	NM_030783,NM_001012302	chr11,chr11	+,-	PTDSS2,ANO9	-823,-9041
chr5:33937078-33937417	chr5	+	33937190	33937416	True	NM_016568,NM_030955	chr5,chr5	+,-	RXFP3,ADAMTS12	-750,-45066
chr20:26087513-26089120	chr20	+	26087814	26088709	True	NR_003678,NR_026713	chr20,chr20	-,+	C20orf191,FAM182A	6027,-52615
chr15:25463717-25464902	chr15	+	25464115	25464819	True	NR_003315,NR_003358,NR_003495,NR_003496,NR_003497,NR_022010,NR_003344,NR_003345,NR_003351,NR_003314,NM_130838,NR_003342,NR_003343,NR_003347,NR_003303,NR_003346	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,+,-,+,+,+,+,+	SNORD115-23,SNORD115-43,SNORD115-24,HBII-52-27,HBII-52-28,PAR4,SNORD115-29,SNORD115-30,SNORD115-36,SNORD115-22,UBE3A,SNORD115-25,SNORD115-26,SNORD115-32,SNORD115-11,SNORD115-31	-7223,3573,-5360,830,2681,-7327,3573,5530,3573,-9101,185884,-3478,-402,9294,3573,7436
chr22:31519509-31519842	chr22	+	31519531	31519883	True	NM_080430,NM_001002837	chr22,chr22	-,+	SELM,INPP5J	-15980,-621
chr6:89768718-89769012	chr6	+	89768724	89768968	True	NM_006813,NM_080743	chr6,chr6	+,-	PNRC1,SRSF12	21460,58882
chr22:41135630-41137492	chr22	+	41135793	41137364	True	NM_006358,NM_005297	chr22,chr22	-,+	SLC25A17,MCHR1	78081,-60663
chr7:5918803-5919035	chr7	+	5918938	5919074	True	NM_001097622,NM_001099697	chr7,chr7	+,-	OCM,RSPH10B2	1354,91290
chr15:74375104-74375533	chr15	+	74375341	74375447	True	NM_001130136,NM_001038640	chr15,chr15	+,-	ISLR2,GOLGA6A	46267,-450
chr15:74375104-74375533	chr15	-	72946481	72946587	False	NR_002780,NM_018652	chr15,chr15	-,+	HIGD2B,GOLGA6B	31967,450
chr15:74375104-74375533	chr15	-	75550342	75550448	False	NR_030360,NM_001164404	chr15,chr15	-,+	MIR631,GOLGA6C	95642,450
chr15:74375104-74375533	chr15	-	75574619	75574725	False	NR_030360,NM_001145224	chr15,chr15	-,+	MIR631,GOLGA6D	71365,456
chr1:26736011-26736599	chr1	+	26736135	26736573	True	NM_173574,NM_024674	chr1,chr1	-,+	ZNF683,LIN28A	-36869,695
chr8:73446393-73448061	chr8	+	73446401	73447789	True	NM_004770,NR_033867	chr8,chr8	+,-	KCNB2,LOC392232	1836,-282532
chr7:137030647-137031695	chr7	+	137030714	137031740	True	NM_002825,NR_030165	chr7,chr7	-,+	PTN,MIR490	-2168,-442858
chr12:8662934-8663186	chr12	+	8663056	8663179	True	NM_014358,NM_080387	chr12,chr12	-,+	CLEC4E,CLEC4D	30436,2956
chrX:140965864-140967023	chrX	+	140966019	140966581	True	NM_145665,NM_177456	chrX,chrX	-,+	SPANXE,MAGEC3	-179364,15870
chr6:35110232-35111431	chr6	+	35110283	35111261	True	NM_018679,NM_152753,NM_001093728	chr6,chr6,chr6	-,+,-	TCP11,SCUBE3,TCP11	-1096,70928,-1096
chr12:46754951-46756415	chr12	+	46755136	46756386	True	NM_152641,NM_018976	chr12,chr12	+,-	ARID2,SLC38A2	-631575,10317
chr1:36620868-36621098	chr1	+	36620872	36621146	True	NM_014408,NM_018067	chr1,chr1	-,+	TRAPPC3,MAP7D1	-5805,656
chr11:47789106-47789509	chr11	+	47789126	47789292	True	NM_001164379,NM_015308	chr11,chr11	+,-	FAM180B,FNBP4	-180947,-133
chr11:1592299-1592554	chr11	+	1592413	1592487	True	NM_004420,NR_021489	chr11,chr11	-,+	DUSP8,LOC338651	713,1483
chr11:129246278-129247711	chr11	+	129246407	129247723	True	NM_001142685,NM_003658	chr11,chr11	-,+	ARHGAP32,BARX2	-184314,-578
chr19:45998219-45999583	chr19	+	45998379	45999555	True	NM_005619,NM_001080401,NM_206900,NM_206901	chr19,chr19,chr19,chr19	-,+,-,-	RTN2,PPM1N,RTN2,RTN2	806,2175,808,-1905
chr11:64530385-64531951	chr11	+	64530566	64531674	True	NM_006244,NM_001164716,NM_005609	chr11,chr11,chr11	+,-,-	PPP2R5B,PYGM,PYGM	160468,-2379,-2379
chr5:170737413-170737841	chr5	+	170737539	170737853	True	NM_021025,NR_037474	chr5,chr5	+,-	TLX3,MIR3912	-1302,75961
chr2:197503217-197504190	chr2	+	197503306	197504162	True	NM_020760,NM_001080539	chr2,chr2	-,+	HECW2,CCDC150	-45971,193
chr1:151139625-151139878	chr1	+	151139642	151139912	True	NM_013353,NR_037937,NM_001204856,NM_001136543,NM_024041,NM_212551	chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,-,+,-	TMOD4,SCNM1,SCNM1,LYSMD1,SCNM1,LYSMD1	8685,-1204,-1204,-1218,-1204,-1272
chr15:64676662-64677363	chr15	+	64676966	64677412	True	NM_001029989,NM_016213,NM_014736	chr15,chr15,chr15	-,+,-	KIAA0101,TRIP4,KIAA0101	-3264,2590,-3264
chr5:79272246-79273840	chr5	+	79272420	79273864	True	NM_003248,NM_001010891	chr5,chr5	+,-	THBS4,MTX3	57305,13274
chr19:29413979-29415731	chr19	+	29414021	29415758	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	40279,288428
chr17:37763470-37763942	chr17	+	37763571	37763991	True	NM_032192,NM_006160	chr17,chr17	+,-	PPP1R1B,NEUROD2	19187,234
chr20:49572985-49574364	chr20	+	49573237	49574411	True	NM_003859,NM_014484	chr20,chr20	-,+	DPM1,MOCS3	699,951
chr6:15657053-15658547	chr6	+	15657056	15658477	True	NM_183040,NR_036448,NM_004973,NM_032122	chr6,chr6,chr6,chr6	-,-,+,-	DTNBP1,DTNBP1,JARID2,DTNBP1	4863,4863,-410580,4863
chr11:46612385-46613126	chr11	+	46612520	46613117	True	NM_017749,NM_001205120	chr11,chr11	-,+	AMBRA1,ATG13	-4,25708
chr13:77903596-77904004	chr13	+	77903680	77903886	True	NM_015057,NM_001160706	chr13,chr13	-,+	MYCBP2,SCEL	-2503,205922
chr6:29763812-29765268	chr6_mcf_hap5	+	1064903	1064980	False	NM_002127,NR_002139	chr6_mcf_hap5,chr6_mcf_hap5	+,-	HLA-G,HCG4	30054,-3594
chr6:29763812-29765268	chr6_dbb_hap3	+	1065246	1065323	False	NM_002127,NR_002139	chr6_dbb_hap3,chr6_dbb_hap3	+,-	HLA-G,HCG4	30053,-3603
chr6:29763812-29765268	chr6_mann_hap4	+	1064965	1065042	False	NM_002127,NR_002139	chr6_mann_hap4,chr6_mann_hap4	+,-	HLA-G,HCG4	30043,-3696
chr6:29763812-29765268	chr6_ssto_hap7	+	1102179	1102256	False	NM_002127,NR_002139	chr6_ssto_hap7,chr6_ssto_hap7	+,-	HLA-G,HCG4	30051,-3657
chr6:29763812-29765268	chr6	+	29764623	29764700	True	NM_002127,NR_002139	chr6,chr6	+,-	HLA-G,HCG4	30055,-3773
chr8:97678990-97679667	chr8	+	97679004	97679433	True	NM_016134,NM_015942	chr8,chr8	+,-	PGCP,MTERFD1	-21563,-405208
chr4:39033866-39035410	chr4	+	39033939	39035456	True	NM_024943,NM_001007075	chr4,chr4	-,+	TMEM156,KLHL5	32,10994
chr9:44021889-44022256	chr9	+	44022019	44022105	True	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	-391289,-337185
chr9:44021889-44022256	chr9	+	66369456	66369542	False	NR_024443,NR_024496	chr9,chr9	-,+	LOC100133920,LOC442421	661490,124726
chr11:9446145-9447007	chr11	+	9446340	9446846	True	NR_002962,NR_036539	chr11,chr11	+,-	SNORA23,LOC644656	3466,35463
chr12:58158602-58159022	chr12	+	58158696	58159004	True	NM_000785,NM_015433,NM_023033,NM_005371,NM_138396,NM_206914	chr12,chr12,chr12,chr12,chr12,chr12	-,+,-,-,+,+	CYP27B1,METTL21B,METTL1,METTL1,MARCH9,METTL21B	2022,7378,6960,6960,-9847,7378
chr10:134211116-134211437	chr10	+	134211115	134211377	True	NM_001098637,NM_138499,NM_173575	chr10,chr10,chr10	+,+,-	PWWP2B,PWWP2B,STK32C	-465,-465,-89638
chr11:79149542-79149858	chr11	+	79149636	79149858	True	NM_001098816,NM_020798	chr11,chr11	-,+	ODZ4,USP35	1887,-1249829
chr7:34717924-34718158	chr7	+	34718076	34718158	True	NR_033664,NM_207173	chr7,chr7	-,+	AAA1,NPSR1	79776,-20241
chr11:117665959-117666281	chr11	+	117665964	117666234	True	NM_020693,NM_001558	chr11,chr11	-,+	DSCAML1,IL10RA	1792,190871
chr1:209768384-209768874	chr1	+	209768468	209768906	True	NM_020439,NR_036213	chr1,chr1	+,-	CAMK1G,MIR4260	-11474,27999
chr15:64675113-64675483	chr15	+	64675212	64675505	True	NM_014736,NM_001029989,NM_016213	chr15,chr15,chr15	-,-,+	KIAA0101,KIAA0101,TRIP4	-1510,-1510,4497
chr7:154001469-154001857	chr7	+	154001533	154001847	True	NM_001936,NM_007349	chr7,chr7	+,-	DPP6,PAXIP1	499,792885
chr7:134854345-134854681	chr7	+	134854353	134854646	True	NM_018295,NR_024186,NR_024185,NM_024033	chr7,chr7,chr7,chr7	+,-,-,-	TMEM140,C7orf49,C7orf49,C7orf49	-21638,955,955,955
chr22:42829155-42829549	chr22	+	42829284	42829598	True	NR_027786,NM_145912	chr22,chr22	+,-	SERHL,NFAM1	66986,-883
chr19:40973369-40973574	chr19	+	40973431	40973622	True	NM_000713,NM_020971	chr19,chr19	-,+	BLVRB,SPTBN4	-1706,-356
chr12:113346757-113348649	chr12	+	113346761	113348532	True	NM_001032409,NM_002534,NM_001193521,NM_016816	chr12,chr12,chr12,chr12	+,+,-,+	OAS1,OAS1,RASAL1,OAS1	-2086,-2086,225077,-2086
chr1:248564443-248565765	chr1	+	248564503	248565535	True	NM_030904,NM_001004691	chr1,chr1	+,-	OR2T1,OR2M7	3760,-76633
chr10:112328021-112328298	chr10	+	112328124	112328318	True	NM_005871,NM_005445	chr10,chr10	-,+	SMNDC1,SMC3	-263417,-726
chr2:111877377-111877761	chr2	+	111877382	111877762	True	NM_138624,NR_015395,NM_138623,NM_001204106,NM_207003,NM_006538,NM_207002,NM_001204107,NM_001204113,NM_001204112,NM_001204111,NM_001204110,NM_138627,NM_138626,NM_138625,NM_138622,NM_001204108,NM_001204109,NM_138621	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,-,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+	BCL2L11,LOC541471,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11	728,374980,728,728,728,728,728,728,728,728,728,728,728,728,728,728,728,728,728
chr11:18542295-18544036	chr11	+	18542669	18544075	True	NM_144972,NM_006292	chr11,chr11	+,-	LDHAL6A,TSG101	-65353,4464
chr3:148705693-148706486	chr3	+	148706185	148706503	True	NM_001184721,NM_001184720,NM_004130,NM_003071	chr3,chr3,chr3,chr3	+,+,+,-	GYG1,GYG1,GYG1,HLTF	2691,2691,2691,97888
chr10:125808198-125808463	chr10	+	125808239	125808446	True	NM_015892,NM_001167880	chr10,chr10	-,+	CHST15,LHPP	43535,341894
chr19:50355680-50356178	chr19	+	50355744	50356146	True	NM_017432,NM_007254	chr19,chr19	+,-	PTOV1,PNKP	-1379,14726
chrX:153707808-153708300	chrX	+	153707871	153708072	True	NM_014235,NM_017514,NM_006014	chrX,chrX,chrX	-,+,-	UBL4A,PLXNA3,LAGE3	6919,-21301,-275
chr4:49323254-49323719	chr4	+	49323638	49323696	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-335424,-414823
chr10:5498132-5498711	chr10	+	5498141	5498654	True	NM_017422,NM_005863	chr10,chr10	-,+	CALML5,NET1	42929,-9646
chr12:109488666-109489325	chr12	+	109488799	109488955	True	NM_032663,NM_018711	chr12,chr12	+,-	USP30,SVOP	1424,-29954
chr7:32994888-32996366	chr7	+	32995434	32996283	True	NM_007270,NR_003500	chr7,chr7	+,-	FKBP9,RP9P	721,-12652
chr17:39503259-39504128	chr17	+	39503579	39504147	True	NM_030975,NM_004138	chr17,chr17	+,-	KRTAP9-9,KRT33A	-92005,2961
chr1:226023661-226024014	chr1	+	226023669	226023997	True	NM_000120,NM_014698	chr1,chr1	+,-	EPHX1,TMEM63A	-10718,46483
chr1:93551780-93552167	chr1	+	93552077	93552168	True	NM_001167830,NM_001164392,NM_001164393,NM_007358,NM_001164391	chr1,chr1,chr1,chr1,chr1	-,+,+,+,+	TMED5,MTF2,MTF2,MTF2,MTF2	94129,-7342,-7342,-7342,-7342
chr9:84677448-84677934	chr9	+	84677646	84677936	True	NM_005077,NM_001001670	chr9,chr9	-,+	TLE1,FAM75D1	-374050,-74010
chr11:17299813-17300459	chr11	+	17300009	17300411	True	NM_002645,NM_005013	chr11,chr11	-,+	PIK3C2A,NUCB2	-108655,-1774
chr18:57561973-57563104	chr18	+	57562254	57562969	True	NM_133459,NM_021127	chr18,chr18	-,+	CCBE1,PMAIP1	-197610,4222
chr15:55488905-55489154	chr15	+	55488979	55489107	True	NM_004855,NM_016304	chr15,chr15	+,-	PIGB,RSL24D1	122025,174
chr12:26376563-26376920	chr12	+	26376767	26376973	True	NM_005086,NM_030762	chr12,chr12	+,-	SSPN,BHLHE41	-28315,-98764
chr1:93811455-93811801	chr1	+	93811504	93811820	True	NR_034089,NM_001938	chr1,chr1	-,+	LOC100131564,DR1	-136,-77
chr9:134950777-134951278	chr9	+	134950781	134951229	True	NM_032536,NM_004269	chr9,chr9	+,-	NTNG2,MED27	86104,4074
chr14:75167337-75168342	chr14	+	75167678	75167858	True	NM_015962,NM_001039479	chr14,chr14	+,-	FCF1,KIAA0317	11991,11999
chr1:92352005-92352258	chr1	+	92352088	92352296	True	NM_207189,NM_003243,NR_036634,NM_001195683	chr1,chr1,chr1,chr1	+,-,-,-	BRDT,TGFBR3,TGFBR3,TGFBR3	62631,-252,-252,-252
chr4:9653899-9654546	chr4	+	9654015	9654075	True	NR_031688,NM_000798	chr4,chr4	-,+	MIR548I2,DRD5	-96078,129182
chr9:33447468-33447674	chr9	+	33447573	33447645	True	NM_004925,NM_002504	chr9,chr9	-,+	AQP3,NFX1	1,-157206
chr16:75592580-75593298	chr16	+	75592771	75593288	True	NM_001077418,NM_001077419,NM_001077416,NM_007285	chr16,chr16,chr16,chr16	-,-,-,+	TMEM231,TMEM231,TMEM231,GABARAPL2	-2601,-2601,-2635,6960
chr11:576718-577067	chr11	+	576928	577074	True	NR_029623,NM_020901,NR_026967	chr11,chr11,chr11	-,+,-	MIR210,PHRF1,LOC143666	-8730,-496,-1043
chr14:92221296-92221991	chr14	+	92221319	92221847	True	NM_024764,NM_017437	chr14,chr14	-,+	CATSPERB,CPSF2	-22906,366450
chr15:41049611-41050060	chr15	+	41049618	41049702	True	NM_018145,NM_005258	chr15,chr15	-,+	FAM82A2,GCHFR	-2160,6582
chr7:72632156-72632885	chr7	+	72632251	72632862	True	NR_002164,NR_003186	chr7,chr7	-,+	GTF2IRD2P1,NCF1B	52846,1811
chr7:72632156-72632885	chr7	+	74185956	74186563	False	NM_173537,NM_000265	chr7,chr7	-,+	GTF2IRD2,NCF1	81328,1745
chr7:72632156-72632885	chr7	-	74589567	74590176	False	NM_001003795,NR_003187	chr7,chr7	+,-	GTF2IRD2B,NCF1C	-81271,-1751
chr3:36922403-36922662	chr3	+	36922410	36922548	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	64050,112292
chr12:120808566-120809162	chr12	+	120808573	120809193	True	NM_004373,NM_002442	chr12,chr12	+,-	COX6A1,MSI1	66710,-1615
chrX:100806560-100806963	chrX	+	100806586	100806995	True	NM_001009584,NM_016608	chrX,chrX	-,+	ARMCX6,ARMCX1	66046,-1129
chr2:148602314-148602696	chr2	+	148602395	148602667	True	NM_001190882,NM_001616	chr2,chr2	-,+	ORC4,ACVR2A	175689,-76
chr14:24551387-24551859	chr14	+	24551404	24551554	True	NM_006177,NM_006032	chr14,chr14	-,+	NRL,CPNE6	2328,-10699
chr5:11863607-11865097	chr5	+	11863718	11864963	True	NM_001332,NR_033383	chr5,chr5	-,+	CTNND2,TAG	39198,710005
chr6:43043203-43043588	chr6	+	43043445	43043563	True	NM_002821,NM_015950,NM_152882,NM_152881,NM_152880	chr6,chr6,chr6,chr6,chr6	+,-,+,+,+	PTK7,MRPL2,PTK7,PTK7,PTK7	465,-16203,465,465,465
chr1:32670741-32671028	chr1	+	32670751	32671071	True	NM_001160042,NM_018134,NM_001099434,NM_024296,NM_019118	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	IQCC,IQCC,DCDC2B,CCDC28B,TMEM234	164,164,3623,-4600,16905
chr17:76628405-76629833	chr17	+	76629290	76629685	True	NM_173628,NM_024419	chr17,chr17	-,+	DNAH17,PGS1	-55814,-254606
chr2:180349647-180351389	chr2	+	180349672	180351371	True	NM_001113398,NM_019091	chr2,chr2	-,+	ZNF385B,PLEKHA3	75994,-1004525
chr9:31916270-31916968	chr9	+	31916294	31917008	True	NM_014314,NM_002197	chr9,chr9	-,+	DDX58,ACO1	609364,467592
chr7:22892406-22892906	chr7	+	22892469	22892943	True	NM_019059,NR_003075	chr7,chr7	-,+	TOMM7,SNORD93	-30048,3288
chr12:54019720-54019929	chr12	+	54019804	54019878	True	NM_006856,NM_001130060,NM_134324	chr12,chr12,chr12	-,-,+	ATF7,ATF7,TARBP2	371,371,-124478
chrX:70937528-70937739	chrX	+	70937575	70937725	True	NR_034005,NM_001145140,NM_001145139	chrX,chrX,chrX	+,-,-	FLJ46446,CXorf49,CXorf49B	-20580,460,460
chrX:70937528-70937739	chrX	-	70983549	70983699	False	NR_001568,NM_001145140,NM_001145139	chrX,chrX,chrX	-,+,+	BCYRN1,CXorf49,CXorf49B	-34587,-460,-460
chr19:37581543-37582575	chr19	+	37581991	37582480	True	NM_144689,NM_199126	chr19,chr19	+,-	ZNF420,ZNF585A	-12669,80916
chr7:89748729-89748950	chr7	+	89748804	89748999	True	NR_003551,NM_152706	chr7,chr7	+,-	DPY19L2P4,C7orf62	-141,-1323773
chr7:105220994-105221783	chr7	+	105221135	105221693	True	NR_027068,NM_021930	chr7,chr7	-,+	EFCAB10,RINT1	333,-48655
chr1:173961579-173963080	chr1	+	173961579	173962142	True	NM_172071,NM_001122770	chr1,chr1	-,+	RC3H1,ZBTB37	119,-124138
chr8:15409223-15409888	chr8	+	15409222	15409907	True	NM_139167,NM_178234	chr8,chr8	-,+	SGCZ,TUSC3	-313430,-11680
chr20:44455466-44455899	chr20	+	44455588	44455922	True	NM_003279,NM_033421,NM_001042632,NM_001042633,NM_152897	chr20,chr20,chr20,chr20,chr20	-,+,+,+,+	TNNC2,SNX21,SNX21,SNX21,SNX21	81,6547,6547,6547,6547
chr12:95400277-95402202	chr12	+	95400365	95401848	True	NR_036685,NM_018838	chr12,chr12	+,-	KRT19P2,NDUFA12	-172193,-2854
chr6:97636692-97637291	chr6	+	97636924	97637104	True	NM_052904,NM_198468	chr6,chr6	+,-	KLHL32,MMS22L	-264488,93998
chr5:133561354-133561569	chr5	+	133561420	133561560	True	NR_037434,NM_002715	chr5,chr5	+,-	MIR3661,PPP2CA	-23,440
chr9:140085026-140085489	chr9	+	140085147	140085517	True	NM_003731,NM_013366,NM_001128228	chr9,chr9,chr9	+,-,-	SSNA1,ANAPC2,TPRN	-2144,-2090,9696
chr1:183274122-183275014	chr1	+	183274187	183274766	True	NM_170706,NM_005562	chr1,chr1	-,+	NMNAT2,LAMC2	-178,-119064
chr6:97062026-97063625	chr6	+	97062484	97063560	True	NM_001143957,NM_020482	chr6,chr6	-,+	GPR63,FHL5	221843,-52122
chr17:7199998-7200467	chr17	+	7200042	7200325	True	NM_001143760,NM_015982	chr17,chr17	+,-	EIF5A,YBX2	9992,-2166
chr10:64576549-64576906	chr10	+	64576553	64576862	True	NM_001136179,NM_001136178,NM_032804,NM_001136177,NM_000399	chr10,chr10,chr10,chr10,chr10	-,-,+,-,-	EGR2,EGR2,ADO,EGR2,EGR2	-427,2115,-12089,-427,-427
chr19:4184273-4184478	chr19	+	4184363	4184493	True	NM_016539,NM_133475,NM_001193285	chr19,chr19,chr19	-,+,-	SIRT6,ANKRD24,SIRT6	-1767,-1063,-1767
chr1:808858-809120	chr1	+	808942	809168	True	NR_027055,NR_015368	chr1,chr1	-,+	FAM41C,LOC643837	3064,-45929
chr22:51110441-51110646	chr22	+	51110475	51110665	True	NM_001080420,NM_001085428	chr22,chr22	+,-	SHANK3,ARSA	2404,-43874
chr14:103023003-103023395	chr14	+	103023346	103023440	True	NM_152326,NR_036192	chr14,chr14	-,+	ANKRD9,MIR4309	-47218,-17416
chr22:25393458-25394263	chr22	+	25393574	25393988	True	NM_001001663,NM_001145206	chr22,chr22	-,+	TMEM211,KIAA1671	-58260,29952
chr1:202172533-202173000	chr1	+	202172761	202173035	True	NR_037664,NM_021636,NM_001017403	chr1,chr1,chr1	-,+,+	PTPN7,LGR6,LGR6	-42045,1,-9701
chr17:48546894-48547305	chr17	+	48546969	48547323	True	NM_018346,NM_001267	chr17,chr17	+,-	RSAD1,CHAD	8866,-742
chr2:6635722-6635989	chr2	+	6635779	6635928	True	NM_207315,NM_080657	chr2,chr2	-,+	CMPK2,RSAD2	370058,381867
chr8:41910041-41910364	chr8	+	41910231	41910409	True	NM_001134296,NM_001099412,NM_001099413,NM_006766	chr8,chr8,chr8,chr8	+,-,-,-	AP3M2,MYST3,MYST3,MYST3	100054,-726,-726,-726
chr10:6187910-6188241	chr10	+	6187958	6188280	True	NM_001145443,NR_036111,NM_000417	chr10,chr10,chr10	+,+,-	PFKFB3,MIR3155,IL2RA	-1166,5878,-83625
chr2:23686492-23687150	chr2	+	23686590	23687124	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	462860,-78354
chr4:155664312-155664939	chr4	+	155664656	155664968	True	NM_004744,NM_021870	chr4,chr4	+,-	LRAT,FGG	194,-130754
chr19:17422257-17423003	chr19	+	17422275	17423037	True	NM_024050,NM_024527,NM_023937	chr19,chr19,chr19	+,-,+	DDA1,ABHD8,MRPL34	-1997,-7993,-5857
chr17:79521659-79521952	chr17	+	79521658	79521735	True	NR_033338,NM_012418,NM_025161	chr17,chr17,chr17	-,+,-	C17orf70,FSCN2,C17orf70	-2229,-26293,-2229
chr16:21615094-21615443	chr16	+	21615207	21615477	True	NM_001077180,NM_016025,NM_005849	chr16,chr16,chr16	+,+,-	METTL9,METTL9,IGSF6	-4415,-4415,48545
chrX:54471311-54472045	chrX	+	54471389	54471895	True	NM_004463,NM_058163	chrX,chrX	-,+	FGD1,TSR2	50754,-4590
chr20:62153188-62153433	chr20	+	62153344	62153420	True	NM_024299,NM_005975	chr20,chr20	+,-	PPDPF,PTK6	-1262,15337
chr1:178698944-178699927	chr1	+	178698964	178699821	True	NM_152663,NM_004673	chr1,chr1	+,-	RALGPS2,ANGPTL1	-4723,140451
chr4:25567472-25568793	chr4	+	25567870	25568495	True	NM_015187,NM_001177998	chr4,chr4	-,+	SEL1L3,SLC34A2	296166,88939
chr19:33686361-33686884	chr19	+	33686370	33686574	True	NM_002333,NM_019849	chr19,chr19	+,-	LRP3,SLC7A10	-822,30232
chr1:38099268-38099658	chr1	+	38099340	38099624	True	NM_001038633,NM_018101	chr1,chr1	-,+	RSPO1,CDCA8	917,58534
chr1:227506728-227506934	chr1	+	227506738	227506882	True	NM_014826,NM_178549,NM_003607	chr1,chr1,chr1	-,+,-	CDC42BPA,ZNF678,CDC42BPA	-912,244337,-912
chr9:67293228-67293675	chr9	+	67293245	67293711	True	NM_032250,NR_002817	chr9,chr9	+,-	ANKRD20A1,AQP7P1	633049,-3753
chr9:67293228-67293675	chr9	-	42853685	42854151	False	NR_026759,NR_026558	chr9,chr9	-,+	FAM95B1,AQP7P3	179211,4000
chr9:67293228-67293675	chr9	-	67026672	67027138	False	NR_024443,NR_024496	chr9,chr9	-,+	LOC100133920,LOC442421	3894,-532454
chr9:67293228-67293675	chr9	+	69655197	69655663	False	NM_001085457,NR_024443	chr9,chr9	-,+	CBWD6,LOC100133920	-392604,-3887
chr20:31404593-31406431	chr20	+	31404812	31406281	True	NM_012325,NM_053041	chr20,chr20	+,-	MAPRE1,COMMD7	1417,-72998
chr9:33244794-33245073	chr9	+	33244830	33245115	True	NM_014471,NM_001172415	chr9,chr9	+,-	SPINK4,BAG1	-4692,19695
chr15:33605248-33606969	chr15	+	33605512	33606828	True	NM_001036,NM_001103184	chr15,chr15	+,-	RYR3,FMN1	-2386,-245427
chr10:71175314-71175639	chr10	+	71175375	71175635	True	NM_001057,NM_012339	chr10,chr10	-,+	TACR2,TSPAN15	1089,35590
chr8:12671479-12672645	chr8	+	12671529	12672585	True	NR_015383,NR_037495	chr8,chr8	-,+	LOC340357,MIR3926-2	-2619,-86848
chr15:75041349-75042360	chr15	+	75041351	75042107	True	NM_000499,NM_000761	chr15,chr15	-,+	CYP1A1,CYP1A2	-23474,-218
chr15:25486536-25486847	chr15	+	25486570	25486866	True	NR_003344,NR_003358,NR_003359,NM_130838,NR_003353,NR_003352,NR_003351,NR_003350,NR_003357,NR_003356,NR_003355,NR_003354,NR_003302,NR_003303,NR_003349	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,-,+,+,+,+,+,+,+,+,+,+,+	SNORD115-29,SNORD115-43,SNORD115-44,UBE3A,SNORD115-38,SNORD115-37,SNORD115-36,SNORD115-35,SNORD115-42,SNORD115-41,SNORD115-40,SNORD115-39,SNORD115-10,SNORD115-11,SNORD115-34	-5389,-5389,9139,163837,-1636,-3488,-5389,-7227,5625,3758,1894,26,5625,-5389,-9087
chr7:99702119-99702878	chr7	+	99702518	99702905	True	NM_004722,NM_182776,NM_005916	chr7,chr7,chr7	+,-,-	AP4M1,MCM7,MCM7	-3439,-4138,-3091
chr17:42977587-42979017	chr17	+	42977714	42978829	True	NM_001142605,NM_213607,NM_004247	chr17,chr17,chr17	-,+,-	EFTUD2,CCDC103,EFTUD2	-721,-611,-721
chr10:11785865-11787621	chr10	+	11785903	11787669	True	NM_014688,NM_024693	chr10,chr10	-,+	USP6NL,ECHDC3	-132224,-1600
chr8:145652536-145653264	chr8	+	145652760	145653296	True	NM_145754,NM_183057,NM_016208	chr8,chr8,chr8	+,-,-	KIFC2,VPS28,VPS28	38441,681,681
chr1:86174737-86175151	chr1	+	86174786	86175183	True	NM_001554,NM_001170670,NM_017953	chr1,chr1,chr1	+,-,-	CYR61,ZNHIT6,ZNHIT6	-128398,-670,-670
chr14:106442794-106443219	chr14	+	106442973	106443215	True	NR_026800	chr14	+	KIAA0125	-59186
chr3:142374282-142374629	chr3	+	142374582	142374678	True	NM_001184,NM_001172312	chr3,chr3	-,+	ATR,PLS1	-76914,1060
chr6:3121691-3122247	chr6	+	3121840	3122236	True	NR_026648,NR_026649,NR_026650,NM_001069,NM_004332	chr6,chr6,chr6,chr6,chr6	+,+,+,-,+	BPHL,BPHL,BPHL,TUBB2A,BPHL	-2972,-2972,-2972,35605,-2972
chr17:16691334-16691653	chr17	+	16691405	16691493	True	NR_026810,NR_029392,NR_003190	chr17,chr17,chr17	+,-,+	FAM106C,KRT16P2,LOC162632	563,44704,-1251
chr1:47488999-47489280	chr1	+	47488998	47489292	True	NM_000778,NM_178033	chr1,chr1	-,+	CYP4A11,CYP4X1	-81842,6
chr3:45735935-45736911	chr3	+	45736048	45736726	True	NM_014016,NR_033947	chr3,chr3	+,-	SACM1L,LOC644714	-5345,-5674
chr20:38805063-38805680	chr20	+	38805082	38805714	True	NM_003286,NM_005461	chr20,chr20	+,-	TOP1,MAFB	851747,512212
chr18:54324547-54325426	chr18	+	54324771	54325250	True	NM_052834,NM_015285,NR_024546	chr18,chr18,chr18	+,+,-	WDR7,WDR7,TXNL1	-6207,-6207,-18851
chr10:94051383-94051646	chr10	+	94051449	94051662	True	NM_017824,NM_014912	chr10,chr10	+,-	MARCH5,CPEB3	-580,-574
chr15:90792946-90794436	chr15	+	90793071	90794335	True	NM_001029964,NM_006384	chr15,chr15	+,-	TTLL13,CIB1	-358,-15792
chr19:51387504-51389066	chr19	+	51387704	51389084	True	NR_002948,NM_005551	chr19,chr19	-,+	KLKP1,KLK2	10620,-11067
chr16:19119633-19120541	chr16	+	19119650	19120102	True	NM_001034841,NM_015092,NR_028028	chr16,chr16,chr16	+,-,+	ITPRIPL2,SMG1,ITPRIPL2	5151,-181924,5151
chr9:114424663-114425671	chr9	+	114424789	114425640	True	NM_001017998,NR_034087,NM_001198664	chr9,chr9,chr9	+,-,+	GNG10,C9orf29,GNG10	-989,-48956,-989
chr2:128404344-128404591	chr2	+	128404353	128404555	True	NM_005291,NR_027823,NM_001161416,NM_001161417,NM_001161415	chr2,chr2,chr2,chr2,chr2	+,-,+,+,+	GPR17,LIMS2,GPR17,GPR17,GPR17	-965,1252,-965,-965,-965
chr11:82786283-82786538	chr11	+	82786504	82786571	True	NM_015885,NM_014488	chr11,chr11	+,-	PCF11,RAB30	81565,-3620
chr14:61186557-61188174	chr14	+	61186569	61187821	True	NM_017420,NM_001177963	chr14,chr14	-,+	SIX4,MNAT1	3081,13637
chr1:23493772-23494238	chr1	+	23493782	23494238	True	NM_033631,NM_001142546,NR_036057	chr1,chr1,chr1	-,-,+	LUZP1,LUZP1,MIR3115	1163,1163,-123035
chr15:57590843-57591056	chr15	+	57590885	57591039	True	NR_015419,NR_024433	chr15,chr15	-,+	LOC145783,LOC283663	-380188,1523
chr19:11668968-11669811	chr19	+	11668981	11669809	True	NM_032377,NM_001299	chr19,chr19	-,+	ELOF1,CNN1	292,-19460
chr3:140660475-140660746	chr3	+	140660509	140660627	True	NM_001104647,NM_001178140,NM_018155	chr3,chr3,chr3	+,-,+	SLC25A36,TFDP2,SLC25A36	34,1058652,34
chr11:126228230-126229545	chr11	+	126228423	126229530	True	NM_006278,NR_033839	chr11,chr11	+,-	ST3GAL4,FLJ39051	-2378,-2941
chr11:63537928-63539677	chr11	+	63537942	63539302	True	NM_138471,NM_001144936	chr11,chr11	+,-	C11orf84,C11orf95	41620,-1829
chr6:151562632-151563366	chr6	+	151562643	151563420	True	NM_005100,NM_020861	chr6,chr6	+,-	AKAP12,ZBTB2	-1560,149312
chr6:56817291-56818914	chr6	+	56817576	56818824	True	NM_152731,NM_183227	chr6,chr6	+,-	BEND6,RAB23	948,267483
chr8:7933816-7934321	chr8	+	7934282	7934358	True	NR_031689,NR_027424	chr8,chr8	-,+	MIR548I3,FAM66E	12303,-121798
chr8:7933816-7934321	chr8	-	12447695	12447771	False	NR_037492,NR_037495	chr8,chr8	-,+	MIR3926-1,MIR3926-2	137092,136974
chr14:75746279-75746531	chr14	+	75746278	75746504	True	NM_006827,NM_005252	chr14,chr14	-,+	TMED10,FOS	-102929,-848
chr12:105502570-105502836	chr12	+	105502569	105502694	True	NR_027752,NM_015275	chr12,chr12	-,+	ALDH1L2,KIAA1033	-24228,-1139
chr9:131843745-131844038	chr9	+	131843747	131844087	True	NM_000755,NM_020438,NM_001135917	chr9,chr9,chr9	-,+,+	CRAT,DOLPP1,DOLPP1	29033,-415,-415
chr6:135265418-135266678	chr6	+	135265516	135266719	True	NM_170771,NM_022568,NM_001193480,NM_005375	chr6,chr6,chr6,chr6	-,-,-,+	ALDH8A1,ALDH8A1,ALDH8A1,MYB	4592,4592,4592,235733
chr19:40894395-40894943	chr19	+	40894514	40894682	True	NM_012268,NM_144685	chr19,chr19	+,-	PLD3,HIPK4	-40233,1462
chr4:71772016-71773569	chr4	+	71772222	71773228	True	NM_002092,NM_173468	chr4,chr4	-,+	GRSF1,MOBKL1A	-66595,-4210
chr22:23875667-23877014	chr22	+	23875799	23876949	True	NM_153615,NM_020070	chr22,chr22	+,-	RGL4,IGLL1	156098,45596
chr19:36425438-36426174	chr19	+	36425618	36426142	True	NR_033390,NM_024509	chr19,chr19	-,+	TYROBP,LRFN3	-26407,1879
chrX:15484343-15484611	chrX	+	15484436	15484509	True	NR_037859,NM_203281	chrX,chrX	-,+	PIR-FIGF,BMX	24974,34390
chr2:99865805-99866996	chr2	+	99866299	99866737	True	NR_028356,NM_175735	chr2,chr2	+,-	MRPL30,LYG2	-68808,4897
chr11:6341906-6342443	chr11	+	6341966	6342380	True	NM_176875,NM_145040	chr11,chr11	+,-	CCKBR,PRKCDBP	-61051,-226
chr3:173116047-173116599	chr3	+	173116104	173116649	True	NM_014932,NM_031955	chr3,chr3	+,-	NLGN1,SPATA16	-29,-257046
chr19:1323926-1324171	chr19	+	1324018	1324219	True	NR_027271,NM_032853	chr19,chr19	-,+	C19orf23,MUM1	-53759,30756
chr17:40018950-40019607	chr17	+	40019096	40019349	True	NM_018143,NM_152467	chr17,chr17	-,+	KLHL11,KLHL10	2331,-25104
chr20:10369734-10370078	chr20	+	10369734	10369876	True	NM_001009608,NM_018848	chr20,chr20	+,-	C20orf94,MKKS	46074,42744
chr8:16855309-16857122	chr8	+	16855637	16856782	True	NM_181723,NM_019851	chr8,chr8	+,-	EFHA2,FGF20	27964,2955
chr1:174124092-174124422	chr1	+	174124193	174124253	True	NM_172071,NM_014857	chr1,chr1	-,+	RC3H1,RABGAP1L	-161983,4380
chr4:88139662-88139977	chr4	+	88139661	88139892	True	NM_020803,NM_024047	chr4,chr4	-,+	KLHL8,NUDT9	1841,203842
chr17:7388225-7388512	chr17	+	7388237	7388495	True	NM_000937,NM_020899,NM_001128833,NM_001102614	chr17,chr17,chr17,chr17	+,-,-,+	POLR2A,ZBTB4,ZBTB4,AMAC1L3	-590,-669,-5293,-3567
chr12:49242826-49243159	chr12	+	49242949	49243132	True	NM_004818,NM_000725	chr12,chr12	-,+	DDX23,CACNB3	2880,-30491
chr19:55235990-55236931	chr19	+	55236281	55236893	True	NM_153443,NM_001127255	chr19,chr19	+,-	KIR3DL3,NLRP7	-348,222030
chr8:82599220-82599873	chr8	+	82599384	82599688	True	NM_152284,NM_005536,NM_001144879,NM_001144878,NM_001010893	chr8,chr8,chr8,chr8,chr8	+,-,-,-,-	CHMP4C,IMPA1,IMPA1,IMPA1,SLC10A5	44999,-795,-795,-795,7571
chr10:77163810-77164098	chr10	+	77163814	77164062	True	NM_032772,NR_024422,NR_024421	chr10,chr10,chr10	-,+,+	ZNF503,NCRNA00245,NCRNA00245	-2301,-356,-2584
chr2:229217430-229217861	chr2	+	229217470	229217909	True	NM_178821,NM_030623	chr2,chr2	+,-	WDR69,SPHKAP	-481194,-171109
chr19:1066400-1066637	chr19	+	1066478	1066678	True	NM_002695,NM_012292	chr19,chr19	-,+	POLR2E,HMHA1	28763,495
chr1:89825259-89826918	chr1	+	89825259	89826913	True	NM_052942,NM_198460	chr1,chr1	-,+	GBP5,GBP6	-86715,2522
chr22:18923205-18923481	chr22	+	18923215	18923483	True	NM_001195226,NM_005675,NM_016335	chr22,chr22,chr22	-,+,-	PRODH,DGCR6,PRODH	531,-29530,633
chr19:38210640-38210867	chr19	+	38210648	38210906	True	NM_001172226,NM_032689,NM_001172677	chr19,chr19,chr19	+,-,-	ZNF540,ZNF607,ZNF607	-124968,-33,-559
chr6:13329904-13330329	chr6	+	13329919	13330137	True	NM_001143966,NM_001143964,NM_001143965,NM_016495,NM_031244	chr6,chr6,chr6,chr6,chr6	-,-,-,-,+	TBC1D7,TBC1D7,TBC1D7,TBC1D7,SIRT5	-1132,-1132,-1132,-1132,244654
chr6:13329904-13330329	chr6	-	13331862	13331922	False	NM_001143966,NM_001143964,NM_001143965,NM_016495,NM_031244	chr6,chr6,chr6,chr6,chr6	-,-,-,-,+	TBC1D7,TBC1D7,TBC1D7,TBC1D7,SIRT5	-3075,-3075,-3075,-3075,242869
chr5:64047070-64048069	chr5	+	64047069	64047818	True	NM_173829,NM_005869	chr5,chr5	-,+	SREK1IP1,CWC27	16739,16936
chr19:1238475-1238841	chr19	+	1238590	1238840	True	NM_001001975,NM_177401,NM_001687,NM_152769	chr19,chr19,chr19,chr19	+,+,+,-	ATP5D,MIDN,ATP5D,C19orf26	2908,9711,2908,-600
chr16:4466739-4467008	chr16	+	4466879	4466969	True	NM_005147,NM_001135110,NM_024535,NM_001201473,NM_001201472,NM_001201479	chr16,chr16,chr16,chr16,chr16,chr16	+,+,-,-,-,-	DNAJA3,DNAJA3,CORO7,CORO7,CORO7,CORO7-PAM16	8888,8888,43,43,43,43
chr5:98259410-98259679	chr5	+	98259431	98259587	True	NR_036530,NM_001270	chr5,chr5	+,-	LOC100289230,CHD1	5250,2709
chr6:14113465-14115067	chr6	+	14113601	14114693	True	NM_001031713,NM_001040280,NM_004233	chr6,chr6,chr6	-,+,+	CCDC90A,CD83,CD83	-298812,3171,3171
chr1:15929915-15930339	chr1	+	15930008	15930376	True	NM_032341,NM_024758	chr1,chr1	+,-	DDI2,AGMAT	13576,-18403
chr17:2617129-2617848	chr17	+	2617132	2617821	True	NM_015229,NM_001100398	chr17,chr17	-,+	KIAA0664,RAP1GAP2	-2205,81910
chr9:103187834-103189368	chr9	+	103188055	103189182	True	NM_001198806,NM_001198805,NM_017746,NM_001198807,NM_080655	chr9,chr9,chr9,chr9,chr9	+,+,-,+,+	C9orf30,C9orf30,TEX10,C9orf30,C9orf30	2613,528,-72796,312,312
chr6:21593879-21594682	chr6	+	21594017	21594443	True	NM_003107,NR_034143	chr6,chr6	+,-	SOX4,LOC729177	-96,553029
chr22:20103514-20103724	chr22	+	20103551	20103693	True	NM_182984,NM_022727,NM_002882	chr22,chr22,chr22	-,-,+	TRMT2A,TRMT2A,RANBP1	1125,1125,1330
chr7:130334857-130336447	chr7	+	130334977	130335927	True	NM_012133,NR_029899	chr7,chr7	-,+	COPG2,MIR335	17728,-199076
chr19:11617973-11618358	chr19	+	11618044	11618376	True	NM_138783,NM_001299	chr19,chr19	-,+	ZNF653,CNN1	-1306,31202
chr1:187195687-187197152	chr1	+	187195687	187196958	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-546128,-397706
chr12:104681134-104682394	chr12	+	104681193	104682433	True	NM_006166,NM_003330,NM_182743,NM_182729,NM_182742	chr12,chr12,chr12,chr12,chr12	-,+,+,+,+	NFYB,TXNRD1,TXNRD1,TXNRD1,TXNRD1	-149153,-524,-524,-524,-524
chr18:22051493-22052100	chr18	+	22051816	22051964	True	NM_021624,NM_080597	chr18,chr18	+,-	HRH4,OSBPL1A	-11275,-74026
chr19:41869123-41869901	chr19	+	41869215	41869892	True	NM_030578,NM_001098825,NM_000660	chr19,chr19,chr19	-,+,-	B9D2,TMEM91,TGFB1	236,-12,-9384
chr3:18465175-18465942	chr3	+	18465474	18465991	True	NM_002971,NM_144633,NM_001195470	chr3,chr3,chr3	-,+,-	SATB1,KCNH8,SATB1	888,724025,888
chr21:31118142-31118877	chr21	+	31118450	31118908	True	NM_175611,NR_027021	chr21,chr21	-,+	GRIK1,GRIK1-AS1	193440,1585
chr12:10659262-10659544	chr12	+	10659333	10659533	True	NM_213658,NM_007334	chr12,chr12	-,+	KLRC1,KLRD1	-52118,-198967
chr10:105611247-105611726	chr10	+	105611275	105611741	True	NM_014631,NM_014720	chr10,chr10	-,+	SH3PXD2A,SLK	3473,115728
chr19:36604073-36604358	chr19	+	36604075	36604397	True	NM_006233,NM_001281	chr19,chr19	-,+	POLR2I,TBCB	1859,1490
chr19:45201990-45202940	chr19	+	45202029	45202705	True	NM_001039213,NR_027754	chr19,chr19	+,-	CEACAM16,CEACAM22P	-23,-141879
chr11:67482461-67483036	chr11	+	67482709	67482789	True	NM_007103,NM_001031615	chr11,chr11	+,-	NDUFV1,ALDH3B2	-108437,-34024
chr20:5586278-5587806	chr20	+	5586438	5587656	True	NM_019593,NR_029405	chr20,chr20	-,+	GPCPD1,LOC643406	4067,-134653
chr20:55041278-55041681	chr20	+	55041349	55041705	True	NM_080615,NM_016407	chr20,chr20	-,+	GCNT7,C20orf43	59326,1941
chr5:177557270-177557555	chr5	+	177557296	177557516	True	NM_022762,NM_001034833	chr5,chr5	+,-	RMND5B,NHP2	511,23495
chr5:177557270-177557555	chr5	-	177558427	177558477	False	NM_022762,NM_001034833	chr5,chr5	+,-	RMND5B,NHP2	-450,22534
chr12:46661130-46661338	chr12	+	46661232	46661324	True	NM_001077484,NM_030674,NM_152641	chr12,chr12,chr12	-,-,+	SLC38A1,SLC38A1,ARID2	1934,1934,-537663
chr17:19881914-19883367	chr17	+	19882052	19883320	True	NM_007202,NM_152904	chr17,chr17	-,+	AKAP10,SPECC1	-923,107014
chr14:100706921-100708031	chr14	+	100707081	100708035	True	NM_003403,NM_001039355	chr14,chr14	+,-	YY1,SLC25A29	-2034,64882
chr17:80655338-80655581	chr17	+	80655347	80655497	True	NM_006822,NM_024619	chr17,chr17	-,+	RAB40B,FN3KRP	1151,19084
chr14:24899435-24899661	chr14	+	24899647	24899709	True	NM_001039771,NM_015299	chr14,chr14	-,+	CBLN3,KHNYN	-916,-557
chr12:3185861-3186185	chr12	+	3185906	3186054	True	NM_202003,NM_006675,NM_001168320	chr12,chr12,chr12	-,+,+	FOXM1,TSPAN9,TSPAN9	-199603,466,466
chr4:10412475-10414075	chr4	+	10412617	10413999	True	NM_000798,NM_053042	chr4,chr4	+,-	DRD5,ZNF518B	-629410,45084
chr1:48267238-48267711	chr1	+	48267262	48267748	True	NM_001194986,NM_004474	chr1,chr1	-,+	LOC388630,FOXD2	194864,-365624
chr5:52301333-52301857	chr5	+	52301538	52301754	True	NM_002203,NM_004531	chr5,chr5	+,-	ITGA2,MOCS2	-16443,103621
chr14:39573596-39574076	chr14	+	39573736	39573946	True	NM_006364,NM_003616,NM_001009183,NM_001009182	chr14,chr14,chr14,chr14	-,+,+,+	SEC23A,SIP1,SIP1,SIP1	-1299,9541,9541,9541
chr16:70487165-70488227	chr16	+	70487403	70488257	True	NM_145059,NM_006927	chr16,chr16	+,-	FUK,ST3GAL2	240,-14412
chr9:131842249-131842817	chr9	+	131842455	131842754	True	NM_000755,NM_020438,NM_001135917	chr9,chr9,chr9	-,+,+	CRAT,DOLPP1,DOLPP1	30367,628,628
chr14:71785728-71786865	chr14	+	71785814	71786825	True	NR_001276,NM_033141	chr14,chr14	+,-	SNORD56B,MAP3K9	78228,-509926
chr1:225127308-225128395	chr1	+	225127648	225128133	True	NM_144989,NM_002296	chr1,chr1	+,-	DNAH14,LBR	-10345,487747
chr11:76592266-76593207	chr11	+	76592553	76593023	True	NM_018367,NR_024042	chr11,chr11	+,-	ACER3,GUCY2E	-20696,-159720
chr4:83933949-83934156	chr4	+	83934006	83934200	True	NM_194282,NM_001115008,NM_001115007,NM_016129	chr4,chr4,chr4,chr4	-,-,-,+	LIN54,LIN54,LIN54,COPS4	-2024,-2024,26,22038
chr1:209864641-209865577	chr1	+	209864690	209865608	True	NM_181755,NM_000228	chr1,chr1	+,-	HSD11B1,LAMB3	-5204,-38870
chr7:154002278-154002551	chr7	+	154002293	154002519	True	NM_001936,NM_007349	chr7,chr7	+,-	DPP6,PAXIP1	3,792213
chr2:65456068-65456744	chr2	+	65456325	65456618	True	NM_001005386,NM_005722,NM_015543	chr2,chr2,chr2	+,+,-	ACTR2,ACTR2,RAB1A	-1557,-1557,-98890
chr2:113832854-113833316	chr2	+	113832876	113833356	True	NM_032556,NM_173161,NM_173178	chr2,chr2,chr2	+,+,-	IL1F10,IL1F10,IL1F8	-3032,-7380,-22436
chr10:43894688-43896452	chr10	+	43894844	43896240	True	NM_004966,NM_001098208,NM_173160,NM_001098204,NM_001098205,NM_001098206,NM_001098207	chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,-,+,-,-,-,-	HNRNPF,HNRNPF,FXYD4,HNRNPF,HNRNPF,HNRNPF,HNRNPF	8477,-2565,-27803,8517,8153,7120,-2050
chr11:73501520-73502021	chr11	+	73501858	73501925	True	NM_198896,NM_016055	chr11,chr11	-,+	RAB6A,MRPL48	-29657,-2992
chr2:234295712-234296189	chr2	+	234295716	234296168	True	NM_003648,NM_018218	chr2,chr2	+,-	DGKD,USP40	631,178118
chr11:108366426-108368272	chr11	+	108366788	108368273	True	NM_153705,NM_004398	chr11,chr11	-,+	KDELC2,DDX10	936,167542
chr2:217563132-217564839	chr2	+	217563161	217564838	True	NM_000597,NM_000599	chr2,chr2	+,-	IGFBP2,IGFBP5	-65097,-2889
chr5:1225112-1225326	chr5	+	1225111	1225268	True	NM_182632,NM_001193376	chr5,chr5	+,-	SLC6A18,TERT	201,69951
chr1:9130580-9131184	chr1	+	9130674	9131054	True	NM_001215,NM_003039,NM_001135585	chr1,chr1,chr1	+,-,-	CA6,SLC2A5,SLC2A5	-124810,-787,-787
chr2:182354787-182355984	chr2	+	182355259	182355988	True	NM_001030311,NM_000885	chr2,chr2	-,+	CERKL,ITGA4	165903,-33697
chr12:6492515-6492901	chr12	+	6492515	6492891	True	NM_002342,NM_001159576,NM_001159575,NM_001038	chr12,chr12,chr12,chr12	+,-,-,-	LTBR,SCNN1A,SCNN1A,SCNN1A	465,-8125,-5992,-7610
chr3:160169721-160170247	chr3	+	160170031	160170281	True	NR_029525,NM_173084	chr3,chr3	+,-	MIR16-2,TRIM59	-47555,-2405
chr13:45991675-45992087	chr13	+	45991687	45992085	True	NM_001204476,NM_001010875	chr13,chr13	+,-	COG3,SLC25A30	46944,481
chr9:97089677-97091096	chr9	+	97089683	97091061	True	NM_017561,NR_033937	chr9,chr9	-,+	FAM22F,LOC100132077	-85,3696
chr9:97089677-97091096	chr9	-	99691150	99692524	False	NM_001170741,NM_001045477,NM_001001662	chr9,chr9,chr9	+,+,-	FAM22G,FAM22G,ZNF782	85,85,-74761
chr15:25457070-25457655	chr15	+	25457111	25457581	True	NR_003315,NR_003314,NR_003313,NR_003312,NR_003311,NR_003310,NR_003497,NR_003496,NR_022010,NR_003309,NM_130838,NR_003342,NR_003343,NR_003307,NR_003495	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,+,-,+,+,+,+	SNORD115-23,SNORD115-22,SNORD115-21,SNORD115-20,SNORD115-19,SNORD115-18,HBII-52-28,HBII-52-27,PAR4,SNORD115-17,UBE3A,SNORD115-25,SNORD115-26,SNORD115-15,SNORD115-24	-219,-2097,-5753,-5753,-7658,-7658,9919,8068,-323,-7658,193122,3106,6182,-5753,1224
chr22:42487107-42487340	chr22	+	42487121	42487337	True	NM_002490,NR_034118	chr22,chr22	-,+	NDUFA6,LOC100132273	-233,-235
chr14:98637900-98638533	chr14	+	98637918	98638458	True	NR_015430,NM_182560	chr14,chr14	-,+	C14orf64,C14orf177	-193457,539491
chr1:21880092-21881744	chr1	+	21880218	21880816	True	NM_001177520,NM_001145658	chr1,chr1	+,-	ALPL,RAP1GAP	-44411,97582
chr7:119914767-119915061	chr7	+	119914864	119915100	True	NM_012281,NM_012338	chr7,chr7	+,-	KCND2,TSPAN12	-1193,583127
chr16:71926003-71926260	chr16	+	71926109	71926175	True	NM_014761,NM_017530,NM_001201554,NM_001201556,NM_001201552,NM_001201553	chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,-,-,-	KIAA0174,ZNF821,ZNF821,ZNF821,ZNF821,ZNF821	3270,-8665,-8016,-8016,-8016,-8665
chr11:3527545-3529193	chr11	+	3528114	3529136	True	NM_007152,NR_002720	chr11,chr11	-,+	ZNF195,TRPC2	-127666,118577
chr14:101459589-101460874	chr14	+	101459597	101460650	True	NR_003224,NR_003223,NR_003222,NR_003221,NR_003220,NR_003218,NR_003219,NR_003216,NM_001134888,NR_003217	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,+,+,+,+,+,-,+	SNORD114-31,SNORD114-30,SNORD114-29,SNORD114-28,SNORD114-27,SNORD114-25,SNORD114-26,SNORD114-23,RTL1,SNORD114-24	-82,-1399,-3227,-4188,-5157,-7261,-6272,-9442,-108413,-8541
chr8:145025758-145026183	chr8	+	145025798	145026220	True	NM_000837,NR_030383,NM_201379,NM_201381,NM_201380,NM_201383,NM_201382	chr8,chr8,chr8,chr8,chr8,chr8,chr8	+,-,-,-,-,-,-	GRINA,MIR661,PLEC,PLEC,PLEC,PLEC,PLEC	38005,-6351,1918,-6893,-754,-9106,-7688
chr17:55926747-55927266	chr17	+	55926755	55927183	True	NM_016070,NM_080677	chr17,chr17	-,+	MRPS23,DYNLL2	300,233596
chr5:113715067-113716447	chr5	+	113715765	113716454	True	NM_018700,NM_021614	chr5,chr5	-,+	TRIM36,KCNN2	799846,-17808
chr6:10676084-10677855	chr6	+	10676566	10677134	True	NM_001145020,NM_017906	chr6,chr6	-,+	C6orf52,PAK1IP1	17755,18053
chr10:114058552-114059286	chr10	+	114058567	114059290	True	NR_028134,NM_058222	chr10,chr10	-,+	GUCY2GP,TECTB	57113,-15125
chr5:34183594-34184538	chr5	+	34184096	34184163	True	NM_016568,NR_037951	chr5,chr5	+,-	RXFP3,C1QTNF3-AMACR	-247669,-59463
chr13:45151932-45152135	chr13	+	45151971	45152111	True	NM_001010897,NM_183422	chr13,chr13	+,-	SERP2,TSC22D1	-204044,-1270
chr4:86396155-86396373	chr4	+	86396166	86396354	True	NM_001025616,NM_014991	chr4,chr4	+,-	ARHGAP24,WDFY3	47,-508622
chrX:148855367-148855658	chrX	+	148855480	148855606	True	NM_016153,NM_032508,NM_005365,NM_001164415,NM_001080790	chrX,chrX,chrX,chrX,chrX	+,-,+,+,+	HSFX1,TMEM185A,MAGEA9,HSFX2,MAGEA9B	119,-141993,7993,119,7986
chrX:148855367-148855658	chrX	-	148677093	148677219	False	NM_016153,NM_005365,NM_001164415,NM_001171909,NM_001080790	chrX,chrX,chrX,chrX,chrX	-,-,-,+,-	HSFX1,MAGEA9,HSFX2,CXorf40A,MAGEA9B	-119,-7984,-119,-51078,-7977
chr17:80694950-80695290	chr17	+	80695048	80695172	True	NM_022158,NM_006822	chr17,chr17	+,-	FN3K,RAB40B	-1647,-38450
chr3:44297066-44298540	chr3	+	44297501	44298390	True	NM_181489,NM_001145030	chr3,chr3	-,+	ZNF445,C3orf77	220822,-14186
chr1:16330877-16332850	chr1	+	16331308	16332498	True	NM_014424,NM_178840	chr1,chr1	-,+	HSPB7,C1orf64	12837,-628
chr15:75121494-75122220	chr15	+	75121535	75122166	True	NM_001030005,NM_001099436	chr15,chr15	+,-	CPLX3,ULK3	-2636,13436
chr2:26534996-26536297	chr2	+	26535355	26536041	True	NM_001145168,NM_001145169,NM_033505	chr2,chr2,chr2	-,-,+	GPR113,GPR113,EPT1	5926,5979,32912
chr14:101293566-101293784	chr14	+	101293620	101293783	True	NR_003531,NR_003530,NR_033360,NR_002766,NR_033358,NR_033359,NM_001134888	chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,+,+,+,-	MEG3,MEG3,MEG3,MEG3,MEG3,MEG3,RTL1	-1226,-1226,-1226,-1226,-1226,-1226,57451
chr1:167487489-167487755	chr1	+	167487497	167487801	True	NM_052862,NM_000734,NM_198053	chr1,chr1,chr1	+,-,-	RCSD1,CD247,CD247	111672,96,96
chr7:6617262-6617554	chr7	+	6617401	6617466	True	NM_001145118,NM_001134387,NM_001134388,NM_001134389,NM_018106	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	GRID2IP,ZDHHC4,ZDHHC4,ZDHHC4,ZDHHC4	-26334,-387,-387,-387,-387
chr9:67683180-67683419	chr9	+	67683189	67683267	True	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	110972,243493
chr9:67683180-67683419	chr9	+	44761951	44762011	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	228224,-1131221
chr9:67683180-67683419	chr9	-	47166191	47166269	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-3535461,-478676
chr1:13119077-13120182	chr1	+	13119806	13119902	True	NM_001100631,NM_001013407	chr1,chr1	+,-	PRAMEF22,PRAMEF5	-84315,-2055
chr1:13119077-13120182	chr1	+	13009475	13009571	False	NM_001100631,NM_001010889	chr1,chr1	+,-	PRAMEF22,PRAMEF6	25971,-2069
chr1:13119077-13120182	chr1	-	13357667	13357763	False	NM_001013692,NM_001010889,NM_001013407	chr1,chr1,chr1	-,+,+	PRAMEF3,PRAMEF6,PRAMEF5	-25975,2069,2055
chr16:69761722-69763229	chr16	+	69761948	69763145	True	NM_001025433,NM_000903,NM_199423,NM_001025434	chr16,chr16,chr16,chr16	-,-,+,-	NQO1,NQO1,WWP2,NQO1	-1415,-1415,33128,-1415
chr15:72694397-72695880	chr15	+	72695087	72695904	True	NM_001080462,NM_000520	chr15,chr15	+,-	TMEM202,HEXA	-4470,-26567
chr3:51737794-51739739	chr3	+	51738274	51739558	True	NM_001143833,NM_001130063,NM_000839	chr3,chr3,chr3	-,+,+	IQCF6,GRM2,GRM2	73695,1522,1522
chr1:16135026-16135901	chr1	+	16135364	16135804	True	NM_001089591,NM_015001	chr1,chr1	-,+	UQCRHL,SPEN	-1170,38554
chr10:27752572-27754395	chr10	+	27752638	27754118	True	NM_021252,NM_001034842	chr10,chr10	+,-	RAB18,PTCHD3	39130,-49341
chr16:14417045-14417561	chr16	+	14417130	14417542	True	NR_029854,NM_001134477	chr16,chr16	+,-	MIR365-1,PARN	-14039,306628
chr1:32760408-32761822	chr1	+	32761100	32761870	True	NM_023009,NM_004964	chr1,chr1	-,+	MARCKSL1,HDAC1	40014,-3444
chr5:53700458-53701066	chr5	+	53700531	53700872	True	NM_006308,NM_019087	chr5,chr5	+,-	HSPB3,ARL15	50558,-94128
chr10:75417837-75418199	chr10	+	75417963	75418073	True	NM_024875,NM_001114133,NM_004922	chr10,chr10,chr10	-,-,+	SYNPO2L,SYNPO2L,SEC24C	-7176,-2131,86057
chr19:17529492-17530496	chr19	+	17529629	17530353	True	NM_004335,NM_138401	chr19,chr19	-,+	BST2,FAM125A	-13245,558
chr19:3499081-3499486	chr19	+	3499298	3499484	True	NM_031304,NM_016263,NM_001145165	chr19,chr19,chr19	-,+,-	DOHH,FZR1,DOHH	1187,6810,1504
chr1:1344730-1346037	chr1	+	1345060	1345177	True	NM_017971,NR_015434	chr1,chr1	-,+	MRPL20,LOC148413	-2367,-10202
chr9:84555441-84556365	chr9	+	84555503	84556401	True	NM_005077,NM_207416	chr9,chr9	-,+	TLE1,FAM75D3	-251907,2013
chr9:84555441-84556365	chr9	+	84540431	84541329	False	NM_001145197,NM_005077	chr9,chr9	+,-	FAM75D4,TLE1	2013,-236835
chr4:156776579-156777050	chr4	+	156776579	156777073	True	NM_005651,NM_017419	chr4,chr4	+,-	TDO2,ACCN5	47773,10402
chr1:6419991-6420334	chr1	+	6419997	6420339	True	NM_031475,NM_181865,NM_181866	chr1,chr1,chr1	+,-,-	ESPN,ACOT7,ACOT7	64508,475,-993
chr1:24743267-24743845	chr1	+	24743411	24743815	True	NM_020448,NM_001199013,NM_001199012,NM_001199014,NM_178122	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	NIPAL3,C1orf201,C1orf201,C1orf201,C1orf201	-1217,-3149,-1824,-3149,-3149
chr6:75916990-75917233	chr6	+	75917024	75917180	True	NM_004370,NM_080645,NM_001100409	chr6,chr6,chr6	-,-,+	COL12A1,COL12A1,SENP6	-1401,-1401,394441
chr2:110876672-110877220	chr2	+	110876687	110877023	True	NM_005434,NR_037626	chr2,chr2	-,+	MALL,LOC100507334	-2544,126191
chr11:12394428-12395885	chr11	+	12394636	12395559	True	NM_018222,NM_013253	chr11,chr11	+,-	PARVA,DKK3	3466,-363719
chr12:124086982-124088096	chr12	+	124087169	124087895	True	NM_001414,NM_020936	chr12,chr12	-,+	EIF2B1,DDX55	30478,-548
chr1:918110-918310	chr1	+	918128	918358	True	NR_027693,NM_032129	chr1,chr1	-,+	C1orf170,PLEKHN1	-655,-16302
chr21:46710319-46711350	chr21	+	46710424	46711272	True	NM_133635,NR_026943,NR_004858,NM_015227	chr21,chr21,chr21,chr21	-,+,-,-	POFUT2,LOC642852,POFUT2,POFUT2	-2613,-2508,-2613,-2613
chr15:91498587-91498807	chr15	+	91498636	91498806	True	NM_033544,NM_001017919,NM_198527	chr15,chr15,chr15	+,+,-	RCCD1,RCCD1,HDDC3	-581,-581,-22862
chr17:12573094-12573438	chr17	+	12573154	12573486	True	NM_001146312,NM_153604,NM_001165962	chr17,chr17,chr17	+,+,-	MYOCD,MYOCD,ELAC2	-3998,-3998,347945
chr11:827806-828048	chr11	+	827912	828096	True	NM_001039490,NM_021128,NM_173584,NM_020376,NM_139030,NM_004357,NM_139029	chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,-,+,+,+,+,+	CD151,POLR2L,EFCAB4A,PNPLA2,CD151,CD151,CD151	4855,14483,-378,-9062,4855,4855,4855
chr1:159031341-159033205	chr1	+	159031907	159033219	True	NM_004833,NM_005531	chr1,chr1	-,+	AIM2,IFI16	13478,-52284
chr17:43394665-43395747	chr17_ctg5_hap1	+	9893	10857	False	NM_001159330,NM_001113738	chr17_ctg5_hap1,chr17_ctg5_hap1	-,+	ARHGAP27,ARL17A	87778,184863
chr17:43394665-43395747	chr17	+	43394757	43395721	True	NM_003954,NR_024435	chr17,chr17	-,+	MAP3K14,LOC100133991	-343,-55250
chr1:45475906-45476175	chr1	+	45475905	45476063	True	NM_024602,NR_036510,NM_000374	chr1,chr1,chr1	-,+,+	HECTD3,UROD,UROD	1014,1741,1741
chr1:184719940-184720928	chr1	+	184720089	184720892	True	NM_025191,NM_007212	chr1,chr1	-,+	EDEM3,RNF2	3203,293658
chr2:75874417-75875705	chr2	+	75874614	75875481	True	NM_014763,NM_001201334	chr2,chr2	+,-	MRPL19,C2orf3	-762,62309
chr6:42419811-42420116	chr6	+	42419884	42420137	True	NM_001184801,NM_033502	chr6,chr6	+,-	UBR2,TRERF1	111622,-101
chr11:95522719-95523068	chr11	+	95522967	95523117	True	NM_144664,NM_014679	chr11,chr11	-,+	FAM76B,CEP57	-13,524
chr1:183386047-183386318	chr1	+	183386140	183386362	True	NM_001174061,NM_015039	chr1,chr1	+,-	SMG7,NMNAT2	55143,1322
chr2:228736457-228737130	chr2	+	228736698	228737159	True	NM_025243,NM_178821	chr2,chr2	-,+	SLC19A3,WDR69	-153953,-422
chr20:36664001-36664257	chr20	+	36664069	36664165	True	NM_021215,NM_014657	chr20,chr20	+,-	RPRD1B,TTI1	-2179,-2236
chr5:173484564-173484823	chr5	+	173484601	173484871	True	NM_138369,NM_015980	chr5,chr5	-,+	BOD1,HMP19	-440935,-11928
chr16:69384496-69386373	chr16	+	69384591	69386228	True	NM_016101,NM_144676	chr16,chr16	+,-	NIP7,TMED6	-11227,8
chr19:54678494-54678828	chr19	+	54678532	54678672	True	NM_001145303,NM_144686,NM_024075	chr19,chr19,chr19	-,-,+	TMC4,TMC4,TSEN34	-1588,-1588,15446
chr2:192711507-192712209	chr2	+	192711686	192712242	True	NM_004657,NM_001031716	chr2,chr2	-,+	SDPR,OBFC2A	6,-168876
chrX:33196497-33197530	chrX	+	33196519	33197417	True	NM_004006,NM_152631	chrX,chrX	-,+	DMD,FAM47B	32318,1763495
chr13:44545283-44545540	chr13	+	44545285	44545587	True	NM_144974,NR_026955	chr13,chr13	-,+	CCDC122,NCRNA00284	-91459,50883
chr13:44545283-44545540	chr11	+	46401447	46401750	False	NM_001012333,NM_002391,NM_001012334,NM_000741	chr11,chr11,chr11,chr11	+,+,+,-	MDK,MDK,MDK,CHRM4	1552,1468,867,6407
chr1:47082064-47082286	chr1	+	47082096	47082326	True	NM_201403,NM_001145474,NM_145279	chr1,chr1,chr1	-,+,-	MOBKL2C,C1orf223,MOBKL2C	287,55173,-1291
chr1:74618517-74619779	chr1	+	74618517	74619580	True	NM_001105659,NM_001199328	chr1,chr1	-,+	LRRIQ3,FPGT	44348,44315
chr5:173131541-173132344	chr5	+	173131668	173132353	True	NR_027109,NM_138369	chr5,chr5	+,-	LOC285593,BOD1	-125062,-88002
chr2:68473498-68475067	chr2	+	68473622	68474970	True	NM_000945,NM_020143	chr2,chr2	-,+	PPP3R1,PNO1	4733,-88671
chr21:39481268-39481638	chr21	+	39481267	39481687	True	NM_005867,NR_026838	chr21,chr21	-,+	DSCR4,DSCR8	11817,11857
chr21:39481268-39481638	chr21	+	39481641	39481897	False	NM_005867,NR_026838	chr21,chr21	-,+	DSCR4,DSCR8	11607,11647
chr11:117196395-117197035	chr11	+	117196430	117196540	True	NM_014956,NM_138973,NM_012104,NM_138971,NM_138972	chr11,chr11,chr11,chr11,chr11	+,-,-,-,-	CEP164,BACE1,BACE1,BACE1,BACE1	2030,-9458,-9458,-9458,-9458
chr17:59927908-59928511	chr17	+	59928196	59928317	True	NM_032043,NM_018488	chr17,chr17	-,+	BRIP1,TBX4	12658,-394450
chr7:112758677-112758952	chr7	+	112758692	112759000	True	NR_024412,NM_182597,NR_015442	chr7,chr7,chr7	-,+,-	LOC401397,C7orf53,LOC401397	-55,-637677,-55
chr3:112927561-112928625	chr3	+	112927878	112928558	True	NR_027796,NM_033254	chr3,chr3	-,+	C3orf17,BOC	-189323,2816
chr16:58498592-58499032	chr16	+	58498614	58498932	True	NM_001130487,NR_002978,NM_020465,NM_022910	chr16,chr16,chr16,chr16	+,-,+,+	NDRG4,SNORA46,NDRG4,NDRG4	-671,83655,-1116,-2
chr12:53243548-53244367	chr12	+	53243836	53244317	True	NM_173352,NM_199187	chr12,chr12	-,+	KRT78,KRT18	-1058,98337
chr4:77317821-77319539	chr4	+	77318096	77319529	True	NM_001042784,NM_020859	chr4,chr4	-,+	CCDC158,SHROOM3	8987,36723
chr7:74865683-74865908	chr7	+	74865772	74865956	True	NM_001145064,NR_003664	chr7,chr7	-,+	GATSL2,SPDYE8P	1435,70576
chr7:74865683-74865908	chr7	+	99868053	99868175	False	NR_028040,NM_001004351,NR_028039,NR_028038,NM_178831	chr7,chr7,chr7,chr7,chr7	-,+,-,-,-	GATS,SPDYE3,GATS,GATS,GATS	1730,37149,1730,1730,1730
chr7:74865683-74865908	chr7	-	72570735	72570919	False	NR_002206,NR_003664,NR_003580	chr7,chr7,chr7	+,-,+	GTF2IP1,SPDYE8P,LOC100093631	-1760,-70426,-1774
chr7:74865683-74865908	chr7	-	74380555	74380677	False	NM_001025202,NM_001145063	chr7,chr7	-,+	STAG3L2,GATSL1	-73824,-1523
chr7:74865683-74865908	chr7	+	74651555	74651739	False	NR_002206,NM_001003795,NR_003580	chr7,chr7,chr7	-,+,-	GTF2IP1,GTF2IRD2B,LOC100093631	1756,-143266,1770
chr2:207506999-207507232	chr2	+	207507040	207507238	True	NM_001093730,NM_001102659	chr2,chr2	-,+	DYTN,LOC200726	75932,-9
chr18:74535407-74535632	chr18	+	74535413	74535627	True	NM_007345,NM_001025081	chr18,chr18	+,-	ZNF236,MBP	488,193478
chr16:70148940-70149185	chr16	+	70148959	70149019	True	NM_017990,NR_003610	chr16,chr16	+,-	PDPR,PDXDC2P	-1481,-49108
chr19:8642594-8643234	chr19	+	8642949	8643027	True	NM_012335,NM_031203	chr19,chr19	-,+	MYO1F,HNRNPM	-618,-133197
chr4:110741893-110742221	chr4	+	110741915	110742236	True	NM_018983,NM_006583,NM_000204,NM_032993	chr4,chr4,chr4,chr4	+,+,-,+	GAR1,RRH,CFI,GAR1	-5305,6913,-18580,-5305
chr11:67171664-67171901	chr11	+	67171742	67171926	True	NM_198517,NM_002708,NM_001008709,NM_206873	chr11,chr11,chr11,chr11	+,-,-,-	TBC1D10C,PPP1CA,PPP1CA,PPP1CA	-381,-2366,-2366,-2366
chr1:149858374-149858602	chr1	+	149858456	149858554	True	NM_175065,NM_003517,NM_003528	chr1,chr1,chr1	-,+,-	HIST2H2AB,HIST2H2AC,HIST2H2BE	962,2,-224
chr5:93447698-93448454	chr5	+	93447784	93448464	True	NM_032042,NM_001163417,NM_001163418,NR_028080,NM_032290	chr5,chr5,chr5,chr5,chr5	-,-,-,-,+	FAM172A,FAM172A,FAM172A,FAM172A,ANKRD32	-380,-380,-380,-380,505926
chr1:86175151-86175449	chr1	+	86175194	86175497	True	NM_001554,NM_001170670,NM_017953	chr1,chr1,chr1	+,-,-	CYR61,ZNHIT6,ZNHIT6	-128801,-1078,-1078
chr17:4268170-4268520	chr17	+	4268170	4268486	True	NM_003342,NM_182538	chr17,chr17	-,+	UBE2G1,SPNS3	1533,68732
chr17:59487610-59488124	chr17	+	59487683	59488173	True	NM_199290,NM_203425	chr17,chr17	-,+	NACA2,C17orf82	180440,938
chr8:48919752-48920573	chr8	+	48920404	48920489	True	NM_003350,NM_006904	chr8,chr8	+,-	UBE2V2,PRKDC	505,-47661
chr19:53967876-53968428	chr19	+	53967996	53968476	True	NR_002938,NM_001004301	chr19,chr19	-,+	LOC284379,ZNF813	138325,2512
chr1:40715173-40716529	chr1	+	40716195	40716492	True	NM_001008740,NM_005857,NM_001852	chr1,chr1,chr1	+,+,-	TMCO2,ZMPSTE24,COL9A2	-2680,7240,66498
chr17:36907312-36907979	chr17	+	36907462	36907889	True	NM_007144,NM_002795	chr17,chr17	-,+	PCGF2,PSMB3	-2904,1112
chr2:127414304-127415056	chr2	+	127414451	127415077	True	NM_002101,NM_016815,NM_139348	chr2,chr2,chr2	+,+,-	GYPC,GYPC,BIN1	-831,-831,449837
chrX:49127399-49128646	chrX	+	49127450	49128567	True	NM_001114377,NM_033215,NM_001184745,NM_014009	chrX,chrX,chrX,chrX	-,+,+,-	FOXP3,PPP1R3F,PPP1R3F,FOXP3	-6162,-1195,-1195,-6162
chr16:2302596-2303725	chr16	+	2302934	2303760	True	NR_037448,NM_001374,NM_001178029,NM_001919	chr16,chr16,chr16,chr16	+,+,-,-	MIR3677,DNASE1L2,ECI1,ECI1	16953,-16517,-1332,-1332
chr15:72560961-72561592	chr15	+	72561048	72561497	True	NM_020214,NR_027262	chr15,chr15	-,+	PARP6,C15orf34	2181,106956
chr2:88988673-88989048	chr2	+	88988873	88989095	True	NM_144563,NM_004836	chr2,chr2	+,-	RPIA,EIF2AK3	2080,-61779
chr20:32320227-32320438	chr20	+	32320281	32320457	True	NM_032819,NM_183397	chr20,chr20	+,-	ZNF341,PXMP4	-524,-12145
chr12:90037753-90038833	chr12	+	90038059	90038851	True	NM_001001323,NR_028138	chr12,chr12	-,+	ATP2B1,LOC338758	11046,63880
chr3:122398862-122399438	chr3	+	122398943	122399377	True	NM_024610,NM_017554	chr3,chr3	-,+	HSPBAP1,PARP14	113323,294
chr1:160616765-160617035	chr1	+	160616797	160617059	True	NM_021181,NM_003037	chr1,chr1	+,-	SLAMF7,SLAMF1	92017,72
chr18:28919895-28920425	chr18	+	28919894	28920256	True	NM_001942,NM_024421	chr18,chr18	+,-	DSG1,DSC1	-21894,-177075
chr1:25072798-25073115	chr1	+	25072855	25073154	True	NM_013943,NM_004350	chr1,chr1	+,-	CLIC4,RUNX3	-1146,183671
chr19:10810501-10810958	chr19	+	10810542	10810660	True	NM_031209,NR_024333	chr19,chr19	+,-	QTRT1,LOC147727	1451,-45994
chr5:112038152-112039079	chr5	+	112038227	112038858	True	NM_001127511,NM_005669	chr5,chr5	+,-	APC,REEP5	4343,219223
chr16:67594909-67595739	chr16	+	67594927	67595734	True	NM_001191022,NM_001138,NM_006565	chr16,chr16,chr16	+,-,+	CTCF,AGRP,CTCF	575,-77211,575
chr3:42448336-42449618	chr3	+	42448339	42449446	True	NM_004624,NM_144634	chr3,chr3	+,-	VIPR1,LYZL4	94657,2670
chr7:100489028-100490142	chr7	+	100489195	100490154	True	NM_000665,NM_015908,NM_015831,NM_001015072	chr7,chr7,chr7,chr7	-,+,-,-	ACHE,SRRT,ACHE,UFSP1	3437,-16545,3437,-1856
chr1:206812517-206812897	chr1	+	206812673	206812785	True	NM_003582,NM_001004023,NM_006893	chr1,chr1,chr1	+,+,-	DYRK3,DYRK3,EIF2D	-3850,-3850,-26769
chr12:7039881-7040596	chr12	+	7039997	7040428	True	NM_001940,NM_001007026,NR_003010	chr12,chr12,chr12	+,+,-	ATN1,ATN1,SCARNA12	-2569,-6423,36392
chr8:144350046-144350384	chr8	+	144350264	144350324	True	NM_052963,NM_138465	chr8,chr8	-,+	TOP1MT,GLI4	66776,-708
chr1:118149324-118149612	chr1	+	118149386	118149612	True	NM_017686,NM_017709	chr1,chr1	-,+	GDAP2,FAM46C	322740,-835
chr21:47747852-47748668	chr21	+	47747893	47748365	True	NM_006031,NM_058180	chr21,chr21	+,-	PCNT,C21orf58	-3908,-4108
chr19:47810897-47811191	chr19	+	47810898	47810974	True	NM_001736,NM_001127242	chr19,chr19	+,-	C5AR1,BBC3	2129,-74875
chr1:32828452-32828712	chr1	+	32828490	32828692	True	NM_052841,NM_001167676	chr1,chr1	+,-	TSSK3,LOC100128071	-679,-646
chr2:198524078-198525576	chr2	+	198524553	198525628	True	NM_144629,NM_138395	chr2,chr2	-,+	RFTN2,MARS2	15013,44399
chr16:89629380-89630217	chr16	+	89629464	89630248	True	NM_033251,NR_002450,NM_000977,NM_013275	chr16,chr16,chr16,chr16	+,+,+,-	RPL13,SNORD68,RPL13,ANKRD11	-2384,-1677,-2425,-72495
chr19:50881937-50882395	chr19	+	50881942	50882444	True	NM_007121,NM_002691,NM_004851	chr19,chr19,chr19	+,+,-	NR1H2,POLD1,NAPSA	-2308,5148,-13011
chr6:87832585-87833117	chr6	+	87832601	87832825	True	NM_000735,NM_015021	chr6,chr6	-,+	CGA,ZNF292	-27777,32443
chr8:74791401-74792511	chr8	+	74791420	74792550	True	NM_001001481,NM_018299,NM_001040613	chr8,chr8,chr8	-,-,+	UBE2W,UBE2W,TMEM70	-310,-310,95826
chr3:52323010-52324087	chr3	+	52323041	52324021	True	NM_001144951,NR_029677,NR_026701,NR_026700,NR_026702,NM_145262,NR_026699	chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,-,+,+,+,+,+	GLYCTK,MIR135A1,GLYCTK,GLYCTK,GLYCTK,GLYCTK,GLYCTK	-1256,4353,-1256,-1256,-1256,-1256,-1256
chr4:10042919-10043642	chr4	+	10042941	10043527	True	NM_000798,NM_001001290	chr4,chr4	+,-	DRD5,SLC2A9	-259734,-1069
chr1:114522562-114523089	chr1	+	114522588	114523130	True	NM_006594,NM_020190	chr1,chr1	-,+	AP4B1,OLFML3	-74847,-613
chr16:11362984-11363852	chr16	+	11363060	11363780	True	NM_021247,NM_005425,NM_152308,NM_002762	chr16,chr16,chr16,chr16	-,-,+,-	PRM3,TNP2,C16orf75,PRM2	3722,100,75530,6607
chr12:119772777-119773037	chr12	+	119772810	119773080	True	NR_024246,NM_178499	chr12,chr12	-,+	LOC144742,CCDC60	-31625,-346
chr2:11670615-11671069	chr2	+	11670825	11671104	True	NR_003095,NM_148903,NM_014668	chr2,chr2,chr2	-,+,+	E2F6,GREB1,GREB1	-64528,8975,3137
chr12:27155333-27156167	chr12	+	27155473	27156213	True	NM_004264,NM_016551	chr12,chr12	+,-	MED21,TM7SF3	19269,11183
chr1:120255705-120256896	chr1	+	120255713	120256795	True	NM_006623,NM_001166107	chr1,chr1	+,-	PHGDH,HMGCS2	-1346,54810
chr13:37679759-37680391	chr13	+	37679782	37680229	True	NM_145203,NM_181503	chr13,chr13	-,+	CSNK1A1L,EXOSC8	19,-105157
chr2:63279260-63279643	chr2	+	63279391	63279691	True	NR_027069,NM_014562,NM_001199770,NR_033389	chr2,chr2,chr2,chr2	-,+,+,-	LOC100132215,OTX1,OTX1,LOC100132215	-4545,-1505,-2250,-3735
chr13:30018488-30019369	chr13	+	30018584	30019255	True	NM_015233,NM_003045	chr13,chr13	+,-	MTUS2,SLC7A1	-15858,150620
chrX:138918108-138918394	chrX	+	138918208	138918363	True	NM_173694,NM_000133,NM_001010986	chrX,chrX,chrX	-,+,-	ATP11C,F9,ATP11C	-3761,-305365,-3761
chr9:69382377-69382811	chr9	+	69382518	69382639	True	NM_001085457,NM_001098805	chr9,chr9	-,+	CBWD6,ANKRD20A4	-119925,-594
chr9:69382377-69382811	chr9	+	67927356	67927419	False	NR_027422,NM_001012419,NM_032250	chr9,chr9,chr9	-,+,+	FAM27B,ANKRD20A3,ANKRD20A1	-133167,-651,-651
chr9:69382377-69382811	chr9	+	42368898	42368961	False	NR_003670,NM_001012419,NM_001012421	chr9,chr9,chr9	-,+,+	KGFLP2,ANKRD20A3,ANKRD20A2	-349314,-651,-651
chr9:69382377-69382811	chr9	-	43132885	43132948	False	NM_001012419,NR_026558,NM_001012421	chr9,chr9,chr9	-,+,-	ANKRD20A3,AQP7P3,ANKRD20A2	651,-274789,651
chr1:1166612-1167007	chr1	+	1166656	1166844	True	NM_080605,NM_016547,NM_016176	chr1,chr1,chr1	+,-,-	B3GALT6,SDF4,SDF4	784,653,653
chr5:79785665-79785932	chr5	+	79785763	79785941	True	NM_205548,NM_001004441	chr5,chr5	+,-	FAM151B,ANKRD34B	-2018,80413
chr16:30416397-30416881	chr16	+	30416578	30416748	True	NM_152652,NM_001142305,NM_016643,NM_052838	chr16,chr16,chr16,chr16	+,+,+,-	ZNF48,ZNF771,ZNF771,SEPT1	-9584,1986,1986,-22407
chr1:53392449-53392725	chr1	+	53392449	53392679	True	NM_002979,NM_001198962,NM_001193599,NM_001193600,NM_001193617,NM_018281,NM_001198961,NM_001007098	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,-,+,+,+,-,-,+	SCP2,ECHDC2,SCP2,SCP2,SCP2,ECHDC2,ECHDC2,SCP2	221,-5003,221,221,221,-5003,-5003,221
chr11:89446366-89447683	chr11	+	89446891	89447727	True	NM_001146162,NM_020358	chr11,chr11	+,-	TRIM77,TRIM49	-3476,94066
chr1:101701525-101701732	chr1	+	101701581	101701769	True	NM_001400,NM_015958	chr1,chr1	+,-	S1PR1,DPH5	535,-210219
chr21:45596876-45597082	chr21	+	45597033	45597129	True	NM_198155,NM_015259	chr21,chr21	+,-	C21orf33,ICOSLG	-43590,63755
chr1:1207463-1207925	chr1	+	1207547	1207974	True	NR_037668,NM_194458,NM_194315,NM_194457,NM_001130413,NM_058167	chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,-,+,-	SCNN1D,UBE2J2,UBE2J2,UBE2J2,SCNN1D,UBE2J2	2663,1310,1310,1310,2663,1310
chr8:22460099-22460590	chr8	+	22460176	22460591	True	NM_001013842,NM_173686,NR_027715,NM_021174,NR_033902,NM_001198827	chr8,chr8,chr8,chr8,chr8,chr8	+,+,-,+,+,+	C8orf58,C8orf58,FLJ14107,KIAA1967,KIAA1967,C8orf58	-3113,-3113,39184,1947,1553,-3113
chr7:23151363-23153169	chr7	+	23151498	23153023	True	NR_033329,NR_033328,NM_018846,NM_001172428,NM_032581,NM_001031710	chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,-,+	KLHL7,KLHL7,KLHL7,KLHL7,FAM126A,KLHL7	-6196,-6196,-5632,-6196,-97728,-6196
chr19:55972340-55972558	chr19	+	55972421	55972603	True	NM_024710,NM_033113,NM_001136202,NM_001136201	chr19,chr19,chr19,chr19	-,+,-,-	ISOC2,ZNF628,ISOC2,ISOC2	496,15095,496,496
chr2:191400890-191401990	chr2	+	191401143	191402024	True	NM_001142645,NM_005966	chr2,chr2	-,+	TMEM194B,NAB1	-1675,111823
chr7:66321438-66322185	chr7	+	66321594	66321838	True	NR_003934,NM_017994	chr7,chr7	-,+	LOC729156,C7orf42	-11781,64364
chr6:43483023-43483641	chr6	+	43483105	43483600	True	NM_004875,NM_001012974,NM_203290,NM_015388	chr6,chr6,chr6,chr6	+,-,+,-	POLR1C,C6orf154,POLR1C,YIPF3	1190,-4681,1176,1179
chr20:308314-308559	chr20	+	308363	308465	True	NM_153269,NM_006943	chr20,chr20	-,+	C20orf96,SOX12	-36973,-2175
chr11:47447744-47447963	chr11	+	47447781	47448009	True	NM_002804,NM_152264	chr11,chr11	-,+	PSMC3,SLC39A13	65,-17786
chr3:53380881-53381085	chr3	+	53380912	53381134	True	NM_018403,NM_000720	chr3,chr3	-,+	DCP1A,CACNA1D	570,147896
chr3:149796977-149797923	chr3	+	149797000	149797883	True	NM_053024,NR_036538	chr3,chr3	-,+	PFN2,LOC646903	-108259,-107986
chr12:52942799-52943047	chr12	+	52942820	52942991	True	NM_033448,NM_002284	chr12,chr12	-,+	KRT71,KRT86	3991,-247222
chr5:168005869-168006143	chr5	+	168005868	168006188	True	NM_024594,NR_031721	chr5,chr5	-,+	PANK3,MIR103-1AS	476,-18010
chr3:45729045-45729774	chr3	+	45729375	45729774	True	NM_014016,NR_033947	chr3,chr3	+,-	SACM1L,LOC644714	979,651
chr15:89876953-89877315	chr15	+	89877046	89877303	True	NM_001126131,NR_029692,NM_002693	chr15,chr15,chr15	-,+,-	POLG,MIR9-3,POLG	774,33944,774
chr1:118686598-118688231	chr1	+	118686770	118688264	True	NM_006784,NM_206996	chr1,chr1	+,-	WDR3,SPAG17	-214449,39638
chr16:88211614-88211923	chr16	+	88211618	88211754	True	NM_001173543,NM_001739	chr16,chr16	+,-	BANP,CA5A	-208045,-241506
chr11:36341884-36343472	chr11	+	36341966	36343216	True	NM_014186,NM_001160167	chr11,chr11	-,+	COMMD9,PRR5L	-30967,-24292
chr3:30648981-30649722	chr3	+	30649010	30649772	True	NM_207359,NM_003242,NM_001024847	chr3,chr3,chr3	-,+,+	GADL1,TGFBR2,TGFBR2	286433,-1068,-1068
chr1:95587184-95588663	chr1	+	95587352	95588707	True	NM_001199691,NM_152487,NM_144988	chr1,chr1,chr1	+,+,-	TMEM56-RWDD3,TMEM56,ALG14	-3931,-4516,-48845
chr13:33848552-33848808	chr13	+	33848587	33848842	True	NM_004795,NM_178006	chr13,chr13	+,-	KL,STARD13	-258074,11116
chr1:11870600-11870988	chr1	+	11870687	11870826	True	NM_001286,NM_005957,NM_021736,NM_021737,NM_021735	chr1,chr1,chr1,chr1,chr1	+,-,+,+,+	CLCN6,MTHFR,CLCN6,CLCN6,CLCN6	-4538,-4527,-4538,-4538,-4538
chr2:120983412-120984079	chr2	+	120983702	120984108	True	NM_002881,NR_000034	chr2,chr2	+,-	RALB,TMEM185B	26305,-2718
chr6:32495578-32496324	chr6	+	32495701	32496351	True	NM_002125,NM_019111	chr6,chr6	-,+	HLA-DRB5,HLA-DRA	1705,-88133
chr19:4005462-4005995	chr19	+	4005694	4005991	True	NM_015897,NM_001961	chr19,chr19	+,-	PIAS4,EEF2	1757,-20233
chr11:417586-417861	chr11	+	417824	417906	True	NM_001135053,NM_007183,NM_001135054,NM_021805	chr11,chr11,chr11,chr11	-,+,-,-	SIGIRR,PKP3,SIGIRR,SIGIRR	-427,-23658,-2825,-427
chr16:58661890-58662295	chr16	+	58662104	58662336	True	NM_016284,NM_206999,NM_024860	chr16,chr16,chr16	-,-,+	CNOT1,CNOT1,SETD6	1466,1466,-112791
chr1:43824062-43824297	chr1	+	43824195	43824286	True	NM_022821,NM_001255	chr1,chr1	-,+	ELOVL1,CDC20	9464,339
chr7:96747107-96747777	chr7	+	96747114	96747825	True	NM_005221,NM_020186	chr7,chr7	-,+	DLX5,ACN9	-92971,-1260
chr1:226921333-226922528	chr1	+	226921405	226922557	True	NM_002221,NM_000447	chr1,chr1	-,+	ITPKB,PSEN2	4369,135715
chr16:88922878-88923132	chr16	+	88922877	88923181	True	NM_001080487,NM_016209,NM_000512	chr16,chr16,chr16	-,+,-	PABPN1L,TRAPPC2L,GALNS	9937,324,243
chr1:109000581-109001214	chr1	+	109000755	109001176	True	NM_001102592,NM_001143987,NM_001143988	chr1,chr1,chr1	-,+,+	HENMT1,NBPF6,NBPF6	202621,-7909,-7909
chr1:109000581-109001214	chr1	-	108778412	108778833	False	NM_001143987,NM_001143989	chr1,chr1	+,-	NBPF6,NBPF4	214070,7927
chr9:46208222-46209617	chr9	+	46208785	46209484	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2578055,478081
chr9:46208222-46209617	chr9	-	46294790	46295475	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2664060,392090
chr9:46208222-46209617	chr9	+	45087734	45088419	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-97557,-1457004
chr19:48866781-48867339	chr19	+	48867047	48867331	True	NM_012451,NM_018273	chr19,chr19	+,-	SYNGR4,TMEM143	319,-33
chr1:233086655-233088114	chr1	+	233086766	233087832	True	NM_032324,NM_014801	chr1,chr1	+,-	NTPCR,PCNXL2	-447,343677
chr19:51507365-51509228	chr19	+	51507663	51508938	True	NM_012315,NM_144505,NM_144507,NM_144506,NM_014441,NM_007196	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,+,-	KLK9,KLK8,KLK8,KLK8,SIGLEC9,KLK8	4014,-2705,-2705,-2705,119198,-2705
chr9:139651108-139651361	chr9	+	139651117	139651401	True	NM_203347,NM_178469,NR_033913,NM_198946	chr9,chr9,chr9,chr9	-,-,+,-	LCN15,LCN8,LOC100128593,LCN6	7614,1380,-10555,-8137
chr4:145562988-145563229	chr4	+	145563216	145563278	True	NR_037595,NM_022475	chr4,chr4	-,+	LOC646576,HHIP	3943,3869
chr6:135783961-135785840	chr6	+	135784055	135785597	True	NM_001134830,NR_026805	chr6,chr6	-,+	AHI1,NCRNA00271	33363,33341
chrX:23695156-23696109	chrX	+	23695156	23695854	True	NM_006406,NM_001033583	chrX,chrX	+,-	PRDX4,ACOT9	-9572,65613
chr15:56537560-56538298	chr15	+	56537571	56538311	True	NM_022841,NM_198524	chr15,chr15	-,+	RFX7,TEX9	-2088,119332
chr18:47815393-47816700	chr18	+	47815496	47816745	True	NM_001204137,NM_001204138,NM_001204139,NM_015844,NM_015847,NM_015846,NM_001204140,NM_001204141,NM_001101654,NM_001204136,NM_001204151,NM_001039535,NM_001204143,NM_015845,NM_002384,NM_001204142,NM_014593	chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18	-,-,-,-,-,-,-,-,-,-,-,+,-,-,-,-,-	MBD1,MBD1,MBD1,MBD1,MBD1,MBD1,MBD1,MBD1,CXXC1,MBD1,MBD1,SKA1,MBD1,MBD1,MBD1,MBD1,CXXC1	-7352,-7352,-7352,-7352,-7352,-7352,-7352,-7352,-804,-7352,-9109,84646,-7359,-7352,-7352,-7352,-804
chrX:102627156-102628324	chrX	+	102627225	102628104	True	NM_206915,NM_206917,NM_014380,NM_032621	chrX,chrX,chrX,chrX	+,+,+,-	NGFRAP1,NGFRAP1,NGFRAP1,BEX2	3163,3163,4004,-61251
chr10:93370380-93372372	chr10	+	93370386	93371726	True	NM_025235,NR_024467	chr10,chr10	+,-	TNKS2,LOC100188947	186424,105
chr11:12984253-12985055	chr11	+	12984271	12984889	True	NM_001080521,NM_032320	chr11,chr11	+,-	RASSF10,BTBD10	46080,499999
chr1:46858929-46859669	chr1	+	46858946	46859516	True	NM_001441,NM_006369	chr1,chr1	+,-	FAAH,LRRC41	422,-89908
chr16:693825-694313	chr16	+	693847	693967	True	NM_001040165,NM_001040160,NM_001040161,NM_001040162,NM_138418,NM_145294,NM_032366	chr16,chr16,chr16,chr16,chr16,chr16,chr16	-,-,-,-,+,+,-	C16orf13,C16orf13,C16orf13,C16orf13,FAM195A,WDR90,C16orf13	-7500,-7500,-7500,-7500,-2049,5395,-7500
chr20:31662888-31664644	chr20	+	31662957	31664325	True	NM_182519,NM_080675	chr20,chr20	+,-	C20orf186,SUN5	4992,-70718
chr11:126027991-126029622	chr11	+	126028288	126029619	True	NM_001144827,NM_024556	chr11,chr11	-,+	RPUSD4,FAM118B	52018,51999
chr17:43213427-43213948	chr17	+	43213508	43213932	True	NM_024722,NM_001135704,NM_001135707,NM_001135706,NM_001135705,NM_133373	chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,-	ACBD4,ACBD4,ACBD4,ACBD4,ACBD4,PLCD3	-545,-3592,-545,-545,-545,-3617
chr1:211433995-211434275	chr1	+	211434013	211434259	True	NM_001136225,NM_001136224,NM_172362,NM_001136223,NM_018254	chr1,chr1,chr1,chr1,chr1	+,+,-,+,+	RCOR3,RCOR3,KCNH1,RCOR3,RCOR3	-1356,-1356,-126556,-1356,-775
chr17:79195129-79195394	chr17	+	79195149	79195383	True	NM_001009811,NM_014984,NM_001086521	chr17,chr17,chr17	-,-,+	AZI1,AZI1,C17orf89	1418,1418,17727
chr11:10300184-10300640	chr11	+	10300351	10300538	True	NM_030962,NM_001124	chr11,chr11	-,+	SBF2,ADM	15269,26103
chr22:27039296-27040365	chr22	+	27039304	27040377	True	NR_003491,NM_001887	chr22,chr22	+,-	MIAT,CRYBB1	13068,-25313
chr14:53623523-53625005	chr14	+	53623652	53624785	True	NM_030637,NM_001160148,NM_001160147,NM_145251	chr14,chr14,chr14,chr14	-,-,-,+	DDHD1,DDHD1,DDHD1,STYX	-3606,-3606,-3606,-426827
chr12:7055328-7055584	chr12	+	7055395	7055469	True	NM_138425,NM_080548,NM_080549,NR_003010,NM_002831	chr12,chr12,chr12,chr12,chr12	+,+,+,-,+	C12orf57,PTPN6,PTPN6,SCARNA12,PTPN6	-2243,270,4964,21350,4964
chr6:168224689-168225285	chr6	+	168224740	168225300	True	NR_027906,NM_001040000	chr6,chr6	-,+	C6orf124,MLLT4	2228,2370
chr7:2272755-2273213	chr7	+	2272766	2273178	True	NM_003550,NM_198954,NM_002452,NM_198952,NM_198950,NM_013393,NM_001013836,NM_001013837,NM_198948,NM_198949,NM_198953	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,+,-,-,-,+,+,+	MAD1L1,NUDT1,NUDT1,NUDT1,NUDT1,FTSJ2,MAD1L1,MAD1L1,NUDT1,NUDT1,NUDT1	-183,9361,8678,8717,8717,8705,-183,-183,8678,8678,9361
chr10:64576980-64577196	chr10	+	64577113	64577241	True	NM_001136179,NM_001136178,NM_032804,NM_001136177,NM_000399	chr10,chr10,chr10,chr10,chr10	-,-,+,-,-	EGR2,EGR2,ADO,EGR2,EGR2	-987,1736,-12648,-987,-987
chr3:14715208-14716873	chr3	+	14715220	14716697	True	NM_001184957,NM_001080423,NM_001184958,NM_032137	chr3,chr3,chr3,chr3	+,-,+,+	C3orf20,GRIP2,C3orf20,C3orf20	69,-131632,69,69
chr10:15763348-15765138	chr10	+	15763409	15764931	True	NM_183005,NM_003638	chr10,chr10	+,-	RPP38,ITGA8	-624285,-1639
chr8:145598791-145599201	chr8	+	145598805	145599197	True	NM_024555,NM_174922	chr8,chr8	-,+	FBXL6,ADCK5	-16673,-1125
chr11:111848636-111850180	chr11	+	111848745	111850147	True	NM_001885,NM_033425	chr11,chr11	-,+	CRYAB,DIXDC1	-66272,-769
chr19:13858989-13859313	chr19	+	13858990	13859304	True	NR_036515,NM_030818	chr19,chr19	-,+	LOC284454,CCDC130	87849,-288
chr17:25960663-25961039	chr17	+	25960704	25961081	True	NM_000625,NM_009587,NM_002308,NR_024043	chr17,chr17,chr17,chr17	-,+,+,+	NOS2,LGALS9,LGALS9,LGALS9	166525,-2581,-2581,-2581
chrX:153879846-153880693	chrX	+	153879845	153880691	True	NM_172377,NM_020994,NM_139250	chrX,chrX,chrX	-,-,+	CTAG2,CTAG2,CTAG1A	1212,1212,-66489
chr19:45738714-45739161	chr19	+	45738799	45739109	True	NM_001199867,NM_138568	chr19,chr19	+,-	MARK4,EXOC3L2	15406,-1330
chr15:45882764-45884179	chr15	+	45882960	45884199	True	NM_012388,NM_013309	chr15,chr15	+,-	PLDN,SLC30A4	-3610,-67958
chrX:103811250-103811643	chrX	+	103811367	103811691	True	NM_153448,NM_017416	chrX,chrX	-,+	ESX1,IL1RAPL2	-311768,-423
chr17:16284096-16284397	chr17	+	16284101	16284409	True	NM_018955,NM_181716	chr17,chr17	+,-	UBB,CENPV	-33,-27289
chr12:52913179-52913775	chr12	+	52913254	52913792	True	NM_002284,NM_000424	chr12,chr12	+,-	KRT86,KRT5	-217669,501
chr19:43036563-43038122	chr19	+	43036716	43037760	True	NM_001410,NM_001184816,NM_001184815,NM_001184813,NM_001024912,NM_001712	chr19,chr19,chr19,chr19,chr19,chr19	+,-,-,-,-,-	MEGF8,CEACAM1,CEACAM1,CEACAM1,CEACAM1,CEACAM1	-207006,-4055,-4055,-4055,-4055,-4055
chr11:44096532-44097136	chr11	+	44096711	44097093	True	NM_032592,NM_021926,NM_001127219	chr11,chr11,chr11	+,-,+	ACCS,ALX4,ACCS	-8958,234673,-9041
chr11:27528165-27528374	chr11	+	27528287	27528423	True	NR_033312,NR_033313,NR_033314,NR_033315,NR_002832,NM_018362	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,-	BDNF-AS1,BDNF-AS1,BDNF-AS1,BDNF-AS1,BDNF-AS1,LIN7C	-21,-21,-21,-21,-21,25
chr19:1325571-1325867	chr19	+	1325665	1325801	True	NR_027271,NM_032853	chr19,chr19	-,+	C19orf23,MUM1	-55406,29174
chr8:145751460-145752180	chr8	+	145751470	145752210	True	NM_001001795,NM_001024678,NM_014665,NM_004260	chr8,chr8,chr8,chr8	-,-,+,-	C8orf82,LRRC24,LRRC14,RECQL4	2298,256,-8158,-8260
chr2:96783272-96783505	chr2	+	96783292	96783456	True	NR_003698,NM_000682	chr2,chr2	+,-	LOC729234,ADRA2B	-107044,-1404
chr3:129326628-129326998	chr3	+	129326767	129327039	True	NM_153833,NM_015103	chr3,chr3	+,-	H1FOO,PLXND1	-64761,-1185
chr15:78369693-78369903	chr15	+	78369770	78369842	True	NM_015079,NM_001101404,NM_144572	chr15,chr15,chr15	-,+,-	TBC1D2B,SH2D7,TBC1D2B	202,15084,202
chr14:89290681-89290964	chr14	+	89290756	89290904	True	NM_183387,NM_144596,NM_198310,NM_198309	chr14,chr14,chr14,chr14	-,+,+,+	EML5,TTC8,TTC8,TTC8	-31660,73,73,73
chr1:186434206-186435691	chr1	+	186434340	186435606	True	NM_002597,NM_022375	chr1,chr1	-,+	PDC,OCLM	-4101,-64696
chr4:178257369-178257629	chr4	+	178257376	178257662	True	NM_000027,NM_018248	chr4,chr4	-,+	AGA,NEIL3	106045,-26436
chr19:40923189-40923423	chr19	+	40923189	40923393	True	NM_181882,NM_020971,NM_020956,NM_013376	chr19,chr19,chr19,chr19	-,+,-,-	PRX,SPTBN4,PRX,SERTAD1	-3918,49732,-3918,8589
chr7:106811808-106812227	chr7	+	106811836	106812048	True	NM_012257,NM_006348	chr7,chr7	+,-	HBP1,COG5	-2427,392961
chr1:149858660-149859318	chr1	+	149858834	149859225	True	NM_175065,NM_003517,NM_003528	chr1,chr1,chr1	-,+,-	HIST2H2AB,HIST2H2AC,HIST2H2BE	291,-360,-602
chrX:15353668-15353904	chrX	+	15353742	15353950	True	NR_033835,NR_033836,NM_020473,NM_002641,NM_203281	chrX,chrX,chrX,chrX,chrX	-,-,-,-,+	PIGA,PIGA,PIGA,PIGA,BMX	-66,-66,-66,-66,164949
chr14:63589414-63589722	chr14	+	63589435	63589723	True	NM_172376,NM_020663	chr14,chr14	-,+	KCNH5,RHOJ	-20851,81421
chr9:127949647-127950586	chr9	+	127949940	127950301	True	NM_002721,NM_001174152,NM_001123355,NM_001123369	chr9,chr9,chr9,chr9	-,+,-,-	PPP6C,RABEPK,PPP6C,PPP6C	1974,12519,1974,1974
chr6:17598203-17599215	chr6	+	17598434	17599088	True	NM_005124,NM_016255	chr6,chr6	-,+	NUP153,FAM8A1	107780,1429
chr8:146078565-146078791	chr8	+	146078617	146078791	True	NM_001081003,NM_001081004,NM_014066,NM_003416	chr8,chr8,chr8,chr8	-,-,-,+	COMMD5,COMMD5,COMMD5,ZNF7	191,-166,-165,-25765
chr9:42853717-42854164	chr9	+	42853776	42854152	True	NR_026759,NR_026558	chr9,chr9	-,+	FAM95B1,AQP7P3	179210,3999
chr9:42853717-42854164	chr9	-	69655196	69655572	False	NM_001085457,NR_024443	chr9,chr9	-,+	CBWD6,LOC100133920	-392603,-3886
chr9:42853717-42854164	chr9	+	67026763	67027139	False	NR_024443,NR_024496	chr9,chr9	-,+	LOC100133920,LOC442421	3893,-532545
chr9:42853717-42854164	chr9	-	67293244	67293620	False	NM_032250,NR_002817	chr9,chr9	+,-	ANKRD20A1,AQP7P1	633140,-3752
chr15:42743915-42745042	chr15	+	42744046	42744813	True	NM_022473,NM_003825	chr15,chr15	-,+	ZFP106,SNAP23	4975,43021
chr9:135542343-135542844	chr9	+	135542598	135542722	True	NM_022779,NM_012204,NM_138620	chr9,chr9,chr9	-,+,-	DDX31,GTF3C4,DDX31	3116,3005,3116
chr1:22377335-22377625	chr1	+	22377439	22377534	True	NM_001039802,NM_030761,NM_044472,NM_001791	chr1,chr1,chr1,chr1	+,-,+,+	CDC42,WNT4,CDC42,CDC42	1585,92048,1585,1585
chr17:637068-638545	chr17	+	637101	637966	True	NM_015721,NM_024792	chr17,chr17	-,+	GEMIN4,FAM57A	17594,-1305
chr10:73728917-73729138	chr10	+	73729043	73729119	True	NM_002778,NM_004273	chr10,chr10	-,+	PSAP,CHST3	-117961,-4974
chr2:85812729-85813553	chr2	+	85812741	85813415	True	NM_003761,NM_016494,NM_001031738,NM_006634	chr2,chr2,chr2,chr2	+,+,-,+	VAMP8,RNF181,TMEM150A,VAMP5	-8178,9421,16464,-1261
chr6:127440074-127440411	chr6	+	127440104	127440415	True	NM_032784,NM_001139510	chr6,chr6	+,-	RSPO3,ECHDC1	-109,223188
chr16:4325181-4326009	chr16	+	4325229	4325951	True	NM_032575,NM_003223	chr16,chr16	+,-	GLIS2,TFAP4	56273,-2228
chr2:193060697-193060930	chr2	+	193060717	193060893	True	NM_001031716,NM_016192	chr2,chr2	+,-	OBFC2A,TMEFF2	-517907,-1073
chr4:78080101-78081043	chr4	+	78080101	78081080	True	NM_004354,NM_006835	chr4,chr4	+,-	CCNG2,CCNI	-1795,-82976
chr11:71817172-71817788	chr11	+	71817320	71817679	True	NM_014042,NR_026886,NM_017907	chr11,chr11,chr11	-,+,-	C11orf51,LRTOMT,LAMTOR1	6194,-25678,-2887
chr19:49658421-49658675	chr19	+	49658446	49658648	True	NM_001195227,NM_017636,NM_002152	chr19,chr19,chr19	+,+,-	TRPM4,TRPM4,HRC	2367,2367,83
chr8:144698302-144699409	chr8	+	144698329	144699273	True	NM_001082480,NM_003313,NM_032862,NM_023078	chr8,chr8,chr8,chr8	+,-,+,-	ZNF623,TSTA3,TIGD5,PYCRL	19099,509,-18306,-6545
chr9:84677025-84677448	chr9	+	84677066	84677362	True	NM_005077,NM_001001670	chr9,chr9	-,+	TLE1,FAM75D1	-373470,-73437
chr2:233273215-233273670	chr2	+	233273241	233273715	True	NM_031313,NR_028501	chr2,chr2	+,-	ALPPL2,ECEL1P2	-1740,-21487
chr2:233273215-233273670	chr2	+	233245334	233245634	False	NR_028501,NM_001632	chr2,chr2	-,+	ECEL1P2,ALPP	6170,-2037
chr3:33137873-33138082	chr3	+	33137911	33138123	True	NM_001039770,NM_001136238,NM_006371,NM_000404,NM_001079811,NM_001135602	chr3,chr3,chr3,chr3,chr3,chr3	-,-,+,-,-,-	TMPPE,TMPPE,CRTAP,GLB1,GLB1,GLB1	220,220,17326,621,241,621
chr9:21801348-21801892	chr9	+	21801466	21801917	True	NM_058197,NM_002451	chr9,chr9	-,+	CDKN2A,MTAP	172959,717
chr6:158658134-158659998	chr6	+	158658618	158659449	True	NM_207118,NM_032861	chr6,chr6	+,-	GTF2H5,SERAC1	-69290,-69306
chr14:88848185-88849610	chr14	+	88848378	88849586	True	NM_021161,NM_001040428,NM_018418	chr14,chr14,chr14	-,+,+	KCNK10,SPATA7,SPATA7	-55122,2401,2401
chr11:507679-508256	chr11	+	507875	508189	True	NM_002939,NM_198075,NM_203389,NM_203388,NM_203387,NM_203386,NM_203385,NM_203384,NM_203383	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,+,-,-,-,-,-,-,-	RNH1,LRRC56,RNH1,RNH1,RNH1,RNH1,RNH1,RNH1,RNH1	-1054,29332,-602,-602,-602,-602,-1054,-1054,-1054
chr10:14374077-14374367	chr10	+	14374290	14374368	True	NR_031668,NM_018027	chr10,chr10	+,-	MIR1265,FRMD4A	104206,-1424
chr12:56112434-56112818	chr12	+	56112454	56112810	True	NM_001144997,NR_037656,NR_037658,NR_037655,NR_037657,NM_001487,NM_002905,NM_001199771	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,+,+,+,+,+	ITGA7,BLOC1S1,BLOC1S1-RDH5,BLOC1S1,BLOC1S1,BLOC1S1,RDH5,RDH5	-6365,-2429,-2687,-2687,-2429,-2687,1340,1340
chr17:40812919-40813687	chr17	+	40812987	40813561	True	NM_024927,NM_016437	chr17,chr17	-,+	PLEKHH3,TUBG2	15539,-1772
chr19:58900289-58901094	chr19	+	58900288	58900914	True	NM_001195135,NM_138466,NM_001009,NM_001129730	chr19,chr19,chr19,chr19	+,-,+,-	LOC646862,ZNF837,RPS5,ZNF837	6542,-7899,-1703,-7899
chr6:35750628-35751209	chr6	+	35750750	35750934	True	NM_001010886,NM_207409,NM_001832	chr6,chr6,chr6	+,+,-	C6orf127,C6orf126,CLPS	-1980,-6419,14218
chr12:96164507-96164858	chr12	+	96164509	96164761	True	NM_003095,NM_021229	chr12,chr12	+,-	SNRPF,NTN4	87947,19833
chr15:49768009-49769111	chr15	+	49768103	49768678	True	NM_152647,NM_002009	chr15,chr15	-,+	C15orf33,FGF7	144501,-52779
chr16:223737-224240	chr16	+	223740	224208	True	NM_001077350,NM_000558,NM_000517,NM_001003938,NM_005331	chr16,chr16,chr16,chr16,chr16	-,+,+,+,+	NPRL3,HBA1,HBA2,HBM,HBQ1	-35068,2470,-945,-7818,6124
chr16:223737-224240	chr16	+	219685	219785	False	NM_000558,NM_000517,NM_001003938,NM_001077350	chr16,chr16,chr16,chr16	+,+,+,-	HBA1,HBA2,HBM,NPRL3	6893,3060,-3763,-31013
chr1:25740746-25740964	chr1	+	25740798	25740860	True	NM_020485,NM_138618,NM_138616,NM_138617,NM_018202	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	RHCE,RHCE,RHCE,RHCE,TMEM57	6553,6553,6553,6553,16527
chr8:103425227-103425790	chr8	+	103425355	103425688	True	NM_024410,NM_015902	chr8,chr8	+,-	ODF1,UBR5	138159,-438
chr10:114713019-114713230	chr10	+	114713178	114713254	True	NM_030756,NM_001146283,NM_001198531,NM_001198530,NM_001146284,NM_001146285,NM_001146286,NM_001198526,NM_001198527,NM_001198525,NM_022494,NM_001198528,NM_001198529,NM_001146274	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,+,+,+,+,+,-,+,+,+	TCF7L2,TCF7L2,TCF7L2,TCF7L2,TCF7L2,TCF7L2,TCF7L2,TCF7L2,TCF7L2,TCF7L2,ZDHHC6,TCF7L2,TCF7L2,TCF7L2	-3220,-3220,-3220,-3220,-3220,-3220,-3220,-3220,-3220,-3220,-506506,-3220,-3220,-3220
chr7:158379292-158379499	chr7	+	158379327	158379443	True	NM_130843,NM_130842,NM_018051,NM_002847	chr7,chr7,chr7,chr7	-,-,+,-	PTPRN2,PTPRN2,WDR60,PTPRN2	1089,1089,269825,1089
chr8:104918563-104920040	chr8	+	104918976	104919895	True	NM_014677,NM_030780	chr8,chr8	+,-	RIMS2,SLC25A32	-87623,-491508
chr9:91603673-91604329	chr9	+	91603860	91604303	True	NM_001001938,NM_016848,NM_001142413,NM_005226	chr9,chr9,chr9,chr9	+,-,+,+	C9orf47,SHC3,C9orf47,S1PR3	1474,189430,1474,2058
chr16:77458219-77459311	chr16	+	77458520	77459333	True	NM_001129979,NM_199355	chr16,chr16	+,-	SYCE1L,ADAMTS18	-225237,9728
chr4:187113198-187113638	chr4	+	187113290	187113662	True	NM_207352,NM_021069	chr4,chr4	+,-	CYP4V2,SORBS2	-667,-235420
chr12:132411356-132412392	chr12	+	132411882	132412378	True	NM_175066,NM_001002020,NM_025215,NM_001002019	chr12,chr12,chr12,chr12	-,+,+,+	DDX51,PUS1,PUS1,PUS1	216552,1366,1434,1419
chr19:21949718-21950214	chr19	+	21949844	21950230	True	NR_024523,NM_173531	chr19,chr19	+,-	LOC641367,ZNF100	-16348,250
chr6:70989273-70990094	chr6	+	70989417	70990125	True	NM_078485,NM_001105531	chr6,chr6	-,+	COL9A1,FAM135A	2836,132981
chrX:107226245-107228058	chrX	+	107226594	107227944	True	NM_001170553,NM_031273	chrX,chrX	+,-	VSIG1,TEX13B	60255,-994
chr4:922843-924240	chr4	+	923069	924241	True	NM_005255,NM_032326	chr4,chr4	-,+	GAK,TMEM175	1983,2020
chr3:62860989-62861243	chr3	+	62861010	62861158	True	NM_183394,NR_027104,NM_003716,NM_183393	chr3,chr3,chr3,chr3	-,+,-,-	CADPS,LOC285401,CADPS,CADPS	22,227205,22,22
chr17:57407023-57408122	chr17	+	57407117	57408008	True	NM_182620,NM_001005404	chr17,chr17	-,+	SKA2,YPEL2	-174317,1044
chr17:40829169-40829968	chr17	+	40829169	40830015	True	NM_016602,NM_024927,NM_003632	chr17,chr17,chr17	-,-,+	CCR10,PLEKHH3,CNTNAP1	3880,-121,4616
chr1:225637140-225637362	chr1	+	225637172	225637362	True	NM_194442,NM_001130440	chr1,chr1	-,+	LBR,SRP9	-20615,328152
chr16:75467023-75467335	chr16	+	75467151	75467321	True	NM_006324,NM_007285	chr16,chr16	-,+	CFDP1,GABARAPL2	116,132927
chr19:2389572-2389980	chr19	+	2389668	2390004	True	NM_182973,NM_012458	chr19,chr19	+,-	TMPRSS9,TIMM13	65,37921
chr19:19741062-19741864	chr19	+	19741292	19741648	True	NM_004720,NM_033204	chr19,chr19	-,+	LPAR2,ZNF101	-2253,38014
chr3:126236502-126236836	chr3	+	126236529	126236751	True	NM_152889,NM_001165974,NM_144639	chr3,chr3,chr3	+,-,-	CHST13,UROC1,UROC1	6424,-71,-71
chr15:44969537-44970128	chr15	+	44969536	44969948	True	NM_004048,NM_001145112	chr15,chr15	+,-	B2M,PATL2	33736,-450
chr1:40713469-40715102	chr1	+	40713484	40714835	True	NM_001008740,NM_005857,NM_001852	chr1,chr1,chr1	+,+,-	TMCO2,ZMPSTE24,COL9A2	38,8897,68161
chr2:136876898-136877271	chr2	+	136877053	136877310	True	NM_001008540,NM_003467,NM_014607	chr2,chr2,chr2	-,-,+	CXCR4,CXCR4,UBXN4	-3240,-1328,-377915
chr1:155659082-155659557	chr1	+	155659142	155659432	True	NM_001199849,NM_001198903,NM_001198899,NM_004632,NM_018253,NM_001198902,NM_033657,NM_001199851,NM_001199850,NM_139121,NM_001198900,NM_001198901,NM_139118,NM_139119,NM_001198904,NM_001198905,NM_001198906	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,+,-,-,+,+,+,-,-,-,-,-,-,-,-	DAP3,YY1AP1,YY1AP1,DAP3,YY1AP1,YY1AP1,DAP3,DAP3,DAP3,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1	-312,-695,-9522,-309,-574,-627,-309,-312,-312,-378,-574,-323,-319,-577,-695,-574,-319
chr1:155659082-155659557	chr1	+	155533297	155533410	False	NR_027023,NM_018489	chr1,chr1	+,-	LOC645676,ASH1L	-1577,-973
chr19:14640981-14641887	chr19	+	14641025	14641825	True	NR_038104,NR_030369,NM_138501,NM_006145,NR_038103	chr19,chr19,chr19,chr19,chr19	+,+,+,-,+	TECR,MIR639,TECR,DNAJB1,TECR	-697,-721,-697,-11824,-697
chr16:3704878-3705079	chr16	+	3704896	3705040	True	NM_005223,NM_032444	chr16,chr16	+,-	DNASE1,SLX4	-2007,-43311
chr3:46511016-46511637	chr3	+	46511023	46511393	True	NM_002343,NM_001199149,NM_031440	chr3,chr3,chr3	-,-,+	LTF,LTF,RTP3	-4425,-5862,28091
chr1:193074299-193074521	chr1	+	193074495	193074567	True	NM_197962,NM_024529,NM_016066	chr1,chr1,chr1	-,+,-	GLRX2,CDC73,GLRX2	39,16520,727
chr19:7742468-7742684	chr19	+	7742527	7742615	True	NM_001042461,NM_001193374,NM_174894,NM_174918,NM_002002,NM_020415,NM_001042462	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,-,+,+	TRAPPC5,RETN,TRAPPC5,C19orf59,FCER2,RETN,TRAPPC5	3148,-8607,3145,-636,24467,-8607,3091
chrX:16963919-16964352	chrX	+	16964027	16964377	True	NM_004726,NM_002893,NM_001080975	chrX,chrX,chrX	+,-,+	REPS2,RBBP7,REPS2	436,-75493,436
chr19:33716961-33717368	chr19	+	33717053	33717367	True	NM_002333,NM_019849	chr19,chr19	+,-	LRP3,SLC7A10	-31505,-297
chr17:44897022-44897243	chr17_ctg5_hap1	+	1664251	1664428	False	NR_033799,NM_016632	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	NSFP1,ARL17A	-139389,-150367
chr17:44897022-44897243	chr17	+	44897054	44897231	True	NM_003396,NM_030753	chr17,chr17	+,-	WNT9B,WNT3	31736,-972
chr1:225960287-225961696	chr1	+	225960299	225961735	True	NM_003133,NM_001130440,NM_014698	chr1,chr1,chr1	+,+,-	SRP9,SRP9,TMEM63A	3779,3779,108735
chr7:92772342-92774077	chr7	+	92772441	92773985	True	NM_024553,NM_152703	chr7,chr7	+,-	CCDC132,SAMD9L	87667,3745
chr1:120188743-120190001	chr1	+	120188850	120189819	True	NM_006623,NM_001080470	chr1,chr1	+,-	PHGDH,ZNF697	64599,621
chr3:194392960-194393197	chr3	+	194392960	194393240	True	NM_018385,NM_153690	chr3,chr3	-,+	LSG1,FAM43A	16,13381
chr19:52510367-52510919	chr19	+	52510518	52510966	True	NM_198480,NM_001199324,NM_024840	chr19,chr19,chr19	-,-,+	ZNF615,ZNF615,ZNF613	567,567,-79888
chr2:87035094-87035492	chr2	+	87035103	87035519	True	NM_001145873,NR_037931	chr2,chr2	-,+	CD8A,LOC100286979	50,53428
chr18:10699012-10699349	chr18	+	10699032	10699268	True	NM_003826,NM_022068	chr18,chr18	+,-	NAPG,FAM38B	-173210,449549
chr17:18381468-18382166	chr17	+	18381468	18382056	True	NR_003554,NM_001040078	chr17,chr17	-,+	LOC220594,LGALS9C	42560,-1420
chr17:18381468-18382166	chr17	-	20368894	20369349	False	NM_001190790,NM_001042685	chr17,chr17	+,-	CDRT15L2,LGALS9B	113687,1560
chr17:42142700-42143478	chr17	+	42142864	42143442	True	NR_028581,NR_028582,NM_138387,NM_152344	chr17,chr17,chr17,chr17	+,+,+,-	G6PC3,G6PC3,G6PC3,LSM12	4655,4655,4655,1595
chr22:41485996-41486330	chr22	+	41486015	41486108	True	NM_138481,NR_031694,NM_001429	chr22,chr22,chr22	-,+,+	CHADL,MIR1281,EP300	150878,2408,2505
chr20:37101007-37101294	chr20	+	37101025	37101339	True	NM_020336,NR_027241	chr20,chr20	+,-	RALGAPB,LOC388796	146,-37007
chr7:131350538-131350937	chr7	+	131350601	131350843	True	NM_005397,NM_013255	chr7,chr7	-,+	PODXL,MKLN1	-109225,-338064
chr2:121015611-121016388	chr2	+	121015681	121016395	True	NM_002881,NR_000034	chr2,chr2	+,-	RALB,TMEM185B	-5325,-34697
chrX:70587679-70588584	chrX	+	70587833	70588432	True	NM_001171162,NM_138923,NM_004606	chrX,chrX,chrX	-,+,+	ZMYM3,TAF1,TAF1	-112786,-1771,-1771
chr9:45357302-45358876	chr9	+	45357694	45357772	True	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-367509,-1726964
chr9:45357302-45358876	chr9	+	66494870	66494942	False	NR_024443,NR_024496	chr9,chr9	-,+	LOC100133920,LOC442421	536104,-652
chr9:45357302-45358876	chr9	-	68376704	68376776	False	NR_033907,NR_034006	chr9,chr9	-,+	LOC642236,LOC100132352	77649,349764
chr16:3768906-3770027	chr16	+	3769103	3769890	True	NM_005223,NM_016292	chr16,chr16	+,-	DNASE1,TRAP1	-66224,-1505
chr9:140123364-140123795	chr9	+	140123596	140123830	True	NM_001190228,NM_080877,NM_001177316,NM_001177317,NM_031297,NM_199001	chr9,chr9,chr9,chr9,chr9,chr9	+,+,+,+,-,+	LOC643596,SLC34A3,SLC34A3,SLC34A3,RNF208,C9orf169	-1629,1554,1378,1378,-7821,-4003
chr13:20767906-20768285	chr13	+	20768123	20768269	True	NM_004004,NM_001190965	chr13,chr13	-,+	GJB2,ZMYM2	-1009,-235208
chr17:25619717-25619956	chr17	+	25619896	25619964	True	NM_015626,NM_000625,NM_134265	chr17,chr17,chr17	+,-,+	WSB1,NOS2,WSB1	1141,507641,1141
chr14:21273115-21273810	chr14	+	21273386	21273859	True	NM_198232,NM_005615,NM_198234,NM_002933,NM_198235	chr14,chr14,chr14,chr14,chr14	-,+,-,-,-	RNASE1,RNASE6,RNASE1,RNASE1,RNASE1	-2828,-24234,-2350,-2350,-2350
chr19:39467008-39467621	chr19	+	39467087	39467631	True	NM_024907,NM_033363	chr19,chr19	-,+	FBXO17,MRPS12	-707,-45544
chr12:53165033-53165606	chr12	+	53165150	53165558	True	NM_199187,NM_015848	chr12,chr12	+,-	KRT18,KRT76	177096,5621
chr11:67982080-67982290	chr11	+	67982130	67982290	True	NM_017635,NM_002335,NM_016028	chr11,chr11,chr11	-,+,-	SUV420H1,LRP5,SUV420H1	-1346,97817,-1346
chr6:90011788-90012218	chr6	+	90011844	90012216	True	NM_014942,NM_002043	chr6,chr6	+,-	ANKRD6,GABRR2	130680,12801
chr9:37544913-37545863	chr9	+	37545082	37545862	True	NM_022490,NM_012166	chr9,chr9	+,-	POLR1E,FBXO10	-59189,30439
chr2:85789514-85790025	chr2	+	85789768	85789946	True	NM_003761,NM_001142269,NM_000821	chr2,chr2,chr2	+,-,-	VAMP8,GGCX,GGCX	14667,-1111,-1111
chr7:18067093-18067491	chr7	+	18067185	18067521	True	NM_001204144,NM_175886	chr7,chr7	+,-	HDAC9,PRPS1L1	59050,15
chr19:5679582-5680181	chr19	+	5679920	5680198	True	NM_205767,NM_198708,NM_198533,NM_198706,NM_198707,NM_198704,NM_198705	chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,+,+,+,+,+,+	C19orf70,HSD11B1L,HSD11B1L,HSD11B1L,HSD11B1L,HSD11B1L,HSD11B1L	763,876,848,876,853,836,836
chr16:87524750-87525309	chr16	+	87524993	87525175	True	NM_022818,NM_015144	chr16,chr16	+,-	MAP1LC3B,ZCCHC14	-99243,335
chr10:124906143-124906815	chr10	+	124906396	124906822	True	NM_001007793,NM_004725,NM_022466,NM_005519	chr10,chr10,chr10,chr10	+,+,-,+	BUB3,BUB3,IKZF5,HMX2	6937,6937,-138085,815
chr10:71175639-71176310	chr10	+	71175681	71176343	True	NM_001057,NM_012339	chr10,chr10	-,+	TACR2,TSPAN15	381,34882
chr19:32835783-32836363	chr19	+	32835798	32836326	True	NM_014910,NM_001136156,NM_032139	chr19,chr19,chr19	+,+,-	ZNF507,ZNF507,ANKRD27	187,187,329826
chr10:97452436-97453481	chr10	+	97452758	97453259	True	NM_001143973,NM_001098175,NM_015631	chr10,chr10,chr10	-,+,-	TCTN3,ENTPD1,TCTN3	692,18276,692
chr12:114847058-114847313	chr12	+	114847202	114847310	True	NM_181486,NM_080718,NM_000192,NM_080717,NM_138432	chr12,chr12,chr12,chr12,chr12	-,-,-,-,+	TBX5,TBX5,TBX5,TBX5,SDSL	-3313,-5499,-955,-955,-987037
chr16:86774093-86774559	chr16	+	86774176	86774497	True	NM_005250,NR_027490	chr16,chr16	+,-	FOXL1,MTHFSD	-162112,-185335
chr17:40685130-40686732	chr17	+	40685516	40686165	True	NM_000263,NM_013290	chr17,chr17	+,-	NAGLU,PSMC3IP	1785,43639
chr6:76207291-76209243	chr6	+	76207599	76209283	True	NM_015687,NM_001100409	chr6,chr6	-,+	FILIP1,SENP6	-4103,102338
chr14:98444925-98445243	chr14	+	98444994	98445188	True	NR_015430,NM_182560	chr14,chr14	-,+	C14orf64,C14orf177	-533,732761
chr2:23609052-23609498	chr2	+	23609200	23609282	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	540702,-954
chr7:750989-751204	chr7	+	751007	751185	True	NM_001164762,NM_002735,NM_001164761,NM_017802	chr7,chr7,chr7,chr7	-,-,-,+	PRKAR1B,PRKAR1B,PRKAR1B,HEATR2	1442,1026,1709,15152
chr14:105488106-105489649	chr14	+	105488160	105489669	True	NM_017955,NM_174891,NM_145701	chr14,chr14,chr14	-,+,-	CDCA4,C14orf79,CDCA4	-735,-35595,-735
chr2:220251810-220252069	chr2	+	220251811	220252087	True	NM_012100,NM_001927	chr2,chr2	-,+	DNPEP,DES	625,31011
chr3:151485691-151487495	chr3	+	151485936	151487238	True	NR_026915,NM_178822	chr3,chr3	+,-	LOC201651,IGSF10	1005,-309439
chr1:36277448-36278730	chr1	+	36277487	36278736	True	NM_017629,NM_022111	chr1,chr1	+,-	EIF2C4,CLSPN	-3724,-41936
chr22:24400567-24402425	chr22	+	24400723	24402349	True	NR_003082,NM_012295,NM_001201429,NM_001199281	chr22,chr22,chr22,chr22	-,+,+,+	GSTTP2,CABIN1,CABIN1,CABIN1	192,5415,5415,5470
chr22:24400567-24402425	chr22	+	24346170	24347209	False	NR_003081,NM_000854	chr22,chr22	-,+	GSTTP1,GSTT2	100,-23907
chr3:119295747-119297482	chr3	+	119295906	119297335	True	NM_005191,NM_001125	chr3,chr3	-,+	CD80,ADPRH	-17425,1187
chr19:57791317-57791679	chr19	+	57791370	57791692	True	NM_001012729,NM_006635	chr19,chr19	-,+	DUXA,ZNF460	-112514,160
chr18:11910949-11911400	chr18	+	11911008	11911150	True	NM_023075,NM_020412	chr18,chr18	-,+	MPPE1,CHMP1B	-2367,-59670
chr1:95697760-95698328	chr1	+	95698083	95698348	True	NR_037643,NM_001199682,NM_015485,NM_001128142,NM_144988	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	RWDD3,RWDD3,RWDD3,RWDD3,ALG14	1362,1362,1362,1362,-159576
chrX:134044951-134046595	chrX	+	134045162	134046040	True	NM_019556,NM_001163438	chrX,chrX	-,+	MOSPD1,LOC644538	3309,78927
chr3:119012716-119012938	chr3	+	119012771	119012874	True	NM_212543,NM_020754	chr3,chr3	-,+	B4GALT4,ARHGAP31	-53019,345
chr12:54815186-54816253	chr12	+	54815529	54816277	True	NM_005337,NM_002205	chr12,chr12	+,-	NCKAP1L,ITGA5	75217,-2479
chr16:23763880-23764618	chr16	+	23763882	23764450	True	NM_033266,NM_022097	chr16,chr16	-,+	ERN2,CHP2	-39061,1497
chr8:143857503-143857930	chr8	+	143857506	143857760	True	NM_177477,NM_177476,NM_177457,NM_016647,NM_177458,NM_023946	chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,+,-,-	LYNX1,LYNX1,LYNX1,C8orf55,LYNX1,LYNX1	1034,727,1930,-48936,-6260,1929
chr22:30958547-30958840	chr22	+	30958677	30958833	True	NM_004861,NM_000355	chr22,chr22	-,+	GAL3ST1,TCN2	2093,44236
chr10:102267769-102269214	chr10	+	102268004	102269084	True	NM_017902,NM_015490	chr10,chr10	+,-	HIF1AN,SEC31B	26556,10561
chr7:97499816-97501284	chr7	+	97499878	97501329	True	NM_133436,NM_183356,NM_001178076,NM_001178077,NM_001178075,NM_001673,NM_013998	chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,-,+	ASNS,ASNS,ASNS,ASNS,ASNS,ASNS,TAC1	198,575,575,198,575,575,-138658
chr4:88525871-88526958	chr4	+	88526085	88526791	True	NM_014208,NM_004684	chr4,chr4	+,-	DSPP,SPARCL1	2889,-75430
chr14:96000439-96000682	chr14	+	96000601	96000697	True	NM_016417,NR_003002,NR_003138,NR_001459	chr14,chr14,chr14,chr14	+,-,-,-	GLRX5,SCARNA13,SNHG10,SNHG10	625,-635,562,562
chr17:43325517-43325782	chr17	+	43325540	43325716	True	NR_024434,NM_152343	chr17,chr17	+,-	LOC100133991,C17orf46	-288,13813
chr7:50800005-50801399	chr7	+	50800110	50801294	True	NM_001001549,NM_005311,NR_033845	chr7,chr7,chr7	-,-,+	GRB10,GRB10,LOC100129427	-60,-60,-200705
chr4:187645934-187646134	chr4	+	187645939	187646143	True	NM_000128,NM_005245	chr4,chr4	+,-	F11,FAT1	-458872,-952
chr7:153583709-153583928	chr7	+	153583777	153583865	True	NM_005431,NM_001039350	chr7,chr7	-,+	XRCC2,DPP6	-1210527,553
chr17:45772443-45772717	chr17	+	45772535	45772763	True	NM_014726,NM_145798	chr17,chr17	+,-	TBKBP1,OSBPL7	40,126434
chr15:64385365-64385694	chr15	+	64385399	64385595	True	NM_032231,NM_148955,NM_001014812,NM_003099,NM_152826	chr15,chr15,chr15,chr15,chr15	-,+,-,+,+	FAM96A,SNX1,FAM96A,SNX1,SNX1	662,2581,662,2581,2581
chr3:169379240-169379501	chr3	+	169379239	169379435	True	NM_001205194,NM_004991,NM_001185118	chr3,chr3,chr3	-,-,+	MECOM,MECOM,MYNN	2178,2178,111417
chr17:18221082-18221808	chr17	+	18221110	18221600	True	NM_004618,NM_144775	chr17,chr17	-,+	TOP3A,SMCR8	-2789,-2567
chr9:22447296-22447522	chr9	+	22447328	22447472	True	NM_022160,NM_078487	chr9,chr9	+,-	DMRTA1,CDKN2B	-539,-438016
chr19:53836434-53836794	chr19	+	53836591	53836843	True	NM_138374,NM_033341	chr19,chr19	+,-	ZNF845,BIRC8	158,-41716
chr15:83226596-83228242	chr15	+	83226701	83228063	True	NM_001079533,NR_033579	chr15,chr15	-,+	CPEB1,LOC440297	12560,-96719
chr12:2984317-2985017	chr12	+	2984481	2984886	True	NM_202003,NM_202002,NR_027365,NR_027363,NM_021953,NR_027364	chr12,chr12,chr12,chr12,chr12,chr12	-,-,+,+,-,+	FOXM1,FOXM1,C12orf32,C12orf32,FOXM1,C12orf32	1480,1480,1478,1478,1480,1478
chr8:110552626-110553823	chr8	+	110552855	110553864	True	NM_004215,NM_198120,NM_001099756	chr8,chr8,chr8	+,+,-	EBAG9,EBAG9,SYBU	-596,-977,101606
chr7:76106292-76108151	chr7	+	76106369	76108159	True	NR_003262,NM_001102596	chr7,chr7	-,+	FDPSL2A,DTX2	-2052,1667
chr7:76106292-76108151	chr7	+	76604466	76606264	False	NR_023383,NM_006682	chr7,chr7	+,-	PMS2P11,FGL2	3874,222936
chr17:29062557-29063284	chr17	+	29062663	29062928	True	NM_015986,NR_024187	chr17,chr17	-,+	CRLF3,SUZ12P	88900,-26094
chr17:29062557-29063284	chr17	+	30268063	30268122	False	NM_018428,NM_015355	chr17,chr17	-,+	UTP6,SUZ12	-39334,-4077
chr5:76743997-76744410	chr5	+	76744055	76744421	True	NM_003719,NM_018268	chr5,chr5	+,-	PDE8B,WDR41	-237400,43961
chr2:197036156-197036420	chr2	+	197036204	197036322	True	NM_001080539,NM_004226	chr2,chr2	+,-	CCDC150,STK17B	468033,64
chr18:77798253-77799550	chr18	+	77798414	77799578	True	NM_024805,NM_001171967,NM_006701	chr18,chr18,chr18	+,+,-	RBFA,RBFA,TXNL4A	-4120,-4120,-49882
chr17:5137488-5137726	chr17	+	5137643	5137741	True	NM_207103,NR_034082	chr17,chr17	-,+	C17orf87,LOC100130950	392,-42315
chr2:170679190-170680970	chr2	+	170679261	170680914	True	NM_172070,NM_014168	chr2,chr2	+,-	UBR3,METTL5	3103,489
chr9:4116539-4117363	chr9	+	4116538	4117314	True	NR_026663,NM_152629	chr9,chr9	+,-	C9orf70,GLIS3	-217950,34919
chr5:65440140-65440360	chr5	+	65440192	65440320	True	NR_028474,NM_001077199,NM_139168	chr5,chr5,chr5	-,+,+	LOC100303749,SREK1,SREK1	-198791,-158,342
chr11:8980411-8982319	chr11	+	8980593	8982139	True	NM_182901,NM_020644	chr11,chr11	+,-	C11orf17,TMEM9B	-47843,3911
chr17:7460188-7460701	chr17	+	7460227	7460483	True	NM_172087,NM_003808,NM_003809,NR_037926,NM_172089,NM_172088,NM_006942,NM_001198624,NM_015670,NM_001198623,NM_001198622,NR_037146	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,+,-,+,+,+,+,+	TNFSF13,TNFSF13,TNFSF12,SENP3-EIF4A1,TNFSF12-TNFSF13,TNFSF13,SOX15,TNFSF13,SENP3,TNFSF13,TNFSF13,TNFSF12	1125,1125,-7903,4825,-7903,1125,33055,1125,4825,1125,1125,-7903
chr5:1634915-1635141	chr5	+	1634962	1635024	True	NR_003713,NM_004553	chr5,chr5	-,+	LOC728613,NDUFS6	-842,166471
chr6:10430893-10432789	chr6	+	10430979	10432548	True	NR_033910,NR_027793	chr6,chr6	+,-	LOC100130275,C6orf218	-18479,2566
chr20:62324617-62325735	chr20	+	62325326	62325766	True	NM_001134758,NM_003823	chr20,chr20	-,+	ARFRP1,TNFRSF6B	13639,2237
chr2:20846698-20847631	chr2	+	20846778	20847588	True	NM_022460,NM_182828	chr2,chr2	-,+	HS1BP3,GDF7	3326,18835
chr7:66460764-66461331	chr7	+	66460764	66460834	True	NM_018264,NM_016038	chr7,chr7	+,-	TYW1,SBDS	982,-176
chr7:66460764-66461331	chr7	-	72299807	72299857	False	NR_001588,NR_024110,NR_024111,NR_024109,NM_001145441,NM_001145440	chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,-,-	SBDSP1,SBDSP1,SBDSP1,SBDSP1,TYW1B,TYW1B	94,94,94,94,-994,-994
chr16:72043376-72043604	chr16	+	72043470	72043537	True	NM_001361,NM_181536	chr16,chr16	+,-	DHODH,PKD1L3	-883,-9593
chr17:79337483-79338199	chr17	+	79337787	79338083	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	35456,-33313
chr17:43339495-43339806	chr17	+	43339587	43339840	True	NR_024435,NM_152343	chr17,chr17	+,-	LOC100133991,C17orf46	-80,-108
chr19:33573864-33574874	chr19	+	33574212	33574729	True	NM_033103,NM_018025	chr19,chr19	-,+	RHPN2,GPATCH1	-18388,-2477
chr16:14424351-14425521	chr16	+	14424594	14425317	True	NR_029854,NM_001134477	chr16,chr16	+,-	MIR365-1,PARN	-21513,298853
chr10:51623767-51624571	chr10	+	51623982	51624515	True	NM_001145262,NM_006327	chr10,chr10	+,-	NCOA4,TIMM23	-47748,-646
chr10:51623767-51624571	chr10	-	51370239	51370772	False	NR_029388,NM_003631,NM_002443	chr10,chr10,chr10	-,-,+	LOC728407,PARG,MSMB	594,609,178780
chr2:31031753-31033132	chr2	+	31031907	31033167	True	NM_144575,NM_001002257	chr2,chr2	-,+	CAPN13,LCLAT1	-1596,-361821
chr5:154322789-154323431	chr5	+	154322992	154323090	True	NM_001014990,NM_015465,NM_014180	chr5,chr5,chr5	+,-,+	MRPL22,GEMIN5,MRPL22	-2410,-5216,-2410
chr16:188707-189059	chr16	+	188773	188927	True	NM_001039476,NM_001077350,NM_005332	chr16,chr16,chr16	-,-,+	NPRL3,NPRL3,HBZ	-163,-101,13926
chr12:120556205-120556929	chr12	+	120556222	120556932	True	NM_006861,NM_207311,NM_001167606	chr12,chr12,chr12	-,+,-	RAB35,CCDC64,RAB35	-1579,-128626,-1579
chr1:161135826-161136143	chr1	+	161135871	161136129	True	NM_000309,NM_001199873,NM_012475,NM_001014443,NM_001122764	chr1,chr1,chr1,chr1,chr1	+,-,+,+,+	PPOX,B4GALT3,USP21,USP21,PPOX	51,11679,-6668,-6668,51
chr1:110034300-110035277	chr1	+	110034471	110035231	True	NM_020703,NM_153340,NM_001134403,NM_001134402,NM_182580,NM_001134404,NM_001134400	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,+,+,+,+	AMIGO1,ATXN7L2,CYB561D1,CYB561D1,CYB561D1,CYB561D1,CYB561D1	17155,-7962,1469,1426,1469,1469,1469
chr10:134901008-134901210	chr10	+	134901030	134901236	True	NM_173572,NM_001083909	chr10,chr10	-,+	C10orf93,GPR123	-144941,172
chr17:42273387-42273629	chr17	+	42273386	42273564	True	NM_024107,NM_001098833,NM_178542,NM_001076674,NM_020218,NM_177441	chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,+,-,+	TMUB2,ATXN7L3,C17orf65,TMUB2,ATXN7L3,TMUB2	-9083,2018,-9304,-9083,2018,-8863
chr18:77712433-77712694	chr18	+	77712432	77712492	True	NM_001136180,NM_001146343,NM_001146345,NM_025078	chr18,chr18,chr18,chr18	+,-,-,-	HSBP1L1,PQLC1,PQLC1,PQLC1	12089,-779,-779,-779
chr20:33424277-33424853	chr20	+	33424376	33424883	True	NR_002165,NR_028046	chr20,chr20	-,+	HMGB3P1,ACSS2	-2111,37882
chr10:5929597-5930174	chr10	+	5929668	5930220	True	NM_019046,NM_001009941,NM_178150,NM_001009943,NM_032807	chr10,chr10,chr10,chr10,chr10	-,-,+,-,+	ANKRD16,ANKRD16,FBXO18,ANKRD16,FBXO18	1690,1690,1993,1690,6128
chr22:45634878-45636015	chr22	+	45634898	45635816	True	NM_001009880,NM_001167574	chr22,chr22	-,+	KIAA0930,UPK3A	884,45051
chr15:52122578-52124099	chr15	+	52122595	52124097	True	NM_014547,NM_001143917	chr15,chr15	+,-	TMOD3,LYSMD2	-823,-78945
chr1:9008062-9008748	chr1	+	9008201	9008756	True	NM_001215,NM_001428	chr1,chr1	+,-	CA6,ENO1	-2330,-69050
chr3:193930024-193930328	chr3	+	193930032	193930358	True	NR_024480,NM_005524	chr3,chr3	-,+	LOC100131551,HES1	100285,-76159
chr17:5365161-5365503	chr17	+	5365161	5365256	True	NM_001199699,NM_020162,NM_024039	chr17,chr17,chr17	-,-,+	DHX33,DHX33,MIS12	7181,7181,24990
chr17:5365161-5365503	chr17	-	5293133	5293206	False	NM_002532,NM_001160243	chr17,chr17	-,+	NUP88,RPAIN	29915,29754
chr2:136738992-136739884	chr2	+	136739022	136739735	True	NM_001349,NM_014607	chr2,chr2	-,+	DARS,UBXN4	3545,-239885
chrX:132550010-132550229	chrX	+	132550013	132550275	True	NM_001101357,NM_001448	chrX,chrX	+,-	CCDC160,GPC4	820801,-808
chr12:63326708-63327098	chr12	+	63326837	63327105	True	NR_029661,NM_020700	chr12,chr12	+,-	MIRLET7I,PPM1H	-329423,1610
chr22:20847211-20847788	chr22	+	20847283	20847786	True	NM_001003891,NR_033825,NM_032775	chr22,chr22,chr22	+,-,-	MED15,KLHL22,KLHL22	14099,2435,2435
chr21:48018954-48020098	chr21	+	48018985	48020117	True	NM_001535	chr21	+	PRMT2	35409
chr6:41840104-41840352	chr6	+	41840175	41840251	True	NM_018561,NM_004053	chr6,chr6	-,+	USP49,BYSL	22898,48713
chr17:43046405-43046895	chr17	+	43046515	43046878	True	NM_213607,NM_006688	chr17,chr17	+,-	CCDC103,C1QL1	-69412,-871
chr17:16320645-16321122	chr17	+	16320849	16321071	True	NM_016113,NM_181716	chr17,chr17	+,-	TRPV2,CENPV	-2044,-64037
chr7:66461814-66462036	chr7	+	66461878	66461960	True	NM_018264,NM_016038	chr7,chr7	+,-	TYW1,SBDS	-112,-1290
chr19:34012055-34012291	chr19	+	34012060	34012298	True	NM_001166057,NM_000285,NM_001166056,NM_001127895	chr19,chr19,chr19,chr19	-,-,-,+	PEPD,PEPD,PEPD,CHST8	551,551,551,100562
chr2:219725719-219726042	chr2	+	219725745	219726063	True	NM_017431,NM_006522	chr2,chr2	-,+	PRKAG3,WNT6	-29233,-1250
chr3:57191762-57193368	chr3	+	57191853	57193347	True	NM_012096,NM_017563	chr3,chr3	+,-	APPL1,IL17RD	68417,6113
chr17:34991830-34992324	chr17	+	34991963	34992203	True	NM_024864,NM_001033580	chr17,chr17	+,-	MRM1,MYO19	-33989,-100658
chr13:51660702-51662106	chr13	+	51660858	51661976	True	NR_003923,NM_145019	chr13,chr13	-,+	GUCY1B2,FAM124A	-20565,134530
chr10:30900350-30901237	chr10	+	30900975	30901183	True	NM_183058,NM_005204	chr10,chr10	-,+	LYZL2,MAP3K8	17514,-178160
chr3:27488465-27489679	chr3	+	27488671	27489413	True	NM_003615,NM_182523	chr3,chr3	-,+	SLC4A7,CMC1	8889,793710
chr21:15888803-15889500	chr21	+	15889052	15889518	True	NR_003087,NM_022136	chr21,chr21	+,-	ABCC13,SAMSN1	-242989,29209
chrX:21677024-21677393	chrX	+	21677344	21677438	True	NM_015884,NM_153270	chrX,chrX	+,-	MBTPS2,KLHL34	180217,-896
chr14:98602516-98604104	chr14	+	98602735	98604038	True	NR_015430,NM_182560	chr14,chr14	-,+	C14orf64,C14orf177	-158274,573911
chr6:107073929-107075718	chr6	+	107074047	107075566	True	NM_032730,NM_018292	chr6,chr6	-,+	RTN4IP1,QRSL1	1862,1874
chr19:49926009-49926481	chr19	+	49926083	49926237	True	NM_001195256,NM_178449	chr19,chr19	+,-	LOC645971,PTH2	3450,511
chr3:11196863-11197278	chr3	+	11196939	11197257	True	NM_001098212,NR_027102	chr3,chr3	+,-	HRH1,LOC285370	-776,-391062
chr6:42689646-42690088	chr6	+	42689899	42690099	True	NM_000322,NR_037141	chr6,chr6	-,+	PRPH2,LOC442211	309,5214
chr7:65009228-65009558	chr7	+	65009356	65009456	True	NM_000181,NR_027392	chr7,chr7	-,+	GUSB,INTS4L2	437901,103320
chr7:65009228-65009558	chr7	-	64611803	64611903	False	NR_027393,NM_001007253	chr7,chr7	+,-	INTS4L1,ERV3	-10257,-144679
chr7:65009228-65009558	chr7	-	65123024	65123124	False	NM_000181,NR_027392	chr7,chr7	-,+	GUSB,INTS4L2	324229,-10304
chr7:65009228-65009558	chr11	+	77668605	77668705	False	NM_003251,NM_033547	chr11,chr11	+,-	THRSP,INTS4	106201,37068
chr5:68929858-68930419	chr5	+	68929865	68929927	True	NR_027439,NM_001042490	chr5,chr5	-,+	LOC100272216,GTF2H2D	-837,-73842
chr5:68929858-68930419	chr5	-	69196891	69196953	False	NM_022968,NR_027386	chr5,chr5	+,-	SERF1A,GUSBP3	124118,-190619
chr5:68929858-68930419	chr5	-	70071957	70072019	False	NM_022968,NR_034021	chr5,chr5	+,-	SERF1A,SMA5	124470,-190408
chr5:68929858-68930419	chr5	+	69784408	69786382	False	NR_033417,NR_033968	chr5,chr5	+,-	GTF2H2B,LOC100049076	-74364,65634
chr5:68929858-68930419	chr5	+	69805981	69807663	False	NR_033417,NR_033968	chr5,chr5	+,-	GTF2H2B,LOC100049076	-94835,44341
chr12:10983540-10984334	chr12	+	10983603	10984355	True	NM_005042,NM_023921	chr12,chr12	+,-	PRH2,TAS2R10	97478,-4735
chr8:12052268-12052483	chr8	+	12052408	12052468	True	NM_001083537,NR_003494,NR_027425	chr8,chr8,chr8	-,-,+	FAM86B1,FAM86B1,FAM66D	-784,-784,-79168
chr16:55514351-55514631	chr16	+	55514422	55514678	True	NM_001127891,NM_001025194,NM_004530	chr16,chr16,chr16	+,-,+	MMP2,CES1,MMP2	795,352447,-1392
chr7:63506052-63506633	chr7	+	63506170	63506338	True	NM_178558,NM_001159522	chr7,chr7	-,+	ZNF680,ZNF727	517217,-400
chr10:44881205-44881564	chr10	+	44881208	44881572	True	NM_001178134,NM_000609,NM_199168,NR_033846,NM_001033886	chr10,chr10,chr10,chr10,chr10	-,-,-,+,-	CXCL12,CXCL12,CXCL12,LOC283033,CXCL12	-663,-663,-663,-476507,-663
chr20:22564509-22565073	chr20	+	22564547	22564928	True	NM_021784,NM_153675,NR_001558,NM_001052	chr20,chr20,chr20,chr20	-,-,-,+	FOXA2,FOXA2,NCRNA00261,SSTR4	223,1223,-5267,451128
chrX:47522557-47524499	chrX	+	47523328	47524542	True	NM_004182,NR_027444,NM_153477,NR_028119	chrX,chrX,chrX,chrX	-,+,-,+	UXT,LOC100133957,UXT,LOC100133957	-4768,-5138,-4812,-5158
chrX:125685716-125685918	chrX	+	125685874	125685948	True	NM_001122716,NM_178470	chrX,chrX	+,-	CXorf64,DCAF12L1	267798,944
chr16:28503201-28503445	chr16	+	28503336	28503478	True	NM_001042432,NM_018690,NM_000086	chr16,chr16,chr16	-,+,-	CLN3,APOBR,CLN3	195,2514,-25
chr18:52255729-52256843	chr18	+	52255730	52256861	True	NM_173629,NM_001143829	chr18,chr18	+,-	C18orf26,CCDC68	1528,368468
chr17:36609000-36609739	chr17	+	36609111	36609477	True	NM_001004334,NM_001199417	chr17,chr17	-,+	GPR179,ARHGAP23	-109418,-24443
chr20:56135826-56136208	chr20	+	56135831	56136251	True	NM_080618,NM_002591	chr20,chr20	-,+	CTCFL,PCK1	-35677,71
chr12:91551564-91552612	chr12	+	91551938	91552391	True	NM_133504,NR_027932	chr12,chr12	-,+	DCN,CLLU1	20001,1262915
chr10:75401378-75402083	chr10	+	75401465	75401820	True	NM_021245,NM_024875,NM_004922	chr10,chr10,chr10	-,-,+	MYOZ1,SYNPO2L,SEC24C	50,9018,102310
chr1:57370842-57372008	chr1	+	57370993	57372019	True	NM_000562,NM_000066	chr1,chr1	+,-	C8A,C8B	-50601,59719
chr17:5033588-5034394	chr17	+	5033677	5033998	True	NM_014519,NM_004505	chr17,chr17	-,+	ZNF232,USP6	-7280,-2042
chr5:138675504-138676186	chr5	+	138675635	138676225	True	NM_016480,NM_001033112,NM_005847	chr5,chr5,chr5	+,+,-	PAIP2,PAIP2,SLC23A1	1293,1908,42864
chr17:44895850-44896127	chr17_ctg5_hap1	+	1663060	1663286	False	NR_033799,NM_016632	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	NSFP1,ARL17A	-138198,-149176
chr17:44895850-44896127	chr17	+	44895863	44896089	True	NM_003396,NM_030753	chr17,chr17	+,-	WNT9B,WNT3	32878,43
chr7:141730396-141730726	chr7	+	141730433	141730767	True	NM_004668,NM_176817	chr7,chr7	+,-	MGAM,TAS2R38	-34806,-56860
chr3:101444190-101444907	chr3	+	101444205	101444916	True	NM_000986,NM_024548	chr3,chr3	-,+	RPL24,CEP97	-38642,-762
chr1:219783180-219784810	chr6	-	66013411	66014396	False	NR_026540,NM_198283	chr6,chr6	+,-	MCART3P,EYS	483375,275351
chr1:219783180-219784810	chr1	+	219783202	219784550	True	NM_138794,NM_018713	chr1,chr1	+,-	LYPLAL1,SLC30A10	-436061,317493
chr1:151880868-151881858	chr1	+	151880904	151881797	True	NR_024237,NM_053055	chr1,chr1	+,-	LOC100132111,THEM4	-70010,614
chr5:54583151-54583925	chr5	+	54583326	54583507	True	NM_015360,NM_019030	chr5,chr5	+,-	SKIV2L2,DHX29	20068,20064
chr1:145244764-145245657	chr1	+	145244813	145245189	True	NM_203458,NM_022359	chr1,chr1	+,-	NOTCH2NL,PDE4DIP	-35763,-168627
chr1:145244764-145245657	chr1	-	120576245	120576621	False	NM_024408,NM_001100910	chr1,chr1	-,+	NOTCH2,FAM72B	35756,262383
chr14:105530829-105531179	chr14	+	105531021	105531137	True	NM_174891,NM_013345	chr14,chr14	+,-	C14orf79,GPR132	-78456,667
chr4:13429362-13429808	chr4	+	13429368	13429552	True	NM_001017979,NR_003132	chr4,chr4	-,+	RAB28,HSP90AB2P	56487,-94382
chr20:62479720-62479978	chr20	+	62479871	62479997	True	NM_080622,NM_025224	chr20,chr20	+,-	ABHD16B,ZBTB46	12568,-43015
chr19:3728160-3728609	chr19	+	3728268	3728542	True	NM_014428,NM_012398	chr19,chr19	+,-	TJP3,PIP5K1C	31,-27791
chr22:35877183-35878349	chr22	+	35877239	35878388	True	NM_005368,NM_014310	chr22,chr22	-,+	MB,RASD2	135047,58963
chr3:13692260-13692969	chr3	+	13692375	13692863	True	NM_004625,NR_027103	chr3,chr3	-,+	WNT7A,LOC285375	228805,-218
chr16:19566292-19566698	chr16	+	19566314	19566746	True	NM_020314,NM_016641	chr16,chr16	+,-	C16orf62,GDE1	-10,-32864
chr14:91716872-91717343	chr14	+	91716880	91717370	True	NM_001177676,NR_003709,NM_003485	chr14,chr14,chr14	-,+,-	GPR68,SNORA11B,GPR68	-6028,-124162,2904
chr10:6353634-6354097	chr10	+	6353743	6353977	True	NM_004566,NM_000417	chr10,chr10	+,-	PFKFB3,IL2RA	-108955,-249410
chr1:48430509-48431220	chr1	+	48430584	48431046	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	31566,257310
chr12:7849960-7850589	chr12	+	7850010	7850432	True	NM_199286,NM_020634	chr12,chr12	+,-	DPPA3,GDF3	13656,-1650
chr14:75531291-75531634	chr14	+	75531507	75531661	True	NM_203488,NM_001042430,NM_001107,NM_024643	chr14,chr14,chr14,chr14	-,+,-,+	ACYP1,FAM164C,ACYP1,FAM164C	-771,4637,-771,4637
chr10:43946095-43947104	chr10	+	43946094	43946383	True	NR_026693,NM_001098204	chr10,chr10	+,-	ZNF487P,HNRNPF	-13576,-41398
chr5:53661953-53662402	chr5	+	53662172	53662274	True	NM_006308,NM_019087	chr5,chr5	+,-	HSPB3,ARL15	89156,-55769
chr7:156803749-156804275	chr7	+	156803769	156804239	True	NM_005515,NM_138400,NM_001165255	chr7,chr7,chr7	-,+,-	MNX1,NOM1,MNX1	-422,-61403,-1640
chr17:15371518-15372643	chr17	+	15371610	15372634	True	NM_001204477,NM_001130842	chr17,chr17	-,+	CDRT4,ZNF286A	-685,230256
chr6:44320175-44320740	chr6	+	44320257	44320788	True	NM_145026,NM_020745	chr6,chr6	+,-	SPATS1,AARS2	-9915,-39194
chr22:50746107-50746332	chr22	+	50746291	50746351	True	NM_012401,NM_014678	chr22,chr22	-,+	PLXNB2,PPP6R2	-289,35408
chrX:47441904-47442723	chrX	+	47441945	47442647	True	NM_006950,NM_003254	chrX,chrX	-,+	SYN1,TIMP1	36661,-306
chr2:106014602-106014877	chr2	+	106014602	106014850	True	NM_001450,NM_201555,NM_001039492,NM_024093	chr2,chr2,chr2,chr2	-,-,-,+	FHL2,FHL2,FHL2,C2orf49	881,881,775,-60645
chr6:146058213-146060100	chr6	+	146058283	146060066	True	NM_005670,NM_000838,NM_001018041	chr6,chr6,chr6	-,+,-	EPM2A,GRM1,EPM2A	-1292,288715,-1292
chr5:127417772-127418321	chr5	+	127418085	127418361	True	NR_015360,NM_001046	chr5,chr5	-,+	FLJ33630,SLC12A2	457,1121
chr17:10293634-10295519	chr17	+	10293785	10295503	True	NM_003802,NM_020233	chr17,chr17	-,+	MYH13,C17orf48	-17463,305423
chr2:95526102-95526537	chr2	+	95526265	95526549	True	NR_003366,NM_144705	chr2,chr2	-,+	ANKRD20A8P,TEKT4	-3445,10682
chr16:608843-609101	chr16	+	608880	609014	True	NM_176677,NM_145270,NR_024121	chr16,chr16,chr16	+,+,-	NHLRC4,C16orf11,NCRNA00235	8017,1407,-31473
chr20:39655640-39656168	chr20	+	39655671	39656045	True	NM_015035,NM_003286	chr20,chr20	-,+	ZHX3,TOP1	272744,1416
chr7:6143266-6143491	chr7	+	6143469	6143531	True	NM_032172,NM_014413	chr7,chr7	+,-	USP42,EIF2AK1	1018,-44609
chr5:147275257-147275473	chr5	+	147275261	147275460	True	NM_054023,NM_206966	chr5,chr5	+,-	SCGB3A2,C5orf46	-17038,10692
chr10:105675560-105676842	chr10	+	105675841	105676848	True	NM_024928,NM_014720	chr10,chr10	-,+	OBFC1,SLK	1247,50621
chr1:36622686-36622905	chr1	+	36622867	36622935	True	NM_014408,NM_018067	chr1,chr1	-,+	TRAPPC3,MAP7D1	-7800,-1115
chr5:68789245-68789473	chr5	+	68789309	68789445	True	NM_002538,NM_001205254,NM_001015892	chr5,chr5,chr5	+,+,-	OCLN,OCLN,TAF9	-1241,-770,-123469
chr13:48888043-48888859	chr13	+	48888389	48888506	True	NM_000321,NM_001162498	chr13,chr13	+,-	RB1,LPAR6	-10570,99210
chr19:35168973-35169260	chr19	+	35168972	35169041	True	NM_018443,NM_001012320,NM_001025591	chr19,chr19,chr19	+,+,-	ZNF302,ZNF302,SCGBL	-456,-456,-83482
chr11:71844463-71845722	chr11	+	71844475	71845594	True	NM_014042,NM_000804	chr11,chr11	-,+	C11orf51,FOLR3	-20653,1176
chr14:24659875-24660230	chr14	+	24659878	24660052	True	NM_024658,NM_006405,NM_001014842,NM_001184739	chr14,chr14,chr14,chr14	-,-,-,+	IPO4,TM9SF1,TM9SF1,TSSK4	-1754,4880,4880,14873
chr8:144294210-144294484	chr8	+	144294361	144294521	True	NM_178172,NM_001130478	chr8,chr8	+,-	GPIHBP1,LY6H	546,-52308
chr4:123661282-123661744	chr4	+	123661557	123661780	True	NM_001178007,NM_152618,NR_024041	chr4,chr4,chr4	+,+,-	BBS12,BBS12,CETN4P	-7754,-7754,-7944
chr12:93964708-93964930	chr12	+	93964752	93964850	True	NM_003877,NM_003348	chr12,chr12	+,-	SOCS2,UBE2N	-1205,-128726
chr13:110957685-110958359	chr13	+	110957720	110958361	True	NM_001845,NM_001846	chr13,chr13	-,+	COL4A1,COL4A2	1185,1269
chr14:36770556-36771552	chr14	+	36770602	36771405	True	NM_001144891,NM_006194	chr14,chr14	-,+	MBIP,PAX9	18538,355367
chr6:64003456-64004046	chr6	+	64003503	64003937	True	NM_001143940,NM_003463	chr6,chr6	-,+	LGSN,PTP4A1	25995,277982
chrX:134883834-134884040	chrX	+	134883985	134884045	True	NM_001017436,NM_001017435	chrX,chrX	-,+	CT45A4,CT45A3	52740,-548
chrX:134883834-134884040	chrX	+	134866711	134866771	False	NM_152582,NM_001017436	chrX,chrX	+,+	CT45A2,CT45A4	-548,-548
chrX:134883834-134884040	chrX	-	134936177	134936237	False	NM_018666,NM_001017436	chrX,chrX	+,-	SAGE1,CT45A4	39547,548
chrX:134883834-134884040	chrX	-	134953436	134953496	False	NM_001007551,NM_018666,NM_001172288	chrX,chrX,chrX	-,+,-	CT45A5,SAGE1,CT45A5	548,22288,548
chrX:134883834-134884040	chrX	-	134970686	134970746	False	NM_001017438,NM_018666	chrX,chrX	-,+	CT45A6,SAGE1	548,5038
chr11:59380930-59382531	chr11	+	59380933	59382531	True	NM_001004711,NM_002556	chr11,chr11	+,-	OR4D9,OSBP	-98606,1136
chr10:125428274-125428599	chr10	+	125428314	125428472	True	NM_198148,NM_153442	chr10,chr10	-,+	CPXM2,GPR26	223078,-2494
chr3:107241397-107241804	chr3	+	107241474	107241842	True	NM_001142568,NM_020235,NR_028303	chr3,chr3,chr3	+,+,-	BBX,BBX,LOC100302640	30,30,-281989
chr3:42742293-42742635	chr3	+	42742548	42742640	True	NM_152393,NM_020707,NR_027753	chr3,chr3,chr3	+,-,-	KBTBD5,HHATL,HHATL	-15588,1729,423
chr6:10883219-10883458	chr6	+	10883281	10883417	True	NM_004752,NM_001040274	chr6,chr6	-,+	GCM2,SYCP2L	-1183,3646
chr1:155904355-155904845	chr1	+	155904415	155904883	True	NM_014949,NR_003005,NM_181885	chr1,chr1,chr1	-,-,+	KIAA0907,SCARNA4,RXFP4	-227,-8538,6596
chr6:74072818-74073348	chr6	+	74072843	74073181	True	NM_001080507,NM_001025290,NM_001017361	chr6,chr6,chr6	-,-,+	OOEP,DPPA5,C6orf221	6384,-8844,-494
chr16:15948877-15949337	chr16	+	15948884	15949358	True	NM_002474,NM_001040113,NM_004996,NM_001040114,NM_022844	chr16,chr16,chr16,chr16,chr16	-,-,+,-,-	MYH11,MYH11,ABCC1,MYH11,MYH11	1579,1579,94075,1579,1579
chr22:44257160-44257595	chr22	+	44257165	44257497	True	NM_025225,NM_014351	chr22,chr22	+,-	PNPLA3,SULT4A1	62121,931
chr5:156571765-156572606	chr5	+	156571828	156572632	True	NM_004270,NM_001100816,NM_005546	chr5,chr5,chr5	-,-,+	MED7,MED7,ITK	-1907,-2042,35274
chr11:65600818-65601126	chr11	+	65600837	65601124	True	NM_005507,NM_152760	chr11,chr11	-,+	CFL1,SNX32	24730,285
chr9:77715699-77716076	chr9	+	77715703	77716094	True	NM_012383,NR_023352	chr9,chr9	+,-	OSTF1,C9orf95	-12356,-12570
chr22:24249226-24251013	chr22	+	24250248	24251032	True	NM_001080843,NM_002415	chr22,chr22	-,+	GSTT2B,MIF	52386,-13734
chr22:40392069-40393053	chr22	+	40392185	40393068	True	NM_152512,NM_138435	chr22,chr22	-,+	ENTHD1,FAM83F	-102391,-1283
chr9:130469173-130469382	chr9	+	130469213	130469367	True	NM_001002913,NM_144965,NM_001012502	chr9,chr9,chr9	-,+,+	PTRH1,TTC16,C9orf117	8619,8990,-1
chr9:108424219-108425568	chr9	+	108424427	108425224	True	NM_005502,NM_005421	chr9,chr9	-,+	ABCA1,TAL2	-733900,0
chr6:31240102-31240782	chr6_mcf_hap5	+	2621197	2621279	False	NM_002117,NR_026791	chr6_mcf_hap5,chr6_mcf_hap5	-,+	HLA-C,HCG27	-816,-73748
chr6:31240102-31240782	chr6	+	31240675	31240757	True	NM_002117,NR_026791	chr6,chr6	-,+	HLA-C,HCG27	-820,-75192
chr6:31240102-31240782	chr6_cox_hap2	+	2753930	2754012	False	NM_002117,NR_026791	chr6_cox_hap2,chr6_cox_hap2	-,+	HLA-C,HCG27	-820,-73674
chr22:37260102-37260451	chr22	+	37260101	37260359	True	NM_013416,NM_000631,NM_002854	chr22,chr22,chr22	+,+,-	NCF4,NCF4,PVALB	-3122,-3122,-44584
chr1:17763444-17763767	chr1	+	17763457	17763749	True	NM_001136204,NM_018715,NM_207421	chr1,chr1,chr1	-,-,+	RCC2,RCC2,PADI6	1358,2521,-64767
chr12:54476393-54476984	chr12	+	54476505	54476961	True	NR_026657,NR_026658	chr12,chr12	+,-	LOC100240734,LOC100240735	19031,-898
chr4:189057741-189057942	chr4	+	189057836	189057983	True	NM_173553,NM_178556	chr4,chr4	-,+	TRIML2,TRIML1	-31428,2614
chr6:54707081-54707713	chr6	+	54707318	54707491	True	NM_001010872,NM_001042406	chr6,chr6	+,-	FAM83B,HMGCLL1	4077,736584
chrX:10631517-10632292	chrX	+	10631656	10631985	True	NM_001122608,NM_001098624	chrX,chrX	+,-	HCCS,MID1	497420,13845
chrX:10631517-10632292	chrX	-	10630856	10630906	False	NM_001122608,NM_001098624	chrX,chrX	+,-	HCCS,MID1	498499,14923
chr1:186278269-186279636	chr1	+	186278333	186279427	True	NM_003292,NM_005807	chr1,chr1	-,+	TPR,PRG4	65092,-12989
chr10:35417746-35418844	chr10	+	35417961	35418635	True	NM_182850,NM_182853,NM_181571,NM_183060,NM_001881,NM_001198777,NM_183012,NM_183013,NM_183011	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,-,+,+,+	CREM,CREM,CREM,CREM,CREM,CUL2,CREM,CREM,CREM	-2220,-2220,-1633,-1633,-2220,-38391,8074,-2220,8074
chr12:25651864-25652164	chr12	+	25651864	25651996	True	NM_152590,NM_001001660	chr12,chr12	-,+	IFLTD1,LYRM5	54232,-303775
chr14:105451265-105451505	chr14	+	105451369	105451433	True	NM_174891,NM_138420	chr14,chr14	+,-	C14orf79,AHNAK2	1182,-6675
chr10:45457467-45458776	chr10	+	45457639	45458793	True	NR_033842,NM_032023	chr10,chr10	-,+	LOC220980,RASSF4	-2502,-2471
chr20:44420781-44421038	chr20	+	44420884	44421034	True	NM_080614,NM_052951	chr20,chr20	-,+	WFDC3,DNTTIP1	-337,-359
chr4:76600430-76600696	chr4	+	76600429	76600695	True	NM_203505,NM_203504,NM_012297,NM_003715	chr4,chr4,chr4,chr4	-,-,-,+	G3BP2,G3BP2,G3BP2,USO1	-1762,-1762,-2086,49133
chr6:14740219-14741989	chr6	+	14740308	14741951	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	504575,921396
chr12:113342320-113343411	chr12	+	113342373	113343445	True	NM_001032409,NM_002534,NM_001193521,NM_016816	chr12,chr12,chr12,chr12	+,+,-,+	OAS1,OAS1,RASAL1,OAS1	1293,1293,230164,1293
chrX:153193300-153193577	chrX	+	153193363	153193449	True	NM_001164741,NM_003491,NM_001666,NM_001146151	chrX,chrX,chrX,chrX	-,-,-,+	ARHGAP4,NAA10,ARHGAP4,AVPR2	-1649,7069,-1649,-22885
chr3:186285104-186285326	chr3	+	186285206	186285330	True	NM_016306,NM_001134415,NM_018138	chr3,chr3,chr3	+,-,-	DNAJB11,TBCCD1,TBCCD1	3136,3052,-65
chr5:34917667-34919075	chr5	+	34917770	34919084	True	NM_002853,NM_018321,NR_026591	chr5,chr5,chr5	-,+,-	RAD1,BRIX1,RAD1	-1990,-2002,-2039
chrX:149630858-149631271	chrX	+	149630941	149631223	True	NM_005491,NM_001184808	chrX,chrX	+,-	MAMLD1,CD99L2	-17272,436116
chr15:74908887-74909107	chr15	+	74908973	74909095	True	NM_001130028,NM_003992,NM_001142443	chr15,chr15,chr15	+,+,-	CLK3,CLK3,EDC3	-1689,-8311,79341
chr19:47292178-47292951	chr19	+	47292235	47292953	True	NM_001145144,NM_001145145,NM_005628,NM_024301	chr19,chr19,chr19,chr19	-,-,-,+	SLC1A5,SLC1A5,SLC1A5,FKRP	-1690,-4101,-393,-42990
chr9:90999359-91000740	chr9	+	90999418	91000410	True	NM_006717,NM_001166137	chr9,chr9	+,-	SPIN1,FAM75C2	2886,-249518
chr3:49046608-49047693	chr3	+	49046654	49047563	True	NM_001009996,NM_018031	chr3,chr3	-,+	DALRD3,WDR6	8505,-2068
chr22:41033968-41034272	chr22	+	41033979	41034303	True	NM_020831,NM_005297	chr22,chr22	-,+	MKL1,MCHR1	-1289,40878
chr3:128996423-128997053	chr3	+	128996469	128997029	True	NM_006026,NM_001006109,NM_020187	chr3,chr3,chr3	-,+,+	H1FX,C3orf37,C3orf37	38141,787,654
chr5:140305917-140306171	chr5	+	140305968	140306084	True	NM_018898,NM_031882,NM_002109	chr5,chr5,chr5	+,+,-	PCDHAC1,PCDHAC1,HARS	217,217,-234997
chr2:220085455-220085865	chr2	+	220085486	220085677	True	NM_024085,NM_001077198,NM_018089,NM_001042410,NM_005689	chr2,chr2,chr2,chr2,chr2	-,-,+,+,-	ATG9A,ATG9A,ANKZF1,ANKZF1,ABCB6	8735,8735,8801,8932,-1774
chrX:52646444-52647485	chrX	+	52646802	52647166	True	NR_027250,NM_173358	chrX,chrX	+,-	SSX8,SSX7	4818,36834
chrX:52646444-52647485	chrX	+	48109728	48109778	False	NM_175723,NM_005635	chrX,chrX	-,+	SSX5,SSX1	-53529,5018
chr1:11984022-11984240	chr1	+	11984080	11984154	True	NM_000302,NM_138346	chr1,chr1	+,-	PLOD1,KIAA2013	10569,2381
chr19:11641019-11641248	chr19	+	11641081	11641246	True	NM_001142464,NM_001142465,NM_016581,NR_024551,NM_001299	chr19,chr19,chr19,chr19,chr19	-,-,-,-,+	ECSIT,ECSIT,ECSIT,ECSIT,CNN1	-1094,-1094,-1094,-1401,8332
chr15:74658183-74658389	chr15	+	74658183	74658245	True	NM_001099773,NM_182791,NM_000781	chr15,chr15,chr15	-,+,-	CYP11A1,CCDC33,CYP11A1	358,-47334,1886
chr2:11888472-11888754	chr2	+	11888478	11888710	True	NM_012344,NM_145693	chr2,chr2	-,+	NTSR2,LPIN1	-78149,-1789
chr2:87035492-87036126	chr2	+	87035589	87036113	True	NM_001145873,NR_037931	chr2,chr2	-,+	CD8A,LOC100286979	-70,52834
chr1:207227074-207227339	chr1	+	207227082	207227220	True	NM_001018053,NM_018566,NM_006212	chr1,chr1,chr1	+,-,+	PFKFB2,YOD1,PFKFB2	-513,-2660,-513
chr4:8272457-8272760	chr4	+	8272485	8272719	True	NM_053044,NM_001130088	chr4,chr4	+,-	HTRA3,ABLIM2	-1047,-111926
chr6:27858561-27858819	chr6	+	27858565	27858697	True	NM_003514,NM_003527,NM_003535	chr6,chr6,chr6	-,+,-	HIST1H2AM,HIST1H2BO,HIST1H3J	2324,2505,5
chr12:113339864-113340829	chr12	+	113340237	113340590	True	NM_001032409,NM_002534,NM_001193521,NM_016816	chr12,chr12,chr12,chr12	+,+,-,+	OAS1,OAS1,RASAL1,OAS1	4148,4148,233032,4148
chr9:130659799-130660217	chr9	+	130659851	130660235	True	NM_001018078,NM_013443	chr9,chr9	+,-	FPGS,ST6GALNAC6	-94394,1686
chr1:64060554-64061627	chr1	+	64060922	64061580	True	NM_001172819,NM_014288,NM_002633	chr1,chr1,chr1	+,-,+	PGM1,ITGB3BP,PGM1	-1494,-72087,-2027
chr1:202313503-202314465	chr1	+	202313918	202314336	True	NM_014176,NM_001167858,NM_002481,NM_001167857	chr1,chr1,chr1,chr1	-,+,+,+	UBE2T,PPP1R12B,PPP1R12B,PPP1R12B	-2824,3493,3493,3493
chr1:145309651-145311399	chr1	+	145310162	145310234	True	NM_032305,NM_001039703	chr1,chr1	-,+	POLR3GL,NBPF10	160203,-16842
chr1:1860371-1860589	chr1	+	1860544	1860604	True	NM_138705,NM_178545	chr1,chr1	+,-	CALML6,TMEM52	-14329,-9804
chr16:89162185-89162796	chr16	+	89162197	89162709	True	NM_001127214,NR_023316,NM_174917,NM_005187	chr16,chr16,chr16,chr16	+,+,+,-	ACSF3,ACSF3,ACSF3,CBFA2T3	-1994,-1994,-1994,-118693
chr1:39878441-39879528	chr1	+	39878444	39878854	True	NR_003929,NM_015038	chr1,chr1	-,+	PPIEL,KIAA0754	146566,-3319
chr3:38496441-38496738	chr3	+	38496441	38496734	True	NM_001106,NR_028389	chr3,chr3	+,-	ACVR2B,LOC100128640	-702,-130
chr3:123282969-123284488	chr3	+	123283134	123284530	True	NM_198402,NM_012430	chr3,chr3	-,+	PTPLB,SEC22A	19444,-362411
chr17:40936444-40936656	chr17	+	40936459	40936609	True	NM_032387,NM_001040431	chr17,chr17	+,-	WNK4,CCDC56	-3861,14145
chr14:102428971-102429508	chr14	+	102429124	102429545	True	NM_001376,NM_005348	chr14,chr14	+,-	DYNC1H1,HSP90AA1	1319,124018
chr12:54391686-54392127	chr12	+	54391801	54391893	True	NR_029617,NM_006897,NR_003716	chr12,chr12,chr12	+,+,-	MIR196A2,HOXC9,HOTAIR	-6339,1983,-29286
chr17:43338159-43339199	chr17	+	43338328	43339071	True	NR_024435,NM_152343	chr17,chr17	+,-	LOC100133991,C17orf46	486,458
chr17:26129067-26130895	chr17	+	26129157	26130850	True	NM_000625,NR_024043	chr17,chr17	-,+	NOS2,LGALS9	-1602,-171035
chr11:43333197-43333628	chr11	+	43333200	43333618	True	NR_024625,NR_033868,NM_006595,NM_001142930,NM_001142931	chr11,chr11,chr11,chr11,chr11	+,-,+,+,+	API5,LOC399881,API5,API5,API5	-20,-42281,-20,-20,-20
chr7:75831096-75831321	chr7	+	75831168	75831346	True	NM_001110199,NM_016086	chr7,chr7	+,-	SRRM3,STYXL1	-3,-153847
chr3:125654189-125655515	chr3	+	125654230	125655442	True	NM_001015050,NR_024251,NM_001195223	chr3,chr3,chr3	-,+,-	ALG1L,LOC100125556,ALG1L	495,-18846,495
chr16:28995556-28996169	chr16	+	28995605	28996057	True	NM_001014987,NM_024816,NM_001014989,NM_001014988,NM_001142448,NM_001142449,NM_001142451,NM_001142450,NM_032038,NM_014387	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,-,+,+,+,+,+,+,+,+	LAT,RABEP2,LAT,LAT,SPNS1,SPNS1,SPNS1,SPNS1,SPNS1,LAT	329,-59073,89,329,-9560,-9560,-9560,-9560,-9560,329
chr3:87316572-87317387	chr3	+	87316571	87317198	True	NM_014043,NM_001122757,NM_000306	chr3,chr3,chr3	+,-,-	CHMP2B,POU1F1,POU1F1	-40215,8592,8592
chr8:144350384-144352093	chr8	+	144350434	144351992	True	NM_052963,NM_138465	chr8,chr8	-,+	TOP1MT,GLI4	65108,-879
chr12:121732895-121733496	chr12	+	121733015	121733501	True	NM_002560,NM_153500,NM_153499,NM_172214,NM_172215,NM_172216,NM_006549,NM_172226	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,-,-,-,-,-,-,-	P2RX4,CAMKK2,CAMKK2,CAMKK2,CAMKK2,CAMKK2,CAMKK2,CAMKK2	-85416,2660,2660,2660,2660,2660,2660,1105
chr15:79101065-79102064	chr15	+	79101151	79102001	True	NR_036495,NM_014272	chr15,chr15	+,-	LOC646938,ADAMTS7	-56823,1822
chr9:35675149-35675647	chr9	+	35675298	35675492	True	NM_032818,NM_001216	chr9,chr9	-,+	C9orf100,CA9	-10020,-1434
chr5:140870699-140871021	chr5	+	140870842	140870960	True	NM_032406,NM_032407,NM_018929,NM_018928,NM_001079812	chr5,chr5,chr5,chr5,chr5	+,+,+,+,-	PCDHGC4,PCDHGC5,PCDHGC5,PCDHGC4,DIAPH1	-6152,-2085,-2085,-6152,127712
chr16:30132758-30133236	chr16	+	30132777	30133272	True	NM_002746,NM_001109891,NR_027081,NM_001040056,NM_024307	chr16,chr16,chr16,chr16,chr16	-,-,+,-,-	MAPK3,MAPK3,LOC100271831,MAPK3,GDPD3	1408,1408,-7395,1408,-7899
chr1:180598712-180598991	chr1	+	180598712	180598897	True	NM_001135669,NM_032360,NM_004736	chr1,chr1,chr1	+,-,+	XPR1,ACBD6,XPR1	2248,-126690,2248
chr20:61731456-61731842	chr20	+	61731464	61731857	True	NR_003245,NR_003244	chr20,chr20	-,+	HAR1B,HAR1A	1864,786
chr19:35459849-35461345	chr19	+	35459906	35461383	True	NM_001136199,NM_175872	chr19,chr19	+,-	GRAMD1A,ZNF792	29862,-4953
chr7:48014837-48015995	chr7	+	48015029	48016008	True	NM_001100159,NM_004507,NR_037917	chr7,chr7,chr7	+,-,-	C7orf57,HUS1,HUS1	59108,3264,3264
chr20:19263798-19264289	chr20	+	19263843	19264263	True	NR_024564,NM_020689	chr20,chr20	-,+	LOC100130264,SLC24A3	1027,-70611
chr3:160118875-160119460	chr3	+	160118907	160119469	True	NR_029525,NM_001002800,NR_029663,NM_020800,NM_005496,NM_001190241	chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,-,+,-	MIR16-2,SMC4,MIR15B,IFT80,SMC4,IFT80	3063,-1528,2906,-1587,-611,-1587
chr22:35572033-35572595	chr22	+	35572036	35572569	True	NM_001003681,NM_005368	chr22,chr22	+,-	HMGXB4,MB	80875,440866
chr17:46178509-46178727	chr17	+	46178522	46178766	True	NM_001127228,NM_152244,NM_006807,NM_013323	chr17,chr17,chr17,chr17	-,+,-,+	CBX1,SNX11,CBX1,SNX11	167,6153,34,6180
chr3:35678234-35680030	chr3	+	35678344	35680046	True	NM_033403,NM_016300	chr3,chr3	-,+	DCLK3,ARPP21	1101362,3802
chr8:145745390-145745813	chr8	+	145745488	145745858	True	NM_001001795,NM_001024678,NM_014665,NM_004260	chr8,chr8,chr8,chr8	-,-,+,-	C8orf82,LRRC24,LRRC14,RECQL4	8650,6608,-2176,-2278
chr1:32647107-32647981	chr1	+	32647268	32647989	True	NM_175852,NM_019118	chr1,chr1	+,-	TXLNA,TMEM234	-1974,39987
chr15:25463424-25463717	chr15	+	25463441	25463747	True	NR_003315,NR_003358,NR_003495,NR_003496,NR_003497,NR_022010,NR_003344,NR_003345,NR_003351,NR_003314,NM_130838,NR_003342,NR_003343,NR_003303,NR_003346	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,+,-,+,+,+,+	SNORD115-23,SNORD115-43,SNORD115-24,HBII-52-27,HBII-52-28,PAR4,SNORD115-29,SNORD115-30,SNORD115-36,SNORD115-22,UBE3A,SNORD115-25,SNORD115-26,SNORD115-11,SNORD115-31	-6549,4645,-4686,1902,3753,-6653,4645,6602,4645,-8427,186956,-2804,16,4645,8508
chr12:93101469-93103394	chr12	+	93101513	93103431	True	NM_001178097,NM_001037671,NM_003566	chr12,chr12,chr12	+,+,-	C12orf74,C12orf74,EEA1	-4952,-4952,219726
chr11:65327811-65328138	chr11	+	65327814	65328148	True	NM_001130144,NM_021070,NM_001164266,NM_006396	chr11,chr11,chr11,chr11	-,-,-,+	LTBP3,LTBP3,LTBP3,SSSCA1	-2115,-2115,-2115,9794
chr1:40363579-40363979	chr1	+	40363586	40364016	True	NM_001033081,NM_001033082,NM_005376,NM_001136493	chr1,chr1,chr1,chr1	-,-,-,+	MYCL1,MYCL1,MYCL1,MFSD2A	3721,3721,3721,56767
chr17:27224863-27225698	chr17	+	27225006	27225532	True	NM_144683,NM_005702,NM_004475	chr17,chr17,chr17	-,+,-	DHRS13,ERAL1,FLOT2	4607,-43014,-291
chr1:12565328-12565904	chr1	+	12565366	12565696	True	NR_003025,NM_004753,NR_003022	chr1,chr1,chr1	+,-,+	SNORA59A,DHRS3,SNORA59B	1603,112174,1603
chr2:24152917-24154602	chr2	+	24153250	24154528	True	NM_181713,NM_017552	chr2,chr2	+,-	UBXN2A,ATAD2B	8847,-3316
chr11:234708-234918	chr11	+	234727	234889	True	NM_002817,NM_175932,NM_001017524,NM_012239	chr11,chr11,chr11,chr11	+,+,-,-	PSMD13,PSMD13,SIRT3,SIRT3	1918,1918,1523,1523
chr1:26504144-26505096	chr1	+	26504512	26504892	True	NM_015871,NM_032588,NM_006314,NR_023345	chr1,chr1,chr1,chr1	+,-,+,+	ZNF593,TRIM63,CNKSR1,CNKSR1	-8175,-110391,-582,-581
chr16:69459178-69460018	chr16	+	69459178	69460029	True	NM_030579,NM_005652	chr16,chr16	+,-	CYB5B,TERF2	-731,-39304
chr11:76814107-76814822	chr11	+	76814122	76814640	True	NM_182833,NM_006189	chr11,chr11	-,+	GDPD4,OMP	183873,-287
chr17:68119189-68120515	chr17	+	68119454	68120544	True	NM_170742,NR_036534	chr17,chr17	+,-	KCNJ16,FLJ36644	-18511,45049
chr19:59086466-59086727	chr19	+	59086605	59086765	True	NM_003422	chr19	-	MZF1	-1663
chr1:151138122-151138465	chr1	+	151138166	151138500	True	NM_024575,NM_001204848,NR_037937,NM_001204856,NM_001136543,NM_024041,NM_212551	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,-,+,-	TNFAIP8L2,TNFAIP8L2-SCNM1,SCNM1,SCNM1,LYSMD1,SCNM1,LYSMD1	-9112,-9112,-3,-3,-26,-3,-80
chr13:20197003-20198116	chr13	+	20197707	20197986	True	NM_199254,NM_017520	chr13,chr13	-,+	TPTE2,MPHOSPH8	-86804,9801
chr20:61196551-61196888	chr20	+	61196556	61196832	True	NR_033263,NR_029676	chr20,chr20	-,+	C20orf200,MIR133A2	-47788,-34488
chr2:114037471-114038133	chr2	+	114037476	114038130	True	NR_015377,NM_003466,NM_013952,NM_013953,NM_013992	chr2,chr2,chr2,chr2,chr2	+,-,-,-,-	LOC654433,PAX8,PAX8,PAX8,PAX8	-43681,-978,-978,-978,-978
chr14:88459526-88459740	chr14	+	88459606	88459784	True	NM_001037525,NM_001201402,NM_001201401,NM_000153,NM_003608	chr14,chr14,chr14,chr14,chr14	-,-,-,-,+	GALC,GALC,GALC,GALC,GPR65	9,275,9,9,11683
chr13:114456020-114456255	chr13	+	114456054	114456286	True	NM_182614,NR_028064	chr13,chr13	+,-	FAM70B,LOC100130386	5929,-1992
chr2:27481707-27481956	chr2	+	27481727	27481961	True	NM_173650,NM_003459	chr2,chr2	+,-	DNAJC5G,SLC30A3	16327,4049
chr3:196242842-196243892	chr3	+	196243196	196243700	True	NM_001105573,NM_001077657	chr3,chr3	+,-	FBXO45,C3orf43	52024,-959
chr8:12805454-12806323	chr8	+	12805460	12806176	True	NM_020844,NR_015383	chr8,chr8	+,-	KIAA1456,LOC340357	-2328,-136550
chr11:61009191-61010838	chr11	+	61009723	61010602	True	NM_014224,NM_152718	chr11,chr11	+,-	PGA5,VWCE	-1130,52243
chr11:61009191-61010838	chr11	+	60972640	60972698	False	NM_001079807,NM_017966	chr11,chr11	+,-	PGA3,VPS37C	-1715,-43724
chr11:61009191-61010838	chr11	+	60990897	60991776	False	NM_017966,NM_001079808	chr11,chr11	-,+	VPS37C,PGA4	-61981,-1127
chr21:34639911-34640854	chr21	+	34640155	34640831	True	NM_000628,NR_024102	chr21,chr21	+,-	IL10RB,C21orf54	-1534,-97614
chr1:78133608-78135437	chr1	+	78133960	78134939	True	NM_015534,NM_198549	chr1,chr1	-,+	ZZZ3,FAM73A	13467,110369
chr3:114848128-114849901	chr3	+	114848174	114849582	True	NM_001130064,NM_015642	chr3,chr3	+,-	GAP43,ZBTB20	492568,16605
chr2:121101470-121101679	chr2	+	121101473	121101727	True	NM_002193,NR_000034	chr2,chr2	+,-	INHBB,TMEM185B	1991,-120489
chr17:1589540-1589967	chr17	+	1589571	1589631	True	NM_001163673,NM_006445	chr17,chr17	+,-	WDR81,PRPF8	30185,-1395
chr8:70855126-70855332	chr8	+	70855148	70855371	True	NM_001128206,NM_030958	chr8,chr8	+,-	SULF1,SLCO5A1	-450171,-107849
chr16:8715482-8715981	chr16	+	8715548	8715956	True	NM_001146336,NM_024109	chr16,chr16	-,+	TMEM114,METTL22	-93322,-72
chr11:76586453-76586938	chr11	+	76586488	76586717	True	NM_018367,NR_024042	chr11,chr11	+,-	ACER3,GUCY2E	-14635,-153655
chr5:138629798-138630092	chr5	+	138629934	138630091	True	NM_005847,NM_018834,NM_001194956,NM_001194955	chr5,chr5,chr5,chr5	-,+,+,+	SLC23A1,MATR3,MATR3,MATR3	88998,-652,-546,-546
chr17:21118059-21119773	chr17	+	21118171	21119624	True	NM_003876,NM_145109,NR_024547	chr17,chr17,chr17	-,+,-	TMEM11,MAP2K3,TMEM11	-263,68343,-263
chr17:53499468-53500176	chr17	+	53499776	53499999	True	NM_002126,NM_012329	chr17,chr17	+,-	HLF,MMD	-157506,-435
chr12:52773559-52774145	chr12	+	52773584	52774126	True	NM_033045,NM_002284	chr12,chr12	-,+	KRT84,KRT86	5341,-77986
chr1:205809406-205810360	chr1	+	205809456	205810355	True	NM_152491,NM_181644	chr1,chr1	-,+	PM20D1,MFSD4	8972,-271395
chr17:45405114-45406979	chr17	+	45405155	45406745	True	NM_001195192,NM_001256,NM_152347	chr17,chr17,chr17	+,-,+	C17orf57,CDC27,C17orf57	-3880,-138490,-3880
chr1:154910057-154910693	chr1	+	154910100	154910706	True	NM_001826,NM_006556	chr1,chr1	+,-	CKS1B,PMVK	36411,-616
chr6:34217675-34217955	chr6	+	34217730	34217972	True	NM_001008704,NM_145905,NM_178508,NM_001008703	chr6,chr6,chr6,chr6	-,+,-,-	C6orf1,HMGA1,C6orf1,C6orf1	-826,-11220,-826,-826
chr11:18252679-18253102	chr11	+	18252716	18253088	True	NM_006512,NR_026563	chr11,chr11	-,+	SAA4,LOC494141	5346,-21935
chr19:40853293-40853599	chr19	+	40853539	40853600	True	NM_012268,NM_001031696,NM_178830	chr19,chr19,chr19	+,+,-	PLD3,PLD3,C19orf47	731,731,744
chr14:56064494-56065007	chr14	+	56064654	56064882	True	NR_027123,NM_182926	chr14,chr14	-,+	C14orf33,KTN1	-17844,-17785
chr9:34710764-34711630	chr9	+	34710890	34711129	True	NM_004512,NM_002989	chr9,chr9	+,-	IL11RA,CCL21	-57010,-743
chr14:24617745-24618263	chr14	+	24617757	24618157	True	NM_017999,NM_016049,NM_002818	chr14,chr14,chr14	+,-,-	RNF31,FAM158A,PSME2	-1149,-6960,-1902
chr1:182370392-182371838	chr1	+	182370475	182371701	True	NR_034131,NM_001033044,NM_002065,NM_001033056,NM_172000	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	NCRNA00272,GLUL,GLUL,GLUL,TEDDM1	5054,-9134,-9134,-9936,-724
chr9:95039815-95040945	chr9	+	95040097	95040707	True	NR_037424,NM_001012267	chr9,chr9	-,+	MIR3651,CENPP	14172,47033
chr8:143833873-143834127	chr8	+	143833916	143834132	True	NM_016647,NM_205545	chr8,chr8	+,-	C8orf55,LYPD2	-25346,30
chr13:73301426-73301775	chr13	+	73301444	73301814	True	NM_001071775,NM_024808	chr13,chr13	-,+	MZT1,C13orf34	174,227
chr1:29557601-29558014	chr1	+	29557664	29557878	True	NM_016011,NM_133177,NM_133178,NM_001195001,NM_001024732,NM_005704	chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,+,-,+	MECR,PTPRU,PTPRU,PTPRU,MECR,PTPRU	-210,5149,5149,5149,-210,5149
chr17:8537824-8539615	chr17	+	8538032	8539466	True	NM_030808,NM_005964	chr17,chr17	+,-	NDEL1,MYH10	-198906,-3996
chr19:48613858-48614088	chr19	+	48614018	48614126	True	NM_001159323,NM_001159322,NM_022142,NM_003706	chr19,chr19,chr19,chr19	-,-,+,-	PLA2G4C,PLA2G4C,ELSPBP1,PLA2G4C	33,33,-116161,33
chr19:51226614-51227213	chr19	+	51226737	51227251	True	NM_016148,NM_002975	chr19,chr19	-,+	SHANK1,CLEC11A	-6542,-183
chr1:207645516-207646161	chr1	+	207645708	207646206	True	NR_029832,NM_001877	chr1,chr1	-,+	MIR29C,CR2	329128,-18127
chr2:74595243-74595484	chr2	+	74595299	74595533	True	NM_001135041,NM_023019,NR_024463	chr2,chr2,chr2	-,-,+	DCTN1,DCTN1,LOC100189589	6379,6379,17311
chr21:46976338-46976592	chr21	+	46976341	46976550	True	NM_130444,NM_194255	chr21,chr21	+,-	COL18A1,SLC19A1	-100974,-13956
chr17:39891319-39891610	chr17	+	39891323	39891551	True	NM_000805,NM_177977,NM_001079870,NM_001079871	chr17,chr17,chr17,chr17	+,-,-,-	GAST,HAP1,HAP1,HAP1	-22761,-425,-425,-425
chr17:41620909-41622460	chr17	+	41620940	41622378	True	NM_001079675,NM_004941,NM_001986	chr17,chr17,chr17	-,+,-	ETV4,DHX8,ETV4	1434,-59657,977
chr5:138892521-138893948	chr5	+	138892566	138893858	True	NM_198282,NM_003339	chr5,chr5	-,+	TMEM173,UBE2D2	-30223,46892
chr20:30437759-30438689	chr20	+	30437848	30438448	True	NM_004118,NM_001008409	chr20,chr20	-,+	FOXS1,TTLL9	-4428,20056
chr11:34468121-34469900	chr11	+	34468182	34469893	True	NM_001752,NM_198381	chr11,chr11	+,-	CAT,ELF5	-7769,63503
chr20:7969593-7969863	chr20	+	7969682	7969913	True	NM_015192,NM_021156	chr20,chr20	+,-	PLCB1,TMX4	143382,30537
chr8:80681427-80681689	chr8	+	80681434	80681562	True	NM_001040708,NM_007029,NM_012258	chr8,chr8,chr8	-,+,-	HEY1,STMN2,HEY1	-1336,-158436,-1336
chr4:110623075-110623295	chr4	+	110623090	110623243	True	NM_018983,NM_001226,NM_032992	chr4,chr4,chr4	+,-,-	GAR1,CASP6,CASP6	113422,1437,1437
chr10:61879452-61880145	chr10	+	61879595	61880177	True	NM_001149,NM_001170406	chr10,chr10	-,+	ANK3,CDK1	20651,657911
chr2:54201344-54202284	chr2	+	54201396	54202128	True	NM_014614,NM_138448	chr2,chr2	-,+	PSME4,ACYP2	-3419,140281
chr12:18854077-18855383	chr12	+	18854603	18855424	True	NM_033328,NM_033123	chr12,chr12	+,-	CAPZA3,PLCZ1	35620,35550
chr22:25710158-25712092	chr22	+	25710402	25712048	True	NR_029395,NM_182492	chr22,chr22	+,-	IGLL3P,LRP5L	2175,46535
chr3:174673729-174675325	chr3	+	174673929	174675005	True	NM_207015,NM_031955	chr3,chr3	+,-	NAALADL2,SPATA16	-96869,-1814871
chr21:29909565-29910602	chr21	+	29909642	29910424	True	NM_013240,NR_026552,NR_026553	chr21,chr21,chr21	-,+,+	N6AMT1,NCRNA00161,NCRNA00161	347319,1215,1215
chr2:85358276-85359955	chr2	+	85358540	85359887	True	NM_006464,NM_031283	chr2,chr2	-,+	TGOLN2,TCF7L1	195538,695
chr9:6721747-6722806	chr9	+	6722100	6722391	True	NM_000170,NM_001146696	chr9,chr9	-,+	GLDC,KDM4C	-76408,-1289
chr1:234043765-234044378	chr1	+	234043833	234044269	True	NM_173508,NM_005646	chr1,chr1	+,-	SLC35F3,TARBP1	-3211,570642
chr14:24900977-24901191	chr14	+	24901021	24901205	True	NM_001039771,NM_015299	chr14,chr14	-,+	CBLN3,KHNYN	-2290,-1931
chr9:140443122-140443739	chr9	+	140443219	140443613	True	NM_032477,NM_152286,NM_001098537	chr9,chr9,chr9	+,-,-	MRPL41,PNPLA7,PNPLA7	2695,1423,1423
chr18:13612930-13613808	chr18	+	13612995	13613769	True	NM_001003675,NM_001003674,NM_001098801,NM_181483,NM_004338	chr18,chr18,chr18,chr18,chr18	+,+,-,+,+	C18orf1,C18orf1,C18orf19,C18orf1,C18orf1	-1388,-1388,112872,7097,7097
chr3:9689669-9690284	chr3	+	9689707	9690167	True	NM_001077526,NM_198560,NM_022485,NM_001077525	chr3,chr3,chr3,chr3	+,-,+,+	MTMR14,LHFPL4,MTMR14,MTMR14	949,-94221,949,949
chr1:236232218-236232613	chr1	+	236232225	236232451	True	NM_002508,NM_003272	chr1,chr1	-,+	NID1,GPR137B	-3744,73380
chr2:87036818-87037186	chr2	+	87036955	87037213	True	NM_001145873,NR_037931	chr2,chr2	-,+	CD8A,LOC100286979	-1436,51734
chr11:20691787-20692084	chr11	+	20691860	20692122	True	NM_201551,NM_006157,NM_001029865	chr11,chr11,chr11	+,+,-	NELL1,NELL1,DBX1	-794,-794,-509990
chr11:18417145-18417470	chr11	+	18417194	18417518	True	NR_028500,NM_001165416,NM_001165414,NM_001165415,NM_005566,NM_181508,NM_001135239	chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,-,+	LDHA,LDHA,LDHA,LDHA,LDHA,HPS5,LDHA	-1309,-1309,294,-1309,-1309,-73473,-1309
chr12:70635432-70636630	chr12	+	70635608	70636666	True	NR_037615,NM_014515,NM_002837,NM_001199303,NM_001199302	chr12,chr12,chr12,chr12,chr12	+,+,-,+,+	CNOT2,CNOT2,PTPRB,CNOT2,CNOT2	827,107,367008,827,143
chr8:9005255-9006417	chr8	+	9005355	9006259	True	NM_153332,NM_024607,NM_001201329	chr8,chr8,chr8	+,-,-	ERI1,PPP1R3B,PPP1R3B	-145092,2011,2943
chr1:207919632-207921423	chr1	+	207920006	207921454	True	NM_153826,NM_172359,NM_172361,NR_029832,NM_002389,NM_172351,NM_172350,NM_172353,NM_172352	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,-,+,+,+,+,+	CD46,CD46,CD46,MIR29C,CD46,CD46,CD46,CD46,CD46	3928,3928,3928,53880,3928,3928,3928,3928,3928
chrX:111903643-111903899	chrX	+	111903695	111903937	True	NM_001004308,NM_178175	chrX,chrX	+,-	ZCCHC16,LHFPL1	-577493,19488
chr13:79221777-79222970	chr13	+	79221915	79222650	True	NM_024546,NM_001161407	chr13,chr13	-,+	RNF219,NDFIP2	10721,832608
chr5:133861167-133861477	chr5	+	133861374	133861500	True	NM_001033503,NM_015288	chr5,chr5	-,+	SAR1B,PHF15	107083,297
chr12:1056346-1056908	chr12	+	1056681	1056751	True	NM_134424,NM_178039	chr12,chr12	-,+	RAD52,ERC1	2162,43652
chr12:104533833-104534262	chr12	+	104534022	104534258	True	NM_006166,NM_001093771	chr12,chr12	-,+	NFYB,TXNRD1	-1982,75300
chr10:67330709-67332459	chr10	+	67330828	67332204	True	NR_001446,NM_001127384	chr10,chr10	+,-	ANXA2P3,CTNNA3	-745596,2093269
chr11:125495241-125495444	chr11	+	125495261	125495439	True	NM_001114122,NM_001114121,NM_001274,NM_001612	chr11,chr11,chr11,chr11	+,+,+,-	CHEK1,CHEK1,CHEK1,ACRV1	-276,-276,872,55404
chr3:15560241-15560628	chr3	+	15560248	15560678	True	NM_005677,NM_000060,NM_080539	chr3,chr3,chr3	-,+,-	COLQ,BTD,COLQ	2632,82576,2632
chrX:26209231-26210288	chrX	+	26209324	26210146	True	NM_139058,NM_173523	chrX,chrX	-,+	ARX,MAGEB6	-1175259,410
chr18:61549953-61550305	chr18	+	61549953	61550205	True	NM_002575,NM_001143818,NM_006919	chr18,chr18,chr18	+,+,-	SERPINB2,SERPINB2,SERPINB3	4733,4733,-220756
chr16:10784784-10785496	chr16	+	10784827	10785461	True	NM_002484,NM_144674	chr16,chr16	+,-	NUBP1,TEKT5	52236,3391
chr2:120125390-120126035	chr2	+	120125479	120126067	True	NM_001079863,NM_001178017,NM_020548,NM_001079862,NM_001178043,NM_001178042,NM_001178041,NM_001017927	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,+,+,+,-	DBI,DBI,DBI,DBI,DBI,DBI,DBI,C2orf76	-279,-701,-977,-1026,-977,-977,-977,-1221
chr14:96180143-96180357	chr14	+	96180184	96180352	True	NM_001098725,NM_004918,NM_021966	chr14,chr14,chr14	-,+,-	TCL1A,TCL1B,TCL1A	231,-27481,231
chr1:145414751-145415387	chr1	+	145414966	145415336	True	NM_213652,NM_145277,NM_032305,NM_213653,NM_202004	chr1,chr1,chr1,chr1,chr1	+,+,-,+,+	HFE2,HFE2,POLR3GL,HFE2,HFE2	-1826,-1826,55101,-1826,-1826
chr16:11373602-11373872	chr16	+	11373618	11373880	True	NM_021247,NM_152308,NM_002761,NM_002762	chr16,chr16,chr16,chr16	-,+,-,-	PRM3,C16orf75,PRM1,PRM2	-6166,65430,1362,-3281
chr19:17532286-17533219	chr19	+	17532427	17533259	True	NM_004335,NM_138401	chr19,chr19	-,+	BST2,FAM125A	-16043,-1567
chr14:75518042-75518269	chr14	+	75518076	75518319	True	NM_001042430,NM_014381,NM_001040108	chr14,chr14,chr14	+,-,-	FAM164C,MLH3,MLH3	17979,-11,-11
chr1:53478977-53479658	chr1	+	53479312	53479548	True	NM_018281,NM_001007100,NM_001007099,NM_001007250	chr1,chr1,chr1,chr1	-,+,+,+	ECHDC2,SCP2,SCP2,SCP2	-91866,1061,1061,1061
chrX:15754413-15756085	chrX	+	15754650	15755917	True	NR_002725,NM_007220	chrX,chrX	-,+	INE2,CA5B	49846,494
chr2:74782812-74783195	chr2	+	74782886	74783194	True	NM_001197260,NM_001381,NM_032603	chr2,chr2,chr2	+,+,-	DOK1,DOK1,LOXL3	-6790,-1425,-1824
chr5:89704526-89705315	chr5	+	89704634	89705204	True	NM_006467,NM_004365	chr5,chr5	+,-	POLR3G,CETN3	65476,449
chr6:163139048-163140711	chr6	+	163139285	163140691	True	NM_152410,NM_004562,NM_013987,NM_001080379,NM_001080378,NM_013988	chr6,chr6,chr6,chr6,chr6,chr6	+,-,-,+,+,-	PACRG,PARK2,PARK2,PACRG,PACRG,PARK2	7472,8193,8193,8310,7472,8193
chr2:8981996-8982744	chr2	+	8982011	8982707	True	NM_020738,NM_002166	chr2,chr2	-,+	KIDINS220,ID2	-4256,-159949
chr1:169862122-169862491	chr1	+	169862130	169862414	True	NM_020423,NM_018186,NM_181093	chr1,chr1,chr1	-,+,-	SCYL3,C1orf112,SCYL3	712,-97631,712
chr2:176985982-176986199	chr2	+	176986037	176986187	True	NM_002148,NM_019558,NM_014213,NM_001080458,NM_001199747,NM_001199746	chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,-,+,+	HOXD10,HOXD8,HOXD9,EVX2,HOXD8,HOXD8	-4596,8280,1225,-37347,8234,8280
chr12:49582917-49584010	chr12	+	49583028	49584011	True	NM_006009,NM_032704	chr12,chr12	-,+	TUBA1A,TUBA1C	-167,74853
chr14:63688713-63690209	chr14	+	63689718	63690180	True	NM_145171,NM_020663	chr14,chr14	-,+	GPHB5,RHOJ	94435,-18624
chr6:7519209-7520016	chr6	+	7519353	7520005	True	NM_001008844,NM_001170693	chr6,chr6	+,-	DSP,CAGE1	21864,-129411
chr11:118431357-118432709	chr11	+	118431460	118432529	True	NM_020153,NM_001142281,NM_001168618	chr11,chr11,chr11	-,+,-	IFT46,ARCN1,IFT46	4319,10572,4319
chr3:63847760-63848411	chr3	+	63847828	63848450	True	NM_025075,NM_000333	chr3,chr3	-,+	THOC7,ATXN7	1197,1782
chr1:202187873-202188164	chr1	+	202187904	202188206	True	NM_001017404,NR_037664	chr1,chr1	+,-	LGR6,PTPN7	-4672,-57188
chr12:96431761-96432901	chr12	+	96431853	96432891	True	NM_000895,NM_152435	chr12,chr12	-,+	LTA4H,AMDHD1	-2488,-94833
chr12:48744939-48746021	chr12	+	48745028	48745994	True	NM_001172682,NM_001172681,NM_181788,NM_152320	chr12,chr12,chr12,chr12	-,-,+,-	ZNF641,ZNF641,H1FNT,ZNF641	1,-354,-22316,-354
chrX:54384105-54384350	chrX	+	54384110	54384394	True	NM_001002838,NM_020922,NM_058163	chrX,chrX,chrX	-,-,+	WNK3,WNK3,TSR2	94,94,82458
chr7:143012903-143013283	chr7	+	143012902	143012990	True	NM_000083,NM_014690	chr7,chr7	+,-	CLCN1,FAM131B	228,46233
chr19:14594122-14595038	chr19	+	14594352	14594824	True	NM_001146693,NM_000955	chr19,chr19	+,-	LOC100130932,PTGER1	4933,-8178
chr12:49449789-49450861	chr12	+	49449872	49450804	True	NM_003482,NM_005430	chr12,chr12	-,+	MLL2,WNT1	-765,-77689
chr22:46732331-46732785	chr22	+	46732389	46732767	True	NR_024009,NM_018006	chr22,chr22	-,+	CN5H6.4,TRMU	-39832,-1142
chr1:23752432-23753538	chr1	+	23752694	23753580	True	NR_033691,NM_003196	chr1,chr1	+,-	C1orf213,TCEA3	-57034,-1433
chr11:6453215-6454700	chr11	+	6453223	6454747	True	NM_000613,NM_001007593	chr11,chr11	-,+	HPX,SMPD1	7557,-41630
chr1:193073979-193074293	chr1	+	193074007	193074281	True	NM_197962,NM_024529,NM_016066	chr1,chr1,chr1	-,+,-	GLRX2,CDC73,GLRX2	325,16806,1013
chr16:18582912-18583361	chr16	+	18583011	18583352	True	NR_003569,NM_173614,NM_001004060	chr16,chr16,chr16	+,-,-	ABCC6P1,NOMO2,NOMO2	-492,-9577,-9577
chr16:18582912-18583361	chr16	-	14917771	14918112	False	NR_023387,NM_014287	chr16,chr16	-,+	ABCC6P2,NOMO1	497,9530
chr16:18582912-18583361	chr16	-	16316536	16316877	False	NM_001171,NM_001079528,NM_001004067	chr16,chr16,chr16	-,-,+	ABCC6,ABCC6,NOMO3	501,501,9511
chr6:25137850-25138315	chr6	+	25137856	25138304	True	NR_002174,NM_001173977,NR_027626	chr6,chr6,chr6	-,+,-	CMAH,LRRC16A,CMAH	39,141351,367
chr3:48129770-48130128	chr3	+	48129797	48130163	True	NM_004345,NM_001134364,NM_002375,NM_030885	chr3,chr3,chr3,chr3	+,-,-,-	CAMP,MAP4,MAP4,MAP4	134698,656,656,656
chr16:719061-719417	chr16	+	719184	719456	True	NM_001005920,NM_003961,NM_138769	chr16,chr16,chr16	-,+,+	JMJD8,RHBDL1,RHOT2	15033,6618,-1102
chr11:67799765-67800438	chr11	+	67799968	67800438	True	NM_030930,NM_006019,NM_002496	chr11,chr11,chr11	-,+,+	UNC93B1,TCIRG1,NDUFS8	-28375,6023,-1935
chr6:14812873-14813227	chr6	+	14812948	14813232	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	433294,850107
chr2:180106369-180107491	chr2	+	180106665	180107429	True	NM_178123,NM_019091	chr2,chr2	-,+	SESTD1,PLEKHA3	21978,-761517
chr12:6612866-6613667	chr12	+	6613266	6613328	True	NM_016497,NR_004387	chr12,chr12	-,+	MRPL51,SCARNA10	-10795,6059
chr19:3225647-3225978	chr19	+	3225779	3225895	True	NR_033342,NM_198969,NM_021938,NM_001172673	chr19,chr19,chr19,chr19	+,-,+,+	CELF5,AES,CELF5,CELF5	-347,-162815,-1129,-1128
chr22:24950481-24950724	chr22	+	24950500	24950772	True	NM_004175,NM_031444	chr22,chr22	+,-	SNRPD3,C22orf13	845,553
chr4:69343158-69344155	chr4_ctg9_hap1	+	173139	173722	False	NM_014058,NM_001076	chr4_ctg9_hap1,chr4_ctg9_hap1	+,-	TMPRSS11E,UGT2B15	-30101,75292
chr4:69343158-69344155	chr4	+	69343223	69343806	True	NM_014058,NM_001076	chr4,chr4	+,-	TMPRSS11E,UGT2B15	-30107,90487
chr6:33545555-33546345	chr6	+	33545697	33546307	True	NR_028361,NM_001188	chr6,chr6	+,-	GGNBP1,BAK1	5168,1813
chr3:109126779-109128334	chr3	+	109127302	109127796	True	NM_018189,NM_001145553	chr3,chr3	-,+	DPPA4,FLJ25363	-70883,1040
chr19:10945772-10946713	chr19	+	10945888	10946732	True	NM_001136482,NM_006858	chr19,chr19	+,-	C19orf38,TMED1	12373,301
chr1:158554124-158554382	chr1	+	158554124	158554387	True	NM_001004478,NM_001004477	chr1,chr1	+,-	OR10Z1,OR10X1	21841,-4435
chr16:57024624-57025181	chr16	+	57024638	57025187	True	NM_024946,NM_032206	chr16,chr16	-,+	FAM192A,NLRC5	194840,-1279
chr5:168045128-168047109	chr5	+	168046279	168047067	True	NM_024594,NR_031721	chr5,chr5	-,+	PANK3,MIR103-1AS	-39665,-58434
chr5:27022927-27024081	chr5	+	27022973	27023727	True	NR_033961,NM_016279	chr5,chr5	+,-	LOC729862,CDH9	1903249,15018
chr8:74887240-74888277	chr8	+	74887303	74888172	True	NM_001204858,NM_001204859,NM_001204857,NM_017866,NM_001204861,NR_033334,NM_001204863,NM_001204862,NM_005648,NM_001204860,NM_001204864,NM_001040613	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,+,-,+,-,-,-,-,-,+	TCEB1,TCEB1,TCEB1,TMEM70,TCEB1,TMEM70,TCEB1,TCEB1,TCEB1,TCEB1,TCEB1,TMEM70	-2781,-2781,-2781,204,-3160,204,-2781,-3160,-2781,-2781,-2781,204
chr7:63893879-63894107	chr7	+	63893880	63894152	True	NM_178558,NR_029404	chr7,chr7	-,+	ZNF680,LOC649395	129403,-8
chr13:114146230-114146449	chr13	+	114146229	114146348	True	NM_001014283,NM_017905	chr13,chr13	-,+	DCUN1D2,TMCO3	-1206,-976
chr11:117068333-117068925	chr11	+	117068519	117068727	True	NM_003186,NM_001001522,NM_004716	chr11,chr11,chr11	+,+,-	TAGLN,TAGLN,PCSK7	1312,1312,34134
chr5:850401-850700	chr5	+	850461	850531	True	NM_001166260,NM_024786	chr5,chr5	+,-	TRIP13,ZDHHC11	42437,620
chr1:26875504-26876461	chr1	+	26875521	26876173	True	NM_001006665,NR_031740,NM_173574	chr1,chr1,chr1	+,+,-	RPS6KA1,MIR1976,ZNF683	-3229,4859,-176255
chr21:38069897-38070120	chr21	+	38069942	38070162	True	NM_001146077,NM_005069,NM_009586	chr21,chr21,chr21	-,+,+	CLDN14,SIM2,SIM2	-121075,1828,1828
chr7:143740973-143742508	chr7	+	143741031	143742148	True	NM_014719,NM_012365	chr7,chr7	-,+	FAM115A,OR2A5	-141859,5346
chr15:70393183-70393600	chr15	+	70393190	70393486	True	NM_020908,NM_001105192,NM_005078,NR_026764	chr15,chr15,chr15,chr15	-,-,-,+	TLE3,TLE3,TLE3,C15orf50	-2934,-2934,-2934,-265668
chr15:91070237-91071300	chr15	+	91070681	91070904	True	NM_001042574,NR_028287,NM_022769	chr15,chr15,chr15	+,-,+	CRTC3,GABARAPL3,CRTC3	2293,-178002,2293
chr21:30458434-30460004	chr21	+	30458550	30459880	True	NM_020152,NM_006585	chr21,chr21	+,-	C21orf7,CCT8	-5736,-12540
chr20:56195051-56195275	chr20	+	56195180	56195256	True	NM_030776,NM_001160417,NM_001160419,NM_001160418,NM_002591	chr20,chr20,chr20,chr20,chr20	-,-,-,-,+	ZBP1,ZBP1,ZBP1,ZBP1,PCK1	426,426,426,426,-59095
chr12:104457291-104457790	chr12	+	104457332	104457818	True	NM_031302,NM_013320	chr12,chr12	-,+	GLT8D2,HCFC2	-13417,417
chrY:1283471-1283748	chrY	+	1283475	1283721	True	NM_022148,NM_001161531,NM_001012288	chrY,chrY,chrY	-,+,-	CRLF2,CSF2RA,CRLF2	-1945,53971,-1948
chrY:1283471-1283748	chrX	+	1333475	1333721	False	NM_022148,NM_001161531,NM_001012288	chrX,chrX,chrX	-,+,-	CRLF2,CSF2RA,CRLF2	-1945,53971,-1948
chrX:103403896-103405299	chrX	+	103404132	103405270	True	NM_001012755,NM_207318	chrX,chrX	-,+	MCART6,FAM199X	-2424,6030
chr11:111365371-111365895	chr11	+	111365588	111365928	True	NR_029839,NM_017589	chr11,chr11	+,-	MIR34B,BTG4	17734,17186
chr1:2161170-2161550	chr1	+	2161226	2161506	True	NM_001146310,NM_003036	chr1,chr1	-,+	C1orf86,SKI	-22054,-1143
chr7:47987846-47989418	chr7	+	47987948	47989366	True	NM_138295,NM_001100159	chr7,chr7	-,+	PKD1L1,C7orf57	123,85750
chr17:61774463-61775539	chr17	+	61774496	61775514	True	NM_203351,NM_030576	chr17,chr17	+,-	MAP3K3,LIMD2	-74746,2055
chr3:129140811-129141258	chr3	+	129140818	129141265	True	NM_018262,NM_207307	chr3,chr3	+,-	IFT122,C3orf25	17702,6280
chr4:99580103-99580447	chr4	+	99580108	99580441	True	NM_005723,NM_015143	chr4,chr4	-,+	TSPAN5,METAP1	-296,336346
chr17:80274684-80275017	chr17	+	80274860	80274996	True	NM_207459,NM_006137	chr17,chr17	+,-	TEX19,CD7	42126,534
chr8:103933105-103935000	chr8	+	103933114	103934550	True	NM_148174,NM_001695	chr8,chr8	-,+	AZIN1,ATP6V1C1	-56717,98697
chr16:73084164-73085062	chr16	+	73084348	73085079	True	NM_006885,NM_001164766,NR_027756	chr16,chr16,chr16	-,-,+	ZFHX3,ZFHX3,HTA	-2074,7508,41168
chr3:10805493-10805782	chr3	+	10805515	10805787	True	NR_027102,NM_014229	chr3,chr3	-,+	LOC285370,SLC6A11	140,52129
chr17:40994647-40994952	chr17	+	40994714	40994912	True	NM_001158,NM_003734,NM_176863,NM_009590,NM_005789,NM_003766	chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,-	AOC2,AOC3,PSME3,AOC2,PSME3,BECN1	1696,8288,-9342,1696,-9342,-18404
chr7:45063703-45065426	chr7	+	45063745	45065068	True	NR_003697,NM_001029835	chr7,chr7	-,+	C7orf40,CCM2	-37486,2164
chr6:111769683-111770115	chr6	+	111770048	111770108	True	NM_002912,NR_034111	chr6,chr6	-,+	REV3L,LOC643749	34356,34566
chr1:27560355-27560610	chr1	+	27560360	27560570	True	NM_015023,NM_003047	chr1,chr1	+,-	WDTC1,SLC9A1	436,-78909
chr15:78935248-78936211	chr15	+	78935284	78935915	True	NM_000745,NM_000750	chr15,chr15	+,-	CHRNA5,CHRNB4	-77480,-1697
chr17:67093454-67094137	chr17	+	67093581	67094175	True	NM_080283,NM_002758	chr17,chr17	-,+	ABCA9,MAP2K6	-36445,316662
chr22:39545973-39546696	chr22	+	39545977	39546513	True	NM_181773,NM_175709	chr22,chr22	+,-	APOBEC3H,CBX7	-52799,2075
chr7:41741250-41742628	chr7	+	41741301	41742557	True	NM_002192,NR_027119,NR_027118	chr7,chr7,chr7	-,+,+	INHBA,LOC285954,LOC285954	210,-7814,-7846
chr1:33004888-33005149	chr1	+	33004992	33005158	True	NM_178547,NM_001040441	chr1,chr1	-,+	ZBTB8OS,ZBTB8A	111077,-271
chr1:110159963-110160629	chr1	+	110160013	110160569	True	NM_139156,NM_005272,NM_203404,NM_004037	chr1,chr1,chr1,chr1	+,-,+,+	AMPD2,GNAT2,AMPD2,AMPD2	1889,-4308,7479,2706
chr19:7992059-7992282	chr19	+	7992069	7992197	True	NM_206833,NM_003083,NR_030717	chr19,chr19,chr19	-,+,+	CTXN1,SNAPC2,SNAPC2	-1018,-6926,-6253
chrX:41548242-41549690	chrX	+	41548316	41549399	True	NM_005300,NM_001126054,NM_001097579	chrX,chrX,chrX	+,-,+	GPR34,CASK,GPR34	-149,232939,-149
chr13:113760004-113760225	chr13	+	113760061	113760195	True	NM_001127202,NM_019616,NM_000131	chr13,chr13,chr13	-,+,+	PCID2,F7,F7	102884,-7,-7
chr20:56884505-56884712	chr20	+	56884701	56884761	True	NR_003505,NM_020673	chr20,chr20	-,+	PPP4R1L,RAB22A	-206,9
chr4:185128028-185128438	chr4	+	185128047	185128456	True	NM_020225,NM_153343	chr4,chr4	+,-	STOX2,ENPP6	-301589,10711
chr12:58026991-58027772	chr12	+	58027078	58027534	True	NM_001478,NM_133489	chr12,chr12	-,+	B4GALNT1,SLC26A10	-93,-13436
chr13:113775391-113775626	chr13	+	113775421	113775635	True	NM_000504,NM_001127202	chr13,chr13	+,-	F10,PCID2	1477,87444
chrX:152678465-152678907	chrX	+	152678585	152678901	True	NM_001136273,NM_080701	chrX,chrX	+,-	ZFP92,TREX2	4879,33094
chr1:153598611-153598861	chr1	+	153598651	153598861	True	NM_015607,NM_001024211,NM_001024212,NM_001024213,NM_006271,NM_001024210,NM_020672,NM_005979	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,-,+,-,-,-	CHTOP,S100A13,S100A13,S100A13,S100A1,S100A13,S100A14,S100A13	7663,1306,933,713,2011,7757,-9861,1904
chr2:73337613-73338480	chr2	+	73337612	73338406	True	NM_015470,NM_001134462	chr2,chr2	-,+	RAB11FIP5,NOTO	1790,90979
chr1:207196211-207196493	chr1	+	207196325	207196541	True	NM_023938,NM_001083924,NM_006212	chr1,chr1,chr1	-,-,+	C1orf116,C1orf116,PFKFB2	9610,9610,30078
chr5:147162391-147162876	chr5	+	147162506	147162891	True	NM_014790,NM_054023	chr5,chr5	-,+	JAKMIP2,SCGB3A2	-254,95382
chrX:70444550-70445227	chrX	+	70444687	70445193	True	NM_000166,NM_001097642,NM_201599	chrX,chrX,chrX	+,+,-	GJB1,GJB1,ZMYM3	-1682,-9676,28895
chrX:62777091-62778681	chrX	+	62777090	62778436	True	NM_001010888,NR_015353	chrX,chrX	+,-	ZC3H12B,LOC92249	1930178,2499
chr2:112656870-112657185	chr2	+	112656924	112657092	True	NM_022662,NM_006343	chr2,chr2	-,+	ANAPC1,MERTK	-15183,-784
chr6:14884422-14884820	chr6	+	14884481	14884849	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	361677,778490
chr2:48860479-48861341	chr2	+	48860485	48860981	True	NM_000233,NM_006872	chr2,chr2	-,+	LHCGR,GTF2A1L	121955,-15599
chr17:2412903-2414447	chr17	+	2413486	2414488	True	NM_000430,NM_024086	chr17,chr17	+,-	PAFAH1B1,METTL16	82434,765
chr1:15912466-15913029	chr1	+	15912580	15912832	True	NM_032341,NM_024758	chr1,chr1	+,-	DDI2,AGMAT	31120,-975
chr2:242753351-242754008	chr2	+	242753598	242753836	True	NM_001167599,NM_005018,NM_080741,NM_001167601,NM_001167600,NM_001167602	chr2,chr2,chr2,chr2,chr2,chr2	+,-,+,+,+,+	NEU4,PDCD1,NEU4,NEU4,NEU4,NEU4	-1619,47272,-1619,-3489,-3489,-1619
chr9:26980006-26980948	chr9	+	26980091	26980685	True	NM_025103,NM_022901	chr9,chr9	+,-	IFT74,LRRC19	-23771,25063
chr19:54607730-54608137	chr19	+	54607786	54608024	True	NM_133169,NM_130771,NM_206818,NM_004542,NM_133168	chr19,chr19,chr19,chr19,chr19	-,-,-,+,-	OSCAR,OSCAR,OSCAR,NDUFA3,OSCAR	-3638,-3638,-3638,-1677,-3638
chr6:126111288-126111505	chr6	+	126111323	126111469	True	NM_001199620,NM_001199621,NM_016063,NM_181782,NM_001122842,NM_001199619	chr6,chr6,chr6,chr6,chr6,chr6	+,+,-,+,+,+	NCOA7,NCOA7,HDDC2,NCOA7,NCOA7,NCOA7	-9067,439,-488041,439,439,-9067
chr1:35365360-35365648	chr1	+	35365451	35365617	True	NM_001080418,NM_002060	chr1,chr1	-,+	DLGAP3,GJA4	5417,-106903
chr9:131484440-131484862	chr9	+	131484445	131484879	True	NM_013355,NM_032799	chr9,chr9	+,-	PKN3,ZDHHC12	-19694,1579
chr12:6450537-6450843	chr12	+	6450625	6450837	True	NM_001144857,NM_001065	chr12,chr12	+,-	PLEKHG6,TNFRSF1A	-28859,496
chr12:64044256-64045419	chr12	+	64044272	64045467	True	NM_014254,NM_173812	chr12,chr12	+,-	TMEM5,DPY19L2	128169,16937
chr13:113778804-113779958	chr13	+	113778944	113780006	True	NM_000504,NM_001127202	chr13,chr13	+,-	F10,PCID2	-1882,83073
chrY:2369870-2370477	chrY	+	2370166	2370246	True	NM_001171135,NM_001171136,NM_004729,NM_145177,NR_033381	chrY,chrY,chrY,chrY,chrY	-,-,-,-,+	ZBED1,ZBED1,ZBED1,DHRSX,CD99P1	-1586,-1158,-1158,-1151,107059
chrY:2369870-2370477	chrX	+	2420166	2420246	False	NM_001171135,NM_001171136,NM_004729,NM_145177,NR_033381	chrX,chrX,chrX,chrX,chrX	-,-,-,-,+	ZBED1,ZBED1,ZBED1,DHRSX,CD99P1	-1586,-1158,-1158,-1151,107059
chr1:44820564-44820826	chr1	+	44820750	44820820	True	NM_018150,NM_024066	chr1,chr1	+,-	RNF220,ERI3	50139,169
chr6:30230509-30232001	chr6_qbl_hap6	+	1523439	1523853	False	NR_027822,NM_003449	chr6_qbl_hap6,chr6_qbl_hap6	+,-	HLA-L,TRIM26	-3244,-49365
chr6:30230509-30232001	chr6_dbb_hap3	+	1524202	1524616	False	NR_027822,NM_003449	chr6_dbb_hap3,chr6_dbb_hap3	+,-	HLA-L,TRIM26	-3246,-49365
chr6:30230509-30232001	chr6_mann_hap4	+	1578601	1579015	False	NR_027822,NM_003449	chr6_mann_hap4,chr6_mann_hap4	+,-	HLA-L,TRIM26	-3242,-48952
chr6:30230509-30232001	chr6_ssto_hap7	+	1560526	1560940	False	NR_027822,NM_003449	chr6_ssto_hap7,chr6_ssto_hap7	+,-	HLA-L,TRIM26	-3246,-48961
chr6:30230509-30232001	chr6	+	30230525	30230939	True	NR_027822,NM_003449	chr6,chr6	+,-	HLA-L,TRIM26	-3246,-49372
chr7:30215871-30216147	chr7	+	30216034	30216194	True	NM_152793,NR_037513	chr7,chr7	+,-	C7orf41,MIR550B1	-41533,113362
chr9:71393781-71395119	chr9	+	71393887	71394863	True	NM_002732,NM_138333	chr9,chr9	-,+	PRKACG,FAM122A	234226,100
chr1:43426660-43427451	chr1	+	43426697	43427433	True	NR_033967,NM_006516	chr1,chr1	+,-	FLJ32224,SLC2A1	-2028,-1850
chr2:177015192-177015701	chr2	+	177015218	177015750	True	NR_033979,NM_014621,NR_029609	chr2,chr2,chr2	-,+,+	LOC401022,HOXD4,MIR10B	37986,362,-238
chr11:88752796-88753809	chr11	+	88752892	88753850	True	NM_001143831,NM_000372	chr11,chr11	-,+	GRM5,TYR	27440,157189
chrX:7165433-7166625	chrX	+	7165518	7166658	True	NM_000351,NM_001178135	chrX,chrX	+,-	STS,HDHD1	-28098,-99287
chr22:31882442-31883698	chr22	+	31883083	31883468	True	NM_019843,NM_001007467,NM_001164502,NM_001164501,NM_014775	chr22,chr22,chr22,chr22,chr22	-,+,-,-,+	EIF4ENIF1,SFI1,EIF4ENIF1,EIF4ENIF1,SFI1	2457,8792,2457,2130,8792
chr10:43953815-43954106	chr10	+	43953858	43954155	True	NR_026693,NM_001098204	chr10,chr10	+,-	ZNF487P,HNRNPF	-21342,-49162
chr10:72647431-72647694	chr10	+	72647579	72647675	True	NM_000281,NM_003901	chr10,chr10	-,+	PCBD1,SGPL1	916,-71926
chr1:2282248-2282539	chr1	+	2282252	2282468	True	NM_007033,NR_024489	chr1,chr1	+,-	RER1,LOC100129534	40745,1682
chr9:34992274-34992724	chr9	+	34992315	34992613	True	NM_001135004,NM_001135005,NM_012266,NM_007126	chr9,chr9,chr9,chr9	+,+,+,-	DNAJB5,DNAJB5,DNAJB5,VCP	-2641,-2099,-2641,80176
chr16:23192655-23193340	chr16	+	23192670	23192786	True	NM_001039,NM_020718	chr16,chr16	+,-	SCNN1G,USP31	1253,-32079
chrX:19906281-19906760	chrX	+	19906517	19906719	True	NM_031892,NM_001173456	chrX,chrX	-,+	SH3KBP1,PDHA1	-773,-544557
chr3:183965935-183966363	chr3	+	183966046	183966406	True	NM_005787,NM_001006941,NR_030410,NM_032331,NM_014693,NR_024534,NR_024533	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,+,+,+,-,-	ALG3,ALG3,MIR1224,ECE2,ECE2,ALG3,ALG3	403,957,-6904,1038,1038,403,403
chr1:38472479-38472692	chr1	+	38472479	38472615	True	NM_004468,NM_016037	chr1,chr1	-,+	FHL3,UTP11L	-1245,5768
chr2:241837093-241837666	chr2	+	241837533	241837665	True	NM_024861,NM_001085437,NM_000030	chr2,chr2,chr2	-,-,+	C2orf54,C2orf54,AGXT	-6081,-1960,-29422
chr17:3501683-3501968	chr17	+	3501727	3501811	True	NM_080705,NM_080706,NM_018727,NM_001031681	chr17,chr17,chr17,chr17	-,-,-,+	TRPV1,TRPV1,TRPV1,CTNS	-2602,-5556,-1391,37950
chr14:21757588-21758106	chr14	+	21757669	21757989	True	NM_020366,NM_031314	chr14,chr14	+,-	RPGRIP1,HNRNPC	-1585,-20031
chr5:132110070-132111484	chr5	+	132110351	132111503	True	NM_001039780,NM_001098811,NM_001098813,NM_015146,NM_001098812	chr5,chr5,chr5,chr5,chr5	+,-,-,-,-	CCNI2,SEPT8,SEPT8,SEPT8,SEPT8	-27265,1614,2108,1614,1614
chr2:219081201-219081588	chr2	+	219081240	219081610	True	NM_000634,NM_005731,NM_152862	chr2,chr2,chr2	-,+,+	CXCR1,ARPC2,ARPC2	-49524,509,263
chr1:47880077-47881402	chr1	+	47880129	47881401	True	NR_026878,NM_012186	chr1,chr1	-,+	MGC12982,FOXE3	18962,342
chr22:32668150-32668911	chr22	+	32668174	32668948	True	NM_014227,NM_006604	chr22,chr22	-,+	SLC5A4,RFPL3	-16856,81923
chr16:19895785-19896208	chr16	+	19896063	19896197	True	NM_153208,NM_016235	chr16,chr16	+,-	IQCK,GPRC5B	-168336,4
chrX:118892337-118892573	chrX	+	118892343	118892619	True	NM_001105576,NR_002584	chrX,chrX	+,-	ANKRD58,SNORA69	36,28878
chr7:120595341-120597145	chr7	+	120595606	120596897	True	NM_198267,NM_019071,NM_012338	chr7,chr7,chr7	+,+,-	ING3,ING3,TSPAN12	-4847,-4847,-97429
chr13:19957471-19958022	chr13	+	19957471	19957985	True	NR_034026,NR_027248	chr13,chr13	+,-	LOC100287114,ANKRD26P3	-38333,-38358
chr5:75379746-75380272	chr5	+	75379751	75380169	True	NM_001099271,NM_014979	chr5,chr5	-,+	POC5,SV2C	-366438,-497
chr1:173547547-173549184	chr1	+	173547583	173549087	True	NM_001195190,NM_178527	chr1,chr1	+,-	LOC730159,SLC9A11	55573,23196
chr16:29875709-29876029	chr16	+	29875708	29876077	True	NM_006319,NR_024370,NR_015396	chr16,chr16,chr16	-,+,+	CDIPT,LOC440356,LOC440356	-1130,-755,-604
chr9:98272038-98272695	chr9	+	98272061	98272680	True	NM_001010895,NM_000264,NM_001083602,NM_001083603,NM_001083604,NM_001083605,NM_001083606,NM_001083607	chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9	+,-,-,-,-,-,-,-	C9orf102,PTCH1,PTCH1,PTCH1,PTCH1,PTCH1,PTCH1,PTCH1	365219,-1230,6617,6617,-1739,-1739,-2362,-2580
chr17:15599809-15600523	chr17	+	15599851	15600323	True	NM_006470,NM_001130842,NM_020652	chr17,chr17,chr17	-,+,+	TRIM16,ZNF286A,ZNF286A	-13658,2567,2567
chr17:15599809-15600523	chr17	-	18588282	18588754	False	NM_001145045,NM_001037330	chr17,chr17	-,+	ZNF286B,TRIM16L	-2710,36647
chr1:26495926-26496355	chr1	+	26495931	26496367	True	NM_015871,NM_032588,NM_006314,NR_023345	chr1,chr1,chr1,chr1	+,-,+,+	ZNF593,TRIM63,CNKSR1,CNKSR1	20,-101810,7613,7614
chr13:102105161-102105984	chr13	+	102105245	102105965	True	NM_052867,NM_004791	chr13,chr13	-,+	NALCN,ITGBL1	-36432,-330
chr3:116134174-116134981	chr3	+	116134207	116134997	True	NR_015391,NM_002338	chr3,chr3	+,-	NCRNA00295,LSAMP	293637,29438
chr19:42131083-42131283	chr19	+	42131118	42131248	True	NM_033543,NM_001817	chr19,chr19	+,-	CEACAM21,CEACAM4	-48649,2244
chr19:50267318-50268373	chr19	+	50267782	50268050	True	NM_130787,NM_014203,NM_021733	chr19,chr19,chr19	+,+,-	AP2A1,AP2A1,TSKS	2129,2129,-1267
chr21:43137701-43138589	chr21	+	43137719	43138493	True	NR_027272,NR_024028	chr21,chr21	-,+	C21orf129,NCRNA00112	-1784,-1174
chr6:46692172-46693127	chr6	+	46692184	46692940	True	NM_001162435,NM_005084	chr6,chr6	+,-	LOC100287718,PLA2G7	21713,10261
chr17:10267236-10267643	chr17	+	10267238	10267672	True	NM_003802,NM_020233	chr17,chr17	-,+	MYH13,C17orf48	8700,333254
chr16:79751453-79752878	chr16	+	79751553	79752926	True	NM_005360,NM_130897	chr16,chr16	-,+	MAF,DYNLRB2	-116931,821927
chr1:222884450-222885515	chr1	+	222884695	222885495	True	NM_022831,NM_144695	chr1,chr1	-,+	AIDA,BROX	419,410
chr13:51742116-51743751	chr13	+	51742130	51743413	True	NR_003923,NM_145019	chr13,chr13	-,+	GUCY1B2,FAM124A	-101837,53093
chrX:136112367-136112713	chrX	+	136112403	136112761	True	NM_054021,NM_000074	chrX,chrX	-,+	GPR101,CD40LG	1122,-382126
chr12:57980952-57981449	chr12	+	57980956	57981202	True	NM_001146259,NM_001146258,NM_024779,NM_001146260,NM_006400	chr12,chr12,chr12,chr12,chr12	+,+,+,+,-	PIP4K2C,PIP4K2C,PIP4K2C,PIP4K2C,DCTN2	3739,3739,3739,3739,-39978
chr19:51487218-51487434	chr19	+	51487269	51487331	True	NM_005046,NM_005551,NM_139277	chr19,chr19,chr19	-,+,-	KLK7,KLK2,KLK7	-119,-110631,-198
chr1:228354573-228354992	chr1	+	228354677	228355009	True	NM_181465,NM_001010867	chr1,chr1	-,+	MRPL55,IBA57	-57664,-1299
chr4:25375486-25375763	chr4	+	25375485	25375617	True	NM_013367,NM_016955	chr4,chr4	+,-	ANAPC4,SEPSECS	3230,-213281
chr8:124217902-124218104	chr8	+	124217972	124218032	True	NR_024479,NM_207006	chr8,chr8	-,+	LOC100131726,FAM83A	-2989,-23271
chr5:176855302-176857079	chr5	+	176855305	176856855	True	NM_001004106,NM_000505,NM_001004105,NM_002082	chr5,chr5,chr5,chr5	+,-,+,+	GRK6,F12,GRK6,GRK6	-1669,-18728,-1669,-1669
chr21:45429778-45430134	chr21	+	45429929	45430063	True	NR_026961,NM_003274	chr21,chr21	-,+	LOC284837,TRAPPC10	-197481,2142
chr21:33657410-33659226	chr21	+	33657656	33658864	True	NM_178817,NM_206898,NM_018944	chr21,chr21,chr21	+,+,-	MRAP,MRAP,MIS18A	5259,5259,-6280
chr2:105946761-105947331	chr2	+	105946817	105947148	True	NM_001142621,NM_004257,NM_024093	chr2,chr2,chr2	-,-,+	TGFBRAP1,TGFBRAP1,C2orf49	-669,-669,6864
chrX:53711523-53712181	chrX	+	53711528	53712071	True	NM_031407,NM_001031745	chrX,chrX	-,+	HUWE1,RIBC1	1662,-261689
chr18:67853709-67855274	chr18	+	67854261	67855236	True	NM_173630,NM_004232	chr18,chr18	-,+	RTTN,SOCS6	17785,100900
chr2:44589402-44589740	chr2	+	44589646	44589786	True	NM_024766,NM_001171617,NM_006036,NM_001042386,NM_001171603,NM_001042385,NM_001171606,NM_001171613	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-,-,-	CAMKMT,PREPL,PREPL,PREPL,PREPL,PREPL,PREPL,PREPL	-654,-645,-1833,-2758,-645,-2758,-946,-946
chr3:43028434-43028716	chr3	+	43028435	43028556	True	NM_004391,NM_001129908	chr3,chr3	-,+	CYP8B1,FAM198A	-110802,-7732
chr21:34638186-34638400	chr21	+	34638234	34638418	True	NM_000628,NR_024102	chr21,chr21	+,-	IL10RB,C21orf54	253,-95693
chr9:19411527-19411768	chr9	+	19411567	19411805	True	NM_001010,NM_001010887	chr9,chr9	-,+	RPS6,ACER2	-31332,-2700
chr2:85830360-85830595	chr2	+	85830404	85830580	True	NR_033179,NM_016494,NM_001013649,NM_001031738	chr2,chr2,chr2,chr2	-,+,-,-	TMEM150A,RNF181,C2orf68,TMEM150A	-582,-7619,8649,-582
chr2:198571568-198571901	chr2	+	198571573	198571941	True	NM_144629,NM_138395	chr2,chr2	-,+	RFTN2,MARS2	-30989,-1596
chr1:21502032-21502502	chr1	+	21502040	21502257	True	NM_001198801,NM_001198803,NM_001198802,NM_032264	chr1,chr1,chr1,chr1	-,-,-,+	EIF4G3,EIF4G3,EIF4G3,NBPF3	1179,-789,1179,264373
chr10:10997199-10998659	chr10	+	10997297	10998581	True	NM_001025077,NR_024411,NR_024410,NR_015413	chr10,chr10,chr10,chr10	+,-,-,-	CELF2,LOC254312,LOC254312,LOC254312	48677,-3171,-3171,-3171
chr14:60557626-60558031	chr14	+	60557629	60558026	True	NM_022495,NM_016029	chr14,chr14	+,-	C14orf135,DHRS7	602,74235
chr1:45477988-45478591	chr1	+	45478061	45478523	True	NM_000374,NM_024602,NR_036510	chr1,chr1,chr1	+,-,+	UROD,HECTD3,UROD	-307,-1034,-307
chr16:28986875-28987515	chr16	+	28987021	28987276	True	NM_001014987,NM_024816,NM_001014989,NM_001014988,NM_001142448,NM_001142449,NM_001142451,NM_001142450,NM_032038,NM_014387	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,-,+,+,+,+,+,+,+,+	LAT,RABEP2,LAT,LAT,SPNS1,SPNS1,SPNS1,SPNS1,SPNS1,LAT	9110,-50489,8870,9110,-981,-981,-981,-981,-981,9110
chr9:19235699-19237059	chr9	+	19236209	19236947	True	NR_038064,NM_017925	chr9,chr9	-,+	PLIN2,DENND4C	-108605,53801
chr11:1783759-1784063	chr11	+	1783764	1783908	True	NM_001909,NM_001012416,NM_053005	chr11,chr11,chr11	-,+,-	CTSD,KRTAP5-6,MOB2	1364,-65390,1643
chr5:72142184-72144011	chr5	+	72142315	72143872	True	NM_153188,NM_152625	chr5,chr5	+,-	TNPO1,ZNF366	57,-339066
chr20:61731977-61732465	chr20	+	61732053	61732457	True	NR_003245,NR_003244	chr20,chr20	-,+	HAR1B,HAR1A	1264,186
chr11:102494809-102495620	chr11	+	102494820	102495656	True	NM_001166,NM_004771	chr11,chr11	+,-	BIRC2,MMP20	-276905,458
chr11:100997700-100998045	chr11	+	100997714	100997860	True	NM_032021,NM_001202474,NM_000926	chr11,chr11,chr11	+,-,-	TMEM133,PGR,PGR	-134954,1984,2734
chr1:45806135-45808114	chr1	+	45806181	45807719	True	NM_001128425,NM_012222,NM_025077,NM_001048174,NM_001048173,NM_001048172,NM_001048171	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,+,-,-,-,-	MUTYH,MUTYH,TOE1,MUTYH,MUTYH,MUTYH,MUTYH	-39,-39,-890,-552,-394,-394,-39
chrX:134972496-134973739	chrX	+	134972666	134973795	True	NM_001017438,NM_018666	chrX,chrX	-,+	CT45A6,SAGE1	-1422,1989
chrX:100803680-100805370	chrX	+	100803906	100805308	True	NM_001009584,NM_016608	chrX,chrX	-,+	ARMCX6,ARMCX1	67734,205
chr13:114461148-114461426	chr13	+	114461154	114461417	True	NM_182614,NR_028064	chr13,chr13	+,-	FAM70B,LOC100130386	798,-7092
chr19:56000490-56000841	chr19	+	56000543	56000851	True	NM_024710,NM_001144950,NM_020378,NM_001195267	chr19,chr19,chr19,chr19	-,+,+,+	ISOC2,SSC5D,NAT14,SSC5D	-27494,-724,-4037,-724
chr1:84945213-84945864	chr1	+	84945393	84945912	True	NM_025065,NM_005274	chr1,chr1	+,-	RPF1,GNG5	-525,26400
chr13:46645735-46646164	chr13	+	46645755	46646209	True	NM_015070,NM_152719	chr13,chr13	-,+	ZC3H13,SPERT	-18861,-369372
chr6:56907250-56908778	chr6	+	56907585	56908516	True	NM_020931,NM_183227	chr6,chr6	+,-	KIAA1586,RAB23	2867,177799
chr17:44344954-44346619	chr17_ctg5_hap1	+	1212508	1213229	False	NR_026901,NR_037772	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LOC644172,CRHR1	-24121,-42055
chr17:44344954-44346619	chr17_ctg5_hap1	-	519345	520972	False	NM_001193465,NM_014834	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	KIAA1267,LRRC37A	42525,-60741
chr17:44344954-44346619	chr17	+	44345019	44346627	True	NM_001193465,NM_014834	chr17,chr17	-,+	KIAA1267,LRRC37A	-42279,25869
chr19:4830729-4831333	chr19	+	4830857	4831235	True	NM_182919,NM_018708	chr19,chr19	-,+	TICAM1,FEM1A	552,-39180
chr10:81652937-81653565	chr10	+	81653146	81653450	True	NR_033857,NM_003019	chr10,chr10	+,-	LOC100288974,SFTPD	11203,55473
chr18:75688240-75689177	chr18	+	75688346	75689078	True	NM_001480,NM_001025100	chr18,chr18	+,-	GALR1,MBP	-726396,-843572
chr6:42982069-42982395	chr6	+	42982072	42982440	True	NM_057161,NM_033112,NM_014623	chr6,chr6,chr6	+,+,-	KLHDC3,RRP36,MEA1	-146,6944,-454
chr7:98248537-98248940	chr7	+	98248553	98248914	True	NM_002523,NM_018842	chr7,chr7	+,-	NPTX2,BAIAP2L1	-2013,-218126
chr6:137539608-137540271	chr6	+	137539674	137540162	True	NM_000416,NM_001008783	chr6,chr6	-,+	IFNGR1,SLC35D3	455,-296323
chr18:19747613-19749177	chr18	+	19747627	19748884	True	NM_005257,NM_172241	chr18,chr18	+,-	GATA6,CTAGE1	531,249044
chr21:48055547-48055891	chr21	+	48055632	48055782	True	NM_006272,NM_001535	chr21,chr21	-,+	S100B,PRMT2	-30597,-156
chr4:151935636-151936143	chr4	+	151935767	151936120	True	NM_006726,NM_001006,NM_001199282	chr4,chr4,chr4	-,+,-	LRBA,RPS3A,LRBA	580,84633,367
chr1:229824777-229826187	chr1	+	229824831	229826049	True	NM_001025247,NM_014777	chr1,chr1	-,+	TAF5L,URB2	-63037,-62901
chr19:54960928-54961179	chr19	+	54961137	54961221	True	NM_198988,NM_052925	chr19,chr19	-,+	LENG9,LENG8	13725,-1123
chr3:36923307-36924202	chr3	+	36923350	36924259	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	62348,110581
chr3:38546085-38547165	chr3	+	38546209	38547172	True	NM_001145464,NM_005107,NR_028389	chr3,chr3,chr3	+,+,-	EXOG,EXOG,LOC100128640	-8501,-8501,-49898
chr16:71879036-71879618	chr16	+	71879041	71879537	True	NM_001128,NM_001137675,NR_024612	chr16,chr16,chr16	-,+,+	AP1G1,ATXN1L,ATXN1L	-36065,361,361
chr12:53499211-53500013	chr12	+	53499304	53499953	True	NM_002178,NM_003578,NM_032840	chr12,chr12,chr12	+,+,-	IGFBP6,SOAT2,SPRYD3	-7920,-2082,-26100
chrX:9427962-9428545	chrX	+	9428112	9428284	True	NM_001139466,NM_001139467,NM_005647,NM_001139468,NM_000273	chrX,chrX,chrX,chrX,chrX	+,+,+,+,-	TBL1X,TBL1X,TBL1X,TBL1X,GPR143	3050,3050,4916,3050,305779
chr17:79354881-79355082	chr17	+	79354881	79355031	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	18508,-50407
chr5:60620493-60620730	chr5	+	60620549	60620607	True	NM_001048249,NM_020928	chr5,chr5	-,+	C5orf43,ZSWIM6	-162247,7492
chr2:122044356-122044985	chr2	+	122044458	122044936	True	NR_023343,NM_014553	chr2,chr2	+,-	RNU4ATAC,TFCP2L1	243519,-1680
chr3:57680030-57681803	chr3	+	57680285	57681666	True	NM_007159,NM_152678	chr3,chr3	+,-	SLMAP,FAM116A	61507,-1469
chr11:69634590-69634918	chr11	+	69634604	69634936	True	NM_005247,NM_053056	chr11,chr11	-,+	FGF3,CCND1	-412,-178782
chr11:61979165-61979478	chr11	+	61979186	61979310	True	NM_206998,NM_002407	chr11,chr11	-,+	SCGB1D4,SCGB2A1	87276,-3104
chr7:150067022-150067302	chr7	+	150067066	150067176	True	NM_002889,NM_173680,NM_013400,NM_014374,NM_001099695,NM_001099696	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,+,+	RARRES2,ZNF775,REPIN1,REPIN1,REPIN1,REPIN1	-28303,9229,-1238,1081,-1238,-1238
chr10:38146328-38146749	chr10	+	38146355	38146629	True	NM_021045,NM_006954	chr10,chr10	-,+	ZNF248,ZNF33A	11,152948
chr7:74490055-74490327	chr7	+	74490226	74490346	True	NM_030798,NM_001003795	chr7,chr7	-,+	WBSCR16,GTF2IRD2B	-527,18000
chr7:74490055-74490327	chr7	-	74285706	74285800	False	NM_173537,NR_027775	chr7,chr7	-,+	GTF2IRD2,PMS2P5	-17865,21093
chr2:159222389-159223109	chr2	+	159222527	159223109	True	NM_001005476,NM_138803	chr2,chr2	+,-	PKP4,CCDC148	90366,90206
chr14:94858064-94858715	chr14	+	94858154	94858660	True	NM_001127704,NM_001127705,NM_001127706,NM_001127707,NM_001127700,NM_001127701,NM_001127702,NM_001127703,NM_006215,NM_001002236,NM_001002235,NM_000295	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	-,-,-,-,-,-,-,-,+,-,-,-	SERPINA1,SERPINA1,SERPINA1,SERPINA1,SERPINA1,SERPINA1,SERPINA1,SERPINA1,SERPINA4,SERPINA1,SERPINA1,SERPINA1	-1125,-1125,-1125,-1125,-1125,-1125,-1125,-1125,169122,-1125,-1125,-3001
chr14:75082759-75083136	chr14	+	75082797	75083122	True	NM_015962,NM_000428	chr14,chr14	+,-	FCF1,LTBP2	96727,-3763
chr19:35739661-35739938	chr19	+	35739728	35739828	True	NM_205835,NM_015925,NM_152481,NM_205834	chr19,chr19,chr19,chr19	+,+,-,+	LSR,LSR,FAM187B,LSR	-221,-221,-20100,-221
chr12:97856166-97856760	chr12	+	97856233	97856789	True	NR_024037,NR_036189	chr12,chr12	+,-	RMST,MIR4303	2009,532487
chr1:2005549-2005767	chr1	+	2005591	2005675	True	NM_001080484,NM_001033581	chr1,chr1	-,+	KIAA1751,PRKCZ	-70315,-556
chr21:17528477-17529004	chr21	+	17528497	17528813	True	NM_003489,NR_027791	chr21,chr21	-,+	NRIP1,C21orf34	-1091371,37885
chr11:67889505-67889765	chr11	+	67889538	67889598	True	NM_001277,NM_212469,NM_006053	chr11,chr11,chr11	-,-,+	CHKA,CHKA,TCIRG1	-680,-680,-79142
chr1:17378548-17379891	chr1	+	17378630	17379860	True	NM_014675,NM_003000	chr1,chr1	+,-	CROCC,SDHB	-130244,855
chrX:40120250-40121554	chrX	+	40120367	40121551	True	NM_001123384,NM_005765	chrX,chrX	-,+	BCOR,ATP6AP2	-83785,318664
chr10:104475110-104475508	chr10	+	104475110	104475371	True	NM_178858,NM_004311	chr10,chr10	+,-	SFXN2,ARL3	-863,-920
chr7:12615900-12617195	chr7	+	12615920	12616873	True	NM_001112706,NM_001135924	chr7,chr7	+,-	SCIN,VWDE	-5778,-172068
chr5:170769706-170770696	chr5	+	170769777	170770348	True	NM_021025,NR_037474	chr5,chr5	+,-	TLX3,MIR3912	-33540,43469
chr17:62096373-62097490	chr17	+	62096832	62097481	True	NM_001099788,NM_001099789,NM_001099786,NM_001099787,NM_001191031	chr17,chr17,chr17,chr17,chr17	-,-,-,-,+	ICAM2,ICAM2,ICAM2,ICAM2,C17orf72	563,563,563,563,-21172
chr7:55642829-55643389	chr7	+	55642988	55643426	True	NM_018697,NM_030796	chr7,chr7	+,-	LANCL2,VOPP1	-209903,-2788
chr5:137369543-137370993	chr5	+	137369763	137371042	True	NM_016603,NM_001101801,NM_001101800,NR_037900	chr5,chr5,chr5,chr5	-,-,-,+	FAM13B,FAM13B,FAM13B,LOC100130172	-961,-961,-961,-1351
chr1:10002717-10003036	chr1	+	10002719	10003071	True	NM_032368,NM_022787	chr1,chr1	-,+	LZIC,NMNAT1	49,414
chr5:121665083-121665907	chr5	+	121665082	121665795	True	NM_005460,NM_002317	chr5,chr5	+,-	SNCAIP,LOX	-17316,-251027
chr2:174633022-174634913	chr2	+	174633122	174634938	True	NM_145810,NM_001017371	chr2,chr2	+,-	CDCA7,SP3	-413612,194059
chr14:74030221-74030924	chr14	+	74030312	74030760	True	NM_006821,NM_203309	chr14,chr14	+,-	ACOT2,HEATR4	5011,-4661
chr20:62490670-62491154	chr20	+	62490696	62491087	True	NM_080622,NM_025224,NM_199359,NM_003288,NM_199363,NM_199362,NM_199361,NM_199360	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,-,+,+,+,+,+,+	ABHD16B,ZBTB46,TPD52L2,TPD52L2,TPD52L2,TPD52L2,TPD52L2,TPD52L2	1478,-53840,5502,5502,5502,5502,5502,5502
chr7:117822743-117823703	chr7	+	117823079	117823719	True	NM_033427,NM_016200	chr7,chr7	-,+	CTTNBP2,NAA38	-309518,366
chr6:31144984-31145448	chr6_qbl_hap6	+	2441272	2441332	False	NM_007109,NM_002701,NR_026816	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	+,-,-	TCF19,POU5F1,PSORS1C3	-19169,-6952,264
chr6:31144984-31145448	chr6	+	31145402	31145462	True	NM_007109,NM_002701,NR_026816	chr6,chr6,chr6	+,-,-	TCF19,POU5F1,PSORS1C3	-19150,-6951,264
chr6:31144984-31145448	chr6_ssto_hap7	+	2480356	2480416	False	NM_007109,NM_002701,NR_026816	chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7	+,-,-	TCF19,POU5F1,PSORS1C3	-19168,-6952,264
chr12:58007088-58008303	chr12	+	58007316	58008340	True	NM_001111270,NM_182947,NM_001478,NM_178502,NM_133489	chr12,chr12,chr12,chr12,chr12	+,+,-,+,+	ARHGEF25,ARHGEF25,B4GALNT1,DTX3,SLC26A10	-3404,-2149,18695,-8763,5352
chr16:18573449-18573803	chr16	+	18573531	18573815	True	NM_001004060,NM_173614,NR_003569	chr16,chr16,chr16	-,-,+	NOMO2,NOMO2,ABCC6P1	-97,-97,8754
chr16:18573449-18573803	chr16	-	14927255	14927539	False	NR_023387,NM_014287	chr16,chr16	-,+	ABCC6P2,NOMO1	-8696,103
chr16:18573449-18573803	chr16	-	16326069	16326353	False	NM_001171,NM_001079528,NM_001004067	chr16,chr16,chr16	-,-,+	ABCC6,ABCC6,NOMO3	-8741,-8741,35
chr2:74756363-74756618	chr2	+	74756364	74756610	True	NM_133637,NM_181575,NM_145074,NM_013247	chr2,chr2,chr2,chr2	-,-,+,+	DQX1,AUP1,HTRA2,HTRA2	-2956,414,3,3
chr17:61906882-61907275	chr17	+	61906933	61907239	True	NM_002805,NM_001199163,NM_017647	chr17,chr17,chr17	+,+,-	PSMC5,PSMC5,FTSJ3	-2214,-1940,-1902
chrX:114429769-114430268	chrX	+	114429901	114430303	True	NM_001145346,NM_020871	chrX,chrX	+,-	RBMXL3,LRCH2	-6003,38382
chr17:74639847-74640689	chr17	+	74639897	74640270	True	NM_018414,NR_004395	chr17,chr17	-,+	ST6GALNAC1,SNORD1A	-3,-82233
chr15:65424881-65425357	chr15	+	65424900	65425160	True	NM_005707,NM_001101362	chr15,chr15	-,+	PDCD7,KBTBD13	1064,-55797
chr2:27339114-27340424	chr2	+	27340081	27340403	True	NM_032604,NM_001166239,NM_006569,NM_001166240,NM_001166241	chr2,chr2,chr2,chr2,chr2	+,-,-,-,-	ABHD1,CGREF1,CGREF1,CGREF1,CGREF1	6253,1430,1652,1652,-6111
chr13:28541738-28542084	chr13	+	28541773	28542103	True	NM_001265,NR_002162	chr13,chr13	-,+	CDX2,ATP5EP2	1264,-22481
chr1:52195818-52197221	chr1	+	52196036	52196837	True	NR_031580,NM_148905,NM_148904,NM_148907	chr1,chr1,chr1,chr1	-,+,+,+	MIR761,OSBPL9,OSBPL9,OSBPL9	105287,-608,-608,-608
chr22:35797830-35798410	chr22	+	35797856	35798291	True	NM_005368,NM_006739	chr22,chr22	-,+	MB,MCM5	215144,-1791
chr6:112038078-112038755	chr6	+	112038379	112038669	True	NR_034109,NM_153047	chr6,chr6	+,-	LOC643749,FYN	-233762,2646
chr11:130316048-130317291	chr11	+	130316117	130317199	True	NM_007037,NM_139055	chr11,chr11	-,+	ADAMTS8,ADAMTS15	-17578,1669
chr16:699874-700202	chr16	+	699945	700185	True	NM_138418,NM_032366,NM_145294	chr16,chr16,chr16	+,-,+	FAM195A,C16orf13,WDR90	-8147,-13598,-633
chr7:63966670-63967970	chr7	+	63967115	63967894	True	NM_178558,NR_029404	chr7,chr7	-,+	ZNF680,LOC649395	55673,-73105
chr17:42441568-42442020	chr17	+	42441737	42441864	True	NM_198475,NM_002087	chr17,chr17	-,+	FAM171A2,GRN	-502,-19297
chr6:35704222-35704820	chr6	+	35704225	35704821	True	NR_027117,NM_001145775,NM_145028	chr6,chr6,chr6	-,-,+	LOC285847,FKBP5,C6orf81	-27,-7865,37
chr19:7985454-7985704	chr19	+	7985614	7985698	True	NM_206833,NM_001195259,NM_003083,NR_030717	chr19,chr19,chr19,chr19	-,+,+,+	CTXN1,LOC645781,SNAPC2,SNAPC2	5403,-4633,-471,168
chr3:127308605-127308847	chr3	+	127308636	127308710	True	NM_016372,NM_004526,NM_001136053,NM_001142646	chr3,chr3,chr3,chr3	-,+,-,-	TPRA1,MCM2,TPRA1,TPRA1	-9356,8542,836,908
chr11:27722618-27722887	chr11	+	27722622	27722885	True	NM_170734,NR_033315,NM_170733,NM_001709,NM_001143812,NM_001143813,NM_001143810,NM_001143811,NM_001143809,NM_001143808,NM_001143814	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,+,-,-,-,-,-,-,-,-,-	BDNF,BDNF-AS1,BDNF,BDNF,BDNF,BDNF,BDNF,BDNF,BDNF,BDNF,BDNF	-1408,-194275,345,-587,-175,-587,-22,-22,-22,-22,-587
chr20:3712875-3713211	chr20	+	3712917	3713260	True	NM_052970,NM_001197327,NM_023068	chr20,chr20,chr20	+,+,-	HSPA12B,HSPA12B,SIGLEC1	56,56,-25142
chr14:73487353-73487649	chr14	+	73487353	73487527	True	NM_021239,NM_021260	chr14,chr14	+,-	RBM25,ZFYVE1	37693,6443
chr1:2483857-2484156	chr1	+	2483893	2483957	True	NR_037844,NR_026927,NM_003820	chr1,chr1,chr1	-,-,+	LOC100133445,LOC115110,TNFRSF14	4543,377,3847
chr10:6360062-6360461	chr10	+	6360067	6360423	True	NM_004566,NM_000417	chr10,chr10	+,-	PFKFB3,IL2RA	-115278,-255734
chr20:58179451-58179838	chr20	+	58179516	58179844	True	NM_080672,NM_014258	chr20,chr20	+,-	PHACTR3,SYCP2	-4,327415
chr16:31160499-31161003	chr16	+	31160606	31161050	True	NM_173502,NM_001170634	chr16,chr16	-,+	PRSS36,FUS	415,30380
chr2:233570572-233571342	chr2	+	233570703	233571100	True	NM_015575,NM_001172416,NM_001103146,NM_001103147,NM_001103148	chr2,chr2,chr2,chr2,chr2	+,-,+,+,+	GIGYF2,KCNJ13,GIGYF2,GIGYF2,GIGYF2	-8749,70226,-8749,-8749,-8749
chr15:43935657-43936746	chr15	+	43935656	43936640	True	NM_054020,NM_172097,NM_172095,NM_001015001	chr15,chr15,chr15,chr15	-,-,-,+	CATSPER2,CATSPER2,CATSPER2,CKMT1A	4461,4461,4461,48443
chr15:34578715-34579348	chr15	+	34579002	34579151	True	NM_175741,NM_005135	chr15,chr15	+,-	C15orf55,SLC12A6	58914,31931
chr1:33808425-33809818	chr1	+	33808435	33809439	True	NM_004427,NM_152493	chr1,chr1	-,+	PHC2,ZNF362	6110,-86320
chr1:61543176-61543508	chr1	+	61543266	61543522	True	NM_001145511,NM_005595,NM_001145512,NM_032027,NM_001134673	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	NFIA,NFIA,NFIA,TM2D1,NFIA	-375,4457,4011,647631,4457
chr3:49824725-49826176	chr3	+	49824862	49825964	True	NM_153273,NM_001006115,NM_203370	chr3,chr3,chr3	-,-,+	IP6K1,IP6K1,C3orf54	-889,-889,14722
chr22:25053129-25053400	chr22	+	25053257	25053375	True	NR_024593,NR_024494	chr22,chr22	-,+	POM121L10P,BCRP3	1789,-24426
chr19:7811456-7812566	chr19	+	7812169	7812585	True	NM_021155,NM_001144893,NM_001144897,NM_001144896,NM_001144895,NM_001144894,NR_026692,NM_001144899,NM_001144904	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,-,+	CD209,CD209,CD209,CD209,CD209,CD209,CD209,CD209,CLEC4M	25,25,25,25,25,25,25,25,15449
chr1:222794541-222795241	chr1	+	222794588	222795113	True	NM_198551,NM_005681	chr1,chr1	+,-	MIA3,TAF1A	-3201,-31313
chrY:1460103-1460445	chrY	+	1460162	1460426	True	NM_001636,NR_026710,NR_026711	chrY,chrY,chrY	-,+,+	SLC25A6,ASMTL-AS1,ASMTL-AS1	663,8997,8997
chrY:1460103-1460445	chrX	+	1510162	1510426	False	NM_001636,NR_026710,NR_026711	chrX,chrX,chrX	-,+,+	SLC25A6,ASMTL-AS1,ASMTL-AS1	663,8997,8997
chr17:28903539-28903793	chr17	+	28903568	28903676	True	NM_206832,NR_015341	chr17,chr17	-,+	TMIGD1,LRRC37BP1	-242503,-136
chr19:36201510-36202662	chr19	+	36201774	36202485	True	NM_014727,NM_024660,NM_014383	chr19,chr19,chr19	+,-,+	MLL4,IGFLR1,ZBTB32	6435,30916,1344
chr17:617504-617764	chr17	+	617557	617693	True	NM_018289,NM_024792,NM_001128159	chr17,chr17,chr17	-,+,-	VPS53,FAM57A,VPS53	453,18153,453
chr1:63834262-63835019	chr1	+	63834548	63834992	True	NM_014288,NM_013339	chr1,chr1	-,+	ITGB3BP,ALG6	153904,-1348
chr6:2762418-2763005	chr6	+	2762513	2763029	True	NM_001012418,NM_020135,NM_130395	chr6,chr6,chr6	-,+,+	MYLK4,WRNIP1,WRNIP1	-11359,2636,2636
chr2:233354569-233355056	chr2	+	233354688	233355024	True	NM_001195129,NM_004826	chr2,chr2	+,-	PRSS56,ECEL1	30148,-2156
chr10:6442158-6443281	chr10	+	6442356	6443319	True	NR_036502,NM_006257	chr10,chr10	+,-	LOC439949,PRKCQ	179067,178969
chr5:78281825-78283741	chr5	+	78281948	78283491	True	NM_000046,NM_001178005,NM_198709	chr5,chr5,chr5	-,+,-	ARSB,BHMT2,ARSB	-240,82055,-182
chr17:47044370-47044880	chr17	+	47044374	47044626	True	NM_001160423,NM_004123	chr17,chr17	+,-	IGF2BP1,GIP	30147,1379
chr12:70083110-70084381	chr12	+	70083187	70084411	True	NM_032735,NM_022456,NM_152439	chr12,chr12,chr12	-,+,-	BEST3,RAB3IP,BEST3	8835,48219,-131
chr6:134629246-134629785	chr6	+	134629332	134629697	True	NM_004865,NM_001143676	chr6,chr6	+,-	TBPL1,SGK1	-355094,9553
chr2:178972539-178973069	chr2	+	178972734	178973044	True	NM_001077197,NM_152945	chr2,chr2	-,+	PDE11A,RBM45	72,4137
chr1:160178216-160179066	chr1	+	160178366	160179018	True	NM_003768,NR_028106	chr1,chr1	+,-	PEA15,DCAF8	-3293,53309
chr2:102609324-102610380	chr2	+	102609449	102610307	True	NM_173343,NM_004633,NM_001145664	chr2,chr2,chr2	+,+,-	IL1R2,IL1R2,RFX8	5151,-1194,-518284
chr7:22865100-22866387	chr7	+	22865255	22866284	True	NR_003075,NM_019059	chr7,chr7	+,-	SNORD93,TOMM7	29947,-2834
chr22:30753143-30753649	chr22	+	30753156	30753408	True	NM_001005409,NM_005877,NM_001017437	chr22,chr22,chr22	-,-,+	SF3A1,SF3A1,CCDC157	-243,-243,-580
chr22:23745244-23745633	chr22	+	23745286	23745424	True	NR_033408,NR_003950	chr22,chr22	+,-	FBXW4P1,ZDHHC8P1	-140388,-487
chr10:38382518-38383357	chr10	+	38382769	38383269	True	NM_003421,NM_001007094,NM_145011,NM_001178101	chr10,chr10,chr10,chr10	+,+,-,+	ZNF37A,ZNF37A,ZNF25,ZNF37A	-6,-6,-117316,-6
chr8:12220373-12221092	chr8	+	12220466	12221133	True	NR_024044,NR_026789	chr8,chr8	-,+	DEFB109P1,FAM66A	36791,-990
chr8:12220373-12221092	chr8	+	7813779	7814134	False	NR_003668,NR_027424	chr8,chr8	-,+	DEFB109P1B,FAM66E	40959,-1295
chr7:12440329-12441396	chr7	+	12440558	12441408	True	NM_001112706,NM_001135924	chr7,chr7	+,-	SCIN,VWDE	168794,2496
chr19:17857680-17858076	chr19	+	17857995	17858077	True	NM_001161359,NM_001161358,NM_001080421,NM_015122,NM_001161357	chr19,chr19,chr19,chr19,chr19	+,+,-,+,+	FCHO1,FCHO1,UNC13A,FCHO1,FCHO1	4208,449,-58987,4208,449
chr18:32644243-32645608	chr18	+	32644630	32645457	True	NM_001112734,NR_026570	chr18,chr18	-,+	ZSCAN30,MAPRE2	224790,-23369
chr22:42540828-42541250	chr22	+	42540923	42541216	True	NR_002570,NR_034118	chr22,chr22	-,+	CYP2D7P1,LOC100132273	-348,-54037
chr22:42540828-42541250	chr22	+	42527251	42527503	False	NM_001025161,NM_000106,NR_034118	chr22,chr22,chr22	-,-,+	CYP2D6,CYP2D6,LOC100132273	-368,-368,-40365
chr17:78008156-78008948	chr17	+	78008293	78008923	True	NM_017950,NM_019020	chr17,chr17	+,-	CCDC40,TBC1D16	1511,774
chr1:62657825-62659700	chr1	+	62657956	62659361	True	NM_181712,NM_001164835,NM_019079	chr1,chr1,chr1	-,+,+	KANK4,L1TD1,L1TD1	125772,1112,1112
chr1:32169153-32169436	chr1	+	32169261	32169343	True	NM_001856,NM_001525	chr1,chr1	-,+	COL16A1,HCRTR1	475,-86011
chr2:115224073-115224516	chr2	+	115224209	115224345	True	NR_034130,NM_001178036	chr2,chr2	-,+	LOC100499194,DPP10	-486648,-5080
chr11:114278369-114280181	chr11	+	114278370	114280092	True	NM_016090,NM_019021	chr11,chr11	+,-	RBM7,C11orf71	-7037,-7231
chr16:15740829-15741603	chr16	+	15740929	15741586	True	NM_001143979,NM_001184998,NM_014647,NR_030159,NM_001184999,NM_017668	chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,+,-,+	NDE1,KIAA0430,KIAA0430,MIR484,KIAA0430,NDE1	-3865,-3906,-3906,-3838,-3906,2496
chr16:2934001-2934264	chr16	+	2934008	2934292	True	NM_001142499,NM_138439,NM_022119,NM_001142500	chr16,chr16,chr16,chr16	+,+,-,+	FLYWCH2,FLYWCH2,PRSS22,FLYWCH2	-863,-863,-25837,-863
chr22:41986388-41987147	chr22	+	41986621	41986757	True	NM_014460,NM_002676	chr22,chr22	+,-	CSDC2,PMM1	-29662,-750
chr6:170893895-170895322	chr6	+	170894055	170894764	True	NM_001172085,NM_001199461,NM_001199462,NM_001199463,NM_001199464,NM_002598	chr6,chr6,chr6,chr6,chr6,chr6	+,-,-,-,-,-	TBP,PDCD2,PDCD2,PDCD2,PDCD2,PDCD2	-30685,-275,-313,-313,-313,-275
chrX:105420177-105421291	chrX	+	105420388	105421211	True	NM_001171020,NM_152423,NM_000354	chrX,chrX,chrX	+,+,-	MUM1L1,MUM1L1,SERPINA7	-8141,-8141,-137670
chr19:47001011-47001809	chr19	+	47001169	47001391	True	NM_005184,NM_020709	chr19,chr19	+,-	CALM3,PNMAL2	103120,-2000
chr19:58140982-58141992	chr19	+	58141200	58142041	True	NM_198855,NM_017879,NM_006385	chr19,chr19,chr19	+,-,+	ZNF211,ZNF416,ZNF211	2493,-50957,2493
chr17:34592216-34593106	chr17	+	34592980	34593079	True	NM_001001435,NM_001001418	chr17,chr17	+,-	CCL4L1,TBC1D3C	46954,-953
chr17:34592216-34593106	chr17	-	36282919	36283018	False	NM_032258,NR_024178,NM_001123391	chr17,chr17,chr17	+,-,+	TBC1D3F,LOC284100,TBC1D3	941,-38556,941
chr17:34592216-34593106	chr17	+	34504936	34505035	False	NM_001001417,NM_001001435	chr17,chr17	-,+	TBC1D3B,CCL4L1	-948,33432
chr17:34592216-34593106	chr17	+	34809044	34809143	False	NM_001001418,NM_004773,NM_001040282	chr17,chr17,chr17	-,+,-	TBC1D3C,ZNHIT3,TBC1D3G	-953,33329,-941
chr17:34592216-34593106	chr17	+	34757991	34758076	False	NM_001123392,NM_004773	chr17,chr17	-,+	TBC1D3H,ZNHIT3	-941,84396
chr18:46066831-46067067	chr18	+	46066835	46066959	True	NM_001190823,NM_001142397,NM_014772	chr18,chr18,chr18	-,+,+	SMAD7,CTIF,CTIF	402268,-1459,-1459
chr19:678138-678886	chr19	+	678233	678934	True	NM_005860,NM_194460	chr19,chr19	+,-	FSTL3,RNF126	-1895,-15000
chr3:140949569-140950000	chr3	+	140949584	140949937	True	NM_001178140,NM_001037172,NM_152282	chr3,chr3,chr3	-,+,+	TFDP2,ACPL2,ACPL2	769345,744,744
chr12:65582174-65583156	chr12	+	65582231	65583205	True	NM_007191,NM_014319	chr12,chr12	-,+	WIF1,LEMD3	-66885,-18936
chr2:121105533-121105856	chr2	+	121105557	121105873	True	NM_002193,NR_027181	chr2,chr2	+,-	INHBB,LOC84931	-1893,118102
chr19:41198743-41198976	chr19	+	41198852	41198922	True	NM_025194,NM_004756	chr19,chr19	+,-	ITPKC,NUMBL	24085,-2296
chr2:223287878-223288329	chr2	+	223287889	223288272	True	NM_013942,NM_152386	chr2,chr2	-,+	PAX3,SGPP2	-124174,1049
chr7:99515264-99515606	chr7	+	99515383	99515644	True	NM_033091,NM_033017,NR_036679	chr7,chr7,chr7	-,-,+	TRIM4,TRIM4,AZGP1P1	1636,1636,62740
chr5:148959917-148960741	chr5	+	148960052	148960742	True	NM_001892,NM_001001669	chr5,chr5	-,+	CSNK1A1,ARHGEF37	-29045,392
chr7:26193803-26194126	chr7	+	26193831	26194139	True	NM_002137,NM_004289	chr7,chr7	-,+	HNRNPA2B1,NFE2L3	46324,-2035
chr7:115890282-115891307	chr7	+	115890385	115891322	True	NM_152829,NM_012252	chr7,chr7	+,-	TES,TFEC	-27432,-219587
chr10:49899002-49899258	chr10	+	49899043	49899307	True	NM_020945,NM_021226	chr10,chr10	+,-	WDFY4,ARHGAP22	-5576,-85905
chr14:64108698-64109107	chr14	+	64108883	64109080	True	NM_080666,NM_001008726,NM_015180	chr14,chr14,chr14	-,-,+	WDR89,WDR89,SYNE2	-292,-758,210602
chr13:84453484-84453775	chr13	+	84453614	84453732	True	NM_015567,NM_052910	chr13,chr13	+,-	SLITRK5,SLITRK1	3871137,2846
chr5:31795038-31796483	chr5	+	31795116	31796415	True	NR_036241,NM_178140	chr5,chr5	-,+	MIR4279,PDZD2	139900,2615
chr3:64199964-64200545	chr3	+	64199975	64200593	True	NM_198859,NM_001128149	chr3,chr3	-,+	PRICKLE2,ATXN7	10588,-246606
chr17:74497587-74497915	chr17	+	74497689	74497941	True	NR_033357,NM_024599	chr17,chr17	+,-	PRCD,RHBDF2	25726,-180
chr17:74234019-74235313	chr17	+	74234207	74235350	True	NM_052916,NM_182565	chr17,chr17	-,+	RNF157,FAM100B	1090,25935
chr16:31883955-31884196	chr16	+	31883956	31884058	True	NR_002827,NM_003414	chr16,chr16	-,+	HERC2P4,ZNF267	279866,1020
chrX:13942713-13944381	chrX	+	13942713	13944284	True	NM_001001994,NM_003611	chrX,chrX	-,+	GPM6B,OFD1	12598,-189932
chr12:14827863-14828690	chr12	+	14828191	14828738	True	NM_177925,NM_004963	chr12,chr12	+,-	H2AFJ,GUCY2C	98531,20831
chr7:66386913-66387595	chr7	+	66386951	66387635	True	NM_017994,NM_016038	chr7,chr7	+,-	C7orf42,SBDS	-800,73003
chr22:50947949-50948643	chr22	+	50947984	50948283	True	NM_014551,NM_033200,NM_001185011,NM_152299	chr22,chr22,chr22,chr22	+,-,+,+	NCAPH2,LMF2,NCAPH2,NCAPH2	-1390,-1849,-1390,-1390
chr10:43892758-43893764	chr10	+	43892852	43893369	True	NM_001098208,NM_173160,NM_001098206,NM_001098207	chr10,chr10,chr10,chr10	-,+,-,-	HNRNPF,FXYD4,HNRNPF,HNRNPF	-573,-25811,9993,-58
chr5:169812300-169812984	chr5	+	169812332	169812814	True	NM_004137,NM_001034838	chr5,chr5	-,+	KCNMB1,KCNIP1	3888,-31502
chrX:77369318-77371042	chrX	+	77369324	77370705	True	NM_000291,NM_015975	chrX,chrX	+,-	PGK1,TAF9B	-9709,24525
chr15:90933158-90934392	chr15	+	90933263	90934091	True	NR_028287,NM_003870	chr15,chr15	-,+	GABARAPL3,IQGAP1	-40584,-1841
chr12:121088840-121089090	chr12	+	121088919	121089078	True	NM_031205,NM_198202,NM_004276	chr12,chr12,chr12	+,-,+	CABP1,POP5,CABP1	-606,-69718,-606
chr17:27039714-27040046	chr17	+	27039730	27039890	True	NR_024575,NR_024579,NM_000984,NM_152465,NM_001144943,NR_000013,NR_000010,NM_001142625,NM_001144942,NM_001142624,NM_031934	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,-,-,+,+,-,-,-,-	RAB34,RAB34,RPL23A,PROCA1,RAB34,SNORD42B,SNORD4A,RAB34,RAB34,RAB34,RAB34	5411,5411,7109,-858,5446,7677,9709,5446,5068,5446,5068
chr9:101898227-101899238	chr9	+	101898583	101899295	True	NM_004612,NM_033087	chr9,chr9	+,-	TGFBR1,ALG2	-31223,85009
chr21:44860996-44861267	chr21	+	44861000	44861173	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	8730,-13998
chr2:74609650-74609919	chr2	+	74609753	74609904	True	NM_001135040,NM_001135041,NM_001190836,NM_023019,NM_001190837,NR_024463,NR_033935,NM_004082	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	-,-,-,-,-,+,-,-	DCTN1,DCTN1,DCTN1,DCTN1,DCTN1,LOC100189589,DCTN1,DCTN1	-2271,-7891,9367,-7891,-2271,2940,9367,-2271
chr7:142982012-142982393	chr7	+	142982039	142982431	True	NM_032983,NM_032982,NM_153345,NM_014690	chr7,chr7,chr7,chr7	+,+,+,-	CASP2,CASP2,TMEM139,FAM131B	2876,2876,-27,76792
chr12:25345690-25346554	chr12	+	25346161	25346596	True	NM_001001660,NM_001204101,NM_001204102,NM_001082972,NM_001082973,NM_018272	chr12,chr12,chr12,chr12,chr12,chr12	+,-,-,-,-,-	LYRM5,CASC1,CASC1,CASC1,CASC1,CASC1	1553,1549,1549,1549,1549,1549
chr6:31797576-31798491	chr6_qbl_hap6	+	3091316	3091880	False	NM_001040437,NR_002745,NM_005527,NR_002742,NM_005346,NM_001040438	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,SNORD52,HSPA1B,C6orf48	4471,4818,-14834,6628,-2205,4471
chr6:31797576-31798491	chr6_dbb_hap3	+	3083252	3083812	False	NM_001040437,NR_002745,NM_005527,NR_002742,NM_005346,NM_001040438	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,SNORD52,HSPA1B,C6orf48	4467,4814,-14830,6626,-2205,4467
chr6:31797576-31798491	chr6	+	31797665	31798225	True	NM_001040437,NR_002745,NM_005527,NR_002742,NM_005346,NM_001040438	chr6,chr6,chr6,chr6,chr6,chr6	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,SNORD52,HSPA1B,C6orf48	4467,4814,-14830,6627,-2205,4467
chr6:31797576-31798491	chr6_apd_hap1	+	3112429	3112983	False	NM_001040437,NR_002745,NM_005527,NR_002742,NM_005346,NM_001040438	chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,SNORD52,HSPA1B,C6orf48	4463,4810,-14833,6624,-2205,4463
chr6:31797576-31798491	chr6_cox_hap2	+	3307247	3307809	False	NM_001040437,NR_002745,NM_005527,NR_002742,NM_005346,NM_001040438	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,SNORD52,HSPA1B,C6orf48	4459,4806,-14832,6617,-2205,4459
chr1:173719607-173721096	chr1	+	173720118	173721014	True	NM_014458,NM_001171182	chr1,chr1	+,-	KLHL20,CENPL	-36105,72306
chr12:111180562-111180765	chr12	+	111180679	111180749	True	NM_152591,NM_002710	chr12,chr12	+,-	CCDC63,PPP1CC	104061,58
chr1:109318255-109319883	chr1	+	109318425	109319917	True	NM_152763,NM_007269	chr1,chr1	-,+	AKNAD1,STXBP3	79849,-29206
chr5:39210488-39211704	chr5	+	39210537	39211335	True	NM_199335,NM_001465,NM_003999	chr5,chr5,chr5	-,-,+	FYB,FYB,OSMR	8394,8394,-364488
chr11:112096430-112097027	chr11	+	112096772	112097036	True	NM_000317,NM_001145024	chr11,chr11	+,-	PTS,C11orf34	51,34597
chr5:140621231-140621509	chr5	+	140621263	140621503	True	NM_018935,NR_001282,NR_001281,NM_031947	chr5,chr5,chr5,chr5	+,+,+,-	PCDHB15,PCDHB19P,PCDHB18,SLC25A2	3643,-1625,-7376,62159
chr14:77926375-77926999	chr14	+	77926403	77926906	True	NM_012111,NM_022067,NM_001193314,NM_001193315,NM_001193316,NM_001193317	chr14,chr14,chr14,chr14,chr14,chr14	+,-,-,-,-,-	AHSA1,VIPAR,VIPAR,VIPAR,VIPAR,VIPAR	-2093,-2420,-2420,-2420,-2420,-2420
chr7:36397729-36399607	chr7	+	36397993	36399614	True	NM_015314,NM_018685,NM_001199708,NM_001199707,NM_001199706	chr7,chr7,chr7,chr7,chr7	-,+,-,-,-	KIAA0895,ANLN,KIAA0895,KIAA0895,KIAA0895	7286,29817,7314,7218,7278
chr21:45208975-45209331	chr21	+	45208985	45209310	True	NM_000100,NM_003683	chr21,chr21	-,+	CSTB,RRP1	-12726,107
chr12:113496065-113497376	chr12	+	113496385	113497333	True	NM_004416,NM_001193521	chr12,chr12	+,-	DTX1,RASAL1	-775,76276
chr11:912452-912698	chr11	+	912468	912532	True	NM_012305,NM_001142675,NM_001142674,NM_001142677,NM_001142676,NM_023947	chr11,chr11,chr11,chr11,chr11,chr11	+,-,-,-,-,-	AP2A2,CHID1,CHID1,CHID1,CHID1,CHID1	13308,2576,-1594,-1594,-1594,-1594
chr1:183150135-183151065	chr1	+	183150156	183150546	True	NM_018891,NM_170706,NM_005562	chr1,chr1,chr1	+,-,+	LAMC2,NMNAT2,LAMC2	4627,123523,4627
chr17:6722443-6723165	chr17	+	6722467	6722915	True	NR_002710,NM_053285	chr17,chr17	+,-	ALOX12P2,TEKT1	33979,12197
chr5:68858363-68859026	chr5	+	68858406	68858962	True	NR_027439,NM_001042490,NM_001098728	chr5,chr5,chr5	-,+,+	LOC100272216,GTF2H2D,GTF2H2C	70116,-2383,-2406
chr5:68858363-68859026	chr5	-	70360586	70361142	False	NM_022877,NM_001515	chr5,chr5	+,-	SMN2,GTF2H2	-139869,2405
chr5:68858363-68859026	chr5	+	69713555	69714111	False	NR_033417,NR_033968	chr5,chr5	+,-	GTF2H2B,LOC100049076	-2409,137089
chr15:86337227-86337535	chr15	+	86337293	86337485	True	NM_022480,NM_144767	chr15,chr15	-,+	KLHL25,AKAP13	754,-117076
chr14:106936880-106938015	chr14	+	106936933	106938044	True	NR_002224	chr14	-	ADAM6	-498575
chr4:77172988-77173300	chr4	+	77173092	77173156	True	NM_005506,NM_001136570	chr4,chr4	-,+	SCARB2,FAM47E	-38040,-290
chr7:73669992-73670568	chr7	+	73670033	73670624	True	NM_181471,NM_003388,NM_002914	chr7,chr7,chr7	-,+,-	RFC2,CLIP2,RFC2	-1295,33180,-1295
chr19:54801220-54801695	chr19	+	54801275	54801693	True	NM_001172654,NM_001013,NM_006865	chr19,chr19,chr19	-,+,-	LILRA3,RPS9,LILRA3	2578,-96600,2622
chr5:115311481-115311818	chr5	+	115311482	115311790	True	NR_033363,NM_173800	chr5,chr5	-,+	ATG12,AQPEP	-133934,-13388
chr13:19811230-19813212	chr13	+	19811283	19813195	True	NM_006001,NR_034026	chr13,chr13	-,+	TUBA3C,LOC100287114	-55291,105993
chr1:10530018-10530572	chr1	+	10530318	10530455	True	NM_213566,NM_004565,NM_004401	chr1,chr1,chr1	-,+,-	DFFA,PEX14,DFFA	2217,4547,2217
chr4:176681185-176682530	chr4	+	176681411	176682579	True	NM_170710,NM_201591	chr4,chr4	+,-	WDR17,GPM6A	304405,51653
chr7:77324905-77325287	chr7	+	77325067	77325297	True	NM_032936,NM_198467	chr7,chr7	-,+	TMEM60,RSBN1L	102504,445
chr8:4850964-4851172	chr8	+	4850968	4851214	True	NM_033225,NM_001172574	chr8,chr8	-,+	CSMD1,MCPH1	1164,1412898
chr12:7017549-7018784	chr12	+	7018035	7018767	True	NM_032641,NM_201650,NM_006992,NM_001135217,NM_001975	chr12,chr12,chr12,chr12,chr12	-,+,+,+,+	SPSB2,LRRC23,LRRC23,LRRC23,ENO2	-35514,-4189,-4189,-4189,4846
chr11:61719450-61721086	chr11	+	61719518	61720757	True	NM_001139443,NM_004183,NM_002032	chr11,chr11,chr11	+,+,-	BEST1,BEST1,FTH1	-2213,-2213,14429
chr1:17532876-17533272	chr1	+	17532894	17533168	True	NM_007365,NM_013358	chr1,chr1	-,+	PADI2,PADI1	-86946,-1324
chr1:21111262-21111574	chr1	+	21111306	21111387	True	NM_016287,NM_032409	chr1,chr1	-,+	HP1BP3,PINK1	1853,-151418
chr1:149860096-149860659	chr1	+	149860153	149860693	True	NM_175065,NM_003528,NM_003517	chr1,chr1,chr1	-,-,+	HIST2H2AB,HIST2H2BE,HIST2H2AC	-687,-1921,-1679
chr12:8279367-8281286	chr12	+	8279373	8280921	True	NM_016184,NM_194450,NR_036440,NM_194447,NM_194448	chr12,chr12,chr12,chr12,chr12	+,+,-,+,+	CLEC4A,CLEC4A,POU5F1P3,CLEC4A,CLEC4A	-3196,-3196,6581,-3196,-3196
chr3:48410371-48411158	chr3	+	48410376	48411134	True	NM_001159929,NM_207102,NM_001080525,NM_001159927	chr3,chr3,chr3,chr3	+,+,-,+	FBXW12,FBXW12,SPINK8,FBXW12	2574,2574,-40545,2574
chr1:145075183-145075516	chr1	+	145075202	145075382	True	NM_004892,NM_022359	chr1,chr1	+,-	SEC22B,PDE4DIP	21024,854
chr7:150745780-150746001	chr7	+	150745788	150746050	True	NM_004769,NM_001164410,NM_020321,NM_020322,NM_001199692,NM_004935	chr7,chr7,chr7,chr7,chr7,chr7	+,-,+,+,+,-	ACCN3,CDK5,ACCN3,ACCN3,SLC4A2,CDK5	-234,9052,-234,-234,9248,9052
chr6:3457752-3458283	chr6	+	3457799	3458247	True	NM_015482,NM_001128592	chr6,chr6	-,+	SLC22A23,PSMG4	-1006,-198688
chr6:15044307-15046106	chr6	+	15044479	15045891	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	200635,617455
chr7:55986609-55987289	chr7	+	55986767	55987187	True	NM_182633,NM_207366	chr7,chr7	+,-	ZNF713,SEPT14	-6487,-56285
chr3:150671598-150673063	chr3	+	150672041	150673113	True	NR_024066,NM_052995	chr3,chr3	+,-	CLRN1OS,CLRN1	17351,-10018
chr4:7435499-7435734	chr4	+	7435578	7435748	True	NR_036238,NM_001085382	chr4,chr4	+,-	MIR4274,PSAPL1	26006,1002
chr11:60550328-60551435	chr11	+	60550347	60551457	True	NM_206893,NM_004778	chr11,chr11	+,-	MS4A10,GPR44	1363,72039
chr6:146136127-146136369	chr6	+	146136128	146136366	True	NM_032145,NM_000838	chr6,chr6	-,+	FBXO30,GRM1	-207,212415
chr2:11671069-11671903	chr2	+	11671084	11671546	True	NR_003095,NM_148903,NM_014668	chr2,chr2,chr2	-,+,+	E2F6,GREB1,GREB1	-64787,8533,2695
chrX:90690097-90690732	chrX	+	90690141	90690745	True	NM_080832,NM_004538	chrX,chrX	+,-	PABPC5,NAP1L3	-595,2237987
chr22:23482272-23483908	chr22	+	23482315	23483901	True	NM_004914,NM_014433	chr22,chr22	+,-	RAB36,RTDR1	3611,390
chr9:140658659-140659713	chr9	+	140658662	140659735	True	NM_032937,NR_024341	chr9,chr9	-,+	C9orf37,FLJ40292	-145354,-1239
chr11:113259329-113259648	chr11	+	113259390	113259618	True	NM_178510,NR_036183	chr11,chr11	+,-	ANKK1,MIR4301	-928,61242
chr6:36370843-36372392	chr6	+	36370963	36372077	True	NM_016135,NM_173562	chr6,chr6	-,+	ETV7,KCTD20	-15496,38466
chr3:145913024-145913425	chr3	+	145913027	145913456	True	NM_182943,NM_003412	chr3,chr3	-,+	PLOD2,ZIC1	-33745,1213724
chr3:57542171-57542399	chr3	+	57542204	57542370	True	NM_178504,NM_177966	chr3,chr3	-,+	DNAH12,PDE12	-12133,-274
chr4:29135891-29136380	chr4	+	29135897	29136381	True	NR_036237,NM_000730	chr4,chr4	+,-	MIR4275,CCKAR	-314744,-2643855
chr13:95251435-95251831	chr13	+	95251461	95251701	True	NM_014305,NM_180989	chr13,chr13	-,+	TGDS,GPR180	-2950,2402
chr12:44230304-44231240	chr12	+	44230345	44231005	True	NM_002822,NM_032256	chr12,chr12	-,+	TWF1,TMEM117	-30167,-434
chr5:138537492-138538627	chr5	+	138537544	138538634	True	NM_001194954,NM_001037633,NM_022464	chr5,chr5,chr5	+,-,-	MATR3,SIL1,SIL1	70806,-3479,-3479
chr2:44399785-44400312	chr2	+	44400060	44400182	True	NM_001033557,NM_001033556,NM_177969,NM_177968,NM_002706,NM_133259	chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,+,-	PPM1B,PPM1B,PPM1B,PPM1B,PPM1B,LRPPRC	-4125,-4125,-4125,-4125,-4125,-176916
chr14:21538743-21538959	chr14	+	21538837	21539005	True	NM_016423,NM_018071	chr14,chr14	-,+	ZNF219,ARHGEF40	27853,-361
chr1:196739324-196740473	chr1	+	196739826	196740310	True	NM_001166624,NM_021023,NM_198503	chr1,chr1,chr1	+,+,-	CFHR3,CFHR3,KCNT2	3619,3619,-162327
chr3:179371567-179371856	chr3	+	179371571	179371683	True	NM_177988,NM_003940	chr3,chr3	-,+	MRPL47,USP13	-49137,-689
chr3:138326706-138327412	chr3	+	138327026	138327334	True	NM_001033030,NM_001033031,NM_001033032,NM_024491,NM_018147	chr3,chr3,chr3,chr3,chr3	+,+,+,-,+	FAIM,FAIM,FAIM,CEP70,FAIM	207,207,207,-13897,584
chr5:140182189-140182468	chr5	+	140182352	140182512	True	NM_002109,NM_031495,NM_031500,NM_031497,NM_018907,NM_018906,NM_018905	chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,+,+,+,+,+,+	HARS,PCDHA2,PCDHA4,PCDHA3,PCDHA4,PCDHA3,PCDHA2	-111381,-7959,4159,-1620,4159,-1620,-7959
chr16:82659267-82659492	chr16	+	82659325	82659512	True	NM_005792,NM_001257	chr16,chr16	-,+	MPHOSPH6,CDH13	-455496,1065
chr4:183063457-183063853	chr4	+	183063483	183063737	True	NR_031640,NR_027107	chr4,chr4	+,-	MIR1305,MGC45800	26708,1981
chr6:54203376-54203722	chr6	+	54203595	54203767	True	NM_014464,NM_001003760	chr6,chr6	+,-	TINAG,KLHL31	-30451,-673089
chr10:30027632-30028317	chr10	+	30027637	30028337	True	NM_003174,NR_003930	chr10,chr10	-,+	SVIL,LOC387647	-2907,-329187
chr5:149569870-149570187	chr5	+	149569875	149570093	True	NM_002609,NM_014228	chr5,chr5	-,+	PDGFRB,SLC6A7	-34453,-406
chr5:61704454-61705741	chr5	+	61704558	61705598	True	NM_014473,NM_016338,NM_001134779	chr5,chr5,chr5	-,+,+	DIMT1L,IPO11,IPO11	-4830,2974,9112
chr14:32030689-32031283	chr14	+	32030910	32031315	True	NR_036675,NM_025152	chr14,chr14	-,+	GPR33,NUBPL	-73759,-370
chr6:96967809-96969550	chr6	+	96967940	96969485	True	NM_001143957,NM_015323	chr6,chr6	-,+	GPR63,KIAA0776	315918,216
chr1:16371279-16371885	chr1	+	16371293	16371901	True	NM_014424,NM_001165945,NM_000085	chr1,chr1,chr1	-,+,+	HSPB7,CLCNKB,CLCNKB	-26008,3382,-1097
chr5:68965183-68965655	chr5	+	68965306	68965388	True	NR_027439,NM_001042490	chr5,chr5	-,+	LOC100272216,GTF2H2D	-36278,-109292
chr5:68965183-68965655	chr5	+	34208768	34208836	False	NM_016568,NR_037951	chr5,chr5	+,-	RXFP3,C1QTNF3-AMACR	-272339,-84135
chr5:68965183-68965655	chr5	+	70545372	70545454	False	NR_003922,NR_033968	chr5,chr5	+,-	PMCHL2,LOC100049076	126157,9724
chr5:68965183-68965655	chr5	+	69545047	69545129	False	NR_033417,NR_024054	chr5,chr5	+,-	GTF2H2B,LOC100170939	166067,-23425
chr5:68965183-68965655	chr5	+	69841412	69841494	False	NR_033417,NR_033968	chr5,chr5	+,-	GTF2H2B,LOC100049076	-130275,9712
chr20:12359286-12360794	chr20	+	12359453	12360830	True	NM_017714,NM_014962	chr20,chr20	-,+	TASP1,BTBD3	1258803,-460952
chr19:34397822-34398060	chr19	+	34397885	34398063	True	NM_001166057,NM_024076	chr19,chr19	-,+	PEPD,KCTD15	-385086,-110185
chr9:36401253-36401615	chr9	+	36401371	36401651	True	NM_022781,NM_194328,NM_194329,NM_014791,NM_194332,NM_194330	chr9,chr9,chr9,chr9,chr9,chr9	-,-,-,+,-,-	RNF38,RNF38,RNF38,MELK,RNF38,RNF38	-1075,-451,-1075,171253,-451,-176
chr2:128284156-128284518	chr2	+	128284177	128284501	True	NM_017969,NM_001080527	chr2,chr2	-,+	IWS1,MYO7B	-90,8876
chr21:37836864-37837928	chr21	+	37837009	37837925	True	NM_012130,NM_005441	chr21,chr21	-,+	CLDN14,CHAF1B	851,-79379
chr1:62661630-62661889	chr1	+	62661777	62661857	True	NM_181712,NM_001164835,NM_019079	chr1,chr1,chr1	-,+,+	KANK4,L1TD1,L1TD1	123284,-1360,-1360
chr1:38262510-38263557	chr1	+	38262593	38262773	True	NM_001031740,NM_152496,NM_001113482,NM_024640	chr1,chr1,chr1,chr1	+,+,+,-	MANEAL,MANEAL,MANEAL,YRDC	-2870,-1484,-2870,11156
chr18:24411703-24411934	chr18	+	24411754	24411980	True	NM_004028,NR_026908	chr18,chr18	-,+	AQP4,C18orf16	30645,33291
chr3:57186967-57188955	chr3	+	57187005	57188999	True	NM_012096,NM_017563	chr3,chr3	+,-	APPL1,IL17RD	72765,10454
chr2:151342842-151343484	chr2	+	151342887	151343456	True	NM_007115,NM_005168	chr2,chr2	+,-	TNFAIP6,RND3	870649,774
chr17:48555563-48555869	chr17	+	48555585	48555889	True	NM_018346,NM_001267	chr17,chr17	+,-	RSAD1,CHAD	300,-9358
chr11:58939383-58939637	chr11	+	58939389	58939475	True	NM_001039396,NM_015177	chr11,chr11	-,+	MPEG1,DTX4	41069,336
chr9:19050535-19052286	chr9	+	19050748	19051885	True	NM_006570,NR_003009	chr9,chr9	+,-	RRAGA,SCARNA8	-1428,11961
chr2:201936467-201936728	chr2	+	201936550	201936752	True	NM_002491,NM_173822	chr2,chr2	+,-	NDUFB3,FAM126B	-152,-158
chr20:23731104-23731409	chr20	+	23731109	23731433	True	NM_001898,NR_001279	chr20,chr20	-,+	CST1,CSTT	191,-231377
chr2:95940625-95941750	chr2	+	95940634	95941736	True	NM_001165978,NM_144707,NM_032788,NM_001165977	chr2,chr2,chr2,chr2	+,+,-,+	PROM2,PROM2,ZNF514,PROM2	-484,-484,-115371,-484
chr1:21607605-21608280	chr1	+	21607811	21608183	True	NM_001113347,NM_032264,NM_001113349,NM_001397	chr1,chr1,chr1,chr1	-,+,-,-	ECE1,NBPF3,ECE1,ECE1	-1628,158447,8633,8849
chr1:22780739-22782261	chr1	+	22780755	22782176	True	NM_014870,NM_030761,NM_001083621	chr1,chr1,chr1	+,-,+	ZBTB40,WNT4,ZBTB40	-2462,-311236,-2462
chr4:184430352-184430757	chr4	+	184430353	184430555	True	NR_033995,NM_001564	chr4,chr4	-,+	LOC389247,ING2	-4685,-4192
chr22:47022565-47022830	chr22	+	47022669	47022803	True	NM_015124,NM_014246	chr22,chr22	+,-	GRAMD4,CELSR1	-62,-89602
chr4:4290371-4291556	chr4	+	4290528	4291424	True	NM_017816,NM_145291,NM_001145725	chr4,chr4,chr4	-,+,-	LYAR,ZBTB49,LYAR	522,499,374
chr1:90097251-90097979	chr1	+	90097266	90097893	True	NR_033981,NM_032270	chr1,chr1	-,+	FLJ27354,LRRC8C	611,750
chr5:173158227-173158990	chr5	+	173158243	173158949	True	NR_027109,NM_138369	chr5,chr5	+,-	LOC285593,BOD1	-151644,-114577
chr20:25989229-25990221	chr9	+	44779352	44779402	True	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	210833,-1148622
chr1:161063054-161063662	chr1	+	161063136	161063633	True	NR_033386,NR_033385,NM_030916,NM_001007255,NM_152366	chr1,chr1,chr1,chr1,chr1	+,+,-,+,+	KLHDC9,KLHDC9,PVRL4,KLHDC9,KLHDC9	4517,4517,-3751,4547,4547
chr11:17374201-17374522	chr11	+	17374240	17374514	True	NM_000525,NM_001202439	chr11,chr11	-,+	KCNJ11,DKFZp686O24166	35742,-982
chr17:79520330-79520917	chr17	+	79520432	79520858	True	NR_033338,NM_012418,NM_025161	chr17,chr17,chr17	-,+,-	C17orf70,FSCN2,C17orf70	-1003,-25066,-1003
chrX:70933370-70933653	chrX	+	70933431	70933607	True	NR_034005,NM_001145140,NM_001145139	chrX,chrX,chrX	+,-,-	FLJ46446,CXorf49,CXorf49B	-16436,4578,4578
chrX:70933370-70933653	chrX	-	70987667	70987843	False	NR_001568,NM_001145140,NM_001145139	chrX,chrX,chrX	-,+,+	BCYRN1,CXorf49,CXorf49B	-38705,-4578,-4578
chr2:181850005-181850667	chr2	+	181850031	181850711	True	NM_001030311,NM_006357,NM_182678	chr2,chr2,chr2	-,+,+	CERKL,UBE2E3,UBE2E3	671178,-4741,-4971
chr3:154843128-154844642	chr3	+	154843541	154844496	True	NM_007289,NR_037902	chr3,chr3	+,-	MME,LOC100507537	-45520,167043
chr11:67082111-67083195	chr11	+	67082642	67083060	True	NM_021173,NR_024469	chr11,chr11	-,+	POLD4,LOC100130987	38042,2249
chr8:15407698-15408271	chr8	+	15407804	15408080	True	NM_139167,NM_178234	chr8,chr8	-,+	SGCZ,TUSC3	-312012,-10260
chr7:16624546-16625115	chr7	+	16624805	16625065	True	NM_001195280,NM_020319	chr7,chr7	+,-	LOC100506049,ANKMY2	-58358,60427
chr18:11697256-11697662	chr18	+	11697571	11697701	True	NM_023075,NM_182978	chr18,chr18	-,+	MPPE1,GNAL	210990,-8486
chr7:99953914-99954282	chr7	+	99953923	99954279	True	NM_178238,NR_003613	chr7,chr7	+,-	PILRB,PMS2P1	1346,-19993
chr11:125356633-125357553	chr11	+	125356657	125357571	True	NM_005103,NM_001007277,NM_022549	chr11,chr11,chr11	-,+,-	FEZ1,EI24,FEZ1	8699,81726,8699
chr17:32909290-32909515	chr17	+	32909311	32909533	True	NM_207454,NM_207313	chr17,chr17	-,+	C17orf102,TMEM132E	-2923,-1594
chr13:45563928-45564735	chr13	+	45564053	45564752	True	NM_012345,NM_018559	chr13,chr13	-,+	NUFIP1,KIAA1704	-440,-417
chr5:7397754-7397991	chr5	+	7397753	7398007	True	NR_033906,NM_020546	chr5,chr5	-,+	LOC442132,ADCY2	-90926,-1472
chr9:139442581-139443336	chr9	+	139442640	139443194	True	NM_017617,NM_152571	chr9,chr9	-,+	NOTCH1,C9orf163	-2402,-64744
chr6:168606023-168606437	chr6	+	168606171	168606315	True	NM_214462,NM_030615	chr6,chr6	-,+	DACT2,KIF25	114137,-187669
chr15:65341753-65342364	chr15	+	65341856	65342230	True	NM_016563,NM_178859	chr15,chr15	-,+	RASL12,OSTBETA	18208,-4199
chr16:31574516-31574809	chr16	+	31574564	31574802	True	NR_027011,NM_016633	chr16,chr16	-,+	CSDAP1,AHSP	6093,-35412
chr16:31574516-31574809	chr16	-	31805255	31805305	False	NR_027011,NM_003414	chr16,chr16	-,+	CSDAP1,ZNF267	-224410,79773
chr5:32444692-32444929	chr5	+	32444697	32444779	True	NM_016107,NM_006713	chr5,chr5	-,+	ZFR,SUB1	115,140825
chr3:11759627-11760570	chr3	+	11759967	11760481	True	NM_014667,NM_003178	chr3,chr3	-,+	VGLL4,SYN2	1797,285380
chr6:150324294-150326054	chr6	+	150324403	150326003	True	NR_024045,NM_025218	chr6,chr6	-,+	RAET1K,ULBP1	327,-39311
chr2:34216118-34216803	chr2	+	34216284	34216667	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-477404,-263000
chr19:38714461-38714679	chr19	+	38714466	38714622	True	NM_001135156,NM_004647,NM_001135155,NM_001166103	chr19,chr19,chr19,chr19	-,-,-,+	DPF1,DPF1,DPF1,SPINT2	5745,318,318,40475
chr9:118506580-118507385	chr9	+	118506582	118507414	True	NM_002581,NR_024032	chr9,chr9	+,-	PAPPA,C9orf27	408656,180013
chrX:83702156-83702657	chrX	+	83702428	83702648	True	NM_001177478,NR_024062	chrX,chrX	-,+	HDX,UBE2DNL	54889,486508
chr2:97756876-97757344	chr2	+	97756930	97757390	True	NM_199336,NM_001164315	chr2,chr2	-,+	FAHD2B,ANKRD36	3242,21842
chr2:97756876-97757344	chr2	-	96071359	96071723	False	NM_001164464,NM_016044	chr2,chr2	-,+	TRIM43B,FAHD2A	78810,-2962
chr6:13710594-13710886	chr6	+	13710702	13710926	True	NM_005493,NM_016167	chr6,chr6	-,+	RANBP9,NOL7	920,-95194
chr6:112079529-112080217	chr6	+	112079544	112080214	True	NR_034109,NM_153048	chr6,chr6	+,-	LOC643749,FYN	-274931,121
chr9:95621231-95622740	chr9	+	95621719	95622608	True	NM_001007101,NR_026868	chr9,chr9	-,+	ZNF484,ANKRD19	17715,-49877
chr15:34780258-34781290	chr15	+	34780586	34781285	True	NM_175741,NR_036050	chr15,chr15	+,-	C15orf55,MIR1233-1	-142574,39338
chr5:115386947-115387904	chr5	+	115386993	115387631	True	NR_033363,NM_001195581	chr5,chr5	-,+	ATG12,LOC644100	-209445,46
chr10:88984604-88986045	chr10	+	88984770	88985944	True	NM_001099338,NR_024397	chr10,chr10	+,-	FAM22A,LOC728190	70,116421
chr10:88984604-88986045	chr10	+	52436809	52436859	False	NM_147156,NM_001079516	chr10,chr10	-,+	SGMS1,ASAH2B	-53072,62848
chr10:88984604-88986045	chr10	+	89116990	89117744	False	NM_001009610,NR_024397	chr10,chr10	+,-	FAM22D,LOC728190	122,-14675
chr10:88984604-88986045	chr10	+	81462548	81463302	False	NR_027512,NM_001098668	chr10,chr10	+,-	LOC650623,SFTPA2	-19881,-142385
chr10:88984604-88986045	chr10	+	81600981	81601433	False	NR_029407,NM_003019	chr10,chr10	+,-	LOC642361,SFTPD	-15386,107478
chr2:20865328-20865550	chr2	+	20865386	20865530	True	NM_022460,NM_182828	chr2,chr2	-,+	HS1BP3,GDF7	-14522,893
chr6:170865797-170866746	chr6	+	170865882	170866364	True	NM_001172085,NM_002793	chr6,chr6	+,-	TBP,PSMB1	-2520,-3465
chr15:67558917-67559856	chr15	+	67559016	67559891	True	NM_001031715,NM_024666	chr15,chr15	+,-	IQCH,AAGAB	-11942,-11942
chr19:50180510-50180714	chr19	+	50180519	50180631	True	NM_001571,NM_198318,NM_001536,NR_033397	chr19,chr19,chr19,chr19	-,+,+,+	IRF3,PRMT1,PRMT1,PRMT1	-11387,-74,-74,-74
chr19:52408407-52409759	chr19	+	52408477	52409638	True	NM_023074,NM_001031721	chr19,chr19	-,+	ZNF649,ZNF613	-172,21049
chr2:198303830-198304270	chr2	+	198303958	198304018	True	NM_025147,NM_001005526,NM_012433	chr2,chr2,chr2	+,-,-	COQ10B,SF3B1,SF3B1	14212,-4187,-4187
chr17:79830860-79831267	chr17	+	79830874	79831200	True	NM_001185077,NM_001002244,NM_004309,NM_001185078	chr17,chr17,chr17,chr17	-,+,-,-	ARHGDIA,ANAPC11,ARHGDIA,ARHGDIA	-2084,18398,-1592,-1592
chr7:6311016-6311392	chr7	+	6311016	6311333	True	NM_006908,NM_004227	chr7,chr7	+,-	RAC1,CYTH3	102792,960
chr1:222721338-222721742	chr1	+	222721339	222721717	True	NM_024746,NM_198551	chr1,chr1	-,+	HHIPL2,MIA3	-73,69726
chr9:74762213-74763159	chr9	+	74762411	74763193	True	NM_004293,NM_001128618	chr9,chr9	+,-	GDA,C9orf57	1099,-86890
chr4:141075499-141077300	chr4	+	141075688	141077035	True	NM_018717,NM_032547	chr4,chr4	-,+	MAML3,SCOC	-455,101404
chr10:121397926-121398578	chr10	+	121398179	121398454	True	NM_004281,NM_003252	chr10,chr10	+,-	BAG3,TIAL1	12427,-41638
chr12:122148562-122149294	chr12	+	122148692	122148940	True	NM_173855,NM_001080825	chr12,chr12	-,+	MORN3,TMEM120B	-41132,1717
chr14:88733873-88734635	chr14	+	88734069	88734563	True	NM_001040428,NM_138318	chr14,chr14	+,-	SPATA7,KCNK10	117424,2742
chr9:101718393-101720368	chr9	+	101718976	101720346	True	NM_173551,NM_001855	chr9,chr9	-,+	ANKS6,COL15A1	-160182,-12889
chr4:176737264-176738101	chr4	+	176737583	176737876	True	NM_170710,NM_201591	chr4,chr4	+,-	WDR17,GPM6A	249108,-3401
chr12:56322795-56323329	chr12	+	56322945	56323312	True	NM_001345,NM_032345,NM_001143853,NM_201554,NM_201444,NM_201445	chr12,chr12,chr12,chr12,chr12,chr12	+,-,-,+,+,+	DGKA,WIBG,WIBG,DGKA,DGKA,DGKA	1633,-1248,-2036,2499,2499,2499
chr10:129706311-129707741	chr10	+	129706408	129707710	True	NM_006504,NM_152311	chr10,chr10	+,-	PTPRE,CLRN3	-1134,-15197
chr6:45346042-45347457	chr6	+	45346049	45347315	True	NM_004348,NM_181356,NM_003599	chr6,chr6,chr6	+,-,-	RUNX2,SUPT3H,SUPT3H	42598,-379,-474
chr18:13218996-13219465	chr18	+	13219002	13219338	True	NM_002828,NM_181482,NM_181481	chr18,chr18,chr18	-,+,+	PTPN2,C18orf1,C18orf1	-334668,-267,-267
chr1:86173342-86174040	chr1	+	86173344	86174076	True	NM_001554,NM_001170670,NM_017953	chr1,chr1,chr1	+,-,-	CYR61,ZNHIT6,ZNHIT6	-126954,90,90
chr17:4736085-4736596	chr17	+	4736351	4736551	True	NM_001024937,NM_182566,NM_170663,NM_153827,NM_015716	chr17,chr17,chr17,chr17,chr17	+,-,+,+,+	MINK1,VMO1,MINK1,MINK1,MINK1	83,-46622,83,83,83
chr2:113933294-113933724	chr2	+	113933403	113933643	True	NM_012455,NM_003466	chr2,chr2	+,-	PSD4,PAX8	-1894,102905
chr11:62539168-62539713	chr11	+	62539246	62539504	True	NM_006473,NM_024784	chr11,chr11	+,-	TAF6L,ZBTB3	-422,-17590
chr2:84769055-84770002	chr2	+	84769064	84770003	True	NM_003849,NM_001370	chr2,chr2	-,+	SUCLG1,DNAH6	-82478,-25537
chr11:915025-915249	chr11	+	915082	915296	True	NM_012305,NM_001142675,NM_001142674,NM_001142677,NM_001142676,NM_023947	chr11,chr11,chr11,chr11,chr11,chr11	+,-,-,-,-,-	AP2A2,CHID1,CHID1,CHID1,CHID1,CHID1	10544,-24,-4208,-4208,-4208,-4208
chr6:88127992-88128684	chr6	+	88128054	88128476	True	NM_001031743,NM_198568	chr6,chr6	+,-	C6orf165,GJB7	-10427,-89058
chr13:64312796-64313930	chr13	+	64312921	64313356	True	NM_022843,NR_002171	chr13,chr13	-,+	PCDH20,OR7E156P	-2323266,-1404
chr6:138733310-138734616	chr6	+	138733433	138734442	True	NR_036099,NM_014320	chr6,chr6	-,+	MIR3145,HEBP2	22047,-8148
chr2:24404548-24404982	chr2	+	24404740	24405024	True	NM_001040710,NM_199346	chr2,chr2	+,-	C2orf84,PFN4	-6826,-58589
chr17:6946226-6946426	chr17	+	6946261	6946329	True	NM_201566,NM_153357	chr17,chr17	+,-	SLC16A13,SLC16A11	-6918,963
chr7:108210766-108212350	chr7	+	108210955	108212302	True	NM_001130475,NM_182529,NM_012328	chr7,chr7,chr7	-,-,+	THAP5,THAP5,DNAJB9	-788,-1058,-817
chrX:16157515-16158548	chrX	+	16157800	16158309	True	NM_005314,NM_003916	chrX,chrX	+,-	GRPR,AP1S2	-16435,-284700
chr5:156569567-156569775	chr5	+	156569656	156569738	True	NM_004270,NM_001100816,NM_005546	chr5,chr5,chr5	-,-,+	MED7,MED7,ITK	233,98,38168
chr12:50899258-50900391	chr12	+	50899531	50900423	True	NM_173602,NM_001145475	chr12,chr12	+,-	DIP2B,FAM186A	-814,-109126
chr4:10038495-10040372	chr4	+	10038767	10040420	True	NM_000798,NM_001001290	chr4,chr4	+,-	DRD5,SLC2A9	-255569,1502
chr16:1842956-1843304	chr16	+	1842975	1843215	True	NM_001146006,NR_027389,NM_012225,NM_004970	chr16,chr16,chr16,chr16	-,-,+,-	IGFALS,IGFALS,NUBP2,IGFALS	569,1744,-10093,569
chr1:27974283-27974523	chr1	+	27974305	27974399	True	NM_001143912,NM_005248	chr1,chr1	+,-	FAM76A,FGR	78090,-12578
chr14:24564130-24565538	chr14	+	24564210	24565420	True	NM_001018073,NM_006177,NM_004563	chr14,chr14,chr14	+,-,+	PCK2,NRL,PCK2	-778,-10378,-778
chr17:76624748-76624971	chr17	+	76624772	76624944	True	NM_173628,NM_024419	chr17,chr17	-,+	DNAH17,PGS1	-51296,-250088
chrX:24649198-24649996	chrX	+	24649525	24649807	True	NM_001163265,NM_016937	chrX,chrX	-,+	PCYT1B,POLA1	15698,62256
chr1:36347335-36348214	chr1	+	36347367	36348177	True	NM_012199,NM_022111	chr1,chr1	+,-	EIF2C1,CLSPN	632,-111816
chr1:178477622-178478834	chr1	+	178477627	178478773	True	NM_001170724,NM_032126,NM_001170722,NM_001170723,NM_004673	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	C1orf49,C1orf49,C1orf49,C1orf49,ANGPTL1	3438,3438,3438,3438,361492
chr7:74281083-74281521	chr7	+	74281149	74281220	True	NM_173537,NR_027775	chr7,chr7	-,+	GTF2IRD2,PMS2P5	-13308,25673
chr7:74281083-74281521	chr7	-	74495009	74495080	False	NM_030798,NM_001003795	chr7,chr7	-,+	WBSCR16,GTF2IRD2B	-5310,13266
chr5:168041694-168042516	chr5	+	168041741	168042446	True	NM_024594,NR_031721	chr5,chr5	-,+	PANK3,MIR103-1AS	-35127,-53883
chr3:38036058-38036307	chr3	+	38036065	38036357	True	NM_015873,NM_001130964	chr3,chr3	+,-	VILL,PLCD1	-1039,29973
chr1:161386492-161387655	chr1	+	161387285	161387533	True	NM_001136219,NM_001013625	chr1,chr1	+,-	FCGR2A,C1orf192	87671,-49621
chr6:84932058-84932938	chr6	+	84932202	84932811	True	NM_014895,NM_138409	chr6,chr6	-,+	KIAA1009,MRAP2	4583,-188844
chr17:19033610-19034303	chr17	+	19033917	19034197	True	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	-3193,-83581
chr17:19033610-19034303	chr17	-	18946974	18947024	False	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	83757,3362
chr20:46607493-46608493	chr20	+	46607631	46608435	True	NR_026958,NM_198596	chr20,chr20	+,-	LOC284749,SULF2	380218,-192271
chr10:128075787-128076231	chr10	+	128075862	128076119	True	NM_021641,NM_145235,NM_003474	chr10,chr10,chr10	-,+,-	ADAM12,FANK1,ADAM12	1058,-490805,1058
chr2:172271953-172273437	chr2	+	172272290	172273379	True	NM_024770,NM_001164821	chr2,chr2	-,+	METTL8,DCAF17	17983,17381
chr13:53193421-53193910	chr13	+	53193725	53193785	True	NM_001011724,NM_001011725,NM_001011705	chr13,chr13,chr13	+,+,-	HNRNPA1L2,HNRNPA1L2,LECT1	-2171,-2171,120212
chr11:36596080-36596947	chr11	+	36596286	36596968	True	NM_000448,NM_000536	chr11,chr11	+,-	RAG1,RAG2	-6774,22911
chr11:66024736-66025063	chr11	+	66024756	66024966	True	NM_001134775,NM_001134774,NM_001134776,NM_022822,NM_020470	chr11,chr11,chr11,chr11,chr11	+,+,+,+,-	KLC2,KLC2,KLC2,KLC2,YIF1A	-42,207,124,207,31722
chr1:68148685-68150175	chr1	+	68148727	68149999	True	NM_018841,NM_001924,NM_001199741,NM_001199742	chr1,chr1,chr1,chr1	-,+,+,+	GNG12,GADD45A,GADD45A,GADD45A	149212,860,860,860
chr7:128291252-128291892	chr7	+	128291793	128291857	True	NR_024368,NM_001708	chr7,chr7	+,-	FLJ45340,OPN1SW	-10549,124037
chr10:124033936-124034839	chr10	+	124033959	124034866	True	NM_017615,NM_144587	chr10,chr10	-,+	NSMCE4A,BTBD16	-299216,-3190
chr12:10087848-10088522	chr12	+	10087878	10088527	True	NM_138337,NM_001130711	chr12,chr12	+,-	CLEC12A,CLEC2A	35480,-2898
chr10:72018964-72019955	chr10	+	72019099	72019890	True	NM_022146,NM_004096	chr10,chr10	-,+	NPFFR1,EIF4EBP2	23611,143970
chr11:128377332-128377669	chr11	+	128377335	128377638	True	NM_001162422,NM_001167681	chr11,chr11	-,+	ETS1,FLI1	14618,186172
chr10:45408404-45408861	chr10	+	45408536	45408878	True	NR_033842,NM_001123376	chr10,chr10	-,+	LOC220980,TMEM72	46309,-1823
chr1:104067540-104068017	chr1	+	104067554	104068054	True	NM_001008218,NM_017619	chr1,chr1	-,+	AMY1B,RNPC3	170885,523
chr2:242716293-242716830	chr2	+	242716430	242716828	True	NM_005018,NM_022134	chr2,chr2	-,+	PDCD1,GAL3ST2	84280,-241
chr3:155593312-155594054	chr3	+	155593510	155594082	True	NM_003875,NM_004733	chr3,chr3	+,-	GMPS,SLC33A1	-5247,-21262
chr1:59250926-59251164	chr1	+	59250942	59251146	True	NM_002228,NR_034014,NR_034015	chr1,chr1,chr1	-,+,+	JUN,LOC100131060,LOC100131060	-1157,-170,-170
chr15:43809854-43810447	chr15	+	43809962	43810461	True	NM_002373,NM_005657	chr15,chr15	+,-	MAP1A,TP53BP1	-207,-7255
chr2:101617120-101617696	chr2	+	101617308	101617686	True	NM_001098577,NM_000993,NM_001099693,NM_001102426	chr2,chr2,chr2,chr2	+,+,+,-	RPL31,RPL31,RPL31,TBC1D8	1004,1004,1004,150210
chr7:48075641-48075863	chr7	+	48075691	48075879	True	NM_001030019,NM_001100159,NM_152782	chr7,chr7,chr7	-,+,-	SUN3,C7orf57,SUN3	-6975,-625,-6975
chr17:78236860-78237835	chr17	+	78236871	78237761	True	NM_000199,NM_020914,NM_020954	chr17,chr17,chr17	-,+,+	SGSH,RNF213,RNF213	-42672,-2255,-2255
chrX:51147641-51148307	chrX	+	51147670	51148144	True	NM_018159,NM_153183	chrX,chrX	-,+	NUDT11,NUDT10	91375,-72647
chr4:87808940-87810222	chr4	+	87808994	87810147	True	NM_144645,NM_001166693	chr4,chr4	-,+	C4orf36,AFF1	3489,46006
chr14:85998667-85999310	chr14	+	85998817	85999324	True	NM_013231,NM_000153	chr14,chr14	+,-	FLRT2,GALC	-2380,2460341
chr19:51414594-51415459	chr19	+	51414737	51415387	True	NM_004917,NM_005551	chr19,chr19	-,+	KLK4,KLK2	-743,-38099
chr17:80606321-80606878	chr17	+	80606325	80606926	True	NM_019613,NM_024619	chr17,chr17	-,+	WDR45L,FN3KRP	2,67655
chr12:80300733-80301533	chr12	+	80300904	80301373	True	NM_001143886,NM_173591	chr12,chr12	-,+	PPP1R12A,OTOGL	6375,301859
chr19:42387660-42388046	chr19	+	42387666	42388062	True	NM_198977,NM_001783,NM_021601,NM_004706,NM_199002,NM_173506	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,-	ARHGEF1,CD79A,CD79A,ARHGEF1,ARHGEF1,LYPD4	-450,-6527,-6527,-450,383,-39158
chr13:93900917-93902674	chr13	+	93901146	93902580	True	NM_001129889,NM_005708	chr13,chr13	-,+	DCT,GPC6	1229414,-22124
chr11:122077475-122078184	chr11	+	122077521	122078005	True	NM_032873,NR_024430	chr11,chr11	+,-	UBASH3B,MIR100HG	448392,-3751
chr1:152691481-152692521	chr1	+	152691488	152692454	True	NM_178351,NM_001024679	chr1,chr1	-,+	LCE1C,C1orf68	86703,117
chr17:77755046-77755518	chr17	+	77755156	77755428	True	NM_005189,NM_020649,NM_032647	chr17,chr17,chr17	+,-,+	CBX2,CBX8,CBX2	-3230,15537,-3230
chr9:100952547-100953505	chr9	+	100952577	100953327	True	NM_018946,NM_052820	chr9,chr9	+,-	NANS,CORO2A	-133670,1679
chrX:585091-585303	chrY	+	535137	535257	False	NM_006883,NM_000451,NM_013239	chrY,chrY,chrY	+,+,-	SHOX,SHOX,PPP2R3B	-112,-112,-237447
chrX:585091-585303	chrX	+	585137	585257	True	NM_006883,NM_000451,NM_013239	chrX,chrX,chrX	+,+,-	SHOX,SHOX,PPP2R3B	-112,-112,-237447
chr11:117748510-117750423	chr11	+	117748896	117750289	True	NM_001164837,NM_001204268,NM_022003,NM_001164832,NM_001164831,NM_001164836,NR_037907,NM_001558	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,-,-,-,+	FXYD6,FXYD6-FXYD2,FXYD6,FXYD6,FXYD6,FXYD6,FXYD6-FXYD2,IL10RA	-1150,-1150,-1150,-1150,-695,-1150,-1150,106816
chr12:45443336-45443924	chr12	+	45443341	45443970	True	NM_001004329,NM_001025356	chr12,chr12	-,+	DBX2,ANO6	962,165799
chr1:230883680-230883904	chr1	+	230883723	230883941	True	NM_016452,NM_000029,NM_006615	chr1,chr1,chr1	+,-,+	CAPN9,AGT,CAPN9	-613,-33387,-644
chr5:124231068-124231815	chr5	+	124231075	124231463	True	NM_004384,NM_020747	chr5,chr5	+,-	CSNK1G3,ZNF608	-1383333,-150270
chr6:17600201-17600433	chr6	+	17600206	17600446	True	NM_005124,NM_016255	chr6,chr6	-,+	NUP153,FAM8A1	106422,71
chr20:388142-388430	chr20	+	388215	388421	True	NM_144628,NM_031229,NM_006462	chr20,chr20,chr20	-,+,+	TBC1D20,RBCK1,RBCK1	54816,287,287
chr19:40596837-40597980	chr19	+	40596893	40597533	True	NM_001142577,NM_001010880,NM_178544,NM_001142578,NM_001142579	chr19,chr19,chr19,chr19,chr19	-,-,+,-,-	ZNF780A,ZNF780A,ZNF546,ZNF780A,ZNF780A	-48,-83,-94001,-48,-48
chr18:33270681-33271659	chr18	+	33270907	33271685	True	NM_194281,NM_020474	chr18,chr18	-,+	INO80C,GALNT1	-192952,-36433
chr2:85106597-85106952	chr2	+	85106638	85106994	True	NM_021103,NM_001080824	chr2,chr2	+,-	TMSB10,C2orf89	25768,1308
chr9:131450344-131451098	chr9	+	131450609	131451113	True	NM_052844,NM_001122821,NM_003011	chr9,chr9,chr9	-,+,+	WDR34,SET,SET	-31480,-4727,395
chr20:62366968-62367198	chr20	+	62366967	62367175	True	NM_020062,NM_003224,NM_017806	chr20,chr20,chr20	+,-,+	SLC2A4RG,ARFRP1,LIME1	4035,-27612,802
chr20:33101427-33102015	chr20	+	33101640	33101854	True	NM_080476,NM_014183	chr20,chr20	-,+	PIGU,DYNLRB1	163293,2349
chr15:25200351-25201035	chr15	+	25200436	25201074	True	NM_003097,NM_022804,NM_130838,NM_005678	chr15,chr15,chr15,chr15	+,+,-,+	SNRPN,SNURF,UBE3A,SNURF	-352,-417,449629,-352
chr1:161171574-161172029	chr1	+	161171641	161172069	True	NM_004550,NM_005099,NM_001166159	chr1,chr1,chr1	+,-,+	NDUFS2,ADAMTS4,NDUFS2	-2594,-2796,41
chr12:54691772-54692145	chr12	+	54691788	54692022	True	NM_001136023,NM_006163,NR_002944	chr12,chr12,chr12	-,-,+	NFE2,NFE2,HNRNPA1P10	2819,-2244,-17306
chr19:36632253-36632971	chr19	+	36632332	36632941	True	NM_001003962,NM_001864,NM_001749	chr19,chr19,chr19	+,-,+	CAPNS1,COX7A1,CAPNS1	-1465,10880,-1465
chr4:71525556-71526191	chr4	+	71525623	71526007	True	NM_144646,NM_020368	chr4,chr4	-,+	IGJ,UTP3	6391,28188
chr3:180705086-180706718	chr3	+	180705137	180706404	True	NM_001190233,NM_005087,NR_033725,NR_033724,NM_145261,NR_033721,NR_033723,NR_033722	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-,-,-	DNAJC19,FXR1,DNAJC19,DNAJC19,DNAJC19,DNAJC19,DNAJC19,DNAJC19	963,-74961,1219,1219,1219,1219,1219,1219
chr14:65170298-65170697	chr14	+	65170298	65170720	True	NM_015549,NM_001024858	chr14,chr14	+,-	PLEKHG3,SPTB	472,119196
chr2:231919911-231920263	chr2	+	231919959	231920133	True	NR_033879,NM_002807,NM_001191037,NR_034059	chr2,chr2,chr2,chr2	-,+,+,+	LOC348761,PSMD1,PSMD1,PSMD1	-59212,1444,1444,1444
chr7:76610564-76612087	chr7	+	76610588	76611941	True	NR_023383,NM_006682	chr7,chr7	+,-	PMS2P11,FGL2	-500,217266
chr7:76610564-76612087	chr7	+	76113029	76113827	False	NR_003262,NM_001102596	chr7,chr7	-,+	FDPSL2A,DTX2	-8712,-3253
chr1:1265865-1266176	chr1	+	1266013	1266077	True	NM_152228,NM_017871,NM_001029885	chr1,chr1,chr1	+,-,+	TAS1R3,CPSF3L,GLTPD1	648,-5967,-5921
chr3:156009803-156010489	chr3	+	156009872	156010245	True	NM_007107,NM_172159	chr3,chr3	-,+	SSR3,KCNAB1	262787,-1147
chr16:66785859-66787325	chr16	+	66785891	66787036	True	NM_005182,NM_006141	chr16,chr16	+,-	CA7,DYNC1LI2	91245,-366
chr19:15530019-15530628	chr19	+	15530212	15530658	True	NM_014371,NR_031716	chr19,chr19	-,+	AKAP8L,MIR1470	-379,29700
chr12:71118073-71118861	chr12	+	71118165	71118832	True	NM_130846,NM_014505	chr12,chr12	-,+	PTPRR,KCNMB4	29590,-358164
chr20:43536475-43537044	chr20	+	43536507	43537018	True	NM_006809,NM_001124756	chr20,chr20	-,+	TOMM34,PABPC1L	52146,1684
chr1:52106244-52107452	chr1	+	52106262	52107490	True	NR_036662,NM_001981	chr1,chr1	+,-	OSBPL9,EPS15	-23774,-121267
chr22:22018276-22018530	chr22	+	22018289	22018458	True	NM_148175,NM_148176,NM_014337,NM_001017964	chr22,chr22,chr22,chr22	+,+,+,-	PPIL2,PPIL2,PPIL2,YDJC	1814,1814,1814,-33949
chr5:118987143-118987944	chr5	+	118987225	118987975	True	NM_173666,NM_182761	chr5,chr5	-,+	DTWD2,FAM170A	-662985,-22034
chr17:56268992-56270795	chr17	+	56269100	56270844	True	NM_000502,NM_017777	chr17,chr17	+,-	EPX,MKS1	-4,25872
chr17:41175944-41176301	chr17	+	41175988	41176213	True	NM_005440,NM_006373	chr17,chr17	+,-	RND2,VAT1	1044,-1529
chr6:32599068-32600560	chr6_mcf_hap5	+	3938133	3939450	False	NM_020056,NM_002123	chr6_mcf_hap5,chr6_mcf_hap5	+,-	HLA-DQA2,HLA-DQB1	106894,29369
chr6:32599068-32600560	chr6_dbb_hap3	+	3880985	3882178	False	NM_020056,NM_002123	chr6_dbb_hap3,chr6_dbb_hap3	+,-	HLA-DQA2,HLA-DQB1	109547,31009
chr6:32599068-32600560	chr6_mann_hap4	+	4055418	4056611	False	NM_020056,NM_001198858	chr6_mann_hap4,chr6_mann_hap4	+,-	HLA-DQA2,HLA-DQB2	109709,131982
chr6:32599068-32600560	chr6_ssto_hap7	+	4032715	4034032	False	NM_020056,NM_002124	chr6_ssto_hap7,chr6_ssto_hap7	+,-	HLA-DQA2,HLA-DRB1	106798,-95885
chr6:32599068-32600560	chr6	+	32599257	32600587	True	NM_002122,NM_002123	chr6,chr6	+,-	HLA-DQA1,HLA-DQB1	4595,33929
chr8:21969131-21970271	chr8	+	21969152	21970286	True	NM_024815,NM_022749	chr8,chr8	-,+	NUDT18,FAM160B2	-2220,-22489
chr19:54759564-54760499	chr19	+	54759575	54760455	True	NM_001013,NM_001081442,NM_001081443,NM_006840	chr19,chr19,chr19,chr19	+,-,-,-	RPS9,LILRB5,LILRB5,LILRB5	-54900,762,762,762
chr2:101926477-101927201	chr2	+	101926550	101927223	True	NM_173647,NM_017546	chr2,chr2	-,+	RNF149,C2orf29	-1372,-57256
chr16:429560-430017	chr16	+	429683	430049	True	NM_021259,NM_006428,NR_024453	chr16,chr16,chr16	-,-,+	TMEM8A,MRPL28,LOC100134368	1951,-9114,2191
chr12:122658678-122659154	chr12	+	122658813	122659193	True	NM_001014336,NM_152759,NM_001098519	chr12,chr12,chr12	-,+,+	IL31,LRRC43,LRRC43	-67,-6598,8473
chr1:150665578-150667293	chr1	+	150665580	150667324	True	NM_018178,NR_036211	chr1,chr1	-,+	GOLPH3L,MIR4257	2398,-141239
chr10:6096162-6096373	chr10	+	6096266	6096378	True	NM_032905,NM_000417	chr10,chr10	+,-	RBM17,IL2RA	34570,8005
chr3:193260811-193262023	chr3	+	193261288	193261999	True	NM_032279,NM_015560	chr3,chr3	-,+	ATP13A4,OPA1	10755,48933
chr8:10382573-10382924	chr8	+	10382600	10382938	True	NM_001197020,NM_178857,NM_198464	chr8,chr8,chr8	+,-,+	PRSS55,RP1L1,PRSS55	117,129729,117
chr9:37904100-37904664	chr9	+	37904332	37904613	True	NM_024345,NM_033412,NR_024873,NR_024872	chr9,chr9,chr9,chr9	+,-,-,-	DCAF10,MCART1,MCART1,MCART1	-103593,18,18,18
chr2:128145780-128146884	chr2	+	128145853	128146874	True	NM_000312,NM_006609	chr2,chr2	+,-	PROC,MAP3K2	29121,-45083
chr17:56429781-56430147	chr17	+	56429810	56430196	True	NR_027647,NM_003168	chr17,chr17	+,-	LPO,SUPT4H1	-114074,-247
chr5:157099957-157100201	chr5	+	157099975	157100069	True	NM_001145132,NM_178424	chr5,chr5	+,-	C5orf52,SOX30	-1467,-20547
chr12:70760095-70760333	chr12	+	70760095	70760161	True	NM_002837,NM_014505	chr12,chr12	-,+	PTPRB,KCNMB4	243513,-84
chr7:80119833-80120907	chr7	+	80119833	80120696	True	NM_001102386,NM_001001547	chr7,chr7	-,+	GNAT3,CD36	20597,110807
chr3:194992079-194992305	chr3	+	194992132	194992324	True	NR_003265,NM_152531	chr3,chr3	+,-	SDHAP2,C3orf21	392585,-237
chr7:150754985-150755232	chr7	+	150755128	150755234	True	NM_004769,NM_001164410,NM_020321,NM_020322,NM_001199693,NM_001199692,NM_003040,NM_004935,NM_001199694	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,-,+,+,+,+,+,-,+	ACCN3,CDK5,ACCN3,ACCN3,SLC4A2,SLC4A2,SLC4A2,CDK5,SLC4A2	-9574,-76,-9574,-9574,4399,64,1422,-76,4504
chr4:37687415-37687663	chr4	+	37687414	37687709	True	NM_001085400,NM_018302,NM_001085399	chr4,chr4,chr4	-,+,-	RELL1,C4orf19,RELL1	340,-101610,340
chr19:35630726-35632071	chr19	+	35630749	35632090	True	NM_005031,NM_021902,NM_139284,NM_022006	chr19,chr19,chr19,chr19	+,+,-,+	FXYD1,FXYD1,LGI4,FXYD7	-408,-1068,-4571,2063
chr2:24587999-24588804	chr2	+	24588095	24588634	True	NM_001040710,NM_006277,NM_019595,NM_147152	chr2,chr2,chr2,chr2	+,-,-,-	C2orf84,ITSN2,ITSN2,ITSN2	-190174,-4698,-4698,-4698
chr4:17821115-17821994	chr4	+	17821412	17821836	True	NM_017741,NM_022346	chr4,chr4	-,+	DCAF16,NCAPG	-9031,-8940
chr15:40601567-40601832	chr15	+	40601582	40601792	True	NM_004573,NM_001145643	chr15,chr15	-,+	PLCB2,PHGR1	-1408,41441
chr16:2801163-2801920	chr16	+	2801613	2801943	True	NM_016333,NR_027274,NR_027275	chr16,chr16,chr16	+,-,-	SRRM2,LOC100128788,LOC100128788	386,-6815,708
chrY:22917102-22918074	chrY	+	22917250	22918017	True	NM_001039567,NR_001542	chrY,chrY	+,-	RPS4Y2,TTTY10	-2,-236136
chr11:9596402-9596722	chr11	+	9596415	9596771	True	NR_036539,NM_003390,NM_001143976	chr11,chr11,chr11	-,+,+	LOC644656,WEE1,WEE1	-114170,-1238,-232
chr11:49625515-49626930	chr11	+	49625787	49626970	True	NR_027044,NM_001005270	chr11,chr11	+,-	LOC440040,OR4C12	-45758,377153
chr3:185271097-185271377	chr3	+	185271226	185271354	True	NM_021627,NM_139248	chr3,chr3	+,-	SENP2,LIPH	32676,-857
chr10:105129029-105129274	chr10	+	105129029	105129099	True	NM_006951,NM_032154	chr10,chr10	+,-	TAF5,PCGF6	-1356,-18138
chr2:175629633-175629920	chr2	+	175629795	175629916	True	NM_024583,NM_000079,NM_001039523	chr2,chr2,chr2	+,-,-	SCRN3,CHRNA1,CHRNA1	-369389,-595,-595
chr20:8112596-8112899	chr20	+	8112598	8112948	True	NM_015192,NM_182734,NM_021156	chr20,chr20,chr20	+,+,-	PLCB1,PLCB1,TMX4	347,347,-112205
chr17:8648173-8648455	chr17	+	8648267	8648419	True	NM_001158261,NM_004822,NM_144681	chr17,chr17,chr17	-,+,-	CCDC42,NTN1,CCDC42	-113,276439,-113
chr7:100799367-100799897	chr7	+	100799527	100799931	True	NM_003378,NM_001283	chr7,chr7	-,+	VGF,AP1S1	8971,-1906
chr6:34710782-34711222	chr6	+	34711079	34711143	True	NM_024294,NM_003093	chr6,chr6	-,+	C6orf106,SNRPC	-46454,13727
chr21:33670618-33671248	chr21	+	33670710	33671162	True	NM_206898,NM_018944,NM_178817	chr21,chr21,chr21	+,-,+	MRAP,MIS18A,MRAP	-6637,-19334,-6637
chr1:67596447-67597020	chr1	+	67596526	67596737	True	NM_001013674,NM_144701	chr1,chr1	-,+	C1orf141,IL23R	-2306,35431
chr19:54325706-54327097	chr19	+	54327081	54327141	True	NM_144687,NR_029866	chr19,chr19	-,+	NLRP12,MIR373	557,-35173
chr10:30663589-30664228	chr10	+	30663735	30663930	True	NR_003524,NM_005204	chr10,chr10	-,+	LOC729668,MAP3K8	-358,58935
chr2:27302756-27303042	chr2	+	27302765	27303063	True	NM_007046,NM_006488,NM_000221,NM_001134693	chr2,chr2,chr2,chr2	+,+,+,-	EMILIN1,KHK,KHK,OST4	-1381,6547,6547,-8198
chr1:150945834-150946111	chr1	+	150945859	150946053	True	NM_003568,NM_022075,NM_181746	chr1,chr1,chr1	+,-,-	ANXA9,LASS2,LASS2	8445,1437,1437
chr10:99788718-99789494	chr10	+	99788794	99789460	True	NM_014472,NM_018058	chr10,chr10	+,-	C10orf28,CRTAC1	104920,1175
chrX:144322487-144324381	chrX	+	144322638	144324212	True	NR_030589,NM_001009614	chrX,chrX	-,+	MIR890,SPANXN1	751708,4894
chr3:51972775-51973002	chr3	+	51972774	51972950	True	NM_005485,NM_001003931,NM_004704	chr3,chr3,chr3	+,+,-	PARP3,PARP3,RRP9	3410,3410,3022
chr21:34182864-34183531	chr21	+	34182973	34183217	True	NM_001162496,NM_001162495,NM_019596,NR_024623	chr21,chr21,chr21,chr21	-,-,-,+	C21orf62,C21orf62,C21orf62,C21orf49	2886,2886,2886,-38613
chr18:14966734-14968728	chr18	+	14967127	14968761	True	NR_027417,NR_036153	chr18,chr18	-,+	LOC644669,MIR3156-2	357207,-137014
chr18:11633828-11635179	chr18	+	11633895	11634871	True	NM_023075,NM_182978	chr18,chr18	-,+	MPPE1,GNAL	273820,54264
chr9:130023985-130025742	chr9	+	130024232	130025738	True	NM_032293,NM_012098	chr9,chr9	+,-	GARNL3,ANGPTL2	1017,-139188
chrX:105947585-105948680	chrX	+	105947783	105948696	True	NM_024539,NM_001171706	chrX,chrX	+,-	RNF128,RIPPLY1	-10766,197916
chr4:69429182-69430300	chr4	+	69429308	69429980	True	NM_014058,NM_001077,NM_001076	chr4,chr4,chr4	+,-,-	TMPRSS11E,UGT2B17,UGT2B15	-116199,4327,4322
chr3:52489163-52489381	chr3	+	52489200	52489336	True	NM_003280,NM_007184	chr3,chr3	-,+	TNNC1,NISCH	-1143,187
chr1:13480657-13481473	chr1	+	13480790	13481279	True	NM_001045480,NM_001099790,NM_001099850	chr1,chr1,chr1	+,-,-	PRAMEF16,PRAMEF19,PRAMEF18	13974,-3221,-3221
chr1:13480657-13481473	chr1	+	13701627	13702116	False	NM_001099790,NM_001099850,NM_001099851	chr1,chr1,chr1	-,-,+	PRAMEF19,PRAMEF18,PRAMEF17	-3222,-3222,13971
chr6:79787725-79788048	chr6	+	79787741	79788043	True	NM_001010844,NM_017934	chr6,chr6	+,-	IRAK1BP1,PHIP	-210603,18
chr17:37781254-37781539	chr17	+	37781280	37781416	True	NM_181505,NM_006160,NM_032192	chr17,chr17,chr17	+,-,+	PPP1R1B,NEUROD2,PPP1R1B	3336,-17105,1762
chr12:8982142-8983260	chr12	+	8982315	8983225	True	NM_144670,NM_002355	chr12,chr12	+,-	A2ML1,M6PR	-7216,119079
chr1:55272576-55273108	chr1	+	55272657	55273055	True	NM_017904,NM_001114108,NM_152607,NM_001110533	chr1,chr1,chr1,chr1	-,-,+,+	TTC22,TTC22,C1orf177,C1orf177	-5716,-5716,-972,-972
chr19:44029944-44030525	chr19	+	44029948	44030514	True	NM_014297,NM_174945	chr19,chr19	-,+	ETHE1,ZNF575	932,6825
chr12:15104914-15105652	chr12	+	15104979	15105518	True	NM_001175,NM_006205	chr12,chr12	-,+	ARHGDIB,PDE6H	9102,20437
chr4:153439674-153440372	chr4	+	153439725	153440180	True	NM_033632,NR_033797	chr4,chr4	-,+	FBXW7,DKFZP434I0714	16046,17235
chr17:56604388-56605201	chr17	+	56604420	56604968	True	NM_002876,NM_004687,NM_004574,NM_080415,NM_080416,NR_037156,NR_037155	chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,-,-,-,-	RAD51C,MTMR4,SEPT4,SEPT4,SEPT4,SEPT4,SEPT4	164994,-9169,1860,4525,4525,456,1860
chr2:33824753-33825132	chr2	+	33824755	33825170	True	NM_015475,NM_015376	chr2,chr2	-,+	FAM98A,RASGRP3	-393,-85864
chr17:26989204-26989409	chr17	+	26989266	26989404	True	NM_006923,NM_003170	chr17,chr17	-,+	SDF2,SUPT6H	-333,-15
chr12:69979829-69980302	chr12	+	69979833	69980149	True	NR_037476,NR_037475,NM_006431,NM_001198842	chr12,chr12,chr12,chr12	+,-,+,+	MIR3913-2,MIR3913-1,CCT2,CCT2	-1381,-1230,-676,-422
chr22:29458955-29460013	chr22	+	29459115	29459829	True	NM_001039570,NM_032045,NM_015370	chr22,chr22,chr22	+,+,-	KREMEN1,KREMEN1,C22orf31	9236,9236,-1208
chr11:8586626-8587012	chr11	+	8586628	8587028	True	NM_000990,NM_030906	chr11,chr11	+,-	RPL27A,STK33	116966,28525
chr20:5099859-5100173	chr20	+	5099885	5100183	True	NM_001009923,NM_182649,NM_001009925,NM_001009924,NR_028370,NM_002592,NM_014145,NM_003818	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	-,-,-,-,+,-,-,+	C20orf30,PCNA,C20orf30,C20orf30,PCNA-AS1,PCNA,C20orf30,CDS2	-6152,514,-6152,-6152,48,7135,-6152,7298
chr4:119806170-119806394	chr4	+	119806179	119806428	True	NM_133477,NM_001128934,NM_001128933,NM_014822	chr4,chr4,chr4,chr4	+,+,+,-	SYNPO2,SYNPO2,SYNPO2,SEC24D	3567,3567,3567,-48853
chr14:21211563-21212716	chr14	+	21211864	21212759	True	NM_198232,NM_006683	chr14,chr14	-,+	RNASE1,EDDM3A	57856,1339
chr10:30640227-30641411	chr10	+	30640386	30641460	True	NM_018109,NM_005204	chr10,chr10	-,+	MTPAP,MAP3K8	-2119,81405
chr19:11459055-11459439	chr19	+	11459250	11459346	True	NM_001170635,NM_001080503,NM_022737,NM_198536,NM_001145416,NM_033408,NM_004283	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,-,-,-,-	LPPR2,CCDC159,LPPR2,TMEM205,TMEM205,TMEM205,RAB3D	6715,-2120,6715,-2269,-2269,-2269,-8906
chr2:105473367-105473609	chr2	+	105473367	105473495	True	NM_006236,NR_037883	chr2,chr2	+,-	POU3F3,LOC100506421	-1449,-5433
chr17:58503114-58503440	chr17	+	58503148	58503408	True	NM_181707,NM_032582	chr17,chr17	+,-	C17orf64,USP32	-3334,-33562
chr1:17768455-17769042	chr1	+	17768472	17768657	True	NM_001136204,NM_018715,NM_207421	chr1,chr1,chr1	-,-,+	RCC2,RCC2,PADI6	-3415,-2252,-69782
chr20:1163007-1163293	chr20	+	1163073	1163265	True	NM_018354,NM_001009612	chr20,chr20	-,+	C20orf46,C20orf202	1902,20832
chr10:15214022-15214432	chr10	+	15214256	15214479	True	NM_183005,NM_004808	chr10,chr10	+,-	RPP38,NMT2	-75131,-3561
chr1:177086058-177086424	chr1	+	177086063	177086469	True	NM_004319,NM_021165	chr1,chr1	-,+	ASTN1,FAM5B	47605,54163
chr19:10120097-10120849	chr19	+	10120367	10120689	True	NM_015719,NM_015725	chr19,chr19	-,+	COL5A3,RDH8	508,3235
chr12:56545375-56545643	chr12	+	56545377	56545637	True	NM_021019,NM_002475,NM_079423,NM_001130420,NM_001199629	chr12,chr12,chr12,chr12,chr12	+,+,+,-,+	MYL6,MYL6B,MYL6,SMARCC2,MYL6B	6407,566,6407,37764,566
chr3:13591120-13592043	chr3	+	13591406	13592026	True	NM_001004019,NM_001998,NM_024923	chr3,chr3,chr3	+,+,-	FBLN2,FBLN2,NUP210	-832,-832,-129597
chr2:203238621-203239289	chr2	+	203238832	203239124	True	NM_003352,NM_001204	chr2,chr2	-,+	SUMO1,BMPR2	-135510,1925
chr5:140025754-140026655	chr5	+	140025950	140026698	True	NM_001185012,NM_006083,NR_037428,NM_018502,NM_002488,NR_033697	chr5,chr5,chr5,chr5,chr5,chr5	-,+,+,+,-,-	NDUFA2,IK,MIR3655,TMCO6,NDUFA2,NDUFA2	732,685,730,-6990,732,732
chr19:47923424-47924041	chr19	+	47923463	47924023	True	NM_001009813,NM_014681,NM_020160	chr19,chr19,chr19	-,+,-	MEIS3,DHX34,MEIS3	-678,-70978,-678
chr4:106712404-106713698	chr4	+	106712692	106713687	True	NM_001031720,NM_020395	chr4,chr4	+,-	GSTCD,INTS12	-80774,-82811
chr16:69456994-69457592	chr16	+	69457027	69457639	True	NM_030579,NM_005652	chr16,chr16	+,-	CYB5B,TERF2	858,-37153
chr15:51915064-51915287	chr15	+	51915170	51915282	True	NM_001174117,NM_001174116,NM_015263,NM_001165257	chr15,chr15,chr15,chr15	-,-,-,+	DMXL2,DMXL2,DMXL2,SCG3	-203,-203,-203,58267
chr17:74863554-74863775	chr17	+	74863627	74863797	True	NM_144677,NM_198955,NM_001199172,NR_036608	chr17,chr17,chr17,chr17	+,+,+,-	MGAT5B,MGAT5B,MGAT5B,SRSF2	1000,4931,1000,-130134
chr1:33791061-33791818	chr1	+	33791133	33791848	True	NR_037400,NM_152493	chr1,chr1	-,+	MIR3605,ZNF362	6296,-69010
chr18:65184302-65184823	chr18	+	65184333	65184813	True	NM_032160,NR_033921	chr18,chr18	-,+	DSEL,LOC643542	-366,-601
chr6:167621396-167622611	chr6	+	167621524	167622560	True	NM_005299,NM_001145121	chr6,chr6	-,+	GPR31,TCP10L2	-50205,-37497
chr8:145584559-145584768	chr8	+	145584611	145584817	True	NM_024531,NM_012162,NR_015428,NM_024555	chr8,chr8,chr8,chr8	+,-,-,-	GPR172A,FBXL6,C8ORFK29,FBXL6	-2437,-2479,-6106,-2479
chr2:10443430-10443954	chr2	+	10443460	10443738	True	NM_134421,NM_002149,NR_036222	chr2,chr2,chr2	+,+,-	HPCAL1,HPCAL1,MIR4261	87,-471,-110663
chr15:35279941-35280415	chr15	+	35280011	35280411	True	NM_014106,NR_003144	chr15,chr15	-,+	ZNF770,LOC723972	136,249115
chr7:100301696-100302298	chr7	+	100301856	100302126	True	NM_005837,NM_022574	chr7,chr7	+,-	POP7,GIGYF1	1549,-14986
chr12:8543318-8544080	chr12	+	8543320	8543916	True	NM_001007033,NR_024420	chr12,chr12	+,-	CLEC6A,LOC389634	64674,28
chr4:128801241-128801786	chr4	+	128801483	128801834	True	NM_001190799,NM_001190801,NM_152778,NM_014264	chr4,chr4,chr4,chr4	+,+,-,+	PLK4,PLK4,MFSD8,PLK4	181,564,85355,181
chr15:21006394-21006694	chr15	+	21006589	21006739	True	NR_027992,NR_027411	chr15,chr15	-,+	BCL8,GOLGA8C	-45109,-238966
chr4:38779889-38781010	chr4	+	38780145	38781030	True	NM_001017388,NM_001195107,NM_001195106,NM_001195108,NM_030956,NM_138389	chr4,chr4,chr4,chr4,chr4,chr4	-,-,-,-,-,+	TLR10,TLR10,TLR10,TLR10,TLR10,FAM114A1	3634,3634,3634,3634,3634,88323
chr2:169098482-169098792	chr2	+	169098481	169098649	True	NM_203463,NM_013233	chr2,chr2	+,-	LASS6,STK39	214185,5506
chr12:11244872-11246099	chr12	+	11245134	11245956	True	NR_036583,NM_176884	chr12,chr12	+,-	LOC100129361,TAS2R43	77823,-222
chrX:100184301-100185200	chrX	+	100184476	100184817	True	NM_212559,NM_001012990	chrX,chrX	-,+	XKRX,ARL13A	-578,39879
chr1:204339500-204340104	chr1	+	204339612	204339796	True	NM_001204171,NR_027022	chr1,chr1	+,-	MDM4,LOC127841	145710,-765
chr2:20419037-20419549	chr2	+	20419101	20419579	True	NM_004040,NM_002997,NM_001006946	chr2,chr2,chr2	+,-,-	RHOB,SDC1,SDC1	227255,5398,5665
chr6:132126485-132127415	chr6	+	132126550	132127442	True	NM_006208,NM_001145659	chr6,chr6	+,-	ENPP1,CTAGE9	1713,-94393
chr5:137225893-137227494	chr5	+	137226012	137226946	True	NM_014386,NM_006805	chr5,chr5	+,-	PKD2L2,HNRNPA0	-944,-135973
chr5:96037229-96038301	chr5	+	96037531	96038265	True	NM_173060,NM_016442	chr5,chr5	+,-	CAST,ERAP1	227,105677
chr15:35588299-35589044	chr15	+	35588459	35588844	True	NR_003144,NR_037507	chr15,chr15	+,-	LOC723972,MIR3942	-58988,75778
chr13:32625536-32627172	chr13	+	32625620	32626579	True	NM_001136571,NM_023037	chr13,chr13	-,+	ZAR1L,FRY	259569,-20234
chr6:26046217-26047568	chr6	+	26046331	26047404	True	NM_005319,NM_021062,NM_003531	chr6,chr6,chr6	-,-,+	HIST1H1C,HIST1H2BB,HIST1H3C	9346,-2446,-743
chr11:67249968-67250177	chr11	+	67249991	67250190	True	NM_003977,NM_025124	chr11,chr11	+,-	AIP,TMEM134	314,-13260
chr4:95697096-95698896	chr4	+	95697480	95698856	True	NM_001203,NM_014485	chr4,chr4	+,-	BMPR1B,HPGDS	-18416,-433453
chr18:60190541-60190741	chr18	+	60190625	60190695	True	NM_176787,NM_017742	chr18,chr18	-,+	PIGN,ZCCHC2	-336336,-18
chr3:122176657-122177845	chr3	+	122176731	122177860	True	NM_014367,NM_019069	chr3,chr3	+,-	FAM162A,WDR5B	-73760,-41849
chr22:37549133-37549730	chr22	+	37549357	37549743	True	NM_000878,NM_024681	chr22,chr22	-,+	IL2RB,KCTD17	-3395,-101629
chr17:75369524-75369794	chr17	+	75369533	75369647	True	NM_001113494,NM_001113493,NR_036200	chr17,chr17,chr17	+,+,-	SEPT9,SEPT9,MIR4316	2517,-312,23539
chr16:29816740-29816959	chr16	+	29816855	29816943	True	NM_001042539,NM_145239,NM_002383,NM_006319	chr16,chr16,chr16,chr16	+,+,+,-	MAZ,PRRT2,MAZ,CDIPT	911,6465,911,57685
chr20:44097787-44098171	chr20	+	44097810	44098210	True	NM_006103,NM_006652	chr20,chr20	+,-	WFDC2,SPINT3	183,46104
chr8:7975392-7976423	chr8	+	7976258	7976322	True	NR_031689,NR_024362	chr8,chr8	-,+	MIR548I3,FLJ10661	-29647,109769
chr19:12511317-12511662	chr19	+	12511326	12511634	True	NM_001080821,NM_153358	chr19,chr19	-,+	ZNF799,ZNF791	504,210097
chr2:131862990-131863240	chr2	+	131863012	131863176	True	NM_001100623,NM_017958,NM_001009993	chr2,chr2,chr2	+,+,-	PLEKHB2,PLEKHB2,FAM168B	-643,-643,-12008
chr8:86866610-86867595	chr8	+	86866622	86867498	True	NR_003594	chr8	-	REXO1L2P	-26451
chr19:6505564-6506450	chr19	+	6506325	6506441	True	NM_003811,NM_006087	chr19,chr19	+,-	TNFSF9,TUBB4	24568,-3995
chr11:60873451-60874592	chr11	+	60873670	60874564	True	NM_017966,NM_014207	chr11,chr11	-,+	VPS37C,CD5	54402,-3791
chr19:55916500-55917235	chr19	+	55917055	55917152	True	NM_000991,NM_014501	chr19,chr19	+,-	RPL28,UBE2S	-19806,2224
chr7:148894723-148895371	chr7	+	148894962	148895210	True	NM_001001661,NM_003575	chr7,chr7	-,+	ZNF425,ZNF282	-71524,-2437
chr9:37486223-37486542	chr9	+	37486271	37486591	True	NM_022490,NM_014872	chr9,chr9	+,-	POLR1E,ZBTB5	-377,-20864
chr3:158447831-158448926	chr3	+	158448906	158448974	True	NM_206963,NM_002888,NM_001167903	chr3,chr3,chr3	-,-,+	RARRES1,RARRES1,MFSD1	1351,1351,70740
chr19:46286591-46286841	chr19	+	46286612	46286862	True	NM_004943,NM_004409,NM_001081563,NM_001081562,NM_001081560,NM_004497	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,+	DMWD,DMPK,DMPK,DMPK,DMPK,FOXA3	9248,-797,-2751,-797,-797,80655
chr18:611921-612428	chr18	+	611954	612318	True	NM_199167,NM_001012716	chr18,chr18	+,-	CLUL1,C18orf56	4381,46072
chr14:77269522-77271444	chr14	+	77269549	77271490	True	NM_015305,NM_194287	chr14,chr14	-,+	ANGEL1,C14orf166B	7851,21234
chr1:156183998-156184759	chr1	+	156184059	156184392	True	NM_001199654,NM_007221,NM_198406,NM_001199662,NM_001199663,NM_001199661,NM_001199653,NM_001199664	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,+,+,+,+,+	PMF1,PMF1,PAQR6,PMF1-BGLAP,PMF1-BGLAP,PMF1-BGLAP,PMF1,PMF1-BGLAP	-1331,-1331,33457,-1331,-1331,-1331,-1331,-1331
chr17:15598883-15599809	chr17	+	15599191	15599841	True	NM_006470,NM_001130842,NM_020652	chr17,chr17,chr17	-,+,+	TRIM16,ZNF286A,ZNF286A	-12998,3049,3049
chr17:15598883-15599809	chr17	-	18588764	18588840	False	NM_001145045,NM_001037330	chr17,chr17	-,+	ZNF286B,TRIM16L	-3192,36561
chr1:21996457-21996705	chr1	+	21996512	21996630	True	NM_002885,NM_001145657,NM_001013693	chr1,chr1,chr1	-,-,+	RAP1GAP,RAP1GAP,LDLRAD2	-656,-656,142127
chr11:128380791-128382460	chr11	+	128380846	128382284	True	NM_001162422,NM_001167681,NM_005238	chr11,chr11,chr11	-,+,-	ETS1,FLI1,ETS1	9982,181526,9982
chr11:61100789-61101119	chr11	+	61100954	61101150	True	NM_001923,NM_015533	chr11,chr11	-,+	DDB1,DAK	-288,-351
chr10:70939273-70939931	chr10	+	70939274	70939932	True	NM_001057,NM_003171	chr10,chr10	-,+	TACR2,SUPV3L1	236792,60
chr21:40819027-40819500	chr21	+	40819057	40819328	True	NM_152505,NM_007341,NM_001001713	chr21,chr21,chr21	-,+,+	LCA5L,SH3BGR,SH3BGR	-2929,4451,-1318
chr6:138428734-138429091	chr6	+	138428806	138429008	True	NM_022121,NM_020340	chr6,chr6	-,+	PERP,KIAA1244	-146,54044
chr6:31165490-31165905	chr6_dbb_hap3	+	2462939	2463013	False	NR_026816,NR_026791	chr6_dbb_hap3,chr6_dbb_hap3	-,+	PSORS1C3,HCG27	-20121,-313
chr6:31165490-31165905	chr6	+	31165799	31165873	True	NR_026816,NR_026791	chr6,chr6	-,+	PSORS1C3,HCG27	-20123,-313
chr6:31165490-31165905	chr6_ssto_hap7	+	2500744	2500818	False	NR_026816,NR_026791	chr6_ssto_hap7,chr6_ssto_hap7	-,+	PSORS1C3,HCG27	-20114,-313
chr6:31165490-31165905	chr6_cox_hap2	+	2680572	2680646	False	NR_026816,NR_026791	chr6_cox_hap2,chr6_cox_hap2	-,+	PSORS1C3,HCG27	-20125,-313
chr15:65810776-65811837	chr15	+	65810924	65811459	True	NM_130434,NM_017743,NM_197961,NM_197960,NM_016395	chr15,chr15,chr15,chr15,chr15	-,-,-,-,+	DPP8,DPP8,DPP8,DPP8,PTPLAD1	-889,-889,-889,-1315,11367
chr5:65464281-65465716	chr5	+	65464571	65465579	True	NR_028474,NM_139168	chr5,chr5	-,+	LOC100303749,SREK1	-223170,-23968
chr12:32112715-32112937	chr12	+	32112754	32112893	True	NM_018169,NM_001013699	chr12,chr12	+,-	C12orf35,H3F3C	-452,-167579
chr19:3774120-3774649	chr19	+	3774191	3774571	True	NM_032753,NM_172251	chr19,chr19	-,+	RAX2,MRPL54	-1972,-11577
chr3:186498570-186498992	chr3	+	186498729	186498884	True	NR_002989,NM_001967,NR_002588,NR_031650,NM_002916,NR_002587,NR_002586	chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,-,+,+	SNORA81,EIF4A2,SNORA4,MIR1248,RFC4,SNORD2,SNORA63	5579,2476,6517,5576,25469,3700,6203
chr16:34759284-34760471	chr16	+	34759420	34760300	True	NR_034019,NR_027079	chr16,chr16	-,+	LOC100130700,LOC283914	-18580,-161582
chr22:35850672-35852566	chr22	+	35850712	35852064	True	NM_005368,NM_006739	chr22,chr22	-,+	MB,MCM5	161378,-54647
chrX:133913313-133914325	chrX	+	133913472	133914259	True	NM_001170780,NM_001170756	chrX,chrX	+,-	FAM122C,FAM122B	16183,16185
chr16:30772881-30773098	chr16	+	30772920	30773092	True	NM_001195620,NM_014771,NM_001014979	chr16,chr16,chr16	-,+,-	C16orf93,RNF40,C16orf93	523,537,523
chr8:41386199-41386447	chr8	+	41386270	41386446	True	NM_152568,NM_032336	chr8,chr8	-,+	NKX6-3,GINS4	118482,278
chr7:56672634-56673057	chr7	+	56672668	56672950	True	NR_029420,NR_026929	chr7,chr7	-,+	LOC650226,DKFZp434L192	-156600,-108804
chr12:21720661-21720928	chr12	+	21720661	21720753	True	NM_030572,NM_021957	chr12,chr12	+,-	C12orf39,GYS2	-41463,37078
chr12:49465843-49466781	chr12	+	49466000	49466506	True	NM_144593,NM_005430	chr12,chr12	-,+	RHEBL1,WNT1	-2225,-93817
chr2:135812967-135813565	chr2	+	135813265	135813394	True	NM_025052,NM_012233,NM_001172435	chr2,chr2,chr2	-,+,+	YSK4,RAB3GAP1,RAB3GAP1	-31017,-3483,-3483
chr14:51138599-51139279	chr14	+	51138621	51139075	True	NM_021818,NM_181598	chr14,chr14	-,+	SAV1,ATL1	-3598,-111937
chr10:74649884-74650550	chr10	+	74649892	74650372	True	NM_152635,NM_032562	chr10,chr10	+,-	OIT3,PLA2G12B	2966,64188
chr3:42631019-42631449	chr3	+	42631193	42631481	True	NM_016305,NM_004206,NM_032970,NM_001201584	chr3,chr3,chr3,chr3	+,-,-,-	SS18L2,SEC22C,SEC22C,SEC22C	816,-7673,-7673,-7673
chr17:66594890-66596207	chr17	+	66595165	66596226	True	NM_212472,NM_017565	chr17,chr17	+,-	PRKAR1A,FAM20A	-86681,919
chr10:6096373-6097705	chr10	+	6096428	6097338	True	NM_032905,NM_000417	chr10,chr10	+,-	RBM17,IL2RA	33610,7045
chr17:55041255-55042008	chr17	+	55041423	55041624	True	NM_004645,NM_021626	chr17,chr17	-,+	COIL,SCPEP1	-3012,13843
chr13:114452327-114452761	chr13	+	114452438	114452734	True	NM_182614,NR_028064	chr13,chr13	+,-	FAM70B,LOC100130386	9481,1378
chr1:117454047-117454423	chr1	+	117454114	117454472	True	NM_020440,NM_001145635	chr1,chr1	+,-	PTGFRN,TRIM45	-1476,209989
chr17:72775355-72777200	chr17	+	72775402	72777207	True	NM_015654,NM_017728	chr17,chr17	-,+	NAT9,TMEM104	-2932,-2831
chr16:31413355-31413630	chr16	+	31413431	31413547	True	NM_005353,NM_005205	chr16,chr16	+,-	ITGAD,COX6A2	-8849,26252
chr17:39782130-39782680	chr17	+	39782139	39782597	True	NM_005801,NM_000422	chr17,chr17	+,-	EIF1,KRT17	62529,-1257
chr17:43650024-43650686	chr17_ctg5_hap1	+	263317	263509	False	NM_001006607,NM_016632	chr17_ctg5_hap1,chr17_ctg5_hap1	-,+	LRRC37A2,ARL17A	-22648,-27236
chr17:43650024-43650686	chr17_ctg5_hap1	+	481261	481453	False	NM_001193465,NM_014834	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	KIAA1267,LRRC37A	82044,-22657
chr17:43650024-43650686	chr17	+	43650101	43650499	True	NR_026901,NR_037772	chr17,chr17	-,+	LOC644172,CRHR1	29299,47210
chr17:43650024-43650686	chr17	-	65834115	65834167	False	NM_182641,NM_181655	chr17,chr17	+,-	BPTF,C17orf58	-12388,155650
chr17:43650024-43650686	chr17	-	44567201	44567393	False	NM_001006607,NM_016632	chr17,chr17	+,-	LRRC37A2,ARL17A	22682,89745
chrX:103265901-103267618	chrX	+	103265900	103267540	True	NM_001002916,NM_001164416	chrX,chrX	-,+	H2BFWT,H2BFM	773,26975
chr20:25567502-25569309	chr20	+	25568020	25569330	True	NM_025176,NM_021067	chr20,chr20	-,+	NINL,GINS1	-1867,-179755
chr6:34392505-34392792	chr6	+	34392610	34392686	True	NM_001204091,NM_001203245,NM_020804,NM_001202470,NM_001014	chr6,chr6,chr6,chr6,chr6	-,-,+,-,-	RPS10,RPS10,PACSIN1,RPS10-NUDT3,RPS10	1266,1182,41166,1266,1266
chr11:10327351-10327557	chr11	+	10327392	10327548	True	NM_030962,NM_001124	chr11,chr11	-,+	SBF2,ADM	-11638,-801
chr11:116970977-116972307	chr11	+	116971231	116972143	True	NM_025164,NM_002572	chr11,chr11	-,+	SIK3,PAFAH1B2	-2238,42856
chr6:32551714-32552024	chr6	+	32551920	32551994	True	NM_002124,NM_002122	chr6,chr6	-,+	HLA-DRB1,HLA-DQA1	5618,53188
chr17:80230663-80230902	chr17	+	80230669	80230739	True	NM_001893,NM_001042423,NM_139062	chr17,chr17,chr17	-,+,-	CSNK1D,SLC16A3,CSNK1D	905,-40576,905
chr5:169724625-169726182	chr5	+	169724780	169726045	True	NM_005565,NR_026945	chr5,chr5	-,+	LCP2,LOC257358	42,32389
chr19:38270085-38270319	chr19	+	38270085	38270299	True	NM_001172689,NM_001172690,NM_001172691,NM_001172692,NM_015073,NM_152360	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,+,-	ZNF573,ZNF573,ZNF573,ZNF573,SIPA1L3,ZNF573	-19,-19,-19,-19,127568,-19
chr4:78784914-78786134	chr4	+	78785086	78785994	True	NM_020236,NM_144571	chr4,chr4	+,-	MRPL1,CNOT6L	-1339,-44542
chr18:66534169-66534520	chr18	+	66534169	66534447	True	NM_024781,NM_019022	chr18,chr18	+,-	CCDC102B,TMX3	-68903,-151816
chr12:56415345-56416742	chr12	+	56415566	56416504	True	NM_006928,NM_022465	chr12,chr12	-,+	PMEL,IKZF4	-55070,-928
chr11:46613654-46614181	chr11	+	46613800	46614037	True	NM_017749,NM_001205120	chr11,chr11	-,+	AMBRA1,ATG13	-886,24788
chr8:144947905-144948219	chr8	+	144947998	144948198	True	NM_000837,NM_031308	chr8,chr8	+,-	GRINA,EPPK1	116027,-564
chr11:45917422-45918165	chr11	+	45917525	45918136	True	NM_005456,NM_001080446	chr11,chr11	+,-	MAPK8IP1,C11orf94	-10374,10747
chr3:140773662-140774792	chr3	+	140773818	140774719	True	NM_001178140,NM_080862	chr3,chr3	-,+	TFDP2,SPSB4	944561,-3126
chr11:73499782-73501205	chr11	+	73500033	73500933	True	NM_198896,NM_016055	chr11,chr11	-,+	RAB6A,MRPL48	-27832,-1167
chr15:45880952-45882764	chr15	+	45881041	45882490	True	NM_012388,NM_013309	chr15,chr15	+,-	PLDN,SLC30A4	-1676,-66039
chr1:176449238-176449730	chr1	+	176449283	176449769	True	NM_020318,NM_022457	chr1,chr1	+,-	PAPPA2,RFWD2	-17027,-272913
chr22:41938726-41939547	chr22	+	41939024	41939358	True	NM_001018050,NM_001018052,NM_014460,NM_138338	chr22,chr22,chr22,chr22	-,-,+,-	POLR3H,POLR3H,CSDC2,POLR3H	1171,1171,17655,1168
chr2:176988904-176989356	chr2	+	176988903	176989216	True	NM_002148,NM_019558,NM_014213,NM_001080458,NM_001199747,NM_001199746	chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,-,+,+	HOXD10,HOXD8,HOXD9,EVX2,HOXD8,HOXD8	-7462,5251,-1541,-40213,5205,5251
chr21:40760369-40760655	chr21	+	40760415	40760511	True	NM_004627,NM_004965,NM_001146218	chr21,chr21,chr21	+,-,+	WRB,HMGN1,WRB	-8253,-39368,-774
chr4:109572036-109572722	chr4	+	109572094	109572740	True	NR_026968,NM_021227	chr4,chr4	-,+	LOC285456,OSTC	-30481,-404
chr2:86089439-86090311	chr2	+	86089632	86090356	True	NM_032827,NM_001042437	chr2,chr2	+,-	ATOH8,ST3GAL5	-108774,4487
chr5:137668009-137668274	chr5	+	137668092	137668234	True	NM_001135647,NM_001790,NM_022809,NM_016605	chr5,chr5,chr5,chr5	+,-,-,+	FAM53C,CDC25C,CDC25C,FAM53C	4989,-576,-576,5469
chr19:7767117-7767372	chr19	+	7767141	7767295	True	NM_001042461,NM_002002	chr19,chr19	+,-	TRAPPC5,FCER2	-21436,-109
chr6:32076669-32077007	chr6_mcf_hap5	+	3456523	3456817	False	NM_138717,NM_019105	chr6_mcf_hap5,chr6_mcf_hap5	+,-	PPT2,TNXB	44234,212
chr6:32076669-32077007	chr6_dbb_hap3	+	3355869	3356163	False	NM_138717,NM_019105	chr6_dbb_hap3,chr6_dbb_hap3	+,-	PPT2,TNXB	44238,212
chr6:32076669-32077007	chr6	+	32076695	32076989	True	NM_138717,NM_019105	chr6,chr6	+,-	PPT2,TNXB	44239,212
chr6:32076669-32077007	chr6_cox_hap2	+	3547357	3547651	False	NM_138717,NM_019105	chr6_cox_hap2,chr6_cox_hap2	+,-	PPT2,TNXB	44245,212
chr19:46662182-46662622	chr19	+	46662236	46662644	True	NM_001135113,NM_207393	chr19,chr19	+,-	IGFL2,IGFL3	-10787,-34305
chr7:73624270-73624998	chr7	+	73624335	73624997	True	NM_032463,NM_032464,NM_014146,NM_002914	chr7,chr7,chr7,chr7	+,+,+,-	LAT2,LAT2,LAT2,RFC2	-299,-299,-299,43791
chr7:97737099-97737936	chr7	+	97737139	97737833	True	NM_006188,NM_014916	chr7,chr7	-,+	OCM2,LMTK2	-117723,-994
chr13:37006839-37007116	chr13	+	37006846	37007085	True	NM_001111046,NM_001142294,NM_003914,NM_001111047,NM_001111045	chr13,chr13,chr13,chr13,chr13	+,-,+,+,+	CCNA1,SPG20,CCNA1,CCNA1,CCNA1	-930,-62529,-488,-930,-488
chr9:92089746-92089965	chr9	+	92089811	92089947	True	NM_006378,NM_006705,NM_001142287	chr9,chr9,chr9	-,+,-	SEMA4D,GADD45G,SEMA4D	4714,129979,4714
chr20:23114499-23114725	chr20	+	23114524	23114616	True	NR_034149,NM_001052	chr20,chr20	-,+	LOC200261,SSTR4	-1251,-98518
chr4:5020557-5021316	chr4	+	5020593	5021356	True	NM_018659,NM_018401	chr4,chr4	-,+	CYTL1,STK32B	-109,32170
chr13:25338468-25338718	chr13	+	25338531	25338699	True	NM_018451,NM_001184993,NM_031277	chr13,chr13,chr13	-,+,+	CENPJ,RNF17,RNF17	158436,-281,-281
chr1:169995009-169995413	chr1	+	169995093	169995315	True	NM_001136107,NM_001204517	chr1,chr1	+,-	METTL11B,KIFAP3	119872,42791
chr19:1479588-1479795	chr19	+	1479616	1479754	True	NM_138393,NM_152482	chr19,chr19	+,-	REEP6,C19orf25	11410,-388
chr2:108618051-108618648	chr2	+	108618216	108618630	True	NR_024439,NM_021815	chr2,chr2	-,+	LOC729121,SLC5A7	-175633,-15272
chr11:5444288-5445135	chr11	+	5444477	5444923	True	NM_001004757,NM_001005288	chr11,chr11	+,-	OR51Q1,OR51I1	-1195,17921
chr11:62690613-62691154	chr11	+	62690623	62691170	True	NR_037193,NM_000738	chr11,chr11	+,-	SLC3A2,CHRM1	-41503,-1611
chr9:32991217-32992163	chr9	+	32991246	32992182	True	NM_001195254,NR_036577,NM_001195252,NM_001195251,NM_001195250,NR_036579,NR_036578,NM_001195248,NM_001195249,NM_175069,NM_001539,NM_175073,NR_036576	chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,-,-,-,-,-,-,-,-,-,+,-,-	APTX,APTX,APTX,APTX,APTX,APTX,APTX,APTX,APTX,APTX,DNAJA1,APTX,APTX	9478,9507,9507,9507,9507,9442,9478,9507,9442,9507,33026,9507,9507
chr13:41325060-41326453	chr13	+	41325076	41326501	True	NM_005830,NM_014252	chr13,chr13	-,+	MRPS31,SLC25A15	18896,37045
chr10:91380980-91382448	chr10	+	91381121	91382152	True	NM_016195,NM_138316	chr10,chr10	+,-	KIF20B,PANK1	79214,21552
chr1:176432170-176434041	chr1	+	176432488	176434069	True	NM_021936,NM_020318,NM_022457	chr1,chr1,chr1	+,+,-	PAPPA2,PAPPA2,RFWD2	-233,-233,-256118
chr14:74034613-74035133	chr14	+	74034778	74034980	True	NM_203309,NM_006821	chr14,chr14	-,+	HEATR4,ACOT2	-9127,791
chr1:18955887-18956251	chr1	+	18955898	18955976	True	NM_001135254,NM_002584,NM_152232,NM_013945	chr1,chr1,chr1,chr1	+,+,-,+	PAX7,PAX7,TAS1R2,PAX7	1523,1523,230229,1523
chr14:103995318-103995524	chr14	+	103995324	103995418	True	NM_152307,NM_001823	chr14,chr14	+,-	TRMT61A,CKB	90,-6154
chr17:6558425-6558849	chr17	+	6558508	6558890	True	NM_016060,NM_001105520	chr17,chr17	-,+	MED31,C17orf100	-3554,-3500
chr8:42995497-42995712	chr8	+	42995500	42995710	True	NR_027669,NM_152419	chr8,chr8	-,+	RNF170,HGSNAT	-243634,41
chr5:3597934-3598554	chr5	+	3597991	3598517	True	NR_033898,NM_024337	chr5,chr5	-,+	LOC285577,IRX1	-61783,-1874
chr13:111601252-111601652	chr13	+	111601307	111601691	True	NM_017664,NM_001113511	chr13,chr13	-,+	ANKRD10,ARHGEF7	-33891,165932
chr6:39085050-39086521	chr6	+	39085089	39085896	True	NM_018322,NM_002062	chr6,chr6	-,+	C6orf64,GLP1R	-2224,-68596
chr11:75063911-75064714	chr11	+	75063949	75064763	True	NM_020251,NM_004041,NM_001005	chr11,chr11,chr11	-,-,+	ARRB1,ARRB1,RPS3	-1074,-1074,45798
chr19:40324488-40324735	chr19	+	40324493	40324755	True	NM_006484,NM_004714,NM_001143832,NM_006483	chr19,chr19,chr19,chr19	-,-,+,-	DYRK1B,DYRK1B,LEUTX,DYRK1B	136,136,-57310,136
chr7:4921612-4921927	chr7	+	4921614	4921964	True	NM_018059,NR_015449	chr7,chr7	-,+	RADIL,RNF216L	1421,91651
chr2:11504922-11505334	chr2	+	11504961	11505231	True	NM_004850,NM_014668	chr2,chr2	-,+	ROCK2,GREB1	-20250,169010
chr1:12958401-12959713	chr1	+	12958720	12959628	True	NM_001012276,NM_001039361	chr1,chr1	+,-	PRAMEF8,PRAMEF10	16821,-626
chr1:12958401-12959713	chr1	-	13407600	13408508	False	NM_001012276,NM_001098376	chr1,chr1	-,+	PRAMEF8,PRAMEF15	-16835,12667
chr1:12958401-12959713	chr1	-	13628397	13629305	False	NM_001012276,NM_001098376	chr1,chr1	-,+	PRAMEF8,PRAMEF15	-16847,12667
chr19:36238699-36239146	chr19	+	36239016	36239193	True	NM_144987,NM_001040425,NM_024660,NM_001039887,NM_144617,NM_172341,NM_019104	chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,+,-,+,+	U2AF1L4,U2AF1L4,IGFLR1,C19orf55,HSPB6,PSENEN,LIN37	-2680,-2680,-5665,9850,8788,-2574,318
chr2:102998096-102998452	chr2	+	102998095	102998436	True	NM_003855,NM_032718	chr2,chr2	+,-	IL18R1,MFSD9	-19056,354960
chrX:49118074-49119935	chrX	+	49118345	49119976	True	NM_001114377,NM_033215,NM_001184745,NM_014009	chrX,chrX,chrX,chrX	-,+,+,-	FOXP3,PPP1R3F,PPP1R3F,FOXP3	1364,6329,6329,1364
chr1:19815050-19815971	chr1	+	19815179	19815549	True	NM_001032363,NM_004930	chr1,chr1	+,-	C1orf151,CAPZB	107921,-3113
chr17:18965015-18965339	chr17	+	18965185	18965254	True	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	65527,-14849
chr17:18965015-18965339	chr17	-	18967419	18967488	False	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	63293,-17083
chr19:39807943-39809075	chr19	+	39807990	39809046	True	NM_172140,NM_020862	chr19,chr19	+,-	IL29,LRFN1	-21076,-2014
chr9:131464386-131464727	chr9	+	131464519	131464637	True	NM_013355,NM_032799	chr9,chr9	+,-	PKN3,ZDHHC12	164,21823
chr7:150945133-150945380	chr7	+	150945137	150945414	True	NR_030407,NM_001003801	chr7,chr7	+,-	MIR671,SMARCD3	-9681,385
chrX:19820336-19820948	chrX	+	19820532	19820912	True	NM_001173456,NM_001024666	chrX,chrX	+,-	PDHA1,SH3KBP1	-458572,-2615
chr6:150388323-150388718	chr6	+	150388355	150388675	True	NM_030949,NM_024518	chr6,chr6	+,-	PPP1R14C,ULBP3	75512,1577
chr7:135195001-135195220	chr7	+	135195098	135195182	True	NM_001190847,NM_001190850,NM_001190849,NM_001190848,NM_001008225,NM_015135,NM_013316	chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,+,-	CNOT4,CNOT4,CNOT4,CNOT4,CNOT4,NUP205,CNOT4	-223,-223,-223,-223,-223,47479,-223
chr4:110737937-110739879	chr4	+	110738203	110739524	True	NM_018983,NM_006583,NM_000204,NM_032993	chr4,chr4,chr4,chr4	+,+,-,+	GAR1,RRH,CFI,GAR1	-1588,9625,-14868,-1588
chr7:140784769-140785659	chr7	+	140785105	140785567	True	NM_053035,NM_001195278	chr7,chr7	-,+	MRPS33,LOC100131199	-70324,-11138
chr4:673863-674344	chr4	+	673863	674367	True	NM_007100,NM_002477,NR_033743,NM_032219	chr4,chr4,chr4,chr4	-,+,-,-	ATP5I,MYL5,ATP5I,MFSD7	-5736,-2204,-5736,8656
chr15:34630176-34630393	chr15	+	34630242	34630432	True	NM_133647,NM_001042496,NM_001042497,NM_001042494,NM_001042495,NM_018648,NM_175741	chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,-,-,-,-,+	SLC12A6,SLC12A6,SLC12A6,SLC12A6,SLC12A6,NOP10,C15orf55	-1197,-281,-1197,-281,23,4980,7633
chr4:86396684-86396966	chr4	+	86396710	86397012	True	NM_001025616,NM_014991	chr4,chr4	+,-	ARHGAP24,WDFY3	-477,-509166
chr4:52709811-52710367	chr4	+	52709852	52710382	True	NM_001040402,NM_015115,NM_001024611	chr4,chr4,chr4	+,+,-	DCUN1D4,DCUN1D4,LRRC66	-627,-627,173454
chr20:55902783-55903053	chr20	+	55903008	55903102	True	NM_198265,NM_012444,NR_036219	chr20,chr20,chr20	+,+,-	SPO11,SPO11,MIR4325	1728,1728,-6361
chr2:86359495-86360877	chr2	+	86359621	86360800	True	NM_015425,NR_004378	chr2,chr2	-,+	POLR1A,SNORD94	-26343,2192
chr1:176434041-176434945	chr1	+	176434040	176434614	True	NM_021936,NM_020318,NM_022457	chr1,chr1,chr1	+,+,-	PAPPA2,PAPPA2,RFWD2	-1791,-1791,-257670
chr20:1293558-1293820	chr20	+	1293561	1293717	True	NM_014723,NM_015685	chr20,chr20	+,-	SNPH,SDCBP2	-46652,650
chr6:39082142-39082510	chr6	+	39082173	39082539	True	NM_018322,NM_002062	chr6,chr6	-,+	C6orf64,GLP1R	376,-65668
chr22:36423580-36423956	chr22	+	36423581	36423925	True	NM_001082579,NM_001082578,NM_001136540	chr22,chr22,chr22	-,-,+	RBFOX2,RBFOX2,APOL1	710,710,225191
chr6:125328550-125329122	chr6	+	125328801	125328935	True	NR_026876,NM_152553	chr6,chr6	-,+	STL,RNF217	-44628,-24345
chr14:20807619-20808700	chr14	+	20808113	20808752	True	NM_001042618,NM_005484,NR_002312,NM_182849,NM_021178	chr14,chr14,chr14,chr14,chr14	+,+,-,-,-	PARP2,PARP2,RPPH1,CCNB1IP1,CCNB1IP1	3020,3020,2874,-6656,-6656
chr1:204815815-204817020	chr1	+	204816123	204817070	True	NM_201630,NM_015090	chr1,chr1	-,+	LRRN2,NFASC	-161526,-18392
chr16:579573-579916	chr16	+	579580	579896	True	NM_005632,NR_024121	chr16,chr16	+,-	SOLH,NCRNA00235	-1775,-2173
chr19:36907800-36908631	chr19	+	36908097	36908629	True	NM_133466,NR_033748	chr19,chr19	-,+	ZFP82,LOC644189	971,3809
chr5:179499873-179500169	chr5	+	179499952	179500186	True	NM_003900,NM_018434	chr5,chr5	+,-	SQSTM1,RNF130	-252171,-843
chr6:10888975-10889944	chr6	+	10888974	10889768	True	NM_004752,NM_001040274	chr6,chr6	-,+	GCM2,SYCP2L	-6876,-1962
chr12:63314395-63314795	chr12	+	63314469	63314651	True	NR_029661,NM_020700	chr12,chr12	+,-	MIRLET7I,PPM1H	-317054,14074
chrX:40123137-40123648	chrX	+	40123189	40123669	True	NM_001123384,NM_005765	chrX,chrX	-,+	BCOR,ATP6AP2	-86607,316546
chr6:26458119-26458399	chr6	+	26458120	26458350	True	NM_001197233,NM_001197234,NM_078476,NM_003543,NM_007049	chr6,chr6,chr6,chr6,chr6	+,+,+,-,+	BTN2A1,BTN2A1,BTN2A1,HIST1H4H,BTN2A1	7,-18,-18,-172393,-18
chrX:47422410-47422632	chrX	+	47422421	47422677	True	NM_001654,NM_006950	chrX,chrX	+,-	ARAF,SYN1	-1956,56629
chr19:54368374-54368668	chr19	+	54368493	54368565	True	NM_138373,NM_144687,NM_001020821,NM_001020820,NM_001020818,NM_001020819	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+	MYADM,NLRP12,MYADM,MYADM,MYADM,MYADM	2571,-40845,4094,1045,4215,2571
chr16:67425208-67426664	chr16	+	67425269	67426633	True	NM_016140,NM_015964,NM_000196	chr16,chr16,chr16	-,-,+	TPPP3,TPPP3,HSD11B2	838,838,38402
chr4:9608797-9609279	chr4	+	9608825	9608967	True	NR_031688,NM_001040448	chr4,chr4	-,+	MIR548I2,DEFB131	-50888,-162618
chr6:28458298-28459110	chr6	+	28458406	28458837	True	NM_182701,NM_001509	chr6,chr6	-,+	GPX6,GPX5	24784,34951
chr14:58861678-58862597	chr14	+	58861827	58862477	True	NM_012460,NM_207377	chr14,chr14	-,+	TIMM9,TOMM20L	31805,166
chr10:12389663-12390100	chr10	+	12389702	12390076	True	NM_014142,NM_153498,NM_020397	chr10,chr10,chr10	-,+,+	NUDT5,CAMK1D,CAMK1D	-151559,1506,1506
chr13:37004615-37004855	chr13	+	37004634	37004898	True	NM_003914,NM_001142294,NM_001111046,NM_001111047,NM_001111045	chr13,chr13,chr13,chr13,chr13	+,-,+,+,+	CCNA1,SPG20,CCNA1,CCNA1,CCNA1	1510,-60317,1068,1068,1510
chr4:1167407-1167900	chr4	+	1167417	1167712	True	NR_033339,NM_012445,NM_001128325	chr4,chr4,chr4	+,-,-	C4orf42,SPON2,SPON2	75515,-760,-418
chr14:70882878-70883540	chr14	+	70883058	70883582	True	NM_001202548,NM_001202549,NM_001202547,NM_003813,NM_018373	chr14,chr14,chr14,chr14,chr14	-,-,-,+,-	SYNJ2BP-COX16,SYNJ2BP-COX16,SYNJ2BP-COX16,ADAM21,SYNJ2BP	275,275,275,40634,275
chr9:90534410-90534814	chr9	+	90534530	90534856	True	NM_001145124,NM_001039803	chr9,chr9	+,-	FAM75C1,CDK20	-1704,54889
chr9:90534410-90534814	chr9	-	84676559	84676621	False	NM_005077,NM_001001670	chr9,chr9	-,+	TLE1,FAM75D1	-372963,-72923
chr9:90534410-90534814	chr9	+	95646811	95646861	False	NM_001083536,NM_001007101,NM_031486	chr9,chr9,chr9	+,-,-	FGD3,ZNF484,ZNF484	62739,-6541,-6521
chr9:90534410-90534814	chr9	-	90747915	90748241	False	NM_001145124,NM_001166137	chr9,chr9	+,-	FAM75C1,FAM75C2	-215089,1709
chr4:141443013-141444362	chr4	+	141443319	141444275	True	NM_021833,NM_153702	chr4,chr4	-,+	UCP1,ELMOD2	45734,1036
chr7:112119371-112120152	chr7	+	112119581	112120154	True	NM_182597,NM_014705,NM_001134468	chr7,chr7,chr7	+,-,+	C7orf53,DOCK4,C7orf53	911,-273119,753
chr7:71880444-71881427	chr7	+	71880444	71881378	True	NR_001588,NM_031468	chr7,chr7	+,-	SBDSP1,CALN1	418573,-3084
chr4:46907419-46907885	chr4	+	46907458	46907813	True	NM_130902,NM_000812	chr4,chr4	-,+	COX7B2,GABRB1	3489,125481
chr13:113634043-113634395	chr13	+	113634167	113634389	True	NM_024979,NR_034002	chr13,chr13	+,-	MCF2L,MCF2L-AS1	-563,-11215
chr16:19421254-19422001	chr16	+	19421278	19421934	True	NM_001105249,NM_001105248,NM_016641	chr16,chr16,chr16	+,+,-	TMC5,TMC5,GDE1	122,122,111566
chr3:197678382-197678727	chr3	+	197678511	197678577	True	NR_026787,NR_026786,NM_001134435,NM_032263,NM_000996,NM_001136049,NM_033029	chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,-,-,+,+,+	LMLN,LMLN,IQCG,IQCG,RPL35A,LMLN,LMLN	8493,8493,-1715,8365,-1517,8493,8493
chr4:188916873-188917123	chr4	+	188916901	188917163	True	NM_173553,NM_174900	chr4,chr4	-,+	TRIML2,ZFP42	109295,-27
chr22:24203325-24204327	chr22	+	24203499	24204375	True	NM_198440,NM_001024939,NM_001024938,NM_030807	chr22,chr22,chr22,chr22	-,+,+,+	DERL3,SLC2A11,SLC2A11,SLC2A11	-22300,-3509,-4491,-4491
chr4:110690663-110691634	chr4	+	110690774	110691396	True	NM_018983,NM_000204	chr4,chr4	+,-	GAR1,CFI	45269,31989
chr22:35855824-35857572	chr22	+	35856690	35857387	True	NM_005368,NM_006739	chr22,chr22	-,+	MB,MCM5	156047,-60625
chr19:51303866-51304133	chr19	+	51304098	51304176	True	NR_003067,NR_003069,NR_003068,NM_033068,NM_199249,NM_199250	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,+,-,-	SNORD88A,SNORD88C,SNORD88B,ACPT,C19orf48,C19orf48	-1306,1552,-1716,-10477,3848,3846
chr1:38471570-38471837	chr1	+	38471575	38471827	True	NM_004468,NM_016037	chr1,chr1	-,+	FHL3,UTP11L	-341,6556
chr8:144372073-144372340	chr8	+	144372103	144372184	True	NM_030895,NM_052963	chr8,chr8	+,-	ZNF696,TOP1MT	1374,44923
chr1:1110350-1110845	chr1	+	1110562	1110866	True	NR_029834,NM_153254,NR_029957,NM_004195,NM_001130045,NR_029639	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,-,+,+	MIR200A,TTLL10,MIR429,TNFRSF18,TTLL10,MIR200B	-7377,4210,-6235,31273,-1334,-8136
chr2:106813626-106814552	chr2	+	106814263	106814535	True	NM_025076,NM_032411	chr2,chr2	-,+	UXS1,C2orf40	-3468,-132201
chr15:74757564-74758487	chr15	+	74757664	74757985	True	NM_006465,NM_032907,NM_201265	chr15,chr15,chr15	+,-,-	ARID3B,UBL7,UBL7	75562,-4154,-4135
chr19:16047169-16047789	chr19	+	16047363	16047735	True	NM_001004465,NM_021187,NM_001128932	chr19,chr19,chr19	+,-,-	OR10H4,CYP4F11,CYP4F11	12082,-1687,-1687
chr10:81318842-81319138	chr10	+	81318849	81319137	True	NM_001099692,NM_001098668	chr10,chr10	+,-	EIF5AL1,SFTPA2	-46543,1076
chr10:81318842-81319138	chr10	-	81371907	81371979	False	NM_005411,NM_001093770,NM_001098668,NM_001164644,NM_001164645,NM_001164646,NM_001164647	chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,-,+,+,+,+	SFTPA1,SFTPA1,SFTPA2,SFTPA1,SFTPA1,SFTPA1,SFTPA1	-1263,-1263,-51744,-1263,-1263,-1263,-1263
chr2:119981785-119982049	chr2	+	119981869	119982041	True	NM_182528,NM_001008410,NM_018234,NM_182915	chr2,chr2,chr2,chr2	-,+,+,+	C1QL2,STEAP3,STEAP3,STEAP3	-65398,-536,-536,-536
chr6:160679828-160680711	chr6	+	160680024	160680593	True	NM_003058,NM_021977	chr6,chr6	-,+	SLC22A2,SLC22A3	-61,88831
chr3:182510317-182510982	chr3	+	182510427	182510911	True	NM_014616,NM_020640	chr3,chr3	+,-	ATP11B,DCUN1D1	379,187465
chr19:14169260-14169947	chr19	+	14169286	14169962	True	NR_024282,NM_001145028	chr19,chr19	+,-	LOC113230,PALM3	13858,59
chr16:21696466-21696701	chr16	+	21696486	21696696	True	NM_144672,NM_001161683,NM_005849	chr16,chr16,chr16	+,+,-	OTOA,OTOA,IGSF6	-6702,-787,-32514
chr11:118867324-118868122	chr11	+	118867684	118868140	True	NM_198489,NR_003040	chr11,chr11	+,-	CCDC84,RPL23AP64	711,6213
chr9:129374398-129374774	chr9	+	129374398	129374762	True	NM_001174146,NM_001174147,NM_002316,NM_012098	chr9,chr9,chr9,chr9	+,+,+,-	LMX1B,LMX1B,LMX1B,ANGPTL2	1959,1959,1959,510332
chr11:71167763-71168665	chr11	+	71167819	71168637	True	NM_018161,NM_001360,NM_001163817	chr11,chr11,chr11	+,-,-	NADSYN1,DHCR7,DHCR7	-3654,-8342,-8342
chr18:76822907-76824851	chr18	+	76823053	76824714	True	NM_198531,NM_001146343	chr18,chr18	+,-	ATP9B,PQLC1	4682,886996
chr8:145633436-145633790	chr8	+	145633509	145633829	True	NR_031600,NM_130849,NM_017767,NM_174922,NM_013291	chr8,chr8,chr8,chr8,chr8	-,-,-,+,-	MIR1234,SLC39A4,SLC39A4,ADCK5,CPSF1	-7950,8494,8138,-35829,954
chrX:49354527-49355537	chrX	+	49354535	49354635	True	NM_001040663,NM_003785,NM_001127212,NM_001468	chrX,chrX,chrX,chrX	+,-,+,+	GAGE1,PAGE1,GAGE2A,GAGE1	8980,106011,-468,8980
chrX:49354527-49355537	chrX	+	49217097	49217152	False	NM_014009,NM_001098407,NM_001098405,NM_012196,NM_021123,NM_001474,NM_001475,NM_001127200,NM_001477,NM_001127212,NM_001472	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,+,+,+,+,+,+	FOXP3,GAGE2D,GAGE12F,GAGE8,GAGE7,GAGE4,GAGE5,GAGE2E,GAGE12I,GAGE2A,GAGE2C	-95809,8985,618,-490,-471,-500,-492,-490,-472,-515,-501
chr2:242292452-242294181	chr2	+	242292628	242293874	True	NM_005336,NM_014808	chr2,chr2	-,+	HDLBP,FARP2	-37374,1789
chr19:2094338-2094889	chr19	+	2094346	2094841	True	NM_130807,NM_001031735,NM_001039846	chr19,chr19,chr19	-,+,+	MOBKL2A,IZUMO4,IZUMO4	1485,2026,2026
chr1:201979831-201981830	chr1	+	201979924	201981718	True	NM_012134,NM_004433,NM_001114309	chr1,chr1,chr1	-,+,+	LMOD1,ELF3,ELF3	-64208,-285,-285
chr2:63816193-63817617	chr2	+	63816432	63817658	True	NM_015910,NM_001199111,NM_001199112,NM_005917	chr2,chr2,chr2,chr2	-,+,+,+	WDPCP,MDH1,MDH1,MDH1	-565,-198,-198,-740
chr9:79633416-79633692	chr9	+	79633431	79633673	True	NM_015225,NM_001013735	chr9,chr9	-,+	PRUNE2,FOXB2	-112428,897
chr1:86860021-86860682	chr1	+	86860227	86860360	True	NM_001184765,NM_001184766,NM_006536,NM_020729,NM_001007022	chr1,chr1,chr1,chr1,chr1	-,-,+,-,-	ODF2L,ODF2L,CLCA2,ODF2L,ODF2L	1720,1720,29408,1720,1720
chr1:32540257-32540604	chr1	+	32540265	32540611	True	NM_018056,NM_080391	chr1,chr1	+,-	TMEM39B,PTP4A2	-1815,-136277
chr6:35694575-35695265	chr6	+	35694687	35695111	True	NR_027117,NM_001145775,NM_145028	chr6,chr6,chr6	-,-,+	LOC285847,FKBP5,C6orf81	9663,1299,9747
chr5:96006493-96008133	chr5	+	96006715	96007925	True	NM_001190442,NM_001042440,NM_016442	chr5,chr5,chr5	+,+,-	CAST,CAST,ERAP1	-9032,-8866,136028
chr4:6267387-6268030	chr4	+	6267478	6267848	True	NM_006005,NM_144720,NM_001145853	chr4,chr4,chr4	+,-,+	WFS1,JAKMIP1,WFS1	3728,-65160,3728
chr16:31192393-31192893	chr16	+	31192636	31192928	True	NM_004960,NM_001170937,NM_013258,NM_001170634,NR_028388	chr16,chr16,chr16,chr16,chr16	+,+,-,+,+	FUS,FUS,PYCARD,FUS,FUS	-1256,-1256,21219,-1256,-1256
chr20:35200633-35200958	chr20	+	35200644	35200952	True	NM_021809,NM_001199535,NM_001199513,NM_001199514,NM_001199515,NM_032214	chr20,chr20,chr20,chr20,chr20,chr20	+,+,+,+,+,-	TGIF2,TGIF2-C20ORF24,TGIF2,TGIF2,TGIF2,SLA2	1057,2004,923,923,2004,73656
chr22:30117299-30117922	chr22	+	30117538	30117756	True	NM_001003692,NM_182527	chr22,chr22	-,+	ZMAT5,CABP7	45263,-1245
chr18:21719409-21719980	chr18	+	21719472	21719872	True	NM_012189,NM_138643,NM_018030,NM_138644,NM_153770,NM_153769,NM_153768	chr18,chr18,chr18,chr18,chr18,chr18,chr18	+,+,-,+,+,+,+	CABYR,CABYR,OSBPL1A,CABYR,CABYR,CABYR,CABYR	-568,-568,132374,-75,-568,-568,-568
chr17:46691217-46691541	chr17	+	46691266	46691566	True	NM_024016,NM_004502,NM_018952,NR_033205	chr17,chr17,chr17,chr17	-,-,-,+	HOXB8,HOXB7,HOXB6,LOC404266	785,-2883,-8932,-18002
chr2:70420066-70420381	chr2	+	70420178	70420286	True	NM_016297,NM_017880	chr2,chr2	+,-	PCYOX1,C2orf42	64944,-2027
chrX:40035053-40035378	chrX	+	40035142	40035406	True	NM_001123384,NM_005765,NM_001123383	chrX,chrX,chrX	-,+,-	BCOR,ATP6AP2,BCOR	1226,404809,1226
chr3:151485071-151485691	chr3	+	151485236	151485739	True	NR_026915,NM_178822	chr3,chr3	+,-	LOC201651,IGSF10	2504,-308739
chr5:134074682-134075055	chr5	+	134074863	134075067	True	NM_001745,NM_016103	chr5,chr5	+,-	CAMLG,SAR1B	-744,-106330
chr7:30718838-30719225	chr7	+	30718862	30719222	True	NM_001202483,NM_001202482,NM_001199219,NM_001883	chr7,chr7,chr7,chr7	-,-,+,-	CRHR2,CRHR2,INMT,CRHR2	2971,2971,72528,2971
chr1:161628274-161629490	chr1	+	161628291	161629331	True	NM_004001,NM_001002273,NM_001190828,NM_001002274,NM_001002275,NR_002595	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-	FCGR2B,FCGR2B,FCGR2B,FCGR2B,FCGR2B,RPL31P11	3573,3573,3573,3573,3573,25765
chr1:161628274-161629490	chr1	+	161546451	161547491	False	NM_201563,NM_001127596	chr1,chr1	+,-	FCGR2C,FCGR3A	3637,-26038
chr4:88926348-88927418	chr4	+	88926448	88926994	True	NM_000297,NM_004827	chr4,chr4	+,-	PKD2,ABCG2	1804,153067
chr1:27562541-27563125	chr1	+	27562580	27563168	True	NM_015023,NM_003047	chr1,chr1	+,-	WDTC1,SLC9A1	-1624,-81129
chr2:27590921-27592773	chr2	+	27591292	27592630	True	NM_015636,NM_001034116,NM_014748,NM_172195	chr2,chr2,chr2,chr2	-,-,+,-	EIF2B4,EIF2B4,SNX17,EIF2B4	744,744,758,339
chrX:34674441-34674879	chrX	+	34674440	34674735	True	NM_152631,NM_031442	chrX,chrX	+,-	FAM47B,TMEM47	286177,720
chr19:35633667-35634100	chr19	+	35633921	35634003	True	NM_005031,NM_022006,NM_139284,NM_021902	chr19,chr19,chr19,chr19	+,+,-,+	FXYD1,FXYD7,LGI4,FXYD1	-3580,150,-7743,-4240
chr11:60610163-60610525	chr11	+	60610259	60610537	True	NM_004778,NM_024098	chr11,chr11	-,+	GPR44,CCDC86	12957,-881
chr2:31459841-31461359	chr2	+	31459897	31461296	True	NM_014600,NM_001145122	chr2,chr2	+,-	EHD3,CAPN14	-3068,-19486
chr14:97400145-97400914	chr14	+	97400277	97400867	True	NM_003384,NM_018036	chr14,chr14	+,-	VRK1,ATG2B	-136644,-570599
chr12:45269060-45269508	chr12	+	45269077	45269359	True	NM_001145108,NM_001145109,NM_001025356,NM_006159,NM_001145107	chr12,chr12,chr12,chr12,chr12	-,-,+,-,-	NELL2,NELL2,ANO6,NELL2,NELL2	938,135,340410,938,1324
chr1:60392580-60393335	chr1	+	60392620	60393246	True	NM_000775,NM_015888	chr1,chr1	-,+	CYP2J2,HOOK1	-197,-112138
chr20:21108947-21110123	chr20	+	21109123	21109878	True	NM_033176,NM_001163023,NM_001163022,NM_018474	chr20,chr20,chr20,chr20	-,+,+,+	NKX2-4,PLK1S1,PLK1S1,PLK1S1	268220,-2550,-2550,-2550
chr1:152193160-152193466	chr1	+	152193162	152193496	True	NM_001009931,NM_178438	chr1,chr1	-,+	HRNR,LCE5A	3223,289823
chr19:46364368-46364718	chr19	+	46364494	46364730	True	NM_004819,NM_004497	chr19,chr19	-,+	SYMPK,FOXA3	1868,2787
chr22:31552151-31553682	chr22	+	31552271	31553425	True	NR_024209,NR_037496,NM_001135825,NR_024211,NR_024210,NR_024212,NM_152267	chr22,chr22,chr22,chr22,chr22,chr22,chr22	+,-,+,+,+,+,+	RNF185,MIR3928,RNF185,RNF185,RNF185,RNF185,RNF185	2712,2738,2712,2712,2712,2712,2712
chr21:30443807-30444239	chr21	+	30444001	30444263	True	NM_006585,NM_020152	chr21,chr21	-,+	CCT8,C21orf7	1797,8609
chr1:40363088-40363579	chr1	+	40363134	40363604	True	NM_001033081,NM_001033082,NM_005376,NM_001136493	chr1,chr1,chr1,chr1	-,-,-,+	MYCL1,MYCL1,MYCL1,MFSD2A	4133,4133,4133,57179
chr6:26370756-26372200	chr6	+	26370894	26372253	True	NM_003543,NM_007047,NM_001197248,NM_001197249,NM_001197246,NM_001197247	chr6,chr6,chr6,chr6,chr6,chr6	-,+,+,+,+,+	HIST1H4H,BTN3A2,BTN3A2,BTN3A2,BTN3A2,BTN3A2	-85167,-5547,-5475,-5547,-2539,-5547
chr22:39074238-39075530	chr22	+	39074642	39075421	True	NM_014876,NM_020243	chr22,chr22	-,+	JOSD1,TOMM22	21088,2532
chr19:50879209-50879605	chr19	+	50879426	50879638	True	NM_007121,NM_002691,NM_004851	chr19,chr19,chr19	+,+,-	NR1H2,POLD1,NAPSA	46,7954,-10495
chr2:55276693-55276916	chr2	+	55276759	55276907	True	NM_207521,NM_207520,NM_001135592,NM_153828,NM_020532	chr2,chr2,chr2,chr2,chr2	-,-,+,-,-	RTN4,RTN4,RPS27A,RTN4,RTN4	-433,877,182131,877,877
chr1:205474659-205474937	chr1	+	205474675	205474793	True	NM_212503,NM_002596,NR_027086,NM_212502	chr1,chr1,chr1,chr1	+,+,-,+	CDK18,CDK18,LOC284578,CDK18	-1042,-1042,51020,-1042
chr5:137802813-137803115	chr5	+	137802828	137803110	True	NM_004730,NM_001964	chr5,chr5	-,+	ETF1,EGR1	75872,-1698
chr14:90084976-90085453	chr14	+	90084980	90085353	True	NR_024620,NM_001085471	chr14,chr14	+,-	PRO1768,FOXN3	-42480,191
chr8:127795097-127795325	chr8	+	127795110	127795384	True	NM_001159542,NM_174911	chr8,chr8	+,-	POU5F1B,FAM84B	632472,-224399
chr1:27998190-27998664	chr1	+	27998221	27998647	True	NM_022872,NM_002038,NM_022873,NM_001143912	chr1,chr1,chr1,chr1	-,-,-,+	IFI6,IFI6,IFI6,FAM76A	127,127,127,53842
chr11:61892279-61893961	chr11	+	61892354	61893558	True	NM_001040694,NM_002032,NM_020238	chr11,chr11,chr11	+,-,+	INCENP,FTH1,INCENP	-960,-157222,-960
chr21:36420784-36422006	chr21	+	36420860	36422048	True	NR_024351,NR_026812,NM_001754	chr21,chr21,chr21	+,-,-	NCRNA00160,C21orf96,RUNX1	-324806,-9137,-213
chrX:119027159-119028671	chrX	+	119027350	119028536	True	NM_178813,NM_006978,NM_001008535,NM_001008534	chrX,chrX,chrX,chrX	+,-,+,+	AKAP14,RNF113A,AKAP14,AKAP14	1399,-21559,1399,1399
chr13:79178604-79179603	chr13	+	79178998	79179624	True	NM_006237,NM_144595	chr13,chr13	-,+	POU4F1,SLAIN1	-1303,-863755
chr12:128078769-128079498	chr12	+	128078773	128079505	True	NR_033970,NR_033987	chr12,chr12	-,+	LOC440117,FLJ37505	-719537,286656
chr3:42846894-42847114	chr3	+	42846910	42847088	True	NM_001296,NM_001099669,NM_001099668,NM_014056	chr3,chr3,chr3,chr3	+,-,-,-	CCBP2,HIGD1A,HIGD1A,HIGD1A	3875,-883,-976,-883
chr11:104034355-104034646	chr11	+	104034518	104034694	True	NM_033135,NM_025208,NM_001001711	chr11,chr11,chr11	-,-,+	PDGFD,PDGFD,DDI1	383,383,-127261
chr16:2301114-2301328	chr16	+	2301141	2301249	True	NM_001374,NM_001178029,NM_001919	chr16,chr16,chr16	+,-,-	DNASE1L2,ECI1,ECI1	-14724,403,403
chr5:34208645-34209119	chr5	+	34208791	34208852	True	NM_016568,NR_037951	chr5,chr5	+,-	RXFP3,C1QTNF3-AMACR	-272359,-84158
chr16:3167088-3168008	chr16	+	3167098	3167804	True	NM_001042428,NR_024167,NR_024166,NM_003456	chr16,chr16,chr16,chr16	+,-,-,+	ZNF205,MGC3771,MGC3771,ZNF205	-4598,-1499,-1499,-4598
chr10:43132475-43133201	chr10	+	43132500	43133046	True	NM_014753,NM_006955	chr10,chr10	+,-	BMS1,ZNF33B	144907,1002
chr19:3803042-3803268	chr19	+	3803094	3803222	True	NM_172251,NM_002378	chr19,chr19	+,-	MRPL54,MATK	-40480,-1284
chr22:30233344-30233607	chr22	+	30233438	30233516	True	NM_021090,NM_032204	chr22,chr22	+,-	MTMR3,ASCC2	45641,790
chr7:76681188-76681969	chr7	+	76681815	76682017	True	NM_006682,NR_028058	chr7,chr7	-,+	FGL2,LOC100132832	147183,-13069
chr7:76681188-76681969	chr7	+	76162871	76162933	False	NR_029411,NR_003262	chr7,chr7	+,-	LOC100133091,FDPSL2A	15724,-58554
chr9:116059105-116059674	chr9	+	116059153	116059719	True	NM_145051,NM_004697	chr9,chr9	-,+	RNF183,PRPF4	1651,-21237
chrY:6271673-6272282	chrY	+	6271733	6272251	True	NR_001538,NR_001536	chrY,chrY	+,-	TTTY1,TTTY2	-13315,24292
chrY:6271673-6272282	chrY	-	9598118	9598636	False	NR_001538,NR_003590	chrY,chrY	-,+	TTTY1,TTTY2B	13315,-24282
chr2:220070892-220071456	chr2	+	220070894	220071272	True	NM_138802,NM_005689	chr2,chr2	+,-	ZFAND2B,ABCB6	265,12490
chr1:41157167-41157749	chr1	+	41157279	41157696	True	NR_024567,NM_014223,NM_001142589,NM_001142588,NM_001142587,NM_001142590	chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,+,+,+	LOC100130557,NFYC,NFYC,NFYC,NFYC,NFYC	287,-88,-88,-88,-88,-17
chr6:49519260-49520802	chr6	+	49519299	49520491	True	NM_001145652,NM_000324	chr6,chr6	+,-	C6orf141,RHAG	-1237,84146
chr3:184099692-184100295	chr3	+	184099730	184100272	True	NM_001177598,NM_003741,NM_000460,NM_001177597	chr3,chr3,chr3,chr3	-,+,-,-	THPO,CHRD,THPO,THPO	-3798,-1920,-3798,-3798
chr19:56461380-56461583	chr19	+	56461411	56461506	True	NM_176810,NM_176811	chr19,chr19	-,+	NLRP13,NLRP8	-17709,-2267
chr7:156332820-156334105	chr7	+	156332945	156334149	True	NR_026865,NR_024119	chr7,chr7	-,+	C7orf13,NCRNA00244	99249,182
chr2:34173711-34175569	chr2	+	34173731	34175090	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-434847,-220447
chr11:101981058-101981279	chr11	+	101981130	101981314	True	NM_001195045,NM_001195044,NM_001130145,NM_006106,NM_178127	chr11,chr11,chr11,chr11,chr11	+,+,+,+,-	YAP1,YAP1,YAP1,YAP1,ANGPTL5	1856,-1,-1,-1,-193877
chr12:93396522-93397169	chr12	+	93396562	93396870	True	NM_001004330,NM_003566	chr12,chr12	+,-	PLEKHG7,EEA1	-266349,-73455
chr19:51521282-51521692	chr19	+	51521639	51521699	True	NM_012315,NM_002776,NM_001136032,NM_145888,NM_001077500,NM_001167605,NM_006853,NM_144947,NM_014441	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,-,+	KLK9,KLK10,KLK11,KLK10,KLK10,KLK11,KLK11,KLK11,SIGLEC9	-8749,1633,8223,1305,1782,9641,9641,9236,106437
chr11:43716161-43716811	chr11	+	43716263	43716811	True	NR_033868,NM_016142	chr11,chr11	-,+	LOC399881,HSD17B12	-425344,-14189
chr17:33445852-33446288	chr17	+	33446084	33446226	True	NM_002878,NR_037711,NR_037712,NR_037714,NM_133629,NM_017559,NM_001142571	chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,+,-	RAD51L3,RAD51L3,RAD51L3,RAD51L3-RFFL,RAD51L3,FNDC8,RAD51L3	712,712,712,2365,712,2404,712
chr9:89627676-89627897	chr9	+	89627739	89627921	True	NR_027471,NM_001001709	chr9,chr9	-,+	LOC440173,C9orf170	29170,135637
chr8:110344566-110345948	chr8	+	110344648	110345636	True	NM_001193557,NR_036472,NM_020189,NR_036471,NM_001128211,NM_032869	chr8,chr8,chr8,chr8,chr8,chr8	+,+,+,+,-,-	ENY2,ENY2,ENY2,ENY2,NUDCD1,NUDCD1	915,915,915,915,-2486,767
chr14:68166198-68167152	chr14	+	68166532	68167152	True	NM_016026,NM_152443	chr14,chr14	-,+	RDH11,RDH12	-4022,1450
chr16:3075970-3076687	chr16	+	3075974	3076592	True	NM_001142350,NM_024339,NM_017885,NM_001103175,NM_001002017,NM_001002018,NM_021195,NM_016639	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,-,-,-,-,-,+	THOC6,THOC6,HCFC1R1,CCDC64B,HCFC1R1,HCFC1R1,CLDN6,TNFRSF12A	-1993,-1993,-1687,9000,-1687,-1687,-7786,-5712
chr5:7866369-7867436	chr5	+	7866465	7867425	True	NM_002454,NM_024010,NR_036553,NM_024091	chr5,chr5,chr5,chr5	+,+,-,-	MTRR,MTRR,FASTKD3,FASTKD3	1791,1791,1779,1779
chr4:125634406-125634773	chr4	+	125634423	125634815	True	NM_020337,NM_024582,NM_001167882	chr4,chr4,chr4	-,+,-	ANKRD50,FAT4,ANKRD50	-536,602751,-536
chr5:149490832-149491496	chr5	+	149490847	149491504	True	NM_005211,NM_001804	chr5,chr5	-,+	CSF1R,CDX1	1488,54839
chr22:39352350-39353715	chr22	+	39352493	39353669	True	NM_014292,NM_001193289,NM_145699	chr22,chr22,chr22	-,+,+	CBX6,APOBEC3A,APOBEC3A	-84235,-83,-83
chr19:18902566-18903354	chr19	+	18902642	18903014	True	NM_000095,NM_002911	chr19,chr19	-,+	COMP,UPF1	-528,39729
chr9:91001784-91002698	chr9	+	91002078	91002578	True	NM_006717,NM_001166137	chr9,chr9	+,-	SPIN1,FAM75C2	718,-252178
chr20:53096497-53098001	chr20	+	53096502	53097450	True	NM_018431,NM_001128915	chr20,chr20	+,-	DOK5,CYP24A1	-4287,-305986
chrX:96137341-96137675	chrX	+	96137516	96137600	True	NR_003539,NM_013347	chrX,chrX	-,+	LOC643486,RPA4	-544615,1306
chr8:90770280-90770565	chr8	+	90770316	90770614	True	NM_002485,NM_003821	chr8,chr8	-,+	NBN,RIPK2	226335,-392
chr1:207676246-207677201	chr1	+	207676289	207677226	True	NR_029832,NM_000651,NM_000573	chr1,chr1,chr1	-,+,+	MIR29C,CR1,CR1	298110,-6867,-6867
chr17:63134697-63135394	chr17	+	63134721	63135040	True	NM_006572,NM_003835,NM_001165933,NM_001081955	chr17,chr17,chr17,chr17	-,+,+,+	GNA13,RGS9,RGS9,RGS9	-81801,-1316,-1316,-1316
chr19:1407274-1407519	chr19	+	1407275	1407507	True	NM_138924,NM_018959,NM_170711,NM_000156	chr19,chr19,chr19,chr19	-,+,+,-	GAMT,DAZAP1,DAZAP1,GAMT	-5723,76,76,-5723
chr12:58018383-58018660	chr12	+	58018434	58018702	True	NM_001478,NM_133489	chr12,chr12	-,+	B4GALNT1,SLC26A10	8333,-4792
chr19:13874266-13875309	chr19	+	13874784	13875310	True	NM_014047,NR_036515,NM_001031727,NM_032285	chr19,chr19,chr19,chr19	+,-,+,+	C19orf53,LOC284454,MRI1,MRI1	9946,71843,26,26
chr21:37915352-37916367	chr21	+	37915675	37916363	True	NM_009586,NM_001146078	chr21,chr21	+,-	SIM2,CLDN14	155627,-777
chr1:17306028-17306589	chr1	+	17306354	17306420	True	NM_014675,NM_001135248,NM_002403,NM_017459,NM_001135247	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	CROCC,MFAP2,MFAP2,MFAP2,MFAP2	-57960,803,803,1711,1711
chr1:2563433-2564009	chr1	+	2563831	2563945	True	NM_033467,NM_152371	chr1,chr1	-,+	MMEL1,C1orf93	586,-45700
chr12:6232339-6233715	chr12	+	6232345	6233738	True	NM_001769,NM_000552	chr12,chr12	+,-	CD9,VWF	75743,148
chr4:1794532-1794828	chr4	+	1794598	1794764	True	NM_012318,NM_000142,NM_001163213,NM_022965	chr4,chr4,chr4,chr4	-,+,+,+	LETM1,FGFR3,FGFR3,FGFR3	63260,274,274,274
chr14:24910135-24911373	chr14	+	24910306	24911296	True	NM_015299,NM_020195	chr14,chr14	+,-	KHNYN,SDR39U1	-11216,761
chr3:14170928-14171130	chr3	+	14171024	14171172	True	NM_144636,NM_001098502,NM_024334	chr3,chr3,chr3	-,-,+	CHCHD4,CHCHD4,TMEM43	-4653,-4653,-4636
chr7:55640321-55640596	chr7	+	55640376	55640520	True	NM_018697,NM_030796	chr7,chr7	+,-	LANCL2,VOPP1	-207286,-176
chr17:79670802-79671144	chr17	+	79670916	79671176	True	NM_001040025,NM_002949,NM_012140	chr17,chr17,chr17	-,+,+	ARL16,MRPL12,SLC25A10	-19962,-567,8194
chr1:111889708-111890591	chr1	+	111889778	111890595	True	NR_029429,NM_181643	chr1,chr1	-,+	PGCP1,C1orf88	41929,-634
chr19:51714608-51714968	chr19	+	51714622	51715012	True	NM_001177608,NM_145232	chr19,chr19	+,-	CD33,CTU1	13322,-102975
chrX:21858201-21859256	chrX	+	21858302	21859144	True	NM_015884,NM_014332	chrX,chrX	+,-	MBTPS2,SMPX	-712,-82072
chr5:25445025-25446259	chr5	+	25445024	25445720	True	NR_037896,NM_020227	chr5,chr5	-,+	LOC340107,PRDM9	-604332,-1937359
chr10:116291219-116292389	chr10	+	116291579	116292414	True	NM_020940,NM_006720	chr10,chr10	+,-	FAM160B1,ABLIM1	289088,-4894
chr4:9626059-9626961	chr4	+	9626315	9627006	True	NR_031688,NM_000798	chr4,chr4	-,+	MIR548I2,DRD5	-68378,156251
chr11:85355538-85357519	chr11	+	85355656	85357243	True	NM_001142699,NM_032273	chr11,chr11	-,+	DLG2,TMEM126A	-17342,1719
chr22:29068447-29069082	chr22	+	29068653	29069068	True	NM_001145418,NM_172002	chr22,chr22	-,+	TTC28,HSCB	6842,68974
chr5:99408280-99410072	chr5	+	99409704	99410064	True	NM_198507,NR_027503	chr5,chr5	+,-	FAM174A,LOC100133050	461059,313944
chr1:145522600-145522923	chr1	+	145522698	145522938	True	NR_002328,NM_003846,NM_001184795,NM_003637	chr1,chr1,chr1,chr1	-,+,+,+	GNRHR2,PEX11B,PEX11B,ITGA10	-6622,-6584,-6189,2051
chr9:89773224-89773620	chr9	+	89773268	89773642	True	NR_036691,NM_001001709	chr9,chr9	-,+	LOC494127,C9orf170	-73128,-9767
chr5:74807951-74808740	chr5	+	74808024	74808670	True	NM_005713,NM_031361,NM_016218,NM_001130105	chr5,chr5,chr5,chr5	-,-,+,-	COL4A3BP,COL4A3BP,POLK,COL4A3BP	-570,-570,-418,-218
chr5:177631497-177631752	chr5	+	177631496	177631696	True	NR_003281,NM_031266,NM_004499	chr5,chr5,chr5	-,+,+	GMCL1L,HNRNPAB,HNRNPAB	-17063,-39,-39
chr15:54318484-54319657	chr15	+	54318484	54319360	True	NM_182758,NM_001080534	chr15,chr15	-,+	WDR72,UNC13C	-266625,-13437
chr2:100762053-100763565	chr2	+	100762551	100763401	True	NM_002285,NM_001011717	chr2,chr2	-,+	AFF3,NMS	-3514,323542
chr12:53836514-53836799	chr12	+	53836544	53836668	True	NM_001128911,NM_001128912,NM_001128913,NM_001128914,NM_031989,NM_005016,NM_001005354,NM_001193511,NM_018457,NM_001098620	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,+,+,+,+,+,-,+,+	PCBP2,PCBP2,PCBP2,PCBP2,PCBP2,PCBP2,PRR13,MAP3K12,PRR13,PCBP2	9217,9217,9217,9217,9217,9217,-1163,56832,-1163,9217
chr2:68478302-68478612	chr2	+	68478306	68478618	True	NM_000945,NM_020143	chr2,chr2	-,+	PPP3R1,PNO1	1083,-93352
chr12:22473585-22474763	chr12	+	22473985	22474693	True	NM_018686,NM_003034	chr12,chr12	+,-	CMAS,ST8SIA1	-274877,13013
chr10:23481911-23482164	chr10	+	23481962	23482142	True	NM_153714,NM_178161	chr10,chr10	-,+	C10orf67,PTF1A	151680,-553
chr5:172199056-172199276	chr5	+	172199169	172199319	True	NM_004417,NM_001031711	chr5,chr5	-,+	DUSP1,ERGIC1	-966,61903
chr3:119011037-119012716	chr3	+	119011319	119012619	True	NM_212543,NM_020754	chr3,chr3	-,+	B4GALT4,ARHGAP31	-51567,600
chr12:15359438-15361277	chr12	+	15359575	15361293	True	NM_002848,NM_001190726	chr12,chr12	+,-	PTPRO,RERG	114193,13169
chr18:48712638-48714000	chr18	+	48712638	48713933	True	NM_005359,NM_016626	chr18,chr18	+,-	SMAD4,MEX3C	-156108,10175
chr1:154975572-154975777	chr1	+	154975573	154975825	True	NM_015872,NM_018655,NM_003029	chr1,chr1,chr1	+,+,-	ZBTB7B,LENEP,SHC1	-512,-9562,-28614
chr11:16457734-16458783	chr11	+	16457967	16458488	True	NM_001145811,NM_014267	chr11,chr11	-,+	SOX6,C11orf58	-27537,301659
chr21:42798284-42798541	chr21	+	42798342	42798584	True	NM_002462,NM_001135099,NM_001178046,NM_001144925	chr21,chr21,chr21,chr21	+,-,+,+	MX1,TMPRSS2,MX1,MX1	-415,81458,-290,-5873
chr1:222886585-222886785	chr1	+	222886584	222886704	True	NM_022831,NM_144695	chr1,chr1	-,+	AIDA,BROX	-720,-729
chr9:114523636-114524630	chr9	+	114524163	114524446	True	NM_001080551,NM_001198664	chr9,chr9	-,+	C9orf84,GNG10	-2350,-100381
chr17:8285169-8286283	chr17	+	8285425	8286202	True	NM_000987,NM_153007	chr17,chr17	-,+	RPL26,ODF4	414,-42288
chr7:150412713-150413353	chr7	+	150412873	150413358	True	NM_130759,NM_001199577,NR_024115	chr7,chr7,chr7	+,+,-	GIMAP1,GIMAP1-GIMAP5,GIMAP6	286,286,-83193
chr5:132202811-132203283	chr5	+	132202825	132203311	True	NM_014402,NM_052971,NM_005260	chr5,chr5,chr5	+,+,-	UQCRQ,LEAP2,GDF9	-558,6046,-2348
chr7:63592066-63593037	chr7	+	63592364	63593035	True	NM_001159524,NM_178558	chr7,chr7	+,-	ZNF735,ZNF680	74545,430520
chr1:152770400-152771227	chr1	+	152770651	152771284	True	NM_178352,NM_178351	chr1,chr1	+,-	LCE1D,LCE1C	-1475,7881
chr1:152770400-152771227	chr1	+	152760168	152760657	False	NM_178353,NM_178352,NM_178351	chr1,chr1,chr1	+,+,-	LCE1E,LCE1D,LCE1C	-1466,8569,18501
chr9:80850674-80850988	chr9	+	80850821	80850981	True	NM_001098802,NM_002072,NM_032171	chr9,chr9,chr9	+,-,+	CEP78,GNAQ,CEP78	9,-204602,9
chr11:1893034-1893410	chr11	+	1893064	1893400	True	NR_036185,NM_001013254,NM_001013255,NM_001013253	chr11,chr11,chr11,chr11	-,+,+,+	MIR4298,LSP1,LSP1,LSP1	-12298,-1016,-961,-3212
chr15:91408667-91409903	chr15	+	91408898	91409870	True	NM_198527,NM_002569	chr15,chr15	-,+	HDDC3,FURIN	65954,2014
chr9:135752252-135753024	chr9	+	135752462	135752716	True	NM_152572,NM_018956	chr9,chr9	-,+	AK8,C9orf9	1532,1573
chr13:79230800-79232230	chr13	+	79230804	79232265	True	NM_024546,NM_001161407	chr13,chr13	-,+	RNF219,NDFIP2	1099,822993
chr5:145468351-145469460	chr5	+	145468353	145469250	True	NM_018989,NM_001029869	chr5,chr5	+,-	RBM27,PLAC8L1	113912,14748
chr10:30978439-30978983	chr10	+	30978516	30979019	True	NM_183058,NM_005204	chr10,chr10	-,+	LYZL2,MAP3K8	-59869,-255710
chr7:26577993-26579289	chr7	+	26578018	26579255	True	NR_022006,NM_001145531	chr7,chr7	-,+	KIAA0087,C7orf71	-58,98234
chr2:232826731-232827303	chr2	+	232826819	232826983	True	NM_024409,NM_152383	chr2,chr2	-,+	NPPC,DIS3L2	-35860,-577
chr11:66023327-66023580	chr11	+	66023519	66023588	True	NM_001134775,NM_001134774,NM_001134776,NM_022822,NM_020470	chr11,chr11,chr11,chr11,chr11	+,+,+,+,-	KLC2,KLC2,KLC2,KLC2,YIF1A	1176,1585,1502,1585,33109
chr1:48289354-48290442	chr1	+	48289408	48290419	True	NM_001194986,NM_004474	chr1,chr1	-,+	LOC388630,FOXD2	172194,-387770
chr6:116379996-116381663	chr6	+	116380110	116381625	True	NM_002031,NR_027338	chr6,chr6	-,+	FRK,TPI1P3	346,-20268
chr1:227133215-227133867	chr1	+	227133217	227133819	True	NM_020247,NM_002221	chr1,chr1	+,-	ADCK3,ITPKB	-5330,-206341
chr2:37459044-37459284	chr2	+	37459047	37459321	True	NM_144736,NM_005760,NM_001083946	chr2,chr2,chr2	+,-,+	C2orf56,CEBPZ,C2orf56	-324,-307,-324
chr2:97304608-97304982	chr2	+	97304782	97305000	True	NM_017991,NM_001113382,NM_001115016	chr2,chr2,chr2	-,+,-	KIAA1310,FER1L5,KIAA1310	-667,3573,-667
chr4:56475036-56476484	chr4	+	56475078	56476161	True	NM_152401,NR_003935	chr4,chr4	-,+	PDCL2,LOC644145	-16699,210075
chr15:63569539-63569769	chr15	+	63569739	63569817	True	NM_001218,NM_031301,NM_001145646	chr15,chr15,chr15	-,+,+	CA12,APH1B,APH1B	104308,-41,-41
chr19:1022497-1023424	chr19	+	1022620	1023024	True	NM_004368,NM_033420,NM_001033026,NM_201277	chr19,chr19,chr19,chr19	+,-,-,+	CNN2,C19orf6,C19orf6,CNN2	3273,-1479,-1479,3273
chr5:132106980-132107353	chr5	+	132107119	132107331	True	NM_001039780,NM_001098811,NM_001098813,NM_015146,NM_001098812	chr5,chr5,chr5,chr5,chr5	+,-,-,-,-	CCNI2,SEPT8,SEPT8,SEPT8,SEPT8	-24033,5786,6280,5786,5786
chr17:632666-633406	chr17	+	632893	633306	True	NM_018289,NM_024792	chr17,chr17	-,+	VPS53,FAM57A	-14797,2540
chr1:200182294-200182633	chr1	+	200182486	200182682	True	NM_001105517,NM_012482	chr1,chr1	+,-	FAM58B,ZNF281	-27,196534
chr17:47074645-47075014	chr17	+	47074756	47075038	True	NM_004123,NM_006546,NM_001160423	chr17,chr17,chr17	-,+,+	GIP,IGF2BP1,IGF2BP1	-28801,-33,-33
chr20:32076261-32076642	chr20	+	32076288	32076383	True	NM_001032999,NM_003098	chr20,chr20	+,-	CBFA2T2,SNTA1	1544,-44590
chrX:46434098-46434336	chrX	+	46434098	46434268	True	NM_001190417,NM_019886	chrX,chrX	-,+	ZNF674,CHST7	-29206,-957
chr14:66154654-66156347	chr14	+	66154674	66156243	True	NM_178157,NR_024334	chr14,chr14	+,-	FUT8,LOC645431	-18592,-275339
chr17:46622520-46624059	chr17	+	46622576	46624094	True	NM_002145,NR_033201	chr17,chr17	-,+	HOXB2,LOC404266	-183,43728
chr22:50636174-50636793	chr22	+	50636249	50636833	True	NM_031454,NM_020461	chr22,chr22	+,-	SELO,TUBGCP6	2574,46617
chr4:140049283-140050385	chr4	+	140049506	140050434	True	NM_201999,NM_012118	chr4,chr4	-,+	ELF2,CCRN4L	10222,-112620
chr14:51707020-51708568	chr14	+	51707082	51708489	True	NM_052978,NM_030755	chr14,chr14	-,+	TRIM9,TMX1	-144660,-247
chr6:141170039-141170464	chr6	+	141170106	141170496	True	NR_037441,NM_002511	chr6,chr6	+,-	MIR3668,NMBR	-643776,1239496
chr19:2900753-2900961	chr19	+	2900906	2901010	True	NM_021217,NM_173480	chr19,chr19	-,+	ZNF77,ZNF57	44009,-61
chr4:186347360-186347905	chr4	+	186347510	186347912	True	NR_028085,NM_001114357,NM_018359	chr4,chr4,chr4	-,+,-	UFSP2,C4orf47,UFSP2	-371,2632,-371
chr9:128473633-128474114	chr9	+	128473954	128474160	True	NM_001006621,NM_001006619,NM_024117,NM_001006620,NM_006195,NM_001006617,NM_001006618	chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,-,-,-,+,-,-	MAPKAP1,MAPKAP1,MAPKAP1,MAPKAP1,PBX3,MAPKAP1,MAPKAP1	-4441,-4441,-4441,-4441,35456,-4441,-4441
chr8:134306457-134307748	chr8	+	134306537	134307457	True	NM_001135242,NR_037944,NM_006096	chr8,chr8,chr8	-,+,-	NDRG1,WISP1,NDRG1	2140,-103306,2140
chr8:63161975-63162355	chr8	+	63162003	63162335	True	NM_173688,NM_001164756	chr8,chr8	+,-	NKAIN3,ASPH	-553,-534804
chr9:107509430-107509929	chr9	+	107509469	107509837	True	NM_015469,NM_001001956	chr9,chr9	+,-	NIPSNAP3A,OR13C9	131,-128984
chr3:15469730-15470018	chr3	+	15469766	15470060	True	NM_033083,NM_152396	chr3,chr3	+,-	EAF1,METTL6	-753,-724
chr17:33889167-33890348	chr17	+	33889412	33889971	True	NR_003037,NM_001129820	chr17,chr17	+,-	SNORD7,SLFN14	10704,-4302
chr11:126171387-126172058	chr11	+	126171749	126171915	True	NM_014026,NM_003139	chr11,chr11	+,-	DCPS,SRPR	1731,-32872
chr1:48458298-48458567	chr1	+	48458310	48458586	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	4026,229770
chr19:49459001-49459216	chr19	+	49459000	49459254	True	NM_000146,NM_004324,NM_138764,NM_001161587,NM_138763,NM_138761,NR_027882	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,-,+,+,+	FTL,BAX,BAX,GYS1,BAX,BAX,BAX	9311,-934,-934,37406,-934,-934,-934
chr15:71186392-71188224	chr15	+	71186641	71188276	True	NM_001199018,NM_020147,NM_001199017,NM_017691	chr15,chr15,chr15,chr15	+,-,+,+	LRRC49,THAP10,LRRC49,LRRC49	-1682,-1869,-1773,-1773
chr8:21913419-21914343	chr8	+	21913435	21914229	True	NM_001978,NM_024815,NM_001114135,NM_001114137,NM_001114136,NM_001114139,NM_001114138	chr8,chr8,chr8,chr8,chr8,chr8,chr8	+,-,+,+,+,+,+	EPB49,NUDT18,EPB49,EPB49,EPB49,EPB49,EPB49	2456,52753,1146,-2405,-1158,-1158,2456
chr18:21168743-21169796	chr18	+	21168956	21169719	True	NM_013326,NM_000271	chr18,chr18	+,-	C18orf8,NPC1	-85545,-2375
chr8:36741973-36742792	chr8	+	36742311	36742810	True	NM_001031836,NR_003671	chr8,chr8	+,-	KCNU1,LOC728024	-100520,862804
chr20:42199297-42200132	chr20	+	42199318	42200113	True	NM_016276,NM_001199264,NM_001008901	chr20,chr20,chr20	+,+,-	SGK2,SGK2,GTSF1L	-4632,-5614,155579
chr8:99082604-99084582	chr8	+	99083098	99084412	True	NM_001170806,NM_000989,NM_173549	chr8,chr8,chr8	+,-,+	C8orf47,RPL30,C8orf47	-6399,-25280,-6399
chr6:35700921-35701376	chr6	+	35700973	35701301	True	NR_027117,NM_001145775,NM_145028	chr6,chr6,chr6	-,-,+	LOC285847,FKBP5,C6orf81	3481,-4613,3557
chr10:47746587-47746934	chr10	+	47746617	47746865	True	NR_024495,NM_001630	chr10,chr10	-,+	LOC642826,ANXA8L2	-503123,54
chr10:47746587-47746934	chr10	-	47174164	47174226	False	NM_001137549,NM_001137548,NM_005972,NM_001137556,NM_001098845,NM_001040084	chr10,chr10,chr10,chr10,chr10,chr10	-,-,+,-,-,-	FAM25G,FAM25C,PPYR1,FAM25B,ANXA8L1,ANXA8	7512,7512,-90681,7512,-124,-42
chr10:47746587-47746934	chr10	+	48255120	48255182	False	NM_001137549,NM_001137548,NM_001137556,NM_001098845,NM_001040084,NM_002900	chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,-	FAM25G,FAM25C,FAM25B,ANXA8L1,ANXA8,RBP3	-7509,-7509,-7509,124,42,135859
chr22:46401511-46401964	chr22	+	46401579	46401667	True	NM_058238,NR_027240	chr22,chr22	-,+	WNT7B,LOC730668	-28571,828
chr16:84682901-84683201	chr16	+	84682909	84683159	True	NM_021149,NM_024731	chr16,chr16	-,+	COTL1,KLHL36	-31240,-829
chr6:14844377-14844822	chr6	+	14844549	14844774	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	401752,818565
chr1:113503143-113504253	chr1	+	113503142	113503428	True	NM_003051,NR_002796,NM_001166496	chr1,chr1,chr1	-,+,-	SLC16A1,AKR7A2P1,SLC16A1	-4167,-37221,-4457
chr17:73084790-73085771	chr17	+	73084962	73085568	True	NM_014595,NM_006356,NM_004695	chr17,chr17,chr17	-,-,+	NT5C,ATP5H,SLC16A5	42359,-41888,-958
chr19:39420050-39420498	chr19	+	39420217	39420511	True	NM_017827,NM_001145901,NM_021107,NM_033362,NM_033363	chr19,chr19,chr19,chr19,chr19	-,-,+,+,+	SARS2,SARS2,MRPS12,MRPS12,MRPS12	1075,1075,1082,836,1082
chr1:241866894-241868563	chr1	+	241866893	241868531	True	NM_014322,NM_144625	chr1,chr1	-,+	OPN3,WDR64	-63192,-51368
chr5:150038262-150038620	chr5	+	150038299	150038605	True	NM_001122853,NM_018047,NM_133371	chr5,chr5,chr5	+,-,+	MYOZ3,RBM22,MYOZ3	1798,42114,1798
chr9:37787491-37788024	chr9	+	37787513	37787623	True	NM_016042,NM_001002269,NM_024345	chr9,chr9,chr9	-,-,+	EXOSC3,EXOSC3,DCAF10	-2448,-2446,13166
chr2:160575645-160577459	chr2	+	160576061	160577398	True	NM_001198763,NM_022826	chr2,chr2	-,+	CD302,MARCH7	77424,-7108
chr8:141644613-141644840	chr8	+	141644654	141644888	True	NR_023360,NM_001164623,NM_012154	chr8,chr8,chr8	+,-,-	CHRAC1,EIF2C2,EIF2C2	-123293,808,808
chr6:18167442-18167795	chr6	+	18167629	18167714	True	NM_000367,NM_153042	chr6,chr6	-,+	TPMT,KDM1B	-12255,-12071
chr2:42990686-42991557	chr2	+	42990732	42991376	True	NM_148962,NM_020744	chr2,chr2	-,+	OXER1,MTA3	75,-195112
chr2:135805558-135806552	chr2	+	135805756	135806252	True	NM_025052,NM_012233,NM_001172435	chr2,chr2,chr2	-,+,+	YSK4,RAB3GAP1,RAB3GAP1	-23508,3582,3582
chr17:45929411-45929681	chr17	+	45929455	45929724	True	NM_199262,NM_033413	chr17,chr17	-,+	SP6,LRRC46	3566,-20514
chrY:21664686-21664969	chrY	+	21664725	21664991	True	NR_002923,NM_001005852,NR_033732	chrY,chrY,chrY	-,+,-	BCORP1,CYorf15A,BCORP1	98,64243,98
chr10:82296366-82297613	chr10	+	82296562	82297430	True	NM_207372,NM_138812,NM_001145719	chr10,chr10,chr10	+,-,+	SH2D4B,DYDC1,SH2D4B	227,-180062,3144
chr17:37305965-37307397	chr17	+	37306078	37307442	True	NM_020405,NM_000981	chr17,chr17	-,+	PLXDC1,RPL19	510,49093
chr1:26516621-26517984	chr1	+	26516983	26517837	True	NM_198137,NM_001077262	chr1,chr1	+,-	CATSPER4,UBXN11	85,115408
chr3:183853027-183853242	chr3	+	183853051	183853119	True	NM_003907,NM_005787	chr3,chr3	+,-	EIF2B5,ALG3	-292,113690
chr7:140098661-140099475	chr7	+	140099157	140099341	True	NM_207113,NM_032295,NM_001008749	chr7,chr7,chr7	-,-,+	SLC37A3,SLC37A3,RAB19	-846,-846,4501
chr13:115080329-115081604	chr13	+	115080356	115081180	True	NM_001164145,NM_001164144,NM_007368	chr13,chr13,chr13	+,+,-	ZNF828,ZNF828,RASA3	-442,-442,-182261
chr19:7539423-7540887	chr19	+	7539570	7540717	True	NR_024491,NM_198534	chr19,chr19	-,+	LOC100128573,C19orf45	-1323,21727
chr19:22880903-22881637	chr19	+	22881037	22881453	True	NM_020855,NM_001080409	chr19,chr19	+,-	ZNF492,ZNF99	-63962,71387
chr17:79446299-79446795	chr17	+	79446303	79446667	True	NM_001077182,NR_036152	chr17,chr17	+,-	FSCN2,MIR3186	48749,-28089
chr22:19741973-19742472	chr22	+	19742025	19742497	True	NM_005992,NM_024627,NM_080647,NM_080646	chr22,chr22,chr22,chr22	+,-,+,+	TBX1,C22orf29,TBX1,TBX1	1728,99924,1728,1728
chr19:18939518-18940622	chr19	+	18939734	18940075	True	NM_000095,NM_002911	chr19,chr19	-,+	COMP,UPF1	-37620,2668
chr2:219907137-219907466	chr2	+	219907144	219907375	True	NM_194302,NM_152389,NR_024385	chr2,chr2,chr2	-,-,+	CCDC108,CCDC108,LOC151300	-899,-899,-66197
chr13:20738184-20738543	chr13	+	20738288	20738389	True	NM_021954,NM_001190965	chr13,chr13	-,+	GJA3,ZMYM2	-3105,-205374
chr11:64828641-64829101	chr11	+	64828714	64828969	True	NM_005468,NM_013299	chr11,chr11	-,+	NAALADL1,SAC3D1	-2705,-20390
chr1:23619451-23620371	chr1	+	23619472	23620169	True	NR_033690,NM_001102397	chr1,chr1	+,-	C1orf213,HNRNPR	75294,50741
chr13:23759622-23759864	chr13	+	23759650	23759912	True	NM_000231,NM_014363	chr13,chr13	+,-	SGCG,SACS	-4641,247979
chr14:91884556-91884852	chr14	+	91884568	91884896	True	NM_001080414,NR_003709	chr14,chr14	-,+	CCDC88C,SNORA11B	-435,-291849
chr9:130363180-130364727	chr9	+	130363226	130364338	True	NM_001032221,NM_001035534	chr9,chr9	+,-	STXBP1,FAM129B	10147,-21958
chr8:48874027-48875733	chr8	+	48874295	48875736	True	NM_001081640,NM_182746,NM_006904,NM_005914	chr8,chr8,chr8,chr8	-,+,-,+	PRKDC,MCM4,PRKDC,MCM4	-1552,-1583,-1552,-1583
chr2:27306724-27308091	chr2	+	27307004	27307898	True	NM_007046,NM_006488,NM_000221,NM_001134693	chr2,chr2,chr2,chr2	+,+,+,-	EMILIN1,KHK,KHK,OST4	-5620,1712,1712,-12437
chrX:47062697-47063076	chrX	+	47062779	47063103	True	NM_003334,NR_024235,NR_024616	chrX,chrX,chrX	+,-,+	UBA1,NDUFB11,INE1	-9629,-58170,1143
chr3:47051149-47051364	chr3	+	47051148	47051230	True	NR_024046,NM_144716	chr3,chr3	+,-	NRADDP,CCDC12	1801,-32878
chr13:74709889-74710404	chr13	+	74709959	74710311	True	NR_034024,NM_007249	chr13,chr13	+,-	LOC338864,KLF12	416668,-1893
chr12:58021711-58022027	chr12	+	58021940	58022042	True	NM_001478,NM_133489	chr12,chr12	-,+	B4GALNT1,SLC26A10	4993,-8298
chr6:6618920-6619562	chr6	+	6618925	6619589	True	NM_004271,NR_026970	chr6,chr6	+,-	LY86,LY86-AS1	-30043,3520
chr13:21100519-21101151	chr13	+	21100575	21101124	True	NM_006531,NM_015974	chr13,chr13	+,-	IFT88,CRYL1	40083,-563
chr11:108197848-108199132	chr11	+	108197960	108198863	True	NM_000051,NM_002519	chr11,chr11	+,-	ATM,NPAT	-104452,-104595
chr17:33464334-33465621	chr17	+	33464371	33465316	True	NM_173167,NM_001014445,NM_001033576,NM_018096	chr17,chr17,chr17,chr17	+,-,+,-	UNC45B,NLE1,UNC45B,NLE1	9519,4057,9519,4057
chr8:124409032-124409403	chr8	+	124409120	124409359	True	NM_018024,NM_014109	chr8,chr8	+,-	WDYHV1,ATAD2	19605,-415
chr12:122063890-122064210	chr12	+	122063896	122064096	True	NM_173855,NM_032790	chr12,chr12	-,+	MORN3,ORAI1	43514,358
chr8:101735547-101735902	chr8	+	101735614	101735912	True	NR_033962,NM_002568	chr8,chr8	+,-	FLJ42969,PABPC1	328369,-1299
chr1:184357022-184357554	chr1	+	184357052	184357576	True	NM_015101,NM_030806	chr1,chr1	-,+	GLT25D2,C1orf21	-350189,-953
chr1:161122968-161123499	chr1	+	161123051	161123533	True	NM_032998,NM_012475,NM_001014443,NM_016406	chr1,chr1,chr1,chr1	-,+,+,+	DEDD,USP21,USP21,UFC1	-20573,5720,5720,0
chr16:31455149-31456232	chr16	+	31455361	31456142	True	NM_001136509,NM_001105247	chr16,chr16	-,+	ZNF843,ARMC5	-1013,14174
chr1:220102359-220103014	chr1	+	220102379	220102849	True	NM_018060,NM_018713	chr1,chr1	+,-	IARS2,SLC30A10	164605,-386
chr19:9095795-9096182	chr19	+	9096033	9096217	True	NM_001004456,NM_024690	chr19,chr19	+,-	OR1M1,MUC16	107703,-4015
chr17:20226215-20228121	chr17	+	20226380	20227278	True	NM_001042685,NR_023380	chr17,chr17	-,+	LGALS9B,CCDC144C	143633,-1951
chr17:20226215-20228121	chr17	-	20796989	20797733	False	NM_001004306,NM_015510	chr17,chr17	-,+	CCDC144NL,DHRS7B	1770,232524
chr17:20226215-20228121	chr17	+	16595178	16595597	False	NM_020787,NM_014695	chr17,chr17	-,+	ZNF624,CCDC144A	-38011,-1597
chr17:20226215-20228121	chr17	-	18526100	18526846	False	NR_036647,NM_001037330	chr17,chr17	-,+	CCDC144B,TRIM16L	2134,98555
chr16:81067353-81069347	chr16	+	81067497	81069253	True	NM_020188,NM_015251	chr16,chr16	-,+	C16orf61,ATMIN	-26995,204
chr21:40138560-40138946	chr21	+	40138895	40138961	True	NM_005239,NR_027066,NR_027065	chr21,chr21,chr21	+,-,-	ETS2,NCRNA00114,NCRNA00114	38887,1987,6490
chr11:111957759-111958214	chr11	+	111957776	111958246	True	NM_003002,NR_028383,NM_012459	chr11,chr11,chr11	+,-,-	SDHD,TIMM8B,TIMM8B	-256,-254,-254
chr1:182359904-182360142	chr1	+	182359904	182360130	True	NR_034131,NM_001033044,NM_002065,NM_001033056,NM_172000	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	NCRNA00272,GLUL,GLUL,GLUL,TEDDM1	16625,1261,1261,459,9671
chr1:220268539-220269860	chr1	+	220268940	220269836	True	NM_006085,NM_018060	chr1,chr1	-,+	BPNT1,IARS2	-5749,-1536
chr1:203695866-203696671	chr1	+	203695958	203696566	True	NR_027902,NR_003019	chr1,chr1	-,+	C1orf157,SNORA77	313876,2142
chr19:19496986-19497577	chr19	+	19497007	19497067	True	NM_172231,NM_017660	chr19,chr19	-,+	SUGP1,GATAD2A	-65700,-416
chr5:140044730-140045034	chr5	+	140044786	140044936	True	NM_017706,NM_194249	chr5,chr5	+,-	WDR55,DND1	-464,8286
chr5:145830459-145831044	chr5	+	145830460	145830826	True	NM_006706,NM_001040006,NM_194251	chr5,chr5,chr5	+,+,-	TCERG1,TCERG1,GPR151	-3652,-3652,64900
chr1:55349269-55350504	chr1	+	55349289	55350433	True	NM_014762,NM_152607	chr1,chr1	-,+	DHCR24,C1orf177	2540,-77604
chr2:101093154-101093977	chr2	+	101093159	101093949	True	NM_004854,NM_001011717	chr2,chr2	-,+	CHST10,NMS	-59029,-6266
chr16:75741931-75743866	chr16	+	75742020	75743508	True	NM_005548,NM_018975	chr16,chr16	-,+	KARS,TERF2IP	-60435,-60436
chr11:61557876-61558187	chr11	+	61557885	61558225	True	NR_030342,NM_014206,NM_004111	chr11,chr11,chr11	-,-,+	MIR611,C11orf10,FEN1	1858,1910,1924
chr10:124769213-124771133	chr10	+	124769223	124771012	True	NM_001609,NM_022466	chr10,chr10	+,-	ACADSB,IKZF5	-852,-912
chr8:16859752-16859953	chr8	+	16859768	16859998	True	NM_181723,NM_019851	chr8,chr8	+,-	EFHA2,FGF20	24748,-94
chr1:99128100-99129938	chr1	+	99128368	99129682	True	NM_001010861,NR_033716,NM_152238,NM_015976	chr1,chr1,chr1,chr1	-,+,+,+	LPPR5,SNX7,SNX7,SNX7	340818,-1183,-1183,-1183
chr12:49993250-49993676	chr12	+	49993254	49993606	True	NM_012272,NR_027450,NM_032130	chr12,chr12,chr12	+,-,-	PRPF40B,FAM186B,FAM186B	23796,5854,5877
chrX:100340512-100341316	chrX	+	100340968	100341058	True	NM_021637,NM_024917	chrX,chrX	+,-	TMEM35,TRMT2B	-7198,-33863
chr1:3690079-3690335	chr1	+	3690112	3690174	True	NM_020710,NM_001163724	chr1,chr1	-,+	LRRC47,LOC388588	22944,-811
chr18:57568514-57569933	chr18	+	57568565	57569972	True	NM_133459,NM_021127	chr18,chr18	-,+	CCBE1,PMAIP1	-203921,-1424
chr8:144815273-144815484	chr8	+	144815325	144815463	True	NM_198488,NR_033849	chr8,chr8	-,+	FAM83H,LOC100128338	501,846
chr9:140125865-140126069	chr9	+	140125895	140126031	True	NM_001190228,NM_080877,NM_006088,NM_001177316,NM_001177317,NM_031297,NM_199001	chr9,chr9,chr9,chr9,chr9,chr9,chr9	+,+,+,+,+,-,+	LOC643596,SLC34A3,TUBB2C,SLC34A3,SLC34A3,RNF208,C9orf169	-3928,-561,9679,-737,-737,-10120,-6302
chr4:184824349-184826345	chr4	+	184824368	184826293	True	NM_020225,NM_152682	chr4,chr4	+,-	STOX2,RWDD4	215,-244037
chr14:23233425-23234622	chr14	+	23233508	23234538	True	NM_005015,NM_001126105	chr14,chr14	+,-	OXA1L,SLC7A7	1192,50590
chr13:114059534-114059936	chr13	+	114059761	114059955	True	NM_024719,NM_017905	chr13,chr13	-,+	GRTP1,TMCO3	-41298,85352
chr11:2182670-2182961	chr11	+	2182705	2182775	True	NR_028044,NM_000207,NR_003512,NM_001185098,NM_001042376,NM_001185097	chr11,chr11,chr11,chr11,chr11,chr11	+,-,-,-,-,-	IGF2AS,INS,INS-IGF2,INS,INS-IGF2,INS	-20998,-266,-266,-266,-266,-266
chr8:76288199-76288811	chr8	+	76288376	76288790	True	NM_004133,NM_020647	chr8,chr8	+,-	HNF4G,JPH1	163412,-1054814
chr4:46877934-46878716	chr4	+	46877976	46878423	True	NM_130902,NM_000812	chr4,chr4	-,+	COX7B2,GABRB1	32886,154871
chr17:40714175-40714492	chr17	+	40714187	40714341	True	NM_170607,NM_198204,NM_198205,NM_025233,NM_001042531,NM_001042530,NM_001042532,NM_013290,NM_001042529	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,+,+,-,+	MLX,MLX,MLX,COASY,COASY,COASY,COASY,PSMC3IP,COASY	4736,4736,4736,-146,-146,-146,-146,15456,-146
chr8:110985504-110986147	chr8	+	110985679	110986089	True	NM_014379,NM_004215	chr8,chr8	-,+	KCNV1,EBAG9	920,-433427
chr14:76451942-76452244	chr14	+	76451952	76452196	True	NM_001102564,NM_052873,NM_003239	chr14,chr14,chr14	+,+,-	C14orf179,C14orf179,TGFB3	45,45,-3860
chr2:189837585-189839118	chr2	+	189837699	189839117	True	NR_036076,NR_031647,NM_000090	chr2,chr2,chr2	-,+,+	MIR3129,MIR1245,COL3A1	158770,3700,-19
chr1:55273635-55274145	chr1	+	55273721	55274085	True	NM_017904,NM_001114108,NM_152607,NM_001110533	chr1,chr1,chr1,chr1	-,-,+,+	TTC22,TTC22,C1orf177,C1orf177	-6780,-6780,-2036,-2036
chr1:29061378-29061771	chr1	+	29061396	29061658	True	NM_001173128,NM_001172828,NM_005644,NM_016258	chr1,chr1,chr1,chr1	+,+,-,+	YTHDF2,YTHDF2,TAF12,YTHDF2	1474,1793,-91792,1477
chr18:48494956-48496670	chr18	+	48495013	48496293	True	NM_018696,NM_001127174	chr18,chr18	+,-	ELAC1,MRO	-677,-143259
chr9:131942897-131943749	chr9	+	131942902	131943748	True	NM_203434,NM_001193397	chr9,chr9	-,+	IER5L,PPP2R4	-2362,-68986
chr11:67070524-67070744	chr11	+	67070531	67070729	True	NM_021173,NM_017857	chr11,chr11	-,+	POLD4,SSH3	50373,189
chr11:62606369-62606625	chr11	+	62606421	62606565	True	NM_003164,NM_018093,NM_001012662	chr11,chr11,chr11	-,-,+	STX5,WDR74,SLC3A2	-6861,1113,16918
chr7:143582257-143582479	chr7	+	143582274	143582426	True	NM_014719,NM_001004685	chr7,chr7	-,+	FAM115A,OR2F2	16796,49899
chr6:99872806-99873051	chr6	+	99872809	99873083	True	NM_032870,NM_015491,NM_001195131	chr6,chr6,chr6	-,-,+	SFRS18,SFRS18,LOC100130890	174,174,95786
chr9:104362159-104363032	chr9	+	104362170	104363080	True	NM_019592,NM_147180	chr9,chr9	+,-	RNF20,PPP3R2	-66095,-4887
chrX:117958090-117958369	chrX	+	117958192	117958352	True	NM_173798,NM_020721	chrX,chrX	+,-	ZCCHC12,KIAA1210	-456,326240
chr10:106098375-106098757	chr10	+	106098385	106098665	True	NM_001008723,NM_033397	chr10,chr10	+,-	CCDC147,ITPRIP	14856,-4722
chr16:46602212-46602464	chr16	+	46602342	46602419	True	NR_026556,NM_014321	chr16,chr16	-,+	ANKRD26P1,ORC6	645,121138
chr1:92545956-92546229	chr1	+	92545958	92546263	True	NM_001195684,NM_183242	chr1,chr1	-,+	TGFBR3,BTBD8	-174399,-147
chr14:36989663-36989934	chr14	+	36989745	36989957	True	NM_003317,NM_006194,NM_001101341,NM_001079668	chr14,chr14,chr14,chr14	-,+,-,-	NKX2-1,PAX9,SFTA3,NKX2-1	-842,136815,-6755,-315
chr5:140805884-140807090	chr5	+	140806067	140807072	True	NM_032091,NM_018927,NM_032092,NM_003735,NM_032101,NM_005642,NM_018914,NR_001297,NM_032094	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,-,+,+,+	PCDHGA11,PCDHGB7,PCDHGA11,PCDHGA12,PCDHGB7,TAF7,PCDHGA11,PCDHGB8P,PCDHGA12	-5589,-8866,-5589,3085,-8912,-105716,-5589,-273,3085
chr4:186125396-186126210	chr4	+	186125425	186126207	True	NM_020827,NM_031953	chr4,chr4	-,+	KIAA1430,SNX25	-243,5076
chr22:36631774-36632661	chr22	+	36631943	36632659	True	NM_030882,NM_145637,NM_001136540	chr22,chr22,chr22	-,-,+	APOL2,APOL2,APOL1	3080,3391,16457
chr4:145975564-145976564	chr4	+	145975873	145976329	True	NM_001040876,NM_014885	chr4,chr4	+,-	ABCE1,ANAPC10	42826,43096
chr19:29386832-29387206	chr19	+	29387022	29387248	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	68789,316938
chr12:20521872-20522228	chr12	+	20521954	20522074	True	NM_000921,NM_021094	chr12,chr12	+,-	PDE3A,SLCO1A2	122,965808
chr1:93293800-93295062	chr1	+	93293840	93294866	True	NR_000006,NM_000969,NM_005665	chr1,chr1,chr1	+,+,-	SNORD21,RPL5,EVI5	7979,2727,-35879
chr7:123387895-123388412	chr7	+	123387955	123388356	True	NM_003941,NR_002731	chr7,chr7	-,+	WASL,HYALP1	810,65836
chr13:76055260-76055560	chr13	+	76055480	76055576	True	NM_014832,NM_006002	chr13,chr13	-,+	TBC1D4,UCHL3	724,68350
chr8:143694536-143694884	chr8	+	143694661	143694911	True	NM_015193,NR_033343	chr8,chr8	-,+	ARC,PSCA	972,56814
chr22:25779789-25780117	chr22	+	25779829	25780143	True	NM_001135772,NR_033733	chr22,chr22	-,+	LRP5L,CRYBB2P1	-2285,63910
chr1:182361560-182361816	chr1	+	182361631	182361799	True	NR_034131,NM_001033044,NM_002065,NM_001033056,NM_172000	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	NCRNA00272,GLUL,GLUL,GLUL,TEDDM1	14956,-290,-290,-1092,8002
chrX:108976705-108977242	chrX	+	108976786	108977266	True	NM_004458,NM_022977,NM_018698	chrX,chrX,chrX	-,-,+	ACSL4,ACSL4,NXT2	-165,-165,-197827
chr10:49369207-49369472	chr10	+	49369211	49369517	True	NR_033172,NM_002750	chr10,chr10	-,+	FRMPD2P1,MAPK8	13781,240169
chr10:49369207-49369472	chr10	+	46661745	46662056	False	NR_027632,NM_015605	chr10,chr10	+,-	FAM35B,PTPN20B	235584,-20742
chr10:49369207-49369472	chr10	+	48848646	48848957	False	NR_033172,NM_153034	chr10,chr10	-,+	FRMPD2P1,ZNF488	13789,-493608
chr14:55501872-55503355	chr14	+	55501879	55503048	True	NM_199421,NM_007086,NM_001008396,NM_080867	chr14,chr14,chr14,chr14	+,-,-,+	SOCS4,WDHD1,WDHD1,SOCS4	-8086,-8060,-8060,-8086
chr11:77770423-77771823	chr11	+	77770426	77771832	True	NM_001203260,NM_003251	chr11,chr11	-,+	NDUFC2-KCTD14,THRSP	19483,3074
chr19:5621838-5622064	chr19	+	5621843	5622055	True	NM_001201338,NM_001201339,NR_037699,NM_002967,NM_014649,NM_001201340	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,-,+	SAFB,SAFB,SAFB,SAFB,SAFB2,SAFB	990,990,990,990,933,990
chr10:11563672-11564431	chr10	+	11563701	11564479	True	NM_001080491,NM_024693	chr10,chr10	-,+	USP6NL,ECHDC3	9845,219876
chr16:85204261-85204499	chr16	+	85204358	85204482	True	NR_033984,NM_198491	chr16,chr16	+,-	LOC400548,FAM92B	-33653,-58244
chr1:3667831-3668324	chr1	+	3667975	3668163	True	NR_033709,NR_033708,NR_033710,NR_033711,NR_033712,NM_152492	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,+	KIAA0495,KIAA0495,KIAA0495,KIAA0495,KIAA0495,CCDC27	-4038,-4038,-4038,-4038,-4640,801
chr7:72570350-72570706	chr7	+	72570419	72570748	True	NR_002206,NR_003664,NR_003580	chr7,chr7,chr7	+,-,+	GTF2IP1,SPDYE8P,LOC100093631	-1444,-70110,-1458
chr7:72570350-72570706	chr7	-	99868224	99868274	False	NR_028040,NM_001004351,NR_028039,NR_028038,NM_178831	chr7,chr7,chr7,chr7,chr7	-,+,-,-,-	GATS,SPDYE3,GATS,GATS,GATS	1631,37050,1631,1631,1631
chr7:72570350-72570706	chr7	+	74380177	74380506	False	NM_001025202,NM_001145063	chr7,chr7	-,+	STAG3L2,GATSL1	-73446,-1145
chr7:72570350-72570706	chr7	-	74651726	74652055	False	NR_002206,NM_001003795,NR_003580	chr7,chr7,chr7	-,+,-	GTF2IP1,GTF2IRD2B,LOC100093631	1440,-143430,1454
chr7:72570350-72570706	chr7	-	74865943	74866272	False	NM_001145064,NR_003664	chr7,chr7	-,+	GATSL2,SPDYE8P	1119,70260
chr4:66534038-66534254	chr4	+	66534062	66534268	True	NR_034138,NM_182472,NM_004439	chr4,chr4,chr4	+,-,-	LOC100144602,EPHA5,EPHA5	1410,1435,1435
chr5:179160419-179160682	chr5	+	179160470	179160732	True	NM_014757,NM_001164444	chr5,chr5	+,-	MAML1,CBY3	-670,-52495
chr7:74489854-74490055	chr7	+	74489874	74489936	True	NM_030798,NM_001003795	chr7,chr7	-,+	WBSCR16,GTF2IRD2B	-175,18410
chr16:30676311-30676654	chr16	+	30676343	30676665	True	NM_138447,NM_001105079	chr16,chr16	-,+	ZNF689,FBRS	-54661,-622
chr5:100237277-100237683	chr5	+	100237294	100237732	True	NM_005668,NM_175052,NM_198507	chr5,chr5,chr5	-,-,+	ST8SIA4,ST8SIA4,FAM174A	1305,1288,-366221
chr12:20863232-20863467	chr12	+	20863267	20863467	True	NM_021094,NM_017435	chr12,chr12	-,+	SLCO1A2,SLCO1C1	624415,-14932
chr1:25258262-25258477	chr1	+	25258297	25258523	True	NM_013943,NM_004350	chr1,chr1	+,-	CLIC4,RUNX3	-186588,-1527
chr9:102879581-102879782	chr9	+	102879635	102879783	True	NM_015051,NM_183245	chr9,chr9	-,+	ERP44,INVS	-18305,-18175
chr12:95466383-95466689	chr12	+	95466393	95466687	True	NM_001127362,NM_017599,NM_001032287,NM_003297	chr12,chr12,chr12,chr12	-,+,-,-	NR2C1,VEZT,NR2C1,NR2C1	767,144834,767,767
chr6:31781378-31781745	chr6_qbl_hap6	+	3075114	3075442	False	NM_005345,NM_005527,NM_021177	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	+,-,-	HSPA1A,HSPA1L,LSM2	1495,1090,-6734
chr6:31781378-31781745	chr6_dbb_hap3	+	3067053	3067381	False	NM_005345,NM_005527,NM_021177	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	+,-,-	HSPA1A,HSPA1L,LSM2	1496,1091,-6727
chr6:31781378-31781745	chr6	+	31781466	31781794	True	NM_005345,NM_005527,NM_021177	chr6,chr6,chr6	+,-,-	HSPA1A,HSPA1L,LSM2	1496,1091,-6723
chr6:31781378-31781745	chr6_apd_hap1	+	3096227	3096555	False	NM_005345,NM_005527,NM_021177	chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1	+,-,-	HSPA1A,HSPA1L,LSM2	1496,1091,-6733
chr6:31781378-31781745	chr6_cox_hap2	+	3291047	3291375	False	NM_005345,NM_005527,NM_021177	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,-,-	HSPA1A,HSPA1L,LSM2	1495,1090,-6733
chr8:86778910-86780032	chr8	+	86779833	86779913	True	NR_003594,NM_172239	chr8,chr8	-,-	REXO1L2P,REXO1L1	-3705,9443
chr8:86778910-86780032	chr8	+	86767638	86767718	False	NR_003594	chr8	-	REXO1L2P	8460
chr8:86778910-86780032	chr8	+	86795111	86795191	False	NR_003594,NM_172239	chr8,chr8	-,-	REXO1L2P,REXO1L1	-6789,-5805
chr5:72116733-72118713	chr5	+	72116733	72118346	True	NM_152625,NM_002270	chr5,chr5	-,+	ZNF366,TNPO1	-313484,-4375
chr10:72199552-72200064	chr10	+	72199848	72200032	True	NM_018055,NM_004096	chr10,chr10	-,+	NODAL,EIF4EBP2	1483,-36045
chr3:56796296-56796507	chr3	+	56796308	56796502	True	NM_001128616,NR_024460	chr3,chr3	-,+	ARHGEF3,CCDC66	13293,-205175
chr1:48244917-48246199	chr1	+	48245079	48246217	True	NM_001194986,NM_004474	chr1,chr1	-,+	LOC388630,FOXD2	216395,-343441
chr17:40897001-40897417	chr17	+	40897128	40897450	True	NM_005854,NM_001991	chr17,chr17	+,-	RAMP2,EZH1	15761,-57
chr19:2945705-2946677	chr19	+	2945835	2946548	True	NM_021217,NM_001143986	chr19,chr19	-,+	ZNF77,TLE6	-866,30987
chr19:45656004-45656295	chr19	+	45656012	45656312	True	NM_212550,NM_198478	chr19,chr19	+,-	BLOC1S3,NKPD1	25690,7146
chr19:55014596-55016119	chr19	+	55014768	55015765	True	NM_145057,NM_021270,NM_002288	chr19,chr19,chr19	-,+,+	CDC42EP5,LAIR2,LAIR2	-30346,-806,-806
chr19:55014596-55016119	chr19	-	54875788	54876084	False	NM_002287,NM_021706,NM_001005367	chr19,chr19,chr19	-,-,+	LAIR1,LAIR1,TTYH1	687,687,50520
chr3:140696628-140697168	chr3	+	140696663	140697216	True	NM_001178140,NM_018155	chr3,chr3	-,+	TFDP2,SLC25A36	1022068,-36061
chr17:80273370-80273664	chr17	+	80273643	80273705	True	NM_207459,NM_006137	chr17,chr17	+,-	TEX19,CD7	43417,1825
chr8:33459037-33459457	chr8	+	33459232	33459364	True	NM_032509,NM_024025	chr8,chr8	+,-	MAK16,DUSP26	-116603,-1793
chr1:109257512-109257714	chr1	+	109257522	109257767	True	NM_144584,NM_001144937	chr1,chr1	-,+	HENMT1,FNDC7	-53374,-2018
chr2:228336226-228336751	chr2	+	228336242	228336762	True	NM_024795,NM_001135187,NM_001135189,NM_001135188,NM_004504	chr2,chr2,chr2,chr2,chr2	-,+,+,+,+	TM4SF20,AGFG1,AGFG1,AGFG1,AGFG1	-92220,125,125,125,125
chr8:67342310-67342717	chr8	+	67342454	67342748	True	NM_001080416,NM_015169,NM_144650	chr8,chr8,chr8	-,+,+	MYBL1,RRS1,ADHFE1	182783,-1243,1969
chr12:100755145-100755661	chr12	+	100755161	100755415	True	NM_001145288,NM_152317,NM_139319	chr12,chr12,chr12	+,-,+	SLC17A8,DEPDC4,SLC17A8	-4355,-94304,-4355
chr11:1874837-1875221	chr11	+	1874935	1875153	True	NM_002339,NR_036185	chr11,chr11	+,-	LSP1,MIR4298	-786,5663
chrX:71360540-71361120	chrX	+	71360552	71361094	True	NM_207422,NM_001024455	chrX,chrX	+,-	FLJ44635,RGAG4	2939,-8801
chr5:142068313-142069385	chr5	+	142068359	142069262	True	NM_001144935,NM_001135608,NM_033136,NM_000800,NM_001144934,NR_026696,NR_026695	chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,+,-,-,-,-,-	FGF1,ARHGAP26,FGF1,FGF1,FGF1,FGF1,FGF1	8432,81029,-2307,-2706,8432,8432,8432
chr2:74875475-74877396	chr2	+	74875550	74877231	True	NM_138804,NM_004263	chr2,chr2	-,+	C2orf65,SEMA4F	-386,4161
chr4:141074489-141074862	chr4	+	141074531	141074906	True	NM_018717,NM_032547	chr4,chr4	-,+	MAML3,SCOC	377,103533
chr14:64321026-64321233	chr14	+	64321043	64321233	True	NM_182914,NM_015180,NM_030791	chr14,chr14,chr14	+,+,-	SYNE2,SYNE2,SGPP1	-1411,-1411,-126287
chr5:99401992-99402230	chr5	+	99401991	99402107	True	NM_198507,NR_027503	chr5,chr5	+,-	FAM174A,LOC100133050	469016,321901
chr5:99401992-99402230	chr5	+	99715482	99715532	False	NM_198507,NR_027503	chr5,chr5	+,-	FAM174A,LOC100133050	155591,8476
chr5:99401992-99402230	chr5	-	98869850	98869976	False	NM_001270,NR_036530	chr5,chr5	-,+	CHD1,LOC100289230	-607612,-605119
chr4:128558992-128559333	chr4	+	128558996	128559344	True	NM_152778,NM_015693	chr4,chr4	-,+	MFSD8,INTU	327845,-4974
chr6:3898250-3900199	chr6	+	3898434	3900155	True	NM_183373,NM_012135	chr6,chr6	-,+	C6orf145,FAM50B	-146188,-48861
chrX:99851253-99851747	chrX	+	99851358	99851792	True	NM_003270,NM_022144	chrX,chrX	-,+	TSPAN6,TNMD	40058,-11626
chr20:45097216-45097953	chr20	+	45097270	45097986	True	NR_026640,NM_030777	chr20,chr20	-,+	MKRN7P,SLC2A10	-3339,240292
chr16:17565641-17566333	chr16	+	17565688	17566153	True	NR_003569,NM_022166	chr16,chr16	+,-	ABCC6P1,XYLT1	1016416,-950
chr4:57683736-57684544	chr4	+	57684030	57684543	True	NM_021114,NM_005612	chr4,chr4	-,+	SPINK2,REST	3407,89498
chr6:36354912-36355341	chr6	+	36354974	36355356	True	NM_016135,NM_173562	chr6,chr6	-,+	ETV7,KCTD20	161,55187
chr1:152556577-152557663	chr1	+	152556578	152557698	True	NM_178434,NM_032563	chr1,chr1	+,-	LCE3C,LCE3D	15439,-3598
chr1:111989585-111990781	chr1	+	111989699	111990703	True	NM_001688,NM_024102	chr1,chr1	+,-	ATP5F1,WDR77	1039,1185
chr11:1856546-1856956	chr11	+	1856684	1857000	True	NM_001145829,NR_036185,NM_138567,NM_001145841,NM_003282	chr11,chr11,chr11,chr11,chr11	+,-,+,+,+	TNNI2,MIR4298,SYT8,TNNI2,TNNI2	3718,23816,-1061,4431,3232
chr15:93447852-93448507	chr15	+	93447852	93448535	True	NM_001166286,NR_036136,NM_001271,NM_001042572	chr15,chr15,chr15,chr15	-,+,+,+	RGMA,MIR3175,CHD2,CHD2	167904,-274,-4352,-4352
chr19:1521765-1522023	chr19	+	1521770	1522042	True	NR_026557,NM_213604	chr19,chr19	+,-	PLK5P,ADAMTSL5	2035,-8582
chr8:99096405-99096701	chr8	+	99096420	99096617	True	NM_173549,NM_005836	chr8,chr8	+,-	C8orf47,HRSP12	-19721,32852
chr3:52827354-52828284	chr3	+	52827460	52828308	True	NM_003157,NM_002217	chr3,chr3	-,+	NEK4,ITIH3	-22495,475
chr3:18476581-18476923	chr3	+	18476581	18476880	True	NM_002971,NM_001131010,NM_144633,NM_001195470	chr3,chr3,chr3,chr3	-,-,+,-	SATB1,SATB1,KCNH8,SATB1	-9752,3438,713136,-9752
chr14:101455114-101456666	chr14	+	101455208	101456460	True	NR_003213,NR_003224,NR_003223,NR_003222,NR_003221,NR_003220,NR_003214,NR_003218,NR_003219,NR_003215,NR_003216,NM_001134888,NR_003217	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,+,+,+,+,+,+,+,+,-,+	SNORD114-20,SNORD114-31,SNORD114-30,SNORD114-29,SNORD114-28,SNORD114-27,SNORD114-21,SNORD114-25,SNORD114-26,SNORD114-22,SNORD114-23,RTL1,SNORD114-24	-7918,3112,1795,-33,-56,-761,-6947,-2865,-1876,-5996,-5046,-104024,-4145
chr2:98965326-98966594	chr2	+	98965501	98966508	True	NM_001008215,NM_001298,NM_001079878	chr2,chr2,chr2	-,+,+	C2orf64,CNGA3,CNGA3	258497,-2934,-2934
chr3:5225708-5226620	chr3	+	5225768	5226385	True	NM_014674,NR_037903	chr3,chr3	+,-	EDEM1,LOC100507582	2973,-277582
chr11:47600868-47602864	chr11	+	47601203	47602543	True	NM_004551,NR_024222,NM_018095,NM_001164379,NM_016506	chr11,chr11,chr11,chr11,chr11	+,-,-,+,-	NDUFS3,KBTBD4,KBTBD4,FAM180B,KBTBD4	-692,-636,-636,5686,-682
chr2:132921331-132921602	chr2	+	132921413	132921487	True	NM_001508,NR_027019	chr2,chr2	+,-	GPR39,ANKRD30BL	252659,-1888
chr15:38992094-38993663	chr15	+	38992118	38993684	True	NM_005739,NM_207444	chr15,chr15	-,+	RASGRP1,C15orf53	-135111,-3384
chrX:14895756-14896452	chrX	+	14895775	14896499	True	NM_152633,NM_152581,NM_001018113,NM_001177475	chrX,chrX,chrX,chrX	-,+,-,+	FANCB,MOSPD2,FANCB,MOSPD2	-4591,-4301,-4591,6913
chr19:12992505-12992769	chr19	+	12992541	12992601	True	NM_006563,NM_001375,NM_000159,NM_013976	chr19,chr19,chr19,chr19	-,-,+,+	KLF1,DNASE2,GCDH,GCDH	5466,-206,9372,9372
chr19:34174617-34175050	chr19	+	34174656	34175096	True	NM_001166057,NM_022467	chr19,chr19	-,+	PEPD,CHST8	-161857,337
chr3:54963388-54964762	chr3	+	54963519	54964603	True	NM_018398,NM_020678	chr3,chr3	+,-	CACNA2D3,LRTM1	-806878,-1447
chr17:62328940-62330818	chr17	+	62329144	62330445	True	NM_018469,NR_002995	chr17,chr17	-,+	TEX2,SNORA76	10259,-105496
chr22:25423775-25424072	chr22	+	25423817	25424089	True	NM_001001663,NM_001145206	chr22,chr22	-,+	TMEM211,KIAA1671	-88503,-57
chr2:38191371-38193284	chr2	+	38191382	38193289	True	NM_000104,NM_144713	chr2,chr2	-,+	CYP1B1,FAM82A1	110084,-13837
chr18:47816700-47817950	chr18	+	47816927	47817753	True	NM_001204137,NM_001204138,NM_001204139,NM_015844,NM_015847,NM_015846,NM_001204140,NM_001204141,NM_001101654,NM_001204136,NM_001039535,NM_001204143,NM_015845,NM_002384,NM_001204142,NM_014593	chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18	-,-,-,-,-,-,-,-,-,-,+,-,-,-,-,-	MBD1,MBD1,MBD1,MBD1,MBD1,MBD1,MBD1,MBD1,CXXC1,MBD1,SKA1,MBD1,MBD1,MBD1,MBD1,CXXC1	-8783,-8783,-8783,-8783,-8783,-8783,-8783,-8783,-2235,-8783,83638,-8790,-8783,-8783,-8783,-2235
chr2:114461187-114461450	chr2	+	114461277	114461461	True	NM_013412,NM_025181	chr2,chr2	+,-	RABL2A,SLC35F5	-76511,52989
chr22:35590259-35590599	chr22	+	35590284	35590648	True	NM_001003681,NM_005368	chr22,chr22	+,-	HMGXB4,MB	62796,422786
chr4:170528772-170529102	chr4	+	170528959	170529045	True	NM_001199398,NM_001199399,NM_001829,NM_001199397,NM_012224,NM_001199400	chr4,chr4,chr4,chr4,chr4,chr4	-,-,+,-,-,-	NEK1,NEK1,CLCN3,NEK1,NEK1,NEK1	4783,4783,12676,4783,4783,4783
chr19:1094227-1094740	chr19	+	1094264	1094622	True	NM_001039847,NM_002695,NM_002085	chr19,chr19,chr19	+,-,+	GPX4,POLR2E,GPX4	9313,819,9313
chrX:48432154-48432638	chrX	+	48432158	48432614	True	NM_006743,NM_033518	chrX,chrX	+,-	RBM3,SLC38A5	221,-103514
chr15:78633981-78634204	chr15	+	78633985	78634222	True	NM_004378,NM_025234	chr15,chr15	+,-	CRABP1,WDR61	-1370,-42045
chr11:123773562-123775256	chr11	+	123773982	123775235	True	NM_001005197,NM_001013743	chr11,chr11	+,-	OR8D4,TMEM225	1903,-17642
chr1:228327745-228327953	chr1	+	228327751	228327999	True	NM_000858,NM_020435,NM_181465,NM_001159390,NM_001159391	chr1,chr1,chr1,chr1,chr1	+,+,-,+,+	GUK1,GJC2,MRPL55,GUK1,GUK1	-31,9553,-30738,-31,4404
chr11:65778404-65778760	chr11	+	65778403	65778465	True	NM_003860,NM_001143985,NM_001323,NM_032325	chr11,chr11,chr11,chr11	+,+,+,-	BANF1,BANF1,CST6,EIF1AD	-8907,-8907,996,-8825
chr3:183351252-183352674	chr3	+	183351440	183352393	True	NM_130446,NM_017644	chr3,chr3	-,+	KLHL6,KLHL24	-77941,1017
chrX:153640668-153641059	chrX	+	153640689	153641057	True	NM_001009932,NM_001009933,NM_001009934,NM_000116,NM_006730,NM_181313,NM_181312,NM_181311,NR_024048	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,+,-,+,+,+,+	DNASE1L1,DNASE1L1,DNASE1L1,TAZ,DNASE1L1,TAZ,TAZ,TAZ,TAZ	-262,-262,-262,-863,-3114,-863,-863,-863,-863
chr19:49222485-49223065	chr19	+	49222691	49222857	True	NM_001130915,NM_001097638,NM_182574	chr19,chr19,chr19	-,+,-	MAMSTR,FUT2,MAMSTR	169,-23515,-2477
chr2:208998671-209000587	chr2	+	208999221	209000628	True	NM_020989,NM_006891,NM_001178000	chr2,chr2,chr2	-,-,+	CRYGC,CRYGD,PIKFYVE	-4667,-9908,130362
chr5:34001482-34002817	chr5	+	34001523	34002848	True	NM_001167598,NM_001167595,NM_001167597,NM_001167596,NM_014324,NM_016568,NM_203382	chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,-,+,-	AMACR,AMACR,AMACR,AMACR,AMACR,RXFP3,AMACR	5422,5422,5422,5422,5422,-65083,5422
chr2:240115794-240116127	chr2	+	240115803	240116111	True	NR_036229,NR_026664	chr2,chr2	+,-	MIR4269,MGC16025	111045,1092
chr20:50159436-50159824	chr20	+	50159480	50159728	True	NM_173091,NM_014484,NM_012340	chr20,chr20,chr20	-,+,-	NFATC2,MOCS3,NFATC2	-222,-584168,-222
chr4:109680938-109682826	chr4	+	109680944	109682871	True	NM_001146627,NR_027474,NR_027475,NM_021227,NM_001146590,NM_031279	chr4,chr4,chr4,chr4,chr4,chr4	-,-,-,+,-,-	AGXT2L1,AGXT2L1,AGXT2L1,OSTC,AGXT2L1,AGXT2L1	1422,1422,1422,-109254,1422,1422
chr1:35755659-35756064	chr1	+	35755845	35756029	True	NM_005066,NM_005095	chr1,chr1	-,+	SFPQ,ZMYM4	-97102,-21335
chr22:40441734-40442739	chr22	+	40441784	40442553	True	NM_001024843,NM_152512	chr22,chr22	+,-	TNRC6B,ENTHD1	-1014,-151990
chr3:186330802-186331607	chr3	+	186330998	186331500	True	NM_001622,NM_001134415	chr3,chr3	+,-	AHSG,TBCCD1	-199,-42666
chr8:82599873-82600819	chr8	+	82600119	82600624	True	NM_152284,NM_005536,NM_001144879,NM_001144878,NM_001010893	chr8,chr8,chr8,chr8,chr8	+,-,-,-,-	CHMP4C,IMPA1,IMPA1,IMPA1,SLC10A5	44063,-1530,-1530,-1530,6639
chr18:72168278-72168605	chr18	+	72168396	72168596	True	NM_018235,NM_001044369,NM_001168499	chr18,chr18,chr18	+,-,+	CNDP2,FAM69C,CNDP2	-4948,-43893,-1625
chr6:105586544-105588092	chr6	+	105586591	105587727	True	NM_007073,NR_037157,NM_001199563,NM_147147	chr6,chr6,chr6,chr6	-,+,-,-	BVES,C6orf112,BVES,BVES	-2048,-1080,-1542,-2370
chr19:23940152-23941061	chr19	+	23940297	23941046	True	NM_138286,NR_003662	chr19,chr19	-,+	ZNF681,RPSAP58	709,4769
chr5:95169955-95170480	chr5	+	95169956	95170337	True	NR_026936,NM_002064	chr5,chr5	+,-	C5orf27,GLRX	17598,-11379
chr20:57583389-57583711	chr20	+	57583395	57583737	True	NM_001336,NM_030773	chr20,chr20	-,+	CTSZ,TUBB1	-1086,10571
chr2:85788203-85788418	chr2	+	85788203	85788385	True	NM_003761,NM_001142269,NM_000821	chr2,chr2,chr2	+,-,-	VAMP8,GGCX,GGCX	16228,322,322
chr4:77135175-77136872	chr4	+	77135379	77136585	True	NM_005506,NM_001204255,NM_001136570	chr4,chr4,chr4	-,-,+	SCARB2,SCARB2,FAM47E	-327,-327,36267
chr4:6694541-6695807	chr4	+	6694703	6695715	True	NM_005980,NM_203462	chr4,chr4	+,-	S100P,MRFAP1L1	68,15941
chr12:1737530-1738261	chr12	+	1737591	1738201	True	NM_032642,NR_037422	chr12,chr12	+,-	WNT5B,MIR3649	210,31395
chr6:36647047-36647269	chr6	+	36647058	36647182	True	NR_037491,NM_078467,NM_000389,NR_037152,NR_037150,NR_037151	chr6,chr6,chr6,chr6,chr6,chr6	-,+,+,+,+,+	MIR3925,CDKN1A,CDKN1A,CDKN1A,CDKN1A,CDKN1A	-56769,-2842,-653,-2872,-2795,-622
chr19:43967869-43968345	chr19	+	43967901	43968345	True	NM_001130011,NM_014400	chr19,chr19	+,-	TEX101,LYPD3	-48917,1536
chr6:131380010-131380345	chr6	+	131380177	131380259	True	NM_001431,NM_016377,NM_001199388,NM_001135554,NM_001135555	chr6,chr6,chr6,chr6,chr6	-,+,-,-,-	EPB41L2,AKAP7,EPB41L2,EPB41L2,EPB41L2	4257,86201,4211,4257,4211
chr3:41245834-41247239	chr3	+	41245926	41247243	True	NM_001098209,NM_001098210,NM_017886,NM_001904	chr3,chr3,chr3,chr3	+,+,-,+	CTNNB1,CTNNB1,ULK4,CTNNB1	-5042,-5042,756473,-5042
chr22:20002011-20002307	chr22	+	20002010	20002290	True	NM_152906,NM_001670	chr22,chr22	+,-	C22orf25,ARVCF	6340,2069
chr9:35550477-35550792	chr9	+	35550630	35550800	True	NM_001099951,NM_001135999	chr9,chr9	-,+	FAM166B,RUSC2	13146,-12052
chrX:46935021-46936222	chrX	+	46935085	46936254	True	NM_004683,NM_152869,NM_001135998	chrX,chrX,chrX	+,+,-	RGN,RGN,NDUFB11	1520,1520,67891
chr1:220267918-220268539	chr1	+	220267947	220268428	True	NM_006085,NM_018060	chr1,chr1	-,+	BPNT1,IARS2	-4756,-543
chr6:135786187-135787270	chr6	+	135786272	135787298	True	NM_001134830,NR_026805	chr6,chr6	-,+	AHI1,NCRNA00271	31655,31640
chr1:85931591-85932610	chr1	+	85931596	85932448	True	NM_001554,NM_012137	chr1,chr1	+,-	CYR61,DDAH1	113995,-707
chr13:25847956-25849719	chr13	+	25848173	25849230	True	NM_001008564,NM_004685	chr13,chr13	+,-	NUPL1,MTMR6	26435,12524
chr21:40121691-40123038	chr21	+	40121976	40122930	True	NR_027067,NM_005239	chr21,chr21	-,+	NCRNA00114,ETS2	1301,54918
chr14:24549664-24550469	chr14	+	24549702	24550374	True	NM_006177,NM_006032	chr14,chr14	-,+	NRL,CPNE6	3508,-8998
chr12:27616356-27617361	chr12	+	27616488	27617084	True	NM_001145010,NM_001146221	chr12,chr12	+,-	C12orf70,LOC100287284	2658,307175
chr7:112161077-112161409	chr7	+	112161087	112161184	True	NM_182597,NM_022484	chr7,chr7	+,-	C7orf53,TMEM168	-40081,269349
chr11:63954146-63954541	chr11	+	63954151	63954527	True	NM_006819,NM_014067	chr11,chr11	+,-	STIP1,MACROD1	-615,-20566
chr3:75835156-75835787	chr3	+	75835497	75835833	True	NR_036235,NM_001128223	chr3,chr3	+,-	MIR4273,ZNF717	-48126,-1242
chr5:10567629-10567964	chr5	+	10567742	10567977	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-3366,193461
chr11:76468781-76469948	chr11	+	76468887	76469621	True	NM_015516,NR_024042	chr11,chr11	+,-	TSKU,GUCY2E	24663,-36054
chr1:64937235-64937816	chr1	+	64937311	64937861	True	NM_002227,NM_020925	chr1,chr1	-,+	JAK1,CACHD1	494376,-886
chr11:17036539-17037225	chr11	+	17036553	17037087	True	NM_175058,NM_005013	chr11,chr11	-,+	PLEKHA7,NUCB2	-590,261198
chr4:9615398-9617060	chr4	+	9615529	9616937	True	NR_031688,NM_000798	chr4,chr4	-,+	MIR548I2,DRD5	-57592,166320
chr4:9615398-9617060	chr4	-	4023730	4025134	False	NM_000683,NR_024253	chr4,chr4	+,-	ADRA2C,LOC348926	-255495,-66582
chr17:7251911-7252785	chr17	+	7252118	7252656	True	NM_032442,NM_198154,NM_001002914	chr17,chr17,chr17	-,+,+	NEURL4,TMEM95,KCTD11	-19480,5840,2551
chr3:138763100-138763305	chr3	+	138763102	138763236	True	NM_001134657,NR_026783	chr3,chr3	-,+	PRR23C,BPESC1	548,59790
chr10:51947097-51948734	chr10	+	51947112	51948783	True	NM_018232,NM_001143974	chr10,chr10	+,-	FAM21B,ASAH2	-109277,59650
chr10:51947097-51948734	chr10	+	48001821	48002896	False	NM_018232,NM_002900	chr10,chr10	+,-	FAM21B,RBP3	-107849,388152
chr10:51947097-51948734	chr10	-	52513510	52514462	False	NM_147156,NM_001079516	chr10,chr10	-,+	SGMS1,ASAH2B	-129773,-13853
chr2:98330380-98331495	chr2	+	98330932	98331518	True	NM_001079,NM_005735	chr2,chr2	+,-	ZAP70,ACTR1B	-952,-50371
chr1:24236744-24236998	chr1	+	24236752	24236910	True	NM_001841,NM_017761	chr1,chr1	-,+	CNR2,PNRC2	2967,49390
chr2:85979017-85979224	chr2	+	85979087	85979261	True	NM_198843,NM_032827	chr2,chr2	-,+	SFTPB,ATOH8	-83223,1647
chr5:149339856-149340104	chr5	+	149339882	149340150	True	NM_000112,NM_000440	chr5,chr5	+,-	SLC26A2,PDE6A	149,-15526
chr20:62589007-62589244	chr20	+	62589086	62589292	True	NM_017859,NM_001193379,NR_027287	chr20,chr20,chr20	-,-,+	UCKL1,UCKL1,UCKL1-AS1	-1286,-6559,-4400
chr9:128024559-128025650	chr9	+	128024597	128025467	True	NM_005347,NM_015635	chr9,chr9	-,+	HSPA5,GAPVD1	-20931,-537
chr9:114938115-114938342	chr9	+	114938143	114938391	True	NM_022486,NM_001195822	chr9,chr9	-,+	SUSD1,HSDL2	-587,203797
chr6:160221557-160222055	chr6	+	160221690	160221996	True	NM_173516,NM_030752	chr6,chr6	+,-	PNLDC1,TCP1	-440,-10955
chr17:19266433-19266996	chr17	+	19266536	19266956	True	NM_015681,NM_139032	chr17,chr17	-,+	B9D1,MAPK7	-490,14077
chr11:133823681-133824131	chr11	+	133823685	133824157	True	NM_014987,NR_027276	chr11,chr11	-,+	IGSF9B,LOC100128239	2773,78009
chr13:52027820-52028522	chr13	+	52028034	52028480	True	NM_001039937,NM_012141,NM_001101320,NM_001039938	chr13,chr13,chr13,chr13	-,-,+,-	INTS6,INTS6,SERPINE3,INTS6	-759,-759,-112924,-759
chr5:138679564-138681407	chr5	+	138679958	138681184	True	NM_016480,NM_001033112,NM_005847	chr5,chr5,chr5	+,+,-	PAIP2,PAIP2,SLC23A1	-2490,-1875,37912
chr3:151588029-151589063	chr3	+	151588115	151589112	True	NM_033050,NR_027037	chr3,chr3	+,-	SUCNR1,LOC401093	2318,398353
chr10:104180280-104180522	chr10	+	104180294	104180478	True	NM_024326,NM_002779	chr10,chr10	+,-	FBXL15,PSD	-776,-1393
chr16:11681878-11682282	chr16	+	11681930	11682048	True	NM_003498,NM_004862,NR_024320,NM_001136472,NM_001136473	chr16,chr16,chr16,chr16,chr16	+,-,-,-,-	SNN,LITAF,LITAF,LITAF,LITAF	80240,-1701,-608,-1124,-1124
chrX:15284980-15285237	chrX	+	15285078	15285218	True	NM_024087,NM_203281,NM_001031739,NM_001168530,NM_001168531	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	ASB9,BMX,ASB9,ASB9,ASB9	3131,233681,3131,3131,3427
chr6:36214272-36214961	chr6	+	36214271	36214961	True	NM_001010903,NM_001145716,NM_173676	chr6,chr6,chr6	-,+,+	C6orf222,PNPLA1,PNPLA1	89751,-3342,-3377
chr16:71880207-71880526	chr16	+	71880327	71880539	True	NM_001201553,NM_001137675,NR_024612	chr16,chr16,chr16	-,+,+	ZNF821,ATXN1L,ATXN1L	36955,-479,-479
chr18:499462-499803	chr18	+	499484	499818	True	NM_130386,NM_004066	chr18,chr18	-,+	COLEC12,CETN1	961,80550
chr22:35541381-35542703	chr22	+	35541521	35542599	True	NM_001008494,NM_005368	chr22,chr22	+,-	ISX,MB	-79442,470835
chr3:169757419-169758368	chr3	+	169757718	169758407	True	NM_014373,NR_024409	chr3,chr3	+,-	GPR160,LOC100128164	-2041,-73196
chr1:38509239-38509817	chr1	+	38509335	38509823	True	NM_016037,NM_002699	chr1,chr1	+,-	UTP11L,POU3F1	-31002,2677
chr22:37091116-37092255	chr22	+	37091437	37092039	True	NM_006078,NM_000631	chr22,chr22	-,+	CACNG2,NCF4	6701,164990
chr3:134203992-134204296	chr3	+	134204075	134204277	True	NM_025180,NM_001042400,NM_001042384,NM_015391,NM_001042383,NR_024400,NR_024401	chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,-,+,-,-	CEP63,CEP63,CEP63,ANAPC13,CEP63,ANAPC13,ANAPC13	769,619,297,636,297,638,604
chr17:38079464-38081184	chr17	+	38079723	38080925	True	NM_139280,NM_001042471,NM_018530,NM_001165959,NM_001165958,NM_001195545	chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,+	ORMDL3,GSDMB,GSDMB,GSDMB,GSDMB,LOC100505591	3009,-4820,-5930,-4820,-4820,16801
chr1:48429511-48430432	chr1	+	48429514	48430400	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	32218,257956
chr17:57782239-57782600	chr17	+	57782459	57782639	True	NM_030938,NM_016077	chr17,chr17	+,-	VMP1,PTRH2	2223,2269
chr9:135854220-135854435	chr9	+	135854219	135854483	True	NM_001135031,NM_001162427,NM_004188	chr9,chr9,chr9	+,-,+	GFI1B,TSC1,GFI1B	-172,-34199,-172
chr12:117319888-117320960	chr12	+	117320099	117321001	True	NM_003806,NM_012174	chr12,chr12	-,+	HRK,FBXW8	-867,27759
chr3:128721201-128722112	chr3	+	128721456	128722138	True	NM_020741,NM_024768	chr3,chr3	-,+	KIAA1257,CCDC48	-8470,-1035
chr14:36298306-36299857	chr14	+	36298790	36299226	True	NM_194301,NM_032352	chr14,chr14	-,+	RALGAPA1,BRMS1L	-20358,-3244
chr9:37788044-37788319	chr9	+	37788045	37788286	True	NM_016042,NM_001002269,NM_024345	chr9,chr9,chr9	-,-,+	EXOSC3,EXOSC3,DCAF10	-2980,-2978,12503
chrX:136650108-136650420	chrX	+	136650139	136650459	True	NM_054021,NM_003413	chrX,chrX	-,+	GPR101,ZIC3	-536306,-1844
chr11:89387522-89388095	chr11	+	89387522	89388148	True	NM_153696,NM_001143837	chr11,chr11	+,-	FOLH1B,NOX4	4316,-64743
chr11:89387522-89388095	chr11	-	49211962	49212368	False	NM_001014986,NR_027044	chr11,chr11	-,+	FOLH1,LOC440040	17917,367711
chr18:45439890-45440368	chr18	+	45440006	45440411	True	NM_005901,NM_001142397	chr18,chr18	-,+	SMAD2,CTIF	16568,625015
chr19:33621920-33622842	chr19	+	33622259	33622635	True	NM_173479,NM_033103	chr19,chr19	+,-	WDR88,RHPN2	362,-66435
chr12:1100307-1100601	chr12	+	1100546	1100608	True	NM_134424,NR_027946,NM_178039,NR_027948,NR_027949,NM_178040	chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,+,+,+	RAD52,ERC1,ERC1,ERC1,ERC1,ERC1	-41683,-193,-193,-193,-193,-193
chr9:19237310-19238239	chr9	+	19237646	19238034	True	NR_038064,NM_017925	chr9,chr9	-,+	PLIN2,DENND4C	-110042,52714
chr11:86081596-86082118	chr11	+	86081734	86082005	True	NM_001014811,NM_001156474,NM_021827	chr11,chr11,chr11	-,+,+	ME3,CCDC81,CCDC81	301286,3772,3772
chr7:66767601-66767811	chr7	+	66767665	66767837	True	NM_022906,NR_022007	chr7,chr7	+,-	STAG3L4,PMS2P4	-100,-259
chr6:138187297-138187850	chr6	+	138187302	138187862	True	NM_006290,NM_022121	chr6,chr6	+,-	TNFAIP3,PERP	718,240848
chr19:45541241-45541451	chr19	+	45541246	45541456	True	NM_145288,NM_007056	chr19,chr19	-,+	ZNF296,CLASRP	38282,841
chr15:45113841-45114629	chr15	+	45114172	45114628	True	NM_182985,NM_001145112	chr15,chr15	+,-	TRIM69,PATL2	-85663,-145086
chr7:135243508-135244647	chr7	+	135243530	135244085	True	NM_015135,NM_001190848	chr7,chr7	+,-	NUP205,CNOT4	-920,-48655
chr1:219650734-219651061	chr1	+	219650762	219651112	True	NM_138794,NM_018713	chr1,chr1	+,-	LYPLAL1,SLC30A10	-303621,450938
chr14:102606967-102607356	chr14	+	102607141	102607373	True	NM_144574,NM_181308,NM_181302,NM_181291,NM_001017963	chr14,chr14,chr14,chr14,chr14	+,+,+,+,-	WDR20,WDR20,WDR20,WDR20,HSP90AA1	-980,-980,-980,-980,-1055
chr17:41006094-41006558	chr17	+	41006137	41006329	True	NM_001158,NM_003734,NM_009590,NM_003766	chr17,chr17,chr17,chr17	+,+,+,-	AOC2,AOC3,AOC2,BECN1	-9579,-2987,-9579,-29827
chrX:3257600-3257994	chrX	+	3257777	3257954	True	NM_004042,NM_015419	chrX,chrX	+,-	ARSF,MXRA5	-272988,6793
chr3:12043604-12044409	chr3	+	12043777	12044419	True	NM_138807,NM_133625,NM_003178	chr3,chr3,chr3	-,+,+	C3orf31,SYN2,SYN2	-155425,1442,1442
chr1:92349799-92350912	chr1	+	92349982	92350878	True	NM_207189,NM_003243,NR_036634,NM_001195683	chr1,chr1,chr1,chr1	+,-,-,-	BRDT,TGFBR3,TGFBR3,TGFBR3	64049,1008,1008,1008
chr8:134309254-134309503	chr8	+	134309428	134309538	True	NM_001135242,NR_037944,NM_006096	chr8,chr8,chr8	-,+,-	NDRG1,WISP1,NDRG1	59,-106197,59
chr7:65970100-65970454	chr7	+	65970199	65970409	True	NM_001167961,NR_002933	chr7,chr7	+,-	KCTD7,LOC493754	123458,73139
chr11:20621107-20621459	chr11	+	20621155	20621487	True	NM_001029865,NM_004211	chr11,chr11	-,+	DBX1,SLC6A5	-439285,-260
chr4:141680296-141682085	chr4	+	141680324	141682133	True	NM_015130,NM_153702	chr4,chr4	-,+	TBC1D9,ELMOD2	-2853,-235063
chr19:17959080-17959751	chr19	+	17959099	17959799	True	NR_001593,NM_000215	chr19,chr19	+,-	RPL18AP3,JAK3	10927,-258
chr2:175624562-175626336	chr2	+	175624579	175626379	True	NM_024583,NM_000079,NM_001039523	chr2,chr2,chr2	+,-,-	SCRN3,CHRNA1,CHRNA1	-364173,2871,2871
chr21:15547166-15548219	chr21	+	15547182	15548222	True	NM_144770,NM_198996	chr21,chr21	+,-	RBM11,LIPI	40243,31082
chr15:43402024-43403412	chr15	+	43402024	43403189	True	NM_024956,NM_174916	chr15,chr15	+,-	TMEM62,UBR1	22532,-3738
chr3:112206151-112207160	chr3	+	112206470	112207012	True	NM_017945,NM_001085357	chr3,chr3	+,-	SLC35A5,BTLA	73882,11448
chr17:72769622-72770780	chr17	+	72769844	72770357	True	NM_015654,NM_017728	chr17,chr17	-,+	NAT9,TMEM104	2170,2264
chr11:15731503-15732979	chr11	+	15731505	15732631	True	NM_001145819,NM_001042536	chr11,chr11	-,+	SOX6,INSC	691832,-595079
chrX:38218967-38219261	chrX	+	38219002	38219152	True	NM_001034853,NM_000531	chrX,chrX	-,+	RPGR,OTC	-32214,-7324
chr10:76995887-76996460	chr10	+	76996035	76996503	True	NM_144589,NR_033675	chr10,chr10	-,+	COMTD1,VDAC2	-265,-25794
chr12:115122852-115123169	chr12	+	115122852	115123130	True	NM_138432,NM_016569,NM_005996	chr12,chr12,chr12	+,-,-	SDSL,TBX3,TBX3	-1262687,-883,-883
chr16:16325584-16326077	chr16	+	16325607	16326122	True	NM_001171,NM_001079528,NM_001004067	chr16,chr16,chr16	-,-,+	ABCC6,ABCC6,NOMO3	-8279,-8279,266
chr16:16325584-16326077	chr16	-	18573762	18574289	False	NM_001004060,NM_173614,NR_003569	chr16,chr16,chr16	-,-,+	NOMO2,NOMO2,ABCC6P1	-328,-328,8280
chr16:16325584-16326077	chr16	+	14926772	14927308	False	NR_023387,NM_014287	chr16,chr16	-,+	ABCC6P2,NOMO1	-8213,334
chr12:50619493-50620544	chr12	+	50619617	50620249	True	NM_032901,NM_001113547,NR_031625	chr12,chr12,chr12	+,-,-	C12orf62,LIMA1,MIR1293	-113779,-3129,7798
chr3:178274283-178275128	chr3	+	178274558	178275073	True	NM_022470,NM_005832	chr3,chr3	-,+	ZMAT3,KCNMB2	514642,1544
chr7:14030781-14031020	chr7	+	14030818	14031063	True	NM_001163150,NM_004956,NM_001163151,NM_001163147,NM_005738,NM_001163152,NM_001163148,NM_001163149	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,+,-,-,-	ETV1,ETV1,ETV1,ETV1,ARL4A,ETV1,ETV1,ETV1	-4679,-1176,-4679,-1176,-1303958,-4679,37,47
chr15:55698153-55698742	chr15	+	55698365	55698614	True	NM_020739,NM_001198784,NM_001204451,NM_004748,NM_001204450	chr15,chr15,chr15,chr15,chr15	-,+,-,-,-	CCPG1,FLJ27352,CCPG1,CCPG1,CCPG1	2150,2108,2150,2016,2150
chr16:736056-736354	chr16	+	736061	736307	True	NM_032259,NM_005861,NM_001005920	chr16,chr16,chr16	-,+,-	WDR24,STUB1,JMJD8	4143,-5997,-1622
chr15:42448263-42448604	chr15	+	42448267	42448651	True	NM_198141,NM_213600,NR_033151	chr15,chr15,chr15	+,-,-	GANC,PLA2G4F,PLA2G4F	117714,238,238
chr1:13359647-13360328	chr1	+	13360085	13360149	True	NM_001013692,NM_001010889,NM_001013407	chr1,chr1,chr1	-,+,+	PRAMEF3,PRAMEF6,PRAMEF5	-28393,-311,-325
chr1:13359647-13360328	chr1	-	13007089	13007153	False	NM_001100631,NM_001010889	chr1,chr1	+,-	PRAMEF22,PRAMEF6	28389,311
chr1:13359647-13360328	chr1	-	13117420	13117484	False	NM_001100631,NM_001013407	chr1,chr1	+,-	PRAMEF22,PRAMEF5	-81934,325
chrX:134657249-134658779	chrX	+	134657537	134658829	True	NM_007131,NM_182540	chrX,chrX	-,+	ZNF75D,DDX26B	-227572,-3042
chr16:89895519-89895917	chr16	+	89895644	89895897	True	NM_032451,NM_001018112	chr16,chr16	+,-	SPIRE2,FANCA	-788,-12579
chr3:167372403-167373225	chr3	+	167372727	167373273	True	NM_178824,NM_001122752	chr3,chr3	-,+	WDR49,SERPINI1	-1438,80158
chr2:40688043-40688602	chr2	+	40688055	40688648	True	NM_152390,NM_021097	chr2,chr2	+,-	TMEM178,SLC8A1	-795083,-30611
chr1:182305063-182306562	chr1	+	182305107	182306337	True	NR_034131,NM_001033056	chr1,chr1	+,-	NCRNA00272,GLUL	70418,54252
chr11:67572816-67573278	chr11	+	67572921	67573297	True	NM_007103,NR_024249	chr11,chr11	+,-	NDUFV1,LOC645332	-198649,-114
chr9:93401564-93401858	chr9	+	93401564	93401858	True	NM_017594,NM_001135052	chr9,chr9	-,+	DIRAS2,SYK	3300,162153
chr1:117541981-117542796	chr1	+	117542005	117542666	True	NM_001145635,NM_004258	chr1,chr1	-,+	TRIM45,CD101	121795,1715
chr8:100025662-100026435	chr8	+	100025790	100026175	True	NM_015243,NM_152564,NM_006281,NM_017890,NM_181661	chr8,chr8,chr8,chr8,chr8	+,+,-,+,+	VPS13B,VPS13B,STK3,VPS13B,VPS13B	-347,-347,-187881,-347,-347
chr19:12941229-12943217	chr19	+	12941958	12943170	True	NM_001080997,NM_014975,NM_031429	chr19,chr19,chr19	-,+,-	RTBDN,MAST1,RTBDN	-751,6088,3110
chr2:122406935-122407143	chr2	+	122406940	122407189	True	NR_037856,NR_037858,NM_001142274,NR_037857,NM_015282,NM_001142273	chr2,chr2,chr2,chr2,chr2,chr2	+,+,-,+,-,-	LOC254128,LOC254128,CLASP1,LOC254128,CLASP1,CLASP1	375,40,-69,40,-69,-69
chr14:105646468-105647049	chr14	+	105646491	105647031	True	NM_177533,NM_033271	chr14,chr14	-,+	NUDT14,BTBD6	679,67847
chr17:3512473-3513230	chr17	+	3512494	3512940	True	NM_080704,NM_001031681	chr17,chr17	-,+	TRPV1,CTNS	-65,26821
chr12:48123257-48123670	chr12	+	48123301	48123703	True	NM_001172439,NM_006025,NM_001172440,NM_017842	chr12,chr12,chr12,chr12	-,-,-,+	ENDOU,ENDOU,ENDOU,SLC48A1	-3946,-3946,-3946,43263
chr16:69599231-69599444	chr16	+	69599331	69599425	True	NM_173214,NR_031719,NM_001113178,NM_006599,NM_138714,NM_138713	chr16,chr16,chr16,chr16,chr16,chr16	+,-,+,+,+,+	NFAT5,MIR1538,NFAT5,NFAT5,NFAT5,NFAT5	-387,400,-387,-387,-387,-387
chr1:238051237-238052777	chr1	+	238051343	238052345	True	NR_027247,NM_021186	chr1,chr1	+,-	LOC100130331,ZP4	-25920,1927
chr16:70097517-70098166	chr16	+	70097640	70098061	True	NR_036265,NR_003610	chr16,chr16	+,-	MIR1972-2,PDXDC2P	-33451,1853
chr19:17139684-17140636	chr19	+	17139757	17140467	True	NM_001130065,NM_015692	chr19,chr19	+,-	MYO9B,CPAMD8	46123,-2132
chr6:90528072-90528450	chr6	+	90528138	90528198	True	NM_001137667,NM_014611	chr6,chr6	+,-	CASP8AP2,MDN1	11420,1294
chr19:46978282-46978718	chr19	+	46978478	46978594	True	NM_018215,NM_001103149,NM_005184	chr19,chr19,chr19	-,-,+	PNMAL1,PNMAL1,CALM3	-3658,-3658,125917
chr3:128997053-128997556	chr3	+	128997077	128997519	True	NM_006026,NM_001006109,NM_020187	chr3,chr3,chr3	-,+,+	H1FX,C3orf37,C3orf37	37651,297,164
chr20:29523211-29524184	chr20	+	29523240	29524121	True	NM_001037731,NR_003579	chr20,chr20	-,+	DEFB116,FRG1B	372317,87757
chr21:31659132-31660457	chr21	+	31659269	31660470	True	NM_181599,NM_001085455,NM_001128598	chr21,chr21,chr21	+,-,-	KRTAP13-1,KRTAP24-1,KRTAP25-1	107921,-3993,1419
chr4:84404591-84405208	chr4	+	84404957	84405044	True	NM_139076,NM_016067	chr4,chr4	-,+	FAM175A,MRPS18C	1301,-27890
chr15:60690412-60690717	chr15	+	60690468	60690719	True	NM_012182,NM_001002858,NM_004039,NM_001002857,NM_001136015	chr15,chr15,chr15,chr15,chr15	+,-,-,-,-	FOXB1,ANXA2,ANXA2,ANXA2,ANXA2	-394098,-283,-283,-283,-283
chr12:48355896-48356302	chr12	+	48355989	48356343	True	NM_001143841,NM_001844,NM_001143843,NM_001143842,NM_024056	chr12,chr12,chr12,chr12,chr12	+,-,+,+,+	TMEM106C,COL2A1,TMEM106C,TMEM106C,TMEM106C	986,41992,986,986,986
chr11:50378491-50379445	chr11	+	50378623	50379459	True	NR_024504,NR_003034	chr11,chr11	+,-	LOC646813,LOC441601	-10356,-120990
chr1:91871746-91872269	chr1	+	91871850	91872316	True	NM_001134419,NM_001017975	chr1,chr1	+,-	CDC7,HFM1	94087,-1424
chr2:58688823-58689116	chr5	-	140031369	140031700	False	NM_002488,NR_037428,NM_006083,NR_033697,NM_001185012	chr5,chr5,chr5,chr5,chr5	-,+,+,-,-	NDUFA2,MIR3655,IK,NDUFA2,NDUFA2	-3999,-4272,-4317,-3999,-3999
chr2:58688823-58689116	chr2	+	58688919	58689166	True	NR_033873,NM_018062	chr2,chr2	+,-	FLJ30838,FANCL	58721,-220404
chr19:46404726-46404989	chr19	+	46404761	46405009	True	NM_004497,NM_001012643	chr19,chr19	+,-	FOXA3,MYPOP	-37294,903
chr19:55988318-55988983	chr19	+	55988415	55988836	True	NM_024710,NM_020378,NM_033113	chr19,chr19,chr19	-,+,+	ISOC2,NAT14,ZNF628	-15366,7720,-767
chr10:13042595-13043105	chr10	+	13042670	13043053	True	NM_031455,NM_001008211	chr10,chr10	-,+	CCDC3,OPTN	701,99028
chr5:90679024-90679284	chr5	+	90679024	90679308	True	NM_020801,NR_027435	chr5,chr5	-,+	ARRDC3,LOC100129716	11,-2920
chr20:23498070-23498824	chr20	+	23498086	23498693	True	NM_080610,NR_001279	chr20,chr20	-,+	CST9L,CSTT	50750,1089
chr17:61779847-61780887	chr17	+	61779907	61780797	True	NM_007372,NM_030576	chr17,chr17	+,-	DDX42,LIMD2	70769,-2388
chr1:171079976-171080355	chr1	+	171079987	171080394	True	NR_031627,NM_006894	chr1,chr1	-,+	MIR1295,FMO3	-9040,-20020
chr4:82064693-82065356	chr4	+	82064807	82065375	True	NM_006259,NM_001201	chr4,chr4	-,+	PRKG2,BMP3	60890,-112754
chr12:79526329-79527575	chr12	+	79526488	79527576	True	NM_001135806,NM_002583	chr12,chr12	+,-	SYT1,PAWR	-87113,557278
chr3:14717492-14718850	chr3	+	14717520	14718719	True	NM_001184957,NM_001080423,NM_001184958,NM_032137	chr3,chr3,chr3,chr3	+,-,+,+	C3orf20,GRIP2,C3orf20,C3orf20	-972,-133932,-972,-972
chr5:55515023-55515858	chr5	+	55515170	55515800	True	NM_024669,NM_139017	chr5,chr5	-,+	ANKRD55,IL31RA	13436,-367895
chr3:124449795-124450070	chr3	+	124450056	124450118	True	NM_002213,NR_033437,NR_033434,NM_000373	chr3,chr3,chr3,chr3	-,+,+,+	ITGB5,UMPS,UMPS,UMPS	156076,-894,-894,-894
chr19:47634718-47635048	chr19	+	47634742	47634958	True	NM_015168,NR_027280,NM_001145713,NM_005500,NM_001145714	chr19,chr19,chr19,chr19,chr19	-,+,+,+,+	ZC3H4,SAE1,SAE1,SAE1,SAE1	-17733,-678,-713,-713,-713
chr1:16170235-16171143	chr1	+	16170368	16171037	True	NR_024279,NM_015001	chr1,chr1	-,+	FLJ37453,SPEN	3668,3321
chr1:35250671-35251343	chr1	+	35250696	35251364	True	NM_001164824,NM_024009,NM_001005752,NM_002060	chr1,chr1,chr1,chr1	-,+,+,+	C1orf212,GJB3,GJB3,GJA4	73332,-3957,-2836,7234
chr1:225614844-225615049	chr1	+	225614856	225615088	True	NM_194442,NM_002296,NM_001130440	chr1,chr1,chr1	-,-,+	LBR,LBR,SRP9	1519,777,350426
chr12:65583156-65583889	chr12	+	65583155	65583799	True	NM_007191,NM_014319	chr12,chr12	-,+	WIF1,LEMD3	-67809,-19855
chr6:7107828-7108068	chr6	+	7107942	7108010	True	NM_001003700,NM_001003699,NM_001003698,NM_001168344,NM_003144	chr6,chr6,chr6,chr6,chr6	+,+,+,+,-	RREB1,RREB1,RREB1,RREB1,SSR1	75,75,75,-163,205581
chr13:28026223-28026799	chr13	+	28026263	28026846	True	NM_002097,NM_152912,NM_001166261,NM_001166262,NM_001166263	chr13,chr13,chr13,chr13,chr13	+,-,-,-,-	GTF3A,MTIF3,MTIF3,MTIF3,MTIF3	-27633,-1524,-1929,-1937,-1524
chr5:134913234-134913914	chr5	+	134913407	134913903	True	NM_004887,NM_145282	chr5,chr5	-,+	CXCL14,SLC25A48	1116,256461
chr14:39572690-39573528	chr14	+	39572756	39573391	True	NM_006364,NM_001009182	chr14,chr14	-,+	SEC23A,SIP1	-319,10096
chr14:24773778-24775524	chr14	+	24773888	24775300	True	NM_001164692,NM_174913,NM_019839,NM_138452,NM_001136050,NM_001143919,NM_181657,NM_014430	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,-,-,+,+,-	LTB4R2,C14orf21,LTB4R2,DHRS1,DHRS1,LTB4R,LTB4R,CIDEB	4056,-4842,4056,-5222,-4849,5404,7012,5326
chr5:1553348-1553747	chr5	+	1553398	1553780	True	NM_024830,NM_004553	chr5,chr5	-,+	LPCAT1,NDUFS6	-29322,247715
chr12:94940687-94941844	chr12	+	94940689	94941811	True	NM_016122,NR_027035	chr12,chr12	-,+	CCDC41,LOC144486	-86925,-86964
chr19:3762793-3763520	chr19	+	3762977	3763500	True	NM_004886,NM_172251,NM_032753	chr19,chr19,chr19	-,+,-	APBA3,MRPL54,RAX2	-1304,-363,8770
chr18:3377160-3378730	chr18	+	3377793	3378615	True	NM_019856,NM_174886	chr18,chr18	-,+	MYOM1,TGIF1	-157687,33456
chr19:42388612-42388824	chr19	+	42388678	42388750	True	NM_198977,NM_001783,NM_021601,NM_004706,NM_199002,NM_173506	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,-	ARHGEF1,CD79A,CD79A,ARHGEF1,ARHGEF1,LYPD4	-1462,-7539,-7539,-1462,-283,-40170
chr12:123459625-123459914	chr12	+	123459635	123459903	True	NM_203444,NM_024623,NM_018694,NM_001002251,NM_001002252,NM_019625,NM_019624,NM_016638	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,+,+,-,-,+	ABCB9,OGFOD2,ARL6IP4,ARL6IP4,ARL6IP4,ABCB9,ABCB9,ARL6IP4	-3,-332,4976,4976,4976,-8579,-8579,4976
chr9:35650013-35650508	chr9	+	35650081	35650492	True	NM_014450,NM_001195201,NM_001195200,NR_003051,NM_001195217,NM_174923	chr9,chr9,chr9,chr9,chr9,chr9	-,+,+,-,+,+	SIT1,CCDC107,CCDC107,RMRP,CCDC107,CCDC107	505,7794,7794,7573,7794,7794
chr5:140595438-140595714	chr5	+	140595493	140595761	True	NM_018934,NM_018932,NM_018933,NM_031947	chr5,chr5,chr5,chr5	+,+,+,-	PCDHB14,PCDHB12,PCDHB13,SLC25A2	7316,-7253,-2035,87901
chr5:140595438-140595714	chr5	+	140531630	140531708	False	NR_001280,NM_031947,NM_018939	chr5,chr5,chr5	+,-,+	PCDHB17,SLC25A2,PCDHB6	3871,151954,-1842
chr11:63994543-63995432	chr11	+	63994699	63995323	True	NM_031472,NM_001160389,NM_001033678,NM_032344,NM_005528,NM_003377,NM_001160392,NM_001160393,NM_001160390,NM_001128613,NM_001128612	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,+,+,+,-,-,-,+,+	TRPT1,TRPT1,TRPT1,NUDT22,DNAJC4,VEGFB,TRPT1,TRPT1,TRPT1,NUDT22,NUDT22	-973,-973,-973,-1012,2429,6942,-973,-1358,-973,-1012,-1012
chrY:15814656-15814952	chrY	+	15814655	15814839	True	NM_182660,NM_004202	chrY,chrY	-,+	UTY,TMSB4Y	-222105,607
chr7:105222697-105223117	chr7	+	105222728	105223134	True	NR_027068,NM_021930	chr7,chr7	-,+	EFCAB10,RINT1	-752,-50247
chr13:45699283-45699731	chr13	+	45699325	45699413	True	NM_004128,NM_198404	chr13,chr13	+,-	GTF2F2,KCTD4	-4750,75820
chr4:174253417-174254703	chr4	+	174253536	174254720	True	NM_003864,NM_001130689,NM_001130688,NM_002129	chr4,chr4,chr4,chr4	+,-,-,-	SAP30,HMGB2,HMGB2,HMGB2	37372,250,839,925
chrX:62969354-62970248	chrX	+	62969414	62970142	True	NM_015185,NM_001010888,NM_001173480	chrX,chrX,chrX	-,+,-	ARHGEF9,ZC3H12B,ARHGEF9	4939,1738472,4939
chr15:25452370-25452705	chr15	+	25452377	25452735	True	NR_003315,NR_003314,NR_003313,NR_003312,NR_003311,NR_003310,NR_022010,NR_003495,NR_003308,NR_003309,NM_130838,NR_003342,NR_003307	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,+,-,+,+	SNORD115-23,SNORD115-22,SNORD115-21,SNORD115-20,SNORD115-19,SNORD115-18,PAR4,SNORD115-24,SNORD115-16,SNORD115-17,UBE3A,SNORD115-25,SNORD115-15	4207,2329,-1019,-1019,-2924,-2924,4103,6070,-7833,-2924,197968,7952,-1019
chr7:111848352-111848894	chr7	+	111848592	111848731	True	NM_021994,NM_014705	chr7,chr7	+,-	ZNF277,DOCK4	-2006,-2130
chr17:60882341-60882849	chr17	+	60882349	60882894	True	NM_001100875,NM_152598,NR_036146	chr17,chr17,chr17	-,-,+	MARCH10,MARCH10,MIR548W	1168,2862,-83542
chr1:153963242-153963507	chr1	+	153963250	153963402	True	NM_002870,NM_001030	chr1,chr1	-,+	RAB13,RPS27	-4444,-62
chr19:6991020-6991540	chr19	+	6991143	6991310	True	NR_024075,NM_001136507	chr19,chr19	-,+	EMR4P,MBD3L5	-286,39283
chr20:46616576-46617454	chr20	+	46616632	46617423	True	NR_026958,NM_198596	chr20,chr20	+,-	LOC284749,SULF2	371230,-201272
chr10:74111367-74113176	chr10	+	74111538	74113108	True	NM_019058,NM_017626,NM_001002762	chr10,chr10,chr10	+,-,-	DDIT4,DNAJB12,DNAJB12	-77912,1849,1849
chr20:3715477-3716406	chr20	+	3715707	3716061	True	NM_052970,NM_001197327,NM_023068	chr20,chr20,chr20	+,+,-	HSPA12B,HSPA12B,SIGLEC1	-2450,-2450,-27932
chr14:94854395-94854687	chr14	+	94854452	94854736	True	NM_001127704,NM_001127705,NM_001127706,NM_001127707,NM_001127700,NM_001127701,NM_001127702,NM_001127703,NM_006215,NM_001002236,NM_001002235,NM_000295	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	-,-,-,-,-,-,-,-,+,-,-,-	SERPINA1,SERPINA1,SERPINA1,SERPINA1,SERPINA1,SERPINA1,SERPINA1,SERPINA1,SERPINA4,SERPINA1,SERPINA1,SERPINA1	2343,2343,2343,2343,2343,2343,2343,2343,173046,2343,2343,467
chr19:1479272-1479546	chr19	+	1479304	1479526	True	NM_138393,NM_152482	chr19,chr19	+,-	REEP6,C19orf25	11638,-76
chr8:27942685-27943470	chr8	+	27942921	27943287	True	NM_018091,NM_001010906	chr8,chr8	+,-	ELP3,C8orf80	7296,-1533
chr6:26191187-26192162	chr6	+	26191357	26192107	True	NM_021065,NM_003522,NM_003530,NM_003523,NM_003539	chr6,chr6,chr6,chr6,chr6	-,+,-,+,-	HIST1H2AD,HIST1H2BF,HIST1H3D,HIST1H2BE,HIST1H4D	7414,7679,7407,-7389,-2053
chr11:65082399-65082674	chr11	+	65082400	65082562	True	NM_001077241,NM_006779	chr11,chr11	-,+	SLC25A45,CDC42EP2	67630,-120
chr7:35078095-35078673	chr7	+	35078149	35078684	True	NM_015283,NM_207173	chr7,chr7	-,+	DPY19L1,NPSR1	-496,-380303
chr2:74753356-74754117	chr2	+	74753415	74754111	True	NM_133637,NM_181575,NM_145074,NM_013247	chr2,chr2,chr2,chr2	-,-,+,+	DQX1,AUP1,HTRA2,HTRA2	-7,2913,2420,2420
chr7:135239738-135240747	chr7	+	135239900	135240288	True	NM_015135,NM_001190848	chr7,chr7	+,-	NUP205,CNOT4	2373,-45025
chr13:52419381-52420254	chr13	+	52419495	52420090	True	NR_027047,NR_027048,NM_031290	chr13,chr13,chr13	-,-,+	NCRNA00282,NCRNA00282,CCDC70	-209,-209,16026
chr17:7554340-7554679	chr17	+	7554344	7554416	True	NM_001678,NM_133491	chr17,chr17	+,-	ATP1B2,SAT2	-141,-23150
chr1:1847504-1847857	chr1	+	1847527	1847805	True	NM_138705,NM_178545	chr1,chr1	+,-	CALML6,TMEM52	-1312,2985
chr19:19028852-19029337	chr19	+	19029088	19029206	True	NM_019070,NM_199444,NR_033677,NM_199442,NM_007263	chr19,chr19,chr19,chr19,chr19	+,-,+,-,-	DDX49,COPE,DDX49,COPE,COPE	1277,1043,1277,1043,1043
chr14:21161299-21161854	chr14	+	21161413	21161883	True	NM_001097577,NM_002937,NM_001145,NM_194431,NM_001001968	chr14,chr14,chr14,chr14,chr14	+,+,+,+,-	ANG,RNASE4,ANG,RNASE4,OR6S1	-4543,-9103,-9139,-4543,-51563
chr9:75528753-75530691	chr9	+	75528758	75530606	True	NM_000700,NM_000689	chr9,chr9	+,-	ANXA1,ALDH1A1	236174,37684
chr10:7661652-7661865	chr10	+	7661811	7661871	True	NM_002216,NM_032817	chr10,chr10	+,-	ITIH2,ITIH5	83364,-175
chr5:53821380-53821852	chr5	+	53821379	53821813	True	NM_052870,NM_001145427,NM_019087,NM_001102575	chr5,chr5,chr5,chr5	+,+,-,+	SNX18,SNX18,ARL15,SNX18	-7843,-7847,-214976,-7843
chr12:89918843-89919060	chr12	+	89918843	89919049	True	NR_037660,NM_172240,NM_001199781,NR_037659,NM_001199782,NR_028138,NM_003774,NM_001199777	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,-,-,-,-,+,-,-	POC1B,POC1B,POC1B-GALNT4,POC1B,POC1B-GALNT4,LOC338758,GALNT4,POC1B	345,1040,1040,1040,1040,183682,-260,345
chr7:130126450-130126725	chr7	+	130126453	130126745	True	NR_029899,NR_004382,NM_177525,NM_177524,NM_002402	chr7,chr7,chr7,chr7,chr7	+,-,+,+,+	MIR335,MESTIT1,MEST,MEST,MEST	9206,4318,4427,-458,5192
chr4:109087100-109087628	chr4	+	109087227	109087645	True	NM_001130714,NM_001130713,NM_001166119,NM_016269,NR_029374,NR_029373	chr4,chr4,chr4,chr4,chr4,chr4	-,-,-,-,+,+	LEF1,LEF1,LEF1,LEF1,LOC641518,LOC641518	2517,2517,358,2517,1035,5630
chr14:76832745-76832965	chr14	+	76832757	76832939	True	NM_004452,NM_003239	chr14,chr14	+,-	ESRRB,TGFB3	4750,-384665
chr11:17496118-17497475	chr11	+	17496153	17497436	True	NM_000352,NM_001202439	chr11,chr11	-,+	ABCC8,DKFZp686O24166	1063,-122895
chr10:101686809-101687139	chr10	+	101686940	101687078	True	NR_024130,NM_015221	chr10,chr10	+,-	DNMBP-AS1,DNMBP	-28,82648
chr11:129243771-129243997	chr11	+	129243932	129244036	True	NM_001142685,NM_003658	chr11,chr11	-,+	ARHGAP32,BARX2	-181839,1844
chr11:10472726-10473036	chr11	+	10472821	10473031	True	NM_001025390,NM_001025389,NM_000480,NM_001172430,NM_001172431,NM_001190702	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,-	AMPD3,AMPD3,AMPD3,AMPD3,AMPD3,MTRNR2L8	4449,3634,-648,9646,-1004,57742
chr1:120582302-120583586	chr1	+	120582695	120583292	True	NM_024408,NM_001100910	chr1,chr1	-,+	NOTCH2,FAM72B	29076,255712
chr1:120582302-120583586	chr1	-	145238139	145238736	False	NM_203458,NM_022359	chr1,chr1	+,-	NOTCH2NL,PDE4DIP	-29080,-161953
chr15:40403155-40405016	chr15	+	40403383	40405058	True	NM_001003943,NM_001003942,NM_001003940,NM_001211,NM_033503	chr15,chr15,chr15,chr15,chr15	-,-,-,+,-	BMF,BMF,BMF,BUB1B,BMF	-5096,-5096,-2308,48151,-4744
chr8:21899809-21900541	chr8	+	21899864	21900518	True	NM_024815,NM_003867	chr8,chr8	-,+	NUDT18,FGF17	66464,-91
chr2:73502310-73503460	chr2	+	73502603	73502833	True	NR_029403,NM_001080410	chr2,chr2	+,-	CCT7,FBXO41	-41292,-5845
chr14:94391043-94392159	chr14	+	94391179	94392157	True	NM_138344,NR_027004	chr14,chr14	+,-	FAM181A,C14orf86	-5973,611
chr20:43152900-43154818	chr20	+	43152992	43154867	True	NM_198941,NM_007066,NM_006811,NM_181805,NM_181804	chr20,chr20,chr20,chr20,chr20	-,+,-,+,+	SERINC3,PKIG,SERINC3,PKIG,PKIG	-2266,5568,-2266,5568,5568
chr18:77160726-77161018	chr18	+	77160994	77161054	True	NM_006162,NM_172388,NM_172389,NM_172387,NM_001146343,NM_172390	chr18,chr18,chr18,chr18,chr18,chr18	+,+,+,+,-,+	NFATC1,NFATC1,NFATC1,NFATC1,PQLC1,NFATC1	-5273,-5273,-719,-719,550649,-5273
chr11:68747609-68748044	chr11	+	68747638	68747996	True	NM_139075,NM_198923	chr11,chr11	+,-	TPCN2,MRGPRD	68353,509
chr4:100069571-100070396	chr4	+	100069683	100070186	True	NM_000670,NR_037884	chr4,chr4	-,+	ADH4,LOC100507053	-4234,-59727
chr8:53620313-53620796	chr8	+	53620312	53620742	True	NM_014781,NM_001083617,NM_005285	chr8,chr8,chr8	-,-,+	RB1CC1,RB1CC1,NPBWR1	6340,6340,231725
chr3:50390039-50391692	chr3	+	50390176	50391464	True	NM_015896,NM_007022,NM_007024,NM_006545	chr3,chr3,chr3,chr3	-,+,-,-	ZMYND10,CYB561D2,TMEM115,NPRL2	-7020,-1930,5525,-1690
chr1:29452353-29452843	chr1	+	29452433	29452850	True	NM_001003682,NM_001195001,NM_001171868	chr1,chr1,chr1	-,+,-	TMEM200B,PTPRU,TMEM200B	-2012,110177,-3420
chr12:56913070-56913333	chr12	+	56913069	56913153	True	NM_013267,NM_002898	chr12,chr12	-,+	GLS2,RBMS2	-30888,2455
chr1:90003189-90004370	chr1	+	90003431	90004175	True	NR_033981,NM_001134476	chr1,chr1	-,+	FLJ27354,LRRC8B	94330,-13085
chr10:15128161-15129495	chr10	+	15128339	15129465	True	NM_183005,NM_001097590,NM_006414,NM_001039844,NM_153244	chr10,chr10,chr10,chr10,chr10	+,+,+,-,-	RPP38,RPP38,RPP38,ACBD7,C10orf111	9716,9716,9716,1367,9910
chr1:159894601-159894875	chr1	+	159894647	159894833	True	NM_003564,NM_020125	chr1,chr1	-,+	TAGLN2,SLAMF8	501,-98219
chr16:69362895-69363156	chr16	+	69362913	69363133	True	NM_022341,NM_001199434	chr16,chr16	-,+	PDF,NIP7	1415,10281
chr1:220263005-220263998	chr1	+	220263007	220263633	True	NM_018060,NM_006085	chr1,chr1	+,-	IARS2,BPNT1	3821,-30
chr17:77069611-77070345	chr17	+	77069793	77070247	True	NM_138793,NM_001042573	chr17,chr17	-,+	CANT1,ENGASE	-63894,771
chrX:48457158-48457369	chrX	+	48457283	48457349	True	NM_001166426,NM_017883,NM_033518,NR_029427	chrX,chrX,chrX,chrX	+,+,-,+	WDR13,WDR13,SLC38A5,WDR13	-1110,-1454,-128639,-1454
chr12:132853772-132854002	chr12	+	132853777	132854041	True	NM_001122636,NR_024563	chr12,chr12	-,+	GALNT9,LOC100130238	51914,-1851
chr3:43327360-43327794	chr3	+	43327412	43327822	True	NM_017719,NM_032806,NM_001100594	chr3,chr3,chr3	+,-,+	SNRK,C3orf39,SNRK	181,-179847,181
chr19:49560800-49561106	chr19	+	49560830	49561150	True	NM_033183,NM_006179,NM_033043,NM_033142	chr19,chr19,chr19,chr19	-,-,+,-	CGB8,NTF4,CGB5,CGB7	-8462,6024,-13779,-1833
chr12:120965644-120966461	chr12	+	120966087	120966309	True	NM_014868,NM_032314	chr12,chr12	+,-	RNF10,COQ5	5822,705
chr9:34627441-34627667	chr9	+	34627494	34627716	True	NM_000155,NM_001017363,NM_024348,NM_007234	chr9,chr9,chr9,chr9	+,-,-,-	GALT,ARID3C,DCTN3,DCTN3	18918,345,-6998,-6998
chr12:56094833-56095085	chr12	+	56094854	56095130	True	NM_001144996,NM_002206,NM_001487	chr12,chr12,chr12	-,-,+	ITGA7,ITGA7,BLOC1S1	6606,6606,14687
chr17:19879269-19879650	chr17	+	19879292	19879495	True	NM_007202,NM_152904	chr17,chr17	-,+	AKAP10,SPECC1	1691,110839
chr10:106134005-106135192	chr10	+	106134240	106134967	True	NM_001008723,NM_033397	chr10,chr10	+,-	CCDC147,ITPRIP	-20778,-40577
chrX:64719904-64720398	chrX	+	64719968	64720294	True	NM_001010888,NM_001170649	chrX,chrX	+,-	ZC3H12B,LAS1L	-11411,34448
chr18:33651642-33652602	chr18	+	33652123	33652601	True	NM_018170,NM_018255	chr18,chr18	-,+	RPRD1A,ELP2	-4750,57285
chr16:71495622-71495958	chr16	+	71495683	71495829	True	NM_145911,NM_005769	chr16,chr16	-,+	ZNF23,CHST4	338,64193
chr6:10412352-10412642	chr6	+	10412352	10412620	True	NM_001042425,NM_001032280,NM_003220,NR_033910	chr6,chr6,chr6,chr6	-,-,-,+	TFAP2A,TFAP2A,TFAP2A,LOC100130275	7227,37,2900,-1
chr1:109931000-109932447	chr1	+	109931152	109932399	True	NM_001040709,NM_002959,NM_001205228	chr1,chr1,chr1	+,-,-	SYPL2,SORT1,SORT1	76700,8217,3633
chr21:47602700-47604313	chr21	+	47602817	47604351	True	NR_002776,NM_001142854,NM_032261	chr21,chr21,chr21	+,-,-	MCM3AP-AS1,C21orf56,C21orf56	44806,72,72
chr20:36930294-36931803	chr20	+	36930356	36931731	True	NM_001725,NM_001029864	chr20,chr20	+,-	BPI,KIAA1755	820,-41182
chr1:28879667-28879931	chr1	+	28879673	28879936	True	NM_017846,NR_003109,NR_003077	chr1,chr1,chr1	+,+,-	TRNAU1AP,TRNAU1AP,SNORD99	-195,-195,25448
chr3:16938546-16939626	chr3	+	16938604	16939544	True	NM_001144382,NM_001351	chr3,chr3	+,-	PLCL2,DAZL	-12203,-291598
chr19:984331-984817	chr19	+	984397	984553	True	NM_024100,NM_001033026	chr19,chr19	+,-	WDR18,C19orf6	-120,36638
chr1:146688732-146690259	chr1	+	146688892	146690298	True	NM_001144830,NM_001461,NM_004284,NM_001144829	chr1,chr1,chr1,chr1	-,-,+,-	FMO5,FMO5,CHD1L,FMO5	6990,6990,23992,6990
chr19:12551707-12552025	chr19	+	12551723	12552039	True	NM_153358,NM_005815	chr19,chr19	+,-	ZNF791,ZNF443	169692,49
chr2:12857485-12857913	chr2	+	12857507	12857938	True	NR_027303,NM_021643,NR_036226	chr2,chr2,chr2	+,+,-	TRIB2,TRIB2,MIR4262	-560,-560,-880395
chr10:96830109-96830310	chr10	+	96830205	96830331	True	NM_000770,NM_001198855,NM_207321,NM_001198854,NM_001198853	chr10,chr10,chr10,chr10,chr10	-,-,+,-,-	CYP2C8,CYP2C8,C10orf129,CYP2C8,CYP2C8	-951,-951,123625,-951,-951
chr19:53325483-53326557	chr19	+	53325876	53326406	True	NR_036599,NR_036600,NM_152473,NM_006969	chr19,chr19,chr19,chr19	-,-,+,-	ZNF28,ZNF28,HERV-V1,ZNF28	-954,-954,190937,-954
chr14:59101964-59103554	chr14	+	59102332	59103484	True	NM_016651,NM_012460,NM_001079520	chr14,chr14,chr14	+,-,+	DACT1,TIMM9,DACT1	1272,-208100,1272
chr8:38326371-38326612	chr8	+	38326422	38326622	True	NM_001174065,NM_001174064,NM_015850,NM_001174066,NM_001174063,NM_023110,NM_023105,NM_001174067,NM_023106,NM_001199660	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,-,-,-,-,-,+	FGFR1,FGFR1,FGFR1,FGFR1,FGFR1,FGFR1,FGFR1,FGFR1,FGFR1,LETM2	-1059,-70,-70,-1059,-70,-70,-70,-1059,-70,-81824
chr12:6835622-6836990	chr12	+	6835941	6837002	True	NM_005439,NM_001164095,NM_001164094,NM_001164093,NM_016319,NM_153685	chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,+,+,-	MLF2,COPS7A,COPS7A,COPS7A,COPS7A,C12orf53	25130,-2753,-2848,-2549,-2818,-26129
chr16:29804682-29806190	chr16	+	29804813	29805863	True	NM_175900,NM_007317	chr16,chr16	-,+	C16orf54,KIF22	-47473,-2808
chr20:25603791-25604136	chr20	+	25603878	25604048	True	NM_021067,NM_152667	chr20,chr20	+,-	GINS1,NANP	-215606,650
chr1:36395846-36396389	chr1	+	36395979	36396276	True	NM_024852,NM_022111,NM_177422	chr1,chr1,chr1	+,-,+	EIF2C3,CLSPN,EIF2C3	406,-160428,406
chr3:178985553-178986118	chr3	+	178985875	178986134	True	NM_016331,NR_028135,NM_171829,NM_171828,NM_001163677	chr3,chr3,chr3,chr3,chr3	+,-,-,-,-	ZNF639,KCNMB3,KCNMB3,KCNMB3,KCNMB3	55416,-8196,-8196,-1037,-1037
chrX:18986230-18986432	chrX	+	18986419	18986494	True	NM_000292,NR_029379	chrX,chrX	-,+	PHKA2,LOC100132163	16049,-78069
chr3:39228425-39228794	chr3	+	39228442	39228776	True	NM_145755,NM_001198621,NM_194293	chr3,chr3,chr3	+,-,-	TTC21A,XIRP1,XIRP1	-79341,5359,5351
chr4:103654090-103654600	chr4	+	103654146	103654511	True	NM_001008388,NM_005908	chr4,chr4	+,-	CISD2,MANBA	135623,27697
chr1:203448169-203449003	chr1	+	203448252	203448967	True	NM_002023,NM_201348,NM_002725	chr1,chr1,chr1	-,+,+	FMOD,PRELP,PRELP	-127963,-3420,-3420
chrX:141295329-141295785	chrX	+	141295364	141295782	True	NM_005462,NM_016249	chrX,chrX	+,-	MAGEC1,MAGEC2	-303773,-2288
chr5:122372095-122372310	chr5	+	122372095	122372343	True	NM_001136239,NM_000943	chr5,chr5	+,-	PRDM6,PPIC	52497,132
chr16:1842553-1842796	chr16	+	1842617	1842841	True	NM_001146006,NR_027389,NM_012225,NM_004970	chr16,chr16,chr16,chr16	-,-,+,-	IGFALS,IGFALS,NUBP2,IGFALS	943,2118,-9735,943
chr11:118548797-118549231	chr11	+	118548818	118549071	True	NM_001144759,NM_007180	chr11,chr11	+,-	PHLDB1,TREH	-70563,1367
chr22:29830762-29831543	chr22	+	29830882	29831591	True	NR_002727,NM_021026	chr22,chr22	-,+	RFPL1S,RFPL1	6584,2980
chr19:6430870-6432114	chr19	+	6431392	6431996	True	NM_139161,NM_003685,NM_173637	chr19,chr19,chr19	+,-,-	CRB3,KHSRP,SLC25A41	32263,-6570,1844
chr6:48020957-48021421	chr6	+	48021169	48021471	True	NR_033806,NM_001013732	chr6,chr6	+,-	OPN5,C6orf138	-266428,15005
chr21:44588926-44589268	chr21	+	44589032	44589316	True	NM_006758,NM_000394	chr21,chr21	-,+	U2AF1,CRYAA	-61344,20
chr11:76959538-76959925	chr11	+	76959539	76959756	True	NM_182833,NM_001127180	chr11,chr11	-,+	GDPD4,MYO7A	38768,-120284
chr2:101032381-101033397	chr2	+	101032528	101033390	True	NM_004854,NM_001011717	chr2,chr2	-,+	CHST10,NMS	790,53553
chr19:54022857-54023287	chr19	+	54022880	54023258	True	NM_018555,NR_002938	chr19,chr19	+,-	ZNF331,LOC284379	918,83543
chr16:226886-227117	chr16	+	226952	227132	True	NM_001077350,NM_000558,NM_000517,NM_005331	chr16,chr16,chr16,chr16	-,+,+,+	NPRL3,HBA1,HBA2,HBQ1	-38280,-324,-4157,3200
chr16:226886-227117	chr16	+	223148	223328	False	NM_001077350,NM_000558,NM_000517,NM_001003938,NM_005331	chr16,chr16,chr16,chr16,chr16	-,+,+,+,+	NPRL3,HBA1,HBA2,HBM,HBQ1	-34476,3350,-353,-7226,7004
chr5:154241802-154243248	chr5	+	154242260	154243295	True	NM_032385,NM_004779	chr5,chr5	-,+	C5orf4,CNOT8	-12047,-4113
chr12:25801520-25802425	chr12	+	25801543	25802120	True	NM_001164748,NM_001145727	chr12,chr12	+,-	RASSF8,IFLTD1	309843,-55
chr1:24528024-24528961	chr1	+	24528219	24528999	True	NM_173065,NR_027087	chr1,chr1	-,+	IL28RA,LOC284632	-14454,-1540
chr8:8089493-8090441	chr8	+	8089592	8090028	True	NR_024361,NR_031689,NR_024363,NR_024362	chr8,chr8,chr8,chr8	+,-,+,+	FLJ10661,MIR548I3,FLJ10661,FLJ10661	-3551,-142981,-3551,-3551
chr21:45073422-45074860	chr21	+	45073536	45074882	True	NM_015056,NM_007031	chr21,chr21	+,-	RRP1B,HSF2BP	4549,4542
chr9:96715975-96716258	chr9	+	96715975	96716169	True	NM_177995,NM_021570	chr9,chr9	+,-	PTPDC1,BARX1	76906,1489
chr4:107210847-107211425	chr4	+	107210989	107211329	True	NM_001142415,NM_001163435	chr4,chr4	+,-	AIMP1,TBCK	25437,26153
chr5:138720154-138720501	chr5	+	138720199	138720429	True	NM_001033112,NM_016459,NM_005847,NM_152685	chr5,chr5,chr5,chr5	+,-,-,-	PAIP2,MZB1,SLC23A1,SLC23A1	-42116,5226,-1160,-1160
chr3:186284123-186284871	chr3	+	186284128	186284758	True	NM_016306,NM_001134415,NM_018138	chr3,chr3,chr3	+,-,-	DNAJB11,TBCCD1,TBCCD1	3708,3624,433
chrX:49091457-49091795	chrX	+	49091527	49091787	True	NM_005183,NM_014008	chrX,chrX	-,+	CACNA1F,CCDC22	-1694,139
chrX:12809468-12809750	chrX	+	12809493	12809743	True	NM_001039091,NR_030727,NM_002765	chrX,chrX,chrX	+,-,+	PRPS2,LOC349408,PRPS2	-70,151726,-70
chr17:21538394-21538935	chr17	+	21538573	21538737	True	NM_001113434,NM_001194958	chr17,chr17	-,+	C17orf51,KCNJ18	-83632,-230183
chr5:32712313-32712668	chr5	+	32712384	32712634	True	NM_001204376,NM_000908,NM_001204375,NM_016107	chr5,chr5,chr5,chr5	+,+,+,-	NPR3,NPR3,NPR3,ZFR	-1692,-997,-997,-267540
chr2:97933465-97934199	chr2	+	97933506	97934188	True	NM_199336,NM_001164315	chr2,chr2	-,+	FAHD2B,ANKRD36	-172924,-154324
chr2:97933465-97934199	chr2	-	98105089	98105771	False	NM_025190,NM_001862	chr2,chr2	-,+	ANKRD36B,COX5B	100707,156749
chr15:75745227-75746109	chr15	+	75745257	75746057	True	NM_001145357,NM_015477,NM_024608,NM_001145358	chr15,chr15,chr15,chr15	-,-,+,-	SIN3A,SIN3A,NEIL1,SIN3A	2117,-1331,-105977,-1170
chr2:227665217-227665826	chr2	+	227665341	227665792	True	NM_001167608,NM_005544	chr2,chr2	+,-	RHBDD1,IRS1	34878,-1835
chr6:144375878-144377411	chr6	+	144376103	144377290	True	NM_001080951,NM_001080955,NM_003764	chr6,chr6,chr6	-,-,+	PLAGL1,PLAGL1,STX11	8504,8504,94363
chr11:47428834-47429627	chr11	+	47428886	47429410	True	NM_002804,NM_001128225,NM_152264	chr11,chr11,chr11	-,+,+	PSMC3,SLC39A13,SLC39A13	18666,635,635
chr16:68057086-68057291	chr16	+	68057094	68057272	True	NM_017803,NM_018380	chr16,chr16	+,-	DUS2L,DDX28	31,548
chr18:56988749-56990346	chr18	+	56988788	56990272	True	NM_181654,NM_002091	chr18,chr18	-,+	CPLX4,GRP	-2907,-101447
chr11:76469948-76471457	chr11	+	76470043	76471501	True	NM_015516,NR_024042	chr11,chr11	+,-	TSKU,GUCY2E	22783,-37210
chr1:226946929-226948141	chr1	+	226947176	226947998	True	NM_002221,NM_000447	chr1,chr1	-,+	ITPKB,PSEN2	-20300,110274
chr10:74034234-74035295	chr10	+	74034337	74035278	True	NM_001198800,NM_019058	chr10,chr10	-,+	ASCC1,DDIT4	-58154,-711
chr2:209025271-209025632	chr2	+	209025504	209025576	True	NM_014617,NM_001178000	chr2,chr2	-,+	CRYGA,PIKFYVE	2771,105414
chr11:22759008-22759299	chr11	+	22759014	22759348	True	NM_005256,NM_148893	chr11,chr11	+,-	GAS2,SVIP	-62747,92084
chr11:71952511-71952831	chr11	+	71952729	71952819	True	NM_005169,NM_001567	chr11,chr11	-,+	PHOX2A,INPPL1	2451,-16898
chr3:49942766-49943663	chr3	+	49942918	49943704	True	NM_001167582,NM_002447	chr3,chr3	+,-	RBM6,MST1R	33772,-1612
chr17:43566159-43566359	chr17_ctg5_hap1	+	181392	181468	False	NM_014798,NR_027774,NR_027782,NM_001113738	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	-,-,-,+	PLEKHM1,PLEKHM1,PLEKHM1,ARL17A	1796,1796,1796,14252
chr17:43566159-43566359	chr17	+	43566324	43566400	True	NR_037772,NM_014798,NR_027774,NR_027782	chr17,chr17,chr17,chr17	+,-,-,-	CRHR1,PLEKHM1,PLEKHM1,PLEKHM1	131309,1796,1796,1796
chr17:43566159-43566359	chr17	+	62831479	62831555	False	NR_024386,NM_001165933	chr17,chr17	-,+	PLEKHM1P,RGS9	1797,301900
chr9:101896140-101896922	chr9	+	101896520	101896956	True	NM_004612,NM_033087	chr9,chr9	+,-	TGFBR1,ALG2	-29173,87340
chr13:72440485-72440686	chr13	+	72440584	72440666	True	NM_004392,NM_080760,NM_024808,NM_080759	chr13,chr13,chr13,chr13	-,-,+,-	DACH1,DACH1,C13orf34,DACH1	714,714,861375,714
chr16:12012857-12014465	chr16	+	12012883	12014113	True	NM_001192,NM_002094,NM_001130007,NM_001130006	chr16,chr16,chr16,chr16	+,-,-,-	TNFRSF17,GSPT1,GSPT1,GSPT1	44850,-3058,-2364,-3058
chr9:97353998-97354947	chr9	+	97354001	97354579	True	NM_003837,NM_001193331	chr9,chr9	-,+	FBP2,C9orf3	1546,134371
chr14:104389755-104391475	chr14	+	104389970	104391336	True	NM_001127393,NM_153046,NM_004894	chr14,chr14,chr14	-,+,-	C14orf2,TDRD9,C14orf2	-2067,3480,-2067
chr8:99439866-99440193	chr8	+	99440054	99440242	True	NM_024759,NM_020697	chr8,chr8	-,+	NIPAL2,KCNS2	-133433,-855
chr6:127623703-127625420	chr6	+	127623975	127625320	True	NM_030963,NM_001139510	chr6,chr6	+,-	RNF146,ECHDC1	-36019,38282
chr1:214774910-214775947	chr1	+	214775038	214775989	True	NM_016343,NM_005401	chr1,chr1	+,-	CENPF,PTPN14	542,-50014
chrX:24329852-24330068	chrX	+	24329919	24330115	True	NM_001136233,NM_001136234	chrX,chrX	-,+	FAM48B2,FAM48B1	1367,50762
chrX:24329852-24330068	chrX	-	24382268	24382318	False	NM_001136233,NM_001136234	chrX,chrX	-,+	FAM48B2,FAM48B1	-50836,-1441
chr20:32262388-32262750	chr20	+	32262447	32262607	True	NM_031231,NM_031232,NM_001024675	chr20,chr20,chr20	-,-,+	NECAB3,NECAB3,C20orf134	-183,-183,-8194
chr8:495998-496290	chr8	+	496047	496201	True	NM_175075,NM_183421	chr8,chr8	-,+	C8orf42,FBXO25	-716,-139290
chr9:98279034-98279289	chr9	+	98279042	98279253	True	NM_001010895,NM_001083607,NM_001083602,NM_001083603,NM_001083604,NM_001083605,NM_001083606,NM_000264	chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9	+,-,-,-,-,-,-,-	C9orf102,PTCH1,PTCH1,PTCH1,PTCH1,PTCH1,PTCH1,PTCH1	358646,-9561,44,44,-8720,-8720,-9343,-8211
chrX:3263969-3264339	chrX	+	3264160	3264379	True	NM_004042,NM_015419	chrX,chrX	+,-	ARSF,MXRA5	-279371,356
chr2:129074778-129075073	chr2	+	129074930	129075098	True	NM_004807,NR_027671	chr2,chr2	-,+	HS6ST1,UGGT1	1123,-226199
chr16:23521896-23522149	chr16	+	23521900	23521974	True	NM_019116,NM_015044	chr16,chr16	+,-	UBFD1,GGA2	46887,-85
chr19:50015707-50015963	chr19	+	50015711	50015930	True	NM_004107,NM_001136019,NR_029703	chr19,chr19,chr19	+,+,-	FCGRT,FCGRT,MIR150	505,-226,-11586
chr14:63511326-63511897	chr14	+	63511375	63511863	True	NM_172375,NM_139318,NM_020663	chr14,chr14,chr14	-,-,+	KCNH5,KCNH5,RHOJ	142,142,159281
chr3:193854355-193854628	chr3	+	193854399	193854643	True	NR_033944,NM_005524	chr3,chr3	-,+	LOC647323,HES1	-132951,-532
chr2:27806058-27806424	chr2	+	27806060	27806385	True	NM_032266,NM_001142683,NM_032434	chr2,chr2,chr2	+,-,+	C2orf16,CCDC121,ZNF512	-6722,45411,-218
chr2:198701093-198701630	chr2	+	198701199	198701583	True	NM_006226,NM_197970	chr2,chr2	+,-	PLCL1,BOLL	-31831,-50261
chr12:40019947-40020158	chr12	+	40019994	40020146	True	NM_001031748,NM_005164	chr12,chr12	+,-	C12orf40,ABCD2	-73,-6151
chr1:83616503-83616851	chr7	-	76212953	76213264	False	NR_029411,NM_012230	chr7,chr7	+,-	LOC100133091,POMZP3	-34346,43406
chr1:83616503-83616851	chr1	+	83616531	83616841	True	NM_207578,NM_024686	chr1,chr1	+,-	PRKACB,TTLL7	926903,848042
chr7:128165048-128165395	chr7	+	128165381	128165443	True	NM_183243,NM_018396	chr7,chr7	-,+	IMPDH1,METTL2B	-115345,-48649
chr16:16665709-16666679	chr16	+	16665833	16666619	True	NR_036447,NM_001079528	chr16,chr16	+,-	PKD1P1,ABCC6	-254418,-348505
chr16:16665709-16666679	chr16	-	18792332	18792872	False	NM_001030009,NM_001019,NM_024847	chr16,chr16,chr16	-,-,+	RPS15A,RPS15A,TMC7	8834,8834,202383
chr9:115819319-115819535	chr9	+	115819322	115819578	True	NM_003408,NR_024366	chr9,chr9	-,+	ZFP37,NCRNA00256A	-326,55597
chr5:133860485-133860695	chr5	+	133860589	133860662	True	NM_001033503,NM_015288	chr5,chr5	-,+	SAR1B,PHF15	107922,1135
chr8:133111968-133112937	chr8	+	133112193	133112928	True	NM_015137,NM_001145095	chr8,chr8	+,-	EFR3A,HHLA1	-195897,4635
chr20:15178765-15179809	chr20	+	15179282	15179730	True	NR_037841,NM_001033087	chr20,chr20	-,+	NCRNA00186,MACROD2	-269121,-1836
chr11:64068687-64069089	chr11	+	64068686	64068748	True	NM_004451,NM_001039496,NM_016404,NM_033310	chr11,chr11,chr11,chr11	+,+,-,+	ESRRA,C11orf20,TRMT112,KCNK4	4295,-874,16335,-9944
chr19:38881900-38883031	chr19	+	38882037	38883075	True	NM_001042522,NM_001039616,NM_152657	chr19,chr19,chr19	+,+,-	SPRED3,SPRED3,GGN	-1156,-1156,-3369
chr4:140224873-140225365	chr4	+	140224941	140225409	True	NM_001184987,NM_001184986,NM_001184990,NM_001184991,NM_001184989,NM_001184988,NM_057175,NM_002494	chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4	-,-,-,-,-,-,+,-	NDUFC1,NDUFC1,NDUFC1,NDUFC1,NDUFC1,NDUFC1,NAA15,NDUFC1	-1236,-2577,-1236,-2577,-1236,-1236,-2326,-2553
chr6:34357837-34358428	chr6	+	34358087	34358201	True	NM_006703,NM_020804	chr6,chr6	-,+	NUDT3,PACSIN1	2318,75651
chr7:6688123-6688323	chr7	+	6688137	6688321	True	NM_017560,NM_006956	chr7,chr7	+,-	ZNF853,ZNF12	-32661,58295
chr8:68660981-68662108	chr8	+	68661067	68661908	True	NM_020361,NM_025170	chr8,chr8	-,+	CPA6,PREX2	-2447,202694
chr3:72497430-72497997	chr3	+	72497575	72497872	True	NM_001080393,NM_012234	chr3,chr3	+,-	GXYLT2,RYBP	439512,-1801
chr9:36383480-36385466	chr9	+	36383519	36385290	True	NM_022781,NM_014791	chr9,chr9	-,+	RNF38,MELK	15057,187614
chr4:5020339-5020557	chr4	+	5020367	5020495	True	NM_018659,NM_018401	chr4,chr4	-,+	CYTL1,STK32B	752,33031
chr12:133065153-133066000	chr12	+	133065397	133065795	True	NM_001142641,NM_001195520	chr12,chr12	+,-	FBRSL1,LOC645277	1361,121292
chr2:234261091-234261299	chr2	+	234261162	234261344	True	NM_018218,NM_152879	chr2,chr2	-,+	USP40,DGKD	212942,1808
chr19:11038420-11038788	chr19	+	11038601	11038835	True	NM_024029,NM_138358	chr19,chr19	-,+	YIPF2,C19orf52	572,588
chr22:41939547-41939922	chr22	+	41939741	41939897	True	NM_001018050,NM_001018052,NM_014460,NM_138338	chr22,chr22,chr22,chr22	-,-,+,-	POLR3H,POLR3H,CSDC2,POLR3H	632,632,17116,629
chr12:21381768-21383423	chr12	+	21381796	21382972	True	NM_021094,NM_006446	chr12,chr12	-,+	SLCO1A2,SLCO1B1	104917,-97719
chr15:92937308-92937550	chr15	+	92937346	92937412	True	NM_006011,NR_021493	chr15,chr15	+,-	ST8SIA2,LOC100144604	-260,178131
chr22:44318844-44319241	chr22	+	44318948	44319292	True	NM_025225,NM_138814	chr22,chr22	+,-	PNPLA3,PNPLA5	326,-31055
chr7:65969419-65970040	chr7	+	65969432	65969956	True	NM_001167961,NR_002933	chr7,chr7	+,-	KCTD7,LOC493754	123911,73592
chr1:228594710-228595004	chr1	+	228594963	228595049	True	NM_001024940,NM_175055,NM_001134855,NM_145214,NM_016102	chr1,chr1,chr1,chr1,chr1	-,+,-,-,-	TRIM17,HIST3H2BB,TRIM17,TRIM11,TRIM17	9584,50758,9584,-446,9584
chr2:196933811-196934287	chr2	+	196933883	196934313	True	NM_020342,NM_018897	chr2,chr2	+,-	SLC39A10,DNAH7	-412082,-347
chr22:23746093-23747622	chr22	+	23746138	23747496	True	NR_033408,NR_003950	chr22,chr22	+,-	FBXW4P1,ZDHHC8P1	-141235,-1339
chr19:6282806-6283986	chr19	+	6282966	6283752	True	NM_006012,NM_005934	chr19,chr19	+,-	CLPP,MLLT1	77710,-3007
chr15:57517596-57518969	chr15	+	57517981	57519019	True	NM_207040,NR_015419	chr15,chr15	+,-	TCF12,LOC145783	-6387,-307284
chr20:48184524-48184730	chr20	+	48184554	48184656	True	NM_015266,NM_000961	chr20,chr20	+,-	SLC9A8,PTGIS	244593,101
chr16:57126106-57126331	chr16	+	57126122	57126294	True	NM_152727,NM_024946	chr16,chr16	+,-	CPNE2,FAM192A	160,93732
chr6:137356004-137357256	chr6	+	137356480	137357243	True	NM_014432,NM_001008783	chr6,chr6	-,+	IL20RA,SLC35D3	9106,-113131
chr1:148193307-148193566	chr1	+	148193414	148193556	True	NM_001164262,NM_001170755,NM_001164261	chr1,chr1,chr1	-,+,-	PPIAL4F,NBPF15,PPIAL4D	9030,364631,9030
chr22:29787053-29787619	chr22	+	29787358	29787590	True	NM_001127,NM_145730,NM_001166019,NM_021026	chr22,chr22,chr22,chr22	-,-,-,+	AP1B1,AP1B1,AP1B1,RFPL1	-2786,-2786,-2786,46981
chr11:89818354-89819084	chr11	+	89818405	89819120	True	NM_001143975,NR_028346	chr11,chr11	+,-	UBTFL1,TRIM53	-3,-82729
chr11:89818354-89819084	chr11	+	49103089	49103146	False	NM_001014986,NR_027044	chr11,chr11	-,+	FOLH1,LOC440040	127133,476933
chr11:89818354-89819084	chr11	-	89487131	89487512	False	NM_001146162,NM_020358	chr11,chr11	+,-	TRIM77,TRIM49	-43722,54288
chrX:64754900-64755277	chrX	+	64754950	64755114	True	NM_001170650,NM_031206,NM_001170649,NM_001010888	chrX,chrX,chrX,chrX	-,-,-,+	LAS1L,LAS1L,LAS1L,ZC3H12B	-264,-264,-264,-46386
chr9:116860622-116860922	chr9	+	116860621	116860893	True	NM_138424,NM_032888	chr9,chr9	-,+	KIF12,COL27A1	494,57337
chr10:64320997-64322981	chr10	+	64321116	64322857	True	NM_000399,NM_199452	chr10,chr10	-,+	EGR2,ZNF365	253320,-40961
chrX:49091050-49091457	chrX	+	49091107	49091514	True	NM_005183,NM_014008	chrX,chrX	-,+	CACNA1F,CCDC22	-1274,412
chr17:56405965-56406171	chr17	+	56405975	56406151	True	NM_024418,NM_004758,NR_027647,NR_029683	chr17,chr17,chr17,chr17	-,-,+,-	BZRAP1,BZRAP1,LPO,MIR142	51,51,-90239,2578
chr5:114939405-114940543	chr5	+	114939591	114940580	True	NM_021649,NM_001284	chr5,chr5	-,+	TICAM2,AP3S1	-1415,237038
chr14:71067413-71067868	chr14	+	71067422	71067924	True	NM_015351,NM_005466	chr14,chr14	+,-	TTC9,MED6	40579,-38
chrX:24176169-24176390	chrX	+	24176182	24176401	True	NM_030624,NM_003410,NM_001178086,NM_001178095,NM_001178085,NM_001178084	chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,+	KLHL15,ZFX,ZFX,ZFX,ZFX,ZFX	-130879,-8392,-8484,-8484,-8400,-8405
chr22:24642831-24643054	chr22	+	24642975	24643103	True	NM_001099782,NM_001099781,NM_004121,NR_003714	chr22,chr22,chr22,chr22	-,-,-,+	GGT5,GGT5,GGT5,POM121L9P	-1865,-1865,-1865,4485
chr19:50169373-50169975	chr19	+	50169516	50169938	True	NM_001040668,NM_138639,NM_001571,NM_001197128,NM_001197127,NM_001197126,NM_001197125,NM_001197124,NM_001197123,NM_001197122	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,-,-,-,-,-,-,-,-	BCL2L12,BCL2L12,IRF3,IRF3,IRF3,IRF3,IRF3,IRF3,IRF3,IRF3	-1168,-1168,-384,-384,-384,-384,-384,-384,-384,-384
chr9:4491415-4491654	chr9	+	4491460	4491630	True	NM_001039395,NM_004170	chr9,chr9	-,+	C9orf68,SLC1A1	175106,-1091
chr1:155192810-155194454	chr1	+	155193023	155194180	True	NR_002188,NM_198883	chr1,chr1	-,+	GBAP1,MTX1	3206,-14584
chr21:39289372-39290523	chr21	+	39289492	39290378	True	NM_002240,NR_026838	chr21,chr21	-,+	KCNJ6,DSCR8	-796,203166
chr14:55504505-55506468	chr14	+	55505020	55506324	True	NM_199421,NM_144578,NM_007086	chr14,chr14,chr14	+,+,-	SOCS4,MAPK1IP1L,WDHD1	-11234,12037,-11201
chr1:15569170-15571113	chr1	+	15569181	15570740	True	NM_052929,NR_027136	chr1,chr1	+,-	FHAD1,C1orf126	3027,-90221
chr2:175849188-175850430	chr2	+	175849438	175850441	True	NM_001025201,NM_024583	chr2,chr2	-,+	CHN1,SCRN3	19784,-589039
chr2:234834221-234834554	chr2	+	234834350	234834480	True	NM_024080,NR_024322	chr2,chr2	+,-	TRPM8,MSL3P1	-8358,-57295
chr20:44541011-44541387	chr20	+	44541033	44541423	True	NM_001167594,NM_006227,NM_182676	chr20,chr20,chr20	+,-,-	CTSA,PLTP,PLTP	-21494,-247,-247
chr8:29998445-29999317	chr8	+	29998670	29999351	True	NM_001100916,NM_006571	chr8,chr8	-,+	MBOAT4,DCTN6	2899,14461
chr17:42021420-42022057	chr17	+	42021428	42021884	True	NR_026770,NM_002722	chr17,chr17	+,-	C17orf88,PPY	-26903,-1595
chr7:131399439-131400304	chr7	+	131399893	131400152	True	NM_005397,NM_013255	chr7,chr7	-,+	PODXL,MKLN1	-158517,-387355
chr19:37995451-37995984	chr19	+	37995584	37995760	True	NM_001013659,NM_152484	chr19,chr19	+,-	ZNF793,ZNF569	2080,-37245
chr12:113440903-113441446	chr12	+	113440917	113441428	True	NM_016817,NM_001193521	chr12,chr12	+,-	OAS2,RASAL1	-24695,132181
chr7:49811052-49811588	chr7	+	49811051	49811543	True	NM_001159878,NM_198570	chr7,chr7	-,+	ZPBP,VWC2	321367,1713
chr12:49246119-49246405	chr12	+	49246127	49246426	True	NM_004818,NM_000725	chr12,chr12	-,+	DDX23,CACNB3	-170,-33666
chr11:71709846-71711131	chr11	+	71709955	71711155	True	NM_001145055,NM_001145057,NM_001039660,NM_001039659,NR_029192,NM_005699,NM_173042,NM_173044	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,-,+,+,+	IL18BP,IL18BP,IL18BP,IL18BP,LOC100133315,IL18BP,IL18BP,IL18BP	21,69,-48,-48,-70462,103,103,-48
chr8:23561131-23561433	chr8	+	23561243	23561471	True	NM_016612,NM_001136271	chr8,chr8	+,-	SLC25A37,NKX2-6	-174931,2501
chr6:56721010-56721967	chr6	+	56721037	56721665	True	NM_152731,NM_001723	chr6,chr6	+,-	BEND6,DST	98107,-213343
chr3:120026031-120026238	chr3	+	120026035	120026287	True	NM_001099678,NM_001168331	chr3,chr3	-,+	LRRC58,NDUFB4	41949,288840
chr19:7796511-7796935	chr19	+	7796544	7796834	True	NM_198492,NM_001144904	chr19,chr19	-,+	CLEC4G,CLEC4M	273,31200
chr17:79982776-79983190	chr17	+	79982879	79983017	True	NM_005052,NM_144998,NM_144999	chr17,chr17,chr17	+,-,+	RAC3,STRA13,LRRC45	6514,-2106,-1650
chr13:50070362-50070581	chr13	+	50070448	50070572	True	NM_001079670,NM_001040444,NM_001040443	chr13,chr13,chr13	-,+,+	CAB39L,PHF11,PHF11	-52227,11,-698
chr9:135820284-135820643	chr9	+	135820364	135820656	True	NM_001135031,NM_001162426,NM_001162427,NM_000368	chr9,chr9,chr9,chr9	+,-,-,-	GFI1B,TSC1,TSC1,TSC1	33441,-344,-344,-344
chr12:81490354-81491196	chr12	+	81490883	81491195	True	NM_024560,NM_004664	chr12,chr12	+,-	ACSS3,LIN7A	-19125,-159189
chr17:18680533-18681014	chr17	+	18680669	18680863	True	NM_016078,NM_001145045	chr17,chr17	+,-	FAM18B1,ZNF286B	3718,-95097
chr1:31539808-31541609	chr1	+	31540110	31541190	True	NM_001020658,NM_014676,NR_002762	chr1,chr1,chr1	-,-,+	PUM1,PUM1,PRO0611	-1546,-1546,-79264
chr6:157100279-157100524	chr6	+	157100462	157100570	True	NM_020732,NM_018452,NM_017519	chr6,chr6,chr6	+,-,+	ARID1B,C6orf35,ARID1B	-1449,644733,-1449
chr11:89706716-89708449	chr11	+	89706768	89708486	True	NR_028346,NM_001136486	chr11,chr11	-,+	TRIM53,TRIM64	27240,-5147
chr11:89706716-89708449	chr11	-	89602359	89603789	False	NM_001164397,NR_028346	chr11,chr11	-,+	TRIM64B,TRIM53	5454,-27245
chr11:43334579-43335561	chr11	+	43334741	43335335	True	NR_024625,NR_033868,NM_006595,NM_001142930,NM_001142931	chr11,chr11,chr11,chr11,chr11	+,-,+,+,+	API5,LOC399881,API5,API5,API5	-1287,-43822,-1287,-1287,-1287
chr3:93689820-93690040	chr3	+	93689862	93689925	True	NM_144996,NM_000313,NM_182896,NM_001174151,NM_001174150,NR_033427	chr3,chr3,chr3,chr3,chr3,chr3	+,-,+,+,+,+	ARL13B,PROS1,ARL13B,ARL13B,ARL13B,ARL13B	9057,3060,9057,9057,9057,9057
chr11:27710317-27711275	chr11	+	27710406	27711207	True	NM_170734,NR_033315	chr11,chr11	-,+	BDNF,BDNF-AS1	10060,-182067
chr15:42260093-42261666	chr15	+	42260226	42261453	True	NM_139265,NM_001114633	chr15,chr15	-,+	EHD4,PLA2G4B	3352,-129266
chr10:1074382-1075945	chr10	+	1074562	1075960	True	NM_033261,NR_024628,NR_024629,NR_027708,NR_027709	chr10,chr10,chr10,chr10,chr10	-,+,+,+,+	IDI2,IDI2-AS1,IDI2-AS1,IDI2-AS1,IDI2-AS1	-2763,-6036,-6036,-6036,-6036
chr7:105029836-105030966	chr7	+	105029921	105030385	True	NM_182692,NM_021930	chr7,chr7	-,+	SRPK2,RINT1	-580,142146
chr4:73434195-73434876	chr4	+	73434262	73434875	True	NM_053036,NM_014243	chr4,chr4	+,-	NPFFR2,ADAMTS3	-529464,63
chr6:31776629-31777049	chr6_qbl_hap6	+	3070442	3070694	False	NM_005345,NM_005527,NM_021177	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	+,-,-	HSPA1A,HSPA1L,LSM2	6243,5838,-2062
chr6:31776629-31777049	chr6_dbb_hap3	+	3062387	3062639	False	NM_005345,NM_005527,NM_021177	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	+,-,-	HSPA1A,HSPA1L,LSM2	6238,5833,-2061
chr6:31776629-31777049	chr6	+	31776804	31777056	True	NM_005345,NM_005527,NM_021177	chr6,chr6,chr6	+,-,-	HSPA1A,HSPA1L,LSM2	6234,5829,-2061
chr6:31776629-31777049	chr6_apd_hap1	+	3091555	3091807	False	NM_005345,NM_005527,NM_021177	chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1	+,-,-	HSPA1A,HSPA1L,LSM2	6244,5839,-2061
chr6:31776629-31777049	chr6_cox_hap2	+	3286377	3286629	False	NM_005345,NM_005527,NM_021177	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,-,-	HSPA1A,HSPA1L,LSM2	6241,5836,-2063
chr8:67838937-67839278	chr8	+	67839027	67839317	True	NR_002598,NR_002599,NM_001136160	chr8,chr8,chr8	-,-,+	SNORD87,SNHG6,C8orf45	-4243,-1250,-55341
chr9:16870567-16870777	chr9	+	16870588	16870674	True	NM_017637,NM_001114395	chr9,chr9	-,+	BNC2,CNTLN	162,264363
chr13:55635868-55636743	chr13	+	55635969	55636793	True	NR_031628,NM_006418	chr13,chr13	-,+	MIR1297,OLFM4	-749786,-2033151
chr7:99379539-99381322	chr7	+	99379859	99381097	True	NM_001202855,NM_017460,NM_022820	chr7,chr7,chr7	-,-,+	CYP3A4,CYP3A4,CYP3A43	771,771,44538
chr16:52969510-52970033	chr16	+	52969632	52969984	True	NR_033920,NM_025134	chr16,chr16	-,+	LOC643714,CHD9	-328745,118960
chr20:42941999-42942492	chr20	+	42942061	42942511	True	NM_178491,NM_001080472	chr20,chr20	+,-	R3HDML,FITM2	23114,-2172
chr11:72525619-72525925	chr11	+	72525695	72525915	True	NM_033388,NM_006645	chr11,chr11	+,-	ATG16L2,STARD10	-295,-20945
chr15:78800953-78802671	chr15	+	78801478	78802310	True	NM_001083612,NM_001166694,NM_001013619	chr15,chr15,chr15	+,-,+	AGPHD1,CHRNA3,AGPHD1	-1638,111377,-1638
chr6:116421255-116421700	chr6	+	116421433	116421712	True	NM_152729,NM_000493	chr6,chr6	+,-	NT5DC1,COL10A1	286,25634
chr12:109275818-109276211	chr12	+	109275837	109276017	True	NM_001917,NM_001161330	chr12,chr12	+,-	DAO,SSH1	-2038,-24478
chr10:60287378-60288540	chr10	+	60287701	60288464	True	NM_001080512,NM_152230	chr10,chr10	+,-	BICC1,IPMK	-14856,-260007
chr9:129378099-129378682	chr9	+	129378132	129378684	True	NM_001174146,NM_001174147,NM_002316,NM_012098	chr9,chr9,chr9,chr9	+,+,+,-	LMX1B,LMX1B,LMX1B,ANGPTL2	-1461,-1461,-1461,506410
chr3:159709148-159709361	chr3	+	159709147	159709385	True	NM_000882,NM_001190242	chr3,chr3	+,-	IL12A,IFT80	-2579,392219
chr3:112006811-112007578	chr3	+	112007150	112007342	True	NM_183061,NM_001004196	chr3,chr3	-,+	SLC9A10,CD200	5782,44573
chr11:61222796-61224275	chr11	+	61222945	61224241	True	NM_001136040,NM_001170753,NM_017841	chr11,chr11,chr11	-,+,+	CPSF7,C11orf66,SDHAF2	-25481,24343,-25406
chr7:75125078-75126678	chr7	+	75125926	75125986	True	NM_001099415,NM_001099435	chr7,chr7	-,+	POM121C,SPDYE5	-10358,-1678
chr11:133828755-133830687	chr11	+	133828777	133830422	True	NM_014987,NR_027276	chr11,chr11	-,+	IGSF9B,LOC100128239	-1897,71744
chr5:66157663-66159278	chr5	+	66157697	66159143	True	NM_005582,NM_015183	chr5,chr5	-,+	CD180,MAST4	333524,-33157
chr20:62368693-62369114	chr20	+	62368939	62369143	True	NM_020062,NM_003224,NM_017806	chr20,chr20,chr20	+,-,+	SLC2A4RG,ARFRP1,LIME1	2067,-29584,-1012
chr17:81010353-81010557	chr17	+	81010398	81010502	True	NM_001004431	chr17	+	METRNL	27064
chr17:81010353-81010557	chr17	+	81010602	81010858	False	NM_001004431	chr17	+	METRNL	26708
chr12:110938909-110939136	chr12	+	110939000	110939188	True	NM_016226,NM_152442,NM_057180	chr12,chr12,chr12	-,+,-	VPS29,RAD9B,VPS29	782,816,782
chr5:6376534-6377442	chr5	+	6376553	6377342	True	NM_001145161,NM_032286	chr5,chr5	+,-	UBE2QL1,MED10	71393,1361
chr8:48187459-48187675	chr8	+	48187458	48187564	True	NM_005195,NM_001080394	chr8,chr8	-,+	CEBPD,KIAA0146	463220,-13970
chr16:25125047-25126852	chr16	+	25125410	25126826	True	NM_018054,NM_001032391,NM_016309	chr16,chr16,chr16	-,+,+	ARHGAP17,LCMT1,LCMT1	-98735,-2414,-2414
chrX:80065741-80066310	chrX	+	80066015	80066330	True	NM_152630,NM_153252	chrX,chrX	+,-	FAM46D,BRWD3	-390120,-782
chr6:15062546-15063533	chr6	+	15062796	15063533	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	182993,599807
chr18:712563-712779	chr18	+	712613	712673	True	NM_001126123,NM_001071,NM_202758,NM_017512	chr18,chr18,chr18,chr18	-,+,-,-	ENOSF1,TYMS,ENOSF1,ENOSF1	39,-55060,-96,39
chr6:41006303-41007448	chr6	+	41006307	41007483	True	NM_173561,NM_001010873,NM_001159726	chr6,chr6,chr6	-,+,+	UNC5CL,TSPO2,TSPO2	-173,2753,2973
chr22:42470866-42471480	chr22	+	42470959	42471349	True	NM_000262,NM_001002034,NM_033318	chr22,chr22,chr22	-,+,+	NAGA,FAM109B,C22orf32	-4113,-755,4349
chr16:739114-739322	chr16	+	739154	739314	True	NM_032259,NM_005861,NM_001005920	chr16,chr16,chr16	-,+,-	WDR24,STUB1,JMJD8	1136,-9090,-4715
chr8:145048765-145049169	chr8	+	145048769	145049141	True	NM_201378,NM_000837,NM_000445	chr8,chr8,chr8	-,+,-	PLEC,GRINA,PLEC	-1072,15084,1822
chrX:48903152-48903357	chrX	+	48903237	48903298	True	NM_001163322,NM_006521	chrX,chrX	+,-	CCDC120,TFE3	13217,-2247
chr16:82084311-82085322	chr16	+	82084350	82085160	True	NM_145168,NM_002153	chr16,chr16	-,+	SDR42E1,HSD17B2	-39257,-15555
chr13:114460917-114461148	chr13	+	114460920	114461096	True	NM_182614,NR_028064	chr13,chr13	+,-	FAM70B,LOC100130386	1119,-6858
chr19:7810557-7810764	chr19	+	7810591	7810737	True	NM_021155,NM_001144893,NM_001144897,NM_001144896,NM_001144895,NM_001144894,NR_026692,NM_001144899,NM_001144904	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,-,+	CD209,CD209,CD209,CD209,CD209,CD209,CD209,CD209,CLEC4M	1777,1777,1777,1777,1777,1777,1777,1777,17297
chr7:100300830-100301696	chr7	+	100301098	100301562	True	NM_005837,NM_022574	chr7,chr7	+,-	POP7,GIGYF1	2113,-14228
chr12:123832507-123832890	chr12	+	123832563	123832872	True	NM_018183,NM_020382,NM_001167856	chr12,chr12,chr12	-,+,-	SBNO1,SETD8,SBNO1	2171,35831,2171
chr1:242672535-242673868	chr1	+	242672688	242673818	True	NM_006027,NM_152666	chr1,chr1	+,-	EXO1,PLD5	-660707,14230
chr19:40897383-40898278	chr19	+	40897589	40898141	True	NM_012268,NM_144685	chr19,chr19	+,-	PLD3,HIPK4	-43315,-1495
chr1:82308133-82309109	chr1	+	82308477	82308744	True	NM_012302,NM_024686	chr1,chr1	+,-	LPHN2,TTLL7	-42454,2156152
chr11:63932754-63933110	chr11	+	63932802	63933150	True	NM_006819,NM_014067	chr11,chr11	+,-	STIP1,MACROD1	20436,485
chr2:110871904-110873008	chr2	+	110872054	110872867	True	NM_005434,NR_037626	chr2,chr2	-,+	MALL,LOC100507334	1333,130347
chrX:154776964-154778250	chrX	+	154777144	154778077	True	NM_018196,NR_036260	chrX,chrX	-,+	TMLHE,MIR1184-3	64608,-90017
chr19:2784917-2785382	chr19	+	2785093	2785417	True	NM_003249,NM_003021	chr19,chr19	+,-	THOP1,SGTA	88,-1739
chr2:27295492-27295696	chr2	+	27295573	27295735	True	NM_007046,NM_001134693	chr2,chr2	+,-	EMILIN1,OST4	5699,-1006
chr19:34396610-34396834	chr19	+	34396656	34396822	True	NM_001166057,NM_024076	chr19,chr19	-,+	PEPD,KCTD15	-383857,-108956
chr11:67775408-67775701	chr11	+	67775475	67775721	True	NM_001030010,NM_030930,NM_000694,NM_001161473	chr11,chr11,chr11,chr11	+,-,+,+	ALDH3B1,UNC93B1,ALDH3B1,ALDH3B1	2068,-3882,2068,326
chr16:2100435-2100751	chr16	+	2100435	2100543	True	NM_000548,NM_001077183,NM_001114382,NM_002528	chr16,chr16,chr16,chr16	+,+,+,-	TSC2,TSC2,TSC2,NTHL1	-2498,-2498,-2498,-2568
chr4:158491471-158492856	chr4	+	158491479	158492881	True	NR_036641,NR_026992	chr4,chr4	-,+	PDGFC,LOC340017	-598933,760
chr15:74286074-74286786	chr15	+	74286122	74286746	True	NM_004809,NM_033238,NM_033239,NM_033250,NM_002675,NM_033247,NM_033246,NM_033244,NM_033240,NM_033249	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,+,+,+,+,+,+,+,+,+	STOML1,PML,PML,PML,PML,PML,PML,PML,PML,PML	-1487,267,267,267,267,267,267,267,267,267
chr19:44584519-44585584	chr19	+	44584833	44585289	True	NM_001037813,NR_033341	chr19,chr19	+,-	ZNF284,LOC100379224	-8588,32097
chr2:27008327-27008877	chr2	+	27008408	27008818	True	NM_001029881,NM_001809,NM_001042426	chr2,chr2,chr2	-,+,+	CIB4,CENPA,CENPA	-144197,63,64
chr19:33462417-33462696	chr19	+	33462580	33462640	True	NM_152266,NM_032816	chr19,chr19	+,-	C19orf40,CCDC123	507,279
chr1:68298614-68298814	chr1	+	68298717	68298797	True	NM_001924,NM_018841	chr1,chr1	+,-	GADD45A,GNG12	-147908,408
chr12:24052063-24053534	chr12	+	24052421	24053548	True	NR_030625,NM_006940	chr12,chr12	+,-	MIR920,SOX5	311806,49144
chr17:40573380-40573739	chr17	+	40573391	40573663	True	NM_001130020,NM_012232	chr17,chr17	+,-	ATP6V0A1,PTRF	37198,1725
chr12:54122182-54124074	chr12	+	54122266	54123866	True	NR_026554,NM_001143682,NM_020898,NM_017410	chr12,chr12,chr12,chr12	-,-,-,+	CALCOCO1,CALCOCO1,CALCOCO1,HOXC13	-959,-959,-959,208709
chr12:10575846-10576551	chr12	+	10575988	10576596	True	NM_007334,NM_007333,NM_002261	chr12,chr12,chr12	+,-,-	KLRD1,KLRC3,KLRC3	-115625,-2794,-2794
chr12:10575846-10576551	chr12	+	10591948	10592000	False	NM_007334,NM_002260	chr12,chr12	+,-	KLRD1,KLRC2	-131584,-3356
chr7:107189927-107191577	chr7	+	107190188	107191405	True	NM_006348,NM_181581	chr7,chr7	-,+	COG5,DUS4L	13611,13026
chr12:15941038-15941364	chr12	+	15941083	15941403	True	NM_004447,NM_007178	chr12,chr12	-,+	EPS8,STRAP	1157,93884
chr17:48473196-48473755	chr17	+	48473335	48473798	True	NM_152463,NM_018509	chr17,chr17	+,-	EME1,LRRC59	-22806,1166
chr11:68815263-68816148	chr11	+	68815440	68816177	True	NM_139075,NM_145015	chr11,chr11	+,-	TPCN2,MRGPRF	172,-34590
chr1:153749210-153749657	chr1	+	153749382	153749668	True	NM_024330,NM_004515	chr1,chr1	+,-	SLC27A3,ILF2	-1665,-105903
chr1:160119915-160121061	chr1	+	160120140	160121110	True	NM_144699,NM_052868	chr1,chr1	+,-	ATP1A4,IGSF8	241,-51732
chr20:45271434-45272623	chr20	+	45271586	45272327	True	NM_022829,NM_030777,NM_001193342,NM_001193339	chr20,chr20,chr20,chr20	-,+,-,-	SLC13A3,SLC2A10,SLC13A3,SLC13A3	7830,65951,7830,7830
chr3:42307759-42309280	chr3	+	42307781	42309314	True	NM_014965,NM_001174138,NM_000729	chr3,chr3,chr3	+,-,-	TRAK1,CCK,CCK	-106171,-2342,-119
chr5:148520478-148520733	chr5	+	148520505	148520718	True	NM_024577,NM_014945	chr5,chr5	-,+	SH3TC2,ABLIM3	-77768,335
chr3:139256820-139257391	chr3	+	139256835	139257422	True	NM_001130992,NM_020191,NM_001130993,NM_002899	chr3,chr3,chr3,chr3	-,+,-,-	RBP1,MRPS22,RBP1,RBP1	1299,-194025,1299,1299
chrX:110547717-110548800	chrX	+	110547932	110548854	True	NM_001128173,NM_014289	chrX,chrX	+,-	PAK3,CAPN6	-181678,-34158
chr22:17081598-17081985	chr7	-	152134155	152134282	False	NR_002935,NM_170606	chr7,chr7	+,-	FABP5P3,MLL3	-231,-1065
chr22:17081598-17081985	chr22	+	17081684	17081984	True	NM_014406,NR_001591	chr22,chr22	-,+	CCT8L2,psiTPTE22	-7984,816
chr2:106471459-106472449	chr2	+	106471516	106472214	True	NM_025076,NM_001004720	chr2,chr2	-,+	UXS1,NCK2	338631,-3363
chr3:15667153-15668673	chr3	+	15667648	15668639	True	NM_000060,NM_012260	chr3,chr3	+,-	BTD,HACL1	-24457,-24518
chr9:6326804-6328317	chr9	+	6326970	6328210	True	NM_001001875,NM_001001874,NR_024095,NM_033516	chr9,chr9,chr9,chr9	+,+,-,+	TPD52L3,TPD52L3,RANBP6,TPD52L3	138,138,-311330,138
chr18:32074070-32074284	chr18	+	32074074	32074270	True	NM_001198945,NM_001392,NM_032979,NM_003787,NM_032975	chr18,chr18,chr18,chr18,chr18	+,+,+,-,+	DTNA,DTNA,DTNA,NOL4,DTNA	-871,-871,-871,-270559,-871
chr16:4475249-4475746	chr16	+	4475437	4475715	True	NM_005147,NM_001135110,NM_024535,NM_001201473,NM_001201472,NM_001201479	chr16,chr16,chr16,chr16,chr16,chr16	+,+,-,-,-,-	DNAJA3,DNAJA3,CORO7,CORO7,CORO7,CORO7-PAM16	142,142,-8475,-8475,-8475,-8475
chr5:107687128-107687915	chr5	+	107687268	107687946	True	NM_005246,NM_001163315	chr5,chr5	+,-	FER,FBXL17	395576,29903
chr10:5933663-5934116	chr10	+	5933885	5934155	True	NM_019046,NM_001009941,NM_178150,NM_001009943,NM_032807	chr10,chr10,chr10,chr10,chr10	-,-,+,-,+	ANKRD16,ANKRD16,FBXO18,ANKRD16,FBXO18	-2025,-2025,-1729,-2025,2193
chr4:6992098-6992646	chr4	+	6992238	6992620	True	NM_153376,NM_001113363	chr4,chr4	-,+	CCDC96,TBC1D14	52158,-3400
chr5:43599428-43600426	chr5	+	43599591	43600100	True	NM_182977,NM_012343,NM_183323	chr5,chr5,chr5	+,+,-	NNT,NNT,PAIP1	3128,2690,-42070
chr11:118937769-118938258	chr11	+	118937976	118938284	True	NM_021729,NM_001130991	chr11,chr11	+,-	VPS11,HYOU1	208,-10051
chr19:9649305-9650256	chr19	+	9649309	9650075	True	NM_024106,NM_001172651	chr19,chr19	-,+	ZNF426,ZNF177	-6,-162368
chr21:34639502-34639911	chr21	+	34639548	34639736	True	NM_000628,NR_024102	chr21,chr21	+,-	IL10RB,C21orf54	-927,-97007
chr19:36342096-36342298	chr19	+	36342120	36342282	True	NM_199180,NM_004646,NM_032123,NM_199179	chr19,chr19,chr19,chr19	+,-,+,+	KIRREL2,NPHS1,KIRREL2,KIRREL2	5527,663,5527,5527
chr3:38350628-38352405	chr3	+	38350651	38352419	True	NM_004803,NR_028389	chr3,chr3	+,-	SLC22A14,LOC100128640	-3257,143942
chr10:99400091-99400407	chr10	+	99400112	99400318	True	NM_018425,NM_178832,NM_001098831	chr10,chr10,chr10	+,-,-	PI4K2A,MORN4,MORN4	124,-6768,-6199
chr13:49080707-49081264	chr13	+	49080795	49081160	True	NM_001268,NM_020377	chr13,chr13	-,+	RCBTB2,CYSLTR2	26207,199790
chr4:148648365-148649366	chr4	+	148648698	148649286	True	NM_138364,NM_024605	chr4,chr4	-,+	PRMT10,ARHGAP10	-43418,4166
chr5:169780745-169781407	chr5	+	169780898	169781376	True	NM_004137,NM_001034838	chr5,chr5	-,+	KCNMB1,KCNIP1	35312,-68
chr3:121903562-121903889	chr3	+	121903608	121903892	True	NM_000388,NM_001178065,NM_001199799	chr3,chr3,chr3	+,+,-	CASR,CASR,ILDR1	-1129,-478,-162481
chr1:159869031-159869348	chr1	+	159869106	159869248	True	NM_012337,NM_020125	chr1,chr1	-,+	CCDC19,SLAMF8	708,-72681
chr8:96281711-96282288	chr8	+	96281763	96282257	True	NM_177965,NM_024613	chr8,chr8	-,+	C8orf37,PLEKHF2	-301,-135865
chr20:4718570-4718999	chr20	+	4718781	4719014	True	NR_024267,NR_024268,NR_024269,NM_012409	chr20,chr20,chr20,chr20	-,-,-,+	PRNT,PRNT,PRNT,PRND	2350,2350,2350,-16278
chr20:36663657-36664001	chr20	+	36663705	36663885	True	NM_021215,NM_014657	chr20,chr20	+,-	RPRD1B,TTI1	-1808,-1872
chr8:65488743-65488984	chr8	+	65488769	65488879	True	NM_152414,NR_015374	chr8,chr8	+,-	BHLHE22,LOC401463	3915,991
chr12:8850038-8850410	chr12	+	8850129	8850403	True	NM_003480,NM_020734	chr12,chr12	-,+	MFAP5,RIMKLB	-34696,114
chr8:81178168-81178540	chr8	+	81178172	81178511	True	NM_005079,NM_001105539	chr8,chr8	-,+	TPD52,ZBTB10	-94336,219936
chr7:16624025-16624546	chr7	+	16624243	16624519	True	NM_001195280,NM_020319	chr7,chr7	+,-	LOC100506049,ANKMY2	-57789,60973
chr15:34788187-34788823	chr7	+	5645392	5645442	True	NM_001101,NM_003088	chr7,chr7	-,+	ACTB,FSCN1	-75160,-12989
chr19:10492464-10493092	chr19	+	10492610	10492785	True	NM_001111307,NM_003331	chr19,chr19	+,-	PDE4A,TYK2	38547,-1362
chr3:136470075-136470610	chr3	+	136470074	136470563	True	NM_001097599,NM_005862	chr3,chr3	+,-	TMEM22,STAG1	67297,732
chr16:53537601-53537879	chr16	+	53537620	53537762	True	NM_022476,NM_001012398,NM_005611	chr16,chr16,chr16	-,-,+	AKTIP,AKTIP,RBL2	-450,-450,-69320
chr12:125479260-125480149	chr12	+	125479397	125480049	True	NM_032656,NM_080626	chr12,chr12	-,+	DHX37,BRI3BP	-5730,-1254
chr4:16229099-16230003	chr4	+	16229236	16229912	True	NM_153365,NR_027696,NR_027697	chr4,chr4,chr4	-,+,+	TAPT1,FLJ39653,FLJ39653	-1075,-1001,-1001
chr1:159142709-159142911	chr1	+	159142736	159142950	True	NM_001127173,NM_021189,NR_037870	chr1,chr1,chr1	+,+,-	CADM3,CADM3,LOC100131825	-1373,-1410,29312
chr14:23792355-23793390	chr14	+	23792391	23793306	True	NR_026862,NM_004643	chr14,chr14	-,+	PPP1R3E,PABPN1	-20334,-3045
chr4:84258220-84258477	chr4	+	84258346	84258473	True	NM_006665,NM_001098540,NM_001166498,NM_001199830,NM_016067	chr4,chr4,chr4,chr4,chr4	-,-,-,-,+	HPSE,HPSE,HPSE,HPSE,MRPS18C	-2040,-2312,-2040,-2380,118644
chr6:47253223-47253820	chr6	+	47253271	47253869	True	NM_012120,NM_014452	chr6,chr6	+,-	CD2AP,TNFRSF21	191655,23861
chr16:1146159-1146385	chr16	+	1146159	1146293	True	NM_207419,NM_001053	chr16,chr16	-,+	C1QTNF8,SSTR5	1,-17429
chr3:110790237-110790477	chr3	+	110790328	110790388	True	NM_024508,NM_015480	chr3,chr3	-,+	ZBED2,PVRL3	523828,476
chr2:74611498-74612707	chr2	+	74611497	74612533	True	NM_001135040,NM_001135041,NM_023019,NM_001190836,NM_001190837,NR_024463,NR_033935,NM_004082	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	-,-,-,-,-,+,-,-	DCTN1,DCTN1,DCTN1,DCTN1,DCTN1,LOC100189589,DCTN1,DCTN1	-4015,-9635,-9635,6731,-4015,311,6731,-4015
chr16:31129381-31130058	chr16	+	31129405	31130103	True	NM_002773,NM_001122957,NM_032188,NM_182958,NM_005881	chr16,chr16,chr16,chr16,chr16	-,+,+,+,+	PRSS8,BCKDK,MYST1,MYST1,BCKDK	17098,-9794,-471,-471,-9794
chr17:75446338-75447347	chr17	+	75446384	75447338	True	NM_001113496,NR_036200	chr17,chr17	+,-	SEPT9,MIR4316	-44,-53248
chr2:203103421-203104025	chr2	+	203103531	203103817	True	NM_003352,NM_001005782,NM_001005781,NM_015934	chr2,chr2,chr2,chr2	-,-,-,+	SUMO1,SUMO1,SUMO1,NOP58	-209,-209,-209,26697
chr20:591219-591877	chr20	+	591304	591828	True	NM_004609,NM_031229	chr20,chr20	-,+	TCF15,RBCK1	-394,-202646
chr16:2480613-2481535	chr16	+	2480678	2481359	True	NM_001761,NM_001089	chr16,chr16	+,-	CCNF,ABCA3	-1341,-89931
chr20:5592150-5593299	chr20	+	5592400	5593100	True	NM_019593,NM_152504	chr20,chr20	-,+	GPCPD1,C20orf196	-728,137942
chr4:81106325-81106632	chr4	+	81106346	81106598	True	NM_020226,NM_001145794	chr4,chr4	+,-	PRDM8,ANTXR2	26,-111869
chr13:100622892-100623127	chr13	+	100622910	100623054	True	NM_033132,NM_007129	chr13,chr13	-,+	ZIC5,ZIC2	1174,10971
chr2:100102845-100103622	chr2	+	100103079	100103647	True	NM_015904,NM_001037872,NM_016316	chr2,chr2,chr2	+,-,-	EIF5B,REV1,REV1	-149296,2883,2883
chr11:55432145-55433816	chr11	+	55432191	55433512	True	NM_001004700,NM_001004704	chr11,chr11	-,+	OR4C11,OR4C6	-60342,-6
chr14:93263289-93264185	chr14	+	93263676	93264082	True	NM_005606,NM_005113	chr14,chr14	-,+	LGMN,GOLGA5	-48629,-3077
chr20:50158289-50159065	chr20	+	50158291	50158968	True	NM_173091,NM_014484,NM_012340	chr20,chr20,chr20	-,+,-	NFATC2,MOCS3,NFATC2	340,-582979,340
chr8:82633893-82634190	chr8	+	82634081	82634203	True	NM_001170797,NM_001170796,NM_024699,NR_033196,NR_033194,NR_033195,NR_033193,NM_152284	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,-,-,-,+	ZFAND1,ZFAND1,ZFAND1,ZFAND1,ZFAND1,ZFAND1,ZFAND1,CHMP4C	-542,-542,-542,-542,-542,-542,-542,10484
chr2:128155880-128156405	chr2	+	128155906	128156270	True	NM_000312,NM_006609	chr2,chr2	+,-	PROC,MAP3K2	19725,-55136
chr22:35535706-35536727	chr22	+	35535825	35536496	True	NM_001008494,NM_005368	chr22,chr22	+,-	ISX,MB	-73754,476938
chr17:45908030-45908882	chr17	+	45908235	45908925	True	NM_138355,NR_037575,NM_145798,NM_148887,NM_001145023,NM_033413,NM_145255	chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,+,-	SCRN2,MRPL10,OSBPL7,MRPL10,SCRN2,LRRC46,MRPL10	9824,32,-9088,32,9824,67,32
chr17:74870735-74872043	chr17	+	74870929	74871988	True	NM_144677,NM_198955,NM_001199172,NR_036608	chr17,chr17,chr17,chr17	+,+,+,-	MGAT5B,MGAT5B,MGAT5B,SRSF2	-6182,-2251,-6182,-137436
chr2:23684489-23685232	chr2	+	23684634	23685271	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	464713,-76387
chr19:45458247-45458498	chr19	+	45458260	45458476	True	NM_001199468,NM_001294,NM_000483,NM_145288	chr19,chr19,chr19,chr19	+,+,+,-	CLPTM1,CLPTM1,APOC2,ZNF296	122,122,-9072,121262
chr11:2012478-2012886	chr11	+	2012628	2012860	True	NR_024471,NR_002196,NR_030533,NM_021134	chr11,chr11,chr11,chr11	-,-,-,+	LOC100133545,H19,MIR675,MRPL23	-1478,6255,5251,-44177
chr16:48278880-48279913	chr16	+	48278964	48279939	True	NM_032583,NM_145186,NM_031490	chr16,chr16,chr16	-,-,+	ABCC11,ABCC11,LONP2	-9876,-9876,-804
chr11:72140043-72140872	chr11	+	72140082	72140841	True	NM_001567,NM_030813	chr11,chr11	+,-	INPPL1,CLPB	-204251,4777
chr17:39388034-39388408	chr17	+	39388053	39388395	True	NM_031961,NM_031962,NM_031963,NM_033060	chr17,chr17,chr17,chr17	+,+,+,-	KRTAP9-2,KRTAP9-3,KRTAP9-8,KRTAP4-1	-5204,319,5874,-46906
chr1:51812153-51812801	chr1	+	51812160	51812730	True	NM_014372,NM_001144832	chr1,chr1	+,-	RNF11,TTC39A	-110279,-1375
chrX:13757789-13758977	chrX	+	13757934	13758571	True	NM_001128835,NM_001011658,NM_014563,NM_003611	chrX,chrX,chrX,chrX	-,-,-,+	TRAPPC2,TRAPPC2,TRAPPC2,OFD1	-5180,-5180,-5180,-5155
chr10:116289174-116289708	chr10	+	116289173	116289417	True	NM_198496,NM_006720	chr10,chr10	+,-	VWA2,ABLIM1	-290206,-2488
chr21:46222612-46222816	chr21	+	46222706	46222794	True	NM_182688,NM_003343,NM_198699,NM_001202489	chr21,chr21,chr21,chr21	-,-,+,-	UBE2G2,UBE2G2,KRTAP10-12,UBE2G2	-955,-955,-105672,-955
chr8:20112721-20112948	chr8	+	20112786	20112994	True	NM_021020,NM_001693	chr8,chr8	-,+	LZTS1,ATP6V1B2	17,-58133
chr19:45752928-45753753	chr19	+	45753175	45753705	True	NM_031417,NM_001199867,NM_138568	chr19,chr19,chr19	+,+,-	MARK4,MARK4,EXOC3L2	810,810,-15706
chr3:3154593-3155226	chr3	+	3154915	3155259	True	NM_000564,NM_175728,NM_182916,NM_175725,NM_175724,NM_175727,NM_175726	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,+,-,-,-,-	IL5RA,IL5RA,TRNT1,IL5RA,IL5RA,IL5RA,IL5RA	-2857,-2857,13340,-2857,-2857,-2857,-2857
chr17:74703932-74704262	chr17	+	74703955	74704071	True	NM_001008528,NM_001008529,NM_001080510,NM_198530	chr17,chr17,chr17,chr17	-,-,+,-	MXRA7,MXRA7,METTL23,MXRA7	3035,3035,18878,3035
chr1:156472039-156472851	chr1	+	156472079	156472878	True	NM_001105669,NM_005920	chr1,chr1	+,-	TTC24,MEF2D	76640,-1550
chrX:103500954-103501232	chrX	+	103501053	103501125	True	NM_153448,NM_207318	chrX,chrX	-,+	ESX1,FAM199X	-1454,-89811
chr7:55754465-55755183	chr7	+	55754556	55755146	True	NM_182633,NR_027342,NR_027339,NR_027340	chr7,chr7,chr7,chr7	+,-,-,-	ZNF713,FKBP9L,FKBP9L,FKBP9L	225184,1898,2057,629
chr7:55754465-55755183	chr7	-	33040199	33040337	False	NM_001166118,NM_007270	chr7,chr7	-,+	NT5C3,FKBP9	40241,-43245
chr3:33840088-33840539	chr3	+	33840155	33840429	True	NM_001162429,NR_027868,NM_013374,NM_015097	chr3,chr3,chr3,chr3	+,+,+,-	PDCD6IP,PDCD6IP,PDCD6IP,CLASP2	-140,-140,-140,-80307
chr18:3351940-3352461	chr18	+	3352223	3352478	True	NM_019856,NM_174886	chr18,chr18	-,+	MYOM1,TGIF1	-132117,59593
chr9:136341913-136342155	chr9	+	136342009	136342127	True	NM_017586,NM_001145099,NM_017585	chr9,chr9,chr9	+,-,-	C9orf7,SLC2A6,SLC2A6	-16973,2199,2199
chr17:38474299-38474507	chr17	+	38474299	38474555	True	NM_000964,NM_001145301,NM_001145302,NM_152219	chr17,chr17,chr17,chr17	+,+,+,-	RARA,RARA,RARA,GJD3	-8927,-83,-83,46440
chr1:116916802-116917077	chr1	+	116916825	116917119	True	NM_001160234,NM_000701,NM_001160233,NR_024126	chr1,chr1,chr1,chr1	+,+,+,-	ATP1A1,ATP1A1,ATP1A1,ATP1A1OS	8872,-1082,-388,44112
chr18:161622-162888	chr18	+	161644	162667	True	NM_005131,NM_005151,NM_001037334	chr18,chr18,chr18	-,+,+	THOC1,USP14,USP14	105451,-3223,-3223
chr3:138764941-138765940	chr3	+	138765113	138765752	True	NM_001134657,NR_026783	chr3,chr3	-,+	PRR23C,BPESC1	-1379,57274
chr1:70817945-70819544	chr1	+	70818152	70819560	True	NM_030816,NR_027404,NM_001036645,NM_001036646,NM_001031693	chr1,chr1,chr1,chr1,chr1	-,+,+,+,+	ANKRD13C,HHLA3,HHLA3,HHLA3,HHLA3	907,932,932,932,932
chr17:34884668-34886378	chr17	+	34884668	34886253	True	NM_001163735,NM_178517,NM_001033580,NM_025109	chr17,chr17,chr17,chr17	-,+,-,-	MYO19,PIGW,MYO19,MYO19	5103,5149,5103,5103
chr21:43373157-43373422	chr21	+	43373172	43373312	True	NM_015500,NR_027273	chr21,chr21	-,+	C2CD2,C21orf121	737,68800
chr1:38456367-38456603	chr1	+	38456457	38456541	True	NM_016037,NM_006802	chr1,chr1	+,-	UTP11L,SF3A3	21842,-696
chr20:30131246-30131454	chr20	+	30131389	30131453	True	NM_001037500,NR_003677	chr20,chr20	-,+	DEFB124,PSIMCT-1	-70573,3731
chr2:65284058-65285731	chr2	+	65284197	65285323	True	NM_004161,NM_015147	chr2,chr2	-,+	RAB1A,CEP68	72175,-753
chr16:89558315-89558662	chr16	+	89558443	89558703	True	NM_199367,NM_013275	chr16,chr16	+,-	SPG7,ANKRD11	16101,-1474
chr7:103624250-103625653	chr7	+	103624545	103625494	True	NM_005045,NM_173054,NM_199000	chr7,chr7,chr7	-,-,+	RELN,RELN,LHFPL3	4527,4527,343609
chr3:87039230-87039534	chr3	+	87039230	87039488	True	NM_016206,NM_014043	chr3,chr3	-,+	VGLL3,CHMP2B	819,236924
chr8:95836615-95837426	chr8	+	95836678	95837408	True	NM_017864,NM_057749	chr8,chr8	+,-	INTS8,CCNE2	-1196,70125
chr2:182353376-182354787	chr2	+	182353637	182354475	True	NM_001030311,NM_000885	chr2,chr2	-,+	CERKL,ITGA4	167409,-32069
chr18:19751939-19752156	chr18	+	19751975	19752085	True	NM_005257,NM_172241	chr18,chr18	+,-	GATA6,CTAGE1	-2610,245843
chr13:43351540-43353484	chr13	+	43351711	43353532	True	NM_001002264,NM_182508	chr13,chr13	-,+	EPSTI1,C13orf30	212895,2153
chr12:133608686-133610574	chr12	+	133608769	133610538	True	NM_003428,NM_001164715,NM_001127372	chr12,chr12,chr12	+,-,+	ZNF84,ZNF605,ZNF84	3339,-75877,3441
chr10:62704445-62704647	chr10	+	62704460	62704692	True	NM_033379,NR_024556,NM_014836	chr10,chr10,chr10	+,-,-	CDK1,RHOBTB1,RHOBTB1	-166299,-427,-427
chr8:26323378-26324759	chr8	+	26323499	26324667	True	NM_001197293,NM_007257	chr8,chr8	+,-	DPYSL2,PNMA2	47041,46867
chr17:37764291-37764589	chr17	+	37764389	37764555	True	NM_032192,NM_006160	chr17,chr17	+,-	PPP1R1B,NEUROD2	18623,-214
chr19:10305753-10306412	chr19	+	10305928	10306142	True	NM_001130823,NR_036206,NM_001379	chr19,chr19,chr19	-,+,-	DNMT1,MIR4322,DNMT1	-173,34946,-173
chr10:29580780-29582205	chr10	+	29581346	29581987	True	NR_030335,NM_032517	chr10,chr10	-,+	MIR604,LYZL1	252096,-3407
chr9:137029243-137029969	chr9	+	137029673	137029842	True	NR_023344,NM_052821	chr9,chr9	-,+	RNU6ATAC,WDR5	-3,-24810
chr17:38657063-38657553	chr17	+	38657063	38657422	True	NM_032865,NM_001552	chr17,chr17	-,+	TNS4,IGFBP4	483,-57438
chr1:7835566-7837025	chr1	+	7836030	7836870	True	NM_006786,NM_004781,NM_016831	chr1,chr1,chr1	-,+,+	UTS2,VAMP3,PER3	76284,-4765,7892
chr7:73666659-73667238	chr7	+	73666744	73666991	True	NM_181471,NM_003388,NM_002914	chr7,chr7,chr7	-,+,-	RFC2,CLIP2,RFC2	1806,36813,1806
chr4:156275706-156276093	chr4	+	156275895	156276024	True	NM_000910,NM_001039580	chr4,chr4	+,-	NPY2R,MAP9	-146171,22161
chr5:131989503-131990996	chr5	+	131989517	131990849	True	NM_007054,NM_002188	chr5,chr5	-,+	KIF3A,IL13	82466,3015
chr11:66186303-66187374	chr11	+	66186346	66187116	True	NM_178864,NM_016050	chr11,chr11	+,-	NPAS4,MRPL11	1358,19244
chr5:126113102-126113322	chr5	+	126113295	126113365	True	NM_005573,NM_001198557,NM_001202404	chr5,chr5,chr5	+,+,-	LMNB1,LMNB1,ALDH7A1	-1031,-501,-182213
chr3:183143665-183145565	chr3	+	183143917	183145083	True	NM_015078,NM_032047	chr3,chr3	-,+	MCF2L2,B3GNT5	822,-172936
chr11:7527907-7528902	chr11	+	7527991	7528777	True	NM_003621,NM_016229	chr11,chr11	+,-	PPFIBP2,CYB5R2	6223,166100
chr2:219575454-219575685	chr2	+	219575454	219575726	True	NM_022453,NM_014640	chr2,chr2	-,+	RNF25,TTLL4	-38673,-23
chr4:21308188-21308750	chr4	+	21308199	21308783	True	NM_145048,NM_147183	chr4,chr4	+,-	PACRGL,KCNIP4	-606219,-2670
chr11:8836634-8838499	chr11	+	8836885	8838434	True	NM_139157,NM_213618,NM_020642	chr11,chr11,chr11	-,-,+	ST5,ST5,C11orf17	-4003,-4661,94266
chrX:48860475-48861505	chrX	+	48860817	48861406	True	NM_001163322,NM_207672,NM_020137	chrX,chrX,chrX	+,-,-	CCDC120,GRIPAP1,GRIPAP1	55109,-2142,-2142
chr15:39872900-39873200	chr15	+	39873002	39873096	True	NM_152597,NM_003246	chr15,chr15	-,+	FSIP1,THBS1	201993,183
chr3:179182796-179183036	chr3	+	179182796	179183036	True	NM_004301,NM_021629	chr3,chr3	+,-	ACTL6A,GNB4	97671,-13425
chr9:35660159-35660824	chr9	+	35660188	35660838	True	NM_032818,NM_014450,NR_003051,NM_001195200,NM_001195201,NM_001195217,NM_174923	chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,-,-,+,+,+,+	C9orf100,SIT1,RMRP,CCDC107,CCDC107,CCDC107,CCDC107	4490,-9241,-2173,-1952,-1952,-1952,-1952
chr7:72846399-72846762	chr7	+	72846417	72846581	True	NM_003508,NM_032408	chr7,chr7	+,-	FZD9,BAZ1B	1527,90084
chr1:2123732-2123968	chr1	+	2123734	2123918	True	NM_003036,NR_024445,NM_182533	chr1,chr1,chr1	+,-,-	SKI,LOC100128003,C1orf86	36215,1160,2350
chr19:35817993-35819592	chr19	+	35818022	35819640	True	NM_152481,NM_001771,NM_001185099,NM_001185100,NM_001185101	chr19,chr19,chr19,chr19,chr19	-,+,+,+,+	FAM187B,CD22,CD22,CD22,CD22	-98394,431,431,431,431
chr15:64673009-64673478	chr15	+	64673028	64673442	True	NM_014736,NM_001029989,NM_016213	chr15,chr15,chr15	-,-,+	KIAA0101,KIAA0101,TRIP4	310,310,6560
chr9:139334695-139335439	chr9	+	139334779	139335427	True	NM_019892,NM_015160	chr9,chr9	-,+	INPP5E,PMPCA	-523,-29714
chr2:63276691-63276999	chr2	+	63276726	63276916	True	NR_027069,NM_014562,NM_001199770,NR_033389	chr2,chr2,chr2,chr2	-,+,+,-	LOC100132215,OTX1,OTX1,LOC100132215	-1880,1020,275,-1070
chr9:21965124-21965484	chr9	+	21965164	21965511	True	NM_058197,NM_001195132,NM_000077,NR_024274	chr9,chr9,chr9,chr9	-,-,-,+	CDKN2A,CDKN2A,CDKN2A,C9orf53	9365,9671,9671,1626
chr19:1065182-1065726	chr19	+	1065247	1065745	True	NM_002695,NM_012292	chr19,chr19	-,+	POLR2E,HMHA1	29696,1428
chr5:173156528-173157700	chr5	+	173156743	173157569	True	NR_027109,NM_138369	chr5,chr5	+,-	LOC285593,BOD1	-150137,-113077
chr4:8443048-8443498	chr4	+	8443078	8443445	True	NM_152544,NM_001101667,NM_003501	chr4,chr4,chr4	+,-,-	METTL19,ACOX3,ACOX3	-597,-626,-626
chr9:69179294-69180461	chr9	+	69179403	69179778	True	NR_015361,NM_001098805	chr9,chr9	-,+	LOC440896,ANKRD20A4	1324,202202
chr9:69179294-69180461	chr9	-	70939788	70940163	False	NR_015423,NM_199135	chr9,chr9	-,+	LOC572558,FOXD4L3	32644,-22067
chr18:48562487-48562818	chr18	+	48562561	48562825	True	NM_005359,NM_016626	chr18,chr18	+,-	SMAD4,MEX3C	-6037,161284
chr3:43139475-43140368	chr3	+	43139708	43140402	True	NM_001129908,NM_032806	chr3,chr3	+,-	FAM198A,C3orf39	-119000,7213
chr17:27526692-27527452	chr17	+	27527013	27527493	True	NM_203318,NM_005208	chr17,chr17	-,+	MYO18A,CRYBA1	-19606,46381
chr15:60295717-60295944	chr15	+	60295717	60295949	True	NM_012182,NM_004330	chr15,chr15	+,-	FOXB1,BNIP2	471,-314075
chr1:201185325-201185675	chr1	+	201185379	201185723	True	NM_001164586,NM_016456	chr1,chr1	+,-	IGFN1,TMEM9	-25477,-61747
chr17:79269797-79270284	chr17	+	79269829	79270127	True	NM_001037984,NM_138570,NM_001086521	chr17,chr17,chr17	-,-,+	SLC38A10,SLC38A10,C17orf89	-733,-733,-56769
chr3:120169712-120169976	chr3	+	120169715	120169853	True	NM_001168331,NM_007085	chr3,chr3	+,-	NDUFB4,FSTL1	145274,115
chr15:44947006-44948152	chr15	+	44947061	44948197	True	NM_004048,NM_001160227,NM_025137	chr15,chr15,chr15	+,-,-	B2M,SPG11,SPG11	55487,7729,7729
chr1:27308707-27309864	chr1	+	27309419	27309649	True	NM_152365,NM_001013642	chr1,chr1	-,+	C1orf172,TRNP1	-22518,10545
chr11:72144506-72145183	chr11	+	72144629	72145151	True	NM_001567,NM_030813	chr11,chr11	+,-	INPPL1,CLPB	-208799,467
chr5:173122089-173122717	chr5	+	173122127	173122642	True	NR_027109,NM_138369	chr5,chr5	+,-	LOC285593,BOD1	-115522,-78461
chr8:24771854-24772265	chr8	+	24771909	24772205	True	NM_005382,NM_006158,NM_001105541	chr8,chr8,chr8	+,-,+	NEFM,NEFL,NEFM	-686,41976,249
chr8:102177150-102178616	chr8	+	102177151	102178388	True	NM_001042511,NR_033962	chr8,chr8	-,+	ZNF706,FLJ42969	39549,-112928
chr6:125256888-125257987	chr6	+	125257176	125258033	True	NR_026876,NM_152553	chr6,chr6	-,+	STL,RNF217	26197,46480
chr13:114237959-114238589	chr13	+	114238487	114238561	True	NM_000705,NM_007111,NR_026580	chr13,chr13,chr13	-,+,+	ATP4B,TFDP1,TFDP1	74002,494,441
chr15:50838542-50839225	chr15	+	50838612	50839156	True	NM_005154,NM_203494	chr15,chr15	+,-	USP8,USP50	-122084,-22
chr15:75290667-75291271	chr15	+	75290851	75291240	True	NM_001178111,NM_017793,NM_001178112,NR_033660,NM_138967	chr15,chr15,chr15,chr15,chr15	+,-,+,+,+	SCAMP5,RPP25,SCAMP5,SCAMP5,SCAMP5	-3026,-41076,-3026,-3026,-3026
chr12:50237040-50237338	chr12	+	50237099	50237357	True	NM_181708,NR_027501	chr12,chr12	-,+	BCDIN3D,LOC100286844	-187,-14831
chr17:58096969-58097568	chr17	+	58097123	58097554	True	NM_003161,NR_002924	chr17,chr17	+,-	RPS6KB1,DHX40P1	-126731,-787
chr17:58096969-58097568	chr17	+	36349666	36349723	False	NM_032258,NM_001123391	chr17,chr17	-,-	TBC1D3F,TBC1D3	-1000,-1000
chr17:58096969-58097568	chr17	+	60353702	60354121	False	NR_027486,NM_001144933	chr17,chr17	-,+	TBC1D3P2,EFCAB3	-686,93457
chr17:58096969-58097568	chr17	-	58203713	58204144	False	NM_000717,NR_027408	chr17,chr17	+,-	CA4,LOC653653	23157,-23433
chr1:208084197-208084510	chr1	+	208084327	208084497	True	NM_001773,NM_001025109,NR_026817	chr1,chr1,chr1	-,-,+	CD34,CD34,LOC148696	236,236,-92654
chr5:37377527-37378258	chr5	+	37377969	37378087	True	NM_153485,NM_018034,NM_004298	chr5,chr5,chr5	-,+,-	NUP155,WDR70,NUP155	-6772,1324,-7082
chr17:73261548-73261802	chr17	+	73261552	73261844	True	NM_015971,NR_036520,NM_001172703,NM_001172704,NM_138619,NM_020679,NR_033345,NM_014001	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,-,-,-,-,-,-	MRPS7,LOC100287042,GGA3,GGA3,GGA3,MIF4GD,GGA3,GGA3	-3855,5535,-3108,-3108,-3845,5509,-3845,-3845
chr17:7464487-7464760	chr17	+	7464629	7464757	True	NM_172087,NM_003808,NR_037926,NM_172088,NM_006942,NM_001198624,NM_015670,NM_001198623,NM_001198622	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,-,+,+,+,+	TNFSF13,TNFSF13,SENP3-EIF4A1,TNFSF13,SOX15,TNFSF13,SENP3,TNFSF13,TNFSF13	-3071,-3071,551,-3071,28781,-3071,551,-3071,-3071
chr12:57634342-57634575	chr12	+	57634353	57634555	True	NM_020142,NM_001166357	chr12,chr12	-,+	NDUFA4L2,SHMT2	-30,-10261
chr8:67977225-67978856	chr8	+	67977384	67978892	True	NM_024790,NM_006837	chr8,chr8	+,-	CSPP1,COPS5	-832,-2822
chr13:92051185-92051444	chr13	+	92051190	92051432	True	NR_027039,NM_004466	chr13,chr13	-,+	LOC144776,GPC5	-472339,-306
chr1:40975317-40976829	chr1	+	40975323	40976361	True	NM_022774,NM_014747	chr1,chr1	+,-	DEM1,RIMS3	-947,155020
chr7:139746944-139748056	chr7	+	139747088	139748002	True	NM_022750,NR_024451	chr7,chr7	-,+	PARP12,LOC100134229	15569,129058
chr3:109056616-109057895	chr3	+	109056693	109057763	True	NM_018189,NM_001145553	chr3,chr3	-,+	DPPA4,FLJ25363	-274,71073
chr10:14373128-14374077	chr10	+	14373157	14373924	True	NR_031668,NM_018027	chr10,chr10	+,-	MIR1265,FRMD4A	104650,-291
chr10:98269626-98270746	chr10	+	98269735	98270681	True	NM_004088,NM_012465	chr10,chr10	+,-	DNTT,TLL2	-205702,3052
chr15:66797162-66797586	chr15	+	66797170	66797570	True	NM_006049,NM_000968,NR_003105,NR_002440,NR_002441,NR_002442,NR_002443,NM_017975	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,+,-,-,-,-,+	SNAPC5,RPL4,ZWILCH,SNORD16,SNORD18A,SNORD18B,SNORD18C,ZWILCH	-7024,14,-95,-1922,-1518,-2741,-3514,-95
chr1:101373668-101373944	chr1	+	101373691	101373983	True	NM_001439,NM_133496	chr1,chr1	-,+	EXTL2,SLC30A7	-13273,-12108
chr2:34202043-34202903	chr2	+	34202372	34202957	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-463481,-249088
chr1:204463292-204463560	chr1	+	204463343	204463551	True	NM_001204171,NM_002646	chr1,chr1	+,-	MDM4,PIK3C2B	21955,-3869
chr6:15960763-15961757	chr6	+	15960891	15961745	True	NM_013262,NR_036448	chr6,chr6	+,-	MYLIP,DTNBP1	167571,-297602
chrX:153144798-153144999	chrX	+	153144797	153145045	True	NM_000425,NM_001143963,NM_024003,NR_027419	chrX,chrX,chrX,chrX	-,-,-,+	L1CAM,L1CAM,L1CAM,AVPR2	-3398,-3398,-3398,22939
chr3:15224128-15225553	chr3	+	15224240	15225454	True	NR_027927,NM_014296	chr3,chr3	-,+	COL6A4P1,CAPN7	22072,22278
chr3:157153499-157153785	chr3	+	157153554	157153795	True	NM_002852,NM_001167917	chr3,chr3	+,-	PTX3,VEPH1	784,59550
chr16:2508352-2508566	chr16	+	2508551	2508615	True	NM_001048212,NM_025108	chr16,chr16	-,+	CEMP1,C16orf59	72844,1499
chr22:24253722-24254290	chr22	+	24253772	24254246	True	NM_001080843,NM_002415	chr22,chr22	-,+	GSTT2B,MIF	49172,-17258
chr1:201084547-201084925	chr1	+	201084588	201084872	True	NM_000069,NM_001164586	chr1,chr1	-,+	CACNA1S,IGFN1	-2894,75080
chr17:42787261-42788024	chr17	+	42787557	42787919	True	NM_145663,NM_144609,NM_025104,NR_036623	chr17,chr17,chr17,chr17	+,-,+,+	DBF4B,CCDC43,DBF4B,DBF4B	-1639,-20392,-1639,-1639
chr14:38725515-38725731	chr14	+	38725597	38725769	True	NM_001049,NM_175060	chr14,chr14	+,-	SSTR1,CLEC14A	-48444,-23
chr19:39805052-39805263	chr19	+	39805109	39805181	True	NM_172140,NM_020862	chr19,chr19	+,-	IL29,LRFN1	-18195,845
chr5:32445554-32446117	chr5	+	32445557	32446023	True	NM_016107,NM_006713	chr5,chr5	-,+	ZFR,SUB1	-713,139581
chr1:46712770-46713401	chr1	+	46712796	46713438	True	NM_003579,NM_001142548,NR_024332	chr1,chr1,chr1	+,+,-	RAD54L,RAD54L,POMGNT1	-4,-4,-26819
chr1:54618898-54619315	chr1	+	54618903	54619357	True	NM_201546,NM_016491	chr1,chr1	-,+	CDCP2,MRPL37	136,46482
chr6:118228100-118228371	chr6	+	118228195	118228321	True	NM_020399,NM_001029858	chr6,chr6	-,+	GOPC,SLC35F1	-304490,367
chr2:176948365-176948891	chr2	+	176948377	176948771	True	NM_001080458,NM_000523	chr2,chr2	-,+	EVX2,HOXD13	-21,8760
chr22:35869867-35870328	chr22	+	35869868	35870364	True	NM_005368,NM_014310	chr22,chr22	-,+	MB,RASD2	143070,66987
chr10:101537261-101538515	chr10	+	101537420	101538501	True	NM_000392,NM_078470	chr10,chr10	+,-	ABCC2,COX15	3961,-44997
chr18:47722387-47722765	chr18	+	47722419	47722691	True	NM_001039535,NM_001080467	chr18,chr18	+,-	SKA1,MYO5B	178700,-968
chr19:1039242-1039763	chr19	+	1039315	1039749	True	NM_033420,NM_019112	chr19,chr19	-,+	C19orf6,ABCA7	-18174,352
chr8:17663390-17664013	chr8	+	17663406	17664062	True	NM_006197,NM_001001925,NM_001001924	chr8,chr8,chr8	+,-,-	PCM1,MTUS1,MTUS1	116303,-4980,-4980
chr20:31667539-31668139	chr20	+	31667661	31668085	True	NM_182519,NM_080675	chr20,chr20	+,-	C20orf186,SUN5	1232,-75422
chr5:154201940-154202662	chr5	+	154202015	154202579	True	NM_004779,NM_032385	chr5,chr5	+,-	CNOT8,C5orf4	35618,27688
chr10:6189314-6189713	chr10	+	6189382	6189700	True	NM_001145443,NR_036111,NM_000417	chr10,chr10,chr10	+,+,-	PFKFB3,MIR3155,IL2RA	-2590,4458,-85049
chr3:172477527-172478669	chr3	+	172477570	172478436	True	NM_018098,NM_020792	chr3,chr3	+,-	ECT2,NCEH1	-5331,-48562
chr6:51917220-51917839	chr6	+	51917286	51917888	True	NR_029713,NM_138694	chr6,chr6	+,-	MIR206,PKHD1	91258,34585
chr10:61888090-61889229	chr10	+	61888572	61889188	True	NM_001149,NM_001170406	chr10,chr10	-,+	ANK3,CDK1	11637,648900
chr15:49246257-49246896	chr15	+	49246363	49246919	True	NM_014335,NM_203349	chr15,chr15	+,-	EID1,SHC4	-76124,8772
chr8:145027254-145027475	chr8	+	145027280	145027502	True	NM_000837,NR_030383,NM_201379,NM_201381,NM_201380,NM_201382	chr8,chr8,chr8,chr8,chr8,chr8	+,-,-,-,-,-	GRINA,MIR661,PLEC,PLEC,PLEC,PLEC	36723,-7833,636,-8375,-2236,-9170
chr11:112832088-112832605	chr11	+	112832143	112832539	True	NR_034101,NM_001076682,NM_000615,NM_181351	chr11,chr11,chr11,chr11	-,+,+,+	LOC100288346,NCAM1,NCAM1,NCAM1	312134,-199,-199,-199
chr17:43483789-43484408	chr17_ctg5_hap1	+	98925	99569	False	NM_001159330,NM_001113738	chr17_ctg5_hap1,chr17_ctg5_hap1	-,+	ARHGAP27,ARL17A	-340,96151
chr17:43483789-43484408	chr17	+	43483789	43484433	True	NM_001159330,NR_024435	chr17,chr17	-,+	ARHGAP27,LOC100133991	-340,-144288
chr1:226924571-226924786	chr1	+	226924667	226924787	True	NM_002221,NM_000447	chr1,chr1	-,+	ITPKB,PSEN2	2139,133485
chr7:132941215-132941992	chr7	+	132941214	132941996	True	NM_001037126,NM_021807,NM_017812	chr7,chr7,chr7	+,+,-	EXOC4,EXOC4,CHCHD3	-3448,-3448,-174386
chr14:65439858-65440478	chr14	+	65439860	65440338	True	NM_002028,NM_198686	chr14,chr14	+,-	FNTB,RAB15	13168,-985
chr13:103498877-103499395	chr13	+	103498902	103499428	True	NM_000123,NM_024089	chr13,chr13	+,-	ERCC5,KDELC1	-768,-47498
chr3:120314862-120315284	chr3	+	120314882	120315322	True	NM_004547,NM_001168331,NM_000187	chr3,chr3,chr3	+,+,-	NDUFB4,NDUFB4,HGD	53,53,86146
chr19:37861853-37862121	chr19	+	37861901	37862067	True	NM_032453,NM_152484	chr19,chr19	+,-	ZNF527,ZNF569	-9,96322
chr7:5820282-5820540	chr7	+	5820367	5820505	True	NR_023382,NM_207111,NM_207116	chr7,chr7,chr7	+,-,-	ZNF815,RNF216,RNF216	42285,906,906
chr7:108170565-108172054	chr7	+	108170840	108171702	True	NM_015723,NM_012328	chr7,chr7	-,+	PNPLA8,DNAJB9	-4202,38486
chr6:15074180-15074415	chr6	+	15074188	15074406	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	172120,588933
chr19:3539673-3540731	chr19	+	3539678	3539972	True	NM_001135580,NM_001042680	chr19,chr19	+,-	C19orf71,C19orf28	-574,17649
chr17:62007648-62008327	chr17	+	62007694	62008336	True	NM_001164257,NM_001039933,NM_000626,NM_021602	chr17,chr17,chr17,chr17	+,-,-,-	C17orf72,CD79B,CD79B,CD79B	67374,1418,1418,1418
chr3:105586559-105587217	chr3	+	105586585	105587052	True	NM_170662,NM_001627	chr3,chr3	-,+	CBLB,ALCAM	886,-500934
chr3:44808595-44809278	chr3	+	44808636	44809111	True	NM_020242,NM_020696	chr3,chr3	+,-	KIF15,KIAA1143	-5478,-5463
chr11:86123496-86124176	chr11	+	86123546	86124152	True	NM_001014811,NM_021827	chr11,chr11	-,+	ME3,CCDC81	259138,-37819
chr14:103244665-103245088	chr14	+	103244769	103245109	True	NM_145726,NM_152326,NM_001199427,NM_003300,NM_145725	chr14,chr14,chr14,chr14,chr14	+,-,+,+,+	TRAF3,ANKRD9,TRAF3,TRAF3,TRAF3	-1004,-268641,-1004,-1004,-1004
chr15:72668836-72669045	chr15	+	72668840	72669018	True	NR_027262,NM_000520	chr15,chr15	+,-	C15orf34,HEXA	-437,-320
chr2:219469904-219471333	chr2	+	219470178	219470925	True	NM_020935,NM_032726	chr2,chr2	-,+	USP37,PLCD4	-37094,1562
chr1:156738334-156738912	chr1	+	156738395	156738927	True	NM_001126050,NM_005973	chr1,chr1	-,+	HDGF,PRCC	-16155,-1172
chr15:52811691-52811983	chr15	+	52811869	52811939	True	NM_001142495,NM_002748,NM_000259	chr15,chr15,chr15	-,+,-	MYO5A,MAPK6,MYO5A	9368,-500517,9368
chr14:96178802-96179774	chr14	+	96178855	96179811	True	NM_001098725,NM_004918,NM_021966	chr14,chr14,chr14	-,+,-	TCL1A,TCL1B,TCL1A	779,-26152,779
chr21:47470536-47470996	chr21	+	47470579	47470875	True	NM_058174,NM_006657	chr21,chr21	+,-	COL6A2,FTCD	47157,104656
chr8:144974528-144975105	chr8	+	144974577	144974969	True	NM_000837,NM_031308	chr8,chr8	+,-	GRINA,EPPK1	89256,-27143
chr21:44898177-44898551	chr21	+	44898311	44898373	True	NR_026960,NR_026863	chr21,chr21	+,-	C21orf125,C21orf84	-28458,-208
chr12:110170714-110171299	chr12	+	110170714	110171212	True	NM_032829,NR_026661	chr12,chr12	+,-	C12orf34,MGC14436	-18579,40135
chr4:75229832-75230627	chr4	+	75229975	75230565	True	NM_001432,NM_002089	chr4,chr4	+,-	EREG,CXCL2	294,-264978
chr10:11562412-11563672	chr10	+	11562459	11563111	True	NM_001080491,NM_024693	chr10,chr10	-,+	USP6NL,ECHDC3	11221,221244
chr3:42653995-42655584	chr3	+	42654222	42655621	True	NM_001201572,NM_005385	chr3,chr3	-,+	SEC22C,NKTR	-11650,-12126
chr5:172196787-172197276	chr5	+	172196859	172197317	True	NM_004417,NM_001031711	chr5,chr5	-,+	DUSP1,ERGIC1	936,63905
chr17:7808963-7810225	chr17	+	7809108	7810243	True	NR_003000,NR_024349	chr17,chr17	+,-	SCARNA21,LOC284023	-1,9072
chr5:149340934-149341235	chr5	+	149340942	149341263	True	NM_000112,NM_000440	chr5,chr5	+,-	SLC26A2,PDE6A	-698,-16586
chr2:63641442-63643425	chr2	+	63642118	63642991	True	NM_015910,NM_005917	chr2,chr2	-,+	WDPCP,MDH1	172926,172751
chr17:16389981-16391943	chr17	+	16390097	16391639	True	NR_003054,NM_207387,NM_001113567	chr17,chr17,chr17	+,-,-	SNORD65,C17orf76,C17orf76	-45608,3891,3891
chr20:42571693-42572145	chr20	+	42571697	42572185	True	NM_001098798,NM_176791	chr20,chr20	+,-	TOX2,GTSF1L	2350,-216055
chr20:266508-267080	chr20	+	266507	266876	True	NM_033089,NM_153269	chr20,chr20	+,-	ZCCHC3,C20orf96	11327,4569
chr7:6618748-6618990	chr7	+	6618779	6618842	True	NM_001145118,NM_001134387,NM_001134388,NM_001134389,NM_018106	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	GRID2IP,ZDHHC4,ZDHHC4,ZDHHC4,ZDHHC4	-27712,-1768,-1768,-1768,-1768
chr16:16317145-16317368	chr16	+	16317178	16317378	True	NM_001171,NM_001079528,NM_001004067	chr16,chr16,chr16	-,-,+	ABCC6,ABCC6,NOMO3	0,0,9010
chr16:16317145-16317368	chr16	+	14918413	14918613	False	NR_023387,NM_014287	chr16,chr16	-,+	ABCC6P2,NOMO1	-4,9029
chr16:16317145-16317368	chr16	-	18582510	18582710	False	NR_003569,NM_173614,NM_001004060	chr16,chr16,chr16	+,-,-	ABCC6P1,NOMO2,NOMO2	9,-9076,-9076
chr16:10274892-10275376	chr16	+	10275090	10275364	True	NM_024997,NM_001134408,NM_001134407,NM_000833	chr16,chr16,chr16,chr16	+,-,-,-	ATF7IP2,GRIN2A,GRIN2A,GRIN2A	247360,610,949,1297
chr3:8607682-8609217	chr3	+	8607727	8609091	True	NR_024065,NR_033378	chr3,chr3	+,-	LOH3CR2A,LOC100288428	4376,-64383
chrX:8699183-8699456	chrX	+	8699187	8699399	True	NM_001001888,NM_000216	chrX,chrX	+,-	VCX3B,KAL1	-266367,878
chr11:63953303-63953629	chr11	+	63953327	63953585	True	NM_006819,NM_014067	chr11,chr11	+,-	STIP1,MACROD1	1,-19742
chr20:31821753-31822749	chr20	+	31821766	31822344	True	NM_016583,NM_016082,NM_130852	chr20,chr20,chr20	+,-,+	PLUNC,CDK5RAP1,PLUNC	1457,167043,1457
chrX:30249850-30250248	chrX	+	30250003	30250267	True	NM_000475,NM_002365,NM_002367	chrX,chrX,chrX	-,+,+	NR0B1,MAGEB3,MAGEB4	77278,-1501,9789
chr17:62971607-62971949	chr17	+	62971626	62971888	True	NR_026903,NM_001165933	chr17,chr17	-,+	AMZ2P1,RGS9	19,161567
chr7:101270852-101271188	chr7	+	101270851	101271215	True	NM_138403,NM_001202543	chr7,chr7	-,+	MYL10,CUX1	1411,187968
chr1:15944440-15944824	chr1	+	15944613	15944835	True	NM_032341,NM_024758	chr1,chr1	+,-	DDI2,AGMAT	-711,-33008
chr4:110791015-110791541	chr4	+	110791014	110791560	True	NM_000204,NM_198506	chr4,chr4	-,+	CFI,LRIT3	-67679,-18579
chr19:49625190-49625496	chr19	+	49625196	49625324	True	NM_018111,NM_003660,NM_022165	chr19,chr19,chr19	-,+,+	C19orf73,PPFIA3,LIN7B	-2799,-2584,-7629
chr21:43528381-43528700	chr21	+	43528491	43528717	True	NM_173568,NR_027243	chr21,chr21	+,-	UMODL1,C21orf128	-37116,3
chr3:148576079-148577225	chr3	+	148576382	148577244	True	NM_001870,NM_003071	chr3,chr3	+,-	CPA3,HLTF	5798,227149
chr7:44922690-44924125	chr7	+	44922972	44924109	True	NM_033224,NM_021130	chr7,chr7	-,+	PURB,PPIA	901,-86782
chr7:98973607-98974585	chr7	+	98973988	98974600	True	NM_005720,NM_014891	chr7,chr7	+,-	ARPC1B,PDAP1	-1741,31755
chr7:44366262-44367134	chr7	+	44366356	44366984	True	NM_172078,NM_172079,NM_172081,NM_172080,NM_172083,NM_172082,NM_172084,NM_001220,NM_006555	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,-,-,-,+	CAMK2B,CAMK2B,CAMK2B,CAMK2B,CAMK2B,CAMK2B,CAMK2B,CAMK2B,YKT6	-1126,-1126,-1126,-1126,-1126,-1126,-1126,-1126,-125829
chrX:154027168-154028872	chrX	+	154027453	154028915	True	NM_001166462,NR_002984,NM_001166460,NM_001166461,NM_002436	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	MPP1,SNORA56,MPP1,MPP1,MPP1	4938,-24235,4938,4938,4938
chr16:30661330-30661567	chr16	+	30661488	30661596	True	NM_138447,NM_024031	chr16,chr16	-,+	ZNF689,PRR14	-39806,644
chr4:110737015-110737937	chr4	+	110737101	110737876	True	NM_018983,NM_000204,NM_032993	chr4,chr4,chr4	+,-,+	GAR1,CFI,GAR1	-486,-13766,-486
chr1:205198606-205198920	chr1	+	205198618	205198962	True	NM_014858,NM_199462	chr1,chr1	+,-	TMCC2,DSTYK	-1631,-17891
chrX:41547065-41548242	chrX	+	41547286	41548276	True	NM_005300,NM_001126054,NM_001097579	chrX,chrX,chrX	+,-,+	GPR34,CASK,GPR34	-51,234061,-51
chr5:88201403-88202429	chr7	-	66798479	66799112	False	NM_022906,NR_022007	chr7,chr7	+,-	STAG3L4,PMS2P4	-30914,-31073
chr5:88201403-88202429	chr5	+	88201481	88202473	True	NM_001193347,NM_006467,NM_001131005	chr5,chr5,chr5	-,+,-	MEF2C,POLR3G,MEF2C	-1559,1568207,-1559
chr7:44510200-44511395	chr7	+	44510430	44511430	True	NM_015332,NM_001003941	chr7,chr7	-,+	NUDCD3,OGDH	19005,134690
chr3:139189464-139191296	chr3	+	139189771	139191033	True	NM_004164,NM_020191	chr3,chr3	-,+	RBP2,MRPS22	4369,-126961
chr7:96653352-96653681	chr7	+	96653361	96653715	True	NM_005221,NM_005222,NR_015448	chr7,chr7,chr7	-,+,-	DLX5,DLX6,DLX6-AS1	478,-18122,-9984
chr7:134835530-134836245	chr7	+	134835693	134836243	True	NM_018295,NM_024033	chr7,chr7	+,-	TMEM140,C7orf49	-2992,19339
chr8:15092618-15094249	chr8	+	15092655	15094035	True	NM_139167,NM_006765	chr8,chr8	-,+	SGCZ,TUSC3	1807,303560
chr1:46806657-46806995	chr1	+	46806662	46806868	True	NM_006369,NM_199044	chr1,chr1	-,+	LRRC41,NSUN4	-37624,-323
chr14:55370241-55370692	chr14	+	55370323	55370560	True	NM_001024070,NM_001024071,NM_001024024,NM_000161,NM_080867	chr14,chr14,chr14,chr14,chr14	-,-,-,-,+	GCH1,GCH1,GCH1,GCH1,SOCS4	-781,-781,-781,-781,123283
chr18:44674453-44676279	chr18	+	44674647	44676292	True	NM_032124,NM_031303	chr18,chr18	-,+	HDHD2,KATNAL2	636,-147921
chr1:156589235-156589640	chr1	+	156589240	156589684	True	NM_182679,NM_021817	chr1,chr1	-,+	GPATCH4,HAPLN2	-17961,-205
chrX:77566906-77568090	chrX	+	77566911	77568119	True	NM_006639,NM_000291	chrX,chrX	-,+	CYSLTR1,PGK1	15030,-207301
chr14:39583596-39584751	chr14	+	39583741	39584254	True	NM_006364,NM_003616,NM_001009183,NM_001009182	chr14,chr14,chr14,chr14	-,+,+,+	SEC23A,SIP1,SIP1,SIP1	-11304,-304,-304,-304
chr3:179711584-179713455	chr3	+	179711848	179713500	True	NM_003940,NM_016559	chr3,chr3	+,-	USP13,PEX5L	-340979,41069
chr7:150211818-150212705	chr7	+	150211919	150212731	True	NM_024711,NM_153236	chr7,chr7	-,+	GIMAP6,GIMAP7	116999,-25
chr6:144607729-144608033	chr6	+	144607766	144607974	True	NM_007124,NM_031287	chr6,chr6	+,-	UTRN,SF3B5	4898,-191012
chr1:202939616-202940377	chr1	+	202939784	202940083	True	NM_016243,NM_138391	chr1,chr1	-,+	CYB5R1,TMEM183A	-3380,36450
chr10:26881858-26882906	chr10	+	26881871	26882895	True	NM_001012750,NR_026793	chr10,chr10	-,+	ABI1,NCRNA00264	267171,-3130
chrX:32313482-32314228	chrX	+	32313482	32314216	True	NM_004011,NM_203391	chrX,chrX	-,+	DMD,GK	116212,-1642065
chr12:57703714-57705311	chr12	+	57704027	57704947	True	NM_014925,NM_001166357	chr12,chr12	-,+	R3HDM2,SHMT2	-25,-79935
chr19:58739945-58740186	chr19	+	58740019	58740227	True	NM_014480,NM_024620	chr19,chr19	+,-	ZNF544,ZNF329	0,-77871
chr13:52001773-52002753	chr13	+	52001830	52002284	True	NM_001039937,NM_001101320	chr13,chr13	-,+	INTS6,SERPINE3	25041,-86723
chr7:45615545-45615871	chr7	+	45615656	45615716	True	NM_021116,NR_024271	chr7,chr7	+,-	ADCY1,SEPT7P2	-1582,192951
chr17:15589912-15591487	chr17	+	15590120	15591219	True	NM_006470,NM_001130842	chr17,chr17	-,+	TRIM16,ZNF286A	-3927,11671
chr17:15589912-15591487	chr17	-	18597734	18598339	False	NM_001145045,NM_001037330	chr17,chr17	-,+	ZNF286B,TRIM16L	-12162,27062
chr16:23849038-23850112	chr16	+	23849248	23850043	True	NM_212535,NM_033266,NM_002738	chr16,chr16,chr16	+,-,+	PRKCB,ERN2,PRKCB	-2000,-124427,-2000
chr20:48728727-48729111	chr20	+	48728809	48729091	True	NM_021988,NM_001032288,NM_022442,NM_005194,NM_199144	chr20,chr20,chr20,chr20,chr20	-,-,-,+,-	UBE2V1,UBE2V1,UBE2V1,CEBPB,UBE2V1	3453,669,3450,78284,3453
chr19:57792195-57792710	chr19	+	57792288	57792748	True	NM_001012729,NM_006635	chr19,chr19	-,+	DUXA,ZNF460	-113432,-492
chr2:114387408-114389155	chr22	-	51219143	51219471	False	NM_001003789,NM_001130919,NM_001130920,NM_001130921,NM_001130922,NM_001130923	chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,-,-	RABL2B,RABL2B,RABL2B,RABL2B,RABL2B,RABL2B	2667,2667,2667,2667,2667,2667
chr2:114387408-114389155	chr2	+	114387429	114388912	True	NM_007082,NR_000029,NM_013412,NR_024529,NR_024528,NR_024530,NR_024531	chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,-,+,-,-,-,-	RABL2A,RPL23AP7,RABL2A,RPL23AP7,RPL23AP7,RPL23AP7,RPL23AP7	-2664,-2714,-2664,-2714,-2714,-2714,-2714
chr3:184278876-184279230	chr3	+	184278926	184279154	True	NM_022149,NM_004443	chr3,chr3	-,+	MAGEF1,EPHB3	150732,432
chr21:43439834-43440039	chr21	+	43439861	43440005	True	NR_027273,NM_020727,NM_001098402,NM_001098403	chr21,chr21,chr21,chr21	+,-,-,-	C21orf121,ZNF295,ZNF295,ZNF295	2107,-9365,-9365,-9365
chr19:55879751-55880346	chr19	+	55880056	55880364	True	NM_000641,NM_001145402,NM_139172	chr19,chr19,chr19	-,-,+	IL11,FAM71E2,TMEM190	1500,-5436,7839
chr6:41705659-41706085	chr6	+	41705681	41705837	True	NM_001167827,NM_007162,NM_013397,NM_001166424,NM_002630	chr6,chr6,chr6,chr6,chr6	-,-,+,-,-	TFEB,TFEB,PRICKLE4,PGC,PGC	-1684,-2883,42662,9352,9352
chr15:34658834-34659055	chr15	+	34658839	34659017	True	NM_175741,NM_153613	chr15,chr15	+,-	C15orf55,LPCAT4	-20824,428
chr11:9018034-9018844	chr11	+	9018258	9018330	True	NM_182901,NM_020645	chr11,chr11	+,-	C11orf17,NRIP3	-85513,7316
chr12:93866544-93867366	chr12	+	93866544	93866967	True	NM_003348,NM_014050,NM_172177,NM_172178	chr12,chr12,chr12,chr12	-,+,+,+	UBE2N,MRPL42,MRPL42,MRPL42	-30518,-5333,-5333,-5333
chr10:96576089-96577490	chr10	+	96576142	96576248	True	NM_000770,NM_000769	chr10,chr10	-,+	CYP2C8,CYP2C19	253064,-53740
chr12:30904489-30905149	chr12	+	30904538	30905197	True	NM_023925,NM_001002259,NM_032156,NM_001080509	chr12,chr12,chr12,chr12	-,-,-,+	CAPRIN2,CAPRIN2,CAPRIN2,TSPAN11	2301,2301,2301,174640
chr13:51916137-51916403	chr13	+	51916211	51916419	True	NM_001039937,NM_001101320	chr13,chr13	-,+	INTS6,SERPINE3	110906,-1094
chr6:27782450-27782978	chr6	+	27782500	27783027	True	NM_003536,NM_003521,NM_021066,NM_021968,NM_003509,NM_003519	chr6,chr6,chr6,chr6,chr6,chr6	+,+,-,+,+,-	HIST1H3H,HIST1H2BM,HIST1H2AJ,HIST1H4J,HIST1H2AI,HIST1H2BL	-4709,57,12,8875,-6574,-6791
chr3:12522326-12523712	chr3	+	12522399	12523535	True	NM_001195279,NM_025265,NM_001145393,NM_001145392,NM_001145395,NM_001145394	chr3,chr3,chr3,chr3,chr3,chr3	-,+,+,+,+,+	LOC100129480,TSEN2,TSEN2,TSEN2,TSEN2,TSEN2	63492,2474,2395,2474,2474,2395
chr4:3369595-3370751	chr4	+	3369625	3370653	True	NM_002337,NM_198227	chr4,chr4	-,+	LRPAP1,RGS12	163621,1070
chrX:102944759-102945676	chrX	+	102944973	102945714	True	NM_001142419,NM_001142418,NM_012286,NM_001142432,NM_001142430,NM_001142431,NM_001142420,NM_001142421,NM_001142422,NM_001142423,NM_001142424,NM_001142425,NM_001142426,NM_001142427,NM_001142428,NM_001142429,NM_182541	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,+	MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,TMEM31	-1887,-3227,-3227,-1887,-3227,-1887,-1887,-1887,-1887,-3227,-3227,-3227,-3227,-1887,-1887,-3227,20122
chr5:140811168-140811603	chr5	+	140811167	140811587	True	NM_005642,NR_001297,NM_032094,NM_003735	chr5,chr5,chr5,chr5	-,+,+,+	TAF7,PCDHGB8P,PCDHGA12,PCDHGA12	-110816,-5365,-1060,-1060
chrX:152158593-152159084	chrX	+	152158601	152159063	True	NM_001184924,NM_001178115,NM_052926,NM_001103151,NM_001103150	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	PNMA5,ZNF185,PNMA5,PNMA5,PNMA5	3658,-48437,1748,1748,1748
chr1:46935480-46935968	chr1	+	46935722	46935941	True	NM_147192,NM_001097611	chr1,chr1	+,-	DMBX1,KNCN	36726,80997
chr4:76949681-76951300	chr4	+	76949887	76951132	True	NM_005409,NM_001565,NM_001130017	chr4,chr4,chr4	-,-,+	CXCL11,CXCL10,ART3	6276,-5198,-17601
chr22:35588438-35590102	chr22	+	35588589	35590146	True	NM_001003681,NM_005368	chr22,chr22	+,-	HMGXB4,MB	63298,423288
chr11:61060567-61061261	chr11	+	61060993	61061301	True	NM_015533,NM_152718	chr11,chr11	+,-	DAK,VWCE	39352,1537
chr22:44966832-44967063	chr22	+	44966855	44967039	True	NR_028409,NM_032287,NR_028411,NR_028410	chr22,chr22,chr22,chr22	+,-,+,+	NCRNA00207,LDOC1L,NCRNA00207,NCRNA00207	-1686,-72850,-1686,-1686
chr11:71257986-71258282	chr11	+	71257991	71258323	True	NM_021046,NM_005553,NM_001005405	chr11,chr11,chr11	+,+,-	KRTAP5-8,KRTAP5-9,KRTAP5-11	-8971,1142,35648
chr19:9697925-9699578	chr19	+	9698101	9699335	True	NM_001008727,NM_001172651	chr19,chr19	-,+	ZNF121,ZNF177	-2892,-211160
chr3:69101661-69102186	chr3	+	69101696	69102166	True	NM_007114,NR_036087,NM_006407	chr3,chr3,chr3	-,-,+	TMF1,MIR3136,ARL6IP5	-212,-3510,31923
chr12:124442893-124444010	chr12	+	124442928	124443862	True	NM_025140,NM_001204298	chr12,chr12	-,+	CCDC92,ZNF664	13351,13899
chr10:124165827-124166485	chr10	+	124165977	124166503	True	NM_001010912,NR_037506	chr10,chr10	-,+	C10orf120,MIR3941	292891,9977
chr6:139299672-139300039	chr6	+	139299773	139300014	True	NM_001128617,NM_031922,NM_021243	chr6,chr6,chr6	-,-,+	REPS1,REPS1,C6orf115	9439,9439,49804
chr15:82337372-82337611	chr15	+	82337377	82337605	True	NM_032246,NM_001008226	chr15,chr15	-,+	MEX3B,FAM154B	806,217546
chr6:58283315-58284124	chr6	+	58283753	58284163	True	NM_000947,NR_003660	chr6,chr6	+,-	PRIM2,GUSBP4	-1101388,3611
chr6:58283315-58284124	chr5	-	37383125	37383300	False	NM_153485,NM_018034	chr5,chr5	-,+	NUP155,WDR70	-11928,-3875
chr2:99551920-99552194	chr2	+	99551957	99552143	True	NM_207362,NM_144706	chr2,chr2	-,+	C2orf55,C2orf15	591,206041
chr9:125485912-125486633	chr9	+	125485998	125486587	True	NM_001004450,NM_001005235	chr9,chr9	-,+	OR1B1,OR1L4	-94184,8
chr3:48662769-48663842	chr3	+	48662870	48663866	True	NM_134263,NM_022911,NM_134426,NM_033629,NM_001040454,NM_001008269	chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,+,-,-	SLC26A6,SLC26A6,SLC26A6,TREX1,SLC26A6,TMEM89	9110,9110,9110,-155692,7463,-3681
chr14:94594385-94595101	chr14	+	94594409	94595141	True	NM_032036,NM_005532	chr14,chr14	-,+	IFI27L2,IFI27	866,-17381
chr19:39107110-39107740	chr19	+	39107292	39107596	True	NM_013234,NM_007181,NM_001042600	chr19,chr19,chr19	+,-,-	EIF3K,MAP4K1,MAP4K1	2125,1097,1097
chr3:42916636-42917158	chr3	+	42916669	42917185	True	NM_207404,NM_004391	chr3,chr3	+,-	ZNF662,CYP8B1	30216,498
chr18:55285069-55287041	chr18	+	55285571	55286935	True	NM_004852,NM_004539	chr18,chr18	+,-	ONECUT2,NARS	-182705,2299
chr2:54554561-54556026	chr2	+	54554667	54555864	True	NM_001003937,NM_001100396	chr2,chr2	-,+	TSPYL6,C2orf73	-71258,2206
chr19:47986685-47987033	chr19	+	47986693	47987033	True	NM_015711,NM_007059	chr19,chr19	+,-	GLTSCR1,KPTN	124419,538
chr4:110735686-110736640	chr4	+	110735861	110736683	True	NM_018983,NM_000204,NM_032993	chr4,chr4,chr4	+,-,+	GAR1,CFI,GAR1	-18,-12526,-18
chr8:7306563-7308219	chr8	+	7306934	7308234	True	NM_058206,NM_058207,NM_001040703	chr8,chr8,chr8	-,-,+	SPAG11B,SPAG11B,DEFB105B	1703,1703,37008
chr8:7306563-7308219	chr8	-	7718355	7719352	False	NM_152250,NM_058203	chr8,chr8	-,+	DEFB105A,SPAG11B	-36995,-13004
chr3:128918501-128919398	chr3	+	128918500	128919032	True	NM_003418,NM_016128	chr3,chr3	-,+	CNBP,COPG	-15690,49420
chr14:35856892-35858759	chr14	+	35856958	35858522	True	NM_002791,NM_020529	chr14,chr14	+,-	PSMA6,NFKBIA	-95436,15488
chr6:144165684-144166643	chr6	+	144165742	144166481	True	NM_001080952,NM_032860	chr6,chr6	-,+	PLAGL1,LTV1	163111,-1290
chr11:2397560-2397771	chr11	+	2397615	2397753	True	NM_004356,NM_014555	chr11,chr11	+,-	CD81,TRPM5	793,46572
chr7:74865209-74865683	chr7	+	74865216	74865698	True	NM_001145064,NR_003664	chr7,chr7	-,+	GATSL2,SPDYE8P	1693,70834
chr7:74865209-74865683	chr7	-	72570993	72571475	False	NR_002206,NR_003664,NR_003580	chr7,chr7,chr7	+,-,+	GTF2IP1,SPDYE8P,LOC100093631	-2018,-70684,-2032
chr7:74865209-74865683	chr7	-	74380751	74381233	False	NM_001025202,NM_001145063	chr7,chr7	-,+	STAG3L2,GATSL1	-74020,-1719
chr7:74865209-74865683	chr7	+	74650999	74651481	False	NR_002206,NM_001003795,NR_003580	chr7,chr7,chr7	-,+,-	GTF2IP1,GTF2IRD2B,LOC100093631	2014,-142703,2028
chr3:43750025-43750387	chr3	+	43750024	43750402	True	NM_001204834,NM_016006	chr3,chr3	-,+	ANO10,ABHD5	-86464,-17705
chr9:6720551-6721577	chr9	+	6720739	6721064	True	NM_000170,NM_001146696	chr9,chr9	-,+	GLDC,KDM4C	-75047,12
chr3:183543860-183544541	chr3	+	183543887	183544445	True	NM_024871,NM_018023	chr3,chr3	-,+	MAP6D1,YEATS2	-494,-128332
chr7:2672585-2672806	chr7	+	2672588	2672822	True	NM_152743,NM_025250	chr7,chr7	-,+	BRAT1,TTYH3	-77196,-1036
chr17:27074129-27074335	chr17	+	27074220	27074350	True	NM_004295,NM_001160407	chr17,chr17	+,-	TRAF4,TLCD1	-3248,-20271
chr18:7566167-7566650	chr18	+	7566175	7566547	True	NM_005559,NM_002845,NM_001105244	chr18,chr18,chr18	-,+,+	LAMA1,PTPRM,PTPRM	-448362,766,766
chr2:234756464-234756970	chr2	+	234756557	234756929	True	NM_018410,NM_024080	chr2,chr2	-,+	HJURP,TRPM8	6333,69113
chr8:145837029-145838209	chr8	+	145837029	145837152	True	NM_014665,NM_025251	chr8,chr8	+,-	LRRC14,ARHGAP39	-93723,1786
chr14:77350688-77350916	chr14	+	77350904	77350964	True	NM_015305,NM_194287	chr14,chr14	-,+	ANGEL1,C14orf166B	-71621,-58230
chr6:390735-391043	chr6	+	390893	390993	True	NM_148959,NM_002460,NM_001195286,NR_036585	chr6,chr6,chr6,chr6	-,+,+,+	HUS1B,IRF4,IRF4,IRF4	266021,745,745,745
chr1:45966595-45967983	chr1	+	45966599	45967573	True	NM_007170,NR_033297,NR_033296,NR_033298,NM_015506	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	TESK2,CCDC163P,CCDC163P,CCDC163P,MMACHC	-9759,-848,-848,-848,-794
chr19:7587645-7587901	chr19	+	7587754	7587888	True	NM_018083,NM_080662,NM_020533	chr19,chr19,chr19	+,-,+	ZNF358,PEX11G,MCOLN1	-6801,-33849,-309
chr19:35635938-35636251	chr19	+	35635937	35636207	True	NM_022006,NM_139284,NM_005031,NM_021902,NM_144779,NM_001164605,NM_014164,NR_028406	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+,+,+	FXYD7,LGI4,FXYD1,FXYD1,FXYD5,FXYD5,FXYD5,FXYD5	-1834,-9759,-5596,-6256,9464,9637,9417,9464
chr1:109291173-109292913	chr1	+	109291483	109292711	True	NM_144584,NM_007269	chr1,chr1	-,+	HENMT1,STXBP3	-87335,-2257
chr17:19553517-19553812	chr17	+	19553516	19553598	True	NM_001099646,NM_000382,NM_001031806	chr17,chr17,chr17	-,+,+	SLC47A2,ALDH3A2,ALDH3A2	66501,-1504,-1504
chr19:17624510-17624841	chr19	+	17624628	17624822	True	NM_012088,NM_001098524,NM_173544,NM_138454	chr19,chr19,chr19,chr19	+,+,+,-	PGLS,FAM129C,FAM129C,NXNL1	-2252,9287,9287,-52903
chr18:30090744-30091447	chr18	+	30090820	30091414	True	NR_003558,NM_022751	chr18,chr18	+,-	WBP11P1,FAM59A	211,-40373
chr16:70721331-70721694	chr16	+	70721382	70721586	True	NM_001172772,NM_138383	chr16,chr16	+,-	IL34,MTSS1L	-63538,-1428
chr3:45835304-45835513	chr3	+	45835354	45835514	True	NM_006641,NM_020208,NM_022405	chr3,chr3,chr3	+,-,-	CCR9,SLC6A20,SLC6A20	92481,2571,2571
chr19:43833951-43835073	chr19	+	43834185	43834941	True	NR_026881,NM_002784	chr19,chr19	+,-	PRG1,PSG9	18266,-60503
chr1:92766779-92768315	chr1	+	92767029	92768145	True	NM_053274,NM_024813	chr1,chr1	-,+	GLMN,RPAP2	-2463,-2571
chr12:120637707-120637987	chr12	+	120637765	120637940	True	NM_053275,NM_012240,NM_006836,NM_001002	chr12,chr12,chr12,chr12	-,+,-,-	RPLP0,SIRT4,GCN1L1,RPLP0	1125,102183,-5252,1125
chr3:138064500-138064902	chr3	+	138064501	138064722	True	NM_012219,NM_001085049,NM_178130	chr3,chr3,chr3	+,+,-	MRAS,MRAS,TXNDC6	1902,2785,-15773
chr16:33725184-33725584	chr16	+	33725216	33725490	True	NR_033866,NM_001205265	chr16,chr16	-,+	LOC390705,TP53TG3B	-426514,-463156
chr19:46999442-46999684	chr19	+	46999489	46999725	True	NM_005184,NM_020709	chr19,chr19	+,-	CALM3,PNMAL2	104786,-320
chr4:109572722-109574117	chr4	+	109572734	109573798	True	NR_026968,NM_021227	chr4,chr4	-,+	LOC285456,OSTC	-31121,-1044
chr2:166927501-166928120	chr2	+	166927515	166927904	True	NM_006920,NM_001165964,NM_024969,NM_001165963	chr2,chr2,chr2,chr2	-,-,+,-	SCN1A,SCN1A,CSRNP3,SCN1A	2307,2307,-498720,2307
chr19:3871607-3871855	chr19	+	3871611	3871737	True	NM_001145640,NM_033064,NM_015174,NR_027149	chr19,chr19,chr19,chr19	-,+,-,-	ZFR2,ATCAY,ZFR2,ZFR2	-2584,8880,-2584,-2584
chr21:39491488-39492674	chr21	+	39491488	39492494	True	NR_026842,NR_026839,NR_026840,NR_026841,NR_026838,NM_005867	chr21,chr21,chr21,chr21,chr21,chr21	+,+,+,+,+,-	DSCR8,DSCR8,DSCR8,DSCR8,DSCR8,DSCR4	1050,1050,1050,1050,1050,1010
chr14:99181597-99182363	chr14	+	99181679	99182319	True	NM_022898,NM_182560	chr14,chr14	-,+	BCL11B,C14orf177	555553,-3794
chr22:41635617-41636064	chr22	+	41635639	41636005	True	NM_138481,NM_031488	chr22,chr22	-,+	CHADL,L3MBTL2	980,-34377
chr16:10970097-10971153	chr16	+	10970256	10971076	True	NM_000246,NM_001079512	chr16,chr16	+,-	CIITA,FAM18A	-22,-57635
chr9:70982077-70983300	chr2	+	114310743	114310793	True	NR_026821,NR_024005	chr2,chr2	+,-	FAM138B,DDX11L2	24165,48410
chr9:70982077-70983300	chr9	+	70982109	70983333	False	NR_015423,NM_021965	chr9,chr9	-,+	LOC572558,PGM5	-9352,-10346
chr9:70982077-70983300	chr9	-	69136913	69136977	False	NR_002836,NM_001098805	chr9,chr9	-,+	PGM5P2,ANKRD20A4	10941,245003
chr19:17325559-17325848	chr19	+	17325567	17325897	True	NM_005234,NM_018467	chr19,chr19	-,+	NR2F6,USE1	30304,257
chr14:65568964-65569241	chr14	+	65569009	65569081	True	NM_002028,NM_197957,NM_145113,NM_145112,NM_145114,NM_145116,NM_002382	chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,-,-,-,-,-,-	FNTB,MAX,MAX,MAX,MAX,MAX,MAX	-115553,196,196,196,196,196,196
chr9:116177582-116177870	chr9	+	116177638	116177808	True	NM_017443,NR_027261,NM_152786	chr9,chr9,chr9	-,-,+	POLE3,POLE3,C9orf43	-4609,-4683,-4676
chr5:70883472-70883950	chr5	+	70883479	70883822	True	NM_022132,NR_033968	chr5,chr5	+,-	MCCC2,LOC100049076	-415,-328357
chr7:100034208-100034626	chr7	+	100034348	100034446	True	NM_001194992,NM_001194991,NM_001194990,NM_019606,NM_017984,NM_145030	chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,-,-	MEPCE,MEPCE,MEPCE,MEPCE,ZCWPW1,C7orf47	-7986,-7986,-7986,-7145,-8046,-254
chr2:136287943-136288251	chr2	+	136288016	136288277	True	NM_015361,NM_032143	chr2,chr2	+,-	R3HDM1,ZRANB3	805,579
chr19:41440891-41441402	chr19	+	41440965	41441121	True	NM_030589,NR_001278	chr19,chr19	-,+	CYP2A7,CYP2B7P1	-52308,-10847
chr22:43508498-43508765	chr22	+	43508583	43508735	True	NM_001197,NR_027779	chr22,chr22	+,-	BIK,TTLL1	-1884,-23149
chr15:41406387-41406708	chr15	+	41406487	41406639	True	NM_017553,NM_007236	chr15,chr15	-,+	INO80,CHP	1759,116797
chr1:169554184-169555444	chr1	+	169554266	169555464	True	NM_018186,NM_000130	chr1,chr1	+,-	C1orf112,F5	209085,355
chr3:51572354-51572605	chr3	+	51572357	51572585	True	NM_015106,NM_014703	chr3,chr3	+,-	RAD54L2,VPRBP	3010,-38339
chr17:41855227-41855633	chr17	+	41855561	41855621	True	NM_004090,NM_001136483	chr17,chr17	-,+	DUSP3,C17orf105	797,2181
chr9:115480688-115482615	chr9	+	115480745	115482422	True	NM_001012994,NM_021218	chr9,chr9	+,-	SNX30,C9orf80	30711,-358
chr15:59397708-59398238	chr15	+	59397714	59398252	True	NM_004701,NR_031750	chr15,chr15	+,-	CCNB2,MIR2116	-445,65259
chr1:244614625-244614846	chr1	+	244614631	244614881	True	NM_173807,NM_001126,NM_001130957	chr1,chr1,chr1	+,-,+	C1orf101,ADSS,C1orf101	9791,605,9791
chr7:66326264-66326826	chr7	+	66326509	66326849	True	NR_003934,NM_017994	chr7,chr7	-,+	LOC729156,C7orf42	-16696,59353
chr5:31194798-31196566	chr5	+	31194887	31196606	True	NM_004932,NM_001100412	chr5,chr5	+,-	CDH6,DROSHA	-1142,335726
chr16:55690770-55691752	chr16	+	55690784	55691751	True	NM_001025194,NM_001172501,NM_001043,NM_001172504	chr16,chr16,chr16,chr16	-,+,+,+	CES1,SLC6A2,SLC6A2,SLC6A2	175375,-1293,-483,-279
chr3:4794137-4794439	chr3	+	4794187	4794331	True	NR_004428,NM_003670	chr3,chr3	-,+	EGOT,BHLHE40	-913,226765
chr16:1346921-1348022	chr16	+	1347131	1347685	True	NM_194261,NM_001001410	chr16,chr16	+,-	UBE2I,C16orf42	11494,54238
chr19:43857272-43857957	chr19	+	43857788	43857994	True	NM_020406,NR_026881,NM_002784	chr19,chr19,chr19	+,+,-	CD177,PRG1,PSG9	-14,-4631,-84106
chr15:45249217-45249862	chr15	+	45249467	45249897	True	NM_014080,NM_152448	chr15,chr15	-,+	DUOX2,C15orf43	156512,-623
chr10:96701985-96703489	chr10	+	96702102	96703429	True	NM_000771,NM_000770	chr10,chr10	+,-	CYP2C9,CYP2C8	-3738,125878
chr7:123174979-123175801	chr7	+	123175296	123175505	True	NM_080928,NM_178827	chr7,chr7	+,-	ASB15,IQUB	73606,-578
chr8:39767985-39769933	chr8	+	39768101	39769629	True	NM_001464,NM_002164	chr8,chr8	-,+	ADAM2,IDO1	-72322,1698
chr1:169599752-169600144	chr1	+	169599812	169600170	True	NM_003005,NM_018186	chr1,chr1	-,+	SELP,C1orf112	-435,164379
chr18:43188404-43190372	chr18	+	43188450	43190276	True	NM_007163,NM_020964	chr18,chr18	+,-	SLC14A2,EPG5	4489,357079
chr17:75880191-75881091	chr17	+	75880276	75881048	True	NM_001142640,NR_028337	chr17,chr17	+,-	TNRC6C,FLJ45079	119269,-107
chr6:88127749-88127992	chr6	+	88127760	88128018	True	NM_001031743,NM_198568	chr6,chr6	+,-	C6orf165,GJB7	-10128,-88764
chrX:101802434-101802886	chrX	+	101802486	101802802	True	NR_002216,NM_021992	chrX,chrX	+,-	NXF4,TMSB15A	2090,-30787
chr13:52768674-52768947	chr13	+	52768718	52768868	True	NR_002816,NM_021645	chr13,chr13	-,+	THSD1P1,UTP14C	-116,-169942
chr19:6112340-6113674	chr19	+	6112396	6113618	True	NM_000635,NM_030924,NM_134433	chr19,chr19,chr19	-,+,-	RFX2,ACSBG2,RFX2	-1732,22091,-1732
chr15:99060170-99061623	chr15	+	99060364	99061423	True	NM_182562,NM_000875	chr15,chr15	-,+	FAM169B,IGF1R	-2753,131337
chr9:77112529-77112834	chr9	+	77112668	77112834	True	NM_006914,NM_001177311	chr9,chr9	+,-	RORB,TRPM6	-468,389479
chr2:32503442-32504127	chr2	+	32503482	32504044	True	NM_032312,NM_021209	chr2,chr2	+,-	YIPF4,NLRC4	-575,-12670
chr5:121414632-121415304	chr5	+	121414646	121415261	True	NM_002317,NM_207317,NM_001178102	chr5,chr5,chr5	-,+,-	LOX,ZNF474,LOX	-591,49953,-1728
chr9:127624026-127624268	chr9	+	127624028	127624212	True	NM_007209,NM_030978,NM_001045476	chr9,chr9,chr9	-,+,+	RPL35,ARPC5L,WDR38	78,7271,-8324
chr12:51345559-51346504	chr12	+	51345730	51346545	True	NM_001109619,NM_001174130	chr12,chr12	+,-	HIGD1C,SLC11A2	1236,56558
chr13:113813777-113814245	chr13	+	113813858	113814114	True	NM_001127202,NM_003891	chr13,chr13	-,+	PCID2,PROZ	48965,-941
chrX:127185280-127185483	chrX	+	127185279	127185481	True	NM_138289,NM_001122716	chrX,chrX	-,+	ACTRT1,CXorf64	951,-1231584
chr3:190152599-190153551	chr3	+	190152970	190153582	True	NM_207316,NM_006580	chr3,chr3	-,+	TMEM207,CLDN16	14133,-47360
chr19:47550818-47551460	chr19	+	47551123	47551433	True	NM_002517,NM_017854	chr19,chr19	+,-	NPAS1,TMEM160	-27031,499
chr3:42449618-42449964	chr3	+	42449617	42450013	True	NM_004624,NM_144634	chr3,chr3	+,-	VIPR1,LYZL4	94090,2102
chr3:123681098-123682255	chr3	+	123681119	123682262	True	NR_028136,NM_022757	chr3,chr3	+,-	KALRN,CCDC14	131295,-864
chr10:13274869-13275452	chr10	+	13274992	13275418	True	NM_145314,NM_182751	chr10,chr10	-,+	UCMA,MCM10	960,-71489
chr3:57113445-57113700	chr3	+	57113471	57113701	True	NM_181727,NM_001128615	chr3,chr3	+,-	SPATA12,ARHGEF3	-19053,-135
chr7:5630479-5631137	chr7	+	5630478	5631184	True	NM_001101,NM_003088	chr7,chr7	-,+	ACTB,FSCN1	-60246,1269
chr6:25651192-25652603	chr6	+	25651470	25652598	True	NM_170745,NM_006998	chr6,chr6	-,+	HIST1H2AA,SCGN	74242,150
chrX:114254511-114255486	chrX	+	114254689	114255482	True	NM_000640,NM_001145346	chrX,chrX	-,+	IL13RA2,RBMXL3	-2482,168480
chr7:86274273-86274675	chr7	+	86274278	86274710	True	NM_152748,NM_000840	chr7,chr7	-,+	KIAA1324L,GRM3	320631,-1099
chr14:95268898-95270061	chr14	+	95269061	95270068	True	NR_015340,NM_173849	chr14,chr14	+,-	SERPINA13,GSC	-162056,-32562
chr11:1647140-1647695	chr11	+	1647267	1647735	True	NM_001012709,NM_001001480	chr11,chr11	-,+	KRTAP5-4,KRTAP5-5	-3899,3297
chr19:378706-379001	chr19	+	378733	378995	True	NM_016585,NM_130760,NM_199202	chr19,chr19,chr19	-,+,-	THEG,MADCAM1,THEG	-2724,117494,-2724
chr19:3981878-3982747	chr19	+	3982041	3982671	True	NR_002602,NM_015897,NM_001961	chr19,chr19,chr19	-,+,-	SNORD37,PIAS4,EEF2	49,25077,2840
chr3:157281727-157283274	chr3	+	157282946	157283260	True	NM_001130002,NM_001167916	chr3,chr3	+,-	C3orf55,VEPH1	-21851,-61531
chr6:109101323-109102365	chr6	+	109101351	109102180	True	NR_033376,NM_001199934	chr6,chr6	+,-	NCRNA00222,SESN1	-28545,228061
chr6:15091271-15092243	chr6	+	15091270	15091798	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	154728,571541
chr8:143750303-143750787	chr8	+	143750359	143750821	True	NR_033343,NM_003724,NM_001077527	chr8,chr8,chr8	+,-,-	PSCA,JRK,JRK	904,630,630
chr9:68300168-68300447	chr9	+	68300325	68300477	True	NR_033907,NM_001012419	chr9,chr9	-,+	LOC642236,ANKRD20A3	153948,-373615
chr9:125593140-125593958	chr9	+	125593231	125593884	True	NM_080859,NM_005388	chr9,chr9	+,-	OR1K1,PDCL	-30887,-2296
chr2:60979920-60980709	chr2	+	60980289	60980493	True	NM_022894,NR_033980	chr2,chr2	+,-	PAPOLG,FLJ16341	2871,128006
chr9:131183419-131183780	chr9	+	131183418	131183796	True	NR_029837,NM_016174	chr9,chr9	-,+	MIR219-2,CERCAM	-28425,-710
chr2:224891364-224893289	chr2	+	224891475	224893271	True	NM_022915,NM_001136530	chr2,chr2	+,-	MRPL44,SERPINE2	-69405,10136
chr7:127669001-127669237	chr7	+	127669010	127669280	True	NM_022143,NR_027330	chr7,chr7	-,+	LRRC4,C7orf54	1772,-31499
chr15:77505753-77506772	chr15	+	77506225	77506638	True	NM_018200,NR_026813	chr15,chr15	+,-	HMG20A,C15orf5	206604,11165
chr21:45704935-45705371	chr21	+	45704965	45705269	True	NM_175867,NM_000658,NM_000383	chr21,chr21,chr21	-,+,+	DNMT3L,AIRE,AIRE	-22866,5004,493
chr14:100073460-100073872	chr14	+	100073660	100073922	True	NM_032425,NM_001144995	chr14,chr14	+,-	HHIPL1,CCDC85C	37557,-2933
chr4:147734542-147735058	chr4	+	147734541	147734806	True	NM_004575,NM_031956	chr4,chr4	+,-	POU4F2,TTC29	-174551,132283
chr18:9113883-9115778	chr18	+	9113957	9114853	True	NM_001042388,NM_021074	chr18,chr18	-,+	PPP4R1,NDUFV2	499797,-11380
chr14:75183486-75183751	chr14	+	75183485	75183757	True	NM_015962,NM_001039479	chr14,chr14	+,-	FCF1,KIAA0317	-3689,-3678
chr17:73898893-73900102	chr17	+	73899077	73899720	True	NM_173547,NM_001113324,NM_032478	chr17,chr17,chr17	-,+,-	TRIM65,C17orf106,MRPL38	-6023,75577,1516
chr11:47472306-47474254	chr11	+	47472824	47474248	True	NM_152264,NM_032645,NM_005055	chr11,chr11,chr11	+,-,-	SLC39A13,RAPSN,RAPSN	-42829,-2094,-2094
chr14:21209564-21211563	chr14	+	21209594	21211333	True	NM_198232,NM_006683	chr14,chr14	-,+	RNASE1,EDDM3A	59275,2765
chr2:172019393-172020394	chr2	+	172019848	172020204	True	NM_012290,NM_015530	chr2,chr2	-,+	TLK1,GORASP2	-2438,-234872
chr2:48845079-48845734	chr2	+	48845303	48845717	True	NM_001193487,NM_000233,NM_006872	chr2,chr2,chr2	+,-,+	GTF2A1L,LHCGR,GTF2A1L	-418,137213,-418
chr22:21993464-21993872	chr22	+	21993569	21993825	True	NM_152612,NM_001017964,NM_022044	chr22,chr22,chr22	+,-,+	CCDC116,YDJC,SDF2L1	-6534,-9229,2716
chr1:173444434-173445512	chr1	+	173444602	173445484	True	NR_037845,NM_004905	chr1,chr1	-,+	LOC100506023,PRDX6	870,1001
chr16:58499218-58500946	chr16	+	58499324	58500971	True	NM_001130487,NR_002978,NM_020465,NM_022910	chr16,chr16,chr16,chr16	+,-,+,+	NDRG4,SNORA46,NDRG4,NDRG4	-1381,81616,-1826,-610
chr1:158813909-158815186	chr1	+	158814067	158815005	True	NM_002432,NM_001005278	chr1,chr1	+,-	MNDA,OR6N2	-12957,-66642
chr17:44439029-44439467	chr17_ctg5_hap1	-	391298	391694	False	NM_001039083,NM_001113738,NM_001103154,NM_016632,NM_006178	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	+,+,+,+,-	ARL17B,ARL17A,ARL17B,ARL17A,NSF	37,8,37,8,-10683
chr17:44439029-44439467	chr17_ctg5_hap1	+	1513772	1514168	False	NM_016632,NR_033799	chr17_ctg5_hap1,chr17_ctg5_hap1	-,+	ARL17A,NSFP1	-8,10744
chr17:44439029-44439467	chr17	+	44439051	44439447	True	NM_001039083,NM_001113738,NM_001103154,NM_016632,NR_033799	chr17,chr17,chr17,chr17,chr17	-,-,-,-,+	ARL17B,ARL17A,ARL17B,ARL17A,NSFP1	-37,-8,-37,-8,10731
chr17:44439029-44439467	chr17	+	44656976	44657372	False	NM_001113738,NM_016632,NM_006178	chr17,chr17,chr17	-,-,+	ARL17A,ARL17A,NSF	-8,-8,10665
chr16:21276263-21276817	chr16	+	21276283	21276858	True	NM_001014444,NM_145865	chr16,chr16	-,+	CRYM,ANKS4B	37597,-31318
chr8:37401089-37401474	chr8	+	37401100	37401419	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	151881,204196
chr1:100435779-100436056	chr1	+	100435899	100436035	True	NM_012243,NM_194292	chr1,chr1	+,-	SLC35A3,SASS6	-410,162526
chr4:3549555-3550521	chr4	+	3549559	3550285	True	NM_002337,NM_173660	chr4,chr4	-,+	LRPAP1,DOK7	-15335,-84577
chr9:138392453-138392694	chr9	+	138392452	138392624	True	NM_016034,NM_001048265,NM_144654	chr9,chr9,chr9	+,-,-	MRPS2,C9orf116,C9orf116	-20,-691,-691
chr16:90131655-90133463	chr16	+	90132345	90133327	True	NM_052996,NR_023348	chr16,chr16	-,+	PRDM7,GAS8	-3612,-43388
chr11:114166444-114167063	chr11	+	114166470	114167102	True	NM_019021,NM_006169	chr11,chr11	-,+	C11orf71,NNMT	104087,10
chr7:27206868-27208016	chr7	+	27207129	27207978	True	NM_152739,NR_029911,NR_002795,NM_018951	chr7,chr7,chr7,chr7	-,-,+,-	HOXA9,MIR196B,HOXA11-AS1,HOXA10	-1980,1255,17048,6028
chr19:20607578-20608492	chr19	+	20607690	20607938	True	NR_036455,NM_052852	chr19,chr19	-,+	ZNF826P,ZNF486	-19,-329658
chr18:7116460-7116954	chr18	+	7116490	7117003	True	NM_005559,NM_001105581	chr18,chr18	-,+	LAMA1,LRRC30	860,114133
chr18:3008984-3010060	chr18	+	3009077	3010004	True	NM_014646,NM_032048	chr18,chr18	-,+	LPIN2,EMILIN2	1991,-162100
chr22:41764048-41764561	chr22	+	41764059	41764278	True	NM_001145398,NM_016272	chr22,chr22	+,-	TEF,TOB2	-718,78800
chr5:170814248-170814452	chr5	+	170814248	170814500	True	NM_002520,NM_199185,NR_037474,NM_001037738	chr5,chr5,chr5,chr5	+,+,-,+	NPM1,NPM1,MIR3912,NPM1	207,207,-484,207
chr14:55868723-55870351	chr14	+	55868728	55870123	True	NM_014924,NM_152231	chr14,chr14	-,+	ATG14,FBXO34	8503,-129907
chrX:103809349-103809764	chrX	+	103809351	103809790	True	NM_153448,NM_017416	chrX,chrX	-,+	ESX1,IL1RAPL2	-309752,1205
chr19:34176089-34176772	chr19	+	34176110	34176723	True	NM_001166057,NM_022467	chr19,chr19	-,+	PEPD,CHST8	-163311,-727
chr22:23329531-23329920	chr22	+	23329768	23329840	True	NM_002073,NM_014433	chr22,chr22	+,-	GNAZ,RTDR1	82828,154459
chr15:41575759-41576040	chr15	+	41575858	41576056	True	NM_007280,NR_026757	chr15,chr15	-,+	OIP5,LOC729082	48813,144
chr8:26723301-26723507	chr8	+	26723368	26723505	True	NM_033302,NM_033303,NM_000680,NM_033304,NM_001386	chr8,chr8,chr8,chr8,chr8	-,-,-,-,+	ADRA1A,ADRA1A,ADRA1A,ADRA1A,DPYSL2	-446,-446,-446,-446,-287998
chrX:30249509-30249850	chrX	+	30249662	30249899	True	NM_000475,NM_002365	chrX,chrX	-,+	NR0B1,MAGEB3	77646,-1160
chrX:30249509-30249850	chrX	+	30251407	30251636	False	NM_000475,NM_002365,NM_002367	chrX,chrX,chrX	-,+,+	NR0B1,MAGEB3,MAGEB4	75909,-2905,8420
chr1:68296177-68296514	chr1	+	68296177	68296553	True	NM_001924,NM_018841	chr1,chr1	+,-	GADD45A,GNG12	-145372,2652
chr9:113341265-113341616	chr9	+	113341296	113341558	True	NM_001166280,NM_153366	chr9,chr9	+,-	MUSK,SVEP1	89492,652
chr14:105288226-105288452	chr14	+	105288412	105288500	True	NR_024396,NM_001014432	chr14,chr14	+,-	MGC23270,AKT1	-925,-26332
chr4:180087920-180089728	chr4	+	180088141	180089605	True	NR_033655,NR_028342	chr4,chr4	-,+	AGA,LOC285501	-1724484,-1438281
chr7:129073944-129074154	chr7	+	129073976	129074110	True	NM_020704,NM_001134336,NR_029614	chr7,chr7,chr7	+,+,-	FAM40B,FAM40B,MIR182	163,163,336272
chr6:66256757-66258506	chr6	+	66256790	66258461	True	NR_026540,NM_198283	chr6,chr6	+,-	MCART3P,EYS	239310,31295
chr9:131681978-131682548	chr9	+	131682091	131682317	True	NM_174933,NM_001100877,NM_001100876,NM_014908	chr9,chr9,chr9,chr9	+,+,+,-	PHYHD1,PHYHD1,PHYHD1,DOLK	856,2244,856,27753
chr15:75625754-75626151	chr15	+	75625921	75626103	True	NR_030360,NM_017828	chr15,chr15	-,+	MIR631,COMMD4	19973,2270
chr2:135784669-135785845	chr2	+	135785062	135785758	True	NM_001018046,NM_025052,NM_001172435	chr2,chr2,chr2	-,-,+	YSK4,YSK4,RAB3GAP1	-2814,-2814,24076
chr4:37828932-37830114	chr4	+	37829079	37830064	True	NM_001085400,NM_018290	chr4,chr4	-,+	RELL1,PGM2	-141080,-848
chr22:38716094-38717419	chr22	+	38716429	38717097	True	NM_152221,NM_001161573,NM_001894	chr22,chr22,chr22	-,+,-	CSNK1E,MAFF,CSNK1E	-3016,-117453,-2340
chr16:18813383-18813702	chr16	+	18813387	18813571	True	NM_015161,NM_024847	chr16,chr16	-,+	ARL6IP1,TMC7	-530,181684
chr19:51296319-51296836	chr19	+	51296338	51296841	True	NR_003069,NR_003068,NM_033068,NR_003067	chr19,chr19,chr19,chr19	-,-,+,-	SNORD88C,SNORD88B,ACPT,SNORD88A	8887,5591,-2717,6001
chr3:145968997-145969411	chr3	+	145969087	145969228	True	NM_001177304,NM_001128306,NR_033439,NR_033438,NM_003412,NM_020353	chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,+,-	PLSCR4,PLSCR4,PLSCR4,PLSCR4,ZIC1,PLSCR4	-121,-121,-436,-121,1157952,-121
chr19:58872453-58873194	chr19	+	58872529	58873203	True	NM_130786,NM_198458,NR_015380	chr19,chr19,chr19	-,-,+	A1BG,ZNF497,A1BG-AS1	-7664,975,-9247
chr11:62522479-62522752	chr11	+	62522703	62522795	True	NM_002696,NM_024784	chr11,chr11	+,-	POLR2G,ZBTB3	6215,-1047
chr11:117946122-117947995	chr11	+	117946272	117947784	True	NM_001173551,NM_001173552,NM_001142349,NM_001083947,NM_019894	chr11,chr11,chr11,chr11,chr11	+,+,-,+,+	TMPRSS4,TMPRSS4,SCN4B,TMPRSS4,TMPRSS4	-58,-58,68450,-58,-58
chr22:39102586-39103873	chr22	+	39102705	39103922	True	NM_014876,NM_004286	chr22,chr22	-,+	JOSD1,GTPBP1	-6246,-949
chr7:122339529-122341480	chr7	+	122339759	122341041	True	NM_198085,NM_139175,NR_036484	chr7,chr7,chr7	-,-,+	RNF148,RNF133,LOC154860	2036,-551,-396107
chr14:103564276-103564552	chr14	+	103564327	103564543	True	NM_001077594,NM_006035	chr14,chr14	+,-	EXOC3L4,CDC42BPB	1937,-40585
chr8:133846872-133847951	chr8	+	133846893	133847864	True	NM_003235,NM_144649	chr8,chr8	+,-	TG,TMEM71	31340,-73979
chr4:8160642-8160857	chr4	+	8160748	8160904	True	NM_001130083,NM_001130087,NM_001130086,NM_001130085,NM_001130084,NM_001130088,NM_032432,NM_018986	chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4	-,-,-,-,-,-,-,+	ABLIM2,ABLIM2,ABLIM2,ABLIM2,ABLIM2,ABLIM2,ABLIM2,SH3TC1	-189,-189,-189,-189,-189,-189,-189,40155
chr22:21022589-21022897	chr22	+	21022711	21022787	True	NM_002650,NR_024592	chr22,chr22	-,+	PI4KA,POM121L4P	66218,21055
chr16:25017693-25018980	chr16	+	25017919	25019025	True	NM_018054,NM_001006634,NM_001032391	chr16,chr16,chr16	-,-,+	ARHGAP17,ARHGAP17,LCMT1	7700,7700,104021
chr2:130899541-130899867	chr2	+	130899676	130899914	True	NM_207310,NR_033903	chr2,chr2	-,+	CCDC74B,LOC285103	2767,-12531
chr2:130899541-130899867	chr2	-	132288191	132288429	False	NM_001085365,NM_138770	chr2,chr2	-,+	MZT2A,CCDC74A	-38127,-2750
chr11:77301160-77302634	chr11	+	77301265	77302614	True	NM_173039,NM_001293	chr11,chr11	+,-	AQP11,CLNS1A	-636,46292
chr5:140062780-140063271	chr5	+	140062786	140063139	True	NM_012208,NM_002109,NM_194249	chr5,chr5,chr5	+,-,-	HARS2,HARS,DND1	7878,7882,-9615
chr3:193965479-193965805	chr3	+	193965550	193965769	True	NR_024480,NM_005524	chr3,chr3	-,+	LOC100131551,HES1	64875,-111678
chr5:138534060-138534530	chr5	+	138534257	138534470	True	NM_001194954,NM_001037633,NM_022464	chr5,chr5,chr5	+,-,-	MATR3,SIL1,SIL1	74970,-192,-192
chr4:57543817-57545734	chr4	+	57543906	57545033	True	NM_032495,NM_001145460,NM_139212,NM_206919	chr4,chr4,chr4,chr4	-,-,-,+	HOPX,HOPX,HOPX,ARL9	2889,2889,2889,-172582
chr9:39289827-39291255	chr9	+	39290371	39290449	True	NM_033655,NM_001085452	chr9,chr9	-,+	CNTNAP3,FAM75A1	-2071,65249
chr9:39289827-39291255	chr9	-	65574623	65574701	False	NR_024496,NM_015667	chr9,chr9	+,-	LOC442421,FAM75A7	919567,-65013
chr9:39289827-39291255	chr9	+	39819616	39819694	False	NR_003528,NM_001085452	chr9,chr9	-,+	LOC653501,FAM75A1	-355090,65280
chr9:39289827-39291255	chr9	+	41435646	41435724	False	NM_015667	chr9	+	FAM75A7	64954
chr2:20425760-20426623	chr2	+	20425792	20426438	True	NM_004040,NM_002997,NM_001006946	chr2,chr2,chr2	+,-,-	RHOB,SDC1,SDC1	220396,-865,-598
chr9:34729280-34729811	chr9	+	34729286	34729764	True	NM_004512,NM_001141917	chr9,chr9	+,-	IL11RA,C9orf144B	-75405,-43
chr9:34729280-34729811	chr9	+	34838644	34838695	False	NR_024481,NM_015297	chr9,chr9	-,+	C9orf144,KIAA1045	-61,119496
chr19:40480920-40482231	chr19	+	40481037	40481762	True	NM_153001,NM_003890,NM_006503	chr19,chr19,chr19	+,-,+	PSMC4,FCGBP,PSMC4	-4025,-40504,-4025
chr5:99723719-99724086	chr5	+	99723966	99724112	True	NM_198507,NR_027503	chr5,chr5	+,-	FAM174A,LOC100133050	147011,-8
chr5:99723719-99724086	chr5	-	98861631	98861681	False	NM_001270,NR_036530	chr5,chr5	-,+	CHD1,LOC100289230	-599393,-596844
chr11:47396748-47398366	chr11	+	47396914	47397848	True	NM_003120,NM_001128225,NM_001080547	chr11,chr11,chr11	-,+,-	SPI1,SLC39A13,SPI1	2329,32197,2329
chr16:30365426-30365703	chr16	+	30365460	30365612	True	NM_006110,NM_013292,NR_024465	chr16,chr16,chr16	-,+,-	CD2BP2,MYLPF,CD2BP2	1120,20510,693
chr11:128392508-128392775	chr11	+	128392537	128392805	True	NM_001162422,NM_001167681,NM_005238	chr11,chr11,chr11	-,+,-	ETS1,FLI1,ETS1	-332,171005,-332
chr2:906954-907336	chr2	+	906975	907209	True	NM_018968,NR_033880	chr2,chr2	+,-	SNTG2,LOC339822	39344,-42863
chr1:237145056-237145701	chr1	+	237145284	237145644	True	NM_001035,NM_018072	chr1,chr1	+,-	RYR2,HEATR1	60057,-377443
chr7:127883071-127884226	chr7	+	127883221	127883952	True	NM_000230,NM_001166135	chr7,chr7	+,-	LEP,RBM28	-1941,100061
chr5:36151849-36152347	chr5	+	36151878	36152390	True	NR_030306,NM_001007527,NM_005983,NM_032637	chr5,chr5,chr5,chr5	-,-,+,+	MIR580,LMBRD2,SKP2,SKP2	-3788,69,40,40
chr15:40699940-40700764	chr15	+	40699989	40700597	True	NM_207380,NM_002225,NM_001159508	chr15,chr15,chr15	-,+,+	C15orf52,IVD,IVD	-66821,-2354,-2354
chr6:86389878-86390769	chr6	+	86390024	86390635	True	NM_002526,NR_003044,NR_002743,NR_003038	chr6,chr6,chr6,chr6	+,-,-,-	NT5E,SNORD50B,SNORD50A,SNHG5	-230773,-2647,-2938,-1573
chr5:146378499-146379960	chr5	+	146378700	146379860	True	NM_145001,NM_181674	chr5,chr5	+,-	STK32A,PPP2R2B	234718,55890
chr10:133109027-133109260	chr10	+	133109031	133109231	True	NM_018461,NM_174937	chr10,chr10	+,-	PPP2R2D,TCERG1L	638728,803
chr13:36921323-36923226	chr13	+	36921700	36922959	True	NM_015087,NM_001111046,NM_001142296,NM_001142295	chr13,chr13,chr13,chr13	-,+,-,-	SPG20,CCNA1,SPG20,SPG20	-1054,83007,-1054,-766
chr16:85616069-85617453	chr16	+	85616417	85617424	True	NM_001134473,NM_016095	chr16,chr16	+,-	KIAA0182,GINS2	27604,105214
chr14:102787620-102787948	chr14	+	102787718	102787898	True	NM_014226,NM_018335	chr14,chr14	-,+	RAGE,ZNF839	-16187,-1674
chrX:115238039-115239586	chrX	+	115238296	115239603	True	NM_000686,NM_001017978	chrX,chrX	+,-	AGTR2,CXorf61	62354,354584
chr6:35772792-35773059	chr6	+	35772883	35772993	True	NM_001832,NM_182548	chr6,chr6	-,+	CLPS,LHFPL5	-7781,77
chr16:70472058-70472449	chr16	+	70472062	70472366	True	NM_145059,NM_006927	chr16,chr16	+,-	FUK,ST3GAL2	16131,675
chr6:28475586-28476302	chr6	+	28475822	28476145	True	NM_182701,NM_001509	chr6,chr6	-,+	GPX6,GPX5	7475,17643
chr20:34117047-34118030	chr20	+	34117052	34117628	True	NM_015966,NR_026933,NM_001145350	chr20,chr20,chr20	+,-,-	ERGIC3,C20orf173,C20orf173	12149,-15,-15
chr8:32504617-32504917	chr8	+	32504691	32504955	True	NM_013959,NM_032664	chr8,chr8	+,-	NRG1,FUT10	-491,825759
chrX:9750606-9751287	chrX	+	9751118	9751336	True	NM_000273,NM_001649	chrX,chrX	-,+	GPR143,SHROOM2	-17113,3159
chr13:113621327-113622025	chr13	+	113621564	113622066	True	NR_034002,NM_001112732	chr13,chr13	-,+	MCF2L-AS1,MCF2L	936,690
chr14:19412375-19412639	chr22	-	16414859	16415007	False	NM_001005239,NR_001591	chr22,chr22	-,+	OR11H1,psiTPTE22	34855,667793
chr14:19412375-19412639	chr14	+	19412384	19412532	True	NM_001145442,NM_001013354	chr14,chr14	-,+	POTEM,OR11H12	607790,-34849
chr12:56353830-56354485	chr12	+	56354065	56354161	True	NM_001200053,NM_006928,NM_001798,NM_001200054,NM_052827	chr12,chr12,chr12,chr12,chr12	-,-,+,-,+	PMEL,PMEL,CDK2,PMEL,CDK2	5735,6385,6394,5735,6394
chrX:55101675-55101939	chrX	+	55101681	55101913	True	NM_001015038,NM_001037968	chrX,chrX	+,-	PAGE2B,ALAS2	-228,-44184
chr2:64370669-64370916	chr2	+	64370693	64370857	True	NM_006759,NM_020651	chr2,chr2	+,-	UGP2,PELI1	-301743,798
chr20:60876508-60876789	chr20	+	60876544	60876688	True	NM_007002,NM_175573,NM_005560	chr20,chr20,chr20	+,+,-	ADRM1,ADRM1,LAMA5	1338,1338,65730
chr19:751198-751476	chr19	+	751218	751436	True	NM_214710,NM_173481	chr19,chr19	-,+	PRSS57,C19orf21	-55757,-123
chr9:94188003-94189189	chr9	+	94188183	94189219	True	NR_037472,NM_005384	chr9,chr9	+,-	MIR3910-1,NFIL3	209313,-2039
chr21:32998668-32999413	chr21	+	32998900	32999451	True	NM_000454,NM_003253	chr21,chr21	+,-	SOD1,TIAM1	32483,-67610
chr20:23809504-23810077	chr20	+	23809506	23809924	True	NM_001322,NR_001279	chr20,chr20	-,+	CST2,CSTT	-2194,-309776
chr12:120632718-120633454	chr12	+	120632727	120633163	True	NM_053275,NM_012240,NM_001002,NM_006836	chr12,chr12,chr12,chr12	-,+,-,-	RPLP0,SIRT4,RPLP0,GCN1L1	5901,106960,5901,-214
chrX:153955720-153957630	chrX	+	153956091	153957666	True	NM_001081573,NM_001142463	chrX,chrX	-,+	GAB3,DKC1	21732,33364
chr2:101868381-101868790	chr2	+	101868397	101868744	True	NR_003070,NM_017546	chr2,chr2	-,+	SNORD89,C2orf29	20826,600
chr4:174256532-174257892	chr4	+	174256562	174257697	True	NM_003864,NM_001130689,NM_001130688,NM_002129	chr4,chr4,chr4,chr4	+,-,-,-	SAP30,HMGB2,HMGB2,HMGB2	34395,-1642,-1053,-967
chrX:68726782-68727383	chrX	+	68726837	68727432	True	NM_145119,NM_015686	chrX,chrX	-,+	PJA1,FAM155B	-341472,-1810
chr12:109027430-109027638	chr12	+	109027491	109027609	True	NM_003006,NM_213595	chr12,chr12	-,+	SELPLG,ISCU	111,-71248
chrX:108716679-108718643	chrX	+	108716802	108718567	True	NM_018698,NM_001522	chrX,chrX	+,-	NXT2,GUCY2F	60442,6768
chr14:103760504-103760768	chr14	+	103760515	103760587	True	NR_033938,NM_001969	chr14,chr14	-,+	LOC100131366,EIF5	-105150,39905
chr8:56690257-56690786	chr8	+	56690363	56690600	True	NM_152417,NM_024831	chr8,chr8	-,+	TMEM68,TGS1	-4478,-4634
chr13:76209583-76209787	chr13	+	76209646	76209792	True	NM_005358,NM_203497	chr13,chr13	+,-	LMO7,COMMD6	-15127,-97655
chr2:119701602-119702005	chr2	+	119701650	119701989	True	NM_001426,NM_006770	chr2,chr2	-,+	EN1,MARCO	-95891,-1956
chrX:51812309-51812685	chrX	+	51812390	51812651	True	NM_001098800,NM_177537,NM_177535,NR_003712,NM_030801,NR_003711	chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,+,-,-	MAGED4,MAGED4B,MAGED4B,SNORA11E,MAGED4B,SNORA11D	-111,-22,-22,-5998,-22,-5821
chrX:51812309-51812685	chrX	-	51927635	51927896	False	NM_001098800,NM_177537,NM_177535,NR_003712,NM_030801,NR_003711	chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,-,+,+	MAGED4,MAGED4B,MAGED4B,SNORA11E,MAGED4B,SNORA11D	111,22,22,5998,22,5821
chr20:30793835-30795094	chr20	+	30793841	30794986	True	NM_015352,NM_172236,NM_002657	chr20,chr20,chr20	+,+,-	POFUT1,POFUT1,PLAGL2	709,709,612
chr6:100055307-100055729	chr6	+	100055452	100055766	True	NM_005190,NM_021620	chr6,chr6	-,+	CCNC,PRDM13	-38762,-856
chr4:186697976-186699493	chr4	+	186698501	186699523	True	NM_001145673,NM_003265	chr4,chr4	-,+	SORBS2,TLR3	-1435,290785
chr15:44069307-44070088	chr15	+	44069320	44070086	True	NM_001199877,NM_025165	chr15,chr15	+,-	SERF2,ELL3	-77,54
chr9:139983902-139984254	chr9	+	139983940	139984114	True	NM_016219,NR_027447	chr9,chr9	+,-	MAN1B1,LOC100289341	-2574,-2671
chr8:92151808-92152972	chr8	+	92151890	92152724	True	NM_001129890,NM_018710	chr8,chr8	+,-	LRRC69,TMEM55A	-37096,-98687
chr11:67121024-67121243	chr11	+	67121054	67121292	True	NM_021173,NR_024469	chr11,chr11	-,+	POLD4,LOC100130987	-2,-35795
chr1:161285643-161286899	chr1	+	161285729	161286757	True	NM_003001,NM_001035511,NM_000530,NM_001035513,NM_001035512	chr1,chr1,chr1,chr1,chr1	+,+,-,+,+	SDHC,SDHC,MPZ,SDHC,SDHC	-1621,-1621,-5967,-1621,-1621
chr7:48964049-48964300	chr7	+	48964049	48964291	True	NR_003595,NM_152782	chr7,chr7	+,-	CDC14C,SUN3	37,-895333
chr5:74786007-74787363	chr5	+	74786271	74787392	True	NM_005713,NM_016218	chr5,chr5	-,+	COL4A3BP,POLK	20112,20264
chr16:67967143-67967633	chr16	+	67967488	67967556	True	NM_006742,NM_001907,NM_002801	chr16,chr16,chr16	+,-,-	PSKH1,CTRL,PSMB10	-40373,-1710,3280
chr15:83737372-83738029	chr15	+	83737564	83737951	True	NM_001011885,NM_001144903,NM_025238	chr15,chr15,chr15	-,+,-	BTBD1,TM6SF1,BTBD1	-1458,38372,-1458
chr5:180649045-180649356	chr5	+	180649088	180649398	True	NM_033549,NM_033342,NM_201627	chr5,chr5,chr5	+,-,+	TRIM41,TRIM7,TRIM41	907,-16911,907
chr3:100052945-100053420	chr3	+	100053051	100053465	True	NM_020202,NM_014820	chr3,chr3	+,-	NIT2,TOMM70A	96,66810
chr7:55753062-55754263	chr7	+	55753172	55754027	True	NM_182633,NR_027342,NR_027339,NR_027340	chr7,chr7,chr7,chr7	+,-,-,-	ZNF713,FKBP9L,FKBP9L,FKBP9L	226303,3031,3190,1762
chr7:55753062-55754263	chr7	-	33041340	33042135	False	NM_001166118,NM_007270	chr7,chr7	-,+	NT5C3,FKBP9	38436,-44402
chr3:16211728-16212109	chr3	+	16211747	16212147	True	NM_001047434,NM_054110	chr3,chr3	-,+	DPH3,GALNTL2	94399,4036
chr3:153849824-153850803	chr3	+	153849869	153850765	True	NR_037901,NM_015595	chr3,chr3	-,+	LOC100507524,ARHGEF26	-10870,-10772
chr14:70040292-70040594	chr14	+	70040364	70040524	True	NR_024630,NM_014734	chr14,chr14	-,+	C14orf162,KIAA0247	-2446,37785
chr5:110016020-110017024	chr5	+	110016122	110017033	True	NM_001039763,NM_138773	chr5,chr5	-,+	TMEM232,SLC25A46	45467,57720
chrX:23756143-23757835	chrX	+	23756276	23757564	True	NM_001037171,NM_002970,NM_001033583	chrX,chrX,chrX	-,+,-	ACOT9,SAT1,ACOT9	3893,43710,3893
chr13:60738260-60739346	chr13	+	60738356	60739317	True	NM_001042517,NM_001146071	chr13,chr13	-,+	DIAPH3,TDRD3	-237,231273
chr11:71897787-71898048	chr11	+	71897789	71897933	True	NM_016725,NM_016724,NM_005169,NM_016729,NM_000802	chr11,chr11,chr11,chr11,chr11	+,+,-,+,+	FOLR1,FOLR1,PHOX2A,FOLR1,FOLR1	2668,2668,57337,5239,3025
chr14:105531179-105531503	chr14	+	105531195	105531491	True	NM_174891,NM_013345	chr14,chr14	+,-	C14orf79,GPR132	-78630,313
chr1:144993495-144994608	chr1	+	144993497	144994631	True	NM_014644,NM_001195260,NM_001195261,NM_004892,NM_001002812,NM_001002810,NM_001198834	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,-,-	PDE4DIP,PDE4DIP,PDE4DIP,SEC22B,PDE4DIP,PDE4DIP,PDE4DIP	441,2530,501,101775,441,452,452
chr6:15033476-15034145	chr6	+	15033535	15034143	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	212383,629196
chr6:27855793-27857042	chr6	+	27855923	27856961	True	NM_003514,NM_003527,NM_003535	chr6,chr6,chr6	-,+,-	HIST1H2AM,HIST1H2BO,HIST1H3J	4060,4241,1667
chr19:21324482-21324821	chr19	+	21324535	21324791	True	NM_133473,NM_021269	chr19,chr19	+,-	ZNF431,ZNF708	48,187471
chr21:47743127-47743467	chr21	+	47743149	47743450	True	NM_006031,NM_058180	chr21,chr21	+,-	PCNT,C21orf58	585,385
chr5:93447416-93447698	chr5	+	93447475	93447728	True	NM_032042,NM_001163417,NM_001163418,NR_028080,NM_032290	chr5,chr5,chr5,chr5,chr5	-,-,-,-,+	FAM172A,FAM172A,FAM172A,FAM172A,ANKRD32	-71,-71,-71,-71,506662
chr14:74549261-74550867	chr14	+	74549385	74550855	True	NM_005589,NM_001024674	chr14,chr14	-,+	ALDH6A1,LIN52	391,800
chr17:72710150-72711115	chr17	+	72710605	72710749	True	NM_001163989,NM_139018	chr17,chr17	+,-	RAB37,CD300LF	22209,-1497
chr11:57366705-57368593	chr11	+	57367059	57368491	True	NM_001032295,NM_000062,NM_198183	chr11,chr11,chr11	+,+,-	SERPING1,SERPING1,UBE2L6	-1406,-2084,-31606
chr6:89790170-89790741	chr6	+	89790219	89790631	True	NM_006813,NM_080743	chr6,chr6	+,-	PNRC1,SRSF12	11,37219
chr11:4127900-4128214	chr11	+	4128008	4128099	True	NM_001005161,NM_001033	chr11,chr11	-,+	OR52B4,RRM1	261580,-12146
chr4:78078021-78078437	chr4	+	78078021	78078271	True	NM_004354,NM_006835	chr4,chr4	+,-	CCNG2,CCNI	85,-80896
chr19:38040093-38040304	chr19	+	38040150	38040312	True	NM_016536,NM_152606	chr19,chr19	-,+	ZNF571,ZNF540	45411,1995
chr12:133339637-133340021	chr12	+	133339729	133339981	True	NM_001170544,NM_015114	chr12,chr12	+,-	PGAM5,ANKLE2	-52394,-1278
chr10:126850573-126850912	chr10	+	126850633	126850775	True	NM_001083914,NM_001329,NM_017580	chr10,chr10,chr10	-,-,+	CTBP2,CTBP2,ZRANB1	-1009,-1530,-219992
chr9:116176776-116177582	chr9	+	116176866	116177124	True	NM_017443,NR_027261,NM_152786	chr9,chr9,chr9	-,-,+	POLE3,POLE3,C9orf43	-3837,-3911,-3896
chr7:55987730-55989709	chr7	+	55987945	55989615	True	NM_182633,NM_207366	chr7,chr7	+,-	ZNF713,SEPT14	-7665,-57463
chr22:46373416-46373738	chr22	+	46373508	46373706	True	NM_058238,NR_027240	chr22,chr22	-,+	WNT7B,LOC730668	-500,28789
chr19:30206813-30207979	chr19	+	30207089	30207771	True	NM_001031726,NM_024310,NM_031448	chr19,chr19,chr19	-,+,-	C19orf12,PLEKHF1,C19orf12	-1126,-50813,-637
chr11:20408271-20408970	chr11	+	20408469	20409019	True	NM_001029865,NM_005788,NM_001145166,NM_001145167	chr11,chr11,chr11,chr11	-,+,+,+	DBX1,PRMT3,PRMT3,PRMT3	-226599,56,56,56
chr19:45927173-45927519	chr19	+	45927200	45927466	True	NM_001166049,NM_202001,NM_012099,NM_001983	chr19,chr19,chr19,chr19	-,-,+,-	ERCC1,ERCC1,CD3EAP,ERCC1	-23,-380,-17784,-23
chr19:45061109-45062670	chr19	+	45061245	45062394	True	NM_001205280,NR_027754	chr19,chr19	+,-	LOC147710,CEACAM22P	54545,-1095
chr1:241866472-241866894	chr1	+	241866477	241866943	True	NM_014322,NM_144625	chr1,chr1	-,+	OPN3,WDR64	-62776,-50948
chr20:5092783-5092991	chr20	+	5092783	5093042	True	NM_001009923,NM_182649,NM_001009925,NM_001009924,NR_028370,NM_014145	chr20,chr20,chr20,chr20,chr20,chr20	-,-,-,-,+,-	C20orf30,PCNA,C20orf30,C20orf30,PCNA-AS1,C20orf30	748,7662,748,748,7189,748
chr10:72577999-72579545	chr10	+	72578320	72579229	True	NM_003901,NM_152710	chr10,chr10	+,-	SGPL1,C10orf27	-2667,-33163
chr12:130647571-130647804	chr12	+	130647584	130647790	True	NR_033834,NM_007197	chr12,chr12	-,+	FLJ31485,FZD10	-1361,-631
chr4:70499885-70501467	chr4	+	70500054	70501168	True	NM_001105677,NM_001025104	chr4,chr4	-,+	UGT2A2,CSN1S1	4221,295630
chr7:71802531-71803225	chr7	+	71802585	71803212	True	NR_001588,NM_001017440	chr7,chr7	+,-	SBDSP1,CALN1	496739,-377
chr11:107876058-107876782	chr11	+	107876395	107876677	True	NM_017515,NM_003478	chr11,chr11	-,+	SLC35F2,CUL5	-146481,2730
chr8:91029551-91030205	chr8	+	91029550	91030063	True	NM_002485,NM_001359	chr8,chr8	-,+	NBN,DECR1	-32651,-16021
chr12:27151059-27152251	chr12	+	27151107	27152028	True	NM_004264,NM_016551	chr12,chr12	+,-	MED21,TM7SF3	23454,15374
chr3:169487701-169489687	chr3	+	169487737	169489657	True	NM_001185119,NM_001185118,NM_018657,NR_033702,NR_001566,NM_032487,NR_033703	chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,-,-,+	MYNN,MYNN,MYNN,MYNN,TERC,ARPM1,MYNN	2395,1195,1195,1195,-4889,-54,1195
chr22:39968731-39969946	chr22	+	39969147	39969971	True	NM_001003406,NM_194326,NM_021096	chr22,chr22,chr22	+,-,+	CACNA1I,RPS19BP1,CACNA1I	-2440,-40287,-2440
chr8:24299608-24300371	chr8	+	24299714	24300392	True	NM_003817,NM_006158	chr8,chr8	+,-	ADAM7,NEFL	-1263,513789
chr4:3317985-3318779	chr4	+	3318066	3318616	True	NM_002926,NM_198229,NM_002337	chr4,chr4,chr4	+,+,-	RGS12,RGS12,LRPAP1	-2243,-2243,215658
chr11:76494551-76495004	chr11	+	76494680	76494902	True	NM_015516,NR_024042	chr11,chr11	+,-	TSKU,GUCY2E	-446,-61847
chr3:183994123-183994340	chr3	+	183994256	183994320	True	NM_033259,NM_001100121,NM_001100120,NM_001037324	chr3,chr3,chr3,chr3	-,+,+,+	CAMK2N2,ECE2,ECE2,ECE2	-15005,-508,-508,-508
chr22:50972058-50972504	chr22	+	50972221	50972523	True	NM_005138,NM_001953,NM_001169111,NM_001169110,NM_001113756,NM_001169109,NM_001113755,NM_001014440,NM_138433	chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,-,-,-,-,+	SCO2,TYMP,SCO2,SCO2,TYMP,SCO2,TYMP,ODF3B,KLHDC7B	-8187,-3707,-8188,-7647,-3963,-7353,-3707,-1213,13938
chr6:26026672-26027276	chr6	+	26026712	26027202	True	NM_005325,NM_003537,NM_003544,NM_003529,NM_003538,NM_003513	chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,+,+,-	HIST1H1A,HIST1H3B,HIST1H4B,HIST1H3A,HIST1H4A,HIST1H2AB	-8672,5136,328,-6047,-4858,6644
chr15:24922626-24922853	chr15	+	24922630	24922874	True	NM_018958,NR_026647	chr15,chr15	+,-	C15orf2,PWRN2	-2140,-507577
chr7:39676360-39677936	chr7	+	39676591	39677953	True	NM_138701,NM_005402	chr7,chr7	-,+	C7orf11,RALA	496354,-13499
chr8:145654852-145655271	chr8	+	145654936	145655068	True	NM_145754,NM_183057,NM_016208	chr8,chr8,chr8	+,-,-	KIFC2,VPS28,VPS28	36669,-1009,-1009
chr4:48360495-48360828	chr4	+	48360616	48360683	True	NM_020846,NM_003215	chr4,chr4	+,-	SLAIN2,TEC	-17054,-88802
chr17:65239520-65240810	chr17	+	65239666	65240634	True	NM_014877,NM_012417	chr17,chr17	-,+	HELZ,PITPNC1	735,133289
chr19:49816665-49816907	chr19	+	49816698	49816766	True	NM_001040031,NR_036209	chr19,chr19	+,-	CD37,MIR4324	21910,-4573
chr10:98501628-98503047	chr10	+	98502133	98502955	True	NM_152309,NM_001170765	chr10,chr10	-,+	PIK3AP1,LCOR	-21854,89061
chr5:140315636-140316713	chr5	+	140316016	140316616	True	NM_018898,NM_031882,NM_002109	chr5,chr5,chr5	+,+,-	PCDHAC1,PCDHAC1,HARS	-9771,-9771,-245045
chr19:55347873-55348702	chr19	+	55347953	55348729	True	NM_012314,NM_001127255	chr19,chr19	+,-	KIR2DS4,NLRP7	-3830,110194
chr1:173837855-173838129	chr1	+	173837924	173838176	True	NR_002746,NM_032522,NR_003944,NR_037605,NR_003942,NR_003943,NR_003940,NR_003941,NR_002750,NM_001122770,NR_002578,NR_002579,NR_003939,NR_003938	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,+,-,+,-,-,-,-,-,+,-,-,-,-	SNORD47,ZBTB37,SNORD78,LOC100506046,SNORD76,SNORD77,SNORD80,SNORD75,SNORD44,ZBTB37,GAS5,SNORD74,SNORD79,SNORD81	-4341,-482,-3100,-5589,-2071,-2415,-3883,-1848,-2758,-482,-799,-1041,-3356,-4569
chr1:158298709-158300602	chr1	+	158298801	158300643	True	NM_001042583,NM_001764	chr1,chr1	+,-	CD1E,CD1B	22842,728
chr12:113841572-113842182	chr12	+	113841603	113842091	True	NM_138432,NM_006843	chr12,chr12	+,-	SDSL,SDS	18124,89
chrX:101994666-101995926	chrX	+	101994807	101995977	True	NM_001142530,NM_001142529,NM_021992	chrX,chrX,chrX	+,+,-	BHLHB9,BHLHB9,TMSB15A	4929,4929,-223108
chr19:13615363-13616413	chr19	+	13615577	13616432	True	NM_001127222,NM_001127221,NM_000068,NM_001174080,NM_023035,NM_030818	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,+	CACNA1A,CACNA1A,CACNA1A,CACNA1A,CACNA1A,CCDC130	892,892,892,892,892,242320
chr18:44523068-44524812	chr18	+	44523091	44524423	True	NM_001100817,NM_031303	chr18,chr18	-,+	TCEB3CL,KATNAL2	20006,2363
chr1:45240190-45241073	chr1	+	45240558	45241014	True	NR_001456,NR_001457,NM_153274,NR_000024,NR_000015,NM_001012	chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,+,+,+	SNORD38A,SNORD38B,BEST4,SNORD46,SNORD55,RPS8	2499,3047,12462,1149,522,231
chr3:123343027-123343930	chr3	+	123343345	123343813	True	NM_053032,NM_012430,NM_053031	chr3,chr3,chr3	-,+,-	MYLK,SEC22A,MYLK	-3815,-422622,-3815
chr6:35423602-35424382	chr6	+	35423733	35424301	True	NM_003214,NM_021922	chr6,chr6	-,+	TEAD3,FANCE	40610,-3646
chr7:48019386-48020089	chr7	+	48019556	48019988	True	NM_001100159,NM_004507,NR_037917	chr7,chr7,chr7	+,-,-	C7orf57,HUS1,HUS1	55128,-334,-334
chr4:6711739-6712134	chr4	+	6711755	6712178	True	NM_203462,NM_018366	chr4,chr4	-,+	MRFAP1L1,CNO	-149,5663
chr6:10523605-10523925	chr6	+	10523780	10523924	True	NM_145649,NR_027793	chr6,chr6	+,-	GCNT2,C6orf218	-2263,-88725
chrY:14389123-14389924	chrY	+	14389472	14389745	True	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	384552,143697
chr12:53492314-53493063	chr12	+	53492452	53493002	True	NM_002178,NM_003578,NM_032840	chr12,chr12,chr12	+,+,-	IGFBP6,SOAT2,SPRYD3	-1068,4271,-19248
chr3:33143295-33144143	chr3	+	33143405	33143650	True	NM_001039770,NM_001136238,NM_006371,NM_000404,NM_001079811,NM_001135602	chr3,chr3,chr3,chr3,chr3,chr3	-,-,+,-,-,-	TMPPE,TMPPE,CRTAP,GLB1,GLB1,GLB1	-5112,-5112,11799,-4711,-5091,-4711
chr9:140334079-140335757	chr9	+	140334114	140335802	True	NM_001033113,NM_006647,NM_198585	chr9,chr9,chr9	-,+,-	ENTPD8,NOXA1,ENTPD8	149,-16318,149
chr16:48417597-48418375	chr16	+	48417739	48418335	True	NM_003031,NM_031490	chr16,chr16	-,+	SIAH1,LONP2	944,-139591
chr11:563261-563509	chr11	+	563368	563558	True	NR_029623,NM_173573,NM_001143994,NM_001143993,NM_003475	chr11,chr11,chr11,chr11,chr11	-,-,+,+,+	MIR210,C11orf35,RASSF7,RASSF7,RASSF7	4690,-2589,-1969,-2448,-1969
chr22:43009688-43010515	chr22	+	43009923	43010439	True	NM_178136,NM_032311,NR_029422	chr22,chr22,chr22	-,-,+	POLDIP3,POLDIP3,RNU12	573,573,811
chr1:206327333-206328675	chr1	+	206327555	206328635	True	NM_001007544,NM_148964	chr1,chr1	-,+	C1orf186,CTSE	-38908,-10147
chr3:56699919-56700669	chr3	+	56700013	56700655	True	NR_024460,NM_015224	chr3,chr3	+,-	CCDC66,C3orf63	-108887,-1939
chr19:49958754-49959191	chr19	+	49959008	49959214	True	NM_153329,NM_001145396,NM_017916	chr19,chr19,chr19	+,+,-	ALDH16A1,ALDH16A1,PIH1D1	-2586,-2586,-3893
chr15:90119158-90119407	chr15	+	90119166	90119454	True	NM_152259,NR_027077	chr15,chr15	+,-	C15orf42,LOC283761	-399,-51901
chr3:111764085-111764728	chr3	+	111764354	111764742	True	NM_001042575,NR_026734,NM_001190259	chr3,chr3,chr3	+,+,-	TMPRSS7,TMPRSS7,GCET2	-5947,-5947,87460
chr8:10697366-10697673	chr8	+	10697528	10697660	True	NM_001040032,NM_017884	chr8,chr8	+,-	C8orf74,PINX1	-167432,-229
chr19:50031376-50032158	chr19	+	50031426	50032170	True	NM_020650,NR_029703	chr19,chr19	+,-	RCN3,MIR150	-602,-27301
chr11:843511-843790	chr11	+	843565	843739	True	NM_003271,NM_021128,NM_001025239,NM_001025238,NM_001025235,NM_001025234,NM_001025237,NM_001025236	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,-,+,+,+,+,+,+	TSPAN4,POLR2L,TSPAN4,TSPAN4,TSPAN4,TSPAN4,TSPAN4,TSPAN4	-792,-1036,-792,-792,-675,341,706,-675
chr19:11457174-11457403	chr19	+	11457237	11457441	True	NM_001170635,NM_001080503,NM_022737,NM_198536,NM_001145416,NM_033408,NM_004283	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,-,-,-,-	LPPR2,CCDC159,LPPR2,TMEM205,TMEM205,TMEM205,RAB3D	8620,-107,8620,-256,-256,-256,-6893
chr9:19197233-19197995	chr9	+	19197444	19197738	True	NR_038064,NM_017925	chr9,chr9	-,+	PLIN2,DENND4C	-69840,93010
chr14:100110117-100111267	chr14	+	100110205	100110915	True	NM_032425,NM_001127258,NM_001144995	chr14,chr14,chr14	+,+,-	HHIPL1,HHIPL1,CCDC85C	564,564,-39478
chr17:37782378-37782683	chr17	+	37782377	37782675	True	NM_181505,NM_006160,NM_032192	chr17,chr17,chr17	+,-,+	PPP1R1B,NEUROD2,PPP1R1B	2077,-18202,503
chr6:96025941-96027171	chr6	+	96026056	96026870	True	NM_001143957,NM_024641	chr6,chr6	-,+	GPR63,MANEA	1258533,-696
chr4:88583445-88584184	chr4	+	88583536	88584162	True	NM_004407,NM_004684	chr4,chr4	+,-	DMP1,SPARCL1	-12133,-132881
chr20:58490554-58491840	chr20	+	58491382	58491621	True	NM_001190826,NM_014258	chr20,chr20	+,-	C20orf177,SYCP2	17197,15641
chr19:664934-665620	chr19	+	664982	665282	True	NM_005860,NM_194460	chr19,chr19	+,-	FSTL3,RNF126	11106,-1749
chr1:65726069-65727740	chr1	+	65726072	65727778	True	NR_029516,NM_014787	chr1,chr1	-,+	MIR101-1,DNAJC6	-201881,2651
chr22:21906936-21907951	chr22	+	21906943	21907815	True	NM_001128635,NM_003347,NM_001128633	chr22,chr22,chr22	-,+,-	RIMBP3B,UBE2L3,RIMBP3C	-1570,14141,-1193
chr22:21906936-21907951	chr22	+	20462982	20463832	False	NM_015672,NR_026919	chr22,chr22	-,+	RIMBP3,LOC150197	-1196,-269180
chr22:21906936-21907951	chr22	-	21735632	21736479	False	NM_001128635,NR_003700,NM_001128633	chr22,chr22,chr22	+,-,+	RIMBP3B,PI4KAP2,RIMBP3C	1560,135353,1183
chr19:43245476-43245830	chr19	+	43245548	43245870	True	NR_036584,NM_021016	chr19,chr19	+,-	LOC100289650,PSG3	80144,-880
chr3:186333480-186333908	chr3	+	186333482	186333700	True	NM_001622,NM_001134415	chr3,chr3	+,-	AHSG,TBCCD1	-2683,-45150
chr3:51812434-51812671	chr3	+	51812525	51812671	True	NM_001085479,NM_001143833	chr3,chr3	+,-	IQCF3,IQCF6	49897,582
chr10:70233020-70234640	chr10	+	70233227	70234530	True	NM_030625,NM_001080449	chr10,chr10	+,-	TET1,DNA2	85586,-1497
chr5:139941683-139941967	chr5	+	139941758	139942016	True	NM_133172,NM_133173,NM_133174,NM_001035235,NM_080670,NM_006051	chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,+,-	APBB3,APBB3,APBB3,SRA1,SLC35A4,APBB3	2223,2223,2223,-4080,2403,2223
chr1:116303940-116304692	chr1	+	116304143	116304719	True	NM_001232,NM_001172412	chr1,chr1	-,+	CASQ2,VANGL1	6757,-118946
chr2:120550912-120552885	chr2	+	120551172	120552590	True	NM_002980,NM_002830	chr2,chr2	-,+	SCTR,PTPN4	-269144,-34024
chr11:18418029-18419212	chr11	+	18418080	18418554	True	NR_028500,NM_001165416,NM_001165414,NM_001165415,NM_005566,NM_181508,NM_001135239	chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,-,+	LDHA,LDHA,LDHA,LDHA,LDHA,HPS5,LDHA	-2195,-2195,-318,-2195,-2195,-74359,-2195
chr14:74485637-74485904	chr14	+	74485664	74485872	True	NM_001249,NM_025057	chr14,chr14	-,+	ENTPD5,C14orf45	204,186
chr5:87975810-87976042	chr5	+	87975831	87976043	True	NR_024383,NR_024384,NM_022650,NR_015436	chr5,chr5,chr5,chr5	-,-,+,-	LOC645323,LOC645323,RASA1,LOC645323	-1569,-6685,-1411116,4628
chr9:17578879-17579126	chr9	+	17578883	17579107	True	NM_003026,NM_017637	chr9,chr9	+,-	SH3GL2,BNC2	19,-708097
chr15:25473427-25473650	chr15	+	25473432	25473584	True	NR_003352,NR_003358,NR_003496,NR_003497,NR_003351,NR_003344,NR_003345,NR_003346,NR_003347,NM_130838,NR_003343,NR_003303,NR_003348,NR_003349,NR_003350	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,-,+,+,+,+,+	SNORD115-37,SNORD115-43,HBII-52-27,HBII-52-28,SNORD115-36,SNORD115-29,SNORD115-30,SNORD115-31,SNORD115-32,UBE3A,SNORD115-26,SNORD115-11,SNORD115-33,SNORD115-34,SNORD115-35	9548,-5090,-7833,-5982,-5090,-5090,-3133,-1227,529,177119,-9719,-5090,2400,3949,5809
chr8:133687056-133687322	chr8	+	133687141	133687361	True	NM_012472,NM_198513	chr8,chr8	-,+	LRRC6,PHF20L1	502,100242
chrX:101819502-101819898	chrX	+	101819504	101819794	True	NR_002216,NM_021992	chrX,chrX	+,-	NXF4,TMSB15A	-14662,-47805
chrX:101819502-101819898	chrX	-	101094887	101094937	False	NM_032946,NM_177948	chrX,chrX	-,+	NXF5,ARMCX3	17662,-216587
chrX:101819502-101819898	chrX	+	101574800	101574850	False	NM_022053	chrX	+	NXF2	-72681
chrX:101819502-101819898	chrX	-	101622100	101622150	False	NM_022053	chrX	-	NXF2	72753
chr16:15153137-15153742	chr16	+	15153162	15153739	True	NM_015027,NM_173474	chr16,chr16	+,-	PDXDC1,NTAN1	-84380,-3329
chr3:130613637-130614434	chr3	+	130613726	130614417	True	NM_001199185,NM_001199184,NM_001199183,NM_001199179,NM_001001485,NM_001001486,NM_001001487,NM_014065,NM_014382	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,+,+,+,-,+	ATP2C1,ATP2C1,ATP2C1,ATP2C1,ATP2C1,ATP2C1,ATP2C1,ASTE1,ATP2C1	-492,-879,-879,-949,-925,-350,-350,131287,-492
chr19:3135682-3135995	chr19	+	3135927	3135987	True	NM_198969,NM_002068	chr19,chr19	-,+	AES,GNA15	-72963,203
chr10:33245490-33246297	chr10	+	33245652	33246300	True	NM_002211,NM_133376,NM_024688	chr10,chr10,chr10	-,-,+	ITGB1,ITGB1,C10orf68	1043,572,-389052
chr20:57618519-57618731	chr20	+	57618530	57618776	True	NR_037930,NM_016045,NR_037929,NM_030773	chr20,chr20,chr20,chr20	-,-,-,+	SLMO2-ATP5E,SLMO2,SLMO2-ATP5E,TUBB1	-629,-629,-629,-24272
chr1:201913672-201915273	chr1	+	201913961	201915315	True	NM_006335,NM_012134	chr1,chr1	+,-	TIMM17A,LMOD1	9303,451
chr14:55034025-55034286	chr14	+	55034203	55034265	True	NM_004124,NM_015589,NM_001161576	chr14,chr14,chr14	-,+,+	GMFB,SAMD4A,SAMD4A	-78459,371,371
chr7:21463929-21464691	chr7	+	21464061	21464727	True	NM_003112,NM_001127370	chr7,chr7	+,-	SP4,CDCA7L	2961,520865
chr9:36037218-36037617	chr9	+	36037436	36037546	True	NM_021111,NM_019897	chr9,chr9	+,-	RECK,OR2S2	-577,-79285
chr19:2977668-2978322	chr19	+	2977749	2978235	True	NM_021217,NM_001143986,NM_024760	chr19,chr19,chr19	-,+,+	ZNF77,TLE6,TLE6	-32780,-264,-264
chr4:41363716-41365293	chr4	+	41363726	41365210	True	NM_001112717,NM_173075,NM_014988,NM_001112718	chr4,chr4,chr4,chr4	+,-,+,+	LIMCH1,APBB2,LIMCH1,LIMCH1	-973,-147091,-973,-973
chr19:4182897-4183270	chr19	+	4182913	4183319	True	NM_016539,NM_133475,NM_001193285	chr19,chr19,chr19	-,+,-	SIRT6,ANKRD24,SIRT6	-317,31,-317
chr12:109918938-109920486	chr12	+	109919334	109920489	True	NM_183415,NM_031954,NM_130466	chr12,chr12,chr12	+,-,+	UBE3B,KCTD10,UBE3B	-3955,-4179,-3955
chrX:119764221-119764886	chrX	+	119764312	119764680	True	NM_152692,NM_001137554,NM_001011551	chrX,chrX,chrX	-,+,-	C1GALT1C1,MCTS1,C1GALT1C1	-307,-25811,-307
chr17:37353134-37353565	chr17	+	37353154	37353422	True	NM_199248,NM_000981,NM_000723,NM_199247	chr17,chr17,chr17,chr17	-,+,-,-	CACNB1,RPL19,CACNB1,CACNB1	529,3113,529,529
chr10:47382961-47383400	chr10	+	47383044	47383111	True	NR_024495,NR_027634	chr10,chr10	-,+	LOC642826,FAM35B2	-139550,-3376
chr7:140860948-140862187	chr7	+	140861016	140862094	True	NM_053035,NM_001195278	chr7,chr7	-,+	MRPS33,LOC100131199	-146235,-87035
chr12:55377961-55378619	chr12	+	55377971	55378529	True	NM_001098815,NM_001136030,NM_021191	chr12,chr12,chr12	-,-,+	KIAA0748,KIAA0748,NEUROD4	-2349,-23,35199
chr3:186511804-186513299	chr3	+	186512106	186512720	True	NR_002989,NR_002588,NR_031650,NM_002916,NR_002587,NR_002586	chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,-,+,+	SNORA81,SNORA4,MIR1248,RFC4,SNORD2,SNORA63	-7706,-6768,-7709,11620,-9585,-7082
chr7:5323778-5324288	chr7	+	5323997	5324220	True	NM_153247,NM_001040661,NM_001080495	chr7,chr7,chr7	+,+,-	SLC29A4,SLC29A4,TNRC18	-1487,-1487,139012
chr4:1202727-1202987	chr4	+	1202766	1202964	True	NM_001199021,NR_033339,NR_024569	chr4,chr4,chr4	-,+,-	SPON2,C4orf42,LOC100130872	-16,40263,-16
chr14:101037106-101037743	chr14	+	101037125	101037765	True	NR_024096,NM_001159531,NM_020836	chr14,chr14,chr14	+,-,-	C14orf70,BEGAIN,BEGAIN	85839,-2718,-994
chr4:165951398-165951837	chr4	+	165951502	165951736	True	NM_001012414,NM_152620	chr4,chr4	-,+	TRIM61,TRIM60	-52684,1414
chr10:8094345-8094619	chr10	+	8094384	8094667	True	NR_024255,NR_024256,NM_002051,NM_001002295	chr10,chr10,chr10,chr10	-,-,+,+	FLJ45983,FLJ45983,GATA3,GATA3	831,831,1999,1999
chr15:50087232-50087861	chr15	+	50087353	50087837	True	NM_020234,NM_152647	chr15,chr15	+,-	DTWD1,C15orf33	-174179,-174235
chr2:171673793-171674035	chr2	+	171673831	171673947	True	NM_013445,NM_000817,NR_027433	chr2,chr2,chr2	+,+,-	GAD1,GAD1,LOC440925	-682,-682,-102754
chr16:31579833-31580069	chr16	+	31579836	31580060	True	NR_027011,NM_016633	chr16,chr16	-,+	CSDAP1,AHSP	835,-40684
chr1:20876972-20878160	chr1	+	20877272	20878154	True	NM_024544,NM_207334	chr1,chr1	-,+	MUL1,FAM43B	-42598,777
chr1:16344664-16345205	chr1	+	16344999	16345231	True	NM_014424,NM_004070,NM_001042704	chr1,chr1,chr1	-,+,+	HSPB7,CLCNKA,CLCNKA	104,3254,3254
chr15:25467346-25468347	chr15	+	25467533	25468367	True	NR_003358,NR_003495,NR_003496,NR_003497,NR_003346,NR_003344,NR_003345,NR_003351,NR_003347,NM_130838,NR_003342,NR_003343,NR_003303,NR_003348,NR_003349	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,-,+,+,+,+,+	SNORD115-43,SNORD115-24,HBII-52-27,HBII-52-28,SNORD115-31,SNORD115-29,SNORD115-30,SNORD115-36,SNORD115-32,UBE3A,SNORD115-25,SNORD115-26,SNORD115-11,SNORD115-33,SNORD115-34	25,-8785,-1941,-90,3888,25,1982,25,5746,182336,-6903,-3827,25,7617,9166
chr1:113982536-113983761	chr1	+	113982585	113983801	True	NM_152900,NM_006608	chr1,chr1	+,-	MAGI3,PHTF1	-49176,318032
chr5:175516145-175516973	chr5	+	175516186	175516864	True	NR_036494,NM_001079529	chr5,chr5	-,+	LOC643201,FAM153B	109484,-4328
chr5:175516145-175516973	chr5	+	177461816	177462495	False	NM_006261,NM_001079527	chr5,chr5	-,+	PROP1,FAM153C	-38573,-26178
chr5:175516145-175516973	chr5	-	177175301	177175979	False	NR_003615,NM_173663	chr5,chr5	+,-	LOC728554,FAM153A	126282,31576
chr11:22715904-22716983	chr11	+	22716021	22717009	True	NM_005256,NM_022725	chr11,chr11	+,-	GAS2,FANCF	-19753,-68634
chr19:41256587-41256811	chr19	+	41256632	41256860	True	NM_198476,NM_004596	chr19,chr19	-,+	C19orf54,SNRPA	-804,6
chr19:45252953-45253849	chr19	+	45252981	45253433	True	NM_005178,NR_027754	chr19,chr19	+,-	BCL3,CEACAM22P	-1054,-192831
chr5:36152347-36152847	chr5	+	36152398	36152805	True	NR_030306,NM_001007527,NM_005983,NM_032637	chr5,chr5,chr5,chr5	-,-,+,+	MIR580,LMBRD2,SKP2,SKP2	-4308,-383,-262,-262
chr16:77823356-77823614	chr16	+	77823378	77823536	True	NM_020927,NM_199355	chr16,chr16	+,-	VAT1L,ADAMTS18	-946,-354367
chr12:29890714-29891606	chr12	+	29890765	29891425	True	NM_018099,NM_001193451	chr12,chr12	+,-	FAR2,TMTC1	-514218,45370
chr9:69655180-69655627	chr9	+	69655197	69655663	True	NM_001085457,NR_024443	chr9,chr9	-,+	CBWD6,LOC100133920	-392604,-3887
chr9:69655180-69655627	chr9	-	42853685	42854151	False	NR_026759,NR_026558	chr9,chr9	-,+	FAM95B1,AQP7P3	179211,4000
chr9:69655180-69655627	chr9	-	67026672	67027138	False	NR_024443,NR_024496	chr9,chr9	-,+	LOC100133920,LOC442421	3894,-532454
chr9:69655180-69655627	chr9	+	67293245	67293711	False	NM_032250,NR_002817	chr9,chr9	+,-	ANKRD20A1,AQP7P1	633049,-3753
chrX:4463593-4464575	chrX	+	4464356	4464564	True	NR_034031,NM_004042	chrX,chrX	-,+	LOC389906,ARSF	-702421,-1479575
chr3:196229381-196229873	chr3	+	196229509	196229873	True	NM_001105573,NM_152617	chr3,chr3	+,-	FBXO45,RNF168	65851,816
chr16:27557887-27559879	chr16	+	27557986	27559591	True	NM_015202,NM_001520	chr16,chr16	+,-	KIAA0556,GTF3C1	1876,1715
chr10:72542668-72542958	chr10	+	72542744	72543006	True	NM_003901,NM_152710	chr10,chr10	+,-	SGPL1,C10orf27	32697,2201
chr11:1610714-1611845	chr11	+	1610713	1611735	True	NM_001005922,NR_021489,NM_001004325	chr11,chr11,chr11	-,+,-	KRTAP5-1,LOC338651,KRTAP5-2	-4200,-16795,7839
chr9:116161781-116162822	chr9	+	116162020	116162743	True	NM_152786,NM_000031	chr9,chr9	+,-	C9orf43,ALAD	10278,928
chr11:20623310-20624360	chr11	+	20623466	20624319	True	NM_001029865,NM_004211	chr11,chr11	-,+	DBX1,SLC6A5	-441596,-2572
chr2:31361352-31361625	chr2	+	31361385	31361673	True	NM_014600,NM_024572	chr2,chr2	+,-	EHD3,GALNT14	95206,-36
chr8:23146773-23147495	chr8	+	23146815	23147323	True	NM_001136108,NM_003844	chr8,chr8	+,-	R3HCC1,TNFRSF10A	-1254,-64135
chr19:46416810-46417253	chr19	+	46416924	46417192	True	NM_004497,NM_001029861	chr19,chr19	+,-	FOXA3,NANOS2	-49457,894
chr5:70219811-70220118	chr5	+	70220059	70220125	True	NM_022876,NM_022877,NM_022874,NM_022875,NM_000344,NM_017411,NM_004536	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,-	SMN2,SMN2,SMN1,SMN2,SMN1,SMN2,NAIP	642,642,642,642,642,642,100866
chr5:70219811-70220118	chr5	+	69344648	69344714	False	NM_022876,NM_022877,NM_022874,NM_022875,NM_000344,NM_017411,NR_024054	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,-	SMN2,SMN2,SMN1,SMN2,SMN1,SMN2,LOC100170939	635,635,635,635,635,635,176958
chr12:9065789-9066259	chr12	+	9065795	9066299	True	NM_004426,NM_002355	chr12,chr12	+,-	PHC1,M6PR	1016,36005
chr6:88102480-88104169	chr6	+	88102687	88103913	True	NR_026784,NM_198568	chr6,chr6	+,-	C6orf164,GJB7	2928,-63691
chr6:46922423-46924247	chr6	+	46922422	46924210	True	NM_005588,NM_015234	chr6,chr6	+,-	MEP1A,GPR116	-161381,-87
chr22:25779181-25779480	chr22	+	25779243	25779479	True	NM_001135772,NR_033733	chr22,chr22	-,+	LRP5L,CRYBB2P1	-1699,64574
chr17:4844057-4844269	chr17	+	4844127	4844253	True	NM_001165418,NM_005022,NM_001165417,NM_003562,NM_000173,NM_015528	chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,+,+	SLC25A11,PFN1,SLC25A11,SLC25A11,GP1BA,RNF167	-665,7622,-665,-665,-8586,-548
chr14:71994762-71995549	chr14	+	71994812	71995462	True	NM_015556,NM_033141	chr14,chr14	+,-	SIPA1L1,MAP3K9	579,-718924
chr19:50182406-50183044	chr19	+	50182443	50182809	True	NM_001571,NM_001101340,NM_198318,NM_001536,NR_033397	chr19,chr19,chr19,chr19,chr19	-,+,+,+,+	IRF3,C19orf76,PRMT1,PRMT1,PRMT1	-13311,9132,-1998,-1998,-1998
chrX:153411977-153412399	chrX	+	153411980	153412061	True	NM_020061,NM_001110792	chrX,chrX	+,-	OPN1LW,MECP2	-2306,-48792
chrX:153411977-153412399	chrX	+	153450391	153450472	False	NM_001586,NM_000513,NM_001048181	chrX,chrX,chrX	-,+,+	TEX28,OPN1MW,OPN1MW2	73045,-2357,-2357
chrX:153411977-153412399	chrX	+	153487509	153487590	False	NM_001586,NM_000513,NM_001048181	chrX,chrX,chrX	-,+,+	TEX28,OPN1MW,OPN1MW2	35927,-2357,-2357
chr19:33463778-33465003	chr19	+	33464165	33465048	True	NM_152266,NM_032816	chr19,chr19	+,-	C19orf40,CCDC123	-1068,-1296
chr17:37023741-37023945	chr17	+	37023740	37023898	True	NM_000978,NM_006148	chr17,chr17	-,+	RPL23,LASP1	-13687,2213
chr9:136934411-136934811	chr9	+	136934425	136934686	True	NM_007371,NR_015427	chr9,chr9	-,+	BRD3,NCRNA00094	-1284,-43919
chr3:15226774-15228207	chr3	+	15227146	15227962	True	NR_027927,NM_014296	chr3,chr3	-,+	COL6A4P1,CAPN7	19566,19770
chr3:49160082-49160338	chr3	+	49160119	49160201	True	NM_001199161,NM_001199160,NM_001199162,NM_173546,NM_006677	chr3,chr3,chr3,chr3,chr3	-,-,-,+,-	USP19,USP19,USP19,KLHDC8B,USP19	-1748,-1748,-1748,48816,-1748
chr17:30677385-30677596	chr17	+	30677414	30677604	True	NM_001098507,NM_022344,NM_003457,NM_001032293,NR_030362	chr17,chr17,chr17,chr17,chr17	+,-,+,+,+	ZNF207,C17orf75,ZNF207,ZNF207,MIR632	-308,-8225,-308,-308,-337
chr1:111390810-111391567	chr1	+	111391369	111391543	True	NM_001040033,NM_001006945	chr1,chr1	+,-	CD53,C1orf103	22277,115073
chr7:119463381-119463829	chr7	+	119463397	119463861	True	NM_012281,NM_012338	chr7,chr7	+,-	KCND2,TSPAN12	449860,1034366
chr5:176056465-176056687	chr5	+	176056523	176056667	True	NM_001099408,NM_003085,NR_036239,NM_001001502	chr5,chr5,chr5,chr5	+,-,-,-	EIF4E1B,SNCB,MIR4281,SNCB	1015,940,-22,940
chr1:118708809-118710405	chr1	+	118709003	118710376	True	NM_006784,NM_206996	chr1,chr1	+,-	WDR3,SPAG17	-236687,17525
chr15:81488812-81489073	chr15	+	81488865	81488995	True	NM_001172128,NM_181900	chr15,chr15	+,-	IL16,STARD5	223,127579
chr5:36282640-36283425	chr5	+	36282758	36283110	True	NM_032637,NM_001161429	chr5,chr5	+,-	SKP2,RANBP3L	-130620,18955
chr2:234830787-234831807	chr2	+	234830786	234831381	True	NM_024080,NR_024322	chr2,chr2	+,-	TRPM8,MSL3P1	-4794,-53731
chr16:31496904-31497356	chr16	+	31496955	31497333	True	NM_022744,NM_003041	chr16,chr16	-,+	C16orf58,SLC5A2	22423,-2567
chr9:99840986-99841748	chr9	+	99841026	99841766	True	NR_002942,NM_001045477	chr9,chr9	-,+	LOC340508,FAM22G	2511,-149791
chr21:44314247-44315446	chr21	+	44314810	44315054	True	NM_018669,NM_021075,NM_001001503	chr21,chr21,chr21	-,+,+	WDR4,NDUFV3,NDUFV3	-15132,-1492,-1492
chr3:189509996-189510317	chr3	+	189510011	189510321	True	NM_018192,NM_001114980,NM_001114981,NM_001114982	chr3,chr3,chr3,chr3	-,+,+,+	LEPREL1,TP63,TP63,TP63	328642,-2613,-2613,-2613
chr13:100636274-100636738	chr13	+	100636279	100636628	True	NM_033132,NM_007129	chr13,chr13	-,+	ZIC5,ZIC2	-12101,-2306
chr19:48017196-48017402	chr19	+	48017381	48017449	True	NM_015711,NM_003827	chr19,chr19	+,-	GLTSCR1,NAPA	94003,1098
chr11:119057011-119057992	chr11	+	119057213	119057978	True	NM_001168468,NM_024791,NM_001145018,NR_033122	chr11,chr11,chr11,chr11	+,+,-,+	PDZD3,PDZD3,CCDC153,PDZD3	-1098,-1098,8656,-1098
chr19:37667050-37667884	chr19	+	37667239	37667623	True	NM_152655,NM_152604,NM_199126	chr19,chr19,chr19	-,+,-	ZNF585A,ZNF383,ZNF585A	-3624,49742,-3906
chr17:1304674-1305191	chr17	+	1304874	1305022	True	NM_006761,NR_024058,NR_028514	chr17,chr17,chr17	-,-,+	YWHAE,YWHAE,LOC100306951	-1318,-1318,115190
chr2:97427191-97427440	chr2	+	97427213	97427479	True	NR_024521,NM_020184	chr2,chr2	-,+	LMAN2L,CNNM4	-21400,-625
chr3:10547442-10548133	chr3	+	10547489	10548105	True	NM_001683,NR_024146,NM_001001331	chr3,chr3,chr3	-,+,-	ATP2B2,GHRLOS,ATP2B2	-221,-220102,-221
chr7:21464691-21465457	chr7	+	21464691	21465409	True	NM_003112,NM_001127370	chr7,chr7	+,-	SP4,CDCA7L	2279,520194
chr13:19794974-19795755	chr13	+	19795225	19795622	True	NM_006001,NR_034026	chr13,chr13	-,+	TUBA3C,LOC100287114	-39233,123566
chr19:54875028-54875296	chr19	+	54875040	54875202	True	NM_002287,NM_021706,NM_001005367	chr19,chr19,chr19	-,-,+	LAIR1,LAIR1,TTYH1	1569,1569,51402
chr18:12068147-12068440	chr18	+	12068167	12068287	True	NM_023075,NM_014214	chr18,chr18	-,+	MPPE1,IMPA2	-159526,-86791
chr4:6762873-6763483	chr4	+	6762923	6763391	True	NM_001100590,NM_203462	chr4,chr4	+,-	KIAA0232,MRFAP1L1	21067,-51317
chr16:29082074-29082967	chr16	+	29082595	29082704	True	NM_024816,NR_003369	chr16,chr16	-,+	RABEP2,RRN3P2	-146063,3458
chr16:29082074-29082967	chr16	-	28448953	28449062	False	NM_001199142,NM_018690	chr16,chr16	-,+	EIF3C,APOBR	-11178,56930
chr16:29082074-29082967	chr16	+	28688588	28688697	False	NM_001199142,NM_177536	chr16,chr16	+,-	EIF3C,SULT1A1	11181,-53722
chr16:29082074-29082967	chr16	+	28802763	28802872	False	NM_003321,NM_145714	chr16,chr16	-,+	TUFM,ATXN2L	54916,31541
chr2:201367675-201368901	chr2	+	201367859	201368515	True	NM_152387,NM_001160046	chr2,chr2	-,+	KCTD18,SGOL2	6327,22349
chr10:7740419-7742339	chr10	+	7740779	7741735	True	NM_001001851,NM_002216	chr10,chr10	-,+	ITIH5,ITIH2	-31818,3500
chr19:16147082-16147640	chr19	+	16147093	16147611	True	NR_024336,NR_024335,NM_021187	chr19,chr19,chr19	+,+,-	FLJ25328,FLJ25328,CYP4F11	-1855,-2621,-101417
chr19:52132840-52133320	chr19	+	52132849	52133313	True	NM_007147,NM_003830	chr19,chr19	+,-	ZNF175,SIGLEC5	-58369,464
chr19:52132840-52133320	chr19	+	52149273	52149737	False	NR_029843,NM_001098612	chr19,chr19	+,-	MIR99B,SIGLEC14	46127,445
chr4:95133796-95135570	chr4	+	95133982	95135080	True	NM_001128429,NM_020159,NM_001128430,NM_014485	chr4,chr4,chr4,chr4	+,+,+,-	SMARCAD1,SMARCAD1,SMARCAD1,HPGDS	-5017,-5017,-5274,129003
chr13:60712016-60712255	chr13	+	60712152	60712276	True	NM_001042517,NM_001146071	chr13,chr13	-,+	DIAPH3,TDRD3	25893,258314
chr7:141895314-141895630	chr7	+	141895512	141895686	True	NR_024346,NR_003717	chr7,chr7	-,+	MOXD2P,LOC100124692	51258,-24600
chr12:119775877-119776556	chr12	+	119776025	119776583	True	NR_024246,NM_178499	chr12,chr12	-,+	LOC144742,CCDC60	-34840,-3573
chr1:157780384-157782144	chr1	+	157780383	157782156	True	NM_001159397,NM_018240,NM_052938,NM_001159398	chr1,chr1,chr1,chr1	-,+,-,-	FCRL1,KIRREL,FCRL1,FCRL1	7834,180906,7834,7834
chr10:15002116-15002508	chr10	+	15002120	15002400	True	NM_001080836,NM_001033858,NM_022487,NM_001033857,NM_001033855	chr10,chr10,chr10,chr10,chr10	+,-,-,-,-	MEIG1,DCLRE1C,DCLRE1C,DCLRE1C,DCLRE1C	-733,-6026,-6026,-6026,-6026
chr5:154236034-154236338	chr5	+	154236162	154236229	True	NM_032385,NM_004779	chr5,chr5	-,+	C5orf4,CNOT8	-5949,1968
chr4:134070312-134070690	chr4	+	134070326	134070729	True	NM_032961,NM_001114734,NM_020815	chr4,chr4,chr4	+,-,+	PCDH10,PABPC4L,PCDH10	17,1052231,17
chr12:122689608-122690825	chr12	+	122689749	122690629	True	NM_030765,NM_019887	chr12,chr12	+,-	B3GNT4,DIABLO	-1572,21489
chrX:79829111-79829536	chr2	-	75100970	75101020	False	NM_138804,NM_000189	chr2,chr2	-,+	C2orf65,HK2	-225806,-41239
chrX:79829111-79829536	chrX	+	79829147	79829515	True	NM_152630,NM_153252	chrX,chrX	+,-	FAM46D,BRWD3	-153252,235768
chr4:95698896-95700838	chr4	+	95699268	95700493	True	NM_001203,NM_014485	chr4,chr4	+,-	BMPR1B,HPGDS	-20200,-435241
chrX:131263139-131263650	chrX	+	131263345	131263690	True	NM_001042452,NM_194277	chrX,chrX	+,-	MST4,FRMD7	-105760,-1295
chr7:97839700-97839909	chr7	+	97839793	97839923	True	NM_015395,NM_177455	chr7,chr7	-,+	TECPR1,BHLHA15	41595,1642
chr22:26886688-26888053	chr22	+	26887094	26888102	True	NM_001013694,NM_022081	chr22,chr22	+,-	SRRD,HPS4	-7295,-7274
chr16:70287432-70288158	chr16	+	70287496	70288108	True	NM_058219,NM_001014449	chr16,chr16	-,+	EXOSC6,DDX19B	-1663,44963
chrX:14890785-14891127	chrX	+	14890863	14891009	True	NM_152633,NM_001018113,NM_152581	chrX,chrX,chrX	-,-,+	FANCB,FANCB,MOSPD2	225,225,517
chr4:123653997-123655487	chr4	+	123654033	123655218	True	NM_001178007,NM_152618,NR_024041	chr4,chr4,chr4	+,+,-	BBS12,BBS12,CETN4P	-227,-227,-420
chr12:7283648-7284047	chr12	+	7283674	7284060	True	NM_014718,NM_031491	chr12,chr12	+,-	CLSTN3,RBP5	-758,-2208
chr1:2123968-2124332	chr1	+	2123980	2124162	True	NM_003036,NR_024445,NM_182533	chr1,chr1,chr1	+,-,-	SKI,LOC100128003,C1orf86	35971,912,2102
chr19:14802647-14803415	chr19	+	14802799	14803205	True	NM_032433,NM_032571	chr19,chr19	+,-	ZNF333,EMR3	-1981,-17069
chr5:64778462-64779048	chr5	+	64778681	64779037	True	NM_015342,NM_197941	chr5,chr5	+,-	PPWD1,ADAMTS6	80093,-977
chr5:11903357-11903649	chr5	+	11903426	11903605	True	NM_001332,NR_033383	chr5,chr5	-,+	CTNND2,TAG	555,671363
chr1:158906878-158907392	chr1	+	158907011	158907187	True	NM_004833,NM_152501,NM_198930,NM_198928,NM_198929	chr1,chr1,chr1,chr1,chr1	-,+,+,+,+	AIM2,PYHIN1,PYHIN1,PYHIN1,PYHIN1	139520,-5720,-5720,-5720,-5720
chr9:136344899-136345565	chr9	+	136344946	136345358	True	NM_017586,NM_001145099,NM_017585	chr9,chr9,chr9	+,-,-	C9orf7,SLC2A6,SLC2A6	-19910,-670,-670
chr5:174153522-174154041	chr5	+	174153674	174154027	True	NM_002449,NM_000794	chr5,chr5	+,-	MSX2,DRD1	-2156,717193
chr17:48071864-48072083	chr17	+	48071890	48072130	True	NM_005220,NM_001934	chr17,chr17	-,+	DLX3,DLX4	508,-21812
chr3:138450134-138450508	chr3	+	138450383	138450553	True	NM_018147,NM_006219	chr3,chr3	+,-	FAIM,PIK3CB	-122522,27684
chr2:122494875-122495104	chr2	+	122494875	122495009	True	NM_032390,NM_004622	chr2,chr2	-,+	MKI67IP,TSN	-372,18111
chr10:105726090-105726543	chr10	+	105726258	105726558	True	NM_024928,NM_014720	chr10,chr10	-,+	OBFC1,SLK	-48213,911
chr12:121165632-121166043	chr12	+	121165659	121165749	True	NM_000017,NM_198202	chr12,chr12	+,-	ACADS,POP5	-2141,-146458
chr7:27134600-27135280	chr7	+	27134600	27135269	True	NM_005522,NM_153620,NM_006735,NR_002795	chr7,chr7,chr7,chr7	-,-,-,+	HOXA1,HOXA1,HOXA2,HOXA11-AS1	406,406,7175,89757
chrX:20006125-20006609	chrX	+	20006133	20006610	True	NR_024440,NM_001173456	chrX,chrX	-,+	LOC729609,PDHA1	1345,-644173
chr11:125035581-125035847	chr11	+	125035626	125035814	True	NM_001080546,NM_022062	chr11,chr11	-,+	TMEM218,PKNOX2	-62421,-1118
chr7:100252640-100253618	chr7	+	100252651	100253614	True	NM_005273,NM_016188	chr7,chr7	+,-	GNB2,ACTL6B	17748,520
chr6:122955339-122955941	chr6	+	122955575	122955889	True	NM_020755,NM_181795	chr6,chr6	-,+	SERINC1,PKIB	-162623,-24249
chr3:36941701-36942086	chr3	+	36941730	36942114	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	44484,92726
chr11:104836842-104838028	chr11	+	104836920	104837995	True	NM_001225,NM_001077244,NM_033306	chr11,chr11,chr11	-,+,-	CASP4,GRIA4,CASP4	1389,642804,-9498
chr4:37247401-37249322	chr4	+	37247472	37249012	True	NM_001085399,NM_001144990	chr4,chr4	-,+	RELL1,KIAA1239	439049,-833
chr2:175116260-175117004	chr2	+	175116260	175116765	True	NM_013341,NM_001011708,NM_001145250	chr2,chr2,chr2	-,-,+	OLA1,OLA1,SP9	-2895,-2895,83055
chr19:58567871-58568534	chr19	+	58567916	58568560	True	NM_001164530,NM_001145543,NM_007134,NM_003436,NM_001164529,NM_001164527	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+	ZNF135,ZSCAN18,ZNF135,ZNF135,ZNF135,ZNF135	2046,41220,2046,2046,2046,2046
chr1:22466395-22467262	chr1	+	22466593	22467175	True	NM_030761,NM_001791	chr1,chr1	-,+	WNT4,CDC42	2394,-87524
chr15:22832090-22832352	chr15	+	22832135	22832257	True	NR_027407,NM_001102610,NM_052903	chr15,chr15,chr15	-,+,+	GOLGA8DP,TUBGCP5,TUBGCP5	-116407,1137,1137
chr15:22832090-22832352	chr15	+	22825098	22825917	False	NR_027407,NM_001102610,NM_052903	chr15,chr15,chr15	-,+,+	GOLGA8DP,TUBGCP5,TUBGCP5	-109370,7477,7477
chr2:64244393-64245649	chr2	+	64244520	64245520	True	NM_006759,NM_016516,NM_001005739	chr2,chr2,chr2	+,-,-	UGP2,VPS54,VPS54	-175565,744,744
chr10:95530190-95531587	chr10	+	95530295	95531359	True	NM_005097,NM_145246	chr10,chr10	+,-	LGI1,FRA10AC1	-12784,-67966
chr12:57080317-57080824	chr12	+	57080523	57080861	True	NM_003725,NM_006601	chr12,chr12	+,-	HSD17B6,PTGES3	76246,1267
chr4:140473196-140473664	chr4	+	140473242	140473702	True	NM_031296,NM_030648	chr4,chr4	+,-	RAB33B,SETD7	-98341,3925
chr1:197107573-197108446	chr1	+	197107801	197108445	True	NM_018136,NM_001193640	chr1,chr1	-,+	ASPM,CRB1	7429,128888
chr15:25678489-25680085	chr15	+	25678754	25680035	True	NM_130839,NR_001295	chr15,chr15	-,+	UBE3A,SNORD109A	4143,-155321
chr9:85046695-85047245	chr9	+	85046823	85047219	True	NM_152573,NM_001001670	chr9,chr9	-,+	RASEF,FAM75D1	630874,-443187
chr12:7341664-7342316	chr12	+	7342018	7342188	True	NM_000319,NM_031491,NM_001131026,NM_001131024,NM_001131025,NM_001131023	chr12,chr12,chr12,chr12,chr12,chr12	+,-,+,+,+,+	PEX5,RBP5,PEX5,PEX5,PEX5,PEX5	769,-60552,-311,93,93,93
chr22:39637669-39638257	chr22	+	39637723	39638246	True	NM_145731,NM_002608,NM_033016	chr22,chr22,chr22	+,-,-	SYNGR1,PDGFB,PDGFB	107707,2761,-809
chr12:69327930-69328848	chr12	+	69328043	69328615	True	NM_001005502,NM_198320,NM_002392	chr12,chr12,chr12	-,-,+	CPM,CPM,MDM2	-1064,-1064,-126123
chrX:13722892-13724041	chrX	+	13723106	13724080	True	NM_004251,NM_001011658	chrX,chrX	+,-	RAB9A,TRAPPC2	-15922,28725
chr12:6708578-6708916	chr12	+	6708669	6708859	True	NM_001273,NM_002046	chr12,chr12	-,+	CHD4,GAPDH	7742,-65063
chr6:43597045-43597365	chr6	+	43597103	43597403	True	NM_014628,NM_001003690,NM_019096	chr6,chr6,chr6	+,+,-	MAD2L1BP,MAD2L1BP,GTPBP2	6173,11,-167
chr10:103579697-103580228	chr10	+	103579811	103580159	True	NR_036114,NM_012215,NM_001142434	chr10,chr10,chr10	+,-,-	MIR3158-1,MGEA5,MGEA5	-218689,-1589,-1589
chr8:128151854-128153538	chr8	+	128152371	128153394	True	NM_001159542,NR_024393	chr8,chr8	+,-	POU5F1B,LOC727677	274462,341040
chrX:8697728-8698518	chrX	+	8697880	8698533	True	NM_001001888,NM_000216	chrX,chrX	+,-	VCX3B,KAL1	-265061,1744
chr10:17222259-17224025	chr10	+	17222666	17224058	True	NM_003380,NM_004412	chr10,chr10	+,-	VIM,TRDMT1	46199,20062
chr9:139924445-139925080	chr9	+	139924593	139925123	True	NM_004479,NM_001606,NM_212533,NM_207511	chr9,chr9,chr9,chr9	-,-,-,+	FUT7,ABCA2,ABCA2,C9orf139	2219,-1853,-1219,-2728
chr14:24663048-24664109	chr14	+	24663324	24664140	True	NM_006405,NM_001014842,NM_001184739,NM_024658	chr14,chr14,chr14,chr14	-,-,+,-	TM9SF1,TM9SF1,TSSK4,IPO4	792,792,10785,-5200
chr17:12693741-12693965	chr17	+	12693795	12693927	True	NM_014859,NM_001165962	chr17,chr17	+,-	ARHGAP44,ELAC2	-1017,227504
chr11:64940255-64940667	chr11	+	64940309	64940709	True	NM_001198870,NM_001198869,NM_001198868,NM_001008778,NM_005186,NM_172230	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,-	CAPN1,CAPN1,CAPN1,SPDYC,CAPN1,SYVN1	8594,8440,7976,-2653,8594,-38306
chr2:21022585-21022853	chr2	+	21022606	21022800	True	NM_021925,NM_182828	chr2,chr2	-,+	C2orf43,GDF7	77,-156233
chr5:159846257-159847216	chr5	+	159846267	159847251	True	NM_006425,NM_004219	chr5,chr5	-,+	SLU7,PTTG1	-99,1613
chr14:93274969-93276158	chr14	+	93275099	93275857	True	NM_005606,NM_005113	chr14,chr14	-,+	LGMN,GOLGA5	-60052,-14502
chr6:111194421-111195234	chr6	+	111194622	111195234	True	NM_001634,NM_015076,NM_001033059	chr6,chr6,chr6	+,-,+	AMD1,CDK19,AMD1	752,-58210,753
chr1:231162980-231163355	chr1	+	231163040	231163342	True	NM_022786,NR_031593	chr1,chr1	+,-	ARV1,MIR1182	-48268,-7370
chr17:73150666-73151646	chr17	+	73150828	73151640	True	NM_016185,NM_001002032,NM_001002033,NM_024585	chr17,chr17,chr17,chr17	-,-,-,+	HN1,HN1,HN1,ARMC7	-53,-54,-54,-44797
chr15:85196694-85197519	chr15	+	85196844	85197548	True	NR_004859,NM_032856,NM_021077,NM_205858	chr15,chr15,chr15,chr15	+,-,-,-	SCAND2,WDR73,NMB,NMB	-22204,23,4304,4304
chr17:1531435-1531725	chr17	+	1531435	1531725	True	NM_001163673,NM_152346	chr17,chr17	+,-	WDR81,SLC43A2	88091,455
chr12:7025587-7025788	chr12	+	7025619	7025705	True	NM_032641,NM_001007026,NM_001975	chr12,chr12,chr12	-,+,+	SPSB2,ATN1,ENO2	-43098,7920,-2056
chr10:102296113-102296804	chr10	+	102296156	102296768	True	NM_017902,NM_005004	chr10,chr10	+,-	HIF1AN,NDUFB8	-566,-6520
chr2:65435643-65435913	chr2	+	65435756	65435840	True	NM_001005386,NM_015543	chr2,chr2	+,-	ACTR2,RAB1A	18988,-78321
chr7:133978427-133978635	chr7	+	133978438	133978520	True	NM_144648,NM_032826	chr7,chr7	+,-	LRGUK,SLC35B4	-166384,23357
chr4:80940493-80941339	chr4	+	80940577	80941262	True	NM_020226,NM_058172	chr4,chr4	+,-	PRDM8,ANTXR2	165161,53266
chr19:58894233-58894509	chr19	+	58894238	58894484	True	NM_138466,NM_001009,NM_001129730	chr19,chr19,chr19	-,+,-	ZNF837,RPS5,ZNF837	-1849,4151,-1849
chr19:48386382-48387085	chr19	+	48386391	48386939	True	NM_003167,NR_004437	chr19,chr19	-,+	SULT2A1,SNAR-A12	2765,23995
chr9:125791004-125791952	chr9	+	125791015	125791937	True	NR_030331,NM_005294	chr9,chr9	-,+	MIR600,GPR21	82040,4908
chr18:51882161-51883322	chr18	+	51882165	51883330	True	NM_173529,NM_139171	chr18,chr18	+,-	C18orf54,STARD6	1840,-1222
chr17:78235280-78235495	chr17	+	78235381	78235533	True	NM_000199,NM_020914,NM_020954	chr17,chr17,chr17	-,+,+	SGSH,RNF213,RNF213	-41182,-765,-765
chrX:51150427-51150862	chrX	+	51150490	51150898	True	NM_018159,NM_153183	chrX,chrX	-,+	NUDT11,NUDT10	88611,-75458
chr19:785161-785781	chr19	+	785249	785762	True	NM_024888,NM_002819	chr19,chr19	-,+	LPPR3,PTBP1	36249,11629
chr15:44038011-44038318	chr15	+	44038023	44038303	True	NR_002318,NM_005313	chr15,chr15	-,+	CATSPER2P1,PDIA3	243,286
chr15:44038011-44038318	chr15	+	43940712	43940782	False	NM_054020,NM_172097,NM_172095,NM_001015001	chr15,chr15,chr15,chr15	-,-,-,+	CATSPER2,CATSPER2,CATSPER2,CKMT1A	307,307,307,44301
chr8:89313450-89314789	chr8	+	89313692	89314778	True	NM_005941,NM_173538	chr8,chr8	-,+	MMP16,CNBD1	24997,-1435086
chr14:71950596-71952007	chr14	+	71950673	71951962	True	NR_027046,NM_033141	chr14,chr14	+,-	LOC145474,MAP3K9	2615,-674785
chr11:67251162-67251376	chr11	+	67251166	67251423	True	NM_003977,NM_025124	chr11,chr11	+,-	AIP,TMEM134	-712,-14435
chr13:25495300-25496541	chr13	+	25495410	25496517	True	NM_018451,NM_031277	chr13,chr13	-,+	CENPJ,RNF17	625,-157167
chr8:27695528-27696654	chr8	+	27695565	27696326	True	NM_001017420,NM_018492	chr8,chr8	+,-	ESCO2,PBK	-63571,-216
chr10:128080266-128081031	chr10	+	128080278	128080786	True	NM_021641,NM_145235,NM_003474	chr10,chr10,chr10	-,+,-	ADAM12,FANK1,ADAM12	-3151,-495221,-3151
chr7:6899343-6899984	chr7	+	6899593	6899895	True	NM_198097,NM_173565	chr7,chr7	-,+	C7orf28B,RSPH10B	-33667,-105905
chr16:15745923-15746788	chr16	+	15746211	15746475	True	NM_001143979,NM_001184998,NM_014647,NR_030159,NM_001184999,NM_017668	chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,+,-,+	NDE1,KIAA0430,KIAA0430,MIR484,KIAA0430,NDE1	-9144,-9188,-9188,-9117,-9188,-2185
chr1:239853822-239855352	chr1	+	239854167	239855363	True	NM_000740,NM_022469	chr1,chr1	+,-	CHRM3,GREM2	-61846,920149
chr2:162167293-162167674	chr2	+	162167292	162167494	True	NM_001935,NM_005805	chr2,chr2	-,+	DPP4,PSMD14	763608,-2557
chr19:35841674-35841950	chr19	+	35841709	35841945	True	NM_005303,NM_152481,NM_005304	chr19,chr19,chr19	+,-,+	FFAR1,FAM187B,FFAR3	499,-122081,7542
chr19:35841674-35841950	chr19	+	35854189	35854239	False	NM_207392,NM_005304	chr19,chr19	-,+	KRTDAP,FFAR3	127167,-4752
chr2:97532474-97532731	chr2	+	97532526	97532688	True	NM_016466,NM_017789,NM_199078	chr2,chr2,chr2	-,-,+	ANKRD39,SEMA4C,CNNM3	-8770,3097,-50586
chr13:51659034-51660039	chr13	+	51659056	51659821	True	NR_003923,NM_145019	chr13,chr13	-,+	GUCY1B2,FAM124A	-18763,136685
chr16:4673231-4674176	chr16	+	4673240	4674118	True	NM_001142289,NM_001142291,NM_001142290,NM_015246,NM_145253	chr16,chr16,chr16,chr16,chr16	+,+,+,+,-	MGRN1,MGRN1,MGRN1,MGRN1,FAM100A	707,707,707,707,-8313
chr22:45150538-45151229	chr22	+	45150606	45151256	True	NM_138415,NM_181335,NM_001198726,NM_001017526	chr22,chr22,chr22,chr22	-,+,+,+	PHF21B,ARHGAP8,ARHGAP8,ARHGAP8	254375,-2219,-2219,-2219
chr13:51694542-51695762	chr13	+	51694569	51695664	True	NR_003923,NM_145019	chr13,chr13	-,+	GUCY1B2,FAM124A	-54276,100842
chr8:143868894-143869229	chr8	+	143868941	143869171	True	NM_002066,NM_003695,NM_023946,NM_177457	chr8,chr8,chr8,chr8	+,-,-,-	GML,LY6D,LYNX1,LYNX1	47045,-933,-9302,-9301
chr9:116064935-116066096	chr9	+	116065052	116066134	True	NM_145051,NM_004697	chr9,chr9	-,+	RNF183,PRPF4	-3732,-27129
chr7:148938138-148938348	chr7	+	148938164	148938237	True	NM_012256,NM_001001661	chr7,chr7	+,-	ZNF212,ZNF425	-1473,-114726
chr22:30940982-30942089	chr22	+	30941018	30941739	True	NM_001193336,NM_000355	chr22,chr22	-,+	LOC730005,TCN2	989,61330
chrX:77356922-77357907	chrX	+	77357019	77357668	True	NM_000291,NM_015975	chrX,chrX	+,-	PGK1,TAF9B	1997,37578
chr14:22038164-22039928	chr14	+	22038260	22039602	True	NM_001001912,NM_014828,NM_001005465	chr14,chr14,chr14	+,+,-	OR4E2,TOX4,OR10G3	93694,-92976,69
chr16:30367155-30368170	chr16	+	30367194	30368204	True	NR_024465,NM_013292,NM_006110	chr16,chr16,chr16	-,+,-	CD2BP2,MYLPF,CD2BP2	-939,17918,-512
chr22:44351599-44352879	chr22	+	44351648	44352850	True	NM_138814,NM_015380	chr22,chr22	-,+	PNPLA5,SAMM50	-63755,-438
chr16:67309951-67310179	chr16	+	67309985	67310187	True	NM_013241,NM_015432,NM_001129728,NM_001129729,NM_001129727,NM_001129731	chr16,chr16,chr16,chr16,chr16,chr16	-,+,+,+,+,+	FHOD1,PLEKHG4,PLEKHG4,PLEKHG4,PLEKHG4,PLEKHG4	-28560,1225,2862,3301,1888,3304
chr2:175221164-175223125	chr2	+	175221437	175222783	True	NM_001145250,NM_004882	chr2,chr2	+,-	SP9,CIR1	-21675,37710
chr1:27307174-27308351	chr1	+	27307315	27308344	True	NM_152365,NM_001013642	chr1,chr1	-,+	C1orf172,TRNP1	-20414,11850
chr3:164913179-164914528	chr3	+	164913188	164914404	True	NM_001122752,NM_014926	chr3,chr3	+,-	SERPINI1,SLITRK3	2539027,115
chr4:22698755-22699814	chr4	+	22698811	22699851	True	NM_001128432,NM_145290,NM_020973	chr4,chr4,chr4	+,-,+	GBA3,GPR125,GBA3	-4322,-181139,-4322
chr9:69136550-69137805	chr2	-	114309740	114309790	True	NR_026821,NR_024005	chr2,chr2	+,-	FAM138B,DDX11L2	25168,49413
chr9:69136550-69137805	chr9	+	69136912	69137768	False	NR_002836,NM_001098805	chr9,chr9	-,+	PGM5P2,ANKRD20A4	10136,244212
chr9:69136550-69137805	chr9	+	63140	63190	False	NR_026822,NM_203447	chr9,chr9	-,+	FAM138C,DOCK8	-27276,151674
chr9:69136550-69137805	chr9	-	70982910	70982974	False	NR_015423,NM_021965	chr9,chr9	-,+	LOC572558,PGM5	-10153,-11160
chr14:23759656-23761647	chr14	+	23759690	23761265	True	NM_004050,NM_020834	chr14,chr14	+,-	BCL2L2,HOMEZ	14705,-4381
chr12:6975498-6976122	chr12	+	6975560	6976070	True	NM_032641,NM_000365,NM_001146316,NR_027483,NM_001159287	chr12,chr12,chr12,chr12,chr12	-,+,-,+,+	SPSB2,TPI1,SPSB2,TPI1,TPI1	6501,622,6429,1207,513
chr20:31350839-31351141	chr20	+	31350858	31351102	True	NM_006892,NM_175848,NM_175849,NM_053041	chr20,chr20,chr20,chr20	+,+,+,-	DNMT3B,DNMT3B,DNMT3B,COMMD7	-718,-718,-718,-19044
chr16:58279586-58280510	chr16	+	58280060	58280317	True	NM_014157,NM_001142302,NM_001896	chr16,chr16,chr16	+,+,-	CCDC113,CCDC113,CSNK2A2	3522,3522,-48278
chr21:46116707-46117245	chr21	+	46116755	46116911	True	NM_181686,NM_198699,NM_144991	chr21,chr21,chr21	-,+,-	KRTAP12-1,KRTAP10-12,TSPEAR	-14677,175,14634
chr9:113077676-113078268	chr9	+	113077702	113077844	True	NM_001136562,NM_001003936	chr9,chr9	+,-	AKAP2,TXNDC8	-189975,22341
chr2:158476349-158477047	chr2	+	158476573	158477095	True	NM_001111033,NM_001111032,NM_014568,NM_145259	chr2,chr2,chr2,chr2	-,-,+,-	ACVR1C,ACVR1C,GALNT5,ACVR1C	8364,8364,-362288,8364
chr19:45448411-45449299	chr19	+	45448469	45449293	True	NM_001646,NM_001294,NR_037932,NM_000483,NM_001199468,NM_145288	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,-	APOC4,CLPTM1,APOC4-APOC2,APOC2,CLPTM1,ZNF296	-3025,9305,-3025,-55,9305,130445
chr22:47157931-47158151	chr22	+	47157931	47158159	True	NM_022766,NM_014346	chr22,chr22	-,+	CERK,TBC1D22A	-23779,358
chrX:131227228-131228339	chrX	+	131227310	131228121	True	NM_001042452,NM_194277	chrX,chrX	+,-	MST4,FRMD7	-69726,33980
chr10:70286277-70286791	chr10	+	70286408	70286776	True	NM_030625,NM_152707	chr10,chr10	+,-	TET1,SLC25A16	33340,554
chr10:35465426-35466520	chr10	+	35465628	35466569	True	NM_001198777,NM_182769,NM_182770,NM_182771,NM_182772	chr10,chr10,chr10,chr10,chr10	-,+,+,+,+	CUL2,CREM,CREM,CREM,CREM	-86058,-1168,-1168,-9225,-9225
chr8:145736437-145736920	chr8	+	145736495	145736931	True	NM_005309,NM_004260,NM_014665,NM_138431	chr8,chr8,chr8,chr8	+,-,+,+	GPT,RECQL4,LRRC14,MFSD3	-7081,6329,6431,-1994
chr1:212784732-212785297	chr1	+	212784835	212785274	True	NM_001674,NM_018664,NM_001040619	chr1,chr1,chr1	+,-,+	ATF3,BATF3,ATF3	-2892,88116,-2892
chr9:42858603-42858930	chr9	+	42858758	42858978	True	NR_026759,NR_026558	chr9,chr9	-,+	FAM95B1,AQP7P3	174384,-658
chr9:42858603-42858930	chr9	-	33401727	33401777	False	NM_001170,NM_002504	chr9,chr9	-,+	AQP7,NFX1	790,-111360
chr9:42858603-42858930	chr9	-	69650491	69650541	False	NM_001085457,NR_024443	chr9,chr9	-,+	CBWD6,LOC100133920	-387898,819
chr9:42858603-42858930	chr9	-	67288540	67288590	False	NM_032250,NR_002817	chr9,chr9	+,-	ANKRD20A1,AQP7P1	638170,952
chr9:42858603-42858930	chr9	+	67031747	67031851	False	NR_024443,NR_024496	chr9,chr9	-,+	LOC100133920,LOC442421	-765,-537530
chr2:25262795-25263233	chr2	+	25262932	25263172	True	NM_016544,NM_014971	chr2,chr2	-,+	DNAJC27,EFR3B	-67969,1800
chr3:42626475-42627805	chr3	+	42626675	42627696	True	NM_032970,NM_004206,NM_016305,NM_001201584	chr3,chr3,chr3,chr3	-,-,+,-	SEC22C,SEC22C,SS18L2,SEC22C	-3155,-3155,4601,-3155
chr7:128787596-128789162	chr7	+	128787829	128789102	True	NM_178562,NR_034053	chr7,chr7	+,-	TSPAN33,TNPO3	-3169,-92602
chr6:100019333-100019718	chr6	+	100019502	100019591	True	NM_005190,NM_021620,NM_001013399	chr6,chr6,chr6	-,+,-	CCNC,PRDM13,CCNC	-2812,35058,-2812
chr13:41239694-41239940	chr13	+	41239717	41239861	True	NM_002015,NM_014252	chr13,chr13	-,+	FOXO1,SLC25A15	923,123685
chr1:40253153-40253475	chr1	+	40253164	40253494	True	NM_001720,NM_001195007	chr1,chr1	-,+	BMP8B,PPIE	1089,-48698
chr1:40253153-40253475	chr1	-	39958384	39958437	False	NR_003929,NM_181809	chr1,chr1	-,+	PPIEL,BMP8A	66986,-1120
chr20:19997055-19997582	chr20	+	19997107	19997631	True	NM_181527,NM_181528,NM_016100,NM_016652	chr20,chr20,chr20,chr20	+,+,+,-	NAA20,NAA20,NAA20,CRNKL1	911,305,305,39112
chr16:29690402-29690832	chr16	+	29690487	29690673	True	NR_002593,NM_014298	chr16,chr16	-,+	SLC7A5P1,QPRT	-65449,-97
chr4:126237219-126237419	chr4	+	126237310	126237444	True	NM_024582,NM_001167882	chr4,chr4	+,-	FAT4,ANKRD50	122,-603423
chr22:43584533-43585532	chr22	+	43584635	43585396	True	NM_015140,NM_007311	chr22,chr22	-,+	TTLL12,TSPO	-1498,-37151
chr1:57045697-57046642	chr1	+	57045730	57046545	True	NM_003713,NM_006252	chr1,chr1	-,+	PPAP2B,PRKAA2	-473,64444
chr1:228596978-228598043	chr1	+	228597161	228597785	True	NM_001024940,NM_175055,NM_001134855,NM_145214,NM_016102	chr1,chr1,chr1,chr1,chr1	-,+,-,-,-	TRIM17,HIST3H2BB,TRIM17,TRIM11,TRIM17	6848,48022,6848,-2644,6848
chr1:235531514-235532543	chr1	+	235531563	235532542	True	NM_001079515,NM_031371,NM_003193	chr1,chr1,chr1	+,-,+	TBCE,ARID4B,TBCE	-886,-40031,-886
chr22:21994936-21996072	chr22	+	21995114	21995976	True	NM_152612,NM_001017964,NM_022044	chr22,chr22,chr22	+,-,+	CCDC116,YDJC,SDF2L1	-8079,-10774,565
chr1:2937276-2938114	chr1	+	2937294	2938032	True	NM_080431,NR_015440	chr1,chr1	+,-	ACTRT2,FLJ42875	13,46307
chr19:54693954-54694442	chr19	+	54694191	54694489	True	NM_001146056,NM_001146082,NM_001146083,NM_024075,NM_024298,NM_001077446	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,+,-,+	MBOAT7,MBOAT7,MBOAT7,TSEN34,MBOAT7,TSEN34	-458,-458,-458,-123,-458,614
chr11:119214725-119215254	chr11	+	119214773	119215195	True	NM_015645,NM_032015,NM_031433	chr11,chr11,chr11	-,+,-	C1QTNF5,RNF26,MFRP	2238,-9589,2238
chr20:25229389-25230576	chr20	+	25229653	25230401	True	NR_027091,NM_002862	chr20,chr20	-,+	LOC284798,PYGB	-100227,-1005
chr1:21995005-21995517	chr1	+	21995081	21995403	True	NM_002885,NM_001145657,NM_001013693	chr1,chr1,chr1	-,-,+	RAP1GAP,RAP1GAP,LDLRAD2	503,503,143354
chr16:48273526-48275112	chr16	+	48274750	48274847	True	NM_032583,NM_033151,NM_145186,NM_031490	chr16,chr16,chr16,chr16	-,-,-,+	ABCC11,ABCC11,ABCC11,LONP2	-5662,-8568,-5662,3363
chr10:126105555-126105944	chr10	+	126105559	126105705	True	NM_000274,NM_001171814,NM_001167880	chr10,chr10,chr10	-,-,+	OAT,OAT,LHPP	1898,1898,44635
chr22:41777502-41777769	chr22	+	41777629	41777809	True	NM_003216,NM_016272	chr22,chr22	+,-	TEF,TOB2	153,65268
chr19:52033972-52034504	chr19	+	52034408	52034512	True	NM_001177547,NM_198845,NM_198846,NM_001177549,NM_001177548,NM_007147,NM_001245	chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,+,-	SIGLEC6,SIGLEC6,SIGLEC6,SIGLEC6,SIGLEC6,ZNF175,SIGLEC6	648,648,648,648,648,40018,648
chr19:35225502-35226407	chr19	+	35225672	35226370	True	NM_001029997,NM_001007248,NM_001145665	chr19,chr19,chr19	+,-,+	ZNF181,ZNF599,ZNF181	-243,37828,-243
chr11:62561395-62561811	chr11	+	62561650	62561860	True	NM_199337,NM_001080501	chr11,chr11	+,-	TMEM179B,TMEM223	-6829,-2164
chr11:3651908-3652264	chr11	+	3651927	3652014	True	NM_053017,NR_002720	chr11,chr11	-,+	ART5,TRPC2	11530,-4278
chr1:185763778-185764816	chr1	+	185764116	185764855	True	NM_006469,NM_031935	chr1,chr1	-,+	IVNS1ABP,HMCN1	-477655,-60484
chr2:219437216-219437425	chr2	+	219437368	219437445	True	NM_020935,NM_005444	chr2,chr2	-,+	USP37,RQCD1	-4284,-3751
chrX:44733012-44733275	chrX	+	44733103	44733241	True	NM_176819,NM_021140	chrX,chrX	-,+	CXorf36,KDM6A	326955,-731
chr2:61109529-61110135	chr2	+	61109829	61110099	True	NM_002908,NR_033980	chr2,chr2	+,-	REL,FLJ16341	-1136,-1380
chr5:146609141-146610313	chr5	+	146609162	146610347	True	NM_181678,NM_145001,NM_001112724	chr5,chr5,chr5	-,+,+	PPP2R2B,STK32A,STK32A	-148129,4231,4231
chr11:2907602-2907928	chr11	+	2907640	2907860	True	NM_183233,NM_000076,NM_001122631,NM_001122630	chr11,chr11,chr11,chr11	+,-,-,-	SLC22A18,CDKN1C,CDKN1C,CDKN1C	13090,-645,-645,-645
chr16:89884910-89885255	chr16	+	89884910	89885141	True	NM_032451,NM_000135,NM_001018112	chr16,chr16,chr16	+,-,-	SPIRE2,FANCA,FANCA	9765,-1845,-1845
chr4:87928588-87928847	chr4	+	87928677	87928893	True	NM_144645,NM_005935	chr4,chr4	-,+	C4orf36,AFF1	-115102,-575
chr6:11111271-11112001	chr6	+	11111331	11111955	True	NM_001135575,NM_207582	chr6,chr6	+,-	LOC221710,ERVFRDE1	-17116,166
chr17:42924775-42926302	chr17	+	42924851	42925755	True	NM_016438,NM_001080383	chr17,chr17	+,-	HIGD1B,GJC1	216,-16672
chr11:57150715-57151401	chr11	+	57150956	57151252	True	NM_002728,NM_006093,NM_002559	chr11,chr11,chr11	-,-,+	PRG2,PRG3,P2RX3	6928,-2333,-45058
chr4:178688292-178689240	chr4	+	178688463	178689255	True	NR_033655,NR_028342	chr4,chr4	-,+	AGA,LOC285501	-324806,-38603
chr19:42579501-42580115	chr19	+	42579531	42580157	True	NM_022752,NM_002088	chr19,chr19	+,-	ZNF574,GRIK5	132,-9574
chr14:42076204-42076642	chr14	+	42076296	42076684	True	NM_152447,NM_203301	chr14,chr14	+,-	LRFN5,FBXO33	79,-2174592
chr19:39262140-39262533	chr19	+	39262152	39262508	True	NM_002307,NM_001042507	chr19,chr19	-,+	LGALS7,LGALS7B	1699,17341
chr19:39262140-39262533	chr19	-	39281490	39281846	False	NM_002307,NM_001042507	chr19,chr19	-,+	LGALS7,LGALS7B	-17333,-1691
chr6:6620784-6621218	chr6	+	6620795	6621134	True	NM_004271,NR_026970	chr6,chr6	+,-	LY86,LY86-AS1	-31912,1976
chrX:152992644-152992965	chrX	+	152992831	152993009	True	NM_001139441,NM_001139457,NM_000033,NM_005745,NR_024450	chrX,chrX,chrX,chrX,chrX	-,-,+,-,-	BCAP31,BCAP31,ABCD1,BCAP31,BCAP31	-3249,-3282,-2559,-2993,-2630
chr6:43424990-43425266	chr6	+	43424990	43425062	True	NM_023932,NM_206539,NM_001146016	chr6,chr6,chr6	-,-,+	DLK2,DLK2,TJAP1	-1704,-1204,20198
chr12:6234255-6234881	chr12	+	6234302	6234876	True	NM_001769,NM_000552	chr12,chr12	+,-	CD9,VWF	74605,-466
chr14:75345009-75345595	chr14	+	75345228	75345506	True	NR_033814,NM_001080408,NM_001933	chr14,chr14,chr14	+,-,+	DLST,PROX2,DLST	3087,-14691,3087
chr5:135855739-135856642	chr5	+	135855779	135856422	True	NM_020389,NM_001001419	chr5,chr5	-,+	TRPC7,SMAD5	-154615,-387294
chr17:7138980-7139768	chr17	+	7139035	7139729	True	NM_001033859,NM_203415,NM_024297,NM_007278,NM_004422	chr17,chr17,chr17,chr17,chr17	+,+,-,-,-	ACADVL,C17orf81,PHF23,GABARAP,DVL2	-15933,15642,3146,6074,-1172
chr22:50698775-50699132	chr22	+	50698882	50699172	True	NM_032019,NM_031454,NM_002969,NM_002751,NM_001159286	chr22,chr22,chr22,chr22,chr22	-,+,-,-,-	HDAC10,SELO,MAPK12,MAPK11,HDAC10	-9048,-59525,967,9657,-9048
chr17:42442088-42443293	chr17	+	42442484	42443158	True	NM_198475,NM_002087	chr17,chr17	-,+	FAM171A2,GRN	-1249,-20044
chr14:51132314-51133888	chr14	+	51132540	51133829	True	NM_021818,NM_181598	chr14,chr14	-,+	SAV1,ATL1	1255,-105862
chr2:23616729-23616973	chr2	+	23616788	23616990	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	532994,-8541
chr12:113588327-113589034	chr12	+	113588521	113589018	True	NM_004658,NM_001144872	chr12,chr12	-,+	RASAL1,CCDC42B	-14477,-909
chr11:60467738-60468357	chr11	+	60468205	60468383	True	NM_004778,NM_031457	chr11,chr11	-,+	GPR44,MS4A8B	155111,-1221
chr2:95890126-95891315	chr2	+	95890571	95891328	True	NM_032788,NM_001165977	chr2,chr2	-,+	ZNF514,PROM2	-65308,48872
chrX:40121909-40122414	chrX	+	40122011	40122429	True	NM_001123384,NM_005765	chrX,chrX	-,+	BCOR,ATP6AP2	-85429,317786
chrX:123093557-123093980	chrX	+	123093562	123093837	True	NM_001042751,NM_001042750,NM_006603,NM_001081550,NM_001042749	chrX,chrX,chrX,chrX,chrX	+,+,+,-,+	STAG2,STAG2,STAG2,THOC2,STAG2	1718,1718,1718,-226658,637
chr14:34954055-34955901	chr14	+	34954152	34955777	True	NR_002937,NM_138288	chr14,chr14	+,-	C14orf19,C14orf147	453350,-22684
chr19:11093561-11094176	chr19	+	11093650	11094109	True	NM_001128846,NM_001128847,NM_024029,NM_001128845,NM_001128848	chr19,chr19,chr19,chr19,chr19	+,+,-,+,+	SMARCA4,SMARCA4,YIPF2,SMARCA4,SMARCA4	718,718,-54293,718,718
chr17:7910772-7911687	chr17	+	7910779	7911605	True	NM_000180,NR_030697	chr17,chr17	+,-	GUCY2D,TRAPPC1	-4842,-75462
chr12:129337463-129337947	chr12	+	129337466	129337894	True	NM_145648,NM_144669	chr12,chr12	-,+	SLC15A4,GLT1D1	-28925,186
chr3:40564388-40564975	chr3	+	40564397	40564958	True	NR_033965,NM_001098414,NM_198484	chr3,chr3,chr3	-,+,+	FLJ33065,ZNF621,ZNF621	-213208,1417,1417
chr20:33735835-33736175	chr20	+	33735927	33736166	True	NM_018217,NM_006404,NR_026728,NM_001145025	chr20,chr20,chr20,chr20	-,+,-,-	EDEM2,PROCR,EDEM2,EDEM2	-766,23607,-766,-766
chr16:2519755-2520354	chr16	+	2519765	2520265	True	NM_001199107,NM_006181,NM_020705,NM_001048212,NM_025108	chr16,chr16,chr16,chr16,chr16	+,+,+,-,+	TBC1D24,NTN3,TBC1D24,CEMP1,C16orf59	4881,1234,4881,61194,-9701
chr12:6742872-6743262	chr12	+	6742969	6743145	True	NM_001164094,NM_001142961,NM_020400	chr12,chr12,chr12	+,-,-	COPS7A,LPAR5,LPAR5	90004,-2154,2202
chr19:21510051-21511410	chr19	+	21510451	21511463	True	NR_027130,NM_021269	chr19,chr19	+,-	ZNF738,ZNF708	30271,803
chr8:101661271-101661633	chr8	+	101661282	101661592	True	NR_033962,NM_152628	chr8,chr8	+,-	FLJ42969,SNX31	402689,351
chr13:113301391-113301903	chr13	+	113301446	113301922	True	NM_207440,NM_006322	chr13,chr13	+,-	C13orf35,TUBGCP3	-139,-58965
chr9:96718356-96719102	chr9	+	96718375	96718801	True	NM_177995,NM_021570	chr9,chr9	+,-	PTPDC1,BARX1	74274,-767
chr11:9482766-9483042	chr11	+	9482780	9483002	True	NM_003442,NR_036539	chr11,chr11	+,-	ZNF143,LOC644656	-319,-535
chr3:125653612-125654189	chr3	+	125653685	125654230	True	NM_001015050,NR_024251,NM_001195223	chr3,chr3,chr3	-,+,-	ALG1L,LOC100125556,ALG1L	1707,-18292,1707
chr3:125653612-125654189	chr3	-	123736604	123736654	False	NR_028136,NM_017578	chr3,chr3	+,-	KALRN,ROPN1	76903,-26405
chr17:76019910-76020606	chr17	+	76020264	76020396	True	NM_018996,NM_001127198	chr17,chr17	+,-	TNRC6C,TMC6	-20007,104523
chr16:70208980-70209241	chr16	+	70209006	70209250	True	NR_033959,NM_173619	chr16,chr16	-,+	LOC729513,CLEC18C	50736,-1129
chr16:70208980-70209241	chr16	+	69986094	69986300	False	NM_001136214,NR_003610,NM_182619	chr16,chr16,chr16	+,-,+	CLEC18A,PDXDC2P,CLEC18A	-1519,113601,-1335
chr16:70208980-70209241	chr16	-	74454089	74454333	False	NM_001011880,NM_002811	chr16,chr16	-,+	CLEC18B,PSMD7	1085,-123467
chr2:165961073-165961931	chr2	+	165961268	165961962	True	NM_001040142,NM_001081676	chr2,chr2	+,-	SCN2A,SCN3A	133949,98665
chr1:205786730-205787281	chr1	+	205786924	205787320	True	NM_173854,NM_181644	chr1,chr1	-,+	SLC41A1,MFSD4	-4763,-248870
chr16:90014830-90015069	chr16	+	90014974	90015048	True	NM_207514,NM_017702,NM_145039	chr16,chr16,chr16	+,+,-	DEF8,DEF8,CENPBD1	134,102,24242
chr7:139209509-139210311	chr7	+	139209594	139210354	True	NM_001080511,NM_198508	chr7,chr7	+,-	CLEC2L,KLRG2	-971,-41137
chr16:23466991-23467686	chr16	+	23467095	23467519	True	NM_019116,NM_153603	chr16,chr16	+,-	UBFD1,COG7	101342,-2583
chr22:36900917-36901479	chr22	+	36901103	36901525	True	NM_001102371,NM_024955,NM_145343	chr22,chr22,chr22	-,-,+	FOXRED2,FOXRED2,APOL1	1673,1615,-252037
chr19:52198762-52199231	chr19	+	52198837	52199227	True	NM_001523,NR_029843,NR_029693,NR_024330,NR_029482	chr19,chr19,chr19,chr19,chr19	-,+,+,+,+	HAS1,MIR99B,MIR125A,NCRNA00085,MIRLET7E	28044,-3023,-2381,-2295,-2849
chr5:65015274-65017246	chr5	+	65015552	65017238	True	NM_020726,NM_019072	chr5,chr5	+,-	NLN,SGTB	784,753
chr17:26973690-26973989	chr17	+	26973690	26973947	True	NM_014680,NM_003170	chr17,chr17	-,+	KIAA0100,SUPT6H	-1517,15354
chr14:102555551-102555985	chr14	+	102555736	102555982	True	NM_181302,NM_005348	chr14,chr14	+,-	WDR20,HSP90AA1	50229,-2224
chr2:234652526-234652811	chr2	+	234652541	234652743	True	NM_019093,NM_001001394	chr2,chr2	+,-	UGT1A3,DNAJB3	-14819,-24
chr3:47206240-47206704	chr3	+	47206451	47206658	True	NR_033373,NM_014159	chr3,chr3	+,-	FLJ39534,SETD2	-648,-984
chr10:134152507-134152921	chr10	+	134152756	134152950	True	NR_026559,NM_030626,NM_173575,NM_001143757,NM_001143759,NM_001143758	chr10,chr10,chr10,chr10,chr10,chr10	+,+,-,+,+,+	LRRC27,LRRC27,STK32C,LRRC27,LRRC27,LRRC27	-2196,-7193,-31279,-7066,-7193,-7193
chr22:19417779-19418193	chr22	+	19417782	19418032	True	NM_003776,NM_003325	chr22,chr22	+,-	MRPL40,HIRA	2003,1237
chr17:79904446-79905234	chr17	+	79904922	79905272	True	NR_015454,NM_153824,NM_001145113,NM_006907	chr17,chr17,chr17,chr17	+,-,-,-	LOC92659,PYCR1,MYADML2,PYCR1	-19274,-9954,-11,-9954
chr3:182815002-182815874	chr3	+	182815047	182815647	True	NM_020166,NM_032047	chr3,chr3	-,+	MCCC1,B3GNT5	1768,155384
chr19:9250956-9251531	chr19	+	9251023	9251513	True	NM_001190791,NM_020933,NM_001001958	chr19,chr19,chr19	+,+,-	ZNF317,ZNF317,OR7G3	-18,-18,-13397
chrX:101105560-101106624	chrX	+	101105601	101106630	True	NM_032946,NR_028089,NM_177948	chrX,chrX,chrX	-,-,+	NXF5,NXF5,ARMCX3	5976,5976,-227301
chr16:56672324-56672527	chr16	+	56672395	56672467	True	NR_003658,NR_036677,NM_176870,NM_005946,NM_005950,NR_027781	chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,-,+	MT1DP,MT1JP,MT1M,MT1A,MT1G,MT1DP	5248,-2795,-5912,110,29560,5131
chrX:51070685-51071998	chrX	+	51070992	51071974	True	NM_018159,NM_153183	chrX,chrX	-,+	NUDT11,NUDT10	167535,3108
chr4:110835174-110837002	chr4	+	110835284	110837025	True	NM_001178131,NM_001178130,NM_001963,NM_000204	chr4,chr4,chr4,chr4	+,+,+,-	EGF,EGF,EGF,CFI	-1295,-1295,-1295,-111949
chr3:184870961-184871192	chr3	+	184870962	184871228	True	NM_004721,NM_001025266	chr3,chr3	+,-	MAP3K13,C3orf70	209741,-160
chr20:57090386-57090700	chr20	+	57090428	57090730	True	NM_153360,NR_034147	chr20,chr20	-,+	APCDD1L,LOC149773	-479,-44
chr4:110221895-110222218	chr4	+	110221981	110222243	True	NM_032518,NM_198721,NM_001042734	chr4,chr4,chr4	-,-,+	COL25A1,COL25A1,SEC24B	1606,1606,132727
chr19:18680563-18681412	chr19	+	18680852	18680938	True	NM_012181,NM_001033930,NM_003333	chr19,chr19,chr19	-,+,+	FKBP8,UBA52,UBA52	-26469,1675,1675
chr11:67416097-67416378	chr11	+	67416145	67416345	True	NM_007103,NM_080658,NM_005995	chr11,chr11,chr11	+,-,-	NDUFV1,ACY3,TBX10	-41873,1835,-9114
chr1:156252052-156252311	chr1	+	156252076	156252254	True	NR_026678,NM_015327,NM_032323	chr1,chr1,chr1	+,-,+	TMEM79,SMG5,TMEM79	449,416,1815
chr20:33997195-33998430	chr20	+	33997406	33998060	True	NM_018244,NM_199487,NM_007186,NM_001184977	chr20,chr20,chr20,chr20	-,-,+,-	UQCC,UQCC,CEP250,UQCC	1935,1935,45162,1935
chr8:95229903-95230474	chr8	+	95229948	95230506	True	NM_001161778,NM_004063,NM_001144663	chr8,chr8,chr8	+,-,-	PDP1,CDH17,CDH17	-300015,-9133,-417
chr6:27213483-27215459	chr6	+	27213582	27215481	True	NM_005865,NM_033482	chr6,chr6	+,-	PRSS16,POM121L2	20,64580
chr2:228581161-228581877	chr2	+	228581356	228581712	True	NM_001130046,NM_025243	chr2,chr2	+,-	CCL20,SLC19A3	96845,1095
chr7:148129548-148130065	chr7	+	148129745	148130102	True	NM_145304,NM_001203249	chr7,chr7	+,-	C7orf33,EZH2	157554,450552
chr2:110362225-110362969	chr2	+	110362317	110362787	True	NM_023016,NM_178584,NM_144710	chr2,chr2,chr2	+,-,-	ANKRD57,SEPT10,SEPT10	9123,9058,9058
chr17:73974467-73974929	chr17	+	73974501	73974779	True	NM_007292,NM_001185039,NM_001113324,NR_037709,NM_004035	chr17,chr17,chr17,chr17,chr17	-,-,+,+,-	ACOX1,ACOX1,C17orf106,C17orf106-CDK3,ACOX1	786,786,518,518,786
chr5:176427901-176428765	chr5	+	176428036	176428564	True	NM_001199297,NM_012279,NM_016290,NM_001199298	chr5,chr5,chr5,chr5	-,+,-,-	UIMC1,ZNF346,UIMC1,UIMC1	5273,21132,4936,5288
chr17:25676825-25677025	chr17	+	25676926	25677014	True	NM_000625,NM_134265	chr17,chr17	-,+	NOS2,WSB1	450591,-55878
chr17:41158368-41159283	chr17	+	41158527	41159283	True	NM_006373,NM_000988,NM_005533	chr17,chr17,chr17	-,+,+	VAT1,RPL27,IFI35	15226,-8145,122
chr1:1309781-1310000	chr1	+	1309821	1309915	True	NM_001127230,NM_001127229,NM_017900,NR_015434	chr1,chr1,chr1,chr1	-,-,-,+	AURKAIP1,AURKAIP1,AURKAIP1,LOC148413	697,715,953,24994
chr16:66879018-66879805	chr16	+	66879095	66879842	True	NM_001014435,NM_005182,NM_003905	chr16,chr16,chr16	+,+,-	CA7,CA7,NAE1	-305,-864,-14216
chr21:44394596-44394843	chr21	+	44394617	44394795	True	NM_004571,NM_018669	chr21,chr21	+,-	PKNOX1,WDR4	-25,-94939
chr16:3560287-3560560	chr16	+	3560434	3560556	True	NM_015041,NM_024793,NM_001080524	chr16,chr16,chr16	+,+,-	CLUAP1,CLUAP1,C16orf90	-9522,-591,-15013
chr5:34007656-34007867	chr5	+	34007660	34007754	True	NM_001167598,NM_001167595,NM_001167597,NM_001167596,NM_014324,NM_016568,NM_203382	chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,-,+,-	AMACR,AMACR,AMACR,AMACR,AMACR,RXFP3,AMACR	516,516,516,516,516,-71220,516
chr22:42093358-42095212	chr22	+	42093566	42094924	True	NM_001003796,NM_001142964,NM_152513	chr22,chr22,chr22	-,+,+	NHP2L1,C22orf46,MEI1	-8653,-7070,593
chr12:49490873-49491491	chr12	+	49490877	49491395	True	NM_021044,NM_005430	chr12,chr12	-,+	DHH,WNT1	-2275,-118692
chr17:47789362-47789964	chr17	+	47789554	47789860	True	NM_005827,NM_001199155	chr17,chr17	-,+	SLC35B1,MYST2	-4272,76120
chr19:16047860-16048415	chr19	+	16048065	16048406	True	NM_001004465,NM_021187,NM_001128932	chr19,chr19,chr19	+,-,-	OR10H4,CYP4F11,CYP4F11	11411,-2389,-2389
chr17:16551408-16553209	chr17	+	16551775	16553185	True	NM_020787,NM_014695	chr17,chr17	-,+	ZNF624,CCDC144A	4032,40453
chr6:134274771-134275060	chr6	+	134274855	134275083	True	NM_004865,NM_145176	chr6,chr6	+,-	TBPL1,SLC2A12	-606,98756
chr15:52822437-52823365	chr15	+	52822559	52823406	True	NM_001142495,NM_002748,NM_000259	chr15,chr15,chr15	-,+,-	MYO5A,MAPK6,MYO5A	-1312,-511199,-1312
chr14:92413734-92414001	chr14	+	92413756	92413948	True	NM_006329,NM_017437	chr14,chr14	-,+	FBLN5,CPSF2	148,174349
chr10:44881599-44881871	chr10	+	44881812	44881914	True	NM_001178134,NM_000609,NM_199168,NR_033846,NM_001033886	chr10,chr10,chr10,chr10,chr10	-,-,-,+,-	CXCL12,CXCL12,CXCL12,LOC283033,CXCL12	-1267,-1267,-1267,-477111,-1267
chr10:29106369-29106828	chr10	+	29106488	29106877	True	NR_033805,NM_012342	chr10,chr10	-,+	LOC220906,BAMBI	-285205,-140120
chr8:37338897-37340766	chr8	+	37339045	37340387	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	212913,265240
chr11:48005092-48006404	chr11	+	48005135	48005894	True	NM_002843,NM_015231,NM_001098503	chr11,chr11,chr11	+,-,+	PTPRJ,NUP160,PTPRJ	-3076,-135078,-3076
chr21:45877323-45877558	chr21	+	45877334	45877584	True	NM_198691,NM_030891	chr21,chr21	-,+	KRTAP10-1,LRRC3	82544,-1992
chr6:74067282-74067709	chr6	+	74067408	74067740	True	NM_001017361,NM_001025290	chr6,chr6	+,-	C6orf221,DPPA5	4659,-3409
chr12:27933826-27934144	chr12	+	27933916	27934090	True	NM_001146221,NM_020782	chr12,chr12	-,+	LOC100287284,KLHDC5	-9707,-780
chr5:130972060-130973025	chr5	+	130972140	130972832	True	NM_001164389,NM_001164388,NM_016340,NM_001164390,NM_001164386,NM_001164387,NM_020240	chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,-,-,+	RAPGEF6,RAPGEF6,RAPGEF6,RAPGEF6,RAPGEF6,RAPGEF6,CDC42SE2	-1211,-1211,-1211,-1211,-1211,-1211,-372498
chr12:50671126-50671779	chr12	+	50671129	50671562	True	NM_016357,NM_001170804,NM_001113546	chr12,chr12,chr12	-,+,-	LIMA1,LARP4,LIMA1	5848,123029,5848
chr13:67948117-67949819	chr13	+	67948147	67949578	True	NR_002717,NM_203487	chr13,chr13	+,-	ATXN8OS,PCDH9	2731766,-143679
chr11:108552029-108552772	chr11	+	108552083	108552783	True	NM_015065,NM_004398	chr11,chr11	-,+	EXPH5,DDX10	-87709,-16329
chr11:107797885-107798124	chr11	+	107797924	107798125	True	NM_017515,NM_017516	chr11,chr11	-,+	SLC35F2,RAB39	-68010,1151
chr5:133987770-133988241	chr5	+	133987899	133987986	True	NM_021982,NM_016103	chr5,chr5	+,-	SEC24A,SAR1B	-3475,-19366
chr11:59436848-59437098	chr11	+	59436961	59437145	True	NM_152716,NM_001178040	chr11,chr11	-,+	PATL1,STX3	-450,85386
chr6:44190975-44191226	chr6	+	44190976	44191160	True	NM_004955,NM_178148,NM_001078174,NM_001078175,NM_001078176,NM_001078177	chr6,chr6,chr6,chr6,chr6,chr6	+,-,+,+,+,+	SLC29A1,SLC35B2,SLC29A1,SLC29A1,SLC29A1,SLC29A1	-3785,34173,-3785,135,135,202
chr14:99947696-99947921	chr14	+	99947745	99947967	True	NM_032233,NM_001099402,NM_199123	chr14,chr14,chr14	-,+,-	SETD3,CCNK,SETD3	-519,-57,-519
chr1:14025777-14026508	chr1	+	14025805	14026493	True	NM_015866,NM_001135610,NM_012231,NM_001010847	chr1,chr1,chr1,chr1	+,+,+,-	PRDM2,PRDM2,PRDM2,LRRC38	4856,241,4856,-185563
chr13:32890381-32890994	chr13	+	32890398	32890873	True	NM_000059,NM_001136571	chr13,chr13	+,-	BRCA2,ZAR1L	-832,-4307
chr5:180467801-180469012	chr5	+	180467917	180469028	True	NM_152547,NM_203297	chr5,chr5	+,-	BTNL9,TRIM7	-752,158953
chr12:12235305-12236057	chr12	+	12235341	12235828	True	NM_138722,NM_002336	chr12,chr12	+,-	BCL2L14,LRP6	-10990,184033
chr21:47647965-47648250	chr21	+	47647977	47648061	True	NR_002776,NM_002340,NM_001145436,NM_001001438,NM_001145437	chr21,chr21,chr21,chr21,chr21	+,-,-,-,-	MCM3AP-AS1,LSS,LSS,LSS,LSS	1096,735,735,735,735
chr12:131359738-131360447	chr12	+	131360050	131360439	True	NM_194356,NM_006325	chr12,chr12	-,+	STX2,RAN	-36239,-3495
chr1:193092516-193094429	chr1	+	193092809	193094351	True	NM_024529,NM_016066	chr1,chr1	+,-	CDC73,GLRX2	-1779,-17565
chr19:54746848-54747397	chr19	+	54747123	54747317	True	NM_001013,NM_024318	chr19,chr19	+,-	RPS9,LILRA6	-42448,-399
chr19:54746848-54747397	chr19	+	54727371	54727565	False	NM_001013,NM_001081450,NM_006864	chr19,chr19,chr19	+,-,-	RPS9,LILRB3,LILRB3	-22696,-412,-412
chr1:84843796-84845192	chr1	+	84843842	84845073	True	NM_021233,NR_003927	chr1,chr1	+,-	DNASE2B,UOX	19141,18560
chr5:138740825-138741225	chr5	+	138741038	138741207	True	NM_001033112,NM_194296	chr5,chr5	+,-	PAIP2,SPATA24	-62955,-1262
chr4:152096154-152096563	chr4	+	152096154	152096550	True	NR_000007,NM_001128924	chr4,chr4	+,-	SNORD73A,SH3D19	-71226,204
chr21:27597109-27598572	chr21	+	27597224	27598447	True	NM_002040,NM_001136131	chr21,chr21	+,-	GABPA,APP	-489952,-53778
chr15:81065581-81067061	chr15	+	81065583	81067015	True	NM_018689,NR_030393	chr15,chr15	+,-	KIAA1199,MIR549	4696,67452
chr16:19731087-19732810	chr16	+	19731444	19732827	True	NM_153208,NM_001012991	chr16,chr16	+,-	IQCK,C16orf88	-3718,-1952
chr17:46690861-46691109	chr17	+	46690928	46691158	True	NM_024016,NM_004502,NM_018952,NR_033205	chr17,chr17,chr17,chr17	-,-,-,+	HOXB8,HOXB7,HOXB6,LOC404266	1193,-2545,-8594,-17659
chr5:134368849-134369360	chr5	+	134369058	134369276	True	NM_002653,NM_178019	chr5,chr5	-,+	PITX1,CATSPER3	738,-65513
chr1:42801367-42802380	chr1	+	42801489	42801991	True	NM_001198852,NM_001198850,NM_001198851,NM_014947,NM_173642	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	FOXJ3,FOXJ3,FOXJ3,FOXJ3,RIMKLA	-603,9,-853,-586,44476
chr20:33734528-33734902	chr20	+	33734633	33734925	True	NM_018217,NM_006404,NR_026728,NM_001145025	chr20,chr20,chr20,chr20	-,+,-,-	EDEM2,PROCR,EDEM2,EDEM2	286,24848,286,286
chr19:51877778-51879086	chr19	+	51877899	51878918	True	NM_001985,NM_152353,NR_033235,NM_005601	chr19,chr19,chr19,chr19	-,-,+,-	ETFB,CLDND2,LOC100129083,NKG7	-8227,-5642,40241,-1939
chr20:5941485-5943059	chr20	+	5941694	5942938	True	NM_015939,NM_182802	chr20,chr20	-,+	TRMT6,MCM8	-10521,-10449
chr10:18040476-18040990	chr10	+	18040546	18041033	True	NM_014241,NM_001098844	chr10,chr10	-,+	PTPLA,FAM23A	-381173,184
chr10:18040476-18040990	chr10	+	17793579	17794066	False	NM_014241,NM_001098844	chr10,chr10	-,+	PTPLA,FAM23A	-134206,184
chr10:95454507-95455800	chr10	+	95454537	95455840	True	NM_005097,NM_145246	chr10,chr10	+,-	LGI1,FRA10AC1	61725,6540
chr2:223555248-223555488	chr2	+	223555302	223555506	True	NM_058165,NM_005687	chr2,chr2	+,-	MOGAT1,FARSB	-18906,-34475
chr12:13350631-13352270	chr12	+	13350979	13352066	True	NM_001080555,NM_001423	chr12,chr12	-,+	GSG1,EMP1	-94360,-1437
chr9:97486442-97486892	chr9	+	97486475	97486629	True	NM_001127628,NM_032823,NM_001193331	chr9,chr9,chr9	-,+,+	FBP1,C9orf3,C9orf3	-83944,2321,2321
chr1:201081684-201083286	chr1	+	201081860	201083147	True	NM_000069,NM_001164586	chr1,chr1	-,+	CACNA1S,IGFN1	-166,76805
chr10:98601276-98601650	chr10	+	98601408	98601704	True	NM_032440,NM_001170766,NM_152309,NM_001170765	chr10,chr10,chr10,chr10	+,+,-,+	LCOR,LCOR,PIK3AP1,LCOR	-8753,-9448,-121129,-9448
chr1:110990627-110991095	chr1	+	110990650	110991144	True	NM_032414,NM_006402	chr1,chr1	+,-	PROK1,HBXIP	2643,-40104
chrX:133679665-133680287	chrX	+	133679697	133680251	True	NR_029962,NR_029946,NR_024607,NR_030399,NM_000194,NR_030227,NR_030587,NR_030228	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,+,-,-,-	MIR450A1,MIR424,MGC16121,MIR542,HPRT1,MIR450A2,MIR450B,MIR503	-5236,540,459,-4230,-85573,-5060,-5405,227
chr2:228237324-228237727	chr2	+	228237716	228237776	True	NM_020194,NM_024795	chr2,chr2	+,-	MFF,TM4SF20	-45539,6296
chr14:77871055-77871660	chr14	+	77871092	77871445	True	NM_001010860,NM_138791	chr14,chr14	+,-	SAMD15,C14orf148	-27389,17844
chr16:55357181-55357533	chr16	+	55357187	55357401	True	NR_034105,NM_024335	chr16,chr16	-,+	CRNDE,IRX6	-394108,1069
chr10:25463559-25463759	chr10	+	25463567	25463807	True	NM_020752,NR_027333	chr10,chr10	+,-	GPR158,LOC100128811	482,1448
chr1:60392282-60392565	chr1	+	60392288	60392594	True	NM_000775,NM_015888	chr1,chr1	-,+	CYP2J2,HOOK1	33,-111806
chr3:194407132-194407459	chr3	+	194407184	194407460	True	NM_018385,NM_153690	chr3,chr3	-,+	LSG1,FAM43A	-13978,-614
chr17:21455018-21456236	chr17	+	21455058	21456211	True	NM_001113434,NM_001194958	chr17,chr17	-,+	C17orf51,KCNJ18	-117,-146661
chr1:116918806-116919070	chr1	+	116918910	116919072	True	NM_001160234,NM_000701,NM_001160233,NR_024126	chr1,chr1,chr1,chr1	+,+,+,-	ATP1A1,ATP1A1,ATP1A1,ATP1A1OS	6919,-3166,-2472,42159
chr5:140341263-140341753	chr5	+	140341263	140341809	True	NM_018899,NM_031883,NM_002109	chr5,chr5,chr5	+,+,-	PCDHAC2,PCDHAC2,HARS	3937,4542,-270292
chr8:133845717-133846198	chr8	+	133845727	133846247	True	NM_003235,NM_144649	chr8,chr8	+,-	TG,TMEM71	32957,-72813
chr6:26109061-26110059	chr6	+	26109179	26110114	True	NM_003542,NM_005323	chr6,chr6	+,-	HIST1H4C,HIST1H1T	-5054,-815
chr19:46479633-46480607	chr19	+	46479666	46480605	True	NM_002516,NM_001080402	chr19,chr19	-,+	NOVA2,CCDC61	-3009,17733
chr8:38034640-38035013	chr8	+	38034711	38035007	True	NM_001204878,NM_004874,NM_014462	chr8,chr8,chr8	+,+,-	BAG4,BAG4,LSM1	-657,-657,-685
chr2:47404019-47405103	chr2	+	47404214	47405134	True	NM_001743,NM_002354	chr2,chr2	-,+	CALM2,EPCAM	-474,191152
chr22:24383322-24384252	chr22	+	24383558	24384173	True	NM_001144931,NM_000853	chr22,chr22	+,-	LOC391322,GSTT1	-10492,161
chr20:44656116-44656947	chr20	+	44656119	44656698	True	NM_001134771,NM_022095,NM_020708	chr20,chr20,chr20	+,-,+	SLC12A5,ZNF335,SLC12A5	-5841,-55286,1122
chr19:926318-926586	chr19	+	926537	926599	True	NM_138774,NM_005224,NM_032551	chr19,chr19,chr19	-,+,+	C19orf22,ARID3A,KISS1R	-13312,-551,-9246
chr10:124555502-124557084	chr10	+	124555630	124556842	True	NM_022034,NR_003570	chr10,chr10	-,+	CUZD1,FLJ46361	48899,-39471
chr2:33954019-33955089	chr2	+	33954029	33955055	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-215142,-745
chr12:49351391-49352191	chr12	+	49351482	49352050	True	NM_001659,NM_005430	chr12,chr12	-,+	ARF3,WNT1	-230,20185
chr20:60963320-60963812	chr20	+	60963377	60963813	True	NM_001024,NM_031215	chr20,chr20	+,-	RPS21,CABLES2	-1307,18576
chr17:34121543-34121835	chr17	+	34121613	34121827	True	NM_001032278,NM_024302,NM_139215	chr17,chr17,chr17	-,-,+	MMP28,MMP28,TAF15	863,863,14660
chr20:18569131-18569714	chr20	+	18569228	18569695	True	NM_006606,NM_080820	chr20,chr20	-,+	RBBP9,DTD1	-91341,-723
chr6:8436271-8437852	chr6	+	8436315	8437662	True	NM_015948,NR_004855,NM_001142541,NM_001142540	chr6,chr6,chr6,chr6	-,+,-,-	SLC35B3,HULC,SLC35B3,SLC35B3	-521,214779,-521,-521
chr15:42063336-42064547	chr15	+	42063368	42064505	True	NR_036195,NM_014994,NM_001128608	chr15,chr15,chr15	-,+,+	MIR4310,MAPKBP1,MAPKBP1	94305,2126,2126
chrX:85595892-85597732	chrX	+	85595997	85597285	True	NM_001145414,NM_001139515	chrX,chrX	-,+	CHM,DACH2	-293431,-78077
chrY:26980322-26980563	chrY	+	26980321	26980563	True	NM_020364,NM_020420,NM_001005375,NM_001005786,NM_001005785	chrY,chrY,chrY,chrY,chrY	+,+,+,+,+	DAZ3,DAZ4,DAZ4,DAZ2,DAZ2	-405,-405,-405,-382,-382
chrY:26980322-26980563	chrY	-	26959042	26959284	False	NM_020364,NM_001005375,NM_020420	chrY,chrY,chrY	-,+,-	DAZ3,DAZ4,DAZ4	405,20682,405
chrY:26980322-26980563	chrY	-	25344657	25344899	False	NM_020364,NM_020420,NM_001005375,NM_004081	chrY,chrY,chrY,chrY	+,-,-,-	DAZ3,DAZ4,DAZ4,DAZ1	20681,405,405,390
chrY:26980322-26980563	chrY	+	25365935	25366177	False	NM_020364,NM_020420,NM_001005786,NM_001005785,NM_020363	chrY,chrY,chrY,chrY,chrY	+,+,+,+,+	DAZ3,DAZ4,DAZ2,DAZ2,DAZ2	-405,-405,-382,-382,-382
chr14:65566607-65568370	chr14	+	65566647	65568289	True	NM_002028,NM_197957,NM_145113,NM_145112,NM_145114,NM_145116,NM_002382	chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,-,-,-,-,-,-	FNTB,MAX,MAX,MAX,MAX,MAX,MAX	-113198,988,988,988,988,988,988
chr2:97522713-97523200	chr2	+	97522720	97523112	True	NM_016466,NM_199078	chr2,chr2	-,+	ANKRD39,CNNM3	694,-40780
chr1:156561969-156562213	chr1	+	156561976	156562038	True	NM_144772,NM_182679,NM_015590	chr1,chr1,chr1	+,-,-	APOA1BP,GPATCH4,GPATCH4	-469,9291,9291
chr15:22893940-22894857	chr15	+	22893983	22894495	True	NM_014608,NM_001008860	chr15,chr15	+,-	CYFIP1,NIPA2	-1350,139987
chr8:128805412-128805761	chr8	+	128805432	128805520	True	NR_003367,NR_024393,NR_031609	chr8,chr8,chr8	+,-,+	PVT1,LOC727677,MIR1204	1258,-311048,2687
chr15:65204091-65204308	chr15	+	65204125	65204331	True	NM_182703,NM_001127889	chr15,chr15	+,-	ANKDD1A,SPG21	-75,77531
chr10:43917810-43918291	chr10	+	43917947	43918047	True	NR_026693,NM_001098204	chr10,chr10	+,-	ZNF487P,HNRNPF	14526,-13251
chr4:9568647-9569054	chr4	+	9568690	9569010	True	NR_031688,NM_001040448	chr4,chr4	-,+	MIR548I2,DEFB131	-10753,-122482
chr1:179335023-179335311	chr1	+	179335107	179335231	True	NM_001136001,NM_144696	chr1,chr1	-,+	ABL2,AXDND1	-136288,-303
chr3:158449575-158449794	chr3	+	158449586	158449738	True	NM_206963,NM_002888,NM_001167903	chr3,chr3,chr3	-,-,+	RARRES1,RARRES1,MFSD1	587,587,69976
chr20:12357381-12359262	chr20	+	12357783	12359006	True	NM_017714,NM_014962	chr20,chr20	-,+	TASP1,BTBD3	1260628,-459278
chr8:55533965-55534225	chr8	+	55533997	55534223	True	NM_006269,NM_006330	chr8,chr8	+,-	RP1,LYPLA1	-5421,-519420
chr22:50688883-50689416	chr22	+	50688904	50689448	True	NM_032019,NM_031454,NM_020461,NM_001159286	chr22,chr22,chr22,chr22	-,+,-,-	HDAC10,SELO,TUBGCP6,HDAC10	436,-49547,-5504,436
chr17:27273538-27274160	chr17	+	27273540	27273895	True	NM_020889,NM_005702,NM_001033561	chr17,chr17,chr17	-,+,-	PHF12,ERAL1,PHF12	4666,-91548,4666
chr1:151146614-151147098	chr1	+	151146708	151147110	True	NM_013353,NR_037937,NM_001204856,NM_001136543,NM_024041,NM_212551	chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,-,+,-	TMOD4,SCNM1,SCNM1,LYSMD1,SCNM1,LYSMD1	1487,-8261,-8261,-8284,-8261,-8338
chrX:102339301-102340551	chrX	+	102339372	102340426	True	NM_001127688,NM_022052	chrX,chrX	+,-	BEX4,NXF3	129593,7646
chr19:41220499-41220896	chr19	+	41220612	41220691	True	NM_025194,NM_001142555,NM_024876	chr19,chr19,chr19	+,-,-	ITPKC,ADCK4,ADCK4	2316,373,2152
chrX:152734602-152734944	chrX	+	152734706	152734776	True	NM_017518,NM_001711	chrX,chrX	-,+	HAUS7,BGN	1885,25570
chr16:23159864-23160074	chr16	+	23159863	23160045	True	NM_001039,NM_020718	chr16,chr16	+,-	SCNN1G,USP31	33994,596
chr6:124146182-124147239	chr6	+	124146207	124147272	True	NM_153355,NM_006073	chr6,chr6	+,-	NKAIN2,TRDN	-21189,-188265
chr2:129074158-129074778	chr2	+	129074194	129074706	True	NM_004807,NR_027671	chr2,chr2	-,+	HS6ST1,UGGT1	1515,-225463
chr2:173422496-173422699	chr2	+	173422495	173422590	True	NR_026995,NM_002610	chr2,chr2	-,+	LOC91149,PDK1	178405,-1777
chr12:7242774-7243443	chr12	+	7242904	7243486	True	NR_026947,NM_001733	chr12,chr12	+,-	LOC283314,C1R	17417,1607
chr7:95023370-95025233	chr7	+	95023856	95025172	True	NM_145872,NM_000940	chr7,chr7	+,-	ASB4,PON3	90040,565
chr19:53970105-53970515	chr19	+	53970234	53970320	True	NR_002938,NM_001004301	chr19,chr19	-,+	LOC284379,ZNF813	136489,668
chr4:75719737-75720013	chr4	+	75719791	75720061	True	NM_001729,NM_015393	chr4,chr4	-,+	BTC,PARM1	27,138223
chr15:31129452-31130802	chr15	+	31129790	31130323	True	NM_017762,NM_001146095	chr15,chr15	-,+	MTMR10,FAN1	153537,65731
chr2:91935961-91936310	chr2	+	91936105	91936181	True	NR_003503,NR_027238	chr2,chr2	+,-	GGT8P,LOC654342	27186,-88130
chr11:33034445-33035288	chr11	+	33034447	33035329	True	NM_139160,NM_001077242,NM_001326	chr11,chr11,chr11	+,+,-	DEPDC7,DEPDC7,CSTF3	2398,2080,147758
chr3:53381374-53381709	chr3	+	53381428	53381758	True	NM_018403,NM_000720	chr3,chr3	-,+	DCP1A,CACNA1D	14,147272
chr12:49322903-49324631	chr12	+	49323315	49324596	True	NM_001143782,NM_001143781,NM_033124,NM_016594	chr12,chr12,chr12,chr12	-,-,+,-	FKBP11,FKBP11,CCDC65,FKBP11	-3985,-4651,-25473,-3985
chr3:118959904-118961020	chr3	+	118959948	118960702	True	NM_212543,NM_003778,NM_020754	chr3,chr3,chr3	-,-,+	B4GALT4,B4GALT4,ARHGAP31	-196,-196,52517
chr18:77867042-77867367	chr18	+	77867090	77867370	True	NM_014913,NM_006701	chr18,chr18	+,-	ADNP2,TXNL4A	-226,-118558
chr9:117159388-117159874	chr9	+	117159510	117159910	True	NM_030767,NM_000608	chr9,chr9	-,+	AKNA,ORM2	-2825,-67492
chr22:41762102-41762479	chr22	+	41762315	41762477	True	NM_001145398,NM_002883	chr22,chr22	+,-	TEF,RANGAP1	914,-80099
chr12:27866865-27867442	chr12	+	27867046	27867239	True	NM_021821,NM_001146221,NM_001190864	chr12,chr12,chr12	+,-,+	MRPS35,LOC100287284,MRPS35	-3396,57029,-3396
chr2:27581410-27581830	chr2	+	27581410	27581600	True	NM_001035521,NM_001521,NM_014748	chr2,chr2,chr2	-,-,+	GTF3C2,GTF3C2,SNX17	-1542,-1542,11788
chr7:56160764-56161010	chr7	+	56160804	56161056	True	NM_015411,NM_006213	chr7,chr7	+,-	SUMF2,PHKG1	-28938,-115
chr10:102667776-102668256	chr10	+	102667883	102668265	True	NM_001136123,NR_024245,NM_018121,NM_176792	chr10,chr10,chr10,chr10	+,+,+,-	FAM178A,FAM178A,FAM178A,MRPL43	4060,4060,4060,79057
chr2:127962560-127962929	chr2	+	127962586	127962915	True	NM_001001665,NM_000312	chr2,chr2	-,+	CYP27C1,PROC	485,213080
chr4:69216487-69217564	chr4_ctg9_hap1	+	46520	47158	False	NM_014058,NM_133370,NM_001031732	chr4_ctg9_hap1,chr4_ctg9_hap1,chr4_ctg9_hap1	+,-,-	TMPRSS11E,YTHDC1,YTHDC1	95930,-774,-774
chr4:69216487-69217564	chr4	+	69216598	69217236	True	NM_014058,NM_133370,NM_001031732	chr4,chr4,chr4	+,-,-	TMPRSS11E,YTHDC1,YTHDC1	95930,-774,-774
chr18:61450294-61450718	chr18	+	61450593	61450721	True	NM_003784,NM_006919	chr18,chr18	+,-	SERPINB7,SERPINB3	-8032,-121396
chr2:233733554-233734505	chr2	+	233733554	233734462	True	NM_001114090,NM_206895	chr2,chr2	-,+	NGEF,C2orf82	58449,531
chr22:30643607-30643814	chr22	+	30643713	30643861	True	NM_001017437,NM_002309	chr22,chr22	+,-	CCDC157,LIF	108765,-917
chr3:189389136-189390178	chr3	+	189389185	189390054	True	NM_003722,NM_018192	chr3,chr3	+,-	TP63,LEPREL1	-40026,448915
chr1:145714106-145714418	chr1	+	145714138	145714368	True	NM_001201325,NM_007053	chr1,chr1	+,-	PDZK1,CD160	13297,1247
chr3:169580077-169580403	chr3	+	169580077	169580277	True	NM_001080460,NM_024727	chr3,chr3	+,-	LRRIQ4,LRRC31	-40420,7433
chr1:146696396-146696867	chr1	+	146696416	146696904	True	NM_001144830,NM_001461,NM_004284,NM_001144829	chr1,chr1,chr1,chr1	-,-,+,-	FMO5,FMO5,CHD1L,FMO5	376,376,17386,376
chr10:70879428-70881424	chr10	+	70879590	70881061	True	NM_001057,NM_001035260,NM_004896	chr10,chr10,chr10	-,+,+	TACR2,VPS26A,VPS26A	295674,2846,2846
chr1:28832994-28833892	chr1	+	28833013	28833903	True	NR_002909,NR_030725,NR_030726,NR_036473,NM_001048199,NR_003077	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-	SNHG3,RCC1,RCC1,SNHG3,RCC1,SNORD99	-609,-609,-609,-609,-609,71481
chr1:36610781-36611533	chr1	+	36610925	36611313	True	NM_014408,NM_018067	chr1,chr1	-,+	TRAPPC3,MAP7D1	3804,10489
chr6:99374418-99374854	chr6	+	99374420	99374897	True	NM_005604,NM_012160	chr6,chr6	+,-	POU3F2,FBXL4	-91900,21003
chr11:47375343-47376517	chr11	+	47375579	47376331	True	NM_000256,NM_001128225	chr11,chr11	-,+	MYBPC3,SLC39A13	-1326,53714
chr15:89456820-89457630	chr15	+	89456823	89457393	True	NM_013227,NM_001114614,NM_005928	chr15,chr15,chr15	+,-,-	ACAN,MFGE8,MFGE8	-110200,-160,-160
chr21:44741236-44741863	chr21	+	44741275	44741801	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	128102,105251
chr17:34505148-34506118	chr17	+	34505198	34505768	True	NM_001001417,NM_001001435	chr17,chr17	-,+	TBC1D3B,CCL4L1	-1210,32699
chr17:34505148-34506118	chr17	-	36282186	36282756	False	NM_032258,NR_024178,NM_001123391	chr17,chr17,chr17	+,-,+	TBC1D3F,LOC284100,TBC1D3	1203,-37823,1203
chr17:34505148-34506118	chr17	+	34593242	34593812	False	NM_001001435,NM_001001418	chr17,chr17	+,-	CCL4L1,TBC1D3C	46221,-1215
chr17:34505148-34506118	chr17	+	34758257	34758821	False	NM_001123392,NM_004773	chr17,chr17	-,+	TBC1D3H,ZNHIT3	-1207,83651
chr17:34505148-34506118	chr17	+	34809306	34809876	False	NM_001001418,NM_004773,NM_001040282	chr17,chr17,chr17	-,+,-	TBC1D3C,ZNHIT3,TBC1D3G	-1215,32596,-1203
chrX:21866720-21867860	chrX	+	21867035	21867857	True	NM_015884,NM_014332,NM_206923	chrX,chrX,chrX	+,-,+	MBTPS2,SMPX,YY2	-9442,-90805,6247
chr12:124021328-124021900	chr12	+	124021574	124021778	True	NR_037470,NM_178314	chr12,chr12	+,-	MIR3908,RILPL1	-669,-3309
chr7:23341309-23342504	chr7	+	23341739	23342264	True	NM_138446,NM_006547	chr7,chr7	+,-	C7orf30,IGF2BP3	-2850,167781
chr1:161210554-161211656	chr1	+	161210706	161211489	True	NM_001077470,NM_001077471,NM_001077472,NM_001077473,NM_001077474,NM_001077475,NM_001077476,NM_001077477,NM_001077478,NM_001077479,NM_001077469,NM_001077481,NM_001077480,NM_001077482,NM_032174,NM_005122	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,-,-,-,-,-,-,-,-,-,+,-	NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,TOMM40L,NR1I3	-2706,-2706,-2706,-2706,-2706,-2706,-2706,-2706,-2706,-2706,-2706,-2706,-2706,-2706,-14924,-2706
chr14:36987586-36987788	chr14	+	36987737	36987827	True	NM_003317,NM_006194,NM_001101341,NM_001079668	chr14,chr14,chr14,chr14	-,+,-,-	NKX2-1,PAX9,SFTA3,NKX2-1	1126,138945,-4747,1653
chr11:74875056-74876875	chr11	+	74875339	74876778	True	NM_001005285,NM_001145211	chr11,chr11	-,+	OR2AT4,SLCO2B1	-74581,-4546
chr4:88311233-88311467	chr4	+	88311250	88311319	True	NM_024047,NM_016245	chr4,chr4	+,-	NUDT9,HSD17B11	32415,1195
chr21:43097392-43097796	chr21	+	43097573	43097830	True	NR_027272,NR_024367	chr21,chr21	-,+	C21orf129,NCRNA00111	38155,1631
chr1:228337418-228337965	chr1	+	228337593	228337965	True	NM_000858,NM_020435,NM_181465,NM_001159390,NM_001159391	chr1,chr1,chr1,chr1,chr1	+,+,-,+,+	GUK1,GJC2,MRPL55,GUK1,GUK1	-9715,-91,-40580,-9715,-5240
chr14:51271275-51272305	chr14	+	51271291	51272247	True	NM_181533,NM_020921	chr14,chr14	+,-	ABHD12B,NIN	66630,25642
chr19:46234866-46235095	chr19	+	46234913	46234991	True	NM_001080469,NM_017659	chr19,chr19	-,+	FBXO46,QPCTL	-762,-39230
chr11:122932641-122932845	chr11	+	122932720	122932894	True	NR_027288,NM_153201,NM_006597	chr11,chr11,chr11	+,-,-	LOC341056,HSPA8,HSPA8	-44497,0,0
chr20:62681402-62681842	chr20	+	62681492	62681588	True	NM_198723,NM_018419	chr20,chr20	+,-	TCEA2,SOX18	6850,-513
chr3:12417741-12418182	chr3	+	12417764	12418218	True	NM_001195279,NM_015869	chr3,chr3	-,+	LOC100129480,PPARG	168796,-24826
chr5:147769446-147771415	chr5	+	147769661	147771193	True	NM_205836,NM_030793,NM_001040169	chr5,chr5,chr5	+,+,-	FBXO38,FBXO38,HTR4	-6173,-6173,245481
chr4:71705971-71706334	chr4	+	71705975	71706095	True	NM_001098477,NM_173468,NM_002092	chr4,chr4,chr4	-,+,-	GRSF1,MOBKL1A,GRSF1	-755,61968,-348
chr11:18283161-18284408	chr11	+	18283170	18284322	True	NM_000331,NM_001178006,NM_199161,NM_030754	chr11,chr11,chr11,chr11	+,+,+,-	SAA1,SAA1,SAA1,SAA2	3485,3485,3485,-12949
chr1:182455208-182456103	chr1	+	182455208	182456152	True	NM_172000,NM_001137669	chr1,chr1	-,+	TEDDM1,RGSL1	-85457,-36009
chr1:9973642-9974052	chr1	+	9973730	9973902	True	NM_022787,NM_001012329,NM_020248	chr1,chr1,chr1	+,-,-	NMNAT1,CTNNBIP1,CTNNBIP1	29583,-3414,-3414
chr5:34837710-34838989	chr5	+	34837718	34838973	True	NM_144725,NR_026591	chr5,chr5	+,-	TTC23L,RAD1	295,76808
chr16:69790589-69792070	chr16	+	69790661	69791887	True	NM_014062,NM_199423,NM_007014	chr16,chr16,chr16	-,+,+	NOB1,WWP2,WWP2	-1832,4386,4386
chr3:182513299-182515215	chr3	+	182513320	182514763	True	NM_014616,NM_020640	chr3,chr3	+,-	ATP11B,DCUN1D1	-2080,183613
chr2:74694214-74694627	chr2	+	74694321	74694659	True	NM_001146158,NM_006302,NM_012477,NM_053050	chr2,chr2,chr2,chr2	-,-,+,-	MOGS,MOGS,WBP1,MRPL53	-1784,-1784,-8851,5333
chr1:17377069-17378186	chr1	+	17377251	17378077	True	NM_014675,NM_003000	chr1,chr1	+,-	CROCC,SDHB	-128869,2638
chr15:68519670-68520372	chr15	+	68519713	68520293	True	NM_017882,NM_015322	chr15,chr15	-,+	CLN6,FEM1B	1837,49847
chr8:120431485-120431820	chr8	+	120431495	120431870	True	NM_002514,NM_001040092	chr8,chr8	+,-	NOV,ENPP2	-2994,219291
chr2:231732667-231732966	chr2	+	231732674	231732900	True	NM_001012516,NM_030926,NM_001012514,NM_005683	chr2,chr2,chr2,chr2	+,+,+,-	ITM2C,ITM2C,ITM2C,GPR55	-3104,-3104,-3104,57091
chr9:130342503-130343391	chr9	+	130342652	130343368	True	NM_001032221,NM_001035534	chr9,chr9	+,-	STXBP1,FAM129B	31117,-1384
chr9:104239077-104239335	chr9	+	104239161	104239253	True	NM_019592,NM_032342	chr9,chr9	+,-	RNF20,C9orf125	56879,10272
chr19:49835533-49836584	chr19	+	49835857	49836126	True	NM_001040031,NM_014037,NM_001774	chr19,chr19,chr19	+,-,+	CD37,SLC6A16,CD37	2550,-7383,2550
chr20:1206348-1206712	chr20	+	1206670	1206746	True	NM_018354,NM_001136566	chr20,chr20	-,+	C20orf46,RAD21L1	-41553,17
chr17:33884940-33886766	chr17	+	33885014	33886703	True	NR_003037,NM_001129820	chr17,chr17	+,-	SNORD7,SLFN14	13972,84
chr2:173711477-173712238	chr2	+	173711512	173712112	True	NR_026995,NM_001100397	chr2,chr2	-,+	LOC91149,RAPGEF4	-110578,-25248
chr11:59437098-59438167	chr11	+	59437107	59438006	True	NM_152716,NM_001178040	chr11,chr11	-,+	PATL1,STX3	-596,84525
chr13:53032880-53034670	chr13	+	53033027	53034385	True	NM_001098525,NM_016075,NM_018204	chr13,chr13,chr13	+,-,+	CKAP2,VPS36,CKAP2	-3596,-8264,-3596
chr20:49412199-49412417	chr20	+	49412207	49412435	True	NM_198799,NM_015339,NM_017843,NM_001010974	chr20,chr20,chr20,chr20	+,-,+,+	BCAS4,ADNP,BCAS4,BCAS4	-799,135148,-799,-799
chr12:53819138-53819477	chr12	+	53819141	53819523	True	NM_001193511,NM_020547,NM_001164691,NM_001164690	chr12,chr12,chr12,chr12	-,+,+,+	MAP3K12,AMHR2,AMHR2,AMHR2	73971,-1553,-1553,-1553
chr4:72220133-72221560	chr4	+	72220479	72221571	True	NM_000583,NM_003759	chr4,chr4	-,+	GC,SLC4A4	428558,-15760
chr5:14665466-14666735	chr5	+	14665556	14666611	True	NM_138348,NR_037899	chr5,chr5	+,-	FAM105B,LOC100128508	-824,110580
chr3:69438275-69439531	chr3	+	69438541	69439506	True	NM_006407,NM_015123	chr3,chr3	+,-	ARL6IP5,FRMD4B	-304510,-3111
chr14:25520996-25521484	chr14	+	25521075	25521513	True	NM_015299,NM_014178	chr14,chr14	+,-	KHNYN,STXBP6	-621992,-1980
chr16:85206245-85206487	chr16	+	85206250	85206512	True	NR_033984,NM_198491	chr16,chr16	+,-	LOC400548,FAM92B	-35548,-60136
chr22:45637280-45637493	chr22	+	45637406	45637510	True	NM_001009880,NM_001167574	chr22,chr22	-,+	KIAA0930,UPK3A	-756,43357
chr1:48296903-48297927	chr1	+	48296940	48297683	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	164930,390673
chr9:35826205-35826894	chr9	+	35826227	35826787	True	NM_001042589,NM_001012446,NM_001042590,NM_016446	chr9,chr9,chr9,chr9	+,-,+,+	TMEM8B,C9orf128,TMEM8B,TMEM8B	2441,2009,2725,2434
chr2:73493072-73493599	chr2	+	73493198	73493594	True	NR_029403,NM_001080410	chr2,chr2	+,-	CCT7,FBXO41	-31886,3214
chr7:140618463-140618869	chr7	+	140618476	140618664	True	NM_001195278,NM_004333	chr7,chr7	+,-	LOC100131199,BRAF	155367,5958
chr15:40824217-40825011	chr15	+	40824227	40824745	True	NR_002208,NM_152260	chr15,chr15	-,+	MRPL42P5,RPUSD2	54,36791
chr5:137076573-137077258	chr5	+	137076739	137077293	True	NM_017415,NR_002713	chr5,chr5	-,+	KLHL3,NPY6R	-4960,59588
chr19:55628193-55628561	chr19	+	55628223	55628413	True	NM_017607,NM_017729	chr19,chr19	-,+	PPP1R12C,EPS8L1	564,-36514
chr5:180256527-180256794	chr5	+	180256716	180256792	True	NR_027183,NM_001114617	chr5,chr5	+,-	LOC729678,MGAT1	166,-19579
chr7:74868099-74868464	chr7	+	74868136	74868508	True	NM_001145064,NR_003664	chr7,chr7	-,+	GATSL2,SPDYE8P	-795,68024
chr7:74868099-74868464	chr7	-	72568149	72568475	False	NR_002206,NR_003664,NR_003580	chr7,chr7,chr7	+,-,+	GTF2IP1,SPDYE8P,LOC100093631	550,-67840,536
chr7:74868099-74868464	chr7	-	74378697	74378777	False	NM_001025202,NM_001145063	chr7,chr7	-,+	STAG3L2,GATSL1	-71966,305
chr7:74868099-74868464	chr7	+	74653995	74654321	False	NR_002206,NM_001003795,NR_003580	chr7,chr7,chr7	-,+,-	GTF2IP1,GTF2IRD2B,LOC100093631	-550,-145699,-536
chr19:18655104-18656602	chr19	+	18655221	18655550	True	NM_012181,NM_001171948	chr19,chr19	-,+	FKBP8,C19orf50	-838,13021
chr8:139512081-139512969	chr8	+	139512143	139512935	True	NM_015912,NM_017444	chr8,chr8	-,+	FAM135B,CHRAC1	-3078,2008465
chr12:54888793-54890495	chr12	+	54888821	54890474	True	NM_005337,NM_144594,NM_001184976	chr12,chr12,chr12	+,-,+	NCKAP1L,GTSF1,NCKAP1L	1020,-21435,2093
chr17:41561367-41561683	chr17	+	41561458	41561670	True	NM_001986,NM_004941	chr17,chr17	-,+	ETV4,DHX8	61685,-175
chr18:23713836-23714049	chr18	+	23713907	23714061	True	NM_001025097,NM_001025096,NM_005637,NM_144662	chr18,chr18,chr18,chr18	+,+,-,+	PSMA8,PSMA8,SS18,PSMA8	-142,-142,-43296,-142
chr9:710337-711248	chr9	+	710643	711245	True	NM_152569,NM_153186	chr9,chr9	-,+	C9orf66,KANK1	-494750,-3804
chr15:42305049-42305842	chr15	+	42305296	42305860	True	NM_001080490,NM_001114633	chr15,chr15	-,+	PLA2G4E,PLA2G4B	-2851,-174336
chr3:49760431-49761186	chr3	+	49760461	49761086	True	NM_013334,NM_198722,NM_021971,NM_022064	chr3,chr3,chr3,chr3	-,-,-,+	GMPPB,AMIGO3,GMPPB,RNF123	348,-3223,348,-33522
chr5:140098872-140099496	chr5	+	140099122	140099516	True	NR_026705,NR_026704,NM_002109,NR_026703	chr5,chr5,chr5,chr5	+,+,-,+	VTRNA1-3,VTRNA1-2,HARS,VTRNA1-1	6227,-670,-28151,-8320
chr17:39685080-39685446	chr17	+	39685332	39685494	True	NM_002276,NM_005801	chr17,chr17	-,+	KRT19,EIF1	-691,159632
chr5:142818240-142819011	chr5	+	142818263	142818807	True	NM_021182,NM_001018077,NM_001018075,NM_001018074	chr5,chr5,chr5,chr5	+,-,-,-	HMHB1,NR3C1,NR3C1,NR3C1	372918,-3186,-3186,-3186
chr18:3450999-3451338	chr18	+	3451015	3451317	True	NM_019856,NM_173211,NM_173210,NM_003244,NM_170695,NM_173208,NM_173209,NM_173207	chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18	-,+,+,+,+,+,+,+	MYOM1,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1	-230909,2454,273,-894,273,-1035,-1093,-3458
chr10:124179032-124179558	chr10	+	124179058	124179572	True	NM_001010912,NR_037506	chr10,chr10	-,+	C10orf120,MIR3941	279816,-2628
chr19:18632039-18632241	chr19	+	18632114	18632176	True	NM_001171948,NM_006532	chr19,chr19	+,-	C19orf50,ELL	36395,811
chr13:114999004-114999290	chr13	+	114999015	114999307	True	NM_001078645,NM_003903,NM_007368	chr13,chr13,chr13	+,+,-	CDC16,CDC16,RASA3	1054,1054,-100920
chr2:160651218-160651455	chr2	+	160651404	160651464	True	NM_001198764,NM_022826,NM_014880,NM_001198763	chr2,chr2,chr2,chr2	-,+,-,-	CD302,MARCH7,CD302,CD302	3352,-82445,3352,3352
chr18:45448380-45448971	chr18	+	45448433	45449019	True	NM_005901,NM_001142397,NM_001135937,NM_001003652	chr18,chr18,chr18,chr18	-,+,-,-	SMAD2,CTIF,SMAD2,SMAD2	7957,616407,8546,8543
chr17:20061139-20062216	chr17	+	20061389	20061999	True	NM_007202,NM_001033555,NM_001033554	chr17,chr17,chr17	-,+,+	AKAP10,SPECC1,SPECC1	-180260,-2038,-2038
chr17:4607916-4609286	chr17	+	4608217	4609008	True	NM_004313,NM_199004,NM_014389	chr17,chr17,chr17	+,+,-	ARRB2,ARRB2,PELP1	4780,4780,-585
chr5:121301894-121303297	chr5	+	121302102	121303147	True	NM_152546,NM_001178102	chr5,chr5	+,-	SRFBP1,LOX	-4505,109832
chr12:49259008-49259402	chr12	+	49259049	49259333	True	NM_014470,NM_033124	chr12,chr12	-,+	RND1,CCDC65	370,38559
chr6:26370048-26370621	chr6	+	26370170	26370606	True	NM_003543,NM_007047,NM_001197248,NM_001197249,NM_001197246,NM_001197247	chr6,chr6,chr6,chr6,chr6,chr6	-,+,+,+,+,+	HIST1H4H,BTN3A2,BTN3A2,BTN3A2,BTN3A2,BTN3A2	-84443,-4823,-4751,-4823,-1815,-4823
chr14:21538005-21538244	chr14	+	21538162	21538224	True	NM_016423,NM_018071	chr14,chr14	-,+	ZNF219,ARHGEF40	28634,302
chr1:85507475-85508932	chr1	+	85507688	85508871	True	NM_145172,NM_018298	chr1,chr1	+,-	WDR63,MCOLN3	19121,5348
chr20:29522338-29522976	chr20	+	29522444	29522941	True	NM_001037731,NR_003579	chr20,chr20	-,+	DEFB116,FRG1B	373500,88937
chr22:41987147-41987669	chr22	+	41987416	41987625	True	NM_002676,NM_001469	chr22,chr22	-,+	PMM1,XRCC6	-1545,29669
chr4:152682446-152684360	chr4	+	152682627	152684395	True	NM_004564,NM_001109977	chr4,chr4	-,+	PET112L,FAM160A1	-452,-352280
chr12:10319470-10321184	chr12	+	10319533	10320731	True	NM_153022,NM_001172632,NM_001172633,NM_002543	chr12,chr12,chr12,chr12	+,-,-,-	C12orf59,OLR1,OLR1,OLR1	10825,4109,4109,4109
chr13:31305452-31305966	chr13	+	31305451	31306015	True	NM_001629,NM_002128	chr13,chr13	+,-	ALOX5AP,HMGB1	3629,-265370
chr10:70716720-70716923	chr10	+	70716807	70716976	True	NM_004728,NM_152707	chr10,chr10	+,-	DDX21,SLC25A16	-967,-429527
chr3:36784349-36784591	chr3	+	36784380	36784616	True	NM_000249,NM_033403	chr3,chr3	+,-	MLH1,DCLK3	250224,-3028
chr2:182556376-182557751	chr2	+	182556436	182557759	True	NM_002500,NM_001130445	chr2,chr2	-,+	NEUROD1,SSFA2	-11044,198712
chr9:119449161-119449438	chr9	+	119449221	119449435	True	NM_001099679,NM_198186,NM_198187,NM_012210,NM_001184734,NM_001184735,NM_198188	chr9,chr9,chr9,chr9,chr9,chr9,chr9	+,-,-,+,-,-,-	TRIM32,ASTN2,ASTN2,TRIM32,ASTN2,ASTN2,ASTN2	145,109,157,145,157,157,157
chr20:55203943-55204225	chr20	+	55203964	55204196	True	NM_080615,NM_003222	chr20,chr20	-,+	GCNT7,TFAP2C	-102983,161
chr22:30643016-30643248	chr22	+	30643104	30643297	True	NM_001017437,NM_002309	chr22,chr22	+,-	CCDC157,LIF	109329,-308
chr5:25262180-25263415	chr5	+	25262310	25263399	True	NR_037896,NM_020227	chr5,chr5	-,+	LOC340107,PRDM9	-421618,-1754651
chr6:24399518-24400384	chr6	+	24399669	24400243	True	NM_001195610,NM_020662	chr6,chr6	-,+	DCDC2,MRS2	-16149,2909
chr6:27839196-27839901	chr6	+	27839336	27839902	True	NM_003546,NM_003511,NM_003533,NM_005322	chr6,chr6,chr6,chr6	-,+,-,-	HIST1H4L,HIST1H2AL,HIST1H3I,HIST1H1B	1437,-6280,247,-3977
chr11:56257707-56258483	chr11	+	56257990	56258528	True	NM_001005282,NM_001013356	chr11,chr11	-,+	OR5M8,OR8U8	368,-114948
chr19:55971907-55972340	chr19	+	55971913	55972131	True	NM_024710,NM_033113,NM_001136202,NM_001136201	chr19,chr19,chr19,chr19	-,+,-,-	ISOC2,ZNF628,ISOC2,ISOC2	972,15567,972,972
chr10:14372153-14372822	chr10	+	14372391	14372865	True	NR_031668,NM_018027	chr10,chr10	+,-	MIR1265,FRMD4A	105709,51
chr11:20387182-20387806	chr11	+	20387182	20387620	True	NM_001029865,NM_006410,NM_001098521,NM_001098520,NM_001098523,NM_001098522	chr11,chr11,chr11,chr11,chr11,chr11	-,+,+,+,+,+	DBX1,HTATIP2,HTATIP2,HTATIP2,HTATIP2,HTATIP2	-205312,-2005,-1989,-1947,-1549,-1833
chr14:74083254-74083771	chr14	+	74083446	74083818	True	NM_001037162,NM_203309	chr14,chr14	+,-	ACOT6,HEATR4	51,-57795
chr19:59032656-59033822	chr19	+	59032770	59033413	True	NM_012254,NM_032792,NM_005762	chr19,chr19,chr19	-,-,+	SLC27A5,ZBTB45,TRIM28	-9338,-1849,22422
chr1:153700251-153700483	chr1	+	153700306	153700466	True	NM_023015,NM_004515	chr1,chr1	+,-	INTS3,ILF2	100,-56827
chr12:7171109-7171656	chr12	+	7171227	7171646	True	NM_001734,NM_201442,NM_005768	chr12,chr12,chr12	+,+,-	C1S,C1S,LPCAT3	-3298,-3298,-45385
chr10:28967217-28967686	chr10	+	28967308	28967680	True	NR_033805,NM_012342	chr10,chr10	-,+	LOC220906,BAMBI	-146025,-942
chr20:60940704-60941081	chr20	+	60940836	60941126	True	NM_001024,NM_005560	chr20,chr20	+,-	RPS21,LAMA5	20994,1292
chr19:6332271-6333188	chr19	+	6332594	6333228	True	NM_006012,NM_133492	chr19,chr19	+,-	CLPP,ACER1	28234,462
chr9:125694418-125694966	chr9	+	125694417	125695015	True	NM_012197,NM_020924	chr9,chr9	+,-	RABGAP1,ZBTB26	8272,-638
chr15:90315769-90317551	chr15	+	90315882	90317432	True	NM_001039958,NM_018670	chr15,chr15	+,-	MESP2,MESP1	2156,-21342
chr9:86236070-86237121	chr9	+	86236215	86237025	True	NM_001190727,NM_174938,NM_001001551	chr9,chr9,chr9	+,-,+	C9orf103,FRMD3,C9orf103	1007,-82867,1007
chrX:133771800-133772701	chrX	+	133771913	133772724	True	NM_021796,NM_001170780	chrX,chrX	-,+	PLAC1,FAM122C	19839,157718
chr10:134257055-134257837	chr10	+	134257210	134257294	True	NM_173541,NM_173575	chr10,chr10	+,-	C10orf91,STK32C	1419,-135733
chr22:18894288-18894532	chr22	+	18894314	18894574	True	NM_001195226,NM_005675	chr22,chr22	-,+	PRODH,DGCR6	29440,-629
chrX:48333479-48334301	chrX	+	48333711	48334333	True	NM_012280,NM_033518,NM_177439,NM_177434	chrX,chrX,chrX,chrX	+,-,+,+	FTSJ1,SLC38A5,FTSJ1,FTSJ1	215,-5067,215,2046
chrX:152760491-152760691	chrX	+	152760493	152760719	True	NM_001711,NM_017518	chrX,chrX	+,-	BGN,HAUS7	-197,-23890
chr7:103088197-103089198	chr7	+	103088200	103088765	True	NM_206885,NM_206884,NM_206883,NM_002803,NM_198999,NM_001167962	chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,+,-,-	SLC26A5,SLC26A5,SLC26A5,PSMC2,SLC26A5,SLC26A5	-1576,-1576,-1576,-100289,-1576,-1576
chr11:60392018-60392589	chr11	+	60392066	60392360	True	NR_026946,NM_004778	chr11,chr11	+,-	C11orf64,GPR44	-8897,231138
chr7:150690731-150690990	chr7	+	150690862	150690924	True	NM_172056,NM_000603,NM_001160110,NM_001160111,NM_001160109	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	KCNH2,NOS3,NOS3,NOS3,NOS3	-15460,-2769,-21,-21,-21
chr1:66998968-66999366	chr1	+	66999111	66999405	True	NM_005478,NM_032291	chr1,chr1	-,+	INSL5,SGIP1	267587,419
chr7:112430141-112430405	chr7	+	112430159	112430409	True	NM_182597,NM_022484	chr7,chr7	+,-	C7orf53,TMEM168	-309144,119
chrX:51638073-51638822	chrX	+	51638160	51638782	True	NM_001005333,NR_003711,NM_006986	chrX,chrX,chrX	+,-,+	MAGED1,SNORA11D,MAGED1	-1513,167837,-1513
chr9:139879091-139879406	chr9	+	139879165	139879391	True	NM_000954,NM_183241,NM_004669,NM_207510	chr9,chr9,chr9,chr9	+,+,-,+	PTGDS,C9orf142,CLIC3,LCNL1	-7260,7478,11683,-1771
chr11:1035107-1035489	chr11	+	1035234	1035520	True	NM_002457,NM_005961	chr11,chr11	+,-	MUC2,MUC6	39354,1236
chr11:118402545-118402949	chr11	+	118402705	118402949	True	NM_001144038,NM_001144035,NM_001144034,NM_001144037,NM_001144036,NM_001080441,NM_001168618,NM_032780	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,+,-,+	TMEM25,TMEM25,TMEM25,TMEM25,TMEM25,TTC36,IFT46,TMEM25	-953,-953,-953,-953,-953,-4546,33892,-953
chr10:94834580-94834822	chr10	+	94834657	94834857	True	NM_013451,NM_057157,NM_000783	chr10,chr10,chr10	-,+,+	MYOF,CYP26A1,CYP26A1	407267,-1476,-1061
chr17:1391897-1392357	chr17	+	1391926	1392396	True	NM_001080779,NM_001080950,NR_028514,NM_033375	chr17,chr17,chr17,chr17	-,-,+,-	MYO1C,MYO1C,LOC100306951,MYO1C	3655,-2875,27816,2626
chr9:130862802-130863093	chr9	+	130862841	130863067	True	NM_052901,NR_033374,NM_001006643,NM_001006642	chr9,chr9,chr9,chr9	+,-,+,+	SLC25A25,LOC100289019,SLC25A25,SLC25A25	-2075,17996,-2056,-8764
chr2:23643333-23644122	chr2	+	23643383	23644115	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	505869,-35136
chr9:19307202-19307487	chr9	+	19307275	19307494	True	NM_001010,NM_017925	chr9,chr9	-,+	RPS6,DENND4C	72796,-16577
chr2:85199318-85199696	chr2	+	85199329	85199737	True	NM_020122,NM_001080824	chr2,chr2	+,-	KCMF1,C2orf89	-1149,-91077
chr15:79575603-79576074	chr15	+	79575686	79576074	True	NM_001146341,NM_002891	chr15,chr15	+,-	ANKRD34C,RASGRF1	-596,-192471
chr16:48773786-48774194	chr16	+	48773829	48774070	True	NM_153029,NM_031490	chr16,chr16	-,+	N4BP1,LONP2	-129709,-495669
chr2:88470330-88470602	chr2	+	88470440	88470577	True	NM_018271,NM_001443	chr2,chr2	+,-	THNSL2,FABP1	-656,-42790
chr12:120553953-120554193	chr12	+	120553957	120554155	True	NM_006861,NM_207311,NM_001167606	chr12,chr12,chr12	-,+,-	RAB35,CCDC64,RAB35	538,-126360,538
chr11:60670990-60671315	chr11	+	60670991	60671291	True	NM_014502,NM_024092	chr11,chr11	-,+	PRPF19,TMEM109	2820,10079
chr5:150630140-150631392	chr5	+	150630146	150631441	True	NM_000405,NM_015621,NM_001167607	chr5,chr5,chr5	+,-,+	GM2A,CCDC69,GM2A	1171,-26492,1171
chr19:3985599-3986287	chr19	+	3985675	3986218	True	NR_002602,NM_015897,NM_001961	chr19,chr19,chr19	-,+,-	SNORD37,PIAS4,EEF2	-3105,21530,-214
chr17:4047600-4048171	chr17	+	4047658	4048090	True	NM_144611,NM_015113,NR_023346,NR_023347	chr17,chr17,chr17,chr17	+,-,+,+	CYB5D2,ZZEF1,CYB5D2,CYB5D2	-1254,-1405,-1254,-1254
chr7:65579831-65580076	chr7	+	65579870	65580022	True	NR_024548,NM_001040647,NM_014478,NM_001040648,NM_001142414,NM_000181	chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,+,-	CRCP,CRCP,CRCP,CRCP,CRCP,GUSB	-116,-116,-116,-116,-116,-132569
chr1:205325723-205326138	chr1	+	205325746	205326166	True	NM_014858,NM_018203	chr1,chr1	+,-	TMCC2,KLHDC8A	-128759,-43
chr4:85420018-85420232	chr4	+	85420157	85420227	True	NM_001263,NM_006168	chr4,chr4	+,-	CDS1,NKX6-1	83829,-770
chr11:59221273-59222500	chr11	+	59221543	59221912	True	NM_001004708,NM_001001954	chr11,chr11	+,-	OR4D6,OR5A2	2521,-31117
chr7:134889255-134889787	chr7	+	134889292	134889787	True	NM_014149,NM_182489	chr7,chr7	-,+	WDR91,STRA8	6579,26943
chr14:100064661-100064916	chr14	+	100064661	100064823	True	NM_032425,NM_001144995	chr14,chr14	+,-	HHIPL1,CCDC85C	46656,5954
chr3:44385555-44386431	chr3	+	44385799	44386435	True	NM_001029840,NM_001029839,NM_173826,NM_181489	chr3,chr3,chr3,chr3	+,+,+,-	C3orf23,C3orf23,C3orf23,ZNF445	-6255,-5922,-5922,132779
chr2:109745951-109746387	chr2	+	109745995	109746365	True	NR_029193,NM_001099289	chr2,chr2	-,+	LOC100287216,SH3RF3	260,-49
chr22:42538727-42538986	chr22	+	42538777	42539003	True	NR_002570,NR_034118	chr22,chr22	-,+	CYP2D7P1,LOC100132273	1622,-51891
chr18:33768124-33768494	chr18	+	33768152	33768372	True	NM_017947,NM_001099406	chr18,chr18	+,-	MOCOS,SLC39A6	-725,-58795
chr17:73513409-73513757	chr17	+	73513416	73513806	True	NM_020753,NM_001142643,NM_004524,NM_001015002,NM_001031803,NM_207346	chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,+,+,+	CASKIN2,CASKIN2,LLGL2,LLGL2,LLGL2,TSEN54	-1789,-7458,7976,7976,7976,-858
chrX:84638785-84640405	chrX	+	84638837	84640420	True	NM_021998,NM_024921	chrX,chrX	+,-	ZNF711,POF1B	-139901,-4089
chr19:39302786-39303044	chr19	+	39302794	39302886	True	NM_006149,NM_001042507	chr19,chr19	-,+	LGALS4,LGALS7B	904,-22995
chr1:152572042-152573328	chr1	+	152572192	152573063	True	NM_032563,NM_178434	chr1,chr1	-,+	LCE3D,LCE3C	-19212,74
chr1:48265376-48267238	chr1	+	48265564	48267210	True	NM_001194986,NM_004474	chr1,chr1	-,+	LOC388630,FOXD2	195402,-363926
chr10:43965553-43966126	chr10	+	43965552	43965774	True	NR_026693,NM_001098204	chr10,chr10	+,-	ZNF487P,HNRNPF	-33031,-60856
chr17:7493344-7493740	chr17	+	7493392	7493688	True	NM_004870,NM_006942,NR_024603	chr17,chr17,chr17	+,-,+	MPDU1,SOX15,MPDU1	-6478,10,-6478
chr16:19724968-19725597	chr16	+	19724996	19725556	True	NM_153208,NM_001012991	chr16,chr16	+,-	IQCK,C16orf88	2221,3986
chr15:59068152-59069197	chr15	+	59068444	59068950	True	NM_001040450,NM_001110,NM_001040453	chr15,chr15,chr15	+,-,+	FAM63B,ADAM10,FAM63B	-5102,-26267,-5102
chrX:69481840-69482222	chrX	+	69481847	69482239	True	NM_004312,NM_002565	chrX,chrX	+,-	ARR3,P2RY4	5945,-2193
chr2:224583317-224583737	chr2	+	224583363	224583568	True	NM_022915,NM_003469	chr2,chr2	+,-	MRPL44,SCG2	238552,-116146
chr6:165724882-165725324	chr6	+	165724900	165725258	True	NM_144980,NR_027284	chr6,chr6	-,+	C6orf118,LOC441177	-1789,675780
chr1:156052753-156053313	chr1	+	156052941	156053312	True	NM_001093725,NM_020387	chr1,chr1	-,+	MEX3A,RAB25	-1152,-22026
chr1:183265282-183266300	chr1	+	183265281	183266343	True	NM_170706,NM_005562	chr1,chr1	-,+	NMNAT2,LAMC2	7716,-110168
chr5:140045701-140046027	chr5	+	140045984	140046044	True	NM_017706,NM_194249	chr5,chr5	+,-	WDR55,DND1	-1654,7177
chr6:143266291-143266498	chr6	+	143266291	143266351	True	NM_016108,NM_006734	chr6,chr6	+,-	AIG1,HIVEP2	115671,37
chr8:30916349-30917377	chr8	+	30916656	30917263	True	NM_000553,NM_001015508	chr8,chr8	+,-	WRN,PURG	-25929,-25425
chr14:72014169-72015333	chr14	+	72014401	72015205	True	NM_015556,NM_033141	chr14,chr14	+,-	SIPA1L1,MAP3K9	-18410,-738513
chr12:118867305-118867698	chr12	+	118867372	118867736	True	NM_022491,NM_016281	chr12,chr12	+,-	SUDS3,TAOK3	-53074,-56622
chr16:50398005-50398858	chr16	+	50398007	50398890	True	NM_001114,NM_013263,NM_001173984	chr16,chr16,chr16	+,-,-	ADCY7,BRD7,BRD7	-76236,4006,4006
chr6:43610902-43611382	chr6	+	43611005	43611198	True	NM_014628,NM_152732,NM_019096,NM_001193341	chr6,chr6,chr6,chr6	+,+,-,+	MAD2L1BP,RSPH9,GTPBP2,RSPH9	-7487,1568,-14069,1568
chr17:73261878-73262875	chr17	+	73262054	73262860	True	NM_015971,NR_036520,NM_001172703,NM_001172704,NM_138619,NM_020679,NR_033345,NM_014001	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,-,-,-,-,-,-	MRPS7,LOC100287042,GGA3,GGA3,GGA3,MIF4GD,GGA3,GGA3	-4356,4519,-3610,-3610,-4347,4493,-4347,-4347
chr6:74361482-74362461	chr6	+	74361675	74362488	True	NM_001159587,NM_012434	chr6,chr6	+,-	CD109,SLC17A5	43019,1299
chr15:41222704-41223818	chr15	+	41222713	41223846	True	NM_019074,NM_133639	chr15,chr15	+,-	DLL4,RHOV	-1233,-56226
chr9:15552590-15553015	chr9	+	15552603	15552979	True	NM_173550,NM_033222	chr9,chr9	+,-	C9orf93,PSIP1	117,-41600
chr17:4843373-4843674	chr17	+	4843442	4843707	True	NM_001165418,NM_005022,NM_001165417,NM_003562,NM_000173,NM_015528	chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,+,+	SLC25A11,PFN1,SLC25A11,SLC25A11,GP1BA,RNF167	16,8168,16,16,-7901,51
chr3:49466939-49468032	chr3	+	49467156	49467566	True	NR_028435,NM_022171,NM_000481,NM_032316,NM_001164712,NM_001164710,NM_001164711	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-,-	AMT,TCTA,AMT,NICN1,AMT,AMT,AMT	-7045,-17568,-7045,-399,-7045,-7045,-7045
chr2:53993361-53994934	chr2	+	53993448	53994825	True	NM_001201965,NM_001008708	chr2,chr2	-,+	ASB3,CHAC2	19211,103
chr6:44128074-44129027	chr6	+	44128384	44128886	True	NM_007058,NM_032111	chr6,chr6	+,-	CAPN11,MRPL14	-1888,-33193
chr6:27110506-27110868	chr6	+	27110694	27110857	True	NM_021064,NM_080596,NM_003495,NR_036096,NM_080593	chr6,chr6,chr6,chr6,chr6	+,+,+,+,-	HIST1H2AG,HIST1H2AH,HIST1H4I,MIR3143,HIST1H2BK	-9938,4050,-3667,4547,3831
chrX:48815387-48815589	chrX	+	48815396	48815628	True	NM_001167992,NM_001136159,NM_001136158,NM_001136157,NM_017602	chrX,chrX,chrX,chrX,chrX	+,-,-,-,-	PQBP1,OTUD5,OTUD5,OTUD5,OTUD5	-59672,70,-503,-503,-503
chr8:30516357-30517195	chr8	+	30516405	30517012	True	NM_002095,NM_005671	chr8,chr8	-,+	GTF2E2,UBXN8	-667,84677
chr7:128500957-128501498	chr7	+	128501018	128501361	True	NM_001198909,NM_001195150,NM_004231,NM_001135914	chr7,chr7,chr7,chr7	+,+,+,-	ATP6V1F,LOC100130705,ATP6V1F,KCP	1495,5102,1495,49465
chr2:97357261-97357659	chr2	+	97357540	97357612	True	NM_001142292,NM_001113382	chr2,chr2	-,+	LMAN2L,FER1L5	48251,-49017
chr4:964780-965439	chr4	+	964794	965334	True	NM_000203,NM_001347	chr4,chr4	+,-	IDUA,DGKQ	15450,2060
chr9:117565435-117566965	chr9	+	117565447	117566953	True	NM_153045,NM_005118	chr9,chr9	+,-	C9orf91,TNFSF15	-191793,1505
chr6:45345592-45345849	chr6	+	45345623	45345849	True	NM_004348,NM_181356,NM_003599	chr6,chr6,chr6	+,-,-	RUNX2,SUPT3H,SUPT3H	44064,43,-48
chr7:99071536-99071937	chr7	+	99071660	99071793	True	NM_213603,NM_001198879,NM_001003714,NM_001039178,NM_001003713,NM_001013258,NM_004889	chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,-,-,-,-,+,-	ZNF789,ATP5J2-PTCD1,ATP5J2,ATP5J2,ATP5J2,ZNF789,ATP5J2	-1196,-7836,-7836,-7836,-7836,-1196,-7836
chr17:56229631-56230682	chr17	+	56229732	56230666	True	NR_002307,NM_017777,NM_012374	chr17,chr17,chr17	+,-,+	MSX2P1,MKS1,OR4D1	3653,66050,1848
chr18:46063739-46064015	chr18	+	46063767	46063986	True	NM_001142397,NM_001039360,NM_014772	chr18,chr18,chr18	+,-,+	CTIF,ZBTB7C,CTIF	1440,-400087,1440
chr19:16736530-16737089	chr19	+	16736606	16737038	True	NM_004831,NM_024074	chr19,chr19	-,+	MED26,TMEM38A	2027,34899
chr2:3621751-3622388	chr2	+	3621777	3622265	True	NM_001011,NM_002936	chr2,chr2	+,-	RPS7,RNASEH1	587,-15837
chr19:41438137-41438437	chr19	+	41438197	41438411	True	NM_030589,NR_001278	chr19,chr19	-,+	CYP2A7,CYP2B7P1	-49540,-8078
chr18:14338606-14339246	chr18	+	14338699	14339253	True	NR_024076,NR_026756	chr18,chr18	-,+	CXADRP3,LOC284233	159502,-1328
chr1:152971355-152972889	chr1	+	152971535	152972857	True	NM_006945,NM_005416,NM_001097589	chr1,chr1,chr1	-,+,+	SPRR2D,SPRR3,SPRR3	40787,1365,1365
chr17:60705681-60706202	chr17	+	60705706	60706168	True	NM_001100875,NM_006039	chr17,chr17	-,+	MARCH10,MRC2	177894,-995
chr14:105885643-105885847	chr14	+	105885647	105885735	True	NM_004689,NM_001203258,NM_001519	chr14,chr14,chr14	+,+,-	MTA1,MTA1,BRF1	450,450,-118318
chr5:122366542-122368084	chr5	+	122366548	122368115	True	NM_001136239,NM_000943	chr5,chr5	+,-	PRDM6,PPIC	56725,4360
chr9:131452056-131452311	chr9	+	131452225	131452295	True	NM_052844,NM_001122821,NM_003011	chr9,chr9,chr9	-,+,+	WDR34,SET,SET	-33096,-6342,-767
chr19:9926421-9927739	chr19	+	9926630	9927630	True	NM_001048241,NM_017703	chr19,chr19	+,-	UBL5,FBXL12	10937,2151
chr1:201370473-201371339	chr1	+	201370644	201371354	True	NM_005558,NM_001005337,NR_026667	chr1,chr1,chr1	-,+,+	LAD1,PKP1,RPS10P7	-1975,-118115,117677
chr19:44115892-44116500	chr19	+	44116028	44116488	True	NM_001145641,NM_182498	chr19,chr19	+,-	SRRM5,ZNF428	16,7576
chr5:177631106-177631306	chr5	+	177631110	177631294	True	NR_003281,NM_031266,NM_004499	chr5,chr5,chr5	-,+,+	GMCL1L,HNRNPAB,HNRNPAB	-16677,213,213
chr1:156306915-156307299	chr1	+	156307219	156307299	True	NR_036564,NR_036565,NM_005998,NM_001008800,NM_144627	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	CCT3,CCT3,CCT3,CCT3,C1orf182	957,957,957,957,-166
chr10:46332845-46334532	chr10	+	46334177	46334260	True	NM_133446,NM_015262	chr10,chr10	-,+	AGAP4,FAM21C	8720,-111587
chr10:46332845-46334532	chr10	+	51237801	51237870	False	NM_001077686,NM_002443	chr10,chr10	-,+	AGAP8,MSMB	8724,311682
chr1:54410209-54410702	chr1	+	54410364	54410718	True	NM_052940,NM_016126	chr1,chr1	+,-	LRRC42,HSPB11	1318,620
chr5:26991267-26992923	chr5	+	26991286	26992843	True	NR_033961,NM_016279	chr5,chr5	+,-	LOC729862,CDH9	1934133,45903
chr3:97686161-97686388	chr3	+	97686165	97686353	True	NM_032778,NM_001042533,NM_153182,NM_054106	chr3,chr3,chr3,chr3	-,-,-,+	MINA,MINA,MINA,OR5AC2	4925,4925,4996,119663
chr17:18380214-18380542	chr17	+	18380352	18380578	True	NR_003554,NM_001040078	chr17,chr17	-,+	LOC220594,LGALS9C	44038,-304
chr17:18380214-18380542	chr17	-	20370373	20370423	False	NM_001190790,NM_001042685	chr17,chr17	+,-	CDRT15L2,LGALS9B	112613,475
chr17:18380214-18380542	chr17	-	20601786	20601836	False	NM_001190790,NR_029393	chr17,chr17	+,-	CDRT15L2,KRT16P3	-118800,-193975
chr10:118033129-118033526	chr10	+	118033254	118033558	True	NM_005264,NM_145793,NM_198515,NM_001145453	chr10,chr10,chr10,chr10	-,-,+,-	GFRA1,GFRA1,C10orf96,GFRA1	-128,-1435,50381,-458
chr15:73076295-73076935	chr15	+	73076333	73076796	True	NM_031284,NR_023319,NR_023318,NM_033028	chr15,chr15,chr15,chr15	-,-,-,+	ADPGK,ADPGK,ADPGK,BBS4	-207,-207,-207,-97859
chr19:8839402-8840245	chr19	+	8839408	8839678	True	NM_178525,NM_001004699	chr19,chr19	-,+	ACTL9,OR2Z1	-30236,1712
chr3:39162727-39162994	chr3	+	39162746	39162922	True	NM_031899,NM_145755	chr3,chr3	-,+	GORASP1,TTC21A	-13616,-13645
chr15:96937339-96938654	chr15	+	96937435	96938544	True	NM_001145157,NR_034095	chr15,chr15	+,-	NR2F2,LOC400456	-60919,-1067106
chr12:5290429-5292039	chr12	+	5290871	5292039	True	NM_006422,NM_002234	chr12,chr12	-,+	AKAP3,KCNA5	-536528,-137848
chr18:29026688-29027483	chr18	+	29026938	29027503	True	NM_004775,NM_001944	chr18,chr18	-,+	B4GALT6,DSG3	237234,228
chr11:118974625-118975352	chr11	+	118974747	118975369	True	NM_014807,NM_001382,NM_002105	chr11,chr11,chr11	+,-,-	C2CD2L,DPAGT1,H2AFX	2723,-1962,-8570
chr2:198243955-198245164	chr2	+	198244039	198245022	True	NM_025147,NM_012433	chr2,chr2	+,-	COQ10B,SF3B1	73208,54800
chr11:1889545-1890051	chr11	+	1889600	1890064	True	NR_036185,NM_001013254,NM_001013255,NM_001013253	chr11,chr11,chr11,chr11	-,+,+,+	MIR4298,LSP1,LSP1,LSP1	-8834,2034,2089,30
chr5:95996837-95997696	chr5	+	95997217	95997710	True	NM_001190442,NM_001042440,NM_016442	chr5,chr5,chr5	+,+,-	CAST,CAST,ERAP1	30,196,146233
chr1:32714180-32714751	chr1	+	32714312	32714602	True	NM_032648,NR_026850,NM_005356	chr1,chr1,chr1	+,-,+	FAM167B,MTMR9LP,LCK	-1545,-7001,2237
chr2:232652566-232653392	chr2	+	232652566	232653408	True	NM_022730,NM_002601	chr2,chr2	+,-	COPS7B,PDE6D	-1455,-6592
chr15:25449102-25449583	chr15	+	25449159	25449629	True	NR_003315,NR_003314,NR_003313,NR_003312,NR_003311,NR_003310,NR_022010,NR_003495,NR_003308,NR_003309,NM_130838,NR_003306,NR_003307	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,+,-,+,+	SNORD115-23,SNORD115-22,SNORD115-21,SNORD115-20,SNORD115-19,SNORD115-18,PAR4,SNORD115-24,SNORD115-16,SNORD115-17,UBE3A,SNORD115-14,SNORD115-15	7313,5435,1779,1779,42,42,7209,9176,-4615,42,201074,-9142,1779
chr4:178231479-178232549	chr4	+	178231520	178232514	True	NM_000027,NM_018248	chr4,chr4	-,+	AGA,NEIL3	131193,-588
chr2:178913902-178914192	chr2	+	178913901	178914029	True	NM_016953,NM_152945	chr2,chr2	-,+	PDE11A,RBM45	23509,63152
chr17:1182265-1182700	chr17	+	1182439	1182729	True	NM_001159746,NM_001164405,NM_172367	chr17,chr17,chr17	-,+,+	ABR,BHLHA9,TUSC5	-91823,-8632,227
chr14:105267912-105268346	chr14	+	105268075	105268253	True	NM_005163,NM_001137601,NM_001014431,NM_001014432	chr14,chr14,chr14,chr14	-,+,-,-	AKT1,ZBTB42,AKT1,AKT1	-8137,-1193,-5995,-5995
chr7:93548393-93549293	chr7	+	93548517	93549188	True	NM_004126,NM_006528	chr7,chr7	+,-	GNG11,TFPI2	1827,-28452
chr11:65557409-65558060	chr11	+	65557439	65558093	True	NM_138368,NM_004561	chr11,chr11	-,+	DKFZp761E198,OVOL1	-9617,-2961
chr1:100818448-100818722	chr1	+	100818629	100818771	True	NM_033313,NM_033312,NM_001918,NM_003672	chr1,chr1,chr1,chr1	+,+,-,+	CDC14A,CDC14A,DBT,CDC14A	-657,-657,-103220,-657
chr17:74024297-74025564	chr17	+	74024385	74025121	True	NM_001258,NM_001988	chr17,chr17	+,-	CDK3,EVPL	-27449,-878
chr3:197687283-197687707	chr3	+	197687371	197687711	True	NM_001136049,NR_026787,NR_026786,NM_032263,NM_033029	chr3,chr3,chr3,chr3,chr3	+,+,+,-,+	LMLN,LMLN,LMLN,IQCG,LMLN	-351,-351,-351,-485,-351
chrX:53445712-53446628	chrX	+	53446011	53446219	True	NM_006306,NM_001031745,NM_144968	chrX,chrX,chrX	-,+,+	SMC1A,RIBC1,RIBC1	3449,3670,3619
chr2:18744385-18745160	chr2	+	18744385	18745042	True	NM_020905,NM_002252	chr2,chr2	-,+	RDH14,KCNS3	-2426,-684498
chr17:66255046-66255272	chr17	+	66255066	66255224	True	NM_014960,NM_001174166	chr17,chr17	+,-	ARSG,SLC16A6	98,32231
chr11:126869643-126870225	chr11	+	126869737	126870215	True	NM_001161707,NM_006278,NM_032531	chr11,chr11,chr11	-,+,-	KIRREL3,ST3GAL4,KIRREL3	601,-643701,601
chr7:44060500-44061196	chr7	+	44060557	44060731	True	NR_015401,NR_003655	chr7,chr7	+,-	FLJ35390,POLR2J4	17966,-1809
chr7:44060500-44061196	chr7	+	102214952	102215002	False	NM_001166339,NM_001097615	chr7,chr7	+,-	SPDYE2L,POLR2J3	-23324,-1884
chr7:44060500-44061196	chr7	+	102314024	102314074	False	NM_032959,NM_001166339	chr7,chr7	-,+	POLR2J2,SPDYE2L	-1842,-23303
chr22:27041201-27041509	chr22	+	27041235	27041487	True	NR_003491,NM_001887	chr22,chr22	+,-	MIAT,CRYBB1	11958,-27244
chr15:43026971-43027510	chr15	+	43027108	43027496	True	NM_020759,NM_138477	chr15,chr15	+,-	STARD9,CDAN1	-159309,1971
chr1:6525739-6526053	chr1	+	6525952	6526024	True	NM_148967,NM_001039664,NM_003790,NM_031475,NM_148970,NM_148966,NM_148965	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,-,-	TNFRSF25,TNFRSF25,TNFRSF25,ESPN,TNFRSF25,TNFRSF25,TNFRSF25	281,281,281,-41155,281,281,281
chr15:45422453-45423372	chr15	+	45422482	45423408	True	NM_144565,NM_175940,NM_017434	chr15,chr15,chr15	-,+,+	DUOXA1,DUOX1,DUOX1	-425,-341,-341
chr3:126422890-126423096	chr3	+	126422894	126423126	True	NM_032343,NM_052883	chr3,chr3	+,-	CHCHD6,TXNRD3	-9,-48927
chr17:62011243-62011747	chr17	+	62011412	62011771	True	NM_001164257,NM_001039933,NM_000626,NM_021602	chr17,chr17,chr17,chr17	+,-,-,-	C17orf72,CD79B,CD79B,CD79B	63939,-1708,-1708,-1708
chrX:79268410-79269115	chrX	+	79268495	79269133	True	NM_001109878,NM_001109879,NM_004867,NM_016954	chrX,chrX,chrX,chrX	+,+,-,+	TBX22,TBX22,ITM2A,TBX22	1121,1121,-645446,8608
chr17:7285507-7285902	chr17	+	7285602	7285950	True	NM_003985,NM_001201576	chr17,chr17	+,-	TNK1,PLSCR3	-1288,12262
chr19:3178910-3179237	chr19	+	3179000	3179166	True	NM_003775,NM_198969,NM_020170	chr19,chr19,chr19	+,-,+	S1PR4,AES,NCLN	-315,-116036,6708
chr18:9913644-9913873	chr18	+	9913647	9913789	True	NM_194434,NM_005134,NM_003574	chr18,chr18,chr18	+,-,+	VAPA,PPP4R1,VAPA	165,-299047,165
chr15:78191238-78191889	chr15	+	78191276	78191668	True	NM_001101404,NR_027024	chr15,chr15	+,-	SH2D7,LOC645752	193258,27570
chr3:49131568-49132016	chr3	+	49131601	49132065	True	NM_199070,NM_017730,NM_198880	chr3,chr3,chr3	+,-,-	NDUFAF3,QRICH1,QRICH1	-72578,-97,-97
chr1:173794317-173794550	chr1	+	173794321	173794566	True	NM_033319,NM_001171182,NM_001127181,NM_018122	chr1,chr1,chr1,chr1	-,-,-,+	CENPL,CENPL,CENPL,DARS2	-544,-1051,-544,-575
chr16:30773176-30773388	chr16	+	30773290	30773354	True	NM_001195620,NM_014771,NM_001014979	chr16,chr16,chr16	-,+,-	C16orf93,RNF40,C16orf93	261,275,261
chr1:165663288-165664115	chr1	+	165663541	165663643	True	NM_000696,NR_036683	chr1,chr1	-,+	ALDH9A1,LOC440700	4307,4343
chr19:3136644-3136866	chr19	+	3136659	3136821	True	NM_198969,NM_002068	chr19,chr19	-,+	AES,GNA15	-73695,-519
chr18:46064015-46065373	chr18	+	46064457	46065125	True	NM_001142397,NM_001039360,NM_014772	chr18,chr18,chr18	+,-,+	CTIF,ZBTB7C,CTIF	301,-400777,301
chr5:53695480-53697231	chr5	+	53695838	53696879	True	NM_006308,NM_019087	chr5,chr5	+,-	HSPB3,ARL15	54551,-89435
chr3:16925118-16925439	chr3	+	16925143	16925341	True	NM_001144382,NM_001351	chr3,chr3	+,-	PLCL2,DAZL	1110,-278137
chrX:134126858-134128055	chrX	+	134127034	134127808	True	NM_001163438,NM_001078173	chrX,chrX	+,-	LOC644538,FAM127C	-2121,28822
chr1:120589581-120590160	chr1	+	120589706	120590032	True	NM_024408,NM_001100910	chr1,chr1	-,+	NOTCH2,FAM72B	22335,248972
chr1:120589581-120590160	chr1	-	145231412	145231738	False	NM_203458,NM_022359	chr1,chr1	+,-	NOTCH2NL,PDE4DIP	-22352,-155226
chrX:155123889-155125445	chrY	+	59226917	59228227	False	NR_033715,NR_002179	chrY,chrY	+,-	VAMP7,TTTY17C	-13019,-31895997
chrX:155123889-155125445	chrX	+	155123911	155125221	True	NR_033715,NM_018196	chrX,chrX	+,-	VAMP7,TMLHE	-13019,-281289
chr2:70354087-70355852	chr2	+	70354465	70355705	True	NM_006196,NR_024444	chr2,chr2	+,-	PCBP1,LOC100133985	-39931,-2017
chr4:140588733-140589098	chr4	+	140589041	140589141	True	NM_002413,NM_001204366,NM_001204367,NM_001204368,NM_030648	chr4,chr4,chr4,chr4,chr4	+,+,+,+,-	MGST2,MGST2,MGST2,MGST2,SETD7	-2178,-2178,-2178,-2178,-111464
chr1:185344225-185344521	chr1	+	185344229	185344511	True	NM_017673,NM_006469	chr1,chr1	+,-	SWT1,IVNS1ABP	-217997,-57768
chr7:64602088-64603234	chr7	+	64602200	64603249	True	NR_027393,NM_001007253	chr7,chr7	+,-	INTS4L1,ERV3	-648,-135076
chr7:64602088-64603234	chr7	+	65113379	65114355	False	NM_000181,NR_027392	chr7,chr7	-,+	GUSB,INTS4L2	332997,-653
chr7:64602088-64603234	chr7	-	64972226	64973276	False	NM_152626,NM_000181	chr7,chr7	+,-	ZNF92,GUSB	-133509,474075
chr7:64602088-64603234	chr7	-	65018093	65019071	False	NM_000181,NR_027392	chr7,chr7	-,+	GUSB,INTS4L2	428280,93705
chr16:47490408-47491144	chr16	+	47490622	47490893	True	NM_030790,NM_000293,NM_001031835	chr16,chr16,chr16	-,+,+	ITFG1,PHKB,PHKB	4187,4316,4316
chr3:121902480-121902843	chr3	+	121902485	121902805	True	NM_000388,NM_001178065,NM_001199799	chr3,chr3,chr3	+,+,-	CASR,CASR,ILDR1	-6,375,-161358
chrX:55765300-55766474	chrX	+	55765493	55766458	True	NM_201286,NM_016656	chrX,chrX	-,+	USP51,RRAGB	-249862,-21434
chr1:219664746-219664946	chr1	+	219664765	219664931	True	NM_138794,NM_018713	chr1,chr1	+,-	LYPLAL1,SLC30A10	-317630,437112
chr7:57658028-57658739	chr7	+	57658125	57658602	True	NR_030766,NM_001159279	chr7,chr7	-,+	LOC642006,ZNF716	-410262,-148304
chr2:23609661-23609987	chr2	+	23609664	23610036	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	539948,-1417
chr11:61381484-61381844	chr11	+	61381667	61381737	True	NM_004200,NR_002775	chr11,chr11	-,+	SYT7,RPLP0P2	-33369,770
chr2:237411520-237412139	chr2	+	237411753	237412117	True	NM_020311,NM_024726	chr2,chr2	+,-	CXCR7,IQCA1	66262,4025
chrX:26210978-26211205	chrX	+	26210987	26211183	True	NM_139058,NM_173523	chrX,chrX	-,+	ARX,MAGEB6	-1176922,-481
chr22:35869091-35869867	chr22	+	35869190	35869914	True	NM_005368,NM_014310	chr22,chr22	-,+	MB,RASD2	143520,67437
chr15:75576726-75577084	chr15	+	75576897	75577103	True	NR_030360,NM_001145224	chr15,chr15	-,+	MIR631,GOLGA6D	68973,-1768
chr15:75576726-75577084	chr15	-	78217404	78217490	False	NM_001101404,NR_027024	chr15,chr15	+,-	SH2D7,LOC645752	167436,1750
chr15:75576726-75577084	chr15	+	72948759	72948965	False	NR_002780,NM_018652	chr15,chr15	-,+	HIGD2B,GOLGA6B	29575,-1774
chr15:75576726-75577084	chr15	-	74373021	74373169	False	NM_001130136,NM_001038640	chr15,chr15	+,-	ISLR2,GOLGA6A	48545,1774
chr15:75576726-75577084	chr15	+	75552620	75553028	False	NR_030360,NM_001164404	chr15,chr15	-,+	MIR631,GOLGA6C	93250,-1774
chr3:53289036-53289280	chr3	+	53289082	53289144	True	NM_001064,NM_001135055,NM_212539	chr3,chr3,chr3	-,-,+	TKT,TKT,PRKCD	1036,1036,-93910
chr14:51278120-51278634	chr14	+	51278120	51278228	True	NM_181533,NM_020921	chr14,chr14	+,-	ABHD12B,NIN	60649,19673
chr12:9102660-9103331	chr12	+	9102692	9103346	True	NM_004426,NM_002355	chr12,chr12	+,-	PHC1,M6PR	-35427,-440
chr15:34496067-34497240	chr15	+	34496264	34497068	True	NM_024713,NM_016454	chr15,chr15	-,+	C15orf29,TMEM85	5279,20176
chr19:4866188-4866481	chr19	+	4866328	4866478	True	NM_005817,NM_001048201,NM_001164189,NM_001164194	chr19,chr19,chr19,chr19	-,+,-,-	PLIN3,UHRF1,PLIN3,PLIN3	1352,43031,1352,1352
chr2:20648257-20648532	chr2	+	20648321	20648437	True	NM_015317,NM_004040	chr2,chr2	-,+	PUM2,RHOB	-121177,-1541
chr17:44336377-44337033	chr5	+	140050443	140050493	False	NM_017706,NM_194249	chr5,chr5	+,-	WDR55,DND1	-6110,2728
chr17:44336377-44337033	chr17_ctg5_hap1	-	529000	529458	False	NM_001193465,NR_034172	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	KIAA1267,LOC644246	34039,65978
chr17:44336377-44337033	chr17_ctg5_hap1	+	1423325	1423481	False	NR_002940,NM_016632	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LRRC37A4,ARL17A	57895,90453
chr17:44336377-44337033	chr17_ctg5_hap1	+	1203468	1203930	True	NR_026901,NR_037772	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LOC644172,CRHR1	-15080,-33015
chr17:44336377-44337033	chr17	+	44336479	44336941	False	NM_001193465,NM_014834	chr17,chr17	-,+	KIAA1267,LRRC37A	-33739,35555
chr16:67701462-67701793	chr16	+	67701474	67701840	True	NM_016948,NM_001082487,NM_001082486,NM_022914,NM_001012984,NM_032140,NM_001037281	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,-,+,-,+	PARD6A,ACD,ACD,ACD,C16orf86,C16orf48,PARD6A	-6674,-6756,-6756,-6756,-808,-846,-6674
chr1:28414414-28414996	chr1	+	28414593	28414889	True	NR_027268,NM_018053,NM_001990	chr1,chr1,chr1	-,+,-	LOC653566,XKR8,EYA3	8230,-128140,309
chr7:155252474-155252924	chr7	+	155252611	155252951	True	NM_001103176,NM_001427	chr7,chr7	-,+	CNPY1,EN2	73638,-1838
chr16:30065781-30066131	chr16	+	30065800	30066132	True	NM_001127617,NM_000034,NM_031478,NM_184043	chr16,chr16,chr16,chr16	+,+,-,+	ALDOA,ALDOA,FAM57B,ALDOA	9840,-1360,-23614,9467
chr15:80721751-80722663	chr15	+	80721897	80722535	True	NM_014862,NR_033833	chr15,chr15	+,-	ARNT2,LOC283688	-25256,-87750
chr3:93826424-93827600	chr3	+	93826500	93827196	True	NM_001195643,NM_022072	chr3,chr3	-,+	DHFRL1,NSUN3	-44433,-44700
chr4:673179-673814	chr4	+	673397	673753	True	NM_007100,NM_002477,NR_033743,NM_032219	chr4,chr4,chr4,chr4	-,+,-,-	ATP5I,MYL5,ATP5I,MFSD7	-5270,-1737,-5270,9270
chr19:14199936-14200240	chr19	+	14200057	14200241	True	NR_024282,NM_138352	chr19,chr19	+,-	LOC113230,SAMD1	-16287,1041
chr19:46801913-46802696	chr19	+	46801933	46802651	True	NM_152796,NM_152795,NM_022462,NM_152794,NM_032040	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	HIF3A,HIF3A,HIF3A,HIF3A,CCDC8	-351,-1681,-351,4204,114318
chr2:135016660-135016995	chr2	+	135016675	135017023	True	NM_002410,NM_030923	chr2,chr2	+,-	MGAT5,TMEM163	-4896,459598
chr3:142297782-142298957	chr3	+	142297798	142299002	True	NM_001184,NM_001145319	chr3,chr3	-,+	ATR,PLS1	-130,16226
chr15:35047465-35048072	chr15	+	35047528	35048013	True	NM_175741,NM_020660	chr15,chr15	+,-	C15orf55,GJD2	-409513,-839
chr4:56484560-56485353	chr4	+	56484644	56485332	True	NR_003935,NM_006681	chr4,chr4	+,-	LOC644145,NMU	200904,17183
chr4:42955365-42955996	chr4	+	42955368	42956010	True	NM_001080476,NM_006095	chr4,chr4	+,-	GRXCR1,ATP8A1	-60137,-296246
chr9:35813074-35813688	chr9	+	35813101	35813615	True	NM_016446,NM_001039592,NM_032593,NM_172312	chr9,chr9,chr9,chr9	+,-,-,-	TMEM8B,SPAG8,HINT2,SPAG8	15606,-842,1477,-842
chr17:46872610-46872960	chr17	+	46872856	46873000	True	NM_005831,NM_173623	chr17,chr17	+,-	CALCOCO2,TTLL6	35371,-1170
chr12:109490599-109490825	chr12	+	109490657	109490779	True	NM_032663,NM_018711	chr12,chr12	+,-	USP30,SVOP	-328,-31812
chr9:90555880-90556695	chr9	+	90556133	90556642	True	NM_001145124,NM_001039803	chr9,chr9	+,-	FAM75C1,CDK20	-23313,33110
chr9:90555880-90556695	chr9	-	90726229	90726619	False	NM_001145124,NM_001166137	chr9,chr9	+,-	FAM75C1,FAM75C2	-193413,23338
chr2:99755648-99757370	chr2	+	99755908	99757256	True	NM_182911,NM_144706	chr2,chr2	-,+	TSGA10,C2orf15	831,928
chr2:223737001-223738830	chr2	+	223737249	223738732	True	NM_005687,NM_203372	chr2,chr2	-,+	FARSB,ACSL3	-216422,-11568
chr16:694733-695049	chr16	+	694749	694955	True	NM_001040165,NM_001040160,NM_001040161,NM_001040162,NM_138418,NM_145294,NM_032366	chr16,chr16,chr16,chr16,chr16,chr16,chr16	-,-,-,-,+,+,-	C16orf13,C16orf13,C16orf13,C16orf13,FAM195A,WDR90,C16orf13	-8402,-8402,-8402,-8402,-2951,4407,-8402
chr1:38230419-38230690	chr1	+	38230452	38230704	True	NM_001031740,NM_001099439,NM_173641	chr1,chr1,chr1	+,-,-	MANEAL,EPHA10,EPHA10	29069,170,170
chr10:111768421-111768860	chr10	+	111768467	111768897	True	NM_001121,NM_019903,NR_030724,NM_016824	chr10,chr10,chr10,chr10	+,+,-,+	ADD3,ADD3,XPNPEP1,ADD3	-807,-2792,-85156,-807
chr2:128404630-128404919	chr2	+	128404703	128404883	True	NM_005291,NM_001161416,NR_027823,NM_001161417,NM_001161415	chr2,chr2,chr2,chr2,chr2	+,+,-,+,+	GPR17,GPR17,LIMS2,GPR17,GPR17	-1315,-1315,920,-1315,-1315
chr7:74349603-74350211	chr7	+	74349775	74350031	True	NM_001025202,NM_001145063	chr7,chr7	-,+	STAG3L2,GATSL1	-43044,29051
chr7:74349603-74350211	chr7	+	72540317	72540573	False	NR_003664,NR_003580	chr7,chr7	-,+	SPDYE8P,LOC100093631	-40008,28438
chr7:74349603-74350211	chr7	-	74682054	74682310	False	NM_001003795,NR_003580	chr7,chr7	+,-	GTF2IRD2B,LOC100093631	-173770,-28595
chr7:74349603-74350211	chr7	-	74896307	74896563	False	NM_001145064,NR_003664	chr7,chr7	-,+	GATSL2,SPDYE8P	-28966,39969
chr16:87903535-87903756	chr16	+	87903667	87903781	True	NM_001173539,NM_003486	chr16,chr16	+,-	BANP,SLC7A5	81256,-567
chr16:87903535-87903756	chr16	+	21532354	21532404	False	NM_001077180,NR_002594	chr16,chr16	+,-	METTL9,SLC7A5P2	78451,-589
chr16:87903535-87903756	chr16	+	29625622	29625672	False	NR_002593,NM_001030288	chr16,chr16	-,+	SLC7A5P1,SPN	-584,48627
chr19:1038729-1038945	chr19	+	1038895	1038959	True	NM_033420,NM_019112	chr19,chr19	-,+	C19orf6,ABCA7	-17754,1142
chr17:7155366-7155620	chr17	+	7155366	7155468	True	NM_015343,NM_007278,NM_203415,NM_203414,NM_203413,NM_015362,NM_001143775	chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,+,+,+,-	CTDNEP1,GABARAP,C17orf81,C17orf81,C17orf81,C17orf81,CTDNEP1	-107,-9613,-45,82,82,82,-371
chr12:107167541-107167912	chr12	+	107167552	107167874	True	NM_001033050,NM_018157	chr12,chr12	-,+	MTERFD3,RIC8B	213105,524
chr9:100396294-100396651	chr9	+	100396329	100396681	True	NM_139246,NM_002486	chr9,chr9	-,+	TSTD2,NCBP1	-367,-675
chr5:38450988-38451812	chr5	+	38451025	38451639	True	NM_001127671,NM_182801	chr5,chr5	-,+	LIFR,EGFLAM	105159,-5441
chr16:4675711-4675957	chr16	+	4675759	4675945	True	NM_001142289,NM_001142291,NM_001142290,NM_015246,NM_145253	chr16,chr16,chr16,chr16,chr16	+,+,+,+,-	MGRN1,MGRN1,MGRN1,MGRN1,FAM100A	-984,-984,-984,-984,-10832
chr17:79847777-79848411	chr17	+	79847800	79848311	True	NM_016476,NM_005782,NM_001002249,NM_001002248,NM_001002247,NM_001002246,NM_001002245,NM_001002244	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,-,+,+,+,+,+,+	ANAPC11,THOC4,ANAPC11,ANAPC11,ANAPC11,ANAPC11,ANAPC11,ANAPC11	1287,1202,1506,1287,1287,1287,1287,1287
chr10:97799646-97800456	chr10	+	97799721	97800514	True	NM_001134375,NM_019084,NR_036113,NM_001134376	chr10,chr10,chr10,chr10	+,+,-,+	CCNJ,CCNJ,MIR3157,CCNJ	2644,2644,23704,2644
chr10:93683827-93684560	chr10	+	93683861	93684608	True	NM_152429,NM_003972	chr10,chr10	-,+	FGFBP3,BTAF1	-14603,-176
chr11:368597-368863	chr11	+	368690	368894	True	NM_178537,NM_001135054	chr11,chr11	+,-	B4GALNT4,SIGIRR	900,46155
chr12:6560534-6560979	chr12	+	6560675	6560865	True	NM_001242,NM_018009,NR_015382	chr12,chr12,chr12	+,+,-	CD27,TAPBPL,LOC678655	-6675,311,0
chr14:105287520-105287868	chr14	+	105287522	105287854	True	NR_024396,NM_001014432	chr14,chr14	+,-	MGC23270,AKT1	-35,-25442
chrX:154034089-154034328	chrX	+	154034106	154034371	True	NM_001166462,NR_002984,NM_001166460,NM_001166461,NM_002436	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	MPP1,SNORA56,MPP1,MPP1,MPP1	-304,-30884,-304,-304,-304
chr4:37255067-37256898	chr4	+	37255176	37256927	True	NM_001085399,NM_001144990	chr4,chr4	-,+	RELL1,KIAA1239	431123,-8537
chr1:157069323-157069609	chr1	+	157069582	157069658	True	NM_001004341,NR_001560	chr1,chr1	-,+	ETV3L,CYCSP52	2,28495
chr4:155471790-155472673	chr4	+	155471818	155472445	True	NM_002669,NM_001201564,NM_001184741	chr4,chr4,chr4	-,-,+	PLRG1,PLRG1,FGB	-233,-233,11686
chr5:64859351-64860245	chr5	+	64859360	64859951	True	NM_015342,NM_022145	chr5,chr5	+,-	PPWD1,CENPK	-280,-365
chr10:101374968-101375223	chr10	+	101375130	101375262	True	NM_020354,NM_031212	chr10,chr10	+,-	ENTPD7,SLC25A28	44000,5009
chr5:140683706-140683930	chr5	+	140683737	140683959	True	NM_031947,NM_031993	chr5,chr5	-,+	SLC25A2,PCDHGA1	-125,26292
chr14:57075921-57077049	chr14	+	57076009	57076927	True	NM_017799,NM_172337	chr14,chr14	+,-	C14orf101,OTX2	-29551,195474
chr3:44037272-44037586	chr3	+	44037354	44037598	True	NM_001204834,NR_029700	chr3,chr3	-,+	ANO10,MIR138-1	-373794,118105
chr1:226250163-226250538	chr1	+	226250173	226250445	True	NM_152608,NM_002107,NR_002315	chr1,chr1,chr1	-,+,+	C1orf55,H3F3A,LOC440926	-63107,34,-16
chr16:219983-220188	chr16	+	220007	220237	True	NM_000558,NM_000517,NM_001003938,NM_001077350	chr16,chr16,chr16,chr16	+,+,+,-	HBA1,HBA2,HBM,NPRL3	6441,2608,-4085,-31335
chr16:219983-220188	chr16	+	224264	224493	False	NM_001077350,NM_000558,NM_000517,NM_001003938,NM_005331	chr16,chr16,chr16,chr16,chr16	-,+,+,+,+	NPRL3,HBA1,HBA2,HBM,HBQ1	-35592,2185,-1469,-8342,5839
chr7:105517294-105517776	chr7	+	105517374	105517731	True	NM_020725,NM_152750,NM_152749	chr7,chr7,chr7	-,+,-	ATXN7L1,CDHR3,ATXN7L1	-343,85925,-343
chr22:32750547-32752413	chr22	+	32750704	32752290	True	NM_006604,NR_001450,NM_001098535	chr22,chr22,chr22	+,-,+	RFPL3,RFPL3S,RFPL3	117,14732,1563
chr1:74721945-74723443	chr1	+	74722318	74723348	True	NM_015978,NM_001105659	chr1,chr1	+,-	TNNI3K,LRRIQ3	-21311,-58447
chr6:97699881-97701426	chr6	+	97699979	97701338	True	NM_052904,NM_198468	chr6,chr6	+,-	KLHL32,MMS22L	-327541,29770
chr7:4899363-4900823	chr7	+	4899782	4900861	True	NM_020144,NM_014855	chr7,chr7	-,+	PAPOLB,KIAA0415	821,-84571
chr1:225126723-225127092	chr1	+	225126975	225127035	True	NM_144989,NM_001145154,NM_002296,NM_001373	chr1,chr1,chr1,chr1	+,+,-,+	DNAH14,DNAH14,LBR,DNAH14	-9671,-9678,488830,-9678
chrX:1331307-1332692	chrY	+	1281379	1281775	False	NM_022148,NM_001161531,NM_001012288	chrY,chrY,chrY	-,+,-	CRLF2,CSF2RA,CRLF2	-15,55917,-18
chrX:1331307-1332692	chrX	+	1331379	1331775	True	NM_022148,NM_001161531,NM_001012288	chrX,chrX,chrX	-,+,-	CRLF2,CSF2RA,CRLF2	-15,55917,-18
chr6:3752579-3752903	chr6	+	3752734	3752854	True	NM_183373,NM_012135	chr6,chr6	-,+	C6orf145,FAM50B	-488,96777
chrX:40437113-40438105	chrX	+	40437423	40438014	True	NM_005765,NM_144970	chrX,chrX	+,-	ATP6AP2,CXorf38	2201,68855
chr3:142464340-142464690	chr3	+	142464496	142464600	True	NM_003304,NM_013363	chr3,chr3	+,-	TRPC1,PCOLCE2	-21285,143503
chr5:74053756-74054693	chr5	+	74054138	74054710	True	NM_014886,NM_032380,NM_170681,NM_170691	chr5,chr5,chr5,chr5	+,-,-,-	NSA2,GFM2,GFM2,GFM2	8392,8390,8390,8390
chr22:29466092-29467067	chr22	+	29466285	29467081	True	NM_015370,NM_032045,NM_001039570	chr22,chr22,chr22	-,+,+	C22orf31,KREMEN1,KREMEN1	-8378,1984,1984
chr1:65614862-65615245	chr1	+	65614865	65615279	True	NM_203464,NM_001005353,NM_013410,NR_029516	chr1,chr1,chr1,chr1	+,+,+,-	AK4,AK4,AK4,MIR101-1	-1684,-1403,-1066,-90674
chr2:26788117-26788688	chr2	+	26788312	26788689	True	NM_001105519,NM_194248	chr2,chr2	+,-	C2orf70,OTOF	-2882,-6746
chr9:34050308-34050580	chr9	+	34050358	34050590	True	NM_018449,NR_003690	chr9,chr9	-,+	UBAP2,SNORD121B	-1411,-116129
chr9:132565848-132566663	chr9	+	132565852	132566652	True	NM_000113,NM_014506	chr9,chr9	-,+	TOR1A,TOR1B	19839,-471
chr16:5147040-5147249	chr16	+	5147158	5147292	True	NM_019109,NM_201400,NM_201598	chr16,chr16,chr16	+,-,-	ALG1,FAM86A,FAM86A	-25399,547,547
chr5:112634705-112636464	chr5	+	112635209	112636362	True	NM_002387,NM_022828	chr5,chr5	-,+	MCC,YTHDC2	-4597,213028
chr6:31785382-31785595	chr6_qbl_hap6	+	3079106	3079299	False	NM_005346,NM_005345,NM_005527	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	+,+,-	HSPA1B,HSPA1A,HSPA1L	9863,-2222,-2624
chr6:31785382-31785595	chr6_dbb_hap3	+	3071046	3071239	False	NM_005346,NM_005345,NM_005527	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	+,+,-	HSPA1B,HSPA1A,HSPA1L	9859,-2222,-2624
chr6:31785382-31785595	chr6	+	31785459	31785652	True	NM_005346,NM_005345,NM_005527	chr6,chr6,chr6	+,+,-	HSPA1B,HSPA1A,HSPA1L	9859,-2222,-2624
chr6:31785382-31785595	chr6_apd_hap1	+	3100220	3100413	False	NM_005346,NM_005345,NM_005527	chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1	+,+,-	HSPA1B,HSPA1A,HSPA1L	9862,-2222,-2624
chr6:31785382-31785595	chr6_cox_hap2	+	3295039	3295232	False	NM_005346,NM_005345,NM_005527	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,+,-	HSPA1B,HSPA1A,HSPA1L	9861,-2222,-2624
chr22:43010994-43011583	chr22	+	43011030	43011626	True	NM_178136,NM_032311,NR_029422	chr22,chr22,chr22	-,-,+	POLDIP3,POLDIP3,RNU12	-68,-68,43
chr9:113438693-113440551	chr9	+	113438757	113440129	True	NM_153366,NM_005592,NM_001166280,NM_001166281	chr9,chr9,chr9,chr9	-,+,+,+	SVEP1,MUSK,MUSK,MUSK	-96597,-7757,-7757,-7757
chr1:203733576-203733969	chr1	+	203733634	203734000	True	NM_017773,NR_027902,NM_001136190	chr1,chr1,chr1	+,-,+	LAX1,C1orf157,LAX1	283,276442,283
chr7:129010461-129011260	chr7	+	129010687	129011237	True	NM_001130722,NM_001130723,NR_034053	chr7,chr7,chr7	+,+,-	AHCYL2,AHCYL2,TNPO3	4246,-2782,-315460
chr6:13488011-13488222	chr6	+	13488116	13488270	True	NM_033069,NM_018988,NM_031244	chr6,chr6,chr6	-,-,+	C6orf114,GFOD1,SIRT5	-1701,-329,86521
chr16:67996276-67997230	chr16	+	67996375	67997119	True	NM_001145961,NM_001145962,NM_001145963,NM_001145964,NM_005072,NM_017803	chr16,chr16,chr16,chr16,chr16,chr16	-,-,-,-,-,+	SLC12A4,SLC12A4,SLC12A4,SLC12A4,SLC12A4,DUS2L	5528,5528,899,3712,5528,60084
chr22:19701173-19701398	chr22	+	19701174	19701442	True	NM_024627,NM_001009939,NM_002688,NR_037611,NR_037612,NM_000407	chr22,chr22,chr22,chr22,chr22,chr22	-,+,+,+,+,+	C22orf29,SEPT5,SEPT5,SEPT5-GP1BB,SEPT5-GP1BB,GP1BB	140979,4515,544,3300,4549,9623
chr22:43012410-43012657	chr22	+	43012416	43012580	True	NM_178136,NR_029422,NM_032311	chr22,chr22,chr22	-,+,-	POLDIP3,RNU12,POLDIP3	-1454,-1216,-1454
chr19:50554707-50554910	chr19	+	50554842	50554914	True	NM_016440,NR_027257	chr19,chr19	-,+	VRK3,FLJ26850	-26037,-969
chr2:234981357-234982998	chr2	+	234981359	234983017	True	NM_006944,NR_024322	chr2,chr2	+,-	SPP2,MSL3P1	-22064,-204304
chr7:76680893-76681188	chr7	+	76681087	76681165	True	NM_006682,NR_028058	chr7,chr7	-,+	FGL2,LOC100132832	148035,-12341
chr5:70391187-70392580	chr5	+	70391374	70392130	True	NM_022877,NR_026578	chr5,chr5	+,-	SMN2,LOC647859	-170670,-2477
chr5:70391187-70392580	chr5	+	69383142	69383903	False	NM_022877,NR_024054	chr5,chr5	+,-	SMN2,LOC100170939	-37856,137769
chr5:70391187-70392580	chr5	+	70258596	70259357	False	NM_022877,NM_004536	chr5,chr5	+,-	SMN2,NAIP	-37892,61634
chr12:12716727-12717576	chr12	+	12716769	12717398	True	NM_001310,NM_030640	chr12,chr12	+,-	CREBL2,DUSP16	47432,-1321
chr9:117917598-117918244	chr9	+	117917666	117918115	True	NM_017418,NM_002160	chr9,chr9	+,-	DEC1,TNC	-13620,-37180
chr7:63694487-63695509	chr7	+	63694561	63695109	True	NM_178558,NM_153363	chr7,chr7	-,+	ZNF680,ZNF679	328446,-5760
chr2:27340667-27341143	chr2	+	27341026	27341192	True	NM_032604,NM_001166239,NM_006569,NM_001166240,NM_001166241	chr2,chr2,chr2,chr2,chr2	+,-,-,-,-	ABHD1,CGREF1,CGREF1,CGREF1,CGREF1	5464,631,853,853,-7056
chr1:157971484-157972139	chr1	+	157971544	157972168	True	NM_018240,NR_033946	chr1,chr1	+,-	KIRREL,LOC646268	-8532,138312
chr5:177543942-177544795	chr5	+	177544230	177544767	True	NM_015111,NM_001034833	chr5,chr5	+,-	N4BP3,NHP2	-3725,36244
chr6:35992407-35992689	chr6	+	35992560	35992708	True	NM_052961,NM_001193476,NM_001315,NM_139014,NM_139013,NM_139012,NM_138718	chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,-,+,+,+,+,-	SLC26A8,SLC26A8,MAPK14,MAPK14,MAPK14,MAPK14,SLC26A8	-147,-255,2745,2745,2745,2745,-283
chr14:100115986-100116234	chr14	+	100116148	100116278	True	NM_032425,NM_001127258,NM_001144995	chr14,chr14,chr14	+,+,-	HHIPL1,HHIPL1,CCDC85C	-4723,-4723,-45421
chr12:124116922-124117213	chr12	+	124116932	124117183	True	NM_001414,NM_001516	chr12,chr12	-,+	EIF2B1,GTF2H3	1202,1197
chr13:70642395-70644020	chr13	+	70642709	70643765	True	NR_002717,NM_020866	chr13,chr13	+,-	ATXN8OS,KLHL1	37579,38924
chr1:156562759-156563763	chr1	+	156562772	156563565	True	NM_144772,NM_182679,NM_015590	chr1,chr1,chr1	+,-,-	APOA1BP,GPATCH4,GPATCH4	-1265,7764,7764
chrX:53483351-53484650	chrX	+	53483437	53484510	True	NM_001031745,NM_004493	chrX,chrX	+,-	RIBC1,HSD17B10	-33606,-22114
chr8:25043258-25043935	chr8	+	25043340	25043850	True	NM_024940,NM_006158	chr8,chr8	+,-	DOCK5,NEFL	-1104,-229209
chrX:130016762-130017243	chrX	+	130016808	130017045	True	NM_144967,NM_006375	chrX,chrX	+,-	ARHGAP36,ENOX2	175170,20226
chr17:37325669-37326423	chr17	+	37325760	37326120	True	NM_000981,NM_001143968	chr17,chr17	+,-	RPL19,ARL5C	30415,-3346
chr1:87381484-87382971	chr1	+	87381551	87382898	True	NM_001134492,NM_004261,NM_012262,NM_203341	chr1,chr1,chr1,chr1	+,-,+,-	HS2ST1,SEP15,HS2ST1,SEP15	-1267,-1444,-1267,-1444
chr15:67835828-67836049	chr15	+	67835855	67836001	True	NM_002757,NM_145160,NM_024666	chr15,chr15,chr15	+,+,-	MAP2K5,MAP2K5,AAGAB	-885,-885,-288781
chr14:91881986-91883329	chr14	+	91882212	91883149	True	NM_001080414,NR_003709	chr14,chr14	-,+	CCDC88C,SNORA11B	1035,-289494
chr22:29457345-29457656	chr22	+	29457540	29457692	True	NM_001039570,NM_015370	chr22,chr22	+,-	KREMEN1,C22orf31	11373,265
chr11:118305017-118305693	chr11	+	118305030	118305646	True	NM_001197104,NM_005933,NM_001040651	chr11,chr11,chr11	+,+,-	MLL,MLL,CD3D	1558,1558,-91571
chr2:33168722-33169405	chr2	+	33169053	33169347	True	NM_206943,NM_015475	chr2,chr2	+,-	LTBP1,FAM98A	3021,655067
chr5:172411567-172412102	chr5	+	172411566	172411914	True	NR_026682,NM_003945	chr5,chr5	-,+	LOC100268168,ATP6V0E1	-25195,-864
chr17:16475332-16476556	chr17	+	16475504	16476282	True	NM_014695,NM_020653	chr17,chr17	+,-	CCDC144A,ZNF287	117356,-2984
chr12:76651590-76652466	chr12	+	76651922	76652244	True	NM_015336,NM_024685	chr12,chr12	+,-	ZDHHC17,BBS10	505609,90028
chr8:91030205-91030676	chr8	+	91030482	91030685	True	NM_002485,NM_001359	chr8,chr8	-,+	NBN,DECR1	-33583,-16959
chr1:163296769-163298656	chr1	+	163297001	163298694	True	NM_003617,NM_145697,NM_031423	chr1,chr1,chr1	-,+,+	RGS5,NUF2,NUF2	-124038,-5330,-5330
chr3:127677793-127678283	chr3	+	127677800	127678215	True	NM_001003794,NM_207335	chr3,chr3	-,+	MGLL,KBTBD12	-135749,-35949
chr3:182879420-182879778	chr3	+	182879504	182879824	True	NM_032047,NM_014398	chr3,chr3	+,-	B3GNT5,LAMP3	91207,893
chr7:149473670-149473904	chr7	+	149473695	149473835	True	NM_207336,NM_198455	chr7,chr7	-,+	ZNF467,SSPO	-3400,-615
chr19:56741746-56743503	chr19	+	56741783	56743135	True	NM_024303,NM_033106	chr19,chr19	-,+	ZSCAN5A,GALP	-2124,-54445
chr15:80353270-80354105	chr15	+	80353290	80354135	True	NM_004049,NM_019006	chr15,chr15	-,+	BCL2A1,ZFAND6	-89647,-1325
chr19:45825283-45826411	chr19	+	45825577	45826459	True	NM_001824,NM_177417	chr19,chr19	-,+	CKM,KLC3	-176,17538
chr5:148786300-148787225	chr5	+	148786806	148787101	True	NR_027180,NM_014443	chr5,chr5	+,-	LOC728264,IL17B	-417,-27968
chr2:54199666-54200460	chr2	+	54199752	54200362	True	NM_014614,NM_138448	chr2,chr2	-,+	PSME4,ACYP2	-1775,142047
chr1:150952794-150953214	chr1	+	150952905	150952982	True	NM_003568,NM_022075,NM_181746	chr1,chr1,chr1	+,-,-	ANXA9,LASS2,LASS2	1516,-5465,-5465
chr3:129042426-129042912	chr3	+	129042435	129042909	True	NM_006026,NR_026991	chr3,chr3	-,+	H1FX,C3orf47	-7315,-7372
chr22:20117352-20118252	chr22	+	20117356	20118242	True	NM_001185024,NM_013373,NM_182984	chr22,chr22,chr22	+,+,-	ZDHHC8,ZDHHC8,TRMT2A	1121,1121,-12588
chr13:99174565-99175215	chr13	+	99174600	99175252	True	NM_003576,NR_036129	chr13,chr13	-,+	STK24,MIR3170	-259,-313873
chr3:184083686-184084216	chr3	+	184083797	184084128	True	NM_004366,NM_001171088,NM_001171087,NM_006232,NM_001171089	chr3,chr3,chr3,chr3,chr3	-,-,-,+,-	CLCN2,CLCN2,CLCN2,POLR2H,CLCN2	-4406,-4406,-4406,-2662,-4406
chr2:112814139-112815495	chr2	+	112814293	112815318	True	NM_022662,NM_032824	chr2,chr2	-,+	ANAPC1,TMEM87B	-172552,-1544
chr15:83622256-83622489	chr15	+	83622256	83622330	True	NM_031452,NM_004839,NM_199330,NM_199331,NM_199332	chr15,chr15,chr15,chr15,chr15	+,-,-,-,-	FAM103A1,HOMER2,HOMER2,HOMER2,HOMER2	32664,-783,-783,-783,-783
chr1:25559077-25559343	chr1	+	25559076	25559230	True	NM_001127691,NM_207170,NM_015484	chr1,chr1,chr1	+,-,-	RHD,SYF2,SYF2	39750,-63,-63
chr19:634764-635451	chr19	+	634947	635483	True	NM_005035,NM_020637	chr19,chr19	-,+	POLRMT,FGF22	-1379,4442
chr20:36795337-36796610	chr20	+	36795464	36796594	True	NM_004613,NM_021215,NM_198951	chr20,chr20,chr20	-,+,-	TGM2,RPRD1B,TGM2	-1764,-133567,-1764
chr16:20697940-20699121	chr16	+	20698152	20698936	True	NM_202000,NM_052956	chr16,chr16	+,-	ACSM3,ACSM1	76375,3700
chr17:72464015-72464562	chr17	+	72464032	72464143	True	NM_174892,NM_007261	chr17,chr17	-,+	CD300LB,CD300A	63529,-1561
chr20:10655122-10655383	chr20	+	10655123	10655379	True	NM_001009608,NM_000214	chr20,chr20	+,-	C20orf94,JAG1	-239223,-429
chr2:46874564-46875614	chr2	+	46874701	46875586	True	NM_173074,NM_014171	chr2,chr2	-,+	PIGF,CRIPT	-30450,-30434
chr20:23971130-23971402	chr20	+	23971215	23971343	True	NM_178312,NM_178311,NR_001279	chr20,chr20,chr20	-,-,+	GGTLC1,GGTLC1,CSTT	-3703,-1799,-471483
chr2:178063332-178064301	chr2	+	178064067	178064317	True	NM_194247,NR_036075	chr2,chr2	+,-	HNRNPA3,MIR3128	13104,56471
chr3:32149881-32150634	chr3	+	32149946	32150680	True	NM_017784,NM_015141	chr3,chr3	-,+	OSBPL10,GPD1L	-126604,-1994
chr5:150459039-150460161	chr5	+	150459308	150460130	True	NM_002084,NM_006058	chr5,chr5	+,-	GPX3,TNIP1	-59365,917
chr6:134627483-134629246	chr6	+	134627580	134629012	True	NM_004865,NM_001143676	chr6,chr6	+,-	TBPL1,SGK1	-353330,10248
chr12:10960557-10961292	chr12	+	10960746	10961312	True	NM_023918,NM_023919,NM_023917,NM_005042	chr12,chr12,chr12,chr12	-,-,-,+	TAS2R8,TAS2R7,TAS2R9,PRH2	-1167,-5520,1505,120521
chr1:165551185-165551437	chr1	+	165551190	165551480	True	NR_026744,NM_001005214	chr1,chr1	-,+	LOC400794,LRRC52	-5,-37763
chr1:149194795-149195520	chr1	+	149194808	149195542	True	NM_001024599,NR_027002	chr1,chr1	-,+	HIST2H2BF,LOC388692	203742,83933
chr7:45928696-45929022	chr7	+	45928767	45929057	True	NM_000596,NM_000598	chr7,chr7	+,-	IGFBP1,IGFBP3	-859,31864
chr13:58205109-58206029	chr13	+	58205187	58206020	True	NM_001040429,NM_030932	chr13,chr13	+,-	PCDH17,DIAPH3	51,2381373
chr2:11887652-11888472	chr2	+	11887656	11888464	True	NM_012344,NM_145693	chr2,chr2	-,+	NTSR2,LPIN1	-77327,-970
chr17:3499857-3500135	chr17	+	3499988	3500184	True	NM_080705,NM_080706,NM_018727,NM_001031681	chr17,chr17,chr17,chr17	-,-,-,+	TRPV1,TRPV1,TRPV1,CTNS	-863,-3817,202,39577
chr15:65672628-65673102	chr15	+	65672636	65673103	True	NM_004884,NM_016395	chr15,chr15	-,+	IGDCC3,PTPLAD1	-2258,149723
chr15:99789537-99789748	chr15	+	99789551	99789775	True	NM_001040658,NM_001040659,NM_001040656,NM_001040657,NM_001040660,NM_144598,NM_022905,NM_001040655	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,-,-,-,+,-,-	TTC23,TTC23,TTC23,TTC23,TTC23,LRRC28,TTC23,TTC23	90,90,90,90,90,1876,90,90
chr10:43247942-43248301	chr10	+	43247988	43248154	True	NM_014753,NM_006955	chr10,chr10	+,-	BMS1,ZNF33B	29799,-113996
chr1:55464597-55464823	chr1	+	55464699	55464815	True	NM_057176,NM_014762	chr1,chr1	+,-	BSND,DHCR24	-133,-111778
chr3:113681644-113681963	chr3	+	113681684	113681986	True	NM_173570,NM_020817	chr3,chr3	+,-	ZDHHC23,KIAA1407	-14997,93524
chr19:58427419-58427643	chr19	+	58427449	58427517	True	NM_032828,NM_152475	chr19,chr19	+,-	ZNF587,ZNF417	-66319,511
chr4:87770100-87770574	chr4	+	87770143	87770599	True	NM_001166693,NM_197965	chr4,chr4	+,-	AFF1,SLC10A6	85554,51
chr2:65659571-65659844	chr2	+	65659621	65659761	True	NM_181784,NM_005722	chr2,chr2	-,+	SPRED2,ACTR2	23,-204843
chr11:104948314-104948693	chr11	+	104948388	104948510	True	NM_001077244,NM_001223	chr11,chr11	+,-	GRIA4,CASP1	532289,23706
chr4:151938517-151939423	chr4	+	151938889	151939388	True	NM_006726,NM_001006,NM_001199282	chr4,chr4,chr4	-,+,-	LRBA,RPS3A,LRBA	-2240,81365,-2453
chr18:158874-159349	chr18	+	158957	159326	True	NM_005131,NM_005151,NM_001037334	chr18,chr18,chr18	-,+,+	THOC1,USP14,USP14	108784,-525,-525
chr19:4910576-4910796	chr19	+	4910660	4910733	True	NM_001080523,NM_001048201,NM_013282	chr19,chr19,chr19	-,+,+	ARRDC5,UHRF1,UHRF1	-7781,-1207,-151
chr7:133988997-133989793	chr7	+	133989258	133989635	True	NM_144648,NM_032826	chr7,chr7	+,-	LRGUK,SLC35B4	-177213,12243
chr4:141073289-141073556	chr4	+	141073374	141073574	True	NM_018717,NM_032547	chr4,chr4	-,+	MAML3,SCOC	1709,104865
chr22:24999186-24999851	chr22	+	24999454	24999696	True	NM_005265,NM_207644,NM_001032365,NM_001032364	chr22,chr22,chr22,chr22	+,-,+,+	GGT1,C22orf36,GGT1,GGT1	-325,-10419,3929,-381
chr1:20835688-20836296	chr1	+	20835866	20836346	True	NM_024544,NM_207334	chr1,chr1	-,+	MUL1,FAM43B	-1192,42585
chr4:1284729-1285531	chr4	+	1284734	1285584	True	NM_001328,NM_001017405,NM_005882	chr4,chr4,chr4	-,+,+	CTBP1,MAEA,MAEA	-41826,-1113,-1113
chr1:168101748-168102141	chr1	+	168101876	168101968	True	NM_153832,NM_001031800	chr1,chr1	-,+	GPR161,TIPRL	3712,46202
chr6:48021450-48022413	chr6	+	48021450	48022098	True	NR_033806,NM_001013732	chr6,chr6	+,-	OPN5,C6orf138	-266707,14383
chrX:14048970-14049288	chrX	+	14048977	14049314	True	NM_001042480,NM_003611,NM_001042479,NM_017856	chrX,chrX,chrX,chrX	-,+,-,-	GEMIN8,OFD1,GEMIN8,GEMIN8	-942,-296196,-942,-942
chr15:75199324-75200359	chr15	+	75199358	75200340	True	NM_002435,NM_020447	chr15,chr15	+,-	MPI,C15orf17	-17002,-82
chrX:1400568-1400808	chrY	+	1350595	1350686	False	NM_022148,NM_172247,NM_001161530	chrY,chrY,chrY	-,+,+	CRLF2,CSF2RA,CSF2RA	-69065,884,884
chrX:1400568-1400808	chrX	+	1400595	1400686	True	NM_022148,NM_172247,NM_001161530	chrX,chrX,chrX	-,+,+	CRLF2,CSF2RA,CSF2RA	-69065,884,884
chr12:91348389-91348827	chr12	+	91348531	91348749	True	NM_152638,NR_028138	chr12,chr12	-,+	C12orf12,LOC338758	254,-1245850
chr4:61153-61363	chr4	+	61314	61417	True	NM_182524,NM_001039127,NM_001137608	chr4,chr4,chr4	+,+,-	ZNF595,ZNF718,ZNF732	-8138,-8088,228582
chr2:206547521-206547785	chr2	+	206547531	206547808	True	NM_201266,NM_201267,NM_201264,NM_201279,NM_003872,NM_018534,NM_017759	chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,+,+,-	NRP2,NRP2,NRP2,NRP2,NRP2,NRP2,INO80D	-358,-358,-358,-358,-358,-358,403148
chr12:48551328-48552004	chr12	+	48551333	48552023	True	NM_024095,NM_001013635	chr12,chr12	-,+	ASB8,C12orf68	44,25342
chr2:152955373-152955627	chr2	+	152955493	152955569	True	NM_000726,NM_001005746,NM_052905,NM_001145798	chr2,chr2,chr2,chr2	-,-,+,-	CACNB4,CACNB4,FMNL2,CACNB4	74,-258,236181,74
chr19:1903655-1904370	chr19	+	1903900	1904386	True	NM_079834,NM_031213,NM_138422	chr19,chr19,chr19	+,-,+	SCAMP4,FAM108A1,ADAT3	986,-18382,1030
chr7:49814285-49814712	chr7	+	49814352	49814754	True	NM_001159878,NM_198570	chr7,chr7	-,+	ZPBP,VWC2	318156,-1146
chr12:19365506-19365797	chr12	+	19365643	19365846	True	NM_019012,NM_033123	chr12,chr12	+,-	PLEKHA5,PLCZ1	-83085,-474725
chr15:81665025-81666376	chr15	+	81665077	81666419	True	NM_001080532,NM_004513	chr15,chr15	-,+	TMC3,IL16	49,-75881
chr5:138940074-138940396	chr5	+	138940252	138940386	True	NM_003339,NM_181838,NM_198282	chr5,chr5,chr5	+,+,-	UBE2D2,UBE2D2,TMEM173	364,364,-77909
chr1:209886248-209888109	chr1	+	209886515	209888111	True	NM_005525,NM_000228	chr1,chr1	+,-	HSD11B1,LAMB3	-8380,-60695
chr6:109420911-109421597	chr6	+	109421064	109421364	True	NM_014454,NM_001083535	chr6,chr6	-,+	SESN1,CEP57L1	-5356,-4759
chr7:12678620-12680105	chr7	+	12679032	12680146	True	NM_001037164,NM_001135924	chr7,chr7	+,-	ARL4A,VWDE	46305,-235180
chr1:43426132-43426660	chr1	+	43426259	43426701	True	NR_033967,NM_006516	chr1,chr1	+,-	FLJ32224,SLC2A1	-1590,-1412
chr6:43597649-43597885	chr6	+	43597753	43597815	True	NM_014628,NM_001003690,NM_019096	chr6,chr6,chr6	+,+,-	MAD2L1BP,MAD2L1BP,GTPBP2	5761,-528,-817
chr4:6989788-6991092	chr4	+	6989956	6991077	True	NM_153376,NM_001113363	chr4,chr4	-,+	CCDC96,TBC1D14	53702,-1118
chr16:85615275-85616069	chr16	+	85615285	85615911	True	NM_001134473,NM_016095	chr16,chr16	+,-	KIAA0182,GINS2	29117,106727
chr12:76692553-76693894	chr12	+	76692886	76693882	True	NM_015336,NM_024685	chr12,chr12	+,-	ZDHHC17,BBS10	463971,48390
chr15:83849682-83850386	chr15	+	83849708	83850222	True	NM_016073,NM_023003	chr15,chr15	-,+	HDGFRP3,TM6SF1	26155,-73444
chr6:151191969-151193104	chr6	+	151192329	151192636	True	NM_020861,NM_015440	chr6,chr6	-,+	ZBTB2,MTHFD1L	520098,-5699
chr19:2736863-2738051	chr19	+	2736911	2737801	True	NM_003249,NM_213568,NM_144564	chr19,chr19,chr19	+,-,-	THOP1,SLC39A3,SLC39A3	47704,2337,2337
chr1:152798910-152799136	chr1	+	152798949	152799183	True	NM_178351,NM_178348	chr1,chr1	-,+	LCE1C,LCE1A	-19842,765
chr1:150208085-150208668	chr1	+	150208286	150208682	True	NM_012113,NM_001136478,NM_001136479,NM_030920	chr1,chr1,chr1,chr1	+,-,-,-	CA14,ANP32E,ANP32E,ANP32E	21535,0,-1260,0
chr19:1276483-1276804	chr19	+	1276657	1276775	True	NM_001280,NR_027271,NM_017914,NR_023313,NR_023312,NM_001405	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+	CIRBP,C19orf23,C19orf24,CIRBP,CIRBP,EFNA2	-7441,-6398,-1188,-7441,-7441,9392
chr9:33167518-33167838	chr9	+	33167518	33167864	True	NM_001497,NM_014471	chr9,chr9	-,+	B4GALT1,SPINK4	-162,72331
chr8:98654259-98654593	chr8	+	98654259	98654600	True	NM_033512,NM_178812	chr8,chr8	-,+	TSPYL5,MTDH	-364083,1806
chr12:51318464-51319026	chr12	+	51318472	51319002	True	NM_014033,NM_001174130	chr12,chr12	+,-	METTL7A,SLC11A2	11,84101
chr9:21494829-21496829	chr9	+	21494857	21496722	True	NM_176891,NM_024013	chr9,chr9	-,+	IFNE,IFNA1	-12545,-54481
chr14:19554686-19556057	chr22	-	16286251	16286312	True	NR_001591,NM_001136213	chr22,chr22	+,-	psiTPTE22,POTEH	796488,1686
chr14:19554686-19556057	chr14	+	19554883	19555759	False	NM_001145442,NR_027480,NM_001005356	chr14,chr14,chr14	-,+,+	POTEM,POTEG,POTEG	464571,-1580,-1580
chr20:3151824-3152165	chr20	+	3151876	3152087	True	NM_014731,NM_033453	chr20,chr20	-,+	ProSAPiP1,ITPA	-2669,37968
chr3:135971017-135972022	chr3	+	135971047	135971926	True	NM_001178014,NM_000532,NM_018133	chr3,chr3,chr3	+,+,-	PCCB,PCCB,MSL2	-1935,-1935,-56359
chr17:56835655-56836160	chr17	+	56835937	56836172	True	NM_014906,NM_198393	chr17,chr17	+,-	PPM1E,TEX14	-2763,-66521
chr4:149357036-149357854	chr4	+	149357037	149357895	True	NM_001166104,NM_000901,NM_024605	chr4,chr4,chr4	-,-,+	NR3C2,NR3C2,ARHGAP10	5831,5831,-703635
chr4:84375721-84376593	chr4	+	84375914	84376489	True	NM_133636,NM_016067	chr4,chr4	-,+	HELQ,MRPS18C	587,628
chr2:169948264-169948471	chr2	+	169948263	169948509	True	NM_001142271,NM_003742	chr2,chr2	+,-	DHRS9,ABCB11	-10697,-60430
chr15:96985516-96985726	chr15	+	96985709	96985775	True	NM_001145157,NR_034095	chr15,chr15	+,-	NR2F2,LOC400456	-109198,-1115380
chrX:135624213-135625227	chrX	+	135624253	135625264	True	NM_016267,NM_004840,NR_030631	chrX,chrX,chrX	+,-,+	VGLL1,ARHGEF6,MIR934	-9993,238290,7772
chr11:66362957-66363629	chr11	+	66363107	66363451	True	NM_005125,NM_018219	chr11,chr11	+,-	CCS,CCDC87	-2468,-2553
chr14:21271016-21271470	chr14	+	21271168	21271392	True	NM_198232,NM_005615,NM_198234,NM_002933,NM_198235	chr14,chr14,chr14,chr14,chr14	-,+,-,-,-	RNASE1,RNASE6,RNASE1,RNASE1,RNASE1	-610,-22016,-132,-132,-132
chr11:78126008-78127616	chr11	+	78126416	78127654	True	NM_080491,NM_020798	chr11,chr11	-,+	GAB2,USP35	1264,-226609
chr11:65293777-65294521	chr11	+	65294026	65294566	True	NM_001048218,NM_001130144,NM_020680	chr11,chr11,chr11	+,-,+	SCYL1,LTBP3,SCYL1	-1529,31183,-1529
chr19:4669711-4669943	chr19	+	4669737	4669813	True	NM_001167942,NM_019107	chr19,chr19	+,-	TNFAIP8L1,C19orf10	-29759,652
chr5:68787763-68788085	chr5	+	68787795	68788061	True	NM_002538,NM_001205254,NM_001015892	chr5,chr5,chr5	+,+,-	OCLN,OCLN,TAF9	57,528,-121955
chr15:77287515-77287792	chr15	+	77287584	77287804	True	NM_003978,NM_001168412	chr15,chr15	+,-	PSTPIP1,TSPAN3	-170,75816
chr20:44035683-44035884	chr20	+	44035833	44035917	True	NM_015937,NM_001184730,NM_001197140,NM_014477,NM_001184729,NM_001184728,NM_001197139,NM_001048226,NM_001048225,NM_001048224,NM_001048223,NM_001048222,NM_001048221,NM_018478	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,+,+,-,+,+,+,+,+,+,+,+,+,+	PIGT,PIGT,DBNDD2,TP53TG5,PIGT,PIGT,DBNDD2,DBNDD2,DBNDD2,DBNDD2,DBNDD2,DBNDD2,DBNDD2,DBNDD2	8789,8789,-1063,-28876,8789,8789,-1251,711,711,-656,-656,-1229,-1229,-1023
chr15:41055274-41055749	chr15	+	41055346	41055798	True	NM_018145,NM_001130448,NM_005258	chr15,chr15,chr15	-,+,+	FAM82A2,C15orf62,GCHFR	-7888,6360,486
chr12:72244143-72244488	chr12	+	72244150	72244472	True	NR_027449,NR_024072	chr12,chr12	+,-	TBC1D15,MRS2P2	-10714,341
chr5:96014473-96015197	chr5	+	96014575	96015233	True	NM_001042440,NM_016442	chr5,chr5	+,-	CAST,ERAP1	-16732,128709
chr3:29322509-29322888	chr3	+	29322558	29322881	True	NM_014483,NM_001003793,NM_001003792,NM_001177712,NM_001134433,NM_001177711	chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,-,+	RBMS3,RBMS3,RBMS3,RBMS3,AZI2,RBMS3	3,3,3,3,-931940,3
chr20:4127637-4128552	chr20	+	4127717	4128437	True	NM_175839,NM_000678,NM_175840,NM_175841,NM_175842	chr20,chr20,chr20,chr20,chr20	+,-,+,+,+	SMOX,ADRA1D,SMOX,SMOX,SMOX	1012,101284,1012,1012,1012
chr6:90979522-90980626	chr6	+	90979626	90980130	True	NM_021813,NM_032602	chr6,chr6	-,+	BACH2,GJA10	26486,-375489
chr12:1930057-1930264	chr12	+	1930063	1930303	True	NM_001039029,NM_001163925,NM_001163926,NM_172364	chr12,chr12,chr12,chr12	+,+,+,-	LRTM2,LRTM2,LRTM2,CACNA2D4	-681,-681,-681,97617
chr9:12778269-12779432	chr9	+	12778318	12779207	True	NM_203403,NM_003829	chr9,chr9	+,-	C9orf150,MPDZ	-3364,471215
chr10:48848912-48850326	chr10	+	48849142	48850179	True	NR_033172,NM_153034	chr10,chr10	-,+	FRMPD2P1,ZNF488	12566,-494105
chr10:48848912-48850326	chr10	+	49370450	49370739	False	NR_033172,NM_002750	chr10,chr10	-,+	FRMPD2P1,MAPK8	12558,238947
chr10:48848912-48850326	chr10	+	46662241	46663278	False	NR_027632,NM_015605	chr10,chr10	+,-	FAM35B,PTPN20B	234362,-21238
chr6:54707914-54708314	chr6	+	54708065	54708146	True	NM_001010872,NM_001042406	chr6,chr6	+,-	FAM83B,HMGCLL1	3422,735923
chr1:40942278-40942753	chr1	+	40942609	40942799	True	NM_001852,NM_198494	chr1,chr1	-,+	COL9A2,ZNF642	-159670,502
chr9:72374369-72374581	chr9	+	72374374	72374594	True	NM_001099666,NM_001010940	chr9,chr9	-,+	PTAR1,C9orf135	332,61136
chr6:37137452-37137731	chr6	+	37137457	37137725	True	NM_145316,NM_002648	chr6,chr6	-,+	TMEM217,PIM1	87738,196
chr6:40556566-40558534	chr6	+	40557143	40558443	True	NR_024015,NM_020737	chr6,chr6	+,-	TDRG1,LRFN2	-211038,-2017
chr16:29572910-29574562	chr16	+	29573428	29573978	True	NM_001030288,NR_002473	chr16,chr16	+,-	SPN,LOC440354	100321,3622
chr16:29572910-29574562	chr16	+	30313135	30313451	False	NM_013292,NR_002473	chr16,chr16	+,-	MYLPF,LOC440354	72671,3851
chr8:42196369-42197276	chr8	+	42196467	42196897	True	NM_014420,NM_002690	chr8,chr8	-,+	DKK4,POLB	37833,-488
chr2:233391863-233392174	chr2	+	233392039	233392167	True	NM_001195129,NM_145702,NM_000751	chr2,chr2,chr2	+,-,+	PRSS56,TIGD1,CHRND	-6917,23109,-1168
chr17:40948576-40950280	chr17	+	40948841	40950185	True	NM_173478,NM_001040431	chr17,chr17	+,-	CNTD1,CCDC56	668,569
chr10:75097999-75099429	chr10	+	75098034	75099204	True	NM_173348,NM_145170	chr10,chr10	+,-	FAM149B1,TTC18	-170208,19464
chr11:72977708-72979183	chr11	+	72978125	72979051	True	NM_014824,NM_176797,NM_176796,NM_176798,NM_004154	chr11,chr11,chr11,chr11,chr11	-,+,+,+,+	FCHSD2,P2RY6,P2RY6,P2RY6,P2RY6	-124982,-2613,-2613,1887,4195
chr10:17658190-17658786	chr10	+	17658303	17658738	True	NM_003473,NM_014241	chr10,chr10	+,-	STAM,PTPLA	27385,685
chr19:49400841-49401413	chr19	+	49400977	49401214	True	NM_003323,NM_006184	chr19,chr19	-,+	TULP2,NUCB1	839,2092
chr3:138048726-138049009	chr3	+	138048857	138049031	True	NM_012219,NM_178130	chr3,chr3	+,-	MRAS,TXNDC6	17593,-129
chr8:92053716-92054745	chr8	+	92053717	92054389	True	NM_016023,NM_018710	chr8,chr8	+,-	OTUD6B,TMEM55A	28034,-514
chr10:135049486-135049754	chr10	+	135049513	135049655	True	NR_030170,NM_014468,NM_003577	chr10,chr10,chr10	-,+,+	MIR202,VENTX,UTF1	11519,1752,-5786
chr8:95961930-95962225	chr8	+	95962198	95962272	True	NM_152416,NM_001135733,NM_033285	chr8,chr8,chr8	+,-,-	C8orf38,TP53INP1,TP53INP1	74948,-583,-583
chr20:61298397-61298696	chr20	+	61298421	61298647	True	NM_016354,NR_024470	chr20,chr20	+,-	SLCO4A1,LOC100127888	-24675,-448
chr2:204638501-204639836	chr2	+	204638570	204639696	True	NM_006139,NM_203365	chr2,chr2	+,-	CD28,RAPH1	-67423,-238512
chr19:5624102-5624640	chr19	+	5624292	5624676	True	NM_001201338,NM_001201339,NR_037699,NM_014649,NM_002967,NM_001201340	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,-,+,+	SAFB,SAFB,SAFB,SAFB2,SAFB,SAFB	-1297,-1297,-1297,-1354,-1297,-1297
chr7:29603277-29603573	chr7	+	29603334	29603590	True	NR_024278,NM_175887	chr7,chr7	-,+	LOC646762,PRR15	121214,42
chr1:101491476-101491737	chr1	+	101491499	101491643	True	NM_001077395,NM_001077394,NM_133496,NM_015958	chr1,chr1,chr1,chr1	-,-,+,-	DPH5,DPH5,SLC30A7,DPH5	-137,-137,-129916,-137
chr1:150690128-150691259	chr1	+	150690648	150691065	True	NM_001199829,NM_032132,NR_036211	chr1,chr1,chr1	-,-,+	HORMAD1,HORMAD1,MIR4257	2358,2358,-166294
chr22:44967203-44968038	chr22	+	44967209	44968037	True	NR_028409,NM_032287,NR_028411,NR_028410	chr22,chr22,chr22,chr22	+,-,+,+	NCRNA00207,LDOC1L,NCRNA00207,NCRNA00207	-2040,-73204,-2040,-2040
chr22:24179832-24180062	chr22	+	24179847	24179987	True	NM_198440,NM_001002862,NM_001024938,NM_001135751	chr22,chr22,chr22,chr22	-,-,+,-	DERL3,DERL3,SLC2A11,DERL3	1262,1262,19071,1262
chr15:53082445-53082670	chr15	+	53082496	53082688	True	NM_004498,NM_002748	chr15,chr15	-,+	ONECUT1,MAPK6	-287,-771136
chr22:41347326-41347595	chr22	+	41347354	41347620	True	NM_014248,NM_145174	chr22,chr22	+,-	RBX1,DNAJB7	-54,-89224
chr6:25731547-25732815	chr6	+	25731747	25732652	True	NM_170745,NM_170610	chr6,chr6	-,+	HIST1H2AA,HIST1H2BA	-4957,-4661
chr13:48667817-48669024	chr13	+	48667913	48668925	True	NM_018283,NM_014166	chr13,chr13	+,-	NUDT15,MED4	-56270,365
chr8:19172053-19173218	chr8	+	19172146	19173258	True	NM_001174159,NM_001174160,NM_001130518,NM_022071	chr8,chr8,chr8,chr8	+,+,-,+	SH2D4A,SH2D4A,CSGALNACT1,SH2D4A	-711,-1117,286850,-1117
chr11:120004109-120005609	chr11	+	120004444	120005658	True	NM_012101,NM_178507	chr11,chr11	-,+	TRIM29,OAF	3255,76088
chr15:75630407-75631708	chr15	+	75630410	75631420	True	NR_030360,NM_024608,NM_017828	chr15,chr15,chr15	-,+,+	MIR631,NEIL1,COMMD4	14656,7910,-2087
chr18:19180872-19181185	chr18	+	19181057	19181181	True	NM_006938,NM_052911	chr18,chr18	+,-	SNRPD1,ESCO1	11078,-364
chr3:183541109-183542547	chr3	+	183541678	183542288	True	NM_024871,NM_018023	chr3,chr3	-,+	MAP6D1,YEATS2	1155,-126123
chr10:95242726-95243049	chr10	+	95242727	95242953	True	NM_001127182,NM_013451,NM_133337	chr10,chr10,chr10	+,-,-	CEP55,MYOF,MYOF	13415,-653,-653
chr11:59518966-59519702	chr11	+	59519045	59519402	True	NM_004177,NM_001005324,NM_001178040	chr11,chr11,chr11	+,-,+	STX3,OR10V1,STX3	3129,-37727,3129
chr18:46479340-46479787	chr18	+	46479402	46479649	True	NM_001190822,NM_001190821,NM_005904,NM_014772	chr18,chr18,chr18,chr18	-,-,-,+	SMAD7,SMAD7,SMAD7,CTIF	-3699,-2321,-2321,-414026
chr19:39617434-39617963	chr19	+	39617446	39617884	True	NM_001014832,NM_001014831,NM_001014835,NM_001014834,NM_005884,NM_001080468	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,-	PAK4,PAK4,PAK4,PAK4,PAK4,SYCN	-1077,-1077,-1077,-1077,-1077,77072
chr17:18160617-18161297	chr17	+	18160616	18161108	True	NM_001144900,NM_148886,NM_002018,NM_139162	chr17,chr17,chr17,chr17	+,+,-,+	SMCR7,SMCR7,FLII,SMCR7	2739,3315,997,2739
chr22:28315530-28315948	chr22	+	28315535	28315941	True	NR_036169,NR_026963,NR_026962,NM_012399,NR_036170	chr22,chr22,chr22,chr22,chr22	-,+,+,-,+	MIR3199-1,TTC28-AS1,TTC28-AS1,PITPNB,MIR3199-2	709,-222,-222,-280,572
chr2:112898771-112899479	chr2	+	112898869	112899503	True	NM_001128165,NM_032494,NM_153214	chr2,chr2,chr2	+,-,+	FBLN7,ZC3H8,FBLN7	-2958,113211,-2958
chr18:74173067-74173807	chr18	+	74173238	74173732	True	NR_015417,NM_014643	chr18,chr18	+,-	LOC284276,ZNF516	66879,33464
chr19:35718818-35719111	chr19	+	35718852	35719142	True	NM_152481,NM_015925	chr19,chr19	-,+	FAM187B,LSR	536,20416
chr22:17956460-17957465	chr22	+	17956627	17957306	True	NM_001039366,NM_031413	chr22,chr22	-,+	ATP6V1E1,CECR2	154339,-50
chr12:89741596-89743327	chr12	+	89741598	89743260	True	NR_028138,NM_022652,NM_001946	chr12,chr12,chr12	+,-,-	LOC338758,DUSP6,DUSP6	359471,3086,3086
chr20:44539833-44540511	chr20	+	44539886	44540481	True	NM_001167594,NM_006227,NM_182676	chr20,chr20,chr20	+,-,-	CTSA,PLTP,PLTP	-20346,355,355
chr17:4474760-4475309	chr17	+	4474769	4475336	True	NM_198501,NM_153338	chr17,chr17	+,-	SMTNL2,GGT6	11939,-10893
chr6:136872988-136874005	chr6	+	136873157	136874040	True	NM_000288,NM_001198616,NM_001198617,NM_003980	chr6,chr6,chr6,chr6	+,-,-,-	PEX7,MAP7,MAP7,MAP7	269661,-1200,-1200,-1200
chr19:44036567-44037077	chr19	+	44036670	44037058	True	NM_014297,NM_174945	chr19,chr19	-,+	ETHE1,ZNF575	-5274,281
chr19:28284531-28284781	chr19	+	28284533	28284737	True	NR_027318,NR_027301	chr19,chr19	+,-	LOC148145,LOC148189	1171300,161
chr16:65264641-65266329	chr16	+	65265186	65265248	True	NM_001795,NM_001797	chr16,chr16	+,-	CDH5,CDH11	1135276,-109267
chr14:60099674-60100887	chr14	+	60099975	60100905	True	NM_016475,NM_206852	chr14,chr14	+,-	JKAMP,RTN1	-148871,-2455
chrX:140981166-140982365	chrX	+	140981336	140982356	True	NM_005462,NM_145665,NM_177456	chrX,chrX,chrX	+,-,+	MAGEC1,SPANXE,MAGEC3	9285,-194681,95
chr1:151763813-151765086	chr1	+	151763895	151764916	True	NM_016178,NM_006862,NM_001083963,NM_001083965,NM_001083964	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	OAZ3,TDRKH,TDRKH,TDRKH,TDRKH	-24815,-885,-885,-885,-885
chr19:40032640-40033279	chr19	+	40032791	40033217	True	NM_152361,NM_153232,NM_182704	chr19,chr19,chr19	-,-,+	EID2B,EID2,SELV	-9297,-1953,-27102
chr3:9836949-9837702	chr3	+	9836986	9837427	True	NM_001024959,NM_001024960,NM_133480,NM_006354,NM_005718,NM_001198793,NM_001198780	chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,-,-,+,+,+	ARPC4,ARPC4,TADA3,TADA3,ARPC4,ARPC4-TTLL3,ARPC4	-2862,-2862,-2566,-2566,-2809,-2809,-2240
chr2:109748111-109749603	chr2	+	109748337	109749499	True	NR_036223,NR_029193,NM_001099289	chr2,chr2,chr2	-,-,+	MIR4265,LOC100287216,SH3RF3	8609,-1762,-2392
chrY:15014373-15015599	chrY	+	15014677	15015561	True	NM_004660,NM_001122665,NR_033667	chrY,chrY,chrY	+,+,-	DDX3Y,DDX3Y,GYG2P1	1137,457,-481288
chr3:183873833-183874188	chr3	+	183873945	183874207	True	NM_005787,NM_004423	chr3,chr3	-,+	ALG3,DVL3	92602,-712
chr9:27106-28937	chr12	-	75700	75908	False	NR_028269,NR_026823	chr12,chr12	+,-	LOC100288778,FAM138D	12075,73568
chr9:27106-28937	chr19	+	68651	70313	False	NR_026820,NR_026818,NM_001005240,NR_033266	chr19,chr19,chr19,chr19	-,-,+,-	FAM138F,FAM138A,OR4F17,WASH5P	7429,7429,40365,705
chr9:27106-28937	chr15	-	102502772	102503391	False	NR_026819,NR_034090	chr15,chr15	+,-	FAM138E,DDX11L9	-7736,15969
chr9:27106-28937	chr1	+	27043	28705	False	NM_001005221,NR_028325	chr1,chr1	-,+	OR4F29,LOC100132062	593381,295186
chr9:27106-28937	chr9	+	27156	28819	True	NM_182905,NM_203447,NR_026822	chr9,chr9,chr9	-,+,-	WASH1,DOCK8,FAM138C	972,186045,7097
chr11:57525563-57526767	chr11	+	57525784	57526656	True	NM_001085468,NM_001085469,NM_001085459,NM_001085458,NM_001085462,NM_001085463,NM_001085460,NM_001085461,NM_001085466,NM_001085467,NM_001085464,NM_001085465,NM_001331,NM_001145101	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,+,+,+,+,+,+,+,+,-	CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,BTBD18	2577,2577,2577,2577,2577,2577,2577,2577,2577,2577,2577,2577,2577,-6531
chr5:10665149-10665672	chr5	+	10665174	10665643	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-100798,95794
chr2:239337745-239338125	chr2	+	239337766	239338152	True	NR_037809,NM_001040445	chr2,chr2	-,+	LOC151171,ASB1	126038,-2197
chr6:142698652-142700624	chr6	+	142698703	142700251	True	NR_027311,NM_198569	chr6,chr6	-,+	LOC153910,GPR126	258772,-75705
chr2:241074655-241075358	chr2	+	241074791	241075357	True	NM_001163424,NM_148961,NM_138336,NM_002081	chr2,chr2,chr2,chr2	-,-,-,+	MYEOV2,OTOS,MYEOV2,GPC1	440,4766,457,299757
chr19:7049323-7050594	chr19	+	7049361	7050118	True	NM_001164419,NM_144614,NM_001164425	chr19,chr19,chr19	-,+,-	MBD3L4,MBD3L2,MBD3L3	-9177,-61,8584
chr19:7049323-7050594	chr19	-	7020674	7021431	False	NR_024372,NM_001136507	chr19,chr19	-,+	FLJ25758,MBD3L5	-14248,9162
chr7:99040202-99041131	chr7	+	99040341	99041116	True	NM_015545,NM_006693,NM_001081559	chr7,chr7,chr7	-,+,+	PTCD1,CPSF4,CPSF4	-3879,-3830,-3830
chr1:75117807-75118719	chr1	+	75118062	75118522	True	NM_001162916,NM_001002912	chr1,chr1	+,-	TYW3,C1orf173	80313,20950
chrX:153641059-153641618	chrX	+	153641263	153641601	True	NM_001009932,NM_001009933,NM_001009934,NM_000116,NM_006730,NM_181313,NM_181312,NM_181311,NR_024048	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,+,-,+,+,+,+	DNASE1L1,DNASE1L1,DNASE1L1,TAZ,DNASE1L1,TAZ,TAZ,TAZ,TAZ	-836,-836,-836,-1439,-3688,-1439,-1439,-1439,-1439
chr6:6608761-6609373	chr6	+	6608789	6609302	True	NM_004271,NR_026970	chr6,chr6	+,-	LY86,LY86-AS1	-19915,13808
chr19:42818171-42818575	chr19	+	42818233	42818500	True	NM_173633,NM_001145940	chr19,chr19	+,-	TMEM145,PAFAH1B3	-807,-11281
chrX:54949156-54950179	chrX	+	54949266	54950112	True	NM_002625,NM_001039705,NM_177556,NM_016157	chrX,chrX,chrX,chrX	-,+,+,+	PFKFB1,TRO,TRO,TRO	70449,-2068,-2068,-2068
chr9:5960416-5961891	chr9	+	5960811	5961906	True	NM_001017969,NM_005511	chr9,chr9	-,+	KIAA2026,MLANA	46151,-69962
chr8:91658564-91659259	chr8	+	91658682	91659194	True	NM_001008495,NM_001146273,NM_022351	chr8,chr8,chr8	-,-,+	TMEM64,TMEM64,NECAB1	-549,-549,144726
chr12:125809092-125810686	chr12	+	125809345	125810485	True	NM_032656,NM_052907	chr12,chr12	-,+	DHX37,TMEM132B	-335678,676
chr2:171571361-171571903	chr2	+	171571400	171571852	True	NM_001003845,NR_027433	chr2,chr2	+,-	SP5,LOC440925	4,-323
chr20:44352617-44352847	chr20	+	44352620	44352852	True	NM_178455,NM_172131	chr20,chr20	+,-	SPINT4,WFDC10B	-1690,-18962
chr22:39547945-39548270	chr22	+	39547953	39548221	True	NM_181773,NM_175709	chr22,chr22	+,-	APOBEC3H,CBX7	-54775,367
chr17:3600639-3601233	chr17	+	3600824	3601226	True	NM_031965,NM_002561,NM_175080,NR_037928,NM_001204520,NM_001204519	chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,-,-,-	GSG2,P2RX5,P2RX5,P2RX5-TAX1BP3,P2RX5,P2RX5	25970,-1126,-1126,-1126,-1126,-1126
chr8:7679264-7680057	chr8	+	7679478	7680085	True	NM_001040703,NM_001040704,NM_001040705,NM_001037668,NM_152250,NM_152251	chr8,chr8,chr8,chr8,chr8,chr8	-,+,-,-,-,+	DEFB105B,DEFB106B,DEFB107B,DEFB107A,DEFB105A,DEFB106A	1325,2608,-6240,-6240,1325,2608
chr8:7679264-7680057	chr8	-	7346517	7347124	False	NM_001040703,NM_001040704,NM_001040705,NM_001037668,NM_152250,NM_152251	chr8,chr8,chr8,chr8,chr8,chr8	+,-,+,+,+,-	DEFB105B,DEFB106B,DEFB107B,DEFB107A,DEFB105A,DEFB106A	-1325,-2608,6243,6243,-1325,-2608
chr9:37784212-37784700	chr9	+	37784214	37784624	True	NM_016042,NM_001002269,NM_024345	chr9,chr9,chr9	-,-,+	EXOSC3,EXOSC3,DCAF10	491,493,16165
chr4:71854507-71854855	chr4	+	71854640	71854846	True	NM_002092,NM_000788	chr4,chr4	-,+	GRSF1,DCK	-149013,4418
chr9:116345148-116345625	chr9	+	116345170	116345580	True	NM_017443,NM_021106	chr9,chr9	-,+	POLE3,RGS3	-172141,-2290
chr11:124544392-124545253	chr11	+	124544403	124545289	True	NM_017425,NM_170601,NM_001199922	chr11,chr11,chr11	+,-,-	SPA17,SIAE,SIAE	-714,-626,961
chr9:33000546-33000936	chr9	+	33000669	33000822	True	NM_001195254,NR_036577,NM_001195252,NM_001195251,NM_001195250,NR_036579,NR_036578,NM_001195248,NM_001195249,NM_175069,NM_001539,NM_175073,NR_036576	chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,-,-,-,-,-,-,-,-,-,+,-,-	APTX,APTX,APTX,APTX,APTX,APTX,APTX,APTX,APTX,APTX,DNAJA1,APTX,APTX	845,874,874,874,874,809,845,874,809,874,24386,874,874
chr17:20517357-20517660	chr17	+	20517357	20517697	True	NM_001190790,NR_029393	chr17,chr17	+,-	CDRT15L2,KRT16P3	-34371,-109546
chr20:13620427-13621637	chr20	+	13620729	13621525	True	NM_001039375,NM_017714	chr20,chr20	+,-	C20orf7,TASP1	144146,-1146
chr2:79384951-79385742	chr2	+	79384951	79385726	True	NM_002580,NM_138938,NM_138937,NM_002909	chr2,chr2,chr2,chr2	-,-,-,+	REG3A,REG3A,REG3A,REG1A	1205,1204,1205,-37418
chr11:67057357-67057890	chr11	+	67057428	67057936	True	NM_021173,NR_030767,NM_207354	chr11,chr11,chr11	-,+,+	POLD4,ANKRD13D,ANKRD13D	63166,-663,-717
chr3:58298077-58298840	chr3	+	58298240	58298412	True	NM_007042,NM_004944,NM_001098783	chr3,chr3,chr3	+,-,+	RPP14,DNASE1L3,RPP14	-6328,-97842,-6330
chr22:42092495-42092832	chr22	+	42092670	42092806	True	NM_001003796,NM_001142964,NM_152513	chr22,chr22,chr22	-,+,+	NHP2L1,C22orf46,MEI1	-7757,-6174,2711
chr14:103022473-103022887	chr14	+	103022626	103022886	True	NM_152326,NR_036192	chr14,chr14	-,+	ANKRD9,MIR4309	-46498,-16696
chr12:54474283-54475277	chr12	+	54474350	54475291	True	NR_026657,NR_026658	chr12,chr12	+,-	LOC100240734,LOC100240735	20701,366
chr12:54474283-54475277	chr9	-	44867886	44867940	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	122295,-1237156
chr12:54474283-54475277	chr20	+	29524144	29524198	False	NM_001037731,NR_003579	chr20,chr20	-,+	DEFB116,FRG1B	372240,87680
chr4:155470298-155471275	chr4	+	155470468	155471255	True	NM_002669,NM_001201564,NM_001184741	chr4,chr4,chr4	-,-,+	PLRG1,PLRG1,FGB	380,380,12876
chr17:59488124-59488423	chr17	+	59488141	59488271	True	NM_199290,NM_203425	chr17,chr17	-,+	NACA2,C17orf82	180342,840
chr17:33880952-33881650	chr17	+	33880998	33881680	True	NR_003037,NM_001129820	chr17,chr17	+,-	SNORD7,SLFN14	18995,3480
chr12:54349738-54350229	chr12	+	54349833	54350262	True	NM_173860,NR_003716	chr12,chr12	+,-	HOXC12,HOTAIR	-1170,12303
chr19:49075163-49076491	chr19	+	49075243	49075833	True	NM_017708,NM_004605	chr19,chr19	-,+	FAM83E,SULT2B1	40911,3159
chr12:49178546-49179208	chr12	+	49178680	49179130	True	NM_000725,NM_020983,NM_015270	chr12,chr12,chr12	+,-,-	CACNB3,ADCY6,ADCY6	33381,3740,-803
chr2:7058817-7059476	chr2	+	7058916	7059222	True	NR_033997,NM_014746	chr2,chr2	-,+	LOC386597,RNF144A	-103,-1444
chr11:50162489-50164416	chr11	+	50162695	50164463	True	NR_003034,NM_001001955	chr11,chr11	-,+	LOC441601,OR4C13	93220,-188820
chrX:9731667-9732786	chrX	+	9731675	9732771	True	NM_001649,NM_000273	chrX,chrX	+,-	SHROOM2,GPR143	21724,1286
chr5:176238434-176239231	chr5	+	176238548	176239254	True	NM_133369,NM_002115	chr5,chr5	+,-	UNC5A,HK3	-1039,87129
chr20:1598990-1600436	chr20	+	1599168	1600456	True	NM_001135844,NM_001083910,NM_006065,NM_001040022	chr20,chr20,chr20,chr20	-,-,-,+	SIRPB1,SIRPB1,SIRPB1,SIRPA	283,283,283,274356
chr2:237175681-237176345	chr2	+	237175680	237176290	True	NM_020311,NM_212556	chr2,chr2	+,-	CXCR7,ASB18	302089,-2692
chr6:26018871-26020178	chr6	+	26018898	26020194	True	NM_005325,NM_003544,NM_003529,NM_003538	chr6,chr6,chr6,chr6	-,-,+,+	HIST1H1A,HIST1H4B,HIST1H3A,HIST1H4A	-858,7336,523,1712
chr14:24610723-24611115	chr14	+	24610851	24611143	True	NM_017999,NM_016049,NM_006263,NM_176783,NM_002818	chr14,chr14,chr14,chr14,chr14	+,-,+,+,-	RNF31,FAM158A,PSME1,PSME1,PSME2	5515,-54,-5524,-5524,4762
chrX:79277027-79277258	chrX	+	79277026	79277306	True	NM_001109878,NM_001109879,NM_004867,NM_016954	chrX,chrX,chrX,chrX	+,+,-,+	TBX22,TBX22,ITM2A,TBX22	-6822,-6822,-653977,435
chr7:150417877-150418618	chr7	+	150418025	150418626	True	NM_130759,NM_001101311,NM_001199577	chr7,chr7,chr7	+,-,+	GIMAP1,TMEM176B,GIMAP1-GIMAP5	-4431,79046,-4431
chrX:52533113-52533395	chrX	+	52533192	52533404	True	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,-,-,-,-,-,-,-,-,-,-	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	-42,-98,-98,-37,-98,-98,-98,-42,-37,-42,-37,-37,-37,-42,-42
chrX:52533113-52533395	chrX	-	52238708	52238920	False	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,+,+,+,+,+,+,+,+,+,+	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	42,98,98,37,98,98,98,42,37,42,37,37,37,42,42
chrX:52533113-52533395	chrX	+	52260252	52260464	False	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,-,-,-,-,-,-,-,-,-,-	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	-42,-98,-98,-37,-98,-98,-98,-42,-37,-42,-37,-37,-37,-42,-42
chrX:52533113-52533395	chrX	-	52511659	52511871	False	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,+,+,+,+,+,+,+,+,+,+	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	42,98,98,37,98,98,98,42,37,42,37,37,37,42,42
chrX:52533113-52533395	chrX	+	52546086	52546298	False	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,-,-,-,-,-,-,-,-,-,-	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	-42,-98,-98,-37,-98,-98,-98,-42,-37,-42,-37,-37,-37,-42,-42
chr7:44580844-44581221	chr7	+	44580944	44581134	True	NM_001101648,NM_001003941,NM_013389	chr7,chr7,chr7	-,+,-	NPC1L1,OGDH,NPC1L1	-30,64986,-30
chr9:100190821-100191415	chr9	+	100190864	100191390	True	NR_026847,NM_014290	chr9,chr9	-,+	LOC286359,TDRD7	-31891,-16613
chr18:21082033-21082554	chr18	+	21082437	21082603	True	NM_013326,NM_032933	chr18,chr18	+,-	C18orf8,C18orf45	858,-64512
chr21:33985734-33986177	chr21	+	33985861	33986050	True	NR_036552,NR_024622,NM_021254	chr21,chr21,chr21	-,+,-	C21orf59,C21orf49,C21orf59	-948,158360,-943
chr11:71276709-71277425	chr11	+	71277231	71277463	True	NM_001012710,NM_001005405	chr11,chr11	+,-	KRTAP5-10,KRTAP5-11	-673,16508
chr1:46903064-46904206	chr1	+	46903238	46904186	True	NM_001097611,NM_001441	chr1,chr1	-,+	KNCN,FAAH	112751,-43350
chr16:725777-726416	chr16	+	725779	726409	True	NM_001005920,NM_138769,NM_003961,NM_005861	chr16,chr16,chr16,chr16	-,+,+,+	JMJD8,RHOT2,RHBDL1,STUB1	8080,-7697,-45,3705
chr3:46307693-46308373	chr3	+	46307692	46308344	True	NM_001295,NM_178329	chr3,chr3	-,+	CCR1,CCR3	-57860,-23873
chr1:45769700-45769960	chr1	+	45769798	45769996	True	NR_024270,NM_001048174	chr1,chr1	+,-	LOC400752,MUTYH	-267,35683
chr17:16594933-16596788	chr17	+	16595114	16596063	True	NM_020787,NM_014695	chr17,chr17	-,+	ZNF624,CCDC144A	-37947,-1534
chr3:129612611-129613560	chr3	+	129612848	129613409	True	NM_001128224,NR_037893	chr3,chr3	-,+	TMCC1,LOC100507032	-429,-185
chr16:29275694-29276367	chr16	+	29275777	29276391	True	NR_002939,NM_001031827	chr16,chr16	+,-	RUNDC2C,BOLA2	26149,189944
chrX:46772971-46773757	chrX	+	46773036	46773784	True	NM_032591,NM_001077445,NM_014735	chrX,chrX,chrX	-,+,+	SLC9A7,PHF16,PHF16	-154564,-1351,-1219
chr13:46757282-46758097	chr13	+	46757297	46758115	True	NM_002298,NM_001164211	chr13,chr13	-,+	LCP1,LRCH1	-838,369180
chr12:122033435-122034169	chr12	+	122033442	122034006	True	NM_032590,NM_032790	chr12,chr12	-,+	KDM2B,ORAI1	-14522,30448
chr1:203143696-203144791	chr1	+	203143858	203144808	True	NM_004997,NM_001048230	chr1,chr1	-,+	MYBPH,ADORA1	184,-47073
chr17:53053531-53053968	chr17	+	53053554	53053912	True	NM_001162862,NM_001162861,NM_178509,NR_027941,NR_027942,NM_004375	chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,-,-,-	COX11,COX11,STXBP4,COX11,COX11,COX11	-7490,-7490,-7479,-7490,-7490,-7490
chr1:205092693-205093600	chr1	+	205092819	205093634	True	NM_001193273,NM_001193272,NM_005076,NM_005057	chr1,chr1,chr1,chr1	-,-,+,-	RBBP5,RBBP5,CNTN2,RBBP5	-1669,-1669,-80536,-1669
chr17:36958969-36960642	chr17	+	36959068	36960396	True	NM_003559,NM_002795	chr17,chr17	-,+	PIP4K2B,PSMB3	-2910,-50118
chr19:13617936-13618356	chr19	+	13617947	13618346	True	NM_001127222,NM_001127221,NM_000068,NM_001174080,NM_023035,NM_030818	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,+	CACNA1A,CACNA1A,CACNA1A,CACNA1A,CACNA1A,CCDC130	-673,-673,-673,-673,-673,240406
chr10:108880477-108881851	chr10	+	108880496	108881852	True	NM_001013031,NM_014978	chr10,chr10	-,+	SORCS1,SORCS3	42490,-2479688
chr12:131355723-131356250	chr12	+	131355937	131356249	True	NM_194356,NM_006325	chr12,chr12	-,+	STX2,RAN	-32126,367
chr4:110687196-110687476	chr4	+	110687321	110687435	True	NM_018983,NM_000204	chr4,chr4	+,-	GAR1,CFI	49230,35950
chr9:35811740-35812298	chr9	+	35811963	35812323	True	NM_016446,NM_001039592,NM_032593,NM_172312	chr9,chr9,chr9,chr9	+,-,-,-	TMEM8B,SPAG8,HINT2,SPAG8	16898,-14,2769,-14
chr13:53025392-53025760	chr13	+	53025616	53025688	True	NM_001098525,NM_018204,NM_016075	chr13,chr13,chr13	+,+,-	CKAP2,CKAP2,VPS36	3806,3806,-853
chr4:103977205-103978619	chr4	+	103977323	103978325	True	NM_001008388,NM_178833	chr4,chr4	+,-	CISD2,NHEDC2	-187240,19897
chr9:108211783-108212351	chr9	+	108212056	108212394	True	NM_001145313,NM_031919,NM_207647,NM_005502	chr9,chr9,chr9,chr9	+,+,+,-	FSD1L,FSD1L,FSD1L,ABCA1	-1792,-1792,-1782,-521529
chr16:65256188-65256469	chr16	+	65256332	65256398	True	NM_001795,NM_001797	chr16,chr16	+,-	CDH5,CDH11	1144126,-100413
chr20:2819529-2820649	chr20	+	2819555	2820495	True	NM_080413,NM_022760,NM_022575	chr20,chr20,chr20	+,-,+	VPS16,FAM113A,VPS16	877,887,877
chr11:105481252-105481458	chr11	+	105481361	105481485	True	NM_032424,NM_001077243,NM_001112812,NM_001077244,NM_000829	chr11,chr11,chr11,chr11,chr11	-,+,+,+,+	KIAA1826,GRIA4,GRIA4,GRIA4,GRIA4	411519,-612,-1,-612,-612
chr15:34874353-34874914	chr15	+	34874486	34874756	True	NM_175741,NR_027410	chr15,chr15	+,-	C15orf55,GOLGA8B	-236471,1065
chrX:27765734-27766064	chrX	+	27765786	27766053	True	NM_001136533,NM_001017930	chrX,chrX	+,-	DCAF8L2,DCAF8L1	-911,233564
chr13:111635006-111637006	chr13	+	111635218	111636738	True	NM_017664,NM_001113511	chr13,chr13	-,+	ANKRD10,ARHGEF7	-67802,130885
chr14:76446159-76446508	chr14	+	76446180	76446462	True	NM_001102564,NM_052873,NM_003239	chr14,chr14,chr14	+,+,-	C14orf179,C14orf179,TGFB3	5633,5633,1680
chr2:37381323-37381794	chr2	+	37381504	37381715	True	NM_001135651,NR_037879,NM_001135652,NM_002759	chr2,chr2,chr2,chr2	-,+,-,-	EIF2AK2,LOC100505876,EIF2AK2,EIF2AK2	2526,41919,-6539,2526
chr9:94713536-94715029	chr9	+	94713537	94715052	True	NR_015444,NM_004560	chr9,chr9	+,-	LOC100128076,ROR2	180063,-1093
chr4:140478132-140478485	chr4	+	140478214	140478534	True	NM_031296,NM_030648	chr4,chr4	+,-	RAB33B,SETD7	-103304,-637
chr12:7079103-7079553	chr12	+	7079153	7079431	True	NR_029779,NM_007273,NR_029682,NM_001144831,NR_003010,NM_006331	chr12,chr12,chr12,chr12,chr12,chr12	+,-,+,-,-,+	MIR200C,PHB2,MIR141,PHB2,SCARNA12,EMG1	-6343,510,-5945,535,-2384,512
chr3:33840539-33841332	chr3	+	33840693	33841316	True	NM_001162429,NR_027868,NM_013374,NM_015097	chr3,chr3,chr3,chr3	+,+,+,-	PDCD6IP,PDCD6IP,PDCD6IP,CLASP2	-686,-686,-686,-80845
chr14:98541491-98542117	chr14	+	98541502	98542134	True	NR_015430,NM_182560	chr14,chr14	-,+	C14orf64,C14orf177	-97041,635815
chr16:74332345-74333443	chr16	+	74332350	74333218	True	NR_026950,NM_002811	chr16,chr16	-,+	LOC283922,PSMD7	68992,-1733
chr17:28621636-28621850	chr17	+	28621722	28621850	True	NM_001304,NM_000386	chr17,chr17	+,-	CPD,BLMH	84091,-2538
chr19:13227657-13227859	chr19	+	13227755	13227893	True	NM_017722,NM_001136035,NM_001142554,NM_052876	chr19,chr19,chr19,chr19	-,-,-,+	TRMT1,TRMT1,TRMT1,NACC1	-292,-192,-292,1215
chr17:18584297-18585045	chr17	+	18584299	18584927	True	NM_001145045,NM_001037330,NR_026718	chr17,chr17,chr17	-,+,-	ZNF286B,TRIM16L,FOXO3B	695,40474,-7805
chr17:18584297-18585045	chr17	-	15603680	15604308	False	NM_006470,NM_001130842,NM_020652	chr17,chr17,chr17	-,+,+	TRIM16,ZNF286A,ZNF286A	-17487,-840,-840
chr1:111773409-111774284	chr1	+	111773468	111774152	True	NM_001025199,NM_004000,NM_024901,NM_001025197	chr1,chr1,chr1,chr1	+,+,-,+	CHI3L2,CHI3L2,DENND2D,CHI3L2	-1195,-3247,-30187,-3247
chr13:28713544-28714448	chr13	+	28713579	28714462	True	NR_029383,NM_175854	chr13,chr13	-,+	LOC100288730,PAN3	-268,-987
chr5:180415414-180417014	chr5	+	180415727	180416840	True	NM_197975,NM_152283	chr5,chr5	+,-	BTNL3,ZFP62	67,-127441
chr14:91975676-91975917	chr14	+	91975838	91975926	True	NM_032560,NR_003709	chr14,chr14	-,+	SMEK1,SNORA11B	768,-383119
chr17:32687757-32689045	chr17	+	32688116	32688952	True	NM_005408,NM_002981	chr17,chr17	+,-	CCL13,CCL1	-4707,1350
chr6:149953433-149954946	chr6	+	149953570	149954173	True	NM_138785,NM_001204076	chr6,chr6	+,-	C6orf72,KATNA1	-66093,15826
chr7:83827349-83827811	chr7	+	83827348	83827862	True	NM_006080,NM_000840	chr7,chr7	-,+	SEMA3A,GRM3	-3131,2445367
chr17:62833707-62834249	chr17	+	62833715	62833855	True	NR_024386,NM_001165933	chr17,chr17	-,+	PLEKHM1P,RGS9	-413,299600
chr11:71791839-71792188	chr11	+	71791842	71792164	True	NM_006185,NR_036123,NM_145309,NM_001145310,NR_026886,NM_001205138,NM_001145307,NM_001145308,NM_001145309	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,+,+,+,+,+,+,+	NUMA1,MIR3165,LRTOMT,LRTOMT,LRTOMT,LRTOMT,LRTOMT,LRTOMT,LRTOMT	-269,-8494,-516,-511,-200,-516,-516,-516,-511
chr9:34585577-34585976	chr9	+	34585595	34585935	True	NR_024369,NM_001842,NM_147164	chr9,chr9,chr9	+,-,-	LOC415056,CNTFR,CNTFR	-17636,3839,3839
chr11:18608433-18609069	chr11	+	18608734	18608979	True	NM_153347,NM_001040697,NM_018314	chr11,chr11,chr11	+,-,-	TMEM86A,UEVLD,UEVLD	111371,1353,1353
chr8:110708021-110708553	chr8	+	110708021	110708347	True	NM_001099744,NM_004215,NM_001099743	chr8,chr8,chr8	-,+,-	SYBU,EBAG9,SYBU	-4001,-155765,-4001
chr20:23417898-23419071	chr20	+	23418073	23419107	True	NM_080830,NM_138283	chr20,chr20	-,+	CST11,CSTL1	14425,1214
chr11:62428570-62429262	chr11	+	62428918	62429109	True	NR_004390,NM_030628,NM_001043229	chr11,chr11,chr11	+,-,+	SNORA57,INTS5,METTL12	3784,-8144,3669
chr20:18486621-18488142	chr20	+	18486930	18488089	True	NM_006606,NM_006363,NM_032986,NM_032985,NM_001172746,NM_001172745	chr20,chr20,chr20,chr20,chr20,chr20	-,+,+,+,+,+	RBBP9,SEC23B,SEC23B,SEC23B,SEC23B,SEC23B	-9043,98,98,98,120,517
chr5:140712090-140712457	chr5	+	140712405	140712479	True	NM_005642,NM_018915,NM_032009,NM_018912,NM_031993	chr5,chr5,chr5,chr5,chr5	-,+,+,+,+	TAF7,PCDHGA2,PCDHGA2,PCDHGA1,PCDHGA1	-12054,5874,5874,-2204,-2204
chr18:70209731-70210936	chr18	+	70209906	70210774	True	NM_014177,NM_182511	chr18,chr18	+,-	C18orf55,CBLN2	1604971,999
chr1:12229520-12230507	chr1	+	12229627	12230541	True	NM_001066,NM_138346	chr1,chr1	+,-	TNFRSF1B,KIAA2013	-2618,-243142
chrX:135388130-135389032	chrX	+	135388146	135388874	True	NM_001173516,NM_153834	chrX,chrX	-,+	MAP7D3,GPR112	-49505,-5075
chr22:35599941-35600483	chr22	+	35599964	35600382	True	NM_001003681,NM_005368	chr22,chr22	+,-	HMGXB4,MB	53062,413060
chr10:122216806-122217107	chr10	+	122216842	122217048	True	NM_001030059,NR_033850	chr10,chr10	+,-	PPAPDC1A,LOC283089	-427,393693
chr3:9974629-9974861	chr3	+	9974653	9974899	True	NM_001031717,NM_207351,NM_015513,NM_001077415	chr3,chr3,chr3,chr3	+,-,+,+	CRELD1,PRRT3,CRELD1,CRELD1	625,19229,624,625
chr19:42786150-42787980	chr19	+	42786192	42787639	True	NM_015125,NM_002573	chr19,chr19	+,-	CIC,PAFAH1B3	1177,19207
chr14:105954275-105954477	chr14	+	105954370	105954482	True	NM_001311,NM_001519,NM_001198983,NM_001134876,NM_001134877,NM_001134875	chr14,chr14,chr14,chr14,chr14,chr14	+,-,+,+,+,+	CRIP1,BRF1,C14orf80,C14orf80,C14orf80,C14orf80	-1164,-187041,1709,3103,2037,3103
chr1:165323707-165324098	chr1	+	165323723	165324035	True	NM_177398,NM_001174069,NM_001005214	chr1,chr1,chr1	-,-,+	LMX1A,LMX1A,LRRC52	1968,1494,189442
chr3:130637758-130638356	chr3	+	130637851	130638305	True	NM_001001487,NM_014065	chr3,chr3	+,-	ATP2C1,ASTE1	-24468,107391
chr14:20022933-20024220	chr22	+	16290883	16291815	False	NR_001591,NM_001136213	chr22,chr22	+,-	psiTPTE22,POTEH	790985,-2946
chr14:20022933-20024220	chr14	+	20022940	20024198	True	NM_001145442,NM_172194	chr14,chr14	-,+	POTEM,OR4Q3	-2668,191388
chr14:20022933-20024220	chr14	-	19549515	19550448	False	NM_001145442,NR_027480,NM_001005356	chr14,chr14,chr14	-,+,+	POTEM,POTEG,POTEG	469874,2916,2916
chr12:54421374-54422348	chr12	+	54421601	54422326	True	NM_004503,NM_018953,NR_030753,NR_026658	chr12,chr12,chr12,chr12	+,+,+,-	HOXC6,HOXC5,MIR615,LOC100240735	-57,4505,5407,53331
chrX:73074307-73075519	chrX	+	73074529	73075497	True	NR_001564,NR_003255	chrX,chrX	-,+	XIST,TSIX	-1941,-62540
chr2:106683513-106684381	chr2	+	106683784	106684292	True	NM_025076,NM_032411	chr2,chr2	-,+	UXS1,C2orf40	126560,-1732
chr19:14170954-14171731	chr19	+	14170992	14171463	True	NR_024282,NM_001145028	chr19,chr19	+,-	LOC113230,PALM3	12357,-1021
chr2:37377739-37379063	chr2	+	37377750	37378798	True	NM_001135651,NR_037879,NM_001135652,NM_002759	chr2,chr2,chr2,chr2	-,+,-,-	EIF2AK2,LOC100505876,EIF2AK2,EIF2AK2	5449,44836,-2785,5449
chr4:48366697-48367668	chr4	+	48366939	48367571	True	NM_020846,NM_003215	chr4,chr4	+,-	SLAIN2,TEC	-23383,-95125
chr14:93280807-93281983	chr14	+	93280828	93281849	True	NM_005606,NM_005113	chr14,chr14	-,+	LGMN,GOLGA5	-65781,-20229
chr5:132301790-132302042	chr5	+	132301790	132302057	True	NM_014423,NM_002154	chr5,chr5	-,+	AFF4,HSPA4	-2436,85604
chr10:46091447-46092323	chr10	+	46091446	46092124	True	NM_001002265,NM_145021,NM_001169106	chr10,chr10,chr10	-,-,+	MARCH8,MARCH8,FAM21C	-1092,-1092,130523
chr11:93063514-93063957	chr11	+	93063637	93063956	True	NM_152313,NM_181645	chr11,chr11	-,+	SLC36A4,CCDC67	-132542,-36
chr2:43018456-43019436	chr2	+	43018609	43019459	True	NM_020744,NM_012205	chr2,chr2	+,-	MTA3,HAAO	-222989,342
chr2:219725036-219725274	chr2	+	219725081	219725148	True	NM_017431,NM_006522	chr2,chr2	-,+	PRKAG3,WNT6	-28569,-586
chr11:129765936-129766148	chr11	+	129765937	129766101	True	NM_138788,NM_001143835,NM_006165	chr11,chr11,chr11	+,-,-	TMEM45B,NFRKB,NFRKB	-80247,-447,-3033
chr14:96671978-96672858	chr14	+	96672003	96672885	True	NM_000623,NM_018036	chr14,chr14	+,-	BDKRB2,ATG2B	-919,156843
chrX:34675962-34676824	chrX	+	34676039	34676798	True	NM_152631,NM_031442	chrX,chrX	+,-	FAM47B,TMEM47	284114,-634
chrX:128977937-128978254	chrX	+	128977946	128978152	True	NM_001008222,NM_001166221,NM_016032	chrX,chrX,chrX	-,+,-	ZDHHC9,UTP14A,ZDHHC9	-385,61944,-36
chrX:52827977-52829225	chrX	+	52828072	52829090	True	NM_130775,NM_001009616	chrX,chrX	+,-	XAGE5,SPANXN5	12137,-1684
chrX:52827977-52829225	chrX	-	52476480	52477498	False	NR_033251,NM_001097592	chrX,chrX	-,+	XAGE1C,XAGE1A	55647,34262
chrX:52827977-52829225	chrX	-	52203540	52204558	False	NR_033251,NM_001097592	chrX,chrX	-,+	XAGE1C,XAGE1A	55647,34251
chrX:52827977-52829225	chrX	+	52294615	52295633	False	NR_033257,NM_020411	chrX,chrX	+,-	XAGE1E,XAGE1D	-55648,-34252
chr3:120447910-120449831	chr3	+	120447962	120449633	True	NM_173825,NM_005513	chr3,chr3	-,+	RABL3,GTF2E1	11801,11924
chr11:817283-817941	chr11	+	817596	817780	True	NM_001004,NM_145887,NR_002585,NM_020376,NM_173584	chr11,chr11,chr11,chr11,chr11	+,-,+,+,+	RPLP2,LRDD,SNORA52,PNPLA2,EFCAB4A	-7711,-12346,-5966,1120,9804
chr19:46407040-46407889	chr19	+	46407432	46407544	True	NM_004497,NM_001012643	chr19,chr19	+,-	FOXA3,MYPOP	-39965,-1570
chr17:78312639-78313765	chr17	+	78312792	78313512	True	NR_029376,NM_001164638	chr17,chr17	-,+	LOC100294362,FLJ35220	75506,75454
chr2:173493851-173494212	chr2	+	173493864	173494216	True	NR_026995,NM_002610	chr2,chr2	-,+	LOC91149,PDK1	106768,-73138
chr19:14607203-14607441	chr19	+	14607261	14607407	True	NM_001146693,NM_202494,NM_202468,NM_005716,NM_202469,NM_202467,NM_202470	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,-,-,-,-,-	LOC100130932,GIPC1,GIPC1,GIPC1,GIPC1,GIPC1,GIPC1	-7554,-317,-317,-317,-317,-317,-317
chr20:58180172-58180398	chr20	+	58180348	58180416	True	NM_080672,NM_014258	chr20,chr20	+,-	PHACTR3,SYCP2	-796,326843
chr16:16023741-16024165	chr16	+	16023987	16024135	True	NM_144600,NM_004996	chr16,chr16	-,+	FOPNL,ABCC1	-41540,19298
chr6:127839971-127840435	chr6	+	127840108	127840455	True	NM_001010905,NM_001012279	chr6,chr6	+,-	C6orf58,C6orf174	57863,95
chr19:16309250-16309563	chr19	+	16309302	16309548	True	NM_001130524,NM_032493,NM_054113	chr19,chr19,chr19	+,+,-	AP1M1,AP1M1,CIB3	-688,-688,-25016
chr2:58272534-58273769	chr2	+	58272670	58273682	True	NR_036441,NM_001130483,NM_001130482,NM_001130481,NM_001130480,NM_001114636,NM_006296	chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,+,-,+	VRK2,VRK2,VRK2,VRK2,VRK2,FANCL,VRK2	94,94,94,164,94,194883,136
chr19:2163118-2163631	chr19	+	2163502	2163582	True	NM_003938,NM_032482	chr19,chr19	-,+	AP3D1,DOT1L	-11946,565
chr2:178970041-178971110	chr2	+	178970350	178971128	True	NM_001077197,NM_152945	chr2,chr2	-,+	PDE11A,RBM45	1990,6053
chr1:47073136-47074926	chr1	+	47073478	47074818	True	NM_201403,NM_198973,NM_001145474,NM_003684,NR_024174,NM_001135553,NR_024176,NM_145279	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,+,-,-,-,-,-	MOBKL2C,MKNK1,C1orf223,MKNK1,MKNK1,MKNK1,MKNK1,MOBKL2C	7795,-3512,62681,-3512,-3512,-3512,-3512,6037
chr12:53441806-53442303	chr12	+	53441866	53442228	True	NM_198316,NM_015319,NR_033854,NM_170754	chr12,chr12,chr12,chr12	+,+,-,+	TENC1,TENC1,LOC283335,TENC1	-1107,504,6044,1606
chr13:44544476-44544838	chr13	+	44544483	44544809	True	NM_144974,NR_026955	chr13,chr13	-,+	CCDC122,NCRNA00284	-90657,51661
chr13:44544476-44544838	chr11	+	46397670	46398670	False	NM_001012333,NM_002391,NM_001012334,NM_000741	chr11,chr11,chr11,chr11	+,+,+,-	MDK,MDK,MDK,CHRM4	4632,4548,3947,9487
chr13:98794454-98794829	chr13	+	98794459	98794783	True	NM_178861,NM_001001715,NM_005766	chr13,chr13,chr13	-,+,+	RNF113B,FARP1,FARP1	34788,650,650
chr8:48871657-48871958	chr8	+	48871659	48871947	True	NM_001081640,NM_182746,NM_006904,NM_005914	chr8,chr8,chr8,chr8	-,+,-,+	PRKDC,MCM4,PRKDC,MCM4	848,815,848,815
chr2:77727207-77728180	chr2	+	77727225	77728231	True	NM_001134745,NM_198448	chr2,chr2	-,+	LRRTM4,REG3G	21325,1524594
chr12:87058580-87059445	chr12	+	87058742	87059141	True	NM_006183,NM_013244	chr12,chr12	+,-	NTS,MGAT4C	-790735,173603
chr1:19532679-19533589	chr1	+	19533253	19533526	True	NM_020765,NM_016183	chr1,chr1	-,+	UBR4,MRTO4	3270,44548
chr13:99735400-99736377	chr13	+	99735523	99736375	True	NM_001130049,NM_015296,NM_001144072	chr13,chr13,chr13	-,-,+	DOCK9,DOCK9,UBAC2	2335,2335,116303
chr5:146835593-146837466	chr5	+	146835871	146837479	True	NM_001387,NM_001112724	chr5,chr5	-,+	DPYSL3,STK32A	-2611,-221345
chr1:203470640-203470932	chr1	+	203470676	203470920	True	NM_002023,NM_014359	chr1,chr1	-,+	FMOD,OPTC	-150387,-7467
chr21:35982902-35984691	chr21	+	35983048	35984557	True	NM_203417,NM_004414,NM_053277	chr21,chr21,chr21	-,-,+	RCAN1,RCAN1,CLIC6	2238,2875,57130
chr17:27230941-27231600	chr17	+	27231062	27231561	True	NM_144683,NM_005702,NM_004475	chr17,chr17,chr17	-,+,-	DHRS13,ERAL1,FLOT2	-973,-49070,-6347
chr13:28672171-28673712	chr13	+	28672677	28673669	True	NM_004119,NM_175854	chr13,chr13	-,+	FLT3,PAN3	1110,38973
chr16:9185383-9185670	chr16	+	9185384	9185564	True	NM_003470,NM_014117	chr16,chr16	-,+	USP7,C16orf72	-128043,24
chr15:90545856-90546099	chr15	+	90545938	90546104	True	NM_182616,NM_198526	chr15,chr15	-,+	C15orf38,ZNF710	-89716,-1237
chrX:110416752-110418163	chrX	+	110416919	110418124	True	NM_001128173,NM_014289	chrX,chrX	+,-	PAK3,CAPN6	-50678,95700
chr19:51305760-51306193	chr19	+	51306036	51306108	True	NR_003067,NR_003069,NR_003068,NM_033068,NM_199249,NM_199250	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,+,-,-	SNORD88A,SNORD88C,SNORD88B,ACPT,C19orf48,C19orf48	-3244,-358,-3654,-12423,1916,1914
chr3:122747537-122748955	chr3	+	122747928	122748952	True	NM_006810,NM_001031702	chr3,chr3	+,-	PDIA5,SEMA5B	36903,-1352
chr22:42979886-42980115	chr22	+	42979987	42980111	True	NR_002184,NM_014509	chr22,chr22	-,+	RRP7B,SERHL2	-1970,-30113
chr1:6240800-6241522	chr1	+	6240866	6241532	True	NM_207396,NM_015557	chr1,chr1	+,-	RNF207,CHD5	24656,-672
chrX:153674098-153674496	chrX	+	153674144	153674480	True	NM_004699,NM_001493,NM_006014	chrX,chrX,chrX	+,+,-	FAM50A,GDI1,LAGE3	-1710,-8936,33166
chr6:152631080-152632707	chr6	+	152631497	152632608	True	NM_025107,NM_015293	chr6,chr6	+,-	MYCT1,SYNE1	386421,6934
chr2:128432688-128433083	chr2	+	128433028	128433110	True	NM_001161404,NM_001136037,NM_001161403,NM_032740	chr2,chr2,chr2,chr2	-,-,-,+	LIMS2,LIMS2,LIMS2,SFT2D3	6300,-264,-264,25486
chrX:119600855-119601776	chrX	+	119601035	119601593	True	NM_013995,NM_002294,NM_001122606,NM_012069	chrX,chrX,chrX,chrX	-,-,-,+	LAMP2,LAMP2,LAMP2,ATP1B4	1661,1661,1661,-105154
chr12:49505701-49506286	chr12	+	49505766	49506154	True	NM_005430,NM_018113	chr12,chr12	+,-	WNT1,LMBR1L	-133586,-1086
chr1:155889321-155891242	chr1	+	155889803	155891269	True	NR_002974,NM_006912,NR_003005,NM_181885	chr1,chr1,chr1,chr1	-,-,-,+	SNORA42,RIT1,SCARNA4,RXFP4	30,-8626,4658,20210
chr19:35412071-35412874	chr19	+	35412148	35412332	True	NM_001099438,NM_175872,NR_024018,NM_194325,NM_001099437	chr19,chr19,chr19,chr19,chr19	+,-,+,+,+	ZNF30,ZNF792,ZNF30,ZNF30,ZNF30	5474,42675,5474,5474,5474
chr1:215753209-215753904	chr1	+	215753251	215753915	True	NM_206933,NM_016121	chr1,chr1	-,+	USH2A,KCTD3	842885,-12567
chr14:93603225-93604222	chr14	+	93603258	93604072	True	NM_015676,NM_014216	chr14,chr14	+,-	C14orf109,ITPK1	47223,-20995
chrX:105449217-105449826	chrX	+	105449216	105449870	True	NM_152423,NM_000354	chrX,chrX	+,-	MUM1L1,SERPINA7	-36973,-166498
chr5:5393255-5394866	chr5	+	5393354	5394815	True	NM_015325,NR_028351	chr5,chr5	+,-	KIAA0947,FLJ33360	27991,942640
chrX:16888295-16888523	chrX	+	16888393	16888571	True	NM_001198719,NM_002893,NM_001080975	chrX,chrX,chrX	-,-,+	RBBP7,RBBP7,REPS2	-415,13,76242
chr19:5868432-5868701	chr19	+	5868463	5868545	True	NM_002034,NM_001017921	chr19,chr19	-,+	FUT5,VMAC	2064,36306
chr2:27887065-27887271	chr2	+	27887132	27887320	True	NM_014860,NM_018158	chr2,chr2	-,+	SUPT7L,SLC4A1AP	-683,-845
chr19:44811144-44811584	chr19	+	44811143	44811372	True	NM_004234,NM_181756	chr19,chr19	-,+	ZNF235,ZNF233	-1965,-47124
chr16:2937305-2938100	chr16	+	2937486	2937966	True	NM_001142499,NM_138439,NM_022119,NM_001142500	chr16,chr16,chr16,chr16	+,+,-,+	FLYWCH2,FLYWCH2,PRSS22,FLYWCH2	-4356,-4356,-29315,-4356
chr14:103564634-103565012	chr14	+	103564811	103564995	True	NM_001077594,NM_006035	chr14,chr14	+,-	EXOC3L4,CDC42BPB	1485,-41069
chr22:45073266-45073794	chr22	+	45073285	45073807	True	NM_032287,NM_001198721,NM_001017528,NM_001017529,NM_001017530,NM_015366	chr22,chr22,chr22,chr22,chr22,chr22	-,+,+,+,+,+	LDOC1L,PRR5,PRR5,PRR5,PRR5,PRR5	-179280,-648,-8909,-8909,-648,-648
chr5:743990-744664	chr5	+	743992	744430	True	NM_018140,NM_007030	chr5,chr5	+,-	CEP72,TPPP	-131638,-50482
chr1:12833306-12835069	chr1	+	12833372	12834979	True	NM_001146344,NM_001080830	chr1,chr1	-,+	PRAMEF11,PRAMEF12	56336,4
chr6:133088998-133089320	chr6	+	133089052	133089270	True	NM_078488,NM_001016	chr6,chr6	-,+	VNN2,RPS12	-4454,46437
chr17:8659103-8660996	chr17	+	8659161	8660865	True	NM_004822,NM_001128076	chr17,chr17	+,-	NTN1,SPDYE4	263993,1062
chr17:47841031-47841244	chr17	+	47841072	47841263	True	NM_030802,NM_001199155	chr17,chr17	-,+	FAM117A,MYST2	305,24717
chr7:6895208-6895522	chr7	+	6895256	6895530	True	NM_198097,NM_173565	chr7,chr7	-,+	C7orf28B,RSPH10B	-29330,-101567
chr16:23724899-23726728	chr16	+	23724900	23726340	True	NM_005030,NM_033266	chr16,chr16	+,-	PLK1,ERN2	-34757,-79
chr9:140145616-140146095	chr9	+	140145727	140145829	True	NM_001004353,NM_015456,NM_001001710	chr9,chr9,chr9	+,+,-	C9orf173,COBRA1,FAM166A	-56,3929,-3505
chr4:49327867-49329221	chr4	+	49328213	49328891	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-340000,-419398
chr4:49327867-49329221	chr4	-	49285405	49286083	False	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-297191,-376590
chr4:49327867-49329221	chr4	-	49291418	49292098	False	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-303204,-382603
chr5:16617496-16618050	chr5	+	16617622	16618078	True	NM_001034850,NM_006317	chr5,chr5	-,+	FAM134B,BASP1	-504,599671
chr3:25468724-25469490	chr3	+	25468809	25469458	True	NM_016152,NM_000965,NM_001068	chr3,chr3,chr3	+,+,-	RARB,RARB,TOP2B	295,375,236380
chr1:55183300-55184128	chr1	+	55183355	55183750	True	NM_004623,NM_152268	chr1,chr1	+,-	TTC4,PARS2	-1919,46533
chr3:52741276-52741731	chr3	+	52741480	52741774	True	NM_001010983,NM_152932,NM_014041,NM_018446	chr3,chr3,chr3,chr3	-,-,+,-	GLT8D1,GLT8D1,SPCS1,GLT8D1	-1432,-3858,-1684,-1432
chr22:38854969-38855511	chr22	+	38854996	38855504	True	NM_016657,NM_006855,NM_152868	chr22,chr22,chr22	+,+,-	KDELR3,KDELR3,KCNJ4	8578,8578,-3793
chr16:31889798-31891165	chr16	+	31889881	31891197	True	NR_002827,NM_003414	chr16,chr16	-,+	HERC2P4,ZNF267	272727,-4855
chr11:61585432-61586639	chr11	+	61585506	61586290	True	NM_013402,NM_004265,NR_031729	chr11,chr11,chr11	-,+,-	FADS1,FADS2,MIR1908	-977,9422,-2794
chr16:67998004-67998464	chr16	+	67998031	67998437	True	NM_001145961,NM_001145962,NM_001145963,NM_001145964,NM_005072,NM_017803	chr16,chr16,chr16,chr16,chr16,chr16	-,-,-,-,-,+	SLC12A4,SLC12A4,SLC12A4,SLC12A4,SLC12A4,DUS2L	4210,4210,-63,2394,4210,58766
chr1:40913867-40914472	chr1	+	40913887	40914419	True	NM_023070,NM_001852	chr1,chr1	+,-	ZNF643,COL9A2	1917,-130948
chr22:43256207-43257155	chr22	+	43256207	43257141	True	NM_001142293,NM_014570,NR_029422	chr22,chr22,chr22	-,-,+	ARFGAP3,ARFGAP3,RNU12	-2799,-2799,-245015
chr2:200325914-200326675	chr2	+	200325913	200326667	True	NM_015265,NM_001172509,NM_001172517,NR_026830	chr2,chr2,chr2,chr2	-,-,-,+	SATB2,SATB2,SATB2,FLJ32063	9372,-3094,3214,6153
chr4:154263762-154265451	chr4	+	154264038	154265492	True	NM_032117,NR_001562	chr4,chr4	+,-	MND1,ANXA2P1	308,-34075
chr11:66084255-66084508	chr11	+	66084258	66084504	True	NM_020404,NM_153266	chr11,chr11	-,+	CD248,TMEM151A	61,-24936
chr7:123260212-123260707	chr7	+	123260216	123260545	True	NM_080928,NM_005000	chr7,chr7	+,-	ASB15,NDUFA5	-11155,-62258
chrX:139794989-139796707	chrX	+	139795279	139796623	True	NM_004065,NR_028345,NR_028344	chrX,chrX,chrX	-,+,+	CDR1,RP1-177G6.2,RP1-177G6.2	70158,-3413,-3413
chr3:81815145-81815651	chr3	+	81815391	81815673	True	NM_001167674,NM_000158	chr3,chr3	+,-	CADM2,GBE1	3192459,-4441
chr17:79827911-79828146	chr17	+	79828007	79828191	True	NM_001185077,NM_001002244,NM_004309,NM_001185078,NM_000918	chr17,chr17,chr17,chr17,chr17	-,+,-,-,-	ARHGDIA,ANAPC11,ARHGDIA,ARHGDIA,P4HB	649,21407,1141,1141,-9463
chr15:60294022-60294488	chr15	+	60294088	60294350	True	NM_012182,NM_004330	chr15,chr15	+,-	FOXB1,BNIP2	2070,-312446
chr8:124252873-124253111	chr8	+	124252872	124253058	True	NM_032847,NM_207006	chr8,chr8	-,+	C8orf76,FAM83A	630,-58171
chr17:76252170-76252725	chr17	+	76252347	76252621	True	NR_002219,NM_001204210	chr17,chr17	-,+	EPR1,TMEM235	-31564,-25007
chr8:95274625-95275770	chr8	+	95274647	95275499	True	NM_005261,NM_181702,NM_001161778	chr8,chr8,chr8	-,-,+	GEM,GEM,PDP1	-100,-100,-344706
chr8:81078626-81078858	chr8	+	81078800	81078868	True	NM_005079,NM_001025253,NM_001105539	chr8,chr8,chr8	-,-,+	TPD52,TPD52,ZBTB10	5024,5024,319579
chr12:12765089-12765292	chr12	+	12765090	12765236	True	NM_001310,NM_030640	chr12,chr12	+,-	CREBL2,DUSP16	-310,-49642
chr2:172779997-172780828	chr2	+	172780206	172780611	True	NR_027862,NM_003705,NM_003642	chr2,chr2,chr2	+,-,+	HAT1,SLC25A12,HAT1	-1323,-29393,-1323
chr2:71221378-71221598	chr2	+	71221381	71221621	True	NM_144582,NM_024933	chr2,chr2	-,+	TEX261,ANKRD53	430,-15857
chr19:58445011-58445639	chr19	+	58445143	58445549	True	NM_133460,NR_036508	chr19,chr19	-,+	ZNF418,LOC100128398	1241,68712
chr21:33452216-33453275	chr21	+	33452275	33452847	True	NR_024352,NR_038033	chr21,chr21	+,-	NCRNA00159,NCRNA00159	31,5813
chr17:28563000-28563251	chr17	+	28563201	28563269	True	NR_029945,NM_001045	chr17,chr17	+,-	MIR423,SLC6A4	-119155,-247
chr5:157003163-157004394	chr5	+	157003195	157004416	True	NM_001145132,NM_033274	chr5,chr5	+,-	C5orf52,ADAM19	94144,-412
chr6:161414675-161415855	chr6	+	161414674	161415156	True	NM_006724,NR_024277,NM_005922	chr6,chr6,chr6	+,-,+	MAP3K4,NCRNA00241,MAP3K4	-1903,167916,-1903
chr6:31092666-31093579	chr6	+	31092751	31093521	True	NM_014068,NM_001264	chr6,chr6	+,-	PSORS1C1,CDSN	-10195,-4499
chr6:123878105-123878723	chr6	+	123878442	123878506	True	NM_001040214,NM_006073	chr6,chr6	+,-	NKAIN2,TRDN	246562,79486
chr14:39574076-39574481	chr14	+	39574230	39574463	True	NM_006364,NM_003616,NM_001009183,NM_001009182	chr14,chr14,chr14,chr14	-,+,+,+	SEC23A,SIP1,SIP1,SIP1	-1793,9024,9024,9024
chr1:155234028-155235072	chr1	+	155234054	155235036	True	NM_003993,NM_020897,NM_005698,NM_198264,NM_052837,NM_006589	chr1,chr1,chr1,chr1,chr1,chr1	-,+,-,-,-,-	CLK2,HCN3,SCAMP3,FAM189B,SCAMP3,FAM189B	8295,12337,-1859,-8780,-1859,-8780
chr3:148567104-148568179	chr3	+	148567104	148568064	True	NM_001870,NM_003071	chr3,chr3	+,-	CPA3,HLTF	14978,236327
chr16:56709401-56709636	chr16	+	56709430	56709684	True	NM_005952,NM_005950,NR_003669,NM_005951	chr16,chr16,chr16,chr16	+,-,+,+	MT1X,MT1G,MT1IP,MT1H	6697,-7453,-10,-5755
chr2:20425406-20425614	chr2	+	20425409	20425589	True	NM_004040,NM_002997,NM_001006946	chr2,chr2,chr2	+,-,-	RHOB,SDC1,SDC1	221245,-482,-215
chr1:40150466-40151271	chr1	+	40150577	40151087	True	NM_203456,NM_016257	chr1,chr1	+,-	PPIE,HPCAL4	53429,6060
chr4:88437836-88439535	chr4	+	88437966	88439169	True	NM_014208,NM_001128310	chr4,chr4	+,-	DSPP,SPARCL1	90511,11536
chr19:45445484-45446269	chr19	+	45445677	45445822	True	NM_001646,NM_145288,NR_037932,NM_000483	chr19,chr19,chr19,chr19	+,-,+,+	APOC4,ZNF296,APOC4-APOC2,APOC2	-233,133917,-233,3416
chr14:78263940-78264981	chr14	+	78264254	78264669	True	NM_020421,NM_012245,NM_001142545	chr14,chr14,chr14	+,-,+	ADCK1,SNW1,ADCK1	1756,-36757,1756
chr14:76040976-76041574	chr14	+	76041123	76041616	True	NM_017791,NM_007176	chr14,chr14	+,-	FLVCR2,C14orf1	3323,85973
chr16:3331086-3332056	chr16	+	3331310	3331816	True	NM_005741,NM_033208	chr16,chr16	+,-	ZNF263,TIGD7	1670,23673
chr14:62196147-62197502	chr14	+	62196237	62197476	True	NM_001017970,NM_003082	chr14,chr14	-,+	TMEM30B,SNAPC1	-447707,31598
chr16:80574940-80575279	chr16	+	80575001	80575267	True	NM_152342,NM_130897	chr16,chr16	-,+	CDYL2,DYNLRB2	262958,-198
chr11:57416433-57416956	chr11	+	57416532	57416998	True	NM_001142597,NR_029673,NM_145008,NM_006831	chr11,chr11,chr11,chr11	+,+,-,+	CLP1,MIR130A,YPEL4,CLP1	8217,-7912,469,8217
chr20:36148273-36148613	chr20	+	36148283	36148484	True	NM_005386,NM_001167821,NM_001167820,NM_001167823,NM_001167822,NM_006698,NM_181689	chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,-,-,-,-,-,+	NNAT,BLCAP,BLCAP,BLCAP,BLCAP,BLCAP,NNAT	1122,7701,7900,4520,7650,7900,1122
chr6:31082402-31083891	chr6	+	31082462	31083694	True	NM_014068,NM_001264,NM_014070	chr6,chr6,chr6	+,-,-	PSORS1C1,CDSN,C6orf15	95,4608,-2130
chr6:31082402-31083891	chr6_cox_hap2	+	2597834	2598398	False	NM_014068,NM_001264,NM_014070	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,-,-	PSORS1C1,CDSN,C6orf15	-573,4609,-2798
chr8:21918648-21919092	chr8	+	21918847	21919085	True	NM_001978,NM_024815,NM_001114135,NM_001114137,NM_001114136,NM_001114139,NM_001114138	chr8,chr8,chr8,chr8,chr8,chr8,chr8	+,-,+,+,+,+,+	EPB49,NUDT18,EPB49,EPB49,EPB49,EPB49,EPB49	-2212,47897,-3522,-7817,-6570,-6570,-2212
chr11:61130429-61130799	chr11	+	61130718	61130782	True	NM_001161452,NM_001161454,NM_153611,NM_016464,NR_028473	chr11,chr11,chr11,chr11,chr11	-,-,-,+,+	CYBASC3,CYBASC3,CYBASC3,TMEM138,TMEM138	-6357,-963,-963,-1299,-1299
chr5:158599218-158600407	chr5	+	158599797	158600446	True	NM_145049,NM_001199382	chr5,chr5	+,-	UBLCP1,RNF145	89642,34261
chr2:33177816-33178512	chr2	+	33177818	33178504	True	NM_206943,NM_015475	chr2,chr2	+,-	LTBP1,FAM98A	-5500,645908
chr20:48330503-48332327	chr20	+	48330945	48332353	True	NM_015266,NM_004776	chr20,chr20	+,-	SLC9A8,B4GALT5	96896,-524
chr8:38324040-38324625	chr8	+	38324064	38324643	True	NM_001174065,NM_001174064,NM_001174067,NM_001174066,NM_001174063,NM_023110,NM_023105,NM_015850,NM_023106,NM_001199660	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,-,-,-,-,-,+	FGFR1,FGFR1,FGFR1,FGFR1,FGFR1,FGFR1,FGFR1,FGFR1,FGFR1,LETM2	770,1759,770,770,1759,1759,1759,1759,1759,-79466
chr18:23670650-23670934	chr18	+	23670800	23670892	True	NM_001007559,NM_001025096,NM_005637	chr18,chr18,chr18	-,+,-	SS18,PSMA8,SS18	-189,42923,-189
chr13:78293007-78294525	chr13	+	78293006	78294553	True	NR_037438,NM_001040153,NM_144595	chr13,chr13,chr13	-,+,+	MIR3665,SLAIN1,SLAIN1	-20755,-20597,20741
chr12:14514809-14515997	chr12	+	14514918	14515758	True	NM_024829,NM_018179	chr12,chr12	-,+	PLBD1,ATF7IP	205091,2852
chr7:135193765-135194316	chr7	+	135193765	135194185	True	NM_001190847,NM_001190850,NM_001190849,NM_001190848,NM_001008225,NM_015135,NM_013316	chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,+,-	CNOT4,CNOT4,CNOT4,CNOT4,CNOT4,NUP205,CNOT4	740,740,740,740,740,48476,740
chr1:89871482-89872510	chr1	+	89871809	89872539	True	NM_052942,NR_003133	chr1,chr1	-,+	GBP5,GBP1P1	-133265,698
chr5:132148000-132148961	chr5	+	132148014	132148685	True	NM_175873,NM_133456	chr5,chr5	+,-	ANKRD43,SHROOM1	347,13367
chr9:130341877-130342435	chr9	+	130341883	130342353	True	NM_001032221,NM_001035534	chr9,chr9	+,-	STXBP1,FAM129B	32132,-615
chr7:76025526-76026558	chr7	+	76025629	76026399	True	NM_080744,NM_007155	chr7,chr7	-,+	SRCRB4D,ZP3	12675,441
chr19:47757470-47757821	chr19	+	47757486	47757680	True	NM_015603,NM_001127242	chr19,chr19	+,-	CCDC9,BBC3	2050,-21463
chr7:134137834-134138120	chr7	+	134137923	134138108	True	NM_001628,NM_020299	chr7,chr7	-,+	AKR1B1,AKR1B10	5831,74235
chr5:58825766-58826592	chr5	+	58825810	58826523	True	NM_006203,NM_138453	chr5,chr5	-,+	PDE4D,RAB3C	55857,-946922
chr19:10197179-10197522	chr19	+	10197486	10197548	True	NM_018381,NM_031917	chr19,chr19	+,-	C19orf66,ANGPTL6	-731,15927
chr19:58608825-58609337	chr19	+	58608829	58609335	True	NM_001145543,NM_007134,NM_001145544,NM_023926	chr19,chr19,chr19,chr19	-,+,-,-	ZSCAN18,ZNF135,ZSCAN18,ZSCAN18	445,-38273,445,445
chr19:21578143-21578519	chr19	+	21578246	21578562	True	NM_175910,NM_145326,NM_001076678,NM_021269	chr19,chr19,chr19,chr19	+,+,+,-	ZNF493,ZNF493,ZNF493,ZNF708	1358,1358,1358,-66034
chr2:45887724-45888412	chr2	+	45887723	45888272	True	NM_018079,NM_005400	chr2,chr2	-,+	SRBD1,PRKCE	-49290,-8731
chr12:104458751-104458984	chr12	+	104458852	104459012	True	NM_031302,NM_013320	chr12,chr12	-,+	GLT8D2,HCFC2	-14937,-667
chr11:130320128-130321752	chr11	+	130320254	130321700	True	NM_007037,NM_139055	chr11,chr11	-,+	ADAMTS8,ADAMTS15	-21715,-1436
chr1:190447419-190447907	chr1	+	190447528	190447779	True	NM_199051,NR_033922	chr1,chr1	-,+	FAM5C,LOC440704	-769,146240
chr17:66017058-66017392	chr17	+	66017356	66017408	True	NM_002266,NM_181656	chr17,chr17	+,-	KPNA2,C17orf58	14439,-27591
chr1:184924629-184925204	chr1	+	184924757	184925141	True	NM_052966,NM_007212	chr1,chr1	-,+	FAM129A,RNF2	18591,89409
chr12:93319928-93321583	chr12	+	93320366	93321599	True	NM_001004330,NM_003566	chr12,chr12	+,-	PLEKHG7,EEA1	-190153,1559
chr10:49451801-49452110	chr10	+	49451902	49451982	True	NM_001018071,NM_002750	chr10,chr10	-,+	FRMPD2,MAPK8	31021,157704
chr11:73360966-73362015	chr11	+	73361368	73361934	True	NM_001130036,NM_001130034,NM_001130035,NM_001130033,NM_021200,NM_015159	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,-	PLEKHB1,PLEKHB1,PLEKHB1,PLEKHB1,PLEKHB1,FAM168A	-1684,-2825,-2825,-4196,-4196,-52140
chr4:175444021-175445674	chr4	+	175444058	175445611	True	NM_000860,NR_036236,NR_027332,NM_001145816	chr4,chr4,chr4,chr4	-,+,-,-	HPGD,MIR4276,HPGD,HPGD	-266,-99163,-14,-266
chr6:150326571-150327259	chr6	+	150326590	150327159	True	NR_024045,NM_025218	chr6,chr6	-,+	RAET1K,ULBP1	-310,-41498
chrX:21875608-21877155	chrX	+	21875631	21876738	True	NM_014332,NM_206923	chrX,chrX	-,+	SMPX,YY2	-99401,-1577
chr19:44307070-44308283	chr19	+	44307090	44308331	True	NM_001031749,NM_181845	chr19,chr19	-,+	LYPD5,ZNF283	-477,23141
chr19:51335226-51336471	chr19	+	51335509	51336520	True	NM_138564,NM_001030050,NM_002257,NM_138563,NM_017509	chr19,chr19,chr19,chr19,chr19	-,+,-,-,-	KLK15,KLK3,KLK1,KLK15,KLK15	-730,21650,-8466,-730,-730
chr12:133465798-133466031	chr12	+	133465882	133466044	True	NM_018223,NM_019591,NM_001161346,NM_001161347,NM_001161344,NM_001161345	chr12,chr12,chr12,chr12,chr12,chr12	-,+,-,-,-,-	CHFR,ZNF26,CHFR,CHFR,CHFR,CHFR	-1678,97011,-1678,-1678,-1678,-1678
chr15:59695046-59695480	chr15	+	59695161	59695339	True	NM_152450,NM_004998	chr15,chr15	+,-	FAM81A,MYO1E	35032,-30090
chr1:26232677-26232924	chr1	+	26232873	26232967	True	NR_037481,NM_203401,NM_001145454,NM_005563,NM_001099626,NM_203399	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,+,-	MIR3917,STMN1,STMN1,STMN1,FAM54B,STMN1	28,-229,76,76,-85605,451
chrX:51068692-51070685	chrX	+	51068746	51070695	True	NM_018159,NM_153183	chrX,chrX	-,+	NUDT11,NUDT10	168825,4387
chr1:46268732-46268977	chr1	+	46268754	46268978	True	NM_005897,NM_015112	chr1,chr1	-,+	IPP,MAST2	-52269,306
chr9:95099347-95100485	chr9	+	95099813	95100241	True	NR_024020,NM_001012267	chr9,chr9	-,+	NOL8,CENPP	-11937,-12133
chr17:8769569-8769874	chr17	+	8769859	8769919	True	NM_004822,NM_001010855	chr17,chr17	+,-	NTN1,PIK3R6	154939,1125
chr19:4902948-4903415	chr19	+	4902980	4903044	True	NM_001080523,NM_001048201,NM_013282	chr19,chr19,chr19	-,+,+	ARRDC5,UHRF1,UHRF1	-101,6465,7521
chr5:141258136-141258494	chr5	+	141258191	141258543	True	NM_001142603,NM_032420,NM_002587	chr5,chr5,chr5	+,-,-	KIAA0141,PCDH1,PCDH1	44841,-247,-247
chr1:213181620-213183315	chr1	+	213181619	213182883	True	NM_144567,NM_001136138	chr1,chr1	-,+	ANGEL2,RPS6KC1	6336,41704
chr3:38798603-38800190	chr3	+	38798746	38799896	True	NM_005107,NM_006514	chr3,chr3	+,-	EXOG,SCN10A	-261041,35657
chr10:18940762-18942459	chr10	+	18940892	18942301	True	NM_178815,NM_182543	chr10,chr10	+,-	ARL5B,NSUN6	6011,-342
chr10:125429290-125430053	chr10	+	125429408	125430088	True	NM_198148,NM_153442	chr10,chr10	-,+	CPXM2,GPR26	221462,-3588
chr19:44308908-44310229	chr19	+	44309073	44309647	True	NM_001031749,NM_181845	chr19,chr19	-,+	LYPD5,ZNF283	-2460,21825
chrX:1711302-1711556	chrY	+	1661465	1661605	False	NM_005088,NR_027383,NM_004043,NM_178129	chrY,chrY,chrY,chrY	+,+,+,-	AKAP17A,AKAP17A,ASMT,P2RY8	-1030,-1030,2742,-55428
chrX:1711302-1711556	chrX	+	1711465	1711605	True	NM_005088,NR_027383,NM_004043,NM_178129	chrX,chrX,chrX,chrX	+,+,+,-	AKAP17A,AKAP17A,ASMT,P2RY8	-1030,-1030,2742,-55428
chr2:190537182-190539043	chr2	+	190537326	190538852	True	NM_144708,NM_022353	chr2,chr2	+,-	ANKAR,OSGEPL1	1858,89122
chrX:47518118-47518430	chrX	+	47518122	47518446	True	NM_005229,NR_028119,NM_004182,NR_027444,NM_153477,NM_001114123	chrX,chrX,chrX,chrX,chrX,chrX	-,+,-,+,-,-	ELK1,LOC100133957,UXT,LOC100133957,UXT,ELK1	-8119,-35,164,-15,120,-8119
chr1:156552951-156553257	chr1	+	156552951	156553251	True	NM_144772,NM_178229,NM_001105669	chr1,chr1,chr1	+,-,+	APOA1BP,IQGAP3,TTC24	8306,-10555,-3483
chr3:25469692-25469912	chr3	+	25469692	25469956	True	NM_016152,NM_000965,NM_001068	chr3,chr3,chr3	+,+,-	RARB,RARB,TOP2B	11,43,235882
chr15:65337915-65338223	chr15	+	65337963	65338229	True	NM_178859,NM_139242	chr15,chr15	+,-	OSTBETA,MTFMT	-306,-15986
chr16:46781585-46781879	chr16	+	46781597	46781831	True	NM_182493,NR_037620	chr16,chr16	-,+	MYLK3,ORC6	440,-58090
chr6:49990864-49991165	chr6	+	49991089	49991165	True	NM_001037497,NM_001037728,NM_001145652	chr6,chr6,chr6	-,-,+	DEFB110,DEFB110,C6orf141	-1395,-1395,-473035
chr8:37823989-37824763	chr8	+	37824247	37824613	True	NM_000025,NM_004095	chr8,chr8	-,+	ADRB3,EIF4EBP1	-63,63406
chr19:45843658-45843942	chr19	+	45843673	45843891	True	NM_177417,NM_001824	chr19,chr19	+,-	KLC3,CKM	106,-17440
chr1:33367302-33367592	chr1	+	33367409	33367515	True	NM_033504,NM_002143	chr1,chr1	-,+	TMEM54,HPCA	-456,-15362
chr17:72933364-72933630	chr17	+	72933382	72933630	True	NM_178233,NM_173477	chr17,chr17	+,-	OTOP3,USH1G	-1549,-14031
chr16:56657242-56658392	chr16	+	56657449	56658406	True	NM_175617,NM_176870,NR_001447,NM_005950	chr16,chr16,chr16,chr16	+,+,+,-	MT1E,MT1M,MT1L,MT1G	1178,8127,-6127,43622
chr15:85430930-85431141	chr15	+	85430935	85431179	True	NM_201651,NM_004213,NM_014300	chr15,chr15,chr15	+,+,-	SLC28A1,SLC28A1,SEC11A	-3073,-3073,-171261
chr16:30761549-30762413	chr16	+	30761593	30762335	True	NM_001172432,NM_000294,NM_001014979	chr16,chr16,chr16	+,+,-	PHKG2,PHKG2,C16orf93	-2031,-2031,11280
chr19:17632069-17632691	chr19	+	17632068	17632128	True	NM_012088,NM_001098524,NM_173544,NM_138454	chr19,chr19,chr19,chr19	+,+,+,-	PGLS,FAM129C,FAM129C,NXNL1	-9687,1981,1981,-60343
chr17:18418977-18420669	chr17	+	18419198	18420618	True	NR_026809,NR_003554,NM_001040078	chr17,chr17,chr17	-,-,+	FAM106A,LOC220594,LGALS9C	9592,3998,-39155
chr17:18418977-18420669	chr17	-	16701724	16701774	False	NR_026810,NR_029392	chr17,chr17	+,-	FAM106C,KRT16P2	-9718,34423
chr17:18418977-18420669	chr17	-	20330272	20330322	False	NR_023380,NM_001042685	chr17,chr17	+,-	CCDC144C,LGALS9B	-105836,40576
chr15:41578589-41580226	chr15	+	41579104	41580108	True	NM_007280,NR_026757	chr15,chr15	-,+	OIP5,LOC729082	44771,-2963
chr20:18480494-18481980	chr20	+	18480633	18481704	True	NM_006606,NM_006363,NM_032986,NM_032985,NM_001172746,NM_001172745	chr20,chr20,chr20,chr20,chr20,chr20	-,+,+,+,+,+	RBBP9,SEC23B,SEC23B,SEC23B,SEC23B,SEC23B	-2746,6483,6483,6483,6505,6902
chr12:25073761-25075336	chr12	+	25073771	25075340	True	NM_001204126,NM_001178093	chr12,chr12	+,-	LRMP,BCAT1	129840,-17762
chr3:159709361-159709803	chr3	+	159709363	159709819	True	NM_000882,NM_001190242	chr3,chr3	+,-	IL12A,IFT80	-2802,391785
chr19:50938747-50939074	chr19	+	50938846	50939122	True	NM_004533,NM_138411	chr19,chr19	+,-	MYBPC2,FAM71E1	-2737,40931
chr14:32026905-32027638	chr14	+	32027006	32027674	True	NR_036675,NM_025152	chr14,chr14	-,+	GPR33,NUBPL	-69855,2916
chr3:138313384-138315012	chr3	+	138313665	138314931	True	NM_001033030,NM_024491	chr3,chr3	+,-	FAIM,CEP70	12610,-536
chr4:93224776-93225065	chr4	+	93224782	93225042	True	NM_183049,NM_001510	chr4,chr4	-,+	TMSL3,GRID2	-1464513,507
chr5:1590157-1590366	chr5	+	1590189	1590249	True	NR_003263,NM_004553	chr5,chr5	-,+	SDHAP3,NDUFS6	4447,211246
chr15:85360972-85361943	chr15	+	85361038	85361988	True	NM_014300,NM_020778	chr15,chr15	-,+	SEC11A,ALPK3	-101364,-1178
chr22:19110225-19110455	chr22	+	19110225	19110465	True	NM_053006,NM_005137,NM_001173533,NM_001184781,NM_001173534,NR_033674	chr22,chr22,chr22,chr22,chr22,chr22	+,-,-,-,-,-	TSSK2,DGCR2,DGCR2,DGCR2,DGCR2,DGCR2	7855,-258,-258,-258,-258,-258
chr12:57330429-57332324	chr12	+	57330724	57332088	True	NM_148897,NM_007264	chr12,chr12	-,+	SDR9C7,GPR182	-2535,56266
chr9:130361142-130361852	chr9	+	130361296	130361853	True	NM_001032221,NM_001035534	chr9,chr9	+,-	STXBP1,FAM129B	12632,-20028
chr2:9772842-9774086	chr2	+	9772917	9773839	True	NM_006826,NM_001039613	chr2,chr2	-,+	YWHAQ,IAH1	-1811,-158298
chr14:63547297-63547782	chr14	+	63547745	63547811	True	NM_172376,NM_020663	chr14,chr14	-,+	KCNH5,RHOJ	20823,123333
chr20:34130707-34132644	chr20	+	34130741	34132393	True	NM_015966,NM_198398,NM_001145350	chr20,chr20,chr20	+,+,-	ERGIC3,ERGIC3,C20orf173	-1015,-1015,-13260
chr17:73257841-73258162	chr17	+	73257842	73258210	True	NM_015971,NR_036520,NM_001172703,NM_001172704,NM_138619,NM_020679,NR_033345,NM_014001	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,-,-,-,-,-,-	MRPS7,LOC100287042,GGA3,GGA3,GGA3,MIF4GD,GGA3,GGA3	-144,9169,284,284,-135,9143,-135,-135
chr21:34697959-34698668	chr21	+	34697961	34698504	True	NM_000629,NM_006134	chr21,chr21	+,-	IFNAR1,TMEM50B	-798,153833
chrX:13718713-13720270	chrX	+	13718712	13720126	True	NM_004251,NM_001011658	chrX,chrX	+,-	RAB9A,TRAPPC2	-11530,32678
chr5:177592723-177592959	chr5	+	177592730	177592958	True	NM_022762,NM_017838	chr5,chr5	+,-	RMND5B,NHP2	-34753,-11769
chr18:14336383-14336742	chr13	-	19318244	19318294	True	NR_027995,NR_026852	chr13,chr13	-,+	LOC284232,LOC348021	127865,264104
chr1:38269502-38270000	chr1	+	38269511	38270019	True	NM_001113482,NM_198446,NM_024640,NM_001031740,NM_001142726,NM_152496	chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,+,+,+	MANEAL,C1orf122,YRDC,MANEAL,C1orf122,MANEAL	-9788,3453,3896,-9788,3453,-8402
chr3:125633381-125634450	chr3	+	125633845	125634455	True	NM_001015050,NR_024251,NR_024250	chr3,chr3,chr3	-,+,+	ALG1L,LOC100125556,LOC100125556	21482,988,988
chr7:96338420-96338877	chr7	+	96338419	96338733	True	NM_005222,NM_006304	chr7,chr7	+,-	DLX6,SHFM1	296556,520
chr12:8684848-8686705	chr12	+	8684867	8686735	True	NM_014358,NM_080387	chr12,chr12	-,+	CLEC4E,CLEC4D	6873,-18782
chr7:73273788-73274693	chr7	+	73273788	73274579	True	NM_152559,NM_182504	chr7,chr7	-,+	WBSCR27,WBSCR28	-16933,909
chrX:134458631-134459349	chrX	+	134458672	134459077	True	NM_007131,NM_152695	chrX,chrX	-,+	ZNF75D,ZNF449	-28707,19618
chr14:71108088-71108474	chr14	+	71108093	71108418	True	NM_015351,NM_005466	chr14,chr14	+,-	TTC9,MED6	85,-40709
chr5:175108227-175109905	chr5	+	175108276	175109881	True	NM_022304,NM_000794	chr5,chr5	+,-	HRH2,DRD1	137,-237113
chr16:22022096-22023475	chr16	+	22022439	22023228	True	NR_033694,NM_001164579	chr16,chr16	-,+	PDZD9,C16orf52	-10008,-3034
chr19:24270416-24271170	chr19	+	24270565	24271127	True	NM_203282,NR_003603	chr19,chr19	+,-	ZNF254,LOC100101266	-647,75178
chr7:69063996-69064228	chr7	+	69064006	69064277	True	NM_001127231,NM_001127232,NM_015570,NR_037477	chr7,chr7,chr7,chr7	+,+,+,-	AUTS2,AUTS2,AUTS2,MIR3914-1	-152,-151,-151,1708529
chr16:3931836-3932137	chr16	+	3931838	3931962	True	NM_005223,NM_004380,NM_001079846	chr16,chr16,chr16	+,-,-	DNASE1,CREBBP,CREBBP	-228949,-1717,-1717
chr13:107189021-107190656	chr13	+	107189087	107190660	True	NM_004093,NR_034119	chr13,chr13	-,+	EFNB2,LOC728192	-1699,-160236
chr10:74936143-74936363	chr10	+	74936195	74936343	True	NR_024203,NM_173348,NM_007265,NM_001135752,NM_001135753	chr10,chr10,chr10,chr10,chr10	-,+,-,-,-	ECD,FAM149B1,ECD,ECD,ECD	-8342,-8382,-8342,-8342,-8342
chr12:5601926-5602391	chr12	+	5601987	5602432	True	NM_020373,NM_002527	chr12,chr12	-,+	ANO2,NTF3	453016,865
chr5:79291476-79292238	chr5	+	79291507	79292286	True	NM_003248,NM_001010891,NM_001167741	chr5,chr5,chr5	+,-,-	THBS4,MTX3,MTX3	38883,-4419,-4419
chr7:94536486-94536808	chr7	+	94536547	94536703	True	NM_003919,NM_001166161,NM_001166163,NM_001166162,NM_017650,NM_001166160	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,+,+	SGCE,PPP1R9A,PPP1R9A,PPP1R9A,PPP1R9A,PPP1R9A	-251026,2506,2506,2506,245,245
chr15:35589096-35590416	chr15	+	35589191	35590431	True	NR_003144,NR_037507	chr15,chr15	+,-	LOC723972,MIR3942	-59715,74184
chr9:114286191-114286767	chr9	+	114286237	114286711	True	NM_001007169,NM_001080398,NM_133464	chr9,chr9,chr9	+,-,+	ZNF483,KIAA0368,ZNF483	735,-39212,735
chr2:111436200-111437031	chr2	+	111436225	111436762	True	NM_004336,NM_001142807	chr2,chr2	-,+	BUB1,ACOXL	-541,53387
chr5:134076376-134076972	chr5	+	134076584	134076958	True	NM_001745,NM_016103	chr5,chr5	+,-	CAMLG,SAR1B	-2469,-108051
chr6:20404340-20404564	chr6	+	20404506	20404572	True	NM_001949,NM_001080480	chr6,chr6	+,-	E2F3,MBOAT1	-2427,-191836
chr3:158517980-158519546	chr3	+	158518105	158519483	True	NM_002888,NM_001167903,NM_022736	chr3,chr3,chr3	-,+,+	RARRES1,MFSD1,MFSD1	-67830,231,231
chr9:80793399-80794156	chr9	+	80793612	80794186	True	NM_001098802,NM_002072	chr9,chr9	+,-	CEP78,GNAQ	56804,-147393
chr11:62648478-62648718	chr11	+	62648495	62648657	True	NR_037193,NR_003098,NM_001013251	chr11,chr11,chr11	+,-,+	SLC3A2,SNHG1,SLC3A2	513,-25135,-202
chr11:393568-393948	chr11	+	393638	393990	True	NM_007183,NM_001135054	chr11,chr11	+,-	PKP3,SIGIRR	226,21059
chr19:23945016-23945747	chr19	+	23945122	23945665	True	NM_138286,NR_003662	chr19,chr19	-,+	ZNF681,RPSAP58	-3429,150
chr8:121425639-121426664	chr8	+	121425748	121426693	True	NM_022045,NM_014078	chr8,chr8	+,-	MTBP,MRPL13	30972,31005
chr20:44047188-44048057	chr20	+	44047190	44047970	True	NM_001184729,NM_001184728,NM_015937,NM_014477,NM_001184730	chr20,chr20,chr20,chr20,chr20	+,+,+,-,+	PIGT,PIGT,PIGT,TP53TG5,PIGT	-2534,-2534,-2534,-40233,-2534
chr11:62446759-62447124	chr11	+	62446781	62447024	True	NM_015853,NM_001085372,NM_024099	chr11,chr11,chr11	-,+,-	UBXN1,C11orf83,C11orf48	-254,-7707,-7540
chr3:131181087-131181591	chr3	+	131181132	131181620	True	NR_002985,NR_033268	chr3,chr3	-,+	SNORA58,NUDT16	16507,-80562
chr19:1652715-1653083	chr19	+	1652871	1652981	True	NM_001136139,NM_003200,NM_001080488	chr19,chr19,chr19	-,-,+	TCF3,TCF3,ONECUT3	-2585,-545,100680
chr2:106690024-106690435	chr2	+	106690072	106690388	True	NM_025076,NM_032411	chr2,chr2	-,+	UXS1,C2orf40	120457,-8011
chr19:36498498-36499035	chr19	+	36499000	36499064	True	NM_198867,NM_032878,NM_001039876,NM_001042631	chr19,chr19,chr19,chr19	-,-,-,+	ALKBH6,ALKBH6,C19orf46,SDHAF1	6127,6127,658,-12961
chr1:164528278-164528558	chr1	+	164528363	164528441	True	NM_002585,NM_001174069,NM_001204963,NM_001204961	chr1,chr1,chr1,chr1	+,-,+,+	PBX1,LMX1A,PBX1,PBX1	155,797087,155,155
chr17:21825702-21827353	chr17	+	21825906	21827164	True	NM_001113434,NR_028336	chr17,chr17	-,+	C17orf51,FAM27L	-370965,-587
chr14:77229352-77231328	chr14	+	77229597	77231376	True	NM_015305,NM_014909	chr14,chr14	-,+	ANGEL1,VASH1	47957,-1413
chr14:23057580-23057950	chr14	+	23057587	23057999	True	NM_022060,NM_001344	chr14,chr14	+,-	ABHD4,DAD1	9147,194
chr9:116321601-116322837	chr9	+	116321816	116322624	True	NM_017443,NM_134427	chr9,chr9	-,+	POLE3,RGS3	-148787,4736
chr1:78149292-78150363	chr1	+	78149376	78150044	True	NM_015534,NM_198549	chr1,chr1	-,+	ZZZ3,FAM73A	-1033,95264
chr19:20999570-21001512	chr19	+	20999570	21001247	True	NR_034060,NM_145297	chr19,chr19	+,-	ZNF85,ZNF626	104811,-155168
chr3:133123357-133124885	chr3	+	133123596	133124634	True	NM_003571,NM_007027	chr3,chr3	+,-	BFSP2,TOPBP1	-4858,256155
chr3:36949248-36949455	chr3	+	36949290	36949426	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	37174,85414
chr6:109421597-109422913	chr6	+	109421902	109422788	True	NM_014454,NM_001083535	chr6,chr6	-,+	SESN1,CEP57L1	-6194,-5603
chr1:224540603-224541304	chr1	+	224540830	224541352	True	NM_014184,NM_206840	chr1,chr1	+,-	CNIH4,NVL	3242,-22958
chr3:56694183-56695409	chr3	+	56694546	56695200	True	NR_024460,NM_015224	chr3,chr3	+,-	CCDC66,C3orf63	-103416,2934
chr5:43190049-43191625	chr5	+	43190307	43191519	True	NM_153361,NR_034127,NM_001098272	chr5,chr5,chr5	+,-,-	MGC42105,LOC100132356,HMGCS1	807,-123234,122126
chr11:120207624-120208015	chr11	+	120207667	120208011	True	NM_012101,NM_001198665,NM_015313	chr11,chr11,chr11	-,+,+	TRIM29,ARHGEF12,ARHGEF12	-198804,-100,-100
chr4:110736640-110736957	chr4	+	110736639	110736997	True	NM_018983,NM_000204,NM_032993	chr4,chr4,chr4	+,-,+	GAR1,CFI,GAR1	-24,-13304,-24
chr18:14132805-14133044	chr18	+	14132804	14132945	True	NR_033354,NR_026756,NM_145287	chr18,chr18,chr18	-,+,-	ZNF519,LOC284233,ZNF519	-315,204476,-315
chr18:14132805-14133044	chr21	-	15399332	15399388	False	NR_027270,NM_144770	chr21,chr21	-,+	C21orf81,RBM11	-46567,189077
chr6:167734877-167735666	chr6	+	167735136	167735616	True	NM_004610,NM_031949	chr6,chr6	-,+	TCP10,TTLL2	62432,2957
chr6:13816540-13817406	chr6	+	13816730	13817368	True	NM_001165034,NM_001031713	chr6,chr6	+,-	RNF182,CCDC90A	107308,-1941
chr1:41849134-41849411	chr1	+	41849137	41849437	True	NM_001956,NR_037868	chr1,chr1	-,+	EDN2,LOC100507178	100957,-368926
chr13:22171924-22172777	chr13	+	22172122	22172587	True	NM_152726,NM_002010	chr13,chr13	-,+	EFHA1,FGF9	5822,72627
chr17:55055697-55056616	chr17	+	55055801	55056430	True	NM_021626,NM_004645	chr17,chr17	+,-	SCPEP1,COIL	-384,-17390
chr2:95522194-95522625	chr2	+	95522360	95522430	True	NR_003366,NM_144705	chr2,chr2	-,+	ANKRD20A8P,TEKT4	446,14801
chr21:41025493-41027363	chr21	+	41025514	41027306	True	NR_026543,NM_006057,NM_033171,NM_033170,NM_033173,NM_033172	chr21,chr21,chr21,chr21,chr21,chr21	-,+,+,+,+,+	C21orf88,B3GALT5,B3GALT5,B3GALT5,B3GALT5,B3GALT5	-40765,1947,1947,1947,1947,1947
chrX:152866200-152866979	chrX	+	152866227	152867011	True	NM_001130997,NM_152274,NM_001395	chrX,chrX,chrX	-,-,+	FAM58A,FAM58A,DUSP9	-1595,-1595,40885
chr11:66725009-66725542	chr11	+	66725113	66725461	True	NM_000920,NM_001136485,NM_001040716	chr11,chr11,chr11	-,+,-	PC,C11orf86,PC	436,17292,436
chr19:15235929-15236235	chr19	+	15235948	15236216	True	NM_006844,NM_033025	chr19,chr19	-,+	ILVBL,SYDE1	411,-17785
chr8:90981899-90982688	chr8	+	90982577	90982706	True	NM_002485,NM_001359	chr8,chr8	-,+	NBN,DECR1	14248,30873
chr19:17499666-17500538	chr19	+	17499986	17500494	True	NM_138401,NM_031310	chr19,chr19	+,-	FAM125A,PLVAP	30417,-11849
chr3:197793220-197795073	chr3	+	197793241	197794959	True	NR_003291,NM_001145248	chr3,chr3	-,+	LOC348840,FAM157A	12642,84277
chr5:60616049-60617182	chr5	+	60616129	60617220	True	NM_001048249,NM_020928	chr5,chr5	-,+	C5orf43,ZSWIM6	-157827,10879
chr1:38229764-38229978	chr1	+	38229850	38230026	True	NM_001031740,NM_001099439,NM_173641	chr1,chr1,chr1	+,-,-	MANEAL,EPHA10,EPHA10	29747,848,848
chr19:47139699-47141147	chr19	+	47139852	47141181	True	NM_033258,NM_005184	chr19,chr19	-,+	GNG8,CALM3	-1913,-35391
chrY:535091-535303	chrY	+	535137	535257	True	NM_006883,NM_000451,NM_013239	chrY,chrY,chrY	+,+,-	SHOX,SHOX,PPP2R3B	-112,-112,-237447
chrY:535091-535303	chrX	+	585137	585257	False	NM_006883,NM_000451,NM_013239	chrX,chrX,chrX	+,+,-	SHOX,SHOX,PPP2R3B	-112,-112,-237447
chr1:15932373-15933143	chr1	+	15932405	15933181	True	NM_032341,NM_024758	chr1,chr1	+,-	DDI2,AGMAT	10771,-20800
chr15:68724590-68725185	chr15	+	68724745	68725121	True	NM_006091,NM_001004439	chr15,chr15	+,-	CORO2B,ITGA11	146451,-253
chr1:177935791-177936341	chr1	+	177935983	177936363	True	NM_170692,NM_033127	chr1,chr1	+,-	RASAL2,SEC16B	126500,2737
chr19:50709422-50709721	chr19	+	50709584	50709739	True	NM_024729,NM_001145809,NM_001077186,NM_152358	chr19,chr19,chr19,chr19	+,+,+,-	MYH14,MYH14,MYH14,IZUMO2	-2750,-2750,-2750,-43046
chr19:38758410-38758875	chr19	+	38758417	38758847	True	NM_021102,NM_033256,NM_001166103	chr19,chr19,chr19	+,-,+	SPINT2,PPP1R14A,SPINT2	-3370,-11245,-3370
chr12:132436018-132436412	chr12	+	132436017	132436082	True	NM_015409,NM_175066	chr12,chr12	+,-	EP400,DDX51	-1560,192853
chr4:5896273-5896491	chr4	+	5896294	5896464	True	NM_001313,NM_153717,NM_001014809	chr4,chr4,chr4	-,+,-	CRMP1,EVC,CRMP1	-5979,-183421,-1509
chr1:11861525-11862828	chr1	+	11861533	11862778	True	NM_001286,NM_021735,NM_021736,NM_021737,NM_005957	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	CLCN6,CLCN6,CLCN6,CLCN6,MTHFR	3428,3428,3428,3428,3433
chr1:226372590-226372840	chr1	+	226372768	226372892	True	NM_022735,NM_031944	chr1,chr1	-,+	ACBD3,MIXL1	1585,38490
chr3:139395954-139396291	chr3	+	139396019	139396315	True	NM_001200047,NM_178177,NM_022131	chr3,chr3,chr3	-,-,+	NMNAT3,NMNAT3,CLSTN2	620,620,257711
chr2:136595319-136596201	chr2	+	136595878	136596188	True	NM_002299,NM_014607	chr2,chr2	-,+	LCT,UBXN4	-1128,-96743
chr10:91175045-91175464	chr10	+	91175052	91175500	True	NM_213606,NM_012420	chr10,chr10	-,+	SLC16A12,IFIT5	119863,-778
chr19:53193872-53194660	chr19	+	53193918	53194705	True	NR_003936,NR_023311	chr19,chr19	-,+	ZNF83,ZNF137P	-32,-94032
chr19:59025592-59025802	chr19	+	59025593	59025725	True	NM_012254,NM_032792,NM_005762	chr19,chr19,chr19	-,-,+	SLC27A5,ZBTB45,TRIM28	-2161,5246,30110
chr15:52475068-52476247	chr15	+	52475354	52476264	True	NM_006578,NM_016194,NM_002748	chr15,chr15,chr15	-,-,+	GNB5,GNB5,MAPK6	-3192,7351,-163994
chr3:49159684-49160082	chr3	+	49159741	49160097	True	NM_001199161,NM_001199160,NM_001199162,NM_173546,NM_006677	chr3,chr3,chr3,chr3,chr3	-,-,-,+,-	USP19,USP19,USP19,KLHDC8B,USP19	-1370,-1370,-1370,48920,-1370
chr3:38992198-38992422	chr3	+	38992216	38992468	True	NM_020839,NM_014139	chr3,chr3	+,-	WDR48,SCN11A	101038,-164
chr15:75575920-75576726	chr15	+	75576043	75576710	True	NR_030360,NM_001145224	chr15,chr15	-,+	MIR631,GOLGA6D	69373,-912
chr15:75575920-75576726	chr15	-	78218290	78218340	False	NM_001101404,NR_027024	chr15,chr15	+,-	SH2D7,LOC645752	166586,898
chr15:75575920-75576726	chr15	+	72947905	72948572	False	NR_002780,NM_018652	chr15,chr15	-,+	HIGD2B,GOLGA6B	29975,-918
chr15:75575920-75576726	chr15	-	74373356	74374023	False	NM_001130136,NM_001038640	chr15,chr15	+,-	ISLR2,GOLGA6A	47691,918
chr15:75575920-75576726	chr15	+	75551766	75552433	False	NR_030360,NM_001164404	chr15,chr15	-,+	MIR631,GOLGA6C	93650,-918
chr17:62832136-62833049	chr17	+	62832305	62832693	True	NR_024386,NM_001165933	chr17,chr17	-,+	PLEKHM1P,RGS9	659,300762
chr4:77171977-77172697	chr4	+	77172240	77172714	True	NM_005506,NM_001136570	chr4,chr4	-,+	SCARB2,FAM47E	-37188,138
chr1:53023531-53023779	chr1	+	53023620	53023683	True	NM_001009881,NM_015696,NM_015269	chr1,chr1,chr1	-,+,-	ZCCHC11,GPX7,ZCCHC11	-4858,44359,-4858
chr2:198246315-198247091	chr2	+	198246455	198246792	True	NM_025147,NM_012433	chr2,chr2	+,-	COQ10B,SF3B1	71438,53030
chr6:41031181-41032711	chr6	+	41031656	41032748	True	NM_021705,NM_145063,NM_002505	chr6,chr6,chr6	+,-,+	NFYA,C6orf130,NFYA	7958,7490,7958
chr6:76699279-76701030	chr6	+	76699585	76700740	True	NM_001563,NM_004999	chr6,chr6	-,+	IMPG1,MYO6	81652,-240739
chr14:24024500-24025258	chr14	+	24024526	24025141	True	NR_023314,NM_024328,NM_033400,NM_001126339	chr14,chr14,chr14,chr14	+,+,-,+	THTPA,THTPA,ZFHX2,THTPA	56,56,-3668,56
chr12:1731435-1732407	chr12	+	1731567	1732346	True	NM_032642,NM_030775,NM_152441	chr12,chr12,chr12	+,+,-	WNT5B,WNT5B,FBXL14	6065,-5406,-28236
chr2:91965711-91966801	chr22	+	25014620	25014670	True	NM_207644,NM_001032365	chr22,chr22	-,+	C22orf36,GGT1	-25585,-11045
chr11:33799531-33799775	chr11	+	33799544	33799764	True	NM_012175,NM_033406,NM_012194	chr11,chr11,chr11	-,-,+	FBXO3,FBXO3,C11orf41	-3473,-3473,-235718
chr9:101560088-101561561	chr9	+	101561095	101561561	True	NM_173551,NM_024642	chr9,chr9	-,+	ANKS6,GALNT12	-2301,8419
chr19:58864920-58865162	chr19	+	58864956	58865122	True	NM_198458,NM_130786,NR_015380	chr19,chr19,chr19	-,-,+	ZNF497,A1BG,A1BG-AS1	9048,-91,-1671
chr14:35407873-35408225	chr14	+	35408031	35408273	True	NR_002937,NM_182648	chr14,chr14	+,-	C14orf19,BAZ1A	854,-63178
chr6:167659329-167659700	chr6	+	167659332	167659452	True	NM_005299,NM_001143947	chr6,chr6	-,+	GPR31,UNC93A	-88013,45350
chr20:30458639-30460336	chr20	+	30458731	30460074	True	NM_001012644,NM_177991,NM_001008409,NM_080611	chr20,chr20,chr20,chr20	-,-,+,-	DUSP15,DUSP15,TTLL9,DUSP15	-930,-720,-277,-252
chr5:141991981-141992881	chr5	+	141992076	141992888	True	NM_001144892,NM_001135608,NM_033137	chr5,chr5,chr5	-,+,-	FGF1,ARHGAP26,FGF1	8069,157403,888
chr6:36362895-36364297	chr6	+	36363082	36363930	True	NM_016135,NM_173562	chr6,chr6	-,+	ETV7,KCTD20	-7615,46613
chr3:142290114-142290699	chr3	+	142290355	142290486	True	NM_001184,NM_001145319	chr3,chr3	-,+	ATR,PLS1	7241,24742
chr15:32940804-32941063	chr15	+	32940818	32940912	True	NM_003020,NR_036650,NM_001144757	chr15,chr15,chr15	+,-,+	SCG5,LOC100288615,SCG5	-6999,-114876,-6999
chr14:21560716-21561400	chr14	+	21560903	21561413	True	NM_016423,NM_001101672,NM_001146683	chr14,chr14,chr14	-,-,+	ZNF219,ZNF219,C14orf176	5445,5810,5682
chr4:71706334-71708243	chr4	+	71706495	71708069	True	NM_001098477,NM_173468,NM_002092	chr4,chr4,chr4	-,+,-	GRSF1,MOBKL1A,GRSF1	-1275,59994,-868
chr17:7789299-7789536	chr17	+	7789385	7789575	True	NM_032356,NM_005852,NM_001005273,NM_001005271	chr17,chr17,chr17,chr17	-,+,+,+	LSMD1,CHD3,CHD3,CHD3	-28213,2593,2593,-1313
chr11:116969392-116970977	chr11	+	116969645	116970693	True	NM_025164,NM_002572	chr11,chr11	-,+	SIK3,PAFAH1B2	-652,44306
chr2:243031319-243031521	chr2	+	243031322	243031564	True	NM_005018	chr2	-	PDCD1	-230264
chr2:243031319-243031521	chr8	+	357562	357622	False	NM_175075,NM_183420,NM_183421,NM_012173	chr8,chr8,chr8,chr8	-,+,+,+	C8orf42,FBXO25,FBXO25,FBXO25	137759,-805,-805,-805
chr1:6260705-6262703	chr1	+	6260826	6262169	True	NM_000983,NM_207396	chr1,chr1	-,+	RPL22,RNF207	-1147,4019
chr12:6377243-6377849	chr12	+	6377458	6377866	True	NM_018173,NM_001065	chr12,chr12	+,-	PLEKHG6,TNFRSF1A	41735,73467
chr9:71940676-71941305	chr9	+	71940812	71941338	True	NM_001127608,NM_004816,NM_002732	chr9,chr9,chr9	+,+,-	FAM189A2,FAM189A2,PRKACG	-1375,2902,-311773
chr6:109762825-109764402	chr6	+	109762958	109764377	True	NM_173672,NM_003080,NM_001111298	chr6,chr6,chr6	-,+,-	PPIL6,SMPD2,PPIL6	-584,-1078,-584
chr22:20011425-20011939	chr22	+	20011754	20011936	True	NM_152906,NR_029706,NM_001670	chr22,chr22,chr22	+,+,-	C22orf25,MIR185,ARVCF	-3174,8725,-7445
chr2:166194089-166194861	chr2	+	166194106	166194586	True	NM_006922,NM_001040143	chr2,chr2	-,+	SCN3A,SCN2A	-133529,-41885
chr14:70276197-70276440	chr14	+	70276305	70276434	True	NM_003049,NM_006925	chr14,chr14	-,+	SLC10A1,SRSF5	-12299,-42531
chr7:131372706-131373129	chr7	+	131372933	131373127	True	NM_005397,NM_013255	chr7,chr7	-,+	PODXL,MKLN1	-131557,-360389
chr17:49345680-49346454	chr17	+	49345683	49346360	True	NM_017643,NM_016001	chr17,chr17	-,+	MBTD1,UTP18	-8256,-7837
chr4:70518092-70519693	chr4	+	70518454	70519727	True	NM_006798,NM_001025104	chr4,chr4	-,+	UGT2A1,CSN1S1	-5037,277071
chr6:122791326-122792760	chr6	+	122791524	122792670	True	NM_020755,NM_181794	chr6,chr6	-,+	SERINC1,PKIB	332,391
chr12:102213039-102214249	chr12	+	102213156	102214078	True	NM_018370,NM_024312	chr12,chr12	+,-	DRAM1,GNPTAB	57026,10624
chr1:53698384-53699216	chr1	+	53698446	53699226	True	NM_000098,NM_002370	chr1,chr1	+,-	CPT2,MAGOH	-36404,5106
chr10:99398009-99399195	chr10	+	99398126	99398943	True	NM_018425,NM_178832,NM_001098831	chr10,chr10,chr10	+,-,-	PI4K2A,MORN4,MORN4	1499,-4782,-4213
chr7:89875037-89875418	chr7	+	89875131	89875447	True	NM_001039706,NM_001160138,NM_152706	chr7,chr7,chr7	+,+,-	C7orf63,C7orf63,C7orf62	-694,-694,-1450100
chr2:39102364-39102675	chr2	+	39102379	39102633	True	NM_001145450,NM_198963	chr2,chr2	+,-	MORN2,DHX57	469,438
chr8:12670512-12671445	chr8	+	12670624	12671425	True	NR_015383,NR_037495	chr8,chr8	-,+	LOC340357,MIR3926-2	-1714,-85929
chr3:113257331-113258705	chr3	+	113257603	113258560	True	NM_144718,NM_017699	chr3,chr3	-,+	SPICE1,SIDT1	-23569,-6441
chr18:11849355-11850115	chr18	+	11849536	11850083	True	NM_023075,NM_020412	chr18,chr18	-,+	MPPE1,CHMP1B	58608,1305
chr19:55286698-55288359	chr19	+	55286745	55287763	True	NM_014218,NM_001127255	chr19,chr19	+,-	KIR2DL1,NLRP7	-5531,171160
chr8:39175856-39177428	chr8	+	39175898	39177174	True	NR_001448,NR_001569	chr8,chr8	+,-	ADAM5P,ADAM3A	-3775,203359
chrX:78622187-78622473	chrX	+	78622284	78622484	True	NM_001171581,NM_004867,NM_032553	chrX,chrX,chrX	-,-,+	ITM2A,ITM2A,GPR174	615,615,-195866
chr1:91183789-91184078	chr1	+	91183989	91184113	True	NM_020063,NM_182976	chr1,chr1	-,+	BARHL2,ZNF326	-1195,-723362
chr6:33716766-33717434	chr6	+	33716829	33717301	True	NM_001142883,NM_054111,NM_002224	chr6,chr6,chr6	-,-,+	IP6K3,IP6K3,ITPR3	-2067,-2067,-127724
chr1:36413639-36414082	chr1	+	36413748	36413816	True	NM_005202,NM_177422	chr1,chr1	-,+	COL8A2,EIF2C3	152092,-17124
chr1:90049858-90051290	chr1	+	90049971	90051203	True	NM_015350,NR_033981	chr1,chr1	+,-	LRRC8B,FLJ27354	-25750,47309
chr1:161059242-161059704	chr1	+	161059311	161059744	True	NR_033386,NR_033385,NM_030916,NM_001007255,NM_152366	chr1,chr1,chr1,chr1,chr1	+,+,-,+,+	KLHDC9,KLHDC9,PVRL4,KLHDC9,KLHDC9	8406,8406,42,8436,8436
chr16:2265425-2265721	chr16	+	2265468	2265613	True	NM_004424,NM_182563,NM_001199174,NM_001042371	chr16,chr16,chr16,chr16	+,-,+,-	E4F1,C16orf79,MLST8,PGP	7953,-4399,-9787,-646
chr11:8678463-8679227	chr11	+	8678569	8679106	True	NM_000990,NM_014818	chr11,chr11	+,-	RPL27A,TRIM66	24888,1328
chr12:56135873-56136782	chr12	+	56135905	56136810	True	NM_001780,NM_005811	chr12,chr12	-,+	CD63,GDF11	-12995,253
chr1:18088980-18089281	chr1	+	18088994	18089248	True	NM_018715,NM_030812	chr1,chr1	-,+	RCC2,ACTL8	-322774,-7237
chr19:46002111-46002329	chr19	+	46002114	46002322	True	NM_003370,NM_005619,NM_206900,NM_001080401,NM_206901	chr19,chr19,chr19,chr19,chr19	+,-,-,+,-	VASP,RTN2,RTN2,PPM1N,RTN2	8365,-1803,-1801,-434,-5640
chr6:165553368-165553653	chr6	+	165553459	165553550	True	NM_144980,NR_027284	chr6,chr6	-,+	C6orf118,LOC441177	169612,847488
chr1:22470387-22470798	chr1	+	22470478	22470806	True	NM_030761,NM_001791	chr1,chr1	-,+	WNT4,CDC42	-959,-91411
chr1:173839284-173839533	chr1	+	173839367	173839579	True	NR_002746,NM_032522,NR_003944,NR_037605,NR_003942,NR_003943,NR_003940,NR_003941,NR_002750,NM_001122770,NR_002578,NR_002579,NR_003939,NR_003938	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,+,-,+,-,-,-,-,-,+,-,-,-,-	SNORD47,ZBTB37,SNORD78,LOC100506046,SNORD76,SNORD77,SNORD80,SNORD75,SNORD44,ZBTB37,GAS5,SNORD74,SNORD79,SNORD81	-5784,-1925,-4543,-7032,-3514,-3858,-5326,-3291,-4201,-1925,-2242,-2484,-4799,-6012
chr11:61560121-61560444	chr11	+	61560123	61560415	True	NR_030342,NM_014206,NM_004111	chr11,chr11,chr11	-,-,+	MIR611,C11orf10,FEN1	-90,-38,-24
chr15:55790659-55790957	chr15	+	55790667	55790795	True	NM_130810,NM_001033559,NR_037923,NM_001198784,NM_001033560	chr15,chr15,chr15,chr15,chr15	-,-,-,+,-	DYX1C1,DYX1C1,DYX1C1-CCPG1,FLJ27352,DYX1C1	9695,9695,45,-89995,9695
chrY:179790-180055	chrY	+	179839	180089	True	NM_018390,NM_012227	chrY,chrY	+,-	PLCXD1,GTPBP6	-31829,848
chrY:179790-180055	chrX	+	229839	230089	False	NM_018390,NM_012227	chrX,chrX	+,-	PLCXD1,GTPBP6	-31829,848
chr21:46292670-46292896	chr21	+	46292733	46292899	True	NM_058190,NM_004339	chr21,chr21	+,-	C21orf70,PTTG1IP	67055,969
chr18:24764767-24765017	chr18	+	24764778	24765052	True	NR_026908,NM_031422	chr18,chr18	+,-	C18orf16,CHST9	-319557,287
chr12:860713-861026	chr12	+	860721	861056	True	NM_001184985,NM_016533,NM_018979,NM_213655,NM_014823	chr12,chr12,chr12,chr12,chr12	+,-,+,+,+	WNK1,NINJ2,WNK1,WNK1,WNK1	1032,-87966,1032,1032,1032
chr10:51978370-51980233	chr10	+	51978369	51979962	True	NM_018232,NM_001143974	chr10,chr10	+,-	FAM21B,ASAH2	-140535,28468
chr10:51978370-51980233	chr10	+	48033344	48034677	False	NM_002900,NR_033407	chr10,chr10	-,+	RBP3,CTSL1P2	356374,121265
chr5:140715888-140717475	chr5	+	140715969	140717472	True	NM_031993,NM_005642,NM_032009,NM_032011,NM_018915,NM_018916,NM_018912	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,-,+,+,+,+,+	PCDHGA1,TAF7,PCDHGA2,PCDHGA3,PCDHGA2,PCDHGA3,PCDHGA1	-5778,-15618,881,6128,881,6128,-5778
chr22:24345193-24345853	chr22	+	24345510	24345848	True	NR_003081,NM_000854	chr22,chr22	-,+	GSTTP1,GSTT2	1460,-23247
chr22:24345193-24345853	chr22	+	24400063	24400140	False	NR_003082,NM_012295,NM_001201429,NM_001199281	chr22,chr22,chr22,chr22	-,+,+,+	GSTTP2,CABIN1,CABIN1,CABIN1	1818,7624,7624,7679
chr12:111288467-111290358	chr12	+	111288614	111289951	True	NM_152591,NM_000432	chr12,chr12	+,-	CCDC63,MYL2	-3856,68504
chr12:107168096-107168307	chr12	+	107168098	107168286	True	NM_001033050,NM_018157	chr12,chr12	-,+	MTERFD3,RIC8B	212693,112
chr16:70379450-70380238	chr16	+	70379465	70380219	True	NM_018332,NM_001605	chr16,chr16	+,-	DDX19A,AARS	604,-56053
chr5:96043131-96043564	chr5	+	96043322	96043501	True	NM_173060,NM_016442	chr5,chr5	+,-	CAST,ERAP1	-4882,100448
chr2:198245164-198245901	chr2	+	198245593	198245780	True	NM_025147,NM_012433	chr2,chr2	+,-	COQ10B,SF3B1	72450,54042
chr1:89853464-89854911	chr1	+	89853544	89854065	True	NM_052942,NR_003133	chr1,chr1	-,+	GBP5,GBP1P1	-115000,19172
chr21:11176866-11177179	chr21	+	11176986	11177094	True	NM_001187,NR_037458	chr21,chr21	-,+	BAGE,MIR3687	-78049,-1350847
chr11:60928285-60928629	chr11	+	60928290	60928574	True	NM_001079807,NM_017966	chr11,chr11	+,-	PGA3,VPS37C	42409,392
chr11:6976079-6977623	chr11	+	6976295	6977659	True	NM_003700,NM_013250	chr11,chr11	-,+	OR2D2,ZNF215	-62564,-28698
chr1:71511460-71511692	chr1	+	71511462	71511606	True	NR_028294,NR_028293,NR_028292,NM_001126044,NM_153742,NM_198719,NM_198718,NM_198715,NM_198714,NM_198717,NM_198716	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,+,-,-,-,-,-,-	PTGER3,PTGER3,PTGER3,PTGER3,CTH,PTGER3,PTGER3,PTGER3,PTGER3,PTGER3,PTGER3	1935,1935,1935,1935,-634612,1935,1935,1935,1935,1935,1935
chr14:23477217-23479085	chr14	+	23477780	23479121	True	NM_001130706,NM_021944,NM_001130708,NM_001099780	chr14,chr14,chr14,chr14	-,-,-,+	C14orf93,C14orf93,C14orf93,PSMB11	289,289,289,32254
chr9:131216280-131216771	chr9	+	131216482	131216734	True	NR_029837,NM_153439,NM_153435,NM_153437,NM_153436,NM_153433,NM_153432,NM_153440,NR_036757,NR_036756,NR_036755,NR_036754	chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,+,+,+,+,+,+,+,+,+,+,+	MIR219-2,ODF2,ODF2,ODF2,ODF2,ODF2,ODF2,ODF2,ODF2,ODF2,ODF2,ODF2	-61489,1550,1550,2451,699,1944,1550,1944,1550,1550,1550,1550
chr17:79304831-79305230	chr17	+	79304917	79305235	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	68304,-443
chr6:105308238-105309131	chr6	+	105308269	105308945	True	NM_001004317,NM_020771	chr6,chr6	+,-	LIN28B,HACE1	95977,-475
chr14:95236461-95236807	chr14	+	95236529	95236811	True	NR_015340,NM_173849	chr14,chr14	+,-	SERPINA13,GSC	-129518,-30
chr9:140442255-140442788	chr9	+	140442355	140442739	True	NM_032477,NM_152286,NM_001098537	chr9,chr9,chr9	+,-,-	MRPL41,PNPLA7,PNPLA7	3569,2297,2297
chr12:6451052-6452516	chr12	+	6451099	6452087	True	NM_001144857,NM_001065	chr12,chr12	+,-	PLEKHG6,TNFRSF1A	-29333,-30
chr9:140125095-140125865	chr9	+	140125269	140125773	True	NM_001190228,NM_080877,NM_006088,NM_001177316,NM_001177317,NM_031297,NM_199001	chr9,chr9,chr9,chr9,chr9,chr9,chr9	+,+,+,+,+,-,+	LOC643596,SLC34A3,TUBB2C,SLC34A3,SLC34A3,RNF208,C9orf169	-3302,65,9937,-111,-111,-9494,-5676
chr9:80792602-80793147	chr9	+	80792770	80793194	True	NM_001098802,NM_002072	chr9,chr9	+,-	CEP78,GNAQ	57796,-146551
chr12:31227781-31228893	chr12	+	31227978	31228678	True	NM_004399,NM_001135811,NM_030653,NM_152438	chr12,chr12,chr12,chr12	+,-,+,+	DDX11,FAM60A,DDX11,DDX11	-1250,250496,-1250,-1250
chr12:31227781-31228893	chr12	+	9437446	9437496	False	NR_036263,NR_024374	chr12,chr12	-,+	MIR1244-3,LOC642846	-45299,-1244
chr15:55568740-55570076	chr15	+	55569418	55570100	True	NM_004855,NM_004580,NM_183236,NM_183234	chr15,chr15,chr15,chr15	+,-,-,-	PIGB,RAB27A,RAB27A,RAB27A	41032,-6833,-6311,-6934
chr5:1549807-1550098	chr5	+	1549811	1549997	True	NM_024830,NM_004553	chr5,chr5	-,+	LPCAT1,NDUFS6	-25735,251498
chr3:33318227-33318817	chr3	+	33318517	33318795	True	NM_012157,NM_015551,NM_001171713	chr3,chr3,chr3	+,-,+	FBXL2,SUSD5,FBXL2	138,-57810,141
chr3:148705045-148705324	chr3	+	148705205	148705373	True	NM_001184721,NM_001184720,NM_004130,NM_003071	chr3,chr3,chr3,chr3	+,+,+,-	GYG1,GYG1,GYG1,HLTF	3821,3821,3821,99018
chr3:148705045-148705324	chr1	+	156021508	156023408	False	NM_020131,NM_014017,NM_001145264,NM_020387	chr1,chr1,chr1,chr1	-,+,+,+	UBQLN4,LAMTOR2,LAMTOR2,RAB25	1894,1108,1108,7557
chr19:51738928-51739133	chr19	+	51739004	51739140	True	NM_001772,NM_001163922	chr19,chr19	+,-	CD33,VSIG10L	-10728,106288
chr3:128903407-128903758	chr3	+	128903411	128903670	True	NM_001127195,NM_001127194,NM_001127196,NM_001127193,NM_001127192,NM_016128,NM_003418	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,-,+,-	CNBP,CNBP,CNBP,CNBP,CNBP,COPG,CNBP	-601,-601,-601,-601,-601,64782,-601
chr11:43717845-43718824	chr11	+	43718755	43718835	True	NR_033868,NM_016142	chr11,chr11	-,+	LOC399881,HSD17B12	-427836,-16670
chr12:104358189-104359761	chr12	+	104358467	104359602	True	NM_003211,NM_001135570	chr12,chr12	+,-	TDG,C12orf73	-10,-7474
chr17:79374739-79375103	chr17	+	79374741	79375060	True	NM_001080519,NR_036152	chr17,chr17	+,-	BAHCC1,MIR3186	-1252,43204
chr9:114936433-114936941	chr9	+	114936528	114936956	True	NM_022486,NM_001195822	chr9,chr9	-,+	SUSD1,HSDL2	650,205232
chr2:74275217-74276245	chr2	+	74275435	74276221	True	NM_144993,NM_001035505	chr2,chr2	+,-	TET3,BOLA3	-2036,98868
chr11:309043-309598	chr11	+	309127	309647	True	NM_006435,NM_003641,NM_001025295	chr11,chr11,chr11	+,+,-	IFITM2,IFITM1,IFITM5	-1071,4343,-9601
chr2:225865421-225866097	chr2	+	225865755	225865979	True	NM_014689,NM_020864	chr2,chr2	-,+	DOCK10,KIAA1486	41401,399622
chr22:26985369-26985660	chr22	+	26985374	26985608	True	NM_003595,NM_001886	chr22,chr22	-,+	TPST2,CRYBA4	531,32319
chr7:30325613-30327366	chr7	+	30325736	30326845	True	NR_030319,NR_037513,NM_147128	chr7,chr7,chr7	+,-,+	MIR550A1,MIR550B1,ZNRF2	2564,2717,-1865
chr5:94620927-94621237	chr5	+	94621047	94621283	True	NM_152548,NM_024717	chr5,chr5	+,-	FAM81B,MCTP1	105764,-768
chr22:35852566-35854406	chr22	+	35853088	35853945	True	NM_005368,NM_006739	chr22,chr22	-,+	MB,MCM5	159490,-57023
chr1:170967325-170968250	chr1	+	170967329	170968294	True	NM_025063,NR_031627	chr1,chr1	+,-	C1orf129,MIR1295	-62744,102710
chr6:66803427-66804539	chr6	+	66803427	66804423	True	NR_026540,NM_001142801	chr6,chr6	+,-	MCART3P,EYS	-305706,-386309
chr19:47839640-47840364	chr19	+	47840077	47840401	True	NM_001009813,NM_018485	chr19,chr19	-,+	MEIS3,GPR77	82434,-31
chr18:8618598-8618857	chr18	+	8618796	8618906	True	NM_001025300,NR_024419	chr18,chr18	+,-	RAB12,LOC100192426	-9408,-251764
chr18:71958528-71958895	chr18	+	71958613	71958925	True	NM_001914,NM_148923,NM_001190807,NM_001174123	chr18,chr18,chr18,chr18	-,-,-,+	CYB5A,CYB5A,CYB5A,DKFZP781G0119	376,376,376,24184
chr7:75543103-75543652	chr7	+	75543340	75543696	True	NM_031925,NM_000941	chr7,chr7	-,+	TMEM120A,POR	80346,723
chr1:78241010-78242020	chr1	+	78241096	78242035	True	NM_201626,NM_198549	chr1,chr1	-,+	USP33,FAM73A	-15559,3273
chr19:36537563-36538444	chr19	+	36537672	36538318	True	NM_001083961,NM_152658,NM_173636	chr19,chr19,chr19	+,-,+	WDR62,THAP8,WDR62	7464,7398,7464
chr1:51577350-51578784	chr1	+	51577842	51578833	True	NM_001136508,NM_007051	chr1,chr1	+,-	C1orf185,FAF1	-9993,-151906
chr6:10558970-10560412	chr6	+	10559021	10560250	True	NR_027793,NM_001491	chr6,chr6	-,+	C6orf218,GCNT2	-123966,-3123
chr4:2852897-2853552	chr4	+	2852951	2853529	True	NM_014190,NM_176801,NM_001120,NM_014189,NM_001119	chr4,chr4,chr4,chr4,chr4	+,+,-,+,+	ADD1,ADD1,MFSD10,ADD1,ADD1	-7418,-7418,82485,-7418,-7418
chr19:16143543-16145144	chr19	+	16143921	16145009	True	NR_024336,NR_024335,NM_021187	chr19,chr19,chr19	+,+,-	FLJ25328,FLJ25328,CYP4F11	279,-45,-98245
chr1:161577604-161577978	chr1	+	161577694	161577816	True	NM_000570,NR_024151	chr1,chr1	-,+	FCGR3B,HSPA7	23392,-1896
chr1:161577604-161577978	chr1	+	161496067	161496151	False	NM_000569,NM_002155	chr1,chr1	-,+	FCGR3A,HSPA6	23717,-2082
chr3:11684048-11684327	chr3	+	11684077	11684245	True	NM_001128219,NM_003178	chr3,chr3	-,+	VGLL4,SYN2	1203,361616
chr15:35373348-35373727	chr15	+	35373358	35373696	True	NM_014106,NR_003144	chr15,chr15	-,+	ZNF770,LOC723972	-92861,155830
chr2:68972318-68973858	chr2	+	68972374	68973660	True	NM_001166277,NM_014482	chr2,chr2	+,-	ARHGAP25,BMP10	-10521,125039
chr12:106639777-106640240	chr12	+	106639809	106640222	True	NM_006825,NM_152772	chr12,chr12	-,+	CKAP4,TCP11L2	1548,56358
chr20:20346164-20346408	chr20	+	20346163	20346381	True	NM_002196,NM_016652	chr20,chr20	+,-	INSM1,CRNKL1	2383,-309473
chr11:109290960-109292488	chr11	+	109291327	109292537	True	NM_015065,NM_207645	chr11,chr11	-,+	EXPH5,C11orf87	-826953,308
chr19:17828532-17828776	chr19	+	17828558	17828634	True	NM_001080421,NM_018174	chr19,chr19	-,+	UNC13A,MAP1S	-29550,1668
chr2:110968244-110969171	chr2	+	110968496	110969207	True	NM_207181,NM_001128178,NM_001128179,NR_037626,NM_000272	chr2,chr2,chr2,chr2,chr2	-,-,-,+,-	NPHP1,NPHP1,NPHP1,LOC100507334,NPHP1	-5857,-5857,-5857,34007,-5857
chr10:115418359-115420117	chr10	+	115418777	115419771	True	NM_006175,NM_033340,NM_198060	chr10,chr10,chr10	-,+,-	NRAP,CASP7,NRAP	4084,19163,4084
chr19:2051489-2052097	chr19	+	2051629	2052007	True	NM_001031735,NM_017572,NM_199054	chr19,chr19,chr19	+,-,-	IZUMO4,MKNK2,MKNK2	44860,-386,-386
chr19:18392995-18393257	chr19	+	18393092	18393188	True	NM_001145304,NM_005354,NR_036155,NM_001145305,NM_025249	chr19,chr19,chr19,chr19,chr19	-,-,+,-,-	KIAA1683,JUND,MIR3188,KIAA1683,KIAA1683	-7773,-660,-256,-7773,-7773
chr5:149339225-149339828	chr5	+	149339281	149339670	True	NM_000112,NM_000440	chr5,chr5	+,-	SLC26A2,PDE6A	629,-14925
chr17:79343560-79343942	chr17	+	79343694	79343806	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	29733,-39220
chr19:49373685-49373964	chr19	+	49373811	49373877	True	NM_020904,NM_014330,NM_001161354	chr19,chr19,chr19	-,+,-	PLEKHA4,PPP1R15A,PLEKHA4	-1927,1771,-1927
chr5:38542608-38544477	chr5	+	38542688	38544286	True	NM_001127671,NM_182801	chr5,chr5	-,+	LIFR,EGFLAM	12512,-97103
chr7:151328091-151328722	chr7	+	151328094	151328755	True	NR_034013,NM_024429	chr7,chr7	+,-	LOC100131176,PRKAG2	-221830,639
chr3:139656508-139657256	chr3	+	139656631	139657273	True	NM_022131,NM_178177	chr3,chr3	+,-	CLSTN2,NMNAT3	-2656,-259746
chr10:76819947-76821260	chr10	+	76820243	76821097	True	NM_001003892,NM_001174156	chr10,chr10	-,+	DUPD1,SAMD8	-1971,50295
chr15:42566891-42567296	chr15	+	42567118	42567311	True	NM_198141,NM_015497,NM_001110503	chr15,chr15,chr15	+,-,-	GANC,TMEM87A,TMEM87A	-813,-1363,-1363
chr5:96478216-96479837	chr5	+	96478355	96479774	True	NM_153234,NM_175920	chr5,chr5	-,+	LIX1,LNPEP	57,-184250
chr2:198563907-198565202	chr2	+	198564342	198565042	True	NM_144629,NM_138395	chr2,chr2	-,+	RFTN2,MARS2	-23758,4985
chr15:49767337-49768009	chr15	+	49767369	49767621	True	NM_152647,NM_002009	chr15,chr15	-,+	C15orf33,FGF7	145549,-52055
chr1:23889999-23891202	chr1	+	23890058	23891040	True	NM_002167,NR_027042	chr1,chr1	-,+	ID3,MDS2	-3736,62783
chr17:62504230-62505724	chr17	+	62504274	62505523	True	NM_138363,NM_004396	chr17,chr17	+,-	CCDC45,DDX5	-1169,-1790
chr6:24647485-24648729	chr6	+	24647740	24648638	True	NM_001160094,NM_001168374,NM_001168375,NM_001168376,NM_014809,NM_001168377	chr6,chr6,chr6,chr6,chr6,chr6	+,-,-,-,-,-	ACOT13,KIAA0319,KIAA0319,KIAA0319,KIAA0319,KIAA0319	18624,-1357,-1491,-1491,-1357,-1357
chr9:36138670-36139401	chr9	+	36138722	36139390	True	NM_001190383,NM_022343	chr9,chr9	-,+	GNE,GLIPR2	119156,-2031
chr15:75284238-75284845	chr15	+	75284252	75284649	True	NM_001178111,NM_017793,NM_001178112,NR_033660,NM_138967	chr15,chr15,chr15,chr15,chr15	+,-,+,+,+	SCAMP5,RPP25,SCAMP5,SCAMP5,SCAMP5	3226,-34477,3226,3226,3226
chr6:44281220-44282451	chr6	+	44281321	44282299	True	NM_145026,NM_020745	chr6,chr6	+,-	SPATS1,AARS2	28097,-258
chr1:173167367-173168778	chr1	+	173167614	173168680	True	NM_004905,NM_003326	chr1,chr1	+,-	PRDX6,TNFSF4	277805,7841
chr1:107598111-107598674	chr1	+	107598209	107598675	True	NM_018137,NM_001079874	chr1,chr1	+,-	PRMT6,VAV3	591,632501
chr10:8096595-8096983	chr10	+	8096598	8096826	True	NR_024255,NM_002051,NR_024256,NM_001002295	chr10,chr10,chr10,chr10	-,+,-,+	FLJ45983,GATA3,FLJ45983,GATA3	-1151,4,-1151,4
chr6:105844914-105846837	chr6	+	105845139	105846602	True	NR_037157,NM_002726	chr6,chr6	+,-	C6orf112,PREP	-259628,4447
chr19:12725348-12725700	chr19	+	12725350	12725413	True	NM_153358,NM_020714	chr19,chr19	+,-	ZNF791,ZNF490	-3669,-3727
chr12:50357244-50358506	chr12	+	50357512	50358548	True	NR_026948,NM_001651,NM_001652	chr12,chr12,chr12	-,+,+	LOC283332,AQP5,AQP6	-51866,-2284,8071
chr6:109416413-109416660	chr6	+	109416447	109416693	True	NM_014454,NM_001083535	chr6,chr6	-,+	SESN1,CEP57L1	-739,-149
chr1:98386695-98387047	chr1	+	98386772	98387068	True	NM_000110,NM_001160301,NM_015976	chr1,chr1,chr1	-,-,+	DPYD,DPYD,SNX7	-157,-157,740167
chr12:120315591-120316293	chr12	+	120315602	120316336	True	NM_207311,NM_007174	chr12,chr12	+,-	CCDC64,CIT	111311,-510
chr7:141400581-141400938	chr7	+	141400664	141400987	True	NM_001080392,NM_001105558	chr7,chr7	-,+	KIAA1147,WEE2	1017,7165
chr6:99796230-99796782	chr6	+	99796272	99796753	True	NM_032511,NM_001195131	chr6,chr6	-,+	C6orf168,LOC100130890	835,172116
chr1:78226771-78228426	chr1	+	78227303	78228370	True	NM_015017,NM_201626,NM_198549,NM_201624	chr1,chr1,chr1,chr1	-,-,+,-	USP33,USP33,FAM73A,USP33	-1766,-1766,16938,-1766
chr19:58342193-58343163	chr19	+	58342676	58342760	True	NR_024162,NM_001204818	chr19,chr19	-,+	FKBP1AP1,LOC100293516	-3846,-1065
chr20:37073257-37073504	chr20	+	37073334	37073508	True	NR_003239,NR_002972,NR_002986,NR_027241,NR_015366	chr20,chr20,chr20,chr20,chr20	+,+,+,-,-	SNHG11,SNORA39,SNORA60,LOC388796,LOC388796	1788,3217,4503,-9316,-9372
chr11:133735572-133736042	chr11	+	133735603	133735946	True	NM_174927,NR_027276	chr11,chr11	-,+	SPATA19,LOC100128239	-20211,166220
chr11:36398288-36398516	chr11	+	36398295	36398563	True	NM_024841,NM_001160168,NM_014186	chr11,chr11,chr11	+,+,-	PRR5L,PRR5L,COMMD9	-811,-811,-87296
chr19:2946881-2947566	chr19	+	2947093	2947549	True	NM_021217,NM_001143986	chr19,chr19	-,+	ZNF77,TLE6	-2124,29986
chr4:108748996-108749479	chr4	+	108749176	108749522	True	NM_001136258,NM_005443	chr4,chr4	+,-	SGMS2,PAPSS1	-3516,-107757
chr9:98635515-98636083	chr9	+	98635612	98636049	True	NM_001010895,NR_023390,NR_023389	chr9,chr9,chr9	+,-,-	C9orf102,C9orf130,C9orf130	1850,2260,2260
chr3:111999803-112000207	chr3	+	111999803	112000221	True	NM_183061,NM_001004196	chr3,chr3	-,+	SLC9A10,CD200	12903,51694
chr19:14939494-14940056	chr19	+	14939640	14940022	True	NM_017506,NM_012377	chr19,chr19	-,+	OR7A5,OR7C2	-364,112278
chr2:217277080-217277289	chr2	+	217277141	217277289	True	NM_014140,NM_020814,NM_001127207	chr2,chr2,chr2	+,-,+	SMARCAL1,MARCH4,SMARCAL1	-55,-40391,183
chrX:55513359-55514907	chrX	+	55513539	55514676	True	NM_014061,NM_201286	chrX,chrX	+,-	MAGEH1,USP51	-35052,1006
chr11:82610430-82611209	chr11	+	82610434	82611180	True	NM_199418,NM_145018,NM_005040	chr11,chr11,chr11	-,+,-	PRCP,C11orf82,PRCP	427,1556,427
chr10:96986834-96987544	chr10	+	96987187	96987530	True	NM_207321,NM_020992	chr10,chr10	+,-	C10orf129,PDLIM1	-33285,63301
chr5:177021581-177022284	chr5	+	177021595	177022129	True	NR_024019,NM_017510,NM_007255	chr5,chr5,chr5	-,+,+	FAM193B,TMED9,B4GALT7	-40047,-2433,4989
chr2:17722515-17722914	chr2	+	17722526	17722926	True	NM_003385,NM_001099218	chr2,chr2	+,-	VSNL1,RAD51AP2	-770,-22820
chr17:75082925-75084393	chr17	+	75082960	75084380	True	NM_001204408,NR_036200,NM_001204410,NR_027058,NR_003013	chr17,chr17,chr17,chr17,chr17	+,-,+,+,+	SEC14L1,MIR4316,SEC14L1,C17orf86,SCARNA16	344,308806,854,344,1008
chr19:44507103-44507335	chr19	+	44507102	44507188	True	NM_006300,NM_003425	chr19,chr19	+,-	ZNF230,ZNF45	-76,-67691
chr18:5293969-5294770	chr18	+	5294048	5294637	True	NM_001143823,NM_003409,NR_026569,NR_015389	chr18,chr18,chr18,chr18	-,-,-,+	ZFP161,ZFP161,ZFP161,LOC339290	1453,1453,1114,-56000
chr4:155526513-155526796	chr4	+	155526555	155526846	True	NM_021870,NM_005141,NM_000509	chr4,chr4,chr4	-,+,-	FGG,FGB,FGG	7107,-42477,7107
chr3:40520786-40521787	chr3	+	40520970	40521810	True	NM_001145083,NM_001145082,NR_033965,NM_001145093,NR_026746	chr3,chr3,chr3,chr3,chr3	+,+,-,+,+	ZNF619,ZNF619,FLJ33065,ZNF619,ZNF619	-2399,-2428,-169781,-2428,-2428
chr16:22387380-22388650	chr16	+	22387729	22388145	True	NM_001802,NR_027154	chr16,chr16	-,+	CDR2,LOC641298	-1791,60183
chr12:101798942-101799265	chr12	+	101798942	101799301	True	NM_152323,NM_001177	chr12,chr12	+,-	SPIC,ARL1	72033,2321
chr6:110670695-110672233	chr6	+	110670845	110671814	True	NM_001123364,NM_015891	chr6,chr6	-,+	C6orf186,CDC40	7718,-169273
chr18:35146303-35146555	chr18	+	35146411	35146579	True	NM_020180,NM_001025088,NM_001025089,NM_001025087,NR_036202	chr18,chr18,chr18,chr18,chr18	-,-,-,-,+	CELF4,CELF4,CELF4,CELF4,MIR4318	-411,-411,-411,-411,90518
chrX:21854183-21855768	chrX	+	21854516	21855723	True	NM_015884,NM_014332	chrX,chrX	+,-	MBTPS2,SMPX	1932,-78286
chr9:127537468-127538004	chr9	+	127537522	127537614	True	NM_001489,NM_033334,NM_182487	chr9,chr9,chr9	-,-,+	NR6A1,NR6A1,OLFML2A	-3946,-3946,1822
chr4:9443848-9445355	chr11	+	71587499	71587550	True	NR_029192,NM_001002035	chr11,chr11	-,+	LOC100133315,DEFB108B	51994,-43305
chr3:19986065-19987356	chr3	+	19986174	19987355	True	NM_144715,NM_004162	chr3,chr3	-,+	EFHB,RAB5A	-10468,1216
chr5:178770544-178770813	chr5	+	178770573	178770843	True	NM_021599,NM_014244,NM_025158	chr5,chr5,chr5	-,-,+	ADAMTS2,ADAMTS2,RUFY1	1638,1638,206727
chr13:113047112-113047714	chr13	+	113047122	113047645	True	NM_006322,NM_145248	chr13,chr13	-,+	TUBGCP3,SPACA7	194889,-16522
chr13:113047112-113047714	chr13	-	111609272	111609405	False	NM_017664,NM_001113511	chr13,chr13	-,+	ANKRD10,ARHGEF7	-41856,158218
chr9:140770913-140771387	chr9	+	140770991	140771367	True	NM_032937,NM_000718	chr9,chr9	-,+	C9orf37,CACNA1B	-257683,873
chr11:88049611-88050225	chr11	+	88049672	88050035	True	NM_000372,NM_001814	chr11,chr11	+,-	TYR,CTSC	861004,20963
chr20:3064517-3064927	chr20	+	3064516	3064704	True	NM_000490,NM_000915	chr20,chr20	-,+	AVP,OXT	716,-12301
chr2:55231127-55232085	chr2	+	55231153	55232112	True	NM_007008,NM_001135592	chr2,chr2	-,+	RTN4,RPS27A	5408,226926
chr19:51538313-51539065	chr19	+	51538353	51538741	True	NM_145894,NM_145895,NM_001136032,NM_019598,NM_001167605,NM_006853,NM_144947,NM_014441	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,+	KLK12,KLK12,KLK11,KLK12,KLK11,KLK11,KLK11,SIGLEC9	-205,-205,-8481,-205,-7063,-7063,-7468,89395
chr16:23563785-23565489	chr16	+	23564509	23565296	True	NM_019116,NR_003501,NM_001083614	chr16,chr16,chr16	+,-,-	UBFD1,EARS2,EARS2	3565,3463,3463
chr4:166796127-166796730	chr4	+	166796172	166796642	True	NM_001204760,NR_026575,NM_012464	chr4,chr4,chr4	+,-,+	TLL1,GK3P,TLL1	-1813,-594997,-1813
chr6:28456127-28457601	chr6	+	28456509	28457585	True	NM_182701,NM_001509	chr6,chr6	-,+	GPX6,GPX5	26035,36203
chr10:30976842-30978109	chr10	+	30976866	30977964	True	NM_183058,NM_005204	chr10,chr10	-,+	LYZL2,MAP3K8	-58219,-254051
chr6:150246303-150246771	chr6	+	150246338	150246740	True	NM_025217,NM_001001788	chr6,chr6	+,-	ULBP2,RAET1G	16395,-2124
chr6:35437312-35438255	chr6	+	35437401	35438236	True	NM_003214,NM_007104	chr6,chr6	-,+	TEAD3,RPL10A	26682,-1274
chrX:153657329-153657546	chrX	+	153657397	153657481	True	NM_001009934,NM_001493,NM_001183	chrX,chrX,chrX	-,+,+	DNASE1L1,GDI1,ATP6AP1	-16970,7777,-470
chrX:301031-301753	chrY	+	251079	251698	False	NR_027232,NM_013239	chrY,chrY	+,-	NCRNA00107,PPP2R3B	-19745,46042
chrX:301031-301753	chrX	+	301079	301698	True	NR_027232,NM_013239	chrX,chrX	+,-	NCRNA00107,PPP2R3B	-19745,46042
chr12:53900625-53900833	chr12	+	53900640	53900882	True	NM_003717,NM_004178,NM_134323,NM_001193511,NM_134324,NM_006301	chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,-,+,-	NPFF,TARBP2,TARBP2,MAP3K12,TARBP2,MAP3K12	590,-5987,-5987,-7196,-5315,-7196
chr22:35525527-35526192	chr22	+	35525815	35525904	True	NM_001008494,NM_005368	chr22,chr22	+,-	ISX,MB	-63737,487545
chr7:139475927-139476158	chr7	+	139475926	139476196	True	NM_001166254,NM_022740,NM_001130966,NM_001113239	chr7,chr7,chr7,chr7	+,-,+,-	TBXAS1,HIPK2,TBXAS1,HIPK2	1850,1551,1850,1551
chr8:82166330-82167109	chr8	+	82166339	82166969	True	NM_001444,NM_018440	chr8,chr8	+,-	FABP5,PAG1	25748,-142036
chr18:74519425-74519747	chr18	+	74519459	74519609	True	NM_007345,NM_001025081	chr18,chr18	+,-	ZNF236,MBP	16506,209496
chr16:87904255-87904467	chr16	+	87904273	87904515	True	NM_001173539,NM_003486	chr16,chr16	+,-	BANP,SLC7A5	80522,-1173
chr16:87904255-87904467	chr16	+	29626204	29626254	False	NR_002593,NM_001030288	chr16,chr16	-,+	SLC7A5P1,SPN	-1166,48045
chr16:87904255-87904467	chr16	+	21532936	21533065	False	NM_001077180,NR_002594	chr16,chr16	+,-	METTL9,SLC7A5P2	77790,-1171
chr17:19885015-19885475	chr17	+	19885015	19885519	True	NM_007202,NM_152904	chr17,chr17	-,+	AKAP10,SPECC1	-3886,104815
chr13:24882592-24882862	chr13	+	24882595	24882667	True	NM_178540,NM_006437	chr13,chr13	+,-	C1QTNF9,PARP4	1048,204331
chr11:113258511-113258837	chr11	+	113258648	113258878	True	NM_178510,NR_036183	chr11,chr11	+,-	ANKK1,MIR4301	-186,61982
chr4:108742288-108743529	chr4	+	108742288	108743392	True	NM_001136258,NM_005443	chr4,chr4	+,-	SGMS2,PAPSS1	2328,-100869
chr7:138145991-138147176	chr7	+	138146033	138147053	True	NM_174959,NM_015905,NM_003852	chr7,chr7,chr7	-,+,+	SVOPL,TRIM24,TRIM24	201966,-1013,-1013
chr15:92398704-92399025	chr15	+	92398713	92399072	True	NM_013272,NM_001145044,NR_021493	chr15,chr15,chr15	+,+,-	SLCO3A1,SLCO3A1,LOC100144604	-1827,-1827,716473
chr14:105044640-105044982	chr14	+	105044710	105044944	True	NM_207379,NM_001008404	chr14,chr14	-,+	TMEM179,C14orf180	26203,1111
chr1:115319708-115321569	chr1	+	115320124	115321174	True	NM_003176,NM_025073,NM_001102396	chr1,chr1,chr1	+,-,-	SYCP1,SIKE1,SIKE1	76280,2184,2184
chr6:167647387-167648194	chr6	+	167647673	167648110	True	NM_005299,NM_001143947	chr6,chr6	-,+	GPR31,UNC93A	-76354,56692
chr19:50832275-50832629	chr19	+	50832296	50832670	True	NM_004977,NM_007121	chr19,chr19	-,+	KCNC3,NR1H2	14,47014
chr2:120773381-120773726	chr2	+	120773518	120773744	True	NM_020909,NM_001184937,NM_001184938,NM_001184939,NR_000034	chr2,chr2,chr2,chr2,chr2	+,+,+,+,-	EPB41L5,EPB41L5,EPB41L5,EPB41L5,TMEM185B	-2978,-2978,-2797,-2978,207290
chr1:113467174-113468158	chr1	+	113467305	113468003	True	NR_002796,NM_001166496	chr1,chr1	+,-	AKR7A2P1,SLC16A1	-1387,30742
chr5:10440154-10440867	chr5	+	10440280	10440698	True	NM_031916,NM_138809,NM_001201466	chr5,chr5,chr5	+,-,+	ROPN1L,CMBL,ROPN1L	1275,-132112,1275
chr2:54784759-54785025	chr2	+	54784767	54784971	True	NM_178313,NM_001003937	chr2,chr2	+,-	SPTBN1,TSPYL6	559,-301358
chr4:89949279-89949635	chr4	+	89949410	89949572	True	NM_014883,NM_145715	chr4,chr4	-,+	FAM13A,TIGD2	28809,84395
chr5:56778183-56778447	chr5	+	56778234	56778438	True	NM_001127236,NM_001017992	chr5,chr5	+,-	GPBP1,ACTBL2	-268384,248
chr16:1728347-1728560	chr16	+	1728368	1728598	True	NM_144570,NM_014714	chr16,chr16	+,-	HN1L,IFT140	-141,-66259
chr12:45283305-45283753	chr12	+	45283309	45283801	True	NM_001025356,NM_001145107	chr12,chr12	+,-	ANO6,NELL2	325968,-12676
chr9:139643308-139643557	chr9	+	139643338	139643456	True	NM_178469,NR_033913,NM_198946,NM_001001712	chr9,chr9,chr9,chr9	-,+,-,-	LCN8,LOC100128593,LCN6,LCN10	9325,-2776,-358,-5927
chr11:125355697-125356633	chr11	+	125355853	125356652	True	NM_005103,NM_001007277,NM_022549	chr11,chr11,chr11	-,+,-	FEZ1,EI24,FEZ1	9609,82645,9609
chr8:119123177-119123705	chr8	+	119123180	119123682	True	NM_080651,NM_000127	chr8,chr8	+,-	MED30,EXT1	-590266,426
chr1:10273914-10274438	chr1	+	10274198	10274316	True	NM_015074,NM_004401,NM_183416	chr1,chr1,chr1	+,-,+	KIF1B,DFFA,KIF1B	-3485,258355,-3485
chr9:25678884-25679520	chr9	+	25678961	25679251	True	NM_001004125,NM_001099223	chr9,chr9	-,+	TUSC1,IFT74	-105,1267785
chr2:238874443-238874797	chr2	+	238874448	238874846	True	NM_080678,NR_037904,NM_030768	chr2,chr2,chr2	+,+,-	UBE2F,UBE2F-SCLY,ILKAP	740,740,237528
chr4:9784918-9786267	chr4	+	9784929	9786286	True	NR_031688,NM_000798	chr4,chr4	-,+	MIR548I2,DRD5	-226992,-1722
chr1:153233291-153233585	chr1	+	153233315	153233607	True	NM_052891,NM_000427	chr1,chr1	-,+	PGLYRP3,LOR	49637,-1187
chr19:1654374-1654589	chr19	+	1654422	1654622	True	NM_001136139,NM_003200,NM_001080488	chr19,chr19,chr19	-,-,+	TCF3,TCF3,ONECUT3	-4136,-2096,99039
chr12:28615933-28616789	chr12	+	28615984	28616818	True	NM_018318,NM_002820	chr12,chr12	+,-	CCDC91,PTHLH	-205912,-491068
chr7:25019809-25020014	chr7	+	25019893	25019955	True	NM_145321,NM_145322,NM_145320,NM_015550,NM_016447	chr7,chr7,chr7,chr7,chr7	-,-,-,-,+	OSBPL3,OSBPL3,OSBPL3,OSBPL3,MPP6	-133,-133,-133,-133,-406859
chr6:144009360-144010913	chr6	+	144009409	144010736	True	NM_001100165,NR_027113	chr6,chr6	+,-	PHACTR2,LOC285740	-10358,-118933
chr5:134730161-134730517	chr5	+	134730338	134730560	True	NM_138609,NM_138610,NM_004893,NM_001040158,NM_178019	chr5,chr5,chr5,chr5,chr5	-,-,-,-,+	H2AFY,H2AFY,H2AFY,H2AFY,CATSPER3	4418,4418,5067,4418,-426806
chr11:36396157-36396639	chr11	+	36396163	36396483	True	NM_024841,NM_001160168,NM_014186	chr11,chr11,chr11	+,+,-	PRR5L,PRR5L,COMMD9	1051,1051,-85164
chr21:46057577-46058106	chr21	+	46057640	46057822	True	NM_198698,NM_181688,NM_198692	chr21,chr21,chr21	-,+,+	KRTAP12-4,KRTAP10-10,KRTAP10-11	16804,-418,8508
chr1:175014345-175014609	chr1	+	175014420	175014610	True	NR_037606,NM_022093	chr1,chr1	-,+	MRPS14,TNN	-21829,22383
chr16:86587248-86588457	chr16	+	86587778	86588372	True	NM_001159380,NM_001159378,NM_001159379,NR_027490,NM_022764,NM_001159377,NR_027489,NR_026674	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	-,-,-,-,-,-,-,+	MTHFSD,MTHFSD,MTHFSD,MTHFSD,MTHFSD,MTHFSD,MTHFSD,FLJ30679	491,523,523,523,523,523,523,553
chr9:112259576-112260122	chr9	+	112259605	112259965	True	NM_001145368,NM_002829,NM_001037293	chr9,chr9,chr9	-,-,+	PTPN3,PTPN3,PALM2	678,678,143102
chr4:186318354-186319270	chr4	+	186318362	186318979	True	NM_181726,NM_018409	chr4,chr4	+,-	ANKRD37,LRP2BP	-573,-18210
chr7:101457767-101458454	chr7	+	101457917	101458343	True	NM_181552,NM_138403,NM_001913,NM_001202543,NM_001202546,NM_001202544,NM_001202545,NM_181500	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,-,+,+,+,+,+,+	CUX1,MYL10,CUX1,CUX1,CUX1,CUX1,CUX1,CUX1	2538,-185341,840,840,944,840,840,840
chr17:60136888-60137835	chr17	+	60136897	60137730	True	NM_001144933,NM_005121	chr17,chr17	+,-	EFCAB3,MED13	309848,4964
chr9:117566965-117568112	chr9	+	117566985	117568034	True	NM_153045,NM_005118	chr9,chr9	+,-	C9orf91,TNFSF15	-193330,424
chr9:35162790-35163442	chr9	+	35162884	35163463	True	NM_006377,NM_025182	chr9,chr9	+,-	UNC13B,KIAA1539	-947,-46991
chr3:13460371-13460997	chr3	+	13460522	13460870	True	NM_024827,NM_024923	chr3,chr3	+,-	HDAC11,NUP210	60844,989
chr9:91941999-91943436	chr9	+	91942194	91943491	True	NM_016848,NM_024077	chr9,chr9	-,+	SHC3,SECISBP2	-148512,-8833
chr20:25601638-25602281	chr20	+	25601661	25602046	True	NM_021067,NM_152667	chr20,chr20	+,-	GINS1,NANP	-213389,2661
chr19:38210867-38211565	chr19	+	38210920	38210985	True	NM_001172226,NM_032689,NM_001172677	chr19,chr19,chr19	+,-,-	ZNF540,ZNF607,ZNF607	-125240,-229,-831
chr12:49581274-49582175	chr12	+	49581299	49582048	True	NM_006009,NM_032704	chr12,chr12	-,+	TUBA1A,TUBA1C	866,76816
chr7:66134038-66134277	chr7	+	66134048	66134256	True	NM_153033,NR_002933	chr7,chr7	+,-	KCTD7,LOC493754	-40231,-90550
chr12:100677376-100678534	chr12	+	100677454	100678215	True	NM_017988,NM_152317	chr12,chr12	+,-	SCYL2,DEPDC4	-15968,-16597
chr3:195867386-195867634	chr3	+	195867387	195867443	True	NR_034088,NM_001128148	chr3,chr3	+,-	LOC401109,TFRC	2063,-58355
chrX:152800550-152801000	chrX	+	152800733	152800873	True	NM_001130997,NM_001001344,NM_021949	chrX,chrX,chrX	-,+,+	FAM58A,ATP2B3,ATP2B3	63809,706,706
chr12:52283312-52284519	chr12	+	52283443	52284471	True	NM_182608,NM_001130015,NM_001013690	chr12,chr12,chr12	+,+,-	ANKRD33,ANKRD33,FIGNL2	-1702,-1702,-57742
chr6:36972183-36972838	chr6	+	36972265	36972649	True	NM_173558,NM_014341	chr6,chr6	+,-	FGD2,MTCH1	773,-18316
chr22:41250895-41252316	chr22	+	41251141	41252077	True	NM_003932,NM_001204827,NM_022098,NM_145174	chr22,chr22,chr22,chr22	-,+,+,-	ST13,XPNPEP3,XPNPEP3,DNAJB7	660,1007,1007,6103
chr1:172501545-172501982	chr1	+	172501572	172501910	True	NM_016227,NM_153747,NM_014283	chr1,chr1,chr1	+,-,+	C1orf9,PIGC,C1orf9	406,-88342,349
chr17:1305259-1306478	chr17	+	1305526	1305852	True	NM_006761,NR_024058,NR_028514	chr17,chr17,chr17	-,-,+	YWHAE,YWHAE,LOC100306951	-1970,-1970,114360
chr19:38715740-38716611	chr19	+	38715905	38716660	True	NM_001135156,NM_004647,NM_001135155,NM_001166103	chr19,chr19,chr19,chr19	-,-,-,+	DPF1,DPF1,DPF1,SPINT2	3707,-1015,-1015,38437
chr6:26271191-26271478	chr6	+	26271250	26271474	True	NM_003525,NM_003534	chr6,chr6	+,-	HIST1H2BI,HIST1H3G	1729,188
chr12:53690490-53691104	chr12	+	53690490	53690918	True	NM_021640,NM_002624,NM_001173466,NM_145897	chr12,chr12,chr12,chr12	+,+,-,+	C12orf10,PFDN5,AAAS,PFDN5	2551,-1314,24550,-1314
chr1:180986451-180986868	chr1	+	180986555	180986731	True	NM_001194999,NM_005819	chr1,chr1	+,-	MR1,STX6	15829,5371
chr7:100662378-100662952	chr7	+	100662406	100662664	True	NM_003378,NM_001040105	chr7,chr7	-,+	VGF,MUC17	146248,699
chr5:176325240-176326027	chr5	+	176325244	176325800	True	NM_133369,NM_002115	chr5,chr5	+,-	UNC5A,HK3	-87735,583
chr15:34610783-34611641	chr15	+	34610783	34611698	True	NM_175741,NM_005135	chr15,chr15	+,-	C15orf55,SLC12A6	26367,24
chr15:43809006-43809229	chr15	+	43809017	43809264	True	NM_002373,NM_005657	chr15,chr15	+,-	MAP1A,TP53BP1	541,-6310
chr1:100715382-100716688	chr1	+	100715706	100716724	True	NM_001130841,NM_001918	chr1,chr1	+,-	RTCD1,DBT	14989,-297
chr12:53716867-53718061	chr12	+	53717391	53718097	True	NM_021640,NM_001173466,NM_015665	chr12,chr12,chr12	+,-,-	C12orf10,AAAS,AAAS	-23972,-1979,-1979
chr17:61820212-61821178	chr17	+	61820330	61821019	True	NM_001003788,NM_153335,NM_007372,NM_001165969,NM_001165970,NM_001003787,NM_001003786	chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,-,-,-,-	STRADA,STRADA,DDX42,STRADA,STRADA,STRADA,STRADA	-1000,-1000,30547,-1000,-1000,-1000,-1000
chrX:65392229-65393486	chrX	+	65392360	65393420	True	NM_014799,NM_007268,NM_001130860,NM_138737	chrX,chrX,chrX,chrX	+,-,+,+	HEPH,VSIG4,HEPH,HEPH	-8302,-132393,-8332,-9978
chr7:44146149-44146493	chr7	+	44146149	44146367	True	NM_001129,NM_001127218	chr7,chr7	+,-	AEBP1,POLD2	-2240,16830
chr2:202047373-202048191	chr2	+	202047492	202048143	True	NM_001230,NM_032977,NM_032974,NM_173822	chr2,chr2,chr2,chr2	+,+,+,-	CASP10,CASP10,CASP10,FAM126B	71,71,71,-111100
chr3:185434974-185435835	chr3	+	185435167	185435859	True	NM_001007225,NR_027317	chr3,chr3	-,+	IGF2BP2,C3orf65	107018,-4178
chr5:143190998-143191769	chr5	+	143191073	143191699	True	NM_021182,NM_001024947	chr5,chr5	+,-	HMHB1,YIPF5	26,358629
chr2:152677341-152678280	chr2	+	152677342	152678100	True	NM_012097,NM_001037174,NM_177985,NM_001177665	chr2,chr2,chr2,chr2	-,-,-,+	ARL5A,ARL5A,ARL5A,RIF1	6966,6966,6966,-410789
chr11:1631145-1631892	chr11	+	1631199	1631695	True	NM_001012708,NM_001001480	chr11,chr11	-,+	KRTAP5-3,KRTAP5-5	-1506,19337
chr17:43921141-43922330	chr17_ctg5_hap1	-	945501	946253	False	NM_175882,NR_024559	chr17_ctg5_hap1,chr17_ctg5_hap1	-,+	IMP5,LOC100128977	-217,-50858
chr17:43921141-43922330	chr17	+	43921286	43922038	True	NM_175882,NR_024559	chr17,chr17	+,-	IMP5,LOC100128977	217,50891
chr12:130390017-130391143	chr12	+	130390128	130391170	True	NM_133448,NM_007197	chr12,chr12	-,+	TMEM132D,FZD10	-1916,255833
chr16:11350794-11351085	chr16	+	11350825	11351077	True	NM_003745,NM_152308	chr16,chr16	-,+	SOCS1,C16orf75	-786,88233
chr3:133294775-133295284	chr3	+	133294792	133295323	True	NM_001134423,NM_001134422,NM_017548,NM_007027	chr3,chr3,chr3,chr3	+,+,+,-	CDV3,CDV3,CDV3,TOPBP1	-1550,-2417,-2417,85465
chr15:59936391-59937272	chr15	+	59936409	59937305	True	NM_004751,NM_004492	chr15,chr15	+,-	GCNT3,GTF2A2	-32493,12485
chr11:78025765-78027275	chr11	+	78025814	78027004	True	NM_020798,NM_012296	chr11,chr11	+,-	USP35,GAB2	-126014,25972
chr7:47842924-47843875	chr7	+	47842954	47843916	True	NM_025031,NM_138295	chr7,chr7	+,-	C7orf69,PKD1L1	-8116,144205
chr10:99382306-99383583	chr10	+	99382786	99383272	True	NM_018425,NM_178832	chr10,chr10	+,-	PI4K2A,MORN4	17170,10122
chr4:8174182-8174570	chr4	+	8174352	8174570	True	NM_001130088,NM_018986	chr4,chr4	-,+	ABLIM2,SH3TC1	-13793,26489
chr2:47052251-47052508	chr2	+	47052305	47052541	True	NR_034099,NR_024452,NM_001171506	chr2,chr2,chr2	+,+,-	LOC388948,LOC100134259,MCFD2	-8549,2461,90516
chr6:31778433-31779951	chr6_qbl_hap6	+	3072394	3073189	False	NM_005345,NM_005527,NM_021177	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	+,-,-	HSPA1A,HSPA1L,LSM2	3748,3356,-4014
chr6:31778433-31779951	chr6_dbb_hap3	+	3064333	3065128	False	NM_005345,NM_005527,NM_021177	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	+,-,-	HSPA1A,HSPA1L,LSM2	3749,3357,-4007
chr6:31778433-31779951	chr6	+	31778746	31779541	True	NM_005345,NM_005527,NM_021177	chr6,chr6,chr6	+,-,-	HSPA1A,HSPA1L,LSM2	3749,3357,-4003
chr6:31778433-31779951	chr6_apd_hap1	+	3093507	3094302	False	NM_005345,NM_005527,NM_021177	chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1	+,-,-	HSPA1A,HSPA1L,LSM2	3749,3357,-4013
chr6:31778433-31779951	chr6_cox_hap2	+	3288327	3289122	False	NM_005345,NM_005527,NM_021177	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,-,-	HSPA1A,HSPA1L,LSM2	3748,3356,-4013
chr11:61349100-61349371	chr11	+	61349099	61349419	True	NM_004200,NR_002775	chr11,chr11	-,+	SYT7,RPLP0P2	-801,33088
chr1:156183414-156183793	chr1	+	156183420	156183665	True	NM_001199654,NM_007221,NM_198406,NM_001199662,NM_001199663,NM_001199661,NM_001199653,NM_001199664	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,+,+,+,+,+	PMF1,PMF1,PAQR6,PMF1-BGLAP,PMF1-BGLAP,PMF1-BGLAP,PMF1,PMF1-BGLAP	-692,-692,34190,-692,-692,-692,-692,-692
chr2:61104880-61105701	chr2	+	61104884	61105665	True	NM_002908,NR_033980	chr2,chr2	+,-	REL,FLJ16341	3086,2845
chr11:64009876-64010466	chr11	+	64009876	64010260	True	NM_057092,NM_138689,NM_003377,NM_004470,NM_000932,NM_001135208,NM_001184883	chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,-,+,+,+,+,+	FKBP2,PPP1R14B,VEGFB,FKBP2,PLCB3,FKBP2,PLCB3	-339,4203,-7661,-1514,8734,-1323,8734
chrX:108979373-108981080	chrX	+	108979382	108980777	True	NM_004458,NM_022977,NM_018698	chrX,chrX,chrX	-,-,+	ACSL4,ACSL4,NXT2	-2761,-2761,-200434
chr12:5414839-5416420	chr12	+	5415216	5416447	True	NM_020373,NM_001102654	chr12,chr12	-,+	ANO2,NTF3	639002,124832
chr16:30416881-30417753	chr16	+	30417131	30417459	True	NM_001142305,NM_016643,NM_052838	chr16,chr16,chr16	+,+,-	ZNF771,ZNF771,SEPT1	1275,1275,-22960
chr12:49584157-49585831	chr12	+	49584159	49585889	True	NM_006009,NM_032704	chr12,chr12	-,+	TUBA1A,TUBA1C	-1298,72975
chr20:17208787-17209429	chr20	+	17208906	17209328	True	NM_001201529,NM_001201528,NM_002594,NM_001195	chr20,chr20,chr20,chr20	+,+,+,-	PCSK2,PCSK2,PCSK2,BFSP1	-1360,-2205,-1360,302735
chr14:58764696-58765013	chr14	+	58764745	58765037	True	NM_023000,NM_023001,NM_002892,NR_029434,NR_029435	chr14,chr14,chr14,chr14,chr14	+,+,+,-,-	ARID4A,ARID4A,ARID4A,FLJ31306,FLJ31306	184,184,184,26,26
chr8:124406079-124406791	chr8	+	124406188	124406618	True	NM_018024,NM_014109	chr8,chr8	+,-	WDYHV1,ATAD2	22346,2137
chr22:35555565-35556051	chr22	+	35555569	35555737	True	NM_001008494,NM_005368	chr22,chr22	+,-	ISX,MB	-93490,457697
chr2:219264972-219265280	chr2	+	219264973	219265061	True	NM_022152,NM_021198,NR_029500,NM_182642	chr2,chr2,chr2,chr2	-,+,+,+	TMBIM1,CTDSP1,MIR26B,CTDSP1	-107693,-546,2307,-210
chr17:73719331-73719798	chr17	+	73719340	73719728	True	NM_000154,NM_000213,NM_001005619,NM_001005731	chr17,chr17,chr17,chr17	-,+,+,+	GALK1,ITGB4,ITGB4,ITGB4	41602,-1875,1047,-1875
chr8:17941902-17942262	chr8	+	17941977	17942257	True	NM_177924,NM_001127505,NM_004315,NM_001160179	chr8,chr8,chr8,chr8	-,-,-,+	ASAH1,ASAH1,ASAH1,NAT1	-98,300,300,85713
chr20:29628754-29630136	chr20	+	29628834	29630170	True	NM_001037731,NR_003579	chr20,chr20	-,+	DEFB116,FRG1B	266268,-17010
chr7:44581221-44581592	chr7	+	44581326	44581496	True	NM_001101648,NM_001003941,NM_013389	chr7,chr7,chr7	-,+,-	NPC1L1,OGDH,NPC1L1	-412,64624,-412
chr1:161736198-161736484	chr1	+	161736240	161736532	True	NM_007348,NR_002595	chr1,chr1	+,-	ATF6,RPL31P11	-207,-81198
chr2:152265253-152265851	chr2	+	152265377	152265735	True	NM_004688,NM_001177663,NM_001177665,NM_001177664,NM_018151	chr2,chr2,chr2,chr2,chr2	-,+,+,+,+	NMI,RIF1,RIF1,RIF1,RIF1	-118947,661,868,664,661
chr5:133706862-133707117	chr5	+	133706917	133707165	True	NM_016508,NM_003337,NM_001113575	chr5,chr5,chr5	-,+,-	CDKL3,UBE2B,CDKL3	-4152,-98,-4152
chr13:20801793-20802713	chr13	+	20801998	20802589	True	NM_001110221,NM_001110219,NM_001190965,NM_006783,NM_001110220	chr13,chr13,chr13,chr13,chr13	-,-,+,-,-	GJB6,GJB6,ZMYM2,GJB6,GJB6	4002,4002,-269075,2840,4002
chr19:30301452-30302028	chr19	+	30301510	30301911	True	NM_001238,NM_057182,NM_031448	chr19,chr19,chr19	+,+,-	CCNE1,CCNE1,C19orf12	989,1649,-95058
chr17:79883288-79883538	chr17	+	79883306	79883410	True	NM_002359,NM_016538,NR_015454,NM_032711	chr17,chr17,chr17,chr17	-,-,+,-	MAFG,SIRT7,LOC92659,MAFG	2228,-7248,2294,-1898
chrX:40146152-40146374	chrX	+	40146174	40146309	True	NM_001123384,NM_005765	chrX,chrX	-,+	BCOR,ATP6AP2	-109592,293906
chr17:7295802-7296440	chr17	+	7295871	7296121	True	NM_020360,NM_003985,NM_001201576	chr17,chr17,chr17	-,+,-	PLSCR3,TNK1,PLSCR3	2091,-11564,2091
chr7:153999653-154000591	chr7	+	153999674	154000589	True	NM_001936,NM_007349	chr7,chr7	+,-	DPP6,PAXIP1	1757,794143
chr2:188345597-188346448	chr2	+	188345597	188346340	True	NM_005795,NM_177454	chr2,chr2	-,+	CALCRL,FAM171B	-32576,-786866
chr3:160167630-160167929	chr3	+	160167667	160167821	True	NR_029525,NM_173084	chr3,chr3	+,-	MIR16-2,TRIM59	-45185,-41
chr14:102785130-102785834	chr14	+	102785237	102785793	True	NM_014226,NM_018335	chr14,chr14	-,+	RAGE,ZNF839	-13706,302
chr4:122840727-122842397	chr4	+	122840735	122842280	True	NM_003305,NM_005033	chr4,chr4	-,+	TRPC3,EXOSC9	12038,-118314
chr16:88732784-88734143	chr16	+	88732989	88733938	True	NM_002461,NR_024399,NR_024402	chr16,chr16,chr16	-,+,+	MVD,MGC23284,MGC23284	-3494,-3259,-3259
chr10:13391889-13392153	chr10	+	13391920	13392057	True	NM_001195604,NM_012247,NM_001195602,NM_182751	chr10,chr10,chr10,chr10	-,-,-,+	SEPHS1,SEPHS1,SEPHS1,MCM10	-1622,-1622,-1622,-188417
chr16:74806022-74806932	chr16	+	74806069	74806781	True	NM_024306,NM_032268	chr16,chr16	-,+	FA2H,ZNRF1	1998,226133
chr5:122181622-122182863	chr5	+	122181737	122182796	True	NM_000943,NM_014035	chr5,chr5	-,+	PPIC,SNX24	189679,-628
chr16:525080-525437	chr16	+	525090	525406	True	NR_024121,NM_001142272	chr16,chr16	-,+	NCRNA00235,RAB11FIP3	52051,-291
chr1:210439208-210439525	chr1	+	210439379	210439523	True	NR_024337,NM_019605	chr1,chr1	-,+	C1orf133,SERTAD4	-31913,-33239
chr5:128309501-128309783	chr5	+	128309640	128309830	True	NM_014031,NM_001999,NM_001017372	chr5,chr5,chr5	+,-,+	SLC27A6,FBN2,SLC27A6	-8483,-435905,-8480
chr15:25647389-25649350	chr15	+	25647466	25648695	True	NM_130838,NR_001295,NM_000462	chr15,chr15,chr15	-,+,-	UBE3A,SNORD109A,UBE3A	2008,-124027,5150
chr12:50506092-50506407	chr12	+	50506195	50506411	True	NM_032901,NM_147190,NM_005276	chr12,chr12,chr12	+,-,+	C12orf62,LASS5,GPD1	-346,54736,-8445
chr19:12793304-12793849	chr19	+	12793432	12793879	True	NM_013407,NM_032332,NM_001930,NM_013406	chr19,chr19,chr19,chr19	-,+,-,-	DHPS,WDR83,DHPS,DHPS	-755,-12966,-755,-755
chr14:31024271-31025634	chr14	+	31024561	31025604	True	NM_017769,NR_030354	chr14,chr14	+,-	G2E3,MIR624	2724,458394
chrX:41775107-41775810	chrX	+	41775579	41775859	True	NM_003688,NM_001126055,NM_001126054,NM_080817	chrX,chrX,chrX,chrX	-,-,-,+	CASK,CASK,CASK,GPR82	6480,6480,6480,-192222
chr4:56264190-56265235	chr4	+	56264190	56265165	True	NM_018475,NR_037969	chr4,chr4	+,-	TMEM165,LOC100506462	-2155,-12443
chr3:46283296-46283973	chr3	+	46283316	46284007	True	NM_001295,NM_001837,NM_178329,NM_001164680,NM_178328	chr3,chr3,chr3,chr3,chr3	-,+,+,+,+	CCR1,CCR3,CCR3,CCR3,CCR3	-33484,-74,-74,-74,-74
chr19:3934950-3935866	chr19	+	3935172	3935652	True	NM_170678,NR_030367	chr19,chr19	+,-	ITGB1BP3,MIR637	-2129,25908
chr1:32042349-32042832	chr1	+	32042356	32042700	True	NM_001204414,NM_001204415,NM_022164,NR_033688	chr1,chr1,chr1,chr1	+,+,+,-	TINAGL1,TINAGL1,TINAGL1,PEF1	-321,1045,-321,67568
chr2:95872585-95872931	chr2	+	95872668	95872928	True	NM_021088,NM_032788	chr2,chr2	+,-	ZNF2,ZNF514	-41537,-47405
chr15:76629493-76630063	chr15	+	76629522	76629987	True	NM_001127716,NM_145805	chr15,chr15	-,+	ETFA,ISL2	-25712,-430
chr6:13489050-13490020	chr6	+	13489154	13489883	True	NM_033069,NM_018988,NM_031244	chr6,chr6,chr6	-,-,+	C6orf114,GFOD1,SIRT5	-2739,-1367,84908
chr11:31839726-31839932	chr11	+	31839773	31839981	True	NM_001127612,NR_033971,NM_001604,NM_000280	chr11,chr11,chr11,chr11	-,+,-,-	PAX6,DKFZp686K1684,PAX6,PAX6	-264,-1710,-6894,-6894
chr5:173161003-173161364	chr5	+	173161017	173161359	True	NM_030627,NM_138369	chr5,chr5	+,-	CPEB4,BOD1	153971,-117351
chr8:90922371-90923712	chr8	+	90922370	90923502	True	NM_004337,NM_002485,NM_001126111	chr8,chr8,chr8	+,-,+	OSGIN2,NBN,OSGIN2	-8332,73447,-7666
chr8:142139445-142139745	chr8	+	142139576	142139790	True	NM_001080431,NM_014957	chr8,chr8	-,+	SLC45A4,DENND3	98933,-907
chr1:176172395-176173986	chr1	+	176172489	176173792	True	NM_021936,NM_001001740,NM_022457	chr1,chr1,chr1	+,-,-	PAPPA2,RFWD2,RFWD2	258514,2635,2635
chr17:7120817-7121038	chr17	+	7120885	7121069	True	NM_001365,NR_029896,NM_001128827,NM_000018,NM_001033859	chr17,chr17,chr17,chr17,chr17	-,-,-,+,+	DLG4,MIR324,DLG4,ACADVL,ACADVL	2350,5679,43,2083,2083
chr18:29037749-29038538	chr18	+	29038068	29038562	True	NM_004775,NM_001944	chr18,chr18	-,+	B4GALT6,DSG3	226174,-10394
chr2:131860389-131861243	chr2	+	131860729	131860960	True	NM_001100623,NM_017958,NM_001009993	chr2,chr2,chr2	+,+,-	PLEKHB2,PLEKHB2,FAM168B	1459,1459,-9725
chr10:104626663-104627258	chr10	+	104626784	104627067	True	NM_000102,NM_020682	chr10,chr10	-,+	CYP17A1,AS3MT	-29494,2142
chr8:102139555-102139993	chr8	+	102139599	102139893	True	NM_001042511,NR_033962	chr8,chr8	-,+	ZNF706,FLJ42969	78030,-75368
chr2:234192952-234193785	chr2	+	234193443	234193833	True	NR_003008,NR_003006,NM_018218	chr2,chr2,chr2	+,+,-	SCARNA5,SCARNA6,USP40	-9123,3488,280453
chr11:32604724-32605335	chr11	+	32604906	32605192	True	NM_024426,NM_006360	chr11,chr11	-,+	WT1,EIF3M	-147825,198
chr17:7185986-7186491	chr17	+	7186073	7186457	True	NM_001042,NM_015982	chr17,chr17	+,-	SLC2A4,YBX2	-1083,11469
chr4:1245372-1245624	chr4	+	1245383	1245621	True	NM_001012614,NR_033339,NM_001328	chr4,chr4,chr4	-,+,-	CTBP1,C4orf42,CTBP1	-2475,-2206,-2475
chr8:144924085-144925326	chr8	+	144924322	144925352	True	NR_033849,NM_178564	chr8,chr8	+,-	LOC100128338,NRBP2	-108063,-1176
chr4:2627037-2627499	chr4	+	2627160	2627391	True	NM_003704,NM_001161527	chr4,chr4	+,-	FAM193A,TNIP2	-52,130412
chr6:160553064-160553952	chr6	+	160553298	160553814	True	NM_003058,NM_153187	chr6,chr6	-,+	SLC22A2,SLC22A1	126201,-10486
chr1:46928788-46929817	chr1	+	46928848	46929677	True	NM_147192,NM_001097611	chr1,chr1	+,-	DMBX1,KNCN	42990,87260
chr5:179719725-179720037	chr5	+	179719742	179719808	True	NM_001135044,NM_139068,NM_139069,NM_015455,NM_139070,NM_002752	chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,+,-,-	MAPK9,MAPK9,MAPK9,CNOT6,MAPK9,MAPK9	-671,-671,-671,201608,-671,-671
chr4:39634836-39635790	chr4	+	39634962	39635544	True	NM_174921,NM_001111112	chr4,chr4	-,+	C4orf34,UBE2K	4987,64119
chr3:127349837-127350187	chr3	+	127349899	127350219	True	NM_015720,NM_001142646	chr3,chr3	+,-	PODXL2,TPRA1	-1911,-40331
chr18:32954040-32955865	chr18	+	32954183	32955604	True	NM_145756,NR_024566	chr18,chr18	-,+	ZNF396,ZNF271	1760,-84000
chr6:36922664-36923085	chr6	+	36922763	36923132	True	NM_014341,NM_001199159,NM_153370	chr6,chr6,chr6	-,+,+	MTCH1,PI16,PI16	30867,-6775,-605
chr2:15732070-15732280	chr2	+	15732176	15732296	True	NM_004939,NM_015909	chr2,chr2	+,-	DDX1,NBAS	-457,-30722
chr19:1861714-1862108	chr19	+	1861870	1862058	True	NR_034114,NM_031918	chr19,chr19	+,-	LOC100288123,KLF16	-39833,1556
chr1:70820671-70821621	chr1	+	70820720	70821672	True	NM_001031693,NM_030816,NM_001036645,NM_001036646,NR_027404	chr1,chr1,chr1,chr1,chr1	+,-,+,+,+	HHLA3,ANKRD13C,HHLA3,HHLA3,HHLA3	-278,-303,-278,-278,-278
chr19:2267360-2268260	chr19	+	2267751	2268127	True	NM_004152,NM_144616	chr19,chr19	+,-	OAZ1,JSRP1	1392,-11329
chr19:33183349-33185173	chr19	+	33183407	33185213	True	NM_001105570,NM_032139	chr19,chr19	+,-	NUDT19,ANKRD27	-591,-17305
chr2:135773681-135775581	chr2	+	135774113	135775445	True	NM_001018046,NM_025052,NM_001172435	chr2,chr2,chr2	-,-,+	YSK4,YSK4,RAB3GAP1	6862,6862,34389
chr13:27822408-27823780	chr13	+	27822759	27823566	True	NM_000982,NR_002574,NM_182488,NR_026911,NR_002575	chr13,chr13,chr13,chr13,chr13	+,+,-,+,+	RPL21,SNORD102,USP12,RPL21P28,SNORA27	2125,5634,-76726,2126,5971
chr14:94911285-94912740	chr14	+	94911342	94912594	True	NM_001080451,NM_006215	chr14,chr14	-,+	SERPINA11,SERPINA4	6578,115188
chr17:15850255-15851463	chr17	+	15850277	15851361	True	NM_000676,NM_001042697	chr17,chr17	+,-	ADORA2B,ZSWIM7	-2097,51695
chr15:69855108-69855998	chr15	+	69855126	69855954	True	NR_026979,NR_030714	chr15,chr15	+,-	LOC145837,MIR629	-1118,515903
chr11:128732769-128734072	chr11	+	128732928	128733914	True	NM_153765,NM_153764,NM_153767,NM_153766,NM_000890	chr11,chr11,chr11,chr11,chr11	-,-,-,-,+	KCNJ1,KCNJ1,KCNJ1,KCNJ1,KCNJ5	3404,3404,3404,3404,27398
chr2:234463128-234464372	chr2	+	234463128	234464255	True	NM_019076,NM_018218	chr2,chr2	+,-	UGT1A8,USP40	62035,10046
chr22:20617518-20619148	chr22	+	20618206	20618852	True	NM_015672,NM_003426	chr22,chr22	-,+	RIMBP3,ZNF74	-156420,129627
chr22:20617518-20619148	chr22	-	18758683	18759329	False	NM_017414,NR_003267	chr22,chr22	+,-	USP18,GGT3P	-125976,20198
chr22:20617518-20619148	chr22	-	20364294	20364362	False	NR_003563,NR_026919	chr22,chr22	-,+	PI4KAP1,LOC150197	34386,-170490
chr22:20617518-20619148	chr22	-	21560285	21560353	False	NR_024583,NR_002829	chr22,chr22	+,-	POM121L8P,P2RX6P	76360,-161747
chr13:52770156-52770526	chr13	+	52770314	52770435	True	NR_002816,NM_021645	chr13,chr13	-,+	THSD1P1,UTP14C	-1712,-171538
chr3:52016911-52017154	chr3	+	52016950	52017026	True	NM_001198898,NM_001198896,NM_000666,NM_001198895,NM_001146314,NR_027476,NM_015407,NM_001198897,NR_037192,NM_032750	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,-,-,+,+,+,-	ACY1,ACY1,ACY1,ACY1,ABHD14B,ABHD14B,ABHD14A,ACY1,ABHD14A-ACY1,ABHD14B	273,273,273,273,-8304,-8304,-7959,273,-7959,-8304
chr15:77221179-77222694	chr15	+	77221191	77222714	True	NM_020843,NM_002902	chr15,chr15	-,+	SCAPER,RCN2	-44974,1247
chr17:30435646-30436583	chr17	+	30435657	30436642	True	NM_001033566,NR_002222	chr17,chr17	+,-	RHOT1,ARGFXP2	32830,42008
chr11:58724250-58725495	chr11	+	58724256	58725538	True	NR_033853,NM_080661	chr11,chr11	-,+	LOC283194,GLYATL1	100437,-13585
chr17:38184660-38185089	chr17	+	38184679	38185111	True	NR_003692,NM_001079518	chr17,chr17	+,-	SNORD124,MED24	-947,25828
chr15:90294725-90295049	chr15	+	90294832	90295098	True	NM_018670,NM_001039958	chr15,chr15	-,+	MESP1,MESP2	-292,24490
chr7:2721048-2721797	chr7	+	2721112	2721784	True	NM_133463,NM_152743	chr7,chr7	+,-	AMZ1,BRAT1	-2000,-125720
chr7:150501995-150502882	chr7	+	150502009	150502902	True	NM_018487,NM_001101311,NM_001101314,NM_014020,NM_001101312	chr7,chr7,chr7,chr7,chr7	+,-,-,-,-	TMEM176A,TMEM176B,TMEM176B,TMEM176B,TMEM176B	-4206,-4388,-4388,-3561,-4388
chr13:112720791-112721026	chr13	+	112720869	112720937	True	NM_006322,NM_005986	chr13,chr13	-,+	TUBGCP3,SOX1	521594,975
chr16:2060020-2060226	chr16	+	2060025	2060252	True	NM_178167,NM_001099456	chr16,chr16	-,+	ZNF598,NPW	-262,9268
chrX:49641317-49642960	chrX	+	49641562	49642478	True	NM_001145073,NR_026742	chrX,chrX	+,-	USP27X,LOC158572	1991,1531
chr10:120101902-120102939	chr10	+	120102060	120102867	True	NM_022063,NM_001134672,NR_026940	chr10,chr10,chr10	-,-,+	C10orf84,C10orf84,CASC2	-221,-221,-295779
chr7:2880876-2882813	chr7	+	2880895	2882606	True	NM_133463,NM_007353	chr7,chr7	+,-	AMZ1,GNA12	-161785,1414
chr11:17408402-17409488	chr11	+	17408615	17409535	True	NM_000525,NM_001202439,NM_001166290	chr11,chr11,chr11	-,+,-	KCNJ11,DKFZp686O24166,KCNJ11	721,-35357,1393
chr20:49574542-49574776	chr20	+	49574577	49574755	True	NM_003859,NM_014484	chr20,chr20	-,+	DPM1,MOCS3	355,607
chr5:147130793-147132790	chr5	+	147131118	147132835	True	NM_014790,NM_054023	chr5,chr5	-,+	JAKMIP2,SCGB3A2	29474,125438
chr6:163835063-163835374	chr6	+	163835202	163835280	True	NM_206854,NM_206855,NM_006775,NR_037593,NM_206853	chr6,chr6,chr6,chr6,chr6	+,+,+,-,+	QKI,QKI,QKI,LOC100526820,QKI	394,394,394,-220,394
chr8:119122272-119122692	chr8	+	119122296	119122636	True	NM_080651,NM_000127	chr8,chr8	+,-	MED30,EXT1	-589382,1472
chrX:71934211-71934773	chrX	+	71934217	71934703	True	NM_002637,NM_001122670,NM_001080851,NM_001172436	chrX,chrX,chrX,chrX	-,-,+,-	PHKA1,PHKA1,DMRTC1B,PHKA1	-188,-188,130172,-188
chr11:72377869-72379625	chr11	+	72378190	72379531	True	NM_033388,NM_001146209,NM_002599	chr11,chr11,chr11	+,-,-	ATG16L2,PDE2A,PDE2A	145919,629,6015
chr1:152282655-152282881	chr1	+	152282659	152282863	True	NM_002016,NM_178438	chr1,chr1	-,+	FLG,LCE5A	14866,200456
chr11:118450257-118451802	chr11	+	118450589	118451586	True	NM_001655,NM_001142281,NM_020153	chr11,chr11,chr11	+,+,-	ARCN1,ARCN1,IFT46	-7551,-7551,-13798
chr9:86153665-86154073	chr9	+	86153814	86154102	True	NM_174938,NM_001001551	chr9,chr9	-,+	FRMD3,C9orf103	-466,83930
chr11:134279884-134281349	chr11	+	134279889	134281105	True	NM_018644,NR_033852	chr11,chr11	-,+	B3GAT1,LOC283177	757,25270
chr4:83812521-83812933	chr4	+	83812709	83812950	True	NM_001191049,NM_024672,NM_014933,NM_016211,NM_001077206,NR_034075,NM_001077207,NR_034076,NM_001077208,NR_034077	chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4	-,+,-,-,-,-,-,-,-,-	SEC31A,THAP9,SEC31A,SEC31A,SEC31A,LOC100499177,SEC31A,LOC100499177,SEC31A,LOC100499177	-374,8886,-290,-297,-297,9170,-297,9170,-297,9170
chr7:84718915-84719657	chr7	+	84719297	84719653	True	NM_000840,NM_152754	chr7,chr7	+,-	GRM3,SEMA3D	1553576,31644
chr12:123449323-123449603	chr12	+	123449357	123449619	True	NM_019625,NM_019624,NM_024623	chr12,chr12,chr12	-,-,+	ABCB9,ABCB9,OGFOD2	1487,1487,9734
chr8:144898387-144898613	chr8	+	144898494	144898586	True	NR_033849,NM_182706,NR_030633,NM_015356	chr8,chr8,chr8,chr8	+,-,-,-	LOC100128338,SCRIB,MIR937,SCRIB	-82235,-945,-3282,-945
chr19:23869646-23869961	chr19	+	23869850	23869982	True	NM_138330,NR_003662	chr19,chr19	-,+	ZNF675,RPSAP58	85,75833
chr1:156029591-156030209	chr1	+	156030024	156030136	True	NM_020131,NM_014017,NM_001145264,NM_020387	chr1,chr1,chr1,chr1	-,+,+,+	UBQLN4,LAMTOR2,LAMTOR2,RAB25	-6508,-5558,-5558,829
chr1:156029591-156030209	chr1	+	156031318	156031794	False	NM_020131,NM_014017,NM_001145264,NM_020387	chr1,chr1,chr1,chr1	-,+,+,+	UBQLN4,LAMTOR2,LAMTOR2,RAB25	-7802,-7276,-7276,-827
chr15:20767468-20767939	chr15	+	20767541	20767975	True	NM_001145004,NR_027411	chr15,chr15	-,+	GOLGA6L6,GOLGA8C	-20427,82
chr15:20767468-20767939	chr15	+	28624023	28624085	False	NM_004667,NR_033351,NR_033353	chr15,chr15,chr15	-,+,+	HERC2,GOLGA8F,GOLGA8G	-56728,-290,-290
chr15:20767468-20767939	chr15	-	28777841	28777903	False	NR_036443,NR_033351,NR_033353	chr15,chr15,chr15	+,-,-	HERC2P9,GOLGA8F,GOLGA8G	121684,290,290
chrX:129539275-129539919	chrX	+	129539455	129539758	True	NM_016024,NM_178471	chrX,chrX	+,-	RBMX2,GPR119	-3568,-19944
chr4:71705618-71705971	chr4	+	71705669	71705737	True	NM_001098477,NM_173468,NM_002092	chr4,chr4,chr4	-,+,-	GRSF1,MOBKL1A,GRSF1	-449,62326,-42
chr1:31409767-31410014	chr1	+	31409792	31410042	True	NR_033295,NR_004054,NR_002762	chr1,chr1,chr1	-,-,+	SNORD103B,SNORD103A,PRO0611	-1169,-1169,50869
chr6:24719314-24719658	chr6	+	24719458	24719660	True	NM_030939,NM_018473	chr6,chr6	-,+	C6orf62,ACOT13	-55,-52254
chr22:26135789-26136282	chr22	+	26135898	26136288	True	NM_001135772,NM_032608	chr22,chr22	-,+	LRP5L,MYO18B	-358354,1831
chrX:100471564-100472854	chrX	+	100471605	100472874	True	NM_001171184,NM_001939,NM_001168474	chrX,chrX,chrX	+,+,-	DRP2,DRP2,TAF7L	2058,2058,73502
chr20:17515587-17516983	chr20	+	17515696	17516946	True	NM_001011546,NM_001195	chr20,chr20	+,-	DSTN,BFSP1	33652,-3683
chr17:1013372-1013619	chr17	+	1013527	1013593	True	NM_001092,NM_013337	chr17,chr17	-,+	ABR,TIMM22	-1203,-113221
chr17:79138739-79138950	chr17	+	79138787	79138999	True	NR_027255,NM_001080395	chr17,chr17	+,-	LOC388428,AATK	307,923
chr19:36209472-36209681	chr19	+	36209487	36209641	True	NM_014727,NM_024660,NM_014383	chr19,chr19,chr19	+,-,+	MLL4,IGFLR1,ZBTB32	-617,23760,-5708
chr22:21385593-21386092	chr22	+	21385622	21386080	True	NM_004173,NR_027006	chr22,chr22	-,+	SLC7A4,LOC400891	817,14168
chr2:45234804-45235285	chr2	+	45234808	45235194	True	NM_005413,NM_016932	chr2,chr2	+,-	SIX3,SIX2	-65822,1398
chr16:682216-682455	chr16	+	682330	682398	True	NM_001040165,NM_001040160,NM_032366,NM_001040162,NM_053284,NM_138418,NM_001040161	chr16,chr16,chr16,chr16,chr16,chr16,chr16	-,-,-,-,+,+,-	C16orf13,C16orf13,C16orf13,C16orf13,WFIKKN1,FAM195A,C16orf13	3999,3999,3999,3999,-1369,9450,3999
chr6:27844648-27845176	chr6	+	27844887	27845002	True	NM_003546,NM_003511,NM_003533,NM_005322	chr6,chr6,chr6,chr6	-,+,-,-	HIST1H4L,HIST1H2AL,HIST1H3I,HIST1H1B	-3598,-11833,-4788,-9528
chr20:46615079-46615706	chr20	+	46615178	46615494	True	NR_026958,NM_198596	chr20,chr20	+,-	LOC284749,SULF2	373159,-199818
chr12:122036013-122036616	chr12	+	122036176	122036617	True	NM_032590,NM_032790	chr12,chr12	-,+	KDM2B,ORAI1	-17256,27837
chr2:234661805-234663594	chr2	+	234662010	234663254	True	NR_037695,NR_037694,NR_037696,NM_001001394,NM_000463	chr2,chr2,chr2,chr2,chr2	-,-,-,-,+	LOC100286922,LOC100286922,LOC100286922,DNAJB3,UGT1A1	788,788,788,-9349,5664
chr19:3765420-3765750	chr19	+	3765508	3765583	True	NM_004886,NM_172251,NM_032753	chr19,chr19,chr19	-,+,-	APBA3,MRPL54,RAX2	-3835,-2894,6697
chr11:65647320-65647734	chr11	+	65647398	65647756	True	NR_037718,NM_198897,NM_004214,NM_016938,NM_001335	chr11,chr11,chr11,chr11,chr11	-,-,-,-,+	EFEMP2,FIBP,FIBP,EFEMP2,CTSW	-6993,8304,8304,-6993,-165
chr17:55979820-55981179	chr17	+	55979824	55980809	True	NM_080677,NM_017949	chr17,chr17	+,-	DYNLL2,CUEDC1	179970,-2
chrX:100183972-100184234	chrX	+	100183978	100184234	True	NM_212559,NM_001012990	chrX,chrX	-,+	XKRX,ARL13A	-80,40462
chr8:102804914-102805348	chr8	+	102804930	102805254	True	NM_024915,NM_032041	chr8,chr8	+,-	GRHL2,NCALD	-300313,-1491
chr19:20841049-20841757	chr19	+	20841156	20841788	True	NM_001076675,NR_034060,NM_145297	chr19,chr19,chr19	-,+,-	ZNF626,ZNF85,ZNF626	2672,264270,2672
chr5:81008394-81008597	chr5	+	81008446	81008522	True	NM_001131028,NM_012446	chr5,chr5	+,-	ATG10,SSBP2	259321,38606
chr16:89628470-89628773	chr16	+	89628514	89628820	True	NM_033251,NR_002450,NM_000977,NM_013275	chr16,chr16,chr16,chr16	+,+,+,-	RPL13,SNORD68,RPL13,ANKRD11	-1434,-727,-1475,-71545
chr13:58204769-58204991	chr13	+	58204771	58205007	True	NM_001040429,NM_030932	chr13,chr13	+,-	PCDH17,DIAPH3	781,2382386
chr9:33813590-33814604	chr9	+	33813732	33814644	True	NR_023917,NM_017811	chr9,chr9	-,+	PTENP1,UBE2R2	-136314,2537
chr7:81390623-81391126	chr7	+	81390653	81391069	True	NM_001010934,NM_001010932,NM_001010933,NM_001127444,NM_001010931,NM_000601	chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,+,-,-	HGF,HGF,HGF,CD36,HGF,HGF	8439,8439,8439,-1114949,8439,8439
chr11:64061011-64061231	chr11	+	64061010	64061082	True	NM_001039496,NM_020155,NM_001177358,NM_001170880,NM_004322,NM_001170881,NM_001170726,NM_033310,NM_032989	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,-,+,+,+,-	C11orf20,GPR137,GPR137,GPR137,BAD,GPR137,GPR137,KCNK4,BAD	6780,-7487,-8786,-7487,-8834,-8784,-9258,-2276,-8834
chr16:23765287-23765977	chr16	+	23765367	23765743	True	NM_033266,NM_022097	chr16,chr16	-,+	ERN2,CHP2	-40546,204
chr6:37667675-37669182	chr6	+	37667773	37669149	True	NM_153487,NM_021943	chr6,chr6	-,+	MDGA1,ZFAND3	-2007,118157
chr19:52552195-52552918	chr19	+	52552317	52552961	True	NM_024840,NM_014650	chr19,chr19	+,-	ZNF613,ZNF432	-121680,-244
chr5:166708204-166708723	chr5	+	166708407	166708730	True	NM_001122679,NR_029520	chr5,chr5	+,-	ODZ2,MIR103-1	3112,1279303
chr2:217475957-217476677	chr2	+	217475991	217476696	True	NM_000597,NM_000599	chr2,chr2	+,-	IGFBP2,IGFBP5	21430,83629
chr21:34398276-34398618	chr21	+	34398293	34398549	True	NR_024102,NM_005806	chr21,chr21	-,+	C21orf54,OLIG2	144042,-105
chr3:49378971-49380405	chr3	+	49379463	49380055	True	NM_003363,NM_199443,NR_036233	chr3,chr3,chr3	-,-,+	USP4,USP4,MIR4271	-1927,-1927,-67961
chr19:42817015-42817222	chr19	+	42817192	42817270	True	NM_173633,NM_001145940	chr19,chr19	+,-	TMEM145,PAFAH1B3	206,-10240
chr5:1544744-1546046	chr5	+	1544748	1546072	True	NM_024830,NM_004553	chr5,chr5	-,+	LPCAT1,NDUFS6	-20672,255423
chr3:183892102-183892601	chr3	+	183892128	183892564	True	NM_005787,NM_001025205,NM_004068	chr3,chr3,chr3	-,+,+	ALG3,AP2M1,AP2M1	74245,69,69
chr1:201120962-201121168	chr1	+	201120968	201121216	True	NM_001164586,NM_016456	chr1,chr1	+,-	IGFN1,TMEM9	38736,2466
chr10:46170953-46171345	chr10	+	46170952	46171042	True	NM_174890,NM_001169106,NM_001128324	chr10,chr10,chr10	-,+,-	ANUBL1,FAM21C,ANUBL1	-2701,51605,-2701
chr14:103245088-103246554	chr14	+	103245137	103246284	True	NM_145726,NM_152326,NM_001199427,NM_003300,NM_145725	chr14,chr14,chr14,chr14,chr14	+,-,+,+,+	TRAF3,ANKRD9,TRAF3,TRAF3,TRAF3	-1372,-269009,-1372,-1372,-1372
chr14:31341152-31343114	chr14	+	31341468	31343091	True	NM_004086,NM_001135058,NR_030354	chr14,chr14,chr14	+,+,-	COCH,COCH,MIR624	649,649,140910
chr7:45018234-45018564	chr7	+	45018237	45018561	True	NR_002952,NR_003697,NM_033054,NR_030770	chr7,chr7,chr7,chr7	-,-,-,+	SNORA9,C7orf40,MYO1G,CCM2	6598,7748,193,20783
chr2:26257787-26259121	chr2	+	26257789	26259168	True	NM_002254,NM_016131	chr2,chr2	-,+	KIF3C,RAB10	-52346,-1111
chr1:65213408-65213821	chr1	+	65213517	65213833	True	NM_002227,NM_018211	chr1,chr1	-,+	JAK1,RAVER2	218408,-2800
chr7:74985855-74987744	chr7	+	74987369	74987645	True	NR_003614,NM_001002840,NM_018991	chr7,chr7,chr7	-,+,+	PMS2L2,STAG3L1,STAG3L1	620,801,801
chr7:74985855-74987744	chr7	-	72477249	72477525	False	NM_001013739,NR_003614	chr7,chr7	-,+	STAG3L3,PMS2L2	-794,-620
chr15:65925852-65927624	chr15	+	65926095	65927540	True	NM_001136043,NM_004727	chr15,chr15	-,+	C15orf44,SLC24A1	-22626,-11876
chr18:14393474-14393696	chr18	+	14393475	14393703	True	NR_024076,NR_026756	chr18,chr18	-,+	CXADRP3,LOC284233	105052,-56104
chr18:14393474-14393696	chr21	-	15134861	15134943	False	NM_174981,NR_026755	chr21,chr21	+,-	POTED,C21orf15	-152414,85792
chr3:110789977-110790182	chr3	+	110790031	110790113	True	NM_024508,NM_015480	chr3,chr3	-,+	ZBED2,PVRL3	524103,751
chr1:110197191-110198052	chr1	+	110197197	110197852	True	NM_000850,NM_147148,NR_024538,NM_005272	chr1,chr1,chr1,chr1	+,+,+,-	GSTM4,GSTM4,GSTM4,GNAT2	845,845,845,-41492
chr9:136212641-136214092	chr9	+	136212673	136213937	True	NM_133640,NM_000972,NM_006753,NM_181491,NR_000017,NR_002447,NM_003172,NM_017503,NR_002448,NR_000016	chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,+,-,-,+,+,-,+,+,+	MED22,RPL7A,SURF6,MED22,SNORD36B,SNORD24,SURF1,SURF2,SNORD36A,SNORD36C	1085,1131,-9626,1085,3011,2313,9474,9483,3373,3763
chr6:25105466-25106876	chr6	+	25105486	25106877	True	NR_002174,NM_001173977	chr6,chr6	-,+	CMAH,LRRC16A	31224,172778
chr18:64275261-64276764	chr18	+	64275435	64276801	True	NM_004361,NM_021153	chr18,chr18	+,-	CDH7,CDH19	-857340,-4219
chr19:16145144-16145463	chr19	+	16145163	16145507	True	NR_024336,NR_024335,NM_021187	chr19,chr19,chr19	+,+,-	FLJ25328,FLJ25328,CYP4F11	75,-691,-99487
chr17:72244283-72244937	chr17	+	72244614	72244930	True	NR_026914,NM_052869	chr17,chr17	-,+	MGC16275,TTYH2	-35154,-160
chr1:170519219-170519419	chr1	+	170519314	170519443	True	NR_027397,NR_026957	chr1,chr1	+,-	GORAB,LOC284688	-18110,-265965
chr16:67530561-67530766	chr16	+	67530565	67530715	True	NM_001138,NM_024519	chr16,chr16	-,+	AGRP,FAM65A	-12849,32001
chr11:102946395-102947732	chr11	+	102946427	102947606	True	NM_001080463,NM_032299	chr11,chr11	+,-	DYNC2H1,DCUN1D5	32553,15395
chr4:184580612-184581957	chr4	+	184580721	184581839	True	NM_199053,NM_152682,NM_021942	chr4,chr4,chr4	+,-,+	C4orf41,RWDD4,C4orf41	-326,-390,-326
chr13:113632242-113633377	chr13	+	113632463	113633415	True	NM_024979,NR_034002,NM_001112732	chr13,chr13,chr13	+,-,+	MCF2L,MCF2L-AS1,MCF2L	239,-9511,-9757
chr8:28557116-28558100	chr8	+	28557366	28557891	True	NM_001172562,NM_001440	chr8,chr8	-,+	INTS9,EXTL3	189592,1261
chr1:43614401-43615824	chr1	+	43614438	43615837	True	NM_001101376,NM_006824	chr1,chr1	+,-	FAM183A,EBNA1BP2	-896,22206
chr11:14912387-14912678	chr11	+	14912424	14912622	True	NM_024514,NM_000728	chr11,chr11	-,+	CYP2R1,CALCB	1179,182523
chrX:128874840-128876072	chrX	+	128875194	128875992	True	NM_017413,NM_003399	chrX,chrX	-,+	APLN,XPNPEP2	-86261,-2306
chr2:27486167-27486605	chr2	+	27486188	27486554	True	NM_173650,NM_003459	chr2,chr2	+,-	DNAJC5G,SLC30A3	11734,-228
chr7:31622594-31622959	chr7	+	31622602	31622966	True	NM_194300,NM_022728	chr7,chr7	+,-	CCDC129,NEUROD6	-65682,-242064
chr8:86867595-86868742	chr8	+	86867702	86868761	True	NR_003594	chr8	-	REXO1L2P	-27531
chr1:212185769-212186606	chr1	+	212185768	212186512	True	NM_016448,NM_001199809	chr1,chr1	+,-	DTL,INTS7	22406,22541
chr19:50192654-50192896	chr19	+	50192654	50192774	True	NM_001101340,NM_001136052,NM_001571,NM_152359,NM_001199752,NM_001199753	chr19,chr19,chr19,chr19,chr19,chr19	+,+,-,+,+,+	C19orf76,CPT1C,IRF3,CPT1C,CPT1C,CPT1C	-763,1590,-23522,1590,1590,1590
chrX:40691338-40691598	chrX	+	40691407	40691581	True	NR_027761,NM_001195522	chrX,chrX	-,+	LOC100132831,LOC347411	918,-208640
chr9:44016683-44017657	chr9	+	44016686	44017186	True	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	-385956,-331852
chr9:44016683-44017657	chr9	+	66364123	66364623	False	NR_024443,NR_024496	chr9,chr9	-,+	LOC100133920,LOC442421	666409,129645
chr1:203189679-203189981	chr1	+	203189756	203189979	True	NM_003465,NM_006763	chr1,chr1	-,+	CHIT1,BTG2	8932,84684
chr6:143934405-143935079	chr6	+	143934586	143935081	True	NM_001100166,NR_027113,NM_014721	chr6,chr6,chr6	+,-,+	PHACTR2,LOC285740,PHACTR2	-5327,-44110,-5327
chr2:223726292-223728147	chr2	+	223726695	223728182	True	NM_005687,NM_203372,NM_004457	chr2,chr2,chr2	-,+,+	FARSB,ACSL3,ACSL3	-205868,-1023,-1023
chr1:40780022-40780271	chr1	+	40780044	40780287	True	NM_005857,NM_001852	chr1,chr1	+,-	ZMPSTE24,COL9A2	-56362,2702
chr4:49303375-49304731	chr4	+	49303576	49304620	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-315364,-394761
chr4:49303375-49304731	chr4	-	49320942	49321986	False	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-332728,-412127
chr4:49303375-49304731	chr4	+	49297440	49298484	False	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-309228,-388625
chr9:40789816-40790140	chr9	+	40789988	40790182	True	NR_026801,NM_033160	chr9,chr9	+,-	FAM74A3,ZNF658	-74522,1980
chr9:40789816-40790140	chr9	+	39462398	39462592	False	NM_001040065,NR_003528	chr9,chr9	+,-	FAM75A2,LOC653501	-106757,1984
chr9:40789816-40790140	chr9	+	41607416	41607610	False	NM_001113541,NR_003528	chr9,chr9	+,-	FAM75A5,LOC653501	-106795,1984
chr9:42013776-42014868	chr9	+	42014037	42014744	True	NR_003670,NM_001012421	chr9,chr9	-,+	KGFLP2,ANKRD20A2	4893,353558
chr9:42013776-42014868	chr9	+	44397483	44397549	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	592686,-766753
chr9:42013776-42014868	chr9	+	46839092	46839450	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-3208362,-151590
chr9:42013776-42014868	chr9	-	46692297	46693004	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-3061567,-4785
chr15:67814059-67814398	chr15	+	67814272	67814444	True	NM_001143936,NM_024666	chr15,chr15	+,-	C15orf61,AAGAB	-801,-267198
chr9:91002874-91003129	chr9	+	91002880	91003060	True	NM_006717,NM_001166137	chr9,chr9	+,-	SPIN1,FAM75C2	236,-252980
chr1:24119301-24119670	chr1	+	24119317	24119649	True	NM_001008216,NM_000403,NM_001127621,NM_007260	chr1,chr1,chr1,chr1	-,-,-,+	GALE,GALE,GALE,LYPLA2	7695,7435,6461,-1722
chr2:130809598-130809937	chr2	+	130809891	130809963	True	NR_026758,NM_032144	chr2,chr2	-,+	LOC440905,RAB6C	-1187,-72707
chr2:130809598-130809937	chr2	-	132042552	132042624	False	NR_030728,NM_001077637	chr2,chr2	+,-	LOC440910,LOC150786	-5740,79157
chr6:52924174-52925306	chr6	+	52924195	52925209	True	NM_014920,NM_033481,NM_033480,NM_016513	chr6,chr6,chr6,chr6	-,+,+,-	ICK,FBXO9,FBXO9,ICK	1441,4586,5047,1441
chr11:637873-638937	chr11	+	638387	638833	True	NM_000797,NM_021920	chr11,chr11	+,-	DRD4,SCT	-1133,-11214
chr9:89646766-89647216	chr9	+	89646961	89647265	True	NR_027471,NM_001001709	chr9,chr9	-,+	LOC440173,C9orf170	9835,116293
chr17:30262166-30263513	chr17	+	30262338	30263304	True	NM_018428,NM_015355	chr17,chr17	-,+	UTP6,SUZ12	-33609,739
chr7:102312285-102312641	chr7	+	102312299	102312687	True	NM_032959,NM_001166339	chr7,chr7	-,+	POLR2J2,SPDYE2L	-117,-21578
chr7:102312285-102312641	chr7	+	44059006	44059340	False	NM_175064,NR_003655	chr7,chr7	+,-	SPDYE1,POLR2J4	-18568,-258
chr7:102312285-102312641	chr7	+	102119623	102119957	False	NM_006234,NM_152892	chr7,chr7	-,+	POLR2J,LRWD1	-242,-14284
chr7:102312285-102312641	chr7	+	102213280	102213614	False	NM_001166339,NM_001097615	chr7,chr7	+,-	SPDYE2L,POLR2J3	-21652,-212
chr22:23413795-23414111	chr22	+	23413938	23414078	True	NM_002073,NM_014433	chr22,chr22	+,-	GNAZ,RTDR1	-1320,70213
chr14:56231313-56232983	chr14	+	56231507	56233032	True	NR_026796,NR_004844	chr14,chr14	-,+	C14orf34,RPL13AP3	30410,-70
chr4:2418329-2418605	chr4	+	2418420	2418628	True	NM_001193282,NM_001172656,NM_001172657,NM_001172658,NM_020972	chr4,chr4,chr4,chr4,chr4	+,-,-,-,-	LOC402160,ZFYVE28,ZFYVE28,ZFYVE28,ZFYVE28	2072,1792,1792,1792,1792
chr2:74406659-74408200	chr2	+	74407062	74408205	True	NM_018221,NM_006636	chr2,chr2	-,+	MOBKL1B,MTHFD2	-1067,17484
chr19:17187920-17188124	chr19	+	17187924	17188166	True	NM_001130065,NM_001011699,NM_033417,NM_004145	chr19,chr19,chr19,chr19	+,-,-,+	MYO9B,HAUS8,HAUS8,MYO9B	-1384,-1581,-1581,-1384
chr17:40759678-40761302	chr17	+	40759860	40761097	True	NM_001070,NR_026697,NM_178126	chr17,chr17,chr17	+,-,-	TUBG1,FAM134C,FAM134C	260,398,398
chr21:45971726-45972196	chr21	+	45971800	45972140	True	NM_198696,NM_198687,NM_198693	chr21,chr21,chr21	-,+,-	KRTAP10-3,KRTAP10-4,KRTAP10-2	6553,21465,-412
chr21:45971726-45972196	chr21	-	46056706	46056756	False	NM_198698,NM_198690,NM_181688,NM_198692	chr21,chr21,chr21,chr21	-,+,+,+	KRTAP12-4,KRTAP10-9,KRTAP10-10,KRTAP10-11	17870,-9717,516,9574
chr19:14631659-14633151	chr19	+	14631899	14633066	True	NR_038104,NM_006145,NM_138501,NR_038103,NR_030369	chr19,chr19,chr19,chr19,chr19	+,-,+,+,+	TECR,DNAJB1,TECR,TECR,MIR639	7312,-2698,7312,7312,7288
chr16:16668192-16668964	chr16	+	16668491	16668964	True	NR_036447,NM_001079528	chr16,chr16	+,-	PKD1P1,ABCC6	-257077,-351163
chr16:16668192-16668964	chr16	-	18789994	18790427	False	NM_001019,NM_024847	chr16,chr16	-,+	RPS15A,TMC7	11279,204828
chrX:112057118-112058639	chrX	+	112057129	112058593	True	NM_001004308,NM_001113490	chrX,chrX	+,-	ZCCHC16,AMOT	-730928,7811
chr9:131941058-131941591	chr9	+	131941101	131941589	True	NM_203434,NM_001193397	chr9,chr9	-,+	IER5L,PPP2R4	-561,-67185
chr16:3073648-3074119	chr16	+	3073661	3074095	True	NM_001142350,NM_024339,NM_017885,NM_001002017,NM_001002018,NM_021195,NM_016639	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,-,-,-,-,+	THOC6,THOC6,HCFC1R1,HCFC1R1,HCFC1R1,CLDN6,TNFRSF12A	-2,-2,242,242,242,-5473,-3399
chr8:29119719-29120029	chr8	+	29119734	29119924	True	NM_015254,NM_024567	chr8,chr8	-,+	KIF13B,HMBOX1	736,-371568
chr6:69345461-69345772	chr6	+	69345607	69345671	True	NM_018368,NM_001704	chr6,chr6	-,+	LMBRD1,BAI3	1161428,-26
chr9:139293898-139294210	chr9	+	139293953	139294209	True	NM_003086,NM_015160	chr9,chr9	-,+	SNAPC4,PMPCA	-1064,10906
chr1:113161341-113161628	chr1	+	113161345	113161583	True	NM_017744,NM_138728,NM_138729,NM_006135,NM_138727	chr1,chr1,chr1,chr1,chr1	-,-,-,+,-	ST7L,ST7L,ST7L,CAPZA1,ST7L	507,507,507,491,507
chrX:8702474-8703829	chrX	+	8702698	8703832	True	NM_001001888,NM_000216	chrX,chrX	+,-	VCX3B,KAL1	-269886,-2471
chr20:2905618-2907595	chr20	+	2905617	2907355	True	NM_022760,NM_080841	chr20,chr20	-,+	FAM113A,PTPRA	-84285,-1821
chr1:160281459-160283363	chr1	+	160281636	160283115	True	NR_002190,NR_036493	chr1,chr1	+,-	SUMO1P3,PEX19	3939,-26695
chr14:75470080-75470312	chr14	+	75470096	75470348	True	NM_002632,NM_014239,NM_001040108	chr14,chr14,chr14	-,+,-	PGF,EIF2B2,MLH3	-47805,-535,47937
chrY:10029992-10031961	chrY	+	10031300	10031754	True	NR_003593,NR_003589	chrY,chrY	+,-	TTTY23B,TTTY1B	-282946,-419372
chr1:231959058-231959907	chr1	+	231959175	231959939	True	NM_018662,NR_002227	chr1,chr1	+,-	DISC1,DISC2	-196678,-4912
chr12:104683254-104684189	chr12	+	104683313	104683841	True	NM_006166,NM_003330,NM_182743,NM_182729,NM_182742	chr12,chr12,chr12,chr12,chr12	-,+,+,+,+	NFYB,TXNRD1,TXNRD1,TXNRD1,TXNRD1	-151273,-2637,-2637,-2637,-2637
chr20:38734729-38735614	chr20	+	38735051	38735647	True	NM_003286,NM_005461	chr20,chr20	+,-	TOP1,MAFB	921814,582279
chr17:40344467-40345028	chr17	+	40344487	40345053	True	NR_024573,NM_033194,NM_032484,NM_001524,NM_001142622,NM_001142623	chr17,chr17,chr17,chr17,chr17,chr17	-,+,-,-,-,-	GHDC,HSPB9,GHDC,HCRT,GHDC,GHDC	1252,-69782,1547,-7017,1547,1547
chr17:41176746-41177056	chr17	+	41176892	41177056	True	NM_005440,NM_006373	chr17,chr17	+,-	RND2,VAT1	201,-2433
chr12:58088344-58089862	chr12	+	58088394	58089812	True	NM_006812,NM_001017958,NM_001122772,NM_001017957,NM_001017956	chr12,chr12,chr12,chr12,chr12	+,+,-,+,+	OS9,OS9,AGAP2,OS9,OS9	-708,-708,42267,-708,-708
chr6:66330773-66332747	chr6	+	66331813	66332558	True	NR_026540,NM_198283	chr6,chr6	+,-	MCART3P,EYS	165213,-42116
chr15:101818006-101819805	chr15	+	101818210	101819853	True	NM_024652,NM_018445,NM_203472	chr15,chr15,chr15	+,-,-	LRRK1,SELS,SELS	-358814,-510,-510
chr6:27529229-27529671	chr6	+	27529248	27529706	True	NM_001076781,NM_007149	chr6,chr6	+,-	ZNF391,ZNF184	-172775,-88351
chr20:43730573-43730956	chr20	+	43730584	43731009	True	NM_002251,NM_002638	chr20,chr20	-,+	KCNS1,PI3	-831,72530
chr10:94966685-94967117	chr10	+	94966765	94967091	True	NM_013451,NM_000783	chr10,chr10	-,+	MYOF,CYP26A1	275033,-133169
chr1:235188304-235189077	chr1	+	235188304	235188947	True	NM_001037277,NR_002956	chr1,chr1	+,-	GGPS1,SNORA14B	302805,102356
chr15:42262354-42264195	chr15	+	42262445	42264093	True	NM_139265,NM_001114633	chr15,chr15	-,+	EHD4,PLA2G4B	712,-131485
chr1:32864236-32865356	chr1	+	32864281	32864921	True	NM_052841,NM_001143890,NM_018045,NM_001143889,NM_001143888	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	TSSK3,BSDC1,BSDC1,BSDC1,BSDC1	-36481,-4219,-4219,-4219,-4219
chr8:87243981-87244267	chr8	+	87244013	87244137	True	NM_007013,NM_138817	chr8,chr8	+,-	WWP1,SLC7A13	110856,-1409
chr22:24181131-24181762	chr22	+	24181137	24181679	True	NM_198440,NM_001002862,NM_001024938,NM_001135751	chr22,chr22,chr22,chr22	-,-,+,-	DERL3,DERL3,SLC2A11,DERL3	28,28,17379,28
chr1:151435524-151436996	chr1	+	151435656	151436842	True	NM_001194937,NM_020770,NM_015100,NM_001194938,NM_145796	chr1,chr1,chr1,chr1,chr1	-,+,-,-,-	POGZ,CGN,POGZ,POGZ,POGZ	-3715,47019,-3715,-3715,-3715
chr7:100198801-100199542	chr7	+	100198862	100199284	True	NM_002319,NM_002593	chr7,chr7	-,+	LRCH4,PCOLCE	-15086,597
chr11:111379707-111380727	chr11	+	111379706	111380614	True	NR_029840,NM_001100388,NR_029839,NM_207430,NM_017589	chr11,chr11,chr11,chr11,chr11	+,+,+,+,-	MIR34C,C11orf88,MIR34B,C11orf88,BTG4	3549,4895,3048,4895,2510
chr16:54320272-54320523	chr16	+	54320319	54320573	True	NM_001080432,NM_024336	chr16,chr16	+,-	FTO,IRX3	-582495,-43
chr15:40857525-40857861	chr15	+	40857529	40857807	True	NM_052849,NM_001080792,NM_001080791,NM_152260	chr15,chr15,chr15,chr15	-,-,-,+	C15orf57,C15orf57,C15orf57,RPUSD2	-277,-277,-277,3729
chr11:1860397-1861356	chr11	+	1860428	1861182	True	NM_001145829,NR_036185,NM_138567,NM_001145841,NM_003282	chr11,chr11,chr11,chr11,chr11	+,-,+,+,+	TNNI2,MIR4298,SYT8,TNNI2,TNNI2	-4,19634,-4805,249,-246
chr17:58046506-58047337	chr17	+	58046653	58047102	True	NM_003161,NM_016125	chr17,chr17	+,-	RPS6KB1,RNFT1	-76272,-4536
chr20:23399556-23400816	chr20	+	23399855	23400713	True	NM_138283,NM_022080	chr20,chr20	+,-	CSTL1,NAPB	19608,1504
chr19:54960404-54960647	chr19	+	54960408	54960616	True	NM_198988,NM_052925	chr19,chr19	-,+	LENG9,LENG8	14328,-394
chr11:791873-792095	chr11	+	791942	792108	True	NM_001004,NM_001191060,NM_024698,NM_001191061,NM_016564	chr11,chr11,chr11,chr11,chr11	+,-,-,-,-	RPLP2,SLC25A22,SLC25A22,SLC25A22,CEND1	17827,5937,4205,6211,-1816
chr17:80410806-80411637	chr17	+	80411001	80411068	True	NM_012336,NM_001193655,NM_001193654,NM_001193657,NM_031968,NM_001193653,NM_001083608,NM_001033046,NM_001100408,NR_036514,NR_036517,NR_036516,NR_036519,NR_036518,NM_001038618,NM_001100407	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,-,+,-,+,-,-,-,-,-,-,-,+,-	NARF,C17orf62,C17orf62,C17orf62,NARF,C17orf62,NARF,C17orf62,C17orf62,C17orf62,C17orf62,C17orf62,C17orf62,C17orf62,NARF,C17orf62	5471,-3399,-2294,-2294,5471,-2294,5471,-2294,-2294,-2294,-2294,-2294,-2294,-2294,4991,-2294
chr8:80992572-80993477	chr8	+	80992571	80993504	True	NM_001025252,NM_001105539	chr8,chr8	-,+	TPD52,ZBTB10	87,404943
chr9:28705208-28705569	chr9	+	28705208	28705608	True	NM_152570,NM_020124	chr9,chr9	-,+	LINGO2,IFNK	13747,-1180952
chr17:46658088-46659010	chr17	+	46658151	46658995	True	NM_024015,NR_033202,NR_029608,NM_002146,NR_033201	chr17,chr17,chr17,chr17,chr17	-,+,-,-,+	HOXB4,LOC404266,MIR10A,HOXB3,LOC404266	-2408,8846,-842,-6341,8827
chr12:50419473-50419967	chr12	+	50419490	50420005	True	NM_001126103,NM_001126104,NM_001095,NM_013277	chr12,chr12,chr12,chr12	-,-,+,-	RACGAP1,RACGAP1,ACCN2,RACGAP1	-183,-183,31481,-183
chr10:101970137-101971933	chr10	+	101970171	101971322	True	NM_005063,NM_001278	chr10,chr10	+,-	SCD,CHUK	135449,18084
chr14:21161854-21162751	chr14	+	21161923	21162796	True	NM_001097577,NM_002937,NM_001145,NM_194431,NM_001001968	chr14,chr14,chr14,chr14,chr14	+,+,+,+,-	ANG,RNASE4,ANG,RNASE4,OR6S1	-5043,-9603,-9639,-5043,-52073
chr6:152130672-152131493	chr6	+	152130678	152131363	True	NM_017909,NM_000125,NM_001122741,NM_001122740	chr6,chr6,chr6,chr6	-,+,+,+	RMND1,ESR1,ESR1,ESR1	-357362,-1915,-3921,-2275
chr8:105540446-105540722	chr8	+	105540482	105540707	True	NM_001135703,NM_030788	chr8,chr8	-,+	LRP12,TM7SF4	60606,-188481
chr5:67584448-67585552	chr5	+	67584547	67585577	True	NM_181524,NM_181504,NM_176816	chr5,chr5,chr5	+,+,-	PIK3R1,PIK3R1,CCDC125	-352,917,1030891
chr1:70879708-70880117	chr1	+	70879722	70879924	True	NM_001190463,NM_153742,NM_030816,NM_001902	chr1,chr1,chr1,chr1	+,+,-,+	CTH,CTH,ANKRD13C,CTH	-2875,-2875,-59305,-2875
chr17:67074498-67076097	chr17	+	67074716	67076151	True	NM_080283,NM_002758	chr17,chr17	-,+	ABCA9,MAP2K6	-17580,334686
chr11:57368593-57369882	chr11	+	57368927	57369875	True	NM_001032295,NM_000062,NM_198183	chr11,chr11,chr11	+,+,-	SERPING1,SERPING1,UBE2L6	-3276,-3954,-33474
chr10:115327196-115327704	chr10	+	115327239	115327548	True	NM_006175,NM_004132	chr10,chr10	-,+	NRAP,HABP2	96310,-14513
chr14:20922931-20923426	chr14	+	20923049	20923359	True	NM_001641,NM_017807,NM_001100814,NM_080649,NM_080648,NM_144568	chr14,chr14,chr14,chr14,chr14,chr14	+,-,-,+,+,-	APEX1,OSGEP,TMEM55B,APEX1,APEX1,TMEM55B	-26,2,6328,-26,-26,6328
chr2:219848615-219848844	chr2	+	219848623	219848861	True	NR_015390,NM_057093,NM_057094,NM_017521,NR_024385,NM_005209	chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,+,-	LOC151300,CRYBA2,CRYBA2,FEV,LOC151300,CRYBA2	-7668,9316,9316,1568,-7668,9310
chr1:12080056-12080726	chr1	+	12080061	12080562	True	NM_021933,NM_138346	chr1,chr1	+,-	MIIP,KIAA2013	-600,-93576
chr15:41837497-41838489	chr15	+	41837500	41837743	True	NM_015540,NM_006293	chr15,chr15	-,+	RPAP1,TYRO3	-1036,13476
chr19:44457209-44458600	chr19	+	44457703	44458633	True	NM_003425,NM_013359	chr19,chr19	-,+	ZNF45,ZNF221	-18292,-2357
chr3:154021157-154021595	chr3	+	154021157	154021627	True	NM_015595,NM_001114397	chr3,chr3	+,-	ARHGEF26,DHX36	-182064,20715
chr16:8351483-8352740	chr16	+	8351498	8352657	True	NM_001146336,NM_024109	chr16,chr16	-,+	TMEM114,METTL22	269626,362869
chr3:155854111-155855638	chr3	+	155854287	155855285	True	NM_003471,NM_004733	chr3,chr3	+,-	KCNAB1,SLC33A1	5465,-282039
chr9:2280179-2281231	chr9	+	2280629	2281264	True	NM_139045,NR_015375	chr9,chr9	+,-	SMARCA2,FLJ35024	-265338,341159
chr11:33287552-33288817	chr11	+	33287645	33288647	True	NM_001033506,NM_001048200,NM_005734	chr11,chr11,chr11	-,+,+	CSTF3,HIPK3,HIPK3	-104608,-8534,-8534
chr10:45458776-45459466	chr10	+	45458941	45459435	True	NR_033842,NM_032023	chr10,chr10	-,+	LOC220980,RASSF4	-3804,-3773
chr9:89560936-89561184	chr9	+	89560979	89561161	True	NM_002048,NM_001001709	chr9,chr9	-,+	GAS1,C9orf170	993,202397
chrX:153768228-153769390	chrX	+	153768227	153769405	True	NM_003639,NM_001099856,NM_001099857,NM_001042351,NM_000402,NM_001145255	chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,-,-,+	IKBKG,IKBKG,IKBKG,G6PD,G6PD,IKBKG	6656,1053,6156,6432,5878,6156
chr19:52004792-52005151	chr19	+	52004791	52005091	True	NM_053003,NM_033329,NM_001080405	chr19,chr19,chr19	-,-,+	SIGLEC12,SIGLEC12,CEACAM18	2,-1144,-25004
chr17:13925887-13926313	chr17	+	13925909	13926355	True	NR_003261,NM_001007530	chr17,chr17	+,-	CDRT15P,CDRT15	1459,213845
chr17:13925887-13926313	chr17	-	14141851	14142065	False	NM_001007530,NM_006041	chr17,chr17	-,+	CDRT15,HS3ST3B1	-1701,62440
chr17:61950730-61951040	chr17	+	61950818	61951084	True	NM_020991,NM_022645,NM_022644,NM_022557,NM_022556,NR_002947,NM_002059,NM_022558	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,+,-,-	CSH2,CSH2,CSH2,GH2,GH2,TCAM1P,GH2,GH2	55,55,55,8189,8189,-16494,8189,8189
chr17:61950730-61951040	chr17	+	61973715	61973981	False	NM_022641,NM_022640,NR_002947,NM_001317	chr17,chr17,chr17,chr17	-,-,+,-	CSH1,CSH1,TCAM1P,CSH1	90,90,-39391,90
chr1:153627855-153628451	chr1	+	153627875	153628231	True	NM_012437,NM_004515	chr1,chr1	+,-	SNAPIN,ILF2	2913,15302
chr8:65492419-65492963	chr8	+	65492596	65493000	True	NM_152414,NR_015374	chr8,chr8	+,-	BHLHE22,LOC401463	-36,-2776
chr4:38774334-38775636	chr4	+	38774561	38775676	True	NM_001017388,NM_001195107,NM_138389,NM_001195108,NM_030956,NM_001195106	chr4,chr4,chr4,chr4,chr4,chr4	-,-,+,-,-,-	TLR10,TLR10,FAM114A1,TLR10,TLR10,TLR10	8988,8988,93677,8988,8988,8988
chr21:46356772-46358104	chr21	+	46356778	46357867	True	NM_058190,NR_027128,NR_027129,NM_001127491	chr21,chr21,chr21,chr21	+,-,-,-	C21orf70,C21orf67,C21orf67,ITGB2	2087,2011,2011,-8025
chr8:95832696-95833745	chr8	+	95833251	95833690	True	NM_017864,NM_057749	chr8,chr8	+,-	INTS8,CCNE2	1843,73842
chr15:91474558-91475001	chr15	+	91474607	91474999	True	NM_018671,NM_198527,NM_001039675	chr15,chr15,chr15	+,-,+	UNC45A,HDDC3,UNC45A	3215,825,-1248
chr1:182772023-182773354	chr1	+	182772102	182773247	True	NM_033345,NM_030769	chr1,chr1	-,+	RGS8,NPL	-130035,-13577
chr14:64685206-64686535	chr14	+	64685283	64686513	True	NM_182910,NM_182913,NM_001040275	chr14,chr14,chr14	+,+,-	SYNE2,SYNE2,ESR2	-2670,-4483,74665
chr5:6371824-6372639	chr5	+	6371829	6372637	True	NM_001145161,NM_032286	chr5,chr5	+,-	UBE2QL1,MED10	76098,6052
chr17:80011614-80012185	chr17	+	80011744	80011916	True	NM_004127,NM_002917,NM_212492	chr17,chr17,chr17	+,-,+	GPS1,RFNG,GPS1	-2032,-2094,-2032
chr12:57881052-57881351	chr12	+	57881085	57881327	True	NM_032496,NM_004990,NM_001080157,NM_001080156	chr12,chr12,chr12,chr12	-,+,-,-	ARHGAP9,MARS,ARHGAP9,ARHGAP9	-7452,408,-7661,-9357
chr16:31227253-31227617	chr16	+	31227279	31227613	True	NM_001008274,NM_152901	chr16,chr16	+,-	TRIM72,PYDC1	-1995,832
chr1:150982019-150982651	chr1	+	150982028	150982535	True	NM_001040217,NM_021222,NM_001163258,NM_001163259,NM_018379,NM_001163260	chr1,chr1,chr1,chr1,chr1,chr1	-,+,-,-,-,-	FAM63A,PRUNE,FAM63A,FAM63A,FAM63A,FAM63A	-2643,-1107,-1174,-2755,-1174,-2755
chr4:183740079-183740299	chr4	+	183740082	183740238	True	NR_003612,NM_001012732	chr4,chr4	+,-	FAM92A3,DCTD	218579,98442
chr2:166099832-166100650	chr2	+	166100124	166100510	True	NM_001040142,NM_006922	chr2,chr2	+,-	SCN2A,SCN3A	-4264,-39547
chr7:100824306-100824549	chr7	+	100824329	100824415	True	NM_198571,NM_001283	chr7,chr7	-,+	C7orf52,AP1S1	-772,-26694
chr1:36929413-36929797	chr1	+	36929441	36929737	True	NM_024676,NM_031280	chr1,chr1	+,-	SH3D21,MRPS15	-156784,353
chr1:16485152-16485983	chr1	+	16485366	16485848	True	NM_001165945,NM_004431	chr1,chr1	+,-	CLCNKB,EPHA2	-110133,-2784
chr14:52337434-52338734	chr14	+	52337436	52338558	True	NM_007361,NM_053064	chr14,chr14	-,+	NID2,GNG2	197445,-10437
chr16:69346703-69348027	chr16	+	69346825	69347773	True	NM_022341,NM_013245	chr16,chr16	-,+	PDF,VPS4A	16775,-1594
chr1:99728824-99729433	chr1	+	99728825	99729469	True	NM_014839,NM_001037317,NM_001166252	chr1,chr1,chr1	+,-,+	LPPR4,LPPR5,LPPR4	378,-258376,378
chr3:179043591-179043838	chr3	+	179043696	179043840	True	NM_016331,NM_171828	chr3,chr3	+,-	ZNF639,KCNMB3	-2209,-58858
chr8:126010709-126011119	chr8	+	126010991	126011107	True	NM_003129,NM_014846	chr8,chr8	+,-	SQLE,KIAA0196	-322,93004
chr1:234615368-234617176	chr1	+	234615664	234617181	True	NM_001012985,NM_005646	chr1,chr1	+,-	C1orf31,TARBP1	-106287,-815
chr9:33747905-33748715	chr9	+	33748152	33748700	True	NM_001197097,NR_023917,NM_007343,NM_001197098	chr9,chr9,chr9,chr9	+,-,+,+	PRSS3,PTENP1,PRSS3,PRSS3	1763,-70734,1763,2118
chr2:201677343-201678218	chr2	+	201677564	201678254	True	NM_001162407,NM_014670	chr2,chr2	-,+	CLK1,BZW1	51086,-968
chr19:39108031-39108493	chr19	+	39108031	39108415	True	NM_013234,NM_007181,NM_001042600	chr19,chr19,chr19	+,-,-	EIF3K,MAP4K1,MAP4K1	1306,278,278
chr21:34961325-34961615	chr21	+	34961353	34961607	True	NM_138927,NM_017613	chr21,chr21	+,-	SON,DONSON	-46054,-339
chr20:62340227-62340843	chr20	+	62340361	62340679	True	NM_032527,NM_003224,NM_001195653,NM_001195654,NM_181485,NM_001083113,NM_001134758	chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,-,+,+,+,+,-	ZGPAT,ARFRP1,ZGPAT,ZGPAT,ZGPAT,ZGPAT,ARFRP1	-1032,-1006,-1032,-1032,-1032,-1618,-1006
chr16:85723755-85724293	chr16	+	85723815	85724325	True	NM_014615,NM_016095	chr16,chr16	+,-	KIAA0182,GINS2	-76942,-1227
chr3:187559205-187559848	chr3	+	187559395	187559893	True	NR_034062,NM_001706	chr3,chr3	+,-	LOC100131635,BCL6	-139292,-95882
chr1:77684372-77684955	chr1	+	77684389	77684853	True	NM_174858,NM_005482	chr1,chr1	+,-	AK5,PIGK	62808,329
chrX:151938307-151939155	chrX	+	151938715	151939167	True	NM_001129826,NM_005362	chrX,chrX	+,-	CSAG3,MAGEA3	-10955,-475
chrX:151938307-151939155	chrX	-	151866302	151866754	False	NM_001129826,NM_005363,NM_175868	chrX,chrX,chrX	-,+,+	CSAG3,MAGEA6,MAGEA6	10966,490,490
chr1:224548863-224549873	chr1	+	224549579	224549789	True	NM_014184,NM_206840	chr1,chr1	+,-	CNIH4,NVL	-5038,-31707
chr3:50653775-50654313	chr3	+	50653790	50654346	True	NM_013324,NM_145071,NM_004635	chr3,chr3,chr3	-,-,+	CISH,CISH,MAPKAPK3	-4528,-4528,254
chr4:178227620-178227866	chr4	+	178227810	178227874	True	NM_000027,NM_018248	chr4,chr4	-,+	AGA,NEIL3	135833,3116
chr15:74986940-74988165	chr15	+	74987234	74987844	True	NM_001142443,NM_000761,NM_025083,NM_001142444	chr15,chr15,chr15,chr15	-,+,-,-	EDC3,CYP1A2,EDC3,EDC3	592,53339,592,592
chr15:40226605-40227053	chr15	+	40226646	40227088	True	NM_007223,NM_001013703	chr15,chr15	-,+	GPR176,EIF2AK4	-13553,-350
chr2:101997125-101997633	chr2	+	101997444	101997618	True	NM_017546,NM_153836	chr2,chr2	+,-	C2orf29,CREG2	-128150,6397
chr18:3453538-3453889	chr18	+	3453702	3453930	True	NM_019856,NM_173211,NM_173210,NM_003244,NM_170695,NM_173208,NM_173209,NM_173207	chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18	-,+,+,+,+,+,+,+	MYOM1,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1	-233596,19,-2162,-3581,-2162,-3722,-3780,-6145
chr19:12862800-12863293	chr19	+	12862886	12863282	True	NM_024038,NM_017682	chr19,chr19	-,+	C19orf43,BEST2	-17357,124
chr2:172273437-172274423	chr2	+	172273533	172274209	True	NM_024770,NM_001164821	chr2,chr2	-,+	METTL8,DCAF17	17167,16551
chr14:55906503-55907065	chr14	+	55906844	55907034	True	NM_004986,NM_199047	chr14,chr14	+,-	KTN1,TBPL2	139890,279
chr1:211847720-211848615	chr1	+	211847721	211848484	True	NR_026761,NM_002497,NM_001204182,NM_001204183	chr1,chr1,chr1,chr1	+,-,-,-	C1orf97,NEK2,NEK2,NEK2	-291680,538,538,538
chr6:130004509-130006172	chr6	+	130004958	130006211	True	NM_001007102,NM_033515	chr6,chr6	+,-	L3MBTL3,ARHGAP18	333516,25209
chrY:14441624-14442865	chrY	+	14442169	14442881	True	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	331416,90558
chr5:125703736-125704210	chr5	+	125703736	125704218	True	NM_001146319,NM_001182	chr5,chr5	+,-	GRAMD3,ALDH7A1	-8005,226914
chr10:120823317-120824310	chr10	+	120823597	120824019	True	NR_002917,NM_199461	chr10,chr10	-,+	SNORA19,NANOS1	-3947,-34426
chr12:110560953-110561968	chr12	+	110561012	110561914	True	NM_207435,NM_031473,NM_001143779,NM_014055	chr12,chr12,chr12,chr12	-,+,+,+	C12orf76,IFT81,IFT81,IFT81	-55512,225,225,225
chr16:224240-224444	chr16	+	224264	224444	True	NM_001077350,NM_000558,NM_000517,NM_001003938,NM_005331	chr16,chr16,chr16,chr16,chr16	-,+,+,+,+	NPRL3,HBA1,HBA2,HBM,HBQ1	-35592,2234,-1469,-8342,5888
chr16:224240-224444	chr16	+	220007	220188	False	NM_000558,NM_000517,NM_001003938,NM_001077350	chr16,chr16,chr16,chr16	+,+,+,-	HBA1,HBA2,HBM,NPRL3	6490,2657,-4085,-31335
chr16:30021472-30021694	chr16	+	30021475	30021707	True	NM_003586,NM_001109659	chr16,chr16	-,+	DOC2A,C16orf92	744,12947
chr16:67198372-67198601	chr16	+	67198372	67198560	True	NM_001185058,NM_003946,NM_001040667,NM_001538,NM_003789,NM_018378,NM_001185057	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,-,+,+	NOL3,NOL3,HSF4,HSF4,TRADD,FBXL8,NOL3	5844,9195,-1135,-1135,-4560,-4532,9204
chr16:2018670-2018944	chr16	+	2018732	2018944	True	NR_003142,NM_174903,NM_002952,NR_002327,NR_002326,NM_006453,NR_003020,NM_004548	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,-,-,-,+,+,+	SNHG9,RNF151,RPS2,SNORA10,SNORA64,TBL3,SNORA78,NDUFB10	-3786,-1908,-3905,-6265,-5625,3119,-3598,-9266
chr2:97005867-97006219	chr2	+	97005929	97006122	True	NM_014014,NM_015341	chr2,chr2	-,+	SNRNP200,NCAPH	-34622,-4504
chr2:234297686-234298405	chr2	+	234297892	234298371	True	NM_003648,NM_018218	chr2,chr2	+,-	DGKD,USP40	-1143,175916
chr3:5227730-5228957	chr3	+	5228096	5228898	True	NM_014674,NR_037903	chr3,chr3	+,-	EDEM1,LOC100507582	460,-279910
chr17:26665543-26667023	chr17	+	26665590	26666894	True	NM_174887,NM_021137	chr17,chr17	-,+	IFT20,TNFAIP1	-3095,-3093
chr17:46018652-46018950	chr17	+	46018697	46018933	True	NM_024320,NM_018129	chr17,chr17	-,+	PRR15L,PNPO	16227,25
chr3:48885660-48887457	chr3	+	48885827	48886685	True	NM_006321,NM_004157	chr3,chr3	+,-	ARIH2,PRKAR2A	69595,-557
chr19:45443950-45444971	chr19	+	45444229	45444873	True	NM_001646,NM_145288,NR_037932,NM_000483	chr19,chr19,chr19,chr19	+,-,+,+	APOC4,ZNF296,APOC4-APOC2,APOC2	621,134865,621,4365
chr18:47808275-47808846	chr18	+	47808547	47808861	True	NM_001101654,NM_001204143,NM_001204139,NM_015844,NM_015847,NM_015846,NM_001204140,NM_001204141,NM_001204142,NM_001204136,NM_001204151,NM_001039535,NM_015845,NM_002384,NM_014593,NM_001204137,NM_001204138	chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18	-,-,-,-,-,-,-,-,-,-,-,+,-,-,-,-,-	CXXC1,MBD1,MBD1,MBD1,MBD1,MBD1,MBD1,MBD1,MBD1,MBD1,MBD1,SKA1,MBD1,MBD1,CXXC1,MBD1,MBD1	5881,-410,-403,-403,-403,-403,-403,-403,-403,-403,-2160,92530,-403,-403,5881,-403,-403
chr16:30197410-30197664	chr16	+	30197557	30197695	True	NR_037608,NR_037609,NM_001014999,NM_007074,NM_001015000,NM_024044,NM_001031827,NR_002454,NM_001039182,NM_178044,NM_001193333	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,+,-,+,-,+,+	SLX1A-SULT1A3,SLX1B-SULT1A4,SLX1A,CORO1A,SLX1A,SLX1B,BOLA2,LOC606724,BOLA2B,SLX1B,CORO1A	8058,8058,7468,-2877,7468,7468,7982,2309,7982,7468,-2877
chr1:13453620-13455235	chr1	+	13453806	13455248	True	NM_001099854,NM_001024661,NM_001010890	chr1,chr1,chr1	-,-,+	PRAMEF14,PRAMEF13,PRAMEF9	-1150,-1150,-32681
chr1:13453620-13455235	chr1	-	12849928	12850213	False	NM_023013,NM_001146344	chr1,chr1	+,-	PRAMEF1,PRAMEF11	1332,41104
chr1:13453620-13455235	chr1	+	13674661	13676084	False	NM_001099854,NM_001010890	chr1,chr1	-,+	PRAMEF14,PRAMEF9	-1150,-32739
chr2:231730786-231731129	chr2	+	231730837	231731177	True	NM_001012516,NM_030926,NM_001012514,NM_005683	chr2,chr2,chr2,chr2	+,+,+,-	ITM2C,ITM2C,ITM2C,GPR55	-1267,-1267,-1267,58814
chr17:79141065-79141315	chr17	+	79141092	79141304	True	NR_027255,NM_001080395	chr17,chr17	+,-	LOC388428,AATK	-1836,-1220
chr10:73636258-73636732	chr10	+	73636515	73636595	True	NM_001171936,NM_002778	chr10,chr10	+,-	CDH23,PSAP	-64940,-25433
chr11:64878289-64878673	chr11	+	64878378	64878672	True	NM_014205,NM_003273	chr11,chr11	-,+	ZNHIT2,TM7SF2	6548,668
chr19:43269845-43271056	chr19	+	43270109	43271029	True	NM_001130168,NR_036584,NM_182707,NM_001130167	chr19,chr19,chr19,chr19	-,+,-,-	PSG8,LOC100289650,PSG8,PSG8	-278,54985,-278,-278
chr18:40695497-40696073	chr18	+	40695512	40695982	True	NM_002647,NM_002930	chr18,chr18	+,-	PIK3C3,RIT2	-1160364,27
chr5:86343093-86343465	chr5	+	86343423	86343515	True	NR_036243,NM_002890	chr5,chr5	-,+	MIR4280,RASA1	67308,220635
chr19:36604514-36604813	chr19	+	36604591	36604855	True	NM_006233,NM_001281	chr19,chr19	-,+	POLR2I,TBCB	1401,1032
chr2:163143477-163144832	chr2	+	163143533	163144741	True	NM_022168,NM_012198	chr2,chr2	-,+	IFIH1,GCA	30350,55841
chr1:57432414-57434083	chr1	+	57432628	57434007	True	NM_000562,NM_000066	chr1,chr1	+,-	C8A,C8B	-112243,-940
chr17:26804505-26804998	chr17	+	26804533	26804796	True	NM_080669,NM_003984,NM_001145976,NM_001145975,NR_027384	chr17,chr17,chr17,chr17,chr17	-,+,+,+,+	SLC46A1,SLC13A2,SLC13A2,SLC13A2,SLC13A2	-71305,-3920,-3920,-3920,-3920
chr17:27045506-27045880	chr17	+	27045730	27045914	True	NR_024575,NR_024579,NM_000984,NR_000014,NM_178170,NM_031934,NM_001142624,NR_000013,NR_000009,NR_000010,NM_138463,NM_001142625,NM_152465,NM_001160407,NM_001144943,NM_001144942	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,+,+,-,-,+,+,+,-,-,-,-,-,-	RAB34,RAB34,RPL23A,SNORD42A,NEK8,RAB34,RAB34,SNORD42B,SNORD4B,SNORD4A,TLCD1,RAB34,PROCA1,TLCD1,RAB34,RAB34	-479,-479,1085,4532,9917,-822,-444,1653,4784,3685,7372,-444,-6858,8091,-444,-822
chr11:125709700-125711699	chr11	+	125709893	125711414	True	NM_001144874,NM_031307,NM_212555	chr11,chr11,chr11	+,-,-	PATE4,PUS3,PATE2	-6740,61763,-61179
chr9:4679788-4680018	chr9	+	4679952	4680014	True	NM_017913,NM_001039395	chr9,chr9	+,-	CDC37L1,C9orf68	-437,-13278
chr5:55005819-55006121	chr5	+	55005973	55006034	True	NM_173514,NM_001166533	chr5,chr5	-,+	SLC38A9,DDX4	2180,27810
chr21:43785582-43786117	chr21	+	43785658	43785984	True	NM_003225,NM_001001895	chr21,chr21	-,+	TFF1,UBASH3A	710,38034
chr22:41957837-41958191	chr22	+	41957850	41958106	True	NM_001018052,NM_014460	chr22,chr22	-,+	POLR3H,CSDC2	-17371,-887
chr3:167168202-167168465	chr3	+	167168218	167168487	True	NM_006217,NM_001122752	chr3,chr3	-,+	SERPINI2,SERPINI1	23382,284944
chr15:84883745-84883955	chr15	+	84883922	84884004	True	NR_027001,NR_033738	chr15,chr15	-,+	LOC388152,LOC440300	14966,-23373
chr15:84883745-84883955	chr15	+	85763029	85763111	False	NM_006738,NM_014300	chr15,chr15	+,-	AKAP13,SEC11A	160759,-503355
chr15:84883745-84883955	chr15	+	82779939	82780021	False	NR_026811,NR_033579	chr15,chr15	-,+	LOC80154,LOC440297	18352,-26543
chr15:84883745-84883955	chr15	+	83156531	83156613	False	NR_026811,NR_033579	chr15,chr15	-,+	LOC80154,LOC440297	26338,-26549
chr9:99416415-99417165	chr9	+	99416453	99417054	True	NR_026792,NM_153698	chr9,chr9	+,-	LOC441455,C9orf21	71048,596
chr5:26998673-26999073	chr5	+	26998891	26999079	True	NR_033961,NM_016279	chr5,chr5	+,-	LOC729862,CDH9	1927897,39664
chr10:112669245-112670506	chr10	+	112669333	112670512	True	NM_007373,NM_001195305,NM_001195304,NM_001195307,NM_001195306,NR_024141	chr10,chr10,chr10,chr10,chr10,chr10	+,-,-,-,-,-	SHOC2,BBIP1,BBIP1,BBIP1,BBIP1,BBIP1	8788,8675,8675,8675,8245,8675
chr16:64277582-64278289	chr16	+	64277701	64277950	True	NM_001795,NM_001797	chr16,chr16	+,-	CDH5,CDH11	2122574,878028
chr6:39897399-39898285	chr6	+	39897765	39898330	True	NM_001075098,NR_033233,NM_005943,NM_015345	chr6,chr6,chr6,chr6	-,-,-,+	MOCS1,MOCS1,MOCS1,DAAM2	4015,4015,-2310,-137043
chr9:115983861-115984106	chr9	+	115983900	115984092	True	NM_015258,NM_001859	chr9,chr9	-,+	FKBP15,SLC31A1	-259,-143
chr9:95146701-95148006	chr9	+	95146867	95148039	True	NM_001012267,NM_014057	chr9,chr9	+,-	CENPP,OGN	-59190,18948
chr1:78147506-78147931	chr1	+	78147636	78147957	True	NM_015534,NM_198549	chr1,chr1	-,+	ZZZ3,FAM73A	439,97351
chr10:75569738-75570694	chr10	+	75569747	75570667	True	NM_015037,NM_003635	chr10,chr10	+,-	KIAA0913,NDST2	-24202,972
chr22:32759691-32760540	chr22	+	32759813	32760509	True	NM_006604,NR_002596,NR_001450,NM_001098535	chr22,chr22,chr22,chr22	+,-,-,+	RFPL3,RFPL3S,RFPL3S,RFPL3	-8992,6604,6513,-6010
chr3:66270948-66271179	chr3	+	66271061	66271203	True	NR_028475,NM_001164796,NM_004742	chr3,chr3,chr3	+,+,-	SLC25A26,SLC25A26,MAGI1	-36,-36,-246552
chr2:190429420-190429896	chr2	+	190429591	190429933	True	NM_019048,NM_014585	chr2,chr2	+,-	ASNSD1,SLC40A1	96191,15654
chr10:50602931-50603192	chr10	+	50603005	50603199	True	NM_001080520,NM_199459	chr10,chr10	-,+	DRGX,C10orf71	-3098,-95869
chr18:13732303-13732835	chr18	+	13732539	13732731	True	NM_003799,NM_152352,NM_001098801	chr18,chr18,chr18	+,-,-	RNMT,C18orf19,C18orf19	-5893,-5948,-5948
chr3:46756421-46757075	chr3	+	46756433	46757115	True	NM_013270,NM_147196	chr3,chr3	-,+	PRSS50,TMIE	2308,-13661
chr9:130343391-130343860	chr9	+	130343470	130343670	True	NM_001032221,NM_001035534	chr9,chr9	+,-	STXBP1,FAM129B	30815,-2202
chr17:66017781-66018656	chr17	+	66018057	66018533	True	NM_002266,NM_181656	chr17,chr17	+,-	KPNA2,C17orf58	13314,-28292
chr16:68118757-68118980	chr16	+	68118840	68118988	True	NM_004555,NM_173165,NM_173163,NM_018380	chr16,chr16,chr16,chr16	+,+,+,-	NFATC3,NFATC3,NFATC3,DDX28	280,280,280,-61070
chr1:148931173-148931490	chr1	+	148931470	148931538	True	NR_027355,NR_027354,NM_001024599,NR_027356	chr1,chr1,chr1,chr1	+,+,-,+	LOC645166,LOC645166,HIST2H2BF,LOC645166	-3235,-1116,467741,-3235
chr19:29391453-29391902	chr19	+	29391460	29391801	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	64236,312386
chr17:7166827-7167987	chr17	+	7166880	7168000	True	NM_001307,NM_203414,NM_001185023,NM_001185022	chr17,chr17,chr17,chr17	-,+,-,-	CLDN7,C17orf81,CLDN7,CLDN7	-616,-11380,-616,-368
chr14:96176735-96177516	chr14	+	96176747	96177500	True	NM_001098725,NM_004918,NM_021966	chr14,chr14,chr14	-,+,-	TCL1A,TCL1B,TCL1A	3098,-24044,3098
chr21:27105148-27105664	chr21	+	27105323	27105567	True	NM_001003701,NM_002040,NM_001003703,NM_001003697,NM_001003696,NM_001197297,NM_001685	chr21,chr21,chr21,chr21,chr21,chr21,chr21	-,+,-,-,-,+,-	ATP5J,GABPA,ATP5J,ATP5J,ATP5J,GABPA,ATP5J	2448,1761,2448,2448,2448,1690,2448
chr9:100158864-100159478	chr9	+	100158884	100159502	True	NR_026847,NM_014290	chr9,chr9	-,+	LOC286359,TDRD7	-49,14799
chr22:44255262-44255882	chr22	+	44255372	44255926	True	NM_025225,NM_014351	chr22,chr22	+,-	PNPLA3,SULT4A1	63692,2502
chr2:84684120-84686043	chr2	+	84684619	84685755	True	NM_003849,NM_001370	chr2,chr2	-,+	SUCLG1,DNAH6	881,57823
chr3:32991483-32993097	chr3	+	32991660	32993077	True	NM_001039770,NM_005508	chr3,chr3	-,+	TMPPE,CCR4	145266,-12
chr6:166799924-166800748	chr6	+	166799978	166800551	True	NM_016098,NR_027284	chr6,chr6	-,+	BRP44L,LOC441177	-3492,-398990
chr5:145825688-145826021	chr5	+	145825697	145826055	True	NM_006706,NM_001040006,NM_194251	chr5,chr5,chr5	+,+,-	TCERG1,TCERG1,GPR151	817,817,69675
chr3:49763457-49764653	chr3	+	49763469	49764593	True	NM_013334,NM_198722,NM_021971,NM_022064	chr3,chr3,chr3,chr3	-,-,-,+	GMPPB,AMIGO3,GMPPB,RNF123	-2085,-6231,-2085,-36530
chr5:77062614-77064173	chr5	+	77062672	77063648	True	NM_003719,NM_004607	chr5,chr5	+,-	PDE8B,TBCA	-556022,8597
chr12:4134104-4134365	chr12	+	4134175	4134335	True	NM_001759,NM_020367	chr12,chr12	+,-	CCND2,PARP11	248566,-151567
chr19:51981376-51981796	chr19	+	51981495	51981723	True	NM_001080405,NM_014442	chr19,chr19	+,-	CEACAM18,SIGLEC8	-1715,-19787
chr5:153786505-153787760	chr5	+	153786575	153787743	True	NR_037897,NM_001131062	chr5,chr5	-,+	FLJ38109,SAP30L	37689,37773
chr9:130694019-130694629	chr9	+	130694019	130694089	True	NM_001135219,NM_001018078,NM_173492,NM_003863	chr9,chr9,chr9,chr9	-,+,-,-	PIP5KL1,FPGS,PIP5KL1,DPM2	-943,-128562,-4249,6724
chr5:112197097-112197862	chr5	+	112197308	112197723	True	NM_001204199,NM_001204196,NM_001204194,NM_001204193,NM_005669,NM_003135	chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,-,+	SRP19,SRP19,SRP19,SRP19,REEP5,SRP19	-474,-474,-474,-474,60358,-474
chr18:71813126-71814605	chr18	+	71813379	71814627	True	NM_014177,NM_152676,NM_001142958	chr18,chr18,chr18	+,-,-	C18orf55,FBXO15,FBXO15	1118,422,523
chr5:22796922-22798456	chr5	+	22797048	22798285	True	NR_003921,NM_004061	chr5,chr5	+,-	PMCHL1,CDH12	-654651,55506
chr2:32265107-32266481	chr2	+	32265143	32265952	True	NM_032574,NM_014946	chr2,chr2	-,+	DPY30,SPAST	-299,22727
chr1:157814326-157815656	chr1	+	157814374	157815439	True	NM_005894,NM_018240	chr1,chr1	-,+	CD5L,KIRREL	-2740,147623
chr10:6244338-6244566	chr10	+	6244354	6244522	True	NM_004566,NM_000417	chr10,chr10	+,-	PFKFB3,IL2RA	317,-140021
chr15:76228287-76229570	chr15	+	76228481	76229539	True	NR_003136,NR_037623	chr15,chr15	-,+	FBXO22OS,FBXO22	-3010,-32333
chr12:122019995-122020612	chr12	+	122020047	122020613	True	NM_032590,NM_032790,NM_001005366	chr12,chr12,chr12	-,+,-	KDM2B,ORAI1,KDM2B	-1127,43841,-1683
chr19:14607722-14608101	chr19	+	14607729	14608137	True	NM_001146693,NM_202494,NM_202468,NM_005716,NM_202469,NM_202467,NM_202470	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,-,-,-,-,-	LOC100130932,GIPC1,GIPC1,GIPC1,GIPC1,GIPC1,GIPC1	-8023,-785,-785,-785,-785,-785,-785
chr16:698335-698752	chr16	+	698441	698747	True	NM_138418,NM_032366,NM_145294	chr16,chr16,chr16	+,-,+	FAM195A,C16orf13,WDR90	-6644,-12094,615
chr14:58707017-58707430	chr14	+	58707021	58707443	True	NM_152132,NM_002788,NR_029434	chr14,chr14,chr14	+,+,-	PSMA3,PSMA3,FLJ31306	4149,4149,57462
chr17:8769874-8770526	chr17	+	8770131	8770575	True	NM_004822,NM_001010855	chr17,chr17	+,-	NTN1,PIK3R6	154283,471
chr14:102822471-102823195	chr14	+	102822770	102823172	True	NM_001177612,NM_001177611,NM_032630,NM_014844,NM_001172631	chr14,chr14,chr14,chr14,chr14	-,-,-,+,+	CINP,CINP,CINP,TECPR2,TECPR2	6135,5933,6135,6127,6127
chr21:44867480-44868268	chr21	+	44867546	44868134	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	1769,-20544
chr12:49184677-49184911	chr12	+	49184789	49184857	True	NM_000725,NM_020983,NM_015270	chr12,chr12,chr12	+,-,-	CACNB3,ADCY6,ADCY6	27654,-1969,-6912
chr12:109251763-109252341	chr12	+	109252067	109252280	True	NM_001917,NM_001161330,NM_018984	chr12,chr12,chr12	+,-,-	DAO,SSH1,SSH1	21576,-708,-708
chr6:42859089-42859485	chr6	+	42859354	42859470	True	NM_001008739,NM_198486	chr6,chr6	-,+	C6orf226,RPL7L1	-800,-11734
chr14:93387299-93389100	chr14	+	93388164	93389005	True	NM_005606,NM_001275	chr14,chr14	-,+	LGMN,CHGA	-173117,439
chr11:27720940-27721220	chr11	+	27721064	27721196	True	NM_170734,NR_033315,NM_170733,NM_001143812,NM_001143813,NM_001709,NM_001143811,NM_001143809,NM_001143808,NM_001143814,NM_001143810	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,+,-,-,-,-,-,-,-,-,-	BDNF,BDNF-AS1,BDNF,BDNF,BDNF,BDNF,BDNF,BDNF,BDNF,BDNF,BDNF	68,-192716,2034,1301,889,889,1454,1454,1454,889,1454
chr3:194354686-194355348	chr3	+	194354698	194354851	True	NM_001011655,NM_001166305,NM_153690,NM_138399,NM_001166306	chr3,chr3,chr3,chr3,chr3	-,-,+,-,-	TMEM44,TMEM44,FAM43A,TMEM44,TMEM44	-548,-548,51770,-548,-548
chr6:119663087-119664197	chr6	+	119663157	119664249	True	NM_005907,NM_014034	chr6,chr6	-,+	MAN1A1,ASF1A	6730,-447975
chr6:35890000-35891078	chr6	+	35890161	35890910	True	NR_034069,NM_139013,NM_003137	chr6,chr6,chr6	-,+,-	SRPK1,MAPK14,SRPK1	-1204,104543,-1204
chr19:22017973-22018450	chr19	+	22018080	22018498	True	NR_024523,NM_003423	chr19,chr19	+,-	LOC641367,ZNF43	-84591,522
chr9:37120974-37121725	chr9	+	37121096	37121612	True	NM_016734,NM_032226	chr9,chr9	-,+	PAX5,ZCCHC7	-86620,-680
chr12:49183314-49184484	chr12	+	49183437	49184288	True	NM_000725,NM_020983,NM_015270	chr12,chr12,chr12	+,-,-	CACNB3,ADCY6,ADCY6	28223,-617,-5560
chr19:51227678-51227941	chr19	+	51227696	51227936	True	NM_016148,NM_002975	chr19,chr19	-,+	SHANK1,CLEC11A	-7501,-1142
chr6:26188872-26189775	chr6	+	26188871	26189610	True	NM_021065,NM_003530,NM_003523,NM_003539	chr6,chr6,chr6,chr6	-,-,+,-	HIST1H2AD,HIST1H3D,HIST1H2BE,HIST1H4D	9918,9911,-4902,-13
chrX:139588359-139588598	chrX	+	139588401	139588636	True	NR_028345,NM_005634	chrX,chrX	+,-	RP1-177G6.2,SOX3	203287,-1176
chr22:19513076-19513353	chr22	+	19513226	19513338	True	NM_001130861,NM_003277,NM_003504	chr22,chr22,chr22	-,-,+	CLDN5,CLDN5,CDC45	-366,-366,-45861
chr14:73496464-73496972	chr14	+	73496563	73496954	True	NM_021239,NM_021260	chr14,chr14	+,-	RBM25,ZFYVE1	28266,-2643
chr18:605019-606492	chr18	+	605053	606469	True	NM_014410,NM_001012716	chr18,chr18	+,-	CLUL1,C18orf56	-8117,51921
chr7:1023254-1023593	chr7	+	1023293	1023569	True	NM_017781,NM_001031617	chr7,chr7	+,-	CYP2W1,COX19	-509,-8058
chr11:13297210-13298294	chr11	+	13297252	13298274	True	NM_001030273,NM_001030272,NM_001178,NM_032320	chr11,chr11,chr11,chr11	+,+,+,-	ARNTL,ARNTL,ARNTL,BTBD10	1050,1050,1050,186614
chr8:85109883-85110670	chr8	+	85110102	85110492	True	NM_001100391,NM_001099670	chr8,chr8	+,-	RALYL,C8orf59	-13063,1022211
chr1:181453053-181454627	chr1	+	181453058	181454603	True	NM_005819,NM_000721	chr1,chr1	-,+	STX6,CACNA1E	-461012,-396
chr17:7589430-7589635	chr17	+	7589510	7589680	True	NM_001143992,NM_001143991,NM_001143990,NM_018081,NM_000546,NM_001126114,NM_001126112,NM_001126113	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,-,-,-,-	WRAP53,WRAP53,WRAP53,WRAP53,TP53,TP53,TP53,TP53	1986,1077,-178,1986,1233,1233,1233,1233
chr12:12846758-12847223	chr12	+	12846935	12847127	True	NM_004064,NM_006143	chr12,chr12	+,-	CDKN1B,GPR19	23174,2050
chr15:25485724-25486536	chr15	+	25485770	25486490	True	NR_003344,NR_003358,NR_003359,NM_130838,NR_003353,NR_003352,NR_003351,NR_003350,NR_003357,NR_003356,NR_003355,NR_003354,NR_003302,NR_003303,NR_003348,NR_003349	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,-,+,+,+,+,+,+,+,+,+,+,+,+	SNORD115-29,SNORD115-43,SNORD115-44,UBE3A,SNORD115-38,SNORD115-37,SNORD115-36,SNORD115-35,SNORD115-42,SNORD115-41,SNORD115-40,SNORD115-39,SNORD115-10,SNORD115-11,SNORD115-33,SNORD115-34	-4589,-4589,9515,164213,-836,-2688,-4589,-6427,6001,4134,2270,402,6001,-4589,-9836,-8287
chr15:28817535-28819510	chr15	+	28817915	28819354	True	NR_036443,NR_033351	chr15,chr15	+,-	HERC2P9,GOLGA8F	80233,-39772
chr15:28817535-28819510	chr15	-	28582565	28584004	False	NM_004667,NR_033351	chr15,chr15	-,+	HERC2,GOLGA8F	-15270,39779
chr15:28817535-28819510	chr15	-	20728053	20728103	False	NR_036432,NR_027411	chr15,chr15	-,+	HERC2P3,GOLGA8C	-16620,39570
chr15:28817535-28819510	chr15	-	23394847	23394897	False	NR_036470,NR_002824	chr15,chr15	+,-	HERC2P7,HERC2P2	-4176,-16588
chr5:146614641-146616591	chr5	+	146614740	146616426	True	NM_181678,NM_145001,NM_001112724	chr5,chr5,chr5	-,+,+	PPP2R2B,STK32A,STK32A	-153707,-219,-219
chr8:22022576-22022922	chr8	+	22022589	22022874	True	NM_139278,NM_001199,NM_001172357,NR_033403,NR_033404,NM_001172410,NM_006129,NM_003018	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,+,+,+,+,+,+,+	LGI3,BMP1,SFTPC,BMP1,BMP1,SFTPC,BMP1,SFTPC	-8245,9,-3456,9,9,-3456,9,-3456
chrX:9758332-9758903	chrX	+	9758343	9758917	True	NM_000273,NM_001649	chrX,chrX	-,+	GPR143,SHROOM2	-24338,-3898
chr17:58214234-58215005	chr17	+	58214252	58214740	True	NM_000717,NR_027408	chr17,chr17	+,-	CA4,LOC653653	12561,-33972
chr16:57312174-57312661	chr16	+	57312225	57312659	True	NM_015993,NM_012106	chr16,chr16	-,+	PLLP,ARL2BP	5975,-33238
chr13:39567654-39569216	chr13	+	39567656	39568833	True	NM_001012754,NM_001144033,NM_145286	chr13,chr13,chr13	+,-,-	NHLRC3,STOML3,STOML3	43621,-2660,-2660
chr3:9888123-9888742	chr3	+	9888310	9888716	True	NR_037162,NM_173659,NM_001142547	chr3,chr3,chr3	+,-,-	TTLL3,RPUSD3,RPUSD3	-36717,-2608,-2608
chr1:155894976-155896211	chr1	+	155895353	155896036	True	NM_014949,NR_002974,NM_181885,NR_003005	chr1,chr1,chr1,chr1	-,-,+,-	KIAA0907,SNORA42,RXFP4,SCARNA4	8203,-5520,15443,44
chr1:116928468-116930377	chr1	+	116928786	116930181	True	NM_001160234,NR_024126	chr1,chr1	+,-	ATP1A1,ATP1A1OS	-2847,31053
chr11:36433276-36433662	chr11	+	36433317	36433697	True	NM_001160169,NM_004620	chr11,chr11	+,-	PRR5L,TRAF6	-10821,98175
chr12:95467238-95468029	chr12	+	95467253	95467970	True	NM_001127362,NM_017599,NM_001032287,NM_003297	chr12,chr12,chr12,chr12	-,+,-,-	NR2C1,VEZT,NR2C1,NR2C1	-131,143551,-131,-131
chr1:213180290-213180824	chr1	+	213180489	213180879	True	NM_144567,NM_001136138	chr1,chr1	-,+	ANGEL2,RPS6KC1	8345,43708
chr1:52870938-52871912	chr1	+	52870981	52871571	True	NM_032864,NM_004153,NM_001190818,NM_001190819	chr1,chr1,chr1,chr1	+,-,-,-	PRPF38A,ORC1,ORC1,ORC1	-820,-838,-838,-838
chr6:37467429-37467647	chr6	+	37467507	37467657	True	NM_015050,NM_138493	chr6,chr6	+,-	FTSJD2,C6orf129	-66651,93
chrX:152226566-152227430	chrX	+	152226606	152227368	True	NM_032882,NM_013364	chrX,chrX	-,+	PNMA6A,PNMA3	18640,-1891
chr12:110562507-110563290	chr12	+	110562589	110563127	True	NM_207435,NM_031473,NM_001143779,NM_014055	chr12,chr12,chr12,chr12	-,+,+,+	C12orf76,IFT81,IFT81,IFT81	-57089,-500,-500,-500
chr1:152191048-152191363	chr1	+	152191154	152191232	True	NM_001009931,NM_178438	chr1,chr1	-,+	HRNR,LCE5A	5487,292087
chr8:28173808-28174108	chr8	+	28173918	28174136	True	NM_018660,NM_006228	chr8,chr8	-,+	ZNF395,PNOC	69891,512
chr12:121342617-121343014	chr12	+	121342666	121343060	True	NM_139015,NM_000545	chr12,chr12	-,+	SPPL3,HNF1A	-515,73488
chr4:188862256-188864231	chr4	+	188862436	188864061	True	NM_173553,NM_174900	chr4,chr4	-,+	TRIML2,ZFP42	162404,52863
chr17:36981377-36981585	chr17	+	36981434	36981604	True	NM_017748,NM_006148	chr17,chr17	-,+	CWC25,LASP1	35,44507
chr3:115409761-115411475	chr3	+	115410172	115411405	True	NM_002045,NM_015642	chr3,chr3	+,-	GAP43,ZBTB20	-68079,-544045
chr16:34715313-34715852	chr16	+	34715539	34715884	True	NR_026980,NR_027079	chr16,chr16	-,+	LOC146481,LOC283914	-572,-117713
chr1:109967252-109968627	chr1	+	109967699	109968612	True	NM_001199774,NM_002790,NM_001040709,NM_001199772,NM_001199773	chr1,chr1,chr1,chr1,chr1	-,-,+,-,-	PSMA5,PSMA5,SYPL2,PSMA5,PSMA5	547,509,40487,509,520
chr3:101301218-101302314	chr3	+	101301368	101301872	True	NM_020654,NM_020357	chr3,chr3	-,+	SENP7,PCNP	-69283,-8391
chr4:110214073-110215808	chr4	+	110214234	110215823	True	NM_032518,NM_198721,NM_001042734	chr4,chr4,chr4	-,-,+	COL25A1,COL25A1,SEC24B	8026,8026,139147
chr5:137666287-137666587	chr5	+	137666491	137666603	True	NM_001135647,NM_001790,NM_022809,NM_016605	chr5,chr5,chr5,chr5	+,-,-,+	FAM53C,CDC25C,CDC25C,FAM53C	6620,963,963,7100
chr17:15899869-15900192	chr17	+	15899919	15899979	True	NM_001042698,NR_037985,NM_017775,NM_001042697	chr17,chr17,chr17,chr17	-,+,+,-	ZSWIM7,TTC19,TTC19,ZSWIM7	3077,2714,2714,3077
chr10:6104205-6104645	chr10	+	6104251	6104614	True	NM_032905,NM_000417	chr10,chr10	+,-	RBM17,IL2RA	26334,38
chr15:34395137-34396326	chr15	+	34395210	34396288	True	NM_152595,NM_020154	chr15,chr15	+,-	PGBD4,C15orf24	-989,-1157
chr14:24684382-24684772	chr14	+	24684694	24684774	True	NM_174944,NM_001199821,NM_001199822,NM_014169,NM_001184739,NM_138476	chr14,chr14,chr14,chr14,chr14,chr14	+,-,-,-,+,-	TSSK4,MDP1,MDP1,CHMP4A,TSSK4,MDP1	-9819,552,552,-1658,-9819,552
chr4:168154863-168155065	chr4	+	168154896	168154968	True	NM_001204359,NM_001204358,NM_001204355,NM_001204354,NM_001204357,NM_001204356,NM_001204353,NM_001204352,NM_001040159,NM_016950,NM_007193	chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4	-,-,-,-,-,-,-,-,-,-,+	SPOCK3,SPOCK3,SPOCK3,SPOCK3,SPOCK3,SPOCK3,SPOCK3,SPOCK3,SPOCK3,SPOCK3,ANXA10	823,823,823,823,823,823,659,823,823,823,858719
chr1:8081918-8082430	chr1	+	8081964	8082376	True	NM_007262,NM_018948	chr1,chr1	+,-	PARK7,ERRFI1	-60301,4067
chr16:3627495-3629051	chr16	+	3627558	3629076	True	NM_024793,NM_178844	chr16,chr16	+,-	CLUAP1,NLRC3	-67715,-166
chr1:182641095-182641365	chr1	+	182641094	182641317	True	NM_001102450,NM_033345,NR_036490	chr1,chr1,chr1	-,-,+	RGS8,RGS8,LOC284648	801,801,-56870
chr6:36206487-36207341	chr6	+	36206540	36207034	True	NM_001010903,NM_001145716,NM_173676	chr6,chr6,chr6	-,+,+	C6orf222,PNPLA1,PNPLA1	97678,3945,3910
chr12:57622722-57623071	chr12	+	57622726	57623110	True	NM_005412,NM_020142,NR_029415,NR_029416,NR_029417,NM_001166358,NM_001166359,NM_001166356,NM_001166357	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,-,+,+,+,+,+,+,+	SHMT2,NDUFA4L2,SHMT2,SHMT2,SHMT2,SHMT2,SHMT2,SHMT2,SHMT2	245,11415,1000,717,245,717,1000,245,1032
chr17:79919931-79920349	chr17	+	79920101	79920269	True	NM_178493,NM_024083	chr17,chr17	-,+	NOTUM,ASPSCR1	-1044,15156
chr5:140856130-140856429	chr5	+	140856169	140856429	True	NM_002588,NM_018928,NM_001079812,NM_032406,NM_032402,NM_032403	chr5,chr5,chr5,chr5,chr5,chr5	+,+,-,+,+,+	PCDHGC3,PCDHGC4,DIAPH1,PCDHGC4,PCDHGC3,PCDHGC3	-655,8311,142243,8311,-655,-655
chrX:106875212-106876372	chrX	+	106875235	106876350	True	NM_002764,NM_001015881,NM_001204402	chrX,chrX,chrX	+,-,+	PRPS1,TSC22D3,PRPS1	-3644,83419,-3644
chr16:89687470-89687801	chr16	+	89687586	89687668	True	NM_001083314,NM_001128141,NM_004413	chr16,chr16,chr16	-,+,+	CHMP1A,DPEP1,DPEP1	36511,-7921,-637
chrX:24150048-24150925	chrX	+	24150057	24150937	True	NM_030624,NM_001178086	chrX,chrX	-,+	KLHL15,ZFX	-104754,16824
chr2:231279611-231279914	chr2	+	231279610	231279808	True	NM_001185015,NM_001080391,NM_003113	chr2,chr2,chr2	-,+,+	SP110,SP100,SP100	-189166,1062,1062
chr5:138859467-138859932	chr5	+	138859604	138859830	True	NM_198282,NM_003339	chr5,chr5	-,+	TMEM173,UBE2D2	2563,80920
chr3:48670776-48671440	chr3	+	48670793	48671345	True	NM_001040454,NM_134263,NM_033629,NM_022911,NM_134426	chr3,chr3,chr3,chr3,chr3	-,-,+,-,-	SLC26A6,SLC26A6,TREX1,SLC26A6,SLC26A6	-16,1631,-163615,1631,1631
chr1:47488254-47488999	chr1	+	47488261	47489030	True	NM_000778,NM_178033	chr1,chr1	-,+	CYP4A11,CYP4X1	-81105,209
chr1:242674069-242675402	chr1	+	242674338	242675419	True	NM_006027,NM_152666	chr1,chr1	+,-	EXO1,PLD5	-662357,12636
chr12:120805447-120805759	chr12	+	120805516	120805708	True	NM_012240,NM_002442	chr12,chr12	+,-	SIRT4,MSI1	-65443,1300
chr13:27823780-27824712	chr13	+	27823883	27824759	True	NM_000982,NR_002574,NM_182488,NR_026911,NR_002575	chr13,chr13,chr13,chr13,chr13	+,+,-,+,+	RPL21,SNORD102,USP12,RPL21P28,SNORA27	932,4441,-77850,933,4778
chr20:18548538-18549006	chr20	+	18548547	18548987	True	NM_006606,NR_015432	chr20,chr20	-,+	RBBP9,LOC388789	-70660,-530
chr19:3027744-3028427	chr19	+	3027818	3028368	True	NM_003260,NM_001144762,NM_024760	chr19,chr19,chr19	-,-,+	TLE2,TLE2,TLE6	847,1294,-50336
chr19:33210894-33211756	chr19	+	33210954	33211225	True	NM_001110822,NM_032139	chr19,chr19	+,-	TDRD12,ANKRD27	-326,-44852
chr11:105480345-105480735	chr11	+	105480345	105480759	True	NM_032424,NM_001077243,NM_001112812,NM_001077244,NM_000829	chr11,chr11,chr11,chr11,chr11	-,+,+,+,+	KIAA1826,GRIA4,GRIA4,GRIA4,GRIA4	412245,40,651,40,40
chr12:57708144-57708732	chr12	+	57708286	57708518	True	NM_014925,NM_001166357	chr12,chr12	-,+	R3HDM2,SHMT2	-4040,-84198
chr8:22297007-22297766	chr8	+	22297147	22297746	True	NM_005605,NR_029714	chr8,chr8	+,-	PPP3CC,MIR320A	849,-194591
chr16:67282995-67283236	chr16	+	67283015	67283275	True	NM_013241,NM_004594	chr16,chr16	-,+	FHOD1,SLC9A5	-1590,-211
chr16:22216829-22217376	chr16	+	22216847	22217423	True	NM_001802,NM_013302	chr16,chr16	-,+	CDR2,EEF2K	168565,168
chr17:16944122-16945484	chr17	+	16944320	16945292	True	NM_015134,NM_201274,NM_012452	chr17,chr17,chr17	+,+,-	MPRIP,MPRIP,TNFRSF13B	814,814,-68918
chr3:98620888-98622465	chr3	+	98621078	98622236	True	NM_006100,NM_080927	chr3,chr3	+,-	ST3GAL6,DCBLD2	-169559,-545
chr1:1859909-1860120	chr1	+	1860044	1860114	True	NM_138705,NM_178545	chr1,chr1	+,-	CALML6,TMEM52	-13829,-9304
chr12:54691372-54691772	chr12	+	54691490	54691607	True	NM_001136023,NM_006163,NR_002944	chr12,chr12,chr12	-,-,+	NFE2,NFE2,HNRNPA1P10	3243,-1946,-17010
chr19:43441340-43442632	chr19	+	43441809	43442589	True	NM_002783,NR_036584	chr19,chr19	-,+	PSG7,LOC100289650	-479,-115845
chrX:145702230-145702505	chrX	+	145702236	145702296	True	NM_001144064	chrX	+	CXorf51	189005
chr2:238707094-238707413	chr2	+	238707127	238707391	True	NM_001080504,NR_033308	chr2,chr2	+,-	RBM44,RAB17	-4,-207358
chr8:55014602-55014845	chr8	+	55014641	55014795	True	NM_014175,NM_006330	chr8,chr8	+,-	MRPL15,LYPLA1	32985,-64
chr14:96728318-96728719	chr14	+	96728332	96728766	True	NM_018036,NM_000710	chr14,chr14	-,+	ATG2B,BDKRB1	100962,-5824
chr11:22728052-22729875	chr11	+	22728679	22729802	True	NM_005256,NM_022725	chr11,chr11	+,-	GAS2,FANCF	-32411,-81292
chr19:1941797-1942120	chr19	+	1941796	1942126	True	NR_033400,NM_001319	chr19,chr19	-,+	C19orf34,CSNK1G2	12472,-686
chr22:29660199-29661060	chr22	+	29660377	29660697	True	NM_012265,NM_005243,NM_013986,NM_001163285,NM_001163287,NM_001163286	chr22,chr22,chr22,chr22,chr22,chr22	-,+,+,+,+,+	RHBDD3,EWSR1,EWSR1,EWSR1,EWSR1,EWSR1	3267,3300,3300,3300,3300,3300
chr20:30638329-30639260	chr20	+	30638385	30639175	True	NM_030815,NM_002110,NM_001172129,NM_001172131,NM_001172130,NM_001172133,NM_001172132	chr20,chr20,chr20,chr20,chr20,chr20,chr20	-,+,+,+,+,+,+	PDRG1,HCK,HCK,HCK,HCK,HCK,HCK	-98502,815,815,815,815,815,815
chr19:14492541-14493687	chr19	+	14492681	14493373	True	NM_078481,NM_001025160,NM_001204057,NM_001784	chr19,chr19,chr19,chr19	+,+,-,+	CD97,CD97,DDX39A,CD97	-519,-519,36589,-519
chr14:55658345-55659883	chr14	+	55658364	55659629	True	NR_003225,NM_001146015,NM_014750	chr14,chr14,chr14	+,-,-	LGALS3,DLGAP5,DLGAP5	-54714,32,32
chr22:35518331-35519118	chr22	+	35518575	35519014	True	NM_001008494,NM_005368	chr22,chr22	+,-	ISX,MB	-56509,494421
chr2:219087261-219088393	chr2	+	219087322	219088054	True	NM_005731,NM_001087,NM_152862	chr2,chr2,chr2	+,-,+	ARPC2,AAMP,ARPC2	-5255,46889,-5501
chr3:196438476-196438910	chr3	+	196438490	196438864	True	NM_017861,NM_032898,NM_001166304	chr3,chr3,chr3	+,-,+	PIGX,C3orf34,PIGX	380,309,380
chr8:67686219-67686844	chr8	+	67686309	67686837	True	NR_002734,NM_013257,NM_170709	chr8,chr8,chr8	-,+,+	PTTG3P,SGK3,SGK3	-6069,578,578
chr17:42080877-42081918	chr17	+	42081461	42081797	True	NM_004160,NM_153006	chr17,chr17	-,+	PYY,NAGS	90,234
chr3:153850803-153851438	chr3	+	153850853	153851255	True	NR_037901,NM_015595	chr3,chr3	-,+	LOC100507524,ARHGEF26	-11854,-11767
chr12:25402185-25403293	chr12	+	25402554	25403210	True	NM_001001660,NM_004985,NM_033360	chr12,chr12,chr12	+,-,-	LYRM5,KRAS,KRAS	-54461,694,694
chr7:143077139-143077475	chr7	+	143077158	143077387	True	NM_001010972,NM_001031690,NM_003461	chr7,chr7,chr7	+,-,+	ZYX,FAM131B,ZYX	972,-17318,972
chr19:53326557-53327117	chr19	+	53326799	53326971	True	NR_036599,NR_036600,NM_152473,NM_006969	chr19,chr19,chr19,chr19	-,-,+,-	ZNF28,ZNF28,HERV-V1,ZNF28	-1877,-1877,190372,-1877
chr19:36205050-36205599	chr19	+	36205140	36205508	True	NM_014727,NM_024660,NM_014383	chr19,chr19,chr19	+,-,+	MLL4,IGFLR1,ZBTB32	3412,27893,-1361
chr1:28105056-28106461	chr1	+	28105247	28106216	True	NM_177424,NM_022873	chr1,chr1	+,-	STX12,IFI6	-5615,-106523
chr22:31000542-31002531	chr22	+	31000734	31002090	True	NR_036550,NM_000355,NM_001184726	chr22,chr22,chr22	-,+,+	PES1,TCN2,TCN2	960,979,979
chr13:88343506-88344979	chr13	+	88343763	88344495	True	NM_015567,NR_033829	chr13,chr13	+,-	SLITRK5,LOC642345	-18954,-20545
chr16:1993410-1993612	chr16	+	1993590	1993658	True	NM_016332,NM_004548	chr16,chr16	-,+	SEPX1,NDUFB10	-296,15858
chrX:40599451-40601034	chrX	+	40599821	40600682	True	NM_004229,NM_001195522	chrX,chrX	-,+	MED14,LOC347411	-5017,-117062
chr14:70549658-70549965	chr14	+	70549719	70549987	True	NM_022137,NM_001130417,NM_182936	chr14,chr14,chr14	+,-,-	SMOC1,SLC8A3,SLC8A3	-203656,-2796,-2801
chr16:21530314-21530783	chr16	+	21530494	21530800	True	NM_001077180,NR_002594	chr16,chr16	+,-	METTL9,SLC7A5P2	80055,1015
chr16:21530314-21530783	chr16	+	29623877	29624075	False	NR_002593,NM_001030288	chr16,chr16	-,+	SLC7A5P1,SPN	1013,50224
chr4:174312438-174314011	chr4	+	174312465	174313677	True	NM_007281,NM_003864	chr4,chr4	-,+	SCRG1,SAP30	6996,-20423
chr2:73964154-73964377	chr2	+	73964167	73964377	True	NM_001080474,NM_016058	chr2,chr2	+,-	C2orf78,TPRKB	46938,190
chr2:192119699-192120985	chr2	+	192120022	192120985	True	NM_001130158,NM_012223,NM_003151,NM_001161819	chr2,chr2,chr2,chr2	+,+,-,+	MYO1B,MYO1B,STAT4,MYO1B	-9978,-9978,-104097,-9831
chr10:35496624-35497531	chr10	+	35496732	35497513	True	NM_001198777,NM_182725	chr10,chr10	-,+	CUL2,CREM	-117162,-11954
chr22:42397358-42398028	chr22	+	42397458	42397828	True	NM_152613,NM_024053	chr22,chr22	+,-	WBP2NL,CENPM	-2781,-54310
chr8:27630198-27631845	chr8	+	27630214	27631841	True	NM_018246,NM_001017420	chr8,chr8	-,+	CCDC25,ESCO2	-44,216
chr22:25758208-25758619	chr22	+	25758265	25758479	True	NR_029395,NM_182492	chr22,chr22	+,-	IGLL3P,LRP5L	-44092,95
chr12:64063080-64064777	chr12	+	64063394	64064817	True	NM_014254,NM_173812	chr12,chr12	+,-	TMEM5,DPY19L2	108819,-1040
chr11:100556651-100557204	chr11	+	100557079	100557249	True	NM_001202474,NM_152432	chr11,chr11	-,+	PGR,ARHGAP42	442595,1157
chr20:52825498-52825770	chr20	+	52825517	52825800	True	NM_001128915,NM_002623	chr20,chr20	-,+	CYP24A1,PFDN4	-35001,-1072
chr17:80290309-80290614	chr17	+	80290438	80290498	True	NM_003004,NM_207459	chr17,chr17	-,+	SECTM1,TEX19	1473,26624
chr5:96143309-96143521	chr5	+	96143349	96143567	True	NM_001198541,NM_001040458,NM_016442,NR_033798	chr5,chr5,chr5,chr5	-,-,-,+	ERAP1,ERAP1,ERAP1,CAST	6331,375,375,-64156
chrX:15692859-15693473	chrX	+	15692864	15693437	True	NM_020665,NR_026551	chrX,chrX	-,+	TMEM27,CA5BP1	-9710,18
chr1:196946230-196946445	chr1	+	196946333	196946415	True	NM_030787,NM_001994	chr1,chr1	+,-	CFHR5,F13B	251,90032
chr13:31040361-31040677	chr13	+	31040369	31040691	True	NM_005800,NM_002128	chr13,chr13	+,-	USPL1,HMGB1	151138,-288
chr6:66498500-66498717	chr6	+	66498572	66498773	True	NR_026540,NM_001142801	chr6,chr6	+,-	MCART3P,EYS	-851,-81454
chr10:60028212-60028448	chr10	+	60028364	60028492	True	NM_152230,NM_018464	chr10,chr10	-,+	IPMK,CISD1	-670,402
chr4:4389871-4390072	chr4	+	4390040	4390112	True	NM_017816,NM_014392,NM_001040101	chr4,chr4,chr4	-,+,+	LYAR,D4S234E,D4S234E	-98144,-2108,-2108
chr19:54643169-54643380	chr19	+	54643258	54643336	True	NM_014516,NM_024316	chr19,chr19	+,-	CNOT3,LENG1	-1873,20160
chr6:71318262-71318500	chr6	+	71318261	71318539	True	NM_145267,NM_001851	chr6,chr6	+,-	C6orf57,COL9A1	-41695,-305475
chr6:71318262-71318500	chr5	-	43207506	43207564	False	NM_153361,NM_001098272	chr5,chr5	+,-	MGC42105,HMGCS1	-15238,106089
chr6:71318262-71318500	chr1	-	160865266	160865316	False	NM_002348,NM_017625	chr1,chr1	+,-	LY9,ITLN1	-99389,-10306
chrX:153170345-153170621	chrX	+	153170368	153170570	True	NM_001164741,NM_001146151,NM_000054,NR_027419	chrX,chrX,chrX,chrX	-,+,+,+	ARHGAP4,AVPR2,AVPR2,AVPR2	21194,0,0,-2434
chr17:44656954-44657392	chr17_ctg5_hap1	-	391278	391694	False	NM_001039083,NM_001113738,NM_001103154,NM_016632,NM_006178	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	+,+,+,+,-	ARL17B,ARL17A,ARL17B,ARL17A,NSF	37,8,37,8,-10663
chr17:44656954-44657392	chr17_ctg5_hap1	+	1513772	1514188	False	NM_016632,NR_033799	chr17_ctg5_hap1,chr17_ctg5_hap1	-,+	ARL17A,NSFP1	-8,10724
chr17:44656954-44657392	chr17	+	44656976	44657392	True	NM_001113738,NM_016632,NM_006178	chr17,chr17,chr17	-,-,+	ARL17A,ARL17A,NSF	-8,-8,10645
chr17:44656954-44657392	chr17	+	44439051	44439347	False	NM_001039083,NM_001113738,NM_001103154,NM_016632,NR_033799	chr17,chr17,chr17,chr17,chr17	-,-,-,-,+	ARL17B,ARL17A,ARL17B,ARL17A,NSFP1	-37,-8,-37,-8,10831
chr17:3869584-3870271	chr17	+	3869802	3870188	True	NM_174958,NM_144611,NM_174953,NM_174955,NM_174954,NM_174957,NM_174956,NM_005173	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,-,-,-,-,-,-	ATP2A3,CYB5D2,ATP2A3,ATP2A3,ATP2A3,ATP2A3,ATP2A3,ATP2A3	-2066,176273,-2066,-2066,-2066,-2066,-2066,-2066
chr19:47841185-47842867	chr19	+	47841356	47842539	True	NM_001009813,NM_014681,NM_018485	chr19,chr19,chr19	-,+,+	MEIS3,DHX34,GPR77	80296,9998,-1036
chr11:66627720-66628042	chr11	+	66627727	66628031	True	NM_024036,NM_022172	chr11,chr11	+,-	LRFN4,PC	-2902,47359
chr14:39737789-39739696	chr14	+	39737818	39739397	True	NM_005930,NM_203355,NM_203356,NM_177452,NM_203354	chr14,chr14,chr14,chr14,chr14	+,+,+,-,+	CTAGE5,CTAGE5,CTAGE5,TRAPPC6B,CTAGE5	-1545,-1545,-2371,-98184,-3397
chr7:96636914-96638180	chr7	+	96637216	96638218	True	NM_005222,NR_015448	chr7,chr7	+,-	DLX6,DLX6-AS1	-1977,5216
chr5:171882058-171882567	chr5	+	171882064	171882563	True	NM_001017995,NM_001142651	chr5,chr5	-,+	SH3PXD2B,NEURL1B	-537,185712
chr9:72900093-72901098	chr9	+	72900286	72901050	True	NM_001206,NM_015110	chr9,chr9	-,+	KLF9,SMC5	128581,-26465
chr7:5551798-5552974	chr7	+	5552363	5552827	True	NM_024963,NM_003088	chr7,chr7	-,+	FBXL18,FSCN1	622,79626
chr1:117905113-117905805	chr1	+	117905541	117905803	True	NM_006699,NM_024626	chr1,chr1	+,-	MAN1A2,VTCN1	4281,-151992
chr7:4923662-4925422	chr7	+	4923717	4925442	True	NM_018059,NR_015449	chr7,chr7	-,+	RADIL,RNF216L	-382,88173
chr3:122748955-122750691	chr3	+	122749022	122750658	True	NM_006810,NM_001031702	chr3,chr3	+,-	PDIA5,SEMA5B	35197,-2446
chr22:41460225-41460562	chr22	+	41460236	41460496	True	NM_138481,NR_031694	chr22,chr22	-,+	CHADL,MIR1281	176489,28020
chr17:71254599-71255613	chr17	+	71254752	71255454	True	NM_001129885,NM_017941	chr17,chr17	-,+	CPSF4L,C17orf80	2615,-26027
chr9:138412550-138413337	chr9	+	138412797	138413351	True	NM_144654,NM_002297	chr9,chr9	-,+	C9orf116,LCN1	-21036,-66
chr2:175110512-175110950	chr2	+	175110678	175110761	True	NM_013341,NM_001011708,NM_001145250	chr2,chr2,chr2	-,-,+	OLA1,OLA1,SP9	2667,2667,89059
chr6:159239088-159239296	chr6	+	159239095	159239207	True	NM_001111077,NM_003379,NM_001195032	chr6,chr6,chr6	-,-,+	EZR,EZR,C6orf99	1299,183,70411
chr17:19993776-19994681	chr17	+	19993779	19994684	True	NM_001033553,NM_152904,NM_007202	chr17,chr17,chr17	+,+,-	SPECC1,SPECC1,AKAP10	-3496,-3496,-112650
chr20:54988696-54989726	chr20	+	54988753	54989692	True	NM_020356,NM_001164114,NM_001164115,NM_001164116,NM_198437	chr20,chr20,chr20,chr20,chr20	+,+,+,+,-	CASS4,CASS4,CASS4,CASS4,AURKA	-1502,-1502,-1502,-1648,-21402
chrX:123094766-123095247	chrX	+	123094773	123095262	True	NM_001042751,NM_001042750,NM_006603,NM_001081550,NM_001042749	chrX,chrX,chrX,chrX,chrX	+,+,+,-,+	STAG2,STAG2,STAG2,THOC2,STAG2	293,293,293,-227869,-349
chr6:134625169-134625644	chr6	+	134625171	134625397	True	NM_004865,NM_001143676	chr6,chr6	+,-	TBPL1,SGK1	-350921,13849
chr11:65405056-65405349	chr11	+	65405073	65405345	True	NM_002419,NM_006747,NM_153253	chr11,chr11,chr11	-,+,+	MAP3K11,SIPA1,SIPA1	-23353,232,2246
chr6:42163925-42164875	chr6	+	42164300	42164775	True	NM_000409,NM_002098	chr6,chr6	+,-	GUCA1A,GUCA1B	-41207,-1606
chr2:173684486-173686000	chr2	+	173684531	173686011	True	NR_026995,NM_001100397	chr2,chr2	-,+	LOC91149,RAPGEF4	-83597,303
chr6:108582098-108582356	chr6	+	108582098	108582384	True	NM_145315,NM_152827,NM_003795	chr6,chr6,chr6	+,-,-	LACE1,SNX3,SNX3	33713,130,130
chr16:4783590-4783901	chr16	+	4783778	4783844	True	NM_133450,NM_139170	chr16,chr16	-,+	ANKS3,C16orf71	369,444
chr19:15938936-15939311	chr19	+	15938942	15939218	True	NM_013940,NR_015379	chr19,chr19	-,+	OR10H1,UCA1	-20006,538
chr1:151776311-151776895	chr1	+	151776422	151776744	True	NR_024237,NM_001004432	chr1,chr1	+,-	LOC100132111,LINGO4	34200,1188
chr19:44618822-44620104	chr19	+	44618996	44620031	True	NM_013362,NR_033341	chr19,chr19	+,-	ZNF225,LOC100379224	-1506,-1660
chr14:20975371-20975939	chr14	+	20975801	20975872	True	NM_144568,NM_001012975	chr14,chr14	-,+	TMEM55B,RNASE10	-46164,2758
chr7:22894301-22895445	chr7	+	22894372	22895300	True	NM_019059,NR_003075	chr7,chr7	-,+	TOMM7,SNORD93	-31951,931
chr16:23569416-23570259	chr16	+	23569497	23570051	True	NM_019116,NR_003501,NM_001083614	chr16,chr16,chr16	+,-,-	UBFD1,EARS2,EARS2	-686,-801,-801
chr4:3313054-3314445	chr4	+	3313054	3314466	True	NM_002926,NM_198229,NM_002337	chr4,chr4,chr4	+,+,-	RGS12,RGS12,LRPAP1	1407,1407,219808
chr3:149689476-149691318	chr3	+	149689623	149691027	True	NM_053024,NM_002628,NR_036538	chr3,chr3,chr3	-,-,+	PFN2,PFN2,LOC646903	-882,-882,-612
chr11:66823735-66824221	chr11	+	66823755	66824203	True	NM_014578,NM_001040716	chr11,chr11	+,-	RHOD,PC	85,-97908
chr4:141074862-141075422	chr4	+	141074956	141075372	True	NM_018717,NM_032547	chr4,chr4	-,+	MAML3,SCOC	87,103067
chr20:23474514-23474875	chr20	+	23474533	23474801	True	NM_005492,NM_130794	chr20,chr20	+,-	CST8,CST11	-2825,-41051
chr14:103766125-103766710	chr14	+	103766441	103766515	True	NR_033938,NM_001969	chr14,chr14	-,+	LOC100131366,EIF5	-111076,33977
chr5:141017669-141019180	chr5	+	141017668	141018814	True	NM_001130029,NM_173828,NM_003883	chr5,chr5,chr5	+,+,-	RELL2,RELL2,HDAC3	-1202,-1202,-1245
chr3:56716585-56716937	chr3	+	56716592	56716974	True	NR_024460,NM_001112736	chr3,chr3	+,-	CCDC66,C3orf63	-125459,211
chr12:110013840-110014053	chr12	+	110013854	110014098	True	NM_001114185,NM_000431,NM_052845	chr12,chr12,chr12	+,+,-	MVK,MVK,MMAB	-2405,-2405,-2496
chr3:57677877-57678193	chr3	+	57678001	57678225	True	NM_007159,NM_152678	chr3,chr3	+,-	SLMAP,FAM116A	64948,641
chr21:45970830-45971079	chr21	+	45970848	45970936	True	NM_198696,NM_198687,NM_198693	chr21,chr21,chr21	-,+,-	KRTAP10-3,KRTAP10-4,KRTAP10-2	7757,22669,502
chr3:178970678-178971101	chr3	+	178970894	178971153	True	NM_016331,NR_028135,NM_171829,NM_171830,NM_014407	chr3,chr3,chr3,chr3,chr3	+,-,-,-,-	ZNF639,KCNMB3,KCNMB3,KCNMB3,KCNMB3	70397,6579,6579,-1249,-1491
chr2:170507591-170508922	chr2	+	170508183	170508932	True	NM_001085447,NM_001008489	chr2,chr2	-,+	C2orf77,PHOSPHO2	42050,42031
chr21:46217552-46218176	chr21	+	46217655	46218213	True	NM_182688,NM_003343,NM_198699,NM_001202489	chr21,chr21,chr21,chr21	-,-,+,-	UBE2G2,UBE2G2,KRTAP10-12,UBE2G2	3588,3588,-100624,3588
chr14:78227057-78227259	chr14	+	78227060	78227280	True	NM_174943,NM_001173978,NM_012245	chr14,chr14,chr14	+,+,-	C14orf178,C14orf178,SNW1	-50,-50,267
chr20:20347783-20348024	chr20	+	20347832	20347968	True	NM_002196,NM_016652	chr20,chr20	+,-	INSM1,CRNKL1	796,-311142
chr11:72527318-72527563	chr11	+	72527367	72527611	True	NM_033388,NM_006645	chr11,chr11	+,-	ATG16L2,STARD10	-1967,-22617
chr19:1566104-1566457	chr19	+	1566109	1566327	True	NR_026557,NM_203304,NM_001174118	chr19,chr19,chr19	+,-,-	PLK5P,MEX3D,MEX3D	-42082,1780,1780
chr3:180357942-180359697	chr3	+	180358715	180359713	True	NM_133462,NM_181426	chr3,chr3	+,-	TTC14,CCDC39	-38848,37620
chr6:39020418-39021720	chr6	+	39020453	39021497	True	NM_002062,NM_018322	chr6,chr6	+,-	GLP1R,C6orf64	-3947,61426
chr8:145019973-145020184	chr8	+	145020005	145020141	True	NM_000837,NR_030383,NM_201379,NM_201384,NM_201381,NM_201380,NM_201383,NM_201382	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	+,-,-,-,-,-,-,-	GRINA,MIR661,PLEC,PLEC,PLEC,PLEC,PLEC,PLEC	44084,-558,7997,-6247,-1100,4953,-3313,-1895
chr3:49064266-49065226	chr3	+	49064370	49065042	True	NM_001009996,NM_199074,NM_199073,NR_029948,NM_199070,NM_000884,NR_029690,NM_018114,NM_199069	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,+,-,+,-,-,-,+	DALRD3,NDUFAF3,NDUFAF3,MIR425,NDUFAF3,IMPDH2,MIR191,DALRD3,NDUFAF3	-8353,-6513,-5803,-6703,-5347,1883,-6228,-5903,-5347
chr22:19141608-19142377	chr22	+	19142015	19142089	True	NM_005315,NM_053006,NM_022719	chr22,chr22,chr22	-,+,-	GSC2,TSSK2,DGCR14	-4219,-23745,-9825
chr12:106978510-106978716	chr12	+	106978529	106978701	True	NM_006825,NM_213594	chr12,chr12	-,+	CKAP4,RFX4	-336816,-1549
chr16:30717013-30717342	chr16	+	30717297	30717381	True	NR_002966,NM_001014979,NM_006662	chr16,chr16,chr16	+,-,+	SNORA30,C16orf93,SRCAP	4476,56234,-6886
chr6:79581680-79582863	chr6	+	79581748	79582435	True	NM_001010844,NM_017934	chr6,chr6	+,-	IRAK1BP1,PHIP	-4610,205633
chr9:19244119-19244458	chr9	+	19244306	19244463	True	NR_038064,NM_017925	chr9,chr9	-,+	PLIN2,DENND4C	-116702,46285
chr16:30379922-30380181	chr16	+	30379955	30380201	True	NM_013292,NM_015527	chr16,chr16	+,-	MYLPF,TBC1D10B	5921,1371
chr3:121936104-121937886	chr3	+	121936261	121937899	True	NM_001017928,NM_001178065	chr3,chr3	-,+	CCDC58,CASR	164225,-33132
chr21:40816343-40817357	chr21	+	40816596	40817215	True	NM_001001713,NM_007341,NM_152505	chr21,chr21,chr21	+,+,-	SH3BGR,SH3BGR,LCA5L	581,6564,-468
chr6:41856282-41856910	chr6	+	41856483	41856602	True	NM_018561,NM_004053	chr6,chr6	-,+	USP49,BYSL	6548,32362
chr14:50862876-50863305	chr14	+	50862966	50863278	True	NR_033761,NM_004196	chr14,chr14	+,-	ATP5S,CDKL1	-83971,-349
chr21:40179768-40179998	chr21	+	40179772	40179998	True	NR_027065,NM_005239	chr21,chr21	-,+	NCRNA00114,ETS2	-34371,-1974
chr9:43628423-43629137	chr9	+	43628556	43628892	True	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	1888,55992
chr12:51737619-51739600	chr12	+	51737920	51739501	True	NM_001971,NM_004858	chr12,chr12	-,+	CELA1,SLC4A8	1012,79092
chr22:25335067-25335985	chr22	+	25335090	25335858	True	NM_001145206,NM_001001663	chr22,chr22	+,-	KIAA1671,TMEM211	88082,106
chr3:169540157-169540577	chr3	+	169540199	169540525	True	NM_001080460,NM_001172779,NM_153353,NM_001172780	chr3,chr3,chr3,chr3	+,-,-,-	LRRIQ4,LRRC34,LRRC34,LRRC34	-540,-9625,-9625,-9625
chrX:102467832-102469151	chrX	+	102468142	102469051	True	NM_001080425,NM_001127688,NM_001006684	chrX,chrX,chrX	+,+,-	BEX4,BEX4,TCEAL8	968,968,41120
chr4:16263986-16264743	chr4	+	16264006	16264736	True	NM_153365,NR_027697	chr4,chr4	-,+	TAPT1,FLJ39653	-35845,-35779
chr15:59279444-59279740	chr15	+	59279451	59279731	True	NM_024755,NM_017610	chr15,chr15	-,+	SLTM,RNF111	-53599,133
chr20:10368381-10369372	chr20	+	10368393	10369371	True	NM_001009608,NM_018848	chr20,chr20	+,-	C20orf94,MKKS	46579,43250
chr4:2045493-2045741	chr4	+	2045570	2045714	True	NM_001168243,NM_001141936,NM_005663	chr4,chr4,chr4	+,+,-	C4orf48,C4orf48,WHSC2	-1901,-1844,-34611
chr15:40401704-40403155	chr15	+	40401714	40403135	True	NM_001003943,NM_001003942,NM_001003940,NM_001211,NM_033503	chr15,chr15,chr15,chr15,chr15	-,-,-,+,-	BMF,BMF,BMF,BUB1B,BMF	-3427,-3427,-639,50074,-3075
chr14:78077500-78077884	chr14	+	78077717	78077876	True	NM_031210,NM_004863	chr14,chr14	+,-	C14orf156,SPTLC2	96548,5287
chr9:36275018-36276024	chr9	+	36275112	36276063	True	NM_001128227,NM_001190388,NM_007096	chr9,chr9,chr9	-,-,+	GNE,GNE,CLTA	1041,1041,-84318
chr21:37536081-37536683	chr21	+	37536133	37536728	True	NM_017438,NM_005128	chr21,chr21	-,+	SETD4,DOPEY2	-103317,110
chr10:28035862-28036087	chr10	+	28036010	28036136	True	NM_021252,NM_173576	chr10,chr10	+,-	RAB18,MKX	-242812,-1232
chr2:105758416-105760009	chr2	+	105758507	105759858	True	NM_001142621,NM_007227	chr2,chr2	-,+	TGFBRAP1,GPR45	186341,98341
chr16:84735753-84736521	chr16	+	84735997	84736232	True	NM_005153,NM_021149	chr16,chr16	+,-	USP10,COTL1	-2506,-84328
chr17:28438336-28439226	chr17	+	28438446	28439105	True	NR_036149,NR_029945,NM_032141	chr17,chr17,chr17	-,+,+	MIR3184,MIR423,CCDC55	5123,4991,4728
chr8:39776034-39777213	chr8	+	39776320	39777073	True	NM_001464,NM_002164	chr8,chr8	-,+	ADAM2,IDO1	-80541,-5052
chr1:38021716-38022382	chr1	+	38021800	38022359	True	NM_024700,NM_003462	chr1,chr1	-,+	SNIP1,DNALI1	-1897,160
chr4:174315649-174316626	chr4	+	174316236	174316656	True	NM_007281,NM_003864	chr4,chr4	-,+	SCRG1,SAP30	4011,-24200
chr15:75042916-75043537	chr15	+	75042999	75043576	True	NM_000499,NM_000761	chr15,chr15	-,+	CYP1A1,CYP1A2	-25122,-1866
chr2:10261457-10262367	chr2	+	10261468	10262122	True	NM_001034,NM_001165931,NM_001037160	chr2,chr2,chr2	+,+,-	RRM2,RRM2,CYS1	740,572,-40930
chr12:114847596-114847908	chr12	+	114847640	114847921	True	NM_181486,NM_080718,NM_000192,NM_080717,NM_138432	chr12,chr12,chr12,chr12,chr12	-,-,-,-,+	TBX5,TBX5,TBX5,TBX5,SDSL	-3751,-5937,-1393,-1393,-987475
chr4:3956446-3956910	chr4	+	3956450	3956770	True	NM_000683,NR_024253	chr4,chr4	+,-	ADRA2C,LOC348926	-188205,428
chr1:27216784-27217095	chr1	+	27216914	27217028	True	NM_018066,NM_022078,NM_006142	chr1,chr1,chr1	-,-,+	GPN2,GPATCH3,SFN	-45,9984,-27337
chr14:68061708-68062565	chr14	+	68062008	68062596	True	NM_001172,NM_004569	chr14,chr14	+,-	ARG2,PIGH	23982,4471
chr9:131683293-131683736	chr9	+	131683325	131683387	True	NM_174933,NM_001100877,NM_001100876,NM_014908	chr9,chr9,chr9,chr9	+,+,+,-	PHYHD1,PHYHD1,PHYHD1,DOLK	-202,1174,-202,26675
chr1:917837-918110	chr1	+	917992	918064	True	NR_027693,NM_032129	chr1,chr1	-,+	C1orf170,PLEKHN1	-519,-16166
chr17:40192892-40193110	chr17	+	40192948	40193144	True	NM_017595,NR_029431	chr17,chr17	+,-	NKIRAS2,DNAJC7	-20912,-23233
chrX:49158359-49158568	chrX	+	49158359	49158513	True	NM_001098413,NM_014009	chrX,chrX	+,-	GAGE10,FOXP3	1611,-37071
chr11:55750034-55752026	chr11	+	55750346	55751964	True	NM_001001921,NR_027688	chr11,chr11	+,-	OR5AS1,OR7E5P	45930,1974
chr12:112727571-112728046	chr12	+	112727763	112728001	True	NM_002834,NM_001109662	chr12,chr12	+,-	PTPN11,C12orf51	128534,91945
chr21:31312331-31312732	chr21	+	31312506	31312712	True	NM_175611,NR_027021,NM_000830	chr21,chr21,chr21	-,+,-	GRIK1,GRIK1-AS1,GRIK1	-224,-192063,-224
chr7:153754960-153755844	chr7	+	153755700	153755796	True	NM_130797,NM_007349	chr7,chr7	+,-	DPP6,PAXIP1	-5974,1038936
chr11:8954542-8955876	chr11	+	8954935	8955867	True	NM_020643,NM_020646,NM_182901	chr11,chr11,chr11	-,-,+	C11orf16,ASCL3,C11orf17	-382,8763,-22185
chr11:63605776-63606161	chr11	+	63605814	63606156	True	NM_001039469,NM_001163296,NM_004954,NM_001144936,NM_001163297	chr11,chr11,chr11,chr11,chr11	+,+,+,-,+	MARK2,MARK2,MARK2,C11orf95,MARK2	243,243,243,-69701,243
chr1:150551947-150552200	chr1	+	150551958	150552130	True	NM_182763,NM_021960,NM_001197320,NR_036211	chr1,chr1,chr1,chr1	-,-,-,+	MCL1,MCL1,MCL1,MIR4257	134,134,134,-27604
chr4:39976753-39977235	chr4	+	39976852	39977244	True	NM_001100399,NM_001100400,NM_018177	chr4,chr4,chr4	-,-,+	PDS5A,PDS5A,N4BP2	2382,2382,81279
chr12:107976675-107978482	chr12	+	107976722	107978430	True	NM_012406,NM_001017523	chr12,chr12	-,+	PRDM4,BTBD11	176534,-2145
chr11:101791523-101792986	chr11	+	101791853	101792900	True	NM_020802,NM_178127	chr11,chr11	+,-	KIAA1377,ANGPTL5	-6168,-4600
chr9:125333917-125334319	chr9	+	125334005	125334162	True	NM_001004454,NM_001004457	chr9,chr9	-,+	OR1L8,OR1N2	-3249,-18607
chr13:32426210-32426982	chr13	+	32426352	32426849	True	NR_027062,NM_001136571	chr13,chr13	+,-	EEF1DP3,ZAR1L	-5483,459293
chr19:40932833-40933280	chr19	+	40933148	40933243	True	NM_020971,NM_013376	chr19,chr19	+,-	SPTBN4,SERTAD1	39882,-1216
chrX:55479272-55480215	chrX	+	55479341	55480035	True	NM_014061,NM_201286	chrX,chrX	+,-	MAGEH1,USP51	-855,35654
chrX:102582463-102584422	chrX	+	102582565	102584384	True	NM_152278,NM_032621	chrX,chrX	+,-	TCEAL7,BEX2	729,-16591
chr20:12989892-12990714	chr20	+	12989926	12990750	True	NM_018327,NM_017714	chr20,chr20	+,-	SPTLC3,TASP1	-350,628883
chr2:114412877-114413763	chr2	+	114413101	114413667	True	NR_024531,NM_013412	chr2,chr2	-,+	RPL23AP7,RABL2A	-28386,-28352
chr7:10980226-10980748	chr7	+	10980241	10980774	True	NM_002489,NM_014660	chr7,chr7	-,+	NDUFA4,PHF14	-428,32724
chr2:242627101-242627405	chr2	+	242627251	242627399	True	NM_012145,NR_033255,NM_001165031,NM_032329	chr2,chr2,chr2,chr2	-,-,-,+	DTYMK,DTYMK,DTYMK,ING5	-868,-868,-868,14056
chr17:73840059-73840303	chr17	+	73840073	73840135	True	NM_199242,NM_001080419	chr17,chr17	-,+	UNC13D,UNK	713,-59443
chr16:71607573-71608406	chr16	+	71607878	71608088	True	NM_000353,NM_001166395	chr16,chr16	-,+	TAT,CHST4	2966,-47775
chr5:140236362-140237826	chr5	+	140236392	140237499	True	NM_014005,NM_031860,NM_002109,NM_031859,NM_018901,NM_031857	chr5,chr5,chr5,chr5,chr5,chr5	+,+,-,+,+,+	PCDHA9,PCDHA10,HARS,PCDHA10,PCDHA10,PCDHA9	-9094,-817,-165421,-817,-817,-9094
chr19:45910524-45912279	chr19	+	45910607	45912074	True	NM_001142502,NM_012099,NM_006663	chr19,chr19,chr19	-,+,-	PPP1R13L,CD3EAP,PPP1R13L	-1000,-1193,-2295
chr12:50356138-50356927	chr12	+	50356480	50356898	True	NM_001652,NM_001651,NR_026948	chr12,chr12,chr12	+,+,-	AQP6,AQP5,LOC283332	9721,-1252,-50834
chr20:3216469-3217089	chr20	+	3216468	3216985	True	NM_001174090,NM_001174089,NM_032034,NM_181493	chr20,chr20,chr20,chr20	-,-,-,+	SLC4A11,SLC4A11,SLC4A11,ITPA	1900,2952,1438,-26463
chr11:123399393-123401179	chr11	+	123399484	123400885	True	NM_020716,NM_001040151	chr11,chr11	+,-	GRAMD1B,SCN3B	-3009,124481
chr11:65344491-65344984	chr11	+	65344626	65345026	True	NM_001099409,NM_006396,NM_152832,NM_005714,NM_001098785,NM_001098784	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,-,+,+	EHBP1L1,SSSCA1,FAM89B,KCNK7,FAM89B,FAM89B	-1168,-6734,-4857,18491,-4857,-4857
chr20:21686323-21686560	chr20	+	21686322	21686544	True	NM_002509,NM_006192	chr20,chr20	-,+	NKX2-2,PAX1	-191658,-76
chr17:62503516-62504230	chr17	+	62503568	62504247	True	NM_138363,NM_004396	chr17,chr17	+,-	CCDC45,DDX5	-461,-1084
chr9:44991240-44992109	chr9	+	44991499	44991951	True	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-1315,-1360769
chr9:44991240-44992109	chr9	-	67792615	67792921	False	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	1319,133839
chr9:44991240-44992109	chr9	+	45728290	45728596	False	NM_001145196,NR_024060	chr9,chr9	-,+	FAM75A6,FAM27A	-2097560,-1313
chr12:128059621-128060992	chr12	+	128060084	128060913	True	NR_033970,NR_033987	chr12,chr12	-,+	LOC440117,FLJ37505	-700848,305248
chr5:172089731-172090071	chr5	+	172089808	172089912	True	NM_001142651,NM_004417	chr5,chr5	+,-	NEURL1B,DUSP1	-21583,108341
chr20:42816149-42816482	chr20	+	42816303	42816457	True	NM_024034,NM_175913,NM_020433	chr20,chr20,chr20	+,-,-	GDAP1L1,JPH2,JPH2	59450,-85,-85
chr6:24629665-24630134	chr6	+	24629767	24630111	True	NM_001168375,NM_001160094	chr6,chr6	-,+	KIAA0319,ACOT13	16188,37151
chr12:54401140-54402724	chr12	+	54401356	54402722	True	NM_006897,NM_022658,NR_003084,NM_014620,NR_003716,NM_153693	chr12,chr12,chr12,chr12,chr12,chr12	+,+,+,+,-,+	HOXC9,HOXC8,HOXC5,HOXC4,HOTAIR,HOXC6	-7530,167,7919,7919,-38841,7919
chr9:138436530-138436981	chr9	+	138436671	138436919	True	NM_014582,NM_144654	chr9,chr9	+,-	OBP2A,C9orf116	1065,-44910
chr13:54908995-54909964	chr13	+	54909051	54909767	True	NR_031628,NM_006418	chr13,chr13	-,+	MIR1297,OLFM4	-22868,-1306226
chr15:43397738-43398099	chr15	+	43397758	43398026	True	NM_024956,NM_174916	chr15,chr15	+,-	TMEM62,UBR1	27695,310
chr12:10528566-10529506	chr12	+	10528609	10529140	True	NM_007360,NM_007334	chr12,chr12	-,+	KLRK1,KLRD1	13574,-68258
chr6:139604635-139605386	chr6	+	139604730	139605346	True	NM_153235,NM_016217	chr6,chr6	-,+	TXLNB,HECA	7914,-148546
chr16:48672043-48672913	chr16	+	48672235	48672930	True	NM_153029,NM_031490	chr16,chr16	-,+	N4BP1,LONP2	-28115,-394075
chr19:44617847-44618102	chr19	+	44617886	44618025	True	NM_013362,NR_033341	chr19,chr19	+,-	ZNF225,LOC100379224	-389,-550
chr5:38578399-38578744	chr5	+	38578589	38578654	True	NM_002310,NM_182801	chr5,chr5	-,+	LIFR,EGFLAM	16908,-133009
chr16:3625807-3626754	chr16	+	3625837	3626649	True	NM_024793,NM_178844	chr16,chr16	+,-	CLUAP1,NLRC3	-65994,793
chr5:137608048-137609918	chr5	+	137608381	137609857	True	NM_001496,NM_001135647	chr5,chr5	-,+	GFRA3,FAM53C	446,63366
chr1:94366445-94367824	chr1	+	94366498	94367565	True	NR_030621,NM_002061	chr1,chr1	+,-	MIR760,GCLM	-54164,7504
chrX:11683208-11683455	chrX	+	11683309	11683503	True	NM_078628,NM_013427,NM_006125	chrX,chrX,chrX	+,-,-	MSL3,ARHGAP6,ARHGAP6	92774,368,368
chr2:183631524-183631929	chr2	+	183631609	183631977	True	NM_018981,NM_001463	chr2,chr2	+,-	DNAJC10,FRZB	-50661,99571
chr12:5281187-5282903	chr12	+	5281542	5282514	True	NM_006422,NM_002234	chr12,chr12	-,+	AKAP3,KCNA5	-527199,-128508
chr5:40907603-40909530	chr5	+	40907802	40909486	True	NM_000587,NM_000997	chr5,chr5	+,-	C7,RPL37	112,-72415
chr12:8333311-8333643	chr12	+	8333623	8333687	True	NM_001004328,NR_026788,NR_036440	chr12,chr12,chr12	+,+,-	ZNF705A,FAM66C,POU5F1P3	-8524,-869,-46175
chr17:30770121-30770375	chr17	+	30770249	30770423	True	NM_002815,NM_022344	chr17,chr17	+,-	PSMD11,C17orf75	1078,-101060
chr5:134242052-134242477	chr5	+	134242173	134242519	True	NM_032151,NM_002653	chr5,chr5	+,-	PCBD2,PITX1	-1414,127495
chr20:25129254-25129602	chr20	+	25129286	25129570	True	NR_027092,NR_027093,NR_027091,NM_001114089	chr20,chr20,chr20,chr20	-,-,-,+	LOC284798,LOC284798,LOC284798,ENTPD6	-3,-657,44,46768
chr17:78162704-78163173	chr17	+	78162857	78163213	True	NM_000199,NM_052819	chr17,chr17	-,+	SGSH,CARD14	31036,-1309
chr12:7014047-7014492	chr12	+	7014047	7014399	True	NM_032641,NM_201650,NM_006992,NM_001135217,NM_001975	chr12,chr12,chr12,chr12,chr12	-,+,+,+,+	SPSB2,LRRC23,LRRC23,LRRC23,ENO2	-31526,-201,-201,-201,9214
chr5:34193031-34193566	chr5	+	34193161	34193237	True	NM_016568,NR_037951	chr5,chr5	+,-	RXFP3,C1QTNF3-AMACR	-256721,-68528
chr14:92506087-92506363	chr14	+	92506094	92506410	True	NM_004239,NM_017437	chr14,chr14	-,+	TRIP11,CPSF2	43,81887
chr2:100752769-100754673	chr2	+	100753074	100754706	True	NM_002285,NM_001011717	chr2,chr2	-,+	AFF3,NMS	4381,332237
chr2:210649491-210650859	chr2	+	210649624	210650747	True	NM_152519,NM_182587	chr2,chr2	-,+	C2orf67,UNC80	385363,-12958
chr3:46783697-46784315	chr3	+	46783744	46784324	True	NM_001205271,NM_199183,NM_147196	chr3,chr3,chr3	-,-,+	PRSS46,PRSS45,TMIE	-5823,1971,-40972
chr8:125463435-125463639	chr8	+	125463438	125463678	True	NM_017956,NM_194291	chr8,chr8	+,-	TRMT12,TMEM65	-441,-78498
chr10:118427722-118428430	chr10	+	118427742	118428312	True	NM_005396,NM_144661	chr10,chr10	+,-	PNLIPRP2,C10orf82	-47328,1219
chr17:56357010-56357307	chr17	+	56357181	56357341	True	NR_027647,NM_000250	chr17,chr17	+,-	LPO,MPO	-41445,1005
chr4:7194907-7195265	chr4	+	7195225	7195299	True	NM_020777,NR_027441	chr4,chr4	+,-	SORCS2,FLJ36777	-902,-90122
chr20:25992483-25994283	chr20	+	25993164	25993304	True	NR_004846,NR_003678	chr20,chr20	+,-	LOC100134868,C20orf191	-2781,101423
chr20:25992483-25994283	chr20	-	25823869	25824009	False	NR_004846,NR_026714	chr20,chr20	+,-	LOC100134868,FAM182B	166425,-41942
chr4:49289550-49290013	chr4	+	49289559	49289896	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-301345,-380744
chr22:24323646-24324014	chr22	+	24323967	24324047	True	NM_001355,NM_000854,NM_001084392	chr22,chr22,chr22	-,+,-	DDT,GSTT2,DDT	-1948,-1704,-7287
chr4:128646316-128648203	chr4	+	128646496	128648222	True	NM_152778,NM_031291	chr4,chr4	-,+	MFSD8,SLC25A31	238968,3332
chr2:179343333-179344909	chr2	+	179343445	179344634	True	NM_019091,NM_001135212,NM_181342	chr2,chr2,chr2	+,-,-	PLEKHA3,FKBP7,FKBP7	564,-90,-90
chr3:139393684-139395471	chr3	+	139393805	139395243	True	NM_001200047,NM_178177,NM_022131	chr3,chr3,chr3	-,-,+	NMNAT3,NMNAT3,CLSTN2	1692,1692,258783
chr6:5245550-5247272	chr6	+	5245663	5247236	True	NM_006567,NM_001164841	chr6,chr6	+,-	FARS2,LYRM4	14347,13988
chr3:193952987-193954932	chr3	+	193953062	193954946	True	NR_024480,NM_005524	chr3,chr3	-,+	LOC100131551,HES1	75705,-99186
chr8:30514297-30514961	chr8	+	30514380	30514909	True	NM_002095,NM_005671	chr8,chr8	-,+	GTF2E2,UBXN8	879,86780
chrX:100663535-100663891	chrX	+	100663553	100663928	True	NM_001032393,NM_019597,NM_000169,NR_028407	chrX,chrX,chrX,chrX	+,+,-,+	HNRNPH2,HNRNPH2,GLA,ARMCX4	-483,-483,-552,9337
chrX:64893161-64893406	chrX	+	64893195	64893310	True	NM_002444,NR_033742	chrX,chrX	+,-	MSN,FKSG43	-5742,-120894
chr1:41931202-41932405	chr1	+	41931266	41932440	True	NM_001956,NR_037868	chr1,chr1	-,+	EDN2,LOC100507178	17954,-451055
chr1:11723172-11723834	chr1	+	11723412	11723668	True	NM_001014765,NM_012168,NM_018438,NM_033182,NM_183412,NM_183413	chr1,chr1,chr1,chr1,chr1,chr1	+,-,+,+,+,+	FBXO44,FBXO2,FBXO6,FBXO44,FBXO44,FBXO44	-8562,-8524,481,-8562,-9044,-8562
chr5:34655887-34656174	chr5	+	34655968	34656158	True	NM_001145520,NR_026591,NM_001145522,NM_015577	chr5,chr5,chr5,chr5	+,-,+,+	RAI14,RAD1,RAI14,RAI14	437,259623,274,274
chr18:19178635-19179221	chr18	+	19178739	19178977	True	NM_006938,NM_052911	chr18,chr18	+,-	SNRPD1,ESCO1	13282,1774
chr16:20085768-20086193	chr16	+	20085781	20086129	True	NM_001002911,NM_017888	chr16,chr16	-,+	GPR139,ACSM5	-681,334726
chr10:103882853-103883584	chr10	+	103882853	103883241	True	NM_001113407,NM_015062,NM_003893	chr10,chr10,chr10	-,+,-	LDB1,PPRC1,LDB1	-2643,9545,-8130
chr17:79283104-79283364	chr17	+	79283169	79283306	True	NM_178519,NR_038080,NM_001086521	chr17,chr17,chr17	-,-,+	C17orf55,C17orf55,C17orf89	-121,-121,-70109
chr2:73468088-73469027	chr2	+	73468340	73468828	True	NM_001009570,NM_006429,NM_001166284,NM_001166285,NR_029403,NR_029402,NM_032319	chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,+,+,-	CCT7,CCT7,CCT7,CCT7,CCT7,CCT7,C2orf7	-7031,-7031,-7031,-7031,-7031,-7031,-7984
chr11:65266219-65266460	chr11	+	65266285	65266500	True	NR_002819,NM_001130144	chr11,chr11	+,-	MALAT1,LTBP3	-1115,59249
chr14:93213756-93214805	chr14	+	93213945	93214735	True	NM_005606,NM_005113,NM_001008530	chr14,chr14,chr14	-,+,-	LGMN,GOLGA5,LGMN	362,45914,362
chr19:3362196-3363428	chr19	+	3362244	3363124	True	NM_005597,NM_001136503,NM_205843	chr19,chr19,chr19	+,-,+	NFIC,C19orf77,NFIC	3448,117468,-2679
chr8:145162788-145163049	chr8	+	145162787	145163009	True	NM_030974,NR_024207,NM_032272	chr8,chr8,chr8	-,+,+	SHARPIN,KIAA1875,MAF1	-3647,-209,-3533
chr4:141177754-141179208	chr4	+	141177757	141178975	True	NM_018717,NM_032547	chr4,chr4	-,+	MAML3,SCOC	-102524,-68
chr13:25085219-25086580	chr13	+	25085287	25086430	True	NM_006437,NR_002815	chr13,chr13	-,+	PARP4,LOC374491	569,67915
chr17:1644789-1645014	chr17	+	1644804	1644884	True	NM_001165921,NM_001165920,NM_000934,NR_028505	chr17,chr17,chr17,chr17	+,+,+,-	SERPINF2,SERPINF2,SERPINF2,C17orf91	1245,1435,1245,-25238
chrX:80466010-80466803	chrX	+	80466163	80466608	True	NM_003022,NM_030763	chrX,chrX	+,-	SH3BGRL,HMGN5	-8919,-8722
chr9:114389700-114390744	chr9	+	114389765	114390373	True	NM_004125,NM_001015882,NR_037148,NR_034087	chr9,chr9,chr9,chr9	+,+,+,-	DNAJC25-GNG10,DNAJC25,DNAJC25,C9orf29	3258,3258,3258,-13932
chr2:234672924-234674595	chr2	+	234672977	234674471	True	NR_037695,NR_037694,NR_037696,NM_000463	chr2,chr2,chr2,chr2	-,-,-,+	LOC100286922,LOC100286922,LOC100286922,UGT1A1	-8986,-8986,-8986,-4109
chr1:6684423-6685070	chr1	+	6684644	6684978	True	NM_014851,NM_001195752,NM_001195753,NM_138350	chr1,chr1,chr1,chr1	-,+,+,+	KLHL21,THAP3,THAP3,THAP3	-21715,231,14,231
chr1:33424239-33425358	chr1	+	33424463	33425127	True	NM_002143,NM_001127361,NM_153341	chr1,chr1,chr1	+,-,-	HPCA,RNF19B,RNF19B	-72424,5219,5219
chr16:31098611-31098823	chr16	+	31098617	31098794	True	NM_024006,NM_001039503,NM_014699,NM_206824	chr16,chr16,chr16,chr16	-,-,+,-	VKORC1,PRSS53,ZNF646,VKORC1	7533,1387,-12925,7533
chr17:49227088-49227922	chr17	+	49227338	49227884	True	NM_001018136,NM_198175,NM_000269,NR_037149,NM_003971	chr17,chr17,chr17,chr17,chr17	+,+,+,+,-	NME1-NME2,NME1,NME1,NME1-NME2,SPAG9	3012,3035,3035,3012,-29112
chr8:49647985-49648256	chr8	+	49648004	49648292	True	NM_001007176,NR_024605,NM_024593,NM_001142857	chr8,chr8,chr8,chr8	+,-,-,-	C8orf22,EFCAB1,EFCAB1,EFCAB1	336610,-134,-134,-134
chr11:58032931-58034649	chr11	+	58033033	58034394	True	NM_001004458,NM_207374	chr11,chr11	+,-	OR1S1,OR10W1	-50867,1388
chr16:2299959-2300525	chr16	+	2300040	2300342	True	NM_001374,NM_001178029,NM_001919	chr16,chr16,chr16	+,-,-	DNASE1L2,ECI1,ECI1	-13635,1310,1310
chr8:144451959-144452340	chr8	+	144452001	144452363	True	NR_026785,NM_052924	chr8,chr8	-,+	C8orf51,RHPN1	-1196,-1027
chr9:35811282-35811740	chr9	+	35811357	35811737	True	NM_016446,NM_001039592,NM_032593,NM_172312	chr9,chr9,chr9,chr9	+,-,-,-	TMEM8B,SPAG8,HINT2,SPAG8	17484,572,3355,572
chr1:45238280-45240119	chr1	+	45238279	45239820	True	NR_001456,NR_001457,NM_153274,NR_000024,NR_000015,NM_001012	chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,+,+,+	SNORD38A,SNORD38B,BEST4,SNORD46,SNORD55,RPS8	3693,4241,13667,2343,1716,1425
chr17:42383988-42385095	chr17	+	42384375	42384956	True	NM_001144826,NM_001143780,NM_001144825,NM_006695	chr17,chr17,chr17,chr17	+,-,+,+	RUNDC3A,SLC25A39,RUNDC3A,RUNDC3A	970,17311,970,970
chr17:43663765-43664124	chr17_ctg5_hap1	-	1204266	1204316	False	NR_026901,NR_037772	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LOC644172,CRHR1	-15878,-33813
chr17:43663765-43664124	chr17_ctg5_hap1	+	528614	528991	False	NM_001193465,NR_034172	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	KIAA1267,LOC644246	34506,66766
chr17:43663765-43664124	chr17	+	43663765	43663991	True	NR_026901,NR_037772	chr17,chr17	-,+	LOC644172,CRHR1	15807,33718
chr17:43663765-43664124	chr17	-	44337277	44337443	False	NM_001193465,NM_014834	chr17,chr17	-,+	KIAA1267,LRRC37A	-34537,35053
chrX:12892360-12894236	chrX	+	12892539	12893441	True	NM_016562,NR_030727	chrX,chrX	+,-	TLR7,LOC349408	-7396,68030
chr2:113345325-113345586	chr2	+	113345325	113345575	True	NM_032309,NR_033871	chr2,chr2	+,-	CHCHD5,FLJ42351	-3341,56232
chr14:24614635-24615276	chr14	+	24614772	24615279	True	NM_017999,NM_016049,NM_006263,NM_176783,NM_002818	chr14,chr14,chr14,chr14,chr14	+,-,+,+,-	RNF31,FAM158A,PSME1,PSME1,PSME2	1379,-3975,-9445,-9445,633
chr20:44651191-44651836	chr20	+	44651216	44651818	True	NM_001134771,NM_022095,NM_020708	chr20,chr20,chr20	+,-,+	SLC12A5,ZNF335,SLC12A5	-938,-50383,6002
chr22:16289425-16290162	chr22	+	16289646	16289925	True	NR_001591,NM_001136213	chr22,chr22	+,-	psiTPTE22,POTEH	792875,-1709
chr6:13707088-13707414	chr6	+	13707370	13707430	True	NM_005493,NM_016167	chr6,chr6	-,+	RANBP9,NOL7	4416,-91862
chr19:53896781-53897468	chr19	+	53896865	53897346	True	NM_001040185,NM_033341	chr19,chr19	+,-	ZNF765,BIRC8	1050,-101990
chr17:73255007-73256682	chr17	+	73255543	73256707	True	NM_015971,NM_001172703,NM_001172704,NM_138619,NR_033345,NM_014001	chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,-,-,-	MRPS7,GGA3,GGA3,GGA3,GGA3,GGA3	1041,1787,1787,1050,1050,1050
chr17:9696601-9697287	chr17	+	9696619	9697040	True	NM_001105571,NM_004246	chr17,chr17	-,+	DHRS7C,GLP2R	-2018,32340
chr19:57742516-57743562	chr19	+	57742649	57743542	True	NM_001012729,NM_001145078,NM_001023563,NM_001015878,NM_001015879,NM_003160	chr19,chr19,chr19,chr19,chr19,chr19	-,+,+,+,+,+	DUXA,ZNF805,ZNF805,AURKC,AURKC,AURKC	-63793,8510,8510,-272,-323,-323
chr19:6993888-6994684	chr19	+	6994044	6994731	True	NR_024075,NM_001136507	chr19,chr19	-,+	EMR4P,MBD3L5	-3187,35862
chr7:92830204-92832105	chr7	+	92830254	92832107	True	NM_024553,NM_198151	chr7,chr7	+,-	CCDC132,HEPACAM2	29545,16814
chr20:52790132-52790372	chr20	+	52790201	52790343	True	NM_002623,NM_001128915,NM_000782	chr20,chr20,chr20	+,-,-	PFDN4,CYP24A1,CYP24A1	34158,223,223
chr1:203022515-203022916	chr1	+	203022713	203022895	True	NM_015053,NM_002479	chr1,chr1	+,-	PPFIA4,MYOG	-2453,32532
chr2:44068323-44069235	chr2	+	44068376	44069087	True	NM_022436,NM_022437	chr2,chr2	-,+	ABCG5,ABCG8	-2418,-2335
chr17:46187030-46188465	chr17	+	46187267	46188499	True	NM_001127228,NM_013323,NM_006807,NM_152244	chr17,chr17,chr17,chr17	-,+,-,+	CBX1,SNX11,CBX1,SNX11	-8384,-2380,-8707,-2407
chr22:36597352-36597914	chr22	+	36597643	36597947	True	NM_030643,NM_001136540,NM_145660	chr22,chr22,chr22	-,+,-	APOL4,APOL1,APOL4	2982,51169,2982
chr2:180574833-180576361	chr2	+	180574873	180576383	True	NM_019091,NM_001113397	chr2,chr2	+,-	PLEKHA3,ZNF385B	-1229725,34436
chr5:178015209-178016223	chr5	+	178015351	178016223	True	NM_173465,NM_058230	chr5,chr5	-,+	COL23A1,ZNF354B	1383,270730
chr19:52548906-52549214	chr19	+	52548916	52548978	True	NM_024840,NM_014650	chr19,chr19	+,-	ZNF613,ZNF432	-118285,3145
chr1:113046791-113047138	chr1	+	113046815	113047161	True	NR_036210,NM_024494	chr1,chr1	-,+	MIR4256,WNT2B	-42360,4208
chr19:11373700-11374533	chr19	+	11373726	11374488	True	NM_020812,NM_018687	chr19,chr19	-,+	DOCK6,LOC55908	-569,-23490
chrX:19500220-19501230	chrX	+	19500529	19501113	True	NM_001173456,NM_001001671	chrX,chrX	+,-	PDHA1,MAP3K15	-138582,32316
chr15:37100696-37100939	chr15	+	37100706	37100884	True	NR_027320,NM_032499	chr15,chr15	-,+	CSNK1A1P1,C15orf41	9873,-167951
chr1:145515162-145515475	chr1	+	145515233	145515475	True	NR_002328,NM_003846,NM_001184795,NM_003637,NM_005105	chr1,chr1,chr1,chr1,chr1	-,+,+,+,+	GNRHR2,PEX11B,PEX11B,ITGA10,RBM8A	651,689,1084,9514,-7727
chr14:60558031-60558244	chr14	+	60558038	60558266	True	NM_022495,NM_016029	chr14,chr14	+,-	C14orf135,DHRS7	362,74001
chr19:35761385-35761687	chr19	+	35761414	35761482	True	NM_003367,NM_207291,NM_152481	chr19,chr19,chr19	+,+,-	USF2,USF2,FAM187B	-1569,-1569,-41786
chr11:62575112-62575340	chr11	+	62575146	62575377	True	NM_199337,NM_006362,NM_001081491	chr11,chr11,chr11	+,-,-	TMEM179B,NXF1,NXF1	-20335,-2182,-2182
chr6:28041376-28042014	chr6	+	28041449	28041960	True	NM_003447,NR_002936	chr6,chr6	+,-	ZNF165,LOC222699	6521,144808
chrY:21729249-21729537	chrY	+	21729286	21729578	True	NM_001005852,NR_033732	chrY,chrY	+,-	CYorf15A,BCORP1	-102,-64247
chr4:2854212-2855121	chr4	+	2854271	2855165	True	NM_014190,NM_176801,NM_001120,NM_014189,NM_001119	chr4,chr4,chr4,chr4,chr4	+,+,-,+,+	ADD1,ADD1,MFSD10,ADD1,ADD1	-8738,-8738,80851,-8738,-8738
chr1:16972075-16972628	chr1	+	16972315	16972651	True	NR_027504,NR_026752	chr1,chr1	+,-	MST1P2,CROCCP2	-297,-14914
chr19:641497-641818	chr19	+	641588	641842	True	NM_005035,NM_020637	chr19,chr19	-,+	POLRMT,FGF22	-8020,-1713
chr20:25776266-25776695	chr20	+	25776388	25776682	True	NR_004846,NR_027061,NR_026714	chr20,chr20,chr20	+,-,-	LOC100134868,FAM182B,FAM182B	213752,246,5295
chr20:25776266-25776695	chr20	-	26040494	26040788	False	NR_003678,NR_026713	chr20,chr20	-,+	C20orf191,FAM182A	53941,-5295
chr2:106681540-106681795	chr2	+	106681541	106681675	True	NM_025076,NM_032411	chr2,chr2	-,+	UXS1,C2orf40	129170,437
chr11:66204108-66204827	chr11	+	66204136	66204708	True	NM_170739,NM_170738,NM_178864,NM_016050	chr11,chr11,chr11,chr11	-,-,+,-	MRPL11,MRPL11,NPAS4,MRPL11	1652,1652,-15712,1652
chr1:156539401-156541155	chr1	+	156539615	156541173	True	NM_001105669,NM_178229	chr1,chr1	+,-	TTC24,IQGAP3	8345,1281
chr1:159915672-159915881	chr1	+	159915706	159915766	True	NM_001135050,NM_033438,NM_001146173,NM_020125,NM_001146172,NM_020789	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,-	IGSF9,SLAMF9,SLAMF9,SLAMF8,SLAMF9,IGSF9	-320,8328,8328,-119278,8328,-320
chr1:178508825-178509086	chr1	+	178508829	178508984	True	NR_033186,NM_004673	chr1,chr1	+,-	C1orf220,ANGPTL1	2946,331284
chr2:128783822-128784551	chr2	+	128783834	128784405	True	NM_024545,NM_020120,NM_001145928	chr2,chr2,chr2	-,+,-	SAP130,UGGT1,SAP130	515,64348,515
chr2:71126273-71126743	chr2	+	71126278	71126710	True	NM_015717,NM_012476	chr2,chr2	-,+	CD207,VAX2	-63325,1009
chr9:80851379-80851987	chr9	+	80851449	80851747	True	NM_001098802,NM_002072,NM_032171	chr9,chr9,chr9	+,-,+	CEP78,GNAQ,CEP78	-509,-205230,-509
chr17:39116642-39117304	chr17	+	39116662	39117059	True	NM_033061,NM_213656	chr17,chr17	+,-	KRTAP4-7,KRT39	123399,6140
chr7:99779290-99779812	chr7	+	99779686	99779800	True	NM_152742,NM_012447	chr7,chr7	-,+	GPC2,STAG3	-4696,-4207
chr12:133702914-133703641	chr12	+	133703075	133703201	True	NM_015394,NM_001191054	chr12,chr12	+,-	ZNF10,LOC647589	4012,109271
chr3:47848618-47848913	chr3	+	47848700	47848900	True	NM_003074,NM_014966,NM_138615	chr3,chr3,chr3	-,+,+	SMARCC1,DHX30,DHX30	-25295,-4361,-4361
chr11:96092563-96093457	chr11	+	96092608	96093269	True	NR_036125,NM_032427	chr11,chr11	+,-	MIR1260B,MAML2	-18067,-16264
chr16:86256668-86258069	chr16	+	86256773	86258085	True	NR_024406,NM_001451	chr16,chr16	-,+	LOC732275,FOXF1	121250,286047
chr1:40997424-40998204	chr1	+	40997506	40998190	True	NM_152373,NM_014747	chr1,chr1	+,-	ZNF684,RIMS3	-324,133185
chr5:173144175-173145201	chr5	+	173144266	173145249	True	NR_027109,NM_138369	chr5,chr5	+,-	LOC285593,BOD1	-137673,-100600
chr12:52282458-52283213	chr12	+	52282500	52283207	True	NM_182608,NM_001130015,NM_001013690	chr12,chr12,chr12	+,+,-	ANKRD33,ANKRD33,FIGNL2	-758,-758,-56799
chrX:134478963-134479471	chrX	+	134479033	134479515	True	NM_007131,NM_152695	chrX,chrX	-,+	ZNF75D,ZNF449	-49068,-388
chr5:68857096-68858363	chr5	+	68857395	68857871	True	NR_027439,NM_001042490,NM_001098728	chr5,chr5,chr5	-,+,+	LOC100272216,GTF2H2D,GTF2H2C	71207,-1378,-1401
chr5:68857096-68858363	chr5	+	69712542	69713020	False	NR_033417,NR_033968	chr5,chr5	+,-	GTF2H2B,LOC100049076	-1402,138180
chr5:68857096-68858363	chr5	-	70361677	70362155	False	NM_022877,NM_001515	chr5,chr5	+,-	SMN2,GTF2H2	-140960,1398
chr14:64760943-64761659	chr14	+	64760978	64761662	True	NM_182910,NM_001040275,NM_001437	chr14,chr14,chr14	+,-,-	SYNE2,ESR2,ESR2	-78357,-90,-90
chr5:95159456-95159824	chr5	+	95159595	95159752	True	NR_026936,NM_002064,NM_001118890	chr5,chr5,chr5	+,-,-	C5orf27,GLRX,GLRX	28183,-1018,-1018
chr3:107561608-107562894	chr3	+	107561923	107562804	True	NR_015414,NR_015394	chr3,chr3	-,+	LOC151658,LOC285205	34162,39247
chr10:68779067-68780691	chr10	+	68779365	68780713	True	NM_001127384,NM_178011	chr10,chr10	-,+	CTNNA3,LRRTM3	644755,-93626
chr19:55478528-55478772	chr19	+	55478528	55478589	True	NM_001174083,NM_001174082,NM_017852,NM_001174081,NM_206828	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	NLRP2,NLRP2,NLRP2,NLRP2,NLRP7	-871,-871,-871,-1930,-19655
chr6:154360863-154361400	chr6	+	154360877	154361360	True	NM_001130699,NM_001145283,NM_001145282,NM_001145285,NM_001145284,NM_001145286,NM_001008504,NM_001008505,NM_001008503,NM_000914	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,+,+,+,+,+,+,+,+,+	IPCEF1,OPRM1,OPRM1,OPRM1,OPRM1,OPRM1,OPRM1,OPRM1,OPRM1,OPRM1	289906,-485,-485,-485,-382,-485,-485,-485,-485,-485
chr1:109254529-109254807	chr1	+	109254548	109254831	True	NM_144584,NM_001144937	chr1,chr1	-,+	HENMT1,FNDC7	-50400,724
chr19:20151216-20151444	chr19	+	20151215	20151282	True	NM_033196,NM_007138,NM_001077349	chr19,chr19,chr19	-,+,-	ZNF682,ZNF90,ZNF682	-938,37520,-1151
chr7:27195201-27195643	chr7	+	27195363	27195631	True	NM_152739,NR_002795,NM_024014,NM_006896	chr7,chr7,chr7,chr7	-,+,-,-	HOXA9,HOXA11-AS1,HOXA6,HOXA7	9568,29395,-7995,715
chr10:38657544-38658141	chr10	+	38657552	38658156	True	NR_027269,NR_003086	chr10,chr10	-,+	SEPT7L,HSD17B7P2	33674,-12295
chr10:38657544-38658141	chr1	+	162773007	162773275	False	NM_178550,NM_016371	chr1,chr1	-,+	C1orf110,HSD17B7	65380,-12562
chrX:52840829-52841388	chrX	+	52841005	52841267	True	NM_130775,NM_001009616	chrX,chrX	+,-	XAGE5,SPANXN5	-40,-14617
chr1:17637042-17637446	chr1	+	17637124	17637184	True	NM_001136204,NM_012387	chr1,chr1	-,+	RCC2,PADI4	127923,-2487
chr14:24542243-24542522	chr14	+	24542308	24542552	True	NM_006032,NM_006177	chr14,chr14	+,-	CPNE6,NRL	-1603,11330
chr15:89783406-89783999	chr15	+	89783578	89783809	True	NM_001113378,NM_000326,NM_018193	chr15,chr15,chr15	+,-,+	FANCI,RLBP1,FANCI	3384,-18656,3384
chr22:18110188-18110442	chr22	+	18110194	18110324	True	NM_015367,NM_001039366,NM_001039367,NM_001696	chr22,chr22,chr22,chr22	+,-,-,-	BCL2L13,ATP6V1E1,ATP6V1E1,ATP6V1E1	11160,1314,1314,1314
chr11:17741965-17742339	chr11	+	17741981	17742370	True	NM_153676,NM_002478	chr11,chr11	-,+	USH1C,MYOD1	-176018,-922
chr12:324745-325502	chr12	+	324764	325190	True	NM_001122848,NM_015232,NM_003044,NM_001122847	chr12,chr12,chr12,chr12	-,+,-,-	SLC6A12,IQSEC3,SLC6A12,SLC6A12	-1393,-138273,-2272,-1930
chr10:28564197-28565050	chr10	+	28564207	28564952	True	NR_024557,NM_173496	chr10,chr10	+,-	WAC,MPP7	256474,6172
chr4:15342208-15343328	chr4	+	15342467	15343327	True	NM_001135170,NM_001193534	chr4,chr4	+,-	C1QTNF7,FBXL5	-959,313758
chr12:64843393-64844154	chr13	-	49838546	49839192	False	NM_030925,NR_036439	chr13,chr13	-,+	CAB39L,CDADC1	136608,-16915
chr12:64843393-64844154	chr12	+	64843616	64843912	True	NM_001170633,NM_013254	chr12,chr12	-,+	C12orf56,TBK1	-59271,1927
chr2:200332144-200332378	chr2	+	200332148	200332394	True	NM_015265,NM_001172509,NM_001172517,NR_026830	chr2,chr2,chr2,chr2	-,-,-,+	SATB2,SATB2,SATB2,FLJ32063	3645,-9329,-2317,426
chr5:171879651-171880050	chr5	+	171879655	171880072	True	NM_001017995,NM_001142651	chr5,chr5	-,+	SH3PXD2B,NEURL1B	1505,188203
chr4:110355394-110355595	chr4	+	110355469	110355613	True	NM_032518,NM_001042734,NM_006323	chr4,chr4,chr4	-,+,+	COL25A1,SEC24B,SEC24B	-131670,-549,-549
chr1:168264250-168265050	chr1	+	168264576	168264904	True	NR_026844,NM_005149	chr1,chr1	-,+	ANKRD36BP1,TBX19	-47908,-14349
chrX:282957-283578	chrY	+	233405	233457	False	NM_012227,NR_027232,NR_027231	chrY,chrY,chrY	-,+,+	GTPBP6,NCRNA00107,NCRNA00107	-52518,-2071,-2071
chrX:282957-283578	chrX	+	283405	283457	True	NM_012227,NR_027232,NR_027231	chrX,chrX,chrX	-,+,+	GTPBP6,NCRNA00107,NCRNA00107	-52518,-2071,-2071
chr2:61404933-61405191	chr2	+	61404981	61405171	True	NM_152392,NR_036496	chr2,chr2	+,-	AHSA2,LOC339803	-477,-32871
chr1:149804252-149805060	chr1	+	149804631	149805107	True	NM_001040874,NM_001034077,NM_003548,NM_001005464,NM_003516,NM_021059	chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,-,-,-	HIST2H2AA4,HIST2H4B,HIST2H4A,HIST2H3A,HIST2H2AA3,HIST2H3C	9261,-462,-462,7708,9261,7708
chr1:149804252-149805060	chr1	-	149831838	149832314	False	NM_001040874,NM_001034077,NM_003548,NR_036461,NM_001005464,NM_003516,NM_021059	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,-,+,+,+	HIST2H2AA4,HIST2H4B,HIST2H4A,HIST2H2BC,HIST2H3A,HIST2H2AA3,HIST2H3C	-9261,462,462,-9498,-7708,-9261,-7708
chr1:109418573-109419116	chr1	+	109418675	109418959	True	NM_013296,NM_152763	chr1,chr1	+,-	GPSM2,AKNAD1	643,-18959
chr5:178489211-178489448	chr5	+	178489256	178489480	True	NM_014594,NM_000843	chr5,chr5	+,-	ZNF354C,GRM6	-1700,-67132
chr20:16555753-16555985	chr20	+	16555779	16556009	True	NM_001199865,NM_001199866,NM_024704,NM_003092	chr20,chr20,chr20,chr20	-,-,-,+	KIF16B,KIF16B,KIF16B,SNRPB2	-1700,-1700,-1700,154599
chr6:10726184-10727730	chr6	+	10726243	10727347	True	NM_001165258,NR_026736,NM_016462	chr6,chr6,chr6	+,-,+	TMEM14C,C6orf52,TMEM14C	-3146,-31213,-3146
chr3:157159490-157160673	chr3	+	157159653	157160657	True	NM_002852,NM_001167917	chr3,chr3	+,-	PTX3,VEPH1	-5131,52688
chr3:122380548-122382055	chr3	+	122380593	122381948	True	NM_031458,NM_017554	chr3,chr3	-,+	PARP9,PARP14	-97070,17723
chr19:18385407-18385690	chr19	+	18385462	18385682	True	NM_025249,NR_036155,NM_005354,NM_001145304,NM_001145305	chr19,chr19,chr19,chr19,chr19	-,+,-,-,-	KIAA1683,MIR3188,JUND,KIAA1683,KIAA1683	-143,7204,6800,-143,-143
chr1:14032917-14034841	chr1	+	14032993	14034643	True	NM_015866,NM_001135610,NM_012231,NM_001010847	chr1,chr1,chr1,chr1	+,+,+,-	PRDM2,PRDM2,PRDM2,LRRC38	-1694,-6309,-1694,-192751
chr9:79374779-79375122	chr9	+	79374900	79375058	True	NR_015342,NM_015225	chr9,chr9	+,-	PCA3,PRUNE2	4295,145995
chr10:95400468-95401975	chr10	+	95400497	95401602	True	NM_006744,NM_006204	chr10,chr10	-,+	RBP4,PDE6C	-39504,-28209
chr22:51021924-51022513	chr22	+	51022027	51022451	True	NM_001145137,NM_001145136,NM_001145135,NM_001145134,NR_021492,NM_005198,NM_152245,NR_027928,NM_004377,NM_152246	chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,+,-,-,-,-,-	CPT1B,CPT1B,CPT1B,CPT1B,LOC100144603,CHKB,CPT1B,CHKB-CPT1B,CPT1B,CPT1B	-5521,-4931,-4931,-4931,-623,-599,-4931,-599,-5133,-5133
chr22:36633279-36635082	chr22	+	36633408	36635022	True	NM_030882,NM_145637,NM_001136540	chr22,chr22,chr22	-,-,+	APOL2,APOL2,APOL1	717,1028,14094
chr17:16749202-16749535	chr17	+	16749221	16749503	True	NR_026810,NR_029392	chr17,chr17	+,-	FAM106C,KRT16P2	-57215,-13074
chr17:16749202-16749535	chr17	+	39780853	39780907	False	NM_005801,NM_000422	chr17,chr17	+,-	EIF1,KRT17	64219,29
chr17:16749202-16749535	chr17	-	18329865	18330148	False	NM_148918,NR_001443	chr17,chr17	-,+	SHMT1,LOC339240	-63009,-4422
chr17:16749202-16749535	chr17	+	20420884	20421167	False	NM_001190790,NR_029393	chr17,chr17	+,-	CDRT15L2,KRT16P3	61869,-13073
chr6:18263612-18263880	chr6	+	18263615	18263871	True	NM_001134709,NM_153042,NM_003472	chr6,chr6,chr6	-,+,-	DEK,KDM1B,DEK	978,-108047,978
chr7:156110640-156111249	chr7	+	156110647	156111246	True	NR_026865,NR_024119	chr7,chr7	-,+	C7orf13,NCRNA00244	322153,221938
chr19:35737109-35738923	chr19	+	35737276	35738957	True	NM_205835,NM_015925,NM_152481,NM_205834	chr19,chr19,chr19,chr19	+,+,-,+	LSR,LSR,FAM187B,LSR	601,601,-17648,601
chr1:202974031-202975469	chr1	+	202974046	202975431	True	NR_036557,NM_138391,NM_001079809	chr1,chr1,chr1	-,+,+	LOC401980,TMEM183A,TMEM183B	1015,1102,1104
chr2:191988567-191988902	chr2	+	191988648	191988826	True	NM_001130158,NM_003151	chr2,chr2	+,-	MYO1B,STAT4	121280,27163
chr6:161417911-161418712	chr6	+	161417916	161418735	True	NM_006724,NR_024277,NM_005922	chr6,chr6,chr6	+,-,+	MAP3K4,NCRNA00241,MAP3K4	-5145,164330,-5145
chr22:38839032-38839432	chr22	+	38839044	38839448	True	NM_016657,NM_004981	chr22,chr22	+,-	KDELR3,KCNJ4	24634,635
chr7:155756886-155757305	chr7	+	155756893	155757249	True	NM_000193,NM_053043	chr7,chr7	-,+	SHH,RBM33	-151926,-319741
chr12:130529770-130530105	chr12	+	130529799	130530073	True	NR_024457,NM_007197	chr12,chr12	-,+	LOC100190940,FZD10	-2912,116930
chr19:13042368-13043137	chr19	+	13042497	13042846	True	NM_004461,NM_004343	chr19,chr19	-,+	FARSA,CALR	1773,6567
chr15:75250584-75250822	chr15	+	75250701	75250767	True	NM_017793,NM_001178111	chr15,chr15	-,+	RPP25,SCAMP5	-926,37108
chr6:27288555-27288895	chr6	+	27288555	27288716	True	NM_033482,NM_032030	chr6,chr6	-,+	POM121L2,FKSG83	-8544,3861
chr12:95869469-95870002	chr12	+	95869472	95869917	True	NM_006838,NM_001042403	chr12,chr12	+,-	METAP2,USP44	-1705,72754
chr18:13912941-13914356	chr18	+	13912953	13914121	True	NM_005913,NM_000529	chr18,chr18	+,-	MC5R,MC2R	-87461,1464
chr2:239758378-239758636	chr2	+	239758377	239758666	True	NR_034162,NM_057179	chr2,chr2	-,+	FLJ43879,TWIST2	89355,-1755
chr16:15528112-15528361	chr16	+	15528186	15528402	True	NM_033201,NM_001184998	chr16,chr16	+,-	C16orf45,KIAA0430	-64,208671
chr1:48291423-48292538	chr1	+	48291428	48292199	True	NM_001194986,NM_004474	chr1,chr1	-,+	LOC388630,FOXD2	170426,-389790
chr14:39736857-39737789	chr14	+	39736866	39737820	True	NM_005930,NM_203355,NM_203356,NM_177452,NM_203354	chr14,chr14,chr14,chr14,chr14	+,+,+,-,+	CTAGE5,CTAGE5,CTAGE5,TRAPPC6B,CTAGE5	-589,-589,-1415,-97232,-2441
chr14:68283746-68283996	chr14	+	68283746	68284044	True	NM_133510,NM_015346,NM_133509,NM_002877	chr14,chr14,chr14,chr14	+,-,+,+	RAD51L1,ZFYVE26,RAD51L1,RAD51L1	2451,-440,2451,2451
chr15:63499583-63499917	chr15	+	63499619	63499753	True	NM_016530,NM_015920	chr15,chr15	+,-	RAB8B,RPS27L	-17949,-49878
chr19:36210353-36210782	chr19	+	36210456	36210558	True	NM_014727,NM_024660,NM_014383	chr19,chr19,chr19	+,-,+	MLL4,IGFLR1,ZBTB32	-1586,22843,-6677
chr6:108485889-108486140	chr6	+	108485986	108486166	True	NM_003269,NM_014028	chr6,chr6	+,-	NR2E1,OSTM1	1048,-90045
chr6:99830931-99832909	chr6	+	99831110	99832586	True	NM_017421,NM_001195131	chr6,chr6	-,+	COQ3,LOC100130890	9547,136283
chr19:11408331-11408968	chr19	+	11408741	11408993	True	NM_020812,NM_012466	chr19,chr19	-,+	DOCK6,TSPAN16	-35584,-1974
chr10:97779214-97780647	chr10	+	97779246	97780234	True	NR_036113,NM_001159747	chr10,chr10	-,+	MIR3157,CC2D2B	43972,-19449
chr18:269319-270962	chr18	+	269475	270837	True	NM_005131,NM_005151	chr18,chr18	-,+	THOC1,USP14	-1416,-111043
chr15:31394290-31395161	chr15	+	31394303	31395003	True	NM_014967,NM_002420	chr15,chr15	+,-	FAN1,TRPM1	-198278,-379
chr3:111804341-111804907	chr3	+	111804343	111804907	True	NM_001171747,NM_024616,NM_001190259	chr3,chr3,chr3	+,+,-	C3orf52,C3orf52,GCET2	274,274,47295
chr21:45994406-45995751	chr21	+	45994942	45995726	True	NM_198694,NM_198687	chr21,chr21	-,+	KRTAP10-5,KRTAP10-4	4805,-1387
chr14:23906535-23907567	chr14	+	23906663	23907456	True	NM_000257,NM_001042635	chr14,chr14	-,+	MYH7,NGDN	-1793,31441
chr11:94731240-94731558	chr11	+	94731288	94731582	True	NM_016403,NM_018039	chr11,chr11	-,+	CWC15,KDM4D	-24512,-24494
chr10:89274863-89275744	chr10	+	89275350	89275540	True	NM_001178118,NR_024397	chr10,chr10	+,-	MINPP1,LOC728190	-7820,-173035
chr1:152321914-152323647	chr1	+	152322282	152323582	True	NM_178438,NM_001014342	chr1,chr1	+,-	LCE5A,FLG2	159737,8950
chr10:72166022-72167409	chr10	+	72166046	72166643	True	NM_018239,NM_004096	chr10,chr10	-,+	LRRC20,EIF4EBP2	-23664,-2245
chr15:79602223-79603225	chr15	+	79602353	79603153	True	NM_002891,NM_007364	chr15,chr15	-,+	RASGRF1,TMED3	-219138,337
chr3:85826496-85826982	chr3	+	85826694	85827026	True	NR_033860,NM_153184	chr3,chr3	-,+	LOC440970,CADM2	-907968,-51115
chr7:87855615-87856786	chr7	+	87855678	87856652	True	NM_021723,NM_003130,NM_198901	chr7,chr7,chr7	+,-,-	ADAM22,SRI,SRI	-292163,-6285,-72
chr13:107080299-107081934	chr13	+	107080526	107081974	True	NM_004093,NR_034119	chr13,chr13	-,+	EFNB2,LOC728192	105474,-51673
chr1:46908481-46908734	chr1	+	46908527	46908723	True	NM_001097611,NM_001441	chr1,chr1	-,+	KNCN,FAAH	108216,-48639
chr19:36101268-36102580	chr19	+	36101286	36102146	True	NM_000704,NM_015302	chr19,chr19	-,+	ATP4A,HAUS5	-46726,1499
chr11:118940992-118941932	chr11	+	118940998	118941977	True	NM_021729,NM_001130991	chr11,chr11	+,-	VPS11,HYOU1	-2556,-13073
chr2:47056280-47057868	chr2	+	47056677	47057690	True	NR_024452,NM_001171506	chr2,chr2	+,-	LOC100134259,MCFD2	-1725,85368
chr19:46546324-46547727	chr19	+	46546455	46547617	True	NR_030412,NM_001002923	chr19,chr19	+,-	MIR769,IGFL4	-24325,-2181
chr10:118765042-118765445	chr10	+	118765072	118765410	True	NM_018330,NM_181840,NM_001127211	chr10,chr10,chr10	-,+,-	KIAA1598,KCNK18,KIAA1598	16,191589,16
chr4:109576341-109577975	chr4	+	109576781	109577828	True	NR_026968,NM_021227	chr4,chr4	-,+	LOC285456,OSTC	-35168,-5098
chr15:63410377-63412266	chr15	+	63410666	63412168	True	NM_032857,NM_015920,NM_171846	chr15,chr15,chr15	+,-,+	LACTB,RPS27L,LACTB	1830,37623,1830
chr17:27525692-27526692	chr17	+	27526329	27526633	True	NM_203318,NM_005208	chr17,chr17	-,+	MYO18A,CRYBA1	-18922,47241
chr15:63892870-63893104	chr15	+	63892902	63893112	True	NR_034080,NM_203373	chr15,chr15	-,+	LOC100130855,FBXL22	-22,-3401
chr9:139138428-139138895	chr9	+	139138599	139138909	True	NM_015597,NM_181701	chr9,chr9	+,-	GPSM1,QSOX2	83022,-912
chrX:118741056-118741289	chrX	+	118741070	118741316	True	NM_001173487,NM_181777,NM_017544	chrX,chrX,chrX	-,+,-	NKRF,UBE2A,NKRF	-1224,-26825,-1224
chr8:124743182-124743901	chr8	+	124743310	124743819	True	NM_144963,NM_004306,NM_001003954	chr8,chr8,chr8	+,-,-	FAM91A1,ANXA13,ANXA13	37062,5885,5885
chr19:6427023-6427307	chr19	+	6427114	6427272	True	NM_139161,NM_003685,NM_173637	chr19,chr19,chr19	+,-,-	CRB3,KHSRP,SLC25A41	36987,-2292,6568
chr11:46956436-46957702	chr11	+	46956715	46957448	True	NM_024113,NM_001003677,NM_001003676,NM_001003678,NM_002334	chr11,chr11,chr11,chr11,chr11	+,+,+,+,-	C11orf49,C11orf49,C11orf49,C11orf49,LRP4	802,802,802,802,-16542
chr21:45554067-45554430	chr21	+	45554074	45554474	True	NM_198155,NM_004649,NM_015259	chr21,chr21,chr21	+,+,-	C21orf33,C21orf33,ICOSLG	-631,-631,106410
chr14:23482170-23483066	chr14	+	23482356	23482694	True	NM_001130706,NM_021944,NM_001130708,NM_001099780	chr14,chr14,chr14,chr14	-,-,-,+	C14orf93,C14orf93,C14orf93,PSMB11	-2996,-2996,-2996,28681
chr12:8234474-8234839	chr12	+	8234518	8234814	True	NM_004054,NM_015509,NR_024260	chr12,chr12,chr12	-,+,+	C3AR1,NECAP1,NECAP1	-15563,-8,-8
chr1:167935166-167935680	chr1	+	167935174	167935550	True	NM_018442,NM_015415	chr1,chr1	+,-	DCAF6,BRP44	-29434,-28867
chr6:110797567-110797814	chr6	+	110797600	110797824	True	NM_015891,NM_033125	chr6,chr6	+,-	CDC40,SLC22A16	-296027,70
chr1:10096095-10097176	chr1	+	10096157	10097032	True	NM_001105562,NM_032368,NM_006048	chr1,chr1,chr1	+,-,+	UBE4B,LZIC,UBE4B	-3175,-93331,-3175
chr13:74708704-74708985	chr13	+	74708837	74708931	True	NR_034024,NM_007249	chr13,chr13	+,-	LOC338864,KLF12	418048,-771
chr17:61522459-61522703	chr17	+	61522589	61522743	True	NM_001915,NM_001017916,NM_001017917,NM_000789	chr17,chr17,chr17,chr17	-,-,-,+	CYB561,CYB561,CYB561,ACE	1029,852,-4382,31678
chr3:182972772-182973323	chr3	+	182972786	182973370	True	NM_032047,NM_014398	chr3,chr3	+,-	B3GNT5,LAMP3	-1805,-92119
chr6:16762718-16762968	chr6	+	16762728	16763002	True	NM_001128164,NM_001190766,NM_000332	chr6,chr6,chr6	-,+,-	ATXN1,FLJ23152,ATXN1	-1007,339486,-1007
chr18:624518-624923	chr18	+	624519	624906	True	NM_199167,NM_001012716	chr18,chr18	+,-	CLUL1,C18orf56	-7871,33491
chr6:15039122-15040152	chr6	+	15039150	15040028	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	206498,623317
chr7:123577577-123578973	chr7	+	123577669	123578947	True	NM_001174046,NM_001136002	chr7,chr7	+,-	SPAM1,TMEM229A	-11821,94626
chr19:839589-839863	chr19	+	839655	839715	True	NM_002777,NM_024888	chr19,chr19	+,-	PRTN3,LPPR3	1269,-17703
chr10:88866055-88868030	chr10	+	88866055	88867488	True	NM_019054,NM_005271	chr10,chr10	+,-	FAM35A,GLUD1	-11153,-11279
chr22:43010727-43010943	chr22	+	43010832	43010982	True	NM_178136,NM_032311,NR_029422	chr22,chr22,chr22	-,-,+	POLDIP3,POLDIP3,RNU12	30,30,268
chr3:49595291-49596450	chr3	+	49595323	49596303	True	NM_032316,NM_003458	chr3,chr3	-,+	NICN1,BSN	-128566,-3466
chr10:7855510-7856996	chr10	+	7855612	7856734	True	NM_012311,NM_031923	chr10,chr10	-,+	KIN,TAF3	-25668,3938
chrX:53114172-53115834	chrX	+	53114411	53115455	True	NM_022117,NM_014138	chrX,chrX	+,-	TSPYL2,FAM156A	-2920,-128235
chr22:43257155-43258871	chr22	+	43257577	43258372	True	NM_001142293,NM_014570,NR_029422	chr22,chr22,chr22	-,-,+	ARFGAP3,ARFGAP3,RNU12	-4169,-4169,-246377
chr17:27182691-27183330	chr17	+	27182691	27183327	True	NR_029685,NR_029970,NM_005702	chr17,chr17,chr17	-,-,+	MIR144,MIR451,ERAL1	5359,5181,-709
chr9:96108903-96109143	chr9	+	96109030	96109180	True	NM_001098808,NM_014612	chr9,chr9	-,+	C9orf129,FAM120A	-334,104992
chr16:88880108-88880809	chr16	+	88880191	88880456	True	NM_000485,NM_001030018,NM_030928	chr16,chr16,chr16	-,-,+	APRT,APRT,CDT1	-1849,-1849,-10056
chr7:45028009-45028663	chr7	+	45028205	45028677	True	NR_002952,NR_003697,NM_033054,NR_030770	chr7,chr7,chr7,chr7	-,-,-,+	SNORA9,C7orf40,MYO1G,CCM2	-3096,-1946,-9501,10667
chr12:117628485-117630426	chr12	+	117628575	117630275	True	NM_153348,NM_033624,NM_015002	chr12,chr12,chr12	+,-,-	FBXW8,FBXO21,FBXO21	-279865,-275,-275
chr1:206945922-206947035	chr1	+	206946010	206946892	True	NM_153758,NM_000572	chr1,chr1	+,-	IL19,IL10	25322,-171
chr19:56634092-56635218	chr19	+	56634466	56635044	True	NM_001002836,NM_018337	chr19,chr19	-,+	ZNF787,ZNF444	-1817,17511
chr10:31600881-31602572	chr10	+	31601123	31602320	True	NM_001174093,NM_001174094,NM_001174095,NM_001174096,NM_030751,NR_024284,NM_001128128	chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,-,+	ZEB1,ZEB1,ZEB1,ZEB1,ZEB1,LOC220930,ZEB1	5780,7743,5780,5780,5780,5754,7743
chr6:44262825-44264398	chr6	+	44262874	44264334	True	NM_001137560,NM_182539	chr6,chr6	+,-	TMEM151B,TCTE1	-24445,1174
chrY:22737503-22738045	chrY	+	22737585	22738045	True	NM_004681,NR_001542	chrY,chrY	+,-	EIF1AY,TTTY10	-25,-56471
chr19:58607448-58608124	chr19	+	58607636	58608138	True	NM_001145543,NM_007134,NM_001145544,NM_023926	chr19,chr19,chr19,chr19	-,+,-,-	ZSCAN18,ZNF135,ZSCAN18,ZSCAN18	1642,-37080,1642,1642
chr19:36976518-36977914	chr19	+	36977061	36977723	True	NM_001145344,NM_001145345,NM_001145343,NR_036504,NM_032838	chr19,chr19,chr19,chr19,chr19	-,-,-,+,-	ZNF566,ZNF566,ZNF566,LOC728752,ZNF566	2800,2800,2800,2805,2674
chr2:233499021-233499264	chr2	+	233499020	233499264	True	NM_145702,NM_025202	chr2,chr2	-,+	TIGD1,EFHD1	-83794,-864
chr16:30934222-30934628	chr16	+	30934310	30934600	True	NM_001099784,NR_024348	chr16,chr16	+,-	FBXL19,FBXL19-AS1	1295,40
chrX:136114191-136115224	chrX	+	136114195	136115033	True	NM_054021,NM_000074	chrX,chrX	-,+	GPR101,CD40LG	-362,-383910
chr21:46960321-46960652	chr21	+	46960346	46960670	True	NM_130444,NM_194255,NM_001205206,NM_001205207	chr21,chr21,chr21,chr21	+,-,-,-	COL18A1,SLC19A1,SLC19A1,SLC19A1	-84973,1765,1765,-5804
chr17:44391057-44392815	chr17_ctg5_hap1	+	1466114	1466533	False	NR_002940,NM_016632	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LRRC37A4,ARL17A	14843,47416
chr17:44391057-44392815	chr17_ctg5_hap1	-	221064	221483	False	NM_001006607,NM_016632	chr17_ctg5_hap1,chr17_ctg5_hap1	-,+	LRRC37A2,ARL17A	19241,14648
chr17:44391057-44392815	chr17_ctg5_hap1	-	438999	439418	False	NM_001039083,NR_002940	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	ARL17B,LRRC37A4	-47453,-14884
chr17:44391057-44392815	chr17	+	44391668	44392095	True	NM_001103154,NM_014834	chr17,chr17	-,+	ARL17B,LRRC37A	47104,-19227
chr17:44391057-44392815	chr17	+	44609252	44609671	False	NM_001006607,NM_016632	chr17,chr17	+,-	LRRC37A2,ARL17A	-19232,47482
chr8:33422312-33423334	chr8	+	33422418	33423179	True	NM_024787,NM_032509	chr8,chr8	-,+	RNF122,MAK16	1515,-79785
chr2:143642960-143644459	chr2	+	143643029	143644377	True	NM_001199241,NM_018557,NM_001032998,NM_003937	chr2,chr2,chr2,chr2	+,-,+,+	KYNU,LRP1B,KYNU,KYNU	-7886,-753759,-7886,-7886
chr17:57233151-57234148	chr17	+	57233159	57233985	True	NM_182620,NR_029842,NM_018304,NM_001100595	chr17,chr17,chr17,chr17	-,-,+,-	SKA2,MIR301A,PRR11,SKA2	-359,-4577,-358,-359
chr3:48601900-48602237	chr3	+	48602090	48602152	True	NM_033629,NM_004567,NM_033199	chr3,chr3,chr3	+,-,-	TREX1,PFKFB4,UCN2	-94912,-7863,-889
chr3:141215993-141217812	chr3	+	141216278	141217767	True	NM_006506,NM_001178140	chr3,chr3	+,-	RASA2,TFDP2	-10416,501512
chr19:5975670-5976476	chr19	+	5975670	5976419	True	NM_080590,NM_007322,NM_003624,NM_007320	chr19,chr19,chr19,chr19	+,-,-,-	CAPS,RANBP3,RANBP3,RANBP3	-61529,1952,1952,1952
chr2:112895395-112895921	chr2	+	112895405	112895815	True	NM_001128165,NM_032494,NM_153214	chr2,chr2,chr2	+,-,+	FBLN7,ZC3H8,FBLN7	146,116899,146
chr9:123756187-123756580	chr9	+	123756224	123756390	True	NM_007018,NM_001735	chr9,chr9	+,-	CEP110,C5	94183,56222
chr19:58571862-58572214	chr19	+	58571876	58572048	True	NM_001164530,NM_001145543,NM_007134,NM_003436,NM_001164529,NM_001164527	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+	ZNF135,ZSCAN18,ZNF135,ZNF135,ZNF135,ZNF135	-1320,37732,-1320,-1320,-1320,-1320
chr3:141594577-141594793	chr3	+	141594577	141594839	True	NM_001679,NM_001178140	chr3,chr3	+,-	ATP1B3,TFDP2	630,124440
chr6:73332240-73332545	chr6	+	73332281	73332477	True	NM_019842,NM_001160132,NM_001160133,NM_001160130,NR_036244,NM_001160134	chr6,chr6,chr6,chr6,chr6,chr6	+,+,+,+,-,+	KCNQ5,KCNQ5,KCNQ5,KCNQ5,MIR4282,KCNQ5	-761,-761,-761,-761,345049,-761
chr19:4534315-4534570	chr19	+	4534315	4534396	True	NM_052972,NM_032631,NM_001013706	chr19,chr19,chr19	-,+,-	LRG1,HDGFRP2,PLIN5	5695,-62111,867
chr14:31517049-31518339	chr14	+	31517953	31518101	True	NM_014574,NM_001128126	chr14,chr14	-,+	STRN3,AP4S1	-22346,-23328
chr22:19929621-19930070	chr22	+	19929635	19930109	True	NM_006440,NM_001135161,NM_000754,NM_001135162	chr22,chr22,chr22,chr22	-,+,+,+	TXNRD2,COMT,COMT,COMT	-276,8350,-423,8935
chr17:61552073-61552866	chr17	+	61552181	61552889	True	NM_152830,NM_001915,NM_000789,NM_001178057	chr17,chr17,chr17,chr17	+,-,+,+	ACE,CYB561,ACE,ACE	9288,-28459,1532,9288
chr2:86087147-86088833	chr2	+	86087343	86088852	True	NM_032827,NM_001042437	chr2,chr2	+,-	ATOH8,ST3GAL5	-106486,5991
chr22:38506769-38507118	chr22	+	38506902	38507160	True	NM_012407,NM_025045	chr22,chr22	+,-	PICK1,BAIAP2L2	-53691,-226
chr4:93331308-93332947	chr4	+	93331309	93332400	True	NM_183049,NM_001510	chr4,chr4	-,+	TMSL3,GRID2	-1571040,-105810
chr15:28984739-28985083	chr15	+	28984738	28985092	True	NR_033351,NR_026589	chr15,chr15	-,+	GOLGA8F,WHAMML2	-206595,-2065
chr15:28984739-28985083	chr15	-	23206361	23206711	False	NR_024074,NR_003521	chr15,chr15	+,-	GOLGA8IP,WHAMML1	48530,1702
chr11:65478595-65478835	chr11	+	65478595	65478668	True	NM_182709,NM_006388,NM_182710,NM_032193	chr11,chr11,chr11,chr11	+,+,+,-	KAT5,KAT5,KAT5,RNASEH2C	820,820,820,9796
chr22:50523289-50523687	chr22	+	50523359	50523690	True	NM_139202,NM_018995,NM_015166,NM_001164105,NM_001164104	chr22,chr22,chr22,chr22,chr22	-,+,-,+,+	MLC1,MOV10L1,MLC1,MOV10L1,MOV10L1	141,4744,718,4994,4744
chr2:95830210-95830952	chr2	+	95830210	95830977	True	NM_021088,NM_001017396,NM_032788	chr2,chr2,chr2	+,+,-	ZNF2,ZNF2,ZNF514	205,205,-4947
chr10:69416479-69417459	chr10	+	69416613	69417218	True	NM_001127384,NM_012238	chr10,chr10	-,+	CTNNA3,SIRT1	8251,227208
chr22:50973130-50973803	chr22	+	50973223	50973299	True	NM_005138,NM_001953,NM_001169111,NM_001169110,NM_001113756,NM_001169109,NM_001113755,NM_001014440,NM_138433	chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,-,-,-,-,+	SCO2,TYMP,SCO2,SCO2,TYMP,SCO2,TYMP,ODF3B,KLHDC7B	-9189,-4709,-9190,-8649,-4965,-8355,-4709,-2215,13162
chr19:54874790-54875028	chr19	+	54874834	54875070	True	NM_002287,NM_021706,NM_001005367	chr19,chr19,chr19	-,-,+	LAIR1,LAIR1,TTYH1	1701,1701,51534
chr19:54874790-54875028	chr19	-	55016499	55016643	False	NM_145057,NM_021270,NM_002288	chr19,chr19,chr19	-,+,+	CDC42EP5,LAIR2,LAIR2	-32077,-2537,-2537
chr18:48716975-48717669	chr18	+	48716979	48717712	True	NM_005359,NM_016626	chr18,chr18	+,-	SMAD4,MEX3C	-160447,6402
chr3:50369182-50370145	chr3	+	50369241	50369933	True	NM_007275,NM_033158,NM_007022,NM_170712,NM_170713,NM_007182,NM_170714,NM_003773	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,+,-,-,-,-,-	TUSC2,HYAL2,CYB561D2,RASSF1,RASSF1,RASSF1,RASSF1,HYAL2	-3573,-8960,18363,5781,5012,8484,8484,-8960
chr2:114196409-114197552	chr2	+	114196417	114197219	True	NM_172003,NM_013992	chr2,chr2	+,-	CBWD2,PAX8	-1200,-159919
chr2:114196409-114197552	chr9	-	177694	178000	False	NM_001145356,NM_001145355,NM_203447,NM_018491	chr9,chr9,chr9,chr9	-,-,+,-	CBWD1,CBWD1,DOCK8,CBWD1	1125,1125,36864,1125
chr2:114196409-114197552	chr9	-	69261465	69261515	False	NM_001085457,NM_001098805	chr9,chr9	-,+	CBWD6,ANKRD20A4	1128,120465
chr2:114196409-114197552	chr9	-	70489045	70489096	False	NM_001024916,NM_201453	chr9,chr9	-,-	CBWD5,CBWD3	1126,1132
chr2:114196409-114197552	chr9	+	70857919	70857969	False	NR_015423,NM_201453	chr9,chr9	-,+	LOC572558,CBWD3	114838,-1131
chr15:76627921-76628383	chr15	+	76627920	76628429	True	NM_001127716,NM_145805	chr15,chr15	-,+	ETFA,ISL2	-24110,717
chr1:19967903-19969684	chr1	+	19967975	19969553	True	NM_001204085,NM_001204084,NM_181719,NM_005380,NM_182744,NM_001204086,NM_004930	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,+,+,+,-	NBL1,NBL1,TMCO4,NBL1,NBL1,NBL1,CAPZB	2312,654,156915,1253,169,2706,-155909
chr1:53686352-53687370	chr1	+	53686484	53687202	True	NM_000098,NM_017887	chr1,chr1	+,-	CPT2,C1orf123	-24434,-195
chr6:170860197-170861821	chr6	+	170860418	170861838	True	NM_001172085,NM_002793	chr6,chr6	+,-	TBP,PSMB1	1582,629
chr17:76183272-76183887	chr17	+	76183412	76183775	True	NM_001010982,NR_027083,NM_001145526,NM_003258	chr17,chr17,chr17,chr17	+,+,+,-	AFMID,AFMID,AFMID,TK1	-65,-65,-65,-127
chrX:70711995-70712346	chrX	+	70711999	70712307	True	NR_002226,NM_181672	chrX,chrX	-,+	INGX,OGT	347,40604
chr17:75471230-75471489	chr17	+	75471288	75471538	True	NM_001113495,NR_036200	chr17,chr17	+,-	SEPT9,MIR4316	-14,-78152
chr1:48462388-48462637	chr1	+	48462392	48462676	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	0,225680
chr11:77531926-77532180	chr11	+	77531930	77532195	True	NM_016578,NM_024684	chr11,chr11	-,+	RSF1,C11orf67	-50,12
chr10:85935735-85937225	chr10	+	85936066	85936758	True	NM_001017924,NM_207373	chr10,chr10	-,+	LRIT2,C10orf99	48576,-2563
chr8:135728744-135729884	chr8	+	135728779	135729461	True	NM_020863,NR_002438,NM_001174157	chr8,chr8,chr8	-,+,-	ZFAT,ZFAT-AS1,ZFAT	-3487,-118517,-3487
chr19:45845830-45846779	chr19	+	45846100	45846416	True	NM_177417,NM_001824	chr19,chr19	+,-	KLC3,CKM	-2153,-19867
chr11:8061000-8061264	chr11	+	8061011	8061225	True	NM_003320,NM_176821	chr11,chr11	+,-	TUB,NLRP10	-882,-75952
chr16:15242896-15243429	chr16	+	15242964	15243380	True	NM_015027,NR_037466	chr16,chr16	+,-	PDXDC1,MIR3180-4	-174182,5529
chr14:102026985-102027196	chr14	+	102027139	102027245	True	NR_002770,NR_031649,NM_001362	chr14,chr14,chr14	-,-,+	DIO3OS,MIR1247,DIO3	-5126,-380,442
chr9:35665950-35667161	chr9	+	35666020	35666959	True	NM_032818,NM_001216,NR_003051,NM_001195200,NM_001195201,NM_001195217,NM_174923	chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,+,-,+,+,+,+	C9orf100,CA9,RMRP,CCDC107,CCDC107,CCDC107,CCDC107	-742,6955,-8005,-7791,-7791,-7791,-7791
chr5:1550550-1551087	chr5	+	1550565	1551135	True	NM_024830,NM_004553	chr5,chr5	-,+	LPCAT1,NDUFS6	-26489,250360
chr3:50352744-50353365	chr3	+	50352807	50353127	True	NM_007022,NM_153281,NM_033158,NM_003773	chr3,chr3,chr3,chr3	+,-,-,-	CYB561D2,HYAL1,HYAL2,HYAL2	35169,-2995,7212,7212
chr7:138360824-138361150	chr7	+	138360868	138361194	True	NM_001139456,NM_001085429	chr7,chr7	-,+	SVOPL,TMEM213	2646,121544
chrX:110489327-110489534	chrX	+	110489349	110489531	True	NM_001128173,NM_014289	chrX,chrX	+,-	PAK3,CAPN6	-123095,24293
chr7:12615335-12615900	chr7	+	12615486	12615948	True	NM_001112706,NM_001135924	chr7,chr7	+,-	SCIN,VWDE	-5334,-171634
chr15:35261644-35261899	chr15	+	35261714	35261896	True	NR_003144,NM_014691	chr15,chr15	+,-	LOC723972,AQR	267630,149
chr1:109584029-109584232	chr1	+	109584102	109584246	True	NM_001142550,NM_001142551,NM_014969,NM_020141	chr1,chr1,chr1,chr1	-,-,-,+	WDR47,WDR47,WDR47,TMEM167B	654,654,654,49156
chr14:23451555-23451772	chr14	+	23451691	23451763	True	NM_001099780,NM_198086,NM_032876	chr14,chr14,chr14	+,-,-	PSMB11,JUB,JUB	59612,-5259,135
chr2:187455343-187455557	chr2	+	187455348	187455414	True	NM_002210,NM_001145000,NM_182521,NM_001144999	chr2,chr2,chr2,chr2	+,+,-,+	ITGAV,ITGAV,ZSWIM2,ITGAV	-609,-609,258533,9517
chr5:54281107-54281360	chr5	+	54281111	54281349	True	NM_002104,NM_007036,NM_001135604	chr5,chr5,chr5	+,-,-	GZMK,ESM1,ESM1	38757,115,115
chr3:186525069-186525442	chr3	+	186525162	186525471	True	NR_002588,NM_181573,NM_002916	chr3,chr3,chr3	+,-,-	SNORA4,RFC4,RFC4	-19811,-678,-872
chr2:43999470-44001298	chr2	+	43999539	44001059	True	NM_015522,NM_022436,NM_001193464,NM_016008	chr2,chr2,chr2,chr2	+,-,+,+	DYNC2LI1,ABCG5,DYNC2LI1,DYNC2LI1	118,64953,118,118
chr5:43350241-43350672	chr5	+	43350309	43350695	True	NM_153361,NM_002130	chr5,chr5	+,-	MGC42105,HMGCS1	-158033,-36714
chr8:30866504-30866864	chr8	+	30866505	30866672	True	NM_013357,NM_000553	chr8,chr8	-,+	PURG,WRN	23704,24105
chr2:45818078-45819004	chr2	+	45818338	45818993	True	NM_018079,NM_005400	chr2,chr2	-,+	SRBD1,PRKCE	19497,60049
chr3:58475484-58476765	chr3	+	58475790	58476726	True	NM_153331,NM_003500,NM_001128214	chr3,chr3,chr3	+,-,+	KCTD6,ACOX2,KCTD6	7365,46253,1096
chr3:15643145-15643465	chr3	+	15643155	15643397	True	NM_000060,NM_012260	chr3,chr3	+,-	BTD,HACL1	23,-25
chr10:75319541-75320132	chr10	+	75319817	75320116	True	NM_152586,NM_004922	chr10,chr10	-,+	USP54,SEC24C	15372,184014
chr5:148647639-148649008	chr5	+	148647722	148648731	True	NM_001146337,NM_152406,NM_014443	chr5,chr5,chr5	+,+,-	AFAP1L1,AFAP1L1,IL17B	2669,2669,110158
chr12:56584337-56586324	chr12	+	56584661	56586338	True	NM_139067,NM_003075,NM_024068,NM_001130420,NM_079423	chr12,chr12,chr12,chr12,chr12	-,-,+,-,+	SMARCC2,SMARCC2,OBFC2B,SMARCC2,MYL6	-1310,-1310,31786,-1310,-32670
chr12:53613208-53613715	chr12	+	53613319	53613693	True	NM_001170790,NM_001042728	chr12,chr12	+,-	MFSD5,RARG	31676,507
chr1:53388991-53389357	chr1	+	53389208	53389310	True	NM_001198962,NM_002979,NM_001198961,NM_001193617,NM_001193600,NM_018281,NM_001193599,NM_001007098	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,+,-,+,+,-,+,+	ECHDC2,SCP2,ECHDC2,SCP2,SCP2,ECHDC2,SCP2,SCP2	-1762,3590,-1762,3590,3590,-1762,3590,3590
chr17:42388095-42389349	chr17	+	42388368	42388939	True	NM_001144826,NM_001143780,NM_001144825,NM_006695	chr17,chr17,chr17,chr17	+,-,+,+	RUNDC3A,SLC25A39,RUNDC3A,RUNDC3A	-2499,13337,-2499,-2499
chr7:20043365-20044162	chr7	+	20043445	20044215	True	NM_182762,NM_002214	chr7,chr7	-,+	MACC1,ITGB8	212852,326509
chr9:135853421-135854193	chr9	+	135853740	135854151	True	NM_001135031,NM_001162427,NM_004188	chr9,chr9,chr9	+,-,+	GFI1B,TSC1,GFI1B	-54,-33720,-54
chr19:16222523-16222844	chr19	+	16222696	16222824	True	NM_005370,NM_054113	chr19,chr19	+,-	RAB8A,CIB3	-257,61512
chr16:23467889-23468485	chr16	+	23468005	23468080	True	NM_019116,NM_153603	chr16,chr16	+,-	UBFD1,COG7	100781,-3493
chr7:64139586-64140402	chr7	+	64139640	64140386	True	NM_001130022,NM_016220	chr7,chr7	-,+	ZNF680,ZNF107	-116135,-13180
chr16:56555007-56556438	chr16	+	56555560	56556424	True	NM_031885,NM_032935	chr16,chr16	-,+	BBS2,MT4	-1552,42536
chr20:46130952-46131161	chr20	+	46130957	46131204	True	NM_006534,NM_001174088,NM_001174087,NM_181659,NM_183048	chr20,chr20,chr20,chr20,chr20	+,+,+,+,-	NCOA3,NCOA3,NCOA3,NCOA3,ZMYND8	-407,-407,-407,-407,-145483
chr3:120399905-120400573	chr3	+	120399904	120400592	True	NM_000187,NM_005513	chr3,chr3	-,+	HGD,GTF2E1	876,60965
chr18:40851684-40852705	chr18	+	40851700	40852722	True	NM_002647,NM_020783	chr18,chr18	+,-	PIK3C3,SYT4	-1316552,4943
chr19:19054146-19054453	chr19	+	19054253	19054461	True	NM_004838,NR_027297,NM_001145722,NM_001145721,NR_033677,NM_001145724	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,+,-	HOMER3,HOMER3,HOMER3,HOMER3,DDX49,HOMER3	-2212,-3809,-3140,-3092,-23820,-4395
chr4:153440372-153441301	chr4	+	153440492	153441164	True	NM_033632,NR_033797	chr4,chr4	-,+	FBXW7,DKFZP434I0714	15062,16251
chr2:88754942-88756042	chr2	+	88755425	88755859	True	NM_152670,NM_001135649	chr2,chr2	+,-	C2orf51,FOXI3	68309,-3372
chr3:32024276-32024506	chr3	+	32024315	32024543	True	NM_017784,NM_001174060,NM_001137674	chr3,chr3,chr3	-,-,+	OSBPL10,OSBPL10,ZNF860	-973,-973,-1101
chr8:123793834-123794064	chr8	+	123793839	123793901	True	NM_014943,NM_001134671	chr8,chr8	+,-	ZHX2,DERL1	1,260797
chr2:202110281-202110749	chr2	+	202110281	202110527	True	NM_033355,NM_001080125,NM_001127391	chr2,chr2,chr2	+,+,-	CASP8,CASP8,ALS2CR12	-12166,12226,111624
chr19:798271-798625	chr19	+	798369	798499	True	NM_024888,NM_175847,NM_031991,NM_031990,NM_002819	chr19,chr19,chr19,chr19,chr19	-,+,+,+,+	LPPR3,PTBP1,PTBP1,PTBP1,PTBP1	23503,-1028,-1028,-1028,-1028
chr10:125809713-125810617	chr10	+	125809823	125810203	True	NM_015892,NM_001167880	chr10,chr10	-,+	CHST15,LHPP	41777,340137
chr6:87671230-87672410	chr6	+	87671293	87672048	True	NM_000735,NM_000865	chr6,chr6	-,+	CGA,HTR1E	132835,-24320
chr14:50700351-50700856	chr14	+	50700676	50700837	True	NM_006939,NM_015684	chr14,chr14	-,+	SOS2,ATP5S	-2577,78209
chr13:55636743-55637607	chr13	+	55636859	55637514	True	NR_031628,NM_006418	chr13,chr13	-,+	MIR1297,OLFM4	-750676,-2034034
chr16:50324293-50324924	chr16	+	50324388	50324850	True	NM_001114,NM_001173984	chr16,chr16	+,-	ADCY7,BRD7	-2616,78045
chr2:74055331-74056076	chr2	+	74055359	74056049	True	NM_201647,NM_006463,NM_003584,NM_213622	chr2,chr2,chr2,chr2	+,+,-,+	STAMBP,STAMBP,DUSP11,STAMBP	36,77,-48075,97
chr7:34711468-34712470	chr7	+	34711943	34712515	True	NR_033664,NM_207173	chr7,chr7	-,+	AAA1,NPSR1	85419,-14107
chr6:35656834-35657092	chr6	+	35656975	35657052	True	NM_004117,NM_145028,NM_001145777,NM_001145776	chr6,chr6,chr6,chr6	-,+,-,-	FKBP5,C6orf81,FKBP5,FKBP5	-256,47806,-256,-283
chr13:98796446-98796719	chr13	+	98796494	98796764	True	NM_178861,NM_001001715,NM_005766	chr13,chr13,chr13	-,+,+	RNF113B,FARP1,FARP1	32807,-1111,-1111
chr7:97503577-97505462	chr7	+	97504353	97505499	True	NM_133436,NM_183356,NM_001178076,NM_001178077,NM_001178075,NM_001673,NM_013998	chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,-,+	ASNS,ASNS,ASNS,ASNS,ASNS,ASNS,TAC1	-2876,-2499,-2499,-2876,-2499,-2499,-143133
chr4:571673-572423	chr4	+	571790	572350	True	NM_000283,NM_133474	chr4,chr4	+,-	PDE6B,ZNF721	47012,-78348
chr8:146276608-146277276	chr8	+	146276608	146277222	True	NR_023392	chr8	-	ZNF252	-48323
chr18:19319843-19320554	chr18	+	19319929	19320535	True	NM_138340,NM_020774	chr18,chr18	-,+	ABHD3,MIB1	-35163,1009
chr16:14411889-14412945	chr16	+	14412102	14412286	True	NR_029854,NM_001134477	chr16,chr16	+,-	MIR365-1,PARN	-9013,311884
chr7:155603125-155604498	chr7	+	155603461	155604454	True	NM_000193,NM_053043	chr7,chr7	-,+	SHH,RBM33	563,-166309
chr6:159276944-159277513	chr6	+	159277075	159277503	True	NR_028496,NM_001195032	chr6,chr6	-,+	OSTCL,C6orf99	1211,32115
chr7:100200779-100201366	chr7	+	100200818	100201359	True	NM_001040098,NM_001040097,NM_002593,NM_023948,NM_002319,NM_001040099	chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,-,+	MOSPD3,MOSPD3,PCOLCE,MOSPD3,LRCH4,MOSPD3	8693,8365,-987,8754,-17042,8754
chr7:22741082-22742052	chr7	+	22741254	22741957	True	NM_000600,NM_019059	chr7,chr7	+,-	IL6,TOMM7	24808,120521
chr15:32933864-32934484	chr15	+	32933875	32934496	True	NM_003020,NR_036650,NM_001144757	chr15,chr15,chr15	+,-,+	SCG5,LOC100288615,SCG5	-56,-107933,-56
chr2:111141505-111141794	chr2	+	111141518	111141580	True	NR_037626,NR_027244	chr2,chr2	+,-	LOC100507334,LOC151009	-138354,583
chr2:111141505-111141794	chr2	-	110745078	110745140	False	NR_037627,NR_036225	chr2,chr2	+,-	LOC100288570,MIR4267	-39862,82529
chr17:48623675-48624464	chr17	+	48623840	48624412	True	NM_022827,NM_001267	chr17,chr17	+,-	SPATA20,CHAD	149,-77613
chr16:66879956-66881127	chr16	+	66880112	66881140	True	NM_001014435,NM_005182,NM_003905	chr16,chr16,chr16	+,+,-	CA7,CA7,NAE1	-1322,-1881,-15233
chr1:38469776-38470096	chr1	+	38469851	38470123	True	NM_004468,NM_016037	chr1,chr1	-,+	FHL3,UTP11L	1161,8260
chr5:1523051-1523282	chr5	+	1523062	1523152	True	NM_024830,NM_004553	chr5,chr5	-,+	LPCAT1,NDUFS6	974,278343
chr1:63248346-63248706	chr1	+	63248399	63248479	True	NM_033407,NM_178221,NM_032852	chr1,chr1,chr1	-,+,+	DOCK7,ATG4C,ATG4C	-94430,1297,1297
chr15:57664162-57664512	chr15	+	57664206	57664550	True	NM_032866,NR_015419	chr15,chr15	+,-	CGNL1,LOC145783	4154,-453509
chr3:38033116-38033500	chr3	+	38033184	38033456	True	NM_015873,NM_001130964	chr3,chr3	+,-	VILL,PLCD1	1621,32872
chr9:128025650-128026078	chr9	+	128025862	128026126	True	NM_005347,NM_015635	chr9,chr9	-,+	HSPA5,GAPVD1	-22196,-1802
chr15:78370245-78370559	chr15	+	78370270	78370582	True	NM_015079,NM_001101404,NM_144572	chr15,chr15,chr15	-,+,-	TBC1D2B,SH2D7,TBC1D2B	-276,14344,-276
chr16:30797625-30797931	chr16	+	30797639	30797775	True	NM_001080417,NM_014771	chr16,chr16	-,+	ZNF629,RNF40	798,-24060
chr7:150066249-150066463	chr7	+	150066248	150066508	True	NM_002889,NM_173680,NM_013400,NM_014374,NM_001099695,NM_001099696	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,+,+	RARRES2,ZNF775,REPIN1,REPIN1,REPIN1,REPIN1	-27485,9897,-420,1749,-420,-420
chr19:782761-783013	chr19	+	782821	783025	True	NM_024888,NM_002819	chr19,chr19	-,+	LPPR3,PTBP1	38977,14366
chr14:75534718-75535097	chr14	+	75535075	75535147	True	NM_001042430,NM_203488,NM_001107,NM_024643	chr14,chr14,chr14,chr14	+,-,-,+	FAM164C,ACYP1,ACYP1,FAM164C	1151,-4339,-4339,1151
chrX:133118647-133118988	chrX	+	133118647	133119026	True	NM_001164617,NM_001101357,NM_004484,NM_001164619,NM_001164618	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	GPC3,CCDC160,GPC3,GPC3,GPC3	697,252050,697,697,697
chr10:49383073-49383544	chr10	+	49383210	49383340	True	NR_033178,NR_033172,NM_002750	chr10,chr10,chr10	-,-,+	FRMPD2,FRMPD2P1,MAPK8	-16,-16,226346
chr10:49383073-49383544	chr10	+	46675758	46675815	False	NR_027632,NM_015605	chr10,chr10	+,-	FAM35B,PTPN20B	221825,-34755
chr10:49383073-49383544	chr10	+	48862658	48862715	False	NR_033172,NM_153034	chr10,chr10	-,+	FRMPD2P1,ZNF488	30,-507627
chr6:112068909-112070113	chr6	+	112069025	112070130	True	NR_034109,NM_153048	chr6,chr6	+,-	LOC643749,FYN	-264409,10212
chr6:116381964-116382850	chr6	+	116382134	116382893	True	NM_002031,NR_027338	chr6,chr6	-,+	FRK,TPI1P3	-213,-22297
chrX:134884185-134884422	chrX	+	134884227	134884403	True	NM_001017436,NM_001017435	chrX,chrX	-,+	CT45A4,CT45A3	52386,-790
chrX:134884185-134884422	chrX	+	134866953	134867133	False	NM_152582,NM_001017436	chrX,chrX	+,+	CT45A2,CT45A4	-790,-790
chrX:134884185-134884422	chrX	-	134935815	134935995	False	NM_018666,NM_001017436	chrX,chrX	+,-	SAGE1,CT45A4	39789,790
chrX:134884185-134884422	chrX	-	134953078	134953254	False	NM_001007551,NM_018666,NM_001172288	chrX,chrX,chrX	-,+,-	CT45A5,SAGE1,CT45A5	790,22530,790
chrX:134884185-134884422	chrX	-	134970328	134970504	False	NM_001017438,NM_018666	chrX,chrX	-,+	CT45A6,SAGE1	790,5280
chr7:48129429-48129882	chr7	+	48129474	48129843	True	NM_181597,NM_003364,NM_152782	chr7,chr7,chr7	+,+,-	UPP1,UPP1,SUN3	-1171,-780,-60758
chrX:70366101-70366668	chrX	+	70366272	70366706	True	NM_001166660,NM_181303,NM_018977,NM_000206	chrX,chrX,chrX,chrX	+,+,+,-	NLGN3,NLGN3,NLGN3,IL2RG	-1642,-1642,-1642,-34791
chr17:38861372-38862238	chr17	+	38861597	38862212	True	NM_019016,NM_001195387	chr17,chr17	-,+	KRT24,TMEM99	-1595,113131
chrX:44599370-44600336	chrX	+	44599715	44600276	True	NM_022076,NM_173794	chrX,chrX	+,-	DUSP21,FUNDC1	102972,-197494
chr8:104306485-104306740	chr8	+	104306519	104306773	True	NM_001164616,NM_001164615,NM_003506,NM_030780	chr8,chr8,chr8,chr8	+,+,+,-	FZD6,FZD6,FZD6,SLC25A32	4285,3887,4285,120745
chr2:17996414-17997115	chr2	+	17996708	17997154	True	NM_001105569,NM_024624	chr2,chr2	+,-	MSGN1,SMC6	631,-61612
chr20:37055507-37055913	chr20	+	37055575	37055799	True	NR_015366,NR_027241,NR_002911,NR_003239,NR_003017,NR_002910,NR_003018	chr20,chr20,chr20,chr20,chr20,chr20,chr20	-,-,-,+,-,-,-	LOC388796,LOC388796,SNORA71A,SNHG11,SNORA71C,SNORA71B,SNORA71D	8213,8269,337,19497,2698,-1597,6893
chr1:104068455-104068794	chr1	+	104068500	104068677	True	NM_001008218,NM_017619	chr1,chr1	-,+	AMY1B,RNPC3	170263,3
chr17:80472246-80473218	chr17	+	80472277	80473079	True	NR_036519,NM_004514	chr17,chr17	-,+	C17orf62,FOXK2	-63570,4514
chr2:75772756-75774402	chr2	+	75773013	75774311	True	NM_014763,NM_001135032	chr2,chr2	+,-	MRPL19,FAM176A	99597,13831
chr11:86027408-86028127	chr11	+	86027630	86028176	True	NR_024596,NM_007166	chr11,chr11	+,-	C11orf73,PICALM	-13289,-247522
chr22:35837916-35838131	chr22	+	35838009	35838071	True	NM_005368,NM_006739	chr22,chr22	-,+	MB,MCM5	175363,-41944
chr3:158369941-158371714	chr3	+	158369945	158371262	True	NM_024996,NM_020169	chr3,chr3	+,-	GFM1,LXN	-7683,19277
chr3:178975967-178976889	chr3	+	178976131	178976857	True	NM_171828,NM_171829,NM_171830,NM_001163677,NR_028135,NM_016331,NM_014407	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,-,+,-	KCNMB3,KCNMB3,KCNMB3,KCNMB3,KCNMB3,ZNF639,KCNMB3	8031,872,-6486,8031,872,64693,-6728
chr16:25266692-25267061	chr16	+	25266700	25266914	True	NM_001012981,NM_001169	chr16,chr16	-,+	ZKSCAN2,AQP8	1991,-38466
chr19:4536319-4536653	chr19	+	4536328	4536425	True	NM_052972,NM_032631,NM_001013706	chr19,chr19,chr19	-,+,-	LRG1,HDGFRP2,PLIN5	3670,-64124,-1120
chr8:144099363-144099651	chr8	+	144099395	144099695	True	NM_002346,NM_001127213,NR_026913	chr8,chr8,chr8	+,+,-	LY6E,LY6E,LOC100133669	206,206,162
chr13:111368681-111370028	chr13	+	111368749	111369792	True	NM_198218,NM_198219,NM_005537,NM_024537,NM_198217	chr13,chr13,chr13,chr13,chr13	+,+,+,-,+	ING1,ING1,ING1,CARS2,ING1	-3190,-3175,-1441,-10269,-3717
chr17:62097490-62097916	chr17	+	62097635	62097945	True	NM_001099788,NM_001099789,NM_001099786,NM_001099787,NM_001191031	chr17,chr17,chr17,chr17,chr17	-,-,-,-,+	ICAM2,ICAM2,ICAM2,ICAM2,C17orf72	99,99,99,99,-21975
chr1:115393557-115394542	chr1	+	115393574	115394547	True	NM_003176,NM_025073	chr1,chr1	+,-	SYCP1,SIKE1	2907,-70266
chr1:161516617-161518231	chr1	+	161516817	161518098	True	NM_000569,NM_001127593,NM_001127592,NM_001127595,NM_001127596,NM_002155	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,+	FCGR3A,FCGR3A,FCGR3A,FCGR3A,FCGR3A,HSPA6	1770,2365,1770,2365,2365,-22844
chr1:161516617-161518231	chr1	+	161598175	161599455	False	NR_024151,NM_000570	chr1,chr1	+,-	HSPA7,FCGR3B	-22389,1753
chr11:47506523-47506823	chr11	+	47506576	47506737	True	NM_001025596,NM_152264,NM_198700,NM_001172640	chr11,chr11,chr11,chr11	-,+,-,-	CELF1,SLC39A13,CELF1,CELF1	3896,-76592,9393,3896
chr10:104211165-104211386	chr10	+	104211283	104211411	True	NM_024789,NM_024886	chr10,chr10	+,-	TMEM180,C10orf95	9758,17
chr15:42565104-42565479	chr15	+	42565140	42565522	True	NM_198141,NM_015497,NM_001110503	chr15,chr15,chr15	+,-,-	GANC,TMEM87A,TMEM87A	843,283,283
chr3:9884912-9885113	chr3	+	9884998	9885110	True	NR_037162,NM_173659,NM_001142547	chr3,chr3,chr3	+,-,-	TTLL3,RPUSD3,RPUSD3	-33405,642,642
chr13:111213201-111213594	chr13	+	111213315	111213503	True	NM_017817,NM_018210	chr13,chr13	-,+	RAB20,CARKD	618,54504
chr6:58287574-58287801	chr6	+	58287616	58287850	True	NM_000947,NR_003660	chr6,chr6	+,-	PRIM2,GUSBP4	-1105245,-22
chrY:25090925-25091229	chrY	+	25090924	25091230	True	NR_002178,NR_002177,NM_004081,NR_001525	chrY,chrY,chrY,chrY	+,+,-,+	TTTY4B,TTTY4C,DAZ1,TTTY4	-8379,-8379,254059,-8379
chrY:25090925-25091229	chrY	+	26724682	26724988	False	NR_002178,NM_020364,NR_002177,NR_001525	chrY,chrY,chrY,chrY	+,-,+,+	TTTY4B,DAZ3,TTTY4C,TTTY4	-8390,234701,-8390,-8390
chrY:25090925-25091229	chrY	-	27237399	27237705	False	NR_002178,NR_002177,NM_001005786,NR_001525	chrY,chrY,chrY,chrY	-,-,+,-	TTTY4B,TTTY4C,DAZ2,TTTY4	8390,8390,-257460,8390
chr5:177031891-177032607	chr5	+	177031913	177032506	True	NR_024019,NM_007255	chr5,chr5	-,+	FAM193B,B4GALT7	-50365,-4845
chr1:34633064-34633363	chr1	+	34633121	34633393	True	NM_052896,NM_032884,NM_001134734	chr1,chr1,chr1	-,+,+	CSMD2,C1orf94,C1orf94	-1678,-548,9159
chr17:26800892-26802064	chr17	+	26801030	26802052	True	NM_080669,NM_003984,NM_001145976,NM_001145975,NR_027384	chr17,chr17,chr17,chr17,chr17	-,+,+,+,+	SLC46A1,SLC13A2,SLC13A2,SLC13A2,SLC13A2	-67802,-417,-417,-417,-417
chr11:18434169-18434719	chr11	+	18434208	18434488	True	NM_017448,NM_181508,NM_002301	chr11,chr11,chr11	+,-,+	LDHC,HPS5,LDHC	-418,-90487,-418
chr1:235290037-235291343	chr1	+	235290234	235291259	True	NM_001037277,NR_002956,NM_014765	chr1,chr1,chr1	+,-,-	GGPS1,SNORA14B,TOMM20	200493,43,1047
chr3:234479-235721	chr3	+	234755	235586	True	NM_000564,NM_006614	chr3,chr3	-,+	IL5RA,CHL1	2916531,3063
chr19:49373258-49373685	chr19	+	49373412	49373524	True	NM_014330,NM_020904,NM_001161354	chr19,chr19,chr19	+,-,-	PPP1R15A,PLEKHA4,PLEKHA4	2124,-1528,-1528
chr15:31282081-31283510	chr15	+	31282233	31283445	True	NM_017762,NM_014967	chr15,chr15	-,+	MTMR10,FAN1	412,-86213
chr2:114036517-114037471	chr2	+	114036630	114037266	True	NR_015377,NM_003466,NM_013952,NM_013953,NM_013992	chr2,chr2,chr2,chr2,chr2	+,-,-,-,-	LOC654433,PAX8,PAX8,PAX8,PAX8	-42835,-132,-132,-132,-132
chr3:15141248-15141604	chr3	+	15141257	15141651	True	NM_022340,NM_014296	chr3,chr3	-,+	ZFYVE20,CAPN7	-602,106081
chr12:72243829-72244143	chr12	+	72243828	72244143	True	NR_027449,NR_024072	chr12,chr12	+,-	TBC1D15,MRS2P2	-10401,671
chr22:25395638-25396251	chr22	+	25395801	25395868	True	NM_001001663,NM_001145206	chr22,chr22	-,+	TMEM211,KIAA1671	-60487,28072
chr1:1473910-1474192	chr1	+	1474064	1474160	True	NM_001170536,NM_001114748	chr1,chr1	+,-	ATAD3A,C1orf70	-26205,1630
chr7:28338391-28338788	chr7	+	28338405	28338803	True	NM_182899,NM_175061	chr7,chr7	+,-	CREB5,JAZF1	136,-117968
chr17:20492864-20493501	chr17	+	20492912	20493536	True	NM_001190790,NR_029393	chr17,chr17	+,-	CDRT15L2,KRT16P3	-9926,-85101
chr17:20492864-20493501	chr17	+	15690239	15690525	False	NM_006470,NR_002211	chr17,chr17	-,+	TRIM16,MEIS3P1	-104046,-126
chr9:34399808-34400394	chr9	+	34399820	34400302	True	NM_012144,NM_032596	chr9,chr9	+,-	DNAI1,C9orf24	58508,-1971
chr1:201924073-201924385	chr1	+	201924324	201924408	True	NM_006335,NM_012134	chr1,chr1	+,-	TIMM17A,LMOD1	210,-8608
chr9:99998665-99999694	chr9	+	99999009	99999741	True	NR_036528,NR_036529,NM_199005,NR_036526,NR_036527	chr9,chr9,chr9,chr9,chr9	+,+,-,+,+	LOC57653,LOC57653,ZNF322B,LOC100499484,LOC57653	966,966,-37099,966,966
chr8:10384857-10385187	chr8	+	10384866	10385118	True	NM_001197020,NM_178857,NM_198464	chr8,chr8,chr8	+,-,+	PRSS55,RP1L1,PRSS55	-1861,127549,-1861
chrX:89294853-89295946	chrX	+	89294929	89295852	True	NM_138960,NM_004538	chrX,chrX	+,-	TGIF2LX,NAP1L3	-118040,3632881
chr5:55775839-55776375	chr5	+	55775884	55776368	True	NM_024669,NM_005921	chr5,chr5	-,+	ANKRD55,MAP3K1	-246698,334531
chr6:46783243-46783764	chr6	+	46783277	46783658	True	NM_001168357,NM_005588	chr6,chr6	-,+	PLA2G7,MEP1A	-79847,-22234
chr6:33376865-33377793	chr6_qbl_hap6	+	4609174	4609943	False	NM_001350,NM_002263	chr6_qbl_hap6,chr6_qbl_hap6	-,+	DAXX,KIFC1	-86132,-17685
chr6:33376865-33377793	chr6	+	33376957	33377738	True	NM_002636,NM_001014838,NM_001014433,NM_001014837,NM_001014840,NM_024165,NR_027692,NM_015921	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	+,-,-,-,-,+,+,-	PHF1,CUTA,CUTA,CUTA,CUTA,PHF1,PHF1,CUTA	1034,8377,8377,8377,8377,1034,1034,8377
chr6:33376865-33377793	chr6_ssto_hap7	+	4857176	4857957	False	NM_002636,NM_001014838,NM_001014433,NM_001014837,NM_001014840,NM_024165,NR_027692	chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7	+,-,-,-,-,+,+	PHF1,CUTA,CUTA,CUTA,CUTA,PHF1,PHF1	1063,8404,8404,8404,8404,1063,1063
chrX:135929244-135929506	chrX	+	135929272	135929444	True	NR_002735,NM_000074	chrX,chrX	-,+	SNORD61,CD40LG	32036,-198988
chr12:82151009-82151351	chr12	+	82151009	82151373	True	NM_032230,NM_003625	chr12,chr12	+,-	C12orf26,PPFIA2	600902,1794
chr22:37215080-37215378	chr22	+	37215083	37215343	True	NM_000631,NM_002854	chr22,chr22	+,-	NCF4,PVALB	41686,224
chr12:56728377-56728974	chr12	+	56728462	56728969	True	NM_001127460,NM_014871,NM_001166279,NM_016584	chr12,chr12,chr12,chr12	-,-,-,+	PAN2,PAN2,PAN2,IL23A	-929,-625,-625,3693
chr19:56652809-56653139	chr19	+	56652944	56653134	True	NM_001002836,NM_018337	chr19,chr19	-,+	ZNF787,ZNF444	-20295,-439
chr16:71663146-71664382	chr16	+	71663162	71663865	True	NM_000353,NM_001017967,NM_052858	chr16,chr16,chr16	-,+,+	TAT,MARVELD3,MARVELD3	-52164,-3143,-3143
chr3:185213849-185214628	chr3	+	185213856	185214474	True	NM_080652,NM_021627	chr3,chr3	-,+	TMEM41A,SENP2	2421,89556
chr20:2854841-2855193	chr20	+	2854862	2855238	True	NM_022760,NM_080840	chr20,chr20	-,+	FAM113A,PTPRA	-33530,-771
chr12:16752092-16753725	chr12	+	16752179	16753749	True	NM_018640,NM_001001395,NM_145764	chr12,chr12,chr12	-,-,+	LMO3,LMO3,MGST1	5732,7325,-245879
chr6:18171142-18172347	chr6	+	18171482	18172368	True	NM_000367,NM_153042	chr6,chr6	-,+	TPMT,KDM1B	-16108,-15921
chr2:34104928-34105177	chr2	+	34104953	34105149	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-366062,-151669
chr14:92589320-92589563	chr14	+	92589400	92589482	True	NM_004545,NM_017437	chr14,chr14	-,+	NDUFB1,CPSF2	-1247,-1154
chrX:73523754-73524047	chrX	+	73523855	73524030	True	NM_203303,NR_028379	chrX,chrX	+,-	ZCCHC13,MIR374AHG	-3,-10446
chr13:109280260-109281825	chr13	+	109280283	109281758	True	NM_001098268,NM_001198950	chr13,chr13	-,+	LIG4,MYO16	-409567,125
chr11:58874788-58875025	chr11	+	58874913	58875071	True	NM_001142704,NR_033853,NM_001142703,NM_198947	chr11,chr11,chr11,chr11	+,-,+,+	FAM111B,LOC283194,FAM111B,FAM111B	-306,-48988,-306,-306
chr3:17730751-17731799	chr3	+	17731110	17731630	True	NM_001134381,NR_037465	chr3,chr3	-,+	TBC1D5,MIR3714	9942,-756480
chr12:53049263-53050062	chr12	+	53049541	53050061	True	NM_199187,NM_000423	chr12,chr12	+,-	KRT18,KRT2	292593,-3582
chr12:56546339-56546586	chr12	+	56546521	56546585	True	NM_021019,NM_002475,NM_079423,NM_001130420,NM_001199629	chr12,chr12,chr12,chr12,chr12	+,+,+,-,+	MYL6,MYL6B,MYL6,SMARCC2,MYL6B	5459,-368,5459,36816,-368
chr10:23397765-23398198	chr10	+	23397769	23398125	True	NM_012228,NM_153714	chr10,chr10	+,-	MSRB2,C10orf67	-13399,235697
chrX:74376311-74377013	chrX	+	74376400	74376866	True	NM_145052,NM_004299	chrX,chrX	+,-	UPRT,ABCB7	117027,-268
chr1:33720015-33720971	chr1	+	33720038	33720902	True	NM_018207,NM_152493	chr1,chr1	-,+	TRIM62,ZNF362	-72367,1271
chr1:48695912-48697042	chr1	+	48695996	48696988	True	NR_026749,NM_001011547,NM_001135181	chr1,chr1,chr1	-,+,+	SKINTL,SLC5A9,SLC5A9	-47896,-7690,-7690
chr11:125547867-125549203	chr11	+	125548011	125549009	True	NM_020108,NM_020069,NM_001612,NM_001274,NM_020107	chr11,chr11,chr11,chr11,chr11	-,-,-,+,-	ACRV1,ACRV1,ACRV1,CHEK1,ACRV1	1846,1846,1846,-51750,1846
chr10:62133976-62135884	chr10	+	62134282	62135874	True	NM_001170406,NM_020987	chr10,chr10	+,-	CDK1,ANK3	402214,13818
chr21:17450061-17452009	chr21	+	17450083	17451760	True	NM_003489,NR_027790	chr21,chr21	-,+	NRIP1,C21orf34	-1012957,-7304
chr1:26606297-26606584	chr1	+	26606327	26606592	True	NM_031286,NM_001077262	chr1,chr1	+,-	SH3BGRL3,UBXN11	-165,26653
chr14:39683890-39685028	chr14	+	39684256	39685071	True	NM_177452,NM_054024	chr14,chr14	-,+	TRAPPC6B,MIA2	-44622,18053
chr7:76798462-76799410	chr7	+	76798547	76799425	True	NM_006682,NM_020879	chr7,chr7	-,+	FGL2,CCDC146	29775,-46672
chr7:76798462-76799410	chr7	-	102341353	102341896	False	NM_032959,NM_001145268	chr7,chr7	-,+	POLR2J2,FAM185A	-29171,47502
chr11:109961835-109962950	chr11	+	109962169	109962879	True	NM_033390,NM_002906	chr11,chr11	+,-	ZC3H12C,RDX	1207,204608
chr4:1797311-1798068	chr4	+	1797806	1798046	True	NM_012318,NM_000142,NM_001163213,NM_022965	chr4,chr4,chr4,chr4	-,+,+,+	LETM1,FGFR3,FGFR3,FGFR3	59978,-2818,-2818,-2818
chr1:85462959-85463164	chr1	+	85463005	85463199	True	NM_145172,NM_153259	chr1,chr1	+,-	WDR63,MCOLN2	64793,-209
chr16:4167858-4169506	chr16	+	4168033	4169404	True	NM_001116,NM_032575	chr16,chr16	-,+	ADCY9,GLIS2	-1847,212820
chr10:121298894-121300057	chr10	+	121298981	121300103	True	NM_001005339,NM_002925,NM_004281	chr10,chr10,chr10	-,-,+	RGS10,RGS10,BAG3	2169,-2936,110778
chr2:149236006-149237184	chr2	+	149236190	149237178	True	NM_181742,NM_015630	chr2,chr2	-,+	ORC4,EPC2	-457017,165381
chr13:50508613-50509900	chr13	+	50508754	50509818	True	NR_023351,NR_003268,NM_020456,NM_001127482	chr13,chr13,chr13,chr13	-,+,-,-	C13orf1,CTAGE10P,C13orf1,C13orf1	857,-44262,857,857
chr10:52751055-52751305	chr10	+	52751135	52751299	True	NM_138933,NM_001098512	chr10,chr10	-,+	A1CF,PRKG1	-105700,-241
chr20:48805593-48805864	chr20	+	48805652	48805830	True	NR_027889,NM_005194	chr20,chr20	-,+	TMEM189,CEBPB	-35317,1545
chr17:79607918-79608535	chr17	+	79608197	79608575	True	NM_017921,NM_031945	chr17,chr17	-,+	NPLOC4,TSPAN10	-4059,773
chr21:45628072-45629412	chr21	+	45628076	45629404	True	NM_198155,NM_015259	chr21,chr21	+,-	C21orf33,ICOSLG	-74633,31480
chr8:41167999-41168324	chr8	+	41168049	41168365	True	NM_001174124,NM_003012	chr8,chr8	+,-	GOLGA7,SFRP1	179715,-1059
chr22:24129499-24129963	chr22	+	24129637	24130003	True	NM_213720,NM_003073,NM_001007468	chr22,chr22,chr22	-,+,+	CHCHD10,SMARCB1,SMARCB1	-19496,-538,-538
chr15:90117941-90118345	chr15	+	90118138	90118361	True	NM_152259,NR_027077	chr15,chr15	+,-	C15orf42,LOC283761	456,-50873
chr2:69973435-69975365	chr2	+	69973516	69974809	True	NM_001153,NM_014911	chr2,chr2	+,-	ANXA4,AAK1	-4448,-102539
chr11:68782731-68783263	chr11	+	68782737	68783307	True	NM_139075,NM_001098515,NM_145015	chr11,chr11,chr11	+,-,-	TPCN2,MRGPRF,MRGPRF	33042,-1887,-1887
chr3:191063491-191064564	chr3	+	191063605	191064495	True	NM_178335,NM_198152	chr3,chr3	+,-	CCDC50,UTS2D	-16783,-15280
chr12:7590306-7591765	chr12	+	7590520	7591775	True	NM_174941,NM_001080454	chr12,chr12	-,+	CD163L1,ACSM4	5024,-133648
chr6:168686414-168686866	chr6	+	168686585	168686909	True	NM_214462,NM_001166412	chr6,chr6	-,+	DACT2,SMOC2	33543,154921
chr5:126627059-126627391	chr5	+	126627129	126627384	True	NM_032446,NM_001164478	chr5,chr5	+,-	MEGF10,FLJ44606	-724,-217945
chr20:57583711-57584387	chr20	+	57583789	57584427	True	NM_001336,NM_030773	chr20,chr20	-,+	CTSZ,TUBB1	-1480,9881
chr3:3841615-3841902	chr3	+	3841749	3841892	True	NM_016302,NM_020873	chr3,chr3	-,+	CRBN,LRRN1	-620348,-679
chr2:131098570-131099358	chr2	+	131098650	131099181	True	NM_033416,NM_032357	chr2,chr2	+,-	IMP4,CCDC115	1307,804
chr1:166572899-166574753	chr1	+	166573109	166574609	True	NM_053053,NR_002925	chr1,chr1	-,+	TADA1,FMO9P	271103,-17
chr2:32238798-32239643	chr2	+	32239139	32239262	True	NM_015955,NM_014946,NM_001137602	chr2,chr2,chr2	-,+,-	MEMO1,SPAST,MEMO1	-3441,49417,-3441
chr8:42911073-42911360	chr8	+	42911075	42911273	True	NR_027669,NR_033698,NM_002027	chr8,chr8,chr8	-,+,+	RNF170,FNTA,FNTA	-159209,168,168
chr1:46806027-46806286	chr1	+	46806031	46806309	True	NM_006369,NM_199044	chr1,chr1	-,+	LRRC41,NSUN4	-36993,80
chr20:31870095-31870882	chr20	+	31870099	31870836	True	NM_033197,NM_016082	chr20,chr20	+,-	C20orf114,CDK5RAP1	104,118551
chr12:8663186-8663724	chr12	+	8663206	8663507	True	NM_014358,NM_080387	chr12,chr12	-,+	CLEC4E,CLEC4D	30102,2628
chr18:21083745-21084093	chr18	+	21083923	21084107	True	NM_013326,NM_032933	chr18,chr18	+,-	C18orf8,C18orf45	-512,-65998
chr16:15744516-15744746	chr16	+	15744560	15744761	True	NM_001143979,NM_001184998,NM_014647,NR_030159,NM_001184999,NM_017668	chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,+,-,+	NDE1,KIAA0430,KIAA0430,MIR484,KIAA0430,NDE1	-7487,-7537,-7537,-7460,-7537,-528
chr10:135194722-135195003	chr10	+	135194782	135195052	True	NM_207127,NR_037509,NM_004092,NM_152911,NM_207128	chr10,chr10,chr10,chr10,chr10	+,-,-,+,+	PAOX,MIR3944,ECHS1,PAOX,PAOX	-2092,-9615,-7874,-2092,-2092
chr16:2028750-2029171	chr16	+	2028789	2029197	True	NM_144603,NM_172168,NM_172167,NM_005262,NM_006453	chr16,chr16,chr16,chr16,chr16	-,-,-,+,+	NOXO1,NOXO1,NOXO1,GFER,TBL3	2293,2037,2037,4952,-6776
chr9:35404478-35406313	chr9	+	35404640	35406240	True	NM_001099951,NR_003582,NR_003581	chr9,chr9,chr9	-,+,+	FAM166B,ATP8B5P,ATP8B5P	157706,511,524
chr4:69048095-69048551	chr4	+	69048219	69048587	True	NR_015446,NM_001129907	chr4,chr4	+,-	FTLP10,TMPRSS11BNL	-260,35261
chr6:25913293-25914589	chr6	+	25913292	25914609	True	NM_006355,NM_005835	chr6,chr6	+,-	TRIM38,SLC17A2	48461,16387
chr7:96645493-96645870	chr7	+	96645559	96645763	True	NM_005221,NM_005222,NR_015448	chr7,chr7,chr7	-,+,-	DLX5,DLX6,DLX6-AS1	8430,-10323,-2182
chr8:81082027-81082504	chr8	+	81082027	81082353	True	NM_005079,NM_001025253,NM_001105539	chr8,chr8,chr8	-,-,+	TPD52,TPD52,ZBTB10	1535,1535,316094
chr14:50556774-50557940	chr14	+	50556847	50557793	True	NM_001014830,NM_001663	chr14,chr14	-,+	C14orf183,ARF6	1629,-197175
chr12:107721035-107721711	chr12	+	107721072	107721744	True	NM_001018072,NM_004075	chr12,chr12	+,-	BTBD11,CRY1	-8926,-233474
chr7:100061737-100062159	chr7	+	100061868	100062139	True	NM_001004323,NM_173564	chr7,chr7	-,+	C7orf61,C7orf51	26,19410
chr5:36240675-36241058	chr5	+	36240680	36241096	True	NM_001085411,NM_153013,NM_032637	chr5,chr5,chr5	-,-,+	C5orf33,C5orf33,SKP2	854,1212,-88546
chr19:17669041-17669688	chr19	+	17669174	17669639	True	NM_138454,NM_024656	chr19,chr19	-,+	NXNL1,GLT25D1	-97449,-2714
chr19:48058518-48058874	chr19	+	48058680	48058908	True	NM_015711,NM_001101419	chr19,chr19	+,-	GLTSCR1,ZNF541	52544,255
chr11:73358688-73359289	chr11	+	73358732	73359312	True	NM_001130036,NM_001130034,NM_001130035,NM_001130033,NM_021200,NM_015159	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,-	PLEKHB1,PLEKHB1,PLEKHB1,PLEKHB1,PLEKHB1,FAM168A	422,-189,-189,-1560,-1560,-49504
chr17:8537386-8537824	chr17	+	8537678	8537756	True	NM_030808,NM_005964	chr17,chr17	+,-	NDEL1,MYH10	-198550,-3642
chr3:93691615-93691834	chr3	+	93691802	93691890	True	NM_144996,NM_000313,NM_182896,NM_001174151,NM_001174150,NR_033427	chr3,chr3,chr3,chr3,chr3,chr3	+,-,+,+,+,+	ARL13B,PROS1,ARL13B,ARL13B,ARL13B,ARL13B	7092,1102,7092,7092,7092,7092
chr21:35831254-35831732	chr21	+	35831263	35831645	True	NM_001127670,NM_001127669,NM_001127668,NM_058182	chr21,chr21,chr21,chr21	-,-,-,+	KCNE1,KCNE1,KCNE1,FAM165B	-3200,314,314,-83565
chr1:12124522-12125230	chr1	+	12124534	12125034	True	NM_001243,NM_138346	chr1,chr1	+,-	TNFRSF8,KIAA2013	-1151,-138049
chr8:87357932-87358574	chr8	+	87357958	87358441	True	NM_007013,NM_138817	chr8,chr8	+,-	WWP1,SLC7A13	-3027,-115354
chr4:39476855-39477203	chr4	+	39477139	39477213	True	NR_026854,NM_000661	chr4,chr4	+,-	LOC401127,RPL9	4661,-16571
chr8:8019560-8020289	chr8	+	8020089	8020307	True	NR_031689,NR_024362	chr8,chr8	-,+	MIR548I3,FLJ10661	-73478,65784
chr8:8019560-8020289	chr8	-	12360381	12360599	False	NR_026789,NM_001137610	chr8,chr8	+,-	FAM66A,FAM86B2	-140904,-66529
chr4:154710204-154710589	chr4	+	154710288	154710460	True	NM_003264,NM_003013	chr4,chr4	+,-	TLR2,SFRP2	-104898,-60
chr6:116598987-116599956	chr6	+	116599230	116599990	True	NM_003309,NM_001080976	chr6,chr6	-,+	TSPYL1,DSE	1340,1292
chr6:7406523-7407052	chr6	+	7406635	7406711	True	NM_153005,NM_001170693	chr6,chr6	+,-	RIOK1,CAGE1	-3813,-16693
chr20:31595963-31597215	chr20	+	31596163	31597237	True	NM_025227,NM_080675	chr20,chr20	+,-	BPIL1,SUN5	-807,-3924
chr19:1239384-1239604	chr19	+	1239472	1239632	True	NM_001001975,NM_177401,NM_001687,NM_152769	chr19,chr19,chr19,chr19	+,+,+,-	ATP5D,MIDN,ATP5D,C19orf26	2116,8919,2116,-1482
chr19:54585098-54585855	chr19	+	54585624	54585821	True	NM_004542,NM_001135686	chr19,chr19	+,-	NDUFA3,TARM1	20338,-990
chr3:169938506-169939202	chr3	+	169938551	169939039	True	NM_002740,NM_024947	chr3,chr3	+,-	PRKCI,PHC3	1180,-39014
chr5:173325925-173327457	chr5	+	173325995	173327122	True	NM_030627,NM_138369	chr5,chr5	+,-	CPEB4,BOD1	-10725,-282329
chr1:2321918-2322341	chr1	+	2322065	2322191	True	NM_024848,NM_007033	chr1,chr1	-,+	MORN1,RER1	858,1022
chr9:122130440-122130815	chr9	+	122130581	122130861	True	NR_027442,NM_014618	chr9,chr9	+,-	LOC100288842,DBC1	1424913,928
chr1:25289424-25289778	chr1	+	25289451	25289539	True	NM_013943,NM_001031680	chr1,chr1	+,-	CLIC4,RUNX3	-217743,2012
chr7:114569575-114569835	chr7	+	114569627	114569847	True	NM_002711,NM_001166346,NM_001166345,NM_199072	chr7,chr7,chr7,chr7	-,+,+,+	PPP1R3A,MDFIC,MDFIC,MDFIC	-1010545,-7469,-7469,-7469
chr11:93529652-93529983	chr11	+	93529652	93529942	True	NM_001144871,NM_004268	chr11,chr11	-,+	C11orf90,MED17	53782,-12299
chr14:70549965-70550596	chr14	+	70550041	70550609	True	NM_022137,NM_001130417,NM_182936	chr14,chr14,chr14	+,-,-	SMOC1,SLC8A3,SLC8A3	-203978,-3118,-3123
chr20:34203256-34203493	chr20	+	34203412	34203502	True	NR_024377,NM_003116	chr20,chr20	-,+	FER1L4,SPAG4	-7928,306
chr1:11796693-11796929	chr1	+	11796705	11796835	True	NM_001040195,NM_001040194,NM_001040197,NM_001040196,NM_020350,NM_001127325	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-	AGTRAP,AGTRAP,AGTRAP,AGTRAP,AGTRAP,MAD2L2	-614,-614,-614,-614,-614,-45027
chr8:12225401-12225993	chr8	+	12225448	12225814	True	NR_024044,NR_026789	chr8,chr8	-,+	DEFB109P1,FAM66A	32110,-5971
chr8:12225401-12225993	chr8	+	7818455	7818821	False	NR_003668,NR_027424	chr8,chr8	-,+	DEFB109P1B,FAM66E	36272,-5971
chr15:31195610-31195921	chr15	+	31195651	31195831	True	NM_017762,NM_014967,NM_001146095,NM_001146094,NM_001146096	chr15,chr15,chr15,chr15,chr15	-,+,+,+,+	MTMR10,FAN1,FAN1,FAN1,FAN1	88026,244,223,244,244
chr1:35245259-35246724	chr1	+	35245258	35246659	True	NM_001164824,NM_024009,NM_001005752	chr1,chr1,chr1	-,+,+	C1orf212,GJB3,GJB3	78048,130,1251
chr22:25203831-25204235	chr22	+	25203907	25204070	True	NM_001098498,NM_001008496,NM_001098497,NM_001039948,NM_133454	chr22,chr22,chr22,chr22,chr22	+,-,+,+,+	SGSM1,PIWIL3,SGSM1,SGSM1,SGSM1	-1823,-33224,-1823,-1823,-1823
chr11:88695023-88696793	chr11	+	88695028	88696736	True	NM_001143831,NM_000372	chr11,chr11	-,+	GRM5,TYR	84563,214303
chr22:37217128-37217373	chr22	+	37217132	37217370	True	NM_000631,NM_002854	chr22,chr22	+,-	NCF4,PVALB	39659,-1615
chr1:46673630-46674235	chr1	+	46673945	46674241	True	NM_001013615,NM_017739	chr1,chr1	+,-	C1orf190,POMGNT1	-4990,-9824
chr20:30948709-30948973	chr20	+	30948840	30948917	True	NM_080616,NM_015338,NM_001164603	chr20,chr20,chr20	-,+,+	C20orf112,ASXL1,ASXL1	122424,-2747,-2747
chr9:135935350-135935848	chr9	+	135935443	135935899	True	NM_001807,NM_006266	chr9,chr9	+,-	CEL,RALGDS	1465,60714
chr7:190791-191017	chr7	+	190836	190992	True	NM_002607,NM_020223	chr7,chr7	-,+	PDGFA,FAM20C	368539,1976
chr16:68773174-68774972	chr16	+	68773446	68774930	True	NM_004360,NM_018667	chr16,chr16	+,-	CDH1,SMPD3	-2302,-291037
chr16:54320523-54320884	chr16	+	54320523	54320675	True	NM_001080432,NM_024336	chr16,chr16	+,-	FTO,IRX3	-582701,-145
chr2:28617522-28618326	chr2	+	28617524	28618306	True	NM_017910,NM_005253	chr2,chr2	-,+	TRMT61B,FOSL2	474919,-1796
chr16:75500311-75501834	chr16	+	75501023	75501884	True	NM_145254,NM_007285	chr16,chr16	-,+	TMEM170A,GABARAPL2	-2439,98364
chr19:54784664-54785092	chr19	+	54784672	54784946	True	NM_001013,NM_005874,NM_001080978	chr19,chr19,chr19	+,-,-	RPS9,LILRB2,LILRB2	-79997,137,137
chr2:28740291-28740832	chr2	+	28740308	28740733	True	NM_017910,NM_153021	chr2,chr2	-,+	TRMT61B,PLB1	352501,-21421
chr3:133613268-133613568	chr3	+	133613367	133613605	True	NM_021203,NM_016577	chr3,chr3	+,-	SRPRB,RAB6B	-110541,1136
chr21:45959378-45959771	chr21	+	45959435	45959625	True	NR_026548,NM_198691	chr21,chr21	+,-	C21orf90,KRTAP10-1	-22388,503
chr20:57552566-57552889	chr20	+	57552608	57552730	True	NM_001336,NM_198976	chr20,chr20	-,+	CTSZ,TH1L	29635,3580
chr11:6462389-6463777	chr11	+	6462418	6463764	True	NM_012192,NM_000613	chr11,chr11	+,-	FXC1,HPX	38912,-164
chr12:69754054-69754697	chr12	+	69754097	69754695	True	NM_006530,NR_031692	chr12,chr12	+,-	YEATS4,MIR1279	-616,-87099
chr20:62583662-62583944	chr20	+	62583713	62583967	True	NR_030377,NM_017859,NM_001193379,NR_027287	chr20,chr20,chr20,chr20	-,-,-,+	MIR647,UCKL1,UCKL1,UCKL1-AS1	-9634,3883,-1186,769
chr4:186580153-186580496	chr4	+	186580212	186580514	True	NM_001114357,NM_001145674,NM_001145675	chr4,chr4,chr4	+,-,-	C4orf47,SORBS2,SORBS2	-229732,-2089,-2089
chr13:27137714-27139239	chr13	+	27138214	27139122	True	NM_005288,NM_006646	chr13,chr13	-,+	GPR12,WASF3	195857,-6425
chr5:131561434-131562321	chr5	+	131561469	131562110	True	NM_001017973,NM_001142598,NM_001142599,NM_001017974,NM_001131027,NM_004199	chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,+,-	P4HA2,P4HA2,P4HA2,P4HA2,PDLIM4,P4HA2	878,1499,1499,1499,31240,878
chr14:91312008-91313859	chr14	+	91312523	91313639	True	NM_001010854,NM_001102366	chr14,chr14	-,+	TTC7B,C14orf159	-29762,266717
chr8:103935044-103935734	chr8	+	103935372	103935788	True	NM_148174,NM_001695	chr8,chr8	-,+	AZIN1,ATP6V1C1	-58975,97459
chr2:3645416-3645616	chr2	+	3645419	3645479	True	NM_199235,NM_002936,NM_024027	chr2,chr2,chr2	+,-,+	COLEC11,RNASEH1,COLEC11	-2833,-39479,-2833
chr1:224025181-224025670	chr1	+	224025235	224025599	True	NM_001031685,NM_005426,NM_001748	chr1,chr1,chr1	-,-,+	TP53BP2,TP53BP2,CAPN2	8125,8125,-125177
chr16:523411-523847	chr16	+	523732	523856	True	NR_024121,NM_001142272	chr16,chr16	-,+	NCRNA00235,RAB11FIP3	53601,993
chr11:33259542-33260702	chr11	+	33259976	33260713	True	NM_001033506,NM_001048200	chr11,chr11	-,+	CSTF3,HIPK3	-76939,18454
chr3:195449743-195450034	chr3	+	195449769	195449931	True	NM_001098516,NM_004532,NM_152673	chr3,chr3,chr3	+,-,+	MUC20,MUC4,MUC20	1166,89267,-2067
chr8:42398396-42399270	chr8	+	42398475	42399282	True	NM_138436,NM_006749,NM_001135676,NM_001135675,NM_001135674	chr8,chr8,chr8,chr8,chr8	+,-,+,+,+	C8orf40,SLC20A2,C8orf40,C8orf40,C8orf40	-1808,-1407,-2228,-1587,-1761
chr8:21918003-21918648	chr8	+	21918027	21918487	True	NM_001978,NM_024815,NM_001114135,NM_001114137,NM_001114136,NM_001114139,NM_001114138	chr8,chr8,chr8,chr8,chr8,chr8,chr8	+,-,+,+,+,+,+	EPB49,NUDT18,EPB49,EPB49,EPB49,EPB49,EPB49	-1396,48495,-2706,-7001,-5754,-5754,-1396
chr19:39110023-39110529	chr19	+	39110258	39110552	True	NM_013234,NM_007181,NM_001042600	chr19,chr19,chr19	+,-,-	EIF3K,MAP4K1,MAP4K1	-588,-1615,-1615
chr12:123869378-123870252	chr12	+	123869465	123869883	True	NM_020382,NM_018183	chr12,chr12	+,-	SETD8,SBNO1	-812,-34477
chr5:145252092-145252480	chr5	+	145252134	145252472	True	NM_152550,NM_001080516	chr5,chr5	+,-	SH3RF2,GRXCR2	63653,109
chr17:79448340-79448615	chr17	+	79448539	79448617	True	NM_001077182,NR_036152	chr17,chr17	+,-	FSCN2,MIR3186	46799,-30325
chr3:195623433-195623812	chr3	+	195623553	195623827	True	NM_001098516,NM_001010938	chr3,chr3	+,-	MUC20,TNK2	-172506,-1121
chrX:149010468-149011881	chrX	+	149010616	149011854	True	NM_001166400,NM_001166401,NM_005364,NM_001013845	chrX,chrX,chrX,chrX	+,+,+,-	MAGEA8,MAGEA8,MAGEA8,CXorf40B	-726,-726,-726,94912
chr4:1876979-1877349	chr4	+	1877034	1877324	True	NM_012318,NM_001042424	chr4,chr4	-,+	LETM1,WHSC1	-19060,-3962
chr19:38812315-38813472	chr19	+	38812637	38813060	True	NM_001145462,NM_001145461,NM_001039671,NM_001145463,NM_001039673,NM_001039672,NM_004823	chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,+	YIF1B,YIF1B,YIF1B,YIF1B,YIF1B,YIF1B,KCNK6	-6192,-6192,-6192,-6031,-6031,-6031,-2204
chr10:48436008-48437794	chr10	+	48436491	48437621	True	NM_004962,NM_153034	chr10,chr10	-,+	GDF10,ZNF488	1567,-81453
chr9:80763758-80764886	chr9	+	80764036	80764542	True	NM_001098802,NM_002072	chr9,chr9	+,-	CEP78,GNAQ	86448,-117817
chr7:139525941-139527592	chr7	+	139526024	139526777	True	NR_029394,NM_001061,NM_022740,NM_030984,NM_001166253	chr7,chr7,chr7,chr7,chr7	+,+,-,+,+	TBXAS1,TBXAS1,HIPK2,TBXAS1,TBXAS1	2174,2174,-48331,2174,2174
chr11:71249135-71250007	chr11	+	71249639	71249935	True	NM_021046,NM_005553,NM_001005405	chr11,chr11,chr11	+,+,-	KRTAP5-8,KRTAP5-9,KRTAP5-11	-619,9530,44036
chr12:118405077-118405499	chr12	+	118405152	118405510	True	NM_173598,NM_001130112	chr12,chr12	-,+	KSR2,RFC5	568,48997
chr7:150724934-150725315	chr7	+	150725050	150725306	True	NM_173681,NM_007188	chr7,chr7	-,+	ATG9B,ABCB8	-3464,203
chr19:35645071-35645287	chr19	+	35645151	35645232	True	NM_014164,NM_144779,NM_139284,NR_028406,NM_001164605	chr19,chr19,chr19,chr19,chr19	+,+,-,+,+	FXYD5,FXYD5,LGI4,FXYD5,FXYD5	392,439,-18973,439,612
chr11:3253114-3253325	chr11	+	3253131	3253329	True	NR_027138,NM_001039165	chr11,chr11	+,-	C11orf36,MRGPRE	-13620,337
chr9:123690770-123691022	chr9	+	123690841	123690905	True	NM_001190945,NR_024408,NM_005658	chr9,chr9,chr9	-,+,-	TRAF1,LOC253039,TRAF1	596,-85572,-1668
chr19:30303954-30305372	chr19	+	30304010	30305410	True	NM_001238,NM_057182,NM_031448	chr19,chr19,chr19	+,+,-	CCNE1,CCNE1,C19orf12	-1160,-500,-97558
chr6:41020220-41021353	chr6	+	41020264	41021332	True	NM_173561,NM_001159726,NM_006789	chr6,chr6,chr6	-,+,+	UNC5CL,TSPO2,APOBEC2	-13326,-9858,-291
chr10:74384185-74385190	chr10	+	74384445	74385219	True	NM_138357,NM_006077,NM_001195518	chr10,chr10,chr10	+,-,-	CCDC109A,CBARA1,CBARA1	66669,780,780
chr7:33137968-33139144	chr7	+	33137985	33139034	True	NM_001033604,NM_203288	chr7,chr7	+,-	BBS9,RP9	30117,10018
chr17:74449500-74450278	chr17	+	74449726	74450244	True	NM_022066,NM_001166579	chr17,chr17	-,+	UBE2O,AANAT	-438,-358
chr14:20117429-20119327	chr22	+	16385517	16386843	False	NM_001005239,NR_001591	chr22,chr22	-,+	OR11H1,psiTPTE22	63012,695957
chr14:20117429-20119327	chr14	+	20117874	20119200	True	NM_001197287,NM_172194	chr14,chr14	-,+	OR11H2,OR4Q3	63342,96386
chr14:20117429-20119327	chr14	-	19446459	19447136	False	NM_001145442,NM_001013354	chr14,chr14	-,+	POTEM,OR11H12	573194,-68917
chr17:7260379-7261477	chr17	+	7260427	7261222	True	NM_032442,NM_198154,NM_001002914	chr17,chr17,chr17	-,+,+	NEURL4,TMEM95,KCTD11	-27789,-1981,-5270
chr17:47044880-47045495	chr17	+	47045072	47045136	True	NM_001160423,NM_004123	chr17,chr17	+,-	IGF2BP1,GIP	29637,869
chrX:128980303-128980906	chrX	+	128980629	128980947	True	NM_001008222,NM_001166221,NM_016032	chrX,chrX,chrX	-,+,-	ZDHHC9,UTP14A,ZDHHC9	-3068,59149,-2719
chr11:106863349-106863609	chr11	+	106863348	106863658	True	NM_001130037,NM_000855	chr11,chr11	+,-	ELMOD1,GUCY1A2	598158,25563
chrX:153533778-153534138	chrX	+	153533811	153533945	True	NM_001205201,NM_001145934,NM_001145933,NM_012253	chrX,chrX,chrX,chrX	-,+,+,+	TEX28,TKTL1,TKTL1,TKTL1	-10247,-453,-9835,-9835
chr1:68515431-68516606	chr1	+	68515901	68516636	True	NM_004675,NM_001924	chr1,chr1	-,+	DIRAS3,GADD45A	73,-365093
chr2:31620296-31620545	chr2	+	31620300	31620521	True	NM_014600,NM_000379	chr2,chr2	+,-	EHD3,XDH	-163471,17141
chr19:49977632-49977861	chr19	+	49977661	49977879	True	NM_001204502,NM_001204503,NM_001459,NM_017916	chr19,chr19,chr19,chr19	+,+,+,-	FLT3LG,FLT3LG,FLT3LG,PIH1D1	-246,-54,-246,-22546
chr17:79936256-79937076	chr17	+	79936447	79937051	True	NM_178493,NM_024083	chr17,chr17	-,+	NOTUM,ASPSCR1	-17390,-1072
chr1:165413321-165414205	chr1	+	165413609	165414251	True	NM_006917,NR_033824,NM_001005214	chr1,chr1,chr1	-,-,+	RXRG,RXRG,LRRC52	391,391,99226
chr20:57210498-57212352	chr20	+	57210725	57212320	True	NM_153360,NM_001001433	chr20,chr20	-,+	APCDD1L,STX16	-120776,13988
chr9:38391670-38392566	chr9	+	38391678	38392505	True	NM_001007563,NM_000692	chr9,chr9	-,+	IGFBPL1,ALDH1B1	31989,196
chrX:101771740-101772032	chrX	+	101771895	101772071	True	NR_002216,NM_021992	chrX,chrX	+,-	NXF4,TMSB15A	32821,-196
chr3:49712162-49712733	chr3	+	49712310	49712686	True	NM_001640,NM_020998	chr3,chr3	+,-	APEH,MST1	-926,13560
chr1:53164097-53164853	chr1	+	53164200	53164627	True	NM_024646,NM_023077	chr1,chr1	+,-	ZYG11B,SELRC1	27503,-162
chr9:34972682-34973075	chr9	+	34972932	34973116	True	NM_007126,NM_015297	chr9,chr9	-,+	VCP,KIAA1045	99673,-14792
chrX:70118748-70119841	chrX	+	70118772	70119413	True	NM_001003811,NM_001170931,NM_031276	chrX,chrX,chrX	-,+,-	TEX11,FOXO4,TEX11	9217,196585,9217
chr13:19980092-19980450	chr13	+	19980314	19980456	True	NR_034026,NR_027248	chr13,chr13	+,-	LOC100287114,ANKRD26P3	-61186,-61201
chr6:96501507-96503487	chr6	+	96501673	96503530	True	NM_001143957,NM_006581	chr6,chr6	-,+	GPR63,FUT9	781877,-37887
chr8:62626874-62627109	chr8	+	62626886	62627142	True	NM_004318,NM_001164756,NM_001164754,NM_001164755,NM_173519,NM_032466	chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,+,-	ASPH,ASPH,ASPH,ASPH,CLVS1,ASPH	107,107,107,107,-426412,107
chr13:96635551-96636790	chr13	+	96635678	96636364	True	NM_153456,NM_020121	chr13,chr13	+,-	HS6ST3,UGGT2	106728,69437
chr4:146097557-146097991	chr4	+	146097859	146098039	True	NM_002940,NM_017493,NM_001102653	chr4,chr4,chr4	+,-,-	ABCE1,OTUD4,OTUD4	-78762,-1963,2843
chr10:118763691-118764199	chr10	+	118763708	118764138	True	NM_018330,NM_181840,NM_001127211	chr10,chr10,chr10	-,+,-	KIAA1598,KCNK18,KIAA1598	1000,192861,1000
chr11:130028441-130029087	chr11	+	130028447	130029103	True	NM_199437,NM_014155,NM_021978	chr11,chr11,chr11	-,-,+	PRDM10,ZBTB44,ST14	-155717,155554,578
chr8:38086022-38087440	chr8	+	38086101	38087488	True	NM_001164232,NM_015214,NM_001164234,NM_001102559	chr8,chr8,chr8,chr8	+,+,+,-	DDHD2,DDHD2,DDHD2,PPAPDC1B	1982,1520,1520,39301
chr7:92140732-92141437	chr7	+	92140924	92141308	True	NM_000466,NM_032120	chr7,chr7	-,+	PEX1,C7orf64	16587,16778
chr2:110969171-110969808	chr2	+	110969242	110969802	True	NM_207181,NM_001128178,NM_001128179,NR_037626,NM_000272	chr2,chr2,chr2,chr2,chr2	-,-,-,+,-	NPHP1,NPHP1,NPHP1,LOC100507334,NPHP1	-6603,-6603,-6603,33412,-6603
chr17:72867224-72868853	chr17	+	72867288	72868700	True	NM_178160,NM_004110,NM_024417	chr17,chr17,chr17	+,-,-	OTOP2,FDXR,FDXR	51669,506,506
chr7:149322335-149322906	chr7	+	149322334	149322839	True	NM_032534,NR_027788,NR_027789	chr7,chr7,chr7	+,-,-	KRBA1,ZNF767,ZNF767	89308,-453,-453
chr11:118889973-118890444	chr11	+	118889984	118890152	True	NM_016146,NM_001028,NR_037429	chr11,chr11,chr11	+,-,+	TRAPPC4,RPS25,MIR3656	-794,-927,-381
chr16:2392942-2394288	chr16	+	2392953	2394178	True	NR_003574,NM_001089	chr16,chr16	+,-	ABCA17P,ABCA3	-2082,-2206
chr9:130923164-130924214	chr9	+	130923192	130924256	True	NM_024112,NM_001131016	chr9,chr9	+,-	C9orf16,CIZ1	-704,29662
chr3:194118304-194118736	chr3	+	194118303	194118719	True	NR_033929,NM_004488	chr3,chr3	+,-	FLJ34208,GP5	89149,1326
chr10:72437230-72437497	chr10	+	72437250	72437436	True	NM_139155,NM_080722,NM_005041	chr10,chr10,chr10	+,+,-	ADAMTS14,ADAMTS14,PRF1	-4742,-4742,-74719
chr1:54200820-54202168	chr1	+	54200983	54202147	True	NM_147193,NM_000792	chr1,chr1	-,+	GLIS1,DIO1	-1106,157713
chrX:148691348-148691837	chrX	+	148691366	148691746	True	NM_001171909,NM_001164415	chrX,chrX	+,-	CXorf40A,HSFX2	-65351,-14392
chr20:1471546-1471776	chr20	+	1471572	1471758	True	NM_014723,NM_001122962,NM_001134836	chr20,chr20,chr20	+,-,-	SNPH,SIRPB2,SIRPB2	-224663,525,525
chr6:170600500-170600796	chr6	+	170600511	170600717	True	NM_032448,NM_005618	chr6,chr6	+,-	FAM120B,DLL1	15126,-814
chr3:48481769-48482208	chr3	+	48482048	48482194	True	NM_024661,NM_130384,NM_015933,NM_032166	chr3,chr3,chr3,chr3	-,+,+,+	CCDC51,ATRIP,CCDC72,ATRIP	-519,6023,-413,6023
chr4:107957292-107958056	chr4	+	107957378	107958004	True	NM_014421,NM_001142416	chr4,chr4	-,+	DKK2,AIMP1	75,-719765
chr6:130033689-130034755	chr6	+	130033723	130034652	True	NM_001007102,NM_033515	chr6,chr6	+,-	L3MBTL3,ARHGAP18	305075,-2353
chr8:70855444-70855682	chr8	+	70855444	70855722	True	NM_001128206,NM_030958	chr8,chr8	+,-	SULF1,SLCO5A1	-450468,-108145
chr17:73007679-73008313	chr17	+	73007797	73008225	True	NM_001545,NM_001003785	chr17,chr17	+,-	ICT1,ATP5H	554,34899
chr5:140346570-140346998	chr5	+	140346622	140347008	True	NM_018899,NM_031883,NM_002109	chr5,chr5,chr5	+,+,-	PCDHAC2,PCDHAC2,HARS	-926,-321,-275651
chr2:71681010-71681240	chr2	+	71681114	71681218	True	NM_001130980,NM_001130981,NM_003494,NM_020459,NM_001130977,NM_001130976,NM_001130979,NM_001130978	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,-,+,+,+,+	DYSF,DYSF,DYSF,PAIP2B,DYSF,DYSF,DYSF,DYSF	-412,-412,-412,-226881,-412,-412,-412,-412
chr3:149375083-149375482	chr3	+	149375092	149375492	True	NM_007282,NM_001168280,NM_015472	chr3,chr3,chr3	+,-,-	RNF13,WWTR1,WWTR1	154982,370,446
chr6:109189713-109190170	chr6	+	109189738	109190154	True	NM_001199934,NM_032131	chr6,chr6	-,+	SESN1,ARMC2	140087,-20183
chr4:155506757-155507507	chr4	+	155506845	155507452	True	NM_021871,NM_005141,NM_000508	chr4,chr4,chr4	-,+,-	FGA,FGB,FGA	4496,-22764,4496
chr17:44254028-44255234	chr17_ctg5_hap1	-	611601	611821	False	NM_001193466,NR_034172	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	KIAA1267,LOC644246	-15504,-16215
chr17:44254028-44255234	chr17_ctg5_hap1	-	1340175	1340395	False	NR_002940,NR_037772	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LRRC37A4,CRHR1	140981,-169722
chr17:44254028-44255234	chr17	+	44254394	44254722	True	NM_001193466,NR_034172	chr17,chr17	-,+	KIAA1267,LOC644246	15504,16216
chr5:72857080-72857446	chr5	+	72857079	72857296	True	NM_023039,NM_032175	chr5,chr5	-,+	ANKRA2,UTP15	4270,4301
chr17:80606909-80607213	chr17	+	80606908	80607072	True	NM_019613,NM_024619	chr17,chr17	-,+	WDR45L,FN3KRP	-497,67509
chr9:135281345-135281573	chr9	+	135281393	135281595	True	NM_007344,NM_207417	chr9,chr9	-,+	TTF1,C9orf171	676,4015
chr11:1142944-1143213	chr11	+	1143127	1143203	True	NM_002457,NM_005961	chr11,chr11	+,-	MUC2,MUC6	-68303,-106421
chr6:15965575-15966378	chr6	+	15965636	15966374	True	NM_013262,NR_036448	chr6,chr6	+,-	MYLIP,DTNBP1	162942,-302347
chr1:18806852-18807527	chr1	+	18806886	18807558	True	NM_152375,NM_152232	chr1,chr1	+,-	KLHDC7A,TAS1R2	-26,378647
chr19:40697631-40697859	chr19	+	40697630	40697783	True	NM_152479,NM_002446	chr19,chr19	-,+	TTC9B,MAP3K10	26573,-30
chr7:95224285-95225552	chr7	+	95224341	95225424	True	NM_016116,NM_002612	chr7,chr7	+,-	ASB4,PDK4	-109185,551
chr17:78010495-78010771	chr17	+	78010508	78010804	True	NM_017950,NM_019020	chr17,chr17	+,-	CCDC40,TBC1D16	-124,-861
chr1:151514600-151515457	chr1	+	151514602	151515503	True	NM_001126337,NM_145796,NM_020127,NR_030280	chr1,chr1,chr1,chr1	+,-,+,+	TUFT1,POGZ,TUFT1,MIR554	-1880,-82661,-1880,2768
chr7:75570198-75570668	chr7	+	75570571	75570685	True	NM_031925,NR_002955	chr7,chr7	-,+	TMEM120A,SNORA14A	53357,2415
chr16:19469828-19470172	chr16	+	19469858	19470194	True	NM_024780,NM_016641	chr16,chr16	+,-	TMC5,GDE1	-2137,63306
chr6:19837190-19837427	chr6	+	19837190	19837358	True	NM_001546,NM_001080480	chr6,chr6	+,-	ID4,MBOAT1	258,375362
chr20:32250815-32251129	chr20	+	32250847	32251091	True	NM_080825,NM_031231,NM_001024675	chr20,chr20,chr20	+,-,+	C20orf144,NECAB3,C20orf134	-806,11223,3212
chr19:58875151-58875390	chr19	+	58875226	58875438	True	NM_198458,NR_015380	chr19,chr19	-,+	ZNF497,A1BG-AS1	-1106,-11951
chr20:10198546-10198820	chr20	+	10198629	10198831	True	NM_130811,NM_018848,NM_003081	chr20,chr20,chr20	+,-,+	SNAP25,MKKS,SNAP25	645,213789,645
chr3:38180715-38181951	chr3	+	38180898	38181984	True	NM_001172566,NM_001172567,NR_024024,NM_001172568,NM_001172569,NM_001130410,NM_001607,NM_002468	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,-,+,+,-,-,+	MYD88,MYD88,ACAA1,MYD88,MYD88,ACAA1,ACAA1,MYD88	-980,-980,-2165,-980,-980,-2165,-2165,-980
chr10:23633054-23633688	chr10	+	23633523	23633715	True	NM_153714,NM_001145373	chr10,chr10	-,+	C10orf67,OTUD1	107,94482
chr16:70680106-70680344	chr16	+	70680140	70680314	True	NM_001172772,NM_138383	chr16,chr16	+,-	IL34,MTSS1L	-22296,39690
chr12:6756676-6757043	chr12	+	6756692	6756765	True	NM_001164094,NM_032489	chr12,chr12	+,-	COPS7A,ACRBP	76384,-112
chr20:61052830-61053231	chr20	+	61052868	61053270	True	NM_001024,NM_080473	chr20,chr20	+,-	RPS21,GATA5	-90798,-1842
chr12:127631281-127631635	chr12	+	127631285	127631407	True	NR_033970,NR_015398	chr12,chr12	-,+	LOC440117,LOC100128554	-272049,-704309
chr2:32291502-32292221	chr2	+	32291989	32292129	True	NM_199436,NM_032574,NM_014946	chr2,chr2,chr2	+,-,+	SPAST,DPY30,SPAST	-3360,-27145,-3360
chr1:45275338-45275837	chr1	+	45275350	45275800	True	NM_001013632,NM_004073,NM_001136537	chr1,chr1,chr1	-,+,+	TCTEX1D4,PLK3,BTBD19	-2393,-9365,-1247
chr7:17060484-17061013	chr7	+	17060666	17061030	True	NM_176813,NM_014399	chr7,chr7	-,+	AGR3,TSPAN13	-139053,-267376
chr16:22519515-22520538	chr16	+	22519825	22520032	True	NM_001135865,NR_027460	chr16,chr16	+,-	LOC100132247,RRN3P3	4811,-70789
chr16:22519515-22520538	chr16	-	21441513	21441720	False	NR_024456,NR_026675,NM_130464	chr16,chr16,chr16	-,+,-	LOC100190986,NCRNA00169,NPIPL3	4106,-129403,-4855
chr16:22519515-22520538	chr16	-	21873791	21873998	False	NM_003366,NR_003370	chr16,chr16	+,-	UQCRC2,RRN3P1	90610,-43296
chr16:22519515-22520538	chr16	-	29521998	29522205	False	NR_002557,NM_177552	chr16,chr16	-,+	LOC613038,SULT1A3	-43099,-50851
chr16:22519515-22520538	chr16	-	30261980	30262187	False	NR_002555,NM_177552	chr16,chr16	-,+	LOC613037,SULT1A3	-5048,-51491
chr12:12222041-12223338	chr12	+	12222130	12223221	True	NM_138722,NM_138723,NM_030766,NM_002336	chr12,chr12,chr12,chr12	+,+,+,-	BCL2L14,BCL2L14,BCL2L14,LRP6	1180,656,1180,196640
chr22:32665479-32666005	chr22	+	32665502	32665890	True	NM_014227,NM_006604	chr22,chr22	-,+	SLC5A4,RFPL3	-14184,84981
chr12:6773946-6774489	chr12	+	6773946	6774412	True	NM_001127586,NM_001164094,NM_001127584,NM_001127585,NM_001127582,NM_001127583,NM_016162	chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,+,-,-,-,-,-	ING4,COPS7A,ING4,ING4,ING4,ING4,ING4	-1638,58737,-1638,-1638,-1638,-1638,-1638
chr1:159924588-159926181	chr1	+	159925009	159925545	True	NM_001135050,NM_033438,NM_001146173,NM_004983,NM_001146172,NM_020789	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,-	IGSF9,SLAMF9,SLAMF9,KCNJ9,SLAMF9,IGSF9	-9623,-965,-965,125814,-965,-9623
chr12:7175809-7176808	chr12	+	7175890	7176712	True	NM_001734,NM_201442,NM_005768	chr12,chr12,chr12	+,+,-	C1S,C1S,LPCAT3	-7961,-7961,-50048
chr13:38438092-38438773	chr13	+	38438231	38438783	True	NM_016179,NM_003306,NM_001135956,NM_001135957,NM_001135955,NM_016617,NM_001135958	chr13,chr13,chr13,chr13,chr13,chr13,chr13	-,-,-,-,-,+,-	TRPC4,TRPC4,TRPC4,TRPC4,TRPC4,UFM1,TRPC4	5210,5210,5210,5210,5210,485158,5210
chr13:50152246-50153479	chr13	+	50152634	50153469	True	NM_138450,NM_018191	chr13,chr13	+,-	ARL11,RCBTB1	48965,6300
chr11:47236930-47238446	chr11	+	47237050	47238468	True	NM_000107,NM_016223	chr11,chr11	+,-	DDB2,PACSIN3	-608,-29040
chr11:71243952-71244912	chr11	+	71244286	71244782	True	NM_021046,NM_001012503,NM_001005405	chr11,chr11,chr11	+,+,-	KRTAP5-8,KRTAP5-7,KRTAP5-11	4288,-6024,49189
chr11:8106544-8107062	chr11	+	8106594	8106918	True	NM_177972,NM_001135109	chr11,chr11	+,-	TUB,RIC3	-3736,83722
chr7:151215594-151216148	chr7	+	151215610	151216091	True	NM_005614,NR_034013	chr7,chr7	-,+	RHEB,LOC100131176	969,-109339
chr2:241835107-241835330	chr2	+	241835112	241835356	True	NM_024861,NM_001085437,NM_000030	chr2,chr2,chr2	-,-,+	C2orf54,C2orf54,AGXT	-3660,267,-27001
chr8:75893548-75894691	chr8	+	75893692	75894670	True	NM_031461,NM_020647	chr8,chr8	+,-	CRISPLD1,JPH1	2037,-660130
chr9:27566698-27567152	chr9	+	27566710	27567183	True	NM_018325,NM_020124,NM_145005	chr9,chr9,chr9	-,+,-	C9orf72,IFNK,C9orf72	6361,-42460,6722
chr13:45148201-45150070	chr13	+	45148290	45150086	True	NM_001010897,NM_183422	chr13,chr13	+,-	SERP2,TSC22D1	-200363,665
chr17:35765935-35766548	chr17	+	35766140	35766501	True	NM_198834,NM_001166105,NM_133439,NM_001488,NM_198839	chr17,chr17,chr17,chr17,chr17	-,+,+,+,-	ACACA,TADA2A,TADA2A,TADA2A,ACACA	452,475,810,810,452
chr14:61794262-61794688	chr14	+	61794315	61794690	True	NM_001017970,NM_006255	chr14,chr14	-,+	TMEM30B,PRKCH	-45785,-5864
chr5:60632504-60632779	chr5	+	60632642	60632831	True	NM_001048249,NM_020928	chr5,chr5	-,+	C5orf43,ZSWIM6	-174340,-4598
chr11:133711649-133712679	chr11	+	133711708	133712590	True	NM_174927,NR_027276	chr11,chr11	-,+	SPATA19,LOC100128239	2852,189576
chr6:38532590-38534275	chr6	+	38532764	38534301	True	NM_001172418,NM_001371	chr6,chr6	-,+	BTBD9,DNAH8	29592,156250
chr1:53704623-53705667	chr1	+	53704638	53705278	True	NM_000098,NM_002370	chr1,chr1	+,-	CPT2,MAGOH	-42588,-356
chr12:93855788-93856789	chr12	+	93856171	93856786	True	NM_003348,NM_014050,NM_172177,NM_172178	chr12,chr12,chr12,chr12	-,+,+,+	UBE2N,MRPL42,MRPL42,MRPL42	-20145,4483,4483,4483
chr11:17296236-17297970	chr11	+	17296440	17297850	True	NM_002645,NM_005013	chr11,chr11	-,+	PIK3C2A,NUCB2	-105086,435
chr10:134002924-134003254	chr10	+	134002930	134003298	True	NM_006426,NM_173575	chr10,chr10	+,-	DPYSL4,STK32C	-2570,118229
chr1:26439837-26440423	chr1	+	26440157	26440437	True	NR_026685,NR_026686,NM_032588,NM_152835	chr1,chr1,chr1,chr1	+,+,-,+	PDIK1L,PDIK1L,TRIM63,PDIK1L	-2559,-1947,-46036,-1947
chr1:161475055-161476378	chr1	+	161475069	161476031	True	NM_000569,NM_021642,NM_001136219	chr1,chr1,chr1	-,+,+	FCGR3A,FCGR2A,FCGR2A	43837,78,78
chr10:86320715-86321555	chr10	+	86320956	86321244	True	NM_018999,NM_015613	chr10,chr10	+,-	FAM190B,LRIT1	-232598,-319739
chrX:152993068-152994976	chrX	+	152993271	152994797	True	NM_001139441,NM_001139457,NM_000033,NM_005745,NR_024450	chrX,chrX,chrX,chrX,chrX	-,-,+,-,-	BCAP31,BCAP31,ABCD1,BCAP31,BCAP31	-3689,-3722,-3000,-3433,-3070
chrX:137908430-137910118	chrX	+	137908480	137909842	True	NR_028597,NM_001139502	chrX,chrX	+,-	SRD5A1P1,FGF13	619135,39925
chr16:74348294-74349931	chr16	+	74348423	74349822	True	NR_026950,NM_002811	chr16,chr16	-,+	LOC283922,PSMD7	52382,-17801
chr1:151735578-151735927	chr1	+	151735605	151735839	True	NM_016178,NM_001134939,NM_031420	chr1,chr1,chr1	+,+,-	OAZ3,OAZ3,MRPL9	3291,-211,251
chr3:48414974-48416091	chr3	+	48415127	48415470	True	NM_001159929,NM_207102,NM_001080525,NM_001159927	chr3,chr3,chr3,chr3	+,+,-,+	FBXW12,FBXW12,SPINK8,FBXW12	-1469,-1469,-45296,-1469
chr3:33259741-33260082	chr3	+	33259745	33260081	True	NM_012157,NM_015551	chr3,chr3	+,-	FBXL2,SUSD5	58852,676
chr5:78279169-78279880	chr5	+	78279185	78279783	True	NM_000046,NM_001178005,NM_198709	chr5,chr5,chr5	-,+,-	ARSB,BHMT2,ARSB	2624,85763,2033
chr5:66478383-66479254	chr5	+	66478473	66479289	True	NM_015183,NM_005582	chr5,chr5	+,-	MAST4,CD180	-353920,13378
chr15:75073316-75073871	chr15	+	75073426	75073814	True	NM_000499,NM_001127190,NM_004383	chr15,chr15,chr15	-,+,+	CYP1A1,CSK,CSK	-55549,610,610
chr7:128553888-128555198	chr7	+	128554072	128555215	True	NM_199349,NM_001098629,NM_001135914	chr7,chr7,chr7	-,+,-	KCP,IRF5,KCP	-3299,22778,-3299
chr21:44299776-44300003	chr21	+	44299821	44299996	True	NM_018669,NM_033661,NM_001001503	chr21,chr21,chr21	-,-,+	WDR4,WDR4,NDUFV3	-143,-143,13381
chr1:147228743-147230148	chr1	+	147228921	147230049	True	NM_005267,NM_181703	chr1,chr1	+,-	GJA8,GJA5	144896,2715
chr19:47631254-47632036	chr19	+	47631571	47631671	True	NR_027280,NM_015168,NM_001145714,NM_001145713,NM_005500	chr19,chr19,chr19,chr19,chr19	+,-,+,+,+	SAE1,ZC3H4,SAE1,SAE1,SAE1	2443,-14562,2408,2408,2408
chr11:66623063-66623622	chr11	+	66623091	66623479	True	NM_024036,NM_022172	chr11,chr11	+,-	LRFN4,PC	1396,51911
chr4:87927396-87927953	chr4	+	87927469	87927919	True	NM_144645,NM_005935	chr4,chr4	-,+	C4orf36,AFF1	-113894,233
chr17:7210724-7211115	chr17	+	7210724	7211098	True	NM_001970,NM_001143760,NM_001143762,NM_004489,NM_001143761	chr17,chr17,chr17,chr17,chr17	+,+,+,-,+	EIF5A,EIF5A,EIF5A,GPS2,EIF5A	-63,-457,595,7610,189
chr3:186647683-186647958	chr3	+	186647810	186648004	True	NM_181573,NM_173217,NM_173216	chr3,chr3,chr3	-,+,+	RFC4,ST6GAL1,ST6GAL1	-123326,310,310
chr15:85522405-85522937	chr15	+	85522426	85522952	True	NM_173454,NM_014300,NM_002605	chr15,chr15,chr15	+,-,+	PDE8A,SEC11A,PDE8A	2252,-262752,2252
chr4:153299874-153301570	chr4	+	153300243	153301591	True	NR_033797,NM_001013415	chr4,chr4	+,-	DKFZP434I0714,FBXW7	155824,2134
chr20:37063312-37063632	chr20	+	37063345	37063515	True	NR_015366,NR_002910,NR_002911,NR_003239,NR_003017,NR_027241,NR_003018	chr20,chr20,chr20,chr20,chr20,chr20,chr20	-,-,-,+,-,-,-	LOC388796,SNORA71B,SNORA71A,SNHG11,SNORA71C,LOC388796,SNORA71D	497,-9367,-7259,11781,-4898,553,-703
chr11:32601391-32601814	chr11	+	32601579	32601859	True	NM_024426,NM_006360	chr11,chr11	-,+	WT1,EIF3M	-144498,3531
chr1:247268544-247268880	chr1	+	247268593	247268916	True	NM_024804,NM_001142572,NM_207401,NM_173858	chr1,chr1,chr1,chr1	-,-,-,+	ZNF669,ZNF669,C1orf229,VN1R5	-919,-919,6853,150457
chr16:31213763-31214024	chr16	+	31213778	31213990	True	NM_145182,NM_001008274,NM_013258	chr16,chr16,chr16	-,+,-	PYCARD,TRIM72,PYCARD	157,11351,157
chr12:45596263-45596724	chr12	+	45596280	45596763	True	NR_037144,NM_001025356	chr12,chr12	-,+	PLEKHA8P1,ANO6	13076,13006
chr3:193923524-193923887	chr3	+	193923539	193923869	True	NR_024480,NM_005524	chr3,chr3	-,+	LOC100131551,HES1	106774,-69659
chr10:23002326-23002596	chr10	+	23002453	23002543	True	NM_005028,NM_173081	chr10,chr10	-,+	PIP4K2A,ARMC3	1010,214410
chr17:43129232-43129468	chr17	+	43129242	43129496	True	NM_021079,NM_001128631,NM_024819	chr17,chr17,chr17	+,-,-	NMT1,DCAKD,DCAKD	9183,-264,9027
chr8:20054287-20054784	chr8	+	20054352	20054610	True	NM_001693,NM_003053	chr8,chr8	+,-	ATP6V1B2,SLC18A1	93,-13635
chr7:73870935-73872331	chr7	+	73871026	73872210	True	NM_016328,NM_001199207,NM_005685,NM_181471	chr7,chr7,chr7,chr7	+,+,+,-	GTF2IRD1,GTF2IRD1,GTF2IRD1,RFC2	-2957,-2957,-2957,-202288
chr22:25090986-25091726	chr22	+	25090992	25091492	True	NR_024593,NR_024494	chr22,chr22	-,+	POM121L10P,BCRP3	-35878,-62161
chr12:46661890-46662285	chr12	+	46661937	46662261	True	NM_001077484,NM_030674,NM_152641	chr12,chr12,chr12	-,-,+	SLC38A1,SLC38A1,ARID2	997,997,-538368
chr12:102873565-102875299	chr12	+	102873619	102875275	True	NM_001111284,NM_001111285,NM_017915,NM_000618,NM_001111283	chr12,chr12,chr12,chr12,chr12	-,-,+,-,-	IGF1,IGF1,C12orf48,IGF1,IGF1	-1190,107,-359724,107,107
chr6:43019977-43020476	chr6	+	43019983	43020477	True	NM_015950,NM_001168370,NM_014780,NM_201521,NM_201523,NM_201522,NM_138343	chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,+,+,+,+	MRPL2,CUL7,CUL7,KLC4,KLC4,KLC4,KLC4	6815,1256,1256,6894,7151,7704,6894
chr1:185104402-185105395	chr1	+	185104668	185105268	True	NM_030934,NM_001105518	chr1,chr1	-,+	TRMT1L,SWT1	20898,20923
chrX:120090147-120090476	chrX	+	120090315	120090469	True	NM_012084,NM_001080139,NM_001080138,NM_001080137,NM_173571,NM_001080146,NM_001080144,NM_001080145,NM_001080142,NM_001080143,NM_001080140,NM_001080141	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,-,-,-,-,-,-,-,-,-,-,-	GLUD2,CT47A8,CT47A9,CT47A10,CT47A11,CT47A1,CT47A3,CT47A2,CT47A5,CT47A4,CT47A7,CT47A6	90992,-4721,-4721,-4721,-4721,-4721,-4721,-4721,-4721,-4721,35,-4721
chrX:120090147-120090476	chrX	+	120009640	120009794	False	NM_012084,NM_001145718	chrX,chrX	+,-	GLUD2,CT47B1	171667,35
chr15:66860377-66860989	chr15	+	66860430	66860734	True	NM_207338,NR_003105	chr15,chr15	-,+	LCTL,ZWILCH	-2595,-63050
chr8:73916525-73918063	chr8	+	73916721	73917539	True	NM_003218,NM_153225,NM_017489	chr8,chr8,chr8	+,-,+	TERF1,C8orf84,TERF1	3557,88020,3557
chr1:14076399-14077420	chr1	+	14076564	14077267	True	NM_001007257,NM_001010847	chr1,chr1	+,-	PRDM2,LRRC38	-746,-236322
chr10:69590800-69591825	chr10	+	69591217	69591728	True	NM_201262,NM_021800,NM_012238	chr10,chr10,chr10	-,-,+	DNAJC12,DNAJC12,SIRT1	6278,6278,52698
chr3:197877813-197879388	chr7	-	37409	37459	True	NM_002607,NM_020223	chr7,chr7	-,+	PDGFA,FAM20C	522072,155509
chr1:150523201-150523437	chr1	+	150523404	150523472	True	NM_019032,NM_001197320,NM_025008,NR_036211	chr1,chr1,chr1,chr1	+,-,+,+	ADAMTSL4,MCL1,ADAMTSL4,MIR4257	-1557,28792,-1557,932
chr20:50417709-50417970	chr20	+	50417713	50417957	True	NM_020436,NM_014484	chr20,chr20	-,+	SALL4,MOCS3	1141,-842401
chr1:20919271-20920616	chr1	+	20919738	20920573	True	NM_001785,NM_005216	chr1,chr1	+,-	CDA,DDOST	-4345,67514
chr7:102389514-102389796	chr7	+	102389517	102389819	True	NM_032959,NR_026879,NM_001145269,NM_001145268	chr7,chr7,chr7,chr7	-,+,+,+	POLR2J2,FAM185A,FAM185A,FAM185A	-77335,-169,-169,-169
chr7:102389514-102389796	chr7	-	76751482	76751570	False	NM_020879,NM_006682	chr7,chr7	+,-	CCDC146,FGL2	363,77630
chr9:137807095-137807432	chr9	+	137807126	137807334	True	NM_015837,NM_002003	chr9,chr9	+,-	FCN2,FCN1	-34519,2522
chr8:144514912-144515938	chr8	+	144515231	144515923	True	NM_201589,NM_052924	chr8,chr8	-,+	MAFA,RHPN1	-2629,-64257
chr14:106436526-106436921	chr14	+	106436710	106436830	True	NR_026800	chr14	+	KIAA0125	-52923
chr10:50724497-50725883	chr10	+	50724499	50725486	True	NM_020984,NM_170753	chr10,chr10	+,-	CHAT,PGBD3	91654,6925
chr16:30209881-30210087	chr16	+	30209900	30209962	True	NM_177552,NR_037608,NR_037609,NM_001017390,NM_001014999,NR_002556,NM_001015000,NM_024044,NM_001031827,NR_002454,NM_001039182,NR_002557,NM_178044	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,-,+,+,-,+,-,-,+	SULT1A3,SLX1A-SULT1A3,SLX1B-SULT1A4,SULT1A4,SLX1A,LOC388242,SLX1A,SLX1B,BOLA2,LOC606724,BOLA2B,LOC613038,SLX1B	586,-4197,-4197,586,-4787,8336,-4787,-4787,-4273,-9946,-4273,8336,-4787
chr16:30209881-30210087	chr16	+	29470558	29470620	False	NM_177552,NR_037608,NR_037609,NM_001017390,NM_001014999,NR_002556,NM_001015000,NM_024044,NM_001031827,NR_002454,NM_001039182,NR_002557,NM_178044	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,-,+,+,-,+,-,-,+	SULT1A3,SLX1A-SULT1A3,SLX1B-SULT1A4,SULT1A4,SLX1A,LOC388242,SLX1A,SLX1B,BOLA2,LOC606724,BOLA2B,LOC613038,SLX1B	586,-4197,-4197,586,-4787,8329,-4787,-4787,-4273,-9943,-4273,8329,-4787
chr1:16483692-16485152	chr1	+	16483704	16484920	True	NM_001165945,NM_004431	chr1,chr1	+,-	CLCNKB,EPHA2	-108471,-1122
chr6:165598315-165599999	chr6	+	165598653	165599989	True	NM_144980,NR_027284	chr6,chr6	-,+	C6orf118,LOC441177	123172,801049
chr12:107351305-107352799	chr12	+	107351339	107352825	True	NM_001033050,NM_152261	chr12,chr12	-,+	MTERFD3,C12orf23	28161,-1854
chr6:28247670-28249197	chr6	+	28247931	28249103	True	NM_032507,NM_001184743,NM_019110	chr6,chr6,chr6	+,+,-	PGBD1,PGBD1,ZKSCAN4	210,210,-27929
chr11:35976649-35977793	chr11	+	35976878	35977708	True	NM_174902,NM_001101653	chr11,chr11	+,-	LDLRAD3,COMMD9	-11325,333349
chr9:116224563-116225450	chr9	+	116224644	116225498	True	NM_017443,NM_017790	chr9,chr9	-,+	POLE3,RGS3	-51615,510
chr7:1608741-1609151	chr7	+	1608772	1608980	True	NR_021487,NR_027328,NM_032302,NM_001134340,NR_027329	chr7,chr7,chr7,chr7,chr7	+,+,-,-,+	KIAA1908,KIAA1908,PSMG3,PSMG3,KIAA1908	728,728,699,738,728
chr17:4710813-4711282	chr17	+	4710912	4711330	True	NM_002663,NM_182566	chr17,chr17	+,-	PLD2,VMO1	-542,-21183
chr6:34435815-34436623	chr6	+	34435950	34436482	True	NM_001204091,NM_020804	chr6,chr6	-,+	RPS10,PACSIN1	-42048,-2148
chr2:136594397-136594905	chr2	+	136594472	136594880	True	NM_002299,NM_014607	chr2,chr2	-,+	LCT,UBXN4	10,-95334
chr15:40864092-40865745	chr15	+	40864145	40865688	True	NM_052849,NM_001080792,NM_001080791,NM_152260	chr15,chr15,chr15,chr15	-,-,-,+	C15orf57,C15orf57,C15orf57,RPUSD2	-6893,-6893,-6893,-2659
chr20:30539913-30540609	chr20	+	30539991	30540339	True	NM_030815,NM_001011718	chr20,chr20	-,+	PDRG1,XKR7	-108,15465
chr7:96653891-96654126	chr7	+	96653907	96654173	True	NM_005221,NM_005222	chr7,chr7	-,+	DLX5,DLX6	20,-18668
chr16:30133818-30134276	chr16	+	30133838	30134300	True	NM_002746,NM_001109891,NR_027081,NM_001040056,NM_024307	chr16,chr16,chr16,chr16,chr16	-,-,+,-,-	MAPK3,MAPK3,LOC100271831,MAPK3,GDPD3	380,380,-8456,380,-8960
chr14:77935697-77937263	chr14	+	77935808	77937257	True	NM_022067,NM_012111	chr14,chr14	-,+	VIPAR,AHSA1	-11825,-11487
chr12:113659920-113661642	chr12	+	113660032	113661305	True	NM_138451,NM_017901,NM_001143819	chr12,chr12,chr12	-,+,+	IQCD,TPCN1,TPCN1	-1152,-823,-823
chr5:140563257-140563748	chr5	+	140563260	140563479	True	NM_019120,NM_020957,NM_018930,NM_019119,NM_031947	chr5,chr5,chr5,chr5,chr5	+,+,+,+,-	PCDHB8,PCDHB16,PCDHB10,PCDHB9,SLC25A2	-5881,-2331,8472,3413,120184
chr19:9237562-9239049	chr19	+	9237587	9239099	True	NM_001190791,NM_001001958	chr19,chr19	+,-	ZNF317,OR7G3	11956,39
chr3:12802480-12802905	chr3	+	12802555	12802823	True	NM_001162499,NM_018306	chr3,chr3	+,-	CAND2,TMEM40	35347,-1747
chr2:160632657-160633347	chr2	+	160632668	160633172	True	NM_022826,NM_001198763	chr2,chr2	+,-	MARCH7,CD302	-63716,21651
chr7:22743043-22744940	chr7	+	22743682	22743842	True	NM_000600,NM_019059	chr7,chr7	+,-	IL6,TOMM7	22923,118629
chr1:32170869-32171297	chr1	+	32171186	32171256	True	NM_001856,NM_001525	chr1,chr1	-,+	COL16A1,HCRTR1	-1418,-87943
chr12:109578794-109580462	chr12	+	109579119	109580345	True	NM_001093,NM_001205180	chr12,chr12	+,-	ACACB,ALKBH2	-1968,-47826
chr10:112833911-112835784	chr10	+	112834292	112835500	True	NR_026715,NM_000681	chr10,chr10	-,+	RPL13AP6,ADRA2A	-137279,1289
chr7:50628839-50629171	chr7	+	50628934	50629184	True	NM_000790,NM_001082971,NR_033845	chr7,chr7,chr7	-,-,+	DDC,DDC,LOC100129427	-166,4020,-29528
chr5:140778544-140778927	chr5	+	140778544	140778928	True	NM_018925,NM_032100,NM_018921,NM_032099,NM_032088,NM_032089,NM_018926,NM_005642,NM_014004	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,+,-,+	PCDHGB5,PCDHGB6,PCDHGA9,PCDHGB5,PCDHGA8,PCDHGA9,PCDHGB6,TAF7,PCDHGA8	-905,8841,3591,-905,-7117,3591,8841,-78193,-7117
chr16:16424969-16425431	chr16	+	16424984	16425342	True	NR_036447,NM_001079528	chr16,chr16	+,-	PKD1P1,ABCC6	-13569,-107656
chr16:16424969-16425431	chr16	-	18431083	18431135	False	NR_036142,NR_003569	chr16,chr16	-,+	MIR3180-2,ABCC6P1	65039,151434
chr16:16424969-16425431	chr16	-	18471087	18471445	False	NR_036142,NR_003569	chr16,chr16	-,+	MIR3180-2,ABCC6P1	24729,111124
chr16:16424969-16425431	chr16	+	16468485	16468537	False	NR_036447,NM_001079528	chr16,chr16	+,-	PKD1P1,ABCC6	-57070,-151157
chr16:16424969-16425431	chr16	+	15026497	15026855	False	NR_023387,NM_006985	chr16,chr16	-,+	ABCC6P2,NPIP	-107938,4444
chr11:9629769-9630026	chr11	+	9629907	9630003	True	NR_036539,NM_001143976	chr11,chr11	-,+	LOC644656,WEE1	-147662,-33731
chr14:105156486-105156940	chr14	+	105156508	105156988	True	NM_207379,NM_032714,NM_001031714,NM_022489	chr14,chr14,chr14,chr14	-,+,+,+	TMEM179,INF2,INF2,INF2	-85411,-616,-616,-616
chr5:60687715-60688431	chr5	+	60687756	60688344	True	NM_001048249,NM_020928	chr5,chr5	-,+	C5orf43,ZSWIM6	-229454,-59707
chr6:165437596-165438430	chr6	+	165437799	165438266	True	NM_144980,NR_027284	chr6,chr6	-,+	C6orf118,LOC441177	284896,962772
chr1:36554940-36555170	chr1	+	36554988	36555198	True	NM_017825,NM_005202,NM_014466	chr1,chr1,chr1	+,-,+	ADPRHL2,COL8A2,TEKT2	-586,10702,-5363
chr17:39039255-39040068	chr17	+	39039593	39040089	True	NM_019010,NM_001195386	chr17,chr17	-,+	KRT20,TMEM99	1456,-64207
chr13:99622850-99623681	chr13	+	99622877	99623569	True	NM_001144072,NM_001130050,NM_001130048	chr13,chr13,chr13	+,-,-	UBAC2,DOCK9,DOCK9	229109,6819,6819
chr15:51212888-51213158	chr15	+	51212890	51212984	True	NM_032802,NM_007347	chr15,chr15	-,+	SPPL2A,AP4E1	-154980,-11995
chr14:24107506-24108090	chr14	+	24107631	24108020	True	NM_032452,NM_005794,NM_182908	chr14,chr14,chr14	-,+,+	JPH4,DHRS2,DHRS2	-59622,-2109,-2109
chr11:47736347-47736764	chr11	+	47736398	47736664	True	NM_024783,NM_001164379	chr11,chr11	-,+	AGBL2,FAM180B	-96,-128219
chr4:121993720-121994149	chr4	+	121993997	121994153	True	NM_024574,NR_024365	chr4,chr4	-,+	C4orf31,LOC100192379	-324,691586
chr7:114569835-114570426	chr7	+	114569929	114570439	True	NM_002711,NM_001166346,NM_001166345,NM_199072	chr7,chr7,chr7,chr7	-,+,+,+	PPP1R3A,MDFIC,MDFIC,MDFIC	-1010847,-7772,-7772,-7772
chr11:119068720-119069224	chr11	+	119068748	119069240	True	NM_001145018,NM_005188	chr11,chr11	-,+	CCDC153,CBL	-2164,7749
chr19:49776842-49777797	chr19	+	49776916	49777501	True	NM_001040031,NR_036209	chr19,chr19	+,-	CD37,MIR4324	61175,34683
chr7:51387788-51389747	chr7	+	51388067	51389750	True	NM_015198,NR_033845	chr7,chr7	-,+	COBL,LOC100129427	-3552,-788667
chr9:124919963-124920286	chr9	+	124920002	124920160	True	NM_198469,NM_014222	chr9,chr9	+,-	MORN5,NDUFA8	2029,1988
chr2:239228895-239229153	chr2	+	239228974	239229202	True	NM_015650,NM_022817,NM_001139490	chr2,chr2,chr2	+,-,+	TRAF3IP1,PER2,TRAF3IP1	-8,-31767,-8
chr1:19636911-19637634	chr1	+	19637183	19637609	True	NM_003689,NM_001040125,NM_001040126,NM_017765	chr1,chr1,chr1,chr1	-,+,+,+	AKR7A2,PQLC2,PQLC2,PQLC2	1081,1130,1130,1130
chr18:599870-601362	chr18	+	600068	601366	True	NM_014410,NM_001012716	chr18,chr18	+,-	CLUL1,C18orf56	-3123,57024
chr2:242499811-242500386	chr2	+	242499899	242500397	True	NR_033346,NM_032515	chr2,chr2	-,+	BOK-AS1,BOK	-1341,-1758
chr6:42784205-42784472	chr6	+	42784319	42784479	True	NM_003192,NM_015349	chr6,chr6	-,+	TBCC,KIAA0240	-70435,4314
chrX:129401047-129402221	chrX	+	129401314	129402173	True	NM_017666,NM_003951	chrX,chrX	-,+	ZNF280C,SLC25A14	799,71873
chr10:50505047-50506147	chr10	+	50505143	50506133	True	NM_001080520,NM_199459,NM_001135196	chr10,chr10,chr10	-,+,+	DRGX,C10orf71,C10orf71	93824,1053,1053
chr21:45707431-45707909	chr21	+	45707430	45707934	True	NM_175867,NM_000658,NM_000383	chr21,chr21,chr21	-,+,+	DNMT3L,AIRE,AIRE	-25331,2339,-1718
chr21:19758151-19759127	chr21	+	19758386	19758997	True	NM_002772,NM_001204174	chr21,chr21	-,+	TMPRSS15,CHODL	17030,-140256
chr11:8702973-8703886	chr11	+	8703154	8703904	True	NM_000990,NR_002977,NM_014818,NR_002580	chr11,chr11,chr11,chr11	+,+,-,+	RPL27A,SNORA45,TRIM66,SNORA3	90,3081,-22771,1869
chr6:132822572-132823101	chr6	+	132822572	132823148	True	NM_003569,NM_175057	chr6,chr6	-,+	STX7,TAAR9	11239,36278
chr5:137090687-137091277	chr5	+	137090771	137090950	True	NM_006805,NR_002713	chr5,chr5	-,+	HNRNPA0,NPY6R	-732,45931
chr16:68344799-68345145	chr16	+	68344801	68345131	True	NM_032178,NM_019023,NM_001184824	chr16,chr16,chr16	-,+,+	SLC7A6OS,PRMT7,PRMT7	67,25,25
chr5:31794666-31795038	chr5	+	31794918	31795058	True	NR_036241,NM_178140	chr5,chr5	-,+	MIR4279,PDZD2	141257,3972
chr19:55771624-55772535	chr19	+	55771752	55772529	True	NM_032430,NM_014931	chr19,chr19	+,-	BRSK1,PPP6R1	23004,-1714
chr11:118090399-118090740	chr11	+	118090402	118090770	True	NM_001098526,NM_153206,NM_000733	chr11,chr11,chr11	-,-,+	AMICA1,AMICA1,CD3E	5089,-6328,84524
chr1:16165413-16166473	chr1	+	16165543	16166055	True	NR_024279,NM_015001	chr1,chr1	-,+	FLJ37453,SPEN	8643,8303
chrX:56786596-56787039	chrX	+	56786641	56786745	True	NR_015367,NR_002308	chrX,chrX	+,-	LOC550643,LOC442454	-30974,-22624
chr20:44486422-44486672	chr20	+	44486479	44486625	True	NM_005469,NR_037628,NM_080752	chr20,chr20,chr20	-,+,+	ACOT8,ZSWIM3,ZSWIM3	-431,-310,-310
chrX:151928590-151929663	chrX	+	151928829	151929691	True	NM_001129826,NM_005361,NM_175742,NM_005362,NM_001129828,NM_175743,NM_153488,NM_004909,NM_001080848	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,-,-,-,+,-,-,+,+	CSAG3,MAGEA2,MAGEA2,MAGEA3,CSAG3,MAGEA2,MAGEA2B,CSAG2,CSAG2	-1072,-6465,-6465,8599,-1149,-6465,-8730,-1149,-1149
chrX:151928590-151929663	chrX	-	151895472	151895529	False	NM_001166387,NM_001166386,NM_001102576,NM_005367,NM_153478	chrX,chrX,chrX,chrX,chrX	-,-,+,-,+	MAGEA12,MAGEA12,CSAG1,MAGEA12,CSAG1	7712,7629,7698,7712,7698
chrX:151928590-151929663	chrX	-	151875789	151876651	False	NM_001129826,NM_005361,NM_175742,NM_005363,NM_001129828,NM_175743,NM_153488,NM_175868,NM_004909,NM_001080848	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,-,+,+,+,-,-	CSAG3,MAGEA2,MAGEA2,MAGEA6,CSAG3,MAGEA2,MAGEA2B,MAGEA6,CSAG2,CSAG2	1072,6467,6467,-8595,1149,6467,8732,-8595,1149,1149
chr16:78134172-78135035	chr16	+	78134587	78134799	True	NM_199355,NM_016373,NM_130791,NM_130844	chr16,chr16,chr16,chr16	-,+,+,+	ADAMTS18,WWOX,WWOX,WWOX	-665576,-1087,-1087,-1087
chr8:18036572-18037502	chr8	+	18036710	18037504	True	NM_004315,NM_001160179	chr8,chr8	-,+	ASAH1,NAT1	-94203,-8790
chr15:53092939-53093150	chr15	+	53092969	53093105	True	NM_004498,NM_002748	chr15,chr15	-,+	ONECUT1,MAPK6	-10760,-781609
chr12:110210088-110210316	chr12	+	110210093	110210374	True	NR_026662,NM_032829,NR_026661	chr12,chr12,chr12	-,+,-	MGC14436,C12orf34,MGC14436	977,-57958,974
chr15:41056844-41058253	chr15	+	41056852	41058143	True	NM_018145,NM_001130448,NM_005258	chr15,chr15,chr15	-,+,+	FAM82A2,C15orf62,GCHFR	-9394,4015,-618
chr7:94134810-94135845	chr7	+	94135013	94135861	True	NM_001099400,NM_022900	chr7,chr7	-,+	SGCE,CASD1	149717,3308
chr15:74284711-74286074	chr15	+	74285152	74286040	True	NM_004809,NM_033238,NM_033239,NM_033250,NM_002675,NM_033247,NM_033246,NM_033244,NM_033240,NM_033249	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,+,+,+,+,+,+,+,+,+	STOML1,PML,PML,PML,PML,PML,PML,PML,PML,PML	-517,973,973,973,973,973,973,973,973,973
chr7:27280647-27281962	chr7	+	27280786	27281977	True	NM_001989,NM_000522	chr7,chr7	+,-	EVX1,HOXA13	186,-41061
chr1:110089551-110090753	chr1	+	110089589	110090732	True	NM_006496,NM_031936,NM_020703	chr1,chr1,chr1	+,+,-	GNAI3,GPR61,AMIGO1	453,-7147,-37253
chr2:172750926-172752788	chr2	+	172751119	172752623	True	NM_003705,NM_003642	chr2,chr2	-,+	SLC25A12,HAT1	-306,26311
chr22:39930496-39930810	chr22	+	39930620	39930798	True	NM_182810,NM_194326	chr22,chr22	+,-	ATF4,RPS19BP1	-14102,-1760
chr16:67281720-67282369	chr16	+	67281725	67282213	True	NM_013241,NM_004594	chr16,chr16	-,+	FHOD1,SLC9A5	-300,641
chr4:120053354-120054707	chr4	+	120053408	120054674	True	NM_016599,NM_001001701	chr4,chr4	+,-	MYOZ2,C4orf3	2264,167352
chr17:72365326-72365543	chr17	+	72365484	72365544	True	NM_181790,NM_001080466	chr17,chr17	+,-	GPR142,BTBD17	-1890,-7526
chr22:20257799-20258055	chr22	+	20257889	20258099	True	NM_023004,NR_026919	chr22,chr22	-,+	RTN4R,LOC150197	-2073,-64085
chr17:8265570-8266872	chr17	+	8265746	8266629	True	NM_213597,NM_153007,NR_024447	chr17,chr17,chr17	-,+,-	KRBA2,ODF4,LOC100128288	8288,-22609,-1887
chr16:28966172-28967421	chr16	+	28966213	28967391	True	NM_024816,NM_032815	chr16,chr16	-,+	RABEP2,NFATC2IP	-29681,-3946
chr8:23146561-23146773	chr8	+	23146563	23146709	True	NM_001136108,NM_003844	chr8,chr8	+,-	R3HCC1,TNFRSF10A	-1003,-63883
chr2:62081267-62082174	chr2	+	62081369	62082007	True	NR_037710,NM_032180,NM_001201543,NM_152516	chr2,chr2,chr2,chr2	-,-,-,+	FAM161A,FAM161A,FAM161A,COMMD1	-91,-91,-91,50795
chr16:80579361-80580579	chr16	+	80579424	80580633	True	NM_152342,NM_130897	chr16,chr16	-,+	CDYL2,DYNLRB2	257600,-4621
chr8:116011001-116012374	chr8	+	116011008	116012278	True	NM_014112,NM_032334	chr8,chr8	-,+	TRPS1,UTP23	669000,1766463
chr2:188314497-188314878	chr2	+	188314497	188314660	True	NM_005795,NM_177454	chr2,chr2	-,+	CALCRL,FAM171B	-1476,-755760
chr3:129118331-129118659	chr3	+	129118474	129118696	True	NR_003111,NM_018262,NR_002992	chr3,chr3,chr3	-,+,-	RPL32P3,IFT122,SNORA7B	-192,40271,-2283
chr17:8027906-8028120	chr17	+	8027914	8028168	True	NM_001165967,NR_036201,NM_021628,NM_001165960,NM_032580	chr17,chr17,chr17,chr17,chr17	-,+,-,-,-	HES7,MIR4314,ALOXE3,ALOXE3,HES7	-504,-36591,-6054,-5680,-504
chr2:223162664-223162879	chr2	+	223162679	223162928	True	NM_013942,NM_153038,NM_181458,NM_001127366,NM_181459,NM_181457,NM_000438,NM_181461,NM_181460	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	-,+,-,-,-,-,-,-,-	PAX3,CCDC140,PAX3,PAX3,PAX3,PAX3,PAX3,PAX3,PAX3	838,-26,838,838,838,838,838,838,838
chr1:60540064-60541464	chr1	+	60540247	60541502	True	NM_015888,NM_152377	chr1,chr1	+,-	HOOK1,C1orf87	-259778,-805
chr19:20999103-20999570	chr19	+	20999240	20999571	True	NR_034060,NM_145297	chr19,chr19	+,-	ZNF85,ZNF626	106487,-154838
chr19:15618819-15619256	chr19	+	15618944	15619136	True	NM_173483,NM_052890	chr19,chr19	+,-	CYP4F22,PGLYRP2	199,-28629
chr17:19091589-19091827	chr17	+	19091593	19091769	True	NM_006613,NM_001102664	chr17,chr17	-,+	GRAP,EPN2	-141257,48920
chr17:19091589-19091827	chr17	-	19093117	19093293	False	NM_006613,NM_001102664	chr17,chr17	-,+	GRAP,EPN2	-142781,47396
chr17:19091589-19091827	chr17	-	19015507	19015672	False	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	15109,-65171
chr17:19091589-19091827	chr17	+,-	18965501	18967143	False	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	63638,-15165
chr3:9789529-9790194	chr3	+	9789763	9790181	True	NM_016826,NM_016827,NM_016820,NM_016821,NM_016828,NM_016829,NM_016819,NM_003656,NM_002542	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,+,+,+,-,+	OGG1,OGG1,OGG1,OGG1,OGG1,OGG1,OGG1,CAMK1,OGG1	1446,1446,1446,1446,1446,1446,1446,21537,1446
chr14:95784785-95785087	chr14	+	95784826	95785132	True	NR_015415,NM_024734	chr14,chr14	+,-	FLJ45244,CLMN	-160852,1163
chr20:49572259-49572985	chr20	+	49572483	49572838	True	NM_003859,NM_014484	chr20,chr20	-,+	DPM1,MOCS3	2277,2524
chr16:89286779-89287657	chr16	+	89287071	89287392	True	NR_037705,NM_001201407,NM_005187,NM_182531	chr16,chr16,chr16,chr16	+,+,-,+	ZNF778,ZNF778,CBFA2T3,ZNF778	-3011,-3011,-243567,-3011
chr5:130602906-130604049	chr5	+	130603165	130604099	True	NR_024610,NM_001038702,NM_020240	chr5,chr5,chr5	-,+,+	HINT1,CDC42SE2,CDC42SE2	-102131,-3522,-3522
chr11:65638439-65639400	chr11	+	65638485	65639218	True	NR_037718,NM_016938,NM_001335	chr11,chr11,chr11	-,-,+	EFEMP2,EFEMP2,CTSW	1237,1237,8065
chr2:33825132-33825507	chr2	+	33825133	33825405	True	NM_015475,NM_015376	chr2,chr2	-,+	FAM98A,RASGRP3	-771,-86242
chr5:140602773-140603268	chr5	+	140602830	140603292	True	NM_018934,NM_018933,NM_031947	chr5,chr5,chr5	+,+,-	PCDHB14,PCDHB13,SLC25A2	33,-9372,80370
chr6:149657211-149657639	chr6	+	149657224	149657643	True	NM_207360,NM_015093	chr6,chr6	-,+	ZC3H12D,TAB2	148568,-17842
chr17:46507189-46507552	chr17	+	46507272	46507582	True	NM_001075099,NR_033201,NM_003726	chr17,chr17,chr17	-,+,-	SKAP1,LOC404266,SKAP1	62,160240,62
chr17:38117317-38117960	chr17	+	38117585	38117926	True	NM_178171,NM_139280	chr17,chr17	+,-	GSDMA,ORMDL3	1299,-33701
chr6:167797071-167797659	chr6	+	167797180	167797676	True	NM_004610,NM_031949	chr6,chr6	-,+	TCP10,TTLL2	372,-58657
chr6:167797071-167797659	chr6	-	167584402	167584670	False	NM_005299,NM_001145121	chr6,chr6	-,+	GPR31,TCP10L2	-13083,-372
chr2:239009244-239009445	chr2	+	239009275	239009445	True	NM_194312,NM_030768	chr2,chr2	+,-	ESPNL,ILKAP	-375,102929
chr7:69063642-69063988	chr7	+	69063646	69063954	True	NM_001127231,NM_001127232,NM_015570,NR_037477	chr7,chr7,chr7,chr7	+,+,+,-	AUTS2,AUTS2,AUTS2,MIR3914-1	-38,-37,-37,1708852
chr19:10146854-10147501	chr19	+	10147066	10147472	True	NM_015719,NR_027300	chr19,chr19	-,+	COL5A3,C3P1	-25919,4559
chr11:117793040-117794793	chr11	+	117793341	117794782	True	NM_001558,NM_001077263	chr11,chr11	+,-	IL10RA,TMPRSS13	62323,5383
chrX:27998491-27998861	chrX	+	27998510	27998884	True	NM_182506,NM_001017930	chrX,chrX	+,-	MAGEB10,DCAF8L1	-172454,732
chr10:71930489-71930774	chr10	+	71930504	71930622	True	NM_001142648,NM_018649,NM_020150	chr10,chr10,chr10	-,+,-	SAR1A,H2AFY2,SAR1A	-219,-118198,-219
chr16:30675114-30675560	chr16	+	30675208	30675468	True	NM_138447,NM_001105079	chr16,chr16	-,+	ZNF689,FBRS	-53526,309
chr11:73718936-73719501	chr11	+	73719020	73719274	True	NM_022803,NM_003356,NM_153614	chr11,chr11,chr11	-,-,+	UCP3,UCP3,DNAJB13	1058,1058,-57708
chr1:26200533-26201460	chr1	+	26200846	26201480	True	NM_178422,NM_001099626	chr1,chr1	-,+	PAQR7,FAM54B	-3102,-53579
chr20:61904736-61904999	chr20	+	61904761	61905037	True	NM_018209,NM_152864,NM_175609	chr20,chr20,chr20	+,-,+	ARFGAP1,NKAIN4,ARFGAP1	-653,-18869,-653
chr14:74248359-74249948	chr14	+	74248847	74249925	True	NM_001146154,NM_001043318	chr14,chr14	+,-	PTGR2,C14orf43	68608,4021
chr10:31651014-31651243	chr10	+	31651095	31651227	True	NM_001174094,NR_024284	chr10,chr10	+,-	ZEB1,LOC220930	-41082,-43071
chr12:5309526-5310299	chr12	+	5309591	5310341	True	NM_006422,NM_002234	chr12,chr12	-,+	AKAP3,KCNA5	-555248,-156557
chr10:102000699-102001065	chr10	+	102000699	102000764	True	NM_005063,NR_002954	chr10,chr10	+,-	SCD,SNORA12	106007,-3640
chr18:77161805-77162010	chr18	+	77161806	77161978	True	NM_006162,NM_172388,NM_172389,NM_172387,NM_001146343,NM_172390	chr18,chr18,chr18,chr18,chr18,chr18	+,+,+,+,-,+	NFATC1,NFATC1,NFATC1,NFATC1,PQLC1,NFATC1	-6085,-6085,-1531,-1531,549725,-6085
chr16:70381026-70381684	chr16	+	70381101	70381429	True	NM_018332,NM_001605	chr16,chr16	+,-	DDX19A,AARS	-328,-57689
chrX:119003189-119003753	chrX	+	119003204	119003710	True	NM_006978,NM_004541	chrX,chrX	-,+	RNF113A,NDUFA1	2131,2023
chr7:49998699-49999735	chr7	+	49998699	49999577	True	NM_001159878,NM_001161834	chr7,chr7	-,+	ZPBP,C7orf72	133346,136104
chrX:64757525-64758910	chrX	+	64757525	64758746	True	NM_001170650,NM_031206,NM_001170649,NM_001010888	chrX,chrX,chrX,chrX	-,-,-,+	LAS1L,LAS1L,LAS1L,ZC3H12B	-2839,-2839,-2839,-48965
chr16:27439715-27441323	chr16	+	27439984	27440787	True	NR_037158,NM_021798	chr16,chr16	-,+	LOC283888,IL21R	23977,-1456
chr17:18548223-18548788	chr17	+	18548227	18548763	True	NM_001037330,NM_001039397	chr17,chr17	+,-	TRIM16L,TBC1D28	76638,-487
chr17:18548223-18548788	chr17	-	15634538	15635055	False	NM_006470,NM_178571	chr17,chr17	-,+	TRIM16,TBC1D26	-48345,535
chr15:43423885-43425138	chr15	+	43424206	43425147	True	NM_024956,NM_174916	chr15,chr15	+,-	TMEM62,UBR1	574,-25920
chr4:146403940-146404290	chr4	+	146403955	146404327	True	NM_001003688,NM_005900,NM_001102653	chr4,chr4,chr4	+,+,-	SMAD1,SMAD1,OTUD4	-49,-1055,-303123
chr14:33403693-33404030	chr14	+	33403847	33403917	True	NM_001164749,NM_001165893,NR_027263,NM_173159,NM_022123	chr14,chr14,chr14,chr14,chr14	+,+,-,+,+	NPAS3,NPAS3,C14orf128,NPAS3,NPAS3	4541,4541,-857942,4541,4541
chr1:27250052-27251665	chr1	+	27250314	27251713	True	NM_021969,NM_006600	chr1,chr1	-,+	NR0B2,NUDC	-9747,-2141
chr1:229771575-229772121	chr1	+	229771575	229772021	True	NM_014409,NM_001025247,NM_014777	chr1,chr1,chr1	-,-,+	TAF5L,TAF5L,URB2	-9781,-9781,-9645
chr1:41444710-41445014	chr1	+	41444721	41444905	True	NM_001905,NM_001168247	chr1,chr1	+,-	CTPS,SLFNL1	101,42542
chr15:45671244-45671905	chr15	+	45671276	45671904	True	NM_001482,NR_033252	chr15,chr15	-,+	GATM,LOC145663	-296,-429
chr17:36615048-36615412	chr17	+	36615101	36615439	True	NM_001004334,NM_001199417	chr17,chr17	-,+	GPR179,ARHGAP23	-115408,-30432
chr2:107105752-107106369	chr2	+	107105765	107106407	True	NM_001144013,NR_003506	chr2,chr2	-,+	RGPD3,PLGLA	-20964,-103047
chr2:107105752-107106369	chr2	-	87086657	87087103	False	NR_037931,NM_172101,NM_172102,NM_001178100,NM_172213,NM_004931	chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-	LOC100286979,CD8B,CD8B,CD8B,CD8B,CD8B	1844,1994,1994,1994,1994,1994
chr6:85474096-85474362	chr6	+	85474186	85474346	True	NM_001204813,NM_001080508	chr6,chr6	+,-	NT5E,TBX18	684955,-287
chr19:12842362-12842792	chr19	+	12842439	12842646	True	NM_004317,NM_001136195,NM_024038,NM_013433,NM_001136196	chr19,chr19,chr19,chr19,chr19	+,-,-,-,-	ASNA1,TNPO2,C19orf43,TNPO2,TNPO2	5659,-7629,2940,-9334,-8977
chr2:167913983-167914822	chr2	+	167913983	167914518	True	NM_002976,NM_001199144	chr2,chr2	-,+	SCN7A,XIRP2	-570505,129274
chr13:98829046-98829289	chr13	+	98829097	98829231	True	NM_178861,NR_036129	chr13,chr13	-,+	RNF113B,MIR3170	340,31546
chr5:81268346-81268630	chr5	+	81268380	81268681	True	NM_031482,NM_012446,NM_001131028	chr5,chr5,chr5	+,-,+	ATG10,SSBP2,ATG10	-587,-221308,-587
chr11:75920916-75921141	chr11	+	75920928	75921093	True	NM_004626,NM_020193	chr11,chr11	-,+	WNT11,C11orf30	-3354,234975
chr7:95116949-95117373	chr7	+	95116992	95117326	True	NM_145872,NM_016116,NM_001018161	chr7,chr7,chr7	+,+,-	ASB4,ASB4,PON2	-1839,-1839,-52608
chr1:162040083-162040357	chr1	+	162040190	162040394	True	NM_014697,NM_001164757,NM_015441	chr1,chr1,chr1	+,+,-	NOS1AP,NOS1AP,OLFML2B	-660,-660,-46546
chr19:41083032-41083263	chr19	+	41083076	41083210	True	NM_000713,NM_138392	chr19,chr19	-,+	BLVRB,SHKBP1	-111351,-370
chr5:178770129-178770466	chr5	+	178770219	178770369	True	NM_021599,NM_014244,NM_025158	chr5,chr5,chr5	-,-,+	ADAMTS2,ADAMTS2,RUFY1	2112,2112,207201
chr17:55122552-55122823	chr17	+	55122554	55122822	True	NM_004645,NR_002818	chr17,chr17	-,+	COIL,RNF126P1	-84143,16
chr16:67222488-67222759	chr16	+	67222487	67222747	True	NM_001950,NM_178516,NM_001040715	chr16,chr16,chr16	+,-,-	E2F4,EXOC3L1,KIAA0895L	3320,1410,-4604
chr19:16999415-16999695	chr19	+	16999494	16999678	True	NM_003950,NM_015692	chr19,chr19	+,-	F2RL3,CPAMD8	147,137997
chr15:55489251-55489705	chr15	+	55489334	55489742	True	NM_004855,NM_016304	chr15,chr15	+,-	PIGB,RSL24D1	121390,-103
chr10:99618530-99619234	chr10	+	99618617	99619270	True	NM_003015,NM_001010917	chr10,chr10	-,+	SFRP5,GOLGA7B	-86861,-8672
chr1:100597250-100598085	chr1	+	100597352	100598106	True	NM_019083,NM_194292	chr1,chr1	+,-	CCDC76,SASS6	599,455
chr4:89696740-89697932	chr4	+	89696924	89697539	True	NM_001015045,NR_002806	chr4,chr4	-,+	FAM13A,FAM13AOS	46914,-66035
chr7:152446263-152446489	chr7	+	152446266	152446532	True	NM_005431,NM_001040135	chr7,chr7	-,+	XRCC2,ACTR3B	-73016,10318
chr6:3156888-3157503	chr6	+	3157144	3157258	True	NM_001069,NR_026650	chr6,chr6	-,+	TUBB2A,BPHL	575,-38269
chr10:47132671-47134297	chr10	+	47132757	47134337	True	NR_003277,NM_005972	chr10,chr10	-,+	LOC728643,PPYR1	-21,-49275
chr7:90424286-90424682	chr7	+	90424355	90424697	True	NM_006980,NM_012395	chr7,chr7	-,+	MTERF,CDK14	1085369,-85705
chr11:60693730-60694615	chr11	+	60693794	60694474	True	NM_014502,NM_017870,NM_178031	chr11,chr11,chr11	-,+,+	PRPF19,TMEM132A,TMEM132A	-19733,-1933,-1933
chr8:29209895-29210131	chr8	+	29209894	29210086	True	NM_057158,NM_001394,NM_024567	chr8,chr8,chr8	-,-,+	DUSP4,DUSP4,HMBOX1	-3572,-1627,-461720
chr6:73962189-73962998	chr6	+	73962198	73963010	True	NM_001017361,NM_030568	chr6,chr6	+,-	C6orf221,KHDC1	109389,9949
chr12:109906616-109908310	chr12	+	109906934	109908310	True	NM_183415,NM_031954,NM_130466	chr12,chr12,chr12	+,-,+	UBE3B,KCTD10,UBE3B	7128,6895,7128
chr15:65358993-65359898	chr15	+	65359040	65359628	True	NM_016563,NM_001101362	chr15,chr15	-,+	RASL12,KBTBD13	810,9525
chr6:111433274-111435082	chr6	+	111433569	111435082	True	NM_018593,NR_002932	chr6,chr6	+,-	SLC16A10,GSTM2P1	-24849,-64812
chr15:59728249-59729368	chr15	+	59728335	59729277	True	NM_152450,NM_004998	chr15,chr15	+,-	FAM81A,MYO1E	1094,-63264
chr19:47105421-47105818	chr19	+	47105518	47105648	True	NM_001205281,NM_005184	chr19,chr19	-,+	LOC100506012,CALM3	-1061,-1058
chr17:77020132-77020361	chr17	+	77020174	77020360	True	NM_198594,NM_030968,NM_138793	chr17,chr17,chr17	+,+,-	C1QTNF1,C1QTNF1,CANT1	26,26,-14275
chr7:26240349-26240724	chr7	+	26240408	26240614	True	NM_002137,NM_007276,NM_031243,NM_016587	chr7,chr7,chr7,chr7	-,+,-,+	HNRNPA2B1,CBX3,HNRNPA2B1,CBX3	5,216,5,709
chrX:65717621-65718285	chrX	+	65717650	65718198	True	NM_001199689,NM_014799	chrX,chrX	-,+	EDA2R,HEPH	140744,-333592
chr12:7861470-7862132	chr12	+	7861891	7861962	True	NM_199286,NM_020634	chr12,chr12	+,-	DPPA3,GDF3	2126,-13531
chr22:46371639-46371873	chr22	+	46371742	46371868	True	NM_058238,NR_027240	chr22,chr22	-,+	WNT7B,LOC730668	1190,30627
chr5:10626224-10627603	chr5	+	10626429	10627521	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-62046,133916
chr2:27544203-27545833	chr2	+	27544543	27545851	True	NM_187841,NM_002437	chr2,chr2	+,-	TRIM54,MPV17	-39298,168
chr19:1284663-1285185	chr19	+	1284822	1285180	True	NR_027271,NM_001405,NM_017914	chr19,chr19,chr19	-,+,+	C19orf23,EFNA2,C19orf24	-14563,987,-9353
chr1:180604064-180604443	chr1	+	180604067	180604422	True	NM_001135669,NM_032360,NM_004736	chr1,chr1,chr1	+,-,+	XPR1,ACBD6,XPR1	-2972,-132045,-2972
chr22:38202119-38202624	chr22	+	38202123	38202590	True	NM_138797,NM_014291,NM_005318,NM_001171690	chr22,chr22,chr22,chr22	-,+,+,+	ANKRD54,GCAT,H1F0,GCAT	37813,1321,-1060,1321
chr3:9920403-9921576	chr3	+	9920493	9921604	True	NM_032492,NM_022094,NM_001199623,NM_001199552,NM_001199551	chr3,chr3,chr3,chr3,chr3	+,-,-,-,-	JAGN1,CIDEC,CIDEC,CIDEC,CIDEC	10666,-3,3,384,384
chr4:164269999-164271080	chr4	+	164270142	164270987	True	NM_006174,NM_000909	chr4,chr4	+,-	NPY5R,NPY1R	-5109,-16195
chr21:32190263-32191771	chr21	+	32190379	32191811	True	NM_001128077,NM_175857	chr21,chr21	+,-	KRTAP20-3,KRTAP8-1	-175254,-4809
chr3:111577966-111578293	chr3	+	111577994	111578279	True	NM_024508,NM_145753,NM_001134438,NM_001134439	chr3,chr3,chr3,chr3	-,+,+,+	ZBED2,PHLDB2,PHLDB2,PHLDB2	-263828,-18,-18,288
chr1:44459241-44460203	chr1	+	44459400	44459830	True	NM_152499,NM_006934	chr1,chr1	+,-	CCDC24,SLC6A9	-2180,23217
chr2:6121907-6122802	chr2	+	6121920	6122730	True	NM_207315,NR_026833	chr2,chr2	-,+	CMPK2,LOC400940	883256,-123
chr17:17480459-17480860	chr17	+	17480472	17480882	True	NM_007169,NM_018019,NM_148173	chr17,chr17,chr17	-,+,-	PEMT,MED9,PEMT	4913,-100233,-53
chr14:77849245-77851245	chr14	+	77849370	77851114	True	NM_001010860,NM_213601	chr14,chr14	+,-	SAMD15,TMED8	-5667,-5974
chr7:93552669-93554398	chr7	+	93552767	93554195	True	NM_004126,NM_006528	chr7,chr7	+,-	GNG11,TFPI2	-1805,-32702
chr11:8832246-8832724	chr11	+	8832288	8832722	True	NM_139157,NM_213618,NM_020642	chr11,chr11,chr11	-,-,+	ST5,ST5,C11orf17	210,-64,99978
chr5:42754132-42754415	chr5	+	42754154	42754329	True	NM_001134848,NM_001085486	chr5,chr5	+,-	CCDC152,SEPP1	2590,57756
chr19:55455033-55455900	chr19	+	55455038	55455936	True	NM_206828,NM_139176,NM_001174081,NM_001127255	chr19,chr19,chr19,chr19	-,-,+,-	NLRP7,NLRP7,NLRP2,NLRP7	2987,2987,20715,2987
chr5:169780007-169780215	chr5	+	169780106	169780264	True	NM_004137,NM_001034838	chr5,chr5	-,+	KCNMB1,KCNIP1	36424,616
chrX:69509179-69509765	chrX	+	69509203	69509797	True	NM_012310,NM_016484,NM_001032726	chrX,chrX,chrX	+,-,+	KIF4A,PDZD11,RAB41	81,51,-7232
chr13:53063298-53063773	chr13	+	53063455	53063671	True	NM_016075,NR_002793	chr13,chr13	-,+	VPS36,TPTE2P3	-38692,-378
chr13:53063298-53063773	chr13	-	52907868	52908084	False	NM_001098525,NR_033775	chr13,chr13	+,-	CKAP2,TPTE2P2	121410,-43749
chr8:22020103-22020616	chr8	+	22020113	22020527	True	NM_139278,NM_001199,NM_001172357,NR_033403,NR_033404,NM_001172410,NM_006129,NM_003018	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,+,+,+,+,+,+,+	LGI3,BMP1,SFTPC,BMP1,BMP1,SFTPC,BMP1,SFTPC	-5769,2125,-980,2125,2125,-980,2125,-980
chr2:32583029-32584862	chr2	+	32583166	32584552	True	NM_021209,NM_016252	chr2,chr2	-,+	NLRC4,BIRC6	-92354,-1121
chr14:100705279-100705505	chr14	+	100705284	100705551	True	NM_003403,NM_001039355	chr14,chr14	+,-	YY1,SLC25A29	-233,67359
chr9:128508499-128508718	chr9	+	128508532	128508654	True	NM_001006618,NM_006195,NR_024123,NR_024122,NM_001134778	chr9,chr9,chr9,chr9,chr9	-,+,+,+,+	MAPKAP1,PBX3,PBX3,PBX3,PBX3	-39019,962,962,962,1823
chr14:24685229-24686789	chr14	+	24685516	24686336	True	NM_014169,NM_001199821,NM_001199822,NM_138476,NM_174944	chr14,chr14,chr14,chr14,chr14	-,-,-,-,+	CHMP4A,MDP1,MDP1,MDP1,TSSK4	-2480,-240,-240,-240,-10641
chr1:78148299-78148828	chr1	+	78148334	78148688	True	NM_015534,NM_198549	chr1,chr1	-,+	ZZZ3,FAM73A	-1,96620
chr3:148803198-148803508	chr3	+	148803393	148803479	True	NM_032383,NM_139048,NM_003071	chr3,chr3,chr3	+,-,-	HPS3,HLTF,HLTF	43891,912,912
chr11:448313-448956	chr11	+	448339	448851	True	NM_030783,NM_001012302	chr11,chr11	+,-	PTDSS2,ANO9	1428,-6328
chr16:31469462-31469751	chr16	+	31469481	31469787	True	NM_001136509,NM_024742,NM_001105247	chr16,chr16,chr16	-,+,+	ZNF843,ARMC5,ARMC5	-15133,529,529
chr4:70915330-70915967	chr4	+	70915330	70916007	True	NM_001891,NM_002159	chr4,chr4	-,+	CSN2,HTN1	-88604,151
chr4:70915330-70915967	chr4	+	70893882	70894034	False	NM_000200,NM_001891	chr4,chr4	+,-	HTN3,CSN2	95,-67156
chr3:63806009-63807457	chr3	+	63806092	63807469	True	NR_026866,NM_025075	chr3,chr3	+,-	C3orf49,THOC7	-1110,42185
chr5:34837163-34837382	chr5	+	34837174	34837260	True	NM_144725,NR_026591	chr5,chr5	+,-	TTC23L,RAD1	2008,78529
chr1:236850524-236851555	chr1	+	236850570	236851459	True	NM_018072,NM_001103	chr1,chr1	-,+	HEATR1,ACTN2	-82729,-859
chr5:70680466-70680744	chr5	+	70680465	70680714	True	NR_003922,NR_033968	chr5,chr5	+,-	PMCHL2,LOC100049076	-8911,-125343
chr11:2183822-2184038	chr11	+	2183956	2184084	True	NR_028044,NM_000207,NR_003512,NM_199293,NM_199292,NM_001185098,NM_001042376,NM_001185097,NM_000360	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,-,-,-,-,-,-,-,-	IGF2AS,INS,INS-IGF2,TH,TH,INS,INS-IGF2,INS,TH	-22249,-1517,-1517,9001,9001,-1517,-1517,-1517,9001
chr4:6275006-6275341	chr4	+	6275006	6275360	True	NM_006005,NM_144720,NM_001145853	chr4,chr4,chr4	+,-,+	WFS1,JAKMIP1,WFS1	-3480,-72688,-3480
chr5:138731237-138732191	chr5	+	138731276	138732222	True	NM_001033112,NM_016459,NM_194296,NM_001161546	chr5,chr5,chr5,chr5	+,-,-,-	PAIP2,MZB1,SPATA24,LOC389333	-53193,-5671,7604,-391
chr21:46359494-46359697	chr21	+	46359610	46359746	True	NM_058190,NR_027128,NR_027129	chr21,chr21,chr21	+,-,-	C21orf70,C21orf67,C21orf67	208,132,132
chrX:134662060-134662376	chrX	+	134662069	134662245	True	NM_007131,NM_182540	chrX,chrX	-,+	ZNF75D,DDX26B	-232104,-7566
chr20:10201835-10202762	chr20	+	10201835	10202776	True	NM_130811,NM_018848,NM_003081	chr20,chr20,chr20	+,-,+	SNAP25,MKKS,SNAP25	-2411,209851,-2411
chr9:124031046-124031697	chr9	+	124031065	124031673	True	NM_198252,NM_001127663,NM_001127662,NM_016322,NM_001127667,NM_001127666,NM_001127665,NM_001127664	chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9	+,+,+,-,+,+,+,+	GSN,GSN,GSN,RAB14,GSN,GSN,GSN,GSN	-736,-736,-736,-66700,-736,-736,-736,-736
chr22:26872471-26874258	chr22	+	26872796	26874194	True	NM_152841,NM_001013694,NM_022081	chr22,chr22,chr22	-,+,-	HPS4,SRRD,HPS4	1414,5655,5683
chr1:193027954-193028187	chr1	+	193028077	193028161	True	NM_001173525,NM_001173524,NM_001199262,NM_001199263,NM_001199261,NM_015984,NR_033393,NM_004600,NM_001042369,NM_001042370	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,-,-,-,+,+,+,+	TROVE2,TROVE2,UCHL5,UCHL5,UCHL5,UCHL5,TROVE2,TROVE2,TROVE2,TROVE2	842,390,412,412,412,412,390,842,842,842
chr15:34334117-34334760	chr15	+	34334213	34334529	True	NM_020371,NM_152595	chr15,chr15	-,+	AVEN,PGBD4	-2910,59744
chr19:14202616-14202878	chr19	+	14202736	14202800	True	NR_024282,NM_138352	chr19,chr19	+,-	LOC113230,SAMD1	-18966,-1504
chr1:50567813-50569518	chr1	+	50568282	50569374	True	NM_001144776,NM_032785,NM_001144774,NM_001144775,NM_021952	chr1,chr1,chr1,chr1,chr1	+,-,+,+,+	ELAVL4,AGBL4,ELAVL4,ELAVL4,ELAVL4	207,-78656,5219,2589,5219
chr17:75130519-75132045	chr17	+	75131008	75131447	True	NR_036200,NM_001039573,NM_003003,NM_001143999,NM_001143998	chr17,chr17,chr17,chr17,chr17	-,+,+,+,+	MIR4316,SEC14L1,SEC14L1,SEC14L1,SEC14L1	261740,5557,5557,5557,5557
chr15:45929916-45930843	chr15	+	45929943	45930412	True	NM_021199,NM_013309	chr15,chr15	+,-	SQRDL,SLC30A4	-2738,-114941
chr5:71805001-71806163	chr5	+	71805189	71806193	True	NM_024754,NM_152625	chr5,chr5	+,-	PTCD2,ZNF366	-189041,-1940
chr16:3770233-3770446	chr16	+	3770335	3770427	True	NM_005223,NM_016292	chr16,chr16	+,-	DNASE1,TRAP1	-67448,-2737
chr2:229348608-229349270	chr2	+	229348655	229349069	True	NM_178821,NM_030623	chr2,chr2	+,-	WDR69,SPHKAP	-612385,-302294
chr1:21044768-21045003	chr1	+	21044811	21044989	True	NM_020816,NM_001122819,NM_032409	chr1,chr1,chr1	-,-,+	KIF17,KIF17,PINK1	-494,-494,-84914
chr11:123986874-123988250	chr11	+	123987053	123988299	True	NM_198315,NM_014622,NM_001130142,NM_001004463	chr11,chr11,chr11,chr11	+,+,+,-	VWA5A,VWA5A,VWA5A,OR10G7	-993,-993,-993,-77345
chr3:48632248-48632477	chr3	+	48632282	48632362	True	NM_000094,NM_033629	chr3,chr3	-,+	COL7A1,TREX1	281,-125104
chr10:101492988-101493677	chr10	+	101493261	101493598	True	NM_015960,NM_078470,NM_004376	chr10,chr10,chr10	+,-,-	CUTC,COX15,COX15	-1354,-838,-838
chr17:44895441-44895814	chr17_ctg5_hap1	+	1662783	1662935	False	NR_033799,NM_016632	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	NSFP1,ARL17A	-137921,-148899
chr17:44895441-44895814	chr17	+	44895586	44895738	True	NM_003396,NM_030753	chr17,chr17	+,-	WNT9B,WNT3	33229,394
chr1:101001895-101003201	chr1	+	101001927	101003020	True	NM_022049,NM_001918	chr1,chr1	+,-	GPR88,DBT	707,-286518
chr10:97558771-97559931	chr10	+	97558771	97559050	True	NM_001143973,NM_001776	chr10,chr10	-,+	TCTN3,ENTPD1	-104871,-43158
chr6:74073558-74074029	chr6	+	74073567	74073877	True	NM_001080507,NM_001025290,NM_001017361	chr6,chr6,chr6	-,-,+	OOEP,DPPA5,C6orf221	5692,-9568,-1218
chr12:120426644-120426864	chr12	+	120426756	120426912	True	NM_207311,NM_007174	chr12,chr12	+,-	CCDC64,CIT	735,-111664
chr22:36916458-36917779	chr22	+	36916551	36917584	True	NM_003753,NM_145343	chr22,chr22	-,+	EIF3D,APOL1	7744,-267485
chr19:11268922-11269385	chr19	+	11269197	11269300	True	NM_001195803,NM_182513	chr19,chr19	+,-	LDLR,SPC24	-69224,-2713
chr19:58629976-58631370	chr19	+	58630208	58631150	True	NM_001145542,NM_007134,NR_027135	chr19,chr19,chr19	-,+,-	ZSCAN18,ZNF135,ZSCAN18	-415,-59652,-415
chr17:73509380-73509780	chr17	+	73509499	73509827	True	NM_207346,NM_020753,NM_001142643	chr17,chr17,chr17	+,-,-	TSEN54,CASKIN2,CASKIN2	2781,1850,-3541
chr10:38381664-38382518	chr10	+	38381849	38382015	True	NM_003421,NM_001007094,NM_145011,NM_001178101	chr10,chr10,chr10,chr10	+,+,-,+	ZNF37A,ZNF37A,ZNF25,ZNF37A	1248,1248,-116396,1248
chr10:38381664-38382518	chr10	-	43049865	43049915	False	NR_026827,NR_026777	chr10,chr10	+,-	LOC84856,ZNF37BP	-78977,-1585
chr12:27680334-27680922	chr12	+	27680493	27680873	True	NM_003622,NM_001146221,NM_001198916,NM_001198915,NM_177444	chr12,chr12,chr12,chr12,chr12	+,-,+,+,+	PPFIBP1,LOC100287284,PPFIBP1,PPFIBP1,PPFIBP1	-3505,243388,-3505,-3505,-3505
chr11:43379024-43380240	chr11	+	43379178	43380278	True	NM_018259,NR_033868	chr11,chr11	+,-	TTC17,LOC399881	156,-88259
chr5:147256763-147257223	chr5	+	147256807	147257205	True	NM_054023,NM_206966	chr5,chr5	+,-	SCGB3A2,C5orf46	1068,28946
chr3:51705938-51706157	chr3	+	51706001	51706197	True	NM_015926,NM_001129884,NR_024012,NM_001143833	chr3,chr3,chr3,chr3	+,+,+,-	TEX264,TEX264,TEX264,IQCF6	-830,-830,-830,107056
chr1:159171694-159172110	chr1	+	159171755	159172159	True	NM_002036,NR_037870,NM_001122951	chr1,chr1,chr1	+,-,+	DARC,LOC100131825,DARC	1643,103,2889
chr14:103754153-103754631	chr14	+	103754223	103754371	True	NR_033938,NM_001969	chr14,chr14	-,+	LOC100131366,EIF5	-98858,46121
chr7:64360662-64360894	chr7	+	64360789	64360921	True	NR_002789,NR_003099,NM_021148	chr7,chr7,chr7	-,+,+	LOC168474,ZNF273,ZNF273	-46611,2698,2698
chr16:85343830-85344434	chr16	+	85343921	85344379	True	NR_033984,NM_198491	chr16,chr16	+,-	LOC400548,FAM92B	-173216,-197807
chr7:90445229-90447198	chr7	+	90445427	90447233	True	NM_006980,NM_012395	chr7,chr7	-,+	MTERF,CDK14	1062833,-106766
chr15:101834730-101834985	chr15	+	101834887	101835001	True	NM_024652,NM_003090	chr15,chr15	+,-	LRRK1,SNRPA1	-375485,509
chr10:95041162-95041861	chr10	+	95041224	95041910	True	NM_013451,NM_000783	chr10,chr10	-,+	MYOF,CYP26A1	200214,-207628
chr9:131446868-131448023	chr9	+	131447102	131447850	True	NM_052844,NM_001122821,NM_003011	chr9,chr9,chr9	-,+,+	WDR34,SET,SET	-27973,-1219,3658
chr19:5912706-5913861	chr19	+	5912913	5913284	True	NR_034166,NM_001193375,NM_001017921,NM_175614,NM_004058,NM_080590	chr19,chr19,chr19,chr19,chr19,chr19	-,-,+,-,+,+	NDUFA11,NDUFA11,VMAC,NDUFA11,CAPS,CAPS	-8889,-8889,-8112,-8889,908,908
chr8:12054665-12055795	chr8	+	12054848	12055205	True	NM_001083537,NR_003494,NR_027425	chr8,chr8,chr8	-,-,+	FAM86B1,FAM86B1,FAM66D	-3224,-3224,-81608
chr21:37692778-37693001	chr21	+	37692777	37693023	True	NM_012130,NM_015358	chr21,chr21	-,+	CLDN14,MORC3	145752,-341
chr19:49261379-49261645	chr19	+	49261463	49261633	True	NM_019113,NM_000148	chr19,chr19	+,-	FGF21,FUT1	-2170,-2816
chr8:136244164-136244954	chr8	+	136244185	136244997	True	NR_026706,NR_029599	chr8,chr8	+,-	LOC286094,MIR30D	1376,-426997
chr20:30003345-30004868	chr20	+	30003345	30004847	True	NM_001011878,NR_002577,NM_001171832	chr20,chr20,chr20	-,+,-	DEFB121,DEFB122,DEFB121	-9276,4394,-2704
chr14:23623807-23624429	chr14	+	23623851	23624397	True	NM_017924,NM_182728	chr14,chr14	+,-	C14orf119,SLC7A8	-59114,-241
chr9:4698708-4700441	chr9	+	4698799	4700164	True	NM_017913,NM_001199856	chr9,chr9	+,-	CDC37L1,AK3	-19298,26123
chr6:159277810-159278647	chr6	+	159278070	159278669	True	NR_028496,NM_001195032	chr6,chr6	-,+	OSTCL,C6orf99	45,30949
chr16:84683201-84683717	chr16	+	84683215	84683693	True	NM_021149,NM_024731	chr16,chr16	-,+	COTL1,KLHL36	-31546,-1135
chr22:39900384-39900920	chr22	+	39900439	39900855	True	NM_019008,NM_194326	chr22,chr22	+,-	SMCR7L,RPS19BP1	-2206,28055
chr1:2003885-2004534	chr1	+	2004081	2004449	True	NM_001080484,NM_001033581	chr1,chr1	-,+	KIAA1751,PRKCZ	-68805,636
chr13:76111686-76111964	chr13	+	76111793	76111981	True	NM_203497,NM_203495,NM_006002	chr13,chr13,chr13	-,-,+	COMMD6,COMMD6,UCHL3	60,60,11945
chr12:122687584-122687828	chr12	+	122687633	122687827	True	NM_030765,NM_019887	chr12,chr12	+,-	B3GNT4,DIABLO	400,24291
chr2:233320603-233320861	chr2	+	233320620	233320706	True	NM_001631,NM_004826	chr2,chr2	+,-	ALPI,ECEL1	126,31876
chr7:7606109-7606371	chr7	+	7606113	7606371	True	NM_001037763,NM_019005	chr7,chr7	-,+	COL28A1,MIOS	-30653,244
chr8:95570047-95570430	chr8	+	95570058	95570452	True	NM_183009,NM_015496,NM_001034915	chr8,chr8,chr8	-,-,+	KIAA1429,KIAA1429,ESRP1	-4312,-4312,82911
chrY:21239482-21239695	chrY	+	21239561	21239627	True	NR_002159,NR_001543	chrY,chrY	+,-	TTTY9B,TTTY14	-347844,-259
chr15:90777894-90778958	chr15	+	90777900	90778508	True	NM_001013657,NM_006384	chr15,chr15	+,-	C15orf58,CIB1	-464,-621
chr12:58241409-58242006	chr12	+	58241545	58242033	True	NM_005730,NM_001172697	chr12,chr12	-,+	CTDSP2,TSFM	-798,-65068
chr5:43604322-43605338	chr5	+	43604334	43605258	True	NM_182977,NM_012343,NM_183323	chr5,chr5,chr5	+,+,-	NNT,NNT,PAIP1	-1156,-1594,-46813
chr10:125425209-125425606	chr10	+	125425290	125425542	True	NM_198148,NM_153442	chr10,chr10	-,+	CPXM2,GPR26	226008,328
chr15:90197692-90198015	chr15	+	90197784	90198062	True	NM_020212,NM_198525	chr15,chr15	+,-	WDR93,KIF7	35965,670
chr17:29716905-29717141	chr17	+	29716910	29717134	True	NM_014210,NM_032932	chr17,chr17	-,+	EVI2A,RAB11FIP4	-68143,1507
chr16:66913089-66913637	chr16	+	66913516	66913580	True	NM_020786,NM_001204744	chr16,chr16	+,-	PDP2,CDH16	802,39357
chr19:17831748-17832205	chr19	+	17831749	17832165	True	NM_001080421,NM_018174	chr19,chr19	-,+	UNC13A,MAP1S	-32741,-1497
chr2:95538704-95539150	chr2	+	95538775	95539173	True	NR_003366,NM_144705	chr2,chr2	-,+	ANKRD20A8P,TEKT4	-15955,-1594
chr5:753498-753799	chr5	+	753522	753708	True	NM_001166260,NM_007030	chr5,chr5	+,-	TRIP13,TPPP	139260,-60012
chr5:753498-753799	chr5	+	846083	846147	False	NM_001166260,NM_024786	chr5,chr5	+,-	TRIP13,ZDHHC11	46821,5004
chr6:117741359-117741886	chr6	+	117741423	117741913	True	NM_173674,NM_002944	chr6,chr6	+,-	DCBLD1,ROS1	61906,5161
chrX:129040257-129040642	chrX	+	129040321	129040621	True	NM_001166221,NM_006649,NM_016032	chrX,chrX,chrX	+,+,-	UTP14A,UTP14A,ZDHHC9	-275,-275,-62411
chr6:27778754-27780650	chr6	+	27778927	27780655	True	NM_003536,NM_003509,NM_003521,NM_003519,NM_021066	chr6,chr6,chr6,chr6,chr6	+,+,+,-,-	HIST1H3H,HIST1H2AI,HIST1H2BM,HIST1H2BL,HIST1H2AJ	-1143,-3008,2166,-3218,1913
chr17:7259472-7260168	chr17	+	7259645	7260114	True	NM_032442,NM_198154,NM_001002914	chr17,chr17,chr17	-,+,+	NEURL4,TMEM95,KCTD11	-27007,-1199,-4488
chr12:69346986-69348876	chr12	+	69347139	69348501	True	NM_001874,NM_002392	chr12,chr12	-,+	CPM,MDM2	8583,-145220
chr15:89183066-89184052	chr15	+	89183303	89183888	True	NR_026645,NM_002201	chr15,chr15	-,+	DET1,ISG20	-93391,-1315
chr7:144057029-144058243	chr7	+	144057067	144057875	True	NM_005435,NM_001080413	chr7,chr7	+,-	ARHGEF5,NOBOX	-4631,42973
chr7:144057029-144058243	chr7	-	143887361	143888154	False	NM_001003702,NM_198495	chr7,chr7	-,+	ARHGEF35,CTAGE4	4689,-6876
chr7:144057029-144058243	chr7	-	143985946	143986739	False	NR_002158,NR_033942,NR_002157	chr7,chr7,chr7	+,-,+	OR2A20P,LOC728377,OR2A9P	9726,-2850,9874
chr9:130500243-130500803	chr9	+	130500304	130500850	True	NM_130459,NM_144965,NM_001085347,NM_001134430,NM_001134431	chr9,chr9,chr9,chr9,chr9	-,+,-,-,-	TOR2A,TTC16,TOR2A,TOR2A,TOR2A	-2700,-21997,-2700,-2700,-2700
chr6:139137458-139137711	chr6	+	139137540	139137621	True	NM_001195037,NM_001128617	chr6,chr6	+,-	ECT2L,REPS1	-20359,171842
chr1:32802368-32802685	chr1	+	32802400	32802662	True	NM_023009,NM_052841	chr1,chr1	-,+	MARCKSL1,TSSK3	-566,25199
chr20:5584686-5586278	chr20	+	5584685	5585964	True	NM_019593,NR_029405	chr20,chr20	-,+	GPCPD1,LOC643406	5759,-132894
chr1:101388731-101389239	chr1	+	101388859	101389087	True	NM_001439,NM_133496	chr1,chr1	-,+	EXTL2,SLC30A7	-28441,-27289
chr19:49370159-49371202	chr19	+	49370187	49370678	True	NM_014330,NM_020904,NM_001161354	chr19,chr19,chr19	+,-,-	PPP1R15A,PLEKHA4,PLEKHA4	4970,1256,1256
chr4:3445384-3445786	chr4	+	3445444	3445726	True	NM_002337,NM_001528	chr4,chr4	-,+	LRPAP1,HGFAC	88548,-1769
chr20:62285945-62286572	chr20	+	62285977	62286424	True	NM_015894,NM_016434,NR_037882,NM_032957	chr20,chr20,chr20,chr20	-,+,+,+	STMN3,RTEL1,RTEL1-TNFRSF6B,RTEL1	-1197,2738,2738,2738
chr12:25075659-25076637	chr12	+	25075842	25076691	True	NM_001204126,NM_001178093	chr12,chr12	+,-	LRMP,BCAT1	128489,-19833
chr2:61765421-61765850	chr2	+	61765438	61765796	True	NM_152392,NM_003400	chr2,chr2	+,-	AHSA2,XPO1	-360934,-20
chr6:112375637-112377086	chr6	+	112375696	112377127	True	NM_016262,NM_198239,NM_003880	chr6,chr6,chr6	-,+,+	TUBE1,WISP3,WISP3	31675,-376,-469
chr16:4473644-4474052	chr16	+	4473649	4473949	True	NM_005147,NM_001135110,NM_024535,NM_001201473,NM_001201472,NM_001201479	chr16,chr16,chr16,chr16,chr16,chr16	+,+,-,-,-,-	DNAJA3,DNAJA3,CORO7,CORO7,CORO7,CORO7-PAM16	1908,1908,-6687,-6687,-6687,-6687
chr19:34173905-34174617	chr19	+	34174150	34174610	True	NM_001166057,NM_022467	chr19,chr19	-,+	PEPD,CHST8	-161351,823
chr20:2781384-2781683	chr20	+	2781605	2781722	True	NM_080739,NM_001184699,NM_019609	chr20,chr20,chr20	+,-,-	C20orf141,CPXM1,CPXM1	13934,-313,-313
chr7:134575809-134576314	chr7	+	134575809	134576266	True	NM_033139,NM_033140,NM_024033	chr7,chr7,chr7	+,+,-	CALD1,CALD1,C7orf49	52,52,279316
chr19:58838833-58839307	chr19	+	58838925	58839234	True	NM_181846,NM_130786	chr19,chr19	+,-	ZSCAN22,A1BG	-591,25688
chr7:63021764-63023175	chr7	+	63021897	63023177	True	NR_028349,NR_036246	chr7,chr7	-,+	LOC100287834,MIR4283-1	-162478,58290
chr7:63021764-63023175	chr7	-	57081780	57083016	False	NR_036270,NR_036102	chr7,chr7	-,+	MIR4283-2,MIR3147	-58209,389714
chr6:167537571-167537797	chr6	+	167537571	167537704	True	NM_005299,NM_031409	chr6,chr6	-,+	GPR31,CCR6	33672,-1381
chr9:38622518-38623169	chr9	+	38622536	38623190	True	NR_027294,NM_147195	chr9,chr9	+,-	FAM201A,ANKRD18A	-1502,-2176
chr1:205718987-205720975	chr1	+	205719087	205720708	True	NM_022731,NM_181644	chr1,chr1	-,+	NUCKS1,MFSD4	67,-181026
chr4:176925778-176926257	chr4	+	176926090	176926305	True	NM_170710,NM_005277,NM_201592	chr4,chr4,chr4	+,-,-	WDR17,GPM6A,GPM6A	60679,-2442,-2442
chr10:51568832-51570038	chr10	+	51568832	51570058	True	NM_005437,NM_006327,NM_001145263,NM_001145262,NM_001145261,NM_001145260	chr10,chr10,chr10,chr10,chr10,chr10	+,-,+,+,+,+	NCOA4,TIMM23,NCOA4,NCOA4,NCOA4,NCOA4	2305,53328,-3777,6226,-3777,-3777
chr7:92911370-92912706	chr7	+	92911580	92912526	True	NM_017667,NM_001039372	chr7,chr7	+,-	CCDC132,HEPACAM2	-49986,-55798
chr14:35590835-35591069	chr14	+	35590838	35591004	True	NM_017917,NM_014672	chr14,chr14	-,+	PPP2R3C,KIAA0391	565,771
chr2:74404403-74405552	chr2	+	74404622	74405470	True	NM_018221,NM_006636	chr2,chr2	-,+	MOBKL1B,MTHFD2	575,20219
chr1:235490079-235490439	chr1	+	235490148	235490274	True	NM_031371,NM_001037277,NM_016374,NR_036605,NM_004837	chr1,chr1,chr1,chr1,chr1	-,+,-,+,+	ARID4B,GGPS1,ARID4B,GGPS1,GGPS1	1308,1478,1308,1594,1594
chr17:36503171-36504456	chr17	+	36503469	36504277	True	NM_001004334,NM_014598	chr17,chr17	-,+	GPR179,SOCS7	-3776,3729
chr5:172085177-172087041	chr5	+	172085285	172086576	True	NM_001142651,NM_004417	chr5,chr5	+,-	NEURL1B,DUSP1	-17060,111677
chr8:91016405-91018126	chr8	+	91016672	91017905	True	NM_002485,NM_001359	chr8,chr8	-,+	NBN,DECR1	-19773,-3149
chr4:96461478-96463392	chr4	+	96461500	96463167	True	NM_005390,NM_003728	chr4,chr4	+,-	PDHA2,UNC5C	298071,7258
chr1:236848746-236849485	chr1	+	236848749	236849414	True	NM_018072,NM_001103	chr1,chr1	-,+	HEATR1,ACTN2	-80908,355
chr7:23509644-23510232	chr7	+	23509691	23510281	True	NR_026676,NM_006547	chr7,chr7	+,-	RPS2P32,IGF2BP3	19725,24
chr2:27601853-27603081	chr2	+	27602094	27602986	True	NM_001201459,NM_001034116,NM_014748,NM_015636,NM_144631,NM_172195	chr2,chr2,chr2,chr2,chr2,chr2	-,-,+,-,-,-	ZNF513,EIF2B4,SNX17,EIF2B4,ZNF513,EIF2B4	375,-8770,-8768,-8770,675,-9175
chr10:76587765-76588416	chr10	+	76587777	76588181	True	NM_001003892,NM_012330	chr10,chr10	-,+	DUPD1,MYST4	230149,-1449
chr15:49755670-49757626	chr15	+	49755760	49757004	True	NM_152647,NM_002009	chr15,chr15	-,+	C15orf33,FGF7	156164,-40445
chr17:1390157-1390485	chr17	+	1390337	1390531	True	NM_001080779,NM_001080950,NR_028514,NM_033375	chr17,chr17,chr17,chr17	-,-,+,-	MYO1C,MYO1C,LOC100306951,MYO1C	5520,-1286,29681,4491
chr13:111363854-111364189	chr13	+	111363854	111364232	True	NM_198218,NM_198219,NM_005537,NM_024537,NM_198217	chr13,chr13,chr13,chr13,chr13	+,+,+,-,+	ING1,ING1,ING1,CARS2,ING1	1377,1392,3126,-5374,850
chr8:120885239-120885509	chr8	+	120885278	120885558	True	NM_024094,NM_022783	chr8,chr8	-,+	DSCC1,DEPTOR	-17108,341
chr4:36312126-36312539	chr4	+	36312126	36312574	True	NM_001170700,NM_015230	chr4,chr4	+,-	DTHD1,ARAP2	-26537,-66147
chr17:74239142-74240944	chr17	+	74239371	74240594	True	NM_052916,NM_182565	chr17,chr17	-,+	RNF157,FAM100B	-2981,20691
chr5:138941624-138942501	chr5	+	138941859	138942514	True	NM_003339,NM_181838,NM_198282	chr5,chr5,chr5	+,+,-	UBE2D2,UBE2D2,TMEM173	-1159,-1159,-79516
chr12:493479-494271	chr12	+	493507	494036	True	NM_001042603,NM_001130147,NM_001130148	chr12,chr12,chr12	-,+,+	KDM5A,CCDC77,CCDC77	4649,4479,4479
chr6:10718438-10720280	chr6	+	10718788	10719838	True	NM_001165258,NR_026736,NM_016462	chr6,chr6,chr6	+,-,+	TMEM14C,C6orf52,TMEM14C	3309,-23758,3309
chr6:137473669-137475656	chr6	+	137473689	137475338	True	NM_052962,NM_001008783	chr6,chr6	-,+	IL22RA2,SLC35D3	19498,-230338
chr22:39713285-39713530	chr22	+	39713290	39713503	True	NM_001033853,NM_000967,NR_000028,NR_002439,NR_000026,NR_000027,NM_145731	chr22,chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,-,-,+	RPL3,RPL3,SNORD83B,SNORD43,RNU86,SNORD83A,SYNGR1	2218,2218,-3374,1666,-389,-1978,32450
chr14:68286099-68286440	chr14	+	68286287	68286489	True	NM_133510,NM_015346,NM_133509,NM_002877	chr14,chr14,chr14,chr14	+,-,+,+	RAD51L1,ZFYVE26,RAD51L1,RAD51L1	6,-2981,6,6
chr17:33465621-33466944	chr17	+	33465949	33466985	True	NM_173167,NM_001014445,NM_001033576,NM_018096	chr17,chr17,chr17,chr17	+,-,+,-	UNC45B,NLE1,UNC45B,NLE1	7850,2387,7850,2387
chr1:183386393-183386603	chr1	+	183386488	183386562	True	NM_001174061,NM_015039	chr1,chr1	+,-	SMG7,NMNAT2	54943,1122
chr10:17659171-17659403	chr10	+	17659170	17659332	True	NM_003473,NM_014241	chr10,chr10	+,-	STAM,PTPLA	26791,91
chr15:85176253-85176692	chr15	+	85176425	85176669	True	NM_032856,NR_004859,NR_003654	chr15,chr15,chr15	-,+,+	WDR73,SCAND2,SCAND2	20902,-1785,-1785
chr2:32389441-32390433	chr2	+	32389624	32390267	True	NM_017964,NM_001193513,NM_001199138,NM_001193514,NM_001193515	chr2,chr2,chr2,chr2,chr2	+,+,-,+,+	SLC30A6,SLC30A6,NLRC4,SLC30A6,SLC30A6	642,642,99739,642,642
chr16:84077079-84077419	chr16	+	84077096	84077456	True	NM_001080442,NM_019065	chr16,chr16	-,+	SLC38A8,NECAB2	-1334,-74910
chr8:42123382-42124241	chr8	+	42123566	42124260	True	NM_001190720,NM_001190721,NM_001190722,NR_033818,NR_033819,NM_033011,NR_033820,NM_001556	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	+,+,+,+,+,-,+,+	IKBKB,IKBKB,IKBKB,IKBKB,IKBKB,PLAT,IKBKB,IKBKB	4575,4614,4559,4559,4559,-58372,4559,4559
chr10:75461758-75462053	chr10	+	75461776	75461868	True	NM_001144000,NM_004922	chr10,chr10	-,+	AGAP5,SEC24C	-4222,42262
chr10:75461758-75462053	chr10	+	46347248	46347340	False	NM_133446,NM_015262	chr10,chr10	-,+	AGAP4,FAM21C	-4327,-124651
chr10:75461758-75462053	chr10	+	51250862	51250954	False	NM_001077686,NM_002443	chr10,chr10	-,+	AGAP8,MSMB	-4327,298598
chr10:75461758-75462053	chr10	-	51743945	51744037	False	NM_001077665,NM_006327	chr10,chr10	+,-	AGAP6,TIMM23	4040,-120609
chr12:25070271-25071267	chr12	+	25070409	25071258	True	NM_001204126,NM_001178093	chr12,chr12	+,-	LRMP,BCAT1	133922,-14400
chr2:111231693-111232622	chr2	+	111231808	111232432	True	NR_037626,NR_038099,NR_027467,NM_001205288,NR_027145,NM_033514	chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-	LOC100507334,LOC100288695,LIMS3,LOC100288695,LIMS3-LOC440895,LIMS3	-228652,-1156,-1156,-1156,-1156,-1156
chr2:111231693-111232622	chr2	-	109269608	109270077	False	NM_001193485,NM_022336	chr2,chr2	+,-	LIMS1,EDAR	1189,335809
chr2:111231693-111232622	chr2	-	110654228	110654852	False	NR_036225,NR_038099,NR_027467,NM_001205288,NR_027145,NM_033514	chr2,chr2,chr2,chr2,chr2,chr2	-,+,+,+,+,+	MIR4267,LOC100288695,LIMS3,LOC100288695,LIMS3-LOC440895,LIMS3	172825,1156,1156,1156,1156,1156
chr3:52739871-52740089	chr3	+	52739871	52740063	True	NM_001010983,NM_152932,NM_014041,NM_018446	chr3,chr3,chr3,chr3	-,-,+,-	GLT8D1,GLT8D1,SPCS1,GLT8D1	35,-2249,-65,35
chr19:58987259-58987479	chr19	+	58987270	58987468	True	NM_017908,NM_003433,NM_014347	chr19,chr19,chr19	+,-,+	ZNF446,ZNF132,ZNF324	326,-35681,-8909
chr15:69855998-69856466	chr15	+	69856008	69856178	True	NR_026979,NR_030714	chr15,chr15	+,-	LOC145837,MIR629	-2013,515687
chrX:153860062-153861706	chrX	+	153860124	153861691	True	NR_027401,NM_139250,NR_027402	chrX,chrX,chrX	-,+,-	NCRNA00204,CTAG1A,NCRNA00204B	-23,-46757,-23
chrX:153860062-153861706	chrX	-	153799235	153800815	False	NM_001042351,NR_027401,NR_027402	chrX,chrX,chrX	-,+,+	G6PD,NCRNA00204,NCRNA00204B	-23448,23,23
chr21:17578467-17578890	chr21	+	17578578	17578818	True	NM_003489,NR_027791	chr21,chr21	-,+	NRIP1,C21orf34	-1141452,-11930
chr20:42819330-42819816	chr20	+	42819659	42819853	True	NM_024034,NM_175913,NM_020433	chr20,chr20,chr20	+,-,-	GDAP1L1,JPH2,JPH2	56054,-3441,-3441
chr2:166880376-166881328	chr2	+	166880771	166880993	True	NM_024969,NM_001165963	chr2,chr2	+,-	CSRNP3,SCN1A	-451983,49220
chr17:34256604-34257109	chr17	+	34256827	34257093	True	NM_001163124,NM_001163125,NM_001034836,NM_001163120,NM_001163121,NM_001163122,NM_001163130,NM_020426,NM_145654,NM_003487,NR_027999,NR_027998,NR_027997,NR_027996,NR_028000	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,-,-,-,-,+,-,-,-,-,-	RDM1,RDM1,RDM1,RDM1,RDM1,RDM1,RDM1,LYZL6,RDM1,TAF15,RDM1,RDM1,RDM1,RDM1,RDM1	260,260,737,737,737,260,260,9517,737,-120401,260,737,737,737,260
chr11:113745843-113746056	chr11	+	113745939	113745999	True	NM_006028,NM_020886	chr11,chr11	+,-	HTR3B,USP28	29589,307
chr2:240319996-240320532	chr2	+	240320044	240320498	True	NR_036229,NM_006037	chr2,chr2	+,-	MIR4269,HDAC4	-92951,2195
chr21:16437247-16437484	chr21	+	16437302	16437526	True	NM_003489,NM_013396	chr21,chr21	-,+	NRIP1,USP25	-176,664969
chr1:175889076-175890091	chr1	+	175889199	175890066	True	NM_021936,NR_002998	chr1,chr1	+,-	PAPPA2,SCARNA3	542240,47660
chr19:5569067-5570854	chr19	+	5569601	5570573	True	NM_001201338,NR_027064	chr19,chr19	+,-	SAFB,PLAC2	52472,-1596
chr10:30336027-30337368	chr10	+	30336380	30337354	True	NM_020848,NM_005204	chr10,chr10	-,+	KIAA1462,MAP3K8	11184,385511
chr16:85208403-85208822	chr16	+	85208640	85208719	True	NR_033984,NM_198491	chr16,chr16	+,-	LOC400548,FAM92B	-37935,-62526
chrX:100185200-100185840	chrX	+	100185312	100185790	True	NM_212559,NM_001012990	chrX,chrX	-,+	XKRX,ARL13A	-1414,38906
chr1:19991847-19992122	chr1	+	19991900	19992068	True	NM_181719,NM_000871	chr1,chr1	-,+	TMCO4,HTR6	134392,-171
chr1:223191197-223191451	chr1	+	223191295	223191365	True	NM_032890,NM_003268	chr1,chr1	+,-	DISP1,TLR5	-202925,125309
chr1:244639130-244639461	chr1	+	244639314	244639398	True	NM_173807,NM_001126	chr1,chr1	+,-	C1orf101,ADSS	-14702,-23878
chr3:100443906-100444851	chr3	+	100444238	100444867	True	NM_015429,NM_001195478	chr3,chr3	-,+	ABI3BP,TFG	267517,-15908
chr1:156030300-156030725	chr1	+	156030672	156030774	True	NM_020131,NM_014017,NM_001145264,NM_020387	chr1,chr1,chr1,chr1	-,+,+,+	UBQLN4,LAMTOR2,LAMTOR2,RAB25	-7156,-6206,-6206,191
chr21:40037415-40038611	chr21	+	40037752	40038412	True	NM_005239,NM_004449,NM_001136154	chr21,chr21,chr21	+,-,-	ETS2,ERG,ERG	139436,-4048,-4048
chr10:73725229-73725477	chr10	+	73725290	73725518	True	NM_002778,NM_004273	chr10,chr10	-,+	PSAP,CHST3	-114208,-1221
chr17:19093865-19094860	chr17	+	19094041	19094868	True	NM_006613,NM_001102664	chr17,chr17	-,+	GRAP,EPN2	-143705,45821
chr17:19093865-19094860	chr17	-	19090018	19090845	False	NM_006613,NM_001102664	chr17,chr17	-,+	GRAP,EPN2	-139682,49844
chr17:19093865-19094860	chr17	+	19016432	19017259	False	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	13522,-66096
chr17:19093865-19094860	chr17	-	18963914	18964741	False	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	66040,-13578
chr17:19093865-19094860	chr17	+	18967946	18968773	False	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	62008,-17610
chr4:8451784-8452615	chr4	+	8451948	8452482	True	NM_152544,NM_001101667,NM_003501	chr4,chr4,chr4	+,-,-	METTL19,ACOX3,ACOX3	-9473,-9496,-9496
chr1:113162562-113164085	chr1	+	113162747	113163707	True	NM_006135,NM_138728,NM_138729,NM_017744,NM_138727	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	CAPZA1,ST7L,ST7L,ST7L,ST7L	-723,-707,-707,-707,-707
chr9:101559151-101560039	chr9	+	101559233	101559493	True	NM_173551,NM_024642	chr9,chr9	-,+	ANKS6,GALNT12	-439,10487
chr1:155557457-155558808	chr1	+	155557667	155558772	True	NM_018116,NM_018489	chr1,chr1	+,-	MSTO1,ASH1L	21234,-25343
chr1:155557457-155558808	chr1	+	155680498	155680965	False	NM_139118,NM_033657	chr1,chr1	-,+	YY1AP1,DAP3	-21675,-21664
chr22:32150468-32151179	chr22	+	32150541	32151202	True	NM_001007188,NM_014662,NM_001136029,NM_173566	chr22,chr22,chr22,chr22	+,+,+,-	DEPDC5,DEPDC5,DEPDC5,PRR14L	-523,-523,-105,-4421
chr6:116694802-116695829	chr6	+	116694833	116695659	True	NM_003309,NM_013352	chr6,chr6	-,+	TSPYL1,DSE	-93553,-2774
chr3:52230693-52231345	chr3	+	52230768	52231384	True	NM_017442,NM_199166,NM_000688	chr3,chr3,chr3	-,+,+	TLR9,ALAS1,ALAS1	28845,731,759
chr20:49255498-49255952	chr20	+	49255791	49255921	True	NR_030375,NM_080829	chr20,chr20	+,-	MIR645,FAM65C	-53519,-2365
chr20:49255498-49255952	chr20	-	49386943	49386993	False	NM_080829,NM_001010974	chr20,chr20	-,+	FAM65C,BCAS4	-133517,24473
chr20:43596512-43597065	chr20	+	43596533	43596738	True	NM_006809,NM_006282	chr20,chr20	-,+	TOMM34,STK4	-7419,-1478
chr19:53633990-53635188	chr19	+	53634196	53635097	True	NM_001164309,NR_028343,NM_001191055,NM_018355,NM_001136038	chr19,chr19,chr19,chr19,chr19	-,-,+,-,-	ZNF415,ZNF415,HERV-V2,ZNF415,ZNF415	1124,1126,-86256,1098,1124
chr2:46768337-46768936	chr2	+	46768419	46768832	True	NM_080653,NM_012249	chr2,chr2	-,+	ATP6V1E2,RHOQ	-21323,1034
chr20:2278538-2279556	chr20	+	2278549	2279543	True	NR_003684,NM_003245	chr20,chr20	-,+	SNORD119,TGM3	164200,-1989
chr5:62072561-62073024	chr5	+	62072571	62073035	True	NM_181506,NM_014473	chr5,chr5	+,-	LRRC70,DIMT1L	-198073,-372843
chr5:62072561-62073024	chr2	+	129276246	129276696	False	NM_004807,NR_027671	chr2,chr2	-,+	HS6ST1,UGGT1	-200075,-427855
chr5:62072561-62073024	chr9	+	88880842	88880954	False	NM_024635,NM_001010907	chr9,chr9	+,-	NAA35,C9orf153	-324846,-6323
chr10:88720251-88721300	chr10	+	88720436	88721344	True	NM_003087,NM_024756,NM_133447,NM_006829	chr10,chr10,chr10,chr10	+,-,+,+	SNCG,MMRN2,AGAP11,C10orf116	-2199,-3011,9153,6843
chr14:74960429-74960723	chr14	+	74960546	74960712	True	NM_194279,NM_006432	chr14,chr14	+,-	ISCA2,NPC2	-147,-462
chr11:2397771-2398059	chr11	+	2397809	2398029	True	NM_004356,NM_014555	chr11,chr11	+,-	CD81,TRPM5	517,46296
chr12:51742252-51744047	chr12	+	51742318	51744066	True	NM_001971,NM_004858	chr12,chr12	-,+	CELA1,SLC4A8	-1855,74527
chr9:102667481-102668252	chr9	+	102667696	102668278	True	NM_017919,NM_015051	chr9,chr9	+,-	STX17,ERP44	636,193102
chr16:30035552-30035915	chr16	+	30035737	30035801	True	NM_031478,NM_001109660,NM_001109659	chr16,chr16,chr16	-,+,+	FAM57B,C16orf92,C16orf92	6435,-1133,-1133
chr9:2835272-2837230	chr9	+	2835695	2837197	True	NM_133497,NM_014878	chr9,chr9	+,-	KCNV2,KIAA0020	-118221,6983
chr11:134123983-134124327	chr11	+	134124110	134124346	True	NM_001037304,NM_001037305,NM_199297,NM_014384,NM_014174,NM_199298	chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,+,-,-	THYN1,THYN1,THYN1,ACAD8,THYN1,THYN1	-850,-850,-850,-727,-850,-850
chr5:156689890-156690768	chr5	+	156690111	156690671	True	NM_001037333,NM_001037332,NM_001001343,NM_014376	chr5,chr5,chr5,chr5	+,+,-,+	CYFIP2,CYFIP2,FNDC9,CYFIP2	2419,2515,82108,5690
chr12:121077472-121078020	chr12	+	121077561	121077933	True	NM_001033677,NM_198202	chr12,chr12	+,-	CABP1,POP5	488,-58360
chr2:32580400-32581541	chr2	+	32580847	32581579	True	NM_021209,NM_016252	chr2,chr2	-,+	NLRC4,BIRC6	-90035,516
chr19:19976233-19976604	chr19	+	19976494	19976652	True	NM_021047,NM_001145404	chr19,chr19	+,-	ZNF253,ZNF506	61,-43934
chr7:30073918-30075351	chr7	+	30074055	30075045	True	NM_017946,NM_032639,NM_001197026,NM_001197027	chr7,chr7,chr7,chr7	-,+,+,+	FKBP14,PLEKHA8,PLEKHA8,PLEKHA8	-7787,-6133,-6133,-6133
chr3:111479955-111480643	chr3	+	111480062	111480659	True	NM_024508,NM_001134437	chr3,chr3	-,+	ZBED2,PHLDB2	-165896,-28794
chrX:48327217-48327527	chrX	+	48327358	48327498	True	NM_012280,NM_033518,NM_177439,NM_177434	chrX,chrX,chrX,chrX	+,-,+,+	FTSJ1,SLC38A5,FTSJ1,FTSJ1	7050,1196,7050,8881
chr6:44284564-44285069	chr6	+	44284569	44284782	True	NM_145026,NM_020745	chr6,chr6	+,-	SPATS1,AARS2	25614,-3506
chr1:168145253-168146274	chr1	+	168145628	168145739	True	NM_153832,NM_001031800,NM_152902	chr1,chr1,chr1	-,+,+	GPR161,TIPRL,TIPRL	-40004,2431,2431
chr10:6189713-6191270	chr10	+	6189930	6191252	True	NM_001145443,NR_036111,NM_000417	chr10,chr10,chr10	+,+,-	PFKFB3,MIR3155,IL2RA	-3139,2906,-85597
chr5:54529788-54530013	chr5	+	54529835	54530018	True	NM_021147,NM_001190787,NM_015360	chr5,chr5,chr5	-,-,+	CCNO,LOC345643,SKIV2L2	-327,-6692,73557
chr16:2793563-2794223	chr16	+	2793661	2794181	True	NM_016333,NR_027274,NR_027275	chr16,chr16,chr16	+,-,-	SRRM2,LOC100128788,LOC100128788	8148,667,8470
chr12:24102334-24102845	chr12	+	24102352	24102633	True	NR_030625,NM_006940	chr12,chr12	+,-	MIR920,SOX5	262721,61
chr17:37991710-37992617	chr17	+	37991725	37992599	True	NM_012481,NM_198844	chr17,chr17	-,+	IKZF3,ZPBP2	27892,31855
chr11:916057-916455	chr11	+	916066	916204	True	NM_012305,NM_001142675,NM_001142674,NM_001142677,NM_001142676,NM_023947	chr11,chr11,chr11,chr11,chr11,chr11	+,-,-,-,-,-	AP2A2,CHID1,CHID1,CHID1,CHID1,CHID1	9636,-1008,-5192,-5192,-5192,-5192
chr22:28693321-28693605	chr22	+	28693460	28693618	True	NR_036169,NR_036170	chr22,chr22	-,+	MIR3199-1,MIR3199-2	-376860,-377011
chr1:87250616-87250975	chr1	+	87250762	87251014	True	NM_016009,NM_004261	chr1,chr1	+,-	SH3GLB1,SEP15	-80556,129143
chr17:43974388-43974591	chr17_ctg5_hap1	-	893043	893187	False	NM_016835,NM_016834,NM_005910,NR_024559,NM_001123067,NM_001123066,NM_016841,NR_024560,NM_001203251,NM_001203252	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	-,-,-,+,-,-,-,-,-,-	MAPT,MAPT,MAPT,LOC100128977,MAPT,MAPT,MAPT,LOC100130148,MAPT,MAPT	2693,2693,2693,1506,2693,2693,2693,1287,2693,2693
chr17:43974388-43974591	chr17	+	43974388	43974532	True	NM_016835,NM_016834,NM_005910,NR_024559,NM_001123067,NM_001123066,NM_016841,NR_024560,NM_001203251,NM_001203252	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,-,+,+,+,+,+,+	MAPT,MAPT,MAPT,LOC100128977,MAPT,MAPT,MAPT,LOC100130148,MAPT,MAPT	-2691,-2691,-2691,-1509,-2691,-2691,-2691,-1290,-2691,-2691
chr22:25057710-25058806	chr22	+	25058214	25058703	True	NR_024593,NR_024494	chr22,chr22	-,+	POM121L10P,BCRP3	-3100,-29383
chr14:102144061-102145779	chr14	+	102144169	102145731	True	NR_026774,NR_031649	chr14,chr14	+,-	NCRNA00239,MIR1247	51042,-117410
chr2:132553816-132554695	chr2	+	132554353	132554651	True	NM_013310,NM_214461	chr2,chr2	+,-	C2orf27A,C2orf27B	-74340,4633
chr2:132553816-132554695	chr2	-	132522858	132522920	False	NM_013310,NM_214461	chr2,chr2	+,-	C2orf27A,C2orf27B	-42845,36364
chr19:20369095-20369442	chr19	+	20369125	20369479	True	NM_052852,NR_036053	chr19,chr19	+,-	ZNF486,MIR1270-1	-91093,140734
chr11:75238023-75238820	chr11	+	75238120	75238796	True	NM_030792,NM_001235	chr11,chr11	-,+	GDPD5,SERPINH1	-1521,34373
chr1:145527143-145527736	chr1	+	145527367	145527607	True	NR_002328,NM_003637	chr1,chr1	-,+	GNRHR2,ITGA10	-11291,-2428
chr4:25656284-25656693	chr4	+	25656379	25656599	True	NM_015187,NM_001177998,NM_001177999,NM_006424	chr4,chr4,chr4,chr4	-,+,+,+	SEL1L3,SLC34A2,SLC34A2,SLC34A2	208061,835,1486,835
chr4:25655742-25656284	chr4	+	25655899	25656315	True	NM_015187,NM_001177998,NM_001177999,NM_006424	chr4,chr4,chr4,chr4	-,+,+,+	SEL1L3,SLC34A2,SLC34A2,SLC34A2	208345,1119,1770,1119
chrX:119492489-119492722	chrX	+	119492528	119492704	True	NM_017938,NM_001142447,NM_012069	chrX,chrX,chrX	-,+,+	FAM70A,ATP1B4,ATP1B4	-47137,3235,3235
chr12:131719344-131719569	chr12	+	131719357	131719609	True	NR_026670,NM_194356	chr12,chr12	+,-	LOC116437,STX2	-69852,-395546
chr12:131719344-131719569	chr12	-	131913972	131914216	False	NR_026670,NM_194356	chr12,chr12	+,-	LOC116437,STX2	-264467,-590161
chr3:121315384-121315866	chr3	+	121315410	121315887	True	NM_199420,NM_016298	chr3,chr3	-,+	POLQ,FBXO40	-50557,-3304
chr9:36191580-36193430	chr9	+	36191615	36193395	True	NM_001190383,NM_001184761,NM_001184760,NM_007096,NM_001076677,NM_001184762,NM_001833	chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,+,+,+,+,+,+	GNE,CLTA,CLTA,CLTA,CLTA,CLTA,CLTA	65164,-820,-820,-820,-820,-820,-820
chr2:63646568-63647523	chr2	+	63646574	63646999	True	NM_015910,NM_005917	chr2,chr2	-,+	WDPCP,MDH1	168920,168743
chr17:34901369-34901675	chr17	+	34901458	34901698	True	NM_024835,NM_001033580	chr17,chr17	+,-	GGNBP2,MYO19	-772,-10153
chr1:33421272-33421686	chr1	+	33421369	33421557	True	NM_002143,NM_001127361,NM_153341	chr1,chr1,chr1	+,-,-	HPCA,RNF19B,RNF19B	-69323,8787,8787
chr9:112179942-112180530	chr9	+	112179984	112180484	True	NR_026918,NM_001037293	chr9,chr9	-,+	PTPN3,PALM2	-11,222583
chr2:88664439-88665267	chr2	+	88664495	88665063	True	NM_152670,NM_001135649	chr2,chr2	+,-	C2orf51,FOXI3	159105,87040
chr11:65627183-65627565	chr11	+	65627193	65627475	True	NM_025128,NM_005507	chr11,chr11	+,-	MUS81,CFL1	396,-1389
chr19:54972725-54973604	chr19	+	54972820	54973588	True	NM_198988,NM_052925	chr19,chr19	-,+	LENG9,LENG8	1356,-12806
chr9:116039386-116041303	chr9	+	116039386	116041287	True	NM_139286,NM_004697	chr9,chr9	-,+	CDC26,PRPF4	-1517,-1467
chr11:101795796-101796206	chr11	+	101795801	101796227	True	NM_020802,NM_178127	chr11,chr11	+,-	KIAA1377,ANGPTL5	-10106,-8548
chr1:156474177-156474657	chr1	+	156474213	156474532	True	NM_001105669,NM_005920	chr1,chr1	+,-	TTC24,MEF2D	74986,-3684
chr8:29958056-29959882	chr8	+	29958313	29959725	True	NM_001128208,NM_016127,NM_015344	chr8,chr8,chr8	+,-,+	LEPROTL1,TMEM66,LEPROTL1	-5452,-17664,-5452
chr16:4465542-4465809	chr16	+	4465555	4465761	True	NM_001201473,NM_001201472,NM_001201479,NM_024535,NM_001135110	chr16,chr16,chr16,chr16,chr16	-,-,-,-,+	CORO7,CORO7,CORO7-PAM16,CORO7,DNAJA3	1251,1251,1251,1251,10096
chr14:105189058-105189708	chr14	+	105189092	105189746	True	NM_199165,NM_005163,NM_152328	chr14,chr14,chr14	+,-,+	ADSSL1,AKT1,ADSSL1	6481,70242,787
chr17:80710619-80710820	chr17	+	80710641	80710839	True	NM_005993,NM_006822	chr17,chr17	+,-	TBCD,RAB40B	-752,-54043
chr16:21313282-21315112	chr16	+	21313454	21315162	True	NR_026675,NM_001014444,NM_001888	chr16,chr16,chr16	+,-,-	NCRNA00169,CRYM,CRYM	-1335,-204,-204
chr6:26214632-26215161	chr6	+	26214692	26215025	True	NM_003545,NM_003518,NM_021052	chr6,chr6,chr6	+,-,+	HIST1H4E,HIST1H2BG,HIST1H2AE	-9870,1906,2122
chr9:138591619-138591962	chr9	+	138591626	138591994	True	NM_020822,NM_001012415,NM_001101677	chr9,chr9,chr9	+,-,-	KCNT1,SOHLH1,SOHLH1	2036,-252,-252
chrX:10628691-10629646	chrX	+	10628692	10629275	True	NM_001122608,NM_001098624	chrX,chrX	+,-	HCCS,MID1	500130,16565
chr17:37711774-37713474	chr17	+	37711805	37713323	True	NM_032192,NM_006160	chr17,chr17	+,-	PPP1R1B,NEUROD2	69855,50902
chr7:32110237-32110471	chr7	+	32110243	32110405	True	NM_006658,NM_001191057,NM_001191056,NM_001191059,NM_005020	chr7,chr7,chr7,chr7,chr7	+,-,-,-,-	C7orf16,PDE1C,PDE1C,PDE1C,PDE1C	-383663,111,111,625,690
chr12:8971070-8972960	chr12	+	8971069	8972552	True	NM_144670,NM_002355	chr12,chr12	+,-	A2ML1,M6PR	2597,129750
chr19:35488105-35489298	chr19	+	35488157	35489174	True	NM_175872,NM_001136199,NM_020895	chr19,chr19,chr19	-,+,+	ZNF792,GRAMD1A,GRAMD1A	-33204,2071,2071
chr8:67938921-67940104	chr8	+	67939513	67940153	True	NM_024790,NM_001013626	chr8,chr8	+,-	CSPP1,LRRC67	36449,683
chr5:78365705-78366050	chr5	+	78365783	78366071	True	NM_001178005,NM_013391,NM_017614	chr5,chr5,chr5	+,-,+	BHMT2,DMGDH,BHMT2	-287,-334,-287
chr6:53399496-53400611	chr6	+	53399594	53400660	True	NM_001498,NM_018214,NM_001197115	chr6,chr6,chr6	-,+,-	GCLC,LRRC1,GCLC	9317,259117,9317
chr9:133569527-133569827	chr9	+	133569536	133569872	True	NM_014285,NR_027440	chr9,chr9	+,-	EXOSC2,LOC100272217	-429,-114655
chr3:48507506-48508075	chr3	+	48507591	48508071	True	NM_033629,NM_024661,NM_016381	chr3,chr3,chr3	+,-,+	TREX1,CCDC51,TREX1	-413,-26062,-413
chr8:37823230-37823522	chr8	+	37823277	37823513	True	NM_000025,NM_004095	chr8,chr8	-,+	ADRB3,EIF4EBP1	721,64506
chr12:6773746-6773946	chr12	+	6773776	6773999	True	NM_001127586,NM_001164094,NM_001127584,NM_001127585,NM_001127582,NM_001127583,NM_016162	chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,+,-,-,-,-,-	ING4,COPS7A,ING4,ING4,ING4,ING4,ING4	-1468,59150,-1468,-1468,-1468,-1468,-1468
chr6:137475674-137476019	chr6	+	137475813	137476012	True	NM_052962,NM_001008783	chr6,chr6	-,+	IL22RA2,SLC35D3	18824,-232475
chrX:153674496-153675044	chrX	+	153674560	153675044	True	NM_004699,NM_001493,NM_006014	chrX,chrX,chrX	+,+,-	FAM50A,GDI1,LAGE3	-2126,-9352,32602
chrX:52928674-52929089	chrX	+	52928770	52929066	True	NM_014138,NM_133179,NM_001099684	chrX,chrX,chrX	+,-,+	FAM156A,XAGE3,FAM156B	-966,-31651,-419
chrX:52928674-52929089	chrX	-	52984971	52985267	False	NM_014138,NM_001099684	chrX,chrX	-,-	FAM156A,FAM156B	966,419
chr11:122073553-122073804	chr11	+	122073562	122073786	True	NM_032873,NR_024430	chr11,chr11	+,-	UBASH3B,MIR100HG	452611,34
chr17:7212210-7212487	chr17	+	7212214	7212450	True	NM_001970,NM_001143761,NM_001143762,NM_001143760,NM_004489	chr17,chr17,chr17,chr17,chr17	+,+,+,+,-	EIF5A,EIF5A,EIF5A,EIF5A,GPS2	-1409,-977,-571,-1947,6258
chr22:41810512-41811172	chr22	+	41810514	41811066	True	NM_016272,NM_003216	chr22,chr22	-,+	TOB2,TEF	32011,-32602
chr17:33303411-33303871	chr17	+	33303430	33303919	True	NM_006584,NM_013975,NM_002311	chr17,chr17,chr17	-,+,+	CCT6B,LIG3,LIG3	-14902,3597,3597
chr1:6419106-6419622	chr1	+	6419128	6419438	True	NM_031475,NM_181865,NM_181866	chr1,chr1,chr1	+,-,-	ESPN,ACOT7,ACOT7	65409,1376,-124
chr8:144716732-144717685	chr8	+	144716748	144717690	True	NM_001082480,NM_003313	chr8,chr8	+,-	ZNF623,TSTA3	682,-17016
chr1:21837210-21837462	chr1	+	21837226	21837488	True	NM_001177520,NM_001145658,NM_000478,NM_001127501	chr1,chr1,chr1,chr1	+,-,+,+	ALPL,RAP1GAP,ALPL,ALPL	-1419,140910,-1419,-1419
chr11:7533728-7534781	chr11	+	7533861	7534773	True	NM_003621,NM_016229	chr11,chr11	+,-	PPFIBP2,CYB5R2	227,160098
chr5:112072533-112073247	chr5	+	112072735	112073245	True	NM_001127510,NM_000038,NM_005669	chr5,chr5,chr5	+,+,-	APC,APC,REEP5	310,310,184844
chr16:67925826-67927219	chr16	+	67926296	67927170	True	NM_006742,NM_001907,NM_198443	chr16,chr16,chr16	+,-,+	PSKH1,CTRL,NRN1L	4,38658,-7566
chr14:67879113-67879723	chr14	+	67879114	67879332	True	NM_016445,NM_004094	chr14,chr14	-,+	PLEK2,EIF2S1	-286,-52131
chr5:18048207-18049590	chr5	+	18048223	18049458	True	NR_033975,NM_006317	chr5,chr5	-,+	LOC401177,BASP1	-660804,-830528
chr11:60463802-60465148	chr11	+	60464577	60465193	True	NM_004778,NM_031457	chr11,chr11	-,+	GPR44,MS4A8B	158307,1853
chr15:55882231-55882645	chr15	+	55882402	55882505	True	NM_001198784,NM_015617	chr15,chr15	+,-	FLJ27352,PYGO1	-181737,-1352
chr1:89483684-89484164	chr1	+	89484052	89484115	True	NM_018284,NM_006256	chr1,chr1	-,+	GBP3,PKN2	4485,-334181
chr7:122487438-122488849	chr7	+	122487437	122488880	True	NM_001009571,NR_036484	chr7,chr7	-,+	CADPS2,LOC154860	37988,-543788
chr4:113214159-113215088	chr4	+	113214217	113214945	True	NM_001102406,NM_052864,NM_025144	chr4,chr4,chr4	+,-,+	ALPK1,TIFA,ALPK1	3553,-7158,3553
chr14:24423796-24424158	chr14	+	24424004	24424196	True	NR_023924,NR_023922,NR_023923,NM_021004,NR_023921	chr14,chr14,chr14,chr14,chr14	-,-,-,+,-	C14orf167,C14orf167,C14orf167,DHRS4,C14orf167	-612,152,-612,-1090,-612
chr16:58005233-58005532	chr16	+	58005253	58005569	True	NM_001297,NM_199456,NM_199046,NM_001135639	chr16,chr16,chr16,chr16	-,+,+,-	CNGB1,TEPP,TEPP,CNGB1	-233,4769,4769,-233
chr6:52428237-52429180	chr6	+	52428729	52429098	True	NM_012288,NR_024403	chr6,chr6	-,+	TRAM2,LOC730101	12815,100100
chr10:96540012-96541613	chr10	+	96540029	96541236	True	NM_000770,NM_000769	chr10,chr10	-,+	CYP2C8,CYP2C19	288079,-17627
chr19:40265300-40267089	chr19	+	40265780	40267097	True	NM_001828,NM_001143832	chr19,chr19	-,+	CLC,LEUTX	-37112,136
chr2:96970561-96971258	chr2	+	96970563	96971167	True	NM_014014,NM_001008949	chr2,chr2	-,+	SNRNP200,ITPRIPL1	190,19894
chr6:89659139-89660668	chr6	+	89659271	89660039	True	NM_006813,NM_003800	chr6,chr6	+,-	PNRC1,RNGTT	130389,13359
chr9:109936935-109937233	chr9	+	109937020	109937276	True	NM_002874,NR_031752	chr9,chr9	+,-	RAD23B,MIR548Q	108267,-88304
chr17:77748955-77750380	chr17	+	77749152	77750416	True	NM_005189,NM_020649,NM_032647	chr17,chr17,chr17	+,-,+	CBX2,CBX8,CBX2	1560,20549,1560
chr22:19110552-19111125	chr22	+	19110647	19111132	True	NM_053006,NM_005137,NM_001173533,NM_001184781,NM_001173534,NR_033674	chr22,chr22,chr22,chr22,chr22,chr22	+,-,-,-,-,-	TSSK2,DGCR2,DGCR2,DGCR2,DGCR2,DGCR2	7188,-680,-680,-680,-680,-680
chr11:92708197-92708781	chr11	+	92708269	92708733	True	NM_152313,NM_005959	chr11,chr11	-,+	SLC36A4,MTNR1B	222412,-5531
chr17:79987554-79988050	chr17	+	79987619	79988023	True	NM_016286,NM_005052,NM_001195218,NM_144998,NM_144999	chr17,chr17,chr17,chr17,chr17	-,+,-,-,+	DCXR,RAC3,DCXR,STRA13,LRRC45	7600,1508,7600,-6846,-6390
chr1:947749-948126	chr1	+	947828	948101	True	NM_005101,NM_001142467,NM_198576	chr1,chr1,chr1	+,-,+	ISG15,HES4,AGRN	745,-12276,7401
chr4:25161316-25161791	chr4	+	25161460	25161806	True	NR_037934,NM_016955	chr4,chr4	+,-	LOC285540,SEPSECS	487,448
chr4:6763550-6763869	chr4	+	6763571	6763895	True	NM_001100590,NM_203462	chr4,chr4	+,-	KIAA0232,MRFAP1L1	20563,-51965
chr9:125881538-125883004	chr9	+	125881612	125882746	True	NR_030331,NM_005294,NR_026677	chr9,chr9,chr9	-,+,-	MIR600,GPR21,NCRNA00287	-7690,-84820,-3856
chr4:57459735-57460427	chr4	+	57459895	57460444	True	NM_001145459,NM_206919	chr4,chr4	-,+	HOPX,ARL9	62303,-88571
chr1:48449879-48450171	chr1	+	48449952	48450150	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	12462,238206
chr16:21532514-21532807	chr16	+	21532605	21532771	True	NM_001077180,NR_002594	chr16,chr16	+,-	METTL9,SLC7A5P2	78084,-840
chr16:21532514-21532807	chr16	+	87903942	87904011	False	NM_001173539,NM_003486	chr16,chr16	+,-	BANP,SLC7A5	81026,-842
chr16:21532514-21532807	chr16	+	29625873	29625981	False	NR_002593,NM_001030288	chr16,chr16	-,+	SLC7A5P1,SPN	-835,48318
chr14:89259609-89259839	chr14	+	89259628	89259716	True	NM_183387,NM_144596	chr14,chr14	-,+	EML5,TTC8	-532,31261
chr1:200717037-200719036	chr1	+	200717135	200719072	True	NM_203459,NM_001031725	chr1,chr1	+,-	CAMSAP1L1,DDX59	-8501,-78009
chr14:92410393-92411547	chr14	+	92410673	92411133	True	NM_006329,NM_017437	chr14,chr14	-,+	FBLN5,CPSF2	2965,177164
chr6:14944198-14945499	chr6	+	14944473	14945259	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	301267,718091
chr1:47398481-47399683	chr1	+	47398592	47399559	True	NM_000778,NM_178033	chr1,chr1	-,+	CYP4A11,CYP4X1	7648,89680
chr1:155265498-155265845	chr1	+	155265503	155265835	True	NM_001135822,NM_000298,NM_181871	chr1,chr1,chr1	+,-,-	FDPS,PKLR,PKLR	12703,5440,5007
chr1:27155484-27157153	chr1	+	27155680	27157003	True	NM_018066,NM_032283	chr1,chr1	-,+	GPN2,ZDHHC18	59923,-2530
chr3:37460641-37461921	chr3	+	37460914	37461774	True	NM_178339,NM_017724	chr3,chr3	+,-	C3orf35,LRRFIP2	-19998,-243063
chr19:3046609-3047320	chr19	+	3046779	3047269	True	NM_001144761,NM_002067	chr19,chr19	-,+	TLE2,GNA11	414,47138
chr7:138602777-138603137	chr7	+	138602807	138603163	True	NM_001164665,NM_001085429	chr7,chr7	-,+	KIAA1549,TMEM213	62951,-120119
chr2:54278929-54280351	chr2	+	54279459	54280392	True	NM_014614,NM_138448	chr2,chr2	-,+	PSME4,ACYP2	-81482,62017
chr7:128165395-128165693	chr7	+	128165443	128165719	True	NM_183243,NM_018396	chr7,chr7	-,+	IMPDH1,METTL2B	-115407,-48718
chr7:128165395-128165693	chr17	+	60550193	60550322	False	NR_027486,NM_001112707,NM_006852	chr17,chr17,chr17	-,+,+	TBC1D3P2,TLK2,TLK2	-197177,6063,6063
chr16:1361111-1361765	chr16	+	1361187	1361347	True	NM_194261,NM_194259,NM_001001410,NM_003345,NM_194260	chr16,chr16,chr16,chr16,chr16	+,+,-,+,+	UBE2I,UBE2I,C16orf42,UBE2I,UBE2I	-2064,-1606,40576,-1606,-1883
chr5:177398062-177398340	chr5	+	177398229	177398329	True	NM_006261,NM_001079527	chr5,chr5	-,+	PROP1,FAM153C	24964,37359
chr8:7312863-7313545	chr8	+	7312993	7313562	True	NM_001040703,NM_016512,NM_058206,NM_058207,NM_058200,NM_058201,NM_058202,NM_058203	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	+,-,-,-,-,-,-,-	DEFB105B,SPAG11B,SPAG11B,SPAG11B,SPAG11B,SPAG11B,SPAG11B,SPAG11B	31680,7687,-3106,-3106,7687,7687,7687,7687
chr8:7312863-7313545	chr8	-	7713028	7713597	False	NM_152250,NM_001081552,NM_058203	chr8,chr8,chr8	-,+,+	DEFB105A,SPAG11A,SPAG11B	-31668,-7684,-7684
chr15:80444891-80445257	chr15	+	80445220	80445288	True	NM_000137,NM_004049	chr15,chr15	+,-	FAH,BCL2A1	52,-181577
chr7:65123248-65124281	chr7	+	65123384	65123918	True	NM_000181,NR_027392	chr7,chr7	-,+	GUSB,INTS4L2	323445,-10658
chr7:65123248-65124281	chr7	+	64612197	64612695	False	NR_027393,NM_001007253	chr7,chr7	+,-	INTS4L1,ERV3	-10656,-145073
chr7:65123248-65124281	chr7	-	65008562	65009096	False	NM_000181,NR_027392	chr7,chr7	-,+	GUSB,INTS4L2	438255,103680
chr20:4982312-4982785	chr20	+	4982519	4982693	True	NM_005116,NR_028370,NM_203327	chr20,chr20,chr20	-,+,-	SLC23A2,PCNA-AS1,SLC23A2	-374,117538,8296
chr9:131182020-131182240	chr9	+	131182049	131182153	True	NR_029837,NM_016174	chr9,chr9	-,+	MIR219-2,CERCAM	-27056,605
chrX:44729591-44730137	chrX	+	44729741	44729997	True	NM_173794,NM_021140	chrX,chrX	-,+	FUNDC1,KDM6A	-327520,2425
chr8:145642293-145642548	chr8	+	145642298	145642388	True	NM_130849,NM_017767,NM_174922,NM_013291	chr8,chr8,chr8,chr8	-,-,+,-	SLC39A4,SLC39A4,ADCK5,CPSF1	-25,-381,-44618,-7565
chr3:50378747-50380358	chr3	+	50378974	50380062	True	NM_015896,NM_007022,NM_006545,NM_170712,NM_170713,NM_007182,NM_170714	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-,-	ZMYND10,CYB561D2,NPRL2,RASSF1,RASSF1,RASSF1,RASSF1	3144,8234,8474,-3310,-4079,-607,-607
chr8:30704108-30705976	chr8	+	30704146	30706000	True	NM_031271,NM_005671	chr8,chr8	-,+	TEX15,UBXN8	583,-102507
chr22:50920797-50921007	chr22	+	50920904	50920994	True	NM_024866,NM_017584,NM_002972	chr22,chr22,chr22	+,+,-	ADM2,MIOX,SBF1	-943,4218,-7440
chr20:55904826-55905120	chr20	+	55904941	55905117	True	NM_198265,NM_012444,NR_036219	chr20,chr20,chr20	+,+,-	SPO11,SPO11,MIR4325	-161,-161,-8294
chr11:103004611-103006487	chr11	+	103004687	103006316	True	NM_001377,NM_032299	chr11,chr11	+,-	DYNC2H1,DCUN1D5	-24581,-41743
chr6:170200597-170200936	chr6	+	170200640	170200902	True	NR_026781,NR_026780	chr6,chr6	-,+	NCRNA00242,C6orf208	-1719,-10522
chr22:50351974-50352204	chr22	+	50352049	50352130	True	NM_024105,NM_001001852	chr22,chr22	-,+	ALG12,PIM3	-39943,2012
chr18:31207030-31207605	chr18	+	31207039	31207650	True	NM_030632,NM_198995	chr18,chr18	+,-	ASXL3,C18orf34	-48549,-186354
chr3:49459980-49461373	chr3	+	49460214	49461282	True	NR_028435,NM_022171,NM_000481,NM_032316,NM_001164712,NM_001164710,NM_001164711	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-,-	AMT,TCTA,AMT,NICN1,AMT,AMT,AMT	-103,-10626,-103,5525,-103,-103,-103
chr11:47399581-47399848	chr11	+	47399582	47399862	True	NM_003120,NM_001128225,NM_001080547	chr11,chr11,chr11	-,+,-	SPI1,SLC39A13,SPI1	315,30183,315
chr10:13546362-13547195	chr10	+	13546415	13547225	True	NM_003675,NM_152751,NM_001100912	chr10,chr10,chr10	+,-,-	PRPF18,BEND7,BEND7	81713,-1439,-1439
chr6:4853163-4853546	chr6	+	4853369	4853599	True	NM_001143970,NM_006638	chr6,chr6	+,-	CDYL,RPP40	-17088,150728
chr16:3997293-3997692	chr16	+	3997297	3997733	True	NM_005223,NM_004380	chr16,chr16	+,-	DNASE1,CREBBP	-294408,-67176
chr19:15050523-15051880	chr19	+	15050672	15051304	True	NM_005071,NM_012377	chr19,chr19	-,+	SLC1A6,OR7C2	32476,996
chr11:116643823-116644136	chr11	+	116643937	116644179	True	NM_001159736,NM_032725,NM_000040	chr11,chr11,chr11	-,-,+	BUD13,BUD13,APOC3	-223,-223,56444
chr10:46011959-46013056	chr10	+	46012256	46012695	True	NM_001002266,NM_000698	chr10,chr10	-,+	MARCH8,ALOX5	18175,-142690
chr2:232328952-232329154	chr2	+	232329004	232329196	True	NR_002921,NM_005381,NR_004398,NM_145236,NR_002908	chr2,chr2,chr2,chr2,chr2	-,-,-,+,-	SNORA75,NCL,SNORD82,B3GNT7,SNORD20	-8357,59,-3851,-68720,-7770
chr4:122872238-122872452	chr4	+	122872266	122872380	True	NM_001130698,NM_005033	chr4,chr4	-,+	TRPC3,EXOSC9	579,-149845
chr16:8802194-8802637	chr16	+	8802439	8802679	True	NM_000663,NM_015421	chr16,chr16	+,-	ABAT,TMEM186	4146,88881
chr11:73585841-73587030	chr11	+	73586049	73586923	True	NM_025155,NM_016565	chr11,chr11	+,-	PAAF1,CHCHD8	1109,1017
chr4:9675870-9677834	chr4	+	9676010	9677825	True	NR_031688,NM_000798	chr4,chr4	-,+	MIR548I2,DRD5	-118073,105432
chr8:67338963-67340487	chr8	+	67339120	67340501	True	NM_001080416,NM_015169,NM_144650	chr8,chr8,chr8	-,+,+	MYBL1,RRS1,ADHFE1	185029,761,4216
chr7:26332041-26332547	chr7	+	26332188	26332502	True	NM_031243,NM_013322,NM_001199835,NR_037670	chr7,chr7,chr7,chr7	-,+,+,+	HNRNPA2B1,SNX10,SNX10,SNX10	-91775,-734,-734,-734
chr6:44284178-44284564	chr6	+	44284191	44284613	True	NM_145026,NM_020745	chr6,chr6	+,-	SPATS1,AARS2	25783,-3128
chr3:183979683-183979909	chr3	+	183979824	183979920	True	NM_033259,NM_014693	chr3,chr3	-,+	CAMK2N2,ECE2	-573,-12430
chr7:102282277-102283160	chr7	+	102282633	102283040	True	NM_001114403,NM_001166339,NM_001031618	chr7,chr7,chr7	-,+,+	UPK3BL,SPDYE2L,SPDYE2	248,7731,7731
chr7:102282277-102283160	chr7	+	44029254	44029304	False	NM_175064,NR_003655	chr7,chr7	+,-	SPDYE1,POLR2J4	11184,29494
chr7:102282277-102283160	chr7	+	102183528	102183935	False	NM_001031618,NM_001166339,NM_001097615	chr7,chr7,chr7	+,+,-	SPDYE2,SPDYE2L,POLR2J3	7743,7743,29183
chr7:98802305-98802712	chr7	+	98802506	98802756	True	NM_001145715,NR_002147	chr7,chr7	-,+	KPNA7,MYH16	2385,68167
chrY:27199456-27201209	chrY	+	27199536	27201045	True	NM_004678,NM_001002760,NM_001002761,NM_001005786	chrY,chrY,chrY,chrY	-,-,-,+	BPY2,BPY2B,BPY2C,DAZ2	-1285,-1285,-1285,-219597
chrY:27199456-27201209	chrY	-	25127615	25129124	False	NM_004678,NM_001002760,NM_001002761,NM_004081	chrY,chrY,chrY,chrY	+,+,+,-	BPY2,BPY2B,BPY2C,DAZ1	1285,1285,1285,216165
chrY:27199456-27201209	chrY	-	26761356	26762865	False	NM_020364,NM_004678,NM_001002760,NM_001002761	chrY,chrY,chrY,chrY	-,+,+,+	DAZ3,BPY2,BPY2B,BPY2C	196824,1285,1285,1285
chr7:127258360-127259529	chr7	+	127258379	127259239	True	NM_006193,NM_020369	chr7,chr7	-,+	PAX4,FSCN3	-2599,-24741
chr7:99719926-99721011	chr7	+	99719978	99720552	True	NM_139315,NM_152755,NM_001190415,NR_033792,NM_203397,NM_005641	chr7,chr7,chr7,chr7,chr7,chr7	-,+,-,-,+,-	TAF6,CNPY4,TAF6,TAF6,MBLAC1,TAF6	-2957,-2764,-2497,-2983,3767,-2983
chr8:32466583-32466855	chr8	+	32466652	32466853	True	NM_032664,NM_001160001	chr8,chr8	-,+	FUT10,NRG1	863862,-13361
chr17:75178512-75178808	chr17	+	75178516	75178826	True	NM_001144001,NR_036200	chr17,chr17	+,-	SEC14L1,MIR4316	2468,214360
chr3:45429481-45429938	chr3	+	45429502	45429908	True	NM_015444,NM_015340	chr3,chr3	-,+	TMEM158,LARS2	-161688,166
chr1:104616277-104616511	chr1	+	104616326	104616400	True	NM_001008221,NR_033990	chr1,chr1	-,+	AMY1A,LOC100129138	-377253,-732
chr3:56696080-56697062	chr3	+	56696183	56696889	True	NR_024460,NM_015224	chr3,chr3	+,-	CCDC66,C3orf63	-105057,1247
chr10:112631022-112631568	chr10	+	112631024	112631352	True	NM_014456,NR_026932,NM_145341,NM_001199492	chr10,chr10,chr10,chr10	+,-,+,+	PDCD4,LOC282997,PDCD4,PDCD4	200,-362,200,200
chr1:32704995-32705212	chr1	+	32705040	32705248	True	NM_032648,NR_026850	chr1,chr1	+,-	FAM167B,MTMR9LP	7569,2113
chr10:115439394-115439597	chr10	+	115439399	115439513	True	NM_198060,NM_001227,NM_033340,NM_033339,NM_033338	chr10,chr10,chr10,chr10,chr10	-,+,+,+,+	NRAP,CASP7,CASP7,CASP7,CASP7	-15594,-24,-515,-24,-24
chr10:102502867-102503513	chr10	+	102502998	102503493	True	NM_003990,NM_005004,NM_003989,NM_003988,NM_003987,NM_000278	chr10,chr10,chr10,chr10,chr10,chr10	+,-,+,+,+,+	PAX2,NDUFB8,PAX2,PAX2,PAX2,PAX2	1974,-213362,1974,1974,1974,1974
chr7:72725150-72725546	chr7	+	72725188	72725546	True	NM_148956,NM_001168348,NM_018044,NM_001135211,NM_001168347	chr7,chr7,chr7,chr7,chr7	-,-,-,+,-	NSUN5,NSUN5,NSUN5,FKBP6,NSUN5	-2324,-2324,-2324,16608,-2324
chr7:72725150-72725546	chr7	-	75036872	75037054	False	NR_003614,NR_033322	chr7,chr7	-,+	PMS2L2,NSUN5P1	-48657,2569
chr7:72725150-72725546	chr7	+	72427850	72428032	False	NR_033323,NR_003602	chr7,chr7	-,+	NSUN5P2,LOC541473	-2548,12159
chr12:10824841-10825496	chr12	+	10824943	10825472	True	NM_005042,NM_018423	chr12,chr12	+,-	PRH2,STYK1	256361,1482
chr17:79266818-79267143	chr17	+	79266966	79267076	True	NM_001037984,NM_138570,NM_001086521	chr17,chr17,chr17	-,-,+	SLC38A10,SLC38A10,C17orf89	2070,2070,-53906
chr12:22049160-22049395	chr12	+	22049173	22049306	True	NM_018686,NM_020297	chr12,chr12	+,-	CMAS,ABCC9	149852,40379
chr16:84404842-84405253	chr16	+	84405133	84405225	True	NM_014861,NM_172347	chr16,chr16	+,-	ATP2C2,KCNG4	-3059,-131777
chr19:41386393-41386767	chr19	+	41386403	41386713	True	NM_030589,NR_001278,NM_000764	chr19,chr19,chr19	-,+,-	CYP2A7,CYP2B7P1,CYP2A7	1994,43456,1994
chr3:141497244-141497480	chr3	+	141497306	141497408	True	NM_001178140,NM_139209	chr3,chr3	-,+	TFDP2,GRK7	221871,-314
chr12:111018438-111018715	chr12	+	111018438	111018562	True	NM_139283,NM_001082537	chr12,chr12	-,+	PPTC7,TCTN1	2560,33269
chr3:15558960-15560241	chr3	+	15558997	15560222	True	NM_005677,NM_000060,NM_080539	chr3,chr3,chr3	-,+,-	COLQ,BTD,COLQ	3086,83032,3086
chr3:107092157-107092960	chr3	+	107092271	107092975	True	NR_028303,NM_032600	chr3,chr3	-,+	LOC100302640,CCDC54	-132786,3212
chr15:74532608-74533141	chr15	+	74532738	74532890	True	NM_001199040,NM_025055	chr15,chr15	-,+	STRA6,CCDC33	-30692,-4122
chr13:98830540-98832033	chr13	+	98830895	98831741	True	NM_178861,NR_036129	chr13,chr13	-,+	RNF113B,MIR3170	-1374,29036
chr10:101292903-101293235	chr10	+	101292919	101293255	True	NM_031212,NM_145285	chr10,chr10	-,+	SLC25A28,NKX2-3	87016,-280
chr3:128205559-128205792	chr3	+	128205701	128205781	True	NM_001145662,NM_001145661,NR_026954,NM_032638	chr3,chr3,chr3,chr3	-,-,+,-	GATA2,GATA2,LOC90246,GATA2	1033,1642,20896,6299
chrX:52239790-52241171	chrX	+	52239835	52241163	True	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,+,+,+,+,+,+,+,+,+,+	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	-931,-875,-875,-1084,-875,-875,-875,-931,-1084,-931,-1084,-1084,-1084,-931,-931
chrX:52239790-52241171	chrX	-	52258009	52259337	False	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,-,-,-,-,-,-,-,-,-,-	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	931,875,875,1084,875,875,875,931,1084,931,1084,1084,1084,931,931
chrX:52239790-52241171	chrX	+	52512786	52514114	False	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,+,+,+,+,+,+,+,+,+,+	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	-931,-875,-875,-1084,-875,-875,-875,-931,-1084,-931,-1084,-1084,-1084,-931,-931
chrX:52239790-52241171	chrX	-	52530949	52532277	False	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,-,-,-,-,-,-,-,-,-,-	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	931,875,875,1084,875,875,875,931,1084,931,1084,1084,1084,931,931
chrX:52239790-52241171	chrX	-	52543843	52545171	False	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,-,-,-,-,-,-,-,-,-,-	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	931,875,875,1084,875,875,875,931,1084,931,1084,1084,1084,931,931
chr6:25834888-25836349	chr6	+	25835272	25836350	True	NM_005074,NM_005495	chr6,chr6	-,+	SLC17A1,SLC17A4	-2985,-80409
chr12:25802425-25803069	chr12	+	25802495	25803098	True	NM_001164748,NM_001145727	chr12,chr12	+,-	RASSF8,IFLTD1	308865,-1007
chrX:47050459-47050901	chrX	+	47050586	47050804	True	NM_003334,NM_153280,NR_024235	chrX,chrX,chrX	+,+,-	UBA1,UBA1,NDUFB11	2396,-438,-45977
chr7:12724614-12726034	chr7	+	12724840	12725904	True	NM_001195396,NM_001037164,NM_001135924,NM_212460,NM_005738	chr7,chr7,chr7,chr7,chr7	+,+,-,+,+	ARL4A,ARL4A,VWDE,ARL4A,ARL4A	1006,547,-280988,547,1006
chr5:140625863-140626178	chr5	+	140625905	140626226	True	NM_018935,NR_001282,NM_031947	chr5,chr5,chr5	+,+,-	PCDHB15,PCDHB19P,SLC25A2	-809,-6267,57437
chr6:38607962-38608214	chr6	+	38608000	38608252	True	NM_052893,NM_001099272,NM_001371	chr6,chr6,chr6	-,-,+	BTBD9,BTBD9,DNAH8	-76,-76,82299
chr6:150690123-150690861	chr6	+	150690159	150690895	True	NM_001164695,NM_001164694,NM_203395,NM_024518	chr6,chr6,chr6,chr6	+,+,+,-	IYD,IYD,IYD,ULBP3	-182,-182,-182,-299957
chrX:49116391-49117077	chrX	+	49116481	49117057	True	NM_001114377,NM_033215,NM_001184745,NM_014009	chrX,chrX,chrX,chrX	-,+,+,-	FOXP3,PPP1R3F,PPP1R3F,FOXP3	4281,9248,9248,4281
chr8:144623879-144624277	chr8	+	144624036	144624260	True	NM_001166237,NM_015117	chr8,chr8	+,-	GSDMD,ZC3H3	11296,-416
chr19:3523899-3524310	chr19	+	3524035	3524323	True	NM_001136197,NM_001145165,NM_001136198	chr19,chr19,chr19	+,-,+	FZR1,DOHH,FZR1	-1134,-23097,-1134
chr15:100204927-100205908	chr15	+	100205005	100205525	True	NM_001130928,NM_152449	chr15,chr15	+,-	MEF2A,LYSMD4	-31880,68159
chr16:3184590-3184862	chr16	+	3184616	3184904	True	NM_004220,NR_024167,NM_001134655	chr16,chr16,chr16	+,-,+	ZNF213,MGC3771,ZNF213	152,-19017,229
chr6:30949054-30950280	chr6_mcf_hap5	+	2331349	2331422	False	NM_205854,NM_001010909	chr6_mcf_hap5,chr6_mcf_hap5	-,+	SFTA2,MUC21	-49458,2008
chr6:30949054-30950280	chr6_dbb_hap3	+	2243514	2243587	False	NM_205854,NM_001010909	chr6_dbb_hap3,chr6_dbb_hap3	-,+	SFTA2,MUC21	-49452,2008
chr6:30949054-30950280	chr6	+	30949403	30949476	True	NM_205854,NM_001010909	chr6,chr6	-,+	SFTA2,MUC21	-49451,2008
chr6:30949054-30950280	chr6_apd_hap1	+	2261042	2261115	False	NM_001010909,NM_005803	chr6_apd_hap1,chr6_apd_hap1	+,-	MUC21,FLOT1	2008,-251120
chr6:30949054-30950280	chr6_cox_hap2	+	2461303	2461376	False	NM_205854,NM_001010909	chr6_cox_hap2,chr6_cox_hap2	-,+	SFTA2,MUC21	-49428,2008
chr19:10380010-10380314	chr19	+	10380125	10380287	True	NM_000201,NM_004230	chr19,chr19	+,-	ICAM1,S1PR2	1229,-38177
chr5:52095814-52096022	chr5	+	52095813	52096055	True	NM_004531,NM_181501	chr5,chr5	-,+	MOCS2,ITGA1	309320,-11728
chr4:32079195-32080976	chr4	+	32079675	32081007	True	NM_015230,NM_032457	chr4,chr4	-,+	ARAP2,PCDH7	4165022,-1357696
chr22:31740977-31741282	chr22	+	31741097	31741239	True	NM_014323,NM_004147,NM_032051,NM_032050,NM_032052	chr22,chr22,chr22,chr22,chr22	-,+,-,-,-	PATZ1,DRG1,PATZ1,PATZ1,PATZ1	1060,54299,1060,1060,1060
chr12:22093958-22094175	chr12	+	22093974	22094153	True	NM_020298,NM_018686,NM_020297,NM_005691	chr12,chr12,chr12,chr12	-,+,-,-	ABCC9,CMAS,ABCC9,ABCC9	-4346,105005,-4346,-4346
chr17:4842458-4842861	chr17	+	4842635	4842851	True	NM_001165418,NM_005022,NM_001165417,NM_003562,NM_000173,NM_015528	chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,+,+	SLC25A11,PFN1,SLC25A11,SLC25A11,GP1BA,RNF167	661,9024,661,661,-7101,778
chr1:160160310-160160577	chr1	+	160160333	160160561	True	NM_001231,NR_028106	chr1,chr1	+,-	CASQ1,DCAF8	-99,71766
chr1:196635296-196635796	chr1	+	196635295	196635565	True	NM_198503,NM_000186	chr1,chr1	-,+	KCNT2,CFH	-57796,-14339
chr5:140619771-140620520	chr5	+	140619790	140620543	True	NM_018935,NR_001282,NR_001281,NM_031947	chr5,chr5,chr5,chr5	+,+,+,-	PCDHB15,PCDHB19P,PCDHB18,SLC25A2	4603,-152,-5903,63119
chr8:145692811-145693041	chr8	+	145692810	145693080	True	NM_032687,NM_138496,NM_145754,NM_003923,NM_001129888	chr8,chr8,chr8,chr8,chr8	-,-,+,-,-	CYHR1,CYHR1,KIFC2,FOXH1,CYHR1	-1961,-2392,-1123,8688,-1779
chr1:77748810-77749123	chr1	+	77748838	77749122	True	NM_174858,NM_012093,NM_005482	chr1,chr1,chr1	+,+,-	AK5,AK5,PIGK	-1227,-602,-63706
chr3:48283895-48285021	chr3	+	48283902	48285003	True	NM_016089,NM_201567	chr3,chr3	+,-	ZNF589,CDC25A	-1363,-54101
chr5:148206091-148206404	chr5	+	148206090	148206448	True	NM_000024,NM_000870	chr5,chr5	+,-	ADRB2,HTR4	15,-172351
chr11:45929104-45929916	chr11	+	45929115	45929943	True	NM_152312,NM_004813,NM_001080446,NM_057174	chr11,chr11,chr11,chr11	+,-,-,-	GYLTL1B,PEX16,C11orf94,PEX16	13252,9781,-282,9781
chr10:115938961-115939622	chr10	+	115939113	115939656	True	NR_031747,NM_198795,NM_018017	chr10,chr10,chr10	-,+,-	MIR2110,TDRD1,C10orf118	-5175,-135,-4749
chr1:205808961-205809236	chr1	+	205809066	205809262	True	NM_152491,NM_181644	chr1,chr1	-,+	PM20D1,MFSD4	10068,-271015
chr1:98382370-98383393	chr1	+	98382448	98383282	True	NM_000110,NM_001160301,NM_015976	chr1,chr1,chr1	-,-,+	DPYD,DPYD,SNX7	3385,3385,743953
chr12:88211122-88212945	chr12	+	88211346	88212993	True	NM_001009894,NR_033410	chr12,chr12	+,-	C12orf29,MKRN9P	216274,-32858
chr1:33817475-33819420	chr1	+	33817787	33819181	True	NM_004427,NM_152493	chr1,chr1	-,+	PHC2,ZNF362	-2288,-95664
chr6:24908380-24909723	chr6	+	24908569	24909667	True	NM_015895,NM_014722	chr6,chr6	+,-	GMNN,FAM65B	-133461,1578
chr6:33588300-33588723	chr6	+	33588311	33588616	True	NR_027908,NM_002224	chr6,chr6	-,+	C6orf227,ITPR3	-27196,539
chr17:27716626-27717111	chr17	+	27716626	27717045	True	NM_025142,NM_020791,NM_020772	chr17,chr17,chr17	+,+,-	TAOK1,TAOK1,NUFIP2	897,897,-95460
chr17:79819252-79820457	chr17	+	79819265	79820002	True	NM_000918,NM_001002244,NM_004309,NM_001185078,NM_001185077	chr17,chr17,chr17,chr17,chr17	-,+,-,-,-	P4HB,ANAPC11,ARHGDIA,ARHGDIA,ARHGDIA	-721,29596,9336,9336,8844
chr11:67798541-67799765	chr11	+	67798604	67799760	True	NM_030930,NM_006019,NM_002496	chr11,chr11,chr11	-,+,+	UNC93B1,TCIRG1,NDUFS8	-27011,6701,-571
chrX:15809938-15811820	chrX	+	15810620	15811671	True	NR_002725,NM_005089	chrX,chrX	-,+	INE2,ZRSR2	-4908,-2110
chr6:166077071-166077569	chr6	+	166077079	166077435	True	NM_001130690,NM_006661,NR_027284	chr6,chr6,chr6	-,-,+	PDE10A,PDE10A,LOC441177	-1495,-1495,323603
chr2:54090706-54090990	chr2	+	54090843	54091017	True	NM_001164165,NM_006794,NM_015701	chr2,chr2,chr2	-,-,+	GPR75-ASB3,GPR75,ERLEC1	-3673,-3673,-76826
chr16:2254226-2254746	chr16	+	2254538	2254783	True	NM_001199174,NM_001199175,NM_001199173,NM_182563,NM_022372,NM_020764	chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,-,+,-	MLST8,MLST8,MLST8,C16orf79,MLST8,CASKIN1	948,394,394,6336,394,-8073
chr4:187188068-187188434	chr4	+	187188084	187188448	True	NM_000128,NR_033900	chr4,chr4	+,-	F11,LOC285441	-1017,233814
chr19:7030097-7030561	chr19	+	7030096	7030595	True	NM_001164419,NM_001136507	chr19,chr19	-,+	MBD3L4,MBD3L5	9639,-2
chr19:7030097-7030561	chr19	-	7040182	7040681	False	NM_001164419,NM_144614,NM_001136507	chr19,chr19,chr19	-,+,+	MBD3L4,MBD3L2,MBD3L5	2,8669,-9639
chr19:7030097-7030561	chr19	-	7058643	7059142	False	NM_001164425,NM_144614	chr19,chr19	-,+	MBD3L3,MBD3L2	2,-9343
chr19:343159-343464	chr19	+	343306	343512	True	NM_017550,NM_130760	chr19,chr19	-,+	MIER2,MADCAM1	1329,152977
chr11:9630026-9631207	chr11	+	9630055	9631131	True	NR_036539,NM_001143976	chr11,chr11	-,+	LOC644656,WEE1	-147810,-33872
chr2:107122514-107123677	chr2	+	107122604	107123592	True	NM_001144013,NR_003506	chr2,chr2	-,+	RGPD3,PLGLA	-37803,-119889
chr2:107122514-107123677	chr2	-	87069359	87069841	False	NR_037931,NM_001178100	chr2,chr2	+,-	LOC100286979,CD8B	19106,19256
chr10:12238347-12239534	chr10	+	12238347	12238803	True	NM_014142,NM_006023	chr10,chr10	-,+	NUDT5,CDC123	-204,-437
chr22:25416072-25417123	chr22	+	25416208	25417044	True	NM_001001663,NM_001145206	chr22,chr22	-,+	TMEM211,KIAA1671	-80894,6896
chr1:155099364-155099722	chr1	+	155099399	155099771	True	NM_004428,NM_018973,NM_018845,NM_001122839,NM_001122837,NM_182685	chr1,chr1,chr1,chr1,chr1,chr1	+,-,+,+,+,+	EFNA1,DPM3,SLC50A1,SLC50A1,SLC50A1,EFNA1	577,13162,8516,8516,8516,577
chr12:85673896-85674285	chr12	+	85674014	85674334	True	NM_001100917,NM_006982	chr12,chr12	-,+	TSPAN19,ALX1	-243959,-29
chr2:27486635-27487279	chr2	+	27486694	27487272	True	NM_173650,NM_003459	chr2,chr2	+,-	DNAJC5G,SLC30A3	11016,-734
chr1:209884347-209886248	chr1	+	209884400	209885587	True	NM_005525,NM_000228	chr1,chr1	+,-	HSD11B1,LAMB3	-6260,-58580
chr1:68915366-68916784	chr1	+	68915448	68916804	True	NM_000329,NM_001924	chr1,chr1	-,+	RPE65,GADD45A	-133,-764643
chrX:70150774-70150993	chrX	+	70150816	70150936	True	NM_001048164,NM_032803,NM_001170931	chrX,chrX,chrX	-,-,+	SLC7A3,SLC7A3,FOXO4	89,89,165062
chr4:175750451-175750664	chr4	+	175750456	175750713	True	NM_001130703,NM_006529,NM_001042543	chr4,chr4,chr4	+,-,-	ADAM29,GLRA3,GLRA3	88795,9,9
chr12:54812530-54812774	chr12	+	54812633	54812817	True	NM_005337,NM_002205	chr12,chr12	+,-	NCKAP1L,ITGA5	78677,283
chr1:60393403-60394357	chr1	+	60393572	60394321	True	NM_000775,NM_015888	chr1,chr1	-,+	CYP2J2,HOOK1	-1149,-113097
chr10:15211844-15213812	chr10	+	15212040	15213453	True	NM_183005,NM_004808	chr10,chr10	+,-	RPP38,NMT2	-72909,-1345
chr19:1019197-1019416	chr19	+	1019196	1019462	True	NM_004368,NM_033420,NM_001033026,NM_201277	chr19,chr19,chr19,chr19	+,-,-,+	CNN2,C19orf6,C19orf6,CNN2	6835,1729,1729,6835
chr7:45066360-45066736	chr7	+	45066496	45066705	True	NR_003697,NM_001029835	chr7,chr7	-,+	C7orf40,CCM2	-40237,527
chr2:6997925-6998321	chr2	+	6998119	6998337	True	NM_207315,NM_080657	chr2,chr2	-,+	CMPK2,RSAD2	7657,19458
chrX:48816148-48817079	chrX	+	48816239	48816995	True	NM_001167992,NM_001136159,NM_001136158,NM_001136157,NM_017602	chrX,chrX,chrX,chrX,chrX	+,-,-,-,-	PQBP1,OTUD5,OTUD5,OTUD5,OTUD5	-60515,-591,-1346,-1346,-1346
chr2:232064991-232066088	chr2	+	232065004	232065981	True	NM_025139,NM_000867	chr2,chr2	+,-	ARMC9,HTR2B	-1720,-75180
chr22:42343045-42343583	chr22	+	42343081	42343339	True	NM_024053,NM_001002876,NR_024355,NM_001110215	chr22,chr22,chr22,chr22	-,-,+,-	CENPM,CENPM,LOC339674,CENPM	53,53,4851,-6858
chr7:143098507-143099785	chr7	+	143098589	143099788	True	NR_033897,NM_005232	chr7,chr7	+,-	LOC285965,EPHA1	5117,6247
chr14:55553816-55554846	chr14	+	55554165	55554640	True	NM_007086,NM_144578	chr14,chr14	-,+	WDHD1,MAPK1IP1L	-60346,-35867
chr2:102769766-102770510	chr2	+	102769774	102770556	True	NM_000877,NM_032718	chr2,chr2	+,-	IL1R1,MFSD9	17,582831
chr12:52757059-52757281	chr12	+	52757074	52757314	True	NM_002284,NM_002283	chr12,chr12	+,-	KRT86,KRT85	-61476,4045
chr5:159447484-159449073	chr5	+	159447601	159449096	True	NM_003314,NM_052927	chr5,chr5	+,-	TTC1,PWWP2A	-11473,97413
chr12:54671861-54672683	chr12	+	54672025	54672659	True	NM_002136,NM_012117,NM_031157,NR_002944	chr12,chr12,chr12,chr12	+,-,+,+	HNRNPA1,CBX5,HNRNPA1,HNRNPA1P10	1828,1315,1828,1873
chr1:43999306-43999536	chr1	+	43999327	43999537	True	NM_002840,NM_031207,NM_130440	chr1,chr1,chr1	+,-,+	PTPRF,HYI,PTPRF	-2831,-79667,-2831
chr19:56112300-56113518	chr19	+	56112369	56113322	True	NM_153219,NM_032836	chr19,chr19	+,-	ZNF524,FIZ1	-696,-1476
chr20:825153-825356	chr20	+	825236	825398	True	NM_031424,NM_207121,NM_015985	chr20,chr20,chr20	+,+,-	FAM110A,FAM110A,ANGPT4	-2,-8576,71612
chr9:140032124-140033457	chr9	+	140032548	140033326	True	NM_000832,NM_013379,NM_007327,NM_021569,NM_001185090,NM_001185091	chr9,chr9,chr9,chr9,chr9,chr9	+,-,+,+,+,+	GRIN1,DPP7,GRIN1,GRIN1,GRIN1,GRIN1	282,-23353,282,282,282,282
chr2:39893586-39893807	chr2	+	39893625	39893769	True	NM_152390,NM_001167959,NM_025264	chr2,chr2,chr2	+,+,-	TMEM178,TMEM178,THUMPD2	-641,-1038,112697
chr11:131780886-131781108	chr11	+	131780922	131781074	True	NM_014758,NM_016522,NM_001144059,NM_001144058	chr11,chr11,chr11,chr11	-,+,+,+	SNX19,NTM,NTM,NTM	-994540,-261,-261,-261
chr10:103896066-103896577	chr10	+	103896112	103896467	True	NM_001113407,NM_015062	chr10,chr10	-,+	LDB1,PPRC1	-15902,-3376
chr13:42534585-42534936	chr13	+	42534625	42534861	True	NM_015058,NM_001204504,NM_001009814	chr13,chr13,chr13	-,+,-	KIAA0564,DGKH,KIAA0564	410,79310,410
chr1:18957804-18958082	chr1	+	18958033	18958131	True	NM_001135254,NM_002584,NM_152232,NM_013945	chr1,chr1,chr1,chr1	+,+,-,+	PAX7,PAX7,TAS1R2,PAX7	-584,-584,228074,-584
chr19:37997491-37997789	chr19	+	37997550	37997762	True	NM_001013659,NM_152484	chr19,chr19	+,-	ZNF793,ZNF569	78,-39211
chr19:858294-858505	chr19	+	858358	858468	True	NM_001972,NM_001928,NM_005481	chr19,chr19,chr19	+,+,-	ELANE,CFD,MED16	-6118,1196,34800
chr3:120170509-120170855	chr3	+	120170637	120170901	True	NM_001168331,NM_007085	chr3,chr3	+,-	NDUFB4,FSTL1	144226,-719
chr1:113499413-113499653	chr1	+	113499434	113499680	True	NM_003051,NR_002796,NM_001166496	chr1,chr1,chr1	-,+,-	SLC16A1,AKR7A2P1,SLC16A1	-459,-33513,-749
chr8:132914060-132915799	chr8	+	132914137	132915846	True	NM_015137,NM_001080399	chr8,chr8	+,-	EFR3A,OC90	509,155832
chr1:146690259-146691507	chr1	+	146690326	146691390	True	NM_001144830,NM_001461,NM_004284,NM_001144829	chr1,chr1,chr1,chr1	-,-,+,-	FMO5,FMO5,CHD1L,FMO5	5890,5890,22900,5890
chr17:10103489-10103782	chr17	+	10103495	10103798	True	NM_201433,NM_004246	chr17,chr17	-,+	GAS7,GLP2R	-1627,-374165
chr1:173959510-173959801	chr1	+	173959556	173959704	True	NM_172071,NM_001122770	chr1,chr1	-,+	RC3H1,ZBTB37	2560,-122129
chr12:52754654-52755020	chr12	+	52754798	52754990	True	NM_002284,NM_002283	chr12,chr12	+,-	KRT86,KRT85	-59200,6369
chr17:65712956-65713367	chr17	+	65713103	65713389	True	NM_015462,NM_181655	chr17,chr17	+,-	NOL11,C17orf58	671,276436
chr6:6320708-6321050	chr6	+	6320724	6321072	True	NM_000129,NM_004271	chr6,chr6	-,+	F13A1,LY86	26,267861
chr2:21022969-21023450	chr2	+	21023027	21023371	True	NM_021925,NM_182828	chr2,chr2	-,+	C2orf43,GDF7	-200,-156663
chr2:191876927-191877733	chr2	+	191877181	191877702	True	NM_139266,NM_014905,NM_007315	chr2,chr2,chr2	-,+,-	STAT1,GLS,STAT1	1325,-131685,1325
chr6:90119799-90120087	chr6	+	90119801	90120124	True	NM_021244,NM_014942	chr6,chr6	-,+	RRAGD,ANKRD6	1921,22772
chr5:70375315-70376226	chr5	+	70375474	70376114	True	NM_022877,NM_001515	chr5,chr5	+,-	SMN2,GTF2H2	-154768,-11977
chr5:70375315-70376226	chr5	-	68843437	68844077	False	NR_027439,NM_001098728	chr5,chr5	-,+	LOC100272216,GTF2H2C	85012,11973
chr15:65871827-65873437	chr15	+	65871955	65873225	True	NM_030800,NM_004727	chr15,chr15	-,+	C15orf44,SLC24A1	30232,41044
chrX:47442773-47444143	chrX	+	47442899	47444181	True	NM_006950,NM_003254	chrX,chrX	-,+	SYN1,TIMP1	35125,-1260
chr1:24101796-24102798	chr1	+	24101942	24102726	True	NM_001127621,NM_020362	chr1,chr1	-,+	GALE,PITHD1	23396,2149
chr17:65374646-65374864	chr17	+	65374831	65374913	True	NM_181671,NM_012417,NM_174871	chr17,chr17,chr17	+,+,-	PITPNC1,PITPNC1,PSMD12	-958,-958,-12110
chr6:14868756-14869690	chr6	+	14868965	14869730	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	376796,793610
chr10:114208517-114208897	chr10	+	114208699	114208924	True	NM_022494,NM_145206	chr10,chr10	-,+	ZDHHC6,VTI1A	-2027,-2001
chr15:76348508-76349811	chr15	+	76348918	76349742	True	NM_152335,NM_138573	chr15,chr15	+,-	C15orf27,NRG4	2556,-44133
chr6:35479527-35479735	chr6	+	35479599	35479753	True	NM_003322,NM_007104	chr6,chr6	-,+	TULP1,RPL10A	944,-43472
chr8:54165045-54166176	chr8	+	54165341	54166117	True	NM_000912,NM_005285	chr8,chr8	-,+	OPRK1,NPBWR1	-1147,-312924
chr3:52015823-52016894	chr3	+	52016312	52016874	True	NM_001198898,NM_001198896,NM_000666,NM_001198895,NM_001146314,NR_027476,NM_015407,NM_001198897,NR_037192,NM_032750	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,-,-,+,+,+,-	ACY1,ACY1,ACY1,ACY1,ABHD14B,ABHD14B,ABHD14A,ACY1,ABHD14A-ACY1,ABHD14B	425,425,425,425,-7666,-7666,-7331,425,-7331,-7666
chr6:4894240-4894842	chr6	+	4894239	4894840	True	NM_001143971,NM_006638	chr6,chr6	+,-	CDYL,RPP40	-4066,109493
chrX:37265066-37265972	chrX	+	37265072	37265767	True	NM_001173490,NM_006520	chrX,chrX	+,-	PRRG1,DYNLT3	-56540,441184
chr8:12220034-12220373	chr8	+	12220340	12220414	True	NR_024044,NR_026789	chr8,chr8	-,+	DEFB109P1,FAM66A	37510,-863
chr8:12220034-12220373	chr8	+	11974094	11974152	False	NR_003275,NR_027425	chr8,chr8	-,+	LOC392196,FAM66D	12702,-854
chr8:12220034-12220373	chr8	-	7212014	7212072	False	NR_027423,NM_001164457,NR_003668	chr8,chr8,chr8	-,-,+	FAM66B,ZNF705G,DEFB109P1B	854,8468,-41697
chr8:12220034-12220373	chr8	+	7813340	7813398	False	NR_003668,NR_027424	chr8,chr8	-,+	DEFB109P1B,FAM66E	41695,-856
chr8:95730852-95731365	chr8	+	95731143	95731411	True	NM_181787,NR_034034	chr8,chr8	+,-	DPY19L4,LOC100288748	691,-79448
chr4:103259502-103260693	chr4	+	103259676	103260708	True	NM_001165412,NM_022154,NM_001135147,NM_001135146	chr4,chr4,chr4,chr4	+,-,-,-	NFKB1,SLC39A8,SLC39A8,SLC39A8	161777,5690,5752,5997
chrX:70941360-70941818	chrX	+	70941373	70941829	True	NR_001568,NR_034005,NM_001145140,NM_001145139	chrX,chrX,chrX,chrX	-,+,-,-	BCYRN1,FLJ46446,CXorf49,CXorf49B	7183,-24378,-3238,-3238
chrX:70941360-70941818	chrX	-	70979445	70979901	False	NR_001568,NM_001145140,NM_001145139	chrX,chrX,chrX	-,+,+	BCYRN1,CXorf49,CXorf49B	-30483,3238,3238
chr3:152881215-152881524	chr3	+	152881232	152881551	True	NM_002886,NM_001123228	chr3,chr3	+,-	RAP2B,TMEM14E	-1254,-822453
chr15:74373336-74374142	chr15	+	74373353	74374023	True	NM_001130136,NM_001038640	chr15,chr15	+,-	ISLR2,GOLGA6A	47691,918
chr15:74373336-74374142	chr15	+	78218290	78218340	False	NM_001101404,NR_027024	chr15,chr15	+,-	SH2D7,LOC645752	166586,898
chr15:74373336-74374142	chr15	-	72947905	72948575	False	NR_002780,NM_018652	chr15,chr15	-,+	HIGD2B,GOLGA6B	29972,-918
chr15:74373336-74374142	chr15	-	75576043	75576713	False	NR_030360,NM_001145224	chr15,chr15	-,+	MIR631,GOLGA6D	69370,-912
chr15:74373336-74374142	chr15	-	75551766	75552436	False	NR_030360,NM_001164404	chr15,chr15	-,+	MIR631,GOLGA6C	93647,-918
chr20:37053746-37055507	chr20	+	37053817	37055235	True	NR_015366,NR_002910,NR_002911,NR_003239,NR_003017,NR_027241,NR_003018	chr20,chr20,chr20,chr20,chr20,chr20,chr20	-,-,-,+,-,-,-	LOC388796,SNORA71B,SNORA71A,SNHG11,SNORA71C,LOC388796,SNORA71D	8777,21,901,20061,3262,8833,7457
chr5:138738701-138739501	chr5	+	138738714	138739440	True	NM_001033112,NM_194296,NM_001161546	chr5,chr5,chr5	+,-,-	PAIP2,SPATA24,LOC389333	-60631,386,-7829
chr6:26235048-26235460	chr6	+	26235051	26235449	True	NM_003532,NM_005320,NM_003540	chr6,chr6,chr6	+,-,+	HIST1H3E,HIST1H1D,HIST1H4F	-9719,-17,5204
chr11:118018542-118018877	chr11	+	118018611	118018849	True	NR_024527,NM_001142349,NM_001142348,NM_019894,NM_174934	chr11,chr11,chr11,chr11,chr11	-,-,-,+,-	SCN4B,SCN4B,SCN4B,TMPRSS4,SCN4B	-2427,-2427,4831,-70935,4831
chr8:134204033-134205069	chr8	+	134204054	134204928	True	NR_037944,NM_003882,NM_001045557,NM_001204870,NM_080838,NM_001204869	chr8,chr8,chr8,chr8,chr8,chr8	+,+,-,+,+,+	WISP1,WISP1,SLA,WISP1,WISP1,WISP1	-823,-823,-88744,-823,-823,-823
chr19:1001616-1001869	chr19	+	1001849	1001911	True	NM_138690,NM_001033026	chr19,chr19	+,-	GRIN3B,C19orf6	-1463,19280
chr15:81272593-81273458	chr15	+	81272718	81272924	True	NM_022566,NM_015154	chr15,chr15	+,-	MESDC1,MESDC2	20370,9337
chr12:131005919-131006917	chr12	+	131006059	131006703	True	NM_004764,NM_015347	chr12,chr12	+,-	PIWIL1,RIMBP2	-183677,-3649
chr12:27234911-27235803	chr12	+	27234927	27235535	True	NM_001080406,NM_004264	chr12,chr12	-,+	C12orf71,MED21	-24,-59495
chr12:110720012-110720413	chr12	+	110720042	110720433	True	NM_001135765,NM_170665,NM_001681,NM_016238	chr12,chr12,chr12,chr12	+,+,+,-	ATP2A2,ATP2A2,ATP2A2,ANAPC7	-1061,-1061,-1061,121160
chr8:29957462-29958056	chr8	+	29957461	29957780	True	NM_001128208,NM_016127,NM_015344	chr8,chr8,chr8	+,-,+	LEPROTL1,TMEM66,LEPROTL1	-4594,-16812,-4594
chr10:11651186-11653059	chr10	+	11651504	11653057	True	NM_014688,NM_024693	chr10,chr10	-,+	USP6NL,ECHDC3	672,131298
chr20:26038731-26039486	chr20	+	26038742	26039258	True	NR_003678,NR_026713	chr20,chr20	-,+	C20orf191,FAM182A	55469,-3546
chr20:26038731-26039486	chr20	-	25777918	25778434	False	NR_004846,NR_027061,NR_026714	chr20,chr20,chr20	+,-,-	LOC100134868,FAM182B,FAM182B	212000,-1040,3546
chr7:128002599-128003717	chr7	+	128002944	128003666	True	NM_001114726,NM_001098786,NM_001174164	chr7,chr7,chr7	-,+,-	PRRT4,C7orf68,PRRT4	-1205,92217,-1205
chr16:2022522-2023162	chr16	+	2022711	2023155	True	NR_003142,NM_174903,NM_144603,NM_002952,NM_172167,NR_002326,NM_006453,NM_172168,NR_003020	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,-,-,-,-,+,-,+	SNHG9,RNF151,NOXO1,RPS2,NOXO1,SNORA64,TBL3,NOXO1,SNORA78	-7765,-5887,8335,-7884,8079,-9604,-698,8079,-7577
chr14:64939915-64940816	chr14	+	64939988	64940854	True	NM_006977,NM_004857	chr14,chr14	-,+	ZBTB25,AKAP5	29750,-7836
chr14:66168985-66169756	chr14	+	66169118	66169445	True	NM_178157,NR_024334	chr14,chr14	+,-	FUT8,LOC645431	-33046,-289783
chr8:19522940-19524204	chr8	+	19522970	19523771	True	NM_018371,NM_018142	chr8,chr8	-,+	CSGALNACT1,INTS10	16380,151146
chr1:13188232-13189659	chr1	+	13188411	13189359	True	NM_001100631,NM_001136561	chr1,chr1	+,-	PRAMEF22,LOC440563	-152926,-4085
chr1:67897116-67899049	chr1	+	67897159	67898659	True	NM_001018068,NM_001018069,NM_001559,NM_015640,NM_001018067	chr1,chr1,chr1,chr1,chr1	-,-,+,-,-	SERBP1,SERBP1,IL12RB2,SERBP1,SERBP1	-1036,-1036,-124174,-1036,-1036
chr1:201799267-201800868	chr1	+	201799346	201800894	True	NM_012134,NM_018085	chr1,chr1	-,+	LMOD1,IPO9	114872,-1110
chr6:116782475-116782998	chr6	+	116782487	116782915	True	NM_001010919,NM_001139444	chr6,chr6	+,-	FAM26F,BET3L	18,83908
chr10:103999631-104000364	chr10	+	103999637	104000397	True	NM_001199378,NM_001199379,NM_005029,NM_004193	chr10,chr10,chr10,chr10	+,+,-,+	GBF1,GBF1,PITX3,GBF1	4857,4857,884,4857
chr7:2594034-2594337	chr7	+	2594076	2594378	True	NM_001100390,NM_152558,NM_152743	chr7,chr7,chr7	+,+,-	IQCE,IQCE,BRAT1	4253,4253,1064
chr15:43398370-43398579	chr15	+	43398418	43398504	True	NM_024956,NM_174916	chr15,chr15	+,-	TMEM62,UBR1	27217,-132
chr9:99483207-99483764	chr9	+	99483211	99483657	True	NM_014930,NR_026792	chr9,chr9	-,+	ZNF510,LOC441455	56721,4445
chr16:67538386-67539171	chr16	+	67538435	67538954	True	NM_001138,NM_024519	chr16,chr16	-,+	AGRP,FAM65A	-20719,23762
chr17:15902159-15902514	chr17	+	15902358	15902512	True	NM_001042698,NR_037985,NM_017775,NM_001042697	chr17,chr17,chr17,chr17	-,+,+,-	ZSWIM7,TTC19,TTC19,ZSWIM7	544,181,181,544
chrX:53348344-53348941	chrX	+	53348464	53348974	True	NM_001111125,NM_144968	chrX,chrX	-,+	IQSEC2,RIBC1	1598,100864
chr21:47273785-47275223	chr21	+	47273832	47274875	True	NM_006657,NM_020528,NM_001130141	chr21,chr21,chr21	-,+,+	FTCD,PCBP3,PCBP3	300656,-4008,-4008
chrX:102941872-102942884	chrX	+	102941905	102942931	True	NM_001142419,NM_001142418,NM_012286,NM_001142432,NM_001142421,NM_001142431,NM_001142420,NM_001142430,NM_001142422,NM_001142423,NM_001142424,NM_001142425,NM_001142426,NM_001142427,NM_001142428,NM_001142429,NM_182541	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,+	MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,TMEM31	205,-159,-159,205,205,205,205,-159,205,-159,-159,-159,-159,205,205,-159,22905
chr9:134378034-134378234	chr9	+	134378039	134378188	True	NM_001136114,NM_001136113,NM_001135954,NM_007171,NM_001077365,NM_001077366	chr9,chr9,chr9,chr9,chr9,chr9	+,+,-,+,+,+	POMT1,POMT1,UCK1,POMT1,POMT1,POMT1	100,100,28525,100,100,100
chr15:75136231-75138213	chr15	+	75136291	75138194	True	NM_001030005,NM_001099436	chr15,chr15	+,-	CPLX3,ULK3	-17391,-739
chr5:76324925-76326238	chr5	+	76324995	76326210	True	NM_018046,NR_003014	chr5,chr5	+,-	AGGF1,SNORA47	-1,50236
chr1:16539811-16540882	chr1	+	16539864	16540164	True	NM_153213,NM_001114600	chr1,chr1	-,+	ARHGEF19,C1orf144	-760,153418
chr10:8925600-8927029	chr10	+	8925811	8927030	True	NM_002051,NR_024256	chr10,chr10	+,-	GATA3,FLJ45983	-829195,-830364
chr19:1132467-1132859	chr19	+	1132517	1132649	True	NM_001100122,NM_001039848	chr19,chr19	-,+	SBNO2,GPX4	-244,-27919
chr11:63438876-63439099	chr11	+	63438945	63439117	True	NM_201428,NM_201429,NM_006054,NM_201430,NM_015459	chr11,chr11,chr11,chr11,chr11	+,+,+,+,-	RTN3,RTN3,RTN3,RTN3,ATL3	9804,9804,9804,9804,16
chr3:47839898-47840231	chr3	+	47840047	47840223	True	NM_003074,NM_014966,NM_138615	chr3,chr3,chr3	-,+,+	SMARCC1,DHX30,DHX30	-16642,4175,4175
chr10:2009085-2010277	chr10	+	2009166	2010308	True	NR_033387,NM_018702	chr10,chr10	+,-	NCRNA00168,ADARB2	-440392,-229448
chr8:79658484-79660149	chr8	+	79658550	79660196	True	NM_000880,NM_016010	chr8,chr8	-,+	IL7,FAM164A	57620,-80319
chrY:1661302-1661556	chrY	+	1661465	1661605	True	NM_005088,NR_027383,NM_004043,NM_178129	chrY,chrY,chrY,chrY	+,+,+,-	AKAP17A,AKAP17A,ASMT,P2RY8	-1030,-1030,2742,-55428
chrY:1661302-1661556	chrX	+	1711465	1711605	False	NM_005088,NR_027383,NM_004043,NM_178129	chrX,chrX,chrX,chrX	+,+,+,-	AKAP17A,AKAP17A,ASMT,P2RY8	-1030,-1030,2742,-55428
chr19:39423084-39423904	chr19	+	39423104	39423814	True	NM_017827,NM_001145901,NM_021107,NM_033362,NM_033363	chr19,chr19,chr19,chr19,chr19	-,-,+,+,+	SARS2,SARS2,MRPS12,MRPS12,MRPS12	-1568,-1568,-1561,-1807,-1561
chr1:167073078-167074535	chr1	+	167073581	167074544	True	NM_005814,NM_001080426	chr1,chr1	-,+	GPA33,DUSP27	-13713,-9545
chr14:21160627-21161097	chr14	+	21160710	21160951	True	NM_001097577,NM_002937,NM_001145,NM_194431,NM_001001968	chr14,chr14,chr14,chr14,chr14	+,+,+,+,-	ANG,RNASE4,ANG,RNASE4,OR6S1	-3829,-8389,-8425,-3829,-50860
chr6:166724666-166725424	chr6	+	166724847	166725064	True	NM_175922,NR_027284	chr6,chr6	-,+	PRR18,LOC441177	-2976,-323870
chr6:134670166-134671483	chr6	+	134670458	134671423	True	NM_004865,NM_001143676	chr6,chr6	+,-	TBPL1,SGK1	-396208,-31262
chr15:90776085-90776334	chr15	+	90776190	90776379	True	NM_001013657,NM_006384	chr15,chr15	+,-	C15orf58,CIB1	1107,951
chr2:85827578-85828120	chr2	+	85827650	85828088	True	NR_033179,NM_016494,NM_001031738	chr2,chr2,chr2	-,+,-	TMEM150A,RNF181,TMEM150A	1784,-4864,1784
chr19:49655642-49655917	chr19	+	49655649	49655771	True	NM_001195227,NM_017636,NM_002152	chr19,chr19,chr19	+,+,-	TRPM4,TRPM4,HRC	5244,5244,2960
chr17:79982135-79982405	chr17	+	79982177	79982421	True	NM_005052,NM_144998,NM_144999	chr17,chr17,chr17	+,-,+	RAC3,STRA13,LRRC45	7110,-1404,-948
chrX:48397868-48398089	chrX	+	48397916	48398032	True	NM_033518,NM_002536	chrX,chrX	-,+	SLC38A5,TBC1D25	-69272,42
chr16:58057992-58058455	chr16	+	58058263	58058487	True	NM_020807,NM_002428	chr16,chr16	-,+	ZNF319,MMP15	-24501,794
chr2:197417594-197418782	chr2	+	197417623	197418591	True	NM_020760,NM_001080539	chr2,chr2	-,+	HECW2,CCDC150	38806,85764
chr11:43910668-43912336	chr11	+	43911004	43912141	True	NR_026952,NM_021926,NM_139178	chr11,chr11,chr11	+,-,+	LOC729799,ALX4,ALKBH3	6711,419638,-8708
chr9:129677955-129678674	chr9	+	129678071	129678549	True	NM_001190729,NM_001190730,NM_012098,NM_014636	chr9,chr9,chr9,chr9	+,+,-,+	RALGPS1,RALGPS1,ANGPTL2,RALGPS1	-1076,-1076,206545,-1076
chr17:80607213-80607521	chr17	+	80607346	80607570	True	NM_019613,NM_024619	chr17,chr17	-,+	WDR45L,FN3KRP	-935,67011
chr10:126629684-126630013	chr10	+	126629683	126629909	True	NM_022802,NM_017580	chr10,chr10	-,+	CTBP2,ZRANB1	86601,782
chr4:48129793-48130073	chr4	+	48129801	48130121	True	NM_003328,NM_207330	chr4,chr4	-,+	TXK,NIPAL1	6202,-111061
chr19:46730087-46731328	chr19	+	46730101	46731197	True	NM_198541,NM_207393	chr19,chr19	+,-	IGFL1,IGFL3	1811,-102170
chr15:96874749-96875040	chr15	+	96874824	96874980	True	NR_031715,NM_001145156,NM_001145155,NM_001145157,NR_034095,NM_021005	chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,-,+	MIR1469,NR2F2,NR2F2,NR2F2,LOC400456,NR2F2	1509,813,-5718,1588,-1004495,-764
chr9:137216073-137216661	chr9	+	137216119	137216575	True	NM_002957,NR_023344	chr9,chr9	+,-	RXRA,RNU6ATAC	1740,-186433
chr19:19304914-19305338	chr19	+	19304916	19305034	True	NM_176880,NM_001145784,NM_005919,NM_003721,NM_001145783,NM_134440,NR_027307,NR_027308	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,+,-,+,-,-	NR2C2AP,LOC729991,LOC729991-MEF2B,RFXANK,LOC729991,RFXANK,LOC729991-MEF2B,LOC729991-MEF2B	9254,-1516,-1516,-1959,-1516,-1959,-1516,-1516
chr5:270629-270917	chr5	+	270762	270827	True	NM_145265,NM_013232	chr5,chr5	-,+	CCDC127,PDCD6	-52465,908
chr3:171759988-171760248	chr3	+	171760013	171760227	True	NM_001135095,NM_002662,NM_022763	chr3,chr3,chr3	+,-,+	FNDC3B,PLD1,FNDC3B	-1721,-231740,-2647
chr3:112359646-112360752	chr3	+	112359913	112360793	True	NM_017945,NM_199511,NM_199512	chr3,chr3,chr3	+,-,-	SLC35A5,CCDC80,CCDC80	-79069,-38,-38
chrY:10021913-10022285	chrY	+	10021944	10022038	True	NR_003593,NR_003589	chrY,chrY	+,-	TTTY23B,TTTY1B	-273589,-410016
chr10:52024679-52025531	chr10	+	52024708	52025560	True	NM_019893,NM_018232	chr10,chr10	-,+	ASAH2,FAM21B	-16338,-186875
chr2:128076899-128077337	chr2	+	128076930	128077094	True	NM_000312,NM_006609	chr2,chr2	+,-	PROC,MAP3K2	98901,23726
chrX:148793362-148793704	chrX	+	148793427	148793753	True	NM_032508,NM_005366	chrX,chrX	-,+	TMEM185A,MAGEA11	-79940,-16
chr1:241782658-241783152	chr1	+	241782678	241783170	True	NM_144625,NM_001821	chr1,chr1	+,-	WDR64,CHML	32409,16112
chr3:135747354-135747853	chr3	+	135747353	135747671	True	NM_181897,NM_001145417	chr3,chr3	+,-	PPP2R3A,MSL2	-5827,165697
chr1:66257551-66257931	chr1	+	66257555	66257853	True	NM_002600,NM_001037341,NR_029516	chr1,chr1,chr1	+,+,-	PDE4B,PDE4B,MIR101-1	1002,339,-733364
chr6:150244439-150244930	chr6	+	150244510	150244750	True	NM_025217,NM_001001788	chr6,chr6	+,-	ULBP2,RAET1G	18385,-296
chr2:128098858-128099401	chr2	+	128098989	128099447	True	NM_000312,NM_006609	chr2,chr2	+,-	PROC,MAP3K2	76548,1373
chr2:290058-290334	chr2	+	290072	290342	True	NR_024080,NM_001002919	chr2,chr2	+,-	ACP1,FAM150B	-25254,-1764
chr6:168474897-168476049	chr6	+	168474914	168475992	True	NM_030615,NM_001122841,NM_024919	chr6,chr6,chr6	+,-,-	KIF25,FRMD1,FRMD1	-56412,590,3897
chr9:65636282-65636734	chr9	+	65636300	65636497	True	NR_024496,NM_015667	chr9,chr9	+,-	LOC442421,FAM75A7	857771,-126690
chr9:65636282-65636734	chr9	+	40311780	40311977	False	NM_001083124,NM_033160	chr9,chr9	+,-	FAM75A3,ZNF658	388313,480192
chr9:65636282-65636734	chr9	+	43894725	43894922	False	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	-263995,-209891
chr10:32474695-32475531	chr10	+	32474924	32475502	True	NM_004521,NM_001026383	chr10,chr10	-,+	KIF5B,CCDC7	-129553,259538
chr1:18808016-18808323	chr1	+	18808114	18808372	True	NM_152375,NM_152232	chr1,chr1	+,-	KLHDC7A,TAS1R2	-741,377833
chr6:26110059-26110541	chr6	+	26110059	26110221	True	NM_003542,NM_005323	chr6,chr6	+,-	HIST1H4C,HIST1H1T	-5940,-1695
chr1:44680077-44680483	chr1	+	44680082	44680512	True	NM_019100,NM_001034023,NM_001034024,NM_024066	chr1,chr1,chr1,chr1	+,+,+,-	DMAP1,DMAP1,DMAP1,ERI3	-1008,-1008,-1008,140477
chr8:144451740-144451959	chr8	+	144451767	144451953	True	NR_026785,NM_052924	chr8,chr8	-,+	C8orf51,RHPN1	-962,-793
chr11:47273052-47273903	chr11	+	47273178	47273747	True	NM_001130102,NM_001610,NM_001130101,NM_005693,NM_001131064	chr11,chr11,chr11,chr11,chr11	+,-,+,+,-	NR1H3,ACP2,NR1H3,NR1H3,ACP2	-2781,-2721,5749,5749,-2721
chr2:237174005-237175681	chr2	+	237174180	237175644	True	NM_020311,NM_212556	chr2,chr2	+,-	CXCR7,ASB18	302735,-1192
chr10:98339900-98340181	chr10	+	98339936	98340002	True	NM_020123,NM_001170765	chr10,chr10	-,+	TM9SF3,LCOR	6857,252014
chr14:21859744-21861201	chr14	+	21860024	21861075	True	NR_002916,NM_014828,NR_003029,NM_007192	chr14,chr14,chr14,chr14	-,+,-,-	SNORD8,TOX4,SNORD9,SUPT16H	4542,84259,61,-7599
chr22:35778809-35779463	chr22	+	35778948	35779512	True	NM_005368,NM_002133	chr22,chr22	-,+	MB,HMOX1	233922,-1939
chr3:194030138-194030704	chr3	+	194030148	194030588	True	NR_024480,NM_005524	chr3,chr3	-,+	LOC100131551,HES1	55,-176268
chr11:61558893-61559339	chr11	+	61559047	61559384	True	NR_030342,NM_014206,NM_004111	chr11,chr11,chr11	-,-,+	MIR611,C11orf10,FEN1	706,758,765
chr17:58597653-58598167	chr17	+	58597966	58598041	True	NM_006380,NM_003620	chr17,chr17	-,+	APPBP2,PPM1D	5594,79502
chr10:49810604-49812588	chr10	+	49810794	49812136	True	NM_020945,NM_021226	chr10,chr10	+,-	WDFY4,ARHGAP22	81381,1052
chr1:6663705-6664067	chr1	+	6663732	6663912	True	NM_014851,NM_153812	chr1,chr1	-,+	KLHL21,PHF13	-803,9843
chr1:45306764-45308242	chr1	+	45306918	45307792	True	NM_003738,NM_001166292,NM_001136537	chr1,chr1,chr1	-,-,+	PTCH2,PTCH2,BTBD19	874,874,-32815
chr16:19895262-19895539	chr16	+	19895316	19895380	True	NM_153208,NM_016235	chr16,chr16	+,-	IQCK,GPRC5B	-167589,821
chr17:41439719-41439992	chr17	+	41439730	41439877	True	NR_027412,NM_001661	chr17,chr17	-,+	LOC100130581,ARL4D	26444,36475
chr19:57350079-57350370	chr19	+	57350098	57350402	True	NM_006210,NM_001146187,NM_001146326,NM_001146185,NM_001146184,NM_001146327,NR_024059,NM_015363	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,+,-	PEG3,PEG3,ZIM2,PEG3,PEG3,ZIM2,MIMT1,ZIM2	1742,1742,1745,1742,1742,1745,1867,1745
chr13:99854249-99854547	chr13	+	99854343	99854580	True	NM_001144072,NR_026644,NR_036531,NM_177967,NR_036532	chr13,chr13,chr13,chr13,chr13	+,+,-,+,-	UBAC2,UBAC2,LOC100289373,UBAC2,LOC100289373	-1729,-1245,-1332,-1245,-1334
chr17:28884064-28884926	chr17	+	28884198	28884970	True	NM_206832,NM_015594	chr17,chr17	-,+	TMIGD1,TBC1D29	-223133,1613
chr8:96148899-96149990	chr8	+	96149185	96149995	True	NR_037484,NM_024613	chr8,chr8	-,+	MIR3150B,PLEKHF2	-63961,-3288
chr22:17694576-17694851	chr22	+	17694583	17694655	True	NM_017424,NR_024483	chr22,chr22	-,+	CECR1,CECR4	-3804,-54355
chr1:48460220-48460710	chr1	+	48460370	48460726	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	1886,227630
chr15:31285885-31286279	chr15	+	31286067	31286329	True	NM_017762,NM_014967	chr15,chr15	-,+	MTMR10,FAN1	-2260,-90055
chr9:140141816-140142100	chr9	+	140141826	140142148	True	NM_001004353,NM_006088,NM_001001710,NM_015456	chr9,chr9,chr9,chr9	+,+,-,+	C9orf173,TUBB2C,FAM166A,COBRA1	3581,-6166,124,7610
chr1:12820842-12821205	chr1	+	12820939	12821151	True	NM_001146344,NM_001080830	chr1,chr1	-,+	PRAMEF11,PRAMEF12	70163,13832
chr4:121993226-121993439	chr4	+	121993229	121993361	True	NM_024574,NR_024365	chr4,chr4	-,+	C4orf31,LOC100192379	362,692378
chr19:7692953-7693273	chr19	+	7693096	7693312	True	NM_006949,NR_033242,NM_020196,NM_174895,NM_001127396,NM_001171155	chr19,chr19,chr19,chr19,chr19,chr19	+,+,-,-,+,+	STXBP2,LOC100131801,XAB2,PCP2,STXBP2,LOC100131801	8678,1358,1177,5308,8678,1358
chr16:30076127-30076334	chr16	+	30076244	30076382	True	NM_004608,NM_184041,NM_001127617,NM_184043	chr16,chr16,chr16,chr16	-,+,+,+	TBX6,ALDOA,ALDOA,ALDOA	26873,661,-322,-695
chr3:45186657-45186981	chr3	+	45186700	45186901	True	NM_022842,NM_178181,NM_003278	chr3,chr3,chr3	-,-,+	CDCP1,CDCP1,CLEC3B	1064,1064,-118993
chr11:2920733-2921310	chr11	+	2920864	2921348	True	NM_183233,NM_007105,NM_002555	chr11,chr11,chr11	+,-,+	SLC22A18,SLC22A18AS,SLC22A18	36,3877,2163
chrX:109763705-109764119	chr3	+	46619063	46619122	True	NM_003212,NM_024512,NM_001174136	chr3,chr3,chr3	+,-,+	TDGF1,LRRC2,TDGF1	-47,-11052,-3078
chr12:65571919-65573883	chr12	+	65572006	65573181	True	NM_001167614,NM_007191,NM_014319	chr12,chr12,chr12	+,-,+	LEMD3,WIF1,LEMD3	-8719,-56660,-8719
chr3:171526705-171527616	chr3	+	171526949	171527585	True	NM_001130081,NM_002662,NM_001164436	chr3,chr3,chr3	-,-,+	PLD1,PLD1,TMEM212	738,738,33553
chr5:752814-753457	chr5	+	752840	753436	True	NM_001166260,NM_007030	chr5,chr5	+,-	TRIP13,TPPP	139532,-59330
chr5:752814-753457	chr5	+	845295	845875	False	NM_001166260,NM_024786	chr5,chr5	+,-	TRIP13,ZDHHC11	47093,5276
chr12:109127038-109127530	chr12	+	109127283	109127381	True	NM_001917,NM_014325	chr12,chr12	+,-	DAO,CORO1C	146475,-1988
chr14:35451280-35451818	chr14	+	35451390	35451666	True	NM_182648,NM_003136,NM_001146282	chr14,chr14,chr14	-,+,+	BAZ1A,SRP54,SRP54	-106537,437,437
chr20:57427554-57427856	chr20	+	57427681	57427791	True	NM_001077490,NM_080425,NR_002785	chr20,chr20,chr20	+,+,-	GNAS,GNAS,GNAS-AS1	244,244,-1723
chr12:57867904-57869214	chr12	+	57867914	57869150	True	NM_032496,NM_004990,NM_001080157,NM_001080156	chr12,chr12,chr12,chr12	-,+,-,-	ARHGAP9,MARS,ARHGAP9,ARHGAP9	4533,12585,4324,2628
chr15:71445489-71445990	chr15	+	71445573	71445984	True	NM_024817,NM_001102658	chr15,chr15	+,-	THSD4,CT62	-11836,-37734
chr5:160232765-160233210	chr5	+	160232852	160233254	True	NR_029701,NM_025153	chr5,chr5	+,-	MIR146A,ATP10B	-320545,46025
chr3:195308987-195309331	chr3	+	195309093	195309302	True	NM_001647,NR_003265	chr3,chr3	-,+	APOD,SDHAP2	1835,75607
chrY:24453797-24454078	chrY	+	24453969	24454051	True	NR_001541,NR_002193,NM_152585	chrY,chrY,chrY	-,+,+	TTTY5,RBMY2FP,RBMY1F	-8946,954,958
chr1:41952800-41953974	chr1	+	41952803	41953861	True	NM_001956,NR_037868	chr1,chr1	-,+	EDN2,LOC100507178	-2459,-472592
chr17:56272111-56272326	chr17	+	56272110	56272190	True	NM_000502,NM_017777	chr17,chr17	+,-	EPX,MKS1	-2072,24526
chr3:46605922-46607348	chr3	+	46605937	46607054	True	NM_001174136,NM_024512	chr3,chr3	+,-	TDGF1,LRRC2	8990,1007
chr15:89629925-89630411	chr15	+	89630231	89630459	True	NM_007011,NM_152924,NM_000326	chr15,chr15,chr15	+,+,-	ABHD2,ABHD2,RLBP1	921,921,134513
chr5:87968061-87968634	chr5	+	87968074	87968623	True	NR_024383,NR_030741,NM_022650,NR_024384	chr5,chr5,chr5,chr5	-,-,+,-	LOC645323,MIR9-2,RASA1,LOC645323	5696,-5317,-1403359,580
chr4:165976728-165977925	chr4	+	165976744	165977722	True	NM_001100389,NM_152620	chr4,chr4	-,+	TMEM192,TRIM60	56359,-23644
chr3:48955720-48955930	chr3	+	48955722	48955844	True	NM_006321,NM_001123040	chr3,chr3	+,-	ARIH2,C3orf71	436,1024
chr18:64210308-64210891	chr18	+	64210550	64210766	True	NM_004361,NM_021153	chr18,chr18	+,-	CDH7,CDH19	-792444,60507
chr1:40101457-40102231	chr1	+	40101524	40101934	True	NM_014571,NM_203456	chr1,chr1	-,+	HEYL,PPIE	3470,102582
chr9:34181589-34182341	chr9	+	34181795	34182134	True	NR_033243,NM_016525,NM_015397,NM_001171204,NM_001171202,NM_001171203,NM_001171201	chr9,chr9,chr9,chr9,chr9,chr9,chr9	+,+,-,+,+,+,+	UBAP1,UBAP1,DCAF12,UBAP1,UBAP1,UBAP1,UBAP1	-2850,-2850,-55024,-2850,-2850,-2850,-2850
chr21:9968767-9969639	chr1	+	143468522	143468572	True	NR_033189,NR_027468	chr1,chr1	+,-	LOC100130000,FLJ39739	218557,275935
chr14:89879832-89880891	chr14	+	89880705	89880861	True	NR_036500,NM_005197	chr14,chr14	+,-	LOC400236,FOXN3	2836,2643
chrX:123096388-123096941	chrX	+	123096580	123096910	True	NM_001042751,NM_001042750,NM_006603,NM_001081550,NM_001042749	chrX,chrX,chrX,chrX,chrX	+,+,+,-,+	STAG2,STAG2,STAG2,THOC2,STAG2	-1075,-1075,-1075,-229676,-2156
chr19:58607056-58607448	chr19	+	58607188	58607394	True	NM_001145543,NM_007134,NM_001145544,NM_023926	chr19,chr19,chr19,chr19	-,+,-,-	ZSCAN18,ZNF135,ZSCAN18,ZSCAN18	2386,-36632,2386,2386
chr1:58703304-58704754	chr1	+	58703325	58704743	True	NM_021080,NR_034014	chr1,chr1	-,+	DAB1,LOC100131060	11518,546079
chr2:43881627-43882276	chr2	+	43881627	43881701	True	NM_001101330,NM_172069	chr2,chr2	-,+	LOC728819,PLEKHH2	21812,-17243
chr21:22175051-22176508	chr21	+	22175118	22176053	True	NM_004540,NR_024090	chr21,chr21	+,-	NCAM2,C21orf131	194579,14
chr3:129147406-129147692	chr3	+	129147409	129147735	True	NM_018262,NM_207307	chr3,chr3	+,-	IFT122,C3orf25	11232,81
chr1:187233995-187235469	chr1	+	187234179	187235505	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-584620,-436205
chr2:85635943-85636586	chr2	+	85636021	85636567	True	NM_001747,NM_198482	chr2,chr2	-,+	CAPG,SH2D6	1159,25350
chr19:47221746-47222632	chr19	+	47221910	47222594	True	NM_001079882,NM_001039885,NM_001079880,NM_001079881,NM_016457,NR_036157	chr19,chr19,chr19,chr19,chr19,chr19	-,+,-,-,-,-	PRKD2,FKRP,PRKD2,PRKD2,PRKD2,MIR320E	-4333,26708,-1526,-1526,-1526,-9308
chr9:69243595-69244700	chr9	+	69243738	69244027	True	NM_001085457,NM_001098805	chr9,chr9	-,+	CBWD6,ANKRD20A4	18623,137953
chrX:69496706-69497264	chrX	+	69496828	69497292	True	NM_004312,NM_016484,NM_001032726	chrX,chrX,chrX	+,-,+	ARR3,PDZD11,RAB41	-8694,12556,4729
chr2:32236316-32236980	chr2	+	32236335	32236766	True	NM_015955,NM_014946,NM_001137602	chr2,chr2,chr2	-,+,-	MEMO1,SPAST,MEMO1	-637,51913,-637
chr7:45155207-45157016	chr7	+	45155415	45156851	True	NM_030900,NM_199122,NM_004749,NR_002990,NM_005856	chr7,chr7,chr7,chr7,chr7	-,-,-,-,+	TBRG4,TBRG4,TBRG4,SNORA5B,RAMP3	-4098,-4098,-4098,-9717,40515
chr1:4045037-4045317	chr1	+	4045045	4045284	True	NR_024455,NM_207356	chr1,chr1	+,-	LOC100133612,C1orf174	-228128,-228188
chr11:369086-369489	chr11	+	369099	369159	True	NM_178537,NM_001135054	chr11,chr11	+,-	B4GALNT4,SIGIRR	635,45890
chr16:3629051-3629821	chr16	+	3629397	3629661	True	NM_024793,NM_178844	chr16,chr16	+,-	CLUAP1,NLRC3	-69554,-2005
chr19:56630387-56631077	chr19	+	56630492	56630976	True	NM_001002836,NM_018337	chr19,chr19	-,+	ZNF787,ZNF444	1723,21579
chr17:33467902-33468286	chr17	+	33467915	33468198	True	NM_173167,NM_001014445,NM_001033576,NM_018096	chr17,chr17,chr17,chr17	+,-,+,-	UNC45B,NLE1,UNC45B,NLE1	6637,1175,6637,1175
chr4:109579178-109580429	chr4	+	109579411	109580111	True	NR_026968,NM_021227	chr4,chr4	-,+	LOC285456,OSTC	-37798,-7732
chr2:201632394-201633139	chr2	+	201632497	201633181	True	NM_014670,NR_037886	chr2,chr2	+,-	BZW1,LOC100507140	43465,-32597
chr5:54573624-54574656	chr5	+	54573756	54574645	True	NM_015360,NM_019030	chr5,chr5	+,-	SKIV2L2,DHX29	28930,28938
chrX:70570244-70571171	chrX	+	70570295	70570889	True	NM_001171162,NM_004606	chrX,chrX	-,+	ZMYM3,TAF1	-95248,15224
chrX:70570244-70571171	chrX	-	70635314	70635908	False	NR_002226,NM_138923	chrX,chrX	-,+	INGX,TAF1	76747,-49263
chr20:3047296-3047580	chr20	+	3047295	3047481	True	NM_000490,NM_000915	chr20,chr20	-,+	AVP,OXT	17939,4784
chr21:45773681-45773974	chr21	+	45773728	45774014	True	NM_003307,NM_004928	chr21,chr21	+,-	TRPM2,C21orf2	-295,-14443
chr17:41149558-41150235	chr17	+	41149562	41150212	True	NM_000988,NM_001142654,NM_005533	chr17,chr17,chr17	+,-,+	RPL27,AARSD1,IFI35	233,-17017,8529
chr2:231241610-231243182	chr2	+	231241840	231243087	True	NM_001185015,NM_003113	chr2,chr2	-,+	SP110,SP100	-151396,37783
chr2:61371702-61372056	chr2	+	61371966	61372078	True	NR_036496,NM_001143960	chr2,chr2	-,+	LOC339803,C2orf74	82,164
chr1:166127765-166129555	chr1	+	166127938	166129590	True	NM_001017961,NR_030626,NR_037431	chr1,chr1,chr1	-,-,+	FAM78B,MIR921,MIR3658	6418,-3903,-250831
chr12:57520913-57521266	chr12	+	57520921	57521163	True	NM_002332,NR_033659	chr12,chr12	+,-	LRP1,STAT6	1118,-15725
chr15:31115842-31116379	chr15	+	31115858	31116160	True	NM_017762,NM_001146095	chr15,chr15	-,+	MTMR10,FAN1	167703,79894
chr12:54426692-54427106	chr12	+	54426700	54426999	True	NM_004503,NM_018953,NR_030753,NR_026658	chr12,chr12,chr12,chr12	+,+,+,-	HOXC6,HOXC5,MIR615,LOC100240735	-4557,47,734,48658
chr17:67322986-67323433	chr17	+	67323002	67323480	True	NM_172232,NM_002758	chr17,chr17	-,+	ABCA5,MAP2K6	-51,87357
chr13:67943551-67944139	chr13	+	67943666	67944183	True	NR_002717,NM_203487	chr13,chr13	+,-	ATXN8OS,PCDH9	2737161,-139198
chr2:11681403-11682462	chr2	+	11681641	11682281	True	NR_003095,NM_033090,NM_148903,NM_014668	chr2,chr2,chr2,chr2	-,+,+,+	E2F6,GREB1,GREB1,GREB1	-75344,569,-1612,-7450
chr7:77974829-77976420	chr7	+	77974849	77976432	True	NM_032936,NR_003680	chr7,chr7	-,+	TMEM60,RPL13AP17	-547102,126
chr1:178481650-178481864	chr1	+	178481774	178481846	True	NM_001170724,NM_032126,NM_001170722,NM_001170723,NM_004673	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	C1orf49,C1orf49,C1orf49,C1orf49,ANGPTL1	365,365,365,365,358419
chr6:108145599-108146174	chr6	+	108145733	108146178	True	NM_018013,NM_198081	chr6,chr6	+,-	SOBP,SCML4	-334468,-212
chr20:48335078-48335390	chr20	+	48335378	48335442	True	NM_015266,NM_004776	chr20,chr20	+,-	SLC9A8,B4GALT5	93807,-4957
chr14:75233878-75235243	chr14	+	75234102	75234734	True	NM_019589,NM_001039479	chr14,chr14	+,-	YLPM1,KIAA0317	-4094,-54295
chr22:33196423-33197445	chr22	+	33196465	33197145	True	NM_003490,NM_000362	chr22,chr22	-,+	SYN3,TIMP3	205711,151
chr1:151164380-151164996	chr1	+	151164932	151165000	True	NM_001135637,NM_001135636,NM_003557,NM_005997,NM_001135638	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	PIP5K1A,PIP5K1A,PIP5K1A,VPS72,PIP5K1A	6020,6020,6020,-2292,6020
chr22:24399198-24400406	chr22	+	24399325	24400401	True	NR_003082,NM_012295,NM_001201429,NM_001199281	chr22,chr22,chr22,chr22	-,+,+,+	GSTTP2,CABIN1,CABIN1,CABIN1	1548,7363,7363,7418
chr22:24399198-24400406	chr22	+	24344851	24345589	False	NR_003081,NM_000854	chr22,chr22	-,+	GSTTP1,GSTT2	1720,-22589
chr1:211664147-211664956	chr1	+	211664215	211664931	True	NM_183059,NM_001164688,NR_026761	chr1,chr1,chr1	-,-,+	RD3,RD3,C1orf97	1378,1378,-108171
chr1:207642205-207643140	chr1	+	207642484	207643151	True	NR_029832,NM_001877	chr1,chr1	-,+	MIR29C,CR2	332183,-14890
chr2:10260897-10261457	chr2	+	10260899	10261500	True	NM_001034,NM_001165931,NM_001037160	chr2,chr2,chr2	+,+,-	RRM2,RRM2,CYS1	1362,1194,-40361
chr17:74379630-74379878	chr17	+	74379759	74379867	True	NM_021972,NM_182965,NM_002766,NM_001142601,NM_001142602	chr17,chr17,chr17,chr17,chr17	+,+,-,+,+	SPHK1,SPHK1,PRPSAP1,SPHK1,SPHK1	822,822,-29529,822,1421
chr17:17286303-17286756	chr17	+	17286350	17286644	True	NM_003653,NM_020201	chr17,chr17	-,+	COPS3,NT5M	-101733,-79721
chr16:15744746-15745389	chr16	+	15744765	15745207	True	NM_001143979,NM_001184998,NM_014647,NR_030159,NM_001184999,NM_017668	chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,+,-,+	NDE1,KIAA0430,KIAA0430,MIR484,KIAA0430,NDE1	-7692,-7742,-7742,-7665,-7742,-733
chr15:63668301-63669353	chr15	+	63668419	63669284	True	NM_206925,NM_001218,NM_031301	chr15,chr15,chr15	-,-,+	CA12,CA12,APH1B	4842,4842,-98723
chr10:106032663-106033021	chr10	+	106032662	106033064	True	NM_001191013,NM_183239,NM_001191015,NM_001191014,NM_025145	chr10,chr10,chr10,chr10,chr10	+,+,+,+,-	GSTO2,GSTO2,GSTO2,GSTO2,WDR96	-4088,-4088,1822,1822,-40542
chr17:4488605-4489502	chr17	+	4488712	4489540	True	NM_198501,NM_001114974,NM_153338	chr17,chr17,chr17	+,+,-	SMTNL2,SMTNL2,GGT6	-1487,-929,-24836
chr12:132313584-132313820	chr12	+	132313584	132313824	True	NM_175066,NM_016155	chr12,chr12	-,+	DDX51,MMP17	315106,-694
chr16:30312617-30314269	chr16	+	30313135	30313685	True	NM_013292,NR_002473	chr16,chr16	+,-	MYLPF,LOC440354	72437,3619
chr16:30312617-30314269	chr16	+	29573428	29573744	False	NM_001030288,NR_002473	chr16,chr16	+,-	SPN,LOC440354	100555,3854
chr13:41242497-41242803	chr13	+	41242521	41242830	True	NM_002015,NM_014252	chr13,chr13	-,+	FOXO1,SLC25A15	-1787,120716
chr10:4877099-4878977	chr10	+	4877270	4878990	True	NM_001040177,NR_026743	chr10,chr10	+,-	AKR1E2,tAKR	-8920,79525
chr17:28702540-28703145	chr17	+	28702612	28703188	True	NM_206832,NM_001199775,NM_001304	chr17,chr17,chr17	-,+,+	TMIGD1,CPD,CPD	-41547,4307,2753
chrX:49028647-49028915	chrX	+	49028883	49028943	True	NM_002668,NM_006150,NM_001099682,NM_001099681,NM_001099680,NM_024859	chrX,chrX,chrX,chrX,chrX,chrX	+,-,+,+,+,+	PLP2,PRICKLE3,MAGIX,MAGIX,MAGIX,MAGIX	-750,13883,-9753,-9753,-8664,-9753
chr1:115235668-115236542	chr1	+	115235857	115236471	True	NM_000036,NM_003176,NM_001172626	chr1,chr1,chr1	-,+,-	AMPD1,SYCP1,AMPD1	1824,160983,1824
chr16:3505688-3506093	chr16	+	3506010	3506094	True	NM_001083600,NM_024845,NM_152457	chr16,chr16,chr16	+,+,-	NAT15,NAT15,ZNF597	1897,1897,-12520
chr1:160039317-160039767	chr1	+	160039349	160039545	True	NM_002241,NM_004983	chr1,chr1	-,+	KCNJ10,KCNJ9	556,11814
chr16:3072505-3073648	chr16	+	3072509	3073349	True	NM_001142350,NM_024339,NM_017885,NM_001002017,NM_001002018,NM_021195,NM_016639	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,-,-,-,-,+	THOC6,THOC6,HCFC1R1,HCFC1R1,HCFC1R1,CLDN6,TNFRSF12A	682,682,988,988,988,-4321,-2247
chr8:17253526-17254155	chr8	+	17253688	17254166	True	NM_001008539,NM_004686	chr8,chr8	+,-	SLC7A2,MTMR7	100430,16924
chr8:56687596-56689131	chr8	+	56687869	56688589	True	NM_152417,NM_024831	chr8,chr8	-,+	TMEM68,TGS1	-1984,-2129
chr4:189271135-189272937	chr4	+	189271215	189272647	True	NM_173553,NR_033869	chr4,chr4	-,+	TRIML2,LOC401164	-244807,104084
chr15:52585952-52586653	chr15	+	52585982	52586673	True	NM_018728,NM_002748	chr15,chr15	-,+	MYO5C,MAPK6	1373,-274624
chr11:67724154-67724934	chr11	+	67724187	67724257	True	NM_030930,NM_001161473	chr11,chr11	-,+	UNC93B1,ALDH3B1	47386,51790
chr4:10458047-10458355	chr4	+	10458057	10458353	True	NM_000798,NM_053042	chr4,chr4	+,-	DRD5,ZNF518B	-674851,729
chr1:153507496-153507753	chr1	+	153507524	153507800	True	NM_002962,NM_006271,NM_014624	chr1,chr1,chr1	-,+,-	S100A5,S100A1,S100A6	6491,93072,967
chr8:145580734-145581355	chr8	+	145580733	145581339	True	NM_024531,NM_012162,NR_015428,NM_024555	chr8,chr8,chr8,chr8	+,-,-,-	GPR172A,FBXL6,C8ORFK29,FBXL6	885,843,-2228,843
chr1:51790234-51791539	chr1	+	51790592	51791537	True	NM_001080494,NM_014372	chr1,chr1	-,+	TTC39A,RNF11	-2654,-88705
chr4:72634341-72635112	chr4	+	72634640	72635048	True	NM_004885,NM_000583	chr4,chr4	+,-	NPFFR2,GC	262472,15081
chr6:34187163-34187622	chr6	+	34187162	34187496	True	NM_002131,NM_001008703	chr6,chr6	+,-	HMGA1,C6orf1	17080,29458
chr4:42097283-42098881	chr4	+	42097620	42098478	True	NM_006345,NM_001159547	chr4,chr4	+,-	SLC30A9,BEND4	-105158,56474
chr21:44896992-44897377	chr21	+	44897137	44897409	True	NR_026960,NR_026863	chr21,chr21	+,-	C21orf125,C21orf84	-27284,744
chr16:75183150-75183615	chr16	+	75183204	75183665	True	NM_194436,NM_153688	chr16,chr16	-,+	LDHD,ZFP1	-32534,-838
chr2:68880400-68880645	chr2	+	68880451	68880665	True	NM_001024680,NM_138964	chr2,chr2	-,+	FBXO48,PROKR1	-186061,-7548
chr22:21771113-21771356	chr22	+	21771139	21771205	True	NM_015094,NR_003700	chr22,chr22	+,-	HIC2,PI4KAP2	487,100625
chr22:21771113-21771356	chr22	-	20428281	20428347	False	NR_003563,NR_026919	chr22,chr22	-,+	PI4KAP1,LOC150197	-29586,-234477
chr22:21771113-21771356	chr22	-	21872260	21872326	False	NR_003700,NM_003347	chr22,chr22	-,+	PI4KAP2,UBE2L3	-480,49630
chr4:122873499-122874332	chr4	+	122873560	122874326	True	NM_001130698,NM_005033	chr4,chr4	-,+	TRPC3,EXOSC9	-651,-151147
chr2:107484767-107484970	chr2	+	107484844	107485023	True	NR_003506,NM_001142351	chr2,chr2	+,-	PLGLA,ST6GAL2	-482126,17644
chr12:6831795-6832967	chr12	+	6832098	6832818	True	NM_001164095,NM_001164094,NM_153685,NM_001164093,NM_016319	chr12,chr12,chr12,chr12,chr12	+,+,-,+,+	COPS7A,COPS7A,C12orf53,COPS7A,COPS7A	426,331,-22286,630,361
chr6:28294329-28296027	chr6	+	28294382	28295646	True	NM_024493,NR_024164,NR_024165,NM_030899,NM_001135216	chr6,chr6,chr6,chr6,chr6	+,-,-,-,-	ZKSCAN3,ZNF323,ZNF323,ZNF323,ZNF323	22044,8323,8564,8564,8323
chr18:71814930-71815207	chr18	+	71814983	71815207	True	NM_014177,NM_152676,NM_001142958	chr18,chr18,chr18	+,-,-	C18orf55,FBXO15,FBXO15	538,16,-5
chr10:72541671-72542668	chr10	+	72541674	72542656	True	NM_003901,NM_152710	chr10,chr10	+,-	SGPL1,C10orf27	33047,2551
chr13:36920683-36920931	chr13	+	36920689	36920979	True	NM_015087,NM_001111046,NM_001142296,NM_001142295	chr13,chr13,chr13,chr13	-,+,-,-	SPG20,CCNA1,SPG20,SPG20	-43,84987,-43,5
chr17:43028883-43029603	chr17	+	43028882	43029601	True	NM_001080443,NM_213607	chr17,chr17	-,+	KIF18B,CCDC103	-3800,-51780
chr3:122276881-122277306	chr3	+	122276884	122277306	True	NM_031458,NM_001146105,NM_001146106,NM_138287,NM_001146104,NM_001146103,NM_001146102	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,+,-,-,-	PARP9,PARP9,PARP9,DTX3L,PARP9,PARP9,PARP9	6267,5891,5938,5878,5938,6267,5891
chr1:202612925-202613234	chr1	+	202613095	202613159	True	NM_001136504,NM_001197131	chr1,chr1	-,+	SYT2,PPP1R12B	-514,-103904
chr4:165866972-165868020	chr4	+	165866979	165867725	True	NM_153027,NM_001012414	chr4,chr4	+,-	C4orf39,TRIM61	10374,31143
chr9:136203733-136204411	chr9	+	136203932	136204211	True	NM_000972,NM_006753	chr9,chr9	+,-	RPL7A,SURF6	10857,-885
chr19:3062768-3063095	chr19	+	3062772	3063135	True	NM_002067,NM_198970,NM_198969,NM_001130	chr19,chr19,chr19,chr19	+,-,-,-	GNA11,AES,AES,AES	31272,-401,-57,-401
chr17:25961039-25961821	chr17	+	25961044	25961759	True	NM_000625,NM_009587,NM_002308,NR_024043	chr17,chr17,chr17,chr17	-,+,+,+	NOS2,LGALS9,LGALS9,LGALS9	165847,-2921,-2921,-2921
chr11:5009199-5010560	chr11	+	5009427	5010545	True	NM_001004755,NM_021801,NM_001004748	chr11,chr11,chr11	+,+,-	OR51L1,MMP26,OR51A2	9667,-55,-32484
chr1:21617489-21619148	chr1	+	21617765	21619164	True	NM_032264,NM_001113349,NM_001397	chr1,chr1,chr1	+,-,-	NBPF3,ECE1,ECE1	147466,-999,-783
chr20:62197173-62197570	chr20	+	62197287	62197509	True	NM_033405,NM_024059,NM_001037335	chr20,chr20,chr20	-,+,-	PRIC285,C20orf195,PRIC285	1648,-12965,8133
chr4:93103281-93103625	chr4	+	93103428	93103670	True	NM_183049,NM_001510	chr4,chr4	-,+	TMSL3,GRID2	-1343159,121879
chr11:66112794-66114091	chr11	+	66112861	66114017	True	NM_153266,NM_015399,NM_006876,NM_001024957,NM_004292	chr11,chr11,chr11,chr11,chr11	+,-,-,-,-	TMEM151A,BRMS1,B3GNT1,BRMS1,RIN1	-53539,-279,1194,-279,-8861
chr6:27981440-27983378	chr6	+	27981455	27983418	True	NM_033057,NM_012367	chr6,chr6	-,+	OR2B2,OR2B6	-101281,-56487
chr17:39635112-39636371	chr17	+	39635233	39636261	True	NM_005801,NM_003771,NM_002280	chr17,chr17,chr17	+,-,-	EIF1,KRT36,KRT35	208865,9905,1181
chr19:52400144-52401094	chr19	+	52400279	52400975	True	NM_032679,NM_023074,NR_024181,NM_001031721,NM_001135590	chr19,chr19,chr19,chr19,chr19	-,-,-,+,-	ZNF577,ZNF649,ZNF577,ZNF613,ZNF577	-9050,7380,-9090,29712,-9090
chr5:159343167-159343372	chr5	+	159343176	159343306	True	NM_000679,NM_052927	chr5,chr5	+,-	ADRA1B,PWWP2A	433,203196
chr10:124768190-124768680	chr10	+	124768201	124768385	True	NM_001609,NM_022466	chr10,chr10	+,-	ACADSB,IKZF5	43,-24
chr1:862295-862567	chr1	+	862399	862531	True	NM_152486,NR_026874	chr1,chr1	+,-	SAMD11,FLJ39609	-1329,-7582
chr19:58239991-58240516	chr19	+	58240058	58240467	True	NM_173632,NM_024833	chr19,chr19	+,-	ZNF776,ZNF671	17696,-1063
chr3:193715927-193716550	chr3	+	193715930	193716532	True	NR_027764,NR_033944,NM_005524	chr3,chr3,chr3	-,-,+	LOC100128023,LOC647323,HES1	-3903,4966,137398
chr12:133003042-133003382	chr12	+	133003121	133003347	True	NM_001142641,NM_001122636	chr12,chr12	+,-	FBRSL1,GALNT9	63809,-97216
chr16:66637281-66637619	chr16	+	66637509	66637619	True	NM_181553,NM_144601,NR_037619,NM_004614,NR_037613	chr16,chr16,chr16,chr16,chr16	+,+,+,-,+	CMTM3,CMTM3,CMTM3,TK2,CMTM3	947,608,1014,-53194,315
chr10:175897-176778	chr10	+	175925	176774	True	NM_006624,NM_001164154,NM_001202465,NM_001202464,NM_001202466,NM_212479	chr10,chr10,chr10,chr10,chr10,chr10	+,-,+,+,+,+	ZMYND11,TUBB8,ZMYND11,ZMYND11,ZMYND11,ZMYND11	3630,-80421,3649,4649,3649,3649
chr3:100350504-100352127	chr3	+	100350737	100352145	True	NM_032787,NM_014820	chr3,chr3	+,-	GPR128,TOMM70A	-22374,-230512
chr3:125653363-125653612	chr3	+	125653505	125653571	True	NM_001015050,NR_024251,NM_001195223	chr3,chr3,chr3	-,+,-	ALG1L,LOC100125556,ALG1L	2366,-18112,2366
chr13:113342754-113343093	chr13	+	113342808	113342998	True	NM_006322,NM_015205,NM_032189	chr13,chr13,chr13	-,+,+	TUBGCP3,ATP11A,ATP11A	-100327,1644,1644
chr2:42078352-42079729	chr2	+	42078413	42079387	True	NR_033996,NM_004718	chr2,chr2	+,-	LOC388942,COX7A2L	25307,509019
chr3:49897405-49898431	chr3	+	49897431	49898244	True	NM_005879,NM_203370,NM_024046	chr3,chr3,chr3	-,+,-	TRAIP,C3orf54,CAMKV	-3439,-56795,9176
chr5:94890121-94890554	chr5	+	94890133	94890549	True	NM_014639,NM_198150	chr5,chr5	-,+	TTC37,ARSK	210,275
chr5:76148584-76149340	chr5	+	76148616	76149212	True	NR_003014,NM_130772	chr5,chr5	-,+	SNORA47,S100Z	227242,-2845
chr11:36322390-36322723	chr11	+	36322509	36322719	True	NM_014186,NM_001160167	chr11,chr11	-,+	COMMD9,PRR5L	-11510,-4835
chr7:919149-919698	chr7	+	919187	919683	True	NM_015949,NM_006869	chr7,chr7	+,-	GET4,ADAP1	-3047,74666
chr2:119605884-119606084	chr2	+	119605944	119606104	True	NM_001426,NM_006770	chr2,chr2	-,+	EN1,MARCO	-185,93640
chr1:187518290-187518642	chr1	+	187518449	187518691	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-868890,-720468
chr20:19865655-19866029	chr20	+	19865681	19866038	True	NM_016652,NM_018993	chr20,chr20	-,+	CRNKL1,RIN2	170703,4171
chr4:54227846-54229608	chr4	+	54227919	54229662	True	NM_001134937,NM_152540	chr4,chr4	+,-	FIP1L1,SCFD2	14157,2641
chr1:247171742-247173001	chr1	+	247171771	247172866	True	NR_015422,NM_001204221,NR_037892,NM_020394	chr1,chr1,chr1,chr1	+,-,-,-	LOC149134,ZNF695,ZNF695,ZNF695	-218910,-376,-376,-376
chr1:36091954-36092790	chr1	+	36092010	36092750	True	NM_001199780,NM_178548	chr1,chr1	-,+	PSMB2,TFAP2E	4438,-53101
chr12:132414130-132414356	chr12	+	132414243	132414365	True	NM_175066,NM_001002020,NM_025215,NM_001002019	chr12,chr12,chr12,chr12	-,+,+,+	DDX51,PUS1,PUS1,PUS1	214565,-549,-481,-496
chr9:139659585-139660107	chr9	+	139659612	139660020	True	NM_178469,NM_203347,NR_033913	chr9,chr9,chr9	-,-,+	LCN8,LCN15,LOC100128593	-6881,-647,-19050
chr20:43104766-43105108	chr20	+	43104907	43105071	True	NM_198941,NM_024331,NM_001039199	chr20,chr20,chr20	-,+,+	SERINC3,TTPAL,TTPAL	45705,-411,-411
chr6:108581531-108581769	chr6	+	108581545	108581761	True	NM_145315,NM_152827,NM_003795	chr6,chr6,chr6	+,-,-	LACE1,SNX3,SNX3	34336,753,753
chr19:14909696-14910826	chr19	+	14909942	14910737	True	NM_032433,NM_198944	chr19,chr19	+,-	ZNF333,OR7C1	-109123,268
chr17:8053922-8054358	chr17	+	8054105	8054243	True	NM_002616,NR_037447	chr17,chr17	-,+	PER1,MIR3676	1560,36249
chr4:8444624-8445609	chr4	+	8444636	8445490	True	NM_152544,NM_001101667,NM_003501	chr4,chr4,chr4	+,-,-	METTL19,ACOX3,ACOX3	-2162,-2184,-2184
chr8:22223194-22223723	chr8	+	22223234	22223552	True	NM_015359,NM_001128431,NR_029714,NM_001135154,NM_001135153	chr8,chr8,chr8,chr8,chr8	+,+,-,+,+	SLC39A14,SLC39A14,MIR320A,SLC39A14,SLC39A14	1209,1209,-120678,1209,1497
chrX:117633849-117634102	chrX	+	117633862	117634000	True	NM_001168301,NM_144658	chrX,chrX	-,+	KLHL13,DOCK11	-382559,-4041
chr22:38433690-38433969	chr22	+	38433856	38434016	True	NM_013356,NM_001039583	chr22,chr22	-,+	SLC16A8,PICK1	45204,19245
chr4:89680201-89680402	chr4	+	89680212	89680448	True	NR_002806,NM_153757	chr4,chr4	+,-	FAM13AOS,NAP1L5	-49323,-61189
chr15:40653839-40654604	chr15	+	40654017	40654641	True	NM_207380,NM_033510	chr15,chr15	-,+	C15orf52,DISP2	-20849,-3634
chr22:21923020-21923403	chr22	+	21923077	21923382	True	NM_001128633,NR_028437,NM_003347,NR_028436	chr22,chr22,chr22,chr22	-,+,+,+	RIMBP3C,UBE2L3,UBE2L3,UBE2L3	-17327,-1171,-1171,-1171
chr14:95873030-95873781	chr14	+	95873115	95873726	True	NM_016417,NR_026779	chr14,chr14	+,-	GLRX5,C14orf139	127596,2758
chr2:219031638-219033439	chr2	+	219031676	219033054	True	NM_000634,NM_001557	chr2,chr2	-,+	CXCR1,CXCR2	40,-40998
chr7:152159811-152160515	chr7	+	152160133	152160473	True	NM_170606,NR_027387	chr7,chr7	-,+	MLL3,LOC100128822	-27043,735
chr5:148760577-148761711	chr5	+	148760662	148761680	True	NM_024028,NM_014443	chr5,chr5	+,-	PCYOX1L,IL17B	-23143,-1824
chr5:1547523-1548203	chr5	+	1547675	1548112	True	NM_024830,NM_004553	chr5,chr5	-,+	LPCAT1,NDUFS6	-23599,253383
chr11:278630-278910	chr11	+	278656	278958	True	NM_001025295,NM_138329	chr11,chr11	-,+	IFITM5,NLRP6	20618,-137
chr20:61450705-61450992	chr20	+	61450712	61451020	True	NM_001853,NM_006602	chr20,chr20	+,-	COL9A3,TCFL5	-2349,42145
chr1:205012591-205012857	chr1	+	205012710	205012906	True	NM_203376,NM_005076	chr1,chr1	-,+	TMEM81,CNTN2	40732,-421
chr14:105197979-105198179	chr14	+	105198019	105198095	True	NM_199165,NM_005163,NM_152328	chr14,chr14,chr14	+,-,+	ADSSL1,AKT1,ADSSL1	-1842,61893,-7536
chr4:26491941-26492151	chr4	+	26491950	26492100	True	NM_000730,NM_018317	chr4,chr4	-,+	CCKAR,TBC1D19	6,93445
chr19:46849478-46849920	chr19	+	46849601	46849939	True	NM_006247,NM_001204284,NM_032040	chr19,chr19,chr19	+,+,-	PPP5C,PPP5C,CCDC8	311,311,67030
chr22:22599491-22599977	chr22	+	22599605	22599973	True	NM_007128,NM_003935	chr22,chr22	+,-	VPREB1,TOP3B	-456,-262458
chr1:27217496-27218491	chr1	+	27217677	27218006	True	NM_018066,NM_006142,NM_022078	chr1,chr1,chr1	-,+,-	GPN2,SFN,GPATCH3	-808,-28095,9011
chr2:43063084-43064768	chr2	+	43063278	43064652	True	NM_020744,NM_012205	chr2,chr2	+,-	MTA3,HAAO	-267660,-43527
chr1:763180-763391	chr6	-	170921469	170921579	False	NM_001172085,NM_001199461	chr6,chr6	+,-	TBP,PDCD2	-58099,-27689
chr1:763180-763391	chr1	+	763259	763369	True	NR_024321,NR_015368	chr1,chr1	-,+	NCRNA00115,LOC643837	-357,-246
chr1:763180-763391	chr8	-	181914	182024	False	NM_001042416,NM_001042415,NR_003572,NM_173539	chr8,chr8,chr8,chr8	+,+,-,+	ZNF596,ZNF596,RPL23AP53,ZNF596	359,359,344,175
chr17:73505126-73506036	chr17	+	73505173	73506051	True	NM_207346,NM_020753,NM_001142643	chr17,chr17,chr17	+,-,-	TSEN54,CASKIN2,CASKIN2	6557,5626,-43
chrX:135382648-135382917	chrX	+	135382650	135382720	True	NM_001173516,NM_153834	chrX,chrX	-,+	MAP7D3,GPR112	-44009,401
chr1:48267711-48268432	chr1	+	48267780	48268358	True	NM_001194986,NM_004474	chr1,chr1	-,+	LOC388630,FOXD2	194254,-366142
chr20:55965864-55966201	chr20	+	55965870	55966098	True	NM_183425,NM_001190472,NM_017495	chr20,chr20,chr20	+,-,+	RBM38,MTRNR2L3,RBM38	364,-30992,364
chr19:18716858-18717094	chr19	+	18717011	18717073	True	NM_012109,NM_004750	chr19,chr19	+,-	TMEM59L,CRLF1	6608,637
chr16:83982088-83983083	chr16	+	83982413	83982732	True	NM_013370,NM_001080442,NM_182981,NM_182980	chr16,chr16,chr16,chr16	+,-,+,+	OSGIN1,SLC38A8,OSGIN1,OSGIN1	-12,93081,4094,-12
chrX:15752901-15753701	chrX	+	15753155	15753473	True	NR_002725,NM_007220	chrX,chrX	-,+	INE2,CA5B	52289,2938
chr21:34697728-34697959	chr21	+	34697771	34697983	True	NM_000629,NM_006134	chr21,chr21	+,-	IFNAR1,TMEM50B	-608,154348
chr3:149688635-149688858	chr3	+	149688637	149688858	True	NM_053024,NM_002628,NR_036538	chr3,chr3,chr3	-,-,+	PFN2,PFN2,LOC646903	-57,-57,207
chr2:225906130-225906568	chr2	+	225906145	225906467	True	NM_014689,NM_020864	chr2,chr2	-,+	DOCK10,KIAA1486	913,359134
chr19:12722048-12722316	chr19	+	12722128	12722328	True	NM_153358,NM_020714	chr19,chr19	+,-	ZNF791,ZNF490	-447,-505
chr6:14116407-14117421	chr6	+	14116654	14117426	True	NM_001031713,NM_001040280,NM_004233	chr6,chr6,chr6	-,+,+	CCDC90A,CD83,CD83	-301865,438,438
chr3:180624931-180625790	chr3	+	180625599	180625720	True	NM_005087,NM_001190233,NM_001013438,NM_001013439	chr3,chr3,chr3,chr3	+,-,+,+	FXR1,DNAJC19,FXR1,FXR1	4513,81645,4513,4513
chr20:30431756-30432187	chr20	+	30431756	30432158	True	NM_004118,NM_033118	chr20,chr20	-,+	FOXS1,MYLK2	1312,-24629
chr22:46408419-46408992	chr22	+	46408517	46408695	True	NR_027036,NR_027240	chr22,chr22	-,+	LOC100271722,LOC730668	32103,-6072
chr10:49892952-49893547	chr10	+	49893155	49893591	True	NM_020945,NM_021226	chr10,chr10	+,-	WDFY4,ARHGAP22	-20,-80017
chr5:1593094-1593358	chr5	+	1593166	1593298	True	NR_003263,NM_004553	chr5,chr5	-,+	SDHAP3,NDUFS6	1398,208197
chr5:1593094-1593358	chr5	-	236679	236745	False	NM_004168,NM_145265	chr5,chr5	+,-	SDHA,CCDC127	-18374,-18382
chr1:110880470-110880867	chr1	+	110880564	110880870	True	NM_001201545,NR_036595,NM_022768	chr1,chr1,chr1	+,-,+	RBM15,LOC440600,RBM15	1074,973,1074
chr17:72463327-72464015	chr17	+	72463394	72463976	True	NM_174892,NM_007261	chr17,chr17	-,+	CD300LB,CD300A	63687,-923
chr1:206642609-206644116	chr1	+	206642971	206643991	True	NM_001193321,NM_001193322,NM_014002,NM_001201478	chr1,chr1,chr1,chr1	+,+,+,-	IKBKE,IKBKE,IKBKE,EIF2D	34,34,34,141963
chrX:117956785-117957210	chrX	+	117956797	117956859	True	NM_173798,NM_020721	chrX,chrX	+,-	ZCCHC12,KIAA1210	927,327733
chr7:99260799-99261870	chr7	+	99260802	99261909	True	NM_145115,NM_000777	chr7,chr7	+,-	ZNF498,CYP3A5	-46289,15762
chr2:20647215-20647448	chr2	+	20647265	20647489	True	NM_015317,NM_004040	chr2,chr2	-,+	PUM2,RHOB	-120121,-481
chr7:134897492-134898026	chr7	+	134897748	134898029	True	NM_014149,NM_182489	chr7,chr7	-,+	WDR91,STRA8	-1432,18701
chr19:17377010-17377238	chr19	+	17377016	17377144	True	NM_001033549,NM_031941,NM_014173	chr19,chr19,chr19	+,-,+	BABAM1,USHBP1,BABAM1	1087,-1472,1087
chr9:134943680-134943917	chr9	+	134943686	134943880	True	NM_032536,NM_004269	chr9,chr9	+,-	NTNG2,MED27	93453,11423
chr2:110362969-110363713	chr2	+	110363271	110363709	True	NM_023016,NM_178584,NM_144710	chr2,chr2,chr2	+,-,-	ANKRD57,SEPT10,SEPT10	8201,8126,8126
chrX:7068555-7070286	chrX	+	7068595	7069687	True	NM_012080,NM_001135565,NM_000351,NM_001178136,NM_001178135	chrX,chrX,chrX,chrX,chrX	-,-,+,-,-	HDHD1,HDHD1,STS,HDHD1,HDHD1	-2364,-2364,67784,-2364,-2364
chr14:77565327-77567205	chr14	+	77565773	77567255	True	NM_174976,NM_033426	chr14,chr14	-,+	ZDHHC22,KIAA1737	40931,-1247
chr6:149951893-149952255	chr6	+	149951897	149952261	True	NM_138785,NM_001204076	chr6,chr6	+,-	C6orf72,KATNA1	-64420,17731
chr11:46939410-46939619	chr11	+	46939449	46939543	True	NM_001003676,NM_002334	chr11,chr11	+,-	C11orf49,LRP4	18707,680
chr1:21724307-21724553	chr1	+	21724369	21724587	True	NM_032264,NM_001113348	chr1,chr1	+,-	NBPF3,ECE1	42043,-52335
chr18:30091447-30091896	chr18	+	30091578	30091872	True	NR_003558,NM_022751	chr18,chr18	+,-	WBP11P1,FAM59A	-3,-41131
chr17:33568825-33569394	chr17	+	33568851	33569433	True	NM_152462,NM_144975	chr17,chr17	-,+	AMAC1,SLFN5	-47439,652
chrX:51632578-51632802	chrX	+	51632745	51632817	True	NM_001005333,NR_003711,NM_006986	chrX,chrX,chrX	+,-,+	MAGED1,SNORA11D,MAGED1	3880,173802,3880
chr1:45253224-45254782	chr1	+	45253327	45254653	True	NR_001456,NR_001457,NM_153274	chr1,chr1,chr1	+,+,-	SNORD38A,SNORD38B,BEST4	-9864,-9316,99
chr5:177014646-177014907	chr5	+	177014673	177014887	True	NM_017510,NR_024019	chr5,chr5	+,-	TMED9,FAM193B	4325,-33125
chr1:36026178-36026525	chr1	+	36026181	36026567	True	NM_014284,NM_001014839,NM_001014841,NM_024874	chr1,chr1,chr1,chr1	+,+,+,-	NCDN,NCDN,NCDN,KIAA0319L	-2839,-2839,-2839,-3144
chr20:62177628-62178236	chr20	+	62177756	62178210	True	NM_005975,NM_024059,NM_080823	chr20,chr20,chr20	-,+,-	PTK6,C20orf195,SRMS	-9049,6162,697
chr14:94939778-94941018	chr14	+	94939902	94940918	True	NM_006215,NM_001042518,NM_175739	chr14,chr14,chr14	+,-,-	SERPINA4,SERPINA9,SERPINA9	86864,1802,1802
chr14:71372786-71373963	chr14	+	71372855	71373901	True	NM_014982,NM_033141	chr14,chr14	+,-	PCNX,MAP3K9	220,-96967
chr21:15755670-15756000	chr21	+	15755717	15755994	True	NR_003087,NM_006948	chr21,chr21	+,-	ABCC13,HSPA13	-109648,-208
chr14:69954684-69956001	chr14	+	69954807	69956002	True	NM_001161498,NR_024630	chr14,chr14	+,-	UPF0639,C14orf162	-3387,81966
chr19:57655766-57656863	chr19	+	57655990	57656394	True	NM_020903,NM_052882	chr19,chr19	+,-	USP29,ZIM3	-24532,226
chrX:36980333-36980754	chrX	+	36980417	36980703	True	NM_006520,NM_001013736	chrX,chrX	-,+	DYNLT3,FAM47C	726236,45728
chr6:14802316-14803354	chr6	+	14802351	14803151	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	443375,860188
chr12:51476563-51476893	chr12	+	51476570	51476856	True	NM_030809,NM_015416	chr12,chr12	-,+	CSRNP2,LETMD1	527,-34537
chr15:74422438-74423015	chr15	+	74422609	74423057	True	NM_001130137,NM_001130136,NM_020851,NR_027073,NM_001130138	chr15,chr15,chr15,chr15,chr15	+,+,+,-,+	ISLR2,ISLR2,ISLR2,LOC283731,ISLR2	-664,-945,83,-990,-70
chr1:200183053-200183670	chr1	+	200183130	200183658	True	NM_001105517,NM_012482	chr1,chr1	+,-	FAM58B,ZNF281	-525,195558
chr19:52033084-52033909	chr19	+	52033192	52033718	True	NM_001177547,NM_198845,NM_198846,NM_001177549,NM_001177548,NM_007147,NM_001245	chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,+,-	SIGLEC6,SIGLEC6,SIGLEC6,SIGLEC6,SIGLEC6,ZNF175,SIGLEC6	1442,1442,1442,1442,1442,40812,1442
chrX:65718355-65718822	chrX	+	65718362	65718834	True	NM_001199689,NM_014799	chrX,chrX	-,+	EDA2R,HEPH	140108,-334304
chr10:52752483-52753249	chr10	+	52752485	52753129	True	NM_138933,NM_001098512	chr10,chr10	-,+	A1CF,PRKG1	-107050,-1591
chr21:36262848-36263246	chr21	+	36263032	36263200	True	NR_024351,NM_001001890,NM_001122607	chr21,chr21,chr21	+,-,-	NCRNA00160,RUNX1,RUNX1	-166978,-2045,-2045
chr6:39760888-39761302	chr6	+	39760894	39761309	True	NM_145027,NM_001201427,NM_015345	chr6,chr6,chr6	-,+,+	KIF6,DAAM2,DAAM2	-67713,-786,-172
chr13:50511142-50511416	chr13	+	50511226	50511424	True	NR_023351,NR_003268,NM_020456,NM_001127482	chr13,chr13,chr13,chr13	-,+,-,-	C13orf1,CTAGE10P,C13orf1,C13orf1	-601,-46732,-601,-601
chr6:1095214-1097122	chr6	+	1095289	1097160	True	NR_027116,NR_027115,NM_033260	chr6,chr6,chr6	-,-,+	LOC285768,LOC285768,FOXQ1	4457,4457,215514
chrX:13946557-13948453	chrX	+	13946751	13948458	True	NM_001001994,NM_003611	chrX,chrX	-,+	GPM6B,OFD1	8424,-193977
chr14:94577249-94577687	chr14	+	94577314	94577724	True	NM_032036,NM_001130080,NM_005532	chr14,chr14,chr14	-,+,+	IFI27L2,IFI27,IFI27	18283,-286,-286
chr13:21749707-21750330	chr13	+	21749934	21750364	True	NM_001166017,NM_145061,NM_024026	chr13,chr13,chr13	-,-,+	SKA3,SKA3,MRP63	427,427,7
chr16:19532895-19533100	chr16	+	19532900	19533094	True	NM_001199022,NM_014711,NM_016641	chr16,chr16,chr16	+,+,-	CP110,CP110,GDE1	2084,2084,406
chr2:74752239-74753356	chr2	+	74752364	74753391	True	NM_133637,NM_181575,NM_145074,NM_013247	chr2,chr2,chr2,chr2	-,-,+,+	DQX1,AUP1,HTRA2,HTRA2	67,3633,3140,3140
chr22:25597693-25597962	chr22	+	25597813	25597962	True	NM_004076,NM_182492	chr22,chr22	+,-	CRYBB3,LRP5L	-2040,160613
chr13:111806511-111807508	chr13	+	111806747	111807333	True	NM_017664,NM_003899	chr13,chr13	-,+	ANKRD10,ARHGEF7	-239331,-737
chr1:147381205-147382145	chr1	+	147381351	147381972	True	NR_003377,NM_005267	chr1,chr1	-,+	PDZK1P1,GJA8	102409,-6456
chr6:117151404-117152403	chr6	+	117151404	117152165	True	NM_148963,NM_173560	chr6,chr6	-,+	GPRC6A,RFX6	-1206,46210
chr20:46010474-46010872	chr20	+	46010630	46010708	True	NM_183048,NR_024594	chr20,chr20	-,+	ZMYND8,LOC100131496	-25156,-63438
chr1:159825008-159825359	chr1	+	159825024	159825375	True	NM_020125,NM_001013661,NM_001134233	chr1,chr1,chr1	+,-,-	SLAMF8,VSIG8,C1orf204	-28596,7129,-5
chr12:22211165-22212050	chr12	+	22211490	22212066	True	NM_018686,NM_020298	chr12,chr12	+,-	CMAS,ABCC9	-12386,-121862
chr19:44123729-44124152	chr19	+	44123808	44124142	True	NM_001145641,NM_182498	chr19,chr19	+,-	SRRM5,ZNF428	-7606,-36
chr2:233416354-233417012	chr2	+	233416358	233416863	True	NM_004846,NM_145702	chr2,chr2	+,-	EIF4E2,TIGD1	-1052,-1132
chrY:15814308-15814656	chrY	+	15814395	15814705	True	NM_182660,NM_004202	chrY,chrY	-,+	UTY,TMSB4Y	-221845,741
chr17:55055478-55055697	chr17	+	55055492	55055698	True	NM_021626,NM_004645	chr17,chr17	+,-	SCPEP1,COIL	-75,-17081
chr11:74203871-74204182	chr11	+	74203974	74204172	True	NM_006591,NM_001144869	chr11,chr11	+,-	POLD3,LIPT2	99456,633
chr10:89622571-89622967	chr10	+	89622574	89622918	True	NM_000314,NM_001126049	chr10,chr10	+,-	PTEN,KLLN	276,326
chr9:4654716-4655707	chr9	+	4654717	4655441	True	NM_203453,NM_001039395	chr9,chr9	+,-	PPAPDC2,C9orf68	6856,11283
chr11:8704819-8705086	chr11	+	8704848	8705130	True	NR_002580,NR_002977,NM_014818,NM_000990	chr11,chr11,chr11,chr11	+,+,-,+	SNORA3,SNORA45,TRIM66,RPL27A	643,1855,-24465,-904
chr19:54368872-54369386	chr19	+	54368935	54369335	True	NM_138373,NM_144687,NM_001020821,NM_001020820,NM_001020818,NM_001020819	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+	MYADM,NLRP12,MYADM,MYADM,MYADM,MYADM	1801,-41287,3324,275,3445,1801
chr1:19187408-19187728	chr1	+	19187639	19187777	True	NM_001135254,NM_152232	chr1,chr1	+,-	PAX7,TAS1R2	-230190,-1484
chrY:25344653-25344894	chrY	+	25344660	25344906	True	NM_020364,NM_020420,NM_001005375,NM_004081	chrY,chrY,chrY,chrY	+,-,-,-	DAZ3,DAZ4,DAZ4,DAZ1	20674,398,398,383
chrY:25344653-25344894	chrY	-	25365928	25366174	False	NM_020364,NM_020420,NM_001005786,NM_001005785,NM_020363	chrY,chrY,chrY,chrY,chrY	+,+,+,+,+	DAZ3,DAZ4,DAZ2,DAZ2,DAZ2	-398,-398,-375,-375,-375
chrY:25344653-25344894	chrY	+	26959045	26959291	False	NM_020364,NM_001005375,NM_020420	chrY,chrY,chrY	-,+,-	DAZ3,DAZ4,DAZ4	398,20675,398
chrY:25344653-25344894	chrY	-	26980314	26980560	False	NM_020364,NM_020420,NM_001005375,NM_001005786,NM_001005785	chrY,chrY,chrY,chrY,chrY	+,+,+,+,+	DAZ3,DAZ4,DAZ4,DAZ2,DAZ2	-398,-398,-398,-375,-375
chr17:9860329-9860719	chr17	+	9860395	9860646	True	NM_003644,NM_004246	chr17,chr17	-,+	GAS7,GLP2R	2171,-131065
chr2:47007481-47008274	chr2	+	47007530	47008258	True	NR_034099,NM_001171506	chr2,chr2	+,-	LOC388948,MCFD2	35548,134799
chr19:45416525-45417035	chr19	+	45416532	45417052	True	NM_145288,NM_001645,NM_000041	chr19,chr19,chr19	-,+,+	ZNF296,APOC1,APOE	162686,868,-7544
chr1:11923490-11924451	chr1	+	11923499	11924239	True	NM_002521,NR_037806	chr1,chr1	-,+	NPPB,NPPA-AS1	-4507,-23174
chr5:34175011-34176885	chr5	+	34175432	34176737	True	NM_016568,NR_037951	chr5,chr5	+,-	RXFP3,C1QTNF3-AMACR	-238992,-50799
chr5:34175011-34176885	chr5	-	21501827	21501903	False	NR_027026,NM_004061	chr5,chr5	+,-	GUSBP1,CDH12	-42289,1351878
chr18:77867629-77867850	chr18	+	77867720	77867898	True	NM_014913,NM_006701	chr18,chr18	+,-	ADNP2,TXNL4A	-856,-119188
chr2:677382-677758	chr2	+	677433	677557	True	NM_018968,NM_152834	chr2,chr2	+,-	SNTG2,TMEM18	268996,6
chr13:102569552-102569892	chr13	+	102569555	102569939	True	NM_004115,NM_004791	chr13,chr13	-,+	FGF14,ITGBL1	-560,-464640
chr16:28220883-28222420	chr16	+	28221004	28222388	True	NM_015171,NM_001024401	chr16,chr16	-,+	XPO6,SBK1	852,81451
chr19:5453833-5454877	chr19	+	5454054	5454906	True	NM_130855,NM_181710,NR_027064	chr19,chr19,chr19	-,+,-	PTPRS,ZNRF4,PLAC2	-113240,519,113149
chr16:21170710-21170946	chr16	+	21170929	21170991	True	NM_020422,NM_017539	chr16,chr16	+,-	TMEM159,DNAH3	-1068,-167
chr1:15948174-15948546	chr1	+	15948274	15948561	True	NM_032341,NM_024758	chr1,chr1	+,-	DDI2,AGMAT	-4381,-36669
chr4:47033195-47033451	chr4	+	47033246	47033416	True	NM_000809,NM_000812	chr4,chr4	-,+	GABRA4,GABRB1	-36822,-2
chr14:23067661-23068053	chr14	+	23067695	23068053	True	NM_022060,NM_001344	chr14,chr14	+,-	ABHD4,DAD1	-599,-9552
chr22:20460401-20460649	chr22	+	20460405	20460697	True	NM_015672,NR_026919	chr22,chr22	-,+	RIMBP3,LOC150197	1139,-266601
chr22:20460401-20460649	chr22	-	21738751	21739043	False	NM_001128635,NR_003700,NM_001128633	chr22,chr22,chr22	+,-,+	RIMBP3B,PI4KAP2,RIMBP3C	-762,132787,-1139
chr22:20460401-20460649	chr22	+	21904369	21904661	False	NM_001128635,NM_003347,NM_001128633	chr22,chr22,chr22	-,+,-	RIMBP3B,UBE2L3,RIMBP3C	762,17295,1139
chr11:130172588-130173250	chr11	+	130172984	130173184	True	NM_014155,NM_021978	chr11,chr11	-,+	ZBTB44,ST14	11476,-143366
chr6:46788421-46788651	chr6	+	46788420	46788692	True	NM_001168357,NM_005588	chr6,chr6	-,+	PLA2G7,MEP1A	-84990,-27383
chr17:29159349-29160820	chr17	+	29159578	29160306	True	NM_015986,NM_024857	chr17,chr17	-,+	CRLF3,ATAD5	-7800,-606
chr3:119188159-119188471	chr3	+	119188356	119188502	True	NM_018266,NM_152305,NR_024265	chr3,chr3,chr3	-,+,+	TMEM39A,POGLUT1,POGLUT1	-5885,-629,-629
chr17:72589108-72590580	chr17	+	72589364	72590453	True	NM_152460,NM_001115152	chr17,chr17	+,-	C17orf77,CD300LD	-8361,-994
chr12:56047442-56048425	chr12	+	56047542	56048458	True	NM_001144996,NM_206899	chr12,chr12	-,+	ITGA7,OR10P1	53278,-16923
chr3:185085799-185086417	chr3	+	185086022	185086458	True	NM_001966,NM_004721	chr3,chr3	-,+	EHHADH,MAP3K13	-114136,-5111
chr6:42946929-42947959	chr6	+	42947043	42947763	True	NM_006245,NM_180976,NM_000287,NM_180977	chr6,chr6,chr6,chr6	+,+,-,+	PPP2R5D,PPP2R5D,PEX6,PPP2R5D	4566,4566,-62,4566
chr10:45799029-45799450	chr10	+	45799034	45799250	True	NM_001004297,NM_000698	chr10,chr10	-,+	OR13A1,ALOX5	11856,70378
chr19:4640844-4641045	chr19	+	4640890	4640968	True	NM_001167942,NM_152362,NM_019107	chr19,chr19,chr19	+,+,-	TNFAIP8L1,TNFAIP8L1,C19orf10	-912,-1414,29497
chr2:220284020-220284748	chr2	+	220284271	220284797	True	NM_012100,NM_001927	chr2,chr2	-,+	DNPEP,DES	-31609,-1223
chr10:102027170-102027410	chr10	+	102027245	102027459	True	NM_018294,NM_005063	chr10,chr10	-,+	CWF19L1,SCD	28,79312
chr7:150497645-150497935	chr7	+	150497661	150497943	True	NM_001101312,NM_001101311,NM_018487,NM_014020,NM_001101314	chr7,chr7,chr7,chr7,chr7	-,-,+,-,-	TMEM176B,TMEM176B,TMEM176A,TMEM176B,TMEM176B	-40,-40,-70,555,-40
chr19:3065156-3065377	chr19	+	3065324	3065386	True	NM_002067,NM_198970,NM_198969,NM_001130	chr19,chr19,chr19,chr19	+,-,-,-	GNA11,AES,AES,AES	29021,-2953,-2360,-2953
chr13:115042638-115043683	chr13	+	115043066	115043304	True	NM_080687,NM_007368,NM_023011	chr13,chr13,chr13	+,-,+	UPF3A,RASA3,UPF3A	3754,-144971,3754
chr2:31361758-31363081	chr2	+	31362007	31362887	True	NM_014600,NM_024572	chr2,chr2	+,-	EHD3,GALNT14	93992,-436
chr2:71681240-71681535	chr2	+	71681332	71681566	True	NM_001130980,NM_001130981,NM_003494,NM_020459,NM_001130977,NM_001130976,NM_001130979,NM_001130978	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,-,+,+,+,+	DYSF,DYSF,DYSF,PAIP2B,DYSF,DYSF,DYSF,DYSF	-630,-630,-630,-227099,-630,-630,-630,-630
chr2:174630656-174631771	chr2	+	174630757	174631686	True	NM_145810,NM_001017371	chr2,chr2	+,-	CDCA7,SP3	-411255,197311
chr3:179371283-179371567	chr3	+	179371291	179371521	True	NM_177988,NM_003940	chr3,chr3	-,+	MRPL47,USP13	-48857,-409
chr3:121262752-121264512	chr3	+	121262878	121264402	True	NM_199420,NM_001012659	chr3,chr3	-,+	POLQ,ARGFX	501,22375
chr14:69610352-69611265	chr14	+	69610377	69610908	True	NM_003861,NM_001193360	chr14,chr14	-,+	DCAF5,EXD2	9057,47285
chr8:38586299-38586675	chr8	+	38586304	38586718	True	NM_001146216,NR_003129	chr8,chr8	+,-	TACC1,RNF5P1	-651,-127529
chr10:120354486-120354695	chr10	+	120354601	120354721	True	NM_004248,NM_199461	chr10,chr10	-,+	PRLHR,NANOS1	489,434506
chr4:53729191-53729444	chr4	+	53729273	53729485	True	NM_022832,NM_023940	chr4,chr4	-,+	USP46,RASL11B	-203771,-829
chr14:47749439-47751180	chr14	+	47749621	47750818	True	NM_182830,NM_020937	chr14,chr14	-,+	MDGA2,FANCM	61683,-2144542
chr2:233471522-233471792	chr2	+	233471629	233471699	True	NM_145702,NR_027663	chr2,chr2	-,+	TIGD1,EFHD1	-56403,-913
chr7:97498708-97499360	chr7	+	97498753	97499391	True	NM_133436,NM_183356,NM_001178076,NM_001178077,NM_001178075,NM_001673,NM_013998	chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,-,+	ASNS,ASNS,ASNS,ASNS,ASNS,ASNS,TAC1	2140,2517,2517,2140,2517,2517,-137533
chr15:99646367-99646940	chr15	+	99646468	99646921	True	NM_015286,NM_001167902,NM_145728	chr15,chr15,chr15	+,-,+	SYNM,PGPEP1L,SYNM	-1233,-95444,-1233
chr9:2623597-2624302	chr9	+	2623623	2624321	True	NR_015375,NM_003383,NM_001018056	chr9,chr9,chr9	-,+,+	FLJ35024,VLDLR,VLDLR	-1250,-1881,-1881
chr7:121944515-121945275	chr7	+	121944709	121945253	True	NM_001160264,NM_001024613,NR_036484	chr7,chr7,chr7	-,-,+	FEZF1,FEZF1,LOC154860	-144,-144,-1060
chr3:51579298-51580967	chr3	+	51579498	51580767	True	NM_015106,NM_014703	chr3,chr3	+,-	RAD54L2,VPRBP	-3957,-45480
chr13:52690734-52691213	chr13	+	52690743	52690967	True	NM_199289,NM_021645	chr13,chr13	-,+	NEK5,UTP14C	12311,-91975
chr6:10522279-10523196	chr6	+	10522508	10523154	True	NM_145649,NR_027793	chr6,chr6	+,-	GCNT2,C6orf218	-998,-87453
chr12:109250583-109251055	chr12	+	109250594	109250932	True	NM_001917,NM_001161330,NM_018984	chr12,chr12,chr12	+,-,-	DAO,SSH1,SSH1	22924,477,477
chr4:49329963-49330285	chr4	+	49329968	49330236	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-341754,-421153
chr4:49329963-49330285	chr4	-	49284060	49284328	False	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-295846,-375245
chr9:99840052-99840418	chr9	+	99840058	99840308	True	NR_002942,NM_001045477	chr9,chr9	-,+	LOC340508,FAM22G	3969,-148823
chrX:106006087-106006827	chrX	+	106006199	106006611	True	NM_194463,NM_001171706	chrX,chrX	+,-	RNF128,RIPPLY1	-36376,140000
chr6:26032737-26033648	chr6	+	26032936	26033552	True	NM_003537,NM_003544,NM_003538,NM_003513	chr6,chr6,chr6,chr6	-,-,+,-	HIST1H3B,HIST1H4B,HIST1H4A,HIST1H2AB	-648,-5456,-11094,294
chr19:15315211-15316088	chr19	+	15315487	15315788	True	NM_033025,NM_000435	chr19,chr19	+,-	SYDE1,NOTCH3	-97331,-3695
chr11:118272705-118273711	chr11	+	118272790	118273319	True	NR_033759,NM_001040651,NM_006476	chr11,chr11,chr11	+,-,+	ATP5L,CD3D,ATP5L	-739,-59331,-739
chrX:114424811-114425137	chrX	+	114424810	114425166	True	NM_001145346,NM_020871	chrX,chrX	+,-	RBMXL3,LRCH2	-898,43519
chr10:23984021-23984335	chr10	+	23984144	23984312	True	NM_153714,NM_001098500	chr10,chr10	-,+	C10orf67,KIAA1217	-350372,-520
chr15:73075887-73076088	chr15	+	73075909	73076137	True	NM_031284,NR_023319,NR_023318,NM_033028	chr15,chr15,chr15,chr15	-,-,-,+	ADPGK,ADPGK,ADPGK,BBS4	39,39,39,-97434
chr18:21031846-21033126	chr18	+	21032140	21032980	True	NM_003831,NM_032933	chr18,chr18	+,-	RIOK3,C18orf45	-97,-14215
chr14:75747336-75747680	chr14	+	75747350	75747608	True	NM_006827,NM_005252	chr14,chr14	-,+	TMED10,FOS	-104001,-1920
chr16:75031949-75032406	chr16	+	75032079	75032424	True	NM_030581,NM_032268	chr16,chr16	-,+	WDR59,ZNRF1	-13062,490
chr1:242162965-242163947	chr1	+	242163137	242163984	True	NM_006027,NM_001004343	chr1,chr1	+,-	EXO1,MAP1LC3C	-151161,-752
chr3:169538415-169539970	chr3	+	169538519	169539951	True	NM_001080460,NM_001172779,NM_153353,NM_001172780	chr3,chr3,chr3,chr3	+,-,-,-	LRRIQ4,LRRC34,LRRC34,LRRC34	-136,-7945,-7945,-7945
chr16:29972667-29973040	chr16	+	29972717	29972939	True	NM_001083613,NM_003609,NM_194280	chr16,chr16,chr16	+,-,+	TMEM219,HIRIP3,TMEM219	411,34523,411
chr16:25267061-25268232	chr16	+	25267410	25268219	True	NM_001012981,NM_001169	chr16,chr16	-,+	ZKSCAN2,AQP8	686,-39183
chr18:53617616-53618236	chr18	+	53617671	53618237	True	NM_003199,NM_015285	chr18,chr18	-,+	TCF4,WDR7	-361811,700378
chr22:17518144-17518398	chr22	+	17518162	17518356	True	NM_001037814,NR_015352	chr22,chr22	-,+	GAB4,CECR7	-29050,-753
chr22:17518144-17518398	chr21	+	11169769	11169827	False	NM_001187,NR_037458	chr21,chr21	-,+	BAGE,MIR3687	-70832,-1343617
chr15:67457628-67457965	chr15	+	67457704	67458014	True	NM_001145104,NM_024666	chr15,chr15	+,-	SMAD3,AAGAB	478,89110
chr1:211290820-211291254	chr1	+	211290873	211291271	True	NM_001136225,NM_002238	chr1,chr1	+,-	RCOR3,KCNH1	141436,16236
chr7:17361358-17362758	chr7	+	17361601	17362630	True	NM_001621,NM_176813	chr7,chr7	+,-	AHR,AGR3	-23389,-439988
chr15:59225977-59226270	chr15	+	59226089	59226297	True	NM_001013843,NM_024755,NM_017610	chr15,chr15,chr15	-,-,+	SLTM,SLTM,RNF111	-237,-237,53567
chr6:14699505-14701308	chr6	+	14699726	14701255	True	NM_001031713,NM_004973	chr6,chr6	-,+	CCDC90A,JARID2	-884937,545271
chr6:44125340-44126475	chr6	+	44125440	44126518	True	NM_007058,NM_032111	chr6,chr6	+,-	CAPN11,MRPL14	29,-30249
chr4:113608421-113609332	chr4	+	113608622	113609341	True	NM_015454,NR_029857	chr4,chr4	+,-	LARP7,MIR302B	-50066,-38909
chr13:115076463-115077898	chr13	+	115076925	115077945	True	NM_001164145,NM_001164144,NM_007368	chr13,chr13,chr13	+,+,-	ZNF828,ZNF828,RASA3	2019,2019,-178830
chr11:75272746-75273066	chr11	+	75272796	75273014	True	NM_030792,NM_001235	chr11,chr11	-,+	GDPD5,SERPINH1	-36197,155
chr11:60291097-60292291	chr11	+	60291156	60291926	True	NM_001100909,NM_001012417,NM_004778	chr11,chr11,chr11	+,+,-	MS4A13,MS4A13,GPR44	-8334,-8334,331574
chrX:18689780-18690520	chrX	+	18689954	18690415	True	NM_000330,NM_006240	chrX,chrX	-,+	RS1,PPEF1	-27,18629
chr11:75140184-75140518	chr11	+	75140232	75140566	True	NR_000025,NM_001039548	chr11,chr11	+,-	SNORD15B,KLHL35	-24818,1158
chr6:118969339-118969624	chr6	+	118969472	118969560	True	NM_001042475,NM_206921,NM_002667	chr6,chr6,chr6	-,-,+	C6orf204,C6orf204,PLN	3512,3512,-100084
chrX:10587354-10588144	chrX	+	10587360	10588112	True	NM_000381,NM_033289,NM_001830	chrX,chrX,chrX	-,-,+	MID1,MID1,CLCN4	612,612,-462433
chr1:6267073-6267475	chr1	+	6267093	6267483	True	NM_000983,NM_207396	chr1,chr1	-,+	RPL22,RNF207	-7414,-955
chr6:42787317-42789199	chr6	+	42787364	42789052	True	NM_015349,NM_001008739	chr6,chr6	+,-	KIAA0240,C6orf226	-61,69552
chr8:54775840-54776378	chr8	+	54775863	54776223	True	NM_170587,NM_213619	chr8,chr8	+,-	RGS20,ATP6V1H	-11546,-20013
chr3:195345636-195346340	chr3	+	195345689	195346389	True	NM_001647,NR_003265	chr3,chr3	-,+	APOD,SDHAP2	-34613,38520
chr3:195345636-195346340	chr3	+	195451741	195452726	False	NM_001098516,NM_004532,NM_152673	chr3,chr3,chr3	+,-,+	MUC20,MUC4,MUC20	-694,86472,-4039
chr6:90536365-90537266	chr6	+	90536557	90537223	True	NM_001137667,NM_014611,NM_001137668,NM_012115	chr6,chr6,chr6,chr6	+,-,+,+	CASP8AP2,MDN1,CASP8AP2,CASP8AP2	2395,-7115,2395,2395
chr5:32311215-32311906	chr5	+	32311355	32311798	True	NM_001040446,NM_006713	chr5,chr5	-,+	MTMR12,SUB1	1367,273806
chr19:50326112-50327157	chr19	+	50326548	50326986	True	NM_025129,NR_033269,NM_001171937,NM_030973	chr19,chr19,chr19,chr19	-,-,-,+	FUZ,FUZ,FUZ,MED25	-9981,-9981,-9981,-5063
chr16:66782624-66783256	chr16	+	66782694	66783270	True	NM_005182,NM_006141	chr16,chr16	+,-	CA7,DYNC1LI2	95011,2305
chr15:43661963-43662921	chr15	+	43662034	43662784	True	NM_014444,NM_152455	chr15,chr15	+,-	TUBGCP4,ZSCAN29	528,-40
chr17:66038245-66038718	chr17	+	66038442	66038700	True	NM_002266,NM_181656	chr17,chr17	+,-	KPNA2,C17orf58	-6645,-48677
chr9:95821975-95823708	chr9	+	95822170	95823724	True	NM_004148,NM_145006	chr9,chr9	-,+	NINJ1,SUSD3	72896,-1232
chr9:116264455-116265521	chr9	+	116264564	116265309	True	NM_017443,NM_130795	chr9,chr9	-,+	POLE3,RGS3	-91535,-909
chr5:85589040-85589466	chr5	+	85589042	85589392	True	NR_003719,NR_036243	chr5,chr5	+,-	NBPF22P,MIR4280	-10831,821429
chr7:105160828-105161060	chr7	+	105160862	105160952	True	NM_021930,NM_019042	chr7,chr7	+,-	RINT1,PUS7	11579,1783
chr22:20121655-20122186	chr22	+	20121712	20122140	True	NM_001185024,NM_013373,NM_182984	chr22,chr22,chr22	+,+,-	ZDHHC8,ZDHHC8,TRMT2A	-2399,-2399,-16944
chr3:128447599-128448267	chr3	+	128447624	128448041	True	NM_002950,NM_004637	chr3,chr3	-,+	RPN1,RAB7A	-77905,-2696
chr7:63666968-63667461	chr7	+	63667263	63667503	True	NM_001159524,NM_178558	chr7,chr7	+,-	ZNF735,ZNF680	77,356052
chr2:71225180-71226245	chr2	+	71225274	71226121	True	NM_144582,NM_024933	chr2,chr2	-,+	TEX261,ANKRD53	-3273,-19755
chr19:43242963-43244195	chr19	+	43243040	43243686	True	NR_036584,NM_021016	chr19,chr19	+,-	LOC100289650,PSG3	82328,1032
chr13:111272069-111272598	chr13	+	111272479	111272631	True	NM_017817,NM_018210	chr13,chr13	-,+	RAB20,CARKD	-58408,-4522
chr1:93817083-93817784	chr1	+	93817277	93817598	True	NR_034089,NM_001938	chr1,chr1	-,+	LOC100131564,DR1	-5909,-5851
chr3:44620186-44620396	chr17	-	17075048	17075098	True	NM_178836,NM_201274	chr17,chr17	-,+	PLD6,MPRIP	34598,-128992
chr1:1285275-1285779	chr1	+	1285291	1285371	True	NM_152228,NM_004421,NM_032348	chr1,chr1,chr1	+,-,-	TAS1R3,DVL1,MXRA8	-18616,-799,8594
chr12:117631379-117632320	chr12	+	117631491	117632072	True	NM_153348,NM_033624,NM_015002	chr12,chr12,chr12	+,-,-	FBXW8,FBXO21,FBXO21	-282781,-3191,-3191
chr21:43771864-43772534	chr21	+	43772153	43772569	True	NM_005423,NM_001001895	chr21,chr21	-,+	TFF2,UBASH3A	-945,51449
chr14:36002477-36002754	chr14	+	36002476	36002728	True	NM_032594,NM_020529	chr14,chr14	+,-	INSM2,NFKBIA	519,-128516
chr4:56417791-56419684	chr4	+	56418602	56419554	True	NM_004898,NM_018475	chr4,chr4	-,+	CLOCK,TMEM165	-5605,-156577
chr2:129276782-129277636	chr2	+	129277042	129277576	True	NM_004807,NR_027671	chr2,chr2	-,+	HS6ST1,UGGT1	-200871,-428311
chr17:12565264-12565833	chr17	+	12565460	12565793	True	NM_001146312,NM_153604,NM_001165962	chr17,chr17,chr17	+,+,-	MYOCD,MYOCD,ELAC2	3413,3413,355639
chr12:56545153-56545375	chr12	+	56545155	56545421	True	NM_021019,NM_002475,NM_079423,NM_001130420,NM_001199629	chr12,chr12,chr12,chr12,chr12	+,+,+,-,+	MYL6,MYL6B,MYL6,SMARCC2,MYL6B	6623,782,6623,37980,782
chr6:168476208-168476522	chr6	+	168476286	168476544	True	NM_030615,NM_001122841,NM_024919	chr6,chr6,chr6	+,-,-	KIF25,FRMD1,FRMD1	-57784,38,3345
chr19:1847074-1847767	chr19	+	1847140	1847742	True	NR_034114,NM_020695	chr19,chr19	+,-	LOC100288123,REXO1	-25103,760
chr6:2764288-2764567	chr6	+	2764367	2764585	True	NM_001012418,NM_020135,NM_130395	chr6,chr6,chr6	-,+,+	MYLK4,WRNIP1,WRNIP1	-13213,1080,1080
chr11:33095685-33096847	chr11	+	33095923	33096713	True	NR_015451,NM_001326	chr11,chr11	+,-	NCRNA00294,CSTF3	982,86382
chr1:6418265-6419008	chr1	+	6418264	6418940	True	NM_031475,NM_181865,NM_181866	chr1,chr1,chr1	+,-,-	ESPN,ACOT7,ACOT7	65907,1874,114
chr16:50187148-50187348	chr16	+	50187148	50187387	True	NM_001040285,NM_001040284,NM_001173984	chr16,chr16,chr16	+,+,-	PAPD5,PAPD5,BRD7	-370,-370,215508
chr10:46011114-46011959	chr10	+	46011298	46011936	True	NM_001002266,NM_000698	chr10,chr10	-,+	MARCH8,ALOX5	18933,-141721
chr22:50527815-50528277	chr22	+	50527902	50528192	True	NM_139202,NM_018995,NM_015166,NM_001164105,NM_001164104	chr22,chr22,chr22,chr22,chr22	-,+,-,+,+	MLC1,MOV10L1,MLC1,MOV10L1,MOV10L1	-4121,242,-3544,492,242
chr15:22568103-22569024	chr1	-	8714620	8714673	True	NM_001215,NM_001042681	chr1,chr1	+,-	CA6,RERE	291248,163079
chr2:210467651-210468747	chr2	+	210467673	210468763	True	NM_152519,NM_031847	chr2,chr2	-,+	C2orf67,MAP2	567338,-23321
chr11:5812625-5812946	chr11	+	5812672	5812866	True	NM_001005174,NM_001001913	chr11,chr11	+,-	OR52N2,OR52N1	28699,-2626
chrX:117959719-117961217	chrX	+	117959741	117961180	True	NM_173798,NM_020721	chrX,chrX	+,-	ZCCHC12,KIAA1210	-2005,323412
chr7:150036859-150037233	chr7	+	150036890	150037278	True	NM_138434,NM_002889	chr7,chr7	+,-	C7orf29,RARRES2	-10003,1535
chr13:39260289-39260875	chr13	+	39260354	39260770	True	NM_207361,NM_001144033	chr13,chr13	+,-	FREM2,STOML3	402,304282
chr5:52856867-52857924	chr5	+	52856973	52857708	True	NR_030307,NM_002495	chr5,chr5	-,+	MIR581,NDUFS4	389771,-563
chr2:240970112-240970335	chr2	+	240970184	240970366	True	NM_001005853,NR_037808,NM_004544	chr2,chr2,chr2	-,+,-	OR6B2,LOC150935,NDUFA10	-338,-285681,-5365
chr16:202309-203684	chr16	+	202377	203265	True	NM_001077350,NM_005332	chr16,chr16	-,+	NPRL3,HBZ	-13705,-114
chr1:934264-934467	chr1	+	934318	934400	True	NM_005101,NM_021170,NM_001142467	chr1,chr1,chr1	+,-,-	ISG15,HES4,HES4	14446,1202,1202
chr7:90892895-90893317	chr7	+	90892948	90893357	True	NM_006980,NM_003505	chr7,chr7	-,+	MTERF,FZD1	616709,425
chr11:64782881-64783441	chr11	+	64782882	64783400	True	NM_001199745,NR_037650,NM_001667,NM_138456	chr11,chr11,chr11,chr11	+,+,+,-	ARL2,ARL2-SNX15,ARL2,BATF2	-1348,-1348,-1348,-18365
chr3:196467145-196467401	chr3	+	196467219	196467424	True	NM_032898,NM_002577	chr3,chr3	-,+	C3orf34,PAK2	-28096,-542
chr6:108322926-108323699	chr6	+	108323113	108323728	True	NM_007214,NM_003269	chr6,chr6	-,+	SEC63,NR2E1	-43631,163486
chr4:700402-700812	chr4	+	700710	700860	True	NM_006315,NM_032219	chr4,chr4	+,-	PCGF3,MFSD7	-1188,-17737
chr16:8892907-8893935	chr16	+	8892957	8893761	True	NM_000303,NM_015421	chr16,chr16	+,-	PMM2,TMEM186	-1342,-1452
chr1:155216064-155217587	chr1	+	155216075	155217293	True	NM_000157,NM_020897,NM_001171812,NM_001171811,NM_001005742,NM_198264,NM_006589,NM_001005741	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,+,-,-,-,-,-,-	GBA,HCN3,GBA,GBA,GBA,FAM189B,FAM189B,GBA	-5006,30080,-5009,-1422,-1422,8031,8031,-1422
chr11:82867596-82868020	chr11	+	82867907	82868029	True	NM_015885,NM_014488	chr11,chr11	+,-	PCF11,RAB30	107,-85023
chr17:3571142-3571364	chr17	+	3571210	3571272	True	NM_001204698,NM_001014764,NM_014604,NM_031298	chr17,chr17,chr17,chr17	-,+,-,+	TAX1BP3,TMEM93,TAX1BP3,TMEM93	751,817,751,817
chr19:14586705-14587014	chr19	+	14586807	14586951	True	NM_000955,NM_001146693	chr19,chr19	-,+	PTGER1,LOC100130932	-633,12806
chr1:151322214-151322906	chr1	+	151322541	151322960	True	NM_000449,NM_002796,NM_001025603	chr1,chr1,chr1	-,+,-	RFX5,PSMB4,RFX5	-2772,49080,-2772
chr18:24442390-24443234	chr18	+	24442449	24443111	True	NM_004028,NR_026908,NM_001650	chr18,chr18,chr18	-,+,-	AQP4,C18orf16,AQP4	-28,2160,2656
chr16:57438376-57439581	chr16	+	57438461	57439623	True	NM_020313,NM_002987	chr16,chr16	-,+	CIAPIN1,CCL17	41796,54
chr9:135937156-135937560	chr9	+	135937197	135937535	True	NM_001807,NM_006266	chr9,chr9	+,-	CEL,RALGDS	7,59076
chr9:135937156-135937560	chr9	+	135957755	135958093	False	NR_001275,NM_006266	chr9,chr9	+,-	CELP,RALGDS	10,38518
chr5:1595094-1596203	chr5	+	1595324	1595627	True	NR_003263,NM_004553	chr5,chr5	-,+	SDHAP3,NDUFS6	-678,205868
chr12:64784476-64785063	chr12	+	64784535	64784939	True	NM_007235,NM_001170633,NM_001099676	chr12,chr12,chr12	+,-,-	XPOT,C12orf56,C12orf56	13213,-190,-190
chr12:128092392-128092827	chr12	+	128092469	128092642	True	NR_033970,NR_033987	chr12,chr12	-,+	LOC440117,FLJ37505	-733233,273519
chr9:70177929-70178145	chr9	+	70177983	70178125	True	NM_001126334,NR_024443	chr9,chr9	-,+	FOXD4L5,LOC100133920	740,-526673
chr9:70177929-70178145	chr9	-	42717981	42718065	False	NR_026759,NM_199244,NM_001099279	chr9,chr9,chr9	-,+,+	FAM95B1,FOXD4L4,FOXD4L2	315297,-798,-798
chr9:70177929-70178145	chr9	+	70428899	70428983	False	NM_199244,NM_201453,NM_001099279	chr9,chr9,chr9	-,+,-	FOXD4L4,CBWD3,FOXD4L2	798,427855,798
chr9:70177929-70178145	chr9	-	70917783	70917867	False	NR_015423,NM_199135	chr9,chr9	-,+	LOC572558,FOXD4L3	54940,-51
chr4:2840436-2841425	chr4	+	2840460	2841291	True	NM_014190,NM_176801,NM_024309,NM_014189,NM_001119	chr4,chr4,chr4,chr4,chr4	+,+,-,+,+	ADD1,ADD1,TNIP2,ADD1,ADD1	4292,4292,-82357,4292,4292
chr16:21656750-21658501	chr16	+	21657243	21658462	True	NM_144672,NM_005849	chr16,chr16	+,-	OTOA,IGSF6	31372,5560
chr12:52244679-52245587	chr12	+	52244692	52245497	True	NM_001130015,NM_001013690	chr12,chr12	+,-	ANKRD33,FIGNL2	36295,-18991
chr13:114998299-114999004	chr13	+	114998307	114998809	True	NM_001078645,NM_003903,NM_007368	chr13,chr13,chr13	+,+,-	CDC16,CDC16,RASA3	1552,1552,-100212
chr15:75184299-75184792	chr15	+	75184625	75184767	True	NM_002435,NM_020447	chr15,chr15	+,-	MPI,C15orf17	-2267,14745
chr13:26853613-26854554	chr13	+	26853657	26854550	True	NM_001260,NM_005977	chr13,chr13	+,-	CDK8,RNF6	-24965,-57149
chr7:134853061-134853764	chr7	+	134853183	134853791	True	NM_018295,NR_024186,NR_024185,NM_024033	chr7,chr7,chr7,chr7	+,-,-,-	TMEM140,C7orf49,C7orf49,C7orf49	-20469,1791,1791,1791
chr21:38362487-38362829	chr21	+	38362608	38362876	True	NM_000411,NM_018962	chr21,chr21	-,+	HLCS,DSCR6	-72,15986
chr6:170614899-170615177	chr6	+	170614933	170615223	True	NM_032448,NM_005618	chr6,chr6	+,-	FAM120B,DLL1	620,-15236
chr12:67022595-67024096	chr12	+	67022921	67023752	True	NM_001178074,NM_033647	chr12,chr12	-,+	GRIP1,HELB	49223,-326625
chr2:207135586-207136435	chr2	+	207135695	207136264	True	NM_020923,NM_005279	chr2,chr2	+,-	ZDBF2,GPR1	3258,-52924
chr6:106957505-106958231	chr6	+	106957821	106958097	True	NM_032730,NM_001624	chr6,chr6	-,+	RTN4IP1,AIM1	119326,1632
chr11:10879593-10879980	chr11	+	10879601	10879937	True	NM_001143667,NR_034137,NM_021211	chr11,chr11,chr11	-,+,-	ZBED5,LOC729013,ZBED5	13,78,13
chr2:198316305-198316955	chr2	+	198316327	198316659	True	NM_025147,NM_001005526	chr2,chr2	+,-	COQ10B,SF3B1	1571,-16556
chr22:25365161-25366041	chr22	+	25365231	25366039	True	NM_001145206,NM_001001663	chr22,chr22	+,-	KIAA1671,TMEM211	57901,-29917
chr3:2141477-2141836	chr3	+	2141550	2141878	True	NM_175607,NM_000564	chr3,chr3	+,-	CNTN4,IL5RA	-1058,1010230
chr20:33147873-33148212	chr20	+	33148078	33148142	True	NM_080476,NM_032514	chr20,chr20	-,+	PIGU,MAP1LC3A	116997,-1610
chr14:74028359-74028923	chr14	+	74028527	74028813	True	NM_006821,NM_203309	chr14,chr14	+,-	ACOT2,HEATR4	6958,-2876
chr1:1165506-1166131	chr1	+	1165552	1166179	True	NM_080605,NM_016547,NM_016176	chr1,chr1,chr1	+,-,-	B3GALT6,SDF4,SDF4	1449,1318,1318
chr15:101143160-101144990	chr15	+	101143411	101145000	True	NM_198243,NM_001040616,NM_024708	chr15,chr15,chr15	+,-,+	ASB7,LINS,ASB7	-707,-966,-707
chr12:11246099-11246824	chr12	+	11246224	11246594	True	NR_036583,NM_176884	chr12,chr12	+,-	LOC100129361,TAS2R43	77185,-1312
chr20:57209469-57209983	chr20	+	57209494	57209865	True	NM_153360,NM_001001433	chr20,chr20	-,+	APCDD1L,STX16	-119545,16443
chr2:238533983-238534884	chr2	+	238534145	238534907	True	NM_001137550,NR_033308	chr2,chr2	+,-	LRRFIP1,RAB17	1316,-34376
chrX:43728248-43729725	chrX	+	43728292	43729724	True	NM_000898,NM_000240	chrX,chrX	-,+	MAOB,MAOA	12047,-212936
chr4:37456394-37457186	chr4	+	37456558	37457156	True	NM_001104629,NM_001085399	chr4,chr4	+,-	C4orf19,RELL1	-1063,230893
chr21:45759329-45761264	chr21	+	45759488	45761048	True	NM_003307,NM_004928	chr21,chr21	+,-	TRPM2,C21orf2	12435,-203
chr17:1304006-1304283	chr17	+	1304207	1304293	True	NM_006761,NR_024058,NR_028514	chr17,chr17,chr17	-,-,+	YWHAE,YWHAE,LOC100306951	-651,-651,115919
chr10:75317334-75318985	chr10	+	75317573	75318521	True	NM_152586,NM_004922	chr10,chr10	-,+	USP54,SEC24C	16969,185609
chr11:60622944-60623565	chr11	+	60623067	60623573	True	NM_004778,NM_207341	chr11,chr11	-,+	GPR44,ZP1	-79,11441
chr16:3284131-3284655	chr16	+	3284484	3284628	True	NR_002169,NM_003454,NM_001145447,NM_198088,NM_198087,NM_001145448,NM_001145446	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,-,-,-,-	OR1F2P,ZNF200,ZNF200,ZNF200,ZNF200,ZNF200,ZNF200	-18975,608,608,878,879,878,879
chr1:110081559-110082470	chr1	+	110081607	110082345	True	NM_006496,NM_031936,NM_020703	chr1,chr1,chr1	+,+,-	GNAI3,GPR61,AMIGO1	8840,148,-29271
chr9:139837987-139838293	chr9	+	139837991	139838221	True	NM_000606,NM_018998,NM_178536	chr9,chr9,chr9	+,-,+	C8G,FBXW5,LCN12	1476,1002,8546
chr17:47754935-47755148	chr17	+	47754971	47755167	True	NM_001007226,NM_001007227,NM_001007230,NM_003563,NM_001007228,NM_001007229,NM_007225	chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,-,+	SPOP,SPOP,SPOP,SPOP,SPOP,SPOP,NXPH3	408,408,408,408,408,408,-101724
chrX:151087395-151087903	chrX	+	151087427	151087759	True	NR_029973,NM_002362,NM_001011548,NM_001011549,NM_001011550	chrX,chrX,chrX,chrX,chrX	-,+,+,+,+	MIR452,MAGEA4,MAGEA4,MAGEA4,MAGEA4	40475,-2769,-6117,-2081,-718
chrX:151087395-151087903	chrX	+	151082920	151082982	False	NR_029973,NM_002362,NM_001011548,NM_001011549,NM_001011550	chrX,chrX,chrX,chrX,chrX	-,+,+,+,+	MIR452,MAGEA4,MAGEA4,MAGEA4,MAGEA4	45252,1726,-1610,2414,3777
chrX:151087395-151087903	chrX	+	151084964	151085026	False	NR_029973,NM_002362,NM_001011548,NM_001011549,NM_001011550	chrX,chrX,chrX,chrX,chrX	-,+,+,+,+	MIR452,MAGEA4,MAGEA4,MAGEA4,MAGEA4	43208,-306,-3654,370,1733
chr5:175876498-175877835	chr5	+	175876589	175877537	True	NM_014613,NM_007097	chr5,chr5	+,-	FAF2,CLTB	-1285,-33049
chr11:126041667-126041994	chr11	+	126041681	126042029	True	NM_001144827,NM_024556	chr11,chr11	-,+	RPUSD4,FAM118B	39608,39589
chr4:83823411-83824533	chr4	+	83823632	83824329	True	NM_024672,NR_034075,NR_034076,NR_034077	chr4,chr4,chr4,chr4	+,-,-,-	THAP9,LOC100499177,LOC100499177,LOC100499177	-1847,-1563,-1563,-1563
chr13:31191597-31191869	chr13	+	31191682	31191756	True	NM_005800,NM_002128	chr13,chr13	+,-	USPL1,HMGB1	73,-151601
chr12:6493552-6494058	chr12	+	6493737	6494083	True	NM_002342,NM_001159576,NM_001159575,NM_001038	chr12,chr12,chr12,chr12	+,-,-,-	LTBR,SCNN1A,SCNN1A,SCNN1A	-431,-9347,-7214,-8832
chr19:2902296-2902951	chr19	+	2902475	2902923	True	NM_021217,NM_173480	chr19,chr19	-,+	ZNF77,ZNF57	42096,-1631
chr19:11070177-11070695	chr19	+	11070432	11070504	True	NM_001128844,NM_024029,NM_003072,NM_001128849	chr19,chr19,chr19,chr19	+,-,+,+	SMARCA4,YIPF2,SMARCA4,SMARCA4	1093,-31075,1093,1303
chr11:65796793-65797384	chr11	+	65796792	65797197	True	NM_001323,NM_053054	chr11,chr11	+,-	CST6,CATSPER1	-17389,-2804
chr22:38839713-38840303	chr22	+	38839943	38840327	True	NM_016657,NM_004981	chr22,chr22	+,-	KDELR3,KCNJ4	23755,-2
chr17:76356743-76356945	chr17	+	76356817	76356977	True	NM_003955,NM_024419	chr17,chr17	-,+	SOCS3,PGS1	-659,17757
chr17:40923945-40924240	chr17	+	40923995	40924283	True	NR_024462,NM_032353,NM_032387	chr17,chr17,chr17	-,+,+	LOC100190938,VPS25,WNK4	-10720,1170,8365
chr19:5682388-5684185	chr19	+	5682514	5683549	True	NM_205767,NM_198708,NM_033643,NM_198533,NM_015414,NM_198706,NM_198707,NM_198704,NM_198705	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,+,+,+,+,+,+,+,+	C19orf70,HSD11B1L,RPL36,HSD11B1L,RPL36,HSD11B1L,HSD11B1L,HSD11B1L,HSD11B1L	-1603,-1490,6722,-1518,6796,-1490,-1513,-1530,-1530
chr2:111879533-111879847	chr2	+	111879602	111879784	True	NM_138624,NR_015395,NM_138623,NM_001204106,NM_207003,NM_006538,NM_207002,NM_001204107,NM_001204113,NM_001204112,NM_001204111,NM_001204110,NM_138627,NM_138626,NM_138625,NM_138622,NM_001204108,NM_001204109,NM_138621	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,-,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+	BCL2L11,LOC541471,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11	-1162,372958,-1162,-1162,-1162,-1162,-1162,-1162,-1162,-1162,-1162,-1162,-1162,-1162,-1162,-1162,-1162,-1162,-1162
chr12:112705052-112706769	chr12	+	112705310	112706238	True	NM_001109662,NM_006700	chr12,chr12	-,+	C12orf51,TRAFD1	113720,-142012
chr14:78265425-78265687	chr14	+	78265611	78265699	True	NM_020421,NM_012245,NM_001142545	chr14,chr14,chr14	+,-,+	ADCK1,SNW1,ADCK1	726,-38114,726
chr1:149812299-149812570	chr1	+	149812298	149812594	True	NM_001040874,NM_001005464,NM_003548,NR_036461,NM_001034077,NM_003516,NM_021059	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,+,-,+,-,-	HIST2H2AA4,HIST2H3A,HIST2H4A,HIST2H2BC,HIST2H4B,HIST2H2AA3,HIST2H3C	1774,221,-8128,9796,-8128,1774,221
chr1:149812299-149812570	chr1	-	149824351	149824647	False	NM_001040874,NM_001005464,NM_003548,NR_036461,NM_001034077,NM_003516,NM_021059	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,-,-,+,+	HIST2H2AA4,HIST2H3A,HIST2H4A,HIST2H2BC,HIST2H4B,HIST2H2AA3,HIST2H3C	-1774,-221,8128,-2011,8128,-1774,-221
chr8:82016368-82017246	chr8	+	82016393	82017268	True	NM_001444,NM_018440	chr8,chr8	+,-	FABP5,PAG1	175449,7085
chr11:64071306-64072090	chr11	+	64071391	64072121	True	NM_004451,NM_001039496,NM_016404	chr11,chr11,chr11	+,+,-	ESRRA,C11orf20,TRMT112	922,-3579,12962
chr1:156612504-156613334	chr1	+	156612719	156613202	True	NM_198427,NM_006617,NM_021948	chr1,chr1,chr1	+,-,+	BCAN,NES,BCAN	-1037,34038,-1037
chr2:241630193-241630987	chr2	+	241630285	241631035	True	NM_198998,NM_001102467	chr2,chr2	+,-	AQP12A,AQP12B	226,-7968
chr2:241630193-241630987	chr2	-	241622549	241623298	False	NM_198998,NM_001102467	chr2,chr2	+,-	AQP12A,AQP12B	7963,-232
chr4:186700070-186701328	chr4	+	186700069	186701163	True	NM_001145673,NM_003265	chr4,chr4	-,+	SORBS2,TLR3	-3003,289145
chr5:36284176-36285116	chr5	+	36284275	36285154	True	NM_032637,NM_001161429	chr5,chr5	+,-	SKP2,RANBP3L	-132144,16907
chr5:71616303-71616723	chr5	+	71616307	71616633	True	NM_024754,NM_015084	chr5,chr5	+,-	PTCD2,MRPS27	-158,-223
chr17:72985297-72985840	chr17	+	72985348	72985730	True	NM_014603,NM_030630	chr17,chr17	+,-	CDR2L,C17orf28	-1672,-16448
chr13:79952782-79953159	chr13	+	79952911	79953198	True	NM_001161407,NM_022118	chr13,chr13	+,-	NDFIP2,RBM26	102060,26778
chr17:39577169-39577644	chr17	+	39577267	39577685	True	NM_030975,NM_003770	chr17,chr17	+,-	KRTAP9-9,KRT37	-165682,3187
chr7:126894177-126894897	chr7	+	126894336	126894874	True	NM_001127323,NM_001662	chr7,chr7	-,+	GRM8,ARF5	-1908,333531
chr16:4556946-4557300	chr16	+	4556947	4557175	True	NM_001199054,NM_001127205	chr16,chr16	-,+	C16orf5,HMOX2	31346,-11139
chr2:150444210-150444795	chr2	+	150444289	150444685	True	NM_015702,NM_194317	chr2,chr2	-,+	MMADHC,LYPD6	41,-257311
chr2:216177301-216177675	chr2	+	216177342	216177474	True	NM_002026,NM_004044	chr2,chr2	-,+	FN1,ATIC	123367,-715
chrX:114826708-114827116	chrX	+	114826743	114827132	True	NM_001136025,NM_020871,NM_001172335	chrX,chrX,chrX	+,-,+	PLS3,LRCH2,PLS3	686,-358108,686
chr6:35466175-35467806	chr6	+	35466200	35467794	True	NM_007104,NM_003214	chr6,chr6	+,-	RPL10A,TEAD3	-30073,-1339
chr12:122667162-122667590	chr12	+	122667268	122667534	True	NM_001014336,NM_001098519	chr12,chr12	-,+	IL31,LRRC43	-8522,132
chr2:233496101-233497426	chr2	+	233496789	233497221	True	NM_145702,NM_025202	chr2,chr2	-,+	TIGD1,EFHD1	-81563,985
chr14:96844138-96844545	chr14	+	96844228	96844396	True	NM_018036,NM_016472	chr14,chr14	-,+	ATG2B,C14orf129	-14550,1625
chr17:18953279-18953922	chr17	+	18953550	18953969	True	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	76812,-3214
chr17:18953279-18953922	chr17	-	19027199	19027618	False	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	3163,-76863
chr10:43945789-43946095	chr10	+	43946086	43946149	True	NR_026693,NM_001098204	chr10,chr10	+,-	ZNF487P,HNRNPF	-13563,-41390
chr1:16944128-16944588	chr1	+	16944286	16944635	True	NR_027504,NM_017940	chr1,chr1	+,-	MST1P2,NBPF1	27433,-4304
chr13:32325311-32326914	chr13	+	32325500	32326756	True	NM_130806,NM_001136571	chr13,chr13	+,-	RXFP2,ZAR1L	-11872,559386
chr17:73633111-73633570	chr17	+	73633183	73633529	True	NR_028439,NM_001162997,NM_001162995,NM_004259	chr17,chr17,chr17,chr17	+,+,+,-	LOC643008,LOC100130933,LOC643008,RECQL5	-559,9116,-3720,29786
chr4:9495493-9495790	chr4	+	9495563	9495685	True	NR_031688,NM_001040448	chr4,chr4	-,+	MIR548I2,DEFB131	62302,-49354
chr4:9495493-9495790	chr4	+	8961591	8961655	False	NM_018942,NM_001040071	chr4,chr4	-,+	HMX1,LOC650293	-88048,-10165
chr1:233463835-233464077	chr1	+	233463896	233464016	True	NM_032435,NM_014801	chr1,chr1	+,-	KIAA1804,PCNXL2	-433,-32437
chr2:2320882-2322871	chr2	+	2320931	2322786	True	NR_024468,NM_015025	chr2,chr2	+,-	LOC730811,MYT1L	217,12321
chr1:109397957-109398330	chr1	+	109398039	109398103	True	NM_152763,NR_034168	chr1,chr1	-,+	AKNAD1,LOC642864	1667,1735
chr7:77427772-77428044	chr7	+	77427838	77427979	True	NM_032936,NM_001127360,NM_001127358	chr7,chr7,chr7	-,+,+	TMEM60,PHTF2,PHTF2	-91,129,129
chr17:27532333-27533341	chr17	+	27532385	27533005	True	NM_203318,NM_005208	chr17,chr17	-,+	MYO18A,CRYBA1	-24978,40869
chr8:124252154-124252690	chr8	+	124252394	124252686	True	NM_032847,NM_207006	chr8,chr8	-,+	C8orf76,FAM83A	1002,-57693
chr6:74233454-74234203	chr6	+	74233630	74234208	True	NM_001402,NM_133645	chr6,chr6	-,+	EEF1A1,MTO1	-2875,-62227
chr19:36398455-36398818	chr19	+	36398721	36398867	True	NM_001007469,NM_003332,NM_001173514,NM_001173515,NR_033390,NM_198125,NM_139239,NM_014266	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,-,-,-,-,-,+	HCST,TYROBP,TYROBP,TYROBP,TYROBP,TYROBP,NFKBID,HCST	-5390,394,394,394,394,394,-7169,-5390
chr22:25389902-25391108	chr22	+	25390070	25390812	True	NM_001001663,NM_001145206	chr22,chr22	-,+	TMEM211,KIAA1671	-54756,33128
chrX:25036084-25037497	chrX	+	25036120	25037509	True	NM_139058,NR_003007	chrX,chrX	-,+	ARX,SCARNA23	-2055,-273615
chr22:20254909-20255251	chr22	+	20254988	20255172	True	NM_023004,NR_026919	chr22,chr22	-,+	RTN4R,LOC150197	694,-61184
chr17:61096420-61097378	chr17	+	61096503	61097250	True	NM_152598,NM_025185	chr17,chr17	-,+	MARCH10,TANC2	-210798,-9667
chr1:33722680-33722941	chr1	+	33722698	33722830	True	NM_018207,NM_152493	chr1,chr1	-,+	TRIM62,ZNF362	-75027,-576
chr12:4210391-4212029	chr12	+	4210637	4212079	True	NM_001759,NM_020367	chr12,chr12	+,-	CCND2,PARP11	170822,-228029
chr20:62716483-62717247	chr20	+	62716600	62717246	True	NM_182647,NM_001007125,NM_001039467,NM_001200019,NM_000913,NM_005873	chr20,chr20,chr20,chr20,chr20,chr20	+,-,-,+,+,-	OPRL1,C20orf201,RGS19,OPRL1,OPRL1,RGS19	-5180,-888,-5276,-282,-5180,-5755
chr6:89790756-89790972	chr6	+	89790865	89790987	True	NM_006813,NM_080743	chr6,chr6	+,-	PNRC1,SRSF12	-487,36863
chr1:150663298-150663679	chr1	+	150663302	150663503	True	NM_018178,NR_036211	chr1,chr1	-,+	GOLPH3L,MIR4257	6226,-138953
chr3:45642275-45643093	chr3	+	45642615	45643095	True	NM_014240,NR_033947	chr3,chr3	+,-	LIMD1,LOC644714	-6343,87329
chrY:9172472-9172938	chrY	+	9172504	9172594	True	NR_001546,NM_001164471	chrY,chrY	-,+	TTTY20,TSPY4	-63,22857
chr7:92071824-92072962	chr7	+	92071830	92072861	True	NM_000466,NM_021167	chr7,chr7	-,+	PEX1,GATAD1	85034,3903
chr1:2938342-2938945	chr1	+	2938374	2938944	True	NM_080431,NR_015440	chr1,chr1	+,-	ACTRT2,FLJ42875	-379,45395
chr11:60044287-60045688	chr11	+	60044813	60045677	True	NM_148975,NM_024021,NM_022349	chr11,chr11,chr11	+,+,-	MS4A4A,MS4A4A,MS4A6A	2461,4408,-94139
chrX:119008610-119009333	chrX	+	119008959	119009282	True	NM_006978,NM_004541	chrX,chrX	-,+	RNF113A,NDUFA1	-3168,-3284
chr9:141045289-141046297	chr10	-	119089	119144	True	NM_001164154,NM_006624	chr10,chr10	-,+	TUBB8,ZMYND11	-23585,61260
chr12:51662158-51662396	chr12	+	51662225	51662349	True	NM_001136269,NM_001031628,NM_001033873	chr12,chr12,chr12	+,-,-	DAZAP2,SMAGP,SMAGP	-29775,1909,1701
chr19:18698540-18698823	chr19	+	18698551	18698817	True	NM_004750,NM_001100419,NM_001100418	chr19,chr19,chr19	-,+,+	CRLF1,C19orf60,C19orf60	18893,677,677
chr19:29375092-29376601	chr19	+	29375784	29376546	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	79491,327640
chr5:171882849-171883584	chr5	+	171882904	171883518	True	NM_001017995,NM_001142651	chr5,chr5	-,+	SH3PXD2B,NEURL1B	-1377,184757
chr2:99803044-99804004	chr2	+	99803069	99803956	True	NM_145212,NR_028356,NM_138798	chr2,chr2,chr2	+,+,-	MRPL30,MRPL30,MITD1	-5584,-5584,-5577
chr9:31253549-31254389	chr9	+	31253565	31254197	True	NM_014314,NM_002197	chr9,chr9	-,+	DDX58,ACO1	1272175,1130403
chr2:210470501-210472317	chr2	+	210470531	210472057	True	NM_152519,NM_031847	chr2,chr2	-,+	C2orf67,MAP2	564057,-26189
chr3:53925066-53925585	chr3	+	53925191	53925510	True	NM_022899,NM_018725,NM_021237	chr3,chr3,chr3	-,+,-	ACTR8,IL17RB,SELK	-8962,-44667,530
chr4:572482-572730	chr4	+	572560	572718	True	NM_000283,NM_133474	chr4,chr4	+,-	PDE6B,ZNF721	46644,-79118
chr1:86592245-86592801	chr1	+	86592700	86592808	True	NM_152890,NM_006536	chr1,chr1	-,+	COL24A1,CLCA2	29369,296960
chrX:106361004-106361664	chrX	+	106361063	106361594	True	NM_018301,NM_001169154,NM_001171080	chrX,chrX,chrX	-,+,-	RBM41,CXorf41,RBM41	513,88267,513
chr12:123920787-123921033	chr12	+	123920802	123921066	True	NM_145058,NM_022717	chr12,chr12	-,+	RILPL2,SNRNP35	248,21584
chr6:36168182-36168665	chr6	+	36168215	36168693	True	NM_001010903,NM_015695	chr6,chr6	-,+	C6orf222,BRPF3	136019,-3716
chr12:51741547-51742252	chr12	+	51741842	51742192	True	NM_001971,NM_004858	chr12,chr12	-,+	CELA1,SLC4A8	-1379,76401
chr1:20880940-20882710	chr1	+	20881052	20882528	True	NM_024544,NM_207334	chr1,chr1	-,+	MUL1,FAM43B	-46378,-2171
chr19:7744797-7745611	chr19	+	7744937	7745507	True	NM_002002,NM_174894,NM_001042462,NM_001042461,NM_174918	chr19,chr19,chr19,chr19,chr19	-,+,+,+,+	FCER2,TRAPPC5,TRAPPC5,TRAPPC5,C19orf59	21575,253,199,256,-3045
chr11:85472519-85472945	chr11	+	85472523	85472727	True	NM_001162953,NM_001162951,NM_173556	chr11,chr11,chr11	-,-,+	SYTL2,SYTL2,CCDC83	-3479,-3479,93416
chr11:67275233-67275436	chr11	+	67275237	67275443	True	NM_003977,NM_005851,NM_004910,NM_001130848	chr11,chr11,chr11,chr11	+,-,-,-	AIP,CDK2AP2,PITPNM1,PITPNM1	-24783,709,-2394,-2394
chrX:47005011-47006069	chrX	+	47005137	47006047	True	NR_024235,NR_024234,NM_019056,NM_001135998,NM_005676,NM_001204467,NM_001204466,NM_152856,NM_001204468	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,+,+,+,+,+	NDUFB11,NDUFB11,NDUFB11,NDUFB11,RBM10,RBM10,RBM10,RBM10,RBM10	-528,-528,-1042,-1042,-571,-571,-571,-571,-571
chr11:4791094-4792105	chr11	+	4791096	4792151	True	NM_001004753,NM_001004752	chr11,chr11	+,-	OR51F2,OR51F1	50464,-7
chr1:9008933-9010336	chr1	+	9009129	9010385	True	NM_001215,NM_001428	chr1,chr1	+,-	CA6,ENO1	-3258,-69978
chr2:54954198-54954697	chr2	+	54954201	54954725	True	NM_001039753,NM_007008	chr2,chr2	+,-	EML6,RTN4	-2103,282799
chr13:52767436-52768300	chr13	+	52767458	52768301	True	NR_002816,NM_021645	chr13,chr13	-,+	THSD1P1,UTP14C	354,-168683
chr9:14905743-14906324	chr9	+	14905933	14906355	True	NR_003920,NM_144966	chr9,chr9	+,-	LOC389705,FREM1	86969,4688
chr17:38087671-38088676	chr17	+	38087759	38088525	True	NM_139280,NM_001195545	chr17,chr17	-,+	ORMDL3,LOC100505591	-3875,9201
chr22:41763354-41763780	chr22	+	41763535	41763807	True	NM_001145398,NM_016272	chr22,chr22	+,-	TEF,TOB2	-194,79270
chr2:130969361-130970747	chr2	+	130969377	130970450	True	NM_025029,NM_207312	chr2,chr2	+,-	MZT2B,TUBA3E	-29934,-13343
chr2:130969361-130970747	chr2	-	132219182	132219232	False	NR_002826,NM_080386	chr2,chr2	-,+	LOC401010,TUBA3D	-16715,14433
chr21:46964088-46964591	chr21	+	46964267	46964525	True	NM_130444,NM_194255,NM_001205206,NM_001205207	chr21,chr21,chr21,chr21	+,-,-,-	COL18A1,SLC19A1,SLC19A1,SLC19A1	-88894,-1882,-1882,-9725
chr2:183581265-183581574	chr2	+	183581297	183581569	True	NM_018981,NM_001463	chr2,chr2	+,-	DNAJC10,FRZB	-349,149979
chr2:98205973-98206370	chr2	+	98205996	98206304	True	NM_025190,NM_001862	chr2,chr2	-,+	ANKRD36B,COX5B	174,56216
chr2:98205973-98206370	chr2	-	97779612	97779664	False	NM_199336,NM_001164315	chr2,chr2	-,+	FAHD2B,ANKRD36	-19030,-432
chr18:47095154-47095870	chr18	+	47095230	47095916	True	NM_001035006,NM_006033	chr18,chr18	-,+	RPL17,LIPG	-76295,-6854
chr1:4467467-4468836	chr1	+	4467849	4468883	True	NR_027088,NM_207356	chr1,chr1	+,-	LOC284661,C1orf174	3227,-650992
chr9:109939876-109940447	chr9	+	109940118	109940477	True	NM_002874,NR_031752	chr9,chr9	+,-	RAD23B,MIR548Q	105066,-91402
chr15:31197395-31197600	chr15	+	31197398	31197619	True	NM_017762,NM_014967,NM_001146095,NM_001146094,NM_001146096	chr15,chr15,chr15,chr15,chr15	-,+,+,+,+	MTMR10,FAN1,FAN1,FAN1,FAN1	86239,-1380,-1401,-1380,-1380
chr22:36425708-36427281	chr22	+	36425733	36427071	True	NM_001082579,NM_001082578,NM_001136540	chr22,chr22,chr22	-,-,+	RBFOX2,RBFOX2,APOL1	-1148,-1148,222045
chr7:137680372-137681237	chr7	+	137680381	137681234	True	NM_194071,NM_001190906	chr7,chr7	-,+	CREB3L2,AKR1D1	5663,79943
chr16:89557977-89558247	chr16	+	89558008	89558169	True	NM_199367,NM_013275	chr16,chr16	+,-	SPG7,ANKRD11	16635,-1039
chr20:43849728-43851112	chr20	+	43849740	43851159	True	NM_003064,NM_003008	chr20,chr20	-,+	SLPI,SEMG2	32098,-187
chr12:6947723-6948206	chr12	+	6947853	6948223	True	NM_002075,NM_031299	chr12,chr12	+,-	GNB3,CDCA3	1151,12283
chr14:89880891-89882444	chr14	+	89881203	89882331	True	NR_036500,NM_005197	chr14,chr14	+,-	LOC400236,FOXN3	1366,1174
chr4:86940353-86941668	chr4	+	86940353	86941676	True	NM_031305,NM_138981	chr4,chr4	+,-	ARHGAP24,MAPK10	-88982,87187
chr15:56298963-56299390	chr15	+	56298982	56299392	True	NM_198524,NM_006154	chr15,chr15	+,-	TEX9,NEDD4	358251,-13147
chr11:2481963-2482221	chr11	+	2481967	2482159	True	NM_181798,NM_014555	chr11,chr11	+,-	KCNQ1,TRPM5	524,-37692
chr3:39399688-39401436	chr3	+	39400071	39401311	True	NM_001171174,NM_017875	chr3,chr3	-,+	CX3CR1,SLC25A38	-76845,23503
chr12:54369394-54370340	chr12	+	54369421	54370116	True	NM_014212,NR_003716,NM_017409	chr12,chr12,chr12	+,-,+	HOXC11,HOTAIR,HOXC10	-2562,-6906,8829
chr4:81106644-81107225	chr4	+	81106748	81107248	True	NM_020226,NM_001145794	chr4,chr4	+,-	PRDM8,ANTXR2	-375,-112271
chr2:177014553-177014994	chr2	+	177014567	177014944	True	NR_033979,NM_014621,NR_029609	chr2,chr2,chr2	-,+,+	LOC401022,HOXD4,MIR10B	38792,1168,86
chr16:30110499-30110905	chr16	+	30110738	30110952	True	NR_027081,NM_004608,NM_001145524,NM_031477	chr16,chr16,chr16,chr16	+,-,-,-	LOC100271831,TBX6,YPEL3,YPEL3	14480,-7533,-3201,-3217
chr1:51781143-51781853	chr1	+	51781381	51781833	True	NM_001080494,NM_014372	chr1,chr1	-,+	TTC39A,RNF11	6155,-79487
chr3:36969041-36970900	chr3	+	36969050	36970065	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	16542,64775
chr16:19896464-19896664	chr16	+	19896614	19896692	True	NM_153208,NM_016235	chr16,chr16	+,-	IQCK,GPRC5B	-168887,-463
chr20:19999183-20000436	chr20	+	19999212	20000115	True	NM_181527,NM_181528,NM_016100,NM_016652	chr20,chr20,chr20,chr20	+,+,+,-	NAA20,NAA20,NAA20,CRNKL1	-720,-1326,-1326,36633
chr9:3527432-3528816	chr9	+	3527437	3528634	True	NM_134428,NM_002919,NR_026663	chr9,chr9,chr9	-,-,+	RFX3,RFX3,C9orf70	-1454,-1454,370011
chr2:97310141-97310355	chr2	+	97310273	97310371	True	NM_017991,NM_001113382,NM_001115016	chr2,chr2,chr2	-,+,-	KIAA1310,FER1L5,KIAA1310	-6158,-1751,-6158
chr1:165514011-165514924	chr1	+	165514097	165514879	True	NM_001005214,NR_026744	chr1,chr1	+,-	LRRC52,LOC400794	-671,36512
chr14:104552412-104552909	chr14	+	104552537	104552865	True	NM_004894,NM_001080464	chr14,chr14	-,+	C14orf2,ASPG	-164634,-565
chr12:51985755-51986082	chr12	+	51985763	51986111	True	NM_014191,NM_007210	chr12,chr12	+,-	SCN8A,GALNT6	-794,-200563
chr17:18010563-18011511	chr17	+	18010677	18011351	True	NM_016239,NM_145691	chr17,chr17	+,-	MYO15A,ATPAF2	668,-68197
chr6:43610056-43610634	chr6	+	43610229	43610581	True	NM_014628,NM_152732,NM_019096,NM_001193341	chr6,chr6,chr6,chr6	+,+,-,+	MAD2L1BP,RSPH9,GTPBP2,RSPH9	-6711,2185,-13293,2185
chr1:36023565-36023890	chr1	+	36023584	36023926	True	NM_014284,NM_001014839,NM_001014841,NM_024874	chr1,chr1,chr1,chr1	+,+,+,-	NCDN,NCDN,NCDN,KIAA0319L	-242,-242,-242,-547
chr1:160310660-160312418	chr1	+	160310754	160312450	True	NM_004371,NM_015331,NM_001098398	chr1,chr1,chr1	-,+,-	COPA,NCSTN,COPA	954,612,954
chr19:3136977-3138118	chr19	+	3136985	3137373	True	NM_198969,NM_002068	chr19,chr19	-,+	AES,GNA15	-74021,-845
chr10:91403745-91404211	chr10	+	91403784	91404154	True	NM_148977,NM_148978,NM_138316,NM_016195	chr10,chr10,chr10,chr10	-,-,-,+	PANK1,PANK1,PANK1,KIF20B	1111,-137,-137,57212
chr17:15375100-15376702	chr17	+	15375302	15376668	True	NM_001204477,NM_001130842	chr17,chr17	-,+	CDRT4,ZNF286A	-4377,226222
chr3:57311516-57312676	chr3	+	57311518	57312696	True	NM_012096,NM_130387	chr3,chr3	+,-	APPL1,ASB14	-49812,334
chr6:129225690-129226604	chr6	+	129225904	129226651	True	NM_001135648,NM_001079823	chr6,chr6	-,+	PTPRK,LAMA2	-384034,-21671
chr13:41708809-41710718	chr13	+	41709101	41710538	True	NM_007187,NM_152903	chr13,chr13	+,-	WBP4,KBTBD6	-73455,-2165
chr5:76117495-76118909	chr5	+	76117786	76118719	True	NM_005242,NM_004101	chr5,chr5	+,-	F2RL1,F2RL2	-3009,-198546
chr8:38836607-38837120	chr8	+	38836629	38837139	True	NM_001024380,NM_153692	chr8,chr8	-,+	TM2D2,HTRA4	16952,-5013
chr10:690532-690981	chr10	+	690598	690974	True	NR_027152,NR_027151,NM_014974	chr10,chr10,chr10	+,+,-	C10orf108,C10orf108,DIP2C	5042,4913,44684
chr15:81953643-81954358	chr15	+	81953672	81954318	True	NM_001080532,NM_004513	chr15,chr15	-,+	TMC3,IL16	-287254,-364471
chr15:81953643-81954358	chr15	+	81999916	82000188	False	NM_001080532,NM_004513	chr15,chr15	-,+	TMC3,IL16	-333498,-410713
chr1:48279409-48280379	chr1	+	48279470	48280394	True	NM_001194986,NM_004474	chr1,chr1	-,+	LOC388630,FOXD2	182218,-377832
chr9:139335439-139335876	chr9	+	139335497	139335927	True	NM_019892,NM_015160	chr9,chr9	-,+	INPP5E,PMPCA	-1241,-30432
chr4:78081974-78082346	chr4	+	78082033	78082177	True	NM_004354,NM_006835	chr4,chr4	+,-	CCNG2,CCNI	-3735,-84908
chr15:45004002-45004265	chr15	+	45004043	45004235	True	NM_004048,NM_001145112	chr15,chr15	+,-	B2M,PATL2	-409,-34957
chr12:5239324-5240054	chr12	+	5239366	5239989	True	NM_006422,NM_002234	chr12,chr12	-,+	AKAP3,KCNA5	-485023,-86332
chr16:30120916-30121477	chr16	+	30121174	30121486	True	NR_027081,NM_024307	chr16,chr16	+,-	LOC100271831,GDPD3	3946,3446
chr14:91315704-91317054	chr14	+	91315823	91317102	True	NM_001010854,NM_001102366	chr14,chr14	-,+	TTC7B,C14orf159	-33062,263254
chr4:48833204-48833412	chr4	+	48833219	48833407	True	NM_001079842,NM_001079841,NM_001079840,NM_015030,NM_001168254,NM_001079839,NM_017830	chr4,chr4,chr4,chr4,chr4,chr4,chr4	+,+,+,-,+,+,+	OCIAD1,OCIAD1,OCIAD1,FRYL,OCIAD1,OCIAD1,OCIAD1	-26,-210,-210,-50903,-41,-26,-210
chr1:40781529-40781762	chr1	+	40781556	40781810	True	NM_022733,NM_001852	chr1,chr1	+,-	SMAP2,COL9A2	57567,1179
chrX:138778673-138780153	chrX	+	138778945	138779843	True	NM_001099855,NM_000133	chrX,chrX	-,+	MCF2,F9	10588,-166109
chr17:40075470-40076210	chr17	+	40075636	40076175	True	NM_031421,NM_198830,NM_001096	chr17,chr17,chr17	+,-,-	TTC25,ACLY,ACLY	10712,-364,-364
chr21:44749899-44750615	chr21	+	44749993	44750633	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	119270,96419
chr22:19130254-19130572	chr22	+	19130271	19130435	True	NM_005315,NM_053006,NM_022719	chr22,chr22,chr22	-,+,-	GSC2,TSSK2,DGCR14	7411,-12001,1805
chr2:161052548-161053120	chr2	+	161052707	161053152	True	NM_000888,NM_022826	chr2,chr2	-,+	ITGB6,MARCH7	3493,-483748
chr12:58138331-58139068	chr12	+	58138347	58139010	True	NM_005981,NM_001122772,NM_014770,NM_138396,NM_000075	chr12,chr12,chr12,chr12,chr12	+,-,-,+,-	TSPAN31,AGAP2,AGAP2,MARCH9,CDK4	-9,-6318,-2407,9889,7204
chr6:36240492-36241087	chr6	+	36240566	36240764	True	NM_001145717,NM_001010903	chr6,chr6	+,-	PNPLA1,C6orf222	-2385,63950
chr7:56184215-56184676	chr7	+	56184239	56184579	True	NM_015411,NM_001145712	chr7,chr7	+,-	SUMF2,LOC389493	-52373,-149
chr6:26422072-26422375	chr6	+	26422119	26422201	True	NR_027795,NM_003543	chr6,chr6	+,-	BTN2A3,HIST1H4H	-554,-136392
chr6:26422072-26422375	chr6	+	26458637	26458690	False	NM_001197233,NM_001197234,NM_078476,NM_003543,NM_007049	chr6,chr6,chr6,chr6,chr6	+,+,+,-,+	BTN2A1,BTN2A1,BTN2A1,HIST1H4H,BTN2A1	-513,-538,-538,-172910,-538
chr6:24122242-24122492	chr6	+	24122244	24122530	True	NM_016356,NM_080723	chr6,chr6	-,+	DCDC2,NRSN1	235800,3883
chr16:279485-279927	chr16	+	279539	279737	True	NM_201412,NM_018032,NM_032039	chr16,chr16,chr16	-,-,+	LUC7L,LUC7L,ITFG3	-90,-90,5063
chr11:118216596-118218492	chr11	+	118216775	118218334	True	NM_000073,NM_001040651,NM_000732	chr11,chr11,chr11	+,-,-	CD3G,CD3D,CD3D	-1767,-3316,-3316
chr7:6687895-6688123	chr7	+	6687917	6688127	True	NM_017560,NM_006956	chr7,chr7	+,-	ZNF853,ZNF12	-32441,58489
chr17:18681488-18681934	chr17	+	18681603	18681911	True	NM_016078,NM_001145045	chr17,chr17	+,-	FAM18B1,ZNF286B	2670,-96031
chr17:18681488-18681934	chr17	-	15469546	15469854	False	NM_145301,NM_001135036,NR_037924,NM_001204478,NM_001130842	chr17,chr17,chr17,chr17,chr17	-,-,-,-,+	FAM18B2,FAM18B2,FAM18B2-CDRT4,FAM18B2-CDRT4,ZNF286A	-2601,-2601,-2601,-2601,133036
chr6:26423765-26424891	chr6	+	26423772	26424734	True	NR_027795,NM_003543	chr6,chr6	+,-	BTN2A3,HIST1H4H	-2204,-138045
chr17:26695467-26695914	chr17	+	26695495	26695935	True	NM_001080837,NM_000638,NM_015077	chr17,chr17,chr17	-,-,+	SEBOX,VTN,SARM1	-3230,1488,3051
chr4:87810222-87811067	chr4	+	87810566	87811048	True	NM_144645,NM_001166693	chr4,chr4	-,+	C4orf36,AFF1	2577,45105
chr3:111505564-111506611	chr3	+	111505729	111506431	True	NM_024508,NM_001134437	chr3,chr3	-,+	ZBED2,PHLDB2	-191563,-54460
chr3:139259171-139260536	chr3	+	139259375	139260465	True	NM_001130992,NM_020191,NM_001130993,NM_002899	chr3,chr3,chr3,chr3	-,+,-,-	RBP1,MRPS22,RBP1,RBP1	-704,-196572,-704,-704
chr7:112571230-112572139	chr7	+	112571231	112571856	True	NM_152556,NM_182597	chr7,chr7	-,+	C7orf60,C7orf53	8135,-450217
chr7:66366769-66366975	chr7	+	66366774	66367024	True	NR_003934,NM_017994	chr7,chr7	-,+	LOC729156,C7orf42	-56961,19178
chr15:57536955-57537415	chr15	+	57536995	57537425	True	NM_207040,NR_015419	chr15,chr15	+,-	TCF12,LOC145783	-25400,-326298
chr3:39103118-39104634	chr3	+	39103934	39104677	True	NM_020839,NM_031899	chr3,chr3	+,-	WDR48,GORASP1	-10478,44503
chr11:74660154-74660452	chr11	+	74660200	74660480	True	NM_014752,NM_182969	chr11,chr11	+,-	SPCS2,XRRA1	15,6
chr20:3064927-3066280	chr20	+	3064950	3066268	True	NM_000490,NM_000915	chr20,chr20	-,+	AVP,OXT	-18,-12735
chr16:29375152-29376516	chr16	+	29375716	29376351	True	NR_002939,NM_001031827	chr16,chr16	+,-	RUNDC2C,BOLA2	-73227,89984
chr16:29375152-29376516	chr16	+	21396590	21397224	False	NR_026675,NM_130464	chr16,chr16	+,-	NCRNA00169,NPIPL3	-84472,39484
chr8:21912014-21912393	chr8	+	21912027	21912439	True	NM_001978,NM_024815,NM_001114135,NM_001114137,NM_001114136,NM_001114139,NM_001114138	chr8,chr8,chr8,chr8,chr8,chr8,chr8	+,-,+,+,+,+,+	EPB49,NUDT18,EPB49,EPB49,EPB49,EPB49,EPB49	4246,54543,2936,-997,-112,-112,4246
chr3:160236367-160237302	chr3	+	160236682	160237174	True	NR_029525,NR_003001	chr3,chr3	+,-	MIR16-2,SCARNA7	-114217,-3658
chr15:69369766-69370446	chr15	+	69370021	69370483	True	NR_026949,NM_006305	chr15,chr15	+,-	NCRNA00277,ANP32A	2706,-256760
chr20:54578457-54578675	chr20	+	54578462	54578668	True	NM_080617,NM_019888	chr20,chr20	-,+	CBLN4,MC3R	1394,245119
chr11:59617254-59617866	chr11	+	59617462	59617910	True	NM_004177,NM_005142	chr11,chr11	+,-	STX3,GIF	-94981,-4488
chrX:153235840-153236206	chrX	+	153236063	153236171	True	NM_005334,NM_003492	chrX,chrX	-,+	HCFC1,TMEM187	698,1819
chr10:70317929-70319299	chr10	+	70317997	70319345	True	NM_030625,NM_152707	chr10,chr10	+,-	TET1,SLC25A16	771,-30717
chr17:43043428-43043976	chr17	+	43043578	43043992	True	NM_213607,NM_006688	chr17,chr17	+,-	CCDC103,C1QL1	-66475,1702
chr8:17019290-17020257	chr8	+	17019553	17020257	True	NM_013354,NM_016353	chr8,chr8	-,+	CNOT7,ZDHHC2	84180,-5772
chr6:11779838-11781085	chr6	+	11779972	11780839	True	NM_001143948,NM_032744,NM_002114	chr6,chr6,chr6	-,-,+	C6orf105,C6orf105,HIVEP1	-692,-692,231884
chr18:77710215-77710647	chr18	+	77710366	77710588	True	NM_001136180,NM_001146343,NM_001146345,NM_025078	chr18,chr18,chr18,chr18	+,-,-,-	HSBP1L1,PQLC1,PQLC1,PQLC1	13993,1115,1115,1115
chr19:55279426-55281291	chr19	+	55279743	55281141	True	NM_014218,NM_001127255	chr19,chr19	+,-	KIR2DL1,NLRP7	123,177782
chr15:80217620-80218422	chr15	+	80217766	80218278	True	NR_028330,NR_037653,NR_037652,NM_001100880,NM_001199757,NM_001199760	chr15,chr15,chr15,chr15,chr15,chr15	+,-,-,-,-,-	C15orf37,ST20,ST20,ST20,ST20,ST20-MTHFS	-2704,-1670,-1670,-2102,-2102,-2318
chr4:76556076-76557867	chr4	+	76556130	76557556	True	NM_003948,NM_178497	chr4,chr4	-,+	CDKL2,C4orf26	-409,-74923
chr14:41181698-41182114	chr14	+	41181773	41181933	True	NM_152447,NM_203301	chr14,chr14	+,-	LRFN5,FBXO33	894830,-1280069
chr4:83956792-83957281	chr4	+	83956920	83957207	True	NM_016129,NM_001115007	chr4,chr4	+,-	COPS4,LIN54	-732,-22880
chr1:162378244-162379973	chr1	+	162378524	162379944	True	NM_001085375,NM_053282	chr1,chr1	+,-	C1orf226,SH2D1B	-27055,2034
chr11:69487868-69488169	chr11	+	69487867	69488201	True	NM_053056,NM_153451	chr11,chr11	+,-	CCND1,ORAOV1	-32055,2014
chr12:65154265-65154842	chr12	+	65154398	65154882	True	NM_002076,NM_015279	chr12,chr12	-,+	GNS,TBC1D30	-1172,63469
chr7:99516957-99517163	chr7	+	99517100	99517166	True	NM_033091,NM_033017,NR_036679	chr7,chr7,chr7	-,-,+	TRIM4,TRIM4,AZGP1P1	107,107,61218
chr14:75235243-75235869	chr14	+	75235391	75235743	True	NM_019589,NM_001039479	chr14,chr14	+,-	YLPM1,KIAA0317	-5383,-55584
chr16:70474191-70474697	chr16	+	70474198	70474272	True	NM_145059,NM_006927	chr16,chr16	+,-	FUK,ST3GAL2	14225,-1207
chr1:24469109-24469392	chr1	+	24469157	24469405	True	NM_021258,NR_027087	chr1,chr1	-,+	IL22RA1,LOC284632	420,57324
chr2:218995065-218996283	chr2	+	218995237	218996185	True	NM_000634,NM_001557,NM_001168298	chr2,chr2,chr2	-,+,+	CXCR1,CXCR2,CXCR2	35590,-4553,-5276
chr7:25222302-25222921	chr7	+	25222378	25222720	True	NM_138811,NM_016447	chr7,chr7	-,+	C7orf31,MPP6	-2561,-609350
chr8:136471089-136472642	chr8	+	136471122	136472662	True	NR_029599,NM_006558	chr8,chr8	-,+	MIR30D,KHDRBS3	-653934,-1457
chr15:70127746-70128343	chr15	+	70127777	70128223	True	NR_026764,NR_030714	chr15,chr15	+,-	C15orf50,MIR629	-255,243634
chr1:33545551-33546149	chr1	+	33545819	33546187	True	NR_037592,NM_052998	chr1,chr1	-,+	AK2,ADC	-43307,526
chr10:115613960-115614434	chr10	+	115613972	115614483	True	NM_198514,NM_014881	chr10,chr10	+,-	NHLRC2,DCLRE1A	20,-113
chr1:50888330-50888795	chr1	+	50888473	50888791	True	NM_021952,NM_032110	chr1,chr1	+,-	ELAVL4,DMRTA2	-313930,400
chr9:98908545-98908980	chr9	+	98908623	98909023	True	NR_033838,NR_024129	chr9,chr9	+,-	LOC158435,NCRNA00092	-80560,-124586
chr12:108956836-108957439	chr12	+	108956929	108957360	True	NM_213595,NM_014301,NM_014706	chr12,chr12,chr12	+,+,-	ISCU,ISCU,SART3	-686,-686,-1764
chr11:57193045-57194071	chr11	+	57193219	57194012	True	NM_199329,NM_014096,NM_178570,NM_017611	chr11,chr11,chr11,chr11	-,-,+,-	SLC43A3,SLC43A3,RTN4RL2,SLC43A3	633,562,34326,1092
chr17:38925706-38927027	chr17	+	38925972	38926712	True	NM_181539,NM_001195387	chr17,chr17	-,+	KRT26,TMEM99	1749,48631
chr11:62573290-62575009	chr11	+	62573312	62574750	True	NM_199337,NM_006362,NM_001081491	chr11,chr11,chr11	+,-,-	TMEM179B,NXF1,NXF1	-18489,-348,-348
chr7:1096420-1096668	chr7	+	1096425	1096585	True	NM_138445,NR_029898	chr7,chr7	+,-	GPR146,MIR339	555,-33763
chr6:26021423-26022002	chr6	+	26021655	26021998	True	NM_005325,NM_003544,NM_003529,NM_003538	chr6,chr6,chr6,chr6	-,-,+,+	HIST1H1A,HIST1H4B,HIST1H3A,HIST1H4A	-3615,5532,-988,4
chr1:32720406-32720785	chr1	+	32720674	32720822	True	NM_032648,NR_026850,NM_005356	chr1,chr1,chr1	+,-,+	FAM167B,MTMR9LP,LCK	-7910,-13363,-3888
chr9:74522728-74523162	chr9	+	74522804	74522976	True	NM_001025780,NM_182505,NM_016014	chr9,chr9,chr9	-,+,-	FAM108B1,C9orf85,FAM108B1	3230,3446,3230
chr11:67194038-67195165	chr11	+	67194155	67194900	True	NM_005608,NM_003952	chr11,chr11	-,+	PTPRCAP,RPS6KB2	10303,1034
chr3:29323074-29323431	chr3	+	29323124	29323479	True	NM_014483,NM_001003793,NM_001003792,NM_001177712,NM_001134433,NM_001177711	chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,-,+	RBMS3,RBMS3,RBMS3,RBMS3,AZI2,RBMS3	-372,-372,-372,-372,-932506,-372
chr4:186734968-186735859	chr4	+	186734985	186735799	True	NM_001145670,NM_001145671,NM_001145672,NM_003603,NM_003265	chr4,chr4,chr4,chr4,chr4	-,-,-,-,+	SORBS2,SORBS2,SORBS2,SORBS2,TLR3	-1575,-2760,-2937,-1593,254509
chr10:119832046-119833782	chr10	+	119832072	119833536	True	NM_014904,NR_026940	chr10,chr10	-,+	RAB11FIP2,CASC2	-25958,-25804
chr20:31819306-31820325	chr20	+	31819511	31820374	True	NM_016583,NM_016082,NM_130852	chr20,chr20,chr20	+,-,+	PLUNC,CDK5RAP1,PLUNC	3427,169013,3427
chr12:94071385-94071652	chr12	+	94071436	94071664	True	NM_003348,NM_003805	chr12,chr12	-,+	UBE2N,CRADD	-235410,-336
chrX:85338652-85338997	chrX	+	85338853	85339037	True	NM_001145414,NM_001139514	chrX,chrX	-,+	CHM,DACH2	-36287,64417
chr11:62537231-62537803	chr11	+	62537246	62537701	True	NM_002696,NM_006473,NM_024784	chr11,chr11,chr11	+,+,-	POLR2G,TAF6L,ZBTB3	-8286,1173,-15590
chrX:16731328-16733087	chrX	+	16731816	16732644	True	NM_032796,NM_019857,NM_175859,NR_033181,NM_001144002	chrX,chrX,chrX,chrX,chrX	+,-,-,+,-	SYAP1,CTPS2,CTPS2,SYAP1,CTPS2	5062,-757,-1041,5062,-1476
chr11:102190070-102190685	chr11	+	102190140	102190558	True	NM_001165,NM_052932,NM_182962	chr11,chr11,chr11	+,-,+	BIRC3,TMEM123,BIRC3	-1997,133267,-1997
chr1:40419327-40419670	chr1	+	40419331	40419695	True	NM_005376,NM_001136493,NM_032793	chr1,chr1,chr1	-,+,+	MYCL1,MFSD2A,MFSD2A	-51644,1088,1088
chr16:3020894-3021329	chr16	+	3020941	3021161	True	NM_172229,NM_152341,NM_182687,NM_004203,NM_024507	chr16,chr16,chr16,chr16,chr16	+,+,-,-,+	KREMEN2,PAQR4,PKMYT1,PKMYT1,KREMEN2	-6775,-1650,9429,9429,-6775
chr19:44507335-44507635	chr19	+	44507421	44507633	True	NM_006300,NM_003425	chr19,chr19	+,-	ZNF230,ZNF45	-395,-68010
chr4:105416432-105416760	chr4	+	105416468	105416803	True	NM_025212,NM_017628	chr4,chr4	-,+	CXXC4,TET2	-4001,650228
chr1:50580272-50582136	chr1	+	50580278	50582015	True	NM_032785,NM_001144774,NM_001144775,NM_021952	chr1,chr1,chr1,chr1	-,+,+,+	AGBL4,ELAVL4,ELAVL4,ELAVL4	-90652,-5748,-8378,-5748
chr5:60128488-60130269	chr5	+	60128653	60129975	True	NM_001104558,NM_174889	chr5,chr5	-,+	ELOVL7,NDUFAF2	10188,110980
chr10:99332330-99333477	chr10	+	99332438	99333152	True	NM_178832,NM_001129981,NM_020349	chr10,chr10,chr10	-,+,+	MORN4,ANKRD2,ANKRD2	60242,-233,-233
chr22:41462571-41463155	chr22	+	41462715	41462991	True	NM_138481,NR_031694	chr22,chr22	-,+	CHADL,MIR1281	173994,25525
chr17:17876597-17876833	chr17	+	17876659	17876853	True	NM_001130090,NM_001130091,NM_001130092,NM_001033551,NM_031294,NM_001082968	chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,-,+,-	LRRC48,LRRC48,LRRC48,TOM1L2,LRRC48,TOM1L2	-591,-591,-591,-875,-591,-875
chr11:75379879-75380278	chr11	+	75379897	75380237	True	NM_033063,NM_025098,NM_207577	chr11,chr11,chr11	-,+,-	MAP6,MOGAT2,MAP6	-418,48696,-418
chr2:178273832-178274041	chr2	+	178273832	178274029	True	NM_003659,NR_026966	chr2,chr2	+,-	AGPS,LOC100130691	-16412,-16413
chr14:35424879-35425250	chr14	+	35424969	35425035	True	NR_002937,NM_182648	chr14,chr14	+,-	C14orf19,BAZ1A	-15893,-80116
chr19:54312102-54312402	chr19	+	54312121	54312203	True	NM_033297,NR_029866	chr19,chr19	-,+	NLRP12,MIR373	-162,-20220
chr9:116140342-116140755	chr9	+	116140360	116140497	True	NM_017688,NM_031219	chr9,chr9	+,-	BSPRY,HDHD3	-28599,-2019
chr14:81433922-81435398	chr14	+	81433943	81435451	True	NM_152446,NM_000369	chr14,chr14	-,+	C14orf145,TSHR	-28059,-12132
chr6:75953080-75953509	chr6	+	75953112	75953558	True	NR_029466,NM_001100409,NM_001865	chr6,chr6,chr6	-,+,-	COX7A2,SENP6,COX7A2	136,358063,136
chrX:48915350-48915606	chrX	+	48915426	48915538	True	NM_001163321,NM_001163322,NM_001163323,NM_006521,NM_033626	chrX,chrX,chrX,chrX,chrX	+,+,+,-,+	CCDC120,CCDC120,CCDC120,TFE3,CCDC120	984,977,984,-14436,977
chr8:125486571-125486796	chr8	+	125486589	125486771	True	NM_001146160,NM_007218	chr8,chr8	-,+	TATDN1,RNF139	64608,236
chr18:11848939-11849355	chr18	+	11848939	11849225	True	NM_023075,NM_020412	chr18,chr18	-,+	MPPE1,CHMP1B	59468,2163
chr1:36023956-36024263	chr1	+	36024150	36024302	True	NM_014284,NM_001014839,NM_001014841,NM_024874	chr1,chr1,chr1,chr1	+,+,+,-	NCDN,NCDN,NCDN,KIAA0319L	-808,-808,-808,-1113
chr9:127955387-127956018	chr9	+	127955696	127955801	True	NM_005833,NM_001123355,NM_002721,NM_001123369,NM_001174153,NM_001174152	chr9,chr9,chr9,chr9,chr9,chr9	+,-,-,-,+,+	RABEPK,PPP6C,PPP6C,PPP6C,RABEPK,RABEPK	7060,-3478,-3478,-3478,7019,7019
chr1:87168702-87169761	chr1	+	87168974	87169788	True	NM_016009,NM_004261	chr1,chr1	+,-	SH3GLB1,SEP15	468,210369
chr10:94820005-94820207	chr10	+	94820018	94820174	True	NM_013451,NM_183374	chr10,chr10	-,+	MYOF,CYP26C1	421950,846
chr17:42386148-42386373	chr17	+	42386180	42386306	True	NM_001144826,NM_001143780,NM_001144825,NM_006695	chr17,chr17,chr17,chr17	+,-,+,+	RUNDC3A,SLC25A39,RUNDC3A,RUNDC3A	-304,15961,-304,-304
chr13:30428641-30429481	chr13	+	30428685	30429519	True	NM_007106,NR_033889	chr13,chr13	-,+	UBL3,LOC440131	-3865,81148
chr11:67032820-67033498	chr11	+	67032828	67033442	True	NM_001619,NM_021173	chr11,chr11	+,-	ADRBK1,POLD4	462,87660
chr17:55122253-55122536	chr17	+	55122456	55122584	True	NM_004645,NR_002818	chr17,chr17	-,+	COIL,RNF126P1	-84045,254
chr6:87655750-87656554	chr6	+	87655883	87656514	True	NM_000735,NM_000865	chr6,chr6	-,+	CGA,HTR1E	148373,-8911
chr12:6378842-6379459	chr12	+	6378865	6379500	True	NM_018173,NM_001065	chr12,chr12	+,-	PLEKHG6,TNFRSF1A	40101,71833
chr20:57768414-57768658	chr20	+	57768453	57768657	True	NR_037930,NM_178457	chr20,chr20	-,+	SLMO2-ATP5E,ZNF831	-150552,-2429
chr11:126150996-126152503	chr11	+	126151307	126152396	True	NM_148910,NM_003139,NM_001039661	chr11,chr11,chr11	+,-,+	TIRAP,SRPR,TIRAP	585,-12430,585
chr5:134914601-134914831	chr5	+	134914701	134914796	True	NM_004887,NM_145282	chr5,chr5	-,+	CXCL14,SLC25A48	224,255568
chr6:139697538-139698238	chr6	+	139697589	139698172	True	NM_016217,NM_001168389,NM_006079,NM_001168388	chr6,chr6,chr6,chr6	+,-,-,-	HECA,CITED2,CITED2,CITED2	-241398,-2239,-1804,-2090
chr19:50463351-50463621	chr19	+	50463388	50463630	True	NM_001135163,NM_052884,NR_002825	chr19,chr19,chr19	-,-,+	SIGLEC11,SIGLEC11,SIGLEC16	849,849,9281
chr19:50463351-50463621	chr19	+	51919914	51919964	False	NM_033130,NM_001171156,NM_001171157,NR_033235,NM_001171161,NM_001171160,NM_001171158,NM_001171159	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,+,-,-,-,-	SIGLEC10,SIGLEC10,SIGLEC10,LOC100129083,SIGLEC10,SIGLEC10,SIGLEC10,SIGLEC10	1143,1143,1143,-805,1143,1143,1143,1143
chr19:50463351-50463621	chr19	-	50473627	50473869	False	NM_001135163,NM_052884,NR_002825	chr19,chr19,chr19	-,-,+	SIGLEC11,SIGLEC11,SIGLEC16	-9198,-9198,-766
chr1:109583732-109583985	chr1	+	109583810	109583990	True	NM_001142550,NM_001142551,NM_014969,NM_020141	chr1,chr1,chr1,chr1	-,-,-,+	WDR47,WDR47,WDR47,TMEM167B	910,910,910,49412
chr12:112544612-112545407	chr12	+	112545102	112545445	True	NM_001143906,NM_024953	chr12,chr12	+,-	TRAFD1,NAA25	17903,1241
chr19:15617559-15618593	chr19	+	15617642	15618480	True	NM_173483,NM_052890	chr19,chr19	+,-	CYP4F22,PGLYRP2	855,-27327
chr20:58180833-58181245	chr20	+	58180832	58181193	True	NM_080672,NM_014258	chr20,chr20	+,-	PHACTR3,SYCP2	-1280,326074
chr14:94464805-94465536	chr14	+	94464887	94465551	True	NR_024183,NR_024182,NM_001202429,NR_024184	chr14,chr14,chr14,chr14	+,+,-,+	C14orf48,C14orf48,ASB2,C14orf48	-1296,-1322,-21811,-1296
chr16:71910988-71911677	chr16	+	71911093	71911552	True	NM_014761,NM_017530,NM_001201554,NM_001201556,NM_001201552,NM_001201553	chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,-,-,-	KIAA0174,ZNF821,ZNF821,ZNF821,ZNF821,ZNF821	17893,5943,6592,6592,6592,5943
chr14:68283996-68284256	chr14	+	68284000	68284175	True	NM_133510,NM_015346,NM_133509,NM_002877	chr14,chr14,chr14,chr14	+,-,+,+	RAD51L1,ZFYVE26,RAD51L1,RAD51L1	2320,-694,2320,2320
chr10:50818272-50818486	chr10	+	50818391	50818467	True	NM_000124,NM_003055,NM_001142934,NM_001142933,NM_001142929,NM_020549,NM_020984,NM_020985,NM_020986	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,+,+,+,+,+,+,+,+	ERCC6,SLC18A3,CHAT,CHAT,CHAT,CHAT,CHAT,CHAT,CHAT	-71244,-95,3615,3615,3615,3615,-1301,2686,2686
chr1:161078878-161080788	chr1	+	161078917	161080494	True	NM_001185094,NM_012394,NM_001185092,NM_005600,NM_001185093	chr1,chr1,chr1,chr1,chr1	+,-,+,+,+	NIT1,PFDN2,NIT1,NIT1,NIT1	7413,7422,7367,7367,7412
chr17:72428300-72428518	chr17	+	72428314	72428430	True	NM_018653,NM_022036,NM_001080466	chr17,chr17,chr17	+,+,-	GPRC5C,GPRC5C,BTBD17	1405,-698,-70356
chr7:75024654-75025073	chr7	+	75024754	75024864	True	NM_198853,NM_198924,NR_003614	chr7,chr7,chr7	+,+,-	TRIM74,TRIM73,PMS2L2	38,38,-36539
chr7:75024654-75025073	chr7	-	72440035	72440145	False	NR_033323,NR_003602	chr7,chr7	-,+	NSUN5P2,LOC541473	-14733,46
chr16:30348439-30348660	chr16	+	30348576	30348702	True	NR_002453,NM_013292	chr16,chr16	-,+	LOC595101,MYLPF	-1881,37420
chr22:38070670-38071039	chr22	+	38070890	38071088	True	NM_002305,NM_006498	chr22,chr22	+,-	LGALS1,LGALS2	524,-94866
chr18:61145257-61146151	chr18	+	61145261	61145996	True	NM_004869,NM_002639	chr18,chr18	-,+	VPS4B,SERPINB5	-55509,-1168
chr6:144311549-144311911	chr6	+	144311572	144311869	True	NM_001013623,NM_001080952	chr6,chr6	+,-	C6orf94,PLAGL1	-126050,17723
chr17:40910568-40912141	chr17	+	40910572	40912044	True	NR_024462,NR_024461,NM_005854	chr17,chr17,chr17	-,-,+	LOC100190938,LOC100190938,RAMP2	1282,1282,1167
chr3:12596702-12597303	chr3	+	12596841	12597341	True	NM_001195279,NM_014160	chr3,chr3	-,+	LOC100129480,MKRN2	-9878,1252
chr1:159170776-159171470	chr1	+	159170841	159171363	True	NM_002036,NR_037870,NM_001122951	chr1,chr1,chr1	+,-,+	DARC,LOC100131825,DARC	2439,899,3685
chrX:36085938-36086794	chrX	+	36086117	36086750	True	NM_173695,NM_031442	chrX,chrX	+,-	CXorf59,TMEM47	-21128,-1410712
chr19:56345056-56346955	chr19	+	56345205	56346767	True	NM_145007,NM_134444	chr19,chr19	-,+	NLRP11,NLRP4	1411,1176
chr12:8113200-8113540	chr12	+	8113333	8113583	True	NM_006931,NM_018416	chr12,chr12	-,+	SLC2A3,FOXJ2	-24441,71775
chr12:11809689-11811462	chr12	+	11809916	11811043	True	NM_001987,NM_006248	chr12,chr12	+,-	ETV6,PRB2	-7179,-261418
chr5:180626970-180627714	chr5	+	180627091	180627723	True	NM_203295,NM_203294,NM_203297,NM_203296,NM_033342,NM_203293,NM_033549	chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,-,-,+	TRIM7,TRIM7,TRIM7,TRIM7,TRIM7,TRIM7,TRIM41	3679,3679,269,3679,4516,4516,22582
chr19:53837090-53837492	chr19	+	53837121	53837301	True	NM_138374,NM_033341	chr19,chr19	+,-	ZNF845,BIRC8	-170,-42246
chr20:60761123-60761715	chr20	+	60761129	60761577	True	NM_007232,NM_015666	chr20,chr20	-,+	HRH3,GTPBP5	33803,-3099
chr6:26183096-26183476	chr6	+	26183193	26183531	True	NM_003523,NM_003539	chr6,chr6	+,-	HIST1H2BE,HIST1H4D	492,5830
chr10:18637176-18637591	chr10	+	18637285	18637384	True	NM_182543,NM_201590	chr10,chr10	-,+	NSUN6,CACNB2	303217,-7732
chr2:191045054-191045280	chr2	+	191045176	191045294	True	NM_001042519,NM_005259,NM_032321	chr2,chr2,chr2	+,-,+	C2orf88,MSTN,C2orf88	294,-117721,386
chr16:2879729-2880147	chr16	+	2879784	2880140	True	NR_026864,NM_145252	chr16,chr16	-,+	PRSS30P,ZG16B	12662,32
chr12:6715789-6716000	chr12	+	6715789	6715857	True	NM_001273,NM_002046	chr12,chr12	-,+	CHD4,GAPDH	744,-72183
chr20:61637443-61637942	chr20	+	61637508	61637778	True	NM_080606,NR_033370	chr20,chr20	-,+	BHLHE23,LOC63930	659,2956
chr11:120891116-120892329	chr11	+	120891246	120892150	True	NM_001130047,NM_012101,NM_152715	chr11,chr11,chr11	+,-,+	TBCEL,TRIM29,TBCEL	2652,-882383,2662
chr1:150234831-150235964	chr1	+	150234914	150235850	True	NM_012113,NM_024579,NM_016022,NM_001077628	chr1,chr1,chr1,chr1	+,+,-,-	CA14,C1orf54,APH1A,APH1A	-4754,9332,5732,5732
chr1:100320174-100320729	chr1	+	100320342	100320481	True	NM_000643,NM_000642,NM_000645,NM_000644,NM_000646,NM_000028,NM_001013660	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,+,-	AGL,AGL,AGL,AGL,AGL,AGL,FRRS1	-4349,-4754,6284,-4349,-3863,-4349,-88993
chr6:116989441-116989727	chr6	+	116989449	116989693	True	NM_145062,NM_002269	chr6,chr6	-,+	ZUFSP,KPNA5	330,12673
chr17:52998454-52998821	chr17	+	52998460	52998831	True	NM_005486,NR_027941	chr17,chr17	+,-	TOM1L1,COX11	-20459,47284
chr7:27504417-27505218	chr7	+	27504652	27505266	True	NM_001989,NM_152740	chr7,chr7	+,-	EVX1,HIBADH	-222539,197404
chr3:2178605-2179841	chr3	+	2178761	2179731	True	NM_175607,NM_000564	chr3,chr3	+,-	CNTN4,IL5RA	-38271,972377
chr22:25417123-25417844	chr22	+	25417328	25417765	True	NM_001001663,NM_001145206	chr22,chr22	-,+	TMEM211,KIAA1671	-82014,6175
chr1:40953742-40954393	chr1	+	40953880	40954334	True	NM_001852,NM_198494	chr1,chr1	-,+	COL9A2,ZNF642	-170941,-10629
chr7:73039245-73039806	chr7	+	73039743	73039813	True	NM_032951,NM_032952,NM_032953,NM_032954,NM_001077621	chr7,chr7,chr7,chr7,chr7	-,-,-,-,+	MLXIPL,MLXIPL,MLXIPL,MLXIPL,VPS37D	-873,-873,-873,-873,42360
chr10:99186713-99187474	chr10	+	99186803	99187473	True	NM_002629,NM_016046	chr10,chr10	+,-	PGAM1,EXOSC1	-828,18345
chr2:27632498-27633414	chr2	+	27632704	27633328	True	NM_177983,NM_013392	chr2,chr2	-,+	PPM1G,NRBP1	-208,18144
chr2:55496436-55497300	chr2	+	55496894	55497168	True	NM_001005369,NR_027258,NM_002453	chr2,chr2,chr2	-,+,-	MTIF2,PRORSD1P,MTIF2	-579,12286,-510
chr3:55521887-55522103	chr3	+	55521956	55522144	True	NM_003392,NM_001012506	chr3,chr3	-,+	WNT5A,CCDC66	-625,1069039
chr17:18528636-18530555	chr17	+	18528669	18530117	True	NR_036647,NM_001037330	chr17,chr17	-,+	CCDC144B,TRIM16L	261,95284
chr3:42812689-42813483	chr3	+	42812883	42813408	True	NM_001296,NM_144719	chr3,chr3	+,-	CCBP2,CCDC13	37555,1396
chr17:79611659-79611903	chr17	+	79611670	79611932	True	NM_017921,NM_031945	chr17,chr17	-,+	NPLOC4,TSPAN10	-7532,-2372
chr11:65819575-65819781	chr11	+	65819589	65819807	True	NM_033036,NM_006842	chr11,chr11	-,+	GAL3ST3,SF3B2	-2938,8
chr19:45996053-45996336	chr19	+	45996305	45996371	True	NM_005619,NM_001080401,NM_206900,NM_206901	chr19,chr19,chr19,chr19	-,+,-,-	RTN2,PPM1N,RTN2,RTN2	3990,5359,3992,153
chr2:65598696-65598929	chr2	+	65598698	65598904	True	NM_005722,NM_001128210	chr2,chr2	+,-	ACTR2,SPRED2	-143923,-4767
chr12:109488242-109488533	chr12	+	109488336	109488517	True	NM_032663,NM_018711	chr12,chr12	+,-	USP30,SVOP	1862,-29491
chr1:151031403-151031677	chr1	+	151031455	151031713	True	NM_001038707,NM_006818,NM_020239	chr1,chr1,chr1	-,+,-	CDC42SE1,MLLT11,CDC42SE1	462,437,462
chr1:3711540-3712406	chr1	+	3711777	3712190	True	NM_020710,NM_001163724	chr1,chr1	-,+	LRRC47,LOC388588	931,-22476
chr9:92096538-92097522	chr9	+	92096591	92097571	True	NM_006378,NM_006705,NM_001142287	chr9,chr9,chr9	-,+,-	SEMA4D,GADD45G,SEMA4D	-1980,122355,-1980
chr11:119074794-119075775	chr11	+	119074952	119075812	True	NM_001145018,NM_005188	chr11,chr11	-,+	CCDC153,CBL	-8368,1177
chr22:30115438-30115689	chr22	+	30115594	30115718	True	NM_001003692,NM_182527	chr22,chr22	-,+	ZMAT5,CABP7	47301,625
chr7:66339399-66340373	chr7	+	66339491	66340421	True	NR_003934,NM_017994	chr7,chr7	-,+	LOC729156,C7orf42	-29678,45781
chr7:151657276-151658446	chr7	+	151657321	151658081	True	NM_145292,NM_016203,NR_033169	chr7,chr7,chr7	+,-,+	GALNTL5,PRKAG2,GALNTL5	-3908,-83005,-3908
chr3:179063530-179064395	chr3	+	179063576	179064428	True	NM_033540,NM_171828	chr3,chr3	+,-	MFN1,KCNMB3	1051,-78738
chr1:64493-65890	chr19	+	106447	107409	False	NR_026820,NM_001005240	chr19,chr19	-,+	FAM138F,OR4F17	-28757,3269
chr1:64493-65890	chr15	-	102465432	102465996	False	NR_026819,NM_001004195	chr15,chr15	+,-	FAM138E,OR4F4	29091,-2170
chr1:64493-65890	chr1	+	64863	65825	True	NM_001005221,NR_028325	chr1,chr1	-,+	OR4F29,LOC100132062	556259,258066
chr17:63053994-63054217	chr17	+	63053998	63054168	True	NM_006572,NM_001165933	chr17,chr17	-,+	GNA13,RGS9	-1078,79287
chr6:167656958-167658106	chr6	+	167657252	167658142	True	NM_005299,NM_001143947	chr6,chr6	-,+	GPR31,UNC93A	-85933,46660
chr16:1477886-1478103	chr16	+	1478076	1478152	True	NM_001010878,NM_016111	chr16,chr16	-,+	C16orf91,TELO2	1243,65199
chr15:100880494-100881083	chr15	+	100880620	100880890	True	NR_028140,NM_024708,NM_139057	chr15,chr15,chr15	-,+,-	FLJ42289,ASB7,ADAMTS17	9598,261864,1343
chr15:74657022-74657384	chr15	+	74657035	74657423	True	NM_001099773,NM_182791,NM_000781	chr15,chr15,chr15	-,+,-	CYP11A1,CCDC33,CYP11A1	1180,-46188,2708
chr6:89927299-89927827	chr6	+	89927397	89927857	True	NM_001010853,NM_002042	chr6,chr6	+,-	PM20D2,GABRR1	-71679,53
chr6:5003503-5003784	chr6	+	5003598	5003816	True	NM_001145115,NM_006638	chr6,chr6	+,-	PPP1R3G,RPP40	81903,505
chrX:103087265-103087760	chrX	+	103087373	103087731	True	NM_199478,NM_016370	chrX,chrX	+,-	PLP1,RAB9B	-55670,-161
chr12:58145281-58145659	chr12	+	58145300	58145586	True	NM_005981,NM_014770,NM_138396,NM_000075	chr12,chr12,chr12,chr12	+,-,+,-	TSPAN31,AGAP2,MARCH9,CDK4	-6567,-9360,3313,628
chr1:236562051-236563024	chr1	+	236562056	236563065	True	NM_145861,NM_019891,NM_080738	chr1,chr1,chr1	+,-,+	EDARADD,ERO1LB,EDARADD	-4427,-116717,-3391
chr19:663368-663581	chr19	+	663450	663628	True	NM_005860,NM_194460	chr19,chr19	+,-	FSTL3,RNF126	12760,-217
chr1:152671616-152672584	chr1	+	152671694	152672580	True	NM_178428,NM_178431,NM_178356	chr1,chr1,chr1	+,-,+	LCE2A,LCE3A,LCE4A	-905,-76115,8942
chr20:62204799-62205126	chr20	+	62204965	62205117	True	NM_033405,NM_024059,NM_001037335	chr20,chr20,chr20	-,+,-	PRIC285,C20orf195,PRIC285	-5858,-20643,525
chr12:8809355-8810461	chr12	+	8809632	8810133	True	NM_003480,NM_020734	chr12,chr12	-,+	MFAP5,RIMKLB	5358,40384
chr7:122485567-122487013	chr7	+	122485571	122486884	True	NM_001009571,NR_036484	chr7,chr7	-,+	CADPS2,LOC154860	39980,-541911
chr1:243428834-243429709	chr1	+	243429125	243429533	True	NM_006642,NM_014812	chr1,chr1	+,-	SDCCAG8,CEP170	-9876,-10417
chr14:58668577-58669169	chr14	+	58668745	58668991	True	NM_018477,NM_001001872	chr14,chr14	+,-	ACTR10,C14orf37	-1978,-49898
chr12:32111016-32111474	chr12	+	32111201	32111485	True	NM_018169,NM_001013699	chr12,chr12	+,-	C12orf35,H3F3C	867,-166026
chr11:118214228-118214460	chr11	+	118214258	118214350	True	NM_000073,NM_001040651,NM_000732	chr11,chr11,chr11	+,-,-	CD3G,CD3D,CD3D	708,-799,-799
chr19:35489630-35490327	chr19	+	35490079	35490215	True	NM_175872,NM_001136199,NM_020895	chr19,chr19,chr19	-,+,+	ZNF792,GRAMD1A,GRAMD1A	-35126,1030,1030
chr10:16568366-16569519	chr10	+	16568413	16569561	True	NM_001010908,NM_030664	chr10,chr10	-,+	C1QL3,PTER	-4409,-89504
chr1:202781379-202782313	chr1	+	202781397	202782339	True	NM_006618,NR_002929	chr1,chr1	-,+	KDM5B,LOC148709	-3848,48542
chr11:31349570-31350065	chr11	+	31349690	31349957	True	NM_181706,NM_181807	chr11,chr11	+,-	DNAJC24,DCDC1	41419,41465
chr14:56586198-56587217	chr14	+	56586248	56587199	True	NR_026797,NM_021255	chr14,chr14	-,+	C14orf34,PELI2	-322856,-1216
chr9:111764733-111766409	chr9	+	111764800	111766402	True	NM_003798,NM_017832	chr9,chr9	-,+	CTNNAL1,C9orf6	9413,-68186
chr5:68513630-68513871	chr5	+	68513668	68513754	True	NM_033281,NM_176816	chr5,chr5	+,-	MRPS36,CCDC125	-146,102706
chr7:143696864-143697881	chr7	+	143696885	143697898	True	NM_014719,NM_001005281	chr7,chr7	-,+	FAM115A,OR6B1	-97713,3191
chr14:75225095-75226057	chr14	+	75225427	75226079	True	NM_019589,NM_001039479	chr14,chr14	+,-	YLPM1,KIAA0317	3989,-45620
chr11:134141583-134143087	chr11	+	134142272	134143014	True	NM_001080407,NM_199298	chr11,chr11	+,-	GLB1L3,THYN1	3260,-19012
chr15:89011960-89013267	chr15	+	89012338	89013268	True	NM_022163,NM_022839,NM_176805	chr15,chr15,chr15	-,+,+	MRPL46,MRPS11,MRPS11	-1705,-1705,-1705
chr18:5296771-5297024	chr18	+	5296828	5297070	True	NR_026569,NM_003409,NM_001143823,NR_015389	chr18,chr18,chr18,chr18	-,-,-,+	ZFP161,ZFP161,ZFP161,LOC339290	-1128,-789,-789,-58780
chr15:25416230-25416554	chr15	+	25416292	25416538	True	NR_003304,NM_130838,NR_003298,NR_003301,NR_001291,NR_003302,NR_003296,NR_003297,NR_003294,NR_003295	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,-,+,+,+,+,+,+,+,+	SNORD115-12,UBE3A,SNORD115-6,SNORD115-9,SNORD115-1,SNORD115-10,SNORD115-4,SNORD115-5,SNORD115-2,SNORD115-3	7349,234165,9105,7349,-473,7349,5440,7346,1243,3535
chr13:96705807-96706185	chr13	+	96705812	96706194	True	NM_153456,NM_020121	chr13,chr13	+,-	HS6ST3,UGGT2	36898,-76
chr11:33787836-33788936	chr11	+	33787849	33788771	True	NM_012175,NM_033406,NM_012194	chr11,chr11,chr11	-,-,+	FBXO3,FBXO3,C11orf41	7350,7350,-224030
chr19:11908724-11909231	chr19	+	11908725	11909241	True	NM_152356,NM_001080493	chr19,chr19	+,-	ZNF491,ZNF823	149,-58965
chr4:160210350-160210976	chr4	+	160210412	160210941	True	NR_037459,NM_014247	chr4,chr4	-,+	MIR3688,RAPGEF2	-160366,-21479
chr16:2069461-2069809	chr16	+	2069498	2069858	True	NM_001130012,NM_178167,NM_001099456,NM_004785	chr16,chr16,chr16,chr16	+,-,+,+	SLC9A3R2,ZNF598,NPW,SLC9A3R2	7029,-9735,-28,7029
chr1:76204207-76204499	chr1	+	76204452	76204544	True	NM_152697,NM_001127328	chr1,chr1	-,+	SLC44A5,ACADM	-127653,-14462
chr1:28910214-28911622	chr1	+	28910214	28910721	True	NR_024127,NR_002987,NR_003077,NM_152304,NR_002976,NM_001193532,NR_003035	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,+,-	SNHG12,SNORA61,SNORD99,RAB42,SNORA44,RAB42,SNORA16A	-1848,-3809,-4880,7990,-3190,8285,-2649
chr7:127984825-127985998	chr7	+	127985041	127985836	True	NM_000230,NM_001166135,NM_018077	chr7,chr7,chr7	+,-,-	LEP,RBM28,RBM28	-103768,-1079,-1079
chr11:118015804-118016250	chr11	+	118015849	118016197	True	NR_024527,NM_001142349,NM_001142348,NM_019894,NM_174934	chr11,chr11,chr11,chr11,chr11	-,-,-,+,-	SCN4B,SCN4B,SCN4B,TMPRSS4,SCN4B	37,37,7483,-68173,7483
chr19:48614088-48615033	chr19	+	48614142	48614872	True	NM_001159323,NM_001159322,NM_022142,NM_003706	chr19,chr19,chr19,chr19	-,-,+,-	PLA2G4C,PLA2G4C,ELSPBP1,PLA2G4C	-33,-33,-116285,-33
chr12:9990626-9991040	chr12	+	9990642	9991003	True	NM_005127,NM_016523	chr12,chr12	-,+	CLEC2B,KLRF1	31510,-10624
chr1:27530037-27531091	chr1	+	27530086	27530975	True	NM_015023,NM_003047	chr1,chr1	+,-	WDTC1,SLC9A1	30031,-48635
chr10:14881486-14881908	chr10	+	14881613	14881893	True	NM_001029954,NM_016299	chr10,chr10	-,+	CDNF,HSPA14	-1630,-1404
chr4:89204550-89204759	chr4	+	89204560	89204800	True	NM_001165136,NM_152542	chr4,chr4	+,-	HERC6,PPM1K	95090,1138
chr19:55142703-55143843	chr19	+	55142893	55143657	True	NM_001081639,NM_001081638,NM_001081637,NM_145057	chr19,chr19,chr19,chr19	+,+,+,-	LILRB1,LILRB1,LILRB1,CDC42EP5	-1036,-1036,-976,-158471
chr11:66742370-66742799	chr11	+	66742373	66742728	True	NM_001136485,NM_001040716	chr11,chr11	+,-	C11orf86,PC	25,-16526
chr5:98264567-98264967	chr5	+	98264571	98264987	True	NM_001270,NR_036530	chr5,chr5	-,+	CHD1,LOC100289230	-2333,-58
chr14:67963102-67963605	chr14	+	67963203	67963319	True	NM_020715,NM_182526	chr14,chr14	+,-	PLEKHH1,TMEM229B	36688,18752
chr14:90090031-90091092	chr14	+	90090307	90091141	True	NR_024620,NM_001085471	chr14,chr14	+,-	PRO1768,FOXN3	-47805,-4813
chr1:36947934-36948290	chr1	+	36947935	36948023	True	NM_000760,NM_024676,NM_172313,NM_156039	chr1,chr1,chr1,chr1	-,+,-,-	CSF3R,SH3D21,CSF3R,CSF3R	942,-175280,942,942
chr7:94947592-94948018	chr7	+	94947649	94948051	True	NM_145872,NM_000446	chr7,chr7	+,-	ASB4,PON1	167161,5883
chr7:92130198-92130492	chr7	+	92130201	92130453	True	NM_000466,NM_032120	chr7,chr7	-,+	PEX1,C7orf64	27456,27633
chr19:56687976-56688560	chr19	+	56688263	56688601	True	NM_001145546,NM_001080456,NM_033106	chr19,chr19,chr19	+,-,+	GALP,ZSCAN5B,GALP	-925,15870,-925
chr9:74984533-74985901	chr9	+	74984776	74985345	True	NM_138691,NM_001102420,NM_001102421,NM_006007	chr9,chr9,chr9,chr9	+,-,-,-	TMC1,ZFAND5,ZFAND5,ZFAND5	151371,-4613,-4613,-4613
chr4:39143906-39145562	chr4	+	39144166	39145236	True	NM_025132,NM_024943	chr4,chr4	+,-	WDR19,TMEM156	38787,-110125
chr7:12642860-12644767	chr7	+	12643102	12644556	True	NM_033128,NM_001135924	chr7,chr7	+,-	SCIN,VWDE	-14006,-199250
chr7:92224029-92224948	chr7	+	92224202	92224851	True	NR_026902,NM_152789,NR_034169,NM_001040057	chr7,chr7,chr7,chr7	+,-,-,-	MGC16142,FAM133B,LOC728066,FAM133B	-56471,-4496,-4506,-4496
chr7:54629708-54630352	chr7	+	54630114	54630340	True	NM_182546,NM_001012456	chr7,chr7	+,-	VSTM2A,SEC61G	-20146,196649
chr16:86377190-86378403	chr16	+	86377288	86378452	True	NR_024406,NM_001451	chr16,chr16	-,+	LOC732275,FOXF1	883,165680
chr19:1386098-1386586	chr19	+	1386248	1386508	True	NM_000156,NM_024407	chr19,chr19	-,+	GAMT,NDUFS7	15094,-2416
chr4:3550590-3550814	chr4	+	3550594	3550660	True	NM_002337,NM_173660	chr4,chr4	-,+	LRPAP1,DOK7	-16370,-85612
chr17:72268209-72269610	chr17	+	72268295	72269539	True	NR_026914,NM_001172810,NM_023036	chr17,chr17,chr17	-,+,+	MGC16275,DNAI2,DNAI2	-58835,846,846
chr20:52821112-52822898	chr20	+	52821176	52822885	True	NM_001128915,NM_002623	chr20,chr20	-,+	CYP24A1,PFDN4	-30660,1616
chr12:53071683-53072330	chr12	+	53071715	53072341	True	NM_199187,NM_006121	chr12,chr12	+,-	KRT18,KRT1	270313,1900
chr12:113573662-113573905	chr12	+	113573672	113573954	True	NM_001144872,NM_004658,NM_001193521,NM_001193520	chr12,chr12,chr12,chr12	+,-,-,-	CCDC42B,RASAL1,RASAL1,RASAL1	13708,140,-113,140
chr15:78930968-78931731	chr15	+	78931070	78931643	True	NM_000745,NM_000750	chr15,chr15	+,-	CHRNA5,CHRNB4	-73259,2003
chr19:14694023-14694358	chr19	+	14694293	14694383	True	NM_004146,NM_207390,NM_001204118	chr19,chr19,chr19	-,+,+	NDUFB7,CLEC17A,CLEC17A	-11404,-448,-448
chr5:36150259-36151134	chr5	+	36150338	36151059	True	NR_030306,NM_001007527,NM_005983,NM_032637	chr5,chr5,chr5,chr5	-,-,+,+	MIR580,LMBRD2,SKP2,SKP2	-2248,1013,1129,1129
chr2:135676112-135676626	chr2	+	135676130	135676596	True	NM_058241,NM_001241,NR_037649,NR_036549	chr2,chr2,chr2,chr2	+,+,+,-	CCNT2,CCNT2,CCNT2,LOC100129961	-75,-75,-75,8
chr22:24346917-24347592	chr22	+	24347158	24347620	True	NR_003081,NM_000854	chr22,chr22	-,+	GSTTP1,GSTT2	100,-24896
chr22:24346917-24347592	chr22	+	24401707	24401998	False	NR_003082,NM_012295,NM_001201429,NM_001199281	chr22,chr22,chr22,chr22	-,+,+,+	GSTTP2,CABIN1,CABIN1,CABIN1	-49,5766,5766,5821
chr13:19583170-19583660	chr13	+	19583240	19583650	True	NR_002801,NR_026852	chr13,chr13	-,+	PHF2P1,LOC348021	108823,-892
chr17:9939870-9940313	chr17	+	9939962	9940165	True	NM_201432,NM_004246	chr17,chr17	-,+	GAS7,GLP2R	44,-210632
chr4:71529368-71529665	chr4	+	71529565	71529674	True	NM_144646,NM_020368	chr4,chr4	-,+	IGJ,UTP3	2733,24521
chr14:52540666-52542339	chr14	+	52540701	52542296	True	NM_007361,NM_016039	chr14,chr14	-,+	NID2,C14orf166	-4755,-84531
chr22:42541383-42541628	chr22	+	42541385	42541562	True	NR_002570,NR_034118	chr22,chr22	-,+	CYP2D7P1,LOC100132273	-810,-54499
chr20:19874435-19875593	chr20	+	19874809	19875610	True	NM_016652,NM_018993	chr20,chr20	-,+	CRNKL1,RIN2	161130,-4660
chr8:95837582-95839053	chr8	+	95837856	95838976	True	NM_017864,NM_057749	chr8,chr8	+,-	INTS8,CCNE2	-2386,68564
chr15:51397971-51399415	chr15	+	51398102	51399431	True	NR_027642,NM_207381	chr15,chr15	+,-	LOC100132724,TNFAIP8L3	-161834,-629
chr17:46607305-46607512	chr17	+	46607312	46607480	True	NM_002144,NR_033201	chr17,chr17	-,+	HOXB1,LOC404266	842,60342
chrX:19362003-19362209	chrX	+	19362006	19362208	True	NM_001173455,NM_001173454,NM_001173456,NM_000284,NM_001001671	chrX,chrX,chrX,chrX,chrX	+,+,+,+,-	PDHA1,PDHA1,PDHA1,PDHA1,MAP3K15	-46,-46,-46,-46,171221
chr3:12834554-12835663	chr3	+	12834560	12835385	True	NM_012298,NM_001162499,NM_018306	chr3,chr3,chr3	+,+,-	CAND2,CAND2,TMEM40	2785,2785,-33752
chr16:57517350-57518320	chr16	+	57517674	57518246	True	NM_018110,NM_032940	chr16,chr16	-,+	DOK4,POLR2C	2189,-21174
chr6:10698324-10698732	chr6	+	10698324	10698759	True	NM_001145020,NR_026736,NR_026737,NM_017906	chr6,chr6,chr6,chr6	-,-,-,+	C6orf52,C6orf52,C6orf52,PAK1IP1	-3485,-3294,-3485,-3187
chr1:85023463-85024063	chr1	+	85023599	85023979	True	NM_004388,NR_036561	chr1,chr1	-,+	CTBS,SPATA1	16242,-51684
chr19:55881752-55882101	chr19	+	55881801	55882039	True	NM_000641,NM_001145402,NM_139172	chr19,chr19,chr19	-,-,+	IL11,FAM71E2,TMEM190	13,-7181,6164
chr1:20878160-20878919	chr1	+	20878218	20878920	True	NM_024544,NM_207334	chr1,chr1	-,+	MUL1,FAM43B	-43544,11
chr7:69065034-69065448	chr7	+	69065128	69065476	True	NM_001127231,NM_001127232,NM_015570,NR_037477	chr7,chr7,chr7,chr7	+,+,+,-	AUTS2,AUTS2,AUTS2,MIR3914-1	-1274,-1273,-1273,1707330
chr3:184279374-184279619	chr3	+	184279402	184279620	True	NM_022149,NM_004443	chr3,chr3	-,+	MAGEF1,EPHB3	150266,-34
chr6:15002386-15003192	chr6	+	15002385	15002961	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	243565,660384
chr11:72432213-72432938	chr11	+	72432257	72432981	True	NM_015242,NM_001135190,NM_033388	chr11,chr11,chr11	-,-,+	ARAP1,ARAP1,ATG16L2	472,472,92469
chr15:43908878-43909390	chr15	+	43908993	43909381	True	NM_020990,NM_153700	chr15,chr15	+,-	CKMT1B,STRC	-23792,1667
chr15:43908878-43909390	chr15	+	44008455	44008843	False	NM_001015001,NR_002318	chr15,chr15	+,-	CKMT1A,CATSPER2P1	-23422,29703
chr3:14985085-14986473	chr3	+	14985087	14985860	True	NM_022497,NM_003298	chr3,chr3	-,+	MRPS25,NR2C2	121006,3375
chr18:47340878-47341298	chr18	+	47340965	47341305	True	NR_003003,NM_006111	chr18,chr18	+,-	SCARNA17,ACAA2	-623,-714
chr22:42342731-42342991	chr22	+	42342757	42342989	True	NM_024053,NM_001002876,NR_024355,NM_001110215	chr22,chr22,chr22,chr22	-,-,+,-	CENPM,CENPM,LOC339674,CENPM	209,209,5201,-6534
chr6:26123466-26123818	chr6	+	26123466	26123778	True	NM_003526,NM_003512	chr6,chr6	-,+	HIST1H2BC,HIST1H2AC	404,594
chr20:23670947-23671312	chr20	+	23671041	23671359	True	NM_001899,NR_001279	chr20,chr20	-,+	CST4,CSTT	-1379,-171309
chr22:29138347-29138983	chr22	+	29138439	29138965	True	NM_007194,NM_145862,NM_001005735,NM_172002	chr22,chr22,chr22,chr22	-,-,-,+	CHEK2,CHEK2,CHEK2,HSCB	-617,-617,-617,-447
chr18:22931432-22931752	chr18	+	22931439	22931599	True	NM_015461,NM_001025096	chr18,chr18	-,+	ZNF521,PSMA8	665,782216
chr10:76868620-76869867	chr10	+	76868747	76869550	True	NM_001007271,NM_001007273,NM_001007272,NM_016364,NM_144660,NM_001174156	chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,+,+	DUSP13,DUSP13,DUSP13,DUSP13,SAMD8,SAMD8	199,199,199,-9499,1842,1842
chr20:1300409-1301762	chr20	+	1300436	1301385	True	NM_080489,NM_014723,NM_001199784,NM_015685	chr20,chr20,chr20,chr20	-,+,-,-	SDCBP2,SNPH,SDCBP2,SDCBP2	8545,-53527,5179,-6119
chr1:31457575-31457782	chr1	+	31457574	31457765	True	NR_002762,NR_003066	chr1,chr1	+,-	PRO0611,SNORD85	3146,-16490
chr9:132515257-132515464	chr9	+	132515285	132515499	True	NM_014506,NM_004878	chr9,chr9	+,-	TOR1B,PTGES	49932,45
chr4:186876139-186876455	chr4	+	186876205	186876468	True	NM_021069,NM_003265	chr4,chr4	-,+	SORBS2,TLR3	1455,113840
chr1:149903058-149903510	chr1	+	149903206	149903540	True	NM_181873,NM_005850,NM_016074,NM_001145862	chr1,chr1,chr1,chr1	-,-,+,-	MTMR11,SF3B4,BOLA1,MTMR11	4776,-3062,-32102,5301
chr19:17571113-17571579	chr19	+	17571118	17571522	True	NM_198580,NM_138454	chr19,chr19	+,-	SLC27A1,NXNL1	9777,253
chr8:145552710-145553659	chr8	+	145552830	145553622	True	NM_024531,NM_012079,NM_031309	chr8,chr8,chr8	+,-,-	GPR172A,DGAT1,SCRT1	28602,-2263,6371
chr15:40888067-40888918	chr15	+	40888067	40888847	True	NM_144508,NM_052849,NM_170589	chr15,chr15,chr15	+,-,+	CASC5,C15orf57,CASC5	-1675,-30815,-1675
chr5:100240273-100240668	chr5	+	100240291	100240577	True	NM_005668,NM_175052,NM_198507	chr5,chr5,chr5	-,-,+	ST8SIA4,ST8SIA4,FAM174A	-1304,-1321,-369219
chr20:33399772-33400677	chr20	+	33400114	33400443	True	NR_028046,NM_014071	chr20,chr20	+,-	ACSS2,NCOA6	62322,13047
chr2:88823442-88825180	chr2	+	88823675	88825179	True	NM_152670,NM_001135649	chr2,chr2	+,-	C2orf51,FOXI3	135,-71622
chr1:153956508-153957054	chr1	+	153956700	153957102	True	NM_002870,NM_006694,NM_001030	chr1,chr1,chr1	-,-,+	RAB13,JTB,RPS27	1754,-6249,6136
chr12:72090517-72091143	chr12	+	72090716	72091139	True	NM_018279,NM_144982	chr12,chr12	+,-	TMEM19,ZFC3H1	-10898,-32967
chr11:107314899-107316252	chr11	+	107315046	107315686	True	NM_001130037,NM_152434	chr11,chr11	+,-	ELMOD1,CWF19L2	146130,12936
chr19:42946679-42947596	chr19	+	42946700	42947458	True	NM_198477,NM_001410	chr19,chr19	-,+	CXCL17,MEGF8	-6,-116999
chr22:30722420-30722647	chr22	+	30722440	30722696	True	NM_001204240,NM_031937,NM_001017437	chr22,chr22,chr22	-,-,+	TBC1D10A,TBC1D10A,CCDC157	309,309,29930
chr11:124418526-124420086	chr11	+	124418652	124419937	True	NM_001005194,NM_001005195	chr11,chr11	+,-	OR8A1,OR8B12	20027,-5102
chr3:171527816-171528140	chr3	+	171527837	171528187	True	NM_001130081,NM_002662,NM_001164436	chr3,chr3,chr3	-,-,+	PLD1,PLD1,TMEM212	136,136,32951
chr16:67967633-67968783	chr16	+	67967678	67968768	True	NM_006742,NM_001907,NM_002801,NM_000229	chr16,chr16,chr16,chr16	+,-,-,-	PSKH1,CTRL,PSMB10,LCAT	-40554,-1900,2062,9297
chr9:130515807-130516467	chr9	+	130515851	130516459	True	NM_001142532,NM_001142533,NM_001142531,NM_001142534,NR_036055	chr9,chr9,chr9,chr9,chr9	-,-,-,-,+	SH2D3C,SH2D3C,SH2D3C,SH2D3C,MIR2861	8288,1174,8310,1152,31737
chr5:96267926-96269012	chr5	+	96267955	96268731	True	NM_001198541,NM_005575	chr5,chr5	-,+	ERAP1,LNPEP	-118107,2614
chr12:94543913-94544325	chr12	+	94543933	94544276	True	NM_001042399,NM_005761	chr12,chr12	-,+	CCDC41,PLXNC1	309538,-1485
chr2:169099163-169099635	chr2	+	169099544	169099674	True	NM_203463,NM_013233	chr2,chr2	+,-	LASS6,STK39	213160,4481
chr16:69139416-69139925	chr16	+	69139424	69139822	True	NM_138612,NM_005329,NM_001199280,NM_001040146	chr16,chr16,chr16,chr16	+,+,+,-	HAS3,HAS3,HAS3,CHTF8	306,1620,-8,26290
chrX:47493045-47494052	chrX	+	47493117	47493997	True	NM_001145252,NM_002621,NR_028119	chrX,chrX,chrX	-,-,+	CFP,CFP,LOC100133957	-3748,-3413,24234
chr4:170927890-170929604	chr4	+	170927924	170929476	True	NM_001009554,NM_173872	chr4,chr4	-,+	MFAP3L,CLCN3	-2989,-386253
chr7:102915787-102916288	chr7	+	102915964	102916030	True	NR_027768,NR_003561,NM_004279	chr7,chr7,chr7	-,-,+	DPY19L2P2,DPY19L2P2,PMPCB	4933,4779,21842
chrX:3268507-3270089	chrX	+	3268534	3270126	True	NM_004042,NM_015419	chrX,chrX	+,-	ARSF,MXRA5	-283745,-3850
chrX:153236911-153237303	chrX	+	153237067	153237291	True	NR_036174,NM_005334,NM_003492,NR_036175	chrX,chrX,chrX,chrX	+,-,+,-	MIR3202-1,HCFC1,TMEM187,MIR3202-2	9256,-248,699,9386
chr8:53851867-53852326	chr8	+	53851927	53852375	True	NM_014781,NM_005285	chr8,chr8	-,+	RB1CC1,NPBWR1	-224901,92
chr6:50786075-50786790	chr6	+	50786170	50786697	True	NM_001037498,NM_003221	chr6,chr6	-,+	DEFB112,TFAP2B	-769806,-82
chr9:15498127-15499794	chr9	+	15498538	15499443	True	NM_173550,NM_021144	chr9,chr9	+,-	C9orf93,PSIP1	53653,10894
chr8:124097941-124098681	chr8	+	124098076	124098618	True	NM_024295,NM_145647	chr8,chr8	-,+	DERL1,WDR67	-43428,-13214
chr12:6657776-6658029	chr12	+	6657818	6658050	True	NM_001039670,NM_001193457,NM_080730,NR_036467,NM_002046	chr12,chr12,chr12,chr12,chr12	-,-,-,-,+	IFFO1,IFFO1,IFFO1,IFFO1,GAPDH	7249,7249,7249,7249,-14212
chr1:15246978-15248082	chr1	+	15247103	15248071	True	NM_001018000,NM_001018001,NR_027136	chr1,chr1,chr1	+,+,-	KAZN,KAZN,C1orf126	2553,8224,230939
chr21:45577871-45578382	chr21	+	45577884	45578412	True	NM_198155,NM_015259	chr21,chr21	+,-	C21orf33,ICOSLG	-24441,82472
chr12:111807603-111808135	chr12	+	111807602	111807954	True	NM_001177996,NM_001177997,NM_005475,NM_144671	chr12,chr12,chr12,chr12	-,-,+,-	FAM109A,FAM109A,SH2B3,FAM109A	-677,-677,35797,-677
chr5:154199733-154200201	chr5	+	154199764	154200120	True	NM_004779,NM_032385	chr5,chr5	+,-	CNOT8,C5orf4	38077,30143
chr5:35234083-35236015	chr5	+	35234172	35235512	True	NM_194283,NM_000949	chr5,chr5	+,-	DNAJC21,PRLR	-304526,-3349
chr16:88493956-88494166	chr16	+	88493994	88494060	True	NM_000101,NM_001127464	chr16,chr16	-,+	CYBA,ZNF469	223447,-166
chr5:94406923-94408540	chr5	+	94406950	94408433	True	NM_152548,NM_001002796	chr5,chr5	+,-	FAM81B,MCTP1	318614,9164
chr1:20124211-20124688	chr1	+	20124552	20124628	True	NM_015207,NM_181719	chr1,chr1	+,-	OTUD3,TMCO4	84259,1832
chr14:70089177-70089604	chr14	+	70089188	70089652	True	NR_024630,NM_014734	chr14,chr14	-,+	C14orf162,KIAA0247	-51270,-10934
chr19:15939432-15940051	chr19	+	15939490	15940032	True	NM_013940,NR_015379	chr19,chr19	-,+	OR10H1,UCA1	-20554,76
chr16:33363486-33363954	chr16	+	33363858	33363929	True	NR_033866,NM_001205265	chr16,chr16	-,+	LOC390705,TP53TG3B	-65156,-101795
chr19:17376476-17376975	chr19	+	17376578	17376647	True	NM_001033549,NM_031941,NM_014173	chr19,chr19,chr19	+,-,+	BABAM1,USHBP1,BABAM1	1584,-1034,1584
chr18:619565-621335	chr18	+	620109	621356	True	NM_199167,NM_001012716	chr18,chr18	+,-	CLUL1,C18orf56	-3477,37034
chr5:150228017-150229356	chr5	+	150228016	150228716	True	NM_001172831,NM_001145805	chr5,chr5	-,+	ZNF300,IRGM	55891,-1984
chr1:18838312-18839889	chr1	+	18838485	18839838	True	NM_152375,NM_152232	chr1,chr1	+,-	KLHDC7A,TAS1R2	-31112,346370
chr8:41386874-41387081	chr8	+	41386913	41387127	True	NM_152568,NM_032336	chr8,chr8	-,+	NKX6-3,GINS4	117801,-239
chr17:7464086-7464487	chr17	+	7464138	7464509	True	NM_172087,NM_003808,NR_037926,NM_172088,NM_006942,NM_001198624,NM_015670,NM_001198623,NM_001198622	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,-,+,+,+,+	TNFSF13,TNFSF13,SENP3-EIF4A1,TNFSF13,SOX15,TNFSF13,SENP3,TNFSF13,TNFSF13	-2580,-2580,799,-2580,29029,-2580,799,-2580,-2580
chr1:13612949-13614213	chr1	+	13613063	13614261	True	NM_001012277,NM_001012276,NM_001098376	chr1,chr1,chr1	-,-,+	PRAMEF7,PRAMEF8,PRAMEF15	-2576,-1513,27711
chr1:13612949-13614213	chr1	-	12973739	12974937	False	NM_001012277,NM_001012276,NM_001039361	chr1,chr1,chr1	+,+,-	PRAMEF7,PRAMEF8,PRAMEF10	2575,1512,-15645
chr1:13612949-13614213	chr1	+	13392266	13393464	False	NM_001012276,NM_001098376	chr1,chr1	-,+	PRAMEF8,PRAMEF15	-1501,27711
chr4:9534652-9534881	chr4	+	9534724	9534794	True	NR_031688,NM_001040448	chr4,chr4	-,+	MIR548I2,DEFB131	23193,-88515
chr3:141202890-141203938	chr3	+	141203130	141203848	True	NM_006506,NM_001178140	chr3,chr3	+,-	RASA2,TFDP2	2077,515431
chr8:144798951-144799892	chr8	+	144799161	144799941	True	NM_001162914,NM_139021	chr8,chr8	-,+	LOC100130274,MAPK15	-8882,-705
chrX:47929481-47929713	chrX	+	47929527	47929720	True	NM_001190255,NM_001037735,NR_028366,NR_033730	chrX,chrX,chrX,chrX	-,-,+,-	ZNF630,ZNF630,SSX6,ZNF630	1338,845,37646,1362
chr7:92737644-92739376	chr7	+	92737865	92738886	True	NM_024553,NM_001193307,NM_017654	chr7,chr7,chr7	+,-,-	CCDC132,SAMD9,SAMD9	122766,8507,8507
chr5:148930656-148930876	chr5	+	148930688	148930786	True	NM_001892,NM_001001669,NM_001025105	chr5,chr5,chr5	-,+,-	CSNK1A1,ARHGEF37,CSNK1A1	271,30348,271
chr8:24148617-24149755	chr8	+	24148899	24149433	True	NM_003155,NM_014265,NM_021777	chr8,chr8,chr8	-,+,+	STC1,ADAM28,ADAM28	-436579,2146,2146
chr7:91795097-91796911	chr7	+	91795203	91796152	True	NM_001161528,NM_019004	chr7,chr7	-,+	LOC401387,ANKIB1	-613,79395
chr6:159600668-159600901	chr6	+	159600684	159600856	True	NM_032532,NM_138810	chr6,chr6	+,-	FNDC1,TAGAP	-10313,-134500
chrX:128870714-128871724	chrX	+	128870768	128871623	True	NM_017413,NM_003399	chrX,chrX	-,+	APLN,XPNPEP2	-81835,1322
chr4:175847682-175849355	chr4	+	175848320	175849384	True	NM_001130704,NM_001130705,NM_014269,NM_006529,NM_001130703	chr4,chr4,chr4,chr4,chr4	+,+,+,-,+	ADAM29,ADAM29,ADAM29,GLRA3,ADAM29	-8869,-8869,-8869,-97855,-8869
chr4:76824476-76826306	chr4	+	76824668	76826211	True	NM_001130017,NM_006239	chr4,chr4	+,-	ART3,PPEF2	106125,-987
chr19:1903160-1903655	chr19	+	1903305	1903452	True	NM_079834,NM_031213,NM_138422	chr19,chr19,chr19	+,-,+	SCAMP4,FAM108A1,ADAT3	1920,-17787,1964
chr2:142887647-142887964	chr2	+	142887733	142887957	True	NM_018557,NM_001032998	chr2,chr2	-,+	LRP1B,KYNU	1363,747237
chr1:29564643-29564861	chr1	+	29564689	29564785	True	NM_016011,NM_133177,NM_133178,NM_001195001,NM_001024732,NM_005704	chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,+,-,+	MECR,PTPRU,PTPRU,PTPRU,MECR,PTPRU	-7235,-1712,-1712,-1712,-7235,-1712
chr12:132512441-132512733	chr12	+	132512492	132512674	True	NM_175066,NR_002979	chr12,chr12	-,+	DDX51,SNORA49	116256,3094
chr3:71800206-71801336	chr3	+	71800429	71801334	True	NM_173359,NM_018971,NM_001134649	chr3,chr3,chr3	-,+,-	EIF4E3,GPR27,EIF4E3	2641,1866,2249
chr22:30643254-30643607	chr22	+	30643257	30643593	True	NM_001017437,NM_002309	chr22,chr22	+,-	CCDC157,LIF	109033,-461
chr17:18283880-18284322	chr17	+	18283962	18284298	True	NM_148918,NM_001145127	chr17,chr17	-,+	SHMT1,EVPLL	-17106,-2934
chr18:32833710-32834261	chr18	+	32833847	32834299	True	NM_001112734,NM_032347	chr18,chr18	-,+	ZSCAN30,ZNF397	35947,-12904
chr1:100598703-100598936	chr1	+	100598717	100598935	True	NM_019083,NM_194292	chr1,chr1	+,-	CCDC76,SASS6	-62,-206
chr14:94561421-94561740	chr14	+	94561658	94561774	True	NM_020414,NM_206949	chr14,chr14	-,+	DDX24,IFI27L1	-14100,-14070
chr7:12673964-12675092	chr7	+	12674200	12674880	True	NM_033128,NM_001135924	chr7,chr7	+,-	SCIN,VWDE	-45112,-230348
chr14:50989883-50990168	chr14	+	50990053	50990208	True	NM_001127713,NM_006575,NM_198794	chr14,chr14,chr14	+,-,-	ATL1,MAP4K5,MAP4K5	9591,9225,9225
chr2:241073405-241073736	chr2	+	241073427	241073771	True	NM_001163424,NM_148961,NM_138336,NM_002081	chr2,chr2,chr2,chr2	-,-,-,+	MYEOV2,OTOS,MYEOV2,GPC1	2026,6352,2043,301343
chr3:142313132-142314917	chr3	+	142313482	142314913	True	NM_001184,NM_001145319	chr3,chr3	-,+	ATR,PLS1	-15814,315
chr6:35661233-35661968	chr6	+	35661233	35661763	True	NM_004117,NM_145028,NM_001145777,NM_001145776	chr6,chr6,chr6,chr6	-,+,-,-	FKBP5,C6orf81,FKBP5,FKBP5	-4514,43095,-4514,-4541
chr17:5139973-5140264	chr17	+	5140042	5140286	True	NM_207103,NR_034082	chr17,chr17	-,+	C17orf87,LOC100130950	-1959,-44715
chr13:25084614-25085048	chr13	+	25084758	25085067	True	NM_006437,NR_002815	chr13,chr13	-,+	PARP4,LOC374491	1931,69278
chr6:44279688-44280214	chr6	+	44279731	44280175	True	NM_145026,NM_020745	chr6,chr6	+,-	SPATS1,AARS2	30221,938
chrX:12894236-12895635	chrX	+	12894539	12895576	True	NM_016562,NR_030727	chrX,chrX	+,-	TLR7,LOC349408	-9395,65894
chr21:47402846-47403263	chr21	+	47402859	47403245	True	NM_001848,NM_006657	chr21,chr21	+,-	COL6A1,FTCD	-1247,172286
chr1:246950106-246950612	chr1	+	246950108	246950446	True	NR_015422,NM_015446	chr1,chr1	+,-	LOC149134,AHCTF1	2472,144330
chr11:844206-844820	chr11	+	844359	844869	True	NM_003271,NM_021128,NM_001025239,NM_001025238,NM_001025235,NM_001025234,NM_001025237,NM_001025236	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,-,+,+,+,+,+,+	TSPAN4,POLR2L,TSPAN4,TSPAN4,TSPAN4,TSPAN4,TSPAN4,TSPAN4	-1586,-1830,-1586,-1586,-1469,-329,22,-1469
chr15:80722663-80723887	chr15	+	80722763	80723697	True	NM_014862,NR_033833	chr15,chr15	+,-	ARNT2,LOC283688	-26122,-88616
chr19:33072052-33072285	chr19	+	33072126	33072204	True	NM_004708,NM_032139	chr19,chr19	+,-	PDCD5,ANKRD27	-83,93948
chr12:133703844-133705074	chr12	+	133704010	133704804	True	NM_015394,NM_001191054	chr12,chr12	+,-	ZNF10,LOC647589	2409,107668
chr10:35479680-35481050	chr10	+	35479908	35480892	True	NM_182717,NM_001198777,NM_182718,NM_182719,NM_182725,NM_182724,NM_182723,NM_182722,NM_182721,NM_182720	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,-,+,+,+,+,+,+,+,+	CREM,CUL2,CREM,CREM,CREM,CREM,CREM,CREM,CREM,CREM	3162,-100338,3162,3162,3937,3937,3937,3937,3937,3162
chr2:60984161-60985693	chr2	+	60984167	60985060	True	NM_022894,NR_033980	chr2,chr2	+,-	PAPOLG,FLJ16341	-860,123439
chr19:15590634-15591041	chr19	+	15590742	15591082	True	NM_173483,NM_052890	chr19,chr19	+,-	CYP4F22,PGLYRP2	28253,-427
chr8:144692676-144693291	chr8	+	144692699	144693207	True	NM_023078,NM_032862,NM_003313	chr8,chr8,chr8	-,+,-	PYCRL,TIGD5,TSTA3	-915,-12683,6575
chr12:122232699-122233066	chr12	+	122232702	122232968	True	NM_015048,NM_019034,NR_002809	chr12,chr12,chr12	+,-,-	SETD1B,RHOF,LOC338799	9669,-1108,8472
chr2:153575450-153576136	chr2	+	153575515	153576190	True	NM_152522,NR_024526,NM_017892	chr2,chr2,chr2	+,+,-	ARL6IP6,ARL6IP6,PRPF40A	-1143,-1143,-1540
chr6:142938369-142939114	chr6	+	142938369	142939153	True	NR_027311,NM_198569	chr6,chr6	-,+	LOC153910,GPR126	19870,-315370
chr20:3645841-3646878	chr20	+	3646566	3646866	True	NM_145762,NM_022139,NM_001197327	chr20,chr20,chr20	-,-,+	GFRA4,GFRA4,HSPA12B	-2520,-2520,66450
chr3:183598694-183599914	chr3	+	183599198	183599720	True	NM_182537,NM_018622,NM_001037639	chr3,chr3,chr3	+,-,-	HTR3D,PARL,PARL	149611,3033,3033
chr22:38882425-38882895	chr22	+	38882425	38882842	True	NM_030881,NM_001098505,NM_006855	chr22,chr22,chr22	-,-,+	DDX17,DDX17,KDELR3	1744,1744,-18395
chr4:25507635-25508027	chr4	+	25507667	25507979	True	NM_013367,NM_016955	chr4,chr4	+,-	ANAPC4,SEPSECS	-128870,-345463
chr12:85304625-85305210	chr12	+	85304640	85305200	True	NM_001146335,NM_018057,NM_182767,NM_032165	chr12,chr12,chr12,chr12	-,-,-,+	SLC6A15,SLC6A15,SLC6A15,LRRIQ1	1456,1456,1456,124898
chr20:47537728-47538331	chr20	+	47537809	47538276	True	NM_006420,NM_020820	chr20,chr20	+,-	ARFGEF2,PREX1	-2,-93389
chr19:46234328-46234733	chr19	+	46234405	46234556	True	NM_001080469,NM_017659	chr19,chr19	-,+	FBXO46,QPCTL	-254,-38715
chr16:188348-188654	chr16	+	188603	188699	True	NM_001039476,NM_001077350,NM_005332	chr16,chr16,chr16	-,-,+	NPRL3,NPRL3,HBZ	7,23,14154
chr17:29891543-29892036	chr17	+	29891549	29891959	True	NR_029710,NM_014210	chr17,chr17	+,-	MIR193A,EVI2A	-4585,-242782
chr8:146012303-146012506	chr8	+	146012326	146012510	True	NM_000973,NM_033301,NM_030580,NM_213605	chr8,chr8,chr8,chr8	-,-,-,+	RPL8,RPL8,ZNF34,ZNF517	5345,5269,265,11750
chr16:30905638-30906244	chr16	+	30905830	30906284	True	NM_001330,NM_004765,NR_031576,NM_001142544	chr16,chr16,chr16,chr16	+,-,+,+	CTF1,BCL7C,MIR762,CTF1	1643,-431,-657,1643
chr3:32539204-32540363	chr3	+	32539377	32540413	True	NM_017801,NM_181472	chr3,chr3	-,+	CMTM6,CMTM7	4041,-106273
chr3:71632507-71632850	chr3	+	71632642	71632772	True	NM_018971,NM_001012505,NM_032682	chr3,chr3,chr3	+,-,-	GPR27,FOXP1,FOXP1	170428,418,418
chr2:23682191-23683768	chr2	+	23682242	23683458	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	466528,-73995
chr5:179922091-179923052	chr5	+	179922167	179922863	True	NM_052863,NM_015455	chr5,chr5	-,+	SCGB3A1,CNOT6	95674,-801
chr1:40369639-40370268	chr1	+	40369768	40370169	True	NM_001033081,NM_001033082,NM_005376,NM_001136493	chr1,chr1,chr1,chr1	-,-,-,+	MYCL1,MYCL1,MYCL1,MFSD2A	-2081,-2081,-2081,50614
chr7:100332287-100332729	chr7	+	100332286	100332534	True	NM_173059,NM_003386,NM_022574	chr7,chr7,chr7	+,+,-	ZAN,ZAN,GIGYF1	-1088,-1088,-45416
chr4:38671368-38672761	chr4	+	38671693	38672590	True	NM_016531,NR_026804	chr4,chr4	+,-	KLF3,FLJ13197	-5955,-5444
chr14:21525313-21526057	chr14	+	21525657	21525988	True	NM_001012264,NM_138331	chr14,chr14	-,+	RNASE13,RNASE8	-22713,63
chr3:157258772-157260160	chr3	+	157258829	157259798	True	NR_024016,NM_001130001,NM_001167916,NM_001099777,NM_001130002	chr3,chr3,chr3,chr3,chr3	+,+,-,+,+	C3orf55,C3orf55,VEPH1,C3orf55,C3orf55	1360,1360,-37414,1360,1360
chr1:1215766-1216222	chr1	+	1215856	1216206	True	NR_037668,NM_194458,NM_194315,NM_194457,NM_001130413,NM_058167	chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,-,+,-	SCNN1D,UBE2J2,UBE2J2,UBE2J2,SCNN1D,UBE2J2	-5276,-6622,-6622,-6622,-5276,-6622
chr5:111189644-111190018	chr5	+	111189681	111190017	True	NM_001142476,NR_015370	chr5,chr5	-,+	C5orf13,NCRNA00219	-95766,306205
chr17:39844856-39845346	chr17	+	39844873	39845329	True	NM_005801,NM_001079870	chr17,chr17	+,-	EIF1,HAP1	9,45619
chr3:125776522-125777015	chr3	+	125776667	125777057	True	NM_001008487,NM_001012337	chr3,chr3	-,+	SLC41A3,ROPN1B	-1049,-88690
chr1:99130006-99131235	chr1	+	99130196	99131103	True	NM_001010861,NR_033716,NM_152238,NM_015976	chr1,chr1,chr1,chr1	-,+,+,+	LPPR5,SNX7,SNX7,SNX7	339408,-3023,-3023,-3023
chr19:55987069-55987799	chr19	+	55987191	55987716	True	NM_024710,NM_020378,NM_033113	chr19,chr19,chr19	-,+,+	ISOC2,NAT14,ZNF628	-14142,8840,-18
chr19:33623547-33624376	chr19	+	33623634	33623930	True	NM_173479,NM_033103	chr19,chr19	+,-	WDR88,RHPN2	-687,-67810
chr5:96444412-96444733	chr5	+	96444432	96444774	True	NM_153234,NM_175920	chr5,chr5	-,+	LIX1,LNPEP	33796,-150334
chr7:150675447-150675663	chr7	+	150675507	150675687	True	NM_000238,NM_172056,NM_000603	chr7,chr7,chr7	-,-,+	KCNH2,KCNH2,NOS3	-105,-105,12456
chr22:38203897-38204164	chr22	+	38203961	38204211	True	NM_138797,NM_014291,NM_005318,NM_001171690	chr22,chr22,chr22,chr22	-,+,+,+	ANKRD54,GCAT,H1F0,GCAT	36192,-100,-2898,-100
chr7:31617904-31618535	chr7	+	31617964	31618500	True	NM_194300,NM_022728	chr7,chr7	+,-	CCDC129,NEUROD6	-61044,-237426
chr6:27343013-27344523	chr6	+	27343138	27344442	True	NM_001076781,NR_024553,NR_002722	chr6,chr6,chr6	+,-,-	ZNF391,ZNF204P,ZNF204P	12081,15,-3834
chr17:47788449-47788711	chr17	+	47788452	47788662	True	NM_005827,NM_001199155	chr17,chr17	-,+	SLC35B1,MYST2	-3170,77318
chrX:152937821-152938064	chrX	+	152937821	152938055	True	NM_001142805,NM_001039582,NM_001135740	chrX,chrX,chrX	+,-,-	SLC6A8,PNCK,PNCK	15696,1811,738
chr2:44583651-44584537	chr2	+	44583706	44584494	True	NM_024766,NM_001171617,NM_001171613,NM_001042386,NM_001171603,NM_001042385,NM_001171606,NM_006036	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-,-,-	CAMKMT,PREPL,PREPL,PREPL,PREPL,PREPL,PREPL,PREPL	4548,4566,4265,2453,4566,2453,4265,3378
chr1:150224825-150225712	chr1	+	150224845	150225593	True	NM_012113,NM_001077628,NM_030920	chr1,chr1,chr1	+,-,-	CA14,APH1A,ANP32E	4624,15989,-16341
chr2:239112516-239112782	chr2	+	239112546	239112818	True	NM_030768,NR_026923	chr2,chr2	-,+	ILKAP,LOC643387	-222,27508
chr9:136287295-136287580	chr9	+	136287306	136287514	True	NR_024514,NM_020385,NM_139026,NM_139027,NM_139025	chr9,chr9,chr9,chr9,chr9	+,-,+,+,+	ADAMTS13,REXO4,ADAMTS13,ADAMTS13,ADAMTS13	-7898,-4142,-237,-237,-237
chr5:43192375-43193006	chr5	+	43192448	43193018	True	NM_153361,NM_001098272	chr5,chr5	+,-	MGC42105,HMGCS1	-172,120627
chr1:36408498-36409294	chr1	+	36408498	36408615	True	NM_005202,NM_177422	chr1,chr1	-,+	COL8A2,EIF2C3	157292,-11866
chr11:395643-396112	chr11	+	395810	396152	True	NM_007183,NM_001135054	chr11,chr11	+,-	PKP3,SIGIRR	-1644,18897
chr15:43557970-43559058	chr15	+	43558019	43558915	True	NM_201631,NM_001012969,NM_004245	chr15,chr15,chr15	-,+,-	TGM5,ADAL,TGM5	191,63956,191
chr22:45073853-45074081	chr22	+	45073877	45074107	True	NM_032287,NM_001198721,NM_001017528,NM_001017529,NM_001017530,NM_015366	chr22,chr22,chr22,chr22,chr22,chr22	-,+,+,+,+,+	LDOC1L,PRR5,PRR5,PRR5,PRR5,PRR5	-179872,-1240,-9501,-9501,-1240,-1240
chr1:149577502-149577956	chr1	+	149577606	149577886	True	NM_001024599,NR_024510	chr1,chr1	-,+	HIST2H2BF,LOC728855	-178377,-1204
chr1:149577502-149577956	chr1	-	147930537	147930817	False	NM_001097616,NR_027468	chr1,chr1	+,-	GPR89C,FLJ39739	-505021,1213
chr1:149577502-149577956	chr1	-	143743015	143743177	False	NR_033189,NR_027469,NR_027468	chr1,chr1,chr1	+,-,-	LOC100130000,LOC100286793,FLJ39739	-55936,1460,1330
chr1:149577502-149577956	chr1	-	144339339	144339619	False	NR_024584,NM_001037675,NR_024510,NR_024511	chr1,chr1,chr1,chr1	-,+,-,-	LOC728875,NBPF9,LOC728855,LOC728855	2186,275339,1204,1204
chr1:149577502-149577956	chr1	-	144519650	144519868	False	NR_024584,NM_001037675	chr1,chr1	-,+	LOC728875,NBPF9	2151,95090
chr14:74316587-74318087	chr14	+	74316799	74318001	True	NM_152444,NM_001146154,NM_001146155,NM_001043318	chr14,chr14,chr14,chr14	+,+,+,-	PTGR2,PTGR2,PTGR2,C14orf43	619,532,545,-62903
chr19:15562998-15563202	chr19	+	15563050	15563130	True	NR_031716,NM_021241	chr19,chr19	+,-	MIR1470,WIZ	-2742,-2288
chr15:96868685-96870105	chr15	+	96868968	96870069	True	NR_031715,NR_034095,NM_001145155,NM_001145157,NM_001145156,NM_021005	chr15,chr15,chr15,chr15,chr15,chr15	+,-,+,+,+,+	MIR1469,LOC400456,NR2F2,NR2F2,NR2F2,NR2F2	6420,-998639,138,6499,5724,4041
chr3:196264634-196266054	chr3	+	196264666	196266112	True	NM_001105573,NM_001077657	chr3,chr3	+,-	FBXO45,C3orf43	29612,-22429
chr10:52022919-52024679	chr10	+	52024635	52024726	True	NM_019893,NM_018232	chr10,chr10	-,+	ASAH2,FAM21B	-16265,-186800
chr16:84332824-84333244	chr16	+	84333048	84333248	True	NM_021197,NM_172347	chr16,chr16	+,-	WFDC1,KCNG4	-4702,-59692
chr3:23959478-23960940	chr3	+	23959510	23960674	True	NM_002948,NM_020345	chr3,chr3	+,-	RPL15,NKIRAS1	-922,-973
chr12:52717990-52719677	chr12	+	52718176	52719380	True	NM_002284,NM_002282	chr12,chr12	+,-	KRT86,KRT83	-22578,-2994
chr20:9494764-9495411	chr20	+	9494803	9495379	True	NM_012261,NM_001199897,NM_020341	chr20,chr20,chr20	+,+,-	C20orf103,C20orf103,PAK7	-20,-20,324358
chr19:44258465-44258669	chr19	+	44258552	44258628	True	NM_019108,NM_019612	chr19,chr19	-,+	C19orf61,IRGC	564,-38389
chr2:139659663-139660392	chr2	+	139659728	139660244	True	NM_007226,NR_033658	chr2,chr2	-,+	NXPH2,LOC647012	-121917,-4885
chr17:1357877-1358648	chr17	+	1357903	1358495	True	NM_005206,NM_016823,NR_028514	chr17,chr17,chr17	-,-,+	CRK,CRK,LOC100306951	1099,1099,61717
chr6:18395636-18396989	chr6	+	18395722	18396951	True	NM_182757,NM_003472	chr6,chr6	+,-	RNF144B,DEK	-8205,-130923
chr10:93567263-93567471	chr10	+	93567275	93567473	True	NM_025235,NM_152429	chr10,chr10	+,-	TNKS2,FGFBP3	-9175,101835
chr11:8961079-8962014	chr11	+	8961078	8962026	True	NM_020643,NM_020646,NM_182901	chr11,chr11,chr11	-,-,+	C11orf16,ASCL3,C11orf17	-6525,2611,-28329
chr8:30514961-30515323	chr8	+	30515027	30515324	True	NM_002095,NM_005671	chr8,chr8	-,+	GTF2E2,UBXN8	465,86365
chr14:92221991-92223687	chr14	+	92222085	92223637	True	NM_024764,NM_017437	chr14,chr14	-,+	CATSPERB,CPSF2	-23672,364660
chr2:97935983-97937831	chr2	+	97936063	97937851	True	NM_199336,NM_001164315	chr2,chr2	-,+	FAHD2B,ANKRD36	-175481,-156887
chr2:97935983-97937831	chr2	-	96495746	96495796	False	NM_207328,NR_003698	chr2,chr2	-,+	GPAT2,LOC729234	204981,180502
chr2:97935983-97937831	chr2	-	98101426	98103214	False	NM_025190,NM_001862	chr2,chr2	-,+	ANKRD36B,COX5B	103270,159306
chr11:45685111-45685390	chr11	+	45685230	45685320	True	NR_027134,NM_003654	chr11,chr11	+,-	DKFZp779M0652,CHST1	107662,1902
chr14:20102317-20103269	chr22	+	16370309	16370675	False	NM_001005239,NR_001591	chr22,chr22	-,+	OR11H1,psiTPTE22	79179,712125
chr14:20102317-20103269	chr14	+	20102533	20103069	True	NM_001197287,NM_172194	chr14,chr14	-,+	OR11H2,OR4Q3	79472,112517
chr14:58617560-58618079	chr14	+	58617597	58618062	True	NM_018477,NM_001001872	chr14,chr14	+,-	ACTR10,C14orf37	48770,835
chr2:910961-911524	chr2	+	911082	911415	True	NM_018968,NR_033880	chr2,chr2	+,-	SNTG2,LOC339822	35138,-46970
chr1:157665391-157666074	chr1	+	157665452	157666108	True	NM_018240,NM_052939	chr1,chr1	+,-	KIRREL,FCRL3	296954,4589
chr8:89339705-89339946	chr8	+	89339757	89339887	True	NM_005941,NM_003821	chr8,chr8	-,+	MMP16,RIPK2	-40,1430087
chr10:38731706-38732822	chr10	+	38731868	38731930	True	NR_027269,NR_024497	chr10,chr10	-,+	SEPT7L,LOC399744	-40088,-14846
chr5:72747564-72747991	chr5	+	72747706	72747968	True	NM_004472,NM_001037637	chr5,chr5	-,+	FOXD1,BTF3	-3354,46281
chr8:41437261-41439238	chr8	+	41437561	41438920	True	NM_152568,NM_178819	chr8,chr8	-,+	NKX6-3,AGPAT6	66015,-1905
chr4:166263916-166264887	chr4	+	166263919	166264777	True	NR_026575,NM_006745	chr4,chr4	-,+	GK3P,SC4MOL	-62744,-15153
chr5:142799642-142800287	chr5	+	142800068	142800146	True	NM_021182,NM_001018074	chr5,chr5	+,-	HMHB1,NR3C1	391579,14981
chr7:37955164-37955651	chr7	+	37955205	37955547	True	NM_003014,NM_017549	chr7,chr7	-,+	SFRP4,EPDR1	1028,4615
chr17:46894735-46895659	chr17	+	46894881	46895655	True	NM_005831,NM_001130918	chr17,chr17	+,-	CALCOCO2,TTLL6	12716,-412
chrX:15351725-15352221	chrX	+	15351890	15352242	True	NR_033835,NR_033836,NM_020473,NM_002641,NM_203281	chrX,chrX,chrX,chrX,chrX	-,-,-,-,+	PIGA,PIGA,PIGA,PIGA,BMX	1484,1484,1484,1484,166657
chr2:46738010-46739439	chr2	+	46738195	46739372	True	NM_080653,NM_001145051,NM_012249	chr2,chr2,chr2	-,+,+	ATP6V1E2,LOC388946,RHOQ	7774,-31542,30494
chrY:19995129-19995345	chrY	+	19995128	19995193	True	NM_004825,NM_001001722	chrY,chrY	-,-	CDY2A,CDY2B	-3028,-3029
chrY:19995129-19995345	chrY	-	20134573	20134638	False	NM_004825,NM_001001722	chrY,chrY	+,+	CDY2A,CDY2B	3028,3029
chrY:19995129-19995345	chrY	+	26197174	26197239	False	NM_004680,NM_001003895,NM_001003894,NR_001526,NM_170723	chrY,chrY,chrY,chrY,chrY	-,-,-,+,-	CDY1,CDY1B,CDY1B,TTTY17A,CDY1	-3013,-3013,-3013,434239,-3013
chrY:19995129-19995345	chrY	-	27765185	27765250	False	NM_004680,NR_002179,NM_001003895,NM_001003894,NM_170723	chrY,chrY,chrY,chrY,chrY	+,-,+,+,+	CDY1,TTTY17C,CDY1B,CDY1B,CDY1	3013,-434265,3013,3013,3013
chr4:49322925-49323254	chr4	+	49322950	49323214	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-334736,-414135
chr4:49322925-49323254	chr4	+	49316795	49316849	False	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-328581,-407980
chr5:849497-849716	chr5	+	849525	849691	True	NM_001166260,NM_024786	chr5,chr5	+,-	TRIP13,ZDHHC11	43277,1460
chr5:849497-849716	chr5	+	756805	756855	False	NM_001166260,NM_007030	chr5,chr5	+,-	TRIP13,TPPP	136113,-63295
chr9:139292933-139293331	chr9	+	139293131	139293371	True	NM_003086,NM_015160	chr9,chr9	-,+	SNAPC4,PMPCA	-242,11744
chr1:18433919-18434260	chr1	+	18433986	18434308	True	NM_032880,NM_018715	chr1,chr1	+,-	IGSF21,RCC2	63,-667766
chr22:39916306-39916545	chr22	+	39916309	39916433	True	NM_194326,NM_182810,NM_001675	chr22,chr22,chr22	-,+,+	RPS19BP1,ATF4,ATF4	12477,135,135
chr20:62599981-62600451	chr20	+	62599980	62600144	True	NM_012469,NM_020713	chr20,chr20	+,-	PRPF6,ZNF512B	12286,1124
chr6:53898356-53899670	chr6	+	53898364	53899708	True	NM_138569,NM_001003760	chr6,chr6	+,-	C6orf142,KLHL31	-14701,-367858
chr17:17589933-17590295	chr17	+	17590073	17590221	True	NM_030665,NR_024007	chr17,chr17	+,-	RAI1,SMCR5	-5337,92672
chr6:138188759-138189135	chr6	+	138188783	138189085	True	NM_006290,NM_022121	chr6,chr6	+,-	TNFAIP3,PERP	-253,239625
chr7:148282594-148283040	chr7	+	148282720	148283034	True	NM_145304,NM_001203249	chr7,chr7	+,-	C7orf33,EZH2	4622,297617
chr16:67234150-67234513	chr16	+	67234153	67234437	True	NM_001950,NM_024712,NR_029887	chr16,chr16,chr16	+,+,-	E2F4,ELMO3,MIR328	-8136,-1176,1911
chr2:132233197-132233483	chr2	+	132233199	132233481	True	NM_001085365,NM_080386	chr2,chr2	-,+	MZT2A,TUBA3D	16633,184
chrX:38169918-38171801	chrX	+	38169984	38171824	True	NM_000328,NM_000531	chrX,chrX	-,+	RPGR,OTC	15018,39911
chr10:49370886-49371873	chr10	+	49371000	49371914	True	NR_033172,NM_002750	chr10,chr10	-,+	FRMPD2P1,MAPK8	11376,237772
chr10:49370886-49371873	chr10	+	46663533	46664383	False	NR_027632,NM_015605	chr10,chr10	+,-	FAM35B,PTPN20B	233257,-22530
chr10:49370886-49371873	chr10	+	48850433	48851283	False	NR_033172,NM_153034	chr10,chr10	-,+	FRMPD2P1,ZNF488	11463,-495405
chr7:6654790-6655014	chr7	+	6654792	6654864	True	NM_017560,NM_001145118	chr7,chr7	+,-	ZNF853,GRID2IP	662,-63725
chr22:38433969-38434384	chr22	+	38433974	38434335	True	NM_013356,NM_001039583	chr22,chr22	-,+	SLC16A8,PICK1	44885,18926
chr10:118962304-118963341	chr10	+	118962727	118963015	True	NR_037436,NM_181840	chr10,chr10	-,+	MIR3663,KCNK18	-35442,-5778
chrY:22738045-22739436	chrY	+	22738091	22739040	True	NM_004681,NR_001542	chrY,chrY	+,-	EIF1AY,TTTY10	-536,-56977
chr9:130566791-130568158	chr9	+	130566928	130568203	True	NM_001018078,NM_170600,NM_004957	chr9,chr9,chr9	+,-,+	FPGS,SH2D3C,FPGS	-1471,-25880,-1825
chr5:122184327-122185063	chr5	+	122184617	122185089	True	NM_000943,NM_014035	chr5,chr5	-,+	PPIC,SNX24	187386,-3523
chr8:7983082-7983664	chr8	+	7983400	7983469	True	NR_031689,NR_024362	chr8,chr8	-,+	MIR548I3,FLJ10661	-36789,102622
chr8:7983082-7983664	chr8	-	7019055	7019124	False	NR_027000,NM_001164452	chr8,chr8	-,+	LOC349196,FAM90A14	101950,95301
chr11:67572084-67572567	chr11	+	67572205	67572587	True	NM_007103,NR_024249	chr11,chr11	+,-	NDUFV1,LOC645332	-197933,270
chr9:123692316-123692931	chr9	+	123692522	123692938	True	NM_001190945,NR_024408,NM_005658	chr9,chr9,chr9	-,+,-	TRAF1,LOC253039,TRAF1	-1071,-87253,-3349
chr3:32727725-32729034	chr3	+	32727858	32728751	True	NM_016141,NM_015442	chr3,chr3	-,+	DYNC1LI1,CNOT10	-115492,-1220
chr4:102759272-102761216	chr4	+	102759648	102760857	True	NM_001083907,NM_001135148	chr4,chr4	+,-	BANK1,SLC39A8	-24723,484672
chr17:55335977-55337851	chr17	+	55336684	55337691	True	NM_004645,NM_138962,NM_170721	chr17,chr17,chr17	-,+,+	COIL,MSI2,MSI2	-298273,-2804,-2361
chr2:31359934-31360324	chr2	+	31359936	31360310	True	NM_014600,NM_024572	chr2,chr2	+,-	EHD3,GALNT14	96569,1311
chr18:47023803-47024269	chr18	+	47024091	47024273	True	NM_001199356,NM_001199340,NM_001199343,NM_001199342,NM_001199345,NM_001199344,NR_031720,NM_001035006,NM_000985,NM_001199355,NR_002571,NR_002572,NR_002573,NR_003701,NM_001199341	chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18	-,-,-,-,-,-,+,-,-,-,-,-,-,-,-	RPL17-C18ORF32,RPL17,RPL17,RPL17,RPL17,RPL17,MIR1539,RPL17,RPL17,RPL17-C18ORF32,SNORD58A,SNORD58B,U58,SNORD58C,RPL17	-5156,-5156,-5257,-5257,-5156,-5257,-10412,-5156,-5156,-6137,-6374,-5992,-8413,-8397,-5257
chr1:149280126-149280734	chr1	+	149280131	149280636	True	NM_001024599,NR_027002	chr1,chr1	-,+	HIST2H2BF,LOC388692	118654,-706
chr1:149280126-149280734	chr1	+	149665701	149666125	False	NM_001161334,NM_000566	chr1,chr1	-,+	HIST2H2BF,FCGR1A	117853,88124
chr5:78279880-78280439	chr5	+	78279931	78280331	True	NM_000046,NM_001178005,NM_198709	chr5,chr5,chr5	-,+,-	ARSB,BHMT2,ARSB	2076,85215,1485
chr21:45193982-45194469	chr21	+	45193995	45194427	True	NM_000100,NM_003683	chr21,chr21	-,+	CSTB,RRP1	1882,14990
chr1:41488299-41488504	chr1	+	41488324	41488542	True	NR_037868,NM_144990,NM_001168247	chr1,chr1,chr1	+,-,-	LOC100507178,SLFNL1,SLFNL1	-8113,-897,-927
chr20:25387024-25387244	chr20	+	25387122	25387256	True	NM_021067,NM_001042472	chr20,chr20	+,-	GINS1,ABHD12	1066,-15504
chr4:95371587-95371934	chr4	+	95371680	95371811	True	NM_001011513,NM_001011516,NM_001011515,NM_014485,NM_006457,NR_024179	chr4,chr4,chr4,chr4,chr4,chr4	+,+,+,-,+,+	PDLIM5,PDLIM5,PDLIM5,HPGDS,PDLIM5,PDLIM5	1226,1226,1226,-107653,1226,1226
chr5:94619059-94619361	chr5	+	94619089	94619403	True	NM_152548,NM_024717	chr5,chr5	+,-	FAM81B,MCTP1	107644,926
chr17:30228748-30229156	chr17	+	30228754	30229105	True	NM_015355,NM_018428	chr17,chr17	+,-	SUZ12,UTP6	34938,-25
chr15:74904473-74905273	chr15	+	74904622	74905226	True	NM_001130028,NM_003992,NM_001142443	chr15,chr15,chr15	+,+,-	CLK3,CLK3,EDC3	2108,-3960,83210
chr5:83641794-83642052	chr5	+	83641797	83641947	True	NM_005711,NM_004385	chr5,chr5	-,+	EDIL3,VCAN	38718,-874359
chr6:26452162-26452495	chr6	+	26452271	26452357	True	NM_001197233,NM_001197234,NM_078476,NM_003543,NM_007049	chr6,chr6,chr6,chr6,chr6	+,+,+,-,+	BTN2A1,BTN2A1,BTN2A1,HIST1H4H,BTN2A1	5820,5795,5795,-166544,5795
chr3:72885562-72886123	chr3	+	72885692	72886140	True	NM_001080393,NM_018130	chr3,chr3	+,-	GXYLT2,SHQ1	51244,11508
chr4:123113391-123115108	chr4	+	123113497	123114961	True	NM_001130698,NM_015312	chr4,chr4	-,+	TRPC3,KIAA1109	-240588,-21799
chr1:170501718-170502724	chr1	+	170501728	170502694	True	NM_001146039,NM_152281,NR_027397,NR_026957	chr1,chr1,chr1,chr1	+,+,+,-	GORAB,GORAB,GORAB,LOC284688	-516,-516,-516,-248379
chr12:7281492-7282079	chr12	+	7281715	7282117	True	NM_014718,NM_031491	chr12,chr12	+,-	CLSTN3,RBP5	849,-249
chr14:45365553-45366274	chr14	+	45365627	45366266	True	NM_017658,NM_001017923	chr14,chr14	-,+	KLHL28,C14orf28	64963,240
chr19:37724622-37725381	chr19	+	37724637	37725285	True	NM_152279,NM_152604	chr19,chr19	-,+	ZNF585B,ZNF383	-23186,-7327
chr5:112335730-112337342	chr5	+	112336274	112337301	True	NM_005669,NM_152624	chr5,chr5	-,+	REEP5,DCP2	-78243,-23899
chr1:15272705-15272924	chr1	+	15272705	15272811	True	NM_001017999,NR_027136	chr1,chr1	+,-	KAZN,C1orf126	-341,206199
chr3:52233443-52234039	chr3	+	52233448	52233714	True	NM_017442,NM_199166,NM_000688	chr3,chr3,chr3	-,+,+	TLR9,ALAS1,ALAS1	26515,-1383,-1355
chr13:48877069-48877589	chr13	+	48877249	48877495	True	NM_000321,NM_001162498	chr13,chr13	+,-	RB1,LPAR6	387,110208
chr11:2904494-2905049	chr11	+	2904555	2904967	True	NR_024627,NM_000076,NM_001122631,NM_001122630	chr11,chr11,chr11,chr11	+,-,-,-	KCNQ1DN,CDKN1C,CDKN1C,CDKN1C	-13343,2084,2084,2084
chr20:31263435-31264058	chr20	+	31263435	31264059	True	NM_006892,NM_182584	chr20,chr20	+,-	DNMT3B,C20orf203	86131,-23652
chr2:232572767-232572973	chr2	+	232572896	232572994	True	NM_001099285,NR_036052,NR_036263,NR_036262,NM_002823,NM_002601	chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,+,-	PTMA,MIR1244-1,MIR1244-3,MIR1244-2,PTMA,PDE6D	240,5029,5029,5029,240,73030
chr2:55844370-55844611	chr2	+	55844371	55844581	True	NM_080667,NM_020463,NM_001122964	chr2,chr2,chr2	+,-,-	CCDC104,SMEK2,SMEK2	-97682,265,265
chr6:41863786-41864618	chr6	+	41863786	41864554	True	NM_018561,NM_004053	chr6,chr6	-,+	USP49,BYSL	-687,24410
chr12:132514264-132514488	chr12	+	132514324	132514536	True	NM_175066,NR_002979	chr12,chr12	-,+	DDX51,SNORA49	114394,1232
chr19:53694195-53696007	chr19	+	53694295	53695801	True	NM_024733,NM_173856	chr19,chr19	-,+	ZNF665,VN1R2	868,65743
chr5:16931302-16931609	chr5	+	16931406	16931634	True	NM_012334,NM_006317	chr5,chr5	-,+	MYO10,BASP1	4801,286115
chr15:30115693-30116500	chr15	+	30115789	30115869	True	NM_003257,NR_026859,NM_175610	chr15,chr15,chr15	-,+,-	TJP1,FAM7A3,TJP1	-1083,280065,-1083
chr7:56176432-56177899	chr7	+	56176748	56177463	True	NM_015411,NM_016139,NM_001145712	chr7,chr7,chr7	+,-,-	SUMF2,CHCHD2,LOC389493	-44895,-2561,6686
chr6:27099455-27099789	chr6	+	27099584	27099838	True	NM_021064,NM_003495,NM_021058	chr6,chr6,chr6	+,+,-	HIST1H2AG,HIST1H4I,HIST1H2BJ	978,7249,787
chr16:88872174-88872540	chr16	+	88872210	88872534	True	NM_000485,NM_001030018,NM_030928	chr16,chr16,chr16	-,-,+	APRT,APRT,CDT1	5858,5858,-2075
chr5:1593508-1593977	chr5	+	1593804	1593880	True	NR_003263,NM_004553	chr5,chr5	-,+	SDHAP3,NDUFS6	816,207615
chr5:1593508-1593977	chr5	-	236063	236139	False	NM_004168,NM_145265	chr5,chr5	+,-	SDHA,CCDC127	-17758,-17766
chr5:40835819-40836233	chr5	+	40835827	40836031	True	NM_032587,NR_002583,NR_037665,NM_000997	chr5,chr5,chr5,chr5	+,-,-,-	CARD6,SNORD72,LOC100506548,RPL37	5378,-2990,-6583,-440
chr7:138793306-138793568	chr7	+	138793341	138793597	True	NM_024625,NM_001144920,NM_020119	chr7,chr7,chr7	-,+,-	ZC3HAV1,TTC26,ZC3HAV1	918,24892,918
chrX:148713198-148713436	chrX	+	148713202	148713378	True	NM_001011544,NM_001174092,NM_032508	chrX,chrX,chrX	+,-,-	MAGEA11,TMEM185A,TMEM185A	56524,159,159
chr20:17663678-17664283	chr20	+	17663682	17664276	True	NM_001042576,NM_001159495,NM_004587	chr20,chr20,chr20	-,+,-	RRBP1,BANF2,RRBP1	-754,10043,-754
chr20:25177200-25177411	chr20	+	25177244	25177462	True	NR_027091,NM_001114089,NM_001247	chr20,chr20,chr20	-,+,+	LOC284798,ENTPD6,ENTPD6	-47818,-956,-956
chr22:35855315-35855797	chr22	+	35855330	35855834	True	NM_005368,NM_006739	chr22,chr22	-,+	MB,MCM5	157600,-59265
chr17:1468231-1469438	chr17	+	1468982	1469456	True	NM_006224,NR_028514	chr17,chr17	-,+	PITPNA,LOC100306951	-2872,-48834
chr20:23127193-23128717	chr20	+	23127444	23128698	True	NR_034149,NM_001052	chr20,chr20	-,+	LOC200261,SSTR4	-14171,-111438
chr11:47663682-47663897	chr11	+	47663813	47663881	True	NM_014342,NM_001164379	chr11,chr11	-,+	MTCH2,FAM180B	375,-55634
chr11:57311368-57311600	chr11	+	57311480	57311540	True	NM_012456,NM_001105565	chr11,chr11	-,+	TIMM10,SMTNL1	-13248,-1417
chr8:86132609-86132972	chr8	+	86132621	86132965	True	NM_001099672,NM_001099673,NM_001099670,NM_001099671,NM_198584	chr8,chr8,chr8,chr8,chr8	-,-,-,-,+	C8orf59,C8orf59,C8orf59,C8orf59,CA13	22,22,22,22,24750
chr4:153701679-153702215	chr4	+	153701686	153702258	True	NM_001025595,NM_014447,NM_145720,NM_001025593	chr4,chr4,chr4,chr4	+,+,-,+	ARFIP1,ARFIP1,TIGD4,ARFIP1	-625,-625,-770,-625
chr3:49201938-49203314	chr3	+	49202085	49203129	True	NM_173546,NM_022903	chr3,chr3	+,-	KLHDC8B,CCDC71	5888,714
chr1:187463935-187465369	chr1	+	187464224	187465115	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-814665,-666244
chr2:220032925-220033490	chr2	+	220033010	220033308	True	NM_015680,NM_024782,NM_001144890,NM_144712,NM_001144889,NM_024293	chr2,chr2,chr2,chr2,chr2,chr2	-,-,-,-,-,+	CNPPD1,NHEJ1,SLC23A3,SLC23A3,SLC23A3,FAM134A	8444,-7423,1559,1559,1559,9630
chr9:134581436-134582152	chr9	+	134581461	134582121	True	NM_007171,NM_198679	chr9,chr9	+,-	POMT1,RAPGEF1	-203223,3158
chr9:71151924-71152229	chr9	+	71151927	71152225	True	NM_153237,NM_003558	chr9,chr9	-,+	C9orf71,PIP5K1B	3608,168390
chr11:45902703-45902972	chr11	+	45902711	45903013	True	NM_005456,NM_001080446	chr11,chr11	+,-	MAPK8IP1,C11orf94	4188,25870
chr10:1574934-1575213	chr10	+	1574936	1575260	True	NR_033387,NM_018702	chr10,chr10	+,-	NCRNA00168,ADARB2	-6162,204508
chr7:56663936-56665602	chr7	+	56664266	56665525	True	NR_029420,NR_026929	chr7,chr7	-,+	LOC650226,DKFZp434L192	-148198,-100402
chr19:14063668-14064688	chr19	+	14063775	14064666	True	NM_138353,NM_001146255,NM_001146254	chr19,chr19,chr19	+,-,-	DCAF15,PODNL1,PODNL1	-507,57,57
chr3:49227214-49228019	chr3	+	49227252	49227794	True	NM_001080528,NM_178173,NM_001135197	chr3,chr3,chr3	-,+,+	LOC646498,CCDC36,CCDC36	1547,8066,9138
chr16:21530783-21531029	chr16	+	21530784	21531074	True	NM_001077180,NR_002594	chr16,chr16	+,-	METTL9,SLC7A5P2	79781,741
chr16:21530783-21531029	chr16	+	29624059	29624349	False	NR_002593,NM_001030288	chr16,chr16	-,+	SLC7A5P1,SPN	739,49950
chr17:61553024-61553397	chr17	+	61553107	61553169	True	NM_152830,NM_001915,NM_000789,NM_001178057	chr17,chr17,chr17,chr17	+,-,+,+	ACE,CYB561,ACE,ACE	9008,-29385,1252,9008
chr12:72667548-72667942	chr12	+	72667597	72667939	True	NR_026837,NR_026836,NM_013381	chr12,chr12,chr12	-,-,+	LOC283392,LOC283392,TRHDE	-308,-308,-1119
chr6:88877390-88879286	chr6	+	88877464	88879259	True	NM_001160259,NM_001160258,NM_001160226,NM_030960,NM_016083	chr6,chr6,chr6,chr6,chr6	-,-,-,+,-	CNR1,CNR1,CNR1,SPACA1,CNR1	-1697,-1697,-1697,-120011,-1697
chr1:200383052-200384028	chr1	+	200383399	200383859	True	NM_001105517,NM_012482	chr1,chr1	+,-	FAM58B,ZNF281	-200800,-4233
chr18:70536899-70537469	chr18	+	70537206	70537464	True	NM_014177,NM_138999,NM_001201465,NM_138966	chr18,chr18,chr18,chr18	+,-,-,-	C18orf55,NETO1,NETO1,NETO1	1278281,-4272,-2396,-2396
chr1:227136913-227138735	chr1	+	227136991	227138639	True	NM_020247,NM_002221	chr1,chr1	+,-	ADCK3,ITPKB	-9104,-210115
chr14:35511501-35511754	chr14	+	35511605	35511746	True	NM_001079519,NM_017917,NM_173607	chr14,chr14,chr14	+,-,+	FAM177A1,PPP2R3C,FAM177A1	2366,79834,3863
chr11:119252492-119253529	chr11	+	119252512	119253229	True	NM_004205,NR_034160	chr11,chr11	-,+	USP2,LOC100499227	-76,-75
chrX:19988934-19989494	chrX	+	19988985	19989550	True	NM_001173456,NM_198279	chrX,chrX	+,-	PDHA1,CXorf23	-627033,-603
chr2:241373365-241373990	chr2	+	241373438	241373980	True	NR_024014,NM_002081	chr2,chr2	-,+	PP14571,GPC1	22187,1134
chr1:64241113-64242357	chr1	+	64241188	64242394	True	NM_001083592,NM_014288,NM_005012	chr1,chr1,chr1	+,-,+	ROR1,ITGB3BP,ROR1	-1549,-252353,-1549
chr6:24360229-24362077	chr6	+	24360509	24362109	True	NM_016356,NM_181337	chr6,chr6	-,+	DCDC2,KAAG1	-2229,-3429
chr22:21273304-21274048	chr22	+	21273333	21274066	True	NM_058004,NM_005207	chr22,chr22	-,+	PI4KA,CRKL	-60263,-1670
chr10:99529175-99530850	chr10	+	99529258	99530684	True	NM_003015,NM_001002261	chr10,chr10	-,+	SFRP5,ZFYVE27	1122,-31081
chr3:100224055-100225214	chr3	+	100224125	100225043	True	NM_014820,NM_018004	chr3,chr3	-,+	TOMM70A,TMEM45A	-103900,-12720
chr1:4041613-4041984	chr1	+	4041615	4041917	True	NR_024455,NM_207356	chr1,chr1	+,-	LOC100133612,C1orf174	-224698,-224758
chr9:129090541-129092211	chr9	+	129090559	129092021	True	NM_001006618,NM_001011703,NM_033446	chr9,chr9,chr9	-,+,+	MAPKAP1,FAM125B,FAM125B	-621046,-1484,-1484
chr19:634423-634696	chr19	+	634447	634559	True	NM_005035,NM_020637	chr19,chr19	-,+	POLRMT,FGF22	-879,5366
chr16:69785819-69786691	chr16	+	69785977	69786538	True	NM_014062,NM_199423,NM_007014	chr16,chr16,chr16	-,+,+	NOB1,WWP2,WWP2	2348,9735,9735
chr12:122985154-122985422	chr12	+	122985180	122985416	True	NM_014708,NM_017612	chr12,chr12	+,-	KNTC1,ZCCHC8	26392,152
chr7:149534559-149534845	chr7	+	149534763	149534891	True	NM_001099220,NR_027040	chr7,chr7	+,-	ZNF862,LOC401431	617,36110
chr19:7460246-7460474	chr19	+	7460288	7460358	True	NR_024491,NM_015318	chr19,chr19	-,+	LOC100128573,ARHGEF18	77939,-340
chr19:13055827-13056050	chr19	+	13055826	13056038	True	NM_005053,NM_004461,NM_004343	chr19,chr19,chr19	+,-,+	RAD23A,FARSA,CALR	615,-11268,-6463
chr16:65262348-65263999	chr16	+	65262368	65263564	True	NM_001795,NM_001797	chr16,chr16	+,-	CDH5,CDH11	1136960,-106449
chr3:178789779-178790318	chr3	+	178789871	178790367	True	NM_152240,NM_022470,NM_006218	chr3,chr3,chr3	-,-,+	ZMAT3,ZMAT3,PIK3CA	-215,-215,75943
chr20:45176966-45177486	chr20	+	45176976	45177520	True	NM_030777,NM_080721	chr20,chr20	+,-	SLC2A10,C20orf123	160758,1743
chr19:4120058-4121031	chr19	+	4120187	4120946	True	NM_030662,NM_032607	chr19,chr19	-,+	MAP2K2,CREB3L3	3230,32682
chr22:42468719-42469698	chr22	+	42468732	42469566	True	NM_000262,NM_001002034,NM_033318	chr22,chr22,chr22	-,+,+	NAGA,FAM109B,C22orf32	-1886,688,6132
chr12:5402312-5402731	chr12	+	5402331	5402771	True	NM_006422,NM_001102654	chr12,chr12	-,+	AKAP3,NTF3	-647988,138508
chr10:32218449-32218789	chr10	+	32218448	32218808	True	NM_001026383,NM_018287	chr10,chr10	+,-	CCDC7,ARHGAP12	516232,-678
chr14:70076169-70077610	chr14	+	70076170	70077532	True	NR_024630,NM_014734	chr14,chr14	-,+	C14orf162,KIAA0247	-38252,777
chr5:169930888-169931095	chr5	+	169931073	169931143	True	NM_001034837,NM_004137,NM_014592	chr5,chr5,chr5	+,-,+	KCNIP1,KCNMB1,KCNIP1	-76,-114435,-76
chr16:56994590-56994840	chr16	+	56994590	56994846	True	NM_000078,NM_024946	chr16,chr16	+,-	CETP,FAM192A	988,225180
chrX:129243060-129243741	chrX	+	129243088	129243672	True	NM_001127197,NM_001421,NM_004794	chrX,chrX,chrX	-,-,+	ELF4,ELF4,RAB33A	1066,853,62100
chr16:10277311-10277666	chr16	+	10277320	10277714	True	NM_024997,NM_001134408,NM_001134407,NM_000833	chr16,chr16,chr16,chr16	+,-,-,-	ATF7IP2,GRIN2A,GRIN2A,GRIN2A	245010,-1396,-1057,-709
chr14:77646876-77647564	chr14	+	77647000	77647574	True	NM_174976,NM_020431	chr14,chr14	-,+	ZDHHC22,TMEM63C	-38866,527
chr9:139690589-139692049	chr9	+	139690599	139691739	True	NM_001039374,NM_032928,NR_024580	chr9,chr9,chr9	+,+,-	KIAA1984,TMEM141,LOC100131193	28,-4873,11611
chr13:37484301-37485735	chr13	+	37484382	37485748	True	NM_001127217,NM_005905,NM_181503	chr13,chr13,chr13	-,-,+	SMAD9,SMAD9,EXOSC8	8711,8711,88929
chr16:22380486-22381005	chr16	+	22380648	22381017	True	NM_001802,NR_027154	chr16,chr16	-,+	CDR2,LOC641298	4980,67311
chr19:43862724-43863059	chr19	+	43862859	43863087	True	NM_020406,NR_026881,NM_002784	chr19,chr19,chr19	+,+,-	CD177,PRG1,PSG9	-5085,-9702,-89177
chr19:43862724-43863059	chr19	-	43879996	43880224	False	NM_031451,NM_014400	chr19,chr19	+,-	TEX101,LYPD3	12538,89657
chr5:37379286-37379514	chr5	+	37379286	37379520	True	NM_153485,NM_018034,NM_004298	chr5,chr5,chr5	-,+,-	NUP155,WDR70,NUP155	-8089,1,-8399
chr15:52027575-52028628	chr15	+	52027712	52028586	True	NM_153374,NM_001142885	chr15,chr15	-,+	LYSMD2,TMOD2	1784,15171
chr19:13082698-13083513	chr19	+	13083250	13083328	True	NM_152654,NM_052850	chr19,chr19	+,-	DAND5,GADD45GIP1	-2869,-15200
chr1:150774105-150774608	chr1	+	150774299	150774442	True	NM_000396,NM_001145415	chr1,chr1	-,+	CTSK,SETDB1	6530,124372
chr14:89190334-89191696	chr14	+	89190784	89191311	True	NM_183387,NM_144596	chr14,chr14	-,+	EML5,TTC8	67836,99666
chr15:69450590-69451448	chr15	+	69450597	69451241	True	NM_006305,NM_015554	chr15,chr15	-,+	ANP32A,GLCE	-337336,1731
chr17:79649842-79650105	chr17	+	79649882	79650080	True	NM_001040025,NM_004712	chr17,chr17	-,+	ARL16,HGS	924,881
chr12:48493032-48494268	chr12	+	48493235	48494142	True	NM_014554,NM_001166686	chr12,chr12	-,+	SENP1,PFKM	5558,5513
chr11:57089305-57090178	chr11	+	57089334	57090109	True	NM_002559,NM_033396	chr11,chr11	+,-	P2RX3,TNKS1BP1	15839,2355
chr1:95582327-95582698	chr1	+	95582330	95582738	True	NM_001199691,NM_152487,NM_144988	chr1,chr1,chr1	+,+,-	TMEM56-RWDD3,TMEM56,ALG14	740,155,-43823
chr5:156277596-156277914	chr5	+	156277712	156277926	True	NM_001146726,NR_002168	chr5,chr5	-,+	TIMD4,PPP1R2P3	112390,-214
chr3:57116064-57117000	chr3	+	57116111	57116680	True	NM_181727,NM_001128615	chr3,chr3	+,-	SPATA12,ARHGEF3	-21693,-2775
chr6:114287218-114287638	chr6	+	114287217	114287436	True	NM_001527,NR_027060,NR_033441	chr6,chr6,chr6	-,+,-	HDAC2,FLJ34503,HDAC2	4980,-61723,4980
chr8:135725758-135727355	chr8	+	135725777	135727364	True	NM_020863,NR_002438,NM_001174157	chr8,chr8,chr8	-,+,-	ZFAT,ZFAT-AS1,ZFAT	-485,-115514,-485
chr1:4717808-4718553	chr1	+	4717818	4718568	True	NM_018836,NM_001042478,NM_207356	chr1,chr1,chr1	+,+,-	AJAP1,AJAP1,C1orf174	-2764,-2764,-900961
chr5:172662211-172663217	chr5	+	172662298	172663163	True	NM_004387,NM_013980,NM_001166175,NM_001166176	chr5,chr5,chr5,chr5	-,+,-,-	NKX2-5,BNIP1,NKX2-5,NKX2-5	15,-90904,15,15
chr22:22090885-22091660	chr22	+	22090903	22091496	True	NM_013313,NM_148176	chr22,chr22	-,+	YPEL1,PPIL2	-832,-70683
chr6:128126623-128128427	chr6	+	128127044	128128147	True	NM_001010923,NM_001010905	chr6,chr6	-,+	THEMIS,C6orf58	94129,-228784
chr3:23242921-23243914	chr3	+	23243010	23243773	True	NM_020345,NM_152653	chr3,chr3	-,+	NKIRAS1,UBE2E2	714815,1010
chr3:51812698-51812950	chr3	+	51812701	51812991	True	NM_001085479,NM_001143833	chr3,chr3	+,-	IQCF3,IQCF6	49577,262
chr19:15075922-15077023	chr19	+	15076289	15076930	True	NM_005071,NM_012377	chr19,chr19	-,+	SLC1A6,OR7C2	6852,-24046
chr6:144479368-144480337	chr6	+	144479375	144480358	True	NM_031287,NM_003764	chr6,chr6	-,+	SF3B5,STX11	-62621,-7772
chr16:30573625-30574008	chr16	+	30573660	30573720	True	NM_001172679,NM_024031,NM_033410	chr16,chr16,chr16	-,+,-	ZNF764,PRR14,ZNF764	-4018,88520,-4018
chr1:210127693-210128209	chr1	+	210127693	210128053	True	NR_027459,NM_006147	chr1,chr1	+,-	SYT14,IRF6	-16212,-148214
chr15:31174031-31175503	chr15	+	31174345	31175285	True	NM_017762,NM_001146095	chr15,chr15	-,+	MTMR10,FAN1	108572,20769
chr4:56821804-56822867	chr4	+	56821869	56822774	True	NM_006681,NM_025009	chr4,chr4	-,+	NMU,CEP135	-319404,-6890
chr15:94941724-94942288	chr15	+	94941837	94942329	True	NM_001159644,NR_034095	chr15,chr15	+,-	MCTP2,LOC400456	-42726,928050
chrX:52984944-52985359	chrX	+	52984979	52985268	True	NM_014138,NM_001099684	chrX,chrX	-,-	FAM156A,FAM156B	965,418
chrX:52984944-52985359	chrX	-	52928769	52929058	False	NM_014138,NM_133179,NM_001099684	chrX,chrX,chrX	+,-,+	FAM156A,XAGE3,FAM156B	-965,-31650,-418
chr10:47079870-47080593	chr10	+	47079990	47080554	True	NR_003277,NM_005972	chr10,chr10	-,+	LOC728643,PPYR1	53332,2979
chrX:51239656-51240057	chrX	+	51239661	51239993	True	NM_018159,NM_153183	chrX,chrX	-,+	NUDT11,NUDT10	-202,-164629
chr11:60262624-60263310	chr11	+	60262834	60263352	True	NM_022349,NM_017716,NM_001164470	chr11,chr11,chr11	-,+,+	MS4A6A,MS4A12,MS4A12	-312160,-2641,-2641
chr16:67529871-67530427	chr16	+	67529945	67530199	True	NM_001138,NM_024519	chr16,chr16	-,+	AGRP,FAM65A	-12229,32517
chr20:26040477-26040906	chr20	+	26040494	26040954	True	NR_003678,NR_026713	chr20,chr20	-,+	C20orf191,FAM182A	53773,-5295
chr20:26040477-26040906	chr20	-	25776222	25776682	False	NR_004846,NR_027061,NR_026714	chr20,chr20,chr20	+,-,-	LOC100134868,FAM182B,FAM182B	213752,246,5295
chr7:64612025-64613082	chr7	+	64612163	64612695	True	NR_027393,NM_001007253	chr7,chr7	+,-	INTS4L1,ERV3	-10611,-145039
chr7:64612025-64613082	chr7	+	65123420	65123918	False	NM_000181,NR_027392	chr7,chr7	-,+	GUSB,INTS4L2	323445,-10705
chr7:64612025-64613082	chr7	-	65008562	65009060	False	NM_000181,NR_027392	chr7,chr7	-,+	GUSB,INTS4L2	438302,103716
chr7:64612025-64613082	chr11	-	77667813	77668344	False	NM_003251,NM_033547	chr11,chr11	+,-	THRSP,INTS4	106562,37423
chr19:9247357-9247889	chr19	+	9247363	9247440	True	NM_001190791,NM_020933,NM_001001958	chr19,chr19,chr19	+,+,-	ZNF317,ZNF317,OR7G3	3615,3615,-9737
chr15:25449927-25450188	chr15	+	25449997	25450229	True	NR_003315,NR_003314,NR_003313,NR_003312,NR_003311,NR_003310,NR_022010,NR_003495,NR_003308,NR_003309,NM_130838,NR_003306,NR_003307	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,+,-,+,+	SNORD115-23,SNORD115-22,SNORD115-21,SNORD115-20,SNORD115-19,SNORD115-18,PAR4,SNORD115-24,SNORD115-16,SNORD115-17,UBE3A,SNORD115-14,SNORD115-15	6713,4835,1179,1179,-544,-544,6609,8576,-5453,-544,200474,-9980,1179
chr20:61296617-61297658	chr20	+	61296639	61297595	True	NM_016354,NR_024470	chr20,chr20	+,-	SLCO4A1,LOC100127888	-22893,428
chr3:57682258-57683687	chr3	+	57682443	57683138	True	NM_007159,NM_152678	chr3,chr3	+,-	SLMAP,FAM116A	60035,-3627
chr20:62737212-62737701	chr20	+	62737252	62737648	True	NM_001200019	chr20	+	OPRL1	-20934
chr15:66788280-66788658	chr15	+	66788440	66788538	True	NM_006049,NM_000968,NR_003105,NR_002440,NR_002441,NR_002442,NR_002443,NM_017975	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,+,-,-,-,-,+	SNAPC5,RPL4,ZWILCH,SNORD16,SNORD18A,SNORD18B,SNORD18C,ZWILCH	1658,8696,8892,6760,7164,5941,5168,8892
chr14:77425406-77426462	chr14	+	77425464	77426508	True	NM_194287,NM_024496	chr14,chr14	+,-	C14orf166B,IRF2BPL	-132790,68576
chr7:24785636-24785965	chr7	+	24785677	24786013	True	NM_016447,NM_001127453	chr7,chr7	+,-	MPP6,DFNA5	-172644,11122
chr3:128882007-128882246	chr3	+	128882048	128882288	True	NM_001199469,NM_001204890,NM_016128,NM_020701	chr3,chr3,chr3,chr3	-,-,+,-	ISY1,ISY1-RAB43,COPG,ISY1	-1975,-1975,86164,-1975
chr19:495353-495777	chr19	+	495408	495560	True	NM_130762,NM_182577,NM_130760	chr19,chr19,chr19	+,-,+	MADCAM1,ODF3L2,MADCAM1	929,-20425,929
chr9:39886558-39887018	chr9	+	39886983	39887065	True	NR_003528,NM_001040065,NM_001085452	chr9,chr9,chr9	-,+,+	LOC653501,FAM75A2,FAM75A1	-422457,-2059,-2059
chr7:77324204-77324678	chr7	+	77324250	77324418	True	NM_032936,NM_198467	chr7,chr7	-,+	TMEM60,RSBN1L	103385,1324
chr17:46895944-46896793	chr17	+	46895999	46896645	True	NM_005831,NM_001130918	chr17,chr17	+,-	CALCOCO2,TTLL6	11726,-1530
chr3:161009367-161010268	chr3	+	161009408	161009968	True	NM_015938,NM_001040100	chr3,chr3	+,-	NMD3,C3orf57	-70360,79961
chr2:114036211-114036411	chr2	+	114036216	114036332	True	NR_015377,NM_003466,NM_013952,NM_013953,NM_013992	chr2,chr2,chr2,chr2,chr2	+,-,-,-,-	LOC654433,PAX8,PAX8,PAX8,PAX8	-42421,216,216,216,216
chr11:69490219-69490545	chr11	+	69490292	69490400	True	NM_053056,NM_153451	chr11,chr11	+,-	CCND1,ORAOV1	-34470,-127
chr13:42017224-42018567	chr13	+	42018266	42018347	True	NM_004294,NR_002163	chr13,chr13	-,+	MTRF1,OR7E37P	-180553,-1625
chr3:135978887-135980373	chr3	+	135979250	135980343	True	NM_001178014,NM_018133	chr3,chr3	+,-	PCCB,MSL2	-10134,-64562
chr21:45345073-45345317	chr21	+	45345100	45345316	True	NR_026961,NM_001037553	chr21,chr21	-,+	LOC284837,AGPAT3	-112652,-38
chr2:238396208-238396723	chr2	+	238396340	238396772	True	NM_001042467,NM_024101,NM_057165	chr2,chr2,chr2	+,+,-	MLPH,MLPH,COL6A3	-513,-513,-73490
chrX:37645120-37646796	chrX	+	37645225	37646813	True	NM_000397,NM_006520	chrX,chrX	+,-	CYBB,DYNLT3	-6021,60127
chr1:22264395-22264696	chr1	+	22264401	22264601	True	NM_005529,NM_007352	chr1,chr1	-,+	HSPG2,CELA3B	-651,38816
chr17:38008988-38010346	chr17	+	38009255	38009780	True	NM_012481,NM_198844	chr17,chr17	-,+	IKZF3,ZPBP2	10726,14674
chr10:65213776-65214148	chr10	+	65213857	65214013	True	NR_027182,NM_032776	chr10,chr10	+,-	LOC84989,JMJD1C	10975,11767
chr15:64114639-64116587	chr15	+	64114941	64116334	True	NM_003922,NM_203373	chr15,chr15	-,+	HERC1,FBXL22	9864,-225449
chr17:65714323-65715234	chr17	+	65714473	65715089	True	NM_015462,NM_181655	chr17,chr17	+,-	NOL11,C17orf58	-463,274726
chr11:22292760-22293844	chr11	+	22292908	22293747	True	NM_020346,NM_022725	chr11,chr11	+,-	SLC17A6,FANCF	65919,353690
chr19:4909146-4909451	chr19	+	4909295	4909449	True	NM_001080523,NM_001048201,NM_013282	chr19,chr19,chr19	-,+,+	ARRDC5,UHRF1,UHRF1	-6416,60,1116
chr14:21980072-21980995	chr14	+	21980118	21980426	True	NM_014828,NM_019852	chr14,chr14	+,-	TOX4,METTL3	-34838,-661
chr20:57876107-57876811	chr20	+	57876188	57876802	True	NR_037930,NM_207033,NM_207032,NM_000114,NM_207034	chr20,chr20,chr20,chr20,chr20	-,+,+,+,+	SLMO2-ATP5E,EDN3,EDN3,EDN3,EDN3	-258287,-740,-740,-740,-740
chr1:44820876-44821103	chr1	+	44820896	44821152	True	NM_018150,NM_024066	chr1,chr1	+,-	RNF220,ERI3	49807,43
chr3:187084421-187084696	chr3	+	187084477	187084698	True	NM_022147,NM_001031849	chr3,chr3	+,-	RTP4,MASP1	1469,-74667
chrX:44734659-44735880	chrX	+	44734748	44735811	True	NM_176819,NM_021140	chrX,chrX	-,+	CXorf36,KDM6A	324385,-2378
chr2:69984493-69984810	chr2	+	69984724	69984812	True	NM_001153,NM_014911	chr2,chr2	+,-	ANXA4,AAK1	-15657,-113747
chr20:13976216-13976459	chr20	+	13976250	13976474	True	NM_080676,NM_025229	chr20,chr20	+,-	MACROD2,SEL1L2	-155,-4988
chr17:64186281-64187226	chr17	+	64186571	64187263	True	NM_145036,NM_002737,NM_001199165	chr17,chr17,chr17	-,+,-	CCDC46,PRKCA,CCDC46	774,111662,999
chr17:41475656-41476425	chr17	+	41475777	41476467	True	NR_027412,NM_001661,NR_027413	chr17,chr17,chr17	-,+,-	LOC100130581,ARL4D,LOC100130581	-9511,9,-9511
chr1:168148807-168150167	chr1	+	168148825	168149796	True	NM_153832,NM_001031800,NM_152902	chr1,chr1,chr1	-,+,+	GPR161,TIPRL,TIPRL	-43201,-705,-705
chr17:45811476-45811733	chr17	+	45811494	45811670	True	NM_145798,NM_013351	chr17,chr17	-,+	OSBPL7,TBX21	87527,-935
chr11:86747021-86747598	chr11	+	86747033	86747475	True	NR_033149,NM_012193,NM_022918,NM_001168724	chr11,chr11,chr11,chr11	+,-,+,+	TMEM135,FZD4,TMEM135,TMEM135	1410,-80600,1410,1410
chr7:141425279-141427168	chr7	+	141425637	141427142	True	NM_003143,NR_015392	chr7,chr7	+,-	SSBP1,FLJ40852	11033,10938
chr11:118795672-118795977	chr11	+	118795869	118796023	True	NM_006760,NM_182557	chr11,chr11	+,-	UPK2,BCL9L	30984,-14256
chr20:44444638-44444905	chr20	+	44444692	44444922	True	NM_181803,NM_181802,NM_181801,NM_181800,NM_007019,NM_003279,NM_181799	chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,+,+,+,+,-,+	UBE2C,UBE2C,UBE2C,UBE2C,UBE2C,TNNC2,UBE2C	-3495,-3495,-3078,-3495,-3495,11081,-3495
chr17:16318113-16318943	chr17	+	16318126	16318903	True	NM_016113,NM_181716	chr17,chr17	+,-	TRPV2,CENPV	-48,-61314
chr1:19280460-19281749	chr1	+	19280702	19281773	True	NM_001136265,NM_016183	chr1,chr1	-,+	IFFO2,MRTO4	1103,296301
chr12:50789839-50790636	chr12	+	50789884	50790537	True	NR_033200,NM_052879,NM_001145475,NM_199190,NM_001170804,NM_001170803,NM_199188,NM_001170808	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,-,+,+,+,+,+	LARP4,LARP4,FAM186A,LARP4,LARP4,LARP4,LARP4,LARP4	4054,4054,12,4054,4054,4054,4054,4054
chr7:99747991-99748788	chr7	+	99748044	99748676	True	NM_018275,NM_001008395	chr7,chr7	-,+	C7orf43,C7orf59	7676,-1569
chr17:25319232-25319496	chr17	+	25319314	25319516	True	NM_015626,NM_000625	chr17,chr17	+,-	WSB1,NOS2	301589,808089
chr17:25319232-25319496	chr17	+	21337883	21337933	False	NM_001113434,NM_001194958	chr17,chr17	-,+	C17orf51,KCNJ18	117058,-29486
chr7:86313431-86314119	chr7	+	86313458	86313873	True	NM_152748,NM_000840	chr7,chr7	-,+	KIAA1324L,GRM3	281477,-40279
chr22:25437235-25438186	chr22	+	25437282	25438234	True	NM_001001663,NM_001145206	chr22,chr22	-,+	TMEM211,KIAA1671	-101968,-13392
chr5:33441347-33441746	chr5	+	33441485	33441785	True	NM_152295,NM_030955	chr5,chr5	+,-	TARS,ADAMTS12	-638,450389
chr12:24715414-24715629	chr12	+	24715493	24715607	True	NR_030625,NM_152989	chr12,chr12	+,-	MIR920,SOX5	-350189,-113
chr1:19537036-19537459	chr1	+	19537137	19537493	True	NM_020765,NM_016183	chr1,chr1	-,+	UBR4,MRTO4	-391,40581
chr11:114449424-114449841	chr11	+	114449439	114449575	True	NM_001077639,NM_182495	chr11,chr11	-,+	FAM55D,FAM55B	16963,99624
chr2:197460647-197462428	chr2	+	197460670	197462101	True	NM_020760,NM_001080539	chr2,chr2	-,+	HECW2,CCDC150	-3335,42254
chr13:20734664-20734887	chr13	+	20734697	20734831	True	NM_021954,NM_001190965	chr13,chr13	-,+	GJA3,ZMYM2	406,-201774
chr5:55527072-55527459	chr5	+	55527074	55527486	True	NM_024669,NM_139017	chr5,chr5	-,+	ANKRD55,IL31RA	1750,-379791
chr10:72360301-72360524	chr10	+	72360313	72360573	True	NM_001083116,NM_080722,NM_005041	chr10,chr10,chr10	-,+,-	PRF1,ADAMTS14,PRF1	2008,71985,2008
chr11:129766152-129766555	chr11	+	129766207	129766366	True	NM_138788,NM_001143835,NM_006165	chr11,chr11,chr11	+,-,-	TMEM45B,NFRKB,NFRKB	-80517,-717,-3303
chr2:174831881-174833105	chr2	+	174831886	174832947	True	NM_003111,NM_001145250,NM_001017371,NM_001172712	chr2,chr2,chr2,chr2	-,+,-,-	SP3,SP9,SP3,SP3	-1456,366873,-2939,-1456
chr13:25253205-25254136	chr13	+	25253269	25254184	True	NM_001185085,NM_006437,NM_001676	chr13,chr13,chr13	+,-,+	ATP12A,PARP4,ATP12A	364,-166321,364
chr7:42951897-42952332	chr7	+	42951926	42952360	True	NM_024054,NM_001099858,NM_031903	chr7,chr7,chr7	-,-,+	C7orf25,C7orf25,MRPL32	-237,-237,19578
chr10:81702278-81704185	chr10	+	81702287	81703843	True	NR_002724,NM_003019	chr10,chr10	+,-	MBL1P,SFTPD	-22405,5068
chr10:101293419-101294316	chr10	+	101293616	101294312	True	NM_031212,NM_145285	chr10,chr10	-,+	SLC25A28,NKX2-3	85959,-977
chr11:33280113-33280552	chr11	+	33280272	33280600	True	NM_001033506,NM_001048200,NM_005734	chr11,chr11,chr11	-,+,+	CSTF3,HIPK3,HIPK3	-97235,-1155,-1155
chr17:7344270-7345220	chr17	+	7344561	7345209	True	NM_152766,NM_000747,NM_178518,NM_004112	chr17,chr17,chr17,chr17	-,+,+,+	C17orf61,CHRNB1,TMEM102,FGF11	-37111,3196,-5851,-1924
chr9:19202606-19202938	chr9	+	19202606	19202672	True	NR_038064,NM_017925	chr9,chr9	-,+	PLIN2,DENND4C	-75002,88076
chr1:85557518-85558746	chr1	+	85557581	85558716	True	NM_145172,NM_018298	chr1,chr1	+,-	WDR63,MCOLN3	-29639,-43412
chr6:160552801-160553016	chr6	+	160552818	160552980	True	NM_003058,NM_153187	chr6,chr6	-,+	SLC22A2,SLC22A1	127035,-10006
chr11:65191458-65191700	chr11	+	65191515	65191667	True	NR_028272,NM_182556	chr11,chr11	+,-	NEAT1,SLC25A45	-1297,-41373
chrX:99899383-99901373	chrX	+	99899385	99901411	True	NM_003270,NM_014467	chrX,chrX	-,+	TSPAN6,SRPX2	-7591,-273
chr1:40135893-40137150	chr1	+	40136001	40136823	True	NM_203456,NM_032526	chr1,chr1	+,-	PPIE,NT5C1A	67693,937
chr14:53171876-53172606	chr14	+	53171999	53172382	True	NM_002806,NM_014584	chr14,chr14	+,-	PSMC6,ERO1L	1513,-9580
chr2:176961789-176962103	chr2	+	176961845	176962057	True	NM_001080458,NM_000523,NM_021193	chr2,chr2,chr2	-,+,+	EVX2,HOXD13,HOXD12	-13155,-4364,2472
chr9:35861183-35861737	chr9	+	35861207	35861731	True	NM_001004487,NR_024006	chr9,chr9	-,+	OR13J1,LOC92973	8717,-987
chr14:94857191-94857640	chr14	+	94857194	94857642	True	NM_001127704,NM_001127705,NM_001127706,NM_001127707,NM_001127700,NM_001127701,NM_001127702,NM_001127703,NM_006215,NM_001002236,NM_001002235,NM_000295	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	-,-,-,-,-,-,-,-,+,-,-,-	SERPINA1,SERPINA1,SERPINA1,SERPINA1,SERPINA1,SERPINA1,SERPINA1,SERPINA1,SERPINA4,SERPINA1,SERPINA1,SERPINA1	-165,-165,-165,-165,-165,-165,-165,-165,170140,-165,-165,-2041
chr19:49221803-49222079	chr19	+	49221807	49222085	True	NM_001130915,NM_001097638,NM_182574	chr19,chr19,chr19	-,+,-	MAMSTR,FUT2,MAMSTR	941,-22630,-1593
chr19:40327583-40328325	chr19	+	40327637	40328281	True	NM_006484,NM_004714,NM_001143832,NM_006483,NM_001436	chr19,chr19,chr19,chr19,chr19	-,-,+,-,-	DYRK1B,DYRK1B,LEUTX,DYRK1B,FBL	-2796,-2796,-60454,-2796,8823
chr15:79382596-79382822	chr15	+	79382679	79382781	True	NM_001145648,NR_029705,NM_002891	chr15,chr15,chr15	-,+,-	RASGRF1,MIR184,RASGRF1	484,119348,484
chr11:2922967-2923172	chr11	+	2922999	2923091	True	NM_183233,NM_007105,NM_002555	chr11,chr11,chr11	+,-,+	SLC22A18,SLC22A18AS,SLC22A18	-2099,2134,420
chr11:131167993-131168700	chr11	+	131168026	131168726	True	NM_001048209,NM_014758	chr11,chr11	+,-	NTM,SNX19	71644,-381644
chr7:48047714-48049432	chr7	+	48048134	48049266	True	NM_001030019,NM_001100159	chr7,chr7	-,+	SUN3,C7orf57	19500,25850
chr1:28503600-28504930	chr1	+	28503646	28504759	True	NM_016311,NM_001164723,NM_000952	chr1,chr1,chr1	+,-,-	ATPIF1,PTAFR,PTAFR	57842,-462,-191
chrX:70988877-70989174	chrX	+	70988893	70989217	True	NR_001568,NM_001145140,NM_001145139	chrX,chrX,chrX	-,+,+	BCYRN1,CXorf49,CXorf49B	-39931,-5804,-5804
chrX:70988877-70989174	chrX	-	70932057	70932381	False	NR_034005,NM_001145140,NM_001145139	chrX,chrX,chrX	+,-,-	FLJ46446,CXorf49,CXorf49B	-15062,5804,5804
chr1:52517463-52518857	chr1	+	52517475	52518503	True	NM_015913,NM_001136497,NM_152265,NR_024350	chr1,chr1,chr1,chr1	-,+,+,+	TXNDC12,BTF3L4,BTF3L4,BTF3L4	2600,3353,3353,3353
chr4:2961787-2963262	chr4	+	2961984	2963248	True	NM_003703,NM_182982,NM_001004056,NM_001004057	chr4,chr4,chr4,chr4	-,+,+,+	NOP14,GRK4,GRK4,GRK4	1920,2094,2094,2094
chr8:103669799-103670045	chr8	+	103669916	103670093	True	NM_024410,NM_005655,NM_001032282	chr8,chr8,chr8	+,-,-	ODF1,KLF10,KLF10	-106119,-1933,-3748
chr16:29785706-29786561	chr16	+	29785705	29786293	True	NM_175900,NM_152338	chr16,chr16	-,+	C16orf54,ZG16	-28365,3267
chr14:105047243-105047611	chr14	+	105047242	105047636	True	NM_207379,NM_001008404	chr14,chr14	-,+	TMEM179,C14orf180	23511,-1237
chr8:74885819-74887240	chr8	+	74885948	74887295	True	NM_001204858,NM_001204859,NM_001204857,NM_017866,NM_001204861,NR_033334,NM_001204863,NM_001204862,NM_005648,NM_001204860,NM_001204864,NM_001040613	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,+,-,+,-,-,-,-,-,+	TCEB1,TCEB1,TCEB1,TMEM70,TCEB1,TMEM70,TCEB1,TCEB1,TCEB1,TCEB1,TCEB1,TMEM70	-1426,-1426,-1426,1081,-1805,1081,-1426,-1805,-1426,-1426,-1426,1081
chr7:63666185-63666594	chr7	+	63666367	63666605	True	NM_001159524,NM_178558	chr7,chr7	+,-	ZNF735,ZNF680	975,356950
chr7:63666185-63666594	chr7	+	63708301	63708351	False	NM_178558,NM_153363	chr7,chr7	-,+	ZNF680,ZNF679	315204,-19500
chr1:31885617-31885848	chr1	+	31885664	31885880	True	NM_001199039,NM_001199038,NM_018565,NM_001199037,NM_178865,NM_004102	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-	SERINC2,SERINC2,SERINC2,SERINC2,SERINC2,FABP3	779,-3303,779,-2694,82,-39741
chr10:114710040-114710806	chr10	+	114710060	114710714	True	NM_030756,NM_001146283,NM_001198531,NM_001198530,NM_001146284,NM_001146285,NM_001146286,NM_001198526,NM_001198527,NM_001198525,NM_022494,NM_001198528,NM_001198529,NM_001146274	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,+,+,+,+,+,-,+,+,+	TCF7L2,TCF7L2,TCF7L2,TCF7L2,TCF7L2,TCF7L2,TCF7L2,TCF7L2,TCF7L2,TCF7L2,ZDHHC6,TCF7L2,TCF7L2,TCF7L2	-102,-102,-102,-102,-102,-102,-102,-102,-102,-102,-503388,-102,-102,-102
chrX:151875813-151876886	chrX	+	151875812	151876917	True	NM_001129826,NM_005361,NM_175742,NM_005363,NM_001129828,NM_175743,NM_153488,NM_175868,NM_004909,NM_001080848	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,-,+,+,+,-,-	CSAG3,MAGEA2,MAGEA2,MAGEA6,CSAG3,MAGEA2,MAGEA2B,MAGEA6,CSAG2,CSAG2	803,6201,6201,-8618,880,6201,8466,-8618,880,880
chrX:151875813-151876886	chrX	+	151895466	151895523	False	NM_001166387,NM_001166386,NM_001102576,NM_005367,NM_153478	chrX,chrX,chrX,chrX,chrX	-,-,+,-,+	MAGEA12,MAGEA12,CSAG1,MAGEA12,CSAG1	7718,7635,7704,7718,7704
chrX:151875813-151876886	chrX	-	151928563	151929668	False	NM_001129826,NM_005361,NM_175742,NM_005362,NM_001129828,NM_175743,NM_153488,NM_004909,NM_001080848	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,-,-,-,+,-,-,+,+	CSAG3,MAGEA2,MAGEA2,MAGEA3,CSAG3,MAGEA2,MAGEA2B,CSAG2,CSAG2	-803,-6199,-6199,8622,-880,-6199,-8464,-880,-880
chrX:18707177-18707523	chrX	+	18707188	18707355	True	NM_000330,NM_152224,NM_152226,NM_006240	chrX,chrX,chrX,chrX	-,+,+,+	RS1,PPEF1,PPEF1,PPEF1	-16965,1689,1689,1689
chr16:1350282-1350787	chr16	+	1350572	1350670	True	NM_194261,NM_194260,NM_001001410,NM_003345,NM_194259	chr16,chr16,chr16,chr16,chr16	+,+,-,+,+	UBE2I,UBE2I,C16orf42,UBE2I,UBE2I	8509,8690,51253,8967,8967
chr19:17667440-17668200	chr19	+	17667768	17668070	True	NM_138454,NM_024656	chr19,chr19	-,+	NXNL1,GLT25D1	-96043,-1308
chr14:57276369-57277170	chr14	+	57276442	57277074	True	NM_021728,NM_172337,NR_029385	chr14,chr14,chr14	-,-,+	OTX2,OTX2,OTX2OS1	161,-4097,2826
chr22:40300314-40301220	chr22	+	40300468	40301242	True	NM_004810,NM_152512	chr22,chr22	+,-	GRAP2,ENTHD1	-3441,-10674
chr7:131359035-131359487	chr7	+	131359098	131359456	True	NM_005397,NM_013255	chr7,chr7	-,+	PODXL,MKLN1	-117722,-346554
chr9:86974820-86975980	chr9	+	86974997	86975987	True	NM_022127,NM_001018064	chr9,chr9	-,+	SLC28A3,NTRK2	7476,307478
chr9:140010678-140011384	chr9	+	140010744	140011432	True	NM_013379,NM_000832	chr9,chr9	-,+	DPP7,GRIN1	-1549,22176
chr14:105445179-105445944	chr14	+	105445268	105445954	True	NM_174891,NM_138420	chr14,chr14	+,-	C14orf79,AHNAK2	6661,-574
chr3:148858375-148859164	chr3	+	148858400	148859205	True	NM_032383,NM_139048	chr3,chr3	+,-	HPS3,HLTF	-11093,-54059
chr1:173804561-173805399	chr1	+	173804647	173804777	True	NM_033319,NM_018122	chr1,chr1	-,+	CENPL,DARS2	-10870,-10903
chr2:208996485-208998331	chr2	+	208996712	208998187	True	NM_020989,NM_006891,NM_001178000	chr2,chr2,chr2	-,-,+	CRYGC,CRYGD,PIKFYVE	-2158,-7399,132803
chr5:139493854-139494153	chr5	+	139493955	139494125	True	NM_005859,NM_013983	chr5,chr5	+,-	PURA,NRG2	-298,-71071
chr19:45007534-45008145	chr19	+	45007825	45008159	True	NM_001205280,NM_013256	chr19,chr19	+,-	LOC147710,ZNF180	108780,-3251
chr17:56298110-56298695	chr17	+	56298126	56298369	True	NM_001165927,NM_017777,NM_001160102	chr17,chr17,chr17	-,-,+	MKS1,MKS1,LPO	-1160,-1460,17417
chr6:87796719-87797507	chr6	+	87797024	87797310	True	NM_000735,NM_015021	chr6,chr6	-,+	CGA,ZNF292	7564,67958
chr2:102088857-102089817	chr2	+	102088856	102089853	True	NM_017546,NM_001145664	chr2,chr2	+,-	C2orf29,RFX8	-219562,1362
chr4:110622412-110623075	chr4	+	110622525	110623124	True	NM_018983,NM_001226,NM_032992	chr4,chr4,chr4	+,-,-	GAR1,CASP6,CASP6	113541,1555,1555
chr20:26085544-26086920	chr17	-	21542231	21542281	True	NM_001113434,NM_001194958	chr17,chr17	-,+	C17orf51,KCNJ18	-87290,-233834
chr2:27293915-27294181	chr2	+	27293919	27294159	True	NM_007046,NM_001134693	chr2,chr2	+,-	EMILIN1,OST4	7275,458
chr11:6503504-6505069	chr11	+	6503644	6505107	True	NM_012192,NM_006458,NM_033278,NM_012402	chr11,chr11,chr11,chr11	+,-,-,-	FXC1,TRIM3,TRIM3,ARFIP2	-1019,-8439,-8439,-1049
chr13:111368460-111368681	chr13	+	111368547	111368675	True	NM_198218,NM_198219,NM_005537,NM_024537,NM_198217	chr13,chr13,chr13,chr13,chr13	+,+,+,-,+	ING1,ING1,ING1,CARS2,ING1	-2988,-2973,-1239,-10067,-3515
chr1:65210978-65211376	chr1	+	65211005	65211355	True	NM_002227,NM_018211	chr1,chr1	-,+	JAK1,RAVER2	220882,-278
chr19:36508325-36508612	chr19	+	36508528	36508652	True	NM_198867,NM_032878,NM_001039876,NM_001042631	chr19,chr19,chr19,chr19	-,-,-,+	ALKBH6,ALKBH6,C19orf46,SDHAF1	-3387,-3387,-8856,-22489
chr10:119634070-119634396	chr10	+	119634072	119634283	True	NM_014904,NR_026941	chr10,chr10	-,+	RAB11FIP2,CASC2	171888,172048
chr12:9437249-9438362	chr12	+	9437354	9438147	True	NR_036263,NR_024374	chr12,chr12	-,+	MIR1244-3,LOC642846	-45207,-1153
chr12:9437249-9438362	chr12	-	9598922	9599715	False	NR_033399,NR_024374	chr12,chr12	-,+	DDX12,LOC642846	1104,-162727
chr12:9437249-9438362	chr12	+	31227978	31228577	False	NM_004399,NM_001135811,NM_030653,NM_152438	chr12,chr12,chr12,chr12	+,-,+,+	DDX11,FAM60A,DDX11,DDX11	-1250,250594,-1250,-1250
chr19:6484085-6484958	chr19	+	6484254	6484960	True	NM_174881,NM_024898	chr19,chr19	+,-	CRB3,DENND1C	-20045,-2456
chr1:153352343-153352770	chr1	+	153352353	153352651	True	NM_005621,NM_002965	chr1,chr1	-,+	S100A12,S100A9	-4278,-22074
chr19:53744935-53745343	chr19	+	53744947	53745143	True	NM_182609,NM_173856	chr19,chr19	-,+	ZNF677,VN1R2	13018,16401
chr17:38499274-38499510	chr17	+	38499290	38499470	True	NM_001024809,NM_152219	chr17,chr17	+,-	RARA,GJD3	-1071,21525
chr6:52104668-52104954	chr6	+	52104672	52104952	True	NM_052872,NM_002190	chr6,chr6	-,+	IL17F,IL17A	4396,-53551
chr2:207023287-207023737	chr2	+	207023305	207023687	True	NM_001959,NM_005006,NM_001037663,NM_021121,NR_002589,NR_002590,NM_001199984,NM_001199983,NM_001199982,NM_001199981	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,-,+,+,+,+,-,-,-,-	EEF1B2,NDUFS1,EEF1B2,EEF1B2,SNORD51,SNORA41,NDUFS1,NDUFS1,NDUFS1,NDUFS1	630,606,630,630,2917,3264,281,606,606,606
chr7:93550967-93551189	chr7	+	93551007	93551197	True	NM_004126,NM_006528	chr7,chr7	+,-	GNG11,TFPI2	-42,-30942
chr5:86179337-86180092	chr5	+	86179337	86180137	True	NR_036243,NR_037402	chr5,chr5	-,+	MIR4280,MIR3607	230685,-263077
chr16:31145322-31145799	chr16	+	31145379	31145739	True	NM_002773,NM_182958	chr16,chr16	-,+	PRSS8,MYST1	1462,-16445
chr1:145471423-145472077	chr1	+	145471529	145472115	True	NM_001039888,NM_032305,NM_153713	chr1,chr1,chr1	+,-,+	ANKRD34A,POLR3GL,LIX1L	-1072,-1142,4969
chr2:42797007-42798075	chr2	+	42797039	42797659	True	NM_172344,NM_020744	chr2,chr2	-,+	KCNG3,MTA3	-75802,-1426
chr11:73357382-73357668	chr11	+	73357387	73357535	True	NM_001130036,NM_001130034,NM_001130035,NM_001130033,NM_021200,NM_015159	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,-	PLEKHB1,PLEKHB1,PLEKHB1,PLEKHB1,PLEKHB1,FAM168A	2199,1058,1058,-215,-215,-48159
chr9:99840418-99840824	chr9	+	99840464	99840546	True	NR_002942,NM_001045477	chr9,chr9	-,+	LOC340508,FAM22G	3731,-149230
chr6:35310809-35311532	chr6	+	35310860	35311434	True	NM_001171819,NM_006238,NM_003214,NM_001171820,NM_001171818,NM_177435	chr6,chr6,chr6,chr6,chr6,chr6	+,+,-,+,+,+	PPARD,PPARD,TEAD3,PPARD,PPARD,PPARD	-576,-576,153477,-576,-576,-576
chr11:86341507-86342933	chr11	+	86341540	86342526	True	NM_001014811,NM_007173	chr11,chr11	-,+	ME3,PRSS23	40764,168964
chr13:51689600-51691022	chr13	+	51689642	51691064	True	NR_003923,NM_145019	chr13,chr13	-,+	GUCY1B2,FAM124A	-49349,105442
chr19:50270894-50272429	chr19	+	50270979	50272079	True	NM_021733,NM_130787,NM_014203	chr19,chr19,chr19	-,+,+	TSKS,AP2A1,AP2A1	-4464,-850,-850
chr4:1164600-1164853	chr4	+	1164634	1164824	True	NR_033339,NM_012445,NM_001128325	chr4,chr4,chr4	+,-,-	C4orf42,SPON2,SPON2	78403,1883,2225
chr7:139027367-139027723	chr7	+	139027571	139027761	True	NR_033999,NM_197964	chr7,chr7	-,+	LOC100129148,C7orf55	84561,-1732
chr19:55592934-55593226	chr19	+	55592936	55593198	True	NM_133180,NM_138412,NM_017729	chr19,chr19,chr19	+,-,+	EPS8L1,RDH13,EPS8L1	-5766,-12022,-1227
chr19:49656121-49656952	chr19	+	49656164	49656984	True	NM_001195227,NM_017636,NM_002152	chr19,chr19,chr19	+,+,-	TRPM4,TRPM4,HRC	4031,4031,1747
chr16:27077850-27078633	chr16	+	27077923	27078663	True	NM_145080,NM_001145545	chr16,chr16	-,+	NSMCE1,C16orf82	201500,-47
chr5:151305163-151306144	chr5	+	151305315	151306189	True	NM_198395,NM_000171,NM_001146040	chr5,chr5,chr5	+,-,-	G3BP1,GLRA1,GLRA1	-153890,-918,-918
chr1:100747554-100747900	chr1	+	100747558	100747910	True	NM_001918,NR_030279	chr1,chr1	-,+	DBT,MIR553	-32149,-820
chr3:36806129-36806619	chr3	+	36806169	36806663	True	NM_000249,NM_033403	chr3,chr3	+,-	MLH1,DCLK3	228177,-24817
chr2:131112545-131112832	chr2	+	131112762	131112880	True	NM_032357,NM_001142370,NM_014369	chr2,chr2,chr2	-,+,+	CCDC115,PTPN18,PTPN18	-12840,699,699
chr17:58679415-58679938	chr17	+	58679449	58679693	True	NM_003620,NM_006380	chr17,chr17	+,-	PPM1D,APPBP2	-1957,-75869
chr15:32908407-32908913	chr15	+	32908433	32908957	True	NM_014783,NM_199357,NR_036650	chr15,chr15,chr15	+,+,-	ARHGAP11A,ARHGAP11A,LOC100288615	-793,-793,-82491
chr15:32908407-32908913	chr15	+	30919082	30919569	False	NM_148911,NM_001039841	chr15,chr15	-,+	CHRFAM7A,ARHGAP11B	-233218,-254
chr1:232644760-232645623	chr1	+	232644862	232645556	True	NM_020808,NM_019090	chr1,chr1	-,+	SIPA1L2,KIAA1383	5737,295081
chr7:44530032-44530265	chr7	+	44530041	44530151	True	NM_015332,NM_001003941	chr7,chr7	-,+	NUDCD3,OGDH	284,115969
chr3:44038291-44039453	chr3	+	44038446	44039391	True	NM_001204834,NR_029700	chr3,chr3	-,+	ANO10,MIR138-1	-374886,116312
chrX:47857977-47858499	chrX	+	47858273	47858435	True	NM_001007088,NM_205856,NM_006962,NM_001178099,NM_001079900	chrX,chrX,chrX,chrX,chrX	-,+,-,-,+	ZNF182,SPACA5,ZNF182,ZNF182,SPACA5B	5006,5298,5006,5023,8734
chr1:155038367-155039364	chr1	+	155038658	155039352	True	NM_182689,NM_144622,NM_182690,NM_005227	chr1,chr1,chr1,chr1	+,-,+,+	EFNA4,DCST2,EFNA4,EFNA4	-2497,-32401,-2497,-2497
chr12:69202660-69204332	chr12	+	69202687	69204208	True	NM_001005502,NM_002392	chr12,chr12	-,+	CPM,MDM2	122828,-768
chr9:106899400-106900774	chr9	+	106899441	106900822	True	NM_001001919,NM_001042550	chr9,chr9	-,+	OR13C4,SMC2	388727,-42661
chr6:34208666-34208894	chr6	+	34208680	34208842	True	NM_001008704,NM_002131,NM_145899,NM_178508,NM_001008703,NM_145902,NM_145903,NM_145901,NM_145905	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,+,+,-,-,+,+,+,+	C6orf1,HMGA1,HMGA1,C6orf1,C6orf1,HMGA1,HMGA1,HMGA1,HMGA1	8112,-4154,-4154,8112,8112,-4081,-4154,-4081,-2163
chr12:71833068-71833327	chr12	+	71833074	71833286	True	NM_003667,NM_144982	chr12,chr12	+,-	LGR5,ZFC3H1	526,224513
chr5:102433745-102434456	chr5	+	102433954	102434502	True	NM_015216,NM_017676	chr5,chr5	+,-	PPIP5K2,GIN1	30754,21393
chr20:19866741-19867382	chr20	+	19866753	19867413	True	NM_016652,NM_018993	chr20,chr20	-,+	CRNKL1,RIN2	169327,2796
chr2:220434670-220434926	chr2	+	220434673	220434783	True	NM_001173431,NM_015311,NM_002191,NM_001173408	chr2,chr2,chr2,chr2	-,-,+,-	OBSL1,OBSL1,INHA,OBSL1	1535,1535,2170,1535
chr17:73268388-73268843	chr17	+	73268451	73268821	True	NR_036520,NM_020679	chr17,chr17	+,-	LOC100287042,MIF4GD	-1122,-1148
chr2:230787035-230787244	chr2	+	230787043	230787275	True	NM_174899,NM_004238	chr2,chr2	+,-	FBXO36,TRIP12	-37,-388
chr17:80007474-80007674	chr17	+	80007532	80007710	True	NM_004127,NM_002917,NM_212492	chr17,chr17,chr17	+,-,+	GPS1,RFNG,GPS1	2052,1990,2052
chr4:128983468-128984302	chr4	+	128983494	128984265	True	NM_032239,NM_018078,NM_178043,NM_152778	chr4,chr4,chr4,chr4	+,+,+,-	LARP1B,LARP1B,LARP1B,MFSD8	-1044,-1044,-1044,-96355
chr19:16188194-16189335	chr19	+	16188387	16189373	True	NM_003290,NM_054113	chr19,chr19	+,-	TPM4,CIB3	-1303,94963
chr13:76360814-76361531	chr13	+	76360872	76361556	True	NM_203497,NM_015842	chr13,chr13	-,+	COMMD6,LMO7	-248881,-26140
chr3:112741935-112743235	chr3	+	112742269	112743130	True	NM_015412,NR_027794,NR_027796,NM_138485	chr3,chr3,chr3,chr3	-,-,-,+	C3orf17,C3orf17,C3orf17,GTPBP8	-3714,-3714,-3714,-32529
chr19:34976960-34978165	chr19	+	34977021	34977780	True	NR_027620,NM_001080436	chr19,chr19	-,+	LOC643719,WTIP	90866,-4192
chr20:35726049-35727011	chr20	+	35726356	35726746	True	NM_002895,NM_183404,NM_001135771	chr20,chr20,chr20	-,-,+	RBL1,RBL1,RPN2	-1946,-1946,80709
chr19:11038788-11039010	chr19	+	11038791	11038853	True	NM_024029,NM_138358	chr19,chr19	-,+	YIPF2,C19orf52	554,570
chr19:40730384-40730669	chr19	+	40730386	40730658	True	NM_002446,NM_152479,NM_024877	chr19,chr19,chr19	+,-,-	MAP3K10,TTC9B,CNTD2	-32786,-6080,1989
chr4:155394975-155395794	chr4	+	155394976	155395794	True	NM_001142552,NM_001184741	chr4,chr4	-,+	DCHS2,FGB	17133,88337
chr10:115804750-115805087	chr10	+	115804831	115805011	True	NM_000684,NR_031747	chr10,chr10	+,-	ADRB1,MIR2110	-1076,128977
chr10:125809431-125809713	chr10	+	125809461	125809697	True	NM_015892,NM_001167880	chr10,chr10	-,+	CHST15,LHPP	42283,340643
chrX:106961982-106963333	chrX	+	106962063	106963283	True	NM_001015881,NM_002764,NM_004089	chrX,chrX,chrX	-,+,-	TSC22D3,PRPS1,TSC22D3	-2352,-90461,-1772
chr20:1098785-1099012	chr20	+	1098835	1098985	True	NM_018354,NM_006814,NM_178578	chr20,chr20,chr20	-,+,+	C20orf46,PSMF1,PSMF1	66190,254,-4987
chr18:23807545-23808649	chr18	+	23807545	23808449	True	NM_005640,NM_005637	chr18,chr18	+,-	TAF4B,SS18	-1192,-136934
chr20:61883949-61884674	chr20	+	61884081	61884587	True	NM_152864,NR_024389	chr20,chr20	-,+	NKAIN4,FLJ16779	1355,742
chr1:52094643-52095950	chr1	+	52094739	52095864	True	NR_036662,NM_001981	chr1,chr1	+,-	OSBPL9,EPS15	-12257,-109744
chr16:21533196-21533512	chr16	+	21533207	21533447	True	NM_001077180,NR_002594	chr16,chr16	+,-	METTL9,SLC7A5P2	77408,-1442
chr16:21533196-21533512	chr16	+	29626643	29626693	False	NR_002593,NM_001030288	chr16,chr16	-,+	SLC7A5P1,SPN	-1605,47606
chr1:150207761-150207962	chr1	+	150207806	150207936	True	NM_012113,NM_001136478,NM_001136479,NM_030920	chr1,chr1,chr1,chr1	+,-,-,-	CA14,ANP32E,ANP32E,ANP32E	22281,619,-780,619
chr8:8088477-8089098	chr8	+	8088476	8088898	True	NR_024361,NR_031689,NR_024363,NR_024362	chr8,chr8,chr8,chr8	+,-,+,+	FLJ10661,MIR548I3,FLJ10661,FLJ10661	-2435,-141865,-2435,-2435
chr1:22327857-22328175	chr1	+	22327872	22328196	True	NM_005529,NM_005747	chr1,chr1	-,+	HSPG2,CELA3A	-64122,-48
chr1:22327857-22328175	chr1	+	22303236	22303286	False	NM_005529,NM_007352	chr1,chr1	-,+	HSPG2,CELA3B	-39486,131
chr22:38093496-38093926	chr22	+	38093572	38093933	True	NM_006498,NM_001039141	chr22,chr22	-,+	LGALS2,TRIOBP	-117548,-628
chr12:106752429-106753200	chr12	+	106752464	106753099	True	NM_018082,NM_001160708,NM_006825	chr12,chr12,chr12	+,+,-	POLR3B,POLR3B,CKAP4	-1079,-655,-110751
chr16:82075319-82077009	chr16	+	82075391	82076806	True	NM_145168,NM_002153	chr16,chr16	-,+	SDR42E1,HSD17B2	-30298,-6584
chr16:4852151-4852355	chr16	+	4852196	4852310	True	NM_024589,NR_029455	chr16,chr16	-,+	ROGDI,LOC440335	414,-6868
chr18:3360881-3361341	chr18	+	3361045	3361159	True	NM_019856,NM_174886	chr18,chr18	-,+	MYOM1,TGIF1	-140939,50912
chr13:42534037-42534585	chr13	+	42534089	42534554	True	NM_015058,NM_001204504,NM_001009814	chr13,chr13,chr13	-,+,-	KIAA0564,DGKH,KIAA0564	718,79617,718
chr4:220866-221541	chr4	+	221034	221561	True	NM_001137608,NR_027481	chr4,chr4	-,+	ZNF732,ZNF876P	68442,-14712
chr22:43583045-43583430	chr22	+	43583060	43583120	True	NM_015140,NM_007311	chr22,chr22	-,+	TTLL12,TSPO	67,-35576
chr20:2518403-2518961	chr20	+	2518446	2518866	True	NM_024325,NM_080751	chr20,chr20	-,+	ZNF343,TMC2	-28668,-1244
chr18:59163585-59163886	chr18	+	59163611	59163885	True	NM_031891,NM_173557	chr18,chr18	+,-	CDH20,RNF152	-5887,396469
chr6:5275034-5277020	chr6	+	5275531	5277031	True	NM_006567,NM_001164840	chr6,chr6	+,-	FARS2,LYRM4	-14001,-14359
chr6:34431380-34432286	chr6	+	34431386	34432268	True	NM_001204091,NM_020804	chr6,chr6	-,+	RPS10,PACSIN1	-37484,1584
chr17:75082396-75082684	chr17	+	75082400	75082602	True	NM_001204408,NR_036200,NM_001204410,NR_027058,NR_003013	chr17,chr17,chr17,chr17,chr17	+,-,+,+,+	SEC14L1,MIR4316,SEC14L1,C17orf86,SCARNA16	2122,310584,2632,2122,2786
chr3:197355224-197356007	chr3	+	197355345	197356039	True	NR_003266,NM_001011537	chr3,chr3	-,+	LOC220729,FYTTD1	-593,120384
chr3:197355224-197356007	chr3	+	195718057	195718456	False	NR_034088,NR_003264	chr3,chr3	+,-	LOC401109,SDHAP1	151050,-907
chr3:197355224-197356007	chr3	-	195383647	195384181	False	NM_001647,NR_003265	chr3,chr3	-,+	APOD,SDHAP2	-72571,728
chr9:74521445-74522586	chr9	+	74521811	74522371	True	NM_001025780,NM_182505,NM_016014	chr9,chr9,chr9	-,+,-	FAM108B1,C9orf85,FAM108B1	3827,4051,3827
chr1:153915507-153916724	chr1	+	153915618	153916407	True	NM_130898,NM_014856	chr1,chr1	+,-	CREB3L4,DENND4B	23989,2804
chr2:219695096-219696430	chr2	+	219695133	219696357	True	NM_017431,NM_006522	chr2,chr2	-,+	PRKAG3,WNT6	212,28188
chr11:62035638-62035998	chr11	+	62035637	62035713	True	NM_002411,NM_206998	chr11,chr11	+,-	SCGB2A2,SCGB1D4	1916,30873
chr13:21142950-21143481	chr13	+	21143145	21143389	True	NM_175605,NM_006531,NM_015974	chr13,chr13,chr13	+,+,-	IFT88,IFT88,CRYL1	-1991,-1991,-43133
chr14:95617204-95618360	chr14	+	95617532	95618239	True	NR_015415,NM_177438,NM_030621	chr14,chr14,chr14	+,-,-	FLJ45244,DICER1,DICER1	5785,5578,-9477
chr1:16679223-16679467	chr1	+	16679222	16679494	True	NM_018994,NM_001114600	chr1,chr1	-,+	FBXO42,C1orf144	-274,14088
chr19:41083671-41084247	chr19	+	41083890	41084294	True	NM_000713,NM_138392,NM_004756	chr19,chr19,chr19	-,+,-	BLVRB,SHKBP1,NUMBL	-112165,-1191,112312
chr1:151372998-151373827	chr1	+	151373027	151373823	True	NM_003944,NM_002796	chr1,chr1	-,+	SELENBP1,PSMB4	-27863,-1037
chr17:40192480-40192742	chr17	+	40192532	40192770	True	NM_017595,NR_029431	chr17,chr17	+,-	NKIRAS2,DNAJC7	-20496,-22817
chr6:139137991-139139177	chr6	+	139138002	139139214	True	NM_001195037,NM_001128617	chr6,chr6	+,-	ECT2L,REPS1	-20818,170234
chr11:35080866-35081753	chr11	+	35080891	35081499	True	NM_015957,NM_001202557	chr11,chr11	-,+	APIP,CD44	-142952,78917
chrX:99904238-99904907	chrX	+	99904279	99904957	True	NM_003270,NM_014467	chrX,chrX	-,+	TSPAN6,SRPX2	-12485,-5167
chr4:111546240-111547676	chr4	+	111546450	111547634	True	NM_001977,NM_000325	chr4,chr4	+,-	ENPEP,PITX2	-149272,-2196
chr17:76921866-76922333	chr17	+	76921950	76922292	True	NM_003255,NM_030968	chr17,chr17	-,+	TIMP2,C1QTNF1	-478,97958
chr15:71407693-71407964	chr15	+	71407767	71407851	True	NM_024817,NM_001102658	chr15,chr15	+,-	THSD4,CT62	25936,38
chr15:65668962-65669220	chr15	+	65669059	65669249	True	NM_004884,NM_016395	chr15,chr15	-,+	IGDCC3,PTPLAD1	1179,153577
chr17:76839947-76840150	chr17	+	76840130	76840197	True	NM_030968,NM_025090	chr17,chr17	+,-	C1QTNF1,USP36	180053,-3161
chr11:64612049-64612252	chr11	+	64612052	64612286	True	NM_017525,NM_006244	chr11,chr11	-,+	CDC42BPG,PPP2R5B	-11,79856
chr1:177164063-177164883	chr1	+	177164112	177164922	True	NM_207108,NM_021165	chr1,chr1	-,+	ASTN1,FAM5B	-30088,-23530
chr4:72993373-72995052	chr4	+	72993417	72994813	True	NM_053036,NM_001204306	chr4,chr4	+,-	NPFFR2,GC	-88627,-322180
chr15:90196399-90196939	chr15	+	90196411	90196715	True	NM_020212,NM_198525	chr15,chr15	+,-	WDR93,KIF7	37312,2017
chr15:90726230-90726742	chr15	+	90726528	90726702	True	NM_020210,NM_006384	chr15,chr15	+,-	SEMA4B,CIB1	1449,50635
chr6:90121277-90121491	chr6	+	90121364	90121426	True	NM_021244,NM_014942	chr6,chr6	-,+	RRAGD,ANKRD6	619,21470
chr6:126661354-126661737	chr6	+	126661473	126661763	True	NM_001139510,NM_001012507	chr6,chr6	-,+	ECHDC1,CENPW	1001839,-271
chr17:33444747-33445852	chr17	+	33444833	33445769	True	NM_002878,NR_037711,NR_037712,NR_037714,NM_133629,NM_017559,NM_001142571	chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,+,-	RAD51L3,RAD51L3,RAD51L3,RAD51L3-RFFL,RAD51L3,FNDC8,RAD51L3	1170,1170,1170,2823,1170,2861,1170
chr11:67276187-67276421	chr11	+	67276269	67276423	True	NM_003977,NM_005851,NM_004910,NM_001130848	chr11,chr11,chr11,chr11	+,-,-,-	AIP,CDK2AP2,PITPNM1,PITPNM1	-25815,-167,-3426,-3426
chr19:19649473-19649732	chr19	+	19649542	19649768	True	NM_032037,NM_153221,NM_001190328,NM_198537	chr19,chr19,chr19,chr19	-,+,+,+	TSSK6,CILP2,YJEFN3,YJEFN3	-23073,-519,-9923,-9923
chr1:161992332-161992691	chr1	+	161992332	161992732	True	NM_001164757,NM_015441	chr1,chr1	+,-	NOS1AP,OLFML2B	46848,963
chr14:37671246-37673078	chr14	+	37671384	37672782	True	NM_138731,NM_030631,NM_001195297,NM_001195296	chr14,chr14,chr14,chr14	+,-,+,+	MIPOL1,SLC25A21,MIPOL1,MIPOL1	-4330,-29519,-4330,-4330
chr1:202935564-202935936	chr1	+	202935605	202935971	True	NM_016243,NM_001127687,NM_015999,NM_138391	chr1,chr1,chr1,chr1	-,-,-,+	CYB5R1,ADIPOR1,ADIPOR1,TMEM183A	483,-7905,-8120,40562
chr11:64072167-64072369	chr11	+	64072221	64072417	True	NM_004451,NM_001039496,NM_016404	chr11,chr11,chr11	+,+,-	ESRRA,C11orf20,TRMT112	626,-4409,12666
chr6:90995458-90996514	chr6	+	90995552	90996428	True	NM_021813,NM_032602	chr6,chr6	-,+	BACH2,GJA10	10191,-391416
chr21:33754815-33755810	chr21	+	33754828	33755776	True	NR_002996,NM_014825,NR_026845	chr21,chr21,chr21	-,-,+	SNORA80,URB1,C21orf119	-5197,9586,9665
chrX:153521514-153521948	chrX	+	153521603	153521669	True	NM_001205201,NM_001145933,NM_012253,NM_001586	chrX,chrX,chrX,chrX	-,+,+,-	TEX28,TKTL1,TKTL1,TEX28	1951,2357,2357,1841
chrX:153521514-153521948	chrX	+	153446677	153446743	False	NM_001586,NM_000513,NM_001048181	chrX,chrX,chrX	-,+,+	TEX28,OPN1MW,OPN1MW2	76767,1341,1341
chrX:153521514-153521948	chrX	+	153483794	153483860	False	NM_001586,NM_000513,NM_001048181	chrX,chrX,chrX	-,+,+	TEX28,OPN1MW,OPN1MW2	39650,1342,1342
chr1:28000705-28001454	chr1	+	28000961	28001294	True	NM_022872,NM_002038,NM_022873,NM_001143912	chr1,chr1,chr1,chr1	-,-,-,+	IFI6,IFI6,IFI6,FAM76A	-2237,-2237,-2237,51195
chr19:1651369-1651660	chr19	+	1651569	1651635	True	NM_001136139,NM_003200,NM_001080488	chr19,chr19,chr19	-,-,+	TCF3,TCF3,ONECUT3	-1283,741,102026
chr6:41128804-41129341	chr6	+	41128822	41129226	True	NM_018965,NR_026938,NM_178174	chr6,chr6,chr6	-,+,-	TREM2,LOC221442,TREML1	1746,-60100,-6752
chr5:172074032-172074453	chr5	+	172074071	172074417	True	NM_001142651,NM_004417	chr5,chr5	+,-	NEURL1B,DUSP1	-5846,123836
chr19:3048901-3049735	chr19	+	3049324	3049573	True	NM_001144761,NM_002067	chr19,chr19	-,+	TLE2,GNA11	-1691,44834
chr7:65667313-65667589	chr7	+	65667346	65667632	True	NR_026873,NM_003596	chr7,chr7	-,+	NCRNA00174,TPST1	197813,2626
chr17:42201333-42201629	chr17	+	42201338	42201678	True	NM_001015053,NM_001171251,NM_005474	chr17,chr17,chr17	-,+,-	HDAC5,C17orf53,HDAC5	-324,17595,-324
chr20:55102621-55102835	chr20	+	55102623	55102835	True	NM_001012971,NM_080615,NM_001013646	chr20,chr20,chr20	+,-,+	C20orf106,GCNT7,C20orf107	-2889,-1642,5466
chr17:8128998-8129680	chr17	+	8129046	8129704	True	NR_026951,NM_012393	chr17,chr17	-,+	C17orf44,PFAS	-1685,22891
chr6:84138836-84140477	chr6	+	84139112	84140371	True	NM_002395,NM_001170423	chr6,chr6	-,+	ME1,PRSS35	617,81822
chr15:89765128-89765456	chr15	+	89765167	89765497	True	NM_001113378,NM_000326	chr15,chr15	+,-	FANCI,RLBP1	21696,-245
chr11:64826776-64828641	chr11	+	64826836	64828319	True	NM_005468,NM_013299	chr11,chr11	-,+	NAALADL1,SAC3D1	-827,-18514
chr17:43209432-43209637	chr17	+	43209598	43209670	True	NM_024722,NM_133373,NM_001135707,NM_001135706,NM_001135705,NM_001135704	chr17,chr17,chr17,chr17,chr17,chr17	+,-,+,+,+,+	ACBD4,PLCD3,ACBD4,ACBD4,ACBD4,ACBD4	3343,271,3343,3343,3343,296
chr2:239833303-239834032	chr2	+	239833316	239834042	True	NR_034162,NM_057179	chr2,chr2	-,+	FLJ43879,TWIST2	13973,-76694
chr20:1449186-1450148	chr20	+	1449262	1449907	True	NM_182483,NM_016143,NM_014723,NM_018839	chr20,chr20,chr20,chr20	-,-,+,-	NSFL1C,NSFL1C,SNPH,NSFL1C	-845,-845,-202353,-845
chr3:48507111-48507383	chr3	+	48507171	48507419	True	NM_033629,NM_024661,NM_016381	chr3,chr3,chr3	+,-,+	TREX1,CCDC51,TREX1	7,-25642,7
chr7:38729359-38730083	chr7	+	38729369	38730049	True	NR_028347,NM_001166018	chr7,chr7	-,+	FAM183B,POU6F2	-2680,287559
chr19:18700536-18701554	chr19	+	18700701	18701537	True	NM_004750,NM_001100419,NM_001100418	chr19,chr19,chr19	-,+,+	CRLF1,C19orf60,C19orf60	16173,-1257,-1257
chr8:144621448-144622120	chr8	+	144621513	144622119	True	NM_001166237,NM_015117	chr8,chr8	+,-	GSDMD,ZC3H3	13437,1551
chr17:27369849-27370179	chr17	+	27369858	27370206	True	NM_016518,NM_004740	chr17,chr17	+,-	PIPOX,TIAF1	1,32471
chr19:10147501-10148440	chr19	+	10147546	10148486	True	NM_015719,NR_027300	chr19,chr19	-,+	COL5A3,C3P1	-26399,3545
chr11:133944522-133946140	chr11	+	133944551	133945948	True	NM_014987,NM_032801	chr11,chr11	-,+	IGSF9B,JAM3	-117671,-5790
chr4:154603526-154604768	chr4	+	154603856	154604730	True	NM_173662,NM_003264	chr4,chr4	-,+	RNF175,TLR2	76707,710
chr11:909187-909830	chr11	+	909211	909751	True	NM_012305,NM_001142675,NM_001142674,NM_001142677,NM_001142676,NM_023947	chr11,chr11,chr11,chr11,chr11,chr11	+,-,-,-,-,-	AP2A2,CHID1,CHID1,CHID1,CHID1,CHID1	16089,5357,1173,1173,1173,1173
chr17:7465272-7465504	chr17	+	7465423	7465485	True	NM_172087,NM_003808,NR_037926,NM_172088,NM_006942,NM_001198624,NM_015670,NM_001198623,NM_001198622	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,-,+,+,+,+	TNFSF13,TNFSF13,SENP3-EIF4A1,TNFSF13,SOX15,TNFSF13,SENP3,TNFSF13,TNFSF13	-3865,-3865,-165,-3865,28053,-3865,-165,-3865,-3865
chr5:52404909-52405359	chr5	+	52404990	52405306	True	NR_034107,NM_004531,NM_176806	chr5,chr5,chr5	+,-,-	LOC257396,MOCS2,MOCS2	380,69,342
chr19:13617547-13617936	chr19	+	13617546	13617949	True	NM_001127222,NM_001127221,NM_000068,NM_001174080,NM_023035,NM_030818	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,+	CACNA1A,CACNA1A,CACNA1A,CACNA1A,CACNA1A,CCDC130	-272,-272,-272,-272,-272,240803
chr2:32264010-32264410	chr2	+	32264033	32264403	True	NM_032574,NM_014946	chr2,chr2	-,+	DPY30,SPAST	491,24276
chr13:96297425-96298067	chr13	+	96297427	96297744	True	NM_006260,NM_198968,NM_014934	chr13,chr13,chr13	+,-,-	DNAJC3,DZIP1,DZIP1	31648,-470,-470
chr6:137156517-137157945	chr6	+	137156833	137157724	True	NM_000288,NM_005923	chr6,chr6	+,-	PEX7,MAP3K5	-13189,-43177
chr22:50763509-50763857	chr22	+	50763526	50763760	True	NM_001001794,NM_014678	chr22,chr22	-,+	FAM116B,PPP6R2	1781,17999
chr11:67218799-67219228	chr11	+	67218953	67219223	True	NM_020441,NM_145200,NM_206997,NM_001018070	chr11,chr11,chr11,chr11	-,+,-,-	CORO1B,CABP4,GPR152,CORO1B	-7970,3594,1027,-7690
chr21:44810283-44811580	chr21	+	44810363	44811577	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	58326,35475
chr11:64322440-64322667	chr11	+	64322588	64322664	True	NM_018484,NM_138734	chr11,chr11	+,-	SLC22A11,NRXN2	433,88173
chr6:152477088-152478423	chr6	+	152477095	152477919	True	NM_000125,NM_133650	chr6,chr6	+,-	ESR1,SYNE1	-348332,22732
chr7:135620952-135622735	chr7	+	135621364	135622760	True	NM_001130929,NM_001128619	chr7,chr7	+,-	PL-5283,LUZP6	-274194,39506
chr19:35982245-35982903	chr19	+	35982288	35982872	True	NM_001035516,NM_014364,NM_005306,NM_207392	chr19,chr19,chr19,chr19	-,+,+,-	DMKN,GAPDHS,FFAR2,KRTDAP	9991,41441,-41723,-932
chr1:16089241-16089846	chr1	+	16089240	16089564	True	NM_001024215,NM_001024216,NM_001089591,NM_017556	chr1,chr1,chr1,chr1	+,+,-,+	FBLIM1,FBLIM1,UQCRHL,FBLIM1	1429,1894,44680,-4036
chr6:26437463-26438944	chr6	+	26437627	26438686	True	NM_197974,NM_006994,NM_003543	chr6,chr6,chr6	+,+,-	BTN3A3,BTN3A3,HIST1H4H	2013,2013,-151900
chr14:93671933-93672646	chr14	+	93672126	93672689	True	NM_001100417,NM_175748,NM_032490	chr14,chr14,chr14	+,+,-	UBR7,UBR7,C14orf142	711,711,820
chrX:107078746-107079574	chrX	+	107078952	107079477	True	NM_052817,NM_198057,NM_012216	chrX,chrX,chrX	+,-,+	MID2,TSC22D3,MID2	-9932,-59935,-9932
chr4:75311134-75311541	chr4	+	75311288	75311582	True	NM_001657,NM_002089	chr4,chr4	+,-	AREG,CXCL2	-486,-346291
chr4:75311134-75311541	chr4	+	75481064	75481358	False	NM_001657,NM_001729	chr4,chr4	+,-	AREG,BTC	-486,238574
chr6:84141545-84141788	chr6	+	84141557	84141727	True	NM_002395,NM_001170423	chr6,chr6	-,+	ME1,PRSS35	-619,80466
chrX:15518344-15518942	chrX	+	15518397	15518913	True	NM_001721,NM_001018109,NM_003662,NR_037859,NM_203281	chrX,chrX,chrX,chrX,chrX	+,-,-,-,+	BMX,PIR,PIR,PIR-FIGF,BMX	6517,-6686,-6686,-8965,-14
chr7:35706806-35708332	chr7	+	35706806	35708233	True	NM_022373,NM_001011553	chr7,chr7	-,+	HERPUD2,SEPT7	26590,132393
chr20:34362286-34363598	chr20	+	34362319	34363234	True	NM_184234,NM_016436	chr20,chr20	-,+	RBM39,PHF20	-32126,-2457
chr11:64513154-64513553	chr11	+	64513160	64513574	True	NM_001098671,NM_001098670,NM_153378,NM_153819	chr11,chr11,chr11,chr11	-,-,+,-	RASGRP2,RASGRP2,SLC22A12,RASGRP2	-1530,-831,-154929,-232
chr21:44523378-44524901	chr21	+	44523622	44524753	True	NM_006758,NM_001025203,NM_001025204,NM_000394	chr21,chr21,chr21,chr21	-,-,-,+	U2AF1,U2AF1,U2AF1,CRYAA	2985,2985,2985,64387
chr2:206545430-206546632	chr2	+	206545709	206546619	True	NM_201266,NM_201267,NM_201264,NM_201279,NM_003872,NM_018534,NM_017759	chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,+,+,-	NRP2,NRP2,NRP2,NRP2,NRP2,NRP2,INO80D	604,604,604,604,604,604,404338
chr4:49323719-49325040	chr4	+	49324602	49325038	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-336388,-415787
chr3:119014119-119015645	chr3	+	119014219	119015497	True	NM_212543,NM_020754	chr3,chr3	-,+	B4GALT4,ARHGAP31	-54467,-1050
chr6:71139070-71139759	chr6	+	71139329	71139698	True	NM_001851,NM_001162529	chr6,chr6	-,+	COL9A1,FAM135A	-126543,-3244
chr16:79635500-79635771	chr16	+	79635598	79635789	True	NM_005360,NM_130897,NM_001031804	chr16,chr16,chr16	-,+,-	MAF,DYNLRB2,MAF	-976,939064,-976
chr5:140248562-140248879	chr5	+	140248562	140248696	True	NM_018903,NM_018902,NM_031861,NM_002109,NM_031864	chr5,chr5,chr5,chr5,chr5	+,+,+,-,+	PCDHA12,PCDHA11,PCDHA11,HARS,PCDHA12	6234,-785,-785,-177591,6234
chr1:150255150-150255501	chr1	+	150255214	150255432	True	NM_016022,NM_144697	chr1,chr1	-,+	APH1A,C1orf51	-13682,-36
chr17:28703754-28703980	chr17	+	28703754	28703992	True	NM_206832,NM_001199775,NM_001304	chr17,chr17,chr17	-,+,+	TMIGD1,CPD,CPD	-42689,3503,1949
chr7:105170812-105171136	chr7	+	105170912	105171184	True	NM_021930,NM_019042	chr7,chr7	+,-	RINT1,PUS7	1347,-8227
chr16:22832403-22832953	chr16	+	22832426	22832988	True	NR_037517,NM_006043	chr16,chr16	-,+	MIR548AA2,HS3ST2	-29063,-6624
chr16:75682868-75683161	chr16	+	75683051	75683173	True	NM_005548,NM_001130089,NM_018975	chr16,chr16,chr16	-,-,+	KARS,KARS,TERF2IP	-1466,-1466,-1472
chr12:121343397-121344172	chr12	+	121343571	121344133	True	NM_139015,NM_000545	chr12,chr12	-,+	SPPL3,HNF1A	-1420,72415
chr6:132133057-132134274	chr6	+	132133061	132134319	True	NM_006208,NM_001145659	chr6,chr6	+,-	ENPP1,CTAGE9	-3963,-100904
chr8:677747-677988	chr8	+	677770	677880	True	NM_207332,NM_183421	chr8,chr8	-,+	ERICH1,FBXO25	3396,-321013
chr19:55139503-55140447	chr19	+	55139786	55140430	True	NM_001081639,NM_001081638,NM_001081637,NM_145057	chr19,chr19,chr19,chr19	+,+,+,-	LILRB1,LILRB1,LILRB1,CDC42EP5	1477,1477,1537,-155364
chr6:134158871-134159135	chr6	+	134158875	134159163	True	NR_027030,NM_145176	chr6,chr6	+,-	MGC34034,SLC2A12	-16641,214676
chr22:39761230-39762370	chr22	+	39761380	39762355	True	NM_001033853,NM_145738	chr22,chr22	-,+	RPL3,SYNGR1	-45710,-1256
chr11:13485198-13485426	chr11	+	13485203	13485386	True	NM_001178,NM_032320	chr11,chr11	+,-	ARNTL,BTBD10	-185929,-365
chr2:1749392-1749727	chr2	+	1749395	1749743	True	NM_012293,NM_175722	chr2,chr2	-,+	PXDN,TPO	-1104,-331266
chr17:64307540-64308987	chr17	+	64307811	64308853	True	NM_002737,NM_000042	chr17,chr17	+,-	PRKCA,APOH	-8942,-82255
chr17:27572300-27572581	chr17	+	27572520	27572630	True	NM_005208,NM_020772	chr17,chr17	+,-	CRYBA1,NUFIP2	1244,48586
chr12:113495513-113495732	chr12	+	113495525	113495777	True	NM_004416,NM_001193521	chr12,chr12	+,-	DTX1,RASAL1	86,77832
chr18:48114960-48115888	chr18	+	48115253	48115628	True	NM_002747,NM_001127175	chr18,chr18	+,-	MAPK4,MRO	-28820,230863
chr3:155869976-155871554	chr3	+	155870524	155871578	True	NM_003471,NM_004733	chr3,chr3	+,-	KCNAB1,SLC33A1	-9831,-298276
chr10:13343605-13344234	chr10	+	13343895	13344143	True	NM_006214,NM_001037537,NM_182751	chr10,chr10,chr10	-,-,+	PHYH,PHYH,MCM10	-1765,-2149,-140399
chr9:88719701-88721291	chr9	+	88719826	88721308	True	NM_177937,NM_024635,NM_016548	chr9,chr9,chr9	-,+,-	GOLM1,NAA35,GOLM1	-4710,-163829,-5316
chr2:70526044-70526823	chr2	+	70526095	70526678	True	NM_032822,NM_003096,NM_016297	chr2,chr2,chr2	-,-,+	FAM136A,SNRPG,PCYOX1	2593,-5226,-40923
chr7:100132528-100132909	chr7	+	100132590	100132847	True	NM_006076,NM_001168682	chr7,chr7	+,-	AGFG2,SAP25	3986,38474
chr17:34843557-34845513	chr17	+	34844026	34845071	True	NM_004773,NM_001040282	chr17,chr17	+,-	ZNHIT3,TBC1D3G	-1615,-35923
chr2:108991772-108992001	chr2	+	108991772	108991833	True	NR_024439,NM_006588	chr2,chr2	-,+	LOC729121,SULT1C4	-549189,2587
chr22:42606941-42608176	chr22	+	42607132	42608204	True	NM_005650,NM_181492,NR_036498	chr22,chr22,chr22	-,-,+	TCF20,TCF20,LOC388906	3291,3291,57554
chr1:17907370-17908481	chr1	+	17907453	17908515	True	NM_018715,NM_001011722	chr1,chr1	-,+	RCC2,ARHGEF10L	-141233,-456
chr4:175873968-175874291	chr4	+	175874002	175874169	True	NM_014269,NM_006529	chr4,chr4	+,-	ADAM29,GLRA3	-34553,-123537
chr16:70151137-70152646	chr16	+	70151516	70152648	True	NM_017990,NR_003610	chr16,chr16	+,-	PDPR,PDXDC2P	-4038,-51665
chrX:118286503-118287658	chrX	+	118286502	118287360	True	NM_006667,NM_020721	chrX,chrX	+,-	PGRMC1,KIAA1210	82850,-1960
chr1:117754795-117756250	chr1	+	117754824	117756235	True	NM_024626,NR_030640	chr1,chr1	-,+	VTCN1,MIR942	-1275,-117610
chrX:147062914-147063196	chrX	+	147062964	147063188	True	NM_152578,NR_024503	chrX,chrX	+,-	FMR1NB,FMR1-AS1	-166,-59288
chr1:187129010-187130147	chr1	+	187129010	187130187	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-479451,-331032
chr12:56114179-56115027	chr12	+	56114251	56114882	True	NM_001780,NM_001144997,NR_037656,NR_037658,NM_001040034,NR_037655,NR_037657,NM_001487,NM_002905,NM_001199771	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,-,+,+,-,+,+,+,+,+	CD63,ITGA7,BLOC1S1,BLOC1S1-RDH5,CD63,BLOC1S1,BLOC1S1,BLOC1S1,RDH5,RDH5	8079,-8162,-4226,-4484,8079,-4484,-4226,-4484,-151,-151
chr1:8025021-8025714	chr1	+	8025060	8025701	True	NM_001561,NM_007262,NM_001123377	chr1,chr1,chr1	-,+,+	TNFRSF9,PARK7,PARK7	-21835,-3406,-3406
chr20:54970884-54971122	chr20	+	54970889	54971156	True	NM_003600,NM_198433,NM_198434,NM_198435,NM_198436,NM_198437,NM_001033522,NM_001033521,NM_001324	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	-,-,-,-,-,-,+,+,+	AURKA,AURKA,AURKA,AURKA,AURKA,AURKA,CSTF1,CSTF1,CSTF1	-3538,-3538,-3538,-3538,-3538,-3538,-3240,-3520,-3373
chr3:61546002-61546327	chr3	+	61546146	61546290	True	NM_002841,NM_002012	chr3,chr3	+,-	PTPRG,FHIT	952,-309013
chr16:58032054-58032393	chr16	+	58032131	58032353	True	NM_001195302,NM_001204911,NM_020807,NM_024598	chr16,chr16,chr16,chr16	+,+,-,+	C16orf57,C16orf57,ZNF319,C16orf57	2923,2923,1459,2923
chr12:7901044-7901601	chr12	+	7901159	7901601	True	NM_203503,NM_001145465,NM_130441	chr12,chr12,chr12	-,+,-	CLEC4C,NANOGNB,CLEC4C	526,16210,526
chr19:38805412-38805618	chr19	+	38805548	38805630	True	NM_001039673,NM_001145461,NM_001039671,NM_001039672,NM_001145462,NM_033557,NM_001145463,NM_004823	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,+	YIF1B,YIF1B,YIF1B,YIF1B,YIF1B,YIF1B,YIF1B,KCNK6	1026,865,865,1026,865,-5039,1026,4853
chr6:56692033-56692982	chr6	+	56692474	56693031	True	NM_152731,NM_001723	chr6,chr6	+,-	BEND6,DST	126741,-184780
chr11:57437019-57437865	chr11	+	57437252	57437687	True	NM_015457,NM_145008	chr11,chr11	+,-	ZDHHC5,YPEL4	-1839,-19835
chr11:33100455-33101447	chr11	+	33100486	33101318	True	NR_015451,NM_001326	chr11,chr11	+,-	NCRNA00294,CSTF3	-2841,81770
chr19:18746519-18746983	chr19	+	18746524	18746970	True	NM_004750,NM_018316	chr19,chr19	-,+	CRLF1,KLHL26	-28864,867
chr11:67184756-67185050	chr11	+	67184806	67185096	True	NM_001166222,NM_020811,NM_206873	chr11,chr11,chr11	+,+,-	CARNS1,CARNS1,PPP1CA	-1708,-1708,-15430
chr10:98344377-98345974	chr10	+	98344914	98345919	True	NM_020123,NM_001170765	chr10,chr10	-,+	TM9SF3,LCOR	940,246097
chr2:740179-740894	chr2	+	740236	740922	True	NM_018968,NM_152834	chr2,chr2	+,-	SNTG2,TMEM18	205631,-62797
chr12:12966283-12967770	chr12	+	12966308	12967458	True	NM_016355,NM_201224,NM_006143	chr12,chr12,chr12	+,+,-	DDX47,DDX47,GPR19	-79,-79,-117187
chr13:38363464-38365387	chr13	+	38363587	38364966	True	NM_001135955,NM_016617	chr13,chr13	-,+	TRPC4,UFM1	79026,558975
chr17:68083130-68083702	chr17	+	68083343	68083571	True	NM_170741,NR_036534	chr17,chr17	+,-	KCNJ16,FLJ36644	-11978,82022
chr2:20790351-20792221	chr2	+	20790429	20792203	True	NM_022460,NM_182828	chr2,chr2	-,+	HS1BP3,GDF7	58711,74220
chr11:118995167-118995604	chr11	+	118995183	118995412	True	NM_015517,NM_198971,NM_001382	chr11,chr11,chr11	+,+,-	HINFP,HINFP,DPAGT1	-2953,-2953,-22398
chr17:73128322-73128719	chr17	+	73128531	73128718	True	NM_014595,NM_024585	chr17,chr17	-,+	NT5C,ARMC7	-654,-22500
chr19:22017483-22017763	chr19	+	22017526	22017744	True	NR_024523,NM_003423	chr19,chr19	+,-	LOC641367,ZNF43	-84030,1286
chr9:117262016-117262586	chr9	+	117262069	117262521	True	NM_001083885,NM_004888,NM_001173425,NM_015404	chr9,chr9,chr9,chr9	-,+,-,-	DFNB31,ATP6V1G1,DFNB31,DFNB31	3024,87472,5265,5265
chr11:65640864-65641069	chr11	+	65640989	65641063	True	NR_037718,NM_016938,NM_001335	chr11,chr11,chr11	-,-,+	EFEMP2,EFEMP2,CTSW	-584,-584,6220
chr12:120877184-120878359	chr12	+	120877475	120878269	True	NM_016399,NM_004373,NM_176818,NR_033684	chr12,chr12,chr12,chr12	-,+,+,+	TRIAP1,COX6A1,GATC,GATC	5996,-1623,5971,5971
chr16:62065713-62067695	chr16	+	62065736	62067288	True	NM_001796,NM_024860	chr16,chr16	-,+	CDH8,SETD6	3501,-3516406
chr16:69960800-69961137	chr16	+	69960807	69961079	True	NR_029681,NM_199424,NR_003610	chr16,chr16,chr16	+,+,-	MIR140,WWP2,PDXDC2P	5904,-1957,138822
chr13:29067937-29068184	chr13	+	29067994	29068118	True	NM_015932,NM_001159920,NM_001160031,NM_001160030,NM_002019	chr13,chr13,chr13,chr13,chr13	+,-,-,-,-	POMP,FLT1,FLT1,FLT1,FLT1	165022,1197,1197,1197,1197
chr7:73099492-73099736	chr7	+	73099717	73099785	True	NR_037776,NM_017528,NM_001202560,NM_032317	chr7,chr7,chr7,chr7	+,+,+,-	WBSCR22,WBSCR22,WBSCR22,DNAJC30	-1870,-1870,-1870,-1936
chr20:18488795-18489608	chr20	+	18488882	18489356	True	NM_006606,NM_006363,NM_032986,NM_032985,NM_001172746,NM_001172745	chr20,chr20,chr20,chr20,chr20,chr20	-,+,+,+,+,+	RBBP9,SEC23B,SEC23B,SEC23B,SEC23B,SEC23B	-10995,-745,-745,-745,-723,-326
chr7:151217945-151218673	chr7	+	151218020	151218478	True	NM_005614,NR_034013	chr7,chr7	-,+	RHEB,LOC100131176	-1010,-111749
chr12:107487401-107487677	chr12	+	107487450	107487692	True	NM_004075,NM_152261	chr12,chr12	-,+	CRY1,C12orf23	-44,-137957
chr12:131005539-131005919	chr12	+	131005623	131005901	True	NM_004764,NM_015347	chr12,chr12	+,-	PIWIL1,RIMBP2	-183241,-3213
chr6:12292242-12292652	chr6	+	12292245	12292545	True	NM_001168319,NM_032744,NM_001955	chr6,chr6,chr6	+,-,+	EDN1,C6orf105,EDN1	-1767,-512965,-1767
chr19:49577301-49577812	chr19	+	49577355	49577471	True	NM_031886,NM_003089	chr19,chr19	-,+	KCNA7,SNRNP70	-1157,10993
chr19:41281723-41282187	chr19	+	41281726	41281846	True	NR_037791,NM_198476,NM_006533,NR_037775,NM_001202553,NM_016154	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+	RAB4B-EGLN2,C19orf54,MIA,MIA-RAB4B,MIA,RAB4B	2277,-25898,-495,-335,-695,2277
chr19:4303341-4304621	chr19	+	4303919	4304383	True	NM_024333,NM_001169126,NM_144615	chr19,chr19,chr19	+,-,-	FSD1,TMIGD2,TMIGD2	207,-1491,-1491
chr10:75504387-75504697	chr10	+	75504408	75504750	True	NM_198597,NR_026592,NM_004922	chr10,chr10,chr10	+,-,+	SEC24C,BMS1P4,SEC24C	-328,-14136,-328
chr5:108120582-108122292	chr5	+	108120698	108122168	True	NM_005246,NM_001163315	chr5,chr5	+,-	FER,FBXL17	-37226,-402899
chr8:41755990-41756472	chr8	+	41755993	41756471	True	NM_001134296,NM_001142446	chr8,chr8	+,-	AP3M2,ANK1	253992,-1713
chr10:133793792-133794463	chr10	+	133793792	133794364	True	NM_004052,NR_033191	chr10,chr10	-,+	BNIP3,PPP2R2D	1122,-45885
chr1:153699264-153699754	chr1	+	153699362	153699660	True	NM_023015,NM_004515	chr1,chr1	+,-	INTS3,ILF2	906,-55883
chr8:6793776-6794367	chr8	+	6793782	6794314	True	NM_018361,NM_001925	chr8,chr8	+,-	AGPAT5,DEFA4	-227968,1522
chr2:27273725-27274203	chr2	+	27273812	27274232	True	NM_001035507,NM_021831,NM_001134693	chr2,chr2,chr2	+,+,-	AGBL5,AGBL5,OST4	258,258,20385
chr7:143531887-143532295	chr7	+	143532226	143532334	True	NR_015421,NM_001004685	chr7,chr7	-,+	LOC154761,OR2F2	1526,99991
chr7:143531887-143532295	chr7	-	143319511	143319619	False	NM_178561,NM_001130025,NM_173678	chr7,chr7,chr7	-,+,+	CTAGE6P,FAM115C,FAM115C	135274,-1517,-1020
chr7:143531887-143532295	chr7	-	143398700	143398808	False	NM_178561,NM_001130026	chr7,chr7	-,+	CTAGE6P,FAM115C	56085,14130
chr1:224024051-224025181	chr1	+	224024069	224025179	True	NM_001031685,NM_005426,NM_001748	chr1,chr1,chr1	-,-,+	TP53BP2,TP53BP2,CAPN2	8545,8545,-124002
chr1:207193485-207194234	chr1	+	207193555	207194137	True	NM_001083924,NM_006212	chr1,chr1	-,+	C1orf116,PFKFB2	12014,32482
chr13:98793479-98794438	chr13	+	98793497	98794311	True	NM_178861,NM_001001715,NM_005766	chr13,chr13,chr13	-,+,+	RNF113B,FARP1,FARP1	35260,1122,1122
chr22:19416751-19417779	chr22	+	19417014	19417684	True	NM_003776,NM_003325	chr22,chr22	+,-	MRPL40,HIRA	2351,1585
chr10:81106710-81107038	chr10	+	81106754	81107044	True	NM_005729,NM_153367	chr10,chr10	+,-	PPIF,ZCCHC24	175,98389
chr17:42248356-42248653	chr17	+	42248368	42248638	True	NM_178542,NM_080863	chr17,chr17	-,+	C17orf65,ASB16	15494,-345
chr7:129845830-129846542	chr7	+	129845830	129846549	True	NM_145268,NM_032842	chr7,chr7	+,-	C7orf45,TMEM209	1154,-492
chr13:111520288-111522018	chr13	+	111520358	111521831	True	NM_005537,NR_027701	chr13,chr13	+,-	ING1,C13orf29	-153050,881
chr16:48684023-48685669	chr16	+	48684213	48685525	True	NM_153029,NM_031490	chr16,chr16	-,+	N4BP1,LONP2	-40093,-406053
chr16:85341632-85341917	chr16	+	85341701	85341837	True	NR_033984,NM_198491	chr16,chr16	+,-	LOC400548,FAM92B	-170996,-195587
chr10:125803835-125804105	chr10	+	125803889	125804151	True	NM_015892,NM_001167880	chr10,chr10	-,+	CHST15,LHPP	47829,346189
chr4:170529929-170531555	chr4	+	170530304	170531162	True	NM_001199398,NM_001199399,NM_001829,NM_001199397,NM_012224,NM_001199400	chr4,chr4,chr4,chr4,chr4,chr4	-,-,+,-,-,-	NEK1,NEK1,CLCN3,NEK1,NEK1,NEK1	2672,2672,10559,2672,2672,2672
chr4:697587-697995	chr4	+	697667	697901	True	NM_006315,NM_032219	chr4,chr4	+,-	PCGF3,MFSD7	1671,-14694
chr9:139871008-139871896	chr9	+	139871055	139871529	True	NM_000954,NM_004669,NM_207510	chr9,chr9,chr9	+,-,+	PTGDS,CLIC3,LCNL1	426,19545,5915
chr5:72696910-72697664	chr5	+	72696957	72697545	True	NM_004472,NM_001037637	chr5,chr5	-,+	FOXD1,BTF3	46858,96704
chr22:25965515-25966682	chr22	+	25965531	25966536	True	NM_001135772,NM_005160	chr22,chr22	-,+	LRP5L,ADRBK2	-187987,-4721
chr12:124199196-124201057	chr12	+	124199240	124201061	True	NM_012463,NM_001414	chr12,chr12	+,-	ATP6V0A2,EIF2B1	-2429,-80917
chr20:36324447-36325303	chr20	+	36324447	36325194	True	NM_006698,NM_030877	chr20,chr20	-,+	BLCAP,CTNNBL1	-168114,-2071
chr11:17372040-17372360	chr11	+	17372149	17372381	True	NM_000525,NM_001202439	chr11,chr11	-,+	KCNJ11,DKFZp686O24166	37875,927
chr10:21462169-21462405	chr10	+	21462169	21462315	True	NM_001173484,NM_001195627,NM_213569	chr10,chr10,chr10	-,+,-	NEBL,MLLT10,NEBL	851,360785,851
chr6:168225437-168225918	chr6	+	168225450	168225921	True	NR_027906,NM_001040000	chr6,chr6	-,+	C6orf124,MLLT4	1605,1749
chr20:61552762-61553516	chr20	+	61552766	61552984	True	NM_001193370,NM_017896,NM_001193369,NM_080796	chr20,chr20,chr20,chr20	-,+,-,-	DIDO1,C20orf11,DIDO1,DIDO1	4977,16456,4977,4977
chr1:165798427-165799652	chr1	+	165798543	165799065	True	NM_019026,NM_012474	chr1,chr1	-,+	TMCO1,UCK2	-60408,-1868
chr8:23387498-23387944	chr8	+	23387515	23387943	True	NM_016612,NM_001128930	chr8,chr8	+,-	SLC25A37,ENTPD4	-1203,-72271
chr3:40427882-40428146	chr3	+	40427881	40428115	True	NM_001248,NR_033965	chr3,chr3	+,-	ENTPD3,FLJ33065	557,-76692
chr15:90934392-90936067	chr15	+	90934503	90935503	True	NR_028287,NM_003870	chr15,chr15	-,+	GABARAPL3,IQGAP1	-41824,-3086
chr8:86107131-86107339	chr8	+	86107268	86107342	True	NM_001083589,NM_001099670	chr8,chr8	+,-	E2F5,C8orf59	-7409,25351
chr1:47489464-47489733	chr1	+	47489498	47489758	True	NM_000778,NM_178033	chr1,chr1	-,+	CYP4A11,CYP4X1	-82342,-309
chr11:89658548-89658862	chr11	+	89658726	89658910	True	NM_001105522	chr11	+	TRIM49L1	-1553
chr11:89658548-89658862	chr11	-	89651897	89652081	False	NM_001105522	chr11	-	TRIM49L1	1553
chr16:85726179-85727049	chr16	+	85726383	85726741	True	NM_014615,NM_016095	chr16,chr16	+,-	KIAA0182,GINS2	-79511,-3795
chr17:61561625-61561889	chr17	+	61561739	61561923	True	NM_152830,NM_001915,NM_000789,NM_001178057	chr17,chr17,chr17,chr17	+,-,+,+	ACE,CYB561,ACE,ACE	254,-38017,-7368,254
chr22:30871348-30872044	chr22	+	30871353	30872043	True	NR_001580,NM_174975,NM_016498	chr22,chr22,chr22	-,-,+	SDC4P,SEC14L3,MTFP1	5750,-3319,-49793
chr22:35779906-35780115	chr22	+	35779980	35780042	True	NM_005368,NM_002133	chr22,chr22	-,+	MB,HMOX1	233392,-2971
chr4:174311927-174312438	chr4	+	174311971	174312473	True	NM_007281,NM_003864	chr4,chr4	-,+	SCRG1,SAP30	8194,-19935
chrX:107681452-107681735	chrX	+	107681522	107681774	True	NM_033641,NM_000495,NM_033380,NM_001847	chrX,chrX,chrX,chrX	-,+,+,-	COL4A6,COL4A5,COL4A5,COL4A6	32,1379,1379,980
chr17:19880123-19880749	chr17	+	19880168	19880708	True	NM_007202,NM_152904	chr17,chr17	-,+	AKAP10,SPECC1	471,109626
chr4:184836964-184837292	chr4	+	184837034	184837292	True	NM_020225,NM_152682	chr4,chr4	+,-	STOX2,RWDD4	-10576,-256703
chr1:22967867-22968264	chr1	+	22967873	22968299	True	NR_036214,NM_172369,NM_015991,NM_001114101	chr1,chr1,chr1,chr1	-,+,+,+	MIR4253,C1QC,C1QA,C1QC	221470,1818,-4806,1818
chr1:206733852-206734431	chr1	+	206733904	206734394	True	NM_182665,NM_001201478	chr1,chr1	+,-	RASSF5,EIF2D	-3463,51560
chr19:42748102-42748529	chr19	+	42748188	42748578	True	NM_019884,NM_133444	chr19,chr19	-,+	GSK3A,ZNF526	-1452,-23749
chr7:37484410-37486297	chr7	+	37484538	37486251	True	NM_181791,NM_014800	chr7,chr7	+,-	GPR141,ELMO1	293744,2310
chr14:105490817-105491412	chr14	+	105491188	105491374	True	NM_017955,NM_174891,NM_145701	chr14,chr14,chr14	-,+,-	CDCA4,C14orf79,CDCA4	-3763,-38625,-3763
chr10:95389348-95390392	chr10	+	95389719	95390301	True	NM_006744,NM_006204	chr10,chr10	-,+	RBP4,PDE6C	-28726,-17427
chr19:48956133-48956380	chr19	+	48956225	48956429	True	NM_013348,NM_001080434,NM_170720,NM_031485	chr19,chr19,chr19,chr19	+,-,+,+	KCNJ14,LMTK3,KCNJ14,GRWD1	2336,60067,8076,-7246
chr12:44229115-44229579	chr12	+	44229293	44229481	True	NM_002822,NM_032256	chr12,chr12	-,+	TWF1,TMEM117	-29115,480
chr2:232644198-232645343	chr2	+	232644292	232645330	True	NM_022730,NM_002601	chr2,chr2	+,-	COPS7B,PDE6D	5831,694
chr1:225653979-225655010	chr1	+	225654759	225654981	True	NM_194442,NM_001130440	chr1,chr1	-,+	LBR,SRP9	-38202,310533
chr1:145979545-145979912	chr1	+	145979629	145979955	True	NR_003377,NM_001097616	chr1,chr1	-,+	PDZK1P1,GPR89C	-37010,-95812
chr1:145979545-145979912	chr1	+	147521362	147521688	False	NR_003377,NM_001097616	chr1,chr1	-,+	PDZK1P1,GPR89C	-37031,-95846
chr17:6927463-6928515	chr17	+	6927663	6928524	True	NR_030178,NM_174893,NM_001142798,NM_001142799,NR_029712,NM_181844	chr17,chr17,chr17,chr17,chr17,chr17	-,+,+,+,-,+	MIR497,C17orf49,C17orf49,C17orf49,MIR195,BCL6B	-6322,-9659,-9659,-9659,-6643,-1346
chr1:206875985-206877853	chr1	+	206876050	206877871	True	NM_032960,NM_000572	chr1,chr1	+,-	MAPKAPK2,IL10	-17812,68019
chr20:41816793-41817282	chr20	+	41816859	41817229	True	NM_133170,NM_007050,NM_006275	chr20,chr20,chr20	-,-,+	PTPRT,PTPRT,SRSF6	1378,1378,269274
chrX:301996-302228	chrY	+	252006	252194	False	NR_027232,NM_013239	chrY,chrY	+,-	NCRNA00107,PPP2R3B	-20672,45546
chrX:301996-302228	chrX	+	302006	302194	True	NR_027232,NM_013239	chrX,chrX	+,-	NCRNA00107,PPP2R3B	-20672,45546
chr5:110075170-110076141	chr5	+	110075361	110076179	True	NM_001039763,NM_138773	chr5,chr5	-,+	TMEM232,SLC25A46	-12911,-666
chr15:65582970-65584525	chr15	+	65582972	65583727	True	NM_001101362,NM_017851	chr15,chr15	+,-	KBTBD13,PARP16	-213871,-3954
chr12:56075805-56076017	chr12	+	56075844	56076052	True	NM_001144996,NM_152637	chr12,chr12	-,+	ITGA7,METTL7B	25684,-565
chr12:13102597-13103595	chr12	+	13102790	13103328	True	NM_018654,NR_030345	chr12,chr12	-,+	GPRC5D,MIR614	40,-34078
chr6:27341926-27342524	chr6	+	27341992	27342546	True	NM_001076781,NR_024553,NR_002722	chr6,chr6,chr6	+,-,-	ZNF391,ZNF204P,ZNF204P	13977,657,-2688
chr17:42288641-42289679	chr17	+	42288648	42289374	True	NM_001076683,NM_001076684,NM_177441,NM_014233	chr17,chr17,chr17,chr17	-,-,+,-	UBTF,UBTF,TMUB2,UBTF	8926,7600,-24125,6340
chr1:27817167-27817402	chr1	+	27817186	27817410	True	NM_005281,NM_001201404,NM_006990	chr1,chr1,chr1	+,-,-	GPR3,WASF2,WASF2	-98085,-508,-508
chr4:26604153-26605933	chr4	+	26604508	26605558	True	NM_018317,NM_000730	chr4,chr4	+,-	TBC1D19,CCKAR	-19027,-112466
chr3:100340998-100341752	chr3	+	100341037	100341553	True	NM_032787,NM_014820	chr3,chr3	+,-	GPR128,TOMM70A	-12666,-220812
chr2:107119665-107120745	chr2	+	107119716	107120792	True	NM_001144013,NR_003506	chr2,chr2	-,+	RGPD3,PLGLA	-34915,-116998
chr2:107119665-107120745	chr2	-	87072033	87072083	False	NR_037931,NM_001178100	chr2,chr2	+,-	LOC100286979,CD8B	16864,17014
chr11:1633951-1634726	chr11	+	1634235	1634754	True	NM_001012709,NM_001012708,NM_001001480	chr11,chr11,chr11	-,-,+	KRTAP5-4,KRTAP5-3,KRTAP5-5	8664,-4542,16278
chr6:8434646-8435405	chr6	+	8434693	8435386	True	NM_015948,NR_004855,NM_001142541,NM_001142540	chr6,chr6,chr6,chr6	-,+,-,-	SLC35B3,HULC,SLC35B3,SLC35B3	458,217055,458,458
chr22:51116092-51116355	chr22	+	51116096	51116202	True	NM_001080420,NM_001085428	chr22,chr22	+,-	SHANK3,ARSA	-3077,-49495
chr14:99738498-99738770	chr14	+	99738544	99738810	True	NM_022898,NM_001099402,NM_138576	chr14,chr14,chr14	-,+,-	BCL11B,CCNK,BCL11B	-722,208928,-722
chr12:8024024-8025290	chr12	+	8024102	8025267	True	NM_153449,NM_024865	chr12,chr12	-,+	SLC2A14,NANOG	278,-82158
chr7:123147781-123148010	chr7	+	123147985	123148068	True	NM_080928,NM_178827	chr7,chr7	+,-	ASB15,IQUB	101043,26709
chr2:27359849-27360070	chr2	+	27359947	27360085	True	NM_175769,NM_178553,NM_013388	chr2,chr2,chr2	+,-,-	TCF23,C2orf53,PREB	11859,2297,-2405
chrY:1521772-1522248	chrY	+	1521897	1522143	True	NR_026711,NM_001173474,NM_001173473,NM_004192	chrY,chrY,chrY,chrY	+,-,-,-	ASMTL-AS1,ASMTL,ASMTL,ASMTL	-52524,-27,562,-27
chrY:1521772-1522248	chrX	+	1571897	1572143	False	NR_026711,NM_001173474,NM_001173473,NM_004192	chrX,chrX,chrX,chrX	+,-,-,-	ASMTL-AS1,ASMTL,ASMTL,ASMTL	-52524,-27,562,-27
chr2:169104601-169106124	chr2	+	169104603	169105871	True	NM_203463,NM_013233	chr2,chr2	+,-	LASS6,STK39	206963,-498
chr8:22425658-22426205	chr8	+	22426018	22426202	True	NR_027715,NM_001018003	chr8,chr8	-,+	FLJ14107,SORBS3	73570,-2890
chr19:14889924-14890331	chr19	+	14889988	14890309	True	NM_152917,NM_152916,NM_152919,NM_152918,NM_032433,NM_013447,NM_152920,NM_152921	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,+,-,-,-	EMR2,EMR2,EMR2,EMR2,ZNF333,EMR2,EMR2,EMR2	-635,-635,-635,-635,-89169,-635,-635,-635
chr19:14889924-14890331	chr19	-	14490223	14490273	False	NM_078481,NM_001025160,NM_001204057,NM_001784	chr19,chr19,chr19,chr19	+,+,-,+	CD97,CD97,DDX39A,CD97	1939,1939,39683,1939
chr19:57925560-57926237	chr19	+	57925744	57926085	True	NM_020633,NM_006959	chr19,chr19	-,+	VN1R1,ZNF17	42073,-3266
chr17:40916217-40916854	chr17	+	40916411	40916780	True	NR_024462,NR_024461,NM_032353,NM_005854	chr17,chr17,chr17,chr17	-,-,+,+	LOC100190938,LOC100190938,VPS25,RAMP2	-3136,-3136,8673,-3250
chrX:64628109-64628446	chrX	+	64628123	64628491	True	NM_001010888,NM_001170649	chrX,chrX	+,-	ZC3H12B,LAS1L	80123,126245
chr3:5226756-5227089	chr3	+	5226930	5227114	True	NM_014674,NR_037903	chr3,chr3	+,-	EDEM1,LOC100507582	2244,-278744
chr12:51244218-51244553	chr12	+	51244367	51244591	True	NM_182559,NM_001174130	chr12,chr12	+,-	TMPRSS12,SLC11A2	-7717,158512
chr17:17988956-17990602	chr17	+	17989151	17990114	True	NM_145691,NM_001388	chr17,chr17	-,+	ATPAF2,DRG2	-46671,1168
chr3:12703060-12704674	chr3	+	12703982	12704522	True	NM_002880,NM_014160	chr3,chr3	-,+	RAF1,MKRN2	1228,-105450
chr2:61109013-61109529	chr2	+	61109149	61109533	True	NM_002908,NR_033980	chr2,chr2	+,-	REL,FLJ16341	-448,-700
chr5:115151698-115152020	chr5	+	115151900	115152054	True	NM_001284,NM_001801	chr5,chr5	+,-	AP3S1,CDO1	25564,401
chr19:56705253-56705816	chr19	+	56705341	56705668	True	NM_033106,NM_001080456	chr19,chr19	+,-	GALP,ZSCAN5B	-18012,-920
chr11:102576467-102578306	chr11	+	102576602	102578160	True	NM_001166,NM_022122	chr11,chr11	+,-	BIRC2,MMP27	-358697,-134
chr14:67655701-67655972	chr14	+	67655700	67655958	True	NM_173526,NM_015994	chr14,chr14	+,-	FAM71D,ATP6V1D	151,170812
chr7:116588630-116590107	chr7	+	116588642	116589883	True	NR_002329,NR_002330,NM_021908,NM_018412	chr7,chr7,chr7,chr7	+,-,+,+	ST7OT4,ST7OT1,ST7,ST7	4069,4556,3497,3497
chr3:38036307-38037522	chr3	+	38036831	38037571	True	NM_015873,NM_001130964	chr3,chr3	+,-	VILL,PLCD1	-1804,28757
chr19:1752856-1753295	chr19	+	1753100	1753246	True	NM_001178002,NM_001080488	chr19,chr19	-,+	ATP8B3,ONECUT3	59003,415
chr19:47248120-47248645	chr19	+	47248143	47248582	True	NM_013403,NM_001039877,NM_001039885,NM_024301	chr19,chr19,chr19,chr19	-,-,+,+	STRN4,STRN4,FKRP,FKRP	1188,1188,720,720
chr1:153524340-153524934	chr1	+	153524660	153524919	True	NM_002960,NM_019554,NM_002961,NM_006271	chr1,chr1,chr1,chr1	-,-,-,+	S100A3,S100A4,S100A4,S100A1	-2926,-6378,-6378,75953
chr22:30280597-30281684	chr22	+	30280834	30281720	True	NM_021090,NM_153051,NM_153050,NM_032204	chr22,chr22,chr22,chr22	+,+,+,-	MTMR3,MTMR3,MTMR3,ASCC2	-1727,-1727,-1727,-46580
chr11:83396688-83398407	chr11	+	83396708	83398379	True	NM_182603,NM_001142702	chr11,chr11	+,-	ANKRD42,DLG2	-491468,-3240
chr17:40703920-40704976	chr17	+	40704162	40705020	True	NM_000413,NM_025233,NM_001042531,NM_001042530,NM_001042532,NM_013290,NM_001042529	chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,-,+	HSD17B1,COASY,COASY,COASY,COASY,PSMC3IP,COASY	-229,9071,9071,9071,9071,24777,9071
chr1:159825863-159827287	chr1	+	159826116	159827050	True	NM_020125,NM_001013661,NM_001134233	chr1,chr1,chr1	+,-,-	SLAMF8,VSIG8,C1orf204	-29688,5447,-979
chr17:52978438-52978918	chr17	+	52978447	52978957	True	NM_005486,NR_027941	chr17,chr17	+,-	TOM1L1,COX11	-446,67157
chr8:35094068-35094306	chr8	+	35094154	35094326	True	NM_080872,NM_024025	chr8,chr8	+,-	UNC5D,DUSP26	-1230,-1636715
chr11:57426714-57428505	chr11	+	57426985	57428547	True	NM_145008,NM_006831,NM_001142597,NM_015457	chr11,chr11,chr11,chr11	-,+,+,+	YPEL4,CLP1,CLP1,ZDHHC5	-9568,-1821,-1821,6926
chr9:104502692-104503356	chr9	+	104502732	104503287	True	NM_019592,NM_133445	chr9,chr9	+,-	RNF20,GRIN3A	-206662,-1870
chr9:130618822-130620392	chr9	+	130619033	130620389	True	NM_000118,NM_001114753,NM_001018078	chr9,chr9,chr9	-,-,+	ENG,ENG,FPGS	-1986,-1986,-53576
chr17:41323537-41323953	chr17	+	41323615	41324001	True	NM_007300,NM_031858,NM_005899,NM_031862	chr17,chr17,chr17,chr17	-,+,+,+	BRCA1,NBR1,NBR1,NBR1	-46115,-1155,-420,-1168
chr9:136243165-136243405	chr9	+	136243215	136243375	True	NM_153710,NM_033161	chr9,chr9	+,-	C9orf96,SURF4	18,-245
chr11:314952-315316	chr11	+	315002	315279	True	NM_006435,NM_021034,NM_003641	chr11,chr11,chr11	+,-,+	IFITM2,IFITM3,IFITM1	-6946,5686,-1062
chr14:36274570-36275084	chr14	+	36274662	36274816	True	NM_014990,NM_194301,NM_032352	chr14,chr14,chr14	-,-,+	RALGAPA1,RALGAPA1,BRMS1L	3666,3666,20780
chr1:173452580-173452961	chr1	+	173452705	173452965	True	NR_037845,NM_004905	chr1,chr1	-,+	LOC100506023,PRDX6	-6411,-6283
chr20:42815548-42815763	chr20	+	42815627	42815703	True	NM_024034,NM_175913,NM_020433	chr20,chr20,chr20	+,-,-	GDAP1L1,JPH2,JPH2	60204,565,565
chr19:19845761-19846686	chr19	+	19845785	19846585	True	NM_033204,NM_021030	chr19,chr19	+,-	ZNF101,ZNF14	-66180,-1864
chr19:51875984-51876947	chr19	+	51876096	51876866	True	NM_001985,NM_152353,NR_033235,NM_005601	chr19,chr19,chr19,chr19	-,-,+,-	ETFB,CLDND2,LOC100129083,NKG7	-6424,-3839,42293,-136
chr12:57386479-57388196	chr12	+	57386478	57388083	True	NM_007264,NM_014830	chr12,chr12	+,-	GPR182,ZBTB39	271,12271
chrY:10028967-10029987	chrY	+	10028966	10029888	True	NR_003593,NR_003589	chrY,chrY	+,-	TTTY23B,TTTY1B	-280618,-417038
chr21:43915836-43916116	chr21	+	43915868	43916064	True	NM_080860,NM_018964	chr21,chr21	-,+	RSPH1,SLC37A1	387,3677
chr6:10019662-10019968	chr6	+	10019667	10019998	True	NM_001032280,NR_033910	chr6,chr6	-,+	TFAP2A,LOC100130275	392664,392552
chr2:241074383-241074655	chr2	+	241074391	241074607	True	NM_001163424,NM_148961,NM_138336,NM_002081	chr2,chr2,chr2,chr2	-,-,-,+	MYEOV2,OTOS,MYEOV2,GPC1	1190,5516,1207,300507
chr6:161060937-161061354	chr6	+	161060947	161061291	True	NM_001168338,NM_005577	chr6,chr6	+,-	PLG,LPA	61933,26166
chr6:161060937-161061354	chr6	+	161066494	161066838	False	NM_001168338,NM_005577	chr6,chr6	+,-	PLG,LPA	56386,20619
chr6:161060937-161061354	chr6	+	161038764	161039108	False	NM_001168338,NM_005577	chr6,chr6	+,-	PLG,LPA	84116,48349
chr6:161060937-161061354	chr6	+	161044310	161044654	False	NM_001168338,NM_005577	chr6,chr6	+,-	PLG,LPA	78570,42803
chr6:161060937-161061354	chr6	+	161049854	161050198	False	NM_001168338,NM_005577	chr6,chr6	+,-	PLG,LPA	73026,37259
chr11:82866905-82867596	chr11	+	82867170	82867616	True	NM_015885,NM_014488	chr11,chr11	+,-	PCF11,RAB30	520,-84286
chr13:24470083-24471021	chr13	+	24470094	24470684	True	NM_001135816,NM_005932,NM_001014442,NM_001007537	chr13,chr13,chr13,chr13	+,-,+,-	PCOTH,MIPEP,PCOTH,C1QTNF9B	-6553,-6507,-7117,491
chr8:26720899-26721522	chr8	+	26721226	26721496	True	NM_033302,NM_033303,NM_000680,NM_033304,NM_001386	chr8,chr8,chr8,chr8,chr8	-,-,-,-,+	ADRA1A,ADRA1A,ADRA1A,ADRA1A,DPYSL2	1476,1476,1476,1476,-285856
chr15:67543084-67543740	chr15	+	67543417	67543561	True	NM_001031715,NM_022784,NM_024666	chr15,chr15,chr15	+,+,-	IQCH,IQCH,AAGAB	3576,3576,3571
chr10:74915447-74917101	chr10	+	74916023	74916782	True	NM_173348,NM_001135752	chr10,chr10	+,-	FAM149B1,ECD	11094,11130
chr19:14781785-14782640	chr19	+	14781810	14782514	True	NM_032433,NM_032571	chr19,chr19	+,-	ZNF333,EMR3	18355,3268
chr8:125383824-125384027	chr8	+	125383842	125384056	True	NM_017956,NM_194291	chr8,chr8	+,-	TRMT12,TMEM65	78991,934
chr5:38418190-38419983	chr5	+	38418199	38419701	True	NM_001127671,NM_182799	chr5,chr5	-,+	LIFR,EGFLAM	137097,-14600
chr16:53087722-53088178	chr16	+	53087881	53088162	True	NR_033920,NM_025134	chr16,chr16	-,+	LOC643714,CHD9	-446994,782
chr2:203973799-203975579	chr2	+	203974176	203975047	True	NM_018256,NM_001114132	chr2,chr2	-,+	WDR12,NBEAL1	-197227,-94633
chr16:4474562-4475182	chr16	+	4474647	4475003	True	NM_005147,NM_001135110,NM_024535,NM_001201473,NM_001201472,NM_001201479	chr16,chr16,chr16,chr16,chr16,chr16	+,+,-,-,-,-	DNAJA3,DNAJA3,CORO7,CORO7,CORO7,CORO7-PAM16	854,854,-7685,-7685,-7685,-7685
chr5:72692279-72694059	chr5	+	72692421	72693811	True	NM_004472,NM_001037637	chr5,chr5	-,+	FOXD1,BTF3	50604,100438
chr1:162467078-162467347	chr1	+	162467220	162467389	True	NM_175866,NM_053282,NM_144624,NM_001184763	chr1,chr1,chr1,chr1	+,-,+,+	UHMK1,SH2D1B,UHMK1,UHMK1	205,-85292,205,-307
chr1:166809900-166810261	chr1	+	166809974	166810298	True	NM_017542,NM_053053	chr1,chr1	+,-	POGK,TADA1	-1305,35406
chr11:65817817-65818362	chr11	+	65818249	65818385	True	NM_033036,NM_006842	chr11,chr11	-,+	GAL3ST3,SF3B2	-1598,1430
chr1:25257390-25257762	chr1	+	25257471	25257643	True	NM_013943,NM_004350	chr1,chr1	+,-	CLIC4,RUNX3	-185762,-701
chr22:43809326-43809545	chr22	+	43809338	43809521	True	NM_173050,NM_001044370	chr22,chr22	-,+	SCUBE1,MPPED1	-69983,-1369
chr4:88232582-88233772	chr4	+	88232581	88233649	True	NM_001136230,NM_024047	chr4,chr4	-,+	HSD17B13,NUDT9	10457,110085
chr8:27469336-27470054	chr8	+	27469395	27470103	True	NM_001831,NM_016240,NM_203339,NM_001171138	chr8,chr8,chr8,chr8	-,+,-,-	CLU,SCARA3,CLU,CLU	2274,21473,-457,-127
chr9:139886931-139887131	chr9	+	139887088	139887176	True	NM_183241,NM_004669,NM_207510	chr9,chr9,chr9	+,-,+	C9orf142,CLIC3,LCNL1	-269,3898,-9694
chr1:14051993-14053840	chr1	+	14052245	14053523	True	NM_001010847,NM_012231	chr1,chr1	-,+	LRRC38,PRDM2	-212003,-20947
chr14:77845539-77846027	chr14	+	77845539	77846074	True	NM_001010860,NM_213601	chr14,chr14	+,-	SAMD15,TMED8	-1831,-2143
chr2:176969783-176970255	chr2	+	176969811	176970236	True	NM_001080458,NM_021192,NM_021193	chr2,chr2,chr2	-,+,+	EVX2,HOXD11,HOXD12	-21121,1847,-5332
chr6:70593286-70593946	chr6	+	70593326	70593955	True	NM_018368,NM_001858	chr6,chr6	-,+	LMBRD1,COL19A1	-86277,-16939
chr1:157972649-157972918	chr1	+	157972648	157972864	True	NM_018240,NR_033946	chr1,chr1	+,-	KIRREL,LOC646268	-9636,137624
chr7:42780718-42782148	chr7	+	42780765	42782088	True	NM_031903,NM_001099858	chr7,chr7	+,-	MRPL32,C7orf25	189850,169655
chr5:157099030-157099259	chr5	+	157099056	157099234	True	NM_001145132,NM_178424	chr5,chr5	+,-	C5orf52,SOX30	-548,-19628
chr5:140256464-140256675	chr5	+	140256472	140256600	True	NM_031865,NM_031864,NM_031861,NM_002109,NM_018903,NM_018902,NM_018904	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,-,+,+,+	PCDHA13,PCDHA12,PCDHA11,HARS,PCDHA12,PCDHA11,PCDHA13	5253,-1592,-8692,-185501,-1592,-8692,5253
chrX:153199560-153200069	chrX	+	153199739	153200091	True	NM_003491,NM_001164741,NM_001666,NM_001146151	chrX,chrX,chrX,chrX	-,-,-,+	NAA10,ARHGAP4,ARHGAP4,AVPR2	427,-8025,-8025,-29261
chr7:134211985-134212337	chr7	+	134212096	134212336	True	NM_001628,NM_020299	chr7,chr7	-,+	AKR1B1,AKR1B10	-68208,7
chr7:150553624-150554124	chr7	+	150553652	150554100	True	NM_001091,NM_014020	chr7,chr7	+,-	ABP1,TMEM176B	-4130,-55204
chr19:13067389-13067788	chr19	+	13067507	13067771	True	NM_005053,NM_052850	chr19,chr19	+,-	RAD23A,GADD45GIP1	-10912,329
chr8:37403861-37404495	chr8	+	37403861	37404293	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	149007,201321
chr21:44498211-44499055	chr21	+	44498412	44498994	True	NM_000394,NM_000071,NM_001178009,NM_001178008	chr21,chr21,chr21,chr21	+,-,-,-	CRYAA,CBS,CBS,CBS	90146,-2372,-1940,-1940
chr3:55520378-55520584	chr3	+	55520424	55520486	True	NM_003392,NM_001012506	chr3,chr3	-,+	WNT5A,CCDC66	895,1070697
chr2:55923468-55924616	chr2	+	55923753	55924289	True	NM_080667,NM_033109	chr2,chr2	+,-	CCDC104,PNPT1	-177065,-2742
chr7:86848671-86849003	chr7	+	86848708	86848942	True	NM_024315,NM_021145	chr7,chr7	-,+	C7orf23,DMTF1	139,-66889
chr6:121622331-121623073	chr6	+	121622858	121623114	True	NM_152730,NM_000165	chr6,chr6	-,+	C6orf170,GJA1	32582,133630
chr15:45113617-45113841	chr15	+	45113698	45113842	True	NM_182985,NM_001145112	chr15,chr15	+,-	TRIM69,PATL2	-85190,-144612
chr15:45113617-45113841	chr15	-	45371214	45371264	False	NM_207581,NM_014080	chr15,chr15	+,-	DUOXA2,DUOX2	35258,35145
chr5:140535915-140536611	chr5	+	140535919	140536628	True	NM_018939,NM_031947,NR_001280	chr5,chr5,chr5	+,-,+	PCDHB6,SLC25A2,PCDHB17	-6132,147035,-391
chr10:102028273-102030100	chr10	+	102028437	102029406	True	NM_018294,NM_005063	chr10,chr10	-,+	CWF19L1,SCD	-1000,77365
chr2:152826594-152828418	chr2	+	152826593	152828340	True	NM_001005747,NM_052905	chr2,chr2	-,+	CACNB4,FMNL2	2195,363410
chr2:111232622-111234299	chr2	+	111232709	111234293	True	NR_037626,NR_038099,NR_027467,NM_001205288,NR_027145,NM_033514	chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-	LOC100507334,LOC100288695,LIMS3,LOC100288695,LIMS3-LOC440895,LIMS3	-229546,-2057,-2057,-2057,-2057,-2057
chr2:111232622-111234299	chr2	-	109268037	109268091	False	NM_001193485,NM_022336	chr2,chr2	+,-	LIMS1,EDAR	3175,337791
chr2:111232622-111234299	chr2	-	110652367	110653951	False	NR_036225,NR_038099,NR_027467,NM_001205288,NR_027145,NM_033514	chr2,chr2,chr2,chr2,chr2,chr2	-,+,+,+,+,+	MIR4267,LOC100288695,LIMS3,LOC100288695,LIMS3-LOC440895,LIMS3	173719,2057,2057,2057,2057,2057
chr1:214160134-214160948	chr1	+	214160135	214160884	True	NR_037850,NM_002763	chr1,chr1	-,+	LOC100505832,PROX1	-20527,975
chr4:118955114-118955499	chr4	+	118955134	118955534	True	NM_004784,NM_003619	chr4,chr4	+,-	NDST3,PRSS12	20,318438
chr2:110551098-110551811	chr2	+	110551139	110551853	True	NM_178584,NM_001123363,NM_001037866,NM_032260,NM_005054	chr2,chr2,chr2,chr2,chr2	-,+,+,+,+	SEPT10,RGPD6,RGPD6,RGPD5,RGPD5	-179356,-855,-855,-855,112
chr2:110551098-110551811	chr2	+	109307608	109307670	False	NM_022336,NM_006267	chr2,chr2	-,+	EDAR,RANBP2	298220,28266
chr2:110551098-110551811	chr2	-	113191273	113191570	False	NM_153712,NM_005054,NM_001164463	chr2,chr2,chr2	+,-,-	TTL,RGPD5,RGPD8	48172,-166,-51
chr2:110551098-110551811	chr2	-	111334790	111335504	False	NM_001142807,NM_001037866,NM_001123363,NM_032260,NM_005054	chr2,chr2,chr2,chr2,chr2	+,-,-,-,-	ACOXL,RGPD6,RGPD6,RGPD5,RGPD5	154645,855,855,855,-112
chr1:21042960-21043216	chr1	+	21042966	21043258	True	NM_020816,NM_001122819,NM_032409	chr1,chr1,chr1	-,-,+	KIF17,KIF17,PINK1	1109,1109,-83069
chr6:35465545-35465758	chr6	+	35465604	35465676	True	NM_007104,NM_003214	chr6,chr6	+,-	RPL10A,TEAD3	-29477,-743
chr15:91445265-91445659	chr15	+	91445433	91445597	True	NM_006122,NM_198527	chr15,chr15	+,-	MAN2A2,HDDC3	1822,30227
chr20:31593865-31594070	chr20	+	31593867	31594053	True	NM_025227,NM_080675	chr20,chr20	+,-	BPIL1,SUN5	1353,-1628
chr19:2165587-2165858	chr19	+	2165635	2165741	True	NM_003938,NM_032482	chr19,chr19	-,+	AP3D1,DOT1L	-14079,-1538
chr12:34171288-34171691	chr12	+	34171287	34171694	True	NM_198992,NM_032834	chr12,chr12	-,+	SYT10,ALG10	-578533,3521
chr13:43134872-43135553	chr13	+	43134981	43135425	True	NM_033012,NM_001002264	chr13,chr13	+,-	TNFSF11,EPSTI1	1446,431010
chr1:228269445-228269776	chr1	+	228269447	228269719	True	NM_001024227,NM_001024226,NM_024319,NM_001658,NM_001024228	chr1,chr1,chr1,chr1,chr1	+,+,-,+,+	ARF1,ARF1,C1orf35,ARF1,ARF1	1131,641,21353,641,1131
chr9:91147732-91148349	chr9	+	91147860	91148380	True	NM_001161625,NM_145283,NM_001100111	chr9,chr9,chr9	+,+,-	NXNL2,NXNL2,LOC286238	1635,1635,118745
chrX:148717448-148719104	chrX	+	148717621	148718773	True	NM_001011544,NM_001174092,NM_032508	chrX,chrX,chrX	+,-,-	MAGEA11,TMEM185A,TMEM185A	51129,-4134,-4134
chr4:121991643-121992040	chr4	+	121991798	121991988	True	NM_024574,NR_024365	chr4,chr4	-,+	C4orf31,LOC100192379	1735,693751
chr19:11493198-11493600	chr19	+	11493502	11493562	True	NM_000121,NM_175871,NR_033663	chr19,chr19,chr19	-,+,-	EPOR,C19orf39,EPOR	1506,-8170,1506
chr10:82224944-82225158	chr10	+	82225032	82225186	True	NM_030927,NM_138812	chr10,chr10	+,-	TSPAN14,DYDC1	-11045,-108532
chr1:32706609-32706890	chr1	+	32706632	32706929	True	NM_032648,NR_026850,NM_005356	chr1,chr1,chr1	+,-,+	FAM167B,MTMR9LP,LCK	5888,432,9910
chr22:30795426-30795658	chr22	+	30795528	30795700	True	NM_033382,NM_001204204,NM_001017981,NM_012429	chr22,chr22,chr22,chr22	+,+,-,+	SEC14L2,SEC14L2,RNF215,SEC14L2	-2649,-2649,-12226,-2649
chr18:61252302-61253360	chr18	+	61252528	61253344	True	NM_012397,NM_002974	chr18,chr18	+,-	SERPINB13,SERPINB4	1189,58208
chr22:26564766-26565079	chr22	+	26564802	26565114	True	NM_021115,NM_001184773,NM_001184776,NM_001184777,NM_001184774,NM_001184775,NM_152841	chr22,chr22,chr22,chr22,chr22,chr22,chr22	+,+,+,+,+,+,-	SEZ6L,SEZ6L,SEZ6L,SEZ6L,SEZ6L,SEZ6L,HPS4	325,325,325,325,325,325,310487
chr4:52886603-52887367	chr4	+	52886681	52887359	True	NM_145263,NM_001024611	chr4,chr4	+,-	SPATA18,LRRC66	30233,-2895
chr1:150209809-150210213	chr1	+	150210046	150210144	True	NM_012113,NM_001136478,NM_001136479,NM_030920	chr1,chr1,chr1,chr1	+,-,-,-	CA14,ANP32E,ANP32E,ANP32E	20073,-1542,-3020,-1542
chr2:11683208-11684024	chr2	+	11683223	11683887	True	NR_003095,NM_033090,NM_148903,NM_014668	chr2,chr2,chr2,chr2	-,+,+,+	E2F6,GREB1,GREB1,GREB1	-76926,-423,-3194,-9032
chr17:38372424-38373679	chr17	+	38373070	38373720	True	NM_133264,NM_021724	chr17,chr17	+,-	WIPF2,NR1D1	1853,-116097
chr11:112850267-112851678	chr11	+	112850287	112851708	True	NR_034101,NM_181351	chr11,chr11	-,+	LOC100288346,NCAM1	292965,-18343
chr2:182321539-182321828	chr2	+	182321572	182321782	True	NM_001030311,NM_000885	chr2,chr2	-,+	CERKL,ITGA4	200104,-4
chr10:30962792-30963593	chr10	+	30962798	30963105	True	NM_183058,NM_005204	chr10,chr10	-,+	LYZL2,MAP3K8	-44151,-239983
chr10:30962792-30963593	chr10	-	29799445	29799495	False	NR_030335,NR_003930	chr10,chr10	-,+	MIR604,LOC387647	34581,-100995
chr1:110881577-110882367	chr1	+	110881666	110882375	True	NM_001201545,NR_036595,NM_022768	chr1,chr1,chr1	+,-,+	RBM15,LOC440600,RBM15	49,46,49
chr2:3705679-3706054	chr2	+	3705720	3706072	True	NM_002936,NM_018436	chr2,chr2	-,+	RNASEH1,ALLC	-99780,15
chr4:186062688-186063568	chr4	+	186062740	186063582	True	NM_020827,NM_001151	chr4,chr4	-,+	KIAA1430,SLC25A4	61650,834
chr19:6671743-6672583	chr19	+	6671996	6672298	True	NM_003807,NM_172014,NM_004240	chr19,chr19,chr19	-,-,+	TNFSF14,TNFSF14,TRIP10	-1397,-1397,67408
chrY:23673308-23674278	chrY	+	23673700	23673896	True	NM_001006120,NM_005058,NR_001537,NM_001006121,NM_001006118	chrY,chrY,chrY,chrY,chrY	+,+,-,+,+	RBMY1D,RBMY1A1,TTTY13,RBMY1B,RBMY1E	-494,-500,82706,-534,-494
chrY:23673308-23674278	chrY	+	23697241	23697437	False	NM_001006120,NM_005058,NR_001537,NM_001006121	chrY,chrY,chrY,chrY	+,+,-,+	RBMY1D,RBMY1A1,TTTY13,RBMY1B	-494,-500,59165,-534
chrY:23673308-23674278	chrY	-	24040120	24040196	False	NM_001006120,NM_005058,NR_001527,NM_001006121,NM_001006118	chrY,chrY,chrY,chrY,chrY	-,-,+,-,-	RBMY1D,RBMY1A1,TTTY6,RBMY1B,RBMY1E	494,500,250915,534,494
chrY:23673308-23674278	chrY	-	24063661	24063737	False	NM_001006120,NM_001006121,NR_001527,NM_001006118	chrY,chrY,chrY,chrY	-,-,+,-	RBMY1D,RBMY1B,TTTY6,RBMY1E	494,534,227374,494
chr3:151035531-151036765	chr3	+	151035940	151036787	True	NM_053002,NM_023915	chr3,chr3	+,-	MED12L,GPR87	-231315,-1304
chr17:44656273-44656685	chr17_ctg5_hap1	+	1513326	1513448	False	NM_016632,NR_033799	chr17_ctg5_hap1,chr17_ctg5_hap1	-,+	ARL17A,NSFP1	486,11464
chr17:44656273-44656685	chr17_ctg5_hap1	-	392018	392398	False	NM_001039083,NM_001113738,NM_001103154,NM_016632,NM_006178	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	+,+,+,+,-	ARL17B,ARL17A,ARL17B,ARL17A,NSF	-457,-486,-457,-486,-11403
chr17:44656273-44656685	chr17	+	44656272	44656652	True	NM_001113738,NM_016632,NM_006178	chr17,chr17,chr17	-,-,+	ARL17A,ARL17A,NSF	486,486,11385
chr17:44656273-44656685	chr17	+	44438347	44438727	False	NM_001039083,NM_001113738,NM_001103154,NM_016632,NR_033799	chr17,chr17,chr17,chr17,chr17	-,-,-,-,+	ARL17B,ARL17A,ARL17B,ARL17A,NSFP1	457,486,457,486,11451
chr3:127317390-127318193	chr3	+	127317441	127318182	True	NM_001142646,NM_004526,NM_001136053	chr3,chr3,chr3	-,+,-	TPRA1,MCM2,TPRA1	-7873,-239,-7945
chr1:53703744-53703981	chr1	+	53703774	53703946	True	NM_000098,NM_002370	chr1,chr1	+,-	CPT2,MAGOH	-41724,386
chr16:70323410-70323673	chr16	+	70323416	70323610	True	NM_001014451,NM_001014449,NM_007242,NM_001605	chr16,chr16,chr16,chr16	+,+,+,-	DDX19B,DDX19B,DDX19B,AARS	9461,9461,9461,-4
chr1:31654619-31655013	chr1	+	31654694	31654910	True	NM_024522,NM_016505	chr1,chr1	-,+	NKAIN1,ZCCHC17	57874,114931
chr9:5886775-5888148	chr9	+	5886825	5888155	True	NM_024896,NM_005511	chr9,chr9	-,+	ERMP1,MLANA	-53744,2753
chr17:73629080-73629461	chr17	+	73629083	73629455	True	NR_028439,NM_001162995,NM_004259	chr17,chr17,chr17	+,+,-	LOC643008,LOC643008,RECQL5	3219,58,33860
chr2:219923544-219923786	chr2	+	219923550	219923820	True	NR_024385,NM_002181,NR_036081	chr2,chr2,chr2	+,-,-	LOC151300,IHH,MIR3131	-82595,1468,-78
chr5:81570175-81570403	chr5	+	81570260	81570332	True	NM_001017971,NM_001025	chr5,chr5	+,-	ATP6AP1L,RPS23	30833,3953
chr12:118574782-118575031	chr12	+	118574853	118575061	True	NM_002567,NM_019086	chr12,chr12	+,-	PEBP1,VSIG10	-1034,-33043
chr12:52004006-52005145	chr12	+	52004083	52004962	True	NM_014191,NM_007210	chr12,chr12	+,-	SCN8A,GALNT6	-19114,-218883
chr1:161390800-161391248	chr1	+	161390806	161390932	True	NM_001136219,NM_001013625	chr1,chr1	+,-	FCGR2A,C1orf192	84272,-53142
chr17:62950825-62951273	chr17	+	62951079	62951185	True	NR_026903,NM_001165933	chr17,chr17	-,+	AMZ2P1,RGS9	20568,182270
chr11:74955347-74955716	chr11	+	74955404	74955566	True	NM_001195528,NR_029891	chr11,chr11	+,-	LOC441617,MIR326	-3505,90714
chr7:23623127-23624932	chr7	+	23623261	23624906	True	NM_138771,NR_002711	chr7,chr7	+,-	CCDC126,CLK2P	12091,1290
chr16:57021296-57022650	chr16	+	57021395	57022519	True	NM_024946,NM_032206	chr16,chr16	-,+	FAM192A,NLRC5	197507,890
chr19:54825102-54826457	chr19	+	54825259	54825838	True	NM_181879,NM_021250,NM_181986,NM_001005367,NM_181985	chr19,chr19,chr19,chr19,chr19	-,-,-,+,-	LILRA5,LILRA5,LILRA5,TTYH1,LILRA5	-891,-850,-891,100766,-891
chr8:144503080-144503309	chr8	+	144503252	144503324	True	NM_201589,NM_052924	chr8,chr8	-,+	MAFA,RHPN1	9328,-52278
chr10:96958330-96959520	chr10	+	96958420	96958635	True	NM_207321,NM_020992	chr10,chr10	+,-	C10orf129,PDLIM1	-4524,92205
chr1:205476200-205476684	chr1	+	205476205	205476439	True	NM_212503,NM_002596,NR_027086,NM_212502	chr1,chr1,chr1,chr1	+,+,-,+	CDK18,CDK18,LOC284578,CDK18	-2572,-2572,49374,-2572
chr2:219281116-219281602	chr2	+	219281213	219281599	True	NM_007127,NM_022152	chr2,chr2	+,-	VIL1,TMBIM1	2238,-123933
chr17:53503811-53505252	chr17	+	53503867	53505137	True	NM_002126,NM_012329	chr17,chr17	+,-	HLF,MMD	-161606,-4526
chr7:18580942-18581749	chr7	+	18580945	18581596	True	NM_001204148,NM_175886	chr7,chr7	+,-	HDAC9,PRPS1L1	-32096,-513459
chr2:222826510-222827734	chr2	+	222826571	222827643	True	NM_153038,NM_001127366	chr2,chr2	+,-	CCDC140,PAX3	335222,336122
chr11:62391293-62392762	chr11	+	62391581	62392742	True	NM_012200,NM_000327	chr11,chr11	-,+	B3GAT3,ROM1	-2133,-11420
chr19:12901785-12902118	chr19	+	12901798	12902166	True	NM_002229,NM_005809	chr19,chr19	+,-	JUNB,PRDX2	143,10578
chr11:65326578-65326895	chr11	+	65326692	65326906	True	NM_001130144,NM_021070,NM_001164266,NM_006396	chr11,chr11,chr11,chr11	-,-,-,+	LTBP3,LTBP3,LTBP3,SSSCA1	-993,-993,-993,11036
chr2:205407182-205407853	chr2	+	205407272	205407898	True	NM_057177,NM_203365,NM_152526,NM_205863	chr2,chr2,chr2,chr2	+,-,+,+	PARD3B,RAPH1,PARD3B,PARD3B	2617,-1007214,2617,2617
chr10:11785033-11785255	chr10	+	11785105	11785227	True	NM_014688,NM_024693	chr10,chr10	-,+	USP6NL,ECHDC3	-131426,-800
chr18:47721728-47722069	chr18	+	47721867	47722019	True	NM_001039535,NM_001080467	chr18,chr18	+,-	SKA1,MYO5B	179372,-416
chrX:133780898-133782688	chrX	+	133781005	133782407	True	NM_021796,NM_001170780	chrX,chrX	-,+	PLAC1,FAM122C	10164,148035
chr8:16042042-16043039	chr8	+	16042411	16043067	True	NM_002445,NM_138716,NM_138715,NM_178234	chr8,chr8,chr8,chr8	-,-,-,+	MSR1,MSR1,MSR1,TUSC3	7283,7283,7283,-644874
chr17:43678366-43678576	chr11	-	45926567	45926726	False	NM_152312,NM_001080446	chr11,chr11	+,-	GYLTL1B,C11orf94	16469,2266
chr17:43678366-43678576	chr17_ctg5_hap1	+	544605	544845	False	NM_001193465,NR_034172	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	KIAA1267,LOC644246	18652,50591
chr17:43678366-43678576	chr17_ctg5_hap1	-	1189577	1189817	False	NR_026901,NR_037772	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LOC644172,CRHR1	-1189,-19124
chr17:43678366-43678576	chr17_ctg5_hap1	-	1409137	1409377	False	NR_002940,NM_016632	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LRRC37A4,ARL17A	71999,104557
chr17:43678366-43678576	chr17	+	43678369	43678609	True	NR_026901,NR_037772	chr17,chr17	-,+	LOC644172,CRHR1	1189,19100
chr17:43678366-43678576	chr17	-	44322038	44322278	False	NM_001193465,NM_014834	chr17,chr17	-,+	KIAA1267,LRRC37A	-19298,50218
chr1:205898011-205899101	chr1	+	205898302	205899100	True	NM_052934,NM_001123168	chr1,chr1	-,+	SLC26A9,FAM72A	13538,239810
chr2:203733409-203733972	chr2	+	203733721	203733787	True	NM_178231,NM_001104586,NM_138468	chr2,chr2,chr2	-,+,-	ICA1L,ALS2CR8,ICA1L	2464,43190,2640
chr17:63097600-63098186	chr17	+	63097606	63098234	True	NM_006572,NM_001165933	chr17,chr17	-,+	GNA13,RGS9	-44686,35221
chr9:35072504-35072952	chr9	+	35072604	35072990	True	NM_007126,NM_203299,NM_004629	chr9,chr9,chr9	-,+,-	VCP,C9orf131,FANCG	-39,-30432,7073
chr1:40106232-40107748	chr1	+	40106335	40107285	True	NM_014571,NM_203456	chr1,chr1	-,+	HEYL,PPIE	-987,97231
chrY:9573783-9574156	chrY	+	9573785	9574133	True	NR_003590,NR_003588,NR_001536	chrY,chrY,chrY	+,-,+	TTTY2B,TTTY21B,TTTY2	-3,-14880,-3
chrY:9573783-9574156	chrY	-	6296246	6296594	False	NR_001535,NR_003590,NR_001536	chrY,chrY,chrY	+,-,-	TTTY21,TTTY2B,TTTY2	14880,3,3
chr11:43386645-43387910	chr11	+	43387154	43387817	True	NM_018259,NR_033868	chr11,chr11	+,-	TTC17,LOC399881	-6775,-96235
chr1:25670618-25670849	chr1	+	25670739	25670907	True	NM_020485,NM_014313	chr1,chr1	-,+	RHCE,TMEM50A	76515,-6008
chr16:67361318-67362971	chr16	+	67361551	67362721	True	NM_018296,NM_001100915	chr16,chr16	+,-	LRRC36,KCTD19	-856,-890
chr1:9006384-9007436	chr1	+	9006458	9007481	True	NM_001215,NM_001428	chr1,chr1	+,-	CA6,ENO1	-594,-67307
chr20:43934552-43935414	chr20	+	43934826	43935316	True	NM_003833,NM_030592,NM_030590,NM_014276	chr20,chr20,chr20,chr20	-,-,-,+	MATN4,MATN4,MATN4,RBPJL	1701,1701,1701,174
chr19:3759420-3759745	chr19	+	3759424	3759736	True	NM_004886,NM_172251	chr19,chr19	-,+	APBA3,MRPL54	1987,2928
chr22:23877625-23879062	chr22	+	23877707	23878813	True	NM_153615,NM_020070	chr22,chr22	+,-	RGL4,IGLL1	154234,43736
chr14:105779710-105780387	chr14	+	105779837	105780381	True	NM_001519,NM_015197,NM_001100913	chr14,chr14,chr14	-,+,+	BRF1,PACS2,PACS2	-12508,699,699
chr6:28488453-28489705	chr6	+	28488562	28489676	True	NM_182701,NM_001509,NM_003996	chr6,chr6,chr6	-,+,+	GPX6,GPX5,GPX5	-4992,4112,4112
chr6:28488453-28489705	chr6_cox_hap2	+	10766	11880	False	NM_001509,NM_052923,NM_003996	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,-,+	GPX5,SCAND3,GPX5	4112,65486,4112
chr6:14807376-14808213	chr6	+	14807550	14808166	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	438360,855181
chr13:107078757-107080299	chr13	+	107078764	107080072	True	NM_004093,NR_034119	chr13,chr13	-,+	EFNB2,LOC728192	107366,-49904
chr9:35065977-35066675	chr9	+	35066615	35066723	True	NM_007126,NM_203299	chr9,chr9	-,+	VCP,C9orf131	6066,-24450
chr17:10634370-10634596	chr17	+	10634375	10634573	True	NM_001004313,NM_020233	chr17,chr17	-,+	TMEM220,C17orf48	-729,-33512
chr16:3494173-3495363	chr16	+	3494290	3495253	True	NM_001083601,NM_152457	chr16,chr16	+,-	NAT15,ZNF597	-674,-800
chr7:73670568-73671941	chr7	+	73670661	73671377	True	NM_181471,NM_003388,NM_002914	chr7,chr7,chr7	-,+,-	RFC2,CLIP2,RFC2	-1923,32427,-1923
chr9:35164172-35165707	chr9	+	35164334	35165246	True	NM_006377,NM_025182	chr9,chr9	+,-	UNC13B,KIAA1539	-2407,-48441
chr12:56753991-56754247	chr12	+	56754106	56754238	True	NM_198332,NM_005419,NM_016584,NM_001638	chr12,chr12,chr12,chr12	-,-,+,-	STAT2,STAT2,IL23A,APOF	-69,-69,-21494,2395
chr14:105887423-105887782	chr14	+	105887459	105887829	True	NM_004689,NM_001203258,NM_001519	chr14,chr14,chr14	+,+,-	MTA1,MTA1,BRF1	-1324,-1324,-120130
chr12:51784245-51785348	chr12	+	51784271	51785327	True	NM_004858,NM_007210	chr12,chr12	+,-	SLC4A8,GALNT6	33266,-77
chr6:42987836-42988178	chr6	+	42987954	42988216	True	NM_057161,NM_033112,NM_014623	chr6,chr6,chr6	+,+,-	KLHDC3,RRP36,MEA1	-6028,1168,-6336
chrX:119211748-119212513	chrX	+	119211915	119212318	True	NM_032498,NM_001099685	chrX,chrX	-,-	RHOXF2,RHOXF2B	-208,-208
chrX:119211748-119212513	chrX	-	119291849	119292258	False	NM_139282,NM_032498,NM_001099685	chrX,chrX,chrX	-,+,+	RHOXF1,RHOXF2,RHOXF2B	-42002,208,208
chr14:39855239-39856103	chr14	+	39855272	39856057	True	NM_203355,NM_203301	chr14,chr14	+,-	CTAGE5,FBXO33	-118995,45710
chr7:141942315-141942611	chr7	+	141942323	141942655	True	NR_024346,NR_003717	chr7,chr7	-,+	MOXD2P,LOC100124692	4287,-71404
chr10:53459406-53459958	chr10	+	53459415	53459872	True	NR_030336,NM_015235	chr10,chr10	+,-	MIR605,CSTF2T	-400133,-60
chr6:128826339-128826769	chr6	+	128826622	128826825	True	NM_002844,NM_000426	chr6,chr6	-,+	PTPRK,LAMA2	15051,377460
chr2:74782577-74782812	chr2	+	74782658	74782812	True	NM_001197260,NM_001381,NM_032603	chr2,chr2,chr2	+,+,-	DOK1,DOK1,LOXL3	-6562,-1197,-1596
chr9:35859285-35860524	chr9	+	35859363	35860485	True	NM_001004487,NR_024006	chr9,chr9	-,+	OR13J1,LOC92973	9963,-94
chr5:1200482-1200767	chr5	+	1200548	1200784	True	NM_001003841,NM_006598	chr5,chr5	+,-	SLC6A19,SLC12A7	925,-88376
chr16:90017074-90017444	chr16	+	90017423	90017498	True	NM_207514,NM_017702,NM_145039	chr16,chr16,chr16	+,+,-	DEF8,DEF8,CENPBD1	-2298,-2330,21797
chr19:48056288-48057090	chr19	+	48056384	48057137	True	NM_015711,NM_001101419	chr19,chr19	+,-	GLTSCR1,ZNF541	54315,2027
chr17:17988121-17988588	chr17	+	17988244	17988331	True	NM_145691,NM_001388	chr17,chr17	-,+	ATPAF2,DRG2	-45764,2951
chr12:6742053-6742555	chr12	+	6742257	6742567	True	NM_001164094,NM_001142961,NM_020400	chr12,chr12,chr12	+,-,-	COPS7A,LPAR5,LPAR5	90582,-1442,2780
chr14:24912344-24913220	chr14	+	24912592	24912949	True	NM_015299,NM_020195	chr14,chr14	+,-	KHNYN,SDR39U1	-13508,-585
chr20:43844264-43846019	chr20	+	43845029	43846064	True	NM_003007,NM_003064,NM_003008	chr20,chr20,chr20	+,-,+	SEMG1,SLPI,SEMG2	-9451,37192,3945
chr1:1820199-1821427	chr1	+	1820289	1821305	True	NM_002074,NM_138705	chr1,chr1	-,+	GNB1,CALML6	1272,24960
chr12:58085160-58086667	chr12	+	58085939	58086318	True	NM_006812,NM_001017958,NM_001122772,NM_001017957,NM_001017956	chr12,chr12,chr12,chr12,chr12	+,+,-,+,+	OS9,OS9,AGAP2,OS9,OS9	1419,1419,45768,1419,1419
chr5:67521937-67522710	chr5	+	67521950	67522623	True	NM_005582,NM_181523	chr5,chr5	-,+	CD180,PIK3R1	-1029333,-28
chr9:124262931-124264114	chr9	+	124263150	124264102	True	NR_003191,NM_032552	chr9,chr9	-,+	GGTA1,DAB2IP	-844,65296
chr13:95135662-95135967	chr13	+	95135703	95135766	True	NM_001922,NM_001129889,NM_180989	chr13,chr13,chr13	-,-,+	DCT,DCT,GPR180	-3767,-3767,118337
chr1:11724941-11725372	chr1	+	11724980	11725094	True	NM_018438,NM_012168	chr1,chr1	+,-	FBXO6,FBXO2	-881,-10092
chr14:23651721-23652034	chr14	+	23651724	23652012	True	NM_012244,NM_017924	chr14,chr14	-,+	SLC7A8,C14orf119	887,-86987
chr6:34543301-34543834	chr6	+	34543367	34543429	True	NM_001199583,NM_012391	chr6,chr6	+,-	PACSIN1,SPDEF	-60769,-19276
chr13:53421841-53422093	chr13	+	53421841	53422107	True	NR_031582,NM_032949,NM_002590	chr13,chr13,chr13	+,-,-	MIR759,PCDH8,PCDH8	-37707,718,718
chr15:99057955-99058485	chr15	+	99058010	99058458	True	NM_182562,NM_000875	chr15,chr15	-,+	FAM169B,IGF1R	-399,134302
chr11:64004270-64004931	chr11	+	64004587	64004721	True	NM_057092,NM_138689,NM_005528,NM_003377,NM_004470,NM_001135208	chr11,chr11,chr11,chr11,chr11,chr11	+,-,+,+,+,+	FKBP2,PPP1R14B,DNAJC4,VEGFB,FKBP2,FKBP2	4866,9742,-6885,-2372,3691,3882
chr1:53532655-53532868	chr1	+	53532673	53532763	True	NM_153703,NM_006671,NM_001199082,NM_001199080,NM_001199081	chr1,chr1,chr1,chr1,chr1	+,-,+,+,+	PODN,SLC1A7,PODN,PODN,PODN	-5000,75576,-5000,-5000,-4839
chr12:6556748-6557434	chr12	+	6557083	6557400	True	NM_001242,NM_018009,NR_015382	chr12,chr12,chr12	+,+,-	CD27,TAPBPL,LOC678655	-3083,3776,3340
chr10:120790204-120791401	chr10	+	120790338	120791307	True	NR_002917,NM_199461	chr10,chr10	-,+	SNORA19,NANOS1	28394,-1161
chr9:94113901-94115389	chr9	+	94114581	94115371	True	NM_001698,NR_037472	chr9,chr9	-,+	AUH,MIR3910-1	8890,283161
chrX:70754808-70756304	chrX	+	70754903	70756341	True	NM_181672,NM_181673,NR_002226	chrX,chrX,chrX	+,+,-	OGT,OGT,INGX	-2042,-2042,-42299
chr9:88714687-88715066	chr9	+	88714844	88715102	True	NM_177937,NM_024635,NM_016548	chr9,chr9,chr9	-,+,-	GOLM1,NAA35,GOLM1	64,-158838,-334
chr3:36939516-36939795	chr3	+	36939517	36939617	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	46981,95223
chr10:10993590-10994131	chr10	+	10993709	10994184	True	NM_001025077,NR_024411,NR_024410,NR_015413	chr10,chr10,chr10,chr10	+,-,-,-	CELF2,LOC254312,LOC254312,LOC254312	53074,-1,-1,-1
chr11:31531524-31532667	chr11	+	31531698	31532642	True	NM_144981,NM_019040	chr11,chr11	-,+	IMMP1L,ELP4	-529,-452
chr17:79997394-79997702	chr17	+	79997447	79997673	True	NM_016286,NM_005052,NM_001195218	chr17,chr17,chr17	-,+,-	DCXR,RAC3,DCXR	-1874,-7966,-1874
chr1:145231280-145231859	chr1	+	145231412	145231811	True	NM_203458,NM_022359	chr1,chr1	+,-	NOTCH2NL,PDE4DIP	-22352,-155226
chr1:145231280-145231859	chr1	-	120589633	120590032	False	NM_024408,NM_001100910	chr1,chr1	-,+	NOTCH2,FAM72B	22335,248972
chr4:81182305-81183284	chr4	+	81182672	81183225	True	NM_001145794,NM_004464,NM_033143	chr4,chr4,chr4	-,+,+	ANTXR2,FGF5,FGF5	-188195,4516,4516
chr20:33542211-33542752	chr20	+	33542387	33542667	True	NM_000178,NM_020884	chr20,chr20	-,+	GSS,MYH7B	984,1036
chr4:32141297-32143145	chr4	+	32141431	32142912	True	NM_015230,NM_032457	chr4,chr4	-,+	ARAP2,PCDH7	4103125,-1419445
chr15:66546711-66546978	chr15	+	66546732	66546962	True	NM_133375,NM_032445	chr15,chr15	+,-	DIS3L,MEGF11	38670,-657
chr10:104262489-104263678	chr10	+	104262595	104263508	True	NM_001178133,NM_005736,NM_016169	chr10,chr10,chr10	+,-,+	SUFU,ACTR1A,SUFU	210,-83,210
chrX:48754724-48754980	chrX	+	48754749	48755025	True	NM_001032384,NM_001032381,NM_005834,NM_001032383,NM_001032382,NM_005710,NM_001167947,NM_001167989,NM_001167990,NM_144495,NM_001167992	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,-,+,+,+,-,+,+,+,+	PQBP1,PQBP1,TIMM17B,PQBP1,PQBP1,PQBP1,TIMM17B,PQBP1,PQBP1,PQBP1,PQBP1	513,169,451,169,169,513,451,169,187,169,749
chr16:3286151-3287456	chr16	+	3286169	3287134	True	NR_002169,NM_003454,NM_001145447,NM_001145446,NM_198087,NM_001145448,NM_198088	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,-,-,-,-	OR1F2P,ZNF200,ZNF200,ZNF200,ZNF200,ZNF200,ZNF200	-20664,-983,-983,-712,-712,-713,-713
chr3:13690430-13691923	chr3	+	13690580	13691939	True	NM_004625,NR_027103,NM_024923	chr3,chr3,chr3	-,+,-	WNT7A,LOC285375,NUP210	229729,281,-228771
chr10:26728512-26728738	chr10	+	26728565	26728763	True	NM_001012750,NM_019043	chr10,chr10	-,+	ABI1,APBB1IP	421307,-1356
chr20:7897399-7899254	chr20	+	7897409	7899144	True	NM_015192,NM_017545	chr20,chr20	+,-	PLCB1,HAO1	214151,22004
chr13:113758365-113759225	chr13	+	113758687	113759207	True	NM_001127202,NM_019616,NM_000131	chr13,chr13,chr13	-,+,+	PCID2,F7,F7	103872,897,897
chr7:16461242-16461626	chr7	+	16461272	16461548	True	NM_001195280,NM_001101417,NM_001101426	chr7,chr7,chr7	+,-,-	LOC100506049,ISPD,ISPD	104956,-325,-325
chr19:50978636-50979272	chr19	+	50978836	50979170	True	NM_138411,NM_175063,NM_206538	chr19,chr19,chr19	-,+,+	FAM71E1,C19orf63,C19orf63	883,565,565
chr8:37377978-37378259	chr8	+	37377987	37378255	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	175045,227359
chr19:56459365-56460897	chr19	+	56459395	56460339	True	NM_176810,NM_176811	chr19,chr19	-,+	NLRP13,NLRP8	-15693,-248
chr19:36018998-36020324	chr19	+	36019050	36020333	True	NM_001166035,NM_001166034,NM_014364,NM_198538	chr19,chr19,chr19,chr19	-,-,+,-	SBSN,SBSN,GAPDHS,SBSN	91,91,3980,91
chr10:135040193-135040580	chr10	+	135040206	135040436	True	NR_030170,NM_003577	chr10,chr10	-,+	MIR202,UTF1	20738,3341
chr12:54580284-54581744	chr12	+	54580482	54581706	True	NR_026656,NM_014311	chr12,chr12	+,-	LOC400043,SMUG1	-60678,1101
chr20:36160510-36161552	chr20	+	36160512	36161177	True	NM_181689,NM_001167820,NM_001167823,NM_001167822,NM_006698,NM_001167821	chr20,chr20,chr20,chr20,chr20,chr20	+,-,-,-,-,-	NNAT,BLCAP,BLCAP,BLCAP,BLCAP,BLCAP	-10956,-4179,-7559,-4429,-4179,-4378
chr2:202295580-202297108	chr2	+	202295731	202297140	True	NM_015049,NM_018571	chr2,chr2	-,+	TRAK2,STRADB	19232,19251
chr16:31405011-31405306	chr16	+	31405115	31405175	True	NM_005353,NM_005205	chr16,chr16	+,-	ITGAD,COX6A2	-533,34624
chr19:34664009-34664251	chr19	+	34664020	34664279	True	NM_001114093,NM_015578,NR_027620	chr19,chr19,chr19	+,+,-	LSM14A,LSM14A,LOC643719	-719,-719,404368
chr3:8813491-8814416	chr3	+	8813518	8814254	True	NM_001234,NM_000916	chr3,chr3	+,-	CAV3,OXTR	-38081,-2218
chr7:75506254-75507099	chr7	+	75506381	75506968	True	NM_001040456,NM_001040457,NM_002991	chr7,chr7,chr7	+,+,-	RHBDD2,RHBDD2,CCL24	1348,1348,-63348
chr4:30720405-30720936	chr4	+	30720427	30720951	True	NM_002589,NM_000730,NM_032457,NM_001173523,NM_032456	chr4,chr4,chr4,chr4,chr4	+,-,+,+,+	PCDH7,CCKAR,PCDH7,PCDH7,PCDH7	1085,-4228385,1085,1085,1078
chr2:85329385-85331122	chr2	+	85329434	85331027	True	NM_001080824,NM_031283	chr2,chr2	-,+	C2orf89,TCF7L1	-221182,29555
chr16:33964507-33964715	chr16	+	33964533	33964753	True	NR_027080,NR_002837	chr16,chr16	+,-	LOC283914,UBE2MP1	633033,440059
chr11:32458499-32459110	chr11	+	32458520	32458998	True	NM_024426,NM_001198551,NM_024424,NR_023920,NM_000378,NM_001198552	chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,+,-,-	WT1,WT1,WT1,WT1-AS,WT1,WT1	-1439,-6157,-1439,-1296,-1439,-6157
chr8:67579687-67580704	chr8	+	67579852	67580689	True	NM_019607,NM_001204173,NM_025054	chr8,chr8,chr8	+,+,-	C8orf44,C8orf44-SGK3,VCPIP1	-116,-116,-400
chr2:113297734-113298942	chr2	+	113298248	113298948	True	NM_001137604,NR_033871,NM_019014	chr2,chr2,chr2	+,-,+	POLR1B,FLJ42351,POLR1B	543,102859,543
chr9:113319575-113320507	chr9	+	113319905	113320375	True	NM_001166280,NM_153366	chr9,chr9	+,-	MUSK,SVEP1	110675,21842
chr15:45137098-45139009	chr15	+	45137386	45138957	True	NM_182985,NM_152448,NM_001145112	chr15,chr15,chr15	+,+,-	TRIM69,C15orf43,PATL2	-108877,109945,-168300
chr15:45137098-45139009	chr15	-	45336415	45336705	False	NR_034039,NM_014080	chr15,chr15	+,-	SORD,DUOX2	-21164,69704
chr6:167537797-167538927	chr6	+	167537816	167538862	True	NM_005299,NM_031409	chr6,chr6	-,+	GPR31,CCR6	32507,-1626
chr19:10734658-10736008	chr19	+	10735266	10735988	True	NM_020428,NR_024333	chr19,chr19	+,-	SLC44A2,LOC147727	182,28610
chr7:77168090-77168987	chr7	+	77168174	77168846	True	NM_001131008,NM_001131009,NM_017439,NM_002835	chr7,chr7,chr7,chr7	+,+,-,+	PTPN12,PTPN12,PION,PTPN12	-873,-873,-122457,-1452
chr15:85520864-85521729	chr15	+	85520901	85521653	True	NM_173454,NM_014300,NM_002605	chr15,chr15,chr15	+,-,+	PDE8A,SEC11A,PDE8A	3551,-261227,3551
chr19:31842835-31843046	chr19	+	31842890	31843042	True	NM_020856,NR_026894	chr19,chr19	-,+	TSHZ3,DKFZp566F0947	-2700,-202158
chr7:158645147-158646251	chr7	+	158645598	158646235	True	NM_020728,NM_018051	chr7,chr7	-,+	ESYT2,WDR60	-23279,3033
chr15:65117826-65118092	chr15	+	65117859	65118141	True	NM_001195059,NM_025049	chr15,chr15	+,-	PLEKHO2,PIF1	15940,-21
chr6:28501877-28503052	chr6	+	28501886	28503044	True	NM_001509,NM_182701,NM_003996	chr6,chr6,chr6	+,-,+	GPX5,GPX6,GPX5	-8148,-18316,-8148
chr6:28501877-28503052	chr6_cox_hap2	+	24090	25248	False	NM_001509,NM_052923,NM_003996	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,-,+	GPX5,SCAND3,GPX5	-8148,52118,-8148
chr7:75039964-75040611	chr7	+	75040110	75040653	True	NR_003614,NR_033322	chr7,chr7	-,+	PMS2L2,NSUN5P1	-51895,-537
chr7:75039964-75040611	chr7	-	72424253	72424796	False	NR_033323,NR_003602	chr7,chr7	-,+	NSUN5P2,LOC541473	556,15395
chr17:33290051-33291322	chr17	+	33290062	33291147	True	NM_006584,NM_052857,NM_001193530,NM_001193529	chr17,chr17,chr17,chr17	-,+,-,-	CCT6B,ZNF830,CCT6B,CCT6B	-1534,-1578,-1534,-1534
chr10:3108900-3109100	chr10	+	3108899	3109111	True	NM_002627,NM_014889	chr10,chr10	+,-	PFKP,PITRM1	640,105942
chr10:88864508-88865554	chr10	+	88864846	88865586	True	NM_019054,NM_005271	chr10,chr10	+,-	FAM35A,GLUD1	-9944,-10070
chr2:23700075-23700529	chr2	+	23700133	23700539	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	449445,-91886
chr11:625050-625380	chr11	+	625127	625325	True	NM_004031,NM_000797,NM_004029,NM_001171968,NM_021924,NM_021920,NM_001572,NM_031264	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,+,-,-,-,-,-,-	IRF7,DRD4,IRF7,CDHR5,CDHR5,SCT,IRF7,CDHR5	-9399,11979,-9128,-60,-60,1898,-9128,-60
chr5:121338826-121339839	chr5	+	121339079	121339893	True	NM_152546,NM_001178102	chr5,chr5	+,-	SRFBP1,LOX	-41483,73081
chr6:27777948-27778476	chr6	+	27778043	27778527	True	NM_003536,NM_003509,NM_003521,NM_003519,NM_021066	chr6,chr6,chr6,chr6,chr6	+,+,+,-,-	HIST1H3H,HIST1H2AI,HIST1H2BM,HIST1H2BL,HIST1H2AJ	-252,-2117,4294,-2334,4043
chr11:89576579-89576874	chr11	+	89576737	89576890	True	NM_001164397,NR_028346	chr11,chr11	-,+	TRIM64B,TRIM53	32346,-1632
chr11:89576579-89576874	chr11	-	49014570	49014629	False	NM_001014986,NM_001005512	chr11,chr11	-,+	FOLH1,OR4A47	215650,-504283
chr11:89576579-89576874	chr11	-	89733950	89734101	False	NR_028346,NM_001195234	chr11,chr11	-,+	TRIM53,TRIM49L2	1632,30172
chr1:12077895-12078205	chr1	+	12077909	12078254	True	NM_021933,NM_138346	chr1,chr1	+,-	MIIP,KIAA2013	1257,-91424
chr19:3700488-3700878	chr19	+	3700629	3700869	True	NM_014428,NM_012398,NM_001195733	chr19,chr19,chr19	+,-,-	TJP3,PIP5K1C,PIP5K1C	27504,-152,-152
chr9:35691289-35692224	chr9	+	35691382	35692257	True	NM_001216,NM_003289,NM_213674	chr9,chr9,chr9	+,-,-	CA9,TPM2,TPM2	-17518,-1329,-1329
chr15:30920374-30921678	chr15	+	30920600	30921478	True	NM_148911,NM_001039841	chr15,chr15	-,+	CHRFAM7A,ARHGAP11B	-234736,-1772
chr15:30920374-30921678	chr15	+	32910736	32910787	False	NM_014783,NM_199357,NR_036650	chr15,chr15,chr15	+,+,-	ARHGAP11A,ARHGAP11A,LOC100288615	-3097,-3097,-84794
chr9:99211415-99212175	chr9	+	99211468	99212130	True	NM_153695,NM_014282	chr9,chr9	-,+	ZNF367,HABP4	-30799,283
chr5:153857949-153858583	chr5	+	153858107	153858600	True	NM_004821,NR_024084	chr5,chr5	-,+	HAND1,SAP30L	-283,-32641
chr2:97649797-97650809	chr2	+	97650008	97650845	True	NM_001122646,NM_001164315	chr2,chr2	-,+	FAM178B,ANKRD36	1507,128387
chr22:39929615-39929877	chr22	+	39929814	39929918	True	NM_182810,NM_194326	chr22,chr22	+,-	ATF4,RPS19BP1	-13296,-954
chr10:76819447-76819772	chr10	+	76819452	76819642	True	NM_001003892,NM_001174156	chr10,chr10	-,+	DUPD1,SAMD8	-1180,51750
chr1:1260972-1261270	chr1	+	1261033	1261163	True	NM_001029885,NM_152228,NM_017871	chr1,chr1,chr1	+,+,-	GLTPD1,TAS1R3,CPSF3L	-941,5562,-987
chr4:2937215-2938278	chr4	+	2937351	2938287	True	NR_015453,NM_001120,NM_001146069	chr4,chr4,chr4	+,-,-	C4orf10,MFSD10,MFSD10	-124,-1387,-765
chr10:30998229-30999749	chr10	+	30998419	30999417	True	NM_183058,NM_005204	chr10,chr10	-,+	LYZL2,MAP3K8	-79772,-275604
chr3:52723890-52724369	chr3	+	52724000	52724271	True	NR_003047,NM_018313,NR_003687,NM_014366,NR_003057,NM_206825,NM_206826	chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,-,+,+,+,+,+	SNORD19,PBRM1,SNORD19B,GNL3,SNORD69,GNL3,GNL3	-796,-4134,482,-4116,2480,-4116,-4116
chr10:7710892-7711826	chr10	+	7710941	7711795	True	NM_002216,NM_001001851,NM_030569	chr10,chr10,chr10	+,-,-	ITIH2,ITIH5,ITIH5	33440,-1980,-1980
chr9:125875713-125876573	chr9	+	125875835	125876611	True	NR_030331,NM_005294,NR_026677	chr9,chr9,chr9	-,+,-	MIR600,GPR21,NCRNA00287	-1913,-79040,1195
chr11:66026517-66027938	chr11	+	66026601	66027937	True	NM_001134776,NM_001134775,NM_001134774,NM_022822,NM_020470,NM_030981	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,-,+	KLC2,KLC2,KLC2,KLC2,YIF1A,RAB1B	-1562,-1888,-1479,-1479,28751,8118
chr12:109830906-109831707	chr12	+	109830909	109831693	True	NM_213596,NM_001101421,NM_031954	chr12,chr12,chr12	-,+,-	FOXN4,MYO1H,KCTD10	-83884,-4436,83512
chr12:49488219-49488465	chr12	+	49488284	49488376	True	NM_021044,NM_005430	chr12,chr12	-,+	DHH,WNT1	276,-116099
chr8:100026639-100027535	chr8	+	100026706	100027345	True	NM_015243,NM_152564,NM_006281,NM_017890,NM_181661	chr8,chr8,chr8,chr8,chr8	+,+,-,+,+	VPS13B,VPS13B,STK3,VPS13B,VPS13B	-1274,-1274,-188797,-1274,-1274
chr8:56986889-56987108	chr8	+	56986926	56987124	True	NM_001011667,NM_001146227,NR_002437,NM_001023	chr8,chr8,chr8,chr8	+,-,-,-	CHCHD7,RPS20,SNORD54,RPS20	137190,66,-466,66
chr3:13006841-13007185	chr3	+	13006967	13007215	True	NM_014869,NM_012298	chr3,chr3	-,+	IQSEC1,CAND2	1795,-168847
chr19:51606516-51606724	chr19	+	51606516	51606602	True	NM_145232,NM_014441	chr19,chr19	-,+	CTU1,SIGLEC9	5101,21534
chr10:117030965-117031385	chr10	+	117031165	117031361	True	NM_207303,NM_001003408	chr10,chr10	+,-	ATRNL1,ABLIM1	-178099,-586751
chr3:99980221-99981423	chr3	+	99980350	99981124	True	NM_018309,NM_014820,NM_001199198	chr3,chr3,chr3	+,-,+	TBC1D23,TOMM70A,TBC1D23	-715,139151,-715
chr7:97501836-97503318	chr7	+	97501889	97503153	True	NM_133436,NM_183356,NM_001178076,NM_001178077,NM_001178075,NM_001673,NM_013998	chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,-,+	ASNS,ASNS,ASNS,ASNS,ASNS,ASNS,TAC1	-412,-35,-35,-412,-35,-35,-140669
chr21:42522077-42523599	chr21	+	42522188	42523620	True	NR_024100,NR_036167	chr21,chr21	-,+	C21orf130,MIR3197	-2197,15863
chr8:37621062-37621711	chr8	+	37621219	37621539	True	NR_003671,NM_007198	chr8,chr8	-,+	LOC728024,PROSC	-15655,-1169
chr22:38218435-38219334	chr22	+	38218714	38219254	True	NM_138797,NM_003614	chr22,chr22	-,+	ANKRD54,GALR3	21149,134
chr6:134499249-134499456	chr6	+	134499251	134499448	True	NM_004865,NM_001143678,NM_005627,NM_001143677	chr6,chr6,chr6,chr6	+,-,-,-	TBPL1,SGK1,SGK1,SGK1	-225001,-2181,-3217,-241
chr16:67514024-67514782	chr16	+	67514233	67514678	True	NM_004691,NM_001138,NM_024519	chr16,chr16,chr16	-,-,+	ATP6V0D1,AGRP,FAM65A	461,3088,48038
chr1:156558113-156558367	chr1	+	156558233	156558295	True	NM_144772,NM_001105669,NM_015590	chr1,chr1,chr1	+,+,-	APOA1BP,TTC24,GPATCH4	3262,-8765,13034
chrX:30234969-30236762	chrX	+	30235232	30236663	True	NM_000475,NM_002364	chrX,chrX	-,+	NR0B1,MAGEB2	90883,-1610
chr2:201728499-201728909	chr2	+	201728605	201728783	True	NR_027856,NM_001162407,NR_027855,NM_001136039,NM_004071	chr2,chr2,chr2,chr2,chr2	-,-,-,+,-	CLK1,CLK1,CLK1,NIF3L1,CLK1	734,551,734,25266,734
chr20:52790983-52792623	chr20	+	52791204	52792484	True	NM_002623,NM_001128915,NM_000782	chr20,chr20,chr20	+,-,-	PFDN4,CYP24A1,CYP24A1	32017,-688,-688
chr2:166644709-166645372	chr2	+	166645063	166645389	True	NM_004482,NM_024969	chr2,chr2	-,+	GALNT3,CSRNP3	5464,-216268
chr10:125648430-125648771	chr10	+	125648516	125648790	True	NM_198148,NM_153442	chr10,chr10	-,+	CPXM2,GPR26	2760,-222696
chr1:150267709-150268664	chr1	+	150267778	150268711	True	NM_018997,NM_016022,NM_031901	chr1,chr1,chr1	+,-,+	MRPS21,APH1A,MRPS21	-1560,-26246,-1560
chr4:104642000-104642325	chr4	+	104642025	104642369	True	NM_001008388,NM_001059	chr4,chr4	+,-	CISD2,TACR3	-851941,-1052
chr15:63569114-63569354	chr15	+	63569133	63569387	True	NM_001218,NM_031301,NM_001145646	chr15,chr15,chr15	-,+,+	CA12,APH1B,APH1B	104738,361,361
chr7:124405603-124405863	chr7	+	124405629	124405885	True	NM_005302,NM_001174046	chr7,chr7	-,+	GPR37,SPAM1	52,-839771
chr6:34102164-34102678	chr6	+	34102206	34102674	True	NM_002131,NM_000841	chr6,chr6	+,-	HMGA1,GRM4	101902,-763
chr21:47878173-47878472	chr21	+	47878304	47878432	True	NM_206889,NM_001146114,NM_001146115,NM_001146116,NM_206890,NM_206891,NM_015151,NM_058180	chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21	+,+,+,+,+,+,+,-	DIP2A,DIP2A,DIP2A,DIP2A,DIP2A,DIP2A,DIP2A,C21orf58	429,429,429,429,429,429,429,-134519
chr6:15065118-15065855	chr6	+	15065349	15065844	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	180682,597496
chr11:59521720-59522585	chr11	+	59521725	59522522	True	NM_004177,NM_001005324,NM_001178040	chr11,chr11,chr11	+,-,+	STX3,OR10V1,STX3	9,-40407,9
chr8:109797357-109799165	chr8	+	109797381	109799199	True	NM_153015,NM_003301	chr8,chr8	-,+	TMEM74,TRHR	621,300476
chr15:65478594-65479286	chr15	+	65478897	65479132	True	NM_001101362,NM_006660	chr15,chr15	+,-	KBTBD13,CLPX	-109794,-1334
chr1:99729433-99730057	chr1	+	99729439	99729811	True	NM_014839,NM_001037317,NM_001166252	chr1,chr1,chr1	+,-,+	LPPR4,LPPR5,LPPR4	36,-258990,36
chrY:14531652-14532301	chrY	+	14531685	14532235	True	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	242062,1204
chr6:80365714-80367424	chr6	+	80365964	80367257	True	NM_031469,NM_181714	chr6,chr6	+,-	SH3BGRL2,LCA5	-25015,-118817
chr16:28984703-28985426	chr16	+	28984896	28985368	True	NM_024816,NM_001142448,NM_001142449,NM_001142451,NM_001142450,NM_032038	chr16,chr16,chr16,chr16,chr16,chr16	-,+,+,+,+,+	RABEP2,SPNS1,SPNS1,SPNS1,SPNS1,SPNS1	-48364,727,727,727,727,727
chr20:61641767-61642199	chr20	+	61641845	61642077	True	NM_080606,NR_033370	chr20,chr20	-,+	BHLHE23,LOC63930	-3458,-1161
chr1:6578474-6578994	chr1	+	6578654	6578914	True	NM_198681,NM_138697	chr1,chr1	-,+	PLEKHG5,TAS1R1	1205,36423
chr19:850871-851127	chr19	+	850873	851043	True	NM_001972,NM_001928,NM_002777,NM_024888	chr19,chr19,chr19,chr19	+,+,+,-	ELANE,CFD,PRTN3,LPPR3	1247,8621,-9939,-28921
chr17:73666324-73667382	chr17	+	73666430	73667420	True	NM_001003716,NM_001003715,NM_004259,NM_013260	chr17,chr17,chr17,chr17	-,-,-,+	RECQL5,RECQL5,RECQL5,SAP30BP	-3161,-3161,-3165,-3089
chr1:117603215-117603437	chr1	+	117603280	117603476	True	NM_003594,NM_001145635	chr1,chr1	+,-	TTF2,TRIM45	-382,60985
chr9:114425671-114426412	chr9	+	114425686	114426088	True	NM_001017998,NR_034087,NM_001198664	chr9,chr9,chr9	+,-,+	GNG10,C9orf29,GNG10	-1886,-49853,-1886
chr9:131088112-131088880	chr9	+	131088124	131088728	True	NM_016035,NM_015679	chr9,chr9	+,-	COQ4,TRUB2	-3384,-3427
chr1:223567265-223567485	chr1	+	223567314	223567498	True	NM_152610,NM_001037175	chr1,chr1	+,-	C1orf65,SUSD4	-650,-29770
chr10:112068862-112069384	chr10	+	112068909	112069399	True	NM_005962,NM_005871	chr10,chr10	+,-	MXI1,SMNDC1	-83204,-4202
chr20:55201624-55201837	chr20	+	55201624	55201776	True	NM_080615,NM_003222	chr20,chr20	-,+	GCNT7,TFAP2C	-100643,2581
chr6:31781745-31782120	chr6_qbl_hap6	+	3075398	3075556	False	NM_005345,NM_005527,NM_021177	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	+,-,-	HSPA1A,HSPA1L,LSM2	1381,976,-7018
chr6:31781745-31782120	chr6_dbb_hap3	+	3067337	3067495	False	NM_005345,NM_005527,NM_021177	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	+,-,-	HSPA1A,HSPA1L,LSM2	1382,977,-7011
chr6:31781745-31782120	chr6	+	31781750	31781908	True	NM_005345,NM_005527,NM_021177	chr6,chr6,chr6	+,-,-	HSPA1A,HSPA1L,LSM2	1382,977,-7007
chr6:31781745-31782120	chr6_apd_hap1	+	3096511	3096669	False	NM_005345,NM_005527,NM_021177	chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1	+,-,-	HSPA1A,HSPA1L,LSM2	1382,977,-7017
chr6:31781745-31782120	chr6_cox_hap2	+	3291331	3291489	False	NM_005345,NM_005527,NM_021177	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,-,-	HSPA1A,HSPA1L,LSM2	1381,976,-7017
chr1:161123499-161123826	chr1	+	161123521	161123843	True	NM_032998,NM_012475,NM_001014443,NM_016406	chr1,chr1,chr1,chr1	-,+,+,+	DEDD,USP21,USP21,UFC1	-21043,5410,5410,-38
chr14:23056735-23057457	chr14	+	23057022	23057490	True	NM_022060,NM_001344	chr14,chr14	+,-	ABHD4,DAD1	9656,707
chr10:135378962-135379173	chr10	+	135378971	135379217	True	NM_130784,NR_033789,NM_001143763,NM_001143764,NM_000773	chr10,chr10,chr10,chr10,chr10	-,-,-,-,+	SYCE1,SPRNP1,SYCE1,SYCE1,CYP2E1	3709,4295,15,15,-38155
chr17:79678582-79678783	chr17	+	79678581	79678659	True	NM_001040025,NM_002949,NM_012140	chr17,chr17,chr17	-,+,+	ARL16,MRPL12,SLC25A10	-27627,-8232,711
chr1:48261229-48261687	chr1	+	48261241	48261731	True	NM_001194986,NM_004474	chr1,chr1	-,+	LOC388630,FOXD2	200881,-359611
chr5:112769759-112770131	chr5	+	112769828	112770116	True	NM_032028,NM_022828	chr5,chr5	-,+	TSSK1B,YTHDC2	662,79274
chr6:47625639-47626032	chr6	+	47625801	47626047	True	NM_153839,NM_014452	chr6,chr6	+,-	GPR111,TNFRSF21	-1534,-348121
chr8:22853635-22854269	chr8	+	22853803	22854287	True	NM_015178,NM_001160037,NM_001160036,NM_144962	chr8,chr8,chr8,chr8	+,+,+,-	RHOBTB2,RHOBTB2,RHOBTB2,PEBP4	2804,-493,-8924,-68382
chr2:45838860-45840185	chr2	+	45838945	45840229	True	NM_018079,NM_005400	chr2,chr2	-,+	SRBD1,PRKCE	-512,38813
chr11:107457343-107458760	chr11	+	107457377	107458731	True	NM_138775,NM_001130037,NM_018712,NR_028328	chr11,chr11,chr11,chr11	-,+,+,+	ALKBH8,ELMOD1,ELMOD1,LOC643923	-20916,3085,3085,3739
chr19:4539781-4540331	chr19	+	4539830	4540377	True	NM_052972,NM_032631,NM_001013706	chr19,chr19,chr19	-,+,-	LRG1,HDGFRP2,PLIN5	46,-67626,-4622
chr17:17589433-17589933	chr17	+	17589435	17589889	True	NM_030665,NR_024007	chr17,chr17	+,-	RAI1,SMCR5	-4699,93004
chr2:198700611-198700974	chr2	+	198700611	198700702	True	NM_006226,NM_197970	chr2,chr2	+,-	PLCL1,BOLL	-31247,-49673
chrY:180055-180802	chrY	+	180145	180597	True	NM_018390,NM_012227	chrY,chrY	+,-	PLCXD1,GTPBP6	-32136,340
chrY:180055-180802	chrX	+	230145	230597	False	NM_018390,NM_012227	chrX,chrX	+,-	PLCXD1,GTPBP6	-32136,340
chr22:50622756-50623094	chr22	+	50622797	50623009	True	NM_025204,NM_020461	chr22,chr22	+,-	TRABD,TUBGCP6	1350,60441
chr19:52148840-52149264	chr19	+	52148882	52149098	True	NR_029843,NM_001098612	chr19,chr19	+,-	MIR99B,SIGLEC14	46766,1084
chr17:79357342-79357946	chr17	+	79357467	79357755	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	15784,-52993
chr21:46491818-46492206	chr21	+	46491876	46492132	True	NM_001112,NM_001160230,NR_027292,NM_015834,NR_027674,NR_027672,NR_027673,NM_015833	chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21	+,+,-,+,+,+,+,+	ADARB1,ADARB1,C21orf122,ADARB1,ADARB1,ADARB1,ADARB1,ADARB1	2360,2360,1044,2360,2360,2360,2360,2360
chr8:39680579-39681656	chr8	+	39680652	39681356	True	NM_001464,NM_002164	chr8,chr8	-,+	ADAM2,IDO1	14483,89971
chr12:13222504-13223284	chr12	+	13222730	13223298	True	NM_031289,NM_020853	chr12,chr12	-,+	GSG1,KIAA1467	25461,-25467
chr16:327500-328157	chr16	+	327922	327991	True	NM_006849,NM_183337,NM_001176,NM_003834	chr16,chr16,chr16,chr16	+,-,+,-	PDIA2,RGS11,ARHGDIG,RGS11	5126,-2008,2614,-2008
chr2:53995367-53996373	chr2	+	53995374	53996218	True	NM_001201965,NM_001008708	chr2,chr2	-,+	ASB3,CHAC2	17817,-496
chr15:23125146-23126549	chr15	+	23125349	23126190	True	NM_001142275,NR_024074	chr15,chr15	-,+	NIPA1,GOLGA8IP	-38506,129051
chr15:23125146-23126549	chr15	-	29067303	29067353	False	NR_033351,NR_037599	chr15,chr15	-,+	GOLGA8F,LOC646278	-289160,-32374
chr7:102070809-102072044	chr7	+	102071302	102072046	True	NM_017621,NM_032831,NM_001126340	chr7,chr7,chr7	-,+,+	ALKBH4,ORAI2,ORAI2	33325,1949,1949
chr5:779432-780227	chr5	+	779716	780210	True	NM_001166260,NM_024786	chr5,chr5	+,-	TRIP13,ZDHHC11	112758,70943
chr5:779432-780227	chr5	+	687653	688147	False	NM_018140,NM_007030	chr5,chr5	+,-	CEP72,TPPP	-75299,5415
chr15:80350337-80351520	chr15	+	80350452	80351516	True	NM_004049,NM_019006	chr15,chr15	-,+	BCL2A1,ZFAND6	-86809,504
chr9:140445307-140445626	chr9	+	140445530	140445674	True	NM_032477,NM_152286,NM_001098537	chr9,chr9,chr9	+,-,-	MRPL41,PNPLA7,PNPLA7	634,-544,-544
chr19:54060582-54060936	chr19	+	54060655	54060939	True	NM_001079907,NR_002938	chr19,chr19	+,-	ZNF331,LOC284379	-2147,45862
chr9:19230344-19230624	chr9	+	19230497	19230627	True	NR_038064,NM_017925	chr9,chr9	-,+	PLIN2,DENND4C	-102893,60121
chr2:24152505-24152917	chr2	+	24152600	24152756	True	NM_181713,NM_017552	chr2,chr2	+,-	UBXN2A,ATAD2B	10619,-2666
chr8:145204025-145204552	chr8	+	145204036	145204296	True	NM_030974,NM_032450,NM_001099281,NM_001099280	chr8,chr8,chr8,chr8	-,+,+,+	SHARPIN,HEATR7A,HEATR7A,HEATR7A	-44896,-1168,-1168,-1168
chr8:145204025-145204552	chr8	+	145449244	145449504	False	NM_016458,NM_015201	chr8,chr8	+,-	FAM203A,BOP1	-11415,65666
chr1:92356022-92356977	chr1	+	92356359	92356449	True	NM_207189,NM_003243,NR_036634,NM_001195683	chr1,chr1,chr1,chr1	+,-,-,-	BRDT,TGFBR3,TGFBR3,TGFBR3	58478,-4523,-4523,-4523
chr11:45944930-45945157	chr11	+	45945050	45945136	True	NM_152312,NM_004813,NM_057174	chr11,chr11,chr11	+,-,-	GYLTL1B,PEX16,PEX16	-1905,-5376,-5376
chr6:168720639-168720950	chr6	+	168720651	168720825	True	NM_214462,NM_001166412	chr6,chr6	-,+	DACT2,SMOC2	-249,121005
chr12:9105081-9106098	chr12	+	9105405	9105925	True	NM_002355,NM_005810	chr12,chr12	-,+	M6PR,KLRG1	-3153,36295
chr8:126445746-126446951	chr8	+	126445882	126446940	True	NM_014846,NM_025195	chr8,chr8	-,+	KIAA0196,TRIB1	-341821,-3370
chr2:27440753-27441261	chr2	+	27440797	27441225	True	NM_021095,NM_001170795,NM_004341,NR_028323,NM_016085,NM_080592	chr2,chr2,chr2,chr2,chr2,chr2	-,+,+,-,+,+	SLC5A6,C2orf28,CAD,SLC5A6,C2orf28,C2orf28	-5622,-5629,-590,-5622,-5629,-5949
chr14:21861785-21863135	chr14	+	21862037	21863104	True	NR_002916,NM_014828,NR_003029,NM_007192	chr14,chr14,chr14,chr14	-,+,-,-	SNORD8,TOX4,SNORD9,SUPT16H	2506,82230,-1625,-9612
chr2:130983958-130985674	chr2	+	130984151	130985671	True	NM_025029,NM_207312	chr2,chr2	+,-	MZT2B,TUBA3E	-44709,-28117
chr2:130983958-130985674	chr2	-	132205209	132205267	False	NR_002826,NM_080386	chr2,chr2	-,+	LOC401010,TUBA3D	-2742,28398
chr16:70333672-70334563	chr16	+	70333688	70333986	True	NM_001014451,NM_001605,NM_007242,NM_001014449	chr16,chr16,chr16,chr16	+,-,+,+	DDX19B,AARS,DDX19B,DDX19B	-667,-10276,-667,-667
chr7:150727998-150728280	chr7	+	150728117	150728299	True	NM_173681,NM_007188	chr7,chr7	-,+	ATG9B,ABCB8	-6531,-2669
chr7:150549830-150550964	chr7	+	150550038	150550415	True	NM_001091,NM_014020	chr7,chr7	+,-	ABP1,TMEM176B	-516,-51590
chr14:55907655-55908826	chr14	+	55907860	55908840	True	NM_004986,NM_199047	chr14,chr14	+,-	KTN1,TBPL2	138084,-597
chr4:170925266-170926117	chr4	+	170925501	170926068	True	NM_001009554,NM_173872	chr4,chr4	-,+	MFAP3L,CLCN3	-566,-383835
chr4:4291556-4291792	chr4	+	4291563	4291675	True	NM_017816,NM_145291,NM_001145725	chr4,chr4,chr4	-,+,-	LYAR,ZBTB49,LYAR	271,248,123
chr11:18039489-18039933	chr11	+	18039750	18039940	True	NM_012139,NM_054031	chr11,chr11	-,+	SERGEF,MRGPRX3	-5113,102561
chr12:53011013-53012003	chr12	+	53011035	53011889	True	NM_002284,NM_175068	chr12,chr12	+,-	KRT86,KRT73	-315437,504
chr1:51863816-51865332	chr1	+	51864178	51864940	True	NM_014372,NM_001159969	chr1,chr1	+,-	RNF11,EPS15	-162285,22912
chr5:175976560-175977020	chr5	+	175976570	175976952	True	NM_014901,NM_017675,NM_001171976	chr5,chr5,chr5	-,+,+	RNF44,CDHR2,CDHR2	-12149,-278,-7109
chr9:112541207-112542191	chr9	+	112541429	112542015	True	NM_053016,NM_007203,NM_002829,NM_147150	chr9,chr9,chr9,chr9	+,+,-,+	PALM2,PALM2-AKAP2,PTPN3,PALM2-AKAP2	561,561,-280836,561
chr3:71631040-71631290	chr3	+	71631145	71631208	True	NM_018971,NM_001012505,NM_032682	chr3,chr3,chr3	+,-,-	GPR27,FOXP1,FOXP1	171992,1983,1983
chr22:32667556-32668150	chr22	+	32667572	32668116	True	NM_014227,NM_006604	chr22,chr22	-,+	SLC5A4,RFPL3	-16254,82755
chr1:151371193-151371435	chr1	+	151371211	151371443	True	NM_003944,NM_002796	chr1,chr1	-,+	SELENBP1,PSMB4	-26047,597
chrX:39726078-39726505	chrX	+	39726204	39726376	True	NM_005765,NM_001123385	chrX,chrX	+,-	ATP6AP2,BCOR	713839,230393
chr16:69170289-69170546	chr16	+	69170341	69170600	True	NM_001039690,NR_033227,NM_001040146,NM_032830	chr16,chr16,chr16,chr16	-,-,-,+	CHTF8,CHTF8,CHTF8,CIRH1A	-3848,-3848,-4279,-3895
chr5:175511119-175512819	chr5	+	175511517	175512004	True	NR_036494,NM_001079529	chr5,chr5	-,+	LOC643201,FAM153B	114345,39
chr5:175511119-175512819	chr5	-	177180205	177180655	False	NR_003615,NM_173663	chr5,chr5	+,-	LOC728554,FAM153A	121606,26900
chr5:175511119-175512819	chr5	+	177457145	177457632	False	NM_006261,NM_001079527	chr5,chr5	-,+	PROP1,FAM153C	-33902,-21507
chr7:127977251-127977912	chr7	+	127977250	127977961	True	NM_000230,NM_001166135,NM_018077	chr7,chr7,chr7	+,-,-	LEP,RBM28,RBM28	-95970,6059,6059
chrX:152222872-152223186	chrX	+	152222872	152223202	True	NM_032882,NM_013364	chrX,chrX	-,+	PNMA6A,PNMA3	22806,1563
chr6:90530479-90531420	chr6	+	90530482	90530670	True	NM_001137667,NM_001137668,NM_014611,NM_012115	chr6,chr6,chr6,chr6	+,+,-,+	CASP8AP2,CASP8AP2,MDN1,CASP8AP2	8948,8948,-1040,8948
chr22:24577221-24577541	chr22	+	24577236	24577504	True	NM_001099781,NM_019601	chr22,chr22	-,+	GGT5,SUSD2	63656,-19
chr14:98657272-98659181	chr14	+	98657273	98658935	True	NR_015430,NM_182560	chr14,chr14	-,+	C14orf64,C14orf177	-212812,519014
chr17:38657932-38658874	chr17	+	38658111	38658905	True	NM_032865,NM_001552	chr17,chr17	-,+	TNS4,IGFBP4	-257,-58486
chrX:40505491-40505768	chrX	+	40505611	40505779	True	NM_144970,NM_001195522	chrX,chrX	-,+	CXorf38,LOC347411	1090,-22845
chr22:32747543-32748666	chr22	+	32747743	32748518	True	NM_006604,NR_001450,NM_001098535	chr22,chr22,chr22	+,-,+	RFPL3,RFPL3S,RFPL3	2353,18504,5335
chr3:19984825-19986065	chr3	+	19984954	19986097	True	NM_144715,NM_004162	chr3,chr3	-,+	EFHB,RAB5A	-9248,2474
chr1:13912923-13914268	chr1	+	13912929	13914250	True	NM_006474,NM_001010847,NM_001006625,NM_001006624,NM_198389	chr1,chr1,chr1,chr1,chr1	+,-,+,+,+	PDPN,LRRC38,PDPN,PDPN,PDPN	-2728,-72687,-1013,-1013,-2728
chr2:135785845-135786662	chr2	+	135786158	135786613	True	NM_001018046,NM_025052,NM_001172435	chr2,chr2,chr2	-,-,+	YSK4,YSK4,RAB3GAP1	-3910,-3910,23221
chr1:154126129-154126569	chr1	+	154126255	154126585	True	NM_001159484,NM_207308,NM_001127320	chr1,chr1,chr1	-,-,+	NUP210L,NUP210L,UBAP2L	1057,1057,66069
chr8:32449619-32450862	chr8	+	32449743	32450748	True	NM_001159999,NM_001159995,NM_032664,NM_001160001	chr8,chr8,chr8,chr8	+,+,-,+	NRG1,NRG1,FUT10,NRG1	2595,2595,879970,2595
chr1:15783822-15785816	chr1	+	15784259	15785041	True	NM_033440,NM_001229	chr1,chr1	+,-	CELA2A,CASP9	-1096,65949
chr22:41940853-41941083	chr22	+	41940925	41941095	True	NM_001018050,NM_001018052,NM_014460,NM_138338	chr22,chr22,chr22,chr22	-,-,+,-	POLR3H,POLR3H,CSDC2,POLR3H	-446,-446,15918,-449
chr11:74659629-74659868	chr11	+	74659634	74659888	True	NM_014752,NM_182969	chr11,chr11	+,-	SPCS2,XRRA1	403,394
chr4:20824587-20826157	chr4	+	20824618	20825796	True	NM_147181,NM_145048	chr4,chr4	-,+	KCNIP4,PACRGL	26553,-122633
chr1:52341145-52341388	chr1	+	52341147	52341237	True	NM_001101662,NM_148907,NM_002525	chr1,chr1,chr1	-,+,-	NRD1,OSBPL9,NRD1	3426,-145722,3426
chrX:151618071-151618940	chrX	+	151618081	151618923	True	NM_000808,NM_018558	chrX,chrX	-,+	GABRA3,GABRQ	958,187713
chr2:228493790-228495050	chr2	+	228493975	228495066	True	NM_020161,NM_004504,NM_001162483	chr2,chr2,chr2	-,+,-	C2orf83,AGFG1,C2orf83	3030,-157138,3030
chr19:23857299-23857696	chr19	+	23857430	23857504	True	NM_138330,NR_003662	chr19,chr19	-,+	ZNF675,RPSAP58	12567,88311
chr16:33729002-33729467	chr16	+	33729256	33729514	True	NR_033866,NM_001205265	chr16,chr16	-,+	LOC390705,TP53TG3B	-430554,-467187
chr16:33729002-33729467	chr16	-	32938101	32938359	False	NR_003083,NM_016212	chr16,chr16	-,+	SLC6A10P,TP53TG3	-41638,266620
chr17:16875089-16875316	chr17	+	16875088	16875360	True	NM_015134,NM_012452	chr17,chr17	+,-	MPRIP,TNFRSF13B	70746,92
chr9:139269985-139270349	chr9	+	139269992	139270398	True	NM_052813,NM_001200003,NM_052814	chr9,chr9,chr9	-,+,-	CARD9,GPSM1,CARD9	-1859,-20791,-1859
chrX:103318803-103320267	chrX	+	103319192	103320148	True	NR_003238,NM_001164416	chrX,chrX	-,+	H2BFXP,H2BFM	-1690,-24737
chrX:103318803-103320267	chrX	-	103227853	103228809	False	NR_003238,NM_001002916	chrX,chrX	+,-	H2BFXP,H2BFWT	1692,39507
chr7:134211229-134211437	chr7	+	134211297	134211467	True	NM_001628,NM_020299	chr7,chr7	-,+	AKR1B1,AKR1B10	-67409,876
chr7:134211229-134211437	chr7	+	134246442	134246492	False	NM_001628,NM_001080538	chr7,chr7	-,+	AKR1B1,AKR1B15	-102554,-12644
chr2:198364852-198365095	chr2	+	198364875	198365141	True	NM_002157,NM_002156,NM_001202485,NM_199440	chr2,chr2,chr2,chr2	+,-,+,-	HSPE1,HSPD1,HSPE1-MOBKL3,HSPD1	-205,-235,-205,77
chr19:5902994-5903607	chr19	+	5903076	5903552	True	NR_034166,NM_175614,NM_001017921,NM_001193375	chr19,chr19,chr19,chr19	-,-,+,-	NDUFA11,NDUFA11,VMAC,NDUFA11	522,522,1299,522
chr16:15952619-15953081	chr16	+	15952688	15953098	True	NM_002474,NM_001040113,NM_004996,NM_001040114,NM_022844	chr16,chr16,chr16,chr16,chr16	-,-,+,-,-	MYH11,MYH11,ABCC1,MYH11,MYH11	-1801,-1801,90335,-1801,-1801
chr16:68018328-68019100	chr16	+	68018770	68019100	True	NM_022357,NM_001129758,NM_017803	chr16,chr16,chr16	-,-,+	DPEP3,DPEP3,DUS2L	-4318,-4318,38103
chr22:24409941-24411572	chr22	+	24409981	24411332	True	NR_003082,NM_012295,NM_001199281,NM_001201429	chr22,chr22,chr22,chr22	-,+,+,+	GSTTP2,CABIN1,CABIN1,CABIN1	-8082,-2274,-2219,-2274
chr20:43537044-43538397	chr20	+	43537336	43538320	True	NM_006809,NM_001124756	chr20,chr20	-,+	TOMM34,PABPC1L	50844,382
chr11:59835447-59835871	chr11	+	59835558	59835694	True	NM_006138,NM_152851	chr11,chr11	+,-	MS4A3,MS4A6A	-11518,115036
chr11:2193549-2193927	chr11	+	2193652	2193882	True	NM_199293,NM_199292,NR_028044,NM_000360	chr11,chr11,chr11,chr11	-,-,+,-	TH,TH,IGF2AS,TH	-617,-617,-31945,-617
chr17:7791489-7793219	chr17	+	7791626	7793126	True	NM_005852,NM_001005273,NR_024349,NM_001005271	chr17,chr17,chr17,chr17	+,+,-,+	CHD3,CHD3,LOC284023,CHD3	8,8,26189,-3554
chr11:111384749-111385409	chr11	+	111384888	111385338	True	NM_001100388,NM_017589,NM_207430,NR_029839,NR_029840	chr11,chr11,chr11,chr11,chr11	+,-,+,+,+	C11orf88,BTG4,C11orf88,MIR34B,MIR34C	171,-1824,171,-1284,-783
chr9:42204288-42205565	chr9	+	42205092	42205173	True	NR_003670,NM_001012421	chr9,chr9	-,+	KGFLP2,ANKRD20A2	-185508,163129
chr9:42204288-42205565	chr9	+	70599920	70600001	False	NM_201453	chr9	-	CBWD3	-109743
chr9:42204288-42205565	chr9	-	45488370	45488435	False	NM_001145196,NR_024060	chr9,chr9	-,+	FAM75A6,FAM27A	-1857640,238593
chr9:42204288-42205565	chr9	-	45874610	45874691	False	NM_001145196,NR_024060	chr9,chr9	-,+	FAM75A6,FAM27A	-2243880,-147639
chr9:27294741-27295551	chr9	+	27294742	27295475	True	NM_001161585,NM_020641,NM_000459	chr9,chr9,chr9	-,-,+	C9orf11,C9orf11,TEK	1721,1721,-185646
chr20:31990858-31991559	chr20	+	31991181	31991247	True	NM_016408,NM_001032999,NM_016082	chr20,chr20,chr20	-,+,-	CDK5RAP1,CBFA2T2,CDK5RAP1	-1844,86680,-1844
chr12:132852390-132852591	chr12	+	132852399	132852593	True	NM_001122636,NR_024563	chr12,chr12	-,+	GALNT9,LOC100130238	53362,-473
chr2:51259122-51259389	chr2	+	51259137	51259415	True	NM_001135659,NM_006872,NM_004801	chr2,chr2,chr2	-,+,-	NRXN1,GTF2A1L,NRXN1	309,-2414251,309
chr3:58196928-58197842	chr3	+	58196936	58197802	True	NM_020676,NM_004944	chr3,chr3	+,-	ABHD6,DNASE1L3	25456,2646
chr9:99411213-99411566	chr9	+	99411346	99411544	True	NR_026792,NM_153698	chr9,chr9	+,-	LOC441455,C9orf21	76558,6117
chr19:6767003-6767319	chr19	+	6767007	6767299	True	NM_005490,NM_005428	chr19,chr19	-,+	SH2D3A,VAV1	274,5422
chr20:632409-633021	chr20	+	632460	633048	True	NM_080725,NM_001042353	chr20,chr20	-,+	SRXN1,FAM110A	892,181307
chr3:71773047-71773838	chr3	+	71773055	71773778	True	NM_001134650,NM_001134651,NM_018971	chr3,chr3,chr3	-,-,+	EIF4E3,EIF4E3,GPR27	4541,798,29422
chr17:3498617-3498964	chr17	+	3498772	3499004	True	NM_080705,NM_080706,NM_018727,NM_001031681	chr17,chr17,chr17,chr17	-,-,-,+	TRPV1,TRPV1,TRPV1,CTNS	171,-2601,1382,40757
chr12:6546924-6547723	chr12	+	6547078	6547771	True	NM_001242,NR_015382	chr12,chr12	+,-	CD27,LOC678655	6279,12962
chr20:4722480-4723405	chr20	+	4722645	4723327	True	NR_024267,NR_024268,NR_024269,NM_012409	chr20,chr20,chr20,chr20	-,-,-,+	PRNT,PRNT,PRNT,PRND	-1331,-1331,-1331,-20140
chr10:5566122-5566323	chr10	+	5566194	5566312	True	NM_017422,NM_005185	chr10,chr10	-,+	CALML5,CALML3	-24661,611
chr20:60983936-60984966	chr20	+	60983973	60984966	True	NM_001024,NM_031215	chr20,chr20	+,-	RPS21,CABLES2	-21903,-1634
chr17:66285361-66285698	chr17	+	66285445	66285727	True	NM_004694,NM_001174166,NM_014960	chr17,chr17,chr17	-,-,+	SLC16A6,SLC16A6,ARSG	1728,1728,-30173
chr20:32272533-32273180	chr20	+	32272739	32272945	True	NM_005225,NM_001024675	chr20,chr20	-,+	E2F1,C20orf134	1315,-18486
chrX:37208804-37209108	chrX	+	37208825	37209153	True	NM_001173489,NM_001173486,NM_001173490,NM_001142395,NM_000950,NM_006520	chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,-	PRRG1,PRRG1,PRRG1,PRRG1,PRRG1,DYNLT3	-293,-348,-293,-348,-348,497786
chr19:54580104-54580370	chr19	+	54580149	54580313	True	NM_004542,NM_001135686	chr19,chr19	+,-	NDUFA3,TARM1	25846,4371
chr12:25348827-25349944	chr12	+	25348853	25349769	True	NM_001001660,NM_001204101,NM_001204102,NM_001082972,NM_001082973,NM_018272	chr12,chr12,chr12,chr12,chr12,chr12	+,-,-,-,-,-	LYRM5,CASC1,CASC1,CASC1,CASC1,CASC1	-755,-759,-759,-759,-759,-759
chr4:40059196-40060599	chr4	+	40059285	40060223	True	NR_027277,NM_018177	chr4,chr4	-,+	LOC344967,N4BP2	-466,-812
chr1:63959948-63961652	chr1	+	63960196	63961685	True	NM_032437,NM_014288	chr1,chr1	+,-	EFCAB7,ITGB3BP	27327,27200
chr12:113337865-113339864	chr12	+	113338263	113339373	True	NM_001032409,NM_002534,NM_001193521,NM_016816	chr12,chr12,chr12,chr12	+,+,-,+	OAS1,OAS1,RASAL1,OAS1	5365,5365,234236,5365
chr5:176053663-176054654	chr5	+	176053765	176054631	True	NM_001099408,NM_003085,NR_036239,NM_001001502	chr5,chr5,chr5,chr5	+,-,-,-	EIF4E1B,SNCB,MIR4281,SNCB	3051,2976,1920,2976
chr7:30029774-30030321	chr7	+	30029782	30030180	True	NM_001197026,NM_001145513,NM_001145515,NM_001145514,NM_014766	chr7,chr7,chr7,chr7,chr7	+,-,-,-,-	PLEKHA8,SCRN1,SCRN1,SCRN1,SCRN1	37796,-48,-357,-27,-357
chr21:44807430-44807801	chr21	+	44807599	44807715	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	62188,39337
chr5:169929700-169930113	chr5	+	169929787	169930051	True	NM_001034837,NM_004137,NM_014592	chr5,chr5,chr5	+,-,+	KCNIP1,KCNMB1,KCNIP1	996,-113149,996
chr19:530963-531306	chr19	+	531006	531264	True	NM_182577,NM_004359	chr19,chr19	-,+	ODF3L2,CDC34	-56023,468
chr1:175161495-175161845	chr1	+	175161500	175161798	True	NM_001162893,NM_022093,NM_014656,NM_001162895,NM_001162894	chr1,chr1,chr1,chr1,chr1	-,+,-,-,-	KIAA0040,TNN,KIAA0040,KIAA0040,KIAA0040	481,-124557,201,201,481
chr17:75882662-75882958	chr17	+	75882802	75882894	True	NM_001142640,NR_028337	chr17,chr17	+,-	TNRC6C,FLJ45079	117423,-2633
chr9:95181741-95183615	chr9	+	95181883	95183189	True	NM_005014,NM_001012267	chr9,chr9	-,+	OMD,CENPP	3697,-94193
chr1:200578643-200579492	chr1	+	200578790	200579293	True	NM_014875,NM_203459	chr1,chr1	-,+	KIF14,CAMSAP1L1	10630,129392
chr12:7919527-7920370	chr12	+	7919753	7920244	True	NM_203503,NM_001145465	chr12,chr12	-,+	CLEC4C,NANOGNB	-17684,-1992
chr1:1294218-1295075	chr1	+	1294733	1295095	True	NM_152228,NM_032348	chr1,chr1	+,-	TAS1R3,MXRA8	-28066,-818
chr1:247276628-247277921	chr1	+	247276779	247277677	True	NM_024804,NM_001142572,NM_207401,NM_173858	chr1,chr1,chr1,chr1	-,-,-,+	ZNF669,ZNF669,C1orf229,VN1R5	-9105,-9105,-1060,141696
chr2:61240879-61241676	chr2	+	61241102	61241688	True	NM_144709,NM_002618	chr2,chr2	-,+	PUS10,PEX13	3728,3123
chr17:79867011-79868314	chr17	+	79867187	79868116	True	NM_016538,NM_002861,NM_148896,NM_001184917,NR_033682,NR_033683,NR_033681,NR_033685	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,-,-,-,-,-	SIRT7,PCYT2,NPB,PCYT2,PCYT2,PCYT2,PCYT2,PCYT2	7992,1274,-7166,1274,1274,1011,1274,1011
chr1:39454801-39455726	chr1	+	39454894	39455750	True	NM_024595,NM_001136275,NM_017821	chr1,chr1,chr1	+,+,-	AKIRIN1,AKIRIN1,RHBDL2	1165,1165,-47438
chr16:58767747-58767957	chr16	+	58767751	58767817	True	NM_002080,NM_024860	chr16,chr16	-,+	GOT2,SETD6	479,-218419
chr4:76597157-76597804	chr4	+	76597177	76597735	True	NM_203505,NM_203504,NM_012297,NM_003715	chr4,chr4,chr4,chr4	-,-,-,+	G3BP2,G3BP2,G3BP2,USO1	982,982,658,52093
chr15:58006337-58008028	chr4	+	68905377	68905442	True	NR_015446,NR_027094	chr4,chr4	+,-	FTLP10,SYT14L	142567,23638
chr9:34635775-34636350	chr9	+	34636011	34636291	True	NM_147157,NM_005866,NM_000155,NM_001017363	chr9,chr9,chr9,chr9	-,-,+,-	SIGMAR1,SIGMAR1,GALT,ARID3C	1527,1527,10343,-8000
chr2:208635469-208635943	chr2	+	208635492	208635916	True	NM_152523,NM_003468	chr2,chr2	+,-	CCNYL1,FZD5	-59280,-1349
chr1:110028878-110029662	chr1	+	110028882	110029573	True	NM_020703,NM_153340,NM_001134403,NM_001134402,NM_182580,NM_001134404,NM_001134400	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,+,+,+,+	AMIGO1,ATXN7L2,CYB561D1,CYB561D1,CYB561D1,CYB561D1,CYB561D1	22814,-2372,7127,7084,7127,7127,7127
chr2:61245427-61246673	chr2	+	61245484	61246655	True	NM_144709,NM_002618	chr2,chr2	-,+	PUS10,PEX13	-119,-723
chr18:7569158-7571027	chr18	+	7569232	7570732	True	NM_005559,NM_002845,NM_001105244	chr18,chr18,chr18	-,+,+	LAMA1,PTPRM,PTPRM	-451419,-1969,-1969
chr8:33457227-33458379	chr8	+	33457348	33458431	True	NM_032509,NM_024025	chr8,chr8	+,-	MAK16,DUSP26	-114714,-69
chr4:109520064-109520267	chr4	+	109520189	109520281	True	NR_026968,NM_000995	chr4,chr4	-,+	LOC285456,RPL34	21390,21440
chr6:56830990-56832225	chr6	+	56831465	56832131	True	NM_152731,NM_183227	chr6,chr6	+,-	BEND6,RAB23	-11750,254176
chr22:32844896-32845762	chr22	+	32844975	32845602	True	NM_174932,NM_012179	chr22,chr22	-,+	BPIL2,FBXO7	7834,25104
chr9:95057656-95058268	chr9	+	95057655	95058303	True	NR_003704,NM_013417,NR_037424,NM_002161,NM_001012267	chr9,chr9,chr9,chr9,chr9	-,-,-,-,+	SNORA84,IARS,MIR3651,IARS,CENPP	-2780,-1683,-2826,-1617,29437
chr4:189020490-189021572	chr4	+	189020810	189021590	True	NM_173553,NM_178556	chr4,chr4	-,+	TRIML2,TRIML1	4868,39007
chr2:60961792-60962785	chr2	+	60962130	60962678	True	NM_022894,NR_033980	chr2,chr2	+,-	PAPOLG,FLJ16341	20686,145821
chr1:186361990-186362792	chr1	+	186362467	186362808	True	NM_001199906,NM_022375,NM_003292	chr1,chr1,chr1	+,+,-	OCLM,OCLM,TPR	6895,6895,-18010
chr19:20013436-20013636	chr19	+	20013436	20013553	True	NM_001145404,NM_031218	chr19,chr19	-,+	ZNF506,ZNF93	-80876,-1765
chr19:56091649-56091860	chr19	+	56091802	56091874	True	NM_153219,NM_152600	chr19,chr19	+,-	ZNF524,ZNF579	19855,387
chr11:47791219-47792089	chr11	+	47791248	47791312	True	NM_001164379,NM_015308	chr11,chr11	+,-	FAM180B,FNBP4	-183069,-2255
chr9:136396320-136396749	chr9	+	136396319	136396543	True	NM_014694,NM_001080483,NM_001145320	chr9,chr9,chr9	+,-,+	ADAMTSL2,TMEM8C,ADAMTSL2	3431,-6251,742
chr7:107531579-107531796	chr7	+	107531650	107531824	True	NM_000111,NM_000108	chr7,chr7	-,+	SLC26A3,DLD	-87972,-115
chr19:13888056-13888556	chr19	+	13888165	13888593	True	NR_036515,NM_014047	chr19,chr19	-,+	LOC284454,C19orf53	58560,-2959
chr1:110918792-110920542	chr1	+	110918794	110920290	True	NM_001201546,NM_022768	chr1,chr1	-,+	SLC16A4,RBM15	13470,-36900
chrX:19906760-19907270	chrX	+	19906783	19907229	True	NM_031892,NM_001173456	chrX,chrX	-,+	SH3KBP1,PDHA1	-1039,-544823
chr11:65157468-65157822	chr11	+	65157668	65157868	True	NM_031904,NM_182556,NM_001077241	chr11,chr11,chr11	+,-,-	FRMD8,SLC25A45,SLC25A45	-3678,-7526,-7526
chr16:57473148-57473500	chr16	+	57473176	57473482	True	NM_020313,NM_020312	chr16,chr16	-,+	CIAPIN1,COQ9	7937,7854
chr12:14134319-14134525	chr12	+	14134327	14134501	True	NM_000834,NM_018179	chr12,chr12	-,+	GRIN2B,ATF7IP	-1305,384109
chr12:133064680-133065153	chr12	+	133064923	133065169	True	NM_001142641,NM_001195520	chr12,chr12	+,-	FBRSL1,LOC645277	1987,121918
chr16:3031517-3031789	chr16	+	3031533	3031803	True	NR_033861,NM_004203,NM_182687	chr16,chr16,chr16	+,-,-	LOC283875,PKMYT1,PKMYT1	7251,-993,-993
chr17:80185333-80185950	chr17	+	80185413	80185809	True	NM_001042423,NM_001042422,NM_004207,NM_198082	chr17,chr17,chr17,chr17	+,+,+,-	SLC16A3,SLC16A3,SLC16A3,CCDC57	4334,483,1079,-14724
chr3:178268588-178268947	chr3	+	178268620	178268984	True	NM_022470,NM_005832	chr3,chr3	-,+	ZMAT3,KCNMB2	520722,7633
chr19:45348180-45348656	chr19	+	45348310	45348558	True	NM_001042724,NM_145288,NM_002856	chr19,chr19,chr19	+,-,+	PVRL2,ZNF296,PVRL2	834,231180,834
chr1:1937891-1939370	chr1	+	1938049	1939146	True	NM_000815,NM_001080484	chr1,chr1	+,-	GABRD,KIAA1751	11621,-2773
chr2:26257529-26257787	chr2	+	26257537	26257825	True	NM_002254,NM_016131	chr2,chr2	-,+	KIF3C,RAB10	-52094,-859
chr17:4612752-4613043	chr17	+	4612820	4613091	True	NM_004313,NM_199004,NM_014389	chr17,chr17,chr17	+,+,-	ARRB2,ARRB2,PELP1	697,697,-5188
chr6:42947959-42948839	chr6	+	42948457	42948538	True	NM_006245,NM_180976,NM_000287,NM_180977	chr6,chr6,chr6,chr6	+,+,-,+	PPP2R5D,PPP2R5D,PEX6,PPP2R5D	3791,3791,-1476,3791
chr11:63975065-63975506	chr11	+	63975082	63975469	True	NM_178443,NM_001160393,NM_031471	chr11,chr11,chr11	+,-,+	FERMT3,TRPT1,FERMT3	-981,17922,-981
chr4:21533293-21535091	chr4	+	21533580	21535108	True	NM_001035004,NM_145048	chr4,chr4	-,+	KCNIP4,PACRGL	11224,-831597
chr17:73519413-73519842	chr17	+	73519416	73519858	True	NM_001031803,NM_207346,NM_020753,NM_001015002,NM_004524	chr17,chr17,chr17,chr17,chr17	+,+,-,+,+	LLGL2,TSEN54,CASKIN2,LLGL2,LLGL2	1924,-6858,-7789,1924,1924
chr17:48421264-48421921	chr17	+	48421839	48421976	True	NM_016504,NM_022167	chr17,chr17	-,+	MRPL27,XYLT2	28643,1416
chr7:55756985-55758047	chr7	+	55757100	55757876	True	NM_182633,NR_027342,NR_027340,NR_027339	chr7,chr7,chr7,chr7	+,-,-,-	ZNF713,FKBP9L,FKBP9L,FKBP9L	222454,-106,-1375,53
chr7:55756985-55758047	chr7	-	33037469	33037849	False	NM_001166118,NM_007270	chr7,chr7	-,+	NT5C3,FKBP9	42722,-40515
chr3:100119734-100119945	chr3	+	100119753	100119931	True	NM_014820,NM_001085451	chr3,chr3	-,+	TOMM70A,LNP1	344,105
chr1:202310628-202311000	chr1	+	202310746	202310950	True	NM_014176,NM_001167858,NM_002481,NM_001167857	chr1,chr1,chr1,chr1	-,+,+,+	UBE2T,PPP1R12B,PPP1R12B,PPP1R12B	194,6879,6879,6879
chr11:74178031-74178277	chr11	+	74178038	74178268	True	NM_006591,NM_005472	chr11,chr11	+,-	POLD3,KCNE3	125360,382
chr1:202188426-202188651	chr1	+	202188456	202188672	True	NM_001017404,NR_037664	chr1,chr1	+,-	LGR6,PTPN7	-5224,-57740
chr6:44215256-44215483	chr6	+	44215331	44215473	True	NM_007355,NM_178148	chr6,chr6	+,-	HSP90AB1,SLC35B2	-533,9860
chr6:56910626-56911336	chr6	+	56910826	56911238	True	NM_020931,NM_183227	chr6,chr6	+,-	KIAA1586,RAB23	145,175069
chr19:4403257-4403779	chr19	+	4403452	4403796	True	NM_001199943,NM_003025,NM_001199944,NM_005483	chr19,chr19,chr19,chr19	-,-,-,+	SH3GL1,SH3GL1,SH3GL1,CHAF1A	-2887,-2887,-3037,-843
chrX:101181604-101183398	chrX	+	101181859	101183260	True	NM_001011657,NM_080390	chrX,chrX	-,+	ZMAT1,TCEAL2	3837,197399
chr11:73088400-73088703	chr11	+	73088481	73088729	True	NM_152222,NM_032871,NM_015159	chr11,chr11,chr11	+,+,-	RELT,RELT,FAM168A	-1127,-819,220549
chr22:43041960-43042579	chr22	+	43042000	43042372	True	NM_001171660,NM_001171661,NM_001129819,NM_000398,NM_007326,NR_029422,NM_001165877	chr22,chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,-,+,-	CYB5R3,CYB5R3,CYB5R3,CYB5R3,CYB5R3,RNU12,ATP5L2	-1360,673,673,3083,673,-30800,-5393
chr19:52901348-52901637	chr19	+	52901504	52901616	True	NM_001102657,NM_032423	chr19,chr19	-,+	ZNF836,ZNF528	-226608,-434
chr11:61222072-61222455	chr11	+	61222155	61222443	True	NM_001136040,NM_017841	chr11,chr11	-,+	CPSF7,SDHAF2	-24691,-24609
chr19:54384052-54384495	chr19	+	54384100	54384462	True	NM_144687,NM_002739	chr19,chr19	-,+	NLRP12,PRKCG	-56452,1004
chr11:57518615-57519860	chr11	+	57518665	57519683	True	NM_001085468,NM_001145101,NM_170746,NM_001085459,NM_001085458,NM_001085462,NM_001085463,NM_001085460,NM_001085461,NM_001085466,NM_001085467,NM_001085464,NM_001085465,NM_001085469,NM_001331	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,-,+,+,+,+,+,+,+,+,+,+,+,+,+	CTNND1,BTBD18,C11orf31,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1	9550,-10,-10002,9550,9550,9550,9550,9550,9550,9550,9550,9550,9550,9550,9550
chr15:75658112-75659243	chr15	+	75658438	75659096	True	NM_006715,NM_024608	chr15,chr15	-,+	MAN2C1,NEIL1	1895,-19170
chr4:25162351-25162714	chr4	+	25162361	25162705	True	NR_037934,NM_016955	chr4,chr4	+,-	LOC285540,SEPSECS	-118,-157
chr4:7758018-7758476	chr4	+	7758066	7758408	True	NM_001134647,NR_026892	chr4,chr4	-,+	AFAP1,AFAP1-AS1	183295,-2300
chr10:32632229-32633433	chr10	+	32632431	32633418	True	NM_025209,NM_001026383	chr10,chr10	-,+	EPC1,CCDC7	2755,101622
chr1:24469838-24471682	chr1	+	24469893	24471503	True	NM_021258,NR_027087	chr1,chr1	-,+	IL22RA1,LOC284632	-118,55226
chr20:35375717-35376290	chr20	+	35375769	35376010	True	NM_032013,NM_080628,NM_022477	chr20,chr20,chr20	-,+,-	NDRG3,C20orf118,NDRG3	-1288,128559,-1288
chr20:39996395-39997105	chr20	+	39996455	39996925	True	NM_022896,NM_052846	chr20,chr20	+,-	LPIN3,EMILIN3	-26947,-957
chr13:96633174-96633438	chr13	+	96633329	96633398	True	NM_153456,NM_020121	chr13,chr13	+,-	HS6ST3,UGGT2	109694,72389
chr19:17632691-17634106	chr19	+	17633307	17634015	True	NM_001098524,NM_173544,NM_138454	chr19,chr19,chr19	+,+,-	FAM129C,FAM129C,NXNL1	94,94,-61582
chr21:20231843-20233516	chr21	+	20232233	20233461	True	NM_002772,NM_001204174	chr21,chr21	-,+	TMPRSS15,CHODL	-456263,-614100
chr6:167651823-167652495	chr6	+	167651873	167652530	True	NM_005299,NM_001143947	chr6,chr6	-,+	GPR31,UNC93A	-80554,52272
chr17:68127222-68128975	chr17	+	68127233	68128867	True	NM_170742,NR_036534	chr17,chr17	+,-	KCNJ16,FLJ36644	-26290,36726
chr11:126078647-126079044	chr11	+	126078646	126079088	True	NM_001144827,NM_032795,NM_024556	chr11,chr11,chr11	-,-,+	RPUSD4,RPUSD4,FAM118B	2555,2555,2530
chr1:157016725-157017558	chr1	+	157016869	157017333	True	NM_198236,NM_014784,NR_001560	chr1,chr1,chr1	-,-,+	ARHGEF11,ARHGEF11,CYCSP52	-1707,-1707,80820
chr19:39972150-39972576	chr19	+	39972201	39972555	True	NM_001001563,NM_001020	chr19,chr19	+,-	TIMM50,RPS16	-1200,-45583
chr16:52689502-52690137	chr16	+	52689528	52690152	True	NR_033920,NM_025134	chr16,chr16	-,+	LOC643714,CHD9	-48641,398792
chrY:1339338-1339788	chrY	+	1339450	1339600	True	NM_172249,NM_001161529,NM_006140,NM_001161532,NM_022148,NM_172246,NM_172245,NR_027760,NM_001161531	chrY,chrY,chrY,chrY,chrY,chrY,chrY,chrY,chrY	+,+,+,+,-,+,+,+,+	CSF2RA,CSF2RA,CSF2RA,CSF2RA,CRLF2,CSF2RA,CSF2RA,CSF2RA,CSF2RA	-1819,-1819,-1819,-1819,-57920,-1819,-1819,-1819,-1819
chrY:1339338-1339788	chrX	+	1389450	1389600	False	NM_172249,NM_001161529,NM_006140,NM_001161532,NM_022148,NM_172246,NM_172245,NR_027760,NM_001161531	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,-,+,+,+,+	CSF2RA,CSF2RA,CSF2RA,CSF2RA,CRLF2,CSF2RA,CSF2RA,CSF2RA,CSF2RA	-1819,-1819,-1819,-1819,-57920,-1819,-1819,-1819,-1819
chr16:74399556-74400769	chr16	+	74399744	74400755	True	NR_026950,NM_002811	chr16,chr16	-,+	LOC283922,PSMD7	1448,-69122
chr16:74399556-74400769	chr16	-	70149605	70150554	False	NM_017990,NR_003610	chr16,chr16	+,-	PDPR,PDXDC2P	-2134,-49754
chr1:183003788-183004040	chr1	+	183003790	183004032	True	NM_030933,NM_002293	chr1,chr1	-,+	SHCBP1L,LAMC1	-81237,-11252
chr9:99385145-99386659	chr9	+	99385462	99386416	True	NR_026792,NM_003671,NM_033331	chr9,chr9,chr9	+,-,-	LOC441455,CDC14B,CDC14B	101686,-3350,-3350
chr10:102892909-102893280	chr10	+	102892941	102893327	True	NM_005521,NM_001195517,NM_001085398	chr10,chr10,chr10	+,+,-	TLX1,TLX1,TLX1NB	-1931,-1931,-2038
chr13:51684182-51684952	chr13	+	51684410	51684939	True	NR_003923,NM_145019	chr13,chr13	-,+	GUCY1B2,FAM124A	-44117,111567
chr10:27802007-27803310	chr10	+	27802518	27803314	True	NM_021252,NM_001034842	chr10,chr10	+,-	RAB18,PTCHD3	-9326,-99221
chr11:133402572-133403209	chr11	+	133402711	133403251	True	NR_027276,NM_001012393	chr11,chr11	+,-	LOC100128239,OPCML	498915,-308
chr12:123463200-123463403	chr12	+	123463205	123463451	True	NM_203444,NM_024623,NM_018694,NM_001002251,NM_001002252,NM_016638	chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,+,+,+	ABCB9,OGFOD2,ARL6IP4,ARL6IP4,ARL6IP4,ARL6IP4	-3453,-3902,1428,1428,1428,1428
chr9:117918312-117920095	chr9	+	117918500	117919688	True	NM_017418,NM_002160	chr9,chr9	+,-	DEC1,TNC	-14454,-38014
chr9:123867281-123868336	chr9	+	123867388	123868083	True	NM_007018,NM_001735	chr9,chr9	+,-	CEP110,C5	-16866,-54834
chrX:98088172-98089404	chrX	+	98088195	98089438	True	NM_022144,NR_024608	chrX,chrX	+,-	TNMD,LOC442459	1750351,1105459
chrX:135064791-135065609	chrX	+	135064993	135065647	True	NM_173470,NM_006359,NM_001042537,NM_001177651	chrX,chrX,chrX,chrX	-,+,+,+	MMGT1,SLC9A6,SLC9A6,SLC9A6	-8859,1938,1938,1935
chr3:119270188-119271055	chr3	+	119270274	119271034	True	NM_005191,NM_001125	chr3,chr3	-,+	CD80,ADPRH	7499,27488
chr22:37955025-37955286	chr22	+	37955059	37955167	True	NM_152243,NM_006498	chr22,chr22	+,-	CDC42EP1,LGALS2	1303,20907
chr19:49311415-49312705	chr19	+	49311443	49312638	True	NM_019113,NR_028451,NM_001164773,NR_028450,NM_001190	chr19,chr19,chr19,chr19,chr19	+,-,-,-,-	FGF21,BCAT2,BCAT2,BCAT2,BCAT2	-52150,1590,1732,1732,1732
chr17:15635506-15636538	chr17	+	15635580	15636532	True	NM_006470,NM_178571	chr17,chr17	-,+	TRIM16,TBC1D26	-49387,-40
chr17:15635506-15636538	chr17	-	18546768	18547704	False	NM_001037330,NM_001039397	chr17,chr17	+,-	TRIM16L,TBC1D28	77697,86
chr10:115440092-115440481	chr10	+	115440171	115440519	True	NM_198060,NM_001227,NM_033340,NM_033339,NM_033338	chr10,chr10,chr10,chr10,chr10	-,+,+,+,+	NRAP,CASP7,CASP7,CASP7,CASP7	-16366,-796,-1287,-796,-796
chr2:114258391-114259485	chr2	+	114258506	114259070	True	NM_012184,NR_024005	chr2,chr2	+,-	FOXD4L1,DDX11L2	-1900,100139
chr7:137001729-137002987	chr7	+	137001864	137002740	True	NM_002825,NR_030165	chr7,chr7	-,+	PTN,MIR490	25858,-414001
chr4:186126210-186126531	chr4	+	186126213	186126338	True	NM_020827,NM_031953	chr4,chr4	-,+	KIAA1430,SNX25	-1031,4945
chr16:401181-401464	chr16	+	401184	401254	True	NM_181050,NM_003502,NR_024453	chr16,chr16,chr16	-,-,+	AXIN1,AXIN1,LOC100134368	1472,1472,30986
chr1:222731516-222732097	chr1	+	222731562	222732115	True	NM_024746,NM_198551	chr1,chr1	-,+	HHIPL2,MIA3	-10118,59328
chr6:28047041-28047918	chr6	+	28047068	28047903	True	NM_003447,NR_002936	chr6,chr6	+,-	ZNF165,LOC222699	578,138854
chr8:9919997-9920216	chr8	+	9920076	9920269	True	NM_001135670,NR_029668,NM_012331	chr8,chr8,chr8	+,-,+	MSRA,MIR124-1,MSRA	-8298,-159094,-8298
chr10:124738204-124738950	chr10	+	124738220	124738716	True	NM_153336,NM_024942	chr10,chr10	+,-	PSTK,C10orf88	839,-24301
chr17:37411544-37411950	chr17	+	37411742	37411818	True	NM_198993,NM_000981	chr17,chr17	-,+	STAC2,RPL19	-29702,-55257
chr2:220082805-220083042	chr2	+	220082875	220083091	True	NM_018089,NM_138802,NM_005689	chr2,chr2,chr2	+,+,-	ANKZF1,ZFAND2B,ABCB6	11387,-11388,671
chr1:27561777-27562541	chr1	+	27562010	27562580	True	NM_015023,NM_003047	chr1,chr1	+,-	WDTC1,SLC9A1	-1054,-80559
chr11:67978661-67979215	chr11	+	67978665	67979099	True	NM_017635,NM_002335,NM_016028	chr11,chr11,chr11	-,+,-	SUV420H1,LRP5,SUV420H1	1735,101008,1735
chr19:37023160-37023701	chr19	+	37023290	37023397	True	NM_001012756,NM_001166036,NM_001166037,NR_036504,NM_001166038	chr19,chr19,chr19,chr19,chr19	-,-,-,+,-	ZNF260,ZNF260,ZNF260,LOC728752,ZNF260	-4042,-4042,-4042,-42820,-4042
chr10:73975011-73975428	chr10	+	73975179	73975464	True	NM_173473,NM_001198798,NM_001198800,NM_001198799,NM_015947	chr10,chr10,chr10,chr10,chr10	+,-,-,-,-	ANAPC16,ASCC1,ASCC1,ASCC1,ASCC1	341,337,769,769,337
chr2:6076967-6077381	chr2	+	6076991	6077372	True	NM_207315,NR_026832	chr2,chr2	-,+	CMPK2,LOC150622	928615,-4230
chr1:219609090-219609862	chr1	+	219609228	219609883	True	NM_138794,NM_018713	chr1,chr1	+,-	LYPLAL1,SLC30A10	-262100,492160
chr18:13916747-13917642	chr18	+	13916905	13917502	True	NM_005913,NM_000529	chr18,chr18	+,-	MC5R,MC2R	-91419,-1370
chr16:30718948-30720261	chr16	+	30719055	30719404	True	NR_002966,NM_001014979,NM_006662	chr16,chr16,chr16	+,-,+	SNORA30,C16orf93,SRCAP	2453,54212,-8644
chr15:40763799-40764395	chr15	+	40763817	40764387	True	NM_130468,NR_002208	chr15,chr15	+,-	CHST14,MRPL42P5	-708,60412
chr5:176320348-176321868	chr5	+	176320353	176321721	True	NM_133369,NM_002115	chr5,chr5	+,-	UNC5A,HK3	-82844,4664
chr15:66162832-66163189	chr15	+	66162836	66163201	True	NM_004663,NM_005848	chr15,chr15	+,-	RAB11A,DENND4A	-1091,-78205
chr8:146173296-146175167	chr8	+	146173312	146174335	True	NM_001029976,NM_006958,NR_002807	chr8,chr8,chr8	-,-,+	ZNF16,ZNF16,TMED10P1	1990,1990,45915
chr12:56102220-56103864	chr12	+	56102225	56103782	True	NM_001144996,NM_001144997,NR_037656,NR_037658,NR_037655,NR_037657,NM_001487,NM_002206	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,-,+,+,+,+,+,-	ITGA7,ITGA7,BLOC1S1,BLOC1S1-RDH5,BLOC1S1,BLOC1S1,BLOC1S1,ITGA7	-539,2360,6293,6035,6035,6293,6035,-539
chr17:29158857-29159069	chr17	+	29158872	29159064	True	NM_015986,NM_024857	chr17,chr17	-,+	CRLF3,ATAD5	-7094,-8
chr5:70880294-70881185	chr5	+	70880726	70881237	True	NM_022132,NR_033968	chr5,chr5	+,-	MCCC2,LOC100049076	1877,-325604
chr2:26989388-26990588	chr2	+	26989521	26990490	True	NM_017877,NM_001029881	chr2,chr2	+,-	C2orf18,CIB4	-2430,-125310
chr17:39408723-39410650	chr17	+	39409009	39410169	True	NM_030975,NM_001146182,NM_033191	chr17,chr17,chr17	+,-,+	KRTAP9-9,KRTAP16-1,KRTAP9-4	1466,55399,-3129
chr10:70747999-70748453	chr10	+	70748139	70748473	True	NM_001057,NM_015634	chr10,chr10	-,+	TACR2,KIAA1279	428251,3
chr19:15492918-15494901	chr19	+	15492924	15494466	True	NM_005858,NR_031716	chr19,chr19	-,+	AKAP8,MIR1470	-2321,65892
chr12:976009-977468	chr12	+	976606	977423	True	NM_134424,NM_213655	chr12,chr12	-,+	RAD52,WNK1	81498,-114573
chr21:44811580-44812012	chr21	+	44811665	44811813	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	58090,35239
chr2:166811351-166812919	chr2	+	166811471	166812924	True	NM_024969,NM_024753	chr2,chr2	+,-	CSRNP3,TTC21B	-382676,-1123
chr22:21398857-21399576	chr22	+	21398885	21399453	True	NR_027006,NR_002829	chr22,chr22	+,-	LOC400891,P2RX6P	795,-347
chr19:49557271-49557579	chr19	+	49557410	49557489	True	NM_033183,NM_006179,NM_033043,NM_033142	chr19,chr19,chr19,chr19	-,-,+,-	CGB8,NTF4,CGB5,CGB7	-5042,9686,-10364,1559
chr5:115177378-115177714	chr5	+	115177386	115177546	True	NM_001284,NR_033362,NR_033363,NM_004707	chr5,chr5,chr5,chr5	+,-,-,-	AP3S1,ATG12,ATG12,ATG12	72,52,52,52
chr1:248059442-248061290	chr1	+	248059538	248061138	True	NM_001001959,NM_001001957	chr1,chr1	-,+	OR11L1,OR2W3	-54340,-700
chr7:75721210-75723181	chr7	+	75721366	75723093	True	NM_005918,NM_016086	chr7,chr7	+,-	MDH2,STYXL1	-44024,-44045
chr9:38414515-38415974	chr9	+	38414520	38415766	True	NM_001007563,NM_000692	chr9,chr9	-,+	IGFBPL1,ALDH1B1	8728,-21869
chr14:73392142-73392657	chr14	+	73392204	73392706	True	NM_181340,NM_181341,NM_015604,NM_012074,NM_001163508,NM_001163509	chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,-,+,+	DCAF4,DCAF4,DCAF4,DPF3,DCAF4,DCAF4	333,333,333,-31395,333,333
chr2:64880861-64881077	chr2	+	64880866	64881064	True	NM_014755,NR_034023	chr2,chr2	-,+	SERTAD2,LOC339807	32,-46471
chr4:39481686-39482021	chr4	+	39481963	39482069	True	NR_026854,NM_000661	chr4,chr4	+,-	LOC401127,RPL9	-139,-21395
chr4:86395916-86396155	chr4	+	86396002	86396072	True	NM_001025616,NM_014991	chr4,chr4	+,-	ARHGAP24,WDFY3	211,-508458
chr15:41223934-41224535	chr15	+	41223946	41224414	True	NM_019074,NM_133639	chr15,chr15	+,-	DLL4,RHOV	-2466,-57459
chr12:27920357-27921137	chr12	+	27920737	27920941	True	NM_001146221,NM_020782	chr12,chr12	-,+	LOC100287284,KLHDC5	3318,12245
chr3:71834579-71834824	chr3	+	71834582	71834862	True	NM_018971,NM_001126128,NM_021935	chr3,chr3,chr3	+,-,-	GPR27,PROK2,PROK2	-31432,-225,-225
chr2:70530351-70531004	chr2	+	70530560	70531050	True	NM_032822,NM_003096,NM_016297	chr2,chr2,chr2	-,-,+	FAM136A,SNRPG,PCYOX1	-1340,-9691,-45380
chr2:96013633-96014011	chr2	+	96013634	96014052	True	NM_001164464,NM_001034914	chr2,chr2	-,+	TRIM43B,KCNIP3	136477,-917
chr20:23103321-23104217	chr20	+	23103320	23104174	True	NR_034149,NM_001052	chr20,chr20	-,+	LOC200261,SSTR4	9149,-87314
chr11:77702488-77704273	chr11	+	77702495	77704287	True	NM_003251,NM_033547	chr11,chr11	+,-	THRSP,INTS4	70619,1480
chr1:202780827-202781379	chr1	+	202780853	202781351	True	NM_006618,NR_002929	chr1,chr1	-,+	KDM5B,LOC148709	-3304,49530
chr12:123941488-123941913	chr12	+	123941747	123941825	True	NM_022717,NM_180699,NM_145058	chr12,chr12,chr12	+,+,-	SNRNP35,SNRNP35,RILPL2	825,2560,-20483
chr9:19379982-19380334	chr9	+	19379991	19380319	True	NM_001010,NM_001010887	chr9,chr9	-,+	RPS6,ACER2	-2,28605
chr22:23874755-23875667	chr22	+	23874759	23875529	True	NM_153615,NM_020070	chr22,chr22	+,-	RGL4,IGLL1	157518,47016
chr20:2672098-2672906	chr20	+	2672158	2672818	True	NM_174856,NM_001110514	chr20,chr20	-,+	IDH3B,EBF4	-27315,705
chr5:114513527-114514402	chr5	+	114513641	114514230	True	NM_001284,NM_001017398,NM_001017397,NM_018700	chr5,chr5,chr5,chr5	+,-,-,-	AP3S1,TRIM36,TRIM36,TRIM36	663388,2063,2063,2063
chr16:4840579-4841272	chr16	+	4840901	4841259	True	NR_029454,NR_029455,NR_029453,NM_001154458,NM_144605	chr16,chr16,chr16,chr16,chr16	+,+,+,-,-	LOC440335,LOC440335,LOC440335,SEPT12,SEPT12	-2496,4119,-2555,-2502,-2502
chr9:131874500-131875074	chr9	+	131874499	131874939	True	NM_178003,NM_178001,NM_178000,NM_021131,NR_028048,NM_001193397,NM_000755	chr9,chr9,chr9,chr9,chr9,chr9,chr9	+,+,+,+,-,+,-	PPP2R4,PPP2R4,PPP2R4,PPP2R4,CRAT,PPP2R4,CRAT	-962,-962,-962,-1327,-1429,-588,-1429
chr3:127872750-127873451	chr3	+	127872855	127873205	True	NM_021937,NM_003707	chr3,chr3	+,-	EEFSEC,RUVBL1	-593,-30184
chr4:83349217-83350119	chr4	+	83349260	83349956	True	NM_021204,NM_031372,NR_003249	chr4,chr4,chr4	+,-,-	ENOPH1,HNRPDL,HNRPDL	1769,1472,1472
chr3:27761635-27762422	chr3	+	27761741	27762362	True	NM_005442,NM_182523	chr3,chr3	-,+	EOMES,CMC1	1473,520761
chr2:1748945-1749392	chr2	+	1749065	1749417	True	NM_012293,NM_175722	chr2,chr2	-,+	PXDN,TPO	-774,-330936
chr11:57520424-57520666	chr11	+	57520435	57520631	True	NM_001085468,NM_001145101,NM_001331,NM_001085459,NM_001085458,NM_001085462,NM_001085463,NM_001085460,NM_001085461,NM_001085466,NM_001085467,NM_001085464,NM_001085465,NM_001085469	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,-,+,+,+,+,+,+,+,+,+,+,+,+	CTNND1,BTBD18,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1	8602,-1182,8602,8602,8602,8602,8602,8602,8602,8602,8602,8602,8602,8602
chr2:148774960-148775765	chr2	+	148775305	148775646	True	NM_001190881,NM_001190882,NM_001190879,NM_018328,NM_181741,NM_181742,NM_002552	chr2,chr2,chr2,chr2,chr2,chr2,chr2	-,-,-,+,-,-,-	ORC4,ORC4,ORC4,MBD5,ORC4,ORC4,ORC4	2737,2713,2723,2933,2870,3580,2736
chr9:6278616-6279060	chr3	+	150342650	150344822	True	NM_016275,NM_014445	chr3,chr3	+,-	SELT,SERP1	-23757,-78222
chr19:41945832-41946151	chr19	+	41945834	41946018	True	NM_001167869,NM_001167868,NM_018035,NM_001167867,NM_001167871,NM_001167870,NR_030765,NM_001130514	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,+	ATP5SL,ATP5SL,ATP5SL,ATP5SL,ATP5SL,ATP5SL,ATP5SL,C19orf69	9,-353,9,-353,9,9,9,3044
chr2:109335951-109336172	chr2	+	109335951	109336117	True	NM_022336,NM_006267	chr2,chr2	-,+	EDAR,RANBP2	269761,-65
chr16:89981882-89982266	chr16	+	89981912	89982156	True	NM_002386,NM_145039,NM_001197181,NM_006086	chr16,chr16,chr16,chr16	+,-,+,+	MC1R,CENPBD1,TUBB3,TUBB3	2130,57134,6260,7530
chr11:113781455-113781707	chr11	+	113781454	113781538	True	NM_020886,NM_006028	chr11,chr11	-,+	USP28,HTR3B	-35198,-5918
chr11:57478702-57478915	chr11	+	57478734	57478844	True	NM_153450,NM_015959,NM_001144012,NR_037646,NR_037645,NR_026593	chr11,chr11,chr11,chr11,chr11,chr11	-,+,+,+,+,+	MED19,TMX2,TMX2,TMX2-CTNND1,TMX2,TMX2	883,1150,1150,1150,1150,1150
chr2:79736974-79738700	chr2	+	79737097	79738710	True	NM_001164883,NM_004389,NR_036231	chr2,chr2,chr2	+,+,-	CTNNA2,CTNNA2,MIR4264	1349,1349,137826
chr12:13022968-13024750	chr12	+	13023494	13024621	True	NM_018654,NR_003932	chr12,chr12	-,+	GPRC5D,RPL13AP20	78755,3789
chrX:150065750-150066791	chrX	+	150065845	150066657	True	NM_031462,NM_001184808,NM_134446,NM_134445,NM_005342	chrX,chrX,chrX,chrX,chrX	-,-,-,-,+	CD99L2,CD99L2,CD99L2,CD99L2,HMGB3	682,682,682,682,85105
chr1:119959173-119960005	chr1	+	119959273	119960009	True	NM_000198,NR_036540,NM_001166120	chr1,chr1,chr1	+,-,+	HSD3B2,LOC644242,HSD3B2	-1581,181955,-1770
chr4:13542949-13543564	chr4	+	13543034	13543290	True	NR_034054,NR_015450,NM_001189,NR_003132	chr4,chr4,chr4,chr4	-,-,-,+	LOC285547,LOC285548,NKX3-2,HSP90AB2P	-9993,6208,2874,-208048
chr3:194405243-194405679	chr3	+	194405279	194405724	True	NM_018385,NM_153690	chr3,chr3	-,+	LSG1,FAM43A	-12073,897
chr1:11743950-11744268	chr1	+	11744061	11744221	True	NM_198545,NM_001127325,NM_006341	chr1,chr1,chr1	+,-,-	C1orf187,MAD2L2,MAD2L2	7559,7507,-2790
chrX:44207097-44208519	chrX	+	44207357	44208023	True	NM_022076,NM_025184	chrX,chrX	+,-	DUSP21,EFHC2	495225,-4434
chr1:28100122-28101941	chr1	+	28100232	28101632	True	NM_177424,NM_022873	chr1,chr1	+,-	STX12,IFI6	-589,-101508
chr9:112080925-112081170	chr9	+	112081012	112081196	True	NM_018424,NM_019114,NM_001037293	chr9,chr9,chr9	-,-,+	EPB41L4B,EPB41L4B,PALM2	1875,1875,321871
chr6:80714238-80714445	chr6	+	80714279	80714471	True	NM_022726,NM_001166691,NM_003318	chr6,chr6,chr6	-,+,+	ELOVL4,TTK,TTK	-56964,-8,-8
chr20:630065-631428	chr20	+	630546	631450	True	NM_080725,NM_001042353	chr20,chr20	-,+	SRXN1,FAM110A	2490,182905
chr2:220117111-220117658	chr2	+	220117191	220117693	True	NM_006000,NR_003063,NR_026909,NM_024506,NM_001008910	chr2,chr2,chr2,chr2,chr2	-,+,+,-,+	TUBA4A,TUBA4B,STK16,GLB1L,STK16	995,271,-7041,-7060,-7050
chr8:72259648-72261447	chr8	+	72259837	72261487	True	NR_033652,NM_172058,NM_172059,NM_172060	chr8,chr8,chr8,chr8	+,-,-,-	LOC100132891,EYA1,EYA1,EYA1	493870,7544,7544,7544
chr2:233734505-233735042	chr2	+	233734532	233734982	True	NM_001114090,NM_206895	chr2,chr2	-,+	NGEF,C2orf82	57929,11
chr11:12309858-12310198	chr11	+	12309862	12310196	True	NM_013253,NM_032867	chr11,chr11	-,+	DKK3,MICALCL	-278945,-1466
chr13:46648499-46650202	chr13	+	46648596	46650202	True	NM_015070,NM_152719	chr13,chr13	-,+	ZC3H13,SPERT	-21702,-372201
chr22:46665982-46666586	chr22	+	46666050	46666455	True	NM_006071,NM_017931	chr22,chr22	-,+	PKDREJ,TTC38	-6831,-2240
chr1:177144711-177145986	chr1	+	177144759	177146016	True	NM_207108,NM_021165	chr1,chr1	-,+	ASTN1,FAM5B	-10735,-4184
chr19:55337458-55337928	chr19	+	55337463	55337700	True	NM_012314,NM_013289,NM_001127255	chr19,chr19,chr19	+,+,-	KIR2DS4,KIR3DL1,NLRP7	6473,-9628,121224
chr19:55337458-55337928	chr19	+	55355490	55355541	False	NM_006737,NM_001127255	chr19,chr19	+,-	KIR3DL2,NLRP7	6356,103383
chr14:63687902-63688713	chr14	+	63688060	63688520	True	NM_145171,NM_020663	chr14,chr14	-,+	GPHB5,RHOJ	96093,-16967
chr4:83502772-83503780	chr4	+	83502944	83503363	True	NM_001080506,NM_021204	chr4,chr4	-,+	TMEM150C,ENOPH1	-19818,-151278
chr10:64577266-64577496	chr10	+	64577317	64577461	True	NM_001136179,NM_001136178,NM_032804,NM_001136177,NM_000399	chr10,chr10,chr10,chr10,chr10	-,-,+,-,-	EGR2,EGR2,ADO,EGR2,EGR2	-1191,1516,-12852,-1191,-1191
chr2:99350796-99352048	chr2	+	99350908	99351725	True	NM_012214,NM_014044	chr2,chr2	-,+	MGAT4A,UNC50	-3319,-125917
chr16:31215573-31215867	chr16	+	31215740	31215800	True	NM_145182,NM_001008274,NM_013258	chr16,chr16,chr16	-,+,-	PYCARD,TRIM72,PYCARD	-1643,9541,-1643
chr19:29418399-29418728	chr19	+	29418432	29418728	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	37309,285458
chr12:88974654-88975421	chr12	+	88974657	88975469	True	NM_003994,NM_000899,NM_181783	chr12,chr12,chr12	-,-,+	KITLG,KITLG,TMTC3	-407,-407,-438635
chr19:42806503-42806710	chr19	+	42806552	42806684	True	NM_199285,NM_001145939,NM_002573,NM_001145940	chr19,chr19,chr19,chr19	+,-,-,-	PRR19,PAFAH1B3,PAFAH1B3,PAFAH1B3	-319,295,162,318
chr8:37620811-37621062	chr8	+	37620901	37621068	True	NR_003671,NM_007198	chr8,chr8	-,+	LOC728024,PROSC	-15337,-851
chr3:183354384-183354594	chr3	+	183354431	183354501	True	NM_130446,NM_017644	chr3,chr3	-,+	KLHL6,KLHL24	-80932,-1071
chr19:58327853-58329166	chr19	+	58328307	58329120	True	NR_024162,NM_001204818,NM_024762	chr19,chr19,chr19	-,+,-	FKBP1AP1,LOC100293516,ZNF552	9767,12541,-2026
chr18:13611337-13611789	chr18	+	13611413	13611727	True	NM_001003675,NM_001003674,NM_001098801,NM_181483,NM_004338	chr18,chr18,chr18,chr18,chr18	+,+,-,+,+	C18orf1,C18orf1,C18orf19,C18orf1,C18orf1	-32,-32,114914,9139,9139
chr4:21949399-21949946	chr4	+	21949428	21949906	True	NM_001128432,NM_147182	chr4,chr4	+,-	GBA3,KCNIP4	744641,518
chr12:81489356-81490354	chr12	+	81489473	81490161	True	NM_024560,NM_004664	chr12,chr12	+,-	ACSS3,LIN7A	-17715,-157779
chr6:42928933-42929249	chr6	+	42929024	42929282	True	NM_018960,NM_000287	chr6,chr6	+,-	GNMT,PEX6	-582,17749
chr17:40307901-40308219	chr17	+	40307973	40308257	True	NM_004583,NM_201434,NM_033194	chr17,chr17,chr17	-,-,+	RAB5C,RAB5C,HSPB9	-951,-951,-33268
chr9:34990938-34991436	chr9	+	34990987	34991432	True	NM_001135004,NM_001135005,NM_012266,NM_007126	chr9,chr9,chr9,chr9	+,+,+,-	DNAJB5,DNAJB5,DNAJB5,VCP	-1321,-779,-1321,81357
chr10:6317736-6319477	chr10	+	6317963	6318876	True	NM_004566,NM_000417	chr10,chr10	+,-	PFKFB3,IL2RA	-73182,-213630
chr16:30774858-30775537	chr16	+	30774966	30775484	True	NM_001195620,NM_014771,NM_001014979	chr16,chr16,chr16	-,+,-	C16orf93,RNF40,C16orf93	-1401,-1394,-1401
chr15:65423153-65424009	chr15	+	65423191	65423817	True	NM_005707,NM_001101362	chr15,chr15	-,+	PDCD7,KBTBD13	2407,-54099
chr11:129244960-129245251	chr11	+	129245074	129245297	True	NM_001142685,NM_003658	chr11,chr11	-,+	ARHGAP32,BARX2	-182981,583
chr3:9005197-9005398	chr3	+	9005233	9005447	True	NM_020165,NM_001234	chr3,chr3	-,+	RAD18,CAV3	-74,-229788
chr10:94591063-94591281	chr10	+	94591098	94591173	True	NM_004969,NM_001013848	chr10,chr10	-,+	IDE,EXOC6	-257246,3296
chr3:158832715-158833569	chr3	+	158832844	158833446	True	NM_002888,NM_001197114	chr3,chr3	-,+	RARRES1,IQCJ-SCHIP1	-382569,-45859
chr20:39967549-39968021	chr20	+	39967888	39968026	True	NM_052846,NM_022896	chr20,chr20	-,+	EMILIN3,LPIN3	27524,1533
chr15:83736194-83736546	chr15	+	83736278	83736558	True	NM_001011885,NM_001144903,NM_025238	chr15,chr15,chr15	-,+,-	BTBD1,TM6SF1,BTBD1	-172,39765,-172
chr18:8610530-8612399	chr18	+	8610913	8612401	True	NM_001025300,NR_024419	chr18,chr18	+,-	RAB12,LOC100192426	-1530,-243881
chrX:128980906-128982107	chrX	+	128981143	128981738	True	NM_001008222,NM_001166221,NM_016032	chrX,chrX,chrX	-,+,-	ZDHHC9,UTP14A,ZDHHC9	-3582,58358,-3233
chr11:20381788-20382234	chr11	+	20381792	20382172	True	NM_001029865,NM_006410,NM_001098521,NM_001098520,NM_001098523,NM_001098522	chr11,chr11,chr11,chr11,chr11,chr11	-,+,+,+,+,+	DBX1,HTATIP2,HTATIP2,HTATIP2,HTATIP2,HTATIP2	-199922,3058,3074,3116,3514,3230
chr22:35558348-35559692	chr22	+	35558353	35559736	True	NM_001003681,NM_005368	chr22,chr22	+,-	HMGXB4,MB	93708,453703
chr2:43863422-43863837	chr2	+	43863429	43863885	True	NM_001101330,NM_172069	chr2,chr2	-,+	LOC728819,PLEKHH2	39626,553
chr22:40301220-40301912	chr22	+	40301281	40301943	True	NM_004810,NM_152512	chr22,chr22	+,-	GRAP2,ENTHD1	-4260,-11487
chr3:113127125-113128853	chr3	+	113127177	113128888	True	NM_017699,NM_001164496	chr3,chr3	+,-	SIDT1,WDR52	122329,31523
chr7:105753473-105754070	chr7	+	105753508	105753862	True	NM_152750,NM_006754,NM_182715	chr7,chr7,chr7	+,-,-	CDHR3,SYPL1,SYPL1	-149902,-451,-750
chr4:56720116-56720332	chr4	+	56720127	56720291	True	NM_178237,NM_006681,NM_001024924,NM_018261	chr4,chr4,chr4,chr4	+,-,+,+	EXOC1,NMU,EXOC1,EXOC1	-362,-217662,-362,-362
chr1:210502736-210503182	chr1	+	210502814	210503078	True	NM_001170588,NM_018194,NM_001170580,NM_001170564,NM_001170587,NR_024337,NM_001122834	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-,+	HHAT,HHAT,HHAT,HHAT,HHAT,C1orf133,HHAT	-615,-615,-225,-1269,-615,-95348,-1269
chr15:75019861-75020821	chr15	+	75020030	75020562	True	NM_000499,NM_000761	chr15,chr15	-,+	CYP1A1,CYP1A2	-2153,20621
chr6:90539028-90539625	chr6	+	90539042	90539573	True	NM_001137667,NM_014611,NM_001137668,NM_012115	chr6,chr6,chr6,chr6	+,-,+,+	CASP8AP2,MDN1,CASP8AP2,CASP8AP2	45,-9600,45,45
chr7:23511002-23511387	chr7	+	23511099	23511425	True	NR_026676,NM_006547	chr7,chr7	+,-	RPS2P32,IGF2BP3	18581,-1104
chr5:68931496-68932053	chr5	+	68931505	68931713	True	NR_027439,NM_001042490	chr5,chr5	-,+	LOC100272216,GTF2H2D	-2477,-75482
chr5:68931496-68932053	chr5	+	69786334	69786542	False	NR_033417,NR_033968	chr5,chr5	+,-	GTF2H2B,LOC100049076	-75188,64658
chr5:68931496-68932053	chr5	+	69807615	69807823	False	NR_033417,NR_033968	chr5,chr5	+,-	GTF2H2B,LOC100049076	-96469,43377
chr1:51424217-51425386	chr1	+	51424493	51425371	True	NM_001262,NM_007051	chr1,chr1	+,-	CDKN2C,FAF1	8995,615
chr5:176560263-176560500	chr5	+	176560267	176560395	True	NM_172349,NM_022455,NM_001199298	chr5,chr5,chr5	+,+,-	NSD1,NSD1,UIMC1	-238,437,-126472
chr16:22531253-22532102	chr16	+	22531374	22531769	True	NM_001135865,NR_027460	chr16,chr16	+,-	LOC100132247,RRN3P3	-6581,-82338
chr16:22531253-22532102	chr16	-	21429776	21430171	False	NR_026675,NM_130464	chr16,chr16	+,-	NCRNA00169,NPIPL3	-117660,6537
chr16:22531253-22532102	chr16	-	21862046	21862441	False	NM_003366,NR_003370	chr16,chr16	+,-	UQCRC2,RRN3P1	102167,-31551
chr16:22531253-22532102	chr16	-	29510291	29510686	False	NR_002557,NM_177552	chr16,chr16	-,+	LOC613038,SULT1A3	-31392,-39138
chr16:22531253-22532102	chr16	-	30250259	30250654	False	NR_002555,NM_177552	chr16,chr16	-,+	LOC613037,SULT1A3	6328,-39764
chr2:111229425-111230666	chr2	+	111229466	111230650	True	NR_037626,NR_038099,NR_027467,NM_001205288,NR_027145,NM_033514	chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-	LOC100507334,LOC100288695,LIMS3,LOC100288695,LIMS3-LOC440895,LIMS3	-226310,52,52,52,52,52
chr2:111229425-111230666	chr2	-	109271235	109272419	False	NM_001193485,NM_022336	chr2,chr2	+,-	LIMS1,EDAR	-19,333467
chr2:111229425-111230666	chr2	-	110656010	110657194	False	NR_036225,NR_038099,NR_027467,NM_001205288,NR_027145,NM_033514	chr2,chr2,chr2,chr2,chr2,chr2	-,+,+,+,+,+	MIR4267,LOC100288695,LIMS3,LOC100288695,LIMS3-LOC440895,LIMS3	170483,-52,-52,-52,-52,-52
chr1:16481816-16482042	chr1	+	16481903	16482007	True	NM_001165945,NM_004431	chr1,chr1	+,-	CLCNKB,EPHA2	-106670,625
chr6:131956036-131956811	chr6	+	131956055	131956800	True	NM_015979,NM_004830,NM_005021	chr6,chr6,chr6	-,-,+	MED23,MED23,ENPP3	-6692,-6692,1641
chr19:9717275-9718840	chr19	+	9717453	9718888	True	NM_001048241,NM_152289	chr19,chr19	+,-	UBL5,ZNF561	219679,13078
chr17:7387289-7387707	chr17	+	7387378	7387702	True	NM_000937,NM_020899,NM_001128833,NM_001102614	chr17,chr17,chr17,chr17	+,-,-,+	POLR2A,ZBTB4,ZBTB4,AMAC1L3	-5,-84,-4434,-2709
chr17:4460228-4460491	chr17	+	4460233	4460531	True	NM_198501,NM_001122890,NM_014520,NM_153338,NM_001105538	chr17,chr17,chr17,chr17,chr17	+,-,-,-,-	SMTNL2,GGT6,MYBBP1A,GGT6,MYBBP1A	26744,3395,-1552,3395,-1552
chrX:46692110-46693526	chrX	+	46692293	46693497	True	NM_032591,NM_006915	chrX,chrX	-,+	SLC9A7,RP2	-73821,2849
chr3:11311708-11312997	chr3	+	11311939	11312838	True	NM_006395,NM_001144912,NM_001136031,NM_001128221	chr3,chr3,chr3,chr3	+,+,+,-	ATG7,ATG7,ATG7,VGLL4	1171,1171,1171,297612
chr5:45695321-45695550	chr5	+	45695402	45695478	True	NM_021072,NM_016640	chr5,chr5	-,+	HCN1,MRPS30	792,-886426
chr8:124888689-124889948	chr8	+	124889065	124889903	True	NM_004306,NM_001039112	chr8,chr8	-,+	ANXA13,FER1L6	-139418,-24889
chr1:157776625-157776890	chr1	+	157776624	157776920	True	NM_001159397,NM_018240	chr1,chr1	-,+	FCRL1,KIRREL	13070,186142
chr11:62448122-62448701	chr11	+	62448236	62448723	True	NM_203422,NM_015853,NM_001085372,NM_024099	chr11,chr11,chr11,chr11	-,-,+,-	LRRN4CL,UBXN1,C11orf83,C11orf48	8698,-1709,-9161,-8995
chr9:130158977-130159435	chr9	+	130159056	130159340	True	NM_014580,NR_002449	chr9,chr9	+,-	SLC2A8,SNORA65	124,51626
chr1:46768964-46769326	chr1	+	46769032	46769372	True	NM_006369,NM_006004	chr1,chr1	-,+	LRRC41,UQCRH	6,7
chr12:133756420-133757945	chr12	+	133757124	133757875	True	NM_001191054,NM_152943,NM_003415,NM_001165885,NM_001165884,NM_001165887,NM_001165886,NM_001165881,NM_001165883	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,+,+,+,+,+,+	LOC647589,ZNF268,ZNF268,ZNF268,ZNF268,ZNF268,ZNF268,ZNF268,ZNF268	54602,119,119,119,119,119,119,184,119
chr11:8285029-8285482	chr11	+	8285028	8285459	True	NM_002315,NM_177972	chr11,chr11	-,+	LMO1,TUB	-2,-182171
chr10:65223085-65224692	chr10	+	65223252	65224696	True	NR_027182,NM_032776	chr10,chr10	+,-	LOC84989,JMJD1C	292,1077
chr6:26987490-26987778	chr6	+	26987584	26987691	True	NR_026775,NR_026776	chr6,chr6	+,-	NCRNA00240,LOC100270746	-62863,445
chr19:11651674-11652701	chr19	+	11651758	11652382	True	NM_016581,NM_001299	chr19,chr19	-,+	ECSIT,CNN1	-11771,-2230
chr21:33031196-33031521	chr21	+	33031328	33031564	True	NM_000454,NM_001145444	chr21,chr21	+,-	SOD1,SCAF4	370,72917
chr16:72031205-72031501	chr16	+	72031301	72031369	True	NM_001361,NM_181536	chr16,chr16	+,-	DHODH,PKD1L3	11273,2558
chr12:53050241-53051509	chr12	+	53050281	53051425	True	NM_199187,NM_000423	chr12,chr12	+,-	KRT18,KRT2	291229,-4322
chr12:54521467-54521714	chr12	+	54521487	54521761	True	NR_026656,NR_026658	chr12,chr12	+,-	LOC400043,LOC100240735	-1683,-45880
chr9:34180360-34181051	chr9	+	34180542	34180778	True	NR_033243,NM_016525,NM_015397,NM_001171204,NM_001171202,NM_001171203,NM_001171201	chr9,chr9,chr9,chr9,chr9,chr9,chr9	+,+,-,+,+,+,+	UBAP1,UBAP1,DCAF12,UBAP1,UBAP1,UBAP1,UBAP1	-1599,-1599,-53771,-1599,-1599,-1599,-1599
chrX:153862383-153863053	chrX	+	153862519	153863033	True	NR_027401,NM_139250,NR_027402	chrX,chrX,chrX	-,+,-	NCRNA00204,CTAG1A,NCRNA00204B	-1071,-49152,-1071
chrX:153862383-153863053	chrX	-	153797893	153798407	False	NM_001042351,NR_027401,NR_027402	chrX,chrX,chrX	-,+,+	G6PD,NCRNA00204,NCRNA00204B	-22106,1071,1071
chr9:74765777-74766614	chr9	+	74765857	74766348	True	NM_004293,NM_001128618	chr9,chr9	+,-	GDA,C9orf57	-1620,-90336
chr2:30365906-30367835	chr2	+	30366086	30367544	True	NM_004304,NM_001127399,NM_016061,NM_001127401,NM_001127400	chr2,chr2,chr2,chr2,chr2	-,+,+,+,+	ALK,YPEL5,YPEL5,YPEL5,YPEL5	-221609,2205,2205,2205,2205
chr5:170321797-170323756	chr5	+	170321796	170323390	True	NR_037474,NM_022897	chr5,chr5	-,+	MIR3912,RANBP17	490424,-32958
chr6:150389778-150390001	chr6	+	150389934	150389994	True	NM_030949,NM_024518	chr6,chr6	+,-	PPP1R14C,ULBP3	74193,258
chr18:52499097-52499932	chr18	+	52499337	52499971	True	NM_004163,NM_001143829	chr18,chr18	+,-	RAB27B,CCDC68	-3548,125358
chr12:18428018-18428361	chr12	+	18428117	18428257	True	NM_004570,NM_024730	chr12,chr12	+,-	PIK3C2G,RERGL	-13695,-185003
chrX:129487599-129488178	chrX	+	129487740	129487969	True	NM_022810,NM_178471	chrX,chrX	+,-	SLC25A14,GPR119	-13752,31600
chr2:65657929-65658215	chr2	+	65658007	65658179	True	NM_181784,NM_005722	chr2,chr2	-,+	SPRED2,ACTR2	1527,-203229
chr1:53392725-53393021	chr1	+	53392757	53392887	True	NM_002979,NM_001198962,NM_001193599,NM_001193600,NM_001193617,NM_018281,NM_001198961,NM_001007098	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,-,+,+,+,-,-,+	SCP2,ECHDC2,SCP2,SCP2,SCP2,ECHDC2,ECHDC2,SCP2	13,-5311,13,13,13,-5311,-5311,13
chr4:15963879-15964174	chr4	+	15963878	15964170	True	NM_031950,NM_001775	chr4,chr4	-,+	FGFBP2,CD38	739,-183998
chr9:99615410-99616369	chr9	+	99615579	99616233	True	NR_028350,NM_001001662	chr9,chr9	+,-	LOC441454,ZNF782	55123,206
chr19:42382601-42383226	chr19	+	42382683	42383207	True	NM_198977,NM_001783,NM_021601,NM_004706,NM_199002,NM_173506	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,-	ARHGEF1,CD79A,CD79A,ARHGEF1,ARHGEF1,LYPD4	4059,-1544,-1544,4059,5238,-34175
chr17:2243023-2243969	chr17	+	2243038	2243848	True	NR_003072,NM_014853,NM_018128,NM_001098509	chr17,chr17,chr17,chr17	-,+,-,+	SNORD91A,SGSM2,TSR1,SGSM2	-9374,-2283,-2360,-2281
chr1:143742941-143743394	chr1	+	143742988	143743324	True	NR_033189,NR_027469,NR_027468	chr1,chr1,chr1	+,-,-	LOC100130000,LOC100286793,FLJ39739	-55909,1313,1183
chr1:143742941-143743394	chr1	+	144519699	144519898	False	NR_024584,NM_001037675	chr1,chr1	-,+	LOC728875,NBPF9	2122,95060
chr1:143742941-143743394	chr1	+	144339312	144339649	False	NR_024584,NM_001037675,NR_024510,NR_024511	chr1,chr1,chr1,chr1	-,+,-,-	LOC728875,NBPF9,LOC728855,LOC728855	2157,275309,1175,1175
chr1:143742941-143743394	chr1	+	147930510	147930847	False	NM_001097616,NR_027468	chr1,chr1	+,-	GPR89C,FLJ39739	-504994,1184
chr1:143742941-143743394	chr1	-	149577576	149577913	False	NM_001024599,NR_024510	chr1,chr1	-,+	HIST2H2BF,LOC728855	-178347,-1175
chr12:54776010-54777534	chr12	+	54776213	54777391	True	NM_015481,NM_001130968,NR_029894,NM_001130967	chr12,chr12,chr12,chr12	-,-,+,-	ZNF385A,ZNF385A,MIR148B,ZNF385A	1140,7742,-45264,7742
chr11:66083222-66083539	chr11	+	66083470	66083532	True	NM_020404,NM_153266	chr11,chr11	-,+	CD248,TMEM151A	1033,-24148
chr8:62626368-62626628	chr8	+	62626386	62626554	True	NM_004318,NM_001164756,NM_001164754,NM_001164755,NM_173519,NM_032466	chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,+,-	ASPH,ASPH,ASPH,ASPH,CLVS1,ASPH	695,695,695,695,-425912,695
chr9:116059674-116060311	chr9	+	116059790	116060152	True	NM_145051,NM_004697	chr9,chr9	-,+	RNF183,PRPF4	1218,-21867
chr19:32894642-32895701	chr19	+	32894648	32895409	True	NM_207325,NM_032139,NM_001172774	chr19,chr19,chr19	+,-,+	DPY19L3,ANKRD27,DPY19L3	1612,270743,1245
chr19:17972994-17973742	chr19	+	17973025	17973551	True	NM_000980,NM_000453,NR_001593,NM_000215,NR_000012	chr19,chr19,chr19,chr19,chr19	+,+,+,-,+	RPL18A,SLC5A5,RPL18AP3,JAK3,SNORA68	-2345,9230,-2349,-14184,-39
chr20:31443219-31444259	chr20	+	31443239	31443649	True	NM_012325,NM_053041	chr20,chr20	+,-	MAPRE1,COMMD7	-35591,-111425
chr4:2795899-2797230	chr4	+	2795899	2797253	True	NM_001122681,NM_024309	chr4,chr4	+,-	SH3BP2,TNIP2	-1200,-37796
chr4:170541112-170541316	chr4	+	170541200	170541356	True	NM_001199398,NM_001199399,NM_001829,NM_001199397,NM_012224,NM_173872,NM_001199400	chr4,chr4,chr4,chr4,chr4,chr4,chr4	-,-,+,-,-,+,-	NEK1,NEK1,CLCN3,NEK1,NEK1,CLCN3,NEK1	-7422,-7422,365,-7422,-7422,365,-7422
chr11:312461-313406	chr11	+	312647	313375	True	NM_006435,NM_021034,NM_003641	chr11,chr11,chr11	+,-,+	IFITM2,IFITM3,IFITM1	-4591,7589,615
chr17:74585238-74587207	chr17	+	74585439	74587001	True	NM_006456,NR_004395	chr17,chr17	-,+	ST6GALNAC2,SNORD1A	-3294,-27775
chr17:79677978-79678259	chr17	+	79678061	79678285	True	NM_001040025,NM_002949,NM_012140	chr17,chr17,chr17	-,+,+	ARL16,MRPL12,SLC25A10	-27107,-7712,1085
chr7:56020579-56021030	chr7	+	56020778	56021058	True	NM_015969,NM_207366	chr7,chr7	+,-	MRPS17,SEPT14	-1226,-90296
chr1:151173396-151174260	chr1	+	151173667	151173816	True	NM_001135637,NM_001135636,NM_003557,NM_005997,NM_001135638	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	PIP5K1A,PIP5K1A,PIP5K1A,VPS72,PIP5K1A	-2700,-2700,-2700,-11027,-2700
chr4:84027572-84029016	chr4	+	84027855	84028996	True	NM_016619,NM_001130716,NM_001130715,NM_016129	chr4,chr4,chr4,chr4	-,-,-,+	PLAC8,PLAC8,PLAC8,COPS4	6965,2066,6965,-71674
chr19:8428682-8428935	chr19	+	8428688	8428848	True	NM_139314,NM_001039667,NM_198471	chr19,chr19,chr19	+,+,-	ANGPTL4,ANGPTL4,KANK3	162,162,-20542
chr2:44590812-44592674	chr2	+	44591530	44592688	True	NM_024766,NM_001171617,NM_006036,NM_001042386,NM_001171603,NM_001042385,NM_001171606,NM_001171613	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-,-,-	CAMKMT,PREPL,PREPL,PREPL,PREPL,PREPL,PREPL,PREPL	-2538,-2529,-3717,-4642,-2529,-4642,-2830,-2830
chr6:116853562-116855107	chr6	+	116853610	116855102	True	NM_001139444,NM_153036	chr6,chr6	-,+	BET3L,FAM26D	11722,-3473
chr15:94841699-94843456	chr15	+	94841760	94843463	True	NM_001159643,NM_018349,NR_034095	chr15,chr15,chr15	+,+,-	MCTP2,MCTP2,LOC400456	-381,-381,1026916
chr4:42646249-42646675	chr4	+	42646329	42646647	True	NM_001080505,NM_001105529	chr4,chr4	+,-	SHISA3,ATP8A1	-246533,12529
chr12:57990190-57991900	chr12	+	57990540	57991558	True	NM_178502,NM_001146259,NM_001146258,NM_001478,NM_024779,NM_001146260	chr12,chr12,chr12,chr12,chr12,chr12	+,+,+,-,+,+	DTX3,PIP4K2C,PIP4K2C,B4GALNT1,PIP4K2C,PIP4K2C	7045,-5661,-5661,35477,-5661,-5661
chr12:56115629-56116023	chr12	+	56115781	56115916	True	NM_001780,NM_001144997,NR_037656,NR_037658,NM_001040034,NR_037655,NR_037657,NM_001487,NM_002905,NM_001199771	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,-,+,+,-,+,+,+,+,+	CD63,ITGA7,BLOC1S1,BLOC1S1-RDH5,CD63,BLOC1S1,BLOC1S1,BLOC1S1,RDH5,RDH5	7051,-9692,-5756,-6014,7051,-6014,-5756,-6014,-1681,-1681
chr6:139104733-139105921	chr6	+	139105301	139105437	True	NM_001128617,NM_015439	chr6,chr6	-,+	REPS1,CCDC28A	204025,-10703
chr7:156442886-156443998	chr7	+	156443009	156443760	True	NR_026865,NM_001184996,NM_001184997,NM_030936	chr7,chr7,chr7,chr7	-,+,+,+	C7orf13,RNF32,RNF32,RNF32	-9661,-9619,-7389,-9707
chr11:130171860-130172588	chr11	+	130172118	130172418	True	NM_014155,NM_021978	chr11,chr11	-,+	ZBTB44,ST14	12246,-142487
chr1:3687901-3688126	chr1	+	3687923	3688023	True	NR_033711,NM_001163724	chr1,chr1	-,+	KIAA0495,LOC388588	-23986,1328
chr17:62491010-62491985	chr17	+	62491336	62491830	True	NM_138363,NM_007215	chr17,chr17	+,-	CCDC45,POLG2	11327,1408
chr17:58210403-58211184	chr17	+	58210602	58211020	True	NM_000717,NR_027408	chr17,chr17	+,-	CA4,LOC653653	16281,-30322
chr15:68498383-68499144	chr15	+	68498453	68499039	True	NM_033429,NM_015322,NM_001031733	chr15,chr15,chr15	-,+,-	CALML4,FEM1B,CALML4	-5,71101,-5
chr17:58228522-58228746	chr17	+	58228579	58228717	True	NM_000717,NR_027408	chr17,chr17	+,-	CA4,LOC653653	-1328,-48299
chr15:89079924-89081805	chr15	+	89080341	89081838	True	NM_001144074,NR_031590,NM_176805,NR_026645,NM_017996	chr15,chr15,chr15,chr15,chr15	-,+,+,-,-	DET1,MIR1179,MRPS11,DET1,DET1	8124,69499,-69720,8124,8124
chr17:8186870-8187223	chr17	+	8186874	8187031	True	NM_201520,NM_001177802,NM_016492,NM_001177801	chr17,chr17,chr17,chr17	-,+,+,+	SLC25A35,RANGRF,RANGRF,RANGRF	11192,4937,4937,4937
chr8:99440211-99440466	chr8	+	99440258	99440504	True	NM_024759,NM_020697	chr8,chr8	-,+	NIPAL2,KCNS2	-133637,-1059
chr18:59162720-59163585	chr18	+	59162770	59163619	True	NM_031891,NM_173557	chr18,chr18	+,-	CDH20,RNF152	-5046,396735
chr1:115206650-115207433	chr1	+	115206865	115206962	True	NM_003176,NM_198459	chr1,chr1	+,-	SYCP1,DENND2C	190492,5821
chr1:112281276-112281722	chr1	+	112281294	112281636	True	NM_019099,NM_007204	chr1,chr1	-,+	C1orf183,DDX20	464,16553
chr15:72103312-72103777	chr15	+	72103443	72103719	True	NM_014249,NM_016346,NM_006901	chr15,chr15,chr15	+,+,-	NR2E3,NR2E3,MYO9A	-600,-600,306753
chr17:5405333-5405908	chr17	+	5405355	5405954	True	NM_001162371,NM_024039	chr17,chr17	-,+	LOC728392,MIS12	-1036,-15159
chr10:23479598-23480016	chr10	+	23479617	23480014	True	NM_153714,NM_178161	chr10,chr10	-,+	C10orf67,PTF1A	153808,1445
chr22:24348677-24350518	chr22	+	24348750	24349910	True	NM_001144931,NR_003081	chr22,chr22	+,-	LOC391322,GSTTP1	23206,-1492
chr5:179333540-179333910	chr5	+	179333542	179333868	True	NM_015043,NM_003900,NM_198868	chr5,chr5,chr5	-,+,-	TBC1D9B,SQSTM1,TBC1D9B	1038,-85751,1038
chr19:3538459-3538829	chr19	+	3538464	3538794	True	NM_001135580,NM_001042680	chr19,chr19	+,-	C19orf71,C19orf28	360,18827
chr3:62769230-62769762	chr3	+	62769229	62769802	True	NR_027104,NM_003716	chr3,chr3	+,-	LOC285401,CADPS	318561,91323
chr21:22398490-22399387	chr21	+	22398489	22399063	True	NM_004540,NR_024090	chr21,chr21	+,-	NCAM2,C21orf131	-27907,-223063
chrX:113293156-113293746	chrX	+	113293229	113293706	True	NM_000868,NM_000640	chrX,chrX	+,-	HTR2C,IL13RA2	524844,958552
chr2:85581432-85581634	chr2	+	85581452	85581678	True	NM_001135022,NM_001135023,NM_001135021,NM_032213,NM_017750	chr2,chr2,chr2,chr2,chr2	+,+,+,+,-	ELMOD3,ELMOD3,ELMOD3,ELMOD3,RETSAT	164,164,164,164,193
chr2:179345564-179346481	chr2	+	179345729	179346481	True	NM_019091,NM_001135212,NM_181342	chr2,chr2,chr2	+,-,-	PLEKHA3,FKBP7,FKBP7	-581,-2374,-2374
chr9:37035137-37035437	chr9	+	37035140	37035486	True	NM_016734,NR_036592	chr9,chr9	-,+	PAX5,LOC100506710	-664,44406
chr6:82957627-82957830	chr6	+	82957699	82957867	True	NM_006670,NM_015525	chr6,chr6	+,-	TPBG,IBTK	115055,-251
chr1:144340415-144340946	chr1	+	144340812	144340942	True	NR_024584,NM_001037675,NR_024510,NR_024511	chr1,chr1,chr1,chr1	-,+,-,-	LOC728875,NBPF9,LOC728855,LOC728855	863,274016,-39,-39
chr1:144340415-144340946	chr1	+	143744472	143744522	False	NR_033189,NR_027469,NR_027468	chr1,chr1,chr1	+,-,-	LOC100130000,LOC100286793,FLJ39739	-57393,115,-15
chr1:144340415-144340946	chr1	+	144521087	144521173	False	NR_024584,NM_001037675	chr1,chr1	-,+	LOC728875,NBPF9	882,93785
chr1:144340415-144340946	chr1	-	149576295	149576425	False	NM_001024599,NR_024510	chr1,chr1	-,+	HIST2H2BF,LOC728855	-177066,27
chr1:144340415-144340946	chr1	+	148176250	148176300	False	NM_001170755,NM_001164261	chr1,chr1	+,-	NBPF15,PPIAL4D	381887,26286
chr1:144340415-144340946	chr1	+	147932061	147932131	False	NM_001097616,NR_027468	chr1,chr1	+,-	GPR89C,FLJ39739	-506545,-81
chr11:2191990-2192575	chr11	+	2192080	2192196	True	NR_028044,NM_000207,NR_003512,NM_199293,NM_199292,NM_001185098,NM_001042376,NM_001185097,NM_000360	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,-,-,-,-,-,-,-,-	IGF2AS,INS,INS-IGF2,TH,TH,INS,INS-IGF2,INS,TH	-30373,-9641,-9641,889,889,-9641,-9641,-9641,889
chr1:52868658-52869333	chr1	+	52868665	52869334	True	NM_032864,NM_004153,NM_001190818,NM_001190819	chr1,chr1,chr1,chr1	+,-,-,-	PRPF38A,ORC1,ORC1,ORC1	884,872,872,872
chr6:24488050-24489495	chr6	+	24488169	24489496	True	NM_170740,NM_001503,NM_001080,NM_177483	chr6,chr6,chr6,chr6	+,-,+,-	ALDH5A1,GPLD1,ALDH5A1,GPLD1	5700,404,5700,353
chr4:3465422-3465894	chr4	+	3465447	3465891	True	NM_001164673,NM_002337,NM_173660	chr4,chr4,chr4	+,-,+	DOK7,LRPAP1,DOK7	-465,68383,-465
chr1:119962573-119963231	chr1	+	119962581	119963274	True	NM_000198,NR_036540,NM_001166120	chr1,chr1,chr1	+,-,+	HSD3B2,LOC644242,HSD3B2	-4889,178691,-5078
chr1:110016074-110017050	chr1	+	110016118	110016882	True	NM_001040709,NM_020703,NM_153340	chr1,chr1,chr1	+,-,+	SYPL2,AMIGO1,ATXN7L2	-7069,35517,9678
chr21:45587113-45588746	chr21	+	45587563	45588501	True	NM_198155,NM_015259	chr21,chr21	+,-	C21orf33,ICOSLG	-34120,72383
chr9:7799823-7800531	chr9	+	7799861	7800277	True	NM_033428,NM_015061	chr9,chr9	-,+	C9orf123,KDM4C	-62,-1042271
chr22:35514741-35515187	chr22	+	35514864	35515222	True	NM_001008494,NM_005368	chr22,chr22	+,-	ISX,MB	-52785,498212
chr8:145202647-145202921	chr8	+	145202658	145202782	True	NM_030974,NM_032450,NM_001099281,NM_001099280	chr8,chr8,chr8,chr8	-,+,+,+	SHARPIN,HEATR7A,HEATR7A,HEATR7A	-43518,136,136,136
chr8:145202647-145202921	chr8	+	145447866	145447990	False	NM_016458,NM_015201	chr8,chr8	+,-	FAM203A,BOP1	-10037,67180
chr5:172083708-172084536	chr5	+	172083893	172084315	True	NM_001142651,NM_004417	chr5,chr5	+,-	NEURL1B,DUSP1	-15669,113938
chr5:77045516-77046602	chr5	+	77045672	77046590	True	NM_003719,NM_004607	chr5,chr5	+,-	PDE8B,TBCA	-539024,25645
chr9:101464004-101464837	chr9	+	101464072	101464834	True	NM_024642,NM_005458	chr9,chr9	+,-	GALNT12,GABBR2	105146,6695
chr5:76119026-76119728	chr5	+	76119127	76119581	True	NM_005242,NM_004101	chr5,chr5	+,-	F2RL1,F2RL2	-4352,-199887
chrX:12156988-12157259	chrX	+	12157080	12157224	True	NM_006125,NM_014728	chrX,chrX	-,+	ARHGAP6,FRMPD4	-473259,-546
chr1:150248470-150249833	chr1	+	150248626	150249573	True	NM_016022,NM_024579,NM_001077628,NM_144697	chr1,chr1,chr1,chr1	-,+,-,+	APH1A,C1orf54,APH1A,C1orf51	-7094,-3497,-7094,5655
chr1:24468232-24468441	chr1	+	24468273	24468489	True	NM_021258,NR_027087	chr1,chr1	-,+	IL22RA1,LOC284632	1336,58240
chr21:41238222-41238468	chr21	+	41238264	41238516	True	NR_026543,NM_006198	chr21,chr21	-,+	C21orf88,PCP4	-253515,830
chr17:79631910-79632254	chr17	+	79631920	79632155	True	NM_002602,NM_199287,NM_001039842,NR_026872	chr17,chr17,chr17,chr17	-,+,-,-	PDE6G,CCDC137,C17orf90,PDE6G	-8313,1605,1514,-8313
chr1:240765129-240765970	chr1	+	240765335	240765860	True	NM_022469,NM_020066	chr1,chr1	-,+	GREM2,FMN2	9659,-510210
chrX:153769680-153770293	chrX	+	153769769	153770293	True	NM_003639,NM_001099856,NM_001099857,NM_001042351,NM_000402,NM_001145255	chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,-,-,+	IKBKG,IKBKG,IKBKG,G6PD,G6PD,IKBKG	5768,165,5268,5544,4990,5268
chr1:150245052-150245398	chr1	+	150245192	150245316	True	NM_016022,NM_024579,NM_001077628,NM_144697	chr1,chr1,chr1,chr1	-,+,-,+	APH1A,C1orf54,APH1A,C1orf51	-3660,-61,-3660,9912
chr8:118176598-118177886	chr8	+	118176925	118177811	True	NM_173851,NM_006265	chr8,chr8	+,-	SLC30A8,RAD21	-29639,-289820
chr19:58694439-58694651	chr19	+	58694491	58694649	True	NM_024620,NM_016325,NM_133502,NM_016324	chr19,chr19,chr19,chr19	-,+,+,+	ZNF329,ZNF274,ZNF274,ZNF274	-32343,-146,-146,-146
chr7:150548932-150549287	chr7	+	150548935	150549221	True	NM_001091,NM_014020	chr7,chr7	+,-	ABP1,TMEM176B	351,-50487
chr3:195447869-195448618	chr3	+	195448141	195448533	True	NM_001098516,NM_004532,NM_152673	chr3,chr3,chr3	+,-,+	MUC20,MUC4,MUC20	2564,90665,-439
chr3:195447869-195448618	chr3	+	195342424	195342474	False	NM_001647,NR_003265	chr3,chr3	-,+	APOD,SDHAP2	-31348,42435
chr6:53214209-53214753	chr6	+	53214242	53214655	True	NM_012347,NM_021814	chr6,chr6	+,-	FBXO9,ELOVL5	-278525,-300
chr9:117262586-117262795	chr9	+	117262597	117262811	True	NM_001083885,NM_004888,NM_001173425,NM_015404	chr9,chr9,chr9,chr9	-,+,-,-	DFNB31,ATP6V1G1,DFNB31,DFNB31	2738,87182,4979,4979
chr9:37485418-37485724	chr9	+	37485497	37485757	True	NM_022490,NM_014872	chr9,chr9	+,-	POLR1E,ZBTB5	187,-20090
chrX:47076857-47077133	chrX	+	47076877	47077093	True	NM_033018,NR_024235,NM_006201,NM_001170460	chrX,chrX,chrX,chrX	+,-,+,+	CDK16,NDUFB11,CDK16,CDK16	434,-72268,982,5323
chr12:69078287-69078646	chr12	+	69078292	69078448	True	NM_020401,NR_033335	chr12,chr12	+,-	NUP107,SNORA70G	2282,-57137
chr14:100775964-100776379	chr14	+	100776000	100776428	True	NM_001039355,NR_029906	chr14,chr14	-,+	SLC25A29,MIR345	-3140,-1855
chr6:53413938-53415059	chr6	+	53414085	53414800	True	NM_018214,NM_001498,NM_001197115	chr6,chr6,chr6	+,-,-	LRRC1,GCLC,GCLC	244977,-4158,-4158
chr17:1620045-1620617	chr17	+	1620278	1620610	True	NM_001163811,NR_028503,NR_028502,NR_028505,NR_028504,NM_001164407,NM_001163809,NM_001163673,NM_152348,NR_029494	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,-,-,-,+,+,+,-	WDR81,C17orf91,C17orf91,C17orf91,C17orf91,TLCD2,WDR81,WDR81,WDR81,MIR22	7223,-712,-712,-712,-712,-6616,7514,-512,-512,-2997
chr14:20114683-20115498	chr22	+	16383126	16383182	False	NM_001005239,NR_001591	chr22,chr22	-,+	OR11H1,psiTPTE22	66672,699618
chr14:20114683-20115498	chr14	+	20114839	20115542	True	NM_001197287,NM_172194	chr14,chr14	-,+	OR11H2,OR4Q3	66999,100044
chr12:29607023-29608235	chr12	+	29607071	29608238	True	NM_018099,NM_183378	chr12,chr12	+,-	FAR2,OVCH1	-230524,42432
chr17:76621420-76621985	chr17	+	76621668	76621984	True	NM_173628,NM_024419	chr17,chr17	-,+	DNAH17,PGS1	-48192,-246991
chr1:180194775-180195678	chr1	+	180194945	180195627	True	NR_037642,NM_033343	chr1,chr1	-,+	LOC100527964,LHX4	48239,3805
chr22:24398178-24399198	chr22	+	24398454	24398952	True	NR_003082,NM_012295,NM_001201429,NM_001199281	chr22,chr22,chr22,chr22	-,+,+,+	GSTTP2,CABIN1,CABIN1,CABIN1	2997,8812,8812,8867
chr22:24398178-24399198	chr22	+	24344203	24344705	False	NR_003081,NM_000854	chr22,chr22	-,+	GSTTP1,GSTT2	2603,-21947
chr1:54869805-54870104	chr1	+	54869805	54870102	True	NM_018070,NM_145716,NM_147161,NM_001009955	chr1,chr1,chr1,chr1	-,-,+,-	SSBP3,SSBP3,ACOT11,SSBP3	1927,1927,143704,2040
chr1:64942916-64943356	chr1	+	64942916	64943225	True	NM_002227,NM_020925	chr1,chr1	-,+	JAK1,CACHD1	489013,-6491
chr2:161350414-161350783	chr2	+	161350463	161350764	True	NM_002897,NM_133484,NM_016836	chr2,chr2,chr2	-,+,-	RBMS1,TANK,RBMS1	-145,642701,-145
chr10:121662331-121663606	chr10	+	121662443	121663653	True	NM_024834,NR_037771	chr10,chr10	-,+	MCMBP,SEC23IP	-30049,-10416
chr19:44126277-44126775	chr19	+	44126293	44126565	True	NM_001145641,NM_182498	chr19,chr19	+,-	SRRM5,ZNF428	-10095,-2279
chr16:84652256-84653529	chr16	+	84652541	84653251	True	NM_024731,NM_021149	chr16,chr16	+,-	KLHL36,COTL1	28879,-872
chr2:137790918-137791273	chr2	+	137790931	137791151	True	NM_001080427,NM_003467	chr2,chr2	+,-	THSD7B,CXCR4	-42520,-915206
chr22:36010853-36011477	chr22	+	36010872	36011473	True	NM_005368,NM_030641,NM_203378,NM_203377	chr22,chr22,chr22,chr22	-,+,-,-	MB,APOL6,MB,MB	1961,32950,2132,7978
chr11:89877576-89879440	chr11	+	89877965	89879250	True	NM_005467,NM_001144073	chr11,chr11	+,-	NAALAD2,CHORDC1	-10206,77339
chr2:231973476-231973841	chr2	+	231973475	231973879	True	NM_000867,NR_034059	chr2,chr2	-,+	HTR2B,PSMD1	15995,-51948
chr3:52829055-52829630	chr3	+	52829064	52829484	True	NM_003157,NM_002217	chr3,chr3	-,+	NEK4,ITIH3	-24099,-331
chr14:23564138-23564453	chr14	+	23564325	23564409	True	NM_001164815,NM_001164814,NM_017924,NM_014977	chr14,chr14,chr14,chr14	-,-,+,-	ACIN1,ACIN1,C14orf119,ACIN1	464,464,378,464
chr5:159446685-159447484	chr5	+	159447213	159447470	True	NM_003314,NM_052927	chr5,chr5	+,-	TTC1,PWWP2A	-11086,99035
chr7:72937757-72938167	chr7	+	72937921	72938004	True	NM_003508,NM_032408	chr7,chr7	+,-	FZD9,BAZ1B	-89863,-1306
chr5:39421072-39421877	chr5	+	39421227	39421835	True	NM_001343,NM_003999	chr5,chr5	-,+	DAB2,OSMR	3554,-575177
chr3:160121018-160121702	chr3	+	160121018	160121564	True	NR_029525,NM_001002800,NR_029663,NM_020800,NM_005496,NM_001190241	chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,-,+,-	MIR16-2,SMC4,MIR15B,IFT80,SMC4,IFT80	968,-3644,811,-3698,-2727,-3698
chr19:48867509-48867805	chr19	+	48867565	48867707	True	NM_018273,NM_012451	chr19,chr19	-,+	TMEM143,SYNGR4	-379,25
chr1:47131934-47133673	chr1	+	47132394	47133518	True	NM_022745,NM_001042546,NM_001145474	chr1,chr1,chr1	-,-,+	ATPAF1,ATPAF1,C1orf223	631,631,3981
chr9:133710104-133710399	chr9	+	133710178	133710328	True	NM_005157,NM_198180	chr9,chr9	+,-	ABL1,QRFP	502,58947
chr4:151504163-151504464	chr4	+	151504203	151504463	True	NM_006439,NM_001199282	chr4,chr4	+,-	MAB21L2,LRBA	-1177,432023
chr2:165478429-165479648	chr2	+	165478654	165479538	True	NM_001040142,NM_004490	chr2,chr2	+,-	SCN2A,GRB14	616373,-294
chr6:31801231-31802033	chr6_qbl_hap6	+	3095297	3095415	False	NM_001040437,NR_002745,NM_005527,NR_002742,NM_005346,NM_001040438	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,SNORD52,HSPA1B,C6orf48	936,1283,-18815,3093,-6194,936
chr6:31801231-31802033	chr6_dbb_hap3	+	3087225	3087343	False	NM_001040437,NR_002745,NM_005527,NR_002742,NM_005346,NM_001040438	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,SNORD52,HSPA1B,C6orf48	936,1283,-18803,3095,-6186,936
chr6:31801231-31802033	chr6	+	31801638	31801756	True	NM_001040437,NR_002745,NM_005527,NR_002742,NM_005346,NM_001040438	chr6,chr6,chr6,chr6,chr6,chr6	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,SNORD52,HSPA1B,C6orf48	936,1283,-18803,3096,-6186,936
chr6:31801231-31802033	chr6_apd_hap1	+	3116392	3116510	False	NM_001040437,NR_002745,NM_005527,NR_002742,NM_005346,NM_001040438	chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,SNORD52,HSPA1B,C6orf48	936,1283,-18796,3097,-6176,936
chr6:31801231-31802033	chr6_cox_hap2	+	3311214	3311332	False	NM_001040437,NR_002745,NM_005527,NR_002742,NM_005346,NM_001040438	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,SNORD52,HSPA1B,C6orf48	936,1283,-18799,3094,-6180,936
chr5:19920914-19921360	chr5	+	19921041	19921331	True	NM_001167667,NR_027027	chr5,chr5	-,+	CDH18,GUSBP1	67084,1538257
chr3:69061573-69061828	chr3	+	69061583	69061749	True	NM_006407,NM_173654	chr3,chr3	+,-	ARL6IP5,C3orf64	72340,1075
chr17:33519273-33519963	chr17	+	33519530	33519703	True	NM_173167,NM_152462	chr17,chr17	+,-	UNC45B,AMAC1	-44753,1766
chr17:1089724-1090546	chr17	+	1089763	1090475	True	NM_001164405,NM_021962,NM_001159746	chr17,chr17,chr17	+,-,-	BHLHA9,ABR,ABR	83382,-6632,191
chr2:31602773-31603184	chr2	+	31602812	31603156	True	NM_014600,NM_000379	chr2,chr2	+,-	EHD3,XDH	-145983,34505
chr14:23297032-23297356	chr14	+	23297187	23297247	True	NM_004995,NM_181304,NM_181305,NM_181306,NM_181307,NM_180982,NM_001126106,NM_178336	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,+,+,+,-,+	MMP14,MRPL52,MRPL52,MRPL52,MRPL52,MRPL52,SLC7A7,MRPL52	8545,1844,1844,1844,1844,1844,-8173,1844
chr11:45684313-45685111	chr11	+	45684476	45685101	True	NR_027134,NM_003654	chr11,chr11	+,-	DKFZp779M0652,CHST1	107881,2128
chr11:17187176-17188889	chr11	+	17187351	17188851	True	NM_002645,NM_005013	chr11,chr11	-,+	PIK3C2A,NUCB2	2553,109434
chr16:15595959-15597121	chr16	+	15595966	15596882	True	NM_001184998,NM_001142469	chr16,chr16	-,+	KIAA0430,C16orf45	140191,-24
chr3:48544241-48545438	chr3	+	48544375	48545430	True	NM_033629,NM_016479	chr3,chr3	+,-	TREX1,SHISA5	-37197,-2714
chr7:142983217-142984832	chr7	+	142983283	142984829	True	NM_032983,NM_032982,NM_153345,NM_014690	chr7,chr7,chr7,chr7	+,+,+,-	CASP2,CASP2,TMEM139,FAM131B	478,478,-1271,74394
chr21:31118877-31119874	chr21	+	31118976	31119834	True	NM_175611,NR_027021	chr21,chr21	-,+	GRIK1,GRIK1-AS1	192498,659
chr12:119617916-119618565	chr12	+	119617952	119618600	True	NR_024246,NM_014365	chr12,chr12	-,+	LOC144742,HSPB8	122635,-1416
chrX:129273689-129274303	chrX	+	129273748	129274326	True	NM_001130846,NM_004794	chrX,chrX	-,+	AIFM1,RAB33A	-1733,31446
chr11:64878811-64879078	chr11	+	64878822	64879078	True	NM_014205,NM_003273	chr11,chr11	-,+	ZNHIT2,TM7SF2	6142,262
chr14:104399382-104400969	chr14	+	104399558	104400834	True	NM_153046,NM_004894	chr14,chr14	+,-	TDRD9,C14orf2	-4792,-11655
chr8:58191696-58191967	chr8	+	58191746	58191980	True	NR_026772,NM_017813	chr8,chr8	+,-	C8orf71,IMPAD1	121,-285319
chr1:99470643-99470893	chr1	+	99470748	99470932	True	NM_001010861,NM_001037317,NR_033940	chr1,chr1,chr1	-,-,+	LPPR5,LPPR5,LOC100129620	-299,-299,-967
chr6:90012867-90013608	chr6	+	90012940	90013617	True	NM_014942,NM_002043	chr6,chr6	+,-	ANKRD6,GABRR2	129279,11400
chr19:45680480-45680872	chr19	+	45680845	45680925	True	NM_212550,NM_024108	chr19,chr19	+,-	BLOC1S3,TRAPPC6A	1077,618
chr11:1594276-1594506	chr11	+	1594276	1594446	True	NM_004420,NR_021489	chr11,chr11	-,+	DUSP8,LOC338651	-1126,-356
chr1:205291575-205292026	chr1	+	205291725	205291953	True	NM_014858,NM_030952	chr1,chr1	+,-	TMCC2,NUAK2	-94739,-842
chr6:10419715-10419978	chr6	+	10419779	10420017	True	NM_001032280,NM_003220,NM_001042425,NR_033910	chr6,chr6,chr6,chr6	-,-,-,+	TFAP2A,TFAP2A,TFAP2A,LOC100130275	-7172,-4309,4,-7279
chr6:54711736-54711990	chr6	+	54711782	54711910	True	NM_001010872,NM_001042406	chr6,chr6	+,-	FAM83B,HMGCLL1	-264,732152
chrX:49643282-49643737	chrX	+	49643318	49643768	True	NM_001145073,NR_026742	chrX,chrX	+,-	USP27X,LOC158572	701,241
chr14:32736968-32738734	chr3	+	44791567	44792543	False	NM_020242,NM_020696	chr3,chr3	+,-	KIF15,KIAA1143	10665,10683
chr14:32736968-32738734	chr14	+	32737253	32738767	True	NR_027263,NM_004274	chr14,chr14	-,+	C14orf128,AKAP6	-191348,59711
chr11:34531657-34533292	chr11	+	34531659	34533072	True	NM_001422,NM_001752,NM_198381	chr11,chr11,chr11	-,+,-	ELF5,CAT,ELF5	2308,-71245,324
chr1:42997682-42998527	chr1	+	42997905	42998433	True	NM_032257,NM_001080850	chr1,chr1	-,+	ZMYND12,CCDC30	-75967,2126
chr20:2443311-2443805	chr20	+	2443466	2443728	True	NR_003684,NM_003091,NM_080751,NM_198216	chr20,chr20,chr20,chr20	-,-,+,-	SNORD119,SNRPB,TMC2,SNRPB	15,7821,73524,7821
chr12:49181054-49181295	chr12	+	49181144	49181314	True	NM_000725,NM_020983,NM_015270	chr12,chr12,chr12	+,-,-	CACNB3,ADCY6,ADCY6	31197,1556,-3267
chr20:42142764-42143276	chr20	+	42143201	42143319	True	NM_032107,NM_001008901,NM_015478	chr20,chr20,chr20	+,-,+	L3MBTL1,GTSF1L,L3MBTL1	-6932,212373,-176
chr21:29912529-29913083	chr21	+	29912560	29913138	True	NM_013240,NR_026552,NR_026553	chr21,chr21,chr21	-,+,+	N6AMT1,NCRNA00161,NCRNA00161	344614,-971,-971
chr2:6120705-6121510	chr2	+	6120732	6121522	True	NM_207315,NR_026833	chr2,chr2	-,+	CMPK2,LOC400940	884464,587
chr1:159405461-159406427	chr1	+	159405480	159406394	True	NM_012351,NM_001004469	chr1,chr1	+,-	OR10J1,OR10J5	3117,99453
chr18:13219740-13220405	chr18	+	13219786	13220428	True	NM_002828,NM_181482,NM_181481	chr18,chr18,chr18	-,+,+	PTPN2,C18orf1,C18orf1	-335452,-1051,-1051
chr3:42626045-42626475	chr3	+	42626048	42626337	True	NM_032970,NM_004206,NM_016305,NM_001201584	chr3,chr3,chr3,chr3	-,-,+,-	SEC22C,SEC22C,SS18L2,SEC22C	-2528,-2528,5960,-2528
chr6:117719560-117720435	chr6	+	117720171	117720471	True	NM_173674,NM_002944	chr6,chr6	+,-	DCBLD1,ROS1	83348,26597
chr16:89766793-89767774	chr16	+	89766955	89767645	True	NR_036480,NM_152339	chr16,chr16	+,-	LOC100128881,SPATA2L	10618,526
chr7:27133332-27134096	chr7	+	27133375	27134022	True	NM_005522,NM_153620,NM_006735,NR_002795	chr7,chr7,chr7,chr7	-,-,-,+	HOXA1,HOXA1,HOXA2,HOXA11-AS1	1653,1653,8422,91004
chr7:134849197-134849631	chr7	+	134849219	134849371	True	NM_018295,NR_024186,NR_024185,NM_024033	chr7,chr7,chr7,chr7	+,-,-,-	TMEM140,C7orf49,C7orf49,C7orf49	-16504,6211,6211,6211
chr1:161545303-161546434	chr1	+	161545353	161546482	True	NM_201563,NM_001127596	chr1,chr1	+,-	FCGR2C,FCGR3A	4646,-24940
chr1:161545303-161546434	chr1	+	161627193	161628322	False	NM_004001,NM_001002273,NM_001190828,NM_001002274,NM_001002275,NM_000570,NR_002595	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-,-	FCGR2B,FCGR2B,FCGR2B,FCGR2B,FCGR2B,FCGR3B,RPL31P11	4582,4582,4582,4582,4582,-26035,26777
chr12:123718237-123719033	chr12	+	123718243	123718909	True	NM_001143905,NM_001194995,NM_022782,NM_152269	chr12,chr12,chr12,chr12	+,+,-,+	C12orf65,C12orf65,MPHOSPH9,C12orf65	-3,-266,-11802,-450
chr19:10449775-10450195	chr19	+	10449858	10450154	True	NM_002162,NM_133452,NM_003259	chr19,chr19,chr19	-,-,+	ICAM3,RAVER1,ICAM5	241,-5544,-49254
chr11:197012-197238	chr11	+	197027	197219	True	NM_053280,NM_001097610,NM_145651,NM_001098787	chr11,chr11,chr11,chr11	+,+,+,-	ODF3,LOC653486,SCGB1C1,BET1L	-317,-3998,-3998,10253
chr11:31838685-31839093	chr11	+	31838693	31839137	True	NM_001127612,NR_033971,NM_001604,NM_000280	chr11,chr11,chr11,chr11	-,+,-,-	PAX6,DKFZp686K1684,PAX6,PAX6	422,-630,-5814,-5814
chr19:7695141-7695785	chr19	+	7695246	7695816	True	NM_006949,NR_033242,NM_020196,NM_174895,NM_001127396,NM_001171155	chr19,chr19,chr19,chr19,chr19,chr19	+,+,-,-,+,+	STXBP2,LOC100131801,XAB2,PCP2,STXBP2,LOC100131801	6174,-627,-807,2804,6174,-627
chr19:43417894-43418706	chr19	+	43417959	43418731	True	NM_002782,NM_001031850,NR_036584	chr19,chr19,chr19	-,-,+	PSG6,PSG6,LOC100289650	3308,3362,-91995
chr19:2162514-2162887	chr19	+	2162696	2162824	True	NM_003938,NM_032482	chr19,chr19	-,+	AP3D1,DOT1L	-11140,1323
chr11:18745762-18746262	chr11	+	18745869	18746245	True	NM_153347,NM_173588	chr11,chr11	+,-	TMEM86A,IGSF22	-25569,1582
chr3:130612298-130612706	chr3	+	130612307	130612753	True	NM_001199185,NM_001199184,NM_001199183,NM_001199179,NM_001001485,NM_001001486,NM_001001487,NM_014065,NM_014382	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,+,+,+,-,+	ATP2C1,ATP2C1,ATP2C1,ATP2C1,ATP2C1,ATP2C1,ATP2C1,ASTE1,ATP2C1	538,151,151,81,105,680,680,132943,538
chr13:52158169-52158384	chr13	+	52158266	52158384	True	NM_052950,NM_001039938	chr13,chr13	+,-	WDFY2,INTS6	99,-130991
chr1:209826232-209827683	chr1	+	209826348	209827600	True	NM_001127641,NM_001017402,NM_015714,NM_000228	chr1,chr1,chr1,chr1	-,-,+,-	LAMB3,LAMB3,G0S2,LAMB3	-674,-1669,21069,-528
chr18:61638262-61638939	chr18	+	61638462	61638960	True	NM_198833,NR_027245,NM_002640,NM_001031848	chr18,chr18,chr18,chr18	+,-,+,+	SERPINB8,C18orf20,SERPINB8,SERPINB8	-1251,177350,-1251,-1251
chr12:5154168-5154371	chr12	+	5154279	5154411	True	NM_006422,NM_002234	chr12,chr12	-,+	AKAP3,KCNA5	-399936,-1245
chr3:197462754-197463156	chr3	+	197462832	197463096	True	NM_001011537,NM_014687	chr3,chr3	+,-	FYTTD1,KIAA0226	13327,727
chr6:39665617-39667217	chr6	+	39665617	39667241	True	NM_145027,NM_001201427	chr6,chr6	-,+	KIF6,DAAM2	25990,92917
chr22:30823247-30824774	chr22	+	30823546	30824684	True	NM_001017981,NM_001003704,NM_016498	chr22,chr22,chr22	-,+,+	RNF215,MTFP1,MTFP1	-40244,-1986,-1986
chr14:71375392-71375811	chr14	+	71375463	71375844	True	NM_014982,NM_033141	chr14,chr14	+,-	PCNX,MAP3K9	-1392,-99575
chr5:154202662-154202945	chr5	+	154202875	154202993	True	NM_004779,NM_032385	chr5,chr5	+,-	CNOT8,C5orf4	35204,27270
chr15:22082352-22082793	chr15	+	22082592	22082780	True	NR_015416,NM_207355	chr15,chr15	+,-	LOC727924,POTEB	195251,407
chr15:22082352-22082793	chr15	+	21071432	21071620	False	NM_207355,NR_027411	chr15,chr15	-,+	POTEB,GOLGA8C	407,-303809
chr6:27843857-27844648	chr6	+	27844014	27844102	True	NM_003546,NM_003511,NM_003533,NM_005322	chr6,chr6,chr6,chr6	-,+,-,-	HIST1H4L,HIST1H2AL,HIST1H3I,HIST1H1B	-2725,-10969,-3915,-8655
chr10:75530543-75531461	chr10	+	75530545	75531459	True	NR_026592,NM_003635,NM_173540	chr10,chr10,chr10	-,-,+	BMS1P4,NDST2,FUT11	-40273,40180,589
chr2:238499654-238501204	chr2	+	238499972	238501218	True	NM_015893,NM_022449,NR_033308	chr2,chr2,chr2	+,-,-	PRLH,RAB17,RAB17	-24806,-203,-203
chr7:143956119-143956484	chr7	+	143956124	143956406	True	NR_002158,NM_001005328,NR_002157	chr7,chr7,chr7	-,-,-	OR2A20P,OR2A7,OR2A9P	-7428,365,-7576
chr7:143956119-143956484	chr6	+	132021944	132022226	False	NM_030908,NM_005021,NM_001145659	chr6,chr6,chr6	-,+,-	OR2A4,ENPP3,CTAGE9	365,-63553,9981
chr7:30544152-30544404	chr7	+	30544228	30544392	True	NR_037669,NM_001199815,NM_001199817,NM_001199816,NM_024051,NM_002047	chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,+	GGCT,GGCT,GGCT,GGCT,GGCT,GARS	115,115,115,115,115,89788
chrX:129402614-129402850	chrX	+	129402663	129402849	True	NM_017666,NM_003951	chrX,chrX	-,+	ZNF280C,SLC25A14	123,71197
chr12:66696587-66697127	chr12	+	66696643	66697106	True	NM_016056,NM_033647	chr12,chr12	-,+	TMBIM4,HELB	-132836,-338
chr21:32933080-32933577	chr21	+	32933239	32933615	True	NM_000454,NM_003253	chr21,chr21	+,-	SOD1,TIAM1	98319,-1949
chr3:3222700-3222974	chr3	+	3222740	3222992	True	NM_001173482,NM_016302,NM_182916	chr3,chr3,chr3	-,-,+	CRBN,CRBN,TRNT1	-1339,-1339,-54191
chr3:121796981-121798657	chr3	+	121797022	121798695	True	NM_006889,NM_001199799	chr3,chr3	+,-	CD86,ILDR1	-324,-55895
chr11:5613123-5614002	chr11	+	5613147	5614037	True	NM_001003819,NM_001003818,NM_001005289,NM_001198645,NM_001198644,NM_058166	chr11,chr11,chr11,chr11,chr11,chr11	+,+,-,+,+,+	TRIM6-TRIM34,TRIM6,OR52H1,TRIM6,TRIM6,TRIM6	3827,3827,-46394,3827,3827,3293
chr6:72596136-72596355	chr6	+	72596146	72596238	True	NR_026807,NM_014989	chr6,chr6	-,+	C6orf155,RIMS1	-465698,411
chr22:23851813-23852856	chr22	+	23851959	23852893	True	NM_153615,NM_020070	chr22,chr22	+,-	RGL4,IGLL1	180154,69652
chr15:50482253-50484111	chr15	+	50482488	50483782	True	NM_003645,NM_001159629,NM_024837	chr15,chr15,chr15	+,+,-	SLC27A2,SLC27A2,ATP8B4	-8160,-8160,-71069
chr14:102552443-102552731	chr14	+	102552498	102552780	True	NM_181302,NM_005348	chr14,chr14	+,-	WDR20,HSP90AA1	53431,782
chr8:52690385-52690616	chr8	+	52690529	52690624	True	NM_144651,NM_005285	chr8,chr8	-,+	PXDNL,NPBWR1	31432,1161843
chrX:53453653-53455584	chrX	+	53453936	53455448	True	NM_001037811,NM_006306,NM_001031745,NM_004493,NM_144968	chrX,chrX,chrX,chrX,chrX	-,-,+,-,+	HSD17B10,SMC1A,RIBC1,HSD17B10,RIBC1	5925,-4318,-4105,5925,-4156
chr22:24381345-24381961	chr22	+	24381458	24381924	True	NM_001144931,NM_000853	chr22,chr22	+,-	LOC391322,GSTT1	-8392,2410
chr8:1777268-1777563	chr8	+	1777317	1777467	True	NM_014629,NR_033895	chr8,chr8	+,-	ARHGEF10,LOC286083	-5219,-526490
chr17:48845511-48846505	chr17	+	48845549	48846075	True	NR_024626,NM_016424	chr17,chr17	-,+	C17orf73,LUC7L3	-631,-48675
chr5:139781925-139782645	chr5	+	139782023	139782525	True	NM_024668,NM_017747,NM_020690,NM_017978,NM_001945,NM_001197030	chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,-,+	ANKHD1,ANKHD1,ANKHD1-EIF4EBP3,ANKHD1,HBEGF,ANKHD1	-675,-675,-675,-675,-55835,-675
chr3:127308394-127308605	chr3	+	127308554	127308630	True	NM_016372,NM_004526,NM_001136053,NM_001142646	chr3,chr3,chr3,chr3	-,+,-,-	TPRA1,MCM2,TPRA1,TPRA1	-9274,8622,916,988
chr15:85202499-85203165	chr15	+	85202557	85203178	True	NR_004859,NM_032856,NM_021077,NM_205858	chr15,chr15,chr15,chr15	+,-,-,-	SCAND2,WDR73,NMB,NMB	-27924,-5036,-755,-755
chr1:11742750-11743950	chr1	+	11742765	11743477	True	NM_198545,NM_001127325,NM_006341	chr1,chr1,chr1	+,-,-	C1orf187,MAD2L2,MAD2L2	8303,8251,-1494
chr7:74380108-74380464	chr7	+	74380177	74380506	True	NM_001025202,NM_001145063	chr7,chr7	-,+	STAG3L2,GATSL1	-73446,-1145
chr7:74380108-74380464	chr7	-	99868224	99868274	False	NR_028040,NM_001004351,NR_028039,NR_028038,NM_178831	chr7,chr7,chr7,chr7,chr7	-,+,-,-,-	GATS,SPDYE3,GATS,GATS,GATS	1631,37050,1631,1631,1631
chr7:74380108-74380464	chr7	+	72570419	72570748	False	NR_002206,NR_003664,NR_003580	chr7,chr7,chr7	+,-,+	GTF2IP1,SPDYE8P,LOC100093631	-1444,-70110,-1458
chr7:74380108-74380464	chr7	-	74651726	74652055	False	NR_002206,NM_001003795,NR_003580	chr7,chr7,chr7	-,+,-	GTF2IP1,GTF2IRD2B,LOC100093631	1440,-143430,1454
chr7:74380108-74380464	chr7	-	74865943	74866272	False	NM_001145064,NR_003664	chr7,chr7	-,+	GATSL2,SPDYE8P	1119,70260
chr17:41397812-41398976	chr17	+	41398159	41398213	True	NR_027412,NM_145041	chr17,chr17	-,+	LOC100130581,TMEM106A	68103,-34316
chr8:27953431-27955206	chr8	+	27953495	27955261	True	NM_018091,NM_001010906	chr8,chr8	+,-	ELP3,C8orf80	-2962,-12107
chr17:26851118-26851527	chr17	+	26851377	26851573	True	NM_005148,NM_003593	chr17,chr17	-,+	UNC119,FOXN1	28123,-469
chr10:27380636-27381639	chr10	+	27380969	27381684	True	NM_014915,NM_001172303	chr10,chr10	-,+	ANKRD26,MASTL	7803,62068
chr17:8026116-8026354	chr17	+	8026320	8026392	True	NM_001165967,NR_036201,NM_021628,NM_001165960,NM_032580	chr17,chr17,chr17,chr17,chr17	-,+,-,-,-	HES7,MIR4314,ALOXE3,ALOXE3,HES7	1068,-34997,-4460,-4086,1068
chr10:128207454-128208486	chr10	+	128207478	128208301	True	NM_001004298,NM_001380	chr10,chr10	-,+	C10orf90,DOCK1	1760,385721
chr17:20614617-20615676	chr17	+	20615103	20615470	True	NM_001190790,NM_001004306	chr17,chr17	+,-	CDRT15L2,CCDC144NL	-132117,184041
chr15:76207115-76207499	chr15	+	76207116	76207321	True	NR_003136,NR_037623	chr15,chr15	-,+	FBXO22OS,FBXO22	18211,-10969
chr15:25214569-25215446	chr15	+	25214661	25215345	True	NM_130838,NR_001293	chr15,chr15	-,+	UBE3A,SNORD107	435358,11795
chr3:130292969-130293267	chr3	+	130292968	130293286	True	NM_001102608,NM_014602	chr3,chr3	+,-	COL6A6,PIK3R4	-13848,172460
chr5:68632328-68633620	chr5	+	68632630	68633452	True	NM_176816,NM_133343	chr5,chr5	-,+	CCDC125,RAD17	-16220,31671
chr9:19050334-19050535	chr9	+	19050354	19050552	True	NM_006570,NR_003009	chr9,chr9	+,-	RRAGA,SCARNA8	-1033,13282
chr16:89988427-89988633	chr16	+	89988513	89988675	True	NM_002386,NM_145039,NM_001197181,NM_006086	chr16,chr16,chr16,chr16	+,-,+,+	MC1R,CENPBD1,TUBB3,TUBB3	-4278,50615,-148,1011
chrX:118370939-118371163	chrX	+	118371115	118371201	True	NM_006667,NM_020721	chrX,chrX	+,-	PGRMC1,KIAA1210	-955,-86573
chr19:472622-474392	chr19	+	472651	474437	True	NM_182577,NM_130760	chr19,chr19	-,+	ODF3L2,MADCAM1	596,22052
chr20:40239291-40240368	chr20	+	40239489	40240129	True	NM_032221,NM_022896	chr20,chr20	-,+	CHD6,LPIN3	7054,-269986
chr9:73437845-73439635	chr9	+	73438258	73439216	True	NR_029621,NM_015110	chr9,chr9	-,+	MIR204,SMC5	-13258,-564432
chr11:119249610-119249823	chr11	+	119249646	119249873	True	NM_004205,NR_034160	chr11,chr11	-,+	USP2,LOC100499227	2614,2614
chrX:23015129-23016907	chrX	+	23015368	23016664	True	NM_182699,NM_001033583	chrX,chrX	+,-	DDX53,ACOT9	1422,744795
chr2:6637934-6638364	chr2	+	6637946	6638399	True	NM_207315,NM_080657	chr2,chr2	-,+	CMPK2,RSAD2	367588,379396
chr22:29831543-29832518	chr22	+	29831542	29832121	True	NR_002727,NM_021026	chr22,chr22	-,+	RFPL1S,RFPL1	6048,2450
chr19:7796260-7796511	chr19	+	7796306	7796436	True	NM_198492,NM_001144904	chr19,chr19	-,+	CLEC4G,CLEC4M	671,31598
chr10:111286649-111287445	chr10	+	111286884	111287484	True	NM_019903,NM_001167604	chr10,chr10	+,-	ADD3,XPNPEP1	478241,395879
chr22:35797500-35797830	chr22	+	35797523	35797793	True	NM_005368,NM_006739	chr22,chr22	-,+	MB,MCM5	215641,-1458
chr6:28240022-28241634	chr6	+	28240174	28240806	True	NM_032507,NM_001111039,NM_019110,NM_001184743,NM_001023560,NM_152736	chr6,chr6,chr6,chr6,chr6,chr6	+,+,-,+,+,+	PGBD1,ZNF187,ZKSCAN4,PGBD1,ZNF187,ZNF187	8507,-5437,-20172,8507,-5437,-5437
chr8:42753097-42753913	chr8	+	42753113	42753792	True	NM_001160223,NM_001160224,NM_032410,NM_030954,NM_001160225,NR_027669,NR_027668	chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,+,-,-,-,-	RNF170,RNF170,HOOK3,RNF170,RNF170,RNF170,RNF170	-1247,-1247,-1131,-1247,-1247,-1247,-1247
chr7:44106696-44107161	chr7	+	44106718	44107196	True	NM_000290,NM_014063	chr7,chr7	-,+	PGAM2,DBNL	-1532,-22530
chr11:442455-442953	chr11	+	442517	442933	True	NM_030783,NM_001012302	chr11,chr11	+,-	PTDSS2,ANO9	7346,-506
chr9:34637839-34638079	chr9	+	34637954	34638116	True	NM_147157,NM_005866,NM_000155,NM_001017363	chr9,chr9,chr9,chr9	-,-,+,-	SIGMAR1,SIGMAR1,GALT,ARID3C	-186,-186,8518,-9943
chr6:28547938-28548671	chr6	+	28548289	28548691	True	NM_052923,NM_003996	chr6,chr6	-,+	SCAND3,GPX5	6471,-54554
chr6:28547938-28548671	chr6_cox_hap2	+	70493	70895	False	NM_052923,NM_003996	chr6_cox_hap2,chr6_cox_hap2	-,+	SCAND3,GPX5	6471,-54554
chr13:49761785-49763560	chr13	+	49761831	49762991	True	NM_030925,NM_001507	chr13,chr13	-,+	CAB39L,MLNR	212801,31482
chr15:74174519-74174964	chr15	+	74174562	74175010	True	NM_004809,NM_153356	chr15,chr15	-,+	STOML1,TBC1D21	109675,-8648
chr20:62150703-62151044	chr20	+	62150734	62151092	True	NM_024299,NM_005975	chr20,chr20	+,-	PPDPF,PTK6	1040,17665
chr15:64113473-64114355	chr15	+	64113967	64114393	True	NM_003922,NM_203373	chr15,chr15	-,+	HERC1,FBXL22	11804,-224468
chr11:313753-314084	chr11	+	313826	314128	True	NM_006435,NM_021034,NM_003641	chr11,chr11,chr11	+,-,+	IFITM2,IFITM3,IFITM1	-5770,6836,-2
chr1:222798640-222799647	chr1	+	222798956	222799684	True	NM_198551,NM_005681	chr1,chr1	+,-	MIA3,TAF1A	-7563,-35681
chr1:41581763-41583027	chr1	+	41581782	41582711	True	NR_037868,NM_001172222	chr1,chr1	+,-	LOC100507178,SCMH1	-101571,42944
chr7:129990872-129992197	chr7	+	129990967	129991993	True	NM_001127442,NM_001127441,NM_080385,NM_018718	chr7,chr7,chr7,chr7	+,+,+,-	CPA5,CPA5,CPA5,TSGA14	-6388,-6388,-6388,88911
chr4:111119891-111120127	chr4	+	111120049	111120171	True	NM_001130721,NM_024090,NM_001977	chr4,chr4,chr4	-,-,+	ELOVL6,ELOVL6,ENPEP	-278,-229,277057
chr19:12790631-12791438	chr19	+	12790649	12791181	True	NM_013407,NM_032332,NM_001930,NM_013406	chr19,chr19,chr19,chr19	-,+,-,-	DHPS,WDR83,DHPS,DHPS	1546,-10183,1546,1546
chr5:6446900-6447233	chr5	+	6447000	6447268	True	NM_001145161,NM_032286	chr5,chr5	+,-	UBE2QL1,MED10	1467,-68361
chr16:55355957-55357181	chr16	+	55356015	55357163	True	NR_034105,NM_024335	chr16,chr16	-,+	CRNDE,IRX6	-392936,1307
chr8:22928659-22929102	chr8	+	22928856	22929078	True	NM_003842,NM_147187,NR_027140,NM_003841	chr8,chr8,chr8,chr8	-,-,-,+	TNFRSF10B,TNFRSF10B,TNFRSF10B,TNFRSF10C	-2156,-2156,-2156,31248
chr11:74457419-74457895	chr11	+	74457589	74457937	True	NM_015424,NM_001098638	chr11,chr11	-,+	CHRDL2,RNF169	-15403,1975
chr20:34194042-34195371	chr20	+	34194046	34195419	True	NR_024377,NM_003116	chr20,chr20	-,+	FER1L4,SPAG4	115,8389
chr15:90457859-90459060	chr15	+	90457859	90458584	True	NM_182616,NM_198526,NM_001199058	chr15,chr15,chr15	-,+,-	C15orf38,ZNF710,C15orf38-AP3S2	-1637,86167,-1637
chr9:115142740-115143362	chr9	+	115142754	115143377	True	NM_032303,NR_036085,NM_001195822,NR_036651	chr9,chr9,chr9,chr9	+,-,+,+	HSDL2,MIR3134,HSDL2,HSDL2	-616,-30209,-616,-616
chr1:150292855-150293261	chr1	+	150293120	150293310	True	NM_004698,NM_016022	chr1,chr1	+,-	PRPF3,APH1A	617,-51588
chr9:27505286-27506687	chr9	+	27505391	27506385	True	NM_024761,NM_020124	chr9,chr9	-,+	MOBKL2B,IFNK	23515,17926
chr12:123382377-123382732	chr12	+	123382721	123382782	True	NM_003959,NM_024667	chr12,chr12	+,-	HIP1R,VPS37B	-62733,-2009
chr19:55836169-55836638	chr19	+	55836240	55836682	True	NM_001085488,NM_032701	chr19,chr19	-,+	TMEM150B,SUV420H2	76,14538
chr13:19669036-19670866	chr13	+	19669160	19670355	True	NR_002801,NR_026852	chr13,chr13	-,+	PHF2P1,LOC348021	22119,-86813
chr11:695098-695442	chr11	+	695145	695395	True	NM_174940,NM_001042463,NM_021008	chr11,chr11,chr11	+,+,-	TMEM80,TMEM80,DEAF1	220,220,395
chr10:88125259-88125470	chr10	+	88125309	88125519	True	NM_017551,NM_001030015	chr10,chr10	-,+	GRID1,OPN4	781,288794
chr2:207617241-207618829	chr2	+	207617320	207618547	True	NM_001039845,NM_001136193	chr2,chr2	-,+	MDH1B,FASTKD2	11553,11564
chr12:65003100-65003836	chr12	+	65003104	65003624	True	NR_037515,NM_178169	chr12,chr12	-,+	MIR548Z,RASSF3	12813,668
chr1:156589640-156591315	chr1	+	156589646	156590884	True	NM_182679,NM_021817	chr1,chr1	-,+	GPATCH4,HAPLN2	-18367,-612
chr16:2796112-2796397	chr16	+	2796112	2796314	True	NM_016333,NR_027274,NR_027275	chr16,chr16,chr16	+,-,-	SRRM2,LOC100128788,LOC100128788	6015,-1314,6337
chr2:237991504-237991885	chr2	+	237991585	237991921	True	NM_004369,NM_006710,NM_198189	chr2,chr2,chr2	-,+,+	COL6A3,COPS8,COPS8	330979,2162,2162
chr12:6517240-6517499	chr12	+	6517245	6517421	True	NM_002342,NM_001159575	chr12,chr12	+,-	LTBR,SCNN1A	-23946,-30722
chr2:136590718-136591175	chr2	+	136590722	136591016	True	NM_002299,NM_014607	chr2,chr2	-,+	LCT,UBXN4	3790,-91584
chr17:73452829-73453261	chr17	+	73452976	73453266	True	NM_014738,NM_203506	chr17,chr17	+,-	KIAA0195,GRB2	-363,-51186
chr20:44187577-44189028	chr20	+	44187710	44189055	True	NM_020398,NM_080753	chr20,chr20	-,+	SPINLW1,WFDC10A	-11645,69329
chr11:61277858-61278534	chr11	+	61278081	61278539	True	NM_001145077,NM_004200	chr11,chr11	+,-	LRRC10B,SYT7	-1860,69809
chr10:97470016-97471776	chr10	+	97470488	97471708	True	NM_001143973,NM_001098175	chr10,chr10	-,+	TCTN3,ENTPD1	-16588,-173
chr9:75140023-75140758	chr9	+	75140166	75140528	True	NM_138691,NM_006007	chr9,chr9	+,-	TMC1,ZFAND5	-3501,-160003
chr20:46608493-46608937	chr20	+	46608573	46608985	True	NR_026958,NM_198596	chr20,chr20	+,-	LOC284749,SULF2	379668,-193213
chr12:59717290-59718043	chr12	+	59717520	59718037	True	NM_004731,NM_153377	chr12,chr12	+,-	SLC16A7,LRIG3	365088,-403258
chr17:7518566-7518838	chr17	+	7518572	7518842	True	NR_027463,NM_004860	chr17,chr17	+,-	SHBG,FXR2	-1241,-357
chr6:33043847-33044868	chr6	+	33044121	33044193	True	NM_033554,NM_002121	chr6,chr6	-,+	HLA-DPA1,HLA-DPB1	-2743,-412
chr6:33043847-33044868	chr6_apd_hap1	+	4330922	4331000	False	NM_002121	chr6_apd_hap1	+	HLA-DPB1	-418
chr6:33043847-33044868	chr6_mann_hap4	+	4501661	4501739	False	NM_033554,NM_002121	chr6_mann_hap4,chr6_mann_hap4	-,+	HLA-DPA1,HLA-DPB1	-2743,-418
chr6:33043847-33044868	chr6_dbb_hap3	+	4325460	4325532	False	NM_033554,NM_002121	chr6_dbb_hap3,chr6_dbb_hap3	-,+	HLA-DPA1,HLA-DPB1	-2743,-412
chr6:33043847-33044868	chr6_mcf_hap5	+	4380976	4381054	False	NM_033554,NM_002121	chr6_mcf_hap5,chr6_mcf_hap5	-,+	HLA-DPA1,HLA-DPB1	-2743,-418
chr6:33043847-33044868	chr6_ssto_hap7	+	4524625	4524697	False	NM_033554,NM_002121	chr6_ssto_hap7,chr6_ssto_hap7	-,+	HLA-DPA1,HLA-DPB1	-2743,-412
chr6:33043847-33044868	chr6_qbl_hap6	+	4276572	4276650	False	NM_033554,NM_002121	chr6_qbl_hap6,chr6_qbl_hap6	-,+	HLA-DPA1,HLA-DPB1	-2743,-418
chr6:33043847-33044868	chr6_cox_hap2	+	4488301	4488373	False	NM_033554,NM_002121	chr6_cox_hap2,chr6_cox_hap2	-,+	HLA-DPA1,HLA-DPB1	-2743,-412
chr12:109828753-109830243	chr12	+	109828757	109830207	True	NM_213596,NM_001101421	chr12,chr12	-,+	FOXN4,MYO1H	-81732,-2284
chr2:203497259-203498017	chr2	+	203497452	203497920	True	NM_178231,NM_173511	chr2,chr2	-,+	ICA1L,FAM117B	238331,1980
chr12:104457856-104458115	chr12	+	104457910	104458114	True	NM_031302,NM_013320	chr12,chr12	-,+	GLT8D2,HCFC2	-13995,121
chr20:43582921-43583421	chr20	+	43582949	43583382	True	NM_006809,NM_006282	chr20,chr20	-,+	TOMM34,STK4	5783,11737
chr6:26220467-26221378	chr6	+	26220510	26221361	True	NM_003532,NM_003518,NM_021052	chr6,chr6,chr6	+,-,+	HIST1H3E,HIST1H2BG,HIST1H2AE	4021,-3638,-3420
chr3:138325254-138326312	chr3	+	138325541	138326006	True	NM_001033030,NM_001033031,NM_001033032,NM_024491,NM_018147	chr3,chr3,chr3,chr3,chr3	+,+,+,-,+	FAIM,FAIM,FAIM,CEP70,FAIM	1535,1535,1535,-12412,1912
chr1:45967987-45968467	chr1	+	45968277	45968365	True	NR_033297,NR_033296,NR_033298,NM_015506	chr1,chr1,chr1,chr1	-,-,-,+	CCDC163P,CCDC163P,CCDC163P,MMACHC	-2526,-2526,-2526,-2472
chr19:15220159-15220561	chr19	+	15220237	15220521	True	NM_006844,NM_033025	chr19,chr19	-,+	ILVBL,SYDE1	16106,-2074
chr11:46298072-46298554	chr11	+	46298133	46298509	True	NM_000741,NM_052854	chr11,chr11	-,+	CHRM4,CREB3L1	109648,718
chr10:89419088-89419378	chr10	+	89419138	89419258	True	NM_001015880,NM_004670,NM_032810	chr10,chr10,chr10	+,+,-	PAPSS2,PAPSS2,ATAD1	217,217,158709
chr2:223163938-223164633	chr2	+	223164149	223164681	True	NM_013942,NM_153038,NM_181461,NM_001127366,NM_181460,NM_181457,NM_000438,NM_181458,NM_181459	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	-,+,-,-,-,-,-,-,-	PAX3,CCDC140,PAX3,PAX3,PAX3,PAX3,PAX3,PAX3,PAX3	-434,-1334,-434,-434,-434,-434,-434,-434,-434
chr2:28616702-28617428	chr2	+	28616771	28617232	True	NM_017910,NM_005253	chr2,chr2	-,+	TRMT61B,FOSL2	475993,-1043
chr2:219647409-219647699	chr2	+	219647461	219647661	True	NM_000784,NM_017431	chr2,chr2	+,-	CYP27A1,PRKAG3	-1042,48901
chr13:114999290-115000147	chr13	+	114999397	114999732	True	NM_001078645,NM_003903,NM_007368	chr13,chr13,chr13	+,+,-	CDC16,CDC16,RASA3	629,629,-101302
chr17:17496095-17496657	chr17	+	17496385	17496639	True	NM_030665,NM_148172	chr17,chr17	+,-	RAI1,PEMT	88147,-1391
chr17:37124641-37125319	chr17	+	37124695	37124924	True	NR_033753,NM_001008777	chr17,chr17	+,-	FLJ43826,FBXO47	61234,-1040
chr2:44005450-44006252	chr2	+	44005585	44006093	True	NM_015522,NM_022436,NM_001193464,NM_016008	chr2,chr2,chr2,chr2	+,-,+,+	DYNC2LI1,ABCG5,DYNC2LI1,DYNC2LI1	-4471,59921,-4471,-4471
chr22:25201678-25202095	chr22	+	25201761	25201831	True	NM_001098498,NM_001008496,NM_001098497,NM_001039948,NM_133454	chr22,chr22,chr22,chr22,chr22	+,-,+,+,+	SGSM1,PIWIL3,SGSM1,SGSM1,SGSM1	304,-31078,304,304,304
chr6:137366084-137366284	chr6	+	137366088	137366332	True	NM_014432,NM_001008783	chr6,chr6	-,+	IL20RA,SLC35D3	16,-122737
chr4:47914934-47915699	chr4	+	47915058	47915737	True	NM_152995,NM_207330	chr4,chr4	-,+	NFXL1,NIPAL1	946,103053
chr15:64651014-64652012	chr15	+	64651173	64651618	True	NM_022048,NM_016213	chr15,chr15	-,+	CSNK1G1,TRIP4	-2731,28384
chr15:40696380-40697149	chr15	+	40696514	40697041	True	NM_207380,NM_002225,NM_001159508	chr15,chr15,chr15	-,+,+	C15orf52,IVD,IVD	-63346,644,644
chr3:130115797-130116757	chr3	+	130116079	130116718	True	NR_024252,NR_022012	chr3,chr3	-,+	LOC729375,COL6A5	-285803,-51784
chr22:39075530-39076712	chr22	+	39075745	39076723	True	NM_014876,NM_020243	chr22,chr22	-,+	JOSD1,TOMM22	19786,1230
chr1:155233809-155234028	chr7	+	23624955	23625005	True	NM_138771,NR_002711	chr7,chr7	+,-	CCDC126,CLK2P	11992,1191
chr14:105551956-105552481	chr14	+	105552142	105552444	True	NM_174891,NM_013345	chr14,chr14	+,-	C14orf79,GPR132	-99577,-20388
chr12:1702153-1702657	chr12	+	1702188	1702620	True	NM_030775,NM_152441	chr12,chr12	+,-	WNT5B,FBXL14	23601,761
chr22:36876223-36876734	chr22	+	36876238	36876740	True	NM_012473,NM_145343	chr22,chr22	-,+	TXN2,APOL1	997,-227172
chr15:42067502-42069393	chr15	+	42067507	42069205	True	NR_036195,NM_014994,NM_001128608	chr15,chr15,chr15	-,+,+	MIR4310,MAPKBP1,MAPKBP1	89602,-926,-926
chr22:43743900-43745113	chr22	+	43743906	43745126	True	NM_173050,NM_001044370	chr22,chr22	-,+	SCUBE1,MPPED1	-4551,62893
chr6:6006388-6006705	chr6	+	6006446	6006750	True	NM_016588,NM_004271	chr6,chr6	-,+	NRN1,LY86	933,582183
chr4:174450948-174451296	chr4	+	174451025	174451277	True	NM_021973,NR_003679	chr4,chr4	-,+	HAND2,NBLA00301	151,331
chr12:118538156-118539475	chr12	+	118538649	118539394	True	NM_002567,NM_019086	chr12,chr12	+,-	PEBP1,VSIG10	34475,2475
chr12:10876987-10878036	chr12	+	10877066	10878073	True	NM_003651,NM_001145426,NM_005042	chr12,chr12,chr12	-,-,+	CSDA,CSDA,PRH2	-1113,-1113,203760
chr15:83653459-83654640	chr15	+	83653892	83654552	True	NM_031452,NM_001160116	chr15,chr15	+,-	FAM103A1,C15orf40	442,25891
chr7:98246888-98247131	chr7	+	98246900	98247180	True	NM_002523,NM_018842	chr7,chr7	+,-	NPTX2,BAIAP2L1	-354,-216473
chr4:81204194-81205215	chr4	+	81204193	81205228	True	NM_001145794,NM_033143	chr4,chr4	-,+	ANTXR2,FGF5	-209716,-16509
chr3:52027884-52029680	chr3	+	52028223	52029630	True	NM_000992,NM_001198898	chr3,chr3	-,+	RPL29,ACY1	378,-10982
chr19:51959315-51960849	chr19	+	51959573	51960757	True	NM_001080405,NM_014442	chr19,chr19	+,-	CEACAM18,SIGLEC8	19080,1001
chr16:85223676-85225261	chr16	+	85223688	85225238	True	NR_033984,NM_198491	chr16,chr16	+,-	LOC400548,FAM92B	-52983,-77574
chr11:128455956-128456696	chr11	+	128456066	128456734	True	NM_001167681,NM_001143820	chr11,chr11	+,-	FLI1,ETS1	107076,769
chr16:11348937-11349140	chr16	+	11348943	11349181	True	NM_003745,NM_152308	chr16,chr16	-,+	SOCS1,C16orf75	908,90129
chr11:63583330-63584427	chr11	+	63583764	63584280	True	NM_138471,NM_001144936	chr11,chr11	+,-	C11orf84,C11orf95	-2893,-47651
chr11:64323499-64324127	chr11	+	64323556	64324172	True	NM_018484,NM_138734	chr11,chr11	+,-	SLC22A11,NRXN2	-509,86665
chr6:126293014-126293892	chr6	+	126293311	126293737	True	NM_016063,NM_001031712	chr6,chr6	-,+	HDDC2,TRMT11	-670029,13838
chr10:52753371-52754237	chr10	+	52753507	52754027	True	NM_138933,NM_001098512	chr10,chr10	-,+	A1CF,PRKG1	-108072,-2613
chr22:38205187-38206681	chr22	+	38205187	38206349	True	NM_138797,NM_014291,NM_005318,NM_001171690	chr22,chr22,chr22,chr22	-,+,+,+	ANKRD54,GCAT,H1F0,GCAT	34054,-1326,-4124,-1326
chr10:79491066-79491618	chr10	+	79491080	79491665	True	NR_024585,NM_002247	chr10,chr10	+,-	LOC100128292,KCNMA1	194904,-93503
chr20:12363517-12364146	chr20	+	12363586	12364008	True	NM_017714,NM_014962	chr20,chr20	-,+	TASP1,BTBD3	1255625,-465077
chr1:115296700-115298020	chr1	+	115296927	115298065	True	NM_007158,NM_003176,NM_001007553,NM_001130523	chr1,chr1,chr1,chr1	-,+,-,-	CSDE1,SYCP1,CSDE1,CSDE1	2609,99389,2609,2656
chr1:16135969-16137459	chr1	+	16136447	16137389	True	NM_001089591,NM_015001	chr1,chr1	-,+	UQCRHL,SPEN	-2253,36969
chr4:164419732-164421656	chr4	+	164420045	164421295	True	NM_032136,NM_018352	chr4,chr4	-,+	TKTL2,C4orf43	-24998,-4424
chr1:149223651-149223918	chr1	+	149223755	149223919	True	NM_001024599,NR_027002	chr1,chr1	-,+	HIST2H2BF,LOC388692	175360,55556
chr2:55746334-55746737	chr2	+	55746537	55746776	True	NM_080667,NM_001122964	chr2,chr2	+,-	CCDC104,SMEK2	-37,98070
chr3:47620446-47620658	chr3	+	47620540	47620614	True	NM_006574,NM_015466	chr3,chr3	-,+	CSPG5,PTPN23	-181,-198100
chr11:46613126-46613654	chr11	+	46613424	46613495	True	NM_017749,NM_001205120	chr11,chr11	-,+	AMBRA1,ATG13	-510,25330
chr9:130160387-130161232	chr9	+	130160389	130161133	True	NM_014580,NR_002449	chr9,chr9	+,-	SLC2A8,SNORA65	-975,49833
chr16:18804526-18805499	chr16	+	18804532	18805260	True	NM_001030009,NM_001019,NM_015161,NM_024847	chr16,chr16,chr16,chr16	-,-,-,+	RPS15A,RPS15A,ARL6IP1,TMC7	-2876,-2876,7647,189995
chr5:140783236-140783645	chr5	+	140783235	140783701	True	NM_018925,NM_032090,NM_032100,NM_018921,NM_032099,NM_032089,NM_018926,NM_005642,NM_018913	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,+,-,+	PCDHGB5,PCDHGA10,PCDHGB6,PCDHGA9,PCDHGB5,PCDHGA9,PCDHGB6,TAF7,PCDHGA10	-5591,9041,4068,-766,-5591,-766,4068,-82884,9041
chr17:49245689-49247416	chr17	+	49245795	49247278	True	NM_001198682,NM_002512,NM_003971,NM_001018137,NM_001018138,NM_001018139	chr17,chr17,chr17,chr17,chr17,chr17	+,+,-,+,+,+	NME2,NME2,SPAG9,NME2,NME2,NME2	-2213,-2213,-47569,-3050,-1763,-1984
chr14:21355181-21356920	chr14	+	21355281	21356960	True	NM_002935,NM_198235	chr14,chr14	+,-	RNASE3,RNASE1	2601,-84245
chr22:37217436-37218326	chr22	+	37217512	37218272	True	NM_000631,NM_002854	chr22,chr22	+,-	NCF4,PVALB	38757,-1995
chr20:3143215-3144030	chr20	+	3143233	3144003	True	NM_014731,NM_014948,NM_199415,NM_021826,NM_033453	chr20,chr20,chr20,chr20,chr20	-,-,-,-,+	ProSAPiP1,UBOX5,UBOX5,FASTKD5,ITPA	5254,-2693,-2693,-2701,46052
chr9:47167838-47168122	chr9	+	47167906	47168060	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-3537176,-480391
chr9:47167838-47168122	chr9	-	67681473	67681551	False	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	112688,245209
chr9:47167838-47168122	chr9	-	46272556	46272634	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2641826,414931
chr9:47167838-47168122	chr9	+	45110685	45110839	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-120500,-1479955
chr11:67778865-67779329	chr11	+	67778886	67779332	True	NM_001161473,NM_030930,NM_000694,NM_001030010	chr11,chr11,chr11,chr11	+,-,+,+	ALDH3B1,UNC93B1,ALDH3B1,ALDH3B1	-2889,-7293,-1147,-1147
chr4:7045718-7046438	chr4	+	7045718	7046430	True	NM_153376,NM_152293,NR_033828	chr4,chr4,chr4	-,+,-	CCDC96,TADA2B,LOC100129931	-990,-613,1578
chr1:22265856-22267585	chr1	+	22265895	22267254	True	NM_005529,NM_007352	chr1,chr1	-,+	HSPG2,CELA3B	-2145,36163
chr17:35851131-35851457	chr17	+	35851168	35851448	True	NM_198839,NM_007026	chr17,chr17	-,+	ACACA,DUSP14	-84266,-1269
chr10:61470357-61471959	chr10	+	61470479	61471988	True	NM_194298,NM_001143774	chr10,chr10	-,+	SLC16A9,PHYHIPL	-830,-533303
chr2:242257166-242258206	chr2	+	242257166	242257905	True	NM_005336,NM_006155,NM_001008491,NM_001008492,NM_004404	chr2,chr2,chr2,chr2,chr2	-,+,+,+,+	HDLBP,SEPT2,SEPT2,SEPT2,SEPT2	-1912,-2501,-2501,-1943,-1943
chr14:94255427-94255692	chr14	+	94255469	94255643	True	NM_138344,NM_178013	chr14,chr14	+,-	FAM181A,PRIMA1	129614,-703
chr1:34636676-34637664	chr1	+	34636793	34637689	True	NM_052896,NM_032884,NM_001134734	chr1,chr1,chr1	-,+,+	CSMD2,C1orf94,C1orf94	-5350,-4220,4863
chr11:44889243-44889662	chr11	+	44889287	44889599	True	NM_130783,NM_001076787	chr11,chr11	+,-	TSPAN18,TP53I11	-103362,83059
chr22:42229553-42229792	chr22	+	42229641	42229757	True	NM_004599,NM_052945	chr22,chr22	+,-	SREBF2,TNFRSF13C	-586,93114
chrX:65252794-65253403	chrX	+	65252863	65253387	True	NM_001184831,NR_029637,NM_001100431,NM_001184830,NM_007268	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	VSIG4,MIR223,VSIG4,VSIG4,VSIG4	6630,-14211,6630,6630,6630
chr22:16413677-16414368	chr22	+	16413734	16414238	True	NM_001005239,NR_001591	chr22,chr22	-,+	OR11H1,psiTPTE22	35616,668562
chr22:16413677-16414368	chr14	+	20146043	20146217	False	NM_001197287,NM_172194	chr14,chr14	-,+	OR11H2,OR4Q3	36324,69369
chr22:16413677-16414368	chr14	-	19413483	19413657	False	NM_001145442,NM_001013354	chr14,chr14	-,+	POTEM,OR11H12	606667,-35940
chr18:47008818-47009533	chr18	+	47009508	47009578	True	NM_001199341,NM_001199356,NM_001199343,NM_001199355,NM_001199345,NM_001199344,NR_031720,NM_001035006,NM_001035005,NM_001199346,NM_000985,NM_001199342,NM_001199340,NR_002571,NR_002572,NR_002573,NR_003701	chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18	-,-,-,-,-,-,+,-,-,-,-,-,-,-,-,-,-	RPL17,RPL17-C18ORF32,RPL17,RPL17-C18ORF32,RPL17,RPL17,MIR1539,RPL17,C18orf32,C18orf32,RPL17,RPL17,RPL17,SNORD58A,SNORD58B,U58,SNORD58C	9306,9407,9306,8426,9407,9306,4164,9407,4116,4116,9407,9306,9407,8189,8571,6150,6166
chr6:27215459-27215833	chr6	+	27215493	27215845	True	NM_005865,NM_033482	chr6,chr6	+,-	PRSS16,POM121L2	-42,64216
chr8:30672667-30673612	chr8	+	30672829	30673333	True	NM_001009552,NM_005671	chr8,chr8	-,+	PPP2CB,UBXN8	-2477,-71190
chr5:10615956-10616398	chr5	+	10615955	10616377	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-51571,145060
chr4:171015005-171016991	chr4	+	171015142	171016855	True	NM_016228,NM_182662,NM_173872	chr4,chr4,chr4	-,-,+	AADAT,AADAT,CLCN3	-3959,-3770,-473473
chr19:45908438-45908840	chr19	+	45908440	45908754	True	NM_012099,NM_006663,NM_001142502	chr19,chr19,chr19	+,-,-	CD3EAP,PPP1R13L,PPP1R13L	712,-128,905
chr7:79764258-79764604	chr7	+	79764259	79764571	True	NM_001102386,NM_002069	chr7,chr7	-,+	GNAT3,GNAI1	376721,-170
chr11:62341071-62341370	chr11	+	62341239	62341303	True	NM_001404,NM_000327	chr11,chr11	-,+	EEF1G,ROM1	207,38909
chr5:74165962-74167158	chr5	+	74166105	74166991	True	NM_015566,NM_014886	chr5,chr5	-,+	FAM169A,NSA2	-3490,-103060
chr19:57350370-57351415	chr19	+	57350450	57351316	True	NM_006210,NM_001146187,NM_001146326,NM_001146185,NM_001146184,NM_001146327,NR_024059,NM_015363	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,+,-	PEG3,PEG3,ZIM2,PEG3,PEG3,ZIM2,MIMT1,ZIM2	828,828,831,828,828,831,953,831
chr19:29391902-29392262	chr19	+	29391946	29392210	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	63827,311976
chr6:21592849-21593879	chr6	+	21592858	21593873	True	NM_003107,NR_034143	chr6,chr6	+,-	SOX4,LOC729177	98,553599
chr11:58939174-58939383	chr11	+	58939249	58939309	True	NM_001039396,NM_015177	chr11,chr11	-,+	MPEG1,DTX4	41235,502
chr9:92253965-92254323	chr9	+	92253965	92254291	True	NR_024280,NM_006378	chr9,chr9	+,-	LOC100129066,SEMA4D	406,-159354
chr15:53082154-53082445	chr15	+	53082153	53082388	True	NM_004498,NM_002748	chr15,chr15	-,+	ONECUT1,MAPK6	52,-770793
chr7:64360894-64361674	chr7	+	64360961	64361721	True	NR_002789,NR_003099,NM_021148	chr7,chr7,chr7	-,+,+	LOC168474,ZNF273,ZNF273	-46783,1898,1898
chr2:96010986-96011419	chr2	+	96011096	96011354	True	NM_001164464,NM_001034914	chr2,chr2	-,+	TRIM43B,KCNIP3	139175,1413
chr1:13333697-13334300	chr1	+	13333863	13334129	True	NM_001013407,NM_001100631,NM_001013692	chr1,chr1,chr1	+,-,-	PRAMEF5,PRAMEF22,PRAMEF3	25689,-2192,-2171
chr1:13333697-13334300	chr1	-	13033084	13033350	False	NM_001100631,NM_001010889	chr1,chr1	+,-	PRAMEF22,PRAMEF6	2192,-25678
chr1:13333697-13334300	chr1	-	13137989	13138255	False	NM_001100631,NM_001013407	chr1,chr1	+,-	PRAMEF22,PRAMEF5	-102497,-20238
chr3:112051362-112052081	chr3	+	112051487	112052057	True	NM_005944,NM_183061,NM_001004196	chr3,chr3,chr3	+,-,+	CD200,SLC9A10,CD200	-142,-38413,-142
chr1:197670678-197672276	chr1	+	197670731	197671914	True	NM_001195215,NM_001024594	chr1,chr1	-,+	DENND1B,C1orf53	72766,199767
chr8:33370010-33370285	chr8	+	33370021	33370237	True	NM_001102401,NM_025115,NM_032509	chr8,chr8,chr8	-,-,+	C8orf41,C8orf41,MAK16	516,469,-27387
chr11:75431148-75432473	chr11	+	75431156	75432238	True	NM_025098,NM_207577	chr11,chr11	+,-	MOGAT2,MAP6	-2273,-51677
chr7:37030549-37032549	chr7	+	37030675	37032585	True	NM_001039459,NM_130442,NM_018685	chr7,chr7,chr7	-,-,+	ELMO1,ELMO1,ANLN	-6010,-4954,-601294
chr10:15841385-15842634	chr10	+	15841602	15842677	True	NM_024948,NM_001001484	chr10,chr10	-,+	FAM188A,PTER	59893,636289
chrY:2804264-2806119	chrY	+	2804302	2805851	True	NM_003411,NM_001145275,NM_001145276,NM_003140	chrY,chrY,chrY,chrY	+,+,+,-	ZFY,ZFY,ZFY,SRY	-835,-835,-1241,-148510
chr11:795616-796041	chr11	+	795641	796082	True	NM_145887,NM_145886,NM_024698,NM_001191060,NM_001191061,NM_001004,NM_016564	chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,-,+,-	LRDD,LRDD,SLC25A22,SLC25A22,SLC25A22,RPLP2,CEND1	9218,9218,231,1963,2237,13853,-5515
chr15:44718706-44719221	chr15	+	44718817	44719167	True	NR_034171,NM_016396	chr15,chr15	-,+	LOC645212,CTDSPL2	109981,411
chr11:12310596-12310846	chr11	+	12310632	12310824	True	NM_013253,NM_032867	chr11,chr11	-,+	DKK3,MICALCL	-279715,-2236
chr8:121497008-121498620	chr8	+	121497197	121498651	True	NM_022045,NM_014078	chr8,chr8	+,-	MTBP,MRPL13	-39584,-39550
chr9:134153617-134153895	chr9	+	134153656	134153944	True	NM_032728,NM_033387	chr9,chr9	+,-	PPAPDC3,FAM78A	11136,-1750
chr1:14922677-14923073	chr1	+	14922742	14923108	True	NM_201628,NM_015209,NR_027136	chr1,chr1,chr1	+,+,-	KAZN,KAZN,C1orf126	2104,2104,555902
chr2:219284509-219285467	chr2	+	219284548	219285301	True	NM_007127,NM_022152	chr2,chr2	+,-	VIL1,TMBIM1	-761,-127268
chr2:207660250-207660950	chr2	+	207660254	207660845	True	NR_036077,NR_036078	chr2,chr2	-,+	MIR3130-1,MIR3130-2	-12222,-12348
chr17:9927048-9927589	chr17	+	9927047	9927566	True	NM_004246,NM_001130831	chr17,chr17	+,-	GLP2R,GAS7	-197732,2107
chr10:29188441-29189739	chr10	+	29188911	29189732	True	NR_033805,NM_012342	chr10,chr10	-,+	LOC220906,BAMBI	-367628,-222548
chr4:123652027-123653538	chr4	+	123652307	123653358	True	NM_001178007,NM_152618,NR_024041	chr4,chr4,chr4	+,+,-	BBS12,BBS12,CETN4P	498,498,312
chr16:31212881-31213136	chr16	+	31213049	31213159	True	NM_145182,NM_001008274,NM_013258	chr16,chr16,chr16	-,+,-	PYCARD,TRIM72,PYCARD	988,12182,988
chr11:57087581-57088073	chr11	+	57087630	57087994	True	NM_002559,NM_033396	chr11,chr11	+,-	P2RX3,TNKS1BP1	17954,4469
chr1:162337373-162337898	chr1	+	162337379	162337937	True	NM_001126060,NM_182581	chr1,chr1	+,-	NOS1AP,C1orf111	-4658,8757
chr12:53468514-53468853	chr12	+	53468518	53468888	True	NM_002178,NM_032840	chr12,chr12	+,-	IGFBP6,SPRYD3	22547,4366
chr19:5565977-5567517	chr19	+	5566248	5567534	True	NM_001201338,NR_027064	chr19,chr19	+,-	SAFB,PLAC2	55511,521
chr10:94044087-94045851	chr10	+	94044144	94045602	True	NM_017824,NM_014912	chr10,chr10	+,-	MARCH5,CPEB3	5317,5323
chr7:100823083-100823306	chr7	+	100823133	100823195	True	NM_198571,NM_001283	chr7,chr7	-,+	C7orf52,AP1S1	412,-25498
chr5:177092626-177093998	chr5	+	177093043	177093737	True	NR_026921,NM_007255	chr5,chr5	-,+	LOC202181,B4GALT7	5593,-65975
chr5:177092626-177093998	chr5	-	175670921	175671493	False	NR_036494,NM_198567	chr5,chr5	-,+	LOC643201,C5orf25	-44623,-5604
chr6:33359421-33359640	chr6_qbl_hap6	+	4591652	4591916	False	NM_001350	chr6_qbl_hap6	-	DAXX	-68610
chr6:33359421-33359640	chr6	+	33359425	33359689	True	NM_001014433,NM_002263	chr6,chr6	-,+	CUTA,KIFC1	26426,-163
chr6:33359421-33359640	chr6_ssto_hap7	+	4839641	4839905	False	NM_001014433,NM_002263	chr6_ssto_hap7,chr6_ssto_hap7	-,+	CUTA,KIFC1	26456,-163
chr6:33359421-33359640	chr6_mcf_hap5	+	4833181	4833367	False	NM_001350,NM_001185181	chr6_mcf_hap5,chr6_mcf_hap5	-,+	DAXX,PFDN6	-68646,-102076
chr5:138090487-138091513	chr5	+	138090829	138091529	True	NM_015564,NM_001903	chr5,chr5	-,+	LRRTM2,CTNNA1	119578,-1773
chr5:107608348-107608710	chr5	+	107608348	107608611	True	NM_005246,NM_001163315	chr5,chr5	+,-	FER,FBXL17	474911,109249
chr1:223568112-223568412	chr1	+	223568156	223568398	True	NM_152610,NM_001037175	chr1,chr1	+,-	C1orf65,SUSD4	-1492,-30612
chr18:77622911-77623276	chr18	+	77622947	77623239	True	NM_012283,NM_001146343	chr18,chr18	+,-	KCNG2,PQLC1	428,88464
chr16:84730987-84731410	chr16	+	84731184	84731275	True	NM_005153,NM_021149	chr16,chr16	+,-	USP10,COTL1	2279,-79515
chr2:242675625-242676234	chr2	+	242675786	242676066	True	NM_152783,NR_033255	chr2,chr2	+,-	D2HGDH,DTYMK	-1807,-49403
chr22:20745383-20746653	chr22	+	20745517	20745821	True	NM_153334,NR_003253,NM_003426	chr22,chr22,chr22	-,+,+	SCARF2,ZNF74,ZNF74	46375,2658,2658
chr2:97533216-97533633	chr2	+	97533224	97533458	True	NM_016466,NM_017789,NM_199078	chr2,chr2,chr2	-,-,+	ANKRD39,SEMA4C,CNNM3	-9468,2327,-51284
chr2:69202273-69202615	chr2	+	69202290	69202644	True	NM_182536,NM_019617	chr2,chr2	-,+	GKN2,GKN1	-22188,-637
chr16:67207720-67207931	chr16	+	67207827	67207963	True	NM_001185058,NM_003946,NM_001040715,NM_001185057	chr16,chr16,chr16,chr16	+,+,-,+	NOL3,NOL3,KIAA0895L,NOL3	-3473,-122,9970,-113
chr1:63249892-63250793	chr1	+	63249934	63250745	True	NM_033407,NM_178221,NM_032852	chr1,chr1,chr1	-,+,+	DOCK7,ATG4C,ATG4C	-95965,-208,-208
chr1:161286899-161287638	chr1	+	161287185	161287691	True	NM_003001,NM_001035511,NM_000530,NM_001035513,NM_001035512	chr1,chr1,chr1,chr1,chr1	+,+,-,+,+	SDHC,SDHC,MPZ,SDHC,SDHC	-3086,-3086,-7423,-3086,-3086
chr17:19997134-19998375	chr17	+	19997365	19998348	True	NM_001033553,NM_152904,NM_007202	chr17,chr17,chr17	+,+,-	SPECC1,SPECC1,AKAP10	-7081,-7081,-116236
chr10:30660604-30661508	chr10	+	30660637	30661270	True	NR_003524,NM_005204	chr10,chr10	-,+	LOC729668,MAP3K8	2166,61595
chr12:121569140-121569473	chr12	+	121569197	121569513	True	NM_198213,NM_002562,NR_033949,NR_033948,NR_033952,NR_033953,NR_033950,NR_033951,NR_033956,NR_033954,NR_033955	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,+,+,+,+,+,+,+,+	OASL,P2RX7,P2RX7,P2RX7,P2RX7,P2RX7,P2RX7,P2RX7,P2RX7,P2RX7,P2RX7	-92417,1117,1117,1117,1117,1108,1117,1117,1117,1117,1117
chr16:50059597-50059862	chr16	+	50059596	50059910	True	NM_153261,NM_015069	chr16,chr16	+,-	TMEM188,ZNF423	-459,-198678
chr8:42389072-42390927	chr8	+	42389107	42390832	True	NM_138436,NM_006749,NM_001135676,NM_001135675,NM_001135674	chr8,chr8,chr8,chr8,chr8	+,-,+,+,+	C8orf40,SLC20A2,C8orf40,C8orf40,C8orf40	5885,6295,5465,6106,5932
chrX:68836503-68836854	chrX	+	68836617	68836903	True	NM_001002254,NM_001399,NM_001005609,NM_001005610,NM_001005613,NM_001005612	chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,+	AWAT2,EDA,EDA,EDA,EDA,EDA	432935,-757,-757,-757,-757,-757
chr10:104004438-104005322	chr10	+	104004443	104005239	True	NM_001199378,NM_001199379,NM_005029,NM_004193	chr10,chr10,chr10,chr10	+,+,-,+	GBF1,GBF1,PITX3,GBF1	15,15,-3212,15
chr18:55813821-55815609	chr18	+	55813862	55814916	True	NM_005603,NM_001144965,NM_001144971,NM_001144969,NM_001144968	chr18,chr18,chr18,chr18,chr18	-,+,+,+,+	ATP8B1,NEDD4L,NEDD4L,NEDD4L,NEDD4L	-343535,1648,1648,1648,1648
chr10:128992869-128993243	chr10	+	128992935	128993173	True	NM_001030013,NM_001039762	chr10,chr10	+,-	NPS,FAM196A	354439,1299
chr9:130541466-130542227	chr9	+	130541519	130542077	True	NM_005489,NR_036055,NM_170600,NM_001261	chr9,chr9,chr9,chr9	-,+,-,+	SH2D3C,MIR2861,SH2D3C,CDK9	-7898,6119,-471,6227
chr18:74536815-74538158	chr18	+	74536915	74537970	True	NM_007345,NM_001025081	chr18,chr18	+,-	ZNF236,MBP	-850,191144
chr5:137550462-137551458	chr5	+	137551228	137551306	True	NM_005733,NM_004661	chr5,chr5	+,-	KIF20A,CDC23	-36866,-2196
chrX:48217764-48218721	chrX	+	48217978	48218240	True	NM_175711,NM_021014,NM_001034832	chrX,chrX,chrX	-,-,+	SSX3,SSX3,SSX4B	-1836,-1836,24727
chr20:46752642-46753121	chr20	+	46752734	46753146	True	NR_026958,NM_198596	chr20,chr20	+,-	LOC284749,SULF2	235507,-337374
chr8:23315885-23316555	chr8	+	23316029	23316557	True	NM_016612,NM_001128930,NM_004901	chr8,chr8,chr8	+,-,-	SLC25A37,ENTPD4,ENTPD4	69805,-785,-893
chr6:45388507-45389337	chr6	+	45388569	45389339	True	NM_004348,NM_181356	chr6,chr6	+,-	RUNX2,SUPT3H	574,-42899
chr1:3538708-3539864	chr1	+	3539064	3539856	True	NM_001409,NM_182752	chr1,chr1	-,+	MEGF6,TPRG1L	-11005,1699
chr1:168105665-168105868	chr1	+	168105748	168105915	True	NM_153832,NM_001031800	chr1,chr1	-,+	GPR161,TIPRL	-124,42255
chr18:74518158-74518531	chr18	+	74518243	74518517	True	NM_007345,NM_001025081	chr18,chr18	+,-	ZNF236,MBP	17598,210588
chr3:33877724-33878705	chr3	+	33877723	33878759	True	NM_015097,NR_027867	chr3,chr3	-,+	CLASP2,PDCD6IP	-117875,-7647
chrX:71262208-71262693	chrX	+	71262261	71262723	True	NR_002309,NM_001024455	chrX,chrX	+,-	RPS26P11,RGAG4	1535,89078
chr9:99841748-99842413	chr9	+	99841766	99842261	True	NR_002942,NM_001045477	chr9,chr9	-,+	LOC340508,FAM22G	2017,-150531
chr14:23586973-23587716	chr14	+	23587100	23587700	True	NM_001805,NM_017924	chr14,chr14	-,+	CEBPE,C14orf119	824,-22363
chr1:25289778-25290952	chr1	+	25289949	25290925	True	NM_013943,NM_001031680	chr1,chr1	+,-	CLIC4,RUNX3	-218240,626
chr3:122380146-122380548	chr3	+	122380181	122380507	True	NM_031458,NM_017554	chr3,chr3	-,+	PARP9,PARP14	-96658,19164
chr14:20135226-20136753	chr14	+	20135276	20136734	True	NM_001197287,NM_172194	chr14,chr14	-,+	OR11H2,OR4Q3	45807,78852
chr6:16239092-16239388	chr6	+	16239247	16239435	True	NM_000332,NM_006877	chr6,chr6	-,+	ATXN1,GMPR	522336,-487
chr3:155567955-155569123	chr3	+	155568117	155568388	True	NM_001190992,NM_004733,NM_003875	chr3,chr3,chr3	-,-,+	SLC33A1,SLC33A1,GMPS	3917,3917,19936
chr16:89006018-89006341	chr16	+	89006113	89006347	True	NM_175931,NM_016209	chr16,chr16	-,+	CBFA2T3,TRAPPC2L	1311,-82658
chr14:47751180-47751755	chr14	+	47751354	47751617	True	NM_182830,NM_020937	chr14,chr14	-,+	MDGA2,FANCM	60872,-2146278
chr3:125559303-125559585	chr3	+	125559321	125559567	True	NR_024250,NR_031687	chr3,chr3	+,-	LOC100125556,MIR548I1	75876,-49926
chr14:101348486-101349171	chr14	+	101348718	101349205	True	NR_029965,NR_029966,NR_029699,NR_029696,NR_030173,NR_030617,NR_029889,NM_001134888	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,+,+,+,+,-	MIR431,MIR433,MIR136,MIR127,MIR432,MIR665,MIR337,RTL1	-1425,-546,1833,110,1614,-7399,-7939,2030
chr19:35066273-35068150	chr19	+	35066763	35067901	True	NR_027620,NM_001080436	chr19,chr19	-,+	LOC643719,WTIP	745,-93940
chr5:102594852-102595052	chr5	+	102594947	102595101	True	NM_033211,NM_017676	chr5,chr5	+,-	C5orf30,GIN1	-556,-139105
chr1:33789923-33790372	chr1	+	33790007	33790250	True	NR_037400,NM_152493	chr1,chr1	-,+	MIR3605,ZNF362	7894,-67884
chr10:82300106-82301306	chr10	+	82300152	82301299	True	NM_207372,NM_138812,NM_001145719	chr10,chr10,chr10	+,-,+	SH2D4B,DYDC1,SH2D4B	-2545,-183652,10
chr18:12369775-12370751	chr18	+	12370140	12370803	True	NM_006796,NM_001142405	chr18,chr18	-,+	AFG3L2,SLMO1	6525,37091
chr19:42745441-42746213	chr19	+	42745559	42746175	True	NM_019884,NM_133444	chr19,chr19	-,+	GSK3A,ZNF526	619,-21121
chr5:9547466-9547833	chr5	+	9547468	9547759	True	NM_003966,NR_003689	chr5,chr5	-,+	SEMA5A,SNORD123	-1235,1179
chr16:21831774-21832121	chr16	+	21831835	21831943	True	NM_170664,NR_003370	chr16,chr16	+,-	OTOA,RRN3P1	-115602,-1340
chr17:9691115-9692182	chr17	+	9691391	9692198	True	NM_001105571,NM_004246	chr17,chr17	-,+	DHRS7C,GLP2R	2459,37182
chr14:94493153-94494040	chr14	+	94493353	94493929	True	NM_023112,NM_001202429	chr14,chr14	+,-	OTUB2,ASB2	-680,-50277
chr4:146859695-146859917	chr4	+	146859818	146859958	True	NM_007080,NM_178835	chr4,chr4	+,-	LSM6,ZNF827	236876,-211
chr13:42497689-42498779	chr13	+	42497750	42498703	True	NM_015058,NM_001204504	chr13,chr13	-,+	KIAA0564,DGKH	36575,115468
chr14:75518940-75520311	chr14	+	75518943	75520265	True	NM_001042430,NM_014381,NM_001040108	chr14,chr14,chr14	+,-,-	FAM164C,MLH3,MLH3	16033,-708,-708
chr3:11301697-11303242	chr3	+	11301768	11303131	True	NM_000861,NM_001128221	chr3,chr3	+,-	HRH1,VGLL4	-7434,307317
chr7:27779997-27780302	chr7	+	27780000	27780348	True	NM_006024,NM_152740,NM_001079864	chr7,chr7,chr7	+,-,+	TAX1BP1,HIBADH,TAX1BP1	-313,-77380,-313
chr21:47577182-47578219	chr21	+	47577676	47578156	True	NM_001849,NM_006657,NM_206965	chr21,chr21,chr21	+,-,-	COL6A2,FTCD,FTCD	-59694,-2195,-2195
chr1:235493722-235494939	chr1	+	235493802	235494869	True	NM_031371,NM_001037277,NM_016374,NR_036605,NM_004837	chr1,chr1,chr1,chr1,chr1	-,+,-,+,+	ARID4B,GGPS1,ARID4B,GGPS1,GGPS1	-2270,-2105,-2270,-1989,-1989
chr11:134089848-134090208	chr11	+	134089973	134090060	True	NM_052875,NM_015261	chr11,chr11	+,-	VPS26B,NCAPD3	4500,4421
chr1:41161183-41162328	chr1	+	41161440	41162371	True	NR_024567,NM_014223,NM_001142589,NM_001142588,NM_001142587,NM_001142590	chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,+,+,+	LOC100130557,NFYC,NFYC,NFYC,NFYC,NFYC	-3507,-4259,-4259,-4259,-4259,-3821
chr3:129719904-129720339	chr3	+	129720026	129720088	True	NM_001128224,NM_007117	chr3,chr3	-,+	TMCC1,TRH	-107607,-26965
chr20:50175101-50176323	chr20	+	50175258	50176362	True	NM_014484,NM_001136021	chr20,chr20	+,-	MOCS3,NFATC2	-599953,2856
chr7:140771610-140771900	chr7	+	140771641	140771945	True	NM_053035,NM_001195278	chr7,chr7	-,+	MRPS33,LOC100131199	-56860,2086
chr1:113617756-113618612	chr1	+	113618049	113618315	True	NM_003051,NM_014813	chr1,chr1	-,+	SLC16A1,LRIG2	-119074,-2277
chr11:124933416-124933627	chr11	+	124933447	124933613	True	NM_198277,NM_001080546,NM_001145290	chr11,chr11,chr11	+,-,+	SLC37A2,TMEM218,SLC37A2	-485,39642,-485
chr20:35271281-35271624	chr20	+	35271443	35271625	True	NM_175077,NM_032214,NR_026562	chr20,chr20,chr20	-,-,+	SLA2,SLA2,C20orf24	2991,2991,-37366
chr10:104001673-104002540	chr10	+	104001696	104002332	True	NM_001199378,NM_001199379,NM_005029,NM_004193	chr10,chr10,chr10,chr10	+,+,-,+	GBF1,GBF1,PITX3,GBF1	2922,2922,-465,2922
chr3:9793181-9794454	chr3	+	9793281	9794374	True	NM_016826,NM_016827,NM_016820,NM_016821,NM_016828,NM_016829,NM_016819,NM_003656,NM_002542	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,+,+,+,-,+	OGG1,OGG1,OGG1,OGG1,OGG1,OGG1,OGG1,CAMK1,OGG1	-1704,-1704,-1704,-1704,-1704,-1704,-1704,17344,-1704
chr16:67746793-67748327	chr16	+	67747068	67748110	True	NR_027399,NR_027398,NM_030819,NM_001012984	chr16,chr16,chr16,chr16	-,-,-,+	GFOD2,GFOD2,GFOD2,C16orf86	5213,5213,5213,-46409
chr17:38953720-38954130	chr17	+	38954111	38954186	True	NM_001195387,NM_181535	chr17,chr17	+,-	TMEM99,KRT28	21157,2084
chr10:127463779-127464132	chr10	+	127463950	127464076	True	NM_147191,NM_078468	chr10,chr10	-,+	MMP21,BCCIP	364,48027
chrX:18443359-18443651	chrX	+	18443476	18443648	True	NR_033717,NM_003159	chrX,chrX	-,+	SCML2,CDKL5	-70632,76
chr20:62688715-62688940	chr20	+	62688882	62688970	True	NM_198723,NM_018419,NM_003195	chr20,chr20,chr20	+,-,+	TCEA2,SOX18,TCEA2	-494,-7903,5039
chr16:86611643-86611889	chr16	+	86611646	86611906	True	NM_005250,NR_027490	chr16,chr16	+,-	FOXL1,MTHFSD	208,-22805
chr20:20032280-20032839	chr20	+	20032293	20032655	True	NM_001167816,NM_015585,NM_016652	chr20,chr20,chr20	+,+,-	C20orf26,C20orf26,CRNKL1	4634,502,4085
chr1:16133655-16134003	chr1	+	16133701	16134021	True	NM_001089591,NM_015001	chr1,chr1	-,+	UQCRHL,SPEN	223,40337
chr15:69590988-69591204	chr15	+	69591103	69591173	True	NM_017705,NM_006305	chr15,chr15	+,-	PAQR5,ANP32A	120,-477842
chr5:170733940-170735215	chr5	+	170734180	170735158	True	NM_021025,NR_037474	chr5,chr5	+,-	TLX3,MIR3912	1129,78657
chr2:219824594-219824800	chr2	+	219824677	219824775	True	NM_003936,NM_017521	chr2,chr2	+,-	CDK5R2,FEV	-330,25654
chr19:50030848-50031057	chr19	+	50030902	50031018	True	NM_020650,NR_029703	chr19,chr19	+,-	RCN3,MIR150	-83,-26777
chr17:1388192-1388616	chr17	+	1388192	1388592	True	NM_001080779,NM_001080950,NR_028514,NM_033375	chr17,chr17,chr17,chr17	-,-,+,-	MYO1C,MYO1C,LOC100306951,MYO1C	7459,509,31620,6430
chr15:85254535-85256153	chr15	+	85254669	85256164	True	NM_014630,NM_014300	chr15,chr15	+,-	ZNF592,SEC11A	35653,3561
chr9:140009715-140010100	chr9	+	140009728	140010064	True	NM_013379,NM_000832	chr9,chr9	-,+	DPP7,GRIN1	-533,23544
chr15:69608713-69609009	chr15	+	69608761	69609031	True	NM_001104554,NM_006305	chr15,chr15	+,-	PAQR5,ANP32A	-2078,-495500
chr1:36622389-36622616	chr1	+	36622482	36622622	True	NM_014408,NM_018067	chr1,chr1	-,+	TRAPPC3,MAP7D1	-7415,-730
chr21:46074390-46074614	chr21	+	46074496	46074636	True	NM_198697,NM_198698,NM_198692	chr21,chr21,chr21	+,-,+	KRTAP12-3,KRTAP12-4,KRTAP10-11	3212,-2,-8216
chr3:47015955-47016961	chr3	+	47015964	47017005	True	NM_144716,NM_015175	chr3,chr3	-,+	CCDC12,NBEAL2	1315,4167
chr16:31043496-31044133	chr16	+	31043545	31044109	True	NM_004604,NM_052874	chr16,chr16	+,-	STX4,STX1B	793,-21716
chr15:34276762-34278398	chr15	+	34276976	34278143	True	NM_012125,NM_020371	chr15,chr15	+,-	CHRM5,AVEN	-15946,53211
chrX:153814526-153815610	chrX	+	153815057	153815484	True	NM_139250,NM_001327	chrX,chrX	+,+	CTAG1A,CTAG1B	-1690,-1690
chrX:153814526-153815610	chrX	-	153880116	153880166	False	NM_172377,NM_020994,NM_139250	chrX,chrX,chrX	-,-,+	CTAG2,CTAG2,CTAG1A	1737,1737,-66749
chrX:153814526-153815610	chrX	-	153845455	153845882	False	NM_139250,NM_001327	chrX,chrX	-,-	CTAG1A,CTAG1B	1690,1690
chr12:123463443-123463715	chr12	+	123463453	123463757	True	NM_203444,NM_024623,NM_018694,NM_001002251,NM_001002252,NM_016638	chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,+,+,+	ABCB9,OGFOD2,ARL6IP4,ARL6IP4,ARL6IP4,ARL6IP4	-3701,-4150,1122,1122,1122,1122
chr12:127650699-127651312	chr12	+	127650704	127651154	True	NR_033970,NR_033987	chr12,chr12	-,+	LOC440117,FLJ37505	-291468,715007
chr3:10051492-10051836	chr3	+	10051502	10051632	True	NM_001008737,NM_033084	chr3,chr3	-,+	LOC401052,FANCD2	1197,16480
chr19:2899747-2900140	chr19	+	2899859	2899925	True	NM_021217,NM_173480	chr19,chr19	-,+	ZNF77,ZNF57	45094,970
chr1:201350446-201352204	chr1	+	201350600	201352184	True	NM_000364,NM_001005337,NM_001001431,NM_001001430,NM_001001432	chr1,chr1,chr1,chr1,chr1	-,+,-,-,-	TNNT2,PKP1,TNNT2,TNNT2,TNNT2	-3795,-98071,-3795,-3795,-3795
chr1:144339265-144339719	chr1	+	144339339	144339767	True	NR_024584,NM_001037675,NR_024510,NR_024511	chr1,chr1,chr1,chr1	-,+,-,-	LOC728875,NBPF9,LOC728855,LOC728855	2038,275191,1056,1056
chr1:144339265-144339719	chr1	+	143743015	143743177	False	NR_033189,NR_027469,NR_027468	chr1,chr1,chr1	+,-,-	LOC100130000,LOC100286793,FLJ39739	-55936,1460,1330
chr1:144339265-144339719	chr1	+	144519650	144519868	False	NR_024584,NM_001037675	chr1,chr1	-,+	LOC728875,NBPF9	2151,95090
chr1:144339265-144339719	chr1	-	149577606	149577886	False	NM_001024599,NR_024510	chr1,chr1	-,+	HIST2H2BF,LOC728855	-178377,-1204
chr1:144339265-144339719	chr1	+	147930537	147930965	False	NM_001097616,NR_027468	chr1,chr1	+,-	GPR89C,FLJ39739	-505021,1065
chr7:44788942-44789259	chr7	+	44789056	44789254	True	NM_174929,NM_031449,NM_138635	chr7,chr7,chr7	+,+,-	ZMIZ2,ZMIZ2,H2AFV	6532,-577,98521
chr10:43866362-43866873	chr10	+	43866411	43866623	True	NM_001184963,NM_001098208,NM_173160	chr10,chr10,chr10	+,-,+	FXYD4,HNRNPF,FXYD4	468,25706,468
chr3:39446074-39447093	chr3	+	39446244	39446884	True	NM_001171174,NR_002325,NM_001012321,NM_002295,NR_002324	chr3,chr3,chr3,chr3,chr3	-,+,+,+,+	CX3CR1,SNORA6,RPSA,RPSA,SNORA62	-123018,2997,2226,1319,5660
chr20:31868892-31870095	chr20	+	31869187	31870125	True	NM_033197,NM_016082	chr20,chr20	+,-	C20orf114,CDK5RAP1	815,119262
chrX:155225934-155226368	chrY	+	59328982	59329173	False	NR_002179,NM_002186	chrY,chrY	-,+	TTTY17C,IL9R	-31998062,1078
chrX:155225934-155226368	chrX	+	155225976	155226167	True	NM_002186,NM_018196	chrX,chrX	+,-	IL9R,TMLHE	1078,-383354
chr1:9350071-9350414	chr1	+	9350071	9350391	True	NM_025106,NR_029610	chr1,chr1	+,-	SPSB1,MIR34A	2549,-138235
chr12:57625660-57625946	chr12	+	57625715	57625873	True	NM_005412,NM_020142,NR_029415,NR_029416,NR_029417,NM_001166358,NM_001166359,NM_001166356,NM_001166357	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,-,+,+,+,+,+,+,+	SHMT2,NDUFA4L2,SHMT2,SHMT2,SHMT2,SHMT2,SHMT2,SHMT2,SHMT2	-2410,8652,-1655,-1938,-2410,-1938,-1655,-2410,-1623
chr9:137775942-137776846	chr9	+	137775948	137776814	True	NR_037460,NM_015837,NM_002003,NM_004108	chr9,chr9,chr9,chr9	-,+,-,+	MIR3689A,FCN2,FCN1,FCN2	-33458,-3343,33052,-3343
chr21:18984278-18984480	chr21	+	18984338	18984488	True	NM_001130914,NM_001338,NM_006806	chr21,chr21,chr21	-,+,-	BTG3,CXADR,BTG3	830,-99059,830
chr6:47781144-47781724	chr6	+	47781185	47781732	True	NR_033806,NM_001013732	chr6,chr6	+,-	OPN5,C6orf138	-26432,254751
chr18:47814228-47814690	chr18	+	47814283	47814565	True	NM_001204137,NM_001204138,NM_001204139,NM_015844,NM_015847,NM_015846,NM_001204140,NM_001204141,NM_001101654,NM_001204136,NM_001204151,NM_001039535,NM_001204143,NM_015845,NM_002384,NM_001204142,NM_014593	chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18	-,-,-,-,-,-,-,-,-,-,-,+,-,-,-,-,-	MBD1,MBD1,MBD1,MBD1,MBD1,MBD1,MBD1,MBD1,CXXC1,MBD1,MBD1,SKA1,MBD1,MBD1,MBD1,MBD1,CXXC1	-6139,-6139,-6139,-6139,-6139,-6139,-6139,-6139,177,-6139,-7896,86826,-6146,-6139,-6139,-6139,177
chr9:139744293-139744615	chr9	+	139744451	139744599	True	NM_003792,NM_206920,NM_014172,NM_001080482,NM_001135861	chr9,chr9,chr9,chr9,chr9	-,+,+,+,+	EDF1,MAMDC4,PHPT1,C9orf172,PHPT1	16189,2219,-1246,-5635,-1246
chr15:67418695-67419451	chr15	+	67418807	67419495	True	NM_001145102,NM_024666	chr15,chr15	+,-	SMAD3,AAGAB	-804,127629
chr1:110611054-110611494	chr1	+	110611118	110611493	True	NM_033088,NM_006492	chr1,chr1	+,-	FAM40A,ALX3	-33928,1879
chr12:133695849-133697137	chr12	+	133696153	133697189	True	NM_015394,NM_001191054	chr12,chr12	+,-	ZNF10,LOC647589	10024,115290
chr17:61851175-61851463	chr17	+	61851218	61851450	True	NM_203499,NM_007372,NM_020198	chr17,chr17,chr17	+,+,-	DDX42,DDX42,CCDC47	116,116,-130
chr1:229411458-229412032	chr1	+	229411657	229412027	True	NM_145257,NM_004578	chr1,chr1	-,+	C1orf96,RAB4A	66711,-4830
chr22:50684513-50685130	chr22	+	50684629	50685117	True	NM_032019,NM_031454,NM_001159286,NM_020461	chr22,chr22,chr22,chr22	-,+,-,-	HDAC10,SELO,HDAC10,TUBGCP6	4767,-45272,4767,-1229
chr19:44117226-44118458	chr19	+	44117458	44118192	True	NM_001145641,NM_182498	chr19,chr19	+,-	SRRM5,ZNF428	-1256,5872
chr10:14815532-14815893	chr10	+	14815709	14815877	True	NM_031453,NM_016299	chr10,chr10	-,+	FAM107B,HSPA14	1075,64383
chr17:46705134-46705341	chr17	+	46705283	46705361	True	NM_024017,NR_033205,NR_029582	chr17,chr17,chr17	-,+,-	HOXB9,LOC404266,MIR196A1	-1448,-32014,4610
chr8:22524041-22524490	chr8	+	22524176	22524356	True	NM_018688,NM_021174	chr8,chr8	-,+	BIN3,KIAA1967	2355,-61688
chr7:39607759-39609604	chr7	+	39608990	39609580	True	NM_138701,NM_020192	chr7,chr7	-,+	C7orf11,C7orf36	564721,-3038
chr11:43380240-43380453	chr11	+	43380242	43380482	True	NM_018259,NR_033868	chr11,chr11	+,-	TTC17,LOC399881	30,-89323
chr12:57145154-57146028	chr12	+	57145449	57146045	True	NM_000946,NM_003725	chr12,chr12	-,+	PRIM1,HSD17B6	151,11062
chr1:162351773-162352466	chr1	+	162352041	162352507	True	NM_001135240,NM_001085375,NM_182581	chr1,chr1,chr1	+,+,-	C1orf226,C1orf226,C1orf111	-3396,-572,-5397
chr19:7506224-7506968	chr19	+	7506416	7506950	True	NR_024491,NM_001130955	chr19,chr19	-,+	LOC100128573,ARHGEF18	31347,-1893
chr19:55344208-55345685	chr19	+	55344345	55345617	True	NM_012314,NM_001127255	chr19,chr19	+,-	KIR2DS4,NLRP7	-222,113306
chr12:41863586-41864475	chr12	+	41863831	41864254	True	NM_001099650,NM_013377	chr12,chr12	-,+	GXYLT1,PDZRN4	674469,-32341
chr5:151151792-151152169	chr5	+	151151979	151152179	True	NM_005754,NM_198395,NM_004045	chr5,chr5,chr5	+,+,-	G3BP1,G3BP1,ATOX1	-554,-554,-13769
chr7:23222455-23222660	chr7	+	23222559	23222675	True	NM_032581,NM_007342	chr7,chr7	-,+	FAM126A,NUPL2	-168789,-1171
chr3:129325725-129326021	chr3	+	129325847	129326045	True	NM_153833,NM_015103	chr3,chr3	+,-	H1FOO,PLXND1	-63841,-265
chrX:48902384-48902646	chrX	+	48902555	48902655	True	NM_001163322,NM_006521	chrX,chrX	+,-	CCDC120,TFE3	13860,-1565
chr12:64616645-64617110	chr12	+	64617015	64617159	True	NM_007235,NM_152440	chr12,chr12	+,-	XPOT,C12orf66	180993,-939
chr17:74382943-74383208	chr17	+	74383024	74383240	True	NM_021972,NM_182965,NM_002766,NM_001142601,NM_001142602	chr17,chr17,chr17,chr17,chr17	+,+,-,+,+	SPHK1,SPHK1,PRPSAP1,SPHK1,SPHK1	-2385,-2385,-32794,-2385,-1786
chr8:43144027-43144741	chr8	+	43144076	43144609	True	NR_027669,NM_001005365,NM_001002920	chr8,chr8,chr8	-,+,+	RNF170,POTEA,POTEA	-392210,2975,2975
chr5:71803878-71804819	chr5	+	71803916	71804816	True	NM_024754,NM_152625	chr5,chr5	+,-	PTCD2,ZNF366	-187769,-667
chr14:62481445-62483131	chr14	+	62481685	62483059	True	NM_031914,NM_001017970	chr14,chr14	+,-	SYT16,TMEM30B	-19195,-733155
chr19:48611618-48612997	chr19	+	48611687	48612701	True	NM_001159323,NM_001159322,NM_022142,NM_003706	chr19,chr19,chr19,chr19	-,-,+,-	PLA2G4C,PLA2G4C,ELSPBP1,PLA2G4C	1458,1458,-113839,1458
chr15:59940327-59940853	chr15	+	59940631	59940812	True	NM_004751,NM_004492	chr15,chr15	+,-	GCNT3,GTF2A2	-36704,8982
chr11:66114503-66114912	chr11	+	66114627	66114961	True	NM_015399,NM_006876,NM_001024957,NM_153266	chr11,chr11,chr11,chr11	-,-,-,+	BRMS1,B3GNT1,BRMS1,TMEM151A	-2045,250,-2045,-55305
chr19:59065035-59065555	chr19	+	59065082	59065594	True	NM_198426,NR_027334,NM_003969,NM_014453,NM_005762	chr19,chr19,chr19,chr19,chr19	-,+,-,-,+	CHMP2A,LOC100131691,UBE2M,CHMP2A,TRIM28	811,4958,4799,942,-9297
chr9:6015192-6015576	chr9	+	6015262	6015564	True	NM_001017969,NR_024095,NR_024094,NM_012416,NM_005511	chr9,chr9,chr9,chr9,chr9	-,-,-,-,+	KIAA2026,RANBP6,RANBP6,RANBP6,MLANA	-7259,130,130,108,-124417
chr1:22109275-22109634	chr1	+	22109339	22109669	True	NM_001032730,NM_001013693,NM_032236	chr1,chr1,chr1	-,+,-	USP48,LDLRAD2,USP48	69,29088,69
chr17:26849778-26850083	chr17	+	26849943	26850057	True	NM_005148,NM_003593	chr17,chr17	-,+	UNC119,FOXN1	29639,901
chr17:43648097-43649752	chr17	+	43648405	43648550	True	NR_026901,NR_037772	chr17,chr17	-,+	LOC644172,CRHR1	31263,49159
chrX:23801993-23802279	chrX	+	23802031	23802274	True	NM_001037171,NM_002970,NR_027783	chrX,chrX,chrX	-,+,+	ACOT9,SAT1,SAT1	-40624,-807,-807
chr12:109248619-109249469	chr12	+	109248674	109249482	True	NM_001917,NM_001161330,NM_018984	chr12,chr12,chr12	+,-,-	DAO,SSH1,SSH1	24374,1927,1927
chr5:122115897-122116423	chr5	+	122115898	122116229	True	NM_000943,NM_003100	chr5,chr5	-,+	PPIC,SNX2	256255,-5199
chr20:36888816-36889030	chr20	+	36888864	36888926	True	NM_001029864,NM_001725	chr20,chr20	-,+	KIAA1755,BPI	298,43625
chr2:121555999-121556671	chr2	+	121556099	121556676	True	NR_027181,NM_005270	chr2,chr2	-,+	LOC84931,GLI2	-332174,-1284
chr10:43955543-43955914	chr10	+	43955627	43955820	True	NR_026693,NM_001098204	chr10,chr10	+,-	ZNF487P,HNRNPF	-23111,-50931
chr1:3529786-3530098	chr1	+	3529974	3530100	True	NM_001409,NM_182752	chr1,chr1	-,+	MEGF6,TPRG1L	-1915,11455
chr1:24194856-24195092	chr1	+	24194948	24195102	True	NM_000147,NM_007260	chr1,chr1	-,+	FUCA1,LYPLA2	-89,-77353
chr17:11781962-11783370	chr17	+	11782247	11783406	True	NM_004662,NM_144680	chr17,chr17	+,-	DNAH9,ZNF18	2812,117333
chr4:48349260-48350629	chr4	+	48349546	48350427	True	NM_020846,NM_003215	chr4,chr4	+,-	SLAIN2,TEC	-5997,-77732
chr5:61601173-61601627	chr5	+	61601200	61601664	True	NM_004520,NM_014473,NM_001098511	chr5,chr5,chr5	+,-,+	KIF2A,DIMT1L,KIF2A	324,98114,324
chr1:26324186-26324446	chr1	+	26324361	26324491	True	NM_000437,NM_004455	chr1,chr1	-,+	PAFAH2,EXTL1	207,23779
chr5:170813514-170814248	chr5	+	170813682	170814270	True	NM_002520,NM_199185,NR_037474,NM_001037738	chr5,chr5,chr5,chr5	+,+,-,+	NPM1,NPM1,MIR3912,NPM1	437,437,82,437
chr2:135810388-135810607	chr2	+	135810388	135810540	True	NM_025052,NM_012233,NM_001172435	chr2,chr2,chr2	-,+,+	YSK4,RAB3GAP1,RAB3GAP1	-28140,-605,-605
chr7:17976992-17978925	chr7	+	17977456	17978962	True	NM_001204144,NM_015132	chr7,chr7	+,-	HDAC9,SNX13	147609,1219
chr17:27345782-27347045	chr17	+	27345905	27347007	True	NM_178860,NM_016518	chr17,chr17	-,+	SEZ6,PIPOX	-12824,22910
chr18:22047801-22048299	chr18	+	22047801	22048037	True	NM_021624,NM_001160166,NM_080597,NM_001143828	chr18,chr18,chr18,chr18	+,+,-,+	HRH4,HRH4,OSBPL1A,HRH4	-7261,-7261,-70011,-7261
chr11:28113003-28113453	chr11	+	28113005	28113368	True	NM_031217,NM_001113528	chr11,chr11	-,+	KIF18A,METTL15	16441,16429
chr4:186873585-186874188	chr4	+	186873612	186874116	True	NM_021069,NM_003265	chr4,chr4	-,+	SORBS2,TLR3	3804,116192
chr10:98030208-98031259	chr10	+	98030560	98031215	True	NM_001017520,NM_001114094,NM_013314	chr10,chr10,chr10	+,-,-	DNTT,BLNK,BLNK	32869,168,168
chr12:122243556-122243761	chr12	+	122243731	122243809	True	NM_015048,NR_002809	chr12,chr12	+,-	SETD1B,LOC338799	-1144,-2341
chr5:9545615-9545859	chr5	+	9545685	9545797	True	NM_003966,NR_003689	chr5,chr5	-,+	SEMA5A,SNORD123	486,3141
chr17:11147781-11148123	chr17	+	11147843	11148145	True	NM_001101387,NM_001173461,NM_001173462,NM_207386	chr17,chr17,chr17,chr17	-,+,+,+	PIRT,SHISA6,SHISA6,SHISA6	-406425,-3154,-3154,-3154
chr2:70485143-70485456	chr2	+	70485368	70485504	True	NM_016297,NM_022173,NM_022037	chr2,chr2,chr2	+,-,-	PCYOX1,TIA1,TIA1	-188,-9589,-9589
chr16:1922423-1922705	chr16	+	1922422	1922673	True	NM_152764,NM_001163560,NM_001142398	chr16,chr16,chr16	-,-,+	C16orf73,C16orf73,FAHD1	-320,-243,-45254
chr1:17766322-17766835	chr1	+	17766454	17766795	True	NM_001136204,NM_018715,NM_207421	chr1,chr1,chr1	-,-,+	RCC2,RCC2,PADI6	-1397,-234,-67764
chr3:146216425-146216628	chr3	+	146216449	146216687	True	NM_003412,NM_001199979	chr3,chr3	+,-	ZIC1,PLSCR2	910493,-2671
chr3:13457895-13459812	chr3	+	13458292	13459795	True	NM_024827,NM_024923	chr3,chr3	+,-	HDAC11,NUP210	61919,2064
chr3:50241538-50242572	chr3	+	50241579	50242485	True	NM_006764,NM_006841	chr3,chr3	-,+	IFRD2,SLC38A3	87591,206
chr2:120300563-120300810	chr2	+	120300653	120300793	True	NM_001029996,NM_002980	chr2,chr2	+,-	PCDP1,SCTR	1231,-18625
chr6:15030044-15031458	chr6	+	15030138	15031136	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	215390,632203
chrX:153169177-153169690	chrX	+	153169203	153169483	True	NM_001164741,NM_001146151,NM_000054,NR_027419	chrX,chrX,chrX,chrX	-,+,+,+	ARHGAP4,AVPR2,AVPR2,AVPR2	22281,1045,1045,-1269
chr10:48953605-48954726	chr10	+	48953720	48954705	True	NR_026566,NM_153034,NR_003611	chr10,chr10,chr10	-,+,-	BMS1P1,ZNF488,BMS1P5	-1091,-598682,-1091
chr10:48953605-48954726	chr10	-	48183623	48184821	False	NM_002900,NR_024495	chr10,chr10	-,+	RBP3,LOC642826	206585,1034
chr10:48953605-48954726	chr10	+	46764617	46764968	False	NR_027632,NR_026566,NR_003611	chr10,chr10,chr10	+,-,-	FAM35B,BMS1P1,BMS1P5	132672,-1725,-1725
chr10:48953605-48954726	chr10	+	47245382	47245733	False	NR_027634,NR_024495	chr10,chr10	+,-	FAM35B2,LOC642826	133986,-1888
chr16:28620065-28621073	chr16	+	28620206	28620816	True	NM_177529,NM_138414,NM_177530,NM_001055,NM_177534	chr16,chr16,chr16,chr16,chr16	-,+,-,-,-	SULT1A1,CCDC101,SULT1A1,SULT1A1,SULT1A1	591,-55008,-47,591,-47
chr16:28620065-28621073	chr16	+	28607281	28607331	False	NM_138414,NM_177528,NM_001054	chr16,chr16,chr16	+,-,-	CCDC101,SULT1A2,SULT1A2	-42083,520,1110
chr20:56303889-56305867	chr20	+	56303938	56305792	True	NM_002591,NM_199171	chr20,chr20	+,-	PCK1,PMEPA1	-167852,-17397
chr12:64785063-64786944	chr12	+	64785284	64786702	True	NM_007235,NM_001170633,NM_001099676	chr12,chr12,chr12	+,-,-	XPOT,C12orf56,C12orf56	11450,-939,-939
chr13:100152167-100153519	chr13	+	100152170	100153437	True	NM_004951,NM_004800	chr13,chr13	-,+	GPR183,TM9SF2	-192421,290
chr2:216004489-216005292	chr2	+	216004623	216005188	True	NM_173076,NM_004044	chr2,chr2	-,+	ABCA12,ATIC	-1472,171490
chr7:6522847-6523063	chr7	+	6522849	6522963	True	NM_006854,NM_001134387,NM_001100603	chr7,chr7,chr7	-,+,-	KDELR2,ZDHHC4,KDELR2	936,94101,936
chr12:110315342-110315543	chr12	+	110315411	110315575	True	NM_016433,NM_001143852	chr12,chr12	-,+	GLTP,TCHP	2768,22503
chr1:210002524-210002986	chr1	+	210002545	210002784	True	NM_006147,NM_014388	chr1,chr1	-,+	IRF6,DIEXF	-23066,-1295
chr14:36296619-36298306	chr14	+	36296709	36298112	True	NM_194301,NM_032352	chr14,chr14	-,+	RALGAPA1,BRMS1L	-18277,-1163
chr12:53731888-53732107	chr12	+	53731950	53732020	True	NM_021640,NM_001173467,NM_152860	chr12,chr12,chr12	+,-,-	C12orf10,SP7,SP7	-38531,-1946,-2413
chr3:129830133-129830347	chr3	+	129830228	129830326	True	NM_001136152,NR_024252	chr3,chr3	+,-	ALG1L2,LOC729375	-29605,0
chr7:6687160-6687731	chr7	+	6687179	6687767	True	NM_017560,NM_006956	chr7,chr7	+,-	ZNF853,ZNF12	-31703,58849
chr13:37004855-37005192	chr13	+	37004860	37005247	True	NM_003914,NM_001142294,NM_001111046,NM_001111047,NM_001111045	chr13,chr13,chr13,chr13,chr13	+,-,+,+,+	CCNA1,SPG20,CCNA1,CCNA1,CCNA1	1161,-60543,719,719,1161
chr4:7042492-7043096	chr4	+	7042626	7043136	True	NM_153376,NM_152293,NR_033828	chr4,chr4,chr4	-,+,-	CCDC96,TADA2B,LOC100129931	1642,2019,4872
chr6:42714377-42714718	chr6	+	42714510	42714760	True	NM_003192,NR_037141	chr6,chr6	-,+	TBCC,LOC442211	-626,-19247
chr13:109910279-109911569	chr13	+	109910610	109911607	True	NM_003749,NM_001198950	chr13,chr13	-,+	IRS2,MYO16	527360,-629090
chr4:41992724-41993018	chr4	+	41992773	41993067	True	NM_006345,NM_001159547,NM_001029955	chr4,chr4,chr4	+,-,+	SLC30A9,BEND4,DCAF4L1	-301,161878,-9111
chr19:13986490-13987401	chr19	+	13986510	13987396	True	NR_030179,NM_001098622,NR_029613,NM_024323	chr19,chr19,chr19,chr19	+,+,+,-	MIR181D,NANOS3,MIR181C,C19orf57	-875,553,-1051,29563
chr11:45865489-45865866	chr11	+	45865675	45865798	True	NM_021117,NM_001080446,NM_001127457	chr11,chr11,chr11	+,-,+	CRY2,C11orf94,CRY2	3158,63096,2870
chr1:237142374-237142694	chr1	+	237142380	237142740	True	NM_001035,NM_018072	chr1,chr1	+,-	RYR2,HEATR1	62961,-374539
chr2:46705348-46706137	chr2	+	46705483	46706175	True	NM_080653,NM_001145051	chr2,chr2	-,+	ATP6V1E2,LOC388946	40971,528
chr12:48154052-48154699	chr12	+	48154082	48154678	True	NM_001098532,NM_001098531,NM_006105,NM_017842	chr12,chr12,chr12,chr12	-,-,-,+	RAPGEF3,RAPGEF3,RAPGEF3,SLC48A1	-1901,-1193,-1838,12288
chr17:62944889-62946240	chr17	+	62944991	62946291	True	NR_026903,NM_001165933	chr17,chr17	-,+	AMZ2P1,RGS9	25468,187164
chr6:26536856-26537159	chr6	+	26536858	26537147	True	NM_006353,NM_024639	chr6,chr6	+,-	HMGN4,ZNF322A	1424,122866
chr22:41682523-41682835	chr22	+	41682522	41682864	True	NM_017590,NM_002883	chr22,chr22	+,-	ZC3H7B,RANGAP1	14702,-306
chr3:56616561-56617901	chr3	+	56616692	56617302	True	NR_024460,NM_015224	chr3,chr3	+,-	CCDC66,C3orf63	-25566,80832
chr14:73707196-73708271	chr14	+	73707451	73708247	True	NM_021260,NM_173462	chr14,chr14	-,+	ZFYVE1,PAPLN	-213531,-3297
chr12:80854423-80855076	chr12	+	80854646	80854964	True	NR_030348,NM_001145026	chr12,chr12	-,+	MIR617,PTPRQ	371503,-16579
chr11:5669590-5671113	chr11	+	5669861	5671161	True	NM_033034,NR_002777	chr11,chr11	-,+	TRIM5,TRIM78P	35230,-5501
chr7:27214658-27214900	chr7	+	27214658	27214948	True	NM_005523,NM_018951,NR_037940,NR_037939,NR_029911,NM_153715,NR_002795,NM_152739	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,-,+,-	HOXA11,HOXA10,HOXA10-HOXA9,HOXA10,MIR196B,HOXA10,HOXA11-AS1,HOXA9	9937,-703,4982,4982,-5476,4978,10078,-9509
chr17:38281918-38282582	chr17	+	38282073	38282611	True	NM_001012241,NM_021724	chr17,chr17	+,-	MSL1,NR1D1	-3334,-25100
chr12:128044468-128046122	chr12	+	128044704	128046082	True	NR_033970,NR_033987	chr12,chr12	-,+	LOC440117,FLJ37505	-685468,320079
chr4:70617463-70619298	chr4	+	70617481	70619339	True	NM_014465,NM_001025104	chr4,chr4	-,+	SULT1B1,CSN1S1	7149,177459
chr19:34663415-34663678	chr19	+	34663429	34663675	True	NM_001114093,NM_015578,NR_027620	chr19,chr19,chr19	+,+,-	LSM14A,LSM14A,LOC643719	-128,-128,404971
chr1:156269958-156270659	chr1	+	156270126	156270542	True	NM_144580,NM_032323,NM_001004319	chr1,chr1,chr1	-,+,-	C1orf85,TMEM79,VHLL	-4677,-16110,-698
chr1:200180122-200181687	chr1	+	200180420	200181727	True	NM_001105517,NM_012482	chr1,chr1	+,-	FAM58B,ZNF281	928,197496
chr22:30901477-30901821	chr22	+	30901517	30901831	True	NM_001161368,NM_174977,NM_016498	chr22,chr22,chr22	-,-,+	SEC14L4,SEC14L4,MTFP1	41,41,-79957
chr8:55047989-55048243	chr8	+	55048016	55048102	True	NM_014175,NM_006330	chr8,chr8	+,-	MRPL15,LYPLA1	-286,-33439
chr1:28052252-28052453	chr1	+	28052285	28052431	True	NM_152660,NM_022873,NM_001143915,NM_001143914,NM_001143913,NM_001143912	chr1,chr1,chr1,chr1,chr1,chr1	+,-,+,+,+,+	FAM76A,IFI6,FAM76A,FAM76A,FAM76A,FAM76A	58,-53561,58,58,58,58
chr9:115097053-115098124	chr9	+	115097072	115097538	True	NM_005156,NM_001163788,NM_001195822,NM_001163790	chr9,chr9,chr9,chr9	-,-,+,-	ROD1,ROD1,HSDL2,ROD1	-1128,-1128,44650,-1128
chr2:120111955-120113353	chr2	+	120112405	120113129	True	NM_001079862,NM_001017927	chr2,chr2	+,-	DBI,C2orf76	11374,11179
chr6:44238903-44240574	chr6	+	44239172	44240492	True	NM_001137560,NM_004556	chr6,chr6	+,-	TMEM151B,NFKBIE	-743,-5647
chr2:170336426-170336835	chr2	+	170336473	170336878	True	NM_152384,NM_024622	chr2,chr2	+,-	BBS5,FASTKD1	-518,93597
chr8:30669764-30669973	chr8	+	30669830	30669960	True	NM_001009552,NM_005671	chr8,chr8	-,+	PPP2CB,UBXN8	442,-68191
chr14:77227705-77228002	chr14	+	77227791	77228031	True	NM_015305,NM_014909	chr14,chr14	-,+	ANGEL1,VASH1	51302,203
chr17:74305359-74306236	chr17	+	74305458	74306042	True	NM_032134,NM_182565	chr17,chr17	-,+	QRICH2,FAM100B	-1697,-44223
chr15:74220327-74220795	chr15	+	74220394	74220772	True	NM_004809,NM_005576	chr15,chr15	-,+	STOML1,LOXL1	63913,-1656
chr1:204007392-204008965	chr1	+	204008168	204008771	True	NM_005686,NR_027902	chr1,chr1	+,-	SOX13,C1orf157	33474,1672
chr3:49026449-49027115	chr3	+	49026666	49027107	True	NM_001009996,NM_177938,NM_177939	chr3,chr3,chr3	-,+,+	DALRD3,P4HTM,P4HTM	28960,233,233
chr19:49244904-49245897	chr19	+	49245039	49245547	True	NM_019113,NM_017805,NM_182575	chr19,chr19,chr19	+,-,-	FGF21,RASIP1,IZUMO1	13796,-1069,4669
chr13:41571685-41573097	chr13	+	41571848	41572949	True	NM_007187,NM_001145353	chr13,chr13	+,-	WBP4,ELF1	62747,-15430
chr2:89003285-89004236	chr2	+	89003546	89004208	True	NM_144563,NM_004836	chr2,chr2	+,-	RPIA,EIF2AK3	-12430,-76452
chrY:21901074-21902792	chrY	+	21901347	21902583	True	NM_032576,NM_001146705,NM_004653,NM_001146706	chrY,chrY,chrY,chrY	+,-,-,-	CYorf15B,KDM5D,KDM5D,KDM5D	-142965,4299,4299,4299
chr14:91284396-91284809	chr14	+	91284549	91284855	True	NM_001010854,NM_001102366	chr14,chr14	-,+	TTC7B,C14orf159	-1788,295501
chr20:30436126-30436649	chr20	+	30436220	30436698	True	NM_004118,NM_001008409	chr20,chr20	-,+	FOXS1,TTLL9	-2800,21806
chr2:175277893-175278409	chr2	+	175277894	175278246	True	NM_024583,NM_004882	chr2,chr2	+,-	SCRN3,CIR1	-17488,-17451
chr22:21772769-21773423	chr22	+	21772828	21773420	True	NM_015094,NR_003700	chr22,chr22	+,-	HIC2,PI4KAP2	-1186,98410
chr22:21772769-21773423	chr22	-	20426071	20426663	False	NR_003563,NR_026919	chr22,chr22	-,+	PI4KAP1,LOC150197	-27376,-232267
chr22:21772769-21773423	chr22	-	21870048	21870640	False	NR_003700,NM_003347	chr22,chr22	-,+	PI4KAP2,UBE2L3	1190,51316
chr10:26217409-26218815	chr10	+	26217730	26218829	True	NM_017433,NR_027333	chr10,chr10	+,-	MYO3A,LOC100128811	4172,-752525
chr3:157260160-157260572	chr3	+	157260227	157260509	True	NR_024016,NM_001130001,NM_001167916,NM_001099777,NM_001130002	chr3,chr3,chr3,chr3,chr3	+,+,-,+,+	C3orf55,C3orf55,VEPH1,C3orf55,C3orf55	649,649,-38812,649,649
chr17:74500282-74501141	chr17	+	74500304	74500507	True	NR_033357,NM_024599	chr17,chr17	+,-	PRCD,RHBDF2	23160,-2795
chr2:115916840-115918199	chr2	+	115916991	115918223	True	NR_036580,NM_001004360,NM_001178034	chr2,chr2,chr2	-,+,+	LOC389023,DPP10,DPP10	747,1460,1289
chr10:88280791-88281016	chr10	+	88280908	88281051	True	NM_015045,NM_001030015	chr10,chr10	-,+	WAPAL,OPN4	540,133262
chr12:128047940-128048227	chr12	+	128047944	128048244	True	NR_033970,NR_033987	chr12,chr12	-,+	LOC440117,FLJ37505	-688708,317917
chr3:45873635-45874144	chr3	+	45873741	45873920	True	NM_020347,NM_006641	chr3,chr3	-,+	LZTFL1,CCR9	9764,54075
chr11:4744589-4745261	chr11	+	4744600	4745246	True	NM_030774,NM_152430	chr11,chr11	-,+	OR51E2,OR51E1	-25524,-79495
chr11:71711131-71711341	chr11	+	71711139	71711257	True	NM_001145055,NM_001145057,NM_001039660,NM_001039659,NR_029192,NM_005699,NM_173042,NM_173044	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,-,+,+,+	IL18BP,IL18BP,IL18BP,IL18BP,LOC100133315,IL18BP,IL18BP,IL18BP	-217,-527,-1232,-1232,-71646,-1081,-1081,-1232
chr3:48700634-48700916	chr3	+	48700638	48700828	True	NM_033629,NM_001407	chr3,chr3	+,-	TREX1,CELSR3	-193460,-290
chr14:39854939-39855239	chr14	+	39854940	39855282	True	NM_203355,NM_203301	chr14,chr14	+,-	CTAGE5,FBXO33	-118673,46472
chr17:77073021-77073563	chr17	+	77073241	77073466	True	NM_138793,NM_001042573	chr17,chr17	-,+	CANT1,ENGASE	-67342,-2273
chr5:139028696-139028906	chr5	+	139028699	139028787	True	NM_016463,NM_198282	chr5,chr5	+,-	CXXC5,TMEM173	-449,-166356
chr1:46914698-46915539	chr1	+	46914767	46915411	True	NM_001097611,NM_001441	chr1,chr1	-,+	KNCN,FAAH	101526,-54879
chr9:97022953-97023193	chr9	+	97022957	97023021	True	NM_194320,NM_017561	chr9,chr9	+,-	ZNF169,FAM22F	-1430,67955
chr12:50134142-50135041	chr12	+	50134159	50135015	True	NM_001098576,NM_198900,NM_003217	chr12,chr12,chr12	+,-,+	TMBIM6,FMNL3,TMBIM6	576,-32962,277
chr14:58619105-58619561	chr14	+	58619184	58619552	True	NM_018477,NM_001001872	chr14,chr14	+,-	ACTR10,C14orf37	47280,-337
chr11:126051191-126051960	chr11	+	126051365	126051998	True	NM_001144827,NM_024556	chr11,chr11	-,+	RPUSD4,FAM118B	29639,29620
chr5:1804602-1805578	chr5	+	1804664	1805530	True	NM_032479,NM_004553	chr5,chr5	-,+	MRPL36,NDUFS6	-4708,-3219
chr12:6898645-6898856	chr12	+	6898686	6898840	True	NM_001195015,NM_001195014,NM_001195017,NM_001195016,NR_026581,NR_036545,NM_000616	chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,+,+,-,+,+	CD4,CD4,CD4,CD4,MLF2,CD4,CD4	-45,-45,-45,-45,-36050,-45,-99
chr16:15069711-15070089	chr16	+	15069922	15070136	True	NM_015027,NM_173474	chr16,chr16	+,-	PDXDC1,NTAN1	-1140,79747
chr16:15069711-15070089	chr16	-	70098599	70098813	False	NR_036265,NR_003610	chr16,chr16	+,-	MIR1972-2,PDXDC2P	-34401,1088
chr1:168265219-168265816	chr1	+	168265224	168265548	True	NR_026844,NM_005149	chr1,chr1	-,+	ANKRD36BP1,TBX19	-48556,-14997
chr1:39491956-39492293	chr1	+	39491982	39492272	True	NM_001184979,NM_017821,NM_004552	chr1,chr1,chr1	+,-,+	NDUFS5,RHBDL2,NDUFS5	-66,-84526,-66
chr8:22089702-22090016	chr8	+	22089720	22089790	True	NM_001722,NM_001099335,NM_014759	chr8,chr8,chr8	+,-,-	POLR3D,PHYHIP,PHYHIP	12828,111,111
chr16:9185811-9186171	chr16	+	9185920	9186132	True	NM_003470,NM_014117	chr16,chr16	-,+	USP7,C16orf72	-128579,-434
chr9:32567247-32567482	chr9	+	32567247	32567323	True	NM_001199987,NM_002493,NR_033992,NM_182739	chr9,chr9,chr9,chr9	-,-,+,-	NDUFB6,NDUFB6,LOC100129250,NDUFB6	5911,5911,-15527,5911
chr12:7056958-7057789	chr12	+	7056970	7057340	True	NM_138425,NM_080548,NM_080549,NR_003010,NM_002831	chr12,chr12,chr12,chr12,chr12	+,+,+,-,+	C12orf57,PTPN6,PTPN6,SCARNA12,PTPN6	-3818,-1281,3093,19479,3093
chr10:118302917-118303295	chr10	+	118303090	118303216	True	NM_000936,NM_144661	chr10,chr10	+,-	PNLIP,C10orf82	2211,126315
chr13:28236092-28236326	chr13	+	28236257	28236380	True	NM_015972,NM_153371	chr13,chr13	+,-	POLR1D,LNX2	-40292,-41537
chr12:42722270-42722994	chr12	+	42722379	42722509	True	NM_016488,NM_001143789,NM_201515,NM_201439,NM_201438,NM_001143788,NM_033114,NM_001143787,NM_201440	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,+,+,+,+,-,+,+	PPHLN1,PPHLN1,PPHLN1,PPHLN1,PPHLN1,PPHLN1,ZCRB1,PPHLN1,PPHLN1	-2494,-2494,-2494,-2494,-2494,-2494,-2447,-2494,-2494
chr1:85156739-85157437	chr1	+	85156753	85157486	True	NR_036561,NM_001166293,NM_001166295,NM_001166294,NM_001166417,NM_014021	chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,-,-,-	SPATA1,SSX2IP,SSX2IP,SSX2IP,SSX2IP,SSX2IP	-184830,-513,-602,-513,-602,-513
chr14:52534796-52535117	chr14	+	52534891	52535069	True	NM_007361,NM_016039	chr14,chr14	-,+	NID2,C14orf166	927,-78714
chr14:74770176-74770596	chr14	+	74770310	74770546	True	NR_003256,NM_018228,NM_005050	chr14,chr14,chr14	-,+,-	ABCD4,VRTN,ABCD4	-543,44619,-543
chr3:79816440-79817230	chr3	+	79816507	79817205	True	NM_001128929,NM_002941	chr3,chr3	+,-	ROBO2,ROBO1	-2669395,92
chr1:247268880-247269341	chr1	+	247269181	247269368	True	NM_024804,NM_001142572,NM_207401,NM_173858	chr1,chr1,chr1,chr1	-,-,-,+	ZNF669,ZNF669,C1orf229,VN1R5	-1507,-1507,6401,150005
chr1:48342385-48343518	chr1	+	48342445	48343194	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	119419,345162
chrX:54557000-54558727	chrX	+	54557027	54558663	True	NM_004463,NM_019067,NM_001184819	chrX,chrX,chrX	-,+,+	FGD1,GNL3L,GNL3L	-34428,-434,-434
chr12:79499582-79499998	chr12	+	79499696	79500014	True	NM_001135806,NM_002583	chr12,chr12	+,-	SYT1,PAWR	-60322,584828
chr6:16763257-16763541	chr6	+	16763377	16763557	True	NM_001128164,NM_001190766,NM_000332	chr6,chr6,chr6	-,+,-	ATXN1,FLJ23152,ATXN1	-1656,338931,-1656
chr6:125327949-125328550	chr6	+	125328194	125328305	True	NR_026876,NM_152553	chr6,chr6	-,+	STL,RNF217	-44021,-23741
chr10:70229856-70230363	chr10	+	70229863	70230233	True	NM_030625,NM_001080449	chr10,chr10	+,-	TET1,DNA2	89883,1549
chr19:44669857-44670610	chr19	+	44669856	44670300	True	NR_033341,NM_001146220,NM_001032373,NM_001032374,NM_015919,NM_001032372	chr19,chr19,chr19,chr19,chr19,chr19	-,+,+,+,+,+	LOC100379224,ZNF226,ZNF226,ZNF226,ZNF226,ZNF226	-52520,-692,-658,-658,-658,-590
chr21:9965948-9966489	chrY	+	13368445	13368495	False	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	1405802,1164944
chr21:9965948-9966489	chr1	+	143465405	143465491	True	NR_033189,NR_027468	chr1,chr1	+,-	LOC100130000,FLJ39739	221638,279016
chr17:4835665-4836276	chr17	+	4835707	4836301	True	NM_000173,NM_001165417,NM_015528,NM_003562,NM_001165418	chr17,chr17,chr17,chr17,chr17	+,-,+,-,-	GP1BA,SLC25A11,RNF167,SLC25A11,SLC25A11	-166,7211,7328,7211,7211
chr9:37798552-37799287	chr9	+	37798807	37799287	True	NM_001002269,NM_024345	chr9,chr9	-,+	EXOSC3,DCAF10	-13740,1502
chr3:33882610-33883021	chr3	+	33882804	33882889	True	NM_015097,NR_027867	chr3,chr3	-,+	CLASP2,PDCD6IP	-122956,-12730
chr19:7004853-7005145	chr19	+	7005045	7005171	True	NR_024372,NM_001136507	chr19,chr19	-,+	FLJ25758,MBD3L5	1305,25422
chr11:67375552-67375910	chr11	+	67375707	67375949	True	NM_007103,NR_033791,NM_001166102	chr11,chr11,chr11	+,-,+	NDUFV1,DOC2GP,NDUFV1	-1437,7236,-1437
chr19:57859575-57860349	chr19	+	57859579	57860222	True	NM_020633,NM_020657	chr19,chr19	-,+	VN1R1,ZNF304	107949,2422
chr4:49311557-49312578	chr4	+	49312547	49312617	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-324333,-403732
chr4:49311557-49312578	chr4	-	49307092	49307162	False	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-318878,-398277
chr4:49311557-49312578	chr4	-	49294657	49294727	False	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-306443,-385842
chr4:49311557-49312578	chr4	-	49300812	49300882	False	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-312598,-391997
chr17:48913822-48914429	chr17	+	48913916	48914470	True	NM_005749,NM_175575	chr17,chr17	-,+	TOB1,WFIKKN2	26993,-1362
chr5:54616201-54617280	chr5	+	54616374	54617139	True	NM_015360,NM_019030	chr5,chr5	+,-	SKIV2L2,DHX29	-12849,-12853
chr1:212611600-212612052	chr1	+	212611599	212611813	True	NR_026598,NM_013349,NM_018252	chr1,chr1,chr1	+,+,-	NENF,NENF,TMEM206	-5421,-5421,-23332
chr16:28877279-28877516	chr16	+	28877290	28877562	True	NM_001145812,NM_001145797,NM_001145796,NM_001145795,NM_015503,NM_003321	chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,-	SH2B1,SH2B1,SH2B1,SH2B1,SH2B1,TUFM	-2045,-2263,-2263,-2263,-2027,-19561
chr20:48533827-48534433	chr20	+	48533869	48534305	True	NM_006038,NM_001135773,NM_018683	chr20,chr20,chr20	-,-,+	SPATA2,SPATA2,RNF114	-1789,-3593,18608
chr3:183748281-183748679	chr3	+	183748419	183748593	True	NM_182537,NM_001023587,NM_001145143,NM_001163646	chr3,chr3,chr3,chr3	+,-,+,+	HTR3D,ABCC5,HTR3D,HTR3D	738,-12692,936,2025
chr2:103236659-103236958	chr2	+	103236675	103237007	True	NM_003048,NM_032718	chr2,chr2	+,-	SLC9A2,MFSD9	-560,116380
chr5:132150268-132150595	chr5	+	132150300	132150644	True	NM_175873,NM_133456	chr5,chr5	+,-	ANKRD43,SHROOM1	-1318,11408
chr5:69434509-69436362	chr5	+	69434511	69436408	True	NM_022877,NR_024054	chr5,chr5	+,-	SMN2,LOC100170939	-89212,85272
chr5:69434509-69436362	chr5	-	21967583	21967641	False	NR_003921,NM_004061	chr5,chr5	+,-	PMCHL1,CDH12	174819,886148
chr5:69434509-69436362	chr5	-	69273429	69275326	False	NM_022968,NR_024054	chr5,chr5	+,-	SERF1A,LOC100170939	45745,246346
chr5:69434509-69436362	chr5	+	70436004	70436722	False	NM_022877,NR_026578	chr5,chr5	+,-	SMN2,LOC647859	-215295,-47107
chr5:69434509-69436362	chr5	-	70148500	70150397	False	NM_022968,NM_004536	chr5,chr5	+,-	SERF1A,NAIP	46092,170594
chr9:103239271-103240067	chr9	+	103239330	103239907	True	NM_003692,NM_017746	chr9,chr9	+,-	TMEFF1,TEX10	-3861,-124071
chr5:168043382-168043616	chr5	+	168043405	168043663	True	NM_024594,NR_031721	chr5,chr5	-,+	PANK3,MIR103-1AS	-36791,-55547
chr5:168043382-168043616	chr19	-	12754626	12754684	False	NM_001099737,NM_000528	chr19,chr19	+,-	WDR83,MAN2B1	22933,22957
chr5:168043382-168043616	chrX	+	153627704	153627852	False	NM_006013,NM_006730,NR_000011,NR_026898	chrX,chrX,chrX,chrX	+,-,+,+	RPL10,DNASE1L1,SNORA70,RPL10	-1274,9863,769,-1274
chr8:26370511-26371127	chr8	+	26370668	26371118	True	NM_001197293,NM_007257	chr8,chr8	+,-	DPYSL2,PNMA2	590,415
chr1:203475370-203475933	chr1	+	203475640	203475858	True	NM_002023,NM_014359	chr1,chr1	-,+	FMOD,OPTC	-155351,-12420
chr2:202210742-202211205	chr2	+	202210905	202211047	True	NM_001127391,NM_033356	chr2,chr2	-,+	ALS2CR12,CASP8	11104,-85740
chr2:18060119-18060488	chr2	+	18060203	18060363	True	NM_024624,NM_002252	chr2,chr2	-,+	SMC6,KCNS3	-125107,-309
chr16:1965928-1966420	chr16	+	1966057	1966305	True	NM_001009606,NM_004548	chr16,chr16	-,+	HS3ST6,NDUFB10	1976,43211
chr15:85358287-85358593	chr15	+	85358286	85358507	True	NM_014300,NM_020778	chr15,chr15	-,+	SEC11A,ALPK3	-98612,1403
chr16:31179218-31179617	chr16	+	31179344	31179521	True	NM_173502,NM_001170634	chr16,chr16	-,+	PRSS36,FUS	-17929,11909
chr9:10612907-10613107	chr9	+	10612960	10613098	True	NM_000550,NM_002839	chr9,chr9	+,-	TYRP1,PTPRD	2080287,-237
chr17:72319602-72321003	chr17	+	72319810	72320757	True	NM_153209,NM_001080466	chr17,chr17	+,-	KIF19,BTBD17	1593,37251
chr3:122302759-122303515	chr3	+	122302834	122303317	True	NM_031458,NM_001113523	chr3,chr3	-,+	PARP9,PARP15	-19311,-6436
chr10:105156388-105156610	chr10	+	105156392	105156598	True	NM_014976,NR_031707,NM_032747	chr10,chr10,chr10	+,-,-	PDCD11,MIR1307,USMG5	-31,-2234,-169
chr3:149689264-149689476	chr3	+	149689267	149689457	True	NM_053024,NM_002628,NR_036538	chr3,chr3,chr3	-,-,+	PFN2,PFN2,LOC646903	-526,-526,-252
chr5:22844210-22845140	chr5	+	22844210	22845040	True	NM_020227,NM_004061	chr5,chr5	+,-	PRDM9,CDH12	662683,8741
chr1:27304870-27305095	chr1	+	27304973	27305081	True	NM_152365,NM_001013642	chr1,chr1	-,+	C1orf172,TRNP1	-18072,15113
chr7:24612143-24612374	chr7	+	24612147	24612395	True	NM_016447,NM_001127453	chr7,chr7	+,-	MPP6,DFNA5	689,184738
chr11:10479357-10480911	chr11	+	10479450	10480950	True	NM_001025390,NM_001025389,NM_000480,NM_001172430,NM_001172431,NM_001190702	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,-	AMPD3,AMPD3,AMPD3,AMPD3,AMPD3,MTRNR2L8	-2020,-2835,-7277,1727,-7633,49823
chr1:92103278-92104141	chr1	+	92103553	92103659	True	NM_001017975,NR_003130	chr1,chr1	-,+	HFM1,HSP90B3P	-233127,-3048
chr4:25159460-25161248	chr4	+	25159697	25160908	True	NR_037934,NM_016955	chr4,chr4	+,-	LOC285540,SEPSECS	1385,1355
chr13:46172569-46172995	chr13	+	46172603	46173009	True	NM_182542,NM_152719	chr13,chr13	-,+	FAM194B,SPERT	16915,103436
chr12:110908062-110908814	chr12	+	110908148	110908626	True	NM_013300,NM_016301,NM_001164372,NM_001164373	chr12,chr12,chr12,chr12	+,-,-,-	C12orf24,GPN3,GPN3,GPN3	-1967,-2059,-1622,-2059
chr7:75119415-75121367	chr7	+	75119634	75121362	True	NM_001099415,NM_001099435	chr7,chr7	-,+	POM121C,SPDYE5	-4066,2936
chr7:75119415-75121367	chr7	-	102000121	102000174	False	NM_024653,NM_001146210	chr7,chr7	+,-	PRKRIP1,SPDYE6	36629,-3232
chr7:75119415-75121367	chr7	+	66740806	66740880	False	NM_022906,NR_022007	chr7,chr7	+,-	STAG3L4,PMS2P4	26735,26576
chr7:75119415-75121367	chr7	-	76173668	76174580	False	NR_029411,NR_003262	chr7,chr7	+,-	LOC100133091,FDPSL2A	4077,-69351
chr7:75119415-75121367	chr7	-	72344095	72345848	False	NR_003666,NM_172020	chr7,chr7	-,+	SPDYE7P,POM121	-4440,4087
chr13:27996798-27997536	chr13	+	27996995	27997547	True	NM_002097,NM_001166262	chr13,chr13	+,-	GTF3A,MTIF3	1133,26829
chr6:144222837-144224540	chr6	+	144222900	144224551	True	NM_001013623,NM_001080952	chr6,chr6	+,-	C6orf94,PLAGL1	-37378,105047
chr1:23886189-23887048	chr1	+	23886317	23887083	True	NM_002167,NR_027042	chr1,chr1	-,+	ID3,MDS2	5,66740
chr12:121788971-121789553	chr12	+	121789201	121789601	True	NM_001137559,NM_016237,NM_025126	chr12,chr12,chr12	-,-,+	ANAPC5,ANAPC5,RNF34	2461,714,48300
chr6:11114103-11115126	chr6	+	11114143	11114651	True	NM_001135575,NM_207582	chr6,chr6	+,-	LOC221710,ERVFRDE1	-19933,-2072
chr4:76440605-76442049	chr4	+	76440675	76442062	True	NM_001009922,NR_037913,NR_037914,NM_001008925,NM_015436,NM_144721	chr4,chr4,chr4,chr4,chr4,chr4	-,-,-,-,-,+	RCHY1,RCHY1,RCHY1,RCHY1,RCHY1,THAP6	-1035,-1035,-1035,-1035,-1035,-1072
chr20:19738648-19738885	chr20	+	19738651	19738803	True	NM_016652,NM_018993	chr20,chr20	-,+	CRNKL1,RIN2	297937,131406
chr6:11112575-11114103	chr6	+	11112970	11113543	True	NM_001135575,NM_207582	chr6,chr6	+,-	LOC221710,ERVFRDE1	-18765,-899
chr7:101466748-101467886	chr7	+	101466787	101467866	True	NM_181552,NM_138403,NM_001913,NM_001202543,NM_001202546,NM_001202544,NM_001202545,NM_181500	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,-,+,+,+,+,+,+	CUX1,MYL10,CUX1,CUX1,CUX1,CUX1,CUX1,CUX1	-5956,-194211,-7654,-7654,-7550,-7654,-7654,-7654
chr10:104515724-104516089	chr10	+	104515803	104515872	True	NM_004311,NM_001083913	chr10,chr10	-,+	ARL3,C10orf26	-41613,-12136
chr2:218930591-218931857	chr2	+	218931319	218931877	True	NM_198483,NR_002712	chr2,chr2	+,-	RUFY4,CXCR2P1	1860,-5306
chr10:73721297-73722623	chr10	+	73721306	73722586	True	NM_002778,NM_004273	chr10,chr10	-,+	PSAP,CHST3	-110224,1533
chr4:78427828-78429083	chr4	+	78428213	78429127	True	NM_144571,NM_006419	chr4,chr4	-,+	CNOT6L,CXCL13	311467,3779
chr12:33139850-33140102	chr12	+	33139873	33139959	True	NM_004572,NM_012063	chr12,chr12	-,+	PKP2,DNM1L	-90093,-307787
chr2:238877330-238878727	chr2	+	238877423	238878505	True	NM_080678,NR_037904,NM_030768	chr2,chr2,chr2	+,+,-	UBE2F,UBE2F-SCLY,ILKAP	-1887,-1887,233869
chr1:19923996-19925762	chr1	+	19924059	19925205	True	NM_001204083,NM_001204082,NM_001032363,NM_001204089,NM_001204088,NR_033757,NR_033758,NM_004930	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,+,+,-	C1orf151,C1orf151,C1orf151,C1orf15-NBL1,C1orf15-NBL1,C1orf151,C1orf151,CAPZB	-639,-639,-639,-639,-639,-639,-639,-111993
chr3:155573980-155574976	chr3	+	155574046	155574696	True	NM_001190992,NM_004733,NM_003875	chr3,chr3,chr3	-,-,+	SLC33A1,SLC33A1,GMPS	-1798,-1798,13628
chr19:38720468-38721928	chr19	+	38720664	38721964	True	NM_001135156,NM_004647,NM_001135155,NM_001166103	chr19,chr19,chr19,chr19	-,-,-,+	DPF1,DPF1,DPF1,SPINT2	-347,-5774,-5774,33133
chr12:106522697-106523992	chr12	+	106522750	106523614	True	NM_014840,NM_152772	chr12,chr12	-,+	NUAK1,TCP11L2	10255,172966
chr1:48381276-48381478	chr1	+	48381280	48381392	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	81220,306964
chr11:67797298-67797697	chr11	+	67797606	67797728	True	NM_030930,NM_006019,NM_002496	chr11,chr11,chr11	-,+,+	UNC93B1,TCIRG1,NDUFS8	-26013,8733,355
chr13:74710483-74712158	chr13	+	74710531	74711854	True	NR_034024,NM_007249	chr13,chr13	+,-	LOC338864,KLF12	415125,-2465
chr1:158146402-158146889	chr1	+	158146585	158146829	True	NR_033946,NM_001766	chr1,chr1	-,+	LOC646268,CD1D	-36155,2907
chrX:149625102-149625964	chrX	+	149625168	149625942	True	NM_005491,NM_001184808	chrX,chrX	+,-	MAMLD1,CD99L2	-11499,441397
chr2:74151802-74153007	chr2	+	74152161	74153001	True	NM_080918,NM_003584,NM_080916	chr2,chr2,chr2	+,-,+	DGUOK,DUSP11,DGUOK	951,-144877,951
chr1:57039795-57040086	chr1	+	57039891	57039975	True	NM_003713,NM_006252	chr1,chr1	-,+	PPAP2B,PRKAA2	5334,71014
chr13:92091401-92093007	chr13	+	92091543	92093055	True	NR_027039,NM_004466	chr13,chr13	-,+	LOC144776,GPC5	-512692,-40659
chr4:57843667-57844063	chr4	+	57843795	57844065	True	NM_032313,NM_000938	chr4,chr4	-,+	C4orf14,POLR2B	-23,1043
chr12:20960780-20962345	chr12	+	20961123	20962388	True	NM_019844,NM_021094	chr12,chr12	+,-	SLCO1B3,SLCO1A2	1249,525498
chr2:56150599-56150865	chr2	+	56150630	56150696	True	NM_001080433,NM_001039348,NM_001039349	chr2,chr2,chr2	+,-,-	CCDC85A,EFEMP1,EFEMP1	260561,652,652
chr5:1549571-1549807	chr5	+	1549585	1549733	True	NM_024830,NM_004553	chr5,chr5	-,+	LPCAT1,NDUFS6	-25509,251762
chr21:45933888-45934167	chr21	+	45933925	45934181	True	NR_026548,NR_026547,NM_198691	chr21,chr21,chr21	+,+,-	C21orf90,C21orf90,KRTAP10-1	2916,2916,25947
chr1:182814233-182815462	chr1	+	182814386	182815323	True	NM_030933,NM_001357,NR_033302	chr1,chr1,chr1	-,+,+	SHCBP1L,DHX9,DHX9	107282,-6010,-6010
chrX:69643311-69643534	chrX	+	69643353	69643553	True	NM_001171192,NM_001171193,NM_017711,NM_001171191,NM_016484	chrX,chrX,chrX,chrX,chrX	+,+,+,+,-	GDPD2,GDPD2,GDPD2,GDPD2,PDZD11	-523,-523,-523,-523,-133555
chr6:2841417-2841819	chr6	+	2841469	2841789	True	NM_130395,NM_030666	chr6,chr6	+,-	WRNIP1,SERPINB1	-75854,342
chr4:21950751-21950970	chr4	+	21950880	21951016	True	NM_001128432,NM_147182	chr4,chr4	+,-	GBA3,KCNIP4	743531,-506
chr17:71636319-71636567	chr17	+	71636319	71636569	True	NM_001144952,NM_017941	chr17,chr17	-,+	SDK2,C17orf80	3708,-407594
chr9:98782671-98783224	chr9	+	98782689	98783207	True	NR_033838,NR_024129	chr9,chr9	+,-	LOC158435,NCRNA00092	44913,880
chr18:11376061-11377524	chr18	+	11376224	11377352	True	NM_022068,NM_182978	chr18,chr18	-,+	FAM38B,GNAL	-227463,311783
chr22:50175299-50175544	chr22	+	50175381	50175525	True	NM_014838,NR_026993	chr22,chr22	+,-	ZBED4,LOC90834	71971,-1423
chr19:42638137-42638536	chr19	+	42638138	42638458	True	NM_022752,NM_002698,NR_036208	chr19,chr19,chr19	+,-,-	ZNF574,POU2F2,MIR4323	-57899,-1508,-473
chr8:143783318-143784769	chr8	+	143783697	143784665	True	NM_017527,NM_003724,NM_001160354,NM_001160355	chr8,chr8,chr8,chr8	+,-,+,+	LY6K,JRK,LY6K,LY6K	-2226,-32296,-2226,-2226
chr6:90535779-90536365	chr6	+	90536012	90536268	True	NM_001137667,NM_014611,NM_001137668,NM_012115	chr6,chr6,chr6,chr6	+,-,+,+	CASP8AP2,MDN1,CASP8AP2,CASP8AP2	3350,-6570,3350,3350
chr7:99768227-99768944	chr7	+	99768490	99768932	True	NM_024637,NM_152742,NM_012447	chr7,chr7,chr7	-,-,+	GAL3ST4,GPC2,STAG3	-2117,6108,6605
chr14:68157439-68159284	chr14	+	68157698	68159218	True	NM_016026,NM_152443	chr14,chr14	-,+	RDH11,RDH12	3342,9384
chr19:7700436-7701352	chr19	+	7700656	7701358	True	NM_006949,NR_033242,NM_020196,NM_174895,NM_001127396,NM_001171155	chr19,chr19,chr19,chr19,chr19,chr19	+,+,-,-,+,+	STXBP2,LOC100131801,XAB2,PCP2,STXBP2,LOC100131801	632,-6036,-6217,-2086,632,-6036
chr19:15529523-15529763	chr19	+	15529540	15529812	True	NM_014371,NR_031716	chr19,chr19	-,+	AKAP8L,MIR1470	71,30546
chr9:87283637-87283908	chr9	+	87283753	87283945	True	NM_006180,NM_022127,NM_001007097,NM_001018064,NM_001018065,NM_001018066	chr9,chr9,chr9,chr9,chr9,chr9	+,-,+,+,+,+	NTRK2,SLC28A3,NTRK2,NTRK2,NTRK2,NTRK2	-338,-300340,680,-338,649,649
chr17:76218668-76219644	chr17	+	76218972	76219624	True	NR_002219,NM_001168,NM_001012271,NM_001012270,NM_001204210,NM_001204211,NM_001204212	chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,+,+,+,+,+	EPR1,BIRC5,BIRC5,BIRC5,TMEM235,TMEM235,TMEM235	1209,-8746,-8746,-8746,7766,7766,7766
chr12:9313365-9314649	chr12	+	9313561	9314543	True	NM_000014,NR_036466	chr12,chr12	-,+	A2M,LOC100499405	-45003,78055
chr14:59934725-59936195	chr14	+	59934989	59935959	True	NM_022571,NM_001098625	chr14,chr14	-,+	GPR135,JKAMP	-2930,15201
chr15:35591190-35591450	chr15	+	35591190	35591488	True	NR_003144,NR_037507	chr15,chr15	+,-	LOC723972,MIR3942	-61714,73127
chr2:217476911-217478204	chr2	+	217477179	217478235	True	NM_000597,NM_000599	chr2,chr2	+,-	IGFBP2,IGFBP5	19891,82087
chr1:159798211-159798895	chr1	+	159798211	159798877	True	NM_001134233,NM_020125	chr1,chr1	-,+	C1orf204,SLAMF8	26320,-1783
chr1:117753676-117754795	chr1	+	117754002	117754786	True	NM_024626,NR_030640	chr1,chr1	-,+	VTCN1,MIR942	-453,-116788
chr6:31774798-31775382	chr6_qbl_hap6	+	3068516	3068592	False	NM_005345,NM_005527,NM_021177	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	+,-,-	HSPA1A,HSPA1L,LSM2	8345,7940,-136
chr6:31774798-31775382	chr6_dbb_hap3	+	3060462	3060538	False	NM_005345,NM_005527,NM_021177	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	+,-,-	HSPA1A,HSPA1L,LSM2	8339,7934,-136
chr6:31774798-31775382	chr6	+	31774879	31774955	True	NM_005345,NM_005527,NM_021177	chr6,chr6,chr6	+,-,-	HSPA1A,HSPA1L,LSM2	8335,7930,-136
chr6:31774798-31775382	chr6_apd_hap1	+	3089630	3089706	False	NM_005345,NM_005527,NM_021177	chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1	+,-,-	HSPA1A,HSPA1L,LSM2	8345,7940,-136
chr6:31774798-31775382	chr6_cox_hap2	+	3284450	3284526	False	NM_005345,NM_005527,NM_021177	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,-,-	HSPA1A,HSPA1L,LSM2	8344,7939,-136
chr11:60971529-60973183	chr11	+	60972162	60972930	True	NM_001079807,NM_017966	chr11,chr11	+,-	PGA3,VPS37C	-1229,-43246
chr8:90712744-90713362	chr8	+	90712768	90713318	True	NM_002485,NM_003821	chr8,chr8	-,+	NBN,RIPK2	283631,56656
chr6:33359954-33361614	chr6_qbl_hap6	+	4592248	4593445	False	NM_001350	chr6_qbl_hap6	-	DAXX	-69206
chr6:33359954-33361614	chr6	+	33360021	33361215	True	NM_001014433,NM_002263	chr6,chr6	-,+	CUTA,KIFC1	24906,-760
chr6:33359954-33361614	chr6_ssto_hap7	+	4840237	4841434	False	NM_001014433,NM_002263	chr6_ssto_hap7,chr6_ssto_hap7	-,+	CUTA,KIFC1	24933,-760
chrX:40794435-40794760	chrX	+	40794463	40794781	True	NR_027761,NM_001039590	chrX,chrX	-,+	LOC100132831,USP9X	-102014,150106
chr12:53603598-53604153	chr12	+	53603734	53604164	True	NM_001004304,NM_000889	chr12,chr12	+,-	ZNF740,ITGB7	-29250,-2734
chr14:104388557-104388830	chr14	+	104388556	104388634	True	NM_001127393,NM_153046,NM_004894	chr14,chr14,chr14	-,+,-	C14orf2,TDRD9,C14orf2	-653,6182,-653
chr20:42987104-42987593	chr20	+	42987317	42987641	True	NM_001080472,NM_001030003,NM_001030004,NM_175914	chr20,chr20,chr20,chr20	-,+,+,+	FITM2,HNF4A,HNF4A,HNF4A	-47428,-2931,-2931,-2931
chr17:27405125-27406699	chr17	+	27405335	27406477	True	NM_016518,NM_004740	chr17,chr17	+,-	PIPOX,TIAF1	-35468,-2708
chr1:3373165-3373403	chr1	+	3373202	3373414	True	NR_030277,NM_014448	chr1,chr1	-,+	MIR551A,ARHGEF16	103990,-2106
chr19:39826270-39826476	chr19	+	39826276	39826472	True	NM_018028,NM_004877	chr19,chr19	+,-	SAMD4B,GMFG	6635,304
chr10:121632997-121634136	chr10	+	121633083	121633849	True	NM_024834,NM_007190	chr10,chr10	-,+	MCMBP,SEC23IP	-689,18235
chr10:690981-692437	chr10	+	691064	691986	True	NR_027152,NR_027151,NM_014974	chr10,chr10,chr10	+,+,-	C10orf108,C10orf108,DIP2C	4030,3901,43680
chr6:90140973-90141278	chr6	+	90141068	90141208	True	NM_021244,NM_014942	chr6,chr6	-,+	RRAGD,ANKRD6	-19073,1688
chr16:30066297-30066544	chr16	+	30066300	30066491	True	NM_000034,NM_001127617,NM_031478,NM_184043	chr16,chr16,chr16,chr16	+,+,-,+	ALDOA,ALDOA,FAM57B,ALDOA	-1860,9481,-24114,9108
chr11:1037981-1038239	chr11	+	1037995	1038118	True	NM_002457,NM_005961	chr11,chr11	+,-	MUC2,MUC6	36756,-1289
chr4:77870026-77870464	chr4	+	77870169	77870409	True	NM_001029870,NM_018243	chr4,chr4	-,+	ANKRD56,SEPT11	-51167,485
chr17:43341103-43341891	chr17	+	43341126	43341724	True	NR_024435,NM_152343	chr17,chr17	+,-	LOC100133991,C17orf46	-1619,-1647
chr7:135635808-135636360	chr7	+	135635837	135636390	True	NM_001130929,NM_001128619	chr7,chr7	+,-	PL-5283,LUZP6	-288667,25864
chr19:53696192-53696495	chr19	+	53696253	53696467	True	NM_024733,NM_173856	chr19,chr19	-,+	ZNF665,VN1R2	202,65077
chr11:62648040-62648316	chr11	+	62648158	62648262	True	NR_037193,NR_003098,NM_001013251	chr11,chr11,chr11	+,-,+	SLC3A2,SNHG1,SLC3A2	908,-24798,81
chr13:79179800-79181330	chr13	+	79180086	79181373	True	NM_006237,NM_144595	chr13,chr13	-,+	POU4F1,SLAIN1	-2391,-864842
chr2:233925344-233925982	chr2	+	233925382	233925848	True	NM_001017915,NM_005541,NM_019850	chr2,chr2,chr2	+,+,-	INPP5D,INPP5D,NGEF	-397,-397,-47431
chr2:152118395-152119358	chr2	+	152118523	152119229	True	NM_007115,NM_198557	chr2,chr2	+,-	TNFAIP6,RBM43	94876,-134
chr12:52606659-52607018	chr12	+	52606740	52606986	True	NM_182507,NR_027358	chr12,chr12	-,+	KRT80,LOC283404	-20956,-2077
chr20:24913590-24914112	chr20	+	24913654	24914108	True	NM_003650,NM_020531	chr20,chr20	+,-	CST7,C20orf3	15757,59367
chr5:1525270-1526253	chr5	+	1525527	1526287	True	NM_024830,NM_004553	chr5,chr5	-,+	LPCAT1,NDUFS6	-1451,275208
chr10:103450975-103452475	chr10	+	103451053	103452199	True	NR_036114,NM_022039	chr10,chr10	+,-	MIR3158-1,FBXW4	-89931,2603
chrY:19883131-19883438	chrY	+	19883146	19883418	True	NM_004677,NM_004825,NM_001002906	chrY,chrY,chrY	-,+,-	XKRY,CDY2A,XKRY2	-706,254248,-706
chrY:19883131-19883438	chrY	-	20296356	20296628	False	NM_004677,NM_001002906,NR_028083	chrY,chrY,chrY	+,+,-	XKRY,XKRY2,FAM41AY1	706,706,270354
chr17:8056450-8057191	chr17	+	8056460	8057158	True	NM_002616,NR_037447,NM_014232	chr17,chr17,chr17	-,+,-	PER1,MIR3676,VAMP2	-707,33334,9192
chr1:85463478-85463887	chr1	+	85463655	85463909	True	NM_145172,NM_153259	chr1,chr1	+,-	WDR63,MCOLN2	64083,-859
chr17:79609398-79609897	chr17	+	79609463	79609871	True	NM_017921,NM_031945	chr17,chr17	-,+	NPLOC4,TSPAN10	-5325,-165
chr12:18449337-18449902	chr12	+	18449337	18449949	True	NM_004570,NM_024730	chr12,chr12	+,-	PIK3C2G,RERGL	-34914,-206223
chr19:51523210-51523925	chr19	+	51523290	51523914	True	NM_002776,NM_001136032,NM_145888,NM_001077500,NM_001167605,NM_006853,NM_144947,NM_014441	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,+	KLK10,KLK11,KLK10,KLK10,KLK11,KLK11,KLK11,SIGLEC9	-8,6008,-336,29,7426,7426,7021,104222
chr2:7006303-7007173	chr2	+	7006306	7007226	True	NM_207315,NM_080657	chr2,chr2	-,+	CMPK2,RSAD2	-370,10569
chr19:52874719-52875834	chr19	+	52874930	52875885	True	NM_001102657,NM_001145434	chr19,chr19	-,+	ZNF836,ZNF880	-200034,-1812
chr16:3996697-3997293	chr16	+	3996697	3997335	True	NM_005223,NM_004380	chr16,chr16	+,-	DNASE1,CREBBP	-293810,-66576
chr17:74258222-74258797	chr17	+	74258227	74258829	True	NM_052916,NM_182565	chr17,chr17	-,+	RNF157,FAM100B	-21837,2456
chr19:42498752-42499770	chr19	+	42498944	42499634	True	NM_152296,NM_022752	chr19,chr19	-,+	ATP1A3,ZNF574	-562,80655
chr11:60635144-60637113	chr11	+	60635941	60637103	True	NM_004778,NM_207341	chr11,chr11	-,+	GPR44,ZP1	-12497,-977
chrX:2881300-2882952	chrX	+	2881367	2882740	True	NM_000047,NM_001011719	chrX,chrX	-,+	ARSE,ARSH	-140,41913
chr19:39696466-39696839	chr19	+	39696766	39696888	True	NM_001080468,NM_001001414	chr19,chr19	-,+	SYCN,NCCRP1	-1860,-9217
chr10:86320124-86320681	chr7	-	98015683	98015742	False	NM_001159491,NM_018842	chr7,chr7	+,-	BRI3,BAIAP2L1	-104764,14744
chr10:86320124-86320681	chr5	-	78580528	78580587	False	NM_013391,NM_152405	chr5,chr5	-,+	DMGDH,JMY	-215079,-48663
chr10:86320124-86320681	chr5	-	110528527	110528586	True	NM_001744,NM_139164	chr5,chr5	+,-	CAMK4,STARD4	31360,319630
chr14:92412774-92413631	chr14	+	92412935	92413610	True	NM_006329,NM_017437	chr14,chr14	-,+	FBLN5,CPSF2	486,174687
chr14:20103996-20105322	chr10	-	81895403	81895460	False	NM_001012973,NR_027432	chr10,chr10	+,-	PLAC9,LOC219347	-3203,-56454
chr14:20103996-20105322	chr22	+	16371726	16372896	False	NM_001005239,NR_001591	chr22,chr22	-,+	OR11H1,psiTPTE22	76959,709904
chr14:20103996-20105322	chr2	+	130688914	130689699	True	NR_026740,NM_032144	chr2,chr2	-,+	LOC389033,RAB6C	2249,47535
chr19:51585940-51586878	chr19	+	51586140	51586912	True	NM_022046,NM_014441	chr19,chr19	-,+	KLK14,SIGLEC9	640,41224
chr20:18567382-18568380	chr20	+	18567657	18568317	True	NM_006606,NM_080820	chr20,chr20	-,+	RBBP9,DTD1	-89770,238
chr17:7609295-7609638	chr17	+	7609366	7609629	True	NM_001126114,NM_001406	chr17,chr17	-,+	TP53,EFNB3	-18503,-897
chr16:57660876-57661204	chr16	+	57660961	57661229	True	NM_001145771,NM_001145770,NM_001145773,NM_001145772,NM_033212,NM_201525,NM_201524,NM_005682	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,-,+,+,+	GPR56,GPR56,GPR56,GPR56,CCDC102A,GPR56,GPR56,GPR56	1189,-7102,1189,1189,-90484,1189,1189,-7102
chr22:39099950-39100401	chr22	+	39099952	39100280	True	NM_014876,NM_004286	chr22,chr22	-,+	JOSD1,GTPBP1	-3493,1526
chr5:157158407-157158624	chr5	+	157158459	157158655	True	NM_017872,NM_178424	chr5,chr5	+,-	THG1L,SOX30	-187,-79031
chr10:118896114-118896454	chr10	+	118896289	118896407	True	NM_001112704,NM_199131,NM_181840	chr10,chr10,chr10	-,-,+	VAX1,VAX1,KCNK18	1455,1455,60592
chr10:5709399-5709864	chr10	+	5709462	5709882	True	NM_024701,NR_024581,NM_017782,NR_037164	chr10,chr10,chr10,chr10	-,-,+,-	ASB13,ASB13,C10orf18,ASB13	-904,-904,16918,-904
chr10:94050575-94050779	chr10	+	94050615	94050749	True	NM_017824,NM_014912	chr10,chr10	+,-	MARCH5,CPEB3	170,176
chr10:123751153-123751602	chr10	+	123751157	123751353	True	NM_017615,NM_206861,NM_206862	chr10,chr10,chr10	-,+,+	NSMCE4A,TACC2,TACC2	-16414,-2520,-2520
chr16:49411205-49412244	chr16	+	49411463	49412065	True	NM_144602,NM_004352	chr16,chr16	+,-	C16orf78,CBLN1	-3706,-95721
chr4:968671-969340	chr4	+	968871	969047	True	NM_000203,NM_001347	chr4,chr4	+,-	IDUA,DGKQ	11737,-1527
chr10:12236231-12236467	chr10	+	12236231	12236507	True	NM_014142,NM_006023	chr10,chr10	-,+	NUDT5,CDC123	1686,1453
chr5:179071113-179071506	chr5	+	179071138	179071346	True	NM_001024649,NM_001142306	chr5,chr5	+,-	CANX,C5orf60	54583,751
chr5:179071113-179071506	chr5	-	178950233	178950366	False	NM_005520,NM_025158	chr5,chr5	-,+	HNRNPH1,RUFY1	100406,27204
chr4:489760-490592	chr4	+	489765	490266	True	NM_133474,NM_001127178,NM_017733	chr4,chr4,chr4	-,+,+	ZNF721,PIGG,PIGG	3226,2722,2722
chr2:85838218-85838543	chr2	+	85838367	85838535	True	NR_033179,NM_006590,NM_001013649,NM_001031738	chr2,chr2,chr2,chr2	-,+,-,-	TMEM150A,USP39,C2orf68,TMEM150A	-8545,4747,694,-8545
chr6:106959814-106960030	chr6	+	106959821	106960079	True	NM_032730,NM_001624	chr6,chr6	-,+	RTN4IP1,AIM1	117344,-142
chr14:81685957-81686516	chr14	+	81685994	81686398	True	NM_201595,NM_015859,NM_000369	chr14,chr14,chr14	-,-,+	GTF2A1,GTF2A1,TSHR	1227,946,-264176
chr17:43662799-43663135	chr17	+	43662868	43662938	True	NR_026901,NR_037772	chr17,chr17	-,+	LOC644172,CRHR1	16860,34771
chrX:44702228-44703175	chrX	+	44702606	44703218	True	NM_022076,NM_173794	chrX,chrX	+,-	DUSP21,FUNDC1	30,-300385
chr20:35968380-35968923	chr20	+	35968614	35968866	True	NM_198291,NM_021081,NM_005417	chr20,chr20,chr20	+,-,+	SRC,GHRH,SRC	5690,-83315,4221
chr11:117945181-117945632	chr11	+	117945476	117945674	True	NM_001173551,NM_001173552,NM_001142349,NM_001083947,NM_019894	chr11,chr11,chr11,chr11,chr11	+,+,-,+,+	TMPRSS4,TMPRSS4,SCN4B,TMPRSS4,TMPRSS4	2052,2052,70560,2052,2052
chr1:12040961-12041281	chr1	+	12040980	12041232	True	NM_001127660,NM_014874,NM_138346	chr1,chr1,chr1	+,+,-	MFN2,MFN2,KIAA2013	-793,-793,-54495
chr3:36946701-36947134	chr3	+	36946829	36947183	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	39415,87657
chr13:32433859-32435311	chr13	+	32433897	32435351	True	NR_027062,NM_001136571	chr13,chr13	+,-	EEF1DP3,ZAR1L	-13029,450793
chr12:20871756-20872745	chr12	+	20871943	20872787	True	NM_021094,NM_017435	chr12,chr12	-,+	SLCO1A2,SLCO1C1	615095,-23596
chr12:40019530-40019947	chr12	+	40019536	40019922	True	NM_001031748,NM_005164	chr12,chr12	+,-	C12orf40,ABCD2	49,-5693
chr1:153325123-153326485	chr1	+	153325235	153326378	True	NM_020393,NM_002965	chr1,chr1	-,+	PGLYRP4,S100A9	-4213,3951
chr16:47005778-47006518	chr16	+	47005983	47006553	True	NM_005880,NM_001142466	chr16,chr16	-,+	DNAJA2,GPT2	1122,-86938
chrX:70323504-70324146	chrX	+	70323619	70323971	True	NM_005938,NM_001170931,NR_033212,NM_000206,NM_001025265	chrX,chrX,chrX,chrX,chrX	+,+,-,-,-	FOXO4,FOXO4,CXorf65,IL2RG,CXorf65	-7671,-7671,2719,7562,2719
chr22:41033617-41033957	chr22	+	41033747	41033885	True	NM_020831,NM_005297	chr22,chr22	-,+	MKL1,MCHR1	-1057,41296
chr5:162890659-162891341	chr5	+	162890659	162891229	True	NM_012484,NM_012485,NM_145266,NM_001142556,NM_001142557	chr5,chr5,chr5,chr5,chr5	+,+,-,+,+	HMMR,HMMR,NUDCD2,HMMR,HMMR	-3202,-3202,-3516,-3202,-3202
chr6:74019514-74019810	chr6	+	74019523	74019815	True	NM_001017361,NR_027005	chr6,chr6	+,-	C6orf221,C6orf147	52584,323
chr16:31533864-31535200	chr16	+	31533980	31534942	True	NM_022744,NM_016633	chr16,chr16	-,+	C16orf58,AHSP	-14274,4260
chr21:47515992-47516395	chr21	+	47516006	47516414	True	NM_001849,NM_058174,NM_058175,NM_006657	chr21,chr21,chr21,chr21	+,+,+,-	COL6A2,COL6A2,COL6A2,FTCD	1618,1618,1618,59117
chr18:21853917-21854795	chr18	+	21854274	21854538	True	NR_031724,NM_018030	chr18,chr18	+,-	MIR320C2,OSBPL1A	47111,-2078
chrX:107285866-107287473	chrX	+	107285902	107287503	True	NM_001170553,NM_002814,NM_182607	chrX,chrX,chrX	+,-,+	VSIG1,PSMD10,VSIG1	696,47424,696
chr1:48281342-48281873	chr1	+	48281520	48281864	True	NM_001194986,NM_004474	chr1,chr1	-,+	LOC388630,FOXD2	180748,-379882
chr6:35699969-35700803	chr6	+	35700143	35700656	True	NR_027117,NM_001145775,NM_145028	chr6,chr6,chr6	-,-,+	LOC285847,FKBP5,C6orf81	4125,-3783,4202
chr12:56524760-56525347	chr12	+	56524812	56525368	True	NM_015292,NM_001130420,NM_001184796	chr12,chr12,chr12	+,-,+	ESYT1,SMARCC2,ESYT1	-2877,58033,-2877
chr1:150122337-150122571	chr1	+	150122440	150122504	True	NM_016274,NM_001136479	chr1,chr1	+,-	PLEKHO1,ANP32E	-321,84572
chr12:49374588-49374842	chr12	+	49374637	49374729	True	NM_003394,NM_005430	chr12,chr12	-,+	WNT10B,WNT1	-8996,-2452
chrX:70948956-70950061	chrX	+	70949073	70949957	True	NR_034005,NR_001568	chrX,chrX	+,-	FLJ46446,BCYRN1	-32088,-111
chrX:70948956-70950061	chrX	-	70971273	70972153	False	NR_001568,NM_001145139	chrX,chrX	-,+	BCYRN1,CXorf49B	-22311,10986
chr22:24130354-24131195	chr22	+	24130451	24131026	True	NM_213720,NM_003073,NM_001007468	chr22,chr22,chr22	-,+,+	CHCHD10,SMARCB1,SMARCB1	-20310,-1367,-1367
chr20:18548295-18548538	chr20	+	18548299	18548590	True	NM_006606,NR_015432	chr20,chr20	-,+	RBBP9,LOC388789	-70412,-280
chr10:14921685-14922325	chr10	+	14921694	14922281	True	NM_001029954,NR_034181,NM_024670,NM_001193426,NM_001193427,NM_001193424,NM_001193425	chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,+,+,+,+,+,+	CDNF,SUV39H2,SUV39H2,SUV39H2,SUV39H2,SUV39H2,SUV39H2	-41711,-963,-846,-963,-880,-963,-880
chr12:125399825-125400172	chr12	+	125399981	125400189	True	NM_021009,NM_080626	chr12,chr12	-,+	UBC,BRI3BP	-394,78004
chr12:54447594-54447805	chr12	+	54447617	54447847	True	NM_153633,NR_026655,NR_026658	chr12,chr12,chr12	+,+,-	HOXC4,FLJ12825,LOC100240735	-7,4190,27810
chr1:153600130-153600595	chr1	+	153600291	153600547	True	NM_015607,NM_001024211,NM_001024212,NM_001024213,NM_006271,NM_001024210,NM_005979	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,-,+,-,-	CHTOP,S100A13,S100A13,S100A13,S100A1,S100A13,S100A13	5977,-174,-547,-767,325,6071,218
chr7:2559769-2560067	chr7	+	2559829	2560023	True	NM_002304,NM_001040167,NM_001040168,NM_001166355,NM_152743	chr7,chr7,chr7,chr7,chr7	+,+,+,+,-	LFNG,LFNG,LFNG,LFNG,BRAT1	-2383,-401,-401,-7717,35419
chr1:197741877-197743812	chr1	+	197742014	197743719	True	NM_001024594,NM_001195216,NM_001195215,NM_144977	chr1,chr1,chr1,chr1	+,-,-,-	C1orf53,DENND1B,DENND1B,DENND1B	127962,962,962,962
chr16:3356633-3357042	chr16	+	3356720	3356828	True	NM_153028,NM_033208	chr16,chr16	+,-	ZNF75A,TIGD7	-1353,-1281
chrX:54947232-54947810	chrX	+	54947291	54947785	True	NM_002625,NM_001039705,NM_177556,NM_016157	chrX,chrX,chrX,chrX	-,+,+,+	PFKFB1,TRO,TRO,TRO	72776,-93,-93,-93
chr19:42194980-42195473	chr19	+	42194998	42195338	True	NM_004363,NM_006890	chr19,chr19	+,-	CEACAM5,CEACAM7	17191,-2902
chr17:27945949-27947442	chr17	+	27946133	27947262	True	NM_032854,NM_152345	chr17,chr17	-,+	CORO6,ANKRD13B	1229,-25657
chrX:19138265-19139703	chrX	+	19138270	19139656	True	NM_001079858,NM_001079859,NM_001079860,NM_001184835,NM_001184834,NM_001184837,NM_001184836,NM_001184833,NM_000284,NM_005756	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,-,-,-,+,-	GPR64,GPR64,GPR64,GPR64,GPR64,GPR64,GPR64,GPR64,PDHA1,GPR64	1150,1150,1150,1150,1150,1150,1150,1150,222354,1150
chr8:23097498-23098406	chr8	+	23097525	23098256	True	NM_152272,NM_003844	chr8,chr8	+,-	CHMP7,TNFRSF10A	2893,-14845
chr17:33760636-33761044	chr17	+	33760710	33761055	True	NR_003037,NM_018042	chr17,chr17	+,-	SNORD7,SLFN12	139620,-1167
chr7:154718471-154719716	chr7	+	154718470	154719631	True	NM_007349,NR_024477,NR_024476	chr7,chr7,chr7	-,+,+	PAXIP1,LOC100132707,LOC100132707	75101,595,595
chr13:77606275-77607742	chr13	+	77606317	77607708	True	NM_006493,NM_012158	chr13,chr13	+,-	CLN5,FBXL3	-40309,-4986
chr6:32095461-32095690	chr6_mcf_hap5	+	3475295	3475567	False	NM_001136153,NM_138717,NM_004381,NM_022110	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	-,+,-,-	ATF6B,PPT2,ATF6B,FKBPL	328,25484,328,2378
chr6:32095461-32095690	chr6_dbb_hap3	+	3374639	3374911	False	NM_001136153,NM_138717,NM_004381,NM_022110	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	-,+,-,-	ATF6B,PPT2,ATF6B,FKBPL	328,25490,328,2378
chr6:32095461-32095690	chr6	+	32095467	32095739	True	NM_001136153,NM_138717,NM_004381,NM_022110	chr6,chr6,chr6,chr6	-,+,-,-	ATF6B,PPT2,ATF6B,FKBPL	328,25489,328,2378
chr6:32095461-32095690	chr6_cox_hap2	+	3566127	3566399	False	NM_001136153,NM_138717,NM_004381,NM_022110	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	-,+,-,-	ATF6B,PPT2,ATF6B,FKBPL	328,25497,328,2378
chr7:33102536-33103114	chr7	+	33102603	33103141	True	NM_001033604,NM_001002010,NR_029372	chr7,chr7,chr7	+,-,-	BBS9,NT5C3,NT5C3	66010,-194,-194
chr9:111617730-111618117	chr9	+	111617790	111618078	True	NM_006687,NM_006686	chr9,chr9	+,-	ACTL7A,ACTL7B	6524,247
chr17:79521059-79521659	chr17	+	79521162	79521709	True	NR_033338,NM_012418,NM_025161	chr17,chr17,chr17	-,+,-	C17orf70,FSCN2,C17orf70	-1733,-25796,-1733
chr1:75590463-75591012	chr1	+	75590471	75590945	True	NM_001001933,NM_001889	chr1,chr1	+,-	LHX8,CRYZ	3173,-391379
chr7:77433136-77433801	chr7	+	77433214	77433636	True	NM_032936,NM_001127360,NM_001127358	chr7,chr7,chr7	-,+,+	TMEM60,PHTF2,PHTF2	-5467,-5165,-5165
chr2:12855229-12856076	chr2	+	12855272	12856054	True	NR_027303,NM_021643,NR_036226	chr2,chr2,chr2	+,+,-	TRIB2,TRIB2,MIR4262	943,943,-878160
chr14:32597489-32597834	chr14	+	32597619	32597809	True	NR_027263,NM_001173	chr14,chr14	-,+	C14orf128,ARHGAP5	-51714,-51175
chr7:158381892-158383075	chr7	+	158381903	158383017	True	NM_130843,NM_130842,NM_018051,NM_002847	chr7,chr7,chr7,chr7	-,-,+,-	PTPRN2,PTPRN2,WDR60,PTPRN2	-1421,-1421,266251,-1421
chr1:161367649-161368178	chr1	+	161367924	161368116	True	NM_001013625,NM_003001	chr1,chr1	-,+	C1orf192,SDHC	-30260,-83817
chr13:23500151-23500376	chr13	+	23500204	23500424	True	NM_000231,NR_033774	chr13,chr13	+,-	SGCG,BASP1P1	254635,-27884
chr6:167370291-167370496	chr6	+	167370434	167370518	True	NM_003730,NM_007045	chr6,chr6	-,+	RNASET2,FGFR1OP	-357,42297
chr3:112277879-112279013	chr3	+	112278283	112279035	True	NM_017945,NM_022488	chr3,chr3	+,-	SLC35A5,ATG3	1859,1506
chr1:48463220-48463433	chr1	+	48463240	48463374	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	-678,224982
chrX:148793704-148793989	chrX	+	148793705	148794011	True	NM_032508,NM_005366	chrX,chrX	-,+	TMEM185A,MAGEA11	-80218,-18
chr19:15588314-15589012	chr19	+	15588613	15588806	True	NM_052890,NR_031716	chr19,chr19	-,+	PGLYRP2,MIR1470	1560,-28305
chr17:9695409-9696237	chr17	+	9695411	9695930	True	NM_001105571,NM_004246	chr17,chr17	-,+	DHRS7C,GLP2R	-810,33450
chr17:36244799-36245615	chr17	+	36245212	36245272	True	NM_032258,NR_024178	chr17,chr17	+,-	TBC1D3F,LOC284100	38687,-849
chr1:78707333-78707616	chr1	+	78707352	78707448	True	NR_027310,NM_003902	chr1,chr1	+,-	MGC27382,FUBP1	-12120,-262575
chr19:53361650-53362075	chr19	+	53361802	53361919	True	NM_199132,NM_152473,NM_001008801	chr19,chr19,chr19	-,+,-	ZNF468,HERV-V1,ZNF468	-900,155424,-900
chr3:155585261-155586842	chr3	+	155585729	155586735	True	NM_003875,NM_004733	chr3,chr3	+,-	GMPS,SLC33A1	1589,-13481
chrX:129040642-129041654	chrX	+	129040731	129041672	True	NM_001166221,NM_006649,NM_016032	chrX,chrX,chrX	+,+,-	UTP14A,UTP14A,ZDHHC9	-685,-685,-62821
chr18:9135989-9136219	chr18	+	9136030	9136102	True	NM_001204056,NM_001083625,NM_001042388,NM_015208	chr18,chr18,chr18,chr18	+,+,-,+	ANKRD12,ANKRD12,PPP4R1,ANKRD12	1458,648,478548,648
chr7:120628775-120629157	chr7	+	120628851	120629191	True	NM_024913,NM_001105533,NM_012338	chr7,chr7,chr7	+,+,-	C7orf58,C7orf58,TSPAN12	-151,253,-130674
chr1:212780515-212780965	chr1	+	212780717	212780862	True	NM_001674,NM_018664,NM_001040619	chr1,chr1,chr1	+,-,+	ATF3,BATF3,ATF3	1131,92516,1131
chr1:19578278-19578543	chr1	+	19578294	19578497	True	NM_016183,NM_015047	chr1,chr1	+,-	MRTO4,KIAA0090	-270,-248
chr9:126696827-126697347	chr9	+	126697072	126697358	True	NM_004789,NM_020946,NM_024820	chr9,chr9,chr9	+,-,-	LHX2,DENND1A,DENND1A	76530,-4655,-4655
chrX:138726208-138727795	chrX	+	138726842	138727815	True	NM_001171879,NM_001171878,NM_005369,NM_000133,NM_001171877	chrX,chrX,chrX,chrX,chrX	-,-,-,+,-	MCF2,MCF2,MCF2,F9,MCF2	-1842,-1842,-1842,-113998,-1842
chrX:153746117-153746623	chrX	+	153746131	153746614	True	NM_001171134,NM_021806,NM_001171132,NM_001171133,NM_001099856,NR_033237	chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,+,-	FAM3A,FAM3A,FAM3A,FAM3A,IKBKG,FAM3A	-1565,-1565,-1565,-1565,23844,-1565
chr9:86971668-86972012	chr9	+	86971794	86972059	True	NM_022127,NM_001018064	chr9,chr9	-,+	SLC28A3,NTRK2	11405,311406
chr21:45196636-45196962	chr21	+	45196652	45196840	True	NM_000100,NM_003683	chr21,chr21	-,+	CSTB,RRP1	-393,12577
chr20:30698746-30700218	chr20	+	30698880	30699939	True	NR_002781,NM_014742	chr20,chr20	-,+	TSPY26P,TM9SF4	78275,-1627
chr13:53192035-53192767	chr13	+	53192229	53192771	True	NM_001011724,NM_001011725,NM_001011705	chr13,chr13,chr13	+,+,-	HNRNPA1L2,HNRNPA1L2,LECT1	-675,-675,121226
chr10:115452156-115454057	chr10	+	115452397	115454092	True	NM_033339,NM_198060	chr10,chr10	+,-	CASP7,NRAP	-13022,-28592
chr2:207307730-207307962	chr2	+	207307750	207307914	True	NM_005279,NM_003812	chr2,chr2	-,+	GPR1,ADAM23	-224979,453
chr11:64410961-64411354	chr11	+	64411269	64411339	True	NM_153378,NM_138734	chr11,chr11	+,-	SLC22A12,NRXN2	-53038,-482
chr5:25906836-25908296	chr5	+	25907003	25908075	True	NR_037896,NM_020227	chr5,chr5	-,+	LOC340107,PRDM9	-1066311,-2399331
chr11:117670263-117670978	chr11	+	117670338	117670932	True	NM_020693,NM_001558	chr11,chr11	-,+	DSCAML1,IL10RA	-2362,186173
chr7:141535984-141536338	chr7	+	141535999	141536355	True	NM_018980,NM_001008270,NM_001171951	chr7,chr7,chr7	+,-,-	TAS2R5,PRSS37,PRSS37	-46044,4916,4916
chr22:45407143-45407461	chr22	+	45407424	45407510	True	NM_007172,NM_138415,NM_001135862	chr22,chr22,chr22	+,-,-	NUP50,PHF21B,PHF21B	152215,-1843,-1615
chr1:200592020-200592784	chr1	+	200592185	200592561	True	NM_014875,NM_203459	chr1,chr1	-,+	KIF14,CAMSAP1L1	-2323,116124
chr2:65219355-65220074	chr2	+	65219411	65220117	True	NR_036586,NM_003038,NM_001193493	chr2,chr2,chr2	-,+,+	LOC400958,SLC1A4,SLC1A4	-59830,-2972,-3888
chr22:29197029-29197474	chr22	+	29197080	29197200	True	NM_005080,NM_173510,NM_001079539	chr22,chr22,chr22	-,+,-	XBP1,CCDC117,XBP1	-520,-28475,-520
chr14:65381551-65383059	chr14	+	65381554	65383026	True	NM_001202559,NM_001202558,NM_002083,NM_001204063,NM_001204064,NM_145165	chr14,chr14,chr14,chr14,chr14,chr14	+,+,-,+,+,+	CHURC1-FNTB,CHURC1-FNTB,GPX2,CHURC1,CHURC1,CHURC1	-533,-533,26559,-533,-533,-533
chr16:75148617-75148924	chr16	+	75148698	75148874	True	NM_153486,NM_194436,NM_153688	chr16,chr16,chr16	-,-,+	LDHD,LDHD,ZFP1	1846,1846,33546
chr21:43919206-43920019	chr21	+	43919211	43919871	True	NM_080860,NM_018964	chr21,chr21	-,+	RSPH1,SLC37A1	-2810,-124
chr22:46371304-46371601	chr22	+	46371364	46371540	True	NM_058238,NR_027240	chr22,chr22	-,+	WNT7B,LOC730668	1518,30955
chr14:63464472-63465812	chr14	+	63464689	63465634	True	NM_139318,NM_020663	chr14,chr14	-,+	KCNH5,RHOJ	46378,205510
chr9:96719102-96719899	chr9	+	96719129	96719909	True	NM_177995,NM_021570	chr9,chr9	+,-	PTPDC1,BARX1	73166,-1521
chr15:83623821-83624214	chr15	+	83623820	83624264	True	NM_031452,NM_004839,NM_199330,NM_199331,NM_199332	chr15,chr15,chr15,chr15,chr15	+,-,-,-,-	FAM103A1,HOMER2,HOMER2,HOMER2,HOMER2	30730,-2347,-2347,-2347,-2347
chr3:94656020-94656457	chr3	+	94656071	94656392	True	NR_015400,NM_001195643	chr3,chr3	+,-	LOC255025,DHFRL1	714,-874004
chr22:18118023-18118566	chr22	+	18118165	18118315	True	NM_001696,NM_001039366,NM_001039367,NM_015367	chr22,chr22,chr22,chr22	-,-,-,+	ATP6V1E1,ATP6V1E1,ATP6V1E1,BCL2L13	-6577,-6577,-6577,3169
chr14:74257134-74257946	chr14	+	74257135	74257595	True	NM_001146154,NM_001043318	chr14,chr14	+,-	PTGR2,C14orf43	60938,-3239
chr3:37032787-37034471	chr3	+	37032825	37034411	True	NM_001167617,NM_014805,NM_000249,NM_001167618,NM_001167619	chr3,chr3,chr3,chr3,chr3	+,-,+,+,+	MLH1,EPM2AIP1,MLH1,MLH1,MLH1	856,434,429,856,856
chr19:1449765-1450009	chr19	+	1449791	1449915	True	NM_152482,NM_005883	chr19,chr19	-,+	C19orf25,APC2	29363,232
chr19:17515151-17516222	chr19	+	17515215	17516111	True	NM_004335,NM_138401	chr19,chr19	-,+	BST2,FAM125A	323,14800
chr2:240323852-240324663	chr2	+	240323882	240324602	True	NR_036229,NM_006037	chr2,chr2	+,-	MIR4269,HDAC4	-96776,-1239
chr11:19736110-19736490	chr11	+	19736258	19736510	True	NM_182964,NR_015384,NM_145117	chr11,chr11,chr11	+,-,+	NAV2,LOC100126784,NAV2	-1428,-112,-1428
chr3:24535645-24535864	chr3	+	24535729	24535879	True	NM_001145425,NM_000461,NM_001128176,NM_001128177	chr3,chr3,chr3,chr3	+,-,-,-	NR1D2,THRB,THRB,THRB	-548168,484,437,484
chrX:10126407-10126622	chrX	+	10126490	10126560	True	NM_001830,NM_000273	chrX,chrX	+,-	CLCN4,GPR143	-1556,-392485
chr9:17574140-17574708	chr9	+	17574139	17574584	True	NM_003026,NM_017637	chr9,chr9	+,-	SH3GL2,BNC2	4368,-703353
chr12:2999352-2999759	chr12	+	2999436	2999766	True	NM_202003,NM_001160408,NM_003324	chr12,chr12,chr12	-,+,+	FOXM1,TULP3,TULP3	-13133,266,266
chr4:73923065-73924797	chr4	+	73923216	73924667	True	NM_000477,NM_173827	chr4,chr4	+,-	ALB,COX18	345304,10859
chr19:49865159-49865439	chr19	+	49865369	49865487	True	NM_014419,NM_003598,NM_001197302,NM_001197301	chr19,chr19,chr19,chr19	+,-,+,+	DKKL1,TEAD2,DKKL1,DKKL1	1554,277,1499,1554
chr14:94392159-94392705	chr14	+	94392345	94392753	True	NM_138344,NR_027004	chr14,chr14	+,-	FAM181A,C14orf86	-7138,15
chr21:45598069-45598272	chr21	+	45598113	45598247	True	NM_198155,NM_015259	chr21,chr21	+,-	C21orf33,ICOSLG	-44670,62637
chr2:160569319-160569545	chr2	+	160569399	160569553	True	NM_001198763,NM_022826	chr2,chr2	-,+	CD302,MARCH7	85263,-440
chr1:152083816-152084930	chr1	+	152083859	152084969	True	NR_024237,NM_007113	chr1,chr1	+,-	LOC100132111,TCHH	-272965,1637
chr16:2771950-2772568	chr16	+	2772125	2772334	True	NM_016333,NM_031948	chr16,chr16	+,-	SRRM2,PRSS27	29995,-1573
chr17:66015599-66016048	chr17	+	66015816	66016012	True	NM_002266,NM_181656	chr17,chr17	+,-	KPNA2,C17orf58	15835,-26051
chr14:54907903-54908130	chr14	+	54907952	54908126	True	NM_005776,NM_005192	chr14,chr14	-,+	CNIH,CDKN3	72,-44330
chr20:899655-899890	chr20	+	899664	899746	True	NM_015985,NM_031424	chr20,chr20	-,+	ANGPT4,FAM110A	-2704,-74431
chr10:51550072-51550774	chr10	+	51550111	51550823	True	NM_001077685,NM_138634,NM_002443	chr10,chr10,chr10	-,+,+	AGAP7,MSMB,MSMB	-63784,-613,-613
chr2:47594779-47595677	chr2	+	47595363	47595542	True	NR_030286,NM_001743,NM_002354	chr2,chr2,chr2	+,-,+	MIR559,CALM2,EPCAM	9271,-191623,744
chr14:103017880-103018356	chr14	+	103018205	103018357	True	NM_152326,NR_036192	chr14,chr14	-,+	ANKRD9,MIR4309	-42077,-12275
chr2:209010817-209012772	chr2	+	209010873	209012625	True	NM_005210,NM_001178000	chr2,chr2	-,+	CRYGB,PIKFYVE	4,118365
chr17:19027886-19028449	chr17	+	19028436	19028498	True	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	2283,-78100
chr17:19027886-19028449	chr17	-	18952671	18952733	False	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	78048,-2335
chr10:102091382-102092622	chr10	+	102091748	102092255	True	NM_016112,NM_005063	chr10,chr10	-,+	PKD2L1,SCD	-1505,14516
chr1:66812719-66813127	chr1	+	66812736	66813159	True	NM_005478,NM_001037339	chr1,chr1	-,+	INSL5,PDE4B	453840,-14994
chr19:40813863-40814221	chr19	+	40813912	40814035	True	NM_001031696,NM_001626	chr19,chr19	+,-	PLD3,AKT2	40296,-22647
chrX:66808500-66808959	chrX	+	66808512	66808908	True	NM_001011645,NM_002547	chrX,chrX	+,-	AR,OPHN1	-19887,844441
chr18:13216196-13217087	chr18	+	13216286	13216970	True	NM_002828,NM_181482,NM_181481	chr18,chr18,chr18	-,+,+	PTPN2,C18orf1,C18orf1	-331952,1815,1815
chr7:102260039-102261168	chr7	+	102260480	102261166	True	NM_001079877,NM_001031618,NM_006989	chr7,chr7,chr7	-,+,-	RASA4,SPDYE2,RASA4	-3275,29605,-3275
chr7:102260039-102261168	chr7	+	102161391	102162077	False	NM_001031618,NM_006234	chr7,chr7	+,-	SPDYE2,POLR2J	29601,-42010
chr3:120312589-120313305	chr3	+	120312666	120312904	True	NM_004547,NM_001168331,NM_000187	chr3,chr3,chr3	+,+,-	NDUFB4,NDUFB4,HGD	2223,2223,88564
chr19:42361950-42362764	chr19	+	42361986	42362476	True	NM_001022,NM_173506	chr19,chr19	+,-	RPS19,LYPD4	1511,-13478
chr16:28517749-28518198	chr16	+	28517755	28518243	True	NM_018690,NM_145659	chr16,chr16	+,-	APOBR,IL27	-11813,-38
chr17:58467772-58468298	chr17	+	58467922	58468340	True	NM_181707,NM_032582	chr17,chr17	+,-	C17orf64,USP32	31524,1296
chr6:37398644-37399887	chr6	+	37399051	37399524	True	NM_015050,NM_138493	chr6,chr6	+,-	FTSJD2,C6orf129	1382,68233
chr21:33651823-33652112	chr21	+	33651930	33652106	True	NM_178817,NM_018944	chr21,chr21	+,-	MRAP,MIS18A	12017,-554
chr7:123259668-123260212	chr7	+	123259896	123260250	True	NM_080928,NM_005000	chr7,chr7	+,-	ASB15,NDUFA5	-10845,-61938
chr1:24524313-24524681	chr1	+	24524340	24524628	True	NM_173065,NR_027087	chr1,chr1	-,+	IL28RA,LOC284632	-10575,2101
chr17:20059931-20060309	chr17	+	20060047	20060289	True	NM_007202,NM_001033555,NM_001033554	chr17,chr17,chr17	-,+,+	AKAP10,SPECC1,SPECC1	-178918,-696,-696
chr11:118991063-118992027	chr11	+	118991064	118991971	True	NM_015517,NM_198971,NM_001382	chr11,chr11,chr11	+,+,-	HINFP,HINFP,DPAGT1	316,316,-18279
chr1:234509470-234509703	chr1	+	234509562	234509702	True	NM_001012985,NM_005646	chr1,chr1	+,-	C1orf31,TARBP1	-184,105197
chr2:86426807-86427159	chr2	+	86426839	86427017	True	NM_006839,NM_016622,NM_001100170,NM_145644,NM_001100169	chr2,chr2,chr2,chr2,chr2	-,+,-,+,-	IMMT,MRPL35,IMMT,MRPL35,IMMT	-3946,-334,-3946,-334,-3946
chr5:151279119-151279877	chr5	+	151279201	151279921	True	NM_198395,NM_000171	chr5,chr5	+,-	G3BP1,GLRA1	-127776,24526
chr9:37801488-37802908	chr9	+	37801874	37802878	True	NM_001002269,NM_024345	chr9,chr9	-,+	EXOSC3,DCAF10	-16807,-1136
chrX:51074200-51075023	chrX	+	51074236	51075065	True	NM_018159,NM_153183	chrX,chrX	-,+	NUDT11,NUDT10	164444,17
chr7:48962374-48964049	chr7	+	48962448	48963904	True	NR_003595,NM_152782	chr7,chr7	+,-	CDC14C,SUN3	252,-893732
chr7:48962374-48964049	chr7	-	48888870	48889406	False	NR_003595,NM_152782	chr7,chr7	+,-	CDC14C,SUN3	74750,-820154
chr17:38255762-38256206	chr17	+	38255767	38256223	True	NM_001012241,NM_021724	chr17,chr17	+,-	MSL1,NR1D1	22566,800
chr22:23921319-23922179	chr22	+	23921396	23922061	True	NM_153615,NM_152855,NM_020070	chr22,chr22,chr22	+,-,-	RGL4,IGLL1,IGLL1	110986,487,487
chr2:127866059-127866376	chr2	+	127866138	127866210	True	NM_000312,NM_139350,NM_004305,NM_139347,NM_139346,NM_139345,NM_139344,NM_139343,NM_139351,NM_139349,NM_139348	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-,-,-,-,-,-	PROC,BIN1,BIN1,BIN1,BIN1,BIN1,BIN1,BIN1,BIN1,BIN1,BIN1	309785,-1274,-1274,-1274,-1274,-1274,-1274,-1274,-1274,-1274,-1274
chr20:49412417-49412774	chr20	+	49412429	49412493	True	NM_198799,NM_015339,NM_017843,NM_001010974	chr20,chr20,chr20,chr20	+,-,+,+	BCAS4,ADNP,BCAS4,BCAS4	-1021,135084,-1021,-1021
chr10:31271484-31272389	chr10	+	31271483	31272196	True	NM_001143769,NM_001174093	chr10,chr10	-,+	ZNF438,ZEB1	16301,335904
chr2:42720244-42720446	chr2	+	42720245	42720487	True	NM_020744,NM_172344,NM_133329	chr2,chr2,chr2	+,-,-	MTA3,KCNG3,KCNG3	75183,800,800
chrX:148856247-148856489	chrX	+	148856316	148856426	True	NM_016153,NM_032508,NM_005365,NM_001164415,NM_001080790	chrX,chrX,chrX,chrX,chrX	+,-,+,+,+	HSFX1,TMEM185A,MAGEA9,HSFX2,MAGEA9B	-641,-142829,7173,-641,7166
chrX:148856247-148856489	chrX	-	148676273	148676383	False	NM_016153,NM_005365,NM_001164415,NM_001171909,NM_001080790	chrX,chrX,chrX,chrX,chrX	-,-,-,+,-	HSFX1,MAGEA9,HSFX2,CXorf40A,MAGEA9B	641,-7164,641,-50258,-7157
chr3:33482051-33482327	chr3	+	33482125	33482343	True	NM_001171713,NM_014517,NM_001128161,NM_001128160	chr3,chr3,chr3,chr3	+,-,-,-	FBXL2,UBP1,UBP1,UBP1	-163239,-255,-228,-255
chrX:22050117-22050662	chrX	+	22050189	22050697	True	NM_014332,NM_000444	chrX,chrX	-,+	SMPX,PHEX	-273959,223
chr17:683124-683837	chr17	+	683504	683793	True	NM_018146,NM_016080	chr17,chr17	+,-	RNMTL1,GLOD4	1719,1829
chr1:100814674-100815310	chr1	+	100814764	100815207	True	NM_033313,NM_033312,NM_001918,NM_003672	chr1,chr1,chr1,chr1	+,+,-,+	CDC14A,CDC14A,DBT,CDC14A	2815,2815,-99355,2815
chr16:4604038-4604744	chr16	+	4604042	4604342	True	NM_001145011,NM_013399	chr16,chr16	+,-	LOC342346,C16orf5	2148,-15226
chr5:162929157-162930236	chr5	+	162929445	162930256	True	NM_182796,NM_145266,NM_013283	chr5,chr5,chr5	+,-,+	MAT2B,NUDCD2,MAT2B	-26,-42302,2328
chr10:95750541-95750791	chr10	+	95750607	95750821	True	NR_002319,NM_016341	chr10,chr10	-,+	PIPSL,PLCE1	-28935,2924
chr16:56485682-56485893	chr16	+	56485710	56485882	True	NM_018233,NM_007006	chr16,chr16	+,-	OGFOD1,NUDT21	-337,-449
chr13:114054871-114055182	chr13	+	114054879	114055217	True	NM_024719,NM_017905	chr13,chr13	-,+	GRTP1,TMCO3	-36416,90090
chr20:32264810-32265211	chr20	+	32265082	32265254	True	NM_001024675,NM_031231,NM_031232,NM_005225	chr20,chr20,chr20,chr20	+,-,-,-	C20orf134,NECAB3,NECAB3,E2F1	-10829,-2818,-2818,9006
chr1:854527-854737	chr1	+	854612	854674	True	NM_152486,NR_026874	chr1,chr1	+,-	SAMD11,FLJ39609	6446,193
chr1:24881590-24881909	chr1	+	24881803	24881957	True	NM_001199012,NM_001010980	chr1,chr1	-,+	C1orf201,C1orf130	-140216,609
chr9:19409071-19409526	chr9	+	19409130	19409452	True	NM_001010,NM_001010887	chr9,chr9	-,+	RPS6,ACER2	-28895,-256
chr10:29582825-29584584	chr10	+	29583152	29584626	True	NR_030335,NM_032517	chr10,chr10	-,+	MIR604,LYZL1	249450,-5213
chr6:36854030-36854982	chr6	+	36854075	36854891	True	NM_152734,NM_016059	chr6,chr6	+,-	C6orf89,PPIL1	-486,-11275
chr17:8215925-8216288	chr17	+	8215985	8216170	True	NM_025014,NM_201520,NM_173728	chr17,chr17,chr17	+,-,+	ARHGEF15,SLC25A35,ARHGEF15	-1896,-17815,-2480
chr11:126047425-126048014	chr11	+	126047433	126047960	True	NM_001144827,NM_024556	chr11,chr11	-,+	RPUSD4,FAM118B	33684,33658
chr6:125257987-125259175	chr6	+	125258034	125259210	True	NR_026876,NM_152553	chr6,chr6	-,+	STL,RNF217	25013,45303
chr16:81251975-81253008	chr16	+	81251988	81252892	True	NM_017429,NM_052892,NM_001076780	chr16,chr16,chr16	+,-,-	BCMO1,PKD1L2,PKD1L2	19403,1142,1142
chr1:176176398-176176697	chr1	+	176176520	176176692	True	NM_021936,NM_001001740,NM_022457	chr1,chr1,chr1	+,-,-	PAPPA2,RFWD2,RFWD2	255614,-150,-150
chr17:36863971-36864195	chr17	+	36864077	36864239	True	NM_001130677,NM_005937	chr17,chr17	-,+	C17orf96,MLLT6	-32890,-2255
chr12:54887441-54888793	chr12	+	54887610	54888532	True	NM_005337,NM_144594,NM_001184976	chr12,chr12,chr12	+,-,+	NCKAP1L,GTSF1,NCKAP1L	2962,-20224,4035
chr7:44622070-44622448	chr7	+	44622123	44622445	True	NM_182547,NM_001003941,NM_019082	chr7,chr7,chr7	-,+,-	TMED4,OGDH,DDX56	-296,23675,-7986
chr20:37433643-37433894	chr20	+	37433695	37433801	True	NM_001172735,NR_027241,NM_015568	chr20,chr20,chr20	+,-,+	PPP1R16B,LOC388796,PPP1R16B	546,-369677,546
chr16:4352892-4353473	chr16	+	4353100	4353321	True	NM_032575,NM_003223	chr16,chr16	+,-	GLIS2,TFAP4	28903,-30099
chr6:14924967-14926685	chr6	+	14925238	14926626	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	319900,736713
chr1:28880632-28881073	chr1	+	28880737	28881082	True	NM_017846,NR_003109,NR_003077	chr1,chr1,chr1	+,+,-	TRNAU1AP,TRNAU1AP,SNORD99	-1259,-1259,24309
chr11:9338975-9339470	chr11	+	9339096	9339220	True	NM_006391,NM_001165030,NM_015012,NR_028491	chr11,chr11,chr11,chr11	+,-,-,-	IPO7,TMEM41B,TMEM41B,TMEM41B	66948,-2800,-2800,-2800
chr10:26936913-26938381	chr10	+	26936946	26938062	True	NR_026794,NM_001012750	chr10,chr10	+,-	LOC731789,ABI1	-4960,212004
chr12:52800647-52801850	chr12	+	52800693	52801521	True	NM_002284,NM_033033	chr12,chr12	+,-	KRT86,KRT82	-105095,-517
chr6:47446030-47446652	chr6	+	47446186	47446647	True	NM_014452,NM_012120	chr6,chr6	-,+	TNFRSF21,CD2AP	-168506,-712
chr1:40276163-40277421	chr1	+	40276351	40277268	True	NM_001720,NM_001195007	chr1,chr1	-,+	BMP8B,PPIE	-21818,-71888
chr9:15307588-15307809	chr9	+	15307587	15307749	True	NM_001168341,NM_001168340,NM_001039697,NM_001168339,NM_152574	chr9,chr9,chr9,chr9,chr9	-,-,+,-,-	TTC39B,TTC39B,SNAPC3,TTC39B,TTC39B	-229,-229,115032,-229,-229
chr11:74167299-74168512	chr11	+	74167509	74168461	True	NM_006591,NM_005472	chr11,chr11	+,-	POLD3,KCNE3	135167,10189
chr1:155117185-155117720	chr1	+	155117383	155117723	True	NM_018973,NM_153741,NM_018845,NM_001122839,NM_001122837	chr1,chr1,chr1,chr1,chr1	-,-,+,+,+	DPM3,DPM3,SLC50A1,SLC50A1,SLC50A1	-4500,-4387,-9146,-9146,-9146
chr6:36304425-36305153	chr6	+	36304472	36305192	True	NM_001010903,NM_001145717	chr6,chr6	-,+	C6orf222,PNPLA1	8,-66286
chr1:92682165-92683040	chr1	+	92682213	92683075	True	NM_053274,NM_001012425	chr1,chr1	-,+	GLMN,C1orf146	81545,497
chr2:166112606-166114139	chr2	+	166112882	166113825	True	NM_001040142,NM_006922	chr2,chr2	+,-	SCN2A,SCN3A	-17028,-52305
chr6:151648138-151649182	chr6	+	151648299	151649101	True	NM_144497,NM_020861	chr6,chr6	+,-	AKAP12,ZBTB2	-1684,63627
chr22:24318271-24318505	chr22	+	24318289	24318479	True	NM_001084393,NM_001355,NM_000854,NM_001084392	chr22,chr22,chr22,chr22	+,-,+,-	DDTL,DDT,GSTT2,DDT	-9314,3590,3834,-1609
chr22:24318271-24318505	chr22	-	24307227	24307417	False	NM_000854,NM_001080843,NM_001084393,NM_001084392	chr22,chr22,chr22,chr22	-,-,+,-	GSTT2,GSTT2B,DDTL,DDT	-3834,-3859,1608,9313
chr9:124329202-124329989	chr9	+	124329207	124329959	True	NR_003191,NM_032552	chr9,chr9	-,+	GGTA1,DAB2IP	-66901,7
chr9:131710443-131710793	chr9	+	131710498	131710820	True	NM_015354,NM_014908	chr9,chr9	+,-	NUP188,DOLK	-572,-486
chr5:133562843-133563911	chr5	+	133562886	133563698	True	NR_037434,NM_002715	chr5,chr5	+,-	MIR3661,PPP2CA	-1489,-936
chr12:50617037-50617536	chr12	+	50617315	50617549	True	NM_032901,NM_001113547	chr12,chr12	+,-	C12orf62,LIMA1	-111480,-827
chr11:17760343-17760580	chr11	+	17760485	17760629	True	NM_004976,NM_153676,NM_001112741	chr11,chr11,chr11	+,-,+	KCNC1,USH1C,KCNC1	-3041,-194522,-3041
chr4:7070894-7071762	chr4	+	7070950	7071596	True	NM_152293,NM_025196	chr4,chr4	+,-	TADA2B,GRPEL1	-25845,-1150
chr9:133972246-133972446	chr9	+	133972264	133972484	True	NM_001185095,NM_001185096,NM_031426,NM_001145106,NR_033701	chr9,chr9,chr9,chr9,chr9	+,+,+,-,+	AIF1L,AIF1L,AIF1L,FIBCD1,AIF1L	-452,-452,-452,-157809,-452
chr2:101440694-101442625	chr2	+	101440861	101442292	True	NM_001102426,NM_002518	chr2,chr2	-,+	TBC1D8,NPAS2	325604,-4306
chr7:87849328-87850029	chr7	+	87849521	87850068	True	NM_021723,NM_003130,NM_198901	chr7,chr7,chr7	+,-,-	ADAM22,SRI,SRI	-286006,-128,6290
chr1:116927460-116928468	chr1	+	116927459	116928278	True	NM_001160234,NR_024126	chr1,chr1	+,-	ATP1A1,ATP1A1OS	-1521,32953
chr7:36763781-36764138	chr7	+	36763902	36764174	True	NM_001637,NM_018685,NM_001177507,NM_001177506	chr7,chr7,chr7,chr7	-,+,-,-	AOAH,ANLN,AOAH,AOAH	30,-334533,30,30
chr11:72526842-72527318	chr11	+	72526911	72526981	True	NM_033388,NM_006645	chr11,chr11	+,-	ATG16L2,STARD10	-1511,-22161
chr11:64691487-64691954	chr11	+	64691551	64691903	True	NM_015104,NM_006244	chr11,chr11	-,+	ATG2A,PPP2R5B	-6829,239
chr19:55896900-55897106	chr19	+	55897042	55897152	True	NM_139172,NM_001190764,NM_000991,NM_001136135,NM_001136134,NM_001136137,NM_001136136	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+,+	TMEM190,LOC388564,RPL28,RPL28,RPL28,RPL28,RPL28	-8889,-1415,147,147,147,147,147
chr1:95008043-95009675	chr1	+	95008165	95009669	True	NM_001178096,NM_001993,NM_002858	chr1,chr1,chr1	-,-,+	F3,F3,ABCD3	-752,-752,-124283
chr7:139525521-139525941	chr7	+	139525600	139525922	True	NR_029394,NM_001061,NM_022740,NM_030984,NM_001166253	chr7,chr7,chr7,chr7,chr7	+,+,-,+,+	TBXAS1,TBXAS1,HIPK2,TBXAS1,TBXAS1	3029,3029,-47907,3029,3029
chr8:77594824-77595092	chr8	+	77594930	77595054	True	NR_024360,NM_024721	chr8,chr8	-,+	LOC100192378,ZFHX4	506,-1466
chr8:81786887-81787832	chr8	+	81786901	81787321	True	NM_001033723,NM_023929	chr8,chr8	-,+	ZNF704,ZBTB10	-51,-388510
chr15:22832539-22832781	chr15	+	22832746	22832806	True	NR_027407,NM_001102610,NM_052903	chr15,chr15,chr15	-,+,+	GOLGA8DP,TUBGCP5,TUBGCP5	-117018,588,588
chr16:48719902-48720107	chr16	+	48720066	48720123	True	NM_153029,NM_031490	chr16,chr16	-,+	N4BP1,LONP2	-75946,-441910
chr6:149890565-149892373	chr6	+	149890815	149892131	True	NM_139126,NM_138785	chr6,chr6	-,+	PPIL4,C6orf72	-23644,-3339
chr6:34360789-34361393	chr6	+	34360816	34361316	True	NM_006703,NM_020804	chr6,chr6	-,+	NUDT3,PACSIN1	-359,72536
chr17:78516483-78516799	chr17	+	78516536	78516755	True	NM_002522,NM_020761,NM_001163034	chr17,chr17,chr17	-,+,+	NPTX1,RPTOR,RPTOR	-66132,1869,1869
chr15:65135488-65135707	chr15	+	65135516	65135750	True	NM_001195059,NM_025049,NM_025201	chr15,chr15,chr15	+,-,+	PLEKHO2,PIF1,PLEKHO2	-1485,-17678,-1485
chr5:96036422-96037229	chr5	+	96036547	96037248	True	NM_173060,NM_016442	chr5,chr5	+,-	CAST,ERAP1	1244,106701
chr12:26348389-26348653	chr12	+	26348447	26348637	True	NM_001135823,NM_005086,NM_030762	chr12,chr12,chr12	+,+,-	SSPN,SSPN,BHLHE41	-229,-4,-70444
chrX:19909363-19909903	chrX	+	19909363	19909914	True	NM_031892,NM_001173456	chrX,chrX	-,+	SH3KBP1,PDHA1	-3619,-547407
chr11:61382394-61383691	chr11	+	61382409	61383740	True	NM_004200,NR_002775	chr11,chr11	-,+	SYT7,RPLP0P2	-34111,47
chr6:99394932-99395327	chr6	+	99394959	99395273	True	NM_005604,NM_012160	chr6,chr6	+,-	POU3F2,FBXL4	-112430,626
chr12:123319768-123319979	chr12	+	123319964	123320028	True	NM_003959,NM_024667	chr12,chr12	+,-	HIP1R,VPS37B	10,60734
chr13:111973856-111974193	chr13	+	111973855	111973915	True	NM_152324,NM_017664	chr13,chr13	+,-	C13orf16,ANKRD10	-891,-406439
chrX:150560899-150562538	chrX	+	150561026	150562387	True	NM_001017980,NM_134446	chrX,chrX	+,-	VMA21,CD99L2	3269,-493737
chr6:112194715-112195520	chr6	+	112194903	112195564	True	NM_002037,NM_003880	chr6,chr6	-,+	FYN,WISP3	-276,179713
chr19:42785926-42786150	chr19	+	42785934	42786122	True	NM_015125,NM_002573	chr19,chr19	+,-	CIC,PAFAH1B3	2694,20724
chr8:24771643-24771854	chr8	+	24771645	24771875	True	NM_005382,NM_006158,NM_001105541	chr8,chr8,chr8	+,-,+	NEFM,NEFL,NEFM	-422,42306,579
chr10:104950610-104951061	chr10	+	104950613	104950882	True	NM_012229,NM_001134373,NM_001143909	chr10,chr10,chr10	-,-,+	NT5C2,NT5C2,LOC729020	2224,2224,54761
chr15:82800086-82801660	chr15	+	82801058	82801128	True	NR_026811,NR_033936,NR_033579	chr15,chr15,chr15	-,-,+	LOC80154,LOC727849,LOC440297	-2735,-2706,-47662
chr15:82800086-82801660	chr15	+	83185634	83185704	False	NR_026811,NR_033936,NR_033579	chr15,chr15,chr15	-,-,+	LOC80154,LOC727849,LOC440297	-2733,-2704,-55652
chr14:77273079-77274787	chr14	+	77273116	77274824	True	NM_015305,NM_194287	chr14,chr14	-,+	ANGEL1,C14orf166B	4509,17900
chr8:20038093-20038415	chr8	+	20038137	20038405	True	NM_003053,NM_001135691,NM_001693,NM_001142325,NM_001142324	chr8,chr8,chr8,chr8,chr8	-,-,+,-,-	SLC18A1,SLC18A1,ATP6V1B2,SLC18A1,SLC18A1	2362,2362,16298,2362,2362
chr1:112534153-112534969	chr1	+	112534153	112534818	True	NM_172198,NM_007204,NM_004980	chr1,chr1,chr1	-,+,-	KCND3,DDX20,KCND3	-2376,-236015,-2376
chr13:110439560-110439848	chr13	+	110439737	110439805	True	NM_003749,NM_001846	chr13,chr13	-,+	IRS2,COL4A2	-823,519825
chr3:184040488-184040962	chr3	+	184040492	184040924	True	NM_004953,NM_198244,NM_198242,NM_198241,NM_001194946,NM_001194947,NM_001171087,NR_003055,NM_182917	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,+,+,-,+,+	EIF4G1,EIF4G1,EIF4G1,EIF4G1,EIF4G1,EIF4G1,CLCN2,SNORD66,EIF4G1	-2452,-8270,-8270,-8270,-8270,-8270,38517,2559,-7601
chr8:127568947-127569193	chr8	+	127568984	127569230	True	NM_001159542,NM_174911	chr8,chr8	+,-	POU5F1B,FAM84B	858626,1531
chr3:124774074-124774292	chr3	+	124774079	124774282	True	NM_020733,NR_033437	chr3,chr3	-,+	HEG1,UMPS	570,-324917
chr12:51739878-51741212	chr12	+	51740361	51741201	True	NM_001971,NM_004858	chr12,chr12	-,+	CELA1,SLC4A8	16,77392
chr20:37066193-37066924	chr20	+	37066445	37066929	True	NR_002972,NR_015366,NR_027241,NR_003239,NR_003017,NR_003018	chr20,chr20,chr20,chr20,chr20,chr20	+,-,-,+,-,-	SNORA39,LOC388796,LOC388796,SNHG11,SNORA71C,SNORA71D	9796,-2483,-2427,8367,-7998,-3803
chr9:35692241-35693605	chr9	+	35692289	35692798	True	NM_001216,NM_003289,NM_213674	chr9,chr9,chr9	+,-,-	CA9,TPM2,TPM2	-18425,-2236,-2236
chrX:69644847-69645369	chrX	+	69645251	69645323	True	NM_001171192,NM_001171193,NM_017711,NM_001171191,NM_016484	chrX,chrX,chrX,chrX,chrX	+,+,+,+,-	GDPD2,GDPD2,GDPD2,GDPD2,PDZD11	-2421,-2421,-2421,-2421,-135453
chr2:23629403-23630872	chr2	+	23629502	23630758	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	519238,-21255
chr8:37307070-37307908	chr8	+	37307110	37307924	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	245376,297690
chr12:7031928-7033317	chr12	+	7031931	7033279	True	NM_001940,NM_001007026,NR_003010,NM_001975	chr12,chr12,chr12,chr12	+,+,-,+	ATN1,ATN1,SCARNA12,ENO2	4200,346,43540,-8368
chr2:220084374-220084674	chr2	+	220084461	220084625	True	NM_024085,NM_001077198,NM_018089,NM_001042410,NM_005689	chr2,chr2,chr2,chr2,chr2	-,-,+,+,-	ATG9A,ATG9A,ANKZF1,ANKZF1,ABCB6	9786,9786,9853,9984,-749
chr21:33454633-33456557	chr21	+	33454783	33456275	True	NR_024352,NR_038033	chr21,chr21	+,-	NCRNA00159,NCRNA00159	-2212,2383
chr4:69240039-69240588	chr4_ctg9_hap1	+	70149	70362	False	NM_014058,NM_133370	chr4_ctg9_hap1,chr4_ctg9_hap1	+,-	TMPRSS11E,YTHDC1	72726,-24403
chr4:69240039-69240588	chr4	+	69240227	69240440	True	NM_014058,NM_133370	chr4,chr4	+,-	TMPRSS11E,YTHDC1	72726,-24403
chr14:65016898-65017190	chr14	+	65016961	65017169	True	NM_006977,NM_021979,NM_172365	chr14,chr14,chr14	-,+,+	ZBTB25,HSPA2,C14orf50	-46407,-9834,-400
chr1:165395102-165396837	chr1	+	165395167	165396614	True	NM_006917,NM_001005214	chr1,chr1	-,+	RXRG,LRRC52	18029,116863
chr3:148803508-148803958	chr3	+	148803525	148803997	True	NM_032383,NM_139048,NM_003071	chr3,chr3,chr3	+,-,-	HPS3,HLTF,HLTF	43373,394,394
chr21:40986869-40987374	chr21	+	40986895	40987361	True	NR_026543,NR_026542,NM_006057	chr21,chr21,chr21	-,-,+	C21orf88,C21orf88,B3GALT5	-2146,-2146,41892
chr1:33839399-33840658	chr1	+	33839516	33840686	True	NM_145238,NM_198040	chr1,chr1	+,-	ZSCAN20,PHC2	97545,558
chr15:32334540-32336150	chr15	+	32334542	32336208	True	NM_001190455,NM_130901	chr15,chr15	+,-	CHRNA7,OTUD7A	-11908,-387000
chr14:20084372-20085680	chr14	+	20084472	20085555	True	NM_001145442,NM_172194	chr14,chr14	-,+	POTEM,OR4Q3	-64200,130031
chr20:37107552-37108783	chr20	+	37107709	37108627	True	NM_020336,NR_027241	chr20,chr20	+,-	RALGAPB,LOC388796	-6287,-43691
chr10:49891299-49891542	chr10	+	49891458	49891536	True	NM_020945,NM_021226	chr10,chr10	+,-	WDFY4,ARHGAP22	1981,-78320
chrX:72224133-72224917	chrX	+	72224301	72224951	True	NR_026595,NM_001042506	chrX,chrX	-,+	NCRNA00246,PABPC1L2B	-60712,-1004
chrX:72224133-72224917	chrX	-	72297755	72298405	False	NM_001042506,NM_001012977	chrX,chrX	+,-	PABPC1L2B,PABPC1L2A	-74454,1000
chr17:40429033-40429246	chr17	+	40429064	40429284	True	NM_012448,NM_003152	chr17,chr17	-,+	STAT5B,STAT5A	-640,10280
chr3:10364383-10365872	chr3	+	10364630	10365730	True	NR_024273,NR_024272,NM_183352,NM_001136232,NR_024146	chr3,chr3,chr3,chr3,chr3	-,-,-,-,+	SEC13,SEC13,SEC13,SEC13,GHRLOS	-1772,-1772,-1775,-1905,-37243
chr12:64848320-64848547	chr12	+	64848320	64848457	True	NM_001170633,NM_013254	chr12,chr12	-,+	C12orf56,TBK1	-63975,-2539
chr4:5990263-5990523	chr4	+	5990353	5990575	True	NR_037863,NM_001014809	chr4,chr4	+,-	LOC285484,CRMP1	211884,-95568
chr19:12847985-12848335	chr19	+	12847986	12848320	True	NM_024038,NM_004317	chr19,chr19	-,+	C19orf43,ASNA1	-2457,-15
chr11:28135015-28136156	chr11	+	28135231	28135867	True	NM_031217,NM_152636,NM_001113528	chr11,chr11,chr11	-,+,+	KIF18A,METTL15,METTL15	-5485,-5495,-5495
chr9:103187189-103187834	chr9	+	103187300	103187558	True	NM_001198806,NM_001198805,NM_017746,NM_001198807,NM_080655	chr9,chr9,chr9,chr9,chr9	+,+,-,+,+	C9orf30,C9orf30,TEX10,C9orf30,C9orf30	4237,2152,-72041,1936,1936
chr19:43258643-43259283	chr19	+	43258651	43259222	True	NR_036584,NM_001130167	chr19,chr19	+,-	LOC100289650,PSG8	66792,10662
chr19:43258643-43259283	chr19	+	43372419	43372469	False	NR_036584,NM_001184825	chr19,chr19	+,-	LOC100289650,PSG1	-46455,11452
chr11:65383965-65384319	chr11	+	65384079	65384243	True	NM_032223,NM_002419	chr11,chr11	+,-	PCNXL3,MAP3K11	-347,-2359
chr5:138859985-138860920	chr5	+	138860206	138860844	True	NM_198282,NM_003339	chr5,chr5	-,+	TMEM173,UBE2D2	1549,79906
chr7:100492374-100492578	chr7	+	100492424	100492598	True	NM_000665,NM_015908,NM_015831,NM_001015072	chr7,chr7,chr7,chr7	-,+,-,-	ACHE,SRRT,ACHE,UFSP1	993,-19774,993,-5085
chr2:203239338-203239595	chr2	+	203239470	203239599	True	NM_003352,NM_001204	chr2,chr2	-,+	SUMO1,BMPR2	-136148,1450
chr11:67811860-67812109	chr11	+	67811998	67812070	True	NM_030930,NM_006019,NM_006053	chr11,chr11,chr11	-,+,+	UNC93B1,TCIRG1,TCIRG1	-40405,-5587,-1602
chr16:75033825-75034033	chr16	+	75033835	75034007	True	NM_030581,NM_032268	chr16,chr16	-,+	WDR59,ZNRF1	-14818,-971
chr7:55636900-55637717	chr7	+	55637021	55637677	True	NM_018697,NM_030796	chr7,chr7	+,-	LANCL2,VOPP1	-203931,2575
chr9:65613788-65615251	chr9	+	65613792	65615084	True	NR_024496,NM_015667	chr9,chr9	+,-	LOC442421,FAM75A7	879184,-104182
chr9:65613788-65615251	chr9	+	43872193	43872631	False	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	-241463,-187360
chr9:65613788-65615251	chr9	+	40289230	40289880	False	NR_026803,NM_033160	chr9,chr9	+,-	FAM74A1,ZNF658	-389082,502282
chr9:65613788-65615251	chr9	-	39121400	39122071	False	NM_033655,NM_001085452	chr9,chr9	-,+	CNTNAP3,FAM75A1	166280,233627
chr17:43665525-43667525	chr17_ctg5_hap1	-	1200949	1202464	False	NR_026901,NR_037772	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LOC644172,CRHR1	-12561,-30496
chr17:43665525-43667525	chr17_ctg5_hap1	-	1420500	1422020	False	NR_002940,NM_016632	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LRRC37A4,ARL17A	59356,91914
chr17:43665525-43667525	chr17	+	43665716	43667225	True	NR_026901,NR_037772	chr17,chr17	-,+	LOC644172,CRHR1	12573,30484
chr17:79988910-79989119	chr17	+	79988939	79989097	True	NM_016286,NM_005052,NM_001195218,NM_144998,NM_144999	chr17,chr17,chr17,chr17,chr17	-,+,-,-,+	DCXR,RAC3,DCXR,STRA13,LRRC45	6526,434,6526,-8166,-7710
chr7:156689889-156690100	chr7	+	156689929	156690082	True	NM_022458,NM_138400	chr7,chr7	-,+	LMBR1,NOM1	-4027,52334
chr2:118771787-118772049	chr2	+	118771807	118772097	True	NM_019044,NM_016133	chr2,chr2	-,+	CCDC93,INSIG2	-68,73952
chr4:39188962-39190461	chr4	+	39189146	39190382	True	NM_025132,NM_024943	chr4,chr4	+,-	WDR19,TMEM156	-5174,-155105
chr14:50582695-50582948	chr14	+	50582766	50582930	True	NM_024558,NM_001040662,NM_015684	chr14,chr14,chr14	-,-,+	METTL21D,METTL21D,ATP5S	417,417,196116
chr6:31782140-31782542	chr6_qbl_hap6	+	3075968	3076232	False	NM_005345,NM_005527,NM_021177	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	+,-,-	HSPA1A,HSPA1L,LSM2	705,300,-7588
chr6:31782140-31782542	chr6_dbb_hap3	+	3067908	3068172	False	NM_005345,NM_005527,NM_021177	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	+,-,-	HSPA1A,HSPA1L,LSM2	705,300,-7582
chr6:31782140-31782542	chr6	+	31782321	31782585	True	NM_005345,NM_005527,NM_021177	chr6,chr6,chr6	+,-,-	HSPA1A,HSPA1L,LSM2	705,300,-7578
chr6:31782140-31782542	chr6_apd_hap1	+	3097082	3097346	False	NM_005345,NM_005527,NM_021177	chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1	+,-,-	HSPA1A,HSPA1L,LSM2	705,300,-7588
chr6:31782140-31782542	chr6_cox_hap2	+	3291901	3292165	False	NM_005345,NM_005527,NM_021177	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,-,-	HSPA1A,HSPA1L,LSM2	705,300,-7587
chr22:38035107-38035439	chr22	+	38035294	38035364	True	NM_006498,NM_018957	chr22,chr22	-,+	LGALS2,SH3BP1	-59270,319
chr1:150552326-150554117	chr1	+	150552553	150553916	True	NM_182763,NM_021960,NM_001197320,NR_036211	chr1,chr1,chr1,chr1	-,-,-,+	MCL1,MCL1,MCL1,MIR4257	-339,-339,-339,-28201
chr11:60679303-60680379	chr11	+	60679353	60680312	True	NM_014502,NM_024092	chr11,chr11	-,+	PRPF19,TMEM109	-5292,1058
chr14:21131933-21132488	chr14	+	21131958	21132094	True	NM_001145,NM_001001968	chr14,chr14	+,-	ANG,OR6S1	20241,-22108
chr16:18800786-18801197	chr16	+	18800785	18801191	True	NM_001030009,NM_001019,NM_024847	chr16,chr16,chr16	-,-,+	RPS15A,RPS15A,TMC7	515,515,194064
chr17:63817828-63818451	chr17	+	63818232	63818495	True	NM_002737,NM_001037325	chr17,chr17	+,-	PRKCA,CCDC46	480430,4221
chr15:97298958-97300048	chr15	+	97299242	97299953	True	NM_173499,NR_024172	chr15,chr15	+,-	SPATA8,LOC91948	26725,1117763
chr8:19169579-19170998	chr8	+	19169585	19170749	True	NM_001174160,NM_001174159,NM_001130518,NM_022071	chr8,chr8,chr8,chr8	+,+,-,+	SH2D4A,SH2D4A,CSGALNACT1,SH2D4A	331,737,289357,331
chr9:95520080-95520340	chr9	+	95520109	95520188	True	NR_026868,NM_015250,NM_001003800	chr9,chr9,chr9	+,-,-	ANKRD19,BICD2,BICD2	51704,6952,6952
chr3:128596903-128597223	chr3	+	128596915	128597098	True	NR_034179,NM_014049,NR_033426	chr3,chr3,chr3	-,+,+	LOC653712,ACAD9,ACAD9	-6531,1234,1234
chr19:10218425-10218674	chr19	+	10218447	10218703	True	NM_002566,NM_031917,NM_001198690,NR_003688,NR_004381,NM_001040664,NM_020230	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+,+	P2RY11,ANGPTL6,PPAN-P2RY11,SNORD105B,SNORD105,PPAN-P2RY11,PPAN	3493,-5022,-1599,1721,-171,-1599,-1599
chr19:55140447-55141805	chr19	+	55140622	55141668	True	NM_001081639,NM_001081638,NM_001081637,NM_145057	chr19,chr19,chr19,chr19	+,+,+,-	LILRB1,LILRB1,LILRB1,CDC42EP5	239,239,299,-156200
chr10:112255767-112256222	chr10	+	112255796	112256212	True	NM_005871,NM_004419	chr10,chr10	-,+	SMNDC1,DUSP5	-191089,1412
chr20:45522985-45523185	chr20	+	45522995	45523149	True	NM_005244,NM_172110,NM_033550	chr20,chr20,chr20	+,+,-	EYA2,EYA2,TP53RK	113,113,-204719
chr4:185744329-185746007	chr4	+	185744438	185745938	True	NM_152683,NM_001995	chr4,chr4	+,-	CCDC111,ACSL1	-173722,1327
chr19:49469935-49470861	chr19	+	49469954	49470857	True	NM_000146,NM_001161587	chr19,chr19	+,-	FTL,GYS1	-1439,25804
chr3:25471101-25471583	chr3	+	25471165	25471617	True	NM_016152,NM_000965,NM_001068	chr3,chr3,chr3	+,+,-	RARB,RARB,TOP2B	-1463,-1383,234227
chr12:53014533-53015647	chr12	+	53014584	53015554	True	NM_002284,NM_175068	chr12,chr12	+,-	KRT86,KRT73	-318998,-2241
chr4:15402672-15402961	chr4	+	15402695	15402953	True	NM_001193534,NM_001135171,NM_031911	chr4,chr4,chr4	-,+,+	FBXL5,C1QTNF7,C1QTNF7	254132,-26578,26675
chr1:53394178-53395453	chr1	+	53394477	53394833	True	NM_002979,NM_001198962,NM_001193599,NM_001193600,NM_001193617,NM_018281,NM_001198961,NM_001007098	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,-,+,+,+,-,-,+	SCP2,ECHDC2,SCP2,SCP2,SCP2,ECHDC2,ECHDC2,SCP2	-1627,-7031,-1627,-1627,-1627,-7031,-7031,-1627
chr8:109796691-109796952	chr8	+	109796715	109796983	True	NM_153015,NM_003301	chr8,chr8	-,+	TMEM74,TRHR	2837,302692
chr22:50528832-50529058	chr22	+	50528862	50529096	True	NM_139202,NM_018995,NM_015166,NM_001164105,NM_001164104	chr22,chr22,chr22,chr22,chr22	-,+,-,+,+	MLC1,MOV10L1,MLC1,MOV10L1,MOV10L1	-5081,-478,-4504,-228,-478
chr18:29543751-29544571	chr18	+	29543991	29544334	True	NM_014939,NM_017831	chr18,chr18	-,+	TRAPPC8,RNF125	-20900,54110
chrX:99195113-99196551	chrX	+	99195148	99196413	True	NM_022144,NR_024608	chrX,chrX	+,-	TNMD,LOC442459	643376,-307
chr12:69138907-69140016	chr12	+	69139224	69139726	True	NM_018656,NR_033335	chr12,chr12	+,-	SLC35E3,SNORA70G	209,-118069
chr10:52494001-52494918	chr10	+	52494049	52494965	True	NM_147156,NM_001079516	chr10,chr10	-,+	SGMS1,ASAH2B	-110312,4742
chr10:52494001-52494918	chr10	+	81660100	81660158	False	NR_033857,NM_003019	chr10,chr10	+,-	LOC100288974,SFTPD	4495,48761
chr2:37379131-37379620	chr2	+	37379319	37379434	True	NM_001135651,NR_037879,NM_001135652,NM_002759	chr2,chr2,chr2,chr2	-,+,-,-	EIF2AK2,LOC100505876,EIF2AK2,EIF2AK2	4811,44200,-4354,4811
chr14:105451505-105451721	chr14	+	105451519	105451603	True	NM_174891,NM_138420	chr14,chr14	+,-	C14orf79,AHNAK2	1012,-6825
chr14:94494040-94494316	chr14	+	94494049	94494247	True	NM_023112,NM_001202429	chr14,chr14	+,-	OTUB2,ASB2	-1376,-50973
chr12:12963020-12963265	chr12	+	12963067	12963167	True	NM_016355,NM_201224,NM_006143	chr12,chr12,chr12	+,+,-	DDX47,DDX47,GPR19	3112,3112,-113946
chr13:31313240-31314304	chr13	+	31313305	31314349	True	NM_001629,NM_002128	chr13,chr13	+,-	ALOX5AP,HMGB1	-3711,-273224
chr10:93347661-93347940	chr10	+	93347794	93347978	True	NR_024467,NM_182765	chr10,chr10	-,+	LOC100188947,HECTD2	23289,-177754
chr14:50584538-50586412	chr14	+	50584846	50586122	True	NM_024558,NM_001040662,NM_015684	chr14,chr14,chr14	-,-,+	METTL21D,METTL21D,ATP5S	-1549,-1549,192924
chr19:9246702-9247052	chr19	+	9246735	9246940	True	NM_001190791,NM_020933,NM_001001958	chr19,chr19,chr19	+,+,-	ZNF317,ZNF317,OR7G3	4115,4115,-9109
chr4:96470024-96470366	chr4	+	96470080	96470242	True	NM_005390,NM_003728	chr4,chr4	+,-	PDHA2,UNC5C	290996,169
chr7:98970584-98971153	chr7	+	98970596	98970986	True	NM_005720,NM_014891	chr7,chr7	+,-	ARPC1B,PDAP1	1311,35369
chr5:89770466-89770752	chr5	+	89770520	89770777	True	NM_006467,NM_203406	chr5,chr5	+,-	POLR3G,MBLAC2	-33,65
chr18:31803015-31803239	chr18	+	31803029	31803287	True	NM_001198548,NM_001392,NM_001198546,NM_001198547,NM_003787,NR_036752	chr18,chr18,chr18,chr18,chr18,chr18	-,+,-,-,-,-	NOL4,DTNA,NOL4,NOL4,NOL4,NOL4	278,269966,278,-595,278,-595
chr11:48328463-48329555	chr11	+	48328600	48329596	True	NM_001004725,NM_001005513	chr11,chr11	+,-	OR4S1,OR4C45	-883,44459
chr14:51970774-51971336	chr14	+	51970932	51971376	True	NM_001042481,NR_037676	chr14,chr14	+,-	FRMD6,C14orf82	-15128,147136
chr2:88990248-88991000	chr2	+	88990253	88991005	True	NM_144563,NM_004836	chr2,chr2	+,-	RPIA,EIF2AK3	170,-63159
chr19:48959094-48960458	chr19	+	48959154	48960415	True	NM_013348,NM_001080434,NM_170720	chr19,chr19,chr19	+,-,+	KCNJ14,LMTK3,KCNJ14	-439,56081,4090
chr13:36924547-36925101	chr13	+	36924551	36925095	True	NM_015087,NM_001111046,NM_001142296,NM_001142295	chr13,chr13,chr13,chr13	-,+,-,-	SPG20,CCNA1,SPG20,SPG20	-3905,80871,-3905,-3617
chr11:10578975-10580175	chr11	+	10579092	10580214	True	NM_006691,NR_034093	chr11,chr11	-,+	LYVE1,LOC100129827	10201,-16313
chr19:36978656-36979144	chr19	+	36978878	36979025	True	NM_001145344,NM_001145345,NM_001145343,NR_036504,NM_032838	chr19,chr19,chr19,chr19,chr19	-,-,-,+,-	ZNF566,ZNF566,ZNF566,LOC728752,ZNF566	1489,1489,1489,1503,1363
chr7:36764138-36766026	chr7	+	36764245	36766065	True	NM_001637,NM_018685,NM_001177507,NM_001177506	chr7,chr7,chr7,chr7	-,+,-,-	AOAH,ANLN,AOAH,AOAH	-91,-334875,-91,-91
chr9:140137512-140137836	chr9	+	140137641	140137803	True	NM_001004353,NM_006088,NM_001001710	chr9,chr9,chr9	+,+,-	C9orf173,TUBB2C,FAM166A	7926,-1990,4469
chr2:160143401-160143632	chr2	+	160143441	160143661	True	NM_001128213,NM_001128212,NM_033394,NM_152528	chr2,chr2,chr2,chr2	-,-,+,-	WDSUB1,WDSUB1,TANC1,WDSUB1	-338,-205,-318346,-378
chr16:31225355-31225570	chr16	+	31225481	31225617	True	NM_001008274,NM_152901	chr16,chr16	+,-	TRIM72,PYDC1	-190,2828
chr9:99673961-99674198	chr9	+	99674089	99674217	True	NR_028350,NM_001001662	chr9,chr9	+,-	LOC441454,ZNF782	-2783,-57700
chr9:99673961-99674198	chr9	-	97108068	97108118	False	NM_017561,NR_033937	chr9,chr9	-,+	FAM22F,LOC100132077	-17142,-13361
chr19:44258124-44258465	chr19	+	44258146	44258431	True	NM_019108,NM_019612	chr19,chr19	-,+	C19orf61,IRGC	764,-37984
chr22:32344127-32344924	chr22	+	32344214	32344954	True	NM_015372,NM_003405	chr22,chr22	-,+	C22orf24,YWHAH	-2878,-3786
chr22:45098785-45099091	chr22	+	45098807	45099131	True	NM_181333,NM_181334,NM_032287	chr22,chr22,chr22	+,+,-	PRR5,PRR5-ARHGAP8,LDOC1L	-780,-476,-204802
chr17:73764239-73765030	chr17	+	73764627	73764727	True	NM_000154,NM_001080419	chr17,chr17	-,+	GALK1,UNK	-3347,15953
chrY:22922784-22923014	chrY	+	22922794	22923019	True	NM_001039567,NR_001542	chrY,chrY	+,-	RPS4Y2,TTTY10	-4891,-241680
chr11:134202564-134202852	chr11	+	134202569	134202889	True	NM_138342,NM_018644	chr11,chr11	+,-	GLB1L2,B3GAT1	-852,78973
chr11:33257832-33258222	chr11	+	33258026	33258248	True	NM_001033506,NM_001048200	chr11,chr11	-,+	CSTF3,HIPK3	-74989,20919
chr5:37365283-37366292	chr5	+	37366186	37366340	True	NM_153485,NM_018034,NM_004298	chr5,chr5,chr5	-,+,-	NUP155,WDR70,NUP155	4907,13071,4597
chr1:155528116-155528775	chr1	+	155528275	155528441	True	NR_027023,NM_018489	chr1,chr1	+,-	LOC645676,ASH1L	3330,3933
chr10:103826526-103827007	chr10	+	103826581	103826769	True	NM_024747,NM_024541	chr10,chr10	+,-	HPS6,C10orf76	-1508,-10649
chr14:95939986-95941378	chr14	+	95940207	95941407	True	NM_016417,NM_152592	chr14,chr14	+,-	GLRX5,C14orf49	59915,816
chr7:74989102-74989468	chr7	+	74989285	74989360	True	NR_003614,NM_001002840,NM_018991	chr7,chr7,chr7	-,+,+	PMS2L2,STAG3L1,STAG3L1	-1070,-901,-901
chr7:74989102-74989468	chr7	-	72475533	72475608	False	NM_001013739,NR_003614	chr7,chr7	-,+	STAG3L3,PMS2L2	909,1071
chr7:74989102-74989468	chr7	-	74305826	74305901	False	NR_027777,NR_027776,NM_001025202,NR_027775	chr7,chr7,chr7,chr7	+,+,-,+	PMS2P5,PMS2P5,STAG3L2,PMS2P5	992,992,892,992
chr14:55518517-55518830	chr14	+	55518599	55518809	True	NM_007086,NM_144578	chr14,chr14	-,+	WDHD1,MAPK1IP1L	-24780,-288
chr17:79876229-79876444	chr17	+	79876255	79876389	True	NM_016538,NR_015454,NM_002861,NM_002359,NM_001184917,NM_032711,NR_033682,NR_033683,NR_033681,NR_033685	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,-,-,-,-,-,-,-,-	SIRT7,LOC92659,PCYT2,MAFG,PCYT2,MAFG,PCYT2,PCYT2,PCYT2,PCYT2	-197,9315,-6915,9249,-6915,5069,-6915,-7178,-6915,-7178
chr6:83895202-83895821	chr6	+	83895522	83895866	True	NM_001199917,NM_001199918,NM_001199919,NM_015599,NM_033411	chr6,chr6,chr6,chr6,chr6	-,-,-,-,+	PGM3,PGM3,PGM3,PGM3,RWDD2A	7839,7196,7196,7196,7165
chr7:141894125-141895314	chr7	+	141894208	141894878	True	NR_024346,NR_003717	chr7,chr7	-,+	MOXD2P,LOC100124692	52058,-23290
chr22:25614080-25614343	chr22	+	25614237	25614345	True	NM_182492,NM_000496	chr22,chr22	-,+	LRP5L,CRYBB2	144229,1266
chr17:8647879-8648173	chr17	+	8647881	8648171	True	NM_001158261,NM_004822,NM_144681	chr17,chr17,chr17	-,+,-	CCDC42,NTN1,CCDC42	33,276687,33
chr16:29832066-29833006	chr16	+	29832161	29833029	True	NM_006319,NM_024516,NM_017458,NM_145239,NM_005115	chr16,chr16,chr16,chr16,chr16	-,+,+,+,+	CDIPT,C16orf53,MVP,PRRT2,MVP	41599,-4684,-497,-8803,-497
chr4:187118356-187119584	chr4	+	187118380	187119439	True	NM_207352,NM_021069	chr4,chr4	+,-	CYP4V2,SORBS2	-5757,-240510
chr8:41167080-41167425	chr8	+	41167087	41167298	True	NM_001174124,NM_003012	chr8,chr8	+,-	GOLGA7,SFRP1	180782,-97
chr21:45720773-45721060	chr21	+	45720793	45721089	True	NR_024108,NM_002626,NM_004928	chr21,chr21,chr21	+,+,-	PFKL,PFKL,C21orf2	-919,-914,38246
chr10:64336391-64336836	chr10	+	64336711	64336839	True	NM_000399,NM_199452	chr10,chr10	-,+	EGR2,ZNF365	239337,-56555
chr2:231860894-231861139	chr2	+	231860899	231861167	True	NR_033879,NM_139073	chr2,chr2	-,+	LOC348761,SPATA3	-152,-111
chrX:51075023-51075393	chrX	+	51075029	51075309	True	NM_018159,NM_153183	chrX,chrX	-,+	NUDT11,NUDT10	164200,3
chr2:234600113-234601802	chr2	+	234600157	234601803	True	NM_001072,NM_001001394,NM_019077,NM_205862	chr2,chr2,chr2,chr2	+,-,+,+	UGT1A6,DNAJB3,UGT1A7,UGT1A6	42,50908,-9624,113
chr5:742501-743799	chr5	+	742528	743846	True	NM_018140,NM_007030	chr5,chr5	+,-	CEP72,TPPP	-130174,-49018
chr5:742501-743799	chr5	+	834715	835909	False	NM_001166260,NM_024786	chr5,chr5	+,-	TRIP13,ZDHHC11	57059,15243
chr4:171014503-171014837	chr4	+	171014607	171014744	True	NM_016228,NM_182662,NM_173872	chr4,chr4,chr4	-,-,+	AADAT,AADAT,CLCN3	-3424,-3235,-472936
chr10:133111980-133112324	chr10	+	133112045	133112351	True	NM_018461,NM_174937	chr10,chr10	+,-	PPP2R2D,TCERG1L	635608,-2061
chr20:1369549-1370171	chr20	+	1369632	1370094	True	NR_037661,NM_000801,NM_014723,NM_054014,NM_001199786	chr20,chr20,chr20,chr20,chr20	-,-,+,-,-	FKBP1A-SDCBP2,FKBP1A,SNPH,FKBP1A,FKBP1A	3772,3772,-122723,3772,3772
chr4:54420151-54420941	chr4	+	54420196	54420568	True	NM_032622,NM_030917	chr4,chr4	-,+	LNX1,FIP1L1	3918,-176427
chr2:132250327-132250529	chr2	+	132250367	132250439	True	NM_001085365,NR_026922	chr2,chr2	-,+	MZT2A,LOC150776	-303,-32
chr1:1362343-1362656	chr1	+	1362405	1362671	True	NM_199121,NM_022834,NR_026871,NM_001146685,NM_001145210	chr1,chr1,chr1,chr1,chr1	+,+,-,+,-	VWA1,VWA1,LOC441869,TMEM88B,LOC441869	8231,8231,-5755,-948,-5755
chr17:203027-203390	chr17	+	203127	203433	True	NM_001190412,NM_001190413,NM_001190411,NM_001013672,NM_006987	chr17,chr17,chr17,chr17,chr17	-,-,-,+,-	RPH3AL,RPH3AL,RPH3AL,C17orf97,RPH3AL	-494,-494,-494,56684,-494
chr5:141060854-141061446	chr5	+	141060943	141061359	True	NM_022481,NM_173828	chr5,chr5	-,+	ARAP3,RELL2	491,-44477
chr14:24563824-24564065	chr14	+	24563856	24564012	True	NM_001018073,NM_006177,NM_004563	chr14,chr14,chr14	+,-,+	PCK2,NRL,PCK2	-424,-10024,-424
chr5:54317486-54317921	chr5	+	54317572	54317946	True	NM_002104,NM_007036	chr5,chr5	+,-	GZMK,ESM1	2160,-36158
chr13:30949591-30951154	chr13	+	30949609	30950997	True	NM_005800,NR_024464	chr13,chr13	+,-	USPL1,LOC100188949	240832,-1573
chr17:7253418-7253692	chr17	+	7253509	7253573	True	NM_032442,NM_198154,NM_001002914	chr17,chr17,chr17	-,+,+	NEURL4,TMEM95,KCTD11	-20871,4923,1634
chr2:130986353-130986641	chr2	+	130986355	130986647	True	NM_025029,NM_207312	chr2,chr2	+,-	MZT2B,TUBA3E	-46905,-30321
chr2:54363832-54364947	chr2	+	54364181	54364539	True	NM_001003937,NM_138448	chr2,chr2	-,+	TSPYL6,ACYP2	118924,-21832
chr2:74009160-74010303	chr2	+	74009541	74010320	True	NM_001080474,NM_003584	chr2,chr2	+,-	C2orf78,DUSP11	995,-2257
chr16:71263045-71264156	chr16	+	71263395	71263736	True	NM_032821,NM_001198542,NM_001198543,NM_001740,NM_017558	chr16,chr16,chr16,chr16,chr16	-,-,-,+,-	HYDIN,HYDIN,HYDIN,CALB2,HYDIN	898,954,954,128879,921
chr5:145561797-145562008	chr5	+	145561844	145561960	True	NM_020117,NM_018989	chr5,chr5	-,+	LARS,RBM27	384,21202
chr17:79908726-79909367	chr17	+	79908726	79908982	True	NM_001145113,NR_015454	chr17,chr17	-,+	MYADML2,LOC92659	-3617,-23075
chr10:43632734-43633290	chr10	+	43632912	43633242	True	NM_018590,NM_145313	chr10,chr10	+,-	CSGALNACT2,RASGEF1A	691,129175
chr19:35224321-35224736	chr19	+	35224330	35224752	True	NM_001029997,NM_001007248,NM_001145665	chr19,chr19,chr19	+,-,+	ZNF181,ZNF599,ZNF181	727,39432,727
chr1:51970647-51971717	chr1	+	51970799	51971290	True	NM_001981,NM_024586	chr1,chr1	-,+	EPS15,OSBPL9	13766,111255
chr19:37700298-37700708	chr19	+	37700376	37700627	True	NM_152279,NM_152604	chr19,chr19	-,+	ZNF585B,ZNF383	885,16738
chr16:14404827-14405431	chr16	+	14404943	14405257	True	NR_029854,NM_001134477,NR_030177	chr16,chr16,chr16	+,-,+	MIR365-1,PARN,MIR193B	-1852,318913,-7170
chr12:54393845-54394056	chr12	+	54393986	54394056	True	NR_029617,NM_006897,NM_022658,NR_003716	chr12,chr12,chr12,chr12	+,+,+,-	MIR196A2,HOXC9,HOXC8,HOTAIR	-8515,-160,8833,-31471
chrX:149630257-149630858	chrX	+	149630421	149630879	True	NM_005491,NM_001184808	chrX,chrX	+,-	MAMLD1,CD99L2	-16753,436460
chr2:119980581-119980798	chr2	+	119980661	119980847	True	NM_182528,NM_001008410,NM_018234,NM_182915	chr2,chr2,chr2,chr2	-,+,+,+	C1QL2,STEAP3,STEAP3,STEAP3	-64190,536,536,536
chr9:127115978-127116798	chr9	+	127116057	127116712	True	NM_002799,NR_027406	chr9,chr9	-,+	PSMB7,LOC100129034	61060,-356
chr9:35792249-35792463	chr9	+	35792256	35792452	True	NM_003995,NM_172312	chr9,chr9	+,-	NPR2,SPAG8	-47,19857
chr10:91011653-91013249	chr10	+	91011790	91012884	True	NM_001127605,NM_001547,NM_000235	chr10,chr10,chr10	-,+,-	LIPA,IFIT2,LIPA	-130,48821,-130
chr9:127630247-127631017	chr9	+	127630382	127630911	True	NM_007209,NM_030978	chr9,chr9	-,+	RPL35,ARPC5L	-6142,572
chr17:17739113-17739405	chr17	+	17739123	17739415	True	NM_001005291,NM_004176,NM_001130091	chr17,chr17,chr17	-,-,+	SREBF1,SREBF1,LRRC48	960,960,136711
chr12:20997886-20998086	chr12	+	20997988	20998124	True	NM_019844,NM_021094	chr12,chr12	+,-	SLCO1B3,SLCO1A2	-34411,489758
chr19:3985002-3985243	chr19	+	3985001	3985225	True	NR_002602,NM_015897,NM_001961	chr19,chr19,chr19	-,+,-	SNORD37,PIAS4,EEF2	-2431,22523,286
chr19:17337865-17338306	chr19	+	17337874	17338136	True	NM_005234,NM_024578	chr19,chr19	-,+	NR2F6,OCEL1	18065,-870
chr17:7137775-7138544	chr17	+	7137821	7138511	True	NM_001033859,NM_024297,NM_007278,NM_004422	chr17,chr17,chr17,chr17	+,-,-,-	ACADVL,PHF23,GABARAP,DVL2	-14719,4364,7292,42
chr5:154237446-154238122	chr5	+	154237517	154238158	True	NM_032385,NM_004779	chr5,chr5	-,+	C5orf4,CNOT8	-7304,39
chr11:117855843-117856652	chr11	+	117855899	117856484	True	NR_026691,NM_001077263,NM_001558	chr11,chr11,chr11	+,-,+	IL10RA,TMPRSS13,IL10RA	621,-55784,621
chr5:31532531-31532854	chr5	+	31532642	31532872	True	NM_018356,NM_013235,NM_001100412	chr5,chr5,chr5	+,-,-	C5orf22,DROSHA,DROSHA	-320,-360,-360
chr7:128044272-128045443	chr7	+	128044435	128045377	True	NM_000883,NM_001142576,NM_001142574,NM_001142575,NM_001142573,NM_183243,NM_001098786,NM_001102605	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,-,+,-	IMPDH1,IMPDH1,IMPDH1,IMPDH1,IMPDH1,IMPDH1,C7orf68,IMPDH1	4709,4709,697,697,697,4709,50506,4709
chr6:155634881-155635199	chr6	+	155634880	155635166	True	NM_001001346,NM_016020	chr6,chr6	+,-	CLDN20,TFB1M	-49791,501
chrX:153606149-153606425	chrX	+	153606244	153606474	True	NM_001110556,NM_000117,NM_001456	chrX,chrX,chrX	-,+,-	FLNA,EMD,FLNA	-3238,1122,-3238
chr16:67977108-67977458	chr16	+	67977360	67977430	True	NM_006742,NM_002801,NM_000229	chr16,chr16,chr16	+,-,-	PSKH1,PSMB10,LCAT	-50236,-6580,635
chr4:24582434-24582744	chr4	+	24582433	24582648	True	NM_001358,NM_003102	chr4,chr4	-,+	DHX15,SOD3	3595,214436
chr2:26217562-26218789	chr2	+	26217600	26218610	True	NM_002254,NM_016131	chr2,chr2	-,+	KIF3C,RAB10	-12157,38118
chr12:49582571-49582917	chr12	+	49582632	49582898	True	NM_006009,NM_032704	chr12,chr12	-,+	TUBA1A,TUBA1C	13,75966
chr19:48738866-48739560	chr19	+	48738934	48739424	True	NR_033679,NM_001184900,NM_153608	chr19,chr19,chr19	-,-,+	CARD8,CARD8,ZNF114	4946,4946,35229
chr12:117533171-117534764	chr12	+	117533198	117534487	True	NM_001168325,NM_153348,NM_017899,NR_031766	chr12,chr12,chr12,chr12	-,+,-,-	TESC,FBXW8,TESC,TESC	2821,-184492,2821,2821
chr16:87418051-87418307	chr16	+	87418060	87418250	True	NM_022818,NM_024735,NR_024568	chr16,chr16,chr16	+,-,-	MAP1LC3B,FBXO31,FBXO31	7550,-666,7508
chr1:26634611-26636333	chr1	+	26634805	26636244	True	NM_145345,NM_001803,NM_183008,NM_001077262	chr1,chr1,chr1,chr1	-,+,-,-	UBXN11,CD52,UBXN11,UBXN11	8563,8166,-1610,-1610
chr11:122849805-122850114	chr11	+	122849816	122850052	True	NR_027288,NM_001098169	chr11,chr11	+,-	LOC341056,BSX	38221,2377
chr10:31617231-31618715	chr10	+	31617231	31618763	True	NM_001174093,NM_001174094,NM_001174095,NM_001174096,NM_030751,NR_024284,NM_001128128	chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,-,+	ZEB1,ZEB1,ZEB1,ZEB1,ZEB1,LOC220930,ZEB1	-9189,-7226,-9189,-9189,-9189,-9207,-7226
chr5:34915410-34915634	chr5	+	34915531	34915673	True	NR_026591,NM_018321,NM_002853	chr5,chr5,chr5	-,+,-	RAD1,BRIX1,RAD1	108,146,157
chr1:202317971-202319153	chr1	+	202318208	202319074	True	NM_001167858,NM_002481,NM_014176,NM_001167857	chr1,chr1,chr1,chr1	+,+,-,+	PPP1R12B,PPP1R12B,UBE2T,PPP1R12B	-429,-429,-7114,-429
chr5:138775268-138775777	chr5	+	138775286	138775582	True	NM_001033112,NM_152686	chr5,chr5	+,-	PAIP2,DNAJC18	-97203,-72
chr6:42948839-42950010	chr6	+	42949147	42949751	True	NM_006245,NM_180976,NM_000287,NM_180977	chr6,chr6,chr6,chr6	+,+,-,+	PPP2R5D,PPP2R5D,PEX6,PPP2R5D	2578,2578,-2166,2578
chr17:54248638-54250178	chr17	+	54248670	54250178	True	NM_153228,NM_001099640	chr17,chr17	+,-	ANKFN1,TMEM100	-17885,-439188
chr11:59821675-59823008	chr11	+	59821808	59822916	True	NM_006138,NM_001031809,NM_001031666,NM_152851	chr11,chr11,chr11,chr11	+,+,+,-	MS4A3,MS4A3,MS4A3,MS4A6A	1184,1184,1184,127814
chr6:35228691-35228945	chr6	+	35228692	35228942	True	NM_018679,NM_003427	chr6,chr6	-,+	TCP11,ZNF76	-119505,-1233
chrX:151136327-151137095	chrX	+	151136387	151137088	True	NR_029973,NM_004961,NM_001011550	chrX,chrX,chrX	-,-,+	MIR452,GABRE,MAGEA4	-8203,6120,-49678
chr7:96641818-96642318	chr7	+	96641817	96642336	True	NM_005222,NR_015448	chr7,chr7	+,-	DLX6,DLX6-AS1	-6580,1092
chr1:223893885-223894704	chr1	+	223893904	223894512	True	NM_001143962,NM_001146068,NM_001748	chr1,chr1,chr1	-,+,+	CAPN8,CAPN2,CAPN2	-40468,-4660,5606
chr3:37285260-37285486	chr3	+	37285268	37285432	True	NM_002078,NM_017724,NM_001172713	chr3,chr3,chr3	+,-,+	GOLGA4,LRRFIP2,GOLGA4	-637,-67417,-637
chr4:17804806-17805365	chr4	+	17804974	17805343	True	NM_017741,NM_022346	chr4,chr4	-,+	DCAF16,NCAPG	7089,7181
chr1:81674228-81674451	chr1	+	81674243	81674417	True	NM_022159,NM_012302	chr1,chr1	-,+	ELTD1,LPHN2	-2201748,591664
chr19:45871290-45872370	chr19	+	45871459	45872347	True	NM_001130867,NM_177417,NM_000400	chr19,chr19,chr19	-,+,-	ERCC2,KLC3,ERCC2	1548,-27513,1548
chr4:140201446-140201949	chr4	+	140201503	140201956	True	NM_057175,NM_032623	chr4,chr4	+,-	NAA15,C4orf49	20719,-11
chr1:223126096-223126371	chr1	+	223126238	223126332	True	NM_032890,NM_003268	chr1,chr1	+,-	DISP1,TLR5	-137868,190352
chr7:64991593-64992049	chr7	+	64991804	64992046	True	NM_000181,NR_027392	chr7,chr7	-,+	GUSB,INTS4L2	455313,120730
chr7:64991593-64992049	chr7	-	64629234	64629476	False	NR_027393,NM_001007253	chr7,chr7	+,-	INTS4L1,ERV3	-27690,-162110
chr7:64991593-64992049	chr7	-	65140441	65140683	False	NM_000181,NR_027392	chr7,chr7	-,+	GUSB,INTS4L2	306680,-27723
chrX:47372701-47373369	chrX	+	47373165	47373412	True	NM_001654,NM_153380	chrX,chrX	+,-	ARAF,ZNF41	47103,-30820
chr2:27631687-27631975	chr2	+	27631692	27631892	True	NM_177983,NM_013392	chr2,chr2	-,+	PPM1G,NRBP1	654,19580
chr7:74682478-74683151	chr7	+	74682763	74683171	True	NM_001003795,NR_003580	chr7,chr7	+,-	GTF2IRD2B,LOC100093631	-174476,-29304
chr7:74682478-74683151	chr7	+	99882889	99883133	False	NM_001004351,NR_028038	chr7,chr7	+,-	SPDYE3,GATS	22191,-13034
chr7:74682478-74683151	chr7	-	72539456	72539864	False	NR_003664,NR_003580	chr7,chr7	-,+	SPDYE8P,LOC100093631	-39147,29147
chr7:74682478-74683151	chr7	-	74348914	74349322	False	NM_001025202,NM_001145063	chr7,chr7	-,+	STAG3L2,GATSL1	-42183,29760
chr7:74682478-74683151	chr7	+	74897016	74897424	False	NM_001145064,NR_003664	chr7,chr7	-,+	GATSL2,SPDYE8P	-29675,39108
chr19:1105602-1106141	chr19	+	1105668	1105742	True	NM_001039847,NM_002085,NM_002695,NM_001039848	chr19,chr19,chr19,chr19	+,+,-,+	GPX4,GPX4,POLR2E,GPX4	-1783,-1783,-10277,-1070
chr16:5148454-5148669	chr16	+	5148582	5148644	True	NM_019109,NM_201400,NM_201598	chr16,chr16,chr16	+,-,-	ALG1,FAM86A,FAM86A	-26823,-793,-793
chrX:18707523-18707775	chrX	+	18707740	18707824	True	NM_000330,NM_152224,NM_152226,NM_006240	chrX,chrX,chrX,chrX	-,+,+,+	RS1,PPEF1,PPEF1,PPEF1	-17517,1220,1220,1220
chr5:101632312-101632765	chr5	+	101632454	101632625	True	NM_000919,NM_180991	chr5,chr5	+,-	PAM,SLCO4C1	568901,-201
chr18:74846052-74846590	chr18	+	74846099	74846468	True	NM_001480,NM_001025101,NM_001025100	chr18,chr18,chr18	+,-,-	GALR1,MBP,MBP	115539,-1325,-1325
chr1:210407538-210407894	chr1	+	210407571	210407929	True	NR_024337,NM_019605	chr1,chr1	-,+	C1orf133,SERTAD4	-105,-1427
chr7:63506675-63507283	chr7	+	63506691	63507323	True	NM_178558,NM_001159522	chr7,chr7	-,+	ZNF680,ZNF727	516232,-928
chr15:25434511-25435059	chr15	+	25434543	25435105	True	NR_003308,NR_003358,NR_003298,NR_003305,NR_003344,NR_003351,NR_003299,NM_130838,NR_003300,NR_003301,NR_003302,NR_003303,NR_003304,NR_003297,NR_003306	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,-,+,+,+,+,+,+,+	SNORD115-16,SNORD115-43,SNORD115-6,SNORD115-13,SNORD115-29,SNORD115-36,SNORD115-7,UBE3A,SNORD115-8,SNORD115-9,SNORD115-10,SNORD115-11,SNORD115-12,SNORD115-5,SNORD115-14	9489,-33,-8950,3362,-33,-33,-7062,215598,-5141,1457,1457,-33,1457,1460,4962
chr11:56081778-56082783	chr11	+	56081884	56082837	True	NM_001005199,NM_001005202	chr11,chr11	-,+	OR8H1,OR8K3	-23346,2945
chr11:124481556-124482915	chr11	+	124481590	124482941	True	NM_032811,NR_016021,NM_052959,NM_170601	chr11,chr11,chr11,chr11	+,+,+,-	TBRG1,TBRG1,PANX3,SIAE	9800,9800,-188,60886
chr20:4804201-4804420	chr20	+	4804201	4804289	True	NM_012409,NM_170774,NM_014737	chr20,chr20,chr20	+,-,-	PRND,RASSF2,RASSF2	-101696,-8432,52
chr2:51183066-51184569	chr2	+	51183199	51184591	True	NM_001135659,NM_006872	chr2,chr2	-,+	NRXN1,GTF2A1L	75134,-2338313
chr1:156738039-156738334	chr1	+	156738055	156738307	True	NM_001126050,NM_005973	chr1,chr1	-,+	HDGF,PRCC	-15815,-832
chrY:15017621-15017852	chrY	+	15017686	15017899	True	NM_004660,NM_001122665,NR_033667	chrY,chrY,chrY	+,+,-	DDX3Y,DDX3Y,GYG2P1	-1038,-1718,-484297
chr15:85173393-85174056	chr15	+	85173427	85173920	True	NM_032856,NR_004859,NR_003654	chr15,chr15,chr15	-,+,+	WDR73,SCAND2,SCAND2	23652,770,770
chr9:5525768-5526591	chr9	+	5526061	5526401	True	NM_025239,NM_018465	chr9,chr9	+,-	PDCD1LG2,C9orf46	-15567,-88201
chr7:36747760-36748352	chr7	+	36747759	36748353	True	NM_018685,NM_001177506	chr7,chr7	+,-	ANLN,AOAH	-318383,15853
chr4:11431165-11431370	chr4	+	11431169	11431416	True	NR_030298,NM_005114	chr4,chr4	+,-	MIR572,HS3ST1	-60769,-632
chr15:30119385-30119728	chr15	+	30119388	30119770	True	NM_003257,NR_026859,NM_175610	chr15,chr15,chr15	-,+,-	TJP1,FAM7A3,TJP1	-4682,276164,-4682
chr15:23255501-23257289	chr15	+	23255600	23257279	True	NR_024074,NR_003521	chr15,chr15	+,-	GOLGA8IP,WHAMML1	-409,-47243
chr15:23255501-23257289	chr15	-	28955530	28956211	False	NR_033351,NR_026589	chr15,chr15	-,+	GOLGA8F,WHAMML2	-177387,26517
chr16:75529424-75529720	chr16	+	75529465	75529758	True	NM_007285,NM_021615	chr16,chr16	+,-	GABARAPL2,CHST6	70490,-539
chr5:17218833-17219224	chr5	+	17218878	17219204	True	NR_027253,NM_006317	chr5,chr5	-,+	LOC285696,BASP1	-1347,-1179
chr4:139717919-139718614	chr4	+	139718027	139718497	True	NM_006874,NM_012118	chr4,chr4	-,+	ELF2,CCRN4L	287204,218445
chr6:27706196-27706684	chr6	+	27706205	27706359	True	NM_003509,NM_003519	chr6,chr6	+,-	HIST1H2AI,HIST1H2BL	69617,69400
chr20:23437741-23439338	chr20	+	23437981	23439221	True	NM_130794,NM_138283,NM_080830	chr20,chr20,chr20	-,+,-	CST11,CSTL1,CST11	-4499,-17717,-4499
chr17:61681552-61682042	chr17	+	61681711	61682071	True	NM_016360,NM_030576	chr17,chr17	+,-	TACO1,LIMD2	-3532,95498
chr7:137688306-137688906	chr7	+	137688464	137688918	True	NM_194071,NM_001190906	chr7,chr7	-,+	CREB3L2,AKR1D1	-1618,72259
chrX:15582331-15582537	chrX	+	15582391	15582479	True	NM_001721,NM_021804	chrX,chrX	+,-	BMX,ACE2	-57022,37777
chr8:145754654-145754858	chr8	+	145754758	145754900	True	NM_001001795,NM_001024678,NM_014665	chr8,chr8,chr8	-,-,+	C8orf82,LRRC24,LRRC14	-300,-2342,-11447
chr10:134971315-134971925	chr10	+	134971543	134971947	True	NR_030170,NM_152643	chr10,chr10	-,+	MIR202,KNDC1	89227,2023
chr9:18483679-18485220	chr9	+	18483918	18485234	True	NM_153707,NM_001040272,NM_052866	chr9,chr9,chr9	-,+,+	FAM154A,ADAMTSL1,ADAMTSL1	548073,-9873,-9873
chr1:46211645-46213180	chr1	+	46211824	46213202	True	NM_005897,NM_015112,NM_001145349	chr1,chr1,chr1	-,+,-	IPP,MAST2,IPP	3340,56082,3340
chr2:215958537-215960472	chr2	+	215958725	215960162	True	NM_173076,NM_004044	chr2,chr2	-,+	ABCA12,ATIC	43046,216516
chr22:42349189-42349620	chr22	+	42349264	42349634	True	NM_024053,NM_001002876,NR_024355	chr22,chr22,chr22	-,-,+	CENPM,CENPM,LOC339674	-6116,-6116,-1124
chr1:226489964-226491397	chr1	+	226490540	226491240	True	NM_173083,NM_031944	chr1,chr1	-,+	LIN9,MIXL1	6008,-79222
chr4:120987621-120987868	chr4	+	120987724	120987862	True	NM_002358,NR_037630	chr4,chr4	-,+	MAD2L1,LOC645513	201,-611837
chr17:42083886-42084095	chr17	+	42083894	42084076	True	NM_004160,NM_032376,NM_153006	chr17,chr17,chr17	-,-,+	PYY,TMEM101,NAGS	-2057,8319,-1913
chr7:63025435-63025760	chr7	+	63025477	63025682	True	NR_028349,NR_036246	chr7,chr7	-,+	LOC100287834,MIR4283-1	-166058,55785
chr7:63025435-63025760	chr7	-	57079278	57079359	False	NR_036270,NR_036102	chr7,chr7	-,+	MIR4283-2,MIR3147	-55707,393371
chr7:63025435-63025760	chr7	+	5344988	5345170	False	NM_153247,NM_001080495	chr7,chr7	+,-	SLC29A4,TNRC18	-22478,118065
chr2:74533116-74534799	chr2	+	74533536	74534753	True	NR_024463,NM_021196	chr2,chr2	+,-	LOC100189589,SLC4A5	78091,7449
chr2:132479639-132480736	chr19	-	45406849	45406903	True	NM_145288,NM_000041	chr19,chr19	-,+	ZNF296,APOE	172839,2135
chr12:18407882-18409503	chr12	+	18408419	18409379	True	NM_004570,NM_024730	chr12,chr12	+,-	PIK3C2G,RERGL	5094,-165305
chr7:134916395-134917277	chr7	+	134916415	134917159	True	NM_014149,NM_182489	chr7,chr7	-,+	WDR91,STRA8	-20099,51
chr7:139762062-139762304	chr7	+	139762144	139762238	True	NM_022750,NR_024451	chr7,chr7	-,+	PARP12,LOC100134229	1333,114822
chr17:63055120-63055719	chr17	+	63055477	63055736	True	NM_006572,NM_001165933	chr17,chr17	-,+	GNA13,RGS9	-2557,77719
chr19:40730669-40731125	chr19	+	40730806	40730974	True	NM_002446,NM_152479,NM_024877	chr19,chr19,chr19	+,-,-	MAP3K10,TTC9B,CNTD2	-33206,-6500,1673
chr4:2262644-2263049	chr4	+	2262708	2263015	True	NM_001193282,NM_006454	chr4,chr4	+,-	LOC402160,MXD4	157685,774
chr11:537656-538597	chr11	+	538081	538535	True	NM_176795,NM_001130442,NM_005343,NM_198075	chr11,chr11,chr11,chr11	-,-,-,+	HRAS,HRAS,HRAS,LRRC56	-2531,-2531,-2531,-610
chr7:6686248-6686672	chr7	+	6686255	6686715	True	NM_017560,NM_006956	chr7,chr7	+,-	ZNF853,ZNF12	-30779,59901
chrX:33197665-33198246	chrX	+	33197846	33198302	True	NM_004006,NM_152631	chrX,chrX	-,+	DMD,FAM47B	31429,1762610
chr12:64183196-64184393	chr12	+	64183413	64184281	True	NM_014254,NM_173812	chr12,chr12	+,-	TMEM5,DPY19L2	-9833,-121059
chr14:67825321-67825737	chr14	+	67825455	67825783	True	NM_004094,NM_015994	chr14,chr14	+,-	EIF2S1,ATP6V1D	1250,987
chr19:22867204-22868477	chr19	+	22867429	22868181	True	NM_020855,NM_001080409	chr19,chr19	+,-	ZNF492,ZNF99	-50368,84656
chr14:20923426-20924015	chr14	+	20923477	20924033	True	NM_001641,NM_017807,NM_001100814,NM_080649,NM_080648,NM_144568	chr14,chr14,chr14,chr14,chr14,chr14	+,-,-,+,+,-	APEX1,OSGEP,TMEM55B,APEX1,APEX1,TMEM55B	-238,-210,5654,-238,-238,5654
chr2:204398973-204399267	chr2	+	204399066	204399315	True	NM_203365,NM_213589,NM_006139	chr2,chr2,chr2	-,-,+	RAPH1,RAPH1,CD28	793,793,171882
chr19:58864614-58864819	chr19	+	58864774	58864838	True	NM_198458,NM_130786,NR_015380	chr19,chr19,chr19	-,-,+	ZNF497,A1BG,A1BG-AS1	9332,77,-1489
chr5:159827050-159827665	chr5	+	159827190	159827692	True	NM_022090,NM_004219	chr5,chr5	-,+	C5orf54,PTTG1	-130,21172
chr16:30364893-30365109	chr16	+	30365004	30365156	True	NM_006110,NM_013292,NR_024465	chr16,chr16,chr16	-,+,-	CD2BP2,MYLPF,CD2BP2	1576,20966,1149
chr6:10021121-10022689	chr6	+	10022065	10022669	True	NM_001032280,NR_033910	chr6,chr6	-,+	TFAP2A,LOC100130275	389994,389881
chrX:6145903-6146946	chrX	+	6146236	6146824	True	NM_020742,NM_000351,NM_181332	chrX,chrX,chrX	-,+,-	NLGN4X,STS,NLGN4X	-348,990647,-60
chr6:14803999-14804392	chr6	+	14804058	14804352	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	442174,858987
chr19:55668103-55668378	chr19	+	55668110	55668262	True	NM_001126132,NM_001126133,NM_017729,NM_178837,NM_000363,NM_003283	chr19,chr19,chr19,chr19,chr19,chr19	-,-,+,-,-,-	TNNT1,TNNT1,EPS8L1,C19orf51,TNNI3,TNNT1	-7504,-7504,-76401,9806,888,-7504
chr4:128802260-128802541	chr4	+	128802276	128802590	True	NM_001190801,NM_001190799,NM_152778,NM_014264	chr4,chr4,chr4,chr4	+,+,-,+	PLK4,PLK4,MFSD8,PLK4	62,-311,84599,-311
chr11:10712817-10713314	chr11	+	10712830	10713312	True	NM_001100167,NM_130385,NM_014633,NM_001100163	chr11,chr11,chr11,chr11	-,-,+,-	MRVI1,MRVI1,CTR9,MRVI1	1843,2273,59498,2273
chr4:164513965-164515269	chr4	+	164513970	164515253	True	NM_017923,NM_018352	chr4,chr4	-,+	MARCH1,C4orf43	19574,-98348
chr16:80841935-80843380	chr16	+	80842015	80843248	True	NM_152342,NM_018455	chr16,chr16	-,+	CDYL2,CENPN	-3840,196854
chr3:10331492-10332133	chr3	+	10331609	10332117	True	NM_001134941,NM_001134946,NM_001134944,NM_001134945,NR_026829,NR_024138,NR_004431,NR_024146,NM_016362,NR_024145,NR_024144,NR_024132,NR_024133,NR_024134,NR_024135,NR_024136,NR_024137	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,+,-,+,+,-,+,+,-,-,-,-,-,-	GHRL,GHRL,GHRL,GHRL,C3orf42,GHRL,GHRLOS,GHRLOS,GHRL,GHRLOS,GHRLOS,GHRL,GHRL,GHRL,GHRL,GHRL,GHRL	352,2564,2564,2564,-5557,2564,-4222,-4222,352,-4222,-4222,2564,2564,2564,2564,2564,2564
chr1:171457887-171459149	chr1	+	171457901	171458937	True	NM_000261,NM_015172	chr1,chr1	-,+	MYOC,PRRC2C	162886,-3298
chr17:39554652-39555319	chr17	+	39554956	39555046	True	NM_002277,NM_030975	chr17,chr17	-,+	KRT31,KRTAP9-9	-1112,-143378
chr17:57655549-57657493	chr17	+	57655662	57657370	True	NM_016077,NM_024612	chr17,chr17	-,+	PTRH2,DHX40	127543,-12831
chr17:57655549-57657493	chr17	-	58072862	58074566	False	NM_003161,NR_002924	chr17,chr17	+,-	RPS6KB1,DHX40P1	-102477,21824
chr6:35658105-35658705	chr6	+	35658259	35658510	True	NM_004117,NM_145028,NM_001145777,NM_001145776	chr6,chr6,chr6,chr6	-,+,-,-	FKBP5,C6orf81,FKBP5,FKBP5	-1540,46348,-1540,-1567
chr4:151505074-151505381	chr4	+	151505209	151505416	True	NM_006439,NM_001199282	chr4,chr4	+,-	MAB21L2,LRBA	-2183,431077
chr11:60552165-60552690	chr11	+	60552222	60552692	True	NM_206893,NM_004778	chr11,chr11	+,-	MS4A10,GPR44	128,70802
chr5:41933972-41934324	chr5	+	41934103	41934349	True	NM_033484,NM_012176,NM_000436	chr5,chr5,chr5	+,+,-	FBXO4,FBXO4,OXCT1	-8807,-8807,-63312
chr6:80203856-80204753	chr6	+	80203895	80204772	True	NM_031469,NM_001122769	chr6,chr6	+,-	SH3BGRL2,LCA5	136227,42425
chr2:121223213-121223602	chr2	+	121223218	121223630	True	NM_002193,NR_027181	chr2,chr2	+,-	INHBB,LOC84931	-119553,345
chr19:43099843-43100113	chr19	+	43099920	43100030	True	NM_001816,NR_036584	chr19,chr19	-,+	CEACAM8,LOC100289650	-838,225984
chr10:103814977-103815388	chr10	+	103815108	103815430	True	NM_024747,NM_024541	chr10,chr10	+,-	HPS6,C10orf76	9693,552
chr15:78218716-78218961	chr15	+	78218782	78218900	True	NM_001101404,NR_027024	chr15,chr15	+,-	SH2D7,LOC645752	166026,338
chr15:78218716-78218961	chr15	-	72947349	72947545	False	NR_002780,NM_018652	chr15,chr15	-,+	HIGD2B,GOLGA6B	31141,-508
chr15:78218716-78218961	chr15	-	75551210	75551406	False	NR_030360,NM_001164404	chr15,chr15	-,+	MIR631,GOLGA6C	94816,-508
chr15:78218716-78218961	chr15	-	75575487	75575683	False	NR_030360,NM_001145224	chr15,chr15	-,+	MIR631,GOLGA6D	70539,-502
chr16:14408417-14409776	chr16	+	14408457	14409792	True	NR_029854,NM_001134477	chr16,chr16	+,-	MIR365-1,PARN	-5366,314378
chr11:69189178-69189419	chr11	+	69189236	69189340	True	NM_153451,NM_138768	chr11,chr11	-,+	ORAOV1,MYEOV	300875,-127665
chr10:60113782-60114330	chr10	+	60113820	60114166	True	NM_152230,NM_003338	chr10,chr10	-,+	IPMK,UBE2D1	-86126,-19139
chr15:85425616-85426085	chr15	+	85425912	85426132	True	NM_201651,NM_004213,NM_014300	chr15,chr15,chr15	+,+,-	SLC28A1,SLC28A1,SEC11A	1780,1780,-166238
chr12:114398986-114399515	chr12	+	114399123	114399481	True	NM_016196,NM_001146699,NM_001146698,NM_138432	chr12,chr12,chr12,chr12	-,-,-,+	RBM19,RBM19,RBM19,SDSL	4745,4745,4745,-538966
chr4:128648203-128649230	chr4	+	128648341	128649237	True	NM_152778,NM_031291	chr4,chr4	-,+	MFSD8,SLC25A31	237952,2317
chr6:8105682-8107082	chr6	+	8105830	8107104	True	NM_001135650,NR_027712,NR_037618,NM_004280	chr6,chr6,chr6,chr6	-,+,-,-	EEF1E1,PIP5K1P1,EEF1E1-MUTED,EEF1E1	-3002,-119547,-3002,-3002
chr11:278087-278448	chr11	+	278320	278404	True	NM_001025295,NM_138329	chr11,chr11	-,+	IFITM5,NLRP6	21172,165
chr6:82463784-82464892	chr6	+	82463949	82464699	True	NM_006670,NM_017633	chr6,chr6	+,-	TPBG,FAM46A	608223,-1521
chr3:152029903-152031105	chr3	+	152030085	152030724	True	NM_207297,NM_001123228	chr3,chr3	+,-	MBNL1,TMEM14E	-12952,28114
chr1:9087044-9087561	chr1	+	9087548	9087610	True	NM_001215,NM_207420	chr1,chr1	+,-	CA6,SLC2A7	-81677,-1144
chr11:63270786-63271193	chr11	+	63270895	63271121	True	NM_001142536,NM_001142537,NM_001142535,NM_033101,NM_001142538,NM_054108	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,-	LGALS12,LGALS12,LGALS12,LGALS12,LGALS12,HRASLS5	2402,4337,2402,2402,4337,-12215
chr11:7274852-7275283	chr11	+	7274899	7275317	True	NM_013249,NM_175733	chr11,chr11	-,+	ZNF214,SYT9	-233313,-1770
chr12:121352812-121353455	chr12	+	121352817	121353065	True	NM_139015,NM_000545	chr12,chr12	-,+	SPPL3,HNF1A	-10666,63483
chr8:65489046-65489607	chr8	+	65489073	65489596	True	NM_152414,NR_015374	chr8,chr8	+,-	BHLHE22,LOC401463	3198,281
chr19:18338577-18339310	chr19	+	18338664	18339231	True	NM_001098819,NM_001098818,NM_032683	chr19,chr19,chr19	-,-,+	PDE4C,PDE4C,MPV17L2	-3361,-1416,-34675
chr7:100662114-100662378	chr7	+	100662172	100662250	True	NM_003378,NM_001040105	chr7,chr7	-,+	VGF,MUC17	146652,1113
chr15:32765448-32767315	chr15	+	32765991	32767060	True	NR_027470,NM_199357	chr15,chr15	-,+	FAM7A2,ARHGAP11A	-38741,140630
chr15:32765448-32767315	chr15	-	23247069	23247127	False	NR_024074,NR_003521	chr15,chr15	+,-	GOLGA8IP,WHAMML1	8114,-38712
chr15:32765448-32767315	chr15	-	32866420	32867480	False	NM_199357,NR_036650	chr15,chr15	+,-	ARHGAP11A,LOC100288615	40210,-40478
chr15:32765448-32767315	chr15	+	30724610	30725679	False	NM_148911,NR_026858	chr15,chr15	-,+	CHRFAM7A,FAM7A1	-38746,139078
chr15:32765448-32767315	chr15	-	30824964	30826033	False	NM_148911,NR_026858	chr15,chr15	-,+	CHRFAM7A,FAM7A1	-139100,38724
chr7:43942233-43942531	chr7	+	43942232	43942566	True	NM_017920,NM_001204871,NM_001077663,NM_015983	chr7,chr7,chr7,chr7	-,-,-,+	URGCP,URGCP-MRPS24,URGCP,UBE2D4	3723,3723,3723,23468
chr5:140530497-140531446	chr5	+	140530636	140531050	True	NR_001280,NM_031947,NM_018939	chr5,chr5,chr5	+,-,+	PCDHB17,SLC25A2,PCDHB6	4529,152612,-848
chr14:50155328-50155838	chr14	+	50155379	50155750	True	NM_172193,NM_001197330,NM_001197331,NM_002692	chr14,chr14,chr14,chr14	+,-,-,-	KLHDC1,POLE2,POLE2,POLE2	4072,-281,-281,-281
chr5:179219672-179219987	chr5	+	179219701	179219945	True	NM_054013,NR_031598,NM_145867	chr5,chr5,chr5	-,-,+	MGAT4B,MIR1229,LTC4S	9980,5451,1040
chr11:64358878-64359262	chr11	+	64359012	64359238	True	NM_153378,NM_144585,NM_138734	chr11,chr11,chr11	+,+,-	SLC22A12,SLC22A12,NRXN2	-781,-781,51599
chr3:46741154-46741763	chr3	+	46741183	46741717	True	NM_001190707,NM_147196,NR_033815,NM_147129	chr3,chr3,chr3,chr3	-,+,-,-	ALS2CL,TMIE,ALS2CL,ALS2CL	-6037,1105,-5989,-5989
chr1:113466327-113467174	chr1	+	113466399	113467126	True	NR_002796,NM_001166496	chr1,chr1	+,-	AKR7A2P1,SLC16A1	-478,31612
chr1:156253071-156254147	chr1	+	156253113	156253875	True	NR_026678,NM_015327,NM_032323	chr1,chr1,chr1	+,-,+	TMEM79,SMG5,TMEM79	-467,-493,194
chr14:72427658-72429020	chr14	+	72427769	72428954	True	NM_004296,NM_012074	chr14,chr14	+,-	RGS6,DPF3	-28035,931912
chr17:7462981-7463771	chr17	+	7463178	7463800	True	NM_172087,NM_003808,NR_037926,NM_172088,NM_006942,NM_001198624,NM_015670,NM_001198623,NM_001198622	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,-,+,+,+,+	TNFSF13,TNFSF13,SENP3-EIF4A1,TNFSF13,SOX15,TNFSF13,SENP3,TNFSF13,TNFSF13	-1620,-1620,1508,-1620,29738,-1620,1508,-1620,-1620
chr14:70542970-70544279	chr14	+	70543318	70544306	True	NM_022137,NM_001130417,NM_182936	chr14,chr14,chr14	+,-,-	SMOC1,SLC8A3,SLC8A3	-197255,2667,2662
chr1:202441271-202442973	chr1	+	202441471	202442822	True	NM_032103,NM_014176,NM_032104	chr1,chr1,chr1	+,-,+	PPP1R12B,UBE2T,PPP1R12B	-9659,-130377,-9659
chr17:46806122-46806443	chr17	+	46806154	46806446	True	NR_036150,NR_024103,NM_032391,NM_006361	chr17,chr17,chr17,chr17	-,+,-,-	MIR3185,NCRNA00253,PRAC,HOXB13	-4317,-5666,-6272,-43
chr4:53580156-53581484	chr4	+	53580369	53581513	True	NR_024031,NM_022832,NR_003016	chr4,chr4,chr4	+,-,+	KIAA0114,USP46,SNORA26	-1812,-54867,-1017
chr5:140346998-140347200	chr5	+	140347062	140347238	True	NM_018899,NM_031883,NM_002109	chr5,chr5,chr5	+,+,-	PCDHAC2,PCDHAC2,HARS	-1366,-761,-276091
chr20:17950706-17952468	chr20	+	17950770	17952423	True	NR_003045,NM_152227,NM_014426,NM_052865	chr20,chr20,chr20,chr20	-,-,-,+	SNORD17,SNX5,SNX5,C20orf72	-7181,-1280,-1616,-1059
chr9:111884163-111885037	chr9	+	111884484	111884892	True	NM_032012,NM_017832	chr9,chr9	-,+	C9orf5,C9orf6	-2259,-187874
chr12:6950171-6950805	chr12	+	6950464	6950794	True	NM_002075,NM_031299	chr12,chr12	+,-	GNB3,CDCA3	-1140,9712
chr2:71293702-71294908	chr2	+	71293754	71294769	True	NM_032601,NM_017567	chr2,chr2	-,+	MCEE,NAGK	62682,638
chr5:55770651-55770901	chr5	+	55770660	55770940	True	NM_024669,NM_005921	chr5,chr5	-,+	ANKRD55,MAP3K1	-241474,339959
chr14:105645832-105646468	chr14	+	105645967	105646501	True	NM_177533,NM_033271	chr14,chr14	-,+	NUDT14,BTBD6	1209,68377
chr8:8020289-8020828	chr8	+	8020795	8020859	True	NR_031689,NR_024362	chr8,chr8	-,+	MIR548I3,FLJ10661	-74184,65232
chr8:8020289-8020828	chr8	-	12359829	12359893	False	NR_026789,NM_001137610	chr8,chr8	+,-	FAM66A,FAM86B2	-140352,-65977
chr1:206940445-206941233	chr1	+	206940688	206940960	True	NM_153758,NM_000572	chr1,chr1	+,-	IL19,IL10	31254,4943
chr6:27798696-27799101	chr6	+	27798756	27798882	True	NM_021968,NM_003510,NM_003520,NM_003541	chr6,chr6,chr6,chr6	+,-,+,-	HIST1H4J,HIST1H2AK,HIST1H2BN,HIST1H4K	-6904,7285,7557,473
chr9:77568927-77569325	chr9	+	77568995	77569296	True	NM_012383,NM_017998	chr9,chr9	+,-	OSTF1,C9orf40	134101,-1193
chr6:117091201-117092085	chr6	+	117091353	117091948	True	NM_001085480,NM_002269	chr6,chr6	-,+	FAM162B,KPNA5	-4467,-89037
chr15:68352004-68352805	chr15	+	68352243	68352689	True	NM_016166,NM_001031733	chr15,chr15	+,-	PIAS1,CALML4	-5732,145819
chr8:114449780-114450196	chr8	+	114449840	114450182	True	NR_031745,NM_052900,NM_198123	chr8,chr8,chr8	+,-,-	MIR2053,CSMD3,CSMD3	-794169,-598,-598
chr16:67359692-67359920	chr16	+	67359758	67359823	True	NM_018296,NM_001100915	chr16,chr16	+,-	LRRC36,KCTD19	923,889
chr3:120168750-120169434	chr3	+	120168777	120169368	True	NM_001168331,NM_007085	chr3,chr3	+,-	NDUFB4,FSTL1	145759,600
chr19:55051309-55052473	chr19	+	55051813	55052298	True	NR_026716,NM_145057	chr19,chr19	+,-	KIR3DX1,CDC42EP5	-7955,-67391
chr19:41096953-41097190	chr19	+	41096971	41097239	True	NM_001042544,NM_003573,NM_004756	chr19,chr19,chr19	+,+,-	LTBP4,LTBP4,NUMBL	5901,1832,99367
chr1:228742632-228743015	chr1	+	228742675	228742919	True	NR_037962,NM_033445	chr1,chr1	+,-	RHOU,HIST3H2A	37474,-97115
chr17:43213045-43213427	chr17	+	43213168	43213394	True	NM_024722,NM_001135704,NM_001135707,NM_001135706,NM_001135705,NM_133373	chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,-	ACBD4,ACBD4,ACBD4,ACBD4,ACBD4,PLCD3	-205,-3252,-205,-205,-205,-3277
chr17:26735469-26736135	chr17	+	26735489	26736058	True	NM_080669,NM_015077	chr17,chr17	-,+	SLC46A1,SARM1	-2261,-36553
chr8:71316371-71316655	chr8	+	71316406	71316670	True	NM_006540,NM_001011720	chr8,chr8	-,+	NCOA2,XKR9	-386,264929
chr9:124330202-124330454	chr9	+	124330217	124330465	True	NR_003191,NM_032552	chr9,chr9	-,+	GGTA1,DAB2IP	-67911,-869
chr19:22880250-22880650	chr19	+	22880543	22880645	True	NM_020855,NM_001080409	chr19,chr19	+,-	ZNF492,ZNF99	-63475,72189
chr10:43916418-43917637	chr10	+	43916558	43917205	True	NR_026693,NM_001098204	chr10,chr10	+,-	ZNF487P,HNRNPF	15368,-11862
chr1:26370828-26371896	chr1	+	26371041	26371855	True	NM_001004434,NM_032513,NM_004455	chr1,chr1,chr1	-,-,+	SLC30A2,SLC30A2,EXTL1	799,799,-22821
chr19:675946-676162	chr19	+	675958	676046	True	NM_005860,NM_194460	chr19,chr19	+,-	FSTL3,RNF126	342,-12725
chr19:2306765-2307168	chr19	+	2306829	2307215	True	NM_001101391,NM_001077238	chr19,chr19	-,+	LINGO3,SPPL2B	991,21413
chr14:22008670-22009437	chr14	+	22009340	22009400	True	NM_005407,NM_014828	chr14,chr14	-,+	SALL2,TOX4	-4003,-64056
chr21:47472463-47474150	chr21	+	47472628	47473617	True	NM_058174,NM_006657	chr21,chr21	+,-	COL6A2,FTCD	44415,101919
chr22:22990200-22990695	chr22	+	22990205	22990695	True	NM_199127,NR_024591	chr22,chr22	+,-	GGTLC2,POM121L1P	-1474,-3193
chr22:22990200-22990695	chr22	+	25024800	25025290	False	NR_024593,NR_024494	chr22,chr22	-,+	POM121L10P,BCRP3	29874,3591
chr22:22990200-22990695	chr20	-	23965368	23965424	False	NM_178312,NM_178311,NR_001279	chr20,chr20,chr20	-,-,+	GGTLC1,GGTLC1,CSTT	2138,4042,-465636
chr1:28846474-28846891	chr1	+	28846500	28846938	True	NM_001269,NM_001048195,NM_001048194,NR_003077	chr1,chr1,chr1,chr1	+,+,+,-	RCC1,RCC1,RCC1,SNORD99	-1813,-1813,-1813,58446
chr3:113560223-113561664	chr3	+	113560432	113561535	True	NM_017577,NM_025146	chr3,chr3	+,-	GRAMD1C,NAA50	-2806,-95312
chr1:151129671-151130077	chr1	+	151129701	151130077	True	NM_024575,NM_001204848,NR_037937,NM_001204856,NM_001136543,NM_024041,NM_212551	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,-,+,-	TNFAIP8L2,TNFAIP8L2-SCNM1,SCNM1,SCNM1,LYSMD1,SCNM1,LYSMD1	-647,-647,8420,8420,8397,8420,8343
chr7:76273231-76274764	chr7	+	76273611	76274627	True	NR_029411,NM_152992	chr7,chr7	+,-	LOC100133091,POMZP3	-95007,-16991
chr7:76273231-76274764	chr7	+	75088965	75089980	False	NM_001099415,NM_001099435	chr7,chr7	-,+	POM121C,SPDYE5	25638,34318
chr2:39912047-39913643	chr2	+	39912134	39913678	True	NM_152390,NM_025264	chr2,chr2	+,-	TMEM178,THUMPD2	-19160,92788
chr3:141594793-141595148	chr3	+	141594797	141595140	True	NM_001679,NM_001178140	chr3,chr3	+,-	ATP1B3,TFDP2	329,124139
chr15:90742773-90743888	chr15	+	90743126	90743936	True	NM_198925,NM_006384	chr15,chr15	+,-	SEMA4B,CIB1	625,33393
chr9:70917701-70917917	chr9	+	70917782	70917904	True	NR_015423,NM_199135	chr9,chr9	-,+	LOC572558,FOXD4L3	54903,-50
chr9:70917701-70917917	chr9	+	42717980	42718066	False	NR_026759,NM_199244,NM_001099279	chr9,chr9,chr9	-,+,+	FAM95B1,FOXD4L4,FOXD4L2	315296,-797,-797
chr9:70917701-70917917	chr9	-	69201575	69201625	False	NM_001085476,NM_001098805	chr9,chr9	-,+	FOXD4L6,ANKRD20A4	629,180355
chr9:70917701-70917917	chr9	-	70177982	70178068	False	NM_001126334,NR_024443	chr9,chr9	-,+	FOXD4L5,LOC100133920	797,-526672
chr9:70917701-70917917	chr9	-	70428898	70428984	False	NM_199244,NM_201453,NM_001099279	chr9,chr9,chr9	-,+,-	FOXD4L4,CBWD3,FOXD4L2	797,427854,797
chr8:25316334-25316759	chr8	+	25316368	25316516	True	NM_017634,NM_152562	chr8,chr8	-,+	KCTD9,CDCA2	-384,2
chr15:35523576-35524636	chr15	+	35524042	35524478	True	NR_003144,NR_037507	chr15,chr15	+,-	LOC723972,MIR3942	5048,140145
chr1:36549979-36550216	chr1	+	36550003	36550243	True	NM_017825,NM_005202,NM_014466	chr1,chr1,chr1	+,-,+	ADPRHL2,COL8A2,TEKT2	4209,15657,-378
chr2:128857175-128857750	chr2	+	128857178	128857516	True	NM_024545,NM_020120,NR_027671	chr2,chr2,chr2	-,+,+	SAP130,UGGT1,UGGT1	-72309,-8475,-8447
chr1:55014813-55015137	chr1	+	55014863	55015101	True	NM_015547,NM_147161,NM_176782	chr1,chr1,chr1	+,+,-	ACOT11,ACOT11,FAM151A	-1107,-1107,74149
chr2:178256729-178257264	chr2	+	178256729	178257307	True	NM_003659,NR_026966	chr2,chr2	+,-	AGPS,LOC100130691	163,162
chr19:19052493-19052892	chr19	+	19052558	19052914	True	NM_004838,NR_027297,NM_001145722,NM_001145721,NR_033677,NM_001145724	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,+,-	HOMER3,HOMER3,HOMER3,HOMER3,DDX49,HOMER3	-517,-2114,-1445,-1397,-22125,-2700
chr5:171432873-171433213	chr5	+	171432877	171433219	True	NM_012300,NM_001171183,NM_033645,NM_033644	chr5,chr5,chr5,chr5	-,+,-,-	FBXW11,EFCAB9,FBXW11,FBXW11	708,187956,708,708
chr1:1258625-1259773	chr1	+	1258664	1259212	True	NM_017871,NM_152228,NM_001029885	chr1,chr1,chr1	-,+,+	CPSF3L,TAS1R3,GLTPD1	884,7513,930
chr5:175873915-175874163	chr5	+	175873917	175874124	True	NM_014613,NM_007097	chr5,chr5	+,-	FAF2,CLTB	1231,-30377
chrX:40130470-40131065	chrX	+	40130498	40131056	True	NM_001123384,NM_005765	chrX,chrX	-,+	BCOR,ATP6AP2	-93916,309159
chr21:43187006-43187317	chr21	+	43187013	43187285	True	NR_024028,NM_020639	chr21,chr21	+,-	NCRNA00112,RIPK4	-50468,14
chr7:6047536-6048495	chr7	+	6047767	6048410	True	NM_006303,NR_003085,NM_000535	chr7,chr7,chr7	+,-,-	AIMP2,PMS2,PMS2	471,377,377
chr11:124736624-124737828	chr11	+	124736886	124737870	True	NM_022370,NM_019055	chr11,chr11	+,-	ROBO3,ROBO4	-1632,30011
chr3:44463005-44463436	chr3	+	44463044	44463320	True	NM_173826,NM_181489	chr3,chr3	+,-	C3orf23,ZNF445	-83151,55892
chr17:7338416-7338696	chr17	+	7338513	7338713	True	NM_152766,NM_000747,NM_178518,NM_175734,NM_004112	chr17,chr17,chr17,chr17,chr17	-,+,+,+,+	C17orf61,CHRNB1,TMEM102,C17orf74,FGF11	-31063,9692,48,-9630,3975
chr3:193093786-193094528	chr3	+	193093861	193094577	True	NR_026877,NM_198505	chr3,chr3	+,-	MGC2889,ATP13A5	-134345,1988
chr7:15726539-15726807	chr7	+	15726644	15726790	True	NM_001195280,NM_005924	chr7,chr7	+,-	LOC100506049,MEOX2	839714,-336
chr18:32182939-32184137	chr18	+	32183585	32184161	True	NM_001198940,NM_003787	chr18,chr18	+,-	DTNA,NOL4	-10367,-380070
chr1:231762043-231762337	chr1	+	231762044	231762344	True	NM_001164537,NM_018662,NM_001164538,NM_001164539,NM_001012957,NM_001012958,NM_001012959,NR_034037,NM_001164549,NM_001164548,NM_001164542,NM_001164541,NM_001164540,NM_001164547,NM_001164546,NM_001164545,NM_001164544,NM_001164550,NM_001164551,NM_001164552,NM_001164553,NM_001164554,NM_001164555,NM_001164556	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,+,+,-,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+	DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,LOC100287814,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1	216,216,216,216,216,216,216,-14208,216,216,216,216,216,216,216,216,216,216,216,216,216,216,216,216
chr9:21211648-21213572	chr9	+	21211672	21213548	True	NM_002171,NM_002170,NM_002173,NM_021057	chr9,chr9,chr9,chr9	-,+,-,-	IFNA10,IFNA8,IFNA16,IFNA7	-4530,195597,3812,-9468
chr7:116593549-116593759	chr7	+	116593639	116593749	True	NR_002329,NR_002330,NM_021908,NM_018412	chr7,chr7,chr7,chr7	+,-,+,+	ST7OT4,ST7OT1,ST7,ST7	203,689,-309,-309
chr5:135166465-135166851	chr5	+	135166470	135166866	True	NM_145282,NM_000590	chr5,chr5	+,-	SLC25A48,IL9	3498,64700
chr7:130793229-130794590	chr7	+	130793286	130794467	True	NR_015431,NM_001145354,NR_024153	chr7,chr7,chr7	-,+,-	FLJ43663,MKLN1,FLJ43663	92,387,-1497
chr20:274871-275599	chr20	+	275098	275543	True	NM_033089,NM_153269	chr20,chr20	+,-	ZCCHC3,C20orf96	2660,-3708
chr4:149363633-149363906	chr4	+	149363662	149363878	True	NM_001166104,NM_000901,NM_024605	chr4,chr4,chr4	-,-,+	NR3C2,NR3C2,ARHGAP10	4,4,-710260
chr1:60281045-60281350	chr1	+	60281064	60281398	True	NM_000775,NM_015888	chr1,chr1	-,+	CYP2J2,HOOK1	111075,-582
chr8:11229636-11231296	chr8	+	11229773	11231235	True	NR_026814,NM_053279	chr8,chr8	+,-	C8orf12,FAM167A	-3915,93103
chr6:170101720-170102192	chr6	+	170101751	170102231	True	NM_182552,NM_001202550,NM_001029863	chr6,chr6,chr6	-,-,+	WDR27,WDR27,C6orf120	-16,-16,25
chr2:98281244-98282430	chr2	+	98281435	98282097	True	NM_001862,NM_005735	chr2,chr2	+,-	COX5B,ACTR1B	-18966,-874
chr11:73019243-73019483	chr11	+	73019290	73019526	True	NM_014824,NM_014786	chr11,chr11	-,+	FCHSD2,ARHGEF17	-166147,136
chr12:122241149-122241388	chr12	+	122241279	122241375	True	NM_015048,NM_019034,NR_002809	chr12,chr12,chr12	+,-,-	SETD1B,RHOF,LOC338799	1262,-9685,65
chr7:64362250-64363003	chr7	+	64362640	64362733	True	NR_002789,NR_003099,NM_021148	chr7,chr7,chr7	-,+,+	LOC168474,ZNF273,ZNF273	-48462,886,886
chr10:26875333-26877136	chr10	+	26875605	26877153	True	NM_001012750,NR_026793	chr10,chr10	-,+	ABI1,NCRNA00264	272913,1640
chr1:115397497-115398049	chr1	+	115397563	115397929	True	NM_003176,NM_025073	chr1,chr1	+,-	SYCP1,SIKE1	-159,-74255
chr16:2732841-2733098	chr16	+	2732847	2733043	True	NM_031948,NM_018992	chr16,chr16	-,+	PRSS27,KCTD5	37559,-403
chr5:63462103-63462306	chr5	+	63462223	63462353	True	NM_000524,NM_178532,NM_001113561	chr5,chr5,chr5	-,+,+	HTR1A,RNF180,RNF180	-204677,-603,-603
chr1:22301617-22302523	chr1	+	22301889	22302302	True	NM_005529,NM_007352	chr1,chr1	-,+	HSPG2,CELA3B	-38139,1115
chr1:22301617-22302523	chr1	+	22326814	22327227	False	NM_005529,NM_005747	chr1,chr1	-,+	HSPG2,CELA3A	-63064,921
chr9:127021695-127022973	chr9	+	127021706	127022577	True	NM_002799,NM_014397,NM_001145001,NM_001166168,NM_001166167	chr9,chr9,chr9,chr9,chr9	-,+,+,+,+	PSMB7,NEK6,NEK6,NEK6,NEK6	155201,-1561,-1561,-1227,-1872
chr19:44116794-44117226	chr19	+	44116810	44117240	True	NM_001145641,NM_182498	chr19,chr19	+,-	SRRM5,ZNF428	-608,6824
chr10:30723851-30724058	chr10	+	30723856	30724107	True	NR_003524,NM_005204	chr10,chr10	-,+	LOC729668,MAP3K8	-60479,-1041
chr10:75195414-75196468	chr10	+	75195727	75196502	True	NM_001024593,NM_173348	chr10,chr10	-,+	ZMYND17,FAM149B1	-2408,-267909
chr19:58039957-58041145	chr19	+	58039962	58040980	True	NM_001199295,NM_001039654,NM_153263	chr19,chr19,chr19	+,-,+	ZNF549,ZNF550,ZNF549	-1323,26795,-1323
chr11:62436003-62436489	chr11	+	62436310	62436390	True	NR_004390,NM_001043229,NM_001085372,NM_024099	chr11,chr11,chr11,chr11	+,+,+,-	SNORA57,METTL12,C11orf83,C11orf48	-3473,-3588,2735,2905
chr12:53126624-53127611	chr12	+	53126718	53127592	True	NM_199187,NM_175078	chr12,chr12	+,-	KRT18,KRT77	215062,-29471
chr7:99699967-99701363	chr7	+	99700162	99701385	True	NM_005916,NR_029831,NR_029498,NM_182776,NR_029510,NM_004722	chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,+	MCM7,MIR106B,MIR25,MCM7,MIR93,AP4M1	-735,-8465,-8896,-1782,-8692,-1084
chr4:121265412-121267105	chr4	+	121265432	121266605	True	NM_002358,NR_037630	chr4,chr4	-,+	MAD2L1,LOC645513	-277419,-889552
chr4:41982990-41983714	chr4	+	41983574	41983748	True	NM_006345,NM_001159547,NM_001029955	chr4,chr4,chr4	+,-,+	SLC30A9,BEND4,DCAF4L1	8774,171197,5
chr8:145642730-145643081	chr8	+	145643024	145643094	True	NM_130849,NM_017767,NM_174922,NM_013291	chr8,chr8,chr8,chr8	-,-,+,-	SLC39A4,SLC39A4,ADCK5,CPSF1	-751,-1107,-45344,-8291
chr1:208084793-208085428	chr1	+	208084892	208085423	True	NM_001773,NM_001025109,NR_026817	chr1,chr1,chr1	-,-,+	CD34,CD34,LOC148696	-209,-209,-93228
chr1:20463872-20464328	chr1	+	20463903	20464373	True	NM_022819,NM_012400	chr1,chr1	+,-	PLA2G2F,PLA2G2D	1449,-17895
chr19:52693820-52694052	chr19	+	52693897	52693967	True	NM_001102657,NR_033500,NM_014225	chr19,chr19,chr19	-,+,+	ZNF836,PPP2R1A,PPP2R1A	-19001,-893,-893
chr1:166813187-166814044	chr1	+	166813340	166813998	True	NM_017542,NM_053053	chr1,chr1	+,-	POGK,TADA1	-4667,31707
chrY:13311530-13311772	chrY	+	13311641	13311705	True	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	1462592,1221734
chr7:100451920-100453456	chr7	+	100451956	100453294	True	NM_020246,NM_004444	chr7,chr7	+,-	SLC12A9,EPHB4	-1649,-26813
chr11:72353841-72354107	chr11	+	72353945	72354067	True	NM_033388,NR_026572,NM_001143839	chr11,chr11,chr11	+,-,-	ATG16L2,PDE2A,PDE2A	171383,-458,-441
chr11:104825009-104826090	chr11	+	104825011	104826115	True	NM_001077244,NM_033306	chr11,chr11	+,-	GRIA4,CASP4	654684,1369
chr14:102096738-102096953	chr14	+	102096740	102096958	True	NR_031649,NM_001362	chr14,chr14	-,+	MIR1247,DIO3	-69981,-69103
chr10:125808516-125808989	chr10	+	125808547	125809031	True	NM_015892,NM_001167880	chr10,chr10	-,+	CHST15,LHPP	42949,341309
chr1:112061651-112062654	chr1	+	112061927	112062699	True	NM_174896,NM_000677	chr1,chr1	+,-	C1orf162,ADORA3	-45374,-15184
chr14:96830610-96831886	chr14	+	96830675	96831884	True	NM_018036,NM_016472	chr14,chr14	-,+	ATG2B,C14orf129	-997,14137
chr12:120702062-120703225	chr12	+	120702067	120703091	True	NM_001080855,NM_002859,NM_012240	chr12,chr12,chr12	-,-,+	PXN,PXN,SIRT4	522,522,37032
chr15:71407392-71407668	chr15	+	71407459	71407633	True	NM_024817,NM_001102658	chr15,chr15	+,-	THSD4,CT62	26154,256
chr11:17195508-17195854	chr11	+	17195674	17195826	True	NM_002645,NM_005013	chr11,chr11	-,+	PIK3C2A,NUCB2	-4320,102459
chr10:72163074-72163854	chr10	+	72163087	72163715	True	NM_018239,NM_004096	chr10,chr10	-,+	LRRC20,EIF4EBP2	-20705,145
chr2:154729441-154729824	chr2	+	154729483	154729869	True	NM_019845,NM_052917	chr2,chr2	-,+	RPRM,GALNT13	-394161,-1114
chr1:20962264-20962993	chr1	+	20962626	20962848	True	NM_005216,NM_032409	chr1,chr1	-,+	DDOST,PINK1	25243,-2739
chr7:66309896-66310195	chr7	+	66309998	66310216	True	NR_003934,NM_017994	chr7,chr7	-,+	LOC729156,C7orf42	-185,75986
chr7:140803061-140804232	chr7	+	140803144	140804265	True	NM_053035,NM_001195278	chr7,chr7	-,+	MRPS33,LOC100131199	-88363,-29170
chr11:118213412-118214008	chr11	+	118213438	118214026	True	NM_000073,NM_001040651,NM_000732	chr11,chr11,chr11	+,-,-	CD3G,CD3D,CD3D	1032,21,21
chr12:54719154-54719693	chr12	+	54719166	54719454	True	NM_016057,NM_001136023	chr12,chr12	+,-	COPZ1,NFE2	-306,-24375
chr6:50786790-50787438	chr6	+	50786820	50787396	True	NM_001037498,NM_003221	chr6,chr6	-,+	DEFB112,TFAP2B	-770456,-432
chr12:8333643-8335556	chr12	+	8333647	8335205	True	NM_001004328,NR_026788,NM_018088,NR_036440	chr12,chr12,chr12,chr12	+,+,-,-	ZNF705A,FAM66C,FAM90A1,POU5F1P3	-8548,-893,45059,-46199
chr19:40193572-40195472	chr19	+	40193784	40195316	True	NM_020129,NM_203471,NM_001828	chr19,chr19,chr19	+,+,-	LGALS14,LGALS14,CLC	-155,-155,33403
chr1:16769389-16770165	chr1	+	16769414	16770068	True	NM_018090,NM_198546,NM_001145277,NM_001145278	chr1,chr1,chr1,chr1	+,-,+,+	NECAP2,SPATA21,NECAP2,NECAP2	-2300,-5495,-2300,-2300
chr3:10066728-10067897	chr3	+	10066997	10067823	True	NM_001018115,NR_002786,NM_033084	chr3,chr3,chr3	+,-,+	FANCD2,CIDECP,FANCD2	289,47,289
chr7:100062159-100063553	chr7	+	100063440	100063515	True	NM_001004323,NM_173564	chr7,chr7	-,+	C7orf61,C7orf51	-1546,18034
chr17:7607284-7607750	chr17	+	7607303	7607713	True	NM_001126114,NM_001406	chr17,chr17	-,+	TP53,EFNB3	-16440,806
chr20:30166780-30167984	chr20	+	30167043	30167759	True	NM_001037500,NM_002165	chr20,chr20	-,+	DEFB124,ID1	-106227,25332
chr3:196753554-196754462	chr3	+	196753559	196754439	True	NR_024388,NM_005929,NM_033316	chr3,chr3,chr3	+,-,-	LOC152217,MFI2,MFI2	-84116,2298,2297
chr16:608359-608723	chr16	+	608382	608724	True	NM_176677,NM_145270,NR_024121	chr16,chr16,chr16	+,+,-	NHLRC4,C16orf11,NCRNA00235	8307,1697,-30975
chrX:135249522-135249937	chrX	+	135249684	135249989	True	NM_001159704,NM_001173517,NM_001167819	chrX,chrX,chrX	+,-,+	FHL1,MAP7D3,FHL1	1465,83802,1806
chr3:170073302-170074033	chr3	+	170073301	170074051	True	NM_001145098,NM_001145097,NM_024947,NM_005414	chr3,chr3,chr3,chr3	+,+,-,+	SKIL,SKIL,PHC3,SKIL	1421,3359,-173764,1421
chr19:45908030-45908260	chr19	+	45908042	45908148	True	NM_012099,NM_006663,NM_001142502	chr19,chr19,chr19	+,-,-	CD3EAP,PPP1R13L,PPP1R13L	1318,214,1509
chr7:116165761-116166104	chr7	+	116165760	116166096	True	NR_002330,NM_001753,NM_001172896,NM_001172897,NM_001172895	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	ST7OT1,CAV1,CAV1,CAV1,CAV1	428342,-972,250,315,-748
chr15:24797441-24798867	chr15	+	24797997	24798899	True	NR_026646,NR_026647	chr15,chr15	+,-	PWRN1,PWRN2	4404,-382944
chr6:168377721-168378006	chr6	+	168377811	168377875	True	NM_005355,NM_001129895	chr6,chr6	+,-	KIF25,HGC6.3	40677,-192
chr12:105725045-105725259	chr12	+	105725092	105725292	True	NM_018171,NM_001145199	chr12,chr12	-,+	APPL2,C12orf75	-95084,-729
chr12:131003961-131005139	chr12	+	131004072	131004950	True	NM_004764,NM_015347	chr12,chr12	+,-	PIWIL1,RIMBP2	-181690,-1662
chr3:47421154-47421855	chr3	+	47421174	47421796	True	NM_012235,NM_015466	chr3,chr3	-,+	SCAP,PTPN23	95699,694
chr20:62614374-62614579	chr20	+	62614404	62614592	True	NM_080621,NM_012469	chr20,chr20	-,+	SAMD10,PRPF6	-3409,-2024
chr1:171711164-171711393	chr1	+	171711250	171711428	True	NM_001007239,NM_003762,NR_033704,NM_001185127	chr1,chr1,chr1,chr1	+,-,-,-	METTL13,VAMP4,VAMP4,VAMP4	39332,1,1,1
chr7:74490327-74491122	chr7	+	74490670	74490739	True	NM_030798,NM_001003795	chr7,chr7	-,+	WBSCR16,GTF2IRD2B	-971,17607
chr7:74490327-74491122	chr7	-	74285281	74285359	False	NM_173537,NR_027775	chr7,chr7	-,+	GTF2IRD2,PMS2P5	-17440,21534
chr14:39646664-39647047	chr14	+	39646782	39647087	True	NM_001079537,NM_177452,NM_002687	chr14,chr14,chr14	-,-,+	TRAPPC6B,TRAPPC6B,PNN	-7148,-7148,-2446
chr11:65336024-65336923	chr11	+	65336215	65336963	True	NM_001099409,NM_006396,NM_152832,NM_021070,NM_001098785,NM_001098784	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,-,+,+	EHBP1L1,SSSCA1,FAM89B,LTBP3,FAM89B,FAM89B	6545,979,2856,-10516,2856,2856
chr8:41504141-41504564	chr8	+	41504184	41504564	True	NM_152568,NM_178819	chr8,chr8	-,+	NKX6-3,AGPAT6	364,-68528
chr1:151171059-151171316	chr1	+	151171142	151171338	True	NM_001135637,NM_001135636,NM_003557,NM_005997,NM_001135638	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	PIP5K1A,PIP5K1A,PIP5K1A,VPS72,PIP5K1A	-172,-172,-172,-8502,-172
chr5:305111-305662	chr5	+	305233	305641	True	NM_020731,NM_145265	chr5,chr5	+,-	AHRR,CCDC127	-993,-86936
chr22:25359185-25359627	chr22	+	25359389	25359633	True	NM_001145206,NM_001001663	chr22,chr22	+,-	KIAA1671,TMEM211	64307,-24075
chr3:16220032-16221422	chr3	+	16220097	16221465	True	NM_001047434,NM_054110	chr3,chr3	-,+	DPH3,GALNTL2	85081,-3964
chr10:62534611-62535289	chr10	+	62534771	62535342	True	NM_033379,NM_001170407,NM_001170406,NM_001204403,NM_001786	chr10,chr10,chr10,chr10,chr10	+,+,+,-,+	CDK1,CDK1,CDK1,ANK3,CDK1	2869,2869,2746,-41487,2869
chrX:41190446-41192004	chrX	+	41190528	41191823	True	NM_001193417,NM_001193416,NM_001356,NR_027761	chrX,chrX,chrX,chrX	+,+,+,-	DDX3X,DDX3X,DDX3X,LOC100132831	827,827,827,-498079
chr4:71459301-71460945	chr4	+	71459658	71460891	True	NM_144646,NM_016519	chr4,chr4	-,+	IGJ,AMBN	71514,-1720
chr2:33952596-33953048	chr2	+	33952599	33953059	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-213708,275
chr2:71060825-71061143	chr2	+	71060907	71061146	True	NM_015717,NM_012476	chr2,chr2	-,+	CD207,VAX2	1858,66573
chr2:242577514-242578383	chr2	+	242577598	242578291	True	NM_015963,NM_013325,NM_178326	chr2,chr2,chr2	-,+,+	THAP4,ATG4B,ATG4B	-873,-628,-628
chr6:71385276-71385813	chr6	+	71385428	71385834	True	NM_080742,NM_001044305,NM_021940	chr6,chr6,chr6	-,+,+	B3GAT2,SMAP1,SMAP1	281004,-8008,-8008
chr11:829823-830096	chr11	+	829836	830090	True	NM_001039490,NM_021128,NM_173584,NM_139030,NM_004357,NM_139029	chr11,chr11,chr11,chr11,chr11,chr11	+,-,+,+,+,+	CD151,POLR2L,EFCAB4A,CD151,CD151,CD151	2861,12489,-2302,2861,2861,2861
chr2:189152999-189153744	chr2	+	189152998	189153563	True	NR_030287,NM_052952,NM_016315	chr2,chr2,chr2	+,-,+	MIR561,DIRC1,GULP1	8655,501321,3826
chr22:35875854-35876167	chr22	+	35875915	35876181	True	NM_005368,NM_014310	chr22,chr22	-,+	MB,RASD2	137253,61170
chr2:232374706-232375672	chr2	+	232374879	232375491	True	NR_024079,NM_152614	chr2,chr2	-,+	C2orf52,C2orf57	3615,82083
chr22:42074272-42075132	chr22	+	42074273	42074959	True	NM_005008,NM_001142964	chr22,chr22	-,+	NHP2L1,C22orf46	3655,11587
chr8:23105297-23105996	chr8	+	23105304	23106020	True	NM_152272,NM_003844	chr8,chr8	+,-	CHMP7,TNFRSF10A	-4212,-22624
chr8:101167008-101167945	chr8	+	101167264	101167680	True	NM_172218,NM_001029860,NM_003114,NM_005034,NR_036491	chr8,chr8,chr8,chr8,chr8	+,-,+,+,-	SPAG1,FBXO43,SPAG1,POLR2K,FBXO43	2582,-9165,2882,-4483,-9165
chr3:71773838-71774121	chr3	+	71773880	71774076	True	NM_001134650,NM_001134651,NM_018971	chr3,chr3,chr3	-,-,+	EIF4E3,EIF4E3,GPR27	4243,500,29124
chr1:248549400-248549939	chr1	+	248549446	248549988	True	NM_001005471,NM_001004691	chr1,chr1	+,-	OR2T6,OR2M7	921,-61576
chr19:1400993-1401196	chr19	+	1400997	1401131	True	NM_138924,NM_018959,NM_170711,NM_000156	chr19,chr19,chr19,chr19	-,+,+,-	GAMT,DAZAP1,DAZAP1,GAMT	471,6452,6452,471
chr17:80380855-80381189	chr17	+	80380944	80381206	True	NM_173620,NM_175902,NR_033265,NM_024648	chr17,chr17,chr17,chr17	+,-,-,-	HEXDC,C17orf101,C17orf101,C17orf101	-4751,-4431,-4431,-4431
chr3:122382055-122383654	chr3	+	122382342	122383230	True	NM_031458,NM_017554	chr3,chr3	-,+	PARP9,PARP14	-98819,16441
chr12:89746435-89747085	chr12	+	89746572	89747086	True	NR_028138,NM_022652,NM_001946	chr12,chr12,chr12	+,-,-	LOC338758,DUSP6,DUSP6	355645,-276,-276
chrX:101139564-101140110	chrX	+	101139563	101140147	True	NM_080390,NR_036431	chrX,chrX	+,-	TCEAL2,ZMAT1	240512,5096
chr19:53874083-53875506	chr19	+	53874212	53875514	True	NM_033341,NR_003699	chr19,chr19	-,+	BIRC8,ZNF525	-79337,-5296
chr16:66881127-66882470	chr16	+	66881182	66882295	True	NM_001014435,NM_005182,NM_003905	chr16,chr16,chr16	+,+,-	CA7,CA7,NAE1	-2392,-2951,-16303
chr1:77359504-77360834	chr1	+	77359758	77360426	True	NM_005482,NM_030965	chr1,chr1	-,+	PIGK,ST6GALNAC5	324757,-26632
chr3:169382196-169383638	chr3	+	169382210	169383425	True	NM_001205194,NM_004991,NM_001185118	chr3,chr3,chr3	-,-,+	MECOM,MECOM,MYNN	-647,-647,107427
chr6:28227163-28228053	chr6	+	28227167	28228091	True	NM_152736,NM_001111039,NM_001007531,NM_001023560,NM_019110	chr6,chr6,chr6,chr6,chr6	+,+,+,+,-	ZNF187,ZNF187,NKAPL,ZNF187,ZKSCAN4	6696,6696,-120,6696,-7165
chr5:135529364-135530113	chr5	+	135529371	135530157	True	NR_024418,NM_001001419	chr5,chr5	-,+	LOC389332,SMAD5	-520,-60886
chr3:129324608-129324838	chr3	+	129324655	129324871	True	NM_153833,NM_015103	chr3,chr3	+,-	H1FOO,PLXND1	-62649,761
chr4:75857961-75858170	chr4	+	75857961	75858167	True	NM_001729,NM_015393	chr4,chr4	-,+	BTC,PARM1	-138079,117
chr2:149260060-149261206	chr2	+	149260179	149261239	True	NM_181742,NM_015630	chr2,chr2	-,+	ORC4,EPC2	-481006,141320
chr19:5849419-5850435	chr19	+	5849488	5850243	True	NM_001040701,NM_000150,NM_001097641,NM_001097640,NM_000149,NM_001097639,NM_004558	chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,+	FUT6,FUT6,FUT3,FUT3,FUT3,FUT3,NRTN	-9746,-9746,1292,1292,1292,1292,-25722
chr3:125491052-125492030	chr3	+	125491296	125491380	True	NR_024250,NR_031687	chr3,chr3	+,-	LOC100125556,MIR548I1	144063,18065
chrY:14483540-14484562	chrY	+	14483585	14484247	True	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	290050,49192
chr8:87881113-87881601	chr8	+	87881115	87881585	True	NM_019098,NM_173538	chr8,chr8	-,+	CNGB3,CNBD1	-125212,-2490
chrX:135067628-135067861	chrX	+	135067797	135067891	True	NM_173470,NM_006359,NM_001177651,NM_001042537	chrX,chrX,chrX,chrX	-,+,+,+	MMGT1,SLC9A6,SLC9A6,SLC9A6	-11663,-262,-265,-262
chr3:48669094-48669722	chr3	+	48669347	48669767	True	NM_001040454,NM_134263,NM_033629,NM_022911,NM_134426	chr3,chr3,chr3,chr3,chr3	-,-,+,-,-	SLC26A6,SLC26A6,TREX1,SLC26A6,SLC26A6	1562,3209,-162169,3209,3209
chr1:113047459-113048411	chr1	+	113047669	113048389	True	NR_036210,NM_024494	chr1,chr1	-,+	MIR4256,WNT2B	-43214,2980
chr4:89301791-89303001	chr4	+	89301919	89302693	True	NM_017912,NM_001165136,NM_152542	chr4,chr4,chr4	+,+,-	HERC6,HERC6,PPM1K	-2087,-2087,-96031
chr4:15485343-15486600	chr4	+	15485491	15486641	True	NM_001193534,NM_001080522	chr4,chr4	-,+	FBXL5,CC2D2A	170444,-14053
chr10:74856001-74856210	chr10	+	74856005	74856119	True	NM_001142595,NM_001017962,NM_001142596,NM_000917,NM_015901	chr10,chr10,chr10,chr10,chr10	-,-,-,-,+	P4HA1,P4HA1,P4HA1,P4HA1,NUDT13	663,663,663,663,14090
chr19:10230601-10230985	chr19	+	10230644	10230783	True	NM_002566,NM_003755	chr19,chr19	+,-	P2RY11,EIF3G	-8498,-45
chr17:15373786-15375051	chr17	+	15373840	15374845	True	NM_001204477,NM_001130842	chr17,chr17	-,+	CDRT4,ZNF286A	-2915,228045
chr8:142137568-142137858	chr8	+	142137587	142137891	True	NM_001080431,NM_014957	chr8,chr8	-,+	SLC45A4,DENND3	100832,828
chr1:155177741-155178412	chr1	+	155177796	155178428	True	NM_002455,NM_198883,NM_007112	chr1,chr1,chr1	+,+,-	MTX1,MTX1,THBS3	61,61,-106
chr1:48415170-48415812	chr1	+	48415371	48415663	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	46951,272693
chr7:135433734-135434476	chr7	+	135433825	135434485	True	NM_205855,NM_001130929	chr7,chr7	-,+	FAM180A,PL-5283	-231,-86655
chr3:126275062-126276263	chr3	+	126275447	126276301	True	NM_152533,NM_152889	chr3,chr3	-,+	C3orf22,CHST13	1507,-32322
chr17:4986090-4986572	chr17	+	4986132	4986576	True	NM_014519,NM_153018	chr17,chr17	-,+	ZNF232,ZFP3	39871,-4438
chr17:27716204-27716418	chr17	+	27716203	27716288	True	NM_025142,NM_020791,NM_020772	chr17,chr17,chr17	+,+,-	TAOK1,TAOK1,NUFIP2	1654,1654,-95037
chr7:1595600-1595997	chr7	+	1595613	1596033	True	NR_021487,NM_001097620	chr7,chr7	+,-	KIAA1908,TMEM184A	13675,83
chr9:140322599-140322960	chr9	+	140322680	140322788	True	NM_006647,NM_017820	chr9,chr9	+,-	NOXA1,EXD3	-4884,-4966
chrX:119078364-119079126	chrX	+	119078845	119078936	True	NM_024528,NM_178813	chrX,chrX	-,+	NKAP,AKAP14	-1110,-48970
chr3:17782531-17783000	chr3	+	17782613	17783043	True	NM_014744,NM_001134380,NR_037465	chr3,chr3,chr3	-,-,+	TBC1D5,TBC1D5,MIR3714	-214,1247,-807989
chr7:6535903-6536606	chr7	+	6536094	6536591	True	NM_006854,NM_001134387	chr7,chr7	-,+	KDELR2,ZDHHC4	-12245,80473
chr9:140031626-140032006	chr9	+	140031694	140031824	True	NM_000832,NM_013379,NM_007327,NM_021569,NM_001185090,NM_001185091	chr9,chr9,chr9,chr9,chr9,chr9	+,-,+,+,+,+	GRIN1,DPP7,GRIN1,GRIN1,GRIN1,GRIN1	1784,-22499,1784,1784,1784,1784
chr1:70273551-70274988	chr1	+	70273560	70274019	True	NM_020794,NM_017768	chr1,chr1	+,-	LRRC7,LRRC40	-47753,397401
chr2:172378392-172378844	chr2	+	172378487	172378779	True	NM_024843,NM_001127383,NM_024770	chr2,chr2,chr2	+,+,-	CYBRD1,CYBRD1,METTL8	86,86,-87175
chr7:48211146-48212112	chr7	+	48211167	48212012	True	NM_152701,NM_152782	chr7,chr7	+,-	ABCA13,SUN3	-161,-142451
chr17:1534677-1535918	chr17	+	1535113	1535684	True	NM_001163673,NM_152346	chr17,chr17	+,-	WDR81,SLC43A2	84132,-2983
chr12:26276003-26277923	chr12	+	26276038	26277659	True	NM_001135823,NM_001164746,NM_030762	chr12,chr12,chr12	+,+,-	SSPN,RASSF8,BHLHE41	70609,-70598,394
chr14:96000998-96001209	chr14	+	96001099	96001205	True	NM_016417,NR_003002,NR_003138,NR_001459	chr14,chr14,chr14,chr14	+,-,-,-	GLRX5,SCARNA13,SNHG10,SNHG10	117,-1133,54,54
chr17:73086963-73087261	chr17	+	73087029	73087307	True	NM_014595,NM_004695	chr17,chr17	-,+	NT5C,SLC16A5	40620,-3025
chr7:72502902-72503384	chr7	+	72503000	72503220	True	NR_003614,NR_003664	chr7,chr7	+,-	PMS2L2,SPDYE8P	-26378,-2691
chr7:72502902-72503384	chr7	-	99900835	99900979	False	NM_001004351,NR_028038	chr7,chr7	+,-	SPDYE3,GATS	4345,-30980
chr7:72502902-72503384	chr7	+	76664316	76664536	False	NM_006682,NR_028058	chr7,chr7	-,+	FGL2,LOC100132832	164664,4260
chr7:72502902-72503384	chr7	-	74933621	74933841	False	NR_003614,NR_003664	chr7,chr7	-,+	PMS2L2,SPDYE8P	54431,2691
chr7:72502902-72503384	chr7	-	74961646	74961866	False	NR_003614,NR_003664	chr7,chr7	-,+	PMS2L2,SPDYE8P	26406,2693
chr10:21183124-21183563	chr10	+	21183481	21183571	True	NM_006393,NM_001195627	chr10,chr10	-,+	NEBL,MLLT10	3018,639529
chrX:47486205-47486556	chrX	+	47486245	47486501	True	NM_001145252,NM_133499,NM_006950,NM_002621,NR_028119	chrX,chrX,chrX,chrX,chrX	-,-,-,-,+	CFP,SYN1,SYN1,CFP,LOC100133957	2918,-6989,-6989,3253,31730
chr2:213401064-213401702	chr2	+	213401075	213401703	True	NM_001042599,NM_005235,NM_001025436	chr2,chr2,chr2	-,-,+	ERBB4,ERBB4,SPAG16	1699,1699,747412
chrX:71792162-71792562	chrX	+	71792286	71792581	True	NM_018486,NM_001080851,NM_001166448,NM_001166419,NM_001166418,NM_001166422,NM_001166420	chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,+,-,-,-,-,-	HDAC8,DMRTC1B,HDAC8,HDAC8,HDAC8,HDAC8,HDAC8	422,272294,422,422,422,422,422
chr20:6194158-6195178	chr20	+	6194187	6195180	True	NM_001127458,NM_017671	chr20,chr20	+,-	CRLS1,FERMT1	-206340,-89996
chr9:19029689-19030117	chr9	+	19029819	19030139	True	NM_153707,NM_006570	chr9,chr9	-,+	FAM154A,RRAGA	3167,19232
chr1:110526761-110527035	chr1	+	110526806	110526936	True	NM_006621,NM_006492	chr1,chr1	+,-	AHCYL1,ALX3	371,86436
chr12:49661161-49662389	chr12	+	49661433	49662431	True	NM_001008223,NM_032704	chr12,chr12	-,+	C1QL4,TUBA1C	68590,-2627
chr19:49989614-49990126	chr19	+	49989673	49990115	True	NR_026712,NR_000020,NR_000021,NM_012423,NR_000019,NR_000018,NM_001015,NR_029703	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,+,+,-	RPL13AP5,SNORD33,SNORD32A,RPL13A,SNORD34,SNORD35A,RPS11,MIR150	749,3758,3107,749,4048,4316,9518,14060
chr19:51522341-51522800	chr19	+	51522529	51522591	True	NM_012315,NM_002776,NM_001136032,NM_145888,NM_001077500,NM_001167605,NM_006853,NM_144947,NM_014441	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,-,+	KLK9,KLK10,KLK11,KLK10,KLK10,KLK11,KLK11,KLK11,SIGLEC9	-9639,741,7331,413,890,8749,8749,8344,105545
chr16:29628975-29629487	chr16	+	29629173	29629260	True	NR_002593,NM_001030288	chr16,chr16	-,+	SLC7A5P1,SPN	-4135,45039
chr16:29628975-29629487	chr16	+	21543763	21544157	False	NM_001077180,NR_002594	chr16,chr16	+,-	METTL9,SLC7A5P2	66698,-11998
chrX:48767436-48768242	chrX	+	48767500	48768278	True	NM_005660,NM_006875,NM_001167992,NM_001032289,NM_001042498	chrX,chrX,chrX,chrX,chrX	-,-,+,-,-	SLC35A2,PIM2,PQBP1,SLC35A2,SLC35A2	689,8185,-11776,705,1007
chr12:15505899-15506813	chr12	+	15505964	15506855	True	NM_032918,NM_030667	chr12,chr12	-,+	RERG,PTPRO	-131553,-30528
chr8:70401135-70402072	chr8	+	70401164	70401615	True	NM_001128205,NM_001128206,NM_001146009	chr8,chr8,chr8	+,+,-	SULF1,SULF1,SLCO5A1	3412,3412,343846
chr11:33060551-33061105	chr11	+	33060659	33061093	True	NM_018393,NM_001145541,NM_001326	chr11,chr11,chr11	+,+,-	TCP11L1,TCP11L1,CSTF3	43,467,121994
chr15:41853113-41853344	chr15	+	41853211	41853313	True	NM_015540,NM_006293	chr15,chr15	-,+	RPAP1,TYRO3	-16747,-2042
chr1:16539242-16539811	chr1	+	16539288	16539826	True	NM_153213,NM_001114600	chr1,chr1	-,+	ARHGEF19,C1orf144	-184,153756
chr14:31028724-31028960	chr14	+	31028771	31028995	True	NM_017769,NR_030354	chr14,chr14	+,-	G2E3,MIR624	-495,455003
chr12:6864247-6865531	chr12	+	6864412	6865502	True	NM_005439,NR_026581,NM_002824	chr12,chr12,chr12	-,-,+	MLF2,MLF2,PTMS	-2330,-1776,10038
chr1:178699927-178701592	chr1	+	178700298	178701415	True	NM_152663,NM_004673	chr1,chr1	+,-	RALGPS2,ANGPTL1	-6051,138851
chr17:61988295-61989351	chr17	+	61988402	61989132	True	NM_001318,NM_022579,NM_022581,NM_000515,NM_022560,NM_022580,NM_022562,NM_022561,NR_002947,NM_022559	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,-,-,-,+,-	CSHL1,CSHL1,CSHL1,GH1,GH1,CSHL1,GH1,GH1,TCAM1P,GH1	-184,-184,-184,7116,7116,-184,7116,7116,-54077,7116
chr5:134913914-134914206	chr5	+	134913947	134914221	True	NM_004887,NM_145282	chr5,chr5	-,+	CXCL14,SLC25A48	798,256143
chr14:105938558-105940269	chr14	+	105938602	105940120	True	NM_001312,NM_001519	chr14,chr14	+,-	CRIP2,BRF1	1010,-171273
chr5:60240546-60240849	chr5	+	60240606	60240884	True	NM_000082,NM_174889	chr5,chr5	-,+	ERCC8,NDUFAF2	71,71
chrX:150905631-150907603	chrX	+	150905833	150907633	True	NR_029973,NM_005140	chrX,chrX	-,+	MIR452,CNGA2	220601,-2666
chr1:8877268-8877668	chr1	+	8877377	8877709	True	NM_001215,NM_001042681,NM_012102	chr1,chr1,chr1	+,-,-	CA6,RERE,RERE	128212,40,40
chr7:63662507-63664159	chr7	+	63662943	63664132	True	NM_001159524,NM_178558	chr7,chr7	+,-	ZNF735,ZNF680	3448,359423
chr5:61715782-61716040	chr5	+	61715782	61715842	True	NM_014473,NM_016338,NM_001134779	chr5,chr5,chr5	-,+,+	DIMT1L,IPO11,IPO11	-16054,-7260,-1122
chr2:54952254-54952476	chr2	+	54952264	54952402	True	NM_001039753,NM_007008	chr2,chr2	+,-	EML6,RTN4	-166,285118
chr1:46709424-46711375	chr1	+	46710316	46711189	True	NM_003579,NM_001142548,NR_024332	chr1,chr1,chr1	+,+,-	RAD54L,RAD54L,POMGNT1	2177,2177,-24339
chr7:102107158-102107735	chr7	+	102107657	102107747	True	NM_152892,NM_017621	chr7,chr7	+,-	LRWD1,ALKBH4	-2318,-2336
chr22:32449881-32450868	chr22	+	32450190	32450619	True	NM_001010859,NR_033411	chr22,chr22	-,+	C22orf42,SLC5A1	104675,4537
chr7:27214350-27214658	chr7	+	27214446	27214696	True	NM_018951,NR_037940,NR_037939,NR_029911,NM_153715,NR_002795,NM_152739	chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,+,-	HOXA10,HOXA10-HOXA9,HOXA10,MIR196B,HOXA10,HOXA11-AS1,HOXA9	-491,5234,5234,-5264,5230,10330,-9297
chr1:23674452-23674988	chr1	+	23674654	23674895	True	NR_033690,NM_001102398,NM_001102399,NM_005826,NM_001102397	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	C1orf213,HNRNPR,HNRNPR,HNRNPR,HNRNPR	20568,-3801,-3801,-3801,-3801
chr11:829180-829526	chr11	+	829194	829468	True	NM_001039490,NM_021128,NM_173584,NM_139030,NM_004357,NM_139029	chr11,chr11,chr11,chr11,chr11,chr11	+,-,+,+,+,+	CD151,POLR2L,EFCAB4A,CD151,CD151,CD151	3483,13111,-1660,3483,3483,3483
chr1:201345783-201347324	chr1	+	201346192	201347316	True	NM_000364,NM_001005337,NM_001001431,NM_001001430,NM_001001432	chr1,chr1,chr1,chr1,chr1	-,+,-,-,-	TNNT2,PKP1,TNNT2,TNNT2,TNNT2	-235,-93664,-235,-235,-235
chr14:24630889-24631388	chr14	+	24630950	24631280	True	NM_001048205,NM_005132,NM_006084,NM_002818	chr14,chr14,chr14,chr14	+,+,+,-	REC8,REC8,IRF9,PSME2	9953,9953,-579,-15095
chrX:118923492-118924191	chrX	+	118923586	118924202	True	NM_001000,NR_002584,NM_001105576	chrX,chrX,chrX	-,-,+	RPL39,SNORA69,ANKRD58	1460,-2139,-31061
chr17:66506719-66507801	chr17	+	66506756	66507644	True	NR_027751,NM_212472,NM_212471,NM_002734	chr17,chr17,chr17,chr17	-,+,+,+	FAM20A,PRKAR1A,PRKAR1A,PRKAR1A	46974,898,465,898
chr4:234697-235839	chr4	+	234813	235850	True	NM_001137608,NR_027481	chr4,chr4	-,+	ZNF732,ZNF876P	54144,-28484
chr7:96635253-96635472	chr7	+	96635276	96635372	True	NM_005222,NR_015448	chr7,chr7	+,-	DLX6,DLX6-AS1	-37,8055
chr8:23259738-23260498	chr8	+	23260007	23260387	True	NM_001136108,NM_002318	chr8,chr8	+,-	R3HCC1,LOXL2	-114447,1392
chr1:9085003-9085257	chr1	+	9085029	9085175	True	NM_001215,NM_207420	chr1,chr1	+,-	CA6,SLC2A7	-79158,1279
chr19:57969451-57970493	chr19	+	57969450	57970227	True	NM_020633,NM_001023561	chr19,chr19	-,+	VN1R1,ZNF749	-1343,-22816
chr16:81818061-81818708	chr16	+	81818132	81818724	True	NM_002661,NM_145168	chr16,chr16	+,-	PLCG2,SDR42E1	-5253,226419
chr5:39211704-39212332	chr5	+	39211853	39212115	True	NM_199335,NM_001465,NM_003999	chr5,chr5,chr5	-,-,+	FYB,FYB,OSMR	7602,7602,-365803
chr21:46235894-46237106	chr21	+	46236022	46236610	True	NM_198699,NM_006936	chr21,chr21	+,-	KRTAP10-12,SUMO3	-118986,1484
chr1:181001339-181002175	chr1	+	181001340	181002215	True	NM_005819,NM_001531,NM_001195000,NM_001195035,NM_001194999	chr1,chr1,chr1,chr1,chr1	-,+,+,+,+	STX6,MR1,MR1,MR1,MR1	-9294,345,345,345,345
chr16:66913817-66914302	chr16	+	66913826	66914236	True	NM_020786,NM_001204744	chr16,chr16	+,-	PDP2,CDH16	146,38701
chr19:14247739-14248160	chr19	+	14247799	14248151	True	NR_024282,NM_018154	chr19,chr19	+,-	LOC113230,ASF1B	-64029,-359
chr8:21647754-21648060	chr8	+	21647833	21648043	True	NM_001495,NM_001165038,NM_001165039,NM_015024	chr8,chr8,chr8,chr8	-,-,-,+	GFRA2,GFRA2,GFRA2,XPO7	-1487,-1487,-1487,129136
chr12:120970213-120971151	chr12	+	120970259	120970651	True	NM_014868,NM_032314	chr12,chr12	+,-	RNF10,COQ5	1480,-3295
chr9:97137291-97137596	chr9	+	97137344	97137550	True	NM_017561,NM_032558	chr9,chr9	-,+	FAM22F,HIATL1	-46418,-571
chr9:97137291-97137596	chr9	-	99775237	99775406	False	NM_001045477,NR_002894	chr9,chr9	+,-	FAM22G,HIATL2	-84003,515
chr3:195538203-195538526	chr3	+	195538411	195538511	True	NM_018406,NM_138297,NM_001098516,NM_004532	chr3,chr3,chr3,chr3	-,-,+,-	MUC4,MUC4,MUC20,MUC4	687,687,-87364,687
chr19:2821364-2822445	chr19	+	2821372	2822494	True	NM_003021,NM_001102651	chr19,chr19	-,+	SGTA,ZNF554	-38018,-1551
chrX:48619768-48620415	chrX	+	48619972	48620352	True	NM_013271,NM_001080489	chrX,chrX	-,+	PCSK1N,GLOD5	73658,-43
chr8:145491306-145491564	chr8	+	145491332	145491560	True	NM_001008271,NM_015201,NM_001080514	chr8,chr8,chr8	+,-,+	SCXA,BOP1,SCXB	-780,23610,-780
chr8:145491306-145491564	chr8	+	145322380	145322474	False	NM_030974,NM_001008271,NM_001080514	chr8,chr8,chr8	-,+,+	SHARPIN,SCXA,SCXB	-163240,-914,-914
chr12:57848457-57849546	chr12	+	57848733	57849517	True	NM_001167609,NM_001080156,NM_031479,NM_005269,NM_001160045	chr12,chr12,chr12,chr12,chr12	+,-,+,+,+	GLI1,ARHGAP9,INHBE,GLI1,GLI1	4416,22261,-52,4416,4400
chr16:53738199-53738437	chr16	+	53738203	53738479	True	NM_001080432,NM_015272,NM_001127897	chr16,chr16,chr16	+,-,-	FTO,RPGRIP1L,RPGRIP1L	-379,-432,-432
chr21:17099634-17101344	chr21	+	17099891	17101258	True	NM_003489,NM_013396	chr21,chr21	-,+	NRIP1,USP25	-662765,1237
chrX:103269592-103269917	chrX	+	103269611	103269749	True	NM_001002916,NM_001164416	chrX,chrX	-,+	H2BFWT,H2BFM	-1355,24766
chr19:40733115-40734304	chr19	+	40733288	40734310	True	NM_002446,NM_152479,NM_024877	chr19,chr19,chr19	+,-,-	MAP3K10,TTC9B,CNTD2	-35688,-8982,-691
chr1:23809162-23809976	chr1	+	23809479	23809935	True	NR_033691,NM_001143778,NM_017707	chr1,chr1,chr1	+,-,-	C1orf213,ASAP3,ASAP3	-113819,865,865
chr20:58633421-58633750	chr20	+	58633440	58633632	True	NM_173644,NM_006242	chr20,chr20	+,-	C20orf197,PPP1R3D	-2511,-118088
chr16:87418986-87419471	chr16	+	87419078	87419320	True	NM_022818,NM_024735,NR_024568	chr16,chr16,chr16	+,-,-	MAP1LC3B,FBXO31,FBXO31	6480,-1684,6444
chr7:150785105-150785306	chr7	+	150785120	150785184	True	NM_031434,NM_031946,NM_001042535,NM_001136044,NM_033015,NM_006712	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,-,-,-	TMUB1,AGAP3,AGAP3,TMUB1,FASTK,FASTK	-4707,-1345,-1345,-4500,-7169,-7169
chr1:228333975-228334587	chr1	+	228334051	228334617	True	NM_000858,NM_020435,NM_181465,NM_001159390,NM_001159391	chr1,chr1,chr1,chr1,chr1	+,+,-,+,+	GUK1,GJC2,MRPL55,GUK1,GUK1	-6173,2935,-37038,-6173,-1698
chr12:57943039-57943895	chr12	+	57943101	57943871	True	NM_004984,NM_006400	chr12,chr12	+,-	KIF5A,DCTN2	-25,-2123
chr5:139415674-139417214	chr5	+	139415751	139417106	True	NM_001184935,NM_013982,NM_013983,NM_013981,NM_004883,NM_005859	chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,-,+	NRG2,NRG2,NRG2,NRG2,NRG2,PURA	5829,5829,5829,5829,5829,76601
chr16:79708714-79709672	chr16	+	79708754	79709544	True	NM_005360,NM_130897	chr16,chr16	-,+	MAF,DYNLRB2	-74132,865309
chr17:48502927-48503180	chr17	+	48502936	48503180	True	NM_025149,NM_018509	chr17,chr17	+,-	ACSF2,LRRC59	338,-28022
chr2:20785924-20786226	chr2	+	20785950	20786258	True	NM_022460,NM_182828	chr2,chr2	-,+	HS1BP3,GDF7	64656,80165
chr8:124284096-124285968	chr8	+	124284128	124285776	True	NR_037874,NR_037873,NM_001204180,NM_007222,NM_207006,NM_001017926	chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,+,-	ZHX1,ZHX1,ZHX1-C8ORF76,ZHX1,FAM83A,ZHX1	1002,2056,1002,1002,-89438,1002
chr10:99077410-99078110	chr10	+	99077641	99077717	True	NM_005479,NM_012083	chr10,chr10	+,-	FRAT1,FRAT2	1304,16791
chr4:17617154-17617674	chr4	+	17617494	17617589	True	NM_025205,NM_000320	chr4,chr4	+,-	MED28,QDPR	-1287,-103637
chr4:42152967-42153359	chr4	+	42153152	42153310	True	NM_207406,NM_006345,NM_001159547	chr4,chr4,chr4	-,+,-	BEND4,SLC30A9,BEND4	1635,-160680,1635
chr14:57040817-57041788	chr14	+	57040816	57041764	True	NM_017799,NM_172337	chr14,chr14	+,-	C14orf101,OTX2	4746,230631
chrX:151285064-151286198	chrX	+	151285063	151286180	True	NM_001011550,NM_021049	chrX,chrX	+,-	MAGEA4,MAGEA5	-198354,314
chr19:11450351-11450712	chr19	+	11450429	11450727	True	NM_001080503,NM_001145416,NM_033408,NM_004283,NM_198536	chr19,chr19,chr19,chr19,chr19	+,-,-,-,-	CCDC159,TMEM205,TMEM205,RAB3D,TMEM205	6453,6304,6304,-85,6304
chr7:90032759-90033064	chr7	+	90032833	90033091	True	NM_006980,NM_001185072,NM_001185073,NM_012129	chr7,chr7,chr7,chr7	-,+,+,+	MTERF,CLDN12,CLDN12,CLDN12	1476975,-236,-236,-236
chr1:160376811-160377043	chr1	+	160376831	160377089	True	NM_004371,NM_020335	chr1,chr1	-,+	COPA,VANGL2	-63477,-6518
chr19:410492-410795	chr19	+	410504	410564	True	NM_001136263,NM_130760	chr19,chr19	-,+	C2CD4C,MADCAM1	-1334,85925
chr14:102226399-102226802	chr14	+	102226405	102226717	True	NM_001161725,NM_001161726,NR_031649	chr14,chr14,chr14	+,+,-	PPP2R5C,PPP2R5C,MIR1247	1417,1417,-199646
chr11:72502469-72503059	chr11	+	72502804	72502901	True	NM_033388,NM_006645	chr11,chr11	+,-	ATG16L2,STARD10	22549,1908
chr5:148961705-148962790	chr5	+	148961834	148962659	True	NM_001892,NM_001001669	chr5,chr5	-,+	CSNK1A1,ARHGEF37	-30827,-751
chr16:88706365-88706749	chr16	+	88706661	88706741	True	NM_013278,NM_000101	chr16,chr16	+,-	IL17C,CYBA	-1711,10766
chr2:128570136-128571629	chr2	+	128570168	128571412	True	NM_032740,NM_018383,NM_001006622,NM_001006623	chr2,chr2,chr2,chr2	+,-,-,-	SFT2D3,WDR33,WDR33,WDR33	-111622,-1407,-1407,-1407
chr17:7793969-7795101	chr17	+	7794066	7794910	True	NM_005852,NM_001005273,NR_024349,NM_001005271	chr17,chr17,chr17,chr17	+,+,-,+	CHD3,CHD3,LOC284023,CHD3	-1948,-1948,24405,-5994
chr5:36068270-36068883	chr5	+	36068412	36068596	True	NM_174914,NM_005983,NM_001168316,NR_031764	chr5,chr5,chr5,chr5	-,+,-,-	UGT3A2,SKP2,UGT3A2,UGT3A2	-1389,83592,-1389,-1389
chr1:24309632-24309981	chr1	+	24309773	24310023	True	NM_006625,NR_034035,NM_054016,NM_017761,NM_001191009,NM_001191006,NM_001191007,NM_001191005	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,-,-,-	SRSF10,SRSF10,SRSF10,PNRC2,SRSF10,SRSF10,SRSF10,SRSF10	-2820,-2820,-2820,-23525,-2820,-2820,-2820,-2820
chr2:174676235-174676726	chr2	+	174676550	174676713	True	NM_145810,NM_001017371	chr2,chr2	+,-	CDCA7,SP3	-457045,152289
chr7:132771210-132772587	chr7	+	132771253	132772586	True	NM_001037126,NM_017812	chr7,chr7	+,-	EXOC4,CHCHD3	165236,-4425
chr16:56660395-56660746	chr16	+	56660475	56660773	True	NM_175617,NR_036677,NM_176870,NR_001447,NM_005950	chr16,chr16,chr16,chr16,chr16	+,+,+,+,-	MT1E,MT1JP,MT1M,MT1L,MT1G	-941,8877,5760,-9153,41254
chr16:56660395-56660746	chr16	+	56667423	56667473	False	NM_005946,NM_175617,NR_036677,NM_176870,NM_005950	chr16,chr16,chr16,chr16,chr16	+,+,+,+,-	MT1A,MT1E,MT1JP,MT1M,MT1G	5104,-7889,2177,-940,34554
chrX:150735380-150735790	chrX	+	150735603	150735825	True	NR_029973,NM_173493	chrX,chrX	-,+	MIR452,PASD1	392409,-3647
chr10:5857671-5859252	chr10	+	5858251	5858963	True	NM_001115156,NM_001494,NM_178150	chr10,chr10,chr10	-,-,+	GDI2,GDI2,FBXO18	-2739,-2739,73250
chr10:94353102-94353354	chr10	+	94353124	94353370	True	NM_004969,NM_004523	chr10,chr10	-,+	IDE,KIF11	-19272,-350
chr6:145957033-145957356	chr6	+	145957129	145957216	True	NM_000838,NM_001018041	chr6,chr6	+,-	GRM1,EPM2A	391565,99836
chr6:26688853-26689770	chr6	+	26688889	26689752	True	NM_013375,NM_024639	chr6,chr6	+,-	ABT1,ZNF322A	-91760,-28926
chr6:26688853-26689770	chr6	-	58180494	58181348	False	NM_000947,NR_003660	chr6,chr6	+,-	PRIM2,GUSBP4	-998130,106426
chr6:42015965-42016212	chr6	+	42016049	42016137	True	NM_138572,NM_001136126,NM_001136017	chr6,chr6,chr6	+,-,-	TAF8,CCND3,CCND3	2113,523,523
chr11:57487147-57488628	chr11	+	57487319	57488325	True	NR_037645,NM_015959,NM_001144012,NR_037646,NM_153450,NR_026593	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,-,+	TMX2,TMX2,TMX2,TMX2-CTNND1,MED19,TMX2	-7380,-7380,-7380,-7380,-7646,-7380
chr3:186078219-186078780	chr3	+	186078229	186078747	True	NM_016306,NM_001080744,NM_001080745,NM_001346	chr3,chr3,chr3,chr3	+,-,-,-	DNAJB11,DGKG,DGKG,DGKG	209719,1326,1326,1326
chr1:143389878-143390972	chr1	+	143390443	143390875	True	NR_033189,NR_027468	chr1,chr1	+,-	LOC100130000,FLJ39739	296254,353640
chr22:21055259-21056257	chr22	+	21055429	21056140	True	NM_002650,NR_026815	chr22,chr22	-,+	PI4KA,TMEM191A	32865,-78
chr22:21055259-21056257	chr22	+	20377643	20377693	False	NR_003563,NR_026919	chr22,chr22	-,+	PI4KAP1,LOC150197	21052,-183839
chr22:21055259-21056257	chr22	+	21821403	21821453	False	NM_015094,NR_003700	chr22,chr22	+,-	HIC2,PI4KAP2	-49761,50377
chr6:36972877-36973091	chr6	+	36972981	36973087	True	NM_173558,NM_014341	chr6,chr6	+,-	FGD2,MTCH1	335,-19032
chr19:54568341-54568860	chr19	+	54568356	54568800	True	NM_198481,NM_004542	chr19,chr19	-,+	VSTM1,NDUFA3	-1149,37359
chr17:37860748-37861626	chr17	+	37860964	37861516	True	NM_033419,NM_004448	chr17,chr17	-,+	PGAP3,ERBB2	-16654,-4761
chr8:87905095-87906328	chr8	+	87905294	87906176	True	NM_019098,NM_173538	chr8,chr8	-,+	CNGB3,CNBD1	-149391,-26670
chrX:22288371-22289168	chrX	+	22288557	22289081	True	NM_152577,NM_014332	chrX,chrX	+,-	ZNF645,SMPX	1978,-512327
chr16:5082626-5082991	chr16	+	5082826	5083009	True	NM_019109,NM_016256	chr16,chr16	+,-	ALG1,NAGPA	38800,994
chr16:28606260-28607102	chr16	+	28606582	28606988	True	NM_138414,NM_177528,NM_001054	chr16,chr16,chr16	+,-,-	CCDC101,SULT1A2,SULT1A2	-41384,863,1453
chr8:142516559-142517125	chr8	+	142516646	142516980	True	NM_032611,NM_207414	chr8,chr8	+,-	PTP4A3,FLJ43860	-84690,400
chr7:140799778-140801426	chr7	+	140799915	140801268	True	NM_053035,NM_001195278	chr7,chr7	-,+	MRPS33,LOC100131199	-85134,-25942
chr1:28427360-28427873	chr1	+	28427359	28427886	True	NR_027268,NM_016311	chr1,chr1	-,+	LOC653566,ATPIF1	-4290,134715
chr14:105157935-105158255	chr14	+	105157992	105158058	True	NM_207379,NM_032714,NM_001031714,NM_022489	chr14,chr14,chr14,chr14	-,+,+,+	TMEM179,INF2,INF2,INF2	-86895,-2100,-2100,-2100
chr12:108992562-108994473	chr12	+	108992993	108994351	True	NM_181724,NM_213595	chr12,chr12	-,+	TMEM119,ISCU	-1099,-36750
chr8:41434895-41435387	chr8	+	41434898	41435378	True	NM_152568,NM_178819	chr8,chr8	-,+	NKX6-3,AGPAT6	69550,328
chr2:182853217-182854955	chr2	+	182853301	182854645	True	NM_002500,NM_001080545	chr2,chr2	-,+	NEUROD1,PPP1R1C	-307909,-2808
chr1:231005550-231006104	chr1	+	231005570	231006112	True	NM_001136494,NM_032800,NM_022786	chr1,chr1,chr1	-,-,+	C1orf198,C1orf198,ARV1	-235,-1268,108710
chr1:36531558-36531881	chr1	+	36531684	36531885	True	NM_005202,NM_014466	chr1,chr1	-,+	COL8A2,TEKT2	34016,17790
chr3:42630142-42630439	chr3	+	42630190	42630462	True	NM_016305,NM_004206,NM_032970,NM_001201584	chr3,chr3,chr3,chr3	+,-,-,-	SS18L2,SEC22C,SEC22C,SEC22C	1835,-6670,-6670,-6670
chr17:36828881-36829228	chr17	+	36828941	36829263	True	NM_005937,NM_001130677	chr17,chr17	+,-	MLLT6,C17orf96	32609,1974
chr21:32996135-32997087	chr21	+	32996528	32997095	True	NM_000454,NM_003253	chr21,chr21	+,-	SOD1,TIAM1	34839,-65238
chr2:238393619-238395077	chr2	+	238393925	238395076	True	NM_001042467,NM_024101,NM_057165	chr2,chr2,chr2	+,+,-	MLPH,MLPH,COL6A3	801,801,-71075
chr6:150217024-150217282	chr6	+	150217111	150217319	True	NM_025217,NM_139165	chr6,chr6	+,-	ULBP2,RAET1E	45816,-5014
chr10:76868154-76868620	chr10	+	76868173	76868521	True	NM_001007271,NM_001007273,NM_001007272,NM_016364,NM_144660,NM_001174156	chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,+,+	DUSP13,DUSP13,DUSP13,DUSP13,SAMD8,SAMD8	499,499,499,-8925,2871,2871
chr4:15681835-15682961	chr4	+	15681861	15682928	True	NM_001145191,NR_036464	chr4,chr4	+,-	FAM200B,FBXL5	423,-24826
chr1:203463236-203464616	chr1	+	203463450	203464315	True	NM_002023,NM_014359	chr1,chr1	-,+	FMOD,OPTC	-143161,-234
chr19:12163895-12164825	chr19	+	12163972	12164388	True	NM_001136501,NM_001080404	chr19,chr19	+,-	ZNF844,ZNF878	11157,2797
chr1:13912681-13912923	chr1	+	13912685	13912963	True	NM_006474,NM_001010847,NM_001006625,NM_001006624,NM_198389	chr1,chr1,chr1,chr1,chr1	+,-,+,+,+	PDPN,LRRC38,PDPN,PDPN,PDPN	-2484,-72443,-769,-769,-2484
chr15:80444671-80444891	chr15	+	80444674	80444901	True	NM_000137,NM_004049	chr15,chr15	+,-	FAH,BCL2A1	439,-181031
chr2:128455291-128456247	chr2	+	128455414	128456179	True	NM_032740,NM_001161404	chr2,chr2	+,-	SFT2D3,LIMS2	2417,-16054
chr4:8592055-8592811	chr4	+	8592064	8592776	True	NM_001014447,NM_003501,NM_080819,NM_001014448,NM_003652	chr4,chr4,chr4,chr4,chr4	+,-,+,+,+	CPZ,ACOX3,GPR78,CPZ,CPZ	1610,-149612,-9824,1610,1610
chr2:23685792-23686492	chr2	+	23685882	23686447	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	463544,-77645
chr1:162474723-162476509	chr1	+	162475278	162476460	True	NM_175866,NM_053282,NM_144624,NM_001184763	chr1,chr1,chr1,chr1	+,-,+,+	UHMK1,SH2D1B,UHMK1,UHMK1	-7734,-93350,-7734,-8365
chr1:36862292-36862619	chr1	+	36862608	36862669	True	NM_032881,NM_024676	chr1,chr1	-,+	LSM10,SH3D21	875,-89951
chr19:42830469-42830811	chr19	+	42830520	42830828	True	NM_001145940,NM_001410	chr19,chr19	-,+	PAFAH1B3,MEGF8	-23568,-810
chr1:26759866-26761290	chr1	+	26760181	26761121	True	NM_024887,NM_205861,NM_173574	chr1,chr1,chr1	+,+,-	DHDDS,DHDDS,ZNF683	-1434,-1434,-60915
chrX:133511794-133512290	chrX	+	133511794	133512325	True	NM_032458,NM_001015877,NM_032335,NR_030587	chrX,chrX,chrX,chrX	+,+,+,-	PHF6,PHF6,PHF6,MIR450B	-4504,-4504,-4504,162020
chr6:111303466-111305086	chr6	+	111303577	111304335	True	NM_032194,NR_002932	chr6,chr6	+,-	RPF2,GSTM2P1	-337,64472
chr7:55918692-55919421	chr7	+	55918932	55919222	True	NM_182633,NM_207366	chr7,chr7	+,-	ZNF713,SEPT14	61108,11320
chr10:123924959-123925682	chr10	+	123925001	123925568	True	NM_006997,NM_017615,NM_206860	chr10,chr10,chr10	+,-,+	TACC2,NSMCE4A,TACC2	-1947,-190258,-1947
chr10:28030950-28031213	chr10	+	28030998	28031128	True	NM_021252,NM_173576	chr10,chr10	+,-	RAB18,MKX	-237801,3700
chr20:50386486-50387046	chr20	+	50386586	50386935	True	NM_006045,NM_014484	chr20,chr20	-,+	ATP9A,MOCS3	-1678,-811274
chr11:122855041-122855253	chr11	+	122855057	122855213	True	NR_027288,NM_001098169	chr11,chr11	+,-	LOC341056,BSX	33060,-2678
chr14:73525228-73525444	chr14	+	73525263	73525467	True	NM_021239,NM_021260	chr14,chr14	+,-	RBM25,ZFYVE1	-93,-31343
chr14:51134115-51134516	chr14	+	51134145	51134507	True	NM_021818,NM_181598	chr14,chr14	-,+	SAV1,ATL1	566,-107453
chr16:46920122-46920416	chr16	+	46920198	46920406	True	NM_133443,NM_001142466,NM_001001436	chr16,chr16,chr16	+,+,-	GPT2,GPT2,C16orf87	-1941,-1147,-55124
chr2:131277878-131278951	chr2	+	131278026	131278902	True	NR_027314,NM_032545,NM_001079530	chr2,chr2,chr2	-,+,+	LOC150527,CFC1,CFC1B	28616,-67,42
chr2:131277878-131278951	chr2	-	131357015	131357891	False	NR_027314,NM_032545,NM_001079530	chr2,chr2,chr2	+,-,-	LOC150527,CFC1,CFC1B	-28644,67,-42
chr10:95719623-95720145	chr10	+	95719654	95720186	True	NR_002319,NM_016341	chr10,chr10	-,+	PIPSL,PLCE1	1536,33559
chr11:20380865-20381788	chr11	+	20380881	20381826	True	NM_001029865,NM_006410,NM_001098521,NM_001098520,NM_001098523,NM_001098522	chr11,chr11,chr11,chr11,chr11,chr11	-,+,+,+,+,+	DBX1,HTATIP2,HTATIP2,HTATIP2,HTATIP2,HTATIP2	-199011,3404,3420,3462,3860,3576
chr8:125730873-125732216	chr8	+	125731027	125732217	True	NM_005005,NM_014751	chr8,chr8	+,-	NDUFB9,MTSS1	-179735,8563
chr22:42980115-42981012	chr22	+	42980201	42980999	True	NR_002184,NM_014509,NR_029422	chr22,chr22,chr22	-,+,+	RRP7B,SERHL2,RNU12	-2184,-30327,30251
chr12:7902875-7904208	chr12	+	7902983	7904179	True	NM_203503,NM_001145465,NM_130441	chr12,chr12,chr12	-,+,-	CLEC4C,NANOGNB,CLEC4C	-914,13632,-914
chr2:73868257-73868653	chr2	+	73868315	73868663	True	NM_003960,NR_003683	chr2,chr2	-,+	NAT8,ALMS1P	924,3382
chr13:19583660-19583906	chr13	+	19583694	19583954	True	NR_002801,NR_026852	chr13,chr13	-,+	PHF2P1,LOC348021	108519,-1354
chr6:150040304-150041401	chr6	+	150040437	150041205	True	NM_004690,NM_005389	chr6,chr6	-,+	LATS1,PCMT1	-1045,29625
chr20:43514816-43515158	chr20	+	43514890	43515184	True	NM_006809,NM_139323,NM_003404	chr20,chr20,chr20	-,+,+	TOMM34,YWHAB,YWHAB	73980,-597,-597
chr3:134204296-134204770	chr3	+	134204363	134204769	True	NM_025180,NM_001042400,NM_001042384,NM_015391,NM_001042383,NR_024400,NR_024401	chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,-,+,-,-	CEP63,CEP63,CEP63,ANAPC13,CEP63,ANAPC13,ANAPC13	277,127,50,144,50,146,112
chr8:133493740-133494099	chr8	+	133493747	133494113	True	NM_004519,NM_198513	chr8,chr8	-,+	KCNQ3,PHF20L1	-743,293490
chr2:197664970-197665197	chr2	+	197665041	197665245	True	NM_001080539,NM_213608,NM_012086	chr2,chr2,chr2	+,-,-	CCDC150,C2orf66,GTF3C3	-160746,9805,-616
chr2:1747710-1747971	chr2	+	1747742	1747802	True	NM_012293,NM_175722	chr2,chr2	-,+	PXDN,TPO	539,-329613
chr11:77773656-77774980	chr11	+	77773770	77775008	True	NM_001203260,NM_003251	chr11,chr11	-,+	NDUFC2-KCTD14,THRSP	16307,-102
chr7:5920871-5921487	chr7	+	5921277	5921459	True	NM_001097622,NM_001099697	chr7,chr7	+,-	OCM,RSPH10B2	-905,88905
chr19:28284950-28285273	chr19	+	28285015	28285117	True	NR_027318,NR_027301	chr19,chr19	+,-	LOC148145,LOC148189	1170920,-167
chr13:51797287-51797739	chr13	+	51797342	51797680	True	NR_003923,NM_145019	chr13,chr13	-,+	GUCY1B2,FAM124A	-157049,-888
chr7:35077634-35078095	chr7	+	35077688	35078118	True	NM_015283,NM_207173	chr7,chr7	-,+	DPY19L1,NPSR1	-35,-379842
chr9:71959748-71960989	chr9	+	71959780	71960906	True	NM_001163,NM_004816	chr9,chr9	-,+	APBA1,FAM189A2	326425,-15590
chr1:10459816-10460168	chr1	+	10459854	10460188	True	NM_004401,NM_002631	chr1,chr1	-,+	DFFA,PGD	72475,-820
chr1:157106133-157107368	chr1	+	157106136	157107274	True	NM_001145312,NR_001560,NM_005240	chr1,chr1,chr1	-,+,-	ETV3,CYCSP52,ETV3	1159,-8033,953
chr21:43440055-43440882	chr21	+	43440201	43440799	True	NR_027273,NM_020727,NM_001098402,NM_001098403	chr21,chr21,chr21,chr21	+,-,-,-	C21orf121,ZNF295,ZNF295,ZNF295	1313,-9705,-9705,-9705
chr3:133472199-133473270	chr3	+	133472210	133473030	True	NM_001063,NM_007027	chr3,chr3	+,-	TF,TOPBP1	-7284,-91473
chr13:28710178-28711175	chr13	+	28710382	28711223	True	NR_029383,NM_175854	chr13,chr13	-,+	LOC100288730,PAN3	2138,1419
chr15:75640590-75640903	chr15	+	75640643	75640787	True	NR_030360,NM_024608	chr15,chr15	-,+	MIR631,NEIL1	5289,-1363
chr11:35440156-35440427	chr11	+	35440194	35440334	True	NM_014344,NM_004171,NM_001195728	chr11,chr11,chr11	+,-,-	FJX1,SLC1A2,SLC1A2	199400,821,1248
chr15:60914818-60915208	chr15	+	60914839	60915257	True	NM_012182,NM_002943,NM_134260	chr15,chr15,chr15	+,-,-	FOXB1,RORA,RORA	-618479,4522,4522
chr8:91374369-91375152	chr8	+	91374404	91374952	True	NM_004929,NM_001359	chr8,chr8	-,+	CALB1,DECR1	-279297,-360885
chr11:86754156-86755982	chr11	+	86754802	86755574	True	NR_033149,NM_012193,NM_022918,NM_001168724	chr11,chr11,chr11,chr11	+,-,+,+	TMEM135,FZD4,TMEM135,TMEM135	-5971,-88369,-5971,-5971
chr4:99847171-99847547	chr4	+	99847185	99847422	True	NM_001130678,NM_001130679,NM_015143,NM_001968	chr4,chr4,chr4,chr4	-,-,+,-	EIF4E,EIF4E,METAP1,EIF4E	2872,4415,69365,4415
chr22:45555229-45556997	chr22	+	45555791	45556589	True	NM_007172,NR_031651,NM_153645	chr22,chr22,chr22	+,-,+	NUP50,MIR1249,NUP50	3136,40361,3962
chr13:44419770-44420369	chr13	+	44419885	44420202	True	NM_001128303,NM_144974	chr13,chr13	+,-	C13orf31,CCDC122	33217,33685
chr2:202506008-202506553	chr2	+	202506064	202506531	True	NM_152388,NM_001044385,NM_139158	chr2,chr2,chr2	-,-,+	ALS2CR4,ALS2CR4,CDK15	930,1744,164666
chr19:53753216-53754618	chr19	+	53753590	53754635	True	NM_182609,NM_173856	chr19,chr19	-,+	ZNF677,VN1R2	3526,6909
chr9:34726591-34727578	chr9	+	34726776	34727571	True	NM_004512,NM_001141917	chr9,chr9	+,-	IL11RA,C9orf144B	-72895,2015
chr5:134242477-134243403	chr5	+	134242477	134243303	True	NM_032151,NM_002653	chr5,chr5	+,-	PCBD2,PITX1	-1720,126724
chr13:33108955-33109834	chr13	+	33109105	33109521	True	NM_014887,NM_015032,NM_033111	chr13,chr13,chr13	-,+,-	N4BP2L2,PDS5B,N4BP2L2	3475,51042,3479
chr12:14516368-14516996	chr12	+	14516516	14516910	True	NM_024829,NM_018179	chr12,chr12	-,+	PLBD1,ATF7IP	203937,1700
chr3:113160455-113160703	chr3	+	113160459	113160675	True	NM_018338,NM_017699,NM_001164496	chr3,chr3,chr3	-,+,-	WDR52,SIDT1,WDR52	-98,90542,-98
chr17:20223016-20223512	chr17	+	20223191	20223372	True	NM_001042685,NR_023380	chr17,chr17	-,+	LGALS9B,CCDC144C	147533,1114
chr7:135662298-135663536	chr7	+	135662328	135663543	True	NM_145808,NM_001130929,NM_001128619	chr7,chr7,chr7	-,+,-	MTPN,PL-5283,LUZP6	-124,-315158,-124
chr6:36411214-36412758	chr6	+	36411236	36412767	True	NM_173562,NM_152990	chr6,chr6	+,-	KCTD20,PXT1	-746,-570
chr3:138826998-138827278	chr3	+	138827104	138827316	True	NM_001134657,NR_026783	chr3,chr3	-,+	PRR23C,BPESC1	-63370,-4128
chr5:140099728-140101326	chr5	+	140099912	140101031	True	NR_026705,NR_026704,NM_002109,NR_026703	chr5,chr5,chr5,chr5	+,+,-,+	VTRNA1-3,VTRNA1-2,HARS,VTRNA1-1	4712,-1452,-28941,-9102
chr5:140099728-140101326	chr5	+	140091913	140092300	False	NR_026704,NM_002109,NR_026703	chr5,chr5,chr5	+,-,+	VTRNA1-2,HARS,VTRNA1-1	6210,-20942,-1440
chr5:140099728-140101326	chr5	+	140107657	140107708	False	NR_026705,NR_026704,NM_002109	chr5,chr5,chr5	+,+,-	VTRNA1-3,VTRNA1-2,HARS	-1965,-9198,-36686
chr18:48406219-48407557	chr18	+	48406253	48407223	True	NM_001168335,NM_002396,NM_001127174	chr18,chr18,chr18	+,+,-	ME2,ME2,MRO	-877,-877,-54499
chr6:33714693-33715329	chr6	+	33715096	33715304	True	NM_001142883,NM_054111,NM_002224	chr6,chr6,chr6	-,-,+	IP6K3,IP6K3,ITPR3	-334,-334,-125991
chr1:109853083-109854174	chr1	+	109853187	109854136	True	NM_001408,NM_001010985	chr1,chr1	+,-	CELSR2,MYBPHL	-60603,-3524
chr16:22215798-22216743	chr16	+	22215905	22216431	True	NM_001802,NM_013302	chr16,chr16	-,+	CDR2,EEF2K	169557,1160
chr19:14134617-14135615	chr19	+	14134687	14135142	True	NM_004843,NM_002918,NM_080864	chr19,chr19,chr19	+,-,+	IL27RA,RFX1,RLN3	7119,-17553,3874
chr6:84919386-84921167	chr6	+	84919509	84920608	True	NM_014895,NM_138409	chr6,chr6	-,+	KIAA1009,MRAP2	16778,-176148
chr22:37399928-37400486	chr22	+	37400027	37400399	True	NM_001013436,NM_178552,NM_001163857	chr22,chr22,chr22	+,-,-	MPST,C22orf33,C22orf33	15302,3528,3528
chr8:70393872-70394457	chr8	+	70394046	70394497	True	NM_001128205,NM_001146009	chr8,chr8	+,-	SULF1,SLCO5A1	10530,350964
chr16:57126915-57127165	chr16	+	57127015	57127113	True	NM_152727,NM_024946	chr16,chr16	+,-	CPNE2,FAM192A	-611,92913
chr9:119449785-119450911	chr9	+	119449902	119450908	True	NM_001099679,NM_198186,NM_198187,NM_012210,NM_001184734,NM_001184735,NM_198188	chr9,chr9,chr9,chr9,chr9,chr9,chr9	+,-,-,+,-,-,-	TRIM32,ASTN2,ASTN2,TRIM32,ASTN2,ASTN2,ASTN2	-372,-408,-360,-372,-360,-360,-360
chr3:186285725-186286409	chr3	+	186285798	186286389	True	NM_016306,NM_001134415,NM_018138	chr3,chr3,chr3	+,-,-	DNAJB11,TBCCD1,TBCCD1	2077,2000,-657
chrX:51148376-51149238	chrX	+	51148578	51149152	True	NM_018159,NM_153183	chrX,chrX	-,+	NUDT11,NUDT10	90357,-73558
chr11:131153652-131154312	chr11	+	131153657	131154350	True	NM_001048209,NM_014758	chr11,chr11	+,-	NTM,SNX19	86020,-367275
chr1:1369843-1370136	chr1	+	1369852	1370140	True	NM_199121,NR_026871,NM_001146685,NM_022834	chr1,chr1,chr1,chr1	+,-,+,+	VWA1,LOC441869,TMEM88B,VWA1	762,-13202,-8395,762
chr17:4843837-4844057	chr17	+	4843891	4844056	True	NM_001165418,NM_005022,NM_001165417,NM_003562,NM_000173,NM_015528	chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,+,+	SLC25A11,PFN1,SLC25A11,SLC25A11,GP1BA,RNF167	-429,7819,-429,-429,-8350,-312
chr4:55978990-55979549	chr4	+	55979054	55979586	True	NM_024592,NM_002253	chr4,chr4	+,-	SRD5A3,KDR	232801,12232
chr1:149870685-149871165	chr1	+	149870699	149870993	True	NM_175065,NM_016074	chr1,chr1	-,+	HIST2H2AB,BOLA1	-11233,161
chr11:8951695-8952470	chr11	+	8952033	8952467	True	NM_020643,NM_182901	chr11,chr11	-,+	C11orf16,C11orf17	2136,-19282
chr9:34624128-34624533	chr9	+	34624265	34624482	True	NM_000155,NM_001017363,NM_024348,NM_007234	chr9,chr9,chr9,chr9	+,-,-,-	GALT,ARID3C,DCTN3,DCTN3	22152,3579,-3769,-3769
chr10:75258325-75259797	chr10	+	75258374	75259761	True	NM_001142353,NM_021132,NM_004922,NM_001142354	chr10,chr10,chr10,chr10	-,-,+,-	PPP3CB,PPP3CB,SEC24C,PPP3CB	-2592,-2592,244369,-2592
chr6:111136077-111136743	chr6	+	111136214	111136788	True	NM_001634,NM_015076	chr6,chr6	+,-	AMD1,CDK19	59198,114
chr12:123831065-123831864	chr12	+	123831266	123831713	True	NM_018183,NM_020382,NM_001167856	chr12,chr12,chr12	-,+,-	SBNO1,SETD8,SBNO1	3325,36990,3325
chr6:37140086-37140370	chr6	+	37140162	37140418	True	NM_145316,NM_002648	chr6,chr6	-,+	TMEM217,PIM1	85045,-2292
chr11:74114497-74116021	chr11	+	74114774	74115940	True	NM_173582,NM_006591	chr11,chr11	-,+	PGM2L1,POLD3	-5272,187688
chr8:124808790-124810450	chr8	+	124809345	124810364	True	NM_004306,NM_144963	chr8,chr8	-,+	ANXA13,FAM91A1	-59698,-28514
chr8:37386675-37387323	chr8	+	37386712	37387322	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	165978,218292
chr19:12205266-12205949	chr19	+	12205568	12205707	True	NM_001080404,NR_027049	chr19,chr19	-,+	ZNF878,ZNF788	-38441,-2543
chr5:178451258-178451785	chr5	+	178451276	178451770	True	NM_001136116,NM_000843	chr5,chr5	+,-	ZNF879,GRM6	-551,-29152
chrX:21674773-21675078	chrX	+	21674838	21674924	True	NM_015884,NM_153270	chrX,chrX	+,-	MBTPS2,KLHL34	182731,1574
chr5:148650163-148650919	chr5	+	148650344	148650928	True	NM_001146337,NM_152406,NM_014443	chr5,chr5,chr5	+,+,-	AFAP1L1,AFAP1L1,IL17B	472,472,107960
chr8:125484504-125485415	chr8	+	125484713	125485455	True	NM_001146160,NM_007218	chr8,chr8	-,+	TATDN1,RNF139	65924,1552
chr10:35107106-35108221	chr10	+	35107268	35108056	True	NM_019619,NM_001184789,NM_001184788,NM_001184790,NM_001184791,NM_001184792,NM_001184793,NM_001184787,NM_001184786,NM_001184785,NM_001184794,NM_001881	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,-,-,-,-,-,-,-,+	PARD3,PARD3,PARD3,PARD3,PARD3,PARD3,PARD3,PARD3,PARD3,PARD3,PARD3,CREM	-3015,-3015,-3015,-3015,-3015,-3015,-3015,-3015,-3015,-3015,-3015,307744
chr14:90796405-90797488	chr14	+	90796595	90797254	True	NM_199043,NM_017970,NM_006888	chr14,chr14,chr14	-,-,+	C14orf102,C14orf102,CALM1	1075,1075,66072
chr19:58144968-58145308	chr19	+	58145009	58145299	True	NM_198855,NM_017879,NM_006385	chr19,chr19,chr19	+,-,+	ZNF211,ZNF416,ZNF211	-525,-54766,-525
chr1:233424441-233424737	chr1	+	233424447	233424531	True	NM_032435,NM_014801	chr1,chr1	+,-	KIAA1804,PCNXL2	38982,6978
chr2:74173889-74174761	chr2	+	74173991	74174725	True	NM_080918,NM_003584	chr2,chr2	+,-	DGUOK,DUSP11	-20089,-166707
chr14:101124718-101125006	chr14	+	101124777	101125043	True	NR_024096,NM_020836	chr14,chr14	+,-	C14orf70,BEGAIN	-1223,-88646
chr16:3550888-3551150	chr16	+	3550902	3551024	True	NM_015041,NM_024793,NM_001080524	chr16,chr16,chr16	+,+,-	CLUAP1,CLUAP1,C16orf90	10,8869,-5481
chr21:43824232-43824836	chr21	+	43824306	43824774	True	NM_018961,NM_024022,NM_032405,NM_001001895	chr21,chr21,chr21,chr21	+,-,-,+	UBASH3A,TMPRSS3,TMPRSS3,UBASH3A	-338,-8106,-8106,-338
chr12:4223697-4225352	chr12	+	4224126	4225388	True	NM_001759,NM_020367	chr12,chr12	+,-	CCND2,PARP11	157513,-241518
chr8:27184443-27185291	chr8	+	27184551	27185325	True	NM_173176,NM_173175,NM_004103,NM_171982	chr8,chr8,chr8,chr8	+,+,+,-	PTK2B,PTK2B,PTK2B,TRIM35	-1613,-1528,-4690,-15717
chr4:124596719-124598161	chr4	+	124596848	124598181	True	NM_198041,NR_027105	chr4,chr4	-,+	NUDT6,LOC285419	-752725,-22959
chr17:3870405-3870660	chr17	+	3870590	3870656	True	NM_174958,NM_144611,NM_174953,NM_174955,NM_174954,NM_174957,NM_174956,NM_005173	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,-,-,-,-,-,-	ATP2A3,CYB5D2,ATP2A3,ATP2A3,ATP2A3,ATP2A3,ATP2A3,ATP2A3	-2854,175805,-2854,-2854,-2854,-2854,-2854,-2854
chr17:73631040-73631710	chr17	+	73631205	73631759	True	NR_028439,NM_001162995,NM_004259	chr17,chr17,chr17	+,+,-	LOC643008,LOC643008,RECQL5	915,-1742,31556
chr22:25759137-25759599	chr22	+	25759141	25759231	True	NR_029395,NM_182492	chr22,chr22	+,-	IGLL3P,LRP5L	-44968,-617
chr17:60354135-60354395	chr17	+	60354324	60354406	True	NR_027486,NM_001144933	chr17,chr17	-,+	TBC1D3P2,EFCAB3	-1308,93172
chr3:197357779-197358169	chr3	+	197357804	197358206	True	NR_003266,NM_001011537	chr3,chr3	-,+	LOC220729,FYTTD1	-3052,118217
chr3:197357779-197358169	chr3	-	195381479	195381539	False	NM_001647,NR_003265	chr3,chr3	-,+	APOD,SDHAP2	-70403,3370
chr3:197357779-197358169	chr3	+	195720532	195720622	False	NR_034088,NR_003264	chr3,chr3	+,-	LOC401109,SDHAP1	148884,-3382
chr3:52868600-52869264	chr3	+	52868608	52869166	True	NM_002218,NM_001166449,NM_205853,NM_002217	chr3,chr3,chr3,chr3	-,-,-,+	ITIH4,ITIH4,MUSTN1,ITIH3	-3891,-3891,119,-39875
chr7:89980415-89982175	chr7	+	89980415	89982219	True	NM_006980,NM_001042717,NM_033107	chr7,chr7,chr7	-,+,+	MTERF,GTPBP10,GTPBP10	1527847,-4491,-4491
chr16:2185610-2185857	chr16	+	2185664	2185904	True	NM_001009944,NM_000296,NR_037467,NM_014353	chr16,chr16,chr16,chr16	-,-,-,+	PKD1,PKD1,MIR3180-5,RAB26	45,45,276,12746
chr16:2185610-2185857	chr16	+	18495636	18495686	False	NR_036142,NR_003569,NR_036141,NR_036144	chr16,chr16,chr16,chr16	-,+,-,-	MIR3180-2,ABCC6P1,MIR3180-1,MIR3180-3	488,86883,492,492
chr16:2185610-2185857	chr16	-	16404173	16404223	False	NR_036142,NR_036447,NR_036141,NM_001079528,NR_036144	chr16,chr16,chr16,chr16,chr16	+,+,+,-,+	MIR3180-2,PKD1P1,MIR3180-1,ABCC6,MIR3180-3	-488,7242,-492,-86845,-492
chr16:2185610-2185857	chr16	-	15005518	15005568	False	NR_036142,NR_023387,NR_036141,NR_036144	chr16,chr16,chr16,chr16	+,-,+,+	MIR3180-2,ABCC6P2,MIR3180-1,MIR3180-3	-488,-86959,-492,-492
chr16:2185610-2185857	chr16	+	15248395	15248445	False	NM_015027,NR_037466	chr16,chr16	+,-	PDXDC1,MIR3180-4	-179613,464
chr10:89620174-89620716	chr10	+	89620207	89620682	True	NM_000314,NM_001126049	chr10,chr10	+,-	PTEN,KLLN	2512,2562
chr18:3376334-3377160	chr18	+	3376388	3377210	True	NM_019856,NM_174886	chr18,chr18	-,+	MYOM1,TGIF1	-156282,34861
chr21:33241550-33242988	chr21	+	33241614	33242739	True	NM_020706,NM_014586	chr21,chr21	-,+	SCAF4,HUNK	-137183,2888
chr12:19301031-19302360	chr12	+	19301301	19302178	True	NM_019012,NM_033123	chr12,chr12	+,-	PLEKHA5,PLCZ1	-18726,-410383
chr2:119695124-119696379	chr2	+	119695215	119696410	True	NM_001426,NM_006770	chr2,chr2	-,+	EN1,MARCO	-89456,3334
chr11:72380724-72381927	chr11	+	72380747	72381742	True	NM_033388,NM_001146209,NM_002599	chr11,chr11,chr11	+,-,-	ATG16L2,PDE2A,PDE2A	143708,-639,3803
chr5:137477112-137478374	chr5	+	137477158	137478106	True	NM_003551,NM_005733	chr5,chr5	-,+	NME5,KIF20A	-2026,36310
chr3:157835555-157835836	chr3	+	157835595	157835671	True	NM_016625,NM_006884	chr3,chr3	+,-	RSRC1,SHOX2	-7765,-11643
chr16:28723059-28723287	chr16	+	28723065	28723331	True	NM_003752,NM_001099661,NM_001037808,NM_177536	chr16,chr16,chr16,chr16	+,+,+,-	EIF3C,EIF3CL,EIF3C,SULT1A1	-334,-331,-334,-88199
chr16:28723059-28723287	chr16	-	28414615	28414881	False	NM_003752,NM_018690,NM_001099661,NM_001037808	chr16,chr16,chr16,chr16	-,+,-,-	EIF3C,APOBR,EIF3CL,EIF3C	334,91111,331,334
chr1:85461643-85462230	chr1	+	85461653	85462271	True	NM_145172,NM_153259	chr1,chr1	+,-	WDR63,MCOLN2	65721,575
chr5:87981251-87981553	chr5	+	87981405	87981615	True	NR_024383,NM_022650,NR_015436	chr5,chr5,chr5	-,+,-	LOC645323,RASA1,LOC645323	-7143,-1416690,-785
chr3:169483808-169485445	chr3	+	169483875	169485433	True	NR_001566,NM_001185118,NR_033703,NR_033702,NM_018657,NM_032487,NM_001185119	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,+,+,+,-,+	TERC,MYNN,MYNN,MYNN,MYNN,ARPM1,MYNN	-1027,5419,5419,5419,5419,2300,6619
chr14:65291694-65292150	chr14	+	65291696	65292162	True	NM_001204063,NM_000347,NM_001024858	chr14,chr14,chr14	+,-,-	CHURC1,SPTB,SPTB	88916,-1830,-1830
chrX:48766918-48767436	chrX	+	48766920	48767460	True	NM_005660,NM_006875,NM_001167992,NM_001032289,NM_001042498	chrX,chrX,chrX,chrX,chrX	-,-,+,-,-	SLC35A2,PIM2,PQBP1,SLC35A2,SLC35A2	1507,9003,-11196,1523,1825
chr1:19578034-19578278	chr1	+	19578079	19578199	True	NM_016183,NM_015047	chr1,chr1	+,-	MRTO4,KIAA0090	-55,-33
chr1:67769168-67771108	chr1	+	67769704	67770928	True	NM_001018067,NM_001559	chr1,chr1	-,+	SERBP1,IL12RB2	125252,2118
chr11:113185559-113186238	chr11	+	113185787	113186262	True	NM_017868,NR_034101	chr11,chr11	+,-	TTC12,LOC100288346	-587,-41164
chr19:2153394-2153824	chr19	+	2153737	2153843	True	NM_001077523,NM_003938,NM_032482	chr19,chr19,chr19	-,-,+	AP3D1,AP3D1,DOT1L	-2181,-2181,10304
chr11:113643631-113644240	chr11	+	113643767	113643927	True	NM_001101389,NM_004724	chr11,chr11	+,-	CLDN25,ZW10	6590,548
chr17:18219248-18220608	chr17	+	18219364	18220508	True	NM_004618,NM_144775	chr17,chr17	-,+	TOP3A,SMCR8	-1043,-821
chr2:242091132-242092569	chr2	+	242091204	242092603	True	NM_015148,NM_002712	chr2,chr2	-,+	PASK,PPP1R7	-2326,-1353
chr10:89420884-89421478	chr10	+	89421035	89421499	True	NM_001015880,NM_004670,NM_032810	chr10,chr10,chr10	+,+,-	PAPSS2,PAPSS2,ATAD1	-1610,-1610,156468
chr12:13527860-13528164	chr12	+	13527869	13528197	True	NR_036555,NM_001423	chr12,chr12	-,+	C12orf36,EMP1	1532,-178318
chr7:99210301-99212203	chr7	+	99210536	99212216	True	NM_145111,NM_145115	chr7,chr7	-,+	FAM200A,ZNF498	-60779,2354
chr3:36897841-36898053	chr3	+	36897901	36898061	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	88537,136779
chr16:89724913-89725633	chr16	+	89724917	89725405	True	NM_002768,NM_001083314,NM_153025	chr16,chr16,chr16	-,-,+	CHMP1A,CHMP1A,C16orf55	-788,-788,-758
chr9:35401994-35403479	chr9	+	35401999	35403506	True	NM_001099951,NR_003582,NR_003581	chr9,chr9,chr9	-,+,+	FAM166B,ATP8B5P,ATP8B5P	160440,3245,3258
chr2:32286715-32288205	chr2	+	32286788	32287776	True	NM_199436,NM_032574,NM_014946	chr2,chr2,chr2	+,-,+	SPAST,DPY30,SPAST	903,-21944,903
chr11:70118348-70119103	chr11	+	70118384	70119091	True	NM_133266,NM_003626,NM_177423	chr11,chr11,chr11	-,+,+	SHANK2,PPFIA1,PPFIA1	388889,-1612,-1612
chr17:16389044-16389669	chr17	+	16389155	16389687	True	NR_003054,NM_207387,NM_001113567	chr17,chr17,chr17	+,-,-	SNORD65,C17orf76,C17orf76	-44666,5843,5843
chr6:17990960-17992262	chr6	+	17990986	17992066	True	NM_001105568,NM_153042,NM_022113,NM_001105566,NM_001105567	chr6,chr6,chr6,chr6,chr6	-,+,-,-,-	KIF13A,KDM1B,KIF13A,KIF13A,KIF13A	-3187,163552,-3187,-3187,-3187
chr5:11855235-11856024	chr5	+	11855323	11856040	True	NM_001332,NR_033383	chr5,chr5	-,+	CTNND2,TAG	48127,718928
chr12:93478827-93480443	chr12	+	93479011	93480413	True	NM_019094,NM_003566	chr12,chr12	+,-	NUDT4,EEA1	291287,-155904
chr1:161182149-161182986	chr1	+	161182153	161183034	True	NM_004106,NM_001643	chr1,chr1	+,-	FCER1G,APOA2	2052,10436
chr11:71640955-71642037	chr11	+	71641015	71641814	True	NR_024147,NR_029192,NR_024148,NM_018320	chr11,chr11,chr11,chr11	+,-,+,+	RNF121,LOC100133315,RNF121,RNF121	-1306,-1522,-1306,-1306
chr21:19254217-19255219	chr21	+	19254441	19254965	True	NM_001204175,NR_024354	chr21,chr21	+,-	CHODL,NCRNA00157	34691,3018
chr3:128710527-128711124	chr3	+	128710604	128711089	True	NM_020741,NM_024768	chr3,chr3	-,+	KIAA1257,CCDC48	1958,9382
chr19:8117022-8117669	chr19	+	8117029	8117655	True	NM_005624,NM_001419,NM_001201359	chr19,chr19,chr19	+,-,+	CCL25,ELAVL1,CCL25	-10,-46500,-10
chr6:72293787-72294000	chr6	+	72293824	72293892	True	NM_024576,NR_026807	chr6,chr6	+,-	OGFRL1,C6orf155	-295406,-163376
chr5:80255192-80255955	chr5	+	80255262	80255870	True	NM_006909,NM_000791	chr5,chr5	+,-	RASGRF2,DHFR	687,-304462
chr10:5566980-5567218	chr10	+	5567070	5567248	True	NM_017422,NM_005185	chr10,chr10	-,+	CALML5,CALML3	-25537,-197
chrX:40132237-40133293	chrX	+	40132275	40133280	True	NM_001123384,NM_005765	chrX,chrX	-,+	BCOR,ATP6AP2	-95693,306935
chr14:98638772-98640030	chr14	+	98639078	98639952	True	NR_015430,NM_182560	chr14,chr14	-,+	C14orf64,C14orf177	-194617,537997
chr20:61561759-61563073	chr20	+	61561861	61562947	True	NM_001193370,NM_033081,NM_017896,NM_001193369,NM_022105,NM_080797,NM_080796	chr20,chr20,chr20,chr20,chr20,chr20,chr20	-,-,+,-,-,-,-	DIDO1,DIDO1,C20orf11,DIDO1,DIDO1,DIDO1,DIDO1	-3958,6407,6493,-3958,6407,6407,-3958
chr7:37025145-37025491	chr7	+	37025267	37025533	True	NM_001039459,NM_130442,NM_018685	chr7,chr7,chr7	-,-,+	ELMO1,ELMO1,ANLN	-602,238,-595895
chr15:42500558-42501182	chr15	+	42500614	42501202	True	NM_198141,NR_030357,NM_015289	chr15,chr15,chr15	+,-,-	GANC,MIR627,VPS39	65163,-8750,-112
chrX:153028384-153029637	chrX	+	153028525	153029683	True	NM_001163257,NM_004135,NM_005393	chrX,chrX,chrX	+,-,+	PLXNB3,IDH3G,PLXNB3	-33,30334,-33
chr1:28969318-28969568	chr1	+	28969328	28969522	True	NM_001135218,NM_005644,NR_004407	chr1,chr1,chr1	-,-,+	TAF12,TAF12,RNU11	132,132,5589
chrX:149862521-149862908	chrX	+	149862521	149862925	True	NM_001184808,NM_003828	chrX,chrX	-,+	CD99L2,MTMR1	204414,-703
chr5:134184866-134185438	chr5	+	134184951	134185316	True	NM_152409,NM_002653,NM_001135586	chr5,chr5,chr5	+,-,+	C5orf24,PITX1,C5orf24	-3632,184698,-3344
chr14:100843940-100844665	chr14	+	100843948	100844498	True	NM_001161476,NM_173701,NM_024515,NM_004184,NM_213646,NM_213645	chr14,chr14,chr14,chr14,chr14,chr14	+,-,+,-,-,-	WDR25,WARS,WDR25,WARS,WARS,WARS	-1245,-1268,-1167,-2021,-2021,-1268
chr11:123909271-123910050	chr11	+	123909275	123910054	True	NM_001004464,NM_001004463	chr11,chr11	+,-	OR10G8,OR10G7	-8996,-15
chr7:158799399-158799732	chr7	+	158799442	158799706	True	NM_003382	chr7	-	VIPR2	137993
chr1:204184927-204186007	chr1	+	204184941	204186023	True	NM_005686,NM_198447	chr1,chr1	+,-	SOX13,GOLT1A	-142758,-1721
chr9:15514119-15515365	chr9	+	15514329	15515034	True	NM_173550,NM_021144,NM_001128217,NM_033222	chr9,chr9,chr9,chr9	+,-,-,-	C9orf93,PSIP1,PSIP1,PSIP1	38062,-4042,-3326,-3326
chr20:2675073-2675377	chr20	+	2675188	2675418	True	NM_174856,NM_001110514	chr20,chr20	-,+	IDH3B,EBF4	-30345,-1715
chr11:70245578-70245874	chr11	+	70245630	70245910	True	NM_133266,NM_138565,NM_005231,NM_001184740	chr11,chr11,chr11,chr11	-,+,+,+	SHANK2,CTTN,CTTN,CTTN	262063,-1069,-1069,-1069
chr3:72897760-72899207	chr3	+	72897809	72899187	True	NM_001080393,NM_018130	chr3,chr3	+,-	GXYLT2,SHQ1	38197,-211
chr22:17640525-17640810	chr22	+	17640575	17640825	True	NM_017829,NM_033070,NR_024482,NR_024483	chr22,chr22,chr22,chr22	-,-,+,+	CECR5,CECR5,CECR4,CECR4	5402,-406,-347,-347
chr11:58344538-58345191	chr11	+	58344652	58345210	True	NR_024091,NM_004811,NM_001143995,NM_001197051,NM_053023	chr11,chr11,chr11,chr11,chr11	+,-,-,+,+	ZFP91-CNTF,LPXN,LPXN,ZFP91,ZFP91	1376,-1262,479,1376,1376
chr10:70304441-70305065	chr10	+	70304473	70305115	True	NM_030625,NM_152707	chr10,chr10	+,-	TET1,SLC25A16	15001,-17193
chr17:43720306-43720896	chr17_ctg5_hap1	-	1146617	1146973	False	NR_026901,NR_026906,NR_026905	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	+,-,-	LOC644172,C17orf69,C17orf69	41465,4060,4060
chr17:43720306-43720896	chr17	+	43720339	43720695	True	NR_026901,NR_026906,NR_026905	chr17,chr17,chr17	-,+,+	LOC644172,C17orf69,C17orf69	-40591,-4060,-4060
chr1:149222444-149222771	chr1	+	149222728	149222788	True	NM_001024599,NR_027002	chr1,chr1	-,+	HIST2H2BF,LOC388692	176491,56687
chr9:133812659-133813788	chr9	+	133812731	133813573	True	NM_001145106,NM_032843,NM_006059	chr9,chr9,chr9	-,-,+	FIBCD1,FIBCD1,LAMC3	932,716,70930
chr7:30951102-30951430	chr7	+	30951122	30951376	True	NM_001185061,NM_001185060,NM_001185062,NM_001202481,NM_198098	chr7,chr7,chr7,chr7,chr7	+,+,+,-,+	AQP1,AQP1,AQP1,CRHR2,AQP1	9728,9538,9742,-211403,38
chr6:46797350-46797909	chr6	+	46797486	46797724	True	NM_001098518,NM_005588	chr6,chr6	-,+	GPR116,MEP1A	92040,-36450
chr7:73100348-73101813	chr7	+	73100473	73101442	True	NR_037776,NM_017528,NM_001202560,NM_032317	chr7,chr7,chr7,chr7	+,+,+,-	WBSCR22,WBSCR22,WBSCR22,DNAJC30	-2626,-2626,-2626,-2692
chr20:35977706-35977984	chr20	+	35977791	35978033	True	NM_198291,NM_021081,NM_005417	chr20,chr20,chr20	+,-,+	SRC,GHRH,SRC	-3285,-92492,-4754
chr9:130540223-130541466	chr9	+	130540773	130541467	True	NR_036055,NM_001261,NM_170600,NM_005489	chr9,chr9,chr9,chr9	+,+,-,-	MIR2861,CDK9,SH2D3C,SH2D3C	6729,6837,41,-7152
chr12:81111017-81111286	chr12	+	81111105	81111315	True	NM_002469,NM_005593,NR_030348	chr12,chr12,chr12	+,+,-	MYF6,MYF5,MIR617	-9748,-448,115143
chr16:88923615-88923865	chr16	+	88923639	88923901	True	NM_001080487,NM_000512,NM_016209	chr16,chr16,chr16	-,-,+	PABPN1L,GALNS,TRAPPC2L	9217,-265,-184
chr2:26781762-26783539	chr2	+	26781956	26783361	True	NM_001105519,NM_194248	chr2,chr2	+,-	C2orf70,OTOF	2119,-390
chr1:111997222-111998288	chr1	+	111997544	111998043	True	NM_001688,NM_024102	chr1,chr1	+,-	ATP5F1,WDR77	-5859,-5714
chr3:194408025-194408272	chr3	+	194408036	194408270	True	NM_018385,NM_153690	chr3,chr3	-,+	LSG1,FAM43A	-14830,-1465
chr13:28195782-28196229	chr13	+	28195992	28196164	True	NM_015972,NM_152705,NM_153371	chr13,chr13,chr13	+,+,-	POLR1D,POLR1D,LNX2	-14,-40,-1272
chr12:107488173-107489506	chr12	+	107488204	107489356	True	NM_004075,NM_152261	chr12,chr12	-,+	CRY1,C12orf23	-606,-138711
chr16:85783535-85783805	chr16	+	85783560	85783854	True	NR_031731,NM_001861,NM_206967	chr16,chr16,chr16	-,+,-	MIR1910,COX4I1,C16orf74	-8254,49318,885
chr9:85676966-85677404	chr9	+	85677005	85677327	True	NM_152573,NM_001001551	chr9,chr9	-,+	RASEF,C9orf103	766,560705
chr6:35996561-35998184	chr6	+	35996607	35997992	True	NM_052961,NM_001193476,NM_001315,NM_139014,NM_139013,NM_139012,NM_138718	chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,-,+,+,+,+,-	SLC26A8,SLC26A8,MAPK14,MAPK14,MAPK14,MAPK14,SLC26A8	-4194,-4302,-1213,-1213,-1213,-1213,-4330
chr1:47559249-47560253	chr1	+	47559471	47560125	True	NM_005764,NM_178134	chr1,chr1	-,+	PDZK1IP1,CYP4Z1	95696,-26363
chr1:47559249-47560253	chr1	-	47339354	47339411	False	NM_001099772,NR_002788	chr1,chr1	+,-	CYP4B1,CYP4Z2P	-74742,26793
chr2:31029111-31030273	chr2	+	31029203	31030143	True	NM_144575,NM_001002257	chr2,chr2	-,+	CAPN13,LCLAT1	218,-359118
chr5:173167600-173168192	chr5	+	173167617	173168197	True	NM_030627,NM_138369	chr5,chr5	+,-	CPEB4,BOD1	147133,-123951
chr6:33714162-33714684	chr6	+	33714272	33714656	True	NM_001142883,NM_054111,NM_002224	chr6,chr6,chr6	-,-,+	IP6K3,IP6K3,ITPR3	156,156,-125167
chr20:3776272-3776584	chr20	+	3776344	3776590	True	NM_021873,NM_021872,NM_001810,NM_004358	chr20,chr20,chr20,chr20	+,+,-,+	CDC25B,CDC25B,CENPB,CDC25B	6,6,-9007,6
chr19:6360195-6360548	chr19	+	6360203	6360351	True	NM_006012,NM_004158	chr19,chr19	+,-	CLPP,PSPN	1111,15559
chr7:1203262-1204265	chr7	+	1203829	1204305	True	NM_182491,NM_001080461	chr7,chr7	-,+	ZFAND2A,UNCX	-3974,68348
chr21:40678938-40680213	chr21	+	40679139	40680138	True	NM_004627,NM_001007246,NM_018963,NR_033800,NM_033656	chr21,chr21,chr21,chr21,chr21	+,-,-,-,-	WRB,BRWD1,BRWD1,NCRNA00257,BRWD1	72074,5468,5468,6800,5468
chr9:98785907-98786208	chr9	+	98785996	98786259	True	NR_033838,NR_024129	chr9,chr9	+,-	LOC158435,NCRNA00092	41861,-1959
chr5:143584261-143584799	chr5	+	143584260	143584692	True	NM_020768,NM_030799	chr5,chr5	+,-	KCTD16,YIPF5	-33886,-33982
chr6:10550562-10551817	chr6	+	10550637	10551550	True	NR_027793,NM_001491	chr6,chr6	-,+	C6orf218,GCNT2	-115582,4398
chr16:67842495-67843092	chr16	+	67842689	67842782	True	NM_018430,NM_020850	chr16,chr16	+,-	TSNAXIP1,RANBP10	-1739,-2134
chr14:50101776-50102073	chr14	+	50101944	50102048	True	NM_002408,NM_018139,NM_001083908	chr14,chr14,chr14	+,-,-	MGAT2,C14orf104,C14orf104	-14506,4,4
chr15:90321442-90323047	chr15	+	90321585	90322939	True	NM_001039958,NM_018670	chr15,chr15	+,-	MESP2,MESP1	-2048,-27045
chr4:49308240-49308931	chr4	+	49308593	49308815	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-320379,-399778
chr2:219694794-219695016	chr2	+	219694851	219694979	True	NM_017431,NM_006522	chr2,chr2	-,+	PRKAG3,WNT6	1583,29566
chr21:35739200-35739401	chr21	+	35739369	35739441	True	NM_001127670,NM_058182,NM_172201	chr21,chr21,chr21	-,+,+	KCNE1,FAM165B,KCNE2	88672,8307,-3097
chr4:71553171-71553669	chr4	+	71553377	71553549	True	NM_144646,NM_020368	chr4,chr4	-,+	IGJ,UTP3	-21029,646
chr22:20002956-20003525	chr22	+	20002996	20003417	True	NM_152906,NM_001670	chr22,chr22	+,-	C22orf25,ARVCF	5213,950
chr15:78857550-78857779	chr15	+	78857549	78857819	True	NM_001166694,NM_000745	chr15,chr15	-,+	CHRNA3,CHRNA5	55868,42
chr3:125575230-125575857	chr3	+	125575684	125575788	True	NR_024250,NR_031687	chr3,chr3	+,-	LOC100125556,MIR548I1	59655,-66289
chr4:106068424-106068913	chr4	+	106068523	106068951	True	NM_001127208,NM_006903,NM_017628	chr4,chr4,chr4	+,-,+	TET2,PPA2,TET2	-732,326326,-1542
chr12:54425017-54425226	chr12	+	54425068	54425238	True	NM_004503,NM_018953,NR_030753,NR_026658	chr12,chr12,chr12,chr12	+,+,+,-	HOXC6,HOXC5,MIR615,LOC100240735	-2925,1593,2495,50419
chr4:146007408-146009122	chr4	+	146007564	146008856	True	NM_001040876,NM_014885	chr4,chr4	+,-	ABCE1,ANAPC10	10299,10562
chr19:50829956-50831144	chr19	+	50830008	50831085	True	NM_004977,NM_007121	chr19,chr19	-,+	KCNC3,NR1H2	1599,48599
chr1:53904930-53905292	chr1	+	53904977	53905255	True	NM_033067,NR_002314	chr1,chr1	+,-	DMRTB1,FLJ40434	19816,488
chr1:207282279-207282554	chr1	+	207282351	207282579	True	NM_018566,NM_000715	chr1,chr1	-,+	YOD1,C4BPA	-57929,-4796
chr10:104260248-104261781	chr10	+	104260974	104261744	True	NM_001178133,NM_005736,NM_016169	chr10,chr10,chr10	+,-,+	SUFU,ACTR1A,SUFU	1974,819,1974
chr1:45952585-45953677	chr1	+	45952883	45953600	True	NM_007170,NM_015506	chr1,chr1	-,+	TESK2,MMACHC	3295,12255
chr5:65019564-65020719	chr5	+	65019694	65020610	True	NM_020726,NM_019072	chr5,chr5	+,-	NLN,SGTB	-1723,-1753
chr5:127855474-127856293	chr5	+	127855633	127856327	True	NM_001046,NM_001999	chr5,chr5	+,-	SLC12A2,FBN2	-436210,17460
chr17:34506250-34507402	chr17	+	34506276	34507424	True	NM_001001417,NM_001001435	chr17,chr17	-,+	TBC1D3B,CCL4L1	-2288,31043
chr17:34506250-34507402	chr17	-	36280534	36281678	False	NM_032258,NR_024178,NM_001123391	chr17,chr17,chr17	+,-,+	TBC1D3F,LOC284100,TBC1D3	2281,-36171,2281
chr17:34506250-34507402	chr17	+	34594320	34595376	False	NM_001001435,NM_001001418	chr17,chr17	+,-	CCL4L1,TBC1D3C	44657,-2293
chr17:34506250-34507402	chr17	+	34810384	34811524	False	NM_001001418,NM_004773,NM_001040282	chr17,chr17,chr17	-,+,-	TBC1D3C,ZNHIT3,TBC1D3G	-2293,30948,-2281
chr17:34506250-34507402	chr17	+	34759329	34760473	False	NM_001123392,NM_004773	chr17,chr17	-,+	TBC1D3H,ZNHIT3	-2279,81999
chr2:33739674-33740403	chr2	+	33739894	33740402	True	NM_015376,NM_015475	chr2,chr2	+,-	RASGRP3,FAM98A	-1017,84010
chr1:162617937-162618289	chr1	+	162617980	162618339	True	NM_178550,NM_006182	chr1,chr1	-,+	C1orf110,DDR2	220317,-15803
chr10:120839351-120839649	chr10	+	120839377	120839611	True	NM_207009,NM_003750	chr10,chr10	+,-	FAM45A,EIF3A	23999,773
chr8:33340022-33340684	chr8	+	33340344	33340732	True	NM_032664,NM_032509	chr8,chr8	-,+	FUT10,MAK16	-9680,1952
chr5:35623339-35624897	chr5	+	35623465	35624614	True	NM_024867,NM_001042625,NM_144722	chr5,chr5,chr5	+,-,+	SPEF2,CAPSL,SPEF2	-5534,314182,-5534
chr3:16309635-16310131	chr3	+	16309678	16310172	True	NM_206831,NM_001047434,NM_138381	chr3,chr3,chr3	-,-,+	DPH3,DPH3,OXNAD1	-3182,-3182,-3064
chr5:160974131-160974558	chr5	+	160974401	160974575	True	NM_000811,NM_021911,NM_000813	chr5,chr5,chr5	+,-,-	GABRA6,GABRB2,GABRB2	138082,605,605
chr10:124745193-124745659	chr10	+	124745212	124745417	True	NM_153336,NM_022466	chr10,chr10	+,-	PSTK,IKZF5	-5713,22949
chr8:37377509-37377883	chr8	+	37377519	37377845	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	175455,227769
chr19:16438115-16438472	chr19	+	16438115	16438480	True	NM_021235,NM_016270	chr19,chr19	-,+	EPS15L1,KLF2	144332,-2515
chr17:63132856-63133135	chr17	+	63132906	63133135	True	NM_006572,NM_003835,NM_001165933,NM_001081955	chr17,chr17,chr17,chr17	-,+,+,+	GNA13,RGS9,RGS9,RGS9	-79986,320,320,320
chr18:72118598-72120481	chr18	+	72118706	72120472	True	NM_001044369,NM_018235	chr18,chr18	-,+	FAM69C,CNDP2	4081,43027
chr4:100442930-100443426	chr4	+	100442941	100443464	True	NM_152292,NM_032149	chr4,chr4	-,+	RG9MTD2,C4orf17	41412,-10840
chr1:89533556-89534690	chr1	+	89533688	89534662	True	NM_002053,NM_198460	chr1,chr1	-,+	GBP1,GBP6	-2645,294773
chr2:25262217-25262795	chr2	+	25262229	25262609	True	NM_016544,NM_014971	chr2,chr2	-,+	DNAJC27,EFR3B	-67266,2363
chr3:46244877-46245805	chr3	+	46244881	46245801	True	NM_001295,NM_001164680	chr3,chr3	-,+	CCR1,CCR3	4081,38070
chr21:26978813-26979634	chr21	+	26978895	26979577	True	NM_017446,NM_021219,NM_080794	chr21,chr21,chr21	-,+,-	MRPL39,JAM2,MRPL39	274,32011,274
chr10:38690214-38690547	chr10	+	38690511	38690575	True	NR_027269,NR_024497	chr10,chr10	-,+	SEPT7L,LOC399744	1255,26498
chr17:27715294-27715814	chr17	+	27715405	27715658	True	NM_025142,NM_020791,NM_020772	chr17,chr17,chr17	+,+,-	TAOK1,TAOK1,NUFIP2	2284,2284,-94239
chr2:225862242-225863623	chr2	+	225862315	225863533	True	NM_014689,NM_020864	chr2,chr2	-,+	DOCK10,KIAA1486	43847,402068
chr16:22386427-22387380	chr16	+	22386493	22387089	True	NM_001802,NR_027154	chr16,chr16	-,+	CDR2,LOC641298	-555,61239
chr17:36453441-36453784	chr17	+	36453482	36453761	True	NR_036750,NM_032351	chr17,chr17	-,+	LOC440434,MRPL45	-40226,-541
chr17:36453441-36453784	chr17	-	45569212	45569491	False	NR_033934,NM_006310	chr17,chr17	-,+	MRPL45P2,NPEPPS	551,38952
chr17:29719811-29720132	chr17	+	29719888	29720130	True	NM_014210,NM_032932	chr17,chr17	-,+	EVI2A,RAB11FIP4	-71121,-1297
chr17:54891054-54891659	chr17	+	54891058	54891655	True	NM_001085430,NM_003647	chr17,chr17	-,+	C17orf67,DGKE	1645,19804
chr9:97135721-97136047	chr9	+	97135866	97135931	True	NM_017561,NM_032558	chr9,chr9	-,+	FAM22F,HIATL1	-44940,901
chr9:97135721-97136047	chr9	-	99776770	99776835	False	NM_001045477,NR_002894	chr9,chr9	+,-	FAM22G,HIATL2	-85538,-908
chr12:122296444-122296782	chr12	+	122296450	122296764	True	NM_002813,NM_002150	chr12,chr12	+,-	PSMD9,HPD	29881,55
chr10:127587251-127587720	chr10	+	127587250	127587471	True	NM_018180,NM_145235	chr10,chr10	-,+	DHX32,FANK1	-17366,-2202
chr17:60498725-60499255	chr7	+	128114498	128114558	False	NM_183243,NM_018396	chr7,chr7	-,+	IMPDH1,METTL2B	-64462,2224
chr17:60498725-60499255	chr17	+	60498818	60499016	True	NR_027486,NM_181725	chr17,chr17	-,+	TBC1D3P2,METTL2A	-145802,2229
chr9:32989960-32990261	chr9	+	32989964	32990153	True	NM_001539,NM_001195249	chr9,chr9	+,-	DNAJA1,APTX	35055,11482
chr19:46998925-46999442	chr19	+	46999145	46999417	True	NM_005184,NM_020709	chr19,chr19	+,-	CALM3,PNMAL2	105094,24
chrX:101969343-101971117	chrX	+	101969374	101970946	True	NM_030639,NM_001184875,NM_001184874,NM_001184876,NM_001004051,NM_138437,NM_001142528,NM_021992,NM_001142525,NM_001142524,NM_001142527,NM_001142526	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,+,+,-,+,+,+,+	BHLHB9,GPRASP2,GPRASP2,GPRASP2,GPRASP2,GPRASP2,BHLHB9,TMSB15A,BHLHB9,BHLHB9,BHLHB9,BHLHB9	4695,-2321,-2321,-2321,-2321,-2321,4695,-197675,4695,4695,4695,4695
chr10:97491002-97491299	chr10	+	97491100	97491320	True	NM_001143973,NM_001098175	chr10,chr10	-,+	TCTN3,ENTPD1	-37200,-19615
chr21:35826355-35828170	chr21	+	35826517	35828201	True	NM_001127670,NM_001127669,NM_001127668,NM_058182	chr21,chr21,chr21,chr21	-,-,-,+	KCNE1,KCNE1,KCNE1,FAM165B	-88,3751,3751,-78820
chr20:30004868-30005783	chr20	+	30005276	30005495	True	NR_002577,NM_001171832	chr20,chr20	+,-	DEFB122,DEFB121	3746,-4635
chrY:20893023-20894755	chrY	+	20893352	20894731	True	NR_001530,NM_001001877,NR_002159	chrY,chrY,chrY	+,-,+	TTTY9A,HSFY2,TTTY9B	-1647,40920,-1647
chrY:20893023-20894755	chrY	-	20749443	20750822	False	NR_001530,NR_002159,NR_003510	chrY,chrY,chrY	-,-,+	TTTY9A,TTTY9B,HSFY1	1647,1647,-40917
chr13:25337688-25338232	chr13	+	25337793	25338149	True	NM_018451,NM_001184993,NM_031277	chr13,chr13,chr13	-,+,+	CENPJ,RNF17,RNF17	158986,151,151
chr19:11269385-11269829	chr19	+	11269670	11269730	True	NM_001195803,NM_182513	chr19,chr19	+,-	LDLR,SPC24	-69683,-3186
chr3:47825979-47827473	chr3	+	47826119	47826927	True	NM_014966,NM_003074	chr3,chr3	+,-	DHX30,SMARCC1	17471,-2714
chr11:66313914-66314206	chr11	+	66313936	66314120	True	NM_001104,NM_207340	chr11,chr11	+,-	ACTN3,ZDHHC24	270,-265
chr5:112093436-112094114	chr5	+	112093459	112093815	True	NM_001127510,NM_005669	chr5,chr5	+,-	APC,REEP5	-19967,164280
chr15:21285737-21286049	chr15	+	21285856	21286092	True	NR_027411,NR_028506	chr15,chr15	+,-	GOLGA8C,NF1P1	-518233,-151231
chr15:21285737-21286049	chr15	+	20278667	20278903	False	NR_036432,NR_027411	chr15,chr15	-,+	HERC2P3,GOLGA8C	432580,488770
chrX:24481880-24483035	chrX	+	24482098	24483006	True	NM_001136233,NM_005391,NM_001142386	chrX,chrX,chrX	-,+,+	FAM48B2,PDK3,PDK3	-150666,337,337
chr1:171851206-171852702	chr1	+	171851752	171852607	True	NR_033704,NM_015569	chr1,chr1	-,+	VAMP4,DNM3	-140373,-41192
chr4:89444063-89444367	chr4	+	89444071	89444416	True	NM_016323,NM_032906,NM_001042616	chr4,chr4,chr4	+,-,-	HERC5,PIGY,PIGY	-65854,589,589
chr20:57556796-57558350	chr20	+	57556935	57558159	True	NM_001336,NM_198976	chr20,chr20	-,+	CTSZ,TH1L	24201,-675
chr2:242812013-242812215	chr2	+	242812012	242812256	True	NM_173821,NM_005018	chr2,chr2	+,-	C2orf85,PDCD1	-177,-10954
chr1:151965804-151966029	chr1	+	151965851	151965941	True	NR_024237,NM_002966	chr1,chr1	+,-	LOC100132111,S100A10	-154957,823
chr3:142722692-142724650	chr3	+	142723014	142724669	True	NM_001080415,NR_034032	chr3,chr3	+,-	U2SURP,LOC100289361	-2700,-2705
chr6:89825647-89825927	chr6	+	89825646	89825926	True	NM_001010853,NM_080743	chr6,chr6	+,-	PM20D2,SRSF12	29842,1924
chr4:40514655-40515825	chr4	+	40514826	40515694	True	NM_019027,NM_017581	chr4,chr4	-,+	RBM47,CHRNA9	2353,-177415
chrX:147279537-147279771	chrX	+	147279594	147279724	True	NM_152578,NR_024503	chrX,chrX	+,-	FMR1NB,FMR1-AS1	-216796,-275918
chr15:80264472-80264704	chr15	+	80264644	80264753	True	NM_001114735,NR_028330,NM_004049	chr15,chr15,chr15	-,+,-	BCL2A1,C15orf37,BCL2A1	-1001,-49585,-1001
chr5:128448890-128450518	chr5	+	128448963	128450545	True	NM_016048,NM_001999	chr5,chr5	+,-	ISOC1,FBN2	-18583,-575228
chr8:357671-357995	chr2	+	243031818	243031869	True	NM_005018	chr2	-	PDCD1	-230760
chr6:43443016-43443437	chr6	+	43443178	43443466	True	NM_001146020,NM_206539,NM_080604,NR_027394,NM_001146019,NM_001146018,NM_001146016	chr6,chr6,chr6,chr6,chr6,chr6,chr6	+,-,+,+,+,+,+	TJAP1,DLK2,TJAP1,TJAP1,TJAP1,TJAP1,TJAP1	1794,-19392,1794,1794,1794,1794,1794
chr7:95225738-95226033	chr7	+	95225774	95225958	True	NM_016116,NM_002612	chr7,chr7	+,-	ASB4,PDK4	-110612,17
chr6:117997255-117997461	chr6	+	117997277	117997403	True	NM_020399,NM_138459	chr6,chr6	-,+	GOPC,NUS1	-73572,-711
chr1:24308965-24309564	chr1	+	24308980	24309467	True	NM_006625,NR_034035,NM_054016,NM_017761,NM_001191009,NM_001191006,NM_001191007,NM_001191005	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,-,-,-	SRSF10,SRSF10,SRSF10,PNRC2,SRSF10,SRSF10,SRSF10,SRSF10	-2027,-2027,-2027,-22730,-2027,-2027,-2027,-2027
chr11:2009653-2009897	chr11	+	2009695	2009903	True	NR_024471,NR_002196,NR_030533,NM_021134	chr11,chr11,chr11,chr11	-,-,-,+	LOC100133545,H19,MIR675,MRPL23	1297,9212,8208,-41244
chr2:10833379-10834213	chr2	+	10833843	10834123	True	NM_001039362,NM_024894	chr2,chr2	+,-	ATP6V1C2,NOL10	27651,-3731
chr12:122150342-122150552	chr12	+	122150399	122150575	True	NM_173855,NM_001080825	chr12,chr12	-,+	MORN3,TMEM120B	-42839,82
chr2:74676993-74678835	chr2	+	74677062	74678844	True	NM_001015056,NM_001015055,NM_033046,NM_031288,NM_012477,NR_037849	chr2,chr2,chr2,chr2,chr2,chr2	-,-,-,+,+,+	RTKN,RTKN,RTKN,INO80B,WBP1,INO80B-WBP1	-9352,-8002,-9352,3305,6682,3305
chr15:41137508-41138419	chr15	+	41137640	41138396	True	NM_017726,NM_003710,NM_181642,NM_001032367	chr15,chr15,chr15,chr15	-,+,+,+	PPP1R14D,SPINT1,SPINT1,SPINT1	-16733,-1445,-1445,-1048
chr10:96708900-96709624	chr10	+	96708969	96709660	True	NM_000771,NM_000770	chr10,chr10	+,-	CYP2C9,CYP2C8	-10609,119645
chr11:61655824-61656342	chr11	+	61655888	61656334	True	NM_004265,NM_021727	chr11,chr11	+,-	FADS2,FADS3	-60226,2722
chr17:30189236-30190763	chr17	+	30189430	30190684	True	NM_018405,NM_015355	chr17,chr17	-,+	C17orf79,SUZ12	-3104,73359
chr6:24772831-24773667	chr6	+	24772830	24773433	True	NM_030939,NM_015895	chr6,chr6	-,+	C6orf62,GMNN	-53427,1730
chr18:12883754-12884023	chr18	+	12883793	12884060	True	NM_001013437,NM_080423,NM_080422,NM_002828	chr18,chr18,chr18,chr18	+,-,-,-	SEH1L,PTPN2,PTPN2,PTPN2	63922,324,324,324
chr2:170348600-170349190	chr2	+	170348599	170349241	True	NM_152384,NM_024622	chr2,chr2	+,-	BBS5,FASTKD1	-12646,81239
chr5:99410214-99410972	chr5	+	99410308	99410822	True	NM_198507,NR_027503	chr5,chr5	+,-	FAM174A,LOC100133050	460301,313192
chr5:99410214-99410972	chr5	-	37444363	37444413	False	NM_153485,NM_018034	chr5,chr5	-,+	NUP155,WDR70	-73166,-65002
chr5:99410214-99410972	chr5	-	98835760	98836239	False	NM_001270,NR_036530	chr5,chr5	-,+	CHD1,LOC100289230	-573522,-570979
chr5:85579306-85580806	chr5	+	85579360	85580625	True	NR_003719,NR_036243	chr5,chr5	+,-	NBPF22P,MIR4280	-1149,830197
chr11:66102750-66103079	chr11	+	66102840	66103124	True	NM_001024957,NM_015399,NM_004292,NM_153266	chr11,chr11,chr11,chr11	-,-,-,+	BRMS1,BRMS1,RIN1,TMEM151A	9508,9508,926,-43518
chr5:3594198-3594421	chr5	+	3594267	3594411	True	NR_033898,NM_024337	chr5,chr5	-,+	LOC285577,IRX1	-58059,1756
chr8:81785818-81786029	chr8	+	81785829	81785901	True	NM_001033723,NM_023929	chr8,chr8	-,+	ZNF704,ZBTB10	1165,-387432
chr7:5321038-5321651	chr7	+	5321113	5321511	True	NM_153247,NR_034163,NM_001040661	chr7,chr7,chr7	+,-,+	SLC29A4,ZNF890P,SLC29A4	1049,-136936,1049
chr12:5155136-5156284	chr12	+	5155195	5156228	True	NM_006422,NM_002234	chr12,chr12	-,+	AKAP3,KCNA5	-400852,-2163
chr9:103095070-103095369	chr9	+	103095113	103095289	True	NM_001161584,NM_001198807	chr9,chr9	-,+	TEX10,C9orf30	19616,94205
chr12:53299787-53301737	chr12	+	53300056	53301730	True	NM_199187,NM_002273	chr12,chr12	+,-	KRT18,KRT8	40924,-1188
chr19:54748561-54749326	chr19	+	54748889	54749095	True	NM_001013,NM_024318	chr19,chr19	+,-	RPS9,LILRA6	-44221,-2165
chr19:18450866-18451190	chr19	+	18450926	18451201	True	NM_017712,NM_012321	chr19,chr19	+,-	PGPEP1,LSM4	206,-16925
chr10:50118157-50119066	chr10	+	50118216	50119095	True	NM_020945,NM_001006939	chr10,chr10	+,-	WDFY4,LRRC18	-224756,3235
chr20:54937491-54938095	chr20	+	54937502	54937919	True	NM_003600,NM_080821	chr20,chr20	-,+	AURKA,C20orf108	29482,-3578
chr4:187158343-187159435	chr4	+	187158653	187159471	True	NR_033900,NM_000892	chr4,chr4	-,+	LOC285441,KLKB1	262791,-10032
chr17:61699473-61699729	chr17	+	61699481	61699613	True	NM_002401,NM_203351,NM_030576	chr17,chr17,chr17	+,+,-	MAP3K3,MAP3K3,LIMD2	187,187,77956
chr8:139928111-139929264	chr8	+	139928242	139929277	True	NM_017444,NM_152888	chr8,chr8	+,-	CHRAC1,COL22A1	1592123,-2006
chr11:7982279-7982561	chr11	+	7982310	7982600	True	NM_003754,NM_176821	chr11,chr11	+,-	EIF3F,NLRP10	26266,2509
chr5:177025271-177025551	chr5	+	177025387	177025565	True	NR_024019,NM_017510,NM_007255	chr5,chr5,chr5	-,+,+	FAM193B,TMED9,B4GALT7	-43839,-6240,1553
chr14:61189555-61189773	chr14	+	61189596	61189664	True	NM_017420,NM_001177963	chr14,chr14	-,+	SIX4,MNAT1	1238,11794
chr16:11373872-11375059	chr16	+	11374002	11375081	True	NM_021247,NM_152308,NM_002761,NM_002762	chr16,chr16,chr16,chr16	-,+,-,-	PRM3,C16orf75,PRM1,PRM2	-6550,64229,161,-3665
chr12:53497957-53499211	chr12	+	53497960	53499128	True	NM_002178,NM_003578,NM_032840	chr12,chr12,chr12	+,+,-	IGFBP6,SOAT2,SPRYD3	-6575,-737,-24756
chr19:13229854-13230905	chr19	+	13229999	13230817	True	NM_017722,NM_001136035,NM_001142554,NM_052876	chr19,chr19,chr19,chr19	-,-,-,+	TRMT1,TRMT1,TRMT1,NACC1	-2536,-2436,-2536,-941
chr18:43409276-43409570	chr18	+	43409278	43409528	True	NM_213602,NM_020964	chr18,chr18	+,-	SIGLEC15,EPG5	-3784,137827
chr3:4535337-4535736	chr3	+	4535640	4535782	True	NM_001099952,NM_001168272,NM_002222,NM_182760	chr3,chr3,chr3,chr3	+,+,+,-	ITPR1,ITPR1,ITPR1,SUMF1	-660,-660,-660,-26674
chr2:110361109-110361458	chr2	+	110361165	110361388	True	NM_023016,NM_144710	chr2,chr2	+,-	ANKRD57,SEPT10	10522,10446
chr17:34263112-34263779	chr17	+	34263136	34263828	True	NM_001163124,NM_001163125,NM_001034836,NM_001163120,NM_001163121,NM_001163122,NM_001163130,NM_020426,NM_145654,NM_003487,NR_027999,NR_027998,NR_027997,NR_027996,NR_028000,NM_001199951	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,-,-,-,-,+,-,-,-,-,-,-	RDM1,RDM1,RDM1,RDM1,RDM1,RDM1,RDM1,LYZL6,RDM1,TAF15,RDM1,RDM1,RDM1,RDM1,RDM1,LYZL6	-5833,-5833,-5356,-5356,-5356,-5833,-5833,2782,-5356,-126699,-5833,-5356,-5356,-5356,-5833,6925
chr2:178225255-178226144	chr2	+	178225267	178226048	True	NM_003659,NR_026966	chr2,chr2	+,-	AGPS,LOC100130691	31422,31429
chrX:6144835-6145079	chrX	+	6144869	6145115	True	NM_020742,NM_000351,NM_181332	chrX,chrX,chrX	-,+,-	NLGN4X,STS,NLGN4X	823,992356,1641
chr4:26322700-26322902	chr4	+	26322699	26322939	True	NM_203284,NM_015874,NM_203283,NM_005349,NM_000730	chr4,chr4,chr4,chr4,chr4	+,+,+,+,-	RBPJ,RBPJ,RBPJ,RBPJ,CCKAR	-302,-302,-1418,-1418,169153
chr15:42699283-42699820	chr15	+	42699308	42699508	True	NM_022473,NM_173090,NM_173088,NM_173089	chr15,chr15,chr15,chr15	-,+,+,+	ZFP106,CAPN3,CAPN3,CAPN3	50272,-2382,-4771,-2382
chr6:160388154-160388688	chr6	+	160388155	160388526	True	NM_000876,NM_030752	chr6,chr6	+,-	IGF2R,TCP1	1604,-177420
chr9:136283556-136283806	chr9	+	136283556	136283664	True	NR_024514,NM_139025,NM_139026,NM_139027,NM_020385	chr9,chr9,chr9,chr9,chr9	+,+,+,+,-	ADAMTS13,ADAMTS13,ADAMTS13,ADAMTS13,REXO4	-4148,3455,3455,3455,-392
chr10:111288126-111289947	chr10	+	111288173	111289093	True	NM_019903,NM_001167604	chr10,chr10	+,-	ADD3,XPNPEP1	476632,394274
chr12:4553280-4554421	chr12	+	4553289	4554201	True	NM_020996,NM_001130862	chr12,chr12	-,+	FGF6,RAD51AP1	629,93748
chr14:61752087-61753348	chr14	+	61752086	61753236	True	NM_001017970,NM_006255	chr14,chr14	-,+	TMEM30B,PRKCH	-3556,35278
chr17:34397084-34398328	chr17	+	34397251	34398029	True	NM_002988,NM_002983	chr17,chr17	+,-	CCL18,CCL3	-5660,19527
chr6:43597365-43597649	chr6	+	43597369	43597629	True	NM_014628,NM_001003690,NM_019096	chr6,chr6,chr6	+,+,-	MAD2L1BP,MAD2L1BP,GTPBP2	5947,-141,-433
chr6:26104317-26104663	chr6	+	26104316	26104668	True	NM_003542,NM_005323	chr6,chr6	+,-	HIST1H4C,HIST1H1T	-191,3747
chr3:149764448-149765068	chr3	+	149764521	149765100	True	NM_053024,NR_036538	chr3,chr3	-,+	PFN2,LOC646903	-75780,-75506
chr5:135072460-135073018	chr5	+	135072664	135072738	True	NM_145282,NR_027127	chr5,chr5	+,-	SLC25A48,LOC340074	97626,-83040
chr18:54325426-54326240	chr18	+	54325648	54325807	True	NM_052834,NM_015285,NR_024546	chr18,chr18,chr18	+,+,-	WDR7,WDR7,TXNL1	-7090,-7090,-19728
chr6:86389110-86389760	chr6	+	86389120	86389788	True	NM_002526,NR_003044,NR_002743,NR_003038	chr6,chr6,chr6,chr6	+,-,-,-	NT5E,SNORD50B,SNORD50A,SNHG5	-229869,-1743,-2034,-669
chr6:100912616-100912820	chr6	+	100912676	100912775	True	NM_021620,NM_005068	chr6,chr6	+,-	PRDM13,SIM1	-858077,-1125
chr5:53744709-53746615	chr5	+	53744888	53746643	True	NM_006308,NM_019087	chr5,chr5	+,-	HSPB3,ARL15	4787,-138485
chrX:75394497-75395375	chrX	+	75394601	75395418	True	NM_016500,NM_138703	chrX,chrX	+,-	CXorf26,MAGEE2	-1888,-389522
chr12:112855874-112856205	chr12	+	112856160	112856224	True	NM_002834,NM_000970,NM_001024662	chr12,chr12,chr12	+,-,-	PTPN11,RPL6,RPL6	311,-8717,-8717
chr14:24783066-24784957	chr14	+	24783270	24784705	True	NM_001164692,NM_019839,NM_181657,NM_001143919,NM_014430	chr14,chr14,chr14,chr14,chr14	+,+,+,+,-	LTB4R2,LTB4R2,LTB4R,LTB4R,CIDEB	-3964,-3964,-1008,-2616,-2694
chr18:19192525-19192816	chr18	+	19192584	19192780	True	NM_006938,NM_052911	chr18,chr18	+,-	SNRPD1,ESCO1	-375,-11891
chr12:56391315-56391839	chr12	+	56391358	56391822	True	NM_006928,NM_000456,NM_001032386,NM_001032387	chr12,chr12,chr12,chr12	-,+,+,+	PMEL,SUOX,SUOX,SUOX	-30862,-366,-366,-366
chr12:7916926-7917886	chr12	+	7917749	7917869	True	NM_203503,NM_001145465	chr12,chr12	-,+	CLEC4C,NANOGNB	-15680,12
chr19:10196650-10196868	chr19	+	10196655	10196889	True	NM_018381,NM_031917	chr19,chr19	+,-	C19orf66,ANGPTL6	-24,16586
chr22:38403218-38404101	chr22	+	38403237	38403913	True	NM_006941,NM_001039583	chr22,chr22	-,+	SOX10,PICK1	-22698,49348
chr4:185938800-185939328	chr4	+	185938805	185939369	True	NM_001029887,NR_037510	chr4,chr4	+,-	HELT,MIR3945	713,-166541
chr11:5713300-5714670	chr11	+	5713301	5714565	True	NM_006074,NM_001199573,NM_033092,NM_033034,NM_033093	chr11,chr11,chr11,chr11,chr11	+,+,-,-,-	TRIM22,TRIM22,TRIM5,TRIM5,TRIM5	-2540,-2540,-6962,-6962,-6962
chr15:73386590-73387404	chr15	+	73386589	73387275	True	NM_002499,NM_005477	chr15,chr15	+,-	NEO1,HCN4	-41819,274380
chr17:32483428-32484116	chr17	+	32483430	32484132	True	NM_002982,NM_001094	chr17,chr17	+,-	CCL2,ACCN1	98163,61
chr11:7063771-7065131	chr11	+	7063927	7065163	True	NM_013249,NM_176822	chr11,chr11	-,+	ZNF214,NLRP14	-22341,-22278
chr19:4970931-4971485	chr19	+	4970998	4971428	True	NM_015015,NM_001080523	chr19,chr19	+,-	KDM4B,ARRDC5	-1925,-68119
chr2:96991934-96992771	chr2	+	96992093	96992771	True	NM_015341,NM_001163523,NM_001163524,NM_178495,NM_001008949,NM_014014	chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,+,-	NCAPH,ITPRIPL1,ITPRIPL1,ITPRIPL1,ITPRIPL1,SNRNP200	8712,-1075,-199,-209,-1082,-20786
chr3:56717556-56717767	chr3	+	56717589	56717789	True	NR_024460,NM_001112736	chr3,chr3	+,-	CCDC66,C3orf63	-126456,-454
chr1:113248526-113248845	chr1	+	113248533	113248873	True	NM_001042678,NM_001042679,NM_005167,NM_001004440,NM_175744	chr1,chr1,chr1,chr1,chr1	-,-,-,+,-	RHOC,RHOC,PPM1J,FAM19A3,RHOC	1202,855,9127,14315,1202
chr21:33104133-33104345	chr21	+	33104230	33104308	True	NM_020706,NM_000454,NM_001145445,NM_001145444	chr21,chr21,chr21,chr21	-,+,-,-	SCAF4,SOD1,SCAF4,SCAF4	173,-72346,173,173
chr20:1294247-1295306	chr20	+	1294401	1294832	True	NM_014723,NM_015685	chr20,chr20	+,-	SNPH,SDCBP2	-47493,-84
chr1:111432035-111432245	chr1	+	111432211	111432300	True	NM_000560,NM_001006945	chr1,chr1	+,-	CD53,C1orf103	-16549,74323
chr15:50978974-50979484	chr15	+	50979164	50979499	True	NM_017672,NM_007347	chr15,chr15	-,+	TRPM7,AP4E1	-152,221446
chr9:70916269-70917485	chr9	+	70917041	70917384	True	NR_015423,NM_199135	chr9,chr9	-,+	LOC572558,FOXD4L3	55423,398
chr9:70916269-70917485	chr9	-	69202095	69202438	False	NM_001085476,NM_001098805	chr9,chr9	-,+	FOXD4L6,ANKRD20A4	109,179542
chr11:100565276-100566125	chr11	+	100565346	100566049	True	NM_001202474,NM_152432	chr11,chr11	-,+	PGR,ARHGAP42	433802,-6990
chr5:471656-472249	chr5	+	471780	472101	True	NM_007277,NR_024158	chr5,chr5	+,-	EXOC3,LOC25845	-28497,1038
chr3:49757671-49758060	chr3	+	49757839	49758019	True	NM_013334,NM_198722,NM_021971,NM_022064	chr3,chr3,chr3,chr3	-,-,-,+	GMPPB,AMIGO3,GMPPB,RNF123	3415,-601,3415,-30900
chrX:15508031-15509305	chrX	+	15508462	15509200	True	NR_037859,NM_003662,NM_001018109,NM_203281	chrX,chrX,chrX,chrX	-,-,-,+	PIR-FIGF,PIR,PIR,BMX	283,2562,2562,9699
chr1:12676043-12676614	chr1	+	12676080	12676653	True	NM_004753,NM_001013630	chr1,chr1	-,+	DHRS3,AADACL4	1217,27912
chr3:2933598-2934703	chr3	+	2933606	2934750	True	NM_000564,NM_182916	chr3,chr3	-,+	IL5RA,TRNT1	217368,233849
chr22:19435610-19435838	chr22	+	19435620	19435856	True	NM_001166242,NM_173793,NM_003776	chr22,chr22,chr22	-,-,+	C22orf39,C22orf39,MRPL40	29,29,-15635
chr19:56985874-56986690	chr19	+	56985941	56986718	True	NR_036521,NR_036522,NM_022103,NR_030740	chr19,chr19,chr19,chr19	+,+,-,-	LOC100128252,LOC100128252,ZNF667,ZNF667	2524,2774,2102,2102
chr19:14530444-14531159	chr19	+	14530470	14531193	True	NM_001204057,NM_005804,NM_002741	chr19,chr19,chr19	-,-,+	DDX39A,DDX39A,PKN1	-564,-275,12972
chr15:60692981-60694297	chr15	+	60693043	60694281	True	NM_012182,NM_001002858,NM_004039,NM_001002857,NM_001136015	chr15,chr15,chr15,chr15,chr15	+,-,-,-,-	FOXB1,ANXA2,ANXA2,ANXA2,ANXA2	-396679,-2858,-2858,-2858,-2858
chr2:228572270-228573169	chr2	+	228572379	228573174	True	NM_001130046,NM_025243	chr2,chr2	+,-	CCL20,SLC19A3	105383,9621
chr2:68692817-68694291	chr2	+	68692842	68694340	True	NM_173545,NM_001024680	chr2,chr2	+,-	APLF,FBXO48	350,100
chr20:1185939-1186551	chr20	+	1186064	1186491	True	NM_018354,NM_001009612	chr20,chr20	-,+	C20orf46,C20orf202	-20947,-2019
chr17:42249504-42250390	chr17	+	42249574	42250329	True	NM_178542,NM_080863	chr17,chr17	-,+	C17orf65,ASB16	13804,-1551
chr1:48303720-48305458	chr1	+	48303863	48305432	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	157181,382924
chr15:35375380-35376001	chr12	-	7948329	7948545	False	NM_024865,NM_203503	chr12,chr12	+,-	NANOG,CLEC4C	-6393,-46260
chr15:35375380-35376001	chr15	+	35375512	35375850	True	NM_014106,NR_003144	chr15,chr15	-,+	ZNF770,LOC723972	-95015,153676
chr16:2041634-2042177	chr16	+	2041739	2042177	True	NM_144603,NM_004209,NM_005262	chr16,chr16,chr16	-,+,+	NOXO1,SYNGR3,GFER	-10299,-1844,-7640
chr8:75224642-75226291	chr8	+	75224859	75226257	True	NM_018972,NM_020647	chr8,chr8	+,-	GDAP1,JPH1	36360,7356
chr2:91751249-91751458	chr2	+	91751277	91751507	True	NR_003503,NR_027238	chr2,chr2	+,-	GGT8P,LOC654342	211860,96518
chr7:100256601-100258041	chr7	+	100257193	100257599	True	NM_005273,NM_016188	chr7,chr7	+,-	GNB2,ACTL6B	13763,-3109
chr1:6664067-6665367	chr1	+	6664154	6665293	True	NM_014851,NM_153812	chr1,chr1	-,+	KLHL21,PHF13	-1225,8462
chr17:75277727-75277934	chr17	+	75277775	75277963	True	NM_001113492,NM_001113491,NR_036200	chr17,chr17,chr17	+,+,-	SEPT9,SEPT9,MIR4316	6009,-334,115223
chr14:95080539-95081695	chr14	+	95080904	95081709	True	NM_001085,NM_173850	chr14,chr14	+,-	SERPINA3,SERPINA12	-2241,-96723
chr19:55791948-55792164	chr19	+	55792045	55792181	True	NM_032430,NM_012267,NM_001130106	chr19,chr19,chr19	+,-,-	BRSK1,HSPBP1,HSPBP1	3352,-294,-294
chr1:22968264-22968537	chr1	+	22968271	22968358	True	NR_036214,NM_172369,NM_015991,NM_001114101	chr1,chr1,chr1,chr1	-,+,+,+	MIR4253,C1QC,C1QA,C1QC	221412,1759,-5204,1759
chr7:99072139-99072909	chr7	+	99072242	99072668	True	NM_213603,NM_001198879,NM_001003714,NM_001039178,NM_001003713,NM_001013258,NM_004889	chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,-,-,-,-,+,-	ZNF789,ATP5J2-PTCD1,ATP5J2,ATP5J2,ATP5J2,ZNF789,ATP5J2	-1778,-8418,-8418,-8418,-8418,-1778,-8418
chr9:100616281-100616548	chr9	+	100616350	100616576	True	NM_004473,NM_016481	chr9,chr9	+,-	FOXE1,C9orf156	-864,68326
chrX:153799216-153800873	chrX	+	153799235	153800816	True	NM_001042351,NR_027401,NR_027402	chrX,chrX,chrX	-,+,+	G6PD,NCRNA00204,NCRNA00204B	-23448,193,193
chrX:153799216-153800873	chrX	-	153860123	153861691	False	NR_027401,NM_139250,NR_027402	chrX,chrX,chrX	-,+,-	NCRNA00204,CTAG1A,NCRNA00204B	-193,-46756,-193
chr19:407816-408034	chr19	+	407894	408052	True	NM_001136263,NM_130760	chr19,chr19	-,+	C2CD4C,MADCAM1	1168,88437
chr7:155326741-155327243	chr7	+	155326762	155327263	True	NM_001103176,NM_001427	chr7,chr7	-,+	CNPY1,EN2	-223,-75989
chr17:1945542-1945909	chr17	+	1945634	1945928	True	NR_029674,NR_029625,NM_080822	chr17,chr17,chr17	-,-,+	MIR132,MIR212,OVCA2	7424,7796,-408
chr17:55166958-55168926	chr17	+	55167112	55168458	True	NM_004645,NM_003488	chr17,chr17	-,+	COIL,AKAP1	-128701,-4610
chr19:5456034-5456363	chr19	+	5456038	5456398	True	NM_181710,NR_027064	chr19,chr19	+,-	ZNRF4,PLAC2	-663,111657
chr4:123801560-123803368	chr4	+	123802868	123803419	True	NM_007083,NM_145207	chr4,chr4	-,+	NUDT6,SPATA5	40397,40805
chr11:35547531-35548210	chr11	+	35547697	35548257	True	NM_015430,NM_014344,NM_001001991	chr11,chr11,chr11	-,+,-	PAMR1,FJX1,PAMR1	-521,91477,-521
chr17:61957854-61958310	chr17	+	61958132	61958226	True	NM_020991,NM_022645,NM_022644,NM_022557,NM_022556,NR_002947,NM_002059,NM_022558	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,+,-,-	CSH2,CSH2,CSH2,GH2,GH2,TCAM1P,GH2,GH2	-7043,-7043,-7043,1047,1047,-23807,1047,1047
chr2:170681484-170682025	chr2	+	170681566	170681867	True	NM_172070,NM_014168	chr2,chr2	+,-	UBR3,METTL5	2150,-213
chrX:55478103-55479046	chrX	+	55478145	55479095	True	NM_014061,NM_201286	chrX,chrX	+,-	MAGEH1,USP51	-136,36586
chr10:118502945-118504567	chr10	+	118503024	118504490	True	NM_025015,NM_005396	chr10,chr10	-,+	HSPA12A,PNLIPRP2	-939,-122610
chr17:6460049-6460265	chr17	+	6460161	6460221	True	NM_001165966,NM_031220,NM_032731	chr17,chr17,chr17	-,-,+	PITPNM3,PITPNM3,TXNDC17	-284,-284,84000
chr12:7865659-7866680	chr12	+	7866007	7866439	True	NM_199286,NM_020634	chr12,chr12	+,-	DPPA3,GDF3	-1979,-17647
chr3:39238738-39239568	chr3	+	39238748	39239279	True	NM_145755,NM_001198621,NM_194293	chr3,chr3,chr3	+,-,-	TTC21A,XIRP1,XIRP1	-89647,-4663,-4671
chr3:149470343-149471035	chr3	+	149470342	149470892	True	NM_007282,NM_016094	chr3,chr3	+,-	RNF13,COMMD2	59582,-56
chr6:143935281-143935582	chr6	+	143935364	143935626	True	NM_001100166,NR_027113,NM_014721	chr6,chr6,chr6	+,-,+	PHACTR2,LOC285740,PHACTR2	-6110,-44888,-6110
chr17:44625732-44625984	chr17_ctg5_hap1	+	1482580	1482856	False	NR_002940,NM_016632	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LRRC37A4,ARL17A	-1254,31078
chr17:44625732-44625984	chr17_ctg5_hap1	-	204715	204991	False	NM_001113738,NR_027782	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	ARL17A,PLEKHM1	-9045,-21501
chr17:44625732-44625984	chr17_ctg5_hap1	-	422635	422911	False	NM_001039083,NR_002940	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	ARL17B,LRRC37A4	-31074,1254
chr17:44625732-44625984	chr17	+	44625735	44626011	True	NM_001006607,NM_016632	chr17,chr17	+,-	LRRC37A2,ARL17A	-35710,31127
chr17:44625732-44625984	chr17	+	44407873	44408149	False	NM_001103154,NM_014834	chr17,chr17	-,+	ARL17B,LRRC37A	31035,-35427
chr1:116916162-116916414	chr1	+	116916262	116916332	True	NM_001160234,NM_000701,NM_001160233,NR_024126	chr1,chr1,chr1,chr1	+,+,+,-	ATP1A1,ATP1A1,ATP1A1,ATP1A1OS	9659,-518,156,44899
chr1:1851315-1852221	chr1	+	1851403	1852177	True	NM_138705,NM_178545	chr1,chr1	+,-	CALML6,TMEM52	-5188,-663
chr10:71390939-71392652	chr10	+	71391080	71392522	True	NM_020999,NM_145306	chr10,chr10	-,+	NEUROG3,C10orf35	-57870,-1128
chr11:1651826-1652696	chr11	+	1652073	1652713	True	NM_001012709,NM_001001480	chr11,chr11	-,+	KRTAP5-4,KRTAP5-5	-8705,-1091
chr13:97882124-97882406	chr13	+	97882123	97882275	True	NM_144778,NM_080818,NM_207304	chr13,chr13,chr13	+,-,+	MBNL2,OXGR1,MBNL2	-7603,-235519,-7603
chr1:220375235-220376004	chr1	+	220375600	220375961	True	NM_018060,NR_002994,NR_031705	chr1,chr1,chr1	+,-,-	IARS2,SNORA36B,MIR664	-108207,-1582,-1639
chr1:153285572-153286204	chr1	+	153285589	153286258	True	NM_052891,NM_002965	chr1,chr1	-,+	PGLYRP3,S100A9	-2395,44071
chr6:33546429-33546808	chr6	+	33546485	33546842	True	NR_028361,NM_001188	chr6,chr6	+,-	GGNBP1,BAK1	4633,1278
chr6:10523196-10523513	chr6	+	10523248	10523375	True	NM_145649,NR_027793	chr6,chr6	+,-	GCNT2,C6orf218	-1731,-88193
chr1:16345291-16345567	chr1	+	16345291	16345583	True	NM_014424,NM_004070,NM_001042704	chr1,chr1,chr1	-,+,+	HSPB7,CLCNKA,CLCNKA	-6,2902,2902
chr2:135208909-135209615	chr2	+	135208945	135209655	True	NM_030923,NR_024275	chr2,chr2	-,+	TMEM163,LOC151162	266966,-2036
chr16:88753057-88753384	chr16	+	88753076	88753382	True	NM_001012759,NM_178310	chr16,chr16	+,-	CTU2,SNAI3	19508,-194
chr1:27114806-27115766	chr1	+	27114966	27115782	True	NM_001202554,NM_018066,NM_017837	chr1,chr1,chr1	+,-,+	PIGV,GPN2,PIGV	-338,101137,-563
chr14:92588708-92589092	chr14	+	92588750	92589038	True	NM_004545,NM_017437	chr14,chr14	-,+	NDUFB1,CPSF2	-597,-503
chr6:108282080-108282374	chr6	+	108282262	108282331	True	NM_007214,NM_003269	chr6,chr6	-,+	SEC63,NR2E1	-2780,204883
chr13:113633377-113633740	chr13	+	113633423	113633695	True	NM_024979,NR_034002	chr13,chr13	+,-	MCF2L,MCF2L-AS1	-41,-10471
chr3:25468046-25468322	chr3	+	25468050	25468366	True	NM_016152,NM_000965,NM_001068	chr3,chr3,chr3	+,+,-	RARB,RARB,TOP2B	1387,1467,237480
chr3:32148420-32149137	chr3	+	32148560	32149174	True	NM_017784,NM_015141	chr3,chr3	-,+	OSBPL10,GPD1L	-125218,-608
chr1:171640690-171642502	chr1	+	171640709	171642242	True	NM_001007239,NM_000261	chr1,chr1	+,-	METTL13,MYOC	108518,-18936
chr19:12204561-12205063	chr19	+	12204560	12205028	True	NM_001080404,NR_027049	chr19,chr19	-,+	ZNF878,ZNF788	-37433,-1541
chrX:75391054-75392507	chrX	+	75391513	75392533	True	NM_016500,NM_138703	chrX,chrX	+,-	CXorf26,MAGEE2	237,-386434
chrX:52685140-52686343	chrX	+	52685140	52686226	True	NR_027250,NM_173358	chrX,chrX	+,-	SSX8,SSX7	-33206,-1190
chrX:52685140-52686343	chrX	+	48168358	48168408	False	NM_021014,NM_005635	chrX,chrX	-,+	SSX3,SSX1	47784,-53612
chr1:228295333-228295537	chr1	+	228295353	228295561	True	NM_181456,NM_181454,NM_181455,NM_181441,NR_037415,NM_181465,NM_181464,NM_024319,NM_181463,NM_181462	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,+,-,-,-,-,-	MRPL55,MRPL55,MRPL55,MRPL55,MIR3620,MRPL55,MRPL55,C1orf35,MRPL55,MRPL55	1502,1502,1502,1502,-10440,1502,1502,-4331,1502,1502
chr22:25400767-25401237	chr22	+	25400928	25401043	True	NM_001001663,NM_001145206	chr22,chr22	-,+	TMEM211,KIAA1671	-65614,22897
chr19:6136261-6136899	chr19	+	6136726	6136946	True	NM_134433,NM_030924	chr19,chr19	-,+	RFX2,ACSBG2	-26062,-1078
chrX:7065947-7066246	chrX	+	7066052	7066128	True	NM_012080,NM_001135565,NM_000351,NM_001178136,NM_001178135	chrX,chrX,chrX,chrX,chrX	-,-,+,-,-	HDHD1,HDHD1,STS,HDHD1,HDHD1	153,153,71343,153,153
chr8:54935803-54936521	chr8	+	54935897	54936199	True	NM_201437,NM_014175,NM_006756	chr8,chr8,chr8	-,+,-	TCEA1,MRPL15,TCEA1	-889,111581,-889
chr2:220406541-220406751	chr2	+	220406581	220406743	True	NR_036082,NM_001005209,NM_001195731,NM_024536	chr2,chr2,chr2,chr2	-,+,-,-	MIR3132,TMEM198,CHPF,CHPF	7176,2001,1126,1794
chr3:46906903-46907962	chr3	+	46906980	46907960	True	NM_000316,NM_000258	chr3,chr3	+,-	PTH1R,MYL3	11275,-2007
chr10:99967591-99968066	chr10	+	99967838	99968123	True	NM_014472,NM_032211	chr10,chr10	+,-	C10orf28,LOXL4	-73508,59943
chr2:85107730-85108024	chr2	+	85107808	85108038	True	NM_021103,NM_001080824	chr2,chr2	+,-	TMSB10,C2orf89	24724,264
chr5:61719680-61720057	chr5	+	61719707	61719855	True	NM_014473,NM_001134779	chr5,chr5	-,+	DIMT1L,IPO11	-19979,-5055
chr1:209825784-209826232	chr1	+	209825930	209826251	True	NM_001127641,NM_001017402,NM_015714,NM_000228	chr1,chr1,chr1,chr1	-,-,+,-	LAMB3,LAMB3,G0S2,LAMB3	-256,-1251,22418,-110
chr17:78120250-78120490	chr17	+	78120269	78120339	True	NM_024110,NM_014740	chr17,chr17	+,-	CARD14,EIF4A3	31941,693
chr1:150977851-150978969	chr1	+	150978145	150978941	True	NM_001040217,NM_021222,NM_001163258,NM_001163259,NM_018379,NM_001163260	chr1,chr1,chr1,chr1,chr1,chr1	-,+,-,-,-,-	FAM63A,PRUNE,FAM63A,FAM63A,FAM63A,FAM63A	494,2031,1963,382,1963,382
chrX:17873505-17874620	chrX	+	17873598	17874389	True	NM_006746,NM_001172739,NM_001172732,NR_033349,NR_033348,NM_021785,NM_001172743	chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,-,-,-,-,-,-	SCML1,RAI2,RAI2,RAI2,RAI2,RAI2,RAI2	-118057,5119,5119,4609,4609,5119,5119
chr20:43160755-43161151	chr20	+	43160803	43161149	True	NM_007066,NM_006811,NM_181805,NM_181804	chr20,chr20,chr20,chr20	+,-,+,+	PKIG,SERINC3,PKIG,PKIG	-424,-10077,-424,-424
chr17:7119189-7119652	chr17	+	7119303	7119499	True	NM_001365,NR_029896,NM_001128827,NM_000018,NM_001033859	chr17,chr17,chr17,chr17,chr17	-,-,-,+,+	DLG4,MIR324,DLG4,ACADVL,ACADVL	3920,7249,1479,3653,3653
chr2:231858070-231858842	chr2	+	231858179	231858841	True	NR_033879,NM_139073	chr2,chr2	-,+	LOC348761,SPATA3	1956,1997
chr2:219127168-219127407	chr2	+	219127167	219127321	True	NM_015488,NM_001077191,NM_001087,NM_170699,NM_001077194,NM_001077399	chr2,chr2,chr2,chr2,chr2,chr2	+,+,-,+,+,+	PNKD,GPBAR1,AAMP,GPBAR1,GPBAR1,PNKD	7793,-1480,7622,-1480,-1480,7793
chr7:1128137-1129439	chr7	+	1128211	1129434	True	NM_001098201,NM_001134395,NM_001505,NM_001039966	chr7,chr7,chr7,chr7	+,-,+,+	GPER,C7orf50,GPER,GPER	-539,48518,-1819,-1819
chr3:128902594-128902924	chr3	+	128902669	128902965	True	NM_001127195,NM_001127194,NM_001127196,NM_001127193,NM_001127192,NM_016128,NM_003418	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,-,+,-	CNBP,CNBP,CNBP,CNBP,CNBP,COPG,CNBP	61,61,61,61,61,65487,61
chr1:61549634-61549864	chr1	+	61549713	61549915	True	NM_001145511,NM_001145512,NM_032027,NM_005595,NM_001134673	chr1,chr1,chr1,chr1,chr1	+,+,-,+,+	NFIA,NFIA,TM2D1,NFIA,NFIA	-6831,-2243,641233,-1797,-1797
chr11:45941833-45943128	chr11	+	45941995	45943087	True	NM_152312,NM_004813,NM_057174	chr11,chr11,chr11	+,-,-	GYLTL1B,PEX16,PEX16	108,-2321,-2321
chr10:116440427-116442157	chr10	+	116440528	116442076	True	NM_001003408,NM_020940,NM_001003407	chr10,chr10,chr10	-,+,-	ABLIM1,FAM160B1,ABLIM1	2388,139426,2388
chr1:45275994-45276611	chr1	+	45276064	45276614	True	NM_001013632,NM_001136537	chr1,chr1	-,+	TCTEX1D4,BTBD19	-3107,-1961
chr2:170219509-170219993	chr2	+	170219528	170220014	True	NM_152384,NM_004525	chr2,chr2	+,-	BBS5,LRP2	115991,-406
chr16:82083516-82084311	chr16	+	82083600	82084308	True	NM_145168,NM_002153	chr16,chr16	-,+	SDR42E1,HSD17B2	-38507,-14793
chr4:153290914-153292643	chr4	+	153291055	153292447	True	NR_033797,NM_001013415	chr4,chr4	+,-	DKFZP434I0714,FBXW7	164968,11280
chrX:135929747-135930458	chrX	+	135929761	135930375	True	NR_002735,NM_000074	chrX,chrX	-,+	SNORD61,CD40LG	31105,-199489
chr5:140215375-140215654	chr5	+	140215413	140215597	True	NM_031849,NM_002109,NM_018909,NM_031848,NM_031856,NM_018910,NM_018911,NM_031852	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,-,+,+,+,+,+,+	PCDHA6,HARS,PCDHA6,PCDHA6,PCDHA8,PCDHA7,PCDHA8,PCDHA7	-7814,-144442,-7814,-7814,5309,-1495,5309,-1495
chr5:140215375-140215654	chr5	+	140256502	140256820	False	NM_031865,NM_031864,NM_031861,NM_002109,NM_018903,NM_018902,NM_018904	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,-,+,+,+	PCDHA13,PCDHA12,PCDHA11,HARS,PCDHA12,PCDHA11,PCDHA13	5033,-1890,-8990,-185531,-1890,-8990,5033
chr4:87556971-87558509	chr4	+	87557203	87557723	True	NM_080685,NM_002753	chr4,chr4	+,-	PTPN13,MAPK10	-41794,-182920
chr19:58611547-58612390	chr19	+	58611609	58612417	True	NM_001145543,NM_007134,NM_001145544,NM_023926	chr19,chr19,chr19,chr19	-,+,-,-	ZSCAN18,ZNF135,ZSCAN18,ZSCAN18	-1879,-41061,-1879,-1879
chr6:57179793-57181133	chr6	+	57179891	57180861	True	NM_016277,NM_000947	chr6,chr6	-,+	RAB23,PRIM2	-92813,1560
chr1:43832324-43832732	chr1	+	43832323	43832613	True	NM_022821,NM_001255	chr1,chr1	-,+	ELOVL1,CDC20	1136,-7748
chr3:184525386-184525929	chr3	+	184525487	184525959	True	NM_001009921,NM_022149,NM_015303	chr3,chr3,chr3	+,-,+	VPS8,MAGEF1,VPS8	3971,-95651,3971
chr17:64959205-64959741	chr17	+	64959230	64959610	True	NM_014877,NM_014405	chr17,chr17	-,+	HELZ,CACNG4	281759,1369
chr20:46130691-46130891	chr20	+	46130702	46130778	True	NM_006534,NM_001174088,NM_001174087,NM_181659,NM_183048	chr20,chr20,chr20,chr20,chr20	+,+,+,+,-	NCOA3,NCOA3,NCOA3,NCOA3,ZMYND8	-152,-152,-152,-152,-145228
chr1:68691513-68692801	chr1	+	68691584	68692794	True	NM_024911,NM_001002292,NM_001193334,NM_001924	chr1,chr1,chr1,chr1	-,-,-,+	WLS,WLS,WLS,GADD45A	5550,5495,5495,-540789
chr16:14394279-14395226	chr16	+	14394320	14395150	True	NR_029854,NM_001134477,NR_030177	chr16,chr16,chr16	+,-,+	MIR365-1,PARN,MIR193B	7991,329020,2673
chr21:34709147-34709800	chr21	+	34709341	34709825	True	NM_000629,NM_006134	chr21,chr21	+,-	IFNAR1,TMEM50B	-12179,142506
chr17:31200007-31201660	chr17	+	31200041	31201602	True	NM_001033504,NM_015194	chr17,chr17	+,-	TMEM98,MYO1D	53325,2350
chr11:6220006-6220603	chr11	+	6220043	6220515	True	NM_001005178,NM_173525,NM_001004052	chr11,chr11,chr11	+,+,-	OR52W1,C11orf42,OR52B2	-62,6282,-28487
chr1:53480701-53481474	chr1	+	53480715	53481516	True	NM_018281,NM_001007100,NM_001007099,NM_001007250	chr1,chr1,chr1,chr1	-,+,+,+	ECHDC2,SCP2,SCP2,SCP2	-93269,-169,-169,-169
chr2:231576010-231576559	chr2	+	231576014	231576402	True	NM_001130850,NM_005683,NM_001130849,NM_016289	chr2,chr2,chr2,chr2	+,-,+,+	CAB39,GPR55,CAB39,CAB39	1860,213589,1860,1154
chr10:99792661-99793163	chr10	+	99792703	99793193	True	NM_014472,NM_018058	chr10,chr10	+,-	C10orf28,CRTAC1	101187,-2118
chr1:67776498-67777869	chr1	+	67776761	67777841	True	NM_001018067,NM_001559	chr1,chr1	-,+	SERBP1,IL12RB2	118332,-3766
chr18:56809750-56810089	chr18	+	56809766	56810029	True	NM_033280,NM_013435	chr18,chr18	+,-	SEC11C,RAX	-2703,130655
chrX:97931609-97932701	chrX	+	97931718	97932738	True	NR_024608,NM_013347	chrX,chrX	-,+	LOC442459,RPA4	1262154,-1792869
chr1:160849116-160849815	chr1	+	160849128	160849682	True	NM_002348,NM_017625	chr1,chr1	+,-	LY9,ITLN1	-83251,5328
chrX:4464575-4465843	chrX	+	4464992	4465880	True	NR_034031,NM_004042	chrX,chrX	-,+	LOC389906,ARSF	-703057,-1480205
chr2:170435022-170436645	chr2	+	170435217	170436402	True	NM_004792,NM_024622	chr2,chr2	+,-	PPIG,FASTKD1	4447,-4793
chr1:110884219-110884633	chr1	+	110884257	110884607	True	NM_001201545,NR_036595,NM_022768	chr1,chr1,chr1	+,-,+	RBM15,LOC440600,RBM15	-2363,-2464,-2363
chr11:15723514-15724687	chr11	+	15723557	15724725	True	NM_001145819,NM_001042536	chr11,chr11	-,+	SOX6,INSC	699738,-587124
chrX:100182454-100183247	chrX	+	100182675	100183152	True	NM_212559,NM_001012990	chrX,chrX	-,+	XKRX,ARL13A	810,41544
chr21:44297377-44297874	chr21	+	44297707	44297879	True	NM_018669,NM_033661,NM_001001503	chr21,chr21,chr21	-,-,+	WDR4,WDR4,NDUFV3	1849,1849,15498
chr15:25460327-25460943	chr15	+	25460345	25460839	True	NR_003315,NR_003314,NR_003313,NR_003495,NR_003496,NR_003497,NR_003307,NR_022010,NR_003358,NR_003344,NR_003345,NR_003351,NM_130838,NR_003342,NR_003343,NR_003303,NR_003312	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,+,+,+,-,+,+,+,+	SNORD115-23,SNORD115-22,SNORD115-21,SNORD115-24,HBII-52-27,HBII-52-28,SNORD115-15,PAR4,SNORD115-43,SNORD115-29,SNORD115-30,SNORD115-36,UBE3A,SNORD115-25,SNORD115-26,SNORD115-11,SNORD115-20	-3453,-5331,-8987,-1590,4810,6661,-8987,-3557,7553,7553,9510,7553,189864,-37,2924,7553,-8987
chr2:241621540-241622137	chr2	+	241621557	241622163	True	NM_198998,NM_001102467	chr2,chr2	+,-	AQP12A,AQP12B	9098,204
chr2:241621540-241622137	chr2	-	241631820	241632028	False	NM_198998,NM_001102467	chr2,chr2	+,-	AQP12A,AQP12B	-609,-9503
chr16:1536672-1537211	chr16	+	1536765	1536973	True	NM_001013658,NM_016111	chr16,chr16	-,+	PTX4,TELO2	1545,6378
chr14:65411065-65411857	chr14	+	65411138	65411613	True	NM_001202559,NM_002083	chr14,chr14	+,-	CHURC1-FNTB,GPX2	-30110,-1607
chr1:109290086-109290919	chr1	+	109290085	109290425	True	NM_144584,NM_007269	chr1,chr1	-,+	HENMT1,STXBP3	-85937,-851
chr22:39027734-39029287	chr22	+	39027773	39029305	True	NM_001002880,NM_001013647	chr22,chr22	+,-	CBY1,LOC646851	23352,23379
chr11:124610009-124610552	chr11	+	124610065	124610529	True	NM_001126181,NM_006176,NM_014312	chr11,chr11,chr11	+,+,-	NRGN,NRGN,VSIG2	-287,-287,11630
chr17:7240103-7241875	chr17	+	7240637	7241489	True	NM_001005408,NM_032442,NM_014716	chr17,chr17,chr17	-,-,+	NEURL4,NEURL4,ACAP1	-7999,-7999,-840
chr3:183871822-183872259	chr3	+	183872066	183872298	True	NM_005787,NM_004423	chr3,chr3	-,+	ALG3,DVL3	94511,985
chr1:39407767-39408283	chr1	+	39407772	39408078	True	NM_001136275,NM_017821	chr1,chr1	+,-	AKIRIN1,RHBDL2	48837,-316
chr17:80693798-80694131	chr17	+	80693803	80694137	True	NM_022158,NM_006822	chr17,chr17	+,-	FN3K,RAB40B	-402,-37205
chr22:46063213-46064168	chr22	+	46063271	46063658	True	NM_001167621,NM_148674,NM_013236	chr22,chr22,chr22	+,-,+	ATXN10,SMC1B,ATXN10	4019,-253771,4019
chr10:38644086-38645041	chr10	+	38644248	38644973	True	NR_027269,NR_003086	chr10,chr10	-,+	SEPT7L,HSD17B7P2	46857,334
chr13:25669745-25670022	chr13	+	25669988	25670058	True	NM_152704,NM_030979	chr13,chr13	-,+	FAM123A,PABPC3	75849,217
chr6:28183821-28184428	chr6	+	28183918	28184456	True	NR_002936,NM_001199479,NM_006299,NM_001199480	chr6,chr6,chr6,chr6	-,+,+,+	LOC222699,ZNF193,ZNF193,ZNF193	2301,8572,8572,8572
chr11:64950691-64950896	chr11	+	64950761	64950891	True	NM_172230,NM_001198868,NM_001198870,NM_001198869,NM_005186	chr11,chr11,chr11,chr11,chr11	-,+,+,+,+	SYVN1,CAPN1,CAPN1,CAPN1,CAPN1	-48758,-2126,-1508,-1662,-1508
chr11:63332867-63333791	chr11	+	63333334	63333694	True	NM_017878,NM_004585	chr11,chr11	-,+	HRASLS2,RARRES3	-2479,-29112
chr5:10364400-10365074	chr5	+	10364416	10364850	True	NM_005885,NM_138809	chr5,chr5	+,-	MARCH6,CMBL	-10639,-56248
chr2:219248317-219248732	chr2	+	219248485	219248779	True	NM_022152,NM_000578	chr2,chr2	-,+	TMBIM1,SLC11A1	-91205,-1784
chr19:1400551-1400849	chr19	+	1400593	1400841	True	NM_138924,NM_018959,NM_170711,NM_000156	chr19,chr19,chr19,chr19	-,+,+,-	GAMT,DAZAP1,DAZAP1,GAMT	761,6742,6742,761
chr12:120740819-120741137	chr12	+	120740946	120741022	True	NM_000928,NM_012240	chr12,chr12	-,+	PLA2G1B,SIRT4	24620,-882
chr19:11456898-11457151	chr19	+	11456969	11457151	True	NM_001170635,NM_001080503,NM_022737,NM_198536,NM_001145416,NM_033408,NM_004283	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,-,-,-,-	LPPR2,CCDC159,LPPR2,TMEM205,TMEM205,TMEM205,RAB3D	8910,29,8910,12,12,12,-6625
chr6:36160508-36161553	chr6	+	36160576	36161416	True	NM_001010903,NM_015695	chr6,chr6	-,+	C6orf222,BRPF3	143304,3133
chr12:49757193-49757604	chr12	+	49757360	49757616	True	NM_001008223,NM_023071	chr12,chr12	-,+	C1QL4,SPATS2	-26389,3071
chr3:161147892-161149495	chr3	+	161148198	161149168	True	NM_001080440,NM_001040100	chr3,chr3	+,-	OTOL1,C3orf57	65427,-58327
chr11:64824482-64824941	chr11	+	64824514	64824940	True	NM_005468,NM_013299	chr11,chr11	-,+	NAALADL1,SAC3D1	1119,-16189
chr10:127350137-127350420	chr10	+	127350185	127350447	True	NR_033848,NM_001128202	chr10,chr10	+,-	LOC283038,C10orf122	21364,21316
chr7:138482872-138483466	chr7	+	138482904	138483441	True	NM_020632,NM_130840,NM_001085429	chr7,chr7,chr7	-,-,+	ATP6V0A4,ATP6V0A4,TMEM213	37,37,-216
chr5:55417491-55418751	chr5	+	55417570	55418134	True	NM_024669,NM_139017	chr5,chr5	-,+	ANKRD55,IL31RA	111102,-270288
chr9:131584211-131584924	chr9	+	131584317	131584763	True	NM_016390,NM_004435	chr9,chr9	-,+	C9orf114,ENDOG	7372,-3592
chr15:30302352-30303845	chr15	+	30302454	30303855	True	NR_026859,NM_175610	chr15,chr15	+,-	FAM7A3,TJP1	92079,-187748
chr17:30347956-30348369	chr17	+	30347991	30348261	True	NM_018428,NM_052888	chr17,chr17	-,+	UTP6,LRRC37B	-119262,-31
chr19:12444908-12445403	chr19	+	12444915	12445408	True	NM_003437,NM_145276	chr19,chr19	+,-	ZNF136,ZNF563	-171094,-381
chr4:55525675-55526361	chr4	+	55525690	55526257	True	NM_002253,NM_000222,NM_001093772	chr4,chr4,chr4	-,+,+	KDR,KIT,KIT	465556,-1646,-1646
chr9:132584516-132584755	chr9	+	132584566	132584784	True	NM_001110303,NM_000113	chr9,chr9	+,-	USP20,TOR1A	12911,1707
chr1:151316903-151317805	chr1	+	151317059	151317787	True	NM_000449,NM_002796,NM_001025603	chr1,chr1,chr1	-,+,-	RFX5,PSMB4,RFX5	2032,54253,2032
chr2:219535341-219535615	chr2	+	219535455	219535613	True	NM_022453,NM_015690	chr2,chr2	-,+	RNF25,STK36	1218,1148
chr17:32481543-32482235	chr17	+	32481604	32482230	True	NM_002982,NM_001094	chr17,chr17	+,-	CCL2,ACCN1	100065,1645
chr17:47492654-47493166	chr17	+	47492703	47492953	True	NM_002634,NM_002507	chr17,chr17	-,+	PHB,NGFR	-461,79701
chr4:16240482-16240728	chr4	+	16240482	16240749	True	NM_153365,NR_027697	chr4,chr4	-,+	TAPT1,FLJ39653	-12321,-12247
chr20:39766934-39767334	chr20	+	39766944	39767327	True	NM_002660,NM_182811,NM_015035	chr20,chr20,chr20	+,+,-	PLCG1,PLCG1,ZHX3	-836,-836,161462
chr5:149828953-149829157	chr5	+	149828952	149829188	True	NM_001025071,NM_001025070,NM_005617,NM_001543	chr5,chr5,chr5,chr5	-,-,-,+	RPS14,RPS14,RPS14,NDST1	181,181,181,58485
chr6:42126162-42127354	chr6	+	42126323	42127251	True	NM_001164446,NM_000409	chr6,chr6	-,+	C6orf132,GUCA1A	-15608,-3237
chr12:6744108-6745459	chr12	+	6744382	6745442	True	NM_001164094,NM_001142961,NM_020400	chr12,chr12,chr12	+,-,-	COPS7A,LPAR5,LPAR5	87707,-3567,-95
chr19:10359882-10360248	chr19	+	10359881	10359949	True	NM_015956,NM_146387,NM_004230,NM_146388	chr19,chr19,chr19,chr19	+,+,-,+	MRPL4,MRPL4,S1PR2,MRPL4	2690,2690,-17933,2690
chr1:111413087-111413732	chr1	+	111413162	111413723	True	NM_000560,NM_001040033,NM_001006945	chr1,chr1,chr1	+,+,-	CD53,CD53,C1orf103	1998,97,92894
chr19:56152032-56152233	chr19	+	56152133	56152215	True	NM_016535,NM_016202,NM_013301,NM_001163423,NM_203374,NM_207115	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,-,+	ZNF581,ZNF580,CCDC106,ZNF580,ZNF784,ZNF580	2770,1202,6738,1247,-16192,176
chr3:75485202-75486833	chr3	+	75485244	75486271	True	NR_031714,NR_024241	chr3,chr3	+,-	MIR1324,FAM86DP	193642,-978
chr19:15131850-15132252	chr19	+	15131972	15132276	True	NM_173482,NM_005071	chr19,chr19	+,-	CCDC105,SLC1A6	-10484,-48242
chr18:19192957-19194088	chr18	+	19193049	19193501	True	NM_006938,NM_052911	chr18,chr18	+,-	SNRPD1,ESCO1	-850,-12356
chr2:24232178-24232598	chr2	+	24232177	24232615	True	NM_001080473,NM_001142319	chr2,chr2	+,-	MFSD2B,C2orf44	337,37731
chr6:150327259-150327636	chr6	+	150327305	150327675	True	NR_024045,NM_025218	chr6,chr6	-,+	RAET1K,ULBP1	-1025,-42213
chr7:107384303-107384522	chr7	+	107384323	107384495	True	NM_000111,NM_024814,NR_024199	chr7,chr7,chr7	-,+,+	SLC26A3,CBLL1,CBLL1	59233,-95,-95
chr2:112899479-112899710	chr2	+	112899483	112899745	True	NM_001128165,NM_032494,NM_153214	chr2,chr2,chr2	+,-,+	FBLN7,ZC3H8,FBLN7	-3572,112969,-3572
chr7:100135424-100136447	chr7	+	100136075	100136491	True	NM_006076,NM_001168682	chr7,chr7	+,-	AGFG2,SAP25	342,34829
chr2:10284086-10284322	chr2	+	10284149	10284215	True	NR_036222,NM_182626	chr2,chr2	-,+	MIR4261,C2orf48	48632,-2691
chr5:90679687-90681519	chr5	+	90679773	90680851	True	NM_020801,NR_027435	chr5,chr5	-,+	ARRDC3,LOC100129716	-624,-3660
chr6:43044965-43045338	chr6	+	43044983	43045355	True	NM_002821,NM_015950,NM_152882,NM_152881,NM_152880	chr6,chr6,chr6,chr6,chr6	+,-,+,+,+	PTK7,MRPL2,PTK7,PTK7,PTK7	-1005,-17741,-1005,-1005,-1005
chr19:17582594-17582923	chr19	+	17582602	17582922	True	NM_198580,NM_138454	chr19,chr19	+,-	SLC27A1,NXNL1	-1353,-10877
chr3:49713677-49714100	chr3	+	49713750	49714140	True	NM_001640,NM_020998	chr3,chr3	+,-	APEH,MST1	-2366,12106
chr6:49709061-49710199	chr6	+	49709060	49709993	True	NM_006061,NM_001145652,NM_001190986	chr6,chr6,chr6	-,+,-	CRISP3,C6orf141,CRISP3	2234,-191004,2216
chr12:72340048-72341403	chr12	+	72340140	72341426	True	NM_173353,NR_024072	chr12,chr12	+,-	TPH2,MRS2P2	-7566,-95377
chr22:50918886-50919291	chr22	+	50918893	50919035	True	NM_024866,NM_017584,NM_002972	chr22,chr22,chr22	+,+,-	ADM2,MIOX,SBF1	976,6177,-5429
chr22:24825509-24825978	chr22	+	24825587	24826027	True	NR_028484,NM_000675	chr22,chr22	-,+	C22orf45,ADORA2A	64806,-2108
chr11:70048825-70049128	chr11	+	70048882	70049108	True	NM_003824,NM_005247	chr11,chr11	+,-	FADD,FGF3	160,-414690
chr14:67826669-67827089	chr14	+	67826771	67827055	True	NM_004094,NM_015994	chr14,chr14	+,-	EIF2S1,ATP6V1D	-22,-51
chr19:828260-829494	chr19	+	828275	828943	True	NM_001700,NM_024888	chr19,chr19	+,-	AZU1,LPPR3	-495,-6323
chr19:633957-634423	chr19	+	633977	634099	True	NM_005035,NM_020637	chr19,chr19	-,+	POLRMT,FGF22	-409,5826
chr1:76541265-76541829	chr1	+	76541406	76541886	True	NM_001160011,NM_152996,NR_026546	chr1,chr1,chr1	+,+,-	ST6GALNAC3,ST6GALNAC3,ASB17	-1082,-1082,-143290
chr2:31461775-31462040	chr2	+	31461799	31462005	True	NM_014600,NM_001145122	chr2,chr2	+,-	EHD3,CAPN14	-4970,-21388
chr12:4215200-4217195	chr12	+	4215379	4216926	True	NM_001759,NM_020367	chr12,chr12	+,-	CCND2,PARP11	165975,-232771
chr2:46523052-46523498	chr2	+	46523280	46523458	True	NM_001430,NM_080653	chr2,chr2	+,-	EPAS1,ATP6V1E2	1082,223688
chr7:30182027-30182614	chr7	+	30182063	30182511	True	NM_017946,NM_152793	chr7,chr7	-,+	FKBP14,C7orf41	-115795,-7563
chr17:1619747-1619964	chr17	+	1619784	1619892	True	NM_001163811,NR_028503,NR_028502,NR_028505,NR_028504,NM_001164407,NM_001163809,NM_001163673,NM_152348,NR_029494	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,-,-,-,+,+,+,-	WDR81,C17orf91,C17orf91,C17orf91,C17orf91,TLCD2,WDR81,WDR81,WDR81,MIR22	7941,-218,-218,-218,-218,-6122,8232,-18,-18,-2503
chr6:13615872-13616149	chr6	+	13615964	13616098	True	NM_016167,NM_005493	chr6,chr6	+,-	NOL7,RANBP9	-456,95748
chr19:57019283-57019912	chr19	+	57019547	57019957	True	NM_020813,NR_030740	chr19,chr19	+,-	ZNF471,ZNF667	-386,-30777
chr1:155527364-155528116	chr1	+	155527611	155527991	True	NR_027023,NM_018489	chr1,chr1	+,-	LOC645676,ASH1L	3780,4383
chr19:49141668-49142187	chr19	+	49141756	49142058	True	NM_001217,NM_001352,NR_004401	chr19,chr19,chr19	-,-,+	CA11,DBP,SEC1	7443,-1117,-511
chr4:21539409-21540396	chr4	+	21539727	21540431	True	NM_001035004,NM_145048	chr4,chr4	-,+	KCNIP4,PACRGL	5898,-837749
chr16:3452301-3452549	chr16	+	3452304	3452422	True	NM_017810,NM_001032292,NM_003450	chr16,chr16,chr16	-,+,+	ZNF434,ZNF174,ZNF174	-1279,-1165,-1165
chr5:140567242-140568015	chr5	+	140567256	140567963	True	NM_019120,NM_020957,NM_018930,NM_019119,NM_031947	chr5,chr5,chr5,chr5,chr5	+,+,+,+,-	PCDHB8,PCDHB16,PCDHB10,PCDHB9,SLC25A2	-9877,-6327,3988,-414,115712
chr10:97468295-97469231	chr10	+	97468294	97468990	True	NM_001143973,NM_001098175	chr10,chr10	-,+	TCTN3,ENTPD1	-14394,2545
chr5:60627120-60627372	chr5	+	60627124	60627324	True	NM_001048249,NM_020928	chr5,chr5	-,+	C5orf43,ZSWIM6	-168822,775
chr1:85040855-85041510	chr1	+	85040874	85041036	True	NM_004388,NR_036561	chr1,chr1	-,+	CTBS,SPATA1	-711,-68952
chr3:139256091-139256820	chr3	+	139256137	139256775	True	NM_001130992,NM_020191,NM_001130993,NM_002899	chr3,chr3,chr3,chr3	-,+,-,-	RBP1,MRPS22,RBP1,RBP1	1946,-193334,1946,1946
chr3:196046814-196047536	chr3	+	196047041	196047455	True	NM_152672,NM_152773	chr3,chr3	+,-	OSTalpha,TCTEX1D2	-103710,-1876
chr2:48547520-48548597	chr2	+	48547891	48548308	True	NM_001190274,NM_002158	chr2,chr2	-,+	FBXO11,FOXN2	-414959,-6154
chr2:88345492-88347235	chr2	+	88345667	88347057	True	NM_016618,NM_198274	chr2,chr2	-,+	KRCC1,SMYD1	8255,20241
chr4:120146823-120148513	chr4	+	120147047	120148517	True	NM_001001701,NM_019050	chr4,chr4	-,+	C4orf3,USP53	73501,-13325
chr17:80312572-80313266	chr17	+	80312605	80312986	True	NM_003004,NM_207459	chr17,chr17	-,+	SECTM1,TEX19	-20684,4136
chr18:155659-156402	chr18	+	155963	156427	True	NM_005131,NM_005151,NM_001037334	chr18,chr18,chr18	-,+,+	THOC1,USP14,USP14	111682,2055,2055
chr12:43070929-43072337	chr12	+	43071128	43072364	True	NM_016488,NM_153026	chr12,chr12	+,-	PPHLN1,PRICKLE1	-351233,-87556
chr11:132813965-132814248	chr11	+	132813996	132814205	True	NM_002545,NM_016522	chr11,chr11	-,+	OPCML,NTM	-959,-1033335
chr13:96088203-96088528	chr13	+	96088285	96088433	True	NM_001105515,NM_182848,NM_001160100	chr13,chr13,chr13	-,+,+	ABCC4,CLDN10,CLDN10	-134598,-2486,-2486
chrX:153688639-153689407	chrX	+	153688802	153689136	True	NM_017514,NM_006014	chrX,chrX	+,-	PLXNA3,LAGE3	-2230,18510
chr1:166572026-166572899	chr1	+	166572288	166572769	True	NM_053053,NR_002925	chr1,chr1	-,+	TADA1,FMO9P	272936,383
chr6:3750866-3751074	chr6	+	3750962	3751022	True	NM_183373,NM_012135	chr6,chr6	-,+	C6orf145,FAM50B	1274,98609
chr10:73077615-73078105	chr10	+	73077633	73078071	True	NM_001174098,NM_018344,NR_033414,NR_033413,NM_001164375	chr10,chr10,chr10,chr10,chr10	+,+,+,+,-	SLC29A3,SLC29A3,SLC29A3,SLC29A3,C10orf105	938,938,938,938,401557
chr10:42859278-42861019	chr10	+	42859687	42860799	True	NR_024380,NR_026827	chr10,chr10	-,+	LOC441666,LOC84856	2744,110139
chr3:193853945-193854205	chr3	+	193853985	193854101	True	NR_033944,NM_005524	chr3,chr3	-,+	LOC647323,HES1	-132537,-105
chr5:1010036-1010513	chr5	+	1010090	1010554	True	NM_033120,NM_006598	chr5,chr5	+,-	NKD2,SLC12A7	-973,101668
chr5:70362450-70362871	chr5	+	70362467	70362677	True	NM_022877,NM_001515	chr5,chr5	+,-	SMN2,GTF2H2	-141750,870
chr5:70362450-70362871	chr5	-	68856920	68857059	False	NR_027439,NM_001042490,NM_001098728	chr5,chr5,chr5	-,+,+	LOC100272216,GTF2H2D,GTF2H2C	72019,-904,-927
chr5:70362450-70362871	chr5	-	69712020	69712230	False	NR_033417,NR_033968	chr5,chr5	+,-	GTF2H2B,LOC100049076	-874,138970
chr1:14085604-14087332	chr1	+	14085817	14087354	True	NM_001007257,NM_001010847	chr1,chr1	+,-	PRDM2,LRRC38	-9999,-245575
chr17:72870669-72872377	chr17	+	72871157	72872217	True	NM_178160,NM_004110,NM_024417	chr17,chr17,chr17	+,-,-	OTOP2,FDXR,FDXR	48152,-2001,-2001
chr15:38749425-38751209	chr15	+	38749651	38751054	True	NM_001042429,NM_001128602,NM_173611	chr15,chr15,chr15	+,-,+	FAM98B,RASGRP1,FAM98B	-3383,106003,-3383
chr5:169395857-169396168	chr5	+	169395856	169396050	True	NM_012188,NM_001129891	chr5,chr5	+,-	FOXI1,FAM196B	136866,11744
chr9:93507440-93508622	chr9	+	93508586	93508668	True	NM_001135052,NM_017594	chr9,chr9	+,-	SYK,DIRAS2	55343,-103478
chr3:16553746-16554125	chr3	+	16553750	16554137	True	NM_138381,NM_015150	chr3,chr3	+,-	OXNAD1,RFTN1	-247134,1135
chr11:57980417-57981726	chr11	+	57980554	57981775	True	NM_001004458,NM_001004459	chr11,chr11	+,-	OR1S1,OR1S2	441,-8901
chr11:45936484-45937018	chr11	+	45936565	45936989	True	NM_152312,NM_004813,NM_001080446,NM_057174	chr11,chr11,chr11,chr11	+,-,-,-	GYLTL1B,PEX16,C11orf94,PEX16	6206,2735,-7732,2735
chr12:57404058-57405427	chr12	+	57404267	57405275	True	NM_013251,NM_007264,NM_014830,NM_001178054,NR_033654	chr12,chr12,chr12,chr12,chr12	-,+,-,-,-	TAC3,GPR182,ZBTB39,TAC3,TAC3	5119,-15963,-3970,5119,5119
chr1:15573037-15573745	chr1	+	15573041	15573657	True	NM_052929,NR_027136	chr1,chr1	+,-	FHAD1,C1orf126	110,-94081
chr11:574865-575312	chr11	+	574909	575259	True	NR_029623,NM_020901,NR_026967	chr11,chr11,chr11	-,+,-	MIR210,PHRF1,LOC143666	-6711,1223,676
chr8:72754951-72755372	chr8	+	72754990	72755366	True	NM_005098,NR_033651,NR_033652	chr8,chr8,chr8	-,+,+	MSC,LOC100132891,LOC100132891	1415,984,-9
chr9:100462480-100462780	chr9	+	100462522	100462750	True	NM_000380,NR_027302,NM_002486	chr9,chr9,chr9	-,-,+	XPA,XPA,NCBP1	-2831,-2831,-66868
chr11:124433252-124435020	chr11	+	124433252	124434988	True	NM_001005194,NM_001005195	chr11,chr11	+,-	OR8A1,OR8B12	4976,-19702
chr5:173156213-173156528	chr5	+	173156218	173156575	True	NR_027109,NM_138369	chr5,chr5	+,-	LOC285593,BOD1	-149612,-112552
chr19:16436570-16437102	chr19	+	16436765	16437149	True	NM_021235,NM_016270	chr19,chr19	-,+	EPS15L1,KLF2	145663,-1165
chr17:26926566-26927319	chr17	+	26926571	26927083	True	NM_003170,NM_006461	chr17,chr17	+,-	SUPT6H,SPAG5	62218,-515
chr5:133745358-133747200	chr5	+	133745357	133747084	True	NM_003337,NM_080656	chr5,chr5	+,-	UBE2B,CDKN2AIPNL	-38547,571
chr22:38219334-38220546	chr22	+	38219710	38220573	True	NM_138797,NM_003614	chr22,chr22	-,+	ANKRD54,GALR3	19830,-372
chr9:35115134-35115928	chr9	+	35115174	35115754	True	NM_006377,NM_025182	chr9,chr9	+,-	UNC13B,KIAA1539	46234,189
chr11:67141423-67141824	chr11	+	67141589	67141873	True	NM_001166212,NM_004584,NM_013246	chr11,chr11,chr11	-,+,-	CLCF1,RAD9A,CLCF1	11,17549,-383
chr16:88210350-88210589	chr16	+	88210454	88210610	True	NM_001173543,NM_001739	chr16,chr16	+,-	BANP,CA5A	-206881,-240342
chr12:7845889-7847337	chr12	+	7846154	7847364	True	NM_199286,NM_020634	chr12,chr12	+,-	DPPA3,GDF3	16724,1047
chr2:85107208-85107449	chr2	+	85107208	85107470	True	NM_021103,NM_001080824	chr2,chr2	+,-	TMSB10,C2orf89	25292,832
chr17:21189293-21189506	chr17	+	21189296	21189554	True	NM_152914,NM_145109,NM_002756	chr17,chr17,chr17	-,+,+	C17orf103,MAP2K3,MAP2K3	-32718,-1379,1793
chrY:14451327-14451659	chrY	+	14451336	14451553	True	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	322744,81886
chr3:194408561-194408768	chr3	+	194408582	194408736	True	NM_018385,NM_153690	chr3,chr3	-,+	LSG1,FAM43A	-15376,-2011
chr7:74348054-74348930	chr7	+	74348145	74348443	True	NM_001025202,NM_001145063	chr7,chr7	-,+	STAG3L2,GATSL1	-41414,30639
chr7:74348054-74348930	chr7	+	72538687	72538985	False	NR_003664,NR_003580	chr7,chr7	-,+	SPDYE8P,LOC100093631	-38378,30026
chr7:74348054-74348930	chr7	-	74683642	74683940	False	NM_001003795,NR_003580	chr7,chr7	+,-	GTF2IRD2B,LOC100093631	-175346,-30183
chr7:74348054-74348930	chr7	-	74897895	74898193	False	NM_001145064,NR_003664	chr7,chr7	-,+	GATSL2,SPDYE8P	-30554,38339
chr15:67358732-67358963	chr15	+	67358872	67358942	True	NM_005902,NM_024666	chr15,chr15	+,-	SMAD3,AAGAB	-728,188182
chr12:1704181-1704441	chr12	+	1704316	1704376	True	NM_030775,NM_152441	chr12,chr12	+,-	WNT5B,FBXL14	21845,-985
chr6:1390429-1390684	chr6	+	1390517	1390679	True	NM_001452,NR_027116	chr6,chr6	+,-	FOXF2,LOC285768	-499,-288950
chr6:26249245-26249465	chr6	+	26249289	26249357	True	NM_003547,NM_021018,NM_003540,NM_003524	chr6,chr6,chr6,chr6	-,-,+,+	HIST1H4G,HIST1H3F,HIST1H4F,HIST1H2BH	-2084,1528,-8686,2521
chr9:80765168-80765615	chr9	+	80765184	80765630	True	NM_001098802,NM_002072	chr9,chr9	+,-	CEP78,GNAQ	85360,-118965
chr5:82401080-82402610	chr5	+	82401328	82402635	True	NM_022550,NM_174909	chr5,chr5	+,-	XRCC4,TMEM167A	-28069,-28056
chr1:1295145-1295474	chr1	+	1295145	1295337	True	NM_152228,NM_032348	chr1,chr1	+,-	TAS1R3,MXRA8	-28470,-1230
chr10:43902286-43902640	chr10	+	43902394	43902616	True	NM_004966,NR_026693,NM_001098204,NM_001098205,NM_001098206,NM_001098207	chr10,chr10,chr10,chr10,chr10,chr10	-,+,-,-,-,-	HNRNPF,ZNF487P,HNRNPF,HNRNPF,HNRNPF,HNRNPF	2090,29957,2130,1766,733,-9600
chr16:3212157-3213068	chr16	+	3212262	3213065	True	NR_024167,NM_001134655	chr16,chr16	-,+	MGC3771,ZNF213	-46663,-27179
chr3:122784184-122785556	chr3	+	122784582	122785600	True	NR_028444,NM_006810,NM_001031702	chr3,chr3,chr3	+,+,-	PDIA5,PDIA5,SEMA5B	255,255,-38006
chr21:40823039-40823632	chr21	+	40823229	40823559	True	NM_152505,NM_007341,NM_001001713	chr21,chr21,chr21	-,+,+	LCA5L,SH3BGR,SH3BGR	-7101,220,-5483
chr16:89990154-89990552	chr16	+	89990157	89990487	True	NM_002386,NM_145039,NM_001197181,NM_006086	chr16,chr16,chr16,chr16	+,-,+,+	MC1R,CENPBD1,TUBB3,TUBB3	-5921,48803,-1791,-521
chr22:46691805-46692179	chr22	+	46691846	46692134	True	NR_024009,NM_016426	chr22,chr22	-,+	CN5H6.4,GTSE1	473,503
chr6:40555405-40555631	chr6	+	40555478	40555540	True	NR_024015,NM_020737	chr6,chr6	+,-	TDRG1,LRFN2	-209366,-352
chr6:14813412-14814085	chr6	+	14813414	14814100	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	432426,849239
chrX:105956545-105957125	chrX	+	105956817	105957127	True	NM_194463,NM_001171706	chrX,chrX	+,-	RNF128,RIPPLY1	12766,189484
chr12:125475012-125475812	chr12	+	125475403	125475687	True	NM_032656,NM_080626	chr12,chr12	-,+	DHX37,BRI3BP	-1736,2506
chrX:49027594-49028103	chrX	+	49027835	49028071	True	NM_002668,NM_006150,NM_001099682,NM_001099681,NM_001099680,NM_024859	chrX,chrX,chrX,chrX,chrX,chrX	+,-,+,+,+,+	PLP2,PRICKLE3,MAGIX,MAGIX,MAGIX,MAGIX	112,14755,-8715,-8715,-7626,-8715
chr9:101990233-101990463	chr9	+	101990259	101990481	True	NM_006808,NR_024532,NM_033087	chr9,chr9,chr9	+,-,-	SEC61B,ALG2,ALG2	-5741,-6013,-6013
chr16:72033092-72033664	chr16	+	72033209	72033699	True	NM_001361,NM_181536	chr16,chr16	+,-	DHODH,PKD1L3	8943,230
chr17:40895279-40896547	chr17	+	40895869	40896410	True	NM_005854,NM_001991	chr17,chr17	+,-	RAMP2,EZH1	16801,711
chr12:54655372-54655581	chr12	+	54655395	54655581	True	NM_002136,NM_001127322,NM_001127321	chr12,chr12,chr12	+,-,-	HNRNPA1,CBX5,CBX5	18906,-2066,-2025
chr19:6499583-6500470	chr19	+	6499614	6500481	True	NM_003811,NM_006087	chr19,chr19	+,-	TNFSF9,TUBB4	30528,1899
chr11:4792676-4794202	chr11	+	4792685	4794221	True	NM_001004753,NM_001004752	chr11,chr11	+,-	OR51F2,OR51F1	48394,-1538
chr4:54231856-54232170	chr4	+	54231906	54232202	True	NM_001134937,NM_152540	chr4,chr4	+,-	FIP1L1,SCFD2	11617,90
chr15:59224321-59225311	chr15	+	59224346	59225219	True	NM_001013843,NM_024755,NM_017610	chr15,chr15,chr15	-,-,+	SLTM,SLTM,RNF111	683,683,54645
chr8:23702620-23703511	chr8	+	23702625	23703545	True	NM_003155,NM_016612	chr8,chr8	-,+	STC1,SLC25A37	8825,-316313
chr4:52742125-52742569	chr4	+	52742124	52742319	True	NM_001024611,NM_015115	chr4,chr4	-,+	LRRC66,DCUN1D4	141531,-32903
chr7:100269690-100270610	chr7	+	100269746	100270296	True	NM_005273,NM_016188	chr7,chr7	+,-	GNB2,ACTL6B	1066,-15662
chr3:152552408-152552695	chr3	+	152552412	152552726	True	NM_002563,NM_001123228	chr3,chr3	+,-	P2RY1,TMEM14E	9,-493633
chr17:72269744-72270335	chr17	+	72269911	72270282	True	NR_026914,NM_001172810,NM_023036	chr17,chr17,chr17	-,+,+	MGC16275,DNAI2,DNAI2	-60451,103,103
chr2:85555808-85556290	chr2	+	85555824	85556138	True	NM_001135021,NM_006464	chr2,chr2	+,-	ELMOD3,TGOLN2	25704,-450
chr7:105026615-105026930	chr7	+	105026771	105026892	True	NM_182692,NM_021930	chr7,chr7	-,+	SRPK2,RINT1	2504,145639
chr13:42621863-42622121	chr13	+	42621896	42622130	True	NM_178009,NM_001204504,NM_152910,NM_001009814	chr13,chr13,chr13,chr13	+,+,+,-	DGKH,DGKH,DGKH,KIAA0564	712,-7775,712,-86675
chr10:93601-93863	chr10	+	93682	93890	True	NM_001164154,NM_177987,NM_006624	chr10,chr10,chr10	-,-,+	TUBB8,TUBB8,ZMYND11	1664,1338,86514
chr3:20228202-20229305	chr3	+	20228297	20229339	True	NM_001012409,NM_003884,NM_001199253,NM_001199252,NM_001199251,NM_001012410,NM_001199257,NM_001199256,NM_001199255,NM_001199254,NM_001012413,NM_001012412,NM_138484,NM_001012411	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-,-,-,-,-,-,-,-,-	SGOL1,KAT2B,SGOL1,SGOL1,SGOL1,SGOL1,SGOL1,SGOL1,SGOL1,SGOL1,SGOL1,SGOL1,SGOL1,SGOL1	-599,-146824,-573,-573,-573,-599,-573,-573,-573,-573,-599,-599,-599,-599
chr10:6188942-6189314	chr10	+	6189006	6189352	True	NM_001145443,NR_036111,NM_000417	chr10,chr10,chr10	+,+,-	PFKFB3,MIR3155,IL2RA	-2214,4806,-84673
chr15:56212561-56213653	chr15	+	56212565	56213274	True	NM_198400,NM_198524	chr15,chr15	-,+	NEDD4,TEX9	-3236,444369
chr3:113792519-113793336	chr3	+	113792669	113793292	True	NM_020817,NM_024638	chr3,chr3	-,+	KIAA1407,QTRTD1	-17209,-17109
chr12:56216497-56216942	chr12	+	56216497	56216982	True	NR_026723,NR_026722,NR_036478,NR_036479,NM_032364,NM_033082,NR_036476,NR_036477,NM_014182	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,-,+,+,-,-,+,+,+	SARNP,SARNP,LOC440104,LOC440104,DNAJC14,SARNP,LOC440104,LOC440104,ORMDL2	-4957,-4957,6409,6409,6489,-4957,6409,6409,-4744
chr2:128436715-128437327	chr2	+	128436920	128437100	True	NM_001161404,NM_001136037,NM_001161403,NM_032740	chr2,chr2,chr2,chr2	-,-,-,+	LIMS2,LIMS2,LIMS2,SFT2D3	2310,-4156,-4156,21496
chr5:76757517-76757954	chr5	+	76757705	76757895	True	NM_003719,NM_018268	chr5,chr5	+,-	PDE8B,WDR41	-251058,30487
chr2:233898869-233899076	chr2	+	233898967	233899101	True	NM_005383,NM_019850	chr2,chr2	+,-	NEU2,NGEF	-1636,-21016
chr19:58399508-58399965	chr19	+	58399611	58399831	True	NM_001144989,NM_032828	chr19,chr19	-,+	ZNF814,ZNF587	661,-38481
chr18:52626303-52626536	chr18	+	52626354	52626466	True	NM_004163,NM_001143829,NM_025214	chr18,chr18,chr18	+,-,-	RAB27B,CCDC68,CCDC68	-130565,-1075,323
chr14:105563030-105563403	chr14	+	105563124	105563364	True	NM_174891,NM_013345	chr14,chr14	+,-	C14orf79,GPR132	-110559,-31370
chr22:41252664-41252961	chr22	+	41252692	41252974	True	NM_003932,NM_001204827,NM_022098,NM_145174	chr22,chr22,chr22,chr22	-,+,+,-	ST13,XPNPEP3,XPNPEP3,DNAJB7	-5,110,110,5206
chr10:27529991-27530398	chr10	+	27530146	27530378	True	NM_032844,NR_024150,NM_145698,NM_001042473	chr10,chr10,chr10,chr10	+,-,-,-	MASTL,ACBD5,ACBD5,ACBD5	-86444,740,-338,740
chr19:1594796-1595047	chr19	+	1594960	1595042	True	NR_026557,NM_003926	chr19,chr19	+,-	PLK5P,MBD3	-70933,-2308
chr6:26251145-26251514	chr6	+	26251145	26251569	True	NM_003547,NM_021018,NM_003524	chr6,chr6,chr6	-,-,+	HIST1H4G,HIST1H3F,HIST1H2BH	-3940,-310,309
chr19:49221255-49221735	chr19	+	49221394	49221628	True	NM_001130915,NM_001097638,NM_182574	chr19,chr19,chr19	-,+,-	MAMSTR,FUT2,MAMSTR	1398,-22217,-1180
chr13:25564324-25565358	chr13	+	25564661	25565153	True	NR_026730,NM_030979	chr13,chr13	-,+	TPTE2P1,PABPC3	-22054,105122
chr19:49117710-49117953	chr19	+	49117794	49117908	True	NM_001204159,NM_001204158,NM_000979,NM_017708,NM_133498,NM_020126	chr19,chr19,chr19,chr19,chr19,chr19	+,+,-,-,+,+	SPHK2,SPHK2,RPL18,FAM83E,SPACA4,SPHK2	4882,4639,4575,-1100,-7845,4639
chrX:9433050-9433312	chrX	+	9433113	9433325	True	NM_001139466,NM_001139467,NM_005647,NM_001139468,NM_000273	chrX,chrX,chrX,chrX,chrX	+,+,+,+,-	TBL1X,TBL1X,TBL1X,TBL1X,GPR143	-1829,-1829,37,-1829,300730
chr2:139279655-139280688	chr2	+	139279683	139280619	True	NM_001001664,NM_007226	chr2,chr2	+,-	SPOPL,NXPH2	-20384,257254
chr22:39965645-39966833	chr22	+	39965858	39966596	True	NM_001003406,NM_194326,NM_021096	chr22,chr22,chr22	+,-,+	CACNA1I,RPS19BP1,CACNA1I	161,-36998,161
chr11:118531797-118532779	chr11	+	118531879	118532657	True	NM_001144759,NM_007180	chr11,chr11	+,-	PHLDB1,TREH	-53624,17774
chr12:107076418-107077999	chr12	+	107076445	107077769	True	NM_001033050,NM_032491	chr12,chr12	-,+	MTERFD3,RFX4	303210,716
chr5:64064531-64064770	chr5	+	64064534	64064782	True	NM_173829,NM_005869	chr5,chr5	-,+	SREK1IP1,CWC27	-38,10
chr1:44874044-44874457	chr1	+	44874067	44874458	True	NM_018150,NM_024066	chr1,chr1	+,-	RNF220,ERI3	-3158,-53128
chr11:56015183-56016650	chr11	+	56015430	56016681	True	NM_001004746,NM_001004747	chr11,chr11	-,+	OR5T2,OR5T3	-14769,2994
chr19:50936990-50938016	chr19	+	50936996	50937932	True	NM_004533,NM_138411	chr19,chr19	+,-	MYBPC2,FAM71E1	-887,42121
chr15:42264763-42264994	chr15	+	42264812	42264978	True	NM_139265,NM_001114633	chr15,chr15	-,+	EHD4,PLA2G4B	-57,-133852
chr2:202507408-202507778	chr2	+	202507585	202507737	True	NM_152388,NM_001044385,NM_139158	chr2,chr2,chr2	-,-,+	ALS2CR4,ALS2CR4,CDK15	-175,537,163460
chrX:101904635-101905770	chrX	+	101904676	101905510	True	NM_021992,NM_014710,NM_001184727,NM_001099410,NM_001099411	chrX,chrX,chrX,chrX,chrX	-,+,+,+,+	TMSB15A,GPRASP1,GPRASP1,GPRASP1,GPRASP1	-132977,783,818,783,783
chr19:54703515-54703837	chr19	+	54703563	54703699	True	NM_001146056,NM_001146082,NM_001146083,NM_024075,NM_024298,NM_001013,NM_001077446	chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,+,-,+,+	MBOAT7,MBOAT7,MBOAT7,TSEN34,MBOAT7,RPS9,TSEN34	-9830,-9830,-9830,-9495,-9830,1026,-8510
chr2:39664245-39664456	chr2	+	39664333	39664393	True	NR_037875,NM_003618	chr2,chr2	+,-	LOC728730,MAP4K3	163,-114
chr6:161583528-161583760	chr6	+	161583665	161583778	True	NM_006724,NR_024277	chr6,chr6	+,-	MAP3K4,NCRNA00241	-170895,-651
chr4:25527785-25528079	chr4	+	25527784	25527929	True	NM_015187,NM_001177998	chr4,chr4	-,+	SEL1L3,SLC34A2	336732,129505
chr15:40531889-40532239	chr15	+	40531947	40532185	True	NM_020168,NM_001039905	chr15,chr15	+,-	PAK6,C15orf56	25,12975
chr12:13229053-13229256	chr12	+	13229069	13229305	True	NM_031289,NM_020853	chr12,chr12	-,+	GSG1,KIAA1467	19454,-31805
chr9:95821508-95821776	chr9	+	95821513	95821773	True	NM_004148,NM_145006	chr9,chr9	-,+	NINJ1,SUSD3	74847,-575
chr19:12724116-12725206	chr19	+	12724475	12725023	True	NM_153358,NM_020714	chr19,chr19	+,-	ZNF791,ZNF490	-2794,-2852
chr8:95212043-95213022	chr8	+	95212100	95213062	True	NM_004063,NM_001161778	chr8,chr8	-,+	CDH17,PDP1	7803,-282166
chr7:136555615-136555815	chr7	+	136555666	136555740	True	NM_001006632,NM_001006630,NM_001006627,NM_001006631,NM_001006629,NM_001006628,NM_001006626,NM_000739,NM_002825	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,+,+,+,+,-	CHRM2,CHRM2,CHRM2,CHRM2,CHRM2,CHRM2,CHRM2,CHRM2,PTN	-1885,-2318,-2318,-1885,-1733,-1724,-1848,-1885,472856
chr2:166042702-166043084	chr2	+	166042840	166043102	True	NM_001040142,NM_001081676	chr2,chr2	+,-	SCN2A,SCN3A	52809,17525
chr9:130913529-130913805	chr9	+	130913613	130913837	True	NR_027812,NM_024112,NM_005564	chr9,chr9,chr9	-,+,+	PTGES2,C9orf16,LCN2	-22901,8701,-1932
chr21:45759123-45759329	chr21	+	45759168	45759352	True	NM_003307,NM_004928	chr21,chr21	+,-	TRPM2,C21orf2	14131,-17
chr19:36001140-36001406	chr19	+	36001287	36001399	True	NM_001035516,NM_001190348,NM_001126059,NM_001126058,NM_001126057,NM_001190347,NM_001190349,NM_001126056,NR_033746,NM_014364,NM_033317	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,-,-,+,-	DMKN,DMKN,DMKN,DMKN,DMKN,DMKN,DMKN,DMKN,DMKN,GAPDHS,DMKN	-8474,3211,42,3211,3211,3211,3211,3211,63,22914,3211
chr6:17703283-17704243	chr6	+	17703541	17704173	True	NM_005124,NM_016255	chr6,chr6	-,+	NUP153,FAM8A1	2696,-103074
chr11:705840-706059	chr11	+	705857	705925	True	NM_021008,NM_022772	chr11,chr11	-,+	DEAF1,EPS8L2	-10117,194
chr9:112812144-112812509	chr9	+	112812207	112812535	True	NM_001012993,NM_001004065,NM_001198656	chr9,chr9,chr9	-,+,+	C9orf152,AKAP2,AKAP2	157928,-1380,-1380
chr2:160473500-160474642	chr2	+	160473513	160474691	True	NM_013450,NM_022826	chr2,chr2	-,+	BAZ2B,MARCH7	-454,94318
chr7:56672333-56672634	chr7	+	56672435	56672670	True	NR_029420,NR_026929	chr7,chr7	-,+	LOC650226,DKFZp434L192	-156367,-108581
chrX:91141892-91143508	chrY	+	4977001	4977082	False	NM_032973,NR_001540	chrY,chrY	+,-	PCDH11Y,TTTY23	-52933,1134632
chrX:91141892-91143508	chrX	+	91142154	91142903	True	NM_001168363,NM_004538	chrX,chrX	+,-	PCDH11X,NAP1L3	-51746,1785832
chrX:135289368-135290589	chrX	+	135289578	135290624	True	NM_001173517,NM_001159699	chrX,chrX	-,+	MAP7D3,FHL1	43164,-10577
chr12:6989428-6990888	chr12	+	6990457	6990603	True	NM_032641,NR_033796,NM_001146316,NR_002803	chr12,chr12,chr12,chr12	-,+,-,+	SPSB2,DSTNP2,SPSB2,RPL13P5	-7936,3242,-8008,2541
chr1:85363799-85364264	chr1	+	85363921	85364240	True	NM_145172,NM_012152	chr1,chr1	+,-	WDR63,LPAR3	163752,-5025
chr11:116666246-116667153	chr11	+	116666303	116666873	True	NM_003904,NM_000040,NM_001166598,NM_052968	chr11,chr11,chr11,chr11	-,+,-,-	ZNF259,APOC3,APOA5,APOA5	-7564,33750,-3167,-3167
chr12:7250175-7250583	chr12	+	7250179	7250581	True	NR_026947,NM_001733	chr12,chr12	+,-	LOC283314,C1R	10322,-5136
chr5:78281353-78281825	chr5	+	78281400	78281836	True	NM_000046,NM_001178005,NM_198709	chr5,chr5,chr5	-,+,-	ARSB,BHMT2,ARSB	571,83710,-20
chr16:1756401-1756693	chr16	+	1756439	1756633	True	NM_002513,NM_015133,NM_001040439	chr16,chr16,chr16	-,+,+	NME3,MAPK8IP3,MAPK8IP3	65127,-269,-269
chr12:42750529-42752501	chr12	+	42750601	42752545	True	NM_016488,NM_033114	chr12,chr12	+,-	PPHLN1,ZCRB1	-30717,-30669
chr22:36023637-36024278	chr22	+	36023735	36024145	True	NM_203377,NM_030641	chr22,chr22	-,+	MB,APOL6	-4334,20278
chr11:3080305-3081165	chr11	+	3080458	3080698	True	NM_001194997,NM_001014437,NR_036542,NM_139273,NM_001751,NM_002555	chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,-,+	CARS,CARS,CARS,CARS,CARS,SLC22A18	-1777,-1777,-1777,-1777,-1777,-156997
chr17:79874693-79875535	chr17	+	79874751	79875536	True	NM_016538,NR_015454,NM_002861,NM_001184917,NM_032711,NR_033682,NR_033683,NR_033681,NR_033685	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,-,-,-,-,-,-,-	SIRT7,LOC92659,PCYT2,PCYT2,MAFG,PCYT2,PCYT2,PCYT2,PCYT2	572,10168,-5411,-5411,5922,-5411,-5674,-5411,-5674
chr2:29295564-29296258	chr2	+	29295667	29296229	True	NM_001029883,NM_024692	chr2,chr2	-,+	C2orf71,CLIP4	948,42078
chr8:144294800-144295134	chr8	+	144294879	144295155	True	NM_178172,NM_001130478	chr8,chr8	+,-	GPIHBP1,LY6H	-28,-52826
chr1:48283798-48285348	chr1	+	48284252	48285194	True	NM_001194986,NM_004474	chr1,chr1	-,+	LOC388630,FOXD2	177418,-382614
chr16:3305821-3306436	chr16	+	3305952	3306213	True	NR_033904,NM_001198536,NM_000243	chr16,chr16,chr16	+,-,-	FLJ39639,MEFV,MEFV	7554,464,464
chr10:6245689-6245964	chr10	+	6245692	6245870	True	NM_004566,NM_000417	chr10,chr10	+,-	PFKFB3,IL2RA	-903,-141359
chr20:56878033-56878684	chr20	+	56878178	56878703	True	NR_003505,NM_020673	chr20,chr20	-,+	PPP4R1L,RAB22A	5843,6067
chr17:48781595-48782195	chr17	+	48781899	48782197	True	NM_052855,NM_006107	chr17,chr17	-,+	ANKRD40,LUC7L3	3123,14728
chr7:27215707-27216055	chr7	+	27215878	27216092	True	NM_005523,NM_018951,NR_037940,NR_037939,NR_029911,NM_153715,NR_002795	chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,-,+	HOXA11,HOXA10,HOXA10-HOXA9,HOXA10,MIR196B,HOXA10,HOXA11-AS1	8793,-1923,3838,3838,-6696,3834,8934
chr16:84680812-84681125	chr16	+	84680945	84681007	True	NM_021149,NM_024731	chr16,chr16	-,+	COTL1,KLHL36	-29276,1123
chr4:175896766-175897166	chr4	+	175896770	175897141	True	NM_014269,NM_006529	chr4,chr4	+,-	ADAM29,GLRA3	-57312,-146305
chr14:65171953-65172413	chr14	+	65172032	65172248	True	NM_015549,NM_001024858	chr14,chr14	+,-	PLEKHG3,SPTB	-895,117668
chr2:54789988-54790831	chr2	+	54790100	54790650	True	NM_178313,NM_001003937	chr2,chr2	+,-	SPTBN1,TSPYL6	-4629,-306691
chr15:65504135-65504638	chr15	+	65504210	65504558	True	NM_001101362,NM_003613	chr15,chr15	+,-	KBTBD13,CILP	-135109,-370
chr6:136563073-136563587	chr6	+	136563309	136563645	True	NM_001099286,NM_018945,NM_138419	chr6,chr6,chr6	-,+,-	FAM54A,PDE7B,FAM54A	7866,-390533,7866
chr12:121570776-121571820	chr12	+	121570803	121571533	True	NM_198213,NM_002562,NR_033949,NR_033948,NR_033952,NR_033953,NR_033950,NR_033951,NR_033956,NR_033954,NR_033955	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,+,+,+,+,+,+,+,+	OASL,P2RX7,P2RX7,P2RX7,P2RX7,P2RX7,P2RX7,P2RX7,P2RX7,P2RX7,P2RX7	-94023,-223,-223,-223,-223,-232,-223,-223,-223,-223,-223
chr1:247925511-247926046	chr1	+	247925516	247925954	True	NM_015431,NM_012353	chr1,chr1	+,-	TRIM58,OR1C1	94546,-3808
chr15:85201827-85202404	chr15	+	85202027	85202433	True	NR_004859,NM_032856,NM_021077,NM_205858	chr15,chr15,chr15,chr15	+,-,-,-	SCAND2,WDR73,NMB,NMB	-27387,-4506,-225,-225
chr15:63476293-63477611	chr15	+	63476637	63477615	True	NM_016530,NM_015920	chr15,chr15	+,-	RAB8B,RPS27L	4112,-26896
chr3:12526255-12526951	chr3	+	12526435	12526852	True	NM_001195279,NM_025265,NM_001145393,NM_001145392,NM_001145395,NM_001145394	chr3,chr3,chr3,chr3,chr3,chr3	-,+,+,+,+,+	LOC100129480,TSEN2,TSEN2,TSEN2,TSEN2,TSEN2	60161,-476,-555,-476,-476,-555
chr9:132222472-132222740	chr9	+	132222485	132222787	True	NM_199350,NM_001012715	chr9,chr9	-,+	C9orf50,C9orf106	160318,-139241
chr14:60974104-60975411	chr14	+	60974106	60975207	True	NM_007374,NM_174978	chr14,chr14	+,-	SIX6,C14orf39	730,-21342
chr10:86013941-86014213	chr10	+	86014054	86014258	True	NM_001012720,NM_001012722,NM_015613,NM_002921	chr10,chr10,chr10,chr10	+,+,-,+	RGR,RGR,LRIT1,RGR	-9296,-9296,-12837,-9296
chr12:5542465-5542844	chr12	+	5542491	5542779	True	NM_020373,NM_001102654	chr12,chr12	-,+	ANO2,NTF3	512669,-1262
chr9:33798168-33798518	chr9	+	33798167	33798499	True	NM_002771,NR_023917	chr9,chr9	+,-	PRSS3,PTENP1	-2659,-120749
chr5:110093706-110094336	chr5	+	110093756	110094258	True	NM_001039763,NM_138773	chr5,chr5	-,+	TMEM232,SLC25A46	-31306,-19060
chr15:65715542-65717292	chr15	+	65715910	65717172	True	NM_020962,NM_016395	chr15,chr15	-,+	IGDCC4,PTPLAD1	-500,105654
chr19:36644257-36644898	chr19	+	36644345	36644879	True	NM_001749,NM_001864	chr19,chr19	+,-	CAPNS1,COX7A1	-13478,-574
chr1:898371-898579	chr1	+	898432	898570	True	NM_015658,NM_198317,NM_001160184,NM_032129	chr1,chr1,chr1,chr1	-,+,+,+	NOC2L,KLHL17,PLEKHN1,PLEKHN1	-3753,-2516,3306,3306
chr11:415118-415428	chr11	+	415117	415313	True	NM_001135053,NM_007183,NM_021805,NM_001135054	chr11,chr11,chr11,chr11	-,+,-,-	SIGIRR,PKP3,SIGIRR,SIGIRR	2134,-20951,2134,-118
chr12:9438690-9440106	chr12	+	9438752	9439907	True	NR_036263,NR_024374	chr12,chr12	-,+	MIR1244-3,LOC642846	-46605,-2550
chr12:9438690-9440106	chr12	-	9597164	9598317	False	NR_033399,NR_024374	chr12,chr12	-,+	DDX12,LOC642846	2501,-160962
chr16:30544654-30544948	chr16	+	30544687	30544945	True	NM_023931,NM_024671,NM_002209	chr16,chr16,chr16	-,-,+	ZNF747,ZNF768,ITGAL	1299,-6777,-60755
chr19:40023398-40024007	chr19	+	40023440	40023699	True	NM_152361,NM_153232,NM_182704	chr19,chr19,chr19	-,-,+	EID2B,EID2,SELV	12,7190,-17738
chr5:176875764-176876669	chr5	+	176875922	176876442	True	NM_001174102,NM_030567,NM_080881,NM_001174101	chr5,chr5,chr5,chr5	+,+,-,+	PRR7,PRR7,DBN1,PRR7	-647,-2177,23479,-2177
chr9:118507385-118508950	chr9	+	118507748	118508923	True	NM_002581,NR_024032	chr9,chr9	+,-	PAPPA,C9orf27	407147,178505
chr14:55596875-55597368	chr14	+	55596907	55597253	True	NM_002306,NR_003225,NM_001146015,NM_001177388	chr14,chr14,chr14,chr14	+,+,-,+	LGALS3,LGALS3,DLGAP5,LGALS3	-1031,6447,61193,-1031
chr2:70352012-70352215	chr2	+	70352102	70352264	True	NM_006196,NR_024444	chr2,chr2	+,-	PCBP1,LOC100133985	-37571,234
chr10:72243594-72244385	chr10	+	72243614	72244172	True	NM_018055,NM_014431	chr10,chr10	-,+	NODAL,KIAA1274	-42149,-5108
chr3:148859929-148861779	chr3	+	148860062	148861664	True	NM_032383,NM_139048	chr3,chr3	+,-	HPS3,HLTF	-12742,-55721
chr4:169915502-169915996	chr4	+	169915507	169915709	True	NM_001166110,NM_032783	chr4,chr4	+,-	PALLD,CBR4	-162402,15825
chr16:89640647-89640904	chr16	+	89640664	89640884	True	NM_153636,NM_001083314,NM_014427	chr16,chr16,chr16	+,-,+	CPNE7,CHMP1A,CPNE7	1291,83295,1291
chr16:2960136-2960545	chr16	+	2960518	2960594	True	NM_032296,NM_022119,NM_020912	chr16,chr16,chr16	+,-,+	FLYWCH1,PRSS22,FLYWCH1	1385,-52347,1385
chr3:133469092-133470167	chr3	+	133469111	133469852	True	NM_001063,NM_007027	chr3,chr3	+,-	TF,TOPBP1	-4185,-88374
chr16:74808838-74809791	chr16	+	74808949	74809561	True	NM_024306,NM_032268	chr16,chr16	-,+	FA2H,ZNRF1	-220,223353
chr17:6882059-6882403	chr17	+	6882089	6882389	True	NM_000697,NR_029712	chr17,chr17	+,-	ALOX12,MIR195	16994,38681
chr14:94758224-94758685	chr14	+	94758333	94758516	True	NM_001100607,NM_058237,NM_016186	chr14,chr14,chr14	-,+,-	SERPINA10,PPP4R4,SERPINA10	1131,-117742,896
chr14:103008761-103009733	chr14	+	103008792	103009580	True	NM_152326,NR_036192	chr14,chr14	-,+	ANKRD9,MIR4309	-32664,-2862
chr4:331004-331433	chr4	+	331032	331482	True	NM_001137608,NM_003441	chr4,chr4	-,+	ZNF732,ZNF141	-41088,113
chr2:97522065-97522310	chr2	+	97522224	97522342	True	NM_016466,NM_199078	chr2,chr2	-,+	ANKRD39,CNNM3	1464,-40295
chr8:54795382-54795881	chr8	+	54795462	54795550	True	NM_003702,NM_213619	chr8,chr8	+,-	RGS20,ATP6V1H	-2071,-39612
chr2:7058423-7058627	chr2	+	7058449	7058589	True	NR_033997,NM_014746	chr2,chr2	-,+	LOC386597,RNF144A	274,-977
chr8:27363030-27364500	chr8	+	27363334	27364543	True	NM_001979,NM_000742	chr8,chr8	+,-	EPHX2,CHRNA2	-14740,-26521
chrX:37026519-37027080	chrX	+	37026540	37027024	True	NM_006520,NM_001013736	chrX,chrX	-,+	DYNLT3,FAM47C	679915,-159
chrX:37026519-37027080	chrX	+	34961005	34961181	False	NM_152631,NM_031442	chrX,chrX	+,-	FAM47B,TMEM47	-143,-285600
chr20:43935987-43936208	chr20	+	43936024	43936180	True	NM_003833,NM_030592,NM_030590,NM_014276	chr20,chr20,chr20,chr20	-,-,-,+	MATN4,MATN4,MATN4,RBPJL	837,837,837,-584
chr19:12269675-12270279	chr19	+	12269918	12270306	True	NM_003437,NR_037801,NR_037802,NM_145233	chr19,chr19,chr19,chr19	+,-,-,-	ZNF136,ZNF625,ZNF625-ZNF20,ZNF625	3565,-2372,-2372,-2372
chr19:35717969-35718213	chr19	+	35718000	35718114	True	NM_152481,NM_015925	chr19,chr19	-,+	FAM187B,LSR	1564,21444
chrX:16144085-16145389	chrX	+	16144186	16145219	True	NM_005314,NM_003916	chrX,chrX	+,-	GRPR,AP1S2	-2814,-271086
chr6:54176947-54177723	chr6	+	54177127	54177661	True	NM_014464,NM_001003760	chr6,chr6	+,-	TINAG,KLHL31	-3989,-646621
chr9:21528729-21530406	chr9	+	21528822	21530264	True	NR_029505,NM_024013	chr9,chr9	-,+	MIR31,IFNA1	-16638,-88433
chr20:24973597-24973870	chr20	+	24973688	24973856	True	NM_003650,NM_020531	chr20,chr20	+,-	CST7,C20orf3	-43873,-263
chr1:159895706-159896024	chr1	+	159895727	159895903	True	NM_003564,NM_020125	chr1,chr1	-,+	TAGLN2,SLAMF8	-443,-99299
chr11:112019868-112021166	chr11	+	112020189	112021182	True	NM_001562,NM_031275	chr11,chr11	-,+	IL18,TEX12	13710,16912
chr7:44036446-44037087	chr7	+	44036721	44037133	True	NM_175064,NR_003655	chr7,chr7	+,-	SPDYE1,POLR2J4	3355,21665
chr7:44036446-44037087	chr7	-	76692595	76692656	False	NM_006682,NR_028058	chr7,chr7	-,+	FGL2,LOC100132832	136551,-23852
chr7:44036446-44037087	chr7	+	102289988	102290403	False	NM_001031618,NM_001166339,NM_001114403	chr7,chr7,chr7	+,+,-	SPDYE2,SPDYE2L,UPK3BL	368,368,-6750
chr7:44036446-44037087	chr7	+	102190894	102191310	False	NM_001031618,NM_001166339,NM_001097615	chr7,chr7,chr7	+,+,-	SPDYE2,SPDYE2L,POLR2J3	368,368,21808
chr1:228195489-228195915	chr1	+	228195605	228195901	True	NM_033131,NM_003395	chr1,chr1	+,-	WNT3A,WNT9A	-933,-59929
chr20:25062877-25063264	chr20	+	25063027	25063301	True	NM_014588,NM_001114089,NM_199425	chr20,chr20,chr20	-,+,-	VSX1,ENTPD6,VSX1	-260,113037,-260
chr1:47798852-47799485	chr1	+	47799045	47799407	True	NM_001136140,NM_003035,NM_016308	chr1,chr1,chr1	+,-,+	CMPK1,STIL,CMPK1	61,-19226,61
chr11:77735353-77737337	chr11	+	77735599	77737220	True	NM_023930,NM_003251	chr11,chr11	-,+	KCTD14,THRSP	-1279,37686
chr13:20358662-20359154	chr13	+	20359006	20359071	True	NM_001042414,NM_017520,NR_003272	chr13,chr13,chr13	-,+,-	PSPC1,MPHOSPH8,PSPC1	-1923,-151276,-1923
chr5:59967363-59969314	chr5	+	59967636	59969345	True	NR_028509,NM_001145208	chr5,chr5	+,-	PART1,DEPDC1B	-183942,26699
chr7:98920808-98921606	chr7	+	98921285	98921582	True	NM_014891,NM_006409,NM_001190996	chr7,chr7,chr7	-,+,+	PDAP1,ARPC1A,ARPC1A	84774,1913,1913
chr1:52082958-52083292	chr1	+	52083169	52083275	True	NM_148909,NM_148908,NM_001981,NM_024586,NM_148906,NR_036662	chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,+,+,+	OSBPL9,OSBPL9,EPS15,OSBPL9,OSBPL9,OSBPL9	-674,-674,-98174,-674,-674,-674
chr10:46090128-46090385	chr10	+	46090185	46090401	True	NM_001002265,NM_145021,NM_001169106	chr10,chr10,chr10	-,-,+	MARCH8,MARCH8,FAM21C	3,3,132246
chr11:124798673-124799654	chr11	+	124799017	124799686	True	NM_152722,NM_001037558	chr11,chr11	-,+	HEPACAM,HEPN1	6673,-9922
chr16:85056894-85057614	chr16	+	85057123	85057219	True	NM_017740,NM_014732	chr16,chr16	-,+	ZDHHC7,KIAA0513	-11982,4190
chr3:28476655-28477226	chr3	+	28476701	28476782	True	NM_001040432,NM_001134433	chr3,chr3	+,-	ZCWPW2,AZI2	-44775,-86083
chr8:135723832-135724610	chr8	+	135723889	135724647	True	NM_020863,NR_002438,NM_001174157	chr8,chr8,chr8	-,+,-	ZFAT,ZFAT-AS1,ZFAT	696,-113626,696
chr1:95542226-95543022	chr1	+	95542317	95542543	True	NM_001199679,NM_144988	chr1,chr1	+,-	TMEM56,ALG14	15529,-3810
chr1:46015150-46016347	chr1	+	46015172	46016370	True	NM_001202414,NM_153326,NM_006066,NM_001202431,NM_001202413	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	AKR1A1,AKR1A1,AKR1A1,PRDX1,AKR1A1	84,84,84,-26610,84
chr5:120952161-120952407	chr5	+	120952332	120952402	True	NM_001178102,NM_177478	chr5,chr5	-,+	LOX,FTMT	460566,235247
chr8:38459747-38459952	chr8	+	38459852	38459914	True	NR_003129,NM_001146216	chr8,chr8	-,+	RNF5P1,TACC1	-1077,125789
chr17:8816649-8816919	chr17	+	8816654	8816750	True	NM_004822,NM_014308	chr17,chr17	+,-	NTN1,PIK3R5	108108,-820
chr11:126136472-126137710	chr11	+	126136497	126137678	True	NM_001177842,NR_037648,NM_003139,NM_017547,NR_037647	chr11,chr11,chr11,chr11,chr11	-,+,-,+,+	SRPR,FOXRED1,SRPR,FOXRED1,FOXRED1	1249,1361,1249,1256,1256
chr17:71162416-71162914	chr17	+	71162518	71162918	True	NM_001098832,NM_001050	chr17,chr17	-,+	FAM104A,SSTR2	65665,-1409
chrX:67992927-67994609	chrX	+	67992992	67994424	True	NM_002547,NM_004429	chrX,chrX	-,+	OPHN1,EFNB1	-339693,54415
chr5:54455138-54455953	chr5	+	54455277	54455979	True	NR_029960,NM_001008397	chr5,chr5	-,+	MIR449A,GPX8	10521,4
chr12:5248586-5249297	chr12	+	5248603	5249141	True	NM_006422,NM_002234	chr12,chr12	-,+	AKAP3,KCNA5	-494260,-95569
chr20:59826224-59826908	chr20	+	59826282	59826746	True	NM_001794,NR_031658	chr20,chr20	+,-	CDH4,MIR1257	812,702022
chr16:77464883-77465468	chr16	+	77465131	77465508	True	NM_001129979,NM_199355	chr16,chr16	+,-	SYCE1L,ADAMTS18	-231833,3554
chr19:41258096-41258367	chr19	+	41258302	41258366	True	NM_198476,NM_004596	chr19,chr19	-,+	C19orf54,SNRPA	-2474,-1594
chr19:10400119-10400399	chr19	+	10400125	10400347	True	NM_022377,NM_001544,NM_001039132,NM_003259,NM_001103167	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	ICAM4,ICAM4,ICAM4,ICAM5,ZGLP1	-2526,-2526,-2526,307,19936
chr15:89768416-89769718	chr15	+	89768610	89769665	True	NM_001113378,NM_000326	chr15,chr15	+,-	FANCI,RLBP1	17528,-3688
chr17:77770094-77770506	chr17	+	77770103	77770443	True	NM_005189,NM_020649	chr17,chr17	+,-	CBX2,CBX8	-18177,522
chr17:5971637-5972523	chr17	+	5971756	5972457	True	NM_001033054,NM_015253	chr17,chr17	-,+	AIPL1,WSCD1	366112,1476
chr15:41050060-41050996	chr15	+	41050762	41051000	True	NM_018145,NM_005258	chr15,chr15	-,+	FAM82A2,GCHFR	-3304,5284
chr15:34826138-34827858	chr15	+	34826147	34827486	True	NR_036050,NM_175741,NM_001023567,NR_036261	chr15,chr15,chr15,chr15	-,+,-,-	MIR1233-1,C15orf55,GOLGA8B,MIR1233-2	-5575,-188132,786,-5575
chr15:34826138-34827858	chr15	+	34679926	34681265	False	NM_175741,NR_036050,NM_181077,NR_036261	chr15,chr15,chr15,chr15	+,-,-,-	C15orf55,MIR1233-1,GOLGA8A,MIR1233-2	-41911,-5575,786,-5575
chr10:15138449-15138968	chr10	+	15138465	15139005	True	NM_183005,NM_001097590,NM_006414,NM_001039844,NM_153244	chr10,chr10,chr10,chr10,chr10	+,+,+,-,-	RPP38,RPP38,RPP38,ACBD7,C10orf111	176,176,176,-7690,363
chr12:4826904-4828341	chr12	+	4827019	4828340	True	NM_006422,NM_017417	chr12,chr12	-,+	AKAP3,GALNT8	-72676,1411
chrX:47078629-47078985	chrX	+	47078806	47078999	True	NM_006201,NR_024235,NM_033018,NM_001170460	chrX,chrX,chrX,chrX	+,-,+,+	CDK16,NDUFB11,CDK16,CDK16	-781,-74197,-1329,3417
chr17:42737898-42738181	chr17	+	42737956	42738194	True	NM_001099225,NM_001145080	chr17,chr17	-,+	CCDC43,C17orf104	29022,-4253
chr11:76471457-76472620	chr11	+	76471519	76472639	True	NM_015516,NR_024042	chr11,chr11	+,-	TSKU,GUCY2E	21645,-38686
chr20:33870085-33870571	chr20	+	33870116	33870333	True	NM_006690,NM_002212,NM_181466,NM_181468,NM_178468	chr20,chr20,chr20,chr20,chr20	+,-,-,-,-	MMP24,EIF6,EIF6,EIF6,FAM83C	-55637,2312,2312,2224,9943
chr1:115251912-115252502	chr1	+	115252114	115252364	True	NM_003176,NM_002524	chr1,chr1	+,-	SYCP1,NRAS	145090,7207
chr15:89074585-89074861	chr15	+	89074589	89074889	True	NM_001144074,NM_176805	chr15,chr15	-,+	DET1,MRPS11	15073,-63956
chr17:34088213-34088660	chr17	+	34088585	34088693	True	NM_145272,NM_139285	chr17,chr17	+,-	C17orf50,GAS2L2	-720,-8688
chr17:42203819-42204950	chr17	+	42204352	42204422	True	NM_001015053,NM_001171251,NM_005474	chr17,chr17,chr17	-,+,-	HDAC5,C17orf53,HDAC5	-3338,14851,-3338
chr10:45490764-45491547	chr10	+	45490796	45491579	True	NM_001039380,NM_006963	chr10,chr10	-,+	C10orf25,ZNF22	4948,4693
chr19:11529049-11529311	chr19	+	11529057	11529311	True	NM_001001329,NM_001161616,NM_001035223	chr19,chr19,chr19	+,-,-	PRKCSH,RGL3,RGL3	16957,757,757
chr20:44334867-44335132	chr20	+	44334893	44335101	True	NM_172005,NM_172006,NM_172131	chr20,chr20,chr20	+,-,-	WFDC13,WFDC10B,WFDC10B	-4289,-1235,-1235
chr5:37252361-37252798	chr5	+	37252534	37252802	True	NM_018034,NM_023073	chr5,chr5	+,-	WDR70,C5orf42	126609,-3004
chr20:35724601-35726049	chr20	+	35724968	35725930	True	NM_002895,NM_183404,NM_001135771	chr20,chr20,chr20	-,-,+	RBL1,RBL1,RPN2	-558,-558,81525
chr16:81346861-81347187	chr16	+	81347066	81347215	True	NM_001076780,NM_022041	chr16,chr16	-,+	PKD1L2,GAN	-93091,1355
chr19:11914940-11916146	chr19	+	11915056	11915956	True	NM_152357,NM_152356,NM_001080493	chr19,chr19,chr19	+,+,-	ZNF440,ZNF491,ZNF823	9150,-5716,-65296
chr3:131215934-131217400	chr3	+	131216029	131217241	True	NM_007208,NR_033268	chr3,chr3	-,+	MRPL3,NUDT16	4674,-115456
chr10:18098060-18098493	chr10	+	18098172	18098526	True	NM_002438,NM_014241,NM_001009567	chr10,chr10,chr10	+,-,+	MRC1,PTPLA,MRC1L1	15,-438799,15
chr10:18098060-18098493	chr10	+	17851182	17851536	False	NM_002438,NM_014241,NM_001009567	chr10,chr10,chr10	+,-,+	MRC1,PTPLA,MRC1L1	15,-191809,15
chr2:48812545-48813182	chr2	+	48812698	48813179	True	NM_001198594,NM_000233	chr2,chr2	+,-	STON1-GTF2A1L,LHCGR	-5035,169751
chr16:85220994-85221220	chr16	+	85221048	85221264	True	NR_033984,NM_198491	chr16,chr16	+,-	LOC400548,FAM92B	-50345,-74934
chr2:14772407-14772633	chr2	+	14772484	14772558	True	NM_015909,NM_145175	chr2,chr2	-,+	NBAS,FAM84A	928946,251
chr1:153581825-153583341	chr1	+	153582001	153583180	True	NM_080388,NM_006271,NM_020672	chr1,chr1,chr1	-,+,-	S100A16,S100A1,S100A14	2385,17692,5661
chr1:9007436-9008062	chr1	+	9007445	9007914	True	NM_001215,NM_001428	chr1,chr1	+,-	CA6,ENO1	-1574,-68294
chr20:33757221-33758216	chr20	+	33757220	33758178	True	NM_006404,NR_026728	chr20,chr20	+,-	PROCR,EDEM2	1595,-22059
chr19:39111253-39112998	chr19	+	39112135	39112507	True	NM_013234,NM_007181,NM_001042600	chr19,chr19,chr19	+,-,-	EIF3K,MAP4K1,MAP4K1	-2473,-3492,-3492
chr1:185286007-185286363	chr1	+	185286020	185286310	True	NM_017673,NM_006469	chr1,chr1	+,-	SWT1,IVNS1ABP	-159780,201
chr2:162163604-162164496	chr2	+	162163778	162164498	True	NM_001935,NM_005805	chr2,chr2	-,+	DPP4,PSMD14	766604,287
chr17:3500336-3500631	chr17	+	3500356	3500680	True	NM_080705,NM_080706,NM_018727,NM_001031681	chr17,chr17,chr17,chr17	-,-,-,+	TRPV1,TRPV1,TRPV1,CTNS	-1231,-4185,-20,39081
chr6:15013278-15014165	chr6	+	15013311	15014067	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	232459,649272
chr9:34330121-34330679	chr9	+	34330451	34330666	True	NM_147173,NM_147172,NM_194313,NM_001161	chr9,chr9,chr9,chr9	+,+,-,+	NUDT2,NUDT2,KIF24,NUDT2	-1006,-1006,-1253,-1006
chr2:176964478-176964767	chr2	+	176964478	176964608	True	NM_001080458,NM_000523,NM_021192,NM_021193	chr2,chr2,chr2,chr2	-,+,+,+	EVX2,HOXD13,HOXD11,HOXD12	-15788,-6997,7475,1
chr9:95817790-95818877	chr9	+	95817833	95818653	True	NM_004148,NM_145006	chr9,chr9	-,+	NINJ1,SUSD3	77967,2335
chr19:54987754-54988463	chr19	+	54987754	54988332	True	NM_002288,NM_145057	chr19,chr19	+,-	LAIR2,CDC42EP5	25680,-3332
chr3:123598240-123598908	chr3	+	123598375	123598923	True	NM_053025,NM_053027,NM_053026,NR_028136,NM_053028	chr3,chr3,chr3,chr3,chr3	-,-,-,+,-	MYLK,MYLK,MYLK,KALRN,MYLK	4287,4287,4287,214634,4287
chr2:37482772-37483970	chr2	+	37482771	37483983	True	NM_144736,NM_005760	chr2,chr2	+,-	C2orf56,CEBPZ	-24048,-24031
chr12:32277630-32278781	chr12	+	32277837	32278664	True	NM_001714,NM_001013699	chr12,chr12	+,-	BICD1,H3F3C	-17703,-332662
chr3:94673859-94675208	chr3	+	94673902	94675041	True	NR_015400,NM_001195643	chr3,chr3	+,-	LOC255025,DHFRL1	-16847,-891835
chr7:128051249-128051826	chr7	+	128051260	128051428	True	NM_000883,NM_001142576,NM_001142574,NM_001142575,NM_001142573,NM_183243,NM_001098786,NM_001102605	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,-,+,-	IMPDH1,IMPDH1,IMPDH1,IMPDH1,IMPDH1,IMPDH1,C7orf68,IMPDH1	-1224,-1224,-5236,-5236,-5236,-1224,44455,-1224
chr16:28519564-28520476	chr16	+	28519670	28519750	True	NM_018690,NM_145659	chr16,chr16	+,-	APOBR,IL27	-13728,-1515
chr18:46988398-46989636	chr18	+	46988497	46989638	True	NM_017653,NR_031720	chr18,chr18	-,+	DYM,MIR1539	-1418,24104
chr1:158146889-158147089	chr5	+	95242462	95249504	False	NR_026936,NM_012081	chr5,chr5	+,-	C5orf27,ELL2	-61566,55309
chr1:158146889-158147089	chr1	+	158146915	158147117	True	NR_033946,NM_001766	chr1,chr1	-,+	LOC646268,CD1D	-36485,2619
chr5:40680051-40680278	chr5	+	40680125	40680319	True	NM_012382,NM_000958	chr5,chr5	-,+	TTC33,PTGER4	75803,-144
chr4:78079467-78079817	chr4	+	78079649	78079815	True	NM_004354,NM_006835	chr4,chr4	+,-	CCNG2,CCNI	-1343,-82524
chr17:75178808-75180026	chr17	+	75178856	75179975	True	NM_001144001,NR_036200	chr17,chr17	+,-	SEC14L1,MIR4316	1319,213214
chr8:19171198-19171492	chr8	+	19171197	19171317	True	NM_001174160,NM_001174159,NM_001130518,NM_022071	chr8,chr8,chr8,chr8	+,+,-,+	SH2D4A,SH2D4A,CSGALNACT1,SH2D4A	-167,169,288789,-167
chr19:51455418-51455727	chr19	+	51455432	51455724	True	NM_001077492,NM_012427,NM_005551,NM_001077491	chr19,chr19,chr19,chr19	-,-,+,-	KLK5,KLK5,KLK2,KLK5	670,670,-78794,670
chr1:224805311-224805725	chr1	+	224805352	224805620	True	NM_152495,NM_025160	chr1,chr1	+,-	CNIH3,WDR26	-1231,-183351
chr11:75483748-75484868	chr11	+	75484130	75484852	True	NM_032564,NM_207577	chr11,chr11	+,-	DGAT2,MAP6	-4409,-104651
chr7:117874565-117875386	chr7	+	117874706	117874920	True	NM_033427,NM_019644	chr7,chr7	-,+	CTTNBP2,ANKRD7	-361145,-10054
chr3:108674294-108675144	chr3	+	108674478	108674910	True	NM_005459,NM_016388	chr3,chr3	-,+	GUCA1C,TRAT1	-1801,-132903
chr19:55359590-55360059	chr19	+	55359855	55359941	True	NM_006737,NM_001127255	chr19,chr19	+,-	KIR3DL2,NLRP7	1956,98982
chr1:3528489-3529106	chr1	+	3528563	3529113	True	NM_001409,NM_182752	chr1,chr1	-,+	MEGF6,TPRG1L	-504,12442
chr12:56223423-56223790	chr12	+	56223449	56223772	True	NR_036478,NR_036479,NR_036476,NR_036477,NM_032364	chr12,chr12,chr12,chr12,chr12	+,+,+,+,-	LOC440104,LOC440104,LOC440104,LOC440104,DNAJC14	-108,-108,-108,-108,-29
chr17:7312051-7313408	chr17	+	7312790	7313434	True	NM_020795,NR_037719,NM_152766	chr17,chr17,chr17	+,-,-	NLGN2,C17orf61-PLSCR3,C17orf61	-1339,-5340,-5340
chr11:71955745-71956181	chr11	+	71955787	71956115	True	NM_005169,NM_001567	chr11,chr11	-,+	PHOX2A,INPPL1	-567,-19956
chr16:56553165-56553535	chr16	+	56553263	56553494	True	NM_031885,NM_032935	chr16,chr16	-,+	BBS2,MT4	565,45466
chr12:3601830-3602116	chr12	+	3601937	3602161	True	NM_019854,NM_001144958	chr12,chr12	+,-	PRMT8,EFCAB4B	-1563,260255
chr13:114897132-114897402	chr13	+	114897232	114897396	True	NM_001078645	chr13	+	CDC16	102965
chr14:81711339-81712974	chr14	+	81711953	81712887	True	NM_201595,NM_000369	chr14,chr14	-,+	GTF2A1,TSHR	-24378,-290139
chr20:18479459-18480323	chr20	+	18479576	18480126	True	NM_006606,NM_006363,NM_032986,NM_032985,NM_001172746,NM_001172745	chr20,chr20,chr20,chr20,chr20,chr20	-,+,+,+,+,+	RBBP9,SEC23B,SEC23B,SEC23B,SEC23B,SEC23B	-1689,8061,8061,8061,8083,8480
chr20:57465765-57465991	chr20	+	57465820	57466004	True	NM_001077489,NM_001077488,NM_000516,NR_002785,NR_003259,NM_080426	chr20,chr20,chr20,chr20,chr20,chr20	+,+,+,-,+,+	GNAS,GNAS,GNAS,GNAS-AS1,GNAS,GNAS	421,421,421,-39862,-1691,421
chr5:140222313-140222592	chr5	+	140222376	140222622	True	NM_014005,NM_002109,NM_031856,NM_031857,NM_018910,NM_018911,NM_031852	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,-,+,+,+,+,+	PCDHA9,HARS,PCDHA8,PCDHA9,PCDHA7,PCDHA8,PCDHA7	4734,-151405,-1520,4734,-8458,-1520,-8458
chr14:21208954-21209564	chr14	+	21209050	21209592	True	NM_198232,NM_006683	chr14,chr14	-,+	RNASE1,EDDM3A	61016,4506
chr15:34785071-34786529	chr15	+	34785141	34786529	True	NM_175741,NR_036050	chr15,chr15	+,-	C15orf55,MIR1233-1	-147127,34093
chr8:33876604-33877301	chr8	+	33876721	33877062	True	NM_032509,NM_024025	chr8,chr8	+,-	MAK16,DUSP26	-534094,-419282
chr18:49866529-49866757	chr18	+	49866534	49866756	True	NM_005215,NM_016626	chr18,chr18	+,-	DCC,MEX3C	-43,-1142483
chr3:19988338-19988620	chr3	+	19988427	19988614	True	NM_144715,NM_004162	chr3,chr3	-,+	EFHB,RAB5A	-12721,-21
chr14:24456498-24457127	chr14	+	24456631	24457104	True	NR_023922,NM_198083	chr14,chr14	-,+	C14orf167,DHRS4L2	-32333,922
chr15:49254073-49254408	chr15	+	49254081	49254431	True	NM_014335,NM_203349	chr15,chr15	+,-	EID1,SHC4	-83842,1260
chr9:133454491-133454769	chr9	+	133454494	133454778	True	NR_027440,NM_003934	chr9,chr9	-,+	LOC100272217,FUBP3	153,181
chr16:2847563-2848115	chr16	+	2847563	2847933	True	NM_152891,NM_001135086	chr16,chr16	-,+	PRSS33,PRSS41	-10855,552
chr19:55680507-55680943	chr19	+	55680525	55680667	True	NM_178837,NM_017729	chr19,chr19	-,+	C19orf51,EPS8L1	-2507,-88823
chr9:5653756-5654337	chr9	+	5653884	5653951	True	NM_024896,NM_020829	chr9,chr9	-,+	ERMP1,KIAA1432	179183,2631
chr6:31160997-31161361	chr6_dbb_hap3	+	2458273	2458337	False	NR_026816,NR_026791	chr6_dbb_hap3,chr6_dbb_hap3	-,+	PSORS1C3,HCG27	-15455,4339
chr6:31160997-31161361	chr6	+	31161131	31161221	True	NR_026816,NR_026791	chr6,chr6	-,+	PSORS1C3,HCG27	-15455,4315
chr6:31160997-31161361	chr6_ssto_hap7	+	2496076	2496140	False	NR_026816,NR_026791	chr6_ssto_hap7,chr6_ssto_hap7	-,+	PSORS1C3,HCG27	-15446,4341
chr6:31160997-31161361	chr6_cox_hap2	+	2675906	2675970	False	NR_026816,NR_026791	chr6_cox_hap2,chr6_cox_hap2	-,+	PSORS1C3,HCG27	-15459,4339
chr10:33200476-33201281	chr10	+	33200487	33201067	True	NM_024688,NM_033668	chr10,chr10	+,-	C10orf68,ITGB1	-343887,23469
chr14:65008008-65008243	chr14	+	65008068	65008250	True	NM_006977,NM_021979,NM_172365	chr14,chr14,chr14	-,+,+	ZBTB25,HSPA2,C14orf50	-37514,-933,8369
chr1:24884004-24885662	chr1	+	24884073	24885607	True	NM_001199012,NM_001010980	chr1,chr1	-,+	C1orf201,C1orf130	-142486,-1557
chr14:105766393-105766705	chr14	+	105766397	105766753	True	NM_001519,NM_001100913	chr14,chr14	-,+	BRF1,PACS2	626,14327
chr1:42847947-42848850	chr1	+	42847985	42848896	True	NM_001198850,NM_173642	chr1,chr1	-,+	FOXJ3,RIMKLA	-46437,-1581
chr7:129250127-129250712	chr7	+	129250342	129250688	True	NR_029614,NM_005011	chr7,chr7	-,+	MIR182,NRF1	159694,866
chr14:74419671-74421266	chr14	+	74419891	74420947	True	NM_182480,NM_152445,NM_182476	chr14,chr14,chr14	+,-,+	COQ6,FAM161B,COQ6	-3300,-3056,-2987
chr3:172164226-172165676	chr3	+	172164527	172165531	True	NM_018098,NM_004122,NM_198407	chr3,chr3,chr3	+,-,-	ECT2,GHSR,GHSR	306766,765,765
chr10:88412412-88412706	chr10	+	88412447	88412669	True	NM_033282,NM_015045,NM_001030015	chr10,chr10,chr10	+,-,+	OPN4,WAPAL,OPN4	1644,-130906,1644
chr19:51517509-51517794	chr19	+	51517508	51517670	True	NM_012315,NM_145888,NM_001077500,NM_002776,NM_014441	chr19,chr19,chr19,chr19,chr19	-,-,-,-,+	KLK9,KLK10,KLK10,KLK10,SIGLEC9	-4618,5334,5811,5662,110466
chr9:136856081-136856290	chr9	+	136856084	136856302	True	NM_003371,NR_015427,NM_001134398	chr9,chr9,chr9	-,+,-	VAV2,NCRNA00094,VAV2	1194,34258,1194
chr5:114962301-114963312	chr5	+	114962320	114963202	True	NM_181836,NM_001284,NM_001164468,NM_001164469	chr5,chr5,chr5,chr5	-,+,-,-	TMED7,AP3S1,TMED7-TICAM2,TMED7-TICAM2	-444,214416,-444,-444
chr11:64404924-64405358	chr11	+	64404950	64405336	True	NM_153378,NM_138734	chr11,chr11	+,-	SLC22A12,NRXN2	-46719,5501
chr2:131307210-131307421	chr2	+	131307272	131307394	True	NR_027313,NR_033930,NR_027314	chr2,chr2,chr2	-,-,-	LOC150527,LOC646743,LOC150527	127,144,124
chr2:131307210-131307421	chr2	-	131328495	131328617	False	NR_027313,NR_033930,NR_027314	chr2,chr2,chr2	+,+,+	LOC150527,LOC646743,LOC150527	-127,-144,-124
chr3:183271063-183272672	chr3	+	183271336	183272342	True	NM_130446,NM_017644	chr3,chr3	-,+	KLHL6,KLHL24	1207,81068
chr3:169522710-169523392	chr3	+	169522812	169523404	True	NM_001080460,NM_001172779,NM_153353,NM_001172780	chr3,chr3,chr3,chr3	+,-,-,-	LRRIQ4,LRRC34,LRRC34,LRRC34	16305,7220,7220,7220
chr19:9469550-9471114	chr19	+	9469603	9470889	True	NM_198535,NM_003451	chr19,chr19	-,+	ZNF699,ZNF177	-53808,2806
chr3:66023109-66023744	chr3	+	66023225	66023717	True	NM_173471,NM_015520,NM_001033057,NM_004742	chr3,chr3,chr3,chr3	+,-,-,-	SLC25A26,MAGI1,MAGI1,MAGI1	95567,842,842,842
chr19:49341340-49342088	chr19	+	49341542	49342135	True	NM_014330,NM_016246	chr19,chr19	+,-	PPP1R15A,HSD17B14	33513,-1608
chr15:41787015-41787226	chr15	+	41787041	41787259	True	NM_002220,NM_001135685	chr15,chr15	+,-	ITPKA,LTK	-970,18876
chrX:134970305-134970542	chrX	+	134970331	134970503	True	NM_001017438,NM_018666	chrX,chrX	-,+	CT45A6,SAGE1	791,5281
chrX:134970305-134970542	chrX	+	134953081	134953253	False	NM_001007551,NM_018666,NM_001172288	chrX,chrX,chrX	-,+,-	CT45A5,SAGE1,CT45A5	791,22531,791
chrX:134970305-134970542	chrX	+	134935818	134935994	False	NM_018666,NM_001017436	chrX,chrX	+,-	SAGE1,CT45A4	39790,791
chrX:134970305-134970542	chrX	-	134866954	134867130	False	NM_152582,NM_001017436	chrX,chrX	+,+	CT45A2,CT45A4	-791,-791
chrX:134970305-134970542	chrX	-	134884228	134884400	False	NM_001017436,NM_001017435	chrX,chrX	-,+	CT45A4,CT45A3	52385,-791
chr19:45313115-45313634	chr19	+	45313523	45313600	True	NM_001013257,NM_005581,NR_027754	chr19,chr19,chr19	+,+,-	BCAM,BCAM,CEACAM22P	-1236,-1236,-253373
chr11:65793666-65794638	chr11	+	65793766	65794278	True	NM_001323,NM_053054	chr11,chr11	+,-	CST6,CATSPER1	-14355,-52
chr14:88788670-88789042	chr14	+	88788798	88788934	True	NM_021161,NM_001040428,NM_138317	chr14,chr14,chr14	-,+,-	KCNK10,SPATA7,KCNK10	4372,63053,709
chr17:4698148-4699098	chr17	+	4698772	4698958	True	NM_002798,NM_001014985,NM_001144939,NM_001144941,NM_001144940,NM_182566	chr17,chr17,chr17,chr17,chr17,chr17	+,+,-,-,-,-	PSMB6,GLTPD2,VMO1,VMO1,VMO1,VMO1	498,-6580,-9043,-9043,-9043,-9043
chr20:30327374-30329273	chr20	+	30327391	30328742	True	NM_012112,NM_138578	chr20,chr20	+,-	TPX2,BCL2L1	-541,-16735
chr1:207992467-207994460	chr1	+	207992826	207994046	True	NR_029518,NR_026817	chr1,chr1	-,+	MIR29B2,LOC148696	-16958,-1153
chr22:32602933-32603497	chr22	+	32602999	32603433	True	NM_001098527,NM_006604,NM_001159546,NM_001159545	chr22,chr22,chr22,chr22	-,+,-,-	RFPL2,RFPL3,RFPL2,RFPL2	-3535,147438,-4462,-2281
chr10:96957103-96958330	chr10	+	96958008	96958106	True	NM_207321,NM_020992	chr10,chr10	+,-	C10orf129,PDLIM1	-4102,92729
chr2:85803987-85804747	chr2	+	85803996	85804762	True	NM_003761,NM_001142269,NM_006634	chr2,chr2,chr2	+,-,+	VAMP8,GGCX,VAMP5	32,-15339,6768
chr1:150567208-150567598	chr1	+	150567332	150567596	True	NM_182763,NR_036211	chr1,chr1	-,+	MCL1,MIR4257	-15118,-42984
chr7:150973158-150974094	chr7	+	150973289	150974084	True	NM_001003802,NR_030407,NM_003078	chr7,chr7,chr7	-,+,-	SMARCD3,MIR671,SMARCD3	-214,-37833,197
chr5:156882632-156883756	chr5	+	156882686	156883799	True	NM_001099287,NM_001001343,NM_001172292	chr5,chr5,chr5	+,-,+	NIPAL4,FNDC9,NIPAL4	3227,-109957,3227
chr12:7011226-7012125	chr12	+	7011654	7012158	True	NM_032641,NM_201650,NM_006992,NM_001135217	chr12,chr12,chr12,chr12	-,+,+,+	SPSB2,LRRC23,LRRC23,LRRC23	-29133,1738,1738,1738
chr20:3799637-3800069	chr20	+	3799671	3799834	True	NM_001204447,NM_001204446,NM_001810,NM_018347	chr20,chr20,chr20,chr20	+,+,-,+	C20orf29,C20orf29,CENPB,C20orf29	1336,1336,-32334,1336
chrX:70938540-70938846	chrX	+	70938543	70938821	True	NR_034005,NM_001145140,NM_001145139	chrX,chrX,chrX	+,-,-	FLJ46446,CXorf49,CXorf49B	-21548,-408,-408
chrX:70938540-70938846	chrX	-	70982453	70982731	False	NR_001568,NM_001145140,NM_001145139	chrX,chrX,chrX	-,+,+	BCYRN1,CXorf49,CXorf49B	-33491,408,408
chr19:55221486-55221923	chr19	+	55221630	55221924	True	NR_003061,NM_001127255,NM_145057	chr19,chr19,chr19	+,-,-	LILRP2,NLRP7,CDC42EP5	-2080,236999,-237208
chr1:23961592-23962001	chr1	+	23961655	23961930	True	NM_002167,NR_027042	chr1,chr1	-,+	ID3,MDS2	-75333,-7882
chr9:4807610-4809468	chr9	+	4808051	4809310	True	NM_005772,NM_001199853	chr9,chr9	+,-	RCL1,AK3	-15270,-66008
chr1:157774942-157776625	chr1	+	157775164	157776465	True	NM_001159397,NM_018240	chr1,chr1	-,+	FCRL1,KIRREL	13526,186597
chr7:149317604-149318373	chr7	+	149317760	149318292	True	NM_032534,NR_027788,NR_027789	chr7,chr7,chr7	+,-,-	KRBA1,ZNF767,ZNF767	93855,3639,3639
chr14:53169656-53170145	chr14	+	53169861	53170145	True	NM_002806,NM_014584	chr14,chr14	+,-	PSMC6,ERO1L	3750,-7442
chr19:17961122-17961564	chr19	+	17961181	17961539	True	NM_000980,NR_001593,NM_000215	chr19,chr19,chr19	+,+,-	RPL18A,RPL18AP3,JAK3	9191,9187,-2340
chr21:45346323-45346764	chr21	+	45346342	45346492	True	NR_026961,NM_001037553	chr21,chr21	-,+	LOC284837,AGPAT3	-113894,-1114
chr17:45929681-45930175	chr17	+	45929832	45930202	True	NM_199262,NM_033413	chr17,chr17	-,+	SP6,LRRC46	3088,-20893
chr2:74118316-74119921	chr2	+	74118353	74119903	True	NM_001199893,NM_001615,NM_003584	chr2,chr2,chr2	+,+,-	ACTG2,ACTG2,DUSP11	189,189,-111069
chr17:47442707-47444487	chr17	+	47442706	47444398	True	NM_014897,NR_034161,NM_001145365	chr17,chr17,chr17	-,+,-	ZNF652,FLJ40194,ZNF652	-2871,-117152,-3230
chr8:57359270-57359600	chr8	+	57359450	57359592	True	NM_001135690,NM_024300,NM_006211	chr8,chr8,chr8	-,+,-	PENK,CHCHD7,PENK	-168,-235187,-857
chr22:26986324-26987289	chr22	+	26986323	26986992	True	NM_003595,NM_001886	chr22,chr22	-,+	TPST2,CRYBA4	-234,30935
chr6:3120427-3121131	chr6	+	3120555	3121079	True	NR_026648,NR_026649,NR_026650,NM_001069,NM_004332	chr6,chr6,chr6,chr6,chr6	+,+,+,-,+	BPHL,BPHL,BPHL,TUBB2A,BPHL	-1680,-1680,-1680,36754,-1680
chr12:72341403-72341708	chr12	+	72341466	72341628	True	NM_173353,NR_024072	chr12,chr12	+,-	TPH2,MRS2P2	-8891,-96703
chr14:21136743-21137809	chr14	+	21136914	21137528	True	NM_001145,NM_001001968	chr14,chr14	+,-	ANG,OR6S1	14807,-27064
chr15:59730735-59730972	chr15	+	59730897	59731005	True	NM_152450,NM_004998	chr15,chr15	+,-	FAM81A,MYO1E	-576,-65826
chr12:51442994-51444096	chr12	+	51442993	51443688	True	NM_001174125,NM_015416,NM_001024668	chr12,chr12,chr12	-,+,+	SLC11A2,LETMD1,LETMD1	-20935,-963,-963
chr2:23677427-23679149	chr2	+	23677541	23679109	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	470875,-69294
chr7:2717557-2718549	chr7	+	2717687	2718533	True	NM_133463,NM_152743	chr7,chr7	+,-	AMZ1,BRAT1	629,-122295
chr7:2717557-2718549	chr7	-	2571810	2572445	False	NM_001040168,NM_152743	chr7,chr7	+,-	LFNG,BRAT1	-12382,22998
chr19:35775805-35776896	chr19	+	35775905	35776573	True	NM_001199216,NM_152481,NM_002361,NM_080600,NM_021175	chr19,chr19,chr19,chr19,chr19	+,-,+,+,+	MAG,FAM187B,MAG,MAG,HAMP	6415,-56277,6415,6415,-2546
chr1:158260600-158262457	chr1	+	158260624	158262073	True	NM_001765,NM_001764	chr1,chr1	+,-	CD1C,CD1B	-1112,39300
chr4:128705291-128705529	chr4	+	128705325	128705553	True	NM_014278,NM_152778	chr4,chr4	+,-	HSPA4L,MFSD8	-1929,181642
chr1:149223918-149224145	chr1	+	149223927	149224008	True	NM_001024599,NR_027002	chr1,chr1	-,+	HIST2H2BF,LOC388692	175278,55467
chr3:12335351-12336314	chr3	+	12335487	12336120	True	NM_003256,NM_005037,NM_138711,NM_138712	chr3,chr3,chr3,chr3	-,+,+,+	TIMP4,PPARG,PPARG,PPARG	-134636,-6190,-5103,-6190
chr12:71011621-71012696	chr12	+	71011771	71012717	True	NM_002837,NM_014505	chr12,chr12	-,+	PTPRB,KCNMB4	-8147,-251771
chr5:16609298-16609740	chr5	+	16609370	16609772	True	NM_001034850,NM_006317	chr5,chr5	-,+	FAM134B,BASP1	7396,607977
chr19:54415476-54415984	chr19	+	54415541	54415961	True	NM_144687,NM_031896	chr19,chr19	-,+	NLRP12,CACNG7	-87893,29
chr11:63273720-63273996	chr11	+	63273780	63274038	True	NM_001142536,NM_001142537,NM_001142535,NM_033101,NM_001142538,NM_054108	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,-	LGALS12,LGALS12,LGALS12,LGALS12,LGALS12,HRASLS5	-307,1420,-307,-307,1420,-15100
chrX:18692780-18693151	chrX	+	18692796	18693161	True	NM_000330,NM_006240	chrX,chrX	-,+	RS1,PPEF1	-2573,15883
chr9:109623729-109624657	chr9	+	109623979	109624603	True	NR_031752,NM_021224	chr9,chr9	-,+	MIR548Q,ZNF462	224163,774
chr2:193631834-193633688	chr2	+	193631906	193633634	True	NR_002769,NM_016192	chr2,chr2	+,-	PCGEM1,TMEFF2	-17393,-572262
chr13:47470759-47471476	chr13	+	47470778	47471494	True	NM_001164213,NM_000621,NM_001165947	chr13,chr13,chr13	+,-,-	LRCH1,HTR2A,HTR2A	-343546,7,7
chr22:20794975-20795391	chr22	+	20795053	20795351	True	NM_182895,NM_153334,NR_003253	chr22,chr22,chr22	-,-,+	SCARF2,SCARF2,ZNF74	-2907,-2907,-46624
chr10:29921138-29921875	chr10	+	29921468	29921874	True	NM_021738,NR_003930	chr10,chr10	-,+	SVIL,LOC387647	2077,-223030
chr5:177020181-177020661	chr5	+	177020413	177020649	True	NR_024019,NM_017510,NM_007255	chr5,chr5,chr5	-,+,+	FAM193B,TMED9,B4GALT7	-38865,-1251,6469
chr15:90724458-90725172	chr15	+	90724816	90725142	True	NM_020210,NM_006384	chr15,chr15	+,-	SEMA4B,CIB1	3009,52188
chr17:47288567-47289097	chr17	+	47288585	47288927	True	NM_016428,NM_001198756,NM_001198755,NM_001198754,NM_001135186,NM_031498	chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,-,+,-	ABI3,GNGT2,GNGT2,GNGT2,ABI3,GNGT2	-1047,-1823,-1823,-649,-1047,-1842
chr2:242624467-242625375	chr2	+	242624995	242625428	True	NM_012145,NR_033255,NM_001165031,NM_032329	chr2,chr2,chr2,chr2	-,-,-,+	DTYMK,DTYMK,DTYMK,ING5	1010,1010,1010,16027
chr1:206227959-206228858	chr1	+	206228200	206228890	True	NM_000707,NM_001007544	chr1,chr1	+,-	AVPR1B,C1orf186	-3968,59807
chr4:41640232-41640867	chr4	+	41640232	41640891	True	NM_001112720,NM_003924	chr4,chr4	+,-	LIMCH1,PHOX2B	-25372,110147
chr2:133420481-133420937	chr2	+	133420515	133420800	True	NM_001077427,NM_001508,NM_144586	chr2,chr2,chr2	-,+,-	LYPD1,GPR39,LYPD1	8325,-246420,7736
chr2:102091297-102091687	chr2	+	102091307	102091725	True	NM_017546,NM_001145664	chr2,chr2	+,-	C2orf29,RFX8	-222013,-142
chr2:231061771-231063612	chr2	+	231062683	231063643	True	NM_004509,NM_001005176	chr2,chr2	-,+	SP110,SP140	21234,26801
chr8:11185144-11185469	chr8	+	11185251	11185511	True	NM_054028,NM_173683	chr8,chr8	+,-	AMAC1L2,XKR6	2983,-126376
chr1:157513424-157514220	chr1	+	157513556	157514252	True	NM_001195388,NM_031281,NR_001560	chr1,chr1,chr1	-,-,+	FCRL5,FCRL5,CYCSP52	8108,8108,-415460
chr9:34922176-34922994	chr9	+	34922366	34922958	True	NR_024481,NM_015297	chr9,chr9	-,+	C9orf144,KIAA1045	-83783,35233
chr2:200772945-200773625	chr2	+	200772988	200773655	True	NM_001039693,NM_153689	chr2,chr2	-,+	C2orf60,C2orf69	46855,2323
chr9:99329270-99329577	chr9	+	99329483	99329545	True	NM_001077181,NM_014282	chr9,chr9	-,+	CDC14B,HABP4	-280,-117120
chr22:24407495-24407720	chr22	+	24407703	24407765	True	NR_003082,NM_012295,NM_001201429,NM_001199281	chr22,chr22,chr22,chr22	-,+,+,+	GSTTP2,CABIN1,CABIN1,CABIN1	-5804,-1,-1,54
chr19:45350682-45350936	chr19	+	45350688	45350830	True	NM_001042724,NM_145288,NM_002856	chr19,chr19,chr19	+,-,+	PVRL2,ZNF296,PVRL2	-1346,228908,-1346
chr9:5457280-5459152	chr9	+	5457365	5459112	True	NM_014143,NM_018465	chr9,chr9	+,-	CD274,C9orf46	-6913,-19505
chr10:99162859-99163592	chr10	+	99163434	99163551	True	NM_015179,NM_001145114,NM_002629	chr10,chr10,chr10	-,-,+	RRP12,RRP12,PGAM1	-2307,-2307,22475
chr19:40022106-40022614	chr19	+	40022198	40022604	True	NM_152361,NM_153232,NM_182704	chr19,chr19,chr19	-,-,+	EID2B,EID2,SELV	948,8292,-16504
chr20:48343668-48345574	chr20	+	48344291	48345344	True	NM_015266,NM_004776	chr20,chr20	+,-	SLC9A8,B4GALT5	83905,-13870
chr7:148893554-148893784	chr7	+	148893585	148893783	True	NM_001001661,NM_003575	chr7,chr7	-,+	ZNF425,ZNF282	-70147,-1059
chr20:43284414-43284824	chr20	+	43284458	43284614	True	NM_003881,NM_000022	chr20,chr20	+,-	WISP2,ADA	59270,-4082
chr5:60935119-60935978	chr5	+	60935139	60935933	True	NM_001048249,NM_173667	chr5,chr5	-,+	C5orf43,FLJ37543	-476837,-1554
chr20:36654720-36656248	chr20	+	36654886	36655625	True	NM_021215,NM_014657	chr20,chr20	+,-	RPRD1B,TTI1	6322,6265
chr3:195870706-195870969	chr3	+	195870734	195870912	True	NR_034088,NM_001128148	chr3,chr3	+,-	LOC401109,TFRC	-1278,-61702
chr19:34976281-34976960	chr19	+	34976421	34976979	True	NR_027620,NM_001080436	chr19,chr19	-,+	LOC643719,WTIP	91667,-3592
chr6:149886467-149887033	chr6	+	149886624	149886833	True	NM_139126,NM_138785	chr6,chr6	-,+	PPIL4,C6orf72	-19453,694
chr1:8083632-8085613	chr1	+	8083841	8085590	True	NM_007262,NM_018948	chr1,chr1	+,-	PARK7,ERRFI1	-62184,853
chr1:204331004-204332291	chr1	+	204331114	204332142	True	NM_001204171,NR_027022,NM_014935	chr1,chr1,chr1	+,-,-	MDM4,LOC127841,PLEKHA6	153364,6755,-2070
chr4:139094156-139094508	chr4	+	139094305	139094431	True	NR_037866,NM_012118	chr4,chr4	-,+	LOC641365,CCRN4L	-42466,842511
chr19:8372801-8373192	chr19	+	8372859	8373233	True	NM_001031,NM_016579,NM_001165895	chr19,chr19,chr19	+,-,-	RPS28,CD320,CD320	13150,57,57
chr12:102224307-102224539	chr12	+	102224346	102224456	True	NM_018370,NM_024312	chr12,chr12	+,-	DRAM1,GNPTAB	46648,239
chr8:11041521-11042501	chr8	+	11041606	11042516	True	NM_173683,NM_015458	chr8,chr8	-,+	XKR6,MTMR9	16409,99483
chr11:118938752-118939316	chr11	+	118938820	118939118	True	NM_021729,NM_001130991	chr11,chr11	+,-	VPS11,HYOU1	-378,-10895
chr19:44860700-44861000	chr19	+	44860716	44861038	True	NM_001083335,NM_013380,NM_181756	chr19,chr19,chr19	-,-,+	ZFP112,ZFP112,ZNF233	24,24,-96691
chr9:36259816-36260127	chr9	+	36259970	36260060	True	NM_001190383,NM_007096,NM_001190384,NM_005476	chr9,chr9,chr9,chr9	-,+,-,-	GNE,CLTA,GNE,GNE	-1474,-69168,-1474,-1474
chr1:202895432-202895719	chr1	+	202895442	202895723	True	NR_002929,NM_021633	chr1,chr1	+,-	LOC148709,KLHL12	-64618,699
chr14:53259055-53259946	chr14	+	53259060	53259594	True	NM_198066,NM_145251	chr14,chr14	-,+	GNPNAT1,STYX	-674,-62228
chr10:81267696-81268168	chr10	+	81267739	81267987	True	NM_001099692,NM_001098668	chr10,chr10	+,-	EIF5AL1,SFTPA2	4369,52226
chr10:13548135-13548661	chr10	+	13548203	13548705	True	NM_003675,NM_152751,NM_001100912	chr10,chr10,chr10	+,-,-	PRPF18,BEND7,BEND7	80233,-3227,-3227
chr19:1276804-1277283	chr19	+	1276969	1277297	True	NM_001280,NR_027271,NM_017914,NR_023313,NR_023312,NM_001405	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+	CIRBP,C19orf23,C19orf24,CIRBP,CIRBP,EFNA2	-7753,-6710,-1500,-7753,-7753,8870
chr9:112968259-112969859	chr9	+	112968347	112969347	True	NM_001136562,NM_001012993	chr9,chr9	+,-	AKAP2,C9orf152	-80617,1116
chr5:175874757-175875007	chr5	+	175874829	175875045	True	NM_014613,NM_007097	chr5,chr5	+,-	FAF2,CLTB	310,-31289
chr11:2291147-2291425	chr11	+	2291254	2291418	True	NM_139022,NM_005170	chr11,chr11	+,-	TSPAN32,ASCL2	31824,814
chr7:99612098-99613164	chr7	+	99612388	99612974	True	NM_001185,NM_003439	chr7,chr7	-,+	AZGP1,ZKSCAN1	-38653,244
chr20:62149672-62150115	chr20	+	62149795	62150105	True	NM_024299,NM_005975	chr20,chr20	+,-	PPDPF,PTK6	2027,18652
chr4:120062830-120063700	chr4	+	120062843	120063731	True	NM_016599,NM_001001701	chr4,chr4	+,-	MYOZ2,C4orf3	-5969,158287
chr6:42930246-42930825	chr6	+	42930246	42930862	True	NM_018960,NM_000287	chr6,chr6	+,-	GNMT,PEX6	-1797,16169
chr14:91720081-91720293	chr14	+	91720147	91720273	True	NM_001177676,NR_003709,NM_003485	chr14,chr14,chr14	-,+,-	GPR68,SNORA11B,GPR68	-9295,-127428,1
chr4:54229608-54229845	chr4	+	54229607	54229717	True	NM_001134937,NM_152540	chr4,chr4	+,-	FIP1L1,SCFD2	14102,2581
chr7:124393986-124394519	chr7	+	124394063	124394555	True	NM_005302,NM_001174046	chr7,chr7	-,+	GPR37,SPAM1	11181,-828209
chr20:31673981-31675831	chr20	+	31674248	31675870	True	NM_182519,NM_080675	chr20,chr20	+,-	C20orf186,SUN5	-4982,-82009
chr5:122368084-122369560	chr5	+	122368261	122369589	True	NM_001136239,NM_000943	chr5,chr5	+,-	PRDM6,PPIC	55251,2886
chr4:87317218-87318759	chr4	+	87317510	87318748	True	NM_138982,NM_006264	chr4,chr4	-,+	MAPK10,PTPN13	-36135,196719
chr17:43696874-43697162	chr17_ctg5_hap1	-	1170973	1171134	False	NR_026680,NR_026901,NR_037772,NR_027295	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	-,+,-,-	MGC57346,LOC644172,CRHR1,MGC57346	-522,17304,-520,-791
chr17:43696874-43697162	chr17_ctg5_hap1	+	562821	562982	False	NM_001193465,NR_034172	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	KIAA1267,LOC644246	515,32455
chr17:43696874-43697162	chr17	+	43696911	43697189	True	NR_026680,NR_026901,NR_037772,NR_027295	chr17,chr17,chr17,chr17	+,-,+,+	MGC57346,LOC644172,CRHR1,MGC57346	522,-17163,520,791
chr17:43696874-43697162	chr17	-	44303255	44303533	False	NM_001193465,NR_034172	chr17,chr17	-,+	KIAA1267,LOC644246	-515,-32368
chr19:36631358-36631791	chr19	+	36631415	36631615	True	NM_001003962,NM_001864,NM_001749	chr19,chr19,chr19	+,-,+	CAPNS1,COX7A1,CAPNS1	-548,12206,-548
chr1:67515871-67517112	chr1	+	67515936	67517115	True	NM_144701,NM_015139	chr1,chr1	+,-	IL23R,SLC35D1	115053,3022
chr6:36215817-36217681	chr6	+	36215852	36217722	True	NM_001010903,NM_001145716,NM_173676	chr6,chr6,chr6	-,+,+	C6orf222,PNPLA1,PNPLA1	86991,-4923,-4958
chr8:145161372-145161887	chr8	+	145161509	145161577	True	NM_030974,NR_024207,NM_032272	chr8,chr8,chr8	-,+,+	SHARPIN,KIAA1875,MAF1	-2369,1051,-2257
chr10:75185961-75187315	chr10	+	75186002	75186794	True	NM_001024593,NM_173348	chr10,chr10	-,+	ZMYND17,FAM149B1	6575,-258176
chr20:43538397-43538615	chr20	+	43538464	43538540	True	NM_006809,NM_001124756	chr20,chr20	-,+	TOMM34,PABPC1L	50624,162
chr1:166945364-166946184	chr1	+	166945405	166946157	True	NM_199351,NM_032858	chr1,chr1	-,+	ILDR2,MAEL	-844,12361
chr5:54833799-54834305	chr5	+	54834077	54834257	True	NR_001575,NM_001166533,NM_003711,NM_176895	chr5,chr5,chr5,chr5	-,+,-,-	RNF138P1,DDX4,PPAP2A,PPAP2A	-3707,199587,-3204,-3204
chr7:140395509-140396420	chr7	+	140395568	140396376	True	NM_004546,NR_024454	chr7,chr7	+,-	NDUFB2,LOC100134713	104,551
chr20:44639356-44639626	chr20	+	44639442	44639600	True	NM_004994,NM_022095	chr20,chr20	+,-	MMP9,ZNF335	-1946,-38609
chr11:133401935-133402244	chr11	+	133401939	133402259	True	NR_027276,NM_001012393	chr11,chr11	+,-	LOC100128239,OPCML	499907,194
chr3:72935957-72937236	chr3	+	72936129	72937013	True	NM_001080393,NM_018130	chr3,chr3	+,-	GXYLT2,SHQ1	371,-38531
chr21:33447866-33448836	chr21	+	33447922	33448644	True	NR_024352,NR_038033	chr21,chr21	+,-	NCRNA00159,NCRNA00159	3984,10014
chr3:111805677-111805929	chr3	+	111805734	111805944	True	NM_001171747,NM_024616,NM_001190259	chr3,chr3,chr3	+,+,-	C3orf52,C3orf52,GCET2	-610,-610,46258
chr1:1387023-1387259	chr1	+	1387054	1387292	True	NR_026871,NM_001039211	chr1,chr1	-,+	LOC441869,ATAD3C	-30404,-2036
chr1:39397696-39399356	chr1	+	39397749	39399393	True	NM_001136275,NM_017821	chr1,chr1	+,-	AKIRIN1,RHBDL2	57522,8113
chrX:153525729-153527354	chrX	+	153525898	153527178	True	NM_001205201,NM_001145934,NM_001145933,NM_012253,NM_001586	chrX,chrX,chrX,chrX,chrX	-,+,+,+,-	TEX28,TKTL1,TKTL1,TKTL1,TEX28	-2334,6230,-1928,-1928,-2444
chr19:57997009-57997398	chr19	+	57997099	57997199	True	NM_024691,NM_001144068,NM_001098491,NM_001098493,NM_001098492,NM_001098495,NM_001098494,NM_001098496,NM_001024596	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+,+,+,-	ZNF419,ZNF772,ZNF419,ZNF419,ZNF419,ZNF419,ZNF419,ZNF419,ZNF772	1879,-8161,1879,1879,1879,1879,1879,1879,-8161
chr14:93260459-93260667	chr14	+	93260461	93260641	True	NM_005606,NM_005113	chr14,chr14	-,+	LGMN,GOLGA5	-45414,8
chr14:51002823-51004739	chr14	+	51003556	51003826	True	NM_006575,NM_001127713,NM_198794	chr14,chr14,chr14	-,+,-	MAP4K5,ATL1,MAP4K5	-4180,-3810,-4180
chr2:74711877-74712244	chr2	+	74711880	74711977	True	NM_032779,NR_027749,NM_022492	chr2,chr2,chr2	-,+,+	CCDC142,TTC31,TTC31	-1523,-1731,-1731
chr7:73098249-73098725	chr7	+	73098256	73098593	True	NR_037776,NM_017528,NM_001202560,NM_032317	chr7,chr7,chr7,chr7	+,+,+,-	WBSCR22,WBSCR22,WBSCR22,DNAJC30	-409,-409,-409,-475
chr3:48480896-48481441	chr3	+	48481230	48481380	True	NM_024661,NM_130384,NM_001130082,NM_015933,NM_032166	chr3,chr3,chr3,chr3,chr3	-,+,-,+,+	CCDC51,ATRIP,PLXNB1,CCDC72,ATRIP	199,6837,-9770,305,6837
chr20:31062926-31063254	chr20	+	31062993	31063288	True	NM_080616,NR_034152	chr20,chr20	-,+	C20orf112,LOC149950	8050,111992
chr17:65040347-65040737	chr17	+	65040393	65040691	True	NM_014877,NM_000727	chr17,chr17	-,+	HELZ,CACNG1	200678,-40
chr2:203975579-203976252	chr2	+	203975724	203976051	True	NM_018256,NM_001114132	chr2,chr2	-,+	WDR12,NBEAL1	-198775,-96179
chr1:72749079-72749733	chr1	+	72749142	72749664	True	NM_153742,NM_173808	chr1,chr1	+,-	CTH,NEGR1	-1872292,-865
chr3:183147344-183147734	chr3	+	183147496	183147780	True	NM_015078,NM_032047	chr3,chr3	-,+	MCF2L2,B3GNT5	-1641,-176516
chr1:157966218-157967925	chr1	+	157966368	157967236	True	NM_018240,NR_033946	chr1,chr1	+,-	KIRREL,LOC646268	-3356,143244
chr10:94447427-94448264	chr10	+	94447453	94448283	True	NM_002729,NM_004969	chr10,chr10	+,-	HHEX,IDE	1397,-113601
chr8:12051623-12052162	chr8	+	12051933	12052129	True	NM_001083537,NR_003494,NR_027425	chr8,chr8,chr8	-,-,+	FAM86B1,FAM86B1,FAM66D	-309,-309,-78693
chr8:12051623-12052162	chr8	+	12294206	12294272	False	NR_026789,NM_001137610	chr8,chr8	+,-	FAM66A,FAM86B2	-74729,-354
chr2:191176262-191176839	chr2	+	191176305	191176873	True	NM_001128928,NM_014362,NM_198047	chr2,chr2,chr2	+,-,-	INPP1,HIBCH,HIBCH	31322,7948,7948
chr19:3538829-3539156	chr19	+	3539006	3539148	True	NM_001135580,NM_001042680	chr19,chr19	+,-	C19orf71,C19orf28	6,18473
chr9:130678366-130678685	chr9	+	130678417	130678723	True	NM_175039,NM_001018078,NM_175040	chr9,chr9,chr9	-,+,-	ST6GALNAC4,FPGS,ST6GALNAC4	632,-112960,632
chr7:102107754-102108398	chr7	+	102107839	102108237	True	NM_152892,NM_017621	chr7,chr7	+,-	LRWD1,ALKBH4	-2500,-2518
chr8:146051244-146051492	chr8	+	146051279	146051515	True	NM_001081004,NM_003416	chr8,chr8	-,+	COMMD5,ZNF7	26986,1387
chr11:134145749-134146130	chr11	+	134145775	134146025	True	NM_001080407,NM_199298	chr11,chr11	+,-	GLB1L3,THYN1	249,-22515
chr18:61559821-61560455	chr18	+	61559821	61560067	True	NM_002575,NM_001143818,NM_006919	chr18,chr18,chr18	+,+,-	SERPINB2,SERPINB2,SERPINB3	-4933,-4933,-230624
chr12:31227070-31227781	chr12	+	31227126	31227495	True	NM_004399,NM_001135811,NM_030653,NM_152438	chr12,chr12,chr12,chr12	+,-,+,+	DDX11,FAM60A,DDX11,DDX11	-398,251677,-398,-398
chr20:441049-442054	chr20	+	441126	441804	True	NM_144628,NM_031229	chr20,chr20	-,+	TBC1D20,RBCK1	1433,-52474
chr14:100790991-100791550	chr14	+	100791102	100791550	True	NM_001039355,NM_207117	chr14,chr14	-,+	SLC25A29,SLC25A47	-18242,-1474
chr2:85804747-85805167	chr2	+	85804758	85805184	True	NM_003761,NM_001142269,NM_006634	chr2,chr2,chr2	+,-,+	VAMP8,GGCX,VAMP5	-195,-16101,6346
chr10:71892766-71893383	chr10	+	71892792	71893268	True	NM_032797,NM_001198696,NM_018649	chr10,chr10,chr10	-,-,+	AIFM2,AIFM2,H2AFY2	-102,-102,-80486
chr19:40898291-40898997	chr19	+	40898362	40898882	True	NM_012268,NM_144685	chr19,chr19	+,-	PLD3,HIPK4	-44081,-2268
chr12:45283104-45283305	chr12	+	45283109	45283305	True	NM_001025356,NM_001145107	chr12,chr12	+,-	ANO6,NELL2	326464,-12476
chr1:247512393-247512961	chr1	+	247512592	247512942	True	NM_032752,NM_001079821	chr1,chr1	-,+	ZNF496,NLRP3	-17547,66515
chr21:15641390-15642299	chr21	+	15641612	15642026	True	NR_003088,NR_003087,NM_198996	chr21,chr21,chr21	+,+,-	ABCC13,ABCC13,LIPI	4093,4093,-62358
chr21:39288013-39288387	chr21	+	39288018	39288372	True	NM_002240,NR_026838	chr21,chr21	-,+	KCNJ6,DSCR8	374,205172
chr2:71129132-71130937	chr2	+	71129214	71130762	True	NM_015717,NM_012476	chr2,chr2	-,+	CD207,VAX2	-66261,-1545
chr1:111428081-111429776	chr1	+	111428534	111429557	True	NM_000560,NM_001006945	chr1,chr1	+,-	CD53,C1orf103	-12871,77066
chrX:79827639-79827895	chrX	+	79827715	79827870	True	NM_152630,NM_153252	chrX,chrX	+,-	FAM46D,BRWD3	-151820,237414
chr15:68500539-68501111	chr15	+	68500577	68501093	True	NM_033429,NM_015322,NM_001031733	chr15,chr15,chr15	-,+,-	CALML4,FEM1B,CALML4	-2129,69047,-2129
chr12:4550548-4550925	chr12	+	4550548	4550916	True	NM_020996,NM_001130862	chr12,chr12	-,+	FGF6,RAD51AP1	3914,97033
chrX:72666644-72667131	chrX	+	72666793	72667109	True	NM_005193,NR_029423	chrX,chrX	+,-	CDX4,LOC139201	-20,115862
chr10:95257316-95257595	chr10	+	95257321	95257546	True	NM_001127182,NM_133337,NM_018131	chr10,chr10,chr10	+,-,+	CEP55,MYOF,CEP55	-1003,-15247,-983
chr6:53530688-53531699	chr6	+	53530940	53531624	True	NM_018214,NM_001003760	chr6,chr6	+,-	LRRC1,KLHL31	128153,-434
chr17:7121038-7122594	chr17	+	7121105	7122282	True	NM_001365,NR_029896,NM_001128827,NM_000018,NM_001033859	chr17,chr17,chr17,chr17,chr17	-,-,-,+,+	DLG4,MIR324,DLG4,ACADVL,ACADVL	1137,4466,-177,870,870
chr7:156331842-156332820	chr7	+	156332011	156332847	True	NR_026865,NR_024119	chr7,chr7	-,+	C7orf13,NCRNA00244	100551,337
chr17:76250625-76251365	chr17	+	76250730	76251301	True	NR_002219,NM_001204210	chr17,chr17	-,+	EPR1,TMEM235	-29947,-23390
chr17:18952716-18953279	chr17	+	18952726	18952800	True	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	77981,-2390
chr17:18952716-18953279	chr17	-	19028369	19028443	False	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	2338,-78033
chr6:26463523-26464187	chr6	+	26463620	26463980	True	NM_001197233,NM_001197234,NM_078476,NM_003543,NM_007049	chr6,chr6,chr6,chr6,chr6	+,+,+,-,+	BTN2A1,BTN2A1,BTN2A1,HIST1H4H,BTN2A1	-5493,-5518,-5518,-177893,-5518
chr3:37283917-37284562	chr3	+	37283921	37284607	True	NM_002078,NM_017724,NM_001172713	chr3,chr3,chr3	+,-,+	GOLGA4,LRRFIP2,GOLGA4	74,-66070,74
chr16:4663233-4663599	chr16	+	4663363	4663495	True	NM_001142289,NM_145253	chr16,chr16	+,-	MGRN1,FAM100A	11330,1482
chr6:35260697-35261539	chr6	+	35261085	35261472	True	NM_018679,NM_022047	chr6,chr6	-,+	TCP11,DEF6	-151898,4122
chr1:110231649-110232826	chr1	+	110231899	110232733	True	NM_000561,NM_000849,NM_146421	chr1,chr1,chr1	+,-,+	GSTM1,GSTM3,GSTM1	-1532,50979,-1532
chr16:49859617-49860045	chr16	+	49859648	49859814	True	NM_153261,NM_015069	chr16,chr16	+,-	TMEM188,ZNF423	199374,1158
chr1:205533178-205534221	chr1	+	205533182	205533914	True	NM_181644,NR_027086	chr1,chr1	+,-	MFSD4,LOC284578	4197,-7419
chr5:112260901-112261923	chr5	+	112260947	112261586	True	NM_005669,NM_152624	chr5,chr5	-,+	REEP5,DCP2	-2916,50846
chr4:183829348-183829554	chr4	+	183829400	183829518	True	NR_003612,NM_001921,NM_001012732	chr4,chr4,chr4	+,-,-	FAM92A3,DCTD,DCTD	129299,9164,9164
chr20:51590056-51591810	chr20	+	51590345	51591753	True	NM_006526,NM_173485	chr20,chr20	-,+	ZNF217,TSHZ2	607934,-1450
chr7:42973474-42974136	chr7	+	42973477	42974161	True	NM_031903,NM_002787	chr7,chr7	+,-	MRPL32,PSMA2	-1598,-1672
chr2:96809750-96810154	chr2	+	96809887	96809993	True	NM_004418,NM_001037228,NM_001002036	chr2,chr2,chr2	-,+,-	DUSP2,LOC285033,ASTL	1236,95983,-5712
chr19:19281465-19281945	chr19	+	19281484	19281942	True	NM_001145785,NM_003721	chr19,chr19	-,+	MEF2B,RFXANK	-386,21065
chr12:8281286-8282309	chr12	+	8281324	8282041	True	NM_016184,NM_194450,NR_036440,NM_194447,NM_194448	chr12,chr12,chr12,chr12,chr12	+,+,-,+,+	CLEC4A,CLEC4A,POU5F1P3,CLEC4A,CLEC4A	-5147,-5147,5466,-5147,-5147
chr1:159033205-159034414	chr1	+	159033249	159034105	True	NM_004833,NM_005531	chr1,chr1	-,+	AIM2,IFI16	12592,-53619
chr13:41330166-41331671	chr13	+	41330298	41331115	True	NM_005830,NM_014252	chr13,chr13	-,+	MRPS31,SLC25A15	14282,32431
chr11:44587590-44587832	chr11	+	44587619	44587831	True	NM_021926,NM_002231,NM_001024844	chr11,chr11,chr11	-,+,+	ALX4,CD82,CD82	-255903,-529,-529
chr17:12921667-12923151	chr17	+	12921801	12922852	True	NM_014859,NM_018127,NM_001165962,NM_173717	chr17,chr17,chr17,chr17	+,-,-,-	ARHGAP44,ELAC2,ELAC2,ELAC2	-229025,-420,-420,-420
chr11:66235690-66237564	chr11	+	66235695	66237242	True	NM_170739,NM_145065,NM_001098510	chr11,chr11,chr11	-,+,+	MRPL11,PELI3,PELI3	-29385,-1410,-1410
chr22:50780276-50780806	chr22	+	50780486	50780826	True	NM_001001794,NM_014678	chr22,chr22	-,+	FAM116B,PPP6R2	-14997,933
chr4:139937457-139937898	chr4	+	139937517	139937620	True	NM_006874,NM_012118	chr4,chr4	-,+	ELF2,CCRN4L	68080,-625
chr5:159626747-159627714	chr5	+	159626844	159627757	True	NM_001130864,NM_001040442	chr5,chr5	-,+	PWWP2A,FABP6	-80392,-847
chr1:217264289-217265568	chr1	+	217264522	217265534	True	NM_138796,NM_206595,NM_206594	chr1,chr1,chr1	+,-,-	SPATA17,ESRRG,ESRRG	539160,-1546,-1546
chr10:112679196-112679540	chr10	+	112679196	112679492	True	NM_007373,NM_001195305,NM_001195304,NM_001195307,NM_001195306,NR_024141	chr10,chr10,chr10,chr10,chr10,chr10	+,-,-,-,-,-	SHOC2,BBIP1,BBIP1,BBIP1,BBIP1,BBIP1	52,-72,-72,-72,-502,-72
chr5:156568690-156569479	chr5	+	156569006	156569504	True	NM_004270,NM_001100816,NM_005546	chr5,chr5,chr5	-,-,+	MED7,MED7,ITK	467,332,38402
chr17:27348798-27349479	chr17	+	27348831	27349360	True	NM_178860,NM_016518	chr17,chr17	-,+	SEZ6,PIPOX	-15750,20557
chr6:693504-693758	chr6	+	693573	693705	True	NM_018303,NR_036585	chr6,chr6	-,+	EXOC2,IRF4	-464,-301885
chr12:55377758-55377961	chr12	+	55377773	55377997	True	NM_001098815,NM_001136030,NM_021191	chr12,chr12,chr12	-,-,+	KIAA0748,KIAA0748,NEUROD4	-2151,511,35731
chr15:96876267-96876509	chr15	+	96876339	96876491	True	NR_031715,NM_001145156,NM_001145155,NM_001145157,NR_034095,NM_021005	chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,-,+	MIR1469,NR2F2,NR2F2,NR2F2,LOC400456,NR2F2	-2,-596,-7233,77,-1006010,-2279
chr1:111150658-111151080	chr1	+	111150694	111151042	True	NM_004974,NR_003599	chr1,chr1	-,+	KCNA2,CYMP	-1719,-127357
chr1:117908310-117909154	chr1	+	117908521	117909193	True	NM_006699,NM_024626	chr1,chr1	+,-	MAN1A2,VTCN1	891,-154972
chr4:148653936-148654309	chr4	+	148653937	148654189	True	NM_138364,NM_024605	chr4,chr4	-,+	PRMT10,ARHGAP10	-48657,-536
chr1:204132799-204134258	chr1	+	204132999	204134097	True	NM_005686,NM_000537	chr1,chr1	+,-	SOX13,REN	-90804,1420
chr7:107751589-107752895	chr7	+	107751641	107752761	True	NM_007356,NM_000108	chr7,chr7	-,+	LAMB4,DLD	18095,-220106
chr22:41684466-41685085	chr22	+	41684502	41684860	True	NM_017590,NM_002883	chr22,chr22	+,-	ZC3H7B,RANGAP1	12706,-2286
chr8:29594226-29595485	chr8	+	29594346	29595448	True	NR_026765,NR_024473	chr8,chr8	-,+	C8orf75,LOC286135	10227,183580
chr1:111686450-111688339	chr1	+	111686732	111688260	True	NM_178454,NM_006090,NM_001007794	chr1,chr1,chr1	-,+,+	DRAM2,CEPT1,CEPT1	-3894,-3950,-4534
chr21:46074614-46075980	chr21	+	46074692	46075966	True	NM_198697,NM_198698,NM_198692	chr21,chr21,chr21	+,-,+	KRTAP12-3,KRTAP12-4,KRTAP10-11	1882,-116,-8413
chr14:65068917-65069259	chr14	+	65069060	65069264	True	NM_006977,NM_172365	chr14,chr14	-,+	ZBTB25,C14orf50	-98506,-52491
chr19:13907671-13908764	chr19	+	13907741	13908345	True	NR_036515,NM_023072	chr19,chr19	-,+	LOC284454,ZSWIM4	38820,-1518
chr11:63245238-63246592	chr11	+	63245262	63246632	True	NM_001146728,NM_001142535	chr11,chr11	-,+	HRASLS5,LGALS12	12098,26891
chr2:219285467-219286697	chr2	+	219285656	219286675	True	NM_007127,NM_022152	chr2,chr2	+,-	VIL1,TMBIM1	-1870,-128376
chr8:86136761-86138142	chr8	+	86136984	86137980	True	NM_001099672,NM_001099673,NM_001099670,NM_001099671,NM_198584	chr8,chr8,chr8,chr8,chr8	-,-,-,-,+	C8orf59,C8orf59,C8orf59,C8orf59,CA13	-4341,-4341,-4341,-4341,19735
chr9:36390602-36391903	chr9	+	36390632	36391507	True	NM_022781,NM_194328,NM_194329,NM_014791,NM_194332,NM_194330	chr9,chr9,chr9,chr9,chr9,chr9	-,-,-,+,-,-	RNF38,RNF38,RNF38,MELK,RNF38,RNF38	8843,9467,8843,181397,9467,9742
chr4:7436747-7437302	chr4	+	7436816	7437324	True	NR_036238,NM_001085382	chr4,chr4	+,-	MIR4274,PSAPL1	24430,-116
chr9:96821017-96821922	chr9	+	96821379	96821952	True	NM_021570,NM_152422	chr9,chr9	-,+	BARX1,PTPDC1	-103771,24793
chr16:58289760-58290415	chr16	+	58289778	58290446	True	NM_014157,NM_001142302,NM_001080492	chr16,chr16,chr16	+,+,-	CCDC113,CCDC113,PRSS54	-5989,-5989,38555
chr20:47805107-47805457	chr20	+	47805115	47805471	True	NM_017454,NM_017895,NM_017452,NM_017453,NM_004602,NM_001037328	chr20,chr20,chr20,chr20,chr20,chr20	-,+,-,-,-,-	STAU1,DDX27,STAU1,STAU1,STAU1,STAU1	-211,30360,-211,-211,-211,-211
chr6:8066197-8068085	chr6	+	8066442	8067723	True	NM_201280,NR_037616,NM_001199323,NM_001199322,NR_027712	chr6,chr6,chr6,chr6,chr6	-,-,-,-,+	MUTED,MUTED-TXNDC5,MUTED,MUTED,PIP5K1P1	-1795,-1795,-1795,-1795,-80159
chr17:72245262-72246229	chr17	+	72245316	72245764	True	NR_026914,NM_052869	chr17,chr17	-,+	MGC16275,TTYH2	-35856,-862
chr10:126139047-126139342	chr10	+	126139047	126139349	True	NM_001146340,NM_001167880	chr10,chr10	-,+	NKX1-2,LHPP	-497,10991
chr18:61032386-61033234	chr18	+	61032533	61033279	True	NM_002035,NM_002639	chr18,chr18	-,+	KDSR,SERPINB5	1277,110864
chr1:6086841-6087353	chr1	+	6086908	6087270	True	NM_001199860,NM_172130,NM_015102,NM_003636	chr1,chr1,chr1,chr1	+,+,-,+	KCNAB2,KCNAB2,NPHP4,KCNAB2	7077,-886,-34375,-886
chr1:17575967-17577304	chr1	+	17576364	17577000	True	NM_016233,NM_007365	chr1,chr1	+,-	PADI3,PADI2	-822,-130416
chr8:6564161-6565526	chr8	+	6564221	6565505	True	NM_018361,NM_207411	chr8,chr8	+,-	AGPAT5,XKR5	372,127711
chrX:118603156-118604343	chrX	+	118603322	118604270	True	NM_001152,NR_028443	chrX,chrX	+,-	SLC25A5,LOC100303728	-1010,-239
chr17:1944896-1945158	chr17	+	1944986	1945172	True	NR_029674,NR_029625,NM_080822	chr17,chr17,chr17	-,-,+	MIR132,MIR212,OVCA2	8180,8552,104
chr4:20797972-20798622	chr4	+	20797982	20798659	True	NM_147181,NM_145048	chr4,chr4	-,+	KCNIP4,PACRGL	53682,-96000
chr2:86947123-86947334	chr2	+	86947123	86947303	True	NM_022780,NM_001198954	chr2,chr2	+,-	RMND5A,RNF103-VPS24	110,992
chr2:86947123-86947334	chr2	-	87303792	87303850	False	NR_026846,NM_001024457	chr2,chr2	-,+	LOC285074,RGPD1	-256,-159105
chr2:196532466-196533514	chr2	+	196532468	196533544	True	NM_020342,NM_018897	chr2,chr2	+,-	SLC39A10,DNAH7	-10674,400042
chr17:35769776-35770419	chr17	+	35769869	35770387	True	NM_001488,NM_001166105,NM_133439,NM_198839,NM_198834	chr17,chr17,chr17,chr17,chr17	+,+,+,-,-	TADA2A,TADA2A,TADA2A,ACACA,ACACA	-2612,-2947,-2612,-2967,-2967
chr6:13616190-13616535	chr6	+	13616344	13616562	True	NM_016167,NM_005493	chr6,chr6	+,-	NOL7,RANBP9	-840,95284
chr7:128692257-128693471	chr7	+	128692339	128692989	True	NM_001191028,NM_012470,NR_002187,NR_034053	chr7,chr7,chr7,chr7	-,-,+,-	TNPO3,TNPO3,TPI1P2,TNPO3	2300,2300,2287,2300
chr11:82907177-82908084	chr11	+	82907223	82908124	True	NM_182603,NM_021825	chr11,chr11	+,-	ANKRD42,CCDC90B	-1992,89306
chr15:54031580-54032340	chr15	+	54031583	54032382	True	NM_182758,NM_001080534	chr15,chr15	-,+	WDR72,UNC13C	19529,272718
chr6:14815735-14816501	chr6	+	14815741	14816527	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	429999,846812
chr19:19772326-19774078	chr19	+	19772352	19773762	True	NM_020410,NM_033204	chr19,chr19	-,+	ATP13A1,ZNF101	791,5900
chr11:61525920-61526163	chr11	+	61525992	61526158	True	NR_026882,NM_013279,NM_001127392	chr11,chr11,chr11	-,+,+	DKFZP434K028,C11orf9,C11orf9	-856,-3182,-5922
chr16:66578094-66578514	chr16	+	66578336	66578560	True	NM_001204099,NM_001204098,NM_016951,NM_001172645,NM_001172644,NM_001172643,NM_001202509,NM_001040138,NM_004614,NM_181641,NM_181640,NM_016326	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,-,-,-,+,+,-,+,+,+	CKLF-CMTM1,CKLF-CMTM1,CKLF,TK2,TK2,TK2,CKLF-CMTM1,CKLF,TK2,CKLF,CKLF,CKLF	7905,7905,7905,5805,5805,5684,7905,7905,5805,7905,7905,7905
chr11:90015773-90016010	chr11	+	90015788	90015852	True	NM_012124,NM_005467	chr11,chr11	-,+	CHORDC1,NAALAD2	-59256,-148021
chr4:139161440-139162626	chr4	+	139161810	139162560	True	NM_012118,NM_014331	chr4,chr4	+,-	CCRN4L,SLC7A11	774382,993
chr19:35979681-35980000	chr19	+	35979684	35980046	True	NM_005306,NM_207392	chr19,chr19	+,-	FFAR2,KRTDAP	-39118,1360
chr12:124247247-124247938	chr12	+	124247291	124247757	True	NM_207437,NM_001414	chr12,chr12	+,-	DNAH10,EIF2B1	-300,-128968
chr19:52840065-52840559	chr19	+	52840076	52840326	True	NM_001161427,NM_001161426,NM_001161425,NM_001102657,NM_173530	chr19,chr19,chr19,chr19,chr19	+,+,+,-,+	ZNF610,ZNF610,ZNF610,ZNF836,ZNF610	-629,-629,-629,-165180,8355
chr5:155795192-155796734	chr5	+	155795565	155796629	True	NM_001128209,NM_001146726	chr5,chr5	+,-	SGCD,TIMD4	-41849,593687
chr3:46503546-46504379	chr3	+	46503552	46504054	True	NM_002343,NM_001199149,NM_031440	chr3,chr3,chr3	-,-,+	LTF,LTF,RTP3	2594,1157,35430
chr2:163620364-163622307	chr2	+	163620638	163622022	True	NM_033272,NM_012198	chr2,chr2	-,+	KCNH7,GCA	73287,-420116
chr12:95618854-95619187	chr12	+	95618950	95619081	True	NM_017599,NM_018351	chr12,chr12	+,-	VEZT,FGD6	-7488,-7710
chr14:35209983-35210769	chr14	+	35210022	35210642	True	NR_002937,NR_028131	chr14,chr14	+,-	C14orf19,CFL2	198485,-25993
chr3:108475971-108476538	chr3	+	108476149	108476577	True	NM_016388,NM_032579	chr3,chr3	+,-	TRAT1,RETNLB	65053,-19
chr4:24950140-24951497	chr4	+	24950155	24951429	True	NM_003102,NM_173463	chr4,chr4	+,-	SOD3,CCDC149	-153121,30447
chr7:5601506-5601801	chr7	+	5601705	5601847	True	NM_001101,NM_003088	chr7,chr7	-,+	ACTB,FSCN1	-31473,30606
chr20:43275931-43276278	chr20	+	43276115	43276285	True	NM_003881,NM_000022	chr20,chr20	+,-	WISP2,ADA	67599,4141
chr12:9918247-9919466	chr12	+	9918251	9919193	True	NR_026671,NM_001781,NR_026672,NM_016523	chr12,chr12,chr12,chr12	-,-,-,+	CD69,CD69,CD69,KLRF1	-4754,-4754,-4754,60883
chr12:51721658-51721973	chr12	+	51721688	51721921	True	NM_001136269,NM_016293	chr12,chr12	+,-	DAZAP2,BIN2	-89231,-3750
chr10:99257682-99257957	chr10	+	99257801	99257933	True	NM_022362,NM_024954	chr10,chr10	-,+	MMS19,UBTD1	483,834
chr21:45878400-45879081	chr21	+	45878412	45879019	True	NM_198691,NM_030891	chr21,chr21	-,+	KRTAP10-1,LRRC3	81109,-3070
chr2:239147640-239147846	chr2	+	239147744	239147880	True	NR_026925,NM_001142853,NR_026926,NM_018645,NR_026923	chr2,chr2,chr2,chr2,chr2	-,-,-,-,+	LOC151174,HES6,LOC151174,HES6,LOC643387	-7426,851,-7426,851,-7468
chr4:69215579-69216487	chr4_ctg9_hap1	+	45519	46171	False	NM_014058,NM_133370,NM_001031732	chr4_ctg9_hap1,chr4_ctg9_hap1,chr4_ctg9_hap1	+,-,-	TMPRSS11E,YTHDC1,YTHDC1	96917,37,37
chr4:69215579-69216487	chr4	+	69215597	69216249	True	NM_014058,NM_133370,NM_001031732	chr4,chr4,chr4	+,-,-	TMPRSS11E,YTHDC1,YTHDC1	96917,37,37
chr7:127033278-127033949	chr7	+	127033322	127033694	True	NM_001662,NM_176814	chr7,chr7	+,-	ARF5,ZNF800	194711,-555
chr16:5085587-5086283	chr16	+	5085596	5086330	True	NM_019109,NM_016256	chr16,chr16	+,-	ALG1,NAGPA	35479,-1654
chr19:44079395-44079603	chr19	+	44079395	44079629	True	NM_001193621,NM_001193622,NM_006297	chr19,chr19,chr19	+,+,-	LOC390940,LOC390940,XRCC1	1322,5066,151
chr9:95289165-95290541	chr9	+	95289839	95290579	True	NR_036505,NM_001393,NM_001197295,NM_001197296	chr9,chr9,chr9,chr9	+,-,-,-	LOC100128361,ECM2,ECM2,ECM2	89752,7845,7845,7845
chr3:129146878-129147271	chr3	+	129146913	129147271	True	NM_018262,NM_207307	chr3,chr3	+,-	IFT122,C3orf25	11696,273
chr20:1373476-1373809	chr20	+	1373534	1373852	True	NR_037661,NM_000801,NM_014723,NM_054014,NM_001199786	chr20,chr20,chr20,chr20,chr20	-,-,+,-,-	FKBP1A-SDCBP2,FKBP1A,SNPH,FKBP1A,FKBP1A	14,14,-126625,14,14
chr11:65624009-65624307	chr11	+	65624013	65624323	True	NM_025128,NM_005507	chr11,chr11	+,-	MUS81,CFL1	3548,1531
chr15:89764850-89765059	chr15	+	89764855	89764929	True	NM_001113378,NM_000326	chr15,chr15	+,-	FANCI,RLBP1	22264,43
chr2:107123677-107123942	chr2	+	107123688	107123990	True	NM_001144013,NR_003506	chr2,chr2	-,+	RGPD3,PLGLA	-38887,-120970
chr8:7335366-7336650	chr8	+	7335781	7336679	True	NM_080389,NM_001040702,NM_001040703,NM_001040704,NM_152250,NM_152251	chr8,chr8,chr8,chr8,chr8,chr8	-,-,+,-,+,-	DEFB104A,DEFB104B,DEFB105B,DEFB106B,DEFB105A,DEFB106A	-3177,-3177,8563,7280,8563,7280
chr8:7335366-7336650	chr8	-	7689909	7690811	False	NM_080389,NM_001040702,NM_001040703,NM_001040704,NM_152250,NM_152251	chr8,chr8,chr8,chr8,chr8,chr8	+,+,-,+,-,+	DEFB104A,DEFB104B,DEFB105B,DEFB106B,DEFB105A,DEFB106A	3181,3181,-8549,-7266,-8549,-7266
chr9:44757375-44758068	chr9	+	44757451	44757953	True	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	232282,-1126721
chr6:116977333-116977845	chr6	+	116977535	116977894	True	NM_145062,NM_002269	chr6,chr6	-,+	ZUFSP,KPNA5	12133,24472
chr4:146102182-146103054	chr4	+	146102216	146102852	True	NM_002940,NM_017493,NM_001102653	chr4,chr4,chr4	+,-,-	ABCE1,OTUD4,OTUD4	-83111,-6320,-1384
chr12:7261214-7261689	chr12	+	7261279	7261501	True	NR_026947,NM_016546	chr12,chr12	+,-	LOC283314,C1RL	-426,418
chr4:117521391-117521633	chr4	+	117521586	117521687	True	NM_152402,NR_031737	chr4,chr4	-,+	TRAM1L1,MIR1973	485110,-300770
chr20:383620-385088	chr20	+	383752	384988	True	NM_144628,NM_031229,NM_006462	chr20,chr20,chr20	-,+,+	TBC1D20,RBCK1,RBCK1	58249,3720,3720
chr5:69321973-69322430	chr5	+	69322008	69322395	True	NM_001178087,NM_022968,NR_024054,NM_021967,NM_022978	chr5,chr5,chr5,chr5,chr5	+,+,-,+,+	SERF1B,SERF1A,LOC100170939,SERF1A,SERF1B	-989,-995,199286,-995,-989
chr5:69321973-69322430	chr5	+	70197426	70197813	False	NM_001178087,NM_022968,NM_004536,NM_021967,NM_022978	chr5,chr5,chr5,chr5,chr5	+,+,-,+,+	SERF1B,SERF1A,NAIP,SERF1A,SERF1B	-989,-995,123187,-995,-989
chr17:73006587-73007679	chr17	+	73006885	73007656	True	NM_001545,NM_001003785	chr17,chr17	+,-	ICT1,ATP5H	1123,35469
chr18:61232342-61233925	chr18	+	61232482	61233748	True	NM_080474,NM_002974	chr18,chr18	+,-	SERPINB12,SERPINB4	-9140,77805
chr5:56508801-56509175	chr5	+	56508800	56509228	True	NM_152622,NM_001127236	chr5,chr5	-,+	MIER3,GPBP1	-260846,672
chrX:70943861-70944181	chrX	+	70943929	70944229	True	NR_034005,NM_001145140,NM_001145139,NR_001568	chrX,chrX,chrX,chrX	+,-,-,-	FLJ46446,CXorf49,CXorf49B,BCYRN1	-26934,-5794,-5794,4783
chrX:70943861-70944181	chrX	-	70976997	70977297	False	NR_001568,NM_001145140,NM_001145139	chrX,chrX,chrX	-,+,+	BCYRN1,CXorf49,CXorf49B	-28035,5842,5842
chrX:152612615-152613075	chrX	+	152612672	152613090	True	NM_001080485,NM_080701	chrX,chrX	+,-	ZNF275,TREX2	-13110,98905
chr2:24231587-24232178	chr2	+	24231743	24232227	True	NM_001080473,NM_001142319	chr2,chr2	+,-	MFSD2B,C2orf44	725,38119
chr12:123198776-123199613	chr12	+	123199257	123199653	True	NM_006018,NM_003677	chr12,chr12	-,+	GPR109B,DENR	1836,37717
chr12:123198776-123199613	chr12	+	123185794	123186090	False	NM_003677,NM_177551	chr12,chr12	+,-	DENR,GPR109A	51280,1864
chr8:12668694-12670512	chr8	+	12668868	12670528	True	NR_015383,NR_037495	chr8,chr8	-,+	LOC340357,MIR3926-2	42,-84173
chrX:103401084-103401418	chrX	+	103401112	103401442	True	NM_001012755,NM_207318	chrX,chrX	-,+	MCART6,FAM199X	316,9858
chrX:119764954-119765238	chrX	+	119765085	119765152	True	NM_152692,NM_001137554,NM_001011551	chrX,chrX,chrX	-,+,-	C1GALT1C1,MCTS1,C1GALT1C1	-1080,-26594,-1080
chr12:21546463-21547978	chr12	+	21546578	21547932	True	NM_134431,NM_000415	chr12,chr12	-,+	SLCO1A2,IAPP	494,-20833
chr4:15940073-15941844	chr4	+	15940262	15941700	True	NM_005130,NM_001775	chr4,chr4	-,+	FGFBP1,CD38	-291,-160383
chr20:61866405-61866611	chr20	+	61866580	61866660	True	NM_022161,NM_139317,NR_036163,NM_017798	chr20,chr20,chr20,chr20	+,+,+,-	BIRC7,BIRC7,MIR3196,YTHDF1	615,615,3470,-19042
chr13:28366819-28367038	chr13	+	28366835	28367031	True	NM_153371,NM_145657	chr13,chr13	-,+	LNX2,GSX1	-172115,-106
chr9:96339948-96340195	chr9	+	96340116	96340196	True	NM_198841,NM_005392	chr9,chr9	-,+	FAM120AOS,PHF2	-124242,-1258
chr4:83501752-83502772	chr4	+	83501783	83502532	True	NM_001080506,NM_021204	chr4,chr4	-,+	TMEM150C,ENOPH1	-18657,-150108
chr17:33896154-33896997	chr17	+	33896178	33896994	True	NR_003037,NM_000286	chr17,chr17	+,-	SNORD7,PEX12	3681,8721
chr17:27621060-27621342	chr17	+	27621156	27621240	True	NM_005208,NM_020772	chr17,chr17	+,-	CRYBA1,NUFIP2	-47332,2
chr16:71603789-71604016	chr16	+	71603816	71604062	True	NM_000353,NM_001166395	chr16,chr16	-,+	TAT,CHST4	6986,-43714
chr8:70983565-70983835	chr8	+	70983649	70983867	True	NM_024504,NM_001128206	chr8,chr8	-,+	PRDM14,SULF1	-87,-578672
chr21:45960941-45961345	chr21	+	45960953	45961394	True	NR_026548,NM_198691	chr21,chr21	+,-	C21orf90,KRTAP10-1	-23906,-875
chr16:19730138-19731087	chr16	+	19730235	19730609	True	NM_153208,NM_001012991	chr16,chr16	+,-	IQCK,C16orf88	-2508,-743
chr1:151592069-151593355	chr1	+	151592141	151593141	True	NM_030918,NM_001172648	chr1,chr1	+,-	SNX27,CELF3	-7537,95701
chr1:152852776-152853880	chr1	+	152852855	152853781	True	NM_178351,NM_030663	chr1,chr1	-,+	LCE1C,SMCP	-73748,-2108
chr9:136390499-136390942	chr9	+	136390523	136390991	True	NM_014694,NM_001080483,NM_001145320	chr9,chr9,chr9	+,-,+	ADAMTSL2,TMEM8C,ADAMTSL2	8983,-455,6294
chr4:20323522-20324696	chr4	+	20323615	20324737	True	NR_037876,NM_147181,NM_004787	chr4,chr4,chr4	+,-,+	LOC100505893,KCNIP4,SLIT2	69074,527610,-68431
chr4:104066094-104067803	chr4	+	104066357	104067840	True	NM_020139,NM_001008388	chr4,chr4	-,+	BDH2,CISD2	-45333,-276281
chr3:129262024-129262391	chr3	+	129262044	129262374	True	NM_153833,NM_015103	chr3,chr3	+,-	H1FOO,PLXND1	-38,63258
chr4:103221084-103221827	chr4	+	103221097	103221870	True	NM_001135148,NM_001165412	chr4,chr4	-,+	SLC39A8,NFKB1	23658,200615
chrX:149106622-149106875	chrX	+	149106633	149106887	True	NR_027456,NM_001013845	chrX,chrX	+,-	LOC100272228,CXorf40B	2,3
chr6:89673511-89673739	chr6	+	89673515	89673785	True	NM_006813,NM_003800	chr6,chr6	+,-	PNRC1,RNGTT	116643,-167
chr1:15782573-15783822	chr1	+	15782994	15783784	True	NM_033440,NM_001229	chr1,chr1	+,-	CELA2A,CASP9	18,67206
chr20:62290535-62290930	chr20	+	62290566	62290776	True	NR_037882,NM_016434,NM_015894,NM_032957	chr20,chr20,chr20,chr20	+,+,-,+	RTEL1-TNFRSF6B,RTEL1,STMN3,RTEL1	-1454,-1454,-5786,-1454
chr20:57416213-57416479	chr20	+	57416256	57416471	True	NM_016592,NR_002785	chr20,chr20	+,-	GNAS,GNAS-AS1	-1512,9538
chr5:74639000-74640518	chr5	+	74639456	74640164	True	NM_000859,NM_001130996,NM_001164443	chr5,chr5,chr5	+,+,-	HMGCR,HMGCR,ANKRD31	-6519,-6519,-106753
chr14:35100242-35100634	chr14	+	35100399	35100480	True	NR_002937,NM_021249,NM_152233	chr14,chr14,chr14	+,-,-	C14orf19,SNX6,SNX6	308647,-1084,-1033
chrX:52839774-52840330	chrX	+	52839825	52840317	True	NM_130775,NM_001009616	chrX,chrX	+,-	XAGE5,SPANXN5	910,-13437
chr22:35649771-35650464	chr22	+	35649954	35650432	True	NM_001003681,NR_027780,NM_005368	chr22,chr22,chr22	+,+,-	HMGXB4,HMGXB4,MB	3012,3012,363002
chr11:119015122-119015652	chr11	+	119015121	119015685	True	NM_022169,NM_001142505,NM_001382	chr11,chr11,chr11	+,+,-	ABCG4,ABCG4,DPAGT1	4064,4613,-42336
chr7:143955103-143956119	chr7	+	143955110	143956074	True	NR_002158,NM_001005328,NR_002157	chr7,chr7,chr7	-,-,-	OR2A20P,OR2A7,OR2A9P	-6414,699,-6562
chr7:143955103-143956119	chr6	+	132020930	132021894	False	NM_030908,NM_005021	chr6,chr6	-,+	OR2A4,ENPP3	699,-62546
chr1:23346897-23348011	chr1	+	23347091	23347853	True	NM_001142546,NM_015013,NM_001009999	chr1,chr1,chr1	-,+,+	LUZP1,KDM1A,KDM1A	147556,-1210,-1210
chrX:151902648-151903216	chrX	+	151902903	151903217	True	NM_001166387,NM_001166386,NM_001102576,NM_005367,NM_153478	chrX,chrX,chrX,chrX,chrX	-,-,+,-,+	MAGEA12,MAGEA12,CSAG1,MAGEA12,CSAG1	17,22,10,17,10
chr10:121300855-121301183	chr10	+	121300927	121301171	True	NM_001005339,NM_004281,NM_002925	chr10,chr10,chr10	-,+,-	RGS10,BAG3,RGS10	1101,109710,-4882
chr16:189856-190899	chr16	+	190140	190892	True	NM_001039476,NM_001077350,NM_005332	chr16,chr16,chr16	-,-,+	NPRL3,NPRL3,HBZ	-1530,-1468,11961
chrX:102332701-102333519	chrX	+	102332740	102333054	True	NM_018476,NM_001127688	chrX,chrX	-,+	BEX1,BEX4	-13572,136965
chr16:58768758-58769214	chr16	+	58768893	58769212	True	NM_002080,NM_024860	chr16,chr16	-,+	GOT2,SETD6	-647,-219561
chr1:7994623-7995114	chr1	+	7994840	7995082	True	NM_001561,NM_001123377	chr1,chr1	-,+	TNFRSF9,PARK7	8193,26631
chr8:21898774-21899101	chr8	+	21898822	21899142	True	NM_024815,NM_003867	chr8,chr8	-,+	NUDT18,FGF17	67840,1285
chr15:25201828-25203012	chr15	+	25202010	25203040	True	NM_003097,NM_022804,NM_130838,NM_005678	chr15,chr15,chr15,chr15	+,+,-,+	SNRPN,SNURF,UBE3A,SNURF	-1926,-1991,447663,-1926
chr14:55518933-55520477	chr14	+	55519031	55520310	True	NM_007086,NM_144578	chr14,chr14	-,+	WDHD1,MAPK1IP1L	-25212,-720
chr11:22850965-22851210	chr11	+	22850975	22851083	True	NM_005256,NM_148893	chr11,chr11	+,-	GAS2,SVIP	-154707,349
chr10:134211437-134212234	chr10	+	134211569	134211853	True	NM_001098637,NM_138499,NM_173575	chr10,chr10,chr10	+,+,-	PWWP2B,PWWP2B,STK32C	-918,-918,-90092
chr7:138794564-138795419	chr7	+	138794683	138795195	True	NM_024625,NM_001144920,NM_020119	chr7,chr7,chr7	-,+,-	ZC3HAV1,TTC26,ZC3HAV1	-218,23294,-218
chr16:85648647-85648864	chr16	+	85648667	85648887	True	NM_001134473,NM_014615,NM_016095	chr16,chr16,chr16	+,+,-	KIAA0182,KIAA0182,GINS2	-3689,-1794,73751
chr5:32174540-32174819	chr5	+	32174581	32174820	True	NM_022130,NM_178140	chr5,chr5	-,+	GOLPH3,PDZD2	-156,-375601
chr2:96781645-96781954	chr2	+	96781656	96781978	True	NR_003698,NM_000682	chr2,chr2	+,-	LOC729234,ADRA2B	-105408,-40
chr6:28111900-28112555	chr6	+	28112004	28112455	True	NR_002936,NM_006298	chr6,chr6	-,+	LOC222699,ZNF192	74315,-2339
chr19:9894566-9894881	chr19	+	9894815	9894893	True	NM_001048241,NM_001077624	chr19,chr19	+,-	UBL5,ZNF846	43674,-15405
chr6:3119168-3120427	chr6	+	3119387	3120275	True	NR_026648,NR_026649,NR_026650,NM_001069,NM_004332	chr6,chr6,chr6,chr6,chr6	+,+,+,-,+	BPHL,BPHL,BPHL,TUBB2A,BPHL	-512,-512,-512,37568,-512
chr9:69182086-69183218	chr9	+	69182487	69183221	True	NR_015361,NM_001098805	chr9,chr9	-,+	LOC440896,ANKRD20A4	-1446,198759
chr9:69182086-69183218	chr9	-	70936264	70936998	False	NR_015423,NM_199135	chr9,chr9	-,+	LOC572558,FOXD4L3	35809,-18532
chr7:141245765-141246894	chr7	+	141245903	141246940	True	NM_018238,NM_001080392	chr7,chr7	+,-	AGK,KIAA1147	4137,155064
chr3:130620708-130621878	chr3	+	130620791	130621791	True	NM_001199185,NM_001199184,NM_001199183,NM_001199179,NM_001001485,NM_001001486,NM_001001487,NM_014065,NM_014382	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,+,+,+,-,+	ATP2C1,ATP2C1,ATP2C1,ATP2C1,ATP2C1,ATP2C1,ATP2C1,ASTE1,ATP2C1	-7550,-7937,-7937,-8007,-7983,-7408,-7408,123913,-7550
chr19:48280997-48281657	chr19	+	48281420	48281694	True	NM_198479,NM_003009	chr19,chr19	-,+	TPRX1,SEPW1	25217,147
chr1:65431338-65431597	chr1	+	65431382	65431537	True	NM_203464,NM_002227	chr1,chr1	+,-	AK4,JAK1	181694,700
chr3:53160357-53162236	chr3	+	53160392	53161988	True	NM_006254,NM_052859	chr3,chr3	+,-	PRKCD,RFT1	33234,2543
chr8:22435867-22436313	chr8	+	22435891	22436216	True	NR_027715,NM_198042,NM_021630,NM_176871	chr8,chr8,chr8,chr8	-,+,+,+	FLJ14107,PDLIM2,PDLIM2,PDLIM2	63556,1770,37,1770
chrX:152224153-152224358	chrX	+	152224194	152224406	True	NM_032882,NM_013364	chrX,chrX	-,+	PNMA6A,PNMA3	21602,359
chr20:55175420-55175748	chr20	+	55175475	55175759	True	NM_080615,NM_003222	chr20,chr20	-,+	GCNT7,TFAP2C	-74494,28598
chr8:30057030-30057306	chr8	+	30057098	30057204	True	NM_006571,NM_001100916	chr8,chr8	+,-	DCTN6,MBOAT4	-43336,-54898
chr6:26043293-26043724	chr6	+	26043330	26043554	True	NM_003513,NM_021062,NM_003531	chr6,chr6,chr6	-,-,+	HIST1H2AB,HIST1H2BB,HIST1H3C	-9534,381,2084
chr17:72623418-72624261	chr17	+	72623454	72623876	True	NM_152460,NM_181449	chr17,chr17	+,-	C17orf77,CD300E	-42448,-3557
chr13:41362403-41363187	chr13	+	41362631	41363239	True	NM_005830,NM_014252	chr13,chr13	-,+	MRPS31,SLC25A15	-17284,307
chr21:47578314-47578605	chr21	+	47578334	47578604	True	NM_001849,NM_006657,NM_206965	chr21,chr21,chr21	+,-,-	COL6A2,FTCD,FTCD	-60352,-2853,-2853
chr9:107266905-107267378	chr9	+	107266930	107267280	True	NM_001004485,NM_001001919	chr9,chr9	+,-	OR13F1,OR13C4	-437,22260
chr3:53880270-53880552	chr3	+	53880286	53880600	True	NM_018397,NM_018725	chr3,chr3	-,+	CHDH,IL17RB	38,-24
chr16:90016107-90016331	chr16	+	90016191	90016271	True	NM_207514,NM_017702,NM_145039	chr16,chr16,chr16	+,+,-	DEF8,DEF8,CENPBD1	-1059,-1091,23019
chr20:62249502-62250062	chr20	+	62249544	62249960	True	NM_016434,NM_012384	chr20,chr20	+,-	RTEL1,GMEB2	39202,8471
chr3:195889077-195889729	chr3	+	195889162	195889768	True	NR_034088,NM_001039617	chr3,chr3	+,-	LOC401109,ZDHHC19	-19706,48582
chr15:72948588-72948946	chr15	+	72948759	72948965	True	NR_002780,NM_018652	chr15,chr15	-,+	HIGD2B,GOLGA6B	29575,-1774
chr15:72948588-72948946	chr15	-	78217404	78217490	False	NM_001101404,NR_027024	chr15,chr15	+,-	SH2D7,LOC645752	167436,1750
chr15:72948588-72948946	chr15	-	74373021	74373169	False	NM_001130136,NM_001038640	chr15,chr15	+,-	ISLR2,GOLGA6A	48545,1774
chr15:72948588-72948946	chr15	+	75576897	75577103	False	NR_030360,NM_001145224	chr15,chr15	-,+	MIR631,GOLGA6D	68973,-1768
chr15:72948588-72948946	chr15	+	75552620	75553028	False	NR_030360,NM_001164404	chr15,chr15	-,+	MIR631,GOLGA6C	93250,-1774
chr8:81399298-81399516	chr8	+	81399382	81399548	True	NM_005079,NM_023929,NM_001105539	chr8,chr8,chr8	-,+,+	TPD52,ZBTB10,ZBTB10	-315546,-985,-985
chr22:19513353-19514614	chr22	+	19513376	19514472	True	NM_001130861,NM_003277,NM_003504	chr22,chr22,chr22	-,-,+	CLDN5,CLDN5,CDC45	-516,-516,-46011
chr1:33168831-33169280	chr1	+	33168907	33169257	True	NM_030786,NM_001161708,NM_020888	chr1,chr1,chr1	-,-,+	SYNC,SYNC,KIAA1522	-546,-546,38254
chr17:37792946-37793264	chr17	+	37792951	37793290	True	NM_006160,NM_006804,NM_001165937,NM_181505,NM_001165938,NM_032192	chr17,chr17,chr17,chr17,chr17,chr17	-,+,+,+,+,+	NEUROD2,STARD3,STARD3,PPP1R1B,STARD3,PPP1R1B	-28776,42,42,-8249,42,-9823
chrX:47482629-47482976	chrX	+	47482686	47482925	True	NM_001145252,NM_002621,NM_006950,NM_133499,NR_028119	chrX,chrX,chrX,chrX,chrX	-,-,-,-,+	CFP,CFP,SYN1,SYN1,LOC100133957	6495,6830,-3430,-3430,35306
chr9:80911471-80911723	chr9	+	80911547	80911697	True	NM_002072,NM_021154,NM_058179	chr9,chr9,chr9	-,+,+	GNAQ,PSAT1,PSAT1	-265328,361,361
chr7:24797833-24798243	chr7	+	24797919	24798211	True	NM_004403,NM_016447,NM_001127453,NM_001127454	chr7,chr7,chr7,chr7	-,+,-,-	DFNA5,MPP6,DFNA5,DFNA5	-280,-184885,-836,-280
chr21:31001968-31003210	chr21	+	31002116	31002882	True	NM_175611,NR_033368	chr21,chr21	-,+	GRIK1,NCRNA00258	309450,-33814
chr15:41956336-41957859	chr15	+	41956413	41957495	True	NM_001080541,NM_015540,NM_001164273	chr15,chr15,chr15	+,-,+	MGA,RPAP1,MGA	-3867,-119949,-3867
chr1:110283340-110284961	chr1	+	110283466	110284938	True	NM_000851,NR_024537,NM_000849	chr1,chr1,chr1	+,-,-	GSTM5,GSTM3,GSTM3	-28653,10,10
chr17:16748750-16749002	chr17	+	16748763	16749043	True	NR_026810,NR_029392	chr17,chr17	+,-	FAM106C,KRT16P2	-56757,-12616
chr17:16748750-16749002	chr17	+	20420656	20420706	False	NM_001190790,NR_029393	chr17,chr17	+,-	CDRT15L2,KRT16P3	62330,-12845
chr17:16748750-16749002	chr17	-	18330326	18330606	False	NM_148918,NR_001443	chr17,chr17	-,+	SHMT1,LOC339240	-63470,-4882
chr1:161060975-161061182	chr1	+	161060992	161061142	True	NR_033386,NR_033385,NM_030916,NM_001007255,NM_152366	chr1,chr1,chr1,chr1,chr1	+,+,-,+,+	KLHDC9,KLHDC9,PVRL4,KLHDC9,KLHDC9	7008,7008,-1607,7038,7038
chr1:156829290-156829742	chr1	+	156829370	156829700	True	NM_001012331,NM_002529,NM_014215	chr1,chr1,chr1	+,+,-	NTRK1,NTRK1,INSRR	970,970,-658
chr5:76246417-76247969	chr5	+	76246656	76248011	True	NR_003014,NM_001882	chr5,chr5	-,+	SNORA47,CRHBP	128441,668
chr6:26157635-26158554	chr6	+	26157641	26158421	True	NM_138720,NM_003539,NM_005321,NM_021063	chr6,chr6,chr6,chr6	+,-,+,+	HIST1H2BD,HIST1H4D,HIST1H1E,HIST1H2BD	-9,30933,-1133,-9
chr3:47946077-47947755	chr3	+	47946490	47947702	True	NR_031595,NM_003074	chr3,chr3	+,-	MIR1226,SMARCC1	-55496,-123085
chr14:102420693-102421786	chr14	+	102420786	102421827	True	NM_001376,NM_005348	chr14,chr14	+,-	DYNC1H1,HSP90AA1	9037,131735
chr20:57427913-57428197	chr20	+	57427933	57428231	True	NM_001077490,NM_080425,NR_002785	chr20,chr20,chr20	+,+,-	GNAS,GNAS,GNAS-AS1	44,44,-1975
chr13:107213886-107215790	chr13	+	107214043	107215790	True	NM_018011,NR_034119	chr13,chr13	-,+	ARGLU1,LOC728192	4774,-185183
chr16:88639784-88640085	chr16	+	88639812	88640018	True	NM_000101,NM_144604	chr16,chr16	-,+	CYBA,ZC3H18	77493,-3074
chr11:63150742-63151443	chr11	+	63150742	63151247	True	NM_001146728,NM_080866	chr11,chr11	-,+	HRASLS5,SLC22A9	107490,-13541
chr10:48442681-48443106	chr10	+	48442815	48443128	True	NM_004962,NM_153034	chr10,chr10	-,+	GDF10,ZNF488	-3677,-87783
chr16:2002939-2003514	chr16	+	2002995	2003567	True	NM_016332,NR_002326,NR_002327,NM_004548,NM_005061	chr16,chr16,chr16,chr16,chr16	-,-,-,+,-	SEPX1,SNORA64,SNORA10,NDUFB10,RPL3L	-9701,9598,8958,5949,1170
chrX:63426073-63426304	chrX	+	63426077	63426337	True	NM_152424,NM_001010888	chrX,chrX	-,+	FAM123B,ZC3H12B	-453,1282277
chr7:72936642-72936900	chr7	+	72936646	72936852	True	NM_003508,NM_032408	chr7,chr7	+,-	FZD9,BAZ1B	-88588,-31
chr19:42789063-42789769	chr19	+	42789128	42789804	True	NM_015125,NM_002573	chr19,chr19	+,-	CIC,PAFAH1B3	-362,17042
chr17:36832502-36833475	chr17	+	36832506	36833442	True	NM_005937,NM_001130677	chr17,chr17	+,-	MLLT6,C17orf96	28430,-1319
chr12:56550414-56551034	chr12	+	56550845	56550910	True	NM_021019,NM_002475,NM_079423,NM_001130420,NM_001199629	chr12,chr12,chr12,chr12,chr12	+,+,+,-,+	MYL6,MYL6B,MYL6,SMARCC2,MYL6B	1134,-4694,1134,32496,-4694
chr6:42952693-42953674	chr6	+	42953078	42953457	True	NM_006245,NM_000287,NM_180976,NM_180977	chr6,chr6,chr6,chr6	+,-,+,+	PPP2R5D,PEX6,PPP2R5D,PPP2R5D	-799,-6097,-799,-799
chrX:91138726-91139044	chrY	+	4973307	4973374	False	NM_032973,NR_001540	chrY,chrY	+,-	PCDH11Y,TTTY23	-49232,1138332
chrX:91138726-91139044	chrX	+	91138828	91138895	True	NM_001168363,NM_004538	chrX,chrX	+,-	PCDH11X,NAP1L3	-48424,1789842
chr15:40064882-40066358	chr15	+	40065172	40066168	True	NM_001013703,NM_152597	chr15,chr15	+,-	EIF2AK4,FSIP1	160178,8937
chr5:102897904-102898476	chr5	+	102897974	102898476	True	NM_033211,NM_031438	chr5,chr5	+,-	C5orf30,NUDT12	-303584,64
chr2:95939813-95940435	chr2	+	95939886	95940248	True	NM_001165978,NM_144707,NM_032788,NM_001165977	chr2,chr2,chr2,chr2	+,+,-,+	PROM2,PROM2,ZNF514,PROM2	-48,-48,-114623,-48
chr6:34523465-34523759	chr6	+	34523536	34523740	True	NM_001199583,NM_012391	chr6,chr6	+,-	PACSIN1,SPDEF	-40938,401
chr17:65989085-65989301	chr17	+	65989135	65989349	True	NM_002266,NM_181656,NM_181655	chr17,chr17,chr17	+,-,-	KPNA2,C17orf58,C17orf58	42498,466,466
chr7:33944078-33944348	chr7	+	33944128	33944228	True	NM_133468,NM_203288	chr7,chr7	+,-	BMPER,RP9	883,-795126
chr6:170189830-170190165	chr6	+	170189851	170190111	True	NR_026781,NR_026780	chr6,chr6	-,+	NCRNA00242,C6orf208	8860,57
chr1:24147297-24147701	chr1	+	24147336	24147534	True	NM_000191,NM_001166059,NM_007260	chr1,chr1,chr1	-,-,+	HMGCL,HMGCL,LYPLA2	4467,4467,-29741
chr5:132011371-132011704	chr5	+	132011643	132011719	True	NM_007054,NM_172348,NM_000589	chr5,chr5,chr5	-,+,+	KIF3A,IL4,IL4	61596,-2321,-2321
chr1:160051462-160053397	chr1	+	160051677	160053064	True	NM_002241,NM_004983	chr1,chr1	-,+	KCNJ10,KCNJ9	-11626,-368
chr7:150720513-150721137	chr7	+	150720540	150721086	True	NM_173681,NM_007188	chr7,chr7	-,+	ATG9B,ABCB8	550,4423
chr16:30958597-30959026	chr16	+	30958627	30958997	True	NM_014712,NM_152288,NR_024348	chr16,chr16,chr16	+,+,-	SETD1A,ORAI3,FBXL19-AS1	9617,1407,-24037
chr2:208571224-208571826	chr2	+	208571666	208571808	True	NM_001142300,NM_152523,NM_003468	chr2,chr2,chr2	+,+,-	CCNYL1,CCNYL1,FZD5	4455,4455,62385
chr15:40524413-40524905	chr15	+	40524483	40524851	True	NM_020168,NM_001039905	chr15,chr15	+,-	PAK6,C15orf56	7183,20309
chrX:107316488-107318231	chrX	+	107316563	107317968	True	NM_052936,NM_002814	chrX,chrX	+,-	ATG4A,PSMD10	16930,16963
chr4:5051934-5052180	chr4	+	5051963	5052141	True	NM_018659,NM_018401	chr4,chr4	-,+	CYTL1,STK32B	-30766,1385
chr8:101165154-101167008	chr8	+	101165497	101166794	True	NM_172218,NM_001029860,NM_003114,NM_005034,NR_036491	chr8,chr8,chr8,chr8,chr8	+,-,+,+,-	SPAG1,FBXO43,SPAG1,POLR2K,FBXO43	3468,-7398,3768,-2720,-7398
chr4:89934274-89935084	chr4	+	89934289	89935107	True	NM_014883,NM_145715	chr4,chr4	-,+	FAM13A,TIGD2	43266,98860
chr11:124090360-124091282	chr11	+	124090361	124091285	True	NM_001002917,NM_001007249	chr11,chr11	-,+	OR8D1,OR8G2	89427,4112
chr3:32232635-32233431	chr3	+	32232883	32233069	True	NM_017784,NM_178868	chr3,chr3	-,+	OSBPL10,CMTM8	-209541,47101
chr16:2769664-2769882	chr16	+	2769706	2769882	True	NM_016333,NM_031948	chr16,chr16	+,-	SRRM2,PRSS27	32447,720
chr1:27480873-27481080	chr1	+	27480881	27481083	True	NM_015023,NM_003047	chr1,chr1	+,-	WDTC1,SLC9A1	79923,418
chr1:109761742-109762225	chr1	+	109761967	109762106	True	NM_006513,NM_001005290,NR_034072	chr1,chr1,chr1	+,-,+	SARS,PSRC1,SARS	-5505,63741,-5505
chr6:149805229-149805859	chr6	+	149805352	149805664	True	NM_207360,NM_138785	chr6,chr6	-,+	ZC3H12D,C6orf72	534,81863
chr3:195621658-195622049	chr3	+	195621738	195621990	True	NM_001098516,NM_001010938	chr3,chr3	+,-	MUC20,TNK2	-170698,492
chr7:16915303-16917207	chr7	+	16915647	16917081	True	NM_176813,NM_014399	chr7,chr7	-,+	AGR3,TSPAN13	4590,-122354
chr4:109547888-109548317	chr4	+	109547897	109548117	True	NM_000995,NM_033625,NR_026968	chr4,chr4,chr4	+,+,-	RPL34,RPL34,LOC285456	-6234,-6207,-6284
chr16:30064826-30065059	chr16	+	30064916	30065072	True	NM_000034,NM_031478	chr16,chr16	+,-	ALDOA,FAM57B	-476,-22730
chr17:57970083-57970498	chr17	+	57970087	57970495	True	NM_001193611,NM_001193610,NM_001193613,NM_001193612,NM_001193609,NM_016261,NM_003161	chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,-,+	TUBD1,TUBD1,TUBD1,TUBD1,TUBD1,TUBD1,RPS6KB1	-5,-5,-5,-5,-5,-5,-15
chr9:139304906-139305362	chr9	+	139304990	139305318	True	NM_006643,NM_015160,NM_001039707,NM_001039708	chr9,chr9,chr9,chr9	-,+,-,-	SDCCAG3,PMPCA,SDCCAG3,SDCCAG3	50,61,50,50
chr4:53510663-53511078	chr4	+	53510688	53510800	True	NR_024031,NM_001134223	chr4,chr4	+,-	KIAA0114,USP46	67820,12009
chrX:49056567-49056807	chrX	+	49056580	49056834	True	NM_002668,NM_003179	chrX,chrX	+,-	PLP2,SYP	-28447,67
chr1:175161015-175161423	chr1	+	175161064	175161436	True	NM_001162893,NM_022093,NM_014656,NM_001162895,NM_001162894	chr1,chr1,chr1,chr1,chr1	-,+,-,-,-	KIAA0040,TNN,KIAA0040,KIAA0040,KIAA0040	843,-124121,563,563,843
chr18:32108507-32110128	chr18	+	32108562	32110045	True	NM_003787,NM_032975	chr18,chr18	-,+	NOL4,DTNA	-305047,-35366
chr12:54581744-54581954	chr12	+	54581752	54581992	True	NR_026656,NM_014311	chr12,chr12	+,-	LOC400043,SMUG1	-61949,815
chr7:129249076-129250078	chr7	+	129249366	129249882	True	NR_029614,NM_005011	chr7,chr7	-,+	MIR182,NRF1	160500,1672
chr7:156929925-156930304	chr7	+	156930054	156930118	True	NM_005515,NM_014671	chr7,chr7	-,+	MNX1,UBE3C	-126707,1536
chr8:94765055-94765921	chr8	+	94765108	94765776	True	NM_001142301,NR_024522,NM_203390,NM_153704	chr8,chr8,chr8,chr8	+,+,-,+	TMEM67,TMEM67,RBM12B,TMEM67	1295,1295,-11884,1295
chr12:70004206-70004410	chr12	+	70004289	70004459	True	NM_201550,NM_001198842	chr12,chr12	-,+	LRRC10,CCT2	533,-24878
chr14:58066443-58067130	chr14	+	58066568	58067078	True	NM_001080455,NM_001011713	chr14,chr14	-,+	SLC35F4,NAA30	-2953,-209348
chr3:93690040-93691463	chr3	+	93690963	93691365	True	NM_144996,NM_000313,NM_182896,NM_001174151,NM_001174150,NR_033427	chr3,chr3,chr3,chr3,chr3,chr3	+,-,+,+,+,+	ARL13B,PROS1,ARL13B,ARL13B,ARL13B,ARL13B	7617,1627,7617,7617,7617,7617
chr3:46905610-46906258	chr3	+	46905622	46906128	True	NM_000316,NM_000258	chr3,chr3	+,-	PTH1R,MYL3	13107,-649
chr19:7028597-7030097	chr19	+	7028785	7030146	True	NM_001164419,NM_001136507	chr19,chr19	-,+	MBD3L4,MBD3L5	10096,447
chr19:7028597-7030097	chr19	-	7040631	7041992	False	NM_001164419,NM_144614	chr19,chr19	-,+	MBD3L4,MBD3L2	-447,7358
chr19:7028597-7030097	chr19	-	7059092	7060453	False	NM_001044388,NM_024341,NM_001164425,NM_144614,NM_001044387	chr19,chr19,chr19,chr19,chr19	+,+,-,+,+	ZNF557,ZNF557,MBD3L3,MBD3L2,ZNF557	9017,9017,-447,-9800,9017
chr8:32423729-32424519	chr8	+	32424016	32424361	True	NM_013964,NM_032664	chr8,chr8	+,-	NRG1,FUT10	-18339,906360
chr10:5859906-5860476	chr10	+	5860115	5860281	True	NM_001115156,NM_001494,NM_178150	chr10,chr10,chr10	-,-,+	GDI2,GDI2,FBXO18	-4603,-4603,71932
chr22:37884180-37885099	chr22	+	37884264	37885092	True	NM_001166343,NM_152243,NR_029413,NM_002405	chr22,chr22,chr22,chr22	-,+,-,-	MFNG,CDC42EP1,MFNG,MFNG	-1839,71378,-1786,-1786
chr2:139259479-139259750	chr2	+	139259532	139259698	True	NM_001001664,NM_007226	chr2,chr2	+,-	SPOPL,NXPH2	-233,278163
chr19:58194949-58195350	chr19	+	58195082	58195315	True	NM_001085384,NM_138347	chr19,chr19	-,+	ZNF154,ZNF551	25321,-1776
chr20:11876747-11878526	chr20	+	11876916	11878312	True	NM_181443,NM_000214	chr20,chr20	+,-	BTBD3,JAG1	-5490,-1222222
chr15:81293997-81294284	chr15	+	81294032	81294323	True	NM_022566,NM_015154	chr15,chr15	+,-	MESDC1,MESDC2	-788,-11827
chr6:35998386-35999340	chr6	+	35998508	35999359	True	NM_052961,NM_001193476,NM_001315,NM_139014,NM_139013,NM_139012,NM_138718	chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,-,+,+,+,+,-	SLC26A8,SLC26A8,MAPK14,MAPK14,MAPK14,MAPK14,SLC26A8	-6095,-6203,-3105,-3105,-3105,-3105,-6231
chr2:29114934-29115321	chr2	+	29115041	29115345	True	NM_017910,NM_015131	chr2,chr2	-,+	TRMT61B,WDR43	-21866,2187
chr14:92201163-92203162	chr14	+	92201566	92203198	True	NM_024764,NM_017437	chr14,chr14	-,+	CATSPERB,CPSF2	-3153,385099
chr22:38966222-38966565	chr22	+	38966510	38966588	True	NM_001002880,NM_007068	chr22,chr22	+,-	CBY1,DMC1	86069,-321
chr11:118756356-118757464	chr11	+	118756516	118757289	True	NM_001716,NM_182557,NM_032966	chr11,chr11,chr11	+,-,+	CXCR5,BCL9L,CXCR5	-2026,24374,6811
chr4:83294694-83295160	chr4	+	83294857	83295181	True	NM_001003810,NM_031369,NM_021204,NM_002138,NM_031370	chr4,chr4,chr4,chr4,chr4	-,-,+,-,-	HNRNPD,HNRNPD,ENOPH1,HNRNPD,HNRNPD	18,18,56544,18,18
chr3:5230721-5231444	chr3	+	5230760	5231217	True	NM_014674,NR_037903	chr3,chr3	+,-	EDEM1,LOC100507582	-1452,-282574
chr10:104222585-104223020	chr10	+	104222585	104222833	True	NM_024789,NM_024886	chr10,chr10	+,-	TMEM180,C10orf95	-1474,-11285
chr22:40393860-40394912	chr22	+	40393915	40394865	True	NM_152512,NM_138435	chr22,chr22	-,+	ENTHD1,FAM83F	-104121,-3013
chr6:13815017-13816339	chr6	+	13815037	13816180	True	NM_001165034,NM_001031713	chr6,chr6	+,-	RNF182,CCDC90A	108496,-248
chr1:89449520-89450037	chr1	+	89449606	89449763	True	NM_019610,NM_001008662,NM_001008661,NM_001162536,NM_006256	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	RBMXL1,CCBL2,CCBL2,RBMXL1,PKN2	8937,8937,8937,8937,-299735
chr12:56707683-56708667	chr12	+	56708303	56708697	True	NM_014255,NM_001190991,NM_016584	chr12,chr12,chr12	-,-,+	CNPY2,CNPY2,IL23A	1481,1481,23965
chr17:48426829-48427810	chr17	+	48427044	48427625	True	NM_016504,NM_022167	chr17,chr17	-,+	MRPL27,XYLT2	22999,-3702
chr15:52043284-52043558	chr15	+	52043334	52043544	True	NM_001143917,NM_014548,NM_001142885	chr15,chr15,chr15	-,+,+	LYSMD2,TMOD2,TMOD2	156,213,213
chr22:50691868-50692462	chr22	+	50692015	50692463	True	NM_032019,NM_002969,NM_031454,NM_020461,NM_001159286	chr22,chr22,chr22,chr22,chr22	-,-,+,-,-	HDAC10,MAPK12,SELO,TUBGCP6,HDAC10	-2181,7676,-52658,-8615,-2181
chrX:151935778-151936334	chrX	+	151935813	151936337	True	NM_001129826,NM_001129828,NM_005362,NM_004909,NM_001080848	chrX,chrX,chrX,chrX,chrX	+,+,-,+,+	CSAG3,CSAG3,MAGEA3,CSAG2,CSAG2	-8053,-8130,1953,-8130,-8130
chrX:151935778-151936334	chrX	-	151869139	151869583	False	NM_001129826,NM_005363,NM_001129828,NM_175868,NM_004909,NM_001080848	chrX,chrX,chrX,chrX,chrX,chrX	-,+,-,+,-,-	CSAG3,MAGEA6,CSAG3,MAGEA6,CSAG2,CSAG2	8137,-1945,8214,-1945,8214,8214
chr19:58281616-58282310	chr19	+	58281805	58282217	True	NM_017652,NM_001077426,NM_001204814,NM_024833	chr19,chr19,chr19,chr19	+,+,+,-	ZNF586,ZNF586,ZNF586,ZNF671	-836,-836,-836,-42810
chr2:226297461-226298455	chr2	+	226297466	226298345	True	NM_014689,NM_020864	chr2,chr2	-,+	DOCK10,KIAA1486	-390136,-31915
chr2:192119229-192119699	chr2	+	192119589	192119655	True	NM_001130158,NM_012223,NM_003151,NM_001161819	chr2,chr2,chr2,chr2	+,+,-,+	MYO1B,MYO1B,STAT4,MYO1B	-9539,-9539,-103664,-9392
chr15:75641636-75641875	chr15	+	75641661	75641841	True	NR_030360,NM_024608	chr15,chr15	-,+	MIR631,NEIL1	4235,-2381
chr16:81041072-81041566	chr16	+	81041247	81041374	True	NM_020188,NM_001100624,NM_018455,NM_001100625	chr16,chr16,chr16,chr16	-,+,+,+	C16orf61,CENPN,CENPN,CENPN	-745,-1195,-1195,-1195
chr1:150667293-150667906	chr1	+	150667294	150667603	True	NM_018178,NR_036211	chr1,chr1	-,+	GOLPH3L,MIR4257	2130,-142940
chr16:20756153-20756371	chr16	+	20756295	20756367	True	NM_202000,NM_017736	chr16,chr16	+,-	ACSM3,THUMPD1	18944,-3096
chr19:42723676-42724089	chr19	+	42723819	42724127	True	NM_133444,NM_133328	chr19,chr19	+,-	ZNF526,DEDD2	364,-2006
chr7:72974029-72975371	chr7	+	72974179	72975203	True	NM_001077621,NR_036682,NM_001707,NM_001197244	chr7,chr7,chr7,chr7	+,-,-,-	VPS37D,BCL7B,BCL7B,BCL7B	106970,-2577,-2114,-2114
chr11:108535161-108535607	chr11	+	108535229	108535579	True	NM_015065,NM_004398	chr11,chr11	-,+	EXPH5,DDX10	-70855,236
chr20:62482470-62482755	chr20	+	62482553	62482713	True	NM_080622,NM_025224	chr20,chr20	+,-	ABHD16B,ZBTB46	9852,-45697
chr12:104325523-104327145	chr12	+	104325536	104327193	True	NM_003299,NR_037425,NR_027249	chr12,chr12,chr12	+,+,-	HSP90B1,MIR3652,GNN	-1405,-1391,-1547
chr7:128829671-128829952	chr7	+	128829778	128829992	True	NM_005631,NR_034053	chr7,chr7	+,-	SMO,TNPO3	-1122,-134551
chr6:146224161-146224839	chr6	+	146224489	146224893	True	NM_001042683,NM_000838	chr6,chr6	-,+	SHPRH,GRM1	60396,123888
chr9:19750082-19750806	chr9	+	19750081	19750715	True	NM_001193288,NM_001010887	chr9,chr9	-,+	SLC24A2,ACER2	37934,-341208
chr2:208892813-208893385	chr2	+	208892999	208893142	True	NM_001080475,NM_001178000	chr2,chr2	-,+	PLEKHM3,PIKFYVE	-2715,237848
chr13:114018443-114018685	chr13	+	114018533	114018679	True	NM_024719,NM_005561	chr13,chr13	-,+	GRTP1,LAMP1	-70,-67115
chr2:24163687-24164181	chr2	+	24163798	24164107	True	NM_181713,NM_017552	chr2,chr2	+,-	UBXN2A,ATAD2B	-473,-13864
chr12:103995292-103996939	chr12	+	103995421	103996831	True	NM_017564,NM_001099336	chr12,chr12	+,-	STAB2,C12orf42	-14403,-105672
chr19:43033154-43034176	chr19	+	43033268	43034018	True	NM_001410,NM_001184816,NM_001184815,NM_001184813,NM_001024912,NM_001712	chr19,chr19,chr19,chr19,chr19,chr19	+,-,-,-,-,-	MEGF8,CEACAM1,CEACAM1,CEACAM1,CEACAM1,CEACAM1	-203558,-607,-607,-607,-607,-607
chr13:113623958-113625167	chr13	+	113624081	113625151	True	NM_024979,NR_034002,NM_001112732	chr13,chr13,chr13	+,-,+	MCF2L,MCF2L-AS1,MCF2L	8503,-1129,-1375
chr13:41363810-41364164	chr13	+	41363918	41364206	True	NM_005830,NM_014252	chr13,chr13	-,+	MRPS31,SLC25A15	-18571,-422
chr1:70354287-70354905	chr1	+	70354470	70354920	True	NM_017768,NR_023916	chr1,chr1	-,+	LRRC40,PIN1P1	316491,30084
chr8:11187900-11189589	chr8	+	11188998	11189124	True	NM_054028,NM_173683,NR_001578	chr8,chr8,chr8	+,-,+	AMAC1L2,XKR6,TDH	-554,-130123,8021
chr1:223845391-223847292	chr1	+	223845493	223847307	True	NM_001146068,NM_001143962	chr1,chr1	+,-	CAPN2,CAPN8	41987,6179
chrY:178708-179368	chrY	+	178713	179355	True	NM_018390,NM_012227	chrY,chrY	+,-	PLCXD1,GTPBP6	-30703,1582
chrY:178708-179368	chrX	+	228713	229355	False	NM_018390,NM_012227	chrX,chrX	+,-	PLCXD1,GTPBP6	-30703,1582
chr1:11863427-11864427	chr1	+	11863431	11864056	True	NM_001286,NM_021735,NM_021736,NM_021737,NM_005957	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	CLCN6,CLCN6,CLCN6,CLCN6,MTHFR	2150,2150,2150,2150,2155
chr10:105237197-105238525	chr10	+	105237215	105238515	True	NM_001129742,NM_004210	chr10,chr10	-,+	CALHM3,NEURL	532,15219
chr12:52776744-52777426	chr12	+	52776810	52777410	True	NM_033045,NM_002284	chr12,chr12	-,+	KRT84,KRT86	2057,-81212
chr1:62192390-62193011	chr1	+	62192551	62192620	True	NM_176877,NM_032027	chr1,chr1	+,-	INADL,TM2D1	15528,-1456
chr9:5431388-5432595	chr9	+	5431793	5432496	True	NM_014143,NM_018465	chr9,chr9	+,-	CD274,C9orf46	18006,5415
chr19:38827543-38827747	chr19	+	38827606	38827792	True	NM_001145463,NM_021185	chr19,chr19	-,+	YIF1B,CATSPERG	-21000,-1214
chr1:72730678-72732630	chr1	+	72730865	72732602	True	NM_153742,NM_173808	chr1,chr1	+,-	CTH,NEGR1	-1854022,15732
chr19:31843046-31843299	chr19	+	31843052	31843330	True	NM_020856,NR_026894	chr19,chr19	-,+	TSHZ3,DKFZp566F0947	-2862,-202320
chr1:6484353-6484553	chr1	+	6484478	6484592	True	NM_019089,NR_036218,NM_031475	chr1,chr1,chr1	-,-,+	HES2,MIR4252,ESPN	-4499,5414,255
chr22:21213666-21214035	chr22	+	21213668	21214015	True	NM_004782,NM_058004	chr22,chr22	+,-	SNAP29,PI4KA	-428,-598
chr19:50473632-50473902	chr19	+	50473631	50473869	True	NM_001135163,NM_052884,NR_002825	chr19,chr19,chr19	-,-,+	SIGLEC11,SIGLEC11,SIGLEC16	-9202,-9202,-770
chr19:50473632-50473902	chr19	-	51919914	51919964	False	NM_033130,NM_001171156,NM_001171157,NR_033235,NM_001171161,NM_001171160,NM_001171158,NM_001171159	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,+,-,-,-,-	SIGLEC10,SIGLEC10,SIGLEC10,LOC100129083,SIGLEC10,SIGLEC10,SIGLEC10,SIGLEC10	1143,1143,1143,-805,1143,1143,1143,1143
chr19:50473632-50473902	chr19	-	50463388	50463626	False	NM_001135163,NM_052884,NR_002825	chr19,chr19,chr19	-,-,+	SIGLEC11,SIGLEC11,SIGLEC16	853,853,9285
chr16:1659895-1660111	chr16	+	1659930	1660118	True	NM_020825,NM_014714	chr16,chr16	+,-	CRAMP1L,IFT140	4522,2041
chr1:245131910-245133031	chr1	+	245132121	245133021	True	NR_026587,NR_026586,NR_026588,NM_001143943,NM_032328,NM_031844	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-	EFCAB2,EFCAB2,EFCAB2,EFCAB2,EFCAB2,HNRNPU	609,262,609,609,149,-104294
chr18:21082652-21083160	chr18	+	21082695	21083145	True	NM_013326,NM_032933	chr18,chr18	+,-	C18orf8,C18orf45	316,-64770
chr3:119311942-119312761	chr3	+	119311980	119312809	True	NM_005191,NM_015900	chr3,chr3	-,+	CD80,PLA1A	-33499,3912
chrX:19908739-19909162	chrX	+	19908869	19909037	True	NM_031892,NM_001173456	chrX,chrX	-,+	SH3KBP1,PDHA1	-3125,-546911
chr20:62250692-62251128	chr20	+	62250838	62251146	True	NM_016434,NM_012384	chr20,chr20	+,-	RTEL1,GMEB2	38016,7285
chr16:29974437-29974863	chr16	+	29974660	29974872	True	NM_001083613,NM_003609,NM_194280	chr16,chr16,chr16	+,-,+	TMEM219,HIRIP3,TMEM219	-1360,32590,-1360
chr1:36108321-36108923	chr1	+	36108660	36108725	True	NM_178548,NM_002794,NM_001199779	chr1,chr1,chr1	+,-,-	TFAP2E,PSMB2,PSMB2	-69748,-1215,-1508
chr12:102832338-102833834	chr12	+	102832354	102833830	True	NM_001111284,NM_017915	chr12,chr12	-,+	IGF1,C12orf48	38650,-318454
chr6:18143946-18144903	chr6	+	18144296	18144534	True	NM_000367,NM_153042	chr6,chr6	-,+	TPMT,KDM1B	10900,11084
chr12:51442213-51442420	chr12	+	51442261	51442377	True	NM_001174125,NM_015416,NM_001024668	chr12,chr12,chr12	-,+,+	SLC11A2,LETMD1,LETMD1	-20203,-228,-228
chr14:78266085-78266385	chr14	+	78266187	78266311	True	NM_020421,NM_012245,NM_001142545	chr14,chr14,chr14	+,-,+	ADCK1,SNW1,ADCK1	114,-38690,114
chr14:94982123-94982749	chr14	+	94982148	94982710	True	NM_173850,NM_006215	chr14,chr14	-,+	SERPINA12,SERPINA4	1521,45072
chrX:48780396-48780943	chrX	+	48780487	48780975	True	NM_006875,NM_001167992	chrX,chrX	-,+	PIM2,PQBP1	-4074,-24763
chr4:122618395-122619161	chr4	+	122618516	122619142	True	NR_024365,NM_001154	chr4,chr4	+,-	LOC100192379,ANXA5	66597,-369
chr16:3016078-3016538	chr16	+	3016138	3016556	True	NM_172229,NM_152341,NM_004203,NM_024507	chr16,chr16,chr16,chr16	+,+,-,+	KREMEN2,PAQR4,PKMYT1,KREMEN2	-1972,2785,14034,-1972
chr8:145735115-145735352	chr8	+	145735169	145735243	True	NM_005309,NM_004260,NM_014665,NM_138431	chr8,chr8,chr8,chr8	+,-,+,+	GPT,RECQL4,LRRC14,MFSD3	-5755,8017,8119,-668
chr3:107250846-107251714	chr3	+	107251110	107251766	True	NM_001142568,NM_020235,NR_028303	chr3,chr3,chr3	+,+,-	BBX,BBX,LOC100302640	-9389,-9389,-291625
chr3:49030257-49031014	chr3	+	49030391	49031018	True	NM_001009996,NM_177938,NM_177939	chr3,chr3,chr3	-,+,+	DALRD3,P4HTM,P4HTM	25049,-3101,-3101
chr1:100321104-100322595	chr1	+	100321556	100321802	True	NM_000643,NM_000642,NM_000645,NM_000644,NM_000646,NM_000028,NM_001013660	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,+,-	AGL,AGL,AGL,AGL,AGL,AGL,FRRS1	-5575,-5980,4963,-5575,-5089,-5575,-90207
chr5:137900036-137901200	chr5	+	137900594	137901226	True	NM_001964,NR_002913	chr5,chr5	+,-	EGR1,SNORD63	-99471,-3795
chr5:119848838-119849612	chr5	+	119848886	119849459	True	NM_173666,NM_016644	chr5,chr5	-,+	DTWD2,PRR16	-1524646,-48918
chr10:116289708-116290451	chr10	+	116289953	116290224	True	NM_198496,NM_006720	chr10,chr10	+,-	VWA2,ABLIM1	-290988,-3268
chr19:57088148-57089266	chr19	+	57088236	57089212	True	NM_001005850,NM_001001668	chr19,chr19	-,+	ZNF835,ZNF470	95084,-9404
chr1:152878958-152879888	chr1	+	152879050	152879834	True	NM_178351,NM_005547	chr1,chr1	-,+	LCE1C,IVL	-99943,1204
chr4:74267011-74267673	chr4	+	74267017	74267677	True	NM_000477,NM_198889	chr4,chr4	+,-	ALB,ANKRD17	2294,-142515
chr15:40698092-40699155	chr15	+	40698098	40699003	True	NM_207380,NM_002225,NM_001159508	chr15,chr15,chr15	-,+,+	C15orf52,IVD,IVD	-64930,-463,-463
chr12:12933811-12934620	chr12	+	12933827	12934465	True	NM_030817,NM_006143	chr12,chr12	+,-	APOLD1,GPR19	4075,-84706
chr17:47573391-47573662	chr17	+	47573482	47573630	True	NM_002634,NM_002507	chr17,chr17	-,+	PHB,NGFR	-81240,-878
chr2:179053125-179054842	chr2	+	179053135	179054412	True	NM_001201482,NM_001201480,NM_001201481,NM_001077197,NM_032523	chr2,chr2,chr2,chr2,chr2	+,+,+,-,+	OSBPL6,OSBPL6,OSBPL6,PDE11A,OSBPL6	4795,4795,4795,-80069,4795
chr19:11993634-11994397	chr19	+	11993768	11994398	True	NM_021915,NM_001080493	chr19,chr19	+,-	ZNF69,ZNF823	4271,-144008
chr17:10588114-10589481	chr17	+	10588267	10589051	True	NM_004589,NM_020233	chr17,chr17	-,+	SCO1,C17orf48	11884,11875
chr10:97890253-97892051	chr10	+	97890374	97892062	True	NM_014803,NR_036113	chr10,chr10	+,-	ZNF518A,MIR3157	-953,-66218
chr3:149766307-149767746	chr3	+	149766322	149767331	True	NM_053024,NR_036538	chr3,chr3	-,+	PFN2,LOC646903	-77581,-77313
chr16:20083457-20084762	chr16	+	20083546	20084713	True	NM_001002911,NM_017888	chr16,chr16	-,+	GPR139,ACSM5	438,336142
chr17:18650531-18651646	chr17	+	18650914	18651458	True	NM_001145045,NM_031456	chr17,chr17	-,+	ZNF286B,FBXW10	-65342,-3647
chr17:18650531-18651646	chr17	-	15518918	15519460	False	NM_006382,NM_001130842	chr17,chr17	-,+	CDRT1,ZNF286A	3616,83430
chr3:125635698-125636163	chr3	+	125635800	125636054	True	NM_001015050,NR_024251,NR_024250	chr3,chr3,chr3	-,+,+	ALG1L,LOC100125556,LOC100125556	19883,-408,-408
chr11:123605680-123606314	chr11	+	123605922	123606300	True	NM_003455,NM_001005197	chr11,chr11	-,+	ZNF202,OR8D4	6113,170838
chr3:158362540-158363590	chr3	+	158362594	158363608	True	NM_024996,NM_020169	chr3,chr3	+,-	GFM1,LXN	-328,26937
chr11:67203622-67204093	chr11	+	67203641	67203997	True	NM_020441,NM_001018070,NM_003952,NM_005608	chr11,chr11,chr11,chr11	-,-,+,-	CORO1B,CORO1B,RPS6KB2,PTPRCAP	7036,7316,-7757,1206
chr7:127228847-127229223	chr7	+	127228848	127229184	True	NM_024523,NM_020369,NM_001662	chr7,chr7,chr7	-,+,+	GCC1,FSCN3,ARF5	-3194,4504,-493
chr12:103351598-103351853	chr12	+	103351601	103351775	True	NM_000277,NM_004316	chr12,chr12	-,+	PAH,ASCL1	-40220,-200
chr20:1301784-1303649	chr20	+	1302416	1303678	True	NM_015685,NM_014723,NM_001199784,NM_080489	chr20,chr20,chr20,chr20	-,+,-,-	SDCBP2,SNPH,SDCBP2,SDCBP2	-8099,-55514,2885,6251
chr3:158523720-158524588	chr3	+	158523784	158524366	True	NM_002888,NM_001167903,NM_022736	chr3,chr3,chr3	-,+,+	RARRES1,MFSD1,MFSD1	-73509,-4127,-4127
chr6:10418862-10419405	chr6	+	10418901	10419097	True	NM_001032280,NM_003220,NM_001042425,NR_033910	chr6,chr6,chr6,chr6	-,-,-,+	TFAP2A,TFAP2A,TFAP2A,LOC100130275	-6294,-3431,750,-6401
chr6:43341795-43342668	chr6	+	43342365	43342440	True	NM_014345,NM_001198934	chr6,chr6	-,+	ZNF318,ABCC10	-5184,52851
chr2:101768489-101768986	chr2	+	101768573	101768842	True	NM_001102426,NM_017546	chr2,chr2	-,+	TBC1D8,C2orf29	-727,100502
chr22:31890425-31891293	chr22	+	31890717	31891135	True	NM_001164501,NM_014775,NM_001007467,NM_001164502,NM_019843	chr22,chr22,chr22,chr22,chr22	-,+,+,-,-	EIF4ENIF1,SFI1,SFI1,EIF4ENIF1,EIF4ENIF1	-5170,1125,1125,-4843,-4843
chr5:102455389-102455673	chr5	+	102455393	102455697	True	NM_015216,NM_017676	chr5,chr5	+,-	PPIP5K2,GIN1	9559,195
chr17:5340815-5341448	chr17	+	5340942	5341374	True	NR_027685,NM_001212	chr17,chr17	+,-	RPAIN,C1QBP	-18046,1147
chr8:128806896-128807190	chr8	+	128806903	128807233	True	NR_003367,NR_024393,NR_031609	chr8,chr8,chr8	+,-,+	PVT1,LOC727677,MIR1204	-175,-312519,974
chr15:23441552-23441982	chr15	+	23441676	23441776	True	NR_002824,NR_033350	chr15,chr15	-,+	HERC2P2,GOLGA8E	-63417,-6657
chr15:23441552-23441982	chr15	+	28630416	28630508	False	NM_004667,NR_033351,NR_033353	chr15,chr15,chr15	-,+,+	HERC2,GOLGA8F,GOLGA8G	-63121,-6725,-6725
chr15:23441552-23441982	chr15	-	28771419	28771511	False	NR_036443,NR_033351,NR_033353	chr15,chr15,chr15	+,-,-	HERC2P9,GOLGA8F,GOLGA8G	128076,6724,6724
chr15:23441552-23441982	chr15	+	20774278	20774378	False	NM_001145004,NR_027411	chr15,chr15	-,+	GOLGA6L6,GOLGA8C	-27164,-6655
chr15:23441552-23441982	chr15	-	22709001	22709093	False	NR_027407,NM_001001413	chr15,chr15	-,+	GOLGA8DP,GOLGA6L1	6727,27152
chr15:23441552-23441982	chr15	+	23606513	23606584	False	NR_002824,NR_033350	chr15,chr15	-,+	HERC2P2,GOLGA8E	-228254,-171515
chr20:17547714-17548160	chr20	+	17547714	17548050	True	NM_001011546,NM_001161705,NM_006870	chr20,chr20,chr20	+,-,+	DSTN,BFSP1,DSTN	2548,-8109,2548
chr1:182925151-182927050	chr1	+	182925157	182927057	True	NM_030933,NM_002293	chr1,chr1	-,+	SHCBP1L,LAMC1	-2604,65537
chr6:170862430-170863299	chr6	+	170862488	170863271	True	NM_001172085,NM_002793	chr6,chr6	+,-	TBP,PSMB1	149,-71
chr8:119122692-119123036	chr8	+	119122714	119123000	True	NM_080651,NM_000127	chr8,chr8	+,-	MED30,EXT1	-589807,1108
chr9:95898357-95898966	chr9	+	95898514	95899012	True	NM_004148,NM_032310	chr9,chr9	-,+	NINJ1,C9orf89	-1944,-40115
chr10:13339755-13340420	chr10	+	13339796	13340274	True	NM_006214,NM_001037537,NM_182751	chr10,chr10,chr10	-,-,+	PHYH,PHYH,MCM10	1914,1530,-136293
chr19:13884865-13885243	chr19	+	13884948	13885210	True	NM_032285,NR_036515,NM_014047,NM_001031727	chr19,chr19,chr19,chr19	+,-,+,+	MRI1,LOC284454,C19orf53,MRI1	-9664,61943,46,-9664
chr4:330713-330933	chr4	+	330795	330909	True	NM_001137608,NM_003441	chr4,chr4	-,+	ZNF732,ZNF141	-40851,686
chr2:219821900-219822379	chr2	+	219821901	219822377	True	NM_003936,NM_017521	chr2,chr2	+,-	CDK5R2,FEV	2020,28052
chr8:7308704-7310651	chr8	+	7308748	7310635	True	NM_058206,NM_058207,NM_001040703	chr8,chr8,chr8	-,-,+	SPAG11B,SPAG11B,DEFB105B	-82,-82,34607
chr8:7308704-7310651	chr8	-	7715953	7717537	False	NM_152250,NM_058203	chr8,chr8	-,+	DEFB105A,SPAG11B	-34593,-10602
chr2:128437327-128437720	chr2	+	128437330	128437706	True	NM_001161404,NM_001136037,NM_001161403,NM_032740	chr2,chr2,chr2,chr2	-,-,-,+	LIMS2,LIMS2,LIMS2,SFT2D3	1704,-4566,-4566,20890
chr17:48613124-48613510	chr17	+	48613160	48613394	True	NM_017957,NM_001267	chr17,chr17	+,-	EPN3,CHAD	-3173,-66933
chrX:46772510-46772731	chrX	+	46772592	46772780	True	NM_032591,NM_001077445,NM_014735	chrX,chrX,chrX	-,+,+	SLC9A7,PHF16,PHF16	-154120,-907,-775
chr5:149887112-149887785	chr5	+	149887191	149887767	True	NM_001025070,NM_001543	chr5,chr5	-,+	RPS14,NDST1	-57872,46
chr3:46743718-46744918	chr3	+	46743723	46744917	True	NM_001190707,NM_147196,NR_033815,NM_147129	chr3,chr3,chr3,chr3	-,+,-,-	ALS2CL,TMIE,ALS2CL,ALS2CL	-8577,-951,-8529,-8529
chr5:755554-755891	chr5	+	755566	755814	True	NM_001166260,NM_007030	chr5,chr5	+,-	TRIP13,TPPP	137154,-62056
chr5:755554-755891	chr5	+	848082	848330	False	NM_001166260,NM_024786	chr5,chr5	+,-	TRIP13,ZDHHC11	44638,2821
chr18:21244388-21246027	chr18	+	21244740	21245915	True	NM_001127717,NM_173505	chr18,chr18	+,-	LAMA3,ANKRD29	23646,-1891
chr21:19173880-19174518	chr21	+	19174169	19174490	True	NM_001100420,NM_001204175	chr21,chr21	-,+	C21orf91,CHODL	17273,115166
chr11:64886094-64886826	chr11	+	64886153	64886525	True	NM_001997,NR_037568,NR_037567,NM_014205,NM_003273,NM_004927	chr11,chr11,chr11,chr11,chr11,chr11	-,+,+,-,+,+	FAU,MRPL49,MRPL49,ZNHIT2,TM7SF2,MRPL49	3197,3190,3129,-983,-6863,3190
chr2:158702219-158702621	chr2	+	158702222	158702493	True	NM_001105,NM_001135098	chr2,chr2	-,+	ACVR1,UPP2	29187,149197
chr17:72357285-72357750	chr17	+	72357328	72357694	True	NM_181790,NM_001080466	chr17,chr17	+,-	GPR142,BTBD17	5950,314
chr5:179492480-179493755	chr5	+	179492851	179493555	True	NM_003900,NM_018434	chr5,chr5	+,-	SQSTM1,RNF130	-245068,5610
chr2:46523861-46524086	chr2	+	46523890	46524006	True	NM_001430,NM_080653	chr2,chr2	+,-	EPAS1,ATP6V1E2	534,223140
chr16:32941511-32941967	chr17	+	36639009	36639059	True	NM_025248,NM_001199417	chr17,chr17	-,+	SRCIN1,ARHGAP23	123174,-54340
chr2:20850414-20850655	chr2	+	20850448	20850578	True	NM_022460,NM_182828	chr2,chr2	-,+	HS1BP3,GDF7	336,15845
chr2:101030402-101032381	chr2	+	101030446	101032410	True	NM_004854,NM_001011717	chr2,chr2	-,+	CHST10,NMS	1772,54533
chr1:47280954-47282233	chr1	+	47281187	47282234	True	NM_001099772,NR_002788	chr1,chr1	+,-	CYP4B1,CYP4Z2P	-16569,83964
chr1:155109085-155110125	chr1	+	155109226	155110016	True	NM_004428,NM_018973,NM_153741,NM_018845,NM_001122839,NM_001122837,NM_182685	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,+,+,+,+	EFNA1,DPM3,DPM3,SLC50A1,SLC50A1,SLC50A1,EFNA1	-8928,2917,3030,-989,-989,-989,-8928
chr1:87596383-87596932	chr1	+	87596385	87596886	True	NR_026989,NR_026988,NR_026987,NR_026986,NR_026985,NM_203341	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-	LOC339524,LOC339524,LOC339524,LOC339524,LOC339524,SEP15	-988,-988,722,722,722,-216278
chr11:14664560-14665087	chr11	+	14664563	14664869	True	NM_148976,NM_000922	chr11,chr11	-,+	PSMA1,PDE3B	361,399
chr1:145612104-145612853	chr1	+	145612123	145612670	True	NM_014455,NM_006468	chr1,chr1	+,-	RNF115,POLR3C	-1139,-1239
chr1:145612104-145612853	chr1	-	146008162	146008713	False	NM_001101663,NM_001097616	chr1,chr1	-,+	NBPF24,GPR89C	59583,-124352
chr1:145612104-145612853	chr1	-	147549939	147550490	False	NM_001101663,NM_001097616	chr1,chr1	-,+	NBPF24,GPR89C	59642,-124430
chr7:128211980-128213528	chr7	+	128212060	128213503	True	NM_183243,NR_024368	chr7,chr7	-,+	IMPDH1,FLJ45340	-162024,67791
chr19:51523925-51524903	chr19	+	51524220	51524682	True	NM_002776,NM_001136032,NM_145888,NM_001077500,NM_001167605,NM_006853,NM_144947,NM_014441	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,+	KLK10,KLK11,KLK10,KLK10,KLK11,KLK11,KLK11,SIGLEC9	-938,5240,-1266,-789,6658,6658,6253,103454
chr1:38259288-38259488	chr1	+	38259354	38259420	True	NM_001031740,NM_152496,NM_001113482,NM_024640	chr1,chr1,chr1,chr1	+,+,+,-	MANEAL,MANEAL,MANEAL,YRDC	353,1739,353,14495
chr5:145563247-145563495	chr5	+	145563264	145563338	True	NM_020117,NM_018989	chr5,chr5	-,+	LARS,RBM27	-970,19824
chr11:67769984-67770355	chr11	+	67770247	67770317	True	NM_030930,NM_001030010,NM_000694,NM_001161473	chr11,chr11,chr11,chr11	-,+,+,+	UNC93B1,ALDH3B1,ALDH3B1,ALDH3B1	1326,7472,7472,5730
chr1:120437111-120438803	chr1	+	120437128	120438652	True	NM_021794,NM_006623	chr1,chr1	-,+	ADAM30,PHGDH	545,-182760
chr12:64217155-64217660	chr12	+	64217210	64217697	True	NM_020762,NM_173812	chr12,chr12	+,-	SRGAP1,DPY19L2	20843,-154856
chr1:91418317-91420122	chr1	+	91418380	91419937	True	NM_016620,NM_001134419	chr1,chr1	-,+	ZNF644,CDC7	67151,546466
chr16:5119977-5121729	chr16	+	5120103	5121527	True	NM_001098514,NM_019109,NM_152459	chr16,chr16,chr16	-,+,-	C16orf89,ALG1,C16orf89	-3992,282,-3992
chr17:80190326-80190706	chr17	+	80190362	80190630	True	NM_001042423,NM_001042422,NM_004207,NM_198082	chr17,chr17,chr17,chr17	+,+,+,-	SLC16A3,SLC16A3,SLC16A3,CCDC57	-269,-4120,-3524,-19673
chr19:3608908-3609708	chr19	+	3608912	3609744	True	NM_001060,NM_133261,NM_201636	chr19,chr19,chr19	-,+,-	TBXA2R,GIPC3,TBXA2R	-2081,-23394,-2081
chr1:157514220-157514807	chr1	+	157514310	157514818	True	NM_001195388,NM_031281,NR_001560	chr1,chr1,chr1	-,-,+	FCRL5,FCRL5,CYCSP52	7542,7542,-416207
chr20:13045102-13046101	chr20	+	13045229	13046119	True	NM_018327,NM_017714	chr20,chr20	+,-	SPTLC3,TASP1	-55663,573523
chr2:149895570-149895805	chr2	+	149895583	149895851	True	NM_015702,NM_177964	chr2,chr2	-,+	MMADHC,LYPD6B	548531,-653
chr11:69636102-69636400	chr11	+	69636254	69636386	True	NM_005247,NM_053056	chr11,chr11	-,+	FGF3,CCND1	-2062,-180432
chr15:79574861-79575139	chr15	+	79575035	79575167	True	NM_001146341,NM_002891	chr15,chr15	+,-	ANKRD34C,RASGRF1	6,-191820
chr3:124447815-124449177	chr3	+	124447854	124449088	True	NM_002213,NR_033437,NR_033434,NM_000373	chr3,chr3,chr3,chr3	-,+,+,+	ITGB5,UMPS,UMPS,UMPS	157106,124,124,124
chr11:33099632-33100455	chr11	+	33099854	33100482	True	NR_015451,NM_001326	chr11,chr11	+,-	NCRNA00294,CSTF3	-2222,82605
chr4:71111713-71112680	chr4	+	71111716	71112715	True	NM_001891,NM_005212	chr4,chr4	-,+	CSN2,CSN3	-284990,-3435
chr4:78780420-78781403	chr4	+	78780454	78781294	True	NM_020236,NM_144571	chr4,chr4	+,-	MRPL1,CNOT6L	2510,-39910
chr7:45959132-45959831	chr7	+	45959139	45959820	True	NM_000596,NM_000598,NM_001013398	chr7,chr7,chr7	+,-,-	IGFBP1,IGFBP3,IGFBP3	-31238,1104,1104
chr6:4080033-4080640	chr6	+	4080035	4080592	True	NM_001085401,NM_173563	chr6,chr6	+,-	C6orf201,C6orf146	-649,-578
chr11:77185586-77185979	chr11	+	77185612	77186007	True	NM_001128620,NM_002576,NM_173039	chr11,chr11,chr11	-,-,+	PAK1,PAK1,AQP11	-504,-504,114672
chr3:2167400-2167827	chr3	+	2167640	2167781	True	NM_175607,NM_000564	chr3,chr3	+,-	CNTN4,IL5RA	-27154,984340
chr9:135822511-135822878	chr9	+	135822546	135822781	True	NM_001135031,NM_001162426,NM_001162427,NM_000368	chr9,chr9,chr9,chr9	+,-,-,-	GFI1B,TSC1,TSC1,TSC1	31316,-2526,-2526,-2526
chr1:157158626-157159179	chr1	+	157158667	157158957	True	NM_001145312,NR_001560	chr1,chr1	-,+	ETV3,CYCSP52	-50284,-60565
chr7:128502048-128502830	chr7	+	128502207	128502821	True	NM_001198909,NM_001195150,NM_004231,NM_001135914	chr7,chr7,chr7,chr7	+,+,+,-	ATP6V1F,LOC100130705,ATP6V1F,KCP	35,3642,35,48002
chr19:19374468-19375369	chr19	+	19374628	19375386	True	NM_023002,NM_001001524,NM_004386	chr19,chr19,chr19	-,-,+	HAPLN4,TM6SF2,NCAN	-1032,8738,-51898
chr17:79668744-79669592	chr17	+	79668788	79669588	True	NM_001040025,NM_002949,NM_012140	chr17,chr17,chr17	-,+,+	ARL16,MRPL12,SLC25A10	-17834,811,9782
chr1:14924533-14924764	chr1	+	14924538	14924802	True	NM_201628,NM_015209,NR_027136	chr1,chr1,chr1	+,+,-	KAZN,KAZN,C1orf126	410,410,554208
chr1:121261342-121261903	chr1	+	121261410	121261740	True	NR_003955,NM_001017986	chr1,chr1	+,-	EMBP1,FCGR1B	-551,-325466
chr3:42640616-42640904	chr3	+	42640799	42640909	True	NM_001201572,NM_016305,NM_005385	chr3,chr3,chr3	-,+,+	SEC22C,SS18L2,NKTR	1713,-8554,1237
chr1:54518778-54519293	chr1	+	54518872	54519250	True	NM_153035,NM_004872	chr1,chr1	+,-	TCEANC2,TMEM59	23,-47
chr1:47696183-47696503	chr1	+	47696225	47696495	True	NM_001010969,NM_003189	chr1,chr1	+,-	CYP4A22,TAL1	-93169,-782
chr2:19556985-19557344	chr2	+	19557033	19557257	True	NM_145260,NR_033875	chr2,chr2	-,+	OSR1,FLJ12334	1165,511357
chr1:27700079-27700711	chr1	+	27700357	27700723	True	NM_003665,NM_207397,NM_005281,NM_004672,NM_173452	chr1,chr1,chr1,chr1,chr1	-,-,+,-,-	FCN3,CD164L2,GPR3,MAP3K6,FCN3	642,9132,18428,-7020,642
chr1:153935029-153935567	chr1	+	153935206	153935548	True	NM_014437,NM_130898,NM_181715	chr1,chr1,chr1	-,+,-	SLC39A1,CREB3L4,CRTC2	4690,4848,-4074
chr4:90749650-90750894	chr4	+	90749681	90750936	True	NM_000345,NM_001146054,NM_007351,NM_001146055,NM_007308	chr4,chr4,chr4,chr4,chr4	-,-,+,-,-	SNCA,SNCA,MMRN1,SNCA,SNCA	7464,7241,65115,8561,7241
chr4:100815172-100815645	chr4	+	100815210	100815652	True	NM_021970,NR_024170,NR_002799	chr4,chr4,chr4	-,-,+	LAMTOR3,LAMTOR3,LOC256880	101,101,55983
chr6:3229752-3229985	chr6	+	3229783	3229931	True	NM_001135750,NM_178012	chr6,chr6	+,-	PSMG4,TUBB2B	29230,-1815
chr5:31793836-31794598	chr5	+	31793977	31794344	True	NR_036241,NM_178140	chr5,chr5	-,+	MIR4279,PDZD2	141978,4686
chr16:66833221-66833986	chr16	+	66833532	66833884	True	NM_005182,NM_001136505	chr16,chr16	+,-	CA7,CCDC79	44397,1689
chr12:54447036-54447365	chr12	+	54447157	54447281	True	NM_153633,NR_026655,NR_026658	chr12,chr12,chr12	+,+,-	HOXC4,FLJ12825,LOC100240735	379,4756,28376
chr2:113875510-113876236	chr2	+	113875515	113876153	True	NM_000577,NM_173843,NM_173841,NM_173178,NM_173842	chr2,chr2,chr2,chr2,chr2	+,+,+,-,+	IL1RN,IL1RN,IL1RN,IL1F8,IL1RN	-96,-96,-96,-65075,8984
chr15:65319253-65320706	chr15	+	65319322	65320470	True	NM_178859,NM_139242	chr15,chr15	+,-	OSTBETA,MTFMT	17237,1557
chr14:24023459-24023744	chr14	+	24023464	24023680	True	NR_023314,NM_024328,NM_033400,NM_001126339	chr14,chr14,chr14,chr14	+,+,-,+	THTPA,THTPA,ZFHX2,THTPA	1517,1517,-2606,1517
chr13:99854547-99856031	chr13	+	99854579	99856007	True	NM_001144072,NR_026644,NR_036531,NM_177967,NR_036532	chr13,chr13,chr13,chr13,chr13	+,+,-,+,-	UBAC2,UBAC2,LOC100289373,UBAC2,LOC100289373	-1952,-1468,-1568,-1468,-1570
chr15:101839243-101839550	chr15	+	101839480	101839586	True	NM_024652,NM_003090	chr15,chr15	+,-	LRRK1,SNRPA1	-380071,-4020
chr9:139981263-139981682	chr9	+	139981292	139981642	True	NM_207309,NM_016219,NR_027447	chr9,chr9,chr9	+,+,-	UAP1L1,MAN1B1,LOC100289341	-9390,-12,-23
chr19:51509228-51509912	chr19	+	51509426	51509946	True	NM_012315,NM_144505,NM_144507,NM_144506,NM_014441,NM_007196	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,+,-	KLK9,KLK8,KLK8,KLK8,SIGLEC9,KLK8	2994,-4468,-4468,-4468,118190,-4468
chr13:33004949-33005766	chr13	+	33005273	33005753	True	NM_000059,NM_052818,NM_001079691	chr13,chr13,chr13	+,-,-	BRCA2,N4BP2L1,N4BP2L1	-115715,-2958,-2958
chr6:163149014-163149354	chr6	+	163149013	163149345	True	NM_152410,NM_004562,NM_013987,NM_001080379,NM_001080378,NM_013988	chr6,chr6,chr6,chr6,chr6,chr6	+,-,-,+,+,-	PACRG,PARK2,PARK2,PACRG,PACRG,PARK2	-900,-179,-179,-62,-900,-179
chr19:35070325-35071082	chr19	+	35070325	35070757	True	NR_027620,NM_001080436,NM_001012320	chr19,chr19,chr19	-,+,+	LOC643719,WTIP,ZNF302	-1729,-97496,97809
chr22:43541527-43542203	chr22	+	43541731	43541796	True	NM_173467,NM_014507,NM_007311,NM_000714	chr22,chr22,chr22,chr22	-,-,+,+	MCAT,MCAT,TSPO,TSPO	-2328,-2328,5738,5738
chrX:1654864-1655908	chrY	+	1604907	1605907	False	NM_178129,NR_027383	chrY,chrY	-,+	P2RY8,AKAP17A	180,54578
chrX:1654864-1655908	chrX	+	1654907	1655907	True	NM_178129,NR_027383	chrX,chrX	-,+	P2RY8,AKAP17A	180,54578
chr4:21853828-21854959	chr4	+	21853834	21854976	True	NR_002813,NM_001128432	chr4,chr4	-,+	NCRNA00099,GBA3	91,839571
chr7:143532295-143532563	chr7	+	143532352	143532590	True	NR_015421,NM_001004685	chr7,chr7	-,+	LOC154761,OR2F2	1270,99735
chr7:143532295-143532563	chr7	-	143319255	143319493	False	NM_178561,NM_001130025,NM_173678	chr7,chr7,chr7	-,+,+	CTAGE6P,FAM115C,FAM115C	135400,-1261,-764
chr7:143532295-143532563	chr7	-	143398444	143398682	False	NM_178561,NM_001130026	chr7,chr7	-,+	CTAGE6P,FAM115C	56211,14256
chr1:161993835-161994361	chr1	+	161993931	161994405	True	NM_001164757,NM_015441	chr1,chr1	+,-	NOS1AP,OLFML2B	45175,-287
chr9:137774427-137774931	chr9	+	137774631	137774919	True	NR_037460,NM_015837,NM_004108	chr9,chr9,chr9	-,+,+	MIR3689A,FCN2,FCN2	-32141,-2024,-2024
chr9:35657934-35658271	chr9	+	35657980	35658243	True	NM_032818,NM_014450,NM_001195201,NM_001195200,NR_003051,NM_001195217,NM_174923	chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,-,+,+,-,+,+	C9orf100,SIT1,CCDC107,CCDC107,RMRP,CCDC107,CCDC107	7090,-7033,43,43,7,43,43
chr6:41039706-41040122	chr6	+	41039712	41040100	True	NM_021705,NM_145063,NM_002505	chr6,chr6,chr6	+,-,+	NFYA,C6orf130,NFYA	606,138,606
chr1:210405864-210406200	chr1	+	210406092	210406158	True	NR_024337,NM_019605	chr1,chr1	-,+	C1orf133,SERTAD4	1358,36
chr7:44230174-44230898	chr7	+	44230205	44230863	True	NM_006555,NM_000162	chr7,chr7	+,-	YKT6,GCK	9714,-1183
chr16:717083-717482	chr16	+	717114	717524	True	NM_001005920,NM_003961,NM_138769	chr16,chr16,chr16	-,+,+	JMJD8,RHBDL1,RHOT2	16965,8550,608
chr17:72522251-72522774	chr17	+	72522320	72522534	True	NM_152460,NM_174892	chr17,chr17	+,-	C17orf77,CD300LB	58522,5137
chr8:109094329-109094538	chr8	+	109094353	109094539	True	NM_178565,NM_014673	chr8,chr8	-,+	RSPO2,TTC35	1424,361313
chr6:128089467-128091155	chr6	+	128089576	128090720	True	NM_001010923,NM_001010905	chr6,chr6	-,+	THEMIS,C6orf58	131556,-191314
chr17:34200282-34201705	chr17	+	34200542	34201146	True	NM_152781,NM_003487,NM_002985	chr17,chr17,chr17	-,+,-	C17orf66,TAF15,CCL5	-4647,-64105,6281
chr5:96444733-96444940	chr5	+	96444736	96444927	True	NM_153234,NM_175920	chr5,chr5	-,+	LIX1,LNPEP	33644,-150631
chr4:164487095-164487445	chr4	+	164487101	164487417	True	NM_017923,NM_018352	chr4,chr4	-,+	MARCH1,C4orf43	47409,-71484
chrY:24546245-24547023	chrY	+	24546322	24546538	True	NM_001006117,NR_002175	chrY,chrY	+,-	RBMY1J,TTTY6B	3084,41096
chrY:24546245-24547023	chrY	-	24332173	24332389	False	NM_001006117,NR_002175,NM_152585	chrY,chrY,chrY	-,+,-	RBMY1J,TTTY6B,RBMY1F	-3084,-41090,-3084
chr21:46827045-46827556	chr21	+	46827110	46827490	True	NM_130445,NR_028082	chr21,chr21	+,-	COL18A1,NCRNA00175	-2064,17515
chr22:30719882-30720494	chr22	+	30720000	30720392	True	NM_001204240,NM_031937,NM_001017437	chr22,chr22,chr22	-,-,+	TBC1D10A,TBC1D10A,CCDC157	2613,2613,32234
chr9:139139600-139140245	chr9	+	139139901	139140283	True	NM_015597,NM_181701	chr9,chr9	+,-	GPSM1,QSOX2	81648,-2214
chr10:115438882-115439365	chr10	+	115438920	115439409	True	NM_198060,NM_001227,NM_033339,NM_033340,NM_033338	chr10,chr10,chr10,chr10,chr10	-,+,+,+,+	NRAP,CASP7,CASP7,CASP7,CASP7	-15115,16,16,-36,16
chr2:106463948-106464860	chr2	+	106464277	106464879	True	NM_025076,NM_001004720	chr2,chr2	-,+	UXS1,NCK2	345966,3324
chr10:51613282-51614800	chr10	+	51613324	51614537	True	NM_001145262,NM_006327	chr10,chr10	+,-	NCOA4,TIMM23	-37095,8862
chr10:51613282-51614800	chr10	-	51380212	51381425	False	NM_003631,NR_029388,NM_002443	chr10,chr10,chr10	-,-,+	PARG,LOC728407,MSMB	-8881,-8896,168127
chr1:29512220-29513815	chr1	+	29512243	29513728	True	NM_005626,NM_001195001	chr1,chr1	-,+	SRSF4,PTPRU	-3606,49299
chr5:74632499-74633092	chr5	+	74632615	74633041	True	NM_000859,NM_001130996,NM_001164443	chr5,chr5,chr5	+,+,-	HMGCR,HMGCR,ANKRD31	-19,-19,-99912
chr10:99207504-99208103	chr10	+	99207699	99208021	True	NM_016046,NM_032327,NM_198043,NM_198045,NM_198044,NM_198046	chr10,chr10,chr10,chr10,chr10,chr10	-,+,+,+,+,+	EXOSC1,ZDHHC16,ZDHHC16,ZDHHC16,ZDHHC16,ZDHHC16	-1931,-1820,-1820,-1820,-1820,-1803
chr9:66489252-66489684	chr9	+	66489416	66489732	True	NR_024443,NR_024496	chr9,chr9	-,+	LOC100133920,LOC442421	541300,4536
chr9:66489252-66489684	chr9	+	45352537	45352599	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-362352,-1721807
chr16:10971804-10972112	chr16	+	10971856	10972144	True	NM_000246,NM_001079512	chr16,chr16	+,-	CIITA,FAM18A	-855,-59235
chr22:36017484-36018610	chr22	+	36017483	36018141	True	NM_203377,NM_030641,NM_203378,NM_005368	chr22,chr22,chr22,chr22	-,+,-,-	MB,APOL6,MB,MB	1310,26282,-3928,-4099
chr10:120354015-120354329	chr10	+	120354115	120354345	True	NM_004248,NM_199461	chr10,chr10	-,+	PRLHR,NANOS1	865,434882
chr17:42222377-42223397	chr17	+	42222466	42223170	True	NM_001171251,NM_005474,NM_024032	chr17,chr17,chr17	+,-,+	C17orf53,HDAC5,C17orf53	-3243,-21452,-3243
chr15:90456447-90456973	chr15	+	90456546	90456906	True	NM_182616,NM_198526,NM_001199058	chr15,chr15,chr15	-,+,-	C15orf38,ZNF710,C15orf38-AP3S2	-324,87845,-324
chr1:18087875-18088359	chr1	+	18087952	18088408	True	NM_018715,NM_030812	chr1,chr1	-,+	RCC2,ACTL8	-321732,-6195
chr11:65379135-65380607	chr11	+	65379340	65380528	True	NM_032223,NM_002419	chr11,chr11	+,-	PCNXL3,MAP3K11	3254,1242
chr12:25401507-25402185	chr12	+	25401592	25402086	True	NM_001001660,NM_004985,NM_033360	chr12,chr12,chr12	+,-,-	LYRM5,KRAS,KRAS	-53494,1826,1826
chr20:57267028-57267425	chr20	+	57267067	57267419	True	NR_029844,NM_024663,NM_001204873,NM_001204872	chr20,chr20,chr20,chr20	-,+,+,+	MIR296,NPEPL1,NPEPL1,NPEPL1	125380,442,-2931,-2931
chr1:200002667-200003046	chr1	+	200002710	200003066	True	NM_205860,NM_012482,NM_003822	chr1,chr1,chr1	+,-,+	NR5A2,ZNF281,NR5A2	-5991,376150,-5991
chr16:69958228-69958813	chr16	+	69958351	69958783	True	NR_029681,NM_199424,NR_003610	chr16,chr16,chr16	+,+,-	MIR140,WWP2,PDXDC2P	8200,117,141118
chr16:31118025-31118536	chr16	+	31118202	31118450	True	NM_001122957,NM_206824,NM_005881	chr16,chr16,chr16	+,-,+	BCKDK,VKORC1,BCKDK	1211,-11926,1211
chr17:3793084-3793500	chr17	+	3793220	3793482	True	NM_172207,NM_172206,NM_032294,NM_031965	chr17,chr17,chr17,chr17	-,-,-,+	CAMKK1,CAMKK1,CAMKK1,GSG2	2905,605,2905,-166074
chr4:100237396-100239246	chr4	+	100237636	100239031	True	NM_032149,NM_000668	chr4,chr4	+,-	C4orf17,ADH1B	193129,3599
chr4:11371139-11372989	chr4	+	11371224	11373042	True	NR_030298,NM_005114	chr4,chr4	+,-	MIR572,HS3ST1	-824,57551
chr4:11371139-11372989	chr16	-	2316553	2316786	False	NR_037448,NM_080594,NM_006711,NR_030636	chr16,chr16,chr16,chr16	+,-,-,+	MIR3677,RNPS1,RNPS1,MIR940	3927,1678,1123,4961
chr1:244615389-244615754	chr1	+	244615413	244615772	True	NM_173807,NM_001126,NM_001130957	chr1,chr1,chr1	+,-,+	C1orf101,ADSS,C1orf101	8900,23,8900
chr1:19215006-19215365	chr1	+	19215041	19215403	True	NM_001161504,NM_001135254	chr1,chr1	-,+	ALDH4A1,PAX7	2032,-257592
chr17:40538124-40539700	chr17	+	40538443	40539717	True	NM_001130020,NM_213662,NM_003150,NM_139276	chr17,chr17,chr17,chr17	+,-,-,-	ATP6V0A1,STAT3,STAT3,STAT3	71144,740,848,848
chr5:135163923-135165887	chr5	+	135164059	135165784	True	NM_145282,NM_000590	chr5,chr5	+,-	SLC25A48,IL9	4580,65782
chr15:33357129-33357642	chr15	+	33357136	33357664	True	NM_001036,NM_001103184	chr15,chr15	+,-	RYR3,FMN1	245512,2479
chr15:81279281-81281263	chr15	+	81279742	81281268	True	NM_022566,NM_015154	chr15,chr15	+,-	MESDC1,MESDC2	12026,987
chr4:9498376-9499289	chr4	+	9498991	9499273	True	NR_031688,NM_001040448	chr4,chr4	-,+	MIR548I2,DEFB131	58714,-52782
chr4:9498376-9499289	chr4	-	4145619	4145669	False	NM_145291,NM_177998	chr4,chr4	+,-	ZBTB49,OTOP1	146254,83002
chr4:9498376-9499289	chr4	+	8965220	8965270	False	NM_018942,NM_001040071	chr4,chr4	-,+	HMX1,LOC650293	-91677,-13794
chr7:107643923-107644414	chr7	+	107643930	107644263	True	NM_002291,NM_000108	chr7,chr7	-,+	LAMB1,DLD	-126,-112395
chr12:52775174-52776744	chr12	+	52775258	52776598	True	NM_033045,NM_002284	chr12,chr12	-,+	KRT84,KRT86	2869,-79660
chr11:118875896-118877238	chr11	+	118876387	118876607	True	NM_198489,NR_003040	chr11,chr11	+,-	CCDC84,RPL23AP64	-7587,-2084
chr19:42814221-42814853	chr19	+	42814249	42814895	True	NM_199285,NM_173633,NM_002573,NM_001145939,NM_001145940	chr19,chr19,chr19,chr19,chr19	+,+,-,-,-	PRR19,TMEM145,PAFAH1B3,PAFAH1B3,PAFAH1B3	-8016,2581,-7453,-7320,-7297
chr3:128226393-128227403	chr3	+	128226540	128227225	True	NR_026954,NM_032638	chr3,chr3	+,-	LOC90246,GATA2	-85,-14510
chr3:183817476-183817676	chr3	+	183817581	183817645	True	NM_182589,NM_001023587	chr3,chr3	+,-	HTR3E,ABCC5	321,-81854
chr19:39341314-39341928	chr19	+	39341324	39341946	True	NM_001001716,NM_001533,NM_001005335	chr19,chr19,chr19	+,-,-	NFKBIB,HNRNPL,HNRNPL	48668,-707,1083
chr13:42498779-42500550	chr13	+	42498808	42500553	True	NM_015058,NM_001204504	chr13,chr13	-,+	KIAA0564,DGKH	34718,113618
chr1:187532965-187533896	chr1	+	187533102	187533844	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-883543,-735121
chr19:46525819-46526045	chr19	+	46525825	46526067	True	NR_030412,NM_005091	chr19,chr19	+,-	MIR769,PGLYRP1	-3686,539
chr1:39803734-39805585	chr1	+	39804013	39805570	True	NM_033044,NR_003929	chr1,chr1	+,-	MACF1,PPIEL	-7254,219851
chr11:129684056-129685113	chr11	+	129684099	129685091	True	NM_138788,NM_006165	chr11,chr11	+,-	TMEM45B,NFRKB	649,77863
chr7:42952332-42954107	chr7	+	42952354	42954132	True	NM_024054,NM_001099858,NM_031903	chr7,chr7,chr7	-,-,+	C7orf25,C7orf25,MRPL32	-665,-665,17806
chr6:41701500-41702028	chr6	+	41701535	41701891	True	NM_001167827,NM_007162,NM_013397	chr6,chr6,chr6	-,-,+	TFEB,TFEB,PRICKLE4	2156,957,46608
chr2:208891909-208892677	chr2	+	208892378	208892642	True	NM_001080475,NM_001178000	chr2,chr2	-,+	PLEKHM3,PIKFYVE	-2094,238348
chr6:16130149-16130471	chr6	+	16130163	16130509	True	NM_013262,NR_036448	chr6,chr6	+,-	MYLIP,DTNBP1	-897,-466874
chr4:169029355-169031081	chr4	+	169029657	169031064	True	NM_017631,NM_007193	chr4,chr4	-,+	DDX60,ANXA10	208958,-16020
chrY:26959579-26959850	chrY	+	26959742	26959890	True	NM_020364,NM_001005375,NM_020420	chrY,chrY,chrY	-,+,-	DAZ3,DAZ4,DAZ4	-103,20076,-103
chrY:26959579-26959850	chrY	-	26979715	26979863	False	NM_020364,NM_001005375,NM_001005785,NM_020420,NM_001005786	chrY,chrY,chrY,chrY,chrY	+,+,+,+,+	DAZ3,DAZ4,DAZ2,DAZ4,DAZ2	103,103,126,103,126
chrY:26959579-26959850	chrY	+	25345357	25345505	False	NM_020364,NM_001005375,NM_004081,NM_020420	chrY,chrY,chrY,chrY	+,-,-,-	DAZ3,DAZ4,DAZ1,DAZ4	20075,-103,-118,-103
chrY:26959579-26959850	chrY	-	25365329	25365477	False	NM_020364,NM_020420,NM_001005786,NM_001005785,NM_020363	chrY,chrY,chrY,chrY,chrY	+,+,+,+,+	DAZ3,DAZ4,DAZ2,DAZ2,DAZ2	103,103,126,126,126
chr7:45194527-45194782	chr7	+	45194616	45194754	True	NM_199122,NM_005856	chr7,chr7	-,+	TBRG4,RAMP3	-43299,2612
chr17:56829960-56831556	chr17	+	56830372	56831375	True	NM_014906,NM_198393	chr17,chr17	+,-	PPM1E,TEX14	1856,-60956
chr19:19778146-19778584	chr19	+	19778380	19778608	True	NM_020410,NM_033204	chr19,chr19	-,+	ATP13A1,ZNF101	-3877,1054
chr10:101189098-101189636	chr10	+	101189133	101189572	True	NM_002079,NM_020348	chr10,chr10	-,+	GOT1,CNNM1	1009,-100335
chr6:28297283-28298705	chr6	+	28297324	28298754	True	NM_024493,NR_024164,NR_024165,NM_030899,NM_001135216	chr6,chr6,chr6,chr6,chr6	+,-,-,-,-	ZKSCAN3,ZNF323,ZNF323,ZNF323,ZNF323	18936,5215,5456,5456,5215
chr1:242013505-242014295	chr1	+	242013758	242014074	True	NM_006027,NM_001004343,NM_130398,NM_003686	chr1,chr1,chr1,chr1	+,-,+,+	EXO1,MAP1LC3C,EXO1,EXO1	-1776,148367,-2316,-1776
chr7:97912514-97912895	chr7	+	97912525	97912843	True	NM_001159491,NM_015395,NM_015379	chr7,chr7,chr7	+,-,+	BRI3,TECPR1,BRI3	-1597,-31057,-1597
chr17:7321747-7322050	chr17	+	7321821	7322021	True	NM_152766,NM_199339,NM_175734	chr17,chr17,chr17	-,+,+	C17orf61,SPEM1,C17orf74	-14371,1657,6913
chr8:41906786-41908410	chr8	+	41907070	41908451	True	NM_001134296,NM_001099412,NM_001099413,NM_006766	chr8,chr8,chr8,chr8	+,-,-,-	AP3M2,MYST3,MYST3,MYST3	102012,1104,1104,1104
chr11:69187838-69189178	chr11	+	69187873	69189118	True	NM_153451,NM_138768	chr11,chr11	-,+	ORAOV1,MYEOV	301097,-126302
chr1:111489572-111490687	chr1	+	111489739	111490715	True	NM_000560,NM_001006945	chr1,chr1	+,-	CD53,C1orf103	-74072,15907
chr12:6494454-6494792	chr12	+	6494459	6494783	True	NM_002342,NM_001159575,NM_001038	chr12,chr12,chr12	+,-,-	LTBR,SCNN1A,SCNN1A	-1153,-7936,-9554
chr7:127234192-127235515	chr7	+	127234335	127235548	True	NM_024523,NM_020369,NM_001662	chr7,chr7,chr7	-,+,+	GCC1,FSCN3,ARF5	-8681,-697,-5980
chr13:21139493-21140223	chr13	+	21139747	21140049	True	NM_175605,NM_006531,NM_015974	chr13,chr13,chr13	+,+,-	IFT88,IFT88,CRYL1	1158,1158,-39735
chr2:241497767-241498159	chr2	+	241497787	241498105	True	NM_001033575,NM_017844,NM_016552,NM_018226	chr2,chr2,chr2,chr2	+,-,-,+	DUSP28,ANKMY1,ANKMY1,RNPEPL1	1365,-382,-382,9898
chr9:130741218-130741870	chr9	+	130741454	130741744	True	NM_001035254,NM_001006641	chr9,chr9	-,+	FAM102A,SLC25A25	1118,88734
chr11:62186619-62187876	chr11	+	62186811	62187640	True	NM_003357,NM_206998	chr11,chr11	+,-	SCGB1A1,SCGB1D4	-355,-120275
chr6:44183486-44184702	chr6	+	44183666	44184727	True	NM_004955,NM_178148,NM_001078174,NM_001078175,NM_001078176,NM_001078177	chr6,chr6,chr6,chr6,chr6,chr6	+,-,+,+,+,+	SLC29A1,SLC35B2,SLC29A1,SLC29A1,SLC29A1,SLC29A1	2514,40606,2514,6568,6568,6635
chr9:34988405-34988962	chr9	+	34988513	34988895	True	NM_001135004,NM_001135005,NM_012266,NM_007126	chr9,chr9,chr9,chr9	+,+,+,-	DNAJB5,DNAJB5,DNAJB5,VCP	829,1371,829,83894
chr5:140684132-140684511	chr5	+	140684131	140684211	True	NM_031947,NM_031993	chr5,chr5	-,+	SLC25A2,PCDHGA1	-519,26040
chr1:33117137-33117748	chr1	+	33117398	33117778	True	NM_001135255,NM_001135256,NM_005610,NM_178547	chr1,chr1,chr1,chr1	+,+,+,-	RBBP4,RBBP4,RBBP4,ZBTB8OS	-700,-490,-700,-1213
chr13:113300656-113301391	chr13	+	113300891	113301435	True	NM_207440,NM_006322	chr13,chr13	+,-	C13orf35,TUBGCP3	29,-58410
chr12:117318372-117318713	chr12	+	117318376	117318570	True	NM_003806,NM_012174	chr12,chr12	-,+	HRK,FBXW8	712,30190
chr2:131486988-131487354	chr2	+	131486992	131487398	True	NM_207364,NM_001079530	chr2,chr2	+,-	GPR148,CFC1B	-400,-129741
chr8:120865333-120866987	chr8	+	120865416	120867018	True	NM_024094,NM_022783	chr8,chr8	-,+	DSCC1,DEPTOR	1202,18881
chr11:4935978-4936757	chr11	+	4935984	4936787	True	NM_001005238,NM_001005237,NM_001004749	chr11,chr11,chr11	-,-,+	OR51G2,OR51G1,OR51A7	157,8833,-7435
chr9:46292712-46292916	chr20	+	25990707	25991203	True	NR_004846,NR_003678	chr20,chr20	+,-	LOC100134868,C20orf191	-769,103970
chr9:46292712-46292916	chr9	+	46292883	46292965	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2662153,394600
chr9:46292712-46292916	chr9	+	67701807	67701859	False	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	92380,224901
chr1:159778650-159778932	chr1	+	159778848	159778976	True	NM_001134233,NM_001004310	chr1,chr1	-,+	C1orf204,FCRL6	46211,-6726
chr19:41104391-41104710	chr19	+	41104432	41104710	True	NM_001042544,NM_001042545,NM_004756,NM_003573	chr19,chr19,chr19,chr19	+,+,-,+	LTBP4,LTBP4,NUMBL,LTBP4	-1342,2566,91896,-5411
chr17:654330-654797	chr17	+	654338	654834	True	NM_015721,NR_024120	chr17,chr17	-,+	GEMIN4,DBIL5P	717,1065
chr3:179368105-179368495	chr3	+	179368419	179368491	True	NM_177988,NM_003940	chr3,chr3	-,+	MRPL47,USP13	-45985,2441
chr19:52269331-52269977	chr19	+	52269459	52269945	True	NM_002029,NM_001462,NM_001005738	chr19,chr19,chr19	-,+,+	FPR1,FPR2,FPR2	-14309,-2868,-5057
chr17:45607461-45607813	chr17	+	45607594	45607717	True	NR_033934,NM_006310	chr17,chr17	-,+	MRPL45P2,NPEPPS	-37608,726
chr17:45607461-45607813	chr17	-	36414175	36414228	False	NR_036750,NM_032351	chr17,chr17	-,+	LOC440434,MRPL45	-919,38769
chr7:130336649-130338183	chr7	+	130337049	130338082	True	NM_012133,NR_029899	chr7,chr7	-,+	COPG2,MIR335	15577,-201149
chr12:66695841-66696281	chr12	+	66695863	66696329	True	NM_016056,NM_033647	chr12,chr12	-,+	TMBIM4,HELB	-132056,26
chr7:102037147-102037896	chr7	+	102037152	102037911	True	NM_024653,NM_001146210	chr7,chr7	+,-	PRKRIP1,SPDYE6	-399,-40263
chr1:38413036-38413366	chr1	+	38413074	38413380	True	NM_005540,NM_016037	chr1,chr1	-,+	INPP5B,UTP11L	-345,65003
chr2:78181588-78182127	chr2	+	78181597	78182160	True	NR_024342,NM_198448	chr2,chr2	-,+	SNAR-H,REG3G	42,1070665
chr19:4471014-4471277	chr19	+	4471251	4471325	True	NM_025241,NM_032631,NM_001001520	chr19,chr19,chr19	-,+,+	UBXN6,HDGFRP2,HDGFRP2	-13460,929,929
chr1:14690642-14691531	chr1	+	14690650	14691268	True	NM_015209,NR_027136	chr1,chr1	+,-	KAZN,C1orf126	233944,787742
chr1:20208116-20208618	chr1	+	20208298	20208650	True	NM_015207,NM_014589	chr1,chr1	+,-	OTUD3,PLA2G2E	237,41510
chr2:239196168-239196592	chr2	+	239196206	239196570	True	NM_001139490,NM_022817	chr2,chr2	+,-	TRAF3IP1,PER2	32614,687
chr8:33327604-33328467	chr8	+	33327965	33328473	True	NM_032509,NM_032664	chr8,chr8	+,-	MAK16,FUT10	14211,2251
chr2:45838563-45838860	chr2	+	45838674	45838884	True	NM_018079,NM_005400	chr2,chr2	-,+	SRBD1,PRKCE	-241,40158
chr9:14673598-14674326	chr9	+	14673627	14674371	True	NR_003920,NM_178566	chr9,chr9	+,-	LOC389705,ZDHHC21	318953,19159
chr21:43136893-43137701	chr21	+	43136976	43137691	True	NR_027272,NR_024028	chr21,chr21	-,+	C21orf129,NCRNA00112	-1041,-432
chr9:44758068-44758429	chr9	+	44758095	44758315	True	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	231920,-1127365
chr9:44758068-44758429	chr9	+	67679475	67679545	False	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	114698,247215
chr10:94636677-94637815	chr10	+	94636804	94637839	True	NM_004969,NM_019053	chr10,chr10	-,+	IDE,EXOC6	-302952,-28630
chr16:30455803-30456330	chr16	+	30455828	30456377	True	NM_001114380,NM_012248	chr16,chr16	+,-	ITGAL,SEPHS2	27605,897
chr2:32266481-32267986	chr2	+	32266678	32267761	True	NM_032574,NM_014946	chr2,chr2	-,+	DPY30,SPAST	-1834,20918
chr2:179337497-179338914	chr2	+	179337750	179338951	True	NM_019091,NM_001135212,NM_181342	chr2,chr2,chr2	+,-,-	PLEKHA3,FKBP7,FKBP7	6247,4455,4455
chr12:100752639-100753106	chr12	+	100752934	100753159	True	NM_001145288,NM_152317,NM_139319	chr12,chr12,chr12	+,-,+	SLC17A8,DEPDC4,SLC17A8	-2134,-92077,-2134
chr3:52830387-52830846	chr3	+	52830491	52830883	True	NM_003157,NM_002217	chr3,chr3	-,+	NEK4,ITIH3	-25526,-1758
chr12:52248396-52249744	chr12	+	52249031	52249683	True	NM_001130015,NM_001013690	chr12,chr12	+,-	ANKRD33,FIGNL2	32109,-23330
chr20:2780112-2780430	chr20	+	2780159	2780411	True	NM_080739,NM_001184699,NM_019609	chr20,chr20,chr20	+,-,-	C20orf141,CPXM1,CPXM1	15245,931,931
chr19:39936410-39936653	chr19	+	39936508	39936598	True	NM_001111020,NM_001130825,NM_003169,NM_001130824,NM_001020	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	SUPT5H,SUPT5H,SUPT5H,SUPT5H,RPS16	-373,-373,-271,-373,-9890
chr9:27284723-27285433	chr9	+	27284728	27284934	True	NR_026679,NR_026687,NM_000459	chr9,chr9,chr9	-,-,+	NCRNA00032,NCRNA00032,TEK	-1937,-1937,-175646
chr20:35968923-35969285	chr20	+	35968956	35969326	True	NM_198291,NM_021081,NM_005417	chr20,chr20,chr20	+,-,+	SRC,GHRH,SRC	5230,-83657,3761
chr1:183276087-183276347	chr1	+	183276096	183276395	True	NM_170706,NM_005562	chr1,chr1	-,+	NMNAT2,LAMC2	-2087,-120973
chr13:19913283-19914642	chr13	+	19913301	19914545	True	NR_034026,NR_027248	chr13,chr13	+,-	LOC100287114,ANKRD26P3	4643,4618
chr1:38156466-38157144	chr1	+	38156465	38157139	True	NM_017850,NM_018101	chr1,chr1	-,+	C1orf109,CDCA8	-273,1019
chr12:58334945-58335152	chr12	+	58334963	58335185	True	NM_005730,NM_033276	chr12,chr12	-,+	CTDSP2,XRCC6BP1	-94216,259
chr6:2987706-2988035	chr6	+	2987713	2987843	True	NR_026855,NR_026856,NM_004568	chr6,chr6,chr6	+,+,-	DKFZP686I15217,DKFZP686I15217,SERPINB6	357,357,-15314
chr21:36056622-36057859	chr21	+	36056856	36057906	True	NM_004414,NM_053277	chr21,chr21	-,+	RCAN1,CLIC6	-69474,-15232
chr18:29597952-29598736	chr18	+	29598172	29598566	True	NM_014939,NM_017831	chr18,chr18	-,+	TRAPPC8,RNF125	-75081,-12
chr12:52714564-52714901	chr12	+	52714576	52714766	True	NM_002284,NM_002282	chr12,chr12	+,-	KRT86,KRT83	-18978,466
chr19:42028681-42029127	chr19	+	42028857	42029058	True	NM_001098506,NR_030765	chr19,chr19	+,-	CEACAM21,ATP5SL	53472,-83014
chr1:167207284-167207543	chr1	+	167207307	167207501	True	NR_037163,NM_005814	chr1,chr1	+,-	POU2F1,GPA33	-17245,-147439
chr3:149099572-149100231	chr3	+	149099604	149100280	True	NM_004617,NM_014220	chr3,chr3	+,-	TM4SF4,TM4SF1	92087,-4036
chr10:112639333-112641020	chr10	+	112639441	112641044	True	NM_014456,NR_026932,NM_145341,NM_001199492	chr10,chr10,chr10,chr10	+,-,+,+	PDCD4,LOC282997,PDCD4,PDCD4	-7947,-8779,-7947,-7947
chr18:32624285-32625917	chr18	+	32624823	32625898	True	NM_001112734,NM_014268,NR_026570	chr18,chr18,chr18	-,+,+	ZSCAN30,MAPRE2,MAPRE2	244355,-3558,-3558
chr12:6617216-6618721	chr12	+	6617535	6618765	True	NM_016497,NR_004387	chr12,chr12	-,+	MRPL51,SCARNA10	-15064,622
chr1:204462421-204462917	chr1	+	204462515	204462889	True	NM_001204171,NM_002646	chr1,chr1	+,-	MDM4,PIK3C2B	22617,-3041
chr6:31371530-31371782	chr6_qbl_hap6	+	2665033	2665215	False	NM_001177519,NM_000247,NR_036523,NR_036524,NM_005514	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	+,+,+,+,-	MICA,MICA,MICA,MICA,HLA-B	-267,-267,-4077,-3165,-46528
chr6:31371530-31371782	chr6	+	31371587	31371769	True	NM_001177519,NM_000247,NR_036523,NR_036524,NM_005514	chr6,chr6,chr6,chr6,chr6	+,+,+,+,-	MICA,MICA,MICA,MICA,HLA-B	-267,-267,-4077,-3165,-46598
chr6:31371530-31371782	chr6_mann_hap4	+	2718021	2718203	False	NM_001177519,NM_000247,NR_036523,NR_036524,NM_005514	chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4	+,+,+,+,-	MICA,MICA,MICA,MICA,HLA-B	-267,-267,-4075,-3163,-46577
chr6:31371530-31371782	chr6_ssto_hap7	+	2705384	2705566	False	NM_001177519,NM_000247,NR_036523,NR_036524,NM_005514	chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7	+,+,+,+,-	MICA,MICA,MICA,MICA,HLA-B	-267,-267,-4076,-3164,-46636
chr6:31371530-31371782	chr6_cox_hap2	+	2884286	2884468	False	NM_001177519,NM_000247,NR_036523,NR_036524,NM_005514	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,+,+,+,-	MICA,MICA,MICA,MICA,HLA-B	-267,-267,-4080,-3168,-46609
chr17:37766945-37767492	chr17	+	37767032	37767539	True	NM_032192,NM_006160	chr17,chr17	+,-	PPP1R1B,NEUROD2	15639,-2857
chr16:285631-285872	chr16	+	285634	285803	True	NM_201412,NM_018032,NM_032039	chr16,chr16,chr16	-,-,+	LUC7L,LUC7L,ITFG3	-6185,-6185,-885
chr13:21631124-21631675	chr13	+	21631147	21631566	True	NM_014572,NM_005870	chr13,chr13	-,+	LATS2,SAP18	4213,83086
chr18:56528685-56530509	chr18	+	56528735	56530209	True	NM_018181,NM_052947	chr18,chr18	+,-	ZNF532,ALPK2	-149,-232546
chr10:22606090-22606413	chr10	+	22606089	22606447	True	NM_001204062,NM_001199938,NM_012071,NM_005180	chr10,chr10,chr10,chr10	+,-,+,+	COMMD3-BMI1,EBLN1,COMMD3,BMI1	-828,-107177,-828,3691
chr19:48220220-48220599	chr19	+	48220219	48220311	True	NM_014601,NM_198479	chr19,chr19	+,-	EHD2,TPRX1	-3669,86600
chr17:42084407-42084693	chr17	+	42084412	42084742	True	NM_004160,NM_032376,NM_153006	chr17,chr17,chr17	-,-,+	PYY,TMEM101,NAGS	-2575,7653,-2431
chr21:33032869-33033799	chr21	+	33032963	33033548	True	NM_000454,NM_001145444	chr21,chr21	+,-	SOD1,SCAF4	-1080,70946
chr7:35295218-35296029	chr7	+	35295311	35296045	True	NM_001166220,NM_001077653,NM_001011553	chr7,chr7,chr7	-,-,+	TBX20,TBX20,SEPT7	-1600,-1600,544581
chr22:16290181-16290638	chr22	+	16290276	16290674	True	NR_001591,NM_001136213	chr22,chr22	+,-	psiTPTE22,POTEH	792126,-2339
chr22:16290181-16290638	chr14	+	20022571	20022747	False	NM_001145442,NM_172194	chr14,chr14	-,+	POTEM,OR4Q3	-2299,192839
chr22:16290181-16290638	chr14	-	19550657	19551055	False	NM_001145442,NR_027480,NM_001005356	chr14,chr14,chr14	-,+,+	POTEM,POTEG,POTEG	469267,2309,2309
chr13:52582516-52584398	chr13	+	52582811	52584435	True	NM_001005918,NM_000053,NR_036571,NM_001004127	chr13,chr13,chr13,chr13	-,-,+,+	ATP7B,ATP7B,ALG11,ALG11	1245,1245,2087,2087
chr1:36026656-36028231	chr1	+	36026783	36028279	True	NM_014284,NM_001014839,NM_001014841,NM_024874	chr1,chr1,chr1,chr1	+,+,+,-	NCDN,NCDN,NCDN,KIAA0319L	-3441,-3441,-3441,-3746
chr16:87738890-87739333	chr16	+	87738944	87739374	True	NM_020655,NM_001184854	chr16,chr16	+,-	JPH3,KLHDC4	-102496,60274
chrX:49462238-49463094	chrX	+	49462351	49462737	True	NM_003785,NM_001468	chrX,chrX	-,+	PAGE1,GAGE1	-1755,-98793
chr17:75086296-75087328	chr17	+	75086391	75087152	True	NM_001204408,NR_036200,NR_027058,NM_001204410,NR_003013	chr17,chr17,chr17,chr17,chr17	+,-,+,+,+	SEC14L1,MIR4316,C17orf86,SEC14L1,SCARNA16	-1725,306034,-1725,-1215,-1061
chr10:99251143-99251617	chr10	+	99251484	99251626	True	NM_022362,NM_024954	chr10,chr10	-,+	MMS19,UBTD1	6798,7141
chr22:24093722-24093928	chr22	+	24093819	24093943	True	NM_013378,NM_021916,NM_182520	chr22,chr22,chr22	-,-,+	VPREB3,ZNF70,C22orf15	2737,-540,11264
chr1:2003406-2003683	chr1	+	2003435	2003586	True	NM_001080484,NM_001033581	chr1,chr1	-,+	KIAA1751,PRKCZ	-68159,1499
chr8:21648060-21648363	chr8	+	21648069	21648402	True	NM_001495,NM_001165038,NM_001165039,NM_015024	chr8,chr8,chr8,chr8	-,-,-,+	GFRA2,GFRA2,GFRA2,XPO7	-1723,-1723,-1723,128777
chr6:64019191-64021098	chr6	+	64019740	64021033	True	NM_001143940,NM_016571,NM_003463	chr6,chr6,chr6	-,-,+	LGSN,LGSN,PTP4A1	8902,8902,260886
chr7:44611161-44611944	chr7	+	44611206	44611994	True	NM_182547,NM_001003941,NM_019082	chr7,chr7,chr7	-,+,-	TMED4,OGDH,DDX56	9885,34126,2195
chr15:34396396-34398353	chr15	+	34396398	34398262	True	NM_152595,NM_020154	chr15,chr15	+,-	PGBD4,C15orf24	-2175,-2345
chr1:206950176-206950932	chr1	+	206950765	206950981	True	NM_153758,NM_000572	chr1,chr1	+,-	IL19,IL10	21233,-4926
chr17:36983632-36984151	chr17	+	36983821	36983891	True	NM_017748,NM_006148	chr17,chr17	-,+	CWC25,LASP1	-2232,42220
chr15:52476247-52477504	chr15	+	52476280	52477381	True	NM_006578,NM_016194,NM_002748	chr15,chr15,chr15	-,-,+	GNB5,GNB5,MAPK6	-4118,6234,-164920
chr9:136215812-136216839	chr9	+	136215890	136216758	True	NM_133640,NM_000972,NM_181491,NR_000017,NR_002447,NM_003172,NM_017503,NR_002448,NR_000016	chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,+,-,+,+,-,+,+,+	MED22,RPL7A,MED22,SNORD36B,SNORD24,SURF1,SURF2,SNORD36A,SNORD36C	-918,-876,-918,190,74,6659,6662,552,942
chr6:14824895-14826258	chr6	+	14825167	14826160	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	420366,837179
chr9:110253910-110254768	chr9	+	110253936	110254780	True	NM_004235,NM_002874	chr9,chr9	-,+	KLF4,RAD23B	-1889,-208444
chr20:52198162-52199098	chr20	+	52198363	52199081	True	NM_006526,NM_001193421	chr20,chr20	-,+	ZNF217,TSHZ2	605,-396592
chr15:22888552-22890232	chr15	+	22888856	22890063	True	NM_014608,NM_001008860	chr15,chr15	+,-	CYFIP1,NIPA2	2620,144427
chr15:28983438-28983831	chr15	+	28983672	28983733	True	NR_033351,NR_026589	chr15,chr15	-,+	GOLGA8F,WHAMML2	-205529,-1002
chr3:15011041-15011769	chr3	+	15011117	15011670	True	NM_022497,NM_003298	chr3,chr3	-,+	MRPS25,NR2C2	95197,-21946
chr13:77166744-77167442	chr13	+	77166746	77167362	True	NR_026983,NM_138444	chr13,chr13	+,-	BTF3P11,KCTD12	335222,293241
chr14:20928923-20929272	chr14	+	20929048	20929150	True	NM_001641,NM_000270,NM_017807,NM_001100814,NM_080649,NM_080648,NM_144568	chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,+,-,-,+,+,-	APEX1,PNP,OSGEP,TMEM55B,APEX1,APEX1,TMEM55B	-5809,8387,-5781,537,-5809,-5809,537
chr17:75445370-75446104	chr17	+	75445386	75446040	True	NM_001113496,NR_036200	chr17,chr17	+,-	SEPT9,MIR4316	572,-52250
chr19:7896930-7897187	chr19	+	7896934	7897172	True	NM_145245,NM_001190467	chr19,chr19	+,-	EVI5L,FLJ22184	-1824,42204
chr3:23959238-23959478	chr3	+	23959262	23959374	True	NM_002948,NM_020345	chr3,chr3	+,-	RPL15,NKIRAS1	-681,-725
chr9:139705924-139706731	chr9	+	139706374	139706730	True	NM_024718,NM_001173989,NM_001173988,NR_024580	chr9,chr9,chr9,chr9	+,+,+,-	C9orf86,C9orf86,C9orf86,LOC100131193	-4051,-4051,-4051,-3074
chr1:167058493-167059334	chr1	+	167058497	167059355	True	NM_005814,NM_001080426	chr1,chr1	-,+	GPA33,DUSP27	563,4731
chr5:55412923-55413439	chr5	+	55412922	55413230	True	NM_024669,NM_139017	chr5,chr5	-,+	ANKRD55,IL31RA	116013,-265640
chr3:132440055-132440444	chr3	+	132440090	132440480	True	NR_002811,NR_037804,NM_153240	chr3,chr3,chr3	+,-,-	NCRNA00119,NPHP3-ACAD11,NPHP3	705,873,873
chr19:6423720-6424128	chr19	+	6423787	6423929	True	NR_037505,NM_139161,NM_003685,NM_173637	chr19,chr19,chr19,chr19	-,+,-,-	MIR3940,CRB3,KHSRP,SLC25A41	-7265,40330,943,9911
chr7:100772226-100772792	chr7	+	100772516	100772600	True	NM_003378,NM_001165413,NM_000602	chr7,chr7,chr7	-,+,+	VGF,SERPINE1,SERPINE1	36312,-2197,-2197
chrX:129245252-129246154	chrX	+	129245347	129246137	True	NM_001127197,NM_001421,NM_004794	chrX,chrX,chrX	-,-,+	ELF4,ELF4,RAB33A	-659,-872,59635
chr16:69141832-69142060	chr16	+	69141834	69141988	True	NM_138612,NM_001199280,NM_005329,NM_001040146	chr16,chr16,chr16,chr16	+,+,+,-	HAS3,HAS3,HAS3,CHTF8	-1756,-2418,-442,24124
chr12:12765292-12765896	chr12	+	12765324	12765732	True	NM_001310,NM_030640	chr12,chr12	+,-	CREBL2,DUSP16	-544,-49876
chr5:119800387-119800676	chr5	+	119800405	119800702	True	NM_173666,NM_016644	chr5,chr5	-,+	DTWD2,PRR16	-1476165,-437
chr17:39993697-39994672	chr17	+	39993739	39994403	True	NM_052935,NR_033464,NR_033465,NM_152467	chr17,chr17,chr17,chr17	-,-,-,+	NT5C3L,NT5C3L,NT5C3L,KLHL10	-1216,-1251,-1216,-52
chr19:38080688-38082536	chr19	+	38080807	38082388	True	NM_001172225,NM_001172226,NM_016536	chr19,chr19,chr19	+,+,-	ZNF540,ZNF540,ZNF571	3342,3342,3335
chr5:125940648-125941296	chr5	+	125941003	125941092	True	NM_001201377,NM_032177,NM_001202404,NM_001182	chr5,chr5,chr5,chr5	-,+,-,-	ALDH7A1,PHAX,ALDH7A1,ALDH7A1	-9921,-4449,-9921,-9921
chr12:49214889-49216249	chr12	+	49215364	49216200	True	NM_004818,NM_000725	chr12,chr12	-,+	DDX23,CACNB3	29807,-2903
chr10:97475752-97477607	chr10	+	97476008	97476995	True	NM_001143973,NM_001098175	chr10,chr10	-,+	TCTN3,ENTPD1	-22108,-4530
chr11:59431727-59433125	chr11	+	59431799	59432961	True	NM_152716,NM_001178040	chr11,chr11	-,+	PATL1,STX3	3600,89570
chr19:36236203-36236452	chr19	+	36236234	36236404	True	NM_024660,NM_144987,NM_172341,NM_001040425,NM_019104	chr19,chr19,chr19,chr19,chr19	-,-,+,-,+	IGFLR1,U2AF1L4,PSENEN,U2AF1L4,LIN37	-2883,-18,89,-18,3107
chr20:44601182-44601520	chr20	+	44601204	44601446	True	NM_004994,NM_022095	chr20,chr20	+,-	MMP9,ZNF335	36100,-371
chr12:58151351-58152914	chr12	+	58151701	58152601	True	NM_000785,NM_138396,NM_000075	chr12,chr12,chr12	-,+,-	CYP27B1,MARCH9,CDK4	8425,-2865,-5537
chr5:132083888-132085242	chr5	+	132084032	132085227	True	NM_007054,NM_001039780	chr5,chr5	-,+	KIF3A,CCNI2	-10767,-946
chr3:119331426-119332455	chr3	+	119331646	119332456	True	NM_015900,NM_022135	chr3,chr3	+,-	PLA1A,POPDC2	-14975,46998
chr10:8095753-8096298	chr10	+	8095771	8096339	True	NR_024255,NR_024256,NM_002051,NM_001002295	chr10,chr10,chr10,chr10	-,-,+,+	FLJ45983,FLJ45983,GATA3,GATA3	-324,-324,327,327
chr19:18506103-18507101	chr19	+	18506194	18507004	True	NM_145256,NM_004864,NR_036156	chr19,chr19,chr19	-,+,+	LRRC25,GDF15,MIR3189	1461,-9282,-8878
chr1:212456898-212457761	chr1	+	212457170	212457798	True	NM_006243,NM_001198862	chr1,chr1	+,-	PPP2R5A,TMEM206	1080,130495
chr19:39882137-39882519	chr19	+	39882207	39882395	True	NM_019088,NM_017592	chr19,chr19	-,+	PAF1,MED29	-528,-295
chr19:20189647-20190646	chr19	+	20189999	20190568	True	NM_033196,NM_007138	chr19,chr19	-,+	ZNF682,ZNF90	-39722,-1253
chr16:69388204-69388482	chr16	+	69388208	69388394	True	NM_016101,NM_144676	chr16,chr16	+,-	NIP7,TMED6	-14844,-2496
chr5:137075685-137076573	chr5	+	137075788	137076309	True	NM_017415,NR_002713	chr5,chr5	-,+	KLHL3,NPY6R	-4009,60572
chr19:38794747-38794961	chr19	+	38794862	38794926	True	NM_033557,NM_033520	chr19,chr19	-,+	YIF1B,C19orf33	5633,-109
chr12:67659199-67660401	chr12	+	67659461	67660335	True	NM_021150,NM_018448	chr12,chr12	-,+	GRIP1,CAND1	-586536,2725
chr9:134613981-134614317	chr9	+	134613999	134614279	True	NM_007171,NM_005312	chr9,chr9	+,-	POMT1,RAPGEF1	-235767,-1074
chr16:68677264-68677862	chr16	+	68677355	68677422	True	NM_018667,NM_001793	chr16,chr16	-,+	SMPD3,CDH3	-194946,728
chr20:3048296-3048806	chr20	+	3048542	3048832	True	NM_000490,NM_000915	chr20,chr20	-,+	AVP,OXT	16588,3433
chr12:13530169-13530508	chr12	+	13530233	13530435	True	NR_036555,NM_001423	chr12,chr12	-,+	C12orf36,EMP1	-554,-180682
chr2:31633728-31635334	chr2	+	31634525	31635255	True	NM_014600,NM_000379	chr2,chr2	+,-	EHD3,XDH	-177696,2408
chr10:32733940-32734939	chr10	+	32734189	32734949	True	NM_025209,NM_145023,NM_001026383	chr10,chr10,chr10	-,+,+	EPC1,CCDC7,CCDC7	-98076,91,91
chr12:7918088-7918923	chr12	+	7918291	7918753	True	NM_203503,NM_001145465	chr12,chr12	-,+	CLEC4C,NANOGNB	-16222,-530
chr2:85805167-85805636	chr2	+	85805192	85805620	True	NM_003761,NM_001142269,NM_006634	chr2,chr2,chr2	+,-,+	VAMP8,GGCX,VAMP5	-629,-16535,5910
chr2:161348607-161349260	chr2	+	161348637	161349243	True	NM_002897,NM_133484,NM_016836	chr2,chr2,chr2	-,+,-	RBMS1,TANK,RBMS1	1125,644222,1125
chrY:20744091-20746033	chrY	+	20744186	20746014	True	NR_001530,NR_002159,NR_003510	chrY,chrY,chrY	-,-,+	TTTY9A,TTTY9B,HSFY1	6444,6444,-35660
chrY:20744091-20746033	chrY	-	20898160	20899988	False	NR_001530,NM_001001877,NR_002159	chrY,chrY,chrY	+,-,+	TTTY9A,HSFY2,TTTY9B	-6444,35663,-6444
chr14:88846422-88848185	chr14	+	88846708	88847856	True	NM_021161,NM_001040428,NM_018418	chr14,chr14,chr14	-,+,+	KCNK10,SPATA7,SPATA7	-53452,4131,4131
chr17:7220095-7221147	chr17	+	7220273	7221147	True	NM_001970,NM_001143761,NM_004489,NM_001143762	chr17,chr17,chr17,chr17	+,+,-,+	EIF5A,EIF5A,GPS2,EIF5A	-9476,-9044,-1615,-8638
chr15:63795759-63796299	chr15	+	63795823	63796251	True	NR_034080,NM_006537	chr15,chr15	-,+	LOC100130855,USP3	96825,558
chrX:151994120-151995086	chrX	+	151994474	151994821	True	NM_015922,NM_004344,NM_001129765	chrX,chrX,chrX	+,-,+	NSDHL,CETN2,NSDHL	4689,4531,4689
chr22:42914548-42914836	chr22	+	42914615	42914867	True	NR_027786,NM_015703	chr22,chr22	+,-	SERHL,RRP7A	-18081,1012
chr22:42914548-42914836	chr22	+	42976827	42977014	False	NR_002184,NM_014509	chr22,chr22	-,+	RRP7B,SERHL2	1054,-26953
chr2:113885521-113886500	chr2	+	113885567	113886433	True	NM_173842,NM_173178	chr2,chr2	+,-	IL1RN,IL1F8	-480,-75127
chr8:121138212-121138424	chr8	+	121138259	121138345	True	NM_024094,NM_021110	chr8,chr8	-,+	DSCC1,COL14A1	-270089,-958
chr3:140973048-140974364	chr3	+	140973070	140974286	True	NM_001178140,NM_152282	chr3,chr3	-,+	TFDP2,ACPL2	744993,-22445
chr18:61087992-61088616	chr18	+	61088401	61088627	True	NM_004869,NM_002639	chr18,chr18	-,+	VPS4B,SERPINB5	1175,55516
chr22:17489393-17489642	chr22	+	17489479	17489607	True	NR_015352,NM_001037814	chr22,chr22	+,-	CECR7,GAB4	27852,-367
chrX:100333606-100334439	chrX	+	100333706	100334470	True	NM_021637,NM_024917	chrX,chrX	+,-	TMEM35,TRMT2B	1,-26601
chrY:24443528-24443772	chrY	+	24443531	24443705	True	NR_001541,NR_002193	chrY,chrY	-,+	TTTY5,RBMY2FP	1368,11300
chr3:98619525-98619845	chr3	+	98619524	98619788	True	NM_006100,NM_080927	chr3,chr3	+,-	ST3GAL6,DCBLD2	-168004,795
chr7:144051840-144052095	chr7	+	144051961	144052137	True	NM_005435,NM_001080413	chr7,chr7	+,-	ARHGEF5,NOBOX	351,48699
chr7:144051840-144052095	chr7	-	143893087	143893263	False	NM_001003702,NM_198495	chr7,chr7	-,+	ARHGEF35,CTAGE4	-296,-12590
chr7:144051840-144052095	chr7	-	143991667	143991843	False	NR_002158,NR_033942,NR_002157	chr7,chr7,chr7	+,-,+	OR2A20P,LOC728377,OR2A9P	4622,-8571,4770
chr12:120637987-120638439	chr12	+	120638303	120638469	True	NM_053275,NM_012240,NM_006836,NM_001002	chr12,chr12,chr12,chr12	-,+,-,-	RPLP0,SIRT4,GCN1L1,RPLP0	595,101654,-5790,595
chr17:77032678-77033504	chr17	+	77032718	77033156	True	NM_138793,NM_198593	chr17,chr17	-,+	CANT1,C1QTNF1	-26819,-2307
chr12:1099229-1099556	chr12	+	1099272	1099595	True	NM_134424,NR_027946,NM_178039,NR_027948,NR_027949,NM_178040	chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,+,+,+	RAD52,ERC1,ERC1,ERC1,ERC1,ERC1	-40409,808,808,808,808,808
chr19:58862403-58862747	chr19	+	58862410	58862652	True	NM_130786,NR_015380	chr19,chr19	-,+	A1BG,A1BG-AS1	2263,683
chr14:51278634-51279867	chr14	+	51278854	51279793	True	NM_181533,NM_020921	chr14,chr14	+,-	ABHD12B,NIN	59084,18097
chr9:21996330-21996688	chr9	+	21996329	21996655	True	NR_003529,NM_058195	chr9,chr9	+,-	CDKN2B-AS1,CDKN2A	-1590,-1839
chr3:135913336-135913647	chr3	+	135913450	135913682	True	NM_000532,NM_001145417,NM_018133	chr3,chr3,chr3	+,-,-	PCCB,MSL2,MSL2	55484,-140,1056
chr19:1812893-1813596	chr19	+	1813042	1813508	True	NR_031730,NR_034114,NM_138813,NM_001178002	chr19,chr19,chr19,chr19	-,+,-,-	MIR1909,LOC100288123,ATP8B3,ATP8B3	2779,8579,-772,-843
chr12:132627868-132628134	chr12	+	132627867	132628161	True	NM_175066,NM_024078	chr12,chr12	-,+	DDX51,NOC4L	769,831
chr17:37791808-37792403	chr17	+	37791951	37792439	True	NM_006160,NM_006804,NM_001165937,NM_181505,NM_001165938,NM_032192	chr17,chr17,chr17,chr17,chr17,chr17	-,+,+,+,+,+	NEUROD2,STARD3,STARD3,PPP1R1B,STARD3,PPP1R1B	-27776,893,893,-7249,893,-8823
chr5:180650916-180652055	chr5	+	180651090	180652092	True	NR_002592,NM_033549,NM_201627	chr5,chr5,chr5	-,+,+	SNORD96A,TRIM41,TRIM41	16847,-835,-835
chr2:202448151-202449360	chr2	+	202448310	202449171	True	NM_001168216,NM_018571	chr2,chr2	-,+	ALS2CR11,STRADB	34787,-131969
chr8:134582880-134583209	chr8	+	134582902	134583226	True	NM_003033,NR_037944,NM_173344	chr8,chr8,chr8	-,+,-	ST3GAL1,WISP1,ST3GAL1	1007,-379671,1007
chr9:97021110-97021582	chr9	+	97021280	97021629	True	NM_194320,NM_017561	chr9,chr9	+,-	ZNF169,FAM22F	44,69347
chr20:11898555-11898849	chr20	+	11898560	11898901	True	NM_000214,NM_014962	chr20,chr20	-,+	JAG1,BTBD3	-1243866,-46
chr5:96288957-96289615	chr5	+	96288957	96289638	True	NM_001198541,NM_175920	chr5,chr5	-,+	ERAP1,LNPEP	-139109,4517
chr15:76605230-76607084	chr15	+	76605250	76606532	True	NM_001127716,NM_145805,NM_000126	chr15,chr15,chr15	-,+,-	ETFA,ISL2,ETFA	-1440,22614,-1440
chr5:32586169-32587762	chr5	+	32586389	32587619	True	NM_016107,NM_006713	chr5,chr5	-,+	ZFR,SUB1	-141545,-835
chr3:196062780-196063168	chr3	+	196062789	196062933	True	NM_138461,NM_001204898,NM_152672,NM_001204897,NR_037950	chr3,chr3,chr3,chr3,chr3	-,-,+,-,-	TM4SF19,TM4SF19,OSTalpha,TM4SF19,TM4SF19-TCTEX1D2	2408,2408,-119457,2408,2408
chr5:40851772-40852924	chr5	+	40852284	40852846	True	NM_032587,NM_000997	chr5,chr5	+,-	CARD6,RPL37	-10934,-16897
chr1:44495398-44495788	chr1	+	44495469	44495723	True	NM_001024845,NM_152499	chr1,chr1	-,+	SLC6A9,CCDC24	1461,-38240
chr17:33310473-33311756	chr17	+	33310543	33311768	True	NM_006584,NM_013975,NM_002311	chr17,chr17,chr17	-,+,+	CCT6B,LIG3,LIG3	-22015,-3077,-3077
chr3:77148555-77149954	chr3	+	77148557	77149999	True	NM_001128929,NM_001128223	chr3,chr3	+,-	ROBO2,ZNF717	-1453,-1314302
chrY:20929879-20931052	chrY	+	20929887	20930752	True	NM_033108,NR_002159,NM_152584,NR_003509,NM_001001877,NR_003510,NM_153716	chrY,chrY,chrY,chrY,chrY,chrY,chrY	-,+,-,-,-,-,-	HSFY1,TTTY9B,HSFY1,HSFY2,HSFY2,HSFY1,HSFY2	4909,-38170,4906,4926,4906,4906,4926
chrY:20929879-20931052	chrY	-	20713421	20714286	False	NM_033108,NM_152584,NR_003509,NR_001530,NM_001001877,NR_003510,NM_153716	chrY,chrY,chrY,chrY,chrY,chrY,chrY	+,+,+,-,+,+,+	HSFY1,HSFY1,HSFY2,TTTY9A,HSFY2,HSFY1,HSFY2	-4905,-4902,-4922,38171,-4902,-4902,-4922
chr11:26405316-26405604	chr11	+	26405364	26405439	True	NM_031418,NM_001135091	chr11,chr11	+,-	ANO3,MUC15	-51750,188439
chr10:26732759-26734607	chr10	+	26732941	26734530	True	NM_001012750,NM_019043	chr10,chr10	-,+	ABI1,APBB1IP	415544,-5733
chr13:36052200-36052552	chr13	+	36052201	36052595	True	NM_001204197,NM_005584	chr13,chr13	+,-	NBEA,MAB21L1	-1373,-1369
chr4:1906779-1907696	chr4	+	1906868	1907290	True	NM_012318,NM_133334	chr4,chr4	-,+	LETM1,WHSC1	-48894,-4575
chr1:48375293-48376242	chr1	+	48375955	48376187	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	86425,312169
chr22:23486202-23487025	chr22	+	23486302	23486988	True	NM_004914,NM_014433	chr22,chr22	+,-	RAB36,RTDR1	524,-2061
chr19:52799671-52800085	chr19	+	52799687	52799949	True	NM_001102657,NM_144684	chr19,chr19	-,+	ZNF836,ZNF480	-124791,476
chrY:14775772-14775975	chrY	+	14775771	14775999	True	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	-1526,-242382
chrX:73640105-73640386	chrX	+	73640156	73640418	True	NM_006517,NR_028379	chrX,chrX	+,-	SLC16A2,MIR374AHG	666,-126747
chr9:26945048-26946846	chr9	+	26945207	26946688	True	NM_001099224,NM_001031689,NM_025103,NM_001099223,NM_001099222	chr9,chr9,chr9,chr9,chr9	+,-,+,+,+	IFT74,PLAA,IFT74,IFT74,IFT74	9682,830,9682,348,621
chr2:130878168-130878613	chr2	+	130878388	130878472	True	NM_001099771,NR_033903	chr2,chr2	-,+	POTEF,LOC285103	8373,8723
chr2:130878168-130878613	chr2	-	131975575	131975659	False	NM_001009993,NM_001083538	chr2,chr2	-,+	FAM168B,POTEE	-124571,264
chr21:43492298-43492931	chr21	+	43492311	43492797	True	NM_173568,NR_027243,NM_001199527,NM_001004416,NM_001199528	chr21,chr21,chr21,chr21,chr21	+,-,+,+,+	UMODL1,C21orf128,UMODL1,UMODL1,UMODL1	-936,35897,-9294,-936,-9294
chr11:27494419-27495387	chr11	+	27494696	27495314	True	NM_018490,NR_002832	chr11,chr11	-,+	LGR4,BDNF-AS1	-362,33084
chr19:46320097-46320581	chr19	+	46320288	46320612	True	NM_030785,NM_004497	chr19,chr19	-,+	RSPH6A,FOXA3	-1683,46905
chr19:34917168-34918600	chr19	+	34917351	34918245	True	NR_027620,NM_005499	chr19,chr19	-,+	LOC643719,UBA2	150407,1022
chr4:148539423-148540179	chr4	+	148539448	148539907	True	NM_018241,NM_138364	chr4,chr4	+,-	TMEM184C,PRMT10	-969,65429
chr12:22198525-22199198	chr12	+	22198589	22199015	True	NM_018686,NM_020298	chr12,chr12	+,-	CMAS,ABCC9	143,-108961
chr17:8275475-8275744	chr17	+	8275479	8275568	True	NM_213597,NM_153007	chr17,chr17	-,+	KRBA2,ODF4	-621,-32342
chr3:129606307-129608006	chr3	+	129606588	129607717	True	NM_001128224,NR_037893,NM_001017395	chr3,chr3,chr3	-,+,-	TMCC1,LOC100507032,TMCC1	4765,4996,-7186
chr10:111762190-111764012	chr10	+	111762323	111763929	True	NM_001121,NM_019903,NR_030724,NM_016824	chr10,chr10,chr10,chr10	+,+,-,+	ADD3,ADD3,XPNPEP1,ADD3	3781,1796,-79012,3781
chr17:42022746-42023999	chr17	+	42022790	42024001	True	NR_026770,NM_002722	chr17,chr17	+,-	C17orf88,PPY	-28265,-2957
chr17:46683045-46683512	chr17	+	46683056	46683462	True	NM_004502,NM_024016,NM_018952,NR_033205	chr17,chr17,chr17,chr17	-,-,-,+	HOXB7,HOXB8,HOXB6,LOC404266	4971,8889,-722,-9787
chr11:65342591-65343278	chr11	+	65342602	65343180	True	NM_001099409,NM_006396,NM_152832,NM_021070,NM_001098785,NM_001098784	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,-,+,+	EHBP1L1,SSSCA1,FAM89B,LTBP3,FAM89B,FAM89B	328,-4710,-2833,-16903,-2833,-2833
chr1:213189951-213190953	chr1	+	213190162	213190837	True	NM_144567,NM_001136138	chr1,chr1	-,+	ANGEL2,RPS6KC1	-994,33750
chr15:74612812-74613899	chr15	+	74613114	74613544	True	NM_001099773,NM_182791	chr15,chr15	-,+	CYP11A1,CCDC33	45059,-2265
chr5:118403102-118403831	chr5	+	118403182	118403809	True	NM_173666,NM_005509	chr5,chr5	-,+	DTWD2,DMXL1	-78942,3274
chr3:50194200-50194627	chr3	+	50194283	50194655	True	NM_004186,NM_006764	chr3,chr3	+,-	SEMA3F,IFRD2	-1486,135421
chr3:183980882-183981130	chr3	+	183980920	183981095	True	NM_033259,NM_001037324	chr3,chr3	-,+	CAMK2N2,ECE2	-1669,12703
chr12:110715304-110716572	chr12	+	110715408	110716528	True	NM_001135765,NM_170665,NM_001681,NM_016238	chr12,chr12,chr12,chr12	+,+,+,-	ATP2A2,ATP2A2,ATP2A2,ANAPC7	2503,2503,2503,125057
chr20:23419257-23419897	chr20	+	23419273	23419663	True	NM_080830,NM_138283	chr20,chr20	-,+	CST11,CSTL1	13878,658
chr1:173157658-173158157	chr1	+	173157658	173158203	True	NM_004905,NM_003326	chr1,chr1	+,-	PRDX6,TNFSF4	288282,18318
chr10:11785271-11785865	chr10	+	11785285	11785899	True	NM_014688,NM_024693	chr10,chr10	-,+	USP6NL,ECHDC3	-131606,-980
chrY:251031-251753	chrY	+	251079	251698	True	NR_027232,NM_013239	chrY,chrY	+,-	NCRNA00107,PPP2R3B	-19745,46042
chrY:251031-251753	chrX	+	301079	301698	False	NR_027232,NM_013239	chrX,chrX	+,-	NCRNA00107,PPP2R3B	-19745,46042
chr12:22775209-22776866	chr12	+	22775757	22776720	True	NM_014802,NM_018638,NM_001039481	chr12,chr12,chr12	-,+,+	KIAA0528,ETNK1,ETNK1	-78305,1355,1355
chr8:144120337-144120723	chr8	+	144120466	144120716	True	NR_026913,NM_173687	chr8,chr8	-,+	LOC100133669,C8orf31	-20659,22
chr6:155536024-155537100	chr6	+	155536189	155536623	True	NM_016020,NM_001010927	chr6,chr6	-,+	TFB1M,TIAM2	99052,1473
chr8:120219434-120220030	chr8	+	120219478	120220049	True	NM_052886,NM_002546	chr8,chr8	+,-	MAL2,TNFRSF11B	560,-255095
chr3:172166207-172166508	chr3	+	172166207	172166541	True	NM_018098,NM_004122,NM_198407	chr3,chr3,chr3	+,-,-	ECT2,GHSR,GHSR	305756,-7,-7
chr22:25367015-25368994	chr22	+	25367226	25368844	True	NM_001145206,NM_001001663	chr22,chr22	+,-	KIAA1671,TMEM211	55096,-31912
chr17:77767961-77768564	chr17	+	77768036	77768527	True	NM_005189,NM_020649	chr17,chr17	+,-	CBX2,CBX8	-16110,2438
chr21:28217197-28217413	chr21	+	28217295	28217459	True	NM_006988,NR_024357	chr21,chr21	-,+	ADAMTS1,NCRNA00113	319,877238
chr16:1879058-1880023	chr16	+	1879134	1879801	True	NM_001142398,NM_005326,NM_031208,NM_001040427,NM_001018104	chr16,chr16,chr16,chr16,chr16	+,-,+,-,+	FAHD1,HAGH,FAHD1,HAGH,FAHD1	-1960,-1939,-1960,-1939,-1960
chrX:102983479-102984598	chrX	+	102983517	102984553	True	NM_001024452,NM_001172285,NM_182541	chrX,chrX,chrX	-,-,+	GLRA4,GLRA4,TMEM31	35,35,-17731
chr17:33384025-33385712	chr17	+	33384239	33385518	True	NM_017559,NM_001017368	chr17,chr17	+,-	FNDC8,RFFL	63112,5292
chr2:101086800-101087526	chr2	+	101086813	101087517	True	NM_004854,NM_001011717	chr2,chr2	-,+	CHST10,NMS	-52683,80
chr5:99725275-99725547	chr5	+	99725290	99725596	True	NM_198507,NR_027503	chr5,chr5	+,-	FAM174A,LOC100133050	145527,-1332
chr11:66250655-66251494	chr11	+	66250787	66251382	True	NM_170739,NM_130443,NM_005700	chr11,chr11,chr11	-,+,+	MRPL11,DPP3,DPP3	-44477,-2958,-2958
chr3:190573406-190573936	chr3	+	190573418	190573719	True	NR_024343,NM_001146686	chr3,chr3	+,-	SNAR-I,GEMC1	21999,6809
chr18:52498390-52499097	chr18	+	52498461	52498847	True	NM_004163,NM_001143829	chr18,chr18	+,-	RAB27B,CCDC68	-2680,126482
chr12:55040007-55040806	chr12	+	55040092	55040660	True	NM_053283,NM_001165975	chr12,chr12	-,+	DCD,PDE1B	1546,-85051
chr11:65292310-65292511	chr11	+	65292438	65292518	True	NM_001048218,NM_001130144,NM_020680	chr11,chr11,chr11	+,-,+	SCYL1,LTBP3,SCYL1	29,33231,29
chr15:40547408-40549211	chr15	+	40547698	40549211	True	NM_020168,NM_001039905	chr15,chr15	+,-	PAK6,C15orf56	-15714,-2588
chr4:2467941-2468358	chr4	+	2468052	2468129	True	NM_001172657,NM_001185010,NM_002938,NM_001185009	chr4,chr4,chr4,chr4	-,+,+,+	ZFYVE28,RNF4,RNF4,RNF4	-47682,2665,2665,3050
chr15:88115925-88116293	chr15	+	88115936	88116210	True	NM_001012338,NR_026869	chr15,chr15	-,+	NTRK3,NCRNA00052	683501,3949
chr8:22551685-22551917	chr8	+	22551781	22551965	True	NM_021174,NM_001199880,NM_004430,NM_001199881	chr8,chr8,chr8,chr8	+,-,-,-	KIAA1967,EGR3,EGR3,EGR3	-89298,-1879,-966,-1688
chr1:186648484-186648972	chr1	+	186648486	186649013	True	NM_024420,NM_000963	chr1,chr1	+,-	PLA2G4A,PTGS2	149018,601
chr14:23771798-23772077	chr14	+	23771908	23772086	True	NM_001199864,NM_001199839,NM_004050,NR_026862	chr14,chr14,chr14,chr14	+,+,+,-	BCL2L2-PABPN1,BCL2L2,BCL2L2,PPP1R3E	3884,3982,3884,21
chr12:123754350-123754614	chr12	+	123754354	123754553	True	NM_001143905,NM_004642	chr12,chr12	+,-	C12orf65,CDK2AP1	-36114,2184
chr16:29799987-29801079	chr16	+	29800332	29800996	True	NM_175900,NM_007317	chr16,chr16	-,+	C16orf54,KIF22	-42992,1061
chr17:55334565-55335303	chr17	+	55334632	55335346	True	NM_004645,NM_138962,NM_170721	chr17,chr17,chr17	-,+,+	COIL,MSI2,MSI2	-296221,-752,-309
chr7:131391537-131392808	chr7	+	131391795	131392860	True	NM_005397,NM_013255	chr7,chr7	-,+	PODXL,MKLN1	-150419,-379262
chr3:170281503-170283382	chr3	+	170281661	170283409	True	NM_020949,NM_001185056	chr3,chr3	-,+	SLC7A14,CLDN11	20504,-142698
chr6:138968608-138968893	chr6	+	138968607	138968697	True	NM_020464,NR_033896	chr6,chr6	-,+	NHSL1,FLJ46906	-74939,44107
chr7:124405932-124406239	chr7	+	124406057	124406133	True	NM_005302,NM_001174046	chr7,chr7	-,+	GPR37,SPAM1	-376,-840199
chr1:219378119-219378553	chr1	+	219378135	219378419	True	NM_138794,NM_018713	chr1,chr1	+,-	LYPLAL1,SLC30A10	-30999,723636
chr22:38069244-38069837	chr22	+	38069251	38069715	True	NM_002305,NM_006498	chr22,chr22	+,-	LGALS1,LGALS2	1897,-93227
chr5:38845328-38845780	chr5	+	38845490	38845645	True	NM_003999,NM_001168355,NM_152756	chr5,chr5,chr5	+,+,-	OSMR,OSMR,RICTOR	455,314,228906
chr2:48010484-48010688	chr2	+	48010541	48010623	True	NM_025133,NM_000179	chr2,chr2	-,+	FBXO11,MSH6	105285,-371
chr10:38719713-38721157	chr10	+	38719713	38721169	True	NR_027269,NR_024497	chr10,chr10	-,+	SEPT7L,LOC399744	-27933,-2690
chr22:24982006-24982590	chr22	+	24982074	24982512	True	NM_207644,NM_013430	chr22,chr22	-,+	C22orf36,GGT1	6573,-2407
chr11:60381145-60382721	chr11	+	60381144	60382742	True	NR_026946,NM_004778	chr11,chr11	+,-	C11orf64,GPR44	481,240752
chr2:86336452-86338431	chr2	+	86336762	86338193	True	NM_015425,NM_017952	chr2,chr2	-,+	POLR1A,PTCD3	-3484,-3508
chr19:53933124-53934303	chr19	+	53933454	53934037	True	NR_003148,NM_001008401,NM_033341	chr19,chr19,chr19	+,+,-	LOC147804,ZNF761,BIRC8	1203,1189,-138579
chr4:25657525-25658324	chr4	+	25657567	25658373	True	NM_015187,NM_001177998,NM_001177999,NM_006424	chr4,chr4,chr4,chr4	-,+,+,+	SEL1L3,SLC34A2,SLC34A2,SLC34A2	206287,-183,20,-183
chr9:109626121-109626456	chr9	+	109626121	109626491	True	NR_031752,NM_021224	chr9,chr9	-,+	MIR548Q,ZNF462	222275,-794
chr13:21711520-21711972	chr13	+	21711709	21711807	True	NM_001166017,NM_005870	chr13,chr13	-,+	SKA3,SAP18	38992,2845
chr4:54965741-54966101	chr4	+	54965744	54966090	True	NM_133267,NM_012110	chr4,chr4	+,-	GSX2,CHIC2	157,-34956
chr4:17615747-17616050	chr4	+	17615757	17616084	True	NM_025205,NM_000320	chr4,chr4	+,-	MED28,QDPR	188,-101900
chr14:69691618-69692953	chr14	+	69691698	69692822	True	NM_003861,NR_034165,NM_001168368	chr14,chr14,chr14	-,+,+	DCAF5,EXD2,GALNTL1	-71784,-33276,33858
chr16:30134880-30136237	chr16	+	30134943	30136065	True	NM_002746,NM_001109891,NR_027081,NM_001040056	chr16,chr16,chr16,chr16	-,-,+,-	MAPK3,MAPK3,LOC100271831,MAPK3	-313,-313,-9563,-313
chr4:89619637-89621568	chr4	+	89619650	89621600	True	NR_002806,NM_153757	chr4,chr4	+,-	FAM13AOS,NAP1L5	9339,-627
chr18:9710827-9712069	chr18	+	9710977	9711961	True	NM_006868,NM_005134	chr18,chr18	+,-	RAB31,PPP4R1	-2800,-96377
chr12:85812895-85813427	chr12	+	85812894	85813479	True	NM_001100917,NM_006982	chr12,chr12	-,+	TSPAN19,ALX1	-382839,-138916
chr14:21739655-21739985	chr14	+	21739953	21740021	True	NM_001077443,NM_001077442,NM_020366,NM_004500,NM_031314	chr14,chr14,chr14,chr14,chr14	-,-,+,-,-	HNRNPC,HNRNPC,RPGRIP1,HNRNPC,HNRNPC	-2315,-2315,16114,-2315,-2315
chr8:26372264-26372527	chr8	+	26372378	26372564	True	NM_001197293,NM_007257	chr8,chr8	+,-	DPYSL2,PNMA2	-720,-895
chr5:90576485-90577374	chr5	+	90576676	90577401	True	NM_020801,NR_027435	chr5,chr5	-,+	ARRDC3,LOC100129716	101798,98762
chr10:30721319-30722103	chr10	+	30721815	30722141	True	NR_003524,NM_005204	chr10,chr10	-,+	LOC729668,MAP3K8	-58438,724
chr20:25564240-25564826	chr20	+	25564584	25564646	True	NM_025176,NM_021067	chr20,chr20	-,+	NINL,GINS1	1557,-176312
chr5:83678774-83679118	chr5	+	83678779	83678991	True	NM_005711,NM_004385	chr5,chr5	-,+	EDIL3,VCAN	1670,-911337
chr10:22643845-22644135	chr10	+	22644030	22644182	True	NM_172242,NM_012443,NR_036533	chr10,chr10,chr10	+,+,-	SPAG6,SPAG6,LOC100499489	-9690,-9690,82726
chr16:3356118-3356566	chr16	+	3356126	3356441	True	NM_153028,NM_033208	chr16,chr16	+,-	ZNF75A,TIGD7	-744,-687
chr9:140198848-140199084	chr9	+	140198897	140199075	True	NM_017723,NM_001004354	chr9,chr9	+,-	C9orf167,NRARP	-26668,-2194
chr11:72381927-72382145	chr11	+	72381933	72382033	True	NM_033388,NM_001146209,NM_002599	chr11,chr11,chr11	+,-,-	ATG16L2,PDE2A,PDE2A	143417,-1825,3511
chr1:186809760-186811265	chr1	+	186809963	186811137	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-160404,-11983
chr4:39412909-39413230	chr4	+	39413072	39413147	True	NM_002913,NM_175737	chr4,chr4	-,+	RFC1,KLB	-45071,-4658
chr20:49516044-49516488	chr20	+	49516136	49516472	True	NM_015339,NM_014484	chr20,chr20	-,+	ADNP,MOCS3	31105,58890
chr6:34206190-34206648	chr6	+	34206298	34206516	True	NM_002131,NM_145899,NM_001008703,NM_145902,NM_145903,NM_145901,NM_145905	chr6,chr6,chr6,chr6,chr6,chr6,chr6	+,+,-,+,+,+,+	HMGA1,HMGA1,C6orf1,HMGA1,HMGA1,HMGA1,HMGA1	-1772,-1772,10438,-1699,-1772,-1699,51
chr3:9855323-9856135	chr3	+	9855532	9855702	True	NR_037162,NM_133480,NM_001025930	chr3,chr3,chr3	+,-,+	TTLL3,TADA3,TTLL3	-3939,-21112,-3939
chr2:191026793-191027880	chr2	+	191026793	191027884	True	NM_005259,NM_001042520	chr2,chr2	-,+	MSTN,C2orf88	-99338,-11881
chr10:104210056-104210256	chr10	+	104210057	104210177	True	NM_024789,NM_024886	chr10,chr10	+,-	TMEM180,C10orf95	10992,1173
chrY:14388735-14389123	chrY	+	14388734	14388814	True	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	385483,144625
chr16:11372216-11373602	chr16	+	11372814	11373586	True	NM_005425,NM_021247,NM_152308,NM_002761,NM_002762	chr16,chr16,chr16,chr16,chr16	-,-,+,-,-	TNP2,PRM3,C16orf75,PRM1,PRM2	-9654,-5362,65724,1656,-2477
chr20:17682966-17683750	chr20	+	17682987	17683789	True	NM_001014977,NM_001159495,NM_004587,NM_178477	chr20,chr20,chr20,chr20	+,+,-,+	BANF2,BANF2,RRBP1,BANF2	-2445,-8718,-20059,-2445
chr19:3587370-3587779	chr19	+	3587569	3587642	True	NM_001060,NM_133261	chr19,chr19	-,+	TBXA2R,GIPC3	19250,-2051
chr16:69760640-69760870	chr16	+	69760735	69760909	True	NM_001025433,NM_000903,NM_199423,NM_001025434	chr16,chr16,chr16,chr16	-,-,+,-	NQO1,NQO1,WWP2,NQO1	-202,-202,35364,-202
chr19:20013841-20014270	chr19	+	20013842	20014246	True	NM_001145404,NM_031218	chr19,chr19	-,+	ZNF506,ZNF93	-81282,-2176
chr11:72980864-72982233	chr11	+	72980983	72982162	True	NM_014824,NM_176797,NM_176796,NM_176798,NM_004154	chr11,chr11,chr11,chr11,chr11	-,+,+,+,+	FCHSD2,P2RY6,P2RY6,P2RY6,P2RY6	-127840,-5466,-5466,-97,1084
chr12:101865806-101866460	chr12	+	101866117	101866231	True	NM_152323,NM_001177	chr12,chr12	+,-	SPIC,ARL1	5103,-64545
chr1:43425154-43425367	chr1	+	43425162	43425366	True	NR_033967,NM_006516	chr1,chr1	+,-	FLJ32224,SLC2A1	-493,-315
chr6:13817406-13818277	chr6	+	13818002	13818321	True	NM_001165034,NM_001031713	chr6,chr6	+,-	RNF182,CCDC90A	106355,-3213
chr19:45927716-45928270	chr19	+	45927762	45928174	True	NM_001166049,NM_202001,NM_012099,NM_001983	chr19,chr19,chr19,chr19	-,-,+,-	ERCC1,ERCC1,CD3EAP,ERCC1	-585,-942,-18359,-585
chr12:93861203-93861429	chr12	+	93861271	93861435	True	NM_003348,NM_014050,NM_172177,NM_172178	chr12,chr12,chr12,chr12	-,+,+,+	UBE2N,MRPL42,MRPL42,MRPL42	-25245,-52,-52,-52
chr20:23330690-23330911	chr20	+	23330786	23330902	True	NM_013248,NM_022080	chr20,chr20	+,-	NXT1,NAPB	470,71304
chr15:23155414-23157001	chr15	+	23155473	23156830	True	NR_024074,NR_003521	chr15,chr15	+,-	GOLGA8IP,WHAMML1	98411,51584
chr15:23155414-23157001	chr15	-	29035685	29035742	False	NR_036475,NR_033351,NR_037599	chr15,chr15,chr15	+,-,+	LOC100289656,GOLGA8F,LOC646278	-2354,-257542,-763
chr22:50926079-50926401	chr22	+	50926100	50926416	True	NM_024866,NM_017584,NM_002972	chr22,chr22,chr22	+,+,-	ADM2,MIOX,SBF1	-6139,-938,-12636
chr11:627580-628121	chr11	+	627586	628090	True	NM_031264,NM_021924,NM_001171968,NM_000797,NM_021920	chr11,chr11,chr11,chr11,chr11	-,-,-,+,-	CDHR5,CDHR5,CDHR5,DRD4,SCT	-2519,-2519,-2519,9214,-413
chr1:32170626-32170869	chr1	+	32170629	32170781	True	NM_001856,NM_001525	chr1,chr1	-,+	COL16A1,HCRTR1	-861,-87379
chr11:93752481-93753050	chr11	+	93752660	93752740	True	NM_001098672,NM_001144871	chr11,chr11	+,-	HEPHL1,C11orf90	1637,-168992
chr15:75155957-75157282	chr15	+	75155983	75156997	True	NM_005697,NM_002435	chr15,chr15	-,+	SCAMP2,MPI	8723,25412
chr2:220028044-220028513	chr2	+	220028051	220028382	True	NM_024782,NM_001144889,NM_024293,NM_001144890,NM_144712	chr2,chr2,chr2,chr2,chr2	-,-,+,-,-	NHEJ1,SLC23A3,FAM134A,SLC23A3,SLC23A3	-2464,6486,14556,6486,6486
chr7:47293532-47293790	chr7	+	47293536	47293662	True	NM_001123065,NM_022748	chr7,chr7	+,-	C7orf65,TNS3	401179,328130
chr9:15305949-15306302	chr9	+	15306031	15306305	True	NM_001168341,NM_001168340,NM_001039697,NM_001168339,NM_152574	chr9,chr9,chr9,chr9,chr9	-,-,+,-,-	TTC39B,TTC39B,SNAPC3,TTC39B,TTC39B	1103,1103,116476,1103,1103
chr3:133970415-133970818	chr3	+	133970563	133970799	True	NM_002958,NM_001042383,NM_001005861	chr3,chr3,chr3	-,+,-	RYK,CEP63,RYK	-977,233775,-977
chr11:106868451-106869221	chr11	+	106868460	106869227	True	NM_001130037,NM_000855	chr11,chr11	+,-	ELMOD1,GUCY1A2	592589,20007
chr6:138721290-138723257	chr6	+	138721614	138723240	True	NR_036099,NM_014320	chr6,chr6	-,+	MIR3145,HEBP2	33241,2095
chr12:57852331-57852822	chr12	+	57852517	57852868	True	NM_001167609,NM_001080156,NM_031479,NM_005269,NM_001160045	chr12,chr12,chr12,chr12,chr12	+,-,+,+,+	GLI1,ARHGAP9,INHBE,GLI1,GLI1	1065,18910,-3472,1065,1049
chr2:220144446-220144986	chr2	+	220144556	220144828	True	NM_001039550,NR_029688,NM_006736	chr2,chr2,chr2	+,-,+	DNAJB2,MIR153-1,DNAJB2	-567,14144,-567
chr10:97762646-97763266	chr10	+	97762842	97763130	True	NM_001001732,NR_036113,NM_001159747	chr10,chr10,chr10	+,-,+	CC2D2B,MIR3157,CC2D2B	-3045,61078,-3045
chr4:110706105-110707345	chr4	+	110706464	110707263	True	NM_018983,NM_000204	chr4,chr4	+,-	GAR1,CFI	29402,16122
chr18:78006027-78007268	chr18	+	78006123	78007317	True	NR_028339	chr18	+	LOC100130522	-100367
chr14:94980974-94981310	chr14	+	94980998	94981342	True	NM_173850,NM_006215	chr14,chr14	-,+	SERPINA12,SERPINA4	2889,46440
chr10:102824890-102825985	chr10	+	102825170	102825892	True	NM_024895,NM_030929	chr10,chr10	-,+	PDZD7,KAZALD1	-34256,-4222
chr6:26197377-26198649	chr6	+	26197460	26198520	True	NM_021065,NM_003545,NM_003539,NM_003530,NM_003522	chr6,chr6,chr6,chr6,chr6	-,+,-,-,+	HIST1H2AD,HIST1H4E,HIST1H4D,HIST1H3D,HIST1H2BF	1009,6352,-8156,1002,1266
chr4:2063274-2063489	chr4	+	2063321	2063417	True	NM_005663,NM_178557	chr4,chr4	-,+	WHSC2,NAT8L	-52362,-2133
chr13:98085690-98086284	chr13	+	98085786	98086204	True	NM_080818,NM_021033	chr13,chr13	-,+	OXGR1,RAP2A	-439182,270
chr5:24603860-24604751	chr5	+	24603895	24604583	True	NM_020227,NM_006727	chr5,chr5	+,-	PRDM9,CDH10	-1096228,40560
chr15:52052925-52053486	chr15	+	52053065	52053499	True	NM_001143917,NM_014548,NM_001142885	chr15,chr15,chr15	-,+,+	LYSMD2,TMOD2,TMOD2	-9415,-9365,-9365
chr17:68083770-68084580	chr17	+	68083872	68084319	True	NM_170741,NR_036534	chr17,chr17	+,-	KCNJ16,FLJ36644	-12502,81274
chr3:195313744-195315470	chr3	+	195314043	195315507	True	NM_001647,NR_003265	chr3,chr3	-,+	APOD,SDHAP2	-2967,69402
chr1:185017418-185018878	chr1	+	185017478	185018912	True	NM_052966,NM_007212	chr1,chr1	-,+	FAM129A,RNF2	-73796,-2992
chr21:38463972-38465601	chr21	+	38464305	38465205	True	NM_003316,NR_028352	chr21,chr21	+,-	TTC3,PIGP	-9116,-18847
chr1:11936844-11937721	chr1	+	11937181	11937401	True	NM_002521,NR_037806	chr1,chr1	-,+	NPPB,NPPA-AS1	-18189,-36856
chr13:30885697-30886804	chr13	+	30885789	30886841	True	NM_005800,NM_032116,NM_001014380	chr13,chr13,chr13	+,-,-	USPL1,KATNAL1,KATNAL1	304988,-4205,-4626
chr11:69195833-69196699	chr11	+	69195929	69196715	True	NM_153451,NM_138768	chr11,chr11	-,+	ORAOV1,MYEOV	293500,-134358
chr5:179635295-179635630	chr5	+	179635406	179635594	True	NM_015455,NM_175062	chr5,chr5	+,-	CNOT6,RASGEF1C	285822,586
chr17:72358211-72358423	chr17	+	72358228	72358456	True	NM_181790,NM_001080466	chr17,chr17	+,-	GPR142,BTBD17	5188,-270
chr8:21947398-21947654	chr8	+	21947401	21947647	True	NM_024815,NM_022749	chr8,chr8	-,+	NUDT18,FAM160B2	19335,-738
chr20:60879425-60879734	chr20	+	60879517	60879733	True	NM_007002,NM_175573,NM_005560	chr20,chr20,chr20	+,+,-	ADRM1,ADRM1,LAMA5	-1541,-1541,62685
chr5:37835029-37835349	chr5	+	37835033	37835177	True	NM_152403,NM_000514,NM_001190469,NM_001190468,NM_199231	chr5,chr5,chr5,chr5,chr5	+,-,-,-,-	EGFLAM,GDNF,GDNF,GDNF,GDNF	423355,4655,802,802,466
chr20:35808114-35809353	chr20	+	35808242	35809089	True	NM_152503,NM_001135771,NM_213632,NM_002951,NM_213631	chr20,chr20,chr20,chr20,chr20	-,+,-,+,-	C20orf132,RPN2,C20orf132,RPN2,C20orf132	-268,-837,-268,-837,-268
chr20:5917874-5919307	chr20	+	5918003	5919323	True	NM_032485,NM_015939	chr20,chr20	+,-	MCM8,TRMT6	11974,11900
chr19:42817754-42818003	chr19	+	42817893	42817971	True	NM_173633,NM_001145940	chr19,chr19	+,-	TMEM145,PAFAH1B3	-467,-10941
chr22:36214066-36214594	chr22	+	36214066	36214553	True	NM_030642,NM_001031695	chr22,chr22	+,-	APOL5,RBFOX2	-100205,22136
chr3:52027260-52027884	chr3	+	52027417	52027665	True	NM_000992,NM_001198898	chr3,chr3	-,+	RPL29,ACY1	2343,-10168
chr19:53238777-53239131	chr19	+	53238792	53239162	True	NR_023311,NM_001161499,NM_001161500,NM_001161501,NM_030972	chr19,chr19,chr19,chr19,chr19	+,-,-,-,-	ZNF137P,ZNF611,ZNF611,ZNF611,ZNF611	-138906,-485,-485,-495,-5657
chr2:217275130-217276815	chr2	+	217275263	217276772	True	NM_014140,NM_020814,NM_001127207	chr2,chr2,chr2	+,-,+	SMARCAL1,MARCH4,SMARCAL1	364,-38513,700
chr16:20077085-20078341	chr16	+	20077377	20078123	True	NM_001002911,NM_017888	chr16,chr16	-,+	GPR139,ACSM5	7027,342732
chr14:23569235-23569666	chr14	+	23569545	23569716	True	NM_001164815,NM_001164814,NM_017924,NM_014977	chr14,chr14,chr14,chr14	-,-,+,-	ACIN1,ACIN1,C14orf119,ACIN1	-4722,-4722,-4808,-4722
chr1:36023094-36023324	chr1	+	36023120	36023362	True	NM_014284,NM_001014839,NM_001014841,NM_024874	chr1,chr1,chr1,chr1	+,+,+,-	NCDN,NCDN,NCDN,KIAA0319L	30,30,30,-83
chr8:37705761-37707276	chr8	+	37706096	37707183	True	NM_018310,NM_032777	chr8,chr8	-,+	BRF2,GPR124	298,-51746
chr5:169811520-169812300	chr5	+	169811550	169812216	True	NM_004137,NM_001034838	chr5,chr5	-,+	KCNMB1,KCNIP1	4472,-30721
chr8:23315548-23315864	chr8	+	23315589	23315875	True	NM_016612,NM_001128930,NM_004901	chr8,chr8,chr8	+,-,-	SLC25A37,ENTPD4,ENTPD4	70487,-345,-453
chr12:58027772-58028866	chr12	+	58028074	58028927	True	NM_001478,NM_133489	chr12,chr12	-,+	B4GALNT1,SLC26A10	-1089,-14439
chr20:43994284-43994989	chr20	+	43994294	43995022	True	NM_014477,NM_033542,NR_003189,NM_001099791,NM_001197129	chr20,chr20,chr20,chr20,chr20	-,+,+,+,+	TP53TG5,SYS1,SYS1-DBNDD2,SYS1,SYS1	11985,-2605,-2536,-2605,-3768
chr7:74684027-74684273	chr7	+	74684099	74684169	True	NM_001003795,NR_003580	chr7,chr7	+,-	GTF2IRD2B,LOC100093631	-175804,-30640
chr7:74684027-74684273	chr7	-	72538458	72538528	False	NR_003664,NR_003580	chr7,chr7	-,+	SPDYE8P,LOC100093631	-38149,30483
chr7:74684027-74684273	chr7	-	74347916	74347986	False	NM_001025202,NM_001145063	chr7,chr7	-,+	STAG3L2,GATSL1	-41185,31096
chr7:74684027-74684273	chr7	+	74898352	74898422	False	NM_001145064,NR_003664	chr7,chr7	-,+	GATSL2,SPDYE8P	-31011,38110
chr17:73268843-73270388	chr17	+	73268985	73270226	True	NR_036520,NM_020679	chr17,chr17	+,-	LOC100287042,MIF4GD	-1656,-1682
chr4:83721595-83722053	chr4	+	83721596	83721908	True	NM_024672,NM_001037582,NM_024906	chr4,chr4,chr4	+,-,-	THAP9,SCD5,SCD5	99928,-1586,-1586
chrX:154493341-154493543	chrX	+	154493362	154493578	True	NM_003372,NM_171998	chrX,chrX	+,-	VBP1,RAB39B	-48712,324
chr16:88706016-88706365	chr16	+	88706099	88706335	True	NM_013278,NM_000101	chr16,chr16	+,-	IL17C,CYBA	-1149,11172
chrX:74334824-74335156	chrX	+	74335141	74335205	True	NM_145052,NM_004299	chrX,chrX	+,-	UPRT,ABCB7	158688,40981
chr8:22130039-22130328	chr8	+	22130096	22130236	True	NM_001135721,NM_018068,NR_029714	chr8,chr8,chr8	+,+,-	PIWIL2,PIWIL2,MIR320A	2843,2573,-27540
chr8:105479365-105479860	chr8	+	105479409	105479846	True	NM_001385,NM_030788	chr8,chr8	-,+	DPYS,TM7SF4	-132,-127406
chr1:151019575-151020233	chr1	+	151019732	151020154	True	NM_001038707,NM_017860	chr1,chr1	-,+	CDC42SE1,C1orf56	12021,104
chr12:4208599-4209529	chr12	+	4208950	4209571	True	NM_001759,NM_020367	chr12,chr12	+,-	CCND2,PARP11	173330,-226342
chr5:134781352-134782353	chr5	+	134781397	134782397	True	NM_145282,NM_130848,NM_001099221	chr5,chr5,chr5	+,-,-	SLC25A48,C5orf20,TIFAB	387967,691,5742
chr4:11429425-11429671	chr4	+	11429430	11429692	True	NR_030298,NM_005114	chr4,chr4	+,-	MIR572,HS3ST1	-59030,895
chr20:44563063-44563329	chr20	+	44563104	44563350	True	NM_022104,NM_182676	chr20,chr20	+,-	PCIF1,PLTP	-12,-22318
chr1:240257048-240257465	chr1	+	240257110	240257504	True	NM_022469,NM_020066	chr1,chr1	-,+	GREM2,FMN2	518008,-1976
chr4:57373887-57374711	chr4	+	57374266	57374545	True	NM_002703,NM_206919	chr4,chr4	-,+	PPAT,ARL9	-72464,-2942
chr15:45139030-45140575	chr15	+	45139049	45140420	True	NM_001145112,NM_152448	chr15,chr15	-,+	PATL2,C15orf43	-169963,108482
chr15:45139030-45140575	chr15	-	45335268	45336009	False	NR_034039,NM_014080	chr15,chr15	+,-	SORD,DUOX2	-20018,70402
chr3:43022625-43024223	chr3	+	43022642	43024261	True	NM_004391,NM_001129908	chr3,chr3	-,+	CYP8B1,FAM198A	-105009,-1934
chrY:2558637-2559002	chrY	+	2558723	2559045	True	NM_003140,NM_002414,NM_001122898	chrY,chrY,chrY	-,+,+	SRY,CD99,CD99	96797,182,182
chrY:2558637-2559002	chrX	+	2608723	2609045	False	NR_037842,NM_002414,NM_001122898	chrX,chrX,chrX	-,+,+	NCRNA00102,CD99,CD99	-75335,182,182
chr3:136688526-136689738	chr3	+	136688564	136689422	True	NM_144717,NM_005862	chr3,chr3	+,-	IL20RB,STAG1	-11908,-217319
chr22:50964934-50965217	chr22	+	50964999	50965185	True	NM_005138,NM_001953,NM_001169111,NM_001169110,NM_001014440,NM_152299,NM_001169109,NM_001113755,NM_001113756	chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,-,+,-,-,-	SCO2,TYMP,SCO2,SCO2,ODF3B,NCAPH2,SCO2,TYMP,TYMP	-965,3379,-966,-425,5873,-18405,-131,3379,3123
chr22:50609464-50609750	chr22	+	50609572	50609788	True	NR_027691,NM_052839,NM_001160300,NM_020461	chr22,chr22,chr22,chr22	+,+,+,-	PANX2,PANX2,PANX2,TUBGCP6	-463,-463,-463,73662
chr19:41883841-41884827	chr19	+	41884061	41884691	True	NM_001098824,NM_030578,NM_001098821,NM_001098822,NM_001098823,NM_001042595	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+	TMEM91,B9D2,TMEM91,TMEM91,TMEM91,TMEM91	-1674,-13983,-1674,-1674,-1674,-943
chr13:49737437-49738900	chr13	+	49738138	49738571	True	NM_014923,NM_030925	chr13,chr13	+,-	FNDC3A,CAB39L	-53740,237227
chr19:36025441-36025753	chr19	+	36025503	36025687	True	NM_001166035,NM_001166034,NM_014364,NM_198538	chr19,chr19,chr19,chr19	-,-,+,-	SBSN,SBSN,GAPDHS,SBSN	-6250,-6250,-1240,-6250
chr19:13227859-13228068	chr19	+	13227899	13228057	True	NM_017722,NM_001136035,NM_001142554,NM_052876	chr19,chr19,chr19,chr19	-,-,-,+	TRMT1,TRMT1,TRMT1,NACC1	-436,-336,-436,1051
chr7:142582075-142583008	chr7	+	142582115	142582915	True	NM_004445,NM_018646	chr7,chr7	+,-	EPHB6,TRPV6	-29375,614
chr1:1183131-1183660	chr1	+	1183218	1183538	True	NM_080605,NM_001014980	chr1,chr1	+,-	B3GALT6,FAM132A	-15640,-1116
chr1:29560188-29561185	chr1	+	29560220	29561141	True	NM_016011,NM_133177,NM_133178,NM_001195001,NM_001024732,NM_005704	chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,+,-,+	MECR,PTPRU,PTPRU,PTPRU,MECR,PTPRU	-2766,1886,1886,1886,-2766,1886
chr7:32930512-32930821	chr7	+	32930514	32930772	True	NM_015483,NM_007270	chr7,chr7	-,+	KBTBD2,FKBP9	746,66232
chr20:34132712-34133172	chr20	+	34132864	34133032	True	NM_015966,NM_198398,NM_001145350	chr20,chr20,chr20	+,+,-	ERGIC3,ERGIC3,C20orf173	-3137,-3137,-15383
chr19:998688-998932	chr19	+	998767	998972	True	NM_138690,NM_001033026	chr19,chr19	+,-	GRIN3B,C19orf6	1464,22222
chr12:108168291-108168985	chr12	+	108168291	108169000	True	NM_012406,NM_203436	chr12,chr12	-,+	PRDM4,ASCL4	-13377,-181
chr11:104871089-104871319	chr11	+	104871096	104871364	True	NM_001077244,NM_001136109	chr11,chr11	+,-	GRIA4,CASP5	609435,22581
chr20:30326011-30326372	chr20	+	30326147	30326414	True	NM_012112,NM_138578	chr20,chr20	+,-	TPX2,BCL2L1	489,-15491
chr12:19291361-19291815	chr12	+	19291611	19291831	True	NM_019012,NM_033123,NM_001143821,NM_001190860	chr12,chr12,chr12,chr12	+,-,+,+	PLEKHA5,PLCZ1,PLEKHA5,PLEKHA5	-9036,-400693,-9036,-9036
chr8:110984713-110985368	chr8	+	110984784	110985198	True	NM_014379,NM_004215	chr8,chr8	-,+	KCNV1,EBAG9	1817,-432525
chr11:3079512-3080111	chr11	+	3079884	3080156	True	NM_001194997,NM_001014437,NR_036542,NM_139273,NM_001751,NM_002555	chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,-,+	CARS,CARS,CARS,CARS,CARS,SLC22A18	-1203,-1203,-1203,-1203,-1203,-156424
chr19:51920155-51920495	chr19	+	51920184	51920450	True	NM_033130,NM_001171156,NM_001171157,NR_033235,NM_001171161,NM_001171160,NM_001171158,NM_001171159	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,+,-,-,-,-	SIGLEC10,SIGLEC10,SIGLEC10,LOC100129083,SIGLEC10,SIGLEC10,SIGLEC10,SIGLEC10	657,657,657,-1075,657,657,657,657
chr16:1465825-1467209	chr16	+	1466012	1467058	True	NM_032520,NM_001193388,NM_001037125	chr16,chr16,chr16	+,-,-	GNPTG,UNKL,UNKL	-64170,-1307,-1307
chr12:65152396-65152712	chr12	+	65152431	65152733	True	NM_002076,NM_015279	chr12,chr12	-,+	GNS,TBC1D30	543,65618
chr11:124934111-124935601	chr11	+	124934344	124935624	True	NM_198277,NM_001080546,NM_001145290	chr11,chr11,chr11	+,-,+	SLC37A2,TMEM218,SLC37A2	-1382,37631,-1382
chr20:61002503-61002737	chr20	+	61002582	61002780	True	NM_001024,NM_080833	chr20,chr20	+,-	RPS21,C20orf151	-40512,7
chr1:40235551-40235809	chr1	+	40235628	40235858	True	NM_022120,NM_001195007	chr1,chr1	-,+	OXCT2,PPIE	1212,-31162
chr1:40235551-40235809	chr1	-	39981677	39981907	False	NR_003929,NM_181809	chr1,chr1	-,+	PPIEL,BMP8A	43513,-24410
chr1:2461961-2462337	chr1	+	2462096	2462318	True	NM_018216,NM_003820,NM_001010926	chr1,chr1,chr1	-,+,-	PANK4,TNFRSF14,HES5	-4061,25486,-412
chr17:75283570-75284053	chr17	+	75283839	75284053	True	NM_001113492,NM_001113491,NR_036200	chr17,chr17,chr17	+,+,-	SEPT9,SEPT9,MIR4316	-3,-6398,109133
chr3:50338127-50338970	chr3	+	50338188	50338771	True	NM_001200016,NM_001200029,NM_003549,NM_001200030,NM_001200031,NM_001200032,NM_012191,NM_001200018,NM_153285,NM_007312,NM_153282,NM_153215,NM_153283,NM_006764,NM_033159	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,-,-,-,-,-,-,-,+,-,-,-	NAT6,HYAL3,HYAL3,HYAL3,HYAL3,HYAL3,NAT6,NAT6,HYAL1,HYAL1,HYAL1,C3orf45,HYAL1,IFRD2,HYAL1	-1336,-1895,-1289,-1289,-1289,-1289,-1336,-1868,2283,2283,2283,-21721,2283,-8162,2283
chr7:86836766-86837329	chr7	+	86836932	86837240	True	NM_024315,NM_021145	chr7,chr7	-,+	C7orf23,DMTF1	11841,-55113
chr19:50847562-50847928	chr19	+	50847719	50847853	True	NM_007121,NR_002798	chr19,chr19	+,-	NR1H2,NAPSB	31831,202
chr7:140181108-140181727	chr7	+	140181289	140181602	True	NM_013446,NM_001008749,NM_001145125	chr7,chr7,chr7	-,+,-	MKRN1,RAB19,MKRN1	-1920,-77504,-1920
chr12:8187113-8188411	chr12	+	8187368	8188410	True	NM_004054,NM_018416	chr12,chr12	-,+	C3AR1,FOXJ2	30595,-2065
chr6:12514904-12516734	chr6	+	12515053	12516660	True	NM_030948,NM_032744	chr6,chr6	+,-	PHACTR1,C6orf105	201172,-735773
chr1:97184633-97185593	chr1	+	97184743	97185315	True	NM_000110,NM_021190	chr1,chr1	-,+	DPYD,PTBP2	1201358,1859
chr16:47550130-47551325	chr16	+	47550361	47551149	True	NM_030790,NM_001031835	chr16,chr16	-,+	ITFG1,PHKB	-55346,-55202
chr20:37373976-37375745	chr20	+	37374237	37375567	True	NR_027241,NM_024855	chr20,chr20	-,+	LOC388796,ACTR5	-310219,1529
chr11:12131512-12131876	chr11	+	12131526	12131768	True	NM_013253,NM_014632	chr11,chr11	-,+	DKK3,MICAL2	-100609,369
chr7:23222660-23223051	chr7	+	23222687	23222828	True	NM_032581,NM_007342	chr7,chr7	-,+	FAM126A,NUPL2	-168917,-1292
chr2:86332661-86332978	chr2	+	86332721	86333009	True	NM_015425,NM_017952	chr2,chr2	-,+	POLR1A,PTCD3	319,295
chr17:60449935-60451541	chr17	+	60449937	60451097	True	NM_173503,NR_027486,NM_001144933	chr17,chr17,chr17	+,-,+	EFCAB3,TBC1D3P2,EFCAB3	6816,-96921,-2417
chr20:44032065-44033720	chr20	+	44032068	44033744	True	NM_001197140,NM_014477,NM_001197139,NM_001048226,NM_001048225,NM_001048224,NM_001048223,NM_001048222,NM_001048221,NM_018478	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,-,+,+,+,+,+,+,+,+	DBNDD2,TP53TG5,DBNDD2,DBNDD2,DBNDD2,DBNDD2,DBNDD2,DBNDD2,DBNDD2,DBNDD2	1076,-25111,888,2884,2884,1483,1483,910,910,1116
chr5:93954668-93955667	chr5	+	93954876	93955532	True	NM_001145678,NM_173665,NM_032290	chr5,chr5,chr5	-,-,+	KIAA0825,KIAA0825,ANKRD32	-567,-567,-536
chr4:183245271-183245578	chr4	+	183245276	183245585	True	NM_001080477,NR_027107	chr4,chr4	+,-	ODZ3,MGC45800	-190,-179608
chr7:1654135-1655796	chr7	+	1654340	1655305	True	NM_001134340,NR_001288	chr7,chr7	-,+	PSMG3,TFAMP1	-44672,-288
chr22:37406276-37406835	chr22	+	37406299	37406861	True	NM_021126,NM_001163857,NM_001013436,NR_024038,NM_178552,NM_003312,NM_001130517	chr22,chr22,chr22,chr22,chr22,chr22,chr22	+,-,+,+,-,-,+	MPST,C22orf33,MPST,MPST,C22orf33,TST,MPST	8840,-2422,8840,8840,-2422,8680,8840
chr14:69725530-69726073	chr14	+	69725631	69726031	True	NM_003861,NM_020692,NM_001168368	chr14,chr14,chr14	-,+,+	DCAF5,GALNTL1,GALNTL1	-105717,649,649
chrX:150343334-150343556	chrX	+	150343382	150343469	True	NR_036256,NM_134446,NM_004224	chrX,chrX,chrX	+,-,+	MIR4330,CD99L2,GPR50	-6751,-276093,1586
chr11:46741450-46741754	chr11	+	46741449	46741803	True	NM_000506,NM_004308	chr11,chr11	+,-	F2,ARHGAP1	-757,-19329
chr14:23505880-23506205	chr14	+	23505947	23506177	True	NM_001144932,NM_001099780,NM_002797,NM_001130725	chr14,chr14,chr14,chr14	-,+,-,-	PSMB5,PSMB11,PSMB5,PSMB5	-1593,5198,-1593,-1518
chr22:25027446-25027747	chr22	+	25027510	25027618	True	NR_024593,NR_024494	chr22,chr22	-,+	POM121L10P,BCRP3	27546,1263
chr22:25027446-25027747	chr22	-	24642300	24642797	False	NM_001099782,NM_001099781,NM_004121,NR_003714	chr22,chr22,chr22,chr22	-,-,-,+	GGT5,GGT5,GGT5,POM121L9P	-1190,-1190,-1190,4791
chr22:25027446-25027747	chr20	-	23963056	23963140	False	NM_178312,NM_178311,NR_001279	chr20,chr20,chr20	-,-,+	GGTLC1,GGTLC1,CSTT	4452,6356,-463354
chr19:59086982-59087242	chr19	+	59087037	59087257	True	NM_003422	chr19	-	MZF1	-2095
chr4:177158830-177159296	chr4	+	177158964	177159084	True	NM_021928,NM_080874	chr4,chr4	+,-	SPCS3,ASB5	82005,31339
chr1:241714355-241715146	chr1	+	241714363	241715161	True	NM_003679,NM_000143	chr1,chr1	+,-	KMO,FH	-18741,-31278
chr12:76742601-76742922	chr12	+	76742651	76742811	True	NM_015336,NM_024685	chr12,chr12	+,-	ZDHHC17,BBS10	415042,-429
chr7:47291427-47293305	chr7	+	47291513	47293166	True	NM_001123065,NM_022748	chr7,chr7	+,-	C7orf65,TNS3	401675,328628
chr6:151559623-151560841	chr6	+	151559821	151560858	True	NM_005100,NM_020861	chr6,chr6	+,-	AKAP12,ZBTB2	275,151869
chr14:32031608-32031900	chr14	+	32031621	32031779	True	NR_036675,NM_025152	chr14,chr14	-,+	GPR33,NUBPL	-74470,-1087
chr19:47219042-47219496	chr19	+	47219120	47219496	True	NM_001079882,NM_001039885,NM_001079880,NM_001079881,NM_016457,NR_036157	chr19,chr19,chr19,chr19,chr19,chr19	-,+,-,-,-,-	PRKD2,FKRP,PRKD2,PRKD2,PRKD2,MIR320E	-1543,29806,938,938,938,-6518
chr15:90294492-90294725	chr15	+	90294654	90294728	True	NM_018670,NM_001039958	chr15,chr15	-,+	MESP1,MESP2	-114,24860
chr1:28905620-28907103	chr1	+	28905946	28906956	True	NR_024127,NR_002987,NR_003077,NM_152304,NR_002976,NR_003035	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,-	SNHG12,SNORA61,SNORD99,RAB42,SNORA44,SNORA16A	1460,63,-612,11755,118,659
chr7:150689159-150689698	chr7	+	150689298	150689440	True	NM_172056,NM_001160110,NM_001160109,NM_000603,NM_001160111	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	KCNH2,NOS3,NOS3,NOS3,NOS3	-13896,1451,1451,-1205,1451
chrX:100116021-100117279	chrX	+	100116382	100117224	True	NM_001325,NM_007052	chrX,chrX	+,-	CSTF2,NOX1	-41086,12160
chr17:19647172-19647431	chr17	+	19647270	19647432	True	NM_000382,NM_001135168,NM_001135167,NM_000691	chr17,chr17,chr17,chr17	+,-,-,-	ALDH3A2,ALDH3A1,ALDH3A1,ALDH3A1	-95257,1390,1543,4364
chr14:98650630-98651561	chr14	+	98650784	98651602	True	NR_015430,NM_182560	chr14,chr14	-,+	C14orf64,C14orf177	-206323,526347
chr15:93333563-93334286	chr15	+	93333600	93333688	True	NR_033769,NM_207446	chr15,chr15	+,-	ASB9P1,FAM174B	5025,-134569
chr4:37689672-37690221	chr4	+	37689690	37690024	True	NM_001085400,NM_018302,NM_001085399	chr4,chr4,chr4	-,+,-	RELL1,C4orf19,RELL1	-1691,-103895,-1691
chr3:101405609-101405974	chr3	+	101405643	101405809	True	NM_014415,NR_024407,NM_000986	chr3,chr3,chr3	-,+,-	ZBTB11,LOC100009676,RPL24	-9655,-10420,-80
chr16:48774194-48774527	chr16	+	48774275	48774571	True	NM_153029,NM_031490	chr16,chr16	-,+	N4BP1,LONP2	-130155,-496124
chr5:140569172-140569678	chr5	+	140569319	140569721	True	NM_031947,NM_020957,NM_018930,NM_019119,NM_018931	chr5,chr5,chr5,chr5,chr5	-,+,+,+,+	SLC25A2,PCDHB16,PCDHB10,PCDHB9,PCDHB11	113945,-8396,2230,-2483,9626
chr11:28134173-28135015	chr11	+	28134207	28134724	True	NM_031217,NM_152636,NM_001113528	chr11,chr11,chr11	-,+,+	KIF18A,METTL15,METTL15	-4461,-4472,-4472
chr3:52443290-52443700	chr3	+	52443356	52443500	True	NM_004656,NM_173341,NM_016483	chr3,chr3,chr3	-,+,+	BAP1,PHF7,PHF7	559,1026,1026
chr2:102804457-102804764	chr2	+	102804537	102804771	True	NM_003854,NM_032718	chr2,chr2	+,-	IL1RL2,MFSD9	-1155,548618
chr7:158751138-158751544	chr7	+	158751185	158751451	True	NR_024394,NM_020728	chr7,chr7	+,-	LOC154822,ESYT2	49593,-128866
chr7:126862384-126862701	chr7	+	126862467	126862758	True	NM_000845,NM_001662	chr7,chr7	-,+	GRM8,ARF5	20870,365647
chr14:105264135-105264947	chr14	+	105264247	105264963	True	NM_005163,NM_001014432,NM_001014431,NM_001137601	chr14,chr14,chr14,chr14	-,-,-,+	AKT1,AKT1,AKT1,ZBTB42	-4309,-2167,-2167,1969
chr1:167905317-167905962	chr1	+	167905526	167905962	True	NM_001198957,NM_001198956,NM_001143674,NR_026550,NM_018442,NM_001017977,NM_015415	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,-,+,+,-	DCAF6,DCAF6,BRP44,BRP44,DCAF6,DCAF6,BRP44	56,56,395,-87,56,56,395
chr3:140771797-140773662	chr3	+	140771818	140773448	True	NM_001178140,NM_080862	chr3,chr3	-,+	TFDP2,SPSB4	945837,-1126
chr1:100516869-100517515	chr1	+	100517082	100517427	True	NM_033055,NM_194292	chr1,chr1	+,-	HIAT1,SASS6	-13357,81147
chr10:13391569-13391806	chr10	+	13391601	13391820	True	NM_001195604,NM_012247,NM_001195602,NM_182751	chr10,chr10,chr10,chr10	-,-,-,+	SEPHS1,SEPHS1,SEPHS1,MCM10	-1303,-1303,-1303,-188098
chr12:6616711-6617216	chr12	+	6616715	6616875	True	NM_016497,NR_004387	chr12,chr12	-,+	MRPL51,SCARNA10	-14244,2512
chr4:13628749-13628952	chr4	+	13628788	13628850	True	NM_148894,NR_003132	chr4,chr4	-,+	BOD1L,HSP90AB2P	528,-293803
chr2:84686912-84688527	chr2	+	84687081	84688029	True	NM_003849,NM_001370	chr2,chr2	-,+	SUCLG1,DNAH6	-495,55549
chr4:17578070-17578647	chr4	+	17578558	17578646	True	NM_000320,NM_015907	chr4,chr4	-,+	QDPR,LAP3	-64701,280
chr19:49866689-49867041	chr19	+	49866818	49866976	True	NM_014419,NM_003598,NM_001197302,NM_001197301	chr19,chr19,chr19,chr19	+,-,+,+	DKKL1,TEAD2,DKKL1,DKKL1	65,-1104,10,65
chr9:139247092-139247672	chr9	+	139247118	139247580	True	NM_001200003,NM_001145639,NM_001080849	chr9,chr9,chr9	+,+,-	GPSM1,GPSM1,DNLZ	1671,6,10711
chr6:33675457-33676259	chr6	+	33675456	33676297	True	NM_032340,NM_002224	chr6,chr6	-,+	C6orf125,ITPR3	3257,-86355
chr11:57422199-57422660	chr11	+	57422304	57422556	True	NM_145008,NM_006831,NM_001142597	chr11,chr11,chr11	-,+,+	YPEL4,CLP1,CLP1	-4887,2659,2659
chr1:22978023-22978605	chr1	+	22978271	22978579	True	NM_000491,NR_036214,NM_001114101,NM_172369	chr1,chr1,chr1,chr1	+,-,+,+	C1QB,MIR4253,C1QC,C1QC	1102,211190,-8204,-8204
chr4:81105735-81106100	chr4	+	81105756	81106006	True	NM_020226,NM_001145794	chr4,chr4	+,-	PRDM8,ANTXR2	417,-111279
chr11:77777400-77778461	chr11	+	77777549	77778509	True	NM_001203260,NM_003251	chr11,chr11	-,+	NDUFC2-KCTD14,THRSP	12806,-2700
chr4:76034139-76035093	chr4	+	76034231	76034786	True	NM_001729,NM_015393	chr4,chr4	-,+	BTC,PARM1	-314349,-176005
chr9:19027829-19028149	chr9	+	19027900	19028198	True	NM_153707,NM_006570	chr9,chr9	-,+	FAM154A,RRAGA	5108,21173
chr8:101118741-101119689	chr8	+	101118741	101119690	True	NM_015668,NM_005034	chr8,chr8	-,+	RGS22,POLR2K	-397,43148
chr13:99630048-99630460	chr13	+	99630102	99630504	True	NM_001144072,NM_001130050,NM_001130048	chr13,chr13,chr13	+,-,-	UBAC2,DOCK9,DOCK9	222174,-86,-86
chr20:61925389-61925597	chr20	+	61925389	61925629	True	NM_152864,NR_036220,NM_020882	chr20,chr20,chr20	-,+,+	NKAIN4,MIR4326,COL20A1	-39497,-7280,-902
chr7:5092549-5093757	chr7	+	5092862	5093635	True	NM_001204513,NM_021163,NM_001204456,NR_034163	chr7,chr7,chr7,chr7	+,+,+,-	RBAK-LOC389458,RBAK,RBAK,ZNF890P	-7470,-7369,-7470,90593
chr8:38387047-38388629	chr8	+	38387148	38388504	True	NM_207412,NM_001199660	chr8,chr8	-,+	C8orf86,LETM2	-968,-142550
chr19:58976764-58978028	chr19	+	58977182	58977970	True	NM_017908,NM_003433,NM_014347	chr19,chr19,chr19	+,-,+	ZNF446,ZNF132,ZNF324	9824,-25593,441
chr3:159708444-159709148	chr3	+	159708526	159709199	True	NM_000882,NM_001190242	chr3,chr3	+,-	IL12A,IFT80	-1954,392411
chr17:81036173-81036433	chr17	+	81036227	81036305	True	NM_001009905,NM_001004431	chr17,chr17	-,+	B3GNTL1,METRNL	-26541,1261
chr1:59016728-59017594	chr1	+	59016738	59017527	True	NR_034014,NM_145243	chr1,chr1	+,-	LOC100131060,OMA1	233295,-4292
chr15:25100630-25100972	chr15	+	25100957	25101026	True	NM_022805,NM_130838	chr15,chr15	+,-	SNRPN,UBE3A	671,549682
chr1:6052394-6052711	chr1	+	6052513	6052701	True	NM_001199861,NM_015102	chr1,chr1	+,-	KCNAB2,NPHP4	-206,20
chr11:828048-828913	chr11	+	828128	828950	True	NM_001039490,NM_021128,NM_173584,NM_020376,NM_139030,NM_004357,NM_139029	chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,-,+,+,+,+,+	CD151,POLR2L,EFCAB4A,PNPLA2,CD151,CD151,CD151	4001,13629,-594,-9278,4001,4001,4001
chr15:28344280-28344511	chr15	+	28344338	28344464	True	NM_000275,NR_033351	chr15,chr15	-,+	OCA2,GOLGA8F	44,279319
chr12:111284927-111285213	chr12	+	111284989	111285105	True	NM_152591,NM_000432	chr12,chr12	+,-	CCDC63,MYL2	-229,73349
chr11:123401179-123402254	chr11	+	123401468	123402233	True	NM_020716,NM_001040151	chr11,chr11	+,-	GRAMD1B,SCN3B	-4991,123133
chr15:90225981-90227308	chr15	+	90226001	90227262	True	NM_001145311,NM_003847,NM_020212,NM_002666	chr15,chr15,chr15,chr15	-,-,+,-	PLIN1,PEX11A,WDR93,PLIN1	-3353,6747,6765,-3353
chr5:10300768-10301190	chr5	+	10301134	10301203	True	NM_012073,NM_138809	chr5,chr5	+,-	CCT5,CMBL	-50912,7016
chr2:154827273-154828853	chr2	+	154827473	154828871	True	NM_019845,NM_052917	chr2,chr2	-,+	RPRM,GALNT13	-492151,-99105
chr19:39788049-39788762	chr19	+	39788248	39788678	True	NM_172140,NM_020862	chr19,chr19	+,-	IL29,LRFN1	-1334,17348
chr5:140242240-140242840	chr5	+	140242268	140242714	True	NM_031861,NM_031860,NM_002109,NM_031859,NM_018902,NM_018901	chr5,chr5,chr5,chr5,chr5,chr5	+,+,-,+,+,+	PCDHA11,PCDHA10,HARS,PCDHA10,PCDHA11,PCDHA10	5116,-6685,-171297,-6685,5116,-6685
chr1:238027912-238028341	chr1	+	238027952	238028250	True	NR_027247,NM_021186	chr1,chr1	+,-	LOC100130331,ZP4	-2528,26022
chr19:37325066-37326045	chr19	+	37325181	37325700	True	NM_003419,NM_206894	chr19,chr19	+,-	ZNF345,ZNF790	15566,3649
chr3:3097760-3099402	chr3	+	3097825	3099219	True	NM_000564,NM_182916	chr3,chr3	-,+	IL5RA,TRNT1	52895,69380
chr6:16130471-16130879	chr6	+	16130555	16130897	True	NM_013262,NR_036448	chr6,chr6	+,-	MYLIP,DTNBP1	-1297,-467266
chr1:50629218-50630459	chr1	+	50629513	50630421	True	NM_032785,NM_021952	chr1,chr1	-,+	AGBL4,ELAVL4	-139887,-54971
chr19:6334623-6335527	chr19	+	6334720	6335030	True	NM_006012,NM_133492	chr19,chr19	+,-	CLPP,ACER1	26432,-1080
chr8:145672536-145673410	chr8	+	145672684	145673410	True	NM_145754,NM_013432	chr8,chr8	+,-	KIFC2,TONSL	18327,-2872
chr6:58286549-58287475	chr6	+	58286655	58287348	True	NM_000947,NR_003660	chr6,chr6	+,-	PRIM2,GUSBP4	-1104292,426
chr6:58286549-58287475	chr5	-	37380270	37380326	False	NM_153485,NM_018034,NM_004298	chr5,chr5,chr5	-,+,-	NUP155,WDR70,NUP155	-9073,-915,-9383
chr6:58286549-58287475	chr5	-	21459933	21460285	False	NR_027027,NR_027026,NM_004061,NR_027028	chr5,chr5,chr5,chr5	+,+,-,+	GUSBP1,GUSBP1,CDH12,GUSBP1	-395,-395,1393503,-395
chr7:76090306-76090884	chr7	+	76090450	76090887	True	NM_020892,NR_003262,NM_001102594,NM_001102595	chr7,chr7,chr7,chr7	+,-,+,+	DTX2,FDPSL2A,DTX2,DTX2	84,13481,84,84
chr7:76090306-76090884	chr7	+	76588563	76589000	False	NR_023383,NM_006682	chr7,chr7	+,-	PMS2P11,FGL2	21138,240201
chr1:216591142-216592033	chr1	+	216591174	216592043	True	NM_206933,NM_016121,NM_007123	chr1,chr1,chr1	-,+,-	USH2A,KCTD3,USH2A	4746,-850491,4746
chr2:219746972-219747622	chr2	+	219747025	219747599	True	NM_017431,NM_025216	chr2,chr2	-,+	PRKAG3,WNT10A	-50513,-1821
chr7:75507335-75507662	chr7	+	75507418	75507644	True	NM_001040456,NM_001040457,NM_002991	chr7,chr7,chr7	+,+,-	RHBDD2,RHBDD2,CCL24	672,672,-64385
chr7:116594428-116595942	chr7	+	116594546	116595970	True	NR_002329,NR_002330,NM_021908,NM_018412	chr7,chr7,chr7,chr7	+,-,+,+	ST7OT4,ST7OT1,ST7,ST7	-645,-158,-1217,-1217
chr9:43134599-43135055	chr2	+	95524367	95524425	False	NR_003366,NM_144705	chr2,chr2	-,+	ANKRD20A8P,TEKT4	-1547,12806
chr9:43134599-43135055	chr9	+	43134683	43135029	True	NM_001012419,NR_026558,NM_001012421	chr9,chr9,chr9	-,+,-	ANKRD20A3,AQP7P3,ANKRD20A2	-1139,-276582,-1139
chr9:43134599-43135055	chr9	+	44119959	44120361	False	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	-489229,-435477
chr9:43134599-43135055	chr9	-	69380495	69380581	False	NM_001085457,NM_001098805	chr9,chr9	-,+	CBWD6,ANKRD20A4	-117902,1399
chr4:177116462-177116699	chr4	+	177116534	177116694	True	NM_144644,NM_021928	chr4,chr4	-,+	SPATA4,SPCS3	178,124395
chr3:193930494-193930873	chr3	+	193930518	193930913	True	NR_024480,NM_005524	chr3,chr3	-,+	LOC100131551,HES1	99731,-76646
chr4:25540160-25541294	chr4	+	25540177	25541125	True	NM_015187,NM_001177998	chr4,chr4	-,+	SEL1L3,SLC34A2	323537,116309
chr8:67579067-67579349	chr8	+	67579092	67579394	True	NM_019607,NM_001204173,NM_025054	chr8,chr8,chr8	+,+,-	C8orf44,C8orf44-SGK3,VCPIP1	392,392,108
chr1:104200183-104201259	chr1	+	104200216	104201303	True	NM_004038,NM_001008221,NM_001008218,NM_001008219	chr1,chr1,chr1,chr1	+,+,+,+	AMY1A,AMY1A,AMY1B,AMY1C	-1973,-2134,-1950,-1972
chr1:104200183-104201259	chr1	+	104294355	104295442	False	NM_004038,NM_001008221,NM_001008218,NM_001008219	chr1,chr1,chr1,chr1	+,+,+,+	AMY1A,AMY1A,AMY1B,AMY1C	-1974,-2135,-1951,-1973
chr1:104200183-104201259	chr1	-	104235910	104236997	False	NM_004038,NM_001008221,NM_001008218,NM_001008219	chr1,chr1,chr1,chr1	-,-,-,-	AMY1A,AMY1A,AMY1B,AMY1C	1973,2134,1950,1972
chr3:138450747-138452440	chr3	+	138450949	138452449	True	NM_018147,NM_006219	chr3,chr3	+,-	FAIM,PIK3CB	-123094,25793
chr10:49815923-49816772	chr10	+	49815942	49816816	True	NM_020945,NM_021226	chr10,chr10	+,-	WDFY4,ARHGAP22	76701,-2804
chr6:26687257-26687865	chr6	+	26687259	26687860	True	NM_013375,NM_024639	chr6,chr6	+,-	ABT1,ZNF322A	-90130,-27296
chr6:26687257-26687865	chr6	-	58182556	58182668	False	NM_000947,NR_003660	chr6,chr6	+,-	PRIM2,GUSBP4	-1000185,105106
chr1:16762105-16762735	chr1	+	16762247	16762438	True	NM_018090,NM_198546,NM_001145277,NM_001145278	chr1,chr1,chr1,chr1	+,-,+,+	NECAP2,SPATA21,NECAP2,NECAP2	4728,1536,4728,4728
chr15:83102626-83103513	chr15	+	83102711	83102773	True	NR_026811,NM_198181	chr15,chr15	-,+	LOC80154,GOLGA6L9	80178,-4055
chr15:83102626-83103513	chr15	-	82935131	82935193	False	NR_026811,NR_033936,NR_033579	chr15,chr15,chr15	+,+,-	LOC80154,LOC727849,LOC440297	9628,9599,51287
chr15:83102626-83103513	chr15	-	83014134	83014196	False	NM_001164465,NR_024474,NR_004847	chr15,chr15,chr15	-,+,+	GOLGA6L10,UBE2Q2P3,UBE2Q2P2	4055,9576,9576
chr15:83102626-83103513	chr15	-	82637637	82637699	False	NM_001164465,NR_024474,NR_004847	chr15,chr15,chr15	-,+,+	GOLGA6L10,UBE2Q2P3,UBE2Q2P2	4060,9586,9586
chr15:83102626-83103513	chr15	+	82726186	82726248	False	NR_026811,NM_198181	chr15,chr15	-,+	LOC80154,GOLGA6L9	72125,-4055
chr7:100060648-100061737	chr7	+	100061038	100061666	True	NM_001004323,NM_173564	chr7,chr7	-,+	C7orf61,C7orf51	278,19883
chr11:821667-822317	chr11	+	821697	822303	True	NM_145887,NM_020376,NM_173584	chr11,chr11,chr11	-,+,+	LRDD,PNPLA2,EFCAB4A	-16447,-2847,5281
chr1:202857086-202857712	chr1	+	202857175	202857666	True	NM_002871,NR_002929	chr1,chr1	-,+	RABIF,LOC148709	647,-26344
chr2:45167797-45168078	chr2	+	45167852	45168034	True	NM_005413,NM_016932	chr2,chr2	+,-	SIX3,SIX2	1002,68564
chr4:16084528-16084791	chr4	+	16084604	16084774	True	NM_001145849,NM_001145848,NM_001145847,NM_001145850,NM_001145851,NM_001145852,NM_006017,NR_027696	chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4	-,-,-,-,-,-,-,+	PROM1,PROM1,PROM1,PROM1,PROM1,PROM1,PROM1,FLJ39653	-6863,899,870,-6863,-6863,-6863,-6863,143511
chr11:44066532-44067216	chr11	+	44066565	44067163	True	NM_001031854,NM_021926	chr11,chr11	+,-	ACCSL,ALX4	2367,264603
chr1:4716451-4717016	chr1	+	4716688	4716944	True	NM_018836,NM_001042478,NM_207356	chr1,chr1,chr1	+,+,-	AJAP1,AJAP1,C1orf174	-1634,-1634,-899831
chr14:74765953-74766484	chr14	+	74766053	74766316	True	NR_003256,NM_018228,NM_005050	chr14,chr14,chr14	-,+,-	ABCD4,VRTN,ABCD4	3502,48849,3502
chr11:18476110-18476441	chr11	+	18476282	18476351	True	NM_144972,NM_001144071,NM_006292	chr11,chr11,chr11	+,+,-	LDHAL6A,LDHAL6A,TSG101	1022,1022,72193
chr14:45366274-45366631	chr14	+	45366336	45366531	True	NM_017658,NM_001017923	chr14,chr14	-,+	KLHL28,C14orf28	64698,-19
chr5:39424388-39424904	chr5	+	39424414	39424940	True	NM_001343,NM_003999	chr5,chr5	-,+	DAB2,OSMR	445,-578364
chr19:51540374-51541108	chr19	+	51540940	51541050	True	NM_145894,NM_145895,NM_019598,NM_001167605,NM_006853,NM_014441	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,+	KLK12,KLK12,KLK12,KLK11,KLK11,SIGLEC9	-2792,-2792,-2792,-9650,-9650,87086
chr9:117256378-117257553	chr9	+	117256473	117257583	True	NM_001083885,NM_004888	chr9,chr9	-,+	DFNB31,ATP6V1G1	7962,92410
chr11:118271749-118272084	chr11	+	118271884	118272112	True	NR_033759,NM_001040651,NM_006476	chr11,chr11,chr11	+,-,+	ATP5L,CD3D,ATP5L	-9,-58425,-9
chr22:31504849-31505606	chr22	+	31505554	31505622	True	NM_080430,NM_001002837	chr22,chr22	-,+	SELM,INPP5J	-2003,13338
chr4:148541738-148543251	chr4	+	148541782	148543051	True	NM_018241,NM_138364	chr4,chr4	+,-	TMEM184C,PRMT10	-3295,62292
chr1:201947398-201948560	chr1	+	201947516	201948366	True	NM_020216,NM_012134	chr1,chr1	+,-	RNPEP,LMOD1	3399,-31800
chr10:122889662-122891590	chr10	+	122889765	122891625	True	NM_018117,NR_033850	chr10,chr10	+,-	WDR11,LOC283089	-279129,-279074
chr2:24398412-24398662	chr2	+	24398423	24398623	True	NM_001040710,NM_199346	chr2,chr2	+,-	C2orf84,PFN4	-504,-52272
chr16:21432593-21433558	chr16	+	21432800	21432984	True	NR_026675,NM_130464	chr16,chr16	+,-	NCRNA00169,NPIPL3	-120681,3724
chr16:21432593-21433558	chr16	+	21865078	21865262	False	NM_003366,NR_003370	chr16,chr16	+,-	UQCRC2,RRN3P1	99346,-34583
chr16:21432593-21433558	chr16	-	22528565	22528749	False	NM_001135865,NR_027460	chr16,chr16	+,-	LOC100132247,RRN3P3	-3772,-79529
chr16:21432593-21433558	chr16	+	29513305	29513489	False	NR_002557,NM_177552	chr16,chr16	-,+	LOC613038,SULT1A3	-34406,-42149
chr16:21432593-21433558	chr16	+	30253274	30253458	False	NR_002555,NM_177552	chr16,chr16	-,+	LOC613037,SULT1A3	3524,-42776
chr15:41806232-41806859	chr15	+	41806388	41806868	True	NM_002220,NM_206961,NM_002344,NM_001135685	chr15,chr15,chr15,chr15	+,-,-,-	ITPKA,LTK,LTK,LTK	-20317,-303,-303,-303
chr8:109093656-109094030	chr8	+	109093656	109094024	True	NM_178565,NM_014673	chr8,chr8	-,+	RSPO2,TTC35	1939,361828
chr12:62577323-62578488	chr12	+	62577716	62578267	True	NM_178539,NM_006313	chr12,chr12	-,+	FAM19A2,USP15	8335,75919
chr13:25541581-25542367	chr13	+	25541927	25542415	True	NR_026730,NM_030979	chr13,chr13	-,+	TPTE2P1,PABPC3	242,127860
chr13:25541581-25542367	chr13	-	25155373	25155452	False	NM_006437,NR_002815	chr13,chr13	-,+	PARP4,LOC374491	-68425,-1095
chr21:40817911-40819027	chr21	+	40817998	40819045	True	NM_152505,NM_007341,NM_001001713	chr21,chr21,chr21	-,+,+	LCA5L,SH3BGR,SH3BGR	-1870,4734,-252
chr11:122527412-122527714	chr11	+	122527443	122527749	True	NM_032873,NM_001098169	chr11,chr11	+,-	UBASH3B,BSX	-1096,324680
chr5:126626847-126627059	chr5	+	126626867	126627095	True	NM_032446,NM_001164478	chr5,chr5	+,-	MEGF10,FLJ44606	-462,-217683
chr19:17829970-17830222	chr19	+	17829969	17830131	True	NM_001080421,NM_018174	chr19,chr19	-,+	UNC13A,MAP1S	-30961,171
chr17:40537449-40538124	chr17	+	40537551	40538032	True	NM_001130020,NM_213662,NM_003150,NM_139276	chr17,chr17,chr17,chr17	+,-,-,-	ATP6V0A1,STAT3,STAT3,STAT3	72829,2432,2540,2540
chr19:52489888-52491669	chr19	+	52489912	52491448	True	NM_024840,NM_021632	chr19,chr19	+,-	ZNF613,ZNF350	-59275,43
chr2:224702269-224702545	chr2	+	224702268	224702592	True	NM_022915,NM_001039569	chr2,chr2	+,-	MRPL44,AP1S3	119528,25
chr20:31363957-31365609	chr20	+	31364137	31365520	True	NM_175850,NM_053041	chr20,chr20	+,-	DNMT3B,COMMD7	2137,-32323
chr1:210002208-210002524	chr1	+	210002455	210002584	True	NM_006147,NM_014388	chr1,chr1	-,+	IRF6,DIEXF	-22976,-1207
chr19:3933763-3934168	chr19	+	3933771	3933847	True	NM_170678,NR_030367	chr19,chr19	+,-	ITGB1BP3,MIR637	-721,27713
chr11:82865740-82866711	chr11	+	82865756	82866474	True	NM_015885,NM_014488	chr11,chr11	+,-	PCF11,RAB30	1662,-82872
chr13:50367137-50367649	chr13	+	50367455	50367633	True	NM_002267,NR_003268	chr13,chr13	-,+	KPNA3,CTAGE10P	-398,96911
chr1:155148481-155149222	chr1	+	155148802	155149213	True	NM_025058,NM_173852	chr1,chr1	+,-	TRIM46,KRTCAP2	-2495,-2998
chr17:62323339-62324988	chr17	+	62323362	62325027	True	NM_018469,NR_002995	chr17,chr17	-,+	TEX2,SNORA76	15676,-99714
chr11:12324595-12326036	chr11	+	12324778	12325873	True	NM_013253,NM_032867	chr11,chr11	-,+	DKK3,MICALCL	-293861,-16388
chr3:109057895-109058905	chr3	+	109058107	109058946	True	NM_018189,NM_001145553	chr3,chr3	-,+	DPPA4,FLJ25363	-1688,69890
chr15:89631146-89631407	chr15	+	89631171	89631451	True	NM_007011,NM_152924,NM_000326	chr15,chr15,chr15	+,+,-	ABHD2,ABHD2,RLBP1	37,37,133521
chr21:34443400-34443726	chr21	+	34443436	34443652	True	NR_024102,NM_138983	chr21,chr21	-,+	C21orf54,OLIG1	98939,-1037
chr15:72614756-72615300	chr15	+	72614996	72615218	True	NM_052840,NR_027262,NM_001172684	chr15,chr15,chr15	-,+,-	CELF6,C15orf34,CELF6	-2471,53235,-2709
chr2:128147054-128148229	chr2	+	128147069	128148287	True	NM_000312,NM_006609	chr2,chr2	+,-	PROC,MAP3K2	27708,-46299
chr1:65897978-65899423	chr1	+	65898023	65899262	True	NR_029516,NM_001198681	chr1,chr1	-,+	MIR101-1,LEPROT	-373832,-11675
chr16:69374295-69374509	chr16	+	69374362	69374478	True	NM_001199434,NM_022341,NM_032382,NM_016101	chr16,chr16,chr16,chr16	+,-,-,+	NIP7,PDF,COG8,NIP7	-998,-9864,-836,-998
chr19:18529168-18529386	chr19	+	18529320	18529402	True	NM_032627,NM_001170939,NM_001009998	chr19,chr19,chr19	+,-,+	SSBP4,ISYNA1,SSBP4	743,19569,743
chr19:52956842-52957242	chr19	+	52956926	52957090	True	NM_001099694,NM_001105549	chr19,chr19	+,-	ZNF578,ZNF83	-148,184604
chr9:99775681-99775885	chr9	+	99775794	99775868	True	NM_001045477,NR_002894	chr9,chr9	+,-	FAM22G,HIATL2	-84559,44
chr9:99775681-99775885	chr9	-	97136893	97136943	False	NM_017561,NM_032558	chr9,chr9	-,+	FAM22F,HIATL1	-45967,-111
chr16:80838782-80840085	chr16	+	80839120	80839938	True	NM_152342,NM_018455	chr16,chr16	-,+	CDYL2,CENPN	-945,200164
chr8:67417774-67419719	chr8	+	67417961	67419751	True	NM_001080416,NM_152765	chr8,chr8	-,+	MYBL1,C8orf46	105779,-12528
chr9:86568705-86569419	chr9	+	86568707	86569181	True	NM_024945,NM_032307	chr9,chr9	+,-	RMI1,C9orf64	26455,2538
chr3:52348949-52350243	chr3	+	52348979	52350285	True	NM_015512,NR_029677	chr3,chr3	+,-	DNAH1,MIR135A1	49,-20655
chr19:45447915-45448411	chr19	+	45447959	45448415	True	NM_001646,NM_145288,NR_037932,NM_000483	chr19,chr19,chr19,chr19	+,-,+,+	APOC4,ZNF296,APOC4-APOC2,APOC2	-2515,131323,-2515,823
chr21:34773759-34774338	chr21	+	34774078	34774210	True	NM_005534,NM_006134	chr21,chr21	+,-	IFNGR2,TMEM50B	991,78127
chr11:67374345-67374585	chr11	+	67374358	67374552	True	NM_007103,NR_033791,NM_001166102	chr11,chr11,chr11	+,-,+	NDUFV1,DOC2GP,NDUFV1	-86,8633,-86
chr4:17506021-17506961	chr4	+	17506120	17506812	True	NM_000320,NM_001079827	chr4,chr4	-,+	QDPR,CLRN2	7095,9975
chr19:56418910-56420559	chr19	+	56418995	56420556	True	NM_176810,NM_176811	chr19,chr19	-,+	NLRP13,NLRP8	23196,38641
chr4:187680154-187680722	chr4	+	187680270	187680676	True	NM_000128,NM_005245	chr4,chr4	+,-	F11,FAT1	-493204,-35283
chr14:74320319-74320927	chr14	+	74320398	74320742	True	NM_152444,NM_001146154,NM_001146155,NM_001043318	chr14,chr14,chr14,chr14	+,+,+,-	PTGR2,PTGR2,PTGR2,C14orf43	-1828,-1915,-1902,-66502
chr8:52704438-52704979	chr8	+	52704437	52704962	True	NM_144651,NM_005285	chr8,chr8	-,+	PXDNL,NPBWR1	17093,1147505
chr2:235404930-235405134	chr2	+	235404943	235405155	True	NM_006944,NM_005737	chr2,chr2	+,-	SPP2,ARL4C	-445648,588
chr1:43251671-43252362	chr1	+	43251717	43252389	True	NM_024097,NM_022356	chr1,chr1	+,-	C1orf50,LEPRE1	-18852,-18962
chr5:177632482-177633139	chr5	+	177632485	177633163	True	NR_003281,NM_031266,NM_004499	chr5,chr5,chr5	-,+,+	GMCL1L,HNRNPAB,HNRNPAB	-18052,-1028,-1028
chrY:14504396-14505064	chrY	+	14504433	14505031	True	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	269266,28411
chr12:108911757-108912009	chr12	+	108911770	108912054	True	NM_007076,NM_014706	chr12,chr12	+,-	FICD,SART3	-2770,43161
chr13:90881123-90882765	chr13	+	90881197	90882299	True	NR_030754,NR_027039	chr13,chr13	+,-	MIR622,LOC144776	1136,696612
chr8:27343295-27344292	chr8	+	27343408	27344316	True	NM_001979,NM_000742	chr8,chr8	+,-	EPHX2,CHRNA2	4328,-6595
chr17:30436887-30437794	chr17	+	30437319	30437831	True	NM_001033566,NR_002222	chr17,chr17	+,-	RHOT1,ARGFXP2	31641,40809
chr10:124316841-124317360	chr10	+	124316895	124317293	True	NM_017579,NM_001010912,NM_004406,NM_007329	chr10,chr10,chr10,chr10	+,-,+,+	DMBT1,C10orf120,DMBT1,DMBT1	2887,142095,2887,2887
chr19:12622650-12623775	chr19	+	12622909	12623547	True	NM_152601,NM_153358	chr19,chr19	-,+	ZNF709,ZNF791	-27277,98184
chr2:169935650-169936218	chr2	+	169935708	169936090	True	NM_001142271,NM_001142270,NM_003742	chr2,chr2,chr2	+,+,-	DHRS9,DHRS9,ABCB11	1526,-6680,-47875
chr19:34013031-34014237	chr19	+	34013162	34014080	True	NM_001166057,NM_000285,NM_001166056,NM_001127895	chr19,chr19,chr19,chr19	-,-,-,+	PEPD,PEPD,PEPD,CHST8	-363,-363,-363,98780
chr15:20745031-20746224	chr15	+	20745225	20746047	True	NR_027411,NM_001145004	chr15,chr15	+,-	GOLGA8C,GOLGA6L6	21626,1117
chr15:20745031-20746224	chr15	+	23413094	23413144	False	NR_002824,NR_033350	chr15,chr15	-,+	HERC2P2,GOLGA8E	-34835,21925
chr19:18335566-18335836	chr19	+	18335811	18335879	True	NM_001098819,NM_001098818,NM_032683	chr19,chr19,chr19	-,-,+	PDE4C,PDE4C,MPV17L2	-508,1419,-31822
chr2:23693705-23693962	chr2	+	23693704	23693996	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	455988,-85457
chr22:25383296-25384759	chr22	+	25383713	25384768	True	NM_001001663,NM_001145206	chr22,chr22	-,+	TMEM211,KIAA1671	-48399,39172
chr4:185128438-185128784	chr4	+	185128465	185128799	True	NM_020225,NM_153343	chr4,chr4	+,-	STOX2,ENPP6	-302015,10365
chr17:54928684-54929628	chr17	+	54928683	54929109	True	NR_027025,NM_003647	chr17,chr17	-,+	MTVR2,DGKE	33215,-17277
chr15:78932765-78932986	chr15	+	78932766	78933032	True	NM_000745,NM_000750	chr15,chr15	+,-	CHRNA5,CHRNB4	-74955,605
chr12:21697670-21698096	chr12	+	21697752	21698031	True	NM_030572,NM_032941	chr12,chr12	+,-	C12orf39,RECQL	-18560,-43149
chr9:123878757-123880179	chr9	+	123878921	123879884	True	NM_007018,NM_001735	chr9,chr9	+,-	CEP110,C5	-28405,-66367
chr1:175013056-175013846	chr1	+	175013056	175013866	True	NR_037606,NM_022093	chr1,chr1	-,+	MRPS14,TNN	-20465,23127
chr18:74172752-74172992	chr18	+	74172758	74172867	True	NR_015417,NM_014643	chr18,chr18	+,-	LOC284276,ZNF516	67744,34330
chr15:69370627-69371090	chr15	+	69370789	69370885	True	NR_026949,NM_006305	chr15,chr15	+,-	NCRNA00277,ANP32A	2304,-257528
chr5:177091115-177091535	chr5	+	177091226	177091336	True	NR_026921,NM_007255	chr5,chr5	-,+	LOC202181,B4GALT7	7992,-64169
chr5:177091115-177091535	chr5	-	175673314	175673418	False	NR_036494,NM_198567	chr5,chr5	-,+	LOC643201,C5orf25	-47016,-8005
chr11:20182931-20183205	chr11	+	20182975	20183180	True	NM_001111019,NM_001029865	chr11,chr11	+,-	NAV2,DBX1	-138390,-1105
chr10:15870324-15871288	chr10	+	15870382	15871317	True	NM_024948,NM_001001484	chr10,chr10	-,+	FAM188A,PTER	31252,607649
chrX:9001293-9001518	chrX	+	9001327	9001405	True	NM_001139466,NM_205849	chrX,chrX	+,-	TBL1X,FAM9B	429929,-211
chr4:95238524-95240075	chr4	+	95238540	95239855	True	NM_020159,NM_014485	chr4,chr4	+,-	SMARCAD1,HPGDS	-109575,24222
chr15:23890241-23890548	chr15	+	23890249	23890569	True	NM_005664,NM_019066	chr15,chr15	+,-	MKRN3,MAGEL2	-79846,2474
chr3:53926171-53927375	chr3	+	53926243	53927149	True	NM_018725,NM_021237	chr3,chr3	+,-	IL17RB,SELK	-45720,-254
chr8:80548239-80548630	chr8	+	80548515	80548663	True	NM_001040708,NM_007029	chr8,chr8	-,+	HEY1,STMN2	131485,-25530
chr10:101493677-101493985	chr10	+	101493706	101493824	True	NM_015960,NM_078470,NM_004376	chr10,chr10,chr10	+,-,-	CUTC,COX15,COX15	-1800,-1283,-1283
chr16:31127692-31128092	chr16	+	31127811	31127887	True	NM_002773,NM_001122957,NM_032188,NM_182958,NM_005881	chr16,chr16,chr16,chr16,chr16	-,+,+,+,+	PRSS8,BCKDK,MYST1,MYST1,BCKDK	19314,-8200,1097,1097,-8200
chr3:184057541-184058199	chr3	+	184057557	184057780	True	NM_144635,NM_001171087,NM_001171093	chr3,chr3,chr3	+,-,+	FAM131A,CLCN2,FAM131A	-2332,21672,-3891
chr7:150688009-150688938	chr7	+	150688082	150688706	True	NM_172056,NM_001160110,NM_001160109,NM_000603,NM_001160111	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	KCNH2,NOS3,NOS3,NOS3,NOS3	-12680,2185,2185,11,2185
chr9:77696175-77696593	chr9	+	77696395	77696631	True	NM_012383,NM_017881,NR_023352,NM_001127603	chr9,chr9,chr9,chr9	+,-,-,-	OSTF1,C9orf95,C9orf95,C9orf95	6766,6552,6552,6552
chr3:58222158-58222709	chr3	+	58222161	58222727	True	NM_020676,NM_004944	chr3,chr3	+,-	ABHD6,DNASE1L3	531,-21763
chr10:43953392-43953758	chr10	+	43953528	43953716	True	NR_026693,NM_001098204	chr10,chr10	+,-	ZNF487P,HNRNPF	-21012,-48832
chr21:46845569-46845799	chr21	+	46845699	46845815	True	NM_130445,NR_028082,NR_027498	chr21,chr21,chr21	+,-,-	COL18A1,NCRNA00175,NCRNA00175	-20653,-744,-714
chr12:54720216-54721064	chr12	+	54720216	54720534	True	NM_016057,NM_001136023	chr12,chr12	+,-	COPZ1,NFE2	-1356,-25425
chrX:122993096-122993607	chrX	+	122993209	122993529	True	NM_001204401,NM_001167,NR_037916,NM_001081550	chrX,chrX,chrX,chrX	+,+,+,-	XIAP,XIAP,XIAP,THOC2	132,487,487,-126305
chr15:65357970-65358993	chr15	+	65358042	65359024	True	NM_016563,NM_001101362	chr15,chr15	-,+	RASL12,KBTBD13	1414,10129
chrX:148690363-148691348	chrX	+	148690406	148691279	True	NM_001171909,NM_001164415	chrX,chrX	+,-	CXorf40A,HSFX2	-64392,-13432
chr6:123883200-123885108	chr6	+	123883498	123884491	True	NM_001040214,NM_006073	chr6,chr6	+,-	NKAIN2,TRDN	240577,73510
chr12:7940625-7941697	chr12	+	7940680	7941400	True	NM_024865,NM_203503	chr12,chr12	+,-	NANOG,CLEC4C	594,-38611
chr19:57093340-57094526	chr19	+	57093339	57094582	True	NM_021216,NM_001005850	chr19,chr19	+,-	ZNF71,ZNF835	12081,89721
chr1:47181092-47182507	chr1	+	47181179	47182425	True	NM_014774,NM_001145474	chr1,chr1	-,+	KIAA0494,C1orf223	2361,-43730
chr12:41863019-41863586	chr12	+	41863139	41863436	True	NM_001099650,NM_013377	chr12,chr12	-,+	GXYLT1,PDZRN4	675287,-31657
chr14:68062565-68062936	chr14	+	68062568	68062708	True	NM_001172,NM_004569	chr14,chr14	+,-	ARG2,PIGH	23870,4367
chr3:129163888-129165158	chr3	+	129164412	129164997	True	NM_052985,NM_052989,NM_018262,NM_003925,NM_052990	chr3,chr3,chr3,chr3,chr3	+,+,+,-,+	IFT122,IFT122,IFT122,MBD4,IFT122	-5503,-5503,-5503,-5560,-5503
chr15:28983131-28983341	chr15	+	28983194	28983276	True	NR_033351,NR_026589	chr15,chr15	-,+	GOLGA8F,WHAMML2	-205051,-516
chr17:37380567-37381038	chr17	+	37380670	37380940	True	NM_198993,NM_000981	chr17,chr17	-,+	STAC2,RPL19	1158,-24185
chr10:8334849-8336074	chr10	+	8335118	8336106	True	NM_002051,NR_024256	chr10,chr10	+,-	GATA3,FLJ45983	-238505,-239671
chr17:6612042-6612747	chr17	+	6612132	6612571	True	NM_177550,NM_001143838,NM_017523	chr17,chr17,chr17	-,-,+	SLC13A5,SLC13A5,XAF1	4229,4229,46584
chr1:44446146-44446598	chr1	+	44446254	44446636	True	NM_003780,NM_004047,NM_001005417,NM_006934,NM_001039457	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	B4GALT2,ATP6V0B,B4GALT2,SLC6A9,ATP6V0B	-1439,-5703,-122,36411,-5703
chr19:2974035-2974702	chr19	+	2974253	2974667	True	NM_021217,NM_001143986,NM_024760	chr19,chr19,chr19	-,+,+	ZNF77,TLE6,TLE6	-29284,2868,2868
chr17:61849296-61849704	chr17	+	61849469	61849613	True	NM_203499,NM_007372,NM_020198	chr17,chr17,chr17	+,+,-	DDX42,DDX42,CCDC47	1953,1953,1525
chrX:68050475-68051044	chrX	+	68050479	68050996	True	NM_001032396,NM_004429	chrX,chrX	-,+	PJA1,EFNB1	334420,-1690
chr16:75034618-75035346	chr16	+	75034697	75035378	True	NM_030581,NM_032268	chr16,chr16	-,+	WDR59,ZNRF1	-15680,-1833
chr16:3625559-3625771	chr16	+	3625591	3625783	True	NM_024793,NM_178844	chr16,chr16	+,-	CLUAP1,NLRC3	-65748,1659
chr14:100151870-100153362	chr14	+	100152031	100153343	True	NM_001144995,NM_006668	chr14,chr14	-,+	CCDC85C,CYP46A1	-81304,-1327
chr19:54959092-54959355	chr19	+	54959210	54959386	True	NM_198988,NM_052925	chr19,chr19	-,+	LENG9,LENG8	15558,678
chr2:180870024-180871319	chr2	+	180870407	180871359	True	NM_182678,NM_020943	chr2,chr2	+,-	UBE2E3,CWC22	973752,479
chr3:49168769-49169805	chr3	+	49168973	49169799	True	NM_173546,NM_002292	chr3,chr3	+,-	KLHDC8B,LAMB2	39218,850
chr10:71392710-71393401	chr10	+	71392738	71393426	True	NM_020999,NM_145306	chr10,chr10	-,+	NEUROG3,C10orf35	-59528,-2786
chr19:48973655-48973877	chr19	+	48973680	48973916	True	NM_017457,NM_004228,NM_001080434,NM_170720	chr19,chr19,chr19,chr19	+,+,-,+	CYTH2,CYTH2,LMTK3,KCNJ14	-1266,-1266,42580,-9225
chr1:23572590-23573413	chr1	+	23572854	23573435	True	NR_033690,NM_000864	chr1,chr1	+,-	C1orf213,HTR1D	122028,-51632
chr4:2471564-2472815	chr4	+	2471662	2472616	True	NM_001172657,NM_001185010,NM_002938,NM_001185009	chr4,chr4,chr4,chr4	-,+,+,+	ZFYVE28,RNF4,RNF4,RNF4	-51292,-918,-918,-533
chr22:39026793-39027734	chr22	+	39026831	39027601	True	NM_001002880,NM_001013647	chr22,chr22	+,-	CBY1,LOC646851	25056,25083
chr16:88221139-88221581	chr16	+	88221241	88221487	True	NM_001173543,NM_001739	chr16,chr16	+,-	BANP,CA5A	-217674,-251129
chr16:88221139-88221581	chr16	+	29233228	29233278	False	NR_002939,NM_001031827	chr16,chr16	+,-	RUNDC2C,BOLA2	69262,233057
chr5:78985868-78986289	chr5	+	78985977	78986231	True	NM_004272,NM_153610	chr5,chr5	-,+	HOMER1,CMYA5	-176277,-369
chr19:2703445-2705067	chr19	+	2703729	2704589	True	NM_003249,NM_052847	chr19,chr19	+,-	THOP1,GNG7	80916,-983
chr17:79860416-79860626	chr17	+	79860547	79860639	True	NM_002861,NM_148896,NM_001184917,NR_033682,NR_033683,NR_033681,NR_033685	chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,-,-,-,-,-	PCYT2,NPB,PCYT2,PCYT2,PCYT2,PCYT2,PCYT2	8751,-526,8751,8751,8488,8751,8488
chr18:66381731-66381961	chr18	+	66381747	66381877	True	NM_019022,NM_001093729	chr18,chr18	-,+	TMX3,CCDC102B	526,613
chr16:29828354-29828596	chr16	+	29828507	29828603	True	NM_006319,NM_024516,NM_017458,NM_145239,NM_005115	chr16,chr16,chr16,chr16,chr16	-,+,+,+,+	CDIPT,C16orf53,MVP,PRRT2,MVP	46025,-1031,3111,-5150,3111
chr21:40822523-40823039	chr21	+	40822582	40822962	True	NM_152505,NM_007341,NM_001001713	chr21,chr21,chr21	-,+,+	LCA5L,SH3BGR,SH3BGR	-6454,817,-4836
chr17:73203523-73204141	chr17	+	73204127	73204193	True	NM_001005849,NM_024844	chr17,chr17	-,+	SUMO2,NUP85	-25029,-2581
chr7:149413814-149414147	chr7	+	149413871	149414107	True	NM_207336,NM_032534	chr7,chr7	-,+	ZNF467,KRBA1	56238,-1774
chr6:74017070-74017716	chr6	+	74017204	74017558	True	NM_001017361,NR_027005	chr6,chr6	+,-	C6orf221,C6orf147	54841,2580
chr5:140763698-140764158	chr5	+	140763706	140764078	True	NM_032087,NM_003736,NM_032098,NM_032088,NM_005642,NM_014004,NM_018920	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,-,+,+	PCDHGA7,PCDHGB4,PCDHGB4,PCDHGA8,TAF7,PCDHGA8,PCDHGA7	-1290,3373,3373,7404,-63355,7404,-1290
chr9:131873935-131874284	chr9	+	131873963	131874253	True	NM_178003,NM_178001,NM_178000,NM_021131,NR_028048,NM_001193397,NM_000755	chr9,chr9,chr9,chr9,chr9,chr9,chr9	+,+,+,+,-,+,-	PPP2R4,PPP2R4,PPP2R4,PPP2R4,CRAT,PPP2R4,CRAT	-421,-421,-421,-786,-893,-47,-893
chr12:107487839-107488173	chr12	+	107487914	107488222	True	NM_004075,NM_152261	chr12,chr12	-,+	CRY1,C12orf23	-316,-138421
chr15:66589153-66590439	chr15	+	66589155	66590255	True	NM_133375,NM_001143688,NM_032445	chr15,chr15,chr15	+,+,-	DIS3L,DIS3L,MEGF11	-3573,-3286,-43080
chr16:89575323-89575749	chr16	+	89575335	89575661	True	NM_199367,NM_003119,NM_013275	chr16,chr16,chr16	+,+,-	SPG7,SPG7,ANKRD11	-581,-581,-18366
chrX:153609409-153609961	chrX	+	153609476	153609996	True	NM_001110556,NM_000117,NM_001456	chrX,chrX,chrX	-,+,-	FLNA,EMD,FLNA	-6470,-1930,-6470
chrX:103500682-103500954	chrX	+	103500795	103500895	True	NM_153448,NM_207318	chrX,chrX	-,+	ESX1,FAM199X	-1196,-89552
chr8:29953308-29953544	chr8	+	29953314	29953490	True	NM_001128208,NM_016127,NM_015344	chr8,chr8,chr8	+,-,+	LEPROTL1,TMEM66,LEPROTL1	-443,-12665,-443
chr10:103816030-103816655	chr10	+	103816054	103816360	True	NM_024747,NM_024541	chr10,chr10	+,-	HPS6,C10orf76	8763,-122
chr20:31441773-31443219	chr20	+	31442050	31443237	True	NM_012325,NM_053041	chr20,chr20	+,-	MAPRE1,COMMD7	-34402,-110236
chr16:67758203-67758746	chr16	+	67758315	67758781	True	NR_027399,NR_027398,NM_030819,NM_001012984	chr16,chr16,chr16,chr16	-,-,-,+	GFOD2,GFOD2,GFOD2,C16orf86	-5042,-5042,-5042,-57656
chr1:160286394-160287122	chr1	+	160286550	160287096	True	NM_001098398,NR_002190	chr1,chr1	-,+	COPA,SUMO1P3	26308,9
chr10:91091709-91092338	chr10	+	91092006	91092305	True	NM_001549,NM_000235,NM_001031683	chr10,chr10,chr10	+,-,+	IFIT3,LIPA,IFIT3	-4461,-80346,-13
chr11:45685390-45685819	chr11	+	45685402	45685786	True	NR_027134,NM_003654	chr11,chr11	+,-	DKFZp779M0652,CHST1	107196,1436
chr1:36403013-36403878	chr1	+	36403302	36403505	True	NM_024852,NM_005202,NM_177422	chr1,chr1,chr1	+,-,+	EIF2C3,COL8A2,EIF2C3	-6670,162404,-6670
chr1:32929436-32929924	chr1	+	32929732	32929956	True	NM_001145720,NM_018045	chr1,chr1	+,-	ZBTB8B,BSDC1	701,-69670
chr4:39185162-39185884	chr4	+	39185202	39185710	True	NM_025132,NM_024943	chr4,chr4	+,-	WDR19,TMEM156	-1237,-151161
chr11:45824645-45824980	chr11	+	45824728	45824892	True	NM_018389,NM_001145266,NM_001145265,NM_001080446	chr11,chr11,chr11,chr11	+,+,+,-	SLC35C1,SLC35C1,SLC35C1,C11orf94	1748,730,730,104001
chr21:16435605-16436425	chr21	+	16435623	16436328	True	NM_003489,NM_013396	chr21,chr21	-,+	NRIP1,USP25	850,666167
chr10:75402543-75403579	chr10	+	75402671	75403467	True	NM_021245,NM_024875,NM_004922	chr10,chr10,chr10	-,-,+	MYOZ1,SYNPO2L,SEC24C	-1156,7370,100663
chr4:152196397-152197085	chr4	+	152196530	152196774	True	NM_183375,NM_001128923	chr4,chr4	+,-	PRSS48,SH3D19	1550,-48870
chr6:41029412-41031181	chr6	+	41029560	41031031	True	NM_021705,NM_145063,NM_002505,NM_006789	chr6,chr6,chr6,chr6	+,-,+,+	NFYA,C6orf130,NFYA,APOBEC2	9675,9214,9675,-8671
chr10:6352200-6353634	chr10	+	6352296	6353418	True	NM_004566,NM_000417	chr10,chr10	+,-	PFKFB3,IL2RA	-107508,-247963
chr16:56967136-56967755	chr16	+	56967147	56967803	True	NM_001010990,NM_001010989,NM_014685,NM_024946	chr16,chr16,chr16,chr16	+,+,+,-	HERPUD1,HERPUD1,HERPUD1,FAM192A	-1450,-1450,-1450,252227
chr9:44021507-44021889	chr9	+	44021601	44021799	True	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	-390871,-336767
chr9:44021507-44021889	chr9	+	66369038	66369236	False	NR_024443,NR_024496	chr9,chr9	-,+	LOC100133920,LOC442421	661796,125032
chr19:39737402-39737692	chr19	+	39737580	39737738	True	NM_172139,NM_172138	chr19,chr19	-,+	IL28B,IL28A	-1969,21418
chr19:39737402-39737692	chr19	-	39756599	39756649	False	NM_172139,NM_172138	chr19,chr19	-,+	IL28B,IL28A	-20988,2507
chr1:205738850-205739198	chr1	+	205738991	205739243	True	NM_003929,NM_001135662,NM_001135663,NM_001135664,NM_181644	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	RAB7L1,RAB7L1,RAB7L1,RAB7L1,MFSD4	5417,5417,5417,5417,-200940
chr2:68279033-68280215	chr2	+	68279063	68280109	True	NM_001190263,NM_020143	chr2,chr2	-,+	C1D,PNO1	10100,104895
chr14:103775791-103776188	chr14	+	103775830	103775992	True	NR_033938,NM_001969	chr14,chr14	-,+	LOC100131366,EIF5	-120465,24500
chr1:114408020-114409055	chr1	+	114408071	114408785	True	NM_012411,NR_037864,NM_001193431,NM_015967	chr1,chr1,chr1,chr1	-,+,-,-	PTPN22,LOC100287722,PTPN22,PTPN22	5650,-8867,5650,5650
chrY:9640679-9642553	chrY	+	9640792	9642506	True	NR_001539,NR_003589	chrY,chrY	+,-	TTTY22,TTTY1B	-2081,-28864
chr5:157178151-157179431	chr5	+	157178165	157179137	True	NM_173491,NM_178424	chr5,chr5	+,-	LSM11,SOX30	-7475,-98737
chr16:67919289-67919760	chr16	+	67919652	67919714	True	NM_006742,NM_025082,NM_198443	chr16,chr16,chr16	+,-,+	PSKH1,CENPT,NRN1L	7460,-38291,-922
chr2:242641361-242641586	chr2	+	242641363	242641527	True	NR_033255,NM_032329	chr2,chr2	-,+	DTYMK,ING5	-14980,42
chr19:55172513-55173107	chr19	+	55172615	55172997	True	NM_006847,NM_001081438,NM_145057	chr19,chr19,chr19	+,+,-	LILRB4,LILRB4,CDC42EP5	1126,1126,-188193
chr15:38758624-38759340	chr15	+	38758623	38759398	True	NM_001128602,NM_173611	chr15,chr15	-,+	RASGRP1,FAM98B	97669,-12359
chr10:124761958-124762705	chr10	+	124762380	124762477	True	NM_001609,NM_022466	chr10,chr10	+,-	ACADSB,IKZF5	5951,5897
chr1:187295729-187297105	chr1	+	187295779	187296820	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-646220,-497798
chrX:49159885-49160254	chrX	+	49159965	49160244	True	NM_001098413,NM_014009	chrX,chrX	+,-	GAGE10,FOXP3	-37,-38677
chr5:172572699-172574129	chr5	+	172572741	172574127	True	NM_001166175,NM_001205,NM_013980,NM_013979,NM_013978	chr5,chr5,chr5,chr5,chr5	-,+,+,+,+	NKX2-5,BNIP1,BNIP1,BNIP1,BNIP1	88238,-1356,-1356,-1356,-1356
chr10:93685510-93686986	chr10	+	93685607	93686724	True	NM_152429,NM_003972	chr10,chr10	-,+	FGFBP3,BTAF1	-16349,-1930
chr1:179195534-179197040	chr1	+	179195771	179196906	True	NM_001168238,NM_001168237,NM_001168236,NM_007314,NM_001136001,NM_003101	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,+	ABL2,ABL2,ABL2,ABL2,ABL2,SOAT1	1970,1970,1970,1970,1970,66110
chr10:17795034-17795419	chr10	+	17795167	17795246	True	NM_014241,NM_001098844	chr10,chr10	-,+	PTPLA,FAM23A	-135794,-967
chr10:17795034-17795419	chr10	+	18042134	18042213	False	NM_014241,NM_001098844	chr10,chr10	-,+	PTPLA,FAM23A	-382761,-967
chr2:96802742-96803149	chr2	+	96802911	96803090	True	NM_004418,NM_001037228,NM_001002036	chr2,chr2,chr2	-,+,-	DUSP2,LOC285033,ASTL	8142,102886,1138
chr19:29402847-29403338	chr19	+	29402981	29403359	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	52678,300827
chr11:93518412-93520299	chr11	+	93518418	93520136	True	NM_024116,NM_004268	chr11,chr11	-,+	TAF1D,MED17	-43715,-1072
chr1:45250838-45251154	chr1	+	45250947	45251103	True	NR_001456,NR_001457,NM_153274,NR_000024,NR_000015,NM_001012	chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,+,+,+	SNORD38A,SNORD38B,BEST4,SNORD46,SNORD55,RPS8	-7484,-6936,2373,-8834,-9461,-9752
chr7:90466761-90467407	chr7	+	90466799	90467377	True	NM_006980,NM_012395	chr7,chr7	-,+	MTERF,CDK14	1042689,-128155
chr19:49991387-49992256	chr19	+	49991483	49991930	True	NR_001285,NR_026712,NR_000020,NR_000021,NM_012423,NR_000019,NR_000018,NM_001015,NR_029703	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,+,+,+,-	SNORD35B,RPL13AP5,SNORD33,SNORD32A,RPL13A,SNORD34,SNORD35A,RPS11,MIR150	9045,-669,1943,1292,-669,2233,2501,7703,12246
chr11:57194071-57194405	chr11	+	57194127	57194321	True	NM_199329,NM_014096,NM_178570,NM_017611	chr11,chr11,chr11,chr11	-,-,+,-	SLC43A3,SLC43A3,RTN4RL2,SLC43A3	323,252,34017,782
chr17:45054040-45055830	chr17	+	45054081	45055615	True	NM_203400,NM_054022	chr17,chr17	-,+	RPRML,GOSR2	1049,-53646
chr2:209032168-209033117	chr2	+	209032620	209033127	True	NM_014617,NM_001178000	chr2,chr2	-,+	CRYGA,PIKFYVE	-4323,97863
chr8:41521759-41522214	chr8	+	41522054	41522148	True	NM_020478,NR_030161,NM_178819,NM_020480,NM_001142445	chr8,chr8,chr8,chr8,chr8	-,-,+,-,-	ANK1,MIR486,AGPAT6,ANK1,ANK1	706,-4028,-86398,706,706
chr19:47524095-47524298	chr19	+	47524167	47524241	True	NM_002517,NM_017854	chr19,chr19	+,-	NPAS1,TMEM160	-75,27691
chr16:30538940-30539797	chr16	+	30539081	30539473	True	NM_023931,NM_024671,NM_002209	chr16,chr16,chr16	-,-,+	ZNF747,ZNF768,ITGAL	6771,-1171,-55149
chr1:67775789-67776498	chr1	+	67775923	67776375	True	NM_001018067,NM_001559	chr1,chr1	-,+	SERBP1,IL12RB2	119798,-2927
chr17:30230975-30232163	chr17	+	30231317	30232040	True	NM_015355,NM_018428	chr17,chr17	+,-	SUZ12,UTP6	32003,-2588
chrX:52859123-52860668	chrX	+	52859226	52860572	True	NM_130775,NM_001009616	chrX,chrX	+,-	XAGE5,SPANXN5	-18049,-32838
chr21:47402471-47402801	chr21	+	47402620	47402680	True	NM_001848,NM_006657	chr21,chr21	+,-	COL6A1,FTCD	-1008,172851
chr15:64672019-64672758	chr15	+	64672026	64672239	True	NM_014736,NM_001029989,NM_016213	chr15,chr15,chr15	-,-,+	KIAA0101,KIAA0101,TRIP4	1516,1516,7763
chr17:73453298-73454858	chr17	+	73453404	73454318	True	NM_014738,NM_001142643,NM_203506	chr17,chr17,chr17	+,-,-	KIAA0195,CASKIN2,GRB2	-791,51690,-51614
chr7:93518061-93518404	chr7	+	93518184	93518440	True	NM_021955,NM_006528	chr7,chr7	+,-	GNGT1,TFPI2	17379,1675
chr11:43962203-43963548	chr11	+	43962306	43963588	True	NM_021926,NM_001145033	chr11,chr11	-,+	ALX4,C11orf96	368178,517
chr19:10211807-10212169	chr19	+	10211888	10212135	True	NM_031917,NM_001198690,NR_003688,NR_004381,NM_001040664,NM_020230	chr19,chr19,chr19,chr19,chr19,chr19	-,+,+,+,+,+	ANGPTL6,PPAN-P2RY11,SNORD105B,SNORD105,PPAN-P2RY11,PPAN	1347,4763,8289,6191,4763,4763
chr11:14381629-14382322	chr11	+	14381651	14381857	True	NM_000922,NM_001102669,NM_012250,NM_001177314,NM_001177315	chr11,chr11,chr11,chr11,chr11	+,-,-,-,-	PDE3B,RRAS2,RRAS2,RRAS2,RRAS2	283411,-1578,-921,4245,-1620
chr13:31775051-31775374	chr13	+	31775230	31775396	True	NM_194318,NM_006644	chr13,chr13	+,-	B3GALTL,HSPH1	-1170,-39113
chr13:45153142-45154020	chr13	+	45153194	45154017	True	NM_001010897,NM_183422	chr13,chr13	+,-	SERP2,TSC22D1	-205278,-2493
chr17:1666233-1666439	chr17	+	1666326	1666394	True	NM_002615,NR_028505	chr17,chr17	+,-	SERPINF1,C17orf91	-1118,-46760
chr20:52691331-52693045	chr20	+	52691334	52693078	True	NM_003657,NM_002623	chr20,chr20	-,+	BCAS1,PFDN4	-4030,131423
chr2:37569906-37571399	chr2	+	37569996	37571426	True	NM_012413,NM_005813	chr2,chr2	+,-	QPCT,PRKD3	326,-25774
chr12:118405499-118405889	chr12	+	118405544	118405938	True	NM_173598,NM_001130112	chr12,chr12	-,+	KSR2,RFC5	140,48569
chr10:48249346-48249667	chr10	+	48249390	48249576	True	NM_001137549,NM_001137548,NM_001098845,NM_001137556,NM_001040084,NM_002900	chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,-	FAM25G,FAM25C,ANXA8L1,FAM25B,ANXA8,RBP3	-1779,-1779,5730,-1779,5648,141465
chr10:48249346-48249667	chr10	-	49205910	49205978	False	NM_001137549,NM_001137548,NM_002750,NM_001137556	chr10,chr10,chr10,chr10	-,-,+,-	FAM25G,FAM25C,MAPK8,FAM25B	1897,1897,403708,1897
chr10:48249346-48249667	chr10	-	47179773	47179959	False	NM_001137549,NM_001137548,NM_001098845,NM_001137556,NM_001040084,NM_005972	chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,-,+	FAM25G,FAM25C,ANXA8L1,FAM25B,ANXA8,PPYR1	1779,1779,-5733,1779,-5651,-96290
chr9:36139401-36140767	chr9	+	36139492	36140678	True	NM_001190383,NM_022343	chr9,chr9	-,+	GNE,GLIPR2	117868,-2801
chr2:70474745-70475489	chr2	+	70474781	70475421	True	NM_016297,NM_022173,NM_022037	chr2,chr2,chr2	+,-,-	PCYOX1,TIA1,TIA1	9809,408,408
chr14:91317054-91317472	chr14	+	91317062	91317291	True	NM_001010854,NM_001102366	chr14,chr14	-,+	TTC7B,C14orf159	-34301,263065
chr17:10269856-10270756	chr17	+	10270101	10270534	True	NM_003802,NM_020233	chr17,chr17	-,+	MYH13,C17orf48	5839,330392
chr1:156614217-156615093	chr1	+	156614475	156615122	True	NM_198427,NM_006617,NM_021948	chr1,chr1,chr1	+,-,+	BCAN,NES,BCAN	-2786,32117,-2786
chr8:4853008-4853948	chr8	+	4853107	4853831	True	NM_033225,NM_001172574	chr8,chr8	-,+	CSMD1,MCPH1	-779,1410281
chr15:91481117-91482349	chr15	+	91481411	91481800	True	NM_018671,NM_198527,NM_001039675	chr15,chr15,chr15	+,-,+	UNC45A,HDDC3,UNC45A	-3254,-5637,-8059
chr19:46808490-46808924	chr19	+	46808574	46808962	True	NM_152796,NM_152795,NM_152794,NM_022462,NM_032040	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	HIF3A,HIF3A,HIF3A,HIF3A,CCDC8	-6992,-8322,-1769,-6992,108007
chr15:63450932-63452307	chr15	+	63451077	63452164	True	NM_016530,NM_015920	chr15,chr15	+,-	RAB8B,RPS27L	29563,-1336
chr7:111845068-111845427	chr7	+	111845087	111845336	True	NM_021994,NM_014705	chr7,chr7	+,-	ZNF277,DOCK4	1306,1176
chr3:15185798-15186745	chr3	+	15186197	15186591	True	NM_022340,NM_014296	chr3,chr3	-,+	ZFYVE20,CAPN7	-45542,61141
chr2:43033131-43033864	chr2	+	43033330	43033801	True	NM_020744,NM_012205	chr2,chr2	+,-	MTA3,HAAO	-237717,-13579
chr2:192543640-192543906	chr2	+	192543725	192543829	True	NM_001031716,NR_024415,NM_004657	chr2,chr2,chr2	+,+,-	OBFC2A,OBFC2A,SDPR	-916,-979,168227
chr14:31862571-31863946	chr14	+	31862739	31863687	True	NM_025152,NM_015473	chr14,chr14	+,-	NUBPL,HEATR5A	166903,26157
chr12:105803892-105805297	chr12	+	105803903	105805198	True	NM_018171,NM_001145199	chr12,chr12	-,+	APPL2,C12orf75	-173895,-79540
chr17:8067948-8068918	chr17	+	8068002	8068735	True	NR_037447,NM_014232	chr17,chr17	+,-	MIR3676,VAMP2	21757,-1709
chr19:10364321-10365871	chr19	+	10364553	10365885	True	NM_015956,NM_146387,NM_004230,NM_146388	chr19,chr19,chr19,chr19	+,+,-,+	MRPL4,MRPL4,S1PR2,MRPL4	-1971,-1971,-22605,-1971
chr3:49458496-49458981	chr3	+	49458698	49459004	True	NR_028435,NM_022171,NM_000481,NM_001664,NM_032316,NM_001164712,NM_001164710,NM_001164711	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-,-,-	AMT,TCTA,AMT,RHOA,NICN1,AMT,AMT,AMT	1157,-9110,1157,-9172,7803,1157,1157,1157
chr19:49956296-49956504	chr19	+	49956299	49956465	True	NM_153329,NM_001145396,NM_017916	chr19,chr19,chr19	+,+,-	ALDH16A1,ALDH16A1,PIH1D1	7,7,-1184
chr3:51993102-51994168	chr3	+	51993270	51993964	True	NM_033008,NM_033010,NM_080865,NM_001174100,NM_020418	chr3,chr3,chr3,chr3,chr3	-,-,+,-,-	PCBP4,PCBP4,GPR62,PCBP4,PCBP4	7568,2994,-3991,7568,7536
chr3:33262257-33262573	chr3	+	33262272	33262611	True	NM_012157,NM_015551	chr3,chr3	+,-	FBXL2,SUSD5	56322,-1565
chr17:19552328-19552601	chr17	+	19552398	19552642	True	NM_001099646,NM_000382,NM_001031806	chr17,chr17,chr17	-,+,+	SLC47A2,ALDH3A2,ALDH3A2	67451,-385,-385
chr1:33171029-33171593	chr1	+	33171210	33171588	True	NM_030786,NM_001161708,NM_020888	chr1,chr1,chr1	-,-,+	SYNC,SYNC,KIAA1522	-2849,-2849,35923
chr1:209938411-209939358	chr1	+	209938689	209939373	True	NM_152485,NM_025228	chr1,chr1	-,+	C1orf74,TRAF3IP3	18567,-9351
chr17:4688627-4689114	chr17	+	4688654	4689046	True	NM_001144939,NM_001014985,NM_001144941,NM_001144940,NM_182566	chr17,chr17,chr17,chr17,chr17	-,+,-,-,-	VMO1,GLTPD2,VMO1,VMO1,VMO1	733,3207,733,733,733
chr11:2172017-2172487	chr11	+	2172132	2172450	True	NM_001127598,NR_028044,NM_001007139	chr11,chr11,chr11	-,+,-	IGF2,IGF2AS,IGF2	-9791,-10425,-1299
chr7:55084573-55086058	chr7	+	55084632	55085966	True	NM_201284,NM_005228,NM_014302,NM_201282,NM_201283	chr7,chr7,chr7,chr7,chr7	+,+,-,+,+	EGFR,EGFR,SEC61G,EGFR,EGFR	758,758,-257693,758,758
chr19:8510967-8511453	chr19	+	8511085	8511288	True	NM_032152,NM_005968,NM_031203	chr19,chr19,chr19	-,+,+	PRAM1,HNRNPM,HNRNPM	56311,-1333,-1333
chr19:823296-823532	chr19	+	823458	823528	True	NM_001700,NM_024888,NR_036154	chr19,chr19,chr19	+,-,+	AZU1,LPPR3,MIR3187	4302,-1506,-9925
chr8:86154930-86156689	chr8	+	86155183	86156715	True	NM_001099673,NM_198584	chr8,chr8	-,+	C8orf59,CA13	-22540,1000
chr8:102505719-102505998	chr8	+	102505848	102506022	True	NM_016096,NM_024915	chr8,chr8	-,+	ZNF706,GRHL2	-287888,-1231
chr5:56780488-56780708	chr5	+	56780502	56780732	True	NM_001127236,NM_001017992	chr5,chr5	+,-	GPBP1,ACTBL2	-270652,-1866
chr4:109683086-109683728	chr4	+	109683087	109683719	True	NM_001146627,NR_027474,NR_027475,NM_021227,NM_001146590,NM_031279	chr4,chr4,chr4,chr4,chr4,chr4	-,-,-,+,-,-	AGXT2L1,AGXT2L1,AGXT2L1,OSTC,AGXT2L1,AGXT2L1	566,566,566,-111397,566,566
chr16:7379828-7380893	chr16	+	7379925	7380947	True	NM_001146336,NM_145891,NM_145892,NM_145893	chr16,chr16,chr16,chr16	-,+,+,+	TMEM114,RBFOX1,RBFOX1,RBFOX1	1241334,1803,1803,1803
chr21:42541245-42542546	chr21	+	42541411	42542499	True	NM_182832,NM_138991,NR_036167,NM_012105,NM_138992	chr21,chr21,chr21,chr21,chr21	-,+,+,+,+	PLAC4,BACE2,MIR3197,BACE2,BACE2	14717,-1741,-1985,-1741,-1741
chr17:31254372-31254928	chr17	+	31254376	31254822	True	NM_001033504,NM_015544,NM_015194	chr17,chr17,chr17	+,+,-	TMEM98,TMEM98,MYO1D	105,105,-50474
chr14:73956708-73957110	chr14	+	73956711	73956773	True	NM_003744,NM_024644	chr14,chr14	-,+	NUMB,C14orf169	-31425,870
chr1:33368889-33369313	chr1	+	33369089	33369292	True	NM_033504,NM_002143	chr1,chr1	-,+	TMEM54,HPCA	-2136,-17049
chr2:27993325-27993601	chr2	+	27993442	27993511	True	NM_014860,NM_004891,NM_145330	chr2,chr2,chr2	-,+,+	SUPT7L,MRPL33,MRPL33	-106993,1072,1072
chr1:212964909-212965178	chr1	+	212964923	212965193	True	NM_001042553,NM_001042552,NM_001146170,NM_001146171,NM_001146169,NM_001042549,NM_015471	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-,-	TATDN3,TATDN3,TATDN3,TATDN3,TATDN3,NSL1,NSL1	-10,-10,-10,-10,-10,-4,-4
chr22:46071110-46072450	chr22	+	46071341	46072281	True	NM_001167621,NM_148674,NM_013236	chr22,chr22,chr22	+,-,+	ATXN10,SMC1B,ATXN10	-3721,-261841,-3721
chr1:185705772-185706488	chr1	+	185705813	185706277	True	NM_006469,NM_031935	chr1,chr1	-,+	IVNS1ABP,HMCN1	-419352,-2183
chr5:125702842-125703535	chr5	+	125702872	125703266	True	NM_001146319,NM_001182	chr5,chr5	+,-	GRAMD3,ALDH7A1	-7148,227866
chr16:199412-199851	chr16	+	199462	199697	True	NM_001077350,NM_005332	chr16,chr16	-,+	NPRL3,HBZ	-10790,3156
chr16:31176302-31177310	chr16	+	31176511	31177159	True	NM_173502,NM_001170634	chr16,chr16	-,+	PRSS36,FUS	-15096,14271
chr12:26112169-26112433	chr12	+	26112268	26112476	True	NM_001164748,NR_036188,NM_007211	chr12,chr12,chr12	+,-,+	RASSF8,MIR4302,RASSF8	-355,-85256,-355
chr1:113047138-113047459	chr1	+	113047249	113047342	True	NR_036210,NM_024494	chr1,chr1	-,+	MIR4256,WNT2B	-42794,4027
chr10:75937044-75937790	chr10	+	75937062	75937664	True	NM_001123,NM_001202449,NM_207012	chr10,chr10,chr10	+,+,-	ADK,ADK,AP3M1	-866,-866,-26236
chr9:135905649-135905852	chr9	+	135905791	135905865	True	NM_001122823,NM_001162427,NM_012087	chr9,chr9,chr9	+,-,+	GTF3C5,TSC1,GTF3C5	196,-85771,196
chr15:69604472-69606015	chr15	+	69604508	69605428	True	NM_001104554,NM_006305	chr15,chr15	+,-	PAQR5,ANP32A	1313,-491247
chr1:155581111-155581579	chr1	+	155581190	155581560	True	NM_018116,NM_018489	chr1,chr1	+,-	MSTO1,ASH1L	-1234,-48866
chr1:155581111-155581579	chr1	+	155716770	155717140	False	NM_139118,NR_024117	chr1,chr1	-,+	YY1AP1,MSTO2P	-57947,-1212
chr3:47203650-47204649	chr3	+	47203818	47204674	True	NM_014159,NR_033373	chr3,chr3	-,+	SETD2,FLJ39534	843,1185
chr19:674866-675104	chr19	+	674967	675151	True	NM_005860,NM_194460	chr19,chr19	+,-	FSTL3,RNF126	1237,-11734
chr11:73694913-73695285	chr11	+	73694980	73695326	True	NM_153614,NM_003355	chr11,chr11	+,-	DNAJB13,UCP2	-33667,-1091
chr12:2113716-2114223	chr12	+	2113865	2114246	True	NM_000719,NM_152640	chr12,chr12	+,-	CACNA1C,DCP1B	48169,-188
chr3:197876409-197877768	chr3	+	197876697	197877784	True	NR_003291	chr3	-	LOC348840	-69155
chr20:42938907-42939449	chr20	+	42938920	42939448	True	NM_178491,NM_001080472	chr20,chr20	+,-	R3HDML,FITM2	26177,491
chr1:155290234-155290719	chr1	+	155290248	155290618	True	NM_001105205,NM_001105204,NM_014328,NM_001039517,NM_001105203	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	RUSC1,RUSC1,RUSC1,C1orf104,RUSC1	3109,21,3599,3370,21
chr13:28514059-28515029	chr13	+	28514102	28515022	True	NR_002162,NM_001265	chr13,chr13	+,-	ATP5EP2,CDX2	4320,28345
chr9:2846468-2847602	chr9	+	2846765	2847501	True	NM_133497,NM_014878	chr9,chr9	+,-	KCNV2,KIAA0020	-129296,-2635
chr19:10713652-10713881	chr19	+	10713676	10713898	True	NM_001145056,NM_005498	chr19,chr19	+,-	SLC44A2,AP1M2	-606,-15685
chr13:52597656-52598170	chr13	+	52598157	52598219	True	NM_001005918,NM_021645	chr13,chr13	-,+	ATP7B,UTP14C	-12527,607
chr21:43816261-43817725	chr21	+	43816268	43817596	True	NM_018961,NM_024022,NM_032405,NM_001001895,NR_027348	chr21,chr21,chr21,chr21,chr21	+,-,-,+,-	UBASH3A,TMPRSS3,TMPRSS3,UBASH3A,TMPRSS3	6422,-68,-68,6422,-7015
chr22:47021078-47022035	chr22	+	47021161	47022008	True	NM_015124,NM_014246	chr22,chr22	+,-	GRAMD4,CELSR1	649,-88094
chr14:53171208-53171876	chr14	+	53171338	53171682	True	NM_002806,NM_014584	chr14,chr14	+,-	PSMC6,ERO1L	2213,-8919
chr13:70695039-70695646	chr13	+	70695210	70695576	True	NR_002717,NM_020866	chr13,chr13	+,-	ATXN8OS,KLHL1	-13923,-12585
chr14:23821227-23821443	chr14	+	23821256	23821470	True	NM_020372,NM_016609,NM_172314	chr14,chr14,chr14	-,-,+	SLC22A17,SLC22A17,IL25	59,660,20547
chr4:5022835-5023829	chr4	+	5022900	5023842	True	NM_018659,NM_018401	chr4,chr4	-,+	CYTL1,STK32B	-1703,29684
chr14:101291995-101292198	chr14	+	101292019	101292087	True	NR_003531,NR_003530,NR_033360,NR_002766,NR_033358,NR_033359,NM_001134888	chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,+,+,+,-	MEG3,MEG3,MEG3,MEG3,MEG3,MEG3,RTL1	357,357,357,357,357,357,59147
chrX:70586765-70587430	chrX	+	70586855	70587465	True	NM_001171162,NM_138923,NM_004606	chrX,chrX,chrX	-,+,+	ZMYM3,TAF1,TAF1	-111808,-792,-792
chr2:20355744-20357304	chr2	+	20355934	20357350	True	NR_033875,NM_002997	chr2,chr2	+,-	FLJ12334,SDC1	-287370,67637
chr6:52052531-52054020	chr6	+	52052553	52053957	True	NM_002190,NM_052872	chr6,chr6	+,-	IL17A,IL17F	-1419,55391
chr20:32079981-32080533	chr20	+	32080091	32080567	True	NM_001032999,NM_003098	chr20,chr20	+,-	CBFA2T2,SNTA1	-2214,-48393
chr11:369815-370058	chr11	+	369860	369958	True	NM_178537,NM_001135054	chr11,chr11	+,-	B4GALNT4,SIGIRR	-116,45091
chr5:112258018-112259971	chr5	+	112258285	112259514	True	NM_005669,NM_152624	chr5,chr5	-,+	REEP5,DCP2	-254,52918
chr7:19157941-19158719	chr7	+	19158009	19158745	True	NM_001204148,NM_000474	chr7,chr7	+,-	HDAC9,TWIST1	-609160,-714
chr1:154380307-154380947	chr1	+	154380336	154380988	True	NM_001010846,NM_181359,NM_000565	chr1,chr1,chr1	-,+,+	SHE,IL6R,IL6R	93588,-2718,-2718
chr14:102606021-102606223	chr14	+	102606046	102606268	True	NM_144574,NM_181308,NM_181302,NM_001017963,NM_181291	chr14,chr14,chr14,chr14,chr14	+,+,+,-,+	WDR20,WDR20,WDR20,HSP90AA1,WDR20	-35,-35,-35,30,-35
chr17:3540501-3540850	chr17	+	3540564	3540751	True	NM_004937,NM_001031681,NM_013276	chr17,chr17,chr17	+,+,-	CTNS,CTNS,SHPK	-853,-853,-948
chr16:85613985-85615006	chr16	+	85614093	85614737	True	NM_001134473,NM_016095	chr16,chr16	+,-	KIAA0182,GINS2	30291,107907
chr12:100567347-100567865	chr12	+	100567352	100567561	True	NR_036632,NR_024261,NR_031728	chr12,chr12,chr12	-,-,+	GOLGA2B,GOLGA2B,MIR1827	-231,-231,16100
chr5:109870885-109871889	chr5	+	109871351	109871875	True	NM_001039763,NM_138773	chr5,chr5	-,+	TMEM232,SLC25A46	190625,202878
chr14:21245343-21247060	chr14	+	21245501	21246247	True	NM_005615,NM_198232,NM_022360	chr14,chr14,chr14	+,-,+	RNASE6,RNASE1,EDDM3B	2962,24361,-8980
chr17:1387920-1388192	chr17	+	1387956	1388238	True	NM_001080779,NM_001080950,NR_028514,NM_033375	chr17,chr17,chr17,chr17	-,-,+,-	MYO1C,MYO1C,LOC100306951,MYO1C	7813,863,31974,6784
chr12:54453405-54453625	chr12	+	54453449	54453599	True	NM_153633,NR_026655,NR_026658	chr12,chr12,chr12	+,+,-	HOXC4,FLJ12825,LOC100240735	-5839,-1462,22058
chr2:176970271-176971227	chr2	+	176970408	176971206	True	NM_001080458,NM_021192,NM_021193	chr2,chr2,chr2	-,+,+	EVX2,HOXD11,HOXD12	-21718,877,-5929
chr3:184017569-184019047	chr3	+	184017642	184018715	True	NM_033259,NM_002808	chr3,chr3	-,+	CAMK2N2,PSMD2	-38391,-671
chr3:77089472-77090121	chr3	+	77089484	77090137	True	NM_002942,NM_001128223	chr3,chr3	+,-	ROBO2,ZNF717	-241,-1255229
chrX:11139675-11141600	chrX	+	11139741	11141092	True	NM_005333,NM_013423	chrX,chrX	+,-	HCCS,ARHGAP6	-10386,143063
chr20:62709249-62709623	chr20	+	62709338	62709524	True	NM_182647,NM_001007125,NM_001039467,NM_001200019,NM_000913,NM_005873	chr20,chr20,chr20,chr20,chr20,chr20	+,-,-,+,+,-	OPRL1,C20orf201,RGS19,OPRL1,OPRL1,RGS19	1946,6238,1850,6844,1946,1371
chr2:197667276-197667601	chr2	+	197667308	197667458	True	NM_001080539,NM_213608,NM_012086	chr2,chr2,chr2	+,-,-	CCDC150,C2orf66,GTF3C3	-163003,7592,-2883
chr7:86601641-86602705	chr7	+	86601703	86602562	True	NM_152748,NM_001142326	chr7,chr7	-,+	KIAA1324L,DMTF1	-6412,179114
chr3:111511525-111512587	chr3	+	111511745	111512579	True	NM_024508,NM_001134437	chr3,chr3	-,+	ZBED2,PHLDB2	-197579,-60470
chr11:73497686-73498858	chr11	+	73497746	73498905	True	NM_198896,NM_016055	chr11,chr11	-,+	RAB6A,MRPL48	-25545,11
chr8:22300343-22300956	chr8	+	22300344	22300659	True	NM_005605,NR_029714	chr8,chr8	+,-	PPP3CC,MIR320A	-1802,-197788
chr14:105648034-105648762	chr14	+	105648078	105648584	True	NM_177533,NM_033271	chr14,chr14	-,+	NUDT14,BTBD6	-418,66294
chr1:207139120-207139889	chr1	+	207139178	207139719	True	NM_001122979,NM_006850,NM_032029,NM_001170631	chr1,chr1,chr1,chr1	-,+,-,-	FCAMR,IL24,FCAMR,FCAMR	4308,-68441,4308,4308
chr22:33447784-33448305	chr22	+	33447788	33448282	True	NM_000362,NM_001135774	chr22,chr22	+,-	TIMP3,SYN3	-251037,6145
chrX:36160094-36161563	chrX	+	36160380	36161600	True	NM_001098843,NM_031442	chrX,chrX	+,-	CXorf30,TMEM47	92450,-1484975
chr1:198125057-198125873	chr1	+	198125148	198125766	True	NM_133494,NM_001195216	chr1,chr1	+,-	NEK7,DENND1B	341,-380525
chr12:72147573-72148539	chr12	+	72147902	72148389	True	NM_014999,NM_144982	chr12,chr12	+,-	RAB21,ZFC3H1	268,-90153
chr17:41277272-41277571	chr17	+	41277364	41277620	True	NR_003108,NM_007299,NM_007298,NM_007297,NM_007294,NR_027676,NM_007300	chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,-,-,-,-	NBR2,BRCA1,BRCA1,BRCA1,BRCA1,BRCA1,BRCA1	-21,4,-1232,4,26,-24,26
chrX:16801687-16802007	chrX	+	16801756	16801860	True	NM_019857,NM_001168683,NM_018360	chrX,chrX,chrX	-,+,+	CTPS2,TXLNG,TXLNG	-70697,2694,2694
chr11:108370052-108370780	chr11	+	108370245	108370813	True	NM_153705,NM_004398	chr11,chr11	-,+	KDELC2,DDX10	-1086,165002
chr10:103986760-103988105	chr10	+	103986960	103988036	True	NM_005029,NM_152310	chr10,chr10	-,+	PITX3,ELOVL3	13245,-868
chr1:31196421-31196782	chr1	+	31196633	31196701	True	NR_034182,NM_002379	chr1,chr1	+,-	LOC100129196,MATN1	-5065,-201
chr20:3766855-3767057	chr20	+	3766870	3767070	True	NM_021873,NM_021872,NM_001810,NM_015417,NM_004358	chr20,chr20,chr20,chr20,chr20	+,+,-,-,+	CDC25B,CDC25B,CENPB,SPEF1,CDC25B	9330,9330,317,-4768,9330
chr11:118990201-118991063	chr11	+	118990446	118991112	True	NM_015517,NM_198971,NM_001382	chr11,chr11,chr11	+,+,-	HINFP,HINFP,DPAGT1	1175,1175,-17661
chr18:10698671-10698978	chr18	+	10698684	10698959	True	NM_003826,NM_022068	chr18,chr18	+,-	NAPG,FAM38B	-172866,449859
chr1:151029920-151031128	chr1	+	151030332	151031129	True	NM_001038707,NM_006818,NM_020239	chr1,chr1,chr1	-,+,-	CDC42SE1,MLLT11,CDC42SE1	1046,1021,1046
chr10:1068597-1069135	chr10	+	1068632	1069112	True	NM_033261,NR_024628,NR_024629,NR_027708,NR_027709	chr10,chr10,chr10,chr10,chr10	-,+,+,+,+	IDI2,IDI2-AS1,IDI2-AS1,IDI2-AS1,IDI2-AS1	2737,-106,-106,-106,-106
chr22:41637999-41638515	chr22	+	41638269	41638337	True	NM_138481,NM_031488	chr22,chr22	-,+	CHADL,L3MBTL2	-1334,-37017
chr19:22234994-22235270	chr19	+	22235020	22235318	True	NM_007153,NM_033468	chr19,chr19	-,+	ZNF208,ZNF257	-41275,-13
chr5:76935244-76936286	chr5	+	76935305	76936269	True	NM_032109,NM_003719	chr5,chr5	-,+	OTP,PDE8B	-783,-428655
chr5:6868865-6869184	chr5	+	6868892	6869079	True	NM_001171806,NR_036242	chr5,chr5	+,-	PAPD7,MIR4278	-122848,-40858
chrX:110341223-110342159	chrX	+	110341250	110342109	True	NM_002578,NM_014289	chrX,chrX	+,-	PAK3,CAPN6	-1926,171715
chr4:113560524-113561577	chr4	+	113560733	113561562	True	NR_029835,NM_016648,NR_029857,NR_029858,NR_029860,NM_015454,NR_029859,NM_018392	chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4	-,+,-,-,-,+,-,-	MIR302A,LARP7,MIR302B,MIR302C,MIR367,LARP7,MIR302D,C4orf21	7904,-2673,8210,8083,7594,-2181,7724,-2582
chr22:46439793-46440059	chr22	+	46439792	46440052	True	NR_027034,NR_027036	chr22,chr22	+,-	LOC150381,LOC100271722	9673,746
chr11:107805372-107805750	chr11	+	107805710	107805782	True	NM_017515,NM_017516	chr11,chr11	-,+	SLC35F2,RAB39	-75796,-6484
chr5:111262607-111263672	chr5	+	111262626	111263432	True	NM_001142474,NR_015370	chr5,chr5	-,+	C5orf13,NCRNA00219	49246,232790
chr12:8183220-8183801	chr12	+	8183221	8183426	True	NM_004054,NM_018416	chr12,chr12	-,+	C3AR1,FOXJ2	35580,1932
chr16:67561181-67561633	chr16	+	67561306	67561374	True	NM_001138,NM_001193524,NM_001193523,NM_001193522,NM_024519	chr16,chr16,chr16,chr16,chr16	-,+,+,+,+	AGRP,FAM65A,FAM65A,FAM65A,FAM65A	-43590,9990,2165,1345,1342
chr7:43968174-43968743	chr7	+	43968213	43968614	True	NM_001077664,NM_015983	chr7,chr7	-,+	URGCP,UBE2D4	-2217,-2229
chr3:150924724-150925173	chr3	+	150924780	150925203	True	NM_053002,NM_013308	chr3,chr3	+,-	MED12L,GPR171	-120162,-3792
chr15:31940384-31941964	chr15	+	31940512	31941698	True	NM_015995,NM_130901	chr15,chr15	+,-	KLF13,OTUD7A	-321488,5894
chr1:179831128-179832283	chr1	+	179831166	179831777	True	NM_015602,NM_001199260	chr1,chr1	+,-	TOR1AIP1,TOR1AIP2	19642,15221
chr3:42641106-42641764	chr3	+	42641206	42641758	True	NM_001201572,NM_016305,NM_005385	chr3,chr3,chr3	-,+,+	SEC22C,SS18L2,NKTR	864,-8964,388
chr2:241832222-241832468	chr2	+	241832246	241832434	True	NM_001085437,NM_024861,NM_000030	chr2,chr2,chr2	-,-,+	C2orf54,C2orf54,AGXT	3189,-794,-24135
chr6:35773897-35775302	chr6	+	35773951	35775137	True	NM_001832,NM_182548	chr6,chr6	-,+	CLPS,LHFPL5	-8849,-931
chr16:48723544-48723857	chr16	+	48723616	48723761	True	NM_153029,NM_031490	chr16,chr16	-,+	N4BP1,LONP2	-79496,-445456
chr11:66360027-66360283	chr11	+	66360082	66360276	True	NM_005125,NM_018219	chr11,chr11	+,-	CCS,CCDC87	413,328
chr19:292405-292622	chr19	+	292414	292640	True	NM_003712,NM_177543,NM_001005240,NM_177526	chr19,chr19,chr19,chr19	-,-,+,-	PPAP2C,PPAP2C,OR4F17,PPAP2C	-979,-1245,-181786,-979
chr19:57875963-57877168	chr19	+	57876143	57876835	True	NM_173631,NR_002166,NM_020633	chr19,chr19,chr19	+,+,-	ZNF547,TRAPPC2P1,VN1R1	-1303,-1315,91336
chr4:24323195-24324742	chr4	+	24323215	24324726	True	NR_030299,NM_003102	chr4,chr4	-,+	MIR573,SOD3	197238,472358
chr20:44564589-44564971	chr20	+	44564680	44564801	True	NM_022104,NM_182676	chr20,chr20	+,-	PCIF1,PLTP	-1414,-23894
chr9:41433745-41434001	chr9	+	41433753	41433819	True	NM_015667	chr9	+	FAM75A7	66859
chr9:41433745-41434001	chr9	-	65576542	65576608	False	NR_024496,NM_015667	chr9,chr9	+,-	LOC442421,FAM75A7	917660,-66932
chr4:39406948-39408773	chr4	+	39407514	39408727	True	NM_002913,NM_175737	chr4,chr4	-,+	RFC1,KLB	-39513,3
chr13:64311711-64312217	chr13	+	64311994	64312054	True	NM_022843,NR_002171	chr13,chr13	-,+	PCDH20,OR7E156P	-2322339,-477
chr19:12817970-12818394	chr19	+	12818099	12818279	True	NR_002751,NM_004317	chr19,chr19	-,+	SNORD41,ASNA1	-767,30026
chr7:72350593-72350929	chr7	+	72350601	72350789	True	NR_003666,NM_172020	chr7,chr7	-,+	SPDYE7P,POM121	-10946,-716
chr7:72350593-72350929	chr7	-	75114807	75114857	False	NM_001099415,NM_001099435	chr7,chr7	-,+	POM121C,SPDYE5	761,9441
chr5:36066437-36066672	chr5	+	36066436	36066720	True	NM_174914,NM_005983,NM_001168316,NR_031764	chr5,chr5,chr5,chr5	-,+,-,-	UGT3A2,SKP2,UGT3A2,UGT3A2	353,85468,353,353
chr14:23303911-23305237	chr14	+	23304174	23305188	True	NM_004995,NM_181304,NM_181305,NM_181306,NM_181307,NM_180982,NM_001126106,NM_178336	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,+,+,+,-,+	MMP14,MRPL52,MRPL52,MRPL52,MRPL52,MRPL52,SLC7A7,MRPL52	604,-5133,-5133,-5133,-5133,-5133,-15160,-5133
chr13:53028642-53029495	chr13	+	53028778	53029384	True	NM_001098525,NM_016075,NM_018204	chr13,chr13,chr13	+,-,+	CKAP2,VPS36,CKAP2	110,-4015,110
chr15:41523673-41524616	chr15	+	41523849	41524407	True	NM_152596,NM_007236	chr15,chr15	-,+	EXD1,CHP	-954,-463
chr1:160157977-160158493	chr1	+	160158011	160158513	True	NM_001231,NR_028106	chr1,chr1	+,-	CASQ1,DCAF8	1771,73814
chr1:153920277-153920593	chr1	+	153920314	153920616	True	NM_130898,NM_014856	chr1,chr1	+,-	CREB3L4,DENND4B	19780,-1160
chr14:23586580-23586917	chr14	+	23586718	23586944	True	NM_001805,NM_017924	chr14,chr14	-,+	CEBPE,C14orf119	1580,-21981
chr19:47989534-47990479	chr19	+	47989635	47990119	True	NM_015711,NM_007059	chr19,chr19	+,-	GLTSCR1,KPTN	121333,-2114
chr2:233899166-233899593	chr2	+	233899211	233899637	True	NM_005383,NM_019850	chr2,chr2	+,-	NEU2,NGEF	-1880,-21260
chr14:64969860-64970071	chr14	+	64969909	64969975	True	NM_006977,NM_001123329,NM_014950	chr14,chr14,chr14	-,+,+	ZBTB25,ZBTB1,ZBTB1	629,1316,1316
chr22:39712692-39712954	chr22	+	39712698	39712998	True	NM_001033853,NM_000967,NR_000028,NR_002439,NR_000026,NR_000027,NM_145731	chr22,chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,-,-,+	RPL3,RPL3,SNORD83B,SNORD43,RNU86,SNORD83A,SYNGR1	2722,2722,-2782,2170,-39,-1386,32955
chr2:99339801-99341392	chr2	+	99340016	99341399	True	NM_012214,NM_014044	chr2,chr2	-,+	MGAT4A,UNC50	6248,-115029
chr3:129142325-129142814	chr3	+	129142502	129142808	True	NM_018262,NM_207307	chr3,chr3	+,-	IFT122,C3orf25	16159,4736
chr20:60944426-60945463	chr20	+	60944504	60945346	True	NM_001024,NM_005560	chr20,chr20	+,-	RPS21,LAMA5	16774,-2136
chr14:78226180-78226846	chr14	+	78226600	78226862	True	NM_174943,NM_001173978,NM_012245	chr14,chr14,chr14	+,+,-	C14orf178,C14orf178,SNW1	310,310,685
chr1:16086744-16087420	chr1	+	16087218	16087304	True	NM_001024215,NM_001024216,NM_001089591,NM_017556	chr1,chr1,chr1,chr1	+,+,-,+	FBLIM1,FBLIM1,UQCRHL,FBLIM1	3689,4154,46940,-2014
chr16:2588406-2588660	chr16	+	2588432	2588670	True	NM_001048212,NR_036139,NM_031268,NM_002613	chr16,chr16,chr16,chr16	-,-,+,+	CEMP1,MIR3178,PDPK1,PDPK1	-7023,-6426,-513,-513
chr16:2588406-2588660	chr16	-	2722873	2723047	False	NM_031948,NM_018992	chr16,chr16	-,+	PRSS27,KCTD5	47555,9447
chr2:191882578-191883007	chr2	+	191882814	191883056	True	NM_139266,NM_014905,NM_007315	chr2,chr2,chr2	-,+,-	STAT1,GLS,STAT1	-3838,-137326,-3838
chr9:72874307-72874526	chr9	+	72874314	72874450	True	NM_001206,NM_015110	chr9,chr9	-,+	KLF9,SMC5	155173,-487
chr3:133612647-133613268	chr3	+	133612683	133613253	True	NM_021203,NM_016577	chr3,chr3	+,-	SRPRB,RAB6B	-109864,1488
chr19:5721342-5722425	chr19	+	5721462	5722475	True	NM_004793,NM_152784	chr19,chr19	-,+	LONP1,TMEM146	-1286,-832
chr22:25352693-25353521	chr22	+	25352963	25353517	True	NM_001145206,NM_001001663	chr22,chr22	+,-	KIAA1671,TMEM211	70423,-17649
chr13:32433366-32433859	chr13	+	32433427	32433859	True	NR_027062,NM_001136571	chr13,chr13	+,-	EEF1DP3,ZAR1L	-12566,452282
chr1:12564926-12565205	chr1	+	12564930	12565128	True	NR_003025,NM_004753,NR_003022	chr1,chr1,chr1	+,-,+	SNORA59A,DHRS3,SNORA59B	2171,112742,2171
chr2:158295842-158296834	chr2	+	158295883	158296872	True	NM_014568,NM_004288	chr2,chr2	+,-	GALNT5,CYTIP	-181595,3782
chr1:18957159-18957473	chr1	+	18957181	18957373	True	NM_001135254,NM_002584,NM_152232,NM_013945	chr1,chr1,chr1,chr1	+,+,-,+	PAX7,PAX7,TAS1R2,PAX7	126,126,228832,126
chr1:110282359-110282599	chr1	+	110282359	110282523	True	NM_000851,NR_024537,NM_000849	chr1,chr1,chr1	+,-,-	GSTM5,GSTM3,GSTM3	-27546,1187,1187
chr11:47234349-47234953	chr11	+	47234419	47234771	True	NM_000107,NM_016223	chr11,chr11	+,-	DDB2,PACSIN3	1721,-26409
chr1:36773932-36774150	chr1	+	36773966	36774194	True	NM_001162530,NM_024676,NM_018166	chr1,chr1,chr1	+,+,-	SH3D21,SH3D21,FAM176B	-2023,-1309,15611
chr11:107993884-107995081	chr11	+	107994011	107994967	True	NM_000019,NM_002519	chr11,chr11	+,-	ACAT1,NPAT	-1821,98448
chr16:48642207-48642845	chr16	+	48642312	48642784	True	NM_153029,NM_031490	chr16,chr16	-,+	N4BP1,LONP2	1393,-364160
chr8:145598542-145598791	chr8	+	145598661	145598735	True	NM_024555,NM_174922	chr8,chr8	-,+	FBXL6,ADCK5	-16529,-981
chr2:74870089-74871386	chr2	+	74870293	74871395	True	NM_138804,NM_004263	chr2,chr2	-,+	C2orf65,SEMA4F	3826,9997
chrY:6737714-6738927	chrY	+	6737801	6738887	True	NM_001143,NM_033284	chrY,chrY	-,+	AMELY,TBL1Y	3238,39839
chr5:68460666-68461311	chr5	+	68460797	68461274	True	NM_176816,NM_031966	chr5,chr5	-,+	CCDC125,CCNB1	155189,1638
chr18:77869331-77869540	chr18	+	77869333	77869398	True	NM_014913,NM_006701	chr18,chr18	+,-	ADNP2,TXNL4A	-2469,-120801
chr2:27009359-27009688	chr2	+	27009363	27009671	True	NM_001029881,NM_001042426,NM_001809	chr2,chr2,chr2	-,+,+	CIB4,CENPA,CENPA	-145152,-531,-532
chr17:20798105-20798654	chr17	+	20798343	20798552	True	NM_001004306,NM_015510	chr17,chr17	-,+	CCDC144NL,DHRS7B	952,231705
chr17:20798105-20798654	chr17	-	16594512	16594666	False	NM_020787,NM_014695	chr17,chr17	-,+	ZNF624,CCDC144A	-37345,-924
chr17:20798105-20798654	chr17	-	20225825	20225881	False	NM_001042685,NR_023380	chr17,chr17	-,+	LGALS9B,CCDC144C	145017,-1389
chr17:20798105-20798654	chr17	+	18527487	18527956	False	NR_036647,NM_001037330	chr17,chr17	-,+	CCDC144B,TRIM16L	1024,97445
chr17:17682500-17683179	chr17	+	17682647	17683047	True	NM_030665,NR_024007	chr17,chr17	+,-	RAI1,SMCR5	-97911,-2
chr3:74458987-74460546	chr3	+	74459068	74460532	True	NR_031714,NM_020872	chr3,chr3	+,-	MIR1324,CNTN3	1219381,109861
chr2:239337089-239337669	chr2	+	239337226	239337702	True	NR_037809,NM_001040445	chr2,chr2	-,+	LOC151171,ASB1	126488,-1651
chr19:38811056-38811289	chr19	+	38811069	38811191	True	NM_001145462,NM_001145461,NM_001039671,NM_001145463,NM_001039673,NM_001039672,NM_004823	chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,+	YIF1B,YIF1B,YIF1B,YIF1B,YIF1B,YIF1B,KCNK6	-4624,-4624,-4624,-4463,-4463,-4463,-636
chr9:91925730-91926016	chr9	+	91925772	91926064	True	NM_016848,NM_001827,NR_036108,NM_024077	chr9,chr9,chr9,chr9	-,+,+,+	SHC3,CKS2,MIR3153,SECISBP2	-132090,48,1075,7347
chr4:93225445-93225973	chr4	+	93225643	93225944	True	NM_183049,NM_001510	chr4,chr4	-,+	TMSL3,GRID2	-1465374,-144
chr22:43549650-43551099	chr22	+	43549668	43551034	True	NM_007311,NM_173467,NM_000714	chr22,chr22,chr22	+,-,+	TSPO,MCAT,TSPO	-2192,-10265,-2192
chr5:114515187-114515531	chr5	+	114515200	114515524	True	NM_001284,NM_001017398,NM_001017397,NM_018700	chr5,chr5,chr5,chr5	+,-,-,-	AP3S1,TRIM36,TRIM36,TRIM36	662094,769,769,769
chr11:60680722-60681582	chr11	+	60680740	60681442	True	NM_014502,NM_024092	chr11,chr11	-,+	PRPF19,TMEM109	-6679,-18
chr1:65211531-65212155	chr1	+	65211586	65212200	True	NM_002227,NM_018211	chr1,chr1	-,+	JAK1,RAVER2	220037,-859
chr22:25349770-25350838	chr22	+	25349926	25350642	True	NM_001145206,NM_001001663	chr22,chr22	+,-	KIAA1671,TMEM211	73298,-14612
chr11:103907026-103907431	chr11	+	103907197	103907463	True	NM_025208,NM_001001711	chr11,chr11	-,+	PDGFD,DDI1	127614,-2
chr2:112899710-112900935	chr2	+	112899757	112900904	True	NM_001128165,NM_032494,NM_153214	chr2,chr2,chr2	+,-,+	FBLN7,ZC3H8,FBLN7	-3846,111811,-3846
chr4:1796231-1796460	chr4	+	1796350	1796508	True	NM_012318,NM_000142,NM_001163213,NM_022965	chr4,chr4,chr4,chr4	-,+,+,+	LETM1,FGFR3,FGFR3,FGFR3	61516,-1362,-1362,-1362
chr9:139293623-139293846	chr9	+	139293723	139293861	True	NM_003086,NM_015160	chr9,chr9	-,+	SNAPC4,PMPCA	-834,11254
chr16:2564033-2564247	chr16	+	2564128	2564198	True	NM_001145815,NM_001048212,NM_015944,NM_001694,NM_001198569	chr16,chr16,chr16,chr16,chr16	+,-,+,+,+	AMDHD2,CEMP1,AMDHD2,ATP6V0C,ATP6V0C	6164,17261,6164,-308,-452
chr5:25197787-25198730	chr5	+	25198178	25198735	True	NR_037896,NM_020227	chr5,chr5	-,+	LOC340107,PRDM9	-357486,-1690509
chr1:46908158-46908481	chr1	+	46908181	46908481	True	NM_001097611,NM_001441	chr1,chr1	-,+	KNCN,FAAH	108456,-48293
chrX:74961410-74962759	chrX	+	74961449	74962785	True	NR_030737,NM_016500	chrX,chrX	-,+	TTC3P1,CXorf26	179,429985
chr8:109264798-109266411	chr8	+	109265052	109265786	True	NM_001568,NM_014673	chr8,chr8	-,+	EIF3E,TTC35	-4093,190066
chr13:52418869-52419141	chr13	+	52418877	52419127	True	NR_027047,NR_027048,NM_031290	chr13,chr13,chr13	-,-,+	NCRNA00282,NCRNA00282,CCDC70	209,209,16989
chr5:140094518-140095503	chr5	+	140094754	140095516	True	NR_026704,NM_002109,NR_026703	chr5,chr5,chr5	+,-,+	VTRNA1-2,HARS,VTRNA1-1	2994,-23783,-3953
chr11:65637184-65637627	chr11	+	65637237	65637511	True	NR_037718,NM_025128,NM_016938,NM_001335	chr11,chr11,chr11,chr11	-,+,-,+	EFEMP2,MUS81,EFEMP2,CTSW	2944,-9416,2944,9772
chr12:107017675-107018398	chr12	+	107017681	107018084	True	NM_001033050,NM_002920	chr12,chr12	-,+	MTERFD3,RFX4	362904,-22783
chr7:149017110-149018375	chr7	+	149017171	149018332	True	NR_036573,NM_015694	chr7,chr7	+,-	LOC155060,ZNF777	-34850,139772
chr1:42368505-42369970	chr1	+	42368557	42369468	True	NM_007102,NM_001127714	chr1,chr1	+,-	GUCA2B,HIVEP3	249623,15079
chr14:22102275-22102528	chr14	+	22102287	22102477	True	NM_001001912,NM_001005466	chr14,chr14	+,-	OR4E2,OR10G2	30819,571
chr15:49911140-49911686	chr15	+	49911225	49911735	True	NM_152647,NM_020234,NM_001144955	chr15,chr15,chr15	-,+,+	C15orf33,DTWD1,DTWD1	1433,1490,1490
chr8:109799887-109801043	chr8	+	109800005	109800853	True	NM_153015,NM_003301	chr8,chr8	-,+	TMEM74,TRHR	-235,298822
chr14:19553440-19554686	chr14	+	19554372	19554446	True	NM_001145442,NR_027480,NM_001005356	chr14,chr14,chr14	-,+,+	POTEM,POTEG,POTEG	465884,-1065,-1065
chr16:83980631-83981885	chr16	+	83980665	83981761	True	NM_013370,NM_001080442,NM_182981,NM_182980	chr16,chr16,chr16,chr16	+,-,+,+	OSGIN1,SLC38A8,OSGIN1,OSGIN1	910,94051,5065,910
chr10:72239414-72241096	chr10	+	72239530	72241114	True	NM_018055,NM_014431	chr10,chr10	-,+	NODAL,KIAA1274	-38065,-1017
chr19:47352353-47352628	chr19	+	47352556	47352670	True	NM_021575,NM_004069,NM_004491	chr19,chr19,chr19	-,-,+	AP2S1,AP2S1,GRLF1	1583,1583,69262
chr16:2075568-2075877	chr16	+	2075727	2075877	True	NM_001130012,NM_178167,NM_001099456,NM_004785	chr16,chr16,chr16,chr16	+,-,+,+	SLC9A3R2,ZNF598,NPW,SLC9A3R2	1010,-15964,-6257,1010
chr8:97273064-97273669	chr8	+	97273078	97273639	True	NM_015942,NM_014754	chr8,chr8	-,+	MTERFD1,PTDSS1	207,527
chr2:100723165-100724136	chr2	+	100723203	100724021	True	NM_001011717,NM_001025108	chr2,chr2	+,-	NMS,AFF3	362922,-1158
chr1:166945049-166945364	chr1	+	166945161	166945333	True	NM_199351,NM_032858	chr1,chr1	-,+	ILDR2,MAEL	-600,13185
chr16:21533512-21533887	chr16	+	21533553	21533621	True	NM_001077180,NR_002594	chr16,chr16	+,-	METTL9,SLC7A5P2	77234,-1788
chr16:21533512-21533887	chr16	+	29626821	29626889	False	NR_002593,NM_001030288	chr16,chr16	-,+	SLC7A5P1,SPN	-1783,47410
chrX:21768451-21768714	chrX	+	21768455	21768700	True	NM_015884,NM_014332	chrX,chrX	+,-	MBTPS2,SMPX	88955,7581
chr8:23390114-23391280	chr8	+	23390425	23391311	True	NM_016612,NM_001128930	chr8,chr8	+,-	SLC25A37,ENTPD4	-4113,-75181
chr19:13887667-13888056	chr19	+	13887705	13887767	True	NR_036515,NM_014047	chr19,chr19	-,+	LOC284454,C19orf53	59386,-2499
chr7:126893646-126893853	chr7	+	126893662	126893900	True	NM_001127323,NM_001662	chr7,chr7	-,+	GRM8,ARF5	-1234,334505
chr12:112847182-112847419	chr12	+	112847241	112847467	True	NM_002834,NM_000970,NM_001024662	chr12,chr12,chr12	+,-,-	PTPN11,RPL6,RPL6	9068,26,26
chr17:43393890-43394104	chr17_ctg5_hap1	+	9025	9237	False	NM_001159330,NM_001113738	chr17_ctg5_hap1,chr17_ctg5_hap1	-,+	ARHGAP27,ARL17A	89398,186483
chr17:43393890-43394104	chr17	+	43393889	43394101	True	NM_003954,NR_024435	chr17,chr17	-,+	MAP3K14,LOC100133991	363,-54382
chr10:74938103-74938813	chr10	+	74938261	74938372	True	NR_024203,NM_173348	chr10,chr10	-,+	ECD,FAM149B1	-10408,-10440
chr3:187577520-187578021	chr3	+	187577859	187577956	True	NR_034062,NM_001706	chr3,chr3	+,-	LOC100131635,BCL6	-157769,-114346
chrX:154254413-154255056	chrX	+	154254534	154254962	True	NM_023934,NM_000132	chrX,chrX	+,-	FUNDC2,F8	101,-3536
chr3:48128052-48129576	chr3	+	48128270	48129599	True	NM_004345,NM_001134364,NM_002375,NM_030885	chr3,chr3,chr3,chr3	+,-,-,-	CAMP,MAP4,MAP4,MAP4	135262,1220,1220,1220
chr1:153642750-153643083	chr1	+	153642756	153643058	True	NM_000906,NM_004515	chr1,chr1	+,-	NPR1,ILF2	8105,471
chr19:44670610-44671629	chr19	+	44670773	44671441	True	NR_033341,NM_001146220,NM_001032373,NM_001032374,NM_015919,NM_001032372	chr19,chr19,chr19,chr19,chr19,chr19	-,+,+,+,+,+	LOC100379224,ZNF226,ZNF226,ZNF226,ZNF226,ZNF226	-53437,-1614,-1580,-1580,-1580,-1512
chr19:15394166-15394542	chr19	+	15394250	15394584	True	NM_014299,NM_058243,NR_031716	chr19,chr19,chr19	-,-,+	BRD4,BRD4,MIR1470	-2988,-2988,165774
chr15:25484039-25484555	chr15	+	25484100	25484596	True	NR_003344,NR_003358,NM_130838,NR_003353,NR_003352,NR_003351,NR_003350,NR_003357,NR_003356,NR_003355,NR_003354,NR_003302,NR_003303,NR_003348,NR_003349	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,-,+,+,+,+,+,+,+,+,+,+,+,+	SNORD115-29,SNORD115-43,UBE3A,SNORD115-38,SNORD115-37,SNORD115-36,SNORD115-35,SNORD115-42,SNORD115-41,SNORD115-40,SNORD115-39,SNORD115-10,SNORD115-11,SNORD115-33,SNORD115-34	-2919,-2919,166107,388,-1018,-2919,-4757,7895,6028,4164,2296,7895,-2919,-8166,-6617
chr6:2751314-2752323	chr6	+	2751362	2752286	True	NM_001012418,NM_020135	chr6,chr6	-,+	MYLK4,WRNIP1	-208,13379
chr8:42698693-42699401	chr8	+	42698740	42699307	True	NM_199003,NM_018105,NM_032410	chr8,chr8,chr8	-,-,+	THAP1,THAP1,HOOK3	-266,-266,52725
chr11:93067875-93069201	chr11	+	93067904	93069009	True	NM_152313,NM_181645	chr11,chr11	-,+	SLC36A4,CCDC67	-136809,-4080
chr15:72610208-72611478	chr15	+	72610348	72611460	True	NM_052840,NR_027262,NM_001172684	chr15,chr15,chr15	-,+,-	CELF6,C15orf34,CELF6	1115,56993,877
chr15:67002795-67003553	chr15	+	67002816	67003588	True	NM_005585,NM_001142861,NM_207338,NR_027654	chr15,chr15,chr15,chr15	+,+,-,+	SMAD6,SMAD6,LCTL,SMAD6	-8200,-1944,-144981,-8200
chr6:112406722-112408515	chr6	+	112406774	112408398	True	NM_001033564,NM_016262	chr6,chr6	+,-	C6orf225,TUBE1	275,403
chr18:47337880-47339419	chr18	+	47338126	47339348	True	NR_003003,NM_006111	chr18,chr18	+,-	SCARNA17,ACAA2	1044,953
chr10:115508446-115509134	chr10	+	115508464	115509106	True	NM_001193435,NM_001193434,NM_024889,NM_198060	chr10,chr10,chr10,chr10	+,+,+,-	C10orf81,C10orf81,C10orf81,NRAP	2106,2106,2106,-84659
chr22:43011717-43012159	chr22	+	43011716	43012006	True	NM_178136,NR_029422,NM_032311	chr22,chr22,chr22	-,+,-	POLDIP3,RNU12,POLDIP3	-754,-516,-754
chr7:128049106-128049646	chr7	+	128049120	128049578	True	NM_000883,NM_001142576,NM_001142574,NM_001142575,NM_001142573,NM_183243,NM_001098786,NM_001102605	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,-,+,-	IMPDH1,IMPDH1,IMPDH1,IMPDH1,IMPDH1,IMPDH1,C7orf68,IMPDH1	508,508,-3096,-3096,-3096,508,46305,508
chr18:48492852-48493578	chr18	+	48493250	48493414	True	NM_018696,NM_001127174	chr18,chr18	+,-	ELAC1,MRO	972,-141496
chr22:32589568-32590862	chr22	+	32590126	32590837	True	NM_001098527,NM_006605,NM_001159545,NM_001159546,NR_033411	chr22,chr22,chr22,chr22,chr22	-,-,-,-,+	RFPL2,RFPL2,RFPL2,RFPL2,SLC5A1	8684,-660,9938,7757,-135020
chr1:151043439-151043712	chr1	+	151043446	151043522	True	NM_144618,NM_020239	chr1,chr1	+,-	GABPB2,CDC42SE1	-417,-11321
chr2:38977740-38978080	chr2	+	38977869	38978049	True	NM_001031684,NM_001195446,NM_024775	chr2,chr2,chr2	-,-,+	SRSF7,SRSF7,GEMIN6	637,637,27277
chr14:23652034-23652418	chr14	+	23652134	23652445	True	NM_012244,NM_017924	chr14,chr14	-,+	SLC7A8,C14orf119	454,-87405
chr8:43142706-43144027	chr8	+	43142707	43144054	True	NR_027669,NM_001005365,NM_001002920	chr8,chr8,chr8	-,+,+	RNF170,POTEA,POTEA	-390841,3530,3530
chr17:14140732-14141254	chr17	+	14140736	14141214	True	NM_001007530,NM_006041	chr17,chr17	-,+	CDRT15,HS3ST3B1	-586,63291
chr17:14140732-14141254	chr17	-	13926760	13927238	False	NR_003261,NM_001007530	chr17,chr17	+,-	CDRT15P,CDRT15	576,212962
chr8:144659404-144659770	chr8	+	144659495	144659641	True	NM_145201,NM_024736,NM_001100878	chr8,chr8,chr8	-,+,-	NAPRT1,GSDMD,C8orf73	922,-19069,-4567
chr17:79934891-79935136	chr17	+	79934894	79935030	True	NM_178493,NM_024083	chr17,chr17	-,+	NOTUM,ASPSCR1	-15837,395
chr9:31915687-31916270	chr9	+	31915780	31916198	True	NM_014314,NM_002197	chr9,chr9	-,+	DDX58,ACO1	610186,468402
chr20:44485818-44486026	chr20	+	44485826	44486064	True	NM_005469,NR_037628,NM_080752	chr20,chr20,chr20	-,+,+	ACOT8,ZSWIM3,ZSWIM3	34,155,155
chr8:145548584-145549595	chr8	+	145548969	145549573	True	NM_024531,NM_012079	chr8,chr8	+,-	GPR172A,DGAT1	32651,1044
chr6:170149488-170151481	chr6	+	170149560	170151221	True	NM_018341,NM_174910	chr6,chr6	+,-	C6orf70,TCTE3	499,472
chr10:106096314-106097305	chr10	+	106096332	106097171	True	NM_001008723,NM_033397	chr10,chr10	+,-	CCDC147,ITPRIP	16350,-2669
chr19:14248934-14249335	chr19	+	14249215	14249373	True	NR_024282,NM_018154	chr19,chr19	+,-	LOC113230,ASF1B	-65445,-1775
chr11:57095845-57097706	chr11	+	57096260	57097542	True	NM_002559,NM_003146,NM_033396	chr11,chr11,chr11	+,-,-	P2RX3,SSRP1,TNKS1BP1	8406,5860,-3847
chr2:198379254-198380240	chr2	+	198379492	198380272	True	NM_199482,NM_015387,NM_001100819,NM_199440,NM_001204094	chr2,chr2,chr2,chr2,chr2	+,+,+,-,+	MOBKL3,MOBKL3,MOBKL3,HSPD1,MOBKL3	22,494,494,-14494,749
chr17:80026103-80026994	chr17	+	80026271	80026886	True	NM_212492,NM_022156	chr17,chr17	+,-	GPS1,DUS1L	-16566,-2591
chr12:53143141-53143359	chr12	+	53143232	53143310	True	NM_199187,NM_015848	chr12,chr12	+,-	KRT18,KRT76	199344,27885
chr17:78235738-78236860	chr17	+	78235921	78236833	True	NM_000199,NM_020914,NM_020954	chr17,chr17,chr17	-,+,+	SGSH,RNF213,RNF213	-41722,-1305,-1305
chr2:211442991-211443757	chr2	+	211443187	211443779	True	NM_001136575,NM_001122634	chr2,chr2	-,+	LANCL1,CPS1	-101688,14299
chr11:60720362-60721810	chr11	+	60720522	60721577	True	NR_027391,NM_006725,NM_016582	chr11,chr11,chr11	-,+,-	SLC15A3,CD6,SLC15A3	-1265,17537,-1265
chr7:72426148-72427689	chr7	+	72426154	72427142	True	NR_033323,NR_003602	chr7,chr7	-,+	NSUN5P2,LOC541473	-852,13049
chr7:72426148-72427689	chr7	-	75037762	75038744	False	NR_003614,NR_033322	chr7,chr7	-,+	PMS2L2,NSUN5P1	-49547,879
chr6:7103234-7104488	chr6	+	7103689	7103828	True	NM_001003700,NM_001003699,NM_001003698,NM_001168344,NM_003144	chr6,chr6,chr6,chr6,chr6	+,+,+,+,-	RREB1,RREB1,RREB1,RREB1,SSR1	4257,4257,4257,4001,209770
chr13:60579773-60581275	chr13	+	60580388	60581140	True	NM_030932,NM_001146071	chr13,chr13	-,+	DIAPH3,TDRD3	6254,389450
chr19:49467237-49467924	chr19	+	49467398	49467924	True	NM_000146,NM_004324,NM_138764,NM_001161587,NM_138763,NM_138761,NR_027882	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,-,+,+,+	FTL,BAX,BAX,GYS1,BAX,BAX,BAX	641,-9332,-9332,28736,-9332,-9332,-9332
chr2:220070107-220070502	chr2	+	220070161	220070287	True	NM_138802,NM_005689	chr2,chr2	+,-	ZFAND2B,ABCB6	1250,13481
chr1:150480616-150481111	chr1	+	150480700	150481156	True	NM_004425,NM_001202858,NM_001197320,NM_022664	chr1,chr1,chr1,chr1	+,+,-,+	ECM1,ECM1,MCL1,ECM1	-264,-264,71108,-264
chr13:113302717-113303314	chr13	+	113302782	113303271	True	NM_207440,NM_006322	chr13,chr13	+,-	C13orf35,TUBGCP3	-1483,-60301
chr20:36789927-36790888	chr20	+	36789965	36790896	True	NM_004613,NM_021215,NM_198951	chr20,chr20,chr20	-,+,-	TGM2,RPRD1B,TGM2	2860,-128068,2860
chr5:171882567-171882849	chr5	+	171882570	171882846	True	NM_001017995,NM_001142651	chr5,chr5	-,+	SH3PXD2B,NEURL1B	-1043,185429
chr9:70857469-70857911	chr2	+	114196230	114196285	True	NM_172003,NM_013992	chr2,chr2	+,-	CBWD2,PAX8	-1018,-159732
chr9:70857469-70857911	chr9	+	70857468	70857787	False	NR_015423,NM_201453	chr9,chr9	-,+	LOC572558,CBWD3	115025,-680
chr9:70857469-70857911	chr9	-	178129	178184	False	NM_001145356,NM_001145355,NM_203447,NM_018491	chr9,chr9,chr9,chr9	-,-,+,-	CBWD1,CBWD1,DOCK8,CBWD1	946,946,36680,946
chr9:70857469-70857911	chr9	-	69261647	69261966	False	NM_001085457,NM_001098805	chr9,chr9	-,+	CBWD6,ANKRD20A4	677,120014
chr12:6962629-6962975	chr12	+	6962666	6962975	True	NM_003481,NM_001098536,NM_031299	chr12,chr12,chr12	+,+,-	USP5,USP5,CDCA3	-1426,-1432,-2210
chr7:73255556-73255893	chr7	+	73255665	73255805	True	NM_001305,NM_152559	chr7,chr7	+,-	CLDN4,WBSCR27	-10523,1100
chr6:25753102-25753730	chr6	+	25753296	25753695	True	NM_170745,NM_005495	chr6,chr6	-,+	HIST1H2AA,SLC17A4	-26506,1231
chr19:45736396-45737206	chr19	+	45736619	45737193	True	NM_001199867,NM_138568	chr19,chr19	+,-	MARK4,EXOC3L2	17322,326
chr19:58325395-58325854	chr19	+	58325409	58325772	True	NM_001204818,NM_024762	chr19,chr19	+,-	LOC100293516,ZNF552	15889,562
chr19:53397584-53397950	chr19	+	53397665	53397819	True	NM_152473,NM_207333	chr19,chr19	+,-	HERV-V1,ZNF320	119524,-3066
chr20:30072181-30072397	chr20	+	30072184	30072372	True	NR_024358,NM_001037500,NM_014012	chr20,chr20,chr20	+,-,+	NCRNA00028,DEFB124,REM1	1208,-11368,-9130
chr8:37962650-37962886	chr8	+	37962666	37962820	True	NM_004674,NM_000349,NM_001105214	chr8,chr8,chr8	+,-,+	ASH2L,STAR,ASH2L	190,45830,528
chrX:73642124-73642366	chrX	+	73642127	73642239	True	NM_006517,NR_028379	chrX,chrX	+,-	SLC16A2,MIR374AHG	-1093,-128718
chr8:8751419-8751740	chr8	+	8751500	8751704	True	NM_153332,NM_004225	chr8,chr8	+,-	ERI1,MFHAS1	108609,-369
chr18:47791035-47792339	chr18	+	47791145	47792257	True	NM_145020,NM_001039535	chr18,chr18	-,+	CCDC11,SKA1	658,109134
chr9:14313533-14313796	chr9	+	14313532	14313770	True	NM_005596,NR_003920,NM_001190737	chr9,chr9,chr9	-,+,-	NFIB,LOC389705,NFIB	325,679554,325
chr16:67279754-67279965	chr16	+	67279753	67279961	True	NM_013241,NM_004594	chr16,chr16	-,+	FHOD1,SLC9A5	1514,2893
chr16:12020098-12020516	chr16	+	12020226	12020302	True	NM_001192,NM_001130007	chr16,chr16	+,-	TNFRSF17,GSPT1	38661,-9707
chr9:100747392-100747614	chr9	+	100747499	100747573	True	NM_018437,NM_006401	chr9,chr9	-,+	HEMGN,ANP32B	-40365,-2061
chr12:111290518-111291291	chr12	+	111290726	111291096	True	NM_152591,NM_000432	chr12,chr12	+,-	CCDC63,MYL2	-5966,67358
chr11:131170573-131171386	chr11	+	131170715	131171312	True	NM_001048209,NM_014758	chr11,chr11	+,-	NTM,SNX19	69058,-384333
chr22:38611687-38612073	chr22	+	38611722	38612091	True	NM_001161573,NM_001199562	chr22,chr22	+,-	MAFF,PLA2G6	-12746,-33886
chr20:39656168-39656878	chr20	+	39656343	39656867	True	NM_015035,NM_003286	chr20,chr20	-,+	ZHX3,TOP1	271922,594
chr16:29825703-29826201	chr16	+	29825742	29826198	True	NM_017458,NM_024516,NM_005115,NM_006319,NM_145239,NM_001042539,NM_002383	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,-,+,+,+	MVP,C16orf53,MVP,CDIPT,PRRT2,MAZ,MAZ	5516,1329,5516,48430,-2384,-7938,-7938
chr6:44100372-44101420	chr6	+	44100406	44101136	True	NM_018426,NM_032111	chr6,chr6	+,-	TMEM63B,MRPL14	-5081,-5215
chr1:151736637-151738340	chr1	+	151736685	151738146	True	NM_016178,NM_001134939,NM_031420	chr1,chr1,chr1	+,+,-	OAZ3,OAZ3,MRPL9	984,-1292,-645
chr3:126704774-126705071	chr3	+	126704874	126705034	True	NM_032242,NM_052883	chr3,chr3	+,-	PLXNA1,TXNRD3	2402,-330907
chr10:32761060-32761817	chr10	+	32761060	32761481	True	NM_025209,NM_145023	chr10,chr10	-,+	EPC1,CCDC7	-124947,-26078
chr16:30933205-30933415	chr16	+	30933284	30933356	True	NM_001099784,NR_024348	chr16,chr16	+,-	FBXL19,FBXL19-AS1	2539,1284
chr16:20553095-20554328	chr16	+	20553325	20554343	True	NM_001105069,NM_001010845	chr16,chr16	-,+	ACSM2B,ACSM2A	33402,-90524
chr16:20553095-20554328	chr16	-	20492924	20493153	False	NM_174924,NM_001010845	chr16,chr16	-,+	PDILT,ACSM2A	-76891,-30123
chr15:42650964-42652053	chr15	+	42651101	42652037	True	NM_173087,NM_000070,NM_024344,NM_001110503	chr15,chr15,chr15,chr15	+,+,+,-	CAPN3,CAPN3,CAPN3,TMEM87A	-163,-163,-163,-85346
chr11:118797594-118799192	chr11	+	118797690	118799043	True	NM_006760,NM_182557	chr11,chr11	+,-	UPK2,BCL9L	27964,-16077
chr1:43124316-43124909	chr1	+	43124494	43124942	True	NM_006347,NM_001123395	chr1,chr1	+,-	PPIH,CLDN19	-497,81033
chr1:203830194-203830582	chr1	+	203830488	203830618	True	NM_003094,NR_027902	chr1,chr1	+,-	SNRPE,C1orf157	121,179824
chr16:33728080-33728428	chr16	+	33728206	33728446	True	NR_033866,NM_001205265	chr16,chr16	-,+	LOC390705,TP53TG3B	-429504,-466137
chr16:33728080-33728428	chr16	-	32939169	32939409	False	NR_003083,NM_016212	chr16,chr16	-,+	SLC6A10P,TP53TG3	-42706,265570
chr16:33728080-33728428	chr16	-	31995617	31995857	False	NR_002827,NM_003414	chr16,chr16	-,+	HERC2P4,ZNF267	168067,-110589
chr9:132389475-132389752	chr9	+	132389575	132389803	True	NM_199350,NM_014064	chr9,chr9	-,+	C9orf50,METTL11A	-6520,-1191
chr5:10611723-10612159	chr5	+	10611800	10612085	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-47423,149353
chr6:108396238-108396580	chr6	+	108396248	108396560	True	NM_003269,NM_014028	chr6,chr6	+,-	NR2E1,OSTM1	90654,-307
chr7:138144770-138145054	chr7	+	138144803	138145103	True	NM_174959,NM_015905,NM_003852	chr7,chr7,chr7	-,+,+	SVOPL,TRIM24,TRIM24	203916,-25,-25
chr12:103351186-103351441	chr12	+	103351196	103351465	True	NM_000277,NM_004316	chr12,chr12	-,+	PAH,ASCL1	-39815,-14
chr20:1534879-1535380	chr20	+	1534881	1535368	True	NM_014723,NM_178460	chr20,chr20	+,-	SNPH,SIRPD	-287972,3026
chr2:132217656-132218262	chr2	+	132217852	132218293	True	NR_002826,NM_080386	chr2,chr2	-,+	LOC401010,TUBA3D	-15385,15372
chr2:132217656-132218262	chr2	-	130971721	130971775	False	NM_025029,NM_207312	chr2,chr2	+,-	MZT2B,TUBA3E	-32273,-15687
chr21:44898788-44898995	chr21	+	44898883	44899017	True	NR_026960,NR_026863	chr21,chr21	+,-	C21orf125,C21orf84	-29030,-780
chr3:48508270-48510027	chr3	+	48508323	48509997	True	NM_033629,NM_024661,NM_016381	chr3,chr3,chr3	+,-,+	TREX1,CCDC51,TREX1	-1145,-26794,-1145
chr21:14407464-14408451	chr21	+	14408030	14408400	True	NR_026916,NR_036164	chr21,chr21	+,-	ANKRD30BP2,MIR3156-3	2086,370441
chr12:42532762-42533905	chr12	+	42533182	42533668	True	NM_173601,NM_001099650,NM_201438	chr12,chr12,chr12	-,-,+	GXYLT1,GXYLT1,PPHLN1	5061,5061,186278
chr1:144340124-144340415	chr1	+	144340125	144340237	True	NR_024584,NM_001037675,NR_024510,NR_024511	chr1,chr1,chr1,chr1	-,+,-,-	LOC728875,NBPF9,LOC728855,LOC728855	1568,274721,586,586
chr1:144340124-144340415	chr1	+	147931323	147931373	False	NM_001097616,NR_027468	chr1,chr1	+,-	GPR89C,FLJ39739	-505807,657
chr1:144340124-144340415	chr1	+	143743800	143743850	False	NR_033189,NR_027469,NR_027468	chr1,chr1,chr1	+,-,-	LOC100130000,LOC100286793,FLJ39739	-56721,787,657
chr1:144340124-144340415	chr1	+	144520373	144520423	False	NR_024584,NM_001037675	chr1,chr1	-,+	LOC728875,NBPF9	1596,94535
chr2:84784748-84785471	chr2	+	84784852	84785037	True	NM_003849,NM_001370	chr2,chr2	-,+	SUCLG1,DNAH6	-98266,-41333
chr3:149045030-149046628	chr3	+	149045129	149046645	True	NM_001184723,NM_004617,NM_138786	chr3,chr3,chr3	-,+,-	TM4SF18,TM4SF4,TM4SF18	4664,145722,4953
chr1:171650137-171652051	chr1	+	171650137	171651393	True	NM_001007239,NM_000261	chr1,chr1	+,-	METTL13,MYOC	99367,-28364
chr17:33898857-33899333	chr17	+	33898973	33899208	True	NR_003037,NM_000286	chr17,chr17	+,-	SNORD7,PEX12	1467,6499
chr7:39648059-39649264	chr7	+	39648112	39649242	True	NM_138701,NR_024390	chr7,chr7	-,+	C7orf11,LOC646999	525059,61
chr11:45826854-45827401	chr11	+	45826911	45827323	True	NM_018389,NM_001145266,NM_001145265,NM_001080446	chr11,chr11,chr11,chr11	+,+,+,-	SLC35C1,SLC35C1,SLC35C1,C11orf94	-321,-1339,-1339,101560
chr7:156111832-156112379	chr7	+	156111869	156112377	True	NR_026865,NR_024119	chr7,chr7	-,+	C7orf13,NCRNA00244	321021,220807
chr1:39496314-39497021	chr1	+	39496430	39496551	True	NM_001184979,NM_017821,NM_004552	chr1,chr1,chr1	+,-,+	NDUFS5,RHBDL2,NDUFS5	-4520,-88974,-4520
chr20:24931319-24931729	chr20	+	24931330	24931722	True	NM_003650,NM_020531	chr20,chr20	+,-	CST7,C20orf3	-1515,41753
chr8:124217696-124217902	chr8	+	124217702	124217902	True	NR_024479,NM_207006	chr8,chr8	-,+	LOC100131726,FAM83A	-2719,-23001
chr10:127350420-127350741	chr10	+	127350487	127350760	True	NR_033848,NM_001128202	chr10,chr10	+,-	LOC283038,C10orf122	21051,21004
chr17:42838036-42838464	chr17	+	42838148	42838350	True	NM_005497,NM_002390	chr17,chr17	-,+	GJC1,ADAM11	69307,-1631
chr19:19142197-19143750	chr19	+	19142548	19143671	True	NM_001017392,NM_001199196,NM_033415,NM_014884	chr19,chr19,chr19,chr19	-,+,+,-	SUGP2,ARMC6,ARMC6,SUGP2	760,715,715,760
chr17:73933958-73934558	chr17	+	73933985	73934325	True	NM_001080542,NM_001113324	chr17,chr17	-,+	FBF1,C17orf106	2844,40972
chr7:57079197-57079505	chr7	+	57079278	57079484	True	NR_036270,NR_036102	chr7,chr7	-,+	MIR4283-2,MIR3147	-55707,393246
chr7:57079197-57079505	chr7	-	5345112	5345169	False	NM_153247,NM_001080495	chr7,chr7	+,-	SLC29A4,TNRC18	-22609,118065
chr7:57079197-57079505	chr7	-	63025601	63025682	False	NR_028349,NR_036246	chr7,chr7	-,+	LOC100287834,MIR4283-1	-166182,55785
chr13:27750843-27751705	chr13	+	27750993	27751387	True	NM_000982,NM_182488	chr13,chr13	+,-	RPL21,USP12	74304,-4960
chr19:33359272-33359727	chr19	+	33359335	33359725	True	NM_014270,NM_001126335,NM_152266	chr19,chr19,chr19	-,-,+	SLC7A9,SLC7A9,C19orf40	1008,1008,103422
chr1:166845652-166846141	chr1	+	166845682	166846174	True	NM_017542,NM_053053	chr1,chr1	+,-	POGK,TADA1	-37009,-28
chr12:6772437-6773101	chr12	+	6772471	6772977	True	NM_001127586,NM_001164094,NM_001127584,NM_001127585,NM_001127582,NM_001127583,NM_016162	chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,+,-,-,-,-,-	ING4,COPS7A,ING4,ING4,ING4,ING4,ING4	-163,60172,-163,-163,-163,-163,-163
chr16:11760245-11760591	chr16	+	11760351	11760554	True	NM_003498,NM_015914	chr16,chr16	+,-	SNN,TXNDC11	1734,76153
chr2:61992317-61993627	chr2	+	61992543	61993394	True	NM_001201543,NM_152516	chr2,chr2	-,+	FAM161A,COMMD1	87934,139408
chr3:155858218-155858627	chr3	+	155858244	155858632	True	NM_003471,NM_004733	chr3,chr3	+,-	KCNAB1,SLC33A1	2118,-285996
chr8:11058242-11058502	chr8	+	11058268	11058488	True	NM_173683,NM_015458	chr8,chr8	-,+	XKR6,MTMR9	437,83511
chr11:2322070-2322541	chr11	+	2322163	2322589	True	NM_139022,NM_001142946,NR_024621	chr11,chr11,chr11	+,-,-	TSPAN32,C11orf21,C11orf21	653,604,604
chr17:66016522-66017054	chr17	+	66016620	66017063	True	NM_002266,NM_181656	chr17,chr17	+,-	KPNA2,C17orf58	14784,-26855
chr19:38068586-38068787	chr19	+	38068697	38068783	True	NM_001172225,NM_016536	chr19,chr19	+,-	ZNF540,ZNF571	16947,16944
chr12:49298097-49298349	chr12	+	49298214	49298400	True	NM_001143781,NM_033124	chr12,chr12	-,+	FKBP11,CCDC65	20316,-372
chr11:61196292-61196537	chr11	+	61196333	61196581	True	NM_001136040,NM_001142565,NM_017841,NM_024811	chr11,chr11,chr11,chr11	-,-,+,-	CPSF7,CPSF7,SDHAF2,CPSF7	933,933,1015,852
chr1:175014904-175015720	chr1	+	175014964	175015368	True	NR_037606,NM_022093	chr1,chr1	-,+	MRPS14,TNN	-22373,21625
chr10:45797413-45799029	chr10	+	45797488	45799068	True	NM_001004297,NM_000698	chr10,chr10	-,+	OR13A1,ALOX5	12038,70560
chr9:125668732-125669498	chr9	+	125668836	125669157	True	NM_012197,NM_018835,NM_001100588,NM_006626	chr9,chr9,chr9,chr9	+,-,-,-	RABGAP1,RC3H2,RC3H2,ZBTB6	34130,-1274,-1274,6509
chr1:244624139-244624519	chr1	+	244624234	244624544	True	NM_173807,NM_001126,NM_001130957	chr1,chr1,chr1	+,-,+	C1orf101,ADSS,C1orf101	128,-8798,128
chr6:168419689-168420276	chr6	+	168419693	168420271	True	NM_030615,NM_005355,NM_001129895	chr6,chr6,chr6	+,+,-	KIF25,KIF25,HGC6.3	-1191,-1191,-42074
chr15:62934991-62936036	chr15	+	62935218	62936078	True	NM_015059,NR_026897	chr15,chr15	+,-	TLN2,MGC15885	3431,1352
chr11:61384870-61386209	chr11	+	61385035	61386168	True	NM_004200,NR_002775	chr11,chr11	-,+	SYT7,RPLP0P2	-36737,-2578
chr17:41065112-41065993	chr17	+	41065117	41066010	True	NR_027254,NM_000151	chr17,chr17	-,+	LOC388387,G6PC	-14366,-12353
chr17:34057290-34058399	chr17	+	34057650	34058218	True	NM_033315,NM_139285	chr17,chr17	+,-	RASL10B,GAS2L2	460,21729
chr1:67338689-67339087	chr1	+	67338688	67338847	True	NM_001077700,NM_024763	chr1,chr1	+,-	MIER1,WDR78	51730,51782
chr1:3688377-3688589	chr1	+	3688397	3688635	True	NR_033711,NM_001163724,NM_020710	chr1,chr1,chr1	-,+,-	KIAA0495,LOC388588,LRRC47	-24460,716,24483
chr1:65730349-65730550	chr1	+	65730349	65730569	True	NR_029516,NM_014787	chr1,chr1	-,+	MIR101-1,DNAJC6	-206158,30
chrX:109659725-109661381	chrX	+	109659920	109661384	True	NM_020769,NM_001171689	chrX,chrX	+,-	RGAG1,AMMECR1	900,22127
chr5:140621509-140621752	chr5	+	140621689	140621802	True	NM_018935,NR_001282,NR_001281,NM_031947	chr5,chr5,chr5,chr5	+,+,+,-	PCDHB15,PCDHB19P,PCDHB18,SLC25A2	3344,-2051,-7802,61861
chr15:43808454-43809006	chr15	+	43808569	43809023	True	NM_002373,NM_005657	chr15,chr15	+,-	MAP1A,TP53BP1	782,-5862
chr18:49140494-49141612	chr18	+	49140507	49141533	True	NM_005359,NM_016626	chr18,chr18	+,-	SMAD4,MEX3C	-583975,-416456
chr3:158784682-158784982	chr3	+	158784723	158785017	True	NM_002888,NM_001042706,NM_001042705,NM_001197100,NM_001197113,NM_001197114	chr3,chr3,chr3,chr3,chr3,chr3	-,+,+,+,+,+	RARRES1,IQCJ,IQCJ,IQCJ,IQCJ-SCHIP1,IQCJ-SCHIP1	-334448,2023,2023,2023,2023,2023
chr11:73716336-73716947	chr11	+	73716530	73716886	True	NM_022803,NM_003356,NM_153614	chr11,chr11,chr11	-,-,+	UCP3,UCP3,DNAJB13	3446,3446,-55217
chr11:20385935-20387182	chr11	+	20386009	20387220	True	NM_001029865,NM_006410,NM_001098521,NM_001098520,NM_001098523,NM_001098522	chr11,chr11,chr11,chr11,chr11,chr11	-,+,+,+,+,+	DBX1,HTATIP2,HTATIP2,HTATIP2,HTATIP2,HTATIP2	-204139,-829,-813,-771,-373,-657
chr19:43894146-43894710	chr19	+	43894168	43894494	True	NM_031451,NM_014400	chr19,chr19	+,-	TEX101,LYPD3	-1456,75387
chr21:34172174-34172847	chr21	+	34172441	34172793	True	NM_001162495,NR_024623	chr21,chr21	-,+	C21orf62,C21orf49	13320,-28082
chr3:73670020-73670654	chr3	+	73670122	73670404	True	NM_018029,NM_015009	chr3,chr3	+,-	EBLN2,PDZRN3	-559364,3718
chr19:45873594-45873802	chr19	+	45873786	45873846	True	NM_001130867,NM_177417,NM_000400	chr19,chr19,chr19	-,+,-	ERCC2,KLC3,ERCC2	49,-29839,49
chr19:56185852-56186187	chr19	+	56185873	56186121	True	NM_001130072,NM_203374,NM_001130071,NM_013333	chr19,chr19,chr19,chr19	+,-,+,+	EPN1,ZNF784,EPN1,EPN1	439,-49932,1869,439
chr2:219743107-219743858	chr2	+	219743130	219743870	True	NM_017431,NM_025216	chr2,chr2	-,+	PRKAG3,WNT10A	-46618,1384
chr6:116637075-116638406	chr6	+	116637412	116638388	True	NM_003309,NM_001080976	chr6,chr6	-,+	TSPYL1,DSE	-36132,-36191
chr16:20804713-20805297	chr16	+	20804905	20805286	True	NM_080663,NM_001144924	chr16,chr16	-,+	ERI2,LOC81691	12560,12480
chr1:156613515-156613785	chr1	+	156613517	156613681	True	NM_198427,NM_006617,NM_021948	chr1,chr1,chr1	+,-,+	BCAN,NES,BCAN	-1828,33558,-1828
chr5:95296039-95296290	chr5	+	95296136	95296202	True	NR_026936,NM_012081	chr5,chr5	+,-	C5orf27,ELL2	-108251,1623
chr1:246729328-246729534	chr1	+	246729332	246729582	True	NM_152609,NM_001139459,NM_022366	chr1,chr1,chr1	+,+,-	CNST,CNST,TFB2M	56,56,33
chr14:81861186-81862214	chr14	+	81861185	81862193	True	NM_033104,NM_000369	chr14,chr14	-,+	STON2,TSHR	2784,-439378
chr7:23287658-23288689	chr7	+	23287784	23288176	True	NM_006547,NM_001005340,NM_002510	chr7,chr7,chr7	-,+,+	IGF2BP3,GPNMB,GPNMB	221871,-1519,-1519
chr9:43032376-43032651	chr9	+	43032478	43032538	True	NR_026759,NR_026558	chr9,chr9	-,+	FAM95B1,AQP7P3	824,-174377
chr9:43032376-43032651	chr9	-	42469362	42469422	False	NR_003670,NR_026759	chr9,chr9	-,+	KGFLP2,FAM95B1	-449778,-824
chr9:43032376-43032651	chr9	-	69476790	69477213	False	NM_001085457,NM_001098805	chr9,chr9	-,+	CBWD6,ANKRD20A4	-214197,-94860
chr1:115057708-115058631	chr1	+	115057749	115058213	True	NM_003176,NM_015906,NM_033020	chr1,chr1,chr1	+,-,-	SYCP1,TRIM33,TRIM33	339241,-3968,-3968
chr2:182557751-182559191	chr2	+	182557770	182559240	True	NM_002500,NM_001130445	chr2,chr2	-,+	NEUROD1,SSFA2	-12378,197231
chr12:6959431-6960153	chr12	+	6959480	6959962	True	NM_003481,NM_001098536,NM_031299	chr12,chr12,chr12	+,+,-	USP5,USP5,CDCA3	1328,1322,544
chr2:215894067-215895038	chr2	+	215894180	215894916	True	NM_004044,NM_015657	chr2,chr2	+,-	ATIC,ABCA12	281762,1944
chr3:2946343-2947048	chr3	+	2946342	2946945	True	NM_000564,NM_182916	chr3,chr3	-,+	IL5RA,TRNT1	205163,221654
chr15:50716804-50717019	chr15	+	50716808	50717009	True	NM_005154,NM_181427,NM_001128611,NM_001128610	chr15,chr15,chr15,chr15	+,-,+,+	USP8,GABPB1,USP8,USP8	-280,-69203,-280,-280
chr13:20356327-20356552	chr13	+	20356383	20356601	True	NM_001042414,NM_017520,NR_003272	chr13,chr13,chr13	-,+,-	PSPC1,MPHOSPH8,PSPC1	532,-148646,532
chr10:48361773-48362029	chr10	+	48361822	48362072	True	NM_002900,NM_153034	chr10,chr10	-,+	RBP3,ZNF488	28969,-6784
chr19:47986257-47986580	chr19	+	47986257	47986609	True	NM_015711,NM_007059	chr19,chr19	+,-	GLTSCR1,KPTN	124843,962
chr7:150945625-150945899	chr7	+	150945852	150945912	True	NR_030407,NM_001003801	chr7,chr7	+,-	MIR671,SMARCD3	-10396,-103
chr2:128456247-128456635	chr2	+	128456327	128456645	True	NM_032740,NM_001161404	chr2,chr2	+,-	SFT2D3,LIMS2	1951,-16967
chr7:128472526-128472839	chr7	+	128472782	128472842	True	NM_001127487,NM_001708,NM_001458	chr7,chr7,chr7	+,-,+	FLNC,OPN1SW,FLNC	-2350,-56938,-2350
chr3:45187103-45187310	chr3	+	45187214	45187318	True	NM_022842,NM_178181,NM_003278	chr3,chr3,chr3	-,-,+	CDCP1,CDCP1,CLEC3B	646,646,-119506
chr17:41058314-41058932	chr17	+	41058416	41058981	True	NR_027254,NM_000151	chr17,chr17	-,+	LOC388387,G6PC	-7665,-5652
chr11:83953607-83955317	chr11	+	83953899	83955105	True	NM_182603,NM_001142700	chr11,chr11	+,-	ANKRD42,DLG2	-1048659,29268
chr12:123705524-123706084	chr12	+	123705618	123706120	True	NM_022782,NM_152269	chr12,chr12	-,+	MPHOSPH9,C12orf65	371,11723
chr17:72889872-72890480	chr17	+	72890086	72890510	True	NM_178128,NM_178160	chr17,chr17	-,+	FADS6,OTOP2	-381,29859
chr5:10618635-10619985	chr5	+	10618713	10619793	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-54329,141644
chr3:46735854-46736578	chr3	+	46735922	46736484	True	NM_001190707,NM_147196,NR_033815,NM_147129	chr3,chr3,chr3,chr3	-,+,-,-	ALS2CL,TMIE,ALS2CL,ALS2CL	-776,6338,-728,-728
chr10:698417-698642	chr10	+	698439	698635	True	NR_027152,NR_027151,NM_014974	chr10,chr10,chr10	+,+,-	C10orf108,C10orf108,DIP2C	-2473,-2602,37023
chr16:85205819-85206153	chr16	+	85205822	85206186	True	NR_033984,NM_198491	chr16,chr16	+,-	LOC400548,FAM92B	-35117,-59708
chr22:50218881-50219679	chr22	+	50219015	50219567	True	NM_014838,NM_014577	chr22,chr22	+,-	ZBED4,BRD1	27929,-563
chr11:35085345-35086235	chr11	+	35085431	35086235	True	NM_015957,NM_001202557	chr11,chr11	-,+	APIP,CD44	-147492,74181
chr18:8359763-8361335	chr18	+	8359771	8361365	True	NM_001025300,NR_024419	chr18,chr18	+,-	RAB12,LOC100192426	248077,5717
chr17:74264033-74264783	chr17	+	74264122	74264334	True	NM_052916,NM_182565	chr17,chr17	-,+	RNF157,FAM100B	-27732,-2895
chr12:7038150-7038440	chr12	+	7038157	7038421	True	NM_001940,NM_001007026,NR_003010	chr12,chr12,chr12	+,+,-	ATN1,ATN1,SCARNA12	-728,-4582,38398
chr20:62183568-62183922	chr20	+	62183718	62183780	True	NM_024059,NM_080823	chr20,chr20	+,-	C20orf195,SRMS	592,-4861
chr16:29834325-29835086	chr16	+	29834358	29834898	True	NM_006319,NM_024516,NM_017458,NM_005115	chr16,chr16,chr16,chr16	-,+,+,+	CDIPT,C16orf53,MVP,MVP	39730,-6881,-2694,-2694
chr12:121031939-121032167	chr12	+	121031973	121032204	True	NM_001033677,NM_198202	chr12,chr12	+,-	CABP1,POP5	46217,-12772
chr17:34594294-34595446	chr17	+	34594320	34595466	True	NM_001001435,NM_001001418	chr17,chr17	+,-	CCL4L1,TBC1D3C	44567,-2293
chr17:34594294-34595446	chr17	-	36280626	36281678	False	NM_032258,NR_024178,NM_001123391	chr17,chr17,chr17	+,-,+	TBC1D3F,LOC284100,TBC1D3	2281,-36263,2281
chr17:34594294-34595446	chr17	+	34506276	34507332	False	NM_001001417,NM_001001435	chr17,chr17	-,+	TBC1D3B,CCL4L1	-2288,31135
chr17:34594294-34595446	chr17	+	34810384	34811432	False	NM_001001418,NM_004773,NM_001040282	chr17,chr17,chr17	-,+,-	TBC1D3C,ZNHIT3,TBC1D3G	-2293,31040,-2281
chr17:34594294-34595446	chr17	+	34759329	34760381	False	NM_001123392,NM_004773	chr17,chr17	-,+	TBC1D3H,ZNHIT3	-2279,82091
chr5:27006668-27008322	chr5	+	27006726	27008205	True	NR_033961,NM_016279	chr5,chr5	+,-	LOC729862,CDH9	1918771,30545
chr1:156550428-156551185	chr1	+	156550559	156551059	True	NM_178229,NM_001105669	chr1,chr1	-,+	IQGAP3,TTC24	-8163,-1098
chr3:46063691-46065532	chr3	+	46063969	46065492	True	NM_005283,NM_001024644,NM_006564	chr3,chr3,chr3	-,-,+	XCR1,XCR1,CXCR6	3538,3538,-79055
chr15:76005220-76005450	chr15	+	76005287	76005437	True	NM_175881,NM_001897	chr15,chr15	+,-	ODF3L1,CSPG4	10881,-98
chr8:16884177-16884502	chr8	+	16884187	16884539	True	NM_181723,NM_019851	chr8,chr8	+,-	EFHA2,FGF20	207,-24513
chr6:74019220-74019514	chr6	+	74019261	74019497	True	NM_001017361,NR_027005	chr6,chr6	+,-	C6orf221,C6orf147	52902,641
chr1:154245264-154245477	chr1	+	154245307	154245455	True	NM_001018837,NM_138740,NM_006118	chr1,chr1,chr1	+,-,+	HAX1,C1orf43,HAX1	-320,-52034,-320
chr2:85662057-85662283	chr2	+	85662160	85662318	True	NM_001747,NM_198482	chr2,chr2	-,+	CAPG,SH2D6	-24484,-293
chr21:38580127-38580579	chr21	+	38580196	38580558	True	NM_006052,NR_026719	chr21,chr21	-,+	DSCR3,DSCR9	59325,396
chr5:141344337-141344976	chr5	+	141344530	141344908	True	NM_183399,NM_183398,NM_001201365,NM_016580,NM_183401,NM_183400,NM_004290	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,-,+,+,+	RNF14,RNF14,RNF14,PCDH12,RNF14,RNF14,RNF14	1493,3542,1493,-5903,3803,3542,3542
chr5:88178221-88178730	chr5	+	88178246	88178720	True	NM_006467,NM_002397,NM_001193350	chr5,chr5,chr5	+,-,-	POLR3G,MEF2C,MEF2C	1591960,615,615
chr1:35487962-35489344	chr1	+	35488156	35489120	True	NM_024772,NM_007167	chr1,chr1	+,-	ZMYM1,ZMYM6	55851,8509
chr6:74063391-74063630	chr6	+	74063612	74063678	True	NM_001017361,NM_001025290	chr6,chr6	+,-	C6orf221,DPPA5	8721,371
chr1:10001848-10002717	chr1	+	10001876	10002765	True	NM_032368,NM_022787	chr1,chr1	-,+	LZIC,NMNAT1	111,720
chr12:57398629-57399741	chr12	+	57398676	57399565	True	NM_007264,NM_014830	chr12,chr12	+,-	GPR182,ZBTB39	-10373,790
chr17:7307741-7308001	chr17	+	7307768	7307844	True	NM_152766,NR_037719,NM_020795,NM_001201576,NM_020360	chr17,chr17,chr17,chr17,chr17	-,-,+,-,-	C17orf61,C17orf61-PLSCR3,NLGN2,PLSCR3,PLSCR3	-318,-318,3657,-9606,-9606
chr6:40552652-40553740	chr6	+	40552764	40553708	True	NR_024015,NM_020737	chr6,chr6	+,-	TDRG1,LRFN2	-206652,1468
chr7:100492840-100493077	chr7	+	100492880	100492950	True	NM_000665,NM_015908,NM_015831,NM_001015072	chr7,chr7,chr7,chr7	-,+,-,-	ACHE,SRRT,ACHE,UFSP1	641,-20230,641,-5541
chr15:80264704-80266561	chr15	+	80264775	80266332	True	NM_001114735,NR_028330,NM_004049	chr15,chr15,chr15	-,+,-	BCL2A1,C15orf37,BCL2A1	-1132,-49713,-1132
chr21:43620370-43622264	chr21	+	43620492	43622300	True	NR_027243,NM_207627,NM_207628	chr21,chr21,chr21	-,+,+	C21orf128,ABCG1,ABCG1	-91848,-744,-621
chr9:116323161-116324927	chr9	+	116323236	116324909	True	NM_017443,NM_134427	chr9,chr9	-,+	POLE3,RGS3	-150207,2451
chr15:44039484-44040530	chr15	+	44039484	44040376	True	NR_002318,NM_005313	chr15,chr15	-,+	CATSPER2P1,PDIA3	-988,-945
chr17:33759393-33759785	chr17	+	33759413	33759765	True	NR_003037,NM_018042	chr17,chr17	+,-	SNORD7,SLFN12	140910,6
chr2:95786834-95787152	chr2	+	95786887	95787153	True	NM_031902,NM_001017396	chr2,chr2	-,+	MRPS5,ZNF2	651,44029
chr7:101008418-101009022	chr7	+	101008425	101008705	True	NM_022777,NM_133457	chr7,chr7	-,+	RABL5,EMID2	-43332,-2354
chr13:42845692-42845947	chr13	+	42845695	42845933	True	NM_016248,NM_001009814	chr13,chr13	+,-	AKAP11,KIAA0564	355,-310474
chr5:79286796-79287086	chr5	+	79287051	79287128	True	NM_003248,NM_001010891,NM_001167741	chr5,chr5,chr5	+,-,-	THBS4,MTX3,MTX3	44041,10,10
chr9:73028203-73028473	chr9	+	73028213	73028507	True	NM_001206,NM_015110	chr9,chr9	-,+	KLF9,SMC5	1116,-154386
chr19:43919797-43920562	chr19	+	43919950	43920500	True	NM_001130011,NM_014400	chr19,chr19	+,-	TEX101,LYPD3	-966,49381
chr16:2825023-2825455	chr16	+	2825028	2825427	True	NM_016333,NM_001135086,NM_007108,NM_207013	chr16,chr16,chr16,chr16	+,+,-,-	SRRM2,PRSS41,TCEB2,TCEB2	-22749,23058,1920,1920
chr10:65008203-65009340	chr10	+	65008564	65009304	True	NM_004241,NM_030759	chr10,chr10	-,+	JMJD1C,NRBF2	19738,-115615
chr16:52580092-52580345	chr16	+	52580207	52580283	True	NM_001080430,NM_025134,NM_001146188	chr16,chr16,chr16	-,+,-	TOX3,CHD9,TOX3	573,508661,1481
chr17:37008397-37009307	chr17	+	37008699	37009339	True	NR_002576,NM_000978,NM_006148	chr17,chr17,chr17	-,-,+	SNORA21,RPL23,LASP1	1,764,16772
chr7:100082879-100083082	chr7	+	100082926	100083130	True	NM_173564,NM_030935	chr7,chr7	+,-	C7orf51,TSC22D4	-1427,-6024
chr3:195764449-195765463	chr3	+	195764579	195765471	True	NM_003234,NR_034088	chr3,chr3	-,+	TFRC,LOC401109	43545,104035
chr6:147532367-147533080	chr6	+	147532533	147533132	True	NM_139244,NR_034115,NM_001127715	chr6,chr6,chr6	+,-,+	STXBP5,LOC729178,STXBP5	-7088,-6783,-7088
chr9:21559998-21560403	chr9	+	21560083	21560449	True	NR_027054,NM_024013	chr9,chr9	-,+	LOC554202,IFNA1	-386,-119694
chr14:77844328-77845539	chr14	+	77844335	77845577	True	NM_001010860,NM_213601	chr14,chr14	+,-	SAMD15,TMED8	-624,-939
chr5:129298475-129298746	chr5	+	129298515	129298763	True	NR_024611,NM_175856	chr5,chr5	-,+	HINT1,CHSY3	1202313,-58050
chr6:7518560-7519209	chr6	+	7518580	7519050	True	NM_001008844,NM_001170693	chr6,chr6	+,-	DSP,CAGE1	22819,-128638
chr11:1891166-1891396	chr11	+	1891226	1891442	True	NR_036185,NM_001013254,NM_001013255,NM_001013253	chr11,chr11,chr11,chr11	-,+,+,+	MIR4298,LSP1,LSP1,LSP1	-10460,656,711,-1374
chr19:36132625-36133029	chr19	+	36132625	36132972	True	NM_000704,NM_001863,NM_014209	chr19,chr19,chr19	-,+,+	ATP4A,COX6B1,ETV2	-78065,6152,-29
chr11:74955716-74956890	chr11	+	74955824	74956672	True	NM_001195528,NR_029891	chr11,chr11	+,-	LOC441617,MIR326	-3935,89608
chr5:141011885-141012519	chr5	+	141011998	141012458	True	NM_001130029,NM_173828,NM_003883	chr5,chr5,chr5	+,+,-	RELL2,RELL2,HDAC3	4058,4058,4015
chr3:182690752-182691316	chr3	+	182690999	182691296	True	NM_014616,NM_020640	chr3,chr3	+,-	ATP11B,DCUN1D1	-179760,7095
chr17:36613312-36613659	chr17	+	36613559	36613679	True	NM_001004334,NM_001199417	chr17,chr17	-,+	GPR179,ARHGAP23	-113866,-28890
chr2:182850439-182850772	chr2	+	182850441	182850813	True	NM_002500,NM_001080545	chr2,chr2	-,+	NEUROD1,PPP1R1C	-305049,-40
chr12:79356617-79357797	chr12	+	79356798	79357846	True	NM_001135806,NM_002583	chr12,chr12	+,-	SYT1,PAWR	81586,726994
chr21:34146535-34148057	chr21	+	34146558	34147285	True	NM_013329,NR_027873,NM_016631,NR_024622,NR_024623	chr21,chr21,chr21,chr21,chr21	-,-,-,+,+	GCFC1,GCFC1,GCFC1,C21orf49,C21orf49	-2389,-2389,-2389,-2211,-2211
chr10:126717631-126718274	chr10	+	126717631	126718167	True	NM_022802,NM_017580,NR_036178	chr10,chr10,chr10	-,+,-	CTBP2,ZRANB1,MIR4296	-1178,-86998,3322
chr2:159332888-159333857	chr2	+	159333162	159333875	True	NM_001171637,NM_003628	chr2,chr2	-,+	CCDC148,PKP4	-19897,-19745
chr19:1268072-1268497	chr19	+	1268216	1268358	True	NR_027271,NM_017914,NR_023313,NM_001280,NR_023312	chr19,chr19,chr19,chr19,chr19	-,+,+,+,+	C19orf23,C19orf24,CIRBP,CIRBP,CIRBP	1951,7161,908,908,908
chr7:133809056-133810516	chr7	+	133809201	133810473	True	NM_032826,NM_144648	chr7,chr7	-,+	SLC35B4,LRGUK	191404,1631
chr17:39140122-39140418	chr17	+	39140126	39140418	True	NM_033061,NM_182497	chr17,chr17	+,-	KRTAP4-7,KRT40	100040,3019
chr6:13944021-13945213	chr6	+	13944238	13945229	True	NM_001031713,NM_001165033	chr6,chr6	-,+	CCDC90A,RNF182	-129449,-18865
chr1:2322634-2322900	chr1	+	2322699	2322905	True	NM_024848,NM_007033	chr1,chr1	-,+	MORN1,RER1	138,308
chr20:43581950-43582921	chr20	+	43581955	43582905	True	NM_006809,NM_006282	chr20,chr20	-,+	TOMM34,STK4	6259,12214
chr2:166122972-166124868	chr2	+	166122995	166123788	True	NM_001040142,NM_006922,NM_021007	chr2,chr2,chr2	+,-,+	SCN2A,SCN3A,SCN2A	-27138,-62418,26552
chr5:177301853-177302442	chr5	+	177301966	177302461	True	NR_003615,NM_173663	chr5,chr5	+,-	LOC728554,FAM153A	-27,-94461
chr5:177301853-177302442	chr5	-	175395345	175395667	False	NM_032361,NM_001008220	chr5,chr5	-,+	THOC3,CPLX2	27,-96895
chr1:44870217-44871032	chr1	+	44870359	44871013	True	NM_018150,NM_024066	chr1,chr1	+,-	RNF220,ERI3	-54,-49420
chr1:157104335-157104816	chr1	+	157104402	157104848	True	NM_001145312,NR_001560,NM_005240	chr1,chr1,chr1	-,+,-	ETV3,CYCSP52,ETV3	3585,-6299,3379
chr10:99401178-99402437	chr10	+	99401222	99402020	True	NM_018425,NM_178832,NM_001098831	chr10,chr10,chr10	+,-,-	PI4K2A,MORN4,MORN4	-830,-7878,-7309
chr18:29668623-29669223	chr18	+	29668757	29669269	True	NM_014939,NM_001191324,NM_198128,NM_016271	chr18,chr18,chr18,chr18	-,+,+,+	TRAPPC8,RNF138,RNF138,RNF138	-145666,3299,3299,2548
chr10:70717109-70717573	chr10	+	70717165	70717611	True	NM_004728,NM_152707	chr10,chr10	+,-	DDX21,SLC25A16	-1331,-429885
chr11:67438896-67439709	chr11	+	67438951	67439011	True	NM_007103,NM_000695,NM_001031615	chr11,chr11,chr11	+,-,-	NDUFV1,ALDH3B2,ALDH3B2	-64683,3141,9724
chr3:31575335-31577070	chr3	+	31575519	31576257	True	NM_178862,NM_001174060	chr3,chr3	+,-	STT3B,OSBPL10	-1079,447147
chr19:57865536-57866138	chr19	+	57865668	57866066	True	NM_173631,NR_002166,NM_020657,NM_020633	chr19,chr19,chr19,chr19	+,+,+,-	ZNF547,TRAPPC2P1,ZNF304,VN1R1	8824,8812,-3074,102091
chr18:56987729-56988749	chr18	+	56987868	56988596	True	NM_181654,NM_002091	chr18,chr18	-,+	CPLX4,GRP	-1987,-100521
chr10:135091429-135091923	chr10	+	135091438	135091846	True	NM_001164490,NM_001109,NM_145806,NM_001164489	chr10,chr10,chr10,chr10	-,-,+,-	ADAM8,ADAM8,ZNF511,ADAM8	-1031,-1031,30576,-1031
chr17:37356916-37358322	chr17	+	37357041	37358163	True	NM_199248,NM_000981,NM_000723,NM_199247	chr17,chr17,chr17,chr17	-,+,-,-	CACNB1,RPL19,CACNB1,CACNB1	-3140,-557,-3140,-3140
chr10:118425753-118426592	chr10	+	118425755	118426611	True	NM_005396,NM_144661	chr10,chr10	+,-	PNLIPRP2,C10orf82	-45346,2921
chr1:17447606-17447886	chr1	+	17447622	17447794	True	NM_007365,NM_013358	chr1,chr1	-,+	PADI2,PADI1	-1674,83826
chr1:174969465-174970968	chr1	+	174969692	174970414	True	NM_014412,NM_022100,NM_001007214	chr1,chr1,chr1	+,-,+	CACYBP,MRPS14,CACYBP	-851,22228,-1172
chr9:116327627-116327933	chr9	+	116327706	116327864	True	NM_017443,NM_134427	chr9,chr9	-,+	POLE3,RGS3	-154677,-396
chr2:231170424-231170629	chr2	+	231170429	231170621	True	NM_138402,NM_001185015	chr2,chr2	+,-	SP140L,SP110	21272,-79985
chr10:17272089-17272343	chr10	+	17272195	17272315	True	NM_003380,NM_004412	chr10,chr10	+,-	VIM,TRDMT1	-1990,-28125
chr1:26735736-26735938	chr1	+	26735813	26735981	True	NM_173574,NM_024674	chr1,chr1	-,+	ZNF683,LIN28A	-36547,1287
chr4:184364947-184365298	chr4	+	184365010	184365314	True	NR_033995,NM_017632	chr4,chr4	-,+	LOC389247,CDKN2AIP	60404,474
chr17:26554959-26556384	chr17	+	26555051	26556097	True	NR_003064,NR_028334	chr17,chr17	+,-	PYY2,FLJ40504	-1513,78361
chr1:15854648-15855758	chr1	+	15854987	15855783	True	NM_015291,NM_032996,NM_001229	chr1,chr1,chr1	+,-,-	DNAJC16,CASP9,CASP9	-1697,-3702,-4047
chr1:6296229-6296532	chr1	+	6296240	6296330	True	NM_012405,NM_001024598	chr1,chr1	-,+	ICMT,HES3	-196,7921
chr3:154118068-154119567	chr3	+	154118183	154119598	True	NM_001038705,NM_015595	chr3,chr3	-,+	GPR149,ARHGEF26	27956,-279089
chr15:66586450-66587086	chr15	+	66586660	66587132	True	NM_133375,NM_001143688,NM_032445	chr15,chr15,chr15	+,+,-	DIS3L,DIS3L,MEGF11	-1078,-791,-40585
chr12:65514577-65514885	chr12	+	65514583	65514875	True	NM_001167614,NM_007191	chr12,chr12	+,-	LEMD3,WIF1	48475,521
chr5:145719392-145719642	chr5	+	145719395	145719691	True	NM_020117,NM_002700	chr5,chr5	-,+	LARS,POU4F3	-157101,-859
chr14:24664109-24664455	chr14	+	24664160	24664248	True	NM_006405,NM_001014842,NM_001184739,NM_024658	chr14,chr14,chr14,chr14	-,-,+,-	TM9SF1,TM9SF1,TSSK4,IPO4	684,684,10677,-6036
chr21:26790212-26791488	chr21	+	26790269	26791448	True	NR_024027,NR_001458	chr21,chr21	-,+	NCRNA00158,MIR155HG	12615,143008
chr6:119669983-119670250	chr6	+	119670062	119670278	True	NM_005907,NM_014034	chr6,chr6	-,+	MAN1A1,ASF1A	698,-454872
chr22:31536108-31536445	chr22	+	31536114	31536468	True	NM_015715,NM_001002837	chr22,chr22	-,+	PLA2G3,INPP5J	51,-17204
chr2:238770376-238771118	chr2	+	238770536	238771141	True	NM_005855,NR_033308	chr2,chr2	+,-	RAMP1,RAB17	-2401,-270767
chr3:51931949-51932381	chr3	+	51932066	51932408	True	NM_152397,NM_203424	chr3,chr3	-,+	IQCF1,IQCF2	5032,-36472
chr12:6976600-6976832	chr12	+	6976626	6976850	True	NM_032641,NM_000365,NM_001146316,NR_027483,NM_001159287	chr12,chr12,chr12,chr12,chr12	-,+,-,+,+	SPSB2,TPI1,SPSB2,TPI1,TPI1	5721,-2,5649,427,-93
chr11:33185643-33187115	chr11	+	33185814	33186564	True	NR_034027,NM_001033505,NM_001033506,NM_001326	chr11,chr11,chr11,chr11	+,-,-,-	LOC338739,CSTF3,CSTF3,CSTF3	-2670,-2777,-2777,-2777
chr2:47919913-47920642	chr2	+	47920299	47920544	True	NM_022055,NM_000179	chr2,chr2	-,+	KCNK12,MSH6	-122829,89676
chrX:110487521-110489235	chrX	+	110487629	110488861	True	NM_001128173,NM_014289	chrX,chrX	+,-	PAK3,CAPN6	-121383,24963
chr8:128498418-128499776	chr8	+	128498533	128499451	True	NM_001159542,NR_024393	chr8,chr8	+,-	POU5F1B,LOC727677	-70737,-4149
chr6:24400426-24401974	chr6	+	24400751	24401749	True	NM_001195610,NM_020662	chr6,chr6	-,+	DCDC2,MRS2	-17231,1403
chr6:43543779-43543982	chr6	+	43543789	43544031	True	NM_020750,NM_006502	chr6,chr6	-,+	XPO5,POLH	23,38
chr1:40024891-40025353	chr1	+	40024912	40025102	True	NR_003929,NM_181809,NR_002983	chr1,chr1,chr1	-,+,-	PPIEL,BMP8A,SNORA55	318,-67645,8130
chr22:21370341-21370732	chr22	+	21370455	21370567	True	NM_001159554,NR_003608,NM_005446	chr22,chr22,chr22	+,-,+	P2RX6,MGC16703,P2RX6	-1064,-1879,-1042
chr17:27571622-27572163	chr17	+	27571781	27572133	True	NM_005208,NM_020772	chr17,chr17	+,-	CRYBA1,NUFIP2	1741,49089
chr17:49231387-49232153	chr17	+	49231398	49231928	True	NM_001018136,NR_037149,NM_000269,NM_198175,NM_003971	chr17,chr17,chr17,chr17,chr17	+,+,+,+,-	NME1-NME2,NME1-NME2,NME1,NME1,SPAG9	-552,-552,-529,-529,-33172
chr12:127648816-127650202	chr12	+	127648825	127649783	True	NR_033970,NR_033987	chr12,chr12	-,+	LOC440117,FLJ37505	-289589,716378
chr2:152118155-152118395	chr2	+	152118175	152118421	True	NM_007115,NM_198557	chr2,chr2	+,-	TNFAIP6,RBM43	95684,18
chr13:21518098-21518488	chr13	+	21518307	21518371	True	NM_022459,NM_005870	chr13,chr13	-,+	XPO4,SAP18	-41394,196281
chr2:105954246-105954616	chr2	+	105954312	105954634	True	NM_001142621,NM_024093,NM_004257	chr2,chr2,chr2	-,+,-	TGFBRAP1,C2orf49,TGFBRAP1	-8164,-351,-8164
chr3:3165142-3166698	chr3	+	3165276	3166532	True	NM_175727,NM_182916	chr3,chr3	-,+	IL5RA,TRNT1	-13218,2067
chr21:43815552-43816188	chr21	+	43815656	43816205	True	NM_018961,NM_024022,NM_032405,NM_001001895,NR_027348	chr21,chr21,chr21,chr21,chr21	+,-,-,+,-	UBASH3A,TMPRSS3,TMPRSS3,UBASH3A,TMPRSS3	7813,45,45,7813,-6403
chr7:31004715-31005582	chr7	+	31004868	31005444	True	NM_001202481,NM_000823	chr7,chr7	-,+	CRHR2,GHRHR	-265149,-1283
chrX:70435211-70435812	chrX	+	70435218	70435727	True	NM_000166,NM_001097642,NM_201599	chrX,chrX,chrX	+,+,-	GJB1,GJB1,ZMYM3	7328,-207,38370
chr2:201464548-201465656	chr2	+	201464955	201465699	True	NM_001159,NM_152387	chr2,chr2	+,-	AOX1,KCTD18	-14275,-90163
chr14:74319480-74320116	chr14	+	74319824	74320004	True	NM_152444,NM_001146154,NM_001146155,NM_001043318	chr14,chr14,chr14,chr14	+,+,+,-	PTGR2,PTGR2,PTGR2,C14orf43	-1260,-1347,-1334,-65928
chr6:24359956-24360229	chr6	+	24360065	24360213	True	NM_016356,NM_181337	chr6,chr6	-,+	DCDC2,KAAG1	-1785,-2985
chr1:110281938-110282359	chr1	+	110282029	110282291	True	NM_000851,NR_024537,NM_000849	chr1,chr1,chr1	+,-,-	GSTM5,GSTM3,GSTM3	-27223,1419,1419
chr10:26982174-26983598	chr10	+	26982578	26983607	True	NM_014317,NM_001012750	chr10,chr10	+,-	PDSS1,ABI1	2987,166459
chr1:27224899-27225316	chr1	+	27225030	27225139	True	NM_018066,NM_022078,NM_006600	chr1,chr1,chr1	-,-,+	GPN2,GPATCH3,NUDC	-8161,1874,23084
chr17:57418874-57420747	chr17	+	57419304	57420500	True	NM_182620,NM_001005404	chr17,chr17	-,+	SKA2,YPEL2	-186504,-10302
chr14:51345585-51347187	chr14	+	51345733	51346974	True	NM_181533,NM_181814,NM_182944	chr14,chr14,chr14	+,+,-	ABHD12B,ABHD12B,NIN	-6906,-6906,-47894
chr14:73491867-73493299	chr14	+	73492082	73493317	True	NM_021239,NM_021260	chr14,chr14	+,-	RBM25,ZFYVE1	31903,653
chr11:120082342-120082762	chr11	+	120082457	120082729	True	NM_012101,NM_178507	chr11,chr11	-,+	TRIM29,OAF	-73594,-761
chr16:2521885-2522607	chr16	+	2522033	2522615	True	NM_001199107,NM_006181,NM_020705,NM_001048212	chr16,chr16,chr16,chr16	+,+,+,-	TBC1D24,NTN3,TBC1D24,CEMP1	2531,-584,2531,58844
chr13:46962801-46964184	chr13	+	46962814	46963844	True	NM_001164211,NM_025113	chr13,chr13	+,-	LRCH1,C13orf18	163451,-1179
chr1:45957051-45957682	chr1	+	45957050	45957505	True	NM_007170,NR_033296,NR_033297,NM_015506,NR_033298	chr1,chr1,chr1,chr1,chr1	-,-,-,+,-	TESK2,CCDC163P,CCDC163P,MMACHC,CCDC163P	-210,8304,8304,8350,8304
chrX:100607005-100608908	chrX	+	100607165	100608915	True	NM_001145951,NM_021029,NM_004085	chrX,chrX,chrX	-,+,-	TIMM8A,RPL36A,TIMM8A	-3457,36962,-3208
chr17:37843693-37844185	chr17	+	37843693	37844197	True	NM_001005862,NM_033419	chr17,chr17	+,-	ERBB2,PGAP3	195,163
chr7:63891509-63892847	chr7	+	63892003	63892492	True	NM_178558,NR_029404	chr7,chr7	-,+	ZNF680,LOC649395	131067,1578
chr17:73663170-73663395	chr17	+	73663229	73663421	True	NM_001003716,NM_004259,NM_001003715,NM_013260	chr17,chr17,chr17,chr17	-,-,-,+	RECQL5,RECQL5,RECQL5,SAP30BP	14,10,14,-23
chr14:70826924-70828292	chr14	+	70827232	70828324	True	NM_001204090,NM_003813,NM_016468	chr14,chr14,chr14	-,+,-	COX16,ADAM21,COX16	-784,95892,-784
chr3:150922982-150923392	chr3	+	150922988	150923440	True	NM_053002,NM_013308	chr3,chr3	+,-	MED12L,GPR171	-118363,-2000
chr10:72428256-72428719	chr10	+	72428435	72428707	True	NM_139155,NM_080722,NM_005041	chr10,chr10,chr10	+,+,-	ADAMTS14,ADAMTS14,PRF1	3851,3851,-65904
chrX:47246681-47248504	chrX	+	47246947	47248553	True	NR_003710,NM_007130	chrX,chrX	+,-	SNORA11C,ZNF41	-2,93847
chr5:157063468-157063855	chr5	+	157063467	157063865	True	NM_001145132,NM_007017	chr5,chr5	+,-	C5orf52,SOX30	34695,15617
chr3:46604374-46605259	chr3	+	46604524	46605217	True	NM_001174136,NM_024512	chr3,chr3	+,-	TDGF1,LRRC2	10827,2845
chr20:32030793-32031139	chr20	+	32030850	32031186	True	NM_003098,NM_001032999	chr20,chr20	-,+	SNTA1,CBFA2T2	562,46741
chr16:730925-731134	chr16	+	730946	731182	True	NM_032259,NM_001005920,NM_003961,NM_005861	chr16,chr16,chr16,chr16	-,-,+,+	WDR24,JMJD8,RHBDL1,STUB1	9268,3307,-4923,-883
chr4:25568793-25570678	chr4	+	25569134	25570726	True	NM_015187,NM_001177998	chr4,chr4	-,+	SEL1L3,SLC34A2	293934,86708
chr20:19192505-19192802	chr20	+	19192612	19192672	True	NR_024564,NM_020689	chr20,chr20	-,+	LOC100130264,SLC24A3	72618,617
chr11:57092772-57093103	chr11	+	57092840	57093152	True	NM_002559,NM_033396	chr11,chr11	+,-	P2RX3,TNKS1BP1	12796,-427
chr8:143781855-143782093	chr8	+	143781959	143782053	True	NM_017527,NM_003724,NM_001160354,NM_001160355	chr8,chr8,chr8,chr8	+,-,+,+	LY6K,JRK,LY6K,LY6K	-481,-30558,-481,-481
chrX:68384376-68384984	chrX	+	68384605	68384958	True	NM_145119,NM_004429,NM_022368,NM_001032396	chrX,chrX,chrX,chrX	-,+,-,-	PJA1,EFNB1,PJA1,PJA1	457,-335816,457,457
chr4:76650273-76650656	chr4	+	76650304	76650684	True	NM_203505,NM_003715	chr4,chr4	-,+	G3BP2,USO1	-51637,-526
chr20:3872424-3873178	chr20	+	3872531	3873146	True	NM_153640,NM_153638,NM_024960,NR_031722	chr20,chr20,chr20,chr20	+,+,+,-	PANK2,PANK2,PANK2,MIR103-2AS	-2130,-2851,-3107,25114
chr3:133383638-133383877	chr3	+	133383666	133383800	True	NM_001063,NM_007027	chr3,chr3	+,-	TF,TOPBP1	81176,-2929
chr16:811257-811465	chr16	+	811262	811382	True	NM_005823,NR_030384,NM_001177355,NM_022493,NM_013404	chr16,chr16,chr16,chr16,chr16	+,+,+,-,+	MSLN,MIR662,MSLN,NARFL,MSLN	-548,8800,-547,-20265,-240
chr14:24700117-24701523	chr14	+	24700421	24701480	True	NM_006156,NM_001002001,NM_001002000,NM_001199823,NM_016576,NM_001002002	chr14,chr14,chr14,chr14,chr14,chr14	-,+,+,-,+,+	NEDD8,GMPR2,GMPR2,NEDD8-MDP1,GMPR2,GMPR2	146,167,167,146,622,622
chr5:169760379-169760718	chr5	+	169760437	169760727	True	NR_026945,NM_005565	chr5,chr5	+,-	LOC257358,LCP2	-2062,-35615
chr19:21544459-21544806	chr19	+	21544485	21544721	True	NR_027130,NM_021269	chr19,chr19	+,-	ZNF738,ZNF708	-2801,-32273
chr19:40433368-40433777	chr19	+	40433453	40433741	True	NM_003890,NM_006503	chr19,chr19	-,+	FCGBP,PSMC4	6842,43331
chr22:21044139-21044374	chr22	+	21044172	21044252	True	NM_002650,NR_024592	chr22,chr22	-,+	PI4KA,POM121L4P	44753,-380
chr15:25308829-25309419	chr15	+	25308873	25309385	True	NR_003317,NR_003322,NR_003320,NR_003321,NR_003324,NR_003323,NR_003325,NR_003319,NR_003318,NM_130838	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,-	SNORD116-2,SNORD116-7,SNORD116-5,SNORD116-6,SNORD116-9,SNORD116-8,SNORD116-10,SNORD116-4,SNORD116-3,UBE3A	786,-1445,-1445,786,-6918,6192,9874,-4240,-6918,341318
chr14:104028117-104028353	chr14	+	104028200	104028352	True	NM_032374,NM_001015049,NM_004873,NM_001015048	chr14,chr14,chr14,chr14	+,-,-,-	C14orf153,BAG5,BAG5,BAG5	946,353,353,849
chr3:149375518-149375805	chr3	+	149375522	149375846	True	NM_007282,NM_001168280,NM_015472	chr3,chr3,chr3	+,-,-	RNF13,WWTR1,WWTR1	154628,16,92
chr16:48670843-48671158	chr16	+	48670908	48671126	True	NM_153029,NM_031490	chr16,chr16	-,+	N4BP1,LONP2	-26788,-392755
chr1:20502705-20503367	chr1	+	20502747	20503409	True	NM_001105572,NM_152376	chr1,chr1	-,+	PLA2G2C,UBXN10	-1060,9168
chr10:126110014-126111221	chr10	+	126110077	126111215	True	NM_000274,NM_001171814,NM_001167880	chr10,chr10,chr10	-,-,+	OAT,OAT,LHPP	-2532,-2532,39125
chr16:69363943-69364229	chr16	+	69363947	69364215	True	NM_022341,NM_001199434,NM_016101,NM_032382	chr16,chr16,chr16,chr16	-,+,+,-	PDF,NIP7,NIP7,COG8	333,9199,9199,9361
chr13:99295292-99296755	chr13	+	99295427	99296557	True	NM_001032296,NR_036129	chr13,chr13	-,+	STK24,MIR3170	-66031,-434700
chr4:40336048-40337260	chr4	+	40336133	40337043	True	NM_019027,NM_017581	chr4,chr4	-,+	RBM47,CHRNA9	180997,425
chr2:173696155-173696900	chr2	+	173696449	173696933	True	NR_026995,NM_001100397	chr2,chr2	-,+	LOC91149,RAPGEF4	-95515,-10198
chr7:63023350-63023673	chr7	+	63023489	63023721	True	NR_028349,NR_036246	chr7,chr7	-,+	LOC100287834,MIR4283-1	-164070,57746
chr7:63023350-63023673	chr7	-	57081366	57081416	False	NR_036270,NR_036102	chr7,chr7	-,+	MIR4283-2,MIR3147	-57795,391314
chr1:48373308-48374906	chr1	+	48373387	48374614	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	87998,313742
chr18:18694301-18696221	chr18	+	18694428	18696123	True	NM_005406,NM_001142966	chr18,chr18	-,+	ROCK1,GREB1L	-2616,126079
chr1:197740519-197741877	chr1	+	197740590	197741647	True	NM_001024594,NM_001195216,NM_001195215,NM_144977	chr1,chr1,chr1,chr1	+,-,-,-	C1orf53,DENND1B,DENND1B,DENND1B	130034,3039,3039,3039
chr1:1550116-1550512	chr1	+	1550418	1550488	True	NM_001170687,NM_080875,NM_001170689,NM_001170688,NM_001170686,NR_033183,NM_014188	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,+,-	MIB2,MIB2,MIB2,MIB2,MIB2,MIB2,SSU72	306,306,756,306,306,306,-40156
chr19:44079943-44081211	chr19	+	44079959	44081048	True	NM_001193621,NM_001193622,NM_006297	chr19,chr19,chr19	+,+,-	LOC390940,LOC390940,XRCC1	-97,3647,-229
chr8:102502073-102502533	chr8	+	102502304	102502498	True	NM_016096,NM_024915	chr8,chr8	-,+	ZNF706,GRHL2	-284344,2169
chr11:64069436-64069911	chr11	+	64069473	64069567	True	NM_004451,NM_001039496,NM_016404	chr11,chr11,chr11	+,+,-	ESRRA,C11orf20,TRMT112	3476,-1661,15516
chr2:228234777-228235396	chr2	+	228234796	228235100	True	NM_020194,NM_024795	chr2,chr2	+,-	MFF,TM4SF20	-42621,8972
chr19:50923060-50923975	chr19	+	50923515	50923797	True	NM_003121,NM_004851	chr19,chr19	+,-	SPIB,NAPSA	-1375,-54584
chr12:29397468-29398004	chr12	+	29397472	29397920	True	NM_018099,NM_016570	chr12,chr12	+,-	FAR2,ERGIC2	-20928,136273
chr2:17932669-17934320	chr2	+	17932976	17934318	True	NM_024624,NM_001130009,NM_001142286,NM_182625	chr2,chr2,chr2,chr2	-,+,-,+	SMC6,GEN1,SMC6,GEN1	828,1095,828,858
chr5:40798037-40798331	chr5	+	40798085	40798285	True	NM_032587,NM_006251,NM_206907	chr5,chr5,chr5	+,-,-	CARD6,PRKAA1,PRKAA1	43124,62,62
chr15:35049364-35050711	chr15	+	35049532	35050618	True	NM_175741,NM_020660	chr15,chr15	+,-	C15orf55,GJD2	-411524,-2843
chr7:98028418-98029114	chr7	+	98028485	98029154	True	NM_001159491,NM_018842	chr7,chr7	+,-	BRI3,BAIAP2L1	-117565,1331
chr8:82023308-82023887	chr8	+	82023332	82023770	True	NM_001444,NM_018440	chr8,chr8	+,-	FABP5,PAG1	168947,583
chr19:12779555-12779822	chr19	+	12779572	12779694	True	NM_001099737,NM_001173498,NM_032332,NM_000528,NM_016145,NR_029375	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,-,-,+	WDR83,MAN2B1,WDR83,MAN2B1,C19orf56,WDR83	-2005,-1981,822,-1981,821,-2005
chr19:13048545-13048761	chr19	+	13048638	13048758	True	NM_004461,NM_005053,NM_004343	chr19,chr19,chr19	-,+,+	FARSA,RAD23A,CALR	-4080,7895,655
chr19:7537676-7537914	chr19	+	7537903	7537963	True	NR_024491,NM_198534	chr19,chr19	-,+	LOC100128573,C19orf45	334,24481
chr7:131009039-131010571	chr7	+	131009044	131010609	True	NR_015431,NM_013255	chr7,chr7	-,+	FLJ43663,MKLN1	-215482,1985
chr1:28975234-28975792	chr1	+	28975233	28975615	True	NR_004407,NM_005644,NM_001135218	chr1,chr1,chr1	+,-,-	RNU11,TAF12,TAF12	-172,-5629,-5629
chr17:10633858-10634370	chr17	+	10634065	10634419	True	NM_001004313,NM_020233	chr17,chr17	-,+	TMEM220,C17orf48	-419,-33198
chr8:133066484-133067226	chr8	+	133066494	133067235	True	NM_001080399,NM_015137	chr8,chr8	-,+	OC90,EFR3A	4449,-150189
chr2:132283450-132284804	chr2	+	132284028	132284600	True	NM_001085365,NM_138770	chr2,chr2	-,+	MZT2A,CCDC74A	-33964,891
chr17:65039699-65040163	chr17	+	65039802	65040157	True	NM_014877,NM_000727	chr17,chr17	-,+	HELZ,CACNG1	201212,494
chr16:74353809-74355258	chr16	+	74353819	74355206	True	NR_026950,NM_002811	chr16,chr16	-,+	LOC283922,PSMD7	46997,-23197
chr1:89160732-89161907	chr1	+	89161024	89161956	True	NM_001514,NM_006256	chr1,chr1	-,+	GTF2B,PKN2	195398,-11162
chr2:39146159-39146580	chr2	+	39146224	39146590	True	NM_001145451,NR_028386	chr2,chr2	+,-	ARHGEF33,LOC375196	-13,40947
chr9:131645973-131646452	chr9	+	131646310	131646418	True	NM_001127245,NM_001127244,NM_019594,NM_001122672,NM_001122671,NM_004059	chr9,chr9,chr9,chr9,chr9,chr9	+,+,+,-,-,-	LRRC8A,LRRC8A,LRRC8A,CCBL1,CCBL1,CCBL1	-1970,-1580,-1970,-1956,-1956,-1956
chr21:46032858-46033299	chr21	+	46033093	46033244	True	NM_198695,NM_198688	chr21,chr21	+,-	KRTAP10-8,KRTAP10-6	-1148,-20707
chr1:84443642-84445004	chr1	+	84443843	84444810	True	NM_207578,NM_024686	chr1,chr1	+,-	PRKACB,TTLL7	98934,20080
chr5:140681766-140682885	chr5	+	140682162	140682928	True	NM_031947,NM_031993	chr5,chr5	-,+	SLC25A2,PCDHGA1	735,27323
chr5:72419177-72419436	chr5	+	72419233	72419349	True	NM_004472,NM_173490,NM_001161342	chr5,chr5,chr5	-,+,+	FOXD1,TMEM171,TMEM171	325053,-2896,-2896
chr1:231667707-231669003	chr1	+	231667829	231668812	True	NR_028393,NR_028394,NR_028395,NR_028396,NR_028397,NR_028398,NR_028399,NR_033826,NM_005999,NR_028400	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,+,+,-,+,+	TSNAX-DISC1,TSNAX-DISC1,TSNAX-DISC1,TSNAX-DISC1,TSNAX-DISC1,TSNAX-DISC1,TSNAX-DISC1,SNRPD2P2,TSNAX,TSNAX-DISC1	-3488,-3488,-3488,-3488,-3488,-3488,-3488,-55558,-3488,-3488
chr11:14384375-14385034	chr11	+	14384494	14384858	True	NM_000922,NM_001102669,NM_012250,NM_001177314,NM_001177315	chr11,chr11,chr11,chr11,chr11	+,-,-,-,-	PDE3B,RRAS2,RRAS2,RRAS2,RRAS2	280410,-4421,-3764,1245,-4463
chr4:73435592-73435828	chr4	+	73435593	73435875	True	NM_053036,NM_014243	chr4,chr4	+,-	NPFFR2,ADAMTS3	-530795,-1077
chr15:76017582-76017832	chr15	+	76017618	76017874	True	NM_175881,NM_001897	chr15,chr15	+,-	ODF3L1,CSPG4	-1350,-12429
chr11:104871319-104871785	chr11	+	104871322	104871692	True	NM_001077244,NM_001136109	chr11,chr11	+,-	GRIA4,CASP5	609107,22253
chr13:21142246-21142950	chr13	+	21142418	21142708	True	NM_175605,NM_006531,NM_015974	chr13,chr13,chr13	+,+,-	IFT88,IFT88,CRYL1	-1262,-1262,-42406
chr22:31030004-31030779	chr22	+	31030266	31030748	True	NM_001001479,NR_036550	chr22,chr22	+,-	SLC35E4,PES1	1044,-27266
chr8:11961169-11962966	chr8	+	11961984	11962911	True	NR_003275,NR_027425	chr8,chr8	-,+	LOC392196,FAM66D	23943,10379
chr8:11961169-11962966	chr8	+	12208227	12209154	False	NM_001195257,NR_026789	chr8,chr8	-,+	LOC100133267,FAM66A	-32402,10373
chr8:11961169-11962966	chr8	+	7801230	7802157	False	NR_003668,NR_027424	chr8,chr8	-,+	DEFB109P1B,FAM66E	52936,10377
chr19:51960849-51961077	chr19	+	51960919	51961065	True	NM_001080405,NM_014442	chr19,chr19	+,-	CEACAM18,SIGLEC8	18772,693
chr20:62524938-62525564	chr20	+	62525115	62525587	True	NM_025219,NR_031735	chr20,chr20	+,-	DNAJC5,MIR1914	867,47360
chr14:62583575-62583777	chr14	+	62583574	62583646	True	NM_001017970,NR_015358	chr14,chr14	-,+	TMEM30B,FLJ43390	-835044,428
chr11:117199868-117201219	chr11	+	117199957	117201056	True	NM_014956,NM_138973	chr11,chr11	+,-	CEP164,BACE1	-1437,-12985
chr4:160201130-160201364	chr4	+	160201160	160201409	True	NR_037459,NM_014247	chr4,chr4	-,+	MIR3688,RAPGEF2	-151114,-12221
chr6:48036029-48036264	chr6	+	48036190	48036298	True	NM_207499,NM_001013732,NR_033806	chr6,chr6,chr6	-,-,+	C6orf138,C6orf138,OPN5	177,177,-281437
chr19:30203235-30204275	chr19	+	30203326	30204234	True	NM_001031726,NM_024310,NM_031448	chr19,chr19,chr19	-,+,-	C19orf12,PLEKHF1,C19orf12	1779,-47050,2268
chr17:17875892-17876236	chr17	+	17875942	17876170	True	NM_001130090,NM_001130091,NM_001130092,NM_001033551,NM_031294,NM_001082968	chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,-,+,-	LRRC48,LRRC48,LRRC48,TOM1L2,LRRC48,TOM1L2	-18,-18,-18,-158,-18,-158
chr4:2935747-2936005	chr4	+	2935875	2936001	True	NR_015453,NM_001120,NM_001146069	chr4,chr4,chr4	+,-,-	C4orf10,MFSD10,MFSD10	1276,13,635
chr16:67597201-67597445	chr16	+	67597220	67597400	True	NM_001191022,NM_001138,NM_006565	chr16,chr16,chr16	+,-,+	CTCF,AGRP,CTCF	-961,-79504,-961
chr20:33873754-33875189	chr20	+	33873788	33874832	True	NM_006690,NM_002212,NM_181466,NM_181468,NM_178468	chr20,chr20,chr20,chr20,chr20	+,-,-,-,-	MMP24,EIF6,EIF6,EIF6,FAM83C	-59300,-1194,-1194,-1282,5443
chr22:42609630-42611233	chr22	+	42609902	42611270	True	NM_005650,NM_181492,NR_036498	chr22,chr22,chr22	-,-,+	TCF20,TCF20,LOC388906	225,225,54488
chr3:9690735-9690944	chr3	+	9690861	9690937	True	NM_001077526,NM_198560,NM_022485,NM_001077525	chr3,chr3,chr3,chr3	+,-,+,+	MTMR14,LHFPL4,MTMR14,MTMR14	179,-95375,179,179
chr6:50679718-50681618	chr6	+	50679872	50681634	True	NM_172238,NM_001037498	chr6,chr6	+,-	TFAP2D,DEFB112	78,-663508
chrX:135252897-135254346	chrX	+	135252916	135253774	True	NM_001159704,NM_001173517,NM_001167819	chrX,chrX,chrX	+,-,+	FHL1,MAP7D3,FHL1	-1512,80021,-1171
chr16:50060876-50061273	chr16	+	50060951	50061068	True	NM_153261,NM_015069	chr16,chr16	+,-	TMEM188,ZNF423	-1816,-200033
chr7:8015964-8017059	chr7	+	8016182	8017071	True	NM_138426,NM_002947	chr7,chr7	+,-	GLCCI1,RPA3	-7810,-257944
chr1:40023545-40023877	chr1	+	40023674	40023780	True	NR_003929,NM_181809,NR_002983	chr1,chr1,chr1	-,+,-	PPIEL,BMP8A,SNORA55	1640,-66413,9452
chr21:44748384-44748643	chr21	+	44748383	44748623	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	121280,98429
chr19:52386404-52387294	chr19	+	52386669	52386967	True	NR_024181,NM_032679,NM_001031721,NM_001135590	chr19,chr19,chr19,chr19	-,-,+,-	ZNF577,ZNF577,ZNF613,ZNF577	4287,4327,43720,4287
chr11:1410155-1410568	chr11	+	1410159	1410245	True	NM_019009,NM_003957	chr11,chr11	-,+	TOLLIP,BRSK2	-79267,883
chr16:4354120-4354418	chr16	+	4354175	4354466	True	NM_032575,NM_003223	chr16,chr16	+,-	GLIS2,TFAP4	27758,-31174
chr2:97538820-97539150	chr2	+	97538873	97539081	True	NM_017789,NM_199078	chr2,chr2	-,+	SEMA4C,CNNM3	-3138,-56933
chr19:2722181-2722804	chr19	+	2722190	2722832	True	NM_145173,NM_003249	chr19,chr19	-,+	DIRAS1,THOP1	-800,62673
chrX:48619251-48619768	chrX	+	48619468	48619565	True	NM_013271,NM_001080489	chrX,chrX	-,+	PCSK1N,GLOD5	74446,588
chr14:36985474-36985937	chr14	+	36985474	36985932	True	NM_003317,NM_006194,NM_001101341,NM_001079668	chr14,chr14,chr14,chr14	-,+,-,-	NKX2-1,PAX9,SFTA3,NKX2-1	3021,140840,-2484,3548
chr1:77399381-77399873	chr1	+	77399386	77399881	True	NM_005482,NM_030965	chr1,chr1	-,+	PIGK,ST6GALNAC5	285309,-66251
chr2:54017010-54017321	chr2	+	54017171	54017264	True	NM_001127398,NM_145863,NM_016115,NM_001127397,NM_015701,NM_001201965	chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,+,+,-	ERLEC1,ASB3,ASB3,ERLEC1,ERLEC1,ASB3	-3156,-3025,-3025,-3156,-3156,-3186
chr1:44451652-44452531	chr1	+	44451768	44452500	True	NM_003780,NM_001005417,NM_152499,NM_006934	chr1,chr1,chr1,chr1	+,+,+,-	B4GALT2,B4GALT2,CCDC24,SLC6A9	-6953,-5636,4779,30547
chr11:62430738-62431399	chr11	+	62430740	62430885	True	NM_030628,NR_004390,NM_024099,NM_001085372,NM_001043229	chr11,chr11,chr11,chr11,chr11	-,+,-,+,+	INTS5,SNORA57,C11orf48,C11orf83,METTL12	-9966,2008,8413,8240,1893
chr8:80922306-80922908	chr8	+	80922435	80922948	True	NM_007029,NM_014018	chr8,chr8	+,-	STMN2,MRPS28	-399445,19608
chr17:61028358-61029242	chr17	+	61028400	61029083	True	NM_152598,NM_025185	chr17,chr17	-,+	MARCH10,TANC2	-142695,57814
chr7:89925242-89925687	chr7	+	89925301	89925629	True	NM_001042717,NM_152706	chr7,chr7	+,-	GTPBP10,C7orf62	50349,-1500270
chr1:159253962-159255747	chr1	+	159254005	159255623	True	NM_001004467,NM_002001	chr1,chr1	-,+	OR10J3,FCER1A	28888,3880
chr1:202130314-202130679	chr1	+	202130322	202130726	True	NR_002930,NR_037663,NR_037664,NM_001199797,NM_080588,NM_002832	chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,-,-,-	PTPRVP,PTPN7,PTPN7,PTPN7,PTPN7,PTPN7	6452,40,40,40,-1203,40
chr14:51339130-51340771	chr14	+	51339381	51340718	True	NM_181533,NM_181814,NM_182944	chr14,chr14,chr14	+,+,-	ABHD12B,ABHD12B,NIN	-554,-554,-41542
chr21:45772617-45773333	chr21	+	45772683	45773294	True	NM_003307,NM_004928	chr21,chr21	+,-	TRPM2,C21orf2	189,-13398
chr19:53451642-53453386	chr19	+	53451748	53453397	True	NM_152473,NR_037805	chr19,chr19	+,-	HERV-V1,ZNF321	63946,-5901
chr3:38796936-38798176	chr3	+	38797045	38798110	True	NM_005107,NM_006514	chr3,chr3	+,-	EXOG,SCN10A	-259334,37441
chr5:64920573-64920828	chr5	+	64920616	64920824	True	NM_024941,NM_001656,NM_033228,NM_001093756,NM_033227,NR_003545,NM_001093755	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,-,-,+,-,+,+	C5orf44,TRIM23,TRIM23,C5orf44,TRIM23,C5orf44,C5orf44	-109,-429,-429,-109,-429,-109,-109
chr22:37416411-37416858	chr22	+	37416416	37416708	True	NM_001013436,NR_024038,NM_021126,NM_003312,NM_001130517	chr22,chr22,chr22,chr22,chr22	+,+,+,-,+	MPST,MPST,MPST,TST,MPST	-765,-765,-765,-925,-765
chr1:211434275-211435188	chr1	+	211434297	211434989	True	NM_001136225,NM_001136224,NM_172362,NM_001136223,NM_018254	chr1,chr1,chr1,chr1,chr1	+,+,-,+,+	RCOR3,RCOR3,KCNH1,RCOR3,RCOR3	-1640,-1640,-126840,-1640,-1059
chr4:83540301-83540713	chr4	+	83540383	83540753	True	NR_024088,NM_021204,NR_024087	chr4,chr4,chr4	-,+,-	C4orf11,ENOPH1,C4orf11	1887,-188715,1887
chr4:113064091-113064505	chr4	+	113064148	113064329	True	NM_152400,NM_052864	chr4,chr4	+,-	C4orf32,TIFA	2223,142781
chr8:146022744-146023177	chr8	+	146022809	146023001	True	NM_000973,NM_033301,NM_213605	chr8,chr8,chr8	-,-,+	RPL8,RPL8,ZNF517	-5004,-5080,1259
chr6:20199404-20200914	chr6	+	20199643	20200820	True	NM_001949,NM_001080480	chr6,chr6	+,-	E2F3,MBOAT1	201316,11901
chr9:131274382-131276219	chr9	+	131274408	131275682	True	NM_001003722,NM_001499,NR_029837	chr9,chr9,chr9	+,+,-	GLE1,GLE1,MIR219-2	-7496,-7496,-119415
chr10:127263062-127264628	chr10	+	127263222	127264602	True	NR_023362,NM_001128202	chr10,chr10	+,-	LOC100169752,C10orf122	-333,107161
chr15:41100503-41102411	chr15	+	41100616	41102164	True	NM_018163,NM_001077268	chr15,chr15	-,+	DNAJC17,ZFYVE19	-940,-1393
chr13:44355474-44355740	chr13	+	44355506	44355658	True	NM_017993,NM_001128303	chr13,chr13	-,+	ENOX1,C13orf31	5502,97761
chr14:37051839-37052106	chr14	+	37051921	37052049	True	NM_006194,NM_014360	chr14,chr14	+,-	PAX9,NKX2-8	74723,-135
chr1:207138015-207139120	chr1	+	207138120	207138978	True	NM_001122979,NM_006850,NM_032029,NM_001170631	chr1,chr1,chr1,chr1	-,+,-,-	FCAMR,IL24,FCAMR,FCAMR	5042,-67383,5042,5042
chr17:65822753-65823528	chr17	+	65822911	65823523	True	NM_004459,NM_182641,NM_181655	chr17,chr17,chr17	+,+,-	BPTF,BPTF,C17orf58	-1186,-1186,166292
chr2:211182652-211183439	chr2	+	211182905	211183481	True	NM_079420,NM_001122633	chr2,chr2	-,+	MYL1,CPS1	-3010,158924
chr15:22957010-22958035	chr15	+	22957032	22958003	True	NM_001033028,NM_001008860	chr15,chr15	+,-	CYFIP1,NIPA2	-1328,76474
chr1:10490351-10490692	chr1	+	10490458	10490640	True	NM_198544,NM_004401,NR_036462,NM_199294,NM_199006,NR_037187,NR_037186	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,-,+,+,+,+,+	APITD1-CORT,DFFA,APITD1,APITD1,APITD1-CORT,APITD1-CORT,APITD1-CORT	-350,42023,163,-350,-350,163,163
chr10:103119650-103120018	chr10	+	103119649	103119767	True	NM_006562,NM_003939,NM_033637	chr10,chr10,chr10	-,+,+	LBX1,BTRC,BTRC	-130932,-5879,-5879
chr1:78135437-78136760	chr1	+	78135619	78136801	True	NM_015534,NM_198549	chr1,chr1	-,+	ZZZ3,FAM73A	11592,108507
chr21:34134461-34134949	chr21	+	34134500	34134784	True	NM_013329,NR_024623,NR_024622,NM_016631,NR_027873	chr21,chr21,chr21,chr21,chr21	-,+,+,-,-	GCFC1,C21orf49,C21orf49,GCFC1,GCFC1	9435,9626,9626,9435,9435
chr6:138479542-138480130	chr6	+	138479545	138479933	True	NM_022121,NM_020340	chr6,chr6	-,+	PERP,KIAA1244	-50885,3119
chr8:7703616-7705473	chr8	+	7703751	7705365	True	NM_080389,NM_001040702,NM_001081552,NM_152250,NM_058203	chr8,chr8,chr8,chr8,chr8	+,+,+,-,+	DEFB104A,DEFB104B,SPAG11A,DEFB105A,SPAG11B	-9814,-9814,36,-22391,36
chr8:7703616-7705473	chr8	-	7321228	7322842	False	NM_080389,NM_001040702,NM_001040703,NM_016512,NM_058200,NM_058201,NM_058202,NM_058203	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,+,-,-,-,-,-	DEFB104A,DEFB104B,DEFB105B,SPAG11B,SPAG11B,SPAG11B,SPAG11B,SPAG11B	9817,9817,22400,-36,-36,-36,-36,-36
chr12:95602872-95603725	chr12	+	95603080	95603764	True	NM_017599,NM_018351	chr12,chr12	+,-	VEZT,FGD6	7757,7526
chr12:54784490-54784816	chr12	+	54784508	54784839	True	NM_001130968,NM_015481,NR_029894,NM_001130967	chr12,chr12,chr12,chr12	-,-,+,-	ZNF385A,ZNF385A,MIR148B,ZNF385A	294,-6027,-53559,294
chr3:125609028-125610658	chr3	+	125610178	125610252	True	NM_001015050,NR_024250	chr3,chr3	-,+	ALG1L,LOC100125556	45685,25191
chr8:29118292-29119719	chr8	+	29118601	29119677	True	NM_015254,NM_024567	chr8,chr8	-,+	KIF13B,HMBOX1	984,-370427
chr6:150348922-150350398	chr6	+	150349092	150350446	True	NM_025218,NM_130900	chr6,chr6	+,-	ULBP1,RAET1L	-64000,-2424
chr5:140345511-140345911	chr5	+	140345541	140345923	True	NM_018899,NM_031883,NM_002109	chr5,chr5,chr5	+,+,-	PCDHAC2,PCDHAC2,HARS	39,428,-274570
chr2:32388954-32389441	chr2	+	32389088	32389344	True	NM_017964,NM_001193513,NM_001199138,NM_001193514,NM_001193515	chr2,chr2,chr2,chr2,chr2	+,+,-,+,+	SLC30A6,SLC30A6,NLRC4,SLC30A6,SLC30A6	1565,1565,100667,1565,1565
chr7:138915762-138916099	chr7	+	138915806	138915996	True	NM_173569,NM_024625	chr7,chr7	+,-	UBN2,ZC3HAV1	234,-121341
chr19:52845863-52846675	chr19	+	52846103	52846453	True	NM_001161427,NM_001161426,NM_001161425,NM_001102657,NM_173530	chr19,chr19,chr19,chr19,chr19	+,+,+,-,+	ZNF610,ZNF610,ZNF610,ZNF836,ZNF610	-6657,-6657,-6657,-171207,2228
chrY:2657808-2658081	chrY	+	2657808	2658116	True	NR_003254,NM_003140	chrY,chrY	+,-	XGPY2,SRY	-37522,-2016
chr7:35838355-35838836	chr7	+	35838356	35838878	True	NM_022373,NM_001788,NM_001011553	chr7,chr7,chr7	-,+,+	HERPUD2,SEPT7,SEPT7	-103584,1748,1748
chr9:86423366-86424272	chr9	+	86423432	86424195	True	NM_025211,NM_001135953,NM_024945	chr9,chr9,chr9	-,-,+	GKAP1,GKAP1,RMI1	8614,8614,171441
chr9:86423366-86424272	chr9	-	88430062	88430119	False	NR_029410,NM_015239	chr9,chr9	+,-	LOC389765,AGTPBP1	-9203,-73118
chr15:89351801-89352928	chr15	+	89351969	89352858	True	NM_001135,NM_178232,NM_013227	chr15,chr15,chr15	+,-,+	ACAN,HAPLN3,ACAN	-5346,85963,-5346
chr7:153102351-153102593	chr7	+	153102351	153102615	True	NM_005431,NM_001039350	chr7,chr7	-,+	XRCC2,DPP6	-729101,481803
chr17:42420319-42420637	chr17	+	42420348	42420683	True	NM_002087,NM_016016	chr17,chr17	+,-	GRN,SLC25A39	1807,-18131
chr10:88717856-88719109	chr10	+	88717911	88719103	True	NM_003087,NM_024756,NM_006829	chr10,chr10,chr10	+,-,+	SNCG,MMRN2,C10orf116	-66,-486,9084
chr10:134002030-134002676	chr10	+	134002120	134002605	True	NM_006426,NM_173575	chr10,chr10	+,-	DPYSL4,STK32C	-1757,118923
chrX:154281302-154281620	chrX	+	154281506	154281674	True	NM_001018024,NM_001018055	chrX,chrX	-,+	MTCP1NB,BRCC3	17931,18035
chr2:62728400-62729607	chr2	+	62728401	62729625	True	NM_198276,NM_001142615	chr2,chr2	-,+	TMEM17,EHBP1	4029,171360
chr1:230797130-230798452	chr1	+	230797239	230798413	True	NM_007357,NM_000029	chr1,chr1	+,-	COG2,AGT	-19101,51979
chr19:5825110-5825376	chr19	+	5825177	5825409	True	NM_004558,NM_000150	chr19,chr19	+,-	NRTN,FUT6	-1410,14383
chr18:14975633-14975909	chr18	+	14975664	14975938	True	NR_027417,NR_036153	chr18,chr18	-,+	LOC644669,MIR3156-2	350030,-145550
chr22:21986838-21987447	chr22	+	21986948	21987396	True	NM_152612,NM_001017964,NM_022044	chr22,chr22,chr22	+,-,+	CCDC116,YDJC,SDF2L1	-47,-2608,9145
chr2:152276135-152277775	chr2	+	152276353	152277675	True	NM_004688,NM_001177665	chr2,chr2	-,+	NMI,RIF1	-129923,-9800
chrX:154300259-154300702	chrX	+	154300312	154300723	True	NM_001018024,NM_024332,NM_001018055,NM_001018025	chrX,chrX,chrX,chrX	-,+,+,-	MTCP1NB,BRCC3,BRCC3,MTCP1	-765,-654,-654,-765
chr22:25053464-25054034	chr22	+	25053543	25053757	True	NR_024593,NR_024494	chr22,chr22	-,+	POM121L10P,BCRP3	1407,-24712
chr22:25053464-25054034	chr22	-	24648945	24649021	False	NM_001099782,NM_001099781,NM_004121,NR_003714	chr22,chr22,chr22,chr22	-,-,-,+	GGT5,GGT5,GGT5,POM121L9P	-7835,-7835,-7835,-1407
chr14:45718928-45720064	chr14	+	45719197	45719940	True	NM_018353,NM_020937	chr14,chr14	-,+	MIS18BP1,FANCM	2716,-114112
chr17:8658882-8659103	chr17	+	8658901	8659125	True	NM_004822,NM_001128076	chr17,chr17	+,-	NTN1,SPDYE4	265733,2802
chrX:48110232-48111823	chrX	+	48110523	48111603	True	NM_175723,NM_005635	chrX,chrX	-,+	SSX5,SSX1	-54324,3193
chr16:81274732-81275099	chr16	+	81274928	81275066	True	NM_017429,NM_001076780	chr16,chr16	+,-	BCMO1,PKD1L2	-2685,-20953
chr10:111287445-111288126	chr10	+	111287711	111288155	True	NM_019903,NM_001167604	chr10,chr10	+,-	ADD3,XPNPEP1	477570,395206
chr2:228006544-228008107	chr2	+	228006583	228008148	True	NM_000091,NM_000092	chr2,chr2	+,-	COL4A3,COL4A4	21132,21177
chr1:36690656-36691341	chr1	+	36690664	36691375	True	NM_014408,NM_005119	chr1,chr1	-,+	TRAPPC3,THRAP3	-75597,-700
chr13:46038287-46038823	chr13	+	46038528	46038862	True	NM_001204476,NM_001010875,NM_031431	chr13,chr13,chr13	+,-,+	COG3,SLC25A30,COG3	167,-46012,167
chr15:56211900-56212561	chr15	+	56211899	56212590	True	NM_198400,NM_198524	chr15,chr15	-,+	NEDD4,TEX9	-2570,445053
chr4:42895330-42896735	chr4	+	42895423	42896602	True	NM_001080476,NM_006095	chr4,chr4	+,-	GRXCR1,ATP8A1	-191,-236301
chr11:66884122-66885274	chr11	+	66884165	66885182	True	NM_012308,NM_001040716,NR_027473	chr11,chr11,chr11	+,-,+	KDM2A,PC,KDM2A	1557,-158318,1557
chr5:177031581-177031891	chr5	+	177031659	177031823	True	NR_024019,NM_007255	chr5,chr5	-,+	FAM193B,B4GALT7	-50111,-4591
chrX:154443867-154444712	chrX	+	154443899	154444579	True	NM_003372,NM_171998	chrX,chrX	+,-	VBP1,RAB39B	121,49323
chr19:36004198-36005162	chr19	+	36004546	36005022	True	NM_001126059,NM_001190348,NM_001126058,NM_001126057,NM_001126056,NM_001190349,NM_001190347,NR_033746,NM_014364,NM_033317	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,-,+,-	DMKN,DMKN,DMKN,DMKN,DMKN,DMKN,DMKN,DMKN,GAPDHS,DMKN	-3155,14,14,14,14,14,14,-3134,19291,14
chr8:16049570-16050529	chr8	+	16049613	16050418	True	NM_002445,NM_138716,NM_138715,NM_178234	chr8,chr8,chr8,chr8	-,-,-,+	MSR1,MSR1,MSR1,TUSC3	44,44,44,-652082
chr6:35888840-35889048	chr6	+	35888840	35889006	True	NR_034069,NM_139013,NM_003137	chr6,chr6,chr6	-,+,-	SRPK1,MAPK14,SRPK1	1,106447,1
chr6:112575964-112576340	chr6	+	112576022	112576388	True	NM_001013734,NM_001105209,NM_001105208,NM_002290,NM_001105207,NM_001105206	chr6,chr6,chr6,chr6,chr6,chr6	+,-,-,-,-,-	RFPL4B,LAMA4,LAMA4,LAMA4,LAMA4,LAMA4	92143,-194,-194,-194,-194,-194
chr10:12876307-12876611	chr10	+	12876441	12876591	True	NR_027322,NM_031455	chr10,chr10	+,-	LOC283070,CCDC3	-1359,167163
chr17:58156801-58157035	chr17	+	58156807	58157075	True	NM_000717,NR_030732,NM_022070	chr17,chr17,chr17	+,-,-	CA4,LOC645638,HEATR6	70226,8803,-515
chr7:129252997-129253458	chr7	+	129253001	129253306	True	NR_029614,NM_005011	chr7,chr7	-,+	MIR182,NRF1	157091,-1497
chr10:119303036-119303241	chr10	+	119303141	119303211	True	NM_004098,NR_002791,NM_001165924	chr10,chr10,chr10	+,-,+	EMX2,EMX2OS,EMX2	-1236,1418,-1236
chr5:149536730-149537914	chr5	+	149536836	149537756	True	NM_001804,NM_002609	chr5,chr5	+,-	CDX1,PDGFRB	8587,-1414
chr5:37087475-37087717	chr5	+	37087496	37087578	True	NM_133433,NM_023073	chr5,chr5	+,-	NIPBL,C5orf42	-210686,162006
chrX:37664538-37665659	chrX	+	37664907	37665682	True	NM_000397,NM_006520	chrX,chrX	+,-	CYBB,DYNLT3	-25689,41257
chr10:6246448-6247445	chr10	+	6246652	6247324	True	NM_004566,NM_000417	chr10,chr10	+,-	PFKFB3,IL2RA	-1863,-142319
chr7:16791476-16793243	chr7	+	16791528	16793094	True	NM_006408,NM_014399	chr7,chr7	-,+	AGR2,TSPAN13	51694,256
chr1:160081876-160082138	chr1	+	160081917	160081999	True	NM_052868,NM_000702	chr1,chr1	-,+	IGSF8,ATP1A2	-13509,3520
chr16:15190751-15191353	chr16	+	15191167	15191227	True	NM_018427,NM_015027	chr16,chr16	-,+	RRN3,PDXDC1	-3009,-122389
chr15:90234255-90234670	chr15	+	90234368	90234682	True	NM_003847,NM_020212	chr15,chr15	-,+	PEX11A,WDR93	-410,-391
chr16:3066807-3067298	chr16	+	3067075	3067347	True	NM_024339,NM_001142350,NM_017885,NM_001002017,NM_001002018,NM_021195,NM_020982,NM_016639	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,-,-,-,-,+,+	THOC6,THOC6,HCFC1R1,HCFC1R1,HCFC1R1,CLDN6,CLDN9,TNFRSF12A	6684,6684,6990,6990,6990,891,-4674,2965
chr1:76262956-76263404	chr1	+	76263054	76263278	True	NM_080868,NM_002440,NR_002749,NR_002748	chr1,chr1,chr1,chr1	-,+,+,+	ASB17,MSH4,SNORD45A,SNORD45B	134900,-482,-9538,-7950
chr19:51516771-51517509	chr19	+	51516974	51517554	True	NM_012315,NM_145888,NM_001077500,NM_002776,NM_014441	chr19,chr19,chr19,chr19,chr19	-,-,-,-,+	KLK9,KLK10,KLK10,KLK10,SIGLEC9	-4084,5450,5927,5778,110582
chr16:2256382-2256685	chr16	+	2256390	2256618	True	NM_001199174,NM_001199175,NM_001199173,NM_182563,NM_022372,NM_020764,NM_001042371	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,-,+,-,-	MLST8,MLST8,MLST8,C16orf79,MLST8,CASKIN1,PGP	-709,-1263,-1263,4501,-1263,-9925,8254
chr5:80600003-80600204	chr5	+	80600086	80600247	True	NM_032280,NR_034122,NR_034123,NR_034121,NM_001131035,NM_001131036	chr5,chr5,chr5,chr5,chr5,chr5	+,-,-,-,+,+	ZCCHC9,LOC100131067,LOC100131067,LOC100131067,ZCCHC9,ZCCHC9	-2750,-2698,-2698,-2698,-2750,-2750
chr16:69224873-69225634	chr16	+	69224878	69225539	True	NM_006750,NR_033227	chr16,chr16	+,-	SNTB2,CHTF8	-3880,-58385
chrX:50037026-50038551	chrX	+	50037379	50038592	True	NM_003886,NM_033031,NM_033670	chrX,chrX,chrX	-,+,+	AKAP4,CCNB3,CCNB3	-71715,-9903,-9903
chr2:145090622-145092388	chr2	+	145090775	145092305	True	NR_033870,NM_001164629	chr2,chr2	+,-	DKFZp686O1327,GTDC1	333228,-692
chr2:162272311-162273300	chr2	+	162272363	162273241	True	NM_006593,NM_001935	chr2,chr2	+,-	TBR1,DPP4	-17,657861
chr5:79721983-79722997	chr5	+	79722598	79722672	True	NR_003665,NM_014733	chr5,chr5	-,+	CRSP8P,ZFYVE16	-74813,-18821
chr17:44248788-44249452	chr17_ctg5_hap1	-	616936	617491	False	NM_001193466,NR_034172	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	KIAA1267,LOC644246	-20816,-21550
chr17:44248788-44249452	chr17_ctg5_hap1	-	1345483	1346038	False	NR_002940,NM_016632	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LRRC37A4,ARL17A	135338,167896
chr17:44248788-44249452	chr17	+	44248787	44249406	True	NM_001193466,NR_034172	chr17,chr17	-,+	KIAA1267,LOC644246	20811,21532
chr7:153585616-153587520	chr7	+	153585725	153587431	True	NM_007349,NM_001039350	chr7,chr7	-,+	PAXIP1,DPP6	1207301,-1357
chr19:52255411-52255926	chr19	+	52255443	52255800	True	NM_002029,NM_001193306,NM_001005738	chr19,chr19,chr19	-,-,+	FPR1,FPR1,FPR2	-293,-293,8652
chr15:40856312-40856847	chr15	+	40856366	40856778	True	NM_052849,NM_001080792,NM_001080791,NM_152260	chr15,chr15,chr15,chr15	-,-,-,+	C15orf57,C15orf57,C15orf57,RPUSD2	524,524,524,4758
chr3:114867239-114868212	chr3	+	114867259	114868036	True	NM_001130064,NM_015642	chr3,chr3	+,-	GAP43,ZBTB20	474114,-1132
chr1:27693780-27695016	chr1	+	27693970	27694936	True	NM_003665,NM_005281,NM_004672,NM_173452	chr1,chr1,chr1,chr1	-,+,-,-	FCN3,GPR3,MAP3K6,FCN3	6429,24215,-633,6429
chr3:50329873-50330823	chr3	+	50329885	50330799	True	NM_001200016,NM_001200029,NM_003549,NM_001200030,NM_001200031,NM_001200032,NM_012191,NM_001200018,NM_153215,NM_006764	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,-,-,-,-,+,-	NAT6,HYAL3,HYAL3,HYAL3,HYAL3,HYAL3,NAT6,NAT6,C3orf45,IFRD2	6103,5544,6150,6150,6150,6150,6103,5571,-13418,-55
chr6:26249557-26250279	chr6	+	26249739	26250282	True	NM_003547,NM_021018,NM_003540,NM_003524	chr6,chr6,chr6,chr6	-,-,+,+	HIST1H4G,HIST1H3F,HIST1H4F,HIST1H2BH	-2534,604,-9143,1596
chr4:15442482-15443567	chr4	+	15442852	15443231	True	NM_001193534,NM_031911	chr4,chr4	-,+	FBXL5,C1QTNF7	213867,-13281
chr10:97469427-97469643	chr10	+	97469427	97469489	True	NM_001143973,NM_001098175	chr10,chr10	-,+	TCTN3,ENTPD1	-15527,2046
chr18:24410105-24411703	chr18	+	24410481	24411540	True	NM_004028,NR_026908	chr18,chr18	-,+	AQP4,C18orf16	31085,33731
chr11:68051285-68053214	chr11	+	68051646	68052963	True	NM_022338,NM_002335	chr11,chr11	-,+	C11orf24,LRP5	-12177,27144
chr18:14743519-14744873	chr18	+	14743681	14744891	True	NM_001145029,NM_001137671	chr18,chr18	+,-	ANKRD30B,POTEC	3347,-200082
chr15:57003717-57005231	chr15	+	57003874	57004942	True	NM_003205,NM_001002843	chr15,chr15	+,-	TCF12,ZNF280D	205890,20901
chr19:14229258-14230566	chr19	+	14229352	14230532	True	NR_024282,NM_207518,NM_002730	chr19,chr19,chr19	+,-,-	LOC113230,PRKACA,PRKACA	-45582,-4360,-793
chr11:117859388-117859769	chr11	+	117859393	117859818	True	NR_026691,NM_001077263,NM_001558	chr11,chr11,chr11	+,-,+	IL10RA,TMPRSS13,IL10RA	-2338,-59278,-2338
chr3:169901216-169901484	chr3	+	169901295	169901433	True	NM_002740,NM_024947	chr3,chr3	+,-	PRKCI,PHC3	38786,-1758
chr17:71825498-71825995	chr17	+	71825533	71826043	True	NM_000999,NR_027146	chr17,chr17	+,-	RPL38,C17orf54	373751,-857
chr19:56153709-56153919	chr19	+	56153723	56153785	True	NM_016535,NM_016202,NM_013301,NM_001163423,NM_203374,NM_207115	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,-,+	ZNF581,ZNF580,CCDC106,ZNF580,ZNF784,ZNF580	1200,-356,5168,-311,-17782,-1382
chr2:132286536-132286912	chr2	+	132286649	132286861	True	NM_001085365,NM_138770	chr2,chr2	-,+	MZT2A,CCDC74A	-36585,-1208
chr2:132286536-132286912	chr2	-	130901309	130901359	False	NM_207310,NR_033903	chr2,chr2	-,+	CCDC74B,LOC285103	1322,-14164
chr3:52010127-52010327	chr3	+	52010131	52010239	True	NM_001198898,NM_001198896,NM_000666,NM_001174100,NM_001198895,NM_001146314,NR_027476,NM_015407,NM_001198897,NR_037192,NM_033008,NM_032750,NM_020418	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,-,+,-,-,+,+,+,-,-,-	ACY1,ACY1,ACY1,PCBP4,ACY1,ABHD14B,ABHD14B,ABHD14A,ACY1,ABHD14A-ACY1,PCBP4,ABHD14B,PCBP4	7060,7060,7060,-8649,7060,-1485,-1485,-1140,7060,-1140,-8649,-1485,-8681
chr5:69710573-69710989	chr5	+	69710685	69711005	True	NR_033417,NR_033968	chr5,chr5	+,-	GTF2H2B,LOC100049076	191,140195
chr5:69710573-69710989	chr5	-	70363692	70364012	False	NM_022877,NM_001515	chr5,chr5	+,-	SMN2,GTF2H2	-142975,-195
chr5:69710573-69710989	chr5	+	68855644	68856171	False	NR_027439,NM_001042490,NM_001098728	chr5,chr5,chr5	-,+,+	LOC100272216,GTF2H2D,GTF2H2C	73220,-98,-121
chr22:44289669-44290348	chr22	+	44289684	44290366	True	NM_001177675,NM_025225,NM_138814	chr22,chr22,chr22	-,+,-	PNPLA5,PNPLA3,PNPLA5	-1791,29252,-1791
chr3:73673260-73673678	chr3	+	73673274	73673690	True	NM_018029,NM_015009	chr3,chr3	+,-	EBLN2,PDZRN3	-562515,432
chr17:76248933-76249493	chr17	+	76249101	76249531	True	NR_002219,NM_001204210	chr17,chr17	-,+	EPR1,TMEM235	-28318,-21761
chr10:1105659-1107339	chr10	+	1105766	1107131	True	NM_004508,NM_014023	chr10,chr10	-,+	IDI1,WDR37	-10705,-3054
chr11:5703320-5704138	chr11	+	5703532	5704002	True	NM_033092,NM_033093,NM_033034,NM_006074,NM_001199573	chr11,chr11,chr11,chr11,chr11	-,-,-,+,+	TRIM5,TRIM5,TRIM5,TRIM22,TRIM22	2388,2388,2388,6814,6814
chr15:57882778-57883668	chr15	+	57882945	57883596	True	NM_152451,NM_001018100,NM_001018091,NM_001018090,NM_170697	chr15,chr15,chr15,chr15,chr15	+,+,+,+,-	GCOM1,GCOM1,GCOM1,GCOM1,ALDH1A2	505,505,505,505,422690
chr7:142959802-142960457	chr7	+	142959888	142960335	True	NM_001143680,NM_001143681,NM_001143679,NM_015917,NM_014690	chr7,chr7,chr7,chr7,chr7	+,+,+,+,-	GSTK1,GSTK1,GSTK1,GSTK1,FAM131B	186,186,186,186,98888
chr11:30606278-30606621	chr11	+	30606302	30606649	True	NM_001145399,NM_001584,NM_152316	chr11,chr11,chr11	-,-,+	MPPED2,MPPED2,C11orf46	1331,-4262,-261704
chrX:46429863-46431245	chrX	+	46430608	46431032	True	NM_001190417,NM_019886	chrX,chrX	-,+	ZNF674,CHST7	-25716,2159
chr2:134320861-134321511	chr2	+	134321198	134321423	True	NM_207363,NM_207481,NR_037450	chr2,chr2,chr2	-,-,+	NCKAP5,NCKAP5,MIR3679	4659,4659,563272
chr13:31193325-31194525	chr13	+	31193466	31194364	True	NM_005800,NM_002128	chr13,chr13	+,-	USPL1,HMGB1	-1687,-153385
chr4:89205820-89206605	chr4	+	89206095	89206623	True	NM_001165136,NM_152542	chr4,chr4	+,-	HERC6,PPM1K	93267,-207
chr17:41323953-41325136	chr17	+	41323969	41324536	True	NM_007300,NM_031858,NM_005899,NM_031862	chr17,chr17,chr17,chr17	-,+,+,+	BRCA1,NBR1,NBR1,NBR1	-46469,-1509,-774,-1522
chr11:2019710-2020063	chr11	+	2019710	2020112	True	NR_002196,NR_024471,NR_030533,NM_021134	chr11,chr11,chr11,chr11	-,-,-,+	H19,LOC100133545,MIR675,MRPL23	-645,-8560,-1649,-51259
chr8:12992568-12992983	chr8	+	12992607	12993031	True	NM_001099677,NM_006094	chr8,chr8	+,-	KIAA1456,DLC1	-122885,-1798
chr15:85359729-85360050	chr15	+	85359828	85359988	True	NM_014300,NM_020778	chr15,chr15	-,+	SEC11A,ALPK3	-100154,16
chr7:156742940-156743155	chr7	+	156742971	156743089	True	NM_022458,NM_138400	chr7,chr7	-,+	LMBR1,NOM1	-57069,-605
chr12:51566707-51566909	chr12	+	51566733	51566955	True	NM_005653,NM_001136264,NM_001173453,NM_001173452	chr12,chr12,chr12,chr12	-,+,-,-	TFCP2,DAZAP2,TFCP2,TFCP2	21,65552,21,21
chr7:150026463-150027454	chr7	+	150026477	150027183	True	NM_001142928,NM_138434,NM_001164458,NM_023942	chr7,chr7,chr7,chr7	+,+,-,+	LRRC61,C7orf29,ACTR3C,LRRC61	-6232,-18,-5719,-6232
chr5:154132421-154134204	chr5	+	154132629	154134074	True	NM_015315,NM_032385	chr5,chr5	+,-	LARP1,C5orf4	-40218,96189
chr7:149153930-149154559	chr7	+	149153982	149154583	True	NM_015694,NR_036573	chr7,chr7	-,+	ZNF777,LOC155060	3533,-171661
chr16:30023319-30024181	chr16	+	30023500	30023824	True	NM_003586,NM_001109659	chr16,chr16	-,+	DOC2A,C16orf92	-1099,10830
chr7:128553212-128553836	chr7	+	128553480	128553766	True	NM_199349,NM_001098629,NM_001135914	chr7,chr7,chr7	-,+,-	KCP,IRF5,KCP	-2707,24227,-2707
chr7:128553212-128553836	chr7	-	128497667	128497809	False	NM_001198909,NM_001195150,NM_004231,NM_001135914	chr7,chr7,chr7,chr7	+,+,+,-	ATP6V1F,LOC100130705,ATP6V1F,KCP	5047,8654,5047,53014
chr9:101982808-101983807	chr9	+	101983063	101983756	True	NM_006808,NR_024532,NM_033087	chr9,chr9,chr9	+,-,-	SEC61B,ALG2,ALG2	813,540,540
chr9:125703326-125703618	chr9	+	125703326	125703532	True	NM_012197,NM_020924	chr9,chr9	+,-	RABGAP1,ZBTB26	-89,-9547
chr20:49254894-49255498	chr20	+	49254963	49255489	True	NR_030375,NM_080829	chr20,chr20	+,-	MIR645,FAM65C	-52698,-1537
chr19:18284564-18284905	chr19	+	18284589	18284799	True	NM_002866,NM_006332	chr19,chr19	-,+	RAB3A,IFI30	30125,-61
chr17:8816951-8817216	chr17	+	8817044	8817204	True	NM_004822,NM_014308	chr17,chr17	+,-	NTN1,PIK3R5	107654,-1210
chr1:26855193-26855446	chr1	+	26855250	26855452	True	NM_002953,NM_173574	chr1,chr1	+,-	RPS6KA1,ZNF683	796,-155984
chr4:24800955-24801180	chr4	+	24800959	24801229	True	NM_001130726,NM_003102	chr4,chr4	-,+	CCDC149,SOD3	113421,-3925
chr14:74707803-74708028	chr14	+	74707849	74708076	True	NM_182894,NM_005050	chr14,chr14	+,-	VSX2,ABCD4	-1725,61741
chr8:144925584-144926410	chr8	+	144925590	144926384	True	NR_033849,NM_178564	chr8,chr8	+,-	LOC100128338,NRBP2	-109331,-2444
chr1:26857153-26857843	chr1	+	26857339	26857787	True	NM_002953,NM_173574	chr1,chr1	+,-	RPS6KA1,ZNF683	-1141,-158073
chr2:198299279-198300150	chr2	+	198299396	198300032	True	NM_025147,NM_001005526,NM_012433	chr2,chr2,chr2	+,-,-	COQ10B,SF3B1,SF3B1	18198,51,51
chr3:14586207-14587892	chr3	+	14586247	14587889	True	NM_016474,NM_001080423	chr3,chr3	+,-	C3orf19,GRIP2	105363,-2659
chr17:38573975-38574283	chr17	+	38574009	38574282	True	NM_001552,NM_001067	chr17,chr17	+,-	IGFBP4,TOP2A	25393,3
chr8:22421806-22422395	chr8	+	22421810	22422368	True	NR_027715,NM_001018003	chr8,chr8	-,+	FLJ14107,SORBS3	77404,810
chr1:172510601-172511376	chr1	+	172510603	172511201	True	NM_016227,NM_153747,NM_014283	chr1,chr1,chr1	+,-,+	C1orf9,PIGC,C1orf9	-8338,-97373,-8395
chr18:59992767-59992991	chr18	+	59992811	59993025	True	NM_176787,NM_003839	chr18,chr18	-,+	PIGN,TNFRSF11A	-138522,-314
chr20:31455986-31456511	chr20	+	31456158	31456427	True	NM_012325,NM_053041	chr20,chr20	+,-	MAPRE1,COMMD7	-48510,-124344
chr18:66383423-66385103	chr18	+	66383428	66384792	True	NM_019022,NM_001093729	chr18,chr18	-,+	TMX3,CCDC102B	-1075,-991
chr20:48424187-48424774	chr20	+	48424227	48424565	True	NM_004776,NM_015266	chr20,chr20	-,+	B4GALT5,SLC9A8	-93806,4684
chr4:15938091-15940073	chr4	+	15938439	15940047	True	NM_005130,NM_001775	chr4,chr4	-,+	FGFBP1,CD38	-25,-158559
chr22:51111278-51111569	chr22	+	51111466	51111618	True	NM_001080420,NM_001085428	chr22,chr22	+,-	SHANK3,ARSA	1451,-44865
chr19:49243309-49243789	chr19	+	49243313	49243809	True	NM_019113,NM_017805,NM_182575	chr19,chr19,chr19	+,-,-	FGF21,RASIP1,IZUMO1	15534,211,6407
chr7:140910185-140912050	chr7	+	140910363	140911827	True	NM_053035,NM_001195278	chr7,chr7	-,+	MRPS33,LOC100131199	-195582,-136382
chr2:149633976-149634401	chr2	+	149634006	149634303	True	NM_015702,NM_004522	chr2,chr2	-,+	MMADHC,KIF5C	810078,-1238
chr8:1991600-1992352	chr8	+	1991721	1992275	True	NR_033895,NM_003970	chr8,chr8	-,+	LOC286083,MYOM2	-740894,882
chr1:155534834-155536497	chr1	+	155535276	155536063	True	NR_027023,NM_018489	chr1,chr1	+,-	LOC645676,ASH1L	-3560,-2952
chr8:86245200-86247073	chr8	+	86245806	86246705	True	NM_198584,NM_001164830	chr8,chr8	+,-	CA13,CA1	-88142,7295
chr10:43935588-43935961	chr10	+	43935779	43935839	True	NR_026693,NM_001098204	chr10,chr10	+,-	ZNF487P,HNRNPF	-3256,-31083
chr19:56343642-56343856	chr19	+	56343651	56343857	True	NM_145007,NM_134444	chr19,chr19	-,+	NLRP11,NLRP4	4321,4086
chr17:8027093-8027390	chr17	+	8027194	8027426	True	NM_001165967,NR_036201,NM_021628,NM_001165960,NM_032580	chr17,chr17,chr17,chr17,chr17	-,+,-,-,-	HES7,MIR4314,ALOXE3,ALOXE3,HES7	34,-35871,-5334,-4960,34
chr3:49314215-49314571	chr3	+	49314216	49314478	True	NM_198562,NR_036233	chr3,chr3	-,+	C3orf62,MIR4271	80,-2714
chr1:3540103-3540550	chr1	+	3540126	3540594	True	NM_001409,NM_182752	chr1,chr1	-,+	MEGF6,TPRG1L	-12067,961
chr2:89071283-89071759	chr2	+	89071499	89071665	True	NM_004836,NR_015424	chr2,chr2	-,+	EIF2AK3,ANKRD36BP2	-144405,-6143
chr1:62902253-62902484	chr1	+	62902284	62902532	True	NM_001017415,NM_001017416,NM_181712,NM_003368	chr1,chr1,chr1,chr1	+,+,-,+	USP1,USP1,KANK4,USP1	-360,-360,-117201,0
chr16:30314269-30315246	chr16	+	30314680	30314822	True	NM_013292,NR_002473	chr16,chr16	+,-	MYLPF,LOC440354	71300,2478
chr16:30314269-30315246	chr16	+	18905720	18905802	False	NM_015092,NM_024847	chr16,chr16	-,+	SMG1,TMC7	31992,89453
chr16:30314269-30315246	chr16	+	29575048	29575118	False	NM_001030288,NR_002473	chr16,chr16	+,-	SPN,LOC440354	99181,2478
chr3:62110374-62111471	chr3	+	62110573	62111451	True	NM_020685,NR_026582	chr3,chr3	+,-	C3orf14,ID2B	193944,-181
chr19:13985769-13986490	chr19	+	13985881	13986366	True	NR_030179,NM_001098622,NR_029613,NM_024323	chr19,chr19,chr19,chr19	+,+,+,-	MIR181D,NANOS3,MIR181C,C19orf57	-243,1583,-419,30597
chr22:18597061-18597943	chr22	+	18597171	18597696	True	NM_001136004,NM_001193414,NM_018943	chr22,chr22,chr22	-,+,+	MICAL3,TUBA8,TUBA8	-89846,-3769,-3769
chr12:48919482-48920485	chr12	+	48919549	48920279	True	NM_001005203,NM_002289	chr12,chr12	+,-	OR8S1,LALBA	-185,43600
chr7:30177281-30177822	chr7	+	30177290	30177678	True	NM_017946,NM_152793	chr7,chr7	-,+	FKBP14,C7orf41	-111022,-2789
chr4:4386134-4387611	chr4	+	4386229	4387490	True	NM_017816,NM_014392,NM_001040101	chr4,chr4,chr4	-,+,+	LYAR,D4S234E,D4S234E	-94333,492,492
chr7:27164058-27164415	chr7	+	27164161	27164395	True	NM_030661,NM_153631,NR_002795,NM_002141	chr7,chr7,chr7,chr7	-,-,+,-	HOXA3,HOXA3,HOXA11-AS1,HOXA4	-4947,2294,60631,6054
chr6:90602906-90604354	chr6	+	90603190	90604250	True	NM_014611,NM_032602	chr6,chr6	-,+	MDN1,GJA10	-73748,32
chr1:110162113-110162483	chr1	+	110162149	110162353	True	NM_139156,NM_005272,NM_203404,NM_004037	chr1,chr1,chr1,chr1	+,-,+,+	AMPD2,GNAT2,AMPD2,AMPD2	105,-6444,5695,922
chr22:50493411-50493937	chr22	+	50493563	50493801	True	NM_139202,NM_001164104	chr22,chr22	-,+	MLC1,MOV10L1	30031,34633
chr12:53228249-53230146	chr12	+	53228677	53230079	True	NM_199187,NM_175834	chr12,chr12	+,-	KRT18,KRT79	112575,-600
chr9:124856980-124857795	chr9	+	124857011	124857795	True	NM_001139442,NM_194252,NM_198469	chr9,chr9,chr9	-,-,+	TTLL11,TTLL11,MORN5	-1126,-1126,64394
chr11:66034862-66035084	chr11	+	66034914	66035026	True	NM_030981,NM_001134774,NM_022822,NM_001134776,NM_020470	chr11,chr11,chr11,chr11,chr11	+,+,+,+,-	RAB1B,KLC2,KLC2,KLC2,YIF1A	1029,-9791,-9791,-9874,21662
chr3:49835875-49836406	chr3	+	49836101	49836279	True	NM_001007540,NM_203370	chr3,chr3	-,+	CDHR4,C3orf54	1025,4407
chr19:53496983-53497847	chr19	+	53497002	53497250	True	NM_152473,NR_003578	chr19,chr19	+,-	HERV-V1,ZNF702P	20093,-218
chr10:114059391-114059640	chr10	+	114059404	114059625	True	NR_028134,NM_058222	chr10,chr10	-,+	GUCY2GP,TECTB	56791,-15962
chr10:25242495-25243780	chr10	+	25242634	25243824	True	NM_020200,NM_024838	chr10,chr10	-,+	PRTFDC1,THNSL1	-1101,61683
chr19:49148802-49149123	chr19	+	49149024	49149166	True	NM_001217,NM_001352,NR_004401	chr19,chr19,chr19	-,-,+	CA11,DBP,SEC1	335,-8385,-7779
chr13:42032422-42032633	chr13	+	42032447	42032613	True	NM_014059,NM_004294	chr13,chr13	+,-	C13orf15,MTRF1	-956,-194734
chr19:46417829-46418847	chr19	+	46417910	46418372	True	NM_004497,NM_001029861	chr19,chr19	+,-	FOXA3,NANOS2	-50443,-22
chr18:43652669-43654396	chr18	+	43652752	43653869	True	NM_024430,NM_138443	chr18,chr18	-,+	PSTPIP2,HAUS1	-502,30428
chr16:31045658-31046552	chr16	+	31045775	31046577	True	NM_004604,NM_052874	chr16,chr16	+,-	STX4,STX1B	-923,-23946
chrX:70982862-70983072	chrX	+	70982925	70983121	True	NR_001568,NM_001145140,NM_001145139	chrX,chrX,chrX	-,+,+	BCYRN1,CXorf49,CXorf49B	-33963,18,18
chrX:70982862-70983072	chrX	-	70938153	70938349	False	NR_034005,NM_001145140,NM_001145139	chrX,chrX,chrX	+,-,-	FLJ46446,CXorf49,CXorf49B	-21158,-18,-18
chr3:14995324-14996383	chr3	+	14995429	14996304	True	NM_022497,NM_003298	chr3,chr3	-,+	MRPS25,NR2C2	110575,-6244
chr3:167803394-167804501	chr3	+	167803410	167804532	True	NM_014498,NR_021485	chr3,chr3	-,+	GOLIM4,EGFEM1P	8935,162777
chr2:241756593-241757131	chr2	+	241756745	241757041	True	NM_000030,NM_004321	chr2,chr2	+,-	AGXT,KIF1A	51120,2633
chr1:115629833-115631655	chr1	+	115629904	115631257	True	NM_000549,NM_005725	chr1,chr1	+,-	TSHB,TSPAN2	-57540,914
chr8:59405034-59405960	chr8	+	59405038	59405976	True	NM_000780,NM_001007067	chr8,chr8	-,+	CYP7A1,SDCBP	6794,59751
chr10:118428430-118429457	chr10	+	118428490	118429294	True	NM_005396,NM_144661	chr10,chr10	+,-	PNLIPRP2,C10orf82	-48076,237
chr12:65005537-65005762	chr12	+	65005638	65005794	True	NR_037515,NM_178169	chr12,chr12	-,+	MIR548Z,RASSF3	10641,-1398
chr9:140120576-140120931	chr9	+	140120648	140120976	True	NM_001190228,NM_080877,NM_001177316,NM_001177317,NM_031297,NM_199001	chr9,chr9,chr9,chr9,chr9,chr9	+,+,+,+,-,+	LOC643596,SLC34A3,SLC34A3,SLC34A3,RNF208,C9orf169	1041,4408,4232,4232,-4873,-1055
chr14:90525902-90526801	chr14	+	90526065	90526799	True	NM_022054,NM_145231	chr14,chr14	+,-	KCNK13,EFCAB11	1308,-104976
chr12:109491018-109492248	chr12	+	109491057	109492025	True	NM_032663,NM_018711	chr12,chr12	+,-	USP30,SVOP	-728,-32212
chr8:145138363-145138759	chr8	+	145138502	145138720	True	NM_030974,NM_019037,NM_003801	chr8,chr8,chr8	-,+,+	SHARPIN,EXOSC4,GPAA1	20470,-5031,-1029
chr7:134331857-134332640	chr7	+	134331924	134332451	True	NM_001628,NM_001724,NM_199186	chr7,chr7,chr7	-,+,+	AKR1B1,BPGM,BPGM	-188036,-444,-444
chr6:39012584-39012936	chr6	+	39012865	39012957	True	NM_002062,NM_018322	chr6,chr6	+,-	GLP1R,C6orf64	3599,69958
chr5:10439111-10440154	chr5	+	10439146	10440114	True	NM_031916,NM_138809,NM_001201466	chr5,chr5,chr5	+,-,+	ROPN1L,CMBL,ROPN1L	1859,-130978,1859
chr11:131170370-131170573	chr11	+	131170396	131170480	True	NM_001048209,NM_014758	chr11,chr11	+,-	NTM,SNX19	69890,-384014
chr9:136240716-136242343	chr9	+	136240869	136242088	True	NM_153710,NM_033161	chr9,chr9	+,-	C9orf96,SURF4	1195,932
chr7:99063788-99064156	chr7	+	99063847	99063959	True	NM_213603,NM_001198879,NM_001003714,NM_001039178,NM_001003713,NM_001013258,NM_004889	chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,-,-,-,-,+,-	ZNF789,ATP5J2-PTCD1,ATP5J2,ATP5J2,ATP5J2,ZNF789,ATP5J2	6555,-23,-23,-23,-23,6555,-23
chrX:103030591-103031891	chrX	+	103030632	103031939	True	NM_000533,NM_001172285,NM_001128834,NM_199478	chrX,chrX,chrX,chrX	+,-,+,+	PLP1,GLRA4,PLP1,PLP1	-186,-47080,-63,-186
chr12:121414649-121415153	chr12	+	121414754	121414915	True	NR_024345,NM_000545	chr12,chr12	-,+	NCRNA00262,HNF1A	-4659,1633
chr19:55990583-55991945	chr19	+	55990797	55991607	True	NM_024710,NM_001144950,NM_020378,NM_033113,NM_001195267	chr19,chr19,chr19,chr19,chr19	-,+,+,+,+	ISOC2,SSC5D,NAT14,ZNF628,SSC5D	-17748,8262,4949,-3149,8262
chr19:55791621-55791856	chr19	+	55791649	55791857	True	NM_032430,NM_012267,NM_001130106	chr19,chr19,chr19	+,-,-	BRSK1,HSPBP1,HSPBP1	3676,42,42
chr17:2700094-2700617	chr17	+	2700107	2700617	True	NM_001100398,NM_015085,NR_031654	chr17,chr17,chr17	+,+,-	RAP1GAP2,RAP1GAP2,MIR1253	-426,-426,-48631
chr11:111412240-111412836	chr11	+	111412382	111412862	True	NM_178834,NM_017589	chr11,chr11	+,-	LAYN,BTG4	-1200,-29318
chr14:50052844-50053284	chr14	+	50052867	50053291	True	NM_001030001,NR_037792,NM_001032	chr14,chr14,chr14	-,+,-	RPS29,LRR1,RPS29	13,12123,13
chr5:176903419-176903706	chr5	+	176903425	176903751	True	NM_001174102,NM_080881,NM_004395	chr5,chr5,chr5	+,-,-	PRR7,DBN1,DBN1	-28150,-3554,-2731
chrX:137954543-137955460	chrX	+	137954664	137955509	True	NR_028597,NM_001139502	chrX,chrX	+,-	SRD5A1P1,FGF13	573468,-4947
chr22:41467616-41468424	chr22	+	41467888	41468293	True	NM_138481,NR_031694	chr22,chr22	-,+	CHADL,MIR1281	168697,20223
chr18:612428-612819	chr18	+	612556	612872	True	NM_199167,NM_001012716	chr18,chr18	+,-	CLUL1,C18orf56	3827,45522
chr11:123996035-123997505	chr11	+	123996325	123997540	True	NM_014622,NM_001004463	chr11,chr11	+,-	VWA5A,OR10G7	-10268,-86617
chr17:34090063-34090635	chr17	+	34090358	34090528	True	NM_145272,NM_139285	chr17,chr17	+,-	C17orf50,GAS2L2	-2493,-10461
chr3:57544870-57546346	chr3	+	57545059	57545893	True	NM_178504,NM_177966	chr3,chr3	-,+	DNAH12,PDE12	-14988,-3136
chr2:167165358-167165692	chr2	+	167165636	167165753	True	NM_001079810,NM_002977	chr2,chr2	+,-	XIRP2,SCN9A	579243,66807
chr1:210503800-210504083	chr1	+	210503802	210504004	True	NM_001170588,NM_018194,NM_001170580,NM_001170564,NM_001170587,NR_024337,NM_001122834	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-,+	HHAT,HHAT,HHAT,HHAT,HHAT,C1orf133,HHAT	-1604,-1604,-1214,-2258,-1604,-96336,-2258
chr9:122111866-122113013	chr9	+	122111961	122113043	True	NR_027442,NM_014618	chr9,chr9	+,-	LOC100288842,DBC1	1442731,18746
chr10:96163429-96164122	chr10	+	96163530	96164130	True	NM_022451,NM_015188	chr10,chr10	-,+	NOC3L,TBC1D12	-40847,-1395
chr21:34144076-34145060	chr21	+	34144323	34145098	True	NM_013329,NR_027873,NM_016631,NR_024622,NR_024623	chr21,chr21,chr21,chr21,chr21	-,-,-,+,+	GCFC1,GCFC1,GCFC1,C21orf49,C21orf49	-154,-154,-154,8,8
chr2:111144072-111144561	chr2	+	111144085	111144607	True	NR_037626,NR_027244	chr2,chr2	+,-	LOC100507334,LOC151009	-140921,-1972
chr2:111144072-111144561	chr2	-	110742047	110742569	False	NR_037627,NR_036225	chr2,chr2	+,-	LOC100288570,MIR4267	-36831,85100
chr19:1206722-1207228	chr19	+	1206726	1207175	True	NM_000455,NM_152769	chr19,chr19	+,-	STK11,C19orf26	-979,30865
chr15:25433916-25434409	chr15	+	25433965	25434363	True	NR_003358,NR_003298,NR_003305,NR_003344,NR_003351,NR_003299,NM_130838,NR_003300,NR_003301,NR_003302,NR_003303,NR_003304,NR_003297,NR_003306	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,-,+,+,+,+,+,+,+	SNORD115-43,SNORD115-6,SNORD115-13,SNORD115-29,SNORD115-36,SNORD115-7,UBE3A,SNORD115-8,SNORD115-9,SNORD115-10,SNORD115-11,SNORD115-12,SNORD115-5,SNORD115-14	197,-8372,4104,197,197,-6484,216340,-4563,2199,-1333,197,2199,2202,5704
chr10:111685542-111685990	chr10	+	111685549	111686025	True	NM_020383,NM_019903,NR_030724,NM_001167604	chr10,chr10,chr10,chr10	-,+,-,-	XPNPEP1,ADD3,XPNPEP1,XPNPEP1	-2238,79700,-2238,-2238
chr15:97322867-97323130	chr15	+	97322875	97323070	True	NM_173499,NR_024172	chr15,chr15	+,-	SPATA8,LOC91948	3608,1094640
chr11:57182707-57183119	chr11	+	57182801	57183160	True	NM_014096,NM_178570	chr11,chr11	-,+	SLC43A3,RTN4RL2	11420,45178
chr5:170209466-170209727	chr5	+	170209474	170209774	True	NM_014211,NM_004137	chr5,chr5	+,-	GABRP,KCNMB1	948,-392836
chr2:103037877-103039540	chr2	+	103038096	103039552	True	NM_003853,NM_032718	chr2,chr2	+,-	IL18RAP,MFSD9	-2893,313835
chr15:41707551-41708043	chr15	+	41707698	41707968	True	NM_016013,NM_015138	chr15,chr15	-,+	NDUFAF1,RTF1	-13056,1333
chr16:81527431-81527761	chr16	+	81527472	81527745	True	NM_001076780,NM_030629	chr16,chr16	-,+	PKD1L2,CMIP	-273497,1208
chr14:104098912-104099553	chr14	+	104099135	104099398	True	NM_005552,NM_182923,NM_001130107,NM_001015048	chr14,chr14,chr14,chr14	+,+,+,-	KLC1,KLC1,KLC1,BAG5	-3661,-3661,-3661,-69984
chr11:13031686-13031990	chr11	+	13031699	13031927	True	NM_001080521,NM_032320	chr11,chr11	+,-	RASSF10,BTBD10	-780,452961
chr1:220269860-220270310	chr1	+	220270030	220270119	True	NM_006085,NM_018060	chr1,chr1	-,+	BPNT1,IARS2	-6839,-2626
chr12:54474040-54474262	chr12	+	54474040	54474292	True	NR_026657,NR_026658	chr12,chr12	+,-	LOC100240734,LOC100240735	21700,1365
chr12:54474040-54474262	chr20	+	29522976	29523028	False	NM_001037731,NR_003579	chr20,chr20	-,+	DEFB116,FRG1B	373410,88850
chr16:88494817-88495135	chr16	+	88494975	88495041	True	NM_000101,NM_001127464	chr16,chr16	-,+	CYBA,ZNF469	222466,-1147
chr18:12707045-12708000	chr18	+	12707371	12707955	True	NM_020232,NM_024899	chr18,chr18	+,-	PSMG2,CEP76	-4443,-4668
chr2:234217897-234218657	chr2	+	234217896	234218652	True	NM_000541,NM_018218	chr2,chr2	+,-	SAG,USP40	-1646,255634
chr9:136023445-136024115	chr9	+	136023449	136024157	True	NR_001275,NM_001042368	chr9,chr9	+,-	CELP,RALGDS	-65574,481
chr7:152456257-152456536	chr7	+	152456319	152456544	True	NM_005431,NM_020445,NM_001040135	chr7,chr7,chr7	-,+,+	XRCC2,ACTR3B,ACTR3B	-83069,306,306
chr4:83547083-83547688	chr4	+	83547301	83547599	True	NR_024088,NM_021204,NR_024087	chr4,chr4,chr4	-,+,-	C4orf11,ENOPH1,C4orf11	-4711,-195633,-4711
chr6:116442557-116442830	chr6	+	116442602	116442856	True	NM_152729,NM_000493	chr6,chr6	+,-	NT5DC1,COL10A1	-20654,4490
chr19:29380010-29380215	chr19	+	29380021	29380167	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	75870,324019
chr2:119702005-119703079	chr2	+	119702380	119702972	True	NM_001426,NM_006770	chr2,chr2	-,+	EN1,MARCO	-96621,-2687
chr12:19590569-19591046	chr12	+	19590657	19591077	True	NM_033123,NM_153207,NM_001114176	chr12,chr12,chr12	-,+,+	PLCZ1,AEBP2,AEBP2	-699739,1530,1530
chr2:232648808-232649046	chr2	+	232648848	232648914	True	NM_022730,NM_002601	chr2,chr2	+,-	COPS7B,PDE6D	2247,-2874
chr4:15703514-15704968	chr4	+	15703575	15704678	True	NM_004334,NR_036464	chr4,chr4	+,-	BST1,FBXL5	-106,-46540
chr10:69835173-69836017	chr10	+	69835259	69835851	True	NM_015601,NM_032578,NM_022079	chr10,chr10,chr10	-,+,-	HERC4,MYPN,HERC4	-156,33398,-156
chr12:53994409-53994747	chr12	+	53994493	53994750	True	NM_001130059,NM_134324	chr12,chr12	-,+	ATF7,TARBP2	112,-99174
chr3:126277186-126277762	chr3	+	126277191	126277553	True	NM_152533,NM_152889	chr3,chr3	-,+	C3orf22,CHST13	255,-34066
chr3:197887546-197888179	chr7	-	27440	28049	False	NM_002607,NM_020223	chr7,chr7	-,+	PDGFA,FAM20C	531482,164919
chr3:197887546-197888179	chr3	+	197887554	197888163	True	NR_003291	chr3	-	LOC348840	-80012
chr3:197887546-197888179	chr16	+	90176131	90176740	False	NM_001098173,NR_023348	chr16,chr16	-,+	PRDM7,GAS8	-33793,-87174
chr3:197887546-197888179	chr9	+	141114796	141115405	False	NM_032937	chr9	-	C9orf37	-601488
chr10:72023322-72023850	chr10	+	72023340	72023529	True	NM_022146,NM_004096	chr10,chr10	-,+	NPFFR1,EIF4EBP2	19986,140331
chr1:40565187-40566749	chr1	+	40565448	40566370	True	NM_001142604,NM_006367,NM_000310	chr1,chr1,chr1	-,+,-	PPT1,CAP1,PPT1	-2306,-59249,-2306
chr1:110991095-110992685	chr1	+	110991100	110992677	True	NM_032414,NM_006402	chr1,chr1	+,-	PROK1,HBXIP	1110,-40554
chr14:24642154-24643166	chr14	+	24642183	24642911	True	NM_001048205,NM_024658,NM_005132	chr14,chr14,chr14	+,-,+	REC8,IPO4,REC8	-1000,15263,-1000
chr19:7969945-7970420	chr19	+	7969970	7970436	True	NM_206833,NM_145185	chr19,chr19	-,+	CTXN1,MAP2K7	20665,-1257
chr15:29210458-29210709	chr15	+	29210499	29210743	True	NM_001130414,NM_138704,NM_005503	chr15,chr15,chr15	+,-,+	APBA2,NDNL2,APBA2	3096,351324,3096
chr6:118823743-118825256	chr6	+	118823795	118825102	True	NM_001042475,NR_002730	chr6,chr6	-,+	C6orf204,BRD7P3	147984,-1310
chr5:156588354-156589871	chr5	+	156588675	156589899	True	NM_130899,NM_005546	chr5,chr5	-,+	FAM71B,ITK	3430,18007
chr6:39772550-39772995	chr6	+	39772579	39773029	True	NM_145027,NM_015345	chr6,chr6	-,+	KIF6,DAAM2	-79398,-11864
chr20:61148713-61148916	chr20	+	61148713	61148773	True	NR_033263,NR_029780,NM_178463	chr20,chr20,chr20	-,+,+	C20orf200,MIR1-1,C20orf166	45,2739,-1104
chrX:74661751-74662541	chrX	+	74661750	74661994	True	NM_001146256,NR_030774	chrX,chrX	-,+	ZDHHC15,UPRT	81401,-167907
chr14:65409363-65410751	chr14	+	65409606	65410590	True	NM_001202559,NM_002083	chr14,chr14	+,-	CHURC1-FNTB,GPX2	-28578,-75
chr5:133863664-133863972	chr5	+	133863688	133863990	True	NM_001033503,NM_015288	chr5,chr5	-,+	SAR1B,PHF15	104593,-1941
chrX:128785803-128786406	chrX	+	128785940	128786448	True	NM_017413,NM_003399	chrX,chrX	-,+	APLN,XPNPEP2	2535,86497
chr17:33475608-33476526	chr17	+	33475666	33476316	True	NM_018096,NM_173167,NM_001014445,NM_001033576	chr17,chr17,chr17,chr17	-,+,-,+	NLE1,UNC45B,NLE1,UNC45B	-6344,-881,-6344,-881
chr7:142583008-142583272	chr7	+	142583015	142583261	True	NM_004445,NM_018646	chr7,chr7	+,-	EPHB6,TRPV6	-30274,266
chr11:59578512-59579269	chr11	+	59578515	59578818	True	NM_004177,NM_017840	chr11,chr11	+,-	STX3,MRPL16	-56034,-170
chr17:18588792-18589715	chr17	+	18588791	18589409	True	NM_001145045,NM_001037330	chr17,chr17	-,+	ZNF286B,TRIM16L	-3219,35992
chr17:18588792-18589715	chr17	-	15599764	15599814	False	NM_006470,NM_001130842,NM_020652	chr17,chr17,chr17	-,+,+	TRIM16,ZNF286A,ZNF286A	-13571,3076,3076
chr8:145577601-145577846	chr8	+	145577604	145577844	True	NM_024531,NM_012162,NR_015428,NM_024555	chr8,chr8,chr8,chr8	+,-,-,-	GPR172A,FBXL6,C8ORFK29,FBXL6	4380,4338,711,4338
chr3:96532395-96532658	chr3	+	96532485	96532657	True	NM_001042533,NM_001080448	chr3,chr3	-,+	MINA,EPHA6	1158617,767
chr12:6948850-6949680	chr12	+	6948967	6949677	True	NM_002075,NM_031299	chr12,chr12	+,-	GNB3,CDCA3	97,10829
chr12:52603565-52604231	chr12	+	52603576	52604268	True	NM_182507,NR_027358	chr12,chr12	-,+	KRT80,LOC283404	-17792,445
chr17:7807866-7808963	chr17	+	7807868	7808980	True	NR_003000,NR_024349	chr17,chr17	+,-	SCARNA21,LOC284023	460,10335
chr2:3526839-3528329	chr2	+	3526993	3528157	True	NM_001011,NM_018269	chr2,chr2	+,-	RPS7,ADI1	94695,-3643
chr19:36498286-36498498	chr19	+	36498336	36498410	True	NM_198867,NM_032878,NM_001039876,NM_001042631	chr19,chr19,chr19,chr19	-,-,-,+	ALKBH6,ALKBH6,C19orf46,SDHAF1	6781,6781,1312,-12297
chr1:48938064-48938724	chr1	+	48938083	48938589	True	NM_001135181,NM_019073	chr1,chr1	+,-	SLC5A9,SPATA6	-249777,-207
chr17:41276921-41277272	chr17	+	41277184	41277318	True	NR_003108,NM_007299,NM_007298,NM_007297,NM_007294,NR_027676,NM_007300	chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,-,-,-,-	NBR2,BRCA1,BRCA1,BRCA1,BRCA1,BRCA1,BRCA1	281,200,-1052,200,232,72,232
chr19:54327996-54329489	chr19	+	54328446	54329263	True	NM_144687,NR_029866	chr19,chr19	-,+	NLRP12,MIR373	-798,-36538
chr11:66248883-66250655	chr11	+	66249021	66250406	True	NM_170739,NM_130443,NM_005700	chr11,chr11,chr11	-,+,+	MRPL11,DPP3,DPP3	-42711,-1192,-1192
chr19:12177654-12177906	chr19	+	12177654	12177767	True	NM_001136501,NM_001080404	chr19,chr19	+,-	ZNF844,ZNF878	-2160,-10527
chr17:55056616-55058071	chr17	+	55056635	55057819	True	NM_021626,NM_004645	chr17,chr17	+,-	SCPEP1,COIL	-1218,-18224
chr10:126849069-126849291	chr10	+	126849068	126849128	True	NM_001329,NM_001083914,NM_017580	chr10,chr10,chr10	-,-,+	CTBP2,CTBP2,ZRANB1	25,546,-218427
chr2:171923964-171924556	chr2	+	171923963	171924088	True	NM_015530,NM_001136555	chr2,chr2	+,-	GORASP2,TLK1	-138986,-480
chr7:20866432-20866985	chr7	+	20866465	20867021	True	NM_198956,NR_026673	chr7,chr7	-,+	SP8,RPL23P8	-39957,60
chr2:29095731-29097434	chr2	+	29095730	29096807	True	NM_017910,NM_015131	chr2,chr2	-,+	TRMT61B,WDR43	-2555,20725
chrX:83672017-83673101	chrX	+	83672324	83673128	True	NM_001177478,NR_024062	chrX,chrX	-,+	HDX,UBE2DNL	84409,516028
chr9:131589437-131589887	chr9	+	131589564	131589859	True	NM_016390,NM_004435	chr9,chr9	-,+	C9orf114,ENDOG	2277,-8836
chr1:16332850-16334727	chr1	+	16333175	16334750	True	NM_014424,NM_178840	chr1,chr1	-,+	HSPB7,C1orf64	10586,-2495
chr9:139837243-139837840	chr9	+	139837288	139837851	True	NM_000606,NM_018998,NM_178536	chr9,chr9,chr9	+,-,+	C8G,FBXW5,LCN12	1846,1372,8916
chr16:67875277-67875591	chr16	+	67875352	67875634	True	NM_025082,NM_020457,NM_005796	chr16,chr16,chr16	-,+,+	CENPT,THAP11,NUTF2	5777,578,5184
chr16:65613164-65613505	chr16	+	65613221	65613523	True	NM_001795,NR_027755	chr16,chr16	+,-	CDH5,LOC283867	787001,-3018
chr3:88204275-88204767	chr3	+	88204357	88204583	True	NM_173824,NM_001195308	chr3,chr3	+,-	C3orf38,CGGBP1	-5520,-5341
chr4:37956277-37957700	chr4	+	37956315	37957429	True	NM_006607,NM_001085400	chr4,chr4	+,-	PTTG2,RELL1	4626,-268316
chr20:2850936-2851989	chr20	+	2851052	2851920	True	NM_002836,NM_022760,NM_080840	chr20,chr20,chr20	+,-,+	PTPRA,FAM113A,PTPRA	-6262,-29720,2221
chr5:140020394-140020672	chr5	+	140020394	140020702	True	NM_001040021,NM_001174104,NM_001185012,NM_006083,NR_037428,NM_001174105,NM_018502,NM_002488,NM_000591,NR_033697	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,+,+,-,+,-,-,-	CD14,CD14,NDUFA2,IK,MIR3655,CD14,TMCO6,NDUFA2,CD14,NDUFA2	-7108,-7108,6718,6681,6726,-7108,-1441,6718,-7359,6718
chr1:159751278-159752063	chr1	+	159751315	159752089	True	NM_017823,NM_000567	chr1,chr1	+,-	DUSP23,CRP	-607,-66936
chr7:25727806-25728162	chr7	+	25727946	25728206	True	NR_029597,NM_004289	chr7,chr7	-,+	MIR148A,NFE2L3	261450,463640
chrX:106233821-106234989	chrX	+	106234243	106234834	True	NM_001085354,NM_020384,NM_024657	chrX,chrX,chrX	-,+,-	MORC4,CLDN2,MORC4	8691,-70696,8691
chr16:28859681-28860642	chr16	+	28859805	28860428	True	NM_003321,NM_001145795	chr16,chr16	-,+	TUFM,SH2B1	-2076,14649
chr5:33889979-33891746	chr5	+	33890138	33891655	True	NM_016568,NM_030955	chr5,chr5	+,-	RXFP3,ADAMTS12	44835,527
chr1:14744830-14745801	chr1	+	14744963	14745719	True	NM_015209,NR_027136	chr1,chr1	+,-	KAZN,C1orf126	179493,733291
chr17:39519999-39521056	chr17	+	39520122	39520934	True	NM_030975,NM_002279	chr17,chr17	+,-	KRTAP9-9,KRT33B	-108537,5163
chr5:95768624-95769061	chr5	+	95768653	95769065	True	NM_001190442,NM_001177875,NM_000439	chr5,chr5,chr5	+,-,-	CAST,PCSK1,PCSK1	228675,-790,0
chr17:65375178-65377047	chr17	+	65375279	65376653	True	NM_181671,NM_012417,NM_174871	chr17,chr17,chr17	+,+,-	PITPNC1,PITPNC1,PSMD12	-1406,-1406,-12558
chr19:4724718-4725013	chr19	+	4724717	4725012	True	NR_027148,NM_139159	chr19,chr19	+,-	C19orf30,DPP9	44104,-862
chr2:23637618-23639346	chr2	+	23637702	23639331	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	510653,-29468
chr2:31462040-31462609	chr2	+	31462231	31462617	True	NM_014600,NM_001145122	chr2,chr2	+,-	EHD3,CAPN14	-5402,-21820
chr17:40263398-40263814	chr17	+	40263442	40263822	True	NM_024119,NM_021078,NM_033194	chr17,chr17,chr17	-,-,+	DHX58,KAT2A,HSPB9	979,9610,10933
chr19:914745-915417	chr19	+	914973	915181	True	NM_138774,NM_032551	chr19,chr19	-,+	C19orf22,KISS1R	-1748,2160
chr2:26203832-26204180	chr2	+	26203866	26204172	True	NM_002254,NM_016131	chr2,chr2	-,+	KIF3C,RAB10	1321,52556
chr2:3624159-3624645	chr2	+	3624187	3624645	True	NM_001011,NM_002936	chr2,chr2	+,-	RPS7,RNASEH1	-1385,-18247
chr10:133798970-133799361	chr10	+	133798985	133799409	True	NM_004052,NR_033191	chr10,chr10	-,+	BNIP3,PPP2R2D	-3550,-51076
chr16:283677-284382	chr16	+	283905	284430	True	NM_201412,NM_018032,NM_032039	chr16,chr16,chr16	-,-,+	LUC7L,LUC7L,ITFG3	-4456,-4456,370
chr22:24199103-24199319	chr22	+	24199146	24199220	True	NM_198440,NM_001024939,NM_001024938,NM_030807	chr22,chr22,chr22,chr22	-,+,+,+	DERL3,SLC2A11,SLC2A11,SLC2A11	-17947,820,-138,-138
chr19:57987848-57988649	chr19	+	57987907	57988601	True	NM_001098491,NM_001144068,NM_001024596	chr19,chr19,chr19	+,-,-	ZNF419,ZNF772,ZNF772	10477,387,387
chr5:142811186-142812402	chr5	+	142811278	142812190	True	NM_021182,NM_001018077,NM_001018075,NM_001018074	chr5,chr5,chr5,chr5	+,-,-,-	HMHB1,NR3C1,NR3C1,NR3C1	379535,2939,2939,2939
chr7:142986187-142987448	chr7	+	142986228	142987012	True	NM_032983,NM_032982,NM_153345,NM_014690	chr7,chr7,chr7,chr7	+,+,+,-	CASP2,CASP2,TMEM139,FAM131B	-971,-971,-4216,72211
chr12:27930305-27931012	chr12	+	27930377	27930582	True	NM_001146221,NM_020782	chr12,chr12	-,+	LOC100287284,KLHDC5	-6168,2604
chr10:20105672-20105893	chr10	+	20105677	20105929	True	NM_006393,NM_032812	chr10,chr10	-,+	NEBL,PLXDC2	1080652,-356
chr1:199999008-199999334	chr1	+	199999016	199999375	True	NM_205860,NM_012482,NM_003822	chr1,chr1,chr1	+,-,+	NR5A2,ZNF281,NR5A2	-2297,379848,-2297
chr3:4344441-4344651	chr3	+	4344583	4344691	True	NR_024022,NM_001164674,NM_006515	chr3,chr3,chr3	+,-,+	SETMAR,SUMF1,SETMAR	605,164325,296
chr19:54588760-54589885	chr19	+	54588981	54589438	True	NM_004542,NM_001135686	chr19,chr19	+,-	NDUFA3,TARM1	16721,-4347
chr2:232062349-232062899	chr2	+	232062402	232062948	True	NM_025139,NM_000867	chr2,chr2	+,-	ARMC9,HTR2B	393,-72578
chr14:34420681-34421548	chr14	+	34420714	34421189	True	NR_002937,NM_022073	chr14,chr14	+,-	C14orf19,EGLN3	987938,-430
chr9:36136011-36136270	chr9	+	36136011	36136071	True	NM_001190383,NM_022343	chr9,chr9	-,+	GNE,GLIPR2	122475,670
chr8:37552782-37552991	chr8	+	37552816	37552876	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	424,52738
chr4:188867476-188867704	chr4	+	188867636	188867696	True	NM_173553,NM_174900	chr4,chr4	-,+	TRIML2,ZFP42	158762,49228
chr1:224299889-224301748	chr1	+	224300467	224301641	True	NM_001136115,NR_031574,NM_015176	chr1,chr1,chr1	+,-,+	FBXO28,MIR320B2,FBXO28	149,143258,149
chr10:51828906-51830645	chr10	+	51829360	51830182	True	NM_018232,NM_001005751,NM_001143974	chr10,chr10,chr10	+,+,-	FAM21B,FAM21A,ASAH2	7703,-1728,178238
chr10:51828906-51830645	chr10	+	46224544	46225185	False	NM_174890,NM_015262,NM_001169106,NM_001169107	chr10,chr10,chr10,chr10	-,+,+,+	ANUBL1,FAM21C,FAM21C,FAM21C	-56293,-1949,-1949,-1949
chr17:42733540-42733855	chr17	+	42733540	42733702	True	NM_001099225,NM_001145080	chr17,chr17	-,+	CCDC43,C17orf104	33513,59
chr7:112090279-112090729	chr7	+	112090285	112090723	True	NM_001197079,NM_014705,NM_001550	chr7,chr7,chr7	+,-,+	IFRD1,DOCK4,IFRD1	1389,-243823,-23
chr11:6793583-6794084	chr11	+	6793610	6794032	True	NM_001004490,NM_001004489	chr11,chr11	-,+	OR2AG2,OR2AG1	-3422,12215
chr20:35489856-35490203	chr20	+	35489870	35490184	True	NM_080628,NM_080627,NM_199181	chr20,chr20,chr20	+,-,-	C20orf118,KIAA0889,KIAA0889	14385,1953,-1594
chr17:26694126-26694367	chr17	+	26694130	26694397	True	NM_015584,NM_001080837,NM_000638,NM_152464,NM_015077	chr17,chr17,chr17,chr17,chr17	-,-,-,+,+	POLDIP2,SEBOX,VTN,TMEM199,SARM1	-9527,-1865,3026,-9494,4589
chr10:102293184-102294089	chr10	+	102293399	102294047	True	NM_017902,NM_005004	chr10,chr10	+,-	HIF1AN,NDUFB8	1593,-3763
chr2:20866536-20866768	chr2	+	20866616	20866796	True	NM_022460,NM_182828	chr2,chr2	-,+	HS1BP3,GDF7	-15752,-243
chr1:57325894-57326506	chr1	+	57325923	57326472	True	NM_000562,NM_001004303	chr1,chr1	+,-	C8A,C1orf168	-5531,-40554
chr17:7608937-7609202	chr17	+	7609000	7609246	True	NM_001126114,NM_001406	chr17,chr17	-,+	TP53,EFNB3	-18137,-531
chr4:17614883-17615116	chr4	+	17615060	17615126	True	NM_025205,NM_000320	chr4,chr4	+,-	MED28,QDPR	1146,-101203
chr1:22980271-22980570	chr1	+	22980290	22980420	True	NM_000491,NR_036214	chr1,chr1	+,-	C1QB,MIR4253	-659,209349
chr2:96014011-96015029	chr2	+	96014028	96014823	True	NM_001164464,NM_001034914	chr2,chr2	-,+	TRIM43B,KCNIP3	135707,-1311
chr4:164414651-164414997	chr4	+	164414652	164415012	True	NM_032136,NM_018352	chr4,chr4	-,+	TKTL2,C4orf43	-19605,660
chr5:134209210-134210062	chr5	+	134209248	134209926	True	NM_002653,NM_024715	chr5,chr5	-,+	PITX1,TXNDC15	160088,-23
chr16:14160423-14162225	chr16	+	14160455	14162265	True	NM_014048,NM_001134477	chr16,chr16	+,-	MKL2,PARN	2930,561905
chr16:28502950-28503189	chr16	+	28503000	28503216	True	NM_001042432,NM_018690,NM_000086	chr16,chr16,chr16	-,+,-	CLN3,APOBR,CLN3	457,2776,237
chr16:81347187-81347426	chr16	+	81347256	81347448	True	NM_001076780,NM_022041	chr16,chr16	-,+	PKD1L2,GAN	-93281,1122
chr8:117949397-117950489	chr8	+	117949894	117950468	True	NM_006265,NM_001025357	chr8,chr8	-,+	RAD21,C8orf85	-62789,-5
chr12:91395389-91396003	chr12	+	91395390	91396040	True	NM_004950,NR_028138	chr12,chr12	-,+	EPYC,LOC338758	2816,-1292710
chr1:207133812-207135638	chr1	+	207133996	207135588	True	NM_001122979,NM_006850,NM_032029,NM_001170631	chr1,chr1,chr1,chr1	-,+,-,-	FCAMR,IL24,FCAMR,FCAMR	8432,-63259,8432,8432
chr12:57882889-57884092	chr12	+	57882906	57884078	True	NM_032496,NM_004990,NM_001080157	chr12,chr12,chr12	-,+,-	ARHGAP9,MARS,ARHGAP9	-9273,-1221,-9482
chr2:23646186-23646617	chr2	+	23646311	23646455	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	503529,-38064
chr9:71627997-71628632	chr9	+	71628079	71628679	True	NM_000144,NM_002732	chr9,chr9	+,-	FXN,PRKACG	21799,410
chr1:152010380-152011638	chr1	+	152010479	152011341	True	NR_024237,NM_005620	chr1,chr1	+,-	LOC100132111,S100A11	-199586,-968
chr12:42635844-42637045	chr12	+	42636106	42636844	True	NM_001190977,NM_005748,NM_001190980,NR_034000,NM_001190979,NM_201438	chr12,chr12,chr12,chr12,chr12,chr12	-,-,-,-,-,+	YAF2,YAF2,YAF2,YAF2,YAF2,PPHLN1	-4017,-3952,-3955,-3955,-3955,83102
chr16:31230740-31230953	chr16	+	31230750	31230926	True	NM_001008274,NM_152901	chr16,chr16	+,-	TRIM72,PYDC1	-5459,-2355
chr17:73399914-73401077	chr17	+	73400305	73400950	True	NR_037449,NM_002086,NM_203506	chr17,chr17,chr17	+,-,-	MIR3678,GRB2,GRB2	1199,889,890
chr7:2351494-2352623	chr7	+	2351618	2352448	True	NM_001037283,NM_013321	chr7,chr7	+,-	EIF3B,SNX8	42025,1701
chr19:14775171-14775921	chr19	+	14775215	14775808	True	NM_032433,NM_032571	chr19,chr19	+,-	ZNF333,EMR3	25061,9981
chr19:49120075-49120575	chr19	+	49120260	49120620	True	NM_001204159,NM_001204158,NM_001204160,NM_000979,NM_017708,NM_020126	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,-,-,+	SPHK2,SPHK2,SPHK2,RPL18,FAM83E,SPHK2	2170,1927,7588,1863,-3566,1927
chr19:55835870-55836169	chr19	+	55836136	55836204	True	NM_001085488,NM_032701	chr19,chr19	-,+	TMEM150B,SUV420H2	554,15016
chrY:3549673-3550473	chrY	+	3549941	3550279	True	NM_003140,NM_139214	chrY,chrY	-,+	SRY,TGIF2LY	-894149,-102879
chrY:3549673-3550473	chrX	+	89366895	89367133	False	NM_138960,NM_004538	chrX,chrX	+,-	TGIF2LX,NAP1L3	-190016,3561599
chr16:85208099-85208403	chr16	+	85208282	85208346	True	NR_033984,NM_198491	chr16,chr16	+,-	LOC400548,FAM92B	-37577,-62168
chr20:42939928-42941799	chr20	+	42940032	42941354	True	NM_178491,NM_001080472	chr20,chr20	+,-	R3HDML,FITM2	24271,-143
chr12:85671494-85671801	chr12	+	85671535	85671796	True	NM_001100917,NM_006982	chr12,chr12	-,+	TSPAN19,ALX1	-241480,2239
chr2:87246483-87247270	chr2	+	87246638	87246890	True	NM_001032392,NM_002665,NM_001024457	chr2,chr2,chr2	-,-,+	PLGLB1,PLGLB2,RGPD1	2130,2134,-101959
chr2:87246483-87247270	chr2	-	88049880	88049938	False	NM_001032392,NM_001078170,NM_002665	chr2,chr2,chr2	+,-,+	PLGLB1,RGPD2,PLGLB2	-2329,75406,-2333
chr6:14960570-14961249	chr6	+	14960814	14961045	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	285481,702297
chr1:161200768-161201585	chr1	+	161200773	161201227	True	NM_001077470,NM_001077471,NM_001077472,NM_001077473,NM_001077474,NM_001077475,NM_001077476,NM_001077477,NM_001077478,NM_001077479,NM_001077469,NM_001077481,NM_001077480,NM_001077482,NM_032174,NM_005122,NM_001643	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,-,-,-,-,-,-,-,-,-,+,-,-	NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,TOMM40L,NR1I3,APOA2	6823,6823,6823,6823,6823,6823,6823,6823,6823,6823,6823,6823,6823,6823,-4991,6823,-7355
chr4:99912008-99913650	chr4	+	99912098	99913052	True	NR_037455,NM_015143,NM_001968	chr4,chr4,chr4	+,+,-	MIR3684,METAP1,EIF4E	5485,3735,-60312
chr11:114277674-114278369	chr11	+	114277694	114278406	True	NM_016090,NM_019021	chr11,chr11	+,-	RBM7,C11orf71	-6369,-6555
chrY:8655313-8655577	chrY	+	8655354	8655580	True	NR_001548,NR_001549	chrY,chrY	-,+	TTTY11,TTTY19	29893,-82896
chr5:135692687-135692895	chr5	+	135692687	135692937	True	NM_020389,NM_001167577,NM_001167576,NM_001001419	chr5,chr5,chr5,chr5	-,-,-,+	TRPC7,TRPC7,TRPC7,SMAD5	8277,8277,8277,-224202
chr7:141487154-141488902	chr7	+	141487216	141488931	True	NR_015392,NM_018980,NM_016944	chr7,chr7,chr7	-,+,+	FLJ40852,TAS2R5,TAS2R4	-49186,1085,-8979
chr4:188912904-188914035	chr4	+	188913562	188914079	True	NM_173553,NM_174900	chr4,chr4	-,+	TRIML2,ZFP42	112379,2845
chr11:74203503-74203804	chr11	+	74203511	74203655	True	NM_006591,NM_001144869	chr11,chr11	+,-	POLD3,LIPT2	99973,1162
chr17:30411506-30412241	chr19	-	14358618	14358971	False	NM_014921,NM_001025160	chr19,chr19	-,+	LPHN1,CD97	-41621,133241
chr17:30411506-30412241	chr17	+	30411844	30412236	True	NR_033412,NR_002222	chr17,chr17	+,-	SH3GL1P1,ARGFXP2	-44540,66404
chr17:30411506-30412241	chr17	+	28995729	28995827	False	NM_015986,NR_024187	chr17,chr17	-,+	CRLF3,SUZ12P	156001,40798
chr16:30910119-30910879	chr16	+	30910334	30910866	True	NM_001330,NM_004765,NR_031576,NM_001142544	chr16,chr16,chr16,chr16	+,-,+,+	CTF1,BCL7C,MIR762,CTF1	-2457,-4935,-5161,-2457
chr9:34567943-34568992	chr9	+	34567959	34568831	True	NR_024369,NM_001842	chr9,chr9	+,-	LOC415056,CNTFR	0,20941
chr2:47169442-47170203	chr2	+	47169643	47169943	True	NM_001171508,NM_020458,NM_001171511	chr2,chr2,chr2	-,+,-	MCFD2,TTC7A,MCFD2	-649,-1381,-649
chr16:5123806-5125116	chr16	+	5124005	5124818	True	NM_001098514,NM_019109,NM_152459	chr16,chr16,chr16	-,+,-	C16orf89,ALG1,C16orf89	-7894,-2250,-7894
chr3:38500044-38501102	chr3	+	38500152	38500784	True	NM_001106,NR_028389	chr3,chr3	+,-	ACVR2B,LOC100128640	-4413,-3841
chr11:1595183-1595738	chr11	+	1595224	1595754	True	NM_004420,NR_021489	chr11,chr11	-,+	DUSP8,LOC338651	-2074,-1304
chr1:12776901-12777241	chr1	+	12776945	12777285	True	NM_004753,NM_001103169,NM_001103170	chr1,chr1,chr1	-,+,+	DHRS3,AADACL3,AADACL3	-99125,-879,-879
chr11:68673521-68674200	chr11	+	68673681	68673977	True	NM_181515,NM_181514,NM_002180	chr11,chr11,chr11	-,-,+	MRPL21,MRPL21,IGHMBP2	-2378,-2378,-2413
chr4:95226590-95227691	chr4	+	95226686	95227711	True	NM_020159,NM_014485	chr4,chr4	+,-	SMARCAD1,HPGDS	-97728,36373
chr7:7221295-7221584	chr7	+	7221317	7221477	True	NM_020156,NR_034022	chr7,chr7	+,-	C1GALT1,LOC100131257	768,-84900
chr22:42487771-42488386	chr22	+	42487935	42488101	True	NM_002490,NR_034118	chr22,chr22	-,+	NDUFA6,LOC100132273	-1047,-1052
chr20:2450261-2450564	chr20	+	2450369	2450580	True	NR_003684,NM_003091,NM_080751,NM_198216	chr20,chr20,chr20,chr20	-,-,+,-	SNORD119,SNRPB,TMC2,SNRPB	-6676,969,66672,969
chr9:99999904-100000216	chr9	+	99999945	100000039	True	NR_036528,NR_036529,NM_199005,NR_036526,NR_036527	chr9,chr9,chr9,chr9,chr9	+,+,-,+,+	LOC57653,LOC57653,ZNF322B,LOC100499484,LOC57653	668,668,-38035,668,668
chr18:44529018-44530806	chr18	+	44529146	44530373	True	NM_001100817,NM_031303	chr18,chr18	-,+	TCEB3CL,KATNAL2	14049,-2413
chr16:79805060-79805521	chr16	+	79805111	79805539	True	NM_005360,NM_130897	chr16,chr16	-,+	MAF,DYNLRB2	-170489,769314
chr2:136289853-136291170	chr2	+	136289857	136290950	True	NM_015361,NM_032143	chr2,chr2	+,-	R3HDM1,ZRANB3	-829,-1051
chr15:40531097-40531341	chr15	+	40531123	40531345	True	NM_020168,NM_001039905	chr15,chr15	+,-	PAK6,C15orf56	689,13815
chr14:74889904-74890833	chr14	+	74890109	74890861	True	NM_001105579,NM_194279	chr14,chr14	-,+	TMEM90A,ISCA2	1996,69588
chr11:44332602-44333156	chr11	+	44332613	44333205	True	NM_021926,NM_000401	chr11,chr11	-,+	ALX4,EXT2	-897,-214917
chr3:179041741-179042900	chr3	+	179041785	179042718	True	NM_016331,NM_171828	chr3,chr3	+,-	ZNF639,KCNMB3	-285,-56947
chr17:48352750-48353031	chr17	+	48352755	48353073	True	NM_153229,NM_001168215,NM_000088	chr17,chr17,chr17	+,+,-	TMEM92,TMEM92,COL1A1	-1018,-4039,-73755
chr17:79349958-79350201	chr17	+	79349962	79350148	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	23391,-45488
chr5:45696453-45697499	chr5	+	45696617	45697329	True	NM_021072,NM_016640	chr5,chr5	-,+	HCN1,MRPS30	-397,-887641
chr5:61707856-61708393	chr5	+	61708072	61708426	True	NM_014473,NM_016338,NM_001134779	chr5,chr5,chr5	-,+,+	DIMT1L,IPO11,IPO11	-8344,146,6284
chr8:95833745-95834686	chr8	+	95833774	95834324	True	NM_017864,NM_057749	chr8,chr8	+,-	INTS8,CCNE2	1209,73214
chr13:41574515-41575203	chr13	+	41574642	41575005	True	NM_007187,NM_001145353	chr13,chr13	+,-	WBP4,ELF1	60691,-18224
chr12:106976502-106976709	chr12	+	106976506	106976742	True	NM_006825,NM_213594	chr12,chr12	-,+	CKAP4,RFX4	-334793,290
chr1:156218490-156219478	chr1	+	156218814	156219376	True	NM_024897,NM_199173,NM_198406	chr1,chr1,chr1	-,+,-	PAQR6,BGLAP,PAQR6	-971,-6914,-1022
chrX:41194657-41194882	chrX	+	41194713	41194926	True	NM_001193417,NM_001193416,NM_001356,NR_027761	chrX,chrX,chrX,chrX	+,+,+,-	DDX3X,DDX3X,DDX3X,LOC100132831	-2114,-2114,-2114,-502264
chr16:30074736-30075337	chr16	+	30074812	30075172	True	NM_004608,NM_184041,NM_001127617,NM_184043	chr16,chr16,chr16,chr16	-,+,+,+	TBX6,ALDOA,ALDOA,ALDOA	28083,1871,800,427
chr1:48926409-48927974	chr1	+	48926592	48926772	True	NM_001135181,NM_019073	chr1,chr1	+,-	SLC5A9,SPATA6	-238293,11164
chr5:180372828-180374131	chr5	+	180372842	180374159	True	NM_001159710,NM_152283	chr5,chr5	+,-	BTNL8,ZFP62	-36337,-84556
chr10:124791788-124792264	chr10	+	124791788	124791993	True	NM_001609,NM_022466	chr10,chr10	+,-	ACADSB,IKZF5	-23413,-23477
chr17:7623166-7623657	chr17	+	7623438	7623698	True	NM_001126114,NM_020877	chr17,chr17	-,+	TP53,DNAH2	-32575,-450
chr15:49767081-49767337	chr15	+	49767267	49767394	True	NM_152647,NM_002009	chr15,chr15	-,+	C15orf33,FGF7	145783,-51950
chr2:173961359-173962006	chr2	+	173961384	173961802	True	NR_033882,NM_016653	chr2,chr2	-,+	LOC339751,ZAK	185012,-20882
chr18:21607178-21607682	chr18	+	21607246	21607515	True	NM_001135993,NM_018030	chr18,chr18	+,-	TTC39C,OSBPL1A	-12921,244744
chr16:30074183-30074700	chr16	+	30074524	30074657	True	NM_004608,NM_184041,NM_001127617,NM_184043	chr16,chr16,chr16,chr16	-,+,+,+	TBX6,ALDOA,ALDOA,ALDOA	28605,2386,1315,942
chr10:108892130-108893211	chr10	+	108892240	108893095	True	NM_001013031,NM_014978	chr10,chr10	-,+	SORCS1,SORCS3	31256,-2491432
chr1:25557590-25558573	chr1	+	25557836	25558600	True	NM_001127691,NM_207170,NM_015484	chr1,chr1,chr1	+,-,-	RHD,SYF2,SYF2	40380,463,463
chrX:79830524-79830770	chrX	+	79830523	79830740	True	NM_152630,NM_153252	chrX,chrX	+,-	FAM46D,BRWD3	-154628,234550
chr15:83466416-83468055	chr15	+	83466684	83468053	True	NM_001007122,NM_001080435	chr15,chr15	-,+	FSD2,WHAMM	6803,9919
chr7:144532092-144532380	chr7	+	144532124	144532396	True	NM_005435,NM_022445,NM_001042482	chr7,chr7,chr7	+,-,-	ARHGEF5,TPK1,TPK1	-479686,800,800
chr17:73717464-73717682	chr17	+	73717638	73717698	True	NM_000154,NM_000213,NM_001005619,NM_001005731	chr17,chr17,chr17,chr17	-,+,+,+	GALK1,ITGB4,ITGB4,ITGB4	43632,-173,3077,-173
chr20:31786030-31786707	chr20	+	31786150	31786566	True	NM_080675,NR_026760	chr20,chr20	-,+	SUN5,BASE	-193911,-4790
chr13:45991305-45991675	chr13	+	45991517	45991693	True	NM_001204476,NM_001010875	chr13,chr13	+,-	COG3,SLC25A30	47336,875
chr12:133533286-133533610	chr12	+	133533297	133533501	True	NM_183238,NM_019591,NM_001164715	chr12,chr12,chr12	-,+,-	ZNF605,ZNF26,ZNF605	-429,29554,-405
chr19:54928043-54928268	chr19	+	54928203	54928267	True	NM_001201461,NM_198988,NM_020659,NM_001005367	chr19,chr19,chr19,chr19	+,-,+,+	TTYH1,LENG9,TTYH1,TTYH1	-1649,46677,-1649,-1649
chr16:48174675-48175115	chr16	+	48174718	48175053	True	NM_033226,NM_031490	chr16,chr16	-,+	ABCC12,LONP2	5679,103157
chr20:44654004-44654217	chr20	+	44654009	44654263	True	NM_001134771,NM_022095,NM_020708	chr20,chr20,chr20	+,-,+	SLC12A5,ZNF335,SLC12A5	-3731,-53176,3557
chr5:35991392-35991977	chr5	+	35991451	35992011	True	NM_002185,NM_001171873,NM_152404	chr5,chr5,chr5	+,-,-	IL7R,UGT3A1,UGT3A1	-134511,9169,4
chr17:72865453-72866359	chr17	+	72865705	72866353	True	NM_000835,NM_178160,NM_004110,NM_024417	chr17,chr17,chr17,chr17	-,+,-,-	GRIN2C,OTOP2,FDXR,FDXR	-9698,54016,2853,2853
chr2:20500203-20500828	chr2	+	20500204	20500730	True	NM_015317,NM_004040	chr2,chr2	-,+	PUM2,RHOB	26476,146104
chr6:131383240-131383738	chr6	+	131383277	131383651	True	NM_001431,NM_016377,NM_001199388,NM_001135554,NM_001135555	chr6,chr6,chr6,chr6,chr6	-,+,-,-,-	EPB41L2,AKAP7,EPB41L2,EPB41L2,EPB41L2	861,82809,815,861,815
chr1:111490687-111490905	chr1	+	111490737	111490923	True	NM_000560,NM_001006945	chr1,chr1	+,-	CD53,C1orf103	-75079,15693
chr2:237417199-237417853	chr2	+	237417206	237417653	True	NM_020311,NM_024726	chr2,chr2	+,-	CXCR7,IQCA1	60726,-1114
chr1:1845954-1846960	chr1	+	1845981	1846785	True	NM_138705,NM_178545	chr1,chr1	+,-	CALML6,TMEM52	-90,4005
chr3:38316608-38316963	chr3	+	38316625	38316961	True	NM_004256,NR_024024	chr3,chr3	+,-	SLC22A13,ACAA1	-9378,-137892
chr1:949231-949559	chr1	+	949363	949503	True	NM_005101,NM_001142467,NM_198576	chr1,chr1,chr1	+,-,+	ISG15,HES4,AGRN	-567,-13811,5999
chr17:27947975-27949197	chr17	+	27948124	27949067	True	NM_032854,NM_152345	chr17,chr17	-,+	CORO6,ANKRD13B	47,-27649
chr2:148776878-148778047	chr2	+	148777573	148777995	True	NM_001190881,NM_001190882,NM_001190879,NM_018328,NM_181741,NM_181742,NM_002552	chr2,chr2,chr2,chr2,chr2,chr2,chr2	-,-,-,+,-,-,-	ORC4,ORC4,ORC4,MBD5,ORC4,ORC4,ORC4	385,361,371,584,518,1228,384
chr18:33880537-33881862	chr18	+	33880558	33881898	True	NM_001099406,NM_025135	chr18,chr18	-,+	SLC39A6,FHOD3	-171201,-2907
chr1:229627497-229627907	chr1	+	229627737	229627858	True	NM_018230,NM_014777	chr1,chr1	-,+	NUP133,URB2	16285,134122
chr4:86951711-86953574	chr4	+	86951883	86953609	True	NM_031305,NM_138981	chr4,chr4	+,-	ARHGAP24,MAPK10	-100515,75247
chr6:8104645-8105682	chr6	+	8104883	8105634	True	NM_001135650,NR_027712,NR_037618,NM_004280	chr6,chr6,chr6,chr6	-,+,-,-	EEF1E1,PIP5K1P1,EEF1E1-MUTED,EEF1E1	-2055,-118604,-2055,-2055
chr20:5295257-5296401	chr20	+	5295336	5296416	True	NM_144773,NR_029405	chr20,chr20	-,+	PROKR2,LOC643406	-321,155425
chr11:89538113-89538721	chr11	+	89538260	89538769	True	NM_020358,NR_028346	chr11,chr11	-,+	TRIM49,TRIM53	3024,36395
chr11:89538113-89538721	chr11	-	89767248	89767650	False	NM_001195234,NR_028346	chr11,chr11	+,-	TRIM49L2,TRIM53	-3025,-31572
chr2:225608059-225609420	chr2	+	225608697	225609236	True	NM_003590,NM_020864	chr2,chr2	-,+	CUL3,KIAA1486	-158587,656365
chr9:93593160-93593557	chr9	+	93593200	93593528	True	NM_017594,NM_001174167	chr9,chr9	-,+	DIRAS2,SYK	-188092,-3546
chr14:68161636-68162133	chr14	+	68161838	68162068	True	NM_016026,NM_152443	chr14,chr14	-,+	RDH11,RDH12	492,6534
chr20:42548335-42549021	chr20	+	42548581	42549029	True	NM_176791,NM_032883,NM_001098796,NM_001098797	chr20,chr20,chr20,chr20	-,+,+,+	GTSF1L,TOX2,TOX2,TOX2	-192939,-3851,-3851,-5141
chr11:9111553-9112172	chr11	+	9111648	9111896	True	NM_020974,NR_027713,NM_001170690	chr11,chr11,chr11	-,+,-	SCUBE2,KRT8P41,SCUBE2	1304,4013,1304
chr19:38794163-38794463	chr19	+	38794236	38794398	True	NM_033557,NM_033520	chr19,chr19	-,+	YIF1B,C19orf33	6161,405
chr3:179755122-179756008	chr3	+	179755189	179756043	True	NM_003940,NM_016559	chr3,chr3	+,-	USP13,PEX5L	-384307,-672
chr2:114645686-114647513	chr2	+	114645709	114647218	True	NM_005721,NR_034130	chr2,chr2	+,-	ACTR3,LOC100499194	318,90393
chr7:5462378-5462722	chr7	+	5462408	5462686	True	NM_001080495,NM_153247	chr7,chr7	-,+	TNRC18,SLC29A4	541,-139898
chr3:138328880-138329515	chr3	+	138328884	138329278	True	NM_018147,NM_001033030,NM_001033032,NM_024491,NM_001033031	chr3,chr3,chr3,chr3,chr3	+,+,+,-,+	FAIM,FAIM,FAIM,CEP70,FAIM	-1016,-1393,-1393,-15755,-1393
chr3:31573448-31573863	chr3	+	31573606	31573830	True	NM_178862,NM_001174060	chr3,chr3	+,-	STT3B,OSBPL10	660,449562
chr4:46128328-46130106	chr4	+	46128438	46129984	True	NM_173536,NM_000812	chr4,chr4	-,+	GABRG1,GABRB1	-2356,903310
chr18:70210962-70211197	chr18	+	70211040	70211246	True	NM_014177,NM_182511	chr18,chr18	+,-	C18orf55,CBLN2	1604499,527
chr1:13455724-13456922	chr1	+	13455784	13456828	True	NM_001099854,NM_001024661,NM_001010890	chr1,chr1,chr1	-,-,+	PRAMEF14,PRAMEF13,PRAMEF9	-3128,-3128,-34671
chr1:13455724-13456922	chr1	+	13676620	13677664	False	NM_001099854,NM_001010890	chr1,chr1	-,+	PRAMEF14,PRAMEF9	-3109,-34710
chrX:37919302-37921266	chrX	+	37919446	37921123	True	NM_001163334,NM_001170750	chrX,chrX	+,-	SYTL5,SRPX	-26710,159104
chr1:148558888-148559706	chr1	+	148558986	148559498	True	NM_001164262,NM_173638,NM_001170755	chr1,chr1,chr1	-,+,+	PPIAL4F,NBPF15,NBPF15	-356450,1348,-858
chr1:148558888-148559706	chr1	+	144596654	144597162	False	NM_001037675,NR_003242	chr1,chr1	+,-	NBPF9,C1orf152	17796,15618
chr1:221050774-221051905	chr1	+	221050875	221051775	True	NM_021958,NR_024236	chr1,chr1	+,-	HLX,LOC400804	967,457913
chr16:68275301-68275957	chr16	+	68275317	68275534	True	NM_024939,NM_012320	chr16,chr16	-,+	ESRP2,PLA2G15	-5181,3712
chr14:51022158-51022760	chr14	+	51022308	51022782	True	NM_181598,NM_015915,NM_198794	chr14,chr14,chr14	+,+,-	ATL1,ATL1,MAP4K5	3960,3960,-22932
chr19:33168072-33168331	chr19	+	33168078	33168348	True	NM_207391,NM_032139	chr19,chr19	+,-	RGS9BP,ANKRD27	-1816,-1976
chr1:197158399-197160309	chr1	+	197158692	197160101	True	NM_001193640,NM_194314	chr1,chr1	+,-	CRB1,ZBTB41	77232,9634
chr2:17719373-17720154	chr2	+	17719552	17720010	True	NM_003385,NM_001099218	chr2,chr2	+,-	VSNL1,RAD51AP2	1796,-19846
chr14:96724120-96725016	chr14	+	96724542	96724916	True	NM_018036,NM_000710	chr14,chr14	-,+	ATG2B,BDKRB1	104819,-2042
chr16:48767507-48769392	chr16	+	48767561	48768970	True	NM_153029,NM_031490	chr16,chr16	-,+	N4BP1,LONP2	-123441,-489401
chr16:33728428-33729002	chr16	+	33728518	33729002	True	NR_033866,NM_001205265	chr16,chr16	-,+	LOC390705,TP53TG3B	-429816,-466449
chr16:33728428-33729002	chr16	-	31995061	31995143	False	NR_002827,NM_003414	chr16,chr16	-,+	HERC2P4,ZNF267	168781,-110033
chr16:33728428-33729002	chr16	-	32938613	32939097	False	NR_003083,NM_016212	chr16,chr16	-,+	SLC6A10P,TP53TG3	-42150,265882
chr8:37553820-37554081	chr8	+	37553934	37553998	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	-684,51616
chr16:1304300-1304581	chr16	+	1304346	1304562	True	NM_024164,NM_012217	chr16,chr16	-,+	TPSB2,TPSD1	-24161,1710
chr16:1304300-1304581	chr16	-	1281856	1282072	False	NM_012467,NM_024164,NM_003294	chr16,chr16,chr16	-,-,+	TPSG1,TPSB2,TPSAB1	-6602,-1671,8605
chr16:1304300-1304581	chr16	+	1289312	1289528	False	NM_024164,NM_003294	chr16,chr16	-,+	TPSB2,TPSAB1	-9127,1149
chr13:78550051-78551596	chr13	+	78550220	78551477	True	NM_000115,NM_144595	chr13,chr13	-,+	EDNRB,SLAIN1	-556,-234976
chr15:52470395-52471747	chr15	+	52470612	52471416	True	NM_006578,NM_002748	chr15,chr15	-,+	GNB5,MAPK6	796,-159260
chr1:154534037-154535650	chr1	+	154534103	154535623	True	NM_000748,NM_017582	chr1,chr1	+,-	CHRNB2,UBE2Q1	4633,-2983
chr16:88774377-88774580	chr16	+	88774513	88774603	True	NM_001171816,NM_001171815,NM_001012759,NM_178841,NM_001012762	chr16,chr16,chr16,chr16,chr16	-,-,+,-,+	RNF166,RNF166,CTU2,RNF166,CTU2	-4488,-1713,-1673,-1684,-1673
chr16:12897962-12898968	chr16	+	12897998	12898669	True	NM_001145205,NM_018340,NM_001099455	chr16,chr16,chr16	+,-,-	SHISA9,CPPED1,CPPED1	96807,-254,-254
chrX:43514945-43515375	chrX	+	43514944	43515350	True	NM_000898,NM_000240	chrX,chrX	-,+	MAOB,MAOA	226421,58
chr20:18546184-18547415	chr20	+	18546344	18547441	True	NM_006606,NR_015432	chr20,chr20	-,+	RBBP9,LOC388789	-68457,631
chr7:43966115-43966356	chr7	+	43966124	43966344	True	NM_001077664,NM_015983	chr7,chr7	-,+	URGCP,UBE2D4	-128,-140
chr22:31002531-31002878	chr22	+	31002564	31002915	True	NR_036550,NM_000355,NM_001184726	chr22,chr22,chr22	-,+,+	PES1,TCN2,TCN2	135,154,154
chr17:40072922-40073250	chr17	+	40072927	40073113	True	NM_031421,NM_198830,NM_001096	chr17,chr17,chr17	+,-,-	TTC25,ACLY,ACLY	13774,2209,2209
chr16:53764565-53765567	chr16	+	53764696	53765461	True	NM_001080432,NM_015272	chr16,chr16	+,-	FTO,RPGRIP1L	-26883,-26925
chr10:116397260-116399217	chr10	+	116397344	116399164	True	NM_020940,NM_002313	chr10,chr10	+,-	FAM160B1,ABLIM1	182338,18950
chr8:33454976-33456601	chr8	+	33454993	33456574	True	NM_032509,NM_024025	chr8,chr8	+,-	MAK16,DUSP26	-112359,915
chr17:36102765-36103073	chr17	+	36102910	36102987	True	NM_001165923,NM_032258,NM_000458	chr17,chr17,chr17	-,+,-	HNF1B,TBC1D3F,HNF1B	2160,180972,2160
chr13:111608481-111608957	chr13	+	111608748	111608899	True	NM_017664,NM_001113511	chr13,chr13	-,+	ANKRD10,ARHGEF7	-41332,158724
chr3:51994168-51994596	chr3	+	51994200	51994604	True	NM_033008,NM_033010,NM_080865,NM_001174100,NM_020418	chr3,chr3,chr3,chr3,chr3	-,-,+,-,-	PCBP4,PCBP4,GPR62,PCBP4,PCBP4	6928,2354,-4921,6928,6896
chr2:170220508-170220813	chr2	+	170220510	170220779	True	NM_152384,NM_004525	chr2,chr2	+,-	BBS5,LRP2	115226,-1388
chr5:149319988-149320354	chr5	+	149319993	149320403	True	NM_000440,NM_000112	chr5,chr5	-,+	PDE6A,SLC26A2	4003,19896
chr9:94123135-94123827	chr9	+	94123140	94123686	True	NM_001698,NR_037472	chr9,chr9	-,+	AUH,MIR3910-1	570,274846
chr22:32337259-32338188	chr22	+	32337997	32338203	True	NM_015372,NM_003405	chr22,chr22	-,+	C22orf24,YWHAH	3183,2275
chr16:3707037-3708596	chr16	+	3707050	3708243	True	NM_005223,NM_032444	chr16,chr16	+,-	DNASE1,SLX4	-4161,-45465
chr10:126636907-126638457	chr10	+	126637162	126638470	True	NM_022802,NM_017580	chr10,chr10	-,+	CTBP2,ZRANB1	78033,-6529
chr16:85335649-85335877	chr16	+	85335697	85335853	True	NR_033984,NM_198491	chr16,chr16	+,-	LOC400548,FAM92B	-164992,-189583
chr17:71162914-71164894	chr17	+	71162944	71164789	True	NM_001098832,NM_001050	chr17,chr17	-,+	FAM104A,SSTR2	63794,-1835
chr2:26700390-26702187	chr2	+	26700567	26702177	True	NM_194322,NM_194323,NM_004802,NM_145038	chr2,chr2,chr2,chr2	-,-,-,+	OTOF,OTOF,OTOF,CCDC164	-29,-29,-29,-75834
chr22:39018803-39019314	chr22	+	39018925	39019253	True	NM_001002880,NM_001013647	chr22,chr22	+,-	CBY1,LOC646851	33404,33431
chr10:115406322-115406776	chr10	+	115406529	115406735	True	NM_006175,NM_033340	chr10,chr10	-,+	NRAP,CASP7	17120,32199
chr1:205361161-205362091	chr1	+	205361279	205362033	True	NM_002596,NM_001001552	chr1,chr1	+,-	CDK18,LEMD1	111650,29240
chrX:37431046-37431331	chrX	+	37431111	37431377	True	NM_001170331,NM_006520,NM_198511	chrX,chrX,chrX	+,-,+	LANCL3,DYNLT3,LANCL3	-340,275562,-340
chrX:37431046-37431331	chrX	-	37003914	37004178	False	NM_006520,NM_001013736	chrX,chrX	-,+	DYNLT3,FAM47C	702761,22253
chr3:157157630-157159490	chr3	+	157158176	157159013	True	NM_002852,NM_001167917	chr3,chr3	+,-	PTX3,VEPH1	-3656,54332
chr19:39685616-39686435	chr19	+	39685677	39686257	True	NM_001080468,NM_001001414	chr19,chr19	-,+	SYCN,NCCRP1	8699,1346
chr2:114645240-114645686	chr2	+	114645273	114645703	True	NM_005721,NR_034130	chr2,chr2	+,-	ACTR3,LOC100499194	1833,91908
chr2:106811736-106812813	chr2	+	106811747	106812779	True	NM_025076,NM_032411	chr2,chr2	-,+	UXS1,C2orf40	-952,-129685
chr1:117116652-117117245	chr1	+	117116676	117117284	True	NM_001779,NM_001144822,NR_031564,NR_026665	chr1,chr1,chr1,chr1	-,-,+,-	CD58,CD58,MIR320B1,CD58	-2961,-2961,97086,-2961
chr18:18823388-18824746	chr18	+	18823506	18824705	True	NM_005406,NM_001142966	chr18,chr18	-,+	ROCK1,GREB1L	-131694,-1356
chr10:70662397-70663007	chr10	+	70662507	70662895	True	NM_024045,NM_152707	chr10,chr10	+,-	DDX50,SLC25A16	-1524,-375227
chr1:236307632-236307909	chr1	+	236307744	236307956	True	NM_002508,NM_003272	chr1,chr1	-,+	NID1,GPR137B	-79263,-1964
chr18:25757013-25757348	chr18	+	25757056	25757237	True	NR_026908,NM_001792	chr18,chr18	+,-	C18orf16,CDH2	-1311835,258
chr1:249200954-249201231	chr1	+	249200978	249201110	True	NM_001193328,NM_001017434	chr1,chr1	-,+	ZNF692,PGBD2	-47663,-587
chr9:86429808-86431609	chr9	+	86430115	86431658	True	NM_025211,NM_001135953,NM_024945	chr9,chr9,chr9	-,-,+	GKAP1,GKAP1,RMI1	1151,1151,163978
chr9:36257654-36258176	chr9	+	36257848	36258152	True	NM_001190383,NM_007096,NM_001190384,NM_005476	chr9,chr9,chr9,chr9	-,+,-,-	GNE,CLTA,GNE,GNE	394,-67053,394,394
chr17:47865041-47865878	chr17	+	47865082	47865869	True	NM_007067,NM_001199155,NM_001199156,NM_001199157,NM_001199158,NM_030802	chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,-	MYST2,MYST2,MYST2,MYST2,MYST2,FAM117A	111,111,111,111,111,-23564
chrX:45050240-45051006	chrX	+	45050338	45050854	True	NM_024689,NM_176819,NM_021140	chrX,chrX,chrX	-,-,+	CXorf36,CXorf36,KDM6A	9344,9344,-317979
chr2:99804004-99805254	chr2	+	99804310	99805095	True	NM_145212,NR_028356,NM_138798	chr2,chr2,chr2	+,+,-	MRPL30,MRPL30,MITD1	-6819,-6819,-6818
chr21:45627834-45628072	chr21	+	45627896	45628118	True	NM_198155,NM_015259	chr21,chr21	+,-	C21orf33,ICOSLG	-74453,32766
chr4:154389323-154390932	chr4	+	154389406	154390786	True	NR_001562,NM_015196,NM_001131007	chr4,chr4,chr4	-,+,+	ANXA2P1,KIAA0922,KIAA0922	-159443,-1972,-1972
chr17:57645315-57647260	chr17	+	57645632	57646406	True	NM_016077,NM_024612,NM_001166301	chr17,chr17,chr17	-,+,+	PTRH2,DHX40,DHX40	138500,-2808,-2808
chr19:54927571-54928004	chr19	+	54927609	54928007	True	NM_001201461,NM_198988,NM_020659,NM_001005367	chr19,chr19,chr19,chr19	+,-,+,+	TTYH1,LENG9,TTYH1,TTYH1	-1057,46937,-1057,-1057
chr18:3359980-3360343	chr18	+	3360091	3360330	True	NM_019856,NM_174886	chr18,chr18	-,+	MYOM1,TGIF1	-139985,51741
chr14:20660210-20661010	chr14	+	20660380	20661025	True	NM_001005503,NM_138376	chr14,chr14	+,-	OR11G2,TTC5	4469,113183
chr16:4000550-4001543	chr16	+	4000638	4001066	True	NM_005223,NM_004380	chr16,chr16	+,-	DNASE1,CREBBP	-297749,-70517
chr3:159706935-159707288	chr3	+	159706942	159707278	True	NM_000882,NM_001190242	chr3,chr3	+,-	IL12A,IFT80	-370,394326
chr6:142500728-142502361	chr6	+	142500871	142502041	True	NM_016485,NM_002511	chr6,chr6	+,-	VTA1,NMBR	-32528,-90935
chr11:78131675-78132462	chr11	+	78131865	78132439	True	NM_080491,NM_020798	chr11,chr11	-,+	GAB2,USP35	-2997,-232058
chr2:23641548-23642326	chr2	+	23641607	23642045	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	507939,-33360
chr5:149324149-149324761	chr5	+	149324159	149324698	True	NM_000440,NM_000112	chr5,chr5	-,+	PDE6A,SLC26A2	47,15601
chr2:96930293-96930656	chr2	+	96930332	96930702	True	NM_004804,NM_017849,NM_001193304	chr2,chr2,chr2	+,-,-	CIAO1,TMEM127,TMEM127	1181,1099,1099
chr21:38749580-38750688	chr21	+	38750066	38750386	True	NM_101395,NM_006052	chr21,chr21	+,-	DYRK1A,DSCR3	-10267,-110233
chr17:20656808-20657946	chr17	+	20656858	20657982	True	NM_001190790,NM_001004306	chr17,chr17	+,-	CDRT15L2,CCDC144NL	-173882,141522
chr12:52698566-52699085	chr12	+	52698628	52699076	True	NM_002284,NM_002281	chr12,chr12	+,-	KRT86,KRT81	-3030,-13329
chr1:21875538-21877535	chr1	+	21875581	21877548	True	NM_001177520,NM_001145658	chr1,chr1	+,-	ALPL,RAP1GAP	-39774,100850
chr17:30718631-30719005	chr17	+	30718654	30718820	True	NM_003457,NM_022344	chr17,chr17	+,-	ZNF207,C17orf75	-41561,-49465
chr10:75902963-75903945	chr10	+	75903439	75903611	True	NM_001202450,NM_012095,NM_207012,NM_006721	chr10,chr10,chr10,chr10	+,-,-,+	ADK,AP3M1,AP3M1,ADK	7331,7265,7265,7331
chr4:186066161-186066724	chr4	+	186066188	186066718	True	NM_020827,NM_001151	chr4,chr4	-,+	KIAA1430,SLC25A4	58514,-1822
chr10:134123551-134123798	chr10	+	134123666	134123834	True	NM_001143758,NM_173575	chr10,chr10	+,-	LRRC27,STK32C	21779,-2189
chr15:80189091-80189467	chr15	+	80189123	80189281	True	NM_006441,NM_001199758,NR_028330,NR_037654	chr15,chr15,chr15,chr15	-,-,+,-	MTHFS,MTHFS,C15orf37,MTHFS	160,396,25831,108
chr4:78002041-78003191	chr4	+	78002200	78003025	True	NM_004354,NM_006835	chr4,chr4	+,-	CCNG2,CCNI	75331,-5075
chr5:178978235-178978514	chr5	+	178978318	178978450	True	NM_005520,NM_025158,NM_001040451,NM_001040452	chr5,chr5,chr5,chr5	-,+,+,+	HNRNPH1,RUFY1,RUFY1,RUFY1	72322,-805,8281,8281
chr21:18887110-18887681	chr21	+	18887345	18887654	True	NM_001130914,NM_001338	chr21,chr21	-,+	BTG3,CXADR	97664,-2069
chr16:18493984-18494380	chr16	+	18494267	18494330	True	NR_036142,NR_003569,NR_036141,NR_036144	chr16,chr16,chr16,chr16	-,+,-,-	MIR3180-2,ABCC6P1,MIR3180-1,MIR3180-3	1845,88239,1849,1849
chr12:6675613-6676518	chr12	+	6675657	6676531	True	NM_002046,NM_001033714,NM_006170	chr12,chr12,chr12	+,-,-	GAPDH,NOP2,NOP2	-32051,999,999
chr20:37056558-37057802	chr20	+	37056797	37057717	True	NR_015366,NR_027241,NR_002911,NR_003239,NR_003017,NR_002910,NR_003018	chr20,chr20,chr20,chr20,chr20,chr20,chr20	-,-,-,+,-,-,-	LOC388796,LOC388796,SNORA71A,SNHG11,SNORA71C,SNORA71B,SNORA71D	6295,6351,-711,17579,780,-2819,4975
chr12:86215678-86216694	chr12	+	86215741	86216663	True	NM_006183,NM_005447	chr12,chr12	+,-	NTS,RASSF9	51409,13716
chr1:47693903-47694421	chr1	+	47693947	47694215	True	NM_001010969,NM_003189	chr1,chr1	+,-	CYP4A22,TAL1	-90891,1278
chr15:85296794-85297819	chr15	+	85297046	85297517	True	NM_014630,NM_014300	chr15,chr15	+,-	ZNF592,SEC11A	-5290,-37372
chr7:100303256-100303494	chr7	+	100303316	100303542	True	NM_005837,NM_022574	chr7,chr7	+,-	POP7,GIGYF1	133,-16446
chr4:77229344-77230663	chr4	+	77229534	77230690	True	NM_003943,NM_005506	chr4,chr4	+,-	STBD1,SCARB2	-1908,-94482
chr10:49813000-49813242	chr10	+	49812999	49813114	True	NM_020945,NM_021226	chr10,chr10	+,-	WDFY4,ARHGAP22	80403,75
chrX:102319198-102320378	chrX	+	102319326	102320299	True	NM_018476,NM_001031834	chrX,chrX	-,+	BEX1,RAB40AL	-158,-127177
chr3:169899343-169899544	chr3	+	169899453	169899525	True	NM_002740,NM_024947	chr3,chr3	+,-	PRKCI,PHC3	40694,62
chrX:53712181-53712954	chrX	+	53712289	53712991	True	NM_031407,NM_001031745	chrX,chrX	-,+	HUWE1,RIBC1	740,-262463
chr17:25602780-25604276	chr17	+	25602993	25604320	True	NM_015626,NM_000625	chr17,chr17	+,-	WSB1,NOS2	16785,523291
chr5:147551326-147552933	chr5	+	147551375	147552875	True	NM_001001325,NM_206966	chr5,chr5	+,-	SPINK14,C5orf46	-2139,-265274
chr19:7696299-7696740	chr19	+	7696352	7696708	True	NM_006949,NR_033242,NM_020196,NM_174895,NM_001127396,NM_001171155	chr19,chr19,chr19,chr19,chr19,chr19	+,+,-,-,+,+	STXBP2,LOC100131801,XAB2,PCP2,STXBP2,LOC100131801	5282,-1732,-1913,1912,5282,-1732
chr19:7696299-7696740	chr3	+	186314912	186314974	False	NM_001622,NM_001134415	chr3,chr3	+,-	AHSG,TBCCD1	15875,-26580
chr14:47123296-47124319	chr14	+	47123295	47124361	True	NM_020937,NM_080746	chr14,chr14	+,-	FANCM,RPL10L	-1518210,-2267
chr19:35646397-35646637	chr19	+	35646432	35646652	True	NM_001164605,NM_144779,NM_139284,NR_028406,NM_014164	chr19,chr19,chr19,chr19,chr19	+,+,-,+,+	FXYD5,FXYD5,LGI4,FXYD5,FXYD5	-638,-811,-20254,-811,-858
chr16:4528472-4529946	chr16	+	4528833	4529727	True	NM_002134,NM_001127206,NM_001127204,NM_020677	chr16,chr16,chr16,chr16	+,+,+,-	HMOX2,HMOX2,HMOX2,NMRAL1	-2544,-4166,-2544,-3937
chrX:53345752-53346189	chrX	+	53345845	53346235	True	NM_001111125,NM_144968	chrX,chrX	-,+	IQSEC2,RIBC1	4337,103603
chr12:121408099-121408772	chr12	+	121408217	121408597	True	NR_024345,NM_000545	chr12,chr12	-,+	NCRNA00262,HNF1A	1548,7951
chr16:14791433-14793308	chr16	+	14791601	14793111	True	NM_003561,NM_016561	chr16,chr16	-,+	PLA2G10,BFAR	-3075,-64984
chr16:14791433-14793308	chr16	+	14830719	14832229	False	NM_003561,NM_014287	chr16,chr16	-,+	PLA2G10,NOMO1	-42193,95413
chr1:36861538-36862292	chr1	+	36861921	36862299	True	NM_032881,NM_024676	chr1,chr1	-,+	LSM10,SH3D21	1244,-89264
chr17:60132461-60133074	chr17	+	60132769	60132920	True	NM_001144933,NM_005121	chr17,chr17	+,-	EFCAB3,MED13	314658,9784
chr13:109244647-109245743	chr13	+	109245131	109245676	True	NM_001098268,NM_015011	chr13,chr13	-,+	LIG4,MYO16	-374415,2823
chr20:62341596-62342798	chr20	+	62341876	62342716	True	NM_032527,NM_003224,NM_001195653,NM_001195654,NM_181485,NM_001083113,NM_001134758	chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,-,+,+,+,+,-	ZGPAT,ARFRP1,ZGPAT,ZGPAT,ZGPAT,ZGPAT,ARFRP1	-2551,-2521,-2551,-2551,-2551,-3137,-2521
chr11:6788495-6790026	chr11	+	6788636	6789734	True	NM_001004490,NM_001004489	chr11,chr11	-,+	OR2AG2,OR2AG1	504,16513
chr1:212585405-212585860	chr1	+	212585536	212585874	True	NM_018252,NM_001198862,NM_013349	chr1,chr1,chr1	-,-,+	TMEM206,TMEM206,NENF	2443,2419,20354
chr4:1713583-1713789	chr4	+	1713588	1713774	True	NM_006527,NM_138385,NM_006342,NM_001127266	chr4,chr4,chr4,chr4	-,-,+,-	SLBP,TMEM129,TACC3,TMEM129	306,9360,9491,9360
chr3:27674470-27674751	chr3	+	27674475	27674795	True	NM_005442,NM_182523	chr3,chr3	-,+	EOMES,CMC1	89040,608328
chr19:51766745-51768054	chr19	+	51767072	51768047	True	NM_173635,NM_001163922	chr19,chr19	+,-	C19orf75,VSIG10L	-6159,77381
chr7:111844199-111845068	chr7	+	111844215	111845074	True	NM_021994,NM_014705	chr7,chr7	+,-	ZNF277,DOCK4	1568,1439
chr3:152553733-152554014	chr3	+	152553800	152554036	True	NM_002563,NM_001123228	chr3,chr3	+,-	P2RY1,TMEM14E	-1115,-495021
chr10:118095569-118096756	chr10	+	118095901	118096615	True	NM_005264,NM_198515	chr10,chr10	-,+	GFRA1,C10orf96	-62775,-12017
chr14:39640359-39640795	chr14	+	39640367	39640596	True	NM_001079537,NM_177452,NM_002687	chr14,chr14,chr14	-,-,+	TRAPPC6B,TRAPPC6B,PNN	-733,-733,3790
chr5:178976863-178977324	chr5	+	178976950	178977364	True	NM_005520,NM_025158,NM_001040451,NM_001040452	chr5,chr5,chr5,chr5	-,+,+,+	HNRNPH1,RUFY1,RUFY1,RUFY1	73408,206,9367,9367
chr5:142150580-142150992	chr5	+	142150617	142151041	True	NM_015071,NM_001135608,NR_026696	chr5,chr5,chr5	+,+,-	ARHGAP26,ARHGAP26,FGF1	-376,-376,-72982
chr8:67343110-67343715	chr8	+	67343362	67343563	True	NM_001080416,NM_015169,NM_144650	chr8,chr8,chr8	-,+,+	MYBL1,RRS1,ADHFE1	181978,-2156,1154
chr12:5019845-5020115	chr12	+	5019879	5020043	True	NM_006422,NM_000217	chr12,chr12	-,+	AKAP3,KCNA1	-265536,-857
chr6:117996752-117997010	chr6	+	117996839	117996963	True	NM_020399,NM_138459	chr6,chr6	-,+	GOPC,NUS1	-73134,-273
chr6:117996752-117997010	chrX	-	47372682	47372876	False	NM_001654,NM_153380	chrX,chrX	+,-	ARAF,ZNF41	47639,-30337
chr11:6456979-6458916	chr11	+	6457065	6458907	True	NM_012192,NM_000613,NM_001007593	chr11,chr11,chr11	+,-,+	FXC1,HPX,SMPD1	43769,3397,-45472
chr6:7588765-7590367	chr6	+	7588862	7590397	True	NM_152551,NM_001170693	chr6,chr6	+,-	SNRNP48,CAGE1	34,-198920
chr16:15526590-15528112	chr16	+	15527384	15528098	True	NM_033201,NM_001184998	chr16,chr16	+,-	C16orf45,KIAA0430	226,208975
chr5:142064392-142065621	chr5	+	142064524	142065538	True	NM_001135608,NM_000800,NM_033136	chr5,chr5,chr5	+,-,-	ARHGAP26,FGF1,FGF1	84753,165,564
chrX:154842338-154842634	chrX	+	154842361	154842549	True	NM_018196,NM_005840	chrX,chrX	-,+	TMLHE,SPRY3	123,154901
chr1:156400792-156402655	chr1	+	156400872	156402563	True	NM_006365,NR_026549	chr1,chr1	-,+	C1orf61,RHBG	-1688,-61920
chr1:23811874-23812175	chr1	+	23811875	23812064	True	NR_033691,NM_001143778,NM_017707	chr1,chr1,chr1	+,-,-	C1orf213,ASAP3,ASAP3	-116228,-1125,-1125
chr20:5488010-5488906	chr20	+	5488392	5488949	True	NR_029405,NR_015406	chr20,chr20	+,-	LOC643406,LOC149837	-36602,-3150
chr19:44173886-44174458	chr19	+	44174000	44174144	True	NM_001005376,NM_001005377,NM_019612,NM_002659	chr19,chr19,chr19,chr19	-,-,+,-	PLAUR,PLAUR,IRGC,PLAUR	404,404,46069,404
chr6:109704053-109704296	chr6	+	109704071	109704285	True	NM_001142404,NM_001142402,NM_001142403,NM_001142401,NM_006016,NM_003080	chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,-,-,+	CD164,CD164,CD164,CD164,CD164,SMPD2	-309,-309,-309,-309,-309,57645
chr17:72866359-72867224	chr17	+	72866659	72867254	True	NM_178160,NM_004110,NM_024417	chr17,chr17,chr17	+,-,-	OTOP2,FDXR,FDXR	53115,1952,1952
chr9:5701481-5702469	chr9	+	5701694	5702200	True	NM_024896,NM_020829	chr9,chr9	-,+	ERMP1,KIAA1432	130939,-45175
chr11:85396627-85397014	chr11	+	85396727	85396999	True	NM_152723,NM_032273	chr11,chr11	-,+	CCDC89,TMEM126A	371,-37815
chr3:10350914-10351894	chr3	+	10351024	10351808	True	NM_001136232,NR_024146	chr3,chr3	-,+	SEC13,GHRLOS	10967,-23637
chr19:12883656-12884354	chr19	+	12883662	12883872	True	NM_002229,NM_013312,NM_001100176	chr19,chr19,chr19	+,-,-	JUNB,HOOK2,HOOK2	18437,2612,2612
chr7:83809555-83809926	chr7	+	83809560	83809681	True	NM_006080,NM_000840	chr7,chr7	-,+	SEMA3A,GRM3	14601,2463548
chr5:169761862-169763007	chr5	+	169761925	169762982	True	NR_026945,NM_005565	chr5,chr5	+,-	LOC257358,LCP2	-3550,-37103
chr6:150166188-150167793	chr6	+	150166231	150167767	True	NM_005389,NM_025217,NM_032832	chr6,chr6,chr6	+,+,-	PCMT1,ULBP2,LRP11	-95451,95368,17763
chr10:135089747-135090003	chr10	+	135089879	135090007	True	NM_001164490,NM_001109,NM_145806,NM_001164489	chr10,chr10,chr10,chr10	-,-,+,-	ADAM8,ADAM8,ZNF511,ADAM8	450,450,32415,450
chr18:44550082-44550383	chr18	+	44550103	44550353	True	NM_145653,NM_001100817,NM_031303	chr18,chr18,chr18	-,-,+	TCEB3C,TCEB3CL,KATNAL2	231,-5,-23367
chr18:44550082-44550383	chr18	+	44544176	44544426	False	NM_145653,NM_001100817,NM_031303	chr18,chr18,chr18	-,-,+	TCEB3C,TCEB3CL,KATNAL2	6158,-5,-17440
chr18:44550082-44550383	chr18	+	44556018	44556268	False	NM_145653,NM_001100817,NM_016427,NM_031303	chr18,chr18,chr18,chr18	-,-,-,+	TCEB3C,TCEB3CL,TCEB3B,KATNAL2	231,-5,5770,-29282
chr18:44550082-44550383	chr18	+	44561440	44561592	False	NM_145653,NM_001100817,NM_016427,NM_031303	chr18,chr18,chr18,chr18	-,-,-,+	TCEB3C,TCEB3CL,TCEB3B,KATNAL2	-4991,-5227,446,-34704
chr7:30055534-30056303	chr7	+	30055848	30055994	True	NM_017946,NM_001197026	chr7,chr7	-,+	FKBP14,PLEKHA8	10334,11982
chr5:87983379-87984941	chr5	+	87983386	87984656	True	NR_024383,NM_022650,NR_015436	chr5,chr5,chr5	-,+,-	LOC645323,RASA1,LOC645323	-9124,-1418678,-2766
chr8:143958490-143958898	chr8	+	143958554	143958866	True	NM_001026213,NM_002066,NM_000497	chr8,chr8,chr8	-,+,-	CYP11B1,GML,CYP11B1	2420,-42388,2420
chr6:38595358-38597319	chr6	+	38595580	38597297	True	NM_001099272,NM_001371	chr6,chr6	-,+	BTBD9,DNAH8	10689,93254
chr2:55282623-55283582	chr2	+	55283158	55283482	True	NM_153828,NM_207520,NM_001135592,NM_207521,NM_020532	chr2,chr2,chr2,chr2,chr2	-,-,+,-,-	RTN4,RTN4,RPS27A,RTN4,RTN4	-5424,-5424,175556,-6832,-5424
chr2:54193562-54195129	chr2	+	54193715	54195132	True	NM_014614,NM_138448	chr2,chr2	-,+	PSME4,ACYP2	2896,147277
chr1:15928012-15928581	chr1	+	15928091	15928397	True	NM_032341,NM_024758	chr1,chr1	+,-	DDI2,AGMAT	15555,-16486
chr10:123921540-123922588	chr10	+	123921660	123922386	True	NM_006997,NM_017615,NM_206860	chr10,chr10,chr10	+,-,+	TACC2,NSMCE4A,TACC2	718,-186917,718
chr22:48970163-48970914	chr22	+	48970230	48970888	True	NR_033377,NM_015381	chr22,chr22	-,+	FLJ46257,FAM19A5	-942912,1229
chrX:133595208-133596091	chrX	+	133595295	133595866	True	NM_000194,NR_030587	chrX,chrX	+,-	HPRT1,MIR450B	-1172,78477
chr3:82855981-82857024	chr3	+	82856001	82856968	True	NM_001167674,NM_000158	chr3,chr3	+,-	CADM2,GBE1	2151164,-1045051
chr1:1210845-1211405	chr1	+	1210858	1211420	True	NR_037668,NM_194458,NM_194315,NM_194457,NM_001130413,NM_058167	chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,-,+,-	SCNN1D,UBE2J2,UBE2J2,UBE2J2,SCNN1D,UBE2J2	-271,-1624,-1624,-1624,-271,-1624
chr1:183372362-183374075	chr1	+	183372661	183373975	True	NM_001174061,NM_015039	chr1,chr1	+,-	SMG7,NMNAT2	67530,13709
chr6:46604571-46604866	chr6	+	46604597	46604873	True	NM_016593,NM_001204051	chr6,chr6	-,+	CYP39A1,SLC25A27	15700,15778
chr13:45765226-45767132	chr13	+	45765588	45767158	True	NM_004128,NM_198404	chr13,chr13	+,-	GTF2F2,KCTD4	-71018,8067
chr11:73693357-73693835	chr11	+	73693655	73693883	True	NM_153614,NM_003355	chr11,chr11	+,-	DNAJB13,UCP2	-32342,56
chr14:60179359-60180673	chr14	+	60179878	60180611	True	NM_016475,NM_206857	chr14,chr14	+,-	JKAMP,RTN1	-228768,13871
chr1:27240667-27241177	chr1	+	27240708	27241156	True	NM_021969,NM_006600	chr1,chr1	-,+	NR0B2,NUDC	-141,7067
chr17:7213058-7214004	chr17	+	7213078	7214042	True	NM_001970,NM_001143761,NM_001143762,NM_001143760,NM_004489	chr17,chr17,chr17,chr17,chr17	+,+,+,+,-	EIF5A,EIF5A,EIF5A,EIF5A,GPS2	-2273,-1841,-1435,-2811,4666
chr20:10417296-10418665	chr20	+	10417301	10418494	True	NM_170784,NM_018848,NM_001009608	chr20,chr20,chr20	-,-,+	MKKS,MKKS,C20orf94	-2435,-4731,-1409
chr17:42909112-42909450	chr17	+	42909212	42909337	True	NM_016438,NM_001080383,NM_005497	chr17,chr17,chr17	+,-,-	HIGD1B,GJC1,GJC1	15941,-1033,-1605
chr12:56522009-56522314	chr12	+	56522065	56522317	True	NM_015292,NM_001130420,NM_001184796	chr12,chr12,chr12	+,-,+	ESYT1,SMARCC2,ESYT1	-130,61084,-130
chr17:37321333-37321557	chr17	+	37321337	37321441	True	NM_000981,NM_001143968	chr17,chr17	+,-	RPL19,ARL5C	35094,1023
chr17:80185956-80186185	chr17	+	80185994	80186136	True	NM_001042423,NM_001042422,NM_004207,NM_198082	chr17,chr17,chr17,chr17	+,+,+,-	SLC16A3,SLC16A3,SLC16A3,CCDC57	4007,156,752,-15305
chr8:33345233-33345739	chr8	+	33345233	33345442	True	NM_032664,NM_032509	chr8,chr8	-,+	FUT10,MAK16	-14569,-2603
chr2:203131607-203132407	chr2	+	203131610	203132421	True	NR_003058,NM_015934,NM_003352	chr2,chr2,chr2	+,+,-	SNORD70,NOP58,SUMO1	8732,-1146,-28288
chr22:25780245-25780657	chr22	+	25780441	25780611	True	NM_001135772,NR_033733	chr22,chr22	-,+	LRP5L,CRYBB2P1	-2897,63442
chr1:55180394-55180678	chr1	+	55180401	55180651	True	NM_004623,NM_152268	chr1,chr1	+,-	TTC4,PARS2	843,49625
chr2:215672108-215672452	chr2	+	215672158	215672508	True	NM_000465,NM_001080500	chr2,chr2	-,+	BARD1,VWC2L	1978,-395760
chr13:24732414-24732931	chr13	+	24732429	24732919	True	NM_153023,NR_031753,NM_001166271,NM_001007537	chr13,chr13,chr13,chr13	+,+,+,-	SPATA13,MIR2276,SPATA13,C1QTNF9B	1941,3635,1941,-261304
chr5:108090785-108091277	chr5	+	108090931	108091095	True	NM_005246,NM_001163315	chr5,chr5	+,-	FER,FBXL17	-7460,-373132
chr12:110436058-110436527	chr12	+	110436134	110436562	True	NM_057169,NM_014776,NM_033121,NM_057170,NM_001135213,NM_139201,NM_001135214	chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,-,+,-,-,-,-	GIT2,GIT2,ANKRD13A,GIT2,GIT2,GIT2,GIT2	-1940,-1940,672,-1940,-1940,-1940,-1940
chr16:4292198-4293895	chr16	+	4292407	4293939	True	NM_001098814,NM_032575	chr16,chr16	-,+	SRL,GLIS2	-326,88285
chr14:92575051-92575632	chr14	+	92575057	92575457	True	NM_001164776,NM_001164777,NR_028453,NR_028457,NR_028456,NR_028455,NR_028454,NM_001164778,NM_001164779,NR_028459,NR_028458,NR_028470,NM_017437,NR_031765,NM_001164781,NM_001164780,NM_001164782,NM_004993,NR_028468,NR_028469,NR_028466,NR_028467,NR_028464,NR_028465,NR_028462,NR_028463,NR_028460,NR_028461,NM_030660,NM_001127696,NM_001127697,NM_001164774	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	-,-,-,-,-,-,-,-,-,-,-,-,+,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-	ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,CPSF2,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3	-2092,-2092,-2092,-2092,-2092,-2092,-2092,-2092,-2092,-2092,-2092,-2092,12840,-2092,-2092,-2092,-2092,-2092,-2092,-2092,-2092,-2092,-2092,-2092,-2092,-2092,-2092,-2092,-2092,-2092,-2092,-2092
chr1:16561512-16562334	chr1	+	16561542	16562164	True	NM_001114600,NM_030907	chr1,chr1	+,-	C1orf144,RSG1	131418,1545
chr16:58328577-58329305	chr16	+	58328630	58329332	True	NM_014157,NM_001080492	chr16,chr16	+,-	CCDC113,PRSS54	-44842,11
chr7:100808529-100808750	chr7	+	100808607	100808683	True	NM_003378,NM_001283	chr7,chr7	-,+	VGF,AP1S1	219,-10972
chr1:247266858-247267275	chr1	+	247267031	247267116	True	NM_024804,NM_001142572,NM_207401,NM_173858	chr1,chr1,chr1,chr1	-,-,-,+	ZNF669,ZNF669,C1orf229,VN1R5	609,609,8654,152257
chr11:64646018-64646284	chr11	+	64646052	64646314	True	NM_006795,NM_006244	chr11,chr11	-,+	EHD1,PPP2R5B	-59,45828
chr14:96154211-96154926	chr14	+	96154301	96154962	True	NM_001098725,NM_004918	chr14,chr14	-,+	TCL1A,TCL1B	25624,-1599
chr9:140134160-140134516	chr9	+	140134246	140134310	True	NM_006088,NM_001177317,NM_001001710,NM_080877,NM_001177316	chr9,chr9,chr9,chr9,chr9	+,+,-,+,+	TUBB2C,SLC34A3,FAM166A,SLC34A3,SLC34A3	1400,-9091,7962,-8915,-9091
chr8:65494102-65494352	chr8	+	65494103	65494397	True	NM_152414,NR_015374	chr8,chr8	+,-	BHLHE22,LOC401463	-1359,-4283
chr20:23067190-23067689	chr20	+	23067272	23067614	True	NM_001052,NM_012072	chr20,chr20	+,-	SSTR4,CD93	-51268,-295
chr17:41735729-41736879	chr17	+	41736037	41736801	True	NM_001136483,NM_013999,NM_001040002,NM_004527	chr17,chr17,chr17,chr17	+,-,-,-	C17orf105,MEOX1,MEOX1,MEOX1	121001,2180,2511,2180
chr8:104388752-104390125	chr8	+	104388973	104389810	True	NM_138455,NM_030780	chr8,chr8	+,-	CTHRC1,SLC25A32	-5248,37717
chr18:55816643-55817751	chr18	+	55816760	55817450	True	NM_005603,NM_001144965,NM_001144971,NM_001144969,NM_001144968	chr18,chr18,chr18,chr18,chr18	-,+,+,+,+	ATP8B1,NEDD4L,NEDD4L,NEDD4L,NEDD4L	-346433,-246,-246,-246,-246
chr19:51014779-51015003	chr19	+	51014779	51015003	True	NM_138334,NM_001024656,NM_001114598,NM_206538	chr19,chr19,chr19,chr19	-,-,-,+	JOSD2,ASPDH,ASPDH,C19orf63	-434,2994,2189,-35094
chr1:228645106-228645315	chr1	+	228645135	228645361	True	NM_033445,NM_175055	chr1,chr1	-,+	HIST3H2A,HIST3H2BB	249,446
chrX:10124331-10124571	chrX	+	10124330	10124592	True	NM_001830,NM_000273	chrX,chrX	+,-	CLCN4,GPR143	392,-390325
chr14:51298058-51298368	chr14	+	51298150	51298372	True	NM_181533,NM_020921,NM_016350,NM_182946,NM_182944	chr14,chr14,chr14,chr14,chr14	+,-,-,-,-	ABHD12B,NIN,NIN,NIN,NIN	40505,-311,-311,-311,-311
chr1:1552868-1554473	chr1	+	1552875	1554097	True	NM_001170687,NM_080875,NM_001170689,NM_001170688,NM_001170686,NR_033183,NM_014188	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,+,-	MIB2,MIB2,MIB2,MIB2,MIB2,MIB2,SSU72	-2131,-2131,-1681,-2131,-2131,-2131,-42613
chr17:6683939-6684194	chr17	+	6684031	6684185	True	NM_053285,NM_153230	chr17,chr17	-,+	TEKT1,FBXO39	50925,-4531
chr9:130970497-130971246	chr9	+	130970640	130971270	True	NM_012127,NM_004408,NM_001005336,NM_001131015	chr9,chr9,chr9,chr9	-,+,+,-	CIZ1,DNM1,DNM1,CIZ1	-3978,-5028,-5028,-3978
chr2:228499326-228499891	chr2	+	228499348	228499488	True	NM_020161,NM_004504,NM_001162483	chr2,chr2,chr2	-,+,-	C2orf83,AGFG1,C2orf83	-1312,-162511,-1312
chr11:102325419-102325735	chr11	+	102325454	102325772	True	NM_001166,NM_052932	chr11,chr11	+,-	BIRC2,TMEM123	-107539,-1679
chr16:74639178-74640335	chr16	+	74639275	74640264	True	NM_002811,NM_001145667,NR_027265,NM_001145666,NR_027264,NM_012201	chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,-,-,-	PSMD7,GLG1,GLG1,GLG1,GLG1,GLG1	-308664,828,828,828,828,828
chr11:62492828-62493043	chr11	+	62492991	62493083	True	NM_001079559,NR_037946,NM_173810	chr11,chr11,chr11	-,-,+	HNRNPUL2,HNRNPUL2-BSCL2,TTC9C	1824,1823,2868
chr1:168696934-168698283	chr1	+	168697108	168698330	True	NR_024160,NM_001937	chr1,chr1	+,-	MGC4473,DPT	57848,162
chr12:12487498-12488433	chr12	+	12487548	12488138	True	NM_058169,NM_018050	chr12,chr12	+,-	LOH12CR1,MANSC1	21881,15081
chr9:130892332-130893836	chr9	+	130892898	130893821	True	NR_027811,NR_027812,NR_024425,NM_025072	chr9,chr9,chr9,chr9	-,-,+,-	PTGES2,PTGES2,LOC389791,PTGES2	-2186,-2186,-2141,-2424
chr17:47307542-47307785	chr17	+	47307598	47307772	True	NM_001143804,NM_178500,NR_034161	chr17,chr17,chr17	-,-,+	PHOSPHO1,PHOSPHO1,FLJ40194	406,406,17832
chr14:20099475-20101014	chr22	+	16367657	16367843	False	NR_001591,NM_001136213	chr22,chr22	+,-	psiTPTE22,POTEH	714957,-79720
chr14:20099475-20101014	chr14	+	20099993	20100917	True	NM_001145442,NM_172194	chr14,chr14	-,+	POTEM,OR4Q3	-79721,114669
chr14:20099475-20101014	chr14	-	19473501	19473687	False	NM_001145442,NM_001005356	chr14,chr14	-,+	POTEM,POTEG	546635,79677
chr1:109341329-109342550	chr1	+	109341330	109342550	True	NM_152763,NM_007269	chr1,chr1	-,+	AKNAD1,STXBP3	57217,-52104
chr1:6421427-6422345	chr1	+	6421445	6422135	True	NM_031475,NM_181865,NM_181866	chr1,chr1,chr1	+,-,-	ESPN,ACOT7,ACOT7	62712,-681,-2441
chr1:247334186-247334671	chr1	+	247334287	247334693	True	NM_173858,NM_003431	chr1,chr1	+,-	VN1R5,ZNF124	84680,675
chr1:247334186-247334671	chr1	-	247290352	247290758	False	NM_173858,NM_207401	chr1,chr1	+,-	VN1R5,C1orf229	128615,-14633
chr12:101674227-101674943	chr12	+	101674336	101674995	True	NM_014503,NM_145913	chr12,chr12	+,-	UTP20,SLC5A8	-490,-70320
chr3:52100010-52100634	chr3	+	52100050	52100590	True	NM_001198898,NM_001947,NR_027331	chr3,chr3,chr3	+,-,-	ACY1,DUSP7,C3orf74	-82801,-9589,-922
chrX:36296809-36297860	chrX	+	36297006	36297695	True	NM_001098843,NM_006520	chrX,chrX	+,-	CXorf30,DYNLT3	-43014,1409251
chr9:34049404-34050260	chr9	+	34049404	34050284	True	NM_018449,NR_003690	chr9,chr9	-,+	UBAP2,SNORD121B	-457,-115169
chr9:125551735-125551941	chr9	+	125551745	125551889	True	NM_001001923,NM_005388	chr9,chr9	+,-	OR5C1,PDCL	-584,39096
chr1:84950676-84951914	chr1	+	84950676	84951933	True	NM_025065,NM_005274	chr1,chr1	+,-	RPF1,GNG5	-5814,20379
chr19:13857575-13858256	chr19	+	13857863	13858079	True	NR_036515,NM_030818	chr19,chr19	-,+	LOC284454,CCDC130	89074,673
chr15:71445990-71446576	chr15	+	71446051	71446504	True	NM_024817,NM_001102658	chr15,chr15	+,-	THSD4,CT62	-12314,-38212
chr19:9946771-9947175	chr19	+	9946878	9947104	True	NM_001048241,NM_024292,NM_006221,NM_017703	chr19,chr19,chr19,chr19	+,+,+,-	UBL5,UBL5,PIN1,FBXL12	-8361,-8361,-930,-17147
chr11:6632441-6633016	chr11	+	6632492	6632996	True	NM_001014794,NM_001014795,NM_015324,NM_004517,NM_000391,NM_006284	chr11,chr11,chr11,chr11,chr11,chr11	+,+,-,+,-,-	ILK,ILK,RRP8,ILK,TPP1,TAF10	-7579,-7336,-7681,-7579,7746,499
chr14:68196147-68197150	chr14	+	68196207	68197110	True	NM_016026,NM_152443	chr14,chr14	-,+	RDH11,RDH12	-33697,-27655
chr1:17698022-17698464	chr1	+	17698189	17698417	True	NM_001136204,NM_207421	chr1,chr1	-,+	RCC2,PADI6	66690,323
chr18:77797167-77797743	chr18	+	77797182	77797596	True	NM_024805,NM_001171967,NM_006701	chr18,chr18,chr18	+,+,-	RBFA,RBFA,TXNL4A	-2888,-2888,-48650
chr12:121473782-121474306	chr12	+	121474055	121474302	True	NM_198213,NM_003733,NM_000545	chr12,chr12,chr12	-,-,+	OASL,OASL,HNF1A	2535,2535,-57565
chr13:51739659-51740785	chr13	+	51739678	51740793	True	NR_003923,NM_145019	chr13,chr13	-,+	GUCY1B2,FAM124A	-99385,55713
chr1:237211506-237212336	chr1	+	237211638	237212217	True	NM_001035,NM_018072	chr1,chr1	+,-	RYR2,HEATR1	-5995,-443797
chr17:76617906-76618719	chr17	+	76617945	76618729	True	NM_173628,NM_024419	chr17,chr17	-,+	DNAH17,PGS1	-44469,-243261
chr1:25072526-25072798	chr1	+	25072546	25072792	True	NM_013943,NM_004350	chr1,chr1	+,-	CLIC4,RUNX3	-837,184028
chrX:136523135-136524039	chrX	+	136523134	136523909	True	NM_054021,NM_003413	chrX,chrX	-,+	GPR101,ZIC3	-409301,124436
chr2:3606282-3606564	chr2	+	3606294	3606606	True	NM_001011,NM_002936	chr2,chr2	+,-	RPS7,RNASEH1	16246,-354
chr2:62117513-62117830	chr2	+	62117624	62117693	True	NM_006430,NM_152516	chr2,chr2	-,+	CCT4,COMMD1	-1833,15109
chr1:204803916-204804650	chr1	+	204804034	204804698	True	NM_001005389,NM_001005388,NM_001160332,NM_001160333,NM_201630,NM_015090	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,-,+	NFASC,NFASC,NFASC,NFASC,LRRN2,NFASC	-6303,-6303,-6303,-6303,-149437,-6303
chr8:80525280-80525534	chr8	+	80525306	80525368	True	NM_001040708,NM_007029,NM_001199214	chr8,chr8,chr8	-,+,+	HEY1,STMN2,STMN2	154780,-2308,-2308
chr12:6487058-6487675	chr12	+	6487061	6487676	True	NM_001159576,NM_002342,NM_001159575,NM_001038	chr12,chr12,chr12,chr12	-,+,-,-	SCNN1A,LTBR,SCNN1A,SCNN1A	-2671,5680,-538,-2156
chr17:40197094-40198971	chr17	+	40197388	40198872	True	NM_017595,NR_029431	chr17,chr17	+,-	NKIRAS2,DNAJC7	-25353,-27673
chr16:72127558-72127898	chr16	+	72127558	72127863	True	NM_001142317,NM_017853,NM_014003,NM_001142318	chr16,chr16,chr16,chr16	-,-,+,-	TXNL4B,TXNL4B,DHX38,TXNL4B	-45,-19,6,402
chr5:141277509-141278576	chr5	+	141277721	141278566	True	NR_033244,NM_001142603	chr5,chr5	-,+	LOC729080,KIAA0141	-1461,24818
chr6:31113059-31113976	chr6	+	31113072	31113138	True	NM_014069,NM_001077511	chr6,chr6	-,+	PSORS1C2,TCF19	-5945,13164
chr17:61989351-61989757	chr17	+	61989456	61989750	True	NM_001318,NM_022579,NM_022581,NM_000515,NM_022560,NM_022580,NM_022562,NM_022561,NR_002947,NM_022559	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,-,-,-,+,-	CSHL1,CSHL1,CSHL1,GH1,GH1,CSHL1,GH1,GH1,TCAM1P,GH1	-838,-838,-838,6498,6498,-838,6498,6498,-55131,6498
chr6:46701947-46702274	chr6	+	46701984	46702272	True	NM_001162435,NM_001168357,NM_005084	chr6,chr6,chr6	+,-,-	LOC100287718,PLA2G7,PLA2G7	12381,1208,929
chr12:49367430-49367877	chr12	+	49367553	49367851	True	NM_003394,NM_005430	chr12,chr12	-,+	WNT10B,WNT1	-1912,4384
chr8:42013533-42013913	chr8	+	42013538	42013930	True	NM_006803,NM_001134296,NM_000930	chr8,chr8,chr8	+,+,-	AP3M2,AP3M2,PLAT	-3131,-3131,51314
chr11:705406-705690	chr11	+	705405	705673	True	NM_021008,NM_001042463,NM_174940,NM_022772	chr11,chr11,chr11,chr11	-,+,+,+	DEAF1,TMEM80,TMEM80,EPS8L2	-9665,-9840,-9840,446
chr3:112361000-112362191	chr3	+	112361125	112362161	True	NM_017945,NM_199511,NM_199512	chr3,chr3,chr3	+,-,-	SLC35A5,CCDC80,CCDC80	-80281,-1148,-1148
chr11:123986205-123986782	chr11	+	123986383	123986664	True	NM_198315,NM_014622,NM_001130142,NM_001004463	chr11,chr11,chr11,chr11	+,+,+,-	VWA5A,VWA5A,VWA5A,OR10G7	-323,-323,-323,-76675
chr22:24409504-24409941	chr22	+	24409534	24409614	True	NR_003082,NM_012295,NM_001199281,NM_001201429	chr22,chr22,chr22,chr22	-,+,+,+	GSTTP2,CABIN1,CABIN1,CABIN1	-7635,-1827,-1772,-1827
chr22:50946941-50947949	chr22	+	50947048	50947967	True	NM_014551,NM_033200,NM_001185011,NM_152299	chr22,chr22,chr22,chr22	+,-,+,+	NCAPH2,LMF2,NCAPH2,NCAPH2	-454,-913,-454,-454
chr9:129092318-129093934	chr9	+	129092392	129093980	True	NM_001006618,NM_001011703,NM_033446	chr9,chr9,chr9	-,+,+	MAPKAP1,FAM125B,FAM125B	-622879,-3315,-3315
chr21:38480307-38481572	chr21	+	38480453	38481264	True	NM_003316,NR_028352	chr21,chr21	+,-	TTC3,PIGP	-25260,-34995
chr2:158862283-158862835	chr2	+	158862369	158862700	True	NM_001111067,NM_001135098	chr2,chr2	-,+	ACVR1,UPP2	-129995,-10729
chr9:33819928-33821305	chr9	+	33819931	33820961	True	NR_003685,NM_017811	chr9,chr9	-,+	SNORD121A,UBE2R2	131949,-2812
chr12:109221437-109222407	chr12	+	109221564	109222338	True	NM_001917,NM_001161331	chr12,chr12	+,-	DAO,SSH1	51518,-237
chr1:153333426-153333996	chr1	+	153333478	153334034	True	NM_020393,NM_002965	chr1,chr1	-,+	PGLYRP4,S100A9	-12456,-3199
chr2:43997542-43999470	chr2	+	43997591	43999461	True	NM_015522,NM_022436,NM_001193464,NM_016008	chr2,chr2,chr2,chr2	+,-,+,+	DYNC2LI1,ABCG5,DYNC2LI1,DYNC2LI1	1716,66547,1716,1716
chr19:54133413-54134709	chr19	+	54133479	54134716	True	NM_001012728,NR_002938	chr19,chr19	+,-	DPRX,LOC284379	593,-26728
chr12:6545660-6546479	chr12	+	6545664	6546036	True	NM_001242,NR_015382	chr12,chr12	+,-	CD27,LOC678655	8014,14709
chr12:123866654-123867605	chr12	+	123866871	123867489	True	NM_020382,NM_018183	chr12,chr12	+,-	SETD8,SBNO1	1214,-31883
chr4:106502274-106503042	chr4	+	106502368	106503050	True	NM_176869,NM_017700	chr4,chr4	-,+	PPA2,ARHGEF38	-107141,-28642
chr14:78266971-78268002	chr14	+	78267089	78267942	True	NM_020421,NM_012245,NM_001142545	chr14,chr14,chr14	+,-,+	ADCK1,SNW1,ADCK1	-714,-39592,-714
chr13:45006936-45008445	chr13	+	45007061	45008216	True	NM_001010897,NM_006022	chr13,chr13	+,-	SERP2,TSC22D1	-59134,2821
chr10:94070-94620	chr10	+	94124	94524	True	NM_001164154,NM_177987,NM_006624	chr10,chr10,chr10	-,-,+	TUBB8,TUBB8,ZMYND11	1030,704,85880
chr7:32999817-33001231	chr7	+	33000285	33000831	True	NM_007270,NR_003500	chr7,chr7	+,-	FKBP9,RP9P	-3331,-17503
chr9:67685376-67687160	chr4	-	3543007	3543057	True	NM_002337,NM_173660	chr4,chr4	-,+	LRPAP1,DOK7	-8783,-78025
chr9:67685376-67687160	chr9	+	67685593	67686847	False	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	107392,239913
chr9:67685376-67687160	chr9	-	45105348	45106643	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-115163,-1474618
chr9:67685376-67687160	chr9	+	46276676	46277874	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2645946,409691
chrX:47004008-47004592	chrX	+	47004111	47004493	True	NR_024234,NR_024235,NM_001204468,NM_001204467,NM_001135998,NM_005676,NM_019056,NM_001204466,NM_152856	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,+,+,-,+,-,+,+	NDUFB11,NDUFB11,RBM10,RBM10,NDUFB11,RBM10,NDUFB11,RBM10,RBM10	166,166,123,123,-16,123,-16,123,123
chr17:41623010-41623241	chr17	+	41623099	41623289	True	NM_001079675,NM_004941,NM_001986	chr17,chr17,chr17	-,+,-	ETV4,DHX8,ETV4	523,-61816,66
chr7:47830221-47831315	chr7	+	47830615	47831316	True	NM_025031,NM_138295	chr7,chr7	+,-	C7orf69,PKD1L1	3572,156805
chr6:139140003-139140878	chr6	+	139140028	139140718	True	NM_001195037,NM_001128617	chr6,chr6	+,-	ECT2L,REPS1	-22836,168730
chr9:140033864-140034328	chr9	+	140034013	140034369	True	NM_000832,NM_013379,NM_007327,NM_021569,NM_001185090,NM_001185091	chr9,chr9,chr9,chr9,chr9,chr9	+,-,+,+,+,+	GRIN1,DPP7,GRIN1,GRIN1,GRIN1,GRIN1	-455,-24818,-455,-455,-455,-455
chr19:34400421-34400863	chr19	+	34400728	34400788	True	NM_001166057,NM_024076	chr19,chr19	-,+	PEPD,KCTD15	-387929,-113028
chr20:41818816-41819880	chr20	+	41819143	41819873	True	NM_133170,NM_007050,NM_006275	chr20,chr20,chr20	-,-,+	PTPRT,PTPRT,SRSF6	-586,-586,266630
chr2:103343306-103344471	chr2	+	103343370	103344512	True	NM_144632,NM_032718	chr2,chr2	+,-	TMEM182,MFSD9	33977,8875
chr19:44032134-44032977	chr19	+	44032221	44032894	True	NM_014297,NM_174945	chr19,chr19	-,+	ETHE1,ZNF575	-825,4445
chr3:132034329-132034560	chr3	+	132034531	132034609	True	NM_001099,NM_001134194,NM_130808	chr3,chr3,chr3	+,+,-	ACPP,ACPP,CPNE4	1601,1601,-280687
chr14:69263573-69264104	chr14	+	69263602	69264144	True	NM_207442,NM_004926,NM_001193360	chr14,chr14,chr14	-,-,+	C14orf181,ZFP36L1,EXD2	-412,-3817,394049
chr17:44245649-44246010	chr17_ctg5_hap1	-	1348824	1349240	False	NR_002940,NM_016632	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LRRC37A4,ARL17A	132136,164698
chr17:44245649-44246010	chr17_ctg5_hap1	-	620276	620693	False	NM_001193466,NR_034172	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	KIAA1267,LOC644246	-24162,-24890
chr17:44245649-44246010	chr17	+	44245648	44246065	True	NM_001193466,NR_034172	chr17,chr17	-,+	KIAA1267,LOC644246	24158,24873
chr8:144764480-144764968	chr8	+	144764484	144764781	True	NM_001162914,NM_001100598,NM_001100599,NM_173831	chr8,chr8,chr8,chr8	-,+,+,+	LOC100130274,ZNF707,ZNF707,ZNF707	25557,1840,1840,1840
chr4:166800385-166802028	chr4	+	166800417	166802012	True	NM_001204760,NR_026575,NM_012464	chr4,chr4,chr4	+,-,+	TLL1,GK3P,TLL1	-6071,-599242,-6071
chr11:111894162-111894515	chr11	+	111894161	111894304	True	NM_001931,NM_001082619	chr11,chr11	+,-	DLAT,PIH1D2	1233,50646
chr15:43667191-43668354	chr15	+	43667414	43668391	True	NM_014444,NM_152455	chr15,chr15	+,-	TUBGCP4,ZSCAN29	-4153,-5156
chr2:100724136-100725136	chr2	+	100724151	100725101	True	NM_001011717,NM_001025108	chr2,chr2	+,-	NMS,AFF3	361842,-2106
chr19:458973-459738	chr19	+	458999	459736	True	NM_012435,NM_130760	chr19,chr19	-,+	SHC2,MADCAM1	1310,36753
chr8:91324256-91324784	chr8	+	91324273	91324475	True	NM_004929,NM_001359	chr8,chr8	-,+	CALB1,DECR1	-229166,-310744
chr21:38366107-38366524	chr21	+	38366110	38366528	True	NM_000411,NM_018962	chr21,chr21	-,+	HLCS,DSCR6	-3574,12334
chr1:247694904-247695141	chr1	+	247694932	247695174	True	NM_145278,NR_027309,NM_198074	chr1,chr1,chr1	+,-,-	C1orf150,LOC148824,OR2C3	17276,-826,2017
chr1:41446393-41448220	chr1	+	41446393	41447755	True	NM_001905,NM_001168247	chr1,chr1	+,-	CTPS,SLFNL1	-1437,39692
chr10:29189739-29190198	chr10	+	29189956	29190246	True	NR_033805,NM_012342	chr10,chr10	-,+	LOC220906,BAMBI	-368673,-223586
chr12:9250735-9252031	chr12	+	9250866	9252080	True	NM_000014,NR_026971	chr12,chr12	-,+	A2M,LOC144571	16528,-33154
chr19:1904370-1904990	chr19	+	1904378	1904973	True	NM_079834,NM_031213,NM_138422	chr19,chr19,chr19	+,-,+	SCAMP4,FAM108A1,ADAT3	399,-18860,443
chr14:103850357-103851130	chr14	+	103850487	103851147	True	NM_001128918,NM_001128919,NM_001823,NM_001128920,NM_001128921,NM_002376	chr14,chr14,chr14,chr14,chr14,chr14	+,+,-,+,+,+	MARK3,MARK3,CKB,MARK3,MARK3,MARK3	553,553,138073,553,553,553
chr10:103818131-103818375	chr10	+	103818246	103818363	True	NM_024747,NM_024541	chr10,chr10	+,-	HPS6,C10orf76	6760,-2314
chr3:58420528-58421372	chr3	+	58420768	58421122	True	NR_033384,NM_001173468,NM_000925,NM_001128214	chr3,chr3,chr3,chr3	-,-,-,+	PDHB,PDHB,PDHB,KCTD6	-1202,-1189,-1189,56700
chr10:98484950-98486406	chr10	+	98485078	98486380	True	NM_152309,NM_001170765	chr10,chr10	-,+	PIK3AP1,LCOR	-4799,105636
chr2:145046691-145047149	chr2	+	145046907	145047031	True	NM_001006636,NR_033870	chr2,chr2	-,+	GTDC1,DKFZp686O1327	5079,378502
chr1:16679467-16680425	chr1	+	16679538	16680464	True	NM_018994,NM_001114600	chr1,chr1	-,+	FBXO42,C1orf144	-590,13118
chr20:37552924-37554363	chr20	+	37553154	37554411	True	NM_030919,NR_027124	chr20,chr20	+,-	FAM83D,LOC339568	543,299030
chr14:95624557-95626097	chr14	+	95624589	95625774	True	NR_015415,NM_177438	chr14,chr14	+,-	FLJ45244,DICER1	-615,-830
chr19:4231212-4231659	chr19	+	4231212	4231286	True	NM_005755,NM_016539	chr19,chr19	+,-	EBI3,SIRT6	-1723,-48616
chr19:57352721-57353908	chr19	+	57352772	57353924	True	NM_006210,NM_001146327,NM_001146326,NM_001146185,NM_001146184,NM_001146187,NR_024059,NM_015363	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,+,-	PEG3,ZIM2,ZIM2,PEG3,PEG3,PEG3,MIMT1,ZIM2	-678,-675,-675,-678,-678,-678,-553,-675
chrX:102164453-102166301	chrX	+	102165035	102165881	True	NM_018476,NM_001031834	chrX,chrX	-,+	BEX1,RAB40AL	153337,26318
chr21:28215929-28216278	chr21	+	28216125	28216259	True	NM_006988,NR_024357	chr21,chr21	-,+	ADAMTS1,NCRNA00113	1519,878438
chr22:50352661-50353220	chr22	+	50352897	50353161	True	NM_024105,NM_001001852	chr22,chr22	-,+	ALG12,PIM3	-40791,981
chr19:50000402-50001056	chr19	+	50000424	50001034	True	NR_001285,NR_026712,NR_000020,NR_000021,NM_012423,NR_000019,NR_000018,NM_001015,NR_029703	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,+,+,+,-	SNORD35B,RPL13AP5,SNORD33,SNORD32A,RPL13A,SNORD34,SNORD35A,RPS11,MIR150	-13,-9610,-6601,-7252,-9610,-6311,-6043,-841,3141
chrY:14452335-14454209	chrY	+	14452560	14454151	True	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	320146,79289
chr11:47512454-47513363	chr11	+	47513040	47513385	True	NM_001143984,NM_001025596,NM_198700,NM_001172640	chr11,chr11,chr11,chr11	+,-,-,-	PTPMT1,CELF1,CELF1,CELF1	73596,-2464,2745,-2464
chr19:45584975-45586451	chr19	+	45585280	45586383	True	NM_145288,NM_001007269,NM_024707,NM_001007270	chr19,chr19,chr19,chr19	-,+,+,+	ZNF296,GEMIN7,GEMIN7,GEMIN7	-5592,-2801,-2801,-2813
chr15:56034030-56034401	chr15	+	56034212	56034376	True	NM_173814,NM_001198784	chr15,chr15	-,+	PRTG,FLJ27352	855,-333542
chr17:42926661-42927099	chr17	+	42926661	42926852	True	NM_016438,NM_001080383	chr17,chr17	+,-	HIGD1B,GJC1	-1433,-18482
chr7:5229494-5229765	chr7	+	5229623	5229687	True	NM_016003,NM_015610,NR_034163,NM_001033519,NM_001033518	chr7,chr7,chr7,chr7,chr7	+,+,-,+,+	WIPI2,WIPI2,ZNF890P,WIPI2,WIPI2	147,147,-45446,147,147
chr16:50405126-50405682	chr16	+	50405131	50405661	True	NM_001114,NM_013263,NM_001173984	chr16,chr16,chr16	+,-,-	ADCY7,BRD7,BRD7	-83359,-2286,-2286
chr3:38355511-38356141	chr3	+	38355693	38356123	True	NM_004803,NR_028389	chr3,chr3	+,-	SLC22A14,LOC100128640	-8299,140238
chr14:31090964-31091372	chr14	+	31090998	31091374	True	NM_016106,NR_030354,NM_182835	chr14,chr14,chr14	+,-,+	SCFD1,MIR624,SCFD1	146,392624,146
chr1:205743801-205744162	chr1	+	205743813	205744203	True	NM_003929,NM_001135662,NM_001135663,NM_001135664,NM_181644	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	RAB7L1,RAB7L1,RAB7L1,RAB7L1,MFSD4	457,457,457,457,-205752
chr16:90114809-90115595	chr16	+	90114809	90115303	True	NR_027336,NR_027335,NR_023348	chr16,chr16,chr16	-,-,+	LOC100130015,LOC100130015,GAS8	-618,-776,-25859
chr22:38965813-38966222	chr22	+	38965831	38966163	True	NM_001002880,NM_007068	chr22,chr22	+,-	CBY1,DMC1	86494,76
chr10:69882989-69883257	chr10	+	69882992	69883054	True	NM_032578,NM_022079	chr10,chr10	+,-	MYPN,HERC4	-13793,-47889
chr4:109090104-109090363	chr4	+	109090331	109090411	True	NM_001130714,NM_001130713,NM_001166119,NR_029374,NM_016269,NR_029373	chr4,chr4,chr4,chr4,chr4,chr4	-,-,-,+,-,+	LEF1,LEF1,LEF1,LOC641518,LEF1,LOC641518	-219,-219,-2378,-1701,-219,2864
chr15:65927740-65928774	chr15	+	65927872	65928498	True	NM_001136043,NM_004727	chr15,chr15	-,+	C15orf44,SLC24A1	-24403,-13660
chr19:49177887-49178207	chr19	+	49177976	49178238	True	NM_000511,NM_145807	chr19,chr19	+,-	FUT2,NTN5	20989,-1712
chr8:17942456-17943410	chr8	+	17942541	17943419	True	NM_177924,NM_001127505,NM_004315,NM_001160179	chr8,chr8,chr8,chr8	-,-,-,+	ASAH1,ASAH1,ASAH1,NAT1	-662,-34,-34,84551
chr20:30034414-30034786	chr20	+	30034416	30034643	True	NM_001037500,NM_153324	chr20,chr20	-,+	DEFB124,DEFB123	26238,-6056
chrX:153171157-153171430	chrX	+	153171168	153171470	True	NM_001164741,NM_001146151,NM_000054,NR_027419	chrX,chrX,chrX,chrX	-,+,+,+	ARHGAP4,AVPR2,AVPR2,AVPR2	20294,-690,-690,-3234
chr1:43149145-43149978	chr1	+	43149218	43149994	True	NM_001123395,NM_004559	chr1,chr1	-,+	CLDN19,YBX1	55981,-1203
chr9:139557361-139557997	chr9	+	139557616	139557990	True	NM_016215,NM_201446,NR_029695,NM_001012727	chr9,chr9,chr9,chr9	+,+,+,-	EGFL7,EGFL7,MIR126,AGPAT2	-285,-290,7063,23971
chr6:53889940-53890551	chr6	+	53889999	53890525	True	NM_138569,NM_001003760	chr6,chr6	+,-	C6orf142,KLHL31	-6336,-359493
chr11:88735499-88736429	chr11	+	88735760	88736478	True	NM_001143831,NM_000372	chr11,chr11	-,+	GRM5,TYR	44812,174561
chr2:198571108-198571568	chr2	+	198571203	198571567	True	NM_144629,NM_138395	chr2,chr2	-,+	RFTN2,MARS2	-30619,-1226
chr17:27183330-27184216	chr17	+	27183381	27184088	True	NR_029685,NR_029970,NM_005702	chr17,chr17,chr17	-,-,+	MIR144,MIR451,ERAL1	4598,4420,-1389
chr1:120928895-120929337	chr1	+	120929120	120929206	True	NM_001004340,NR_027337,NM_001017986	chr1,chr1,chr1	-,+,-	FCGR1B,HIST2H2BA,FCGR1B	6788,-23137,6788
chr1:120928895-120929337	chr1	-	149376082	149376132	False	NR_027484,NM_001024599	chr1,chr1	+,-	FCGR1C,HIST2H2BF	-6839,23147
chr17:79316686-79317095	chr17	+	79316931	79317095	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	56444,-12457
chrX:105448120-105449217	chrX	+	105448137	105449262	True	NM_152423,NM_000354	chrX,chrX	+,-	MUM1L1,SERPINA7	-35890,-165419
chr22:50623845-50624161	chr22	+	50623914	50624048	True	NM_025204,NM_020461	chr22,chr22	+,-	TRABD,TUBGCP6	311,59402
chr17:16472038-16472251	chr17	+	16472050	16472300	True	NM_014695,NM_020653	chr17,chr17	+,-	CCDC144A,ZNF287	121338,270
chrX:53458764-53459651	chrX	+	53458768	53459288	True	NM_144968,NM_001037811,NM_006306,NM_001031745,NM_004493	chrX,chrX,chrX,chrX,chrX	+,-,-,+,-	RIBC1,HSD17B10,SMC1A,RIBC1,HSD17B10	-8980,2085,-9150,-8929,2085
chr17:30676181-30676454	chr17	+	30676184	30676330	True	NM_001098507,NM_022344,NR_030362,NM_001032293,NM_003457	chr17,chr17,chr17,chr17,chr17	+,-,+,+,+	ZNF207,C17orf75,MIR632,ZNF207,ZNF207	826,-6995,797,826,826
chr9:34401391-34401605	chr9	+	34401391	34401529	True	NM_012144,NM_032596	chr9,chr9	+,-	DNAI1,C9orf24	57281,-3542
chr20:17509840-17510792	chr20	+	17510091	17510821	True	NM_001011546,NM_001195	chr20,chr20	+,-	DSTN,BFSP1	39777,1242
chr10:35537291-35538832	chr10	+	35537784	35538704	True	NM_001198777,NM_181698	chr10,chr10	-,+	CUL2,CCNY	-158214,-1888
chr20:36975131-36975520	chr20	+	36975224	36975463	True	NM_004139,NR_002910	chr20,chr20	+,-	LBP,SNORA71B	-390,78566
chr22:44193353-44193705	chr22	+	44193353	44193658	True	NM_025225,NM_022785	chr22,chr22	+,-	PNPLA3,EFCAB6	125960,14610
chr6:42684650-42685195	chr6	+	42685128	42685230	True	NM_000322,NR_037141	chr6,chr6	-,+	PRPH2,LOC442211	5178,10083
chr4:54223062-54223976	chr4	+	54223722	54224010	True	NM_001134937,NM_152540	chr4,chr4	+,-	FIP1L1,SCFD2	19809,8282
chr17:57413068-57414639	chr17	+	57413212	57414424	True	NM_182620,NM_001005404	chr17,chr17	-,+	SKA2,YPEL2	-180412,-4210
chr2:169657313-169659068	chr2	+	169657587	169659077	True	NM_020675,NM_001171632,NM_001039724,NM_052946	chr2,chr2,chr2,chr2	-,+,+,+	SPC25,NOSTRIN,NOSTRIN,NOSTRIN	87917,22,22,29
chr15:81667983-81668642	chr15	+	81668013	81668692	True	NM_001080532,NM_004513	chr15,chr15	-,+	TMC3,IL16	-1595,-78817
chr3:88108354-88108688	chr3	+	88108478	88108668	True	NM_001008390,NM_003663,NM_000866	chr3,chr3,chr3	-,-,+	CGGBP1,CGGBP1,HTR1F	-332,-332,-76803
chrX:118936780-118938382	chrX	+	118936838	118937702	True	NM_001000,NM_001105576	chrX,chrX	-,+	RPL39,ANKRD58	-11232,-44313
chr5:37363724-37364532	chr5	+	37363790	37364497	True	NM_153485,NM_018034,NM_004298	chr5,chr5,chr5	-,+,-	NUP155,WDR70,NUP155	6761,14914,6451
chr8:76470665-76471132	chr8	+	76470760	76471132	True	NM_004133,NR_024360	chr8,chr8	+,-	HNF4G,LOC100192378	-18608,1124428
chr7:128419333-128419533	chr7	+	128419332	128419572	True	NM_001201372,NM_001708	chr7,chr7	+,-	CCDC136,OPN1SW	11891,-3488
chr16:10935119-10936277	chr16	+	10935130	10936307	True	NM_000246,NM_001079512	chr16,chr16	+,-	CIITA,FAM18A	34747,-22509
chr19:14543417-14543803	chr19	+	14543513	14543707	True	NM_005804,NM_213560,NM_002741	chr19,chr19,chr19	-,+,+	DDX39A,PKN1,PKN1	-13318,7378,458
chr12:110171502-110172179	chr12	+	110171534	110172203	True	NM_032829,NR_026661	chr12,chr12	+,-	C12orf34,MGC14436	-19398,39136
chr1:165797738-165798008	chr1	+	165797740	165798001	True	NM_019026,NM_012474	chr1,chr1	-,+	TMCO1,UCK2	-59605,-1062
chr14:96817995-96818653	chr14	+	96818386	96818640	True	NM_018036,NM_016472	chr14,chr14	-,+	ATG2B,C14orf129	11102,27381
chr1:145900746-145901971	chr1	+	145901141	145901682	True	NR_003377,NM_001097616	chr1,chr1	-,+	PDZK1P1,GPR89C	40994,-17336
chr1:145900746-145901971	chr1	-	145786813	145787122	False	NM_001097612,NM_002614	chr1,chr1	-,+	GPR89A,PDZK1	40043,-59203
chr1:145900746-145901971	chr1	+	147442846	147443387	False	NR_003377,NM_001097616	chr1,chr1	-,+	PDZK1P1,GPR89C	41001,-17342
chr14:20898733-20899741	chr14	+	20898744	20899460	True	NM_001109997,NM_001641	chr14,chr14	-,+	KLHL33,APEX1	4391,23829
chr6:28311461-28312777	chr6	+	28311802	28312542	True	NM_030899,NM_024493,NR_024165,NR_024164,NM_145909,NM_001135216	chr6,chr6,chr6,chr6,chr6,chr6	-,+,-,-,-,-	ZNF323,ZKSCAN3,ZNF323,ZNF323,ZNF323,ZNF323	-7650,5148,-7650,-7891,9482,-7891
chr20:3872108-3872424	chr20	+	3872139	3872440	True	NM_153640,NM_153638,NM_024960,NR_031722	chr20,chr20,chr20,chr20	+,+,+,-	PANK2,PANK2,PANK2,MIR103-2AS	-1735,-2456,-2712,25821
chr15:79603995-79604897	chr15	+	79604118	79604909	True	NM_002891,NM_007364	chr15,chr15	-,+	RASGRF1,TMED3	-220903,-678
chr6:163158734-163160680	chr6	+	163159378	163160057	True	NM_001080379,NM_013988	chr6,chr6	+,-	PACRG,PARK2	-10434,-10544
chr14:94938706-94939269	chr14	+	94938787	94939279	True	NM_006215,NM_001042518,NM_175739	chr14,chr14,chr14	+,-,-	SERPINA4,SERPINA9,SERPINA9	88503,3441,3441
chr19:19282520-19283004	chr19	+	19282776	19282864	True	NM_001145785,NM_003721	chr19,chr19	-,+	MEF2B,RFXANK	-1678,20143
chr2:220110582-220111465	chr2	+	220110658	220111448	True	NM_006000,NR_026909,NR_003063,NM_001008910,NM_024506	chr2,chr2,chr2,chr2,chr2	-,+,+,+,-	TUBA4A,STK16,TUBA4B,STK16,GLB1L	7240,-508,6516,-517,-527
chr19:7729511-7730925	chr19	+	7730120	7730825	True	NM_020415,NM_174895,NM_001193374	chr19,chr19,chr19	+,-,+	RETN,PCP2,RETN	3146,-31550,3146
chr20:3049566-3049812	chr20	+	3049624	3049798	True	NM_000490,NM_000915	chr20,chr20	-,+	AVP,OXT	15622,2467
chr5:157069043-157070351	chr5	+	157069375	157069906	True	NM_001145132,NM_007017,NM_178424	chr5,chr5,chr5	+,-,-	C5orf52,SOX30,SOX30	28654,9581,9581
chr3:184972588-184973561	chr3	+	184972675	184973451	True	NM_001966,NM_004721,NM_001166415	chr3,chr3,chr3	-,+,-	EHHADH,MAP3K13,EHHADH	-789,107518,-789
chr11:64809281-64809860	chr11	+	64809315	64809527	True	NM_005468,NM_013299	chr11,chr11	-,+	NAALADL1,SAC3D1	16532,-990
chr9:74679396-74679817	chr9	+	74679439	74679795	True	NM_004293,NM_001128618	chr9,chr9	+,-	GDA,C9orf57	84497,-3918
chr14:61202182-61203414	chr14	+	61202343	61203454	True	NM_002431,NM_001177963,NM_017420	chr14,chr14,chr14	+,+,-	MNAT1,MNAT1,SIX4	-935,-935,-11491
chr14:21243820-21245343	chr14	+	21243833	21245003	True	NM_005615,NM_198232,NM_022360	chr14,chr14,chr14	+,-,+	RNASE6,RNASE1,EDDM3B	4206,25613,-7305
chr11:71848072-71849334	chr11	+	71848287	71849016	True	NM_014042,NM_000804	chr11,chr11	-,+	C11orf51,FOLR3	-24465,-1573
chr1:46931139-46932047	chr1	+	46931467	46931857	True	NM_147192,NM_001097611	chr1,chr1	+,-	DMBX1,KNCN	40810,85080
chr6:167706891-167707418	chr6	+	167706897	167707457	True	NM_004610,NM_018974,NM_001143947	chr6,chr6,chr6	-,+,+	TCP10,UNC93A,UNC93A	90591,-2145,-2145
chr2:216947592-216948377	chr2	+	216947628	216948420	True	NM_018441,NM_001142312,NM_138390,NM_001142310,NM_001142311	chr2,chr2,chr2,chr2,chr2	-,+,+,+,+	PECR,TMEM169,TMEM169,TMEM169,TMEM169	-1089,-1090,-1090,-1090,-1090
chr19:39833873-39834276	chr19	+	39834221	39834283	True	NM_018028,NM_004877	chr19,chr19	+,-	SAMD4B,GMFG	-1164,-7495
chr22:38081505-38081788	chr22	+	38081547	38081757	True	NM_002305,NM_006498,NM_024313	chr22,chr22,chr22	+,-,+	LGALS1,LGALS2,NOL12	-9985,-105523,586
chr7:65447918-65448249	chr7	+	65448128	65448256	True	NM_000181,NM_000048	chr7,chr7	-,+	GUSB,ASL	-827,92519
chr3:49029308-49029758	chr3	+	49029339	49029717	True	NM_001009996,NM_177938,NM_177939	chr3,chr3,chr3	-,+,+	DALRD3,P4HTM,P4HTM	26362,-2049,-2049
chr19:4557895-4558121	chr19	+	4557902	4558170	True	NM_152362,NM_032108	chr19,chr19	+,-	TNFAIP8L1,SEMA6B	81356,1651
chr11:128813012-128813401	chr11	+	128813020	128813388	True	NM_000890,NM_001195194,NM_001195195,NM_022112	chr11,chr11,chr11,chr11	+,-,-,-	KCNJ5,TP53AIP1,TP53AIP1,TP53AIP1	-51758,-5291,-44,-44
chr11:8106263-8106544	chr11	+	8106304	8106554	True	NM_177972,NM_001135109	chr11,chr11	+,-	TUB,RIC3	-3446,84086
chr7:29518995-29519407	chr7	+	29519015	29519381	True	NM_001039936,NR_024278	chr7,chr7	+,-	CHN2,LOC646762	104,205425
chrX:48380548-48380794	chrX	+	48380552	48380764	True	NM_006579,NM_033518	chrX,chrX	+,-	EBP,SLC38A5	-439,-51908
chr1:31382134-31382914	chr1	+	31382342	31382924	True	NR_002762,NM_014654	chr1,chr1	+,-	PRO0611,SDC3	77987,-862
chr15:81439668-81440254	chr15	+	81439678	81440306	True	NM_015154,NM_173528	chr15,chr15	-,+	MESDC2,C15orf26	-157473,-13085
chr12:6741430-6742053	chr12	+	6741473	6741899	True	NM_001164094,NM_001142961,NM_020400	chr12,chr12,chr12	+,-,-	COPS7A,LPAR5,LPAR5	91250,-658,3448
chr9:6643056-6644257	chr9	+	6643217	6644296	True	NM_000170,NM_001146696	chr9,chr9	-,+	GLDC,KDM4C	1446,76566
chr1:95293541-95294516	chr1	+	95293549	95294316	True	NM_001114106,NM_152369,NM_001839	chr1,chr1,chr1	+,+,-	SLC44A3,SLC44A3,CNN3	-7699,-7500,98469
chr10:32049965-32050618	chr10	+	32049969	32050347	True	NM_001174094,NM_018287	chr10,chr10	+,-	ZEB1,ARHGAP12	-439956,167473
chr19:1848650-1850153	chr19	+	1848792	1850176	True	NR_034114,NM_020695	chr19,chr19	+,-	LOC100288123,REXO1	-26755,-340
chr6:34544058-34544937	chr6	+	34544062	34544988	True	NM_001199583,NM_012391	chr6,chr6	+,-	PACSIN1,SPDEF	-61464,-19971
chr3:129245509-129246645	chr3	+	129245576	129246392	True	NM_000539,NM_015103	chr3,chr3	+,-	RHO,PLXND1	1089,79240
chr1:27668115-27668439	chr1	+	27668122	27668341	True	NM_032872,NM_001193308,NM_004672	chr1,chr1,chr1	+,+,-	SYTL1,SYTL1,MAP3K6	141,141,25047
chr19:40951189-40952020	chr19	+	40951556	40952068	True	NM_013368,NM_020971,NM_203344	chr19,chr19,chr19	-,+,-	SERTAD3,SPTBN4,SERTAD3	-3051,21057,-1274
chr16:84731410-84732291	chr16	+	84731606	84732116	True	NM_005153,NM_021149	chr16,chr16	+,-	USP10,COTL1	1438,-79937
chr17:39535547-39536232	chr17	+	39535854	39536228	True	NM_030975,NM_021013,NM_002279	chr17,chr17,chr17	+,-,-	KRTAP9-9,KRT34,KRT33B	-124269,2458,-9807
chr17:56408434-56409640	chr17	+	56408577	56409689	True	NM_024418,NM_004758,NR_027647,NR_029683	chr17,chr17,chr17,chr17	-,-,+,-	BZRAP1,BZRAP1,LPO,MIR142	-2425,-2425,-92841,64
chr19:58425776-58426057	chr19	+	58425901	58426099	True	NM_032828,NM_152475	chr19,chr19	+,-	ZNF587,ZNF417	-64784,1929
chrX:30670806-30671049	chrX	+	30670858	30670962	True	NM_203391,NM_000167,NM_001205019,NM_025159,NM_001128127	chrX,chrX,chrX,chrX,chrX	+,+,+,-,+	GK,GK,GK,CXorf21,GK	513,513,513,-74825,513
chr19:39907022-39907504	chr19	+	39907168	39907244	True	NM_003407,NM_001020,NM_022835	chr19,chr19,chr19	+,-,+	ZFP36,RPS16,PLEKHG2	-9732,19424,-3469
chr2:40646368-40647065	chr2	+	40646377	40647079	True	NM_001112800,NM_152390	chr2,chr2	-,+	SLC8A1,TMEM178	10421,-753393
chr3:129938815-129939540	chr3	+	129938882	129939540	True	NR_027898,NR_024252	chr3,chr3	+,-	COL6A4P2,LOC729375	-7273,-108606
chr17:56060139-56060475	chr17	+	56060144	56060514	True	NM_007146,NM_080677	chr17,chr17	-,+	VEZF1,DYNLL2	5151,100265
chr17:79848411-79848631	chr17	+	79848504	79848678	True	NM_016476,NM_005782,NM_001002249,NM_001002248,NM_001002247,NM_001002246,NM_001002245,NM_001002244	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,-,+,+,+,+,+,+	ANAPC11,THOC4,ANAPC11,ANAPC11,ANAPC11,ANAPC11,ANAPC11,ANAPC11	920,834,1139,920,920,920,920,920
chr3:49170584-49171134	chr3	+	49170806	49171176	True	NM_173546,NM_002292	chr3,chr3	+,-	KLHDC8B,LAMB2	37841,-207
chr19:2097987-2099020	chr19	+	2098033	2098992	True	NM_001031735,NM_001039846,NM_130807	chr19,chr19,chr19	+,+,-	IZUMO4,IZUMO4,MOBKL2A	-1216,-1216,-1764
chrX:77913554-77914089	chrX	+	77913749	77914107	True	NM_152694,NM_005296	chrX,chrX	-,+	ZCCHC5,LPAR4	768,89098
chr5:72696142-72696782	chr5	+	72696147	72696801	True	NM_004472,NM_001037637	chr5,chr5	-,+	FOXD1,BTF3	47601,97448
chr8:37401474-37402356	chr8	+	37401700	37401974	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	151326,203640
chr19:44303125-44303486	chr19	+	44303158	44303354	True	NM_001031749,NM_181845	chr19,chr19	-,+	LYPD5,ZNF283	3309,28118
chr8:15100434-15100941	chr8	+	15100433	15100825	True	NM_139167,NM_006765	chr8,chr8	-,+	SGCZ,TUSC3	-4641,296770
chr1:29451645-29451934	chr1	+	29451651	29451961	True	NM_001003682,NM_001195001,NM_001171868	chr1,chr1,chr1	-,+,-	TMEM200B,PTPRU,TMEM200B	-1230,111066,-2638
chr4:38807257-38807947	chr4	+	38807302	38807835	True	NM_003263,NM_138389	chr4,chr4	-,+	TLR1,FAM114A1	-890,61518
chr12:119770951-119772352	chr12	+	119771122	119772202	True	NR_024246,NM_178499	chr12,chr12	-,+	LOC144742,CCDC60	-29937,314
chr1:151255578-151255784	chr1	+	151255586	151255750	True	NM_020832,NM_001198773	chr1,chr1	+,-	ZNF687,PI4KB	-846,44433
chr17:47048537-47049387	chr17	+	47048802	47049296	True	NM_001160423,NM_004123	chr17,chr17	+,-	IGF2BP1,GIP	25477,-2847
chr8:12588839-12589069	chr8	+	12588870	12589120	True	NR_037492,NR_037495	chr8,chr8	-,+	MIR3926-1,MIR3926-2	-4057,-4175
chr17:36829228-36829742	chr17	+	36829360	36829762	True	NM_005937,NM_001130677	chr17,chr17	+,-	MLLT6,C17orf96	32110,1475
chr19:11617725-11617973	chr19	+	11617810	11618008	True	NM_138783,NM_001299	chr19,chr19	-,+	ZNF653,CNN1	-1072,31570
chr1:26322266-26322785	chr1	+	26322329	26322578	True	NM_000437,NM_004455	chr1,chr1	-,+	PAFAH2,EXTL1	2131,25692
chr6:99282427-99282720	chr6	+	99282670	99282762	True	NM_005604,NM_012160	chr6,chr6	+,-	POU3F2,FBXL4	-141,113137
chr16:2589661-2590518	chr16	+	2589720	2590378	True	NM_001048212,NR_036139,NM_031268,NM_002613	chr16,chr16,chr16,chr16	-,-,+,+	CEMP1,MIR3178,PDPK1,PDPK1	-8311,-7714,-1801,-1801
chr16:2589661-2590518	chr16	-	2721268	2721318	False	NM_031948,NM_018992	chr16,chr16	-,+	PRSS27,KCTD5	49284,11176
chr17:28820308-28822060	chr17	+	28820353	28821396	True	NM_206832,NM_004871	chr17,chr17	-,+	TMIGD1,GOSR1	-159288,-15991
chr10:5439571-5440103	chr10	+	5439595	5439965	True	NM_001047160,NM_001171864,NM_024803	chr10,chr10,chr10	+,-,-	NET1,TUBAL3,TUBAL3	14552,6878,6878
chrX:110231132-110232263	chrX	+	110231301	110232298	True	NM_001128167,NM_001143983	chrX,chrX	+,-	PAK3,CHRDL1	-43847,-192015
chr16:65154927-65155216	chr16	+	65154935	65155111	True	NM_001795,NM_001797	chr16,chr16	+,-	CDH5,CDH11	1245413,858
chr17:40832279-40832486	chr17	+	40832284	40832532	True	NM_016602,NM_024927,NM_003632	chr17,chr17,chr17	-,-,+	CCR10,PLEKHH3,CNTNAP1	1363,-3236,2099
chr6:78173370-78173730	chr6	+	78173451	78173631	True	NM_000863,NM_001010844	chr6,chr6	-,+	HTR1B,IRAK1BP1	-331,1403557
chr22:17073296-17074351	chr22	+	17073559	17073944	True	NM_014406,NR_001591	chr22,chr22	-,+	CCT8L2,psiTPTE22	-47,8856
chr2:233736099-233736611	chr2	+	233736124	233736654	True	NM_001114090,NM_206895	chr2,chr2	-,+	NGEF,C2orf82	56257,-1181
chr19:12142912-12144256	chr19	+	12143044	12143815	True	NM_001136501,NM_001080411	chr19,chr19	+,-	ZNF844,ZNF433	31730,2760
chr11:65547606-65548011	chr11	+	65547709	65547975	True	NM_138368,NM_004561	chr11,chr11	-,+	DKFZp761E198,OVOL1	1,6553
chr1:11942336-11942933	chr1	+	11942352	11942880	True	NM_002521,NR_037806	chr1,chr1	-,+	NPPB,NPPA-AS1	-23360,-42028
chr8:92293527-92293744	chr8	+	92293569	92293705	True	NM_018710,NM_052832	chr8,chr8	-,+	TMEM55A,SLC26A7	-240366,-32118
chr6:100016755-100017065	chr6	+	100016764	100016983	True	NM_005190,NM_021620,NM_001013399	chr6,chr6,chr6	-,+,-	CCNC,PRDM13,CCNC	-74,37666,-74
chr1:40783130-40785091	chr1	+	40783400	40784978	True	NM_022733,NM_001852	chr1,chr1	+,-	SMAP2,COL9A2	54399,-461
chr19:3364222-3365476	chr19	+	3364266	3365360	True	NM_005597,NM_001136503,NM_205843	chr19,chr19,chr19	+,-,+	NFIC,C19orf77,NFIC	1212,115230,-4701
chr1:156184759-156186036	chr1	+	156184955	156185867	True	NM_001199654,NM_007221,NM_198406,NM_001199662,NM_001199663,NM_001199661,NM_001199653,NM_001199664	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,+,+,+,+,+	PMF1,PMF1,PAQR6,PMF1-BGLAP,PMF1-BGLAP,PMF1-BGLAP,PMF1,PMF1-BGLAP	-2227,-2227,31976,-2227,-2227,-2227,-2227,-2227
chr11:67775701-67776121	chr11	+	67775839	67776151	True	NM_001030010,NM_030930,NM_000694,NM_001161473	chr11,chr11,chr11,chr11	+,-,+,+	ALDH3B1,UNC93B1,ALDH3B1,ALDH3B1	1638,-4246,1638,-96
chr10:75671151-75671460	chr10	+	75671335	75671417	True	NM_002658,NM_001001791,NM_001145031	chr10,chr10,chr10	+,-,+	PLAU,C10orf55,PLAU	-524,11168,-524
chr8:23711073-23712207	chr8	+	23711206	23712162	True	NM_003155,NM_016612	chr8,chr8	-,+	STC1,SLC25A37	211,-324894
chr6:131909066-131910825	chr6	+	131909256	131910729	True	NM_015979,NM_000045	chr6,chr6	-,+	MED23,ARG1	38685,-14942
chr19:51328449-51329814	chr19	+	51328500	51329700	True	NM_138564,NM_001030050,NM_138563,NM_002257,NM_017509	chr19,chr19,chr19,chr19,chr19	-,+,-,-,-	KLK15,KLK3,KLK15,KLK1,KLK15	5131,28470,5131,-1457,5131
chr8:87528911-87529645	chr8	+	87528911	87529689	True	NM_016033,NM_003909	chr8,chr8	-,+	FAM82B,CPNE3	-7902,-2311
chr10:13140941-13141142	chr10	+	13141079	13141181	True	NM_031455,NM_021980,NM_001008212,NM_001008213,NM_001008211	chr10,chr10,chr10,chr10,chr10	-,+,+,+,+	CCDC3,OPTN,OPTN,OPTN,OPTN	-97375,900,900,900,900
chr2:75906883-75908323	chr2	+	75906885	75908145	True	NM_001201334,NM_014763	chr2,chr2	-,+	C2orf3,MRPL19	29637,-33027
chr16:68002289-68002528	chr16	+	68002321	68002469	True	NM_001145961,NM_001145962,NM_001145963,NM_001145964,NM_005072,NM_017803	chr16,chr16,chr16,chr16,chr16,chr16	-,-,-,-,-,+	SLC12A4,SLC12A4,SLC12A4,SLC12A4,SLC12A4,DUS2L	178,178,-4353,-1540,178,54734
chr22:42948267-42948760	chr22	+	42948515	42948629	True	NR_002184,NM_014509	chr22,chr22	-,+	RRP7B,SERHL2	29446,1295
chr10:14999938-15000263	chr10	+	14999946	15000303	True	NM_001080836,NM_001033858,NM_022487,NM_001033857,NM_001033855	chr10,chr10,chr10,chr10,chr10	+,-,-,-,-	MEIG1,DCLRE1C,DCLRE1C,DCLRE1C,DCLRE1C	1134,-3852,-3852,-3852,-3852
chr6:43857758-43858214	chr6	+	43857928	43858196	True	NR_024478,NM_018135	chr6,chr6	+,-	LOC100132354,MRPS18A	568,-202379
chr4:124758063-124758973	chr4	+	124758079	124758870	True	NM_020337,NR_027106	chr4,chr4	-,+	ANKRD50,LOC285419	875073,-62711
chr9:124504230-124504630	chr9	+	124504233	124504415	True	NR_003191,NM_138709	chr9,chr9	-,+	GGTA1,DAB2IP	-241927,648
chr17:45287591-45288045	chr17	+	45287811	45288083	True	NM_002476,NM_001002841,NM_001256	chr17,chr17,chr17	+,+,-	MYL4,MYL4,CDC27	-1148,-1434,-21146
chr15:69589419-69590277	chr15	+	69589485	69590315	True	NM_017705,NM_006305	chr15,chr15	+,-	PAQR5,ANP32A	978,-476224
chr3:12842627-12843128	chr3	+	12842827	12843077	True	NM_012298,NR_002582,NM_001162499	chr3,chr3,chr3	+,-,+	CAND2,SNORA7A,CAND2	-4715,38922,-4715
chrX:135570650-135571702	chrX	+	135570665	135571729	True	NM_001163280,NM_001727,NM_014500,NM_001173516	chrX,chrX,chrX,chrX	+,+,+,-	HTATSF1,BRS3,HTATSF1,MAP7D3	7508,-591,7941,-232024
chr3:149529430-149530131	chr3	+	149529625	149530173	True	NM_007282,NM_001144960,NM_183381	chr3,chr3,chr3	+,-,+	RNF13,C3orf16,RNF13	301,-19015,301
chr15:76028781-76029259	chr15	+	76028815	76029253	True	NM_175881,NR_024595	chr15,chr15	+,-	ODF3L1,DNM1P35	-12547,3299
chr2:27300616-27301295	chr2	+	27300835	27301097	True	NM_007046,NM_001134693,NM_000221,NM_006488	chr2,chr2,chr2,chr2	+,-,+,+	EMILIN1,OST4,KHK,KHK	337,-6268,8513,8513
chr15:81610206-81611664	chr15	+	81610254	81611710	True	NM_181900,NM_004513	chr15,chr15	-,+	STARD5,IL16	4864,-21051
chr11:59371528-59372548	chr11	+	59371527	59371705	True	NM_001004711,NR_036120	chr11,chr11	+,-	OR4D9,MIR3162	-89192,-8896
chr17:66256927-66257210	chr17	+	66256927	66257191	True	NM_014960,NM_001174166	chr17,chr17	+,-	ARSG,SLC16A6	-1655,30264
chrX:54948304-54949025	chrX	+	54948306	54949006	True	NM_002625,NM_001039705,NM_177556,NM_016157	chrX,chrX,chrX,chrX	-,+,+,+	PFKFB1,TRO,TRO,TRO	71555,-1108,-1108,-1108
chr2:179057757-179058469	chr2	+	179057768	179058481	True	NM_001201482,NM_001201480,NM_001201481,NM_001077197,NM_032523	chr2,chr2,chr2,chr2,chr2	+,+,+,-,+	OSBPL6,OSBPL6,OSBPL6,PDE11A,OSBPL6	726,726,726,-84702,726
chr20:61194022-61194376	chr20	+	61194072	61194410	True	NR_033263,NR_029676	chr20,chr20	-,+	C20orf200,MIR133A2	-45304,-32004
chr17:26552682-26552885	chr17	+	26552770	26552901	True	NR_003064,NR_028334	chr17,chr17	+,-	PYY2,FLJ40504	687,81558
chrX:135381676-135382495	chrX	+	135381913	135382488	True	NM_001173516,NM_153834	chrX,chrX	-,+	MAP7D3,GPR112	-43272,633
chr11:5614002-5615628	chr11	+	5614431	5615446	True	NM_001003819,NM_001003818,NM_001005289,NM_001198645,NM_001198644,NM_058166	chr11,chr11,chr11,chr11,chr11,chr11	+,+,-,+,+,+	TRIM6-TRIM34,TRIM6,OR52H1,TRIM6,TRIM6,TRIM6	2418,2418,-47678,2418,2418,1884
chr20:39993712-39994076	chr20	+	39993715	39993917	True	NM_022896,NM_052846	chr20,chr20	+,-	LPIN3,EMILIN3	-24206,1631
chr19:46388481-46388724	chr19	+	46388483	46388741	True	NM_004497,NM_015649	chr19,chr19	+,-	FOXA3,IRF2BP1	-21016,685
chr17:63101796-63102002	chr17	+	63101801	63102045	True	NM_006572,NM_001165933	chr17,chr17	-,+	GNA13,RGS9	-48881,31410
chr2:8110816-8111459	chr2	+	8110849	8111403	True	NM_002166,NR_015405	chr2,chr2	+,-	ID2,LOC339788	710709,5600
chr19:7912100-7912752	chr19	+	7912625	7912701	True	NM_001159944,NM_001190467	chr19,chr19	+,-	EVI5L,FLJ22184	-1290,26675
chr2:24406968-24407782	chr2	+	24407278	24407543	True	NM_001040710,NM_199346	chr2,chr2	+,-	C2orf84,PFN4	-9370,-61127
chr19:59083813-59084215	chr19	+	59083825	59084217	True	NM_003422	chr19	-	MZF1	775
chr22:24058032-24058343	chr22	+	24058134	24058323	True	NR_024448,NM_153615	chr22,chr22	-,+	LOC91316,RGL4	1338,-25137
chr19:54762582-54763055	chr19	+	54762720	54762868	True	NM_001013,NM_001081442,NM_001081443,NM_006840	chr19,chr19,chr19,chr19	+,-,-,-	RPS9,LILRB5,LILRB5,LILRB5	-58045,-1553,-1553,-1553
chr2:238322316-238322882	chr2	+	238322354	238322670	True	NM_001042467,NM_057164,NM_057165,NM_057166,NM_057167,NM_004369	chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-	MLPH,COL6A3,COL6A3,COL6A3,COL6A3,COL6A3	73207,230,230,230,230,230
chr2:130955338-130955719	chr2	+	130955486	130955642	True	NM_025029,NM_207312	chr2,chr2	+,-	MZT2B,TUBA3E	-16036,442
chr2:130955338-130955719	chr2	-	132234162	132234218	False	NM_001085365,NM_080386	chr2,chr2	-,+	MZT2A,TUBA3D	15896,-547
chr20:17530403-17531276	chr20	+	17530627	17530920	True	NM_001011546,NM_001161705	chr20,chr20	+,-	DSTN,BFSP1	19678,8742
chr2:86423632-86424162	chr2	+	86423792	86424204	True	NM_006839,NM_016622,NM_001100170,NM_145644,NM_001100169	chr2,chr2,chr2,chr2,chr2	-,+,-,+,-	IMMT,MRPL35,IMMT,MRPL35,IMMT	-899,2351,-899,2351,-899
chr19:15214724-15216424	chr19	+	15215116	15216263	True	NM_006844,NM_033025	chr19,chr19	-,+	ILVBL,SYDE1	20365,1950
chr3:57525869-57527060	chr3	+	57526076	57526766	True	NM_198564,NM_178504,NM_177966	chr3,chr3,chr3	-,-,+	DNAH12,DNAH12,PDE12	3359,3359,15214
chr7:128694664-128694866	chr7	+	128694723	128694909	True	NM_001191028,NM_012470,NR_002187,NR_034053	chr7,chr7,chr7,chr7	-,-,+,-	TNPO3,TNPO3,TPI1P2,TNPO3	368,368,367,368
chr16:67235039-67235711	chr16	+	67235284	67235746	True	NM_001950,NM_024712,NR_029887	chr16,chr16,chr16	+,+,-	E2F4,ELMO3,MIR328	-9267,-2307,602
chr16:66729636-66729853	chr16	+	66729657	66729887	True	NR_037619,NM_178818,NM_181521	chr16,chr16,chr16	+,-,-	CMTM3,CMTM4,CMTM4	-91074,773,773
chr5:122972138-122972555	chr5	+	122972167	122972379	True	NM_004384,NM_153223	chr5,chr5	+,-	CSNK1G3,CEP120	-124425,-212881
chr7:5599079-5599503	chr7	+	5599411	5599471	True	NM_001101,NM_003088	chr7,chr7	-,+	ACTB,FSCN1	-29179,32982
chr6:29862177-29863485	chr6	+	29862651	29862721	True	NR_001317,NR_001434,NR_001318	chr6,chr6,chr6	-,+,+	HCG4P6,HLA-H,HCG2P7	30763,-7327,4086
chr9:35082751-35083304	chr9	+	35083052	35083247	True	NM_203299,NM_004629	chr9,chr9	+,-	C9orf131,FANCG	-40890,-3039
chr10:101292140-101292475	chr10	+	101292163	101292489	True	NM_031212,NM_145285	chr10,chr10	-,+	SLC25A28,NKX2-3	87782,200
chr6:6611918-6613456	chr6	+	6612003	6612805	True	NM_004271,NR_026970	chr6,chr6	+,-	LY86,LY86-AS1	-23127,10304
chr3:52706669-52707094	chr3	+	52706799	52706996	True	NM_014366,NM_018165,NM_181042	chr3,chr3,chr3	+,-,-	GNL3,PBRM1,PBRM1	12939,6800,6800
chr16:83999980-84001514	chr16	+	84000325	84000917	True	NM_001080442,NM_019065	chr16,chr16	-,+	SLC38A8,NECAB2	74895,1319
chr12:28120370-28121993	chr12	+	28120569	28121939	True	NM_020782,NM_002820,NM_198966,NM_198964,NM_198965	chr12,chr12,chr12,chr12,chr12	+,-,-,-,-	KLHDC5,PTHLH,PTHLH,PTHLH,PTHLH	-187446,3027,1005,1005,3027
chr17:29890958-29891543	chr17	+	29890969	29891575	True	NR_029710,NM_014210	chr17,chr17	+,-	MIR193A,EVI2A	-4005,-242202
chr10:124598061-124598463	chr10	+	124598069	124598501	True	NR_037912,NR_027282,NM_022034	chr10,chr10,chr10	-,+,-	CUZD1,LOC399815,CUZD1	7240,40647,7240
chr1:112178893-112179607	chr1	+	112179025	112179656	True	NM_002884,NR_034126	chr1,chr1	+,-	RAP1A,LOC100129269	-16678,-28085
chrX:153523438-153523895	chrX	+	153523451	153523917	True	NM_001205201,NM_001145934,NM_001145933,NM_012253,NM_001586	chrX,chrX,chrX,chrX,chrX	-,+,+,+,-	TEX28,TKTL1,TKTL1,TKTL1,TEX28	77,9491,109,109,3
chr13:31000015-31001656	chr13	+	31000567	31001631	True	NM_005800,NM_002128	chr13,chr13	+,-	USPL1,HMGB1	190198,38500
chr3:49141112-49141820	chr3	+	49141146	49141818	True	NM_173546,NM_005051,NM_017730,NM_198880	chr3,chr3,chr3,chr3	+,-,-,-	KLHDC8B,QARS,QRICH1,QRICH1	67199,403,-9642,-9642
chr12:47614334-47615922	chr12	+	47614452	47615600	True	NM_138371,NR_026544	chr12,chr12	+,-	FAM113B,LOC100233209	-4454,-4226
chr2:102316440-102318418	chr2	+	102316522	102318091	True	NM_145687,NM_145686,NM_004834,NM_001145664	chr2,chr2,chr2,chr2	+,+,+,-	MAP4K4,MAP4K4,MAP4K4,RFX8	-2085,-2085,-2085,-225357
chrX:153627681-153628213	chrX	+	153627703	153628115	True	NM_006013,NM_006730,NR_000011,NR_026898	chrX,chrX,chrX,chrX	+,-,+,+	RPL10,DNASE1L1,SNORA70,RPL10	-1183,9510,506,-1183
chr8:143866001-143866374	chr8	+	143866265	143866379	True	NM_177477,NM_177476,NM_177457,NM_002066,NM_003695,NM_023946	chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,+,-,-	LYNX1,LYNX1,LYNX1,GML,LY6D,LYNX1	-7521,-7828,-6625,49837,1681,-6626
chr19:15618593-15618819	chr19	+	15618602	15618788	True	NM_173483,NM_052890	chr19,chr19	+,-	CYP4F22,PGLYRP2	547,-28287
chr8:101170669-101171598	chr8	+	101170807	101171643	True	NM_172218,NM_003114,NM_005034,NR_036491	chr8,chr8,chr8,chr8	+,+,+,-	SPAG1,SPAG1,POLR2K,FBXO43	-595,-295,-8019,-12708
chrX:71456466-71457253	chrX	+	71456510	71457002	True	NM_001170747,NM_017669	chrX,chrX	+,-	PIN4,ERCC6L	-55036,1910
chrX:71930996-71932656	chrX	+	71931156	71932464	True	NM_002637,NM_001122670,NM_001080851,NM_001172436	chrX,chrX,chrX,chrX	-,-,+,-	PHKA1,PHKA1,DMRTC1B,PHKA1	1624,1624,132411,1624
chr22:25833570-25833903	chr22	+	25833626	25833950	True	NM_001135772,NR_033733	chr22,chr22	-,+	LRP5L,CRYBB2P1	-56082,10103
chr12:9148244-9149925	chr12	+	9148670	9149972	True	NM_002355,NM_005810	chr12,chr12	-,+	M6PR,KLRG1	-46418,-6509
chr4:120095817-120097497	chr4	+	120096285	120097349	True	NM_001001701,NM_019050	chr4,chr4	-,+	C4orf3,USP53	124682,36432
chr7:87936383-87936921	chr7	+	87936396	87936918	True	NM_024636,NM_021723	chr7,chr7	-,+	STEAP4,ADAM22	-187,-372881
chr16:21222182-21223046	chr16	+	21222263	21222921	True	NM_145865,NM_003460	chr16,chr16	+,-	ANKS4B,ZP2	22094,-3
chr5:96516394-96517287	chr5	+	96516422	96517306	True	NM_001159749,NM_018343,NM_175920	chr5,chr5,chr5	-,-,+	RIOK2,RIOK2,LNPEP	1756,1756,-222317
chr2:31437857-31438604	chr2	+	31437874	31438648	True	NM_014600,NM_001145122	chr2,chr2	+,-	EHD3,CAPN14	18231,1813
chr12:133069078-133069724	chr12	+	133069111	133069584	True	NM_001142641,NM_001195520	chr12,chr12	+,-	FBRSL1,LOC645277	-2005,117510
chr19:915552-916113	chr19	+	915595	915755	True	NM_138774,NM_032551	chr19,chr19	-,+	C19orf22,KISS1R	-2370,1586
chrX:135232536-135233313	chrX	+	135232561	135233246	True	NM_001173517,NM_001159700,NR_027621,NM_001449,NM_001159703,NM_001159702	chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,+	MAP7D3,FHL1,FHL1,FHL1,FHL1,FHL1	100543,-1875,-3751,-3053,-3053,-3053
chr1:240255876-240256136	chr1	+	240255920	240256008	True	NM_022469,NM_020066	chr1,chr1	-,+	GREM2,FMN2	519504,-786
chr1:202163685-202164748	chr1	+	202163987	202164711	True	NR_037664,NM_021636,NM_001017403	chr1,chr1,chr1	-,+,+	PTPN7,LGR6,LGR6	-33271,8193,-920
chr9:17142153-17143783	chr9	+	17142548	17143751	True	NM_017637,NM_001114395,NM_017738	chr9,chr9,chr9	-,+,+	BNC2,CNTLN,CNTLN	-271762,-7569,-7569
chr11:2482953-2483643	chr11	+	2483004	2483690	True	NM_181798,NM_014555	chr11,chr11	+,-	KCNQ1,TRPM5	-371,-38729
chr9:79008416-79008636	chr9	+	79008435	79008681	True	NM_018339,NR_026890	chr9,chr9	-,+	RFK,RPSAP9	813,4833
chr1:45241741-45242272	chr1	+	45241860	45242256	True	NR_001456,NR_001457,NM_153274,NR_000024,NR_000015,NM_001012	chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,+,+,+	SNORD38A,SNORD38B,BEST4,SNORD46,SNORD55,RPS8	1257,1805,11220,-25,-374,-665
chr12:122358595-122359994	chr12	+	122359089	122359676	True	NM_001178003,NM_144668,NM_001171993	chr12,chr12,chr12	+,+,-	WDR66,WDR66,HPD	-2684,-2667,-32572
chr3:182968297-182968498	chr3	+	182968397	182968469	True	NM_032047,NM_014398	chr3,chr3	+,-	B3GNT5,LAMP3	2562,-87730
chr19:12723146-12723930	chr19	+	12723147	12723883	True	NM_153358,NM_020714	chr19,chr19	+,-	ZNF791,ZNF490	-1471,-1524
chr6:33241780-33243389	chr6_qbl_hap6	+	4475617	4475677	False	NM_003782,NM_022551,NM_022553	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	+,+,-	B3GALT4,RPS18,VPS52	1478,-3580,-3719
chr6:33241780-33243389	chr6_mcf_hap5	+	4717152	4717212	False	NM_003782,NM_022551,NM_022553	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	+,+,-	B3GALT4,RPS18,VPS52	1478,-3581,-3720
chr6:33241780-33243389	chr6_cox_hap2	+	4687188	4687248	False	NM_003782,NM_022551,NM_022553	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,+,-	B3GALT4,RPS18,VPS52	1478,-3577,-3716
chr6:33241780-33243389	chr6	+	33243378	33243438	True	NM_003782,NM_022551,NM_022553	chr6,chr6,chr6	+,+,-	B3GALT4,RPS18,VPS52	1478,-3577,-3716
chr6:33241780-33243389	chr6_dbb_hap3	+	4524700	4524760	False	NM_003782,NM_022551,NM_022553	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	+,+,-	B3GALT4,RPS18,VPS52	1478,-3577,-3716
chr5:755948-756195	chr5	+	756084	756244	True	NM_001166260,NM_007030	chr5,chr5	+,-	TRIP13,TPPP	136724,-62574
chr5:755948-756195	chr5	+	848600	848760	False	NM_001166260,NM_024786	chr5,chr5	+,-	TRIP13,ZDHHC11	44208,2391
chr18:55888898-55889906	chr18	+	55888901	55889923	True	NM_001144966,NM_052947	chr18,chr18	+,-	NEDD4L,ALPK2	-185,406316
chr5:53605913-53606127	chr5	+	53605914	53606148	True	NM_006308,NM_019087	chr5,chr5	+,-	HSPB3,ARL15	145282,305
chr6:74019952-74020183	chr6	+	74019977	74020050	True	NM_001017361,NR_027005	chr6,chr6	+,-	C6orf221,C6orf147	52349,89
chr14:74085756-74087072	chr14	+	74085920	74087066	True	NM_001037162,NM_203309	chr14,chr14	+,-	ACOT6,HEATR4	-2425,-60269
chr19:43969627-43969837	chr19	+	43969661	43969813	True	NM_001130011,NM_014400	chr19,chr19	+,-	TEX101,LYPD3	-50677,68
chr11:59278011-59278295	chr11	+	59278045	59278105	True	NM_001004711,NR_036120,NM_001004706	chr11,chr11,chr11	+,-,+	OR4D9,MIR3162,OR4D11	4280,84576,-7051
chr2:173604392-173605467	chr2	+	173604460	173605382	True	NR_026995,NM_007023	chr2,chr2	-,+	LOC91149,RAPGEF4	-3526,-3993
chr19:11040571-11041696	chr19	+	11040594	11041295	True	NM_024029,NM_138358	chr19,chr19	-,+	YIPF2,C19orf52	-1237,-1223
chr7:99695237-99696644	chr7	+	99695332	99696486	True	NM_005916,NR_029831,NR_029498,NM_182776,NR_029510,NM_004722,NM_006833	chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,+,+	MCM7,MIR106B,MIR25,MCM7,MIR93,AP4M1,COPS6	2991,-3635,-4066,1944,-3862,2643,-8801
chr19:55851718-55852184	chr19	+	55851768	55852071	True	NM_144613,NM_032701	chr19,chr19	-,+	COX6B2,SUV420H2	14161,-598
chrX:13680355-13681712	chrX	+	13680466	13681698	True	NM_001011658,NM_152634	chrX,chrX	-,+	TRAPPC2,TCEANC	71106,-9220
chr5:41870854-41872107	chr5	+	41871023	41872131	True	NM_000436,NM_175921	chr5,chr5	-,+	OXCT1,C5orf51	-232,32338
chr1:78477214-78477887	chr1	+	78477460	78477824	True	NM_007034,NM_003902	chr1,chr1	+,-	DNAJB4,FUBP1	-6878,-32683
chr17:76340083-76340433	chr17	+	76340131	76340307	True	NM_003955,NM_024419	chr17,chr17	-,+	SOCS3,PGS1	15901,34427
chr1:24647246-24647894	chr1	+	24647262	24647844	True	NM_198173,NM_021180,NM_001195010,NM_001199013,NM_198174	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	GRHL3,GRHL3,GRHL3,C1orf201,GRHL3	-1502,1685,-1258,92468,-1502
chr1:226595973-226596327	chr1	+	226595974	226596038	True	NM_001618,NM_001003665	chr1,chr1	-,+	PARP1,C1orf95	-173,140462
chr3:57096387-57098188	chr3	+	57096668	57097824	True	NM_181727,NM_001128615	chr3,chr3	+,-	SPATA12,ARHGEF3	-2250,15562
chr1:226130752-226131824	chr1	+	226130956	226131805	True	NM_003240,NM_000120,NM_002107,NM_001172425	chr1,chr1,chr1,chr1	-,+,+,-	LEFTY2,EPHX1,H3F3A,LEFTY2	-1873,-118006,118602,-1873
chr16:33959941-33961314	chr16	+	33959952	33961243	True	NR_027080,NR_002837	chr16,chr16	+,-	LOC283914,UBE2MP1	636543,443569
chr6:88760719-88762501	chr6	+	88761148	88762273	True	NM_033181,NM_030960	chr6,chr6	-,+	CNR1,SPACA1	92846,-3706
chrX:17672050-17672485	chrX	+	17672058	17672374	True	NM_001136024,NR_033348	chrX,chrX	+,-	NHS,RAI2	-18696,206623
chr1:19533589-19533977	chr1	+	19533664	19533813	True	NM_020765,NM_016183	chr1,chr1	-,+	UBR4,MRTO4	2992,44261
chr19:43530636-43531819	chr19	+	43530797	43531503	True	NM_203287,NM_002785,NR_036584,NM_001113410	chr19,chr19,chr19,chr19	-,-,+,-	PSG11,PSG11,LOC100289650,PSG11	-166,-166,-204836,-166
chr12:120431797-120432384	chr12	+	120431914	120432277	True	NM_207311,NM_007174	chr12,chr12	+,-	CCDC64,CIT	-4318,-116822
chr19:22605997-22606532	chr19	+	22606114	22606186	True	NR_033899,NM_001098626	chr19,chr19	+,-	LOC440518,ZNF98	172872,-966
chr16:79830252-79831438	chr16	+	79830428	79831416	True	NM_005360,NM_130897	chr16,chr16	-,+	MAF,DYNLRB2	-195806,743437
chr8:85095431-85096305	chr8	+	85095794	85096261	True	NM_001099670,NM_001100391,NM_173848,NM_001100393,NM_001100392	chr8,chr8,chr8,chr8,chr8	-,+,+,+,+	C8orf59,RALYL,RALYL,RALYL,RALYL	1036433,838,-259,-392,-392
chr9:66363242-66364120	chr9	+	66363547	66364169	True	NR_024443,NR_024496	chr9,chr9	-,+	LOC100133920,LOC442421	666863,130099
chr9:66363242-66364120	chr9	+	44016110	44016732	False	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	-385380,-331276
chr6:105588158-105589201	chr6	+	105588261	105588807	True	NM_007073,NR_037157,NM_001199563,NM_147147	chr6,chr6,chr6,chr6	-,+,-,-	BVES,C6orf112,BVES,BVES	-3718,-2762,-3212,-4040
chr6:84140477-84140681	chr6	+	84140575	84140649	True	NM_002395,NM_001170423	chr6,chr6	-,+	ME1,PRSS35	339,81544
chr19:48457691-48458550	chr19	+	48458083	48458179	True	NR_024219,NR_024220,NR_024221,NR_024217,NR_024216,NR_004437,NM_001128326	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,+,-	SNAR-C5,SNAR-C1,SNAR-C3,SNAR-C2,SNAR-A13,SNAR-A12,BSPH1	759,759,-4585,759,-9959,-9959,37300
chr19:48457691-48458550	chr19	+	48415457	48415553	False	NR_024219,NR_024220,NR_024217,NR_024216,NM_003167,NR_004437,NR_004436,NR_004435	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,-,+,+,+	SNAR-C5,SNAR-C1,SNAR-C2,SNAR-A13,SULT2A1,SNAR-A12,SNAR-A2,SNAR-A1	754,754,754,-4577,-25803,-4577,6132,6132
chr19:48457691-48458550	chr19	+	48452695	48452753	False	NR_024219,NR_024221,NR_024218,NR_024217,NR_024216,NR_024220,NR_004437,NM_001128326	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,+,+,-	SNAR-C5,SNAR-C3,SNAR-C4,SNAR-C2,SNAR-A13,SNAR-C1,SNAR-A12,BSPH1	6185,799,-9952,6185,-4571,6185,-4571,42726
chr19:48457691-48458550	chr19	+	48431225	48431321	False	NR_024219,NR_024220,NR_024223,NR_024224,NR_024225,NR_024226,NR_024227,NR_024228,NR_024229,NR_024215,NR_024214,NR_024217,NM_003167,NR_004436,NR_004435,NR_024242	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,+,+,+,+,+,+,+,-,+,+,+	SNAR-C5,SNAR-C1,SNAR-A5,SNAR-A7,SNAR-A11,SNAR-A9,SNAR-A6,SNAR-A8,SNAR-A10,SNAR-A4,SNAR-A3,SNAR-C2,SULT2A1,SNAR-A2,SNAR-A1,SNAR-A14	753,753,-4244,-4244,-4244,-4244,-4244,-4244,-4244,-4244,-4244,753,-41571,6116,6116,-4244
chr19:48457691-48458550	chr19	+	48441938	48442034	False	NR_024219,NR_024218,NR_024217,NR_024216,NR_024220,NM_003167,NR_004437,NR_004436,NR_004435	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,-,+,+,+	SNAR-C5,SNAR-C4,SNAR-C2,SNAR-A13,SNAR-C1,SULT2A1,SNAR-A12,SNAR-A2,SNAR-A1	-9918,763,-9918,6144,-9918,-52284,6144,-4555,-4555
chr3:186915973-186916446	chr3	+	186916015	186916441	True	NM_052969,NM_153708	chr3,chr3	-,+	RPL39L,RTP1	-58752,-792
chr3:97513351-97513649	chr3	+	97513462	97513611	True	NM_001042533,NM_177976	chr3,chr3	-,+	MINA,ARL6	177668,-29929
chr1:149905746-149906929	chr1	+	149905888	149906958	True	NM_181873,NM_005850,NM_016074,NM_001145862	chr1,chr1,chr1,chr1	-,-,+,-	MTMR11,SF3B4,BOLA1,MTMR11	1358,-5744,-34784,1883
chr19:40722852-40723103	chr19	+	40722855	40722975	True	NM_002446,NM_152479,NM_024877	chr19,chr19,chr19	+,-,-	MAP3K10,TTC9B,CNTD2	-25255,1381,9672
chrX:133782688-133783018	chrX	+	133782822	133783027	True	NM_021796,NM_001170780	chrX,chrX	-,+	PLAC1,FAM122C	9543,147415
chr16:1274272-1274498	chr16	+	1274336	1274498	True	NM_012467,NM_024164,NM_003294	chr16,chr16,chr16	-,-,+	TPSG1,TPSB2,TPSAB1	806,5737,16179
chr12:49212826-49213625	chr12	+	49213061	49213627	True	NM_000725,NM_020983	chr12,chr12	+,-	CACNB3,ADCY6	-600,-30241
chr18:44561730-44562345	chr18	+	44561872	44562403	True	NM_145653,NM_001100817,NM_016427,NM_031303	chr18,chr18,chr18,chr18	-,-,-,+	TCEB3C,TCEB3CL,TCEB3B,KATNAL2	-5423,-5659,-26,-35136
chr5:170847715-170847950	chr5	+	170847786	170847927	True	NM_003862,NR_037474	chr5,chr5	+,-	FGF18,MIR3912	-1170,-34022
chr1:118483458-118484751	chr1	+	118483502	118484638	True	NM_001135589,NM_006784	chr1,chr1	-,+	GDAP2,WDR3	-11200,-11181
chr14:23837600-23838086	chr14	+	23837697	23838098	True	NM_032459,NM_022789,NM_172314,NM_001037288,NM_138460,NM_005864	chr14,chr14,chr14,chr14,chr14,chr14	-,+,+,+,+,-	EFS,IL25,IL25,CMTM5,CMTM5,EFS	-2855,3971,3919,7918,7918,-2855
chr13:50513233-50514338	chr13	+	50513252	50514131	True	NR_023351,NR_003268,NM_020456,NM_001127482	chr13,chr13,chr13,chr13	-,+,-,-	C13orf1,CTAGE10P,C13orf1,C13orf1	-2627,-48758,-2627,-2627
chr1:173445512-173446248	chr1	+	173445534	173446242	True	NR_037845,NM_004905	chr1,chr1	-,+	LOC100506023,PRDX6	102,243
chr1:153518983-153520784	chr1	+	153519274	153520603	True	NM_002962,NM_002960,NM_019554,NM_002961,NM_006271	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	S100A5,S100A3,S100A4,S100A4,S100A1	-5033,1181,-992,-992,80269
chr19:54466741-54467521	chr19	+	54466853	54467413	True	NM_198481,NM_031895	chr19,chr19	-,+	VSTM1,CACNG8	99844,-614
chr5:72155917-72156830	chr5	+	72156154	72156706	True	NM_153188,NM_152625	chr5,chr5	+,-	TNPO1,ZNF366	-12288,-352905
chr1:16971414-16971619	chr3	-	49726567	49726617	True	NM_022064,NM_020998	chr3,chr3	+,-	RNF123,MST1	372,-371
chr15:74663420-74664445	chr15	+	74663479	74664478	True	NM_001099773,NM_182791,NM_000781	chr15,chr15,chr15	-,+,-	CYP11A1,CCDC33,CYP11A1	-4926,-52637,-3398
chr1:22965628-22966287	chr1	+	22965633	22966195	True	NR_036214,NM_172369,NM_015991,NM_001114101	chr1,chr1,chr1,chr1	-,+,+,+	MIR4253,C1QC,C1QA,C1QC	223580,3922,-2566,3922
chr16:28607768-28608148	chr16	+	28607830	28607900	True	NM_138414,NM_177528,NM_001054	chr16,chr16,chr16	+,-,-	CCDC101,SULT1A2,SULT1A2	-42632,-29,541
chr3:12326562-12327654	chr3	+	12326929	12327436	True	NM_003256,NM_138712,NM_005037,NM_138711	chr3,chr3,chr3,chr3	-,+,+,+	TIMP4,PPARG,PPARG,PPARG	-126078,1912,1912,2999
chr1:24071034-24071246	chr1	+	24071183	24071251	True	NM_003198,NM_001127621	chr1,chr1	+,-	TCEB3,GALE	-1388,54859
chr1:203830733-203830955	chr1	+	203830812	203830888	True	NM_003094,NR_027902	chr1,chr1	+,-	SNRPE,C1orf157	-123,179554
chr17:79601942-79602725	chr17	+	79602397	79602773	True	NM_017921,NM_031945	chr17,chr17	-,+	NPLOC4,TSPAN10	1415,6575
chr18:43656046-43656347	chr18	+	43656118	43656285	True	NM_024430,NM_138443	chr18,chr18	-,+	PSTPIP2,HAUS1	-3868,28012
chrX:44333539-44335461	chrX	+	44333765	44335433	True	NM_022076,NM_173794	chrX,chrX	+,-	DUSP21,FUNDC1	367815,66838
chr8:31498537-31499050	chr8	+	31498546	31499077	True	NM_013962,NM_001015508	chr8,chr8	+,-	NRG1,PURG	-1329,-607315
chr16:10932977-10933305	chr16	+	10933076	10933280	True	NM_000246,NM_001079512	chr16,chr16	+,-	CIITA,FAM18A	37774,-20455
chr8:37619417-37619792	chr8	+	37619546	37619833	True	NR_003671,NM_007198	chr8,chr8	-,+	LOC728024,PROSC	-13982,267
chr9:130184366-130185213	chr9	+	130184576	130185247	True	NM_007135,NR_002449	chr9,chr9	+,-	ZNF79,SNORA65	1405,25720
chrX:152162596-152162920	chrX	+	152162597	152162969	True	NM_001184924,NM_001178115,NM_052926,NM_001103151,NM_001103150	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	PNMA5,ZNF185,PNMA5,PNMA5,PNMA5	-42,-52433,-1836,-1836,-1836
chr4:57458941-57459735	chr4	+	57459111	57459569	True	NM_001145459,NM_206919	chr4,chr4	-,+	HOPX,ARL9	63169,-87793
chr6:42019144-42020401	chr6	+	42019191	42020429	True	NM_138572,NM_001136126,NM_001136017	chr6,chr6,chr6	+,-,-	TAF8,CCND3,CCND3	-991,-2581,-2581
chr8:124429781-124430411	chr8	+	124429817	124430265	True	NM_018024,NM_014109	chr8,chr8	+,-	WDYHV1,ATAD2	-903,-21112
chr6:28410409-28411058	chr6	+	28410410	28410932	True	NM_001509,NM_001012455	chr6,chr6	+,-	GPX5,ZSCAN23	82856,397
chr2:69099701-69100230	chr2	+	69099838	69100235	True	NM_014482,NM_014882	chr2,chr2	-,+	BMP10,ARHGAP25	-1189,-97956
chr9:125666606-125666884	chr9	+	125666607	125666853	True	NM_012197,NM_018835,NM_001100588,NM_006626	chr9,chr9,chr9,chr9	+,-,-,-	RABGAP1,RC3H2,RC3H2,ZBTB6	36434,759,759,8806
chrX:151885344-151885979	chrX	+	151885420	151885952	True	NM_001129826,NM_004909,NM_005361,NM_175742,NM_001129828,NM_175743,NM_153488,NM_001080848	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,+,+,-,+,+,-	CSAG3,CSAG2,MAGEA2,MAGEA2,CSAG3,MAGEA2,MAGEA2B,CSAG2	-7750,-7673,-2352,-2352,-7673,-2352,-87,-7673
chrX:151885344-151885979	chrX	-	151919530	151920062	False	NM_001129826,NM_004909,NM_005361,NM_175742,NM_001129828,NM_175743,NM_153488,NM_001080848	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,-,-,+,-,-,+	CSAG3,CSAG2,MAGEA2,MAGEA2,CSAG3,MAGEA2,MAGEA2B,CSAG2	7748,7671,2352,2352,7671,2352,87,7671
chr17:75084425-75084647	chr17	+	75084436	75084690	True	NM_001204408,NR_036200,NM_001204410,NR_027058,NR_003013	chr17,chr17,chr17,chr17,chr17	+,-,+,+,+	SEC14L1,MIR4316,SEC14L1,C17orf86,SCARNA16	34,308496,544,34,698
chr10:105989130-105990411	chr10	+	105989515	105990426	True	NM_001191003,NM_025145	chr10,chr10	+,-	GSTO1,WDR96	23525,1744
chr3:10154709-10155468	chr3	+	10154807	10155129	True	NM_173472,NM_018462,NM_001164839	chr3,chr3,chr3	-,+,-	C3orf24,C3orf10,C3orf24	-4892,2203,-4892
chr7:100210743-100212251	chr7	+	100210821	100211659	True	NM_003227,NM_001040098,NM_001040097,NM_023948,NM_002319,NM_001040099	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,-,+	TFR2,MOSPD3,MOSPD3,MOSPD3,LRCH4,MOSPD3	27564,-819,-1147,-758,-27045,-758
chr4:25931176-25932620	chr4	+	25931228	25932509	True	NM_001145432,NM_015187	chr4,chr4	+,-	C4orf52,SEL1L3	-15469,-66618
chr3:49450052-49450992	chr3	+	49450166	49450942	True	NR_028435,NM_022171,NM_000481,NM_001164712,NM_001664,NM_001164710,NM_001164711	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-,-	AMT,TCTA,AMT,AMT,RHOA,AMT,AMT	9219,-578,9219,9219,-640,9219,9219
chr15:41521888-41522372	chr15	+	41522042	41522281	True	NM_007236,NM_152596	chr15,chr15	+,-	CHP,EXD1	1155,666
chr14:104183507-104184664	chr14	+	104183561	104184711	True	NM_024071,NM_005432,NM_001198953,NM_001100118,NM_001100119	chr14,chr14,chr14,chr14,chr14	+,-,+,-,-	ZFYVE21,XRCC3,ZFYVE21,XRCC3,XRCC3	-1531,-1738,-1531,-1738,-1738
chr16:88771252-88771946	chr16	+	88771469	88771855	True	NM_001171816,NM_001171815,NM_001012759,NM_178841,NM_001012762	chr16,chr16,chr16,chr16,chr16	-,-,+,-,+	RNF166,RNF166,CTU2,RNF166,CTU2	-1444,995,1035,1024,1035
chr12:48578256-48578515	chr12	+	48578434	48578554	True	NM_001013635,NM_001004134	chr12,chr12	+,-	C12orf68,OR10AD1	-1119,18571
chr11:92085982-92087956	chr11	+	92086131	92087965	True	NM_152313,NM_001008781	chr11,chr11	-,+	SLC36A4,FAT3	843180,-922
chr22:32154778-32155450	chr22	+	32154831	32154894	True	NM_001007188,NM_014662,NM_001136029,NM_173566	chr22,chr22,chr22,chr22	+,+,+,-	DEPDC5,DEPDC5,DEPDC5,PRR14L	-4821,-4821,-4037,-8711
chr20:54984807-54985184	chr20	+	54984807	54985211	True	NM_020356,NM_001164114,NM_001164115,NM_001164116,NM_198437	chr20,chr20,chr20,chr20,chr20	+,+,+,+,-	CASS4,CASS4,CASS4,CASS4,AURKA	2102,2102,2102,1956,-17456
chr1:237207084-237207388	chr1	+	237207083	237207437	True	NM_001035,NM_018072	chr1,chr1	+,-	RYR2,HEATR1	-1435,-439242
chr14:92416660-92417627	chr14	+	92416719	92417326	True	NM_006329,NM_017437	chr14,chr14	-,+	FBLN5,CPSF2	-2673,170971
chr7:853511-853846	chr7	+	853576	853753	True	NM_025154,NM_001164759,NM_001171945,NM_001171944,NM_001171946	chr7,chr7,chr7,chr7,chr7	+,-,+,+,+	SUN1,PRKAR1B,SUN1,SUN1,SUN1	2498,-86263,2498,2498,1440
chr17:64308987-64310287	chr17	+	64309153	64310309	True	NM_002737,NM_000042	chr17,chr17	+,-	PRKCA,APOH	-10279,-83597
chr12:123717818-123718135	chr12	+	123717909	123718149	True	NM_001143905,NM_001194995,NM_022782,NM_152269	chr12,chr12,chr12,chr12	+,+,-,+	C12orf65,C12orf65,MPHOSPH9,C12orf65	141,-10,-11468,-116
chr13:52737728-52738934	chr13	+	52737791	52738641	True	NM_001146099,NM_002498,NR_027415,NM_152720,NM_021645	chr13,chr13,chr13,chr13,chr13	-,-,-,-,+	NEK3,NEK3,NEK3,NEK3,UTP14C	-3795,-3795,-3795,-4121,-139015
chr15:81295044-81295982	chr15	+	81295221	81296021	True	NM_022566,NM_015154	chr15,chr15	+,-	MESDC1,MESDC2	-1977,-13016
chr10:50887800-50888857	chr10	+	50888157	50888900	True	NM_182554,NM_001042427,NM_001143996	chr10,chr10,chr10	+,+,-	C10orf53,C10orf53,OGDHL	-524,-524,81578
chr14:24777526-24778909	chr14	+	24777600	24778850	True	NM_001164692,NM_174913,NM_001136050,NM_019839,NM_138452,NM_001143919,NM_181657,NM_014430	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,+,-,+,-,+,+,-	LTB4R2,C14orf21,DHRS1,LTB4R2,DHRS1,LTB4R,LTB4R,CIDEB	506,-8553,-8561,506,-8934,1854,3462,1776
chr19:17412662-17413076	chr19	+	17412886	17412992	True	NM_024050,NM_024527,NM_023937	chr19,chr19,chr19	+,-,+	DDA1,ABHD8,MRPL34	7344,1340,3484
chr6:11094881-11095137	chr6	+	11094921	11095181	True	NM_001135575,NM_207582	chr6,chr6	+,-	LOC221710,ERVFRDE1	-713,16940
chr4:103793356-103795137	chr4	+	103793515	103794969	True	NM_001008388,NM_181890,NM_181893	chr4,chr4,chr4	+,-,-	CISD2,UBE2D3,UBE2D3	-3437,-3483,-3512
chr7:44621565-44621978	chr7	+	44621665	44621955	True	NM_182547,NM_001003941,NM_019082	chr7,chr7,chr7	-,+,-	TMED4,OGDH,DDX56	-62,24165,-7528
chr17:40731183-40732912	chr17	+	40731353	40732554	True	NM_016556,NM_198205,NM_013290	chr17,chr17,chr17	-,+,-	PSMC3IP,MLX,PSMC3IP	-1606,-12326,-1606
chrX:129117206-129117439	chrX	+	129117276	129117469	True	NM_021946,NM_001421	chrX,chrX	+,-	BCORL1,ELF4	21694,127056
chr20:814970-815202	chr20	+	815135	815199	True	NM_033409,NM_207121,NM_001042353	chr20,chr20,chr20	-,+,+	C20orf54,FAM110A,FAM110A	-65907,1511,-830
chr13:44411954-44412948	chr13	+	44412098	44412947	True	NM_001128303,NM_144974	chr13,chr13	+,-	C13orf31,CCDC122	40472,40930
chr20:45174652-45176392	chr20	+	45175098	45176244	True	NM_030777,NM_080721	chr20,chr20	+,-	SLC2A10,C20orf123	162034,3019
chr6:2634421-2634657	chr6	+	2634443	2634549	True	NM_152554,NM_020135	chr6,chr6	-,+	C6orf195,WRNIP1	799,131116
chr7:27168686-27168931	chr7	+	27168803	27168977	True	NM_002141,NM_153631,NR_002795,NM_030661	chr7,chr7,chr7,chr7	-,-,+,-	HOXA4,HOXA3,HOXA11-AS1,HOXA3	1472,-2164,56049,-9589
chr8:145082440-145082717	chr8	+	145082453	145082703	True	NM_032789,NM_001134374,NM_198572	chr8,chr8,chr8	-,+,+	PARP10,SPATC1,SPATC1	-21818,3878,3878
chr19:47985600-47986053	chr19	+	47985781	47985932	True	NM_015711,NM_007059	chr19,chr19	+,-	GLTSCR1,KPTN	125520,1640
chr7:132937432-132938354	chr7	+	132937570	132938390	True	NM_001037126,NM_021807,NM_017812	chr7,chr7,chr7	+,+,-	EXOC4,EXOC4,CHCHD3	82,82,-170742
chr1:92547915-92548614	chr1	+	92548028	92548399	True	NM_001195684,NM_183242	chr1,chr1	-,+	TGFBR3,BTBD8	-176469,-2223
chr21:30669468-30670186	chr21	+	30669508	30670171	True	NM_206866,NR_027655,NM_001186,NM_006585	chr21,chr21,chr21,chr21	+,+,+,-	BACH1,BACH1,BACH1,CCT8	1565,7388,1048,-223498
chr15:63794673-63794903	chr15	+	63794727	63794949	True	NR_034080,NM_006537	chr15,chr15	-,+	LOC100130855,USP3	98127,1860
chr19:50321103-50321605	chr19	+	50321212	50321576	True	NM_025129,NR_033269,NM_001171937,NM_030973	chr19,chr19,chr19,chr19	-,-,-,+	FUZ,FUZ,FUZ,MED25	-4645,-4645,-4645,-41
chr1:206517264-206517686	chr1	+	206517390	206517641	True	NM_001042758,NM_015326,NM_001007544,NM_001170637	chr1,chr1,chr1,chr1	+,+,-,+	SRGAP2,SRGAP2,C1orf186,SRGAP2	-1249,-1249,-228743,-1249
chr1:206517264-206517686	chr1	+	144054822	144054945	False	NM_207418,NR_034178	chr1,chr1	-,+	FAM72D,SRGAP2P2	-141679,-139132
chr11:118212976-118213412	chr11	+	118213184	118213382	True	NM_000073,NM_001040651,NM_000732	chr11,chr11,chr11	+,-,-	CD3G,CD3D,CD3D	1676,127,127
chr7:127032994-127033278	chr7	+	127033066	127033200	True	NM_001662,NM_176814	chr7,chr7	+,-	ARF5,ZNF800	195205,-299
chr17:1664395-1664938	chr17	+	1664491	1664679	True	NM_002615,NR_028505	chr17,chr17	+,-	SERPINF1,C17orf91	579,-44925
chr3:10852047-10853360	chr3	+	10852094	10853326	True	NR_027102,NM_014229	chr3,chr3	-,+	LOC285370,SLC6A11	-46217,4590
chr14:92785869-92786664	chr14	+	92785892	92786680	True	NM_153648,NM_004545,NM_153646,NM_153647	chr14,chr14,chr14,chr14	+,-,+,+	SLC24A4,NDUFB1,SLC24A4,SLC24A4	2244,-197739,3471,2856
chr14:35340999-35342853	chr14	+	35341132	35342735	True	NR_002937,NM_182648,NM_013448	chr14,chr14,chr14	+,-,-	C14orf19,BAZ1A,BAZ1A	66392,2168,2168
chr1:147404866-147406178	chr1	+	147404865	147406217	True	NR_003377,NM_016334	chr1,chr1	-,+	PDZK1P1,GPR89B	78164,-4414
chr1:147404866-147406178	chr1	-	145821347	145822703	False	NM_001097612,NM_001097613,NM_001097616,NR_036541	chr1,chr1,chr1,chr1	-,-,+,-	GPR89A,GPR89A,GPR89C,GPR89A	4454,4454,61164,4454
chr6:7725840-7726150	chr6	+	7725873	7726167	True	NM_001145549,NM_001718	chr6,chr6	-,+	TXNDC5,BMP6	184193,843
chr5:141344976-141345774	chr5	+	141345020	141345464	True	NM_183399,NM_183398,NM_001201365,NM_016580,NM_183401,NM_183400,NM_004290	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,-,+,+,+	RNF14,RNF14,RNF14,PCDH12,RNF14,RNF14,RNF14	937,2986,937,-6393,3247,2986,2986
chrX:140985358-140985692	chrX	+	140985429	140985635	True	NM_005462,NM_145665,NM_177456	chrX,chrX,chrX	+,-,+	MAGEC1,SPANXE,MAGEC3	6006,-198774,-3035
chr8:41504959-41505294	chr8	+	41505062	41505336	True	NM_152568,NM_178819	chr8,chr8	-,+	NKX6-3,AGPAT6	-184,-69406
chr17:67204481-67206369	chr17	+	67204824	67206111	True	NM_080282,NM_002758	chr17,chr17	-,+	ABCA10,MAP2K6	34902,204726
chr4:6383961-6384974	chr4	+	6384029	6384847	True	NM_006005,NM_181876	chr4,chr4	+,-	WFS1,PPP2R2C	-112510,-432
chr3:42544521-42545705	chr3	+	42544632	42545524	True	NM_004624,NM_001201584	chr3,chr3	+,-	VIPR1,SEC22C	-579,78046
chr11:93583691-93584280	chr11	+	93583780	93584307	True	NM_001144871,NM_004268	chr11,chr11	-,+	C11orf90,MED17	-112,-66426
chrX:40139148-40139904	chrX	+	40139147	40139566	True	NM_001123384,NM_005765	chrX,chrX	-,+	BCOR,ATP6AP2	-102565,300649
chr9:131039755-131040272	chr9	+	131039870	131040216	True	NM_001040011,NM_004486	chr9,chr9	+,-	C9orf119,GOLGA2	-1496,-1602
chr7:29604628-29605024	chr7	+	29604752	29605024	True	NR_024278,NM_175887	chr7,chr7	-,+	LOC646762,PRR15	119780,-1376
chr12:58139166-58139381	chr12	+	58139199	58139399	True	NM_005981,NM_001122772,NM_014770,NM_138396,NM_000075	chr12,chr12,chr12,chr12,chr12	+,-,-,+,-	TSPAN31,AGAP2,AGAP2,MARCH9,CDK4	-466,-7170,-3259,9500,6815
chr6:55434447-55436367	chr6	+	55434447	55436336	True	NM_207410,NM_019036,NM_001042406	chr6,chr6,chr6	+,-,-	GFRAL,HMGCLL1,HMGCLL1	-242231,7726,7726
chr5:173171778-173172306	chr5	+	173171777	173172247	True	NM_030627,NM_138369	chr5,chr5	+,-	CPEB4,BOD1	143083,-128111
chrX:153166018-153166390	chrX	+	153166070	153166380	True	NM_001146151,NM_000054,NM_024003,NR_027419	chrX,chrX,chrX,chrX	+,+,-,+	AVPR2,AVPR2,L1CAM,AVPR2	4148,4148,-24671,1604
chr3:197691561-197692318	chr3	+	197692178	197692264	True	NM_001136049,NR_026787,NR_026786,NM_032263,NM_033029	chr3,chr3,chr3,chr3,chr3	+,+,+,-,+	LMLN,LMLN,LMLN,IQCG,LMLN	-5167,-5167,-5167,-5292,-5167
chr15:41244018-41244630	chr15	+	41244056	41244469	True	NM_024111,NM_133639,NM_001142776	chr15,chr15,chr15	+,-,+	CHAC1,RHOV,CHAC1	1166,-77569,1166
chr19:51525280-51525942	chr19	+	51525556	51525888	True	NM_002776,NM_001136032,NM_145888,NM_001077500,NM_001167605,NM_006853,NM_144947,NM_014441	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,+	KLK10,KLK11,KLK10,KLK10,KLK11,KLK11,KLK11,SIGLEC9	-2274,4034,-2602,-2125,5452,5452,5047,102248
chr6:28058971-28060339	chr6	+	28059328	28060375	True	NR_002936,NR_024063	chr6,chr6	-,+	LOC222699,ZSCAN12P1	126382,-468
chrX:130192683-130193138	chrX	+	130192735	130193147	True	NM_144967,NM_182314	chrX,chrX	+,-	ARHGAP36,ENOX2	-570,-155527
chr15:44723453-44724074	chr15	+	44723462	44723868	True	NR_034171,NM_016396	chr15,chr15	-,+	LOC645212,CTDSPL2	105288,-3941
chr19:55573407-55573904	chr19	+	55573495	55573663	True	NR_027382,NM_001145971,NR_027381,NM_138412,NM_133180	chr19,chr19,chr19,chr19,chr19	-,-,-,-,+	RDH13,RDH13,RDH13,RDH13,EPS8L1	972,972,972,7301,13557
chr9:46212237-46212860	chr9	+	46212244	46212465	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2581514,475100
chr9:46212237-46212860	chr9	-	67700739	67700820	False	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	93427,225940
chr9:46212237-46212860	chr9	+	45091322	45091403	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-101145,-1460592
chr9:46212237-46212860	chr9	-	46291815	46291896	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2661085,395669
chr3:38990269-38992198	chr3	+	38990335	38992071	True	NM_020839,NM_014139	chr3,chr3	+,-	WDR48,SCN11A	101435,32
chr7:66046098-66046401	chr7	+	66046201	66046439	True	NM_001167961,NR_002933	chr7,chr7	+,-	KCTD7,LOC493754	47428,-2703
chr1:231379880-231381435	chr1	+	231379957	231381364	True	NM_152379,NM_014236	chr1,chr1	-,+	C1orf131,GNPAT	-3033,-3097
chr19:38399938-38400532	chr19	+	38400142	38400578	True	NM_031951,NM_015073	chr19,chr19	-,+	WDR87,SIPA1L3	-2825,-2331
chr4:57372488-57373774	chr4	+	57372532	57373822	True	NM_002703,NM_206919	chr4,chr4	-,+	PPAT,ARL9	-70730,-1208
chr1:201347324-201348932	chr1	+	201347440	201348885	True	NM_000364,NM_001005337,NM_001001431,NM_001001430,NM_001001432	chr1,chr1,chr1,chr1,chr1	-,+,-,-,-	TNNT2,PKP1,TNNT2,TNNT2,TNNT2	-635,-94911,-635,-635,-635
chr3:47618580-47618905	chr3	+	47618624	47618914	True	NM_006574,NM_015466	chr3,chr3	-,+	CSPG5,PTPN23	1495,-196184
chr12:14822656-14823556	chr12	+	14822705	14823455	True	NM_177925,NM_004963	chr12,chr12	+,-	H2AFJ,GUCY2C	103814,26128
chr1:231556511-231556749	chr1	+	231556510	231556790	True	NM_032018,NM_022051	chr1,chr1	+,-	C1orf124,EGLN1	-82879,4050
chr9:4997368-4998548	chr9	+	4997381	4998594	True	NM_007179,NM_004972	chr9,chr9	-,+	INSL6,JAK2	187074,-12187
chr17:7256578-7256950	chr17	+	7256591	7256977	True	NM_032442,NM_198154,NM_001002914	chr17,chr17,chr17	-,+,+	NEURL4,TMEM95,KCTD11	-23953,1519,-1434
chr16:66610019-66612006	chr16	+	66610487	66612014	True	NM_144673,NM_001199317,NM_004614	chr16,chr16,chr16	+,+,-	CMTM2,CMTM2,TK2	1336,1336,-26172
chrX:44698110-44699755	chrX	+	44698603	44699588	True	NM_022076,NM_173794	chrX,chrX	+,-	DUSP21,FUNDC1	3660,-296382
chr1:27950393-27952167	chr1	+	27950401	27952133	True	NM_001042747,NM_001042729,NM_005248,NM_001143912	chr1,chr1,chr1,chr1	-,-,-,+	FGR,FGR,FGR,FAM76A	668,1023,9644,100356
chr10:43245717-43247508	chr10	+	43246020	43247538	True	NM_014753,NM_006955	chr10,chr10	+,-	BMS1,ZNF33B	30415,-112028
chr5:34209119-34209823	chr5	+	34209124	34209174	True	NM_016568,NR_037951	chr5,chr5	+,-	RXFP3,C1QTNF3-AMACR	-272684,-84491
chr5:34209119-34209823	chr5	-	21379118	21379168	False	NR_027027,NM_004934	chr5,chr5	+,-	GUSBP1,CDH18	80420,-1390765
chr1:160519642-160520478	chr1	+	160519648	160520404	True	NM_020335,NM_052931	chr1,chr1	+,-	VANGL2,SLAMF6	-149335,-26596
chr19:50886269-50887078	chr19	+	50886470	50887083	True	NM_007121,NM_002691,NM_004851	chr19,chr19,chr19	+,+,-	NR1H2,POLD1,NAPSA	-6843,509,-17539
chr15:68569796-68570012	chr15	+	68569808	68570008	True	NM_017882,NM_015322	chr15,chr15	-,+	CLN6,FEM1B	-47728,132
chr4:186348959-186349447	chr4	+	186349256	186349409	True	NR_028085,NM_001114357,NM_018359	chr4,chr4,chr4	-,+,-	UFSP2,C4orf47,UFSP2	-2117,1135,-2117
chr17:5975224-5976330	chr17	+	5975558	5976296	True	NM_001033054,NM_015253	chr17,chr17	-,+	AIPL1,WSCD1	362273,-1675
chr14:21212716-21213607	chr14	+	21212716	21213051	True	NM_198232,NM_006683	chr14,chr14	-,+	RNASE1,EDDM3A	57570,1047
chr17:4047255-4047600	chr17	+	4047276	4047612	True	NM_144611,NM_015113,NR_023346,NR_023347	chr17,chr17,chr17,chr17	+,-,+,+	CYB5D2,ZZEF1,CYB5D2,CYB5D2	-865,-1023,-865,-865
chr5:45654332-45656332	chr5	+	45654332	45655966	True	NM_021072,NM_016640	chr5,chr5	-,+	HCN1,MRPS30	40304,-845356
chr2:88748114-88749803	chr2	+	88748298	88749670	True	NM_152670,NM_001135649	chr2,chr2	+,-	C2orf51,FOXI3	74498,2436
chr12:54422502-54422758	chr12	+	54422506	54422794	True	NM_004503,NM_018953,NR_030753,NR_026658	chr12,chr12,chr12,chr12	+,+,+,-	HOXC6,HOXC5,MIR615,LOC100240735	-363,4037,4939,52863
chr6:133117587-133118223	chr6	+	133117733	133118206	True	NM_052831,NM_001016	chr6,chr6	-,+	C6orf192,RPS12	1591,17501
chr10:23003769-23003970	chr10	+	23003855	23004019	True	NM_005028,NM_173081	chr10,chr10	-,+	PIP4K2A,ARMC3	-352,212934
chr4:46126702-46127295	chr4	+	46126704	46127278	True	NM_173536,NM_000812	chr4,chr4	-,+	GABRG1,GABRB1	-622,906016
chr2:61369860-61370936	chr2	+	61370362	61370975	True	NR_036496,NM_001143960	chr2,chr2	-,+	LOC339803,C2orf74	1185,1267
chr2:228741029-228742162	chr2	+	228741043	228741889	True	NM_025243,NM_178821	chr2,chr2	-,+	SLC19A3,WDR69	-158298,-4779
chr13:48878294-48878553	chr13	+	48878457	48878595	True	NM_000321,NM_001162498	chr13,chr13	+,-	RB1,LPAR6	-625,109108
chr8:27471093-27471977	chr8	+	27471092	27471773	True	NM_001171138,NM_016240,NM_203339,NM_001831	chr8,chr8,chr8,chr8	-,+,-,-	CLU,SCARA3,CLU,CLU	-1824,19803,-2154,604
chrX:138631132-138632996	chrX	+	138631233	138633012	True	NM_000133,NM_001171877	chrX,chrX	+,-	F9,MCF2	-18403,92047
chr19:12943658-12944580	chr19	+	12943790	12944289	True	NM_001080997,NM_014975,NM_031429	chr19,chr19,chr19	-,+,-	RTBDN,MAST1,RTBDN	-2583,4969,1992
chr4:68338942-68340270	chr4	+	68339013	68340154	True	NM_001812,NM_012108	chr4,chr4	-,+	CENPC1,STAP1	71161,84291
chr1:52201105-52201338	chr1	+	52201125	52201388	True	NR_031580,NM_148905,NM_148904,NM_148907	chr1,chr1,chr1,chr1	-,+,+,+	MIR761,OSBPL9,OSBPL9,OSBPL9	100743,-5691,-5691,-5691
chr5:156634482-156636066	chr5	+	156634740	156636016	True	NM_130899,NM_005546	chr5,chr5	-,+	FAM71B,ITK	-41461,-26891
chr10:77551461-77551776	chr10	+	77551505	77551616	True	NM_032772,NM_032024	chr10,chr10	-,+	ZNF503,C10orf11	-389992,-9044
chr13:28565852-28567677	chr13	+	28566093	28566993	True	NM_001105577,NR_002162	chr13,chr13	-,+	PRHOXNB,ATP5EP2	-3319,-46801
chr12:48150792-48151306	chr12	+	48150907	48151287	True	NM_001098532,NM_001098531,NM_006105,NM_017842	chr12,chr12,chr12,chr12	-,-,-,+	RAPGEF3,RAPGEF3,RAPGEF3,SLC48A1	944,1652,1007,15679
chr11:62341687-62341899	chr11	+	62341717	62341895	True	NM_001404,NM_000327	chr11,chr11	-,+	EEF1G,ROM1	-257,38317
chr5:52777993-52778619	chr5	+	52778238	52778432	True	NM_013409,NM_006350,NM_176806	chr5,chr5,chr5	+,+,-	FST,FST,MOCS2	-1695,-1695,-372640
chr18:14745247-14745700	chr18	+	14745376	14745481	True	NM_001145029,NM_001137671	chr18,chr18	+,-	ANKRD30B,POTEC	2757,-201777
chr11:125495611-125495904	chr11	+	125495631	125495945	True	NM_001114122,NM_001274,NM_001114121,NM_001612	chr11,chr11,chr11,chr11	+,+,+,-	CHEK1,CHEK1,CHEK1,ACRV1	-646,366,-646,54898
chrX:153360942-153362098	chrX	+	153361000	153362048	True	NM_020061,NM_001110792,NM_004992	chrX,chrX,chrX	+,-,-	OPN1LW,MECP2,MECP2	47676,1190,1190
chr22:25206017-25206711	chr22	+	25206034	25206737	True	NM_001098498,NM_001008496,NM_001098497,NM_001039948,NM_133454	chr22,chr22,chr22,chr22,chr22	+,-,+,+,+	SGSM1,PIWIL3,SGSM1,SGSM1,SGSM1	-3949,-35351,-3949,-3949,-3949
chr16:22012402-22013690	chr16	+	22012415	22013208	True	NM_173806,NR_033694,NM_001164579	chr16,chr16,chr16	-,-,+	PDZD9,PDZD9,C16orf52	16,16,6247
chr11:129935576-129936007	chr11	+	129935793	129935904	True	NR_024516,NR_024515,NM_001642,NM_001142278,NM_199437,NM_001142277,NM_001142276	chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,-,+,+	APLP2,APLP2,APLP2,APLP2,PRDM10,APLP2,APLP2	3811,3811,3811,3811,-63063,3811,3811
chr5:167719707-167719977	chr5	+	167719756	167719961	True	NM_001161661,NM_015238,NM_001161662,NR_029520	chr5,chr5,chr5,chr5	+,+,+,-	WWC1,WWC1,WWC1,MIR103-1	-742,-742,-742,268067
chr4:99577765-99579185	chr4	+	99577999	99579179	True	NM_005723,NM_015143	chr4,chr4	-,+	TSPAN5,METAP1	683,337608
chr6:28256352-28258166	chr6	+	28256858	28257874	True	NM_032507,NM_001184743,NM_019110	chr6,chr6,chr6	+,+,-	PGBD1,PGBD1,ZKSCAN4	-7598,-7598,-36856
chr5:55029837-55031569	chr5	+	55030180	55031337	True	NM_173514,NM_001142549,NM_001166533,NM_024415	chr5,chr5,chr5,chr5	-,+,+,+	SLC38A9,DDX4,DDX4,DDX4	-22017,2507,2507,2507
chr4:83350218-83350525	chr4	+	83350412	83350506	True	NM_021204,NM_031372,NR_003249	chr4,chr4,chr4	+,-,-	ENOPH1,HNRPDL,HNRPDL	1219,922,922
chr19:12792711-12792923	chr19	+	12792748	12792828	True	NM_013407,NM_032332,NM_001930,NM_013406	chr19,chr19,chr19,chr19	-,+,-,-	DHPS,WDR83,DHPS,DHPS	-71,-12282,-71,-71
chr8:37351709-37352402	chr8	+	37351708	37352278	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	201022,253336
chr6:71135728-71136954	chr6	+	71136142	71136730	True	NM_001851,NM_001162529	chr6,chr6	-,+	COL9A1,FAM135A	-123356,-53
chr22:30721324-30722420	chr22	+	30721468	30722406	True	NM_001204240,NM_031937,NM_001017437	chr22,chr22,chr22	-,-,+	TBC1D10A,TBC1D10A,CCDC157	599,599,30220
chr15:86338328-86340076	chr15	+	86338452	86339604	True	NM_022480,NM_144767	chr15,chr15	-,+	KLHL25,AKAP13	-263,-118236
chr17:57696056-57696653	chr17	+	57696098	57696548	True	NM_004859,NM_016077	chr17,chr17	+,-	CLTC,PTRH2	501,88358
chr20:11899205-11899843	chr20	+	11899224	11899885	True	NM_000214,NM_014962	chr20,chr20	-,+	JAG1,BTBD3	-1244530,-716
chr10:43915661-43915959	chr10	+	43915738	43915912	True	NR_026693,NM_001098204	chr10,chr10	+,-	ZNF487P,HNRNPF	16661,-11042
chr1:95001259-95001576	chr1	+	95001336	95001531	True	NM_001178096,NM_001993,NM_002858	chr1,chr1,chr1	-,-,+	F3,F3,ABCD3	5932,5932,-117454
chr3:48595263-48595657	chr3	+	48595274	48595590	True	NM_033629,NM_004567,NM_033199	chr3,chr3,chr3	+,-,-	TREX1,PFKFB4,UCN2	-88096,-1047,5668
chr6:14817822-14819480	chr6	+	14817981	14819297	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	427229,844042
chr16:30996265-30996548	chr16	+	30996293	30996577	True	NM_001142778,NM_025193,NM_052874,NM_001142777	chr16,chr16,chr16,chr16	+,+,-,+	HSD3B7,HSD3B7,STX1B,HSD3B7	-49,-49,25302,-49
chr4:42400662-42400929	chr4	+	42400664	42400936	True	NM_207406,NM_001080505	chr4,chr4	-,+	BEND4,SHISA3	-245769,-859
chr22:42196352-42196560	chr22	+	42196413	42196533	True	NM_001003796,NM_024821	chr22,chr22	-,+	NHP2L1,CCDC134	-111500,144
chr1:205392198-205393463	chr1	+	205392278	205393355	True	NM_001199051,NM_001199050,NR_037583,NM_001199052,NM_002596,NM_001001552	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,+,-	LEMD1,LEMD1,LEMD1,LEMD1,CDK18,LEMD1	-1064,-1064,-1064,-1064,80328,-1064
chr17:77812264-77812519	chr17	+	77812295	77812513	True	NM_005189,NM_003655	chr17,chr17	+,-	CBX2,CBX4	-60369,750
chr10:98067684-98068220	chr10	+	98067848	98068247	True	NM_001017520,NM_013314,NM_004088	chr10,chr10,chr10	+,-,+	DNTT,BLNK,DNTT	-3826,-36515,-3826
chr1:70821621-70822133	chr1	+	70821644	70822073	True	NM_001031693,NM_030816,NM_001036645,NM_001036646,NR_027404	chr1,chr1,chr1,chr1,chr1	+,-,+,+,+	HHLA3,ANKRD13C,HHLA3,HHLA3,HHLA3	-1204,-1227,-1204,-1204,-1204
chr2:9769057-9770128	chr2	+	9769252	9770133	True	NM_006826,NM_001039613	chr2,chr2	-,+	YWHAQ,IAH1	1023,-154646
chr20:49127857-49129846	chr20	+	49128065	49129883	True	NM_080829,NM_002827	chr20,chr20	-,+	FAM65C,PTPN1	123593,-1226
chr17:79982548-79982776	chr17	+	79982591	79982657	True	NM_005052,NM_144998,NM_144999	chr17,chr17,chr17	+,-,+	RAC3,STRA13,LRRC45	6874,-1818,-1362
chr16:1467652-1468079	chr16	+	1467776	1467854	True	NM_032520,NM_001193388,NM_001037125	chr16,chr16,chr16	+,-,-	GNPTG,UNKL,UNKL	-65927,-3071,-3071
chr1:95393153-95393401	chr1	+	95393251	95393423	True	NM_001839,NR_033998	chr1,chr1	-,+	CNN3,LOC729970	-516,160
chr10:30973196-30973948	chr10	+	30973207	30973993	True	NM_183058,NM_005204	chr10,chr10	-,+	LYZL2,MAP3K8	-54560,-250392
chr3:156392999-156393249	chr3	+	156393011	156393243	True	NM_015508,NM_001184718,NR_027954,NM_001184717	chr3,chr3,chr3,chr3	+,+,-,+	TIPARP,TIPARP,LOC100287227,TIPARP	-857,1209,309,-347
chr3:122788069-122788656	chr3	+	122788133	122788526	True	NR_028444,NM_006810,NM_001031702	chr3,chr3,chr3	+,+,-	PDIA5,PDIA5,SEMA5B	-2328,-2328,-41557
chr10:114136319-114136799	chr10	+	114136461	114136743	True	NR_028134,NM_203380,NM_203379,NM_016234	chr10,chr10,chr10,chr10	-,+,+,+	GUCY2GP,ACSL5,ACSL5,ACSL5	-20108,-1489,-2596,-556
chr17:18281582-18282316	chr17	+	18281588	18281664	True	NM_148918,NM_001145127	chr17,chr17	-,+	SHMT1,EVPLL	-14732,-560
chr10:89420043-89420591	chr10	+	89420112	89420637	True	NM_001015880,NM_004670,NM_032810	chr10,chr10,chr10	+,+,-	PAPSS2,PAPSS2,ATAD1	-687,-687,157330
chr22:25375609-25376329	chr22	+	25375609	25376200	True	NM_001145206,NM_001001663	chr22,chr22	+,-	KIAA1671,TMEM211	47740,-40295
chr17:4701045-4701361	chr17	+	4701050	4701410	True	NM_002798,NM_001014985,NM_002663,NM_182566	chr17,chr17,chr17,chr17	+,+,+,-	PSMB6,GLTPD2,PLD2,VMO1	-1644,-8847,9010,-11321
chr7:191549-191901	chr7	+	191586	191666	True	NM_002607,NM_020223	chr7,chr7	-,+	PDGFA,FAM20C	367865,1302
chr19:4340324-4341174	chr19	+	4340420	4341067	True	NM_001159846,NM_001013841,NM_032868,NM_017720	chr19,chr19,chr19,chr19	+,-,+,-	MPND,STAP2,MPND,STAP2	2456,-1573,2456,-1573
chr1:149823102-149823518	chr1	+	149823169	149823541	True	NM_001040874,NM_001005464,NM_003548,NR_036461,NM_001034077,NM_003516,NM_021059	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,-,-,+,+	HIST2H2AA4,HIST2H3A,HIST2H4A,HIST2H2BC,HIST2H4B,HIST2H2AA3,HIST2H3C	-592,639,9234,-829,9234,-592,639
chr1:149823102-149823518	chr1	-	149813404	149813776	False	NM_001040874,NM_001005464,NM_003548,NR_036461,NM_001034077,NM_003516,NM_021059	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,+,-,+,-,-	HIST2H2AA4,HIST2H3A,HIST2H4A,HIST2H2BC,HIST2H4B,HIST2H2AA3,HIST2H3C	592,-639,-9234,8614,-9234,592,-639
chr3:129831042-129831257	chr3	+	129831190	129831250	True	NM_001136152,NR_024252	chr3,chr3	+,-	ALG1L2,LOC729375	-30567,-914
chr17:79350961-79351294	chr17	+	79350964	79351044	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	22495,-46490
chrX:52658019-52658387	chrX	+	52658154	52658395	True	NR_027250,NM_173358	chrX,chrX	+,-	SSX8,SSX7	-6220,25606
chrX:52658019-52658387	chrX	+	48122057	48122155	False	NM_175723,NM_005635	chrX,chrX	-,+	SSX5,SSX1	-65858,-7311
chr3:81810515-81810763	chr3	+	81810522	81810702	True	NM_001167674,NM_000158	chr3,chr3	+,-	CADM2,GBE1	3197430,298
chr11:44075334-44076298	chr11	+	44075423	44075971	True	NM_001031854,NM_021926	chr11,chr11	+,-	ACCSL,ALX4	-5950,255795
chr8:66545007-66546190	chr8	+	66545175	66546123	True	NM_018120,NM_001145839	chr8,chr8	-,+	ARMC1,MTFR1	379,10764
chr20:57525137-57526212	chr20	+	57525230	57525912	True	NM_001336,NM_198976	chr20,chr20	-,+	CTSZ,TH1L	56447,30398
chr7:150064921-150065423	chr7	+	150065054	150065410	True	NM_002889,NM_013400,NM_014374,NM_001099695,NM_001099696	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	RARRES2,REPIN1,REPIN1,REPIN1,REPIN1	-26291,468,2847,468,468
chr17:46968578-46969316	chr17	+	46968726	46969147	True	NM_005175,NM_001002027,NM_007241	chr17,chr17,chr17	+,+,-	ATP5G1,ATP5G1,SNF8	1000,1000,53068
chr4:84407396-84408083	chr4	+	84407564	84408068	True	NM_139076,NM_016067	chr4,chr4	-,+	FAM175A,MRPS18C	-1274,-30509
chr2:113340624-113341975	chr2	+	113340796	113341908	True	NM_032309,NR_033871	chr2,chr2	+,-	CHCHD5,FLJ42351	127,59899
chr15:68518579-68519670	chr15	+	68518669	68519721	True	NM_017882,NM_015322	chr15,chr15	-,+	CLN6,FEM1B	2415,50419
chr18:71815963-71817935	chr18	+	71816002	71817892	True	NM_014177,NM_152676,NM_001142958	chr18,chr18,chr18	+,-,-	C18orf55,FBXO15,FBXO15	-308,-1003,-902
chr14:29253723-29254439	chr14	+	29253758	29254129	True	NM_002742,NR_026731	chr14,chr14	-,+	PRKD1,C14orf23	1142821,-11915
chr15:45120685-45121175	chr15	+	45120834	45121196	True	NM_182985,NM_001145112	chr15,chr15	+,-	TRIM69,PATL2	-92333,-151748
chr15:45120685-45121175	chr15	-	45364087	45364449	False	NM_207581,NM_014080	chr15,chr15	+,-	DUOXA2,DUOX2	42073,41968
chr4:185652439-185653649	chr4	+	185652603	185653696	True	NM_152683,NM_024629	chr4,chr4	+,-	CCDC111,MLF1IP	-81887,1648
chr18:77903712-77905125	chr18	+	77903715	77904602	True	NM_032510,NR_028339	chr18,chr18	-,+	PARD6G,LOC100130522	100852,1204
chr22:29709339-29709552	chr22	+	29709367	29709549	True	NM_006478,NM_152236,NM_152237,NM_001007279,NM_006477	chr22,chr22,chr22,chr22,chr22	+,+,+,-,-	GAS2L1,GAS2L1,GAS2L1,RASL10A,RASL10A	-6421,-6421,-6421,2249,2249
chr15:83378659-83379033	chr15	+	83378751	83379065	True	NR_034139,NM_004644,NR_003011	chr15,chr15,chr15	-,-,+	LOC338963,AP3B2,SCARNA15	3730,-116,45631
chr3:122135302-122135503	chr3	+	122135398	122135547	True	NM_014367,NM_019069	chr3,chr3	+,-	FAM162A,WDR5B	-32428,-516
chr1:1565747-1566012	chr1	+	1565776	1566008	True	NM_006983,NM_014188,NR_002946	chr1,chr1,chr1	+,-,+	MMP23B,SSU72,MMP23A	1551,-55514,2150
chr9:128004360-128004977	chr9	+	128004427	128004883	True	NM_005347,NM_015635	chr9,chr9	-,+	HSPA5,GAPVD1	-761,19227
chr18:11639980-11640402	chr18	+	11640210	11640264	True	NM_023075,NM_182978	chr18,chr18	-,+	MPPE1,GNAL	268427,48871
chr2:97403112-97403688	chr2	+	97403347	97403723	True	NM_020184,NR_024518,NR_024519,NM_001142292,NR_024521,NR_024520,NM_030805	chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-,-	CNNM4,LMAN2L,LMAN2L,LMAN2L,LMAN2L,LMAN2L,LMAN2L	22915,2140,2140,2140,2140,2140,2140
chr19:11486397-11487433	chr19	+	11486576	11487378	True	NM_000121,NM_175871,NR_033663	chr19,chr19,chr19	-,+,-	EPOR,C19orf39,EPOR	7690,-1244,7690
chr12:64045575-64047066	chr12	+	64045583	64047024	True	NM_014254,NM_173812	chr12,chr12	+,-	TMEM5,DPY19L2	126612,15380
chr7:4640906-4641311	chr7	+	4641041	4641331	True	NM_020144,NM_001037165	chr7,chr7	-,+	PAPOLB,FOXK1	260344,80598
chr19:49543506-49544241	chr19	+	49543626	49544266	True	NR_024244,NM_033378,NR_004383,NM_033377,NM_033043,NM_033183	chr19,chr19,chr19,chr19,chr19,chr19	-,+,+,-,+,-	SNAR-G2,CGB2,SNAR-G1,CGB1,CGB5,CGB8	-8582,-8547,-3400,-3435,2835,8152
chr19:49543506-49544241	chr19	-	49531453	49531709	False	NR_004383,NR_024244,NM_033378,NM_033377,NM_000737	chr19,chr19,chr19,chr19,chr19	+,-,+,-,-	SNAR-G1,SNAR-G2,CGB2,CGB1,CGB	8567,3385,3420,8532,-3860
chr19:49543506-49544241	chr19	-	49566901	49566951	False	NM_031886,NM_006179,NM_033043,NM_033142	chr19,chr19,chr19,chr19	-,-,+,-	KCNA7,NTF4,CGB5,CGB7	9297,223,-19850,-7904
chr19:49543506-49544241	chr19	-	49556401	49556495	False	NM_033183,NM_033043,NM_033142	chr19,chr19,chr19	-,+,-	CGB8,CGB5,CGB7	-4033,-9350,2552
chr1:40599174-40600723	chr1	+	40599191	40599954	True	NM_001142604,NM_012421	chr1,chr1	-,+	PPT1,RLF	-36049,27086
chr16:48399978-48400262	chr16	+	48400069	48400293	True	NM_001006610,NM_031490	chr16,chr16	-,+	SIAH1,LONP2	-285,-121909
chr9:116843946-116844366	chr9	+	116843957	116844320	True	NM_032888,NM_001633	chr9,chr9	+,-	COL27A1,AMBP	73910,-3205
chr17:41159283-41160142	chr17	+	41159907	41159995	True	NM_006373,NM_000988,NM_005533	chr17,chr17,chr17	-,+,+	VAT1,RPL27,IFI35	14522,-9518,-1222
chr3:46612403-46612996	chr3	+	46612803	46612871	True	NM_001174136,NM_024512,NM_003212	chr3,chr3,chr3	+,-,+	TDGF1,LRRC2,TDGF1	3173,-4792,6204
chr11:104963179-104965034	chr11	+	104963224	104964926	True	NM_001007232,NM_001223,NM_033294,NM_033295,NM_001077244,NM_033292,NM_033293	chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,+,-,-	CARD17,CASP1,CASP1,CASP1,GRIA4,CASP1,CASP1	7286,7286,7286,7286,515873,7286,7286
chr9:35793598-35794039	chr9	+	35793772	35794074	True	NM_003995,NM_172312	chr9,chr9	+,-	NPR2,SPAG8	-1417,18235
chr5:112259971-112260788	chr5	+	112260264	112260633	True	NM_005669,NM_152624	chr5,chr5	-,+	REEP5,DCP2	-2233,51799
chr3:47621890-47622485	chr3	+	47622017	47622340	True	NM_006574,NM_015466	chr3,chr3	-,+	CSPG5,PTPN23	-1658,-199577
chr22:50683113-50683336	chr22	+	50683123	50683273	True	NM_032019,NM_031454,NM_001159286,NM_020461	chr22,chr22,chr22,chr22	-,+,-,-	HDAC10,SELO,HDAC10,TUBGCP6	6611,-43766,6611,177
chr6:14856531-14857555	chr6	+	14856699	14857583	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	388943,805756
chr11:47871504-47872778	chr11	+	47871607	47872831	True	NM_015231,NM_001098503	chr11,chr11	-,+	NUP160,PTPRJ	-1550,129278
chr11:9337077-9337657	chr11	+	9337312	9337706	True	NM_006391,NM_001165030,NM_015012,NR_028491	chr11,chr11,chr11,chr11	+,-,-,-	IPO7,TMEM41B,TMEM41B,TMEM41B	68462,-1016,-1016,-1016
chr17:12919547-12920120	chr17	+	12919547	12920149	True	NM_014859,NM_018127,NM_001165962,NM_173717	chr17,chr17,chr17,chr17	+,-,-,-	ARHGAP44,ELAC2,ELAC2,ELAC2	-226769,1282,1282,1282
chr19:52227355-52227994	chr19	+	52227627	52228041	True	NM_001523,NR_024330	chr19,chr19	-,+	HAS1,NCRNA00085	-406,-31085
chr13:39262225-39262795	chr13	+	39262258	39262834	True	NM_207361,NM_001144033	chr13,chr13	+,-	FREM2,STOML3	-1136,302212
chr19:17903695-17904338	chr19	+	17903715	17903841	True	NM_014256,NM_005543	chr19,chr19	+,-	B3GNT3,INSL3	2077,28529
chr8:142518597-142519367	chr8	+	142518668	142519411	True	NM_032611,NM_207414	chr8,chr8	+,-	PTP4A3,FLJ43860	-86714,-1338
chr2:239228571-239228895	chr2	+	239228572	239228902	True	NM_015650,NM_022817,NM_001139490	chr2,chr2,chr2	+,-,+	TRAF3IP1,PER2,TRAF3IP1	282,-31365,282
chr12:56731304-56731575	chr12	+	56731348	56731548	True	NM_001127460,NM_016584,NM_001166279,NM_014871	chr12,chr12,chr12,chr12	-,+,-,-	PAN2,IL23A,PAN2,PAN2	-3815,1114,-3511,-3511
chr9:114288700-114289306	chr9	+	114288758	114289074	True	NM_001007169,NM_001080398,NM_133464	chr9,chr9,chr9	+,-,+	ZNF483,KIAA0368,ZNF483	-1362,-41733,-1362
chr11:3873256-3873531	chr11	+	3873317	3873379	True	NM_001665,NM_003156	chr11,chr11	-,+	RHOG,STIM1	-11104,3553
chr20:4132779-4133805	chr20	+	4132833	4133851	True	NM_175839,NM_000678,NM_175840,NM_175841,NM_175842	chr20,chr20,chr20,chr20,chr20	+,-,+,+,+	SMOX,ADRA1D,SMOX,SMOX,SMOX	-3434,95858,-3434,-3434,-3434
chr10:118994471-118995774	chr10	+	118994628	118995698	True	NR_037436,NM_003054	chr10,chr10	-,+	MIR3663,SLC18A2	-67343,4885
chr7:63591439-63591998	chr7	+	63591558	63591886	True	NM_001159524,NM_178558	chr7,chr7	+,-	ZNF735,ZNF680	75694,431669
chr15:91447565-91448651	chr15	+	91447671	91448575	True	NM_006122,NM_198527	chr15,chr15	+,-	MAN2A2,HDDC3	-302,27249
chr17:45808166-45808881	chr17	+	45808348	45808912	True	NM_145798,NM_013351	chr17,chr17	-,+	OSBPL7,TBX21	90286,1697
chr4:39405662-39406367	chr4	+	39405805	39406233	True	NM_002913,NM_175737	chr4,chr4	-,+	RFC1,KLB	-37804,2239
chr2:176995394-176996258	chr2	+	176995490	176996192	True	NM_014213,NM_001080458,NM_001199747,NM_001199746,NM_019558	chr2,chr2,chr2,chr2,chr2	+,-,+,+,+	HOXD9,EVX2,HOXD8,HOXD8,HOXD8	-8128,-46800,-1119,-1073,-1073
chr21:35901442-35902968	chr21	+	35901612	35902749	True	NM_053277,NM_203418	chr21,chr21	+,-	CLIC6,RCAN1	138938,-2351
chr10:37411185-37412214	chr10	+	37411234	37411827	True	NM_052997,NM_001190489	chr10,chr10	+,-	ANKRD30A,MTRNR2L7	2957,480091
chr12:100975994-100977340	chr12	+	100976234	100977272	True	NM_174942,NM_152317	chr12,chr12	+,-	GAS2L3,DEPDC4	-8798,-315377
chr1:79214873-79215246	chr1	+	79214921	79215285	True	NM_022159,NM_006417	chr1,chr1	-,+	ELTD1,IFI44	257260,-99495
chr1:1361220-1361478	chr1	+	1361219	1361515	True	NM_199121,NM_022834,NR_026871,NM_001146685,NM_001145210	chr1,chr1,chr1,chr1,chr1	+,+,-,+,-	VWA1,VWA1,LOC441869,TMEM88B,LOC441869	9387,9387,-4569,-8,-4569
chr20:2781178-2781384	chr20	+	2781237	2781381	True	NM_080739,NM_001184699,NM_019609	chr20,chr20,chr20	+,-,-	C20orf141,CPXM1,CPXM1	14275,-39,-39
chr17:44337819-44338080	chr5	+	140052910	140052972	False	NM_017706,NM_194249	chr5,chr5	+,-	WDR55,DND1	-8589,261
chr17:44337819-44338080	chr17_ctg5_hap1	-	527965	528035	False	NM_001193465,NR_034172	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	KIAA1267,LOC644246	35462,67413
chr17:44337819-44338080	chr17_ctg5_hap1	+	1204895	1204965	False	NR_026901,NR_037772	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LOC644172,CRHR1	-16519,-34442
chr17:44337819-44338080	chr17_ctg5_hap1	+	1424450	1424516	True	NR_002940,NM_016632	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LRRC37A4,ARL17A	56860,89430
chr17:44337819-44338080	chr17	+	44337897	44337963	False	NM_001193465,NM_014834	chr17,chr17	-,+	KIAA1267,LRRC37A	-35157,34533
chr9:103103541-103103891	chr9	+	103103541	103103920	True	NM_001161584,NM_001198807	chr9,chr9	-,+	TEX10,C9orf30	10986,85574
chr17:18763216-18763666	chr17	+	18763648	18763715	True	NM_002767,NM_001039999	chr17,chr17	+,-	PRPSAP2,FAM83G	-2207,144400
chr16:85335142-85335649	chr16	+	85335207	85335539	True	NR_033984,NM_198491	chr16,chr16	+,-	LOC400548,FAM92B	-164502,-189093
chr2:102840391-102842092	chr2	+	102840396	102842131	True	NM_003854,NM_032718	chr2,chr2	+,-	IL1RL2,MFSD9	-37014,511256
chr11:69291148-69291489	chr11	+	69291205	69291477	True	NM_153451,NM_053056	chr11,chr11	-,+	ORAOV1,CCND1	198738,164395
chr19:10763699-10764307	chr19	+	10763863	10764323	True	NM_017620,NM_012218,NM_153464,NM_001137673,NR_024333,NM_004516	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,-,+	ILF3,ILF3,ILF3,ILF3,LOC147727,ILF3	613,613,613,613,275,613
chr4:95127241-95127672	chr4	+	95127241	95127721	True	NM_001128429,NM_020159,NM_001128430,NM_014485	chr4,chr4,chr4,chr4	+,+,+,-	SMARCAD1,SMARCAD1,SMARCAD1,HPGDS	1294,1294,1037,136356
chr18:66464302-66464771	chr18	+	66464306	66464722	True	NM_024781,NM_019022	chr18,chr18	+,-	CCDC102B,TMX3	594,-81953
chr2:26256715-26256971	chr2	+	26256719	26256987	True	NM_002254,NM_016131	chr2,chr2	-,+	KIF3C,RAB10	-51276,-41
chr6:122790676-122791326	chr6	+	122790980	122791247	True	NM_020755,NM_181794	chr6,chr6	-,+	SERINC1,PKIB	1756,1814
chrX:32177839-32178417	chrX	+	32177866	32178279	True	NM_004021,NM_004020,NM_004023,NM_004022,NM_203391,NM_004013	chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,+,-	DMD,DMD,DMD,DMD,GK,DMD	-4280,-4280,-4280,-4280,-1506447,-4280
chr6:135376612-135377511	chr6	+	135376762	135377478	True	NM_001145158,NM_005375,NM_001145207,NM_006620	chr6,chr6,chr6,chr6	-,+,-,-	HBS1L,MYB,HBS1L,HBS1L	-726,124974,-726,-726
chr1:9716179-9716720	chr1	+	9716220	9716707	True	NR_027045,NM_005026	chr1,chr1	-,+	C1orf200,PIK3CD	-1576,-4481
chr14:77732861-77734838	chr14	+	77733158	77734536	True	NM_021257,NR_031661	chr14,chr14	-,+	NGB,MIR1260	3171,-649
chr2:242574889-242575828	chr2	+	242575217	242575743	True	NM_015963,NM_013325,NM_178326	chr2,chr2,chr2	-,+,+	THAP4,ATG4B,ATG4B	1032,1283,1283
chr22:40440369-40440723	chr22	+	40440373	40440733	True	NM_001024843,NM_152512	chr22,chr22	+,-	TNRC6B,ENTHD1	87,-150579
chr6:165523838-165525202	chr6	+	165523939	165525229	True	NM_144980,NR_027284	chr6,chr6	-,+	C6orf118,LOC441177	197934,875809
chr2:32854592-32856039	chr2	+	32854876	32856062	True	NM_017735,NM_021209,NM_001193509	chr2,chr2,chr2	+,-,+	TTC27,NLRC4,TTC27	-1840,-364064,-1840
chr5:148743608-148744547	chr5	+	148743678	148744398	True	NM_024028,NM_014443	chr5,chr5	+,-	PCYOX1L,IL17B	-6159,14490
chr1:26648130-26648502	chr1	+	26648138	26648502	True	NM_145345,NM_001803	chr1,chr1	-,+	UBXN11,CD52	-3382,-3778
chr4:25013975-25015720	chr4	+	25014051	25015759	True	NR_037934,NM_018176	chr4,chr4	+,-	LOC285540,LGI2	146534,16705
chr12:121340774-121341102	chr12	+	121340799	121340969	True	NM_139015,NM_000545	chr12,chr12	-,+	SPPL3,HNF1A	1232,75579
chr20:58295400-58297141	chr20	+	58295538	58296851	True	NM_014258,NM_183246,NM_183244	chr20,chr20,chr20	-,+,+	SYCP2,PHACTR3,PHACTR3	210409,-30,-30
chr11:57311600-57312400	chr11	+	57311888	57312282	True	NM_012456,NM_001105565	chr11,chr11	-,+	TIMM10,SMTNL1	-13656,-1825
chr4:3076535-3076778	chr4	+	3076546	3076826	True	NM_002111,NM_003703	chr4,chr4	+,-	HTT,NOP14	-189,-111428
chr19:17001098-17001351	chr19	+	17001124	17001334	True	NM_003950,NM_015692	chr19,chr19	+,-	F2RL3,CPAMD8	-1349,136341
chr12:54687556-54688771	chr12	+	54687676	54688714	True	NM_001136023,NM_006163,NR_002944	chr12,chr12,chr12	-,-,+	NFE2,NFE2,HNRNPA1P10	6127,880,-13201
chr17:35306664-35307766	chr17	+	35306692	35307662	True	NM_012138,NM_198837	chr17,chr17	+,-	AATF,ACACA	-568,349080
chr5:5140107-5140452	chr5	+	5140133	5140235	True	NM_139056,NR_028351	chr5,chr5	+,-	ADAMTS16,FLJ33360	207,1197220
chr2:38892777-38893550	chr2	+	38892873	38893589	True	NM_138801,NM_138394	chr2,chr2	+,-	GALM,HNRPLL	-2,-62695
chr8:144418379-144419969	chr8	+	144418466	144419980	True	NM_052963,NM_052924	chr8,chr8	-,+	TOP1MT,RHPN1	-1416,31044
chr22:22222321-22222762	chr22	+	22222337	22222645	True	NM_148176,NM_002745,NM_138957	chr22,chr22,chr22	+,-,-	PPIL2,MAPK1,MAPK1	-202115,-367,-367
chr4:68552844-68553746	chr4	+	68553120	68553795	True	NR_015439,NM_018227	chr4,chr4	+,-	LOC550112,UBA6	13200,13144
chr1:54386565-54387989	chr1	+	54386866	54387613	True	NM_052940,NM_016126	chr1,chr1	+,-	LRRC42,HSPB11	24423,23738
chr1:179200310-179201526	chr1	+	179200477	179201446	True	NM_001168238,NM_001168237,NM_001168236,NM_007314,NM_001136001,NM_003101	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,+	ABL2,ABL2,ABL2,ABL2,ABL2,SOAT1	-1658,-1658,-1658,-1658,-1658,61570
chr5:125800178-125801544	chr5	+	125800213	125801473	True	NM_001146322,NM_001182	chr5,chr5	+,-	GRAMD3,ALDH7A1	226,129659
chr3:75826560-75826770	chr3	+	75826656	75826772	True	NR_036235,NM_001128223	chr3,chr3	+,-	MIR4273,ZNF717	-39276,7537
chr1:172509367-172510601	chr1	+	172509478	172510645	True	NM_016227,NM_153747,NM_014283	chr1,chr1,chr1	+,-,+	C1orf9,PIGC,C1orf9	-7220,-96248,-7277
chr1:8882479-8883452	chr1	+	8882679	8883420	True	NM_001215,NM_001042681,NM_012102	chr1,chr1,chr1	+,-,-	CA6,RERE,RERE	122501,-4980,-4980
chr12:50027301-50028192	chr12	+	50027309	50028193	True	NM_012272,NM_001031698,NM_032130	chr12,chr12,chr12	+,+,-	PRPF40B,PRPF40B,FAM186B	-9957,-3033,-27876
chr10:6359556-6360062	chr10	+	6359601	6360099	True	NM_004566,NM_000417	chr10,chr10	+,-	PFKFB3,IL2RA	-114822,-255268
chr21:26933660-26934271	chr21	+	26933687	26934141	True	NR_024092,NR_001458	chr21,chr21	-,+	C21orf71,MIR155HG	21445,315
chr19:15127292-15128726	chr19	+	15127584	15128704	True	NM_173482,NM_005071	chr19,chr19	+,-	CCDC105,SLC1A6	-6098,-43854
chr17:27278556-27279355	chr17	+	27278673	27279332	True	NM_020889,NM_016518,NM_001033561	chr17,chr17,chr17	-,+,-	PHF12,PIPOX,PHF12	-165,90585,-165
chr15:74726455-74728131	chr15	+	74726569	74728161	True	NM_001146029,NM_006465,NM_001146030,NM_003612	chr15,chr15,chr15,chr15	-,+,-,-	SEMA7A,ARID3B,SEMA7A,SEMA7A	-270,105386,-568,-270
chr9:74386189-74386617	chr9	+	74386355	74386485	True	NM_001135820,NM_013390,NM_182505	chr9,chr9,chr9	-,-,+	TMEM2,TMEM2,C9orf85	-2555,-2555,139937
chr2:10445124-10445571	chr2	+	10445124	10445569	True	NM_134421,NM_002149,NR_036222	chr2,chr2,chr2	+,+,-	HPCAL1,HPCAL1,MIR4261	-1349,-2135,-112327
chr9:131800725-131801683	chr9	+	131800871	131801461	True	NM_020145,NM_032809	chr9,chr9	-,+	SH3GLB2,FAM73B	-10292,-1676
chr1:215748450-215749570	chr1	+	215748731	215749333	True	NM_206933,NM_016121	chr1,chr1	-,+	USH2A,KCTD3	847457,-8058
chr5:150600000-150601219	chr5	+	150600024	150601125	True	NM_000405,NM_015621	chr5,chr5	+,-	GM2A,CCDC69	31487,2580
chr15:91496230-91496478	chr15	+	91496235	91496461	True	NM_033544,NM_001017919,NM_198527	chr15,chr15,chr15	+,+,-	RCCD1,RCCD1,HDDC3	1644,1644,-20461
chr1:110015535-110016074	chr1	+	110015554	110016028	True	NM_001040709,NM_020703	chr1,chr1	+,-	SYPL2,AMIGO1	-6508,36358
chr22:46544556-46544947	chr22	+	46544577	46544966	True	NM_018280,NM_001001928,NM_005036	chr22,chr22,chr22	-,+,+	C22orf26,PPARA,PPARA	-94553,1532,1532
chr17:71228124-71228375	chr17	+	71228218	71228390	True	NM_032837,NM_001100621,NM_001100622,NM_001098832,NM_017941	chr17,chr17,chr17,chr17,chr17	-,+,+,-,+	FAM104A,C17orf80,C17orf80,FAM104A,C17orf80	193,385,385,193,385
chr17:34207504-34208644	chr17	+	34207676	34208674	True	NM_002985,NM_003487	chr17,chr17	-,+	CCL5,TAF15	-299,-71240
chr22:21997564-21998838	chr22	+	21997671	21998619	True	NR_029845,NR_030622,NM_001017964,NM_022044	chr22,chr22,chr22,chr22	+,+,-,+	MIR130B,MIR301B,YDJC,SDF2L1	8973,8650,-13331,-1180
chr4:74601466-74603241	chr4	+	74601971	74603062	True	NM_000584,NM_201431	chr4,chr4	+,-	IL8,RASSF6	3160,-115631
chr14:24808922-24809176	chr14	+	24808967	24809225	True	NM_139247,NM_181657,NM_006871,NM_001198568,NM_001198592	chr14,chr14,chr14,chr14,chr14	-,+,-,-,-	ADCY4,LTB4R,RIPK3,ADCY4,ADCY4	-4690,-26705,67,-4690,-4690
chr21:40141490-40141698	chr21	+	40141493	40141577	True	NM_005239,NR_027066,NR_027065	chr21,chr21,chr21	+,-,-	ETS2,NCRNA00114,NCRNA00114	36271,-595,3874
chr2:37574589-37575653	chr2	+	37574768	37575671	True	NM_012413,NM_005813	chr2,chr2	+,-	QPCT,PRKD3	-3073,-30546
chr19:19322846-19323095	chr19	+	19322892	19322968	True	NM_176880,NM_004386	chr19,chr19	-,+	NR2C2AP,NCAN	-8654,-161
chr7:43970645-43971202	chr7	+	43971055	43971197	True	NM_001077664,NM_015983	chr7,chr7	-,+	URGCP,UBE2D4	-5059,-5073
chr19:854371-855284	chr19	+	854440	854520	True	NM_001972,NM_001928,NM_024888	chr19,chr19,chr19	+,+,-	ELANE,CFD,LPPR3	-2200,5144,-32488
chr1:13007587-13008746	chr1	+	13008195	13008296	True	NM_001100631,NM_001010889	chr1,chr1	+,-	PRAMEF22,PRAMEF6	27246,-789
chr1:13007587-13008746	chr1	-	13358942	13358997	False	NM_001013692,NM_001010889,NM_001013407	chr1,chr1,chr1	-,+,+	PRAMEF3,PRAMEF6,PRAMEF5	-27250,835,821
chr1:13007587-13008746	chr1	+	13118568	13118958	False	NM_001100631,NM_001013407	chr1,chr1	+,-	PRAMEF22,PRAMEF5	-83415,-817
chr1:24116483-24117396	chr1	+	24116743	24117397	True	NM_001008216,NM_000403,NM_001127621,NM_007260	chr1,chr1,chr1,chr1	-,-,-,+	GALE,GALE,GALE,LYPLA2	9947,9687,8713,248
chr22:20396959-20397998	chr22	+	20397129	20397949	True	NR_003563,NR_026919	chr22,chr22	-,+	PI4KAP1,LOC150197	796,-203325
chr22:20396959-20397998	chr22	+	21841105	21841925	False	NM_015094,NR_003700	chr22,chr22	+,-	HIC2,PI4KAP2	-69463,29905
chr22:20396959-20397998	chr22	+	21087275	21088095	False	NM_002650,NR_026815	chr22,chr22	-,+	PI4KA,TMEM191A	910,-31924
chr11:126152503-126152731	chr11	+	126152540	126152627	True	NM_148910,NM_003139,NM_001039661	chr11,chr11,chr11	+,-,+	TIRAP,SRPR,TIRAP	354,-13663,354
chr5:87982572-87983379	chr5	+	87982573	87983420	True	NR_024383,NM_022650,NR_015436	chr5,chr5,chr5	-,+,-	LOC645323,RASA1,LOC645323	-8311,-1417862,-1953
chr9:34623528-34623774	chr9	+	34623569	34623715	True	NM_000155,NM_001017363,NM_024348,NM_007234	chr9,chr9,chr9,chr9	+,-,-,-	GALT,ARID3C,DCTN3,DCTN3	22919,4346,-3073,-3073
chr15:25082809-25083163	chr15	+	25082819	25082882	True	NM_130838,NM_022808	chr15,chr15	-,+	UBE3A,SNRPN	567822,-14080
chr6:116938080-116938368	chr6	+	116938087	116938368	True	NM_145062,NM_001161664,NM_001010892	chr6,chr6,chr6	-,+,+	ZUFSP,RSPH4A,RSPH4A	51662,-496,-496
chr1:16329038-16329830	chr1	+	16329047	16329274	True	NM_014424,NM_178840	chr1,chr1	-,+	HSPB7,C1orf64	16068,1456
chr20:61003351-61003874	chr20	+	61003370	61003862	True	NM_001024,NM_080833	chr20,chr20	+,-	RPS21,C20orf151	-41300,-741
chr7:29186939-29188899	chr7	+	29187075	29188796	True	NM_031311,NM_004067,NM_019029	chr7,chr7,chr7	-,+,-	CPVL,CHN2,CPVL	-922,45324,-922
chr3:193266085-193266456	chr3	+	193266203	193266496	True	NM_032279,NM_015560	chr3,chr3	-,+	ATP13A4,OPA1	6251,44436
chr16:28505485-28505824	chr16	+	28505551	28505797	True	NM_001042432,NM_018690,NM_000086	chr16,chr16,chr16	-,+,-	CLN3,APOBR,CLN3	-1928,195,-2148
chr10:82169166-82170552	chr10	+	82169342	82170548	True	NR_024572,NM_032333,NM_138812	chr10,chr10,chr10	+,+,-	C10orf58,C10orf58,DYDC1	3042,-1151,-52842
chr4:128652145-128652718	chr4	+	128652167	128652469	True	NM_152778,NM_031291	chr4,chr4	-,+	MFSD8,SLC25A31	234720,-663
chr19:34397574-34397785	chr19	+	34397624	34397762	True	NM_001166057,NM_024076	chr19,chr19	-,+	PEPD,KCTD15	-384825,-109924
chr18:32560200-32562140	chr18	+	32560335	32561769	True	NM_001143827,NM_001143826,NM_001112734	chr18,chr18,chr18	+,+,-	MAPRE2,MAPRE2,ZSCAN30	-2189,-3505,308477
chr2:220036892-220037396	chr2	+	220036955	220037367	True	NM_024293,NM_001144889,NM_001144890,NM_015680,NM_144712	chr2,chr2,chr2,chr2,chr2	+,-,-,-,-	FAM134A,SLC23A3,SLC23A3,CNPPD1,SLC23A3	5571,-2138,-2138,4385,-2138
chr15:66789462-66790057	chr15	+	66789541	66790085	True	NM_006049,NM_000968,NR_003105,NR_002440,NR_002441,NR_002442,NR_002443,NM_017975	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,+,-,-,-,-,+	SNAPC5,RPL4,ZWILCH,SNORD16,SNORD18A,SNORD18B,SNORD18C,ZWILCH	111,7149,7345,5213,5617,4394,3621,7345
chr3:122951859-122953087	chr3	+	122951990	122953076	True	NM_012430,NM_001199642	chr3,chr3	+,-	SEC22A,ADCY5	-31281,182172
chr1:179560144-179560698	chr1	+	179560200	179560644	True	NM_001199091,NM_001199085,NM_173533,NM_014625,NM_001199089	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	TDRD5,TDRD5,TDRD5,NPHS2,TDRD5	103,112,112,-15116,344
chr20:524073-524447	chr20	+	524198	524434	True	NM_031229,NM_177560,NM_001895,NM_177559	chr20,chr20,chr20,chr20	+,-,-,-	RBCK1,CSNK2A1,CSNK2A1,CSNK2A1	-135540,98,98,98
chr20:62678974-62679273	chr20	+	62678985	62679243	True	NM_198723,NM_018419	chr20,chr20	+,-	TCEA2,SOX18	9195,1786
chr17:18279012-18279520	chr17	+	18279368	18279536	True	NM_148918,NM_001145127	chr17,chr17	-,+	SHMT1,EVPLL	-12512,1542
chr12:10365803-10366437	chr12	+	10365915	10366433	True	NM_031412,NM_002543	chr12,chr12	+,-	GABARAPL1,OLR1	-477,-41125
chr11:76433380-76433966	chr11	+	76433456	76433808	True	NM_015516,NR_024042	chr11,chr11	+,-	TSKU,GUCY2E	60476,-623
chr5:146260849-146261762	chr5	+	146260887	146261534	True	NM_001127381,NM_145001,NM_181675,NM_004576	chr5,chr5,chr5,chr5	-,+,-,-	PPP2R2B,STK32A,PPP2R2B,PPP2R2B	-2430,353044,-2560,-2728
chr7:2395500-2395967	chr7	+	2395636	2395923	True	NM_013321,NM_001037283,NM_003751	chr7,chr7,chr7	-,+,+	SNX8,EIF3B,EIF3B	-41537,-1222,-1222
chr10:92978548-92980283	chr10	+	92978975	92980230	True	NR_002779,NM_032373	chr10,chr10	-,+	NUDT9P1,PCGF5	-66138,138
chr13:31506002-31506590	chr13	+	31506002	31506618	True	NM_152325,NM_006644	chr13,chr13	+,-	C13orf26,HSPH1	215,229549
chr16:10933961-10934606	chr16	+	10934176	10934622	True	NM_000246,NM_001079512	chr16,chr16	+,-	CIITA,FAM18A	36432,-21555
chr10:3213077-3213288	chr10	+	3213166	3213342	True	NM_002627,NM_014889	chr10,chr10	+,-	PFKP,PITRM1	-103465,1717
chr19:51295736-51296319	chr19	+	51295754	51296276	True	NR_003069,NR_003068,NM_033068,NR_003067	chr19,chr19,chr19,chr19	-,-,+,-	SNORD88C,SNORD88B,ACPT,SNORD88A	9452,6156,-2133,6566
chr17:45921021-45922055	chr17	+	45921334	45922049	True	NM_001145023,NM_138355,NM_033413	chr17,chr17,chr17	-,-,+	SCRN2,SCRN2,LRRC46	-2635,-2635,-12392
chr16:58033625-58034006	chr16	+	58033671	58034013	True	NM_001195302,NM_001204911,NM_020807,NM_024598	chr16,chr16,chr16,chr16	+,+,-,+	C16orf57,C16orf57,ZNF319,C16orf57	1263,1263,31,1263
chr14:70345177-70345550	chr14	+	70345209	70345551	True	NM_001034852,NM_003049,NM_022137	chr14,chr14,chr14	+,-,+	SMOC1,SLC10A1,SMOC1	562,-81203,562
chr17:21026636-21027119	chr17	+	21026637	21026901	True	NM_015276,NM_015510	chr17,chr17	-,+	USP22,DHRS7B	-80285,3356
chr17:56270886-56271129	chr17	+	56271014	56271178	True	NM_000502,NM_017777	chr17,chr17	+,-	EPX,MKS1	-976,25538
chr4:47947186-47949097	chr4	+	47947270	47949143	True	NM_152995,NM_207330	chr4,chr4	-,+	NFXL1,NIPAL1	-30637,69647
chr12:10825830-10826585	chr12	+	10826014	10826412	True	NM_005042,NM_018423	chr12,chr12	+,-	PRH2,STYK1	255421,531
chr2:232394131-232394835	chr2	+	232394252	232394714	True	NM_006056,NM_152614	chr2,chr2	-,+	NMUR1,C2orf57	518,62860
chr10:85997013-85997217	chr10	+	85997027	85997147	True	NM_001012720,NM_001012722,NM_002921,NM_015613	chr10,chr10,chr10,chr10	+,+,+,-	RGR,RGR,RGR,LRIT1	7661,7661,7661,4120
chr7:29722474-29724225	chr7	+	29722989	29724180	True	NR_036482,NR_024278,NR_036554,NR_027347	chr7,chr7,chr7,chr7	+,-,+,-	DPY19L2P3,LOC646762,DPY19L2P3,LOC100271874	589,624,1507,1307
chr7:29722474-29724225	chr7	-	32768856	32769675	False	NR_030320,NR_003502,NR_036680	chr7,chr7,chr7	+,+,-	MIR550A2,LOC441208,DPY19L1P1	2917,-1345,-10076
chr10:43571951-43572165	chr10	+	43571962	43572212	True	NM_020975,NM_020630,NM_145313	chr10,chr10,chr10	+,+,-	RET,RET,RASGEF1A	304,304,190205
chr11:65324766-65325046	chr11	+	65324770	65324922	True	NM_001130144,NM_021070,NM_001164266,NM_006396	chr11,chr11,chr11,chr11	-,-,-,+	LTBP3,LTBP3,LTBP3,SSSCA1	827,827,827,13020
chr11:3691148-3692216	chr11	+	3691356	3692178	True	NM_004314,NM_020402	chr11,chr11	+,-	ART1,CHRNA10	-25046,486
chr1:16481307-16481535	chr1	+	16481362	16481434	True	NM_001165945,NM_004431	chr1,chr1	+,-	CLCNKB,EPHA2	-106129,1198
chr20:30599127-30599752	chr20	+	30599433	30599799	True	NM_030815,NM_080625	chr20,chr20	-,+	PDRG1,C20orf160	-59550,-1239
chr8:124041231-124042154	chr8	+	124041360	124042039	True	NM_001145088,NM_001134671	chr8,chr8	+,-	WDR67,DERL1	42880,12666
chr1:172523640-172524077	chr1	+	172523931	172524117	True	NM_016227,NM_153747	chr1,chr1	+,-	C1orf9,PIGC	-21677,-110701
chrY:26505453-26507367	chrY	+	26505758	26507380	True	NR_002195,NR_001526	chrY,chrY	-,+	GOLGA2P3Y,TTTY17A	-144780,124098
chrY:26505453-26507367	chrY	-	27455049	27456671	False	NR_002179,NR_001555	chrY,chrY	-,+	TTTY17C,GOLGA2P2Y	-124129,144786
chr4:70999336-71000253	chr4	+	70999422	71000292	True	NR_033311,NM_001891	chr4,chr4	+,-	CSN1S2BP,CSN2	-152,-172696
chr2:58473498-58475067	chr2	+	58473622	58474655	True	NM_001114636,NM_001130481,NM_018062	chr2,chr2,chr2	-,+,-	FANCL,VRK2,FANCL	-5107,-199831,-5107
chr17:18265067-18265725	chr17	+	18265188	18265554	True	NM_004169,NM_148918,NM_001145127	chr17,chr17,chr17	-,-,+	SHMT1,SHMT1,EVPLL	1358,1358,15524
chr6:35762514-35762833	chr6	+	35762593	35762828	True	NM_182548,NM_001832	chr6,chr6	+,-	LHFPL5,CLPS	10242,2325
chr1:68287514-68289377	chr1	+	68287565	68289395	True	NM_001924,NM_018841	chr1,chr1	+,-	GADD45A,GNG12	-136757,9810
chr19:33794887-33795138	chr19	+	33794947	33795153	True	NR_026887,NM_004364	chr19,chr19	+,-	LOC80054,CEBPA	-1235,-1517
chr17:27069010-27069331	chr17	+	27069015	27069319	True	NM_004295,NM_001160407	chr17,chr17	+,-	TRAF4,TLCD1	1703,-15066
chr20:62200275-62200804	chr20	+	62200279	62200841	True	NM_033405,NM_024059,NM_001037335	chr20,chr20,chr20	-,+,-	PRIC285,C20orf195,PRIC285	-1172,-15957,4801
chr7:131350330-131350538	chr7	+	131350371	131350561	True	NM_005397,NM_013255	chr7,chr7	-,+	PODXL,MKLN1	-108995,-337827
chr1:31199428-31199830	chr1	+	31199452	31199870	True	NR_034182,NM_002379	chr1,chr1	+,-	LOC100129196,MATN1	-7884,-3020
chr4:79863651-79865119	chr4	+	79863824	79865138	True	NM_198892,NM_001040202	chr4,chr4	+,-	BMP2K,PAQR3	-166343,-3242
chr14:55591917-55593379	chr14	+	55592252	55593235	True	NM_002306,NM_001146015,NM_001177388	chr14,chr14,chr14	+,-,+	LGALS3,DLGAP5,LGALS3	2699,65212,2699
chr19:544359-545292	chr19	+	544401	545169	True	NM_005317,NM_182577	chr19,chr19	+,-	GZMM,ODF3L2	-425,-69418
chr10:102739230-102739697	chr10	+	102739398	102739708	True	NM_001163812,NM_001163813,NM_001163814,NM_032112,NM_021830,NR_030339,NM_017893,NM_176794,NM_001203244,NM_176793,NM_176792	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,-,+,+,+,-,+,-,-	C10orf2,C10orf2,C10orf2,MRPL43,C10orf2,MIR608,SEMA4G,MRPL43,SEMA4G,MRPL43,MRPL43	7584,7584,7584,7614,7584,-4707,-7163,7614,-7163,7614,7614
chr10:95365288-95366445	chr10	+	95365389	95366467	True	NM_006744,NM_006204	chr10,chr10	-,+	RBP4,PDE6C	-4396,5877
chr12:133568503-133570200	chr12	+	133569040	133569974	True	NM_019591,NM_001164715	chr12,chr12	+,-	ZNF26,ZNF605	-6042,-36148
chr9:136499479-136499725	chr9	+	136499559	136499725	True	NM_000787,NM_001080515	chr9,chr9	+,-	DBH,FAM163B	1759,-54191
chr7:101465427-101465900	chr7	+	101465445	101465884	True	NM_181552,NM_138403,NM_001913,NM_001202543,NM_001202546,NM_001202544,NM_001202545,NM_181500	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,-,+,+,+,+,+,+	CUX1,MYL10,CUX1,CUX1,CUX1,CUX1,CUX1,CUX1	-4615,-192869,-6313,-6313,-6209,-6313,-6313,-6313
chr19:51645823-51646148	chr19	+	51645828	51646072	True	NM_014385,NM_145232,NM_016543	chr19,chr19,chr19	+,-,+	SIGLEC7,CTU1,SIGLEC7	-321,-34181,-321
chr3:9976535-9977968	chr3	+	9976815	9977922	True	NM_001031717,NM_207351,NM_015513,NM_001077415	chr3,chr3,chr3,chr3	+,-,+,+	CRELD1,PRRT3,CRELD1,CRELD1	-1341,16213,-1342,-1341
chr11:44928715-44929147	chr11	+	44928864	44929148	True	NR_026681,NM_001076787	chr11,chr11	+,-	LOC221122,TP53I11	66304,43510
chr16:700620-701100	chr16	+	700633	701131	True	NM_138418,NM_032366,NM_145294	chr16,chr16,chr16	+,-,+	FAM195A,C16orf13,WDR90	-8835,-14286,-1321
chr15:99642935-99643269	chr15	+	99642945	99643315	True	NM_015286,NM_001167902,NM_145728	chr15,chr15,chr15	+,-,+	SYNM,PGPEP1L,SYNM	1970,-91921,1970
chrX:84499378-84500477	chrX	+	84499457	84500359	True	NM_021998,NM_024921	chrX,chrX	+,-	ZNF711,POF1B	-511,134447
chr1:161068771-161070580	chr1	+	161068774	161070601	True	NM_030916,NR_033386,NM_001007255,NM_152366,NR_033385	chr1,chr1,chr1,chr1,chr1	-,+,+,+,+	PVRL4,KLHDC9,KLHDC9,KLHDC9,KLHDC9	-9389,-674,-644,-644,-674
chr3:186078780-186079073	chr3	+	186078783	186079119	True	NM_016306,NM_001080744,NM_001080745,NM_001346	chr3,chr3,chr3,chr3	+,-,-,-	DNAJB11,DGKG,DGKG,DGKG	209347,954,954,954
chr9:131215404-131215987	chr9	+	131215770	131215848	True	NR_029837,NM_153439,NM_153435,NM_153437,NM_153436,NM_153433,NM_153432,NM_153440,NR_036757,NR_036756,NR_036755,NR_036754	chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,+,+,+,+,+,+,+,+,+,+,+	MIR219-2,ODF2,ODF2,ODF2,ODF2,ODF2,ODF2,ODF2,ODF2,ODF2,ODF2,ODF2	-60777,2436,2436,3337,1585,2830,2436,2830,2436,2436,2436,2436
chr16:69419121-69419435	chr16	+	69419125	69419355	True	NM_030579,NM_005652	chr16,chr16	+,-	CYB5B,TERF2	39142,569
chr7:100208332-100209303	chr7	+	100208535	100208865	True	NM_001040098,NM_001040097,NM_002593,NM_023948,NM_002319,NM_001040099	chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,-,+	MOSPD3,MOSPD3,PCOLCE,MOSPD3,LRCH4,MOSPD3	1187,859,-8716,1248,-24759,1248
chr8:94746994-94747487	chr8	+	94747010	94747503	True	NM_203390,NR_027259	chr8,chr8	-,+	RBM12B,C8orf39	5774,4835
chr6:132713366-132714604	chr6	+	132713561	132714415	True	NM_015529,NM_175057	chr6,chr6	-,+	MOXD1,TAAR9	8300,145011
chr12:107168877-107169756	chr12	+	107168956	107169601	True	NM_001033050,NM_018157	chr12,chr12	-,+	MTERFD3,RIC8B	211379,-608
chr16:34408166-34408801	chr16	+	34408195	34408745	True	NR_027080,NR_002837	chr16,chr16	+,-	LOC283914,UBE2MP1	189041,-3433
chr12:56689227-56689684	chr12	+	56689377	56689465	True	NM_004077,NM_001099337	chr12,chr12	-,+	CS,COQ10A	4760,-28372
chr1:119530213-119530469	chr1	+	119530332	119530404	True	NM_001005783,NM_152380	chr1,chr1	+,-	HAO2,TBX15	380997,1825
chr13:50160103-50160376	chr13	+	50160259	50160407	True	NM_138450,NM_018191	chr13,chr13	+,-	ARL11,RCBTB1	42027,-540
chr4:91229473-91230446	chr4	+	91229590	91230467	True	NM_001146055,NM_207491	chr4,chr4	-,+	SNCA,FAM190A	-470143,-73459
chr1:112530292-112530829	chr1	+	112530343	112530877	True	NM_172198,NM_007204,NM_004980	chr1,chr1,chr1	-,+,-	KCND3,DDX20,KCND3	950,-232204,950
chr8:38855357-38855834	chr8	+	38855441	38855890	True	NM_031940,NM_003816,NM_078473,NR_027638,NR_027639,NM_001024380,NM_001024381,NR_027878	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,+,-,+,+,-,-,+	TM2D2,ADAM9,TM2D2,ADAM9,ADAM9,TM2D2,TM2D2,ADAM9	-1400,-994,-1400,-994,-994,-1400,-1400,-994
chr2:23644208-23646098	chr2	+	23644327	23646061	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	503923,-36081
chr21:35746069-35747557	chr21	+	35746409	35747403	True	NM_001127670,NM_058182	chr21,chr21	-,+	KCNE1,FAM165B	80710,345
chr4:47791243-47791757	chr4	+	47791578	47791763	True	NM_006587,NM_207330	chr4,chr4	-,+	CORIN,NIPAL1	48347,227027
chr2:242046005-242046268	chr2	+	242046122	242046294	True	NR_028049,NM_182501,NM_002712,NR_028051,NR_028050	chr2,chr2,chr2,chr2,chr2	-,-,+,-,-	MTERFD2,MTERFD2,PPP1R7,MTERFD2,MTERFD2	-4375,-4375,43607,-4375,-4375
chr22:46448944-46449160	chr22	+	46448999	46449163	True	NM_018280,NR_027034,NR_027036	chr22,chr22,chr22	-,+,-	C22orf26,LOC150381,LOC100271722	911,562,-8251
chr12:93477646-93478615	chr12	+	93477923	93478597	True	NM_019094,NM_003566	chr12,chr12	+,-	NUDT4,EEA1	293103,-154816
chr5:67547704-67549518	chr5	+	67547965	67549561	True	NM_005582,NM_181523	chr5,chr5	-,+	CD180,PIK3R1	-1055348,-25554
chr17:62050983-62051823	chr17	+	62051064	62051550	True	NM_001164257,NM_000334	chr17,chr17	+,-	C17orf72,SCN4A	24160,-786
chr7:27087052-27087300	chr7	+	27087215	27087310	True	NM_005522,NR_002795	chr7,chr7	-,+	HOXA1,HOXA11-AS1	48366,137716
chrX:70433802-70434404	chrX	+	70433886	70434370	True	NM_000166,NM_001097642,NM_201599	chrX,chrX,chrX	+,+,-	GJB1,GJB1,ZMYM3	8685,691,39718
chr20:31786807-31788457	chr20	+	31786950	31788228	True	NM_080675,NR_026760	chr20,chr20	-,+	SUN5,BASE	-194711,-5590
chr17:40703397-40703881	chr17	+	40703473	40703543	True	NM_000413,NM_013290	chr17,chr17	+,-	HSD17B1,PSMC3IP	440,26254
chr16:78059927-78060457	chr16	+	78060010	78060498	True	NM_005752,NM_199355	chr16,chr16	+,-	CLEC3A,ADAMTS18	-3631,-590999
chr19:8427724-8428253	chr19	+	8427992	8428280	True	NM_139314,NM_001039667,NM_198471	chr19,chr19,chr19	+,+,-	ANGPTL4,ANGPTL4,KANK3	730,730,-19846
chr16:70829973-70831165	chr16	+	70829992	70831198	True	NR_034083,NM_018052	chr16,chr16	+,-	LOC100130894,VAC14	-41080,3915
chr14:24407776-24409647	chr14	+	24407776	24409461	True	NR_024081,NM_021004	chr14,chr14	-,+	C14orf165,DHRS4	-3999,13503
chr19:51380812-51381366	chr19	+	51381007	51381401	True	NR_002948,NM_005551,NM_001002231	chr19,chr19,chr19	-,+,+	KLKP1,KLK2,KLK2	18303,-4369,-4369
chr17:18627330-18627584	chr17	+	18627330	18627439	True	NM_001145045,NM_001037330	chr17,chr17	-,+	ZNF286B,TRIM16L	-41758,-1979
chr17:18627330-18627584	chr17	-	15544241	15544292	False	NM_006382,NM_001130842	chr17,chr17	-,+	CDRT1,ZNF286A	-21223,58598
chr7:26330489-26331374	chr7	+	26330701	26331355	True	NM_031243,NM_013322,NM_001199835,NR_037670	chr7,chr7,chr7,chr7	-,+,+,+	HNRNPA2B1,SNX10,SNX10,SNX10	-90288,159,159,159
chr5:131825103-131825697	chr5	+	131825109	131825709	True	NM_005732,NM_002198	chr5,chr5	+,-	RAD50,IRF1	66906,806
chr9:133811963-133812659	chr9	+	133812057	133812569	True	NM_001145106,NM_032843,NM_006059	chr9,chr9,chr9	-,-,+	FIBCD1,FIBCD1,LAMC3	1936,1720,71934
chr13:28364937-28365381	chr13	+	28365039	28365400	True	NM_153371,NM_145657	chr13,chr13	-,+	LNX2,GSX1	-170319,1379
chr3:17783000-17783473	chr3	+	17783013	17783473	True	NM_014744,NM_001134380,NR_037465	chr3,chr3,chr3	-,-,+	TBC1D5,TBC1D5,MIR3714	-614,817,-808376
chr1:54303237-54303778	chr1	+	54303359	54303629	True	NM_000792,NR_033142,NM_001168551,NM_018087	chr1,chr1,chr1,chr1	+,-,-,-	DIO1,TMEM48,TMEM48,TMEM48	56231,646,646,646
chrX:64770174-64770535	chrX	+	64770258	64770484	True	NM_001010888,NR_033742	chrX,chrX	+,-	ZC3H12B,FKSG43	-61694,1867
chr4:84368866-84369082	chr4	+	84369027	84369092	True	NM_133636,NM_016067	chr4,chr4	-,+	HELQ,MRPS18C	7988,8025
chr8:86131834-86132376	chr8	+	86132009	86132347	True	NM_001099672,NM_001099673,NM_001099670,NM_001099671,NM_198584	chr8,chr8,chr8,chr8,chr8	-,-,-,-,+	C8orf59,C8orf59,C8orf59,C8orf59,CA13	346,346,346,346,25368
chr11:291944-292576	chr11	+	291951	292621	True	NM_001025295,NM_025092	chr11,chr11	-,+	IFITM5,ATHL1	6955,-2864
chr19:49976852-49977238	chr19	+	49977007	49977285	True	NM_001204502,NM_001204503,NM_001459,NM_017916	chr19,chr19,chr19,chr19	+,+,+,-	FLT3LG,FLT3LG,FLT3LG,PIH1D1	180,532,180,-21892
chr5:38414755-38416675	chr5	+	38414950	38416710	True	NM_001127671,NM_182799	chr5,chr5	-,+	LIFR,EGFLAM	140088,-11351
chr12:64215324-64215576	chr12	+	64215328	64215594	True	NM_020762,NM_173812	chr12,chr12	+,-	SRGAP1,DPY19L2	22946,-152974
chr7:99381525-99383482	chr7	+	99381673	99383285	True	NM_001202855,NM_017460,NM_022820	chr7,chr7,chr7	-,-,+	CYP3A4,CYP3A4,CYP3A43	138,138,42350
chr12:125550282-125550500	chr12	+	125550296	125550486	True	NM_032656,NM_023928	chr12,chr12	-,+	DHX37,AACS	-76629,-422
chr3:23989463-23990710	chr3	+	23989734	23990509	True	NM_001145425,NM_005126,NM_020345	chr3,chr3,chr3	+,+,-	NR1D2,NR1D2,NKIRAS1	-2173,-3034,-31197
chr22:42471480-42473211	chr22	+	42471495	42473072	True	NM_033318,NM_001002034,NM_000262	chr22,chr22,chr22	+,+,-	C22orf32,FAM109B,NAGA	2626,-1291,-4649
chr20:34355702-34356108	chr20	+	34355901	34356141	True	NM_184234,NM_016436	chr20,chr20	-,+	RBM39,PHF20	-25708,3781
chrX:101971958-101973639	chrX	+	101971966	101973267	True	NM_030639,NM_001184875,NM_001184874,NM_001184876,NM_001004051,NM_138437,NM_001142528,NM_021992,NM_001142525,NM_001142524,NM_001142527,NM_001142526	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,+,+,-,+,+,+,+	BHLHB9,GPRASP2,GPRASP2,GPRASP2,GPRASP2,GPRASP2,BHLHB9,TMSB15A,BHLHB9,BHLHB9,BHLHB9,BHLHB9	2374,-4916,-4916,-4916,-4916,-4916,2374,-200267,2374,2374,2374,2374
chr11:123512774-123513226	chr11	+	123512814	123513224	True	NM_020716,NM_001040151	chr11,chr11	+,-	GRAMD1B,SCN3B	-116337,12141
chr21:46978381-46979200	chr21	+	46978434	46979231	True	NM_130444,NM_194255	chr21,chr21	+,-	COL18A1,SLC19A1	-103061,-16049
chr7:158652837-158654077	chr7	+	158653203	158654044	True	NM_020728,NM_018051	chr7,chr7	-,+	ESYT2,WDR60	-30884,-3991
chr9:139941188-139941685	chr9	+	139941624	139941685	True	NM_207511,NM_001246,NM_203468,NM_015392	chr9,chr9,chr9,chr9	+,-,-,-	C9orf139,ENTPD2,ENTPD2,NPDC1	-19759,6871,6871,-948
chr16:30199419-30199818	chr16	+	30199503	30199693	True	NR_037608,NR_037609,NM_001014999,NM_007074,NM_001015000,NM_024044,NM_001031827,NR_002454,NM_001039182,NM_178044,NM_001193333	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,+,-,+,-,+,+	SLX1A-SULT1A3,SLX1B-SULT1A4,SLX1A,CORO1A,SLX1A,SLX1B,BOLA2,LOC606724,BOLA2B,SLX1B,CORO1A	6060,6060,5470,-4823,5470,5470,5984,311,5984,5470,-4823
chr8:128427244-128428086	chr8	+	128427353	128428047	True	NM_001159542,NR_024393	chr8,chr8	+,-	POU5F1B,LOC727677	1,66387
chr1:158150199-158150622	chr1	+	158150274	158150660	True	NR_033946,NM_001766	chr1,chr1	-,+	LOC646268,CD1D	-39844,-600
chr14:21861201-21861785	chr14	+	21861202	21861759	True	NR_002916,NM_014828,NR_003029,NM_007192	chr14,chr14,chr14,chr14	-,+,-,-	SNORD8,TOX4,SNORD9,SUPT16H	3851,83575,-790,-8777
chr20:3052975-3053281	chr20	+	3053003	3053263	True	NM_000490,NM_000915	chr20,chr20	-,+	AVP,OXT	12157,-788
chr17:34759303-34760451	chr17	+	34759329	34760473	True	NM_001123392,NM_004773	chr17,chr17	-,+	TBC1D3H,ZNHIT3	-2279,81999
chr17:34759303-34760451	chr17	-	36280534	36281678	False	NM_032258,NR_024178,NM_001123391	chr17,chr17,chr17	+,-,+	TBC1D3F,LOC284100,TBC1D3	2281,-36171,2281
chr17:34759303-34760451	chr17	+	34810384	34811524	False	NM_001001418,NM_004773,NM_001040282	chr17,chr17,chr17	-,+,-	TBC1D3C,ZNHIT3,TBC1D3G	-2293,30948,-2281
chr17:34759303-34760451	chr17	+	34594320	34595376	False	NM_001001435,NM_001001418	chr17,chr17	+,-	CCL4L1,TBC1D3C	44657,-2293
chr17:34759303-34760451	chr17	+	34506276	34507424	False	NM_001001417,NM_001001435	chr17,chr17	-,+	TBC1D3B,CCL4L1	-2288,31043
chr2:231861139-231862902	chr2	+	231861311	231862490	True	NR_033879,NM_139073	chr2,chr2	-,+	LOC348761,SPATA3	-564,-523
chr20:750959-752938	chr20	+	751445	752863	True	NM_033409,NM_001042353	chr20,chr20	-,+	C20orf54,FAM110A	-2217,61492
chr11:71819742-71821153	chr11	+	71820121	71821197	True	NM_014042,NM_017907,NM_000804	chr11,chr11,chr11	-,-,+	C11orf51,LAMTOR1,FOLR3	2675,-5688,25573
chr19:12273160-12273574	chr19	+	12273378	12273614	True	NM_003437,NR_037801,NR_037802,NM_145233	chr19,chr19,chr19,chr19	+,-,-,-	ZNF136,ZNF625,ZNF625-ZNF20,ZNF625	257,-5832,-5832,-5832
chr22:24116613-24117405	chr22	+	24116646	24117313	True	NM_213720,NM_005940	chr22,chr22	-,+	CHCHD10,MMP11	-6505,-1661
chr22:38669549-38670171	chr22	+	38669553	38669997	True	NM_012264,NM_001195072,NM_001195071,NM_001161573	chr22,chr22,chr22,chr22	-,-,-,+	TMEM184B,TMEM184B,TMEM184B,MAFF	-513,-513,-883,-70590
chrX:153996284-153997116	chrX	+	153996458	153996810	True	NR_002984,NM_080612,NM_001363,NR_002969,NM_001142463	chrX,chrX,chrX,chrX,chrX	+,-,+,+,+	SNORA56,GAB3,DKC1,SNORA36A,DKC1	6462,-17110,-5479,-8,-5479
chr11:60970130-60970748	chr11	+	60970414	60970504	True	NM_001079807,NM_017966	chr11,chr11	+,-	PGA3,VPS37C	479,-41498
chr11:60970130-60970748	chr11	+	60989161	60989251	False	NM_017966,NM_001079808	chr11,chr11	-,+	VPS37C,PGA4	-60245,569
chr7:44645809-44646085	chr7	+	44645820	44646019	True	NM_182547,NM_001003941,NM_001165036,NM_002541	chr7,chr7,chr7,chr7	-,+,+,+	TMED4,OGDH,OGDH,OGDH	-23993,101,101,101
chr9:86974059-86974820	chr9	+	86974058	86974600	True	NM_022127,NM_001018064	chr9,chr9	-,+	SLC28A3,NTRK2	8868,308865
chr9:95431471-95431775	chr9	+	95431535	95431739	True	NM_022755,NR_036505	chr9,chr9	-,+	IPPK,LOC100128361	858,-51254
chr15:34502578-34502972	chr15	+	34502578	34503015	True	NM_024713,NM_016454	chr15,chr15	-,+	C15orf29,TMEM85	-281,14229
chr3:183853544-183853813	chr3	+	183853547	183853859	True	NM_003907,NM_005787	chr3,chr3	+,-	EIF2B5,ALG3	-788,112950
chr3:52444031-52444280	chr3	+	52444073	52444149	True	NM_004656,NM_173341,NM_016483	chr3,chr3,chr3	-,+,+	BAP1,PHF7,PHF7	-64,377,377
chr5:149493020-149494040	chr5	+	149493176	149493962	True	NM_005211,NM_001804	chr5,chr5	-,+	CSF1R,CDX1	-241,52381
chr7:44200096-44202016	chr7	+	44200189	44202037	True	NM_006555,NM_033507,NM_033508	chr7,chr7,chr7	+,-,-	YKT6,GCK,GCK	38540,-1302,-1302
chr11:20620010-20620912	chr11	+	20620116	20620957	True	NM_001029865,NM_004211	chr11,chr11	-,+	DBX1,SLC6A5	-438246,-12
chr1:27928840-27929050	chr1	+	27928959	27929031	True	NM_001029882,NM_001143912	chr1,chr1	-,+	AHDC1,FAM76A	1162,123458
chr16:29628269-29628975	chr16	+	29628663	29628815	True	NR_002593,NM_001030288	chr16,chr16	-,+	SLC7A5P1,SPN	-3625,45484
chr16:29628269-29628975	chr16	+	21543351	21543401	False	NM_001077180,NR_002594	chr16,chr16	+,-	METTL9,SLC7A5P2	67454,-11586
chr19:51302319-51302713	chr19	+	51302377	51302623	True	NR_003067,NR_003069,NR_003068,NM_033068,NM_199249,NM_199250	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,+,-,-	SNORD88A,SNORD88C,SNORD88B,ACPT,C19orf48,C19orf48	219,3105,5,-8756,5401,5399
chr11:47513363-47514982	chr11	+	47513430	47514801	True	NM_001143984,NM_198700,NM_001025596,NM_001172640	chr11,chr11,chr11,chr11	+,-,-,-	PTPMT1,CELF1,CELF1,CELF1	72180,1331,-2854,-2854
chr1:26186217-26186940	chr1	+	26186315	26186620	True	NM_024037,NM_001099626	chr1,chr1	-,+	C1orf135,FAM54B	-467,-39047
chr5:178772365-178772602	chr5	+	178772504	178772630	True	NM_021599,NM_014244,NM_025158	chr5,chr5,chr5	-,-,+	ADAMTS2,ADAMTS2,RUFY1	-73,-73,204940
chr7:48016505-48017413	chr7	+	48016537	48017173	True	NM_001100159,NM_004507,NR_037917	chr7,chr7,chr7	+,-,-	C7orf57,HUS1,HUS1	57943,2107,2107
chr1:89641169-89643131	chr1	+	89641241	89642638	True	NM_198460,NM_207398	chr1,chr1	+,-	GBP6,GBP7	186797,136
chr2:42796492-42797007	chr2	+	42796543	42796936	True	NM_172344,NM_020744	chr2,chr2	-,+	KCNG3,MTA3	-75306,-923
chr4:56461212-56461898	chr4	+	56461294	56461583	True	NM_152401,NM_018475	chr4,chr4	-,+	PDCL2,TMEM165	-2915,-199259
chr11:15780644-15781197	chr11	+	15780712	15781211	True	NM_001145819,NM_001042536	chr11,chr11	-,+	SOX6,INSC	643261,-644279
chr11:61275013-61275489	chr11	+	61275013	61275419	True	NM_001145077,NM_004200	chr11,chr11	+,-	LRRC10B,SYT7	852,72929
chr19:12820438-12820881	chr19	+	12820749	12820907	True	NR_002751,NM_004317	chr19,chr19	-,+	SNORD41,ASNA1	-3417,27398
chr11:17758680-17759571	chr11	+	17758695	17759611	True	NM_004976,NM_153676,NM_001112741	chr11,chr11,chr11	+,-,+	KCNC1,USH1C,KCNC1	-1251,-192732,-1251
chr17:72682525-72683047	chr17	+	72682812	72683043	True	NM_175738,NM_139018	chr17,chr17	+,-	RAB37,CD300LF	-15615,26122
chr11:63258524-63258754	chr11	+	63258681	63258741	True	NM_054108,NM_001146729,NM_001146728,NM_001142535	chr11,chr11,chr11,chr11	-,-,-,+	HRASLS5,HRASLS5,HRASLS5,LGALS12	-1,-1,-1,14782
chr17:46688817-46689078	chr17	+	46688816	46689122	True	NM_004502,NM_024016,NM_018952,NR_033205	chr17,chr17,chr17,chr17	-,-,-,+	HOXB7,HOXB8,HOXB6,LOC404266	-433,3229,-6482,-15547
chr10:115933740-115933978	chr10	+	115933773	115933999	True	NR_031747,NM_198795,NM_018017	chr10,chr10,chr10	-,+,-	MIR2110,TDRD1,C10orf118	-3,5029,415
chr4:24917835-24918275	chr4	+	24917863	24918304	True	NM_001130726,NM_003102	chr4,chr4	-,+	CCDC149,SOD3	-3263,-120837
chr14:63686255-63687902	chr14	+	63686623	63687754	True	NM_145171,NM_020663	chr14,chr14	-,+	GPHB5,RHOJ	96859,-15532
chr19:56251021-56252565	chr19	+	56251428	56252607	True	NM_001145014,NM_176820	chr19,chr19	+,-	RFPL4A,NLRP9	17899,-1660
chr15:50086816-50087232	chr15	+	50086997	50087263	True	NM_020234,NM_152647	chr15,chr15	+,-	DTWD1,C15orf33	-173824,-173879
chr6:143884615-143886475	chr6	+	143884724	143886353	True	NM_001100166,NR_027114,NR_027113	chr6,chr6,chr6	+,-,-	PHACTR2,LOC285740,LOC285740	42963,-1539,4174
chr19:41771388-41772192	chr19	+	41771453	41772043	True	NM_144732,NM_007040,NM_000660	chr19,chr19,chr19	+,+,-	HNRNPUL1,HNRNPUL1,TGFB1	-3113,-1384,87838
chr3:36945605-36946500	chr3	+	36946244	36946416	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	40182,88424
chr1:207120139-207120458	chr1	+	207120139	207120491	True	NM_002644,NM_006850	chr1,chr1	-,+	PIGR,IL24	-328,-49406
chr19:53743742-53744935	chr19	+	53744008	53744883	True	NM_182609,NM_173856	chr19,chr19	-,+	ZNF677,VN1R2	13278,16661
chr9:116635779-116636262	chr9	+	116635825	116636248	True	NM_133374,NM_001633	chr9,chr9	+,-	ZNF618,AMBP	2313,204555
chr22:31532565-31532808	chr22	+	31532584	31532774	True	NM_015715,NM_001002837	chr22,chr22	-,+	PLA2G3,INPP5J	3745,-13674
chr2:106045177-106046929	chr2	+	106045471	106046650	True	NM_024093,NM_201557	chr2,chr2	+,-	C2orf49,FHL2	-91510,8631
chr12:18867485-18868426	chr12	+	18867604	18868285	True	NM_033328,NM_033123	chr12,chr12	+,-	CAPZA3,PLCZ1	22759,22690
chr8:103136402-103136653	chr8	+	103136406	103136504	True	NM_001040630,NM_001040627,NM_001040626,NM_001040625,NM_001040624,NM_001040629,NM_001040628,NM_024410	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,-,-,-,+	NCALD,NCALD,NCALD,NCALD,NCALD,NCALD,NCALD,ODF1	681,108,108,108,108,108,108,427343
chr8:33880072-33880317	chr8	+	33880263	33880349	True	NM_032509,NM_024025	chr8,chr8	+,-	MAK16,DUSP26	-537629,-422824
chr12:51418958-51419657	chr12	+	51418959	51419633	True	NM_000617,NM_001174128,NM_001174129,NM_001174125,NM_001174126,NM_001174127,NM_001024668,NR_033422,NR_033421	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,-,-,-,-,-,+,-,-	SLC11A2,SLC11A2,SLC11A2,SLC11A2,SLC11A2,SLC11A2,LETMD1,SLC11A2,SLC11A2	616,616,341,2475,616,616,22450,616,616
chr20:43378970-43379281	chr20	+	43379012	43379254	True	NM_182970,NM_022358	chr20,chr20	-,+	RIMS4,KCNK15	59708,-4575
chr20:22566935-22567430	chr20	+	22566959	22567267	True	NM_021784,NM_153675,NR_001558,NM_001052	chr20,chr20,chr20,chr20	-,-,-,+	FOXA2,FOXA2,NCRNA00261,SSTR4	-1858,-858,-7679,448789
chr1:28766735-28766997	chr1	+	28766833	28766906	True	NM_023923,NR_003077	chr1,chr1	+,-	PHACTR4,SNORD99	-2226,138483
chr5:137418457-137419608	chr5	+	137418622	137419529	True	NM_016603,NM_058244	chr5,chr5	-,+	FAM13B,WNT8A	-49820,244
chr19:39520572-39521401	chr19	+	39520823	39521240	True	NM_178820,NM_001004318	chr19,chr19	-,+	FBXO27,PAPL	2015,53704
chr20:1873421-1873956	chr20	+	1873487	1873959	True	NM_080792,NM_001190892,NM_001040023,NM_001040022	chr20,chr20,chr20,chr20	+,-,+,+	SIRPA,PDYN,SIRPA,SIRPA	1465,99543,1866,853
chr1:33837651-33839015	chr1	+	33837655	33838683	True	NM_145238,NM_198040	chr1,chr1	+,-	ZSCAN20,PHC2	99548,2561
chr7:105620296-105621306	chr7	+	105620315	105621264	True	NM_152750,NM_152749	chr7,chr7	+,-	CDHR3,ATXN7L1	-16709,-103284
chr4:9671704-9672629	chr4	+	9671914	9672654	True	NR_031688,NM_000798	chr4,chr4	-,+	MIR548I2,DRD5	-113977,110603
chr21:38638750-38639237	chr21	+	38638839	38639161	True	NM_006052,NR_026719	chr21,chr21	-,+	DSCR3,DSCR9	722,-57935
chr17:64185028-64185544	chr17	+	64185031	64185316	True	NM_145036,NM_002737,NM_001199165	chr17,chr17,chr17	-,+,-	CCDC46,PRKCA,CCDC46	2732,113609,2957
chr7:97842053-97842681	chr7	+	97842140	97842540	True	NM_015395,NM_177455	chr7,chr7	-,+	TECPR1,BHLHA15	38978,-625
chr3:194072414-194072629	chr3	+	194072415	194072667	True	NM_001080513,NR_033929	chr3,chr3	-,+	CPN2,FLJ34208	-358,135201
chr6:30885479-30887046	chr6_qbl_hap6	+	2179372	2179560	False	NM_205854,NM_001167733,NM_020442,NM_001167734	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	-,+,+,+	SFTA2,VARS2,VARS2,VARS2	13413,-4456,-4456,-4330
chr6:30885479-30887046	chr6_mcf_hap5	+	2268340	2268528	False	NM_205854,NM_001167733,NM_020442,NM_001167734	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	-,+,+,+	SFTA2,VARS2,VARS2,VARS2	13413,-4454,-4454,-4328
chr6:30885479-30887046	chr6_mann_hap4	+	2234479	2234667	False	NM_205854,NM_001167733,NM_020442,NM_001167734	chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4	-,+,+,+	SFTA2,VARS2,VARS2,VARS2	13416,-4469,-4469,-4343
chr6:30885479-30887046	chr6	+	30886398	30886586	True	NM_205854,NM_001167733,NM_020442,NM_001167734	chr6,chr6,chr6,chr6	-,+,+,+	SFTA2,VARS2,VARS2,VARS2	13416,-4467,-4467,-4341
chr6:30885479-30887046	chr6_dbb_hap3	+	2180508	2180696	False	NM_205854,NM_001167733,NM_020442,NM_001167734	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	-,+,+,+	SFTA2,VARS2,VARS2,VARS2	13416,-4465,-4465,-4339
chr14:94758685-94759248	chr14	+	94758775	94759165	True	NM_001100607,NM_058237,NM_016186	chr14,chr14,chr14	-,+,-	SERPINA10,PPP4R4,SERPINA10	481,-118179,246
chr19:51304133-51304586	chr19	+	51304152	51304552	True	NR_003067,NR_003069,NR_003068,NM_033068,NM_199249,NM_199250	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,+,-,-	SNORD88A,SNORD88C,SNORD88B,ACPT,C19orf48,C19orf48	-1360,1176,-1770,-10531,3472,3470
chr9:117685956-117687067	chr9	+	117686130	117686988	True	NM_017418,NM_001244	chr9,chr9	+,-	DEC1,TNFSF8	217108,5838
chr17:43208850-43209286	chr17	+	43208876	43209240	True	NM_024722,NM_133373,NM_001135707,NM_001135706,NM_001135705,NM_001135704	chr17,chr17,chr17,chr17,chr17,chr17	+,-,+,+,+,+	ACBD4,PLCD3,ACBD4,ACBD4,ACBD4,ACBD4	3773,701,3773,3773,3773,726
chr22:24889315-24890174	chr22	+	24889470	24890222	True	NR_028483,NR_028484,NM_016327	chr22,chr22,chr22	-,-,+	C22orf45,C22orf45,UPB1	611,611,1028
chr5:2753466-2753836	chr5	+	2753730	2753880	True	NM_178569,NM_001134222,NM_033267	chr5,chr5,chr5	+,-,-	C5orf38,IRX2,IRX2	-1519,-1961,-1961
chr15:59497645-59498548	chr15	+	59497651	59498549	True	NM_033195,NR_031750	chr15,chr15	+,-	LDHAL6B,MIR2116	492,-34190
chr1:154348509-154349296	chr1	+	154348605	154349138	True	NM_001010846,NM_000565	chr1,chr1	-,+	SHE,IL6R	125443,28530
chr3:9945189-9946878	chr3	+	9945215	9946192	True	NM_001193380,NM_153480,NM_001199552,NM_153483	chr3,chr3,chr3,chr3	+,+,-,+	IL17RE,IL17RE,CIDEC,IL17RE	-754,-754,-23277,-970
chr12:6561570-6562495	chr12	+	6561877	6562469	True	NM_001242,NM_018009,NR_015382	chr12,chr12,chr12	+,+,-	CD27,TAPBPL,LOC678655	-7877,-751,-1194
chr19:5691171-5691478	chr19	+	5691170	5691478	True	NM_033643,NM_205767,NM_015414	chr19,chr19,chr19	+,-,+	RPL36,C19orf70,RPL36	-949,-10259,-875
chr6:27445227-27445557	chr6	+	27445231	27445557	True	NM_001076781,NM_007149	chr6,chr6	+,-	ZNF391,ZNF184	-88765,-4334
chrX:38078211-38079259	chrX	+	38078326	38079190	True	NM_006307,NM_000531,NM_001170752,NM_001170751,NM_001170750	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	SRPX,OTC,SRPX,SRPX,SRPX	1037,132545,1037,1037,1037
chr2:190040485-190040972	chr2	+	190040603	190040990	True	NM_000393,NR_037401	chr2,chr2	-,+	COL5A2,MIR3606	3666,-180311
chr15:83877124-83877356	chr15	+	83877167	83877405	True	NM_016073,NM_023003	chr15,chr15	-,+	HDGFRP3,TM6SF1	-846,-100894
chr11:62522761-62523318	chr11	+	62522801	62523246	True	NM_002696,NM_024784	chr11,chr11	+,-	POLR2G,ZBTB3	5764,-1145
chr5:32710748-32711149	chr5	+	32710868	32711192	True	NM_001204376,NM_000908,NM_001204375,NM_016107	chr5,chr5,chr5,chr5	+,+,+,-	NPR3,NPR3,NPR3,ZFR	-176,245,245,-266024
chr19:4180890-4181503	chr19	+	4180991	4181514	True	NM_016539,NM_133475,NM_001193285	chr19,chr19,chr19	-,+,-	SIRT6,ANKRD24,SIRT6	1133,1836,1133
chr18:11377524-11378325	chr18	+	11377550	11378282	True	NM_022068,NM_182978	chr18,chr18	-,+	FAM38B,GNAL	-228789,310853
chr1:117741065-117742241	chr1	+	117741164	117741743	True	NM_024626,NR_030640	chr1,chr1	-,+	VTCN1,MIR942	11863,-103950
chr16:20339418-20340310	chr16	+	20339529	20340331	True	NM_017888,NM_001502,NM_001007240,NM_001007241,NM_001007242	chr16,chr16,chr16,chr16,chr16	+,-,-,-,-	ACSM5,GP2,GP2,GP2,GP2	80524,-694,-694,-694,-694
chr16:2255866-2256119	chr16	+	2255886	2256011	True	NM_001199174,NM_001199175,NM_001199173,NM_182563,NM_022372,NM_020764,NM_001042371	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,-,+,-,-	MLST8,MLST8,MLST8,C16orf79,MLST8,CASKIN1,PGP	-205,-759,-759,5109,-759,-9421,8862
chr16:30009665-30010086	chr16	+	30009675	30010085	True	NM_003609,NM_173618	chr16,chr16	-,+	HIRIP3,INO80E	-2263,-2196
chr5:170847139-170847513	chr5	+	170847189	170847477	True	NM_003862,NR_037474	chr5,chr5	+,-	FGF18,MIR3912	-573,-33425
chr9:99776099-99776568	chr9	+	99776166	99776360	True	NM_001045477,NR_002894	chr9,chr9	+,-	FAM22G,HIATL2	-84931,-304
chr3:149187842-149188061	chr3	+	149187914	149188054	True	NM_004617,NM_014220	chr3,chr3	+,-	TM4SF4,TM4SF1	4313,-92346
chr6:52622910-52623243	chr6	+	52622946	52623037	True	NM_014051,NM_000846	chr6,chr6	+,-	TMEM14A,GSTA2	-87113,5381
chr10:47244419-47244633	chr10	+	47244488	47244658	True	NR_027634,NR_024495	chr10,chr10	+,-	FAM35B2,LOC642826	135061,-994
chr10:47244419-47244633	chr10	+	46763723	46763893	False	NR_027632,NR_026566,NR_003611	chr10,chr10,chr10	+,-,-	FAM35B,BMS1P1,BMS1P5	133747,-831,-831
chr10:47244419-47244633	chr10	-	48184698	48184868	False	NM_002900,NR_024495	chr10,chr10	-,+	RBP3,LOC642826	206173,987
chr10:47244419-47244633	chr10	+	48953460	48953630	False	NR_026566,NM_153034,NR_003611	chr10,chr10,chr10	-,+,-	BMS1P1,ZNF488,BMS1P5	-831,-598422,-831
chr6:170569902-170571419	chr6	+	170570028	170571376	True	NM_032448,NR_002787	chr6,chr6	+,-	FAM120B,LOC154449	44467,331
chr4:144435031-144435314	chr4	+	144435048	144435356	True	NM_001168235,NM_003601	chr4,chr4	-,+	FREM3,SMARCA5	186522,-483
chr14:103670159-103672096	chr14	+	103670279	103671826	True	NR_033938,NM_006291	chr14,chr14	-,+	LOC100131366,TNFAIP2	-14914,-77666
chr19:14798378-14798966	chr19	+	14798506	14799013	True	NM_032433,NM_032571	chr19,chr19	+,-	ZNF333,EMR3	1856,-12776
chr2:198378430-198379050	chr2	+	198378540	198378936	True	NM_199482,NM_015387,NM_001100819,NM_199440,NM_001204094	chr2,chr2,chr2,chr2,chr2	+,+,+,-,+	MOBKL3,MOBKL3,MOBKL3,HSPD1,MOBKL3	1358,1830,1830,-13542,2085
chr19:42760286-42760489	chr19	+	42760290	42760510	True	NM_006494,NM_015125	chr19,chr19	-,+	ERF,CIC	-981,28306
chr12:110272966-110273403	chr12	+	110272966	110273432	True	NM_021625,NM_001143852	chr12,chr12	-,+	TRPV4,TCHP	-1754,64646
chr16:2528177-2529598	chr16	+	2528449	2529517	True	NM_001199107,NM_006181,NM_020705,NM_001048212	chr16,chr16,chr16,chr16	+,+,+,-	TBC1D24,NTN3,TBC1D24,CEMP1	-3353,-7000,-3353,51942
chr1:46909621-46910944	chr1	+	46909683	46910797	True	NM_001097611,NM_001441	chr1,chr1	-,+	KNCN,FAAH	106140,-49795
chr5:63257883-63258309	chr5	+	63257899	63258338	True	NM_000524,NM_178532	chr5,chr5	-,+	HTR1A,RNF180	-353,203332
chr16:71916094-71917346	chr16	+	71916426	71917392	True	NM_014761,NM_017530,NM_001201554,NM_001201556,NM_001201552,NM_001201553	chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,-,-,-	KIAA0174,ZNF821,ZNF821,ZNF821,ZNF821,ZNF821	12053,102,751,751,751,102
chr19:3702541-3702913	chr19	+	3702541	3702681	True	NM_014428,NM_012398,NM_001195733	chr19,chr19,chr19	+,-,-	TJP3,PIP5K1C,PIP5K1C	25692,-2064,-2064
chr14:69619078-69619769	chr14	+	69619125	69619564	True	NM_003861,NM_001193360	chr14,chr14	-,+	DCAF5,EXD2	400,38629
chr15:59695480-59696374	chr15	+	59695739	59696424	True	NM_152450,NM_004998	chr15,chr15	+,-	FAM81A,MYO1E	33947,-30668
chr12:31798511-31799335	chr12	+	31798557	31799148	True	NM_001135864,NM_144973	chr12,chr12	+,-	METTL20,DENND5B	945,-54605
chr10:48255251-48255655	chr10	+	48255362	48255692	True	NM_001137549,NM_001137548,NM_001137556,NM_001098845,NM_001040084,NM_002900	chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,-	FAM25G,FAM25C,FAM25B,ANXA8L1,ANXA8,RBP3	-7751,-7751,-7751,-106,-188,135349
chr10:48255251-48255655	chr10	-	49199473	49199687	False	NM_001137549,NM_001137548,NM_002750,NM_001137556	chr10,chr10,chr10,chr10	-,-,+,-	FAM25G,FAM25C,MAPK8,FAM25B	8188,8188,409999,8188
chr10:48255251-48255655	chr10	-	47173654	47173984	False	NM_001137549,NM_001137548,NM_005972,NM_001137556,NM_001098845,NM_001040084	chr10,chr10,chr10,chr10,chr10,chr10	-,-,+,-,-,-	FAM25G,FAM25C,PPYR1,FAM25B,ANXA8L1,ANXA8	7754,7754,-90171,7754,106,188
chr10:48255251-48255655	chr10	+	47747161	47747375	False	NR_024495,NM_001630	chr10,chr10	-,+	LOC642826,ANXA8L2	-503667,-292
chrX:152242167-152242370	chrX	+	152242171	152242401	True	NM_032882,NM_001170944	chrX,chrX	+,+	PNMA6A,LOC100287428	-1383,-1403
chrX:152242167-152242370	chrX	-	152244395	152244625	False	NM_032882,NM_001170944	chrX,chrX	-,+	PNMA6A,LOC100287428	1383,-3627
chrX:152242167-152242370	chrX	+	152339633	152339863	False	NM_032882	chrX	-	PNMA6A	-93675
chrX:152242167-152242370	chrX	-	152341857	152342087	False	NM_032882	chrX	-	PNMA6A	-95899
chr7:150932289-150932493	chr7	+	150932326	150932542	True	NM_007189,NM_005692,NR_030407,NM_019015	chr7,chr7,chr7,chr7	-,-,+,+	ABCF2,ABCF2,MIR671,CHPF2	-8009,-8009,2964,-2792
chr5:133751096-133752620	chr5	+	133751193	133752387	True	NM_003337,NM_080656	chr5,chr5	+,-	UBE2B,CDKN2AIPNL	-44386,-3595
chr12:106530920-106531770	chr12	+	106531125	106531599	True	NM_014840,NM_152772	chr12,chr12	-,+	NUAK1,TCP11L2	2262,164981
chr12:27089089-27090884	chr12	+	27089149	27090769	True	NM_001171887,NM_001171888,NM_015633,NM_018164	chr12,chr12,chr12,chr12	+,+,+,-	FGFR1OP2,FGFR1OP2,FGFR1OP2,C12orf11	535,535,535,535
chr12:31723371-31724699	chr12	+	31723707	31724272	True	NM_001135864,NM_144973	chr12,chr12	+,-	METTL20,DENND5B	75821,19731
chr6:10830801-10831704	chr6	+	10830854	10831713	True	NM_001040274,NM_005906	chr6,chr6	+,-	SYCP2L,MAK	55350,66
chr2:21021362-21021975	chr2	+	21021778	21021891	True	NM_021925,NM_182828	chr2,chr2	-,+	C2orf43,GDF7	995,-155412
chr2:42586057-42586748	chr2	+	42586451	42586767	True	NM_019063,NM_004718	chr2,chr2	+,-	EML4,COX7A2L	-190012,1639
chr9:114663265-114664246	chr9	+	114663456	114664268	True	NM_003358,NM_173521	chr9,chr9	+,-	UGCG,C9orf84	-4310,-117677
chr9:47166692-47167838	chr9	+	47167504	47167820	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-3536774,-479989
chr9:47166692-47167838	chr9	-	67681637	67681953	False	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	112286,244807
chr9:47166692-47167838	chr9	-	46272978	46273036	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2642248,414529
chr9:47166692-47167838	chr9	+	45110283	45110341	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-120098,-1479553
chr9:47166692-47167838	chr9	-	44760400	44760716	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	229519,-1129670
chr17:64185544-64186281	chr17	+	64185634	64185877	True	NM_145036,NM_002737,NM_001199165	chr17,chr17,chr17	-,+,-	CCDC46,PRKCA,CCDC46	2168,113048,2393
chrX:23763547-23764731	chrX	+	23763858	23764239	True	NM_001037171,NM_002970,NM_001033583	chrX,chrX,chrX	-,+,-	ACOT9,SAT1,ACOT9	-2451,37035,-2451
chr3:130292137-130292501	chr3	+	130292147	130292379	True	NM_001102608,NM_014602	chr3,chr3	+,-	COL6A6,PIK3R4	-13020,173377
chr1:247580308-247580942	chr1	+	247580308	247580719	True	NM_183395,NM_001079821,NM_004895,NM_001127461,NM_001004492,NM_001127462	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,-,+	NLRP3,NLRP3,NLRP3,NLRP3,OR2B11,NLRP3	631,-901,631,-901,34624,631
chr17:37023956-37024616	chr17	+	37024024	37024590	True	NM_000978,NM_006148	chr17,chr17	-,+	RPL23,LASP1	-13971,1521
chr21:17486640-17487394	chr21	+	17487116	17487300	True	NM_003489,NR_027790	chr21,chr21	-,+	NRIP1,C21orf34	-1049990,-44325
chr4:71769790-71770398	chr4	+	71770006	71770202	True	NM_002092,NM_173468	chr4,chr4	-,+	GRSF1,MOBKL1A	-64379,-2004
chr10:73534263-73534954	chr10	+	73534280	73534976	True	NM_022153,NM_001171933	chr10,chr10	-,+	C10orf54,CDH23	-943,20551
chr4:154125011-154125239	chr4	+	154125071	154125233	True	NR_001562,NM_015271	chr4,chr4	-,+	ANXA2P1,TRIM2	104784,364
chr9:34178172-34178550	chr9	+	34178376	34178465	True	NR_033243,NM_016525,NM_015397,NM_001171204,NM_001171202,NM_001171203,NM_001171201	chr9,chr9,chr9,chr9,chr9,chr9,chr9	+,+,-,+,+,+,+	UBAP1,UBAP1,DCAF12,UBAP1,UBAP1,UBAP1,UBAP1	537,537,-51605,537,537,537,537
chr13:99736701-99737446	chr13	+	99736713	99737388	True	NM_001130049,NM_015296,NM_001144072	chr13,chr13,chr13	-,-,+	DOCK9,DOCK9,UBAC2	1322,1322,115290
chr17:63133519-63134284	chr17	+	63133658	63134275	True	NM_006572,NM_003835,NM_001165933,NM_001081955	chr17,chr17,chr17,chr17	-,+,+,+	GNA13,RGS9,RGS9,RGS9	-80738,-253,-253,-253
chr9:33023514-33023878	chr9	+	33023542	33023921	True	NM_001539,NR_036577	chr9,chr9	+,-	DNAJA1,APTX	1287,-21903
chr12:8381636-8383497	chr12	+	8381840	8383444	True	NM_018088,NR_026788	chr12,chr12	-,+	FAM90A1,FAM66C	-1626,-49086
chr8:11560247-11560508	chr8	+	11560260	11560556	True	NM_002052,NM_001908	chr8,chr8	+,-	GATA4,CTSB	1160,165140
chr1:161067884-161068182	chr1	+	161067903	161068135	True	NM_030916,NR_033386,NR_033385,NM_152366,NM_001007255	chr1,chr1,chr1,chr1,chr1	-,+,+,+,+	PVRL4,KLHDC9,KLHDC9,KLHDC9,KLHDC9	-8518,15,15,45,45
chr9:97487174-97488075	chr9	+	97487275	97487941	True	NM_001127628,NM_032823,NM_001193331	chr9,chr9,chr9	-,+,+	FBP1,C9orf3,C9orf3	-84744,1009,1009
chr5:139739918-139740435	chr5	+	139739947	139740417	True	NM_001945,NM_031467	chr5,chr5	-,+	HBEGF,SLC4A9	-13759,-211
chr20:57597111-57598915	chr20	+	57597386	57598651	True	NM_001001977,NM_030773,NM_006886	chr20,chr20,chr20	-,+,-	ATP5E,TUBB1,ATP5E	8821,-3135,8799
chr9:86596881-86597294	chr9	+	86596942	86597295	True	NM_002140,NM_031263,NM_024945,NM_031262	chr9,chr9,chr9,chr9	-,-,+,-	HNRNPK,HNRNPK,RMI1,HNRNPK	-1373,-1758,-1362,-1373
chr19:29380931-29381504	chr19	+	29380939	29381553	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	74484,322633
chr20:18445622-18446488	chr20	+	18445622	18446533	True	NR_036160,NM_006466,NM_001099407	chr20,chr20,chr20	+,+,-	MIR3192,POLR3F,C20orf12	4725,1499,1346
chr8:28348113-28348598	chr8	+	28348185	28348644	True	NM_017412,NM_172366,NM_145866	chr8,chr8,chr8	+,-,+	FZD3,FBXO16,FZD3	3077,-401,3077
chr11:2398228-2398448	chr11	+	2398235	2398391	True	NM_004356,NM_014555	chr11,chr11	+,-	CD81,TRPM5	155,45934
chr15:89534015-89535948	chr15	+	89534359	89535906	True	NM_007011,NM_005928	chr15,chr15	+,-	ABHD2,MFGE8	95474,-77696
chr2:230567487-230569380	chr2	+	230567654	230569231	True	NM_174899,NM_139072	chr2,chr2	+,-	FBXO36,DNER	217975,10120
chr1:156543448-156545135	chr1	+	156543685	156544516	True	NM_001105669,NM_178229	chr1,chr1	+,-	TTC24,IQGAP3	5002,-1289
chr2:98612504-98612782	chr2	+	98612523	98612821	True	NM_015348,NM_144992	chr2,chr2	-,+	TMEM131,VWA3B	-169,90773
chr3:21786216-21787628	chr3	+	21786405	21787615	True	NR_002311,NM_024697	chr3,chr3	+,-	VENTXP7,ZNF385D	-339238,5251
chr16:74398662-74399158	chr16	+	74398687	74398798	True	NR_026950,NM_002811	chr16,chr16	-,+	LOC283922,PSMD7	3418,-68074
chr12:82770747-82772553	chr12	+	82771032	82772529	True	NM_032230,NR_033192	chr12,chr12	+,-	C12orf26,CCDC59	-18807,-18448
chr1:91485218-91487163	chr1	+	91485652	91486848	True	NM_016620,NM_001134419,NM_201269,NM_032186	chr1,chr1,chr1,chr1	-,+,-,-	ZNF644,CDC7,ZNF644,ZNF644	232,479555,873,873
chr12:13250751-13252608	chr12	+	13250863	13252631	True	NM_001080555,NM_153823,NM_031289,NM_020853,NM_001080554	chr12,chr12,chr12,chr12,chr12	-,-,-,+,-	GSG1,GSG1,GSG1,KIAA1467,GSG1	4038,-2154,-2154,-53600,4038
chr2:44291123-44291433	chr2	+	44291273	44291335	True	NM_133259,NM_001033556	chr2,chr2	-,+	LRPPRC,PPM1B	-68129,104664
chr15:81425882-81426595	chr15	+	81425937	81426472	True	NM_015154,NM_173528	chr15,chr15	-,+	MESDC2,C15orf26	-143732,171
chr16:19079896-19081399	chr16	+	19080002	19081093	True	NM_015092,NM_001190983,NM_016138	chr16,chr16,chr16	-,+,+	SMG1,COQ7,COQ7	-142276,-816,-1138
chr10:15140739-15142654	chr10	+	15140964	15142688	True	NM_183005,NM_001097590,NM_153244,NM_006414	chr10,chr10,chr10,chr10	+,+,-,+	RPP38,RPP38,C10orf111,RPP38	-1842,-1842,-1646,-1842
chr4:40632018-40632438	chr4	+	40632017	40632361	True	NM_001098634,NM_024677	chr4,chr4	-,+	RBM47,NSUN7	-134,119552
chr1:150979262-150979902	chr1	+	150979266	150979688	True	NM_001040217,NM_021222,NM_001163258,NM_001163259,NM_018379,NM_001163260	chr1,chr1,chr1,chr1,chr1,chr1	-,+,-,-,-,-	FAM63A,PRUNE,FAM63A,FAM63A,FAM63A,FAM63A	19,1284,1216,7,1216,7
chr4:129208735-129209003	chr4	+	129208835	129208905	True	NM_006320,NM_018078	chr4,chr4	-,+	PGRMC2,LARP1B	1129,-226383
chr4:49285071-49286425	chr4	+	49285404	49286079	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-297190,-376589
chr4:49285071-49286425	chr4	+	49291417	49292094	False	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-303203,-382602
chr4:49285071-49286425	chr4	-	49328217	49328892	False	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-340004,-419402
chr3:121554275-121554599	chr3	+	121554406	121554602	True	NM_001023570,NM_001023571,NM_018456	chr3,chr3,chr3	-,-,+	IQCB1,IQCB1,EAF2	-480,-480,-423
chr19:1243576-1244264	chr19	+	1243729	1244177	True	NM_001001975,NM_152769,NM_001687,NM_177401	chr19,chr19,chr19,chr19	+,-,+,+	ATP5D,C19orf26,ATP5D,MIDN	-2031,-5739,-2031,4374
chr11:6948099-6949858	chr11	+	6948138	6949213	True	NM_003700,NM_013250,NM_001004684	chr11,chr11,chr11	-,+,+	OR2D2,ZNF215,OR2D3	-34407,-535,-5956
chr20:25665241-25666218	chr20	+	25665907	25665996	True	NM_021067,NM_015655	chr20,chr20	+,-	GINS1,ZNF337	-277635,11524
chr22:43545035-43545318	chr22	+	43545042	43545180	True	NM_007311,NM_014507,NM_173467,NM_000714	chr22,chr22,chr22,chr22	+,-,-,+	TSPO,MCAT,MCAT,TSPO	2354,-5639,-5639,2354
chr7:139746152-139746944	chr7	+	139746224	139746866	True	NM_022750,NR_024451	chr7,chr7	-,+	PARP12,LOC100134229	16705,130194
chr1:219691186-219692235	chr1	+	219691497	219692258	True	NM_138794,NM_018713	chr1,chr1	+,-	LYPLAL1,SLC30A10	-344364,409792
chr7:142481350-142482833	chr7	+	142481412	142482652	True	NM_002770,NM_018646,NR_001296	chr7,chr7,chr7	+,-,+	PRSS2,TRPV6,TRY6	-1558,100875,-2709
chr15:55582655-55582859	chr15	+	55582656	55582822	True	NM_004855,NM_183235	chr15,chr15	+,-	PIGB,RAB27A	28310,-655
chr4:184424436-184425301	chr4	+	184424480	184425220	True	NR_033995,NM_001564	chr4,chr4	-,+	LOC389247,ING2	498,999
chr9:139738250-139738454	chr9	+	139738253	139738417	True	NM_003792,NM_206920,NM_014172,NM_001080482,NM_001135861	chr9,chr9,chr9,chr9,chr9	-,+,+,+,+	EDF1,MAMDC4,PHPT1,C9orf172,PHPT1	22371,8401,4838,449,4838
chr9:98187809-98188416	chr9	+	98187988	98188436	True	NR_029496,NM_001083607	chr9,chr9	+,-	MIR24-1,PTCH1	-339747,81095
chr1:202131067-202131302	chr1	+	202131155	202131351	True	NR_002930,NR_037663,NR_037664,NM_001199797,NM_080588,NM_002832	chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,-,-,-	PTPRVP,PTPN7,PTPN7,PTPN7,PTPN7,PTPN7	5827,-439,-439,-439,-2036,-439
chr1:26505671-26506714	chr1	+	26505676	26506262	True	NM_015871,NM_032588,NM_006314,NR_023345	chr1,chr1,chr1,chr1	+,-,+,+	ZNF593,TRIM63,CNKSR1,CNKSR1	-9346,-111555,-1753,-1752
chr7:6525689-6526349	chr7	+	6526064	6526405	True	NM_006854,NM_001134387,NM_001100603	chr7,chr7,chr7	-,+,-	KDELR2,ZDHHC4,KDELR2	-2215,90659,-2215
chr19:8070954-8071831	chr19	+	8070997	8071871	True	NM_001419,NM_001201359	chr19,chr19	-,+	ELAVL1,CCL25	-468,45774
chr17:34056185-34057045	chr17	+	34056419	34057023	True	NM_033315,NM_139285	chr17,chr17	+,-	RASL10B,GAS2L2	1655,22924
chr22:43485989-43486716	chr22	+	43486079	43486553	True	NM_001197,NR_027779,NM_012263	chr22,chr22,chr22	+,-,-	BIK,TTLL1,TTLL1	20203,-645,-645
chr3:69963363-69964863	chr3	+	69963652	69964851	True	NM_001184968,NM_015123	chr3,chr3	+,-	MITF,FRMD4B	20899,-528222
chr18:10615098-10615701	chr18	+	10615371	10615737	True	NM_003826,NM_022068	chr18,chr18	+,-	NAPG,FAM38B	-89556,533074
chr18:10615098-10615701	chr18	-	12220079	12220130	False	NM_006796,NM_001279	chr18,chr18	-,+	AFG3L2,CIDEA	157196,34187
chr3:52566620-52566870	chr3	+	52566631	52566847	True	NM_001124767,NM_001134231,NM_022908	chr3,chr3,chr3	+,-,-	C3orf78,NT5DC2,NT5DC2	3773,996,2296
chr15:91083118-91083811	chr15	+	91083117	91083565	True	NM_001042574,NR_028287,NM_022769	chr15,chr15,chr15	+,-,+	CRTC3,GABARAPL3,CRTC3	-9971,-190438,-9971
chr11:67775079-67775299	chr11	+	67775081	67775297	True	NM_001030010,NM_030930,NM_000694,NM_001161473	chr11,chr11,chr11,chr11	+,-,+,+	ALDH3B1,UNC93B1,ALDH3B1,ALDH3B1	2492,-3488,2492,750
chr11:119062979-119063515	chr11	+	119062998	119063298	True	NM_001145018,NM_001168468,NR_033122,NM_024791	chr11,chr11,chr11,chr11	-,+,+,+	CCDC153,PDZD3,PDZD3,PDZD3	3337,-6896,-6896,-6896
chr1:226130369-226130752	chr1	+	226130408	226130718	True	NM_003240,NM_000120,NM_001172425	chr1,chr1,chr1	-,+,-	LEFTY2,EPHX1,LEFTY2	-1325,-117470,-1325
chr2:175111955-175112882	chr2	+	175112126	175112672	True	NM_013341,NM_001011708,NM_001145250	chr2,chr2,chr2	-,-,+	OLA1,OLA1,SP9	743,743,87148
chr10:104210721-104210966	chr10	+	104210803	104210971	True	NM_024789,NM_024886	chr10,chr10	+,-	TMEM180,C10orf95	10198,379
chr9:67681615-67682762	chr9	+	67681638	67681954	True	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	112285,244806
chr9:67681615-67682762	chr9	-	45110282	45110340	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-120097,-1479552
chr9:67681615-67682762	chr9	+	44760401	44760717	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	229518,-1129671
chr9:67681615-67682762	chr9	+	46272979	46273037	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2642249,414528
chr9:67681615-67682762	chr9	-	47167503	47167819	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-3536773,-479988
chr1:1983836-1984103	chr1	+	1983961	1984103	True	NM_002744,NM_001080484	chr1,chr1	+,-	PRKCZ,KIAA1751	-2103,-48685
chr11:56426029-56426787	chr11	+	56426397	56426834	True	NM_001004730,NM_001002925	chr11,chr11	+,-	OR5AR1,OR5AP2	4327,-16482
chrX:46306270-46306475	chrX	+	46306309	46306523	True	NM_001039891,NM_001129898,NM_001129899,NM_001129900,NM_017776	chrX,chrX,chrX,chrX,chrX	-,+,+,+,+	ZNF674,ZNF673,ZNF673,ZNF673,ZNF673	98419,100,100,100,100
chr12:66589530-66591368	chr12	+	66589959	66591409	True	NM_016056,NM_007199,NM_001142523	chr12,chr12,chr12	-,+,+	TMBIM4,IRAK3,IRAK3	-26152,-7033,-7033
chr3:52089394-52089716	chr3	+	52089409	52089537	True	NM_001198898,NR_027331,NM_001947	chr3,chr3,chr3	+,-,-	ACY1,C3orf74,DUSP7	-72160,9641,974
chr6:117802399-117803554	chr6	+	117802540	117803452	True	NM_173674,NM_002944	chr6,chr6	+,-	DCBLD1,ROS1	367,-55522
chr12:99048344-99049146	chr12	+	99048460	99048567	True	NM_001160,NM_181869,NM_181868,NM_181861,NM_153687,NM_013229,NM_201613,NM_201612	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,+,+,-,+,-,-	APAF1,APAF1,APAF1,APAF1,IKBIP,APAF1,IKBIP,IKBIP	-9439,-9439,-9439,-9439,-9871,-9439,-9871,-9871
chr2:73115079-73115564	chr2	+	73115168	73115604	True	NM_003124,NM_015189	chr2,chr2	+,-	SPR,EXOC6B	-707,-61991
chr14:23590199-23590818	chr14	+	23590444	23590812	True	NM_001805,NM_017924	chr14,chr14	-,+	CEBPE,C14orf119	-1970,-25714
chr10:99052122-99052330	chr10	+	99052223	99052309	True	NR_037909,NM_005479,NM_032900,NM_001204300	chr10,chr10,chr10,chr10	-,+,-,-	ARHGAP19-SLIT1,FRAT1,ARHGAP19,ARHGAP19	171,26712,171,171
chr19:4769248-4769651	chr19	+	4769285	4769695	True	NR_029607,NR_027148,NM_139159	chr19,chr19,chr19	+,+,-	MIR7-3,C19orf30,DPP9	986,-219,-45430
chr2:33746768-33746998	chr2	+	33746777	33747039	True	NM_015376,NM_015475	chr2,chr2	+,-	RASGRP3,FAM98A	-7892,77375
chr5:472391-472599	chr5	+	472521	472583	True	NM_007277,NR_024158	chr5,chr5	+,-	EXOC3,LOC25845	-29238,547
chr2:37572901-37574589	chr2	+	37573142	37574604	True	NM_012413,NM_005813	chr2,chr2	+,-	QPCT,PRKD3	-1447,-28920
chr22:45682596-45683010	chr22	+	45682622	45683010	True	NM_006953,NM_001009880,NM_001167574	chr22,chr22,chr22	+,-,+	UPK3A,KIAA0930,UPK3A	-1805,-45972,-1805
chr17:38805815-38806325	chr17	+	38805921	38806258	True	NM_001195387,NM_003079	chr17,chr17	+,-	TMEM99,SMARCE1	169085,-1818
chr16:57829440-57829896	chr16	+	57829443	57829783	True	NM_001130099,NM_001130100,NM_005550,NM_005886	chr16,chr16,chr16,chr16	-,-,-,+	KIFC3,KIFC3,KIFC3,KATNB1	2196,6706,6706,-59836
chr6:10524128-10524574	chr6	+	10524221	10524477	True	NM_145649,NR_027793	chr6,chr6	+,-	GCNT2,C6orf218	-2704,-89166
chr20:57088695-57089338	chr20	+	57088752	57089098	True	NM_153360,NR_034147	chr20,chr20	-,+	APCDD1L,LOC149773	901,1336
chr14:23395748-23397743	chr14	+	23395779	23397790	True	NM_006109,NM_173527,NM_001077351,NM_001077352,NM_018107,NM_001039619	chr14,chr14,chr14,chr14,chr14,chr14	-,+,-,-,-,-	PRMT5,REM2,RBM23,RBM23,RBM23,PRMT5	921,-43398,-7383,-7383,-7383,921
chr1:182359304-182359600	chr1	+	182359371	182359521	True	NR_034131,NM_001033044,NM_002065,NM_001033056	chr1,chr1,chr1,chr1	+,-,-,-	NCRNA00272,GLUL,GLUL,GLUL	17234,1870,1870,1068
chr16:29688426-29688693	chr16	+	29688466	29688542	True	NR_002593,NM_014298	chr16,chr16	-,+	SLC7A5P1,QPRT	-63428,1898
chr7:128313737-128314422	chr7	+	128313741	128314331	True	NM_001708,NM_001012454,NM_001128926	chr7,chr7,chr7	-,+,+	OPN1SW,FAM71F2,FAM71F2	101563,-1446,-1446
chr11:116661390-116661676	chr11	+	116661527	116661641	True	NM_003904,NM_000040,NM_001166598,NM_052968	chr11,chr11,chr11,chr11	-,+,-,-	ZNF259,APOC3,APOA5,APOA5	-2788,38982,1545,1545
chr14:20881111-20881371	chr14	+	20881123	20881231	True	NM_007110,NM_001641	chr14,chr14	-,+	TEP1,APEX1	398,42058
chrX:97992167-97993038	chrX	+	97992270	97992720	True	NM_022144,NR_024608	chrX,chrX	+,-	TNMD,LOC442459	1847069,1202179
chr1:200861904-200862871	chr1	+	200861942	200862866	True	NM_001142569,NM_018265,NM_017596	chr1,chr1,chr1	+,+,-	C1orf106,C1orf106,KIF21B	1132,-1355,130012
chr16:81810007-81811340	chr16	+	81810131	81811292	True	NM_002661,NM_145168	chr16,chr16	+,-	PLCG2,SDR42E1	1637,233851
chr3:127784878-127785424	chr3	+	127784904	127785210	True	NM_013336,NM_003707	chr3,chr3	+,-	SEC61A1,RUVBL1	-13744,57511
chr6:53662477-53663470	chr6	+	53662541	53663518	True	NM_018214,NM_001003760	chr6,chr6	+,-	LRRC1,KLHL31	-2814,-132035
chr22:39885689-39886546	chr22	+	39885712	39886554	True	NM_001098270,NM_194326	chr22,chr22	+,-	MGAT3,RPS19BP1	-2534,42356
chr5:1883236-1883444	chr5	+	1883246	1883426	True	NM_016358,NM_004553	chr5,chr5	-,+	IRX4,NDUFS6	-366,-81801
chr2:226285485-226286419	chr2	+	226285516	226286452	True	NM_014689,NM_020864	chr2,chr2	-,+	DOCK10,KIAA1486	-378186,-19979
chr3:44690671-44692351	chr3	+	44690700	44692381	True	NM_003420,NM_020696	chr3,chr3	+,-	ZNF35,KIAA1143	-519,110842
chr19:50320037-50320901	chr19	+	50320066	50320902	True	NM_025129,NR_033269,NM_001171937,NM_030973	chr19,chr19,chr19,chr19	-,-,-,+	FUZ,FUZ,FUZ,MED25	-3499,-3499,-3499,633
chr16:28621073-28621380	chr16	+	28621161	28621375	True	NM_177529,NM_138414,NM_001055,NM_177530,NM_177534	chr16,chr16,chr16,chr16,chr16	-,+,-,-,-	SULT1A1,CCDC101,SULT1A1,SULT1A1,SULT1A1	32,-55963,32,-512,-512
chr1:155106712-155107508	chr1	+	155106800	155107430	True	NM_004428,NM_018973,NM_153741,NM_018845,NM_001122839,NM_001122837,NM_182685	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,+,+,+,+	EFNA1,DPM3,DPM3,SLC50A1,SLC50A1,SLC50A1,EFNA1	-6502,5503,5616,857,857,857,-6502
chr16:19533376-19533799	chr16	+	19533546	19533844	True	NM_001199022,NM_014711,NM_016641	chr16,chr16,chr16	+,+,-	CP110,CP110,GDE1	1334,1334,-96
chr10:43865540-43865882	chr10	+	43865627	43865706	True	NM_001184963,NM_001098208,NM_173160	chr10,chr10,chr10	+,-,+	FXYD4,HNRNPF,FXYD4	1385,26630,1385
chrX:114424299-114424602	chrX	+	114424488	114424564	True	NM_001145346,NM_020871	chrX,chrX	+,-	RBMXL3,LRCH2	-576,44121
chr15:76195374-76196161	chr15	+	76195457	76196159	True	NM_147188,NR_003136,NM_012170,NR_037623	chr15,chr15,chr15,chr15	+,-,+,+	FBXO22,FBXO22OS,FBXO22,FBXO22	40,29362,40,40
chr2:223543582-223545372	chr2	+	223543848	223545133	True	NM_058165,NM_005687	chr2,chr2	+,-	MOGAT1,FARSB	-7455,-23021
chr17:73285883-73286899	chr17	+	73285886	73286374	True	NM_021734,NM_001126122,NM_001126121,NR_036520	chr17,chr17,chr17,chr17	-,-,-,+	SLC25A19,SLC25A19,SLC25A19,LOC100287042	-356,-356,-356,-18557
chr11:74442934-74443675	chr11	+	74442994	74443688	True	NM_015424,NM_001098638	chr11,chr11	-,+	CHRDL2,RNF169	-808,16224
chrX:100238436-100239261	chrX	+	100238630	100239078	True	NM_212559,NM_001162491	chrX,chrX	-,+	XKRX,ARL13A	-54732,-13991
chr10:60940293-60941692	chr10	+	60940293	60941728	True	NM_032439,NM_001001971,NM_001143774	chr10,chr10,chr10	+,-,+	PHYHIPL,FAM13C,PHYHIPL	-3999,180675,-3120
chr19:52932687-52932939	chr19	+	52932748	52932850	True	NM_001143939,NM_001143938,NM_001105549	chr19,chr19,chr19	+,+,-	ZNF534,ZNF534,ZNF83	1816,1816,208850
chr14:23071386-23072530	chr14	+	23071599	23072346	True	NM_022060,NM_001344	chr14,chr14	+,-	ABHD4,DAD1	-4503,-13456
chr20:31408668-31408912	chr20	+	31408668	31408778	True	NM_012325,NM_053041	chr20,chr20	+,-	MAPRE1,COMMD7	-1020,-76854
chr20:45306836-45307211	chr20	+	45306886	45307245	True	NM_030777,NM_001011554,NM_001193340	chr20,chr20,chr20	+,-,-	SLC2A10,SLC13A3,SLC13A3	31033,5930,5930
chr2:97531898-97532131	chr2	+	97532044	97532170	True	NM_016466,NM_017789,NM_199078	chr2,chr2,chr2	-,-,+	ANKRD39,SEMA4C,CNNM3	-8288,3615,-50104
chrX:37207966-37208554	chrX	+	37207965	37208239	True	NM_001173489,NM_001173486,NM_001173490,NM_001142395,NM_000950,NM_006520	chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,-	PRRG1,PRRG1,PRRG1,PRRG1,PRRG1,DYNLT3	343,288,343,288,288,498700
chr19:52302223-52302490	chr19	+	52302425	52302495	True	NM_002029,NM_002030	chr19,chr19	-,+	FPR1,FPR3	-47275,-4065
chrX:128911154-128911400	chrX	+	128911188	128911418	True	NM_001008222,NM_018990	chrX,chrX	-,+	ZDHHC9,SASH3	66193,2473
chr1:110698708-110700049	chr1	+	110698748	110699914	True	NM_006492,NM_001010898	chr1,chr1	-,+	ALX3,SLC6A17	-85426,-5667
chr19:19326158-19327211	chr19	+	19326276	19326914	True	NM_176880,NM_004386	chr19,chr19	-,+	NR2C2AP,NCAN	-12038,-3545
chr8:105577807-105579672	chr8	+	105578280	105579382	True	NM_001135703,NM_030788	chr8,chr8	-,+	LRP12,TM7SF4	21924,-226277
chr12:102272863-102273691	chr12	+	102273074	102273493	True	NM_018370,NM_024312	chr12,chr12	+,-	DRAM1,GNPTAB	-2033,-48429
chr12:51593636-51594014	chr12	+	51593643	51594007	True	NM_002702,NM_001136264	chr12,chr12	-,+	POU6F1,DAZAP2	-1693,38500
chr4:103265809-103266055	chr4	+	103265852	103265958	True	NM_001165412,NM_022154,NM_001135147,NM_001135146	chr4,chr4,chr4,chr4	+,-,-,-	NFKB1,SLC39A8,SLC39A8,SLC39A8	156527,440,502,747
chr15:80988692-80989354	chr15	+	80988702	80989393	True	NM_021214,NR_030393	chr15,chr15	+,-	FAM108C1,MIR549	-1101,145071
chr2:23627609-23628180	chr2	+	23627608	23628041	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	521952,-19361
chr9:91944498-91945689	chr9	+	91944669	91945721	True	NM_001142287,NM_024077	chr9,chr9	-,+	SEMA4D,SECISBP2	148940,-11315
chr3:128225822-128226393	chr3	+	128225832	128226374	True	NR_026954,NM_032638	chr3,chr3	+,-	LOC90246,GATA2	303,-13802
chr2:43035262-43035848	chr2	+	43035271	43035880	True	NM_020744,NM_012205	chr2,chr2	+,-	MTA3,HAAO	-239658,-15520
chr9:139761078-139761310	chr9	+	139761134	139761208	True	NM_003792,NM_153200,NM_206920	chr9,chr9,chr9	-,-,+	EDF1,EDF1,MAMDC4	-396,-396,-14366
chr19:57830328-57831703	chr19	+	57830962	57831714	True	NM_020633,NM_213598	chr19,chr19	-,+	VN1R1,ZNF543	136443,150
chr1:13644813-13645325	chr1	+	13645118	13645180	True	NM_001099854,NM_001098376,NM_001010890	chr1,chr1,chr1	-,+,+	PRAMEF14,PRAMEF15,PRAMEF9	28381,-3196,-3196
chr1:13644813-13645325	chr1	-	12888268	12888330	False	NM_023014,NM_001146344	chr1,chr1	+,-	PRAMEF2,PRAMEF11	28610,2984
chr1:13644813-13645325	chr1	+	13424321	13424383	False	NM_001098376,NM_001024661,NM_001010890	chr1,chr1,chr1	+,-,+	PRAMEF15,PRAMEF13,PRAMEF9	-3196,28323,-3196
chr2:110966132-110967053	chr2	+	110966270	110967074	True	NM_207181,NM_001128178,NM_001128179,NR_037626,NM_000272	chr2,chr2,chr2,chr2,chr2	-,-,-,+,-	NPHP1,NPHP1,NPHP1,LOC100507334,NPHP1	-3631,-3631,-3631,36140,-3631
chr16:86258069-86259999	chr16	+	86258297	86260012	True	NR_024406,NM_001451	chr16,chr16	-,+	LOC732275,FOXF1	119323,284120
chr12:122669496-122670602	chr12	+	122669698	122670546	True	NM_001014336,NM_001098519	chr12,chr12	-,+	IL31,LRRC43	-10952,-2082
chr11:126860395-126860799	chr11	+	126860577	126860837	True	NM_001161707,NR_036126,NM_032531,NM_006278	chr11,chr11,chr11,chr11	-,-,-,+	KIRREL3,MIR3167,KIRREL3,ST3GAL4	9979,-2139,9979,-634532
chr2:74751279-74751932	chr2	+	74751320	74751744	True	NM_016170,NM_133637,NM_181575,NM_145074,NM_013247	chr2,chr2,chr2,chr2,chr2	+,-,-,+,+	TLX2,DQX1,AUP1,HTRA2,HTRA2	-9775,1714,5280,4787,4787
chr11:63973950-63974392	chr11	+	63974146	63974332	True	NM_178443,NM_001160393,NM_031471	chr11,chr11,chr11	+,-,+	FERMT3,TRPT1,FERMT3	-45,19059,-45
chr5:34660494-34661282	chr5	+	34660577	34661321	True	NM_001145520,NR_026591,NM_001145522,NM_015577	chr5,chr5,chr5,chr5	+,-,+,+	RAI14,RAD1,RAI14,RAI14	-4039,254460,-4202,-4202
chr16:2262962-2263445	chr16	+	2262967	2263343	True	NM_001199174,NM_001199175,NM_001199173,NM_182563,NM_022372,NM_001042371	chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,-,+,-	MLST8,MLST8,MLST8,C16orf79,MLST8,PGP	-7286,-7840,-7840,-1898,-7840,1529
chr6:26385937-26386146	chr6	+	26386076	26386190	True	NM_006995,NM_003543,NM_181531,NM_001197237,NM_001197239,NM_001197238,NM_001197240	chr6,chr6,chr6,chr6,chr6,chr6,chr6	+,-,+,+,+,+,+	BTN2A2,HIST1H4H,BTN2A2,BTN2A2,BTN2A2,BTN2A2,BTN2A2	-2798,-100349,-2798,-2688,-2798,-2803,-2798
chr21:38462138-38463972	chr21	+	38462385	38463465	True	NM_003316,NR_028352	chr21,chr21	+,-	TTC3,PIGP	-7197,-16927
chr1:161577031-161577604	chr1	+	161577128	161577620	True	NM_000570,NR_024151	chr1,chr1	-,+	FCGR3B,HSPA7	23588,-1330
chr1:161577031-161577604	chr1	+	161495495	161495993	False	NM_000569,NM_002155	chr1,chr1	-,+	FCGR3A,HSPA6	23881,-1510
chr1:156124905-156126412	chr1	+	156124922	156126298	True	NM_001093725,NM_001193302,NM_001193301,NM_001193300,NM_022367	chr1,chr1,chr1,chr1,chr1	-,+,+,+,+	MEX3A,SEMA4A,SEMA4A,SEMA4A,SEMA4A	-73133,-1604,-5238,-1651,-1651
chr1:102462588-102462875	chr1	+	102462680	102462920	True	NR_033424,NM_058170	chr1,chr1	+,-	DNAJA1P5,OLFM3	-125164,-32
chr1:19969809-19970265	chr1	+	19969837	19970295	True	NM_001204085,NM_001204084,NM_181719,NM_005380,NM_182744,NM_001204086	chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,+,+,+	NBL1,NBL1,TMCO4,NBL1,NBL1,NBL1	1570,44,156165,511,-165,1964
chr16:28303119-28303448	chr16	+	28303154	28303402	True	NM_001024401,NM_015171	chr16,chr16	+,-	SBK1,XPO6	437,-79964
chr19:18199050-18200150	chr19	+	18199483	18200162	True	NM_015016,NM_005535,NM_153701	chr19,chr19,chr19	+,-,-	MAST3,IL12RB1,IL12RB1	8440,-1786,-1786
chr21:45345809-45346323	chr21	+	45345864	45346176	True	NR_026961,NM_001037553	chr21,chr21	-,+	LOC284837,AGPAT3	-113416,-636
chr2:88371293-88371895	chr2	+	88371537	88371633	True	NM_016618,NM_198274	chr2,chr2	-,+	KRCC1,SMYD1	-16289,-4302
chr4:76599036-76599773	chr4	+	76599041	76599818	True	NM_203505,NM_203504,NM_012297,NM_003715	chr4,chr4,chr4,chr4	-,-,-,+	G3BP2,G3BP2,G3BP2,USO1	-374,-374,-698,50010
chr1:153896334-153897216	chr1	+	153896336	153897056	True	NM_130898,NM_020699	chr1,chr1	+,-	CREB3L4,GATAD2B	43340,-885
chr22:29167945-29168336	chr22	+	29168153	29168320	True	NM_173510,NM_001079539	chr22,chr22	+,-	CCDC117,XBP1	341,28301
chr7:50180185-50180561	chr7	+	50180274	50180544	True	NM_007009,NM_001161834	chr7,chr7	-,+	ZPBP,C7orf72	-47414,-44644
chr2:224567241-224567665	chr2	+	224567350	224567438	True	NM_022915,NM_003469	chr2,chr2	+,-	MRPL44,SCG2	254682,-100133
chr8:143870117-143870732	chr8	+	143870195	143870653	True	NM_002066,NM_003695	chr8,chr8	+,-	GML,LY6D	45563,-2187
chr20:49640314-49640573	chr20	+	49640397	49640543	True	NM_002237,NM_014484	chr20,chr20	-,+	KCNG1,MOCS3	-722,-65085
chr18:61805463-61805867	chr18	+	61805615	61805899	True	NR_027245,NR_033881	chr18,chr18	-,+	C18orf20,LOC284294	10413,-34349
chr3:149376692-149377044	chr3	+	149376808	149377072	True	NM_007282,NM_001168280,NM_015472	chr3,chr3,chr3	+,-,-	RNF13,WWTR1,WWTR1	153402,-996,-920
chr12:4225794-4226644	chr12	+	4225812	4226597	True	NM_001759,NM_020367	chr12,chr12	+,-	CCND2,PARP11	156304,-243204
chr12:94848903-94849540	chr12	+	94849072	94849547	True	NM_001042399,NM_016122,NR_027035	chr12,chr12,chr12	-,-,+	CCDC41,CCDC41,LOC144486	4268,4268,4231
chr9:133592228-133593120	chr9	+	133592294	133593120	True	NM_007313,NR_027440	chr9,chr9	+,-	ABL1,LOC100272217	-3089,-137413
chr1:28558369-28559247	chr1	+	28558824	28559236	True	NM_178191,NM_016311,NM_014280,NM_178190	chr1,chr1,chr1,chr1	+,+,-,+	ATPIF1,ATPIF1,DNAJC8,ATPIF1	3365,3365,356,3365
chr15:43511131-43511998	chr15	+	43511279	43511807	True	NM_000119,NM_001114134,NM_037370	chr15,chr15,chr15	-,-,+	EPB42,EPB42,CCNDBP1	1569,1569,-33193
chr12:53661106-53661621	chr12	+	53661184	53661465	True	NM_012291,NM_000966	chr12,chr12	+,-	ESPL1,RARG	617,-35148
chr6:53413074-53413821	chr6	+	53413152	53413722	True	NM_018214,NM_001498,NM_001197115	chr6,chr6,chr6	+,-,-	LRRC1,GCLC,GCLC	246055,-3225,-3225
chr19:13068586-13069301	chr19	+	13068821	13068961	True	NM_152654,NM_052850	chr19,chr19	+,-	DAND5,GADD45GIP1	11470,-771
chr7:129594861-129595070	chr7	+	129594941	129595014	True	NM_182697,NM_001202498,NM_003344,NM_014997	chr7,chr7,chr7,chr7	-,-,-,+	UBE2H,UBE2H,UBE2H,KLHDC10	-2141,-2158,-2141,115334
chr2:153031555-153032028	chr2	+	153031643	153031845	True	NM_052905,NM_005843	chr2,chr2	+,-	FMNL2,STAM2	159905,711
chr14:74958945-74959730	chr14	+	74959072	74959632	True	NM_194279,NM_006432	chr14,chr14	+,-	ISCA2,NPC2	817,502
chr2:71125323-71125747	chr2	+	71125323	71125795	True	NM_015717,NM_012476	chr2,chr2	-,+	CD207,VAX2	-62370,1924
chr1:4055747-4057633	chr1	+	4056148	4057670	True	NR_024455,NM_207356	chr1,chr1	+,-	LOC100133612,C1orf174	-239231,-239291
chr1:76252358-76252945	chr1	+	76252358	76252880	True	NM_004582,NM_002440,NM_080868,NR_002749,NR_002748,NR_003042	chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,+,+,+	RABGGTB,MSH4,ASB17,SNORD45A,SNORD45B,SNORD45C	-523,9749,145294,693,2281,67
chr10:28964300-28964759	chr10	+	28964330	28964570	True	NR_033805,NM_012342	chr10,chr10	-,+	LOC220906,BAMBI	-143047,1853
chr17:56314345-56315808	chr17	+	56314344	56315788	True	NM_006151,NR_027647,NM_001160102,NM_001165927	chr17,chr17,chr17,chr17	+,+,+,-	LPO,LPO,LPO,MKS1	-2,-2,-2,-17378
chr6:34202705-34202937	chr6	+	34202840	34202958	True	NM_002131,NM_145899,NM_001008703,NM_145902,NM_145903,NM_145901,NM_145905	chr6,chr6,chr6,chr6,chr6,chr6,chr6	+,+,-,+,+,+,+	HMGA1,HMGA1,C6orf1,HMGA1,HMGA1,HMGA1,HMGA1	1618,1618,13996,1691,1618,1691,3609
chr21:30365316-30366757	chr21	+	30365429	30366447	True	NM_015565,NM_001001992	chr21,chr21	-,+	LTN1,USP16	-152,30490
chr17:7657290-7657669	chr17	+	7657346	7657684	True	NR_002778,NM_001126114	chr17,chr17	+,-	RPL29P2,TP53	6,-66483
chr19:45201264-45201990	chr19	+	45201353	45201783	True	NM_001039213,NR_027754	chr19,chr19	+,-	CEACAM16,CEACAM22P	637,-141203
chr19:36249304-36249659	chr19	+	36249346	36249570	True	NM_019104,NM_001039887,NM_144617	chr19,chr19,chr19	+,+,-	LIN37,C19orf55,HSPB6	-9891,-359,-1416
chr21:30962037-30962730	chr21	+	30962039	30962753	True	NM_175611,NR_033368	chr21,chr21	-,+	GRIK1,NCRNA00258	349579,5606
chrX:153995293-153996216	chrX	+	153995325	153996088	True	NR_002984,NM_080612,NM_001363,NR_002969,NM_001142463	chrX,chrX,chrX,chrX,chrX	+,-,+,+,+	SNORA56,GAB3,DKC1,SNORA36A,DKC1	7184,-15977,-4345,714,-4345
chr1:230776960-230778180	chr1	+	230777028	230777886	True	NM_001145036,NM_007357,NM_000029	chr1,chr1,chr1	+,+,-	COG2,COG2,AGT	315,315,72500
chr7:32529538-32529984	chr7	+	32529540	32529992	True	NM_015060,NM_001130710,NR_024466,NM_001139499,NM_012322	chr7,chr7,chr7,chr7,chr7	+,-,-,-,-	AVL9,LSM5,LSM5,LSM5,LSM5	5183,4928,533,4928,81
chr6:2635875-2636239	chr6	+	2635951	2636268	True	NM_152554,NM_020135	chr6,chr6	-,+	C6orf195,WRNIP1	-653,129397
chr8:110708584-110709048	chr8	+	110708826	110709087	True	NM_001099744,NM_004215,NM_001099743	chr8,chr8,chr8	-,+,-	SYBU,EBAG9,SYBU	-4806,-156575,-4806
chr19:19384208-19384925	chr19	+	19384246	19384621	True	NM_001001524,NM_015329	chr19,chr19	-,+	TM6SF2,MAU2	-172,47008
chr3:61188078-61188574	chr3	+	61188225	61188467	True	NM_002841,NM_001166243	chr3,chr3	+,-	PTPRG,FHIT	358775,48716
chr4:49512478-49513836	chr4	+	49512668	49513808	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-524454,-603853
chr12:56494348-56494993	chr12	+	56494745	56495021	True	NM_001130420,NM_006191	chr12,chr12	-,+	SMARCC2,PA2G4	88380,3081
chr4:108745937-108746153	chr4	+	108745948	108746040	True	NM_001136258,NM_005443	chr4,chr4	+,-	SGMS2,PAPSS1	-278,-104529
chr2:231170629-231170895	chr2	+	231170755	231170941	True	NM_138402,NM_001185015	chr2,chr2	+,-	SP140L,SP110	20952,-80311
chr1:11715152-11715512	chr1	+	11715333	11715499	True	NM_001014765,NM_018438,NM_012168,NM_033182,NM_183412,NM_183413	chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,+,+,+	FBXO44,FBXO6,FBXO2,FBXO44,FBXO44,FBXO44	-470,8650,-445,-470,-952,-470
chr4:130032904-130033663	chr4	+	130032907	130033635	True	NM_001099783,NM_144643	chr4,chr4	+,-	C4orf33,SCLT1	-15690,-18143
chr12:108955888-108956390	chr12	+	108955939	108956313	True	NM_213595,NM_014301,NM_014706	chr12,chr12,chr12	+,+,-	ISCU,ISCU,SART3	-20,-20,-774
chr5:148757629-148757981	chr5	+	148757720	148757990	True	NM_024028,NM_014443	chr5,chr5	+,-	PCYOX1L,IL17B	-20202,898
chr13:76111964-76112329	chr13	+	76112151	76112315	True	NM_203497,NM_203495,NM_006002	chr13,chr13,chr13	-,-,+	COMMD6,COMMD6,UCHL3	-160,-160,11611
chrX:128786406-128787153	chrX	+	128786574	128787168	True	NM_017413,NM_003399	chrX,chrX	-,+	APLN,XPNPEP2	1815,85777
chrX:111915016-111915702	chrX	+	111915048	111915583	True	NM_001004308,NM_178175	chrX,chrX	+,-	ZCCHC16,LHFPL1	-588847,7849
chr2:88747116-88747858	chr2	+	88747288	88747890	True	NM_152670,NM_001135649	chr2,chr2	+,-	C2orf51,FOXI3	76278,4213
chr4:21949091-21949399	chr4	+	21949148	21949457	True	NM_001128432,NM_147182	chr4,chr4	+,-	GBA3,KCNIP4	745090,976
chr11:46300178-46300912	chr11	+	46300433	46300893	True	NM_000741,NM_052854	chr11,chr11	-,+	CHRM4,CREB3L1	107264,-1256
chr20:23967215-23968384	chr20	+	23967218	23967740	True	NM_178312,NM_178311,NR_001279	chr20,chr20,chr20	-,-,+	GGTLC1,GGTLC1,CSTT	-58,1726,-467486
chr21:45722493-45722835	chr21	+	45722535	45722816	True	NR_024108,NM_002626,NM_004928	chr21,chr21,chr21	+,+,-	PFKL,PFKL,C21orf2	-2661,-2656,36520
chr2:129278596-129279223	chr2	+	129278746	129279065	True	NM_004807,NR_027671	chr2,chr2	-,+	HS6ST1,UGGT1	-202575,-430015
chr9:88991958-88992551	chr9	+	88992070	88992146	True	NM_024617,NM_024635	chr9,chr9	-,+	ZCCHC6,NAA35	-22668,-436071
chr1:157559036-157559358	chr1	+	157559039	157559357	True	NM_018240,NM_031282	chr1,chr1	+,-	KIRREL,FCRL4	403705,8563
chr5:135066635-135067976	chr5	+	135066642	135067474	True	NM_145282,NR_027127	chr5,chr5	+,-	SLC25A48,LOC340074	102890,-77018
chr10:128600128-128600573	chr10	+	128600175	128600606	True	NM_001004298,NM_001380	chr10,chr10	-,+	C10orf90,DOCK1	-390165,-6203
chr19:19646886-19647410	chr19	+	19646947	19647199	True	NM_032037,NM_153221,NM_001190328,NM_198537	chr19,chr19,chr19,chr19	-,+,+,+	TSSK6,CILP2,YJEFN3,YJEFN3	-20478,1874,-7328,-7328
chr7:5111420-5111790	chr7	+	5111419	5111749	True	NR_015343,NR_034163	chr7,chr7	+,-	LOC389458,ZNF890P	5,72478
chr11:64051400-64051624	chr11	+	64051418	64051533	True	NM_020155,NM_001170881,NM_001170880,NM_004322,NM_001177358,NM_001170726,NM_033310,NM_032989	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,-,+,+,+,-	GPR137,GPR137,GPR137,BAD,GPR137,GPR137,KCNK4,BAD	2048,751,2048,698,749,277,7259,698
chr9:80794526-80796340	chr9	+	80794777	80795593	True	NM_001098802,NM_002072	chr9,chr9	+,-	CEP78,GNAQ	55397,-148558
chr2:190525749-190526089	chr2	+	190525751	190526136	True	NM_019048,NM_014585	chr2,chr2	+,-	ASNSD1,SLC40A1	-12,-80214
chr14:98645669-98646901	chr14	+	98645697	98646684	True	NR_015430,NM_182560	chr14,chr14	-,+	C14orf64,C14orf177	-201236,531265
chr2:228737130-228737419	chr2	+	228737202	228737468	True	NM_025243,NM_178821	chr2,chr2	-,+	SLC19A3,WDR69	-154457,-926
chr7:5552974-5553210	chr7	+	5553181	5553243	True	NM_024963,NM_003088	chr7,chr7	-,+	FBXL18,FSCN1	206,79210
chr5:149737622-149737966	chr5	+	149737671	149737999	True	NM_001135244,NM_001135243,NM_001195141,NM_001135245,NM_000356,NM_001008657,NM_001025159	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,-	TCOF1,TCOF1,TCOF1,TCOF1,TCOF1,TCOF1,CD74	-520,-520,-520,-520,-520,-520,54375
chr19:1001255-1001489	chr19	+	1001258	1001534	True	NM_138690,NM_001033026	chr19,chr19	+,-	GRIN3B,C19orf6	-872,19657
chr7:143012471-143012903	chr7	+	143012514	143012948	True	NM_000083,NM_014690	chr7,chr7	+,-	CLCN1,FAM131B	270,46275
chrX:9733899-9734621	chrX	+	9734014	9734460	True	NM_001649,NM_000273	chrX,chrX	+,-	SHROOM2,GPR143	20035,-9
chr19:35645762-35646044	chr19	+	35645913	35646027	True	NM_001164605,NM_144779,NM_139284,NR_028406,NM_014164	chr19,chr19,chr19,chr19,chr19	+,+,-,+,+	FXYD5,FXYD5,LGI4,FXYD5,FXYD5	-119,-292,-19735,-292,-339
chr7:97361765-97362201	chr7	+	97361771	97362051	True	NM_001178077,NM_013997,NM_013996,NM_003182,NM_013998	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	ASNS,TAC1,TAC1,TAC1,TAC1	139476,-551,-551,-551,-551
chr22:39743950-39744561	chr22	+	39744095	39744267	True	NM_001033853,NM_145731,NM_004711	chr22,chr22,chr22	-,+,+	RPL3,SYNGR1,SYNGR1	-28425,1686,1686
chr9:139947516-139947793	chr9	+	139947523	139947829	True	NM_207309,NM_001246,NM_203468,NM_015392	chr9,chr9,chr9,chr9	+,-,-,-	UAP1L1,ENTPD2,ENTPD2,NPDC1	24123,726,726,-6847
chr15:22320305-22320830	chr15	+	22320440	22320859	True	NR_015416,NR_028506	chr15,chr15	+,-	LOC727924,NF1P1	-42459,-174638
chr18:21450189-21452160	chr18	+	21450280	21452176	True	NM_000227,NM_173505,NM_001127718	chr18,chr18,chr18	+,-,+	LAMA3,ANKRD29,LAMA3	807,-207431,807
chr6:11379540-11380465	chr6	+	11379973	11380481	True	NM_001142393,NM_001100829	chr6,chr6	-,+	NEDD9,TMEM170B	2150,158029
chr19:35846794-35847982	chr19	+	35846799	35847788	True	NM_005303,NM_152481,NM_005304	chr19,chr19,chr19	+,-,+	FFAR1,FAM187B,FFAR3	-4405,-127171,1699
chr2:99071007-99071602	chr2	+	99071081	99071553	True	NM_001008215,NM_001134225,NM_001134224,NM_001566,NM_004027	chr2,chr2,chr2,chr2,chr2	-,+,+,+,+	C2orf64,INPP4A,INPP4A,INPP4A,INPP4A	153452,-9811,-9811,-9811,-9811
chr4:1892617-1893089	chr4	+	1892916	1893089	True	NM_007331,NM_012318,NM_133330,NM_133331,NM_133334,NM_133335	chr4,chr4,chr4,chr4,chr4,chr4	+,-,+,+,+,+	WHSC1,LETM1,WHSC1,WHSC1,WHSC1,WHSC1	1419,-34942,1419,1419,9263,1419
chr9:137534208-137534532	chr9	+	137534233	137534521	True	NR_037469,NM_000093	chr9,chr9	-,+	MIR3689B,COL5A1	207647,-632
chr17:27169885-27170246	chr17	+	27169970	27170132	True	NM_018182,NM_001077498,NM_005702	chr17,chr17,chr17	-,-,+	C17orf63,C17orf63,ERAL1	-129,-129,11910
chr18:906290-906562	chr18	+	906454	906546	True	NM_001117,NM_001099733,NM_005433	chr18,chr18,chr18	+,+,-	ADCYAP1,ADCYAP1,YES1	-1209,-1562,-94127
chr9:86431609-86432092	chr9	+	86431645	86432063	True	NM_025211,NM_001135953,NM_024945	chr9,chr9,chr9	-,-,+	GKAP1,GKAP1,RMI1	739,739,163573
chr9:86431609-86432092	chr9	-	88420970	88421021	False	NR_029410,NM_015239	chr9,chr9	+,-	LOC389765,AGTPBP1	-105,-64026
chr12:109748727-109749535	chr12	+	109748837	109749571	True	NM_213596,NM_001101421	chr12,chr12	-,+	FOXN4,MYO1H	-1812,76952
chr14:52733810-52734453	chr14	+	52733954	52734282	True	NM_007361,NM_000953	chr14,chr14	-,+	NID2,PTGDR	-198008,148
chr12:6832967-6833189	chr12	+	6832978	6833212	True	NM_001164095,NM_001164094,NM_153685,NM_001164093,NM_016319	chr12,chr12,chr12,chr12,chr12	+,+,-,+,+	COPS7A,COPS7A,C12orf53,COPS7A,COPS7A	32,25,-23166,236,-17
chr1:12907950-12908223	chr1	+	12907969	12908162	True	NM_001013631,NM_023014,NM_001146181	chr1,chr1,chr1	-,+,-	HNRNPCL1,PRAMEF2,LOC649330	467,8778,126
chr1:12907950-12908223	chr1	+	13183699	13183892	False	NM_001100631,NM_001136561	chr1,chr1	+,-	PRAMEF22,LOC440563	-148207,485
chr8:110388772-110389741	chr8	+	110388909	110389793	True	NM_177531,NM_032869	chr8,chr8	+,-	PKHD1L1,NUDCD1	-14266,-42559
chr11:59222500-59223386	chr11	+	59222527	59223406	True	NM_001004708,NM_001001954	chr11,chr11	+,-	OR4D6,OR5A2	1027,-32101
chr19:6775070-6775679	chr19	+	6775212	6775704	True	NM_005490,NM_005428	chr19,chr19	-,+	SH2D3A,VAV1	-7689,-2542
chr1:203155015-203156518	chr1	+	203155122	203156281	True	NM_001276,NM_001048230	chr1,chr1	-,+	CHI3L1,ADORA1	32,-58337
chr20:48332327-48333108	chr20	+	48332327	48333085	True	NM_015266,NM_004776	chr20,chr20	+,-	SLC9A8,B4GALT5	96164,-1906
chr12:25796371-25797721	chr12	+	25796524	25797758	True	NM_001164748,NM_001145727	chr12,chr12	+,-	RASSF8,IFLTD1	314205,3780
chr8:107668237-107669776	chr8	+	107668399	107669548	True	NM_139166,NM_181354	chr8,chr8	-,+	ABRA,OXR1	112980,487
chr16:48716166-48716848	chr16	+	48716339	48716849	True	NM_153029,NM_031490	chr16,chr16	-,+	N4BP1,LONP2	-72219,-438180
chr1:85359910-85360141	chr1	+	85359950	85360049	True	NM_145172,NM_012152	chr1,chr1	+,-	WDR63,LPAR3	167943,-1054
chr3:197024068-197024564	chr3	+	197024084	197024350	True	NM_001204386,NM_004087,NR_024388,NM_001098424	chr3,chr3,chr3,chr3	-,-,+,-	DLG1,DLG1,LOC152217,DLG1	1147,1147,-354642,1147
chr17:71308121-71308361	chr17	+	71308128	71308346	True	NM_012121,NM_017941	chr17,chr17	-,+	CDC42EP4,C17orf80	15,-79403
chr1:205179324-205179970	chr1	+	205179368	205179960	True	NM_014858,NM_015375,NM_199462	chr1,chr1,chr1	+,-,-	TMCC2,DSTYK,DSTYK	17077,817,817
chr7:94953905-94954142	chr7	+	94953978	94954182	True	NM_145872,NM_000446	chr7,chr7	+,-	ASB4,PON1	161030,-94
chr6:26286146-26286963	chr6	+	26286255	26287004	True	NM_003525,NM_003543	chr6,chr6	+,-	HIST1H2BI,HIST1H4H	-13103,-528
chrX:91036296-91036972	chrY	+	4870295	4870815	False	NM_032971,NR_001540	chrY,chrY	+,-	PCDH11Y,TTTY23	-2079,1240887
chrX:91036296-91036972	chrX	+	91036340	91036903	True	NM_032967,NM_004538	chrX,chrX	+,-	PCDH11X,NAP1L3	-2131,1891829
chr5:43118813-43120696	chr5	+	43118961	43120211	True	NM_003432,NR_034127	chr5,chr5	+,-	ZNF131,LOC100132356	1430,-51888
chr1:9650060-9650314	chr1	+	9650094	9650328	True	NM_001130924,NR_027045,NM_001010866	chr1,chr1,chr1	+,-,+	TMEM201,C1orf200,TMEM201	-1213,64366,-1213
chr19:58544992-58545352	chr19	+	58545079	58545147	True	NM_182572,NM_025027	chr19,chr19	+,-	ZSCAN1,ZNF606	286,-30365
chr17:7453829-7454125	chr17	+	7453872	7454168	True	NM_172087,NM_003808,NM_003809,NM_172089,NM_172088,NM_006942,NM_001198624,NM_001198623,NM_001198622,NR_037146	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,-,+,+,+,+	TNFSF13,TNFSF13,TNFSF12,TNFSF12-TNFSF13,TNFSF13,SOX15,TNFSF13,TNFSF13,TNFSF13,TNFSF12	7440,7440,-1548,-1548,7440,39370,7440,7440,7440,-1548
chr22:38595787-38597067	chr22	+	38595823	38597052	True	NM_001161573,NM_001161572,NM_001161574,NM_012323,NM_001199562	chr22,chr22,chr22,chr22,chr22	+,+,+,+,-	MAFF,MAFF,MAFF,MAFF,PLA2G6	1974,886,886,886,-17987
chr16:3071845-3072505	chr16	+	3072030	3072537	True	NM_001142350,NM_024339,NM_017885,NM_001002017,NM_016639,NM_021195,NM_020982,NM_001002018	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,-,-,+,-,+,-	THOC6,THOC6,HCFC1R1,HCFC1R1,TNFRSF12A,CLDN6,CLDN9,HCFC1R1	1494,1494,1800,1800,-1768,-3842,-9624,1800
chr3:32280655-32281438	chr3	+	32280696	32281396	True	NM_017784,NM_178868	chr3,chr3	-,+	OSBPL10,CMTM8	-257354,-576
chrX:74143987-74144246	chrX	+	74143994	74144278	True	NM_145052,NM_001008537	chrX,chrX	+,-	UPRT,KIAA2022	349615,1059
chr9:140140935-140141457	chr9	+	140141051	140141452	True	NM_001004353,NM_006088,NM_001001710,NM_015456	chr9,chr9,chr9,chr9	+,+,-,+	C9orf173,TUBB2C,FAM166A,COBRA1	4277,-5391,820,8306
chr15:83419965-83420582	chr15	+	83420039	83420431	True	NR_036446,NR_003011	chr15,chr15	-,+	LOC283693,SCARNA15	-11507,4265
chr22:23877149-23877625	chr22	+	23877153	23877653	True	NM_153615,NM_020070	chr22,chr22	+,-	RGL4,IGLL1	155394,44892
chr9:127688691-127688916	chr9	+	127688708	127688940	True	NM_030978,NM_002077	chr9,chr9	+,-	ARPC5L,GOLGA1	-57275,14498
chr22:35560743-35562144	chr22	+	35561144	35561583	True	NM_001003681,NM_005368	chr22,chr22	+,-	HMGXB4,MB	91861,451862
chr1:111060011-111060542	chr1	+	111060018	111060582	True	NM_005549,NR_003599	chr1,chr1	-,+	KCNA10,CYMP	1265,-36681
chr10:75188024-75188402	chr10	+	75188029	75188247	True	NM_001024593,NM_173348	chr10,chr10	-,+	ZMYND17,FAM149B1	5130,-260203
chr10:91463801-91464404	chr10	+	91463828	91464006	True	NR_026835,NM_016195	chr10,chr10	-,+	FLJ37201,KIF20B	-6143,-2513
chr7:137686693-137686989	chr7	+	137686752	137686934	True	NM_194071,NM_001190906	chr7,chr7	-,+	CREB3L2,AKR1D1	-16,74243
chr17:19773302-19774855	chr17	+	19773332	19774317	True	NM_152904,NM_014683,NM_001142610	chr17,chr17,chr17	+,-,-	SPECC1,ULK2,ULK2	216017,-2093,-2093
chr13:50342269-50342675	chr13	+	50342428	50342609	True	NM_002267,NR_003268	chr13,chr13	-,+	KPNA3,CTAGE10P	24509,121935
chr17:43970003-43971453	chr17_ctg5_hap1	-	896236	897385	False	NM_016835,NM_016834,NM_005910,NR_024559,NM_001123067,NM_001123066,NM_016841,NR_024560,NM_001203251,NM_001203252	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	-,-,-,+,-,-,-,-,-,-	MAPT,MAPT,MAPT,LOC100128977,MAPT,MAPT,MAPT,LOC100130148,MAPT,MAPT	-406,-406,-406,-1599,-406,-406,-406,-1812,-406,-406
chr17:43970003-43971453	chr17	+	43970202	43971492	True	NM_016835,NM_016834,NM_005910,NR_024559,NM_001123067,NM_001123066,NM_016841,NR_024560,NM_001203251,NM_001203252	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,-,+,+,+,+,+,+	MAPT,MAPT,MAPT,LOC100128977,MAPT,MAPT,MAPT,LOC100130148,MAPT,MAPT	255,255,255,1437,255,255,255,1656,255,255
chr1:203732509-203733576	chr1	+	203732886	203733596	True	NM_017773,NR_027902,NM_001136190	chr1,chr1,chr1	+,-,+	LAX1,C1orf157,LAX1	687,276846,687
chr7:19157224-19157466	chr7	+	19157249	19157473	True	NM_001204148,NM_000474	chr7,chr7	+,-	HDAC9,TWIST1	-608400,-30
chr10:123747925-123748433	chr10	+	123748060	123748426	True	NM_017615,NM_206861,NM_206862	chr10,chr10,chr10	-,+,+	NSMCE4A,TACC2,TACC2	-13317,262,262
chr5:140030457-140030995	chr5	+	140030456	140030760	True	NR_033697,NM_002488,NM_006083,NM_001185012,NR_037428	chr5,chr5,chr5,chr5,chr5	-,-,+,-,+	NDUFA2,NDUFA2,IK,NDUFA2,MIR3655	-3086,-3086,-3128,-3086,-3083
chr3:13460997-13461202	chr3	+	13461084	13461166	True	NM_024827,NM_024923	chr3,chr3	+,-	HDAC11,NUP210	60548,693
chr20:56068685-56070201	chr20	+	56068822	56070219	True	NM_002591,NM_080618	chr20,chr20	+,-	PCK1,CTCFL	65917,29986
chr5:125802361-125802835	chr5	+	125802427	125802632	True	NM_001146322,NM_001182	chr5,chr5	+,-	GRAMD3,ALDH7A1	-1693,128500
chr19:33208022-33209196	chr19	+	33208271	33208639	True	NM_001110822,NM_032139	chr19,chr19	+,-	TDRD12,ANKRD27	2039,-42169
chr7:55767618-55769428	chr7	+	55767706	55769214	True	NM_182633,NR_003949	chr7,chr7	+,-	ZNF713,FKBP9L	211116,3096
chr7:55767618-55769428	chr7	-	33026496	33026821	False	NM_007270,NR_003500	chr7,chr7	+,-	FKBP9,RP9P	-29543,-43714
chr18:13915598-13916186	chr18	+	13915598	13916131	True	NM_005913,NM_000529	chr18,chr18	+,-	MC5R,MC2R	-90116,-63
chr13:53424047-53424895	chr13	+	53424097	53424734	True	NR_031582,NM_032949,NM_002590	chr13,chr13,chr13	+,-,-	MIR759,PCDH8,PCDH8	-39963,-1322,-1322
chr1:152323647-152324097	chr1	+	152323690	152324098	True	NM_178438,NM_001014342	chr1,chr1	+,-	LCE5A,FLG2	159221,8434
chr10:134144884-134145205	chr10	+	134144884	134145190	True	NR_026559,NM_030626,NM_173575,NM_001143757,NM_001143759,NM_001143758	chr10,chr10,chr10,chr10,chr10,chr10	+,+,-,+,+,+	LRRC27,LRRC27,STK32C,LRRC27,LRRC27,LRRC27	5420,423,-23407,550,423,423
chr12:51319316-51319541	chr12	+	51319318	51319394	True	NM_014033,NM_001174130	chr12,chr12	+,-	METTL7A,SLC11A2	-835,83709
chr2:74681274-74682052	chr2	+	74681471	74682097	True	NM_001146158,NM_031288,NM_012477,NR_037849	chr2,chr2,chr2,chr2	-,+,+,+	MOGS,INO80B,WBP1,INO80B-WBP1	10490,52,3429,52
chr7:54272479-54273787	chr7	+	54272614	54273820	True	NM_182546,NR_004422	chr7,chr7	+,-	VSTM2A,HPVC1	336198,-2500
chr6:168606505-168607496	chr6	+	168606681	168607451	True	NM_214462,NM_030615	chr6,chr6	-,+	DACT2,KIF25	113001,-188188
chr6:4777244-4777480	chr6	+	4777281	4777529	True	NM_006638,NM_004824	chr6,chr6	-,+	RPP40,CDYL	226792,-652
chr6:34708906-34710471	chr6	+	34709098	34710184	True	NM_024294,NM_003093	chr6,chr6	-,+	C6orf106,SNRPC	-44473,14686
chr11:120194268-120195198	chr11	+	120194267	120195227	True	NM_001198674,NM_001198675,NM_001198672,NM_001198673,NM_001198670,NM_001198671,NM_012101,NM_174926	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,+,-,+	TMEM136,TMEM136,TMEM136,TMEM136,TMEM136,TMEM136,TRIM29,TMEM136	610,610,610,610,610,610,-185404,610
chr16:81077997-81079031	chr16	+	81077996	81079068	True	NM_015251,NM_001100873	chr16,chr16	+,-	ATMIN,C16orf46	-8591,31854
chr2:112813702-112813916	chr2	+	112813733	112813933	True	NM_022662,NM_032824	chr2,chr2	-,+	ANAPC1,TMEM87B	-171992,-984
chr4:122301952-122302185	chr4	+	122301954	122302098	True	NM_198179,NR_024365	chr4,chr4	-,+	QRFPR,LOC100192379	133,383641
chr13:37005192-37005499	chr13	+	37005194	37005493	True	NM_003914,NM_001142294,NM_001111046,NM_001111047,NM_001111045	chr13,chr13,chr13,chr13,chr13	+,-,+,+,+	CCNA1,SPG20,CCNA1,CCNA1,CCNA1	915,-60877,473,473,915
chr15:25478710-25478962	chr15	+	25478714	25479000	True	NR_003353,NR_003358,NR_003345,NR_003346,NR_003344,NR_003352,NR_003351,NR_003350,NM_130838,NR_003355,NR_003354,NR_003347,NR_003303,NR_003348,NR_003349	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,-,+,+,+,+,+,+	SNORD115-38,SNORD115-43,SNORD115-30,SNORD115-31,SNORD115-29,SNORD115-37,SNORD115-36,SNORD115-35,UBE3A,SNORD115-40,SNORD115-39,SNORD115-32,SNORD115-11,SNORD115-33,SNORD115-34	5984,2231,-8415,-6509,2231,4132,2231,393,171703,9760,7892,-4651,2231,-2780,-1231
chr3:131221885-131223688	chr3	+	131221890	131223554	True	NM_007208,NR_033268	chr3,chr3	-,+	MRPL3,NUDT16	-30,-121317
chr1:47016013-47016897	chr1	+	47016300	47016822	True	NM_001097611,NM_172225	chr1,chr1	-,+	KNCN,DMBX1	115,-43683
chrX:2747825-2748037	chrX	+	2747830	2747964	True	NM_001184703,NM_001184702,NM_001184704,NM_003918,NM_001079855,NM_001669	chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,-	GYG2,GYG2,GYG2,GYG2,GYG2,ARSD	-1018,-1018,-1018,-1018,-1018,99478
chr9:118270168-118270541	chr9	+	118270223	118270543	True	NM_017418,NM_002160	chr9,chr9	+,-	DEC1,TNC	-366181,-389737
chrY:26979751-26980022	chrY	+	26979801	26979931	True	NM_020364,NM_001005375,NM_001005785,NM_020420,NM_001005786	chrY,chrY,chrY,chrY,chrY	+,+,+,+,+	DAZ3,DAZ4,DAZ2,DAZ4,DAZ2	35,35,58,35,58
chrY:26979751-26980022	chrY	-	26959738	26959804	False	NM_020364,NM_001005375,NM_020420	chrY,chrY,chrY	-,+,-	DAZ3,DAZ4,DAZ4	-99,20162,-99
chrY:26979751-26980022	chrY	-	25345353	25345419	False	NM_020364,NM_001005375,NM_004081,NM_020420	chrY,chrY,chrY,chrY	+,-,-,-	DAZ3,DAZ4,DAZ1,DAZ4	20161,-99,-114,-99
chrY:26979751-26980022	chrY	+	25365415	25365481	False	NM_020364,NM_020420,NM_001005786,NM_001005785,NM_020363	chrY,chrY,chrY,chrY,chrY	+,+,+,+,+	DAZ3,DAZ4,DAZ2,DAZ2,DAZ2	99,99,122,122,122
chr16:1278421-1278718	chr16	+	1278662	1278734	True	NM_012467,NM_024164,NM_003294	chr16,chr16,chr16	-,-,+	TPSG1,TPSB2,TPSAB1	-3408,1501,11943
chr16:1278421-1278718	chr16	-	1292156	1292228	False	NM_024164,NM_003294	chr16,chr16	-,+	TPSB2,TPSAB1	-11971,-1529
chr16:1278421-1278718	chr16	-	1308412	1308484	False	NM_024164,NM_012217	chr16,chr16	-,+	TPSB2,TPSD1	-28227,-2190
chr12:49524251-49524813	chr12	+	49524295	49524833	True	NM_032704,NM_006082	chr12,chr12	+,-	TUBA1C,TUBA1B	134031,521
chr19:49439875-49440334	chr19	+	49439981	49440041	True	NM_003323,NM_014475	chr19,chr19	-,+	TULP2,DHDH	-37985,-3099
chr12:8789083-8790109	chr12	+	8789204	8789922	True	NM_020661,NM_020734	chr12,chr12	-,+	AICDA,RIMKLB	-23762,60595
chr19:18209407-18209910	chr19	+	18209466	18209882	True	NM_015016,NM_153701	chr19,chr19	+,-	MAST3,IL12RB1	-916,-11769
chr2:196536101-196536669	chr2	+	196536118	196536668	True	NM_020342,NM_018897	chr2,chr2	+,-	SLC39A10,DNAH7	-14318,396918
chr11:65480273-65480818	chr11	+	65480275	65480856	True	NM_182709,NM_006388,NM_182710,NM_032193	chr11,chr11,chr11,chr11	+,+,+,-	KAT5,KAT5,KAT5,RNASEH2C	-837,-837,-837,7603
chr10:118309729-118310754	chr10	+	118309919	118310795	True	NM_000936,NM_144661	chr10,chr10	+,-	PNLIP,C10orf82	-4549,118744
chr10:70882894-70883674	chr10	+	70882935	70883711	True	NM_001057,NM_001035260,NM_004896	chr10,chr10,chr10	-,+,+	TACR2,VPS26A,VPS26A	293013,196,196
chr7:97498321-97498560	chr7	+	97498361	97498585	True	NM_133436,NM_183356,NM_001178076,NM_001178077,NM_001178075,NM_001673,NM_013998	chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,-,+	ASNS,ASNS,ASNS,ASNS,ASNS,ASNS,TAC1	2952,3329,3329,2952,3329,3329,-137141
chr1:4057633-4058374	chr1	+	4057638	4058409	True	NR_024455,NM_207356	chr1,chr1	+,-	LOC100133612,C1orf174	-240721,-240781
chr2:238501478-238501767	chr2	+	238501478	238501563	True	NM_015893,NM_022449,NR_033308	chr2,chr2,chr2	+,-,-	PRLH,RAB17,RAB17	-26312,-1709,-1709
chr1:179734514-179735981	chr1	+	179734579	179735197	True	NM_173509,NM_001199260	chr1,chr1	+,-	FAM163A,TOR1AIP2	-22337,111794
chr12:130389050-130389327	chr12	+	130389123	130389363	True	NM_133448,NM_007197	chr12,chr12	-,+	TMEM132D,FZD10	-911,257640
chr19:18509401-18510016	chr19	+	18509444	18510063	True	NM_145256,NR_036156	chr19,chr19	-,+	LRRC25,MIR3189	-1029,-12123
chr10:76586510-76586889	chr10	+	76586521	76586937	True	NM_001003892,NM_012330	chr10,chr10	-,+	DUPD1,MYST4	231385,-193
chr1:13457046-13457487	chr1	+	13457392	13457467	True	NM_001099854,NM_001024661,NM_001010890	chr1,chr1,chr1	-,-,+	PRAMEF14,PRAMEF13,PRAMEF9	-4736,-4736,-36273
chr1:13457046-13457487	chr1	+	13678228	13678303	False	NM_001099854,NM_001010890	chr1,chr1	-,+	PRAMEF14,PRAMEF9	-4717,-36312
chr9:37033943-37034361	chr9	+	37033946	37034321	True	NM_016734,NR_036592	chr9,chr9	-,+	PAX5,LOC100506710	205,45571
chrX:51636109-51636360	chrX	+	51636191	51636307	True	NM_001005333,NR_003711,NM_006986	chrX,chrX,chrX	+,-,+	MAGED1,SNORA11D,MAGED1	390,170312,390
chr12:89922970-89923539	chr12	+	89923115	89923587	True	NR_037660,NM_172240,NM_001199781,NM_003774,NM_001199782,NR_028138,NR_037659,NM_001199777	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,-,-,-,-,+,-,-	POC1B,POC1B,POC1B-GALNT4,GALNT4,POC1B-GALNT4,LOC338758,POC1B,POC1B	-3771,-3076,-3076,-4532,-3076,179144,-3076,-3771
chr3:111718208-111718408	chr3	+	111718287	111718397	True	NM_013259,NM_001190259,NM_001008272,NM_001008273	chr3,chr3,chr3,chr3	+,-,+,+	TAGLN3,GCET2,TAGLN3,TAGLN3	-752,133805,-752,-331
chr18:65174506-65176124	chr18	+	65174608	65175831	True	NM_032160,NR_033921	chr18,chr18	-,+	DSEL,LOC643542	8191,7951
chr11:118902081-118902897	chr11	+	118902269	118902802	True	NR_037429,NM_001164280,NM_001164279,NM_001164278,NM_001467,NM_001164277	chr11,chr11,chr11,chr11,chr11,chr11	+,-,-,-,-,-	MIR3656,SLC37A4,SLC37A4,SLC37A4,SLC37A4,SLC37A4	-12667,-1991,-653,-653,-653,-653
chr19:12551159-12551470	chr19	+	12551167	12551461	True	NM_153358,NM_005815	chr19,chr19	+,-	ZNF791,ZNF443	170270,515
chr1:209883375-209884347	chr1	+	209883644	209884349	True	NM_005525,NM_000228	chr1,chr1	+,-	HSD11B1,LAMB3	-5504,-57824
chrX:2670822-2671866	chrY	-	14618252	14618302	False	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	155995,-84863
chrX:2670822-2671866	chrY	+	2620943	2621601	False	NR_003254,NM_003140	chrY,chrY	+,-	XGPY2,SRY	-659,34245
chrX:2670822-2671866	chrX	+	2670943	2671601	True	NM_001141919,NM_001141920,NR_003254,NR_037842,NM_175569	chrX,chrX,chrX,chrX,chrX	+,+,+,-,+	XG,XG,XGPY2,NCRNA00102,XG	-903,-903,-659,-137555,-903
chr18:28602978-28603815	chr18	+	28602986	28603856	True	NM_001941,NM_001942	chr18,chr18	-,+	DSC3,DSG1	18979,294195
chrX:69514919-69515232	chrX	+	69514929	69515038	True	NM_016484,NM_012310	chrX,chrX	-,+	PDZD11,KIF4A	-5131,-5110
chr4:666314-666627	chr4	+	666314	666389	True	NM_002477,NM_007100,NR_033743	chr4,chr4,chr4	+,-,-	MYL5,ATP5I,ATP5I	5321,1793,1793
chr4:26861582-26862241	chr4	+	26861624	26862068	True	NM_001169118,NM_001169117,NM_000730,NM_020860	chr4,chr4,chr4,chr4	+,+,-,+	STIM2,STIM2,CCKAR,STIM2	244,244,-369582,244
chr1:214452963-214453880	chr1	+	214452971	214453754	True	NM_020197,NM_005401	chr1,chr1	+,-	SMYD2,PTPN14	810,271328
chr10:11862946-11863508	chr10	+	11863002	11863371	True	NM_014688,NM_153256	chr10,chr10	-,+	USP6NL,C10orf47	-209323,2025
chr12:107721711-107722726	chr12	+	107721710	107722710	True	NM_001018072,NM_004075	chr12,chr12	+,-	BTBD11,CRY1	-9567,-234112
chr20:30170110-30170885	chr20	+	30170139	30170197	True	NM_001037500,NM_002165	chr20,chr20	-,+	DEFB124,ID1	-109323,22894
chr7:55922994-55924685	chr7	+	55923018	55923922	True	NM_182633,NM_207366	chr7,chr7	+,-	ZNF713,SEPT14	56408,6614
chr14:57755520-57757356	chr14	+	57755833	57757394	True	NR_026895,NM_006544	chr14,chr14	+,-	MUDENG,EXOC5	-20279,-20216
chr3:168849285-168851193	chr3	+	168849477	168851175	True	NR_030294,NM_005241	chr3,chr3	+,-	MIR551B,MECOM	-579886,12974
chr20:22557989-22558304	chr20	+	22558008	22558324	True	NM_021784,NM_153675,NR_001558,NM_001052	chr20,chr20,chr20,chr20	-,-,-,+	FOXA2,FOXA2,NCRNA00261,SSTR4	6827,7827,1006,457732
chr19:2237047-2237432	chr19	+	2237070	2237136	True	NR_031596,NM_007165,NM_018049	chr19,chr19,chr19	-,+,-	MIR1227,SF3A2,PLEKHJ1	-2922,-305,-742
chr6:84137450-84138836	chr6	+	84138152	84138706	True	NM_002395,NM_001170423	chr6,chr6	-,+	ME1,PRSS35	2290,83487
chr7:134260665-134260950	chr7	+	134260668	134260938	True	NM_001628,NM_001080538	chr7,chr7	-,+	AKR1B1,AKR1B15	-116780,-26876
chr7:134260665-134260950	chr7	+	134221898	134222169	False	NM_001628,NM_020299	chr7,chr7	-,+	AKR1B1,AKR1B10	-78010,-9611
chr11:94131042-94131650	chr11	+	94131042	94131668	True	NM_001199206,NM_016540	chr11,chr11	+,-	FOLR4,GPR83	-92290,2967
chr1:143912452-143912735	chr1	+	143912515	143912715	True	NM_207418,NR_034178	chr1,chr1	-,+	FAM72D,SRGAP2P2	480,3032
chr1:143912452-143912735	chr1	-	120839412	120839612	False	NM_001004340,NM_001100910	chr1,chr1	-,+	FCGR1B,FAM72B	96382,-460
chr1:143912452-143912735	chr1	-	206138884	206139084	False	NM_001123168,NM_001007544	chr1,chr1	+,-	FAM72A,C1orf186	-26,149613
chrX:105849396-105850343	chrX	+	105849831	105850389	True	NM_001184782,NM_018015,NM_001171706	chrX,chrX,chrX	+,+,-	CXorf57,CXorf57,RIPPLY1	4770,4770,296222
chr10:75915583-75917375	chr10	+	75915803	75917046	True	NM_001202450,NM_012095,NM_006721,NM_207012	chr10,chr10,chr10,chr10	+,-,+,-	ADK,AP3M1,ADK,AP3M1	-4911,-4977,-4911,-4977
chr18:63429986-63430206	chr18	+	63429992	63430243	True	NM_021153,NM_004361	chr18,chr18	-,+	CDH19,CDH7	841023,-11886
chr12:16666379-16666686	chr12	+	16666453	16666713	True	NM_018640,NM_145764	chr12,chr12	-,+	LMO3,MGST1	92768,-160153
chr16:3098083-3098616	chr16	+	3098301	3098569	True	NM_001103175,NM_022468	chr16,chr16	-,+	CCDC64B,MMP25	-12759,-1672
chr19:44175980-44177316	chr19	+	44176174	44176761	True	NM_001005376,NM_001005377,NM_019612,NM_002659	chr19,chr19,chr19,chr19	-,-,+,-	PLAUR,PLAUR,IRGC,PLAUR	-1676,-1676,43452,-1676
chr7:97840910-97841181	chr7	+	97840973	97841193	True	NM_015395,NM_177455	chr7,chr7	-,+	TECPR1,BHLHA15	40325,372
chr15:75626151-75626817	chr15	+	75626163	75626752	True	NR_030360,NM_017828	chr15,chr15	-,+	MIR631,COMMD4	19324,1621
chr16:78132247-78132603	chr16	+	78132249	78132458	True	NM_199355,NM_016373,NM_130791,NM_130844	chr16,chr16,chr16,chr16	-,+,+,+	ADAMTS18,WWOX,WWOX,WWOX	-663238,1092,1092,1092
chr13:57715002-57715240	chr13	+	57715009	57715275	True	NM_001130407,NM_001130406,NM_001130405,NM_001130404,NM_198441,NR_031628	chr13,chr13,chr13,chr13,chr13,chr13	+,+,+,+,+,-	PRR20E,PRR20D,PRR20C,PRR20B,PRR20A,MIR1297	-8,-8,-8,-8,-8,-2828826
chr13:57715002-57715240	chr13	+	57721579	57721845	False	NM_001130407,NM_001130406,NM_001130405,NM_001130404,NM_198441,NR_031628	chr13,chr13,chr13,chr13,chr13,chr13	+,+,+,+,+,-	PRR20E,PRR20D,PRR20C,PRR20B,PRR20A,MIR1297	-8,-8,-8,-8,-8,-2835396
chr13:57715002-57715240	chr13	+	57728152	57728418	False	NM_001130407,NM_001130406,NM_001130405,NM_001130404,NM_198441,NR_031628	chr13,chr13,chr13,chr13,chr13,chr13	+,+,+,+,+,-	PRR20E,PRR20D,PRR20C,PRR20B,PRR20A,MIR1297	-8,-8,-8,-8,-8,-2841969
chr13:57715002-57715240	chr13	+	57734723	57734989	False	NM_001130407,NM_001130406,NM_001130405,NM_001130404,NM_198441,NR_031628	chr13,chr13,chr13,chr13,chr13,chr13	+,+,+,+,+,-	PRR20E,PRR20D,PRR20C,PRR20B,PRR20A,MIR1297	-8,-8,-8,-8,-8,-2848540
chr13:57715002-57715240	chr13	+	57741288	57741554	False	NM_001130407,NM_001130406,NM_001130405,NM_001130404,NM_198441,NM_030932	chr13,chr13,chr13,chr13,chr13,chr13	+,+,+,+,+,-	PRR20E,PRR20D,PRR20C,PRR20B,PRR20A,DIAPH3	-8,-8,-8,-8,-8,2845839
chr10:32046505-32046738	chr10	+	32046528	32046750	True	NM_001174094,NM_018287	chr10,chr10	+,-	ZEB1,ARHGAP12	-436522,171070
chr8:66715104-66716863	chr8	+	66715114	66716542	True	NM_002603,NM_001145838	chr8,chr8	-,+	PDE7A,MTFR1	-13793,-133060
chr12:45610344-45610567	chr12	+	45610428	45610616	True	NM_001142679,NR_037144,NM_001025356,NM_001142680,NM_001204803	chr12,chr12,chr12,chr12,chr12	+,-,+,+,+	ANO6,PLEKHA8P1,ANO6,ANO6,ANO6	-709,-639,-709,-603,-709
chr8:59573887-59574465	chr8	+	59573892	59574500	True	NM_005625,NM_003580,NM_001144772	chr8,chr8,chr8	+,-,-	SDCBP,NSMAF,NSMAF	-108215,-1488,-1926
chr1:74617354-74618517	chr1	+	74617370	74618575	True	NM_001105659,NM_001199328	chr1,chr1	-,+	LRRIQ3,FPGT	45356,45320
chr5:166733302-166734796	chr5	+	166733320	166734668	True	NM_001122679,NR_029520	chr5,chr5	+,-	ODZ2,MIR103-1	-21529,1253361
chr8:81081363-81082027	chr8	+	81081511	81082082	True	NM_005079,NM_001025253,NM_001105539	chr8,chr8,chr8	-,-,+	TPD52,TPD52,ZBTB10	1815,1815,316365
chr4:25539299-25539643	chr4	+	25539520	25539592	True	NM_015187,NM_001177998	chr4,chr4	-,+	SEL1L3,SLC34A2	325072,117842
chr5:32173568-32173819	chr5	+	32173616	32173842	True	NM_022130,NM_178140	chr5,chr5	-,+	GOLPH3,PDZD2	633,-374636
chrX:48774286-48775084	chrX	+	48774554	48775056	True	NM_005660,NM_006875,NM_001167992,NM_001032289,NM_001042498	chrX,chrX,chrX,chrX,chrX	-,-,+,-,-	SLC35A2,PIM2,PQBP1,SLC35A2,SLC35A2	-5637,1407,-18830,-5621,-5319
chr11:63993909-63994264	chr11	+	63994113	63994299	True	NM_031472,NM_001160389,NM_001033678,NM_032344,NM_005528,NM_003377,NM_001160392,NM_001160393,NM_001160390,NM_001128613,NM_001128612	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,+,+,+,-,-,-,+,+	TRPT1,TRPT1,TRPT1,NUDT22,DNAJC4,VEGFB,TRPT1,TRPT1,TRPT1,NUDT22,NUDT22	-387,-387,-387,-426,3453,7966,-387,-772,-387,-426,-426
chr3:39424358-39424835	chr3	+	39424433	39424791	True	NM_001171174,NM_017875	chr3,chr3	-,+	CX3CR1,SLC25A38	-101207,23
chr7:28726847-28727153	chr7	+	28726915	28727203	True	NM_014817,NM_001011666	chr7,chr7	-,+	TRIL,CREB5	270882,-1255
chr2:101431530-101432417	chr2	+	101431578	101432443	True	NM_001102426,NM_002518	chr2,chr2	-,+	TBC1D8,NPAS2	335462,4169
chr6:116832233-116833606	chr6	+	116832635	116833623	True	NM_153711,NM_001139444	chr6,chr6	+,-	FAM26E,BET3L	122,33206
chr1:8940825-8941366	chr1	+	8940833	8941156	True	NM_001215,NM_001201483,NM_001428	chr1,chr1,chr1	+,-,-	CA6,ENO1,ENO1	64765,-9198,-1682
chr5:74163964-74165962	chr5	+	74164122	74165781	True	NM_015566,NM_014886	chr5,chr5	-,+	FAM169A,NSA2	-1507,-101070
chr10:100993595-100994000	chr10	+	100993800	100993906	True	NM_021828,NM_001166246,NM_020348,NM_001166244,NM_001166245	chr10,chr10,chr10,chr10,chr10	-,-,+,-,-	HPSE2,HPSE2,CNNM1,HPSE2,HPSE2	1776,1776,94949,1776,1776
chr14:64012916-64013673	chr14	+	64013109	64013678	True	NM_006246,NM_015180	chr14,chr14	-,+	PPP2R5E,SYNE2	-3030,306004
chr2:27988866-27989751	chr2	+	27988958	27989501	True	NM_014860,NM_004891,NM_145330	chr2,chr2,chr2	-,+,+	SUPT7L,MRPL33,MRPL33	-102509,5082,5082
chr18:29306692-29307957	chr18	+	29307240	29307992	True	NM_001034172,NM_000371	chr18,chr18	-,+	MCART2,TTR	32901,-135561
chr17:42264639-42264850	chr17	+	42264710	42264828	True	NM_178542,NM_001076674,NM_024107,NM_177441	chr17,chr17,chr17,chr17	-,+,+,+	C17orf65,TMUB2,TMUB2,TMUB2	-628,-407,-407,-187
chr7:81388911-81390623	chr7	+	81389401	81390651	True	NM_001010934,NM_001010932,NM_001010933,NM_001010931,NM_001127444,NM_000601	chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,+,-	HGF,HGF,HGF,HGF,CD36,HGF	8851,8851,8851,8851,-1113697,8851
chr1:24307214-24308965	chr1	+	24307255	24308374	True	NM_006625,NR_034035,NM_054016,NM_017761,NM_001191009,NM_001191006,NM_001191007,NM_001191005	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,-,-,-	SRSF10,SRSF10,SRSF10,PNRC2,SRSF10,SRSF10,SRSF10,SRSF10	-302,-302,-302,-21005,-302,-302,-302,-302
chr16:3550460-3550840	chr16	+	3550700	3550812	True	NM_015041,NM_024793,NM_001080524	chr16,chr16,chr16	+,+,-	CLUAP1,CLUAP1,C16orf90	150,9081,-5279
chr6:157097954-157098253	chr6	+	157097987	157098269	True	NM_020732,NM_018452,NM_017519	chr6,chr6,chr6	+,-,+	ARID1B,C6orf35,ARID1B	794,647034,794
chr17:41003722-41003968	chr17	+	41003867	41003927	True	NM_001158,NM_003734,NM_009590,NM_003766	chr17,chr17,chr17,chr17	+,+,+,-	AOC2,AOC3,AOC2,BECN1	-7309,-717,-7309,-27557
chr16:56223380-56224272	chr16	+	56223385	56224288	True	NM_020988,NR_026889,NR_027078,NM_138736	chr16,chr16,chr16,chr16	+,-,-,+	GNAO1,DKFZP434H168,LOC283856,GNAO1	962,4199,768,962
chr17:39870516-39871271	chr17	+	39870703	39871272	True	NM_001079870,NM_000805	chr17,chr17	-,+	HAP1,GAST	19676,-2142
chr4:81264922-81266600	chr4	+	81264992	81266366	True	NM_001145794,NM_152770	chr4,chr4	-,+	ANTXR2,C4orf22	-270515,-8177
chr16:77228985-77230392	chr16	+	77229112	77230328	True	NM_001129979,NM_014940,NM_199355	chr16,chr16,chr16	+,+,-	SYCE1L,MON1B,ADAMTS18	3020,-4327,238733
chr8:144654223-144654493	chr8	+	144654287	144654489	True	NM_145201,NM_024736,NM_001100878	chr8,chr8,chr8	-,+,-	NAPRT1,GSDMD,C8orf73	6074,-13861,489
chr16:739322-739760	chr16	+	739378	739796	True	NM_032259,NM_005861,NM_001005920	chr16,chr16,chr16	-,+,-	WDR24,STUB1,JMJD8	654,-9314,-4939
chr6:15979268-15979515	chr6	+	15979268	15979509	True	NM_013262,NR_036448	chr6,chr6	+,-	MYLIP,DTNBP1	149807,-315979
chr10:119133830-119134223	chr10	+	119133862	119134126	True	NM_173791,NM_003054	chr10,chr10	-,+	PDZD8,SLC18A2	861,-133329
chr20:25387838-25388131	chr20	+	25387840	25388057	True	NM_021067,NM_001042472	chr20,chr20	+,-	GINS1,ABHD12	265,-16222
chr7:158936636-158937090	chr7	+	158936715	158937024	True	NR_024394	chr7	+	LOC154822	-135721
chr10:112326460-112327536	chr10	+	112326466	112327295	True	NM_005871,NM_005445	chr10,chr10	-,+	SMNDC1,SMC3	-261759,153
chr15:75874807-75875702	chr15	+	75874854	75875751	True	NM_153271,NM_002833	chr15,chr15	+,-	SNX33,PTPN9	65596,-3229
chr11:65656150-65656512	chr11	+	65656153	65656411	True	NM_198897,NM_004214,NM_006848,NM_001335	chr11,chr11,chr11,chr11	-,-,+,+	FIBP,FIBP,CCDC85B,CTSW	-143,-143,1463,-8920
chr13:41496432-41496780	chr13	+	41496582	41496780	True	NR_030352,NR_003365	chr13,chr13	+,-	MIR621,SUGT1P3	-111731,-696
chr16:79639126-79639599	chr16	+	79639231	79639619	True	NM_005360,NM_130897,NM_001031804	chr16,chr16,chr16	-,+,-	MAF,DYNLRB2,MAF	-4609,935234,-4609
chr11:65029741-65030029	chr11	+	65029795	65030068	True	NM_002689,NM_001077241	chr11,chr11	+,-	POLA2,SLC25A45	-414,120125
chr2:26369019-26370058	chr2	+	26369197	26370097	True	NM_000182,NM_001168241	chr2,chr2	-,+	HADHA,FAM59B	97547,25862
chr5:161574416-161576156	chr5	+	161574910	161576086	True	NM_198904,NM_021911	chr5,chr5	+,-	GABRG2,GABRB2	-80313,-599780
chr9:32008692-32010457	chr9	+	32008779	32010309	True	NM_014314,NM_002197	chr9,chr9	-,+	DDX58,ACO1	516063,374291
chr8:145113634-145113845	chr8	+	145113662	145113728	True	NM_019037,NM_017570	chr8,chr8	+,-	EXOSC4,OPLAH	19793,1906
chr1:75208895-75210450	chr1	+	75208946	75210362	True	NR_027962,NM_001130043,NM_001130042,NM_001134759,NM_001889	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	TYW3,CRYZ,CRYZ,CRYZ,CRYZ	-10135,-9854,-9854,-9854,-9854
chr22:42487340-42487771	chr22	+	42487367	42487753	True	NM_002490,NR_034118	chr22,chr22	-,+	NDUFA6,LOC100132273	-479,-481
chr2:46925412-46925698	chr2	+	46925500	46925730	True	NM_144949,NM_173074,NM_014011	chr2,chr2,chr2	+,-,+	SOCS5,PIGF,SOCS5	618,-81249,368
chr2:128616364-128616631	chr2	+	128616481	128616618	True	NM_032740,NM_004805	chr2,chr2	+,-	SFT2D3,POLR2D	-157941,-752
chr1:36617568-36618342	chr1	+	36617692	36617814	True	NM_014408,NM_018067	chr1,chr1	-,+	TRAPPC3,MAP7D1	-2625,3988
chr20:33463794-33464052	chr20	+	33463839	33463977	True	NM_178026,NR_028046,NM_018677,NM_001076552	chr20,chr20,chr20,chr20	-,+,+,+	GGT7,ACSS2,ACSS2,ACSS2	-3178,-1124,350,350
chrX:100851949-100852686	chrX	+	100851949	100852424	True	NM_001009584,NM_016607	chrX,chrX	-,+	ARMCX6,ARMCX3	20618,25695
chr4:76931829-76932292	chr4	+	76931936	76932322	True	NM_002416,NM_001130017	chr4,chr4	-,+	CXCL9,ART3	-3295,14
chr11:118891892-118892785	chr11	+	118892014	118892525	True	NM_001028,NR_037429,NM_001164280,NM_001164279,NM_001164278,NM_016146,NM_001467,NM_001164277	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,+,-,-,-,+,-,-	RPS25,MIR3656,SLC37A4,SLC37A4,SLC37A4,TRAPPC4,SLC37A4,SLC37A4	-2957,-2418,7804,9142,9142,-2831,9142,9142
chr17:38575684-38576557	chr17	+	38575855	38576251	True	NM_001552,NM_001067	chr17,chr17	+,-	IGFBP4,TOP2A	23424,-1653
chr1:12908481-12909283	chr1	+	12908517	12909261	True	NM_001013631,NM_023014,NM_001146181	chr1,chr1,chr1	-,+,-	HNRNPCL1,PRAMEF2,LOC649330	45,7679,-280
chr9:98911994-98913131	chr9	+	98912177	98913054	True	NR_033838,NR_024129	chr9,chr9	+,-	LOC158435,NCRNA00092	-84107,-128140
chr13:114450706-114452011	chr13	+	114450906	114451786	True	NM_182614,NR_028064	chr13,chr13	+,-	FAM70B,LOC100130386	10429,2326
chr7:150435437-150437276	chr7	+	150435439	150437301	True	NM_001101311,NM_018384,NM_001162367	chr7,chr7,chr7	-,+,+	TMEM176B,GIMAP5,LOC100128542	60370,-1054,9522
chr22:24260979-24261551	chr22	+	24261018	24261244	True	NM_001080843,NM_002415	chr22,chr22	-,+	GSTT2B,MIF	42174,-24507
chr6:14885885-14886240	chr6	+	14885915	14886221	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	360305,777118
chr9:130564949-130565169	chr9	+	130564949	130565039	True	NM_001018078,NM_170600,NM_004957	chr9,chr9,chr9	+,-,+	FPGS,SH2D3C,FPGS	468,-23901,114
chr11:65124583-65125397	chr11	+	65124620	65125354	True	NM_145719,NM_001077241	chr11,chr11	+,-	TIGD3,SLC25A45	-2389,24838
chr17:55927611-55927869	chr17	+	55927621	55927867	True	NM_016070,NM_080677	chr17,chr17	-,+	MRPS23,DYNLL2	-188,232912
chr16:89893354-89893999	chr16	+	89893877	89893997	True	NM_032451,NM_001018112	chr16,chr16	+,-	SPIRE2,FANCA	909,-10812
chr6:99282819-99283049	chr6	+	99282866	99283096	True	NM_005604,NM_012160	chr6,chr6	+,-	POU3F2,FBXL4	-337,112803
chr17:6659458-6659693	chr17	+	6659489	6659736	True	NM_199139,NM_177550,NM_017523	chr17,chr17,chr17	+,-,+	XAF1,SLC13A5,XAF1	-384,-42749,-384
chr20:19875610-19876003	chr20	+	19875826	19876046	True	NM_016652,NM_018993	chr20,chr20	-,+	CRNKL1,RIN2	160694,-5674
chr9:19779982-19780356	chr9	+	19780105	19780213	True	NM_001193288,NM_020344,NM_001010887	chr9,chr9,chr9	-,-,+	SLC24A2,SLC24A2,ACER2	8434,8434,-371240
chr8:128099180-128099611	chrX	+	136066056	136066106	False	NM_054021,NM_000074	chrX,chrX	-,+	GPR101,CD40LG	47777,-335771
chr8:128099180-128099611	chr1	-	24995646	24995696	False	NM_005839,NM_001199012	chr1,chr1	+,-	SRRM1,C1orf201	-26103,-254059
chr8:128099180-128099611	chr8	+	128099203	128099621	True	NM_001159542,NR_024393	chr8,chr8	+,-	POU5F1B,LOC727677	328235,394813
chr7:75827721-75827936	chr7	+	75827775	75827889	True	NM_001110199,NM_016086	chr7,chr7	+,-	SRRM3,STYXL1	3326,-150454
chr16:4476298-4476964	chr16	+	4476419	4476904	True	NM_005147,NM_001135110,NM_024535,NM_001201473,NM_001201472,NM_001201479	chr16,chr16,chr16,chr16,chr16,chr16	+,+,-,-,-,-	DNAJA3,DNAJA3,CORO7,CORO7,CORO7,CORO7-PAM16	-612,-612,-9457,-9457,-9457,-9457
chr7:152156665-152157012	chr7	+	152156668	152157056	True	NM_170606,NR_027387	chr7,chr7	-,+	MLL3,LOC100128822	-23578,4152
chr1:6418017-6418265	chr1	+	6418234	6418306	True	NM_031475,NM_181865,NM_181866	chr1,chr1,chr1	+,-,-	ESPN,ACOT7,ACOT7	66541,2508,748
chr5:118688295-118689972	chr5	+	118688459	118689955	True	NM_173666,NM_014350	chr5,chr5	-,+	DTWD2,TNFAIP8	-364219,1640
chr15:101400228-101401559	chr15	+	101400391	101401599	True	NM_001040616,NM_000693	chr15,chr15	-,+	LINS,ALDH1A3	-257946,18409
chr4:122852295-122853402	chr4	+	122852557	122853321	True	NM_003305,NM_005033	chr4,chr4	-,+	TRPC3,EXOSC9	999,-130142
chr19:58547078-58548212	chr19	+	58547157	58547679	True	NM_182572,NM_025027	chr19,chr19	+,-	ZSCAN1,ZNF606	-1776,-32443
chr1:16330331-16330684	chr1	+	16330365	16330719	True	NM_014424,NM_178840	chr1,chr1	-,+	HSPB7,C1orf64	14616,11
chr2:239336180-239336426	chr2	+	239336312	239336440	True	NR_037809,NM_001040445	chr2,chr2	-,+	LOC151171,ASB1	127750,-737
chr19:18685189-18685820	chr19	+	18685371	18685801	True	NM_012181,NM_001033930,NM_003333	chr19,chr19,chr19	-,+,+	FKBP8,UBA52,UBA52	-30988,-2808,-2808
chr14:60976159-60976609	chr14	+	60976254	60976514	True	NM_007374,NM_174978	chr14,chr14	+,-	SIX6,C14orf39	-367,-23490
chrX:44401807-44402066	chrX	+	44401976	44402044	True	NM_022076,NM_173794	chrX,chrX	+,-	DUSP21,FUNDC1	301204,227
chr2:119916993-119917383	chr2	+	119917288	119917422	True	NM_001008410,NM_182528	chr2,chr2	+,-	STEAP3,C1QL2	63961,-817
chr2:173600922-173601131	chr2	+	173600963	173601149	True	NR_026995,NM_007023	chr2,chr2	-,+	LOC91149,RAPGEF4	-29,-489
chr7:17362758-17364398	chr7	+	17363169	17364058	True	NM_001621,NM_176813	chr7,chr7	+,-	AHR,AGR3	-24944,-441556
chr6:28052150-28053467	chr6	+	28052447	28053459	True	NM_003447,NR_002936,NR_024063	chr6,chr6,chr6	+,-,+	ZNF165,LOC222699,ZSCAN12P1	-4024,133298,5469
chr19:50167896-50168098	chr19	+	50167900	50168136	True	NM_001040668,NM_001197128,NM_001571,NM_001197126,NM_001197127,NM_138639,NM_001197125,NM_001197124,NM_001197123,NM_001197122	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,-,-,-,+,-,-,-,-	BCL2L12,IRF3,IRF3,IRF3,IRF3,BCL2L12,IRF3,IRF3,IRF3,IRF3	262,1046,1046,1046,1046,262,1046,1046,1046,1046
chr15:41096969-41097599	chr15	+	41097204	41097309	True	NM_018163,NM_001077268	chr15,chr15	-,+	DNAJC17,ZFYVE19	2424,1964
chr19:1207233-1207632	chr19	+	1207291	1207633	True	NM_000455,NM_152769	chr19,chr19	+,-	STK11,C19orf26	-1544,30407
chr16:57479847-57480317	chr16	+	57480064	57480189	True	NM_020313,NM_020312	chr16,chr16	-,+	CIAPIN1,COQ9	1237,1147
chr3:49055433-49055693	chr3	+	49055466	49055660	True	NM_001009996,NM_199074,NM_199073,NR_029948,NM_199070,NR_029690,NM_018114,NM_199069	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,+,-,+,-,-,+	DALRD3,NDUFAF3,NDUFAF3,MIR425,NDUFAF3,MIR191,DALRD3,NDUFAF3	407,2247,2957,2057,3413,2532,2857,3413
chr15:68353111-68354029	chr15	+	68353464	68354056	True	NM_016166,NM_001031733	chr15,chr15	+,-	PIAS1,CALML4	-6948,144442
chr17:31201660-31203225	chr17	+	31201810	31203208	True	NM_001033504,NM_015194	chr17,chr17	+,-	TMEM98,MYO1D	51719,752
chr2:10589282-10590078	chr2	+	10589336	10590016	True	NM_002539,NM_134421,NR_028374	chr2,chr2,chr2	-,+,-	ODC1,HPCAL1,SNORA80B	-883,-145566,-2361
chr3:14584743-14586083	chr3	+	14584809	14585931	True	NM_016474,NM_001080423	chr3,chr3	+,-	C3orf19,GRIP2	107321,-1221
chr5:162931935-162932563	chr5	+	162931958	162932445	True	NM_182796,NM_145266,NM_013283	chr5,chr5,chr5	+,-,+	MAT2B,NUDCD2,MAT2B	-1783,-44815,139
chr8:88886333-88886683	chr8	+	88886334	88886450	True	NM_152418,NM_173538	chr8,chr8	-,+	DCAF4L2,CNBD1	-38,-1007709
chr17:57287067-57287361	chr17	+	57287297	57287408	True	NM_182620,NM_018149	chr17,chr17	-,+	SKA2,C17orf71	-54497,-3
chr12:56839895-56840884	chr12	+	56839983	56840724	True	NM_003920,NM_012064,NM_207344	chr12,chr12,chr12	-,-,+	TIMELESS,MIP,SPRYD4	2536,7771,21576
chr15:41048900-41049611	chr15	+	41048998	41049476	True	NM_018145,NM_005258	chr15,chr15	-,+	FAM82A2,GCHFR	-1540,6808
chr10:103452475-103453815	chr10	+	103452946	103453769	True	NR_036114,NM_022039	chr10,chr10	+,-	MIR3158-1,FBXW4	-91823,1030
chr2:75056792-75058418	chr2	+	75056913	75058321	True	NM_138804,NM_000189	chr2,chr2	-,+	C2orf65,HK2	-181749,1460
chr17:42093699-42094385	chr17	+	42093874	42094204	True	NM_032376,NM_153006	chr17,chr17	-,+	TMEM101,NAGS	-1529,-11893
chr1:160615235-160616765	chr1	+	160615246	160616635	True	NM_021181,NM_003037	chr1,chr1	+,-	SLAMF7,SLAMF1	92441,496
chr17:71253907-71254599	chr17	+	71253907	71254155	True	NM_001129885,NM_017941	chr17,chr17	-,+	CPSF4L,C17orf80	3914,-25182
chr19:19029404-19030116	chr19	+	19029536	19030114	True	NM_019070,NM_199444,NR_033677,NM_199442,NM_007263	chr19,chr19,chr19,chr19,chr19	+,-,+,-,-	DDX49,COPE,DDX49,COPE,COPE	369,135,369,135,135
chr20:2279636-2280330	chr20	+	2279641	2280373	True	NR_003684,NM_003245	chr20,chr20	-,+	SNORD119,TGM3	163370,-3079
chr8:70744335-70744730	chr8	+	70744409	70744721	True	NM_001128206,NM_030958,NM_001146008,NM_001146009	chr8,chr8,chr8,chr8	+,-,-,-	SULF1,SLCO5A1,SLCO5A1,SLCO5A1	-339432,2628,954,733
chr14:23652418-23652823	chr14	+	23652427	23652796	True	NM_012244,NM_017924	chr14,chr14	-,+	SLC7A8,C14orf119	103,-87690
chr19:12725700-12726310	chr19	+	12726088	12726325	True	NM_153358,NM_020714	chr19,chr19	+,-	ZNF791,ZNF490	-4407,-4465
chr20:30326544-30326866	chr20	+	30326543	30326901	True	NM_012112,NM_138578	chr20,chr20	+,-	TPX2,BCL2L1	2,-15887
chr19:35940978-35941843	chr19	+	35941027	35941836	True	NM_005306,NM_207392	chr19,chr19	+,-	FFAR2,KRTDAP	-461,39577
chr1:109255510-109256520	chr1	+	109255532	109256423	True	NM_144584,NM_001144937	chr1,chr1	-,+	HENMT1,FNDC7	-51384,-27
chr2:64750855-64751140	chr2	+	64750854	64751178	True	NM_014755,NM_001002243,NM_017657,NM_203437	chr2,chr2,chr2,chr2	-,+,+,+	SERTAD2,AFTPH,AFTPH,AFTPH	129918,260,260,260
chr7:135409167-135410684	chr7	+	135409378	135410324	True	NM_001130929,NM_012450	chr7,chr7	+,-	PL-5283,SLC13A4	-62208,2659
chrX:18447777-18449632	chrX	+	18448076	18449526	True	NR_033717,NM_003159	chrX,chrX	-,+	SCML2,CDKL5	-75232,-4409
chr3:128838176-128838487	chr3	+	128838290	128838536	True	NM_198490,NM_001204888,NM_001204885,NM_001204884,NM_001204887,NM_001204886,NM_001204883,NM_000174	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,-,-,-,+	RAB43,RAB43,RAB43,RAB43,RAB43,RAB43,RAB43,GP9	2161,2161,2279,2371,2161,2161,2507,-58696
chr11:111779646-111781267	chr11	+	111779814	111781016	True	NR_037651,NM_001885,NM_080659,NM_001541	chr11,chr11,chr11,chr11	+,-,+,+	HSPB2-C11ORF52,CRYAB,C11orf52,HSPB2	2443,1507,8584,2443
chr21:33784887-33785125	chr21	+	33784886	33785115	True	NM_058187,NM_014825	chr21,chr21	+,-	C21orf63,URB1	-185,-19574
chr3:42702180-42703373	chr3	+	42702250	42703128	True	NM_145166,NR_027753	chr3,chr3	+,-	ZBTB47,HHATL	-7125,39935
chr22:38220656-38220941	chr22	+	38220709	38220971	True	NM_138797,NM_003614	chr22,chr22	-,+	ANKRD54,GALR3	19432,-1371
chr5:5420135-5421073	chr5	+	5420353	5421024	True	NM_015325,NR_028351	chr5,chr5	+,-	KIAA0947,FLJ33360	1782,916437
chr19:39389854-39390078	chr19	+	39389872	39390024	True	NM_002503,NM_030593,NM_001001716,NM_012237,NR_034146,NM_001193286	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,-,-,-	NFKBIB,SIRT2,NFKBIB,SIRT2,SIRT2,SIRT2	590,528,590,489,-5077,528
chr11:102962974-102964443	chr11	+	102963014	102964191	True	NM_001080463,NM_032299	chr11,chr11	+,-	DYNC2H1,DCUN1D5	15968,-70
chr3:197474961-197476732	chr3	+	197475221	197476516	True	NM_032288,NM_001145642,NR_027840,NM_001011537	chr3,chr3,chr3,chr3	+,-,+,+	FYTTD1,KIAA0226,FYTTD1,FYTTD1	107,102,744,-93
chr20:48526658-48526898	chr20	+	48526770	48526920	True	NM_006038,NM_001135773,NM_018683	chr20,chr20,chr20	-,-,+	SPATA2,SPATA2,RNF114	5210,3406,25993
chr11:208232-208746	chr11	+	208248	208680	True	NM_016526,NM_001098787,NM_021932	chr11,chr11,chr11	-,-,+	BET1L,BET1L,RIC8A	-826,-826,53
chr10:89075558-89076075	chr10	+	89075855	89076121	True	NR_024397,NR_029408	chr10,chr10	-,+	LOC728190,LOC439994	26244,26046
chr10:89075558-89076075	chr10	+	81553687	81553849	False	NR_029407,NM_003019	chr10,chr10	+,-	LOC642361,SFTPD	31808,155062
chr5:139939826-139940286	chr5	+	139939853	139940169	True	NM_133172,NM_001035235,NM_133174,NM_133173,NM_080670,NM_006051	chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,+,-	APBB3,SRA1,APBB3,APBB3,SLC35A4,APBB3	4070,-2175,4070,4070,4250,4070
chr2:39103496-39104329	chr2	+	39103509	39104257	True	NM_001145450,NM_198963	chr2,chr2	+,-	MORN2,DHX57	-457,-488
chr3:125898265-125898720	chr3	+	125898408	125898762	True	NM_012190,NM_001012337	chr3,chr3	-,+	ALDH1L1,ROPN1B	773,-210431
chr4:156607555-156609095	chr4	+	156607695	156609023	True	NM_001130684,NM_017419	chr4,chr4	+,-	GUCY1A3,ACCN5	-18940,178452
chr4:71244198-71245144	chr4	+	71244476	71245000	True	NM_144646,NM_006685	chr4,chr4	-,+	IGJ,SMR3B	287404,3794
chr18:55013712-55014961	chr18	+	55013854	55014990	True	NM_015879,NM_000140	chr18,chr18	+,-	ST8SIA3,FECH	4730,239029
chr9:84678134-84679255	chr9	+	84678292	84679058	True	NM_005077,NM_001001670	chr9,chr9	-,+	TLE1,FAM75D1	-374696,-74656
chr7:80114942-80116016	chr7	+	80115149	80115644	True	NM_001102386,NM_001001547	chr7,chr7	-,+	GNAT3,CD36	25663,115859
chr16:22015083-22015287	chr16	+	22015098	22015324	True	NM_173806,NR_033694,NM_001164579	chr16,chr16,chr16	-,-,+	PDZD9,PDZD9,C16orf52	-2667,-2667,4131
chr2:190305851-190306117	chr2	+	190305851	190306111	True	NM_032168,NM_014585	chr2,chr2	+,-	WDR75,SLC40A1	47,139476
chrX:15353985-15355855	chrX	+	15354232	15355844	True	NR_033835,NR_033836,NM_020473,NM_002641,NM_203281	chrX,chrX,chrX,chrX,chrX	-,-,-,-,+	PIGA,PIGA,PIGA,PIGA,BMX	-556,-556,-556,-556,163055
chr11:5539370-5539884	chr11	+	5539459	5539931	True	NM_001005163,NM_145053,NM_017481	chr11,chr11,chr11	+,-,-	OR52D1,UBQLNL,UBQLN3	-29602,-1503,-8306
chrX:54950179-54950942	chrX	+	54950182	54950898	True	NM_002625,NM_001039705,NM_177556,NM_016157	chrX,chrX,chrX,chrX	-,+,+,+	PFKFB1,TRO,TRO,TRO	69663,-2985,-2985,-2985
chr2:127956648-127956961	chr2	+	127956943	127957005	True	NM_001001665,NM_000312	chr2,chr2	-,+	CYP27C1,PROC	6388,218990
chr4:57303933-57304758	chr4	+	57304031	57304406	True	NM_001079524,NM_001079525,NM_006452,NM_002703	chr4,chr4,chr4,chr4	+,+,+,-	PAICS,PAICS,PAICS,PPAT	-1826,-1826,-2180,-2229
chr9:135959101-135959656	chr9	+	135959129	135959575	True	NR_001275,NM_006266	chr9,chr9	+,-	CELP,RALGDS	-1254,37036
chr9:135959101-135959656	chr9	+	135943645	135943695	False	NM_001807,NM_006266	chr9,chr9	+,-	CEL,RALGDS	-6331,52916
chr6:56715131-56715576	chr6	+	56715272	56715596	True	NM_152731,NM_001723	chr6,chr6	+,-	BEND6,DST	104176,-207578
chr13:47370384-47370834	chr13	+	47370398	47370732	True	NM_001164213,NM_001984	chr13,chr13	+,-	LRCH1,ESD	-243158,685
chr2:207671853-207673459	chr2	+	207672556	207673360	True	NR_036077,NR_036078	chr2,chr2	-,+	MIR3130-1,MIR3130-2	-24524,-24652
chr16:4839485-4840579	chr16	+	4839751	4840390	True	NR_029454,NR_029455,NR_029453,NM_001154458,NM_144605	chr16,chr16,chr16,chr16,chr16	+,+,+,-,-	LOC440335,LOC440335,LOC440335,SEPT12,SEPT12	-1347,4988,-1406,-1352,-1352
chr7:99165683-99165964	chr7	+	99165711	99165885	True	NM_001009958,NM_145111,NM_001009960,NM_138494,NM_001085368,NM_001083956,NM_024061,NM_001085367,NM_001085366	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,-,+,+,+,+,+,+,+	ZNF655,FAM200A,ZNF655,ZNF655,ZNF655,ZNF655,ZNF655,ZNF655,ZNF655	-9324,-15954,-9324,-9727,-9324,-9727,-9727,-9324,-9727
chr1:36615408-36616515	chr1	+	36615424	36616128	True	NM_014408,NM_018067	chr1,chr1	-,+	TRAPPC3,MAP7D1	-357,5674
chr4:70504748-70505963	chr4	+	70504845	70505995	True	NM_001105677,NM_006798,NM_001025104	chr4,chr4,chr4	-,-,+	UGT2A2,UGT2A1,CSN1S1	11,7477,290803
chr6:128825743-128826339	chr6	+	128825747	128826092	True	NM_002844,NM_000426	chr6,chr6	-,+	PTPRK,LAMA2	15784,378193
chr3:112360752-112361000	chr3	+	112360755	112361017	True	NM_017945,NM_199511,NM_199512	chr3,chr3,chr3	+,-,-	SLC35A5,CCDC80,CCDC80	-79911,-778,-778
chr4:110834651-110835174	chr4	+	110834664	110835222	True	NM_001178131,NM_001178130,NM_001963,NM_000204	chr4,chr4,chr4,chr4	+,+,+,-	EGF,EGF,EGF,CFI	-680,-680,-680,-111329
chr1:19972045-19972251	chr1	+	19972059	19972279	True	NM_001204085,NM_001204084,NM_181719,NM_001204086,NM_182744,NM_005380	chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,+,+,+	NBL1,NBL1,TMCO4,NBL1,NBL1,NBL1	-244,-1902,154181,-20,-2387,-1303
chr21:44861272-44861491	chr21	+	44861330	44861514	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	8389,-14328
chr1:107687416-107688805	chr1	+	107687473	107688827	True	NM_001113226,NM_001113228,NM_001079874,NM_014917	chr1,chr1,chr1,chr1	+,+,-,+	NTNG1,NTNG1,VAV3,NTNG1	-4902,-4902,542361,-4786
chr20:32891024-32891251	chr20	+	32891050	32891226	True	NM_001672,NM_000687,NM_001161766	chr20,chr20,chr20	+,-,-	ASIP,AHCY,AHCY	-42930,39,8432
chr1:6682984-6683632	chr1	+	6682983	6683640	True	NM_014851,NM_153812,NM_001195752,NM_001195753,NM_138350	chr1,chr1,chr1,chr1,chr1	-,+,+,+,+	KLHL21,PHF13,THAP3,THAP3,THAP3	-20054,-9279,1569,1284,1569
chr12:102455015-102455425	chr12	+	102455033	102455449	True	NM_017915,NM_016053	chr12,chr12	+,-	C12orf48,CCDC53	58506,500
chr18:48346019-48346729	chr18	+	48346032	48346694	True	NM_001168335,NM_031939,NM_001127176,NM_001127175,NM_001127174	chr18,chr18,chr18,chr18,chr18	+,-,-,-,-	ME2,MRO,MRO,MRO,MRO	58737,-82,-82,-82,5110
chr8:145704236-145704594	chr8	+	145704395	145704617	True	NM_003923,NM_145754	chr8,chr8	-,+	FOXH1,KIFC2	-2677,-12708
chr12:6745876-6746249	chr12	+	6745880	6746122	True	NM_001164094,NM_001142961,NM_020400	chr12,chr12,chr12	+,-,-	COPS7A,LPAR5,LPAR5	87027,-5065,-583
chr4:85774205-85774482	chr4	+	85774249	85774333	True	NM_014991,NR_015359	chr4,chr4	-,+	WDFY3,NCRNA00247	113261,113637
chr7:36428754-36429130	chr7	+	36429106	36429178	True	NM_018685,NM_001100425	chr7,chr7	+,-	ANLN,KIAA0895	253,606
chr14:52732098-52733697	chr14	+	52732129	52733292	True	NM_007361,NM_000953	chr14,chr14	-,+	NID2,PTGDR	-196183,1138
chr5:132300201-132300650	chr5	+	132300201	132300533	True	NM_014423,NM_002154	chr5,chr5	-,+	AFF4,HSPA4	-847,87128
chr8:38989503-38991299	chr8	+	38989702	38990954	True	NM_078473,NM_145004	chr8,chr8	-,+	TM2D2,ADAM32	-135661,-24710
chr8:120428690-120428922	chr8	+	120428701	120428821	True	NM_002514,NM_001040092	chr8,chr8	+,-	NOV,ENPP2	-200,222335
chr8:49637713-49638217	chr8	+	49637780	49638092	True	NM_024593,NR_024605,NM_001007176,NM_001142857	chr8,chr8,chr8,chr8	-,-,+,-	EFCAB1,EFCAB1,C8orf22,EFCAB1	9836,9836,346810,9836
chr16:4677146-4677644	chr16	+	4677189	4677517	True	NM_001142289,NM_001142291,NM_001142290,NM_015246,NM_145253	chr16,chr16,chr16,chr16,chr16	+,+,+,+,-	MGRN1,MGRN1,MGRN1,MGRN1,FAM100A	-2422,-2422,-2422,-2422,-12262
chr1:114491550-114492515	chr1	+	114491836	114492208	True	NM_181358,NM_198269,NM_006594	chr1,chr1,chr1	+,+,-	HIPK1,HIPK1,AP4B1	4290,1558,-44095
chr16:216242-216468	chr16	+	216285	216483	True	NM_001077350,NM_001003938,NM_000517	chr16,chr16,chr16	-,+,+	NPRL3,HBM,HBA2	-27613,-363,6362
chr12:122032413-122033047	chr12	+	122032816	122032996	True	NM_032590,NM_032790	chr12,chr12	-,+	KDM2B,ORAI1	-13896,31458
chr1:110995081-110995871	chr1	+	110995206	110995926	True	NM_032414,NM_006402	chr1,chr1	+,-	PROK1,HBXIP	-1470,-44660
chr19:1939728-1940203	chr19	+	1940019	1940157	True	NR_033400,NM_001319	chr19,chr19	-,+	C19orf34,CSNK1G2	14441,1003
chr14:75226372-75227654	chr14	+	75226433	75227628	True	NM_019589,NM_001039479	chr14,chr14	+,-	YLPM1,KIAA0317	2440,-46626
chr14:81377631-81378277	chr14	+	81377881	81378293	True	NM_152446,NM_001018036	chr14,chr14	-,+	C14orf145,TSHR	27641,43575
chr7:6049436-6050238	chr7	+	6049813	6050062	True	NM_006303,NR_003085,NM_000535	chr7,chr7,chr7	+,-,-	AIMP2,PMS2,PMS2	-992,-1076,-1076
chr19:7563917-7564894	chr19	+	7564379	7564585	True	NM_198534,NM_080662	chr19,chr19	+,-	C19orf45,PEX11G	-1985,-10474
chr5:57878981-57879387	chr5	+	57879026	57879382	True	NM_006622,NM_138453	chr5,chr5	-,+	PLK2,RAB3C	-123113,-138
chr20:823775-824502	chr20	+	823779	824448	True	NM_031424,NM_001042353,NM_207121,NM_015985	chr20,chr20,chr20,chr20	+,+,+,-	FAM110A,FAM110A,FAM110A,ANGPT4	836,-9476,-7121,72562
chr14:105071271-105071678	chr14	+	105071316	105071534	True	NM_207379,NM_001008404	chr14,chr14	-,+	TMEM179,C14orf180	-219,-25311
chr5:32175848-32176315	chr5	+	32175921	32176121	True	NM_022130,NM_178140	chr5,chr5	-,+	GOLPH3,PDZD2	-1496,-376946
chr16:72110221-72110991	chr16	+	72110455	72110905	True	NM_020995,NM_017853	chr16,chr16	+,-	HPR,TXNL4B	-13381,16684
chr11:45307543-45307769	chr11	+	45307566	45307778	True	NM_020826,NM_020229	chr11,chr11	-,+	SYT13,PRDM11	156,-192053
chr14:21537352-21537677	chr14	+	21537421	21537669	True	NM_016423,NM_018071	chr14,chr14	-,+	ZNF219,ARHGEF40	29189,857
chrX:71353880-71354660	chrX	+	71353930	71354696	True	NM_207422,NM_001024455	chrX,chrX	+,-	FLJ44635,RGAG4	9337,-2179
chr7:76036850-76038188	chr7	+	76037074	76038222	True	NM_080744,NM_007155	chr7,chr7	-,+	SRCRB4D,ZP3	840,-10285
chrX:105858360-105860343	chrX	+	105858380	105860046	True	NM_001184782,NM_018015,NM_001171706	chrX,chrX,chrX	+,+,-	CXorf57,CXorf57,RIPPLY1	-3271,-3271,286578
chrX:48933553-48933907	chrX	+	48933661	48933815	True	NM_007213,NM_001163323,NM_001029896	chrX,chrX,chrX	-,+,-	PRAF2,CCDC120,WDR45	-1999,-17189,3799
chr12:20892436-20893160	chr12	+	20892676	20893174	True	NM_021094,NM_017435	chr12,chr12	-,+	SLCO1A2,SLCO1C1	594709,-44328
chr9:5716535-5717500	chr9	+	5716645	5717516	True	NM_024896,NM_020829	chr9,chr9	-,+	ERMP1,KIAA1432	115616,-60113
chr12:52774145-52775174	chr12	+	52774628	52775028	True	NM_033045,NM_002284	chr12,chr12	-,+	KRT84,KRT86	4439,-79030
chr15:98503378-98503591	chr15	+	98503390	98503608	True	NM_183376,NR_024173	chr15,chr15	+,-	ARRDC4,LOC91948	324,-85731
chr14:88456483-88457613	chr14	+	88456598	88457388	True	NM_001037525,NM_001201402,NM_001201401,NM_000153,NM_003608	chr14,chr14,chr14,chr14,chr14	-,-,-,-,+	GALC,GALC,GALC,GALC,GPR65	2277,2671,2277,2277,14079
chr6:135504601-135504842	chr6	+	135504620	135504790	True	NM_001161658,NM_001161659,NM_001161660,NM_001130173,NM_001130172,NM_001161656,NM_001161657,NM_001145207,NM_005375	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	+,+,+,+,+,+,+,-,+	MYB,MYB,MYB,MYB,MYB,MYB,MYB,HBS1L,MYB	-2218,-2218,-2218,-2218,-2218,-2218,-2218,-128584,-2218
chr7:148937269-148938138	chr7	+	148937286	148938158	True	NM_012256,NM_001001661	chr7,chr7	+,-	ZNF212,ZNF425	-595,-113848
chr9:138454880-138455887	chr9	+	138454930	138455817	True	NM_144654,NM_002571,NM_001018049	chr9,chr9,chr9	-,+,+	C9orf116,PAEP,PAEP	-63169,-1377,-1377
chr19:41101527-41101795	chr19	+	41101560	41101627	True	NM_001042544,NM_003573,NM_004756,NM_001042545	chr19,chr19,chr19,chr19	+,+,-,+	LTBP4,LTBP4,NUMBL,LTBP4	1513,-2539,94984,5649
chr2:68753069-68754026	chr2	+	68753219	68753657	True	NM_173545,NM_001024680	chr2,chr2	+,-	APLF,FBXO48	-58586,-58829
chrX:23093830-23094461	chr7	-	121012164	121018997	False	NM_057168,NM_001040020	chr7,chr7	+,-	WNT16,FAM3C	-49908,24258
chrX:23093830-23094461	chrX	+	23093862	23094359	True	NM_182699,NM_001033583	chrX,chrX	+,-	DDX53,ACOT9	-75826,667099
chr1:23748980-23749414	chr1	+	23748981	23749349	True	NR_033691,NM_003196	chr1,chr1	+,-	C1orf213,TCEA3	-53321,1962
chr15:59040692-59041116	chr15	+	59040779	59041071	True	NM_001040450,NM_001110	chr15,chr15	+,-	FAM63B,ADAM10	22321,1156
chr5:153856644-153857192	chr5	+	153856763	153857175	True	NM_004821,NR_024084	chr5,chr5	-,+	HAND1,SAP30L	699,-31298
chr12:100594560-100594765	chr12	+	100594629	100594787	True	NM_022496,NR_024261	chr12,chr12	+,-	ACTR6,GOLGA2B	-106,-27508
chr1:169971278-169972553	chr1	+	169971298	169972488	True	NM_001136107,NM_001204517	chr1,chr1	+,-	METTL11B,KIFAP3	142699,65633
chr13:102105984-102106202	chr13	+	102105993	102106239	True	NM_052867,NM_004791	chr13,chr13	-,+	NALCN,ITGBL1	-37180,-1078
chr9:80910289-80911471	chr9	+	80910367	80911461	True	NM_002072,NM_021154,NM_058179	chr9,chr9,chr9	-,+,+	GNAQ,PSAT1,PSAT1	-264148,597,597
chr11:130030145-130030725	chr11	+	130030306	130030728	True	NM_014155,NM_021978	chr11,chr11	-,+	ZBTB44,ST14	153929,-675
chr19:42571649-42572653	chr19	+	42571888	42572564	True	NM_022752,NM_002088	chr19,chr19	+,-	ZNF574,GRIK5	7725,-1931
chr17:48624780-48625304	chr17	+	48624950	48625218	True	NM_022827,NM_001267	chr17,chr17	+,-	SPATA20,CHAD	-439,-78723
chr21:46336705-46337789	chr21	+	46336839	46337805	True	NM_058190,NM_000211	chr21,chr21	+,-	C21orf70,ITGB2	22149,3210
chr22:28317912-28318851	chr22	+	28318127	28318517	True	NR_036169,NR_026963,NR_026962,NM_012399,NR_036170	chr22,chr22,chr22,chr22,chr22	-,+,+,-,+	MIR3199-1,TTC28-AS1,TTC28-AS1,PITPNB,MIR3199-2	-1527,-2814,-2814,-2872,-1664
chr5:175231727-175232593	chr5	+	175231730	175232332	True	NM_032361,NM_006650	chr5,chr5	-,+	THOC3,CPLX2	163263,-8171
chr3:47323600-47323926	chr3	+	47323667	47323861	True	NM_022342,NM_025010,NM_001134878,NM_182902	chr3,chr3,chr3,chr3	-,+,-,-	KIF9,KLHL18,KIF9,KIF9	526,468,526,526
chr1:143743799-143744090	chr1	+	143743800	143744089	True	NR_033189,NR_027469,NR_027468	chr1,chr1,chr1	+,-,-	LOC100130000,LOC100286793,FLJ39739	-56721,548,418
chr1:143743799-143744090	chr1	+	147931323	147931373	False	NM_001097616,NR_027468	chr1,chr1	+,-	GPR89C,FLJ39739	-505807,657
chr1:143743799-143744090	chr1	+	144340125	144340175	False	NR_024584,NM_001037675,NR_024510,NR_024511	chr1,chr1,chr1,chr1	-,+,-,-	LOC728875,NBPF9,LOC728855,LOC728855	1630,274783,648,648
chr1:143743799-143744090	chr1	+	144520373	144520423	False	NR_024584,NM_001037675	chr1,chr1	-,+	LOC728875,NBPF9	1596,94535
chr17:61093685-61095632	chr17	+	61094434	61095584	True	NM_152598,NM_025185	chr17,chr17	-,+	MARCH10,TANC2	-208729,-7594
chr11:8953927-8954254	chr11	+	8953973	8954243	True	NM_020643,NM_182901	chr11,chr11	-,+	C11orf16,C11orf17	362,-21222
chr3:48286763-48288093	chr3	+	48286923	48287894	True	NM_005793,NM_016089	chr3,chr3	-,+	NME6,ZNF589	55015,-4378
chr1:10852395-10853417	chr1	+	10852445	10853416	True	NM_001079843,NM_007375,NM_017766	chr1,chr1,chr1	-,+,-	CASZ1,TARDBP,CASZ1	3342,219262,3342
chr2:128615379-128615708	chr2	+	128615382	128615744	True	NM_032740,NM_004805	chr2,chr2	+,-	SFT2D3,POLR2D	-156836,35
chr1:202092454-202093808	chr1	+	202092518	202093574	True	NM_004767,NM_138795	chr1,chr1	+,-	GPR37L1,ARL8A	-540,20342
chr12:112547041-112547602	chr12	+	112547343	112547613	True	NM_001143906,NM_024953	chr12,chr12	+,-	TRAFD1,NAA25	15735,-708
chr13:45771566-45771992	chr13	+	45771678	45772037	True	NM_004128,NM_198404	chr13,chr13	+,-	GTF2F2,KCTD4	-77101,3195
chr17:47755148-47755360	chr17	+	47755335	47755395	True	NM_001007226,NM_001007227,NM_001007230,NM_003563,NM_001007228,NM_001007229,NM_007225	chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,-,+	SPOP,SPOP,SPOP,SPOP,SPOP,SPOP,NXPH3	180,180,180,180,180,180,-102088
chr7:100487828-100488154	chr7	+	100487838	100488140	True	NM_000665,NM_015908,NM_015831,NM_001015072	chr7,chr7,chr7,chr7	-,+,-,-	ACHE,SRRT,ACHE,UFSP1	5451,-15188,5451,-499
chr18:42262895-42264836	chr18	+	42263071	42264542	True	NM_015559,NM_001130110,NR_036203	chr18,chr18,chr18	+,+,-	SETBP1,SETBP1,MIR4319	-2266,-2991,285644
chr9:95943776-95945056	chr9	+	95944002	95944782	True	NM_004148,NM_006648	chr9,chr9	-,+	NINJ1,WNK2	-47432,2429
chr19:42303523-42303734	chr19	+	42303568	42303774	True	NM_173506,NM_001815	chr19,chr19	-,+	LYPD4,CEACAM3	44784,-3085
chr6:167651103-167651346	chr6	+	167651261	167651375	True	NM_005299,NM_001143947	chr6,chr6	-,+	GPR31,UNC93A	-79942,53427
chr14:58864738-58865847	chr14	+	58864770	58865605	True	NM_012460,NM_207377	chr14,chr14	-,+	TIMM9,TOMM20L	28690,-2177
chr15:72560336-72560961	chr15	+	72560492	72560821	True	NM_020214,NR_027262	chr15,chr15	-,+	PARP6,C15orf34	2864,107632
chr7:5013111-5013522	chr7	+	5013278	5013550	True	NM_198403,NR_023384,NR_023385,NR_015449	chr7,chr7,chr7,chr7	-,+,+,+	MMD2,RNF216L,RNF216L,RNF216L	-14434,65,65,65
chr7:100965945-100966369	chr7	+	100965944	100966242	True	NM_001130821,NM_001130820,NM_022777,NM_001130822,NM_133457	chr7,chr7,chr7,chr7,chr7	-,-,-,-,+	RABL5,RABL5,RABL5,RABL5,EMID2	-851,-851,-851,-851,39879
chr12:117176788-117177730	chr12	+	117176890	117177620	True	NM_001109903,NM_032814,NM_024738	chr12,chr12,chr12	+,+,-	RNFT2,RNFT2,C12orf49	-847,-847,-1047
chr15:41575459-41575759	chr15	+	41575458	41575521	True	NM_007280,NR_026757	chr15,chr15	-,+	OIP5,LOC729082	49351,679
chr7:140801426-140803061	chr7	+	140801588	140802916	True	NM_053035,NM_001195278	chr7,chr7	-,+	MRPS33,LOC100131199	-86807,-27607
chr4:16868233-16869100	chr4	+	16868348	16869121	True	NM_001130834,NR_027697	chr4,chr4	-,+	LDB2,FLJ39653	31359,-640121
chr15:34635086-34635372	chr15	+	34635163	34635363	True	NM_133647,NM_018648,NM_001042497,NM_175741,NM_001042495,NM_001042496,NM_001042494	chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,-,+,-,-,-	SLC12A6,NOP10,SLC12A6,C15orf55,SLC12A6,SLC12A6,SLC12A6	-6118,49,-6118,2702,-4898,-5202,-5202
chr1:150039837-150040158	chr1	+	150039881	150040187	True	NM_007259,NM_020205	chr1,chr1	+,-	VPS45,OTUD7B	-590,-57195
chr10:51464529-51465415	chr10	+	51464823	51465255	True	NM_001077685,NM_002443	chr10,chr10	-,+	AGAP7,MSMB	21122,84297
chr3:15141604-15142743	chr3	+	15141611	15142550	True	NM_022340,NM_014296	chr3,chr3	-,+	ZFYVE20,CAPN7	-956,105182
chr18:26230133-26231481	chr18	+	26230137	26231421	True	NR_031684,NM_001792	chr18,chr18	+,-	MIR302F,CDH2	1647454,-472692
chr22:23332330-23333248	chr22	+	23332594	23333140	True	NM_002073,NM_014433	chr22,chr22	+,-	GNAZ,RTDR1	79528,151159
chr2:207021834-207022778	chr2	+	207021962	207022618	True	NM_001959,NM_005006,NM_001037663,NM_021121,NR_002589,NR_002590,NM_001199984,NM_001199983,NM_001199982,NM_001199981	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,-,+,+,+,+,-,-,-,-	EEF1B2,NDUFS1,EEF1B2,EEF1B2,SNORD51,SNORA41,NDUFS1,NDUFS1,NDUFS1,NDUFS1	1699,1682,1699,1699,3986,4333,1357,1682,1682,1682
chr4:123844007-123844220	chr4	+	123844013	123844269	True	NM_198041,NM_007083,NM_145207	chr4,chr4,chr4	-,-,+	NUDT6,NUDT6,SPATA5	36,-254,-45
chr2:87091456-87093378	chr2	+	87091537	87093258	True	NR_037931,NM_172101,NM_172102,NM_001178100,NM_172213,NM_004931	chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-	LOC100286979,CD8B,CD8B,CD8B,CD8B,CD8B	-2640,-2490,-2490,-2490,-2490,-2490
chr2:87091456-87093378	chr2	-	107099296	107100688	False	NM_001144013,NR_003506	chr2,chr2	-,+	RGPD3,PLGLA	-14495,-96585
chr17:34079587-34079803	chr17	+	34079633	34079829	True	NM_145272,NM_139285	chr17,chr17	+,-	C17orf50,GAS2L2	8086,118
chr20:44518546-44518792	chr20	+	44518661	44518827	True	NM_080749,NM_080608,NM_001167594,NM_080603,NM_000308,NM_001127695	chr20,chr20,chr20,chr20,chr20,chr20	-,-,+,+,+,+	NEURL2,C20orf165,CTSA,ZSWIM1,CTSA,CTSA	1124,-2423,763,-8865,763,763
chr5:9544936-9545205	chr5	+	9544941	9545205	True	NM_003966,NR_003689	chr5,chr5	-,+	SEMA5A,SNORD123	1078,3733
chr19:18451765-18452053	chr19	+	18451933	18452009	True	NM_017712,NM_012321	chr19,chr19	+,-	PGPEP1,LSM4	-576,-17932
chr2:91755747-91756208	chr2	+	91755999	91756211	True	NR_003503,NR_027238	chr2,chr2	+,-	GGT8P,LOC654342	207156,91814
chr14:21906873-21908456	chr14	+	21907297	21908226	True	NM_020920,NM_014828,NM_001170629	chr14,chr14,chr14	-,+,-	CHD8,TOX4,CHD8	-1840,37108,-7430
chr9:139636901-139637163	chr9	+	139636932	139637178	True	NM_198946,NR_033913,NM_001001712	chr9,chr9,chr9	-,+,-	LCN6,LOC100128593,LCN10	5852,3434,283
chr3:169530432-169530639	chr3	+	169530448	169530676	True	NM_001080460,NM_001172779,NM_153353,NM_001172780	chr3,chr3,chr3,chr3	+,-,-,-	LRRIQ4,LRRC34,LRRC34,LRRC34	9033,-18,-18,-18
chr11:19212906-19213174	chr11	+	19213052	19213194	True	NM_001127656,NM_019028	chr11,chr11	-,+	CSRP3,ZDHHC13	10386,-74411
chr18:3380951-3381450	chr18	+	3380950	3381321	True	NM_019856,NM_174886	chr18,chr18	-,+	MYOM1,TGIF1	-160844,30750
chr13:33848808-33849040	chr13	+	33848863	33849077	True	NM_004795,NM_178006	chr13,chr13	+,-	KL,STARD13	-258356,10874
chr16:67903824-67904056	chr16	+	67903971	67904105	True	NM_014329,NM_025082	chr16,chr16	+,-	EDC4,CENPT	2893,-22610
chr3:20049613-20049981	chr3	+	20049662	20049772	True	NM_003884,NR_027694	chr3,chr3	+,-	KAT2B,C3orf48	31751,4043
chr9:125688708-125690272	chr9	+	125688804	125690077	True	NM_012197,NM_020924	chr9,chr9	+,-	RABGAP1,ZBTB26	13210,3753
chr17:37616767-37617106	chr17	+	37616917	37616993	True	NM_004774,NM_016507,NM_015083	chr17,chr17,chr17	-,+,+	MED1,CDK12,CDK12	-9390,745,745
chr7:148956914-148957222	chr7	+	148957191	148957279	True	NM_001001661,NM_001195220	chr7,chr7	-,+	ZNF425,ZNF783	-133753,1982
chr11:47291262-47291605	chr11	+	47291418	47291574	True	NM_130472,NM_130473,NM_130470,NM_130471,NM_130476,NM_130474,NM_130475,NM_003682,NM_001131064,NM_001135943,NM_001135944	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,+,+,+,-,+,+	MADD,MADD,MADD,MADD,MADD,MADD,MADD,MADD,ACP2,MADD,MADD	-270,-270,-542,-270,96,-270,96,-270,-20961,96,-270
chr12:56473349-56473557	chr12	+	56473354	56473567	True	NM_001005915,NM_001130420,NM_001982	chr12,chr12,chr12	+,-,+	ERBB3,SMARCC2,ERBB3	324,109835,241
chr7:6011184-6012263	chr7	+	6011189	6012233	True	NM_006303,NM_173565,NM_001099697	chr7,chr7,chr7	+,-,-	AIMP2,RSPH10B,RSPH10B2	36648,-875,-875
chr7:6011184-6012263	chr7	-	6791820	6792864	False	NM_173565,NM_016265,NM_001099697	chr7,chr7,chr7	+,-,+	RSPH10B,ZNF12,RSPH10B2	875,-45254,875
chrX:47341990-47342268	chrX	+	47342013	47342225	True	NM_001654,NM_153380,NM_007130	chrX,chrX,chrX	+,-,-	ARAF,ZNF41,ZNF41	78290,170,170
chrX:120009472-120009801	chrX	+	120009640	120009794	True	NM_012084,NM_001145718	chrX,chrX	+,-	GLUD2,CT47B1	171667,35
chrX:120009472-120009801	chrX	+	120090315	120090469	False	NM_012084,NM_001080139,NM_001080138,NM_001080137,NM_173571,NM_001080146,NM_001080144,NM_001080145,NM_001080142,NM_001080143,NM_001080140,NM_001080141	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,-,-,-,-,-,-,-,-,-,-,-	GLUD2,CT47A8,CT47A9,CT47A10,CT47A11,CT47A1,CT47A3,CT47A2,CT47A5,CT47A4,CT47A7,CT47A6	90992,-4721,-4721,-4721,-4721,-4721,-4721,-4721,-4721,-4721,35,-4721
chr12:105623647-105624557	chr12	+	105623974	105624585	True	NM_018171,NM_001145199	chr12,chr12	-,+	APPL2,C12orf75	5473,99828
chr19:2153824-2154935	chr19	+	2154571	2154903	True	NM_001077523,NM_003938,NM_032482	chr19,chr19,chr19	-,-,+	AP3D1,AP3D1,DOT1L	-3015,-3015,9244
chr18:72202354-72202691	chr18	+	72202370	72202738	True	NR_024484,NM_032649	chr18,chr18	-,+	LOC400657,CNDP1	62383,-729
chr12:25075336-25075659	chr12	+	25075429	25075533	True	NM_001204126,NM_001178093	chr12,chr12	+,-	LRMP,BCAT1	129647,-19420
chr5:137667156-137667828	chr5	+	137667245	137667803	True	NM_001135647,NM_001790,NM_022809,NM_016605	chr5,chr5,chr5,chr5	+,-,-,+	FAM53C,CDC25C,CDC25C,FAM53C	5420,25,25,5900
chr16:55855411-55856338	chr16	+	55855510	55856220	True	NR_003276,NM_001025194	chr16,chr16	+,-	CES1P1,CES1	-61050,10917
chr17:18322549-18323710	chr17	+	18322730	18323702	True	NM_148918,NR_001443	chr17,chr17	-,+	SHMT1,LOC339240	-55874,1792
chr17:18322549-18323710	chr17	-	16755669	16756374	False	NR_026810,NR_029392	chr17,chr17	+,-	FAM106C,KRT16P2	-63663,-19522
chr17:18322549-18323710	chr17	-	20427340	20428313	False	NM_001190790,NR_029393	chr17,chr17	+,-	CDRT15L2,KRT16P3	54723,-19529
chr1:112013692-112015558	chr1	+	112013713	112015407	True	NM_024102,NM_174896	chr1,chr1	-,+	WDR77,C1orf162	-21883,1196
chr14:95614337-95614694	chr14	+	95614402	95614722	True	NR_015415,NM_177438,NM_030621	chr14,chr14,chr14	+,-,-	FLJ45244,DICER1,DICER1	9302,9087,-6347
chr19:54104922-54105879	chr19	+	54105033	54105497	True	NM_001012728,NR_002938	chr19,chr19	+,-	DPRX,LOC284379	29812,1304
chr3:11034710-11035164	chr3	+	11034907	11035165	True	NM_003042,NR_027102	chr3,chr3	+,-	SLC6A1,LOC285370	-538,-229030
chr17:39643254-39644898	chr17	+	39643623	39644937	True	NM_005801,NM_003771,NM_002280	chr17,chr17,chr17	+,-,-	EIF1,KRT36,KRT35	200189,1229,-6231
chr11:14700625-14701023	chr11	+	14700624	14701074	True	NM_000922,NM_148976	chr11,chr11	+,-	PDE3B,PSMA1	-35409,-35444
chr12:120804819-120805447	chr12	+	120804914	120805470	True	NM_012240,NM_002442	chr12,chr12	+,-	SIRT4,MSI1	-64841,1538
chr9:33816826-33817111	chr9	+	33816825	33817115	True	NR_003685,NM_017811	chr9,chr9	-,+	SNORD121A,UBE2R2	135787,66
chr1:109508296-109509843	chr1	+	109508393	109509501	True	NM_013296,NM_015127,NM_001048210	chr1,chr1,chr1	+,-,-	GPSM2,CLCC1,CLCC1	-88841,-2282,-2282
chr10:98593186-98593471	chr10	+	98593282	98593508	True	NM_032440,NM_001170766,NM_152309,NM_001170765	chr10,chr10,chr10,chr10	+,+,-,+	LCOR,LCOR,PIK3AP1,LCOR	-621,-1316,-113003,-1316
chr19:52676260-52676850	chr19	+	52676455	52676565	True	NM_001102657,NM_014225	chr19,chr19	-,+	ZNF836,PPP2R1A	-1559,16489
chr2:113516758-113518753	chr2	+	113516823	113518701	True	NM_152515,NM_005415	chr2,chr2	-,+	CKAP2L,SLC20A1	3603,-113440
chr20:62586047-62586454	chr20	+	62586057	62586283	True	NM_017859,NM_001193379,NR_027287	chr20,chr20,chr20	-,-,+	UCKL1,UCKL1,UCKL1-AS1	1567,-3530,-1371
chr6:155764418-155766359	chr6	+	155764524	155766350	True	NM_015718,NM_001001346	chr6,chr6	-,+	NOX3,CLDN20	10737,-179428
chr2:73440220-73440518	chr2	+	73440422	73440494	True	NM_006062,NM_032319	chr2,chr2	+,-	SMYD5,C2orf7	871,19912
chr5:176512840-176513658	chr5	+	176512872	176513558	True	NM_213647,NM_022963,NM_001199298,NM_002011	chr5,chr5,chr5,chr5	+,+,-,+	FGFR4,FGFR4,UIMC1,FGFR4	362,2992,-79077,362
chr3:101420197-101422186	chr3	+	101420593	101422175	True	NR_002941,NM_000986	chr3,chr3	+,-	LOC285359,RPL24	9102,-15030
chr4:39036796-39037810	chr4	+	39037010	39037747	True	NM_024943,NM_001171654,NM_001007075	chr4,chr4,chr4	-,+,+	TMEM156,KLHL5,KLHL5	-2969,8703,8703
chr10:46990436-46991729	chr10	+	46990542	46991368	True	NM_014696,NM_031912	chr10,chr10	+,-	GPRIN2,SYT15	2177,-19941
chr16:67695889-67696179	chr16	+	67695917	67696217	True	NM_016948,NM_001082487,NM_001082486,NM_022914,NM_001012984,NM_032140,NM_001037281	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,-,+,-,+	PARD6A,ACD,ACD,ACD,C16orf86,C16orf48,PARD6A	-1117,-1199,-1199,-1199,4499,4461,-1117
chr16:10913022-10913265	chr16	+	10913034	10913108	True	NM_000246,NM_001079512	chr16,chr16	+,-	CIITA,FAM18A	57946,-413
chr2:3705199-3705534	chr2	+	3705252	3705542	True	NM_002936,NM_018436	chr2,chr2	-,+	RNASEH1,ALLC	-99312,243
chr1:35491780-35492712	chr1	+	35492138	35492727	True	NM_024772,NM_007167	chr1,chr1	+,-	ZMYM1,ZMYM6	52244,4893
chr19:44455353-44455729	chr19	+	44455379	44455663	True	NM_003425,NM_013359	chr19,chr19	-,+	ZNF45,ZNF221	-15968,-33
chr11:12983853-12984253	chr11	+	12983989	12984287	True	NM_001080521,NM_032320	chr11,chr11	+,-	RASSF10,BTBD10	46682,500601
chr13:22176628-22177198	chr13	+	22176714	22177110	True	NM_152726,NM_002010	chr13,chr13	-,+	EFHA1,FGF9	1302,68104
chr11:8704524-8704768	chr11	+	8704524	8704780	True	NM_000990,NR_002977,NM_014818,NR_002580	chr11,chr11,chr11,chr11	+,+,-,+	RPL27A,SNORA45,TRIM66,SNORA3	-580,2205,-24141,993
chr11:1686571-1686804	chr11	+	1686622	1686834	True	NR_026642,NR_026643	chr11,chr11	-,+	FAM99B,FAM99A	20075,-6
chr17:62208944-62209828	chr17	+	62208958	62209495	True	NR_004380,NM_001433	chr17,chr17	+,-	SNORD104,ERN1	13942,-1456
chr1:151886317-151888235	chr1	+	151886589	151888209	True	NR_024237,NM_053055	chr1,chr1	+,-	LOC100132111,THEM4	-75695,-4228
chr21:40815679-40816343	chr21	+	40816018	40816357	True	NM_001001713,NM_007341,NM_152505	chr21,chr21,chr21	+,+,-	SH3BGR,SH3BGR,LCA5L	1439,7422,-12
chr12:123200235-123200618	chr12	+	123200289	123200655	True	NM_006018,NM_003677	chr12,chr12	-,+	GPR109B,DENR	834,36715
chr12:123200235-123200618	chr12	+	123186967	123187201	False	NM_003677,NM_177551	chr12,chr12	+,-	DENR,GPR109A	50169,753
chr19:54566446-54567099	chr19	+	54566641	54567055	True	NM_198481,NM_004542	chr19,chr19	-,+	VSTM1,NDUFA3	202,39104
chr18:5541006-5542591	chr18	+	5541529	5542590	True	NM_012307,NR_015389	chr18,chr18	-,+	EPB41L3,LOC339290	1447,-303481
chr13:111616553-111618203	chr13	+	111616593	111617929	True	NM_017664,NM_001113511	chr13,chr13	-,+	ANKRD10,ARHGEF7	-49177,149694
chr19:58101759-58102047	chr19	+	58101835	58102087	True	NM_020880,NM_001010879,NM_017879	chr19,chr19,chr19	+,+,-	ZNF530,ZIK1,ZNF416	9165,-6258,-11592
chr2:96262003-96262302	chr2	+	96262234	96262352	True	NM_001164464,NM_138800	chr2,chr2	-,+	TRIM43B,TRIM43	-111755,-4520
chr2:96262003-96262302	chr2	-	96145880	96145936	False	NM_001164464,NM_016044	chr2,chr2	-,+	TRIM43B,FAHD2A	4599,-77489
chr15:91446601-91447565	chr15	+	91446801	91447553	True	NM_006122,NM_198527	chr15,chr15	+,-	MAN2A2,HDDC3	8,28271
chr3:113671412-113673194	chr3	+	113671443	113672928	True	NM_173570,NM_020817	chr3,chr3	+,-	ZDHHC23,KIAA1407	-4754,102582
chr15:65068406-65068926	chr15	+	65068489	65068949	True	NM_194272,NM_001195059	chr15,chr15	-,+	RBPMS2,PLEKHO2	-719,65132
chr11:120221978-120222473	chr11	+	120222069	120222528	True	NM_012101,NM_015313	chr11,chr11	-,+	TRIM29,ARHGEF12	-213206,-14507
chr16:56676620-56677260	chr16	+	56676620	56677090	True	NR_003658,NR_036677,NM_005947,NM_005946,NM_005950,NR_027781	chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,-,+	MT1DP,MT1JP,MT1B,MT1A,MT1G,MT1DP	625,-7020,8720,-4093,24937,508
chr5:132386344-132387010	chr5	+	132386424	132387044	True	NM_017665,NM_002154	chr5,chr5	-,+	ZCCHC10,HSPA4	-24184,617
chr1:78478780-78479882	chr1	+	78478779	78479588	True	NM_007034,NM_003902	chr1,chr1	+,-	DNAJB4,FUBP1	-8194,-34002
chr4:4229932-4231378	chr4	+	4229934	4231186	True	NM_145291,NM_177998	chr4,chr4	+,-	ZBTB49,OTOP1	60737,-1313
chr20:23667123-23667700	chr20	+	23667145	23667677	True	NM_001899,NR_001279	chr20,chr20	-,+	CST4,CSTT	2035,-167413
chr4:70597496-70597800	chr4	+	70597558	70597846	True	NM_014465,NM_001025104	chr4,chr4	-,+	SULT1B1,CSN1S1	28640,198952
chr22:41811375-41812171	chr22	+	41811385	41812008	True	NM_016272,NM_003216	chr22,chr22	-,+	TOB2,TEF	31070,-33473
chr19:36549742-36550950	chr19	+	36549769	36550739	True	NM_001083961,NM_152658,NM_173636	chr19,chr19,chr19	+,-,+	WDR62,THAP8,WDR62	-4037,-4105,-4037
chr11:47666881-47668130	chr11	+	47666964	47667989	True	NM_014342,NM_001164379	chr11,chr11	-,+	MTCH2,FAM180B	-2758,-58786
chr10:75172342-75172804	chr10	+	75172648	75172852	True	NM_173348,NM_001156,NM_004034	chr10,chr10,chr10	+,-,-	FAM149B1,ANXA7,ANXA7	-244822,1039,1039
chr8:121136562-121137118	chr8	+	121136647	121136955	True	NM_024094,NM_021110	chr8,chr8	-,+	DSCC1,COL14A1	-268477,396
chr17:56596235-56596671	chr17	+	56596253	56596657	True	NR_037156,NM_002876,NM_004687	chr17,chr17,chr17	-,+,-	SEPT4,RAD51C,MTMR4	8767,173305,-1002
chr4:144477008-144478227	chr4	+	144477357	144478262	True	NM_001168235,NR_003675	chr4,chr4	-,+	FREM3,LOC441046	143616,2362
chr11:66136662-66136974	chr11	+	66136823	66136961	True	NM_001532,NM_178864	chr11,chr11	-,+	SLC29A2,NPAS4	2380,51513
chr5:78999635-79000899	chr5	+	78999938	79000772	True	NM_004272,NM_153610	chr5,chr5	-,+	HOMER1,CMYA5	-190238,-14341
chr5:132948598-132949140	chr5	+	132948704	132949138	True	NM_003202,NM_015082	chr5,chr5	+,-	TCF7,FSTL4	501263,-481
chr5:93996728-93997261	chr5	+	93996814	93997206	True	NM_173665,NM_032290	chr5,chr5	-,+	KIAA0825,ANKRD32	-42505,-42474
chrX:52545212-52545883	chrX	+	52545213	52545816	True	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,-,-,-,-,-,-,-,-,-,-	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	278,222,222,431,222,222,222,278,431,278,431,431,431,278,278
chrX:52545212-52545883	chrX	-	52512141	52512744	False	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,+,+,+,+,+,+,+,+,+,+	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	-278,-222,-222,-431,-222,-222,-222,-278,-431,-278,-431,-431,-431,-278,-278
chrX:52545212-52545883	chrX	+	52532319	52532922	False	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,-,-,-,-,-,-,-,-,-,-	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	278,222,222,431,222,222,222,278,431,278,431,431,431,278,278
chrX:52545212-52545883	chrX	-	52239190	52239793	False	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,+,+,+,+,+,+,+,+,+,+	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	-278,-222,-222,-431,-222,-222,-222,-278,-431,-278,-431,-431,-431,-278,-278
chrX:52545212-52545883	chrX	+	52259379	52259982	False	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,-,-,-,-,-,-,-,-,-,-	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	278,222,222,431,222,222,222,278,431,278,431,431,431,278,278
chr10:134151151-134152146	chr10	+	134151156	134152124	True	NR_026559,NM_030626,NM_173575,NM_001143757,NM_001143759,NM_001143758	chr10,chr10,chr10,chr10,chr10,chr10	+,+,-,+,+,+	LRRC27,LRRC27,STK32C,LRRC27,LRRC27,LRRC27	-603,-5600,-29679,-5473,-5600,-5600
chr5:150020613-150021102	chr5	+	150020624	150021088	True	NM_018047,NM_007286,NM_001109974	chr5,chr5,chr5	-,+,+	RBM22,SYNPO,SYNPO	59631,-468,-468
chr12:120428155-120429220	chr12	+	120428326	120429148	True	NM_207311,NM_007174	chr12,chr12	+,-	CCDC64,CIT	-730,-113234
chr19:11850517-11850750	chr19	+	11850521	11850758	True	NM_152355,NM_001080493	chr19,chr19	+,-	ZNF441,ZNF823	27056,-761
chr7:116138889-116139389	chr7	+	116139114	116139232	True	NM_001233,NM_198212,NR_002330	chr7,chr7,chr7	+,+,-	CAV2,CAV2,ST7OT1	211,211,455206
chr19:475076-475864	chr19	+	475201	475746	True	NM_182577,NM_130760	chr19,chr19	-,+	ODF3L2,MADCAM1	-218,20743
chr12:22488626-22488959	chr12	+	22488631	22488961	True	NM_001039481,NM_003034	chr12,chr12	+,-	ETNK1,ST8SIA1	289114,-983
chr1:11331447-11332231	chr1	+	11331640	11332007	True	NM_004958,NM_013319	chr1,chr1	-,+	MTOR,UBIAD1	-9032,1247
chr19:48307537-48307890	chr19	+	48307583	48307868	True	NM_198479,NM_000554	chr19,chr19	-,+	TPRX1,CRX	-722,17230
chr19:48307537-48307890	chr19	-	48362431	48362510	False	NM_003167,NM_000554	chr19,chr19	-,+	SULT2A1,CRX	27194,-37384
chr16:30405870-30406174	chr16	+	30405909	30406073	True	NM_152652,NM_052838	chr16,chr16	+,-	ZNF48,SEPT1	983,-11738
chr8:10510247-10510509	chr8	+	10510317	10510539	True	NM_001040032,NM_178857	chr8,chr8	+,-	C8orf74,RP1L1	19607,2128
chrX:31501460-31502881	chrX	+	31501574	31502906	True	NM_203391,NM_004014	chrX,chrX	+,-	GK,DMD	-830149,23559
chr6:74065821-74066198	chr6	+	74066012	74066238	True	NM_001017361,NM_001025290	chr6,chr6	+,-	C6orf221,DPPA5	6161,-2013
chr1:40204194-40204438	chr1	+	40204268	40204356	True	NM_203456,NR_036544,NM_001195007,NR_036543,NM_022120,NM_006112	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,-,+	PPIE,PPIE,PPIE,PPIE,OXCT2,PPIE	160,160,160,160,32714,160
chr22:19706760-19707392	chr22	+	19707016	19707414	True	NM_024627,NM_001009939,NM_002688,NR_037611,NR_037612,NM_000407	chr22,chr22,chr22,chr22,chr22,chr22	-,+,+,+,+,+	C22orf29,SEPT5,SEPT5,SEPT5-GP1BB,SEPT5-GP1BB,GP1BB	135007,-1109,-5080,-2324,-1075,3651
chr1:185095517-185096608	chr1	+	185095800	185096531	True	NM_030934,NM_001105518	chr1,chr1	-,+	TRMT1L,SWT1	29640,29660
chr6:15025636-15025876	chr6	+	15025731	15025932	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	220594,637414
chr17:80331847-80332263	chr17	+	80331846	80332110	True	NM_003004,NM_018949	chr17,chr17	-,+	SECTM1,UTS2R	-39925,90
chr1:110051588-110051953	chr1	+	110051608	110051978	True	NM_182580,NM_020703	chr1,chr1	+,-	CYB561D1,AMIGO1	-14958,408
chr17:33879120-33880952	chr17	+	33879724	33880419	True	NR_003037,NM_001129820	chr17,chr17	+,-	SNORD7,SLFN14	20256,4748
chr8:7693232-7694950	chr8	+	7693444	7694870	True	NM_080389,NM_001040702,NM_152250	chr8,chr8,chr8	+,+,-	DEFB104A,DEFB104B,DEFB105A	82,82,-12084
chr8:7693232-7694950	chr8	-	7331727	7331963	False	NM_080389,NM_001040702,NM_001040703	chr8,chr8,chr8	-,-,+	DEFB104A,DEFB104B,DEFB105B	698,698,13279
chr2:133018674-133019697	chr2	+	133018767	133019397	True	NR_031608,NM_001508,NR_027020	chr2,chr2,chr2	-,+,-	MIR663B,GPR39,ANKRD30BL	-4114,154749,-3225
chr2:26206022-26206224	chr2	+	26206070	26206252	True	NM_002254,NM_016131	chr2,chr2	-,+	KIF3C,RAB10	-627,50476
chr19:12480431-12481709	chr19	+	12480769	12481463	True	NM_003437,NM_030824	chr19,chr19	+,-	ZNF136,ZNF442	-206954,-4294
chrX:133594506-133595144	chrX	+	133594618	133595104	True	NM_000194,NR_030587	chrX,chrX	+,-	HPRT1,MIR450B	-494,79245
chr18:55289785-55290060	chr18	+	55289790	55290028	True	NM_004852,NM_004539	chr18,chr18	+,-	ONECUT2,NARS	-186924,-613
chr2:210875194-210876548	chr2	+	210875337	210876206	True	NM_152519,NM_006916,NM_199229	chr2,chr2,chr2	-,+,+	C2orf67,RPE,RPE	159896,-8050,-8021
chr6:6007078-6007410	chr6	+	6007311	6007415	True	NM_016588,NM_004271	chr6,chr6	-,+	NRN1,LY86	268,581518
chr16:2835918-2836421	chr16	+	2836133	2836415	True	NM_152891,NM_001135086,NM_007108,NM_207013	chr16,chr16,chr16,chr16	-,+,-,-	PRSS33,PRSS41,TCEB2,TCEB2	343,12070,-8836,-8836
chr16:48662484-48663318	chr16	+	48662490	48663357	True	NM_153029,NM_031490	chr16,chr16	-,+	N4BP1,LONP2	-18370,-384330
chr15:59907357-59908158	chr15	+	59907412	59908156	True	NM_004751,NM_004492	chr15,chr15	+,-	GCNT3,GTF2A2	-3481,41631
chr19:16040285-16041120	chr19	+	16040453	16041067	True	NM_001004465,NM_021187,NM_001128932	chr19,chr19,chr19	+,-,-	OR10H4,CYP4F11,CYP4F11	18750,4659,4659
chr16:89753681-89754441	chr16	+	89753824	89754450	True	NM_001098533,NM_001160367,NM_052987,NR_027702,NR_027703,NM_152339,NM_052988	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,-,+	CDK10,CDK10,CDK10,CDK10,CDK10,SPATA2L,CDK10	-799,-799,-799,-799,-799,13721,-799
chr1:48237716-48238744	chr1	+	48237875	48238743	True	NM_001194986,NM_004474	chr1,chr1	-,+	LOC388630,FOXD2	223869,-336242
chr8:144693291-144693837	chr8	+	144693399	144693875	True	NM_023078,NM_032862,NM_003313	chr8,chr8,chr8	-,+,-	PYCRL,TIGD5,TSTA3	-1615,-13376,5907
chr15:29214374-29216083	chr15	+	29214419	29215897	True	NM_001130414,NM_138704,NM_005503	chr15,chr15,chr15	+,-,+	APBA2,NDNL2,APBA2	-630,346170,-630
chr2:219281602-219282678	chr2	+	219281929	219282667	True	NM_007127,NM_022152	chr2,chr2	+,-	VIL1,TMBIM1	1170,-124649
chr11:65667812-65668028	chr11	+	65667849	65668073	True	NM_005438,NM_006848	chr11,chr11	-,+	FOSL1,CCDC85B	24,-10025
chr2:149227337-149227672	chr2	+	149227348	149227671	True	NM_181742,NM_015630	chr2,chr2	-,+	ORC4,EPC2	-448175,174888
chr19:38747859-38748270	chr19	+	38747859	38748042	True	NM_021102,NM_001166103,NM_033256	chr19,chr19,chr19	+,+,-	SPINT2,SPINT2,PPP1R14A	7055,7055,-687
chr16:11365131-11365475	chr16	+	11365266	11365434	True	NM_021247,NM_005425,NM_152308,NM_002761,NM_002762	chr16,chr16,chr16,chr16,chr16	-,-,+,-,-	PRM3,TNP2,C16orf75,PRM1,PRM2	2068,-2106,73876,9808,4953
chr17:8091834-8092362	chr17	+	8092028	8092272	True	NM_017622,NR_037447	chr17,chr17	-,+	C17orf59,MIR3676	1342,-1586
chr15:44955359-44955626	chr15	+	44955358	44955524	True	NM_004048,NM_001160227,NM_025137	chr15,chr15,chr15	+,-,-	B2M,SPG11,SPG11	48160,402,402
chr19:5690474-5691171	chr19	+	5690506	5691220	True	NM_205767,NM_198708,NM_033643,NM_198533,NM_015414,NM_198706,NM_198707,NM_198704,NM_198705	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,+,+,+,+,+,+,+,+	C19orf70,HSD11B1L,RPL36,HSD11B1L,RPL36,HSD11B1L,HSD11B1L,HSD11B1L,HSD11B1L	-9595,-9482,-285,-9510,-211,-9482,-9505,-9522,-9522
chr1:171247901-171248479	chr1	+	171247933	171248520	True	NM_002021,NR_031627	chr1,chr1	+,-	FMO1,MIR1295	-30321,-176986
chr13:67803761-67804322	chr13	+	67803818	67804360	True	NR_002717,NM_020403,NM_203487	chr13,chr13,chr13	+,-,-	ATXN8OS,PCDH9,PCDH9	2876984,158,158
chr14:36263954-36264870	chr14	+	36264179	36264794	True	NM_014990,NM_032352	chr14,chr14	-,+	RALGAPA1,BRMS1L	13693,30802
chr16:34710424-34712413	chr16	+	34710436	34712377	True	NR_026980,NR_027079	chr16,chr16	-,+	LOC146481,LOC283914	2641,-112591
chr9:138392006-138392287	chr9	+	138392018	138392230	True	NM_144654,NM_001048265,NM_016034	chr9,chr9,chr9	-,-,+	C9orf116,C9orf116,MRPS2	-257,-257,252
chr19:41618778-41619185	chr19	+	41619023	41619093	True	NM_030589,NM_000774	chr19,chr19	-,+	CYP2A7,CYP2F1	-230366,1259
chr16:4293895-4294707	chr16	+	4293895	4294733	True	NM_001098814,NM_032575	chr16,chr16	-,+	SRL,GLIS2	-1814,87491
chr22:41870896-41871618	chr22	+	41871033	41871624	True	NM_032758,NM_001098	chr22,chr22	-,+	PHF5A,ACO2	-6325,-5955
chr5:22798456-22799193	chr5	+	22798623	22798752	True	NR_003921,NM_004061	chr5,chr5	+,-	PMCHL1,CDH12	-656224,55038
chr1:153699754-153700251	chr1	+	153699978	153700174	True	NM_023015,NM_004515	chr1,chr1	+,-	INTS3,ILF2	392,-56499
chr7:140804232-140804504	chr7	+	140804234	140804431	True	NM_053035,NM_001195278	chr7,chr7	-,+	MRPS33,LOC100131199	-89453,-30259
chr1:67016344-67017775	chr1	+	67016492	67017513	True	NM_005478,NM_032291	chr1,chr1	-,+	INSL5,SGIP1	249479,-16718
chr11:67395647-67396388	chr11	+	67395662	67396416	True	NM_007103,NM_181843	chr11,chr11	+,-	NDUFV1,NUDT8	-21390,1035
chr1:7832921-7833423	chr1	+	7832971	7833437	True	NM_006786,NM_004781	chr1,chr1	-,+	UTS2,VAMP3	79723,-1693
chr2:71355986-71356529	chr2	+	71356165	71356497	True	NM_005791,NM_032601	chr2,chr2	+,-	MPHOSPH10,MCEE	946,947
chr14:50322334-50323279	chr14	+	50322754	50323295	True	NM_004713,NM_001663	chr14,chr14	-,+	NEMF,ARF6	-3215,36440
chr12:53474524-53475496	chr12	+	53474536	53475349	True	NM_002178,NM_032840	chr12,chr12	+,-	IGFBP6,SPRYD3	16086,-1332
chr15:34631362-34632478	chr15	+	34631500	34632452	True	NM_133647,NM_001042496,NM_001042497,NM_001042494,NM_001042495,NM_018648,NM_175741	chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,-,-,-,-,+	SLC12A6,SLC12A6,SLC12A6,SLC12A6,SLC12A6,NOP10,C15orf55	-2455,-1539,-2455,-1539,-1235,2960,5613
chr3:54161014-54162367	chr3	+	54161017	54162285	True	NM_018398,NM_021237	chr3,chr3	+,-	CACNA2D3,SELK	-4377,-235028
chr1:185286732-185287129	chr1	+	185286776	185287118	True	NM_017673,NM_006469	chr1,chr1	+,-	SWT1,IVNS1ABP	-160536,-315
chr5:141059942-141060712	chr5	+	141059957	141060611	True	NM_022481,NM_173828	chr5,chr5	-,+	ARAP3,RELL2	1239,-43491
chr12:12510346-12511175	chr12	+	12510406	12511177	True	NM_058169,NM_018050,NR_024061	chr12,chr12,chr12	+,-,-	LOH12CR1,MANSC1,LOH12CR2	-437,-7237,-405
chr13:113635031-113635961	chr13	+	113635075	113635925	True	NM_024979,NR_034002	chr13,chr13	+,-	MCF2L,MCF2L-AS1	-1471,-12123
chr2:184014725-184015063	chr2	+	184014917	184015101	True	NM_138285,NM_205842	chr2,chr2	+,-	NUP35,NCKAP1	-25888,-111688
chr14:23565876-23566211	chr14	+	23566079	23566253	True	NM_001164815,NM_001164814,NM_017924,NM_014977	chr14,chr14,chr14,chr14	-,-,+,-	ACIN1,ACIN1,C14orf119,ACIN1	-1256,-1256,-1349,-1256
chr1:200994740-200995639	chr1	+	200994743	200995652	True	NM_001142569,NM_017596	chr1,chr1	+,-	C1orf106,KIF21B	-130795,-1915
chr7:129937487-129937839	chr7	+	129937545	129937827	True	NM_032842,NM_001163446,NM_016352	chr7,chr7,chr7	-,+,+	TMEM209,CPA4,CPA4	-92207,-4622,-4622
chr18:54323804-54324547	chr18	+	54323870	54324364	True	NM_052834,NM_015285,NR_024546	chr18,chr18,chr18	+,+,-	WDR7,WDR7,TXNL1	-5318,-5318,-17950
chr9:65600100-65600804	chr9	+	65600212	65600817	True	NR_024496,NM_015667	chr9,chr9	+,-	LOC442421,FAM75A7	893451,-90602
chr9:65600100-65600804	chr9	+	43859169	43859219	False	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	-228439,-174335
chr10:35486539-35487172	chr10	+	35486734	35487107	True	NM_182717,NM_001198777,NM_182718,NM_182719,NM_182725,NM_182724,NM_182723,NM_182722,NM_182721,NM_182720	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,-,+,+,+,+,+,+,+,+	CREM,CUL2,CREM,CREM,CREM,CREM,CREM,CREM,CREM,CREM	-2730,-107164,-2730,-2730,-1955,-1955,-1955,-1955,-1955,-2730
chr16:84539977-84540665	chr16	+	84540092	84540670	True	NM_014861,NM_020947	chr16,chr16	+,-	ATP2C2,KIAA1609	-138012,-1804
chr9:140515031-140516661	chr9	+	140515173	140516207	True	NM_024757,NM_001145527	chr9,chr9	+,+	EHMT1,EHMT1	-1780,-1780
chr7:42972573-42973474	chr7	+	42972635	42973446	True	NM_031903,NM_002787	chr7,chr7	+,-	MRPL32,PSMA2	-748,-830
chr10:74716356-74717725	chr10	+	74716742	74717569	True	NM_152635,NM_032562	chr10,chr10	+,-	OIT3,PLA2G12B	-63467,-2232
chr7:77036298-77037736	chr7	+	77036425	77037708	True	NM_002835,NM_017439	chr7,chr7	+,-	PTPN12,PION	129064,8068
chr2:174674622-174676235	chr2	+	174674878	174676049	True	NM_145810,NM_001017371	chr2,chr2	+,-	CDCA7,SP3	-455368,152949
chr22:39049673-39050073	chr22	+	39049810	39050064	True	NM_001002880,NM_001013647,NM_015373	chr22,chr22,chr22	+,-,+	CBY1,LOC646851,CBY1	2593,2628,2593
chr2:74373712-74373924	chr2	+	74373726	74373916	True	NM_212552,NM_006636,NM_001035505	chr2,chr2,chr2	-,+,-	BOLA3,MTHFD2,BOLA3	1173,51773,1173
chr21:17099194-17099634	chr21	+	17099368	17099646	True	NM_003489,NM_013396	chr21,chr21	-,+	NRIP1,USP25	-662242,2849
chr17:46048843-46049055	chr17	+	46048917	46049056	True	NM_024320,NM_176096	chr17,chr17	-,+	PRR15L,CDK5RAP3	-13807,-539
chr15:72522779-72523227	chr15	+	72522954	72523264	True	NM_182471,NM_182470,NM_002654,NM_145204	chr15,chr15,chr15,chr15	-,-,-,+	PKM2,PKM2,PKM2,SENP8	470,470,470,-112375
chr16:85587211-85587445	chr16	+	85587404	85587486	True	NM_001134473,NM_016095	chr16,chr16	+,-	KIAA0182,GINS2	57542,135152
chr17:50235922-50236203	chr17	+	50236023	50236135	True	NM_001082534,NM_020178,NM_001082533,NM_016001	chr17,chr17,chr17,chr17	-,-,-,+	CA10,CA10,CA10,UTP18	1292,47,1076,-898177
chr10:118357620-118359562	chr10	+	118357642	118359610	True	NM_006229,NM_144661	chr10,chr10	+,-	PNLIPRP1,C10orf82	-7203,69922
chr1:162824683-162825715	chr1	+	162824709	162825426	True	NM_178550,NM_016371	chr1,chr1	-,+	C1orf110,HSD17B7	13236,-64264
chr11:120533047-120533966	chr11	+	120533184	120534009	True	NM_012101,NM_014619	chr11,chr11	-,+	TRIM29,GRIK4	-524321,-2208
chr1:25291342-25291548	chr1	+	25291350	25291418	True	NM_013943,NM_001031680	chr1,chr1	+,-	CLIC4,RUNX3	-219649,133
chr19:43709800-43710973	chr19	+	43710020	43710466	True	NM_002780,NR_026881,NM_213633	chr19,chr19,chr19	-,+,-	PSG4,PRG1,PSG4	-230,142741,-230
chr10:81680617-81680861	chr10	+	81680660	81680746	True	NR_002724,NM_003019	chr10,chr10	+,-	MBL1P,SFTPD	-777,28165
chr10:82295521-82295870	chr10	+	82295581	82295906	True	NM_207372,NM_138812,NM_001145719	chr10,chr10,chr10	+,-,+	SH2D4B,DYDC1,SH2D4B	1751,-179081,4668
chr10:76816781-76817135	chr10	+	76817084	76817182	True	NM_001003892,NM_001174156	chr10,chr10	-,+	DUPD1,SAMD8	1140,54210
chr9:133886299-133886538	chr9	+	133886354	133886547	True	NM_001145106,NM_006059	chr9,chr9	-,+	FIBCD1,LAMC3	-71899,-1901
chr3:32829515-32830136	chr3	+	32829662	32830006	True	NM_016141,NM_001039111	chr3,chr3	-,+	DYNC1LI1,TRIM71	-217296,29503
chr10:30337368-30337790	chr10	+	30337405	30337843	True	NM_020848,NM_005204	chr10,chr10	-,+	KIAA1462,MAP3K8	10699,385022
chr9:32549027-32550651	chr9	+	32549416	32550498	True	NM_001195622,NM_005802,NR_033992,NR_033991	chr9,chr9,chr9,chr9	-,-,+,+	TOPORS,TOPORS,LOC100129250,LOC100129250	2178,2178,1272,643
chr8:125948882-125950002	chr8	+	125949048	125949822	True	NR_027321,NM_014846	chr8,chr8	+,-	LOC157381,KIAA0196	4427,154289
chr6:26385435-26385937	chr6	+	26385491	26385779	True	NM_006995,NM_003543,NM_181531,NM_001197237,NM_001197239,NM_001197238,NM_001197240	chr6,chr6,chr6,chr6,chr6,chr6,chr6	+,-,+,+,+,+,+	BTN2A2,HIST1H4H,BTN2A2,BTN2A2,BTN2A2,BTN2A2,BTN2A2	-2213,-99764,-2213,-2103,-2213,-2218,-2213
chr14:21957002-21958033	chr14	+	21957006	21957726	True	NM_014828,NR_028074	chr14,chr14	+,-	TOX4,RAB2B	-11730,-11874
chr8:118535899-118536100	chr8	+	118535901	118535979	True	NM_080651,NM_000127	chr8,chr8	+,-	MED30,EXT1	-2987,588129
chr12:109462356-109463192	chr12	+	109462356	109463236	True	NM_032663,NM_018711	chr12,chr12	+,-	USP30,SVOP	27143,-3511
chr20:46034845-46036576	chr20	+	46035054	46036395	True	NM_183048,NR_024594	chr20,chr20	-,+	ZMYND8,LOC100131496	-49580,-87859
chr8:37477579-37478408	chr8	+	37477724	37478420	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	74880,127200
chr14:64855459-64856145	chr14	+	64855517	64856157	True	NM_005956,NR_033777	chr14,chr14	+,-	MTHFD1,TEX21P	-816,-41188
chr11:117665620-117665889	chr11	+	117665680	117665840	True	NM_020693,NM_001558	chr11,chr11	-,+	DSCAML1,IL10RA	2186,191265
chr6:45348605-45348954	chr6	+	45348616	45348974	True	NM_004348,NM_181356,NM_003599	chr6,chr6,chr6	+,-,-	RUNX2,SUPT3H,SUPT3H	40939,-2946,-3041
chr9:138592955-138593778	chr9	+	138593156	138593820	True	NM_020822,NM_001012415,NM_001101677	chr9,chr9,chr9	+,-,-	KCNT1,SOHLH1,SOHLH1	210,-1782,-1782
chr16:28609498-28610264	chr16	+	28609514	28609776	True	NM_138414,NM_177528,NM_001054	chr16,chr16,chr16	+,-,-	CCDC101,SULT1A2,SULT1A2	-44318,-1713,-1123
chr8:37798918-37799137	chr8	+	37799053	37799133	True	NM_004095,NM_152413	chr8,chr8	+,-	EIF4EBP1,GOT1L1	88886,-1406
chr17:16593225-16593765	chr17	+	16593461	16593619	True	NM_020787,NM_014695	chr17,chr17	-,+	ZNF624,CCDC144A	-36294,19
chr3:58222709-58223100	chr3	+	58222723	58223075	True	NM_020676,NM_004944	chr3,chr3	+,-	ABHD6,DNASE1L3	183,-22325
chr22:50493937-50494216	chr22	+	50494146	50494264	True	NM_139202,NM_001164104	chr22,chr22	-,+	MLC1,MOV10L1	29567,34170
chr19:18656602-18657074	chr19	+	18656784	18656938	True	NM_012181,NM_001171948	chr19,chr19	-,+	FKBP8,C19orf50	-2401,11633
chr20:33681606-33682073	chr20	+	33681610	33681672	True	NM_006404,NM_015638,NM_199368	chr20,chr20,chr20	+,-,-	PROCR,TRPC4AP,TRPC4AP	78101,-992,-992
chr13:98085222-98085544	chr13	+	98085256	98085474	True	NM_080818,NM_021033	chr13,chr13	-,+	OXGR1,RAP2A	-438652,1000
chrX:100911182-100911543	chrX	+	100911196	100911452	True	NM_014782,NM_177949,NM_177948	chrX,chrX,chrX	-,-,+	ARMCX2,ARMCX2,ARMCX3	3461,3461,-32906
chr18:14544203-14544528	chr18	+	14544230	14544526	True	NM_001137671,NM_001145029	chr18,chr18	-,+	POTEC,ANKRD30B	-631,203712
chr18:14544203-14544528	chr15	+	21072685	21072981	False	NM_207355,NR_027411	chr15,chr15	-,+	POTEB,GOLGA8C	-708,-305183
chr18:14544203-14544528	chr15	+	22083846	22084142	False	NR_015416,NM_207355	chr15,chr15	+,-	LOC727924,POTEB	193889,-709
chr2:75058625-75060517	chr2	+	75058895	75060212	True	NM_138804,NM_000189	chr2,chr2	-,+	C2orf65,HK2	-183731,142
chr8:8869226-8870683	chr8	+	8869290	8870534	True	NM_153332,NM_004225	chr8,chr8	+,-	ERI1,MFHAS1	-9035,-118159
chr20:23109589-23110353	chr20	+	23109606	23110262	True	NR_034149,NM_001052	chr20,chr20	-,+	LOC200261,SSTR4	3061,-93600
chr7:150384406-150385512	chr7	+	150384649	150385561	True	NM_015660,NR_024115	chr7,chr7	+,-	GIMAP2,GIMAP6	-1914,-54969
chr1:179713589-179714160	chr1	+	179713660	179714160	True	NM_173509,NM_001199260	chr1,chr1	+,-	FAM163A,TOR1AIP2	-1413,132831
chr1:217807593-217809196	chr1	+	217807657	217809207	True	NM_138796,NM_018040	chr1,chr1	+,-	SPATA17,GPATCH2	-3015,-3248
chr16:57567891-57568926	chr16	+	57567931	57568859	True	NM_153837,NM_033212	chr16,chr16	+,-	GPR114,CCDC102A	7741,1668
chr7:28218547-28218905	chr7	+	28218546	28218894	True	NR_034097,NM_175061	chr7,chr7	+,-	LOC100128081,JAZF1	1181,1593
chr17:40894602-40895279	chr17	+	40894738	40894889	True	NM_005854,NM_001991	chr17,chr17	+,-	RAMP2,EZH1	18322,2239
chr1:25577354-25577951	chr1	+	25577606	25577771	True	NM_001127691,NM_020317	chr1,chr1	+,-	RHD,C1orf63	21209,-3621
chr7:99422450-99422711	chr7	+	99422503	99422712	True	NM_022820,NM_057095,NM_057096,NM_017460	chr7,chr7,chr7,chr7	+,+,+,-	CYP3A43,CYP3A43,CYP3A43,CYP3A4	2923,2923,2923,-40692
chr6:42124265-42124861	chr6	+	42124307	42124827	True	NM_001164446,NM_000409	chr6,chr6	-,+	C6orf132,GUCA1A	-13592,-1214
chr22:38299884-38300599	chr22	+	38300507	38300635	True	NM_032561,NM_033386	chr22,chr22	-,+	C22orf23,MICALL1	49018,1710
chr3:195868087-195869663	chr3	+	195868113	195869648	True	NR_034088,NM_001128148	chr3,chr3	+,-	LOC401109,TFRC	138,-59081
chr6:112417613-112418286	chr6	+	112417861	112418332	True	NM_016262,NM_001033564	chr6,chr6	-,+	TUBE1,C6orf225	-9110,-9246
chr17:7155620-7155852	chr17	+	7155708	7155892	True	NM_015343,NM_007278,NM_203415,NM_203414,NM_203413,NM_015362,NM_001143775	chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,+,+,+,-	CTDNEP1,GABARAP,C17orf81,C17orf81,C17orf81,C17orf81,CTDNEP1	-449,-9955,-395,-216,-216,-216,-713
chr3:37183210-37183857	chr3	+	37183224	37183540	True	NM_001172713,NM_001134369	chr3,chr3	+,-	GOLGA4,LRRFIP2	101141,34361
chr17:33287145-33288081	chr17	+	33287188	33288054	True	NM_052857,NM_006584,NM_001193530,NM_001193529	chr17,chr17,chr17,chr17	+,-,-,-	ZNF830,CCT6B,CCT6B,CCT6B	494,532,532,532
chr12:6057193-6057974	chr12	+	6057232	6057835	True	NM_020373,NM_001769	chr12,chr12	-,+	ANO2,CD9	-1834,251646
chr2:107077225-107078630	chr2	+	107077814	107078603	True	NM_001144013,NR_003506	chr2,chr2	-,+	RGPD3,PLGLA	6248,-75100
chr19:18117239-18117658	chr19	+	18117594	18117682	True	NM_015683,NM_001025604,NM_005535	chr19,chr19,chr19	+,+,-	ARRDC2,ARRDC2,IL12RB1	1294,-5701,80065
chr1:85722404-85723507	chr1	+	85722717	85723376	True	NR_024113,NM_145172,NM_198077	chr1,chr1,chr1	-,+,-	C1orf52,WDR63,C1orf52	2040,-194775,2040
chr16:4475962-4476218	chr16	+	4476063	4476233	True	NM_005147,NM_001135110,NM_024535,NM_001201473,NM_001201472,NM_001201479	chr16,chr16,chr16,chr16,chr16,chr16	+,+,-,-,-,-	DNAJA3,DNAJA3,CORO7,CORO7,CORO7,CORO7-PAM16	-256,-256,-9101,-9101,-9101,-9101
chr10:105679051-105680866	chr10	+	105679081	105680903	True	NM_024928,NM_014720	chr10,chr10	-,+	OBFC1,SLK	-1036,46566
chrX:152710971-152711224	chrX	+	152711086	152711150	True	NM_080701,NM_001136273	chrX,chrX	-,+	TREX2,ZFP92	845,-27356
chr19:3984201-3984701	chr19	+	3984261	3984650	True	NR_002602,NM_015897,NM_001961	chr19,chr19,chr19	-,+,-	SNORD37,PIAS4,EEF2	-1691,23098,868
chr9:42856558-42857349	chr9	+	42856852	42857316	True	NR_026759,NR_026558	chr9,chr9	-,+	FAM95B1,AQP7P3	176046,835
chr9:42856558-42857349	chr9	-	69652037	69652501	False	NM_001085457,NR_024443	chr9,chr9	-,+	CBWD6,LOC100133920	-389444,-727
chr9:42856558-42857349	chr9	+	67029841	67030305	False	NR_024443,NR_024496	chr9,chr9	-,+	LOC100133920,LOC442421	727,-535623
chr9:42856558-42857349	chr9	-	67290086	67290550	False	NM_032250,NR_002817	chr9,chr9	+,-	ANKRD20A1,AQP7P1	636210,-594
chr17:26645570-26645890	chr17	+	26645576	26645938	True	NM_014573,NR_028334	chr17,chr17	+,-	TMEM97,FLJ40504	182,-11168
chr15:99791414-99791614	chr15	+	99791449	99791537	True	NM_001040658,NM_001040659,NM_001040656,NM_001040657,NM_001040655,NM_144598,NM_022905,NM_001040660	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,-,-,-,+,-,-	TTC23,TTC23,TTC23,TTC23,TTC23,LRRC28,TTC23,TTC23	-1634,-1634,-1634,-1634,-1634,114,-1634,-1634
chr3:119324060-119325341	chr3	+	119324283	119325383	True	NM_005191,NM_015900	chr3,chr3	-,+	CD80,PLA1A	-45802,-7614
chr22:36878532-36878794	chr22	+	36878669	36878808	True	NM_012473,NM_145343	chr22,chr22	-,+	TXN2,APOL1	-982,-229603
chr1:171290938-171291914	chr1	+	171290968	171291685	True	NM_002022,NR_031627	chr1,chr1	+,-	FMO4,MIR1295	-7534,-220021
chr3:197460059-197460846	chr3	+	197460435	197460830	True	NM_001011537,NM_014687	chr3,chr3	+,-	FYTTD1,KIAA0226	15593,3006
chr6:53213218-53213422	chr6	+	53213227	53213361	True	NM_012347,NM_021814	chr6,chr6	+,-	FBXO9,ELOVL5	-277507,631
chr16:66396042-66396914	chr16	+	66396063	66396855	True	NM_001795,NM_001172643	chr16,chr16	+,-	CDH5,TK2	3669,187389
chr12:106534215-106535962	chr12	+	106534279	106535673	True	NM_014840,NM_152772	chr12,chr12	-,+	NUAK1,TCP11L2	-468,160907
chr1:15568651-15569170	chr1	+	15568783	15569215	True	NM_052929,NR_027136	chr1,chr1	+,-	FHAD1,C1orf126	4552,-89823
chr13:77458953-77459493	chr13	+	77459079	77459497	True	NR_026983,NM_138444	chr13,chr13	+,-	BTF3P11,KCTD12	43087,1093
chr5:138723698-138724160	chr5	+	138723763	138724207	True	NM_001033112,NM_016459,NM_005847,NM_152685,NM_001161546	chr5,chr5,chr5,chr5,chr5	+,-,-,-,-	PAIP2,MZB1,SLC23A1,SLC23A1,LOC389333	-45680,1448,-4724,-4724,6728
chrX:54470967-54471221	chrX	+	54470986	54471158	True	NM_004463,NM_058163	chrX,chrX	-,+	FGD1,TSR2	51491,-4184
chr9:706080-706771	chr9	+	706171	706736	True	NM_152569,NM_153186	chr9,chr9	-,+	C9orf66,KANK1	-490278,159
chr12:81306214-81307322	chr12	+	81306864	81307338	True	NR_030349,NM_024560	chr12,chr12	-,+	MIR618,ACSS3	22324,164470
chr1:12566180-12566787	chr1	+	12566206	12566797	True	NR_003025,NM_004753,NR_003022	chr1,chr1,chr1	+,-,+	SNORA59A,DHRS3,SNORA59B	502,111076,502
chr16:79818319-79818817	chr16	+	79818484	79818610	True	NM_005360,NM_130897	chr16,chr16	-,+	MAF,DYNLRB2	-183862,756243
chr7:150652637-150652911	chr7	+	150652765	150652907	True	NM_172057,NM_000603,NM_001204798	chr7,chr7,chr7	-,+,-	KCNH2,NOS3,KCNH2	60,35236,60
chr17:42079565-42080744	chr17	+	42079866	42080710	True	NM_004160,NM_153006	chr17,chr17	-,+	PYY,NAGS	1184,1321
chr16:57731745-57732101	chr16	+	57731824	57732070	True	NM_001130099,NM_032269	chr16,chr16	-,+	KIFC3,CCDC135	99909,-3162
chr1:6685822-6686760	chr1	+	6685821	6686517	True	NM_014851,NM_001195752,NM_001195753,NM_138350	chr1,chr1,chr1,chr1	-,+,+,+	KLHL21,THAP3,THAP3,THAP3	-22892,-662,-947,-662
chr11:10315834-10316293	chr11	+	10316120	10316300	True	NM_030962,NM_001124	chr11,chr11	-,+	SBF2,ADM	-366,10341
chr14:74053021-74054179	chr14	+	74053667	74054001	True	NM_152331,NM_203309	chr14,chr14	+,-	ACOT4,HEATR4	4408,-28016
chr10:125802761-125803652	chr10	+	125802823	125803305	True	NM_015892,NM_001167880	chr10,chr10	-,+	CHST15,LHPP	48675,347035
chr6:43601605-43602388	chr6	+	43601624	43602263	True	NM_014628,NM_001003690,NM_019096	chr6,chr6,chr6	+,+,-	MAD2L1BP,MAD2L1BP,GTPBP2	1313,-4397,-4688
chr6:139310024-139311553	chr6	+	139310063	139311563	True	NM_001128617,NM_031922,NM_021243	chr6,chr6,chr6	-,-,+	REPS1,REPS1,C6orf115	-665,-665,38255
chr19:58790000-58790335	chr19	+	58790087	58790365	True	NM_021089,NM_130786	chr19,chr19	+,-	ZNF8,A1BG	34,74550
chr2:32264549-32264866	chr2	+	32264553	32264905	True	NM_032574,NM_014946	chr2,chr2	-,+	DPY30,SPAST	-11,23774
chr5:60928416-60930249	chr5	+	60928501	60930152	True	NM_001048249,NM_173667	chr5,chr5	-,+	C5orf43,FLJ37543	-470199,3483
chr6:167585002-167585508	chr6	+	167585018	167585506	True	NM_005299,NM_001145121	chr6,chr6	-,+	GPR31,TCP10L2	-13699,-988
chr6:167585002-167585508	chr6	-	167796568	167797059	False	NM_004610,NM_031949	chr6,chr6	-,+	TCP10,TTLL2	989,-58045
chr19:7765787-7766472	chr19	+	7766055	7766513	True	NM_001042461,NM_002002	chr19,chr19	+,-	TRAPPC5,FCER2	-20342,569
chr17:10426169-10427953	chr17	+	10426575	10427796	True	NM_005963,NM_020233	chr17,chr17	-,+	MYH1,C17orf48	-4716,173130
chr1:159896024-159897532	chr1	+	159896135	159897411	True	NM_003564,NM_020125	chr1,chr1	-,+	TAGLN2,SLAMF8	-851,-99707
chr20:61735824-61736301	chr20	+	61735978	61736276	True	NR_003245,NR_003244	chr20,chr20	-,+	HAR1B,HAR1A	-2307,-3385
chr9:35650524-35650951	chr9	+	35650538	35650892	True	NM_014450,NM_001195201,NM_001195200,NR_003051,NM_001195217,NM_174923	chr9,chr9,chr9,chr9,chr9,chr9	-,+,+,-,+,+	SIT1,CCDC107,CCDC107,RMRP,CCDC107,CCDC107	105,7394,7394,7173,7394,7394
chr19:14526987-14528153	chr19	+	14527211	14528102	True	NM_001204057,NM_005804,NM_002741	chr19,chr19,chr19	-,-,+	DDX39A,DDX39A,PKN1	1856,2145,16063
chr11:47209027-47210729	chr11	+	47209139	47210073	True	NM_000107,NM_001184974,NM_001184975,NM_016223	chr11,chr11,chr11,chr11	+,-,-,-	DDB2,PACSIN3,PACSIN3,PACSIN3	26419,-1129,-1707,-1129
chr10:104192300-104192723	chr10	+	104192404	104192624	True	NM_024040,NR_030169	chr10,chr10	-,+	CUEDC2,MIR146B	19,3644
chr3:124775080-124775413	chr3	+	124775144	124775438	True	NM_020733,NR_033437	chr3,chr3	-,+	HEG1,UMPS	-342,-325982
chr5:56110370-56110782	chr5	+	56110430	56110781	True	NM_152622,NM_005921	chr5,chr5	-,+	MIER3,MAP3K1	137223,118
chr15:75934103-75935409	chr15	+	75934602	75935458	True	NM_153271,NM_018285	chr15,chr15	+,-	SNX33,IMP3	5889,-1938
chr1:109396046-109396275	chr1	+	109396060	109396265	True	NM_152763,NR_034168	chr1,chr1	-,+	AKNAD1,LOC642864	3502,3573
chr14:102554173-102554375	chr14	+	102554179	102554251	True	NM_181302,NM_005348	chr14,chr14	+,-	WDR20,HSP90AA1	51960,-667
chr20:44458273-44459935	chr20	+	44458560	44459463	True	NM_003279,NM_033421,NM_001042632,NM_001042633,NM_152897	chr20,chr20,chr20,chr20,chr20	-,+,+,+,+	TNNC2,SNX21,SNX21,SNX21,SNX21	-2607,3006,3006,3006,3006
chr8:136468327-136468768	chr8	+	136468346	136468690	True	NR_029599,NM_006558	chr8,chr8	-,+	MIR30D,KHDRBS3	-651158,1025
chr16:89623532-89624013	chr16	+	89623606	89623968	True	NM_033251,NR_002450,NM_000977,NM_013275	chr16,chr16,chr16,chr16	+,+,+,-	RPL13,SNORD68,RPL13,ANKRD11	3162,3869,3121,-66637
chr21:43432615-43434315	chr21	+	43432658	43434334	True	NR_027273,NM_020727,NM_001098402,NM_001098403	chr21,chr21,chr21,chr21	+,-,-,-	C21orf121,ZNF295,ZNF295,ZNF295	7778,-2162,-2162,-2162
chr7:100859755-100860110	chr7	+	100859966	100860132	True	NM_001084,NM_006349	chr7,chr7	-,+	PLOD3,ZNHIT1	929,852
chr21:46213367-46214658	chr21	+	46213383	46214287	True	NM_182688,NM_003343,NM_198699,NM_001202489	chr21,chr21,chr21,chr21	-,-,+,-	UBE2G2,UBE2G2,KRTAP10-12,UBE2G2	7520,7520,-96347,7520
chr6:109762250-109762510	chr6	+	109762320	109762500	True	NM_173672,NM_003080,NM_001111298	chr6,chr6,chr6	-,+,-	PPIL6,SMPD2,PPIL6	22,-440,22
chr4:83795826-83797354	chr4	+	83795853	83796984	True	NM_024672,NM_001191049	chr4,chr4	+,-	THAP9,SEC31A	24852,15414
chr21:22397695-22398490	chr21	+	22397727	22398533	True	NM_004540,NR_024090	chr21,chr21	+,-	NCAM2,C21orf131	-27145,-222301
chr14:74036874-74037195	chr14	+	74036930	74036996	True	NM_203309,NM_006821	chr14,chr14	-,+	HEATR4,ACOT2	-11279,-1209
chr14:74036874-74037195	chr14	+	74004974	74005037	False	NM_203309,NM_001037161	chr14,chr14	-,+	HEATR4,ACOT1	20665,-1097
chr1:12567121-12567817	chr17	+	19460957	19461007	True	NR_003025,NM_001099646,NR_003022	chr17,chr17,chr17	+,-,+	SNORA59A,SLC47A2,SNORA59B	-135,159086,-135
chr6:152633216-152633999	chr6	+	152633877	152634046	True	NM_025107,NM_015293	chr6,chr6	+,-	MYCT1,SYNE1	384983,5483
chr22:39023902-39024311	chr22	+	39024095	39024335	True	NM_001002880,NM_001013647	chr22,chr22	+,-	CBY1,LOC646851	28322,28349
chr8:61190985-61192644	chr8	+	61191164	61192402	True	NM_004056,NM_002865	chr8,chr8	-,+	CA8,RAB2A	1602,237156
chr12:119776599-119777584	chr12	+	119776725	119777310	True	NR_024246,NM_178499	chr12,chr12	-,+	LOC144742,CCDC60	-35540,-4260
chr15:39873935-39874435	chr15	+	39873982	39874436	True	NM_152597,NM_003246	chr15,chr15	-,+	FSIP1,THBS1	200653,-753
chr3:129393970-129395962	chr3	+	129394109	129395764	True	NM_153833,NR_033361	chr3,chr3	+,-	H1FOO,TMCC1	-132111,11864
chr19:57999503-58000297	chr19	+	57999853	58000323	True	NM_024691,NM_001144068,NM_001098491,NM_001098493,NM_001098492,NM_001098495,NM_001098494,NM_001098496	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+,+,+	ZNF419,ZNF772,ZNF419,ZNF419,ZNF419,ZNF419,ZNF419,ZNF419	-827,-10915,-827,-827,-827,-827,-827,-827
chr3:48723793-48724580	chr3	+	48723909	48724237	True	NM_016453,NM_033629,NM_184231	chr3,chr3,chr3	-,+,-	NCKIPSD,TREX1,NCKIPSD	-575,-216733,-575
chr19:48306689-48307537	chr19	+	48306785	48307535	True	NM_198479,NM_000554	chr19,chr19	-,+	TPRX1,CRX	22,17563
chr19:48306689-48307537	chr19	-	48362764	48363514	False	NM_003167,NM_000554	chr19,chr19	-,+	SULT2A1,CRX	26190,-37716
chr6:49463791-49464399	chr6	+	49463896	49464334	True	NM_000255,NM_001010904	chr6,chr6	-,+	MUT,GLYATL3	-32855,3336
chr16:28623392-28623733	chr16	+	28623437	28623653	True	NM_177529,NM_138414,NM_001055,NM_177530,NM_177534	chr16,chr16,chr16,chr16,chr16	-,+,-,-,-	SULT1A1,CCDC101,SULT1A1,SULT1A1,SULT1A1	-2080,-58239,-2080,-2788,-2788
chr16:28623392-28623733	chr16	+	28610443	28610659	False	NM_138414,NM_177528,NM_001054	chr16,chr16,chr16	+,-,-	CCDC101,SULT1A2,SULT1A2	-45245,-2642,-2052
chr1:27241312-27241911	chr1	+	27241602	27241890	True	NM_021969,NM_006600	chr1,chr1	-,+	NR0B2,NUDC	-1035,6333
chr6:26360739-26361784	chr6	+	26360936	26361806	True	NM_003543,NM_007047,NM_001197248,NM_001197249,NM_001197246,NM_001197247	chr6,chr6,chr6,chr6,chr6,chr6	-,+,+,+,+,+	HIST1H4H,BTN3A2,BTN3A2,BTN3A2,BTN3A2,BTN3A2	-75209,3591,3663,3591,6599,3591
chr22:27054666-27055215	chr22	+	27054753	27055261	True	NR_033321,NR_003491,NR_033320,NM_001887,NR_033319	chr22,chr22,chr22,chr22,chr22	+,+,+,-,+	MIAT,MIAT,MIAT,CRYBB1,MIAT	-1358,-1358,-1358,-40762,-1358
chr7:66456708-66457155	chr7	+	66456841	66457163	True	NM_018264,NM_016038	chr7,chr7	+,-	TYW1,SBDS	4653,3485
chr1:187415564-187417217	chr1	+	187415912	187417201	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-766353,-617944
chr5:149573369-149573712	chr5	+	149573442	149573691	True	NM_002609,NM_014228	chr5,chr5	-,+	PDGFRB,SLC6A7	-38020,-3973
chr1:11321451-11322257	chr1	+	11321581	11322230	True	NM_004958,NM_013319	chr1,chr1	-,+	MTOR,UBIAD1	429,11024
chr19:29431345-29432020	chr19	+	29431419	29431869	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	24168,272317
chrX:151900023-151900853	chrX	+	151900178	151900584	True	NM_001166387,NM_001166386,NM_001102576,NM_005367,NM_153478	chrX,chrX,chrX,chrX,chrX	-,-,+,-,+	MAGEA12,MAGEA12,CSAG1,MAGEA12,CSAG1	2650,2567,2643,2650,2643
chr22:36632726-36633279	chr22	+	36632785	36633310	True	NM_030882,NM_145637,NM_001136540	chr22,chr22,chr22	-,-,+	APOL2,APOL2,APOL1	2429,2740,15806
chr10:99498264-99500217	chr10	+	99498401	99500079	True	NM_001002261,NM_001002262,NM_001174120,NM_001174119,NM_001174121,NM_001174122,NM_144588,NR_026754	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,+,+,-	ZFYVE27,ZFYVE27,ZFYVE27,ZFYVE27,ZFYVE27,ZFYVE27,ZFYVE27,LOC100270710	-218,-1574,-1574,-1574,-1574,-1574,-1574,-20499
chr11:64825517-64825819	chr11	+	64825536	64825846	True	NM_005468,NM_013299	chr11,chr11	-,+	NAALADL1,SAC3D1	213,-17211
chr1:161137198-161137856	chr1	+	161137219	161137715	True	NM_000309,NM_001199873,NM_012475,NM_001014443,NM_001122764	chr1,chr1,chr1,chr1,chr1	+,-,+,+,+	PPOX,B4GALT3,USP21,USP21,PPOX	-1089,10093,-8016,-8016,-1089
chr3:12202056-12202445	chr3	+	12202069	12202401	True	NM_003256,NM_005037	chr3,chr3	-,+	TIMP4,PPARG	-1218,126947
chr20:56134468-56135388	chr20	+	56134479	56135128	True	NM_080618,NM_002591	chr20,chr20	-,+	CTCFL,PCK1	-34325,1008
chr2:97483247-97483979	chr2	+	97483359	97483786	True	NM_017623,NM_144994,NM_199078	chr2,chr2,chr2	+,-,+	CNNM3,ANKRD23,CNNM3	-1419,26022,-1419
chr2:61644180-61644967	chr2	+	61644207	61644741	True	NM_152392,NR_003707	chr2,chr2	+,-	AHSA2,SNORA70B	-239703,5
chr19:9786015-9786301	chr19	+	9786015	9786125	True	NM_001048241,NM_017656,NM_001130032,NM_001130031	chr19,chr19,chr19,chr19	+,-,-,-	UBL5,ZNF562,ZNF562,ZNF562	152442,-239,-239,-239
chr20:38654168-38655438	chr20	+	38654175	38655465	True	NM_003286,NM_005461	chr20,chr20	+,-	TOP1,MAFB	1001996,662468
chr16:90090730-90091912	chr16	+	90090828	90091792	True	NM_001042610,NM_001214,NR_023348	chr16,chr16,chr16	-,-,+	DBNDD1,C16orf3,GAS8	-4891,4574,-1886
chr20:48768318-48769691	chr20	+	48768443	48769099	True	NM_001162505,NM_199129,NR_027889,NM_005194,NM_199203	chr20,chr20,chr20,chr20,chr20	-,-,-,+,-	TMEM189,TMEM189,TMEM189,CEBPB,TMEM189-UBE2V1	1286,1286,1286,38276,1286
chr13:46039625-46040263	chr13	+	46039748	46040147	True	NM_001204476,NM_001010875,NM_031431	chr13,chr13,chr13	+,-,+	COG3,SLC25A30,COG3	-769,-47232,-769
chrY:2802215-2803031	chrY	+	2802303	2802984	True	NM_003411,NM_001145275,NM_001145276,NM_003140	chrY,chrY,chrY,chrY	+,+,+,-	ZFY,ZFY,ZFY,SRY	533,533,127,-146511
chr22:23922197-23922974	chr22	+	23922238	23923018	True	NM_153615,NM_152855,NM_020070	chr22,chr22,chr22	+,-,-	RGL4,IGLL1,IGLL1	110029,67,67
chr4:48782991-48783541	chr4	+	48783074	48783484	True	NM_001079840,NM_015030	chr4,chr4	+,-	OCIAD1,FRYL	49575,-758
chr9:132084615-132085215	chr9	+	132084621	132085235	True	NM_001012715,NM_203434	chr9,chr9	+,-	C9orf106,IER5L	-1377,-144081
chr4:83799003-83799684	chr4	+	83799213	83799735	True	NM_024672,NM_001191049	chr4,chr4	+,-	THAP9,SEC31A	22101,12657
chr17:16117159-16117364	chr17	+	16117272	16117341	True	NM_006311,NM_004278	chr17,chr17	-,+	NCOR1,PIGL	1590,3167
chr6:47445650-47446015	chr6	+	47445762	47446030	True	NM_014452,NM_012120	chr6,chr6	-,+	TNFRSF21,CD2AP	-168082,-288
chr4:3465065-3465336	chr4	+	3465073	3465282	True	NM_001164673,NM_002337,NM_173660	chr4,chr4,chr4	+,-,+	DOK7,LRPAP1,DOK7	-91,68992,-91
chr10:23480046-23480304	chr10	+	23480088	23480343	True	NM_153714,NM_178161	chr10,chr10	-,+	C10orf67,PTF1A	153479,1116
chrX:107335272-107335539	chrX	+	107335334	107335583	True	NM_002814,NM_178270,NM_052936,NM_170750	chrX,chrX,chrX,chrX	-,+,+,-	PSMD10,ATG4A,ATG4A,PSMD10	-460,-486,-486,-460
chr17:16120935-16122083	chr17	+	16121004	16121853	True	NM_004278,NM_006311	chr17,chr17	+,-	PIGL,NCOR1	-546,-2130
chrX:47007233-47008850	chrX	+	47007291	47008551	True	NR_024235,NR_024234,NM_019056,NM_001135998,NM_005676,NM_001204467,NM_001204466,NM_152856,NM_001204468	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,+,+,+,+,+	NDUFB11,NDUFB11,NDUFB11,NDUFB11,RBM10,RBM10,RBM10,RBM10,RBM10	-2682,-2682,-3196,-3196,-2727,-2727,-2727,-2727,-2727
chr20:33264573-33264998	chr20	+	33264635	33264977	True	NM_080476,NM_021202	chr20,chr20	-,+	PIGU,TP53INP2	162,27170
chr19:56155933-56156398	chr19	+	56156068	56156350	True	NM_007279,NM_001012478,NM_016535,NM_016202,NM_013301,NM_001163423,NM_203374,NM_207115	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,+,-,+	U2AF2,U2AF2,ZNF581,ZNF580,CCDC106,ZNF580,ZNF784,ZNF580	9065,9065,-1133,-2701,2603,-2656,-20127,-3727
chr7:27308025-27309058	chr7	+	27308187	27309088	True	NM_001989,NM_000522	chr7,chr7	+,-	EVX1,HOXA13	-26074,-68462
chr1:157015982-157016200	chr1	+	157016033	157016231	True	NM_198236,NM_014784,NR_001560	chr1,chr1,chr1	-,-,+	ARHGEF11,ARHGEF11,CYCSP52	-871,-871,81922
chr6:35747448-35748261	chr6	+	35747547	35748069	True	NM_001010886,NM_207409,NM_001832	chr6,chr6,chr6	+,+,-	C6orf127,C6orf126,CLPS	761,-3206,17089
chr16:6821913-6822156	chr16	+	6821913	6822183	True	NM_201598,NM_001142334	chr16,chr16	-,+	FAM86A,RBFOX1	-1674124,1626
chr4:1339729-1340068	chr4	+	1339959	1340041	True	NM_001328,NM_020894	chr4,chr4	-,+	CTBP1,KIAA1530	-97051,1062
chr6:56815889-56817291	chr6	+	56815933	56817254	True	NM_152731,NM_183227	chr6,chr6	+,-	BEND6,RAB23	2518,269067
chr3:165509005-165510130	chr3	+	165509131	165509924	True	NM_000055,NM_001122752	chr3,chr3	-,+	BCHE,SERPINI1	45391,1943507
chr1:155211038-155212677	chr1	+	155211150	155212723	True	NM_000157,NM_001171812,NM_001171811,NM_198883,NM_001005742,NM_001005741	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,-	GBA,GBA,GBA,MTX1,GBA,GBA	-81,-84,1980,-32718,1980,1980
chr10:135185082-135185836	chr10	+	135185095	135185859	True	NM_207127,NM_152911,NM_004092,NR_037509,NM_207128	chr10,chr10,chr10,chr10,chr10	+,+,-,-,+	PAOX,PAOX,ECHS1,MIR3944,PAOX	6881,6881,1099,-42,6881
chr22:36046949-36047500	chr22	+	36047113	36047515	True	NM_203377,NM_030641	chr22,chr22	-,+	MB,APOL6	-27712,-2741
chr8:7286592-7286871	chr8	+	7286617	7286849	True	NM_018661,NM_001040703,NM_001081551	chr8,chr8,chr8	-,+,-	DEFB103B,DEFB105B,DEFB103A	884,58393,1072
chr8:7286592-7286871	chr8	-	7739746	7739978	False	NM_152250,NM_018661,NM_001081551	chr8,chr8,chr8	-,+,+	DEFB105A,DEFB103B,DEFB103A	-58386,-884,-1072
chr11:34127436-34127948	chr11	+	34127495	34127889	True	NM_001144030,NM_024662,NM_005574	chr11,chr11,chr11	+,+,-	NAT10,NAT10,LMO2	-435,-435,-213659
chrX:1333471-1333748	chrY	+	1283475	1283721	False	NM_022148,NM_001161531,NM_001012288	chrY,chrY,chrY	-,+,-	CRLF2,CSF2RA,CRLF2	-1945,53971,-1948
chrX:1333471-1333748	chrX	+	1333475	1333721	True	NM_022148,NM_001161531,NM_001012288	chrX,chrX,chrX	-,+,-	CRLF2,CSF2RA,CRLF2	-1945,53971,-1948
chr17:58503440-58504163	chr17	+	58503518	58504153	True	NM_181707,NM_032582	chr17,chr17	+,-	C17orf64,USP32	-3704,-33932
chr11:69292907-69293792	chr11	+	69292941	69293694	True	NM_153451,NM_053056	chr11,chr11	-,+	ORAOV1,CCND1	196530,162178
chr10:35487373-35487931	chr10	+	35487554	35487648	True	NM_182717,NM_001198777,NM_182718,NM_182719,NM_182725,NM_182724,NM_182723,NM_182722,NM_182721,NM_182720	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,-,+,+,+,+,+,+,+,+	CREM,CUL2,CREM,CREM,CREM,CREM,CREM,CREM,CREM,CREM	-3561,-107984,-3561,-3561,-2786,-2786,-2786,-2786,-2786,-3561
chrX:153746755-153747304	chrX	+	153746803	153747361	True	NM_001171134,NM_021806,NM_001171132,NM_001171133,NM_001099856,NR_033237	chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,+,-	FAM3A,FAM3A,FAM3A,FAM3A,IKBKG,FAM3A	-2237,-2237,-2237,-2237,23097,-2237
chr7:137688906-137690339	chr7	+	137689118	137690295	True	NM_194071,NM_001190906	chr7,chr7	-,+	CREB3L2,AKR1D1	-2272,70882
chr1:156588493-156589029	chr1	+	156588674	156588956	True	NM_182679,NM_021817	chr1,chr1	-,+	GPATCH4,HAPLN2	-17395,129
chrX:85338997-85339914	chrX	+	85339551	85339865	True	NM_001145414,NM_001139514	chrX,chrX	-,+	CHM,DACH2	-36985,63589
chr4:144478227-144479235	chr4	+	144478286	144479076	True	NM_001168235,NR_003675	chr4,chr4	-,+	FREM3,LOC441046	142802,1548
chr3:101495253-101495639	chr3	+	101495346	101495486	True	NM_145037,NM_001134456,NM_000986	chr3,chr3,chr3	+,+,-	FAM55C,FAM55C,RPL24	2542,2799,-89783
chr2:25016743-25017123	chr2	+	25016788	25017104	True	NM_001013663,NM_001199803,NM_024322	chr2,chr2,chr2	-,+,+	C2orf79,CENPO,CENPO	-537,-664,-508
chr7:98029395-98029985	chr7	+	98029394	98029454	True	NM_001159491,NM_018842	chr7,chr7	+,-	BRI3,BAIAP2L1	-118466,1023
chr3:51703952-51704269	chr3	+	51704133	51704309	True	NM_015926,NM_001129884,NR_024012,NM_001143833	chr3,chr3,chr3,chr3	+,+,+,-	TEX264,TEX264,TEX264,IQCF6	912,912,912,108944
chrX:74494688-74495704	chrX	+	74494798	74495519	True	NM_145052,NM_004299,NR_030774	chrX,chrX,chrX	+,-,+	UPRT,ABCB7,UPRT	-957,-118666,-957
chr9:117879040-117880434	chr9	+	117879049	117880297	True	NM_017418,NM_002160	chr9,chr9	+,-	DEC1,TNC	23799,239
chr19:7810087-7810488	chr19	+	7810215	7810383	True	NM_021155,NM_001144893,NM_001144897,NM_001144896,NM_001144895,NM_001144894,NR_026692,NM_001144899,NM_001144904	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,-,+	CD209,CD209,CD209,CD209,CD209,CD209,CD209,CD209,CLEC4M	2131,2131,2131,2131,2131,2131,2131,2131,17651
chrX:47050938-47051336	chrX	+	47050992	47051354	True	NM_003334,NM_153280,NR_024235	chrX,chrX,chrX	+,+,-	UBA1,UBA1,NDUFB11	1846,-844,-46383
chr4:47079195-47080097	chr4	+	47079197	47079701	True	NM_000809,NM_000812	chr4,chr4	-,+	GABRA4,GABRB1	-82773,-45960
chr3:32542604-32543593	chr3	+	32542758	32543507	True	NM_017801,NM_181472	chr3,chr3	-,+	CMTM6,CMTM7	946,-109661
chr2:6635157-6635685	chr2	+	6635251	6635605	True	NM_207315,NM_080657	chr2,chr2	-,+	CMPK2,RSAD2	370381,382190
chr12:54072570-54073928	chr12	+	54072624	54073611	True	NM_001002031,NM_005176,NM_134324	chr12,chr12,chr12	-,-,+	ATP5G2,ATP5G2,TARBP2	-2112,-2515,-177301
chr13:50018690-50019784	chr13	+	50019046	50019466	True	NM_031915,NM_001079670,NM_001160308	chr13,chr13,chr13	+,-,+	SETDB2,CAB39L,SETDB2	-668,-825,6221
chr1:16398326-16398739	chr1	+	16398333	16398702	True	NM_182623,NM_001165945	chr1,chr1	-,+	FAM131C,CLCNKB	1480,-23100
chr10:6020328-6020902	chr10	+	6020352	6020934	True	NM_032807,NR_033494,NM_002189,NM_172200	chr10,chr10,chr10,chr10	+,-,-,-	FBXO18,IL15RA,IL15RA,IL15RA	-84054,-210,-778,-778
chr19:4537011-4537872	chr19	+	4537164	4537920	True	NM_052972,NM_032631,NM_001013706	chr19,chr19,chr19	-,+,-	LRG1,HDGFRP2,PLIN5	2166,-64960,-1956
chr19:11998976-11999502	chr19	+	11998986	11999493	True	NM_021915,NM_001080411	chr19,chr19	+,-	ZNF69,ZNF433	-367,147085
chr20:32950157-32950988	chr20	+	32950202	32950977	True	NM_031483,NM_001161766	chr20,chr20	+,-	ITCH,AHCY	84,-50594
chr3:51423735-51424939	chr3	+	51423795	51424445	True	NM_001171904,NM_006010,NM_013286	chr3,chr3,chr3	-,+,+	VPRBP,MANF,RBM15B	109623,-1154,4253
chr20:61429680-61430100	chr20	+	61429850	61430046	True	NM_007346,NM_018270,NM_006602	chr20,chr20,chr20	+,+,-	OGFR,C20orf20,TCFL5	6130,-2096,63119
chr11:72388185-72388473	chr11	+	72388202	72388474	True	NM_033388,NM_001146209,NM_002599	chr11,chr11,chr11	+,-,-	ATG16L2,PDE2A,PDE2A	136976,-8094,-2708
chr16:14403596-14403968	chr16	+	14403723	14403875	True	NR_029854,NM_001134477,NR_030177	chr16,chr16,chr16	+,-,+	MIR365-1,PARN,MIR193B	-641,320307,-5959
chr11:45828078-45829173	chr11	+	45828157	45828987	True	NM_018389,NM_001145266,NM_001145265,NM_001080446	chr11,chr11,chr11,chr11	+,+,+,-	SLC35C1,SLC35C1,SLC35C1,C11orf94	-1581,-2599,-2599,99896
chr20:32802787-32803933	chr20	+	32802786	32803720	True	NM_001672,NM_000687	chr20,chr20	+,-	ASIP,AHCY	44450,87553
chrX:14262355-14263506	chrX	+	14262365	14263021	True	NM_001118885,NM_017856	chrX,chrX	+,-	GLRA2,GEMIN8	284398,-214330
chr15:59729827-59730258	chr15	+	59729909	59730149	True	NM_152450,NM_004998	chr15,chr15	+,-	FAM81A,MYO1E	222,-64838
chr9:130331855-130332183	chr9	+	130332050	130332210	True	NM_001032221,NM_022833,NM_001035534	chr9,chr9,chr9	+,-,-	STXBP1,FAM129B,FAM129B	42275,-695,9108
chr16:90038723-90038923	chr16	+	90038764	90038912	True	NR_003227,NR_003226,NM_145039,NR_003228	chr16,chr16,chr16,chr16	+,+,-,+	AFG3L1P,AFG3L1P,CENPBD1,AFG3L1P	75,75,378,75
chr3:53903230-53904532	chr3	+	53903311	53904391	True	NM_022899,NM_018725	chr3,chr3	-,+	ACTR8,IL17RB	11888,-22792
chr17:2317202-2317953	chr17	+	2317251	2317971	True	NM_001098509,NR_028335	chr17,chr17	+,-	SGSM2,LOC284009	-76494,809
chr9:136149780-136150030	chr9	+	136149851	136149938	True	NM_000972,NM_020469	chr9,chr9	+,-	RPL7A,ABO	65130,743
chr22:24302446-24302737	chr22	+	24302465	24302635	True	NM_000854,NM_001080843,NM_001084393	chr22,chr22,chr22	-,-,+	GSTT2,GSTT2B,DDTL	808,783,6390
chr22:24302446-24302737	chr22	-	24323125	24323175	False	NM_001355,NM_000854,NM_001084392	chr22,chr22,chr22	-,+,-	DDT,GSTT2,DDT	-1106,-862,-6445
chr5:94617075-94619059	chr5	+	94617109	94618996	True	NM_152548,NM_024717	chr5,chr5	+,-	FAM81B,MCTP1	108051,1334
chr22:24979434-24979950	chr22	+	24979598	24980002	True	NM_207644,NM_013430	chr22,chr22	-,+	C22orf36,GGT1	9091,-29
chr12:109225241-109225955	chr12	+	109225308	109225744	True	NM_001917,NM_001161331	chr12,chr12	+,-	DAO,SSH1	48112,-3981
chr5:126340919-126342567	chr5	+	126341144	126342600	True	NM_001198557,NM_178450	chr5,chr5	+,-	LMNB1,MARCH3	-228350,23891
chr19:51737262-51737471	chr19	+	51737342	51737472	True	NM_001177608,NM_001772,NM_001082618,NM_001163922	chr19,chr19,chr19,chr19	+,+,+,-	CD33,CD33,CD33,VSIG10L	-9068,-9068,-9068,107956
chr15:41853766-41854440	chr15	+	41853879	41854373	True	NM_015540,NM_006293	chr15,chr15	-,+	RPAP1,TYRO3	-17415,-2710
chr4:2967993-2968570	chr4	+	2968170	2968556	True	NM_003703,NM_182982,NM_001004056,NM_001004057	chr4,chr4,chr4,chr4	-,+,+,+	NOP14,GRK4,GRK4,GRK4	-3052,-2880,-2880,-2880
chr1:185126656-185127307	chr1	+	185126705	185127241	True	NM_017673,NM_030934,NM_001105518,NM_001202423	chr1,chr1,chr1,chr1	+,-,+,-	SWT1,TRMT1L,SWT1,TRMT1L	-465,-589,-564,-475
chr11:16464735-16465482	chr11	+	16464772	16465262	True	NM_014267,NM_033326	chr11,chr11	+,-	C11orf58,SOX6	294885,32738
chr1:40973611-40974055	chr1	+	40973611	40974059	True	NM_022774,NM_014747	chr1,chr1	+,-	DEM1,RIMS3	373,157315
chr12:122708930-122709615	chr12	+	122708966	122709254	True	NM_030765,NR_024600,NM_138929,NM_019887,NR_024601	chr12,chr12,chr12,chr12,chr12	+,-,-,-,-	B3GNT4,DIABLO,DIABLO,DIABLO,DIABLO	-20789,2864,2864,2864,2864
chr2:120318053-120319924	chr2	+	120318302	120319942	True	NM_001029996,NM_002980	chr2,chr2	+,-	PCDP1,SCTR	-16331,-36274
chr16:56702171-56702651	chr16	+	56702304	56702626	True	NR_003669,NM_005950,NM_005951	chr16,chr16,chr16	+,-,+	MT1IP,MT1G,MT1H	7022,-327,1099
chr22:38840303-38841027	chr22	+	38840307	38841059	True	NM_016657,NM_004981	chr22,chr22	+,-	KDELR3,KCNJ4	23023,-274
chr1:205394764-205395897	chr1	+	205394784	205395826	True	NM_001199051,NM_001199050,NR_037583,NM_001199052,NM_002596,NM_001001552	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,+,-	LEMD1,LEMD1,LEMD1,LEMD1,CDK18,LEMD1	-3570,-3570,-3570,-3570,77857,-3570
chr12:31078800-31079081	chr12	+	31078834	31079058	True	NM_032156,NM_001080509	chr12,chr12	-,+	CAPRIN2,TSPAN11	-171386,779
chr1:55267264-55268470	chr1	+	55267422	55268221	True	NM_152607,NM_001114108,NM_001110533,NM_017904	chr1,chr1,chr1,chr1	+,-,+,-	C1orf177,TTC22,C1orf177,TTC22	3514,-481,3514,-481
chr14:93296383-93296985	chr14	+	93296665	93296905	True	NM_005606,NM_005113	chr14,chr14	-,+	LGMN,GOLGA5	-81618,-36070
chr11:2226164-2227488	chr11	+	2226224	2227544	True	NM_199293,NR_028044	chr11,chr11	-,+	TH,IGF2AS	-33189,-64517
chr1:37980942-37981820	chr1	+	37981019	37981601	True	NM_003462,NM_022756,NM_025079	chr1,chr1,chr1	+,-,+	DNALI1,MEAF6,ZC3H12A	40918,-655,-40958
chr9:99318309-99319264	chr9	+	99318309	99319281	True	NM_001077181,NM_014282	chr9,chr9	-,+	CDC14B,HABP4	9973,-105946
chr5:134093816-134094080	chr5	+	134093826	134093920	True	NM_014829,NM_016103	chr5,chr5	+,-	DDX46,SAR1B	540,-125293
chr5:10441040-10441870	chr5	+	10441133	10441833	True	NM_031916,NM_138809,NM_001201466	chr5,chr5,chr5	+,-,+	ROPN1L,CMBL,ROPN1L	140,-132965,140
chr17:41277571-41278579	chr17	+	41277650	41278375	True	NR_003108,NM_007299,NM_007298,NM_007297,NM_007294,NR_027676,NM_007300	chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,-,-,-,-	NBR2,BRCA1,BRCA1,BRCA1,BRCA1,BRCA1,BRCA1	-101,-182,-1518,-182,-150,-310,-150
chr3:36930815-36931431	chr3	+	36930884	36931448	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	55150,103392
chrX:130969013-130969701	chrX	+	130969181	130969527	True	NM_001042453,NR_026975	chrX,chrX	+,-	MST4,LOC286467	187717,-4510
chr17:12565833-12567153	chr17	+	12566237	12567135	True	NM_001146312,NM_153604,NM_001165962	chr17,chr17,chr17	+,+,-	MYOCD,MYOCD,ELAC2	2071,2071,354296
chr14:37666685-37667018	chr14	+	37666774	37667002	True	NM_138731,NM_030631,NM_001195297,NM_001195296	chr14,chr14,chr14,chr14	+,-,+,+	MIPOL1,SLC25A21,MIPOL1,MIPOL1	115,-24909,115,115
chr1:36539292-36539876	chr1	+	36539529	36539669	True	NM_005202,NM_014466	chr1,chr1	-,+	COL8A2,TEKT2	26239,10006
chr20:30640769-30641160	chr20	+	30640870	30641159	True	NM_030815,NM_002110,NM_001172129,NM_001172131,NM_001172130,NM_001172133,NM_001172132	chr20,chr20,chr20,chr20,chr20,chr20,chr20	-,+,+,+,+,+,+	PDRG1,HCK,HCK,HCK,HCK,HCK,HCK	-100987,-930,-930,-930,-930,-930,-930
chr10:45868148-45868801	chr10	+	45868148	45868796	True	NM_001004297,NM_000698	chr10,chr10	-,+	OR13A1,ALOX5	-57092,832
chr1:162598138-162599448	chr1	+	162598627	162599468	True	NM_001014796,NM_006182,NM_053282	chr1,chr1,chr1	+,+,-	DDR2,DDR2,SH2D1B	2759,2759,-216699
chr22:39238855-39239133	chr22	+	39238863	39239099	True	NM_014293,NM_145699	chr22,chr22	-,+	NPTXR,APOBEC3A	968,114427
chr19:42211568-42212244	chr19	+	42211677	42212287	True	NM_004363,NM_006890	chr19,chr19	+,-	CEACAM5,CEACAM7	242,-19581
chr17:17485482-17486097	chr17	+	17485606	17486095	True	NM_007169,NM_030665,NM_148172,NM_148173	chr17,chr17,chr17,chr17	-,+,-,-	PEMT,RAI1,PEMT,PEMT	-1,98691,8956,-4827
chr5:172388209-172389433	chr5	+	172388219	172389154	True	NM_016093,NR_026682,NR_026683	chr5,chr5,chr5	+,-,-	RPL26L1,LOC100268168,LOC100268168	-1831,-1848,-2441
chr9:131682548-131683130	chr9	+	131682687	131683059	True	NM_174933,NM_001100877,NM_001100876,NM_014908	chr9,chr9,chr9,chr9	+,+,+,-	PHYHD1,PHYHD1,PHYHD1,DOLK	114,1502,114,27003
chr2:229039121-229040867	chr2	+	229039192	229040896	True	NM_178821,NM_001142644,NM_030623	chr2,chr2,chr2	+,-,-	WDR69,SPHKAP,SPHKAP	-302916,5523,5523
chr1:228872830-228873470	chr1	+	228872879	228873502	True	NM_033445,NM_021205	chr1,chr1	-,+	HIST3H2A,RHOU	-227319,-2107
chr7:36724451-36724881	chr7	+	36724586	36724933	True	NM_018685,NM_001177506	chr7,chr7	+,-	ANLN,AOAH	-295213,39280
chr12:4222362-4222905	chr12	+	4222467	4222925	True	NM_001759,NM_020367	chr12,chr12	+,-	CCND2,PARP11	159976,-239859
chr4:184245077-184245619	chr4	+	184245094	184245390	True	NM_001111319,NM_001185149,NM_017632	chr4,chr4,chr4	-,-,+	CLDN22,CLDN24,CDKN2AIP	-3167,-1515,120398
chr15:25476991-25477781	chr15	+	25477070	25477740	True	NR_003353,NR_003358,NR_003345,NR_003497,NR_003346,NR_003344,NR_003352,NR_003351,NR_003347,NM_130838,NR_003354,NR_003303,NR_003348,NR_003349,NR_003350	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,-,+,+,+,+,+	SNORD115-38,SNORD115-43,SNORD115-30,HBII-52-28,SNORD115-31,SNORD115-29,SNORD115-37,SNORD115-36,SNORD115-32,UBE3A,SNORD115-39,SNORD115-11,SNORD115-33,SNORD115-34,SNORD115-35	7244,3491,-6771,-9620,-4865,3491,5392,3491,-3007,172963,9152,3491,-1136,202,1653
chr1:150510295-150510623	chr1	+	150510508	150510672	True	NM_001197320,NM_025008	chr1,chr1	-,+	MCL1,ADAMTSL4	41592,11225
chr10:105254384-105255002	chr10	+	105254622	105255050	True	NM_001129742,NM_004210	chr10,chr10	-,+	CALHM3,NEURL	-15625,-938
chr17:18127854-18128619	chr17	+	18128032	18128610	True	NM_004140,NM_002018	chr17,chr17	+,-	LLGL1,FLII	325,33495
chr10:29698507-29698727	chr10	+	29698540	29698722	True	NR_030335,NR_003930	chr10,chr10	-,+	MIR604,LOC387647	135354,-90
chr8:127569709-127570100	chr8	+	127569839	127570009	True	NM_001159542,NM_174911	chr8,chr8	+,-	POU5F1B,FAM84B	857847,752
chr4:55093780-55094417	chr4	+	55093781	55094343	True	NM_012110,NM_006206	chr4,chr4	-,+	CHIC2,PDGFRA	-162993,920
chr19:12775594-12776314	chr19	+	12775717	12776333	True	NM_001099737,NM_001173498,NM_032332,NM_000528,NM_016145,NR_029375	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,-,-,+	WDR83,MAN2B1,WDR83,MAN2B1,C19orf56,WDR83	1284,1308,4183,1308,4182,1284
chr4:8875145-8876014	chr4	+	8875193	8876047	True	NM_018942,NM_001040071	chr4,chr4	-,+	HMX1,LOC650293	-1650,75429
chr19:32837011-32837271	chr19	+	32837051	32837303	True	NM_014910,NM_001136156,NM_032139	chr19,chr19,chr19	+,+,-	ZNF507,ZNF507,ANKRD27	-588,-588,328849
chr22:17564909-17565147	chr22	+	17564920	17565056	True	NM_031890,NM_014339	chr22,chr22	-,+	CECR6,IL17RA	37207,794
chr6:108142285-108142924	chr6	+	108142397	108142871	True	NM_018013,NM_198081	chr6,chr6	+,-	SOBP,SCML4	-331139,2700
chr6:157099225-157099511	chr6	+	157099361	157099495	True	NM_020732,NM_018452,NM_017519	chr6,chr6,chr6	+,-,+	ARID1B,C6orf35,ARID1B	-348,645808,-348
chr19:51856894-51857536	chr19	+	51857395	51857573	True	NM_001014763,NM_001101372	chr19,chr19	-,+	ETFB,IGLON5	573,-42344
chr4:175204819-175205265	chr4	+	175204818	175205244	True	NM_012180,NM_001040157,NM_001145314	chr4,chr4,chr4	-,+,+	FBXO8,KIAA1712,KIAA1712	208,-41,-6
chr21:46114816-46116707	chr21	+	46114950	46116456	True	NM_181686,NM_198699	chr21,chr21	-,+	KRTAP12-1,KRTAP10-12	-12872,630
chrX:153062692-153063028	chrX	+	153062728	153062968	True	NM_001204526,NM_001204527,NM_174869,NR_037927,NM_004135,NM_006280	chrX,chrX,chrX,chrX,chrX,chrX	+,+,-,+,-,+	SSR4,SSR4,IDH3G,SSR4,IDH3G,SSR4	-2875,-3149,-2761,-2875,-2761,-2760
chr18:501650-502046	chr18	+	501669	502072	True	NM_130386,NM_004066	chr18,chr18	-,+	COLEC12,CETN1	-940,78296
chr4:159645862-159646418	chr4	+	159645916	159646310	True	NM_005038,NM_020840	chr4,chr4	-,+	PPID,FNIP2	-1364,43871
chr4:186339120-186340376	chr4	+	186339265	186339903	True	NR_028085,NM_001114357,NM_018359	chr4,chr4,chr4	-,+,-	UFSP2,C4orf47,UFSP2	7286,10641,7286
chr6:131917143-131918470	chr6	+	131917183	131917981	True	NM_015979,NM_000045	chr6,chr6	-,+	MED23,ARG1	31437,-22869
chr8:66730078-66731579	chr8	+	66730601	66731383	True	NM_001145838,NM_002604	chr8,chr8	+,-	MTFR1,PDE7A	-148557,22422
chr5:72685424-72686391	chr5	+	72685754	72686321	True	NM_004472,NM_001037637	chr5,chr5	-,+	FOXD1,BTF3	58082,107928
chr14:105267698-105267912	chr14	+	105267699	105267897	True	NM_005163,NM_001137601,NM_001014431,NM_001014432	chr14,chr14,chr14,chr14	-,+,-,-	AKT1,ZBTB42,AKT1,AKT1	-7761,-817,-5619,-5619
chr3:125607441-125608179	chr3	+	125607712	125607996	True	NM_001015050,NR_024250	chr3,chr3	-,+	ALG1L,LOC100125556	47941,27447
chr19:46388829-46389069	chr19	+	46388871	46389115	True	NM_004497,NM_015649	chr19,chr19	+,-	FOXA3,IRF2BP1	-21404,311
chr7:121946127-121946421	chr7	+	121946170	121946470	True	NM_001160264,NM_001024613,NR_036484	chr7,chr7,chr7	-,-,+	FEZF1,FEZF1,LOC154860	-1605,-1605,-2509
chr1:16070579-16070818	chr1	+	16070657	16070865	True	NM_001089591,NM_001013641,NM_207348	chr1,chr1,chr1	-,+,+	UQCRHL,TMEM82,SLC25A34	63379,-1791,-7899
chr17:74501141-74501825	chr17	+	74501522	74501784	True	NR_033357,NM_024599	chr17,chr17	+,-	PRCD,RHBDF2	21883,-4013
chr19:35085065-35086851	chr19	+	35085097	35086801	True	NM_001025591,NM_001012320	chr19,chr19	-,+	SCGBL,ZNF302	-9,81765
chr4:87760984-87761296	chr4	+	87760984	87761057	True	NM_001166693,NM_197965	chr4,chr4	+,-	AFF1,SLC10A6	95096,9420
chr3:39449148-39450310	chr3	+	39449301	39450041	True	NM_001171174,NR_002325,NM_001012321,NM_002295,NR_002324	chr3,chr3,chr3,chr3,chr3	-,+,+,+,+	CX3CR1,SNORA6,RPSA,RPSA,SNORA62	-126075,-24,-249,-1156,2503
chrX:65382105-65384026	chrX	+	65382207	65384067	True	NM_014799,NM_007268,NM_001130860,NM_138737	chrX,chrX,chrX,chrX	+,-,+,+	HEPH,VSIG4,HEPH,HEPH	41,-122240,11,166
chrX:15509338-15511008	chrX	+	15509661	15511039	True	NR_037859,NM_003662,NM_001018109,NM_203281	chrX,chrX,chrX,chrX	-,-,-,+	PIR-FIGF,PIR,PIR,BMX	-229,722,722,7860
chr22:31534753-31536038	chr22	+	31534988	31536012	True	NM_015715,NM_001002837	chr22,chr22	-,+	PLA2G3,INPP5J	507,-16078
chr1:182643318-182644766	chr1	+	182643368	182644739	True	NM_001102450,NM_033345,NR_036490	chr1,chr1,chr1	-,-,+	RGS8,RGS8,LOC284648	-1301,-1301,-59144
chr5:55148088-55148491	chr5	+	55148326	55148543	True	NM_139017,NM_173514	chr5,chr5	+,-	IL31RA,SLC38A9	-1049,-140163
chr11:64938896-64940042	chr11	+	64939397	64940055	True	NM_001198870,NM_001198869,NM_001198868,NM_001008778,NM_005186,NM_172230	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,-	CAPN1,CAPN1,CAPN1,SPDYC,CAPN1,SYVN1	9248,9094,8630,-1741,9248,-37394
chr11:55748218-55750034	chr11	+	55748462	55750071	True	NM_001001921,NR_027688	chr11,chr11	+,-	OR5AS1,OR7E5P	47823,3861
chr19:3226227-3227028	chr19	+	3226348	3227051	True	NR_033342,NM_198969,NM_021938,NM_001172673	chr19,chr19,chr19,chr19	+,-,+,+	CELF5,AES,CELF5,CELF5	-916,-163384,-1698,-1697
chr10:103536461-103536700	chr10	+	103536496	103536730	True	NM_006993,NM_033164,NM_033165,NM_033163,NR_036114,NM_006119	chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,+,-	NPM3,FGF8,FGF8,FGF8,MIR3158-1,FGF8	6490,-737,-737,-737,-175373,-737
chr16:85060820-85061112	chr16	+	85060887	85061069	True	NM_017740,NM_014732	chr16,chr16	-,+	ZDHHC7,KIAA0513	-15746,340
chr2:33357772-33358928	chr2	+	33357848	33358974	True	NM_001166264,NM_001166265,NM_001166266,NM_000627,NM_015475	chr2,chr2,chr2,chr2,chr2	+,+,+,+,-	LTBP1,LTBP1,LTBP1,LTBP1,FAM98A	689,689,689,689,465438
chr3:98233131-98234847	chr3	+	98233477	98234884	True	NM_001040199,NM_001004737,NM_005290,NM_001040182,NM_001040183,NM_001040181,NM_019895,NM_001040200	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,+,-,-,-,-,-	CLDND1,OR5K2,GPR15,CLDND1,CLDND1,CLDND1,CLDND1,CLDND1	7081,-17010,15993,7081,7081,7081,7081,7081
chr19:36248731-36248947	chr19	+	36248754	36248906	True	NM_019104,NM_001039887,NM_144617	chr19,chr19,chr19	+,+,-	LIN37,C19orf55,HSPB6	-9293,137,-824
chr6:3226075-3227034	chr6	+	3226260	3227024	True	NM_001135750,NM_178012	chr6,chr6	+,-	PSMG4,TUBB2B	32137,994
chr8:99305659-99305902	chr8	+	99305667	99305823	True	NM_024759,NM_020697	chr8,chr8	-,+	NIPAL2,KCNS2	848,133426
chr22:44320686-44321082	chr22	+	44320813	44321141	True	NM_025225,NM_138814	chr22,chr22	+,-	PNPLA3,PNPLA5	-1245,-32920
chr10:93394586-93396407	chr10	+	93394718	93396130	True	NM_025235,NM_005398	chr10,chr10	+,-	TNKS2,PPP1R3C	162020,-1860
chr14:64108274-64108485	chr14	+	64108327	64108483	True	NM_080666,NM_001008726,NM_015180	chr14,chr14,chr14	-,-,+	WDR89,WDR89,SYNE2	158,-202,211199
chr6:26903490-26904763	chr6	+	26904315	26904395	True	NR_003504,NR_026775	chr6,chr6	-,+	GUSBL1,NCRNA00240	19996,20376
chr11:118237773-118238307	chr11	+	118238137	118238228	True	NM_004788,NM_001040651,NM_001204077	chr11,chr11,chr11	+,-,+	UBE4A,CD3D,UBE4A	-7905,-24678,-7905
chr15:30114827-30115030	chr15	+	30114839	30115059	True	NM_003257,NR_026859,NM_175610	chr15,chr15,chr15	-,+,-	TJP1,FAM7A3,TJP1	-133,280875,-133
chr15:49911686-49913003	chr15	+	49911689	49912943	True	NM_152647,NM_020234,NM_001144955	chr15,chr15,chr15	-,+,+	C15orf33,DTWD1,DTWD1	225,282,282
chrX:102584422-102585033	chrX	+	102584523	102584989	True	NM_152278,NM_032621	chrX,chrX	+,-	TCEAL7,BEX2	124,-18549
chr8:10529704-10530051	chr8	+	10529758	10530100	True	NM_001040032,NM_178857	chr8,chr8	+,-	C8orf74,RP1L1	46,-17141
chr17:40702891-40703329	chr17	+	40702941	40703167	True	NM_000413,NM_013290	chr17,chr17	+,-	HSD17B1,PSMC3IP	816,26630
chr17:40702891-40703329	chr17	+	40709167	40709265	False	NM_170607,NM_198204,NM_000413,NM_198205,NM_025233,NM_001042531,NM_001042530,NM_001042532,NM_013290,NM_001042529	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,+,+,+,-,+	MLX,MLX,HSD17B1,MLX,COASY,COASY,COASY,COASY,PSMC3IP,COASY	9812,9812,-5234,9812,4826,4826,4826,4826,20532,4826
chr8:27628178-27629502	chr8	+	27628382	27629501	True	NM_018246,NM_001017420	chr8,chr8	-,+	CCDC25,ESCO2	719,2556
chr8:57360135-57360621	chr8	+	57360206	57360496	True	NM_001135690,NM_024300,NM_006211	chr8,chr8,chr8	-,+,-	PENK,CHCHD7,PENK	-924,-235942,-1613
chr11:60468357-60469301	chr11	+	60468457	60469357	True	NM_004778,NM_031457	chr11,chr11	-,+	GPR44,MS4A8B	154145,-1461
chr1:162051072-162052777	chr1	+	162051108	162052669	True	NM_014697,NM_015441	chr1,chr1	+,-	NOS1AP,OLFML2B	-11584,-57464
chr18:44237283-44237552	chr18	+	44237290	44237540	True	NM_144612,NM_031303	chr18,chr18	-,+	LOXHD1,KATNAL2	-294,289246
chr8:180783-181472	chr8	+	180861	181256	True	NM_001042416,NM_001042415,NR_003572,NM_173539	chr8,chr8,chr8,chr8	+,+,-,+	ZNF596,ZNF596,RPL23AP53,ZNF596	1127,1127,1113,943
chr11:62436551-62436754	chr11	+	62436672	62436739	True	NM_015853,NR_004390,NM_001043229,NM_001085372,NM_024099	chr11,chr11,chr11,chr11,chr11	-,+,+,+,-	UBXN1,SNORA57,METTL12,C11orf83,C11orf48	9845,-3829,-3944,2386,2559
chr22:24234212-24234732	chr22	+	24234275	24234634	True	NM_198440,NM_002415	chr22,chr22	-,+	DERL3,MIF	-53076,1930
chr7:89882998-89883784	chr7	+	89883119	89883807	True	NM_001039706,NM_001160138,NM_152706	chr7,chr7,chr7	+,+,-	C7orf63,C7orf63,C7orf62	-8684,-8684,-1458088
chr3:113556677-113557138	chr3	+	113556852	113557143	True	NM_017577,NM_025146	chr3,chr3	+,-	GRAMD1C,NAA50	537,-91732
chr4:190947865-190948609	chr10	+	135439788	135440489	False	NM_001127386	chr10	+	DUX4L2	39878
chr4:190947865-190948609	chr4	+	190947901	190948602	True	NM_012147,NM_001005217	chr4,chr4	+,-	DUX2,FRG2	40264,57
chr21:42733232-42733994	chr21	+	42733321	42733847	True	NM_002463,NM_001135099	chr21,chr21	+,-	MX2,TMPRSS2	102,146195
chr2:130691031-130691241	chr22	+	16373975	16374029	False	NM_001005239,NR_001591	chr22,chr22	-,+	OR11H1,psiTPTE22	75825,708771
chr2:130691031-130691241	chr2	+	130691040	130691212	True	NR_026740,NM_032144	chr2,chr2	-,+	LOC389033,RAB6C	728,46022
chr2:130691031-130691241	chr14	+	20106357	20106411	False	NM_001197287,NM_172194	chr14,chr14	-,+	OR11H2,OR4Q3	76130,109175
chr2:175198029-175198399	chr2	+	175198133	175198447	True	NM_001145250,NM_004882	chr2,chr2	+,-	SP9,CIR1	1373,62046
chrX:84189509-84190322	chrX	+	84189531	84189993	True	NR_024062,NM_001012980	chrX,chrX	+,-	UBE2DNL,SATL1	-425,174031
chr14:89046461-89047827	chr14	+	89046891	89047592	True	NM_207662,NM_007039	chr14,chr14	+,-	ZC3H14,PTPN21	13137,-25768
chr22:29280555-29281322	chr22	+	29280765	29281335	True	NM_005080,NM_032173	chr22,chr22	-,+	XBP1,ZNRF3	-84205,-927
chr5:176425690-176427050	chr5	+	176425799	176426385	True	NM_001199297,NM_012279,NM_016290,NM_001199298	chr5,chr5,chr5,chr5	-,+,-,-	UIMC1,ZNF346,UIMC1,UIMC1	7455,23311,7118,7470
chr9:112205341-112206008	chr9	+	112205815	112206041	True	NM_001145369,NM_001145370,NM_001037293	chr9,chr9,chr9	-,-,+	PTPN3,PTPN3,PALM2	7673,7673,197026
chr19:41197050-41197298	chr19	+	41197113	41197185	True	NM_025194,NM_004756	chr19,chr19	+,-	ITPKC,NUMBL	25822,-557
chr5:157413590-157413964	chr5	+	157413701	157413961	True	NM_014666,NM_173491	chr5,chr5	-,+	CLINT1,LSM11	-127518,-242997
chr7:123170344-123172210	chr7	+	123171043	123172065	True	NM_080928,NM_178827	chr7,chr7	+,-	ASB15,IQUB	77046,2711
chr7:123170344-123172210	chr2	-	203778188	203778350	False	NM_024744,NM_018256,NM_001104586	chr2,chr2,chr2	+,-,+	ALS2CR8,WDR12,ALS2CR8	-1130,-1239,-1269
chr3:124636892-124638726	chr3	+	124636968	124638438	True	NM_033049,NR_033437	chr3,chr3	-,+	MUC13,UMPS	15207,-187813
chr17:26574871-26575800	chr17	+	26575250	26575840	True	NR_002181,NR_028334	chr17,chr17	+,-	PPY2,FLJ40504	-831,58618
chr2:43825550-43827115	chr2	+	43825589	43826381	True	NM_022065,NM_001083953,NM_172069	chr2,chr2,chr2	-,-,+	THADA,THADA,PLEKHH2	-2404,-2476,38057
chr1:48378625-48379326	chr1	+	48378669	48379264	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	83349,309092
chr17:79518024-79518562	chr17	+	79518104	79518468	True	NR_033338,NM_012418,NM_025161	chr17,chr17,chr17	-,+,-	C17orf70,FSCN2,C17orf70	1011,-22738,1011
chr20:57207174-57207931	chr20	+	57207440	57207817	True	NM_153360,NM_001001433	chr20,chr20	-,+	APCDD1L,STX16	-117491,18491
chr1:165742446-165743826	chr1	+	165742471	165743393	True	NM_019026,NM_012474	chr1,chr1	-,+	TMCO1,UCK2	-4336,53338
chr16:57728171-57728695	chr16	+	57728190	57728743	True	NM_001130099,NM_032269	chr16,chr16	-,+	KIFC3,CCDC135	103236,-31
chr19:44716201-44716460	chr19	+	44716373	44716503	True	NM_004234,NM_182490	chr19,chr19	-,+	ZNF235,ZNF227	92725,187
chr17:53614742-53615750	chr17	+	53615294	53615666	True	NM_021213,NM_012329	chr17,chr17	+,-	PCTP,MMD	212673,-115953
chr3:113141491-113143205	chr3	+	113141558	113142880	True	NM_017699,NM_001164496	chr3,chr3	+,-	SIDT1,WDR52	108337,17532
chr1:167901766-167902564	chr1	+	167902124	167902379	True	NM_001198957,NM_001198956,NM_001143674,NR_026550,NM_018442,NM_001017977,NM_015415	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,-,+,+,-	DCAF6,DCAF6,BRP44,BRP44,DCAF6,DCAF6,BRP44	3417,3417,3991,3123,3417,3417,3991
chr3:126244010-126244588	chr3	+	126244040	126244536	True	NM_144639,NM_001165974,NM_152889	chr3,chr3,chr3	-,-,+	UROC1,UROC1,CHST13	-7424,-7424,-915
chr12:46361152-46362579	chr12	+	46361644	46362434	True	NM_152641,NM_004719	chr12,chr12	+,-	ARID2,SCAF11	-238084,22017
chr5:73936938-73937236	chr5	+	73936946	73937154	True	NM_003633,NM_000521	chr5,chr5	-,+	ENC1,HEXB	145,43814
chr14:70078878-70080825	chr14	+	70079488	70080731	True	NR_024630,NM_014734	chr14,chr14	-,+	C14orf162,KIAA0247	-41570,-1230
chr11:1862533-1862750	chr11	+	1862616	1862792	True	NM_001145829,NR_036185,NM_138567,NM_003282,NM_001145841	chr11,chr11,chr11,chr11,chr11	+,-,+,+,+	TNNI2,MIR4298,SYT8,TNNI2,TNNI2	-1948,18024,-6993,-2434,-1235
chr22:25353926-25354336	chr22	+	25353957	25354206	True	NM_001145206,NM_001001663	chr22,chr22	+,-	KIAA1671,TMEM211	69734,-18643
chr1:12227918-12228817	chr1	+	12227947	12228463	True	NM_001066,NM_138346	chr1,chr1	+,-	TNFRSF1B,KIAA2013	-938,-241462
chr8:124430411-124431632	chr8	+	124430846	124431278	True	NM_018024,NM_014109	chr8,chr8	+,-	WDYHV1,ATAD2	-1932,-22141
chr21:15054181-15054634	chr18	-	14473283	14473534	False	NR_024076,NR_026756	chr18,chr18	-,+	CXADRP3,LOC284233	25410,-136101
chr21:15054181-15054634	chr14	+	19626888	19627140	False	NM_001145442,NR_027480	chr14,chr14	-,+	POTEM,POTEG	393372,-73764
chr21:15054181-15054634	chr14	-	19948253	19948505	False	NM_001145442,NM_172194	chr14,chr14	-,+	POTEM,OR4Q3	72007,267081
chr21:15054181-15054634	chr22	-	16215876	16216128	False	NR_001591,NM_001136213	chr22,chr22	+,-	psiTPTE22,POTEH	866672,72049
chr21:15054181-15054634	chr2	+	132416954	132417190	True	NM_214461,NM_013310	chr2,chr2	-,+	C2orf27B,C2orf27A	142280,62873
chrX:109984851-109985936	chrX	+	109984928	109985932	True	NM_001128166,NM_145234	chrX,chrX	+,-	PAK3,CHRDL1	201580,53194
chr3:193311158-193311379	chr3	+	193311165	193311427	True	NM_032279,NM_015560,NM_130832,NM_130833,NM_130831,NM_130836,NM_130837,NM_130834,NM_130835	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,+,+,+,+,+,+,+	ATP13A4,OPA1,OPA1,OPA1,OPA1,OPA1,OPA1,OPA1,OPA1	-38469,-283,-283,-283,-283,-283,-283,-283,-283
chr12:3187787-3189592	chr12	+	3187869	3189442	True	NM_202003,NM_006675,NM_001168320	chr12,chr12,chr12	-,+,+	FOXM1,TSPAN9,TSPAN9	-201566,-1400,-1400
chr3:119399461-119401271	chr3	+	119399705	119401196	True	NM_033364,NM_005694	chr3,chr3	+,-	C3orf15,COX17	20672,-3462
chr6:33357622-33359096	chr6_qbl_hap6	+	4589848	4591290	False	NM_001350	chr6_qbl_hap6	-	DAXX	-66806
chr6:33357622-33359096	chr6_mcf_hap5	+	4831377	4832819	False	NM_001350,NM_001185181	chr6_mcf_hap5,chr6_mcf_hap5	-,+	DAXX,PFDN6	-66842,-100275
chr6:33357622-33359096	chr6_ssto_hap7	+	4837837	4839279	False	NM_001014433,NM_002263	chr6_ssto_hap7,chr6_ssto_hap7	-,+	CUTA,KIFC1	27082,249
chr6:33357622-33359096	chr6	+	33357621	33359063	True	NM_001014433,NM_002263	chr6,chr6	-,+	CUTA,KIFC1	27052,249
chr16:70102113-70103027	chr16	+	70102599	70102931	True	NR_036265,NR_003610	chr16,chr16	+,-	MIR1972-2,PDXDC2P	-38408,-2748
chr16:70102113-70103027	chr16	-	15065804	15066142	False	NM_015027,NM_173474	chr16,chr16	+,-	PDXDC1,NTAN1	2690,83748
chr19:48825635-48826672	chr19	+	48825745	48826329	True	NM_144577,NM_001425	chr19,chr19	-,+	CCDC114,EMP3	-2413,2299
chr4:6712134-6714052	chr4	+	6712142	6713918	True	NM_203462,NM_018366	chr4,chr4	-,+	MRFAP1L1,CNO	-536,3923
chrX:113817960-113818316	chrX	+	113818031	113818310	True	NM_000868,NM_000640	chrX,chrX	+,-	HTR2C,IL13RA2	240,433948
chr16:23723775-23724469	chr16	+	23723824	23724116	True	NM_005030,NM_033266	chr16,chr16	+,-	PLK1,ERN2	-33674,755
chr12:8811163-8812420	chr12	+	8811308	8812453	True	NM_003480,NM_020734	chr12,chr12	-,+	MFAP5,RIMKLB	3041,38064
chr20:42969136-42970244	chr20	+	42969528	42970212	True	NM_178491,NM_001080472	chr20,chr20	+,-	R3HDML,FITM2	-3953,-29639
chr14:23305237-23305833	chr14	+	23305286	23305872	True	NM_004995,NM_181304,NM_181305,NM_181306,NM_181307,NM_180982,NM_001126106,NM_178336	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,+,+,+,-,+	MMP14,MRPL52,MRPL52,MRPL52,MRPL52,MRPL52,SLC7A7,MRPL52	-80,-6245,-6245,-6245,-6245,-6245,-16272,-6245
chrX:154104687-154105858	chrX	+	154104975	154105688	True	NM_001007524,NM_001007523,NM_012151,NM_080720,NM_019863,NM_001017990	chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,-,+	F8A3,F8A2,F8A1,H2AFB3,F8,H2AFB1	8961,8961,8946,7628,8940,7628
chrX:37937806-37938679	chrX	+	37937908	37938710	True	NM_001163334,NM_001170750	chrX,chrX	+,-	SYTL5,SRPX	-45173,141517
chr16:5008362-5010283	chr16	+	5008923	5010081	True	NM_014692,NM_002705	chr16,chr16	+,-	SEC14L5,PPL	-656,-21787
chr10:27693723-27694357	chr10	+	27693838	27694302	True	NM_021252,NM_001034842	chr10,chr10	+,-	RAB18,PTCHD3	98946,9045
chr3:193276822-193278290	chr3	+	193276846	193278343	True	NM_032279,NM_015560	chr3,chr3	-,+	ATP13A4,OPA1	-4150,32589
chr15:23933558-23934295	chr15	+	23933573	23933865	True	NM_005664,NM_002487	chr15,chr15	+,-	MKRN3,NDN	-123184,-1123
chr11:63607169-63607471	chr11	+	63607178	63607520	True	NM_001039469,NM_001163296,NM_004954,NM_001144936,NM_001163297	chr11,chr11,chr11,chr11,chr11	+,+,+,-,+	MARK2,MARK2,MARK2,C11orf95,MARK2	-829,-829,-829,-71065,-829
chr12:54392280-54392914	chr12	+	54392343	54392882	True	NR_029617,NM_006897,NR_003716	chr12,chr12,chr12	+,+,-	MIR196A2,HOXC9,HOTAIR	-6872,994,-29828
chr3:123704713-123705327	chr3	+	123705044	123705248	True	NR_028136,NM_017578	chr3,chr3	+,-	KALRN,ROPN1	108309,5001
chr5:140789203-140789519	chr5	+	140789213	140789545	True	NM_032090,NM_032101,NM_032100,NM_018921,NM_032089,NM_018927,NM_018926,NM_005642,NM_018913	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,+,-,+	PCDHGA10,PCDHGB7,PCDHGB6,PCDHGA9,PCDHGA9,PCDHGB7,PCDHGB6,TAF7,PCDHGA10	3197,7668,-1494,-6744,-6744,7714,-1494,-88862,3197
chr5:175658962-175660663	chr5	+	175659266	175660531	True	NR_036494,NM_198567	chr5,chr5	-,+	LOC643201,C5orf25	-32968,4838
chr5:175658962-175660663	chr5	-	177104116	177104811	False	NR_026921,NM_007255	chr5,chr5	-,+	LOC202181,B4GALT7	-4838,-77048
chr9:4489160-4489705	chr9	+	4489182	4489522	True	NM_001039395,NM_004170	chr9,chr9	-,+	C9orf68,SLC1A1	177202,904
chr8:121137843-121138212	chr8	+	121137859	121138173	True	NM_024094,NM_021110	chr8,chr8	-,+	DSCC1,COL14A1	-269689,-558
chr11:71816735-71817056	chr11	+	71816772	71817104	True	NM_014042,NR_026886,NM_017907	chr11,chr11,chr11	-,+,-	C11orf51,LRTOMT,LAMTOR1	6768,-25130,-2339
chr12:54124074-54124710	chr12	+	54124274	54124759	True	NR_026554,NM_001143682,NM_020898,NM_017410	chr12,chr12,chr12,chr12	-,-,-,+	CALCOCO1,CALCOCO1,CALCOCO1,HOXC13	-2967,-2967,-2967,207816
chr11:110559880-110560461	chr11	+	110560038	110560455	True	NM_020809,NM_004109	chr11,chr11	-,+	ARHGAP20,FDX1	23053,-259499
chr1:11750304-11750748	chr1	+	11750384	11750657	True	NM_198545,NM_001127325,NM_006341	chr1,chr1,chr1	+,-,-	C1orf187,MAD2L2,MAD2L2	1123,1078,-9113
chr20:55110501-55112442	chr20	+	55110755	55112392	True	NM_001013646,NM_080615	chr20,chr20	+,-	C20orf107,GCNT7	-2511,-9774
chr8:67785976-67787084	chr8	+	67786285	67786832	True	NR_002598,NM_173518,NM_001136160,NM_001136161	chr8,chr8,chr8,chr8	-,+,+,+	SNORD87,C8orf45,C8orf45,C8orf45	48012,-3360,-2607,-3360
chr9:126695019-126696827	chr9	+	126695518	126696641	True	NM_004789,NM_020946,NM_024820	chr9,chr9,chr9	+,-,-	LHX2,DENND1A,DENND1A	77247,-3101,-3101
chr15:75184792-75185108	chr15	+	75184841	75185157	True	NM_002435,NM_020447	chr15,chr15	+,-	MPI,C15orf17	-2482,14355
chr2:85978232-85979017	chr2	+	85978357	85978959	True	NM_198843,NM_032827	chr2,chr2	-,+	SFTPB,ATOH8	-82493,1949
chr5:140772547-140772857	chr5	+	140772560	140772876	True	NM_018925,NM_018921,NM_003736,NM_032099,NM_032098,NM_032088,NM_032089,NM_005642,NM_014004	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,+,-,+	PCDHGB5,PCDHGA9,PCDHGB4,PCDHGB5,PCDHGB4,PCDHGA8,PCDHGA9,TAF7,PCDHGA8	4818,9643,-5159,4818,-5159,-1128,9643,-72209,-1128
chr1:11741714-11742750	chr1	+	11741897	11742507	True	NM_198545,NM_001127325,NM_006341	chr1,chr1,chr1	+,-,-	C1orf187,MAD2L2,MAD2L2	9273,9221,-626
chrX:1402839-1403648	chrY	+	1352877	1353081	False	NM_022148,NR_037461,NM_172247,NM_001161530	chrY,chrY,chrY,chrY	-,+,+,+	CRLF2,MIR3690,CSF2RA,CSF2RA	-71347,9729,-1357,-1357
chrX:1402839-1403648	chrX	+	1402877	1403081	True	NM_022148,NR_037461,NM_172247,NM_001161530	chrX,chrX,chrX,chrX	-,+,+,+	CRLF2,MIR3690,CSF2RA,CSF2RA	-71347,9729,-1357,-1357
chr14:78870080-78871965	chr14	+	78870194	78871943	True	NM_004796,NM_012245	chr14,chr14	+,-	NRXN3,SNW1	-152,-642697
chr20:32034665-32035653	chr20	+	32034683	32035540	True	NM_003098,NM_001032999	chr20,chr20	-,+	SNTA1,CBFA2T2	-2985,42387
chr20:23731409-23732857	chr20	+	23731471	23732630	True	NM_001898,NR_001279	chr20,chr20	-,+	CST1,CSTT	103,-231739
chr10:124029133-124030119	chr10	+	124029212	124029980	True	NM_017615,NM_144587	chr10,chr10	-,+	NSMCE4A,BTBD16	-294469,840
chr17:18429922-18430666	chr17	+	18429943	18430121	True	NR_026809,NR_003554,NM_001040078	chr17,chr17,chr17	-,-,+	FAM106A,LOC220594,LGALS9C	89,-5377,-49895
chr17:18429922-18430666	chr17	-	16692210	16692260	False	NR_026810,NR_029392,NR_003190	chr17,chr17,chr17	+,-,+	FAM106C,KRT16P2,LOC162632	-204,43937,-2055
chr17:18429922-18430666	chr17	-	20320758	20320808	False	NR_023380,NM_001042685	chr17,chr17	+,-	CCDC144C,LGALS9B	-96322,50090
chr5:88178730-88179194	chr5	+	88178762	88179234	True	NM_006467,NM_002397,NM_001193350	chr5,chr5,chr5	+,-,-	POLR3G,MEF2C,MEF2C	1591446,99,99
chr9:98268654-98268863	chr9	+	98268700	98268878	True	NM_001010895,NM_001083607,NM_001083604,NM_001083605,NM_001083606,NM_000264	chr9,chr9,chr9,chr9,chr9,chr9	+,-,-,-,-,-	C9orf102,PTCH1,PTCH1,PTCH1,PTCH1,PTCH1	369021,653,1494,1494,871,2003
chr9:131593995-131595028	chr9	+	131594148	131594902	True	NM_016390,NM_004435	chr9,chr9	-,+	C9orf114,ENDOG	-2063,-13420
chr1:21045930-21047219	chr1	+	21046047	21047075	True	NM_020816,NM_001122819,NM_032409	chr1,chr1,chr1	-,-,+	KIF17,KIF17,PINK1	-1730,-1730,-86150
chr8:95732508-95733333	chr8	+	95732543	95733172	True	NM_181787,NR_034034	chr8,chr8	+,-	DPY19L4,LOC100288748	-491,-80848
chr17:56055454-56057040	chr17	+	56055578	56056686	True	NM_007146,NM_080677	chr17,chr17	-,+	VEZF1,DYNLL2	8981,104093
chr13:51478574-51480136	chr13	+	51478685	51480183	True	NM_001142279,NM_024570,NM_198989	chr13,chr13,chr13	+,+,-	RNASEH2B,RNASEH2B,DLEU7	3630,3630,-60800
chr1:23033678-23034420	chr1	+	23033746	23034303	True	NR_036214,NM_017449,NM_004442	chr1,chr1,chr1	-,+,+	MIR4253,EPHB2,EPHB2	155473,3027,3027
chr10:115932821-115933537	chr10	+	115933092	115933431	True	NR_031747,NM_198795,NM_018017	chr10,chr10,chr10	-,+,-	MIR2110,TDRD1,C10orf118	557,5597,983
chr13:79979826-79980027	chr13	+	79979848	79979942	True	NM_001161407,NM_022118	chr13,chr13	+,-	NDFIP2,RBM26	75316,31
chr1:3606623-3606972	chr1	+	3606667	3606873	True	NM_001126242,NM_001204189,NM_001126240,NM_001126241,NM_001204192,NM_001204191,NM_001204190,NM_017818	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,+,+,-	TP73,TP73,TP73,TP73,TP73,TP73,TP73,WDR8	362,362,362,362,7736,362,362,-39996
chr21:16423408-16424607	chr21	+	16423467	16424562	True	NM_003489,NM_013396	chr21,chr21	-,+	NRIP1,USP25	12614,677933
chr8:120844321-120844830	chr8	+	120844452	120844817	True	NM_003184,NM_022783	chr8,chr8	-,+	TAF2,DEPTOR	307,41082
chr1:238028341-238028905	chr1	+	238028392	238028744	True	NR_027247,NM_021186	chr1,chr1	+,-	LOC100130331,ZP4	-2968,25528
chr12:45270310-45270528	chr12	+	45270317	45270387	True	NM_001145108,NM_001145109,NM_001025356,NM_006159,NM_001145107	chr12,chr12,chr12,chr12,chr12	-,-,+,-,-	NELL2,NELL2,ANO6,NELL2,NELL2	-70,-873,339382,-70,296
chrX:48215414-48216251	chrX	+	48215899	48216189	True	NM_175711,NM_021014,NM_001034832	chrX,chrX,chrX	-,-,+	SSX3,SSX3,SSX4B	3,3,26778
chr12:6740730-6741228	chr12	+	6740738	6740970	True	NM_001164094,NM_001142961,NM_020400	chr12,chr12,chr12	+,-,-	COPS7A,LPAR5,LPAR5	92179,-17,4377
chr3:195765463-195766002	chr3	+	195765865	195766026	True	NM_003234,NR_034088	chr3,chr3	-,+	TFRC,LOC401109	42986,103480
chr6:36952929-36953869	chr6	+	36952949	36953707	True	NM_014341,NM_173558	chr6,chr6	-,+	MTCH1,FGD2	292,19715
chr11:2158893-2159106	chr11	+	2158942	2159084	True	NR_030158,NR_028044,NR_028043,NM_000612,NM_001127598	chr11,chr11,chr11,chr11,chr11	-,+,+,-,-	MIR483,IGF2AS,IGF2AS,IGF2,IGF2	-3503,2673,2673,1170,3307
chr11:34962290-34963410	chr11	+	34962581	34963398	True	NM_015957,NM_003477	chr11,chr11	-,+	APIP,PDHX	-24642,-24963
chr20:34120138-34121081	chr20	+	34120238	34120994	True	NM_198398,NM_015966,NR_026933,NM_001145350	chr20,chr20,chr20,chr20	+,+,-,-	ERGIC3,ERGIC3,C20orf173,C20orf173	8783,8783,-2757,-2757
chrX:106044990-106046062	chrX	+	106045059	106045856	True	NM_198881,NM_017752,NM_001171706	chrX,chrX,chrX	+,+,-	TBC1D8B,TBC1D8B,RIPPLY1	62,62,100755
chr7:74284402-74284758	chr7	+	74284414	74284621	True	NM_173537,NR_027775	chr7,chr7	-,+	GTF2IRD2,PMS2P5	-16573,22272
chr7:74284402-74284758	chr7	-	74491609	74491816	False	NM_030798,NM_001003795	chr7,chr7	-,+	WBSCR16,GTF2IRD2B	-1910,16530
chr19:41219644-41220188	chr19	+	41219804	41219955	True	NM_025194,NM_001142555,NM_024876	chr19,chr19,chr19	+,-,-	ITPKC,ADCK4,ADCK4	3052,1107,2886
chr1:46269817-46270843	chr1	+	46270026	46270558	True	NM_005897,NM_015112	chr1,chr1	-,+	IPP,MAST2	-53541,-792
chr1:46766891-46767172	chr1	+	46766896	46767218	True	NM_006369,NM_006004	chr1,chr1	-,+	LRRC41,UQCRH	1870,2161
chr5:138084887-138085790	chr5	+	138084930	138085679	True	NM_015564,NM_001903	chr5,chr5	-,+	LRRTM2,CTNNA1	125438,3427
chr4:187646444-187647046	chr4	+	187646445	187647068	True	NM_000128,NM_005245	chr4,chr4	+,-	F11,FAT1	-459378,-1458
chr10:101546847-101548525	chr10	+	101547267	101548551	True	NM_000392,NM_078470	chr10,chr10	+,-	ABCC2,COX15	-4862,-54844
chr15:75200493-75202035	chr15	+	75200695	75202087	True	NM_002435,NM_020447	chr15,chr15	+,-	MPI,C15orf17	-18336,-1233
chr2:60917972-60918944	chr2	+	60918167	60918807	True	NM_022893,NM_022894	chr2,chr2	-,+	BCL11A,PAPOLG	-137534,64557
chr22:39415426-39416094	chr22	+	39415550	39416138	True	NM_152426,NM_175709,NM_014508	chr22,chr22,chr22	+,-,+	APOBEC3D,CBX7,APOBEC3C	979,132450,-5339
chr17:28657207-28657931	chr17	+	28657206	28657940	True	NM_206832,NM_001304	chr17,chr17	-,+	TMIGD1,CPD	3178,48001
chr19:42571337-42571649	chr19	+	42571364	42571640	True	NM_022752,NM_002088	chr19,chr19	+,-	ZNF574,GRIK5	8649,-1407
chr7:76104550-76104926	chr7	+	76104675	76104736	True	NR_003262,NM_001102596	chr7,chr7	-,+	FDPSL2A,DTX2	-358,5090
chr7:76104550-76104926	chr7	+	76602775	76602836	False	NR_023383,NM_006682	chr7,chr7	+,-	PMS2P11,FGL2	7302,226365
chrX:129273229-129273689	chrX	+	129273336	129273691	True	NM_001130846,NM_004794	chrX,chrX	-,+	AIFM1,RAB33A	-1321,32081
chr9:112173776-112174744	chr9	+	112173901	112174401	True	NR_026918,NM_001037293	chr9,chr9	-,+	PTPN3,PALM2	5712,228666
chr3:46539011-46540115	chr3	+	46539144	46539865	True	NM_002343,NM_031440	chr3,chr3	-,+	LTF,RTP3	-32546,96
chr3:124773459-124774074	chr3	+	124773493	124774051	True	NM_020733,NR_033437	chr3,chr3	-,+	HEG1,UMPS	801,-324331
chr7:28341178-28341438	chr7	+	28341252	28341434	True	NM_182899,NM_175061	chr7,chr7	+,-	CREB5,JAZF1	-2364,-120815
chr9:37755123-37756090	chr9	+	37755341	37756020	True	NM_016042,NM_144964	chr9,chr9	-,+	EXOSC3,RG9MTD3	29095,-1590
chr11:76780591-76781368	chr11	+	76780595	76781211	True	NM_182833,NM_004055	chr11,chr11	-,+	GDPD4,CAPN5	217302,-2654
chrX:49088322-49089353	chrX	+	49088510	49089357	True	NM_005183,NM_014008	chrX,chrX	-,+	CACNA1F,CCDC22	526,2569
chr9:136324254-136324508	chr9	+	136324286	136324518	True	NM_017586,NM_001145099,NM_001135775	chr9,chr9,chr9	+,-,+	C9orf7,SLC2A6,C9orf7	568,19808,568
chr17:40714787-40715021	chr17	+	40714809	40715063	True	NM_170607,NM_198204,NM_198205,NM_025233,NM_001042531,NM_001042530,NM_001042532,NM_013290,NM_001042529	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,+,+,-,+	MLX,MLX,MLX,COASY,COASY,COASY,COASY,PSMC3IP,COASY	4014,4014,4014,-768,-768,-768,-768,14734,-768
chr2:241378014-241378310	chr2	+	241378028	241378196	True	NR_024014,NM_002081	chr2,chr2	-,+	PP14571,GPC1	17971,-2964
chr5:179720037-179720283	chr5	+	179720195	179720259	True	NM_001135044,NM_139068,NM_139069,NM_015455,NM_139070,NM_002752	chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,+,-,-	MAPK9,MAPK9,MAPK9,CNOT6,MAPK9,MAPK9	-1124,-1124,-1124,201157,-1124,-1124
chr4:11429671-11430002	chr4	+	11429725	11429983	True	NR_030298,NM_005114	chr4,chr4	+,-	MIR572,HS3ST1	-59329,604
chr11:66384374-66384597	chr11	+	66384386	66384532	True	NM_018219,NM_001198845,NM_006328,NM_001198846,NM_001198836,NM_001198837	chr11,chr11,chr11,chr11,chr11,chr11	-,+,+,+,+,+	CCDC87,RBM14-RBM4,RBM14,RBM14-RBM4,RBM14,RBM14	-23832,-384,-384,-384,-384,-384
chr1:207679359-207680610	chr1	+	207679388	207680544	True	NR_029832,NM_000651,NM_000573	chr1,chr1,chr1	-,+,+	MIR29C,CR1,CR1	294797,-9966,-9966
chr14:23397743-23398385	chr14	+	23397752	23398276	True	NM_006109,NM_173527,NM_001077351,NM_001077352,NM_018107,NM_001039619	chr14,chr14,chr14,chr14,chr14,chr14	-,+,-,-,-,-	PRMT5,REM2,RBM23,RBM23,RBM23,PRMT5	435,-45371,-9356,-9356,-9356,435
chr2:10862344-10863887	chr2	+	10862468	10863676	True	NM_001039362,NM_144583,NM_024894	chr2,chr2,chr2	+,+,-	ATP6V1C2,ATP6V1C2,NOL10	-744,-744,-32356
chr1:202973556-202974031	chr1	+	202973781	202973880	True	NR_036557,NM_138391,NM_001079809	chr1,chr1,chr1	-,+,+	LOC401980,TMEM183A,TMEM183B	2574,2653,2655
chr2:96013244-96013633	chr2	+	96013334	96013664	True	NM_001164464,NM_001034914	chr2,chr2	-,+	TRIM43B,KCNIP3	136865,-617
chr15:65813041-65813455	chr15	+	65813275	65813462	True	NM_130434,NM_017743,NM_197961,NM_197960,NM_016395	chr15,chr15,chr15,chr15,chr15	-,-,-,-,+	DPP8,DPP8,DPP8,DPP8,PTPLAD1	-3240,-3240,-3240,-3666,9364
chr7:145824041-145824680	chr7	+	145824164	145824692	True	NR_031645,NM_014141	chr7,chr7	-,+	MIR548F4,CNTNAP2	1250575,-10763
chr14:77934538-77935697	chr14	+	77934541	77935592	True	NM_022067,NM_012111	chr14,chr14	-,+	VIPAR,AHSA1	-10558,-10219
chr2:74153211-74154186	chr2	+	74153280	74154203	True	NM_080918,NM_003584,NM_080916	chr2,chr2,chr2	+,-,+	DGUOK,DUSP11,DGUOK	-23,-145996,-23
chr15:75104101-75105142	chr15	+	75104578	75105084	True	NM_021819,NM_001099436	chr15,chr15	+,-	LMAN1L,ULK3	109,30518
chr1:160053906-160055288	chr1	+	160053920	160055297	True	NM_052868,NM_002241,NM_004983	chr1,chr1,chr1	-,-,+	IGSF8,KCNJ10,KCNJ9	13162,-13869,-2611
chr10:129843747-129844566	chr10	+	129844301	129844509	True	NM_130435,NM_001145966	chr10,chr10	+,-	PTPRE,MKI67	1303,80009
chr11:840612-841148	chr11	+	840617	841065	True	NM_003271,NM_001039490,NM_021128,NM_139030,NM_001025239,NM_001025238,NM_004357,NM_139029,NM_001025235,NM_001025234,NM_001025237,NM_001025236	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,-,+,+,+,+,+,+,+,+,+	TSPAN4,CD151,POLR2L,CD151,TSPAN4,TSPAN4,CD151,CD151,TSPAN4,TSPAN4,TSPAN4,TSPAN4	1758,-7716,1514,-7716,1758,1758,-7716,-7716,1875,3015,3380,1875
chr4:88927418-88928156	chr4	+	88927659	88928137	True	NM_000297,NM_004827	chr4,chr4	+,-	PKD2,ABCG2	661,151924
chr5:78530169-78530729	chr5	+	78530411	78530536	True	NM_013391,NM_152405	chr5,chr5	-,+	DMGDH,JMY	-164962,1388
chr6:46626565-46627715	chr6	+	46626578	46627696	True	NM_016593,NM_004277,NM_001204052,NM_001204051	chr6,chr6,chr6,chr6	-,+,+,+	CYP39A1,SLC25A27,SLC25A27,SLC25A27	-6055,-5985,-5985,-5985
chr2:190044056-190045849	chr2	+	190044065	190045656	True	NM_000393,NR_037401	chr2,chr2	-,+	COL5A2,MIR3606	22,-183760
chr13:19683826-19685824	chr13	+	19683951	19685557	True	NR_002801,NR_026852	chr13,chr13	-,+	PHF2P1,LOC348021	6923,-101610
chr4:120058676-120060039	chr4	+	120058808	120060012	True	NM_016599,NM_001001701	chr4,chr4	+,-	MYOZ2,C4orf3	-1931,162014
chrX:90689624-90689844	chrX	+	90689661	90689877	True	NM_080832,NM_004538	chrX,chrX	+,-	PABPC5,NAP1L3	-115,2238855
chr2:11051184-11051477	chr2	+	11051191	11051517	True	NM_005742,NM_002236	chr2,chr2	-,+	PDIA6,KCNF1	-98231,545
chr14:34931898-34932547	chr14	+	34931940	34932569	True	NR_002937,NM_138288	chr14,chr14	+,-	C14orf19,C14orf147	476558,-472
chr19:50980379-50982229	chr19	+	50980700	50981924	True	NM_206538,NM_138411,NM_175063	chr19,chr19,chr19	+,-,+	C19orf63,FAM71E1,C19orf63	-1018,-697,-1018
chr17:27227022-27228062	chr17	+	27227428	27228092	True	NM_144683,NM_005702,NM_004475	chr17,chr17,chr17	-,+,-	DHRS13,ERAL1,FLOT2	2047,-45444,-2713
chr17:17743974-17744576	chr17	+	17744010	17744614	True	NM_001005291,NM_004176,NM_001130091	chr17,chr17,chr17	-,-,+	SREBF1,SREBF1,LRRC48	-3685,-3685,131512
chr2:71354915-71355750	chr2	+	71355047	71355561	True	NM_005791,NM_032601	chr2,chr2	+,-	MPHOSPH10,MCEE	1882,1891
chr10:127560522-127561458	chr10	+	127560725	127561473	True	NM_018180,NM_145235	chr10,chr10	-,+	DHX32,FANK1	8461,23634
chr12:94940449-94940687	chr12	+	94940483	94940729	True	NM_016122,NR_027035	chr12,chr12	-,+	CCDC41,LOC144486	-86719,-86766
chr5:125998751-125999323	chr5	+	125998976	125999310	True	NM_001202404,NM_207408	chr5,chr5	-,+	ALDH7A1,C5orf48	-67894,-31613
chr7:23035834-23036620	chr7	+	23036153	23036633	True	NM_001172428,NM_032581	chr7,chr7	+,-	KLHL7,FAM126A	108719,17195
chr14:50064999-50065203	chr14	+	50065006	50065134	True	NM_203467,NR_037792,NR_037793,NM_001030001,NM_152329	chr14,chr14,chr14,chr14,chr14	+,+,+,-,+	LRR1,LRR1,LRR1,RPS29,LRR1	280,280,280,-11912,280
chr6:33550694-33551592	chr6	+	33551021	33551551	True	NR_027908,NR_028361,NM_001188	chr6,chr6,chr6	-,+,-	C6orf227,GGNBP1,BAK1	9614,38,-2951
chr22:31063370-31063620	chr22	+	31063500	31063638	True	NM_152511,NM_030758	chr22,chr22	-,+	DUSP18,OSBP2	284,27154
chr5:139783155-139783435	chr5	+	139783266	139783469	True	NM_024668,NM_017747,NM_020690,NM_017978,NM_001945,NM_001197030	chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,-,+	ANKHD1,ANKHD1,ANKHD1-EIF4EBP3,ANKHD1,HBEGF,ANKHD1	-1919,-1919,-1919,-1919,-57078,-1919
chr8:22526887-22527821	chr8	+	22527030	22527690	True	NM_018688,NM_021174	chr8,chr8	-,+	BIN3,KIAA1967	-369,-64542
chr3:32729034-32730417	chr3	+	32729237	32729697	True	NM_016141,NM_015442	chr3,chr3	-,+	DYNC1LI1,CNOT10	-116871,-2591
chr1:167191314-167192122	chr1	+	167191395	167191986	True	NR_037163,NM_001198786,NM_002697,NM_005814	chr1,chr1,chr1,chr1	+,+,+,-	POU2F1,POU2F1,POU2F1,GPA33	-1323,-1380,-1380,-131527
chr19:677006-677780	chr19	+	677056	677745	True	NM_005860,NM_194460	chr19,chr19	+,-	FSTL3,RNF126	-718,-13823
chr22:24891291-24891635	chr22	+	24891324	24891630	True	NR_028483,NR_028484,NM_016327	chr22,chr22,chr22	-,-,+	C22orf45,C22orf45,UPB1	-541,-541,-124
chr1:32712754-32713402	chr1	+	32712762	32713288	True	NM_032648,NR_026850,NM_005356	chr1,chr1,chr1	+,-,+	FAM167B,MTMR9LP,LCK	5,-5451,3551
chr19:45394932-45395184	chr19	+	45395022	45395164	True	NM_145288,NM_006114,NM_001128916,NM_001128917	chr19,chr19,chr19,chr19	-,+,+,+	ZNF296,TOMM40,TOMM40,TOMM40	184574,-596,-596,-596
chr17:7286036-7286286	chr17	+	7286056	7286326	True	NM_003985,NM_001201576	chr17,chr17	+,-	TNK1,PLSCR3	-1742,11886
chr7:50339606-50341208	chr7	+	50339605	50341216	True	NM_001042762,NM_006060	chr7,chr7	-,+	FIGNL1,IKZF1	176922,3161
chr4:170931896-170932814	chr4	+	170932386	170932777	True	NM_001009554,NM_173872	chr4,chr4	-,+	MFAP3L,CLCN3	-7451,-390723
chr16:4667544-4667839	chr16	+	4667815	4667885	True	NM_001142289,NM_001142291,NM_001142290,NM_145253,NM_015246	chr16,chr16,chr16,chr16,chr16	+,+,+,-,+	MGRN1,MGRN1,MGRN1,FAM100A,MGRN1	6940,6940,6940,-2888,6940
chr14:105330013-105330228	chr14	+	105330063	105330270	True	NM_015005,NM_001112726,NM_001014432	chr14,chr14,chr14	+,+,-	KIAA0284,KIAA0284,AKT1	1379,1379,-67983
chr20:32582389-32583345	chr20	+	32582619	32583379	True	NM_016732,NM_007367,NM_003908	chr20,chr20,chr20	+,+,-	RALY,RALY,EIF2S2	-941,-941,116756
chr15:74467985-74468238	chr15	+	74467990	74468254	True	NM_001199042,NM_201526,NM_005545	chr15,chr15,chr15	-,+,+	STRA6,ISLR,ISLR	27016,-1136,-1954
chr11:57806754-57808269	chr11	+	57806894	57808293	True	NM_001005211,NM_001005186	chr11,chr11	-,+	OR9I1,OR6Q1	78673,-8527
chr4:818098-818370	chr4	+	818271	818343	True	NM_032326,NM_006651	chr4,chr4	+,-	TMEM175,CPLX1	107918,1652
chr3:9975803-9976268	chr3	+	9975891	9976049	True	NM_001031717,NM_207351,NM_015513,NM_001077415	chr3,chr3,chr3,chr3	+,-,+,+	CRELD1,PRRT3,CRELD1,CRELD1	-418,18079,-419,-418
chr21:45877558-45878234	chr21	+	45877734	45877905	True	NM_198691,NM_030891	chr21,chr21	-,+	KRTAP10-1,LRRC3	82224,-2393
chr2:73438886-73439881	chr2	+	73438968	73439760	True	NM_006062,NM_032319,NM_001134462	chr2,chr2,chr2	+,-,+	SMYD5,C2orf7,NOTO	1605,20646,-9640
chr1:167872521-167873416	chr1	+	167872886	167873259	True	NM_001017977,NM_001167749	chr1,chr1	+,-	DCAF6,ADCY10	32537,10245
chr7:140858054-140858277	chr7	+	140858196	140858294	True	NM_053035,NM_001195278	chr7,chr7	-,+	MRPS33,LOC100131199	-143415,-84215
chrX:111326915-111327218	chrX	+	111326914	111327264	True	NM_012471,NM_001004308	chrX,chrX	-,+	TRPC5,ZCCHC16	-910,-712
chr12:31811915-31812153	chr12	+	31811990	31812114	True	NM_144973,NM_173802,NM_001135863	chr12,chr12,chr12	-,+,+	DENND5B,METTL20,METTL20	-68038,6,494
chr1:115259438-115259968	chr1	+	115259500	115259898	True	NM_003176,NM_002524	chr1,chr1	+,-	SYCP1,NRAS	137556,15
chr7:128552049-128552820	chr7	+	128552179	128552810	True	NM_199349,NM_001098629,NM_001135914	chr7,chr7,chr7	-,+,-	KCP,IRF5,KCP	-1406,25183,-1406
chr1:86887362-86888077	chr1	+	86887373	86887941	True	NM_006536,NM_020729	chr1,chr1	+,-	CLCA2,ODF2L	1827,-25348
chr3:185266841-185268693	chr3	+	185266964	185268357	True	NM_021627,NM_139248	chr3,chr3	+,-	SENP2,LIPH	35673,2066
chr1:180471959-180472237	chr1	+	180471972	180472236	True	NM_001135669,NM_032360	chr1,chr1	+,-	XPR1,ACBD6	128909,32
chr14:88780013-88781138	chr14	+	88780034	88781158	True	NM_001040428,NM_138317	chr14,chr14	+,-	SPATA7,KCNK10	70829,8485
chr5:178157807-178158376	chr5	+	178157894	178158422	True	NM_005649,NM_058230	chr5,chr5	-,+	ZNF354A,ZNF354B	-191,128531
chr11:116701306-116701830	chr11	+	116701518	116701812	True	NM_000039,NM_000482,NM_000040	chr11,chr11,chr11	-,-,+	APOA1,APOA4,APOC3	6576,-7507,-945
chr8:22411319-22411589	chr8	+	22411331	22411535	True	NR_027715,NM_005775	chr8,chr8	-,+	FLJ14107,SORBS3	88237,-2131
chr12:103310217-103310917	chr12	+	103310235	103310772	True	NM_000277,NM_004316	chr12,chr12	-,+	PAH,ASCL1	662,40679
chr8:120427654-120428514	chr8	+	120427661	120428435	True	NM_002514,NM_001040092	chr8,chr8	+,-	NOV,ENPP2	116,222721
chr19:12992769-12992985	chr19	+	12992850	12992951	True	NM_006563,NM_001375,NM_000159,NM_013976	chr19,chr19,chr19,chr19	-,-,+,+	KLF1,DNASE2,GCDH,GCDH	5119,-515,9022,9022
chr16:56760523-56762390	chr16	+	56760933	56762429	True	NM_005950,NM_014669	chr16,chr16	-,+	MT1G,NUP93	-58956,1587
chr14:20811352-20811825	chr14	+	20811556	20811810	True	NM_001042618,NM_005484,NR_002312	chr14,chr14,chr14	+,+,-	PARP2,PARP2,RPPH1	-26,-26,14
chr22:25394406-25395007	chr22	+	25394743	25395051	True	NM_001001663,NM_001145206	chr22,chr22	-,+	TMEM211,KIAA1671	-59429,28889
chr4:118950148-118951274	chr4	+	118950289	118951092	True	NM_004784,NM_003619	chr4,chr4	+,-	NDST3,PRSS12	4407,322883
chrX:103317354-103317762	chrX	+	103317382	103317751	True	NR_003238,NM_001164416	chrX,chrX	-,+	H2BFXP,H2BFM	30,-22917
chrX:103317354-103317762	chrX	-	103230252	103230621	False	NR_003238,NM_001002916	chrX,chrX	+,-	H2BFXP,H2BFWT	-30,37685
chr11:59243943-59245447	chr11	+	59244074	59245480	True	NM_001004705,NM_001001954	chr11,chr11	+,-	OR4D10,OR5A2	77,-53648
chr14:45605046-45605300	chr14	+	45605050	45605322	True	NM_002013,NM_020937	chr14,chr14	-,+	FKBP3,FANCM	-1318,-7
chr20:37070735-37071727	chr20	+	37070757	37071733	True	NR_002986,NR_002972,NR_015366,NR_027241,NR_003239,NR_003018	chr20,chr20,chr20,chr20,chr20,chr20	+,+,-,-,+,-	SNORA60,SNORA39,LOC388796,LOC388796,SNHG11,SNORA71D	6278,4992,-6795,-6739,3563,-8115
chr1:85667574-85668248	chr1	+	85667573	85668281	True	NM_145172,NM_032184	chr1,chr1	+,-	WDR63,SYDE2	-139631,-845
chr16:2829262-2829624	chr16	+	2829347	2829605	True	NM_152891,NM_001135086,NM_007108,NM_207013	chr16,chr16,chr16,chr16	-,+,-,-	PRSS33,PRSS41,TCEB2,TCEB2	7153,18880,-2050,-2050
chr4:183739252-183740079	chr4	+	183739311	183740128	True	NR_003612,NM_001012732	chr4,chr4	+,-	FAM92A3,DCTD	218689,98552
chr10:135089282-135089521	chr10	+	135089311	135089569	True	NM_001164490,NM_001109,NM_145806,NM_001164489	chr10,chr10,chr10,chr10	-,-,+,-	ADAM8,ADAM8,ZNF511,ADAM8	888,888,32853,888
chr17:45254662-45256259	chr17	+	45254998	45256163	True	NM_001114091,NM_001002841	chr17,chr17	-,+	CDC27,MYL4	10565,30264
chr15:52472626-52473368	chr15	+	52472664	52473416	True	NM_006578,NM_002748	chr15,chr15	-,+	GNB5,MAPK6	-502,-161304
chr2:130988188-130988414	chr2	+	130988211	130988413	True	NM_025029,NM_207312	chr2,chr2	+,-	MZT2B,TUBA3E	-48761,-32177
chr2:130988188-130988414	chr2	-	132200991	132201041	False	NR_002826,NM_080386	chr2,chr2	-,+	LOC401010,TUBA3D	1476,32624
chr12:9826062-9827835	chr12	+	9826126	9827654	True	NM_001197317,NM_172004,NM_001197318,NM_001197319,NM_013269,NR_036693,NM_001004419	chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,-,+,+,+,+,+	CLEC2D,CLECL1,CLEC2D,CLEC2D,CLEC2D,CLEC2D,CLEC2D	-3846,58266,-3869,-3846,-3869,-3869,-3868
chr22:22086280-22086993	chr22	+	22086391	22086797	True	NM_013313,NM_148176	chr22,chr22	-,+	YPEL1,PPIL2	3324,-66169
chr1:24523583-24524313	chr1	+	24523612	24524341	True	NM_170743,NM_173064,NM_173065,NR_027087	chr1,chr1,chr1,chr1	-,-,-,+	IL28RA,IL28RA,IL28RA,LOC284632	-9847,-9847,-9847,2388
chr8:22783060-22783647	chr8	+	22783115	22783489	True	NM_144962,NM_001160036	chr8,chr8	-,+	PEBP4,RHOBTB2	1986,61440
chr3:194117775-194118164	chr3	+	194117787	194118213	True	NR_033929,NM_004488	chr3,chr3	+,-	FLJ34208,GP5	89655,1832
chr17:34808280-34809170	chr17	+	34808878	34809143	True	NM_001001418,NM_004773,NM_001040282	chr17,chr17,chr17	-,+,-	TBC1D3C,ZNHIT3,TBC1D3G	-787,33329,-775
chr17:34808280-34809170	chr17	-	36282919	36283184	False	NM_032258,NR_024178,NM_001123391	chr17,chr17,chr17	+,-,+	TBC1D3F,LOC284100,TBC1D3	775,-38556,775
chr17:34808280-34809170	chr17	+	34758017	34758073	False	NM_001123392,NM_004773	chr17,chr17	-,+	TBC1D3H,ZNHIT3	-967,84399
chr17:34808280-34809170	chr17	+	34593002	34593079	False	NM_001001435,NM_001001418	chr17,chr17	+,-	CCL4L1,TBC1D3C	46954,-975
chr17:34808280-34809170	chr17	+	34504770	34505035	False	NM_001001417,NM_001001435	chr17,chr17	-,+	TBC1D3B,CCL4L1	-782,33432
chr17:36496655-36498022	chr17	+	36496889	36497621	True	NM_001004334,NM_014598	chr17,chr17	-,+	GPR179,SOCS7	2122,10385
chr5:139027002-139027273	chr5	+	139027030	139027270	True	NM_016463,NM_198282	chr5,chr5	+,-	CXXC5,TMEM173	1030,-164687
chr11:94301529-94302837	chr11	+	94301541	94302203	True	NM_005591,NM_152431	chr11,chr11	-,+	MRE11A,PIWIL4	-74501,-1118
chr20:44239502-44240456	chr20	+	44239539	44240476	True	NM_147198,NM_080753	chr20,chr20	-,+	WFDC9,WFDC10A	19482,17908
chr12:57999051-57999684	chr12	+	57999171	57999719	True	NM_001111270,NM_182947,NM_178502,NM_001478	chr12,chr12,chr12,chr12	+,+,+,-	ARHGEF25,ARHGEF25,DTX3,B4GALNT1	4243,5498,-618,27316
chr14:73361926-73363603	chr14	+	73361976	73363166	True	NM_012074,NM_001163508	chr14,chr14	-,+	DPF3,DCAF4	-1167,29873
chr2:220120248-220120927	chr2	+	220120457	220120874	True	NM_006000,NR_003063	chr2,chr2	-,+	TUBA4A,TUBA4B	-1819,-2544
chr7:28318304-28319362	chr7	+	28318518	28319405	True	NM_182899,NM_175061	chr7,chr7	+,-	CREB5,JAZF1	19534,-98081
chr19:47736786-47737235	chr19	+	47736978	47737284	True	NM_001127241,NM_001127240,NM_001127242,NR_036159,NR_036158,NM_014417	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,+,-	BBC3,BBC3,BBC3,MIR3191,MIR3190,BBC3	-955,-955,-955,-6702,-6830,-2527
chr3:100964714-100966161	chr3	+	100964800	100966170	True	NM_016247,NR_036433	chr3,chr3	-,+	IMPG2,FAM172B	73299,271545
chr4:32040708-32040982	chr4	+	32040756	32040909	True	NM_015230,NM_032457	chr4,chr4	-,+	ARAP2,PCDH7	4205123,-1318776
chr1:32739167-32739750	chr1	+	32739189	32739763	True	NM_001042771,NR_026850	chr1,chr1	+,-	LCK,MTMR9LP	36,-31878
chr5:148442738-148444539	chr5	+	148442874	148444416	True	NM_024577,NM_014945	chr5,chr5	-,+	SH3TC2,ABLIM3	-137,76637
chrX:135961603-135962117	chrX	+	135961602	135962044	True	NM_001164803,NR_002735,NM_002139,NM_000074,NR_028477,NR_028476	chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,+,-,-	RBMX,SNORD61,RBMX,CD40LG,RBMX,RBMX	945,-172,945,-231319,945,945
chr14:36984046-36984247	chr14	+	36984045	36984290	True	NM_003317,NM_006194,NM_001101341,NM_001079668	chr14,chr14,chr14,chr14	-,+,-,-	NKX2-1,PAX9,SFTA3,NKX2-1	4663,142482,-1055,5190
chr1:36622905-36623782	chr1	+	36623037	36623831	True	NM_014408,NM_018067	chr1,chr1	-,+	TRAPPC3,MAP7D1	-7970,-1285
chr3:169670298-169670887	chr3	+	169670335	169670574	True	NM_003262,NR_027622	chr3,chr3	+,-	SEC62,LOC100128164	14005,13999
chr16:31146930-31147243	chr16	+	31146976	31147184	True	NM_002773,NM_182958	chr16,chr16	-,+	PRSS8,MYST1	17,-18042
chr10:124318495-124318803	chr10	+	124318495	124318843	True	NM_017579,NM_001010912,NM_004406,NM_007329	chr10,chr10,chr10,chr10	+,-,+,+	DMBT1,C10orf120,DMBT1,DMBT1	1337,140545,1337,1337
chr17:57186395-57186900	chr17	+	57186684	57186829	True	NM_001005207,NM_015294,NM_018304	chr17,chr17,chr17	-,-,+	TRIM37,TRIM37,PRR11	-2418,-2418,46030
chr17:27347648-27348505	chr17	+	27347661	27348539	True	NM_178860,NM_016518	chr17,chr17	-,+	SEZ6,PIPOX	-14580,21378
chr10:75672751-75673059	chr10	+	75672779	75673105	True	NM_002658,NM_001001791,NM_001145031	chr10,chr10,chr10	+,-,+	PLAU,C10orf55,PLAU	-1968,9480,-1968
chrY:10033863-10034073	chrY	+	10033867	10034095	True	NR_003593,NR_003589	chrY,chrY	+,-	TTTY23B,TTTY1B	-285511,-421939
chr6:26160476-26161019	chr6	+	26160475	26160820	True	NM_138720,NM_003539,NM_005321,NM_021063	chr6,chr6,chr6,chr6	+,-,+,+	HIST1H2BD,HIST1H4D,HIST1H1E,HIST1H2BD	-2183,28542,-3973,-2183
chr1:3566816-3567344	chr1	+	3566894	3567300	True	NM_001204188,NM_001204184,NM_001204185,NM_001204186,NM_001204187,NM_005427,NM_017818	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,+,-	TP73,TP73,TP73,TP73,TP73,TP73,WDR8	1828,1828,1828,1828,1828,1828,-223
chr3:53107237-53107665	chr3	+	53107278	53107693	True	NM_016329,NM_006254	chr3,chr3	-,+	SFMBT1,PRKCD	-27189,87529
chr15:26106237-26106858	chr15	+	26106307	26106852	True	NM_024490,NR_001295	chr15,chr15	-,+	ATP10A,SNORD109A	1548,-582872
chr16:28072940-28073517	chr16	+	28073015	28073495	True	NM_001024401,NM_001109763	chr16,chr16	+,-	SBK1,GSG1L	230344,1385
chr10:131764067-131765032	chr10	+	131764121	131764966	True	NM_001005463,NM_006541	chr10,chr10	-,+	EBF3,GLRX3	-2030,169672
chr12:106703564-106703788	chr12	+	106703563	106703781	True	NM_006825,NM_152772	chr12,chr12	-,+	CKAP4,TCP11L2	-61850,-7034
chr1:247068721-247069601	chr1	+	247068828	247069606	True	NR_015422,NM_015446	chr1,chr1	+,-	LOC149134,AHCTF1	-115960,25170
chr11:2227488-2227745	chr11	+	2227492	2227782	True	NM_199293,NR_028044	chr11,chr11	-,+	TH,IGF2AS	-34457,-65798
chr12:973570-974404	chr12	+	973721	974313	True	NM_134424,NM_213655	chr12,chr12	-,+	RAD52,WNK1	84600,-111693
chrX:140085598-140086109	chrX	+	140085660	140085852	True	NM_032461,NR_031725,NM_145664,NM_139019	chrX,chrX,chrX,chrX	+,-,+,+	SPANXB1,MIR320D2,SPANXB2,SPANXF1	-955,-77276,-955,-955
chrX:140085598-140086109	chrX	-	140335756	140335806	False	NM_022661,NM_145664	chrX,chrX	-,+	SPANXC,SPANXB2	890,-239046
chrX:140085598-140086109	chrX	+	140097665	140097857	False	NM_032461,NR_031725,NM_145664,NM_139019	chrX,chrX,chrX,chrX	+,-,+,+	SPANXB1,MIR320D2,SPANXB2,SPANXF1	-955,-89281,-955,-955
chrX:110925921-110926473	chrX	+	110925941	110926510	True	NM_001168385,NR_033125,NM_001039210,NR_033134,NM_018466,NR_033127,NR_033131,NR_033132,NR_033124,NM_001099922,NR_033129,NR_033128,NM_178153	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,+,+,+,+,+,+,+,-	ALG13,ALG13,ALG13,ALG13,ALG13,ALG13,ALG13,ALG13,ALG13,ALG13,ALG13,ALG13,DCX	-1647,-1647,-1647,-1595,-1647,-1595,-1595,-1108,-1647,-1647,-1595,-1595,-270481
chr13:25668912-25669745	chr13	+	25669112	25669222	True	NM_152704,NM_030979	chr13,chr13	-,+	FAM123A,PABPC3	76693,1053
chr20:42839476-42839766	chr20	+	42839600	42839754	True	NM_024034,NM_016470	chr20,chr20	+,-	GDAP1L1,C20orf111	36153,-169
chr5:150601219-150603110	chr5	+	150601286	150603096	True	NM_000405,NM_015621	chr5,chr5	+,-	GM2A,CCDC69	29516,608
chr9:111931560-111933102	chr9	+	111931808	111932837	True	NM_014334,NM_017832	chr9,chr9	-,+	C9orf4,C9orf6	-2237,-235191
chr1:183604871-183605330	chr1	+	183604895	183605195	True	NM_015149,NM_005717	chr1,chr1	+,-	RGL1,ARPC5	12,90
chr7:75025073-75026032	chr7	+	75025226	75025905	True	NM_198853,NM_198924,NR_003614	chr7,chr7,chr7	+,+,-	TRIM74,TRIM73,PMS2L2	-374,-374,-37011
chr7:75025073-75026032	chr7	-	72741624	72741760	False	NM_001135211,NM_003602,NM_178125	chr7,chr7,chr7	+,+,-	FKBP6,FKBP6,TRIM50	394,539,375
chr7:75025073-75026032	chr7	-	72438994	72439673	False	NR_033323,NR_003602	chr7,chr7	-,+	NSUN5P2,LOC541473	-13692,518
chr11:4839997-4840619	chr11	+	4840092	4840630	True	NM_001004753,NM_001005177	chr11,chr11	+,-	OR51F2,OR52R1	1985,-14482
chr7:98474130-98475001	chr7	+	98474459	98474782	True	NR_037403,NM_001134450,NM_001134451,NM_152913,NM_003496	chr7,chr7,chr7,chr7,chr7	+,-,-,-,+	MIR3609,TMEM130,TMEM130,TMEM130,TRRAP	4490,-6786,-6786,-6786,1330
chr13:97878214-97878431	chr13	+	97878296	97878372	True	NM_144778,NM_080818,NM_207304	chr13,chr13,chr13	+,-,+	MBNL2,OXGR1,MBNL2	-3780,-231692,-3780
chr16:3703313-3703662	chr16	+	3703345	3703521	True	NM_005223,NM_032444	chr16,chr16	+,-	DNASE1,SLX4	-463,-41760
chr1:149576287-149576806	chr1	+	149576308	149576840	True	NM_001024599,NR_024510	chr1,chr1	-,+	HIST2H2BF,LOC728855	-177079,88
chr1:149576287-149576806	chr1	-	147931583	147932118	False	NM_001097616,NR_027468	chr1,chr1	+,-	GPR89C,FLJ39739	-506067,-82
chr1:149576287-149576806	chr1	-	144520633	144520691	False	NR_024584,NM_001037675	chr1,chr1	-,+	LOC728875,NBPF9	1328,94267
chr1:149576287-149576806	chr1	-	144340385	144340929	False	NR_024584,NM_001037675,NR_024510,NR_024511	chr1,chr1,chr1,chr1	-,+,-,-	LOC728875,NBPF9,LOC728855,LOC728855	876,274029,-100,-100
chr15:75019374-75019861	chr15	+	75019462	75019737	True	NM_000499,NM_000761	chr15,chr15	-,+	CYP1A1,CYP1A2	-1585,21446
chr12:93408912-93409367	chr12	+	93409106	93409214	True	NM_001004330,NM_003566	chr12,chr12	+,-	PLEKHG7,EEA1	-278895,-85999
chr22:32602405-32602687	chr22	+	32602555	32602665	True	NR_033411,NM_001098527,NM_001159546,NM_001159545	chr22,chr22,chr22,chr22	+,-,-,-	SLC5A1,RFPL2,RFPL2,RFPL2	-147449,-3091,-4018,-1837
chr17:48247697-48249072	chr17	+	48247887	48248842	True	NR_024192,NR_024193,NM_001135697,NM_000023	chr17,chr17,chr17,chr17	-,-,+,+	HILS1,HILS1,SGCA,SGCA	1046,1046,-4572,-4572
chr11:128810808-128811499	chr11	+	128810966	128811484	True	NM_000890,NM_001195194,NM_001195195,NM_022112	chr11,chr11,chr11,chr11	+,-,-,-	KCNJ5,TP53AIP1,TP53AIP1,TP53AIP1	-49704,-3237,1860,1860
chr7:77465289-77466127	chr7	+	77465569	77465830	True	NM_001127357,NM_032936,NM_020432,NM_001127359	chr7,chr7,chr7,chr7	+,-,+,+	PHTF2,TMEM60,PHTF2,PHTF2	3616,-37822,3616,3616
chr17:10409900-10411494	chr17	+	10410145	10411260	True	NM_005963,NM_020233	chr17,chr17	-,+	MYH1,C17orf48	10650,189666
chr12:120934146-120934386	chr12	+	120934202	120934366	True	NM_003769,NM_001037495,NM_003746	chr12,chr12,chr12	-,+,+	SRSF9,DYNLL1,DYNLL1	-26644,-394,-394
chr12:64197602-64199542	chr12	+	64197970	64199572	True	NM_014254,NM_173812	chr12,chr12	+,-	TMEM5,DPY19L2	-24384,-135616
chr1:48909350-48911186	chr1	+	48909708	48911060	True	NM_001135181,NM_019073	chr1,chr1	+,-	SLC5A9,SPATA6	-221402,26867
chr1:113048411-113050160	chr1	+	113048947	113049938	True	NR_036210,NM_024494	chr1,chr1	-,+	MIR4256,WNT2B	-44492,1431
chr2:10860548-10861205	chr2	+	10860594	10861134	True	NM_001039362,NM_144583,NM_024894	chr2,chr2,chr2	+,+,-	ATP6V1C2,ATP6V1C2,NOL10	640,640,-30482
chr10:71210315-71210648	chr10	+	71210614	71210696	True	NM_001057,NM_012339	chr10,chr10	-,+	TACR2,TSPAN15	-33940,529
chr14:27067628-27068352	chr14	+	27067628	27068368	True	NM_002515,NM_006489,NR_036193,NM_006491	chr14,chr14,chr14,chr14	-,-,+,-	NOVA1,NOVA1,MIR4307,NOVA1	-668,-668,309479,-668
chr9:505562-507207	chr9	+	505749	507127	True	NM_152569,NM_015158	chr9,chr9	-,+	C9orf66,KANK1	-289856,-1099
chr17:79342574-79342786	chr17	+	79342576	79342772	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	30767,-38102
chr22:46732785-46733513	chr22	+	46732865	46733416	True	NR_024009,NM_018006	chr22,chr22	-,+	CN5H6.4,TRMU	-40308,-1618
chr2:27258483-27259341	chr2	+	27258545	27259171	True	NM_001083590,NM_017727,NM_001134693	chr2,chr2,chr2	+,+,-	TMEM214,TMEM214,OST4	-2822,-2822,35446
chr22:25329757-25331455	chr22	+	25330274	25331356	True	NM_001145206,NM_001001663	chr22,chr22	+,-	KIAA1671,TMEM211	92584,4008
chr17:59532656-59533512	chr17	+	59532695	59533293	True	NM_199290,NM_018488	chr17,chr17	-,+	NACA2,TBX4	135320,513
chr5:138718672-138718912	chr5	+	138718761	138718839	True	NM_001033112,NM_016459,NM_005847,NM_152685	chr5,chr5,chr5,chr5	+,-,-,-	PAIP2,MZB1,SLC23A1,SLC23A1	-40687,6816,250,250
chr2:240965676-240965918	chr2	+	240965742	240965944	True	NM_001005853,NR_037808,NM_004544	chr2,chr2,chr2	-,+,-	OR6B2,LOC150935,NDUFA10	3954,-281239,-923
chr14:35871324-35871713	chr14	+	35871335	35871633	True	NM_002791,NM_020529	chr14,chr14	+,-	PSMA6,NFKBIA	-109819,2377
chr16:88521374-88521781	chr16	+	88521388	88521650	True	NM_000101,NM_153813	chr16,chr16	-,+	CYBA,ZFPM1	195857,-1425
chr2:203996416-203997014	chr2	+	203996677	203997003	True	NM_177538,NM_018256	chr2,chr2	+,-	CYP20A1,WDR12	106160,-219728
chr1:59251380-59251606	chr1	+	59251424	59251646	True	NM_002228,NR_034014,NR_034015	chr1,chr1,chr1	-,+,+	JUN,LOC100131060,LOC100131060	-1639,-652,-652
chr7:6491799-6493034	chr7	+	6492022	6492910	True	NM_001142936,NM_018890,NM_139179	chr7,chr7,chr7	-,+,-	DAGLB,RAC1,DAGLB	-4379,-77948,-4379
chr6:14803688-14803999	chr6	+	14803702	14803947	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	442579,859393
chr19:4300476-4301830	chr19	+	4300643	4301878	True	NM_001169126,NM_024333,NM_144615	chr19,chr19,chr19	-,+,-	TMIGD2,FSD1,TMIGD2	600,2712,600
chr2:162017297-162017629	chr2	+	162017382	162017666	True	NM_016836,NM_001199135	chr2,chr2	-,+	RBMS1,TANK	-667064,-499
chrX:129517540-129519038	chrX	+	129517599	129518881	True	NM_016024,NM_178471	chrX,chrX	+,-	RBMX2,GPR119	17061,680
chr3:41268824-41269245	chr3	+	41268823	41269154	True	NM_001904,NM_017886	chr3,chr3	+,-	CTNNB1,ULK4	-27941,734564
chr5:1009374-1009584	chr5	+	1009374	1009584	True	NM_033120,NM_006598	chr5,chr5	+,-	NKD2,SLC12A7	-257,102638
chr11:61350689-61350997	chr11	+	61350825	61350979	True	NM_004200,NR_002775	chr11,chr11	-,+	SYT7,RPLP0P2	-2527,31528
chr15:52386405-52387526	chr15	+	52386664	52387494	True	NM_002748,NM_020396	chr15,chr15	+,-	MAPK6,BCL2L10	-75304,17528
chr22:38882077-38882341	chr22	+	38882149	38882341	True	NM_030881,NM_001098505,NM_006855	chr22,chr22,chr22	-,-,+	DDX17,DDX17,KDELR3	2244,2244,-18117
chr1:245320179-245320511	chr1	+	245320337	245320547	True	NM_018012,NM_031844	chr1,chr1	+,-	KIF26B,HNRNPU	-2102,-292510
chr3:187391023-187392789	chr3	+	187391109	187392605	True	NM_001048,NR_034062	chr3,chr3	-,+	SST,LOC100131635	-2908,27548
chr1:151882368-151882820	chr1	+	151882479	151882761	True	NR_024237,NM_053055	chr1,chr1	+,-	LOC100132111,THEM4	-71586,-118
chr1:203320341-203320730	chr1	+	203320379	203320727	True	NM_002023,NM_006763	chr1,chr1	-,+	FMOD,BTG2	-90,-45766
chr4:103651439-103651830	chr4	+	103651451	103651851	True	NM_001008388,NM_005908	chr4,chr4	+,-	CISD2,MANBA	138283,30350
chr15:98502000-98503013	chr15	+	98502236	98503060	True	NM_183376,NR_024173	chr15,chr15	+,-	ARRDC4,LOC91948	872,-84577
chr10:51572612-51573059	chr10	+	51572652	51572838	True	NM_005437,NM_006327,NM_001145263,NM_001145262,NM_001145261,NM_001145260	chr10,chr10,chr10,chr10,chr10,chr10	+,-,+,+,+,+	NCOA4,TIMM23,NCOA4,NCOA4,NCOA4,NCOA4	-339,50550,-7595,3446,-7595,-7595
chr8:64079615-64080576	chr8	+	64079615	64080625	True	NM_152758,NM_000370	chr8,chr8	+,-	YTHDF3,TTPA	495,-81003
chr17:41472274-41473046	chr17	+	41472340	41472886	True	NR_027412,NM_001661,NR_027413	chr17,chr17,chr17	-,+,-	LOC100130581,ARL4D,LOC100130581	-6074,3466,-6074
chr12:6495273-6496427	chr12	+	6495388	6496432	True	NM_002342,NM_001159575	chr12,chr12	+,-	LTBR,SCNN1A	-2082,-8865
chr11:118794237-118794716	chr11	+	118794255	118794733	True	NM_032966,NM_182557	chr11,chr11	+,-	CXCR5,BCL9L	-30205,-12642
chr5:150535924-150536168	chr5	+	150536015	150536206	True	NM_000405,NM_001155	chr5,chr5	+,-	GM2A,ANXA6	96406,1287
chr7:123297308-123298187	chr7	+	123297394	123298222	True	NM_207163,NM_003941	chr7,chr7	+,-	LMOD2,WASL	-1585,90944
chr22:24667048-24667265	chr22	+	24667090	24667312	True	NM_001145468,NM_015330,NM_004121	chr22,chr22,chr22	+,+,-	SPECC1L,SPECC1L,GGT5	-355,-355,-25980
chr3:51994887-51995314	chr3	+	51994890	51995214	True	NM_033008,NM_033010,NM_080865,NM_001174100,NM_020418	chr3,chr3,chr3,chr3,chr3	-,-,+,-,-	PCBP4,PCBP4,GPR62,PCBP4,PCBP4	6318,1744,-5611,6318,6286
chr10:82299735-82300090	chr10	+	82299756	82300134	True	NM_207372,NM_138812,NM_001145719	chr10,chr10,chr10	+,-,+	SH2D4B,DYDC1,SH2D4B	-2149,-183256,440
chr16:4611806-4613341	chr16	+	4611823	4613259	True	NM_001145011,NM_013399	chr16,chr16	+,-	LOC342346,C16orf5	-5383,-23007
chr12:51441919-51442213	chr12	+	51442025	51442107	True	NM_001174125,NM_015416,NM_001024668	chr12,chr12,chr12	-,+,+	SLC11A2,LETMD1,LETMD1	-19967,-2,-2
chr1:151253995-151254533	chr1	+	151254136	151254518	True	NM_020832,NM_001198773	chr1,chr1	+,-	ZNF687,PI4KB	272,45665
chrX:107019888-107020892	chrX	+	107020246	107020924	True	NM_198057,NM_012216	chrX,chrX	-,+	TSC22D3,MID2	-1229,48159
chr13:29070174-29070489	chr13	+	29070176	29070404	True	NM_015932,NM_001159920,NM_001160031,NM_001160030,NM_002019	chr13,chr13,chr13,chr13,chr13	+,-,-,-,-	POMP,FLT1,FLT1,FLT1,FLT1	162736,-911,-911,-911,-911
chr14:65008521-65008960	chr14	+	65008616	65008970	True	NM_006977,NM_021979,NM_172365	chr14,chr14,chr14	-,+,+	ZBTB25,HSPA2,C14orf50	-38062,-1481,7649
chr22:40305197-40306571	chr22	+	40305196	40306374	True	NM_004810,NM_152512	chr22,chr22	+,-	GRAP2,ENTHD1	-8165,-15402
chr6:43279352-43280368	chr6	+	43279526	43279799	True	NM_153320,NM_206922	chr6,chr6	+,-	SLC22A7,CRIP3	-13587,-2996
chr8:146175718-146175932	chr8	+	146175834	146175902	True	NM_001029976,NM_006958,NR_002807	chr8,chr8,chr8	-,-,+	ZNF16,ZNF16,TMED10P1	422,422,44348
chr1:113254661-113255061	chr1	+	113254690	113255016	True	NM_001042678,NM_001042679,NM_175744,NM_001004440,NM_005167,NM_182759	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,+	RHOC,RHOC,RHOC,FAM19A3,PPM1J,FAM19A3	-4665,-5012,-4665,8172,2984,8172
chr1:156885264-156886572	chr1	+	156885555	156886231	True	NM_144702,NR_030527	chr1,chr1	+,-	LRRC71,MIR765	4192,19857
chr7:138364743-138365414	chr7	+	138364786	138365322	True	NM_001139456,NM_001085429	chr7,chr7	-,+	SVOPL,TMEM213	-996,117416
chr17:43129575-43129955	chr17	+	43129607	43129871	True	NM_021079,NM_001128631,NM_024819	chr17,chr17,chr17	+,-,-	NMT1,DCAKD,DCAKD	8808,-629,8652
chr10:82208969-82210564	chr10	+	82208986	82210553	True	NM_001128309,NM_030927,NM_138812	chr10,chr10,chr10	+,+,-	TSPAN14,TSPAN14,DYDC1	3484,3484,-92486
chr8:11994787-11995482	chr8	+	11995170	11995238	True	NM_201402,NR_003275,NR_027425	chr8,chr8,chr8	-,-,+	USP17L2,LOC392196,FAM66D	1081,-8366,-21930
chr10:46092323-46093203	chr10	+	46092589	46092891	True	NM_001002265,NM_145021,NM_001169106	chr10,chr10,chr10	-,-,+	MARCH8,MARCH8,FAM21C	-2235,-2235,129756
chr8:110374945-110375161	chr8	+	110375095	110375199	True	NM_177531,NM_032869	chr8,chr8	+,-	PKHD1L1,NUDCD1	-453,-28745
chr1:8385394-8385749	chr1	+	8385411	8385779	True	NM_001042682,NM_001080397	chr1,chr1	-,+	RERE,SLC45A1	98018,-1072
chr22:21922515-21923005	chr22	+	21922587	21922963	True	NM_001128633,NR_028437,NM_003347,NR_028436	chr22,chr22,chr22,chr22	-,+,+,+	RIMBP3C,UBE2L3,UBE2L3,UBE2L3	-16837,-681,-681,-681
chrY:59001644-59002158	chrY	+	59001748	59002152	True	NR_002179,NM_005840	chrY,chrY	-,+	TTTY17C,SPRY3	-31670828,98304
chr19:59026136-59026537	chr19	+	59026189	59026349	True	NM_012254,NM_032792,NM_005762	chr19,chr19,chr19	-,-,+	SLC27A5,ZBTB45,TRIM28	-2757,4622,29486
chr19:55837632-55838019	chr19	+	55837894	55838068	True	NM_001085488,NM_032701	chr19,chr19	-,+	TMEM150B,SUV420H2	-1186,13152
chr11:2950102-2950642	chr11	+	2950285	2950637	True	NM_002555,NM_003311	chr11,chr11	+,-	SLC22A18,PHLDA2	-26824,63
chr8:11995733-11995936	chr8	+	11995874	11995936	True	NM_201402,NR_003275,NR_027425	chr8,chr8,chr8	-,-,+	USP17L2,LOC392196,FAM66D	383,-9070,-22634
chr8:11995733-11995936	chr8	-	7190241	7190303	False	NR_027423,NR_003668	chr8,chr8	-,+	FAM66B,DEFB109P1B	22623,-19924
chr8:11995733-11995936	chr8	-	7194969	7195031	False	NR_027423,NR_003668	chr8,chr8	-,+	FAM66B,DEFB109P1B	17895,-24652
chr8:11995733-11995936	chr8	+	7830380	7830442	False	NR_003668,NR_027424	chr8,chr8	-,+	DEFB109P1B,FAM66E	24651,-17896
chr8:11995733-11995936	chr8	+	7835112	7835174	False	NR_027424,NR_003668	chr8,chr8	+,-	FAM66E,DEFB109P1B	-22628,19919
chr3:197687856-197688730	chr3	+	197687989	197688607	True	NM_001136049,NR_026787,NR_026786,NM_032263,NM_033029	chr3,chr3,chr3,chr3,chr3	+,+,+,-,+	LMLN,LMLN,LMLN,IQCG,LMLN	-976,-976,-976,-1103,-976
chr14:23755909-23757519	chr14	+	23756010	23757381	True	NM_004050,NM_020834	chr14,chr14	+,-	BCL2L2,HOMEZ	18589,-701
chr4:120552669-120553867	chr4	+	120552716	120553906	True	NM_033437,NM_033430,NR_037630,NM_001083	chr4,chr4,chr4,chr4	-,-,+,-	PDE5A,PDE5A,LOC645513,PDE5A	-3477,-4274,-176842,-2735
chr8:67622996-67623660	chr8	+	67623149	67623676	True	NM_001033578,NM_025054	chr8,chr8	+,-	SGK3,VCPIP1	976,-43697
chr15:90357646-90358011	chr15	+	90357781	90357847	True	NM_001039958,NM_001150	chr15,chr15	+,-	MESP2,ANPEP	-38243,275
chr1:198127734-198128152	chr1	+	198127733	198127991	True	NM_133494,NM_133262	chr1,chr1	+,-	NEK7,ATP6V1G3	-1677,382134
chr6:4020334-4020655	chr6	+	4020333	4020542	True	NM_173563,NM_003913	chr6,chr6	-,+	C6orf146,PRPF4B	58976,1026
chr16:57434648-57435156	chr16	+	57434889	57435163	True	NM_020313,NM_002987	chr16,chr16	-,+	CIAPIN1,CCL17	46256,3515
chr9:130920981-130921862	chr9	+	130921694	130921904	True	NR_027812,NM_024112	chr9,chr9	-,+	PTGES2,C9orf16	-30982,634
chr6:109707137-109708021	chr6	+	109707315	109708032	True	NM_001142404,NM_001142402,NM_001142403,NM_001142401,NM_006016,NM_003080	chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,-,-,+	CD164,CD164,CD164,CD164,CD164,SMPD2	-3553,-3553,-3553,-3553,-3553,53898
chr1:203695286-203695833	chr1	+	203695496	203695882	True	NR_027902,NR_003019	chr1,chr1	-,+	C1orf157,SNORA77	314560,2826
chr7:44579808-44580224	chr7	+	44579812	44580256	True	NM_001101648,NM_001003941,NM_013389	chr7,chr7,chr7	-,+,-	NPC1L1,OGDH,NPC1L1	708,65864,708
chr14:61203414-61204657	chr14	+	61203422	61204381	True	NM_002431,NM_001177963,NM_017420	chr14,chr14,chr14	+,+,-	MNAT1,MNAT1,SIX4	-2015,-2015,-12570
chr2:128421950-128422305	chr2	+	128422109	128422181	True	NM_005291,NM_017980	chr2,chr2	+,-	GPR17,LIMS2	-18721,36
chr6:41040299-41040772	chr6	+	41040446	41040804	True	NM_021705,NM_145063,NM_002505	chr6,chr6,chr6	+,-,+	NFYA,C6orf130,NFYA	-98,-258,-98
chr9:6007180-6007386	chr9	+	6007179	6007331	True	NM_001017969,NR_024095,NR_024094,NM_012416,NM_005511	chr9,chr9,chr9,chr9,chr9	-,-,-,-,+	KIAA2026,RANBP6,RANBP6,RANBP6,MLANA	722,8359,8359,8337,-116321
chrX:128655156-128656376	chrX	+	128655200	128656279	True	NM_003069,NM_000276,NM_139035	chrX,chrX,chrX	-,+,-	SMARCA1,OCRL,SMARCA1	1231,17972,1231
chr9:99672342-99673009	chr9	+	99672369	99672876	True	NR_028350,NM_001001662	chr9,chr9	+,-	LOC441454,ZNF782	-1063,-55980
chr9:99672342-99673009	chr9	-	97109326	97109833	False	NM_017561,NR_033937	chr9,chr9	-,+	FAM22F,LOC100132077	-18400,-14619
chr16:57830326-57830791	chr16	+	57830376	57830846	True	NM_001130099,NM_001130100,NM_005550,NM_005886	chr16,chr16,chr16,chr16	-,-,-,+	KIFC3,KIFC3,KIFC3,KATNB1	1139,5649,5649,-60767
chrX:12993401-12993765	chrX	+	12993466	12993756	True	NM_183049,NM_021109,NR_030727	chrX,chrX,chrX	+,+,-	TMSL3,TMSB4X,LOC349408	-293,-292,-32047
chr5:175132824-175133741	chr5	+	175132978	175133655	True	NM_022304,NM_032361,NM_000794	chr5,chr5,chr5	+,-,-	HRH2,THOC3,DRD1	-24574,261940,-261815
chr1:156864637-156865450	chr1	+	156864727	156865484	True	NM_014215,NM_001080471	chr1,chr1	-,+	INSRR,PEAR1	-36015,-1255
chr20:814316-814518	chr20	+	814400	814546	True	NM_033409,NM_207121,NM_001042353	chr20,chr20,chr20	-,+,+	C20orf54,FAM110A,FAM110A	-65172,2164,-95
chr3:194168122-194168965	chr3	+	194168136	194168740	True	NR_033929,NM_024524	chr3,chr3	+,-	FLJ34208,ATP13A3	39128,20283
chr7:991779-992046	chr7	+	991935	992053	True	NM_006869,NM_017781	chr7,chr7	-,+	ADAP1,CYP2W1	2286,30781
chr12:24715778-24716046	chr12	+	24715841	24716036	True	NR_030625,NM_152989	chr12,chr12	+,-	MIR920,SOX5	-350541,-461
chr11:85324094-85325405	chr11	+	85324118	85325360	True	NM_001193537,NM_001142699	chr11,chr11	+,-	TMEM126B,DLG2	14261,13012
chr19:780458-780797	chr19	+	780690	780748	True	NM_024888,NM_002819	chr19,chr19	-,+	LPPR3,PTBP1	41254,16643
chr16:30664357-30664605	chr16	+	30664417	30664618	True	NM_138447,NM_024031	chr16,chr16	-,+	ZNF689,PRR14	-42735,-2227
chr19:48112343-48112555	chr19	+	48112400	48112489	True	NM_015711,NM_001101419	chr19,chr19	+,-	GLTSCR1,ZNF541	-998,-53287
chr7:20888310-20889249	chr7	+	20888676	20889212	True	NM_198956,NR_026673	chr7,chr7	-,+	SP8,RPL23P8	-62168,-21822
chr20:11886818-11887205	chr20	+	11886819	11887259	True	NM_000214,NM_014962	chr20,chr20	-,+	JAG1,BTBD3	-1232125,11305
chr14:105950405-105950660	chr14	+	105950419	105950709	True	NM_001311,NM_001312,NM_001519,NM_001198983,NM_001134876,NM_001134877,NM_001134875	chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,+,-,+,+,+,+	CRIP1,CRIP2,BRF1,C14orf80,C14orf80,C14orf80,C14orf80	2547,-9339,-183090,5482,6876,5810,6876
chr1:78352901-78353764	chr1	+	78353210	78353466	True	NM_144573,NM_003902,NM_001172309	chr1,chr1,chr1	+,-,+	NEXN,FUBP1,NEXN	733,91361,733
chr9:109935723-109936935	chr9	+	109936274	109936902	True	NM_002874,NR_031752	chr9,chr9	+,-	RAD23B,MIR548Q	108641,-87558
chr20:38610874-38612132	chr20	+	38611039	38612097	True	NR_033905,NM_005461	chr20,chr20	+,-	DHX35,MAFB	-1020109,705829
chrX:118988245-118988981	chrX	+	118988546	118988986	True	NM_004541,NM_080632,NM_023010	chrX,chrX,chrX	+,-,-	NDUFA1,UPF3B,UPF3B	16747,-1555,-1555
chr2:240964977-240965252	chr2	+	240964993	240965298	True	NM_001005853,NR_037808,NM_004544	chr2,chr2,chr2	-,+,-	OR6B2,LOC150935,NDUFA10	4598,-280490,-174
chr18:48403357-48403789	chr18	+	48403408	48403641	True	NM_001168335,NM_002396,NM_001127174	chr18,chr18,chr18	+,+,-	ME2,ME2,MRO	1790,1790,-51654
chr21:46130451-46130902	chr21	+	46130455	46130734	True	NM_198699,NM_144991	chr21,chr21	+,-	KRTAP10-12,TSPEAR	-13419,818
chr5:64043609-64045226	chr5	+	64044353	64045211	True	NM_173829,NM_005869	chr5,chr5	-,+	SREK1IP1,CWC27	19335,19543
chr14:102602207-102602615	chr14	+	102602384	102602633	True	NM_144574,NM_181308,NM_181302,NM_001017963,NM_181291	chr14,chr14,chr14,chr14,chr14	+,+,+,-,+	WDR20,WDR20,WDR20,HSP90AA1,WDR20	3578,3578,3578,3503,3578
chr17:67059872-67061766	chr17	+	67060200	67061804	True	NM_080283,NM_002758	chr17,chr17	-,+	ABCA9,MAP2K6	-3064,349033
chr5:178289626-178289960	chr5	+	178289724	178290003	True	NR_024035,NM_058230	chr5,chr5	-,+	AACSP1,ZNF354B	-86447,-2822
chr1:85931159-85931591	chr1	+	85931194	85931545	True	NM_001554,NM_012137	chr1,chr1	+,-	CYR61,DDAH1	114898,-305
chr12:5510992-5511334	chr12	+	5510991	5511377	True	NM_020373,NM_001102654	chr12,chr12	-,+	ANO2,NTF3	544071,29902
chr17:72918788-72919138	chr17	+	72918810	72919184	True	NM_178160,NM_173477	chr17,chr17	+,-	OTOP2,USH1G	1185,217
chr19:58181429-58181909	chr19	+	58181585	58181949	True	NM_152677,NM_001085384	chr19,chr19	+,-	ZSCAN4,ZNF154	-1333,38680
chr17:56232903-56233702	chr17	+	56232908	56233612	True	NR_002307,NM_017777,NM_012374	chr17,chr17,chr17	+,-,+	MSX2P1,MKS1,OR4D1	707,63112,-444
chr16:30832527-30833319	chr16	+	30832561	30833329	True	NM_001080417,NM_014771	chr16,chr16	-,+	ZNF629,RNF40	-34038,-58982
chrY:24040665-24041585	chrY	+	24040967	24041035	True	NM_005058,NM_001006121,NR_001527,NM_001006120,NM_001006118	chrY,chrY,chrY,chrY,chrY	-,-,+,-,-	RBMY1A1,RBMY1B,TTTY6,RBMY1D,RBMY1E	-328,-294,250076,-334,-334
chrY:24040665-24041585	chrY	+	9162790	9162846	False	NR_001546,NR_001547,NM_001164471	chrY,chrY,chrY	-,-,+	TTTY20,RBMY1A3P,TSPY4	9645,-2307,32605
chrY:24040665-24041585	chrY	+	24064508	24064576	False	NM_001006120,NM_001006121,NR_001527,NM_001006118	chrY,chrY,chrY,chrY	-,-,+,-	RBMY1D,RBMY1B,TTTY6,RBMY1E	-334,-294,226535,-334
chrY:24040665-24041585	chrY	-	23672861	23672929	False	NM_005058,NM_001006121,NM_001006120,NR_001537,NM_001006118	chrY,chrY,chrY,chrY,chrY	+,+,+,-,+	RBMY1A1,RBMY1B,RBMY1D,TTTY13,RBMY1E	328,294,334,83673,334
chrY:24040665-24041585	chrY	-	23696402	23696470	False	NM_005058,NM_001006121,NM_001006120,NR_001537	chrY,chrY,chrY,chrY	+,+,+,-	RBMY1A1,RBMY1B,RBMY1D,TTTY13	328,294,334,60132
chr2:73057032-73058208	chr2	+	73057072	73058243	True	NM_015189,NM_003124	chr2,chr2	-,+	EXOC6B,SPR	-3895,56268
chr10:112258555-112258800	chr10	+	112258617	112258781	True	NM_005871,NM_004419	chr10,chr10	-,+	SMNDC1,DUSP5	-193910,-1043
chr20:48805277-48805593	chr20	+	48805358	48805512	True	NR_027889,NM_005194	chr20,chr20	-,+	TMEM189,CEBPB	-35023,1863
chr11:626622-626877	chr11	+	626689	626775	True	NM_031264,NM_021924,NM_001171968,NM_000797,NM_021920	chr11,chr11,chr11,chr11,chr11	-,-,-,+,-	CDHR5,CDHR5,CDHR5,DRD4,SCT	-1622,-1622,-1622,10529,448
chr5:190317-191026	chr5	+	190626	190932	True	NM_145265,NM_001080478	chr5,chr5	-,+	CCDC127,LRRC14B	27415,693
chr8:142429667-142430328	chr8	+	142429964	142430348	True	NM_005293,NM_007079,NM_032611	chr8,chr8,chr8	-,+,+	GPR20,PTP4A3,PTP4A3	-52599,1658,1658
chr16:4903035-4904125	chr16	+	4903040	4904033	True	NM_001079514,NM_016936,NM_032569	chr16,chr16,chr16	+,+,-	UBN1,UBN1,GLYR1	-5179,-1014,-5737
chr7:97601749-97602191	chr7	+	97601761	97601907	True	NR_002822,NM_014916	chr7,chr7	-,+	MGC72080,LMTK2	-123,134289
chr17:29653587-29654273	chr17	+	29653674	29653844	True	NM_001003927,NM_014210,NM_032932	chr17,chr17,chr17	-,-,+	EVI2A,EVI2A,RAB11FIP4	-4907,-4907,64797
chr9:123477531-123477829	chr9	+	123477530	123477790	True	NR_027442,NM_001080497	chr9,chr9	+,-	LOC100288842,MEGF9	77984,-765
chr16:28518298-28518889	chr16	+	28518398	28518886	True	NM_018690,NM_145659	chr16,chr16	+,-	APOBR,IL27	-12456,-243
chr12:100038758-100040286	chr12	+	100038972	100040165	True	NM_152788,NM_153364	chr12,chr12	-,+	ANKS1B,FAM71C	338317,1369
chr22:33200928-33201230	chr22	+	33201070	33201140	True	NM_003490,NM_000362	chr22,chr22	-,+	SYN3,TIMP3	201716,-4319
chr21:44744810-44745468	chr21	+	44744881	44745475	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	124428,101577
chr4:89512287-89512998	chr4	+	89512466	89512972	True	NM_032906,NM_014606	chr4,chr4	-,+	PIGY,HERC3	-67511,674
chr14:71274973-71275327	chr14	+	71275090	71275342	True	NM_033141,NM_014982	chr14,chr14	-,+	MAP3K9,PCNX	596,98779
chr19:5681414-5681928	chr19	+	5681460	5681870	True	NM_205767,NM_198708,NM_033643,NM_198533,NM_015414,NM_198706,NM_198707,NM_198704,NM_198705	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,+,+,+,+,+,+,+,+	C19orf70,HSD11B1L,RPL36,HSD11B1L,RPL36,HSD11B1L,HSD11B1L,HSD11B1L,HSD11B1L	-549,-436,8401,-464,8475,-436,-459,-476,-476
chr11:60866242-60866559	chr11	+	60866300	60866512	True	NM_017966,NM_014207	chr11,chr11	-,+	VPS37C,CD5	62454,3417
chr17:40763281-40764130	chr17	+	40763280	40764164	True	NM_001070,NR_026697,NM_178126	chr17,chr17,chr17	+,-,-	TUBG1,FAM134C,FAM134C	-1980,-1835,-1835
chrX:100878546-100878791	chrX	+	100878628	100878814	True	NM_019007,NM_001009584,NM_001184768,NR_033670,NM_016607,NM_177948,NM_177947,NR_033669	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,+,+,+,-	ARMCX6,ARMCX6,ARMCX6,ARMCX6,ARMCX3,ARMCX3,ARMCX3,ARMCX6	-5637,-5637,-5637,-5637,-559,-328,-559,-5637
chr10:69594306-69595420	chr10	+	69594601	69595102	True	NM_201262,NM_021800,NM_012238	chr10,chr10,chr10	-,-,+	DNAJC12,DNAJC12,SIRT1	2892,2892,49324
chr1:145609959-145610760	chr1	+	145610159	145610711	True	NM_014455,NM_006468	chr1,chr1	+,-	RNF115,POLR3C	324,223
chr20:6105025-6106055	chr20	+	6105202	6105696	True	NM_001127458,NM_017671	chr20,chr20	+,-	CRLS1,FERMT1	-117368,-1011
chr19:55796306-55796782	chr19	+	55796319	55796829	True	NM_012267,NM_032430,NM_001130106	chr19,chr19,chr19	-,+,-	HSPBP1,BRSK1,HSPBP1	-4568,-836,-4568
chr1:6238965-6239354	chr1	+	6239010	6239220	True	NM_207396,NM_015557	chr1,chr1	+,-	RNF207,CHD5	26968,1024
chr2:170438218-170439735	chr2	+	170438344	170439738	True	NM_004792,NM_024622	chr2,chr2	+,-	PPIG,FASTKD1	1111,-7920
chr21:43099663-43100731	chr21	+	43099754	43100720	True	NR_027272,NR_024367	chr21,chr21	-,+	C21orf129,NCRNA00111	35265,-343
chr6:14975511-14976302	chr6	+	14975598	14976140	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	270386,687216
chr6:114177481-114178738	chr6	+	114177579	114178781	True	NM_001527,NM_002356	chr6,chr6	-,+	HDAC2,MARCKS	113628,115
chr22:23488003-23489639	chr22	+	23488058	23489398	True	NM_004914,NM_014433	chr22,chr22	+,-	RAB36,RTDR1	-596,-3817
chr10:124606883-124607339	chr10	+	124606958	124607368	True	NR_037912,NR_027282,NM_022034	chr10,chr10,chr10	-,+,-	CUZD1,LOC399815,CUZD1	-1267,31780,-1267
chr13:39263021-39263531	chr13	+	39263042	39263572	True	NM_207361,NM_001144033	chr13,chr13	+,-	FREM2,STOML3	-1920,301474
chr7:44228310-44230174	chr7	+	44228401	44230148	True	NM_006555,NM_000162	chr7,chr7	+,-	YKT6,GCK	10429,-171
chr11:926910-927180	chr11	+	926914	927027	True	NM_001142675,NM_012305	chr11,chr11	-,+	CHID1,AP2A2	-11856,-1125
chr22:21773423-21774667	chr22	+	21773468	21774708	True	NM_015094,NR_003700	chr22,chr22	+,-	HIC2,PI4KAP2	-1826,97122
chr22:21773423-21774667	chr22	-	20425353	20426023	False	NR_003563,NR_026919	chr22,chr22	-,+	PI4KAP1,LOC150197	-26658,-231549
chr22:21773423-21774667	chr22	-	21869330	21870000	False	NR_003700,NM_003347	chr22,chr22	-,+	PI4KAP2,UBE2L3	1830,51956
chr12:66564065-66565222	chr12	+	66564284	66565038	True	NM_016056,NM_001142523	chr12,chr12	-,+	TMBIM4,IRAK3	-477,17939
chr1:68702213-68703984	chr1	+	68702358	68703974	True	NM_024911,NM_001924,NM_001002292,NM_001193334	chr1,chr1,chr1,chr1	-,+,-,-	WLS,GADD45A,WLS,WLS	-4074,-551561,-4129,-4129
chr1:21766580-21766877	chr1	+	21766641	21766907	True	NM_032264,NM_001113348	chr1,chr1	+,-	NBPF3,ECE1	-61,-94607
chr2:204397228-204398973	chr2	+	204397248	204398863	True	NM_203365,NM_213589,NM_006139	chr2,chr2,chr2	-,-,+	RAPH1,RAPH1,CD28	1247,1247,172334
chr3:146262698-146263296	chr3	+	146262708	146263167	True	NM_003412,NM_021105	chr3,chr3	+,-	ZIC1,PLSCR1	864013,-80
chrX:153148072-153148798	chrX	+	153148087	153148705	True	NM_000425,NM_001143963,NM_024003,NR_027419	chrX,chrX,chrX,chrX	-,-,-,+	L1CAM,L1CAM,L1CAM,AVPR2	-6688,-6688,-6688,19279
chr20:25373538-25373939	chr20	+	25373656	25373729	True	NM_015600,NM_021067,NM_001042472	chr20,chr20,chr20	-,+,-	ABHD12,GINS1,ABHD12	-2038,14593,-2038
chr1:178062464-178062711	chr1	+	178062509	178062756	True	NR_027982,NM_170692	chr1,chr1	-,+	LOC100302401,RASAL2	422,107
chr5:25216186-25217812	chr5	+	25216429	25217647	True	NR_037896,NM_020227	chr5,chr5	-,+	LOC340107,PRDM9	-375737,-1708763
chrX:40139904-40141573	chrX	+	40140428	40141495	True	NM_001123384,NM_005765	chrX,chrX	-,+	BCOR,ATP6AP2	-103846,298720
chr1:108777745-108778370	chr5	-	85580358	85580415	True	NR_003719,NR_036243	chr5,chr5	+,-	NBPF22P,MIR4280	-2154,830413
chr1:108777745-108778370	chr1	+	108777918	108778417	False	NM_001143987,NM_001143989	chr1,chr1	+,-	NBPF6,NBPF4	214486,8337
chr2:12854108-12855152	chr2	+	12854386	12855137	True	NR_027303,NM_021643,NR_036226	chr2,chr2,chr2	+,+,-	TRIB2,TRIB2,MIR4262	1860,1860,-877274
chr15:78234637-78235462	chr15	+	78234986	78235428	True	NM_001101404,NR_027024	chr15,chr15	+,-	SH2D7,LOC645752	149498,-15798
chr12:68598530-68599145	chr12	+	68598613	68599068	True	NM_018402,NM_001010942	chr12,chr12	-,+	IL26,RAP1B	20556,405583
chr5:151153298-151153733	chr5	+	151153298	151153772	True	NM_005754,NM_198395,NM_004045	chr5,chr5,chr5	+,+,-	G3BP1,G3BP1,ATOX1	-1876,-1876,-15088
chr2:178740263-178741982	chr2	+	178740516	178741525	True	NM_001077196,NM_152945	chr2,chr2	-,+	PDE11A,RBM45	11998,235656
chr8:11325056-11325580	chr8	+	11325354	11325628	True	NM_001715,NM_053279	chr8,chr8	+,-	BLK,FAM167A	25892,-1078
chr9:133973716-133974851	chr9	+	133974040	133974868	True	NM_001185095,NM_001185096,NM_031426,NM_001145106,NR_033701	chr9,chr9,chr9,chr9,chr9	+,+,+,-,+	AIF1L,AIF1L,AIF1L,FIBCD1,AIF1L	-2228,-2228,-2228,-159585,-2228
chr6:90116399-90117076	chr6	+	90116764	90116976	True	NM_021244,NM_014942	chr6,chr6	-,+	RRAGD,ANKRD6	5069,25920
chr8:18623400-18624977	chr8	+	18624098	18624986	True	NM_000015,NM_206909	chr8,chr8	+,-	NAT2,PSD3	-375404,41469
chr10:90600019-90600424	chr10	+	90600151	90600462	True	NM_144590,NM_001128215	chr10,chr10	-,+	ANKRD22,LIPM	11327,-37723
chr15:30830118-30830524	chr15	+	30830236	30830364	True	NM_148911,NR_026858	chr15,chr15	-,+	CHRFAM7A,FAM7A1	-144372,34393
chr15:30830118-30830524	chr15	-	32761668	32761796	False	NR_027470,NM_199357	chr15,chr15	-,+	FAM7A2,ARHGAP11A	-34418,145894
chr15:30830118-30830524	chr15	+	32871694	32871806	False	NM_199357,NR_036650	chr15,chr15	+,-	ARHGAP11A,LOC100288615	35884,-45752
chr15:30830118-30830524	chr15	-	28972714	28972773	False	NR_033351,NR_026589	chr15,chr15	-,+	GOLGA8F,WHAMML2	-194571,9955
chr15:30830118-30830524	chr15	-	30720278	30720406	False	NM_148911,NR_026858	chr15,chr15	-,+	CHRFAM7A,FAM7A1	-34414,144351
chr3:15465712-15466950	chr3	+	15466314	15466988	True	NM_033083,NM_152396	chr3,chr3	+,-	EAF1,METTL6	2075,2104
chr19:56705816-56706978	chr19	+	56706296	56706687	True	NM_033106,NM_001080456	chr19,chr19	+,-	GALP,ZSCAN5B	-18971,-1875
chr19:56705816-56706978	chr19	+	56737719	56737770	False	NM_024303,NM_033106	chr19,chr19	-,+	ZSCAN5A,GALP	1940,-50382
chr2:222437489-222437834	chr2	+	222437678	222437740	True	NM_153038,NM_004438	chr2,chr2	+,-	CCDC140,EPHA4	725125,-668
chr18:43200977-43201278	chr18	+	43200977	43201321	True	NM_007163,NM_020964	chr18,chr18	+,-	SLC14A2,EPG5	-6271,346034
chr7:150498790-150499078	chr7	+	150498889	150499057	True	NM_018487,NM_001101311,NM_001101314,NM_014020,NM_001101312	chr7,chr7,chr7,chr7,chr7	+,-,-,-,-	TMEM176A,TMEM176B,TMEM176B,TMEM176B,TMEM176B	-1086,-1268,-1268,-441,-1268
chr5:140534176-140535213	chr5	+	140535025	140535216	True	NM_018939,NM_031947,NR_001280	chr5,chr5,chr5	+,-,+	PCDHB6,SLC25A2,PCDHB17	-5244,148447,363
chr11:124484254-124485270	chr11	+	124484443	124484968	True	NM_032811,NR_016021,NM_052959,NM_170601	chr11,chr11,chr11,chr11	+,+,+,-	TBRG1,TBRG1,PANX3,SIAE	7773,7773,-3041,58868
chr4:10643426-10644967	chr4	+	10643886	10644972	True	NR_030298,NM_052964	chr4,chr4	+,-	MIR572,CLNK	725478,41471
chr5:115298803-115299025	chr5	+	115298827	115299025	True	NR_033363,NM_173800	chr5,chr5	-,+	ATG12,AQPEP	-121279,-727
chr2:27636285-27636728	chr2	+	27636454	27636589	True	NM_177983,NM_013392	chr2,chr2	-,+	PPM1G,NRBP1	-3958,14883
chr4:122871937-122872154	chr4	+	122872001	122872203	True	NM_001130698,NM_005033	chr4,chr4	-,+	TRPC3,EXOSC9	756,-149580
chr15:74900629-74901118	chr15	+	74900640	74901144	True	NM_001130028,NM_003992,NM_001142443	chr15,chr15,chr15	+,+,-	CLK3,CLK3,EDC3	6190,18,87292
chr19:47354120-47354673	chr19	+	47354199	47354660	True	NM_021575,NM_004069,NM_004491	chr19,chr19,chr19	-,-,+	AP2S1,AP2S1,GRLF1	4,4,67272
chr1:31769606-31770177	chr1	+	31769677	31769815	True	NM_016505,NM_004814	chr1,chr1	+,-	ZCCHC17,SNRNP40	26,-33
chr19:39693548-39694282	chr19	+	39693611	39694203	True	NM_001080468,NM_001001414	chr19,chr19	-,+	SYCN,NCCRP1	753,-6058
chr4:71251414-71251912	chr4	+	71251444	71251520	True	NM_144646,NM_006685	chr4,chr4	-,+	IGJ,SMR3B	280888,-2708
chr17:3793917-3795098	chr17	+	3794182	3795080	True	NM_172207,NM_172206,NM_032294,NM_031965	chr17,chr17,chr17,chr17	-,-,-,+	CAMKK1,CAMKK1,CAMKK1,GSG2	1307,-145,1307,-167036
chr9:5410283-5411238	chr9	+	5410549	5411121	True	NM_014143,NM_018465	chr9,chr9	+,-	CD274,C9orf46	39381,26789
chr16:67531173-67532072	chr16	+	67531179	67531929	True	NM_001138,NM_024519	chr16,chr16	-,+	AGRP,FAM65A	-13463,30787
chr6:111278174-111279003	chr6	+	111278239	111278872	True	NM_138408,NR_002932	chr6,chr6	+,-	GTF3C6,GSTM2P1	890,89942
chr1:164853884-164854256	chr1	+	164853888	164854301	True	NM_001174069,NM_002585	chr1,chr1	-,+	LMX1A,PBX1	471228,-325349
chr12:63545419-63545774	chr12	+	63545438	63545647	True	NM_000706,NR_029661	chr12,chr12	-,+	AVPR1A,MIRLET7I	994,-548023
chr12:51739637-51739878	chr12	+	51739727	51739917	True	NM_001971,NM_004858	chr12,chr12	-,+	CELA1,SLC4A8	596,78676
chrX:131347064-131348236	chrX	+	131347079	131348281	True	NM_021183,NM_001042452	chrX,chrX	-,+	RAP2C,MST4	3958,-189495
chr20:57596121-57596769	chr20	+	57596127	57596730	True	NM_030773,NM_006886	chr20,chr20	+,-	TUBB1,ATP5E	-1869,10731
chr11:65726422-65726668	chr11	+	65726434	65726702	True	NM_031450,NM_005146	chr11,chr11	-,+	C11orf68,SART1	-39903,2457
chr1:48229910-48230332	chr1	+	48229944	48230368	True	NM_001194986,NM_004474	chr1,chr1	-,+	LOC388630,FOXD2	232244,-328312
chr3:146251310-146252358	chr3	+	146251312	146252345	True	NM_003412,NM_021105	chr3,chr3	+,-	ZIC1,PLSCR1	874835,10340
chr2:197033095-197033891	chr2	+	197033102	197033706	True	NM_001080539,NM_004226	chr2,chr2	+,-	CCDC150,STK17B	470649,2686
chr5:68391606-68393033	chr5	+	68391925	68392563	True	NM_176816,NM_022902,NM_024055	chr5,chr5,chr5	-,+,+	CCDC125,SLC30A5,SLC30A5	223903,-2100,-2164
chr11:34466962-34468121	chr11	+	34467175	34468142	True	NM_001752,NM_198381	chr11,chr11	+,-	CAT,ELF5	-6754,65254
chr4:108850449-108851869	chr4	+	108850878	108851737	True	NM_005443,NM_183075	chr4,chr4	-,+	PAPSS1,CYP2U1	-209459,979
chr3:125579252-125579850	chr3	+	125579509	125579666	True	NR_024250,NR_031687	chr3,chr3	+,-	LOC100125556,MIR548I1	55777,-70114
chr3:128186800-128187231	chr3	+	128186806	128187280	True	NM_153330,NR_037890	chr3,chr3	-,+	DNAJB8,LOC285224	-715,-4420
chr5:173415428-173415741	chr5	+	173415477	173415771	True	NM_138369,NM_001144954	chr5,chr5	-,+	BOD1,C5orf47	-371811,390
chr19:58482224-58483132	chr19	+	58482246	58482848	True	NR_036508,NM_152474	chr19,chr19	+,-	LOC100128398,C19orf18	31413,3104
chr22:21625892-21626200	chr22	+	21625960	21626228	True	NR_024583,NR_002829	chr22,chr22	+,-	POM121L8P,P2RX6P	10485,-227422
chr22:21625892-21626200	chr22	+	18824911	18824973	False	NM_005675,NR_003267	chr22,chr22	+,-	DGCR6,GGT3P	68762,-45437
chr22:21625892-21626200	chr22	-	21492878	21493146	False	NR_037566,NR_002829	chr22,chr22	+,-	BCRP2,P2RX6P	-35624,-94340
chrX:48901591-48901966	chrX	+	48901595	48901912	True	NM_001163322,NM_006521	chrX,chrX	+,-	CCDC120,TFE3	14603,-605
chr5:96143819-96144041	chr5	+	96143846	96144085	True	NM_001198541,NM_001040458,NM_016442,NR_033798	chr5,chr5,chr5,chr5	-,-,-,+	ERAP1,ERAP1,ERAP1,CAST	5813,40,40,-64653
chr19:44008676-44008942	chr19	+	44008766	44008906	True	NM_198850,NM_174945	chr19,chr19	-,+	PHLDB3,ZNF575	129,28433
chr17:4938929-4939417	chr17	+	4938938	4939341	True	NM_006612,NM_001104577,NM_017986	chr17,chr17,chr17	+,-,-	KIF1C,GPR172B,GPR172B	-37746,-211,-211
chr2:201983079-201983396	chr2	+	201983231	201983407	True	NM_173822,NM_001202517,NM_001202516,NM_001202519,NM_001127183,NM_001127184,NM_003879	chr2,chr2,chr2,chr2,chr2,chr2,chr2	-,+,+,+,+,+,+	FAM126B,CFLAR,CFLAR,CFLAR,CFLAR,CFLAR,CFLAR	-46839,-2405,-2405,-2405,-13,-2405,-2405
chr7:107384911-107386500	chr7	+	107384951	107386358	True	NM_000111,NM_024814,NR_024199	chr7,chr7,chr7	-,+,+	SLC26A3,CBLL1,CBLL1	57370,-723,-723
chr10:17270700-17270953	chr10	+	17270793	17270879	True	NM_003380,NM_004412	chr10,chr10	+,-	VIM,TRDMT1	-586,-26723
chr7:30028301-30028590	chr7	+	30028302	30028574	True	NM_001197026,NM_001145513,NM_001145515,NM_014766,NM_001145514	chr7,chr7,chr7,chr7,chr7	+,-,-,-,-	PLEKHA8,SCRN1,SCRN1,SCRN1,SCRN1	39402,1210,901,901,1381
chr4:121992858-121993226	chr4	+	121992971	121993275	True	NM_024574,NR_024365	chr4,chr4	-,+	C4orf31,LOC100192379	448,692464
chr5:125802835-125804270	chr5	+	125803055	125804134	True	NM_001146322,NM_001182	chr5,chr5	+,-	GRAMD3,ALDH7A1	-2320,126999
chr5:38410673-38411384	chr5	+	38410714	38411243	True	NM_001127671,NM_182798,NM_182799	chr5,chr5,chr5	-,+,+	LIFR,EGFLAM,EGFLAM	145564,-7122,-7115
chr7:20871043-20872338	chr7	+	20871114	20872076	True	NM_198956,NR_026673	chr7,chr7	-,+	SP8,RPL23P8	-44606,-4254
chr21:39873284-39874942	chr21	+	39873286	39874504	True	NM_182918,NM_170737,NM_001136155	chr21,chr21,chr21	-,+,-	ERG,KCNJ15,ERG	-2858,-228917,-2858
chr8:37593110-37593812	chr8	+	37593152	37593822	True	NR_003671,NM_007175,NM_001003790,NM_001003791	chr8,chr8,chr8,chr8	-,+,+,+	LOC728024,ERLIN2,ERLIN2,ERLIN2	11792,274,376,274
chr11:71585080-71586792	chr11	+	71585651	71586796	True	NR_029192,NM_001002035	chr11,chr11	-,+	LOC100133315,DEFB108B	52747,-41465
chr19:42829990-42830244	chr19	+	42830024	42830290	True	NM_001145940,NM_001410	chr19,chr19	-,+	PAFAH1B3,MEGF8	-23072,-314
chr9:73028593-73028832	chr9	+	73028597	73028881	True	NM_001206,NM_015110	chr9,chr9	-,+	KLF9,SMC5	742,-154770
chr11:31375687-31377273	chr11	+	31375857	31376989	True	NM_181706,NM_181807	chr11,chr11	+,-	DNAJC24,DCDC1	14387,14418
chr6:27342741-27343013	chr6	+	27342752	27343008	True	NM_001076781,NR_024553,NR_002722	chr6,chr6,chr6	+,-,-	ZNF391,ZNF204P,ZNF204P	13515,195,-3448
chr3:14166766-14167931	chr3	+	14166934	14167968	True	NM_144636,NM_001098502,NM_024334	chr3,chr3,chr3	-,-,+	CHCHD4,CHCHD4,TMEM43	-563,-563,-545
chr15:92397898-92398566	chr15	+	92397907	92398595	True	NM_013272,NM_001145044,NR_021493	chr15,chr15,chr15	+,+,-	SLCO3A1,SLCO3A1,LOC100144604	-1020,-1020,716948
chr15:76296661-76298409	chr15	+	76297128	76298449	True	NM_138573,NM_152335	chr15,chr15	-,+	NRG4,C15orf27	6394,53849
chr20:23130531-23132085	chr20	+	23130616	23131976	True	NR_034149,NM_001052	chr20,chr20	-,+	LOC200261,SSTR4	-17343,-114610
chr20:18482192-18483981	chr20	+	18482578	18483888	True	NM_006606,NM_006363,NM_032986,NM_032985,NM_001172746,NM_001172745	chr20,chr20,chr20,chr20,chr20,chr20	-,+,+,+,+,+	RBBP9,SEC23B,SEC23B,SEC23B,SEC23B,SEC23B	-4691,4299,4299,4299,4321,4718
chr15:25519118-25519626	chr15	+	25519148	25519481	True	NR_003498,NR_003499,NR_001289,NM_130838,NR_003362,NR_001295	chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,-,+,+	HBII-52-45,HBII-52-46,SNORD109B,UBE3A,SNORD115-48,SNORD109A	-9525,-5535,4008,131223,-4269,4008
chr16:74810127-74811544	chr16	+	74810269	74811384	True	NM_024306,NM_032268	chr16,chr16	-,+	FA2H,ZNRF1	-1540,221530
chr7:3082247-3082665	chr7	+	3082256	3082686	True	NM_032415,NM_152744	chr7,chr7	-,+	CARD11,SDK1	873,258393
chr4:89300648-89301590	chr4	+	89300647	89300762	True	NM_017912,NM_001165136,NM_152542	chr4,chr4,chr4	+,+,-	HERC6,HERC6,PPM1K	-807,-807,-94759
chr11:1705741-1706061	chr11	+	1705867	1705927	True	NR_026642,NM_001012416	chr11,chr11	-,+	FAM99B,KRTAP5-6	982,12497
chr22:51201966-51203047	chr22	+	51202079	51203082	True	NM_001003789,NR_026981	chr22,chr22	-,+	RABL2B,RPL23AP82	19064,-6616
chr22:51201966-51203047	chr2	-	114403824	114404846	False	NR_024531,NM_013412	chr2,chr2	-,+	RPL23AP7,RABL2A	-19109,-19067
chr10:75459910-75461758	chr10	+	75461368	75461796	True	NM_001144000,NM_004922	chr10,chr10	-,+	AGAP5,SEC24C	-3814,42334
chr6:167802873-167803247	chr6	+	167803001	167803231	True	NM_004610,NM_031949	chr6,chr6	-,+	TCP10,TTLL2	-5003,-64478
chr6:167802873-167803247	chr6	-	167582144	167582374	False	NM_005299,NM_001145121	chr6,chr6	-,+	GPR31,TCP10L2	-10825,1706
chr1:205170192-205170926	chr1	+	205170749	205170911	True	NM_014858,NM_015375,NM_199462	chr1,chr1,chr1	+,-,-	TMCC2,DSTYK,DSTYK	26126,9868,9868
chr17:3381333-3382983	chr17	+	3381563	3383005	True	NM_001170696,NM_001170697,NM_001170695,NM_001170698,NM_001170699,NM_000049,NM_032598,NM_001128085	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,+,-,+	SPATA22,SPATA22,SPATA22,SPATA22,SPATA22,ASPA,SPATA22,ASPA	-6421,-6437,-6421,-6464,-6496,-2328,-6522,-4220
chr16:1385580-1386544	chr16	+	1385693	1386575	True	NM_001001410,NM_001199098,NM_001199099,NM_003933,NM_001199097,NM_001199096	chr16,chr16,chr16,chr16,chr16,chr16	-,+,+,+,+,+	C16orf42,BAIAP3,BAIAP3,BAIAP3,BAIAP3,BAIAP3	15348,-2138,-2138,-1239,-2138,72
chr14:93389100-93389451	chr14	+	93389162	93389340	True	NM_005606,NM_001275	chr14,chr14	-,+	LGMN,CHGA	-174115,104
chr7:142759655-142761495	chr7	+	142759998	142761264	True	NR_002140,NM_001001667	chr7,chr7	-,+	OR6W1P,OR6V1	9,-10611
chr19:35262257-35263600	chr19	+	35262342	35263388	True	NM_001007248,NM_001145665	chr19,chr19	-,+	ZNF599,ZNF181	796,-36913
chr6:10886804-10887388	chr6	+	10886974	10887366	True	NM_004752,NM_001040274	chr6,chr6	-,+	GCM2,SYCP2L	-4876,1
chr1:247695141-247695970	chr1	+	247695214	247695902	True	NM_145278,NR_027309,NM_198074	chr1,chr1,chr1	+,-,-	C1orf150,LOC148824,OR2C3	16548,-1108,1289
chrX:100869813-100870957	chrX	+	100869841	100870867	True	NM_019007,NM_001009584,NM_001184768,NR_033670,NM_016607,NM_177948,NM_177947,NR_033669	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,+,+,+,-	ARMCX6,ARMCX6,ARMCX6,ARMCX6,ARMCX3,ARMCX3,ARMCX3,ARMCX6	2174,2174,2174,2174,7252,7483,7252,2174
chrX:100869813-100870957	chrX	-	100852889	100853915	False	NM_001009584,NM_016607	chrX,chrX	-,+	ARMCX6,ARMCX3	19126,24204
chr5:71806163-71806966	chr5	+	71806167	71806951	True	NM_024754,NM_152625	chr5,chr5	+,-	PTCD2,ZNF366	-190019,-2918
chr6:34664693-34664952	chr6	+	34664881	34664995	True	NM_022758,NM_024294,NM_003093	chr6,chr6,chr6	-,-,+	C6orf106,C6orf106,SNRPC	-256,-256,59875
chr10:35988671-35990347	chr10	+	35988917	35990223	True	NM_153368,NM_031866	chr10,chr10	+,-	GJD4,FZD8	-94631,-58555
chr14:65437931-65438223	chr14	+	65437931	65438271	True	NM_002028,NM_198686	chr14,chr14	+,-	FNTB,RAB15	15235,654
chrX:152736404-152736780	chrX	+	152736576	152736826	True	NM_017518,NM_001711	chrX,chrX	-,+	HAUS7,BGN	27,23520
chr1:150459731-150459955	chr1	+	150459815	150459973	True	NM_025150,NM_001197320	chr1,chr1	+,-	TARS2,MCL1	8,92291
chrX:36092502-36093435	chrX	+	36092502	36093284	True	NM_173695,NM_031442	chrX,chrX	+,-	CXorf59,TMEM47	-27511,-1417097
chr12:56652328-56653228	chr12	+	56652391	56653088	True	NM_173595,NM_144576,NM_001099337	chr12,chr12,chr12	-,+,+	ANKRD52,COQ10A,COQ10A	-248,7553,7978
chr16:283375-283677	chr16	+	283419	283508	True	NM_201412,NM_018032,NM_032039	chr16,chr16,chr16	-,-,+	LUC7L,LUC7L,ITFG3	-3970,-3970,1292
chr12:50449957-50450234	chr12	+	50450062	50450270	True	NM_020039,NM_001095,NM_013277	chr12,chr12,chr12	+,+,-	ACCN2,ACCN2,RACGAP1	1216,1216,-30755
chr12:100896892-100898205	chr12	+	100897060	100898179	True	NM_152317,NM_005123	chr12,chr12	-,+	DEPDC4,NR1H4	-236203,-29440
chr2:109337528-109338195	chr2	+	109337573	109337776	True	NM_022336,NM_006267	chr2,chr2	-,+	EDAR,RANBP2	268103,-1689
chr13:21668126-21668865	chr13	+	21668366	21668890	True	NM_014572,NM_005870	chr13,chr13	-,+	LATS2,SAP18	-32644,45762
chr10:79791209-79791746	chr10	+	79791431	79791793	True	NM_001026,NM_007055,NM_001142282,NM_001142283,NM_001142284,NM_033022,NM_001142285	chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,-,+,+,+,+,+	RPS24,POLR3A,RPS24,RPS24,RPS24,RPS24,RPS24	1724,-2133,1724,1724,1724,1724,1724
chr2:78186950-78187305	chr2	+	78187215	78187317	True	NR_024342,NM_198448	chr2,chr2	-,+	SNAR-H,REG3G	-5063,1065508
chr13:53091928-53093011	chr13	+	53092265	53093057	True	NM_016075,NR_002793	chr13,chr13	-,+	VPS36,TPTE2P3	-67502,-29201
chr13:53091928-53093011	chr13	-	52867828	52868620	False	NM_001098525,NR_033775	chr13,chr13	+,-	CKAP2,TPTE2P2	160874,-3709
chr2:135476803-135478164	chr2	+	135477192	135478194	True	NM_138326,NM_030923	chr2,chr2	+,-	ACMSD,TMEM163	117991,-621
chr12:40618871-40619183	chr12	+	40618961	40619225	True	NM_052885,NM_198578	chr12,chr12	-,+	SLC2A13,LRRK2	-119300,-199
chr22:51017481-51017767	chr22	+	51017513	51017755	True	NM_001145137,NM_001145136,NM_001145135,NM_001145134,NR_021492,NM_005198,NM_152245,NR_027928,NM_004377,NM_152246	chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,+,-,-,-,-,-	CPT1B,CPT1B,CPT1B,CPT1B,LOC100144603,CHKB,CPT1B,CHKB-CPT1B,CPT1B,CPT1B	-1007,-417,-417,-417,3699,3723,-417,3723,-619,-619
chr8:143486601-143487911	chr8	+	143486958	143487730	True	NM_145003,NM_001702	chr8,chr8	-,+	TSNARE1,BAI1	-2415,57646
chr16:28723287-28724067	chr16	+	28723329	28724019	True	NM_003752,NM_001099661,NM_001037808,NM_177536	chr16,chr16,chr16,chr16	+,+,+,-	EIF3C,EIF3CL,EIF3C,SULT1A1	-598,-595,-598,-88463
chr16:28723287-28724067	chr16	-	28413927	28414617	False	NM_003752,NM_018690,NM_001099661,NM_001037808	chr16,chr16,chr16,chr16	-,+,-,-	EIF3C,APOBR,EIF3CL,EIF3C	598,91375,595,598
chr18:56990346-56991672	chr18	+	56990803	56991287	True	NM_181654,NM_002091	chr18,chr18	-,+	CPLX4,GRP	-4922,-103454
chrX:105955302-105956150	chrX	+	105955323	105956086	True	NM_194463,NM_001171706	chrX,chrX	+,-	RNF128,RIPPLY1	13807,190532
chr13:60733613-60734075	chr13	+	60733788	60734038	True	NM_001042517,NM_001146071	chr13,chr13	-,+	DIAPH3,TDRD3	4141,236552
chr9:94122541-94123135	chr9	+	94122563	94123158	True	NM_001698,NR_037472	chr9,chr9	-,+	AUH,MIR3910-1	1098,275374
chr10:126643620-126644463	chr10	+	126643997	126644483	True	NM_022802,NM_017580	chr10,chr10	-,+	CTBP2,ZRANB1	72021,-13356
chr17:7136331-7136922	chr17	+	7136487	7136765	True	NM_001033859,NR_029896,NM_024297,NM_007278,NM_004422	chr17,chr17,chr17,chr17,chr17	+,-,-,-,-	ACADVL,MIR324,PHF23,GABARAP,DVL2	-13389,-9789,6114,9042,1152
chr4:15779426-15779707	chr4	+	15779469	15779749	True	NR_036464,NM_001775	chr4,chr4	-,+	FBXL5,CD38	-122434,181
chr19:44489045-44489334	chr19	+	44489098	44489172	True	NM_003445,NM_198089,NM_003425	chr19,chr19,chr19	+,+,-	ZNF155,ZNF155,ZNF45	-794,-794,-49687
chr21:44590165-44590377	chr21	+	44590172	44590374	True	NM_006758,NM_000394	chr21,chr21	-,+	U2AF1,CRYAA	-62484,-1082
chr17:79763290-79763701	chr17	+	79763598	79763730	True	NM_000160,NM_001093767	chr17,chr17	+,-	GCGR,FAM195B	-1639,27487
chr2:88421890-88422775	chr2	+	88422091	88422795	True	NM_018271,NM_001443	chr2,chr2	+,-	THNSL2,FABP1	47039,4906
chr4:176696425-176697750	chr4	+	176696436	176697748	True	NM_170710,NM_201591	chr4,chr4	+,-	WDR17,GPM6A	289236,36484
chr2:241836550-241837093	chr2	+	241836709	241837077	True	NM_024861,NM_001085437,NM_000030	chr2,chr2,chr2	-,-,+	C2orf54,C2orf54,AGXT	-5257,-1136,-28598
chr2:85107449-85107730	chr2	+	85107456	85107752	True	NM_021103,NM_001080824	chr2,chr2	+,-	TMSB10,C2orf89	25010,550
chr3:168837659-168838921	chr3	+	168837820	168838930	True	NR_030294,NM_005241	chr3,chr3	+,-	MIR551B,MECOM	-568231,25213
chr22:31892122-31892424	chr22	+	31892139	31892421	True	NM_001164501,NM_014775,NM_001007467,NM_001164502,NM_019843	chr22,chr22,chr22,chr22,chr22	-,+,+,-,-	EIF4ENIF1,SFI1,SFI1,EIF4ENIF1,EIF4ENIF1	-6592,-5,-5,-6265,-6265
chr3:196697736-196698883	chr3	+	196697848	196698756	True	NR_024388,NM_025163	chr3,chr3	+,-	LOC152217,PIGZ	-28405,-2144
chr2:120188910-120189229	chr2	+	120188931	120189195	True	NM_001017927,NM_183240	chr2,chr2	-,+	C2orf76,TMEM37	-64673,250
chr10:72199051-72199552	chr10	+	72199191	72199539	True	NM_018055,NM_004096	chr10,chr10	-,+	NODAL,EIF4EBP2	1976,-35381
chr1:231007541-231007988	chr1	+	231007540	231007761	True	NM_001136494,NM_032800,NM_022786	chr1,chr1,chr1	-,-,+	C1orf198,C1orf198,ARV1	-2205,-3238,107061
chr12:5278447-5279363	chr12	+	5278573	5279191	True	NM_006422,NM_002234	chr12,chr12	-,+	AKAP3,KCNA5	-524230,-125539
chr3:169580403-169580829	chr3	+	169580591	169580659	True	NM_001080460,NM_024727	chr3,chr3	+,-	LRRIQ4,LRRC31	-40940,7051
chr11:15095731-15096272	chr11	+	15095746	15096280	True	NM_001741,NM_000728	chr11,chr11	-,+	CALCA,CALCB	-101914,-651
chr15:89437829-89438126	chr15	+	89437893	89438063	True	NM_178232,NM_013227	chr15,chr15	-,+	HAPLN3,ACAN	757,-91270
chr3:182815874-182816709	chr3	+	182816127	182816634	True	NM_020166,NM_032047	chr3,chr3	-,+	MCCC1,B3GNT5	788,154397
chr2:70416569-70417773	chr2	+	70417165	70417717	True	NM_016297,NM_017880	chr2,chr2	+,-	PCYOX1,C2orf42	67513,484
chr19:3030832-3031621	chr19	+	3030960	3031670	True	NM_003260,NM_001144762,NM_024760	chr19,chr19,chr19	-,-,+	TLE2,TLE2,TLE6	-1795,-1348,-53479
chr3:61235725-61235966	chr3	+	61235755	61236011	True	NM_002841,NM_001166243,NM_002012	chr3,chr3,chr3	+,-,-	PTPRG,FHIT,FHIT	311231,1172,1172
chr6:46888522-46889469	chr6	+	46888784	46889386	True	NM_001098518,NM_005588	chr6,chr6	-,+	GPR116,MEP1A	378,-127741
chr19:1027389-1027676	chr19	+	1027537	1027701	True	NM_004368,NM_033420,NM_001033026,NM_201277	chr19,chr19,chr19,chr19	+,-,-,+	CNN2,C19orf6,C19orf6,CNN2	-1290,-6396,-6396,-1290
chr22:37979156-37980426	chr22	+	37979277	37980307	True	NM_152243,NM_006498	chr22,chr22	+,-	CDC42EP1,LGALS2	-22864,-3253
chr7:23523583-23524695	chr7	+	23523702	23524430	True	NM_006547,NR_026676	chr7,chr7	-,+	IGF2BP3,RPS2P32	-13707,5576
chr5:140751801-140753540	chr5	+	140751918	140753584	True	NM_018924,NM_032086,NM_032087,NM_032097,NM_032054,NM_018918,NM_018919,NM_005642,NM_018920	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,+,-,+	PCDHGB3,PCDHGA6,PCDHGA7,PCDHGB3,PCDHGA5,PCDHGA5,PCDHGA6,TAF7,PCDHGA7	-2007,66,8882,-2007,-8071,-8071,66,-51567,8882
chr6:28226275-28227163	chr6	+	28226558	28227205	True	NM_152736,NM_001111039,NM_001007531,NM_001023560,NM_019110	chr6,chr6,chr6,chr6,chr6	+,+,+,+,-	ZNF187,ZNF187,NKAPL,ZNF187,ZKSCAN4	7582,7582,52,7582,-6556
chr11:95016024-95017536	chr11	+	95016120	95017425	True	NM_144665,NM_015036	chr11,chr11	-,+	SESN3,ENDOD1	-51874,-193197
chr3:151036765-151037109	chr3	+	151036787	151037033	True	NM_053002,NM_023915	chr3,chr3	+,-	MED12L,GPR87	-232162,-2151
chr11:124932637-124932912	chr11	+	124932747	124932945	True	NM_198277,NM_001080546,NM_001145290	chr11,chr11,chr11	+,-,+	SLC37A2,TMEM218,SLC37A2	67,40310,67
chr2:91932618-91932926	chr2	+	91932660	91932960	True	NR_003503,NR_027238	chr2,chr2	+,-	GGT8P,LOC654342	30407,-84685
chr20:43438336-43438760	chr20	+	43438346	43438622	True	NM_182970,NM_022358	chr20,chr20	-,+	RIMS4,KCNK15	340,-63909
chr10:83637824-83639268	chr10	+	83637876	83639295	True	NM_001165973,NM_001165972,NM_138812,NM_001010848	chr10,chr10,chr10,chr10	+,+,-,+	NRG3,NRG3,DYDC1,NRG3	-484,-2857,-1521376,-2857
chr1:28697503-28698551	chr1	+	28697507	28697611	True	NM_014280,NM_001048183	chr1,chr1	-,+	DNAJC8,PHACTR4	-137965,-1466
chr6:99396135-99397164	chr6	+	99396157	99396877	True	NM_005604,NM_012160	chr6,chr6	+,-	POU3F2,FBXL4	-113628,-308
chr13:44454209-44454448	chr13	+	44454256	44454316	True	NM_153218,NM_001128303,NM_144974	chr13,chr13,chr13	+,+,-	C13orf31,C13orf31,CCDC122	-338,-887,-430
chr11:88041102-88042034	chr11	+	88041185	88041989	True	NM_000372,NM_001814	chr11,chr11	+,-	TYR,CTSC	869050,29002
chr17:40273871-40274312	chr17	+	40274120	40274196	True	NM_021078,NM_033194,NM_024119	chr17,chr17,chr17	-,+,-	KAT2A,HSPB9,DHX58	-738,559,-9369
chr15:81067061-81068904	chr15	+	81067288	81068815	True	NM_018689,NR_030393	chr15,chr15	+,-	KIAA1199,MIR549	2896,65649
chr8:42397248-42398396	chr8	+	42397401	42398292	True	NM_138436,NM_006749,NM_001135676,NM_001135675,NM_001135674	chr8,chr8,chr8,chr8,chr8	+,-,+,+,+	C8orf40,SLC20A2,C8orf40,C8orf40,C8orf40	-734,-333,-1154,-513,-687
chr15:42130660-42131598	chr15	+	42130665	42131547	True	NR_036195,NM_001114633	chr15,chr15	-,+	MIR4310,PLA2G4B	27252,-55
chr16:4403306-4405061	chr16	+	4403567	4404603	True	NM_016069,NM_138440	chr16,chr16	-,+	PAM16,VASN	-2194,17245
chr4:174453389-174454504	chr4	+	174453469	174454399	True	NR_003679,NM_021973	chr4,chr4	+,-	NBLA00301,HAND2	-1911,-2091
chr8:38034258-38034471	chr8	+	38034291	38034513	True	NM_001204878,NM_004874,NM_014462	chr8,chr8,chr8	+,+,-	BAG4,BAG4,LSM1	-236,-236,-265
chr3:37902912-37903146	chr3	+	37902911	37903066	True	NM_005808,NM_001008392,NM_001130964	chr3,chr3,chr3	+,+,-	CTDSPL,CTDSPL,PLCD1	602,602,163262
chr22:46693335-46694900	chr22	+	46693458	46694786	True	NR_024009,NM_016426	chr22,chr22	-,+	CN5H6.4,GTSE1	-901,-871
chr17:75881091-75882662	chr17	+	75881472	75882506	True	NM_001142640,NR_028337	chr17,chr17	+,-	TNRC6C,FLJ45079	117811,-1303
chr21:39479506-39480699	chr21	+	39479742	39480385	True	NM_005867,NR_026838	chr21,chr21	-,+	DSCR4,DSCR8	13126,13159
chr16:86610655-86610941	chr16	+	86610781	86610941	True	NM_005251,NM_005250,NR_027490	chr16,chr16,chr16	+,+,-	FOXC2,FOXL1,MTHFSD	-9975,1173,-21940
chr20:3067620-3068117	chr20	+	3067758	3067984	True	NM_000490,NM_000915	chr20,chr20	-,+	AVP,OXT	-2388,-15550
chr18:48725102-48725648	chr18	+	48725430	48725513	True	NM_005359,NM_016626	chr18,chr18	+,-	SMAD4,MEX3C	-168898,-1379
chr16:5147249-5147504	chr16	+	5147250	5147312	True	NM_019109,NM_201400,NM_201598	chr16,chr16,chr16	+,-,-	ALG1,FAM86A,FAM86A	-25491,527,527
chr22:41031244-41032164	chr22	+	41031322	41031992	True	NM_020831,NM_005297	chr22,chr22	-,+	MKL1,MCHR1	748,43189
chr4:41991810-41992262	chr4	+	41991944	41992174	True	NM_006345,NM_001159547,NM_001029955	chr4,chr4,chr4	+,-,+	SLC30A9,BEND4,DCAF4L1	348,162771,-8282
chr12:9316215-9317734	chr12	+	9316416	9317562	True	NM_002864,NR_036466	chr12,chr12	-,+	PZP,LOC100499405	43454,75036
chr21:11184675-11186165	chr21	+	11184704	11186197	True	NM_001187,NR_037458	chr21,chr21	-,+	BAGE,MIR3687	-85767,-1358552
chr15:23378492-23378780	chr15	+	23378494	23378754	True	NR_002824,NR_036470	chr15,chr15	-,+	HERC2P2,HERC2P7	-235,11967
chr15:23378492-23378780	chr15	+	20711848	20711962	False	NR_036432,NR_027411	chr15,chr15	-,+	HERC2P3,GOLGA8C	-415,55711
chr15:23378492-23378780	chr15	+	28567720	28567834	False	NM_004667,NR_033351	chr15,chr15	-,+	HERC2,GOLGA8F	-425,55949
chr15:23378492-23378780	chr15	-	28834104	28834194	False	NR_036443,NR_033351	chr15,chr15	+,-	HERC2P9,GOLGA8F	65393,-55961
chr1:156613785-156614217	chr1	+	156613929	156614233	True	NM_198427,NM_006617,NM_021948	chr1,chr1,chr1	+,-,+	BCAN,NES,BCAN	-2240,33006,-2240
chr9:37799630-37800260	chr9	+	37799709	37800121	True	NM_001002269,NM_024345	chr9,chr9	-,+	EXOSC3,DCAF10	-14642,668
chrX:132540958-132541854	chrX	+	132541316	132541776	True	NM_001101357,NM_001448	chrX,chrX	+,-	CCDC160,GPC4	829300,7479
chr2:55497820-55498244	chr2	+	55497820	55498158	True	NM_001005369,NR_027258,NM_002453	chr2,chr2,chr2	-,+,-	MTIF2,PRORSD1P,MTIF2	-1505,11296,-1436
chr7:100076710-100076962	chr7	+	100076714	100076888	True	NM_030935,NM_173564	chr7,chr7	-,+	TSC22D4,C7orf51	64,4661
chr14:23942250-23943101	chr14	+	23942507	23943033	True	NM_000257,NM_001042635,NM_015514	chr14,chr14,chr14	-,+,+	MYH7,NGDN,NGDN	-37637,-3660,-3660
chr3:52258815-52259281	chr3	+	52258870	52258930	True	NM_017442,NM_144641	chr3,chr3	-,+	TLR9,PPM1M	1299,20878
chr9:27292749-27294741	chr9	+	27293108	27294788	True	NM_001161585,NM_020641,NM_000459	chr9,chr9,chr9	-,-,+	C9orf11,C9orf11,TEK	2399,2399,-184012
chr5:308492-308898	chr5	+	308533	308779	True	NM_020731,NM_145265	chr5,chr5	+,-	AHRR,CCDC127	-4293,-90236
chr4:2795499-2795899	chr4	+	2795767	2795941	True	NM_001122681,NM_024309	chr4,chr4	+,-	SH3BP2,TNIP2	-1068,-37664
chr4:186345381-186346846	chr4	+	186346026	186346732	True	NR_028085,NM_001114357,NM_018359	chr4,chr4,chr4	-,+,-	UFSP2,C4orf47,UFSP2	457,3812,457
chr10:68687246-68687884	chr10	+	68687251	68687774	True	NM_001127384,NM_178011	chr10,chr10	-,+	CTNNA3,LRRTM3	737699,-1510
chr4:83296598-83297014	chr4	+	83296709	83297052	True	NM_001003810,NM_031369,NM_021204,NM_002138,NM_031370	chr4,chr4,chr4,chr4,chr4	-,-,+,-,-	HNRNPD,HNRNPD,ENOPH1,HNRNPD,HNRNPD	-1560,-1560,54673,-1560,-1560
chrX:97994049-97994494	chrX	+	97994110	97994539	True	NM_022144,NR_024608	chrX,chrX	+,-	TNMD,LOC442459	1845250,1200359
chr15:23210161-23211959	chr15	+	23210256	23210451	True	NR_024074,NR_003521	chr15,chr15	+,-	GOLGA8IP,WHAMML1	44790,-1899
chr15:64794654-64795111	chr15	+	64794754	64794964	True	NM_015042,NM_014736	chr15,chr15	+,-	ZNF609,KIAA0101	-3186,-121052
chr12:122652707-122654117	chr12	+	122653218	122653898	True	NM_152759,NM_001014336	chr12,chr12	+,-	LRRC43,IL31	-1007,4898
chr15:22742178-22744166	chr15	+	22743017	22743409	True	NR_027407,NM_001001413	chr15,chr15	-,+	GOLGA8DP,GOLGA6L1	-27289,-6822
chr15:22742178-22744166	chr15	-	28596501	28596598	False	NM_004667,NR_033351	chr15,chr15	-,+	HERC2,GOLGA8F	-29206,27185
chr15:22742178-22744166	chr15	+	28805073	28805420	False	NR_036443,NR_033351	chr15,chr15	+,-	HERC2P9,GOLGA8F	94167,-26930
chr15:22742178-22744166	chr15	-	20740208	20740261	False	NR_027411,NM_001145004	chr15,chr15	+,-	GOLGA8C,GOLGA6L6	27412,6906
chr15:22742178-22744166	chr15	-	23406774	23407493	False	NR_036470,NR_002824	chr15,chr15	+,-	HERC2P7,HERC2P2	-16103,-28515
chr6:25847136-25848092	chr6	+	25847147	25848120	True	NM_005074,NM_005495	chr6,chr6	-,+	SLC17A1,SLC17A4	-14860,-92277
chr11:3507256-3508141	chr11	+	3507627	3507886	True	NM_007152,NR_024248	chr11,chr11	-,+	ZNF195,LOC650368	-107179,-105494
chr11:3507256-3508141	chr11	-	71447136	71447614	False	NM_001005405,NM_001099653	chr11,chr11	-,+	KRTAP5-11,FAM86C	-153215,50942
chr15:67417152-67417514	chr15	+	67417186	67417356	True	NM_001145102,NM_024666	chr15,chr15	+,-	SMAD3,AAGAB	697,129768
chr6:8060795-8061216	chr6	+	8060831	8061060	True	NM_201280,NR_037616,NM_001199323,NM_001199322,NR_027712	chr6,chr6,chr6,chr6,chr6	-,-,-,-,+	MUTED,MUTED-TXNDC5,MUTED,MUTED,PIP5K1P1	3642,3642,3642,3642,-74552
chrX:124095210-124095726	chrX	+	124095522	124095744	True	NM_014253,NM_001163278,NM_001163279,NM_001195272	chrX,chrX,chrX,chrX	-,-,-,+	ODZ1,ODZ1,ODZ1,LOC100129520	1972,1972,1972,358224
chr6:31792052-31792888	chr6_qbl_hap6	+	3086003	3086277	False	NM_005346,NM_005345,NM_005527	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	+,+,-	HSPA1B,HSPA1A,HSPA1L	2885,-9123,-9521
chr6:31792052-31792888	chr6_dbb_hap3	+	3077940	3078214	False	NM_005346,NM_005345,NM_005527	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	+,+,-	HSPA1B,HSPA1A,HSPA1L	2884,-9120,-9518
chr6:31792052-31792888	chr6	+	31792353	31792627	True	NM_005346,NM_005345,NM_005527	chr6,chr6,chr6	+,+,-	HSPA1B,HSPA1A,HSPA1L	2884,-9120,-9518
chr6:31792052-31792888	chr6_apd_hap1	+	3107117	3107391	False	NM_005346,NM_005345,NM_005527	chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1	+,+,-	HSPA1B,HSPA1A,HSPA1L	2884,-9123,-9521
chr6:31792052-31792888	chr6_cox_hap2	+	3301936	3302210	False	NM_005346,NM_005345,NM_005527	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,+,-	HSPA1B,HSPA1A,HSPA1L	2883,-9123,-9521
chr12:122458571-122458815	chr12	+	122458592	122458774	True	NM_001171993,NM_020993,NM_001024808	chr12,chr12,chr12	-,+,+	HPD,BCL7A,BCL7A	-132075,1086,1086
chr12:32829579-32830414	chr12	+	32829769	32830082	True	NM_001040436,NM_012062,NM_005690,NM_012063	chr12,chr12,chr12,chr12	-,+,+,+	YARS2,DNM1L,DNM1L,DNM1L	78856,2054,2054,2054
chr4:25309785-25310095	chr4	+	25309862	25310051	True	NM_024936,NM_016955	chr4,chr4	+,-	ZCCHC4,SEPSECS	4344,-147658
chr9:131797816-131798036	chr9	+	131797828	131797950	True	NM_020145,NM_032809	chr9,chr9	-,+	SH3GLB2,FAM73B	-7249,1302
chr16:734708-735008	chr16	+	734731	735057	True	NM_032259,NM_005861,NM_003961,NM_001005920	chr16,chr16,chr16,chr16	-,+,+,-	WDR24,STUB1,RHBDL1,JMJD8	5393,-4667,-8707,-292
chr20:32725960-32727729	chr20	+	32726929	32727745	True	NM_001672,NM_003908	chr20,chr20	+,-	ASIP,EIF2S2	120425,-26844
chr22:20308160-20308777	chr22	+	20308404	20308714	True	NR_026919,NM_033257	chr22,chr22	+,-	LOC150197,DGCR6L	-114600,-776
chr22:20308160-20308777	chr22	-	18891823	18891873	False	NM_001195226,NM_005675	chr22,chr22	-,+	PRODH,DGCR6	32141,1862
chr1:41248320-41249100	chr1	+	41248407	41249131	True	NM_004700,NM_172163,NM_133467	chr1,chr1,chr1	+,+,-	KCNQ4,KCNQ4,CITED4	552,552,78937
chr6:15023617-15024294	chr6	+	15023739	15024286	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	222240,639058
chr19:43858442-43858757	chr19	+	43858449	43858523	True	NM_020406,NR_026881,NM_002784	chr19,chr19,chr19	+,+,-	CD177,PRG1,PSG9	-675,-5292,-84767
chrX:64756301-64757525	chrX	+	64756307	64757369	True	NM_001170650,NM_031206,NM_001170649,NM_001010888	chrX,chrX,chrX,chrX	-,-,-,+	LAS1L,LAS1L,LAS1L,ZC3H12B	-1621,-1621,-1621,-47743
chr1:150689411-150690128	chr1	+	150689597	150690111	True	NM_001199829,NM_032132,NR_036211	chr1,chr1,chr1	-,-,+	HORMAD1,HORMAD1,MIR4257	3303,3303,-165253
chr13:114108683-114108994	chr13	+	114108774	114108977	True	NM_017905,NM_138430,NM_199162	chr13,chr13,chr13	+,-,-	TMCO3,ADPRHL1,ADPRHL1	36330,-935,-5317
chr11:113783258-113784395	chr11	+	113783278	113783852	True	NM_020886,NM_006028	chr11,chr11	-,+	USP28,HTR3B	-37022,-7746
chr17:29629186-29629579	chr17	+	29629236	29629477	True	NM_002544,NM_032932	chr17,chr17	-,+	OMG,RAB11FIP4	-4856,89164
chr16:30388595-30389034	chr16	+	30388719	30388847	True	NM_013292,NM_052838,NM_015527	chr16,chr16,chr16	+,-,-	MYLPF,SEPT1,TBC1D10B	-2647,5374,-7197
chr1:114680335-114682274	chr1	+	114680443	114682304	True	NM_205848,NM_020190	chr1,chr1	-,+	SYT6,OLFML3	14218,-158464
chr1:120256896-120257209	chr1	+	120256907	120257215	True	NM_006623,NM_001166107	chr1,chr1	+,-	PHGDH,HMGCS2	-2539,54394
chrX:38219332-38219590	chrX	+	38219455	38219645	True	NM_001034853,NM_000531	chrX,chrX	-,+	RPGR,OTC	-32667,-7778
chr6:35992789-35993161	chr6	+	35992820	35993182	True	NM_052961,NM_001193476,NM_001315,NM_139014,NM_139013,NM_139012,NM_138718	chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,-,+,+,+,+,-	SLC26A8,SLC26A8,MAPK14,MAPK14,MAPK14,MAPK14,SLC26A8	-407,-515,2271,2271,2271,2271,-543
chr6:147831342-147832153	chr6	+	147831463	147832186	True	NM_001030060,NR_034115	chr6,chr6	+,-	SAMD5,LOC729178	-1686,-305713
chr22:37449204-37449585	chr22	+	37449311	37449595	True	NM_024681,NM_003312	chr22,chr22	+,-	KCTD17,TST	-1583,-33820
chr5:134210430-134210857	chr5	+	134210490	134210864	True	NM_002653,NM_024715	chr5,chr5	-,+	PITX1,TXNDC15	159150,-1081
chr17:291722-291942	chr17	+	291813	291935	True	NM_182705,NM_001013672	chr17,chr17	-,+	FAM101B,C17orf97	3846,-31746
chr3:128718199-128718679	chr3	+	128718229	128718722	True	NM_020741,NM_024768	chr3,chr3	-,+	KIAA1257,CCDC48	-5243,1749
chr1:48233023-48233485	chr1	+	48233030	48233526	True	NM_001194986,NM_004474	chr1,chr1	-,+	LOC388630,FOXD2	229086,-331392
chr6:27111960-27113242	chr6	+	27112313	27113280	True	NM_080596,NM_003495,NR_036096,NM_080593	chr6,chr6,chr6,chr6	+,+,+,-	HIST1H2AH,HIST1H4I,MIR3143,HIST1H2BK	1627,-5276,2124,1410
chr11:3212986-3213343	chr11	+	3212990	3213135	True	NR_027138,NM_145638	chr11,chr11	+,-	C11orf36,OSBPL5	26426,-26408
chr16:67466789-67467146	chr16	+	67466853	67467181	True	NM_013304,NM_000196	chr16,chr16	-,+	ZDHHC1,HSD11B2	-16514,-1868
chr22:50450097-50450372	chr22	+	50450106	50450408	True	NM_001001694,NM_001164104	chr22,chr22	-,+	IL17REL,MOV10L1	697,78026
chr10:46972865-46974558	chr10	+	46972889	46974315	True	NM_014696,NM_181519,NM_031912	chr10,chr10,chr10	+,-,-	GPRIN2,SYT15,SYT15	19230,-2288,-2288
chr2:69002216-69003253	chr2	+	69002336	69002898	True	NM_014482,NM_001166276,NM_014882	chr2,chr2,chr2	-,+,+	BMP10,ARHGAP25,ARHGAP25	95807,-454,-454
chr7:99934766-99935606	chr7	+	99935043	99935657	True	NR_036570,NR_003613,NR_036569	chr7,chr7,chr7	+,-,+	PILRB,PMS2P1,PILRB	-1419,-1113,-1419
chr7:99934766-99935606	chr7	-	74304662	74304720	False	NR_027777,NR_027776,NM_001025202,NR_027775	chr7,chr7,chr7,chr7	+,+,-,+	PMS2P5,PMS2P5,STAG3L2,PMS2P5	2173,2173,2069,2173
chr9:134610502-134610938	chr9	+	134610606	134610986	True	NM_007171,NM_005312	chr9,chr9	+,-	POMT1,RAPGEF1	-232368,1989
chr7:75568775-75569822	chr7	+	75568781	75569798	True	NM_031925,NR_002955	chr7,chr7	-,+	TMEM120A,SNORA14A	54253,3302
chr8:22128636-22130039	chr8	+	22128920	22129830	True	NM_001135721,NM_018068,NR_029714	chr8,chr8,chr8	+,+,-	PIWIL2,PIWIL2,MIR320A	3249,2979,-26364
chr4:186064951-186066161	chr4	+	186064963	186066000	True	NM_020827,NM_001151	chr4,chr4	-,+	KIAA1430,SLC25A4	59232,-597
chr19:1571227-1572252	chr19	+	1571383	1571909	True	NR_026557,NM_203304,NM_001174118	chr19,chr19,chr19	+,-,-	PLK5P,MEX3D,MEX3D	-47356,-3326,-3326
chr13:30169967-30170193	chr13	+	30170072	30170144	True	NM_015233,NM_003045	chr13,chr13	+,-	MTUS2,SLC7A1	-167346,-247
chr6:145982954-145984482	chr6	+	145982954	145984163	True	NM_000838,NM_001018041	chr6,chr6	+,-	GRM1,EPM2A	364618,72887
chr19:53390998-53391738	chr19	+	53391128	53391652	True	NM_152473,NM_207333	chr19,chr19	+,-	HERV-V1,ZNF320	125691,2999
chr19:53390998-53391738	chr19	-	53079001	53079053	False	NM_001172655,NM_018260,NM_001105549	chr19,chr19,chr19	+,+,-	ZNF701,ZNF701,ZNF83	-5137,-5528,62643
chr12:49659356-49659603	chr12	+	49659500	49659632	True	NM_001008223,NM_032704	chr12,chr12	-,+	C1QL4,TUBA1C	71391,-686
chr14:23770148-23770351	chr14	+	23770153	23770387	True	NM_001199864,NM_001199839,NM_004050,NR_026862	chr14,chr14,chr14,chr14	+,+,+,-	BCL2L2-PABPN1,BCL2L2,BCL2L2,PPP1R3E	5583,5681,5583,1720
chr3:148942227-148943929	chr3	+	148942368	148943834	True	NM_000096,NM_032383	chr3,chr3	-,+	CP,HPS3	-2536,-95048
chr2:131101755-131102350	chr2	+	131102033	131102307	True	NM_033416,NM_032357	chr2,chr2	+,-	IMP4,CCDC115	-1596,-2111
chr10:90706670-90708622	chr10	+	90707152	90708593	True	NM_001613,NM_000043	chr10,chr10	-,+	ACTA2,FAS	4037,41694
chr1:12776439-12776901	chr1	+	12776461	12776919	True	NM_004753,NM_001103169,NM_001103170	chr1,chr1,chr1	-,+,+	DHRS3,AADACL3,AADACL3	-98641,-395,-395
chr17:3341084-3341645	chr17	+	3341121	3341686	True	NM_012373,NM_003554	chr17,chr17	+,-	OR3A3,OR1E2	-17319,-3986
chr11:27376581-27377856	chr11	+	27376606	27377488	True	NR_002832,NM_080654,NM_030771	chr11,chr11,chr11	+,-,-	BDNF-AS1,CCDC34,CCDC34	150910,7357,7357
chr17:4901791-4902279	chr17	+	4901939	4902211	True	NM_001167986,NM_001167987,NM_006612,NM_001167985,NM_213726	chr17,chr17,chr17,chr17,chr17	-,-,+,-,-	INCA1,INCA1,KIF1C,INCA1,INCA1	-1034,-1034,-747,-1034,-1034
chr12:57609683-57609975	chr12	+	57609848	57609908	True	NM_020142,NM_007224	chr12,chr12	-,+	NDUFA4L2,NXPH4	24617,669
chr8:61428907-61429295	chr8	+	61428978	61429085	True	NM_002865,NM_004056	chr8,chr8	+,-	RAB2A,CA8	473,-235024
chr7:105223117-105223554	chr7	+	105223232	105223534	True	NR_027068,NM_021930	chr7,chr7	-,+	EFCAB10,RINT1	-1256,-50753
chr21:30397655-30398631	chr21	+	30397676	30398411	True	NM_016940,NM_001001992,NM_001032410,NM_006447	chr21,chr21,chr21,chr21	-,+,+,+	RWDD2B,USP16,USP16,USP16	-5991,-796,-796,-796
chr16:21611608-21611981	chr16	+	21611652	21611998	True	NM_001077180,NM_016025,NM_005849	chr16,chr16,chr16	+,+,-	METTL9,METTL9,IGSF6	-847,-847,52024
chr4:37455619-37456147	chr4	+	37455810	37456033	True	NM_001104629,NM_001085399	chr4,chr4	+,-	C4orf19,RELL1	-314,232021
chr11:7694482-7694713	chr11	+	7694493	7694745	True	NM_003621,NM_016229	chr11,chr11	+,-	PPFIBP2,CYB5R2	-159543,126
chr12:56413185-56414506	chr12	+	56413270	56414388	True	NM_006928,NM_022465	chr12,chr12	-,+	PMEL,IKZF4	-52774,300
chr3:9933406-9933791	chr3	+	9933455	9933667	True	NM_001199552,NM_032492	chr3,chr3	-,+	CIDEC,JAGN1	-11517,-1235
chr2:111876006-111876247	chr2	+	111876010	111876274	True	NM_138624,NR_015395,NM_138623,NM_001204106,NM_207003,NM_006538,NM_207002,NM_001204107,NM_001204113,NM_001204112,NM_001204111,NM_001204110,NM_138627,NM_138626,NM_138625,NM_138622,NM_001204108,NM_001204109,NM_138621	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,-,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+	BCL2L11,LOC541471,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11,BCL2L11	2216,376468,2216,2216,2216,2216,2216,2216,2216,2216,2216,2216,2216,2216,2216,2216,2216,2216,2216
chr19:14179156-14180841	chr19	+	14179372	14180835	True	NR_024282,NM_001145028	chr19,chr19	+,-	LOC113230,PALM3	2985,-9401
chr20:56194381-56194983	chr20	+	56194504	56194740	True	NM_030776,NM_001160417,NM_001160419,NM_001160418,NM_002591	chr20,chr20,chr20,chr20,chr20	-,-,-,-,+	ZBP1,ZBP1,ZBP1,ZBP1,PCK1	942,942,942,942,-58418
chr13:111603297-111603693	chr13	+	111603353	111603647	True	NM_017664,NM_001113511	chr13,chr13	-,+	ANKRD10,ARHGEF7	-35937,163976
chr18:65183357-65183798	chr18	+	65183357	65183837	True	NM_032160,NR_033921	chr18,chr18	-,+	DSEL,LOC643542	180,-55
chr7:151513818-151515604	chr7	+	151513996	151515560	True	NM_145292,NM_001040633	chr7,chr7	+,-	GALNTL5,PRKAG2	137903,-2039
chr6:155055978-155056738	chr6	+	155056383	155056546	True	NM_173515,NM_014892	chr6,chr6	-,+	CNKSR3,SCAF8	-224630,-1926
chr7:132259221-132259479	chr7	+	132259323	132259473	True	NM_001037126,NM_001105543,NM_020911	chr7,chr7,chr7	+,-,-	EXOC4,PLXNA4,PLXNA4	678349,1900,1900
chr2:101034570-101035302	chr2	+	101034586	101035258	True	NM_004854,NM_001011717	chr2,chr2	-,+	CHST10,NMS	-456,51685
chr9:37113931-37115769	chr9	+	37114084	37115532	True	NM_016734,NM_032226	chr9,chr9	-,+	PAX5,ZCCHC7	-79608,4936
chr5:31193389-31193906	chr5	+	31193405	31193721	True	NM_004932,NM_001100412	chr5,chr5	+,-	CDH6,DROSHA	74,338611
chr5:141307656-141309246	chr5	+	141307660	141309165	True	NM_016580,NM_014773,NM_001142603	chr5,chr5,chr5	-,+,+	PCDH12,KIAA0141,KIAA0141	29512,-4326,-4326
chr11:45113803-45114840	chr11	+	45113965	45114878	True	NM_006034,NM_020229	chr11,chr11	-,+	TP53I11,PRDM11	-141357,685
chr6:97284585-97284805	chr6	+	97284637	97284737	True	NM_052904,NM_030784,NM_001143957	chr6,chr6,chr6	+,-,-	KLHL32,GPR63,GPR63	87758,666,666
chr20:55903053-55904826	chr20	+	55903140	55904649	True	NM_198265,NM_012444,NR_036219	chr20,chr20,chr20	+,+,-	SPO11,SPO11,MIR4325	181,181,-6493
chr10:1069135-1070428	chr10	+	1069620	1070476	True	NM_033261,NR_024628,NR_024629,NR_027708,NR_027709	chr10,chr10,chr10,chr10,chr10	-,+,+,+,+	IDI2,IDI2-AS1,IDI2-AS1,IDI2-AS1,IDI2-AS1	1373,-1100,-1100,-1100,-1100
chr14:105268738-105269036	chr14	+	105268743	105268983	True	NM_005163,NM_001137601,NM_001014431,NM_001014432	chr14,chr14,chr14,chr14	-,+,-,-	AKT1,ZBTB42,AKT1,AKT1	-8805,-1861,-6663,-6663
chrX:49644007-49644292	chrX	+	49644110	49644340	True	NM_001145073,NR_026742	chrX,chrX	+,-	USP27X,LOC158572	129,-151
chr18:2659157-2660246	chr18	+	2659471	2659925	True	NR_033754,NM_015295	chr18,chr18	-,+	LOC645158,SMCHD1	-6240,-3636
chr15:66547366-66547711	chr15	+	66547476	66547732	True	NM_133375,NM_032445	chr15,chr15	+,-	DIS3L,MEGF11	37900,-1401
chr2:107078630-107079786	chr2	+	107078831	107079599	True	NM_001144013,NR_003506	chr2,chr2	-,+	RGPD3,PLGLA	5258,-76115
chr2:107078630-107079786	chr2	-	108449941	108450017	False	NM_182588,NR_024439	chr2,chr2	+,-	RGPD4,LOC729121	-6614,-7358
chr5:5139178-5139687	chr5	+	5139417	5139575	True	NM_139056,NR_028351	chr5,chr5	+,-	ADAMTS16,FLJ33360	867,1197880
chr6:158590188-158592033	chr6	+	158591191	158591901	True	NM_207118,NM_032861	chr6,chr6	+,-	GTF2H5,SERAC1	-1864,-1879
chr9:132807138-132808572	chr9	+	132807284	132808512	True	NM_001136557,NM_001136558,NM_020960,NM_015033	chr9,chr9,chr9,chr9	+,+,+,-	GPR107,GPR107,GPR107,FNBP1	7472,7472,7472,-1811
chr6:112669098-112670483	chr6	+	112669377	112670464	True	NM_001105209,NM_001013734	chr6,chr6	-,+	LAMA4,RFPL4B	-93549,-902
chr5:89825594-89827112	chr5	+	89825869	89827129	True	NM_198273,NM_032119	chr5,chr5	-,+	LYSMD3,GPR98	-468,27487
chr9:212187-213819	chr9	+	212289	213662	True	NM_203447,NM_152569	chr9,chr9	+,-	DOCK8,C9orf66	1202,2281
chr3:49207706-49208634	chr3	+	49207793	49208565	True	NM_173546,NM_022903	chr3,chr3	+,-	KLHDC8B,CCDC71	452,-4008
chr16:66463804-66465089	chr16	+	66463925	66464773	True	NM_001172643,NM_001136106,NM_001197224,NM_001178020,NM_001197225	chr16,chr16,chr16,chr16,chr16	-,+,+,+,+	TK2,BEAN1,BEAN1,BEAN1,BEAN1	119471,-3160,-3160,-3160,-3160
chr19:49109885-49110176	chr19	+	49109967	49110177	True	NM_017708,NM_133498	chr19,chr19	-,+	FAM83E,SPACA4	6567,-18
chr7:100184065-100184337	chr7	+	100184133	100184323	True	NM_033506,NM_002319,NM_001163499,NM_012172	chr7,chr7,chr7,chr7	+,-,+,+	FBXO24,LRCH4,FBXO24,FBXO24	-228,-357,2872,2872
chr8:22294449-22296130	chr8	+	22294766	22295907	True	NM_005605,NR_029714	chr8,chr8	+,-	PPP3CC,MIR320A	2688,-192210
chr14:68139318-68140441	chr14	+	68139449	68140470	True	NM_006370,NM_152443	chr14,chr14	-,+	VTI1B,RDH12	1184,28132
chr2:28973750-28974147	chr2	+	28973749	28974121	True	NM_206876,NM_017910,NM_002709	chr2,chr2,chr2	+,-,+	PPP1CB,TRMT61B,PPP1CB	492,119104,504
chr2:71165243-71165661	chr2	+	71165289	71165653	True	NM_144582,NM_001692	chr2,chr2	-,+	TEX261,ATP6V1B1	56398,-2342
chr6:6615174-6616518	chr6	+	6615178	6616557	True	NM_004271,NR_026970	chr6,chr6	+,-	LY86,LY86-AS1	-26295,6552
chr11:3520746-3521772	chr11	+	3520833	3521643	True	NM_007152,NR_024248	chr11,chr11	-,+	ZNF195,LOC650368	-120385,-118701
chr17:42091446-42091912	chr17	+	42091465	42091913	True	NM_004160,NM_032376,NM_153006	chr17,chr17,chr17	-,-,+	PYY,TMEM101,NAGS	-9628,482,-9484
chr11:107992500-107992710	chr11	+	107992550	107992680	True	NM_000019,NM_002519	chr11,chr11	+,-	ACAT1,NPAT	-343,100735
chr22:35696647-35697074	chr22	+	35696688	35696893	True	NM_001135729,NM_005368,NM_001135732,NM_001135730,NM_005488,NR_024194,NR_024195	chr22,chr22,chr22,chr22,chr22,chr22,chr22	+,-,+,+,+,+,+	TOM1,MB,TOM1,TOM1,TOM1,TOM1,TOM1	-1471,316550,-942,-942,-942,-942,-942
chr3:125597741-125599149	chr3	+	125598068	125599192	True	NM_001015050,NR_024250	chr3,chr3	-,+	ALG1L,LOC100125556	56745,36251
chr22:37823917-37824431	chr22	+	37824115	37824321	True	NM_152243,NM_052906	chr22,chr22	+,-	CDC42EP1,ELFN2	132149,-610
chr18:22931060-22931432	chr18	+	22931248	22931351	True	NM_015461,NM_001025096	chr18,chr18	-,+	ZNF521,PSMA8	920,782464
chr1:150483451-150483694	chr1	+	150483486	150483692	True	NM_004425,NM_001202858,NM_001197320,NM_022664	chr1,chr1,chr1,chr1	+,+,-,+	ECM1,ECM1,MCL1,ECM1	-3050,-3050,68572,-3050
chr9:34591039-34591279	chr9	+	34591047	34591231	True	NR_024369,NM_001842,NM_147164	chr9,chr9,chr9	+,-,-	LOC415056,CNTFR,CNTFR	-23088,-1325,-1325
chr20:48532877-48533078	chr20	+	48532992	48533069	True	NM_006038,NM_001135773,NM_018683	chr20,chr20,chr20	-,-,+	SPATA2,SPATA2,RNF114	-912,-2716,19844
chr1:153889040-153889375	chr1	+	153889039	153889277	True	NM_130898,NM_020699	chr1,chr1	+,-	CREB3L4,GATAD2B	51119,6232
chr17:9929885-9930366	chr17	+	9930012	9930350	True	NM_004246,NM_201432,NM_001130831	chr17,chr17,chr17	+,-,-	GLP2R,GAS7,GAS7	-200682,9764,-389
chr1:155905461-155906551	chr1	+	155905726	155906288	True	NM_014949,NR_003005,NM_181885	chr1,chr1,chr1	-,-,+	KIAA0907,SCARNA4,RXFP4	-1538,-9849,5191
chr7:86314119-86314942	chr7	+	86314200	86314907	True	NM_152748,NM_000840	chr7,chr7	-,+	KIAA1324L,GRM3	280435,-41038
chr20:5297973-5299006	chr20	+	5298000	5298825	True	NM_144773,NR_029405	chr20,chr20	-,+	PROKR2,LOC643406	-2985,153016
chr22:17649349-17650929	chr22	+	17649551	17650867	True	NM_033070,NM_017829,NR_024482,NR_024483	chr22,chr22,chr22,chr22	-,-,+,+	CECR5,CECR5,CECR4,CECR4	-9382,-3374,-9323,-9323
chrX:67909257-67910027	chrX	+	67909289	67910011	True	NM_001142504,NM_002547	chrX,chrX	+,-	STARD8,OPHN1	3470,-255990
chr2:219825157-219825608	chr2	+	219825219	219825651	True	NM_003936,NM_017521	chr2,chr2	+,-	CDK5R2,FEV	-872,24778
chr12:15712665-15713360	chr12	+	15712699	15713394	True	NM_004447,NM_030671	chr12,chr12	-,+	EPS8,PTPRO	229167,-13475
chr9:139872979-139873340	chr9	+	139873057	139873389	True	NM_000954,NM_004669,NM_207510	chr9,chr9,chr9	+,-,+	PTGDS,CLIC3,LCNL1	-1152,17685,4055
chr11:56949286-56949527	chr11	+	56949327	56949471	True	NM_001005210,NM_005161	chr11,chr11	+,-	LRRC55,APLNR	-157,55506
chr19:59067536-59069441	chr19	+	59067660	59069425	True	NM_198426,NR_027334,NM_003969,NM_014453	chr19,chr19,chr19,chr19	-,+,-,-	CHMP2A,LOC100131691,UBE2M,CHMP2A	-1305,1127,968,-1174
chr1:44484188-44485266	chr1	+	44484691	44485089	True	NM_152499,NM_006934,NM_201649	chr1,chr1,chr1	+,-,-	CCDC24,SLC6A9,SLC6A9	-27471,-1694,-1694
chr13:78124596-78125303	chr13	+	78124847	78125289	True	NM_144777,NR_037438	chr13,chr13	+,-	SCEL,MIR3665	-15091,147012
chr8:145133894-145134478	chr8	+	145133913	145134319	True	NM_003801,NM_017570,NM_019037	chr8,chr8,chr8	+,-,+	GPAA1,OPLAH,EXOSC4	3204,-18329,-442
chr16:19077548-19078256	chr16	+	19077705	19078299	True	NM_015092,NM_001190983,NM_016138	chr16,chr16,chr16	-,+,+	SMG1,COQ7,COQ7	-139979,939,617
chr22:19939080-19940017	chr22	+	19939083	19939559	True	NM_001135162,NM_001135161,NM_000754,NM_006440	chr22,chr22,chr22,chr22	+,+,+,-	COMT,COMT,COMT,TXNRD2	-89,-674,-9871,-9724
chr14:70346370-70346857	chr14	+	70346575	70346885	True	NM_001034852,NM_003049,NM_022137	chr14,chr14,chr14	+,-,+	SMOC1,SLC10A1,SMOC1	-512,-82569,-512
chr8:29120687-29121008	chr8	+	29120778	29121050	True	NM_015254,NM_024567	chr8,chr8	-,+	KIF13B,HMBOX1	-168,-372606
chr22:50690527-50691283	chr22	+	50690560	50691331	True	NM_032019,NM_002969,NM_031454,NM_020461,NM_001159286	chr22,chr22,chr22,chr22,chr22	-,-,+,-,-	HDAC10,MAPK12,SELO,TUBGCP6,HDAC10	-726,8808,-51203,-7160,-726
chr2:42795652-42795902	chr2	+	42795874	42795944	True	NM_172344,NM_020744	chr2,chr2	-,+	KCNG3,MTA3	-74637,-254
chr2:110767685-110767905	chr2	+	110767689	110767805	True	NR_037627,NR_036225	chr2,chr2	+,-	LOC100288570,MIR4267	-62473,59864
chr2:110767685-110767905	chr2	-	111118739	111118855	False	NR_037626,NR_027244	chr2,chr2	+,-	LOC100507334,LOC151009	-115575,23308
chr6:10551817-10552394	chr6	+	10552280	10552394	True	NR_027793,NM_001491	chr6,chr6	-,+	C6orf218,GCNT2	-117225,3554
chr20:37436225-37437598	chr20	+	37436468	37437383	True	NM_001172735,NR_027241,NM_015568	chr20,chr20,chr20	+,-,+	PPP1R16B,LOC388796,PPP1R16B	-2171,-372450,-2171
chr22:20612436-20613683	chr22	+	20612440	20613322	True	NM_015672,NM_003426	chr22,chr22	-,+	RIMBP3,ZNF74	-150654,135157
chr22:20612436-20613683	chr22	+	25021045	25021857	False	NM_207644,NR_024494	chr22,chr22	-,+	C22orf36,BCRP3	-32010,7024
chr22:20612436-20613683	chr22	-	21565380	21566191	False	NR_024583,NR_002829	chr22,chr22	+,-	POM121L8P,P2RX6P	70522,-166842
chr22:20612436-20613683	chr22	-	18764198	18765080	False	NM_005675,NR_003267	chr22,chr22	+,-	DGCR6,GGT3P	128655,14445
chr20:44509640-44509999	chr20	+	44509733	44509971	True	NM_080749,NM_080608,NM_001167594,NM_080603,NM_000308,NM_001127695	chr20,chr20,chr20,chr20,chr20,chr20	-,-,+,+,+,+	NEURL2,C20orf165,CTSA,ZSWIM1,CTSA,CTSA	9980,6317,9619,12,9619,9619
chr20:4230372-4231039	chr20	+	4230591	4230930	True	NM_000678,NR_033917	chr20,chr20	-,+	ADRA1D,LOC728228	-932,-56905
chr3:133121575-133123357	chr3	+	133121796	133123386	True	NM_003571,NM_007027	chr3,chr3	+,-	BFSP2,TOPBP1	-3069,257401
chr15:96865956-96866166	chr15	+	96865995	96866137	True	NM_001145156,NM_001145155,NR_034095,NM_021005	chr15,chr15,chr15,chr15	+,+,-,+	NR2F2,NR2F2,LOC400456,NR2F2	9656,3019,-995666,7973
chr15:89163933-89164304	chr15	+	89163956	89164264	True	NM_022767,NR_029606,NR_026645	chr15,chr15,chr15	+,+,-	AEN,MIR7-2,DET1	262,-8960,-74044
chr2:107487178-107489148	chr2	+	107487263	107489013	True	NR_003506,NM_001142351	chr2,chr2	+,-	PLGLA,ST6GAL2	-484552,13647
chr7:139209054-139209436	chr7	+	139209110	139209260	True	NM_001080511,NM_198508	chr7,chr7	+,-	CLEC2L,KLRG2	-487,-40653
chr9:140082080-140082504	chr9	+	140082109	140082461	True	NM_003731,NM_013366	chr9,chr9	+,-	SSNA1,ANAPC2	592,646
chr19:50353877-50354133	chr19	+	50353942	50354134	True	NM_017432,NM_007254	chr19,chr19	+,-	PTOV1,PNKP	281,16738
chr15:63343492-63344644	chr15	+	63343553	63344414	True	NM_001018006,NM_001018007,NM_001018004,NM_001018005,NM_001018008,NM_000366,NM_001018020,NM_015920	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,-	TPM1,TPM1,TPM1,TPM1,TPM1,TPM1,TPM1,RPS27L	-8767,-8767,-8767,-8767,-2969,-8767,-8767,105377
chr11:66187607-66187810	chr11	+	66187684	66187822	True	NM_178864,NM_016050	chr11,chr11	+,-	NPAS4,MRPL11	652,18538
chr3:52930675-52931251	chr3	+	52930810	52931098	True	NM_001198974,NM_198563,NM_002217	chr3,chr3,chr3	-,-,+	TMEM110-MUSTN1,TMEM110,ITIH3	549,549,-102077
chr14:72017675-72019154	chr14	+	72017949	72018539	True	NM_015556,NM_033141	chr14,chr14	+,-	SIPA1L1,MAP3K9	-21959,-742061
chr1:85564230-85565372	chr1	+	85564306	85564883	True	NM_145172,NM_018298	chr1,chr1	+,-	WDR63,MCOLN3	-36376,-50137
chr20:45987430-45989018	chr20	+	45987436	45989030	True	NM_183048,NR_024594,NM_012408,NM_183047	chr20,chr20,chr20,chr20	-,+,-,-	ZMYND8,LOC100131496,ZMYND8,ZMYND8	-1962,-40241,-1962,-1962
chr10:27148734-27149054	chr10	+	27148735	27149030	True	NM_001178119,NM_005470,NM_001178116,NM_001178120,NM_001178121,NM_001178122,NM_001178123,NM_001178124,NM_001178125,NM_014317,NM_001012750,NM_001012751,NM_001012752	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,-,-,-,-,-,+,-,-,-	ABI1,ABI1,ABI1,ABI1,ABI1,ABI1,ABI1,ABI1,ABI1,PDSS1,ABI1,ABI1,ABI1	1040,1040,1040,1040,1040,1040,1040,1040,1040,-162198,1040,1040,1040
chr11:64050457-64051400	chr11	+	64050570	64051250	True	NM_020155,NM_001170881,NM_001170880,NM_004322,NM_001177358,NM_001170726,NM_033310,NM_032989	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,-,+,+,+,-	GPR137,GPR137,GPR137,BAD,GPR137,GPR137,KCNK4,BAD	2331,1034,2331,976,1032,560,7542,976
chr7:2557814-2558417	chr7	+	2557880	2558382	True	NM_002304,NM_001040167,NM_001040168,NM_001166355,NM_152743	chr7,chr7,chr7,chr7,chr7	+,+,+,+,-	LFNG,LFNG,LFNG,LFNG,BRAT1	-434,1096,1096,-5768,37060
chr1:100598936-100599322	chr1	+	100598993	100599295	True	NM_019083,NM_194292	chr1,chr1	+,-	CCDC76,SASS6	-339,-482
chr12:53192255-53194035	chr12	+	53192551	53194005	True	NM_199187,NM_057088	chr12,chr12	+,-	KRT18,KRT3	148649,-2659
chr2:107140796-107141198	chr2	+	107140912	107141224	True	NM_001144013,NR_003506	chr2,chr2	-,+	RGPD3,PLGLA	-56111,-138194
chr1:47802876-47803443	chr1	+	47803051	47803289	True	NM_001136140,NM_003035,NM_016308	chr1,chr1,chr1	+,-,+	CMPK1,STIL,CMPK1	-3645,-23232,-3645
chr13:70641614-70642327	chr13	+	70641614	70642073	True	NR_002717,NM_020866	chr13,chr13	+,-	ATXN8OS,KLHL1	39271,40611
chr22:39714479-39714948	chr22	+	39714680	39714984	True	NM_001033853,NM_000967,NR_000028,NR_002439,NR_000026,NR_000027,NM_145731	chr22,chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,-,-,+	RPL3,RPL3,SNORD83B,SNORD43,RNU86,SNORD83A,SYNGR1	736,736,-4764,184,-1779,-3368,30969
chr12:89767383-89768125	chr12	+	89767486	89768132	True	NR_028138,NM_022652	chr12,chr12	+,-	LOC338758,DUSP6	334599,-21190
chr22:41957624-41957837	chr22	+	41957632	41957754	True	NM_001018052,NM_014460	chr22,chr22	-,+	POLR3H,CSDC2	-17153,-669
chr6:7728925-7729321	chr6	+	7729050	7729274	True	NM_001145549,NM_001718	chr6,chr6	-,+	TXNDC5,BMP6	181086,-2092
chr10:22605754-22606090	chr10	+	22605779	22606129	True	NM_001204062,NM_001199938,NM_012071,NM_005180	chr10,chr10,chr10,chr10	+,-,+,+	COMMD3-BMI1,EBLN1,COMMD3,BMI1	-518,-106867,-518,4009
chr15:22556349-22556719	chr16	-	87515245	87515309	False	NM_022818,NM_015144	chr16,chr16	+,-	MAP1LC3B,ZCCHC14	-89495,10209
chr15:22556349-22556719	chr15	+	22556422	22556720	True	NR_027407,NR_033735	chr15,chr15	-,+	GOLGA8DP,REREP3	159058,-9908
chr18:29263581-29264002	chr18	+	29263653	29264041	True	NM_004775,NM_000371	chr18,chr18	-,+	B4GALT6,TTR	695,-91978
chr13:43141050-43142737	chr13	+	43141516	43142763	True	NM_033012,NM_003701,NM_001002264	chr13,chr13,chr13	+,+,-	TNFSF11,TNFSF11,EPSTI1	-4708,5527,423664
chr6:43611382-43612875	chr6	+	43611430	43612840	True	NM_014628,NM_152732,NM_019096,NM_001193341	chr6,chr6,chr6,chr6	+,+,-,+	MAD2L1BP,RSPH9,GTPBP2,RSPH9	-7904,-74,-14494,-74
chr8:103252002-103253091	chr8	+	103252028	103253074	True	NM_015713,NM_001172477,NM_001172478,NM_024410	chr8,chr8,chr8,chr8	-,-,-,+	RRM2B,RRM2B,RRM2B,ODF1	-682,-969,-682,310773
chr2:113671619-113673593	chr2	+	113671877	113673201	True	NM_173204,NM_173205,NM_173202,NM_173203,NM_000576,NM_014439	chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,-,+	IL1F7,IL1F7,IL1F7,IL1F7,IL1B,IL1F7	-1380,-6,-1380,-1380,-77521,-1380
chr11:60408432-60409246	chr11	+	60408510	60409032	True	NR_026946,NM_004778	chr11,chr11	+,-	C11orf64,GPR44	-25345,214470
chr16:8713499-8713931	chr16	+	8713528	8713931	True	NM_001146336,NM_024109	chr16,chr16	-,+	TMEM114,METTL22	-91302,1595
chr15:25302116-25302854	chr15	+	25302169	25302891	True	NR_003317,NR_003322,NR_003320,NR_003321,NR_003324,NR_003316,NR_003319,NR_003318,NM_130838	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,-	SNORD116-2,SNORD116-7,SNORD116-5,SNORD116-6,SNORD116-9,SNORD116-1,SNORD116-4,SNORD116-3,UBE3A	-2864,4587,4587,7280,-214,-5597,1792,-214,347812
chr17:39306238-39306718	chr17	+	39306273	39306736	True	NM_033188,NM_030976,NM_001190460	chr17,chr17,chr17	-,-,+	KRTAP4-5,KRTAP4-6,KRTAP9-1	-219,-9534,39402
chr9:130699466-130700043	chr9	+	130699471	130699939	True	NM_001135219,NM_173492,NM_003863,NM_001006641	chr9,chr9,chr9,chr9	-,-,-,+	PIP5KL1,PIP5KL1,DPM2,SLC25A25	-6395,-9701,874,130539
chr1:81674451-81675254	chr1	+	81674553	81675272	True	NM_022159,NM_012302	chr1,chr1	-,+	ELTD1,LPHN2	-2202058,590809
chr10:64322981-64323722	chr10	+	64323216	64323760	True	NM_000399,NM_199452	chr10,chr10	-,+	EGR2,ZNF365	252416,-43060
chr12:77378658-77380269	chr12	+	77379113	77380146	True	NM_203394,NM_015336	chr12,chr12	-,+	E2F7,ZDHHC17	79271,-221310
chr3:102150516-102152149	chr3	+	102150866	102152168	True	NM_000986,NM_175056	chr3,chr3	-,+	RPL24,ZPLD1	-745303,1690
chr6:170095986-170096730	chr6	+	170096250	170096625	True	NM_182552,NM_001202550,NM_001029863	chr6,chr6,chr6	-,-,+	WDR27,WDR27,C6orf120	5585,5585,5631
chr6:41164153-41165626	chr6	+	41164689	41165481	True	NM_024807,NM_198153	chr6,chr6	-,+	TREML2,TREML4	3506,30580
chr4:134072179-134072412	chr4	+	134072225	134072397	True	NM_032961,NM_001114734,NM_020815	chr4,chr4,chr4	+,-,+	PCDH10,PABPC4L,PCDH10	-1806,1050556,-1806
chr17:12700004-12700921	chr17	+	12700237	12700960	True	NM_014859,NM_001165962	chr17,chr17	+,-	ARHGAP44,ELAC2	-7466,220471
chr2:129275590-129276685	chr2	+	129275918	129276510	True	NM_004807,NR_027671	chr2,chr2	-,+	HS6ST1,UGGT1	-199747,-427188
chr14:103766710-103768016	chr14	+	103766937	103767849	True	NR_033938,NM_001969	chr14,chr14	-,+	LOC100131366,EIF5	-111572,32643
chr15:34516885-34517146	chr15	+	34516964	34517181	True	NM_024713,NM_016454	chr15,chr15	-,+	C15orf29,TMEM85	-14667,63
chr17:7577536-7577835	chr17	+	7577537	7577623	True	NM_001126116,NM_001126117,NM_001126115,NM_001143990	chr17,chr17,chr17,chr17	-,-,-,+	TP53,TP53,TP53,WRAP53	1238,1238,1238,11765
chr16:3087107-3087675	chr16	+	3087125	3087591	True	NM_001103175,NM_022468	chr16,chr16	-,+	CCDC64B,MMP25	-1583,9090
chr4:156879698-156880859	chr4	+	156879796	156880634	True	NM_005651,NM_001334	chr4,chr4	+,-	TDO2,CTSO	-55001,-4748
chr2:33671930-33672785	chr2	+	33672236	33672832	True	NM_015475,NM_170672	chr2,chr2	-,+	FAM98A,RASGRP3	151580,-10872
chr9:80909932-80910289	chr9	+	80910015	80910283	True	NM_002072,NM_021154,NM_058179	chr9,chr9,chr9	-,+,+	GNAQ,PSAT1,PSAT1	-263796,1775,1775
chr3:48756314-48756712	chr3	+	48756318	48756443	True	NM_001005910,NM_001005911,NR_027437,NR_027438,NM_001146178,NM_001146179,NM_006321,NM_001190317,NM_001190316,NM_001005909,NM_016291	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,-,-,+,-,-,-,-	IP6K2,IP6K2,IP6K2,IP6K2,IP6K2,IP6K2,ARIH2,IP6K2,IP6K2,IP6K2,IP6K2	-1607,-1607,-1607,-1607,-1607,-1607,199837,-1607,-1607,-1607,-1607
chr10:103601310-103602131	chr10	+	103601312	103602168	True	NM_024747,NM_173195,NM_173191,NM_173192,NM_173193,NM_173194,NM_014591,NM_173197	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,-,-,-,-,-,-,-	HPS6,KCNIP2,KCNIP2,KCNIP2,KCNIP2,KCNIP2,KCNIP2,KCNIP2	222955,1559,1559,1559,1559,-1701,1559,1559
chr16:29478728-29479579	chr16	+	29479029	29479465	True	NR_002556,NR_002557,NM_001017390,NM_177552	chr16,chr16,chr16,chr16	-,-,+,+	LOC388242,LOC613038,SULT1A4,SULT1A3	-130,-130,-7873,-7873
chr16:29478728-29479579	chr16	+	30218378	30218811	False	NR_002556,NR_002557,NM_001017390,NM_177552	chr16,chr16,chr16,chr16	-,-,+,+	LOC388242,LOC613038,SULT1A4,SULT1A3	-130,-130,-7880,-7880
chr1:31460202-31461517	chr1	+	31460410	31461484	True	NR_002762,NR_003066	chr1,chr1	+,-	PRO0611,SNORD85	-87,-19326
chr10:60344154-60344873	chr10	+	60344200	60344848	True	NM_001080512,NM_152230	chr10,chr10	+,-	BICC1,IPMK	-71347,-316506
chr14:52327460-52327835	chr14	+	52327468	52327802	True	NM_007361,NM_053064	chr14,chr14	-,+	NID2,GNG2	208194,-469
chr20:62370135-62370342	chr20	+	62370236	62370298	True	NM_020062,NM_003224,NM_017806	chr20,chr20,chr20	+,-,+	SLC2A4RG,ARFRP1,LIME1	912,-30881,-2309
chr3:235721-237510	chr3	+	235848	237509	True	NM_000564,NM_006614	chr3,chr3	-,+	IL5RA,CHL1	2914606,1140
chr10:114614268-114614672	chr10	+	114614278	114614556	True	NM_022494,NR_015409	chr10,chr10	-,+	ZDHHC6,LOC143188	-407606,-3656
chr7:14850527-14850963	chr7	+	14850575	14850826	True	NM_001195280,NM_004080	chr7,chr7	+,-	LOC100506049,DGKB	1715678,30314
chr19:17414224-17414483	chr19	+	17414248	17414364	True	NM_024050,NM_024527,NM_023937	chr19,chr19,chr19	+,-,+	DDA1,ABHD8,MRPL34	5972,2,2112
chr3:167812858-167813203	chr3	+	167812863	167813077	True	NM_014498,NR_021485	chr3,chr3	-,+	GOLIM4,EGFEM1P	390,154232
chrX:150884821-150885558	chrX	+	150884964	150885574	True	NR_029973,NM_033085	chrX,chrX	-,+	MIR452,FATE1	242660,-514
chr2:216880613-216881777	chr2	+	216880686	216881750	True	NM_018000,NM_001142310	chr2,chr2	-,+	MREG,TMEM169	-2340,64838
chrX:69281622-69282101	chrX	+	69281792	69282080	True	NM_001002254,NM_207320	chrX,chrX	-,+	AWAT2,OTUD6A	-12004,260
chr14:71109843-71111232	chr14	+	71109867	71111281	True	NM_015351,NM_005466	chr14,chr14	+,-	TTC9,MED6	-1414,-42483
chr2:176963591-176964064	chr2	+	176963685	176964113	True	NM_001080458,NM_000523,NM_021192,NM_021193	chr2,chr2,chr2,chr2	-,+,+,+	EVX2,HOXD13,HOXD11,HOXD12	-14995,-6204,7970,416
chr10:1572595-1573955	chr10	+	1572813	1573737	True	NR_033387,NM_018702	chr10,chr10	+,-	NCRNA00168,ADARB2	-4039,206031
chr12:5502470-5503054	chr12	+	5502562	5503027	True	NM_020373,NM_001102654	chr12,chr12	-,+	ANO2,NTF3	552422,38252
chr3:141456303-141457051	chr3	+	141456302	141456898	True	NM_001201370,NM_183237,NR_037703,NR_037702,NM_001178140,NM_014245	chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,-,+	RNF7,RNF7,RNF7,RNF7,TFDP2,RNF7	152,152,152,152,262381,152
chr15:83479582-83481071	chr15	+	83479581	83480900	True	NM_001007122,NM_001080435	chr15,chr15	-,+	FSD2,WHAMM	-4775,-1659
chr6:56040860-56042447	chr6	+	56040985	56042321	True	NM_152731,NM_030820	chr6,chr6	+,-	BEND6,COL21A1	777451,70118
chr9:129681241-129683173	chr9	+	129681274	129683137	True	NM_001190729,NM_001190730,NM_012098,NM_014636	chr9,chr9,chr9,chr9	+,+,-,+	RALGPS1,RALGPS1,ANGPTL2,RALGPS1	-4278,-4278,201957,-4278
chr2:202500407-202502321	chr2	+	202500742	202502001	True	NM_152388,NM_001044385,NM_139158	chr2,chr2,chr2	-,-,+	ALS2CR4,ALS2CR4,CDK15	5469,6283,169196
chr1:2487385-2487662	chr1	+	2487520	2487604	True	NR_037844,NR_026927,NM_003820	chr1,chr1,chr1	-,-,+	LOC100133445,LOC115110,TNFRSF14	896,-3236,200
chr19:472406-472622	chr19	+	472409	472493	True	NM_182577,NM_130760	chr19,chr19	-,+	ODF3L2,MADCAM1	2540,23996
chr19:36304776-36305305	chr19	+	36305014	36305126	True	NM_052948,NM_021232	chr19,chr19	+,-	ARHGAP33,PRODH2	-38652,-813
chr20:44036981-44037517	chr20	+	44037051	44037513	True	NM_015937,NM_001184730,NM_001197140,NM_014477,NM_001184729,NM_001184728,NM_001197139,NM_001048226,NM_001048225,NM_001048224,NM_001048223,NM_001048222,NM_001048221,NM_018478	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,+,+,-,+,+,+,+,+,+,+,+,+,+	PIGT,PIGT,DBNDD2,TP53TG5,PIGT,PIGT,DBNDD2,DBNDD2,DBNDD2,DBNDD2,DBNDD2,DBNDD2,DBNDD2,DBNDD2	7193,7193,-2281,-30094,7193,7193,-2469,-473,-473,-1874,-1874,-2447,-2447,-2241
chr12:118539475-118540532	chr12	+	118539606	118540547	True	NM_002567,NM_019086	chr12,chr12	+,-	PEBP1,VSIG10	33322,1313
chr9:35535830-35536664	chr9	+	35535851	35536515	True	NM_001099951,NM_001135999	chr9,chr9	-,+	FAM166B,RUSC2	27431,2113
chr17:65371800-65372620	chr17	+	65371943	65372603	True	NM_002816,NM_181671,NM_012417,NM_174871	chr17,chr17,chr17,chr17	-,+,+,-	PSMD12,PITPNC1,PITPNC1,PSMD12	-9222,1320,1320,-9222
chr5:41857617-41859178	chr5	+	41857861	41859176	True	NM_000436,NM_175921	chr5,chr5	-,+	OXCT1,C5orf51	11672,45293
chr19:43849190-43850118	chr19	+	43849404	43850140	True	NM_020406,NR_026881,NM_002784	chr19,chr19,chr19	+,+,-	CD177,PRG1,PSG9	7684,3067,-75722
chr3:48953429-48954261	chr3	+	48953435	48953509	True	NM_006321,NM_001123040	chr3,chr3	+,-	ARIH2,C3orf71	2771,3367
chr11:133400370-133401935	chr11	+	133400584	133401821	True	NR_027276,NM_001012393	chr11,chr11	+,-	LOC100128239,OPCML	500345,632
chr2:128569147-128570136	chr2	+	128569186	128570018	True	NM_032740,NM_018383,NM_001006622,NM_001006623	chr2,chr2,chr2,chr2	+,-,-,-	SFT2D3,WDR33,WDR33,WDR33	-110640,-425,-425,-425
chr3:4510519-4512446	chr3	+	4510832	4512259	True	NM_001099952,NM_182760,NM_001164675,NM_001164674	chr3,chr3,chr3,chr3	+,-,-,-	ITPR1,SUMF1,SUMF1,SUMF1	22772,-1866,-1866,-1866
chr16:14915710-14916781	chr16	+	14916018	14916609	True	NR_023387,NM_014287	chr16,chr16	-,+	ABCC6P2,NOMO1	2001,11033
chr16:14915710-14916781	chr16	-	18584569	18585106	False	NR_003569,NM_173614	chr16,chr16	+,-	ABCC6P1,NOMO2	-2051,-11135
chr16:14915710-14916781	chr16	+	16314781	16315372	False	NM_001171,NM_001079528,NM_001004067	chr16,chr16,chr16	-,-,+	ABCC6,ABCC6,NOMO3	2007,2007,11016
chr6:11538873-11539892	chr6	+	11538891	11539903	True	NM_001142393,NM_001100829	chr6,chr6	-,+	NEDD9,TMEM170B	-156310,-431
chr12:6665836-6666412	chr12	+	6665885	6666321	True	NM_001039670,NM_001193457,NM_080730,NR_036467,NM_002046	chr12,chr12,chr12,chr12,chr12	-,-,-,-,+	IFFO1,IFFO1,IFFO1,IFFO1,GAPDH	-636,-636,-636,-636,-22279
chr14:94857640-94858064	chr14	+	94857724	94858060	True	NM_001127704,NM_001127705,NM_001127706,NM_001127707,NM_001127700,NM_001127701,NM_001127702,NM_001127703,NM_006215,NM_001002236,NM_001002235,NM_000295	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	-,-,-,-,-,-,-,-,+,-,-,-	SERPINA1,SERPINA1,SERPINA1,SERPINA1,SERPINA1,SERPINA1,SERPINA1,SERPINA1,SERPINA4,SERPINA1,SERPINA1,SERPINA1	-695,-695,-695,-695,-695,-695,-695,-695,169722,-695,-695,-2571
chr2:26629502-26629726	chr2	+	26629593	26629683	True	NM_153835,NM_145038	chr2,chr2	-,+	GPR113,CCDC164	-59908,-4867
chr1:13418795-13419853	chr1	+	13419048	13419134	True	NM_001012276,NM_001098376,NM_001010890	chr1,chr1,chr1	-,+,+	PRAMEF8,PRAMEF15,PRAMEF9	-28283,2041,2041
chr1:13418795-13419853	chr1	+	13639845	13639931	False	NM_001012276,NM_001098376,NM_001010890	chr1,chr1,chr1	-,+,+	PRAMEF8,PRAMEF15,PRAMEF9	-28295,2041,2041
chr12:52585697-52586020	chr12	+	52585792	52585950	True	NM_182507,NM_001081492,NR_027358	chr12,chr12,chr12	-,-,+	KRT80,KRT80,LOC283404	-8,-8,18763
chrX:48272709-48273243	chrX	+	48272766	48273204	True	NM_175729,NM_001040612,NM_005636,NM_001034832	chrX,chrX,chrX,chrX	-,-,-,-	SSX4,SSX4B,SSX4,SSX4B	-1422,-1422,-1422,-1422
chrX:48272709-48273243	chrX	-	48241107	48241545	False	NM_175729,NM_175711,NM_001040612,NM_005636,NM_001034832	chrX,chrX,chrX,chrX,chrX	+,-,+,+,+	SSX4,SSX3,SSX4B,SSX4,SSX4B	1422,-24965,1422,1422,1422
chr16:88717848-88718084	chr16	+	88717848	88718106	True	NM_000101,NR_024402	chr16,chr16	-,+	CYBA,MGC23284	-391,11674
chr12:104531839-104532129	chr12	+	104531848	104531918	True	NM_006166,NM_013320	chr12,chr12	-,+	NFYB,HCFC2	172,-73663
chr1:171653938-171654453	chr1	+	171653983	171654108	True	NM_001007239,NM_000261	chr1,chr1	+,-	METTL13,MYOC	96652,-32210
chr2:96934235-96935056	chr2	+	96934330	96935093	True	NM_004804,NM_017849,NM_001193304	chr2,chr2,chr2	+,-,-	CIAO1,TMEM127,TMEM127	-2497,-2579,-2579
chr14:95047010-95047653	chr14	+	95047014	95047544	True	NM_173850,NM_000624	chr14,chr14	-,+	SERPINA12,SERPINA5	-62833,186
chr3:12447477-12448348	chr3	+	12447494	12448305	True	NM_001195279,NM_015869	chr3,chr3	-,+	LOC100129480,PPARG	138716,-54545
chr9:2622452-2622694	chr9	+	2622533	2622623	True	NR_015375,NM_003383,NM_001018056	chr9,chr9,chr9	-,+,+	FLJ35024,VLDLR,VLDLR	-160,-791,-791
chr13:78493655-78493876	chr13	+	78493659	78493797	True	NM_001122659,NM_003991,NM_001201397,NM_144595	chr13,chr13,chr13,chr13	-,-,-,+	EDNRB,EDNRB,EDNRB,SLAIN1	-693,-693,156,-178415
chr20:61991801-61992068	chr20	+	61991881	61992051	True	NM_020882,NM_000744	chr20,chr20	+,-	COL20A1,CHRNA4	-67394,694
chr15:89533800-89534015	chr15	+	89533800	89533919	True	NM_007011,NM_005928	chr15,chr15	+,-	ABHD2,MFGE8	97461,-77137
chr19:29413540-29413979	chr19	+	29413573	29413995	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	42042,290191
chr20:39996175-39996395	chr20	+	39996203	39996355	True	NM_022896,NM_052846	chr20,chr20	+,-	LPIN3,EMILIN3	-26694,-705
chr16:5122232-5123806	chr16	+	5122265	5123693	True	NM_001098514,NM_019109,NM_152459	chr16,chr16,chr16	-,+,-	C16orf89,ALG1,C16orf89	-6154,-507,-6154
chr22:17083733-17083955	chr22	+	17083851	17083993	True	NM_014406,NR_001591	chr22,chr22	-,+	CCT8L2,psiTPTE22	-10151,-1101
chr17:2701263-2702216	chr17	+	2701280	2701920	True	NM_001100398,NM_015085,NR_031654	chr17,chr17,chr17	+,+,-	RAP1GAP2,RAP1GAP2,MIR1253	-1599,-1599,-49804
chr3:20052646-20052910	chr3	+	20052653	20052892	True	NM_003884,NR_027694	chr3,chr3	+,-	KAT2B,C3orf48	28631,936
chr9:139743601-139743843	chr9	+	139743630	139743836	True	NM_003792,NM_206920,NM_014172,NM_001080482,NM_001135861	chr9,chr9,chr9,chr9,chr9	-,+,+,+,+	EDF1,MAMDC4,PHPT1,C9orf172,PHPT1	16952,2982,-425,-4814,-425
chr13:48814550-48815871	chr13	+	48814721	48815887	True	NM_014166,NM_021999	chr13,chr13	-,+	MED4,ITM2B	-145481,-7506
chr2:202562773-202563684	chr2	+	202562794	202563730	True	NM_033066,NM_139158	chr2,chr2	-,+	MPP4,CDK15	-21,107467
chr1:4484529-4485128	chr1	+	4484613	4485177	True	NR_027088,NM_207356	chr1,chr1	+,-	LOC284661,C1orf174	-12553,-667756
chr15:56035890-56036496	chr15	+	56035938	56036444	True	NM_173814,NM_001198784	chr15,chr15	-,+	PRTG,FLJ27352	-761,-335266
chr11:50152228-50153571	chr11	+	50152378	50152855	True	NR_003034,NM_001001955	chr11,chr11	-,+	LOC441601,OR4C13	104836,-178489
chr19:16433302-16433696	chr19	+	16433313	16433715	True	NM_054113,NM_021235,NM_016270	chr19,chr19,chr19	-,-,+	CIB3,EPS15L1,KLF2	-149027,149097,1935
chr14:53259946-53260935	chr14	+	53260248	53260952	True	NM_198066,NM_145251	chr14,chr14	-,+	GNPNAT1,STYX	-1862,-63416
chrX:99911046-99912325	chrX	+	99911223	99911831	True	NM_003270,NM_014467	chrX,chrX	-,+	TSPAN6,SRPX2	-19429,-12111
chr1:226680286-226681482	chr1	+	226680590	226681482	True	NM_001618,NM_001003665	chr1,chr1	-,+	PARP1,C1orf95	-84789,55018
chr19:9415321-9416468	chr19	+	9415640	9416276	True	NM_001202406,NM_198535	chr19,chr19	+,-	ZNF559,ZNF699	18171,-73
chr12:21810166-21810545	chr12	+	21810173	21810441	True	NM_030572,NM_002300,NM_001174097	chr12,chr12,chr12	+,-,-	C12orf39,LDHB,LDHB	-130968,398,337
chr12:121416667-121417304	chr12	+	121416852	121417300	True	NR_024345,NM_000545	chr12,chr12	-,+	NCRNA00262,HNF1A	-6757,-354
chr6:35745302-35745944	chr6	+	35745441	35745683	True	NM_001010886,NM_207409,NM_001832	chr6,chr6,chr6	+,+,-	C6orf127,C6orf126,CLPS	3147,-1100,19469
chrY:16168363-16168581	chrY	+	16168441	16168519	True	NM_181880,NM_004679	chrY,chrY	+,+	VCY1B,VCY	-390,-394
chrY:16168363-16168581	chrY	-	16097970	16098048	False	NM_181880,NM_004679	chrY,chrY	-,-	VCY1B,VCY	390,394
chr1:202188164-202188426	chr1	+	202188164	202188424	True	NM_001017404,NR_037664	chr1,chr1	+,-	LGR6,PTPN7	-4932,-57448
chr22:44581271-44581579	chr22	+	44581410	44581548	True	NR_024426,NM_001099294,NM_001137606,NM_022141,NR_024428	chr22,chr22,chr22,chr22,chr22	+,-,+,+,+	PARVG,KIAA1644,PARVG,PARVG,PARVG	-4700,127233,-4213,-4700,-4254
chr14:80667627-80669088	chr14	+	80667701	80668957	True	NM_000793,NM_001018036,NM_013989,NM_001007023	chr14,chr14,chr14,chr14	-,+,-,-	DIO2,TSHR,DIO2,DIO2	9628,752911,9628,8946
chr8:1444173-1444607	chr8	+	1444200	1444460	True	NM_004745,NR_033895	chr8,chr8	+,-	DLGAP2,LOC286083	5108,-193373
chr6:14701308-14702163	chr6	+	14701326	14702196	True	NM_001031713,NM_004973	chr6,chr6	-,+	CCDC90A,JARID2	-886537,544330
chr17:1092445-1092827	chr17	+	1092488	1092820	True	NM_001164405,NM_021962,NM_001159746	chr17,chr17,chr17	+,-,-	BHLHA9,ABR,ABR	81037,-9357,-1872
chr19:33465003-33465581	chr19	+	33465091	33465407	True	NM_152266,NM_032816	chr19,chr19	+,-	C19orf40,CCDC123	-1994,-2222
chr14:21852742-21854305	chr14	+	21852831	21854351	True	NM_014828,NR_003029,NM_007192	chr14,chr14,chr14	+,-,-	TOX4,SNORD9,SUPT16H	90983,6111,-406
chr2:62922468-62923739	chr2	+	62922596	62923266	True	NM_198276,NM_001142616,NM_015252	chr2,chr2,chr2	-,+,+	TMEM17,EHBP1,EHBP1	-188992,9734,9734
chr17:43716513-43717119	chr17_ctg5_hap1	-	1150523	1150735	False	NR_026901,NR_026906,NR_026905	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	+,-,-	LOC644172,C17orf69,C17orf69	37703,296,296
chr17:43716513-43717119	chr17	+	43716577	43717156	True	NR_026901,NR_026906,NR_026905	chr17,chr17,chr17	-,+,+	LOC644172,C17orf69,C17orf69	-36829,-296,-296
chr20:47544147-47544826	chr20	+	47544418	47544724	True	NM_006420,NM_020820	chr20,chr20	+,-	ARFGEF2,PREX1	-6194,-99998
chr12:31812955-31813442	chr12	+	31813158	31813436	True	NM_173802,NM_001135863,NM_001113402	chr12,chr12,chr12	+,+,-	METTL20,METTL20,AMN1	-1088,-600,68726
chr5:111734176-111735135	chr5	+	111734482	111735081	True	NR_027706,NM_022140	chr5,chr5	+,-	FLJ11235,EPB41L4A	20198,19980
chr11:75344792-75346142	chr11	+	75344954	75346172	True	NM_033063,NM_001235	chr11,chr11	-,+	MAP6,SERPINH1	33357,-71835
chr2:74273981-74274246	chr2	+	74274091	74274295	True	NM_144993,NM_001035505	chr2,chr2	+,-	TET3,BOLA3	-692,100794
chr8:58911720-58913605	chr8	+	58911855	58913636	True	NM_000780,NM_147189	chr8,chr8	-,+	CYP7A1,FAM110B	499135,-4802
chr12:29498356-29499765	chr12	+	29498359	29499820	True	NM_018099,NM_016570	chr12,chr12	+,-	FAR2,ERGIC2	-121821,34381
chr16:73083899-73084164	chr16	+	73083898	73084145	True	NM_006885,NM_001164766,NR_027756	chr16,chr16,chr16	-,-,+	ZFHX3,ZFHX3,HTA	-1624,8440,42102
chr12:113376353-113377474	chr12	+	113376674	113377521	True	NM_001193521,NM_006187	chr12,chr12	-,+	RASAL1,OAS3	196088,-476
chr11:116700124-116700828	chr11	+	116700430	116700784	True	NM_000039,NM_000482,NM_000040	chr11,chr11,chr11	-,-,+	APOA1,APOA4,APOC3	7604,-6419,-13
chr9:132429275-132429532	chr9	+	132429313	132429429	True	NM_016307,NM_177999	chr9,chr9	+,-	PRRX2,ASB6	-1444,-24865
chr12:1101270-1102789	chr12	+	1101344	1102702	True	NM_134424,NR_027946,NM_178039,NR_027948,NR_027949,NM_178040	chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,+,+,+	RAD52,ERC1,ERC1,ERC1,ERC1,ERC1	-42481,-991,-991,-991,-991,-991
chrX:129470596-129471686	chrX	+	129470606	129471083	True	NM_022810,NM_003951,NM_178471	chrX,chrX,chrX	+,+,-	SLC25A14,SLC25A14,GPR119	2963,2963,48483
chr6:28197794-28199454	chr6	+	28198109	28199091	True	NR_002936,NM_001199479,NM_001199480,NM_006299	chr6,chr6,chr6,chr6	-,+,+,+	LOC222699,ZNF193,ZNF193,ZNF193	-11402,-5131,-5131,-5131
chr5:79346607-79346937	chr5	+	79346616	79346948	True	NM_003248,NM_001167741	chr5,chr5	+,-	THBS4,MTX3	-15503,-59528
chr22:32762683-32764103	chr22	+	32762869	32763779	True	NR_002596,NR_001450,NM_001098535	chr22,chr22,chr22	-,-,+	RFPL3S,RFPL3S,RFPL3	3334,3243,-9070
chr2:26920179-26921094	chr2	+	26920564	26921072	True	NM_002246,NM_001029881	chr2,chr2	+,-	KCNK3,CIB4	-5035,-56353
chr15:90745013-90745396	chr15	+	90745249	90745413	True	NM_198925,NM_006384	chr15,chr15	+,-	SEMA4B,CIB1	-738,31916
chr19:58367866-58369297	chr19	+	58368136	58369344	True	NM_032828,NR_024162,NM_001204817	chr19,chr19,chr19	+,-,+	ZNF587,FKBP1AP1,ZNF587	-7006,-29306,-7006
chr8:17401672-17402997	chr8	+	17401686	17402846	True	NM_001164771,NM_003046,NM_004686	chr8,chr8,chr8	+,+,-	SLC7A2,SLC7A2,MTMR7	-5459,-5459,-130646
chr3:44696548-44697105	chr3	+	44696828	44697137	True	NM_003420,NM_020696	chr3,chr3	+,-	ZNF35,KIAA1143	-6650,106090
chr9:41435103-41436535	chr9	+	41435646	41435724	True	NM_015667	chr9	+	FAM75A7	64954
chr9:41435103-41436535	chr9	-	65574623	65574701	False	NR_024496,NM_015667	chr9,chr9	+,-	LOC442421,FAM75A7	919567,-65013
chr9:41435103-41436535	chr9	+	39290371	39290449	False	NM_033655,NM_001085452	chr9,chr9	-,+	CNTNAP3,FAM75A1	-2071,65249
chr9:41435103-41436535	chr9	+	39819616	39819694	False	NR_003528,NM_001085452	chr9,chr9	-,+	LOC653501,FAM75A1	-355090,65280
chrX:134978808-134980267	chrX	+	134979069	134980139	True	NM_001017438,NM_018666	chrX,chrX	-,+	CT45A6,SAGE1	-7825,-3344
chr10:27261086-27261678	chr10	+	27261245	27261473	True	NR_026795,NM_001172303	chr10,chr10	-,+	NCRNA00202,MASTL	-30315,182279
chr14:53625005-53625949	chr14	+	53625347	53625741	True	NM_030637,NM_001160148,NM_001160147,NM_145251	chr14,chr14,chr14,chr14	-,-,-,+	DDHD1,DDHD1,DDHD1,STYX	-5301,-5301,-5301,-428522
chr12:122464027-122465597	chr12	+	122464697	122465296	True	NM_001171993,NM_020993,NM_001024808	chr12,chr12,chr12	-,+,+	HPD,BCL7A,BCL7A	-138180,-4887,-4887
chrY:2619005-2619969	chrY	+	2619183	2619573	True	NR_003254,NM_003140	chrY,chrY	+,-	XGPY2,SRY	763,36269
chrY:2619005-2619969	chrX	+	2669183	2669573	False	NM_001141919,NM_001141920,NR_003254,NR_037842,NM_175569	chrX,chrX,chrX,chrX,chrX	+,+,+,-,+	XG,XG,XGPY2,NCRNA00102,XG	519,519,763,-135795,519
chr1:76080179-76080674	chr1	+	76080227	76080645	True	NM_000016,NM_001130058,NM_152697	chr1,chr1,chr1	+,-,-	ACADM,SLC44A5,SLC44A5	109397,-3428,-3428
chr7:79083585-79083792	chr7	+	79083640	79083780	True	NR_031667,NM_012301	chr7,chr7	+,-	MIR548M,MAGI2	316791,-750
chr2:234216632-234217366	chr2	+	234216657	234217417	True	NM_000541,NM_018218	chr2,chr2	+,-	SAG,USP40	-399,256872
chr7:66135755-66136198	chr7	+	66135906	66135968	True	NM_153033,NR_002933	chr7,chr7	+,-	KCTD7,LOC493754	-42089,-92408
chrX:102884913-102886144	chrX	+	102885133	102886178	True	NM_004780,NM_001142418,NM_001006640,NM_001006639	chrX,chrX,chrX,chrX	+,-,+,+	TCEAL1,MORF4L2,TCEAL1,TCEAL1	-1293,55618,-1537,-1293
chrX:140672525-140672777	chrX	+	140672686	140672756	True	NM_013453,NM_145662	chrX,chrX	-,-	SPANXA1,SPANXA2	130,154
chrX:140672525-140672777	chrX	-	140677938	140678008	False	NM_013453,NM_145662	chrX,chrX	+,+	SPANXA1,SPANXA2	-130,-154
chrX:140672525-140672777	chrX	+	140786448	140786518	False	NM_032417,NM_013453,NM_145665	chrX,chrX,chrX	-,+,-	SPANXD,SPANXA1,SPANXE	130,-108640,187
chr15:34872916-34873429	chr15	+	34872925	34873387	True	NM_175741,NR_027410	chr15,chr15	+,-	C15orf55,GOLGA8B	-234910,2434
chr2:139530160-139530748	chr2	+	139530266	139530770	True	NM_007226,NR_033658	chr2,chr2	-,+	NXPH2,LOC647012	7091,124123
chr19:49946632-49946838	chr19	+	49946636	49946834	True	NM_020309,NM_153329,NM_001145396,NM_017916	chr19,chr19,chr19,chr19	-,+,+,-	SLC17A7,ALDH16A1,ALDH16A1,PIH1D1	-1828,9638,9638,8331
chr3:43663864-43664448	chr3	+	43663937	43664353	True	NM_016006,NM_001204832,NM_001204834,NM_001204831,NM_018075,NM_001204833	chr3,chr3,chr3,chr3,chr3,chr3	+,-,-,-,-,-	ABHD5,ANO10,ANO10,ANO10,ANO10,ANO10	68021,-377,-377,-377,-377,-377
chr1:158219609-158220249	chr1	+	158219707	158220287	True	NM_001763,NM_001764	chr1,chr1	+,-	CD1A,CD1B	3639,81084
chr11:85472945-85473246	chr11	+	85472993	85473259	True	NM_001162953,NM_001162951,NM_173556	chr11,chr11,chr11	-,-,+	SYTL2,SYTL2,CCDC83	-3949,-3949,92884
chr11:62473953-62474591	chr11	+	62474118	62474628	True	NM_001130702,NR_037949,NR_037948,NM_001122955,NM_012202,NM_032667	chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,+,-	BSCL2,BSCL2,BSCL2,BSCL2,GNG3,BSCL2	-331,2513,2513,601,485,-331
chr6:33561173-33561967	chr6	+	33561253	33561575	True	NR_027908,NR_028361	chr6,chr6	-,+	C6orf227,GGNBP1	-138,-9828
chr2:179314010-179314736	chr2	+	179314107	179314721	True	NM_001042702,NM_001139518,NM_001139517,NM_003690	chr2,chr2,chr2,chr2	+,-,-,-	DFNB59,PRKRA,PRKRA,PRKRA	1441,684,813,1287
chr3:87035334-87036239	chr3	+	87035358	87036105	True	NM_016206,NM_014043	chr3,chr3	-,+	VGLL3,CHMP2B	4203,240307
chr12:53127611-53128378	chr12	+	53127690	53128330	True	NM_199187,NM_175078	chr12,chr12	+,-	KRT18,KRT77	214324,-30443
chr14:20799203-20800284	chr14	+	20799204	20800078	True	NM_182851,NM_182852,NM_001042618,NM_182849,NR_003693,NM_021178	chr14,chr14,chr14,chr14,chr14,chr14	-,-,+,-,-,-	CCNB1IP1,CCNB1IP1,PARP2,CCNB1IP1,SNORD126,CCNB1IP1	-1668,-1671,11694,1430,-4506,1430
chr6:27840145-27840699	chr6	+	27840146	27840715	True	NM_003546,NM_003511,NM_003533,NM_005322	chr6,chr6,chr6,chr6	-,+,-,-	HIST1H4L,HIST1H2AL,HIST1H3I,HIST1H1B	632,-7090,-47,-4787
chr13:25157225-25158466	chr13	+	25157545	25158472	True	NM_006437,NR_002815	chr13,chr13	-,+	PARP4,LOC374491	-70597,-3250
chr13:25157225-25158466	chr13	-	25538887	25538937	False	NR_026730,NM_030979	chr13,chr13	-,+	TPTE2P1,PABPC3	3720,131338
chrX:133679245-133679665	chrX	+	133679351	133679629	True	NR_029962,NR_029946,NR_024607,NR_030399,NM_000194,NR_030227,NR_030587,NR_030228	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,+,-,-,-	MIR450A1,MIR424,MGC16121,MIR542,HPRT1,MIR450A2,MIR450B,MIR503	-4890,1162,1081,-3884,-85227,-4714,-5059,849
chr19:343635-344077	chr19	+	343708	343996	True	NM_017550,NM_130760	chr19,chr19	-,+	MIER2,MADCAM1	847,152493
chr16:30457313-30458113	chr16	+	30457317	30457960	True	NM_001114380,NM_012248	chr16,chr16	+,-	ITGAL,SEPHS2	26022,-93
chr4:47497894-47498265	chr4	+	47498044	47498174	True	NM_020453,NM_017845	chr4,chr4	+,-	ATP10D,COMMD8	-10694,-32368
chr8:67625216-67626093	chr8	+	67625231	67626036	True	NM_001033578,NM_025054	chr8,chr8	+,-	SGK3,VCPIP1	-629,-45779
chr15:44067518-44068214	chr15	+	44067539	44068091	True	NM_001199877,NM_025165	chr15,chr15	+,-	SERF2,ELL3	1202,1461
chr5:180403794-180405564	chr5	+	180403859	180405153	True	NM_197975,NM_152283	chr5,chr5	+,-	BTNL3,ZFP62	10691,-115573
chr10:9799878-9800880	chr10	+	9800134	9800916	True	NR_027082,NM_001025077	chr10,chr10	-,+	SFTA1P,CELF2	1036011,1246342
chr17:21504285-21505906	chr17	+	21504461	21505762	True	NM_001113434,NM_001194958	chr17,chr17	-,+	C17orf51,KCNJ18	-49520,-196064
chr18:3446340-3446564	chr18	+	3446498	3446610	True	NM_019856,NM_173211,NM_173210,NM_173208,NM_170695,NM_003244,NM_173209,NM_173207	chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18	-,+,+,+,+,+,+,+	MYOM1,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1	-226392,7161,4980,3420,4980,3561,3362,997
chr10:129845454-129845658	chr10	+	129845455	129845623	True	NM_130435,NM_001145966	chr10,chr10	+,-	PTPRE,MKI67	189,78895
chr7:140614762-140615393	chr7	+	140614865	140615184	True	NM_001195278,NM_004333	chr7,chr7	+,-	LOC100131199,BRAF	158847,9432
chr22:42227465-42228373	chr22	+	42227500	42228391	True	NM_004599,NM_052945	chr22,chr22	+,-	SREBF2,TNFRSF13C	714,94480
chr7:131415546-131417365	chr7	+	131415670	131417215	True	NM_005397,NM_013255	chr7,chr7	-,+	PODXL,MKLN1	-174294,-403126
chr19:9896879-9897203	chr19	+	9896910	9897016	True	NM_001048241,NM_001077624	chr19,chr19	+,-	UBL5,ZNF846	41551,-17500
chr7:26240835-26241053	chr7	+	26240834	26241086	True	NM_002137,NM_007276,NM_031243,NM_016587	chr7,chr7,chr7,chr7	-,+,-,+	HNRNPA2B1,CBX3,HNRNPA2B1,CBX3	-421,-55,-421,237
chr18:55106505-55106884	chr18	+	55106529	55106905	True	NM_000140,NM_004852	chr18,chr18	-,+	FECH,ONECUT2	147114,-3663
chr7:139169171-139170174	chr7	+	139169334	139169845	True	NM_198508,NM_001080511	chr7,chr7	-,+	KLRG2,CLEC2L	-877,38828
chr7:143603147-143603632	chr7	+	143603149	143603603	True	NM_014719,NM_001004685	chr7,chr7	-,+	FAM115A,OR2F2	-3977,28722
chr3:14859177-14859911	chr3	+	14859220	14859900	True	NM_152536,NM_022497	chr3,chr3	+,-	FGD5,MRPS25	568,246978
chr7:57079521-57080232	chr7	+	57079526	57079692	True	NR_036270,NR_036102	chr7,chr7	-,+	MIR4283-2,MIR3147	-55955,393038
chr7:57079521-57080232	chr7	-	63025268	63025406	False	NR_028349,NR_036246	chr7,chr7	-,+	LOC100287834,MIR4283-1	-165849,56061
chr2:37522298-37523760	chr2	+	37522528	37523766	True	NM_012413,NM_005813	chr2,chr2	+,-	QPCT,PRKD3	47986,20506
chr1:108742562-108742824	chr1	+	108742655	108742805	True	NM_213651,NM_013386,NM_001143987	chr1,chr1,chr1	-,-,+	SLC25A24,SLC25A24,NBPF6	-7292,219,250098
chr1:149852704-149854632	chr1	+	149852767	149854517	True	NM_175065,NM_003517,NM_003528	chr1,chr1,chr1	-,+,-	HIST2H2AB,HIST2H2AC,HIST2H2BE	5001,4007,3767
chr21:33094080-33095120	chr21	+	33094528	33094999	True	NM_020706,NM_000454,NM_001145445,NM_001145444	chr21,chr21,chr21,chr21	-,+,-,-	SCAF4,SOD1,SCAF4,SCAF4	9489,-62651,9489,9489
chr2:29036711-29038530	chr2	+	29036803	29037647	True	NM_001008779,NM_001142634,NM_182756,NM_017910	chr2,chr2,chr2,chr2	+,+,+,-	SPDYA,SPDYA,SPDYA,TRMT61B	1215,-3161,-3161,55578
chr17:10411542-10411792	chr17	+	10411646	10411840	True	NM_005963,NM_020233	chr17,chr17	-,+	MYH1,C17orf48	10069,189086
chr19:44344568-44344996	chr19	+	44344626	44344838	True	NM_182573,NM_181845	chr19,chr19	-,+	LYPD5,ZNF283	-19818,-13204
chr5:156772476-156773544	chr5	+	156772532	156773385	True	NM_001001343,NM_014376	chr5,chr5	-,+	FNDC9,CYFIP2	23,-76221
chr7:114561277-114562169	chr7	+	114561469	114562056	True	NM_002711,NM_001166346,NM_001166345,NM_199072	chr7,chr7,chr7,chr7	-,+,+,+	PPP1R3A,MDFIC,MDFIC,MDFIC	-1002387,152,152,152
chr19:39787493-39788049	chr19	+	39787589	39787929	True	NM_172140,NM_020862	chr19,chr19	+,-	IL29,LRFN1	-675,18097
chr6:3259622-3260082	chr6	+	3259729	3260119	True	NM_178012,NM_001135750,NM_001128591,NM_001128592	chr6,chr6,chr6,chr6	-,+,+,+	TUBB2B,PSMG4,PSMG4,PSMG4	-31761,-618,-618,-618
chr19:57832190-57832744	chr19	+	57832322	57832780	True	NM_020633,NM_213598	chr19,chr19	-,+	VN1R1,ZNF543	135377,-508
chr1:100229278-100231011	chr1	+	100229703	100230766	True	NR_037516,NM_001013660	chr1,chr1	+,-	MIR548AA1,FRRS1	-75144,637
chr22:35587945-35588438	chr22	+	35588095	35588461	True	NM_001003681,NM_005368	chr22,chr22	+,-	HMGXB4,MB	64983,424973
chr7:33943679-33943942	chr7	+	33943684	33943832	True	NM_133468,NM_203288	chr7,chr7	+,-	BMPER,RP9	1279,-794682
chr7:100182556-100182776	chr7	+	100182630	100182774	True	NM_033506,NM_002319,NM_001163499,NM_012172	chr7,chr7,chr7,chr7	+,-,+,+	FBXO24,LRCH4,FBXO24,FBXO24	1181,1052,4421,4421
chr11:19371086-19371389	chr11	+	19371092	19371426	True	NM_001111018,NM_024680	chr11,chr11	+,-	NAV2,E2F8	844,-108585
chr7:116508710-116510014	chr7	+	116508917	116509860	True	NR_002330,NM_006136	chr7,chr7	-,+	ST7OT1,CAPZA2	84579,-6407
chr6:41912318-41913144	chr6	+	41912473	41912843	True	NM_001760,NM_004053,NM_001136125	chr6,chr6,chr6	-,+,-	CCND3,BYSL,CCND3	-2921,-23559,-2921
chr6:159418462-159419355	chr6	+	159418706	159419152	True	NM_031924,NM_001195032	chr6,chr6	-,+	RSPH3,C6orf99	2107,-109147
chr6:170573042-170573367	chr6	+	170573098	170573400	True	NM_032448,NR_002787	chr6,chr6	+,-	FAM120B,LOC154449	42443,-1441
chr6:30185820-30186866	chr6_qbl_hap6	+	1479008	1479078	False	NR_027822,NM_003449	chr6_qbl_hap6,chr6_qbl_hap6	+,-	HLA-L,TRIM26	41176,-4934
chr6:30185820-30186866	chr6_dbb_hap3	+	1479771	1479841	False	NR_027822,NM_003449	chr6_dbb_hap3,chr6_dbb_hap3	+,-	HLA-L,TRIM26	41174,-4934
chr6:30185820-30186866	chr6_apd_hap1	+	1426281	1426351	False	NM_033229,NM_003449	chr6_apd_hap1,chr6_apd_hap1	+,-	TRIM15,TRIM26	-55143,-4934
chr6:30185820-30186866	chr6	+	30186087	30186157	True	NR_027822,NM_003449	chr6,chr6	+,-	HLA-L,TRIM26	41181,-4934
chr5:100238787-100239075	chr5	+	100238828	100239046	True	NM_005668,NM_175052,NM_198507	chr5,chr5,chr5	-,-,+	ST8SIA4,ST8SIA4,FAM174A	-1,-18,-367755
chr7:143453088-143454856	chr7	+	143453098	143453496	True	NM_178561,NM_001130026	chr7,chr7	-,+	CTAGE6P,FAM115C	1397,-40210
chr7:143453088-143454856	chr7	-	143270165	143270563	False	NM_005232,NM_001008747	chr7,chr7	-,+	EPHA1,CTAGE15P	-164180,-1326
chr4:123653614-123653823	chr4	+	123653641	123653871	True	NM_001178007,NM_152618,NR_024041	chr4,chr4,chr4	+,+,-	BBS12,BBS12,CETN4P	-15,-15,-28
chr2:86248378-86249095	chr2	+	86248452	86249134	True	NM_017952,NR_026984	chr2,chr2	+,-	PTCD3,LOC90784	84170,1907
chr17:73044048-73044328	chr17	+	73044055	73044368	True	NM_015353,NM_006356,NM_001003785	chr17,chr17,chr17	+,-,-	KCTD2,ATP5H,ATP5H	-827,-981,-981
chr3:159001238-159002368	chr3	+	159001404	159001877	True	NM_002888,NR_037483	chr3,chr3	-,+	RARRES1,MIR3919	-551129,-1026
chr17:35770419-35771385	chr17	+	35770555	35771407	True	NM_001488,NM_001166105,NM_133439,NM_198839,NM_198834	chr17,chr17,chr17,chr17,chr17	+,+,+,-,-	TADA2A,TADA2A,TADA2A,ACACA,ACACA	-3301,-3636,-3301,-3653,-3653
chr20:17948965-17949179	chr20	+	17948992	17949228	True	NR_003045,NM_152227,NM_014426,NM_052865	chr20,chr20,chr20,chr20	-,-,-,+	SNORD17,SNX5,SNX5,C20orf72	-5403,312,-24,533
chr8:37443667-37444006	chr8	+	37443703	37443864	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	109436,161757
chr11:128779178-128779653	chr11	+	128779329	128779699	True	NM_000890,NM_145013	chr11,chr11	+,-	KCNJ5,C11orf45	-18067,-3737
chr2:200322654-200323233	chr2	+	200322682	200323172	True	NM_001172509,NM_001172517,NR_026830	chr2,chr2,chr2	-,-,+	SATB2,SATB2,FLJ32063	99,6709,9648
chr11:118752974-118754384	chr11	+	118753264	118754423	True	NM_001716,NM_032966,NM_182557	chr11,chr11,chr11	+,+,-	CXCR5,CXCR5,BCL9L	117,9677,27241
chr9:136345698-136346708	chr9	+	136346463	136346543	True	NM_017586,NM_001145099,NM_017585	chr9,chr9,chr9	+,-,-	C9orf7,SLC2A6,SLC2A6	-21427,-2187,-2187
chr4:156133641-156135531	chr4	+	156133676	156135539	True	NM_000910,NM_001039580	chr4,chr4	+,-	NPY2R,MAP9	-3946,162633
chr7:72935611-72935852	chr7	+	72935671	72935757	True	NM_003508,NM_032408	chr7,chr7	+,-	FZD9,BAZ1B	-87613,914
chr19:44956013-44956217	chr19	+	44956160	44956242	True	NM_001205280,NM_014518	chr19,chr19	+,-	LOC147710,ZNF229	160697,-3495
chr1:1849911-1850215	chr1	+	1849932	1850022	True	NM_138705,NM_178545	chr1,chr1	+,-	CALML6,TMEM52	-3717,768
chr8:66581042-66581945	chr8	+	66581061	66581767	True	NM_018120,NM_001145838	chr8,chr8	-,+	ARMC1,MTFR1	-34609,340
chr1:1216345-1216652	chr1	+	1216432	1216664	True	NR_037668,NM_194458,NM_194315,NM_194457,NM_001130413,NM_058167	chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,-,+,-	SCNN1D,UBE2J2,UBE2J2,UBE2J2,SCNN1D,UBE2J2	-5845,-7198,-7198,-7198,-5845,-7198
chr12:108990516-108990722	chr12	+	108990570	108990740	True	NM_181724,NM_213595	chr12,chr12	-,+	TMEM119,ISCU	1204,-34327
chr22:44707066-44708122	chr22	+	44707198	44708154	True	NM_001099294,NM_001137606	chr22,chr22	-,+	KIAA1644,PARVG	627,-129992
chr10:71212319-71213993	chr10	+	71212354	71213963	True	NM_001057,NM_012339	chr10,chr10	-,+	TACR2,TSPAN15	-35680,-1179
chr11:85906580-85907913	chr11	+	85906653	85907768	True	NM_003797,NM_007166	chr11,chr11	+,-	EED,PICALM	48046,-126545
chr17:72321433-72322188	chr17	+	72321641	72322169	True	NM_153209,NM_001080466	chr17,chr17	+,-	KIF19,BTBD17	181,35839
chr8:135605920-135606586	chr8	+	135606004	135606627	True	NR_002438,NM_001029939	chr8,chr8	+,-	ZFAT-AS1,ZFAT	3686,102225
chr11:6261633-6262774	chr11	+	6261688	6262726	True	NM_001037329,NM_032127,NM_001098794	chr11,chr11,chr11	+,-,-	CNGA4,FAM160A2,FAM160A2	-1409,-5747,-5747
chr10:12173094-12173755	chr10	+	12173237	12173653	True	NM_018144,NR_024576,NR_024577,NM_014142,NM_001142628,NM_001142627	chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,-,+,+	SEC61A2,SEC61A2,SEC61A2,NUDT5,SEC61A2,SEC61A2	-1654,-1654,-1654,64548,-1654,-1654
chr10:104010433-104011651	chr10	+	104010936	104011658	True	NM_001199378,NM_001199379,NM_005029,NM_004193	chr10,chr10,chr10,chr10	+,+,-,+	GBF1,GBF1,PITX3,GBF1	-5739,-5739,-9705,-5739
chr1:247653344-247654809	chr1	+	247653376	247654746	True	NM_001004492,NR_027309,NM_001004698	chr1,chr1,chr1	-,-,+	OR2B11,LOC148824,OR2W5	-38092,39410,-89
chr2:24273287-24275211	chr2	+	24273508	24275242	True	NM_025203,NM_004116,NM_054033,NM_001142319	chr2,chr2,chr2,chr2	-,+,+,-	C2orf44,FKBP1B,FKBP1B,C2orf44	-3212,-975,-975,-3212
chr4:101110005-101111103	chr4	+	101110077	101110958	True	NM_145244,NR_002799	chr4,chr4	-,+	DDIT4L,LOC256880	748,-238494
chr3:27764808-27765018	chr3	+	27764825	27765053	True	NM_005442,NM_182523	chr3,chr3	-,+	EOMES,CMC1	-1040,518070
chr15:36881998-36882704	chr15	+	36882050	36882710	True	NM_001130010,NR_027320	chr15,chr15	+,-	C15orf41,CSNK1A1P1	-10289,228047
chr18:43684275-43684601	chr18	+	43684329	43684561	True	NR_026978,NM_138443,NM_004046,NM_001001937	chr18,chr18,chr18,chr18	+,+,-,-	HAUS1,HAUS1,ATP5A1,ATP5A1	-82,-82,-6042,-130
chr3:46412476-46413349	chr3	+	46412483	46413344	True	NM_001199149,NM_000579,NM_001100168	chr3,chr3,chr3	-,+,+	LTF,CCR5,CCR5	91867,-901,-901
chr22:36113373-36113952	chr22	+	36113908	36113994	True	NM_030642,NM_203377	chr22,chr22	+,-	APOL5,MB	-41,-94507
chrX:130185402-130187302	chrX	+	130185577	130187249	True	NM_144967,NM_182314	chrX,chrX	+,-	ARHGAP36,ENOX2	4966,-148369
chr19:54980507-54982407	chr19	+	54980604	54982331	True	NM_198988,NM_052925,NM_145057	chr19,chr19,chr19	-,+,-	LENG9,LENG8,CDC42EP5	-5710,-20590,2141
chr2:26255755-26256146	chr2	+	26256013	26256177	True	NM_002254,NM_016131	chr2,chr2	-,+	KIF3C,RAB10	-50570,551
chr19:49533587-49534474	chr19	+	49533703	49533763	True	NR_004383,NR_024244,NM_033378,NM_033377,NM_000737	chr19,chr19,chr19,chr19,chr19	+,-,+,-,-	SNAR-G1,SNAR-G2,CGB2,CGB1,CGB	6513,1331,1366,6478,-6110
chr9:98911743-98911994	chr9	+	98911759	98911995	True	NR_033838,NR_024129	chr9,chr9	+,-	LOC158435,NCRNA00092	-83689,-127722
chr2:165458480-165459210	chr2	+	165458482	165459228	True	NM_001040142,NM_004490	chr2,chr2	+,-	SCN2A,GRB14	636683,19182
chr1:53611603-53611829	chr1	+	53611645	53611857	True	NM_000098,NM_006671	chr1,chr1	+,-	CPT2,SLC1A7	50243,-3356
chr1:53068530-53068832	chr1	+	53068569	53068805	True	NM_015696,NM_015269	chr1,chr1	+,-	GPX7,ZCCHC11	-577,-49807
chr1:201182215-201182606	chr1	+	201182222	201182290	True	NM_001164586,NM_016456	chr1,chr1	+,-	IGFN1,TMEM9	-22320,-58590
chr14:63779730-63781225	chr14	+	63779759	63781107	True	NM_145171,NM_020663	chr14,chr14	-,+	GPHB5,RHOJ	3514,-108665
chr11:67503936-67504706	chr11	+	67503973	67504320	True	NM_007103,NM_001031615	chr11,chr11	+,-	NDUFV1,ALDH3B2	-129710,-55288
chr17:73777828-73778736	chr17	+	73777953	73778699	True	NM_005324,NM_001080419	chr17,chr17	-,+	H3F3B,UNK	-2093,1981
chr19:17503784-17504288	chr19	+	17503867	17504173	True	NM_004335,NM_138401	chr19,chr19	-,+	BST2,FAM125A	12261,26738
chr4:6696437-6696851	chr4	+	6696579	6696677	True	NM_005980,NM_203462	chr4,chr4	+,-	S100P,MRFAP1L1	-1074,14989
chr16:29470745-29471442	chr16	+	29471035	29471449	True	NM_177552,NR_037608,NR_037609,NM_001017390,NM_001014999,NR_002556,NM_001015000,NM_024044,NM_001031827,NM_001039182,NR_002557,NM_178044	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,-,+,+,-,-,-,+	SULT1A3,SLX1A-SULT1A3,SLX1B-SULT1A4,SULT1A4,SLX1A,LOC388242,SLX1A,SLX1B,BOLA2,BOLA2B,LOC613038,SLX1B	-19,-4682,-4682,-19,-5272,7500,-5272,-5272,-4750,-4750,7500,-5272
chr16:29470745-29471442	chr16	+	30210377	30210791	False	NM_177552,NR_037608,NR_037609,NM_001017390,NM_001014999,NR_002556,NM_001015000,NM_024044,NM_001031827,NM_001039182,NR_002557,NM_178044	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,-,+,+,-,-,-,+	SULT1A3,SLX1A-SULT1A3,SLX1B-SULT1A4,SULT1A4,SLX1A,LOC388242,SLX1A,SLX1B,BOLA2,BOLA2B,LOC613038,SLX1B	-19,-4682,-4682,-19,-5272,7507,-5272,-5272,-4750,-4750,7507,-5272
chr17:11901583-11903172	chr17	+	11901600	11903210	True	NM_144680,NM_003010	chr17,chr17	-,+	ZNF18,MAP2K4	-911,20924
chr7:44078384-44079228	chr7	+	44078831	44078901	True	NR_024116,NM_001014436,NM_001122956,NR_015401,NM_014063,NR_024416	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,+,+	RASA4P,DBNL,DBNL,FLJ35390,DBNL,FLJ35390	1371,5337,5337,-184,5337,165
chr14:75419817-75420170	chr14	+	75420025	75420185	True	NM_014239,NM_002632	chr14,chr14	+,-	EIF2B2,PGF	49426,2156
chr14:23427155-23427503	chr14	+	23427160	23427254	True	NM_017815,NM_173527,NM_001166269,NM_001166270	chr14,chr14,chr14,chr14	-,+,-,-	HAUS4,REM2,HAUS4,HAUS4	-809,-74779,-809,-809
chr4:185653649-185654478	chr4	+	185653666	185654319	True	NM_152683,NM_024629	chr4,chr4	+,-	CCDC111,MLF1IP	-82950,1026
chr17:44369078-44369856	chr17	+	44369209	44369432	True	NM_001193465,NM_014834	chr17,chr17	-,+	KIAA1267,LRRC37A	-66469,3064
chr11:3400608-3401187	chr11	+	3400741	3401221	True	NM_001130519,NM_001130520,NM_007152,NR_024248	chr11,chr11,chr11,chr11	-,-,-,+	ZNF195,ZNF195,ZNF195,LOC650368	-293,-293,-293,969
chr19:35992010-35992789	chr19	+	35992035	35992529	True	NM_014364,NR_033746,NM_001035516,NM_001126059	chr19,chr19,chr19,chr19	+,-,-,-	GAPDHS,DMKN,DMKN,DMKN	31784,8933,334,8912
chrX:106151228-106151622	chrX	+	106151231	106151609	True	NM_001171095,NM_001171706,NM_138382,NM_001171092	chrX,chrX,chrX,chrX	+,-,-,+	CLDN2,RIPPLY1,RIPPLY1,CLDN2	9980,-4670,-4670,-7895
chr7:108165117-108166395	chr7	+	108165256	108166428	True	NM_015723,NM_012328	chr7,chr7	-,+	PNPLA8,DNAJB9	260,43760
chr4:105410219-105411436	chr4	+	105410249	105411443	True	NM_025212,NM_017628	chr4,chr4	-,+	CXXC4,TET2	1080,655588
chr1:2459492-2459695	chr1	+	2459554	2459696	True	NM_018216,NM_003820,NM_001010926	chr1,chr1,chr1	-,+,-	PANK4,TNFRSF14,HES5	-1519,28108,2038
chr2:111491001-111491968	chr2	+	111491052	111491836	True	NM_004336,NM_001142807	chr2,chr2	-,+	BUB1,ACOXL	-55368,-953
chr4:65179290-65179571	chr4	+	65179513	65179581	True	NR_034138,NM_001010874	chr4,chr4	+,-	LOC100144602,TECRL	1356097,95647
chr15:51199176-51200196	chr15	+	51199399	51200152	True	NM_032802,NM_007347	chr15,chr15	-,+	SPPL2A,AP4E1	-141489,793
chr1:25290952-25291342	chr1	+	25290985	25291378	True	NM_013943,NM_001031680	chr1,chr1	+,-	CLIC4,RUNX3	-219276,173
chr12:5603629-5603977	chr12	+	5603634	5603994	True	NM_020373,NM_002527	chr12,chr12	-,+	ANO2,NTF3	451454,-387
chr11:73360579-73360966	chr11	+	73360614	73360957	True	NM_001130036,NM_001130034,NM_001130035,NM_001130033,NM_021200,NM_015159	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,-	PLEKHB1,PLEKHB1,PLEKHB1,PLEKHB1,PLEKHB1,FAM168A	-937,-2078,-2078,-3449,-3449,-51386
chr11:71498200-71498414	chr11	+	71498306	71498400	True	NM_018172,NM_152563,NR_029192,NM_001099653	chr11,chr11,chr11,chr11	+,+,-,+	FAM86C,FAM86C,LOC100133315,FAM86C	156,156,141143,156
chr19:36360355-36360571	chr19	+	36360402	36360464	True	NM_001024807,NM_004646,NM_005166	chr19,chr19,chr19	+,-,+	APLP1,NPHS1,APLP1	-1052,-17507,-1052
chr7:107301348-107301598	chr7	+	107301353	107301473	True	NM_000441,NR_028137	chr7,chr7	+,-	SLC26A4,LOC286002	-324,820
chr15:52030109-52030875	chr15	+	52030345	52030880	True	NM_153374,NM_001142885	chr15,chr15	-,+	LYSMD2,TMOD2	-25,12877
chr1:229631110-229631940	chr1	+	229631234	229631946	True	NM_018230,NM_014777	chr1,chr1	-,+	NUP133,URB2	12192,130034
chr15:35592691-35593891	chr15	+	35592690	35593536	True	NR_003144,NR_037507	chr15,chr15	+,-	LOC723972,MIR3942	-63216,71079
chr14:65452535-65453887	chr14	+	65452720	65453642	True	NM_002028,NM_198686	chr14,chr14	+,-	FNTB,RAB15	34,-13845
chr22:26566310-26566565	chr22	+	26566498	26566564	True	NM_021115,NM_001184773,NM_001184776,NM_001184777,NM_001184774,NM_001184775,NM_152841	chr22,chr22,chr22,chr22,chr22,chr22,chr22	+,+,+,+,+,+,-	SEZ6L,SEZ6L,SEZ6L,SEZ6L,SEZ6L,SEZ6L,HPS4	-1109,-1109,-1109,-1109,-1109,-1109,309037
chr2:103055259-103056419	chr2	+	103055499	103056296	True	NM_003853,NM_032718	chr2,chr2	+,-	IL18RAP,MFSD9	-20308,297092
chr9:136400616-136401166	chr9	+	136400617	136401129	True	NM_014694,NM_001080483,NM_001145320	chr9,chr9,chr9	+,-,+	ADAMTSL2,TMEM8C,ADAMTSL2	-693,-10549,-3382
chr9:107692951-107693326	chr9	+	107693010	107693154	True	NR_024011,NM_005502	chr9,chr9	+,-	LOC286367,ABCA1	-156434,-2483
chr11:114402630-114404146	chr11	+	114402653	114403804	True	NM_015523,NM_152315	chr11,chr11	+,-	REXO2,FAM55A	-92605,26835
chr19:50087816-50088172	chr19	+	50087842	50088166	True	NM_015953,NM_000951,NM_020719	chr19,chr19,chr19	-,+,+	NOSIP,PRRG2,PRR12	-4039,-3306,6745
chr6:55045926-55047028	chr6	+	55046031	55047003	True	NM_001526,NM_001042406	chr6,chr6	+,-	HCRTR2,HMGCLL1	-7018,397061
chrX:151080002-151080891	chrX	+	151080220	151080576	True	NR_029973,NM_002362,NM_001011548,NM_001011549,NM_001011550	chrX,chrX,chrX,chrX,chrX	-,+,+,+,+	MIR452,MAGEA4,MAGEA4,MAGEA4,MAGEA4	47658,4132,784,4820,6183
chr17:80676475-80676726	chr17	+	80676476	80676774	True	NM_024619,NM_006822	chr17,chr17	+,-	FN3KRP,RAB40B	-1945,-19878
chr8:124429377-124429781	chr8	+	124429381	124429751	True	NM_018024,NM_014109	chr8,chr8	+,-	WDYHV1,ATAD2	-467,-20676
chr7:114102258-114102719	chr7	+	114102357	114102772	True	NM_002711,NM_148899	chr7,chr7	-,+	PPP1R3A,FOXP2	-543275,-35860
chr22:36043068-36043885	chr22	+	36043274	36043701	True	NM_203377,NM_030641	chr22,chr22	-,+	MB,APOL6	-23873,722
chr15:25340913-25341122	chr15	+	25340917	25341126	True	NR_003332,NR_003335,NR_003334,NR_003337,NR_003336,NR_003339,NR_003338,NM_130838,NR_003340,NR_003341,NR_001290,NR_003361	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,-,+,+,+,+	SNORD116-17,SNORD116-21,SNORD116-20,SNORD116-23,SNORD116-22,SNORD116-25,SNORD116-24,UBE3A,SNORD116-26,SNORD116-27,SNORD116-19,SNORD116-28	-9302,-7025,-8167,-4043,-5906,1682,-1792,309584,3518,5594,-9302,8661
chr21:42554364-42554891	chr21	+	42554485	42554903	True	NM_182832,NM_138992	chr21,chr21	-,+	PLAC4,BACE2	2319,-14816
chr2:200822037-200823759	chr2	+	200822153	200823771	True	NM_001039693,NM_024520,NR_004862	chr2,chr2,chr2	-,+,-	C2orf60,C2orf47,C2orf60	-1694,-2171,-1694
chr2:202560891-202562773	chr2	+	202560890	202562794	True	NM_033066,NM_139158	chr2,chr2	-,+	MPP4,CDK15	673,108403
chr18:20736566-20737993	chr18	+	20736604	20737850	True	NM_138375,NM_032933	chr18,chr18	+,-	CABLES1,C18orf45	-866,280125
chr4:155702046-155702462	chr4	+	155702110	155702318	True	NM_144979,NM_021870	chr4,chr4	+,-	RBM46,FGG	108,-168208
chr19:55676051-55676488	chr19	+	55676180	55676379	True	NM_178837,NM_000363,NM_017729	chr19,chr19,chr19	-,-,+	C19orf51,TNNI3,EPS8L1	1694,-7080,-84475
chr7:21467117-21467366	chr7	+	21467202	21467414	True	NM_003112,NM_001127370	chr7,chr7	+,-	SP4,CDCA7L	274,518178
chr3:23851231-23851986	chr3	+	23851340	23851815	True	NM_001202476,NM_003341,NM_020345,NM_182666	chr3,chr3,chr3,chr3	+,+,-,+	UBE2E1,UBE2E1,NKIRAS1,UBE2E1	118,-4019,106774,-4019
chr17:64188500-64188999	chr17	+	64188525	64189004	True	NM_145036,NM_002737,NM_001199165	chr17,chr17,chr17	-,+,-	CCDC46,PRKCA,CCDC46	-538,109921,-313
chr11:79148181-79148409	chr11	+	79148180	79148446	True	NM_001098816,NM_020798	chr11,chr11	-,+	ODZ4,USP35	3299,-1248373
chr8:143749767-143750303	chr8	+	143749789	143750221	True	NR_033343,NM_003724,NM_001077527	chr8,chr8,chr8	+,-,-	PSCA,JRK,JRK	1504,1230,1230
chr14:37052106-37052468	chr14	+	37052167	37052513	True	NM_006194,NM_014360	chr14,chr14	+,-	PAX9,NKX2-8	74259,-381
chr1:90457918-90459171	chr1	+	90457958	90459214	True	NM_182976,NM_182975,NR_002830	chr1,chr1,chr1	+,+,-	ZNF326,ZNF326,GEMIN8P4	1463,1463,1361
chrY:21154890-21155651	chrY	+	21154928	21155614	True	NR_002159,NM_013230	chrY,chrY	+,-	TTTY9B,CD24	-263211,-223
chr20:60758407-60759268	chr20	+	60758444	60759004	True	NM_007232,NM_015666	chr20,chr20	-,+	HRH3,GTPBP5	36369,-421
chr4:48359865-48360495	chr4	+	48360057	48360300	True	NM_020846,NM_003215	chr4,chr4	+,-	SLAIN2,TEC	-16505,-88243
chrX:69485164-69485566	chrX	+	69485164	69485606	True	NM_004312,NM_002565	chrX,chrX	+,-	ARR3,P2RY4	2578,-5510
chrX:151807445-151807933	chrX	+	151807469	151807933	True	NM_001129826,NM_018558	chrX,chrX	-,+	CSAG3,GABRQ	69787,-893
chr17:58589554-58591078	chr17	+	58589875	58590908	True	NM_006380,NM_003620	chr17,chr17	-,+	APPBP2,PPM1D	12722,86635
chr4:10412189-10412475	chr4	+	10412384	10412523	True	NM_000798,NM_053042	chr4,chr4	+,-	DRD5,ZNF518B	-629185,46559
chr20:30693895-30695226	chr20	+	30694524	30695162	True	NR_002781,NM_014742	chr20,chr20	-,+	TSPY26P,TM9SF4	83063,2146
chr2:110704601-110705114	chr2	+	110704654	110705054	True	NR_037627,NR_036225,NR_027142,NR_027143	chr2,chr2,chr2,chr2	+,-,+,+	LOC100288570,MIR4267,LOC440895,LOC440895	212,122615,212,212
chr2:110704601-110705114	chr2	-	111181605	111182005	False	NR_037626,NR_037627,NR_027142,NR_027143	chr2,chr2,chr2,chr2	+,-,-,-	LOC100507334,LOC100288570,LOC440895,LOC440895	-178441,-212,-212,-212
chr2:110704601-110705114	chr2	+	111002602	111003002	False	NR_027063,NR_037626	chr2,chr2	-,+	NCRNA00116,LOC100507334	-22085,212
chr22:41698618-41699852	chr22	+	41698744	41699662	True	NM_017590,NM_002883	chr22,chr22	+,-	ZC3H7B,RANGAP1	-1229,-16528
chr1:108743243-108743732	chr1	+	108743283	108743755	True	NM_213651,NM_013386,NM_001143987	chr1,chr1,chr1	-,-,+	SLC25A24,SLC25A24,NBPF6	-7920,-309,249148
chr10:114059640-114061020	chr10	+	114060244	114060838	True	NR_028134,NM_058222	chr10,chr10	-,+	GUCY2GP,TECTB	55567,-16802
chr5:132299737-132300029	chr5	+	132299748	132299890	True	NM_014423,NM_002154	chr5,chr5	-,+	AFF4,HSPA4	-394,87771
chr1:16302618-16302947	chr1	+	16302637	16302981	True	NM_003443,NM_178840	chr1,chr1	-,+	ZBTB17,C1orf64	-10,27749
chr22:31559750-31560663	chr22	+	31560314	31560560	True	NR_024209,NR_037496,NM_001135825,NR_024211,NR_024210,NR_024212,NM_152267	chr22,chr22,chr22,chr22,chr22,chr22,chr22	+,-,+,+,+,+,+	RNF185,MIR3928,RNF185,RNF185,RNF185,RNF185,RNF185	-4237,-4209,-4237,-4237,-4237,-4237,-4237
chr2:95691129-95691340	chr2	+	95691128	95691188	True	NR_037597,NM_022440,NM_022438,NM_002371,NM_022439	chr2,chr2,chr2,chr2,chr2	-,+,+,+,+	LOC442028,MAL,MAL,MAL,MAL	-78041,290,290,290,290
chr21:45595253-45595815	chr21	+	45595283	45595429	True	NM_198155,NM_015259	chr21,chr21	+,-	C21orf33,ICOSLG	-41840,65455
chr8:48923987-48924998	chr8	+	48924102	48924936	True	NM_003350,NM_006904	chr8,chr8	+,-	UBE2V2,PRKDC	-3166,-51359
chrY:25127447-25129200	chrY	+	25127614	25129124	True	NM_004678,NM_001002760,NM_001002761,NM_004081	chrY,chrY,chrY,chrY	+,+,+,-	BPY2,BPY2B,BPY2C,DAZ1	1285,1285,1285,216165
chrY:25127447-25129200	chrY	+	26761355	26762865	False	NM_020364,NM_004678,NM_001002760,NM_001002761	chrY,chrY,chrY,chrY	-,+,+,+	DAZ3,BPY2,BPY2B,BPY2C	196824,1285,1285,1285
chrY:25127447-25129200	chrY	-	27199536	27201046	False	NM_004678,NM_001002760,NM_001002761,NM_001005786	chrY,chrY,chrY,chrY	-,-,-,+	BPY2,BPY2B,BPY2C,DAZ2	-1285,-1285,-1285,-219597
chr7:138720913-138721142	chr7	+	138720975	138721115	True	NM_001144920,NM_080660	chr7,chr7	+,-	TTC26,ZC3HAV1L	97374,-200
chr4:5021316-5021692	chr4	+	5021416	5021736	True	NM_018659,NM_018401	chr4,chr4	-,+	CYTL1,STK32B	-219,31790
chr16:70284427-70285132	chr16	+	70284785	70284973	True	NM_058219,NM_001014449	chr16,chr16	-,+	EXOSC6,DDX19B	910,48098
chr2:122512303-122513191	chr2	+	122512437	122513079	True	NM_032390,NM_004622	chr2,chr2	-,+	MKI67IP,TSN	-17934,41
chr20:32308064-32308811	chr20	+	32308141	32308845	True	NM_032819,NM_007238,NM_183397	chr20,chr20,chr20	+,-,-	ZNF341,PXMP4,PXMP4	10962,-5,-5
chr2:70779696-70780130	chr2	+	70779739	70780005	True	NM_001099691,NM_016297,NM_003236	chr2,chr2,chr2	-,+,-	TGFA,PCYOX1,TGFA	1150,-294559,1150
chr1:120553033-120554359	chr1	+	120553161	120554307	True	NM_024408,NM_001100910	chr1,chr1	-,+	NOTCH2,FAM72B	58076,284697
chr1:120553033-120554359	chr1	-	145267095	145267161	False	NM_022359,NM_001039703	chr1,chr1	-,+	PDE4DIP,NBPF10	-190909,26209
chr1:169708131-169708548	chr1	+	169708158	169708568	True	NM_000450,NM_018186	chr1,chr1	-,+	SELE,C1orf112	-4938,55981
chr14:23058959-23059225	chr14	+	23058963	23059055	True	NM_022060,NM_001344	chr14,chr14	+,-	ABHD4,DAD1	8091,-820
chr5:140589634-140590093	chr5	+	140589633	140589875	True	NM_018932,NM_018933,NM_031947	chr5,chr5,chr5	+,+,-	PCDHB12,PCDHB13,SLC25A2	-1396,3633,93787
chr3:3167833-3168067	chr3	+	3167928	3168112	True	NM_175727,NM_182916	chr3,chr3	-,+	IL5RA,TRNT1	-15870,487
chr7:102072044-102072298	chr7	+	102072052	102072261	True	NM_017621,NM_032831,NM_001126340	chr7,chr7,chr7	-,+,+	ALKBH4,ORAI2,ORAI2	33113,1734,1734
chr8:143696916-143697457	chr8	+	143696997	143697423	True	NM_015193,NR_033343	chr8,chr8	-,+	ARC,PSCA	-1164,54302
chr12:53626886-53628118	chr12	+	53626982	53628000	True	NM_000966,NM_001170790	chr12,chr12	-,+	RARG,MFSD5	-946,17369
chr14:45431128-45431338	chr14	+	45431161	45431367	True	NM_017658,NM_015091	chr14,chr14	-,+	KLHL28,FAM179B	18,48
chr5:177435030-177435569	chr5	+	177435137	177435235	True	NM_006261,NM_001079527	chr5,chr5	-,+	PROP1,FAM153C	-11894,453
chr5:177435030-177435569	chr5	-	177208603	177208701	False	NR_003615,NM_173663	chr5,chr5	+,-	LOC728554,FAM153A	93560,-1098
chr5:177435030-177435569	chr5	+	175489521	175489619	False	NM_032361,NM_001079529	chr5,chr5	-,+	THOC3,FAM153B	-93976,22289
chr20:61882772-61883248	chr20	+	61882787	61883295	True	NM_152864,NR_024389	chr20,chr20	-,+	NKAIN4,FLJ16779	2647,2034
chr10:69449880-69450858	chr10	+	69450506	69450621	True	NM_013266,NM_012238	chr10,chr10	-,+	CTNNA3,SIRT1	5379,193805
chr16:66996081-66996869	chr16	+	66996088	66996892	True	NM_001185177,NM_001185176,NM_024922,NR_024525	chr16,chr16,chr16,chr16	+,+,+,-	CES3,CES3,CES3,FAM96B	-1007,4485,-1007,-27768
chr16:58035506-58036443	chr16	+	58035761	58036457	True	NM_001195302,NM_020807,NM_001204911,NM_024598	chr16,chr16,chr16,chr16	+,-,+,+	C16orf57,ZNF319,C16orf57,C16orf57	-541,-1999,-541,-541
chr19:21017755-21018213	chr19	+	21017754	21018258	True	NR_034060,NM_145297	chr19,chr19	+,-	ZNF85,ZNF626	87800,-173352
chr10:120502060-120503004	chr10	+	120502108	120502796	True	NM_199461,NM_153810	chr10,chr10	+,-	NANOS1,C10orf46	286431,12020
chr22:44708251-44708465	chr22	+	44708276	44708514	True	NM_001099294,NM_001137606	chr22,chr22	-,+	KIAA1644,PARVG	267,-131070
chr1:153282188-153283159	chr1	+	153282373	153283047	True	NM_052891,NM_002965	chr1,chr1	-,+	PGLYRP3,S100A9	203,47282
chr19:50084613-50085388	chr19	+	50084663	50085169	True	NM_015953,NM_000951,NM_020719	chr19,chr19,chr19	-,+,+	NOSIP,PRRG2,PRR12	-860,-127,9742
chr1:248790364-248791641	chr1	+	248790413	248791331	True	NM_001001964,NM_001013355	chr1,chr1	-,+	OR2T11,OR2G6	16,-105516
chr12:118544838-118546037	chr12	+	118545018	118546086	True	NM_002567,NM_019086	chr12,chr12	+,-	PEBP1,VSIG10	27783,-3208
chr1:6546539-6547470	chr1	+	6546742	6547520	True	NM_001042665,NM_001042664,NM_020631,NM_031475	chr1,chr1,chr1,chr1	-,-,-,+	PLEKHG5,PLEKHG5,PLEKHG5,ESPN	-728,3172,4292,-61945
chr16:31497503-31498086	chr16	+	31497535	31498075	True	NM_022744,NM_003041	chr16,chr16	-,+	C16orf58,SLC5A2	21681,-3147
chr6:43658764-43660630	chr6	+	43658894	43660295	True	NM_152732,NM_018135,NM_001193343	chr6,chr6,chr6	+,-,-	RSPH9,MRPS18A,MRPS18A	-46178,-3345,-3345
chr8:144121990-144122275	chr8	+	144121990	144122136	True	NR_026913,NM_173687	chr8,chr8	-,+	LOC100133669,C8orf31	-22183,-1362
chr16:53468513-53468734	chr16	+	53468597	53468783	True	NM_001012398,NM_005611	chr16,chr16	-,+	AKTIP,RBL2	68437,-297
chr22:21129786-21131662	chr22	+	21129794	21131108	True	NM_002650,NM_000185	chr22,chr22	-,+	PI4KA,SERPIND1	-40839,-1463
chr22:42342179-42342578	chr22	+	42342187	42342463	True	NM_024053,NM_001002876,NR_024355,NM_001110215	chr22,chr22,chr22,chr22	-,-,+,-	CENPM,CENPM,LOC339674,CENPM	735,735,5727,-5964
chr2:240325998-240326954	chr2	+	240326048	240326936	True	NR_036229,NM_006037	chr2,chr2	+,-	MIR4269,HDAC4	-98948,-3405
chr12:8186169-8186408	chr12	+	8186306	8186454	True	NM_004054,NM_018416	chr12,chr12	-,+	C3AR1,FOXJ2	32551,-998
chr19:35629741-35630055	chr19	+	35629839	35630103	True	NM_005031,NM_021902,NM_139284,NM_022006	chr19,chr19,chr19,chr19	+,+,-,+	FXYD1,FXYD1,LGI4,FXYD7	288,-158,-3661,4050
chr1:109824510-109825358	chr1	+	109824708	109825394	True	NM_001408,NM_001005290,NM_032636,NM_001032291	chr1,chr1,chr1,chr1	+,-,-,-	CELSR2,PSRC1,PSRC1,PSRC1	-32118,446,446,446
chr2:113876236-113876536	chr2	+	113876255	113876327	True	NM_000577,NM_173843,NM_173841,NM_173178,NM_173842	chr2,chr2,chr2,chr2,chr2	+,+,+,-,+	IL1RN,IL1RN,IL1RN,IL1F8,IL1RN	-841,-841,-841,-65815,8810
chr22:46451092-46452235	chr22	+	46451330	46451812	True	NM_018280,NR_027034	chr22,chr22	-,+	C22orf26,LOC150381	-1306,-1655
chr21:42733994-42734776	chr21	+	42734049	42734669	True	NM_002463,NM_001135099	chr21,chr21	+,-	MX2,TMPRSS2	-150,145383
chr15:37391719-37392155	chr15	+	37392072	37392184	True	NM_170674,NM_170675,NM_170676,NM_170677,NM_172315,NM_172316,NM_002399,NM_032499	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,-,-,-,-,-,+	MEIS2,MEIS2,MEIS2,MEIS2,MEIS2,MEIS2,MEIS2,C15orf41	570,570,570,570,-1569,-475,1366,-459317
chr11:10474587-10475427	chr11	+	10474787	10475476	True	NM_001025390,NM_001025389,NM_000480,NM_001172430,NM_001172431,NM_001190702	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,-	AMPD3,AMPD3,AMPD3,AMPD3,AMPD3,MTRNR2L8	2004,1189,-2614,7201,-2970,55297
chr12:25233376-25234320	chr12	+	25233590	25233993	True	NM_001101339,NM_006152	chr12,chr12	-,+	C12orf77,LRMP	-83217,-28464
chr22:42096380-42096791	chr22	+	42096621	42096685	True	NM_001003796,NM_152513	chr22,chr22	-,+	NHP2L1,MEI1	-11708,-1154
chr4:40055669-40055921	chr4	+	40055868	40055933	True	NM_018177,NR_027277	chr4,chr4	+,-	N4BP2,LOC344967	2590,2937
chr1:208418644-208418904	chr1	+	208418678	208418882	True	NR_026817,NM_025179	chr1,chr1	+,-	LOC148696,PLXNA2	-427005,-1013
chr7:105515483-105516610	chr7	+	105515554	105516575	True	NM_020725,NM_152750,NM_152749	chr7,chr7,chr7	-,+,-	ATXN7L1,CDHR3,ATXN7L1	507,87081,507
chr1:36553878-36554143	chr1	+	36553895	36554011	True	NM_017825,NM_005202,NM_014466	chr1,chr1,chr1	+,-,+	ADPRHL2,COL8A2,TEKT2	441,11889,-4270
chr7:31008751-31009819	chr7	+	31008974	31009788	True	NM_001202481,NM_000823	chr7,chr7	-,+	CRHR2,GHRHR	-269255,-5390
chr10:98025389-98027026	chr10	+	98025713	98026811	True	NM_001017520,NM_001114094,NM_013314	chr10,chr10,chr10	+,-,-	DNTT,BLNK,BLNK	37273,4572,4572
chr3:36980169-36981472	chr3	+	36980477	36981199	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	5399,53641
chr6:27792102-27792383	chr6	+	27792221	27792339	True	NM_021968,NM_021066,NM_003521,NM_003541	chr6,chr6,chr6,chr6	+,-,+,-	HIST1H4J,HIST1H2AJ,HIST1H2BM,HIST1H4K	-370,-9703,-9451,7016
chr3:97616918-97617189	chr3	+	97617156	97617229	True	NM_001042533,NM_177976	chr3,chr3	-,+	MINA,ARL6	74054,-133622
chr12:53402710-53403246	chr12	+	53402861	53402928	True	NM_001417,NR_033854	chr12,chr12	+,-	EIF4B,LOC283335	-2858,45351
chr5:101629906-101631441	chr5	+	101630098	101631358	True	NM_000919,NM_180991	chr5,chr5	+,-	PAM,SLCO4C1	570168,949
chr12:51344760-51345559	chr12	+	51344821	51345419	True	NM_001109619,NM_001174130	chr12,chr12	+,-	HIGD1C,SLC11A2	2362,57691
chrX:153882876-153883243	chrX	+	153882891	153883197	True	NM_172377,NM_020994,NM_139250	chrX,chrX,chrX	-,-,+	CTAG2,CTAG2,CTAG1A	-1038,-1038,-69524
chr10:1089558-1090252	chr10	+	1089563	1090071	True	NM_004508,NM_014023	chr10,chr10	-,+	IDI1,WDR37	5040,12704
chr13:92003627-92005078	chr13	+	92003865	92005090	True	NR_029490,NR_029492,NR_029508,NR_029489,NR_029488,NR_029487,NR_027039,NR_027349,NR_027350	chr13,chr13,chr13,chr13,chr13,chr13,chr13,chr13,chr13	+,+,+,+,+,+,-,+,+	MIR19B1,MIR20A,MIR92A1,MIR19A,MIR18A,MIR17,LOC144776,MIR17HG,MIR17HG	-484,-611,-362,-785,-925,-1071,-425014,-3856,-3856
chr14:96132421-96133357	chr14	+	96132446	96133371	True	NM_001098725,NR_028288	chr14,chr14	-,+	TCL1A,TCL6	47219,-14982
chr7:91764326-91764682	chr7	+	91764365	91764697	True	NM_001146152,NM_000786,NM_019004	chr7,chr7,chr7	-,-,+	CYP51A1,CYP51A1,ANKIB1	-306,-525,110850
chr7:2719734-2719955	chr7	+	2719751	2719817	True	NM_133463,NM_152743	chr7,chr7	+,-	AMZ1,BRAT1	-639,-124359
chr17:42633958-42634348	chr17	+	42633969	42634208	True	NM_001466,NR_036474	chr17,chr17	+,-	FZD2,GPATCH8	603,-53012
chr22:24952476-24953712	chr22	+	24952537	24953678	True	NM_004175,NM_031444	chr22,chr22	+,-	SNRPD3,C22orf13	-978,-1262
chr13:50702273-50702912	chr13	+	50702569	50702955	True	NR_002612,NR_002183	chr13,chr13	-,+	DLEU2,ST13P4	-2892,43198
chr20:32819201-32821112	chr20	+	32820050	32820764	True	NM_001672,NM_000687	chr20,chr20	+,-	ASIP,AHCY	27406,70501
chr9:135958258-135958824	chr9	+	135958619	135958681	True	NR_001275,NM_006266	chr9,chr9	+,-	CELP,RALGDS	-748,37930
chr2:74432243-74432720	chr2	+	74432331	74432573	True	NR_027405,NM_018221,NM_006636	chr2,chr2,chr2	+,-,+	MTHFD2,MOBKL1B,MTHFD2	-6702,-26336,-6702
chr4:189021798-189022347	chr4	+	189021894	189022384	True	NM_173553,NM_178556	chr4,chr4	-,+	TRIML2,TRIML1	4088,38213
chr10:90558529-90559647	chr10	+	90558547	90559312	True	NM_144590,NM_001128215	chr10,chr10	-,+	ANKRD22,LIPM	52472,3174
chr22:45558980-45559361	chr22	+	45559090	45559308	True	NM_007172,NR_031651,NM_153645	chr22,chr22,chr22	+,-,+	NUP50,MIR1249,NUP50	417,37642,1243
chr2:236401909-236402342	chr2	+	236401984	236402294	True	NM_014914,NM_001037131,NM_001485	chr2,chr2,chr2	+,+,-	AGAP1,AGAP1,GBX2	441,441,674408
chr19:12177937-12178146	chr19	+	12178024	12178086	True	NM_001136501,NM_001080404	chr19,chr19	+,-	ZNF844,ZNF878	-2529,-10897
chr10:5936037-5936424	chr10	+	5936042	5936472	True	NM_019046,NM_001009941,NM_032807,NM_001009943,NM_178150	chr10,chr10,chr10,chr10,chr10	-,-,+,-,+	ANKRD16,ANKRD16,FBXO18,ANKRD16,FBXO18	-4182,-4182,-39,-4182,-3879
chr9:104249801-104251441	chr9	+	104249917	104251335	True	NM_019592,NM_032342	chr9,chr9	+,-	RNF20,C9orf125	44797,-442
chrX:134477904-134478268	chrX	+	134477917	134478303	True	NM_007131,NM_152695	chrX,chrX	-,+	ZNF75D,ZNF449	-47952,392
chr16:67520124-67520592	chr16	+	67520437	67520547	True	NM_004691,NM_001138,NM_024519	chr16,chr16,chr16	-,-,+	ATP6V0D1,AGRP,FAM65A	-5348,-2721,42169
chr7:56173751-56174013	chr7	+	56173798	56173885	True	NM_015411,NM_016139	chr7,chr7	+,-	SUMF2,CHCHD2	-41932,353
chr1:100111978-100112616	chr1	+	100112005	100112562	True	NM_017734,NR_030382	chr1,chr1	+,-	PALMD,MIR548D1	-625,66008
chr6:160515784-160517670	chr6	+	160515978	160517435	True	NR_003288,NM_003058	chr6,chr6	+,-	LOC729603,SLC22A2	-1915,162581
chr1:22379971-22380799	chr1	+	22380006	22380757	True	NM_001039802,NM_030761,NM_044472,NM_001791	chr1,chr1,chr1,chr1	+,-,+,+	CDC42,WNT4,CDC42,CDC42	-937,88814,-937,-937
chr17:18528081-18528333	chr17	+	18528113	18528308	True	NR_036647,NM_001037330	chr17,chr17	-,+	CCDC144B,TRIM16L	673,97093
chr17:18528081-18528333	chr17	-	16594160	16594219	False	NM_020787,NM_014695	chr17,chr17	-,+	ZNF624,CCDC144A	-36993,-573
chr17:18528081-18528333	chr17	-	20225081	20225140	False	NM_001042685,NR_023380	chr17,chr17	-,+	LGALS9B,CCDC144C	145765,-646
chr11:66488793-66490253	chr11	+	66489153	66489701	True	NM_024650,NM_006946	chr11,chr11	+,-	C11orf80,SPTBN2	22505,-283
chr19:5869999-5870850	chr19	+	5870265	5870455	True	NM_002034,NM_001017921	chr19,chr19	-,+	FUT5,VMAC	146,34396
chr4:44398935-44400648	chr4	+	44399017	44400672	True	NM_198353,NM_021927	chr4,chr4	-,+	KCTD8,GUF1	50209,279760
chr17:8025739-8026077	chr17	+	8025860	8026062	True	NM_001165967,NR_036201,NM_021628,NM_001165960,NM_032580	chr17,chr17,chr17,chr17,chr17	-,+,-,-,-	HES7,MIR4314,ALOXE3,ALOXE3,HES7	1398,-34537,-4000,-3626,1398
chr7:14029478-14030464	chr7	+	14029506	14030476	True	NM_001163150,NM_004956,NM_001163151,NM_001163147,NM_005738,NM_001163152,NM_001163148,NM_001163149	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,+,-,-,-	ETV1,ETV1,ETV1,ETV1,ARL4A,ETV1,ETV1,ETV1	-3367,0,-3367,0,-1302646,-3367,624,439
chr17:53045815-53046157	chr17	+	53046005	53046199	True	NM_001162862,NM_001162861,NM_178509,NR_027941,NR_027942,NM_004375	chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,-,-,-	COX11,COX11,STXBP4,COX11,COX11,COX11	27,27,38,27,27,27
chr6:35316310-35316961	chr6	+	35316316	35316790	True	NM_001171819,NM_006238,NM_003214,NM_001171820,NM_001171818,NM_177435	chr6,chr6,chr6,chr6,chr6,chr6	+,+,-,+,+,+	PPARD,PPARD,TEAD3,PPARD,PPARD,PPARD	-6032,-6032,148121,-6032,-6032,-6032
chr12:111024359-111024854	chr12	+	111024536	111024706	True	NM_139283,NM_001082537	chr12,chr12	-,+	PPTC7,TCTN1	-3472,27125
chr11:56258483-56258786	chr11	+	56258496	56258806	True	NM_001005282,NM_001013356	chr11,chr11	-,+	OR5M8,OR8U8	90,-115448
chr18:33070168-33071365	chr18	+	33070213	33071357	True	NM_001098817,NM_020474,NM_194281	chr18,chr18,chr18	-,+,-	INO80C,GALNT1,INO80C	6648,163175,6648
chr2:69612424-69613962	chr2	+	69612719	69613728	True	NM_002056,NR_036073	chr2,chr2	-,+	GFPT1,MIR3126	704,-281956
chr7:158620673-158620920	chr7	+	158620694	158620936	True	NM_018051,NM_020728	chr7,chr7	+,-	WDR60,ESYT2	28332,1433
chr18:61325130-61325525	chr18	+	61325193	61325538	True	NM_080475,NM_006919	chr18,chr18	+,-	SERPINB11,SERPINB3	44655,3712
chr9:85047245-85047903	chr9	+	85047613	85047895	True	NM_152573,NM_001001670	chr9,chr9	-,+	RASEF,FAM75D1	630198,-443977
chr9:85047245-85047903	chr9	-	28148287	28148337	False	NM_152570,NM_020124	chr9,chr9	-,+	LINGO2,IFNK	571016,-624026
chr17:17875692-17875892	chr17	+	17875790	17875924	True	NM_001130090,NM_001130091,NM_001130092,NM_001033551,NM_031294,NM_001082968	chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,-,+,-	LRRC48,LRRC48,LRRC48,TOM1L2,LRRC48,TOM1L2	202,202,202,-6,202,-6
chr16:85589638-85590007	chr16	+	85589692	85589982	True	NM_001134473,NM_016095	chr16,chr16	+,-	KIAA0182,GINS2	55046,132656
chr11:3826225-3828106	chr11	+	3826256	3827936	True	NR_027018,NM_005387,NM_139131,NM_139132,NM_014489,NR_027016,NR_027017,NR_027014,NR_027015,NM_001145438,NM_016320	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,-,-,-,+,+,+,+,+,+,-	PGAP2,NUP98,NUP98,NUP98,PGAP2,PGAP2,PGAP2,PGAP2,PGAP2,PGAP2,NUP98	1303,-7234,-7234,-7234,1829,1829,-7124,-7360,-7182,-7265,-7234
chr3:80823976-80824527	chr3	+	80824206	80824348	True	NM_001128929,NM_000158	chr3,chr3	+,-	ROBO2,GBE1	-3677104,986666
chr7:73442548-73442878	chr7	+	73442627	73442839	True	NM_001081754,NM_000501,NM_001081752,NM_001081753,NM_152559,NM_001081755	chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,-,+	ELN,ELN,ELN,ELN,WBSCR27,ELN	-251,-251,-251,-251,-185772,-251
chr8:70391217-70392081	chr8	+	70391223	70392120	True	NM_015170,NM_001128205,NM_001146009	chr8,chr8,chr8	+,+,-	SULF1,SULF1,SLCO5A1	-12415,12907,353342
chr10:120839086-120839351	chr10	+	120839105	120839363	True	NM_207009,NM_003750	chr10,chr10	+,-	FAM45A,EIF3A	24247,1021
chr1:204915629-204916386	chr1	+	204915654	204916382	True	NM_203376,NM_001160331	chr1,chr1	-,+	TMEM81,NFASC	137256,-2351
chr2:39892610-39892820	chr2	+	39892619	39892809	True	NM_152390,NM_001167959,NM_025264	chr2,chr2,chr2	+,+,-	TMEM178,TMEM178,THUMPD2	225,-32,113657
chr5:118691973-118692242	chr5	+	118692024	118692210	True	NM_173666,NM_014350	chr5,chr5	-,+	DTWD2,TNFAIP8	-367784,-479
chr12:110835622-110836478	chr12	+	110835709	110836410	True	NM_001137664,NM_016238,NM_013300	chr12,chr12,chr12	-,-,+	ANAPC7,ANAPC7,C12orf24	5182,5182,69821
chr20:34043553-34043807	chr20	+	34043559	34043725	True	NM_007186,NM_000557	chr20,chr20	+,-	CEP250,GDF5	-387,-17532
chr18:3347880-3349555	chr18	+	3348033	3349139	True	NM_019856,NM_174886	chr18,chr18	-,+	MYOM1,TGIF1	-127927,62932
chr19:47525657-47525969	chr19	+	47525735	47525963	True	NM_002517,NM_017854	chr19,chr19	+,-	NPAS1,TMEM160	-1643,25969
chr3:101703334-101704903	chr3	+	101703339	101704803	True	NR_026934,NM_000986	chr3,chr3	+,-	LOC152225,RPL24	-43687,-297776
chr17:37305726-37305965	chr17	+	37305740	37305892	True	NM_020405,NM_000981	chr17,chr17	-,+	PLXDC1,RPL19	2060,50643
chr5:6579108-6579341	chr5	+	6579113	6579323	True	NR_024424,NR_024423,NM_001193455	chr5,chr5,chr5	+,+,-	LOC255167,LOC255167,NSUN2	4086,2963,54200
chr11:77705293-77705561	chr11	+	77705309	77705561	True	NM_003251,NM_033547	chr11,chr11	+,-	THRSP,INTS4	69345,206
chr2:32236980-32237750	chr2	+	32237177	32237356	True	NM_015955,NM_014946,NM_001137602	chr2,chr2,chr2	-,+,-	MEMO1,SPAST,MEMO1	-1479,51323,-1479
chr20:31622747-31623207	chr20	+	31622815	31623217	True	NM_080675,NM_174897	chr20,chr20	-,+	SUN5,BPIL3	-30576,-3412
chr12:31744268-31745171	chr12	+	31744413	31744875	True	NM_001135864,NM_144973	chr12,chr12	+,-	METTL20,DENND5B	55218,-461
chr11:124251234-124252757	chr11	+	124251256	124252644	True	NM_001005468,NM_001005198	chr11,chr11	-,+	OR8B2,OR8G5	645,-116597
chr5:1007943-1008513	chr5	+	1008109	1008487	True	NM_033120,NM_006598	chr5,chr5	+,-	NKD2,SLC12A7	680,103735
chr1:43233309-43235070	chr1	+	43233321	43234464	True	NM_024097,NM_001146289,NM_022356	chr1,chr1,chr1	+,-,-	C1orf50,LEPRE1,LEPRE1	-456,-566,-566
chr4:141264600-141266375	chr4	+	141264657	141266387	True	NM_001153446,NM_001153585,NM_001153690,NM_001153635,NR_033939	chr4,chr4,chr4,chr4,chr4	+,+,+,+,-	SCOC,SCOC,SCOC,SCOC,LOC100129858	-118,-100,-100,-118,28209
chr19:58963516-58964159	chr19	+	58963736	58964158	True	NM_207395,NM_003433	chr19,chr19	+,-	ZNF324B,ZNF132	-816,-12147
chr19:58963516-58964159	chr19	+	58979384	58979434	False	NM_017908,NM_003433,NM_014347	chr19,chr19,chr19	+,-,+	ZNF446,ZNF132,ZNF324	8360,-27795,-1023
chr14:74486102-74486322	chr14	+	74486172	74486260	True	NM_001249,NM_025057	chr14,chr14	-,+	ENTPD5,C14orf45	-146,-164
chr13:69558753-69559240	chr13	+	69558784	69559279	True	NR_002717,NM_020866	chr13,chr13	+,-	ATXN8OS,KLHL1	1122065,1123396
chr2:237420729-237421689	chr2	+	237420809	237421684	True	NM_020311,NM_024726	chr2,chr2	+,-	CXCR7,IQCA1	56695,-4717
chr5:141347171-141347829	chr5	+	141347176	141347508	True	NM_183399,NM_183398,NM_001201365,NM_016580,NM_183401,NM_183400,NM_004290	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,-,+,+,+	RNF14,RNF14,RNF14,PCDH12,RNF14,RNF14,RNF14	-827,942,-827,-8549,1203,942,942
chr7:25020145-25020354	chr7	+	25020214	25020344	True	NM_145321,NM_145322,NM_145320,NM_015550,NM_016447	chr7,chr7,chr7,chr7,chr7	-,-,-,-,+	OSBPL3,OSBPL3,OSBPL3,OSBPL3,MPP6	-454,-454,-454,-454,-407180
chr13:90882765-90882979	chr13	+	90882852	90883000	True	NR_030754,NR_027039	chr13,chr13	+,-	MIR622,LOC144776	435,695901
chr19:53758295-53758603	chr19	+	53758327	53758617	True	NM_182609,NM_173856	chr19,chr19	-,+	ZNF677,VN1R2	-216,2927
chr19:48615033-48616003	chr19	+	48615315	48615899	True	NM_001159323,NM_001159322,NM_022142,NM_003706	chr19,chr19,chr19,chr19	-,-,+,-	PLA2G4C,PLA2G4C,ELSPBP1,PLA2G4C	-1206,-1206,-117458,-1206
chr7:142634821-142635500	chr7	+	142634955	142635405	True	NM_019841,NM_178829	chr7,chr7	-,+	TRPV5,C7orf34	-4135,1197
chr9:103790687-103790964	chr9	+	103790901	103790977	True	NM_207299,NM_001127610	chr9,chr9	+,-	LPPR1,BAAT	53,354874
chr2:191296235-191297226	chr2	+	191296810	191297106	True	NM_017694,NM_001142645	chr2,chr2	+,-	MFSD6,TMEM194B	-23788,102412
chr11:116706496-116708251	chr11	+	116706532	116708103	True	NM_000040,NM_000039	chr11,chr11	+,-	APOC3,APOA1	-5959,285
chr16:1825091-1825333	chr16	+	1825099	1825255	True	NM_080861,NM_002513,NM_001010865,NM_023936,NM_012225	chr16,chr16,chr16,chr16,chr16	-,-,+,-,+	SPSB3,NME3,EME2,MRPS34,NUBP2	7376,-3389,-1921,-1959,7677
chr12:57326061-57327233	chr12	+	57326171	57327141	True	NM_148897,NM_007264	chr12,chr12	-,+	SDR9C7,GPR182	1098,61213
chr3:5230351-5230721	chr3	+	5230438	5230696	True	NM_014674,NR_037903	chr3,chr3	+,-	EDEM1,LOC100507582	-1137,-282252
chr8:27634974-27636577	chr8	+	27635266	27636434	True	NM_018246,NM_001017420	chr8,chr8	-,+	CCDC25,ESCO2	-5096,-3259
chr20:308559-308917	chr20	+	308577	308801	True	NM_153269,NM_006943	chr20,chr20	-,+	C20orf96,SOX12	-37187,-2389
chr8:145741401-145741989	chr8	+	145741691	145741961	True	NM_138431,NM_014665,NM_004260	chr8,chr8,chr8	+,+,-	MFSD3,LRRC14,RECQL4	-7190,1401,1299
chr17:15579908-15580422	chr17	+	15580045	15580398	True	NM_006470,NM_001130842	chr17,chr17	-,+	TRIM16,ZNF286A	5846,22492
chr17:15579908-15580422	chr17	-	18608653	18608921	False	NM_001145045,NM_001037330	chr17,chr17	-,+	ZNF286B,TRIM16L	-23081,16480
chr6:33559707-33560232	chr6	+	33559995	33560167	True	NR_027908,NR_028361	chr6,chr6	-,+	C6orf227,GGNBP1	998,-8577
chr2:32853463-32853918	chr2	+	32853535	32853657	True	NM_017735,NM_021209,NM_001193509	chr2,chr2,chr2	+,-,+	TTC27,NLRC4,TTC27	-499,-362723,-499
chr2:97652966-97654425	chr2	+	97653348	97654281	True	NM_001122646,NM_001164315	chr2,chr2	-,+	FAM178B,ANKRD36	-1047,124951
chr19:18940622-18941201	chr19	+	18941184	18941252	True	NM_000095,NM_002911	chr19,chr19	-,+	COMP,UPF1	-39070,1491
chr19:58396459-58398170	chr19	+	58397199	58397953	True	NM_001144989,NM_032828	chr19,chr19	-,+	ZNF814,ZNF587	2547,-36070
chr17:16258136-16258471	chr17	+	16258270	16258480	True	NM_181716,NM_018955	chr17,chr17	-,+	CENPV,UBB	-1458,25886
chr7:36193347-36193563	chr7	+	36193352	36193606	True	NM_030636,NM_001199707	chr7,chr7	+,-	EEPD1,KIAA0895	-567,213226
chr13:107212292-107213886	chr13	+	107212412	107213725	True	NM_018011,NR_034119	chr13,chr13	-,+	ARGLU1,LOC728192	6850,-183552
chr17:5343581-5343999	chr17	+	5343631	5344013	True	NR_027685,NM_001212	chr17,chr17	+,-	RPAIN,C1QBP	-20721,-1160
chr5:112879936-112881528	chr5	+	112880167	112880946	True	NM_022828,NM_001085377	chr5,chr5	+,-	YTHDC2,MCC	-30837,-55640
chr13:28543941-28544584	chr13	+	28543991	28544498	True	NM_001265,NR_002162	chr13,chr13	-,+	CDX2,ATP5EP2	-674,-24700
chr11:66206207-66206582	chr11	+	66206346	66206604	True	NM_170739,NM_170738,NM_178864,NM_016050	chr11,chr11,chr11,chr11	-,-,+,-	MRPL11,MRPL11,NPAS4,MRPL11	-36,-36,-17922,-36
chr18:60190900-60191128	chr18	+	60190925	60191109	True	NM_176787,NM_017742	chr18,chr18	-,+	PIGN,ZCCHC2	-336636,-318
chr6:26501533-26501840	chr6	+	26501672	26501840	True	NM_001732,NM_024639	chr6,chr6	+,-	BTN1A1,ZNF322A	-228,158173
chr10:73078615-73078895	chr10	+	73078764	73078850	True	NM_001174098,NM_018344,NR_033414,NR_033413,NM_001164375	chr10,chr10,chr10,chr10,chr10	+,+,+,+,-	SLC29A3,SLC29A3,SLC29A3,SLC29A3,C10orf105	159,159,159,159,400778
chr11:45308236-45308674	chr11	+	45308400	45308710	True	NM_020826,NM_020229	chr11,chr11	-,+	SYT13,PRDM11	-516,-192888
chr10:76817135-76818433	chr10	+	76817268	76818400	True	NM_001003892,NM_001174156	chr10,chr10	-,+	DUPD1,SAMD8	42,52992
chr5:16933161-16934279	chr5	+	16933214	16934316	True	NM_012334,NM_006317	chr5,chr5	-,+	MYO10,BASP1	2119,283433
chr17:79338199-79339129	chr17	+	79338203	79339141	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	34398,-33729
chr17:27051318-27051764	chr17	+	27051363	27051800	True	NM_001144942,NR_024575,NR_024579,NM_001144943,NM_000984,NR_000014,NM_178170,NM_031934,NR_000010,NR_000013,NM_138463,NM_001142625,NM_001160407,NM_001142624,NR_000009	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,+,+,+,-,+,+,-,-,-,-,+	RAB34,RAB34,RAB34,RAB34,RPL23A,SNORD42A,NEK8,RAB34,SNORD4A,SNORD42B,TLCD1,RAB34,TLCD1,RAB34,SNORD4B	-6455,-6112,-6112,-6077,-4414,-967,4031,-6455,-1814,-3846,1481,-6077,2200,-6077,-715
chr22:30922274-30922639	chr22	+	30922275	30922531	True	NM_001193336,NM_000355	chr22,chr22	-,+	LOC730005,TCN2	20188,80538
chr5:141064544-141065882	chr5	+	141064563	141065475	True	NM_022481,NM_173828	chr5,chr5	-,+	ARAP3,RELL2	-2763,-48104
chr4:21668847-21669961	chr4	+	21668904	21669614	True	NM_001035003,NM_145048	chr4,chr4	-,+	KCNIP4,PACRGL	29770,-966928
chr10:49899529-49901393	chr10	+	49899865	49901237	True	NM_020945,NM_021226	chr10,chr10	+,-	WDFY4,ARHGAP22	-6399,-86727
chr13:48573764-48574988	chr13	+	48573938	48574896	True	NM_003850,NM_018283	chr13,chr13	-,+	SUCLA2,NUDT15	616,36806
chr11:66611166-66611635	chr11	+	66611221	66611681	True	NM_001032279,NM_005133,NM_022172	chr11,chr11,chr11	+,+,-	RCE1,RCE1,PC	-389,-389,63709
chr2:118845136-118845667	chr2	+	118845249	118845614	True	NM_019044,NM_016133	chr2,chr2	-,+	CCDC93,INSIG2	-73510,435
chr1:1630859-1631085	chr1	+	1630894	1631122	True	NM_001110781,NR_002946	chr1,chr1	-,+	SLC35E2B,MMP23A	-6651,255
chr1:1630859-1631085	chr1	+	1567853	1567903	False	NM_001110781,NM_006983,NR_002946	chr1,chr1,chr1	-,+,+	SLC35E2B,MMP23B,MMP23A	56390,-344,255
chr1:1630859-1631085	chr1	+	1683504	1683576	False	NM_182838,NM_001198995,NM_001199787,NR_002946	chr1,chr1,chr1,chr1	-,-,-,+	SLC35E2,NADK,SLC35E2,MMP23A	-6066,6555,-6066,-52180
chr3:133646632-133647132	chr3	+	133646723	133647123	True	NM_021203,NM_025041	chr3,chr3	+,-	SRPRB,C3orf36	-143897,1583
chr2:232456425-232457069	chr2	+	232456655	232456873	True	NM_006056,NM_152614	chr2,chr2	-,+	NMUR1,C2orf57	-61473,701
chr19:2099020-2099454	chr19	+	2099066	2099352	True	NM_001031735,NM_001039846,NM_130807	chr19,chr19,chr19	+,+,-	IZUMO4,IZUMO4,MOBKL2A	-2249,-2249,-2797
chr6:41041004-41041264	chr6	+	41041194	41041264	True	NM_021705,NM_145063,NM_002505	chr6,chr6,chr6	+,-,+	NFYA,C6orf130,NFYA	-538,-1006,-538
chr9:130186956-130187468	chr9	+	130187084	130187480	True	NM_007135,NR_002449	chr9,chr9	+,-	ZNF79,SNORA65	-482,23486
chr19:53968889-53970105	chr19	+	53969258	53969802	True	NR_002938,NM_001004301	chr19,chr19	-,+	LOC284379,ZNF813	137007,1186
chr3:39193892-39194130	chr3	+	39193916	39194174	True	NM_033027,NM_145755	chr3,chr3	-,+	CSRNP1,TTC21A	978,-44815
chr2:74734947-74735262	chr2	+	74735023	74735285	True	NR_024606,NM_001009812,NM_032673,NM_016170	chr2,chr2,chr2,chr2	+,-,-,+	LOC151534,LBX2,PCGF1,TLX2	-5331,-4580,-202,6310
chr1:40554110-40554678	chr1	+	40554162	40554687	True	NM_001142604,NM_006367,NM_000310	chr1,chr1,chr1	-,+,-	PPT1,CAP1,PPT1	8513,-47966,8513
chr7:148957754-148958663	chr7	+	148957958	148958590	True	NM_001001661,NM_001195220	chr7,chr7	-,+	ZNF425,ZNF783	-134520,671
chr19:16145463-16145928	chr19	+	16145485	16145763	True	NR_024336,NR_024335,NM_021187	chr19,chr19,chr19	+,+,-	FLJ25328,FLJ25328,CYP4F11	-250,-1016,-99809
chr9:129622175-129622620	chr9	+	129622362	129622552	True	NM_001099270,NM_012098	chr9,chr9	+,-	ZBTB34,ANGPTL2	391,262542
chr16:66968751-66969288	chr16	+	66968759	66969331	True	NM_003869,NR_024525,NM_016062,NR_036684,NM_001128850,NM_004165,NM_198061	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,+,-,-,+	CES2,FAM96B,FAM96B,CES2,RRAD,RRAD,CES2	-463,-439,-439,-436,-9320,-9320,-463
chr16:66968751-66969288	chr16	+	66981904	66981954	False	NM_001185177,NR_024525	chr16,chr16	+,-	CES3,FAM96B	13177,-13584
chr1:201390204-201391745	chr1	+	201390233	201391800	True	NM_003281,NR_026667	chr1,chr1	-,+	TNNI1,RPS10P7	-11,97231
chr20:36794000-36794897	chr20	+	36794012	36794838	True	NM_004613,NM_021215,NM_198951	chr20,chr20,chr20	-,+,-	TGM2,RPRD1B,TGM2	-312,-132115,-312
chr4:6715888-6717787	chr4	+	6716304	6717746	True	NM_203462,NM_018366	chr4,chr4	-,+	MRFAP1L1,CNO	-4698,95
chr17:57187146-57188005	chr17	+	57187254	57187783	True	NM_001005207,NM_015294,NM_018304	chr17,chr17,chr17	-,-,+	TRIM37,TRIM37,PRR11	-2988,-2988,45076
chr11:46296980-46298072	chr11	+	46297197	46298073	True	NM_000741,NM_052854	chr11,chr11	-,+	CHRM4,CREB3L1	110084,1154
chr7:90893317-90893622	chr7	+	90893317	90893533	True	NM_006980,NM_003505	chr7,chr7	-,+	MTERF,FZD1	616533,249
chr9:136392171-136392775	chr9	+	136392209	136392771	True	NM_014694,NM_001080483,NM_001145320	chr9,chr9,chr9	+,-,+	ADAMTSL2,TMEM8C,ADAMTSL2	7203,-2141,4514
chr18:74519975-74520241	chr18	+	74519975	74520183	True	NM_007345,NM_001025081	chr18,chr18	+,-	ZNF236,MBP	15932,208934
chr3:111717002-111718031	chr3	+	111717363	111718077	True	NM_013259,NM_001190259,NM_001008272,NM_001008273	chr3,chr3,chr3,chr3	+,-,+,+	TAGLN3,GCET2,TAGLN3,TAGLN3	20,134125,20,0
chr17:34947951-34948181	chr17	+	34947964	34948070	True	NM_024864,NM_001033580,NM_024308	chr17,chr17,chr17	+,-,+	MRM1,MYO19,DHRS11	9954,-56659,155
chr3:136471681-136471902	chr3	+	136471762	136471930	True	NM_001097599,NM_005862	chr3,chr3	+,-	TMEM22,STAG1	65930,-517
chr9:137534943-137535611	chr9	+	137534981	137535391	True	NR_037469,NM_000093	chr9,chr9	-,+	MIR3689B,COL5A1	206777,-1380
chr1:52871912-52872848	chr1	+	52872066	52872649	True	NM_032864,NM_004153,NM_001190818,NM_001190819	chr1,chr1,chr1,chr1	+,-,-,-	PRPF38A,ORC1,ORC1,ORC1	-1898,-1923,-1923,-1923
chr2:43068178-43070015	chr2	+	43068276	43070024	True	NM_020744,NM_012205	chr2,chr2	+,-	MTA3,HAAO	-272656,-48525
chr1:202186252-202187579	chr1	+	202186349	202187390	True	NM_001017404,NR_037664	chr1,chr1	+,-	LGR6,PTPN7	-3117,-55633
chr19:57181988-57182958	chr19	+	57182302	57182982	True	NM_001193628,NM_001005850	chr19,chr19	+,-	LOC147670,ZNF835	-27826,1314
chr3:113466088-113466388	chr3	+	113466168	113466340	True	NM_001690,NM_025146	chr3,chr3	+,-	ATP6V1A,NAA50	-353,-1048
chr1:53191520-53192102	chr1	+	53191674	53191930	True	NM_024646,NM_023077	chr1,chr1	+,-	ZYG11B,SELRC1	200,-27636
chr12:6962975-6963843	chr12	+	6963029	6963666	True	NM_003481,NM_001098536,NM_031299	chr12,chr12,chr12	+,+,-	USP5,USP5,CDCA3	-1796,-1802,-2573
chr15:101401559-101402139	chr15	+	101401565	101402063	True	NM_001040616,NM_000693	chr15,chr15	-,+	LINS,ALDH1A3	-259120,17945
chr2:74666760-74666962	chr2	+	74666797	74666919	True	NM_033046,NM_001015056,NM_031288,NM_001015055	chr2,chr2,chr2,chr2	-,-,+,-	RTKN,RTKN,INO80B,RTKN	841,841,15230,2191
chr1:1343507-1344033	chr1	+	1343848	1344078	True	NM_001039577,NM_017971,NR_015434,NM_030937	chr1,chr1,chr1,chr1	-,-,+,-	CCNL2,MRPL20,LOC148413,CCNL2	-9130,-1155,-8994,-9130
chr3:50227765-50228681	chr3	+	50228366	50228660	True	NM_000172,NM_006764,NM_144499	chr3,chr3,chr3	+,-,+	GNAT1,IFRD2,GNAT1	382,101416,382
chr14:68162518-68163883	chr14	+	68162578	68163910	True	NM_016026,NM_152443	chr14,chr14	-,+	RDH11,RDH12	-68,4692
chr10:27530516-27530852	chr10	+	27530598	27530900	True	NM_032844,NM_145698,NR_024150,NM_001042473	chr10,chr10,chr10,chr10	+,-,-,-	MASTL,ACBD5,ACBD5,ACBD5	-86902,-790,218,218
chr19:56247679-56248909	chr19	+	56247809	56248951	True	NM_001145014,NM_176820	chr19,chr19	+,-	RFPL4A,NLRP9	21555,867
chr9:131708751-131709396	chr9	+	131708842	131709392	True	NM_015354,NM_014908	chr9,chr9	+,-	NUP188,DOLK	584,670
chr3:62356574-62357143	chr3	+	62356573	62357013	True	NM_018008,NM_020685	chr3,chr3	-,+	FEZF2,C3orf14	2227,-51229
chr21:31708082-31709738	chr21	+	31708703	31709726	True	NM_001077711,NM_181599	chr21,chr21	-,+	KRTAP27-1,KRTAP13-1	336,58665
chr8:117954152-117954931	chr8	+	117954178	117954962	True	NM_001172813,NM_001172811,NM_006265,NM_001025357,NM_001172815	chr8,chr8,chr8,chr8,chr8	+,+,-,+,+	SLC30A8,SLC30A8,RAD21,C8orf85,SLC30A8	8227,7549,-67073,-3771,8227
chr1:24102798-24104046	chr1	+	24102816	24103939	True	NM_001127621,NM_020362	chr1,chr1	-,+	GALE,PITHD1	22171,936
chr15:74420152-74420421	chr15	+	74420151	74420470	True	NM_001130137,NM_001130136,NM_001130138,NM_020851,NR_027073	chr15,chr15,chr15,chr15,chr15	+,+,+,+,-	ISLR2,ISLR2,ISLR2,ISLR2,LOC283731	1525,1244,2119,2272,1200
chr11:85759728-85760054	chr11	+	85759907	85760055	True	NM_001008660,NM_173556	chr11,chr11	-,+	PICALM,CCDC83	20103,-193820
chr5:176040173-176041050	chr5	+	176040271	176041037	True	NM_001099408,NM_052899	chr5,chr5	+,-	EIF4E1B,GPRIN1	16645,-3140
chr12:56417484-56418453	chr12	+	56417552	56418456	True	NM_006928,NM_022465	chr12,chr12	-,+	PMEL,IKZF4	-57056,-2914
chr16:22107500-22107797	chr16	+	22107500	22107766	True	NM_173615,NR_033694	chr16,chr16	+,-	VWA3A,PDZD9	-3695,-95069
chr10:21458337-21460003	chr10	+	21458377	21459830	True	NM_001173484,NM_001195627,NM_213569	chr10,chr10,chr10	-,+,-	NEBL,MLLT10,NEBL	3349,363270,3349
chr1:6581887-6582125	chr1	+	6581891	6582100	True	NM_198681,NM_138697	chr1,chr1	-,+	PLEKHG5,TAS1R1	-1822,33237
chr20:44514414-44515271	chr20	+	44514942	44515320	True	NM_080749,NM_080608,NM_001167594,NM_080603,NM_000308,NM_001127695	chr20,chr20,chr20,chr20,chr20,chr20	-,-,+,+,+,+	NEURL2,C20orf165,CTSA,ZSWIM1,CTSA,CTSA	4631,968,4270,-5152,4270,4270
chr14:59100111-59100660	chr14	+	59100229	59100697	True	NM_016651,NM_012460,NM_001079520	chr14,chr14,chr14	+,-,+	DACT1,TIMM9,DACT1	4059,-205997,4059
chr19:3728691-3728973	chr19	+	3728690	3728766	True	NM_014428,NM_012398	chr19,chr19	+,-	TJP3,PIP5K1C	-367,-28213
chr11:2924637-2924935	chr11	+	2924637	2924891	True	NM_183233,NM_002555,NM_007105	chr11,chr11,chr11	+,+,-	SLC22A18,SLC22A18,SLC22A18AS	-3737,-1176,334
chr2:87755389-87756156	chr2	+	87755393	87756136	True	NM_001078170,NR_024206,NR_024204,NR_024205	chr2,chr2,chr2,chr2	-,+,+,+	RGPD2,NCRNA00152,NCRNA00152,NCRNA00152	369213,-470,-470,-470
chr2:87755389-87756156	chr2	-	112251488	112252232	False	NR_024373,NM_207003,NR_015395	chr2,chr2,chr2	-,+,-	LOC541471,BCL2L11,LOC541471	510,-373061,510
chr5:39333352-39333922	chr5	+	39333396	39333660	True	NM_001737,NM_003999	chr5,chr5	-,+	C9,OSMR	31045,-487346
chr19:45663413-45663779	chr19	+	45663485	45663741	True	NM_212550,NM_198478	chr19,chr19	+,-	BLOC1S3,NKPD1	18261,-77
chr13:20807691-20809460	chr13	+	20807911	20809403	True	NM_001110221,NM_001110219,NM_001190965,NM_006783,NM_001110220	chr13,chr13,chr13,chr13,chr13	-,-,+,-,-	GJB6,GJB6,ZMYM2,GJB6,GJB6	-1377,-1377,-274988,-2539,-1377
chr22:50355500-50355716	chr22	+	50355540	50355758	True	NM_024105,NM_001001852	chr22,chr22	-,+	ALG12,PIM3	-43434,-1448
chr17:42197407-42197824	chr17	+	42197417	42197779	True	NM_001015053,NM_001171251,NM_005474	chr17,chr17,chr17	-,+,-	HDAC5,C17orf53,HDAC5	3285,21494,3285
chr7:72723601-72725150	chr7	+	72723609	72724785	True	NM_148956,NM_001168348,NM_018044,NM_001135211,NM_001168347	chr7,chr7,chr7,chr7,chr7	-,-,-,+,-	NSUN5,NSUN5,NSUN5,FKBP6,NSUN5	-745,-745,-745,17369,-745
chr3:52735676-52737362	chr3	+	52735696	52737169	True	NM_001010983,NM_152932,NM_014041,NM_018446,NR_003057	chr3,chr3,chr3,chr3,chr3	-,-,+,-,+	GLT8D1,GLT8D1,SPCS1,GLT8D1,SNORD69	2929,503,2687,2929,-9003
chr2:73519809-73520320	chr2	+	73519968	73520144	True	NM_001965,NR_029403	chr2,chr2	-,+	EGR4,CCT7	735,-58655
chr1:32666479-32666718	chr1	+	32666478	32666693	True	NM_001160042,NM_018134,NM_001099434,NM_024296,NM_019118	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	IQCC,IQCC,DCDC2B,CCDC28B,TMEM234	4542,4542,8001,-327,21283
chrX:77148009-77149267	chrX	+	77148434	77149043	True	NM_001866,NM_032121	chrX,chrX	+,-	COX7B,MAGT1	5917,2083
chr5:72419664-72420580	chr5	+	72419705	72420573	True	NM_004472,NM_173490,NM_001161342	chr5,chr5,chr5	-,+,+	FOXD1,TMEM171,TMEM171	323829,-3369,-3369
chr17:41279963-41280540	chr17	+	41280169	41280585	True	NR_003108,NM_007299,NM_007298,NM_007297,NM_007294,NR_027676,NM_007300	chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,-,-,-,-	NBR2,BRCA1,BRCA1,BRCA1,BRCA1,BRCA1,BRCA1	-2620,-2701,-4037,-2701,-2669,-2829,-2669
chr5:167914293-167915641	chr5	+	167914440	167915678	True	NM_002887,NR_029520	chr5,chr5	+,-	RARS,MIR103-1	-1031,72350
chr10:82036202-82037491	chr10	+	82036246	82037284	True	NM_000429,NM_032372	chr10,chr10	-,+	MAT1A,DYDC2	12200,79273
chr15:95981521-95982211	chr15	+	95981595	95982212	True	NR_027133,NR_027132,NR_034095	chr15,chr15,chr15	+,+,-	LOC145820,LOC145820,LOC400456	-5331,-5331,-111266
chr7:14022844-14024450	chr7	+	14022843	14024477	True	NM_001163147,NM_004956,NM_001163151,NM_001163150,NM_005738,NM_001163152,NM_001163148,NM_001163149	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,+,-,-,-	ETV1,ETV1,ETV1,ETV1,ARL4A,ETV1,ETV1,ETV1	5222,5222,1719,1719,-1295994,1719,6630,6445
chr15:91538759-91539343	chr15	+	91538762	91539391	True	NM_199413,NM_033544,NM_199414,NM_003981	chr15,chr15,chr15,chr15	-,+,-,-	PRC1,RCCD1,PRC1,PRC1	-958,-40712,-958,-958
chrX:37705204-37706294	chrX	+	37705556	37706280	True	NM_000397,NM_006520	chrX,chrX	+,-	CYBB,DYNLT3	-66338,659
chr22:19941341-19942375	chr22	+	19941407	19942316	True	NM_001135162,NM_001135161,NM_007310,NM_006440	chr22,chr22,chr22,chr22	+,+,+,-	COMT,COMT,COMT,TXNRD2	-2413,-2998,7753,-12048
chr10:120939554-120939917	chr10	+	120939705	120939922	True	NM_005308,NM_014098,NM_006793	chr10,chr10,chr10	+,-,-	GRK5,PRDX3,PRDX3	27274,-1360,-1360
chr12:9436872-9437249	chr12	+	9436910	9437242	True	NR_036263,NR_024374	chr12,chr12	-,+	MIR1244-3,LOC642846	-44763,-708
chr12:9436872-9437249	chr12	-	9600103	9600159	False	NR_033399,NR_024374	chr12,chr12	-,+	DDX12,LOC642846	659,-163901
chr20:13203195-13203732	chr20	+	13203268	13203488	True	NM_080826,NM_017714	chr20,chr20	+,-	ISM1,TASP1	-903,416145
chr8:9421634-9422508	chr8	+	9421694	9422498	True	NM_003747,NR_024281	chr8,chr8	+,-	TNKS,LOC157627	-8300,338392
chr12:8541163-8541598	chr12	+	8541347	8541629	True	NM_001007033,NR_024420	chr12,chr12	+,-	CLEC6A,LOC389634	66961,1769
chr4:925132-925348	chr4	+	925223	925391	True	NM_005255,NM_032326	chr4,chr4	-,+	GAK,TMEM175	833,870
chr21:33246023-33246237	chr21	+	33246126	33246214	True	NM_020706,NM_014586	chr21,chr21	-,+	SCAF4,HUNK	-141695,-549
chr6:14819480-14819835	chr6	+	14819491	14819871	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	426655,843468
chr3:10182604-10183214	chr3	+	10182613	10182939	True	NM_000551,NM_198156,NM_001164839	chr3,chr3,chr3	+,+,-	VHL,VHL,C3orf24	379,379,-32698
chr16:90083062-90083623	chr16	+	90083104	90083569	True	NM_001042610,NR_023348,NM_024043	chr16,chr16,chr16	-,+,-	DBNDD1,GAS8,DBNDD1	2431,5438,-6575
chrX:2848821-2849617	chrX	+	2848990	2849494	True	NM_009589,NM_001011719,NM_001669	chrX,chrX,chrX	-,+,-	ARSD,ARSH,ARSD	-1598,75159,-1598
chr16:2388348-2388914	chr16	+	2388352	2388721	True	NR_003574,NM_001089	chr16,chr16	+,-	ABCA17P,ABCA3	2201,2085
chr20:31367820-31368169	chr20	+	31367881	31368203	True	NM_175850,NM_053041	chr20,chr20	+,-	DNMT3B,COMMD7	-274,-36067
chr14:24665285-24665486	chr14	+	24665298	24665520	True	NM_006405,NM_001014842,NM_001184739,NM_174944,NM_024658	chr14,chr14,chr14,chr14,chr14	-,-,+,+,-	TM9SF1,TM9SF1,TSSK4,TSSK4,IPO4	-416,-416,9405,9405,-7174
chr12:56619674-56620508	chr12	+	56619914	56620337	True	NM_005785,NM_173596,NM_194359,NM_194358,NM_001135195,NM_024068	chr12,chr12,chr12,chr12,chr12,chr12	-,+,-,-,+,+	RNF41,SLC39A5,RNF41,RNF41,SLC39A5,OBFC2B	-4210,3482,-4179,-4210,4163,-1840
chr11:63995640-63995856	chr11	+	63995758	63995860	True	NM_031472,NM_001160389,NM_001033678,NM_032344,NM_005528,NM_003377,NM_001160392,NM_001160393,NM_001160390,NM_001128613,NM_001128612	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,+,+,+,-,-,-,+,+	TRPT1,TRPT1,TRPT1,NUDT22,DNAJC4,VEGFB,TRPT1,TRPT1,TRPT1,NUDT22,NUDT22	-2032,-2032,-2032,-2080,1892,6405,-2032,-2417,-2032,-2080,-2080
chrX:105861953-105863758	chrX	+	105862310	105863635	True	NM_001184782,NM_018015,NM_001171706	chrX,chrX,chrX	+,+,-	CXorf57,CXorf57,RIPPLY1	-7209,-7209,282977
chr7:100809061-100809363	chr7	+	100809157	100809323	True	NM_003378,NM_001283	chr7,chr7	-,+	VGF,AP1S1	-305,-11522
chr9:115821096-115822070	chr9	+	115821151	115822119	True	NM_003408,NR_024366	chr9,chr9	-,+	ZFP37,NCRNA00256A	-2155,53056
chr1:47800423-47801231	chr1	+	47800427	47801006	True	NM_001136140,NM_003035,NM_016308	chr1,chr1,chr1	+,-,+	CMPK1,STIL,CMPK1	-1009,-20608,-1009
chr19:39305429-39305886	chr19	+	39305731	39305811	True	NM_006149,NM_001042507	chr19,chr19	-,+	LGALS4,LGALS7B	-1991,-25932
chr7:1655796-1656925	chr7	+	1656121	1656874	True	NM_001134340,NR_001288	chr7,chr7	-,+	PSMG3,TFAMP1	-46453,-2073
chr11:130319476-130319697	chr11	+	130319486	130319700	True	NM_007037,NM_139055	chr11,chr11	-,+	ADAMTS8,ADAMTS15	-20947,-668
chr6:74063153-74063391	chr6	+	74063154	74063346	True	NM_001017361,NM_001025290	chr6,chr6	+,-	C6orf221,DPPA5	9053,703
chr1:85532814-85534661	chr1	+	85532904	85534451	True	NM_145172,NM_018298	chr1,chr1	+,-	WDR63,MCOLN3	-4962,-18735
chr6:112064260-112066129	chr6	+	112064676	112066130	True	NR_034109,NM_153048	chr6,chr6	+,-	LOC643749,FYN	-260052,14205
chr16:202059-202309	chr16	+	202221	202310	True	NM_001077350,NM_005332	chr16,chr16	-,+	NPRL3,HBZ	-13549,543
chr7:24324266-24324670	chr7	+	24324338	24324654	True	NM_001127453,NM_000905	chr7,chr7	-,+	DFNA5,NPY	472479,-582
chr17:79816395-79816921	chr17	+	79816398	79816892	True	NM_000918,NM_001002244	chr17,chr17	-,+	P4HB,ANAPC11	1702,32706
chr5:169532979-169533190	chr5	+	169533037	169533099	True	NM_144769,NM_012188,NM_001129891	chr5,chr5,chr5	+,+,-	FOXI1,FOXI1,FAM196B	-171,-171,-125293
chr12:40084257-40084964	chr12	+	40084574	40085012	True	NM_001031748,NM_005164	chr12,chr12	+,-	C12orf40,ABCD2	-64654,-70731
chr1:13448903-13449152	chr1	+	13448926	13449182	True	NM_001099854,NM_001024661,NM_001010890	chr1,chr1,chr1	-,-,+	PRAMEF14,PRAMEF13,PRAMEF9	3524,3524,-27801
chr1:13448903-13449152	chr1	+	13669781	13670037	False	NM_001099854,NM_001010890	chr1,chr1	-,+	PRAMEF14,PRAMEF9	3524,-27859
chr1:13448903-13449152	chr1	-	12855019	12855109	False	NM_023013,NM_001146344	chr1,chr1	+,-	PRAMEF1,PRAMEF11	-3524,36213
chr1:13448903-13449152	chr1	-	12920503	12920759	False	NM_001013631,NM_023014	chr1,chr1	-,+	HNRNPCL1,PRAMEF2	-11925,-3613
chr12:51158497-51159513	chr12	+	51158804	51159217	True	NM_005171,NM_001174130	chr12,chr12	+,-	ATF1,SLC11A2	-1066,243887
chr16:15488519-15489328	chr16	+	15488858	15489161	True	NM_001128423,NR_037466,NM_173803	chr16,chr16,chr16	+,-,+	MPV17L,MIR3180-4,MPV17L	449,-239999,449
chr11:71497970-71498200	chr11	+	71498016	71498216	True	NM_018172,NM_152563,NR_029192,NM_001099653	chr11,chr11,chr11,chr11	+,+,-,+	FAM86C,FAM86C,LOC100133315,FAM86C	340,340,141327,340
chr20:37382701-37383081	chr20	+	37382881	37383064	True	NR_027241,NM_024855	chr20,chr20	-,+	LOC388796,ACTR5	-318863,-5835
chr11:76316012-76317329	chr11	+	76316112	76317238	True	NM_020193,NM_005512	chr11,chr11	+,-	C11orf30,LRRC32	-160094,63856
chr1:171807409-171808698	chr1	+	171807521	171808714	True	NR_033704,NM_001136127,NM_015569	chr1,chr1,chr1	-,+,+	VAMP4,DNM3,DNM3	-96142,1906,1906
chr18:8604538-8605471	chr18	+	8604832	8605506	True	NM_001025300,NR_024419	chr18,chr18	+,-	RAB12,LOC100192426	3936,-237800
chr3:148804741-148805103	chr3	+	148804782	148805145	True	NM_032383,NM_139048,NM_003071	chr3,chr3,chr3	+,-,-	HPS3,HLTF,HLTF	42225,-441,-441
chr11:93449621-93451236	chr11	+	93449750	93451011	True	NR_002569,NR_003028	chr11,chr11	+,-	SCARNA9,SNORA25	3668,12852
chr1:41127265-41127658	chr1	+	41127289	41127601	True	NM_001142587,NM_014747	chr1,chr1	+,-	NFYC,RIMS3	29640,3773
chr1:1111276-1111573	chr1	+	1111265	1111612	True	NR_029834,NM_153254,NR_029957,NM_004195,NM_001130045,NR_029639	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,-,+,+	MIR200A,TTLL10,MIR429,TNFRSF18,TTLL10,MIR200B	-8073,3464,-6931,30527,-2030,-8832
chr9:118260743-118261060	chr9	+	118260779	118260974	True	NM_017418,NM_002160	chr9,chr9	+,-	DEC1,TNC	-356734,-380293
chr6:14948935-14949759	chr6	+	14948941	14949354	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	297172,713986
chr19:44009273-44010369	chr19	+	44009459	44010393	True	NM_198850,NM_174945	chr19,chr19	-,+	PHLDB3,ZNF575	-474,26946
chr5:84960269-84961261	chr5	+	84960269	84961057	True	NM_005711,NR_003719	chr5,chr5	-,+	EDIL3,NBPF22P	-1279658,617204
chrX:84498831-84499378	chrX	+	84498923	84499257	True	NM_021998,NM_001012980	chrX,chrX	+,-	ZNF711,SATL1	23,-134949
chr1:247580942-247581694	chr1	+	247581105	247581607	True	NM_183395,NM_001079821,NM_004895,NM_001127461,NM_001004492,NM_001127462	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,-,+	NLRP3,NLRP3,NLRP3,NLRP3,OR2B11,NLRP3	111,-1699,111,-1699,33727,111
chr4:140048773-140049041	chr4	+	140048772	140048842	True	NM_201999,NM_012118	chr4,chr4	-,+	ELF2,CCRN4L	11820,-111883
chr17:74532970-74533219	chr17	+	74532983	74533189	True	NM_134268,NM_001077620,NR_033357	chr17,chr17,chr17	-,+,+	CYGB,PRCD,PRCD	643,2931,-9366
chr2:29038530-29040281	chr2	+	29038653	29040116	True	NM_001008779,NM_001142634,NM_182756,NM_017910	chr2,chr2,chr2,chr2	+,+,+,-	SPDYA,SPDYA,SPDYA,TRMT61B	-61,-5010,-5010,53114
chr1:149455213-149456675	chr1	+	149455693	149456512	True	NR_027484,NM_001024599	chr1,chr1	+,-	FCGR1C,HIST2H2BF	-86457,-56464
chr1:149455213-149456675	chr1	-	206148613	206149312	False	NM_001123168,NM_001007544	chr1,chr1	+,-	FAM72A,C1orf186	-9754,139392
chr1:149455213-149456675	chr1	-	120849153	120849852	False	NM_001004340,NM_001100910	chr1,chr1	-,+	FCGR1B,FAM72B	86149,-10200
chr1:149455213-149456675	chr1	+	143902281	143902980	False	NM_207418,NR_034178	chr1,chr1	-,+	FAM72D,SRGAP2P2	10214,12767
chr3:183544541-183544958	chr3	+	183544597	183544951	True	NM_024871,NM_018023	chr3,chr3	-,+	MAP6D1,YEATS2	-1204,-129042
chr12:131437244-131438678	chr12	+	131437326	131438642	True	NM_194356,NM_198827	chr12,chr12	-,+	STX2,GPR133	-113515,177
chr19:7049019-7049323	chr19	+	7049019	7049314	True	NM_001164419,NM_144614,NM_001164425	chr19,chr19,chr19	-,+,-	MBD3L4,MBD3L2,MBD3L3	-8835,36,9382
chr19:7049019-7049323	chr19	-	7021478	7021773	False	NR_024372,NM_001136507	chr19,chr19	-,+	FLJ25758,MBD3L5	-15052,8820
chr18:44677045-44678942	chr18	+	44677163	44678746	True	NM_032124,NM_031303	chr18,chr18	-,+	HDHD2,KATNAL2	-292,-150433
chr8:144923771-144924022	chr8	+	144923828	144924070	True	NR_033849,NM_178564	chr8,chr8	+,-	LOC100128338,NRBP2	-107569,-682
chr2:70418074-70419027	chr2	+	70418141	70419034	True	NM_016297,NM_017880	chr2,chr2	+,-	PCYOX1,C2orf42	66196,10
chr19:55915267-55916500	chr19	+	55915397	55916307	True	NM_000991,NM_014501	chr19,chr19	+,-	RPL28,UBE2S	-18152,3068
chr17:1418496-1419205	chr17	+	1418515	1419251	True	NM_130766,NM_016532,NM_001135642,NR_028514	chr17,chr17,chr17,chr17	-,-,-,+	INPP5K,INPP5K,INPP5K,LOC100306951	981,981,981,961
chr3:109129481-109129855	chr3	+	109129621	109129690	True	NM_018189,NM_001145553	chr3,chr3	-,+	DPPA4,FLJ25363	-73202,-838
chr16:18584133-18584338	chr16	+	18584157	18584335	True	NR_003569,NM_173614	chr16,chr16	+,-	ABCC6P1,NOMO2	-1638,-10723
chr16:18584133-18584338	chr16	-	14916788	14916966	False	NR_023387,NM_014287	chr16,chr16	-,+	ABCC6P2,NOMO1	1643,10676
chr16:18584133-18584338	chr16	-	16315551	16315729	False	NM_001171,NM_001079528,NM_001004067	chr16,chr16,chr16	-,-,+	ABCC6,ABCC6,NOMO3	1649,1649,10659
chr2:88097220-88098090	chr2	+	88097559	88097641	True	NM_001078170,NM_001032392	chr2,chr2	-,+	RGPD2,PLGLB1	27703,-50012
chr2:88097220-88098090	chr2	-	87198921	87199003	False	NM_001032392,NM_001024457	chr2,chr2	-,+	PLGLB1,RGPD1	50028,-54242
chr11:69519926-69520540	chr11	+	69519961	69520512	True	NM_005117,NM_053056	chr11,chr11	-,+	FGF19,CCND1	-855,-64139
chr2:204002165-204002561	chr2	+	204002192	204002435	True	NM_177538,NM_018256	chr2,chr2	+,-	CYP20A1,WDR12	100728,-225243
chr4:25514909-25515657	chr4	+	25514989	25515699	True	NM_015187,NM_013367	chr4,chr4	-,+	SEL1L3,ANAPC4	348961,-136207
chr12:26986496-26986970	chr12	+	26986577	26987019	True	NM_002223,NM_001171888	chr12,chr12	-,+	ITPR2,FGFR1OP2	-446,104285
chr2:219186678-219187461	chr2	+	219187078	219187476	True	NM_022572,NM_022152	chr2,chr2	+,-	PNKD,TMBIM1	425,-29798
chr3:15469245-15469730	chr3	+	15469285	15469651	True	NM_033083,NM_152396	chr3,chr3	+,-	EAF1,METTL6	-272,-243
chr19:51106010-51106775	chr19	+	51106048	51106392	True	NM_032298,NR_004384,NM_001080457	chr19,chr19,chr19	-,+,-	SYT3,SNAR-F,LRRC4B	34960,1827,-34746
chr11:22705102-22706366	chr11	+	22705319	22706172	True	NM_005256,NM_022725	chr11,chr11	+,-	GAS2,FANCF	-9065,-57932
chr19:12267674-12268415	chr19	+	12267679	12268191	True	NM_003437,NR_037801,NR_037802,NM_145233	chr19,chr19,chr19,chr19	+,-,-,-	ZNF136,ZNF625,ZNF625-ZNF20,ZNF625	5680,-133,-133,-133
chr11:34637889-34639613	chr11	+	34638470	34639616	True	NM_001422,NM_012153	chr11,chr11	-,+	ELF5,EHF	-103140,2971
chr9:99848099-99848727	chr9	+	99848104	99848347	True	NR_002942,NR_036526	chr9,chr9	-,+	LOC340508,LOC100499484	-3877,152360
chrX:150869708-150870076	chrX	+	150869766	150870110	True	NR_029973,NR_033262,NM_024082	chrX,chrX,chrX	-,+,+	MIR452,PRRG3,PRRG3	258124,-3038,-6087
chr4:166795258-166795911	chr4	+	166795514	166795805	True	NM_001204760,NR_026575,NM_012464	chr4,chr4,chr4	+,-,+	TLL1,GK3P,TLL1	-1162,-594339,-1162
chr15:66678936-66679201	chr15	+	66678973	66679139	True	NM_002755,NM_017858	chr15,chr15	+,-	MAP2K1,TIPIN	71,-29919
chr5:158700663-158702577	chr5	+	158700918	158702268	True	NM_002187,NM_145049	chr5,chr5	-,+	IL12B,UBLCP1	55274,-10888
chr8:143761809-143762026	chr8	+	143761820	143761968	True	NM_003724,NM_005672	chr8,chr8	-,+	JRK,PSCA	-10419,3
chr11:128707731-128709262	chr11	+	128707838	128709196	True	NM_000890,NM_000220	chr11,chr11	+,-	KCNJ5,KCNJ1	52116,3218
chr1:179855426-179855673	chr1	+	179855474	179855628	True	NM_015602,NM_145034,NM_001199260,NM_022347	chr1,chr1,chr1,chr1	+,-,-,-	TOR1AIP1,TOR1AIP2,TOR1AIP2,TOR1AIP2	-4118,-8533,-8533,-8533
chr2:170579242-170580347	chr2	+	170579467	170580317	True	NM_001085447,NM_144711	chr2,chr2	-,+	C2orf77,KLHL23	-28536,10038
chr9:125676707-125677190	chr9	+	125676716	125676958	True	NM_012197,NM_018835,NM_001100588,NM_006626	chr9,chr9,chr9,chr9	+,-,-,-	RABGAP1,RC3H2,RC3H2,ZBTB6	26329,-9154,-9154,-1107
chr13:37494843-37495630	chr13	+	37494904	37495619	True	NM_001127217,NM_005905,NM_181503	chr13,chr13,chr13	-,-,+	SMAD9,SMAD9,EXOSC8	-495,-495,79058
chr11:1650681-1650992	chr11	+	1650707	1650937	True	NM_001012709,NM_001001480	chr11,chr11	-,+	KRTAP5-4,KRTAP5-5	-7339,95
chr2:25563099-25563370	chr2	+	25563138	25563202	True	NM_014971,NM_175630,NM_175629,NM_022552	chr2,chr2,chr2,chr2	+,-,-,-	EFR3B,DNMT3A,DNMT3A,DNMT3A	-298216,2307,2307,1622
chr5:179071553-179072185	chr5	+	179071826	179071904	True	NM_001024649,NM_001142306	chr5,chr5	+,-	CANX,C5orf60	54025,193
chr21:33649143-33649854	chr21	+	33649142	33649761	True	NM_178817,NM_018944	chr21,chr21	+,-	MRAP,MIS18A	14362,1669
chr1:45987682-45988165	chr1	+	45987791	45988136	True	NM_181696,NM_002574,NM_001202431,NM_015506,NM_181697	chr1,chr1,chr1,chr1,chr1	-,-,-,+,-	PRDX1,PRDX1,PRDX1,MMACHC,PRDX1	-181,-181,477,-21986,-181
chr9:137002153-137002525	chr9	+	137002152	137002514	True	NR_023344,NM_017588,NM_052821	chr9,chr9,chr9	-,+,+	RNU6ATAC,WDR5,WDR5	27224,-993,2399
chr2:48542785-48543169	chr2	+	48542800	48543194	True	NM_001190274,NM_002158	chr2,chr2	-,+	FBXO11,FOXN2	-409868,-1056
chr17:60448773-60449935	chr17	+	60448968	60449983	True	NM_173503,NR_027486,NM_001144933	chr17,chr17,chr17	+,-,+	EFCAB3,TBC1D3P2,EFCAB3	7930,-95952,-1451
chr1:116517045-116518849	chr1	+	116517636	116518649	True	NM_018420,NM_005599	chr1,chr1	+,-	SLC22A15,NHLH2	469,-133889
chr14:65014714-65015449	chr14	+	65015058	65015489	True	NM_006977,NM_021979,NM_172365	chr14,chr14,chr14	-,+,+	ZBTB25,HSPA2,C14orf50	-44504,-7923,1130
chr8:23104253-23104564	chr8	+	23104298	23104366	True	NM_152272,NM_003844	chr8,chr8	+,-	CHMP7,TNFRSF10A	-3199,-21618
chr20:36154768-36155852	chr20	+	36154934	36155700	True	NM_005386,NM_001167821,NM_001167820,NM_001167823,NM_001167822,NM_006698,NM_181689	chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,-,-,-,-,-,+	NNAT,BLCAP,BLCAP,BLCAP,BLCAP,BLCAP,NNAT	-5378,484,683,-1981,433,683,-5378
chr10:98121384-98122339	chr10	+	98121793	98122355	True	NM_033207,NM_001040102,NM_001040103,NM_004088	chr10,chr10,chr10,chr10	-,-,-,+	OPALIN,OPALIN,OPALIN,DNTT	-2701,-2701,-2701,-57760
chr12:71549670-71551021	chr12	+	71549962	71551069	True	NM_003667,NM_004616	chr12,chr12	+,-	LGR5,TSPAN8	282743,760
chr19:10493266-10493958	chr19	+	10493411	10493835	True	NM_001111307,NM_003331	chr19,chr19	+,-	PDE4A,TYK2	37497,-2163
chr19:1604617-1604890	chr19	+	1604822	1604884	True	NM_006830,NR_026557	chr19,chr19	-,+	UQCR11,PLK5P	649,-80795
chr17:15583105-15584193	chr17	+	15583447	15584027	True	NM_006470,NM_001130842	chr17,chr17	-,+	TRIM16,ZNF286A	2216,18863
chr17:15583105-15584193	chr17	-	18605076	18605126	False	NM_001145045,NM_001037330	chr17,chr17	-,+	ZNF286B,TRIM16L	-19504,20275
chr8:11221394-11222449	chr8	+	11221500	11222485	True	NR_026814,NM_053279	chr8,chr8	+,-	C8orf12,FAM167A	3425,101841
chr19:10363261-10364009	chr19	+	10363410	10363811	True	NM_015956,NM_146387,NM_004230,NM_146388	chr19,chr19,chr19,chr19	+,+,-,+	MRPL4,MRPL4,S1PR2,MRPL4	-821,-821,-21462,-821
chr4:44021561-44023532	chr4	+	44021912	44023562	True	NM_198353,NM_021927	chr4,chr4	-,+	KCTD8,GUF1	427322,656870
chr4:23891081-23892513	chr4	+	23891296	23892553	True	NM_003102,NM_013261	chr4,chr4	+,-	SOD3,PPARGC1A	904531,118
chr3:45643093-45643557	chr3	+	45643113	45643401	True	NM_014240,NR_033947	chr3,chr3	+,-	LIMD1,LOC644714	-6841,87023
chr6:71996477-71996885	chr6	+	71996477	71996541	True	NM_024576,NR_029598	chr6,chr6	+,-	OGFRL1,MIR30C2	1935,90243
chr11:67160673-67161040	chr11	+	67160763	67161023	True	NM_002708,NM_001008709,NM_004584,NM_206873	chr11,chr11,chr11,chr11	-,-,+,-	PPP1CA,PPP1CA,RAD9A,PPP1CA	8403,8403,-1396,8403
chr3:55520600-55520836	chr3	+	55520668	55520816	True	NM_003392,NM_001012506	chr3,chr3	-,+	WNT5A,CCDC66	565,1070367
chr4:57844589-57844904	chr4	+	57844697	57844899	True	NM_032313,NM_000938	chr4,chr4	-,+	C4orf14,POLR2B	-871,209
chr1:53164853-53165469	chr1	+	53165132	53165310	True	NM_024646,NM_023077	chr1,chr1	+,-	ZYG11B,SELRC1	26820,-1094
chr19:4559564-4559836	chr19	+	4559574	4559866	True	NM_152362,NM_032108	chr19,chr19	+,-	TNFAIP8L1,SEMA6B	79660,-15
chr15:91534568-91535038	chr15	+	91534689	91535077	True	NM_199413,NM_033544,NM_199414,NM_003981	chr15,chr15,chr15,chr15	-,+,-,-	PRC1,RCCD1,PRC1,PRC1	2777,-36635,2777,2777
chr17:41466105-41466647	chr17	+	41466366	41466626	True	NR_027412,NR_027413,NM_001661	chr17,chr17,chr17	-,-,+	LOC100130581,LOC100130581,ARL4D	-100,-100,9726
chr17:38275104-38275726	chr17	+	38275445	38275525	True	NM_001012241,NM_021724	chr17,chr17	+,-	MSL1,NR1D1	3264,-18472
chr2:113735408-113736471	chr2	+	113735417	113736293	True	NM_019618,NM_014438	chr2,chr2	+,-	IL1F9,IL1F8	12,74197
chr9:838792-839536	chr9	+	839001	839298	True	NM_021951,NM_152569	chr9,chr9	+,-	DMRT1,C9orf66	2391,-623108
chr13:21635841-21636369	chr13	+	21635882	21636166	True	NM_014572,NM_005870	chr13,chr13	-,+	LATS2,SAP18	-160,78486
chr7:65124281-65125070	chr7	+	65124514	65124731	True	NM_000181,NR_027392	chr7,chr7	-,+	GUSB,INTS4L2	322627,-11788
chr7:65124281-65125070	chr7	+	64613393	64613532	False	NR_027393,NM_001007253	chr7,chr7	+,-	INTS4L1,ERV3	-11851,-146269
chr7:65124281-65125070	chr7	-	65007749	65007966	False	NM_000181,NR_027392	chr7,chr7	-,+	GUSB,INTS4L2	439385,104810
chr21:46876971-46877197	chr21	+	46877039	46877233	True	NM_130444,NR_027498,NM_030582	chr21,chr21,chr21	+,-,+	COL18A1,NCRNA00175,COL18A1	-1666,-32054,-1666
chr12:53729854-53730070	chr12	+	53729950	53730102	True	NM_021640,NM_001173467,NM_152860	chr12,chr12,chr12	+,-,-	C12orf10,SP7,SP7	-36531,-40,-413
chr19:52409793-52409994	chr19	+	52409907	52409971	True	NM_023074,NM_001031721	chr19,chr19	-,+	ZNF649,ZNF613	-1602,20716
chr1:24644119-24645851	chr1	+	24644159	24645860	True	NM_198173,NM_021180,NM_198174,NM_001199013,NM_001195010	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	GRHL3,GRHL3,GRHL3,C1orf201,GRHL3	-49,3669,-49,94452,195
chr3:25706471-25706736	chr3	+	25706652	25706746	True	NM_001068,NM_001145391	chr3,chr3	-,+	TOP2B,OXSM	-864,124816
chr12:56138840-56139305	chr12	+	56138864	56139326	True	NM_001780,NM_005811	chr12,chr12	-,+	CD63,GDF11	-15954,-1851
chr9:139256516-139256814	chr9	+	139256581	139256853	True	NM_001200003,NM_001145639,NM_001080849	chr9,chr9,chr9	+,+,-	GPSM1,GPSM1,DNLZ	-7380,-9123,1438
chr22:37639129-37639564	chr22	+	37639381	37639511	True	NM_013385,NM_002872	chr22,chr22	+,-	CYTH4,RAC2	38983,844
chrX:129311101-129312457	chrX	+	129311201	129312041	True	NM_004794,NM_145813	chrX,chrX	+,-	RAB33A,AIFM1	-5479,-11340
chr2:120517065-120517592	chr2	+	120517195	120517535	True	NM_002980,NM_002830	chr2,chr2	-,+	SCTR,PTPN4	-235167,-39
chrX:72782850-72783087	chrX	+	72783051	72783131	True	NR_029423,NM_001039840	chrX,chrX	-,+	LOC139201,CHIC1	-130,-118
chr17:42289679-42290046	chr17	+	42289686	42289852	True	NM_001076683,NM_001076684,NM_177441,NM_014233	chr17,chr17,chr17,chr17	-,-,+,-	UBTF,UBTF,TMUB2,UBTF	8448,7122,-25163,5862
chr11:31832282-31832705	chr11	+	31832349	31832701	True	NM_001127612,NM_000280,NM_001604,NR_033971	chr11,chr11,chr11,chr11	-,-,-,+	PAX6,PAX6,PAX6,DKFZp686K1684	6858,228,228,5412
chr6:134212989-134213987	chr6	+	134213072	134214006	True	NM_003206,NM_145176,NM_198392	chr6,chr6,chr6	+,-,+	TCF21,SLC2A12,TCF21	-2868,159833,-2869
chr1:119961567-119962573	chr1	+	119961615	119962573	True	NM_000198,NR_036540,NM_001166120	chr1,chr1,chr1	+,-,+	HSD3B2,LOC644242,HSD3B2	-3936,179391,-4125
chr14:50699561-50700140	chr14	+	50699686	50700170	True	NM_006939,NM_015684	chr14,chr14	-,+	SOS2,ATP5S	-1587,78876
chr22:42344709-42345623	chr22	+	42345257	42345601	True	NM_024053,NM_001002876,NR_024355,NM_001110215	chr22,chr22,chr22,chr22	-,-,+,-	CENPM,CENPM,LOC339674,CENPM	-2109,-2109,2589,-9034
chr3:50382490-50382888	chr3	+	50382579	50382923	True	NM_015896,NM_007022,NM_006545,NM_170712,NM_170713,NM_007182,NM_170714	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-,-	ZMYND10,CYB561D2,NPRL2,RASSF1,RASSF1,RASSF1,RASSF1	283,5373,5613,-6915,-7684,-4212,-4212
chr15:58724669-58725463	chr15	+	58724754	58725457	True	NR_002927,NM_000236	chr15,chr15	-,+	HSP90AB4P,LIPC	259921,-641
chr9:139137714-139138070	chr9	+	139137934	139138036	True	NM_015597,NM_181701	chr9,chr9	+,-	GPSM1,QSOX2	83895,-247
chr21:37434221-37434964	chr21	+	37434222	37434746	True	NM_017438,NM_001007259,NM_001757	chr21,chr21,chr21	-,-,+	SETD4,SETD4,CBR1	-1406,-1611,7538
chrX:49395667-49396135	chrX	+	49395671	49395928	True	NM_003785,NM_001468	chrX,chrX	-,+	PAGE1,GAGE1	64726,-32106
chr7:43769471-43771296	chr7	+	43769549	43771056	True	NM_000712,NM_018224	chr7,chr7	+,-	BLVRA,C7orf44	27215,-466
chr20:824502-824862	chr20	+	824550	824714	True	NM_031424,NM_207121,NM_015985	chr20,chr20,chr20	+,+,-	FAM110A,FAM110A,ANGPT4	570,-7890,72296
chr7:65667867-65668563	chr7	+	65668380	65668466	True	NR_026873,NM_003596	chr7,chr7	-,+	NCRNA00174,TPST1	196993,1792
chr4:57303086-57303707	chr4	+	57303286	57303661	True	NM_001079524,NM_001079525,NM_006452,NM_002703	chr4,chr4,chr4,chr4	+,+,+,-	PAICS,PAICS,PAICS,PPAT	-1068,-1068,-1422,-1484
chr15:45803840-45804788	chr15	+	45803974	45804663	True	NR_022014,NM_013309	chr15,chr15	+,-	HMGN2P46,SLC30A4	-691,10390
chr14:36988227-36988773	chr14	+	36988519	36988735	True	NM_003317,NM_006194,NM_001101341,NM_001079668	chr14,chr14,chr14,chr14	-,+,-,-	NKX2-1,PAX9,SFTA3,NKX2-1	218,138037,-5529,745
chr14:102431525-102431793	chr14	+	102431687	102431763	True	NM_001376,NM_005348	chr14,chr14	+,-	DYNC1H1,HSP90AA1	-873,121799
chr4:668936-669319	chr4	+	669203	669281	True	NM_002477,NM_007100,NR_033743	chr4,chr4,chr4	+,-,-	MYL5,ATP5I,ATP5I	2429,-1076,-1076
chr7:50354681-50355438	chr7	+	50354731	50355458	True	NM_001042762,NM_006060	chr7,chr7	-,+	FIGNL1,IKZF1	162683,-10405
chr18:10541353-10543035	chr18	+	10541516	10542864	True	NM_003826,NM_022068	chr18,chr18	+,-	NAPG,FAM38B	-15694,605955
chr3:160938100-160938586	chr3	+	160938145	160938557	True	NM_015938,NM_033168	chr3,chr3	+,-	NMD3,B3GALNT1	541,-114985
chr14:75388206-75389071	chr14	+	75388327	75388945	True	NM_031464,NR_033814	chr14,chr14	-,+	RPS6KL1,DLST	250,-39784
chr10:105612911-105613363	chr10	+	105612933	105613319	True	NM_014631,NM_014720	chr10,chr10	-,+	SH3PXD2A,SLK	1895,114150
chrX:48273243-48274467	chrX	+	48273805	48274145	True	NM_175729,NM_001040612,NM_005636,NM_001034832	chrX,chrX,chrX,chrX	-,-,-,-	SSX4,SSX4B,SSX4,SSX4B	-2461,-2461,-2461,-2461
chrX:48273243-48274467	chrX	-	48240197	48240537	False	NM_175729,NM_175711,NM_001040612,NM_005636,NM_001034832	chrX,chrX,chrX,chrX,chrX	+,-,+,+,+	SSX4,SSX3,SSX4B,SSX4,SSX4B	2430,-24055,2430,2430,2430
chr19:56461639-56462298	chr19	+	56461813	56462087	True	NM_176810,NM_176811	chr19,chr19	-,+	NLRP13,NLRP8	-18111,-2666
chr19:46296146-46297666	chr19	+	46296308	46297336	True	NM_004943,NM_004497	chr19,chr19	-,+	DMWD,FOXA3	-248,70181
chr11:66487378-66487905	chr11	+	66487505	66487903	True	NM_024650,NM_006946	chr11,chr11	+,-	C11orf80,SPTBN2	24303,1017
chr9:130373890-130374304	chr9	+	130373955	130374177	True	NM_003165,NM_001032221,NM_001035534	chr9,chr9,chr9	+,+,-	STXBP1,STXBP1,FAM129B	308,308,-32687
chr16:22388650-22390003	chr16	+	22388838	22389395	True	NM_001802,NR_027154	chr16,chr16	-,+	CDR2,LOC641298	-2900,58933
chr2:28718669-28719242	chr2	+	28718706	28719192	True	NM_017910,NM_153021,NM_001170585	chr2,chr2,chr2	-,+,+	TRMT61B,PLB1,PLB1	374033,23,23
chr17:20945336-20945547	chr17	+	20945370	20945576	True	NM_015276,NM_015510	chr17,chr17	-,+	USP22,DHRS7B	826,84681
chrX:23930361-23931599	chrX	+	23930387	23931251	True	NM_024122,NM_001169574,NR_026545,NM_152761	chrX,chrX,chrX,chrX	-,+,-,+	APOO,CXorf58,APOO,CXorf58	-4330,-4326,-4330,-4326
chr5:173940874-173941735	chr5	+	173941050	173941760	True	NM_138369,NM_002449	chr5,chr5	-,+	BOD1,MSX2	-897384,209814
chr1:28907635-28908044	chr1	+	28907714	28907956	True	NR_024127,NR_002987,NR_003077,NM_152304,NR_002976,NR_003035	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,-	SNHG12,SNORA61,SNORD99,RAB42,SNORA44,SNORA16A	460,-1309,-2380,10755,-690,-149
chrX:111902752-111903643	chrX	+	111902999	111903643	True	NM_001004308,NM_178175	chrX,chrX	+,-	ZCCHC16,LHFPL1	-576797,19782
chrX:102766611-102767538	chrX	+	102766948	102767446	True	NM_001006935,NM_080879	chrX,chrX	+,-	TCEAL4,RAB40A	72972,7026
chr9:18485220-18487022	chr9	+	18485357	18486925	True	NM_153707,NM_001040272	chr9,chr9	-,+	FAM154A,ADAMTSL1	546389,-11305
chr18:272688-273345	chr18	+	272690	273247	True	NM_005131,NM_005151	chr18,chr18	-,+	THOC1,USP14	-4631,-114266
chr11:63682325-63682979	chr11	+	63682371	63682783	True	NM_024771,NM_173587	chr11,chr11	+,-	NAA40,RCOR2	23658,1583
chr17:78966481-78966916	chr17	+	78966496	78966952	True	NR_026857,NM_024591	chr17,chr17	-,+	FLJ90757,CHMP6	41617,-906
chr8:6787785-6788268	chr8	+	6787809	6788239	True	NM_018361,NM_001926,NM_001925	chr8,chr8,chr8	+,-,-	AGPAT5,DEFA6,DEFA4	-221983,-4211,7601
chr8:36679655-36681561	chr8	+	36679658	36680997	True	NM_001031836,NR_003671	chr8,chr8	+,-	KCNU1,LOC728024	-37867,924630
chr7:76038188-76038983	chr7	+	76038198	76038865	True	NM_080744,NM_007155	chr7,chr7	-,+	SRCRB4D,ZP3	198,-11408
chr5:80529941-80530329	chr5	+	80529982	80530374	True	NM_001099736,NM_001099735,NM_001825,NR_034121	chr5,chr5,chr5,chr5	+,+,+,-	CKMT2,CKMT2,CKMT2,LOC100131067	-894,-894,-894,67064
chr4:21672571-21673741	chr4	+	21672699	21673656	True	NM_001035003,NM_145048	chr4,chr4	-,+	KCNIP4,PACRGL	25719,-970726
chr5:10634779-10635891	chr5	+	10634868	10635848	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-70484,125589
chr21:15351150-15351935	chr18	-	14180246	14180305	True	NR_026756,NM_145287	chr18,chr18	+,-	LOC284233,ZNF519	157116,-47757
chr7:150924309-150924573	chr7	+	150924356	150924596	True	NM_007189,NM_019015,NM_005692	chr7,chr7,chr7	-,+,-	ABCF2,CHPF2,ABCF2	-39,4988,-39
chr3:195871993-195872846	chr3	+	195872490	195872890	True	NR_034088,NM_001128148	chr3,chr3	+,-	LOC401109,TFRC	-3034,-63458
chr5:94846485-94846968	chr5	+	94846554	94846843	True	NM_014639,NM_198150	chr5,chr5	-,+	TTC37,ARSK	43923,43981
chr19:54665634-54666039	chr19	+	54665651	54665902	True	NM_014516,NM_024316	chr19,chr19	+,-	CNOT3,LENG1	-24266,-2205
chr6:64365275-64365841	chr6	+	64365406	64365894	True	NM_015153,NM_016571	chr6,chr6	+,-	PHF3,LGSN	-9026,-335524
chr15:34782471-34782770	chr15	+	34782470	34782606	True	NM_175741,NR_036050	chr15,chr15	+,-	C15orf55,MIR1233-1	-144455,38016
chr10:75544208-75545278	chr10	+	75544418	75545203	True	NM_015037,NM_003635,NM_203298	chr10,chr10,chr10	+,-,+	KIAA0913,NDST2,CHCHD1	401,26437,-2663
chr3:193095448-193096524	chr3	+	193095599	193096561	True	NR_026877,NM_198505	chr3,chr3	+,-	MGC2889,ATP13A5	-136082,3
chrX:114525658-114525909	chrX	+	114525659	114525783	True	NM_016383,NM_020871	chrX,chrX	+,-	LUZP4,LRCH2	-1418,-57024
chr19:4538804-4539710	chr19	+	4538960	4539672	True	NM_052972,NM_032631,NM_001013706	chr19,chr19,chr19	-,+,-	LRG1,HDGFRP2,PLIN5	414,-66756,-3752
chr17:37009326-37009839	chr17	+	37009435	37009745	True	NR_002576,NM_000978,NM_006148	chr17,chr17,chr17	-,-,+	SNORA21,RPL23,LASP1	-187,358,16366
chr20:13744988-13745724	chr20	+	13744989	13745506	True	NM_001039375,NM_016649	chr20,chr20	+,-	C20orf7,ESF1	20165,20077
chr13:20208514-20209117	chr13	+	20208516	20209161	True	NM_199254,NM_017520	chr13,chr13	-,+	TPTE2,MPHOSPH8	-97613,-784
chr1:170633901-170634133	chr1	+	170633962	170634132	True	NM_022716,NM_006902,NR_026957	chr1,chr1,chr1	+,+,-	PRRX1,PRRX1,LOC284688	-700,-700,-380613
chr11:47599389-47600003	chr11	+	47599402	47599944	True	NM_018095,NR_024222,NM_004551,NM_001164379,NM_016506	chr11,chr11,chr11,chr11,chr11	-,-,+,+,-	KBTBD4,KBTBD4,NDUFS3,FAM180B,KBTBD4	673,673,617,8285,627
chr9:115874719-115875217	chr9	+	115874870	115875175	True	NR_024376,NR_024366	chr9,chr9	-,+	NCRNA00256B,NCRNA00256A	-913,0
chr19:51145945-51146482	chr19	+	51146150	51146358	True	NM_032298,NM_001195076,NM_001160329,NM_001160328	chr19,chr19,chr19,chr19	-,+,-,-	SYT3,LOC342918,SYT3,SYT3	-4848,6343,-3058,-3058
chr18:44334780-44335046	chr18	+	44334912	44335094	True	NM_013305,NM_031303	chr18,chr18	-,+	ST8SIA5,KATNAL2	1995,191692
chr2:105652651-105653940	chr2	+	105652758	105653955	True	NR_037883,NM_182640	chr2,chr2	-,+	LOC100506421,MRPS9	-184824,527
chr11:58673631-58674113	chr11	+	58673734	58674016	True	NM_145016,NM_080661	chr11,chr11	-,+	GLYATL2,GLYATL1	-61737,36705
chr8:22022191-22022432	chr8	+	22022195	22022441	True	NM_139278,NM_001199,NM_001172357,NR_033403,NR_033404,NM_001172410,NM_006129,NM_003018	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,+,+,+,+,+,+,+	LGI3,BMP1,SFTPC,BMP1,BMP1,SFTPC,BMP1,SFTPC	-7851,211,-3062,211,211,-3062,211,-3062
chr2:81778529-81779291	chr2	+	81778530	81779014	True	NR_033423,NM_178839	chr2,chr2	+,-	LOC1720,LRRTM1	1304912,-1247043
chr10:95720145-95720841	chr10	+	95720252	95720868	True	NR_002319,NM_016341	chr10,chr10	-,+	PIPSL,PLCE1	854,32877
chr17:5188054-5189510	chr17	+	5188082	5189420	True	NM_207103,NM_004703,NM_001083585	chr17,chr17,chr17	-,+,+	C17orf87,RABEP1,RABEP1	-49999,-2584,-2584
chr7:66389989-66390921	chr7	+	66390286	66390578	True	NM_017994,NM_016038	chr7,chr7	+,-	C7orf42,SBDS	-4144,70062
chr17:62080112-62080656	chr17	+	62080154	62080585	True	NM_001164257,NM_000873,NM_001191031,NM_001191030,NM_001191029	chr17,chr17,chr17,chr17,chr17	+,-,+,+,+	C17orf72,ICAM2,C17orf72,C17orf72,C17orf72	-4494,3748,-4494,-4494,-4494
chr9:103493576-103494054	chr9	+	103493740	103494084	True	NM_017746,NM_001018116	chr9,chr9	-,+	TEX10,MURC	-378481,-153455
chr13:50201525-50201814	chr13	+	50201552	50201711	True	NM_138450,NM_018191	chr13,chr13	+,-	ARL11,RCBTB1	723,-41833
chr12:123922184-123922578	chr12	+	123922231	123922393	True	NM_145058,NM_022717	chr12,chr12	-,+	RILPL2,SNRNP35	-967,20257
chr12:132903520-132903899	chr12	+	132903712	132903945	True	NM_001122636,NR_024563	chr12,chr12	-,+	GALNT9,LOC100130238	2010,-51786
chr6:117591694-117592064	chr6	+	117591983	117592049	True	NM_002944,NM_182645,NM_153453	chr6,chr6,chr6	-,+,+	ROS1,VGLL2,VGLL2	155019,-5297,-5313
chr5:133704232-133704575	chr5	+	133704377	133704467	True	NM_016508,NM_003337,NM_001113575	chr5,chr5,chr5	-,+,-	CDKL3,UBE2B,CDKL3	-1612,2402,-1612
chr10:23633688-23634139	chr10	+	23633725	23633990	True	NM_153714,NM_001145373	chr10,chr10	-,+	C10orf67,OTUD1	29,94207
chr9:38392782-38393174	chr9	+	38393012	38393204	True	NM_001007563,NM_000692	chr9,chr9	-,+	IGFBPL1,ALDH1B1	31290,-361
chrX:30587849-30589017	chrX	+	30588223	30589023	True	NM_000167,NM_025159	chrX,chrX	+,-	GK,CXorf21	82452,7060
chr18:77905446-77905789	chr18	+	77905551	77905775	True	NM_032510,NR_028339	chr18,chr18	-,+	PARD6G,LOC100130522	99672,31
chr19:19499159-19500730	chr19	+	19499392	19500348	True	NM_172231,NM_017660	chr19,chr19	-,+	SUGP1,GATAD2A	-68085,-2801
chr19:46733744-46734373	chr19	+	46733789	46734249	True	NM_198541,NM_207393	chr19,chr19	+,-	IGFL1,IGFL3	-831,-105858
chr15:78833289-78834018	chr15	+	78833332	78833846	True	NM_001166694,NM_001102668,NM_002789,NM_001102667	chr15,chr15,chr15,chr15	-,+,+,+	CHRNA3,PSMA4,PSMA4,PSMA4	79841,-636,-636,-636
chr10:126151018-126151357	chr10	+	126151201	126151270	True	NM_001146340,NM_022126,NM_001167880	chr10,chr10,chr10	-,+,+	NKX1-2,LHPP,LHPP	-12651,-917,-917
chrX:46405504-46406876	chrX	+	46405589	46406731	True	NM_001039891,NR_015378,NM_001190417,NM_001146291	chrX,chrX,chrX,chrX	-,+,-,-	ZNF674,LOC401588,ZNF674,ZNF674	-697,-712,-697,-697
chr2:153551054-153552722	chr2	+	153551080	153552733	True	NM_152522,NM_017892	chr2,chr2	+,-	ARL6IP6,PRPF40A	21689,21292
chr12:54411471-54411751	chr12	+	54411501	54411573	True	NM_014620,NR_003716,NM_022658,NM_153693,NR_003084	chr12,chr12,chr12,chr12,chr12	+,-,+,+,+	HOXC4,HOTAIR,HOXC8,HOXC6,HOXC5	-910,-48986,-8662,-910,-910
chr6:26247182-26247498	chr6	+	26247225	26247460	True	NM_003547,NM_021018,NM_003540,NM_003524	chr6,chr6,chr6,chr6	-,-,+,+	HIST1H4G,HIST1H3F,HIST1H4F,HIST1H2BH	-20,3433,-6626,4418
chr8:74659687-74660055	chr8	+	74659692	74660065	True	NM_001164381,NM_001164380,NM_001164383,NM_001164382,NM_001164385,NM_001164384,NM_001040613,NM_014393	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,-,-,+,-	STAU2,STAU2,STAU2,STAU2,STAU2,STAU2,TMEM70,STAU2	-530,-530,-530,-530,-530,-27,228311,-530
chr12:45585860-45587624	chr12	+	45585860	45587303	True	NM_001025356,NR_001571	chr12,chr12	+,-	ANO6,RNY5	22466,-4608
chr10:45474167-45475129	chr10	+	45474242	45474938	True	NM_007021,NM_032023	chr10,chr10	-,+	C10orf10,RASSF4	48,-19074
chr17:76208943-76209713	chr17	+	76209384	76209738	True	NM_001168,NR_002219,NM_001012271,NM_001012270	chr17,chr17,chr17,chr17	+,-,+,+	BIRC5,EPR1,BIRC5,BIRC5	538,11095,538,538
chr7:95951517-95952028	chr7	+	95951805	95952039	True	NR_027662,NM_004411,NM_014251,NM_001160210	chr7,chr7,chr7,chr7	-,+,-,-	SLC25A13,DYNC1I1,SLC25A13,SLC25A13	-346,-550038,-346,-346
chr9:95148006-95148849	chr9	+	95148005	95148882	True	NM_001012267,NM_014057	chr9,chr9	+,-	CENPP,OGN	-60315,18106
chr10:38665693-38667503	chr10	+	38666042	38667372	True	NR_027269,NR_003086	chr10,chr10	-,+	SEPT7L,HSD17B7P2	24458,-20796
chr10:38665693-38667503	chr1	+	162781434	162782547	False	NM_178550,NM_016371	chr1,chr1	-,+	C1orf110,HSD17B7	56108,-20989
chr8:53321680-53322475	chr8	+	53321780	53322468	True	NM_014682,NM_005285	chr8,chr8	-,+	ST18,NPBWR1	21,529999
chr7:6684673-6684967	chr7	+	6684694	6684766	True	NM_017560,NM_006956	chr7,chr7	+,-	ZNF853,ZNF12	-29218,61850
chr16:66914302-66914508	chr16	+	66914314	66914508	True	NM_020786,NM_001204744	chr16,chr16	+,-	PDP2,CDH16	-4,38429
chr2:95870945-95871701	chr2	+	95871090	95871702	True	NM_021088,NM_032788	chr2,chr2	+,-	ZNF2,ZNF514	-39958,-45827
chr5:132361366-132361848	chr5	+	132361484	132361844	True	NM_017665,NM_002154	chr5,chr5	-,+	ZCCHC10,HSPA4	446,25817
chr4:153604123-153604875	chr4	+	153604325	153604737	True	NM_152680,NM_001025593	chr4,chr4	-,+	TMEM154,ARFIP1	-3008,96374
chr8:28560721-28562346	chr8	+	28560851	28561900	True	NM_001172562,NM_001440	chr8,chr8	-,+	INTS9,EXTL3	185585,-1754
chr8:143808914-143809216	chr8	+	143808942	143809222	True	NM_016647,NM_020427	chr8,chr8	+,-	C8orf55,SLURP1	-372,14657
chr12:7039364-7039813	chr12	+	7039376	7039572	True	NM_001940,NM_001007026,NR_003010	chr12,chr12,chr12	+,+,-	ATN1,ATN1,SCARNA12	-1947,-5801,37247
chr5:140098059-140098494	chr5	+	140098149	140098533	True	NR_026705,NR_026704,NM_002109,NR_026703	chr5,chr5,chr5,chr5	+,+,-,+	VTRNA1-3,VTRNA1-2,HARS,VTRNA1-1	7210,0,-27178,-7339
chrX:114423248-114423905	chrX	+	114423408	114423879	True	NM_001145346,NM_020871	chrX,chrX	+,-	RBMXL3,LRCH2	83,44809
chr2:178195779-178196362	chr2	+	178195934	178196410	True	NM_003659,NR_026966	chr2,chr2	+,-	AGPS,LOC100130691	61060,61059
chr19:36240293-36240627	chr19	+	36240330	36240420	True	NM_144987,NM_001040425,NM_024660,NM_001039887,NM_144617,NM_172341,NM_019104	chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,+,-,+,+	U2AF1L4,U2AF1L4,IGFLR1,C19orf55,HSPB6,PSENEN,LIN37	-3994,-3994,-6979,8623,7560,-3897,-879
chr15:74284006-74284275	chr15	+	74284088	74284204	True	NM_004809,NM_033238,NM_033239,NM_033250,NM_002675,NM_033247,NM_033246,NM_033244,NM_033240,NM_033249	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,+,+,+,+,+,+,+,+,+	STOML1,PML,PML,PML,PML,PML,PML,PML,PML,PML	481,2809,2809,2809,2809,2809,2809,2809,2809,2809
chr16:23197032-23197239	chr16	+	23197034	23197174	True	NM_001039,NM_020718	chr16,chr16	+,-	SCNN1G,USP31	-3046,-36443
chr11:120212032-120213195	chr11	+	120212227	120213141	True	NM_012101,NM_001198665,NM_015313	chr11,chr11,chr11	-,+,+	TRIM29,ARHGEF12,ARHGEF12	-203364,-4668,-4668
chr15:72402706-72403220	chr15	+	72402915	72403230	True	NM_145204,NM_006901,NM_001172109,NM_001166340,NM_001172111,NM_001172110	chr15,chr15,chr15,chr15,chr15,chr15	+,-,+,+,+,+	SENP8,MYO9A,SENP8,SENP8,SENP8,SENP8	7400,7247,5961,3368,7400,6015
chr12:56123183-56123772	chr12	+	56123341	56123799	True	NM_002905,NM_001780,NM_001199771,NM_001040034	chr12,chr12,chr12,chr12	+,-,+,-	RDH5,CD63,RDH5,CD63	-9241,-431,-9241,-431
chr15:34321601-34322705	chr15	+	34321845	34322526	True	NM_020371,NM_012125	chr15,chr15	-,+	AVEN,CHRM5	8838,-60813
chr2:32390461-32390818	chr2	+	32390650	32390723	True	NM_017964,NM_001193513,NM_001199138,NM_001193514,NM_001193515	chr2,chr2,chr2,chr2,chr2	+,+,-,+,+	SLC30A6,SLC30A6,NLRC4,SLC30A6,SLC30A6	186,186,99277,186,186
chr18:44656613-44657507	chr18	+	44656649	44657333	True	NM_032124,NM_031303	chr18,chr18	-,+	HDHD2,KATNAL2	19600,-129913
chr5:114515624-114515873	chr5	+	114515652	114515794	True	NM_001284,NM_001017398,NM_001017397,NM_018700	chr5,chr5,chr5,chr5	+,-,-,-	AP3S1,TRIM36,TRIM36,TRIM36	661824,499,499,499
chrX:74314470-74316182	chrX	+	74315013	74316173	True	NM_145052,NM_004299	chrX,chrX	+,-	UPRT,ABCB7	177720,60017
chr9:33951435-33953160	chr9	+	33951719	33952860	True	NR_003685,NR_003690	chr9,chr9	-,+	SNORD121A,SNORD121B	57,-17487
chr9:132403042-132403251	chr9	+	132403047	132403287	True	NM_014064,NM_017873,NM_001202403,NM_177999	chr9,chr9,chr9,chr9	+,-,-,-	METTL11A,ASB6,ASB6,ASB6	-14663,1211,1211,1211
chr7:23335534-23336253	chr7	+	23335564	23336043	True	NM_138446,NM_006547	chr7,chr7	+,-	C7orf30,IGF2BP3	2896,174003
chr16:33942921-33943208	chr16	+	33943084	33943222	True	NR_027080,NR_002837	chr16,chr16	+,-	LOC283914,UBE2MP1	654564,461590
chr16:79729581-79730943	chr16	+	79729716	79730981	True	NM_005360,NM_130897	chr16,chr16	-,+	MAF,DYNLRB2	-95094,843872
chr5:180327212-180327540	chr5	+	180327214	180327572	True	NM_001159710,NM_024850,NM_001040462,NM_001159709,NM_001159708,NM_001159707,NM_152283	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,-	BTNL8,BTNL8,BTNL8,BTNL8,BTNL8,BTNL8,ZFP62	8991,-1188,-1188,-1188,-1188,-1188,-38928
chr17:205228-206576	chr17	+	205273	206505	True	NM_001190412,NM_001190413,NM_001190411,NM_001013672,NM_006987	chr17,chr17,chr17,chr17,chr17	-,-,-,+,-	RPH3AL,RPH3AL,RPH3AL,C17orf97,RPH3AL	-2640,-2640,-2640,53612,-2640
chr1:116386242-116387055	chr1	+	116386241	116387072	True	NM_018420,NM_001111061,NM_005599	chr1,chr1,chr1	+,-,-	SLC22A15,NHLH2,NHLH2	132046,-2908,-2494
chr3:119186846-119187681	chr3	+	119187200	119187584	True	NM_018266,NM_152305,NR_024265	chr3,chr3,chr3	-,+,+	TMEM39A,POGLUT1,POGLUT1	-4729,200,200
chr2:99950674-99951305	chr2	+	99950880	99951127	True	NM_015904,NM_005783	chr2,chr2	+,-	EIF5B,TXNDC9	2706,1794
chr3:115509672-115510289	chr3	+	115509695	115510239	True	NM_002045,NM_015642	chr3,chr3	+,-	GAP43,ZBTB20	-167603,-643568
chr2:224909025-224910267	chr2	+	224909342	224909964	True	NM_022915,NM_001136530,NM_006216,NM_001136528	chr2,chr2,chr2,chr2	+,-,-,-	MRPL44,SERPINE2,SERPINE2,SERPINE2	-87275,-5985,-5306,-5306
chr7:143632981-143633368	chr7	+	143633053	143633397	True	NM_014719,NM_001004685	chr7,chr7	-,+	FAM115A,OR2F2	-33881,-778
chr15:91475001-91475631	chr15	+	91475275	91475573	True	NM_018671,NM_198527,NM_001039675	chr15,chr15,chr15	+,-,+	UNC45A,HDDC3,UNC45A	2641,251,-1916
chr12:44256971-44257720	chr12	+	44257122	44257507	True	NM_002822,NM_032256	chr12,chr12	-,+	TWF1,TMEM117	-56944,-27211
chr12:53014047-53014533	chr12	+	53014254	53014580	True	NM_002284,NM_175068	chr12,chr12	+,-	KRT86,KRT73	-318658,-1911
chr9:73483937-73484211	chr9	+	73483954	73484200	True	NM_024971,NM_020952,NM_015110,NM_001007470,NM_206948,NM_206946,NM_206947,NM_206944,NM_206945	chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,-,+,-,-,-,-,-,-	TRPM3,TRPM3,SMC5,TRPM3,TRPM3,TRPM3,TRPM3,TRPM3,TRPM3	0,0,-610129,0,0,0,0,0,0
chr19:42569474-42569915	chr19	+	42569485	42569873	True	NM_022752,NM_002088	chr19,chr19	+,-	ZNF574,GRIK5	10416,134
chrX:70434404-70434649	chrX	+	70434406	70434698	True	NM_000166,NM_001097642,NM_201599	chrX,chrX,chrX	+,+,-	GJB1,GJB1,ZMYM3	8357,363,39390
chr17:48291933-48292984	chr17	+	48291997	48293008	True	NM_001135697,NM_000088	chr17,chr17	+,-	SGCA,COL1A1	-48682,-12997
chr19:36301716-36303280	chr19	+	36301737	36303070	True	NM_052948,NM_021232	chr19,chr19	+,-	ARHGAP33,PRODH2	-35379,1181
chr1:114353654-114354097	chr1	+	114353683	114354083	True	NR_037864,NM_018364	chr1,chr1	+,-	LOC100287722,RSBN1	45173,1037
chr20:13204579-13205583	chr20	+	13204586	13205205	True	NM_080826,NM_017714	chr20,chr20	+,-	ISM1,TASP1	-2219,414439
chr11:117859769-117860255	chr11	+	117859784	117860256	True	NR_026691,NM_001077263,NM_001558	chr11,chr11,chr11	+,-,+	IL10RA,TMPRSS13,IL10RA	-2730,-59669,-2730
chrX:142966870-142967874	chrX	+	142967001	142967904	True	NM_001009615,NM_001012989	chrX,chrX	-,+	SPANXN2,UBE2NL	-162485,-33
chr17:42440220-42440521	chr17	+	42440308	42440376	True	NM_198475,NM_002087	chr17,chr17	-,+	FAM171A2,GRN	909,-17868
chr8:37758827-37759804	chr8	+	37758830	37759848	True	NM_001002814,NM_025151,NM_032777	chr8,chr8,chr8	-,-,+	RAB11FIP1,RAB11FIP1,GPR124	-1815,-1815,-104480
chr17:46126296-46126913	chr17	+	46126331	46126709	True	NM_003204,NM_016429	chr17,chr17	+,-	NFE2L1,COPZ2	-696,-11179
chr15:64444307-64444547	chr15	+	64444335	64444529	True	NM_024798,NM_000942	chr15,chr15	+,-	SNX22,PPIB	-470,10875
chr17:34954552-34955274	chr17	+	34954635	34955232	True	NM_024864,NM_001033580,NM_024308	chr17,chr17,chr17	+,-,+	MRM1,MYO19,DHRS11	2792,-63330,-6460
chr4:152083501-152083885	chr4	+	152083559	152083753	True	NR_000007,NM_001128924	chr4,chr4	+,-	SNORD73A,SH3D19	-58638,13003
chr1:153585512-153587369	chr1	+	153585834	153587059	True	NM_080388,NM_006271,NM_020672	chr1,chr1,chr1	-,+,-	S100A16,S100A1,S100A14	-320,13813,1788
chr6:14819835-14820669	chr6	+	14819947	14820491	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	426035,842848
chr9:67289057-67290049	chr9	+	67289222	67289896	True	NM_032250,NR_002817	chr9,chr9	+,-	ANKRD20A1,AQP7P1	636864,44
chr9:67289057-67290049	chr9	+	69651355	69651847	False	NM_001085457,NR_024443	chr9,chr9	-,+	CBWD6,LOC100133920	-388762,-45
chr9:67289057-67290049	chr9	-	67030495	67030987	False	NR_024443,NR_024496	chr9,chr9	-,+	LOC100133920,LOC442421	45,-536277
chr9:67289057-67290049	chr9	+	33403031	33403081	False	NM_001170,NM_002504	chr9,chr9	-,+	AQP7,NFX1	-514,-112664
chr9:67289057-67290049	chr9	-	42857506	42857998	False	NR_026759,NR_026558	chr9,chr9	-,+	FAM95B1,AQP7P3	175364,153
chr13:51709240-51710101	chr13	+	51709317	51710138	True	NR_003923,NM_145019	chr13,chr13	-,+	GUCY1B2,FAM124A	-69024,86368
chr20:35921514-35922415	chr20	+	35921825	35922371	True	NM_022077,NM_021081,NM_001003897	chr20,chr20,chr20	+,-,+	MANBAL,GHRH,MANBAL	-3825,-36526,-3825
chr4:53730952-53731653	chr4	+	53731070	53731608	True	NM_022832,NM_023940	chr4,chr4	-,+	USP46,RASL11B	-205568,-2634
chr6:31169140-31170239	chr6_dbb_hap3	+	2467209	2467279	False	NR_026816,NR_026791	chr6_dbb_hap3,chr6_dbb_hap3	-,+	PSORS1C3,HCG27	-24391,-4583
chr6:31169140-31170239	chr6	+	31169978	31170142	True	NR_026816,NR_026791	chr6,chr6	-,+	PSORS1C3,HCG27	-24302,-4492
chr6:31169140-31170239	chr6_ssto_hap7	+	2505014	2505084	False	NR_026816,NR_026791	chr6_ssto_hap7,chr6_ssto_hap7	-,+	PSORS1C3,HCG27	-24384,-4583
chr6:31169140-31170239	chr6_cox_hap2	+	2684842	2684912	False	NR_026816,NR_026791	chr6_cox_hap2,chr6_cox_hap2	-,+	PSORS1C3,HCG27	-24395,-4583
chr19:36104784-36105694	chr19	+	36104957	36105743	True	NM_000704,NM_015302	chr19,chr19	-,+	ATP4A,HAUS5	-50397,-1375
chr13:103054154-103054741	chr13	+	103054214	103054618	True	NR_036487,NR_036486,NM_175929	chr13,chr13,chr13	+,-,-	LOC283481,LOC283480,FGF14	-7347,-7345,-90
chr11:5615628-5616891	chr11	+	5615867	5616927	True	NM_001003819,NM_001003818,NM_001005289,NM_001198645,NM_001198644,NM_058166	chr11,chr11,chr11,chr11,chr11,chr11	+,+,-,+,+,+	TRIM6-TRIM34,TRIM6,OR52H1,TRIM6,TRIM6,TRIM6	937,937,-49114,937,937,403
chr2:101869585-101870299	chr2	+	101869949	101870271	True	NR_003070,NM_017546	chr2,chr2	-,+	SNORD89,C2orf29	19290,-655
chr1:204379710-204379945	chr1	+	204379778	204379944	True	NM_001204171,NM_032833	chr1,chr1	+,-	MDM4,PPP1R15B	105562,1050
chr11:108094067-108095809	chr11	+	108094142	108095837	True	NM_000051,NM_002519	chr11,chr11	+,-	ATM,NPAT	-640,-777
chr11:74094685-74095510	chr11	+	74095089	74095542	True	NM_173582,NM_006591	chr11,chr11	-,+	PGM2L1,POLD3	14012,208086
chr6:96970088-96970472	chr6	+	96970165	96970465	True	NM_001143957,NM_015323	chr6,chr6	-,+	GPR63,KIAA0776	314944,-516
chr7:8472688-8473204	chr7	+	8472691	8473168	True	NM_004968,NM_152745	chr7,chr7	-,+	ICA1,NXPH1	-170506,416
chr19:34859623-34860239	chr19	+	34859628	34860285	True	NR_027620,NM_001184722,NM_000175	chr19,chr19,chr19	-,+,+	LOC643719,GPI,GPI	208361,-4034,-3647
chr16:16043776-16044410	chr16	+	16043893	16044360	True	NM_019900,NM_144600,NM_004996,NM_019862,NM_019898,NM_019899	chr16,chr16,chr16,chr16,chr16,chr16	+,-,+,+,+,+	ABCC1,FOPNL,ABCC1,ABCC1,ABCC1,ABCC1	-510,-61446,-510,-510,-510,-510
chr5:135073018-135073388	chr5	+	135073175	135073432	True	NM_145282,NR_027127	chr5,chr5	+,-	SLC25A48,LOC340074	96932,-83551
chr19:50381292-50382201	chr19	+	50381402	50382227	True	NM_001168222,NM_024682,NM_032375,NM_001098633,NM_001098632	chr19,chr19,chr19,chr19,chr19	+,+,-,-,-	TBC1D17,TBC1D17,AKT1S1,AKT1S1,AKT1S1	-771,-771,-824,-790,-758
chr2:98328283-98328709	chr2	+	98328401	98328517	True	NM_001079,NM_005735	chr2,chr2	+,-	ZAP70,ACTR1B	1513,-47840
chr1:22139505-22140522	chr1	+	22139845	22140247	True	NM_001032730,NM_001013693	chr1,chr1	-,+	USP48,LDLRAD2	-30157,-1138
chr19:5837699-5837953	chr19	+	5837802	5837994	True	NM_001040701,NM_000150,NM_004558	chr19,chr19,chr19	-,-,+	FUT6,FUT6,NRTN	1798,1798,-14036
chr7:99570662-99570882	chr7	+	99570812	99570886	True	NM_001185,NR_036679	chr7,chr7	-,+	AZGP1,AZGP1P1	2899,7498
chr12:51844741-51844989	chr12	+	51844866	51845008	True	NM_001039960,NM_007210	chr12,chr12	+,-	SLC4A8,GALNT6	-26324,-59666
chr14:37126038-37126313	chr14	+	37126097	37126324	True	NM_006194,NM_014360	chr14,chr14	+,-	PAX9,NKX2-8	448,-74311
chr14:41126395-41126863	chr14	+	41126484	41126751	True	NM_152447,NM_203301	chr14,chr14	+,-	LRFN5,FBXO33	950012,-1224780
chr1:153606941-153607420	chr1	+	153607064	153607296	True	NM_015607,NM_001024211,NM_001024212,NM_001024213,NM_006271,NM_001024210,NM_005979	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,-,+,-,-	CHTOP,S100A13,S100A13,S100A13,S100A1,S100A13,S100A13	-590,-6947,-7320,-7540,-6242,-496,-6349
chr19:48415919-48416307	chr19	+	48416254	48416330	True	NR_024219,NR_024220,NR_024217,NR_024216,NM_003167,NR_004437,NR_004436,NR_004435	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,-,+,+,+	SNAR-C5,SNAR-C1,SNAR-C2,SNAR-A13,SULT2A1,SNAR-A12,SNAR-A2,SNAR-A1	1,1,1,-5370,-26600,-5370,5355,5355
chr19:48415919-48416307	chr19	+	48453499	48453551	False	NR_024219,NR_024221,NR_024217,NR_024216,NR_024220,NR_004437,NM_001128326	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,+,-	SNAR-C5,SNAR-C3,SNAR-C2,SNAR-A13,SNAR-C1,SNAR-A12,BSPH1	5387,1,5387,-5371,5387,-5371,41926
chr19:48415919-48416307	chr19	+	48458885	48458961	False	NR_024219,NR_024220,NM_001128326,NR_024217,NR_024221	chr19,chr19,chr19,chr19,chr19	+,+,-,+,+	SNAR-C5,SNAR-C1,BSPH1,SNAR-C2,SNAR-C3	1,1,36516,1,-5383
chr19:48415919-48416307	chr19	+	48432039	48432097	False	NR_024219,NR_024220,NR_024223,NR_024224,NR_024225,NR_024226,NR_024227,NR_024228,NR_024229,NR_024215,NR_024214,NR_024217,NM_003167,NR_004436,NR_004435,NR_024242	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,+,+,+,+,+,+,+,-,+,+,+	SNAR-C5,SNAR-C1,SNAR-A5,SNAR-A7,SNAR-A11,SNAR-A9,SNAR-A6,SNAR-A8,SNAR-A10,SNAR-A4,SNAR-A3,SNAR-C2,SULT2A1,SNAR-A2,SNAR-A1,SNAR-A14	-15,-15,-5054,-5054,-5054,-5054,-5054,-5054,-5054,-5054,-5054,-15,-42385,5340,5340,-5054
chr19:48415919-48416307	chr19	+	48442744	48442820	False	NR_024218,NR_024216,NR_004437,NM_001128326,NR_004435,NR_004436	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,-,+,+	SNAR-C4,SNAR-A13,SNAR-A12,BSPH1,SNAR-A1,SNAR-A2	1,5358,5358,52657,-5357,-5357
chr15:31616832-31617131	chr15	+	31616836	31617134	True	NM_015995,NM_002420	chr15,chr15	+,-	KLF13,TRPM1	1948,-222912
chr5:56199729-56200716	chr5	+	56199927	56200763	True	NM_153706,NM_001171990,NM_152622	chr5,chr5,chr5	+,+,-	C5orf35,C5orf35,MIER3	4323,4323,47241
chrY:23695848-23696768	chrY	+	23696402	23696470	True	NM_005058,NM_001006121,NM_001006120,NR_001537	chrY,chrY,chrY,chrY	+,+,+,-	RBMY1A1,RBMY1B,RBMY1D,TTTY13	328,294,334,60132
chrY:23695848-23696768	chrY	-	9162790	9162846	False	NR_001546,NR_001547,NM_001164471	chrY,chrY,chrY	-,-,+	TTTY20,RBMY1A3P,TSPY4	9645,-2307,32605
chrY:23695848-23696768	chrY	+	23672861	23672929	False	NM_005058,NM_001006121,NM_001006120,NR_001537,NM_001006118	chrY,chrY,chrY,chrY,chrY	+,+,+,-,+	RBMY1A1,RBMY1B,RBMY1D,TTTY13,RBMY1E	328,294,334,83673,334
chrY:23695848-23696768	chrY	-	24040967	24041035	False	NM_005058,NM_001006121,NR_001527,NM_001006120,NM_001006118	chrY,chrY,chrY,chrY,chrY	-,-,+,-,-	RBMY1A1,RBMY1B,TTTY6,RBMY1D,RBMY1E	-328,-294,250076,-334,-334
chrY:23695848-23696768	chrY	-	24064508	24064576	False	NM_001006120,NM_001006121,NR_001527,NM_001006118	chrY,chrY,chrY,chrY	-,-,+,-	RBMY1D,RBMY1B,TTTY6,RBMY1E	-334,-294,226535,-334
chr17:73399334-73399575	chr17	+	73399389	73399578	True	NR_037449,NM_002086,NM_203506	chr17,chr17,chr17	+,-,-	MIR3678,GRB2,GRB2	2571,2262,2263
chr1:149283621-149284077	chr1	+	149283807	149283950	True	NM_001024599,NR_027002	chr1,chr1	-,+	HIST2H2BF,LOC388692	115341,-4383
chr1:149283621-149284077	chr1	+	149669360	149669632	False	NM_001161334,NM_000566	chr1,chr1	-,+	HIST2H2BF,FCGR1A	114560,84617
chr8:54793003-54793292	chr8	+	54793109	54793269	True	NM_003702,NM_213619	chr8,chr8	+,-	RGS20,ATP6V1H	172,-37259
chr7:56159132-56159427	chr7	+	56159232	56159412	True	NM_015411,NM_006213	chr7,chr7	+,-	SUMF2,PHKG1	-27367,1327
chr9:112212698-112214269	chr9	+	112212699	112214251	True	NM_001145369,NM_001145370,NM_001037293	chr9,chr9,chr9	-,-,+	PTPN3,PTPN3,PALM2	43,43,188816
chr1:202896354-202896558	chr1	+	202896421	202896541	True	NR_002929,NM_021633	chr1,chr1	+,-	LOC148709,KLHL12	-65590,-50
chr1:36346554-36347013	chr1	+	36346674	36346916	True	NM_012199,NM_022111	chr1,chr1	+,-	EIF2C1,CLSPN	1893,-111123
chr15:25415397-25415618	chr15	+	25415472	25415666	True	NR_003304,NR_003298,NM_130838,NR_003301,NR_001291,NR_003302,NR_003296,NR_003297,NR_003294,NR_003295	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,-,+,+,+,+,+,+,+	SNORD115-12,SNORD115-6,UBE3A,SNORD115-9,SNORD115-1,SNORD115-10,SNORD115-4,SNORD115-5,SNORD115-2,SNORD115-3	8221,9977,235037,8221,203,8221,6312,8218,2115,4407
chr2:136506460-136507998	chr2	+	136506714	136507636	True	NM_002299,NM_014607	chr2,chr2	-,+	LCT,UBXN4	87164,-7584
chr2:180576361-180576718	chr2	+	180576363	180576744	True	NM_019091,NM_001113397	chr2,chr2	+,-	PLEKHA3,ZNF385B	-1231215,34075
chr18:70215171-70216292	chr18	+	70215177	70216105	True	NM_014177,NM_182511	chr18,chr18	+,-	C18orf55,CBLN2	1599640,-3454
chr2:107505001-107505424	chr2	+	107505227	107505301	True	NM_001142352,NM_032528,NM_001142351,NR_003506	chr2,chr2,chr2,chr2	-,-,-,+	ST6GAL2,ST6GAL2,ST6GAL2,PLGLA	-1664,-1664,-2617,-502517
chr15:90233821-90234034	chr15	+	90233828	90234070	True	NM_003847,NM_020212	chr15,chr15	-,+	PEX11A,WDR93	-46,-27
chr7:77167753-77168090	chr7	+	77167884	77168102	True	NM_001131008,NM_001131009,NM_017439,NM_002835	chr7,chr7,chr7,chr7	+,+,-,+	PTPN12,PTPN12,PION,PTPN12	-583,-583,-122167,-1162
chr2:113763755-113764034	chr2	+	113763762	113763994	True	NM_014440,NM_014438	chr2,chr2	+,-	IL1F6,IL1F8	-371,46502
chr16:12896903-12897447	chr16	+	12897112	12897314	True	NM_001145205,NM_018340,NM_001099455	chr16,chr16,chr16	+,-,-	SHISA9,CPPED1,CPPED1	98162,480,480
chr12:1702657-1703016	chr12	+	1702672	1702992	True	NM_030775,NM_152441	chr12,chr12	+,-	WNT5B,FBXL14	23229,389
chr11:111944351-111944779	chr11	+	111944413	111944708	True	NM_138789,NM_001082969,NM_018195,NM_001082619,NM_001082970	chr11,chr11,chr11,chr11,chr11	-,+,+,-,+	PIH1D2,C11orf57,C11orf57,PIH1D2,C11orf57	238,259,259,238,259
chr11:93861519-93861837	chr11	+	93861551	93861876	True	NM_015368,NM_016540	chr11,chr11	+,-	PANX1,GPR83	217,272759
chr2:20867756-20868946	chr2	+	20867870	20868780	True	NM_022460,NM_182828	chr2,chr2	-,+	HS1BP3,GDF7	-17006,-1497
chr22:37254279-37254608	chr22	+	37254359	37254471	True	NM_013416,NM_000631,NM_002854	chr22,chr22,chr22	+,+,-	NCF4,NCF4,PVALB	2558,2558,-38842
chr14:39581441-39582040	chr14	+	39581774	39581949	True	NM_006364,NM_003616,NM_001009183,NM_001009182	chr14,chr14,chr14,chr14	-,+,+,+	SEC23A,SIP1,SIP1,SIP1	-9337,1538,1538,1538
chr18:12658892-12659559	chr18	+	12658902	12659276	True	NM_147163,NM_001128626,NM_001128627,NM_020148	chr18,chr18,chr18,chr18	+,-,-,-	PSMG2,SPIRE1,SPIRE1,SPIRE1	-216,-990,-2171,-990
chr9:139222835-139223040	chr9	+	139222960	139223022	True	NM_015597,NM_001145638,NR_026964	chr9,chr9,chr9	+,+,-	GPSM1,GPSM1,LOC26102	-1079,-1079,-1181
chr10:100026989-100027328	chr10	+	100026998	100027296	True	NM_014472,NM_032211	chr10,chr10	+,-	C10orf28,LOXL4	-132668,761
chr2:162167674-162168284	chr2	+	162168004	162168137	True	NM_001935,NM_005805	chr2,chr2	-,+	DPP4,PSMD14	762980,-3277
chr14:55517713-55518133	chr14	+	55517997	55518169	True	NM_007086,NM_144578	chr14,chr14	-,+	WDHD1,MAPK1IP1L	-24178,192
chr9:132936770-132937172	chr9	+	132936781	132937156	True	NM_014286,NM_015033	chr9,chr9	+,-	NCS1,FNBP1	-1975,-131308
chr19:34175276-34175705	chr19	+	34175378	34175656	True	NM_001166057,NM_022467	chr19,chr19	-,+	PEPD,CHST8	-162579,-1
chr13:43364979-43366095	chr13	+	43365072	43365494	True	NM_001002264,NM_182508	chr13,chr13	-,+	EPSTI1,C13orf30	200933,-9444
chr11:73695285-73696228	chr11	+	73695294	73696010	True	NM_153614,NM_003355	chr11,chr11	+,-	DNAJB13,UCP2	-33981,-1405
chr20:61427412-61427710	chr20	+	61427433	61427682	True	NM_007346,NM_018270,NM_006602	chr20,chr20,chr20	+,+,-	OGFR,C20orf20,TCFL5	8494,122,65486
chr2:77745711-77746183	chr2	+	77745724	77746219	True	NM_024993,NM_001134745,NM_198448	chr2,chr2,chr2	-,-,+	LRRTM4,LRRTM4,REG3G	3334,3334,1506606
chr22:42349620-42349844	chr22	+	42349681	42349745	True	NM_024053,NM_001002876,NR_024355	chr22,chr22,chr22	-,-,+	CENPM,CENPM,LOC339674	-6533,-6533,-1541
chr19:19144735-19145243	chr19	+	19145016	19145264	True	NM_001017392,NM_014884,NM_033415,NM_001199196	chr19,chr19,chr19,chr19	-,-,+,+	SUGP2,SUGP2,ARMC6,ARMC6	-636,-636,-693,-693
chr20:3640566-3640821	chr20	+	3640566	3640762	True	NM_145762,NM_022139,NM_001197327	chr20,chr20,chr20	-,-,+	GFRA4,GFRA4,HSPA12B	3334,3334,72554
chr12:65515671-65515923	chr12	+	65515678	65515840	True	NM_001167614,NM_007191	chr12,chr12	+,-	LEMD3,WIF1	47510,-332
chr14:21059906-21061442	chr14	+	21060047	21061325	True	NM_001024822,NM_145250,NM_001012975	chr14,chr14,chr14	-,-,+	RNASE12,RNASE11,RNASE10	-1065,-1630,-81467
chr4:48909914-48911624	chr4	+	48910410	48911598	True	NM_001014446,NM_025087,NM_152398,NM_001168254	chr4,chr4,chr4,chr4	-,+,-,+	OCIAD2,CWH43,OCIAD2,OCIAD1	-1595,76666,-1595,-77138
chr8:23103793-23104135	chr8	+	23103848	23104120	True	NM_152272,NM_003844	chr8,chr8	+,-	CHMP7,TNFRSF10A	-2749,-21168
chr1:109113881-109115396	chr1	+	109113950	109115036	True	NM_001010883,NM_001102592	chr1,chr1	+,-	FAM102B,HENMT1	-11030,88758
chr12:101589770-101590773	chr12	+	101589988	101590671	True	NM_014503,NM_145913	chr12,chr12	+,-	UTP20,SLC5A8	83233,13395
chr1:40506671-40506957	chr1	+	40506782	40506958	True	NM_006367,NM_000310,NM_001105530	chr1,chr1,chr1	+,-,+	CAP1,PPT1,CAP1	-578,56234,-578
chr14:96668051-96668271	chr14	+	96668136	96668298	True	NM_000623,NM_018036	chr14,chr14	+,-	BDKRB2,ATG2B	2836,161430
chr2:113031861-113032889	chr2	+	113032006	113032906	True	NM_198581,NM_032494	chr2,chr2	+,-	ZC3H6,ZC3H8	271,-19342
chr2:163036409-163037504	chr2	+	163036709	163037494	True	NM_012198,NM_002054	chr2,chr2	+,-	GCA,GCG	163088,-27795
chr17:30721783-30723513	chr17	+	30722120	30723560	True	NM_003457,NM_022344	chr17,chr17	+,-	ZNF207,C17orf75	-45014,-52931
chr7:6629049-6629387	chr7	+	6629053	6629185	True	NM_024067,NM_001145118	chr7,chr7	+,-	C7orf26,GRID2IP	729,-37986
chr10:29595401-29596076	chr10	+	29595663	29596131	True	NR_030335,NM_032517	chr10,chr10	-,+	MIR604,LYZL1	237953,-17734
chr17:37787244-37787790	chr17	+	37787508	37787746	True	NM_006160,NM_006804,NM_001165937,NM_181505,NM_001165938,NM_032192	chr17,chr17,chr17,chr17,chr17,chr17	-,+,+,+,+,+	NEUROD2,STARD3,STARD3,PPP1R1B,STARD3,PPP1R1B	-23333,5586,5586,-2812,5586,-4386
chr5:140734934-140735244	chr5	+	140735047	140735287	True	NM_032095,NM_018923,NM_018922,NM_032096,NM_032054,NM_018918,NM_032053,NM_005642,NM_018917	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,+,-,+	PCDHGB1,PCDHGB2,PCDHGB1,PCDHGB2,PCDHGA5,PCDHGA5,PCDHGA4,TAF7,PCDHGA4	-5270,4415,-5270,4415,8610,8610,-330,-34696,-330
chr20:44098605-44099010	chr20	+	44098652	44098802	True	NM_006103,NM_006652	chr20,chr20	+,-	WFDC2,SPINT3	-309,45512
chr2:136502804-136503654	chr2	+	136502825	136503448	True	NM_002299,NM_014607	chr2,chr2	-,+	LCT,UBXN4	91361,-3687
chr22:39473356-39473655	chr22	+	39473356	39473698	True	NM_021822,NM_175709	chr22,chr22	+,-	APOBEC3G,CBX7	-397,74890
chr22:39473356-39473655	chr22	+	39436959	39437320	False	NM_145298,NM_001006666,NM_175709	chr22,chr22,chr22	+,+,-	APOBEC3F,APOBEC3F,CBX7	-648,-648,111579
chr3:19187185-19188431	chr3	+	19187269	19188127	True	NM_001131010,NM_144633	chr3,chr3	-,+	SATB1,KCNH8	-707004,1889
chr3:44915306-44915983	chr3	+	44915579	44916000	True	NM_003241,NM_001135179	chr3,chr3	+,-	TGM4,ZDHHC3	97,101731
chr2:237416379-237417199	chr2	+	237416516	237417010	True	NM_020311,NM_024726	chr2,chr2	+,-	CXCR7,IQCA1	61369,-424
chr15:75744033-75744510	chr15	+	75744075	75744423	True	NM_001145357,NM_015477,NM_024608,NM_001145358	chr15,chr15,chr15,chr15	-,-,+,-	SIN3A,SIN3A,NEIL1,SIN3A	3751,-149,-104795,4
chr4:37584396-37585658	chr4	+	37584475	37585628	True	NM_018302,NM_001085399	chr4,chr4	+,-	C4orf19,RELL1	226,102432
chr2:133105310-133105697	chr2	+	133105376	133105744	True	NM_001508,NR_027020	chr2,chr2	+,-	GPR39,ANKRD30BL	68402,-89834
chr11:125433280-125434759	chr11	+	125433468	125434776	True	NM_001007277,NM_022549,NM_004879	chr11,chr11,chr11	+,-,+	EI24,FEZ1,EI24	4521,-67262,4521
chr20:31280317-31280709	chr20	+	31280378	31280676	True	NM_006892,NM_182584	chr20,chr20	+,-	DNMT3B,C20orf203	69514,-40595
chr6:14941258-14941677	chr6	+	14941401	14941651	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	304875,721688
chr13:51748847-51749266	chr13	+	51749121	51749183	True	NR_003923,NM_145019	chr13,chr13	-,+	GUCY1B2,FAM124A	-108828,47323
chr18:32821123-32821348	chr18	+	32821213	32821387	True	NM_001135178,NM_001112734,NM_032347	chr18,chr18,chr18	+,-,+	ZNF397,ZSCAN30,ZNF397	-270,48859,-270
chr3:180634354-180635456	chr3	+	180634536	180635445	True	NM_005087,NM_001190233,NM_001013438,NM_001013439	chr3,chr3,chr3,chr3	+,-,+,+	FXR1,DNAJC19,FXR1,FXR1	-4354,71920,-4354,-4354
chr7:20825208-20825463	chr7	+	20825217	20825429	True	NM_182700,NR_026673,NM_198956	chr7,chr7,chr7	-,+,-	SP8,RPL23P8,SP8	1129,41487,1129
chr6:35891816-35892941	chr6	+	35892255	35892859	True	NR_034069,NM_139013,NM_003137	chr6,chr6,chr6	-,+,-	SRPK1,MAPK14,SRPK1	-3298,102594,-3298
chr14:24403506-24405490	chr14	+	24403754	24405367	True	NR_024081,NM_021004	chr14,chr14	-,+	C14orf165,DHRS4	23,17597
chr4:157853884-157855579	chr4	+	157854131	157855595	True	NM_000824,NM_016205	chr4,chr4	+,-	GLRB,PDGFC	141681,37001
chr11:62521889-62522222	chr11	+	62521893	62522017	True	NM_002696,NM_024784	chr11,chr11	+,-	POLR2G,ZBTB3	6993,-237
chr22:19269150-19269573	chr22	+	19269155	19269569	True	NM_001835,NM_007098,NM_003776	chr22,chr22,chr22	-,-,+	CLTCL1,CLTCL1,MRPL40	9720,9720,150466
chr3:170590613-170591192	chr3	+	170590689	170590873	True	NM_001099645,NM_001185056	chr3,chr3	-,+	RPL22L1,CLDN11	-2644,-451722
chr4:82119516-82120196	chr4	+	82119533	82120121	True	NM_006259,NM_001201	chr4,chr4	-,+	PRKG2,BMP3	6148,-167466
chr15:37110772-37112147	chr15	+	37110771	37112196	True	NR_027320,NM_032499	chr15,chr15	-,+	CSNK1A1P1,C15orf41	-64,-178016
chr1:92764670-92764967	chr1	+	92764680	92764872	True	NM_053274,NM_024813	chr1,chr1	-,+	GLMN,RPAP2	-114,-209
chr7:25020407-25021175	chr7	+	25020458	25021220	True	NM_145321,NM_145322,NM_145320,NM_015550,NM_016447	chr7,chr7,chr7,chr7,chr7	-,-,-,-,+	OSBPL3,OSBPL3,OSBPL3,OSBPL3,MPP6	-698,-698,-698,-698,-407424
chr13:34387454-34387808	chr13	+	34387511	34387680	True	NM_181558,NM_178006,NM_002915	chr13,chr13,chr13	+,-,+	RFC3,STARD13,RFC3	4525,-527610,4525
chr11:66744040-66744597	chr11	+	66744072	66744516	True	NM_001136485,NM_001040716	chr11,chr11	+,-	C11orf86,PC	-1369,-18225
chr7:150930633-150931306	chr7	+	150930650	150931304	True	NM_007189,NM_005692,NR_030407,NM_019015	chr7,chr7,chr7,chr7	-,-,+,+	ABCF2,ABCF2,MIR671,CHPF2	-6333,-6333,4202,-1116
chr7:10983499-10984492	chr7	+	10983728	10984532	True	NM_002489,NM_014660	chr7,chr7	-,+	NDUFA4,PHF14	-3915,28966
chr12:56112062-56112434	chr12	+	56112097	56112371	True	NM_001144997,NR_037656,NR_037658,NR_037655,NR_037657,NM_001487,NM_002905,NM_001199771	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,+,+,+,+,+	ITGA7,BLOC1S1,BLOC1S1-RDH5,BLOC1S1,BLOC1S1,BLOC1S1,RDH5,RDH5	-6008,-2075,-2333,-2333,-2075,-2333,1779,1779
chr17:26699535-26699872	chr17	+	26699541	26699913	True	NM_001080837,NM_000638,NM_015077	chr17,chr17,chr17	-,-,+	SEBOX,VTN,SARM1	-7276,-2168,-605
chr1:28448275-28449718	chr1	+	28448699	28449291	True	NR_027268,NM_016311	chr1,chr1	-,+	LOC653566,ATPIF1	-25630,113310
chr19:40947567-40948587	chr19	+	40948034	40948602	True	NM_013368,NM_020971,NM_203344	chr19,chr19,chr19	-,+,-	SERTAD3,SPTBN4,SERTAD3	-47,24523,1730
chr2:114035749-114035973	chr2	+	114035834	114035972	True	NR_015377,NM_003466,NM_013952,NM_013953,NM_013992	chr2,chr2,chr2,chr2,chr2	+,-,-,-,-	LOC654433,PAX8,PAX8,PAX8,PAX8	-42039,576,576,576,576
chr1:22779568-22780533	chr1	+	22779629	22780393	True	NM_014870,NM_030761,NM_001083621	chr1,chr1,chr1	+,-,+	ZBTB40,WNT4,ZBTB40	-1344,-310110,-1344
chr2:110765518-110766184	chr2	+	110765679	110766165	True	NR_037627,NR_036225	chr2,chr2	+,-	LOC100288570,MIR4267	-60463,61504
chr2:110765518-110766184	chr2	-	111120379	111120865	False	NR_037626,NR_027244	chr2,chr2	+,-	LOC100507334,LOC151009	-117215,21298
chr19:17377238-17378260	chr19	+	17377555	17378309	True	NM_001033549,NM_031941,NM_014173	chr19,chr19,chr19	+,-,+	BABAM1,USHBP1,BABAM1	-78,-2011,-78
chrX:148677037-148677328	chrX	+	148677093	148677359	True	NM_016153,NM_005365,NM_001164415,NM_001171909,NM_001080790	chrX,chrX,chrX,chrX,chrX	-,-,-,+,-	HSFX1,MAGEA9,HSFX2,CXorf40A,MAGEA9B	-119,-7984,-119,-51078,-7977
chrX:148677037-148677328	chrX	-	148855340	148855606	False	NM_016153,NM_032508,NM_005365,NM_001164415,NM_001080790	chrX,chrX,chrX,chrX,chrX	+,-,+,+,+	HSFX1,TMEM185A,MAGEA9,HSFX2,MAGEA9B	119,-141853,7993,119,7986
chr13:102046013-102047545	chr13	+	102046174	102047546	True	NM_052867,NM_004791	chr13,chr13	-,+	NALCN,ITGBL1	21324,57419
chr20:58629824-58630999	chr20	+	58629906	58630972	True	NM_173644,NM_006242	chr20,chr20	+,-	C20orf197,PPP1R3D	7,-114554
chr9:115148199-115150107	chr9	+	115148970	115150067	True	NM_032303,NR_036085,NM_001195822,NR_036651	chr9,chr9,chr9,chr9	+,-,+,+	HSDL2,MIR3134,HSDL2,HSDL2	-6832,-36425,-6832,-6832
chr2:9136680-9138389	chr2	+	9136823	9138405	True	NM_001135191,NM_138799	chr2,chr2	+,-	ASAP2,MBOAT2	208488,5521
chr9:66836995-66837698	chr9	+	66837007	66837239	True	NR_024443,NR_024496	chr9,chr9	-,+	LOC100133920,LOC442421	193793,-342789
chr9:96827647-96828439	chr9	+	96827726	96828382	True	NM_021570,NM_152422	chr9,chr9	-,+	BARX1,PTPDC1	-110118,18363
chr11:111131264-111131574	chr11	+	111131274	111131622	True	NM_198498,NR_034154	chr11,chr11	+,-	C11orf53,C11orf92	-4619,38967
chr19:45735343-45735658	chr19	+	45735374	45735649	True	NM_001199867,NM_138568	chr19,chr19	+,-	MARK4,EXOC3L2	18866,1871
chr12:49935328-49935593	chr12	+	49935354	49935522	True	NM_012284,NM_001012300	chr12,chr12	+,-	KCNH3,MCRS1	-2465,24750
chr7:44617319-44618387	chr7	+	44617646	44618208	True	NM_182547,NM_001003941,NM_019082	chr7,chr7,chr7	-,+,-	TMED4,OGDH,DDX56	3669,27912,-3509
chr8:37376343-37376883	chr8	+	37376350	37376646	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	176654,228968
chr1:110230044-110230284	chr1	+	110230061	110230331	True	NM_000561,NM_000849,NM_146421	chr1,chr1,chr1	+,-,+	GSTM1,GSTM3,GSTM1	86,53379,86
chr1:110230044-110230284	chr1	+	110254563	110254641	False	NM_000851,NM_000849	chr1,chr1	+,-	GSTM5,GSTM3	222,29069
chr7:5096850-5097608	chr7	+	5096973	5097651	True	NM_021163,NR_034163	chr7,chr7	+,-	RBAK,ZNF890P	-11471,86582
chr22:37679184-37679385	chr22	+	37679318	37679394	True	NM_013385,NM_002872	chr22,chr22	+,-	CYTH4,RAC2	-874,-39013
chr7:30056303-30056745	chr7	+	30056348	30056768	True	NM_017946,NM_001197026	chr7,chr7	-,+	FKBP14,PLEKHA8	9559,11208
chr17:80319617-80320001	chr17	+	80319747	80319979	True	NM_003004,NM_207459	chr17,chr17	-,+	SECTM1,TEX19	-27826,-2675
chr12:57400452-57400908	chr12	+	57400505	57400927	True	NM_013251,NM_007264,NM_014830,NM_001178054,NR_033654	chr12,chr12,chr12,chr12,chr12	-,+,-,-,-	TAC3,GPR182,ZBTB39,TAC3,TAC3	9467,-12201,-208,9467,9467
chr12:54349332-54349550	chr12	+	54349333	54349545	True	NM_173860,NR_003716	chr12,chr12	+,-	HOXC12,HOTAIR	-670,13020
chr6:43277733-43279352	chr6	+	43278033	43279013	True	NM_153320,NM_206922	chr6,chr6	+,-	SLC22A7,CRIP3	-12086,-1503
chr2:239756994-239757356	chr2	+	239757085	239757327	True	NR_034162,NM_057179	chr2,chr2	-,+	FLJ43879,TWIST2	90688,-463
chr10:25450632-25452211	chr10	+	25451144	25451556	True	NM_020752,NR_027333	chr10,chr10	+,-	GPR158,LOC100128811	12733,13711
chrX:347654-348017	chrY	+	297668	298002	False	NR_027232,NM_013239	chrY,chrY	+,-	NCRNA00107,PPP2R3B	-66334,8
chrX:347654-348017	chrX	+	347668	348002	True	NR_027232,NM_013239	chrX,chrX	+,-	NCRNA00107,PPP2R3B	-66334,8
chr10:131931770-131932411	chr10	+	131932042	131932189	True	NM_006541,NM_001199868,NR_034125	chr10,chr10,chr10	+,+,-	GLRX3,GLRX3,LOC387723	2449,2449,-22961
chr21:43301659-43302846	chr21	+	43301689	43302502	True	NM_022115,NR_027273,NM_001040424	chr21,chr21,chr21	-,+,-	PRDM15,C21orf121,PRDM15	-2098,139610,-2107
chr6:17281197-17281481	chr6	+	17281228	17281530	True	NM_001143941,NM_001143942,NM_005124,NM_153020	chr6,chr6,chr6,chr6	+,+,-,+	RBM24,RBM24,NUP153,RBM24	764,278,425338,1401
chr11:118661507-118661779	chr11	+	118661588	118661678	True	NM_001716,NM_004397	chr11,chr11	+,-	CXCR5,DDX6	92862,344
chr15:64672758-64673009	chr15	+	64672918	64672982	True	NM_014736,NM_001029989,NM_016213	chr15,chr15,chr15	-,-,+	KIAA0101,KIAA0101,TRIP4	770,770,7020
chr9:130714633-130715083	chr9	+	130714764	130714938	True	NM_203305,NM_001006641	chr9,chr9	-,+	FAM102A,SLC25A25	-1771,115540
chr6:132271499-132271875	chr6	+	132271617	132271863	True	NM_006208,NM_001901	chr6,chr6	+,-	ENPP1,CTGF	-142512,705
chr1:109843729-109844082	chr1	+	109843740	109844018	True	NM_001408,NM_001010985	chr1,chr1	+,-	CELSR2,MYBPHL	-51150,5695
chr3:49229103-49230727	chr3	+	49229150	49230446	True	NM_001080528,NM_178173,NM_001135197	chr3,chr3,chr3	-,+,+	LOC646498,CCDC36,CCDC36	1,5414,6486
chr1:8484370-8484692	chr1	+	8484400	8484684	True	NM_001042682,NM_001080397	chr1,chr1	-,+	RERE,SLC45A1	-653,-100061
chrX:153531847-153532526	chrX	+	153532068	153532518	True	NM_001205201,NM_001145934,NM_001145933,NM_012253,NM_001586	chrX,chrX,chrX,chrX,chrX	-,+,+,+,-	TEX28,TKTL1,TKTL1,TKTL1,TEX28	-8504,890,-8092,-8092,-8614
chrX:16884571-16885749	chrX	+	16884756	16885764	True	NM_001198719,NM_002893,NM_001080975	chrX,chrX,chrX	-,-,+	RBBP7,RBBP7,REPS2	2273,2829,79049
chr4:1282529-1283389	chr4	+	1282553	1283222	True	NM_001328,NM_001017405,NM_005882	chr4,chr4,chr4	-,+,+	CTBP1,MAEA,MAEA	-39645,449,449
chr8:66939115-66939463	chr8	+	66939117	66939395	True	NM_000756,NM_033105	chr8,chr8	-,+	CRH,DNAJC5B	151501,-5377
chr1:11910372-11910777	chr1	+	11910496	11910792	True	NM_002521,NR_037806,NM_006172	chr1,chr1,chr1	-,+,-	NPPB,NPPA-AS1,NPPA	8250,-10171,-2656
chr11:129064567-129065168	chr11	+	129064660	129065221	True	NM_001142685,NM_003658	chr11,chr11	-,+	ARHGAP32,BARX2	-2567,180659
chr8:58913605-58914262	chr8	+	58913719	58914280	True	NM_000780,NM_147189	chr8,chr8	-,+	CYP7A1,FAM110B	498491,-6668
chr16:3100190-3100496	chr16	+	3100189	3100435	True	NM_001103175,NM_022468	chr16,chr16	-,+	CCDC64B,MMP25	-14647,-3558
chr2:214230788-214231683	chr2	+	214230939	214231121	True	NM_001079526,NM_024532	chr2,chr2	-,+	IKZF2,SPAG16	-214606,-81880
chr2:197435262-197436287	chr2	+	197435510	197436159	True	NM_020760,NM_001080539	chr2,chr2	-,+	HECW2,CCDC150	21233,68196
chr10:13344817-13345197	chr10	+	13344889	13345044	True	NM_006214,NM_001037537,NM_182751	chr10,chr10,chr10	-,-,+	PHYH,PHYH,MCM10	-2759,-3143,-141386
chr19:822798-823296	chr19	+	822797	822859	True	NM_001700,NM_024888,NR_036154	chr19,chr19,chr19	+,-,+	AZU1,LPPR3,MIR3187	4971,-845,-9264
chr5:134983758-134984639	chr5	+	134983802	134984556	True	NM_145282,NR_027127	chr5,chr5	+,-	SLC25A48,LOC340074	185808,5118
chr17:76626067-76626631	chr17	+	76626160	76626576	True	NM_173628,NM_024419	chr17,chr17	-,+	DNAH17,PGS1	-52684,-251476
chr6:71139759-71141066	chr6	+	71140065	71141008	True	NM_001851,NM_001162529	chr6,chr6	-,+	COL9A1,FAM135A	-127279,-3975
chr14:74486353-74486633	chr14	+	74486362	74486682	True	NM_001249,NM_025057	chr14,chr14	-,+	ENTPD5,C14orf45	-336,-354
chrX:40440838-40441399	chrX	+	40440876	40441291	True	NM_005765,NM_144970	chrX,chrX	+,-	ATP6AP2,CXorf38	-720,65585
chr16:30075509-30075823	chr16	+	30075528	30075822	True	NM_004608,NM_184041,NM_001127617,NM_184043	chr16,chr16,chr16,chr16	-,+,+,+	TBX6,ALDOA,ALDOA,ALDOA	27433,1221,150,1
chr3:32433924-32434159	chr3	+	32433931	32434091	True	NM_181472,NM_017801,NM_138410	chr3,chr3,chr3	+,-,+	CMTM7,CMTM6,CMTM7	-819,110362,-819
chr17:73509996-73510198	chr17	+	73510031	73510171	True	NM_207346,NM_020753,NM_001142643	chr17,chr17,chr17	+,-,-	TSEN54,CASKIN2,CASKIN2	2437,1506,-4073
chr12:104849440-104850138	chr12	+	104849454	104850050	True	NM_006166,NM_001173982,NM_018413	chr12,chr12,chr12	-,+,+	NFYB,CHST11,CHST11	-317414,641,641
chr15:91426540-91427448	chr15	+	91426592	91427272	True	NM_002005,NM_001143783,NM_198527,NM_001143784,NM_001143785	chr15,chr15,chr15,chr15,chr15	+,+,-,+,+	FES,FES,HDDC3,FES,FES	415,1003,48552,1003,392
chr19:49619926-49621221	chr19	+	49619926	49621213	True	NM_022165,NM_003660,NM_018111	chr19,chr19,chr19	+,+,-	LIN7B,PPFIA3,C19orf73	-2367,1449,1234
chr17:8814842-8815913	chr17	+	8814846	8815850	True	NM_004822,NM_014308	chr17,chr17	+,-	NTN1,PIK3R5	109008,34
chr10:72141851-72142148	chr10	+	72141936	72142162	True	NM_018239,NM_207119,NM_018205,NM_004096	chr10,chr10,chr10,chr10	-,-,-,+	LRRC20,LRRC20,LRRC20,EIF4EBP2	270,-522,270,21698
chr6:116464230-116464668	chr6	+	116464263	116464717	True	NM_152729,NM_000493	chr6,chr6	+,-	NT5DC1,COL10A1	-42322,-16967
chr9:134150537-134150801	chr9	+	134150619	134150815	True	NM_032728,NM_033387	chr9,chr9	+,-	PPAPDC3,FAM78A	14265,1141
chr19:543145-543566	chr19	+	543295	543513	True	NM_005317,NM_182577	chr19,chr19	+,-	GZMM,ODF3L2	513,-68312
chr11:116693244-116693857	chr11	+	116693290	116693816	True	NM_000482,NM_000040	chr11,chr11	-,+	APOA4,APOC3	245,6807
chr16:48277825-48278118	chr16	+	48278040	48278136	True	NM_032583,NM_145186,NM_031490	chr16,chr16,chr16	-,-,+	ABCC11,ABCC11,LONP2	-8952,-8952,74
chrX:149013839-149015098	chrX	+	149014174	149014780	True	NM_001166400,NM_001166401,NM_005364,NM_001013845	chrX,chrX,chrX,chrX	+,+,+,-	MAGEA8,MAGEA8,MAGEA8,CXorf40B	-4284,-4284,-4284,91986
chr2:187466846-187467400	chr2	+	187466845	187467328	True	NM_182521,NM_001144999	chr2,chr2	-,+	ZSWIM2,ITGAV	246619,-1973
chr5:99725547-99725895	chr5	+	99725548	99725924	True	NM_198507,NR_027503	chr5,chr5	+,-	FAM174A,LOC100133050	145199,-1590
chr7:102946920-102947471	chr7	+	102947123	102947195	True	NR_027768,NM_004279	chr7,chr7	-,+	DPY19L2P2,PMPCB	-26210,-9301
chr11:118961065-118961617	chr11	+	118961124	118961668	True	NM_002105,NM_001024382,NM_000190	chr11,chr11,chr11	-,+,+	H2AFX,HMBS,HMBS	4566,-2478,-5588
chr5:137909011-137910740	chr5	+	137909040	137910577	True	NM_001964,NM_004134	chr5,chr5	+,-	EGR1,HSPA9	-107910,791
chr12:52397130-52398965	chr12	+	52397140	52398960	True	NM_181711,NM_001013690	chr12,chr12	+,-	GRASP,FIGNL2	1787,-171439
chr17:26572864-26573975	chr17	+	26572886	26573916	True	NR_002181,NR_028334	chr17,chr17	+,-	PPY2,FLJ40504	553,60542
chr22:41486398-41487221	chr22	+	41486620	41487182	True	NM_138481,NR_031694,NM_001429	chr22,chr22,chr22	-,+,+	CHADL,MIR1281,EP300	149804,1334,1431
chr21:35015762-35016037	chr21	+	35015796	35016066	True	NM_003024,NM_145858,NM_001001132	chr21,chr21,chr21	+,-,+	ITSN1,CRYZL1,ITSN1	-1070,-1636,-1070
chr19:44507708-44508738	chr19	+	44507867	44508291	True	NM_006300,NM_003425	chr19,chr19	+,-	ZNF230,ZNF45	-841,-68456
chr10:123688418-123688789	chr10	+	123688418	123688611	True	NM_001001976,NM_206861,NM_007041	chr10,chr10,chr10	-,+,-	ATE1,TACC2,ATE1	-872,60077,-872
chr2:220410150-220411659	chr2	+	220410167	220411432	True	NR_036082,NM_024536,NM_001195731,NM_001005209	chr2,chr2,chr2,chr2	-,-,-,+	MIR3132,CHPF,CHPF,TMEM198	2488,-1680,-2348,-1473
chr1:117598745-117600534	chr1	+	117598921	117600539	True	NM_003594,NM_001145635	chr1,chr1	+,-	TTF2,TRIM45	2409,63923
chr12:117630560-117631379	chr12	+	117630725	117631395	True	NM_153348,NM_033624,NM_015002	chr12,chr12,chr12	+,-,-	FBXW8,FBXO21,FBXO21	-282019,-2425,-2425
chr11:126031057-126031724	chr11	+	126031177	126031521	True	NM_001144827,NM_024556	chr11,chr11	-,+	RPUSD4,FAM118B	50116,50097
chr3:9416116-9416633	chr3	+	9416117	9416540	True	NM_015453,NR_027007	chr3,chr3	+,-	THUMPD3,LOC440944	-11455,22695
chrY:14775187-14775772	chrY	+	14775241	14775798	True	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	-994,-241852
chr7:23530226-23530450	chr7	+	23530305	23530447	True	NM_006547,NR_026676	chr7,chr7	-,+	IGF2BP3,RPS2P32	-20310,-349
chr16:84650487-84650968	chr16	+	84650525	84650989	True	NM_024731,NM_021149	chr16,chr16	+,-	KLHL36,COTL1	31141,730
chr20:34551323-34552261	chr20	+	34551693	34552067	True	NM_080834,NM_033630,NM_016558	chr20,chr20,chr20	+,-,-	C20orf152,SCAND1,SCAND1	4461,-9145,-8412
chr19:2477550-2477892	chr19	+	2477574	2477646	True	NM_032737,NM_015675	chr19,chr19	-,+	LMNB2,GADD45B	-20616,-1502
chr5:175963209-175963573	chr5	+	175963222	175963577	True	NM_001171976,NM_014901	chr5,chr5	+,-	CDHR2,RNF44	5934,894
chr9:138984694-138985052	chr9	+	138984694	138984994	True	NM_015597,NM_144653	chr9,chr9	+,-	GPSM1,NACC2	236937,2187
chr8:133805349-133805575	chr8	+	133805354	133805629	True	NM_016018,NM_144649	chr8,chr8	+,-	PHF20L1,TMEM71	-17801,-32440
chr16:67841169-67841458	chr16	+	67841223	67841322	True	NM_018430,NM_020850	chr16,chr16	+,-	TSNAXIP1,RANBP10	-264,-668
chr15:45544959-45545476	chr15	+	45545030	45545394	True	NM_138356,NM_004212	chr15,chr15	-,+	SHF,SLC28A2	-51657,-655
chr19:45505315-45505701	chr19	+	45505519	45505598	True	NM_145288,NM_006509	chr19,chr19	-,+	ZNF296,RELB	74145,-863
chr10:48848642-48848912	chr10	+	48848646	48848953	True	NR_033172,NM_153034	chr10,chr10	-,+	FRMPD2P1,ZNF488	13792,-493608
chr10:48848642-48848912	chr10	+	49369211	49369513	False	NR_033172,NM_002750	chr10,chr10	-,+	FRMPD2P1,MAPK8	13784,240173
chr10:48848642-48848912	chr10	+	46661745	46662052	False	NR_027632,NM_015605	chr10,chr10	+,-	FAM35B,PTPN20B	235588,-20742
chr17:26701219-26701850	chr17	+	26701609	26701733	True	NM_001080837,NM_000638,NM_015077	chr17,chr17,chr17	-,-,+	SEBOX,VTN,SARM1	-9344,-4236,-2673
chr9:130550087-130550448	chr9	+	130550149	130550397	True	NM_001261,NM_170600,NR_036055	chr9,chr9,chr9	+,-,+	CDK9,SH2D3C,MIR2861	-1897,-9101,-2005
chr4:49294692-49295419	chr4	+	49294749	49295133	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-306535,-385934
chr4:49294692-49295419	chr4	+	49300904	49301044	False	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-312690,-392089
chr7:135432307-135432796	chr7	+	135432391	135432595	True	NM_205855,NM_001130929	chr7,chr7	-,+	FAM180A,PL-5283	1049,-85221
chr8:120885509-120885906	chr8	+	120885508	120885784	True	NM_024094,NM_022783	chr8,chr8	-,+	DSCC1,DEPTOR	-17338,115
chr2:47593924-47594779	chr2	+	47594037	47594796	True	NM_001743,NM_002354	chr2,chr2	-,+	CALM2,EPCAM	-190297,1490
chr9:86241694-86242572	chr9	+	86241748	86242612	True	NM_001190727,NM_013438,NM_001001551	chr9,chr9,chr9	+,-,+	C9orf103,UBQLN1,C9orf103	-3767,80613,-3767
chr3:125691190-125691430	chr3	+	125691215	125691401	True	NM_001012337,NM_001195223	chr3,chr3	+,-	ROPN1B,ALG1L	-3238,-35328
chr3:125691190-125691430	chr3	-	123698906	123699314	False	NR_028136,NM_017578	chr3,chr3	+,-	KALRN,ROPN1	114243,11239
chr20:43978094-43979741	chr20	+	43978470	43979345	True	NM_002999,NM_001197129	chr20,chr20	-,+	SDC4,SYS1	-1406,11231
chr3:21763514-21764338	chr3	+	21763690	21764354	True	NR_002311,NM_024697	chr3,chr3	+,-	VENTXP7,ZNF385D	-316525,28520
chr2:162927478-162927873	chr2	+	162927505	162927875	True	NM_001935,NM_012198	chr2,chr2	-,+	DPP4,GCA	3227,272707
chr13:114311286-114311531	chr13	+	114311310	114311478	True	NM_000705,NM_002929	chr13,chr13	-,+	ATP4B,GRK1	1085,10118
chr2:201751998-201752499	chr2	+	201752224	201752422	True	NM_001142356,NM_032472,NM_001142355,NM_001136039,NM_130906,NM_021824	chr2,chr2,chr2,chr2,chr2,chr2	+,-,+,+,-,+	NIF3L1,PPIL3,NIF3L1,NIF3L1,PPIL3,NIF3L1	4218,1485,1627,1627,1485,1685
chr2:113994651-113994995	chr2	+	113994735	113995020	True	NR_015377,NM_003466	chr2,chr2	+,-	LOC654433,PAX8	-940,41529
chr1:246562890-246563812	chr1	+	246563005	246563608	True	NM_001139459,NM_022743	chr1,chr1	+,-	CNST,SMYD3	166030,17157
chr1:27955085-27956773	chr1	+	27955093	27956442	True	NM_001042747,NM_001042729,NM_005248,NM_001143912	chr1,chr1,chr1,chr1	-,-,-,+	FGR,FGR,FGR,FAM76A	-2342,-1987,5342,96047
chr10:131263508-131264143	chr10	+	131263519	131264139	True	NM_002412,NR_036179	chr10,chr10	+,-	MGMT,MIR4297	1314,377549
chr3:52353018-52353940	chr3	+	52353029	52353891	True	NM_015512,NR_029677	chr3,chr3	+,-	DNAH1,MIR135A1	-2745,-24705
chr7:100255798-100256601	chr7	+	100255813	100256518	True	NM_005273,NM_016188	chr7,chr7	+,-	GNB2,ACTL6B	14844,-1729
chr17:66573180-66574699	chr17	+	66573445	66574584	True	NR_027751,NM_212472	chr17,chr17	-,+	FAM20A,PRKAR1A	-18877,-64954
chr4:40196289-40197734	chr4	+	40196417	40197778	True	NM_004310,NR_027277	chr4,chr4	+,-	RHOH,LOC344967	748,-137598
chr2:63275186-63275569	chr2	+	63275307	63275497	True	NR_027069,NM_014562,NM_001199770,NR_033389	chr2,chr2,chr2,chr2	-,+,+,-	LOC100132215,OTX1,OTX1,LOC100132215	-461,2439,1694,217
chr14:32739533-32741479	chr3	+	44794141	44794191	False	NM_020242,NM_020696	chr3,chr3	+,-	KIF15,KIAA1143	9017,9032
chr14:32739533-32741479	chr14	+	32739577	32741523	True	NR_027263,NM_004274	chr14,chr14	-,+	C14orf128,AKAP6	-193672,56955
chr21:34911245-34911475	chr21	+	34911377	34911521	True	NM_175085,NM_138927,NM_000819,NM_001136005,NM_032195,NM_001136006	chr21,chr21,chr21,chr21,chr21,chr21	-,+,-,-,+,-	GART,SON,GART,GART,SON,GART	2993,3828,2993,3724,3828,3727
chr6:47264826-47265664	chr6	+	47264829	47265688	True	NM_012120,NM_014452	chr6,chr6	+,-	CD2AP,TNFRSF21	179836,12046
chr14:75535291-75535987	chr14	+	75535359	75535866	True	NM_001042430,NM_203488,NM_001107,NM_024643	chr14,chr14,chr14,chr14	+,-,-,+	FAM164C,ACYP1,ACYP1,FAM164C	432,-4623,-4623,432
chr10:30996430-30997850	chr10	+	30997138	30997734	True	NM_183058,NM_005204	chr10,chr10	-,+	LYZL2,MAP3K8	-78491,-274327
chr16:17563298-17563560	chr16	+	17563368	17563546	True	NR_003569,NM_022166	chr16,chr16	+,-	ABCC6P1,XYLT1	1019023,1242
chr14:65007582-65007845	chr14	+	65007760	65007838	True	NM_006977,NM_021979,NM_172365	chr14,chr14,chr14	-,+,+	ZBTB25,HSPA2,C14orf50	-37206,-625,8781
chr2:170682541-170683372	chr2	+	170682653	170683177	True	NM_172070,NM_014168	chr2,chr2	+,-	UBR3,METTL5	840,-1300
chr3:156537856-156539183	chr3	+	156537953	156539151	True	NM_001004316,NR_003284,NM_001193283	chr3,chr3,chr3	+,-,+	LEKR1,PA2G4P4,LEKR1	4944,-8143,4996
chr16:90094683-90096017	chr16	+	90094906	90095984	True	NM_001042610,NM_001214,NR_023348	chr16,chr16,chr16	-,-,+	DBNDD1,C16orf3,GAS8	-8969,375,-5954
chr2:70780130-70780433	chr2	+	70780177	70780382	True	NM_001099691,NM_016297,NM_003236	chr2,chr2,chr2	-,+,-	TGFA,PCYOX1,TGFA	773,-294997,773
chr16:27080237-27080514	chr16	+	27080271	27080504	True	NM_145080,NM_001145545	chr16,chr16	-,+	NSMCE1,C16orf82	199660,-2103
chr22:50311173-50311593	chr22	+	50311361	50311517	True	NM_024324,NM_024105,NM_001135101	chr22,chr22,chr22	+,-,+	CRELD2,ALG12,CRELD2	765,639,765
chr13:20438302-20438535	chr13	+	20438341	20438491	True	NM_001142684,NM_001039649,NM_003453,NM_001039650	chr13,chr13,chr13,chr13	-,-,+,-	ZMYM5,ZMYM5,ZMYM2,ZMYM5	-565,-565,94318,-565
chr8:6792517-6793616	chr8	+	6792702	6793640	True	NM_018361,NM_001926,NM_001925	chr8,chr8,chr8	+,-,-	AGPAT5,DEFA6,DEFA4	-226875,-9104,2196
chr20:3027892-3028445	chr20	+	3028097	3028479	True	NM_001501,NM_178331,NM_000490,NM_178332,NM_030811	chr20,chr20,chr20,chr20,chr20	+,+,-,+,+	GNRH2,GNRH2,AVP,GNRH2,MRPS26	-3880,-3880,36941,-3880,-1473
chr1:35221382-35222616	chr1	+	35221547	35222326	True	NM_001164824,NM_153212,NM_005268	chr1,chr1,chr1	-,+,+	C1orf212,GJB4,GJB5	102370,3015,-877
chr3:149862079-149863315	chr3	+	149862084	149863159	True	NM_053024,NR_036538	chr3,chr3	-,+	PFN2,LOC646903	-173343,-173069
chr11:34368702-34369133	chr11	+	34369112	34369190	True	NM_001752,NM_145804	chr11,chr11	+,-	CAT,ABTB2	91281,10423
chr4:1004287-1004639	chr4	+	1004417	1004687	True	NM_001004358,NM_001004356,NM_021923,NM_213613	chr4,chr4,chr4,chr4	+,+,+,-	FGFRL1,FGFRL1,FGFRL1,SLC26A1	1072,922,1564,-17193
chr14:100844665-100845015	chr14	+	100844816	100844938	True	NM_001161476,NM_173701,NM_024515,NM_004184,NM_213646,NM_213645	chr14,chr14,chr14,chr14,chr14,chr14	+,-,+,-,-,-	WDR25,WARS,WDR25,WARS,WARS,WARS	-2122,-2136,-2044,-2889,-2889,-2136
chr5:57911414-57912898	chr5	+	57911464	57912914	True	NM_006622,NM_138453	chr5,chr5	-,+	PLK2,RAB3C	-155551,-32576
chr19:10612710-10612965	chr19	+	10612715	10612957	True	NM_203500,NM_012289,NM_032885	chr19,chr19,chr19	-,-,+	KEAP1,KEAP1,ATG4D	1147,574,41689
chr15:35262148-35262404	chr15	+	35262258	35262319	True	NR_003144,NM_014691	chr15,chr15	+,-	LOC723972,AQR	267207,-263
chr11:75142077-75142279	chr11	+	75142082	75142268	True	NR_000025,NM_001039548	chr11,chr11	+,-	SNORD15B,KLHL35	-26668,-408
chr14:50158720-50159860	chr14	+	50159038	50159842	True	NM_172193,NM_001197330,NM_001197331,NM_002692	chr14,chr14,chr14,chr14	+,-,-,-	KLHDC1,POLE2,POLE2,POLE2	-20,-3940,-3940,-3940
chrX:70798380-70798632	chrX	+	70798392	70798622	True	NM_052957,NM_001142797	chrX,chrX	+,-	ACRC,CXCR3	-577,39795
chr10:105004722-105005445	chr10	+	105004777	105005338	True	NM_012229,NM_001143909	chr10,chr10	-,+	NT5C2,LOC729020	-51721,305
chr11:74100201-74100585	chr11	+	74100325	74100428	True	NM_173582,NM_006591	chr11,chr11	-,+	PGM2L1,POLD3	9131,203200
chr7:97882135-97882877	chr7	+	97882224	97882736	True	NM_015395,NM_015379	chr7,chr7	-,+	TECPR1,BRI3	-756,28242
chr15:70390287-70391049	chr15	+	70390405	70391011	True	NM_020908,NM_001105192,NM_005078,NR_026764	chr15,chr15,chr15,chr15	-,-,-,+	TLE3,TLE3,TLE3,C15orf50	-149,-149,-149,-262883
chr1:185343881-185344225	chr1	+	185343881	185344274	True	NM_017673,NM_006469	chr1,chr1	+,-	SWT1,IVNS1ABP	-217641,-57420
chr21:35883990-35884476	chr21	+	35883992	35884524	True	NM_000219,NM_058182	chr21,chr21	-,+	KCNE1,FAM165B	-379,-136294
chr1:39547978-39548537	chr1	+	39547984	39548572	True	NM_017821,NM_012090	chr1,chr1	-,+	RHBDL2,MACF1	-140528,-946
chr20:32707223-32708285	chr20	+	32707223	32708060	True	NM_016732,NM_003908	chr20,chr20	+,-	RALY,EIF2S2	-125549,-7138
chr17:40343770-40344424	chr17	+	40344067	40344473	True	NR_024573,NM_033194,NM_032484,NM_001524,NM_001142622,NM_001142623	chr17,chr17,chr17,chr17,chr17,chr17	-,+,-,-,-,-	GHDC,HSPB9,GHDC,HCRT,GHDC,GHDC	1832,-69362,2127,-6597,2127,2127
chr9:19104006-19104299	chr9	+	19104052	19104159	True	NM_006570,NM_017645	chr9,chr9	+,-	RRAGA,HAUS6	-54731,-1150
chr8:101963589-101963801	chr8	+	101963704	101963840	True	NM_145690,NM_001135702,NM_001135701,NM_001135700,NM_003406,NM_001135699,NR_033962	chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,-,-,+	YWHAZ,YWHAZ,YWHAZ,YWHAZ,YWHAZ,YWHAZ,FLJ42969	567,-905,-144,-144,1833,1431,100441
chr20:44510645-44511476	chr20	+	44510961	44511495	True	NM_080749,NM_080608,NM_001167594,NM_080603,NM_000308,NM_001127695	chr20,chr20,chr20,chr20,chr20,chr20	-,-,+,+,+,+	NEURL2,C20orf165,CTSA,ZSWIM1,CTSA,CTSA	8456,4793,8095,-1174,8095,8095
chr12:54867427-54867841	chr12	+	54867592	54867714	True	NM_005337,NM_144594	chr12,chr12	+,-	NCKAP1L,GTSF1	23780,-206
chr4:7193315-7193781	chr4	+	7193452	7193524	True	NM_020777,NR_027441	chr4,chr4	+,-	SORCS2,FLJ36777	849,-88349
chrX:148775004-148776540	chrX	+	148775022	148776248	True	NM_001011544,NM_032508	chrX,chrX	+,-	MAGEA11,TMEM185A	-5170,-61535
chr5:135528412-135528638	chr5	+	135528476	135528562	True	NR_024418,NM_001001419	chr5,chr5	-,+	LOC389332,SMAD5	339,-59991
chr11:118028258-118028534	chr11	+	118028389	118028523	True	NM_001142348,NM_019894,NM_174934	chr11,chr11,chr11	-,+,-	SCN4B,TMPRSS4,SCN4B	-4759,-80713,-4759
chr3:36939795-36940062	chr3	+	36939959	36940071	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	46527,94769
chr19:43679525-43679937	chr19	+	43679532	43679950	True	NR_026881,NM_001130014	chr19,chr19	+,-	PRG1,PSG5	173257,10788
chr5:95298911-95299517	chr5	+	95299007	95299562	True	NR_026936,NM_012081	chr5,chr5	+,-	C5orf27,ELL2	-111122,-1232
chr9:125293407-125294795	chr4	-	12370496	12370681	True	NR_003132,NM_005114	chr4,chr4	+,-	HSP90AB2P,HS3ST1	964355,-939959
chr1:25758083-25758469	chr1	+	25758197	25758498	True	NM_018202,NM_138618	chr1,chr1	+,-	TMEM57,RHCE	-860,-10834
chr6:118877229-118877672	chr6	+	118877260	118877710	True	NM_001042475,NM_002667	chr6,chr6	-,+	C6orf204,PLN	95360,-7882
chr19:16941964-16943915	chr19	+	16942295	16943844	True	NM_024104,NM_015260	chr19,chr19	-,+	C19orf42,SIN3B	-171327,-2128
chr4:40338790-40340133	chr4	+	40339183	40340172	True	NM_019027,NM_017581	chr4,chr4	-,+	RBM47,CHRNA9	177871,-1769
chr16:84075561-84076178	chr16	+	84075785	84076198	True	NM_001080442,NM_019065	chr16,chr16	-,+	SLC38A8,NECAB2	-23,-73602
chr11:50257983-50258271	chr11	+	50258044	50258106	True	NR_024504,NR_003034	chr11,chr11	+,-	LOC646813,LOC441601	110211,-411
chr22:25426223-25426838	chr22	+	25426643	25426795	True	NM_001001663,NM_001145206	chr22,chr22	-,+	TMEM211,KIAA1671	-91329,-2759
chr16:29625782-29626075	chr16	+	29625873	29626065	True	NR_002593,NM_001030288	chr16,chr16	-,+	SLC7A5P1,SPN	-835,48234
chr16:29625782-29626075	chr16	+	87903942	87904011	False	NM_001173539,NM_003486	chr16,chr16	+,-	BANP,SLC7A5	81026,-842
chr16:29625782-29626075	chr16	+	21532605	21532713	False	NM_001077180,NR_002594	chr16,chr16	+,-	METTL9,SLC7A5P2	78142,-840
chr3:140951367-140952913	chr3	+	140951413	140952965	True	NM_001178140,NM_001037172,NM_152282	chr3,chr3,chr3	-,+,+	TFDP2,ACPL2,ACPL2	766317,-782,-782
chr7:45808530-45808826	chr7	+	45808530	45808736	True	NR_024271,NM_000596	chr7,chr7	-,+	SEPT7P2,IGFBP1	5,119222
chr6:26540584-26541365	chr6	+	26540907	26541194	True	NM_006353,NM_024639	chr6,chr6	+,-	HMGN4,ZNF322A	-2386,118832
chr7:45038993-45039250	chr7	+	45038992	45039162	True	NR_003697,NR_030770,NM_031443,NM_001167935,NM_001167934	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	C7orf40,CCM2,CCM2,CCM2,CCM2	-12733,182,624,624,624
chr2:219000402-219001011	chr2	+	219000458	219000780	True	NM_000634,NM_001557	chr2,chr2	-,+	CXCR1,CXCR2	30986,-9773
chr10:45456002-45456549	chr10	+	45456006	45456590	True	NR_033842,NM_032023	chr10,chr10	-,+	LOC220980,RASSF4	-869,-838
chr4:3249169-3249899	chr4	+	3249207	3249909	True	NM_001042690,NM_003703,NM_002337	chr4,chr4,chr4	+,-,-	C4orf44,NOP14,LRPAP1	857,-284089,284365
chr6:159239950-159240150	chr6	+	159239958	159240114	True	NM_001111077,NM_003379,NM_001195032	chr6,chr6,chr6	-,-,+	EZR,EZR,C6orf99	392,-618,69504
chr11:117699944-117700480	chr11	+	117700040	117700508	True	NM_001680,NM_001558,NM_021603	chr11,chr11,chr11	-,+,-	FXYD2,IL10RA,FXYD2	-4581,156597,-1233
chr6:30860864-30861703	chr6_qbl_hap6	+	2153913	2154417	False	NM_013993,NM_001202521,NM_001202522,NM_001202523,NM_013994,NM_001954,NM_205854	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	+,+,+,+,+,+,-	DDR1,DDR1,DDR1,DDR1,DDR1,DDR1,SFTA2	-8650,-4512,-4512,-8220,-4512,-9116,38556
chr6:30860864-30861703	chr6_dbb_hap3	+	2155042	2155546	False	NM_013993,NM_001202521,NM_001202522,NM_001202523,NM_013994,NM_001954,NM_205854	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	+,+,+,+,+,+,-	DDR1,DDR1,DDR1,DDR1,DDR1,DDR1,SFTA2	-8664,-4526,-4526,-8234,-4526,-9130,38566
chr6:30860864-30861703	chr6_mann_hap4	+	2209005	2209509	False	NM_013993,NM_001202521,NM_001202522,NM_001202523,NM_013994,NM_001954,NM_205854	chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4	+,+,+,+,+,+,-	DDR1,DDR1,DDR1,DDR1,DDR1,DDR1,SFTA2	-8644,-4506,-4506,-8214,-4506,-9110,38574
chr6:30860864-30861703	chr6	+	30860924	30861428	True	NM_013993,NM_001202521,NM_001202522,NM_001202523,NM_013994,NM_001954,NM_205854	chr6,chr6,chr6,chr6,chr6,chr6,chr6	+,+,+,+,+,+,-	DDR1,DDR1,DDR1,DDR1,DDR1,DDR1,SFTA2	-8648,-4510,-4510,-8218,-4510,-9114,38574
chr6:30860864-30861703	chr6_cox_hap2	+	2373024	2373528	False	NM_013993,NM_001202521,NM_001202522,NM_001202523,NM_013994,NM_001954,NM_205854	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,+,+,+,+,+,-	DDR1,DDR1,DDR1,DDR1,DDR1,DDR1,SFTA2	-8650,-4512,-4512,-8220,-4512,-9116,38397
chr13:40173681-40175084	chr13	+	40174080	40174969	True	NM_020751,NM_005780	chr13,chr13	+,-	COG6,LHFP	54794,2437
chr11:67291895-67292100	chr11	+	67291905	67292003	True	NM_003977,NM_016366	chr11,chr11	+,-	AIP,CABP2	-41451,-1006
chr19:52387294-52388551	chr19	+	52387547	52388569	True	NR_024181,NM_032679,NM_001031721,NM_001135590	chr19,chr19,chr19,chr19	-,-,+,-	ZNF577,ZNF577,ZNF613,ZNF577	2682,2722,42118,2682
chr8:23564710-23565508	chr8	+	23564719	23565302	True	NM_016612,NM_001136271	chr8,chr8	+,-	SLC25A37,NKX2-6	-178407,-797
chr9:1050391-1050629	chr9	+	1050479	1050673	True	NM_181872,NM_001130865,NM_152569,NM_006557	chr9,chr9,chr9,chr9	+,+,-,+	DMRT2,DMRT2,C9orf66,DMRT2	-48,-176,-834586,-184
chr20:19739744-19740228	chr20	+	19739778	19740234	True	NM_016652,NM_018993	chr20,chr20	-,+	CRNKL1,RIN2	296506,129975
chr3:39848857-39850090	chr3	+	39848890	39850092	True	NR_033965,NM_015460	chr3,chr3	-,+	FLJ33065,MYRIP	501147,1210
chr20:45091605-45092958	chr20	+	45091935	45092993	True	NR_026640,NM_030777	chr20,chr20	-,+	MKRN7P,SLC2A10	988,245285
chr19:35532732-35533099	chr19	+	35532913	35533113	True	NM_182983,NR_024561,NM_002151	chr19,chr19,chr19	+,-,+	HPN,LOC100128675,HPN	-1554,64112,-1554
chr2:172950675-172951209	chr2	+	172950852	172951166	True	NM_178120,NM_001038493,NM_004405	chr2,chr2,chr2	+,+,-	DLX1,DLX1,DLX2	-695,-695,16362
chr11:62458583-62459242	chr11	+	62458590	62459197	True	NM_203422,NM_012202	chr11,chr11	-,+	LRRN4CL,GNG3	-1219,15916
chr11:9008918-9010842	chr11	+	9009033	9010748	True	NM_182901,NM_020645	chr11,chr11	+,-	C11orf17,NRIP3	-76283,14899
chr20:3686654-3686863	chr20	+	3686660	3686730	True	NM_001197327,NM_023068	chr20,chr20	+,-	HSPA12B,SIGLEC1	26586,1095
chr1:9877919-9878935	chr1	+	9877924	9878786	True	NM_022787,NM_001009566,NM_014944	chr1,chr1,chr1	+,-,-	NMNAT1,CLSTN1,CLSTN1	124699,5822,5822
chr3:184059549-184060387	chr3	+	184059559	184060039	True	NM_144635,NM_001171087,NM_001171093	chr3,chr3,chr3	+,-,+	FAM131A,CLCN2,FAM131A	-4334,19402,-5893
chr9:71791168-71791565	chr9	+	71791191	71791507	True	NM_001170630,NM_201629,NM_002732,NM_004817	chr9,chr9,chr9,chr9	+,+,-,+	TJP2,TJP2,PRKACG,TJP2	-2271,-2271,-162152,-2271
chr12:24070408-24071579	chr12	+	24070543	24071530	True	NR_030625,NM_006940	chr12,chr12	+,-	MIR920,SOX5	293824,31166
chr9:139259743-139260359	chr9	+	139259788	139260214	True	NM_052813,NM_001200003,NM_001080849,NM_052814	chr9,chr9,chr9,chr9	-,+,-,-	CARD9,GPSM1,DNLZ,CARD9	7969,-10587,-1547,7969
chr15:52588164-52588926	chr15	+	52588196	52588908	True	NM_018728,NM_002748	chr15,chr15	-,+	MYO5C,MAPK6	-201,-276841
chr20:44074471-44075378	chr20	+	44074475	44075421	True	NM_006103,NM_014477	chr20,chr20	+,-	WFDC2,TP53TG5	22972,-67518
chr3:62912018-62912827	chr3	+	62912035	62912844	True	NM_183394,NR_027104	chr3,chr3	-,+	CADPS,LOC285401	-50971,175519
chr12:72082302-72084145	chr12	+	72082360	72083893	True	NM_018279,NM_144982	chr12,chr12	+,-	TMEM19,ZFC3H1	-2533,-24611
chr1:115397046-115397372	chr1	+	115397083	115397419	True	NM_003176,NM_025073	chr1,chr1	+,-	SYCP1,SIKE1	35,-73775
chr7:74348930-74349603	chr7	+	74349083	74349323	True	NM_001025202,NM_001145063	chr7,chr7	-,+	STAG3L2,GATSL1	-42352,29759
chr7:74348930-74349603	chr7	-	99882872	99882922	False	NM_001004351,NR_028038	chr7,chr7	+,-	SPDYE3,GATS	22402,-13017
chr7:74348930-74349603	chr7	+	72539625	72539865	False	NR_003664,NR_003580	chr7,chr7	-,+	SPDYE8P,LOC100093631	-39316,29146
chr7:74348930-74349603	chr7	-	74682762	74683002	False	NM_001003795,NR_003580	chr7,chr7	+,-	GTF2IRD2B,LOC100093631	-174466,-29303
chr7:74348930-74349603	chr7	-	74897015	74897255	False	NM_001145064,NR_003664	chr7,chr7	-,+	GATSL2,SPDYE8P	-29674,39277
chr17:26646667-26647092	chr17	+	26646670	26647039	True	NM_014573,NR_028334	chr17,chr17	+,-	TMEM97,FLJ40504	-600,-12262
chr12:70147448-70149245	chr12	+	70147709	70149266	True	NM_175625,NM_032735	chr12,chr12	+,-	RAB3IP,BEST3	-14593,-54513
chr7:43153584-43153901	chr7	+	43153636	43153892	True	NM_015052,NM_002787	chr7,chr7	+,-	HECW1,PSMA2	-1496,-181831
chr17:75183753-75184402	chr17	+	75183753	75184335	True	NM_001144001,NR_036200	chr17,chr17	+,-	SEC14L1,MIR4316	-2510,208851
chr11:62370812-62371594	chr11	+	62370903	62371508	True	NM_004739,NM_153265,NM_000327	chr11,chr11,chr11	-,-,+	MTA2,EML3,ROM1	-1600,8780,8704
chr7:11871540-11871832	chr7	+	11871603	11871753	True	NM_015204,NM_001134232	chr7,chr7	-,+	THSD7A,TMEM106B	121,379094
chr3:63297082-63297778	chr3	+	63297088	63297725	True	NM_001130003,NM_183394	chr3,chr3	+,-	SYNPR,CADPS	-33225,-436024
chr11:93474169-93474395	chr11	+	93474216	93474408	True	NR_003026,NR_002920,NM_024116,NR_031639,NR_002973,NR_003036,NM_014039,NR_002959,NR_003032,NR_003033	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,-,-,+,-,-,-	SNORA1,SNORA8,TAF1D,MIR1304,SNORA40,SNORD6,C11orf54,SNORA18,SNORA32,SNORD5	-8917,-8551,345,-7286,-5814,-9477,384,-7453,-9951,-7750
chr1:59756220-59757744	chr1	+	59756253	59757781	True	NR_027120,NM_018291,NM_001113411	chr1,chr1,chr1	-,+,+	LOC729467,FGGY,FGGY	-143774,4843,4843
chr11:44092985-44093798	chr11	+	44093126	44093652	True	NM_032592,NM_021926,NM_001127219	chr11,chr11,chr11	+,-,+	ACCS,ALX4,ACCS	-5366,238120,-5449
chr1:25866512-25867169	chr1	+	25866518	25866936	True	NM_015627,NM_138618	chr1,chr1	+,-	LDLRAP1,RHCE	3139,-119155
chr12:14513436-14514809	chr12	+	14514346	14514467	True	NM_024829,NM_018179	chr12,chr12	-,+	PLBD1,ATF7IP	206381,4143
chr17:8244934-8245651	chr17	+	8244965	8245549	True	NR_024447,NM_153007	chr17,chr17	-,+	LOC100128288,ODF4	18360,-1828
chr21:45234332-45234812	chr21	+	45234333	45234753	True	NR_026961,NM_003683	chr21,chr21	-,+	LOC284837,RRP1	-1885,-24966
chr19:11671047-11672050	chr19	+	11671367	11671878	True	NM_032377,NM_001299	chr19,chr19	-,+	ELOF1,CNN1	-1316,-21839
chr3:45430466-45432096	chr3	+	45430558	45431448	True	NM_015444,NM_015340	chr3,chr3	-,+	TMEM158,LARS2	-162744,-534
chr8:80540557-80541003	chr8	+	80540729	80540993	True	NM_001040708,NM_007029	chr8,chr8	-,+	HEY1,STMN2	139165,-17731
chr12:48396683-48397031	chr12	+	48396788	48397070	True	NM_024056,NM_033150,NM_001844	chr12,chr12,chr12	+,-,-	TMEM106C,COL2A1,COL2A1	-39511,1265,1265
chr12:56320950-56321531	chr12	+	56320967	56321459	True	NM_001345,NM_032345,NM_001143853,NM_201554,NM_201444,NM_201445	chr12,chr12,chr12,chr12,chr12,chr12	+,-,-,+,+,+	DGKA,WIBG,WIBG,DGKA,DGKA,DGKA	3486,288,-58,4352,4352,4352
chr3:124931675-124931887	chr3	+	124931712	124931778	True	NM_024628,NR_033437,NM_001195483	chr3,chr3,chr3	-,+,-	SLC12A8,UMPS,SLC12A8	-103,-482550,-1469
chr4:140583124-140584394	chr4	+	140583273	140584216	True	NM_002413,NM_001204366,NM_001204367,NM_001204368,NM_030648	chr4,chr4,chr4,chr4,chr4	+,+,+,+,-	MGST2,MGST2,MGST2,MGST2,SETD7	2705,2705,2705,2705,-105696
chr7:23637544-23639371	chr7	+	23637674	23639075	True	NM_138771,NR_002711	chr7,chr7	+,-	CCDC126,CLK2P	-729,-11528
chr2:69749528-69749790	chr2	+	69749573	69749659	True	NR_003705,NM_001153	chr2,chr2	-,+	SNORA36C,ANXA4	-2270,219467
chr20:50810516-50811710	chr20	+	50810816	50811740	True	NM_173485,NM_018197,NM_199426,NM_022088,NM_199427	chr20,chr20,chr20,chr20,chr20	+,-,-,-,-	TSHZ2,ZFP64,ZFP64,ZFP64,ZFP64	777205,-2292,-2292,-2292,-2292
chr13:25563270-25564324	chr13	+	25563458	25563892	True	NR_026730,NM_030979	chr13,chr13	-,+	TPTE2P1,PABPC3	-20851,106383
chr12:50417866-50418798	chr12	+	50418492	50418720	True	NM_001126103,NM_001126104,NM_001095,NM_013277	chr12,chr12,chr12,chr12	-,-,+,-	RACGAP1,RACGAP1,ACCN2,RACGAP1	638,638,32766,638
chr10:124768680-124769112	chr10	+	124768799	124769127	True	NM_001609,NM_022466	chr10,chr10	+,-	ACADSB,IKZF5	-421,-488
chr6:30894171-30894395	chr6_dbb_hap3	+	2188509	2188569	False	NM_205854,NM_001167734	chr6_dbb_hap3,chr6_dbb_hap3	-,+	SFTA2,VARS2	5543,-12340
chr6:30894171-30894395	chr6	+	30894384	30894444	True	NM_205854,NM_001167734	chr6,chr6	-,+	SFTA2,VARS2	5558,-12327
chr6:30894171-30894395	chr6_mann_hap4	+	2242465	2242525	False	NM_205854,NM_001167734	chr6_mann_hap4,chr6_mann_hap4	-,+	SFTA2,VARS2	5558,-12329
chr6:30894171-30894395	chr6_cox_hap2	+	2406311	2406371	False	NM_205854,NM_001167734	chr6_cox_hap2,chr6_cox_hap2	-,+	SFTA2,VARS2	5554,-12179
chr5:125937057-125937449	chr5	+	125937062	125937364	True	NM_001201377,NM_032177,NM_001202404,NM_001182	chr5,chr5,chr5,chr5	-,+,-,-	ALDH7A1,PHAX,ALDH7A1,ALDH7A1	-5980,-506,-5980,-5980
chr12:105626723-105627444	chr12	+	105626835	105627489	True	NM_018171,NM_001145199	chr12,chr12	-,+	APPL2,C12orf75	2569,96924
chr17:72578845-72579220	chr17	+	72579003	72579266	True	NM_152460,NM_001115152	chr17,chr17	+,-	C17orf77,CD300LD	1790,9155
chr3:57262209-57262474	chr3	+	57262234	57262446	True	NM_012096,NM_003865	chr3,chr3	+,-	APPL1,HESX1	-520,-27954
chr20:34205368-34205568	chr20	+	34205464	34205616	True	NR_024377,NM_003116	chr20,chr20	-,+	FER1L4,SPAG4	-9980,-1706
chrX:103087058-103087265	chrX	+	103087059	103087313	True	NM_199478,NM_016370	chrX,chrX	+,-	PLP1,RAB9B	-55356,-51
chr7:121756715-121757800	chr7	+	121756771	121757665	True	NM_005763,NR_036484	chr7,chr7	-,+	AASS,LOC154860	26736,186046
chr2:39107021-39108882	chr2	+	39107074	39108665	True	NM_001145450,NM_198963	chr2,chr2	+,-	MORN2,DHX57	-4035,-4053
chr5:77943458-77943939	chr5	+	77943485	77943843	True	NM_004866,NM_005779	chr5,chr5	+,-	SCAMP1,LHFPL2	-287198,855
chr1:24880180-24881590	chr1	+	24880343	24881217	True	NM_001199012,NM_001010980	chr1,chr1	-,+	C1orf201,C1orf130	-138756,1349
chr6:44215813-44216251	chr6	+	44216005	44216302	True	NM_007355,NM_178148	chr6,chr6	+,-	HSP90AB1,SLC35B2	-1214,9038
chrX:52779283-52780209	chrX	+	52779723	52780127	True	NM_003147,NM_175698,NM_001164417	chrX,chrX,chrX	+,+,+	SSX2,SSX2,SSX2B	180,180,180
chrX:52779283-52780209	chrX	-	52736429	52736833	False	NM_003147,NM_175698,NM_001164417	chrX,chrX,chrX	-,-,-	SSX2,SSX2,SSX2B	-180,-180,-180
chr1:116938668-116939983	chr1	+	116938822	116939922	True	NM_001160234,NR_024126	chr1,chr1	+,-	ATP1A1,ATP1A1OS	-12881,21309
chr11:57334395-57334812	chr11	+	57334453	57334803	True	NM_004223,NM_001105565,NM_198183	chr11,chr11,chr11	-,+,-	UBE2L6,SMTNL1,UBE2L6	433,-24390,706
chr15:77364116-77364799	chr15	+	77364222	77364678	True	NM_003978,NM_005724,NM_198902,NM_001168412	chr15,chr15,chr15,chr15	+,-,-,-	PSTPIP1,TSPAN3,TSPAN3,TSPAN3	-76808,-652,-652,-652
chr13:21665006-21666951	chr13	+	21665073	21666557	True	NM_014572,NM_005870	chr13,chr13	-,+	LATS2,SAP18	-29351,48095
chr12:100040403-100041671	chr12	+	100040645	100041657	True	NM_152788,NM_153364	chr12,chr12	-,+	ANKS1B,FAM71C	336825,-69
chr16:58223429-58225356	chr16	+	58223457	58224431	True	NM_001142302,NM_001896	chr16,chr16	+,-	CCDC113,CSNK2A2	59408,7408
chrX:46428069-46428921	chrX	+	46428458	46428915	True	NM_001190417,NM_019886	chrX,chrX	-,+	ZNF674,CHST7	-23566,4276
chr16:22556023-22557099	chr16	+	22556772	22557140	True	NR_003676,NR_027460	chr16,chr16	+,-	LOC653786,RRN3P3	-39,-107736
chr16:22556023-22557099	chr16	+	21740645	21740930	False	NM_170664,NM_005849	chr16,chr16	+,-	OTOA,IGSF6	-24416,-76673
chr12:31911102-31911826	chr12	+	31911313	31911836	True	NR_004854,NM_001135863	chr12,chr12	-,+	AMN1,METTL20	-29205,-98755
chr11:65291998-65292272	chr11	+	65292150	65292310	True	NM_001048218,NM_001130144,NM_020680	chr11,chr11,chr11	+,-,+	SCYL1,LTBP3,SCYL1	237,33439,237
chr4:25923381-25924424	chr4	+	25923537	25924391	True	NM_001145432,NM_015187	chr4,chr4	+,-	C4orf52,SEL1L3	-7774,-58927
chr10:70091753-70092042	chr10	+	70091821	70092043	True	NM_001033083,NM_021644,NM_012207,NM_022129	chr10,chr10,chr10,chr10	-,+,+,-	PBLD,HNRNPH3,HNRNPH3,PBLD	691,-104,-104,691
chr2:202644630-202645349	chr2	+	202644662	202645251	True	NM_001135745,NM_139158,NM_020919	chr2,chr2,chr2	-,+,-	ALS2,CDK15,ALS2	695,25946,695
chr6:108147063-108148189	chr6	+	108147551	108147955	True	NM_018013,NM_198081	chr6,chr6	+,-	SOBP,SCML4	-336286,-2030
chr9:77566620-77566963	chr9	+	77566623	77566891	True	NM_012383,NM_017998	chr9,chr9	+,-	OSTF1,C9orf40	136506,961
chr15:40533152-40533464	chr15	+	40533174	40533512	True	NM_020168,NM_001039905	chr15,chr15	+,-	PAK6,C15orf56	-1190,11648
chrX:44402287-44403019	chrX	+	44402449	44402836	True	NM_022076,NM_173794	chrX,chrX	+,-	DUSP21,FUNDC1	300412,-228
chr2:130691314-130691711	chr2	+	130691456	130691710	True	NR_026740,NM_032144	chr2,chr2	-,+	LOC389033,RAB6C	230,45524
chr17:79831518-79832178	chr17	+	79831567	79832031	True	NM_001185077,NM_001002244,NM_004309,NM_001185078	chr17,chr17,chr17,chr17	-,+,-,-	ARHGDIA,ANAPC11,ARHGDIA,ARHGDIA	-2777,17567,-2285,-2285
chr1:247506238-247507597	chr1	+	247506278	247507369	True	NM_032752,NM_001079821	chr1,chr1	-,+	ZNF496,NLRP3	-11233,72088
chr19:11306220-11307537	chr19	+	11306484	11307339	True	NM_015493,NM_018687,NM_001136191	chr19,chr19,chr19	-,+,-	KANK2,LOC55908,KANK2	-1218,42955,954
chr8:74906551-74907015	chr8	+	74906581	74907055	True	NM_005648,NM_015364,NM_001195797	chr8,chr8,chr8	-,+,+	TCEB1,LY96,LY96	-22059,-3068,-3068
chr11:2890742-2890984	chr11	+	2890741	2890977	True	NR_024627,NM_000076	chr11,chr11	+,-	KCNQ1DN,CDKN1C	285,16068
chr2:152828418-152829916	chr2	+	152828472	152829956	True	NM_001005747,NM_052905	chr2,chr2	-,+	CACNB4,FMNL2	586,361794
chr2:241373068-241373365	chr2	+	241373132	241373394	True	NR_024014,NM_002081	chr2,chr2	-,+	PP14571,GPC1	22773,1720
chr19:43969372-43969627	chr19	+	43969387	43969665	True	NM_001130011,NM_014400	chr19,chr19	+,-	TEX101,LYPD3	-50403,216
chr17:7338954-7339238	chr17	+	7339031	7339209	True	NM_152766,NM_000747,NM_178518,NM_004112	chr17,chr17,chr17,chr17	-,+,+,+	C17orf61,CHRNB1,TMEM102,FGF11	-31581,9196,-327,3479
chr15:44115665-44116614	chr15	+	44115894	44116548	True	NM_005926,NM_001167941,NM_024908	chr15,chr15,chr15	-,+,+	MFAP1,WDR76,WDR76	453,2563,2563
chr7:132263950-132264532	chr7	+	132263960	132264428	True	NM_001037126,NM_001105543,NM_020911	chr7,chr7,chr7	+,-,-	EXOC4,PLXNA4,PLXNA4	673394,-2637,-2637
chrX:74144673-74145020	chrX	+	74144686	74145066	True	NM_145052,NM_001008537	chrX,chrX	+,-	UPRT,KIAA2022	348827,271
chr22:29279133-29279549	chr22	+	29279132	29279487	True	NM_005080,NM_032173	chr22,chr22	-,+	XBP1,ZNRF3	-82572,402
chr1:233430823-233431046	chr1	+	233430944	233431012	True	NM_032435,NM_014801	chr1,chr1	+,-	KIAA1804,PCNXL2	32501,497
chr6:155616422-155617705	chr6	+	155616588	155617761	True	NM_001001346,NM_016020	chr6,chr6	+,-	CLDN20,TFB1M	-31492,17914
chr17:36614626-36614888	chr17	+	36614683	36614877	True	NM_001004334,NM_001199417	chr17,chr17	-,+	GPR179,ARHGAP23	-114990,-30014
chr5:55777804-55778009	chr5	+	55777825	55778057	True	NM_024669,NM_005921	chr5,chr5	-,+	ANKRD55,MAP3K1	-248639,332842
chr19:19845188-19845761	chr19	+	19845358	19845809	True	NM_033204,NM_021030	chr19,chr19	+,-	ZNF101,ZNF14	-65751,-1437
chr19:54725862-54726708	chr19	+	54725894	54726696	True	NM_001013,NM_001081450,NM_006864	chr19,chr19,chr19	+,-,-	RPS9,LILRB3,LILRB3	-21219,313,313
chr19:54725862-54726708	chr19	+	54745646	54746448	False	NM_001013,NM_024318	chr19,chr19	+,-	RPS9,LILRA6	-40971,326
chr10:97351896-97352536	chr10	+	97352531	97352585	True	NM_024991,NM_001098175	chr10,chr10	-,+	SORBS1,ENTPD1	-31360,118950
chr7:107301840-107302158	chr7	+	107301975	107302193	True	NM_000441,NR_028137	chr7,chr7	+,-	SLC26A4,LOC286002	-946,100
chr2:198842694-198842920	chr2	+	198842698	198842930	True	NM_006226,NM_197970	chr2,chr2	+,-	PLCL1,BOLL	-173330,-191760
chr19:47811324-47812421	chr19	+	47811732	47812404	True	NM_001736,NM_001127242	chr19,chr19	+,-	C5AR1,BBC3	699,-75709
chr10:70979390-70979775	chr10	+	70979429	70979823	True	NM_001057,NM_025130	chr10,chr10	-,+	TACR2,HKDC1	196901,235
chr10:71077612-71077865	chr10	+	71077620	71077734	True	NM_033496,NM_001057,NM_000188	chr10,chr10,chr10	+,-,+	HK1,TACR2,HK1	-2065,98990,868
chr11:72142648-72144074	chr11	+	72142893	72144035	True	NM_001567,NM_030813	chr11,chr11	+,-	INPPL1,CLPB	-207062,1583
chr7:120965376-120966933	chr7	+	120965572	120966920	True	NM_057168,NM_016087,NM_001040020	chr7,chr7,chr7	+,+,-	WNT16,WNT16,FAM3C	2169,-213,69553
chr3:182512176-182512581	chr3	+	182512177	182512594	True	NM_014616,NM_020640	chr3,chr3	+,-	ATP11B,DCUN1D1	-937,185782
chr2:239333983-239334846	chr2	+	239334036	239334824	True	NR_037809,NM_001040445	chr2,chr2	-,+	LOC151171,ASB1	129366,801
chr1:225966887-225968773	chr1	+	225967215	225968801	True	NM_003133,NM_001130440,NM_014698	chr1,chr1,chr1	+,+,-	SRP9,SRP9,TMEM63A	-1763,-1763,101683
chr5:122111224-122111972	chr5	+	122111409	122112020	True	NM_000943,NM_003100	chr5,chr5	-,+	PPIC,SNX2	260462,-710
chr19:47137496-47137784	chr19	+	47137748	47137822	True	NM_033258,NM_000960,NM_005184	chr19,chr19,chr19	-,-,+	GNG8,PTGIR,CALM3	167,-9394,-33287
chrY:4973205-4973523	chrY	+	4973299	4973374	True	NM_032973,NR_001540	chrY,chrY	+,-	PCDH11Y,TTTY23	-49227,1138332
chrY:4973205-4973523	chrX	+	91138828	91138895	False	NM_001168363,NM_004538	chrX,chrX	+,-	PCDH11X,NAP1L3	-48424,1789842
chr3:48939027-48940421	chr3	+	48939324	48939424	True	NM_006321,NM_000387	chr3,chr3	+,-	ARIH2,SLC25A20	16856,-2898
chr7:101467915-101468373	chr7	+	101468090	101468390	True	NM_181552,NM_138403,NM_001913,NM_001202543,NM_001202546,NM_001202544,NM_001202545,NM_181500	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,-,+,+,+,+,+,+	CUX1,MYL10,CUX1,CUX1,CUX1,CUX1,CUX1,CUX1	-7263,-195514,-8961,-8961,-8857,-8961,-8961,-8961
chr5:14867759-14868783	chr5	+	14867919	14868489	True	NM_138348,NM_054027	chr5,chr5	+,-	FAM105B,ANKH	-203192,3454
chr5:173164708-173165900	chr5	+	173164911	173165932	True	NM_030627,NM_138369	chr5,chr5	+,-	CPEB4,BOD1	149398,-121245
chr12:23712726-23713002	chr12	+	23712748	23712832	True	NR_030625,NM_178010	chr12,chr12	+,-	MIR920,SOX5	652522,24730
chr1:11752813-11753336	chr1	+	11752897	11753349	True	NM_198545,NM_001127325	chr1,chr1	+,-	C1orf187,MAD2L2	-1167,-1219
chr7:139523591-139525521	chr7	+	139523590	139525536	True	NR_029394,NM_001061,NM_022740,NM_030984,NM_001166253	chr7,chr7,chr7,chr7,chr7	+,+,-,+,+	TBXAS1,TBXAS1,HIPK2,TBXAS1,TBXAS1	3415,3415,-45897,3415,3415
chr7:128115674-128116596	chr7	+	128115709	128116538	True	NM_183243,NM_018396	chr7,chr7	-,+	IMPDH1,METTL2B	-65673,244
chr1:72747845-72748077	chr1	+	72747867	72748017	True	NM_153742,NM_173808	chr1,chr1	+,-	CTH,NEGR1	-1871017,310
chr9:131222120-131222550	chr9	+	131222119	131222486	True	NR_029837,NM_153439,NM_153440,NM_153437,NM_153436,NM_153433,NM_153432,NM_153435,NR_036757,NR_036756,NR_036755,NR_036754	chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,+,+,+,+,+,+,+,+,+,+,+	MIR219-2,ODF2,ODF2,ODF2,ODF2,ODF2,ODF2,ODF2,ODF2,ODF2,ODF2,ODF2	-67126,-3890,-3496,-2989,-4741,-3496,-3890,-3890,-3890,-3890,-3890,-3890
chr2:241832988-241833587	chr2	+	241833040	241833540	True	NM_001085437,NM_024861,NM_000030	chr2,chr2,chr2	-,-,+	C2orf54,C2orf54,AGXT	2083,-1588,-24929
chr4:110398215-110399363	chr4	+	110398344	110398934	True	NM_032518,NM_006323	chr4,chr4	-,+	COL25A1,SEC24B	-174545,-43424
chr7:21465508-21466429	chr7	+	21465712	21466468	True	NM_003112,NM_001127370	chr7,chr7	+,-	SP4,CDCA7L	1220,519124
chrX:50657799-50659216	chrX	+	50657829	50659243	True	NM_005448,NR_027121,NR_003933	chrX,chrX,chrX	+,-,+	BMP15,SHROOM4,LOC347376	-4146,-100785,-9449
chr2:203106366-203107215	chr2	+	203106506	203106923	True	NM_003352,NM_001005782,NM_001005781,NM_015934	chr2,chr2,chr2,chr2	-,-,-,+	SUMO1,SUMO1,SUMO1,NOP58	-3184,-3184,-3184,23591
chr19:45279123-45279842	chr19	+	45279452	45279836	True	NM_012116,NR_027754,NM_001130852	chr19,chr19,chr19	+,-,+	CBLC,CEACAM22P,CBLC	1289,-219302,1289
chr9:46117953-46119075	chr12	+	54470887	54470937	True	NR_026655,NR_026658	chr12,chr12	+,-	FLJ12825,LOC100240735	-18900,4720
chr9:46117953-46119075	chr9	+	46118195	46119093	False	NM_001145196,NR_024060	chr9,chr9	-,+	FAM75A6,FAM27A	-2487465,-391217
chr9:46117953-46119075	chr9	-	67784651	67785370	False	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	8869,141390
chr9:46117953-46119075	chr9	-	44872856	44872906	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	117329,-1242126
chr9:46117953-46119075	chr9	+	44999030	44999749	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-8845,-1368300
chr9:46117953-46119075	chr9	+	45734469	45735188	False	NM_001145196,NR_024060	chr9,chr9	-,+	FAM75A6,FAM27A	-2103739,-7491
chr4:52708830-52709083	chr4	+	52708888	52708968	True	NM_001040402,NM_015115,NM_001024611	chr4,chr4,chr4	+,+,-	DCUN1D4,DCUN1D4,LRRC66	307,307,174868
chr7:44058129-44058437	chr7	+	44058176	44058236	True	NM_175064,NR_003655	chr7,chr7	+,-	SPDYE1,POLR2J4	-17738,562
chr10:73079142-73079432	chr10	+	73079334	73079466	True	NM_001174098,NM_018344,NR_033414,NR_033413,NM_001164375	chr10,chr10,chr10,chr10,chr10	+,+,+,+,-	SLC29A3,SLC29A3,SLC29A3,SLC29A3,C10orf105	-375,-375,-375,-375,400162
chr1:32860115-32860655	chr1	+	32860277	32860699	True	NM_052841,NM_001143890,NM_018045,NM_001143889,NM_001143888	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	TSSK3,BSDC1,BSDC1,BSDC1,BSDC1	-32466,-215,-215,-215,-215
chr1:47609381-47609750	chr1	+	47609399	47609703	True	NM_005764,NM_001010969	chr1,chr1	-,+	PDZK1IP1,CYP4A22	46118,-6343
chr22:28200215-28200783	chr22	+	28200354	28200588	True	NM_002430,NR_026962	chr22,chr22	-,+	MN1,TTC28-AS1	-2868,114775
chr7:143057657-143058007	chr7	+	143057668	143057941	True	NM_001010972,NM_001031690,NM_014690	chr7,chr7,chr7	+,-,-	ZYX,FAM131B,FAM131B	20418,1956,1289
chrX:70365391-70365851	chrX	+	70365409	70365731	True	NM_001166660,NM_181303,NM_018977,NM_000206	chrX,chrX,chrX,chrX	+,+,+,-	NLGN3,NLGN3,NLGN3,IL2RG	-779,-779,-779,-33928
chr8:18870187-18870744	chr8	+	18870207	18870780	True	NM_001174160,NM_015310	chr8,chr8	+,-	SH2D4A,PSD3	300300,466
chr1:248902208-248903242	chr1	+	248902356	248903150	True	NM_001085474,NR_036070,NM_001013355	chr1,chr1,chr1	-,+,+	LOC646627,MIR3124,OR2G6	51,217425,-217459
chr2:67625275-67625558	chr2	+	67625274	67625439	True	NM_019002,NM_001190263	chr2,chr2	+,-	ETAA1,C1D	-887,664779
chr11:117799704-117800158	chr11	+	117799812	117800084	True	NM_001558,NM_001077263	chr11,chr11	+,-	IL10RA,TMPRSS13	57021,81
chr7:56391198-56391766	chr7	+	56391722	56391780	True	NR_029420,NR_026929	chr7,chr7	-,+	LOC650226,DKFZp434L192	124342,172135
chr7:56391198-56391766	chr7	-	45897285	45897339	False	NM_000596,NM_000598	chr7,chr7	+,-	IGFBP1,IGFBP3	30619,63586
chr1:228396591-228396954	chr1	+	228396654	228396926	True	NM_181465,NM_001098623,NM_052843	chr1,chr1,chr1	-,+,+	MRPL55,OBSCN,OBSCN	-99641,-844,-844
chr19:49174375-49175267	chr19	+	49174440	49175315	True	NM_000511,NM_145807	chr19,chr19	+,-	FUT2,NTN5	23912,999
chr15:80185215-80185550	chr15	+	80185369	80185445	True	NM_006441,NM_001199758,NR_028330,NR_037654	chr15,chr15,chr15,chr15	-,-,+,-	MTHFS,MTHFS,C15orf37,MTHFS	4004,4240,29667,3952
chr15:73075001-73075585	chr15	+	73075058	73075550	True	NM_031284,NR_023319,NR_023318,NM_033028	chr15,chr15,chr15,chr15	-,-,-,+	ADPGK,ADPGK,ADPGK,BBS4	626,626,626,-96590
chr3:88190743-88192390	chr3	+	88190791	88192308	True	NM_173824,NM_001195308,NM_018293	chr3,chr3,chr3	+,-,+	C3orf38,CGGBP1,ZNF654	6584,6758,-2580
chr1:160680847-160681613	chr1	+	160680871	160681489	True	NM_001778,NM_021181	chr1,chr1	-,+	CD48,SLAMF7	146,27587
chr1:109844916-109845480	chr1	+	109844927	109845415	True	NM_001408,NM_001010985	chr1,chr1	+,-	CELSR2,MYBPHL	-52337,4298
chr7:75682002-75683222	chr7	+	75682364	75683156	True	NM_005918,NM_016086	chr7,chr7	+,-	MDH2,STYXL1	-5029,-5043
chr8:61436009-61436340	chr8	+	61436009	61436209	True	NM_002865,NM_004056	chr8,chr8	+,-	RAB2A,CA8	-6501,-242055
chr6:24869839-24870092	chr6	+	24869881	24870141	True	NM_015864,NM_015895	chr6,chr6	-,+	FAM65B,GMNN	7492,-94776
chr15:23131504-23133266	chr3	-	33894135	33894195	True	NM_015097,NR_027867	chr3,chr3	-,+	CLASP2,PDCD6IP	-134287,-24066
chr15:23131504-23133266	chr15	+	23131831	23133239	False	NM_001142275,NR_024074	chr15,chr15	-,+	NIPA1,GOLGA8IP	-44988,122002
chr14:24522683-24522924	chr14	+	24522684	24522858	True	NM_138360,NM_006177	chr14,chr14	+,-	LRRC16B,NRL	-1529,31024
chr17:56769377-56769881	chr17	+	56769530	56769879	True	NM_031272,NM_002876,NM_198393,NM_001201457,NM_058216	chr17,chr17,chr17,chr17,chr17	-,+,-,-,+	TEX14,RAD51C,TEX14,TEX14,RAD51C	-114,83,-114,-114,83
chr15:34659882-34660963	chr15	+	34660019	34660793	True	NM_175741,NM_153613	chr15,chr15	+,-	C15orf55,LPCAT4	-22004,-624
chr3:70173159-70173888	chr3	+	70173162	70173702	True	NM_198178,NM_015123	chr3,chr3	+,-	MITF,FRMD4B	-187462,-737732
chr3:51706157-51707962	chr3	+	51706165	51707825	True	NM_015926,NM_001129884,NR_024012,NM_001143833	chr3,chr3,chr3,chr3	+,+,+,-	TEX264,TEX264,TEX264,IQCF6	-994,-994,-994,105428
chr21:46045692-46046642	chr21	+	46045995	46046639	True	NM_198698,NM_198690	chr21,chr21	-,+	KRTAP12-4,KRTAP10-9	27987,400
chr19:36301083-36301367	chr19	+	36301229	36301365	True	NM_052948,NM_021232	chr19,chr19	+,-	ARHGAP33,PRODH2	-34870,2886
chr2:49346267-49347325	chr2	+	49346419	49347053	True	NM_000145,NM_006872	chr2,chr2	-,+	FSHR,GTF2A1L	34672,-501542
chr16:30391348-30392243	chr16	+	30391360	30392222	True	NM_013292,NM_052838,NM_015527	chr16,chr16,chr16	+,-,-	MYLPF,SEPT1,TBC1D10B	-5290,1999,-9838
chr16:3995062-3996697	chr16	+	3995066	3996748	True	NM_005223,NM_004380	chr16,chr16	+,-	DNASE1,CREBBP	-292177,-64945
chr10:30964669-30964998	chr10	+	30964820	30964908	True	NM_183058,NM_005204	chr10,chr10	-,+	LYZL2,MAP3K8	-46173,-242015
chr10:30964669-30964998	chr10	-	29796893	29796981	False	NR_030335,NR_003930	chr10,chr10	-,+	MIR604,LOC387647	37105,-98443
chr2:98280886-98281244	chr2	+	98281045	98281205	True	NM_001862,NM_005735	chr2,chr2	+,-	COX5B,ACTR1B	-18584,-484
chr17:1548814-1549088	chr17	+	1548814	1548918	True	NM_001163673,NR_028075,NM_031430,NR_028076,NM_145352,NM_145350,NM_003693	chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,-,-,-,-	WDR81,SCARF1,RILP,SCARF1,SCARF1,SCARF1,SCARF1	70898,173,4524,173,173,173,173
chr16:56715428-56715672	chr16	+	56715501	56715721	True	NM_005952,NM_005950,NR_003669	chr16,chr16,chr16	+,-,+	MT1X,MT1G,MT1IP	660,-13524,-5914
chr19:52934397-52936176	chr19	+	52934506	52935813	True	NM_001143939,NM_001143938,NM_001105549	chr19,chr19,chr19	+,+,-	ZNF534,ZNF534,ZNF83	-46,-46,205894
chr7:102075871-102077288	chr7	+	102076424	102077106	True	NM_017621,NM_032831,NM_001126340	chr7,chr7,chr7	-,+,+	ALKBH4,ORAI2,ORAI2	28265,-2480,-2480
chr19:37184044-37184820	chr19	+	37184106	37184754	True	NM_152603,NM_153257	chr19,chr19	+,-	ZNF567,ZNF461	-3855,-26367
chr3:52479628-52480216	chr3	+	52479632	52480214	True	NM_003280,NM_020163,NM_007184	chr3,chr3,chr3	-,-,+	TNNC1,SEMA3G,NISCH	7893,-589,9309
chr1:28288010-28288567	chr1	+	28288035	28288539	True	NM_002946,NM_018053	chr1,chr1	-,+	RPA2,XKR8	-46799,-1582
chr10:26932055-26932348	chr10	+	26932076	26932376	True	NR_026794,NM_001012750	chr10,chr10	+,-	LOC731789,ABI1	-90,217690
chr9:125561329-125562006	chr9	+	125561370	125561928	True	NM_080859,NM_005388	chr9,chr9	+,-	OR1K1,PDCL	473,29059
chr20:61585313-61585704	chr20	+	61585364	61585724	True	NM_022105,NM_022082	chr20,chr20	-,+	DIDO1,SLC17A9	-16060,-1416
chr21:42204989-42205984	chr21	+	42205127	42206001	True	NM_001389,NR_036167	chr21,chr21	-,+	DSCAM,MIR3197	13088,333482
chr16:30005667-30006157	chr16	+	30005768	30006176	True	NM_003609,NM_173618	chr16,chr16	-,+	HIRIP3,INO80E	1286,1354
chr15:69708347-69708940	chr15	+	69708430	69708978	True	NM_138555,NM_004856,NM_006305	chr15,chr15,chr15	+,+,-	KIF23,KIF23,ANP32A	-1801,-1801,-595169
chr14:98559887-98561244	chr14	+	98560001	98561291	True	NR_015430,NM_182560	chr14,chr14	-,+	C14orf64,C14orf177	-115540,616658
chr12:25654014-25655389	chr12	+	25654290	25655422	True	NM_152590,NM_001001660	chr12,chr12	-,+	IFLTD1,LYRM5	50806,-306192
chr16:84402386-84403861	chr16	+	84402801	84403733	True	NM_014861,NM_172347	chr16,chr16	+,-	ATP2C2,KCNG4	-719,-129445
chr17:2303372-2303609	chr17	+	2303450	2303520	True	NM_020310,NM_001098509	chr17,chr17	-,+	MNT,SGSM2	788,-62693
chr11:17249433-17249829	chr11	+	17249454	17249787	True	NM_002645,NM_005013	chr11,chr11	-,+	PIK3C2A,NUCB2	-58100,48498
chr13:111600842-111601252	chr13	+	111600841	111601203	True	NM_017664,NM_001113511	chr13,chr13	-,+	ANKRD10,ARHGEF7	-33425,166420
chr19:41255442-41255945	chr19	+	41255755	41255990	True	NM_198476,NM_004596	chr19,chr19	-,+	C19orf54,SNRPA	-33,768
chr1:155049412-155050607	chr1	+	155049460	155050368	True	NM_144622,NM_004952	chr1,chr1	-,+	DCST2,EFNA3	-43203,979
chr1:162332047-162333224	chr1	+	162332309	162333000	True	NM_001126060,NM_182581	chr1,chr1	+,-	NOS1AP,C1orf111	73,13701
chr19:57926237-57928036	chr19	+	57926640	57927837	True	NM_020633,NM_006959	chr19,chr19	-,+	VN1R1,ZNF17	40321,-4169
chr1:41153247-41153795	chr1	+	41153331	41153648	True	NR_024567,NM_014223,NM_001142589,NM_001142588,NM_001142587,NM_001142590	chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,+,+,+	LOC100130557,NFYC,NFYC,NFYC,NFYC,NFYC	4344,3593,3593,3593,3593,4031
chr12:54980471-54982286	chr12	+	54980818	54982105	True	NM_006741,NM_001165975	chr12,chr12	-,+	PPP1R1A,PDE1B	388,-25770
chr17:65360087-65361158	chr17	+	65360224	65360990	True	NM_002816,NM_012417,NM_174871	chr17,chr17,chr17	-,+,-	PSMD12,PITPNC1,PSMD12	1781,12933,1781
chr4:159076281-159078193	chr4	+	159076682	159078208	True	NM_016613,NM_018342	chr4,chr4	-,+	FAM198B,TMEM144	15568,53192
chr12:58130212-58130929	chr12	+	58130323	58130863	True	NM_001122772,NM_005981,NM_014770	chr12,chr12,chr12	-,+,-	AGAP2,TSPAN31,AGAP2	1216,7920,5127
chr8:145083574-145084579	chr8	+	145083599	145084551	True	NM_032789,NM_001134374,NM_198572	chr8,chr8,chr8	-,+,+	PARP10,SPATC1,SPATC1	-22964,2030,2030
chr2:243032310-243033568	chr2	+	243032447	243033600	True	NM_005018	chr2	-	PDCD1	-231389
chr2:74273760-74273981	chr2	+	74273779	74273905	True	NM_144993,NM_001035505	chr2,chr2	+,-	TET3,BOLA3	-380,101184
chr13:43168306-43170003	chr13	+	43168728	43169806	True	NM_003701,NM_001002264	chr13,chr13	+,-	TNFSF11,EPSTI1	-20495,396621
chr1:144994608-144994815	chr1	+	144994617	144994747	True	NM_014644,NM_001195260,NM_001195261,NM_004892,NM_001002812,NM_001002810,NM_001198834	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,-,-	PDE4DIP,PDE4DIP,PDE4DIP,SEC22B,PDE4DIP,PDE4DIP,PDE4DIP	325,2414,385,101659,325,336,336
chr1:110655918-110656255	chr1	+	110656017	110656235	True	NM_006492,NM_203412	chr1,chr1	-,+	ALX3,UBL4B	-42695,-1006
chr15:86679132-86681065	chr15	+	86679290	86681044	True	NM_022480,NM_152336	chr15,chr15	-,+	KLHL25,AGBL1	-341101,4197
chr7:99102521-99102793	chr7	+	99102584	99102830	True	NM_014569,NM_145102,NM_032164	chr7,chr7,chr7	+,+,-	ZKSCAN5,ZKSCAN5,ZNF394	-62,-362,-4707
chr20:55843645-55844508	chr20	+	55843682	55844523	True	NM_012444,NM_001719	chr20,chr20	+,-	SPO11,BMP7	60307,-1975
chr1:179198678-179198908	chr1	+	179198687	179198851	True	NM_001168238,NM_001168237,NM_001168236,NM_007314,NM_001136001,NM_003101	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,+	ABL2,ABL2,ABL2,ABL2,ABL2,SOAT1	18,18,18,18,18,64165
chr9:98642453-98643496	chr9	+	98642502	98643534	True	NM_001010895,NR_023390,NR_023389	chr9,chr9,chr9	+,-,-	C9orf102,C9orf130,C9orf130	-4662,-4243,-4243
chr9:116041734-116043432	chr9	+	116042172	116043003	True	NM_139286,NM_004697	chr9,chr9	-,+	CDC26,PRPF4	-4303,-4256
chr17:39863660-39864955	chr17	+	39863858	39864806	True	NM_001079870,NM_000805	chr17,chr17	-,+	HAP1,GAST	26142,3806
chr8:39177428-39179268	chr8	+	39177805	39179313	True	NR_001448,NR_001569	chr8,chr8	+,-	ADAM5P,ADAM3A	-5675,201214
chrX:77164242-77164892	chrX	+	77164359	77164919	True	NM_032121,NM_000052,NM_001866	chrX,chrX,chrX	-,+,+	MAGT1,ATP7A,COX7B	-13294,1274,-9457
chr15:79703470-79704034	chr15	+	79703497	79703853	True	NM_015206,NM_002891	chr15,chr15	+,-	KIAA1024,RASGRF1	21004,-320282
chr11:89173650-89174970	chr11	+	89173952	89174986	True	NM_001143836,NM_153696	chr11,chr11	-,+	NOX4,FOLH1B	49717,217478
chrX:70584981-70585613	chrX	+	70585115	70585349	True	NM_001171162,NM_138923,NM_004606	chrX,chrX,chrX	-,+,+	ZMYM3,TAF1,TAF1	-110068,764,764
chr2:231116601-231117544	chr2	+	231116730	231117366	True	NM_001185015,NM_007237	chr2,chr2	-,+	SP110,SP140	-26286,-26336
chr1:151697745-151699410	chr1	+	151697961	151699252	True	NM_001144956,NM_001172649,NM_007185,NM_001172648	chr1,chr1,chr1,chr1	+,-,-,-	RIIAD1,CELF3,CELF3,CELF3	-4006,-9079,-8671,-9169
chr17:75367815-75368153	chr17	+	75367845	75368089	True	NM_001113494,NM_001113493,NR_036200	chr17,chr17,chr17	+,+,-	SEPT9,SEPT9,MIR4316	4075,1182,25097
chr8:91375152-91375799	chr8	+	91375336	91375820	True	NM_004929,NM_001359	chr8,chr8	-,+	CALB1,DECR1	-280229,-361815
chr19:55984529-55985715	chr19	+	55984557	55985707	True	NM_024710,NM_033113	chr19,chr19	-,+	ISOC2,ZNF628	-11508,1991
chr6:27218599-27218859	chr6	+	27218676	27218908	True	NM_005865,NM_033482	chr6,chr6	+,-	PRSS16,POM121L2	-3225,61153
chr4:20802797-20804445	chr4	+	20802849	20804310	True	NM_147181,NM_145048	chr4,chr4	-,+	KCNIP4,PACRGL	48038,-100870
chr8:48069342-48070186	chr8	+	48069359	48070211	True	NR_037168,NM_005195	chr8,chr8	+,-	LOC100287846,CEBPD	30718,580565
chr1:112016633-112018590	chr1	+	112016752	112018524	True	NM_024102,NM_174896	chr1,chr1	-,+	WDR77,C1orf162	-24922,-208
chr1:150206811-150207420	chr1	+	150206879	150207379	True	NM_012113,NM_001136478,NM_001136479,NM_030920	chr1,chr1,chr1,chr1	+,-,-,-	CA14,ANP32E,ANP32E,ANP32E	22838,1175,147,1175
chr8:125551406-125551671	chr8	+	125551413	125551683	True	NM_001146160,NR_027427,NM_005005,NM_032026	chr8,chr8,chr8,chr8	-,-,+,-	TATDN1,TATDN1,NDUFB9,TATDN1	-84,-84,-121,-84
chr14:23824043-23824359	chr14	+	23824059	23824145	True	NM_020372,NM_016609,NM_172314	chr14,chr14,chr14	-,-,+	SLC22A17,SLC22A17,IL25	-2580,-1979,17872
chr2:29144084-29145389	chr2	+	29144318	29145269	True	NM_017910,NR_003074,NR_002741	chr2,chr2,chr2	-,+,+	TRMT61B,SNORD92,SNORD53	-51143,-7853,4663
chr7:100768598-100769736	chr7	+	100768781	100769596	True	NM_003378,NM_001165413,NM_000602	chr7,chr7,chr7	-,+,+	VGF,SERPINE1,SERPINE1	39307,782,782
chr11:46957702-46958186	chr11	+	46957795	46958176	True	NM_024113,NM_001003677,NM_001003676,NM_001003678,NM_002334	chr11,chr11,chr11,chr11,chr11	+,+,+,+,-	C11orf49,C11orf49,C11orf49,C11orf49,LRP4	74,74,74,74,-17622
chr19:33164091-33164685	chr19	+	33164096	33164528	True	NM_207391,NM_032139	chr19,chr19	+,-	RGS9BP,ANKRD27	1784,1624
chr14:74540973-74542282	chr14	+	74541372	74541748	True	NM_005589,NM_001024674	chr14,chr14	-,+	ALDH6A1,LIN52	9504,9907
chr12:54452434-54453006	chr12	+	54452479	54453055	True	NM_153633,NR_026655,NR_026658	chr12,chr12,chr12	+,+,-	HOXC4,FLJ12825,LOC100240735	-4869,-492,22602
chr10:102746442-102746767	chr10	+	102746593	102746807	True	NM_001163812,NM_001163813,NM_001163814,NM_032112,NM_021830,NM_176794,NM_176793,NM_176792	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,-,+,-,-,-	C10orf2,C10orf2,C10orf2,MRPL43,C10orf2,MRPL43,MRPL43,MRPL43	485,485,485,515,485,515,515,515
chr5:71611306-71613282	chr5	+	71611485	71613171	True	NM_015084,NM_024754	chr5,chr5	-,+	MRPS27,PTCD2	2967,3028
chr12:101868857-101869277	chr12	+	101868935	101869304	True	NM_152323,NM_001177	chr12,chr12	+,-	SPIC,ARL1	2030,-67363
chr8:22409854-22410733	chr8	+	22409947	22410689	True	NR_027715,NM_005775	chr8,chr8	-,+	FLJ14107,SORBS3	89083,-747
chrX:16145459-16146357	chrX	+	16145514	16146014	True	NM_005314,NM_003916	chrX,chrX	+,-	GRPR,AP1S2	-4141,-272414
chr22:19166791-19167050	chr22	+	19166795	19167092	True	NM_053006,NM_005984,NR_033687	chr22,chr22,chr22	+,-,-	TSSK2,SLC25A1,SLC25A1	-48525,-494,-761
chr14:35009362-35010109	chr14	+	35009433	35009897	True	NM_018453,NR_002937	chr14,chr14	-,+	EAPP,C14orf19	-490,399230
chr11:504782-505177	chr11	+	504837	505017	True	NM_002939,NM_198075,NM_203389,NM_203388,NM_203387,NM_203386,NM_203385,NM_203384,NM_203383	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,+,-,-,-,-,-,-,-	RNH1,LRRC56,RNH1,RNH1,RNH1,RNH1,RNH1,RNH1,RNH1	1854,32504,2306,2306,2306,2306,1854,1854,1854
chr19:42211169-42211477	chr19	+	42211173	42211517	True	NM_004363,NM_006890	chr19,chr19	+,-	CEACAM5,CEACAM7	1012,-19077
chrX:13835375-13836876	chrX	+	13835563	13836900	True	NM_001001996,NM_001001995,NM_003611,NM_005278	chrX,chrX,chrX,chrX	-,-,+,-	GPM6B,GPM6B,OFD1,GPM6B	-249,-249,-82783,-249
chr11:1856023-1856266	chr11	+	1856022	1856252	True	NM_001145829,NR_036185,NM_138567,NM_001145841,NM_003282	chr11,chr11,chr11,chr11,chr11	+,-,+,+,+	TNNI2,MIR4298,SYT8,TNNI2,TNNI2	4466,24564,-399,5179,3980
chr17:7658219-7658948	chr17	+	7658363	7658928	True	NR_002778,NM_001126114	chr17,chr17	+,-	RPL29P2,TP53	-777,-67500
chr1:247694485-247694904	chr1	+	247694500	247694936	True	NM_145278,NR_027309,NM_198074	chr1,chr1,chr1	+,-,-	C1orf150,LOC148824,OR2C3	17514,-394,2255
chr2:234984229-234984917	chr2	+	234984419	234984917	True	NM_006944,NR_024322	chr2,chr2	+,-	SPP2,MSL3P1	-25124,-207364
chr16:88934092-88934363	chr16	+	88934094	88934256	True	NM_001080487,NM_016209	chr16,chr16	-,+	PABPN1L,TRAPPC2L	-1026,-10639
chr9:140008299-140008502	chr9	+	140008351	140008485	True	NM_013379,NM_000832	chr9,chr9	-,+	DPP7,GRIN1	760,25123
chr22:21991222-21991679	chr22	+	21991246	21991621	True	NM_152612,NM_001017964,NM_022044	chr22,chr22,chr22	+,-,+	CCDC116,YDJC,SDF2L1	-4211,-6906,4920
chr11:124868926-124869644	chr11	+	124868926	124869685	True	NM_152722,NM_025004	chr11,chr11	-,+	HEPACAM,CCDC15	-62618,-44967
chr8:80679715-80680152	chr8	+	80679830	80680048	True	NM_001040708,NM_007029,NM_012258	chr8,chr8,chr8	-,+,-	HEY1,STMN2,HEY1	100,-156832,100
chr11:68779135-68779882	chr11	+	68779231	68779655	True	NM_139075,NM_001098515,NM_145015	chr11,chr11,chr11	+,-,-	TPCN2,MRGPRF,MRGPRF	36694,1245,1245
chr9:127633528-127634280	chr9	+	127633570	127634308	True	NM_007209,NM_030978	chr9,chr9	-,+	RPL35,ARPC5L	-9330,-2137
chrX:57936829-57937874	chrX	+	57937135	57937854	True	NM_007156,NM_007157	chrX,chrX	-,+	ZXDA,ZXDB	-68,-318929
chr14:50088957-50090667	chr14	+	50088959	50090540	True	NM_002408,NM_001001	chr14,chr14	+,-	MGAT2,RPL36AL	-1521,-1610
chr1:43855797-43856194	chr1	+	43855900	43856178	True	NM_001012961,NM_201542,NM_052877	chr1,chr1,chr1	+,-,-	C1orf84,MED8,MED8	-395,-417,-417
chr3:47048599-47048886	chr3	+	47048759	47048821	True	NR_024046,NM_144716	chr3,chr3	+,-	NRADDP,CCDC12	4210,-30489
chr12:133603713-133604193	chr12	+	133603715	133604129	True	NM_003428,NM_001127372,NM_001164715	chr12,chr12,chr12	+,+,-	ZNF84,ZNF84,ZNF605	9748,9850,-70823
chr1:28265557-28266425	chr1	+	28265595	28266485	True	NM_001009568,NM_002946,NM_014474	chr1,chr1,chr1	+,-,+	SMPDL3B,RPA2,SMPDL3B	-4155,-24359,-4155
chr7:144101127-144101431	chr7	+	144101164	144101256	True	NM_005435,NM_001080413	chr7,chr7	+,-	ARHGEF5,NOBOX	-48726,-378
chr2:110942419-110944143	chr2	+	110942615	110943964	True	NR_037626,NM_000272	chr2,chr2	+,-	LOC100507334,NPHP1	59250,18726
chr7:43150955-43152047	chr7	+	43151000	43151888	True	NM_015052,NM_002787	chr7,chr7	+,-	HECW1,PSMA2	309,-179195
chr7:141438162-141438434	chr7	+	141438217	141438433	True	NM_003143,NR_015392	chr7,chr7	+,-	SSBP1,FLJ40852	-92,-187
chr1:145524247-145526022	chr1	+	145524720	145525317	True	NR_002328,NM_003846,NM_001184795,NM_003637	chr1,chr1,chr1,chr1	-,+,+,+	GNRHR2,PEX11B,PEX11B,ITGA10	-8644,-8613,-8218,85
chr3:194074022-194074611	chr3	+	194074127	194074315	True	NM_001080513,NR_033929	chr3,chr3	-,+	CPN2,FLJ34208	-2070,133553
chr4:46992919-46994608	chr4	+	46993295	46994439	True	NM_000809,NM_000812,NM_001204267,NM_001204266	chr4,chr4,chr4,chr4	-,+,-,-	GABRA4,GABRB1,GABRA4,GABRA4	2035,38855,1133,1133
chr3:46444404-46445871	chr3	+	46444984	46445777	True	NM_003965,NM_001199149,NM_001130910	chr3,chr3,chr3	+,-,+	CCRL2,LTF,CCRL2	2943,59435,3271
chr19:9548554-9549552	chr19	+	9548675	9549281	True	NM_198058,NM_006631,NM_001172651	chr19,chr19,chr19	-,-,+	ZNF266,ZNF266,ZNF177	-2441,-2441,-61744
chr3:113270651-113271082	chr3	+	113270759	113270985	True	NM_144718,NM_017699	chr3,chr3	-,+	SPICE1,SIDT1	-36725,-19592
chr3:15104898-15105372	chr3	+	15105000	15105298	True	NM_022497,NM_003298	chr3,chr3	-,+	MRPS25,NR2C2	1568,-115815
chr21:30397230-30397655	chr21	+	30397240	30397707	True	NM_016940,NM_001001992,NM_001032410,NM_006447	chr21,chr21,chr21,chr21	-,+,+,+	RWDD2B,USP16,USP16,USP16	-5555,-353,-353,-353
chr15:52858344-52860290	chr15	+	52859090	52860104	True	NM_006628,NM_002748	chr15,chr15	-,+	ARPP19,MAPK6	1159,-547731
chr17:79358913-79359311	chr17	+	79359065	79359327	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	14212,-54591
chr12:132433905-132434184	chr12	+	132434065	132434209	True	NM_015409,NM_175066	chr12,chr12	+,-	EP400,DDX51	298,194721
chr10:71176603-71177156	chr10	+	71176855	71177119	True	NM_001057,NM_012339	chr10,chr10	-,+	TACR2,TSPAN15	-181,34106
chr17:53344172-53345379	chr17	+	53344177	53345259	True	NM_002126,NM_012329	chr17,chr17	+,-	HLF,MMD	-1907,154132
chr19:58119006-58120172	chr19	+	58119087	58120178	True	NM_020880,NM_003435,NM_017879	chr19,chr19,chr19	+,+,-	ZNF530,ZNF134,ZNF416	-7886,5651,-28844
chr19:35940216-35940524	chr19	+	35940239	35940499	True	NM_005306,NM_207392	chr19,chr19	+,-	FFAR2,KRTDAP	117,40907
chr17:61102708-61103673	chr17	+	61102735	61103662	True	NM_152598,NM_025185	chr17,chr17	-,+	MARCH10,TANC2	-217030,-15888
chr12:56221857-56222422	chr12	+	56221903	56222383	True	NR_036478,NR_036479,NR_036476,NR_036477,NM_032364	chr12,chr12,chr12,chr12,chr12	+,+,+,+,-	LOC440104,LOC440104,LOC440104,LOC440104,DNAJC14	1008,1008,1008,1008,1087
chr2:152957061-152958931	chr2	+	152957077	152958109	True	NM_000726,NM_001005746,NM_052905,NM_001145798	chr2,chr2,chr2,chr2	-,-,+,-	CACNB4,CACNB4,FMNL2,CACNB4	-1484,-1842,233641,-1484
chr1:160062958-160063345	chr1	+	160062977	160063349	True	NM_052868,NM_004983	chr1,chr1	-,+	IGSF8,KCNJ9	5109,-11668
chr17:6982703-6983149	chr17	+	6982926	6983025	True	NM_182906,NM_006344,NM_201566	chr17,chr17,chr17	-,-,+	CLEC10A,CLEC10A,SLC16A13	632,632,-43583
chr14:102225915-102226234	chr14	+	102225917	102226268	True	NM_001161725,NM_001161726,NR_031649	chr14,chr14,chr14	+,+,-	PPP2R5C,PPP2R5C,MIR1247	1866,1866,-199158
chr1:205197918-205198475	chr1	+	205198057	205198282	True	NM_014858,NM_199462	chr1,chr1	+,-	TMCC2,DSTYK	-1070,-17330
chr12:109532930-109533907	chr12	+	109532981	109533552	True	NM_001205179,NM_080911,NM_001205180,NM_001145375,NM_001145374,NM_003362,NM_001001655,NR_026930,NR_026931	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,+,-,-,-,+,-,-,-	ALKBH2,UNG,ALKBH2,ALKBH2,ALKBH2,UNG,ALKBH2,ALKBH2,ALKBH2	-1688,1846,-1688,-1688,-1688,2370,-1688,-1688,-1688
chr19:41699538-41700267	chr19	+	41699637	41700309	True	NM_030622,NM_000660	chr19,chr19	+,-	CYP2S1,TGFB1	-573,159572
chr1:150245398-150246723	chr1	+	150245578	150246615	True	NM_016022,NM_024579,NM_001077628,NM_144697	chr1,chr1,chr1,chr1	-,+,-,+	APH1A,C1orf54,APH1A,C1orf51	-4046,-447,-4046,8613
chr11:112063516-112064353	chr11	+	112063539	112064398	True	NM_001562,NM_001037290	chr11,chr11	-,+	IL18,BCO2	-28699,-16516
chr13:51654945-51655232	chr13	+	51654971	51655236	True	NR_003923,NM_145019	chr13,chr13	-,+	GUCY1B2,FAM124A	-14678,141270
chr2:128437761-128438861	chr2	+	128438078	128438828	True	NM_001161404,NM_001136037,NM_001161403,NM_032740	chr2,chr2,chr2,chr2	-,-,-,+	LIMS2,LIMS2,LIMS2,SFT2D3	582,-5314,-5314,19768
chr11:8933233-8933464	chr11	+	8933306	8933446	True	NM_020642,NM_005418,NM_182901	chr11,chr11,chr11	+,-,+	C11orf17,ST5,C11orf17	-656,-808,-555
chr3:11197999-11199049	chr3	+	11198101	11199091	True	NM_001098212,NR_027102	chr3,chr3	+,-	HRH1,LOC285370	-1938,-392224
chr5:43396414-43396820	chr5	+	43396487	43396856	True	NM_153361,NM_148672	chr5,chr5	+,-	MGC42105,CCL28	-204211,15684
chr6:43542963-43543281	chr6	+	43542963	43543223	True	NM_020750,NM_006502	chr6,chr6	-,+	XPO5,POLH	639,654
chr10:134213552-134213931	chr10	+	134213557	134213927	True	NM_001098637,NM_138499,NM_173575	chr10,chr10,chr10	+,+,-	PWWP2B,PWWP2B,STK32C	-2906,-2906,-92080
chr15:58271630-58272636	chr15	+	58271653	58272677	True	NM_020980,NM_170697	chr15,chr15	+,-	AQP9,ALDH1A2	157730,33608
chr7:127222721-127224279	chr7	+	127222873	127224136	True	NM_024523,NM_020369,NM_001662	chr7,chr7,chr7	-,+,+	GCC1,FSCN3,ARF5	1575,9552,4269
chr8:30669311-30669591	chr8	+	30669418	30669496	True	NM_001009552,NM_005671	chr8,chr8	-,+	PPP2CB,UBXN8	906,-67779
chr13:19964856-19965953	chr13	+	19964904	19965678	True	NR_034026,NR_027248	chr13,chr13	+,-	LOC100287114,ANKRD26P3	-45766,-45791
chr12:117796998-117797601	chr12	+	117797060	117797591	True	NM_000620,NM_001204218,NM_153348	chr12,chr12,chr12	-,-,+	NOS1,NOS1,FBXW8	2066,2066,-448350
chr15:72401448-72402496	chr15	+	72401752	72402324	True	NM_145204,NM_006901,NM_001172109,NM_001166340,NM_001172111,NM_001172110	chr15,chr15,chr15,chr15,chr15,chr15	+,-,+,+,+,+	SENP8,MYO9A,SENP8,SENP8,SENP8,SENP8	8306,8152,6867,4274,8306,6921
chr10:54074824-54075613	chr10	+	54074856	54075639	True	NM_012242,NM_000242	chr10,chr10	+,-	DKK1,MBL2	-866,455871
chr18:2570194-2570849	chr18	+	2570193	2570807	True	NM_006101,NM_022840	chr18,chr18	+,-	NDC80,METTL4	702,732
chr19:47617187-47617700	chr19	+	47617217	47617616	True	NM_015168,NM_001145713	chr19,chr19	-,+	ZC3H4,SAE1	-208,16463
chr12:2901650-2901926	chr12	+	2901697	2901843	True	NM_002014,NR_033958	chr12,chr12	+,-	FKBP4,LOC283440	2264,-20862
chr4:3546247-3546681	chr4	+	3546449	3546681	True	NM_002337,NM_173660	chr4,chr4	-,+	LRPAP1,DOK7	-12225,-81467
chrX:128657626-128657920	chrX	+	128657755	128657965	True	NM_003069,NM_000276,NM_139035	chrX,chrX,chrX	-,+,-	SMARCA1,OCRL,SMARCA1	-295,16286,-295
chr16:81110993-81111240	chr16	+	81111038	81111288	True	NM_152337,NM_015251,NM_001100873	chr16,chr16,chr16	-,+,-	C16orf46,ATMIN,C16orf46	-166,-41631,-166
chrX:154026114-154027168	chrX	+	154026384	154026888	True	NM_001166462,NR_002984,NM_001166460,NM_001166461,NM_002436	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	MPP1,SNORA56,MPP1,MPP1,MPP1	6964,-23170,6964,6964,6964
chr19:39687096-39687596	chr19	+	39687097	39687631	True	NM_001080468,NM_001001414	chr19,chr19	-,+	SYCN,NCCRP1	7325,-28
chr9:67290049-67290834	chr9	+	67290085	67290883	True	NM_032250,NR_002817	chr9,chr9	+,-	ANKRD20A1,AQP7P1	635877,-593
chr9:67290049-67290834	chr9	-	42856851	42857317	False	NR_026759,NR_026558	chr9,chr9	-,+	FAM95B1,AQP7P3	176045,834
chr9:67290049-67290834	chr9	-	67029840	67030306	False	NR_024443,NR_024496	chr9,chr9	-,+	LOC100133920,LOC442421	726,-535622
chr9:67290049-67290834	chr9	+	69652036	69652502	False	NM_001085457,NR_024443	chr9,chr9	-,+	CBWD6,LOC100133920	-389443,-726
chr11:95657354-95657583	chr11	+	95657427	95657623	True	NM_201278,NM_014679,NM_016156,NM_201281,NR_023356	chr11,chr11,chr11,chr11,chr11	-,+,-,-,-	MTMR2,CEP57,MTMR2,MTMR2,MTMR2	-56,-133836,-56,-56,-56
chr1:154648552-154649912	chr1	+	154649259	154649621	True	NM_000748,NM_001025107	chr1,chr1	+,-	CHRNB2,ADAR	-109053,-48803
chr20:32899756-32900074	chr20	+	32899885	32900075	True	NM_031483,NM_001161766,NM_000687	chr20,chr20,chr20	+,-,-	ITCH,AHCY,AHCY	50986,-277,-8670
chr3:154146572-154147108	chr3	+	154146687	154147077	True	NM_001038705,NM_015595	chr3,chr3	-,+	GPR149,ARHGEF26	477,-307589
chr19:50889715-50890169	chr19	+	50889789	50889949	True	NM_002691,NM_004851	chr19,chr19	+,-	POLD1,NAPSA	-2247,-20858
chr16:22306927-22308148	chr16	+	22307165	22308193	True	NM_018119,NM_001802	chr16,chr16	+,-	POLR3E,CDR2	547,77795
chr14:38065382-38065604	chr14	+	38065404	38065628	True	NM_138731,NM_004496	chr14,chr14	+,-	MIPOL1,FOXA1	-398337,-915
chr1:14726587-14727226	chr1	+	14726638	14727220	True	NM_015209,NR_027136	chr1,chr1	+,-	KAZN,C1orf126	197992,751790
chr17:41015397-41017114	chr17	+	41016301	41017045	True	NR_002773,NR_027254	chr17,chr17	+,-	AOC4,LOC388387	2116,33756
chrX:18689133-18689780	chrX	+	18689240	18689801	True	NM_000330,NM_006240	chrX,chrX	-,+	RS1,PPEF1	479,19243
chr19:1268902-1269287	chr19	+	1268924	1269276	True	NR_027271,NM_017914,NR_023313,NM_001280,NR_023312	chr19,chr19,chr19,chr19,chr19	-,+,+,+,+	C19orf23,C19orf24,CIRBP,CIRBP,CIRBP	1033,6243,-10,-10,-10
chr20:31818004-31819306	chr20	+	31818003	31818630	True	NM_016583,NM_016082,NM_130852	chr20,chr20,chr20	+,-,+	PLUNC,CDK5RAP1,PLUNC	5171,170764,5171
chr15:55611481-55611879	chr15	+	55611512	55611858	True	NM_004855,NM_183235	chr15,chr15	+,-	PIGB,RAB27A	-430,-29511
chr19:6376649-6378333	chr19	+	6376704	6378373	True	NM_004158,NM_032306	chr19,chr19	-,+	PSPN,ALKBH7	-844,-4311
chr7:1572301-1572820	chr7	+	1572367	1572751	True	NM_002360,NM_001097620	chr7,chr7	+,-	MAFK,TMEM184A	-2050,23365
chr1:151761625-151762614	chr1	+	151761646	151762644	True	NM_016178,NM_006862,NM_001083963,NM_001083965,NM_001083964	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	OAZ3,TDRKH,TDRKH,TDRKH,TDRKH	-22569,416,416,416,416
chr17:37618911-37619190	chr17	+	37619043	37619109	True	NM_004774,NM_016507,NM_015083	chr17,chr17,chr17	-,+,+	MED1,CDK12,CDK12	-11516,-1355,-1355
chr4:140374540-140374796	chr4	+	140374550	140374842	True	NM_031296,NM_030648	chr4,chr4	+,-	RAB33B,SETD7	118,102785
chr16:56643128-56643779	chr16	+	56643496	56643758	True	NR_001447,NM_005953,NM_005950	chr16,chr16,chr16	+,+,-	MT1L,MT2A,MT1G	7614,-1069,58269
chr8:101167945-101169440	chr8	+	101168338	101169472	True	NM_172218,NM_003114,NM_005034,NR_036491	chr8,chr8,chr8,chr8	+,+,+,-	SPAG1,SPAG1,POLR2K,FBXO43	790,1090,-5551,-10239
chr14:100845883-100847358	chr14	+	100847125	100847387	True	NM_001161476,NM_173701,NM_024515,NM_004184,NM_213646,NM_213645	chr14,chr14,chr14,chr14,chr14,chr14	+,-,+,-,-,-	WDR25,WARS,WDR25,WARS,WARS,WARS	-4430,-4445,-4352,-5198,-5198,-4445
chr11:59436023-59436278	chr11	+	59436137	59436207	True	NM_152716,NM_001178040	chr11,chr11	-,+	PATL1,STX3	354,86324
chr9:134583736-134585115	chr9	+	134583753	134585075	True	NM_007171,NM_198679	chr9,chr9	+,-	POMT1,RAPGEF1	-205515,211
chr8:145735532-145736437	chr8	+	145735775	145736323	True	NM_005309,NM_004260,NM_014665,NM_138431	chr8,chr8,chr8,chr8	+,-,+,+	GPT,RECQL4,LRRC14,MFSD3	-6361,6937,7039,-1274
chr22:24115361-24115683	chr22	+	24115364	24115732	True	NM_213720,NM_005940	chr22,chr22	-,+	CHCHD10,MMP11	-5223,-379
chr7:14029013-14029478	chr7	+	14029026	14029418	True	NM_001163150,NM_004956,NM_001163151,NM_001163147,NM_005738,NM_001163152,NM_001163148,NM_001163149	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,+,-,-,-	ETV1,ETV1,ETV1,ETV1,ARL4A,ETV1,ETV1,ETV1	-2887,274,-2887,274,-1302166,-2887,1682,1497
chr3:49834870-49835875	chr3	+	49835210	49835735	True	NM_001007540,NM_203370	chr3,chr3	-,+	CDHR4,C3orf54	1578,4951
chr16:67564549-67565506	chr16	+	67564667	67565365	True	NM_001138,NM_001193524,NM_001193523,NM_001193522,NM_024519	chr16,chr16,chr16,chr16,chr16	-,+,+,+,+	AGRP,FAM65A,FAM65A,FAM65A,FAM65A	-46951,5999,-1178,-1998,-2001
chr11:67271545-67271756	chr11	+	67271569	67271675	True	NM_003977,NM_005851,NM_004910,NM_001130848	chr11,chr11,chr11,chr11	+,-,-,-	AIP,CDK2AP2,PITPNM1,PITPNM1	-21115,4477,1218,1218
chr7:45193847-45194276	chr7	+	45194084	45194290	True	NM_199122,NM_005856	chr7,chr7	-,+	TBRG4,RAMP3	-42767,3076
chr17:48276923-48277163	chr17	+	48276955	48277023	True	NM_001135697,NM_000088	chr17,chr17	+,-	SGCA,COL1A1	-33640,2027
chr11:67346475-67346787	chr11	+	67346697	67346801	True	NM_000852,NR_033791	chr11,chr11	+,-	GSTP1,DOC2GP	4264,36384
chr11:77851070-77851451	chr11	+	77851070	77851326	True	NM_024079,NM_001007027,NM_020798	chr11,chr11,chr11	-,-,+	ALG8,ALG8,USP35	-371,-371,48531
chr6:29364006-29364416	chr6	+	29364098	29364182	True	NM_013936,NM_030959	chr6,chr6	+,-	OR12D2,OR12D3	233,-21030
chr13:50573495-50575145	chr13	+	50573515	50574981	True	NM_005798,NM_052811,NR_037407,NM_001007278,NM_213590	chr13,chr13,chr13,chr13,chr13	+,+,-,+,+	TRIM13,TRIM13,MIR3613,TRIM13,TRIM13	-2426,-2426,-2878,-2426,-2426
chr19:22954678-22955401	chr19	+	22954812	22955129	True	NM_020855,NM_001080409	chr19,chr19	+,-	ZNF492,ZNF99	-137749,-2028
chr10:25242250-25242495	chr10	+	25242268	25242532	True	NM_020200,NM_024838	chr10,chr10	-,+	PRTFDC1,THNSL1	-735,62975
chr18:47087467-47087851	chr18	+	47087495	47087845	True	NM_001035006,NM_006033	chr18,chr18	-,+	RPL17,LIPG	-68560,581
chr11:74107158-74107550	chr11	+	74107328	74107455	True	NM_173582,NM_006591	chr11,chr11	-,+	PGM2L1,POLD3	2106,196173
chr9:95520990-95522241	chr9	+	95521359	95522259	True	NR_026868,NM_015250,NM_001003800	chr9,chr9,chr9	+,-,-	ANKRD19,BICD2,BICD2	49633,4874,4874
chr16:2199700-2200048	chr16	+	2199968	2200074	True	NR_002736,NM_014353,NM_032271	chr16,chr16,chr16	-,+,+	SNORD60,RAB26,TRAF7	5082,-1368,5724
chr19:5979314-5980054	chr19	+	5979605	5979910	True	NM_080590,NM_007322,NM_003624,NM_007320	chr19,chr19,chr19,chr19	+,-,-,-	CAPS,RANBP3,RANBP3,RANBP3	-65470,-1285,-1285,-1285
chr19:12945029-12945700	chr19	+	12945313	12945719	True	NM_001080997,NM_014975,NM_031429	chr19,chr19,chr19	-,+,-	RTBDN,MAST1,RTBDN	-4106,3539,561
chr2:17997115-17997929	chr2	+	17997120	17997814	True	NM_001105569,NM_024624	chr2,chr2	+,-	MSGN1,SMC6	-29,-62024
chr7:74268942-74270225	chr7	+	74269744	74270166	True	NM_173537,NR_027775	chr7,chr7	-,+	GTF2IRD2,PMS2P5	-1903,36727
chr7:74268942-74270225	chr7	-	74506061	74506483	False	NM_030798,NM_001003795	chr7,chr7	-,+	WBSCR16,GTF2IRD2B	-16362,1863
chr1:154596369-154598189	chr1	+	154596531	154597932	True	NM_000748,NM_001025107	chr1,chr1	+,-	CHRNB2,ADAR	-56325,2574
chr18:19747222-19747613	chr18	+	19747229	19747577	True	NM_005257,NM_172241	chr18,chr18	+,-	GATA6,CTAGE1	1838,250353
chr1:36554477-36554682	chr1	+	36554610	36554682	True	NM_017825,NM_005202,NM_014466	chr1,chr1,chr1	+,-,+	ADPRHL2,COL8A2,TEKT2	-208,11218,-4985
chr9:140512369-140512692	chr9	+	140512379	140512655	True	NM_024757,NM_001145527	chr9,chr9	+,+	EHMT1,EHMT1	788,788
chr14:21852220-21852742	chr14	+	21852317	21852771	True	NM_014828,NR_003029,NM_007192	chr14,chr14,chr14	+,-,-	TOX4,SNORD9,SUPT16H	92563,7691,34
chr5:172757072-172758685	chr5	+	172757218	172758564	True	NM_013980,NM_003714	chr5,chr5	+,-	BNIP1,STC2	-185824,-712
chr21:11094831-11096610	chr7	+	152091068	152091127	True	NR_002935,NM_170606	chr7,chr7	+,-	FABP5P3,MLL3	42852,42022
chr14:22039928-22041469	chr14	+	22040115	22041273	True	NM_001001912,NM_001005465	chr14,chr14	+,-	OR4E2,OR10G3	92023,-1240
chr7:47841711-47842924	chr7	+	47841854	47842786	True	NM_025031,NM_138295	chr7,chr7	+,-	C7orf69,PKD1L1	-7020,145335
chr2:27662274-27664168	chr2	+	27662531	27663952	True	NM_177983,NM_173853,NM_001168364	chr2,chr2,chr2	-,+,+	PPM1G,KRTCAP3,KRTCAP3	-30035,1280,1280
chr17:78006787-78007262	chr17	+	78006795	78007091	True	NM_017950,NM_019020	chr17,chr17	+,-	CCDC40,TBC1D16	3343,2616
chr16:1663061-1663551	chr16	+	1663251	1663545	True	NM_020825,NM_014714	chr16,chr16	+,-	CRAMP1L,IFT140	1095,-1142
chr2:229462752-229463577	chr2	+	229462976	229463250	True	NM_178821,NM_030623	chr2,chr2	+,-	WDR69,SPHKAP	-726707,-416615
chr2:107120897-107122306	chr2	+	107121188	107122297	True	NM_001144013,NR_003506	chr2,chr2	-,+	RGPD3,PLGLA	-36387,-118471
chr2:107120897-107122306	chr2	-	87070526	87071635	False	NR_037931,NM_001178100	chr2,chr2	+,-	LOC100286979,CD8B	17312,17463
chr5:93910171-93910589	chr5	+	93910284	93910631	True	NM_001145678,NM_032290	chr5,chr5	-,+	KIAA0825,ANKRD32	43728,43759
chr1:20495535-20496339	chr1	+	20495571	20496335	True	NM_001105572,NM_152376	chr1,chr1	-,+	PLA2G2C,UBXN10	5402,16242
chrX:48937909-48938192	chrX	+	48937980	48938050	True	NM_007213,NM_001163323,NM_001029896	chrX,chrX,chrX	-,+,-	PRAF2,CCDC120,WDR45	-6318,-21508,-416
chr5:156487630-156488640	chr5	+	156487639	156488449	True	NM_001099414,NM_012206,NM_001173393,NM_005546	chr5,chr5,chr5,chr5	-,-,-,+	HAVCR1,HAVCR1,HAVCR1,ITK	-2152,-2152,-1669,119457
chr17:3818277-3818771	chr17	+	3818323	3818813	True	NM_002558,NM_031965	chr17,chr17	-,+	P2RX1,GSG2	1197,-191177
chr22:47134461-47134743	chr22	+	47134526	47134592	True	NM_022766,NM_014346	chr22,chr22	-,+	CERK,TBC1D22A	-374,23925
chr17:74303156-74303634	chr17	+	74303178	74303626	True	NM_032134,NM_182565	chr17,chr17	-,+	QRICH2,FAM100B	185,-41943
chr19:17797272-17797540	chr19	+	17797307	17797575	True	NM_001080421,NM_018174	chr19,chr19	-,+	UNC13A,MAP1S	1483,32727
chr22:30877187-30878886	chr22	+	30877192	30878071	True	NR_001580,NM_174975,NM_016498	chr22,chr22,chr22	-,-,+	SDC4P,SEC14L3,MTFP1	113,-9158,-55632
chr12:42527437-42527718	chr12	+	42527441	42527671	True	NM_001099650,NM_201438	chr12,chr12	-,+	GXYLT1,PPHLN1	11054,192275
chr14:90725142-90726124	chr14	+	90725195	90725881	True	NM_017970,NM_002802	chr14,chr14	-,+	C14orf102,PSMC1	72456,-2361
chr19:58664635-58665467	chr19	+	58664767	58665080	True	NM_024620,NM_133502	chr19,chr19	-,+	ZNF329,ZNF274	-2619,29315
chr2:70420582-70421446	chr2	+	70420666	70420958	True	NM_016297,NM_017880	chr2,chr2	+,-	PCYOX1,C2orf42	64272,-2515
chr2:133030062-133031265	chr2	+	133030437	133031222	True	NM_001508,NR_027020	chr2,chr2	+,-	GPR39,ANKRD30BL	142924,-14895
chr19:18724171-18724616	chr19	+	18724170	18724580	True	NM_012109,NM_004750	chr19,chr19	+,-	TMEM59L,CRLF1	-539,-6510
chr20:60699308-60700775	chr20	+	60699323	60700599	True	NM_144703,NM_002792	chr20,chr20	+,-	LSM14B,PSMA7	-1857,17925
chr18:37309257-37310394	chr18	+	37309325	37310213	True	NR_024391,NR_036202	chr18,chr18	-,+	LOC647946,MIR4318	21804,-2072290
chr13:53031323-53032852	chr13	+	53031388	53032590	True	NM_001098525,NM_016075,NM_018204	chr13,chr13,chr13	+,-,+	CKAP2,VPS36,CKAP2	-1955,-6625,-1955
chr14:103593332-103593622	chr14	+	103593331	103593537	True	NR_033938,NM_006291	chr14,chr14	-,+	LOC100131366,TNFAIP2	61878,-718
chr9:114247532-114248461	chr9	+	114247719	114248180	True	NM_001080398,NM_133464	chr9,chr9	-,+	KIAA0368,ZNF483	-694,39266
chr3:44621061-44621741	chr3	+	44621140	44621726	True	NM_173658,NM_181489	chr3,chr3	+,-	ZNF660,ZNF445	4729,-101978
chr19:46106635-46107116	chr19	+	46106640	46106908	True	NM_005282,NM_000164	chr19,chr19	-,+	GPR4,GIPR	-1174,64593
chr21:14983074-14984331	chr21	+	14983202	14983269	True	NR_036164,NM_174981	chr21,chr21	-,+	MIR3156-3,POTED	-204421,-755
chr2:201400201-201400448	chr2	+	201400318	201400480	True	NM_001160033,NM_152524,NM_152387,NM_001160046	chr2,chr2,chr2,chr2	+,+,-,+	SGOL2,SGOL2,KCTD18,SGOL2	-9504,-9504,-25526,-9504
chr7:143695062-143696864	chr7	+	143695481	143696883	True	NM_014719,NM_001005281	chr7,chr7	-,+	FAM115A,OR6B1	-96309,4206
chr5:133703358-133704232	chr5	+	133703484	133703988	True	NM_016508,NM_003337,NM_001113575	chr5,chr5,chr5	-,+,-	CDKL3,UBE2B,CDKL3	-719,2881,-719
chr5:178367079-178367815	chr5	+	178367124	178367564	True	NM_182594,NM_000843,NM_001178090,NM_001178089	chr5,chr5,chr5,chr5	+,-,+,+	ZNF454,GRM6,ZNF454,ZNF454	629,54610,629,629
chr14:35591703-35591936	chr14	+	35591742	35591870	True	NM_017917,NM_014672	chr14,chr14	-,+	PPP2R3C,KIAA0391	-223,-17
chr2:237176933-237177528	chr2	+	237177130	237177435	True	NM_020311,NM_212556	chr2,chr2	+,-	CXCR7,ASB18	300944,-4142
chr11:61122499-61123183	chr11	+	61122672	61123230	True	NM_153611,NM_016464,NM_001161452,NM_001161454,NR_028473	chr11,chr11,chr11,chr11,chr11	-,+,-,-,+	CYBASC3,TMEM138,CYBASC3,CYBASC3,TMEM138	6575,6242,1181,6575,6242
chr3:126113924-126114666	chr3	+	126113951	126114627	True	NM_182628,NM_014079	chr3,chr3	+,-	CCDC37,KLF15	-220,-37715
chr3:50376004-50376214	chr3	+	50376006	50376256	True	NM_015896,NM_007022,NM_007182,NM_170713,NM_170712,NM_170714	chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-	ZMYND10,CYB561D2,RASSF1,RASSF1,RASSF1,RASSF1	6950,12040,2161,-1111,-342,2161
chr4:165950009-165951398	chr4	+	165950325	165951346	True	NM_001012414,NM_152620	chr4,chr4	-,+	TRIM61,TRIM60	-51507,1804
chr11:818464-818973	chr11	+	818487	818979	True	NM_001004,NM_145887,NR_002585,NM_020376,NM_173584	chr11,chr11,chr11,chr11,chr11	+,-,+,+,+	RPLP2,LRDD,SNORA52,PNPLA2,EFCAB4A	-8602,-13237,-6857,61,8605
chr19:52004262-52004467	chr19	+	52004307	52004375	True	NM_053003,NM_033329,NM_001080405	chr19,chr19,chr19	-,-,+	SIGLEC12,SIGLEC12,CEACAM18	718,-660,-24520
chr19:52004262-52004467	chr19	-	51646244	51646294	False	NM_014385,NM_145232,NM_016543	chr19,chr19,chr19	+,-,+	SIGLEC7,CTU1,SIGLEC7	-737,-34597,-737
chr2:243031559-243031883	chr2	+	243031672	243031900	True	NM_005018	chr2	-	PDCD1	-230614
chr2:243031559-243031883	chr8	+	357784	357992	False	NM_175075,NM_183420,NM_183421,NM_012173	chr8,chr8,chr8,chr8	-,+,+,+	C8orf42,FBXO25,FBXO25,FBXO25	137389,-1035,-1035,-1035
chrX:48648227-48648580	chrX	+	48648240	48648570	True	NM_002049,NM_013271	chrX,chrX	+,-	GATA1,PCSK1N	-3310,45440
chr9:79011917-79012450	chr9	+	79012240	79012359	True	NR_026890,NM_018339	chr9,chr9	+,-	RPSAP9,RFK	1155,-2796
chr12:104682637-104683254	chr12	+	104682726	104683245	True	NM_006166,NM_003330,NM_182743,NM_182729,NM_182742	chr12,chr12,chr12,chr12,chr12	-,+,+,+,+	NFYB,TXNRD1,TXNRD1,TXNRD1,TXNRD1	-150686,-2050,-2050,-2050,-2050
chr17:46689696-46690270	chr17	+	46689702	46690208	True	NM_004502,NM_024016,NM_018952,NR_033205	chr17,chr17,chr17,chr17	-,-,-,+	HOXB7,HOXB8,HOXB6,LOC404266	-1319,2149,-7368,-16433
chr19:783471-783699	chr19	+	783473	783653	True	NM_024888,NM_002819	chr19,chr19	-,+	LPPR3,PTBP1	38349,13738
chr3:132147257-132147620	chr3	+	132147429	132147537	True	NM_032169,NM_015268	chr3,chr3	-,+	ACAD11,DNAJC13	231498,-10929
chr8:121814015-121815029	chr8	+	121814130	121815066	True	NM_021021,NM_022045	chr8,chr8	-,+	SNTB1,MTBP	9295,-356515
chr17:40071643-40072922	chr17	+	40071645	40072610	True	NM_031421,NM_198830,NM_001096	chr17,chr17,chr17	+,-,-	TTC25,ACLY,ACLY	14277,2713,2713
chr9:136448049-136448775	chr9	+	136448122	136448714	True	NM_014694,NM_001080515	chr9,chr9	+,-	ADAMTSL2,FAM163B	-48200,-2754
chr6:33770084-33771015	chr6	+	33770404	33770943	True	NM_002224,NM_002418,NM_001184698,NM_001040109	chr6,chr6,chr6,chr6	+,-,-,-	ITPR3,MLN,MLN,MLN	-181299,900,900,900
chr2:120190950-120191438	chr2	+	120191157	120191469	True	NM_001017927,NM_183240	chr2,chr2	-,+	C2orf76,TMEM37	-66899,-1762
chr8:48921984-48923052	chr8	+	48922123	48922502	True	NM_003350,NM_006904	chr8,chr8	+,-	UBE2V2,PRKDC	-1189,-49380
chr9:134310174-134310404	chr9	+	134310173	134310387	True	NM_001135954,NM_013318	chr9,chr9	-,+	UCK1,PRRC2B	96335,-4747
chr11:2181603-2182033	chr11	+	2181659	2181889	True	NR_028044,NM_000207,NR_003512,NM_001185098,NM_001042376,NM_001185097	chr11,chr11,chr11,chr11,chr11,chr11	+,-,-,-,-,-	IGF2AS,INS,INS-IGF2,INS,INS-IGF2,INS	-19955,600,600,600,600,600
chr11:60621271-60622944	chr11	+	60621398	60622968	True	NM_207341,NM_004778,NM_024098	chr11,chr11,chr11	+,-,+	ZP1,GPR44,CCDC86	12046,526,-12024
chr17:36608129-36608817	chr17	+	36608257	36608799	True	NM_001004334,NM_001199417	chr17,chr17	-,+	GPR179,ARHGAP23	-108564,-23588
chr2:32852645-32853067	chr2	+	32852645	32852949	True	NM_017735,NM_021209,NM_001193509	chr2,chr2,chr2	+,-,+	TTC27,NLRC4,TTC27	137,-361833,137
chr2:29201070-29202029	chr2	+	29201209	29201922	True	NM_199280,NM_001029883	chr2,chr2	+,-	FAM179A,C2orf71	2241,95255
chr10:103599703-103600349	chr10	+	103599711	103600296	True	NM_024747,NM_173195,NM_173191,NM_173192,NM_173193,NM_173194,NM_014591,NM_173197	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,-,-,-,-,-,-,-	HPS6,KCNIP2,KCNIP2,KCNIP2,KCNIP2,KCNIP2,KCNIP2,KCNIP2	224827,3431,3431,3431,3431,-100,3431,3431
chrX:1571772-1572248	chrY	+	1521897	1522143	False	NR_026711,NM_001173474,NM_001173473,NM_004192	chrY,chrY,chrY,chrY	+,-,-,-	ASMTL-AS1,ASMTL,ASMTL,ASMTL	-52524,-27,562,-27
chrX:1571772-1572248	chrX	+	1571897	1572143	True	NR_026711,NM_001173474,NM_001173473,NM_004192	chrX,chrX,chrX,chrX	+,-,-,-	ASMTL-AS1,ASMTL,ASMTL,ASMTL	-52524,-27,562,-27
chr5:90676186-90676604	chr5	+	90676190	90676651	True	NM_020801,NR_027435	chr5,chr5	-,+	ARRDC3,LOC100129716	2548,-77
chr17:72684408-72685554	chr17	+	72684798	72685123	True	NM_175738,NM_139018	chr17,chr17	+,-	RAB37,CD300LF	-17596,24044
chr1:16682010-16682273	chr1	+	16682119	16682287	True	NM_018994,NM_001114600	chr1,chr1	-,+	FBXO42,C1orf144	-3171,11295
chr5:140861240-140862358	chr5	+	140861697	140862265	True	NM_002588,NM_018929,NM_018928,NM_001079812,NM_032406,NM_032407,NM_032402,NM_032403	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,-,+,+,+,+	PCDHGC3,PCDHGC5,PCDHGC4,DIAPH1,PCDHGC4,PCDHGC5,PCDHGC3,PCDHGC3	-6188,6542,2475,136409,2475,6542,-6188,-6188
chr17:72859289-72860033	chr17	+	72859297	72859857	True	NM_000835,NM_178160,NM_004110,NM_024417	chr17,chr17,chr17,chr17	-,+,-,-	GRIN2C,OTOP2,FDXR,FDXR	-3290,60512,9349,9349
chr19:41277582-41278726	chr19	+	41277600	41278412	True	NR_037791,NM_198476,NM_006533,NR_037775,NM_001202553,NM_016154	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+	RAB4B-EGLN2,C19orf54,MIA,MIA-RAB4B,MIA,RAB4B	5711,-21772,2869,3029,2669,5711
chr2:69240846-69241296	chr2	+	69241138	69241315	True	NM_032208,NM_182536,NM_053034,NM_018153	chr2,chr2,chr2,chr2	+,-,+,+	ANTXR1,GKN2,ANTXR1,ANTXR1	-913,-61036,-913,-913
chr16:8963227-8963550	chr16	+	8963227	8963580	True	NM_014316,NM_001042476,NM_000303	chr16,chr16,chr16	-,-,+	CARHSP1,CARHSP1,PMM2	-364,-979,-71610
chr4:71767927-71768127	chr4	+	71768078	71768140	True	NM_002092,NM_173468	chr4,chr4	-,+	GRSF1,MOBKL1A	-62451,-65
chr3:64671606-64671888	chr3	+	64671649	64671883	True	NM_182920,NR_030317	chr3,chr3	-,+	ADAMTS9,MIR548A2	1532,33799
chr8:41903425-41903908	chr8	+	41903512	41903670	True	NM_001134296,NM_001099412,NM_001099413,NM_006766	chr8,chr8,chr8,chr8	+,-,-,-	AP3M2,MYST3,MYST3,MYST3	106793,5891,5891,5891
chr8:26168816-26169039	chr8	+	26168846	26169016	True	NM_001177591,NM_007257	chr8,chr8	+,-	PPP2R2A,PNMA2	-18172,202525
chr1:211433653-211433895	chr1	+	211433679	211433893	True	NM_001136225,NM_001136224,NM_172362,NM_001136223,NM_018254	chr1,chr1,chr1,chr1,chr1	+,+,-,+,+	RCOR3,RCOR3,KCNH1,RCOR3,RCOR3	-1022,-1022,-126222,-1022,-441
chr8:29121008-29122193	chr8	+	29121014	29121879	True	NM_015254,NM_024567	chr8,chr8	-,+	KIF13B,HMBOX1	-404,-372840
chr15:51055233-51055815	chr15	+	51055277	51055804	True	NM_032802,NM_007347	chr15,chr15	-,+	SPPL2A,AP4E1	2163,145141
chr17:56352384-56352881	chr17	+	56352541	56352911	True	NR_027647,NM_000250	chr17,chr17	+,-	LPO,MPO	-36806,5435
chr8:58914262-58915834	chr8	+	58914261	58915872	True	NM_000780,NM_147189	chr8,chr8	-,+	CYP7A1,FAM110B	496898,-7205
chr11:129012088-129013418	chr11	+	129012177	129013447	True	NM_001142685,NM_003658	chr11,chr11	-,+	ARHGAP32,BARX2	48696,232433
chrX:151082632-151083318	chrX	+	151082923	151083347	True	NR_029973,NM_002362,NM_001011548,NM_001011549,NM_001011550	chrX,chrX,chrX,chrX,chrX	-,+,+,+,+	MIR452,MAGEA4,MAGEA4,MAGEA4,MAGEA4	44887,1361,-1613,2049,3412
chrX:151082632-151083318	chrX	+	151087684	151087734	False	NR_029973,NM_002362,NM_001011548,NM_001011549,NM_001011550	chrX,chrX,chrX,chrX,chrX	-,+,+,+,+	MIR452,MAGEA4,MAGEA4,MAGEA4,MAGEA4	40500,-3026,-6374,-2338,-975
chrX:151082632-151083318	chrX	+	151084967	151085391	False	NR_029973,NM_002362,NM_001011548,NM_001011549,NM_001011550	chrX,chrX,chrX,chrX,chrX	-,+,+,+,+	MIR452,MAGEA4,MAGEA4,MAGEA4,MAGEA4	42843,-309,-3657,5,1368
chr22:45608343-45608871	chr22	+	45608541	45608886	True	NM_015264,NM_153645	chr22,chr22	-,+	KIAA0930,NUP50	-194,-48040
chr6:4709059-4709590	chr6	+	4709305	4709440	True	NR_026590,NM_006638	chr6,chr6	+,-	CDYL,RPP40	-2963,294884
chr1:150255888-150257667	chr1	+	150255960	150257589	True	NM_018997,NM_016022,NM_144697,NM_031901	chr1,chr1,chr1,chr1	+,-,+,+	MRPS21,APH1A,C1orf51,MRPS21	8679,-14428,-783,8679
chr5:140745428-140746825	chr5	+	140745437	140746722	True	NM_018924,NM_032086,NM_032097,NM_018923,NM_032096,NM_032054,NM_018918,NM_018919,NM_005642	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,+,+,-	PCDHGB3,PCDHGA6,PCDHGB3,PCDHGB2,PCDHGB2,PCDHGA5,PCDHGA5,PCDHGA6,TAF7	3239,6928,3239,-5785,-5785,-1590,-1590,6928,-45086
chr15:56508726-56510443	chr15	+	56509140	56510145	True	NM_022841,NM_198524	chr15,chr15	-,+	RFX7,TEX9	25388,147498
chr9:90590167-90591310	chr9	+	90590265	90591084	True	NM_001039803,NM_001145124,NM_001170640,NM_178432,NM_001170639,NM_012119	chr9,chr9,chr9,chr9,chr9,chr9	-,+,-,-,-,-	CDK20,FAM75C1,CDK20,CDK20,CDK20,CDK20	-570,-57439,-570,-570,-570,-570
chr3:124650024-124651509	chr3	+	124650930	124651540	True	NM_033049,NR_033437	chr3,chr3	-,+	MUC13,UMPS	2105,-201776
chr2:183731395-183731898	chr2	+	183731483	183731813	True	NM_018981,NM_001463	chr2,chr2	+,-	DNAJC10,FRZB	-150535,9
chr12:104351034-104351536	chr12	+	104351178	104351418	True	NM_003211,NM_001135570	chr12,chr12	+,-	TDG,C12orf73	8174,-185
chr15:43880802-43882128	chr15	+	43880842	43881800	True	NM_001190214,NM_014659,NM_001130858,NM_001130859,NM_020990	chr15,chr15,chr15,chr15,chr15	-,-,-,-,+	PPIP5K1,PPIP5K1,PPIP5K1,PPIP5K1,CKMT1B	702,-3752,702,702,3451
chr15:43880802-43882128	chr15	+	43980674	43981632	False	NM_001015001,NM_172097	chr15,chr15	+,-	CKMT1A,CATSPER2	3451,-39635
chr2:179654356-179655490	chr2	+	179654669	179655508	True	NM_019091,NM_003319	chr2,chr2	+,-	PLEKHA3,TTN	-309533,16697
chr17:35969587-35970330	chr17	+	35969723	35970146	True	NM_007247,NM_007026,NM_198882,NM_001163546,NM_001163547,NM_001163544,NM_001163545,NM_080550	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,-,-,-,-,-,-	SYNRG,DUSP14,SYNRG,SYNRG,SYNRG,SYNRG,SYNRG,SYNRG	-237,-119823,-237,-237,-237,-237,-237,-237
chr2:169938520-169939871	chr2	+	169938534	169939822	True	NM_001142271,NM_001142270,NM_003742	chr2,chr2,chr2	+,+,-	DHRS9,DHRS9,ABCB11	-969,-9501,-50701
chr19:21209286-21209927	chr19	+	21209288	21209971	True	NM_001172671,NM_025189,NM_021269	chr19,chr19,chr19	+,+,-	ZNF430,ZNF430,ZNF708	-5921,-5921,302291
chr22:51001841-51002056	chr22	+	51001863	51002039	True	NM_001123225,NM_138433	chr22,chr22	-,+	C22orf41,KLHDC7B	-535,-15452
chr18:32621310-32621589	chr18	+	32621532	32621604	True	NM_001112734,NM_014268,NR_026570	chr18,chr18,chr18	-,+,+	ZSCAN30,MAPRE2,MAPRE2	248642,-261,-261
chr17:57299916-57301908	chr17	+	57300158	57301642	True	NM_182569,NM_182620,NM_001165994,NM_001165993	chr17,chr17,chr17,chr17	+,-,+,+	GDPD1,SKA2,GDPD1,GDPD1	-2381,-67358,-2381,-2381
chr2:47141826-47142413	chr2	+	47141899	47142369	True	NM_139279,NM_001171509,NM_020458,NM_001171507,NM_001171510,NM_001171506	chr2,chr2,chr2,chr2,chr2,chr2	-,-,+,-,-,-	MCFD2,MCFD2,TTC7A,MCFD2,MCFD2,MCFD2	688,688,25943,932,932,688
chr19:47737235-47737584	chr19	+	47737234	47737432	True	NM_001127241,NM_001127240,NM_001127242,NR_036159,NR_036158,NM_014417	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,+,-	BBC3,BBC3,BBC3,MIR3191,MIR3190,BBC3	-1211,-1211,-1211,-6958,-7086,-2783
chr4:113076044-113076457	chr4	+	113076215	113076433	True	NM_152400,NM_052864	chr4,chr4	+,-	C4orf32,TIFA	-9722,130686
chr11:108187507-108189222	chr11	+	108187680	108188768	True	NM_000051,NM_002519	chr11,chr11	+,-	ATM,NPAT	-94172,-94315
chr13:114567154-114568052	chr13	+	114567229	114567946	True	NM_000820,NR_024609	chr13,chr13	-,+	GAS6,FLJ44054	-183,18663
chr10:15864699-15865441	chr10	+	15864776	15865485	True	NM_024948,NM_001001484	chr10,chr10	-,+	FAM188A,PTER	37095,613481
chr8:40754406-40754664	chr8	+	40754430	40754655	True	NM_001174124,NM_024645,NM_001135731	chr8,chr8,chr8	+,-,-	GOLGA7,ZMAT4,ZMAT4	593425,738,738
chr1:118730277-118730908	chr1	+	118730277	118730666	True	NM_006784,NM_206996	chr1,chr1	+,-	WDR3,SPAG17	-257956,-2429
chr1:47014478-47014735	chr1	+	47014480	47014542	True	NM_001097611,NM_172225	chr1,chr1	-,+	KNCN,DMBX1	2395,-41863
chr17:36980793-36981146	chr17	+	36981006	36981128	True	NM_017748,NM_006148	chr17,chr17	-,+	CWC25,LASP1	511,44983
chr17:1961830-1962085	chr17	+	1961862	1962124	True	NM_006497,NM_001098202,NR_029674,NR_029625	chr17,chr17,chr17,chr17	+,+,-,-	HIC1,HIC1,MIR132,MIR212	-3520,-2309,-8560,-8188
chr20:55967223-55967628	chr20	+	55967290	55967504	True	NM_183425,NM_001190472,NM_017495	chr20,chr20,chr20	+,-,+	RBM38,MTRNR2L3,RBM38	-885,-32412,-885
chr4:9646048-9646547	chr4	+	9646208	9646273	True	NR_031688,NM_000798	chr4,chr4	-,+	MIR548I2,DRD5	-88271,136984
chr15:81489073-81489314	chr15	+	81489137	81489353	True	NM_001172128,NM_181900	chr15,chr15	+,-	IL16,STARD5	-9,127221
chr14:103012348-103012650	chr14	+	103012458	103012664	True	NM_152326,NR_036192	chr14,chr14	-,+	ANKRD9,MIR4309	-36330,-6528
chr3:72895660-72897416	chr3	+	72895935	72897288	True	NM_001080393,NM_018130	chr3,chr3	+,-	GXYLT2,SHQ1	40096,360
chr1:53168722-53169179	chr1	+	53168757	53169159	True	NM_024646,NM_023077	chr1,chr1	+,-	ZYG11B,SELRC1	22971,-4719
chr13:113862445-113862696	chr13	+	113862502	113862702	True	NM_001127203,NM_001127202,NM_003589,NM_001008895,NM_018386	chr13,chr13,chr13,chr13,chr13	-,-,+,+,-	PCID2,PCID2,CUL4A,CUL4A,PCID2	377,377,383,1228,377
chr3:149462927-149464278	chr3	+	149462927	149464178	True	NM_007282,NM_016094	chr3,chr3	+,-	RNF13,COMMD2	66296,6165
chr2:55459329-55459712	chr2	+	55459332	55459735	True	NM_152385,NM_002954,NM_001135592,NM_001177413,NM_001135598	chr2,chr2,chr2,chr2,chr2	-,+,+,+,-	C2orf63,RPS27A,RPS27A,RPS27A,C2orf63	5,45,-344,78,14
chr14:69949818-69950562	chr14	+	69949873	69950449	True	NM_004450,NM_001161498	chr14,chr14	-,+	ERH,UPF0639	-84852,1021
chr4:69206931-69207904	chr4_ctg9_hap1	+	37039	37829	False	NM_014058,NM_133370,NM_001031732	chr4_ctg9_hap1,chr4_ctg9_hap1,chr4_ctg9_hap1	+,-,-	TMPRSS11E,YTHDC1,YTHDC1	105259,7967,7967
chr4:69206931-69207904	chr4	+	69207117	69207907	True	NM_014058,NM_133370,NM_001031732	chr4,chr4,chr4	+,-,-	TMPRSS11E,YTHDC1,YTHDC1	105259,7967,7967
chr12:52868126-52869039	chr12	+	52868275	52869021	True	NM_173086,NM_002284	chr12,chr12	-,+	KRT6C,KRT86	-706,-172686
chr13:19878787-19879681	chr13	+	19878839	19879437	True	NR_034026,NR_027248	chr13,chr13	+,-	LOC100287114,ANKRD26P3	39751,39726
chr7:74588461-74588930	chr7	+	74588879	74588951	True	NM_001003795,NR_003187	chr7,chr7	+,-	GTF2IRD2B,NCF1C	-80583,-1063
chr7:74588461-74588930	chr7	-	72633478	72633550	False	NR_002164,NR_003186	chr7,chr7	-,+	GTF2IRD2P1,NCF1B	52158,1123
chr7:74588461-74588930	chr7	-	74187179	74187251	False	NM_173537,NM_000265	chr7,chr7	-,+	GTF2IRD2,NCF1	80640,1057
chr7:117512596-117512941	chr7	+	117512612	117512840	True	NM_033427,NM_016200	chr7,chr7	-,+	CTTNBP2,NAA38	771,311245
chr1:957942-958624	chr1	+	957944	958642	True	NM_005101,NM_001142467,NM_198576	chr1,chr1,chr1	+,-,+	ISG15,HES4,AGRN	-9148,-22392,-2492
chr5:150074747-150076183	chr5	+	150075067	150076116	True	NM_018047,NM_133371	chr5,chr5	-,+	RBM22,MYOZ3	4603,-34724
chr7:128310452-128311252	chr7	+	128310659	128311062	True	NM_001708,NM_001012454,NM_001128926	chr7,chr7,chr7	-,+,+	OPN1SW,FAM71F2,FAM71F2	104833,1283,1283
chr11:109293948-109294415	chr11	+	109294003	109294431	True	NM_015065,NM_207645	chr11,chr11	-,+	EXPH5,C11orf87	-829629,-1208
chr19:43025664-43026219	chr19	+	43025745	43026157	True	NM_001410,NM_001184816,NM_001184815,NM_001184813,NM_001024912,NM_001712	chr19,chr19,chr19,chr19,chr19,chr19	+,-,-,-,-,-	MEGF8,CEACAM1,CEACAM1,CEACAM1,CEACAM1,CEACAM1	-196035,6554,6554,6554,6554,6554
chr5:180579852-180580057	chr5	+	180579865	180580103	True	NM_203297,NM_206880	chr5,chr5	-,+	TRIM7,OR2V2	47877,1839
chr12:123240098-123241278	chr12	+	123240254	123241251	True	NM_032554,NM_003677	chr12,chr12	-,+	GPR81,DENR	-25125,-2934
chr8:6837403-6837670	chr8	+	6837456	6837630	True	NM_001042500,NM_018361,NM_004084,NR_036687,NR_036686	chr8,chr8,chr8,chr8,chr8	-,+,-,-,-	DEFA1B,AGPAT5,DEFA1,DEFT1P2,DEFT1P	34,-271630,34,9663,9663
chr8:6837403-6837670	chr8	+	6856566	6856740	False	NM_001042500,NM_004084,NM_001164452,NR_036687,NR_036686	chr8,chr8,chr8,chr8,chr8	-,-,+,-,-	DEFA1B,DEFA1,FAM90A14,DEFT1P2,DEFT1P	34,34,257685,-9323,-9323
chr8:6837403-6837670	chr8	+	6875707	6875839	False	NM_005217,NR_036686,NR_036687,NM_001164452,NM_001042500,NM_004084	chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,+,-,-	DEFA3,DEFT1P,DEFT1P2,FAM90A14,DEFA1B,DEFA1	27,-9361,-9361,238586,34,34
chr3:197461160-197462754	chr3	+	197461403	197462455	True	NM_001011537,NM_014687	chr3,chr3	+,-	FYTTD1,KIAA0226	13968,1368
chr10:7828955-7829304	chr10	+	7828967	7829247	True	NM_005174,NM_012311,NM_001001973	chr10,chr10,chr10	+,-,+	ATP5C1,KIN,ATP5C1	845,747,845
chr1:149911465-149911683	chr1	+	149911479	149911567	True	NM_181873,NM_016074,NM_001145862	chr1,chr1,chr1	-,+,-	MTMR11,BOLA1,MTMR11	-3213,-40375,-2688
chr15:77287796-77288655	chr15	+	77288044	77288602	True	NM_003978,NM_001168412	chr15,chr15	+,-	PSTPIP1,TSPAN3	-637,75024
chr2:131101234-131101755	chr2	+	131101326	131101592	True	NM_033416,NM_032357	chr2,chr2	+,-	IMP4,CCDC115	-888,-1404
chr6:125289015-125289347	chr6	+	125289250	125289382	True	NR_026876,NM_152553	chr6,chr6	-,+	STL,RNF217	-5077,15131
chr9:19381646-19382937	chr9	+	19381645	19382759	True	NM_001010,NM_001010887	chr9,chr9	-,+	RPS6,ACER2	-1410,26165
chr21:44783966-44784274	chr21	+	44784234	44784296	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	85607,62756
chrX:118894007-118894277	chrX	+	118894063	118894273	True	NM_001105576,NR_002584	chrX,chrX	+,-	ANKRD58,SNORA69	-1538,27224
chr16:31894854-31896498	chr16	+	31895112	31896526	True	NR_002827,NM_003414	chr16,chr16	-,+	HERC2P4,ZNF267	267398,-10084
chr15:23890548-23890788	chr15	+	23890605	23890767	True	NM_005664,NM_019066	chr15,chr15	+,-	MKRN3,MAGEL2	-80202,2276
chrX:69276267-69277822	chrX	+	69276335	69277723	True	NM_001002254,NM_207320	chrX,chrX	-,+	AWAT2,OTUD6A	-6547,4617
chr19:44103394-44104772	chr19	+	44103527	44104722	True	NM_001007561,NM_001145347,NM_024327	chr19,chr19,chr19	-,+,+	IRGQ,ZNF576,ZNF576	-3240,-2847,-3041
chr8:91658347-91658564	chr8	+	91658398	91658518	True	NM_001008495,NM_001146273,NM_022351	chr8,chr8,chr8	-,-,+	TMEM64,TMEM64,NECAB1	-265,-265,145402
chr7:101464034-101464664	chr7	+	101464035	101464484	True	NM_181552,NM_138403,NM_001913,NM_001202543,NM_001202546,NM_001202544,NM_001202545,NM_181500	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,-,+,+,+,+,+,+	CUX1,MYL10,CUX1,CUX1,CUX1,CUX1,CUX1,CUX1	-3212,-191459,-4910,-4910,-4806,-4910,-4910,-4910
chr16:12010491-12010696	chr16	+	12010545	12010741	True	NM_001192,NM_002094,NM_001130007,NM_001130006	chr16,chr16,chr16,chr16	+,-,-,-	TNFRSF17,GSPT1,GSPT1,GSPT1	48222,-720,-26,-720
chr19:12851382-12851655	chr19	+	12851441	12851699	True	NM_024038,NM_004317	chr19,chr19	-,+	C19orf43,ASNA1	-5912,-3186
chr16:2096059-2096688	chr16	+	2096279	2096679	True	NM_002528,NM_001077183,NM_001114382,NM_000548	chr16,chr16,chr16,chr16	-,+,+,+	NTHL1,TSC2,TSC2,TSC2	1238,1310,1310,1310
chr19:30158041-30158274	chr19	+	30158172	30158258	True	NM_001031726,NM_024310	chr19,chr19	-,+	C19orf12,PLEKHF1	47755,-1896
chr12:106692641-106694153	chr12	+	106693088	106694057	True	NM_006825,NM_152772	chr12,chr12	-,+	CKAP4,TCP11L2	-51375,2523
chr19:4068548-4068748	chr19	+	4068553	4068647	True	NM_015897,NM_015898	chr19,chr19	+,-	PIAS4,ZBTB7A	-60855,-1737
chr12:27410471-27410885	chr12	+	27410494	27410702	True	NM_001080406,NM_015000	chr12,chr12	-,+	C12orf71,STK38L	-175039,-13478
chr2:232329154-232329450	chr2	+	232329158	232329496	True	NR_002921,NM_005381,NR_004398,NM_145236,NR_002908	chr2,chr2,chr2,chr2,chr2	-,-,-,+,-	SNORA75,NCL,SNORD82,B3GNT7,SNORD20	-8511,11,-4005,-68874,-7924
chr1:1933058-1934971	chr1	+	1933215	1934860	True	NM_000815,NM_001080484	chr1,chr1	+,-	GABRD,KIAA1751	15907,466
chr2:136633140-136633404	chr2	+	136633249	136633449	True	NM_014607,NM_005915	chr2,chr2	+,-	UBXN4,MCM6	-134111,612
chr7:105753108-105753473	chr7	+	105753194	105753504	True	NM_152750,NM_006754,NM_182715	chr7,chr7,chr7	+,-,-	CDHR3,SYPL1,SYPL1	-149588,-137,-436
chr3:70172718-70173159	chr3	+	70172772	70173172	True	NM_198178,NM_015123	chr3,chr3	+,-	MITF,FRMD4B	-187072,-737342
chr9:39721842-39723696	chr9	+	39722042	39723449	True	NR_003528,NM_001085452	chr9,chr9	-,+	LOC653501,FAM75A1	-257516,161525
chr9:39721842-39723696	chr9	-	43800975	43801025	False	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	-170245,-116141
chr9:39721842-39723696	chr9	+	39192740	39194147	False	NM_033655,NM_001085452	chr9,chr9	-,+	CNTNAP3,FAM75A1	94206,161551
chr9:39721842-39723696	chr9	+	40518819	40519774	False	NM_001083124,NM_033160	chr9,chr9	+,-	FAM75A3,ZNF658	180516,272620
chr13:82262458-82262811	chr13	+	82262675	82262849	True	NM_019080,NM_005842	chr13,chr13	+,-	NDFIP2,SPRY2	-2207481,-1347589
chr2:106370117-106371962	chr2	+	106370210	106371954	True	NM_003581,NM_001004722,NM_201557	chr2,chr2,chr2	+,+,-	NCK2,NCK2,FHL2	-8742,-8742,-314980
chr17:27276315-27276627	chr17	+	27276528	27276610	True	NM_020889,NM_016518,NM_001033561	chr17,chr17,chr17	-,+,-	PHF12,PIPOX,PHF12	1948,93307,1948
chr2:135479243-135480369	chr2	+	135479278	135480393	True	NM_138326,NM_030923	chr2,chr2	+,-	ACMSD,TMEM163	115792,-2707
chr19:33851600-33852271	chr19	+	33851779	33852247	True	NM_001806,NM_004364	chr19,chr19	+,-	CEBPG,CEBPA	12361,-58349
chr9:117092994-117093730	chr9	+	117092997	117093500	True	NM_000607,NM_000608,NM_030767	chr9,chr9,chr9	+,+,-	ORM1,ORM2,AKNA	-7745,-979,63236
chr9:117092994-117093730	chr9	+	117086674	117086725	False	NM_000607,NM_000608,NM_030767	chr9,chr9,chr9	+,+,-	ORM1,ORM2,AKNA	-1423,5343,70011
chr4:169423704-169424027	chr4	+	169423704	169423946	True	NM_001012967,NM_001166108,NM_016081	chr4,chr4,chr4	-,+,+	DDX60L,PALLD,PALLD	-22066,-5543,-5543
chr1:196577602-196577904	chr1	+	196577658	196577895	True	NM_198503,NM_001014975	chr1,chr1	-,+	KCNT2,CFH	-159,43112
chr16:701100-701453	chr16	+	701193	701439	True	NM_138418,NM_032366,NM_145294	chr16,chr16,chr16	+,-,+	FAM195A,C16orf13,WDR90	-9395,-14846,-1881
chr7:150746378-150746740	chr7	+	150746382	150746540	True	NM_004769,NM_001164410,NM_020321,NM_020322,NM_001199692,NM_004935	chr7,chr7,chr7,chr7,chr7,chr7	+,-,+,+,+,-	ACCN3,CDK5,ACCN3,ACCN3,SLC4A2,CDK5	-828,8562,-828,-828,8758,8562
chr7:155324689-155325038	chr7	+	155324688	155325006	True	NM_001103176,NM_001427	chr7,chr7	-,+	CNPY1,EN2	1583,-73915
chr19:58738332-58738770	chr19	+	58738513	58738775	True	NM_014480,NM_024620	chr19,chr19	+,-	ZNF544,ZNF329	1294,-76365
chr6:17606590-17607211	chr6	+	17606750	17607102	True	NM_005124,NM_016255	chr6,chr6	-,+	NUP153,FAM8A1	99766,-6296
chr4:106508910-106509287	chr4	+	106509008	106509308	True	NM_176869,NM_017700	chr4,chr4	-,+	PPA2,ARHGEF38	-113781,-35282
chr4:55095146-55096195	chr4	+	55095254	55096032	True	NM_012110,NM_006206	chr4,chr4	-,+	CHIC2,PDGFRA	-164466,-41
chrX:38080754-38082468	chrX	+	38081170	38082343	True	NM_006307,NM_000531,NM_001170752,NM_001170751,NM_001170750	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	SRPX,OTC,SRPX,SRPX,SRPX	-993,129392,-993,-993,-993
chr16:3766913-3767303	chr16	+	3766916	3767302	True	NM_005223,NM_016292	chr16,chr16	+,-	DNASE1,TRAP1	-64027,346
chr22:39856433-39857045	chr22	+	39856837	39856991	True	NM_002409,NM_194326	chr22,chr22	+,-	MGAT3,RPS19BP1	-3565,71919
chr14:36294595-36295440	chr14	+	36294897	36295485	True	NM_194301,NM_032352	chr14,chr14	-,+	RALGAPA1,BRMS1L	-16465,111
chr16:81350755-81351171	chr16	+	81350773	81351161	True	NM_001076780,NM_022041	chr16,chr16	-,+	PKD1L2,GAN	-96798,-2265
chr21:39660121-39660841	chr21	+	39660278	39660790	True	NM_005867,NM_170737	chr21,chr21	-,+	DSCR4,KCNJ15	-166824,-15914
chr19:55571940-55572879	chr19	+	55572207	55572895	True	NR_027382,NM_001145971,NR_027381,NM_138412,NM_133180	chr19,chr19,chr19,chr19,chr19	-,-,-,-,+	RDH13,RDH13,RDH13,RDH13,EPS8L1	1740,1740,1740,8069,14325
chr4:166155857-166156443	chr4	+	166155911	166156232	True	NM_001161522,NR_026575	chr4,chr4	+,-	KLHL2,GK3P	-24802,45008
chr4:15484064-15485309	chr4	+	15484459	15485355	True	NM_001193534,NM_001080522	chr4,chr4	-,+	FBXL5,CC2D2A	171730,-13021
chr7:148821926-148822431	chr7	+	148821927	148822449	True	NM_001001661,NM_020781	chr7,chr7	-,+	ZNF425,ZNF398	1045,1058
chr1:101348089-101348548	chr1	+	101348441	101348551	True	NM_001144884,NM_001033025	chr1,chr1	+,-	SLC30A7,EXTL2	13080,11917
chr3:169691305-169692788	chr3	+	169691589	169692673	True	NM_003262,NR_027622,NR_024409	chr3,chr3,chr3	+,-,-	SEC62,LOC100128164,LOC100128164	-7060,-7067,-7067
chr19:2722879-2723187	chr19	+	2722916	2723172	True	NM_145173,NM_003249	chr19,chr19	-,+	DIRAS1,THOP1	-1526,62333
chrX:69500051-69502012	chrX	+	69500362	69502012	True	NM_012310,NM_016484,NM_001032726	chrX,chrX,chrX	+,-,+	KIF4A,PDZD11,RAB41	7866,7836,9
chr17:38936955-38938750	chr17	+	38937217	38938773	True	NM_181539,NM_181537,NM_001195387	chr17,chr17,chr17	-,-,+	KRT26,KRT27,TMEM99	-8806,63,36570
chr16:30549308-30549677	chr16	+	30549307	30549572	True	NM_023931,NM_002209	chr16,chr16	-,+	ZNF747,ITGAL	-3113,-65375
chrX:118827183-118827567	chrX	+	118827307	118827573	True	NM_145802,NM_145799,NM_145800,NM_001105576,NM_015129	chrX,chrX,chrX,chrX,chrX	-,-,-,+,-	SEPT6,SEPT6,SEPT6,ANKRD58,SEPT6	20,20,20,65002,20
chr2:219723709-219724352	chr2	+	219723733	219724171	True	NM_017431,NM_006522	chr2,chr2	-,+	PRKAG3,WNT6	-27221,374
chr22:18043642-18044882	chr22	+	18043717	18044784	True	NM_031481,NM_001039366	chr22,chr22	+,-	SLC25A18,ATP6V1E1	-585,66855
chr19:16769895-16770422	chr19	+	16770121	16770467	True	NM_024104,NM_024074	chr19,chr19	-,+	C19orf42,TMEM38A	551,1470
chr20:813768-814016	chr20	+	813768	814058	True	NM_033409,NM_207121,NM_001042353	chr20,chr20,chr20	-,+,+	C20orf54,FAM110A,FAM110A	-64540,2652,297
chr6:146348103-146348888	chr6	+	146348144	146348845	True	NM_001114329,NM_173082,NM_000838	chr6,chr6,chr6	+,-,+	GRM1,SHPRH,GRM1	-64,-62911,-64
chr3:8987447-8988958	chr3	+	8987896	8988980	True	NM_020165,NM_001234	chr3,chr3	-,+	RAD18,CAV3	16239,-212461
chr9:111697966-111699162	chr9	+	111698011	111698951	True	NM_003640,NM_017832	chr9,chr9	-,+	IKBKAP,C9orf6	-1403,-1390
chr9:84529963-84530994	chr9	+	84530083	84531039	True	NM_005077,NR_026851	chr9,chr9	-,+	TLE1,FAM75D5	-226487,-1782
chr7:150075646-150075979	chr7	+	150075763	150075936	True	NM_002889,NM_173680,NM_013400,NM_014374,NM_001099695,NM_001099696	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,+,+	RARRES2,ZNF775,REPIN1,REPIN1,REPIN1,REPIN1	-37000,469,-9935,-7556,-9935,-9935
chr1:220106257-220107350	chr1	+	220106429	220106993	True	NM_018060,NM_018713	chr1,chr1	+,-	IARS2,SLC30A10	160461,-4436
chr19:11691504-11692315	chr19	+	11691768	11692251	True	NM_001611,NM_145295,NM_001111036,NM_001111035,NM_001111034	chr19,chr19,chr19,chr19,chr19	-,+,-,-,-	ACP5,ZNF627,ACP5,ACP5,ACP5	-3215,15983,-1967,-1967,-2176
chr17:79816070-79816395	chr17	+	79816246	79816438	True	NM_000918,NM_001002244	chr17,chr17	-,+	P4HB,ANAPC11	2156,33160
chr2:38894784-38895080	chr2	+	38894981	38895051	True	NM_138801,NM_138394	chr2,chr2	+,-	GALM,HNRPLL	-1985,-64803
chr21:46787829-46788085	chr21	+	46787864	46788110	True	NM_130445,NR_028082	chr21,chr21	+,-	COL18A1,NCRNA00175	36986,56895
chr1:205651481-205652656	chr1	+	205651631	205652553	True	NM_033102,NM_181644	chr1,chr1	-,+	SLC45A3,MFSD4	-2001,-113579
chr7:99718002-99718852	chr7	+	99718002	99718577	True	NM_139315,NM_152755,NM_001190415,NR_033792,NM_203397,NM_005641	chr7,chr7,chr7,chr7,chr7,chr7	-,+,-,-,+,-	TAF6,CNPY4,TAF6,TAF6,MBLAC1,TAF6	-981,-788,-521,-1007,5742,-1007
chr7:16683519-16684028	chr7	+	16683662	16684002	True	NM_020319,NM_014038,NM_001159767,NR_027624	chr7,chr7,chr7,chr7	-,+,+,+	ANKMY2,BZW2,BZW2,BZW2	1490,1756,1756,1756
chr2:153558251-153558658	chr2	+	153558303	153558657	True	NM_152522,NM_017892	chr2,chr2	+,-	ARL6IP6,PRPF40A	15765,15368
chr22:47023921-47024249	chr22	+	47023960	47024286	True	NM_015124,NM_014246	chr22,chr22	+,-	GRAMD4,CELSR1	-1353,-90893
chr10:6326232-6328031	chr10	+	6326593	6327678	True	NM_004566,NM_000417	chr10,chr10	+,-	PFKFB3,IL2RA	-81811,-222260
chr22:41470739-41471184	chr22	+	41470788	41471232	True	NM_138481,NR_031694	chr22,chr22	-,+	CHADL,MIR1281	165753,17284
chr5:178158722-178160281	chr5	+	178158954	178160278	True	NM_005649,NM_058230	chr5,chr5	-,+	ZNF354A,ZNF354B	-1251,126675
chr2:10827886-10829768	chr2	+	10828122	10829496	True	NM_001039362,NM_024894	chr2,chr2	+,-	ATP6V1C2,NOL10	32278,666
chr1:211529800-211531672	chr1	+	211530009	211531512	True	NM_001164688,NM_145759	chr1,chr1	-,+	RD3,TRAF5	134810,-10354
chr1:14087933-14089272	chr1	+	14088147	14089177	True	NM_001007257,NM_001010847	chr1,chr1	+,-	PRDM2,LRRC38	-12322,-247905
chr9:95527665-95528274	chr9	+	95527903	95528295	True	NR_026868,NM_015250,NM_001003800	chr9,chr9,chr9	+,-,-	ANKRD19,BICD2,BICD2	43597,-820,-820
chr22:22858708-22859684	chr22	+	22858827	22859512	True	NR_027426,NM_080764	chr22,chr22	+,-	LOC648691,ZNF280B	42243,4043
chr8:143867570-143868398	chr8	+	143867655	143868287	True	NM_177477,NM_177476,NM_177457,NM_002066,NM_003695,NM_023946	chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,+,-,-	LYNX1,LYNX1,LYNX1,GML,LY6D,LYNX1	-8911,-9218,-8015,47929,103,-8016
chr17:39551152-39551439	chr17	+	39551293	39551419	True	NM_002277,NM_030975	chr17,chr17	-,+	KRT31,KRTAP9-9	2475,-139708
chr17:39551152-39551439	chr17	+	39535477	39535527	False	NM_030975,NM_021013,NM_002279	chr17,chr17,chr17	+,-,-	KRTAP9-9,KRT34,KRT33B	-123892,3159,-9430
chr16:28300149-28300806	chr16	+	28300262	28300800	True	NM_001024401,NM_015171	chr16,chr16	+,-	SBK1,XPO6	3039,-77072
chr14:90528576-90528799	chr14	+	90528588	90528842	True	NM_022054,NM_145231	chr14,chr14	+,-	KCNK13,EFCAB11	-531,-107499
chr1:182809300-182809525	chr1	+	182809354	182809439	True	NM_030933,NM_001357,NR_033302	chr1,chr1,chr1	-,+,+	SHCBP1L,DHX9,DHX9	113169,-967,-967
chr19:46105515-46106197	chr19	+	46105581	46106013	True	NM_005282,NM_000164	chr19,chr19	-,+	GPR4,GIPR	-115,65488
chr9:137032672-137033147	chr9	+	137032821	137033075	True	NR_023344,NM_052821	chr9,chr9	-,+	RNU6ATAC,WDR5	-3135,-27971
chr3:35681003-35681297	chr3	+	35681016	35681324	True	NM_033403,NM_016300	chr3,chr3	-,+	DCLK3,ARPP21	1100078,2524
chr4:3768342-3768569	chr4	+	3768493	3768599	True	NM_000683,NR_034136	chr4,chr4	+,-	ADRA2C,LOC100133461	-248,-88911
chr14:92335489-92336149	chr14	+	92335499	92336134	True	NM_001128596,NM_017437	chr14,chr14	-,+	TC2N,CPSF2	-1619,252163
chr1:6454518-6454812	chr1	+	6454518	6454642	True	NM_007274,NM_181864,NM_031475	chr1,chr1,chr1	-,-,+	ACOT7,ACOT7,ESPN	-692,-8635,30205
chr11:43965019-43965531	chr11	+	43965142	43965466	True	NM_021926,NM_001145033	chr11,chr11	-,+	ALX4,C11orf96	366300,-1087
chr8:124749394-124749655	chr8	+	124749416	124749654	True	NM_144963,NM_004306,NM_001003954	chr8,chr8,chr8	+,-,-	FAM91A1,ANXA13,ANXA13	31227,47,47
chr3:189837094-189838209	chr3	+	189837247	189838109	True	NM_001134418,NM_006580,NM_018192	chr3,chr3,chr3	-,+,-	LEPREL1,CLDN16,LEPREL1	2167,267551,849
chr2:85361632-85361976	chr2	+	85361660	85361998	True	NM_006464,NM_031283	chr2,chr2	-,+	TGOLN2,TCF7L1	193426,-1128
chr4:176987575-176989498	chr4	+	176987606	176989444	True	NM_170710,NM_201592,NM_181265	chr4,chr4,chr4	+,-,+	WDR17,GPM6A,WDR17	-674,-63958,-674
chr1:223191451-223192065	chr1	+	223191477	223191993	True	NM_032890,NM_003268	chr1,chr1	+,-	DISP1,TLR5	-203097,124681
chr19:15311217-15311468	chr19	+	15311345	15311419	True	NM_033025,NM_000435	chr19,chr19	+,-	SYDE1,NOTCH3	-93182,423
chr19:6395347-6395938	chr19	+	6395847	6395929	True	NM_002096,NM_032306	chr19,chr19	-,+	GTF2F1,ALKBH7	-2556,-23454
chr1:154473041-154474106	chr1	+	154473100	154473946	True	NM_001010846,NM_182499,NM_001098475	chr1,chr1,chr1	-,+,+	SHE,TDRD10,TDRD10	630,748,748
chr7:138089130-138089348	chr7	+	138089299	138089383	True	NM_174959,NM_003852	chr7,chr7	-,+	SVOPL,TRIM24	259636,55695
chr7:75621882-75622211	chr7	+	75621963	75622035	True	NM_031925,NR_002955	chr7,chr7	-,+	TMEM120A,SNORA14A	2007,-48913
chr4:107958150-107958407	chr4	+	107958218	107958317	True	NM_014421,NM_001142416	chr4,chr4	-,+	DKK2,AIMP1	-765,-720605
chr2:240118234-240118617	chr2	+	240118233	240118615	True	NR_036229,NR_026664	chr2,chr2	+,-	MIR4269,MGC16025	108541,-1080
chr9:112542684-112543283	chr9	+	112542778	112543300	True	NM_053016,NM_007203,NM_002829,NM_147150	chr9,chr9,chr9,chr9	+,+,-,+	PALM2,PALM2-AKAP2,PTPN3,PALM2-AKAP2	-252,-252,-282185,-252
chr12:83545417-83545902	chr12	+	83545434	83545874	True	NM_152588,NR_033192	chr12,chr12	+,-	TMTC2,CCDC59	-464558,-792850
chr1:1141259-1141553	chr1	+	1141258	1141502	True	NM_003327,NM_148901,NM_153254,NM_148902,NM_004195,NM_080605	chr1,chr1,chr1,chr1,chr1,chr1	-,-,+,-,-,+	TNFRSF4,TNFRSF18,TTLL10,TNFRSF18,TNFRSF18,B3GALT6	8096,637,-26232,637,637,26126
chr20:45986027-45986339	chr20	+	45986177	45986329	True	NM_183048,NR_024594,NM_012408,NM_183047	chr20,chr20,chr20,chr20	-,+,-,-	ZMYND8,LOC100131496,ZMYND8,ZMYND8	-703,-38982,-703,-703
chr14:96131168-96132212	chr14	+	96131249	96132059	True	NM_001098725,NR_028288	chr14,chr14	-,+	TCL1A,TCL6	48524,-13785
chr14:51027548-51028853	chr14	+	51027744	51028655	True	NM_181598,NM_015915,NM_198794	chr14,chr14,chr14	+,+,-	ATL1,ATL1,MAP4K5	-1052,-1052,-28368
chr12:2901926-2902448	chr12	+	2901993	2902411	True	NM_002014,NR_033958	chr12,chr12	+,-	FKBP4,LOC283440	1696,-21158
chr6:139453530-139454653	chr6	+	139453615	139454549	True	NM_016217,NM_031922	chr6,chr6	+,-	HECA,REPS1	1699,-144217
chr5:158887122-158888351	chr5	+	158887291	158888374	True	NR_037889,NR_027110	chr5,chr5	+,-	LOC285626,LOC285627	-128816,4968
chr16:68876960-68877357	chr16	+	68877147	68877353	True	NM_001040146,NM_024562	chr16,chr16	-,+	CHTF8,TMCO7	288759,155
chr3:155413525-155415139	chr3	+	155413584	155415118	True	NM_003875,NM_014996	chr3,chr3	+,-	GMPS,PLCH1	173206,6929
chr8:22297875-22298117	chr8	+	22297977	22298147	True	NM_005605,NR_029714	chr8,chr8	+,-	PPP3CC,MIR320A	448,-195421
chr1:167525738-167526790	chr1	+	167525777	167526796	True	NM_003851,NM_052862	chr1,chr1	-,+	CREG1,RCSD1	-2721,72677
chr6:25728174-25728760	chr6	+	25728325	25728699	True	NM_170745,NM_170610	chr6,chr6	-,+	HIST1H2AA,HIST1H2BA	-1535,-1248
chr14:77876420-77877735	chr14	+	77876497	77877345	True	NM_001010860,NM_138791	chr14,chr14	+,-	SAMD15,C14orf148	-32786,11946
chr15:35259388-35260105	chr15	+	35259396	35259992	True	NR_003144,NM_014691	chr15,chr15	+,-	LOC723972,AQR	269534,2059
chr3:186265554-186266931	chr3	+	186265857	186266718	True	NM_016306,NM_017541	chr3,chr3	+,-	DNAJB11,CRYGS	21748,-3690
chr7:20897642-20899016	chr7	+	20897985	20899061	True	NM_198956,NR_026673	chr7,chr7	-,+	SP8,RPL23P8	-71477,-31133
chr8:54791149-54791765	chr8	+	54791241	54791803	True	NM_003702,NM_213619	chr8,chr8	+,-	RGS20,ATP6V1H	1638,-35391
chr14:103018724-103019084	chr14	+	103018727	103018821	True	NM_152326,NR_036192	chr14,chr14	-,+	ANKRD9,MIR4309	-42599,-12797
chr7:65968844-65969270	chr7	+	65969016	65969116	True	NM_001167961,NR_002933	chr7,chr7	+,-	KCTD7,LOC493754	124751,74432
chr15:31393427-31394290	chr15	+	31393481	31394264	True	NM_014967,NM_002420	chr15,chr15	+,-	FAN1,TRPM1	-197456,-157
chr19:58951527-58951772	chr19	+	58951540	58951716	True	NM_207395,NM_003433	chr19,chr19	+,-	ZNF324B,ZNF132	11254,-13
chr14:102418810-102419943	chr14	+	102418988	102419996	True	NM_001376,NM_005348	chr14,chr14	+,-	DYNC1H1,HSP90AA1	10868,133574
chr13:77601662-77602474	chr13	+	77601684	77602302	True	NM_006493,NM_012158	chr13,chr13	+,-	CLN5,FBXL3	-35676,-353
chr6:166072577-166073664	chr6	+	166072609	166073474	True	NM_001130690,NM_006661,NR_027284	chr6,chr6,chr6	-,-,+	PDE10A,PDE10A,LOC441177	2160,2160,327564
chr12:53645614-53645815	chr12	+	53645614	53645742	True	NM_001170790,NM_032889,NM_000966	chr12,chr12,chr12	+,+,-	MFSD5,MFSD5,RARG	-295,133,-19578
chr19:18305465-18305690	chr19	+	18305508	18305582	True	NM_002866,NM_032683	chr19,chr19	-,+	RAB3A,MPV17L2	9342,-1519
chr6:105312158-105312808	chr6	+	105312294	105312634	True	NM_001004317,NM_020771	chr6,chr6	+,-	LIN28B,HACE1	92288,-4500
chr17:71159128-71160733	chr17	+	71159244	71160666	True	NM_001098832,NM_001050	chr17,chr17	-,+	FAM104A,SSTR2	67917,493
chr7:72687607-72689104	chr7	+	72687661	72689062	True	NM_001135211,NR_002164,NR_003186	chr7,chr7,chr7	+,-,+	FKBP6,GTF2IRD2P1,NCF1B	53092,-2003,-53040
chr7:72687607-72689104	chr7	+	74241578	74242978	False	NM_173537,NM_000265	chr7,chr7	-,+	GTF2IRD2,NCF1	24913,-53322
chr7:72687607-72689104	chr7	-	74533272	74534433	False	NM_030798,NM_001003795	chr7,chr7	-,+	WBSCR16,GTF2IRD2B	-43573,-24976
chr10:79790553-79791007	chr10	+	79790555	79790689	True	NM_001026,NM_007055,NM_001142282,NM_001142283,NM_001142284,NM_033022,NM_001142285	chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,-,+,+,+,+,+	RPS24,POLR3A,RPS24,RPS24,RPS24,RPS24,RPS24	2828,-1257,2828,2828,2828,2828,2828
chr22:25361304-25361562	chr22	+	25361387	25361447	True	NM_001145206,NM_001001663	chr22,chr22	+,-	KIAA1671,TMEM211	62493,-26073
chr19:7541639-7542004	chr19	+	7541749	7541819	True	NR_024491,NM_198534	chr19,chr19	-,+	LOC100128573,C19orf45	-3502,20625
chr12:50791940-50792435	chr12	+	50792221	50792298	True	NR_033200,NM_052879,NM_001145475,NM_199190,NM_001170804,NM_001170803,NM_199188,NM_001170808	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,-,+,+,+,+,+	LARP4,LARP4,FAM186A,LARP4,LARP4,LARP4,LARP4,LARP4	2293,2293,-1816,2293,2293,2293,2293,2293
chr17:58588667-58589554	chr17	+	58588998	58589447	True	NM_006380,NM_003620	chr17,chr17	-,+	APPBP2,PPM1D	14189,88096
chr18:623500-624518	chr18	+	623761	624563	True	NM_199167,NM_001012716	chr18,chr18	+,-	CLUL1,C18orf56	-7112,33827
chr16:89726341-89727142	chr16	+	89726437	89727091	True	NM_002768,NM_001083314,NM_153025	chr16,chr16,chr16	-,-,+	CHMP1A,CHMP1A,C16orf55	-2308,-2308,-2284
chr3:186080357-186081059	chr3	+	186080407	186081046	True	NM_016306,NM_001080744,NM_001080745,NM_001346	chr3,chr3,chr3,chr3	+,-,-,-	DNAJB11,DGKG,DGKG,DGKG	207420,-384,-384,-384
chr3:196697017-196697306	chr3	+	196697046	196697352	True	NR_024388,NM_025163	chr3,chr3	+,-	LOC152217,PIGZ	-27610,-1342
chr2:85806235-85806580	chr2	+	85806242	85806623	True	NM_003761,NM_001142269,NM_006634	chr2,chr2,chr2	+,-,+	VAMP8,GGCX,VAMP5	-1679,-17585,4907
chr16:67282449-67282696	chr16	+	67282473	67282739	True	NM_013241,NM_004594	chr16,chr16	-,+	FHOD1,SLC9A5	-1048,115
chr10:95754152-95755972	chr10	+	95754299	95755965	True	NR_002319,NM_016341	chr10,chr10	-,+	PIPSL,PLCE1	-32627,-607
chr3:33320853-33321989	chr3	+	33321088	33321789	True	NM_012157,NM_015551,NM_001171713	chr3,chr3,chr3	+,-,+	FBXL2,SUSD5,FBXL2	-2213,-60381,-2210
chr18:29077044-29077636	chr18	+	29077044	29077662	True	NM_004775,NM_001943	chr18,chr18	-,+	B4GALT6,DSG2	187074,364
chrX:73072639-73074054	chrX	+	73072726	73073993	True	NR_001564,NR_003255	chrX,chrX	-,+	XIST,TSIX	-138,-60744
chr16:56780208-56780672	chr16	+	56780256	56780628	True	NM_005950,NM_014669	chr16,chr16	-,+	MT1G,NUP93	-78279,-16290
chr6:62862146-62862863	chr6	+	62862265	62862901	True	NM_001190706,NM_152688	chr6,chr6	+,-	MTRNR2L9,KHDRBS2	-578318,133249
chr19:6281638-6282806	chr19	+	6281938	6282395	True	NM_006012,NM_005934	chr19,chr19	+,-	CLPP,MLLT1	79067,-1979
chr13:49585657-49586408	chr13	+	49585656	49586252	True	NM_030925,NM_001079673	chr13,chr13	-,+	CAB39L,FNDC3A	389549,-35665
chr12:100526942-100527528	chr12	+	100527136	100527545	True	NR_031728,NM_015054,NM_001006947	chr12,chr12,chr12	+,-,-	MIR1827,UHRF1BP1L,UHRF1BP1L	56116,9152,9152
chr19:4064681-4064886	chr19	+	4064837	4064909	True	NM_015897,NM_015898	chr19,chr19	+,-	PIAS4,ZBTB7A	-57139,1957
chr8:145193747-145194172	chr8	+	145193804	145194166	True	NM_030974,NM_032450,NM_016458,NM_001099281,NM_001099280	chr8,chr8,chr8,chr8,chr8	-,+,+,+,+	SHARPIN,HEATR7A,FAM203A,HEATR7A,HEATR7A	-34664,8752,-1183,8752,8752
chr8:145193747-145194172	chr8	+	145439012	145439374	False	NM_016458,NM_015201	chr8,chr8	+,-	FAM203A,BOP1	-1183,75796
chr5:131992301-131994183	chr5	+	131992730	131993962	True	NM_007054,NM_002188	chr5,chr5	-,+	KIF3A,IL13	79353,24
chr14:23297356-23298193	chr14	+	23297512	23298040	True	NM_004995,NM_181304,NM_181305,NM_181306,NM_181307,NM_180982,NM_001126106,NM_178336	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,+,+,+,-,+	MMP14,MRPL52,MRPL52,MRPL52,MRPL52,MRPL52,SLC7A7,MRPL52	7752,1051,1051,1051,1051,1051,-8498,1051
chr17:49228123-49228799	chr17	+	49228266	49228561	True	NM_001018136,NM_198175,NM_000269,NR_037149,NM_003971	chr17,chr17,chr17,chr17,chr17	+,+,+,+,-	NME1-NME2,NME1,NME1,NME1-NME2,SPAG9	2335,2358,2358,2335,-30040
chr17:74704262-74705717	chr17	+	74704625	74705553	True	NM_001008528,NM_001008529,NM_001080510,NM_198530	chr17,chr17,chr17,chr17	-,-,+,-	MXRA7,MXRA7,METTL23,MXRA7	1553,1553,17396,1553
chr10:102893669-102893947	chr10	+	102893729	102893937	True	NM_005521,NM_001195517,NM_001085398	chr10,chr10,chr10	+,+,-	TLX1,TLX1,TLX1NB	-2719,-2719,-2826
chr22:45704365-45705035	chr22	+	45704516	45705024	True	NM_017911,NM_001009880,NM_001104595	chr22,chr22,chr22	+,-,+	FAM118A,KIAA0930,FAM118A	760,-67866,56
chr7:150868059-150868833	chr7	+	150868211	150868650	True	NM_001098834,NM_019015	chr7,chr7	-,+	GBX1,CHPF2	-3344,60934
chr7:71876934-71877147	chr7	+	71876934	71877122	True	NR_001588,NM_031468	chr7,chr7	+,-	SBDSP1,CALN1	422829,288
chr7:66137273-66137930	chr7	+	66137535	66137916	True	NM_153033,NR_002933	chr7,chr7	+,-	KCTD7,LOC493754	-43726,-94037
chr7:66137273-66137930	chr7	+	66100428	66100809	False	NM_153033,NM_001167961,NR_002933	chr7,chr7,chr7	+,+,-	KCTD7,KCTD7,LOC493754	-6619,-6619,-56930
chr7:56671044-56672251	chr7	+	56671110	56672259	True	NR_029420,NR_026929	chr7,chr7	-,+	LOC650226,DKFZp434L192	-155042,-107246
chrX:32137128-32137722	chrX	+	32137477	32137742	True	NM_203391,NM_004013	chrX,chrX	+,-	GK,DMD	-1466052,35895
chr7:753026-753856	chr7	+	753089	753781	True	NM_001164762,NM_001164761,NM_002735,NM_017802	chr7,chr7,chr7,chr7	-,-,-,+	PRKAR1B,PRKAR1B,PRKAR1B,HEATR2	-512,-245,-928,12556
chr3:38208203-38209251	chr3	+	38208337	38209266	True	NM_005109,NR_024024	chr3,chr3	+,-	OXSR1,ACAA1	-1372,-29604
chr5:150122106-150122431	chr5	+	150122109	150122412	True	NM_032947,NM_001135644	chr5,chr5	+,-	C5orf62,DCTN4	35095,15725
chr2:220109167-220109994	chr2	+	220109304	220109777	True	NM_006000,NR_026909,NR_003063,NM_001008910,NM_024506	chr2,chr2,chr2,chr2,chr2	-,+,+,+,-	TUBA4A,STK16,TUBA4B,STK16,GLB1L	8918,423,8187,414,411
chrX:114468450-114468831	chrX	+	114468746	114468876	True	NM_001145346,NM_020871	chrX,chrX	+,-	RBMXL3,LRCH2	-44843,-111
chr12:123836517-123836949	chr12	+	123836810	123836892	True	NM_018183,NM_020382,NM_001167856	chr12,chr12,chr12	-,+,-	SBNO1,SETD8,SBNO1	-1822,31811,-1822
chr1:44113714-44114994	chr1	+	44113938	44114625	True	NR_033827,NM_014663	chr1,chr1	-,+	LOC100132774,KDM4A	58437,1171
chr3:9290405-9291015	chr3	+	9290404	9290859	True	NM_001114092,NM_014850,NM_001033117	chr3,chr3,chr3	+,-,-	THUMPD3,SRGAP3,SRGAP3	113857,502,502
chr2:219222313-219223781	chr2	+	219222362	219222987	True	NM_198559,NM_022152	chr2,chr2	+,-	C2orf62,TMBIM1	-834,-65082
chr16:23691118-23691352	chr16	+	23691176	23691332	True	NM_005030,NM_033266	chr16,chr16	+,-	PLK1,ERN2	-1026,33539
chr1:75591481-75591817	chr1	+	75591529	75591835	True	NM_001001933,NM_001889	chr1,chr1	+,-	LHX8,CRYZ	2283,-392437
chr6:82461259-82462013	chr6	+	82461277	82461905	True	NM_006670,NM_017633	chr6,chr6	+,-	TPBG,FAM46A	611017,573
chr1:230204375-230204721	chr1	+	230204419	230204757	True	NM_004481,NM_024554	chr1,chr1	+,-	GALNT2,PGBD5	-1514,308684
chr14:102416231-102417367	chr14	+	102416482	102417356	True	NM_001376,NM_005348	chr14,chr14	+,-	DYNC1H1,HSP90AA1	13508,136206
chr19:55989051-55989291	chr19	+	55989199	55989279	True	NM_024710,NM_020378,NM_033113	chr19,chr19,chr19	-,+,+	ISOC2,NAT14,ZNF628	-16150,7277,-1552
chr16:70831165-70833053	chr16	+	70831346	70833071	True	NR_034083,NM_018052	chr16,chr16	+,-	LOC100130894,VAC14	-42441,2041
chr19:751769-752157	chr19	+	751795	752203	True	NM_214710,NM_173481	chr19,chr19	-,+	PRSS57,C19orf21	-56334,-700
chr15:89530822-89531968	chr15	+	89530888	89531995	True	NM_007011,NM_005928	chr15,chr15	+,-	ABHD2,MFGE8	99385,-74225
chr20:61473833-61475106	chr20	+	61474309	61475029	True	NM_006602,NM_080750	chr20,chr20	-,+	TCFL5,DPH3P1	18136,1446
chr22:38089023-38089809	chr22	+	38089220	38089857	True	NM_006498,NM_024313,NM_001039141	chr22,chr22,chr22	-,+,+	LGALS2,NOL12,TRIOBP	-113196,-6927,3137
chr15:90294276-90294485	chr15	+	90294344	90294534	True	NM_018670,NM_001039958	chr15,chr15	-,+	MESP1,MESP2	56,25054
chr5:176781055-176781488	chr5	+	176781277	176781519	True	NM_006816,NM_006480	chr5,chr5	-,+	LMAN2,RGS14	-2392,3324
chr2:202048217-202049136	chr2	+	202048221	202049025	True	NM_001230,NM_032977,NM_032974,NM_173822	chr2,chr2,chr2,chr2	+,+,+,-	CASP10,CASP10,CASP10,FAM126B	-663,-663,-663,-111829
chr19:15163038-15164348	chr19	+	15163042	15164376	True	NM_006844,NM_012114	chr19,chr19	-,+	ILVBL,CASP14	72251,-2802
chr20:54965656-54966399	chr20	+	54965898	54966418	True	NM_003600,NM_198433,NM_198434,NM_198435,NM_198436,NM_198437,NM_001033522,NM_001033521,NM_001324	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	-,-,-,-,-,-,+,+,+	AURKA,AURKA,AURKA,AURKA,AURKA,AURKA,CSTF1,CSTF1,CSTF1	983,983,983,983,983,983,1288,1008,1155
chr10:118033776-118033981	chr10	+	118033824	118033992	True	NM_005264,NM_145793,NM_198515,NM_001145453	chr10,chr10,chr10,chr10	-,-,+,-	GFRA1,GFRA1,C10orf96,GFRA1	-698,-2005,49947,-1028
chr1:156710735-156711051	chr1	+	156710926	156711098	True	NM_015997,NM_024540,NM_145729	chr1,chr1,chr1	+,-,-	RRNAD1,MRPL24,MRPL24	-12715,-3,-3
chr17:39941814-39942174	chr17	+	39941893	39942219	True	NM_002230,NM_021991,NM_021939	chr17,chr17,chr17	-,-,+	JUP,JUP,FKBP10	795,795,26742
chr8:96146906-96147722	chr8	+	96146912	96147414	True	NR_037484,NM_024613	chr8,chr8	-,+	MIR3150B,PLEKHF2	-61688,-1015
chr3:89156090-89156623	chr3	+	89156098	89156517	True	NM_182644,NM_001195308,NM_005233	chr3,chr3,chr3	+,-,+	EPHA3,CGGBP1,EPHA3	156,-957082,156
chr4:37024652-37026425	chr4	+	37024680	37025981	True	NM_001085399,NM_001144990	chr4,chr4	-,+	RELL1,KIAA1239	662069,220708
chr6:167571322-167571595	chr6	+	167571346	167571622	True	NM_005299,NM_001145121	chr6,chr6	-,+	GPR31,TCP10L2	-27,12458
chr18:23804773-23806347	chr18	+	23804808	23806167	True	NM_005640,NM_005637	chr18,chr18	+,-	TAF4B,SS18	241,-134197
chr4:2261860-2262276	chr4	+	2261992	2262188	True	NM_001193282,NM_006454	chr4,chr4	+,-	LOC402160,MXD4	158512,1601
chr6:96027412-96028321	chr6	+	96027701	96028330	True	NM_001143957,NM_024641	chr6,chr6	-,+	GPR63,MANEA	1257077,-2347
chr13:20357152-20357715	chr13	+	20357167	20357338	True	NM_001042414,NM_017520,NR_003272	chr13,chr13,chr13	-,+,-	PSPC1,MPHOSPH8,PSPC1	-84,-149430,-84
chr12:122908859-122909147	chr12	+	122908936	122909055	True	NM_002956,NM_198240,NM_014708	chr12,chr12,chr12	-,-,+	CLIP1,CLIP1,KNTC1	-1820,-1820,102753
chr11:11640924-11641901	chr11	+	11640973	11641744	True	NM_198516,NM_017944	chr11,chr11	-,+	GALNTL4,USP47	1867,221225
chr22:50148739-50150084	chr22	+	50149048	50150024	True	NM_014838,NR_026993	chr22,chr22	+,-	ZBED4,LOC90834	97472,23984
chr1:154197628-154198197	chr1	+	154197672	154198235	True	NM_138740,NM_001098616,NM_015449,NM_014847,NM_001127320	chr1,chr1,chr1,chr1,chr1	-,-,-,+,+	C1orf43,C1orf43,C1orf43,UBAP2L,UBAP2L	-4399,-4399,-4399,-4398,-5068
chr16:50730145-50731009	chr16	+	50730288	50730986	True	NM_022162,NM_182854	chr16,chr16	+,-	NOD2,SNX20	63,-15024
chr2:176979913-176980726	chr2	+	176979925	176980685	True	NM_002148,NM_014213,NM_001080458,NM_021192	chr2,chr2,chr2,chr2	+,+,-,+	HOXD10,HOXD9,EVX2,HOXD11	806,6727,-31235,-7892
chrX:12899268-12900128	chrX	+	12899415	12900107	True	NM_016562,NR_030727	chrX,chrX	+,-	TLR7,LOC349408	-14278,61369
chr14:53020358-53020654	chr14	+	53020453	53020652	True	NM_020784,NM_001160047,NM_001099652	chr14,chr14,chr14	-,-,+	TXNDC16,TXNDC16,GPR137C	-1152,-1152,-639
chr20:2276796-2278538	chr20	+	2276912	2278360	True	NR_003684,NM_003245	chr20,chr20	-,+	SNORD119,TGM3	165383,-350
chr8:109455821-109456093	chr8	+	109455880	109456142	True	NM_001568,NM_014673	chr8,chr8	-,+	EIF3E,TTC35	-194921,-78
chr20:30028227-30029617	chr20	+	30028278	30029534	True	NM_153324,NM_001171832	chr20,chr20	+,-	DEFB123,DEFB121	82,-27637
chr9:138390702-138391432	chr9	+	138390810	138391188	True	NM_144654,NM_001048265,NM_016034	chr9,chr9,chr9	-,-,+	C9orf116,C9orf116,MRPS2	623,623,1294
chr5:175138244-175138661	chr5	+	175138259	175138683	True	NM_022304,NM_032361	chr5,chr5	+,-	HRH2,THOC3	-29846,256912
chr1:154964841-154965417	chr1	+	154964942	154965274	True	NM_025207,NM_003029,NM_018655,NM_001184892,NM_001184891,NM_015872,NM_201398	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,-,+,+,+,+,+	FLAD1,SHC1,LENEP,FLAD1,FLAD1,ZBTB7B,FLAD1	-9223,-17983,787,-9223,-9223,9837,-9223
chr7:5571399-5571992	chr7	+	5571512	5571688	True	NM_001101,NM_003088	chr7,chr7	-,+	ACTB,FSCN1	-1280,60765
chr10:45473880-45474167	chr10	+	45473914	45474058	True	NM_007021,NM_032023	chr10,chr10	-,+	C10orf10,RASSF4	322,-18746
chr20:9496890-9497980	chr20	+	9496944	9498007	True	NM_012261,NM_001199897,NM_020341	chr20,chr20,chr20	+,+,-	C20orf103,C20orf103,PAK7	-1990,-1990,321730
chr15:23438114-23439017	chr15	+	23438435	23438629	True	NR_002824,NR_033350	chr15,chr15	-,+	HERC2P2,GOLGA8E	-60176,-3416
chr15:23438114-23439017	chr15	+	28627278	28627340	False	NM_004667,NR_033351,NR_033353	chr15,chr15,chr15	-,+,+	HERC2,GOLGA8F,GOLGA8G	-59983,-3548,-3548
chr15:23438114-23439017	chr15	-	28774586	28774648	False	NR_036443,NR_033351,NR_033353	chr15,chr15,chr15	+,-,-	HERC2P9,GOLGA8F,GOLGA8G	124939,3548,3548
chr15:23438114-23439017	chr15	+	20771037	20771231	False	NM_001145004,NR_027411	chr15,chr15	-,+	GOLGA6L6,GOLGA8C	-23923,-3414
chr15:23438114-23439017	chr15	-	22712168	22712362	False	NR_027407,NM_001001413	chr15,chr15	-,+	GOLGA8DP,GOLGA6L1	3416,23883
chr16:30568710-30568997	chr16	+	30568814	30568980	True	NM_001172679,NM_002209,NM_033410	chr16,chr16,chr16	-,+,-	ZNF764,ITGAL,ZNF764	712,-84882,712
chr12:57852822-57853139	chr12	+	57852826	57853054	True	NM_001167609,NM_001080156,NM_031479,NM_005269,NM_001160045	chr12,chr12,chr12,chr12,chr12	+,-,+,+,+	GLI1,ARHGAP9,INHBE,GLI1,GLI1	879,18724,-3781,879,863
chr16:1274838-1275205	chr16	+	1274871	1275231	True	NM_012467,NM_024164,NM_003294	chr16,chr16,chr16	-,-,+	TPSG1,TPSB2,TPSAB1	73,5004,15446
chr4:95373523-95374950	chr4	+	95373574	95374918	True	NM_001011513,NM_001011516,NM_001011515,NM_014485,NM_006457,NR_024179	chr4,chr4,chr4,chr4,chr4,chr4	+,+,+,-,+,+	PDLIM5,PDLIM5,PDLIM5,HPGDS,PDLIM5,PDLIM5	-587,-587,-587,-109547,-587,-587
chr17:62951474-62951917	chr17	+	62951491	62951718	True	NR_026903,NM_001165933	chr17,chr17	-,+	AMZ2P1,RGS9	20044,181737
chr18:32346473-32347192	chr18	+	32346901	32347212	True	NM_001390,NM_001112734	chr18,chr18	+,-	DTNA,ZSCAN30	-11019,523034
chr16:3999625-4000137	chr16	+	3999774	4000186	True	NM_005223,NM_004380	chr16,chr16	+,-	DNASE1,CREBBP	-296885,-69653
chr3:124445609-124447291	chr3	+	124445755	124446957	True	NM_002213,NR_033437,NR_033434,NM_000373	chr3,chr3,chr3,chr3	-,+,+,+	ITGB5,UMPS,UMPS,UMPS	159245,2255,2255,2255
chr16:28835517-28835723	chr16	+	28835552	28835752	True	NM_007245,NM_003321,NM_145714,NM_148416,NM_148415,NM_148414	chr16,chr16,chr16,chr16,chr16,chr16	+,-,+,+,+,+	ATXN2L,TUFM,ATXN2L,ATXN2L,ATXN2L,ATXN2L	-1189,22027,-1189,-1189,-1189,-1189
chr9:33026443-33027244	chr9	+	33026553	33027139	True	NM_001539,NR_036577	chr9,chr9	+,-	DNAJA1,APTX	-1398,-24914
chr8:38585195-38585917	chr8	+	38585558	38585894	True	NM_001146216,NR_003129	chr8,chr8	+,-	TACC1,RNF5P1	-38,-126783
chr19:36390378-36390625	chr19	+	36390562	36390644	True	NM_001007469,NM_003332,NM_001173514,NM_001173515,NR_033390,NM_198125,NM_139239,NM_014266	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,-,-,-,-,-,+	HCST,TYROBP,TYROBP,TYROBP,TYROBP,TYROBP,NFKBID,HCST	2737,8617,8617,8617,8617,8617,958,2737
chr12:7025019-7025235	chr12	+	7025048	7025235	True	NM_032641,NM_001007026,NM_001975	chr12,chr12,chr12	-,+,+	SPSB2,ATN1,ENO2	-42527,8390,-1485
chr11:66083709-66083974	chr11	+	66083726	66084000	True	NM_020404,NM_153266	chr11,chr11	-,+	CD248,TMEM151A	565,-24404
chrX:148864132-148864530	chrX	+	148864198	148864571	True	NM_016153,NM_001164415,NM_032508,NM_005365,NM_001080790	chrX,chrX,chrX,chrX,chrX	+,+,-,+,+	HSFX1,HSFX2,TMEM185A,MAGEA9,MAGEA9B	-8523,-8523,-150711,-649,-656
chrX:148864132-148864530	chrX	-	148668136	148668510	False	NM_016153,NM_001164415,NM_005365,NM_001171909,NM_001080790	chrX,chrX,chrX,chrX,chrX	-,-,-,+,-	HSFX1,HSFX2,MAGEA9,CXorf40A,MAGEA9B	8514,8514,649,-42121,656
chr21:33983862-33984117	chr21	+	33983986	33984138	True	NM_021254,NR_024622,NR_036552	chr21,chr21,chr21	-,+,-	C21orf59,C21orf49,C21orf59	830,160272,825
chr6:44268009-44268347	chr6	+	44268009	44268375	True	NM_001137560,NM_182539	chr6,chr6	+,-	TMEM151B,TCTE1	-29582,-2551
chr20:9820005-9820418	chr20	+	9820049	9820415	True	NM_177990,NM_022096,NM_020341	chr20,chr20,chr20	-,+,-	PAK7,ANKRD5,PAK7	-362,195281,-362
chr7:150786049-150786505	chr7	+	150786180	150786504	True	NM_031434,NM_031946,NM_001042535,NM_001136044,NM_033015,NM_006712	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,-,-,-	TMUB1,AGAP3,AGAP3,TMUB1,FASTK,FASTK	-5767,-2405,-2405,-5560,-8229,-8229
chrY:14460599-14461646	chrY	+	14460707	14461694	True	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	312603,71748
chr15:74990815-74992488	chr15	+	74990867	74991682	True	NM_001142443,NM_000761,NM_025083,NM_001142444	chr15,chr15,chr15,chr15	-,+,-,-	EDC3,CYP1A2,EDC3,EDC3	-2481,49501,-2481,-2481
chr1:46048864-46049355	chr1	+	46049003	46049351	True	NM_002482,NM_001195193,NM_001114938,NM_152298	chr1,chr1,chr1,chr1	+,+,-,+	NASP,NASP,CCDC17,NASP	308,308,40430,308
chr13:111766617-111766986	chr13	+	111766721	111766917	True	NM_001113512,NM_145735,NM_001113511,NM_017664	chr13,chr13,chr13,chr13	+,+,+,-	ARHGEF7,ARHGEF7,ARHGEF7,ANKRD10	706,706,706,-199305
chr1:111682489-111682750	chr1	+	111682492	111682700	True	NM_178454,NM_006090,NM_001007794	chr1,chr1,chr1	-,+,+	DRAM2,CEPT1,CEPT1	188,132,-294
chr11:16761504-16762360	chr11	+	16761505	16761909	True	NM_014267,NM_033326	chr11,chr11	+,-	C11orf58,SOX6	-1418,-263570
chr17:6618382-6618701	chr17	+	6618627	6618735	True	NM_177550,NM_001143838,NM_017523	chr17,chr17,chr17	-,-,+	SLC13A5,SLC13A5,XAF1	-1887,-1887,40420
chr2:62078657-62080205	chr2	+	62078737	62080027	True	NR_037710,NM_032180,NM_001201543,NM_152516	chr2,chr2,chr2,chr2	-,-,-,+	FAM161A,FAM161A,FAM161A,COMMD1	1312,1312,1312,52775
chr18:19284901-19285334	chr18	+	19285025	19285258	True	NM_138340,NR_031565	chr18,chr18	-,+	ABHD3,MIR320C1	-259,-21605
chr19:5981335-5982759	chr19	+	5981538	5982665	True	NM_080590,NM_007322,NM_003624,NM_007320	chr19,chr19,chr19,chr19	+,-,-,-	CAPS,RANBP3,RANBP3,RANBP3	-67396,-3218,-3218,-3218
chrY:296162-297188	chrY	+	296175	297139	True	NR_027232,NM_013239	chrY,chrY	+,-	NCRNA00107,PPP2R3B	-64841,601
chrY:296162-297188	chrX	+	346175	347139	False	NR_027232,NM_013239	chrX,chrX	+,-	NCRNA00107,PPP2R3B	-64841,601
chr2:8822363-8822572	chr2	+	8822378	8822558	True	NM_020738,NM_002166	chr2,chr2	-,+	KIDINS220,ID2	155247,-316
chr16:67222759-67222996	chr16	+	67222787	67223039	True	NM_024712,NM_001950,NM_178516,NM_001040715	chr16,chr16,chr16,chr16	+,+,-,-	ELMO3,E2F4,EXOC3L1,KIAA0895L	9988,3028,1118,-4904
chr7:72633495-72633962	chr7	+	72633494	72633566	True	NR_002164,NR_003186	chr7,chr7	-,+	GTF2IRD2P1,NCF1B	52142,1107
chr7:72633495-72633962	chr7	-	74588863	74588935	False	NM_001003795,NR_003187	chr7,chr7	+,-	GTF2IRD2B,NCF1C	-80567,-1047
chr7:72633495-72633962	chr7	+	74187195	74187267	False	NM_173537,NM_000265	chr7,chr7	-,+	GTF2IRD2,NCF1	80624,1041
chr5:134367352-134367670	chr5	+	134367354	134367626	True	NM_002653,NM_178019	chr5,chr5	-,+	PITX1,CATSPER3	2388,-63809
chr14:24628478-24629156	chr14	+	24628739	24629146	True	NM_006084,NM_002818	chr14,chr14	+,-	IRF9,PSME2	1275,-12884
chr19:8922134-8924075	chr19	+	8922221	8923909	True	NM_145208,NM_144693	chr19,chr19	+,-	MBD3L1,ZNF558	29359,9712
chr3:186438767-186440463	chr3	+	186438979	186440305	True	NM_001102416,NM_002916,NM_001166451,NM_000893	chr3,chr3,chr3,chr3	+,-,+,+	KNG1,RFC4,KNG1,KNG1	-3933,84035,-3933,-3933
chr4:76863320-76863970	chr4	+	76863685	76863841	True	NM_014435,NM_001042402,NM_001130017	chr4,chr4,chr4	-,-,+	NAAA,NAAA,ART3	-1519,-1519,68495
chr1:159769738-159770176	chr1	+	159769774	159770192	True	NM_001134233,NM_001004310	chr1,chr1	-,+	C1orf204,FCRL6	54995,1980
chr2:113883873-113884159	chr2	+	113883888	113884213	True	NM_173842,NM_000577,NM_173841,NM_173178,NM_173843	chr2,chr2,chr2,chr2,chr2	+,+,+,-,+	IL1RN,IL1RN,IL1RN,IL1F8,IL1RN	924,-8469,-8469,-73448,-8469
chr16:48660803-48661282	chr16	+	48660881	48661321	True	NM_153029,NM_031490	chr16,chr16	-,+	N4BP1,LONP2	-16761,-382726
chr10:45986877-45987904	chr10	+	45987104	45987679	True	NM_001002266,NM_000698	chr10,chr10	-,+	MARCH8,ALOX5	43197,-117537
chr12:66218428-66218654	chr12	+	66218443	66218675	True	NM_003483,NR_026825,NM_003484	chr12,chr12,chr12	+,-,+	HMGA2,RPSAP52,HMGA2	-254,2129,-254
chr6:42018601-42019144	chr6	+	42018660	42019155	True	NM_138572,NM_001136126,NM_001136017	chr6,chr6,chr6	+,-,-	TAF8,CCND3,CCND3	-460,-2050,-2050
chr5:68512844-68513547	chr5	+	68513059	68513490	True	NM_033281,NM_176816	chr5,chr5	+,-	MRPS36,CCDC125	82,102970
chr8:182635-182979	chr1	-	762313	762363	True	NR_024321,NR_015368	chr1,chr1	-,+	NCRNA00115,LOC643837	589,700
chr16:75501834-75502256	chr16	+	75501834	75502264	True	NM_145254,NM_007285	chr16,chr16	-,+	TMEM170A,GABARAPL2	-3250,97984
chr12:55007322-55008605	chr12	+	55007683	55008603	True	NM_001165975,NR_003039	chr12,chr12	+,-	PDE1B,GLYCAM1	-52635,-3437
chr2:120436263-120436536	chr2	+	120436439	120436499	True	NM_001105199,NM_001105198,NM_002980,NM_030577	chr2,chr2,chr2,chr2	+,+,-,+	TMEM177,TMEM177,SCTR,TMEM177	243,243,-154411,243
chr3:169525956-169527835	chr3	+	169526228	169527641	True	NM_001080460,NM_001172779,NM_153353,NM_001172780	chr3,chr3,chr3,chr3	+,-,-,-	LRRIQ4,LRRC34,LRRC34,LRRC34	12068,2996,2996,2996
chr14:77436710-77438376	chr14	+	77436981	77438285	True	NM_024496,NM_033426	chr14,chr14	-,+	IRF2BPL,KIAA1737	56799,126292
chr2:178780879-178781577	chr2	+	178780883	178781397	True	NM_001077358,NM_152945	chr2,chr2	-,+	PDE11A,RBM45	6217,195784
chr20:42183642-42184100	chr20	+	42183785	42184079	True	NM_001199264,NM_001008901,NM_170693	chr20,chr20,chr20	+,-,+	SGK2,GTSF1L,SGK2	9675,171613,3555
chr17:80799111-80800023	chr17	+	80799493	80799799	True	NM_024702,NM_005993	chr17,chr17	-,+	ZNF750,TBCD	-1562,-89605
chr7:50513317-50514453	chr7	+	50513334	50514485	True	NM_001042762,NM_022116,NR_033845	chr7,chr7,chr7	-,-,+	FIGNL1,FIGNL1,LOC100129427	3653,3653,84971
chr3:36432079-36433152	chr3	+	36432113	36433167	True	NM_003149,NM_033403	chr3,chr3	+,-	STAC,DCLK3	-10077,348235
chr1:32739750-32739954	chr1	+	32739803	32740003	True	NM_001042771,NR_026850	chr1,chr1	+,-	LCK,MTMR9LP	-142,-32492
chr17:34264329-34265343	chr17	+	34264338	34265222	True	NM_001163124,NM_001163125,NM_001034836,NM_001163120,NM_001163121,NM_001163122,NM_001163130,NR_027998,NM_002988,NM_020426,NM_145654,NR_027999,NM_001199951,NR_027997,NR_027996,NR_028000	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,-,-,-,+,-,-,-,-,-,-,-	RDM1,RDM1,RDM1,RDM1,RDM1,RDM1,RDM1,RDM1,CCL18,LYZL6,RDM1,RDM1,LYZL6,RDM1,RDM1,RDM1	-7035,-7035,-6558,-6558,-6558,-7035,-7035,-6558,126420,1388,-6558,-7035,5531,-6558,-6558,-7035
chr19:2820255-2820483	chr19	+	2820320	2820460	True	NM_003021,NM_001102651	chr19,chr19	-,+	SGTA,ZNF554	-36966,-499
chr11:60214060-60215960	chr11	+	60214238	60215993	True	NM_021950,NM_022349,NM_152866	chr11,chr11,chr11	+,-,+	MS4A1,MS4A6A,MS4A1	7288,-263564,7288
chr2:51253574-51254574	chr2	+	51253683	51254555	True	NM_001135659,NM_006872,NM_004801	chr2,chr2,chr2	-,+,-	NRXN1,GTF2A1L,NRXN1	5169,-2408805,5169
chr9:69429380-69431031	chr9	+	69429773	69430508	True	NM_001085457,NM_001098805	chr9,chr9	-,+	CBWD6,ANKRD20A4	-167180,-47843
chr3:4344651-4345165	chr3	+	4344801	4345113	True	NR_024022,NM_001164674,NM_006515	chr3,chr3,chr3	+,-,+	SETMAR,SUMF1,SETMAR	183,163903,90
chr3:122137055-122137315	chr3	+	122137081	122137196	True	NM_014367,NM_019069	chr3,chr3	+,-	FAM162A,WDR5B	-34114,-2199
chr7:44162051-44162983	chr7	+	44162338	44162907	True	NM_001129,NM_006230,NM_001127218	chr7,chr7,chr7	+,-,-	AEBP1,POLD2,POLD2	-18429,290,290
chr19:19005633-19005923	chr19	+	19005653	19005923	True	NM_198207,NM_021267,NM_019070,NM_001492	chr19,chr19,chr19,chr19	-,-,+,-	LASS1,LASS1,DDX49,GDF1	1080,1080,24560,1080
chr19:36022672-36024492	chr19	+	36023370	36024462	True	NM_001166035,NM_001166034,NM_014364,NM_198538	chr19,chr19,chr19,chr19	-,-,+,-	SBSN,SBSN,GAPDHS,SBSN	-4117,-4117,89,-4117
chrX:99665575-99665867	chrX	+	99665579	99665891	True	NM_001105243,NM_001184880,NM_022144,NM_020766	chrX,chrX,chrX,chrX	-,-,+,-	PCDH19,PCDH19,TNMD,PCDH19	-308,-308,173898,-308
chr12:54330954-54331970	chr12	+	54331228	54332008	True	NM_017410,NR_003716	chr12,chr12	+,-	HOXC13,HOTAIR	567,30557
chr11:130297122-130297425	chr11	+	130297129	130297316	True	NM_007037,NM_139055	chr11,chr11	-,+	ADAMTS8,ADAMTS15	1274,21552
chr18:2846720-2846944	chr18	+	2846763	2846835	True	NR_026659,NM_032048	chr18,chr18	-,+	LOC727896,EMILIN2	99836,192
chr7:148132870-148133241	chr7	+	148132966	148133208	True	NM_145304,NM_001203249	chr7,chr7	+,-	C7orf33,EZH2	154448,447443
chr2:158126409-158126662	chr2	+	158126408	158126688	True	NM_014568,NM_020711	chr2,chr2	+,-	GALNT5,ERMN	-12124,55778
chr19:3983217-3984171	chr19	+	3983533	3984187	True	NR_002602,NM_015897,NM_001961	chr19,chr19,chr19	-,+,-	SNORD37,PIAS4,EEF2	-963,23561,1324
chr8:110552120-110552349	chr8	+	110552227	110552363	True	NM_004215,NM_198120,NM_001099756	chr8,chr8,chr8	+,+,-	EBAG9,EBAG9,SYBU	28,-349,103106
chr5:160365428-160365995	chr5	+	160365452	160366042	True	NR_029701,NR_027111	chr5,chr5	+,-	MIR146A,LOC285629	-453144,43
chr10:13031512-13031972	chr10	+	13031721	13031903	True	NM_031455,NM_001008211	chr10,chr10	-,+	CCDC3,OPTN	11851,110178
chr4:103982652-103983430	chr4	+	103982969	103983217	True	NM_001008388,NM_178833	chr4,chr4	+,-	CISD2,NHEDC2	-192899,15015
chr18:60109176-60110112	chr18	+	60109241	60110151	True	NM_176787,NM_017742	chr18,chr18	-,+	PIGN,ZCCHC2	-254952,80506
chr12:54898946-54899739	chr12	+	54899022	54899419	True	NM_005337,NM_144594,NM_001184976	chr12,chr12,chr12	+,-,+	NCKAP1L,GTSF1,NCKAP1L	-7578,-31636,-6505
chr3:109128468-109129276	chr3	+	109128521	109128951	True	NM_018189,NM_001145553	chr3,chr3	-,+	DPPA4,FLJ25363	-72102,35
chr20:1292945-1293212	chr20	+	1292973	1293259	True	NM_014723,NM_015685	chr20,chr20	+,-	SNPH,SDCBP2	-46064,1108
chr19:9608671-9609020	chr19	+	9608700	9609008	True	NM_152476,NM_001172651	chr19,chr19	-,+	ZNF560,ZNF177	321,-121767
chr1:3607457-3607760	chr1	+	3607487	3607729	True	NM_001126242,NM_001204189,NM_001126240,NM_001126241,NM_001204192,NM_001204191,NM_001204190,NM_017818	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,+,+,-	TP73,TP73,TP73,TP73,TP73,TP73,TP73,WDR8	-302,-302,-302,-302,6880,-302,-302,-40816
chrX:38185550-38185953	chrX	+	38185618	38185982	True	NM_001034853,NM_000328,NM_000531	chrX,chrX,chrX	-,-,+	RPGR,RPGR,OTC	856,856,25753
chr12:570986-571191	chr12	+	571037	571153	True	NM_001042603,NM_173593	chr12,chr12	-,+	KDM5A,B4GALNT3	-72417,-1545
chr19:50264271-50265286	chr19	+	50264484	50265306	True	NM_130787,NM_014203,NM_021733	chr19,chr19,chr19	+,+,-	AP2A1,AP2A1,TSKS	4873,4873,1259
chr7:50107306-50108118	chr7	+	50107443	50108135	True	NM_001159878,NM_001161834	chr7,chr7	-,+	ZPBP,C7orf72	24783,27546
chr20:37354584-37354831	chr20	+	37354715	37354829	True	NM_080552,NR_027241	chr20,chr20	+,-	SLC32A1,LOC388796	-1661,-290697
chr1:206292505-206293654	chr1	+	206292764	206293517	True	NM_001910,NM_001007544	chr1,chr1	+,-	CTSE,C1orf186	23941,-4117
chr12:120933397-120933603	chr12	+	120933412	120933594	True	NM_003769,NM_001037495,NM_003746	chr12,chr12,chr12	-,+,+	SRSF9,DYNLL1,DYNLL1	-25854,264,264
chrX:122994305-122994537	chrX	+	122994351	122994580	True	NM_001167,NM_001204401,NR_037916,NM_001081550	chrX,chrX,chrX,chrX	+,+,+,-	XIAP,XIAP,XIAP,THOC2	-385,-740,-385,-127447
chr15:45810820-45812558	chr15	+	45810890	45812381	True	NR_022014,NM_013309	chr15,chr15	+,-	HMGN2P46,SLC30A4	-7607,2679
chr19:14694358-14695228	chr19	+	14694675	14695268	True	NM_004146,NM_207390,NM_001204118	chr19,chr19,chr19	-,+,+	NDUFB7,CLEC17A,CLEC17A	-11786,-837,-837
chr19:14694358-14695228	chr19	+	14699479	14699529	False	NM_004146,NM_207390,NM_001204118	chr19,chr19,chr19	-,+,+	NDUFB7,CLEC17A,CLEC17A	-16590,-5634,-5634
chr19:38394835-38396401	chr19	+	38395385	38395555	True	NM_031951,NM_015073	chr19,chr19	-,+	WDR87,SIPA1L3	1824,2312
chr9:134615625-134615854	chr9	+	134615662	134615766	True	NM_007171,NM_005312	chr9,chr9	+,-	POMT1,RAPGEF1	-237424,-2737
chrX:153744803-153745485	chrX	+	153744878	153745380	True	NM_001171134,NM_021806,NM_001171132,NM_001171133,NM_001099856,NR_033237	chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,+,-	FAM3A,FAM3A,FAM3A,FAM3A,IKBKG,FAM3A	-312,-312,-312,-312,25078,-312
chr17:41466951-41467517	chr17	+	41467050	41467264	True	NR_027412,NR_027413,NM_001661	chr17,chr17,chr17	-,-,+	LOC100130581,LOC100130581,ARL4D	-784,-784,9088
chr6:34759016-34759547	chr6	+	34759018	34759586	True	NM_017754,NM_024294	chr6,chr6	+,-	UHRF1BP1,C6orf106	207,-94393
chr20:44517456-44518546	chr20	+	44517459	44517982	True	NM_080749,NM_080608,NM_001167594,NM_080603,NM_000308,NM_001127695	chr20,chr20,chr20,chr20,chr20,chr20	-,-,+,+,+,+	NEURL2,C20orf165,CTSA,ZSWIM1,CTSA,CTSA	1970,-1221,1608,-7662,1608,1608
chr1:154578801-154580453	chr1	+	154579097	154580407	True	NM_015841,NM_015840,NM_001193495,NM_000748,NM_001111	chr1,chr1,chr1,chr1,chr1	-,-,-,+,-	ADAR,ADAR,ADAR,CHRNB2,ADAR	367,367,-321,-38891,367
chr15:102032236-102032695	chr15	+	102032235	102032723	True	NM_002570,NM_001005326,NM_138324,NM_138319,NM_138325,NM_138322,NM_138323,NM_138320,NM_138321	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,+,-,-,-,-,-,-,-	PCSK6,OR4F6,PCSK6,PCSK6,PCSK6,PCSK6,PCSK6,PCSK6,PCSK6	-2048,313199,-2048,-2048,-2048,-2048,-2048,-2048,-2048
chr1:10003552-10004283	chr1	+	10003650	10004030	True	NM_032368,NM_022787	chr1,chr1	-,+	LZIC,NMNAT1	-824,-215
chr17:78966916-78967289	chr17	+	78966920	78967318	True	NR_026857,NM_024591	chr17,chr17	-,+	FLJ90757,CHMP6	41251,-1330
chr2:9345193-9346025	chr2	+	9345306	9346039	True	NM_003887,NM_001135191,NM_138799	chr2,chr2,chr2	+,+,-	ASAP2,ASAP2,MBOAT2	854,854,-201430
chr4:154623782-154625000	chr4	+	154623795	154625017	True	NM_173662,NM_003264	chr4,chr4	-,+	RNF175,TLR2	56423,-18419
chr5:152891378-152892971	chr5	+	152891452	152892850	True	NM_018691,NM_001114183	chr5,chr5	-,+	FAM114A2,GRIA1	525697,-21419
chr20:48598838-48599063	chr20	+	48598884	48599064	True	NM_006038,NM_005985	chr20,chr20	-,+	SPATA2,SNAI1	-66804,448
chr5:79549903-79550693	chr5	+	79550262	79550733	True	NM_001174072,NM_178276,NM_001174071,NM_032567	chr5,chr5,chr5,chr5	-,-,-,+	SERINC5,SERINC5,SERINC5,SPZ1	1216,1216,1216,65056
chr9:39811793-39812807	chr9	+	39812306	39812675	True	NR_003528,NM_001085452	chr9,chr9	-,+	LOC653501,FAM75A1	-347780,72299
chr9:39811793-39812807	chr9	+	40629381	40629438	False	NM_001083124,NM_033160	chr9,chr9	+,-	FAM75A3,ZNF658	70852,162731
chr9:39811793-39812807	chr9	+	39283056	39283425	False	NM_033655,NM_001085452	chr9,chr9	-,+	CNTNAP3,FAM75A1	4936,72273
chrX:134882837-134883152	chrX	+	134882982	134883045	True	NM_001017436,NM_001017435	chrX,chrX	-,+	CT45A4,CT45A3	53741,442
chrX:134882837-134883152	chrX	+	134865707	134865770	False	NM_152582,NM_001017436	chrX,chrX	+,+	CT45A2,CT45A4	443,443
chrX:134882837-134883152	chrX	-	134937178	134937241	False	NM_018666,NM_001017436	chrX,chrX	+,-	SAGE1,CT45A4	38543,-443
chrX:134882837-134883152	chrX	-	134954433	134954496	False	NM_001007551,NM_018666,NM_001172288	chrX,chrX,chrX	-,+,-	CT45A5,SAGE1,CT45A5	-439,21288,-439
chr4:166248612-166248818	chr4	+	166248660	166248766	True	NM_001017369,NR_026575,NM_006745	chr4,chr4,chr4	+,-,+	SC4MOL,GK3P,SC4MOL	51,-47485,51
chr6:117739623-117740635	chr6	+	117739677	117740651	True	NM_173674,NM_002944	chr6,chr6	+,-	DCBLD1,ROS1	63168,6420
chr22:24095197-24096538	chr22	+	24095251	24096001	True	NM_013378,NM_021916,NM_182520	chr22,chr22,chr22	-,-,+	VPREB3,ZNF70,C22orf15	679,-1972,9206
chr9:131685516-131686415	chr9	+	131685714	131686004	True	NM_174933,NM_001100877,NM_001100876,NM_014908	chr9,chr9,chr9,chr9	+,+,+,-	PHYHD1,PHYHD1,PHYHD1,DOLK	-2592,-1204,-2592,24058
chr12:57825941-57826221	chr12	+	57826148	57826225	True	NM_005538,NM_001080156	chr12,chr12	+,-	INHBC,ARHGAP9	2317,45554
chr12:121087590-121088088	chr12	+	121087599	121088111	True	NM_031205,NM_001033677,NM_198202,NM_004276	chr12,chr12,chr12,chr12	+,+,-,+	CABP1,CABP1,POP5,CABP1	259,-9228,-68398,259
chr1:112299966-112300636	chr1	+	112300017	112300408	True	NM_198926,NM_007204	chr1,chr1	-,+	C1orf183,DDX20	-1598,-1885
chr3:138327412-138327659	chr3	+	138327420	138327656	True	NM_001033030,NM_001033031,NM_001033032,NM_024491,NM_018147	chr3,chr3,chr3,chr3,chr3	+,+,+,-,+	FAIM,FAIM,FAIM,CEP70,FAIM	71,71,71,-14291,262
chr7:116165167-116165483	chr7	+	116165186	116165466	True	NR_002330,NM_001753,NM_001172896,NM_001172897,NM_001172895	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	ST7OT1,CAV1,CAV1,CAV1,CAV1	428972,-398,880,945,-174
chr12:111807098-111807603	chr12	+	111807102	111807653	True	NM_001177996,NM_001177997,NM_005475,NM_144671	chr12,chr12,chr12,chr12	-,-,+,-	FAM109A,FAM109A,SH2B3,FAM109A	-177,-177,36098,-177
chr19:19431602-19431955	chr19	+	19431625	19431937	True	NM_172231,NM_015329	chr19,chr19	-,+	SUGP1,MAU2	-318,-46
chr10:13340420-13341192	chr10	+	13340976	13341247	True	NM_006214,NM_001037537,NM_182751	chr10,chr10,chr10	-,-,+	PHYH,PHYH,MCM10	942,558,-137473
chr12:96388587-96389064	chr12	+	96388597	96388939	True	NM_152435,NM_002108	chr12,chr12	+,-	AMDHD1,HAL	-51577,1182
chr7:30809873-30810856	chr7	+	30809937	30810810	True	NM_032222,NM_001202481	chr7,chr7	+,-	FAM188B,CRHR2	222,-70218
chr19:17449367-17449653	chr19	+	17449382	17449680	True	NM_133644,NM_001195422,NM_001128855,NM_020959,NM_032620	chr19,chr19,chr19,chr19,chr19	+,+,+,-,+	GTPBP3,GTPBP3,GTPBP3,ANO8,GTPBP3	-1107,-3642,-1107,-3744,-1107
chr17:7084124-7084550	chr17	+	7084314	7084553	True	NM_001671,NM_000018,NM_001197216	chr17,chr17,chr17	-,+,-	ASGR1,ACADVL,ASGR1	-1431,38599,-1431
chr7:112577739-112578895	chr7	+	112577815	112578850	True	NM_152556,NM_182597	chr7,chr7	-,+	C7orf60,C7orf53	1139,-456814
chr9:99960229-99962138	chr6	+	26637222	26638540	False	NM_013375,NM_024639	chr6,chr6	+,-	ABT1,ZNF322A	-40094,21481
chr9:99960229-99962138	chr9	+	99960234	99962074	True	NM_199005,NR_036526	chr9,chr9	-,+	ZNF322B,LOC100499484	-107,38633
chr7:23153304-23154810	chr7	+	23153786	23154840	True	NR_033329,NR_033328,NM_018846,NM_001172428,NM_032581,NM_001031710	chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,-,+	KLHL7,KLHL7,KLHL7,KLHL7,FAM126A,KLHL7	-8484,-8484,-7920,-8484,-100016,-8484
chr20:33736438-33737019	chr20	+	33736620	33736940	True	NM_018217,NM_006404,NR_026728,NM_001145025	chr20,chr20,chr20,chr20	-,+,-,-	EDEM2,PROCR,EDEM2,EDEM2	-1459,22833,-1459,-1459
chr13:51722071-51722653	chr13	+	51722088	51722582	True	NR_003923,NM_145019	chr13,chr13	-,+	GUCY1B2,FAM124A	-81795,73924
chr1:120436832-120437036	chr1	+	120436862	120437018	True	NM_021794,NM_006623	chr1,chr1	-,+	ADAM30,PHGDH	2179,-182501
chr9:38620203-38620473	chr9	+	38620232	38620486	True	NR_027294,NM_147195	chr9,chr9	+,-	FAM201A,ANKRD18A	598,76
chr9:38620203-38620473	chr9	-	95571621	95571978	False	NM_015250,NR_026868	chr9,chr9	-,+	BICD2,ANKRD19	-44538,-86
chr19:17416675-17416889	chr19	+	17416678	17416880	True	NM_024050,NM_024527,NM_023937	chr19,chr19,chr19	+,-,+	DDA1,ABHD8,MRPL34	3456,-2396,-252
chr2:55506043-55507913	chr2	+	55506356	55507815	True	NR_027258,NM_002453	chr2,chr2	+,-	PRORSD1P,MTIF2	1639,-9972
chr17:8700572-8701779	chr17	+	8700616	8701626	True	NM_152599,NM_004822	chr17,chr17	-,+	MFSD6L,NTN1	1091,223232
chr3:196595376-196595772	chr3	+	196595400	196595814	True	NM_152699,NM_001042540	chr3,chr3	+,-	SENP5,NCBP2	-724,73702
chr8:11725802-11726284	chr8	+	11726118	11726324	True	NM_001908,NM_147782,NM_147783,NM_147780,NM_147781,NM_004462	chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,-,+	CTSB,CTSB,CTSB,CTSB,CTSB,FDFT1	-472,-472,-472,-472,-472,-65979
chr4:77990304-77990764	chr4	+	77990313	77990586	True	NM_004354,NM_006835	chr4,chr4	+,-	CCNG2,CCNI	87770,6600
chr10:71080097-71080342	chr10	+	71080105	71080359	True	NM_033496,NM_001057,NM_000188	chr10,chr10,chr10	+,-,+	HK1,TACR2,HK1	-4546,96365,-1553
chr3:149493005-149494980	chr3	+	149493274	149494982	True	NM_007282,NM_001144960	chr3,chr3	+,-	RNF13,C3orf16	35492,15678
chr6:132889183-132890579	chr6	+	132889208	132890612	True	NM_175067,NM_003967	chr6,chr6	+,-	TAAR6,TAAR5	848,20315
chr8:88884607-88884890	chr8	+	88884610	88884938	True	NM_152418,NM_173538	chr8,chr8	-,+	DCAF4L2,CNBD1	1408,-1005985
chr2:210290038-210290619	chr2	+	210290217	210290658	True	NM_152519,NM_001039538	chr2,chr2	-,+	C2orf67,MAP2	745446,-1504
chr11:56014767-56015183	chr11	+	56014769	56015163	True	NM_001004746,NM_001004747	chr11,chr11	-,+	OR5T2,OR5T3	-14108,4512
chr6:134495311-134495634	chr6	+	134495391	134495684	True	NM_004865,NM_001143678,NM_005627,NM_001143677	chr6,chr6,chr6,chr6	+,-,-,-	TBPL1,SGK1,SGK1,SGK1	-221141,1447,411,3387
chr11:64951043-64951345	chr11	+	64951105	64951353	True	NM_172230,NM_001198868,NM_001198870,NM_001198869,NM_005186	chr11,chr11,chr11,chr11,chr11	-,+,+,+,+	SYVN1,CAPN1,CAPN1,CAPN1,CAPN1	-49102,-2470,-1852,-2006,-1852
chrX:154253827-154254211	chrX	+	154254020	154254101	True	NM_023934,NM_000132	chrX,chrX	+,-	FUNDC2,F8	962,-3022
chr2:37894262-37894476	chr2	+	37894266	37894498	True	NM_006449,NM_001170791	chr2,chr2	-,+	CDC42EP3,FAM82A1	4878,257963
chr2:27649749-27650353	chr2	+	27649945	27650083	True	NM_177983,NM_013392	chr2,chr2	-,+	PPM1G,NRBP1	-17449,1389
chr14:62584106-62584390	chr14	+	62584169	62584353	True	NM_001017970,NR_015358	chr14,chr14	-,+	TMEM30B,FLJ43390	-835639,-145
chr2:154334352-154334602	chr2	+	154334474	154334650	True	NM_019845,NM_052917	chr2,chr2	-,+	RPRM,GALNT13	722,393775
chr10:114057901-114058552	chr10	+	114057929	114058513	True	NR_028134,NM_058222	chr10,chr10	-,+	GUCY2GP,TECTB	57890,-14487
chr2:154335723-154336043	chr2	+	154335742	154336081	True	NM_019845,NM_052917	chr2,chr2	-,+	RPRM,GALNT13	-420,392344
chr19:51871847-51873037	chr19	+	51871985	51873055	True	NM_001985,NM_152353,NR_033235,NM_005601	chr19,chr19,chr19,chr19	-,-,+,-	ETFB,CLDND2,LOC100129083,NKG7	-2313,58,46104,2955
chr19:55793045-55793804	chr19	+	55793177	55793433	True	NM_032430,NM_012267,NM_001130106	chr19,chr19,chr19	+,-,-	BRSK1,HSPBP1,HSPBP1	2100,-1426,-1426
chr17:80331249-80331847	chr17	+	80331344	80331736	True	NM_003004,NM_018949	chr17,chr17	-,+	SECTM1,UTS2R	-39423,464
chr15:85174857-85175457	chr15	+	85174931	85175409	True	NM_032856,NR_004859,NR_003654	chr15,chr15,chr15	-,+,+	WDR73,SCAND2,SCAND2	22162,-291,-291
chr22:27141425-27143242	chr22	+	27141483	27143115	True	NR_033321,NM_001887	chr22,chr22	+,-	MIAT,CRYBB1	-88088,-127492
chr7:141896034-141897330	chr7	+	141896136	141897328	True	NR_024346,NR_003717	chr7,chr7	-,+	MOXD2P,LOC100124692	49608,-25217
chr2:101924964-101925235	chr2	+	101924969	101925279	True	NM_173647,NM_017546	chr2,chr2	-,+	RNF149,C2orf29	7,-55675
chr12:91348871-91349073	chr12	+	91348903	91349099	True	NM_152638,NR_028138	chr12,chr12	-,+	C12orf12,LOC338758	8,-1246222
chr9:130362653-130363022	chr9	+	130362846	130363072	True	NM_001032221,NM_001035534	chr9,chr9	+,-	STXBP1,FAM129B	11413,-21578
chr4:119831564-119833382	chr4	+	119831755	119833115	True	NM_133477,NM_014822	chr4,chr4	+,-	SYNPO2,SEC24D	-21816,-74429
chr19:36035465-36035775	chr19	+	36035527	36035821	True	NM_032635,NM_198538	chr19,chr19	+,-	TMEM147,SBSN	723,-16274
chrX:15519125-15519814	chrX	+	15519223	15519845	True	NM_003662,NM_001018109,NM_001721,NR_037859,NM_203281	chrX,chrX,chrX,chrX,chrX	-,-,+,-,+	PIR,PIR,BMX,PIR-FIGF,BMX	-7512,-7512,5585,-9791,-374
chr7:143319278-143319546	chr7	+	143319344	143319594	True	NM_178561,NM_001130025,NM_173678	chr7,chr7,chr7	-,+,+	CTAGE6P,FAM115C,FAM115C	135299,-1350,-853
chr7:143319278-143319546	chr7	+	143398533	143398783	False	NM_178561,NM_001130026	chr7,chr7	-,+	CTAGE6P,FAM115C	56110,14155
chr7:143319278-143319546	chr7	-	143532251	143532501	False	NR_015421,NM_001004685	chr7,chr7	-,+	LOC154761,OR2F2	1359,99824
chrX:101518174-101519730	chrX	+	101518311	101519410	True	NM_001012978,NM_022053	chrX,chrX	-,+	BEX5,NXF2	-107325,-16192
chrX:101518174-101519730	chrX	-	101677628	101678727	False	NR_002216,NM_022053	chrX,chrX	+,-	NXF4,NXF2	126165,16176
chrY:21238042-21238298	chrY	+	21238043	21238103	True	NR_002159,NR_001543	chrY,chrY	+,-	TTTY9B,TTTY14	-346326,1249
chr15:33010378-33010635	chr15	+	33010387	33010587	True	NM_013372,NM_001191323,NM_001191322,NR_036650	chr15,chr15,chr15,chr15	+,+,+,-	GREM1,GREM1,GREM1,LOC100288615	-233,-233,-233,-184445
chr2:182545207-182545483	chr2	+	182545225	182545371	True	NM_002500,NM_001130445	chr2,chr2	-,+	NEUROD1,SSFA2	71,211100
chr8:90768560-90769582	chr8	+	90769018	90769522	True	NM_002485,NM_003821	chr8,chr8	-,+	NBN,RIPK2	227427,452
chr1:150850190-150850549	chr1	+	150850388	150850457	True	NM_001197325,NM_001145415,NM_001668,NM_178427	chr1,chr1,chr1,chr1	-,+,-,-	ARNT,SETDB1,ARNT,ARNT	-1144,48357,-1144,-1144
chr17:58195339-58195906	chr17	+	58195685	58195887	True	NM_000717,NR_027408	chr17,chr17	+,-	CA4,LOC653653	31414,-15405
chr17:58195339-58195906	chr17	-	58105380	58105582	False	NM_000717,NR_002924	chr17,chr17	+,-	CA4,DHX40P1	121719,-9044
chr2:182757025-182757384	chr2	+	182757171	182757397	True	NM_006751,NM_002500,NM_001130445	chr2,chr2,chr2	+,-,+	SSFA2,NEUROD1,SSFA2	-750,-211779,-750
chr19:2839426-2839989	chr19	+	2839522	2839757	True	NM_152791,NM_001172775,NM_003021	chr19,chr19,chr19	+,+,-	ZNF555,ZNF555,SGTA	1675,1675,-56168
chr6:49588537-49590020	chr6	+	49588558	49589768	True	NM_001145652,NM_000324	chr6,chr6	+,-	C6orf141,RHAG	-70502,14876
chr21:47703132-47703731	chr21	+	47703305	47703747	True	NM_003906,NM_001006114,NM_058181	chr21,chr21,chr21	-,+,+	MCM3AP,YBEY,YBEY	1539,2519,2519
chr11:134279044-134279884	chr11	+	134279066	134279933	True	NM_018644,NR_033852	chr11,chr11	-,+	B3GAT1,LOC283177	1929,26442
chr20:3751911-3752607	chr20	+	3752236	3752446	True	NM_015417,NM_001039140,NM_004358	chr20,chr20,chr20	-,-,+	SPEF1,C20orf27,CDC25B	9710,-3784,23954
chr20:35200151-35200633	chr20	+	35200260	35200600	True	NM_021809,NM_001199535,NM_001199513,NM_001199514,NM_001199515,NM_032214	chr20,chr20,chr20,chr20,chr20,chr20	+,+,+,+,+,-	TGIF2,TGIF2-C20ORF24,TGIF2,TGIF2,TGIF2,SLA2	1409,2356,1275,1275,2356,74008
chr4:8200922-8201144	chr4	+	8201040	8201136	True	NM_001130088,NM_018986	chr4,chr4	-,+	ABLIM2,SH3TC1	-40481,-31
chr5:172756761-172756967	chr5	+	172756800	172757006	True	NM_013980,NM_003714	chr5,chr5	+,-	BNIP1,STC2	-185406,-294
chr4:24798169-24800049	chr4	+	24798633	24799554	True	NM_001130726,NM_003102	chr4,chr4	-,+	CCDC149,SOD3	115097,-1600
chr7:27182373-27182721	chr7	+	27182629	27182695	True	NR_002795,NM_019102,NM_024014	chr7,chr7,chr7	+,-,-	HOXA11-AS1,HOXA5,HOXA6	42331,642,4723
chr11:1687194-1687574	chr11	+	1687194	1687254	True	NR_026642,NR_026643	chr11,chr11	-,+	FAM99B,FAM99A	19655,-416
chr11:1687194-1687574	chr11	-	1706407	1706467	False	NR_026642,NM_001012416	chr11,chr11	-,+	FAM99B,KRTAP5-6	442,11957
chr4:187810211-187810426	chr4	+	187810219	187810425	True	NM_000128,NM_005245	chr4,chr4	+,-	F11,FAT1	-623152,-165232
chr2:65217739-65218153	chr2	+	65217743	65218193	True	NR_036586,NM_003038,NM_001193493	chr2,chr2,chr2	-,+,+	LOC400958,SLC1A4,SLC1A4	-58162,-1299,-2215
chr17:58499220-58499936	chr17	+	58499231	58499851	True	NM_181707,NM_032582	chr17,chr17	+,-	C17orf64,USP32	13,-29645
chr7:103968015-103968650	chr7	+	103968014	103968648	True	NM_199000,NM_181747	chr7,chr7	+,-	LHFPL3,ORC5	455,-119519
chr8:97173590-97173846	chr8	+	97173648	97173848	True	NM_001001557,NM_014754	chr8,chr8	-,+	GDF6,PTDSS1	-628,100318
chr2:48808644-48809301	chr2	+	48808724	48809339	True	NM_001198594,NM_000233	chr2,chr2	+,-	STON1-GTF2A1L,LHCGR	-1058,173591
chr8:145014478-145014710	chr8	+	145014644	145014704	True	NM_000837,NR_030383,NM_201384,NM_201381,NM_201383,NM_201382	chr8,chr8,chr8,chr8,chr8,chr8	+,-,-,-,-,-	GRINA,MIR661,PLEC,PLEC,PLEC,PLEC	49521,4793,-886,4251,2038,3456
chr19:19316338-19316552	chr19	+	19316442	19316512	True	NM_176880,NM_004386	chr19,chr19	-,+	NR2C2AP,NCAN	-2204,6269
chr17:34080263-34080736	chr17	+	34080291	34080718	True	NM_145272,NM_139285	chr17,chr17	+,-	C17orf50,GAS2L2	7197,-394
chr6:99961012-99962218	chr6	+	99961042	99962262	True	NM_001080481,NM_001195131	chr6,chr6	-,+	USP45,LOC100130890	1045,6607
chr17:6682120-6683939	chr17	+	6682293	6683927	True	NM_053285,NM_153230	chr17,chr17	-,+	TEKT1,FBXO39	51183,-2792
chr6:33560232-33560927	chr6	+	33560313	33560971	True	NR_027908,NR_028361	chr6,chr6	-,+	C6orf227,GGNBP1	194,-8888
chr14:102783558-102784257	chr14	+	102783573	102784283	True	NM_014226,NM_018335	chr14,chr14	-,+	RAGE,ZNF839	-12042,1812
chr10:27230339-27230622	chr10	+	27230440	27230652	True	NR_026795,NM_001172303	chr10,chr10	-,+	NCRNA00202,MASTL	328,213100
chr2:210865710-210866532	chr2	+	210865842	210866579	True	NM_152519,NM_006916,NM_199229	chr2,chr2,chr2	-,+,+	C2orf67,RPE,RPE	169522,772,801
chr4:74124363-74124650	chr4	+	74124464	74124688	True	NM_032217,NM_000477,NM_198889	chr4,chr4,chr4	-,+,-	ANKRD17,ALB,ANKRD17	-22,145283,-22
chr13:22024407-22025848	chr13	+	22024435	22025575	True	NM_153251,NM_002010	chr13,chr13	-,+	ZDHHC20,FGF9	7991,219639
chr22:38351265-38351848	chr22	+	38351555	38351625	True	NM_032561,NM_021974	chr22,chr22	-,+	C22orf23,POLR2F	-1952,-1937
chr20:57594122-57596121	chr20	+	57594180	57596125	True	NM_001336,NM_030773,NM_006886	chr20,chr20,chr20	-,+,-	CTSZ,TUBB1,ATP5E	-11871,78,11325
chr17:60501454-60501730	chr7	+	128117110	128117238	False	NM_183243,NM_018396	chr7,chr7	-,+	IMPDH1,METTL2B	-67074,-378
chr17:60501454-60501730	chr17	+	60501554	60501722	True	NR_027486,NM_181725	chr17,chr17	-,+	TBC1D3P2,METTL2A	-148538,-359
chr6:11382593-11384533	chr6	+	11382661	11384479	True	NM_001142393,NM_001100829	chr6,chr6	-,+	NEDD9,TMEM170B	-80,154031
chr12:52404420-52404839	chr12	+	52404478	52404866	True	NM_181711,NM_001013690	chr12,chr12	+,-	GRASP,FIGNL2	-3788,-178777
chr5:176319404-176320348	chr5	+	176319709	176320393	True	NM_133369,NM_002115	chr5,chr5	+,-	UNC5A,HK3	-82200,5990
chr12:56077133-56078505	chr12	+	56077339	56078429	True	NM_001144996,NM_152637	chr12,chr12	-,+	ITGA7,METTL7B	23315,-2060
chr22:21396763-21398473	chr22	+	21396874	21398285	True	NR_027006,NR_002829	chr22,chr22	+,-	LOC400891,P2RX6P	1963,303
chr9:96338060-96338349	chr9	+	96338243	96338313	True	NM_198841,NM_005392	chr9,chr9	-,+	FAM120AOS,PHF2	-122369,595
chr5:140580502-140580961	chr5	+	140580501	140580687	True	NM_018932,NM_031947,NM_018930,NM_018931	chr5,chr5,chr5,chr5	+,-,+,+	PCDHB12,SLC25A2,PCDHB10,PCDHB11	7603,102975,-8601,-1205
chr3:196433425-196434032	chr3	+	196433454	196433834	True	NM_017861,NM_032898,NM_001166304	chr3,chr3,chr3	+,-,+	PIGX,C3orf34,PIGX	5410,5352,5410
chr3:169482641-169482846	chr3	+	169482674	169482884	True	NR_001566,NM_001185118,NR_033703,NR_033702,NM_018657,NM_032487,NM_001185119	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,+,+,+,-,+	TERC,MYNN,MYNN,MYNN,MYNN,ARPM1,MYNN	14,7968,7968,7968,7968,4849,9168
chr15:75043537-75044492	chr15	+	75043610	75044277	True	NM_000499,NM_000761	chr15,chr15	-,+	CYP1A1,CYP1A2	-25733,-2477
chr12:118454424-118454778	chr12	+	118454471	118454623	True	NM_018639,NM_181578,NM_007370,NM_001130113,NM_001130112	chr12,chr12,chr12,chr12,chr12	-,+,+,+,+	WSB2,RFC5,RFC5,RFC5,RFC5	44378,-14,-14,-14,-14
chr10:102748869-102749076	chr10	+	102748894	102749102	True	NM_001163812,NM_001163813,NM_001163814,NM_032112,NM_021830,NM_176794,NM_176793,NM_176792,NM_032429	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,-,+,-,-,-,+	C10orf2,C10orf2,C10orf2,MRPL43,C10orf2,MRPL43,MRPL43,MRPL43,LZTS2	-1652,-1652,-1652,-1622,-1652,-1622,-1622,-1622,7761
chrX:48554773-48555002	chrX	+	48554787	48554891	True	NM_013271,NM_003173	chrX,chrX	-,+	PCSK1N,SUV39H1	139119,239
chr1:84977523-84978909	chr1	+	84977726	84978519	True	NR_036561,NM_005274	chr1,chr1	+,-	SPATA1,GNG5	-5814,-5464
chr2:101923934-101924577	chr2	+	101924001	101924405	True	NM_173647,NM_017546	chr2,chr2	-,+	RNF149,C2orf29	823,-54714
chr2:219698841-219700743	chr2	+	219698996	219700592	True	NM_017431,NM_006522	chr2,chr2	-,+	PRKAG3,WNT6	-2484,23953
chr19:13002269-13002497	chr19	+	13002273	13002545	True	NM_013976,NM_001375,NM_000159,NM_006563	chr19,chr19,chr19,chr19	+,-,+,-	GCDH,DNASE2,GCDH,KLF1	-350,-9938,-350,-4256
chrX:30231686-30233573	chrX	+	30231701	30233593	True	NM_000475,NM_002364	chrX,chrX	-,+	NR0B1,MAGEB2	93952,81
chr12:66582459-66582854	chr12	+	66582666	66582732	True	NM_016056,NM_007199,NM_001142523	chr12,chr12,chr12	-,+,+	TMBIM4,IRAK3,IRAK3	-18859,245,245
chr17:21194502-21194809	chr17	+	21194677	21194747	True	NM_152914,NM_145109,NM_002756	chr17,chr17,chr17	-,+,+	C17orf103,MAP2K3,MAP2K3	-38099,-6760,-3380
chr1:161232146-161233117	chr1	+	161232244	161232948	True	NM_001077469,NM_001102566	chr1,chr1	-,+	NR1I3,PCP4L1	-24244,-3779
chr1:28656092-28656500	chr1	+	28656110	28656493	True	NM_014280,NM_017638,NM_001127350	chr1,chr1,chr1	-,+,+	DNAJC8,MED18,MED18	-96568,-648,-648
chr19:45757522-45757783	chr19	+	45757570	45757734	True	NM_031417,NM_001199867,NM_138568	chr19,chr19,chr19	+,+,-	MARK4,MARK4,EXOC3L2	-3105,-3105,-20101
chr5:169394478-169395857	chr5	+	169394560	169395736	True	NM_012188,NM_001129891	chr5,chr5	+,-	FOXI1,FAM196B	137180,12058
chr20:45038974-45039381	chr20	+	45038973	45039397	True	NM_152854,NM_133171,NM_182764	chr20,chr20,chr20	+,-,-	CD40,ELMO2,ELMO2	-292125,-3702,-3702
chr22:23411010-23411947	chr22	+	23411142	23411994	True	NM_002073,NM_014433	chr22,chr22	+,-	GNAZ,RTDR1	674,72297
chr15:85259426-85259697	chr15	+	85259476	85259746	True	NM_014630,NM_014300	chr15,chr15	+,-	ZNF592,SEC11A	32071,-22
chr5:176732500-176732933	chr5	+	176732545	176732879	True	NM_130781,NM_001142935,NM_013237,NM_031300,NM_001031677	chr5,chr5,chr5,chr5,chr5	-,-,+,-,-	RAB24,MXD3,PRELID1,MXD3,RAB24	-1801,6463,-1761,6463,-1801
chr7:1125367-1125593	chr7	+	1125487	1125639	True	NM_001098201,NM_001134395,NM_001505,NM_001039966	chr7,chr7,chr7,chr7	+,-,+,+	GPER,C7orf50,GPER,GPER	2083,52304,803,803
chr8:36637231-36637983	chr8	+	36637333	36637900	True	NM_001031836,NR_003671	chr8,chr8	+,-	KCNU1,LOC728024	3941,967723
chr5:35043954-35044520	chr5	+	35044084	35044544	True	NM_194283,NM_031900	chr5,chr5	+,-	DNAJC21,AGXT2	-114448,3746
chr21:33650213-33650917	chr21	+	33650213	33650773	True	NM_178817,NM_018944	chr21,chr21	+,-	MRAP,MIS18A	13350,654
chr22:25424832-25425049	chr22	+	25424837	25425063	True	NM_001001663,NM_001145206	chr22,chr22	-,+	TMEM211,KIAA1671	-89523,-947
chr6:4893809-4894240	chr6	+	4894035	4894294	True	NM_001143971,NM_006638	chr6,chr6	+,-	CDYL,RPP40	-3860,110034
chr16:58496702-58497249	chr16	+	58496702	58497159	True	NM_001130487,NR_002978,NM_020465,NM_022910	chr16,chr16,chr16,chr16	+,-,+,+	NDRG4,SNORA46,NDRG4,NDRG4	834,85428,389,1605
chr3:193949772-193950172	chr3	+	193949879	193950223	True	NR_024480,NM_005524	chr3,chr3	-,+	LOC100131551,HES1	80422,-95999
chr12:56110588-56111235	chr12	+	56110588	56110975	True	NM_002905,NM_002206,NM_001144996,NM_001144997,NR_037656,NR_037655,NR_037657,NM_001487,NR_037658,NM_001199771	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,-,-,-,+,+,+,+,+,+	RDH5,ITGA7,ITGA7,ITGA7,BLOC1S1,BLOC1S1,BLOC1S1,BLOC1S1,BLOC1S1-RDH5,RDH5	3175,-8902,-8902,-4499,-570,-828,-570,-828,-828,3175
chr7:72500827-72502042	chr7	+	72501701	72501765	True	NR_003614,NR_003664	chr7,chr7	+,-	PMS2L2,SPDYE8P	-25072,-1392
chr7:72500827-72502042	chr7	-	74935076	74935140	False	NR_003614,NR_003664	chr7,chr7	-,+	PMS2L2,SPDYE8P	53125,1392
chr7:72500827-72502042	chr7	-	74963101	74963165	False	NR_003614,NR_003664	chr7,chr7	-,+	PMS2L2,SPDYE8P	25100,1394
chr4:2756986-2757476	chr4	+	2756985	2757249	True	NM_001122681,NM_001161527,NM_024309	chr4,chr4,chr4	+,-,-	SH3BP2,TNIP2,TNIP2	37500,553,904
chr13:20101165-20102241	chr13	+	20101300	20102231	True	NM_017520,NM_199254,NM_001141968,NM_130785	chr13,chr13,chr13,chr13	+,-,-,-	MPHOSPH8,TPTE2,TPTE2,TPTE2	105556,8723,8723,8723
chr2:61696196-61697101	chr2	+	61696404	61697145	True	NM_014709,NM_152392	chr2,chr2	-,+	USP34,AHSA2	755,-291911
chr6:30904021-30905245	chr6_qbl_hap6	+	2197121	2198081	False	NM_205854,NM_080870	chr6_qbl_hap6,chr6_qbl_hap6	-,+	SFTA2,DPCR1	-4198,3668
chr6:30904021-30905245	chr6_mcf_hap5	+	2286089	2287049	False	NM_205854,NM_080870	chr6_mcf_hap5,chr6_mcf_hap5	-,+	SFTA2,DPCR1	-4198,3668
chr6:30904021-30905245	chr6_cox_hap2	+	2416060	2417020	False	NM_205854,NM_080870	chr6_cox_hap2,chr6_cox_hap2	-,+	SFTA2,DPCR1	-4185,3669
chr6:30904021-30905245	chr6	+	30904149	30905109	True	NM_205854,NM_080870	chr6,chr6	-,+	SFTA2,DPCR1	-4197,3667
chr6:30904021-30905245	chr6_dbb_hap3	+	2198264	2199224	False	NM_205854,NM_080870	chr6_dbb_hap3,chr6_dbb_hap3	-,+	SFTA2,DPCR1	-4202,3668
chr2:196919128-196920888	chr2	+	196919321	196920783	True	NM_020342,NM_018897	chr2,chr2	+,-	SLC39A10,DNAH7	-397520,12816
chr5:148521612-148521888	chr5	+	148521619	148521867	True	NM_024577,NM_014945	chr5,chr5	-,+	SH3TC2,ABLIM3	-78882,-616
chr15:81436791-81437259	chr15	+	81437142	81437284	True	NM_015154,NM_173528	chr15,chr15	-,+	MESDC2,C15orf26	-154937,-10549
chr13:103260269-103261838	chr13	+	103260380	103261727	True	NM_003291,NM_001010977	chr13,chr13	+,-	TPP2,METTL21C	-11153,85177
chr1:200840948-200841569	chr1	+	200840985	200841605	True	NM_005298,NM_017596	chr1,chr1	+,-	GPR25,KIF21B	560,151273
chr9:116636262-116636714	chr9	+	116636275	116636539	True	NM_133374,NM_001633	chr9,chr9	+,-	ZNF618,AMBP	2022,204263
chr10:38735803-38736752	chr10	+	38735977	38736053	True	NR_027269,NR_024497	chr10,chr10	-,+	SEPT7L,LOC399744	-44197,-18960
chrX:52985367-52986389	chrX	+	52985419	52986357	True	NM_014138,NM_001099684	chrX,chrX	-,-	FAM156A,FAM156B	-63,38
chrX:52985367-52986389	chrX	-	52927680	52928618	False	NM_014138,NM_133179,NM_001099684	chrX,chrX,chrX	+,-,+	FAM156A,XAGE3,FAM156B	63,-30561,-38
chr8:179715-180645	chr8	+	179786	180016	True	NM_001042416,NM_001042415,NR_003572,NM_173539	chr8,chr8,chr8,chr8	+,+,-,+	ZNF596,ZNF596,RPL23AP53,ZNF596	2367,2367,2352,2183
chr5:150460887-150461316	chr5	+	150461070	150461251	True	NM_002084,NM_006058	chr5,chr5	+,-	GPX3,TNIP1	-61127,-73
chr22:42335717-42335967	chr22	+	42335721	42335966	True	NM_024053,NM_001002876,NM_001110215,NR_024355	chr22,chr22,chr22,chr22	-,-,-,+	CENPM,CENPM,CENPM,LOC339674	7232,7232,307,12224
chr11:65033241-65035135	chr11	+	65033262	65035072	True	NM_002689,NM_001077241	chr11,chr11	+,-	POLA2,SLC25A45	-3881,115120
chr16:34622473-34622869	chr16	+	34622625	34622788	True	NR_026980,NR_027079	chr16,chr16	-,+	LOC146481,LOC283914	92230,-24774
chr17:45899269-45900427	chr17	+	45899405	45900415	True	NM_145798,NM_033413,NM_145255,NR_037575,NM_148887	chr17,chr17,chr17,chr17,chr17	-,+,-,-,-	OSBPL7,LRRC46,MRPL10,MRPL10,MRPL10	-258,8577,8542,8542,8542
chr14:50859362-50859693	chr14	+	50859430	50859708	True	NR_033761,NM_004196	chr14,chr14	+,-	ATP5S,CDKL1	-80434,2959
chr4:121793228-121794623	chr4	+	121793357	121794679	True	NM_018699,NR_024365	chr4,chr4	-,+	PRDM5,LOC100192379	49391,891060
chr2:33698942-33699528	chr2	+	33699019	33699383	True	NM_015475,NM_001139488	chr2,chr2	-,+	FAM98A,RASGRP3	125031,1937
chr17:42463323-42463557	chr17	+	42463348	42463554	True	NM_000419,NM_002087	chr17,chr17	-,+	ITGA2B,GRN	3369,-40908
chr14:31343807-31344032	chr14	+	31343845	31343977	True	NM_004086,NM_001135058,NR_030354	chr14,chr14,chr14	+,+,-	COCH,COCH,MIR624	-155,-155,140021
chr21:48060512-48061458	chr21	+	48060700	48061276	True	NM_006272,NM_001535	chr21,chr21	-,+	S100B,PRMT2	-35665,-5237
chr4:9532178-9532671	chr4	+	9532178	9532417	True	NR_031688,NM_001040448	chr4,chr4	-,+	MIR548I2,DEFB131	25573,-85969
chr10:94622196-94623390	chr10	+	94622382	94623155	True	NM_004969,NM_019053	chr10,chr10	-,+	IDE,EXOC6	-288530,-14219
chr10:112415914-112416865	chr10	+	112416309	112416589	True	NR_026932,NM_001134363	chr10,chr10	-,+	LOC282997,RBM20	214123,-12206
chr19:36025753-36026582	chr19	+	36025859	36026269	True	NM_001166035,NM_001166034,NM_014364,NM_198538	chr19,chr19,chr19,chr19	-,-,+,-	SBSN,SBSN,GAPDHS,SBSN	-6606,-6606,-1596,-6606
chr17:33466944-33467902	chr17	+	33466947	33467951	True	NM_173167,NM_001014445,NM_001033576,NM_018096	chr17,chr17,chr17,chr17	+,-,+,-	UNC45B,NLE1,UNC45B,NLE1	6884,1421,6884,1421
chr4:1684826-1685503	chr4	+	1684840	1685434	True	NM_001013622,NM_001174070,NM_006342	chr4,chr4,chr4	-,-,+	FAM53A,FAM53A,TACC3	334,604,37831
chr9:97489476-97490780	chr9	+	97489529	97490779	True	NM_001127628,NM_032823,NM_001193331	chr9,chr9,chr9	-,+,+	FBP1,C9orf3,C9orf3	-86998,-629,-629
chr15:78238414-78238810	chr15	+	78238427	78238487	True	NM_001101404,NR_027024	chr15,chr15	+,-	SH2D7,LOC645752	146439,-19239
chr4:9638855-9639747	chr4	+	9639387	9639703	True	NR_031688,NM_000798	chr4,chr4	-,+	MIR548I2,DRD5	-81450,143554
chr3:8695554-8696309	chr3	+	8695610	8696314	True	NM_033337,NM_015931	chr3,chr3	+,-	CAV3,C3orf32	79171,-1873
chr2:10185652-10186836	chr2	+	10185687	10186697	True	NM_001177716,NM_003597,NM_001037160,NM_001177718	chr2,chr2,chr2,chr2	+,+,-,+	KLF11,KLF11,CYS1,KLF11	-1782,-2056,33891,-1366
chrX:70799584-70799802	chrX	+	70799584	70799850	True	NM_052957,NM_001142797	chrX,chrX	+,-	ACRC,CXCR3	-1761,38567
chr1:17090527-17090907	chr1	+	17090646	17090870	True	NR_002729,NR_037446	chr1,chr1	-,+	MST1P9,MIR3675	155,-82947
chr1:17090527-17090907	chr1	-	234953909	234954133	False	NM_182972,NR_033927	chr1,chr1	-,+	IRF2BP2,NCRNA00184	-208638,-188903
chr21:35010609-35012222	chr21	+	35010827	35011873	True	NM_145858,NM_003024,NM_001001132	chr21,chr21,chr21	-,+,+	CRYZL1,ITSN1,ITSN1	2337,2910,2910
chr3:128185515-128186027	chr3	+	128185514	128185926	True	NM_153330,NR_037890	chr3,chr3	-,+	DNAJB8,LOC285224	215,-3128
chr3:49978434-49978927	chr3	+	49978436	49978822	True	NM_001167582,NM_005777,NM_032355	chr3,chr3,chr3	+,+,-	RBM6,RBM6,MON1A	-1010,-1010,-10991
chr14:20931429-20931909	chr14	+	20931717	20931790	True	NM_001641,NM_001100814,NM_017807,NM_080648,NM_080649,NM_000270,NM_144568	chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,-,-,+,+,+,-	APEX1,TMEM55B,OSGEP,APEX1,APEX1,PNP,TMEM55B	-8491,-2080,-8450,-8491,-8491,5747,-2080
chr3:40494602-40494856	chr3	+	40494617	40494903	True	NR_033965,NM_001034996,NM_003973	chr3,chr3,chr3	-,+,+	FLJ33065,RPL14,RPL14	-143428,3926,3897
chr8:94926683-94927100	chr8	+	94926812	94926984	True	NM_001161780,NM_001161779,NM_001161778,NM_001161781,NM_203390,NM_018444	chr8,chr8,chr8,chr8,chr8,chr8	+,+,+,+,-,+	PDP1,PDP1,PDP1,PDP1,RBM12B,PDP1	2177,2190,3007,2294,-173588,2098
chr14:20802107-20802575	chr14	+	20802175	20802330	True	NM_182851,NM_182852,NM_001042618,NR_002312,NM_182849,NR_003693,NM_005484,NM_021178	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	-,-,+,-,-,-,+,-	CCNB1IP1,CCNB1IP1,PARP2,RPPH1,CCNB1IP1,SNORD126,PARP2,CCNB1IP1	-4639,-4642,9442,9297,-718,-7477,9442,-718
chr16:28566005-28566651	chr16	+	28566005	28566275	True	NM_138414,NM_012385	chr16,chr16	+,-	CCDC101,NUPR1	-807,-15510
chr1:36771360-36771571	chr1	+	36771366	36771594	True	NM_024676,NM_001162530,NM_018166	chr1,chr1,chr1	+,+,-	SH3D21,SH3D21,FAM176B	1113,399,18211
chr22:21088539-21089067	chr22	+	21088763	21089098	True	NM_002650,NR_026815	chr22,chr22	-,+	PI4KA,TMEM191A	-17,-33412
chr22:21088539-21089067	chr22	+	20398680	20398889	False	NR_003563,NR_026919	chr22,chr22	-,+	PI4KAP1,LOC150197	15,-204876
chr22:21088539-21089067	chr22	+	21842656	21842865	False	NM_015094,NR_003700	chr22,chr22	+,-	HIC2,PI4KAP2	-71014,28965
chr9:44761942-44762181	chr9	+	44761951	44762175	True	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	228060,-1131221
chr9:44761942-44762181	chr9	-	47166209	47166269	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-3535479,-478694
chr9:44761942-44762181	chr9	+	67683189	67683249	False	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	110990,243511
chr19:462555-462893	chr19	+	462573	462818	True	NM_012435,NM_130760	chr19,chr19	-,+	SHC2,MADCAM1	-1577,33671
chr22:41637180-41637867	chr22	+	41637245	41637739	True	NM_138481,NM_031488	chr22,chr22	-,+	CHADL,L3MBTL2	-310,-35983
chr20:49575079-49575364	chr20	+	49575083	49575375	True	NM_003859,NM_014484	chr20,chr20	-,+	DPM1,MOCS3	-23,13
chr7:38924832-38925659	chr7	+	38924957	38925595	True	NM_014396,NM_001166018	chr7,chr7	-,+	VPS41,POU6F2	23262,92013
chr20:61734506-61735301	chr20	+	61734558	61735318	True	NR_003245,NR_003244	chr20,chr20	-,+	HAR1B,HAR1A	-887,-1965
chr14:65451348-65452036	chr14	+	65451509	65452057	True	NM_002028,NM_198686	chr14,chr14	+,-	FNTB,RAB15	1449,-12634
chr17:56610648-56611002	chr17	+	56610683	56611015	True	NM_001198713,NM_002876,NM_004574,NM_080415,NM_080416,NR_037156,NR_037155	chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,-,-,-,-,-	SEPT4,RAD51C,SEPT4,SEPT4,SEPT4,SEPT4,SEPT4	7214,158947,-3905,-1240,-1240,-5309,-3905
chr5:149376374-149376844	chr5	+	149376373	149376765	True	NM_014983,NM_030953	chr5,chr5	+,-	HMGXB3,TIGD6	3403,3502
chr12:123461341-123461885	chr12	+	123461731	123461871	True	NM_203444,NM_024623,NM_018694,NM_001002251,NM_001002252,NM_016638	chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,+,+,+	ABCB9,OGFOD2,ARL6IP4,ARL6IP4,ARL6IP4,ARL6IP4	-1979,-2428,3008,3008,3008,3008
chr7:65445411-65446042	chr7	+	65445506	65445974	True	NM_000181,NM_000048	chr7,chr7	-,+	GUSB,ASL	1377,94801
chr7:103061987-103063641	chr7	+	103062047	103063384	True	NM_206883,NM_002803	chr7,chr7	-,+	SLC26A5,PSMC2	23297,-74134
chr15:45406584-45406791	chr15	+	45406615	45406835	True	NM_207581,NM_014080	chr15,chr15	+,-	DUOXA2,DUOX2	-143,-256
chr17:8215044-8215668	chr17	+	8215105	8215361	True	NM_025014,NM_201520,NM_173728	chr17,chr17,chr17	+,-,+	ARHGEF15,SLC25A35,ARHGEF15	-1016,-16935,-1600
chr1:28239953-28240617	chr1	+	28240287	28240603	True	NM_001009568,NM_002946	chr1,chr1	+,-	SMPDL3B,RPA2	20900,683
chr10:6370291-6371481	chr10	+	6370402	6371378	True	NM_004566,NM_006257	chr10,chr10	+,-	PFKFB3,PRKCQ	-125615,250910
chr14:104096388-104097458	chr14	+	104096436	104097337	True	NM_005552,NM_182923,NM_001130107,NM_001015048	chr14,chr14,chr14,chr14	+,+,+,-	KLC1,KLC1,KLC1,BAG5	-962,-962,-962,-67285
chr4:110618907-110619271	chr4	+	110618978	110619290	True	NM_018983,NM_001226,NM_032992	chr4,chr4,chr4	+,-,-	GAR1,CASP6,CASP6	117375,5389,5389
chr16:19429310-19430856	chr16	+	19429450	19430568	True	NM_001105249,NM_001105248,NM_016641	chr16,chr16,chr16	+,+,-	TMC5,TMC5,GDE1	-7444,-7444,102933
chr1:149985105-149985685	chr1	+	149985122	149985549	True	NM_007259,NM_020205	chr1,chr1	+,-	VPS45,OTUD7B	53792,-2436
chr3:10068223-10068467	chr3	+	10068303	10068495	True	NR_002786,NM_033084,NM_001018115	chr3,chr3,chr3	-,+,+	CIDECP,FANCD2,FANCD2	-483,-241,-241
chr7:74510130-74511169	chr7	+	74510152	74511081	True	NM_030798,NM_001003795	chr7,chr7	-,+	WBSCR16,GTF2IRD2B	-20453,-1856
chr7:74510130-74511169	chr7	-	74265170	74266099	False	NM_173537,NR_027775	chr7,chr7	-,+	GTF2IRD2,PMS2P5	1792,40794
chr17:40809557-40809922	chr17	+	40809717	40809945	True	NM_024927,NM_016437	chr17,chr17	-,+	PLEKHH3,TUBG2	19153,1320
chr4:121992121-121992423	chr4	+	121992146	121992384	True	NM_024574,NR_024365	chr4,chr4	-,+	C4orf31,LOC100192379	1339,693355
chr10:51564830-51565312	chr10	+	51564951	51565307	True	NM_005437,NM_006327,NM_001145263,NM_001145261,NM_001145260	chr10,chr10,chr10,chr10,chr10	+,-,+,+,+	NCOA4,TIMM23,NCOA4,NCOA4,NCOA4	7056,58079,32,32,32
chr7:33136539-33137525	chr7	+	33136734	33137146	True	NM_001033604,NM_203288	chr7,chr7	+,-	BBS9,RP9	32005,11906
chr2:120772825-120773381	chr2	+	120773057	120773419	True	NM_020909,NM_001184937,NM_001184938,NM_001184939,NR_000034	chr2,chr2,chr2,chr2,chr2	+,+,+,+,-	EPB41L5,EPB41L5,EPB41L5,EPB41L5,TMEM185B	-2505,-2505,-2324,-2505,207615
chr2:27852180-27853076	chr2	+	27852210	27852800	True	NM_001145047,NR_026735,NM_001142683,NM_007266,NM_024584,NM_001145049,NM_001145048	chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,+,-,+,-,+,+	GPN1,GPN1,CCDC121,GPN1,CCDC121,GPN1,GPN1	-746,-398,-465,-398,-312,-746,-746
chr1:25113-26792	chr12	-	77705	77755	False	NR_028269,NR_026823	chr12,chr12	+,-	LOC100288778,FAM138D	10228,71707
chr1:25113-26792	chr19	+	67149	67807	False	NR_026820,NR_026818,NM_001005240,NR_033266	chr19,chr19,chr19,chr19	-,-,+,-	FAM138F,FAM138A,OR4F17,WASH5P	9933,9933,42871,3209
chr1:25113-26792	chr15	-	102504963	102505621	True	NR_026819,NR_034090	chr15,chr15	+,-	FAM138E,DDX11L9	-9926,13731
chr1:25113-26792	chr1	+	25541	26199	False	NM_001005221,NR_028325	chr1,chr1	-,+	OR4F29,LOC100132062	595885,297692
chr9:707417-709323	chr9	+	708349	709310	True	NM_152569,NM_153186	chr9,chr9	-,+	C9orf66,KANK1	-492456,-1504
chr11:18234410-18235456	chr11	+	18234634	18235475	True	NR_026564,NR_026541,NR_026563,NM_006512	chr11,chr11,chr11,chr11	+,+,+,-	LOC494141,LOC494141,LOC494141,SAA4	-4008,-4008,-3861,22971
chr1:154909507-154909861	chr1	+	154909604	154909886	True	NM_001826,NM_006556	chr1,chr1	+,-	CKS1B,PMVK	37231,-120
chr19:39738552-39738857	chr19	+	39738624	39738898	True	NM_172139,NM_172138	chr19,chr19	-,+	IL28B,IL28A	-3013,20258
chr12:3069418-3070094	chr12	+	3069514	3070030	True	NM_003213,NM_202003,NM_201443,NM_201441	chr12,chr12,chr12,chr12	+,-,+,+	TEAD4,FOXM1,TEAD4,TEAD4	-1087,-83211,-817,-1087
chr21:41249477-41250211	chr21	+	41249701	41250161	True	NR_026543,NM_006198	chr21,chr21	-,+	C21orf88,PCP4	-264952,-10411
chr17:42788512-42789036	chr17	+	42788831	42788909	True	NM_145663,NM_144609,NM_025104,NR_036623	chr17,chr17,chr17,chr17	+,-,+,+	DBF4B,CCDC43,DBF4B,DBF4B	-2906,-21666,-2906,-2906
chr5:127872039-127872737	chr5	+	127872185	127872655	True	NM_014031,NM_001999	chr5,chr5	+,-	SLC27A6,FBN2	428554,1130
chr22:38839432-38839713	chr22	+	38839544	38839632	True	NM_016657,NM_004981	chr22,chr22	+,-	KDELR3,KCNJ4	24450,451
chr6:137818359-137818578	chr6	+	137818377	137818581	True	NM_006290,NM_175747	chr6,chr6	+,-	TNFAIP3,OLIG3	369999,-2846
chr3:148941449-148942006	chr3	+	148941567	148941959	True	NM_000096,NM_032383	chr3,chr3	-,+	CP,HPS3	-1735,-94247
chrX:135629964-135631152	chrX	+	135630070	135631100	True	NM_004840,NR_030631	chrX,chrX	-,+	ARHGEF6,MIR934	232453,1936
chr19:54024838-54025862	chr19	+	54025078	54025851	True	NM_018555,NR_002938	chr19,chr19	+,-	ZNF331,LOC284379	-952,80951
chr11:79148951-79149494	chr11	+	79148972	79149536	True	NM_001098816,NM_020798	chr11,chr11	-,+	ODZ4,USP35	2209,-1249165
chr3:197028073-197028673	chr3	+	197028254	197028573	True	NM_001204386,NM_004087,NR_024388,NM_001098424	chr3,chr3,chr3,chr3	-,-,+,-	DLG1,DLG1,LOC152217,DLG1	-2807,-2807,-358812,-2807
chr5:95770267-95771377	chr5	+	95770339	95771270	True	NM_001190442,NM_001177875,NM_000439	chr5,chr5,chr5	+,-,-	CAST,PCSK1,PCSK1	226470,-2476,-1354
chr1:235812119-235812324	chr1	+	235812118	235812304	True	NM_003193,NM_001098722,NM_001098721,NM_004485	chr1,chr1,chr1,chr1	+,-,-,-	TBCE,GNG4,GNG4,GNG4	-281444,1039,1800,1800
chr9:140447211-140448250	chr9	+	140447378	140448082	True	NM_032477,NM_152286,NM_001098537	chr9,chr9,chr9	+,-,-	MRPL41,PNPLA7,PNPLA7	-1130,-2392,-2392
chr16:82661548-82661875	chr16	+	82661566	82661858	True	NM_005792,NM_001257	chr16,chr16	-,+	MPHOSPH6,CDH13	-457737,-1039
chr12:109276818-109278215	chr12	+	109276857	109278062	True	NM_001917,NM_001161330	chr12,chr12	+,-	DAO,SSH1	-3051,-25498
chr8:38855023-38855357	chr8	+	38855083	38855387	True	NM_031940,NM_003816,NM_078473,NR_027638,NR_027639,NM_001024380,NM_001024381,NR_027878	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,+,-,+,+,-,-,+	TM2D2,ADAM9,TM2D2,ADAM9,ADAM9,TM2D2,TM2D2,ADAM9	-1042,-629,-1042,-629,-629,-1042,-1042,-629
chr12:4700349-4701289	chr12	+	4700359	4701311	True	NM_006422,NM_020374,NM_003845	chr12,chr12,chr12	-,-,+	AKAP3,C12orf4,DYRK4	53088,-52722,-1166
chr5:92916980-92917239	chr5	+	92917143	92917265	True	NR_021490,NR_021491,NM_005654	chr5,chr5,chr5	-,-,+	FLJ42709,FLJ42709,NR2F1	-140,-190,1777
chr16:21722043-21722880	chr16	+	21722352	21722801	True	NM_170664,NM_005849	chr16,chr16	+,-	OTOA,IGSF6	-6127,-58380
chr15:34515881-34516360	chr15	+	34515980	34516350	True	NM_024713,NM_016454	chr15,chr15	-,+	C15orf29,TMEM85	-13683,894
chr2:27069537-27069762	chr2	+	27069652	27069786	True	NM_020134,NM_001029881	chr2,chr2	+,-	DPYSL5,CIB4	1182,-205441
chr2:112644590-112645929	chr2	+	112644955	112645761	True	NM_022662,NM_006343	chr2,chr2	-,+	ANAPC1,MERTK	-3214,10429
chr16:12997648-12998009	chr16	+	12997703	12997885	True	NM_001145205,NM_001145204,NM_018340	chr16,chr16,chr16	+,+,-	SHISA9,SHISA9,CPPED1	-2283,-2283,-99959
chr7:33139833-33141799	chr7	+	33140086	33141804	True	NM_001033604,NM_203288	chr7,chr7	+,-	BBS9,RP9	27347,7249
chr8:144622625-144622832	chr8	+	144622678	144622798	True	NM_001166237,NM_015117	chr8,chr8	+,-	GSDMD,ZC3H3	12758,872
chr1:27505204-27506702	chr1	+	27506023	27506458	True	NM_015023,NM_003047	chr1,chr1	+,-	WDTC1,SLC9A1	54548,-24572
chr3:133719030-133720303	chr3	+	133719295	133720303	True	NM_021203,NM_005630	chr3,chr3	+,-	SRPRB,SLCO2A1	-216470,28667
chr16:89984805-89985038	chr16	+	89984827	89984961	True	NM_002386,NM_145039,NM_001197181,NM_006086	chr16,chr16,chr16,chr16	+,-,+,+	MC1R,CENPBD1,TUBB3,TUBB3	-592,54329,3455,4725
chrX:47344227-47346041	chrX	+	47344460	47345277	True	NM_001654,NM_153380,NM_007130	chrX,chrX,chrX	+,-,-	ARAF,ZNF41,ZNF41	75238,-2115,-2115
chr11:62647288-62647984	chr11	+	62647321	62647967	True	NR_037193,NR_003098,NM_001013251	chr11,chr11,chr11	+,-,+	SLC3A2,SNHG1,SLC3A2	1203,-23961,376
chr15:56271844-56273556	chr15	+	56271928	56273470	True	NM_198524,NM_006154	chr15,chr15	+,-	TEX9,NEDD4	384173,12416
chr19:12253920-12254481	chr19	+	12254001	12254067	True	NM_003437,NM_001203250,NM_021143	chr19,chr19,chr19	+,-,-	ZNF136,ZNF20,ZNF20	19804,-2779,-2779
chr19:39969891-39971434	chr19	+	39970044	39971382	True	NM_001001563,NM_001020	chr19,chr19	+,-	TIMM50,RPS16	-97,-43426
chr2:114257781-114258391	chr2	+	114257890	114258412	True	NM_012184,NR_024005	chr2,chr2	+,-	FOXD4L1,DDX11L2	-1280,100791
chr5:1551707-1552062	chr5	+	1551814	1552082	True	NM_024830,NM_004553	chr5,chr5	-,+	LPCAT1,NDUFS6	-27738,249413
chr8:95228679-95229322	chr8	+	95228712	95229234	True	NM_001161778,NM_004063,NM_001144663	chr8,chr8,chr8	+,-,-	PDP1,CDH17,CDH17	-298771,-7897,347
chr10:26222252-26222789	chr10	+	26222456	26222786	True	NM_017433,NR_027333	chr10,chr10	+,-	MYO3A,LOC100128811	215,-757251
chr6:150690861-150691609	chr6	+	150690869	150691259	True	NM_001164695,NM_001164694,NM_203395,NM_024518	chr6,chr6,chr6,chr6	+,+,+,-	IYD,IYD,IYD,ULBP3	-892,-892,-892,-300667
chr10:31985989-31986652	chr10	+	31985988	31986415	True	NM_001174094,NM_018287	chr10,chr10	+,-	ZEB1,ARHGAP12	-375975,231412
chr1:116918434-116918685	chr1	+	116918474	116918730	True	NM_001160234,NM_000701,NM_001160233,NR_024126	chr1,chr1,chr1,chr1	+,+,+,-	ATP1A1,ATP1A1,ATP1A1,ATP1A1OS	7261,-2739,-2045,42501
chr22:23976978-23977600	chr22	+	23977138	23977394	True	NM_153615,NM_016449	chr22,chr22	+,-	RGL4,C22orf43	55653,-2630
chr7:37905998-37907997	chr7	+	37906001	37907949	True	NM_003014,NM_016616	chr7,chr7	-,+	SFRP4,TXNDC3	48634,-17861
chr14:105301936-105302531	chr14	+	105302162	105302278	True	NR_024396,NM_001014432	chr14,chr14	+,-	MGC23270,AKT1	-14682,-40082
chr7:6688378-6688839	chr7	+	6688503	6688885	True	NM_017560,NM_006956	chr7,chr7	+,-	ZNF853,ZNF12	-33027,57731
chr7:6961895-6962533	chr7	+	6962109	6962545	True	NM_198097,NM_173565	chr7,chr7	-,+	C7orf28B,RSPH10B	-96183,-168421
chr7:6961895-6962533	chr11	+	67551401	67551745	False	NM_007103,NR_024249	chr11,chr11	+,-	NDUFV1,LOC645332	-177130,21112
chr20:32278449-32279196	chr20	+	32278898	32279204	True	NM_005225,NM_001024675	chr20,chr20	-,+	E2F1,C20orf134	-4688,-24645
chr6:34526845-34527240	chr6	+	34526851	34527133	True	NM_001199583,NM_012391	chr6,chr6	+,-	PACSIN1,SPDEF	-44253,-2760
chrX:106239841-106241559	chrX	+	106239847	106241577	True	NM_001085354,NM_020384,NM_024657	chrX,chrX,chrX	-,+,-	MORC4,CLDN2,MORC4	1947,-76292,1947
chr16:74352808-74353809	chr16	+	74352827	74353857	True	NR_026950,NM_002811	chr16,chr16	-,+	LOC283922,PSMD7	48346,-22205
chr19:5824322-5825110	chr19	+	5824471	5825139	True	NM_004558,NM_000150	chr19,chr19	+,-	NRTN,FUT6	-704,14653
chr11:66445316-66445697	chr11	+	66445317	66445543	True	NM_001198844,NM_031492	chr11,chr11	+,-	RBM4,RBM4B	-39280,-42
chr1:161629490-161630786	chr1	+	161629933	161630529	True	NM_004001,NM_001002273,NM_001190828,NM_001002274,NM_001002275,NR_002595	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-	FCGR2B,FCGR2B,FCGR2B,FCGR2B,FCGR2B,RPL31P11	2375,2375,2375,2375,2375,24563
chr1:161629490-161630786	chr1	+	161548093	161548424	False	NM_201563,NM_001127596	chr1,chr1	+,-	FCGR2C,FCGR3A	2704,-27680
chr19:15343610-15343951	chr19	+	15343792	15343950	True	NM_033025,NM_001142886,NM_024794	chr19,chr19,chr19	+,-,-	SYDE1,EPHX3,EPHX3	-125629,-14,-561
chr22:38480085-38480786	chr22	+	38480496	38480702	True	NM_013356,NM_012407	chr22,chr22	-,+	SLC16A8,PICK1	-1326,-27285
chr10:13204196-13204659	chr10	+	13204229	13204705	True	NM_018518,NM_145314,NM_182751	chr10,chr10,chr10	+,-,+	MCM10,UCMA,MCM10	-726,71673,-726
chr20:62737701-62738023	chr20	+	62737744	62738066	True	NM_001200019	chr20	+	OPRL1	-21426
chr9:67683419-67684226	chr9	+	67683645	67683855	True	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	110384,242905
chr9:67683419-67684226	chr9	-	45108541	45108591	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-118356,-1477811
chr9:67683419-67684226	chr9	+	46274728	46274778	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2643998,412787
chr17:37820449-37821431	chr17	+	37820463	37821405	True	NM_002686,NM_003673,NM_033419	chr17,chr17,chr17	+,+,-	PNMT,TCAP,PGAP3	3101,193,22955
chr3:131096654-131098603	chr3	+	131096764	131098589	True	NM_001171905,NR_033268,NM_001171906,NR_002985,NM_152395	chr3,chr3,chr3,chr3,chr3	+,+,+,-,+	NUDT16,NUDT16,NUDT16,SNORA58,NUDT16	1925,2035,2019,99539,2019
chr3:138153700-138153977	chr3	+	138153728	138153946	True	NM_031913,NM_178130	chr3,chr3	+,-	ESYT3,TXNDC6	-364,-105000
chr11:124486117-124487135	chr11	+	124486139	124486614	True	NM_032811,NR_016021,NM_052959,NM_170601	chr11,chr11,chr11,chr11	+,+,+,-	TBRG1,TBRG1,PANX3,SIAE	6127,6127,-4737,57216
chr18:28682008-28682324	chr18	+	28682067	28682309	True	NM_001942,NM_004949,NM_024422	chr18,chr18,chr18	+,-,-	DSG1,DSC2,DSC2	215742,129,129
chr11:63608631-63608973	chr11	+	63608630	63608987	True	NM_001039469,NM_001163296,NM_004954,NM_001144936,NM_001163297	chr11,chr11,chr11,chr11,chr11	+,+,+,-,+	MARK2,MARK2,MARK2,C11orf95,MARK2	-2290,-2290,-2290,-72517,-2290
chr5:36925528-36927014	chr5	+	36925844	36926809	True	NM_133433,NM_023073	chr5,chr5	+,-	NIPBL,C5orf42	-49041,322779
chr10:63431428-63432428	chr10	+	63431437	63432482	True	NM_178505,NM_173554	chr10,chr10	-,+	TMEM26,C10orf107	-218229,-8769
chr5:14146814-14148305	chr5	+	14146868	14148347	True	NM_001369,NM_007118	chr5,chr5	-,+	DNAH5,TRIO	-202279,-3090
chr19:49954021-49954377	chr19	+	49954042	49954232	True	NM_020309,NM_153329,NM_001145396,NM_017916	chr19,chr19,chr19,chr19	-,+,+,-	SLC17A7,ALDH16A1,ALDH16A1,PIH1D1	-9234,2240,2240,933
chr16:56686500-56687053	chr16	+	56686517	56687033	True	NM_005947,NM_005949,NR_003658,NM_005950,NR_027781	chr16,chr16,chr16,chr16,chr16	+,+,+,-,+	MT1B,MT1F,MT1DP,MT1G,MT1DP	-757,4821,-8852,14994,-8969
chr5:135503321-135503597	chr5	+	135503493	135503641	True	NR_024418,NM_001001419	chr5,chr5	-,+	LOC389332,SMAD5	25260,-35015
chr13:114565713-114565926	chr13	+	114565747	114565855	True	NM_000820,NR_024609	chr13,chr13	-,+	GAS6,FLJ44054	1241,20754
chr15:72525643-72526058	chr15	+	72525869	72525935	True	NM_182471,NM_182470,NM_002654,NM_145204	chr15,chr15,chr15,chr15	-,-,-,+	PKM2,PKM2,PKM2,SENP8	-2185,-2185,-2185,-115294
chr19:17621284-17621782	chr19	+	17621334	17621622	True	NM_012088,NM_138454	chr19,chr19	+,-	PGLS,NXNL1	809,-49609
chr14:61201445-61201727	chr14	+	61201447	61201775	True	NM_002431,NM_001177963,NM_017420	chr14,chr14,chr14	+,+,-	MNAT1,MNAT1,SIX4	-39,-39,-10595
chr2:219540338-219540598	chr2	+	219540546	219540614	True	NM_022453,NM_015690	chr2,chr2	-,+	RNF25,STK36	-3765,-3838
chr15:66992121-66993242	chr15	+	66992378	66993198	True	NM_005585,NR_027654,NM_207338,NM_001142861	chr15,chr15,chr15,chr15	+,+,-,+	SMAD6,SMAD6,LCTL,SMAD6	1475,1475,-134543,7731
chr17:7741818-7742326	chr17	+	7741957	7742281	True	NM_032356,NM_001080424	chr17,chr17	-,+	LSMD1,KDM6B	18941,953
chr19:58873194-58873636	chr19	+	58873285	58873485	True	NM_130786,NM_198458,NR_015380	chr19,chr19,chr19	-,-,+	A1BG,ZNF497,A1BG-AS1	-8420,685,-10000
chr4:126237971-126238307	chr4	+	126237980	126238220	True	NM_024582,NM_001167882	chr4,chr4	+,-	FAT4,ANKRD50	-464,-604093
chr11:64705763-64706559	chr11	+	64705925	64706321	True	NM_006244,NM_130769	chr11,chr11	+,-	PPP2R5B,GPHA2	-13833,-2565
chr3:25807851-25809839	chr3	+	25807932	25809233	True	NM_001145391,NM_001145293	chr3,chr3	+,-	OXSM,NGLY1	22329,15806
chr20:43739053-43739931	chr20	+	43739084	43739892	True	NM_145652,NM_002251,NM_002638	chr20,chr20,chr20	-,-,+	WFDC5,KCNS1,PI3	3961,-9331,63647
chr9:95231611-95233569	chr9	+	95231645	95233419	True	NM_001193335,NM_001012267	chr9,chr9	-,+	ASPN,CENPP	11475,-143955
chrX:44204688-44206631	chrX	+	44204961	44205964	True	NM_022076,NM_025184	chrX,chrX	+,-	DUSP21,EFHC2	497284,-2038
chr1:35260162-35260524	chr1	+	35260190	35260494	True	NM_001164824,NM_002060	chr1,chr1	-,+	C1orf212,GJA4	64202,-1642
chr7:123593874-123594287	chr7	+	123593897	123594339	True	NM_001174046,NM_001136002	chr7,chr7	+,-	SPAM1,TMEM229A	-28053,79238
chr5:138532811-138533229	chr5	+	138533005	138533163	True	NM_001194954,NM_001037633,NM_022464	chr5,chr5,chr5	+,-,-	MATR3,SIL1,SIL1	76277,958,958
chr7:129911019-129911869	chr7	+	129911036	129911865	True	NM_001869,NM_032842	chr7,chr7	+,-	CPA2,TMEM209	-4384,-65698
chr19:1906728-1907565	chr19	+	1907208	1907527	True	NM_079834,NM_031213,NM_138422	chr19,chr19,chr19	+,-,+	SCAMP4,FAM108A1,ADAT3	-1886,-21690,-1842
chr8:9010018-9010325	chr8	+	9010066	9010354	True	NM_153332,NM_024607,NM_001201329	chr8,chr8,chr8	+,-,-	ERI1,PPP1R3B,PPP1R3B	-149803,-1846,-914
chr5:175397895-175398903	chr5	+	175397953	175398634	True	NM_032361,NM_001008220	chr5,chr5	-,+	THOC3,CPLX2	-2408,-99511
chr5:175397895-175398903	chr5	-	177299180	177299861	False	NR_003615,NM_173663	chr5,chr5	+,-	LOC728554,FAM153A	2400,-91675
chr3:42847164-42848295	chr3	+	42847935	42848173	True	NM_001296,NM_001099669,NM_001099668,NM_014056	chr3,chr3,chr3,chr3	+,-,-,-	CCBP2,HIGD1A,HIGD1A,HIGD1A	2790,-1908,-2001,-1908
chr17:77729345-77729806	chr17	+	77729345	77729549	True	NM_020649,NM_032647	chr17,chr17	-,+	CBX8,CBX2	41416,22427
chr16:2802896-2803249	chr16	+	2802951	2803298	True	NM_016333,NR_027274,NR_027275	chr16,chr16,chr16	+,-,-	SRRM2,LOC100128788,LOC100128788	-672,-8153,-350
chr12:48549853-48550487	chr12	+	48550015	48550501	True	NM_024095,NM_001013635	chr12,chr12	-,+	ASB8,C12orf68	926,26864
chr19:4276850-4277229	chr19	+	4277015	4277235	True	NM_001169126,NM_020209	chr19,chr19	-,+	TMIGD2,SHD	25243,1362
chr13:37395585-37396386	chr13	+	37395827	37396204	True	NM_001127217,NM_000538	chr13,chr13	-,+	SMAD9,RFXAP	98256,-2549
chr1:247654929-247655213	chr1	+	247654980	247655238	True	NR_027309,NM_001004698	chr1,chr1	-,+	LOC148824,OR2W5	38918,-661
chr11:66383844-66384117	chr11	+	66383976	66384154	True	NM_018219,NM_001198845,NM_006328,NM_001198846,NM_001198836,NM_001198837	chr11,chr11,chr11,chr11,chr11,chr11	-,+,+,+,+,+	CCDC87,RBM14-RBM4,RBM14,RBM14-RBM4,RBM14,RBM14	-23422,2,2,2,2,2
chr3:190151583-190152599	chr3	+	190151601	190152587	True	NM_207316,NM_006580	chr3,chr3	-,+	TMEM207,CLDN16	15128,-45991
chr4:68362950-68363381	chr4	+	68363137	68363209	True	NM_001812,NM_012108	chr4,chr4	-,+	CENPC1,STAP1	48107,61236
chrX:62970248-62970584	chrX	+	62970274	62970624	True	NM_015185,NM_001010888,NM_001173480	chrX,chrX,chrX	-,+,-	ARHGEF9,ZC3H12B,ARHGEF9	4457,1737990,4457
chr4:81258795-81259922	chr4	+	81258840	81259867	True	NM_001145794,NM_152770	chr4,chr4	-,+	ANTXR2,C4orf22	-264363,-2023
chr8:114448020-114449117	chr8	+	114448249	114449114	True	NR_031745,NM_052900,NM_198123	chr8,chr8,chr8	+,-,-	MIR2053,CSMD3,CSMD3	-792578,178,178
chr4:41614035-41615789	chr4	+	41614040	41615816	True	NM_001112720,NM_003924,NM_001112719	chr4,chr4,chr4	+,-,+	LIMCH1,PHOX2B,LIMCH1	-212,135222,-212
chr19:19647410-19648108	chr19	+	19647461	19647971	True	NM_032037,NM_153221,NM_001190328,NM_198537	chr19,chr19,chr19,chr19	-,+,+,+	TSSK6,CILP2,YJEFN3,YJEFN3	-20992,1102,-7842,-7842
chr5:159549005-159550657	chr5	+	159549317	159550406	True	NM_001130864,NM_052927,NM_001130958	chr5,chr5,chr5	-,-,+	PWWP2A,PWWP2A,FABP6	-2865,-2865,63967
chr12:133664683-133665891	chr12	+	133664848	133665530	True	NM_003440,NM_001164715	chr12,chr12	+,-	ZNF140,ZNF605	-7862,-131956
chr10:61092866-61093102	chr10	+	61092945	61093010	True	NM_001001971,NM_001143774	chr10,chr10	-,+	FAM13C,PHYHIPL	29395,-155774
chr12:7126342-7127227	chr12	+	7126401	7127262	True	NM_001734,NM_005768	chr12,chr12	+,-	C1S,LPCAT3	40717,-559
chr3:133293382-133294775	chr3	+	133293424	133294696	True	NM_001134423,NM_001134422,NM_017548,NM_007027	chr3,chr3,chr3,chr3	+,+,+,-	CDV3,CDV3,CDV3,TOPBP1	-174,-1041,-1041,86099
chr11:111641875-111642861	chr11	+	111642179	111642747	True	NM_181699,NM_181700,NM_022761,NM_002716,NM_001177563,NM_001177562	chr11,chr11,chr11,chr11,chr11,chr11	-,-,+,-,-,-	PPP2R1B,PPP2R1B,C11orf1,PPP2R1B,PPP2R1B,PPP2R1B	-5010,-5010,107200,-5010,-5010,-5010
chr11:118843590-118844200	chr11	+	118843645	118843982	True	NR_003040,NM_181721	chr11,chr11	-,+	RPL23AP64,FOXR1	30382,-1279
chr20:52682904-52683633	chr20	+	52682953	52683640	True	NM_003657,NM_002623	chr20,chr20	-,+	BCAS1,PFDN4	3721,140861
chr21:46339138-46339371	chr21	+	46339163	46339369	True	NM_058190,NM_000211,NM_001127491	chr21,chr21,chr21	+,-,-	C21orf70,ITGB2,ITGB2	20585,1646,9434
chr11:19369865-19371065	chr11	+	19369890	19370826	True	NM_001111018,NM_024680	chr11,chr11	+,-	NAV2,E2F8	1444,-107383
chrX:153708927-153709543	chrX	+	153709056	153709274	True	NM_001142392,NM_019848,NM_001142391,NM_014235,NM_017514,NM_006014	chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,+,-	SLC10A3,SLC10A3,SLC10A3,UBL4A,PLXNA3,LAGE3	9778,9778,9778,5708,-22491,-1460
chr8:28744820-28745391	chr8	+	28744884	28745337	True	NM_001172562,NM_024567,NR_026826,NM_001135726,NM_018250,NM_001145159	chr8,chr8,chr8,chr8,chr8,chr8	-,+,-,+,-,-	INTS9,HMBOX1,INTS9,HMBOX1,INTS9,INTS9	2152,2887,2418,2573,2418,2418
chr1:231541830-231542212	chr1	+	231542096	231542225	True	NM_032018,NM_022051	chr1,chr1	+,-	C1orf124,EGLN1	-68476,18622
chr19:44770868-44771828	chr19	+	44771000	44771871	True	NM_004234,NM_181756	chr19,chr19	-,+	ZNF235,ZNF233	37357,-6984
chr11:8190588-8190832	chr11	+	8190714	8190858	True	NM_177972,NM_024557,NM_001135109	chr11,chr11,chr11	+,-,-	TUB,RIC3,RIC3	-87856,-124,-124
chr3:46245805-46246341	chr3	+	46245840	46246302	True	NM_001295,NM_001164680	chr3,chr3	-,+	CCR1,CCR3	3580,37569
chr1:13640650-13642482	chr1	+	13641053	13641911	True	NM_001012276,NM_001098376,NM_001010890	chr1,chr1,chr1	-,+,+	PRAMEF8,PRAMEF15,PRAMEF9	-29503,61,61
chr1:13640650-13642482	chr1	-	12946109	12946159	False	NM_001009611,NM_023014	chr1,chr1	-,+	PRAMEF4,PRAMEF2	-84,-29219
chr1:13640650-13642482	chr1	+	13420256	13421114	False	NM_001012276,NM_001098376,NM_001010890	chr1,chr1,chr1	-,+,+	PRAMEF8,PRAMEF15,PRAMEF9	-29491,61,61
chr4:42399421-42399630	chr4	+	42399429	42399679	True	NM_207406,NM_001080505	chr4,chr4	-,+	BEND4,SHISA3	-244534,176
chr3:16927144-16927381	chr3	+	16927149	16927400	True	NM_001144382,NM_001351	chr3,chr3	+,-	PLCL2,DAZL	-749,-280143
chr4:87836014-87837075	chr4	+	87836023	87837072	True	NM_144645,NM_001166693	chr4,chr4	-,+	C4orf36,AFF1	-22448,19081
chr13:113034956-113036114	chr13	+	113035145	113036035	True	NM_006322,NM_145248	chr13,chr13	-,+	TUBGCP3,SPACA7	206496,-4558
chr3:49725571-49726124	chr3	+	49725703	49726171	True	NM_022064,NM_020998	chr3,chr3	+,-	RNF123,MST1	818,75
chr7:16917409-16917609	chr7	+	16917585	16917664	True	NM_176813,NM_014399	chr7,chr7	-,+	AGR3,TSPAN13	4006,-124293
chr20:44175791-44177389	chr20	+	44175911	44177152	True	NM_020398,NM_080827,NM_006103,NM_001198986	chr20,chr20,chr20,chr20	-,-,+,-	SPINLW1,WFDC6,WFDC2,SPINLW1-WFDC6	-88,-7777,-77568,-88
chr17:64958768-64959205	chr17	+	64958856	64959240	True	NM_014877,NM_014405	chr17,chr17	-,+	HELZ,CACNG4	282129,1739
chr4:9680219-9680830	chr4	+	9680446	9680521	True	NR_031688,NM_000798	chr4,chr4	-,+	MIR548I2,DRD5	-122509,102736
chr12:10161933-10162569	chr12	+	10162002	10162496	True	NM_016509,NM_001129998,NM_205852	chr12,chr12,chr12	-,+,+	CLEC1B,CLEC12B,CLEC12B	-10103,734,734
chr9:35727122-35728418	chr9	+	35727151	35728383	True	NM_006289,NM_006368	chr9,chr9	-,+	TLN1,CREB3	4059,3933
chr12:31745171-31745582	chr12	+	31745284	31745422	True	NM_001135864,NM_144973	chr12,chr12	+,-	METTL20,DENND5B	54671,-1332
chr17:37320475-37321100	chr17	+	37320487	37320943	True	NM_000981,NM_001143968	chr17,chr17	+,-	RPL19,ARL5C	35592,1521
chr11:290007-290423	chr11	+	290039	290301	True	NM_001025295,NM_025092	chr11,chr11	-,+	IFITM5,ATHL1	9275,-952
chr5:55776783-55777013	chr5	+	55776848	55776914	True	NM_024669,NM_005921	chr5,chr5	-,+	ANKRD55,MAP3K1	-247662,333985
chr17:20516831-20517037	chr17	+	20516835	20517011	True	NM_001190790,NR_029393	chr17,chr17	+,-	CDRT15L2,KRT16P3	-33849,-109024
chr15:85923172-85923939	chr15	+	85923218	85923718	True	NM_007200,NR_031682,NM_006738	chr15,chr15,chr15	+,-,+	AKAP13,MIR1276,AKAP13	152,390141,152
chr7:72298579-72298849	chr7	+	72298673	72298821	True	NR_001588,NR_024110,NR_024111,NR_024109,NM_001145441,NM_001145440	chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,-,-	SBDSP1,SBDSP1,SBDSP1,SBDSP1,TYW1B,TYW1B	1130,1130,1130,1130,42,42
chr9:102582437-102583287	chr9	+	102582442	102583215	True	NM_173199,NM_015051,NM_173200,NM_006981	chr9,chr9,chr9,chr9	+,-,+,+	NR4A3,ERP44,NR4A3,NR4A3	921,278170,5793,921
chr19:44555529-44555964	chr19	+	44555586	44555976	True	NR_033341,NM_013361	chr19,chr19	-,+	LOC100379224,ZNF223	61410,187
chr21:38829133-38829489	chr21	+	38829132	38829287	True	NM_006052,NM_001396	chr21,chr21	-,+	DSCR3,DYRK1A	-189299,-36587
chr12:14956088-14956333	chr12	+	14956131	14956381	True	NM_175874,NM_016312	chr12,chr12	+,-	C12orf60,WBP11	124,70
chr11:68674200-68675235	chr11	+	68674770	68675112	True	NM_181515,NM_181514,NM_002180	chr11,chr11,chr11	-,-,+	MRPL21,MRPL21,IGHMBP2	-3467,-3467,-3502
chr2:230787711-230788753	chr2	+	230787779	230788154	True	NM_174899,NM_004238	chr2,chr2	+,-	FBXO36,TRIP12	-623,-1124
chrX:73522602-73523620	chrX	+	73522763	73523394	True	NM_203303,NR_028379	chrX,chrX	+,-	ZCCHC13,MIR374AHG	630,-9354
chr4:123842548-123843177	chr4	+	123842793	123843179	True	NM_198041,NM_007083,NM_145207	chr4,chr4,chr4	-,-,+	NUDT6,NUDT6,SPATA5	1007,643,1045
chr15:41061530-41062198	chr15	+	41061565	41062199	True	NM_018145,NM_001130448,NM_005258	chr15,chr15,chr15	-,+,+	FAM82A2,C15orf62,GCHFR	-14107,3,-5331
chr16:57673256-57673957	chr16	+	57673262	57673882	True	NM_001145774,NM_033212	chr16,chr16	+,-	GPR56,CCDC102A	-106,-102785
chr11:2293639-2293870	chr11	+	2293682	2293862	True	NM_139022,NM_005170	chr11,chr11	+,-	TSPAN32,ASCL2	29380,-1500
chr19:3969738-3970535	chr19	+	3969846	3970572	True	NM_170678,NM_015897,NM_001348,NR_030367	chr19,chr19,chr19,chr19	+,+,-,-	ITGB1BP3,PIAS4,DAPK3,MIR637	-36796,37176,-20,-8336
chr21:42688642-42689082	chr21	+	42688642	42689003	True	NM_058186,NM_206964,NM_182832	chr21,chr21,chr21	+,+,-	FAM3B,FAM3B,PLAC4	-32,-32,-131476
chr12:51593213-51593493	chr12	+	51593237	51593415	True	NM_002702,NM_001136264	chr12,chr12	-,+	POU6F1,DAZAP2	-1287,39092
chr4:115986356-115988234	chr4	+	115986452	115988221	True	NM_022569,NR_030303	chr4,chr4	-,+	NDST4,MIR577	46862,-408593
chr3:99590671-99592594	chr3	+	99590905	99592624	True	NM_014890,NM_032359	chr3,chr3	-,+	FILIP1L,C3orf26	2478,-54279
chr2:225855361-225855813	chr2	+	225855418	225855731	True	NM_014689,NM_020864	chr2,chr2	-,+	DOCK10,KIAA1486	51650,409870
chr19:47219830-47220057	chr19	+	47219859	47220051	True	NM_001079882,NM_001039885,NM_001079880,NM_001079881,NM_016457,NR_036157	chr19,chr19,chr19,chr19,chr19,chr19	-,+,-,-,-,-	PRKD2,FKRP,PRKD2,PRKD2,PRKD2,MIR320E	-2282,29251,383,383,383,-7257
chr17:54964771-54965406	chr17	+	54964772	54965248	True	NR_027025,NM_003647	chr17,chr17	-,+	MTVR2,DGKE	-2498,-53376
chr2:106363368-106363764	chr2	+	106363423	106363790	True	NM_003581,NM_001004722,NM_201557	chr2,chr2,chr2	+,+,-	NCK2,NCK2,FHL2	-1955,-1955,-308193
chr17:11790194-11791390	chr17	+	11790223	11790933	True	NM_004662,NM_144680	chr17,chr17	+,-	DNAH9,ZNF18	-4058,109806
chr1:78720199-78721856	chr1	+	78720405	78721766	True	NR_027310,NM_003902	chr1,chr1	+,-	MGC27382,FUBP1	-25180,-275628
chr7:48047272-48047511	chr7	+	48047276	48047427	True	NM_001030019,NM_001100159	chr7,chr7	-,+	SUN3,C7orf57	21346,27689
chr12:4693880-4694780	chr12	+	4694023	4694584	True	NM_020374,NM_003845	chr12,chr12	-,+	C12orf4,DYRK4	-46386,4659
chr16:3406723-3406971	chr16	+	3406751	3407011	True	NM_012368,NM_001190476	chr16,chr16	+,-	OR2C1,MTRNR2L4	-913,15322
chr2:60779004-60779487	chr2	+	60779048	60779452	True	NM_022894,NM_022893,NM_138559,NM_018014	chr2,chr2,chr2,chr2	+,-,-,-	PAPOLG,BCL11A,BCL11A,BCL11A	203912,1231,1231,1231
chr22:38300599-38301552	chr22	+	38300699	38301283	True	NM_032561,NM_033386	chr22,chr22	-,+	C22orf23,MICALL1	48370,1062
chr1:1510744-1511091	chr1	+	1510754	1511099	True	NM_001170686,NM_014188	chr1,chr1	+,-	MIB2,SSU72	39695,-492
chr11:119601378-119601627	chr11	+	119601402	119601652	True	NM_203286,NM_203285,NR_034160,NM_002855	chr11,chr11,chr11,chr11	-,-,+,-	PVRL1,PVRL1,LOC100499227,PVRL1	-1967,-1967,-348965,-1967
chr8:142430481-142431896	chr8	+	142430696	142431828	True	NM_005293,NM_007079,NM_032611	chr8,chr8,chr8	-,+,+	GPR20,PTP4A3,PTP4A3	-53331,178,178
chr2:27497115-27497945	chr2	+	27497327	27497895	True	NM_003459,NM_173650,NM_187841,NM_032546	chr2,chr2,chr2,chr2	-,+,+,+	SLC30A3,DNAJC5G,TRIM54,TRIM54	-11367,393,7401,7401
chr15:28568474-28568905	chr15	+	28568660	28568883	True	NM_004667,NR_033351	chr15,chr15	-,+	HERC2,GOLGA8F	-1365,54900
chr15:28568474-28568905	chr15	-	28833031	28833254	False	NR_036443,NR_033351	chr15,chr15	+,-	HERC2P9,GOLGA8F	66333,-54888
chr15:28568474-28568905	chr15	+	20712788	20713011	False	NR_036432,NR_027411	chr15,chr15	-,+	HERC2P3,GOLGA8C	-1355,54662
chr15:28568474-28568905	chr15	+	23379580	23379803	False	NR_002824,NR_036470	chr15,chr15	-,+	HERC2P2,HERC2P7	-1321,10918
chr3:121293597-121294741	chr3	+	121293701	121294478	True	NM_001012659,NM_199420	chr3,chr3	+,-	ARGFX,POLQ	-6974,-28848
chr3:101302314-101302801	chr3	+	101302781	101302849	True	NM_020654,NM_020357	chr3,chr3	-,+	SENP7,PCNP	-70696,-9790
chr1:41131872-41132208	chr1	+	41131986	41132246	True	NM_001142587,NM_014747	chr1,chr1	+,-	NFYC,RIMS3	24995,-662
chr16:4164078-4164619	chr16	+	4164146	4164458	True	NM_001116,NM_032575	chr16,chr16	-,+	ADCY9,GLIS2	1778,217766
chrX:148669179-148670504	chrX	+	148669493	148670443	True	NM_016153,NM_001164415,NM_005365,NM_001171909,NM_001080790	chrX,chrX,chrX,chrX,chrX	-,-,-,+,-	HSFX1,HSFX2,MAGEA9,CXorf40A,MAGEA9B	6581,6581,-384,-43479,-377
chrX:148669179-148670504	chrX	-	148862265	148863215	False	NM_016153,NM_001164415,NM_032508,NM_005365,NM_001080790	chrX,chrX,chrX,chrX,chrX	+,+,-,+,+	HSFX1,HSFX2,TMEM185A,MAGEA9,MAGEA9B	-6590,-6590,-148778,384,377
chr19:41106321-41106890	chr19	+	41106338	41106814	True	NM_001042544,NM_001042545,NM_004756,NM_003573	chr19,chr19,chr19,chr19	+,+,-,+	LTBP4,LTBP4,NUMBL,LTBP4	-3248,462,89792,-7317
chr3:185096301-185097074	chr3	+	185096750	185097082	True	NM_080652,NM_004721	chr3,chr3	-,+	TMEM41A,MAP3K13	119813,-15834
chr14:95783463-95784785	chr14	+	95783488	95784495	True	NR_015415,NM_024734	chr14,chr14	+,-	FLJ45244,CLMN	-159514,1801
chr9:117913398-117914218	chr9	+	117913503	117914156	True	NM_017418,NM_002160	chr9,chr9	+,-	DEC1,TNC	-9457,-33017
chr20:47661137-47662862	chr20	+	47661884	47662744	True	NM_001037328,NM_001316	chr20,chr20	-,+	STAU1,CSE1L	142210,93
chr1:45805179-45805668	chr1	+	45805197	45805689	True	NM_001128425,NM_012222,NM_025077,NM_001048174,NM_001048173,NM_001048172,NM_001048171	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,+,-,-,-,-	MUTYH,MUTYH,TOE1,MUTYH,MUTYH,MUTYH,MUTYH	503,503,-14,-10,148,148,503
chr4:184244563-184245077	chr4	+	184244734	184245076	True	NM_001111319,NM_001185149,NM_017632	chr4,chr4,chr4	-,-,+	CLDN22,CLDN24,CDKN2AIP	-2807,-1155,120712
chr10:90598399-90600019	chr10	+	90598534	90600039	True	NM_144590,NM_001128215	chr10,chr10	-,+	ANKRD22,LIPM	11751,-36099
chr8:81750110-81750405	chr8	+	81750183	81750443	True	NM_001033723,NM_023929	chr8,chr8	-,+	ZNF704,ZBTB10	36625,-351786
chr2:238704380-238705219	chr2	+	238704576	238705201	True	NM_001080504,NR_033308	chr2,chr2	+,-	RBM44,RAB17	2186,-204807
chr11:1243149-1243398	chr11	+	1243179	1243371	True	NM_019009,NM_002458	chr11,chr11	-,+	TOLLIP,MUC5B	87571,923
chr3:129935516-129936681	chr3	+	129935712	129936555	True	NR_027898,NR_024252	chr3,chr3	+,-	COL6A4P2,LOC729375	-4112,-105436
chr17:49198382-49198691	chr17	+	49198494	49198740	True	NM_001130528,NM_001018136,NM_003971	chr17,chr17,chr17	-,+,-	SPAG9,NME1-NME2,SPAG9	-268,32156,-268
chr12:26348754-26348981	chr12	+	26348849	26348971	True	NM_001135823,NM_005086,NM_030762	chr12,chr12,chr12	+,+,-	SSPN,SSPN,BHLHE41	-631,-394,-70846
chr1:236030460-236030962	chr1	+	236030565	236030904	True	NM_000081,NM_003272	chr1,chr1	-,+	LYST,GPR137B	-345,274927
chr17:60216682-60216921	chr17	+	60216716	60216910	True	NM_001144933,NM_005121	chr17,chr17	+,-	EFCAB3,MED13	230668,-74073
chr10:134754240-134754744	chr10	+	134754249	134754561	True	NM_173572,NM_001083909	chr10,chr10	-,+	C10orf93,GPR123	1586,146847
chr4:13627867-13628749	chr4	+	13627970	13628724	True	NM_148894,NR_003132	chr4,chr4	-,+	BOD1L,HSP90AB2P	654,-292991
chr11:62390234-62390814	chr11	+	62390550	62390618	True	NM_012200,NM_000327	chr11,chr11	-,+	B3GAT3,ROM1	-1102,-10391
chr21:46102982-46104117	chr21	+	46103024	46104159	True	NM_181686,NM_198699	chr21,chr21	-,+	KRTAP12-1,KRTAP10-12	-946,12927
chr3:183601985-183602693	chr3	+	183602015	183602525	True	NM_182537,NM_018622,NM_001037639	chr3,chr3,chr3	+,-,-	HTR3D,PARL,PARL	146806,218,218
chr22:41818049-41819655	chr22	+	41818823	41819493	True	NM_016272,NM_003216	chr22,chr22	-,+	TOB2,TEF	23589,-40920
chr2:17934320-17934579	chr2	+	17934406	17934530	True	NM_024624,NM_001130009,NM_001142286,NM_182625	chr2,chr2,chr2,chr2	-,+,-,+	SMC6,GEN1,SMC6,GEN1	616,883,616,646
chr11:101780039-101781063	chr11	+	101780041	101780805	True	NM_020802,NM_178127	chr11,chr11	+,-	KIAA1377,ANGPTL5	4940,6500
chrX:47696601-47698371	chrX	+	47696686	47697742	True	NM_007137,NM_001007088	chrX,chrX	+,-	ZNF81,ZNF182	-443,165691
chr6:49515686-49517012	chr6	+	49516002	49516745	True	NM_000255,NM_001145652	chr6,chr6	-,+	MUT,C6orf141	-84961,1367
chrX:152711612-152712108	chrX	+	152712010	152712082	True	NM_080701,NM_001136273	chrX,chrX	-,+	TREX2,ZFP92	-65,-28280
chr2:179189378-179190492	chr2	+	179189561	179190507	True	NM_001139518,NM_145739	chr2,chr2	-,+	PRKRA,OSBPL6	124908,-4642
chr15:75575663-75575920	chr15	+	75575723	75575783	True	NR_030360,NM_001145224	chr15,chr15	-,+	MIR631,GOLGA6D	70293,-592
chr15:75575663-75575920	chr15	-	78218600	78218660	False	NM_001101404,NR_027024	chr15,chr15	+,-	SH2D7,LOC645752	166266,578
chr15:75575663-75575920	chr15	+	72947585	72947645	False	NR_002780,NM_018652	chr15,chr15	-,+	HIGD2B,GOLGA6B	30895,-598
chr15:75575663-75575920	chr15	-	74374283	74374343	False	NM_001130136,NM_001038640	chr15,chr15	+,-	ISLR2,GOLGA6A	47371,598
chr1:44449079-44449918	chr1	+	44449130	44449873	True	NM_001005417,NM_003780,NM_004047,NM_152499,NM_001039457,NM_006934	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-	B4GALT2,B4GALT2,ATP6V0B,CCDC24,ATP6V0B,SLC6A9	-2998,-4315,-8579,7406,-8579,33174
chr20:44746277-44746649	chr20	+	44746369	44746679	True	NM_152854,NM_001250,NM_020967	chr20,chr20,chr20	+,+,-	CD40,CD40,NCOA5	226,226,-27789
chr5:38853126-38855075	chr5	+	38853520	38855074	True	NM_003999,NM_001168355,NM_152756	chr5,chr5,chr5	+,+,-	OSMR,OSMR,RICTOR	-7475,-7616,219477
chr17:3572579-3572782	chr17	+	3572626	3572778	True	NM_001204698,NM_001014764,NM_014604,NM_031298	chr17,chr17,chr17,chr17	-,+,-,+	TAX1BP3,TMEM93,TAX1BP3,TMEM93	-653,-587,-653,-587
chr10:32048315-32048607	chr10	+	32048337	32048405	True	NM_001174094,NM_018287	chr10,chr10	+,-	ZEB1,ARHGAP12	-438324,169415
chr11:102573229-102573540	chr11	+	102573281	102573539	True	NM_001166,NM_022122	chr11,chr11	+,-	BIRC2,MMP27	-355379,2979
chr5:172198544-172198977	chr5	+	172198815	172199007	True	NM_004417,NM_001031711	chr5,chr5	-,+	DUSP1,ERGIC1	-612,62215
chr11:33563652-33564782	chr11	+	33563840	33564764	True	NM_012194,NM_001166692	chr11,chr11	+,-	C11orf41,C11orf91	-14,157572
chr6:155585308-155586255	chr6	+	155585342	155586192	True	NM_001001346,NM_016020	chr6,chr6	+,-	CLDN20,TFB1M	-246,49475
chr20:34825999-34826551	chr20	+	34826041	34826321	True	NR_027451,NM_015511	chr20,chr20	-,+	LOC647979,C20orf4	-187159,-1654
chr15:42841094-42841940	chr15	+	42841096	42841576	True	NM_001130447,NM_153260,NM_018097	chr15,chr15,chr15	+,-,+	HAUS2,LRRC57,HAUS2	-136,-94,-136
chr14:21359331-21359801	chr14	+	21359440	21359810	True	NM_002935,NM_198235	chr14,chr14	+,-	RNASE3,RNASE1	27,-88404
chr6:150689484-150690086	chr6	+	150689501	150690123	True	NM_001164695,NM_001164694,NM_203395,NM_024518	chr6,chr6,chr6,chr6	+,+,+,-	IYD,IYD,IYD,ULBP3	0,0,0,-299299
chr1:66258238-66258477	chr1	+	66258379	66258471	True	NM_002600,NM_001037341,NR_029516	chr1,chr1,chr1	+,+,-	PDE4B,PDE4B,MIR101-1	384,-237,-734188
chr18:11908613-11908843	chr18	+	11908628	11908788	True	NM_023075,NM_020412	chr18,chr18	-,+	MPPE1,CHMP1B	9,-57290
chr1:156892234-156893012	chr1	+	156892235	156893059	True	NM_144702,NR_030527	chr1,chr1	+,-	LRRC71,MIR765	-1862,13027
chr19:53030163-53030654	chr19	+	53030421	53030701	True	NM_001039886,NM_001105549	chr19,chr19	+,-	ZNF808,ZNF83	207,110993
chr4:333706-335008	chr4	+	333744	334792	True	NM_001137608,NM_003441	chr4,chr4	-,+	ZNF732,ZNF141	-43800,-2211
chr5:140615960-140616350	chr5	+	140616093	140616375	True	NM_018935,NR_001282,NR_001281,NM_031947	chr5,chr5,chr5,chr5	+,+,+,-	PCDHB15,PCDHB19P,PCDHB18,SLC25A2	8771,3313,-2206,67287
chr19:10401591-10401848	chr19	+	10401718	10401886	True	NM_022377,NM_001544,NM_001039132,NM_003259,NM_001103167	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	ICAM4,ICAM4,ICAM4,ICAM5,ZGLP1	-4119,-4119,-4119,-1114,18397
chr1:160150663-160151062	chr1	+	160150836	160151041	True	NM_001231,NR_028106,NM_001001734	chr1,chr1,chr1	+,-,+	CASQ1,DCAF8,ATP1A4	9243,81287,-3699
chr17:3704600-3705763	chr17	+	3704776	3705777	True	NM_031965,NM_002208	chr17,chr17	+,-	GSG2,ITGAE	-77630,-239
chr11:64415109-64416134	chr11	+	64415215	64416055	True	NM_153378,NM_138734	chr11,chr11	+,-	SLC22A12,NRXN2	-56984,-4428
chr20:44444071-44444638	chr20	+	44444140	44444544	True	NM_181803,NM_181802,NM_181801,NM_181800,NM_007019,NM_003279,NM_181799	chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,+,+,+,+,-,+	UBE2C,UBE2C,UBE2C,UBE2C,UBE2C,TNNC2,UBE2C	-2936,-2936,-2519,-2936,-2936,11459,-2936
chr16:31103900-31104896	chr16	+	31103955	31104929	True	NM_001122957,NM_024006,NM_206824,NM_001039503	chr16,chr16,chr16,chr16	+,-,-,-	BCKDK,VKORC1,VKORC1,PRSS53	14732,1397,1397,-3825
chr6:134497289-134497494	chr6	+	134497332	134497478	True	NM_004865,NM_001143678,NM_005627,NM_001143677	chr6,chr6,chr6,chr6	+,-,-,-	TBPL1,SGK1,SGK1,SGK1	-223082,-262,-1298,1582
chr21:43614747-43615164	chr21	+	43614953	43615091	True	NR_027243,NM_207627,NM_207628	chr21,chr21,chr21	-,+,+	C21orf128,ABCG1,ABCG1	-86309,4707,4830
chr1:33936411-33937998	chr1	+	33936467	33938015	True	NM_145238,NM_198040	chr1,chr1	+,-	ZSCAN20,PHC2	216,-95273
chr19:55740776-55741303	chr19	+	55740790	55741220	True	NM_173804,NM_032430	chr19,chr19	-,+	TMEM86B,BRSK1	-158,54313
chr5:99381865-99382556	chr5	+	99381883	99382485	True	NM_198507,NR_027503	chr5,chr5	+,-	FAM174A,LOC100133050	488638,341523
chr15:51396567-51397971	chr15	+	51396631	51397986	True	NR_027642,NM_207381	chr15,chr15	+,-	LOC100132724,TNFAIP8L3	-160356,-8
chr1:28261048-28261365	chr1	+	28261162	28261315	True	NM_001009568,NM_002946,NM_014474	chr1,chr1,chr1	+,-,+	SMPDL3B,RPA2,SMPDL3B	188,-19926,188
chr1:154174996-154176270	chr1	+	154175952	154176244	True	NR_030600,NM_001010979,NM_001127320	chr1,chr1,chr1	-,-,+	MIR190B,C1orf189,UBAP2L	-9733,2623,16410
chr22:36877847-36878136	chr22	+	36878042	36878174	True	NM_012473,NM_145343	chr22,chr22	-,+	TXN2,APOL1	-355,-228976
chr7:76088417-76089076	chr7	+	76088899	76088984	True	NM_020892,NR_003262,NM_001102594,NM_001102595	chr7,chr7,chr7,chr7	+,-,+,+	DTX2,FDPSL2A,DTX2,DTX2	1987,15384,1987,1987
chr7:76088417-76089076	chr7	+	76587007	76587092	False	NR_023383,NM_006682	chr7,chr7	+,-	PMS2P11,FGL2	23046,242109
chr18:24447480-24449431	chr18	+	24447505	24449443	True	NM_004028,NR_026908,NM_001650	chr18,chr18,chr18	-,+,-	AQP4,C18orf16,AQP4	-4930,-2285,-1789
chr4:91062109-91062482	chr4	+	91062246	91062528	True	NM_001145065,NM_001146055	chr4,chr4	+,-	FAM190A,SNCA	-13614,-302799
chr3:115389298-115389686	chr3	+	115389302	115389730	True	NM_002045,NM_015642	chr3,chr3	+,-	GAP43,ZBTB20	-47202,-523175
chr8:9010325-9011453	chr8	+	9010328	9010766	True	NM_153332,NM_024607,NM_001201329	chr8,chr8,chr8	+,-,-	ERI1,PPP1R3B,PPP1R3B	-150070,-2108,-1176
chr19:41103278-41104067	chr19	+	41103390	41103953	True	NM_001042544,NM_001042545,NM_004756,NM_003573	chr19,chr19,chr19,chr19	+,+,-,+	LTBP4,LTBP4,NUMBL,LTBP4	-300,3323,92653,-4369
chr20:31332554-31333242	chr20	+	31332989	31333121	True	NM_006892,NM_001099339,NM_053041	chr20,chr20,chr20	+,-,-	DNMT3B,COMMD7,COMMD7	17069,-1175,-1175
chr2:32388393-32388809	chr2	+	32388399	32388492	True	NM_017964,NM_001193513,NM_001199138,NM_001193514,NM_001193515	chr2,chr2,chr2,chr2,chr2	+,+,-,+,+	SLC30A6,SLC30A6,NLRC4,SLC30A6,SLC30A6	2417,2417,101514,2417,2417
chr1:150241587-150241996	chr1	+	150241602	150242026	True	NM_024579,NM_016022,NM_001077628	chr1,chr1,chr1	+,-,-	C1orf54,APH1A,APH1A	3156,-70,-70
chr8:96034537-96035514	chr8	+	96034841	96035512	True	NR_037484,NM_152416	chr8,chr8	-,+	MIR3150B,C8orf38	49762,1708
chr7:48068025-48069956	chr7	+	48068025	48069973	True	NM_001030019,NM_001100159,NM_152782	chr7,chr7,chr7	-,+,-	SUN3,C7orf57,SUN3	-71,5143,-71
chr10:96161887-96162171	chr10	+	96161888	96162148	True	NM_022451,NM_015188	chr10,chr10	-,+	NOC3L,TBC1D12	-39205,37
chr8:23104564-23105297	chr8	+	23104836	23105326	True	NM_152272,NM_003844	chr8,chr8	+,-	CHMP7,TNFRSF10A	-3740,-22156
chr1:157069609-157070799	chr1	+	157069608	157070819	True	NM_001004341,NR_001560	chr1,chr1	-,+	ETV3L,CYCSP52	-8,27334
chr19:42361109-42361818	chr19	+	42361358	42361566	True	NM_001022,NM_173506	chr19,chr19	+,-	RPS19,LYPD4	2421,-12850
chr11:117051926-117052395	chr11	+	117052018	117052418	True	NM_001040455,NM_004716	chr11,chr11	+,-	SIDT2,PCSK7	-2130,50443
chr1:17339201-17339843	chr1	+	17339296	17339858	True	NM_014675,NM_001141974,NM_001141973,NM_022089	chr1,chr1,chr1,chr1	+,-,-,-	CROCC,ATP13A2,ATP13A2,ATP13A2	-90902,-873,-873,-873
chr2:9693726-9694114	chr2	+	9693838	9693920	True	NM_001039613,NM_003183	chr2,chr2	+,-	IAH1,ADAM17	-79228,2047
chr5:133747289-133747566	chr5	+	133747297	133747605	True	NM_003337,NM_080656	chr5,chr5	+,-	UBE2B,CDKN2AIPNL	-40478,43
chr7:50796389-50797441	chr7	+	50796679	50797347	True	NM_001001549,NM_005311,NR_033845	chr7,chr7,chr7	-,-,+	GRB10,GRB10,LOC100129427	2753,2753,-197273
chr6:43145507-43146854	chr6	+	43145878	43146738	True	NM_006443,NM_003131,NM_015089	chr6,chr6,chr6	-,+,+	C6orf108,SRF,CUL9	50523,-7010,3183
chr1:21836478-21837210	chr1	+	21836552	21837130	True	NM_001177520,NM_001145658,NM_000478,NM_001127501	chr1,chr1,chr1,chr1	+,-,+,+	ALPL,RAP1GAP,ALPL,ALPL	-745,141268,-745,-745
chr2:128417105-128418081	chr2	+	128417179	128418101	True	NM_005291,NM_017980	chr2,chr2	+,-	GPR17,LIMS2	-13791,4116
chr12:14517205-14517950	chr12	+	14517345	14517979	True	NM_024829,NM_018179	chr12,chr12	-,+	PLBD1,ATF7IP	202862,631
chr1:223538698-223539773	chr1	+	223538704	223539657	True	NM_017982,NM_152610,NM_001037175	chr1,chr1,chr1	-,+,-	SUSD4,C1orf65,SUSD4	-1160,27057,-1160
chr9:90630849-90631147	chr9	+	90631045	90631109	True	NM_178432,NM_001145124	chr9,chr9	-,+	CDK20,FAM75C1	-41350,-98219
chrX:44403855-44404624	chrX	+	44403927	44404551	True	NM_022076,NM_173794	chrX,chrX	+,-	DUSP21,FUNDC1	298697,-1706
chr2:242642632-242643837	chr2	+	242642684	242643713	True	NR_033255,NM_032329	chr2,chr2	-,+	DTYMK,ING5	-16301,-1292
chr19:55014126-55014355	chr19	+	55014130	55014260	True	NM_145057,NM_021270,NM_002288	chr19,chr19,chr19	-,+,+	CDC42EP5,LAIR2,LAIR2	-29708,-168,-168
chr17:39674192-39674587	chr17	+	39674439	39674633	True	NM_005801,NM_002275	chr17,chr17	+,-	EIF1,KRT15	170493,687
chr12:57702391-57703001	chr12	+	57702495	57703029	True	NM_014925,NM_001166357	chr12,chr12	-,+	R3HDM2,SHMT2	1271,-78409
chr4:57299982-57301155	chr4	+	57300273	57301137	True	NM_006452,NM_002703,NM_001079524,NM_001079525	chr4,chr4,chr4,chr4	+,-,+,+	PAICS,PPAT,PAICS,PAICS	777,715,1131,1131
chr6:117587727-117588040	chr6	+	117587726	117588058	True	NM_002944,NM_182645,NM_153453	chr6,chr6,chr6	-,+,+	ROS1,VGLL2,VGLL2	159012,-1041,-1057
chr3:112279013-112280140	chr3	+	112279293	112280076	True	NM_017945,NM_022488	chr3,chr3	+,-	SLC35A5,ATG3	818,459
chrX:52737377-52737936	chrX	+	52737406	52737472	True	NM_003147,NM_175698,NM_001164417	chrX,chrX,chrX	-,-,-	SSX2,SSX2,SSX2B	-1157,-1157,-1157
chrX:52737377-52737936	chrX	-	52779084	52779150	False	NM_003147,NM_175698,NM_001164417	chrX,chrX,chrX	+,+,+	SSX2,SSX2,SSX2B	1157,1157,1157
chr5:172661994-172662211	chr5	+	172662002	172662240	True	NM_004387,NM_013980,NM_001166175,NM_001166176	chr5,chr5,chr5,chr5	-,+,-,-	NKX2-5,BNIP1,NKX2-5,NKX2-5	125,-90608,125,125
chr17:19141549-19141761	chr17	+	19141648	19141808	True	NM_014964,NM_148921,NM_001102664,NR_031591	chr17,chr17,chr17,chr17	+,+,+,-	EPN2,EPN2,EPN2,MIR1180	-1009,-1009,-1009,106129
chr1:1310000-1310228	chr1	+	1310013	1310225	True	NM_001127230,NM_001127229,NM_017900,NR_015434	chr1,chr1,chr1,chr1	-,-,-,+	AURKAIP1,AURKAIP1,AURKAIP1,LOC148413	387,405,643,24684
chr1:51436221-51436681	chr1	+	51436220	51436726	True	NM_001262,NM_007051,NM_078626	chr1,chr1,chr1	+,-,+	CDKN2C,FAF1,CDKN2C	-1906,-10284,-631
chr11:20182556-20182931	chr11	+	20182555	20182961	True	NM_001111019,NM_001029865	chr11,chr11	+,-	NAV2,DBX1	-137970,-685
chr20:42184100-42186055	chr20	+	42184438	42186103	True	NM_016276,NM_001199264,NM_001008901,NM_170693	chr20,chr20,chr20,chr20	+,+,-,+	SGK2,SGK2,GTSF1L,SGK2	8633,7651,169589,1531
chr9:130741870-130742164	chr9	+	130741958	130742030	True	NM_001035254,NM_001006641	chr9,chr9	-,+	FAM102A,SLC25A25	832,88448
chr1:64247900-64249484	chr1	+	64248037	64249501	True	NM_001083592,NM_014288,NM_005012	chr1,chr1,chr1	+,-,+	ROR1,ITGB3BP,ROR1	-8398,-259202,-8398
chr15:63479611-63480624	chr15	+	63479834	63480657	True	NM_016530,NM_015920	chr15,chr15	+,-	RAB8B,RPS27L	1070,-30093
chr7:139479397-139481079	chr7	+	139479477	139481007	True	NM_001166254,NM_022740,NM_001113239,NM_001130966	chr7,chr7,chr7,chr7	+,-,-,+	TBXAS1,HIPK2,HIPK2,TBXAS1	-1481,-1784,-1784,-1481
chr1:154956909-154958360	chr1	+	154957201	154957343	True	NM_025207,NM_003029,NM_018655,NR_036212,NM_001184892,NM_001184891,NM_201398	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,-,+,+,+,+,+	FLAD1,SHC1,LENEP,MIR4258,FLAD1,FLAD1,FLAD1	-1486,-10242,8718,-9087,-1486,-1486,-1486
chr17:1933685-1934574	chr17	+	1933713	1934361	True	NM_178568,NM_001383	chr17,chr17	-,+	RTN4RL1,DPH1	-5535,-333
chr4:110837356-110837728	chr4	+	110837360	110837724	True	NM_001178131,NM_001178130,NM_001963,NM_000204	chr4,chr4,chr4,chr4	+,+,+,-	EGF,EGF,EGF,CFI	-3371,-3371,-3371,-114025
chrX:67917038-67917600	chrX	+	67917043	67917505	True	NM_001142504,NM_002547	chrX,chrX	+,-	STARD8,OPHN1	-3619,-263744
chr7:105174674-105175767	chr7	+	105174841	105175676	True	NM_021930,NM_019042	chr7,chr7	+,-	RINT1,PUS7	-2368,-12156
chr6:167429152-167430574	chr6	+	167429154	167430432	True	NR_037504,NM_194429	chr6,chr6	-,+	MIR3939,FGFR1OP	-17754,-16389
chr19:37093550-37094579	chr19	+	37093847	37094618	True	NM_001145649,NM_032825,NM_001145650,NR_027239	chr19,chr19,chr19,chr19	-,+,-,-	ZNF529,ZNF382,ZNF529,ZNF529	1610,1602,1610,1610
chr1:13700338-13700972	chr1	+	13700606	13700764	True	NM_001099790,NM_001099850,NM_001099851	chr1,chr1,chr1	-,-,+	PRAMEF19,PRAMEF18,PRAMEF17	-2201,-2201,15323
chr1:13700338-13700972	chr1	+	13479770	13479928	False	NM_001045480,NM_001099790,NM_001099850	chr1,chr1,chr1	+,-,-	PRAMEF16,PRAMEF19,PRAMEF18	15325,-2201,-2201
chr1:203055660-203056000	chr1	+	203055664	203056043	True	NM_015053,NM_002479	chr1,chr1	+,-	PPFIA4,MYOG	-35404,-287
chr19:58738984-58739247	chr19	+	58739121	58739296	True	NM_014480,NM_024620	chr19,chr19	+,-	ZNF544,ZNF329	773,-76973
chr9:94902995-94903483	chr9	+	94903065	94903483	True	NR_015444,NM_178324,NR_027341	chr9,chr9,chr9	+,-,+	LOC100128076,SPTLC1,C9orf44	-8000,-25375,265
chr20:290608-290951	chr20	+	290664	290980	True	NM_033089,NM_153269	chr20,chr20	+,-	ZCCHC3,C20orf96	-12511,-19274
chr19:43382303-43383208	chr19	+	43382646	43383238	True	NM_001184826,NM_006905,NR_036584,NM_001184825	chr19,chr19,chr19,chr19	-,-,+,-	PSG1,PSG1,LOC100289650,PSG1	683,683,-56682,683
chr7:150027911-150028416	chr7	+	150028061	150028447	True	NM_001142928,NM_138434,NM_001164458,NM_023942	chr7,chr7,chr7,chr7	+,+,-,+	LRRC61,C7orf29,ACTR3C,LRRC61	-7816,-1174,-7303,-7816
chr15:90745750-90747064	chr15	+	90745881	90746841	True	NM_198925,NM_006384	chr15,chr15	+,-	SEMA4B,CIB1	-1370,30488
chr14:69680471-69681718	chr14	+	69680831	69681641	True	NM_003861,NR_034165	chr14,chr14	-,+	DCAF5,EXD2	-60917,-22400
chrX:55032804-55033132	chrX	+	55032856	55033146	True	NM_002625,NM_014481	chrX,chrX	-,+	PFKFB1,APEX2	-12345,-6135
chr20:62607835-62608322	chr20	+	62608144	62608370	True	NM_080621,NM_012469,NM_020713	chr20,chr20,chr20	-,+,-	SAMD10,PRPF6,ZNF512B	2675,4060,-6926
chr10:72238869-72239306	chr10	+	72239050	72239350	True	NM_018055,NM_014431	chr10,chr10	-,+	NODAL,KIAA1274	-37585,-537
chr11:67069812-67070231	chr11	+	67069922	67070204	True	NM_021173,NM_017857	chr11,chr11	-,+	POLD4,SSH3	50898,714
chrX:154023962-154024700	chrX	+	154024059	154024346	True	NM_001166462,NR_002984,NM_001166460,NM_001166461,NM_002436	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	MPP1,SNORA56,MPP1,MPP1,MPP1	9506,-20844,9506,9506,9506
chr22:45151229-45151462	chr22	+	45151318	45151384	True	NM_138415,NM_181335,NM_001198726,NM_001017526	chr22,chr22,chr22,chr22	-,+,+,+	PHF21B,ARHGAP8,ARHGAP8,ARHGAP8	254247,-2933,-2933,-2933
chr7:30066621-30067573	chr7	+	30066726	30067595	True	NM_017946,NM_032639,NM_001197026,NM_001197027	chr7,chr7,chr7,chr7	-,+,+,+	FKBP14,PLEKHA8,PLEKHA8,PLEKHA8	-458,381,381,381
chr11:114273420-114274292	chr11	+	114273602	114274313	True	NM_016090,NM_019021	chr11,chr11	+,-	RBM7,C11orf71	-2277,-2463
chr14:105553386-105553775	chr14	+	105553464	105553670	True	NM_174891,NM_013345	chr14,chr14	+,-	C14orf79,GPR132	-100899,-21710
chr2:204197069-204198747	chr2	+	204197496	204198549	True	NM_213589,NM_005759	chr2,chr2	-,+	RAPH1,ABI2	201565,-4549
chr19:12629324-12630496	chr19	+	12630296	12630370	True	NM_153358,NM_144976	chr19,chr19	+,-	ZNF791,ZNF564	91361,32036
chr20:21685840-21686137	chr20	+	21685849	21685997	True	NM_002509,NM_006192	chr20,chr20	-,+	NKX2-2,PAX1	-191185,299
chr9:32524485-32525371	chr9	+	32524485	32525418	True	NM_014314,NR_033991	chr9,chr9	-,+	DDX58,LOC100129250	954,25723
chr20:21115018-21115398	chr20	+	21115032	21115301	True	NM_033176,NM_001163023,NM_001163022,NM_018474	chr20,chr20,chr20,chr20	-,+,+,+	NKX2-4,PLK1S1,PLK1S1,PLK1S1	262805,-8460,-8460,-8460
chr9:70178360-70179389	chr9	+	70178455	70178936	True	NM_001126334,NR_024443	chr9,chr9	-,+	FOXD4L5,LOC100133920	-60,-527145
chr9:70178360-70179389	chr9	-	42717112	42717593	False	NR_026759,NM_199244,NM_001099279	chr9,chr9,chr9	-,+,+	FAM95B1,FOXD4L4,FOXD4L2	315769,60,60
chr9:70178360-70179389	chr9	+	70429371	70429852	False	NM_199244,NM_201453,NM_001099279	chr9,chr9,chr9	-,+,-	FOXD4L4,CBWD3,FOXD4L2	-60,426986,-60
chr6:26034372-26035571	chr6	+	26034568	26035606	True	NM_003537,NM_003531,NM_003544,NM_021062,NM_003513	chr6,chr6,chr6,chr6,chr6	-,+,-,-,-	HIST1H3B,HIST1H3C,HIST1H4B,HIST1H2BB,HIST1H2AB	-2280,10032,-7088,8329,-772
chr12:93860238-93861203	chr12	+	93860367	93861203	True	NM_003348,NM_014050,NM_172177,NM_172178	chr12,chr12,chr12,chr12	-,+,+,+	UBE2N,MRPL42,MRPL42,MRPL42	-24341,66,66,66
chr1:92494120-92494818	chr1	+	92494241	92494869	True	NM_001195684,NM_173567	chr1,chr1	-,+	TGFBR3,EPHX4	-122682,663
chrX:12992730-12993073	chrX	+	12992824	12992990	True	NM_183049,NM_021109,NR_030727	chrX,chrX,chrX	+,+,-	TMSL3,TMSB4X,LOC349408	234,235,-31405
chr3:101406155-101406415	chr3	+	101406175	101406443	True	NR_024407,NM_000986	chr3,chr3	+,-	LOC100009676,RPL24	-10952,-612
chr17:9732236-9733597	chr17	+	9732237	9733475	True	NM_001105571,NM_004246	chr17,chr17	-,+	DHRS7C,GLP2R	-37636,-2907
chr21:26972562-26973139	chr21	+	26972950	26973084	True	NM_017446,NR_030784,NM_080794	chr21,chr21,chr21	-,+,-	MRPL39,MIR155,MRPL39	6775,-26709,6775
chr3:9774299-9775893	chr3	+	9774327	9775929	True	NM_004634,NM_003656,NM_001003694	chr3,chr3,chr3	+,-,+	BRPF1,CAMK1,BRPF1	-950,35789,-950
chr19:51668100-51669286	chr19	+	51668119	51669112	True	NR_002804,NM_145232	chr19,chr19	+,-	SIGLECP3,CTU1	1472,-56472
chr8:135710248-135710677	chr8	+	135710663	135710725	True	NM_001167583,NM_001029939,NR_002438,NM_001174158	chr8,chr8,chr8,chr8	-,-,+,-	ZFAT,ZFAT,ZFAT-AS1,ZFAT	-1862,-1862,-100400,-1862
chr3:178783617-178784405	chr3	+	178783877	178784444	True	NM_152240,NM_022470,NM_006218	chr3,chr3,chr3	-,-,+	ZMAT3,ZMAT3,PIK3CA	5263,5263,81866
chr10:104473995-104474250	chr10	+	104474179	104474241	True	NM_178858,NM_004311	chr10,chr10	+,-	SFXN2,ARL3	56,-1
chr14:23289036-23289730	chr14	+	23289120	23289620	True	NM_181307,NM_181304,NM_003982,NM_181306,NM_181305,NM_180982,NM_001126106,NM_001126105,NM_178336	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,+,-,+,+,+,-,-,+	MRPL52,MRPL52,SLC7A7,MRPL52,MRPL52,MRPL52,SLC7A7,SLC7A7,MRPL52	9471,9471,-4048,9471,9471,9471,-106,-4048,9471
chr14:39639769-39640250	chr14	+	39640107	39640299	True	NM_001079537,NM_177452,NM_002687	chr14,chr14,chr14	-,-,+	TRAPPC6B,TRAPPC6B,PNN	-473,-473,4087
chr22:20006728-20008258	chr22	+	20006814	20007752	True	NM_152906,NM_001670	chr22,chr22	+,-	C22orf25,ARVCF	878,-2505
chr12:113910839-113911786	chr12	+	113910954	113911820	True	NM_022363,NM_138432	chr12,chr12	-,+	LHX5,SDSL	-1077,-50797
chr4:985824-986482	chr4	+	985829	986531	True	NM_022042,NM_000203,NM_134425,NM_213613	chr4,chr4,chr4,chr4	-,+,-,-	SLC26A1,IDUA,SLC26A1,SLC26A1	702,-5095,702,743
chr15:48511461-48512228	chr15	+	48511867	48511959	True	NM_016132,NM_001184832	chr15,chr15	-,+	MYEF2,SLC12A1	-41309,-13432
chr12:110013264-110013840	chr12	+	110013548	110013843	True	NM_001114185,NM_000431,NM_052845	chr12,chr12,chr12	+,+,-	MVK,MVK,MMAB	-2099,-2099,-2190
chr15:40531555-40531769	chr15	+	40531555	40531731	True	NM_020168,NM_001039905	chr15,chr15	+,-	PAK6,C15orf56	303,13429
chr5:77588861-77589824	chr5	+	77589056	77589814	True	NM_003664,NM_004866	chr5,chr5	-,+	AP3B1,SCAMP1	771,66524
chr19:3870847-3871433	chr19	+	3870884	3871445	True	NM_001145640,NM_033064,NM_015174,NR_027149	chr19,chr19,chr19,chr19	-,+,-,-	ZFR2,ATCAY,ZFR2,ZFR2	-1857,9172,-1857,-1857
chr21:39286859-39287130	chr21	+	39286947	39287179	True	NM_002240,NR_026838	chr21,chr21	-,+	KCNJ6,DSCR8	1567,206365
chr15:42642140-42642841	chr15	+	42642140	42642752	True	NM_173087,NM_000070,NM_024344,NM_001110503	chr15,chr15,chr15,chr15	+,+,+,-	CAPN3,CAPN3,CAPN3,TMEM87A	8945,8945,8945,-76385
chr5:138718134-138718436	chr5	+	138718195	138718333	True	NM_001033112,NM_016459,NM_005847,NM_152685	chr5,chr5,chr5,chr5	+,-,-,-	PAIP2,MZB1,SLC23A1,SLC23A1	-40112,7322,756,756
chr18:39583915-39584480	chr18	+	39583961	39584515	True	NM_002647,NR_002838	chr18,chr18	+,-	PIK3C3,KC6	-48821,-483400
chrX:71497163-71497545	chrX	+	71497208	71497434	True	NM_001170747,NM_001007	chrX,chrX	+,-	PIN4,RPS4X	-95733,-67
chr10:6778350-6779416	chr10	+	6778406	6779269	True	NR_036503,NM_006257	chr10,chr10	+,-	LOC439949,PRKCQ	-156077,-156168
chr9:20622265-20622526	chr9	+	20622316	20622534	True	NM_004529,NM_017794	chr9,chr9	-,+	MLLT3,KIAA1797	30,35774
chr9:130713521-130713816	chr9	+	130713625	130713751	True	NM_203305,NM_001006641	chr9,chr9	-,+	FAM102A,SLC25A25	-632,116727
chr9:95046381-95046788	chr9	+	95046472	95046769	True	NR_003704,NM_002161,NR_037424,NM_013417,NM_001012267	chr9,chr9,chr9,chr9,chr9	-,-,-,-,+	SNORA84,IARS,MIR3651,IARS,CENPP	8163,9326,8117,9260,40971
chr7:99723160-99723521	chr7	+	99723165	99723233	True	NM_139315,NM_152755,NM_001190415,NR_033792,NM_203397,NM_005641	chr7,chr7,chr7,chr7,chr7,chr7	-,+,-,-,+,-	TAF6,CNPY4,TAF6,TAF6,MBLAC1,TAF6	-6144,-5951,-5684,-6170,1086,-6170
chr16:25227793-25228707	chr16	+	25228062	25228696	True	NM_001012981,NM_001169	chr16,chr16	-,+	ZKSCAN2,AQP8	40209,-22
chr17:73087261-73087687	chr17	+	73087355	73087725	True	NM_014595,NM_004695	chr17,chr17	-,+	NT5C,SLC16A5	40202,-3351
chr14:92506726-92507623	chr14	+	92506770	92507519	True	NM_004239,NM_017437	chr14,chr14	-,+	TRIP11,CPSF2	-367,80778
chr16:76311793-76312231	chr16	+	76311796	76312272	True	NM_005548,NM_033401	chr16,chr16	-,+	KARS,CNTNAP4	-630211,-678
chr6:4885068-4886211	chr6	+	4885071	4886082	True	NM_001143971,NM_006638	chr6,chr6	+,-	CDYL,RPP40	4143,118241
chr17:77070548-77070860	chr17	+	77070575	77070805	True	NM_138793,NM_001042573	chr17,chr17	-,+	CANT1,ENGASE	-64676,213
chr11:76377678-76378335	chr11	+	76377799	76378331	True	NM_015516,NM_001128922,NM_005512	chr11,chr11,chr11	+,-,-	TSKU,LRRC32,LRRC32	115953,3510,2763
chr7:75681226-75682002	chr7	+	75681225	75681815	True	NM_005918,NM_016086	chr7,chr7	+,-	MDH2,STYXL1	-3892,-3904
chr1:232650531-232650779	chr1	+	232650540	232650800	True	NM_020808,NM_019090	chr1,chr1	-,+	SIPA1L2,KIAA1383	493,289837
chr19:36908733-36908976	chr19	+	36908795	36908859	True	NM_133466,NR_033748	chr19,chr19	-,+	ZFP82,LOC644189	741,3579
chr11:46400820-46401086	chr13	+	44545142	44545192	True	NM_144974,NR_026955	chr13,chr13	-,+	CCDC122,NCRNA00284	-91316,51278
chr16:2963625-2964006	chr16	+	2963624	2963826	True	NM_032296,NM_022119,NM_020912	chr16,chr16,chr16	+,-,+	FLYWCH1,PRSS22,FLYWCH1	-1701,-55453,-1701
chr11:109292488-109292807	chr11	+	109292491	109292743	True	NM_015065,NM_207645	chr11,chr11	-,+	EXPH5,C11orf87	-828117,102
chr12:106638997-106639414	chr12	+	106639035	106639301	True	NM_006825,NM_152772	chr12,chr12	-,+	CKAP4,TCP11L2	2462,57279
chr17:73179245-73179526	chr17	+	73179281	73179545	True	NM_001005849,NM_024844,NM_006937	chr17,chr17,chr17	-,+,-	SUMO2,NUP85,SUMO2	-183,22051,-183
chr6:160146096-160147514	chr6	+	160146150	160147563	True	NM_004906,NM_000636,NM_152857,NM_152858	chr6,chr6,chr6,chr6	+,-,+,+	WTAP,SOD2,WTAP,WTAP	588,-31797,1056,588
chr2:229392758-229393547	chr2	+	229392810	229393507	True	NM_178821,NM_030623	chr2,chr2	+,-	WDR69,SPHKAP	-656534,-346449
chr3:127785725-127786359	chr3	+	127785832	127786394	True	NM_013336,NM_003707	chr3,chr3	+,-	SEC61A1,RUVBL1	-14671,56327
chr12:8117830-8118457	chr12	+	8117948	8118242	True	NM_006931,NM_018416	chr12,chr12	-,+	SLC2A3,FOXJ2	-29056,67116
chr19:18359521-18360072	chr19	+	18359968	18360029	True	NM_000923,NR_036155,NR_036575	chr19,chr19,chr19	-,+,-	PDE4C,MIR3188,LOC729966	-958,32857,6251
chr12:114846215-114846485	chr12	+	114846303	114846483	True	NM_181486,NM_080718,NM_000192,NM_080717,NM_138432	chr12,chr12,chr12,chr12,chr12	-,-,-,-,+	TBX5,TBX5,TBX5,TBX5,SDSL	-2414,-4600,-56,-56,-986138
chr2:120299292-120300409	chr2	+	120299292	120300365	True	NM_001029996,NM_002980	chr2,chr2	+,-	PCDP1,SCTR	1659,-17264
chr14:80669088-80669333	chr14	+	80669133	80669323	True	NM_000793,NM_001018036,NM_013989,NM_001007023	chr14,chr14,chr14,chr14	-,+,-,-	DIO2,TSHR,DIO2,DIO2	9252,752545,9252,8570
chr9:117266487-117266825	chr9	+	117266541	117266871	True	NM_001083885,NM_004888,NM_001173425,NM_015404	chr9,chr9,chr9,chr9	-,+,-,-	DFNB31,ATP6V1G1,DFNB31,DFNB31	-1046,83122,915,915
chr5:114725375-114725759	chr5	+	114725389	114725669	True	NM_001284,NM_001040440	chr5,chr5	+,-	AP3S1,CCDC112	451949,-92931
chr20:30169823-30170110	chr20	+	30169909	30170146	True	NM_001037500,NM_002165	chr20,chr20	-,+	DEFB124,ID1	-109093,22945
chr12:50022764-50024347	chr12	+	50022821	50024245	True	NM_012272,NM_001031698,NM_032130	chr12,chr12,chr12	+,+,-	PRPF40B,PRPF40B,FAM186B	-5469,81,-23388
chr17:28271934-28273749	chr17	+	28271957	28272753	True	NM_198529,NR_026738,NM_033389	chr17,chr17,chr17	+,+,-	EFCAB5,EFCAB5,SSH2	-3392,-3392,-14939
chr17:9547715-9548118	chr17	+	9547770	9548135	True	NM_153210,NR_033656	chr17,chr17	+,-	USP43,STX8	814,-68495
chr2:201390430-201390757	chr2	+	201390502	201390664	True	NM_001160033,NM_152524,NM_152387,NM_001160046	chr2,chr2,chr2,chr2	+,+,-,+	SGOL2,SGOL2,KCTD18,SGOL2	200,200,-15710,200
chr10:100206276-100206490	chr10	+	100206397	100206533	True	NM_182639,NM_014472,NM_000195	chr10,chr10,chr10	-,+,-	HPS1,C10orf28,HPS1	221,-312067,221
chr12:110494248-110495228	chr12	+	110494427	110495207	True	NM_207435,NM_033121	chr12,chr12	-,+	C12orf76,ANKRD13A	10343,-57243
chr1:39408283-39409310	chr1	+	39408420	39409150	True	NM_001136275,NM_017821	chr1,chr1	+,-	AKIRIN1,RHBDL2	47765,-964
chr11:66279324-66280297	chr11	+	66279633	66280130	True	NM_024649,NM_207340	chr11,chr11	+,-	BBS1,ZDHHC24	-1573,33598
chr1:147245757-147246847	chr1	+	147245944	147246872	True	NM_005266,NM_005267	chr1,chr1	-,+	GJA5,GJA8	-460,128073
chr11:118071019-118071312	chr11	+	118071020	118071300	True	NM_153206,NM_000733	chr11,chr11	-,+	AMICA1,CD3E	12824,103994
chr8:22455742-22456034	chr8	+	22455827	22455887	True	NM_001013842,NM_173686,NR_027715,NM_021174,NR_033902,NM_001198827	chr8,chr8,chr8,chr8,chr8,chr8	+,+,-,+,+,+	C8orf58,C8orf58,FLJ14107,KIAA1967,KIAA1967,C8orf58	1226,1226,43885,6651,6257,1226
chr3:129693952-129694309	chr3	+	129693989	129694337	True	NM_001128224,NM_007117	chr3,chr3	-,+	TMCC1,TRH	-81570,-931
chr1:40105677-40106232	chr1	+	40105733	40106267	True	NM_014571,NM_203456	chr1,chr1	-,+	HEYL,PPIE	-385,98249
chr12:11323872-11324185	chr12	+	11324091	11324185	True	NR_036583,NR_037918	chr12,chr12	+,-	LOC100129361,PRH1-PRR4	-362,89
chr20:23732857-23733222	chr20	+	23732936	23733026	True	NM_001898,NR_001279	chr20,chr20	-,+	CST1,CSTT	-1362,-233204
chr5:74331487-74333409	chr5	+	74331632	74333307	True	NM_014886,NM_016591	chr5,chr5	+,-	NSA2,GCNT4	-268580,-4908
chr14:90423812-90424370	chr14	+	90423821	90424357	True	NM_145231,NM_018319,NM_001008744	chr14,chr14,chr14	-,+,+	EFCAB11,TDP1,TDP1	-2732,-1626,-1626
chr9:109937233-109938359	chr9	+	109937242	109938268	True	NM_002874,NR_031752	chr9,chr9	+,-	RAD23B,MIR548Q	107275,-88526
chr3:125802337-125802598	chr3	+	125802351	125802521	True	NM_017836,NM_001008486,NM_001008485,NM_001012337	chr3,chr3,chr3,chr3	-,-,-,+	SLC41A3,SLC41A3,SLC41A3,ROPN1B	663,663,663,-114374
chr8:143278863-143279178	chr8	+	143279023	143279100	True	NM_145003,NR_024378	chr8,chr8	-,+	TSNARE1,NCRNA00051	205494,616
chr2:53996373-53998371	chr2	+	53996622	53998303	True	NM_001201965,NM_001008708	chr2,chr2	-,+	ASB3,CHAC2	15741,-1758
chr1:11753336-11753755	chr1	+	11753353	11753777	True	NM_198545,NM_001127325	chr1,chr1	+,-	C1orf187,MAD2L2	-1623,-1675
chr1:184720928-184722146	chr1	+	184721186	184721992	True	NM_025191,NM_007212	chr1,chr1	-,+	EDEM3,RNF2	2099,292558
chr7:32535115-32535356	chr7	+	32535176	32535312	True	NM_012322,NM_001130710,NR_024466,NM_001139499,NM_015060	chr7,chr7,chr7,chr7,chr7	-,-,-,-,+	LSM5,LSM5,LSM5,LSM5,AVL9	-5153,-306,-4701,-306,-51
chr12:7946828-7948008	chr12	+	7946844	7947878	True	NM_024865,NM_203503	chr12,chr12	+,-	NANOG,CLEC4C	-4900,-44775
chr12:7946828-7948008	chr12	+	8051016	8051066	False	NM_153449,NM_024865	chr12,chr12	-,+	SLC2A14,NANOG	-25521,-109072
chr20:31672747-31673877	chr20	+	31672758	31673922	True	NM_182519,NM_080675	chr20,chr20	+,-	C20orf186,SUN5	-3491,-80519
chr1:171617985-171618789	chr1	+	171618346	171618666	True	NM_001007239,NM_000261	chr1,chr1	+,-	METTL13,MYOC	132094,3157
chr15:57664512-57664998	chr15	+	57664516	57664818	True	NM_032866,NR_015419	chr15,chr15	+,-	CGNL1,LOC145783	3886,-453819
chr6:114289936-114291417	chr6	+	114289966	114291332	True	NM_001527,NR_027060,NR_033441	chr6,chr6,chr6	-,+,-	HDAC2,FLJ34503,HDAC2	1077,-64466,1077
chr1:116914884-116915294	chr1	+	116914998	116915252	True	NR_024126,NM_000701,NM_001160233	chr1,chr1,chr1	-,+,+	ATP1A1OS,ATP1A1,ATP1A1	45979,542,1236
chr6:37399887-37400846	chr6	+	37400029	37400790	True	NM_015050,NM_138493	chr6,chr6	+,-	FTSJD2,C6orf129	116,66967
chr10:12085395-12085954	chr10	+	12085401	12086003	True	NM_018706,NM_080599,NM_015542	chr10,chr10,chr10	+,-,-	DHTKD1,UPF2,UPF2	24930,-378,-593
chr1:936269-936513	chr1	+	936275	936479	True	NM_005101,NM_021170,NM_001142467	chr1,chr1,chr1	+,-,-	ISG15,HES4,HES4	12367,-723,-723
chr19:54617162-54617584	chr19	+	54617394	54617580	True	NM_013342,NM_015629	chr19,chr19	-,+	TFPT,PRPF31	1525,1209
chr19:12268617-12268858	chr19	+	12268718	12268793	True	NM_003437,NR_037801,NR_037802,NM_145233	chr19,chr19,chr19,chr19	+,-,-,-	ZNF136,ZNF625,ZNF625-ZNF20,ZNF625	5078,-1172,-1172,-1172
chr2:215898587-215900247	chr2	+	215898894	215900121	True	NM_004044,NM_015657	chr2,chr2	+,-	ATIC,ABCA12	276557,-2084
chr10:103878952-103879296	chr10	+	103878964	103879311	True	NM_001113407,NM_015062,NM_003893	chr10,chr10,chr10	-,+,-	LDB1,PPRC1,LDB1	949,13475,-4241
chr19:58100679-58101759	chr19	+	58100803	58101689	True	NM_020880,NM_001010879,NM_017879	chr19,chr19,chr19	+,+,-	ZNF530,ZIK1,ZNF416	9563,-5233,-10560
chr12:106753400-106755123	chr12	+	106753617	106755158	True	NM_018082,NM_001160708,NM_006825	chr12,chr12,chr12	+,+,-	POLR3B,POLR3B,CKAP4	-2232,-1808,-111904
chr14:24699663-24699982	chr14	+	24699754	24699823	True	NM_006156,NM_001002001,NM_001002000,NM_001199823,NM_016576,NM_001002002	chr14,chr14,chr14,chr14,chr14,chr14	-,+,+,-,+,+	NEDD8,GMPR2,GMPR2,NEDD8-MDP1,GMPR2,GMPR2	1808,1824,1824,1808,2279,2279
chr13:44361811-44362686	chr13	+	44361817	44362567	True	NM_017993,NM_001128303	chr13,chr13	-,+	ENOX1,C13orf31	-711,90852
chr17:37762313-37762693	chr17	+	37762325	37762551	True	NM_032192,NM_006160	chr17,chr17	+,-	PPP1R1B,NEUROD2	20627,1674
chr19:35068619-35069238	chr19	+	35068803	35069191	True	NR_027620,NM_001080436	chr19,chr19	-,+	LOC643719,WTIP	-207,-95974
chr19:47525969-47526384	chr19	+	47525977	47526432	True	NM_002517,NM_017854	chr19,chr19	+,-	NPAS1,TMEM160	-1898,25500
chr10:6374041-6375299	chr10	+	6374152	6375036	True	NM_004566,NM_006257	chr10,chr10	+,-	PFKFB3,PRKCQ	-129376,247252
chr9:35812304-35813074	chr9	+	35812331	35813051	True	NM_016446,NM_001039592,NM_032593,NM_172312	chr9,chr9,chr9,chr9	+,-,-,-	TMEM8B,SPAG8,HINT2,SPAG8	16170,-72,2041,-72
chr10:99893502-99894011	chr10	+	99893780	99894047	True	NM_014472,NM_018058	chr10,chr10	+,-	C10orf28,CRTAC1	333,-103195
chr20:44659363-44659597	chr20	+	44659367	44659547	True	NM_001134771,NM_022095,NM_020708	chr20,chr20,chr20	+,-,+	SLC12A5,ZNF335,SLC12A5	-9089,-58534,-1597
chr10:133748626-133749421	chr10	+	133748718	133749294	True	NM_018461,NM_004052,NR_033191	chr10,chr10,chr10	+,-,+	PPP2R2D,BNIP3,PPP2R2D	-810,46193,-810
chr3:101395259-101395491	chr3	+	101395346	101395502	True	NR_024407,NM_014415	chr3,chr3	+,-	LOC100009676,ZBTB11	-123,536
chr6:33754165-33755445	chr6	+	33754259	33755479	True	NM_001143944,NM_002224,NM_181336	chr6,chr6,chr6	-,+,-	LEMD2,ITPR3,LEMD2	2,-165155,1477
chrX:101723461-101724085	chrX	+	101723575	101724096	True	NM_017809,NR_002216,NM_001099686	chrX,chrX,chrX	-,+,-	NXF2,NXF4,NXF2B	2697,80796,2697
chrX:101723461-101724085	chrX	-	101472915	101473436	False	NM_001012978,NM_017809,NM_001099686	chrX,chrX,chrX	-,+,+	BEX5,NXF2,NXF2B	-61929,-2697,-2697
chr2:31363081-31364466	chr2	+	31363183	31364493	True	NM_014600,NM_024572	chr2,chr2	+,-	EHD3,GALNT14	92386,-1612
chr20:58631181-58632595	chr20	+	58631198	58632451	True	NM_173644,NM_006242	chr20,chr20	+,-	C20orf197,PPP1R3D	-269,-115846
chr1:33841015-33841726	chr1	+	33841090	33841612	True	NM_145238,NM_198040	chr1,chr1	+,-	ZSCAN20,PHC2	96619,-14
chr5:175792121-175792354	chr5	+	175792125	175792239	True	NM_173664,NM_001079685,NM_001079684,NM_020444	chr5,chr5,chr5,chr5	+,-,-,-	ARL10,KIAA1191,KIAA1191,KIAA1191	262,-3316,-3316,-3316
chr20:26093383-26093627	chr20	+	26093607	26093668	True	NR_003678,NR_026713	chr20,chr20	-,+	C20orf191,FAM182A	1060,-58415
chr1:62660189-62660433	chr1	+	62660188	62660438	True	NM_181712,NM_001164835,NM_019079	chr1,chr1,chr1	-,+,+	KANK4,L1TD1,L1TD1	124695,35,35
chr19:36266711-36266945	chr19	+	36266757	36266945	True	NM_052948,NM_144617,NM_001172630	chr19,chr19,chr19	+,-,+	ARHGAP33,HSPB6,ARHGAP33	-391,-18827,-391
chr6:160107859-160108371	chr6	+	160107919	160108229	True	NM_001024466,NM_001024465,NM_152858,NM_000636	chr6,chr6,chr6,chr6	-,-,+,-	SOD2,SOD2,WTAP,SOD2	6180,6180,39922,6180
chr9:112183010-112183806	chr9	+	112183050	112183798	True	NM_001145371,NM_001037293,NR_026918,NM_001145372	chr9,chr9,chr9,chr9	-,+,-,-	PTPN3,PALM2,PTPN3,PTPN3	7575,219269,-2987,7575
chr3:49208685-49209006	chr3	+	49208765	49208909	True	NM_173546,NM_022903	chr3,chr3	+,-	KLHDC8B,CCDC71	108,-4980
chr14:24603798-24604166	chr14	+	24603884	24604000	True	NM_016049,NM_006263,NM_176783,NM_203402	chr14,chr14,chr14,chr14	-,+,+,+	FAM158A,PSME1,PSME1,FITM1	6857,1377,1377,-3271
chrX:18466165-18466564	chrX	+	18466194	18466592	True	NM_001037343,NR_033717	chrX,chrX	+,-	CDKL5,SCML2	-5909,-93350
chr8:28559957-28560635	chr8	+	28560138	28560683	True	NM_001172562,NM_001440	chr8,chr8	-,+	INTS9,EXTL3	186799,-1037
chr1:116950286-116950763	chr1	+	116950431	116950799	True	NR_024126,NM_001160234	chr1,chr1	-,+	ATP1A1OS,ATP1A1	10432,-24491
chr1:57430833-57431584	chr1	+	57430912	57431546	True	NM_000562,NM_000066	chr1,chr1	+,-	C8A,C8B	-110520,192
chr4:158158638-158159253	chr4	+	158158830	158159309	True	NR_036641,NM_001083620	chr4,chr4	-,+	PDGFC,GRIA2	-266284,-17075
chr20:11870815-11871143	chr20	+	11870814	11871171	True	NM_181443,NM_000214	chr20,chr20	+,-	BTBD3,JAG1	305,-1216120
chr19:42258993-42260846	chr19	+	42259055	42260671	True	NM_002483,NM_006890	chr19,chr19	+,-	CEACAM6,CEACAM7	-138,-66959
chr19:41098106-41098869	chr19	+	41098171	41098902	True	NM_001042544,NM_003573,NM_004756,NM_001042545	chr19,chr19,chr19,chr19	+,+,-,+	LTBP4,LTBP4,NUMBL,LTBP4	4238,169,97704,8374
chr14:23451890-23452116	chr14	+	23451895	23452165	True	NM_001099780,NM_198086,NM_032876	chr14,chr14,chr14	+,-,-	PSMB11,JUB,JUB	59210,-5463,-47
chr20:25227975-25228235	chr20	+	25228002	25228284	True	NR_027091,NM_002862	chr20,chr20	-,+	LOC284798,PYGB	-98576,421
chrY:14467919-14468696	chrY	+	14468050	14468649	True	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	305648,64791
chr5:145215068-145215627	chr5	+	145215189	145215667	True	NM_205846,NM_182960,NM_138492,NM_152550	chr5,chr5,chr5,chr5	-,-,-,+	PRELID2,PRELID2,PRELID2,SH3RF2	-322,-322,-290,100458
chr6:7390272-7390662	chr6	+	7390368	7390682	True	NM_205864,NM_031480,NM_001170692,NM_001170693	chr6,chr6,chr6,chr6	-,+,-,-	CAGE1,RIOK1,CAGE1,CAGE1	-426,-357,-426,-426
chr9:26958044-26959197	chr9	+	26958188	26959057	True	NM_001099224,NM_001031689,NM_025103	chr9,chr9,chr9	+,-,+	IFT74,PLAA,IFT74	-1881,-10720,-1881
chr5:158613115-158614494	chr5	+	158613331	158613803	True	NM_145049,NM_001199382	chr5,chr5	+,-	UBLCP1,RNF145	76285,20916
chr14:93215076-93216900	chr14	+	93215239	93216332	True	NM_005606,NM_005113,NM_001008530	chr14,chr14,chr14	-,+,-	LGMN,GOLGA5,LGMN	-192,44317,-192
chr1:28881127-28882657	chr1	+	28881380	28882281	True	NM_017846,NR_003109,NR_003077	chr1,chr1,chr1	+,+,-	TRNAU1AP,TRNAU1AP,SNORD99	-1903,-1903,23106
chr12:4705296-4705731	chr12	+	4705302	4705768	True	NM_006422,NM_003845	chr12,chr12	-,+	AKAP3,DYRK4	48625,-6109
chr1:161359793-161360082	chr1	+	161360054	161360128	True	NM_001013625,NM_003001	chr1,chr1	-,+	C1orf192,SDHC	-22390,-75939
chr19:4460004-4460315	chr19	+	4460186	4460251	True	NM_025241,NM_001171091,NM_001001520	chr19,chr19,chr19	-,-,+	UBXN6,UBXN6,HDGFRP2	-2395,-4891,12003
chr5:137364845-137366595	chr5	+	137364923	137366323	True	NR_037900,NM_001101801,NM_001101800,NM_016603	chr5,chr5,chr5,chr5	+,-,-,-	LOC100130172,FAM13B,FAM13B,FAM13B	2139,2535,2535,2535
chr19:3931336-3932832	chr19	+	3931407	3931909	True	NM_170678,NR_030367	chr19,chr19	+,-	ITGB1BP3,MIR637	1191,29651
chr22:24308914-24309221	chr22	+	24308917	24309151	True	NM_000854,NM_001080843,NM_001084393,NM_001084392	chr22,chr22,chr22,chr22	-,-,+,-	GSTT2,GSTT2B,DDTL,DDT	-5524,-5549,-2,7579
chr22:24308914-24309221	chr22	-	24316554	24316788	False	NM_001084393,NM_001355,NM_000854,NM_001084392	chr22,chr22,chr22,chr22	+,-,+,-	DDTL,DDT,GSTT2,DDT	-7579,5281,5525,2
chr4:99917512-99918023	chr4	+	99917585	99917971	True	NR_037455,NM_015143,NM_001968	chr4,chr4,chr4	+,+,-	MIR3684,METAP1,EIF4E	566,-848,-65799
chr5:38455139-38455355	chr5	+	38455148	38455354	True	NM_001127671,NM_182801	chr5,chr5	-,+	LIFR,EGFLAM	101444,-9564
chr14:23835790-23837154	chr14	+	23836114	23836968	True	NM_032459,NM_022789,NM_172314,NM_001037288,NM_138460,NM_005864	chr14,chr14,chr14,chr14,chr14,chr14	-,+,+,+,+,-	EFS,IL25,IL25,CMTM5,CMTM5,EFS	-1272,5101,5049,9048,9048,-1272
chr1:48344699-48345729	chr1	+	48344796	48345667	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	116945,342689
chr12:13045594-13045879	chr12	+	13045597	13045773	True	NM_018654,NM_003979	chr12,chr12	-,+	GPRC5D,GPRC5A	57595,-1692
chr17:60444550-60446317	chr17	+	60444812	60445952	True	NR_027486,NM_001144933	chr17,chr17	-,+	TBC1D3P2,EFCAB3	-91796,1626
chr17:46804574-46805552	chr17	+	46804700	46805578	True	NR_036150,NR_024103,NM_032391,NM_006361	chr17,chr17,chr17,chr17	-,+,-,-	MIR3185,NCRNA00253,PRAC,HOXB13	-2863,-4209,-4818,583
chr13:49795606-49796151	chr13	+	49795660	49796176	True	NM_030925,NM_001507	chr13,chr13	-,+	CAB39L,MLNR	179609,-1237
chr15:34824994-34825974	chr15	+	34825054	34825787	True	NR_036050,NM_175741,NM_001023567,NR_036261	chr15,chr15,chr15,chr15	-,+,-,-	MIR1233-1,C15orf55,GOLGA8B,MIR1233-2	-4482,-187039,2492,-4482
chr15:34824994-34825974	chr15	+	34678833	34679566	False	NM_175741,NR_036050,NM_181077,NR_036261	chr15,chr15,chr15,chr15	+,-,-,-	C15orf55,MIR1233-1,GOLGA8A,MIR1233-2	-40818,-4482,2492,-4482
chr6:144165327-144165684	chr6	+	144165344	144165718	True	NM_001080952,NM_032860	chr6,chr6	-,+	PLAGL1,LTV1	163873,-894
chr18:24411934-24413188	chr18	+	24411934	24413208	True	NM_004028,NR_026908	chr18,chr18	-,+	AQP4,C18orf16	29417,32063
chr4:102712145-102712395	chr4	+	102712158	102712445	True	NM_001130692,NM_001127507,NM_017935	chr4,chr4,chr4	-,+,+	PPP3CA,BANK1,BANK1	-443530,-445,-445
chr11:44332126-44332602	chr11	+	44332326	44332537	True	NM_021926,NM_000401	chr11,chr11	-,+	ALX4,EXT2	-610,-214630
chrX:47419773-47420466	chrX	+	47419869	47420511	True	NM_001654,NM_006950	chrX,chrX	+,-	ARAF,SYN1	4,58795
chr17:7590937-7591669	chr17	+	7590976	7591676	True	NM_001143992,NM_001143991,NM_001143990,NM_018081,NM_000546,NM_001126114,NM_001126112,NM_001126113	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,-,-,-,-	WRAP53,WRAP53,WRAP53,WRAP53,TP53,TP53,TP53,TP53	-10,-269,-1638,-10,-113,-113,-113,-113
chr7:148288118-148288795	chr7	+	148288176	148288678	True	NM_145304,NM_001203249	chr7,chr7	+,-	C7orf33,EZH2	-577,291973
chrX:120008791-120009175	chrX	+	120008909	120009197	True	NM_012084,NM_001145718	chrX,chrX	+,-	GLUD2,CT47B1	172264,632
chr16:77822648-77822899	chr16	+	77822764	77822840	True	NM_020927,NM_199355	chr16,chr16	+,-	VAT1L,ADAMTS18	-332,-353753
chr9:33798670-33799183	chr9	+	33798676	33799232	True	NM_002771,NR_023917	chr9,chr9	+,-	PRSS3,PTENP1	-3168,-121258
chr18:13713023-13713932	chr18	+	13713026	13713953	True	NM_001098801,NM_003799	chr18,chr18	-,+	C18orf19,RNMT	12691,12750
chr10:98342759-98344377	chr10	+	98342883	98344116	True	NM_020123,NM_001170765	chr10,chr10	-,+	TM9SF3,LCOR	2749,247900
chr3:8775514-8776112	chr3	+	8775578	8775988	True	NM_033337,NM_000916,NM_001234	chr3,chr3,chr3	+,-,+	CAV3,OXTR,CAV3	-143,35362,-133
chr10:42975800-42977554	chr10	+	42976220	42977054	True	NR_026777,NR_026827	chr10,chr10	-,+	ZNF37BP,LOC84856	71276,-5332
chr15:90117541-90117744	chr15	+	90117635	90117754	True	NM_152259,NR_027077	chr15,chr15	+,-	C15orf42,LOC283761	1063,-50370
chr17:42462214-42462572	chr17	+	42462368	42462554	True	NM_000419,NM_002087	chr17,chr17	-,+	ITGA2B,GRN	4369,-39928
chr19:48948421-48948862	chr19	+	48948463	48948803	True	NM_006801,NM_013348,NM_031485	chr19,chr19,chr19	-,+,+	KDELR1,KCNJ14,GRWD1	-53653,9962,226
chr2:44694-45446	chr2	+	44701	45361	True	NM_001077710,NM_001040649	chr2,chr2	-,+	FAM110C,ACP1	1277,219507
chrX:109529980-109530915	chrX	+	109530110	109530949	True	NM_020769,NM_001025580	chrX,chrX	+,-	RGAG1,AMMECR1	131335,30486
chr17:45088109-45088478	chr17	+	45088289	45088507	True	NM_203400,NM_054022	chr17,chr17	-,+	RPRML,GOSR2	-31675,-87858
chr21:43493458-43494228	chr21	+	43493485	43494089	True	NM_173568,NR_027243,NM_001004416	chr21,chr21,chr21	+,-,+	UMODL1,C21orf128,UMODL1	-2110,34605,-2110
chr16:14916781-14917758	chr16	+	14916912	14917798	True	NR_023387,NM_014287	chr16,chr16	-,+	ABCC6P2,NOMO1	811,9844
chr16:14916781-14917758	chr16	-	18583325	18584211	False	NR_003569,NM_173614,NM_001004060	chr16,chr16,chr16	+,-,-	ABCC6P1,NOMO2,NOMO2	-806,-9891,-9891
chr16:14916781-14917758	chr16	+	16315675	16316563	False	NM_001171,NM_001079528,NM_001004067	chr16,chr16,chr16	-,-,+	ABCC6,ABCC6,NOMO3	815,815,9825
chr11:130299296-130300884	chr11	+	130299348	130300698	True	NM_007037,NM_139055	chr11,chr11	-,+	ADAMTS8,ADAMTS15	-809,18170
chr14:103675484-103677106	chr14	+	103675872	103676790	True	NR_033938,NM_006291	chr14,chr14	-,+	LOC100131366,TNFAIP2	-20507,-83259
chr10:85937431-85938811	chr10	+	85937440	85938854	True	NM_001017924,NM_207373	chr10,chr10	-,+	LRIT2,C10orf99	46480,-3937
chr11:66673267-66673978	chr11	+	66673459	66673865	True	NM_024036,NM_022172	chr11,chr11	+,-	LRFN4,PC	-48636,1525
chr13:103540966-103541874	chr13	+	103541486	103541925	True	NM_024089,NR_026965	chr13,chr13	-,+	KDELC1,LOC121952	-90082,-9101
chr2:61767491-61769005	chr2	+	61767911	61769019	True	NM_152392,NM_003400,NM_152516	chr2,chr2,chr2	+,-,+	AHSA2,XPO1,COMMD1	-363419,-2493,363783
chr11:120079881-120080565	chr11	+	120079908	120080587	True	NM_012101,NM_178507	chr11,chr11	-,+	TRIM29,OAF	-71045,1159
chr1:235185104-235186617	chr1	+	235185340	235186626	True	NM_001037277,NR_002956	chr1,chr1	+,-	GGPS1,SNORA14B	305126,104676
chr15:32937525-32938112	chr15	+	32937543	32937896	True	NM_003020,NR_036650,NM_001144757	chr15,chr15,chr15	+,-,+	SCG5,LOC100288615,SCG5	-3731,-111601,-3731
chr11:59271824-59272295	chr11	+	59271885	59272001	True	NM_001001954,NM_001004706	chr11,chr11	-,+	OR5A2,OR4D11	-81459,-887
chr19:38896265-38896587	chr19	+	38896346	38896490	True	NM_152657,NM_174905	chr19,chr19	-,+	GGN,FAM98C	-17678,-2622
chr2:171785364-171785595	chr2	+	171785373	171785513	True	NM_015530,NM_001136555,NM_001201428	chr2,chr2,chr2	+,-,+	GORASP2,TLK1,GORASP2	-388,138020,-476
chr11:67223161-67223824	chr11	+	67223179	67223840	True	NM_145200,NM_206997	chr11,chr11	+,-	CABP4,GPR152	-412,-2979
chr3:49228260-49229103	chr3	+	49228470	49229137	True	NM_001080528,NM_178173,NM_001135197	chr3,chr3,chr3	-,+,+	LOC646498,CCDC36,CCDC36	205,6723,7795
chr5:1293138-1293587	chr5	+	1293192	1293316	True	NM_182632,NM_001193376,NM_198253	chr5,chr5,chr5	+,-,-	SLC6A18,TERT,TERT	-67773,1896,1896
chr2:145276070-145276606	chr2	+	145276096	145276623	True	NR_033258,NM_001171653,NR_033870,NM_014795	chr2,chr2,chr2,chr2	-,-,+,-	ZEB2,ZEB2,DKFZp686O1327,ZEB2	1392,1392,148910,1392
chrX:9986561-9986854	chrX	+	9986560	9986678	True	NM_015691,NM_000273	chrX,chrX	+,-	WWC3,GPR143	-2822,-252555
chr11:122754049-122754680	chr11	+	122754128	122754700	True	NM_024806,NM_001098169,NM_199124	chr11,chr11,chr11	+,-,+	C11orf63,BSX,C11orf63	-706,97733,-706
chrX:33132523-33133787	chrX	+	33132846	33133478	True	NM_004010,NM_152631	chrX,chrX	-,+	DMD,FAM47B	13118,1827434
chr14:66975638-66975852	chr14	+	66975655	66975842	True	NM_015994,NM_001024218,NM_020806	chr14,chr14,chr14	-,+,+	ATP6V1D,GPHN,GPHN	850928,-1581,-1581
chr5:140797537-140797824	chr5	+	140797579	140797872	True	NM_032091,NM_032090,NM_018927,NM_032092,NM_005642,NM_032101,NM_018926,NM_032100,NM_018914,NR_001297,NM_018913	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,-,+,+,+,+,+,+	PCDHGA11,PCDHGA10,PCDHGB7,PCDHGA11,TAF7,PCDHGB7,PCDHGB6,PCDHGB6,PCDHGA11,PCDHGB8P,PCDHGA10	2664,-4887,-370,2664,-97228,-416,-9860,-9860,2664,7980,-4887
chr5:140797537-140797824	chr5	+	140788048	140788109	False	NM_032090,NM_032101,NM_032100,NM_018921,NM_032089,NM_018927,NM_018926,NM_005642,NM_018913	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,+,-,+	PCDHGA10,PCDHGB7,PCDHGB6,PCDHGA9,PCDHGA9,PCDHGB7,PCDHGB6,TAF7,PCDHGA10	4633,9104,-340,-5590,-5590,9150,-340,-87697,4633
chr16:3093305-3095115	chr16	+	3093600	3094559	True	NM_001103175,NM_022468	chr16,chr16	-,+	CCDC64B,MMP25	-8058,2122
chr11:63257748-63258102	chr11	+	63257763	63258089	True	NM_054108,NM_001146729,NM_001146728,NM_001142535	chr11,chr11,chr11,chr11	-,-,-,+	HRASLS5,HRASLS5,HRASLS5,LGALS12	641,641,641,15434
chr8:125550925-125551172	chr8	+	125550931	125551205	True	NM_001146160,NR_027427,NM_005005,NM_032026	chr8,chr8,chr8,chr8	-,-,+,-	TATDN1,TATDN1,NDUFB9,TATDN1	174,174,137,174
chr17:43484504-43485996	chr17_ctg5_hap1	+	99817	101132	False	NM_001159330,NM_001113738	chr17_ctg5_hap1,chr17_ctg5_hap1	-,+	ARHGAP27,ARL17A	-1232,94588
chr17:43484504-43485996	chr17	+	43484681	43485996	True	NM_001159330,NR_024435	chr17,chr17	-,+	ARHGAP27,LOC100133991	-1232,-145174
chr11:124796495-124796923	chr11	+	124796512	124796760	True	NM_152722,NM_001037558	chr11,chr11	-,+	HEPACAM,HEPN1	9600,-7417
chr18:72172701-72173459	chr18	+	72172850	72173326	True	NM_018235,NM_001044369,NM_001168499	chr18,chr18,chr18	+,-,+	CNDP2,FAM69C,CNDP2	-9408,-48347,-6085
chr14:98444454-98444905	chr14	+	98444497	98444882	True	NR_015430,NM_182560	chr14,chr14	-,+	C14orf64,C14orf177	-36,733067
chr5:50679002-50679322	chr5	+	50679045	50679353	True	NM_198449,NM_002202	chr5,chr5	-,+	EMB,ISL1	-941811,-138
chr17:27051888-27052658	chr17	+	27051919	27052655	True	NM_001144942,NR_024575,NR_024579,NM_001144943,NM_000984,NR_000014,NM_178170,NM_031934,NR_000010,NR_000013,NM_138463,NM_001142625,NM_001160407,NM_001142624,NR_000009	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,+,+,+,-,+,+,-,-,-,-,+	RAB34,RAB34,RAB34,RAB34,RPL23A,SNORD42A,NEK8,RAB34,SNORD4A,SNORD42B,TLCD1,RAB34,TLCD1,RAB34,SNORD4B	-7011,-6668,-6668,-6633,-4970,-1523,3176,-7011,-2370,-4402,625,-6633,1344,-6633,-1271
chr12:133612808-133613256	chr12	+	133612848	133613152	True	NM_003428,NM_001164715,NM_001127372	chr12,chr12,chr12	+,-,+	ZNF84,ZNF605,ZNF84	725,-79956,827
chr12:130999005-130999512	chr12	+	130999102	130999370	True	NM_004764,NM_015347	chr12,chr12	+,-	PIWIL1,RIMBP2	-176720,3090
chr15:85145475-85146521	chr15	+	85145743	85146512	True	NM_017894,NM_001007072,NM_181877,NR_003661	chr15,chr15,chr15,chr15	+,+,+,-	ZSCAN2,ZSCAN2,ZSCAN2,UBE2Q2P1	-1550,-1550,-1550,-31717
chr10:45473256-45473466	chr10	+	45473316	45473508	True	NM_007021,NM_032023	chr10,chr10	-,+	C10orf10,RASSF4	872,-18148
chr1:157104816-157105270	chr1	+	157104818	157105296	True	NM_001145312,NR_001560,NM_005240	chr1,chr1,chr1	-,+,-	ETV3,CYCSP52,ETV3	3137,-6715,2931
chr2:33818190-33819587	chr2	+	33818477	33819361	True	NM_015475,NM_015376	chr2,chr2	-,+	FAM98A,RASGRP3	5065,-79592
chr1:204134392-204134809	chr1	+	204134419	204134712	True	NM_005686,NM_000537	chr1,chr1	+,-	SOX13,REN	-92224,804
chr19:30204275-30205782	chr19	+	30204338	30205502	True	NM_001031726,NM_024310,NM_031448	chr19,chr19,chr19	-,+,-	C19orf12,PLEKHF1,C19orf12	511,-48062,1000
chr10:111966031-111967165	chr10	+	111966045	111967206	True	NM_001008541,NM_005871,NM_130439	chr10,chr10,chr10	+,-,+	MXI1,SMNDC1,MXI1	2782,97552,156
chr15:34637141-34638802	chr15	+	34637399	34638801	True	NM_133647,NM_018648,NM_001042497,NM_175741,NM_001042495,NM_001042496,NM_001042494	chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,-,+,-,-,-	SLC12A6,NOP10,SLC12A6,C15orf55,SLC12A6,SLC12A6,SLC12A6	-8354,-2037,-8354,-43,-7134,-7438,-7438
chr14:105636198-105636573	chr14	+	105636344	105636602	True	NM_033271,NM_145159,NM_002226	chr14,chr14,chr14	+,-,-	BTBD6,JAG2,JAG2	78276,-1183,-1183
chr5:126626083-126626326	chr5	+	126626089	126626363	True	NM_032446,NM_001164478	chr5,chr5	+,-	MEGF10,FLJ44606	92,-216905
chr4:140223494-140224873	chr4	+	140223549	140224353	True	NM_001184987,NM_001184986,NM_001184990,NM_001184991,NM_001184989,NM_001184988,NM_057175,NM_002494	chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4	-,-,-,-,-,-,+,-	NDUFC1,NDUFC1,NDUFC1,NDUFC1,NDUFC1,NDUFC1,NAA15,NDUFC1	-18,-1185,-18,-1185,-18,-18,-927,-1161
chr14:53198652-53198911	chr14	+	53198870	53198938	True	NM_014584,NM_001130701,NM_145251	chr14,chr14,chr14	-,+,+	ERO1L,STYX,STYX	-36451,-2038,-2038
chr2:25196630-25198590	chr2	+	25196758	25198542	True	NM_016544,NM_001198559,NR_034113	chr2,chr2,chr2	-,-,+	DNAJC27,DNAJC27,LOC729723	-1795,-1795,-1835
chr10:51839990-51841159	chr10	+	51840129	51841128	True	NM_018232,NM_001143974	chr10,chr10	+,-	FAM21B,ASAH2	-2294,167292
chr10:51839990-51841159	chr10	+	46235132	46236131	False	NM_174890,NM_015262	chr10,chr10	-,+	ANUBL1,FAM21C	-66881,-12535
chr10:51839990-51841159	chr10	+	47896267	47897266	False	NM_018232,NM_002900	chr10,chr10	+,-	FAM21B,RBP3	-2295,493775
chrX:51485701-51486446	chrX	+	51485800	51486415	True	NR_033773,NM_018094	chrX,chrX	-,+	LOC441495,GSPT2	-60353,65
chr17:11903701-11904666	chr17	+	11903892	11904642	True	NM_144680,NM_003010	chr17,chr17	-,+	ZNF18,MAP2K4	-3203,19492
chr19:6140363-6140582	chr19	+	6140363	6140534	True	NM_134433,NM_030924	chr19,chr19	-,+	RFX2,ACSBG2	-29699,-4704
chr3:148449504-148450618	chr3	+	148449716	148450488	True	NM_003071,NM_032049	chr3,chr3	-,+	HLTF,AGTR1	353916,-1805
chr18:10459068-10460777	chr18	+	10459155	10460818	True	NM_153000,NM_022068	chr18,chr18	+,-	APCDD1,FAM38B	-4581,687993
chr18:74239947-74240986	chr18	+	74239991	74240956	True	NR_015417,NM_014643	chr18,chr18	+,-	LOC284276,ZNF516	7,-32845
chr1:110167974-110168420	chr1	+	110167989	110168451	True	NM_139156,NM_005272,NM_203404,NM_004037	chr1,chr1,chr1,chr1	+,-,+,+	AMPD2,GNAT2,AMPD2,AMPD2	-5581,-12284,5,-4764
chr12:56695714-56697551	chr12	+	56695751	56697537	True	NM_004077,NM_001099337,NM_016584	chr12,chr12,chr12	-,+,+	CS,COQ10A,IL23A	-1576,-34742,35125
chr2:220145862-220146470	chr2	+	220145954	220146478	True	NM_001039550,NR_029688,NM_006736	chr2,chr2,chr2	+,-,+	DNAJB2,MIR153-1,DNAJB2	-1965,12494,-1965
chr8:27692130-27693227	chr8	+	27692575	27692985	True	NM_001017420,NM_018492	chr8,chr8	+,-	ESCO2,PBK	-60577,2418
chr11:47281294-47282355	chr11	+	47281638	47282362	True	NM_130472,NM_130473,NM_130470,NM_130471,NM_130476,NM_130474,NM_130475,NM_003682,NM_001131064,NM_001135943,NM_001130101,NM_001135944,NM_005693	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,+,+,+,-,+,+,+,+	MADD,MADD,MADD,MADD,MADD,MADD,MADD,MADD,ACP2,MADD,NR1H3,MADD,NR1H3	8836,8836,8564,8836,9308,8836,9308,8836,-11181,9308,-2200,8836,-2200
chr6:36410992-36411214	chr6	+	36411038	36411262	True	NM_173562,NM_152990	chr6,chr6	+,-	KCTD20,PXT1	-545,-372
chr15:40078432-40078790	chr15	+	40078445	40078775	True	NM_001013703,NM_152597	chr15,chr15	+,-	EIF2AK4,FSIP1	147571,-3406
chr1:99127639-99128100	chr1	+	99127711	99128041	True	NM_001010861,NR_033716,NM_152238,NM_015976	chr1,chr1,chr1,chr1	-,+,+,+	LPPR5,SNX7,SNX7,SNX7	342458,-526,-526,-526
chr1:147430150-147430614	chr1	+	147430350	147430426	True	NR_003377,NM_001097616	chr1,chr1	-,+	PDZK1P1,GPR89C	53963,-4847
chr1:147430150-147430614	chr1	+	145888651	145888727	False	NR_003377,NM_001097616	chr1,chr1	-,+	PDZK1P1,GPR89C	53950,-4847
chrX:117958594-117959239	chrX	+	117958634	117959255	True	NM_173798,NM_020721	chrX,chrX	+,-	ZCCHC12,KIAA1210	-900,325337
chrX:48981860-48982674	chrX	+	48982396	48982548	True	NM_001099681,NM_015698	chrX,chrX	+,-	MAGIX,GPKOW	36632,-2317
chr11:61526163-61526556	chr11	+	61526178	61526522	True	NR_026882,NM_013279,NM_001127392	chr11,chr11,chr11	-,+,+	DKFZP434K028,C11orf9,C11orf9	-1042,-3368,-6108
chr7:99069408-99069847	chr7	+	99069506	99069591	True	NM_213603,NM_001198879,NM_001003714,NM_001039178,NM_001003713,NM_001013258,NM_004889	chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,-,-,-,-,+,-	ZNF789,ATP5J2-PTCD1,ATP5J2,ATP5J2,ATP5J2,ZNF789,ATP5J2	923,-5682,-5682,-5682,-5682,923,-5682
chr10:99473350-99473754	chr10	+	99473696	99473802	True	NR_026754,NM_031484	chr10,chr10	-,+	LOC100270710,MARVELD1	4150,-282
chr8:142352168-142352622	chr8	+	142352177	142352541	True	NR_024441,NM_005293	chr8,chr8	+,-	LOC731779,GPR20	-1580,24874
chr18:47807273-47807747	chr18	+	47807341	47807783	True	NM_001101654,NM_001204136,NM_001204139,NM_015844,NM_015847,NM_015846,NM_001204140,NM_001204141,NM_001204142,NM_001204143,NM_001204151,NM_001039535,NM_015845,NM_002384,NM_014593,NM_001204137,NM_001204138	chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18	-,-,-,-,-,-,-,-,-,-,-,+,-,-,-,-,-	CXXC1,MBD1,MBD1,MBD1,MBD1,MBD1,MBD1,MBD1,MBD1,MBD1,MBD1,SKA1,MBD1,MBD1,CXXC1,MBD1,MBD1	6959,411,411,411,411,411,411,411,411,404,-954,93608,411,411,6959,411,411
chr14:70232565-70232886	chr14	+	70232578	70232886	True	NM_001039465,NR_029378,NM_006925	chr14,chr14,chr14	+,-,+	SRSF5,LOC100289511,SRSF5	942,1596,947
chrX:14041340-14041789	chrX	+	14041339	14041502	True	NM_001042480,NM_003611,NM_001042479,NM_017856	chrX,chrX,chrX,chrX	-,+,-,-	GEMIN8,OFD1,GEMIN8,GEMIN8	6588,-288564,6588,6588
chr22:23854026-23854230	chr22	+	23854196	23854262	True	NM_153615,NM_020070	chr22,chr22	+,-	RGL4,IGLL1	178785,68283
chr19:2820483-2820753	chr19	+	2820620	2820686	True	NM_003021,NM_001102651	chr19,chr19	-,+	SGTA,ZNF554	-37266,-799
chr19:7698381-7698854	chr19	+	7698493	7698723	True	NM_006949,NR_033242,NM_020196,NM_174895,NM_001127396,NM_001171155	chr19,chr19,chr19,chr19,chr19,chr19	+,+,-,-,+,+	STXBP2,LOC100131801,XAB2,PCP2,STXBP2,LOC100131801	3267,-3873,-4054,65,3267,-3873
chr3:49313256-49313570	chr3	+	49313260	49313542	True	NM_198562,NR_036233	chr3,chr3	-,+	C3orf62,MIR4271	1024,-1758
chr1:147404327-147404866	chr1	+	147404426	147404909	True	NR_003377,NM_016334	chr1,chr1	-,+	PDZK1P1,GPR89B	79472,-3975
chr1:147404327-147404866	chr1	-	145822659	145823030	False	NM_001097612,NM_001097613,NM_001097616,NR_036541	chr1,chr1,chr1,chr1	-,-,+,-	GPR89A,GPR89A,GPR89C,GPR89A	4123,4123,60837,4123
chr10:33216644-33218237	chr10	+	33216770	33218103	True	NM_024688,NM_033668	chr10,chr10	+,-	C10orf68,ITGB1	-360178,6440
chr17:1961134-1961365	chr17	+	1961197	1961263	True	NM_006497,NM_001098202,NR_029674,NR_029625	chr17,chr17,chr17,chr17	+,+,-,-	HIC1,HIC1,MIR132,MIR212	-2855,-1644,-7895,-7523
chr6:2970236-2970715	chr6	+	2970317	2970753	True	NR_026855,NM_001195291,NM_004568	chr6,chr6,chr6	+,-,-	DKFZP686I15217,SERPINB6,SERPINB6	17447,1696,1696
chr19:41284200-41284788	chr19	+	41284248	41284798	True	NR_037791,NM_198476,NM_016154,NR_037775,NM_001202553,NM_006533	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+	RAB4B-EGLN2,C19orf54,RAB4B,MIA-RAB4B,MIA,MIA	-175,-28420,-175,-2857,-3217,-3017
chr1:27279397-27280165	chr1	+	27279549	27280037	True	NM_006600,NM_152365	chr1,chr1	+,-	NUDC,C1orf172	-31387,6920
chr11:68818252-68818696	chr11	+	68818274	68818618	True	NM_139075,NM_145015	chr11,chr11	+,-	TPCN2,MRGPRF	-1975,-37424
chr11:68227286-68227691	chr11	+	68227446	68227684	True	NM_018312,NM_001164164,NM_001164161,NM_001164160,NM_001164163,NM_001164162,NM_022338	chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,+,-	PPP6R3,PPP6R3,PPP6R3,PPP6R3,PPP6R3,PPP6R3,C11orf24	501,501,501,501,501,501,-187977
chr11:62371594-62372430	chr11	+	62371603	62372307	True	NM_004739,NM_153265,NM_000327	chr11,chr11,chr11	-,-,+	MTA2,EML3,ROM1	-2300,7980,7905
chr2:234625853-234626836	chr2	+	234625904	234626772	True	NM_001001394,NM_019078,NM_007120	chr2,chr2,chr2	-,+,+	DNAJB3,UGT1A5,UGT1A4	25939,-4317,665
chr16:11880049-11881408	chr16	+	11880088	11880919	True	NM_003498,NM_014153	chr16,chr16	+,-	SNN,ZC3H7A	-117851,10245
chr14:24565606-24566886	chr14	+	24565757	24566445	True	NM_001018073,NM_006177,NM_004563	chr14,chr14,chr14	+,-,+	PCK2,NRL,PCK2	-2333,-11925,-2333
chr17:41474530-41475265	chr17	+	41474768	41475106	True	NR_027412,NM_001661,NR_027413	chr17,chr17,chr17	-,+,-	LOC100130581,ARL4D,LOC100130581	-8502,1246,-8502
chr13:27828951-27829257	chr13	+	27828997	27829298	True	NR_002574,NR_002575,NM_182488,NR_026911,NM_000982	chr13,chr13,chr13,chr13,chr13	+,+,-,+,+	SNORD102,SNORA27,USP12,RPL21P28,RPL21	-19,239,-82964,-3357,-3358
chr18:59854259-59854527	chr18	+	59854266	59854436	True	NM_176787,NM_012327,NM_020854	chr18,chr18,chr18	-,-,+	PIGN,PIGN,KIAA1468	9,9,87
chr19:3605245-3606223	chr19	+	3605254	3606166	True	NM_001060,NM_133261,NM_201636	chr19,chr19,chr19	-,+,-	TBXA2R,GIPC3,TBXA2R	715,-19736,715
chr7:79082563-79082947	chr7	+	79082564	79082890	True	NR_031667,NM_012301	chr7,chr7	+,-	MIR548M,MAGI2	317681,50
chr19:45679576-45680146	chr19	+	45679900	45680010	True	NM_212550,NM_024108	chr19,chr19	+,-	BLOC1S3,TRAPPC6A	1992,1525
chr16:82080115-82080844	chr16	+	82080294	82080824	True	NM_145168,NM_002153	chr16,chr16	-,+	SDR42E1,HSD17B2	-35201,-11497
chr7:5553639-5554000	chr7	+	5553681	5554013	True	NM_024963,NM_003088	chr7,chr7	-,+	FBXL18,FSCN1	-282,78440
chr7:49811763-49812006	chr7	+	49811882	49811948	True	NM_001159878,NM_198570	chr7,chr7	-,+	ZPBP,VWC2	320962,1308
chr17:68085207-68086758	chr17	+	68085206	68086802	True	NM_170741,NM_170742,NR_036534	chr17,chr17,chr17	+,+,-	KCNJ16,KCNJ16,FLJ36644	-13831,14192,78799
chr17:30775190-30775544	chr17	+	30775235	30775375	True	NM_002815,NM_022344	chr17,chr17	+,-	PSMD11,C17orf75	-3797,-106046
chr10:50396306-50396747	chr10	+	50396571	50396733	True	NM_001010863,NM_001135196	chr10,chr10	-,+	C10orf128,C10orf71	-164,110453
chr5:122114053-122115897	chr5	+	122114105	122115940	True	NM_000943,NM_003100	chr5,chr5	-,+	PPIC,SNX2	256541,-3413
chr19:36523550-36523813	chr19	+	36523549	36523862	True	NM_001083961,NM_001199570,NM_015526	chr19,chr19,chr19	+,-,-	WDR62,CLIP3,CLIP3	21920,24,-11
chr2:115196627-115197116	chr2	+	115196672	115197163	True	NR_034130,NM_020868	chr2,chr2	-,+	LOC100499194,DPP10	-459111,2735
chr1:17767328-17768260	chr1	+	17767356	17768188	True	NM_001136204,NM_018715,NM_207421	chr1,chr1,chr1	-,-,+	RCC2,RCC2,PADI6	-2299,-1136,-68666
chr7:99871671-99872558	chr7	+	99872252	99872474	True	NR_028040,NM_001004351,NR_028039,NR_028038,NM_178831	chr7,chr7,chr7,chr7,chr7	-,+,-,-,-	GATS,SPDYE3,GATS,GATS,GATS	-2397,32850,-2397,-2397,-2397
chr7:131438568-131438825	chr7	+	131438595	131438873	True	NM_005397,NM_013255	chr7,chr7	-,+	PODXL,MKLN1	-197219,-426051
chr12:51866495-51866790	chr12	+	51866495	51866836	True	NM_001039960,NM_007210	chr12,chr12	+,-	SLC4A8,GALNT6	-47956,-81295
chr10:4958812-4959733	chr10	+	4958925	4959764	True	NR_026743,NM_001353	chr10,chr10	-,+	tAKR,AKR1C1	-460,45689
chr14:103390407-103390704	chr14	+	103390412	103390678	True	NM_006035,NM_030943	chr14,chr14	-,+	CDC42BPB,AMN	133114,-1470
chr4:156837410-156839348	chr4	+	156837594	156839388	True	NM_005651,NM_001334	chr4,chr4	+,-	TDO2,CTSO	-12805,35710
chr2:166481478-166481766	chr2	+	166481552	166481814	True	NM_004482,NM_024969	chr2,chr2	-,+	GALNT3,CSRNP3	169041,-52769
chr4:57624155-57625193	chr4	+	57624217	57624809	True	NM_021114,NM_005612	chr4,chr4	-,+	SPINK2,REST	63134,149232
chr9:118917962-118918195	chr9	+	118917987	118918240	True	NM_002581,NR_024032	chr9,chr9	+,-	PAPPA,C9orf27	-1968,-230610
chr19:55047916-55049749	chr19	+	55048022	55049430	True	NR_026716,NM_145057	chr19,chr19	+,-	KIR3DX1,CDC42EP5	-4165,-63600
chr6:74170800-74171112	chr6	+	74170821	74171018	True	NM_001123226,NM_012123,NM_133645,NM_138441	chr6,chr6,chr6,chr6	+,+,+,-	MTO1,MTO1,MTO1,MB21D1	435,435,435,-8778
chr16:2020159-2020702	chr16	+	2020280	2020376	True	NR_003142,NM_174903,NM_002952,NR_002327,NR_002326,NM_006453,NR_003020	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,-,-,-,+,+	SNHG9,RNF151,RPS2,SNORA10,SNORA64,TBL3,SNORA78	-5337,-3459,-5453,-7813,-7173,1687,-5149
chr1:47653475-47655238	chr1	+	47653541	47655199	True	NM_005764,NM_001010969	chr1,chr1	-,+	PDZK1IP1,CYP4A22	622,-50485
chr7:100806883-100807098	chr7	+	100806894	100807076	True	NM_003378,NM_001283	chr7,chr7	-,+	VGF,AP1S1	1826,-9259
chr16:66403114-66403606	chr16	+	66403120	66403642	True	NM_001795,NM_001172643	chr16,chr16	+,-	CDH5,TK2	-2646,180602
chr1:9085749-9086476	chr1	+	9085999	9086489	True	NM_001215,NM_207420	chr1,chr1	+,-	CA6,SLC2A7	-80128,15
chr14:55477253-55478164	chr14	+	55477306	55477940	True	NM_001008396,NM_080867	chr14,chr14	-,+	WDHD1,SOCS4	15939,15903
chr17:40706012-40706236	chr17	+	40706053	40706271	True	NM_000413,NM_025233,NM_001042531,NM_001042530,NM_001042532,NM_013290,NM_001042529	chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,-,+	HSD17B1,COASY,COASY,COASY,COASY,PSMC3IP,COASY	-2120,7820,7820,7820,7820,23526,7820
chr10:11085212-11085593	chr10	+	11085243	11085547	True	NR_024411,NM_006561	chr10,chr10	-,+	LOC254312,CELF2	-91117,-25401
chr5:90678397-90678712	chr5	+	90678448	90678754	True	NM_020801,NR_027435	chr5,chr5	-,+	ARRDC3,LOC100129716	445,-2335
chr16:53078276-53079043	chr16	+	53078412	53078796	True	NR_033920,NM_025134	chr16,chr16	-,+	LOC643714,CHD9	-437525,10148
chr13:43601398-43602086	chr13	+	43601587	43601799	True	NM_013238,NM_033255	chr13,chr13	+,-	DNAJC15,EPSTI1	-4285,-35210
chr1:32085758-32086166	chr1	+	32085776	32086174	True	NM_001525,NR_033688	chr1,chr1	+,-	HCRTR1,PEF1	-2526,24094
chr19:36005245-36006920	chr19	+	36005460	36006968	True	NM_001126059,NM_001190348,NM_001126058,NM_001126057,NM_001126056,NM_001190349,NM_001190347,NR_033746,NM_014364,NM_033317	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,-,+,-	DMKN,DMKN,DMKN,DMKN,DMKN,DMKN,DMKN,DMKN,GAPDHS,DMKN	-4069,-900,-900,-900,-900,-900,-900,-4048,17345,-900
chr14:45407042-45407665	chr14	+	45407041	45407573	True	NM_017658,NM_015091	chr14,chr14	-,+	KLHL28,FAM179B	23656,23842
chr12:5475152-5476193	chr12	+	5475274	5476052	True	NM_020373,NM_001102654	chr12,chr12	-,+	ANO2,NTF3	579406,65227
chr3:184538233-184539222	chr3	+	184538318	184539099	True	NM_001009921,NM_022149,NM_015303	chr3,chr3,chr3	+,-,+	VPS8,MAGEF1,VPS8	-8438,-108482,-8438
chr14:23512777-23513122	chr14	+	23512795	23513003	True	NM_001099780,NM_001144932,NM_002797,NM_001130725	chr14,chr14,chr14,chr14	+,-,-,-	PSMB11,PSMB5,PSMB5,PSMB5	-1470,-8441,-8441,-8366
chr5:94982603-94982856	chr5	+	94982642	94982842	True	NM_031952,NM_001131066,NM_173362,NM_001131065	chr5,chr5,chr5,chr5	-,+,+,+	SPATA9,RFESD,RFESD,RFESD	35929,-212,-110,-110
chr1:169355771-169356395	chr1	+	169355957	169356350	True	NM_003666,NM_197972	chr1,chr1	+,-	BLZF1,NME7	-18819,-18771
chr15:65066701-65066932	chr15	+	65066789	65066873	True	NM_194272,NM_001195059	chr15,chr15	-,+	RBPMS2,PLEKHO2	947,67208
chr4:113733153-113734316	chr4	+	113733310	113733972	True	NR_029857,NM_001127493	chr4,chr4	-,+	MIR302B,ANK2	-163597,5266
chr10:7709647-7709873	chr10	+	7709786	7709868	True	NM_002216,NM_001001851,NM_030569	chr10,chr10,chr10	+,-,-	ITIH2,ITIH5,ITIH5	35367,-825,-825
chr2:96810267-96810657	chr2	+	96810267	96810627	True	NM_004418,NM_001037228,NM_001002036	chr2,chr2,chr2	-,+,-	DUSP2,LOC285033,ASTL	602,95349,-6092
chr15:84323697-84323961	chr15	+	84323735	84324008	True	NM_207517,NM_001717	chr15,chr15	+,-	ADAMTSL3,BNC1	-948,-370267
chr3:50188866-50189177	chr3	+	50188870	50189136	True	NM_004186,NM_006764	chr3,chr3	+,-	SEMA3F,IFRD2	3711,140940
chr12:6381367-6382395	chr12	+	6381458	6382107	True	NM_018173,NM_001065	chr12,chr12	+,-	PLEKHG6,TNFRSF1A	37494,69226
chr12:120740343-120740613	chr12	+	120740342	120740456	True	NM_000928,NM_012240	chr12,chr12	-,+	PLA2G1B,SIRT4	25190,-269
chr19:42364103-42364306	chr19	+	42364226	42364316	True	NM_001022,NM_173506	chr19,chr19	+,-	RPS19,LYPD4	-289,-15718
chr2:107137713-107138176	chr2	+	107137810	107138212	True	NM_001144013,NR_003506	chr2,chr2	-,+	RGPD3,PLGLA	-53009,-135092
chr2:131116494-131116878	chr2	+	131116504	131116892	True	NM_032357,NM_001142370,NM_014369	chr2,chr2,chr2	-,+,+	CCDC115,PTPN18,PTPN18	-16582,-2975,-2975
chr20:38777485-38778445	chr20	+	38777704	38778487	True	NM_003286,NM_005461	chr20,chr20	+,-	TOP1,MAFB	878974,539439
chr1:229438451-229438837	chr1	+	229438581	229438825	True	NM_145257,NM_006542	chr1,chr1	-,+	C1orf96,SPHAR	39913,1303
chr5:149680589-149681602	chr5	+	149680715	149681527	True	NM_001008657,NM_001012301	chr5,chr5	+,-	TCOF1,ARSI	55674,1048
chr16:56488999-56490898	chr16	+	56489413	56490855	True	NM_018233,NM_007006	chr16,chr16	+,-	OGFOD1,NUDT21	-4047,-4152
chr16:10841547-10841966	chr16	+	10841559	10841795	True	NM_002484,NM_144674	chr16,chr16	+,-	NUBP1,TEKT5	-3920,-52757
chr2:47139106-47139400	chr2	+	47139135	47139203	True	NM_139279,NM_001171509,NM_020458,NM_001171507,NM_001171510,NM_001171506	chr2,chr2,chr2,chr2,chr2,chr2	-,-,+,-,-,-	MCFD2,MCFD2,TTC7A,MCFD2,MCFD2,MCFD2	3854,3854,29109,4098,4098,3854
chr10:135206758-135207094	chr10	+	135206757	135206969	True	NM_138384,NM_004092	chr10,chr10	+,-	MTG1,ECHS1	651,-19849
chr9:66364120-66365094	chr9	+	66364123	66364623	True	NR_024443,NR_024496	chr9,chr9	-,+	LOC100133920,LOC442421	666409,129645
chr9:66364120-66365094	chr9	+	44016686	44017186	False	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	-385956,-331852
chr19:4184529-4184746	chr19	+	4184535	4184671	True	NM_016539,NM_133475,NM_001193285	chr19,chr19,chr19	-,+,-	SIRT6,ANKRD24,SIRT6	-1939,-1235,-1939
chr3:134205433-134206872	chr3	+	134205587	134206840	True	NM_025180,NM_001042400,NM_001042384,NM_015391,NM_001042383,NR_024400,NR_024401	chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,-,+,-,-	CEP63,CEP63,CEP63,ANAPC13,CEP63,ANAPC13,ANAPC13	-595,-745,-1067,-724,-1067,-722,-756
chr16:53088178-53088632	chr16	+	53088422	53088664	True	NR_033920,NM_025134	chr16,chr16	-,+	LOC643714,CHD9	-447535,280
chr1:114479177-114480280	chr1	+	114479705	114480312	True	NM_152696,NM_198268,NM_006594	chr1,chr1,chr1	+,+,-	HIPK1,HIPK1,AP4B1	-7768,-7768,-31964
chr7:28996194-28996479	chr7	+	28996200	28996480	True	NM_014817,NM_004067	chr7,chr7	-,+	TRIL,CHN2	1599,237640
chr18:9101487-9102452	chr18	+	9101642	9102388	True	NM_001042388,NM_021074	chr18,chr18	-,+	PPP4R1,NDUFV2	512262,239
chr19:46408091-46408401	chr19	+	46408327	46408415	True	NM_004497,NM_001012643,NM_001029861	chr19,chr19,chr19	+,-,-	FOXA3,MYPOP,NANOS2	-40860,-2465,9671
chr3:48488471-48489206	chr3	+	48488561	48489169	True	NM_130384,NM_024661,NM_015933,NM_032166	chr3,chr3,chr3,chr3	+,-,+,+	ATRIP,CCDC51,CCDC72,ATRIP	-394,-7032,-6926,-394
chr16:27213652-27214748	chr16	+	27213700	27214702	True	NM_024773,NM_145080,NM_001145348	chr16,chr16,chr16	+,-,+	JMJD5,NSMCE1,JMJD5	104,65461,593
chr8:37826253-37827247	chr8	+	37826287	37827201	True	NM_000025,NM_004095	chr8,chr8	-,+	ADRB3,EIF4EBP1	-2103,60818
chrX:23687201-23687888	chrX	+	23687379	23687634	True	NM_006406,NM_001033583	chrX,chrX	+,-	PRDX4,ACOT9	-1787,73828
chr19:50709721-50710190	chr19	+	50709795	50710107	True	NM_024729,NM_001145809,NM_001077186,NM_152358	chr19,chr19,chr19,chr19	+,+,+,-	MYH14,MYH14,MYH14,IZUMO2	-2961,-2961,-2961,-43257
chr10:5707949-5708388	chr10	+	5707990	5708324	True	NM_024701,NR_024581,NM_017782,NR_037164	chr10,chr10,chr10,chr10	-,-,+,-	ASB13,ASB13,C10orf18,ASB13	284,284,18476,284
chr3:49506772-49507147	chr3	+	49506922	49507196	True	NM_001177639,NM_001177638,NM_001177635,NM_001177634,NM_001177637,NM_001177636,NM_004393,NM_001165928,NM_032316,NM_001177644,NM_001177640,NM_001177641,NM_001177642,NM_001177643	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,+,+,+,+,-,+,+,+,+,+	DAG1,DAG1,DAG1,DAG1,DAG1,DAG1,DAG1,DAG1,NICN1,DAG1,DAG1,DAG1,DAG1,DAG1	368,368,368,368,368,368,368,368,-40165,368,368,368,368,-827
chr11:44070892-44072684	chr11	+	44071119	44072279	True	NM_001031854,NM_021926	chr11,chr11	+,-	ACCSL,ALX4	-1642,259487
chr7:75114665-75114999	chr7	+	75114805	75115023	True	NM_001099415,NM_001099435	chr7,chr7	-,+	POM121C,SPDYE5	595,9275
chr7:75114665-75114999	chr7	-	72350735	72350791	False	NR_003666,NM_172020	chr7,chr7	-,+	SPDYE7P,POM121	-11080,-850
chr3:39230162-39232127	chr3	+	39230640	39231914	True	NM_145755,NM_001198621,NM_194293	chr3,chr3,chr3	+,-,-	TTC21A,XIRP1,XIRP1	-81539,2221,2213
chr13:19772428-19772761	chr13	+	19772543	19772615	True	NM_006001,NR_034026	chr13,chr13	-,+	TUBA3C,LOC100287114	-16551,146573
chr7:74350985-74352746	chr7	+	74351013	74352296	True	NM_001025202,NM_001145063	chr7,chr7	-,+	STAG3L2,GATSL1	-44282,26786
chr7:74350985-74352746	chr7	+	72541551	72542718	False	NR_003664,NR_003580	chr7,chr7	-,+	SPDYE8P,LOC100093631	-41242,26293
chr7:74350985-74352746	chr7	-	74679906	74681074	False	NM_001003795,NR_003580	chr7,chr7	+,-	GTF2IRD2B,LOC100093631	-171617,-26447
chr7:74350985-74352746	chr7	-	74894163	74895330	False	NM_001145064,NR_003664	chr7,chr7	-,+	GATSL2,SPDYE8P	-26822,41202
chr15:65806035-65807141	chr15	+	65806433	65807187	True	NM_130434,NM_197960,NM_197961,NM_017743,NM_016395	chr15,chr15,chr15,chr15,chr15	-,-,-,-,+	DPP8,DPP8,DPP8,DPP8,PTPLAD1	2898,2472,2898,2898,15639
chr9:134378775-134379072	chr9	+	134378813	134379029	True	NM_001136114,NM_001136113,NM_001135954,NM_007171,NM_001077365,NM_001077366	chr9,chr9,chr9,chr9,chr9,chr9	+,+,-,+,+,+	POMT1,POMT1,UCK1,POMT1,POMT1,POMT1	-575,-575,27683,-575,-575,-575
chr7:102281755-102282277	chr7	+	102281772	102282238	True	NM_001114403,NM_001166339,NM_001031618	chr7,chr7,chr7	-,+,+	UPK3BL,SPDYE2L,SPDYE2	1050,8533,8533
chr7:102281755-102282277	chr7	+	102182661	102182969	False	NM_001031618,NM_001166339,NM_001097615	chr7,chr7,chr7	+,+,-	SPDYE2,SPDYE2L,POLR2J3	8709,8709,30149
chr16:48420451-48420842	chr16	+	48420570	48420858	True	NM_003031,NM_031490	chr16,chr16	-,+	SIAH1,LONP2	-1341,-142410
chr2:121223889-121224942	chr2	+	121224303	121224769	True	NM_002193,NR_027181	chr2,chr2	+,-	INHBB,LOC84931	-120635,-378
chr7:99767132-99767942	chr7	+	99767257	99767928	True	NM_024637,NM_152742,NM_012447	chr7,chr7,chr7	-,-,+	GAL3ST4,GPC2,STAG3	-884,7112,7609
chr18:60985863-60986635	chr18	+	60985974	60986661	True	NM_002639,NM_000657,NM_000633	chr18,chr18,chr18	+,-,-	SERPINB5,BCL2,BCL2	157482,2,2
chr9:38440395-38440712	chr9	+	38440400	38440752	True	NM_001007563,NM_000692	chr9,chr9	-,+	IGFBPL1,ALDH1B1	-15956,-47749
chr19:9201911-9202494	chr19	+	9202067	9202507	True	NM_001005193,NM_001004456	chr19,chr19	-,+	OR7G2,OR1M1	11525,1413
chr9:14994526-14996249	chr9	+	14994690	14996248	True	NR_003920,NM_144966	chr9,chr9	+,-	LOC389705,FREM1	-1416,-83697
chr2:232258759-232259524	chr2	+	232258938	232259545	True	NR_002921,NM_145236	chr2,chr2	-,+	SNORA75,B3GNT7	61152,789
chr19:44665620-44666990	chr19	+	44665748	44666905	True	NR_033341,NM_001032372,NM_001032373,NM_001032374,NM_015919,NM_001146220	chr19,chr19,chr19,chr19,chr19,chr19	-,+,+,+,+,+	LOC100379224,ZNF226,ZNF226,ZNF226,ZNF226,ZNF226	-48412,2411,2343,2343,2343,2309
chr19:47851766-47852299	chr19	+	47851810	47851939	True	NM_001009813,NM_014681	chr19,chr19	-,+	MEIS3,DHX34	70903,598
chr12:49742023-49742623	chr12	+	49742117	49742653	True	NM_001008223,NM_024902	chr12,chr12	-,+	C1QL4,DNAJC22	-11146,-1127
chr1:150573612-150574428	chr1	+	150573883	150574473	True	NM_182763,NR_036211	chr1,chr1	-,+	MCL1,MIR4257	-21669,-49538
chr9:21993694-21994019	chr9	+	21993861	21994009	True	NM_058195,NR_003529	chr9,chr9	-,+	CDKN2A,CDKN2B-AS1	531,780
chr13:47372061-47373924	chr13	+	47372148	47373965	True	NM_001164213,NM_001984	chr13,chr13	+,-	LRCH1,ESD	-244904,-781
chr2:74173200-74173889	chr2	+	74173219	74173929	True	NM_080918,NM_003584	chr2,chr2	+,-	DGUOK,DUSP11	-19317,-165935
chr12:93476264-93477646	chr12	+	93476377	93477132	True	NM_019094,NM_003566	chr12,chr12	+,-	NUDT4,EEA1	294568,-153270
chr7:99064267-99064617	chr7	+	99064543	99064669	True	NM_213603,NM_001198879,NM_001003714,NM_001039178,NM_001003713,NM_001013258,NM_004889	chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,-,-,-,-,+,-	ZNF789,ATP5J2-PTCD1,ATP5J2,ATP5J2,ATP5J2,ZNF789,ATP5J2	5845,-719,-719,-719,-719,5845,-719
chr1:85534661-85535798	chr1	+	85534665	85535593	True	NM_145172,NM_018298	chr1,chr1	+,-	WDR63,MCOLN3	-6723,-20496
chr2:219723059-219723451	chr2	+	219723215	219723431	True	NM_017431,NM_006522	chr2,chr2	-,+	PRKAG3,WNT6	-26703,1114
chr11:60553003-60554386	chr11	+	60553018	60554302	True	NM_206893,NM_004778	chr11,chr11	+,-	MS4A10,GPR44	-248,69192
chr3:158361640-158362307	chr3	+	158361640	158362356	True	NM_024996,NM_020169	chr3,chr3	+,-	GFM1,LXN	-40,28176
chr3:12301287-12302935	chr3	+	12301385	12302881	True	NM_003256,NM_005037	chr3,chr3	-,+	TIMP4,PPARG	-100534,26467
chr2:70485792-70486503	chr2	+	70485934	70486528	True	NM_016297,NM_022173	chr2,chr2	+,-	PCYOX1,TIA1	-754,-10155
chr3:160286543-160288543	chr3	+	160286713	160288575	True	NM_002268,NM_025047	chr3,chr3	-,+	KPNA4,ARL14	-3337,106372
chr19:12037496-12038023	chr19	+	12037608	12037755	True	NM_144566,NM_001080411	chr19,chr19	+,-	ZNF700,ZNF433	-1765,108825
chrX:47487597-47489027	chrX	+	47487761	47489059	True	NM_001145252,NM_133499,NM_006950,NM_002621,NR_028119	chrX,chrX,chrX,chrX,chrX	-,-,-,-,+	CFP,SYN1,SYN1,CFP,LOC100133957	360,-8505,-8505,695,29172
chr3:130292706-130292969	chr3	+	130292810	130293002	True	NM_001102608,NM_014602	chr3,chr3	+,-	COL6A6,PIK3R4	-13694,172744
chrX:99196619-99198088	chrX	+	99196757	99197524	True	NM_022144,NR_024608	chrX,chrX	+,-	TNMD,LOC442459	642265,-1916
chr1:153940049-153941112	chr1	+	153940196	153940990	True	NM_014437,NM_130898,NM_006694,NM_181715	chr1,chr1,chr1,chr1	-,+,-,-	SLC39A1,CREB3L4,JTB,CRTC2	-8,5,9511,-9064
chr19:45179775-45179986	chr19	+	45179815	45179927	True	NM_001127893,NM_020219,NR_027754	chr19,chr19,chr19	+,+,-	CEACAM19,CEACAM19,CEACAM22P	-5151,-5151,-119665
chr2:58689116-58689551	chr2	+	58689115	58689526	True	NR_033873,NM_018062	chr2,chr2	+,-	FLJ30838,FANCL	58361,-220600
chr8:122652471-122652781	chr8	+	122652568	122652830	True	NR_002835,NM_005328	chr8,chr8	+,-	HAS2-AS1,HAS2	-1034,850
chrY:22736640-22737043	chrY	+	22736639	22737005	True	NM_004681,NR_001542	chrY,chrY	+,-	EIF1AY,TTTY10	605,-55525
chr2:224701379-224701718	chr2	+	224701447	224701759	True	NM_022915,NM_001039569	chr2,chr2	+,-	MRPL44,AP1S3	120361,610
chr17:37826542-37826790	chr17	+	37826553	37826741	True	NM_002686,NM_003673,NM_033419	chr17,chr17,chr17	+,+,-	PNMT,TCAP,PGAP3	-2097,-5005,17619
chr1:2343400-2343705	chr1	+	2343457	2343751	True	NM_002617,NM_007033,NM_153818	chr1,chr1,chr1	-,+,-	PEX10,RER1,PEX10	309,-20294,309
chr19:58446585-58447247	chr19	+	58446731	58447279	True	NM_133460,NR_036508	chr19,chr19	-,+	ZNF418,LOC100128398	-7,66982
chr2:42276997-42277282	chr2	+	42277032	42277238	True	NM_138370,NM_004718	chr2,chr2	+,-	PKDCC,COX7A2L	-1922,311168
chr22:32592502-32593286	chr22	+	32592570	32593288	True	NM_001098527,NR_033411,NM_006605,NM_001159546,NM_001159545	chr22,chr22,chr22,chr22,chr22	-,+,-,-,-	RFPL2,SLC5A1,RFPL2,RFPL2,RFPL2	6226,-137464,-3104,5299,7480
chrX:25034550-25035291	chrX	+	25034589	25035151	True	NM_139058,NR_003007	chrX,chrX	-,+	ARX,SCARNA23	-524,-272082
chr7:150148425-150148709	chr7	+	150148577	150148637	True	NM_175571,NM_002889	chr7,chr7	+,-	GIMAP8,RARRES2	-666,-109814
chr1:93551134-93551780	chr1	+	93551348	93551781	True	NM_001167830,NM_001164392,NM_001164393,NM_007358,NM_001164391	chr1,chr1,chr1,chr1,chr1	-,+,+,+,+	TMED5,MTF2,MTF2,MTF2,MTF2	94522,-6610,-6610,-6610,-6610
chr6:43210037-43210319	chr6	+	43210124	43210194	True	NM_032538,NM_199184	chr6,chr6	+,-	TTBK1,C6orf108	1027,-12913
chr1:164852949-164853884	chr1	+	164853126	164853911	True	NM_001174069,NM_002585	chr1,chr1	-,+	LMX1A,PBX1	471618,-324580
chr4:169425667-169426093	chr4	+	169425762	169426126	True	NM_001012967,NM_001166108,NM_016081	chr4,chr4,chr4	-,+,+	DDX60L,PALLD,PALLD	-24124,-7603,-7603
chr22:42950222-42950563	chr22	+	42950297	42950612	True	NR_002184,NM_014509	chr22,chr22	-,+	RRP7B,SERHL2	27456,-423
chr22:42950222-42950563	chr22	+	42897246	42897299	False	NR_027786,NM_015703	chr22,chr22	+,-	SERHL,RRP7A	-715,18583
chr17:40307612-40307901	chr17	+	40307639	40307871	True	NM_004583,NM_201434,NM_033194	chr17,chr17,chr17	-,-,+	RAB5C,RAB5C,HSPB9	-617,-617,-32934
chr18:9333941-9334231	chr18	+	9334015	9334087	True	NM_020648,NM_001042388	chr18,chr18	+,-	TWSG1,PPP4R1	677,280565
chr16:21513569-21513808	chr16	+	21513709	21513841	True	NM_001077180,NR_027155	chr16,chr16	+,-	METTL9,LOC100271836	97014,-107
chr16:21513569-21513808	chr16	+	18937917	18937987	False	NM_015092,NM_024847	chr16,chr16	-,+	SMG1,TMC7	-191,57268
chr10:5049057-5049957	chr10	+	5049388	5049908	True	NM_001135241,NM_001353	chr10,chr10	-,+	AKR1C2,AKR1C1	-3335,-43991
chr10:5049057-5049957	chr10	-	5000968	5001489	False	NR_026743,NM_001353	chr10,chr10	-,+	tAKR,AKR1C1	-42503,3964
chr10:90218132-90218530	chr10	+	90218172	90218558	True	NM_018363,NM_001010939	chr10,chr10	-,+	RNLS,LIPJ	124574,127960
chr17:1665121-1666052	chr17	+	1665182	1666092	True	NM_002615,NR_028505	chr17,chr17	+,-	SERPINF1,C17orf91	26,-45616
chr8:99831207-99831625	chr8	+	99831459	99831667	True	NM_006281,NM_001142462	chr8,chr8	-,+	STK3,OSR2	6298,124963
chr15:101089000-101090684	chr15	+	101089151	101090622	True	NM_024708,NM_178842	chr15,chr15	+,-	ASB7,LASS3	52132,-4226
chr20:22565185-22565443	chr20	+	22565345	22565435	True	NM_021784,NM_153675,NR_001558,NM_001052	chr20,chr20,chr20,chr20	-,-,-,+	FOXA2,FOXA2,NCRNA00261,SSTR4	-244,716,-6065,450621
chr22:38204852-38205187	chr22	+	38204993	38205227	True	NM_138797,NM_014291,NM_005318,NM_001171690	chr22,chr22,chr22,chr22	-,+,+,+	ANKRD54,GCAT,H1F0,GCAT	35176,-1132,-3930,-1132
chr11:64126100-64126329	chr11	+	64126290	64126358	True	NM_003942,NR_031602,NM_001006944,NM_016404	chr11,chr11,chr11,chr11	+,+,+,-	RPS6KA4,MIR1237,RPS6KA4,TRMT112	266,9715,266,-41257
chr14:100532778-100533884	chr14	+	100532819	100533818	True	NM_016337,NM_206918	chr14,chr14	+,-	EVL,DEGS2	-1120,92249
chr7:66366990-66367396	chr7	+	66367030	66367400	True	NR_003934,NM_017994	chr7,chr7	-,+	LOC729156,C7orf42	-57217,18802
chr20:42359247-42359652	chr20	+	42359262	42359558	True	NM_001008901,NM_176791,NM_002466	chr20,chr20,chr20	-,-,+	GTSF1L,GTSF1L,MYBL2	-3620,-3620,-63604
chrX:63422786-63423281	chrX	+	63422817	63423313	True	NM_152424,NM_001010888	chrX,chrX	-,+	FAM123B,ZC3H12B	2361,1285301
chr2:69611749-69612424	chr2	+	69611966	69612338	True	NM_002056,NR_036073	chr2,chr2	-,+	GFPT1,MIR3126	2100,-281212
chr10:47087496-47088170	chr10	+	47087525	47088099	True	NR_003277,NM_005972	chr10,chr10	-,+	LOC728643,PPYR1	45789,-4042
chr5:107720590-107721456	chr5	+	107720603	107721381	True	NM_005246,NM_001163315	chr5,chr5	+,-	FER,FBXL17	362141,-2804
chr6:159422821-159424444	chr6	+	159423077	159424144	True	NM_031924,NM_001195032	chr6,chr6	-,+	RSPH3,C6orf99	-1879,-113509
chr7:130019914-130020350	chr7	+	130019919	130020311	True	NM_001868,NM_018718	chr7,chr7	+,-	CPA1,TSGA14	-22,60593
chr6:155532274-155533765	chr6	+	155532331	155533745	True	NM_016020,NM_001010927	chr6,chr6	-,+	TFB1M,TIAM2	101928,4351
chr1:86918577-86920329	chr1	+	86919173	86919808	True	NM_001285,NM_020729	chr1,chr1	+,-	CLCA1,ODF2L	14717,-57148
chr9:113090940-113091510	chr9	+	113091108	113091533	True	NM_001136562,NM_001003936	chr9,chr9	+,-	AKAP2,TXNDC8	-203388,8654
chr12:513721-515175	chr12	+	513784	515046	True	NM_001130146,NM_001042603,NM_032358	chr12,chr12,chr12	+,-,+	CCDC77,KDM5A,CCDC77	-3096,-15164,-3096
chr12:110271564-110272287	chr12	+	110271597	110271763	True	NM_021625,NM_001143852	chr12,chr12	-,+	TRPV4,TCHP	-385,66315
chr16:724406-724664	chr16	+	724481	724689	True	NM_001005920,NM_138769,NM_003961,NM_005861	chr16,chr16,chr16,chr16	-,+,+,+	JMJD8,RHOT2,RHBDL1,STUB1	9800,-6399,1385,5425
chr2:206951769-206952631	chr2	+	206951801	206952284	True	NM_001037663,NM_017759	chr2,chr2	+,-	EEF1B2,INO80D	72033,-895
chr1:150121907-150122113	chr1	+	150122008	150122082	True	NM_016274,NM_001136479	chr1,chr1	+,-	PLEKHO1,ANP32E	87,84994
chrX:151286590-151287674	chrX	+	151286669	151287645	True	NM_001011550,NM_021049	chrX,chrX	+,-	MAGEA4,MAGEA5	-199960,-225
chr1:153347338-153347613	chr1	+	153347342	153347448	True	NM_005621,NM_002965	chr1,chr1	-,+	S100A12,S100A9	677,-17063
chr2:177132919-177134096	chr2	+	177133061	177133963	True	NR_033979,NM_006554,NR_027850	chr2,chr2,chr2	-,+,+	LOC401022,MTX2,MTX2	-79375,159,159
chr15:83778757-83779917	chr15	+	83778803	83779965	True	NM_001144903,NM_023003,NM_025238	chr15,chr15,chr15	+,+,-	TM6SF1,TM6SF1,BTBD1	-2530,-2530,-42697
chr1:14692261-14692868	chr1	+	14692324	14692905	True	NM_015209,NR_027136	chr1,chr1	+,-	KAZN,C1orf126	232307,786106
chr3:185302635-185303023	chr3	+	185302683	185302869	True	NM_021627,NM_139248	chr3,chr3	+,-	SENP2,LIPH	1161,-32314
chr8:144495049-144496122	chr8	+	144495278	144495858	True	NM_201589,NM_052924	chr8,chr8	-,+	MAFA,RHPN1	16794,-44304
chr5:132946275-132946581	chr5	+	132946418	132946627	True	NM_003202,NM_015082	chr5,chr5	+,-	TCF7,FSTL4	503774,1647
chr18:7117665-7117896	chr18	+	7117748	7117810	True	NM_005559,NM_001105581	chr18,chr18	-,+	LAMA1,LRRC30	53,113326
chr3:178763845-178764898	chr3	+	178763892	178764806	True	NM_022470,NM_006218	chr3,chr3	-,+	ZMAT3,PIK3CA	24900,101504
chr17:2615121-2615456	chr17	+	2615179	2615443	True	NM_015229,NM_001100398	chr17,chr17	-,+	KIAA0664,RAP1GAP2	-252,84288
chr6:143761734-143762952	chr6	+	143761737	143762971	True	NM_182503,NM_003630	chr6,chr6	-,+	ADAT2,PEX3	8928,8946
chr11:128380375-128380791	chr11	+	128380466	128380766	True	NM_001162422,NM_001167681	chr11,chr11	-,+	ETS1,FLI1	11489,183044
chr3:71801462-71802174	chr3	+	71801571	71802201	True	NM_173359,NM_018971,NM_001134649	chr3,chr3,chr3	-,+,-	EIF4E3,GPR27,EIF4E3	1773,999,1381
chr15:54030883-54031580	chr15	+	54031267	54031625	True	NM_182758,NM_001080534	chr15,chr15	-,+	WDR72,UNC13C	20284,273475
chr1:35662429-35662790	chr1	+	35662429	35662795	True	NM_005066,NM_005095	chr1,chr1	-,+	SFPQ,ZMYM4	-3686,71772
chr1:27960168-27960668	chr1	+	27960193	27960603	True	NM_001042747,NM_001042729,NM_005248,NM_001143912	chr1,chr1,chr1,chr1	-,-,-,+	FGR,FGR,FGR,FAM76A	-7442,-7087,1174,91886
chr6:7317882-7318781	chr6	+	7317883	7318581	True	NM_031480,NM_003144	chr6,chr6	+,-	RIOK1,SSR1	71480,-4342
chr5:177024431-177025271	chr5	+	177024785	177025075	True	NR_024019,NM_017510,NM_007255	chr5,chr5,chr5	-,+,+	FAM193B,TMED9,B4GALT7	-43237,-5628,2043
chr2:157290911-157292006	chr2	+	157291278	157291843	True	NM_006186,NM_001083112,NM_000408	chr2,chr2,chr2	-,+,+	NR4A2,GPD2,GPD2	-101991,121,1056
chr19:16772761-16774498	chr19	+	16772939	16774326	True	NM_024104,NM_024074	chr19,chr19	-,+	C19orf42,TMEM38A	-1971,-1059
chr11:47290279-47290880	chr11	+	47290356	47290920	True	NM_130472,NM_130473,NM_130470,NM_130471,NM_130476,NM_130474,NM_130475,NM_003682,NM_001131064,NM_001135943,NM_001135944	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,+,+,+,-,+,+	MADD,MADD,MADD,MADD,MADD,MADD,MADD,MADD,ACP2,MADD,MADD	278,278,6,278,750,278,750,278,-19899,750,278
chr7:98477485-98478915	chr7	+	98477524	98478886	True	NR_037403,NM_001134450,NM_001134451,NM_152913,NM_003496	chr7,chr7,chr7,chr7,chr7	+,-,-,-,+	MIR3609,TMEM130,TMEM130,TMEM130,TRRAP	386,-9851,-9851,-9851,-1463
chr2:190034527-190036298	chr2	+	190034773	190036334	True	NM_000393,NR_037401	chr2,chr2	-,+	COL5A2,MIR3606	8321,-174482
chr11:65479127-65479365	chr11	+	65479235	65479409	True	NM_182709,NM_006388,NM_182710,NM_032193	chr11,chr11,chr11,chr11	+,+,+,-	KAT5,KAT5,KAT5,RNASEH2C	79,79,79,9050
chr16:88520349-88520586	chr16	+	88520444	88520550	True	NM_000101,NM_153813	chr16,chr16	-,+	CYBA,ZFPM1	196957,-481
chr16:2014609-2014959	chr16	+	2014624	2014861	True	NR_003142,NM_174903,NM_005061,NM_002952,NR_002327,NR_002326,NM_006453,NR_003020,NM_004548	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,-,-,-,-,+,+,+	SNHG9,RNF151,RPL3L,RPS2,SNORA10,SNORA64,TBL3,SNORA78,NDUFB10	135,2013,-9945,17,-2157,-1517,7202,323,-5158
chr11:416291-416591	chr11	+	416377	416545	True	NM_001135053,NM_007183,NM_001135054,NM_021805	chr11,chr11,chr11,chr11	-,+,-,-	SIGIRR,PKP3,SIGIRR,SIGIRR	902,-22211,-1378,902
chr3:114865820-114866526	chr3	+	114866034	114866537	True	NM_001130064,NM_015642	chr3,chr3	+,-	GAP43,ZBTB20	475613,6
chr15:25448453-25449033	chr15	+	25448589	25449047	True	NR_003315,NR_003314,NR_003313,NR_003312,NR_003311,NR_003310,NR_022010,NR_003495,NR_003308,NR_003309,NM_130838,NR_003306,NR_003307	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,+,-,+,+	SNORD115-23,SNORD115-22,SNORD115-21,SNORD115-20,SNORD115-19,SNORD115-18,PAR4,SNORD115-24,SNORD115-16,SNORD115-17,UBE3A,SNORD115-14,SNORD115-15	7895,6017,2361,2361,-266,-266,7791,9758,-4045,-266,201656,-8572,2361
chr9:113337184-113337623	chr9	+	113337322	113337619	True	NM_001166280,NM_153366	chr9,chr9	+,-	MUSK,SVEP1	93431,4598
chr6:105851519-105851942	chr6	+	105851547	105851994	True	NR_037157,NM_002726	chr6,chr6	+,-	C6orf112,PREP	-266038,-548
chr8:135722052-135723505	chr8	+	135722078	135723323	True	NM_020863,NR_002438,NM_001174157	chr8,chr8,chr8	-,+,-	ZFAT,ZFAT-AS1,ZFAT	2020,-111815,2020
chr17:26987503-26988726	chr17	+	26987694	26988616	True	NM_006923,NM_003170	chr17,chr17	-,+	SDF2,SUPT6H	374,685
chr1:153536526-153536736	chr1	+	153536534	153536716	True	NM_006271,NM_005978	chr1,chr1	+,-	S100A1,S100A2	64156,1640
chr16:3027966-3029190	chr16	+	3028205	3028461	True	NM_152341,NM_004203,NM_182687	chr16,chr16,chr16	+,-,-	PAQR4,PKMYT1,PKMYT1	-8917,2129,2129
chr19:10826337-10827321	chr19	+	10826508	10827284	True	NM_001005361,NM_001005360,NM_001005362,NM_004945,NR_030368,NR_024333,NM_001190716	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,-,+	DNM2,DNM2,DNM2,DNM2,MIR638,LOC147727,DNM2	1444,1444,1444,1444,1795,-61960,1444
chr19:11198411-11199915	chr19	+	11198619	11199900	True	NM_001195802,NM_001195803,NM_001195800,NM_000527,NM_001195798,NM_001195799,NM_182513	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,+,-	LDLR,LDLR,LDLR,LDLR,LDLR,LDLR,SPC24	137,137,137,137,137,137,66637
chrX:130414186-130414935	chrX	+	130414245	130414908	True	NM_001170961,NM_001170962,NM_001170963,NM_144967,NM_205833,NM_001555	chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,+,-,-	IGSF1,IGSF1,IGSF1,ARHGAP36,IGSF1,IGSF1	8546,8546,8178,-222080,8546,8546
chr13:52738934-52740046	chr13	+	52739073	52739922	True	NM_001146099,NM_002498,NR_027415,NM_152720,NM_021645	chr13,chr13,chr13,chr13,chr13	-,-,-,-,+	NEK3,NEK3,NEK3,NEK3,UTP14C	-5077,-5077,-5077,-5403,-140297
chr11:3838303-3838644	chr11	+	3838311	3838687	True	NM_139131,NR_027018,NM_014489,NR_027016	chr11,chr11,chr11,chr11	-,+,+,+	NUP98,PGAP2,PGAP2,PGAP2	-19289,-9122,-8596,-8596
chr21:36096165-36096786	chr21	+	36096199	36096829	True	NM_004414,NR_024351	chr21,chr21	-,+	RCAN1,NCRNA00160	-108817,-145
chr14:24541314-24542243	chr14	+	24541418	24541874	True	NM_006032,NM_006177	chr14,chr14	+,-	CPNE6,NRL	-713,12008
chr19:55103332-55103696	chr19	+	55103403	55103723	True	NM_006863,NM_145057	chr19,chr19	+,-	LILRA1,CDC42EP5	1389,-118981
chr11:62555896-62556312	chr11	+	62556161	62556323	True	NM_199337,NM_001080501	chr11,chr11	+,-	TMEM179B,TMEM223	-1344,3213
chr9:138555422-138555920	chr9	+	138555427	138555969	True	NM_001001676,NM_182974	chr9,chr9	+,-	LCN9,GLT6D1	-310,-24041
chr11:65122880-65123104	chr11	+	65122952	65123152	True	NM_145719,NM_001077241	chr11,chr11	+,-	TIGD3,SLC25A45	-721,27040
chr3:170288128-170288463	chr3	+	170288299	170288490	True	NM_020949,NM_001185056	chr3,chr3	-,+	SLC7A14,CLDN11	15424,-149324
chr17:38598529-38599054	chr17	+	38598838	38598972	True	NM_001552,NM_001067	chr17,chr17	+,-	IGFBP4,TOP2A	703,-24636
chr3:56835174-56835463	chr3	+	56835181	56835447	True	NM_019555,NR_024460	chr3,chr3	-,+	ARHGEF3,CCDC66	598,-244048
chr5:79947819-79948505	chr5	+	79947892	79948266	True	NM_001190470,NM_002439,NM_000791	chr5,chr5,chr5	-,+,-	MTRNR2L2,MSH3,DHFR	-1038,2027,2588
chr2:9615177-9615720	chr2	+	9615249	9615543	True	NM_001039613,NM_022334	chr2,chr2	+,-	IAH1,ITGB1BP1	-631,-51606
chr11:34074746-34076065	chr11	+	34074856	34075977	True	NM_203364,NM_005574,NM_005898	chr11,chr11,chr11	+,-,+	CAPRIN1,LMO2,CAPRIN1	-1677,-161020,-1677
chr4:74120407-74121531	chr4	+	74120787	74121290	True	NM_032217,NM_000477,NM_198889	chr4,chr4,chr4	-,+,-	ANKRD17,ALB,ANKRD17	3265,148681,3265
chr2:232791256-232791609	chr2	+	232791398	232791652	True	NM_024409,NM_152383	chr2,chr2	-,+	NPPC,DIS3L2	-439,34640
chr3:169692788-169693484	chr3	+	169693148	169693501	True	NM_003262,NR_027622,NR_024409	chr3,chr3,chr3	+,-,-	SEC62,LOC100128164,LOC100128164	-8631,-8626,-8626
chr8:33368854-33369893	chr8	+	33368935	33369774	True	NM_001102401,NM_025115,NM_032509	chr8,chr8,chr8	-,-,+	C8orf41,C8orf41,MAK16	980,933,-26302
chr12:15942720-15942957	chr12	+	15942781	15942981	True	NM_004447,NM_007178	chr12,chr12	-,+	EPS8,STRAP	-271,92306
chr12:57647319-57648138	chr12	+	57647331	57647942	True	NM_145064,NM_001166357	chr12,chr12	-,+	STAC3,SHMT2	-2362,-23239
chr1:197882017-197882431	chr1	+	197882132	197882374	True	NM_001014434,NM_001195216,NM_020204	chr1,chr1,chr1	+,-,+	LHX9,DENND1B,LHX9	-548,-137509,4142
chr2:9612874-9613779	chr2	+	9613005	9613819	True	NM_001039613,NM_022334	chr2,chr2	+,-	IAH1,ITGB1BP1	850,-49362
chr2:71041220-71042170	chr2	+	71041223	71041943	True	NM_173535,NM_012476	chr2,chr2	-,+	CLEC4F,VAX2	5847,85776
chr4:113742364-113743278	chr4	+	113742573	113743265	True	NR_029857,NM_001127493	chr4,chr4	-,+	MIR302B,ANK2	-172860,-3399
chr20:3185789-3186956	chr20	+	3185820	3185916	True	NM_033453,NM_181493,NM_023935	chr20,chr20,chr20	+,+,-	ITPA,ITPA,DDRGK1	4139,4139,-525
chr5:153786279-153786505	chr5	+	153786419	153786535	True	NR_037897,NM_001131062	chr5,chr5	-,+	FLJ38109,SAP30L	38897,38981
chr5:43510148-43510751	chr5	+	43510272	43510507	True	NM_198566,NM_012343	chr5,chr5	-,+	C5orf34,NNT	4817,92283
chr3:121745040-121746894	chr3	+	121745040	121746762	True	NM_175924,NM_175862,NM_001199800,NM_001199799	chr3,chr3,chr3,chr3	-,+,-,-	ILDR1,CD86,ILDR1,ILDR1	-3913,27458,-3913,-3913
chr8:60029700-60030485	chr8	+	60029700	60030440	True	NM_005625,NM_014729	chr8,chr8	+,-	SDCBP,TOX	-564028,1377
chr1:213180824-213181364	chr1	+	213180823	213181099	True	NM_144567,NM_001136138	chr1,chr1	-,+	ANGEL2,RPS6KC1	8126,43488
chr5:44809046-44809640	chr5	+	44809084	44809608	True	NM_004465,NM_016640	chr5,chr5	-,+	FGF10,MRPS30	-420300,-108
chr20:5931219-5931536	chr20	+	5931218	5931538	True	NM_015939,NM_032485,NM_182802	chr20,chr20,chr20	-,+,+	TRMT6,MCM8,MCM8	-45,29,29
chr9:92255094-92255402	chr9	+	92255187	92255377	True	NR_024280,NM_006378	chr9,chr9	+,-	LOC100129066,SEMA4D	-540,-160576
chr16:27898938-27899534	chr16	+	27899021	27899416	True	NM_015202,NM_144675	chr16,chr16	+,-	KIAA0556,GSG1L	-337604,112
chr14:64318653-64319231	chr14	+	64318937	64319279	True	NM_182914,NM_015180,NM_030791	chr14,chr14,chr14	+,+,-	SYNE2,SYNE2,SGPP1	403,403,-124181
chr19:51303515-51303715	chr19	+	51303524	51303628	True	NR_003067,NR_003069,NR_003068,NM_033068,NM_199249,NM_199250	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,+,-,-	SNORD88A,SNORD88C,SNORD88B,ACPT,C19orf48,C19orf48	-732,2100,-1142,-9903,4396,4394
chr11:75530684-75531693	chr11	+	75531308	75531750	True	NM_003369,NM_207577	chr11,chr11	+,-	UVRAG,MAP6	-5154,-151829
chrX:24070636-24071757	chrX	+	24070986	24071629	True	NM_030624,NM_001415	chrX,chrX	-,+	KLHL15,EIF2S3	-25683,1435
chr17:8150786-8151212	chr17	+	8150928	8151196	True	NM_025099,NM_012393	chr17,chr17	-,+	CTC1,PFAS	267,1399
chr12:122036616-122037468	chr12	+	122036690	122037312	True	NM_032590,NM_032790	chr12,chr12	-,+	KDM2B,ORAI1	-17770,27142
chr16:2318969-2319196	chr16	+	2318969	2319045	True	NR_037448,NM_080594,NM_006711,NR_030636	chr16,chr16,chr16,chr16	+,-,-,+	MIR3677,RNPS1,RNPS1,MIR940	1668,-556,-1111,2702
chr1:3775298-3776207	chr1	+	3775298	3776008	True	NM_004402,NM_014704	chr1,chr1	+,-	DFFB,KIAA0562	-1504,-1501
chr1:1824062-1824917	chr1	+	1824099	1824872	True	NM_002074,NM_138705	chr1,chr1	-,+	GNB1,CALML6	-1573,21393
chr3:50328770-50329032	chr3	+	50328830	50329026	True	NM_001200016,NM_001200029,NM_003549,NM_001200030,NM_001200031,NM_001200032,NM_012191,NM_001200018,NM_153215,NM_006764	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,-,-,-,-,+,-	NAT6,HYAL3,HYAL3,HYAL3,HYAL3,HYAL3,NAT6,NAT6,C3orf45,IFRD2	7876,7317,7923,7923,7923,7923,7876,7344,-12363,1050
chr15:77581125-77581897	chr15	+	77581317	77581915	True	NM_018200,NM_024776	chr15,chr15	+,-	HMG20A,PEAK1	131327,-3984
chr5:44393704-44395038	chr5	+	44393812	44395058	True	NM_004465,NM_016640	chr5,chr5	-,+	FGF10,MRPS30	-5028,413968
chr1:38158092-38159364	chr1	+	38158107	38158995	True	NM_017850,NM_018101	chr1,chr1	-,+	C1orf109,CDCA8	-1915,1
chr5:10246468-10248002	chr5	+	10246589	10248027	True	NM_199133,NM_012073	chr5,chr5	-,+	FAM173B,CCT5	2037,2254
chr1:26183530-26183951	chr1	+	26183582	26183707	True	NM_024037,NM_001099626	chr1,chr1	-,+	C1orf135,FAM54B	2202,-36314
chr17:34840436-34841739	chr17	+	34840775	34841671	True	NM_004773,NM_001040282	chr17,chr17	+,-	ZNHIT3,TBC1D3G	801,-32672
chr17:1181690-1182234	chr17	+	1181985	1182211	True	NM_001159746,NM_001164405,NM_172367	chr17,chr17,chr17	-,+,+	ABR,BHLHA9,TUSC5	-91369,-8179,745
chr20:34329867-34330295	chr20	+	34329991	34330343	True	NM_184234,NM_004902,NM_016436	chr20,chr20,chr20	-,-,+	RBM39,RBM39,PHF20	-54,-54,29579
chrX:71789463-71790933	chrX	+	71789463	71790620	True	NM_018486,NM_001080851,NM_001166448,NM_001166419,NM_001166418,NM_001166422,NM_001166420	chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,+,-,-,-,-,-	HDAC8,DMRTC1B,HDAC8,HDAC8,HDAC8,HDAC8,HDAC8	2384,274255,2384,2384,2384,2384,2384
chr16:1018215-1018854	chr16	+	1018283	1018823	True	NR_033646,NM_014587,NM_022773	chr16,chr16,chr16	-,+,-	LMF1,SOX8,LMF1	2211,12984,2211
chr9:138985631-138985913	chr9	+	138985721	138985941	True	NM_015597,NM_144653	chr9,chr9	+,-	GPSM1,NACC2	235990,1240
chr17:66093517-66094275	chr17	+	66093825	66094013	True	NM_181656,NR_027418	chr17,chr17	-,+	C17orf58,LOC100499466	-104060,3682
chr4:84457409-84457665	chr4	+	84457457	84457689	True	NM_032717,NM_139076	chr4,chr4	+,-	AGPAT9,FAM175A	-37,-51167
chr11:75432473-75433464	chr11	+	75432642	75433486	True	NM_025098,NM_207577	chr11,chr11	+,-	MOGAT2,MAP6	-3760,-53163
chr12:56654512-56654929	chr12	+	56654730	56654908	True	NM_173595,NM_144576,NM_001099337	chr12,chr12,chr12	-,+,+	ANKRD52,COQ10A,COQ10A	-2587,5733,6158
chr17:64299541-64299972	chr17	+	64299556	64299844	True	NM_002737,NM_000042	chr17,chr17	+,-	PRKCA,APOH	-681,-74000
chr8:11322828-11323449	chr8	+	11322892	11323498	True	NM_001715,NM_053279	chr8,chr8	+,-	BLK,FAM167A	28022,828
chr20:43937175-43938966	chr20	+	43937524	43938821	True	NM_003833,NM_030592,NM_030590,NM_014276	chr20,chr20,chr20,chr20	-,-,-,+	MATN4,MATN4,MATN4,RBPJL	-557,-557,-557,-2084
chr5:122423778-122424068	chr5	+	122423781	122424111	True	NM_001136239,NM_000943	chr5,chr5	+,-	PRDM6,PPIC	729,-51356
chr19:5719453-5719743	chr19	+	5719459	5719759	True	NM_152784,NM_004793	chr19,chr19	+,-	TMEM146,LONP1	928,467
chr11:69489123-69489459	chr11	+	69489146	69489456	True	NM_053056,NM_153451	chr11,chr11	+,-	CCND1,ORAOV1	-33324,759
chr4:170546101-170547110	chr4	+	170546313	170546985	True	NM_012224,NM_173872,NM_001829	chr4,chr4,chr4	-,+,+	NEK1,CLCN3,CLCN3	-12535,-4642,-4642
chr14:50355146-50356005	chr14	+	50355219	50355493	True	NM_004713,NM_001663	chr14,chr14	-,+	NEMF,ARF6	-35680,4242
chr11:126227503-126228107	chr11	+	126227503	126227981	True	NM_006278,NR_033839	chr11,chr11	+,-	ST3GAL4,FLJ39051	-1463,-2021
chr1:9133156-9133866	chr1	+	9133235	9133843	True	NM_001215,NM_003039,NM_001135585	chr1,chr1,chr1	+,-,-	CA6,SLC2A5,SLC2A5	-127364,-3348,-3348
chr16:31893079-31894854	chr16	+	31893399	31894877	True	NR_002827,NM_003414	chr16,chr16	-,+	HERC2P4,ZNF267	269056,-8371
chr18:21018447-21019674	chr18	+	21018465	21019542	True	NM_003831,NM_032933	chr18,chr18	+,-	RIOK3,C18orf45	13244,-540
chr17:40912141-40912386	chr17	+	40912153	40912429	True	NR_024462,NR_024461,NM_005854	chr17,chr17,chr17	-,-,+	LOC100190938,LOC100190938,RAMP2	896,896,782
chr17:41399210-41399761	chr17	+	41399518	41399580	True	NR_027412,NM_145041	chr17,chr17	-,+	LOC100130581,TMEM106A	66736,-35675
chr17:1183531-1183855	chr17	+	1183535	1183795	True	NM_001159746,NM_001164405,NM_172367	chr17,chr17,chr17	-,+,+	ABR,BHLHA9,TUSC5	-92919,-9728,-629
chr11:84635204-84636230	chr11	+	84635252	84636263	True	NM_001364,NM_001193537	chr11,chr11	-,+	DLG2,TMEM126B	-787,703358
chr17:39262479-39264128	chr17	+	39262620	39263831	True	NM_031960,NM_001146041	chr17,chr17	-,+	KRTAP4-8,KRTAP4-9	-8245,-1030
chr20:57208466-57209469	chr20	+	57208608	57209316	True	NM_153360,NM_001001433	chr20,chr20	-,+	APCDD1L,STX16	-118659,16992
chr10:123728035-123728579	chr10	+	123728049	123728512	True	NM_206861,NM_017615,NM_001167865	chr10,chr10,chr10	+,-,-	TACC2,NSMCE4A,NSMCE4A	20176,6290,6290
chr19:8008293-8008570	chr19	+	8008369	8008619	True	NM_006351,NR_030717	chr19,chr19	-,+	TIMM44,SNAPC2	139,-22553
chr19:16249358-16249961	chr19	+	16249578	16250004	True	NM_032855,NM_054113	chr19,chr19	+,-	HSH2D,CIB3	-4791,34332
chr7:6895533-6896528	chr7	+	6895564	6895870	True	NM_198097,NM_173565	chr7,chr7	-,+	C7orf28B,RSPH10B	-29638,-101875
chr1:24126422-24126693	chr1	+	24126496	24126674	True	NM_001008216,NM_000403,NM_007260,NM_001127621	chr1,chr1,chr1,chr1	-,-,+,-	GALE,GALE,LYPLA2,GALE	670,410,-8901,-436
chr8:70984051-70984268	chr8	+	70984106	70984288	True	NM_024504,NM_001128206	chr8,chr8	-,+	PRDM14,SULF1	-544,-579129
chr18:74174520-74175999	chr18	+	74174542	74175878	True	NR_015417,NM_014643	chr18,chr18	+,-	LOC284276,ZNF516	64733,31319
chr2:96803484-96804245	chr2	+	96803523	96804031	True	NM_004418,NM_001037228,NM_001002036	chr2,chr2,chr2	-,+,-	DUSP2,LOC285033,ASTL	7198,101945,194
chr2:18061762-18062912	chr2	+	18061764	18062872	True	NM_024624,NM_002252	chr2,chr2	-,+	SMC6,KCNS3	-126668,-1878
chr17:73937466-73938232	chr17	+	73937495	73938239	True	NM_001080542,NM_001113324	chr17,chr17	-,+	FBF1,C17orf106	-376,37058
chr6:99866948-99867919	chr6	+	99867062	99867566	True	NM_032870,NM_015491,NM_001195131	chr6,chr6,chr6	-,-,+	SFRS18,SFRS18,LOC100130890	5702,5702,101303
chr17:10633321-10633858	chr17	+	10633444	10633512	True	NM_001004313,NM_020233	chr17,chr17	-,+	TMEM220,C17orf48	184,-32568
chr17:74536309-74536911	chr17	+	74536404	74536890	True	NM_134268,NM_001077620	chr17,chr17	-,+	CYGB,PRCD	-2622,-334
chr6:24489495-24489753	chr6	+	24489540	24489788	True	NM_170740,NM_001503,NM_001080,NM_177483	chr6,chr6,chr6,chr6	+,-,+,-	ALDH5A1,GPLD1,ALDH5A1,GPLD1	5408,112,5408,61
chr2:233790784-233791366	chr2	+	233790903	233791313	True	NM_001114090,NM_206895	chr2,chr2	-,+	NGEF,C2orf82	1598,-55967
chr3:169541226-169542459	chr3	+	169541433	169542254	True	NM_001080460,NM_001172780	chr3,chr3	+,-	LRRIQ4,LRRC34	-1782,-10859
chr5:24586710-24586974	chr5	+	24586827	24586902	True	NM_020227,NM_006727	chr5,chr5	+,-	PRDM9,CDH10	-1079164,58242
chrX:32166287-32167354	chrX	+	32166347	32167336	True	NM_004021,NM_004020,NM_004023,NM_004022,NM_203391,NM_004013	chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,+,-	DMD,DMD,DMD,DMD,GK,DMD	6300,6300,6300,6300,-1494930,6300
chr5:96084649-96086374	chr5	+	96084940	96086249	True	NR_033798,NM_016442	chr5,chr5	+,-	CAST,ERAP1	-5754,57702
chr2:25012063-25012882	chr2	+	25012357	25012615	True	NM_001013663,NM_001199803,NM_024322	chr2,chr2,chr2	-,+,+	C2orf79,CENPO,CENPO	3688,3559,3715
chr1:43890433-43891981	chr1	+	43890494	43891772	True	NM_001190880,NM_015284	chr1,chr1	-,+	HYI,KIAA0467	27938,-1748
chr1:220862935-220863531	chr1	+	220863025	220863424	True	NM_024709,NM_012414	chr1,chr1	+,-	C1orf115,RAB3GAP2	203,-417182
chr1:21057140-21057716	chr1	+	21057150	21057556	True	NM_001103160,NM_001103161,NM_032409	chr1,chr1,chr1	-,-,+	SH2D5,SH2D5,PINK1	1627,1627,-97253
chr2:132201734-132202267	chr2	+	132201764	132202192	True	NR_002826,NM_080386	chr2,chr2	-,+	LOC401010,TUBA3D	325,31473
chr1:17247397-17247655	chr1	+	17247511	17247655	True	NM_014675,NM_001135248	chr1,chr1	+,-	CROCC,MFAP2	789,59568
chr9:32948277-32949552	chr9	+	32948333	32949600	True	NM_001539,NM_001195249	chr9,chr9	+,-	DNAJA1,APTX	75608,52024
chr2:130690112-130690536	chr2	+	130690216	130690390	True	NR_026740,NM_032144	chr2,chr2	-,+	LOC389033,RAB6C	1550,46844
chr19:12038023-12039267	chr19	+	12038304	12039269	True	NM_144566,NM_001080411	chr19,chr19	+,-	ZNF700,ZNF433	-2455,107306
chr19:18549732-18550452	chr19	+	18549747	18550488	True	NM_032627,NM_001170939,NM_001170938,NM_016368	chr19,chr19,chr19,chr19	+,-,-,-	SSBP4,ISYNA1,ISYNA1,ISYNA1	-19652,-826,-636,-636
chr15:78633021-78633325	chr15	+	78633051	78633287	True	NM_004378,NM_025234	chr15,chr15	+,-	CRABP1,WDR61	-436,-41111
chr17:61958329-61958871	chr17	+	61958388	61958786	True	NM_020991,NM_022645,NM_022644,NM_022557,NM_022556,NR_002947,NM_002059,NM_022558	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,+,-,-	CSH2,CSH2,CSH2,GH2,GH2,TCAM1P,GH2,GH2	-7299,-7299,-7299,487,487,-24063,487,487
chr3:142291204-142293026	chr3	+	142291283	142292906	True	NM_001184,NM_001145319	chr3,chr3	-,+	ATR,PLS1	4812,22322
chr10:99894011-99894264	chr10	+	99894010	99894234	True	NM_014472,NM_018058	chr10,chr10	+,-	C10orf28,CRTAC1	146,-103425
chr15:86334966-86336612	chr15	+	86335303	86336641	True	NM_022480,NM_144767	chr15,chr15	-,+	KLHL25,AKAP13	1598,-115086
chr1:204485667-204485979	chr1	+	204485858	204486016	True	NM_001204171,NM_002646,NM_001204172,NR_024171,NM_002393	chr1,chr1,chr1,chr1,chr1	+,-,+,+,+	MDM4,PIK3C2B,MDM4,MDM4,MDM4	-404,-26384,-404,-404,-404
chr3:135112657-135114293	chr3	+	135112675	135114315	True	NM_178554,NM_001190447	chr3,chr3	-,+	KY,PPP2R3A	-742811,570199
chr20:51589206-51589438	chr20	+	51589417	51589488	True	NM_006526,NM_173485	chr20,chr20	-,+	ZNF217,TSHZ2	610203,-522
chr17:7589672-7589898	chr17	+	7589702	7589924	True	NM_001143992,NM_001143991,NM_001143990,NM_018081,NM_000546,NM_001126114,NM_001126112,NM_001126113	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,-,-,-,-	WRAP53,WRAP53,WRAP53,WRAP53,TP53,TP53,TP53,TP53	1742,833,-364,1742,989,989,989,989
chr2:239048647-239048963	chr2	+	239048690	239048984	True	NM_198582,NM_030768	chr2,chr2	+,-	KLHL30,ILKAP	-1379,63390
chr17:655906-656245	chr17	+	655991	656243	True	NM_015721,NR_024120	chr17,chr17	-,+	GEMIN4,DBIL5P	-490,-142
chr4:52885334-52886603	chr4	+	52885352	52886536	True	NM_145263,NM_001024611	chr4,chr4	+,-	SPATA18,LRRC66	31056,-1566
chr19:53728113-53728492	chr19	+	53728121	53728430	True	NM_182609,NM_173856	chr19,chr19	-,+	ZNF677,VN1R2	29731,33114
chr8:143761421-143761695	chr8	+	143761442	143761700	True	NR_033343,NM_003724,NM_005672	chr8,chr8,chr8	+,-,+	PSCA,JRK,PSCA	-9767,-10041,173
chr1:45788861-45790034	chr1	+	45789475	45789841	True	NM_001048174,NM_032756	chr1,chr1	-,+	MUTYH,HPDL	15838,2703
chr10:63501996-63503283	chr10	+	63502138	63503301	True	NM_178505,NM_173554	chr10,chr10	-,+	TMEM26,C10orf107	-288930,-79483
chr11:107729571-107729921	chr11	+	107729652	107729891	True	NM_017515,NM_017516	chr11,chr11	-,+	SLC35F2,RAB39	74,69385
chr10:99266047-99267200	chr10	+	99266154	99267116	True	NM_022362,NM_024954	chr10,chr10	-,+	MMS19,UBTD1	-7788,-7437
chr10:75101270-75102688	chr10	+	75101389	75102567	True	NM_173348,NM_145170	chr10,chr10	+,-	FAM149B1,TTC18	-173574,16107
chr11:46865171-46866283	chr11	+	46865304	46866180	True	NM_014756,NM_001003676,NM_001008938	chr11,chr11,chr11	-,+,-	CKAP5,C11orf49,CKAP5	1720,92070,1720
chr4:68712915-68714544	chr4	+	68712998	68714567	True	NR_015439,NM_004262	chr4,chr4	+,-	LOC550112,TMPRSS11D	-146063,35199
chr12:71866239-71867359	chr12	+	71866343	71866974	True	NM_003667,NM_144982	chr12,chr12	+,-	LGR5,ZFC3H1	-32593,190826
chr17:40925743-40927562	chr17	+	40925859	40927580	True	NR_024462,NM_032353,NM_032387	chr17,chr17,chr17	-,+,+	LOC100190938,VPS25,WNK4	-12584,-456,5068
chr11:3209250-3209717	chr11	+	3209318	3209494	True	NR_027138,NM_145638	chr11,chr11	+,-	C11orf36,OSBPL5	30067,-22736
chr1:43833156-43833368	chr1	+	43833251	43833311	True	NM_022821,NM_001255	chr1,chr1	-,+	ELOVL1,CDC20	438,-8676
chr10:70658715-70659081	chr10	+	70658767	70659081	True	NM_024045,NM_152707	chr10,chr10	+,-	DDX50,SLC25A16	1952,-371487
chr19:49574735-49574985	chr19	+	49574934	49575010	True	NM_031886,NM_006179,NM_003089	chr19,chr19,chr19	-,-,+	KCNA7,NTF4,SNRNP70	1238,-7810,13454
chr1:248906322-248907004	chr1	+	248906361	248906958	True	NM_001085474,NR_036070	chr1,chr1	-,+	LOC646627,MIR3124	-3210,213617
chr14:23443875-23444789	chr14	+	23443911	23444629	True	NM_001099780,NM_198086,NM_032876	chr14,chr14,chr14	+,-,-	PSMB11,JUB,JUB	66746,1853,7269
chr2:24300549-24301913	chr2	+	24300587	24301958	True	NM_147184,NM_054033,NM_004881,NM_016047	chr2,chr2,chr2,chr2	-,+,-,-	TP53I3,FKBP1B,TP53I3,SF3B14	5747,-28054,5820,-1273
chr16:2286613-2286828	chr16	+	2286618	2286800	True	NM_001374,NM_001178029	chr16,chr16	+,-	DNASE1L2,ECI1	-201,14852
chr2:201451044-201451870	chr2	+	201451130	201451679	True	NM_001159,NM_152387	chr2,chr2	+,-	AOX1,KCTD18	-450,-76338
chr15:25448247-25448453	chr15	+	25448283	25448499	True	NR_003315,NR_003314,NR_003313,NR_003312,NR_003311,NR_003310,NR_022010,NR_003308,NR_003309,NM_130838,NR_003305,NR_003306,NR_003307	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,-,+,+,+	SNORD115-23,SNORD115-22,SNORD115-21,SNORD115-20,SNORD115-19,SNORD115-18,PAR4,SNORD115-16,SNORD115-17,UBE3A,SNORD115-13,SNORD115-14,SNORD115-15	8443,6565,2909,2909,10,10,8339,-3739,10,202204,-9866,-8266,2909
chr15:25448247-25448453	chr15	+	25449557	25449607	False	NR_003315,NR_003314,NR_003313,NR_003312,NR_003311,NR_003310,NR_022010,NR_003495,NR_003308,NR_003309,NM_130838,NR_003306,NR_003307	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,+,-,+,+	SNORD115-23,SNORD115-22,SNORD115-21,SNORD115-20,SNORD115-19,SNORD115-18,PAR4,SNORD115-24,SNORD115-16,SNORD115-17,UBE3A,SNORD115-14,SNORD115-15	7335,5457,1801,1801,-104,-104,7231,9198,-5013,-104,201096,-9540,1801
chr20:34252924-34253229	chr20	+	34252957	34253192	True	NM_080748,NM_152838,NM_001198863,NM_006047,NM_001198838,NR_037188,NM_152928,NM_152925,NM_152926,NM_152927,NM_001198840	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,-,-,-,-,-,-,-,-,-,-	ROMO1,RBM12,CPNE1,RBM12,RBM12,CPNE1,CPNE1,CPNE1,CPNE1,CPNE1,RBM12	34039,-79,-79,-79,-79,-98,-79,-79,-79,-79,-79
chr1:27561068-27561268	chr1	+	27561072	27561140	True	NM_015023,NM_003047	chr1,chr1	+,-	WDTC1,SLC9A1	-116,-79621
chr12:4773307-4775177	chr12	+	4773411	4774761	True	NM_006422,NM_005002	chr12,chr12	-,+	AKAP3,NDUFA9	-19068,-15198
chr16:30420907-30421514	chr16	+	30420999	30421431	True	NM_024096,NM_001142305,NM_016643	chr16,chr16,chr16	-,+,+	DCTPP1,ZNF771,ZNF771	19996,-2318,-2318
chr16:86378403-86379119	chr16	+	86378414	86378967	True	NR_024406,NM_001451	chr16,chr16	-,+	LOC732275,FOXF1	368,165165
chr1:12041482-12041994	chr1	+	12041552	12041971	True	NM_001127660,NM_014874,NM_138346	chr1,chr1,chr1	+,+,-	MFN2,MFN2,KIAA2013	-1365,-1365,-55067
chrX:13670403-13671091	chrX	+	13670443	13671017	True	NM_001011658,NM_152634	chrX,chrX	-,+	TRAPPC2,TCEANC	81787,289
chr18:32350555-32350905	chr18	+	32350558	32350630	True	NM_001390,NM_001112734	chr18,chr18	+,-	DTNA,ZSCAN30	-14670,519616
chr8:38240718-38241131	chr8	+	38240850	38241175	True	NM_017778,NM_001199660,NM_023034,NM_001199659,NM_144652	chr8,chr8,chr8,chr8,chr8	-,+,-,+,+	WHSC1L1,LETM2,WHSC1L1,LETM2,LETM2	-1060,3473,-1060,2783,2783
chr7:130792730-130793013	chr7	+	130792846	130792933	True	NR_015431,NM_001145354,NR_024153	chr7,chr7,chr7	-,+,-	FLJ43663,MKLN1,FLJ43663	680,1921,-1057
chrX:105065100-105065381	chrX	+	105065115	105065316	True	NM_198465,NM_000354	chrX,chrX	+,-	NRK,SERPINA7	1219,217459
chr19:49250840-49252129	chr19	+	49251249	49252136	True	NM_019113,NM_000148,NM_017805,NM_182575	chr19,chr19,chr19,chr19	+,-,-,-	FGF21,FUT1,RASIP1,IZUMO1	7207,6568,-7279,-1083
chr7:72722932-72723174	chr7	+	72722935	72723057	True	NM_148956,NM_001168348,NM_018044,NM_001135211,NM_001168347	chr7,chr7,chr7,chr7,chr7	-,-,-,+,-	NSUN5,NSUN5,NSUN5,FKBP6,NSUN5	-71,-71,-71,19097,-71
chr6:27857694-27858532	chr6	+	27857865	27858581	True	NM_003514,NM_003527,NM_003535	chr6,chr6,chr6	-,+,-	HIST1H2AM,HIST1H2BO,HIST1H3J	2432,2621,39
chr1:36187147-36188390	chr1	+	36187340	36188197	True	NM_017629,NM_152374	chr1,chr1	+,-	EIF2C4,C1orf216	85630,-2550
chr9:128460919-128461578	chr9	+	128461058	128461318	True	NM_001006621,NM_001006619,NM_024117,NM_001006620,NM_006195,NM_001006617,NM_001006618	chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,-,-,-,+,-,-	MAPKAP1,MAPKAP1,MAPKAP1,MAPKAP1,PBX3,MAPKAP1,MAPKAP1	8245,8245,8245,8245,48298,8245,8245
chr3:184096037-184097228	chr3	+	184096290	184097206	True	NM_001177598,NM_003741,NM_000460,NM_001177597	chr3,chr3,chr3,chr3	-,+,-,-	THPO,CHRD,THPO,THPO	-358,654,-358,-358
chr1:202976028-202976250	chr1	+	202976088	202976296	True	NR_036557,NM_138391,NM_001079809	chr1,chr1,chr1	-,+,+	LOC401980,TMEM183A,TMEM183B	147,237,239
chr10:127405971-127407175	chr10	+	127406165	127406729	True	NM_001202438,NM_015608,NR_033847	chr10,chr10,chr10	+,+,-	C10orf137,C10orf137,FLJ37035	1354,1354,1388
chr3:108236608-108237557	chr3	+	108236681	108237419	True	NM_014648,NM_014981	chr3,chr3	+,-	DZIP3,MYH15	70917,10808
chr1:59015319-59016728	chr1	+	59015544	59016624	True	NR_034014,NM_145243	chr1,chr1	+,-	LOC100131060,OMA1	234198,-3098
chr17:41837687-41838505	chr17	+	41837767	41838352	True	NM_025237,NM_001136483	chr17,chr17	-,+	SOST,C17orf105	-1611,19450
chr4:71768573-71769790	chr4	+	71768601	71769645	True	NM_002092,NM_173468	chr4,chr4	-,+	GRSF1,MOBKL1A	-62974,-588
chr3:130456358-130457966	chr3	+	130456817	130457902	True	NM_014602,NM_001199181	chr3,chr3	-,+	PIK3R4,ATP2C1	7844,111466
chr16:29912039-29912451	chr16	+	29912142	29912390	True	NM_012410,NM_181718,NM_001114100,NM_001114099,NM_201575	chr16,chr16,chr16,chr16,chr16	-,+,-,-,-	SEZ6L2,ASPHD1,SEZ6L2,SEZ6L2,SEZ6L2	-1562,-46,-1562,-1562,-1562
chr3:50605384-50605760	chr3	+	50605564	50605796	True	NM_016173,NM_001171743,NM_016210,NM_001171741,NM_001171740	chr3,chr3,chr3,chr3,chr3	+,-,-,-,-	HEMK1,C3orf18,C3orf18,C3orf18,C3orf18	1112,-341,-341,2712,-341
chr20:819045-820325	chr20	+	819044	820241	True	NM_031424,NM_033409,NM_001042353,NM_207121	chr20,chr20,chr20,chr20	+,-,+,+	FAM110A,C20orf54,FAM110A,FAM110A	5043,-69816,-4739,-2384
chr8:37963676-37964116	chr8	+	37963736	37963934	True	NM_004674,NM_000349,NM_001105214	chr8,chr8,chr8	+,-,+	ASH2L,STAR,ASH2L	-776,44716,-438
chrX:85341357-85342037	chrX	+	85341365	85341920	True	NM_001145414,NM_001139514	chrX,chrX	-,+	CHM,DACH2	-38799,61534
chr2:6634597-6635157	chr2	+	6634604	6634954	True	NM_207315,NM_080657	chr2,chr2	-,+	CMPK2,RSAD2	371032,382841
chr20:447823-448636	chr20	+	447989	448572	True	NM_144628,NM_031229	chr20,chr20	-,+	TBC1D20,RBCK1	-4802,-59345
chr7:63961391-63962503	chr7	+	63961487	63962285	True	NM_178558,NR_029404	chr7,chr7	-,+	ZNF680,LOC649395	61270,-67467
chr7:74284894-74285695	chr7	+	74285281	74285733	True	NM_173537,NR_027775	chr7,chr7	-,+	GTF2IRD2,PMS2P5	-17440,21160
chr4:15385137-15386224	chr4	+	15385141	15386147	True	NM_001193534,NM_001135171	chr4,chr4	-,+	FBXL5,C1QTNF7	270947,-9017
chr12:69634478-69635383	chr12	+	69634497	69635402	True	NM_007007,NR_031692	chr12,chr12	+,-	CPSF6,MIR1279	-1231,31646
chr1:151485721-151487685	chr1	+	151486018	151487369	True	NM_145796,NM_020770	chr1,chr1	-,+	POGZ,CGN	-54077,-2215
chr8:39380519-39382419	chr8	+	39380625	39382150	True	NM_001190956,NR_024106,NR_024107,NR_001569	chr8,chr8,chr8,chr8	+,-,-,-	ADAM18,ADAM3A,ADAM3A,ADAM3A	59936,-155,-155,-155
chr3:192126246-192126526	chr3	+	192126385	192126521	True	NM_020386,NM_021032	chr3,chr3	+,-	HRASLS,FGF12	832396,367
chr21:32928330-32929824	chr21	+	32928330	32929747	True	NM_000454,NM_003253	chr21,chr21	+,-	SOD1,TIAM1	102187,1601
chr22:43114945-43115997	chr22	+	43115039	43116017	True	NR_029422,NM_017436	chr22,chr22	+,-	RNU12,A4GALT	-103839,909
chr12:130822491-130822727	chr12	+	130822491	130822697	True	NR_033834,NM_004764,NM_001190971	chr12,chr12,chr12	-,+,+	FLJ31485,PIWIL1,PIWIL1	-176268,-109,-109
chr19:9610004-9611340	chr19	+	9610316	9611239	True	NM_152476,NM_001172651	chr19,chr19	-,+	ZNF560,ZNF177	-1037,-123381
chr2:108992001-108993842	chr2	+	108992163	108993636	True	NR_024439,NM_006588	chr2,chr2	-,+	LOC729121,SULT1C4	-549580,784
chr10:35108289-35108560	chr10	+	35108432	35108560	True	NM_019619,NM_001184789,NM_001184788,NM_001184790,NM_001184791,NM_001184792,NM_001184793,NM_001184787,NM_001184786,NM_001184785,NM_001184794,NM_001881	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,-,-,-,-,-,-,-,+	PARD3,PARD3,PARD3,PARD3,PARD3,PARD3,PARD3,PARD3,PARD3,PARD3,PARD3,CREM	-4179,-4179,-4179,-4179,-4179,-4179,-4179,-4179,-4179,-4179,-4179,307240
chr16:66875482-66876739	chr16	+	66875510	66876716	True	NM_001014435,NM_005182,NM_003905	chr16,chr16,chr16	+,+,-	CA7,CA7,NAE1	2124,1565,-10631
chr22:39963566-39964877	chr22	+	39963640	39964798	True	NM_001003406,NM_194326,NM_021096	chr22,chr22,chr22	+,-,+	CACNA1I,RPS19BP1,CACNA1I	1959,-34780,1959
chr3:49461373-49462417	chr3	+	49461618	49462414	True	NR_028435,NM_022171,NM_000481,NM_032316,NM_001164712,NM_001164710,NM_001164711	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-,-	AMT,TCTA,AMT,NICN1,AMT,AMT,AMT	-1507,-12030,-1507,4393,-1507,-1507,-1507
chr8:145047985-145048371	chr8	+	145048047	145048369	True	NM_201378,NM_000837,NM_000445	chr8,chr8,chr8	-,+,-	PLEC,GRINA,PLEC	-350,15856,2594
chr20:25369735-25370560	chr20	+	25369927	25370425	True	NM_015600,NM_021067,NM_001042472	chr20,chr20,chr20	-,+,-	ABHD12,GINS1,ABHD12	1243,17897,1243
chr18:33077934-33078448	chr18	+	33077954	33078356	True	NM_001098817,NM_020474,NM_194281	chr18,chr18,chr18	-,+,-	INO80C,GALNT1,INO80C	1,156176,1
chr4:128982027-128982249	chr4	+	128982048	128982122	True	NM_032239,NM_018078,NM_178043,NM_152778	chr4,chr4,chr4,chr4	+,+,+,-	LARP1B,LARP1B,LARP1B,MFSD8	380,380,380,-94909
chr17:18684906-18685540	chr17	+	18684972	18685451	True	NM_016078,NM_001145045	chr17,chr17	+,-	FAM18B1,ZNF286B	-441,-99400
chr17:18684906-18685540	chr17	-	15465917	15466336	False	NM_145301,NM_001135036,NR_037924,NM_001204478,NM_001130842	chr17,chr17,chr17,chr17,chr17	-,-,-,-,+	FAM18B2,FAM18B2,FAM18B2-CDRT4,FAM18B2-CDRT4,ZNF286A	671,671,671,671,136554
chrY:23982068-23982459	chrY	+	23982154	23982457	True	NM_001006120,NM_001006118	chrY,chrY	+,-	RBMY1D,RBMY1E	-285401,58227
chrY:23982068-23982459	chrY	-	8880534	8880585	False	NR_001548,NR_001549	chrY,chrY	-,+	TTTY11,TTTY19	-195111,-308073
chr2:114390351-114392238	chr22	-	51214675	51216240	False	NM_001003789,NM_001130919,NM_001130920,NM_001130921,NM_001130922,NM_001130923	chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,-,-	RABL2B,RABL2B,RABL2B,RABL2B,RABL2B,RABL2B	5897,5897,5897,5897,5897,5897
chr2:114390351-114392238	chr2	+	114390666	114392231	True	NM_007082,NR_000029,NM_013412,NR_024529,NR_024528,NR_024530,NR_024531	chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,-,+,-,-,-,-	RABL2A,RPL23AP7,RABL2A,RPL23AP7,RPL23AP7,RPL23AP7,RPL23AP7	-5900,-5951,-5900,-5951,-5951,-5951,-5951
chrX:101397433-101397809	chrX	+	101397470	101397770	True	NM_001006938,NM_080390	chrX,chrX	-,+	TCEAL6,TCEAL2	-82,-16861
chr8:23562818-23563030	chr8	+	23562847	23563073	True	NM_016612,NM_001136271	chr8,chr8	+,-	SLC25A37,NKX2-6	-176535,899
chr5:53820618-53821380	chr5	+	53820640	53821403	True	NM_052870,NM_001145427,NM_019087,NM_001102575	chr5,chr5,chr5,chr5	+,+,-,+	SNX18,SNX18,ARL15,SNX18	-7098,-7102,-214237,-7098
chr11:65236074-65236436	chr11	+	65236303	65236453	True	NR_030343,NM_182556	chr11,chr11	+,-	MIR612,SLC25A45	-24430,-86161
chr2:220145187-220145416	chr2	+	220145196	220145414	True	NM_001039550,NR_029688,NM_006736	chr2,chr2,chr2	+,-,+	DNAJB2,MIR153-1,DNAJB2	-1207,13558,-1207
chr15:59227534-59228503	chr15	+	59227710	59228415	True	NM_001013843,NM_024755,NM_017610	chr15,chr15,chr15	-,-,+	SLTM,SLTM,RNF111	-1858,-1858,51449
chr12:49933537-49933869	chr12	+	49933640	49933744	True	NM_012284,NM_001012300	chr12,chr12	+,-	KCNH3,MCRS1	-751,26528
chr7:43968743-43970645	chr7	+	43969347	43969993	True	NM_001077664,NM_015983	chr7,chr7	-,+	URGCP,UBE2D4	-3351,-3370
chr14:69260408-69260620	chr14	+	69260416	69260624	True	NM_004926,NM_207442,NM_001193360	chr14,chr14,chr14	-,-,+	ZFP36L1,C14orf181,EXD2	-631,2616,397569
chr1:55505445-55505739	chr1	+	55505448	55505740	True	NM_014762,NM_174936	chr1,chr1	-,+	DHCR24,PCSK9	-152527,-350
chr19:4153656-4153930	chr19	+	4153718	4153790	True	NM_032607,NM_001193285	chr19,chr19	+,-	CREB3L3,SIRT6	-140,28856
chr2:64074886-64076780	chr2	+	64075145	64076797	True	NM_006759,NM_001001521,NM_001005739	chr2,chr2,chr2	+,+,-	UGP2,UGP2,VPS54	-6196,-7112,169477
chr2:201727831-201728248	chr2	+	201727915	201728003	True	NR_027856,NM_001162407,NR_027855,NM_001136039,NM_004071	chr2,chr2,chr2,chr2,chr2	-,-,-,+,-	CLK1,CLK1,CLK1,NIF3L1,CLK1	1514,1331,1514,26046,1514
chr22:21367282-21368025	chr22	+	21367387	21367975	True	NM_001159554,NR_003608,NM_005446	chr22,chr22,chr22	+,-,+	P2RX6,MGC16703,P2RX6	1466,651,1488
chr16:1386620-1386851	chr16	+	1386621	1386845	True	NM_001001410,NM_001199098,NM_001199099,NM_003933,NM_001199097,NM_001199096	chr16,chr16,chr16,chr16,chr16,chr16	-,+,+,+,+,+	C16orf42,BAIAP3,BAIAP3,BAIAP3,BAIAP3,BAIAP3	15078,-3066,-3066,-2167,-3066,-474
chr21:45586045-45586325	chr21	+	45586173	45586351	True	NM_198155,NM_015259	chr21,chr21	+,-	C21orf33,ICOSLG	-32730,74533
chr5:134873045-134874144	chr5	+	134873234	134874135	True	NM_145282,NM_006161	chr5,chr5	+,-	SLC25A48,NEUROG1	296229,-1595
chr21:34697034-34697670	chr21	+	34697325	34697603	True	NM_000629,NR_024102,NM_006134	chr21,chr21,chr21	+,-,-	IFNAR1,C21orf54,TMEM50B	-162,-154784,154728
chr18:32099857-32100862	chr18	+	32099926	32100913	True	NM_003787,NM_032975	chr18,chr18	-,+	NOL4,DTNA	-296411,-26735
chr2:102623273-102625220	chr2	+	102623527	102625073	True	NM_173343,NM_001145664	chr2,chr2	+,-	IL1R2,RFX8	-8119,-532362
chr9:130217983-130218290	chr9	+	130218009	130218339	True	NM_001005374,NM_001190723,NM_001005373,NM_138361,NR_002449,NM_000976	chr9,chr9,chr9,chr9,chr9,chr9	+,+,+,+,-,-	LRSAM1,LRSAM1,LRSAM1,LRSAM1,SNORA65,RPL12	-3526,-4295,-4295,-4271,-7093,-4298
chr20:61428981-61429353	chr20	+	61429028	61429386	True	NM_007346,NM_018270,NM_006602	chr20,chr20,chr20	+,+,-	OGFR,C20orf20,TCFL5	6790,-1274,63779
chr1:43127716-43129158	chr1	+	43127728	43128802	True	NM_006347,NM_001123395	chr1,chr1	+,-	PPIH,CLDN19	-3731,77173
chr3:69434389-69434933	chr3	+	69434415	69434947	True	NM_006407,NM_015123	chr3,chr3	+,-	ARL6IP5,FRMD4B	-300376,533
chr10:93372511-93373537	chr10	+	93372510	93373563	True	NM_025235,NR_024467	chr10,chr10	+,-	TNKS2,LOC100188947	184587,-1293
chr20:44237933-44239502	chr20	+	44238351	44239529	True	NM_147198,NM_080753	chr20,chr20	-,+	WFDC9,WFDC10A	20428,18855
chr12:93810089-93810467	chr12	+	93810088	93810517	True	NM_003348,NR_002212	chr12,chr12	-,+	UBE2N,NUDT4P1	25560,-38399
chr7:131375167-131375466	chr7	+	131375271	131375499	True	NM_005397,NM_013255	chr7,chr7	-,+	PODXL,MKLN1	-133895,-362728
chr1:156553257-156554126	chr1	+	156553345	156554166	True	NM_144772,NM_178229,NM_001105669	chr1,chr1,chr1	+,-,+	APOA1BP,IQGAP3,TTC24	7391,-10949,-3877
chr11:64544546-64544975	chr11	+	64544551	64544975	True	NM_001178030,NM_001178031,NM_004630,NR_033649,NM_006244,NM_201995,NM_201997,NM_201998,NR_033650	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,+,-,-,-,-	SF1,SF1,SF1,SF1,PPP2R5B,SF1,SF1,SF1,SF1	1013,307,1391,1391,147167,1391,1391,1391,1391
chr2:115918380-115918768	chr2	+	115918507	115918713	True	NR_036580,NM_001004360,NM_001178034	chr2,chr2,chr2	-,+,+	LOC389023,DPP10,DPP10	257,970,799
chr4:152089067-152090439	chr4	+	152089262	152090358	True	NR_000007,NM_001128924	chr4,chr4	+,-	SNORD73A,SH3D19	-64345,6408
chr22:24234732-24236256	chr22	+	24234803	24235903	True	NM_198440,NM_002415	chr22,chr22	-,+	DERL3,MIF	-53604,661
chr7:104895637-104897190	chr7	+	104895731	104897222	True	NM_182931,NM_182691	chr7,chr7	+,-	MLL5,SRPK2	-241145,12305
chr7:150211035-150211818	chr7	+	150211141	150211863	True	NM_024711,NM_153236	chr7,chr7	-,+	GIMAP6,GIMAP7	117867,81
chr12:50026660-50027301	chr12	+	50026823	50027301	True	NM_012272,NM_001031698,NM_032130	chr12,chr12,chr12	+,+,-	PRPF40B,PRPF40B,FAM186B	-9471,-2547,-27390
chr2:105046820-105047211	chr2	+	105046950	105047210	True	NR_015399,NR_037885	chr2,chr2	+,-	LOC150568,LOC100287010	3594,-22160
chr2:87756944-87757355	chr2	+	87756958	87757344	True	NM_001078170,NR_024206,NR_024204,NR_024205	chr2,chr2,chr2,chr2	-,+,+,+	RGPD2,NCRNA00152,NCRNA00152,NCRNA00152	367992,-2037,-2037,-2037
chr2:87756944-87757355	chr2	-	112250267	112250653	False	NR_024373,NM_207003,NR_015395	chr2,chr2,chr2	-,+,-	LOC541471,BCL2L11,LOC541471	2091,-371827,2091
chr10:91061632-91062601	chr10	+	91061755	91062567	True	NM_001547,NM_000235	chr10,chr10	+,-	IFIT2,LIPA	-101,-50095
chr10:135169442-135170009	chr10	+	135169501	135170009	True	NM_001145201,NM_145202,NM_001098483,NM_198472	chr10,chr10,chr10,chr10	+,+,-,-	PRAP1,PRAP1,C10orf125,C10orf125	-8708,-8708,1570,1570
chr7:22397033-22398113	chr7	+	22397272	22397961	True	NM_012294,NM_000600	chr7,chr7	-,+	RAPGEF5,IL6	-739,368804
chr5:137666587-137667156	chr5	+	137666711	137667155	True	NM_001135647,NM_001790,NM_022809,NM_016605	chr5,chr5,chr5,chr5	+,-,-,+	FAM53C,CDC25C,CDC25C,FAM53C	6068,411,411,6548
chr17:18644790-18645348	chr17	+	18644884	18645044	True	NM_001145045,NM_031456	chr17,chr17	-,+	ZNF286B,FBXW10	-59312,2281
chr17:18644790-18645348	chr17	-	15525342	15525392	False	NM_006382,NM_001130842	chr17,chr17	-,+	CDRT1,ZNF286A	-2324,77498
chr3:42808069-42809908	chr3	+	42808425	42809791	True	NM_001296,NM_144719	chr3,chr3	+,-	CCBP2,CCDC13	41172,5010
chr1:147143459-147145188	chr1	+	147143574	147145125	True	NM_004326,NM_016361	chr1,chr1	+,-	BCL9,ACP6	-130443,-940
chr12:53128498-53129036	chr12	+	53128548	53128938	True	NM_199187,NM_175078	chr12,chr12	+,-	KRT18,KRT77	213716,-31301
chr22:39374723-39375650	chr22	+	39375287	39375475	True	NM_014292,NM_004900	chr22,chr22	-,+	CBX6,APOBEC3B	-107029,2929
chr11:63661547-63662090	chr11	+	63661565	63661881	True	NM_017490,NM_173587	chr11,chr11	+,-	MARK2,RCOR2	-5629,22485
chr3:134096129-134097167	chr3	+	134096160	134097199	True	NM_001042383,NM_016201	chr3,chr3	+,-	CEP63,AMOTL2	107375,-2754
chr3:129799753-129800389	chr3	+	129799772	129800392	True	NM_001136152,NR_024252	chr3,chr3	+,-	ALG1L2,LOC729375	281,29934
chr15:44090540-44091081	chr15	+	44090558	44091117	True	NM_016400,NM_001033517,NM_001199885,NR_037673,NR_037672,NM_001199878,NM_001199876,NR_031695,NM_001199875,NM_001018108	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,-,+,+,+,+,+,-,+,+	C15orf63,SERINC4,C15orf63,SERF2-C15ORF63,SERF2,SERF2,SERF2,MIR1282,SERF2,SERF2	1501,1189,1501,-6436,-6436,-6035,-6436,-4601,-6436,-6570
chr10:104509625-104510551	chr10	+	104510208	104510286	True	NM_004311,NM_001083913	chr10,chr10	-,+	ARL3,C10orf26	-36018,-6543
chr9:131643926-131644257	chr9	+	131643988	131644126	True	NM_001127245,NM_001127244,NM_019594,NM_001122672,NM_001122671,NM_004059	chr9,chr9,chr9,chr9,chr9,chr9	+,+,+,-,-,-	LRRC8A,LRRC8A,LRRC8A,CCBL1,CCBL1,CCBL1	264,654,264,278,278,278
chr10:114711941-114712159	chr10	+	114711952	114712032	True	NM_030756,NM_001146283,NM_001198531,NM_001198530,NM_001146284,NM_001146285,NM_001146286,NM_001198526,NM_001198527,NM_001198525,NM_022494,NM_001198528,NM_001198529,NM_001146274	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,+,+,+,+,+,-,+,+,+	TCF7L2,TCF7L2,TCF7L2,TCF7L2,TCF7L2,TCF7L2,TCF7L2,TCF7L2,TCF7L2,TCF7L2,ZDHHC6,TCF7L2,TCF7L2,TCF7L2	-1994,-1994,-1994,-1994,-1994,-1994,-1994,-1994,-1994,-1994,-505280,-1994,-1994,-1994
chr17:4738175-4738643	chr17	+	4738198	4738606	True	NM_001024937,NM_182566,NM_170663,NM_153827,NM_015716	chr17,chr17,chr17,chr17,chr17	+,-,+,+,+	MINK1,VMO1,MINK1,MINK1,MINK1	-1622,-48469,-1622,-1622,-1622
chr11:43897668-43898928	chr11	+	43897952	43898875	True	NM_021926,NM_139178	chr11,chr11	-,+	ALX4,ALKBH3	432892,3481
chr4:117521075-117521356	chr4	+	117521095	117521363	True	NM_152402,NR_031737	chr4,chr4	-,+	TRAM1L1,MIR1973	485423,-300265
chr6:74405396-74405599	chr6	+	74405435	74405593	True	NM_001159587,NM_012434,NM_133493,NM_001159588	chr6,chr6,chr6,chr6	+,-,+,+	CD109,SLC17A5,CD109,CD109	11,-41698,17,11
chr3:44792510-44793309	chr3	+	44792610	44793324	True	NM_020242,NM_020696	chr3,chr3	+,-	KIF15,KIAA1143	9884,9899
chr6:26222899-26223321	chr6	+	26223104	26223348	True	NM_003518,NM_003532,NM_021052	chr6,chr6,chr6	-,+,+	HIST1H2BG,HIST1H3E,HIST1H2AE	-6232,2034,-6016
chr16:76327112-76328884	chr16	+	76327245	76328805	True	NM_005548,NM_033401,NM_138994	chr16,chr16,chr16	-,+,+	KARS,CNTNAP4,CNTNAP4	-645660,-16130,14929
chr15:101402713-101404166	chr15	+	101402835	101404141	True	NM_001040616,NM_000693	chr15,chr15	-,+	LINS,ALDH1A3	-260390,15867
chr19:21001621-21002823	chr19	+	21001642	21002647	True	NR_034060,NM_145297	chr19,chr19	+,-	ZNF85,ZNF626	103411,-157240
chr6:160514269-160514549	chr6	+	160514276	160514574	True	NR_003288,NM_003058	chr6,chr6	+,-	LOC729603,SLC22A2	-213,165439
chr18:14483866-14484848	chr18	+	14484377	14484440	True	NR_024076,NR_026756	chr18,chr18	-,+	CXADRP3,LOC284233	14318,-147008
chr16:22564129-22564434	chr16	+	22564293	22564434	True	NR_003676,NR_027460	chr16,chr16	+,-	LOC653786,RRN3P3	-7332,-115257
chr16:22564129-22564434	chr16	+	21748250	21748311	False	NM_170664,NR_003370	chr16,chr16	+,-	OTOA,RRN3P1	-32025,82235
chr3:42954322-42954790	chr3	+	42954525	42954827	True	NM_207404,NM_004391,NM_001134656	chr3,chr3,chr3	+,-,+	ZNF662,CYP8B1,ZNF662	-7184,-36892,-6928
chr1:183381651-183382832	chr1	+	183381654	183382704	True	NM_001174061,NM_015039	chr1,chr1	+,-	SMG7,NMNAT2	58801,4990
chr12:97074782-97075539	chr12	+	97074938	97075355	True	NM_002595,NM_001135176	chr12,chr12	-,+	CDK17,NEDD1	-280572,225645
chr6:134358781-134359299	chr6	+	134358823	134359237	True	NM_004865,NM_145176	chr6,chr6	+,-	TBPL1,SLC2A12	-84579,14610
chr19:39883826-39884060	chr19	+	39884048	39884108	True	NM_019088,NM_017592	chr19,chr19	-,+	PAF1,MED29	-2369,-2136
chr7:128113517-128113880	chr7	+	128113589	128113677	True	NM_183243,NM_018396	chr7,chr7	-,+	IMPDH1,METTL2B	-63553,3105
chr5:75380272-75380635	chr5	+	75380459	75380601	True	NM_001099271,NM_014979	chr5,chr5	-,+	POC5,SV2C	-367146,-1205
chr6:163158219-163158734	chr6	+	163158247	163158786	True	NM_013987,NM_001080379,NM_013988,NM_004562	chr6,chr6,chr6,chr6	-,+,-,-	PARK2,PACRG,PARK2,PARK2	-9413,-9296,-9413,-9413
chr17:8027543-8027906	chr17	+	8027628	8027952	True	NM_001165967,NR_036201,NM_021628,NM_001165960,NM_032580	chr17,chr17,chr17,chr17,chr17	-,+,-,-,-	HES7,MIR4314,ALOXE3,ALOXE3,HES7	-218,-36305,-5768,-5394,-218
chr3:113464899-113465113	chr3	+	113464915	113465051	True	NM_001690,NM_025146	chr3,chr3	+,-	ATP6V1A,NAA50	814,119
chr3:40350818-40351071	chr3	+	40350961	40351071	True	NM_005875,NR_033965	chr3,chr3	+,-	EIF1B,FLJ33065	101,168
chr12:57117883-57118297	chr12	+	57117891	57118248	True	NM_001113202,NM_001113203,NM_005594,NM_001113201,NM_003725	chr12,chr12,chr12,chr12,chr12	-,-,-,-,+	NACA,NACA,NACA,NACA,HSD17B6	1128,1128,868,868,38859
chr2:241629383-241630193	chr2	+	241629437	241630093	True	NM_198998,NM_001102467	chr2,chr2	+,-	AQP12A,AQP12B	1168,-7120
chr2:241629383-241630193	chr2	-	241624101	241624151	False	NM_198998,NM_001102467	chr2,chr2	+,-	AQP12A,AQP12B	7110,-1784
chr16:31516740-31517822	chr16	+	31516857	31517823	True	NM_022744,NM_016633	chr16,chr16	-,+	C16orf58,AHSP	1933,21379
chr9:73032177-73032997	chr9	+	73032177	73032669	True	NM_001206,NM_015110	chr9,chr9	-,+	KLF9,SMC5	-2604,-158353
chr10:90966399-90966715	chr10	+	90966450	90966664	True	NM_003956,NM_001547	chr10,chr10	-,+	CH25H,IFIT2	457,95041
chr6:160542736-160543355	chr6	+	160542736	160543384	True	NM_003058,NM_153187,NM_003057	chr6,chr6,chr6	-,+,+	SLC22A2,SLC22A1,SLC22A1	136629,-10,-10
chr4:41938091-41938593	chr4	+	41938091	41938281	True	NM_018126,NM_003924	chr4,chr4	+,-	TMEM33,PHOX2B	-1012,-187104
chr12:21710755-21711507	chr12	+	21711095	21711520	True	NM_030572,NM_021957	chr12,chr12	+,-	C12orf39,GYS2	-31897,46312
chr6:24500045-24501419	chr6	+	24500480	24501471	True	NM_170740,NM_001503,NM_001080	chr6,chr6,chr6	+,-,+	ALDH5A1,GPLD1,ALDH5A1	-5335,-10630,-5335
chr6:131602868-131604448	chr6	+	131602914	131604398	True	NM_001431,NM_138633	chr6,chr6	-,+	EPB41L2,AKAP7	-218452,-31461
chr11:17250168-17250493	chr11	+	17250214	17250290	True	NM_002645,NM_005013	chr11,chr11	-,+	PIK3C2A,NUCB2	-58860,47995
chr1:2483312-2483524	chr1	+	2483337	2483571	True	NR_037844,NR_026927,NM_003820	chr1,chr1,chr1	-,-,+	LOC100133445,LOC115110,TNFRSF14	4929,763,4233
chr1:2483312-2483524	chr1	-	2500970	2501024	False	NR_037844,NM_003820	chr1,chr1	-,+	LOC100133445,TNFRSF14	-12520,-13216
chr19:49535019-49535226	chr19	+	49535050	49535256	True	NR_024244,NM_033378,NM_033377,NR_004383,NM_000737	chr19,chr19,chr19,chr19,chr19	-,+,-,+,-	SNAR-G2,CGB2,CGB1,SNAR-G1,CGB	-6,17,4985,5020,-7457
chr19:8510654-8510895	chr19	+	8510683	8510833	True	NM_032152,NM_005968,NM_031203	chr19,chr19,chr19	-,+,+	PRAM1,HNRNPM,HNRNPM	56755,-931,-931
chr17:60002792-60003241	chr17	+	60002964	60003098	True	NR_026641,NM_020748,NM_001144933	chr17,chr17,chr17	-,-,+	INTS2,INTS2,EFCAB3	2329,2329,444480
chr2:232793452-232793809	chr2	+	232793548	232793827	True	NM_024409,NM_152383	chr2,chr2	-,+	NPPC,DIS3L2	-2589,32465
chr8:30582211-30583253	chr8	+	30582335	30582645	True	NM_001195103,NM_001195102,NM_000637,NM_005671,NM_001195104	chr8,chr8,chr8,chr8,chr8	-,-,-,+,-	GSR,GSR,GSR,UBXN8,GSR	2893,2893,2893,19044,2893
chr2:197791485-197791773	chr2	+	197791554	197791620	True	NM_001080539,NM_024989	chr2,chr2	+,-	CCDC150,PGAP1	-287249,-100
chr10:88514583-88515438	chr10	+	88514805	88515462	True	NM_024756,NM_004329	chr10,chr10	-,+	MMRN2,BMPR1A	202013,933
chr12:54425444-54426481	chr12	+	54425668	54426515	True	NM_004503,NM_018953,NR_030753,NR_026658	chr12,chr12,chr12,chr12	+,+,+,-	HOXC6,HOXC5,MIR615,LOC100240735	-3525,316,1218,49142
chr3:9958772-9959101	chr3	+	9958776	9959064	True	NR_037807,NM_032732,NM_207351,NM_153460,NM_153461,NM_001203263,NM_001203264,NM_001203265	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,-,+,+,+,+,+	IL17RC,IL17RC,PRRT3,IL17RC,IL17RC,IL17RC,IL17RC,IL17RC	-69,-69,35064,-69,-45,-69,-69,-69
chr12:110436923-110437145	chr12	+	110436944	110437126	True	NM_057169,NM_014776,NM_033121,NM_057170,NM_001135213,NM_139201,NM_001135214	chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,-,+,-,-,-,-	GIT2,GIT2,ANKRD13A,GIT2,GIT2,GIT2,GIT2	-2750,-2750,108,-2750,-2750,-2750,-2750
chr12:5420797-5422494	chr12	+	5420875	5422536	True	NM_020373,NM_001102654	chr12,chr12	-,+	ANO2,NTF3	632912,118743
chr22:20847923-20848657	chr22	+	20848533	20848661	True	NM_001003891,NR_033825,NM_032775	chr22,chr22,chr22	+,-,-	MED15,KLHL22,KLHL22	13224,1559,1559
chr6:44241834-44242575	chr6	+	44241950	44242294	True	NM_001137560,NM_004556	chr6,chr6	+,-	TMEM151B,NFKBIE	-3521,-8425
chr19:18061882-18062176	chr19	+	18061953	18062209	True	NM_002248,NM_000215	chr19,chr19	+,-	KCNN1,JAK3	-33,-103112
chr6:165519812-165520266	chr6	+	165519836	165520232	True	NM_144980,NR_027284	chr6,chr6	-,+	C6orf118,LOC441177	202929,880806
chr1:120251878-120252285	chr1	+	120251878	120252043	True	NM_006623,NM_001166107	chr1,chr1	+,-	PHGDH,HMGCS2	2375,59563
chr10:52838669-52839899	chr10	+	52838874	52839733	True	NM_006258,NM_138933	chr10,chr10	+,-	PRKG1,A1CF	-4698,-193439
chr22:19109170-19109396	chr22	+	19109178	19109384	True	NM_053006,NM_005137,NM_001173533,NM_001184781,NM_001173534,NR_033674	chr22,chr22,chr22,chr22,chr22,chr22	+,-,-,-,-,-	TSSK2,DGCR2,DGCR2,DGCR2,DGCR2,DGCR2	8936,633,633,633,633,633
chr1:153629953-153630821	chr1	+	153630282	153630694	True	NM_012437,NM_004515	chr1,chr1	+,-	SNAPIN,ILF2	450,12841
chrY:20928921-20929589	chrY	+	20928923	20929623	True	NM_033108,NR_002159,NM_152584,NR_003509,NM_001001877,NR_003510,NM_153716	chrY,chrY,chrY,chrY,chrY,chrY,chrY	-,+,-,-,-,-,-	HSFY1,TTTY9B,HSFY1,HSFY2,HSFY2,HSFY1,HSFY2	6031,-37208,6028,6048,6028,6028,6048
chrY:20928921-20929589	chrY	-	20714550	20715250	False	NM_033108,NM_152584,NR_003509,NR_001530,NM_001001877,NR_003510,NM_153716	chrY,chrY,chrY,chrY,chrY,chrY,chrY	+,+,+,-,+,+,+	HSFY1,HSFY1,HSFY2,TTTY9A,HSFY2,HSFY1,HSFY2	-6027,-6024,-6044,37209,-6024,-6024,-6044
chr11:119040133-119040827	chr11	+	119040240	119040838	True	NM_001145018,NM_170722,NM_024618	chr11,chr11,chr11	-,+,+	CCDC153,NLRX1,NLRX1	25797,-851,-851
chr19:23857696-23859596	chr19	+	23857821	23859546	True	NM_138330,NR_003662	chr19,chr19	-,+	ZNF675,RPSAP58	10532,86269
chr9:71395299-71395631	chr9	+	71395363	71395609	True	NM_002732,NM_138333	chr9,chr9	-,+	PRKACG,FAM122A	233480,-450
chr18:71960740-71961357	chr18	+	71960840	71961348	True	NM_001914,NM_148923,NM_001190807,NM_001174123	chr18,chr18,chr18,chr18	-,-,-,+	CYB5A,CYB5A,CYB5A,DKFZP781G0119	-1589,-1589,-1589,21761
chr1:48279114-48279409	chr1	+	48279128	48279374	True	NM_001194986,NM_004474	chr1,chr1	-,+	LOC388630,FOXD2	183238,-377490
chr1:246731390-246732944	chr1	+	246731525	246732851	True	NM_152609,NM_001139459,NM_022366	chr1,chr1,chr1	+,+,-	CNST,CNST,TFB2M	-1945,-1945,-1960
chr7:158750665-158751082	chr7	+	158750671	158751073	True	NR_024394,NM_020728	chr7,chr7	+,-	LOC154822,ESYT2	49971,-128352
chr14:50356222-50356764	chr14	+	50356477	50356749	True	NM_004713,NM_001663	chr14,chr14	-,+	NEMF,ARF6	-36938,2986
chr12:9252031-9253892	chr12	+	9252036	9253705	True	NM_000014,NR_026971	chr12,chr12	-,+	A2M,LOC144571	14904,-34314
chr19:47761907-47762605	chr19	+	47762016	47762648	True	NM_015603,NM_001127242	chr19,chr19	+,-	CCDC9,BBC3	-2336,-25993
chr7:139878280-139879299	chr7	+	139878433	139879095	True	NM_030647,NR_024451	chr7,chr7	-,+	JHDM1D,LOC100134229	-1692,-1432
chr6:36409336-36409964	chr6	+	36409410	36409725	True	NM_173562,NM_152990	chr6,chr6	+,-	KCTD20,PXT1	818,997
chr10:8336074-8336414	chr10	+	8336108	8336446	True	NM_002051,NR_024256	chr10,chr10	+,-	GATA3,FLJ45983	-239504,-240661
chr19:54801695-54802190	chr19	+	54801701	54802167	True	NM_001172654,NM_001013,NM_006865	chr19,chr19,chr19	-,+,-	LILRA3,RPS9,LILRA3	2104,-97026,2148
chr16:1538910-1539488	chr16	+	1539087	1539400	True	NM_001013658,NM_016111	chr16,chr16	-,+	PTX4,TELO2	-619,3951
chr19:662038-662406	chr19	+	662165	662343	True	NM_005860,NM_194460	chr19,chr19	+,-	FSTL3,RNF126	14045,940
chr5:76258405-76259281	chr5	+	76258468	76259268	True	NR_003014,NM_001882	chr5,chr5	-,+	SNORA47,CRHBP	117178,-9847
chr22:50050035-50050271	chr22	+	50050166	50050236	True	NR_026997,NM_014838	chr22,chr22	-,+	C22orf34,ZBED4	1004,197260
chr10:29110122-29111815	chr10	+	29110421	29111843	True	NR_033805,NM_012342	chr10,chr10	-,+	LOC220906,BAMBI	-289138,-144048
chr1:145548048-145548740	chr1	+	145548069	145548704	True	NM_144698,NR_002328	chr1,chr1	+,-	ANKRD35,GNRHR2	504,-31993
chr8:60032504-60032830	chr8	+	60032579	60032882	True	NM_005625,NM_014729	chr8,chr8	+,-	SDCBP,TOX	-566902,-812
chr17:4834515-4835147	chr17	+	4834761	4835034	True	NM_000173,NM_001165417,NM_015528,NM_003562,NM_001165418	chr17,chr17,chr17,chr17,chr17	+,-,+,-,-	GP1BA,SLC25A11,RNF167,SLC25A11,SLC25A11	557,8479,8595,8479,8479
chr7:55637717-55638355	chr7	+	55637743	55638326	True	NM_018697,NM_030796	chr7,chr7	+,-	LANCL2,VOPP1	-204653,1931
chrX:132096147-132096399	chrX	+	132096149	132096448	True	NM_001077188,NM_001042452,NM_147175	chrX,chrX,chrX	-,+,-	HS6ST2,MST4,HS6ST2	-726,-938578,-726
chrX:153656285-153656552	chrX	+	153656284	153656532	True	NM_001009934,NM_001493,NM_001183	chrX,chrX,chrX	-,+,+	DNASE1L1,GDI1,ATP6AP1	-15857,8726,445
chr14:94854687-94855093	chr14	+	94854694	94855118	True	NM_001127704,NM_001127705,NM_001127706,NM_001127707,NM_001127700,NM_001127701,NM_001127702,NM_001127703,NM_006215,NM_001002236,NM_001002235,NM_000295	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	-,-,-,-,-,-,-,-,+,-,-,-	SERPINA1,SERPINA1,SERPINA1,SERPINA1,SERPINA1,SERPINA1,SERPINA1,SERPINA1,SERPINA4,SERPINA1,SERPINA1,SERPINA1	1961,1961,1961,1961,1961,1961,1961,1961,172664,1961,1961,85
chr4:175626771-175627235	chr4	+	175626771	175626955	True	NM_001130703,NM_001042543	chr4,chr4	+,-	ADAM29,GLRA3	212553,123572
chr12:13353856-13354614	chr12	+	13353864	13354535	True	NM_001080555,NM_001423	chr12,chr12	-,+	GSG1,EMP1	-97245,-4313
chr20:33103856-33104248	chr20	+	33103999	33104233	True	NM_080476,NM_014183	chr20,chr20	-,+	PIGU,DYNLRB1	160906,8
chr4:10118918-10119607	chr4	+	10118969	10119489	True	NM_005112,NM_017491,NM_000798	chr4,chr4,chr4	-,-,+	WDR1,WDR1,DRD5	-396,-396,-335764
chr1:117213664-117214008	chr1	+	117213929	117214057	True	NR_031564,NM_001007237,NM_001542	chr1,chr1,chr1	+,-,-	MIR320B1,IGSF3,IGSF3	313,-3615,-3615
chr11:64581165-64581653	chr11	+	64581264	64581604	True	NM_006244,NM_130799,NM_000244,NM_130804,NM_130803,NM_130802,NM_130801,NM_130800	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,-,-,-,-,-,-,-	PPP2R5B,MEN1,MEN1,MEN1,MEN1,MEN1,MEN1,MEN1	110538,-3076,-3076,-2498,-2498,-3051,-3229,-3229
chr16:58594427-58595798	chr16	+	58594455	58595769	True	NR_002980,NM_024860	chr16,chr16	-,+	SNORA50,SETD6	-620,-45125
chr22:19511599-19511875	chr22	+	19511635	19511721	True	NM_001130861,NM_003277,NM_003504	chr22,chr22,chr22	-,-,+	CLDN5,CLDN5,CDC45	1189,1189,-44270
chr8:29608750-29609462	chr8	+	29608756	29609132	True	NR_026765,NR_024473	chr8,chr8	-,+	C8orf75,LOC286135	-3131,169896
chr14:81388229-81388453	chr14	+	81388425	81388501	True	NM_152446,NM_001018036	chr14,chr14	-,+	C14orf145,TSHR	17433,33367
chr6:84921691-84923417	chr6	+	84921840	84923433	True	NM_014895,NM_138409	chr6,chr6	-,+	KIAA1009,MRAP2	13959,-178473
chr10:81704382-81704987	chr10	+	81704387	81704907	True	NR_002724,NM_003019	chr10,chr10	+,-	MBL1P,SFTPD	-24504,4004
chr16:72126163-72127161	chr16	+	72126357	72127152	True	NM_001142317,NM_017853,NM_014003,NM_001142318	chr16,chr16,chr16,chr16	-,-,+,-	TXNL4B,TXNL4B,DHX38,TXNL4B	666,437,462,1113
chr2:26860893-26861131	chr2	+	26860996	26861068	True	NM_002246,NM_001029881	chr2,chr2	+,-	KCNK3,CIB4	54512,3193
chr1:203097773-203098042	chr1	+	203097794	203098082	True	NM_001048230,NM_000674,NM_002479	chr1,chr1,chr1	+,+,-	ADORA1,ADORA1,MYOG	-1009,-1009,-42417
chr7:97359827-97360662	chr7	+	97360028	97360706	True	NM_001178077,NM_013997,NM_013996,NM_003182,NM_013998	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	ASNS,TAC1,TAC1,TAC1,TAC1	140827,564,564,564,564
chr9:129378968-129379189	chr9	+	129379030	129379234	True	NM_001174146,NM_001174147,NM_002316,NM_012098	chr9,chr9,chr9,chr9	+,+,+,-	LMX1B,LMX1B,LMX1B,ANGPTL2	-2359,-2359,-2359,505860
chr6:27707763-27708701	chr6	+	27707906	27708591	True	NM_003509,NM_003519	chr6,chr6	+,-	HIST1H2AI,HIST1H2BL	67385,67180
chr1:186348429-186349687	chr1	+	186348597	186349704	True	NM_017847,NM_001164245,NM_001164246,NM_003292	chr1,chr1,chr1,chr1	+,+,+,-	C1orf27,C1orf27,C1orf27,TPR	-3765,-3765,-3765,-4140
chr17:18564561-18565346	chr17	+	18564675	18565184	True	NM_001037330,NR_026718	chr17,chr17	+,-	TRIM16L,FOXO3B	60217,11361
chr17:18564561-18565346	chr17	-	15620957	15621008	False	NM_006470,NM_178571	chr17,chr17	-,+	TRIM16,TBC1D26	-34764,14582
chr11:46871073-46871871	chr11	+	46871077	46871877	True	NM_014756,NM_001003676,NM_001008938	chr11,chr11,chr11	-,+,-	CKAP5,C11orf49,CKAP5	-3234,86373,-3234
chr1:161372891-161374004	chr1	+	161373063	161373901	True	NM_001013625,NM_003001	chr1,chr1	-,+	C1orf192,SDHC	-35399,-88961
chr3:69090019-69091347	chr3	+	69090323	69091103	True	NR_036087,NM_006407	chr3,chr3	-,+	MIR3136,ARL6IP5	7133,42986
chr5:10603219-10604344	chr5	+	10603219	10603809	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-38836,157636
chr6:130547691-130548787	chr6	+	130548110	130548628	True	NM_032438,NM_001017373	chr6,chr6	+,-	L3MBTL3,SAMD3	-208436,-4011
chr5:141393919-141394303	chr5	+	141393919	141394193	True	NM_005471,NM_183401	chr5,chr5	-,+	GNPDA1,RNF14	-1299,-45258
chr11:74302891-74303280	chr11	+	74302998	74303325	True	NM_006591,NM_001144869	chr11,chr11	+,-	POLD3,LIPT2	303,-98243
chr19:29423710-29425347	chr19	+	29423715	29424687	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	31350,279499
chr17:25320588-25321344	chr17	+	25320728	25321279	True	NM_015626,NM_000625	chr17,chr17	+,-	WSB1,NOS2	299826,806328
chr13:41586074-41587441	chr13	+	41586581	41587428	True	NM_007187,NM_172373	chr13,chr13	+,-	WBP4,ELF1	48268,6130
chr12:13027909-13028521	chr12	+	13027924	13028185	True	NM_018654,NR_003932	chr12,chr12	-,+	GPRC5D,RPL13AP20	75184,225
chr9:131183123-131183332	chr9	+	131183216	131183296	True	NR_029837,NM_016174	chr9,chr9	-,+	MIR219-2,CERCAM	-28223,-508
chr2:88376911-88377713	chr2	+	88376933	88377211	True	NM_016618,NM_198274	chr2,chr2	-,+	KRCC1,SMYD1	-21685,-9685
chr2:111118855-111120356	chr2	+	111119140	111120242	True	NR_037626,NR_027244	chr2,chr2	+,-	LOC100507334,LOC151009	-115976,21921
chr2:111118855-111120356	chr2	-	110766302	110767404	False	NR_037627,NR_036225	chr2,chr2	+,-	LOC100288570,MIR4267	-61086,60265
chr20:18269856-18271492	chr20	+	18269908	18271440	True	NM_003434,NM_001083330,NM_001099407	chr20,chr20,chr20	+,+,-	ZNF133,ZNF133,C20orf12	-838,-838,176446
chr13:49820650-49821955	chr13	+	49820958	49821952	True	NM_001193478,NM_030925,NM_030911,NR_036439	chr13,chr13,chr13,chr13	+,-,+,+	CDADC1,CAB39L,CDADC1,CDADC1	94,153833,94,94
chr9:4793701-4793990	chr9	+	4793717	4794015	True	NM_005772,NM_001199853	chr9,chr9	+,-	RCL1,AK3	-934,-51674
chr17:80314449-80314884	chr17	+	80314554	80314932	True	NM_003004,NM_207459	chr17,chr17	-,+	SECTM1,TEX19	-22633,2190
chr1:223888954-223890385	chr1	+	223889052	223890345	True	NM_001143962,NM_001146068,NM_001748	chr1,chr1,chr1	-,+,+	CAPN8,CAPN2,CAPN2	-35616,-86,9773
chr1:183603757-183604132	chr1	+	183603801	183604123	True	NM_015149,NM_005717	chr1,chr1	+,-	RGL1,ARPC5	1084,912
chr15:74752591-74753361	chr15	+	74752639	74753235	True	NM_006465,NM_032907,NM_201265	chr15,chr15,chr15	+,-,-	ARID3B,UBL7,UBL7	80312,331,350
chr3:36970900-36971524	chr3	+	36970924	36971318	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	15280,63522
chr7:144104851-144105166	chr7	+	144104859	144105152	True	NM_005435,NM_001080413	chr7,chr7	+,-	ARHGEF5,NOBOX	-52421,-4073
chr5:151137682-151137997	chr5	+	151137755	151137961	True	NM_005754,NM_004045	chr5,chr5	+,-	G3BP1,ATOX1	13514,299
chr18:43196985-43197502	chr18	+	43197076	43197544	True	NM_007163,NM_020964	chr18,chr18	+,-	SLC14A2,EPG5	-2363,349811
chr6:26248349-26249153	chr6	+	26248410	26249048	True	NM_003547,NM_021018,NM_003540,NM_003524	chr6,chr6,chr6,chr6	-,-,+,+	HIST1H4G,HIST1H3F,HIST1H4F,HIST1H2BH	-1205,1847,-7814,2830
chr17:4473419-4474035	chr17	+	4473424	4473921	True	NM_198501,NM_153338,NM_001122890	chr17,chr17,chr17	+,-,-	SMTNL2,GGT6,GGT6	13354,-9548,-9548
chr11:63305931-63306954	chr11	+	63305933	63306983	True	NM_017878,NM_004585	chr11,chr11	-,+	HRASLS2,RARRES3	23922,-1711
chr15:66678484-66678936	chr15	+	66678668	66678826	True	NM_002755,NM_017858	chr15,chr15	+,-	MAP2K1,TIPIN	384,-29614
chr10:105219588-105220213	chr10	+	105219746	105220144	True	NR_024552,NM_001001412,NM_004210,NM_015916	chr10,chr10,chr10,chr10	-,-,+,-	CALHM2,CALHM1,NEURL,CALHM2	-7584,-1098,33590,-7584
chr3:119297482-119298259	chr3	+	119297635	119298297	True	NM_005191,NM_001125	chr3,chr3	-,+	CD80,ADPRH	-19154,225
chr20:29974091-29974707	chr20	+	29974128	29974526	True	NM_153289,NM_173460,NM_054112,NM_153323	chr20,chr20,chr20,chr20	-,-,+,-	DEFB119,DEFB119,DEFB118,DEFB119	3932,3932,-17758,3932
chr5:98106855-98108698	chr5	+	98107098	98108634	True	NM_001012761,NR_033932	chr5,chr5	+,-	RGMB,FLJ35946	-2150,204
chr11:62439089-62439304	chr11	+	62439089	62439267	True	NM_015853,NR_004390,NM_001043229,NM_001085372,NM_024099	chr11,chr11,chr11,chr11,chr11	-,+,+,+,-	UBXN1,SNORA57,METTL12,C11orf83,C11orf48	7310,-6246,-6361,-14,24
chr22:36901672-36901932	chr22	+	36901827	36901891	True	NM_001102371,NM_024955,NM_145343	chr22,chr22,chr22	-,-,+	FOXRED2,FOXRED2,APOL1	1307,1249,-252761
chr22:46664272-46664672	chr22	+	46664349	46664503	True	NM_006071,NM_017931	chr22,chr22	-,+	PKDREJ,TTC38	-5130,-539
chr6:27800339-27800745	chr6	+	27800495	27800612	True	NM_021968,NM_003510,NM_003520,NM_003541	chr6,chr6,chr6,chr6	+,-,+,-	HIST1H4J,HIST1H2AK,HIST1H2BN,HIST1H4K	-8646,5562,5827,-1190
chr17:2498474-2500277	chr17	+	2498647	2500083	True	NM_000430,NM_024086	chr17,chr17	+,-	PAFAH1B1,METTL16	-1775,-83447
chr17:80476306-80476796	chr17	+	80476329	80476489	True	NR_036519,NM_004514	chr17,chr17	-,+	C17orf62,FOXK2	-67622,1104
chr17:25402088-25403184	chr17	+	25402329	25403227	True	NM_015626,NM_000625	chr17,chr17	+,-	WSB1,NOS2	217878,724378
chr7:127983383-127983759	chr7	+	127983414	127983590	True	NM_000230,NM_001166135,NM_018077	chr7,chr7,chr7	+,-,-	LEP,RBM28,RBM28	-102142,422,422
chr3:11884267-11884930	chr3	+	11884402	11884794	True	NM_138807,NM_003178	chr3,chr3	-,+	C3orf31,SYN2	3608,161067
chr17:42768348-42769820	chr17	+	42768520	42769433	True	NM_001099225,NM_144609,NR_036623	chr17,chr17,chr17	-,-,+	CCDC43,CCDC43,DBF4B	-1355,-1355,16542
chr10:25241837-25242250	chr10	+	25241916	25242270	True	NM_020200,NM_024838	chr10,chr10	-,+	PRTFDC1,THNSL1	-383,63237
chr15:34782770-34784697	chr15	+	34782926	34784746	True	NM_175741,NR_036050	chr15,chr15	+,-	C15orf55,MIR1233-1	-144911,35885
chr2:31777451-31779282	chr2	+	31777554	31779274	True	NM_014600,NM_000348	chr2,chr2	+,-	EHD3,SRD5A2	-320725,26816
chr18:43648561-43650111	chr18	+	43648819	43649859	True	NM_024430,NM_138443	chr18,chr18	-,+	PSTPIP2,HAUS1	2441,34438
chr20:62169367-62169735	chr20	+	62169388	62169776	True	NM_005975,NM_024059,NM_080823	chr20,chr20,chr20	-,+,-	PTK6,C20orf195,SRMS	-681,14596,9131
chr6:94463890-94464878	chr6	+	94464068	94464908	True	NM_004440,NR_015362	chr6,chr6	-,+	EPHA7,TSG1	-334768,-47318
chr18:657467-657752	chr18	+	657467	657783	True	NM_001071,NM_001012716	chr18,chr18	+,-	TYMS,C18orf56	-30,607
chr11:60988609-60988875	chr11	+	60988610	60988824	True	NM_017966,NM_001079808	chr11,chr11	-,+	VPS37C,PGA4	-59694,996
chr11:60988609-60988875	chr11	+	60969865	60969915	False	NM_001079807,NM_017966	chr11,chr11	+,-	PGA3,VPS37C	1068,-40949
chr11:60988609-60988875	chr11	+	61007436	61007650	False	NM_014224,NM_152718	chr11,chr11	+,-	PGA5,VWCE	993,55188
chr2:220174230-220174947	chr2	+	220174234	220174781	True	NM_001199764,NM_001199763,NM_006736,NM_002846	chr2,chr2,chr2,chr2	-,-,+,-	PTPRN,PTPRN,DNAJB2,PTPRN	-505,61,-30245,61
chr1:202168299-202168500	chr1	+	202168438	202168502	True	NR_037664,NM_021636,NM_001017403	chr1,chr1,chr1	-,+,+	PTPN7,LGR6,LGR6	-37722,4402,-5371
chr2:132124746-132126156	chr2	+	132125187	132126072	True	NM_001077637,NR_036499	chr2,chr2	-,+	LOC150786,LOC389043	-3456,34401
chr2:132124746-132126156	chr2	-	131041464	131041514	False	NM_033416,NM_032357	chr2,chr2	+,-	IMP4,CCDC115	58974,58458
chr12:8391289-8392558	chr12	+	8391482	8392410	True	NR_024254,NR_026788	chr12,chr12	-,+	LOC653113,FAM66C	3182,-58730
chr6:27445557-27445841	chr6	+	27445693	27445879	True	NM_001076781,NM_007149	chr6,chr6	+,-	ZNF391,ZNF184	-89229,-4796
chr18:57024515-57025788	chr18	+	57024514	57025807	True	NM_005570,NM_002091	chr18,chr18	-,+	LMAN1,GRP	751,-137173
chr19:53239194-53239762	chr19	+	53239204	53239803	True	NR_023311,NM_001161499,NM_001161500,NM_001161501,NM_030972	chr19,chr19,chr19,chr19,chr19	+,-,-,-,-	ZNF137P,ZNF611,ZNF611,ZNF611,ZNF611	-139318,-897,-897,-907,-6069
chr1:149259666-149261021	chr1	+	149259919	149260999	True	NM_001024599,NR_027002	chr1,chr1	-,+	HIST2H2BF,LOC388692	138280,18476
chr1:149259666-149261021	chr1	+	149645804	149646601	False	NM_001161334,NR_024510	chr1,chr1	-,+	HIST2H2BF,LOC728855	137377,-69411
chr19:54639814-54640325	chr19	+	54639861	54640335	True	NM_014516,NM_013342	chr19,chr19	+,-	CNOT3,TFPT	1100,-20806
chr5:80256522-80256740	chr5	+	80256533	80256735	True	NM_006909,NM_000791	chr5,chr5	+,-	RASGRF2,DHFR	-26,-305733
chr22:20009065-20010209	chr22	+	20009106	20010192	True	NM_152906,NM_001670	chr22,chr22	+,-	C22orf25,ARVCF	-526,-4797
chr1:152390476-152391425	chr1	+	152390631	152391461	True	NM_178438,NM_016190	chr1,chr1	+,-	LCE5A,CRNN	91858,-3881
chr8:21915728-21916103	chr8	+	21915743	21916087	True	NM_001978,NM_024815,NM_001114135,NM_001114137,NM_001114136,NM_001114139,NM_001114138	chr8,chr8,chr8,chr8,chr8,chr8,chr8	+,-,+,+,+,+,+	EPB49,NUDT18,EPB49,EPB49,EPB49,EPB49,EPB49	598,50895,-418,-4713,-3466,-3466,598
chr21:43735012-43735377	chr21	+	43735012	43735323	True	NM_003226,NM_001001895	chr21,chr21	-,+	TFF3,UBASH3A	440,88695
chr16:75654534-75655809	chr16	+	75654567	75655802	True	NR_036460,NM_012091,NM_018975	chr16,chr16,chr16	-,-,+	ADAT1,ADAT1,TERF2IP	1476,1476,25832
chr11:88069629-88070640	chr11	+	88069860	88070689	True	NM_001114173,NM_000372,NM_148170,NM_001814	chr11,chr11,chr11,chr11	-,+,-,-	CTSC,TYR,CTSC,CTSC	302,840350,302,302
chr19:3802461-3803042	chr19	+	3802468	3803056	True	NM_172251,NM_002378	chr19,chr19	+,-	MRPL54,MATK	-39854,-658
chrX:54947820-54948304	chrX	+	54947834	54948346	True	NM_002625,NM_001039705,NM_177556,NM_016157	chrX,chrX,chrX,chrX	-,+,+,+	PFKFB1,TRO,TRO,TRO	72215,-636,-636,-636
chr15:61517810-61518688	chr15	+	61517816	61518724	True	NM_134261,NM_207322	chr15,chr15	-,+	RORA,C2CD4A	2828,840451
chr8:86766715-86767837	chr8	+	86767638	86767718	True	NR_003594	chr8	-	REXO1L2P	8460
chr8:86766715-86767837	chr8	+	86779833	86779913	False	NR_003594,NM_172239	chr8,chr8	-,-	REXO1L2P,REXO1L1	-3705,9443
chr8:86766715-86767837	chr8	+	86795111	86795191	False	NR_003594,NM_172239	chr8,chr8	-,-	REXO1L2P,REXO1L1	-6789,-5805
chr15:65502969-65503827	chr15	+	65503002	65503846	True	NM_001101362,NM_003613	chr15,chr15	+,-	KBTBD13,CILP	-133899,44
chr19:49242913-49243197	chr19	+	49242971	49243237	True	NM_019113,NM_017805,NM_182575	chr19,chr19,chr19	+,-,-	FGF21,RASIP1,IZUMO1	16106,783,6979
chr1:22303221-22303540	chr1	+	22303237	22303559	True	NM_005529,NM_007352	chr1,chr1	-,+	HSPG2,CELA3B	-39487,-10
chr1:22303221-22303540	chr1	+	22327873	22327923	False	NM_005529,NM_005747	chr1,chr1	-,+	HSPG2,CELA3A	-64123,225
chr3:139657256-139658751	chr3	+	139657427	139658655	True	NM_022131,NM_178177	chr3,chr3	+,-	CLSTN2,NMNAT3	-3452,-260542
chr15:34877380-34878875	chr15	+	34877469	34877799	True	NM_175741,NR_027410	chr15,chr15	+,-	C15orf55,GOLGA8B	-239461,-1698
chr1:157071109-157071909	chr1	+	157071125	157071459	True	NM_001004341,NR_001560	chr1,chr1	-,+	ETV3L,CYCSP52	-1525,26694
chr9:34122006-34122565	chr9	+	34122049	34122461	True	NM_015397,NM_001171201	chr9,chr9	-,+	DCAF12,UBAP1	4368,56541
chr6:170095742-170095986	chr6	+	170095800	170095965	True	NM_182552,NM_001202550,NM_001029863	chr6,chr6,chr6	-,-,+	WDR27,WDR27,C6orf120	6251,6251,6291
chr19:16058621-16060521	chr19	+	16058863	16060544	True	NM_001004465,NM_021187	chr19,chr19	+,-	OR10H4,CYP4F11	-39,-13187
chr7:156685134-156685497	chr7	+	156685134	156685534	True	NM_022458,NM_138400	chr7,chr7	-,+	LMBR1,NOM1	418,56882
chrX:11306363-11308027	chrX	+	11306482	11307778	True	NM_182680,NM_182681,NM_001142,NM_013423	chrX,chrX,chrX,chrX	+,+,+,-	AMELX,AMELX,AMELX,ARHGAP6	3754,3754,3754,-22387
chr8:133655404-133656707	chr8	+	133655543	133656521	True	NM_012472,NM_198513	chr8,chr8	-,+	LRRC6,PHF20L1	31344,131082
chr12:131671471-131672794	chr12	+	131671522	131672764	True	NR_026670,NM_194356	chr12,chr12	+,-	LOC116437,STX2	-22024,-347711
chr17:45282521-45283594	chr17	+	45282656	45283594	True	NM_002476,NM_001002841,NM_001256	chr17,chr17,chr17	+,+,-	MYL4,MYL4,CDC27	3119,2833,-15991
chr4:186461120-186461550	chr4	+	186461173	186461535	True	NM_001114357,NM_001114107,NM_014476	chr4,chr4,chr4	+,-,-	C4orf47,PDLIM3,PDLIM3	-110692,-4461,-4461
chr4:72631904-72633478	chr4	+	72632096	72633514	True	NM_004885,NM_000583	chr4,chr4	+,-	NPFFR2,GC	264006,16620
chr19:56136080-56136350	chr19	+	56136115	56136355	True	NM_001195605,NM_203374	chr19,chr19	+,-	ZNF865,ZNF784	-11207,-174
chr1:118708559-118708809	chr1	+	118708558	118708850	True	NM_006784,NM_206996	chr1,chr1	+,-	WDR3,SPAG17	-236243,19057
chr6:26086015-26086449	chr6	+	26086138	26086472	True	NM_139008,NM_139009,NM_005323,NM_000410,NM_139003,NM_139004,NM_139006,NM_139007,NM_139011,NM_139010	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	+,+,-,+,+,+,+,+,+,+	HFE,HFE,HIST1H1T,HFE,HFE,HFE,HFE,HFE,HFE,HFE	1036,1036,21942,1036,1036,1036,1036,1036,1036,1036
chr12:110886581-110887257	chr12	+	110886878	110887076	True	NM_005719,NM_013300	chr12,chr12	-,+	ARPC3,C12orf24	1136,19155
chr2:238599698-238599987	chr2	+	238599713	238599961	True	NM_001137551,NM_001137552,NM_001137553,NM_004735,NR_033308	chr2,chr2,chr2,chr2,chr2	+,+,+,+,-	LRRFIP1,LRRFIP1,LRRFIP1,LRRFIP1,RAB17	845,845,845,845,-99944
chr16:22823813-22824646	chr16	+	22823910	22824563	True	NR_037517,NM_006043	chr16,chr16	-,+	MIR548AA2,HS3ST2	-20547,1296
chr6:37214723-37215254	chr6	+	37214767	37215019	True	NM_145316,NM_017772	chr6,chr6	-,+	TMEM217,TBC1D22B	10452,10528
chr4:103746736-103746973	chr4	+	103746856	103747018	True	NM_001008388,NM_003340,NM_181887,NM_181891,NM_181892,NM_181889,NM_181888,NM_181886	chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4	+,-,-,-,-,-,-,-	CISD2,UBE2D3,UBE2D3,UBE2D3,UBE2D3,UBE2D3,UBE2D3,UBE2D3	43116,2137,1740,1740,1372,2339,2137,2137
chr7:64733670-64734091	chr7	+	64733843	64734038	True	NM_001007253,NM_007139	chr7,chr7	-,+	ERV3,ZNF92	-266719,104729
chr8:82648175-82649639	chr8	+	82648768	82649606	True	NR_033196,NM_152284	chr8,chr8	-,+	ZFAND1,CHMP4C	-15229,-4141
chr5:113697726-113698007	chr5	+	113697764	113697844	True	NM_018700,NM_021614	chr5,chr5	-,+	TRIM36,KCNN2	818449,171
chr9:92218494-92218702	chr9	+	92218626	92218690	True	NM_006705,NM_006378	chr9,chr9	+,-	GADD45G,SEMA4D	1236,-124015
chr9:131844329-131845810	chr9	+	131844331	131845643	True	NM_000755,NM_020438,NM_001135917	chr9,chr9,chr9	-,+,+	CRAT,DOLPP1,DOLPP1	27477,-1000,-1000
chr10:103893587-103893811	chr10	+	103893594	103893818	True	NM_001113407,NM_015062	chr10,chr10	-,+	LDB1,PPRC1	-13384,-858
chr6:2752914-2753281	chr6	+	2752925	2753320	True	NM_001012418,NM_020135	chr6,chr6	-,+	MYLK4,WRNIP1	-1771,12345
chr14:77965301-77965507	chr14	+	77965301	77965530	True	NM_182509,NM_012111,NM_199296	chr14,chr14,chr14	-,+,-	ISM2,AHSA1,ISM2	-91,-40979,-91
chr7:98922179-98923424	chr7	+	98922259	98923405	True	NM_014891,NM_006409,NM_001190996	chr7,chr7,chr7	-,+,+	PDAP1,ARPC1A,ARPC1A	82950,90,90
chr1:27952558-27953218	chr1	+	27952635	27953055	True	NM_001042747,NM_001042729,NM_005248,NM_001143912	chr1,chr1,chr1,chr1	-,-,-,+	FGR,FGR,FGR,FAM76A	4,101,8722,99434
chr17:42977199-42977587	chr17	+	42977406	42977508	True	NM_001142605,NM_213607,NM_004247	chr17,chr17,chr17	-,+,-	EFTUD2,CCDC103,EFTUD2	-413,-303,-413
chr9:37802908-37804493	chr9	+	37802920	37804426	True	NM_001002269,NM_024345	chr9,chr9	-,+	EXOSC3,DCAF10	-17853,-2181
chr11:117667126-117667398	chr11	+	117667153	117667379	True	NM_020693,NM_001558	chr11,chr11	-,+	DSCAML1,IL10RA	647,189726
chr3:10152166-10152929	chr3	+	10152326	10152680	True	NM_173472,NM_018462,NM_001164839	chr3,chr3,chr3	-,+,-	C3orf24,C3orf10,C3orf24	-2411,4652,-2411
chr11:120080565-120081035	chr11	+	120080625	120081051	True	NM_012101,NM_178507	chr11,chr11	-,+	TRIM29,OAF	-71762,695
chr1:150039118-150039347	chr1	+	150039313	150039395	True	NM_007259,NM_020205	chr1,chr1	+,-	VPS45,OTUD7B	-22,-56627
chr5:81281672-81282808	chr5	+	81282125	81282566	True	NM_031482,NM_012446	chr5,chr5	+,-	ATG10,SSBP2	-14332,-235053
chr19:54785092-54785657	chr19	+	54785153	54785541	True	NM_001013,NM_005874,NM_001080978	chr19,chr19,chr19	+,-,-	RPS9,LILRB2,LILRB2	-80485,-120,-120
chr5:112255838-112256769	chr5	+	112255938	112256709	True	NM_005669,NM_152624	chr5,chr5	-,+	REEP5,DCP2	1378,55723
chr19:15621868-15622699	chr19	+	15622436	15622680	True	NM_173483,NM_052890	chr19,chr19	+,-	CYP4F22,PGLYRP2	-3151,-32121
chr15:77362147-77362378	chr15	+	77362146	77362400	True	NM_003978,NM_005724,NM_198902,NM_001168412	chr15,chr15,chr15,chr15	+,-,-,-	PSTPIP1,TSPAN3,TSPAN3,TSPAN3	-74732,1222,1222,1222
chr14:50161494-50162502	chr14	+	50161664	50162415	True	NM_172193,NM_001197330,NM_001197331,NM_002692	chr14,chr14,chr14,chr14	+,-,-,-	KLHDC1,POLE2,POLE2,POLE2	-1892,-6566,-6566,-6566
chr13:49702108-49702599	chr13	+	49702367	49702637	True	NM_014923,NM_030925	chr13,chr13	+,-	FNDC3A,CAB39L	-17969,273148
chr11:68450041-68450277	chr11	+	68450049	68450325	True	NM_015973,NM_004923	chr11,chr11	+,-	GAL,MTL5	1657,68713
chr18:54337832-54338795	chr18	+	54338061	54338505	True	NM_052834,NR_024546	chr18,chr18	+,-	WDR7,TXNL1	-19509,-32141
chr20:29953879-29954132	chr20	+	29953907	29953997	True	NM_153289,NM_054112	chr20,chr20	-,+	DEFB119,DEFB118	24459,2423
chr1:92952560-92954084	chr1	+	92952643	92953802	True	NM_001127216,NM_001127215,NM_024813,NM_005263	chr1,chr1,chr1,chr1	-,-,+,-	GFI1,GFI1,RPAP2,GFI1	-1015,-3287,-188173,-210
chr16:66784139-66785039	chr16	+	66784172	66784940	True	NM_005182,NM_006141	chr16,chr16	+,-	CA7,DYNC1LI2	93341,635
chr6:144006682-144006988	chr6	+	144006715	144006997	True	NM_001100165,NM_001100164,NR_027113	chr6,chr6,chr6	+,+,-	PHACTR2,PHACTR2,LOC285740	-7669,-7669,-116239
chr9:132804439-132804655	chr9	+	132804526	132804690	True	NM_001136557,NM_015033	chr9,chr9	+,-	GPR107,FNBP1	11294,833
chr12:11324523-11324965	chr12	+	11324523	11325002	True	NR_036583,NR_037918	chr12,chr12	+,-	LOC100129361,PRH1-PRR4	-795,-299
chr5:43511605-43512975	chr5	+	43512148	43512822	True	NM_198566,NM_012343	chr5,chr5	-,+	C5orf34,NNT	2507,89968
chr11:96064836-96065873	chr11	+	96065297	96065891	True	NR_036125,NM_032427	chr11,chr11	+,-	MIR1260B,MAML2	8710,10503
chr1:36403878-36405826	chr1	+	36403984	36405469	True	NM_024852,NM_005202,NM_177422	chr1,chr1,chr1	+,-,+	EIF2C3,COL8A2,EIF2C3	-7361,160431,-7361
chr10:11206754-11207219	chr10	+	11206819	11207151	True	NM_001083591,NR_024411,NM_001025076	chr10,chr10,chr10	+,-,+	CELF2,LOC254312,CELF2	57,-212693,57
chr21:35009271-35009605	chr21	+	35009325	35009482	True	NM_145858,NM_003024,NM_001001132	chr21,chr21,chr21	-,+,+	CRYZL1,ITSN1,ITSN1	4729,5301,5301
chr2:91750242-91750509	chr2	+	91750497	91750557	True	NR_003503,NR_027238	chr2,chr2	+,-	GGT8P,LOC654342	212810,97468
chr2:91750242-91750509	chr2	-	87576411	87576471	False	NR_026846,NR_024204	chr2,chr2	-,+	LOC285074,NCRNA00152	-272875,178502
chr10:99391630-99392267	chr10	+	99391750	99391957	True	NM_018425,NM_178832,NM_001098831	chr10,chr10,chr10	+,-,-	PI4K2A,MORN4,MORN4	8485,1442,2011
chr1:116197848-116198060	chr1	+	116197886	116198058	True	NM_001232,NM_001172412	chr1,chr1	-,+	CASQ2,VANGL1	113418,-12695
chr16:79707567-79708714	chr16	+	79707603	79708704	True	NM_005360,NM_130897	chr16,chr16	-,+	MAF,DYNLRB2	-72981,866149
chr2:197406910-197408908	chr2	+	197407292	197408937	True	NM_020760,NM_001080539	chr2,chr2	-,+	HECW2,CCDC150	48448,95418
chr3:155588905-155589111	chr3	+	155588980	155589048	True	NM_003875,NM_004733	chr3,chr3	+,-	GMPS,SLC33A1	-706,-16732
chr19:53394123-53395542	chr19	+	53394621	53395341	True	NM_152473,NM_207333	chr19,chr19	+,-	HERV-V1,ZNF320	122002,-22
chr6:26218277-26218628	chr6	+	26218449	26218509	True	NM_003532,NM_003518,NM_021052	chr6,chr6,chr6	+,-,+	HIST1H3E,HIST1H2BG,HIST1H2AE	6873,-1577,-1352
chr8:6264667-6264957	chr8	+	6264743	6265001	True	NM_001172575,NM_001172574,NM_001118887,NM_024596	chr8,chr8,chr8,chr8	+,+,-,+	MCPH1,MCPH1,ANGPT2,MCPH1	-688,-688,155833,-688
chr1:202094147-202095008	chr1	+	202094328	202094772	True	NM_004767,NM_138795	chr1,chr1	+,-	GPR37L1,ARL8A	-2350,19144
chr2:11681040-11681403	chr2	+	11681058	11681386	True	NR_003095,NM_148903,NM_033090,NM_014668	chr2,chr2,chr2,chr2	-,+,+,+	E2F6,GREB1,GREB1,GREB1	-74761,-1037,1464,-6875
chr12:69005194-69005671	chr12	+	69005245	69005698	True	NM_015646,NM_001010942,NR_033335	chr12,chr12,chr12	+,+,-	RAP1B,RAP1B,SNORA70G	-644,-644,15509
chr11:6221157-6222711	chr11	+	6221395	6222600	True	NM_001005178,NM_173525,NM_001004052	chr11,chr11,chr11	+,+,-	OR52W1,C11orf42,OR52B2	-993,4197,-29839
chr1:25573723-25573932	chr1	+	25573786	25573980	True	NM_001127691,NM_020317	chr1,chr1	+,-	RHD,C1orf63	25000,55
chr11:126224223-126224762	chr11	+	126224341	126224683	True	NM_006278,NR_033839	chr11,chr11	+,-	ST3GAL4,FLJ39051	1412,849
chr18:14745700-14747034	chr18	+	14746412	14746539	True	NM_001145029,NM_001137671	chr18,chr18	+,-	ANKRD30B,POTEC	1699,-202813
chr8:90767526-90768560	chr8	+	90767551	90768541	True	NM_002485,NM_003821	chr8,chr8	-,+	NBN,RIPK2	228417,1433
chr5:145472392-145473767	chr5	+	145472522	145473485	True	NM_018989,NM_001029869	chr5,chr5	+,-	RBM27,PLAC8L1	109677,10511
chr11:5142740-5143020	chr11	+	5142761	5143060	True	NM_001001916,NM_001005222	chr11,chr11	+,-	OR52J3,OR52A4	-75056,-26
chr17:30348581-30348865	chr17	+	30348619	30348885	True	NM_018428,NM_052888	chr17,chr17	-,+	UTP6,LRRC37B	-119890,-515
chr9:134405435-134406091	chr9	+	134405435	134406005	True	NM_001135954,NM_007171,NM_031432	chr9,chr9,chr9	-,+,-	UCK1,POMT1,UCK1	707,-27197,707
chr11:35160309-35160569	chr11	+	35160314	35160618	True	NM_001001390,NM_001001391,NM_001001392,NM_000610,NM_001202555,NM_001202557,NM_001202556,NM_015957,NM_001001389	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,+,+,-,+	CD44,CD44,CD44,CD44,CD44,CD44,CD44,APIP,CD44	16,16,16,16,16,16,16,-222375,16
chr3:49138862-49139288	chr3	+	49138903	49139287	True	NM_173546,NM_005051,NM_017730,NM_198880	chr3,chr3,chr3,chr3	+,-,-,-	KLHDC8B,QARS,QRICH1,QRICH1	69730,2934,-7399,-7399
chr12:54475570-54476345	chr12	+	54475687	54476278	True	NR_026657,NR_026658	chr12,chr12	+,-	LOC100240734,LOC100240735	19714,-80
chr6:42017763-42018009	chr6	+	42017805	42017921	True	NM_138572,NM_001136126,NM_001136017	chr6,chr6,chr6	+,-,-	TAF8,CCND3,CCND3	329,-1195,-1195
chr6:123103045-123103514	chr6	+	123103319	123103561	True	NM_006714,NM_001446,NM_020755	chr6,chr6,chr6	+,+,-	SMPDL3A,FABP7,SERINC1	6409,-2731,-310367
chr1:169555698-169555969	chr1	+	169555850	169555996	True	NM_018186,NM_000130	chr1,chr1	+,-	C1orf112,F5	208553,-81
chr8:27936912-27937617	chr8	+	27937128	27937414	True	NM_018091,NM_001010906	chr8,chr8	+,-	ELP3,C8orf80	13169,4026
chr11:66248236-66248883	chr11	+	66248435	66248671	True	NM_170739,NM_130443,NM_005700	chr11,chr11,chr11	-,+,+	MRPL11,DPP3,DPP3	-42125,-606,-606
chr8:145753546-145753756	chr8	+	145753566	145753750	True	NM_001001795,NM_001024678,NM_014665	chr8,chr8,chr8	-,-,+	C8orf82,LRRC24,LRRC14	758,-1150,-10254
chr3:112357651-112358622	chr3	+	112357752	112358636	True	NM_017945,NM_199511,NM_199512	chr3,chr3,chr3	+,-,-	SLC35A5,CCDC80,CCDC80	-76908,1391,1391
chr11:36395936-36396157	chr11	+	36396041	36396185	True	NM_024841,NM_001160168,NM_014186	chr11,chr11,chr11	+,+,-	PRR5L,PRR5L,COMMD9	1349,1349,-85042
chr15:75014046-75014823	chr15	+	75014114	75014822	True	NM_000499,NM_000761	chr15,chr15	-,+	CYP1A1,CYP1A2	3105,26361
chr9:130517840-130518342	chr9	+	130517878	130518303	True	NM_001142532,NM_001142533,NM_001142531,NM_001142534,NR_036055	chr9,chr9,chr9,chr9,chr9	-,-,-,-,+	SH2D3C,SH2D3C,SH2D3C,SH2D3C,MIR2861	6451,-295,6473,-317,29893
chr8:101729530-101731512	chr8	+	101730080	101731467	True	NR_033962,NM_002568	chr8,chr8	+,-	FLJ42969,PABPC1	332814,2898
chr16:22013690-22015083	chr16	+	22013770	22014709	True	NM_173806,NR_033694,NM_001164579	chr16,chr16,chr16	-,-,+	PDZD9,PDZD9,C16orf52	-1339,-1339,4746
chr22:39410191-39410640	chr22	+	39410252	39410680	True	NM_014508,NM_175709,NM_152426	chr22,chr22,chr22	+,-,+	APOBEC3C,CBX7,APOBEC3D	-38,137908,6437
chr1:160538951-160539288	chr1	+	160538985	160539274	True	NM_001184879,NM_020335	chr1,chr1	-,+	CD84,VANGL2	10083,-168672
chr13:53226521-53226835	chr13	+	53226525	53226735	True	NM_006704,NM_001011705,NM_001130912	chr13,chr13,chr13	+,-,+	SUGT1,LECT1,SUGT1	95,87262,95
chrX:27840417-27841054	chrX	+	27840421	27840860	True	NM_182506,NM_001017930	chrX,chrX	+,-	MAGEB10,DCAF8L1	-14365,158757
chr15:41053823-41054574	chr15	+	41053822	41054411	True	NM_018145,NM_001130448,NM_005258	chr15,chr15,chr15	-,+,+	FAM82A2,C15orf62,GCHFR	-6364,7747,1873
chr4:54905860-54906759	chr4	+	54905908	54906340	True	NM_133267,NM_012110	chr4,chr4	+,-	GSX2,CHIC2	59907,24506
chr3:45428497-45429481	chr3	+	45428883	45429500	True	NM_015444,NM_015340	chr3,chr3	-,+	TMEM158,LARS2	-161069,574
chr15:41789584-41790006	chr15	+	41789763	41789927	True	NM_002220,NM_001135685	chr15,chr15	+,-	ITPKA,LTK	-3692,16208
chr8:10383648-10384857	chr8	+	10384036	10384766	True	NM_001197020,NM_178857,NM_198464	chr8,chr8,chr8	+,-,+	PRSS55,RP1L1,PRSS55	-1031,127901,-1031
chr15:81582633-81583136	chr15	+	81582740	81583184	True	NM_004513,NM_181900	chr15,chr15	+,-	IL16,STARD5	6069,33390
chr14:52779665-52780727	chr14	+	52779665	52780581	True	NM_000956,NM_001160047	chr14,chr14	+,-	PTGER2,TXNDC16	434,238770
chr6:26598180-26598949	chr6	+	26598189	26598969	True	NM_013375,NM_024639	chr6,chr6	+,-	ABT1,ZNF322A	-1060,61044
chr16:3661739-3661957	chr16	+	3661759	3661861	True	NM_005223,NM_032444	chr16,chr16	+,-	DNASE1,SLX4	41078,-174
chr17:77004871-77005680	chr17	+	77004914	77005106	True	NM_001159772,NM_001159773,NM_138793,NM_030968	chr17,chr17,chr17,chr17	-,-,-,+	CANT1,CANT1,CANT1,C1QTNF1	843,843,843,15144
chr19:3571375-3571816	chr19	+	3571391	3571713	True	NM_174983,NM_006339	chr19,chr19	-,+	C19orf28,HMG20B	-13820,1229
chr8:143279932-143280526	chr8	+	143280093	143280547	True	NM_145003,NR_024378	chr8,chr8	-,+	TSNARE1,NCRNA00051	204046,-427
chr19:47974597-47975161	chr19	+	47974622	47975122	True	NM_014681,NM_015063	chr19,chr19	+,-	DHX34,SLC8A2	-122135,235
chrX:147583014-147583218	chrX	+	147583013	147583231	True	NM_002025,NR_024503,NM_001169124,NM_001169125,NM_001169122,NM_001169123	chrX,chrX,chrX,chrX,chrX,chrX	+,-,+,+,+,+	AFF2,FMR1-AS1,AFF2,AFF2,AFF2,AFF2	-925,-579337,-925,-925,-925,-925
chrX:53106892-53108358	chrX	+	53107265	53108051	True	NM_022117,NM_014138	chrX,chrX	+,-	TSPYL2,FAM156A	3490,-121089
chr19:37204775-37206221	chr19	+	37204887	37205997	True	NM_152603,NM_153257	chr19,chr19	+,-	ZNF567,ZNF461	-24646,-47148
chr1:203464616-203465809	chr1	+	203464690	203465852	True	NM_002023,NM_014359	chr1,chr1	-,+	FMOD,OPTC	-144401,-1470
chr3:141941858-141942400	chr3	+	141941903	141942398	True	NM_001679,NM_001039547,NR_033289	chr3,chr3,chr3	+,-,-	ATP1B3,GK5,GK5	-346492,2101,2101
chr2:234214630-234215944	chr2	+	234214640	234215502	True	NM_000541,NM_018218	chr2,chr2	+,-	SAG,USP40	806,258784
chr6:25290482-25291020	chr6	+	25290634	25290887	True	NM_017640,NR_027626	chr6,chr6	+,-	LRRC16A,CMAH	-11029,-152014
chr1:1623172-1623664	chr1	+	1623328	1623699	True	NR_002946,NM_001110781	chr1,chr1	+,-	MMP23A,SLC35E2B	7678,594
chr1:1623172-1623664	chr1	+	1676603	1676974	False	NM_182838,NM_001199787,NR_002946	chr1,chr1,chr1	-,-,+	SLC35E2,SLC35E2,MMP23A	514,514,-45276
chr8:11627755-11628179	chr8	+	11627816	11628150	True	NM_001135747,NM_001135746,NM_145043,NM_001908,NM_001135748	chr8,chr8,chr8,chr8,chr8	+,+,+,-,+	NEIL2,NEIL2,NEIL2,CTSB,NEIL2	-695,-695,-695,97554,-695
chr2:234462817-234463128	chr2	+	234462912	234463172	True	NM_019076,NM_018218	chr2,chr2	+,-	UGT1A8,USP40	63118,11122
chr19:18209142-18209407	chr19	+	18209152	18209353	True	NM_015016,NM_153701	chr19,chr19	+,-	MAST3,IL12RB1	-600,-11455
chr16:229106-229405	chr16	+	229349	229436	True	NM_001077350,NM_000558,NM_000517,NM_005331	chr16,chr16,chr16,chr16	-,+,+,+	NPRL3,HBA1,HBA2,HBQ1	-40677,-2729,-6562,896
chr15:65424009-65424881	chr15	+	65424141	65424930	True	NM_005707,NM_001101362	chr15,chr15	-,+	PDCD7,KBTBD13	1294,-55038
chr19:55952082-55952771	chr19	+	55952191	55952613	True	NM_033113,NM_001145176	chr19,chr19	+,-	ZNF628,SHISA7	35085,1667
chr20:57413692-57414659	chr20	+	57414061	57414431	True	NM_016592,NR_002785	chr20,chr20	+,-	GNAS,GNAS-AS1	363,11577
chr2:27601086-27601343	chr2	+	27601092	27601338	True	NM_001201459,NM_001034116,NM_014748,NM_015636,NM_144631,NM_172195	chr2,chr2,chr2,chr2,chr2,chr2	-,-,+,-,-,-	ZNF513,EIF2B4,SNX17,EIF2B4,ZNF513,EIF2B4	2023,-7768,-7754,-7768,2323,-8173
chr5:94956012-94956370	chr5	+	94956130	94956272	True	NM_031952,NM_199243	chr5,chr5	-,+	SPATA9,GPR150	62492,-201
chr11:124613674-124615416	chr11	+	124613697	124615463	True	NM_001126181,NM_006176,NM_014312	chr11,chr11,chr11	+,+,-	NRGN,NRGN,VSIG2	-3928,-3928,6696
chr2:95941899-95942143	chr2	+	95941954	95942192	True	NM_001165978,NM_144707,NM_032788,NM_001165977	chr2,chr2,chr2,chr2	+,+,-,+	PROM2,PROM2,ZNF514,PROM2	-1804,-1804,-116691,-1804
chr17:28883556-28884064	chr17	+	28883654	28884006	True	NM_206832,NM_015594	chr17,chr17	-,+	TMIGD1,TBC1D29	-222589,2577
chr22:50313355-50314021	chr22	+	50313408	50313914	True	NM_024324,NM_024105,NM_001135101	chr22,chr22,chr22	+,-,+	CRELD2,ALG12,CRELD2	-1176,-1302,-1176
chr21:37538589-37540021	chr21	+	37538892	37539943	True	NM_017438,NM_005128	chr21,chr21	-,+	SETD4,DOPEY2	-106076,-2106
chrY:23758319-23758773	chrY	+	23758516	23758630	True	NM_001006120,NR_001537	chrY,chrY	+,-	RBMY1D,TTTY13	-61762,-1964
chr7:23529548-23530098	chr7	+	23529775	23530041	True	NM_006547,NR_026676	chr7,chr7	-,+	IGF2BP3,RPS2P32	-19780,-20
chr14:22000157-22001019	chr14	+	22000157	22000457	True	NM_005407,NM_014828	chr14,chr14	-,+	SALL2,TOX4	4930,-54877
chrX:118978104-118978725	chrX	+	118978309	118978553	True	NM_004541,NM_080632,NM_023010	chrX,chrX,chrX	+,-,-	NDUFA1,UPF3B,UPF3B	27180,8492,8492
chr19:17531472-17532084	chr19	+	17531626	17531862	True	NM_004335,NM_138401	chr19,chr19	-,+	BST2,FAM125A	-15242,-765
chr17:78314202-78314695	chr17	+	78314261	78314349	True	NR_029376,NM_001164638	chr17,chr17	-,+	LOC100294362,FLJ35220	74669,74617
chr8:42243637-42244966	chr8	+	42243887	42244855	True	NM_014420,NM_001135694,NM_005662	chr8,chr8,chr8	-,+,+	DKK4,VDAC3,VDAC3	-9213,4490,4490
chr2:241524934-241525368	chr2	+	241524939	241525366	True	NM_017844,NM_023083,NM_023085	chr2,chr2,chr2	-,+,+	ANKMY1,CAPN10,CAPN10	-27534,766,766
chr8:37704685-37705513	chr8	+	37704756	37705447	True	NM_018310,NM_032777	chr8,chr8	-,+	BRF2,GPR124	2039,-50420
chr19:29458006-29458225	chr19	+	29458005	29458188	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	-2018,245999
chr2:73302858-73303550	chr2	+	73302971	73303583	True	NM_144579,NM_001134462	chr2,chr2	-,+	SFXN5,NOTO	-4006,125802
chr2:74180232-74180936	chr2	+	74180234	74180820	True	NM_080918,NM_003584	chr2,chr2	+,-	DGUOK,DUSP11	-26332,-172950
chr16:56689195-56690663	chr16	+	56689199	56690065	True	NM_005947,NM_005949,NM_005950	chr16,chr16,chr16	+,+,-	MT1B,MT1F,MT1G	-3439,1789,11962
chr7:92464684-92465034	chr7	+	92464724	92464992	True	NM_001259,NR_026902,NM_001145306	chr7,chr7,chr7	-,+,-	CDK6,MGC16142,CDK6	-1493,-296986,999
chr2:9139278-9139552	chr2	+	9139375	9139604	True	NM_001135191,NM_138799	chr2,chr2	+,-	ASAP2,MBOAT2	207289,4329
chr8:143852083-143852501	chr8	+	143852147	143852539	True	NM_177477,NM_177476,NM_177457,NM_177458,NM_016647,NM_023946	chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,+,-	LYNX1,LYNX1,LYNX1,LYNX1,C8orf55,LYNX1	6255,5948,7151,-901,-43577,7150
chr12:122691247-122691787	chr12	+	122691309	122691689	True	NM_030765,NM_019887	chr12,chr12	+,-	B3GNT4,DIABLO	-3132,20429
chr1:86045497-86045910	chr1	+	86045730	86045822	True	NM_001554,NM_001134445	chr1,chr1	+,-	CYR61,DDAH1	621,-1684
chr6:53882291-53883977	chr6	+	53882301	53883978	True	NM_138569,NM_001003760	chr6,chr6	+,-	C6orf142,KLHL31	-4,-351795
chr3:113231414-113233338	chr3	+	113231572	113233280	True	NM_144718,NM_017699	chr3,chr3	-,+	SPICE1,SIDT1	805,17937
chr19:36629067-36630142	chr19	+	36629638	36629698	True	NM_001003962,NM_001864,NM_001749	chr19,chr19,chr19	+,-,+	CAPNS1,COX7A1,CAPNS1	1219,14123,1219
chr22:44352959-44354449	chr22	+	44353056	44354319	True	NM_138814,NM_015380	chr22,chr22	-,+	PNPLA5,SAMM50	-65163,-1846
chr2:9562565-9563053	chr2	+	9562575	9563003	True	NM_022334,NM_004763,NM_016207	chr2,chr2,chr2	-,-,+	ITGB1BP1,ITGB1BP1,CPSF3	690,690,864
chr12:115120460-115120781	chr12	+	115120499	115120697	True	NM_138432,NM_016569,NM_005996	chr12,chr12,chr12	+,-,-	SDSL,TBX3,TBX3	-1260334,1322,1322
chr18:74967074-74968681	chr18	+	74967334	74968607	True	NM_001480,NM_001025100	chr18,chr18	+,-	GALR1,MBP	-5385,-122560
chr4:164246586-164248451	chr4	+	164246699	164248335	True	NM_006174,NM_000909	chr4,chr4	+,-	NPY5R,NPY1R	16755,5670
chr5:173113472-173114709	chr5	+	173113688	173114694	True	NR_027109,NM_138369	chr5,chr5	+,-	LOC285593,BOD1	-107082,-70022
chr13:20440216-20440526	chr13	+	20440417	20440514	True	NM_001142684,NM_001039649,NM_003453,NM_001039650	chr13,chr13,chr13,chr13	-,-,+,-	ZMYM5,ZMYM5,ZMYM2,ZMYM5	-2641,-2641,92295,-2641
chr16:8766283-8767916	chr16	+	8766914	8767822	True	NM_020686,NM_015421	chr16,chr16	+,-	ABAT,TMEM186	621,123733
chr8:82598667-82599102	chr8	+	82598685	82598954	True	NM_152284,NM_005536,NM_001144879,NM_001144878,NM_001010893	chr8,chr8,chr8,chr8,chr8	+,-,-,-,-	CHMP4C,IMPA1,IMPA1,IMPA1,SLC10A5	45733,-96,-96,-96,8310
chr6:14742581-14743055	chr6	+	14742601	14743089	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	503437,920250
chr19:18450037-18450866	chr19	+	18450568	18450740	True	NM_017712,NM_012321	chr19,chr19	+,-	PGPEP1,LSM4	667,-16567
chr7:33085362-33086506	chr7	+	33085477	33086421	True	NM_016489,NM_001166118,NM_001033604	chr7,chr7,chr7	-,-,+	NT5C3,NT5C3,BBS9	-4955,-4956,82730
chr1:896696-897146	chr1	+	896760	897126	True	NM_015658,NM_198317,NM_001160184,NM_032129	chr1,chr1,chr1,chr1	-,+,+,+	NOC2L,KLHL17,PLEKHN1,PLEKHN1	-2081,-844,4750,4750
chr3:94226490-94228143	chr3	+	94226521	94228057	True	NR_015400,NM_001195643	chr3,chr3	+,-	LOC255025,DHFRL1	429049,-444454
chr11:9627060-9627399	chr11	+	9627061	9627435	True	NR_036539,NM_001143976	chr11,chr11	-,+	LOC644656,WEE1	-144816,-30878
chr5:22791283-22792491	chr5	+	22791307	22792539	True	NR_003921,NM_004061	chr5,chr5	+,-	PMCHL1,CDH12	-648904,61242
chr22:50682255-50682798	chr22	+	50682255	50682791	True	NM_032019,NM_031454,NM_001159286,NM_020461	chr22,chr22,chr22,chr22	-,+,-,-	HDAC10,SELO,HDAC10,TUBGCP6	7093,-42898,7093,659
chr6:36239090-36239753	chr6	+	36239270	36239770	True	NM_001145717,NM_001010903	chr6,chr6	+,-	PNPLA1,C6orf222	-1094,64942
chr6:24718875-24719314	chr6	+	24718904	24719325	True	NM_030939,NM_018473	chr6,chr6	-,+	C6orf62,ACOT13	128,-51695
chr22:31475219-31476192	chr22	+	31475386	31476160	True	NM_134269,NM_006932,NM_134270,NM_080430	chr22,chr22,chr22,chr22	+,+,+,-	SMTN,SMTN,SMTN,SELM	1144,1144,1144,27441
chr9:82186781-82187334	chr9	+	82186801	82187229	True	NM_002072,NM_007005	chr9,chr9	-,+	GNAQ,TLE4	-1540582,13
chr4:130012327-130013263	chr4	+	130012362	130013250	True	NM_001099783,NM_144643,NM_173487	chr4,chr4,chr4	+,-,+	C4orf33,SCLT1,C4orf33	4031,1571,1578
chr1:100436056-100436953	chr1	+	100436077	100436755	True	NM_012243,NM_194292	chr1,chr1	+,-	SLC35A3,SASS6	-588,161814
chr17:27896206-27897682	chr17	+	27896326	27897714	True	NM_138349,NM_198147	chr17,chr17	+,-	TP53I13,ABHD15	-638,-2284
chr12:95611974-95612637	chr12	+	95612046	95612625	True	NM_017599,NM_018351	chr12,chr12	+,-	VEZT,FGD6	-575,-806
chr9:96799173-96800259	chr9	+	96799182	96800212	True	NM_177995,NM_021570	chr9,chr9	+,-	PTPDC1,BARX1	-6163,-81574
chr6:37321043-37321252	chr6	+	37321138	37321306	True	NM_183078,NM_001162900,NM_003958	chr6,chr6,chr6	+,-,+	RNF8,TMEM217,RNF8	441,-95207,441
chr6:33562271-33563021	chr6	+	33562467	33563004	True	NR_027908,NR_028361	chr6,chr6	-,+	C6orf227,GGNBP1	-1352,-11045
chr17:71257624-71258144	chr17	+	71257876	71258036	True	NM_001129885,NM_017941	chr17,chr17	-,+	CPSF4L,C17orf80	33,-29151
chr17:18011511-18011757	chr17	+	18011579	18011641	True	NM_016239,NM_145691	chr17,chr17	+,-	MYO15A,ATPAF2	378,-69099
chr7:117066398-117067418	chr7	+	117066618	117067442	True	NR_023315,NM_000492,NM_130768	chr7,chr7,chr7	-,+,-	ASZ1,CFTR,ASZ1	185,52574,185
chr10:35634911-35635761	chr10	+	35634914	35635493	True	NM_001198777,NM_145012	chr10,chr10	-,+	CUL2,CCNY	-255344,-9163
chr3:4508114-4508492	chr3	+	4508166	4508510	True	NM_001099952,NM_182760,NM_001164675,NM_001164674	chr3,chr3,chr3,chr3	+,-,-,-	ITPR1,SUMF1,SUMF1,SUMF1	26521,506,506,506
chr2:183886790-183888365	chr2	+	183886790	183888217	True	NM_013436,NM_001142314	chr2,chr2	-,+	NCKAP1,DUSP19	15072,55069
chr12:16063876-16064079	chr12	+	16063885	16064121	True	NM_004447,NM_015954	chr12,chr12	-,+	EPS8,DERA	-121375,64
chr12:58159553-58159863	chr12	+	58159708	58159868	True	NM_000785,NM_023033,NM_005371,NM_015433,NM_206914	chr12,chr12,chr12,chr12,chr12	-,-,-,+,+	CYP27B1,METTL1,METTL1,METTL21B,METTL21B	1158,6096,6096,6514,6514
chr7:76612087-76612461	chr7	+	76612138	76612372	True	NR_023383,NM_006682	chr7,chr7	+,-	PMS2P11,FGL2	-2050,216828
chr7:76612087-76612461	chr7	+	76114024	76114258	False	NR_003262,NM_001102596	chr7,chr7	-,+	FDPSL2A,DTX2	-9707,-4248
chr17:40717046-40717530	chr17	+	40717060	40717546	True	NM_170607,NM_198204,NM_198205,NM_025233,NM_001042531,NM_001042530,NM_001042532,NM_013290,NM_001042529	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,+,+,-,+	MLX,MLX,MLX,COASY,COASY,COASY,COASY,PSMC3IP,COASY	1531,1531,1531,-3019,-3019,-3019,-3019,12251,-3019
chr1:171809994-171810283	chr1	+	171810098	171810270	True	NR_033704,NM_001136127,NM_015569	chr1,chr1,chr1	-,+,+	VAMP4,DNM3,DNM3	-98719,350,350
chr1:35224404-35225222	chr1	+	35224416	35225086	True	NM_001164824,NM_153212,NM_005268	chr1,chr1,chr1	-,+,+	C1orf212,GJB4,GJB5	99610,255,-3749
chr3:125877800-125878376	chr3	+	125877973	125878353	True	NM_012190,NM_001012337	chr3,chr3	-,+	ALDH1L1,ROPN1B	21182,-189997
chr12:12225355-12226102	chr12	+	12225421	12226145	True	NM_138722,NM_138723,NM_030766,NM_002336	chr12,chr12,chr12,chr12	+,+,+,-	BCL2L14,BCL2L14,BCL2L14,LRP6	-1070,-1594,-1070,193721
chr20:22558680-22559023	chr20	+	22558686	22559018	True	NM_021784,NM_153675,NR_001558,NM_001052	chr20,chr20,chr20,chr20	-,-,-,+	FOXA2,FOXA2,NCRNA00261,SSTR4	6133,7133,312,457038
chr15:31175503-31175920	chr15	+	31175503	31175719	True	NM_017762,NM_001146095	chr15,chr15	-,+	MTMR10,FAN1	108146,20335
chr8:98657197-98657702	chr8	+	98657202	98657655	True	NM_033512,NM_178812	chr8,chr8	-,+	TSPYL5,MTDH	-367026,-846
chr19:10831397-10831771	chr19	+	10831482	10831816	True	NR_030368,NM_001005360,NM_001005362,NM_004945,NM_001005361,NR_024333,NM_001190716	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,-,+	MIR638,DNM2,DNM2,DNM2,DNM2,LOC147727,DNM2	-2455,-2806,-2806,-2806,-2806,-66934,-2806
chr19:19175189-19175728	chr19	+	19175337	19175775	True	NM_001017392,NM_178526	chr19,chr19	-,+	SUGP2,SLC25A42	-30957,-585
chr17:5488160-5489376	chr17	+	5488205	5489299	True	NM_014922,NM_024039,NM_033004,NM_033007,NM_033006,NM_001033053	chr17,chr17,chr17,chr17,chr17,chr17	-,+,-,-,-,-	NLRP1,MIS12,NLRP1,NLRP1,NLRP1,NLRP1	-373,-98009,-373,-373,-373,-373
chr22:21983333-21983657	chr22	+	21983386	21983702	True	NM_152612,NM_001017964	chr22,chr22	+,-	CCDC116,YDJC	3383,688
chr9:117093759-117094059	chr9	+	117093763	117093937	True	NM_000607,NM_000608,NM_030767	chr9,chr9,chr9	+,+,-	ORM1,ORM2,AKNA	-8511,-1745,62798
chr3:9812178-9812531	chr3	+	9812279	9812479	True	NM_003656,NM_016829	chr3,chr3	-,+	CAMK1,OGG1	-611,-20702
chr1:206681335-206681563	chr1	+	206681350	206681612	True	NM_182664,NM_001201478,NM_182663	chr1,chr1,chr1	+,-,+	RASSF5,EIF2D,RASSF5	-522,104342,-522
chr8:145558415-145558647	chr8	+	145558444	145558656	True	NM_024531,NM_012079,NM_031309	chr8,chr8,chr8	+,-,-	GPR172A,DGAT1,SCRT1	23568,-7877,1337
chr12:124069683-124070988	chr12	+	124069748	124070723	True	NM_001414,NM_006815	chr12,chr12	-,+	EIF2B1,TMED2	47657,-723
chr8:144101188-144101807	chr8	+	144101294	144101641	True	NM_002346,NM_001127213,NR_026913	chr8,chr8,chr8	+,+,-	LY6E,LY6E,LOC100133669	-1443,-1443,-1487
chr9:6644601-6644913	chr9	+	6644608	6644945	True	NM_000170,NM_001146696	chr9,chr9	-,+	GLDC,KDM4C	797,75917
chr3:49167675-49168202	chr3	+	49167685	49168231	True	NM_001199161,NM_001199160,NM_001199162,NM_173546,NM_006677,NM_002292	chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,+,-,-	USP19,USP19,USP19,KLHDC8B,USP19,LAMB2	-9314,-9314,-9314,40786,-9314,2418
chr3:169425104-169427093	chr3	+	169425459	169427094	True	NM_001185118,NM_001205194	chr3,chr3	+,-	MYNN,MECOM	63758,-43896
chr1:29139539-29139744	chr1	+	29139609	29139727	True	NM_000911,NM_005644	chr1,chr1	+,-	OPRD1,TAF12	-1006,-170005
chr4:5988992-5989624	chr4	+	5989449	5989671	True	NR_037863,NM_001014809	chr4,chr4	+,-	LOC285484,CRMP1	212788,-94664
chr4:40060737-40062023	chr4	+	40061289	40061872	True	NR_027277,NM_018177	chr4,chr4	-,+	LOC344967,N4BP2	-2470,-2830
chr9:75140758-75142233	chr9	+	75140929	75142244	True	NM_138691,NM_006007	chr9,chr9	+,-	TMC1,ZFAND5	-4266,-160766
chr1:57430097-57430501	chr1	+	57430216	57430514	True	NM_000562,NM_000066	chr1,chr1	+,-	C8A,C8B	-109824,1224
chr2:64372052-64372264	chr2	+	64372070	64372303	True	NM_006759,NM_020651	chr2,chr2	+,-	UGP2,PELI1	-303110,-465
chr2:9697147-9697375	chr2	+	9697190	9697412	True	NM_001039613,NM_003183	chr2,chr2	+,-	IAH1,ADAM17	-82580,-1273
chr16:2205239-2205664	chr16	+	2205278	2205627	True	NR_002736,NM_014353,NM_032271	chr16,chr16,chr16	-,+,+	SNORD60,RAB26,TRAF7	-172,-6678,171
chr14:64320523-64321026	chr14	+	64320569	64321002	True	NM_182914,NM_015180,NM_030791	chr14,chr14,chr14	+,+,-	SYNE2,SYNE2,SGPP1	-937,-937,-125813
chr3:142317765-142318330	chr3	+	142317888	142318134	True	NM_001184,NM_001145319	chr3,chr3	-,+	ATR,PLS1	-20220,-2720
chr19:3701688-3702408	chr19	+	3701983	3702137	True	NM_014428,NM_012398,NM_001195733	chr19,chr19,chr19	+,-,-	TJP3,PIP5K1C,PIP5K1C	26236,-1506,-1506
chr1:51430580-51430891	chr1	+	51430759	51430860	True	NM_001262,NM_007051,NM_078626	chr1,chr1,chr1	+,-,+	CDKN2C,FAF1,CDKN2C	3506,-4823,4781
chr19:53725065-53725731	chr19	+	53725202	53725372	True	NM_024733,NM_173856	chr19,chr19	-,+	ZNF665,VN1R2	-28583,36172
chr7:137690339-137690658	chr7	+	137690591	137690707	True	NM_194071,NM_001190906	chr7,chr7	-,+	CREB3L2,AKR1D1	-3745,70470
chr13:21520561-21520782	chr13	+	21520671	21520827	True	NM_022459,NM_005870	chr13,chr13	-,+	XPO4,SAP18	-43758,193825
chr10:1093965-1094389	chr10	+	1094172	1094436	True	NM_004508,NM_014023	chr10,chr10	-,+	IDI1,WDR37	675,8339
chr20:32263480-32264256	chr20	+	32263508	32264054	True	NM_031231,NM_031232,NM_001024675	chr20,chr20,chr20	-,-,+	NECAB3,NECAB3,C20orf134	-1244,-1244,-9256
chr6:134666048-134667993	chr6	+	134666309	134668042	True	NM_004865,NM_001143676	chr6,chr6	+,-	TBPL1,SGK1	-392059,-27113
chr14:68286567-68286953	chr14	+	68286613	68287001	True	NM_133510,NM_015346,NM_133509,NM_002877	chr14,chr14,chr14,chr14	+,-,+,+	RAD51L1,ZFYVE26,RAD51L1,RAD51L1	-168,-3307,-168,-168
chr5:175791088-175791380	chr5	+	175791128	175791219	True	NM_173664,NM_001079685,NM_001079684,NM_020444	chr5,chr5,chr5,chr5	+,-,-,-	ARL10,KIAA1191,KIAA1191,KIAA1191	1282,-2319,-2319,-2319
chr20:33678335-33678959	chr20	+	33678482	33678836	True	NM_006404,NM_015638,NM_199368	chr20,chr20,chr20	+,-,-	PROCR,TRPC4AP,TRPC4AP	80937,1832,1832
chr12:123756645-123756923	chr12	+	123756699	123756972	True	NM_001143905,NM_004642	chr12,chr12	+,-	C12orf65,CDK2AP1	-38460,-12
chr6:84221847-84222218	chr6	+	84221917	84221999	True	NM_002395,NM_001170423,NM_153362	chr6,chr6,chr6	-,+,+	ME1,PRSS35,PRSS35	-80979,194,194
chr6:7520040-7520705	chr6	+	7520145	7520697	True	NM_001008844,NM_001170693	chr6,chr6	+,-	DSP,CAGE1	21172,-130203
chr4:26860978-26861444	chr4	+	26860980	26861453	True	NM_001169118,NM_001169117,NM_000730,NM_020860	chr4,chr4,chr4,chr4	+,+,-,+	STIM2,STIM2,CCKAR,STIM2	859,859,-368938,859
chr2:118771302-118771531	chr2	+	118771367	118771549	True	NM_019044,NM_016133	chr2,chr2	-,+	CCDC93,INSIG2	240,74500
chr14:101192911-101193134	chr14	+	101192919	101193053	True	NM_003836,NM_020836	chr14,chr14	+,-	DLK1,BEGAIN	148,-156788
chr12:52245587-52245802	chr12	+	52245658	52245720	True	NM_001130015,NM_001013690	chr12,chr12	+,-	ANKRD33,FIGNL2	36072,-19957
chr2:201980507-201980865	chr2	+	201980807	201980881	True	NM_173822,NM_001202517,NM_001202516,NM_001202519,NM_001127183,NM_001127184,NM_003879	chr2,chr2,chr2,chr2,chr2,chr2,chr2	-,+,+,+,+,+,+	FAM126B,CFLAR,CFLAR,CFLAR,CFLAR,CFLAR,CFLAR	-44415,-5,-5,-5,2387,-5,-5
chr1:44116792-44118444	chr1	+	44116960	44117950	True	NR_033827,NM_014663	chr1,chr1	-,+	LOC100132774,KDM4A	55117,-1214
chr17:27533569-27535367	chr17	+	27534209	27535308	True	NM_203318,NM_005208	chr17,chr17	-,+	MYO18A,CRYBA1	-26802,38566
chrX:49686201-49687115	chrX	+	49686290	49686910	True	NM_001127898,NM_001127899,NR_026742	chrX,chrX,chrX	+,+,-	CLCN5,CLCN5,LOC158572	314,314,-42331
chr2:183581574-183582126	chr2	+	183581629	183582161	True	NM_018981,NM_001463	chr2,chr2	+,-	DNAJC10,FRZB	-684,149387
chr17:75370191-75370474	chr17	+	75370190	75370484	True	NM_001113494,NM_001113493,NR_036200	chr17,chr17,chr17	+,+,-	SEPT9,SEPT9,MIR4316	1680,-969,22702
chr7:141399093-141400581	chr7	+	141399139	141400209	True	NM_001080392,NM_001105558	chr7,chr7	-,+	KIAA1147,WEE2	1797,7943
chr7:102396610-102396824	chr7	+	102396618	102396808	True	NM_032959,NR_026879,NM_001145269,NM_001145268	chr7,chr7,chr7,chr7	-,+,+,+	POLR2J2,FAM185A,FAM185A,FAM185A	-84436,-7270,-7270,-7270
chr7:102396610-102396824	chr7	-	76744429	76744479	False	NM_020879,NM_006682	chr7,chr7	+,-	CCDC146,FGL2	7454,84721
chr18:5294827-5295137	chr18	+	5294832	5295108	True	NM_001143823,NM_003409,NR_026569,NR_015389	chr18,chr18,chr18,chr18	-,-,-,+	ZFP161,ZFP161,ZFP161,LOC339290	981,981,642,-56784
chr5:156568384-156568690	chr5	+	156568401	156568529	True	NM_004270,NM_001100816,NM_005546	chr5,chr5,chr5	-,-,+	MED7,MED7,ITK	1442,1307,39377
chr14:51411625-51412349	chr14	+	51411630	51412154	True	NM_181814,NM_002863,NM_001163940	chr14,chr14,chr14	+,-,-	ABHD12B,PYGL,PYGL	-72803,-382,-382
chr7:64363987-64364557	chr7	+	64364056	64364393	True	NR_002789,NR_003099,NM_021148	chr7,chr7,chr7	-,+,+	LOC168474,ZNF273,ZNF273	-49878,-487,-487
chr10:106094164-106095348	chr10	+	106094206	106095010	True	NM_001008723,NM_033397	chr10,chr10	+,-	CCDC147,ITPRIP	18511,-543
chr2:114358742-114359053	chr2	+	114359003	114359091	True	NR_024077,NR_024004,NR_024005	chr2,chr2,chr2	+,-,-	WASH2P,DDX11L2,DDX11L2	-17824,2253,112
chr22:42915980-42916330	chr22	+	42916213	42916331	True	NR_027786,NM_015703	chr22,chr22	+,-	SERHL,RRP7A	-19679,-384
chr19:50030207-50030512	chr19	+	50030321	50030509	True	NM_020650,NR_029703	chr19,chr19	+,-	RCN3,MIR150	365,-26196
chr22:24343927-24345193	chr22	+	24344362	24345106	True	NR_003081,NM_000854	chr22,chr22	-,+	GSTTP1,GSTT2	2206,-22112
chr22:24343927-24345193	chr22	+	24398613	24399458	False	NR_003082,NM_012295,NM_001201429,NM_001199281	chr22,chr22,chr22,chr22	-,+,+,+	GSTTP2,CABIN1,CABIN1,CABIN1	2491,8306,8306,8361
chr15:77924433-77924711	chr15	+	77924646	77924724	True	NM_018200,NM_032808	chr15,chr15	+,-	HMG20A,LINGO1	-211454,35
chr7:92768801-92769925	chr7	+	92768807	92769921	True	NM_024553,NM_152703	chr7,chr7	+,-	CCDC132,SAMD9L	91731,7809
chr9:74382233-74382819	chr9	+	74382252	74382868	True	NM_001135820,NM_013390,NM_182505	chr9,chr9,chr9	-,-,+	TMEM2,TMEM2,C9orf85	982,982,143554
chr1:236032154-236032492	chr1	+	236032272	236032442	True	NM_000081,NM_003272	chr1,chr1	-,+	LYST,GPR137B	-2052,273389
chr10:74452182-74452450	chr10	+	74452183	74452273	True	NM_138357,NM_006077	chr10,chr10	+,-	CCDC109A,CBARA1	-345,-66234
chr1:8022091-8023534	chr1	+	8022100	8023131	True	NM_001561,NM_007262,NM_001123377	chr1,chr1,chr1	-,+,+	TNFRSF9,PARK7,PARK7	-18875,-437,-437
chr5:137671913-137673384	chr5	+	137672389	137673398	True	NM_001135647,NM_001790,NM_022809,NM_016605	chr5,chr5,chr5,chr5	+,-,-,+	FAM53C,CDC25C,CDC25C,FAM53C	6,-4873,-4873,305
chr13:32317847-32319741	chr13	+	32318250	32319747	True	NM_130806,NM_001166058,NM_001136571	chr13,chr13,chr13	+,+,-	RXFP2,RXFP2,ZAR1L	-4622,-4622,566394
chr7:44247257-44247616	chr7	+	44247260	44247665	True	NM_006555,NM_000162	chr7,chr7	+,-	YKT6,GCK	-6733,-18238
chr9:36168046-36168709	chr9	+	36168248	36168731	True	NM_001190383,NM_005893	chr9,chr9	-,+	GNE,CCIN	89815,657
chr7:129689549-129690076	chr7	+	129689714	129689897	True	NM_016478,NM_014997	chr7,chr7	-,+	ZC3HC1,KLHDC10	1386,20451
chr11:75525317-75525719	chr11	+	75525353	75525741	True	NM_003369,NM_207577	chr11,chr11	+,-	UVRAG,MAP6	470,-145874
chr7:28472043-28473715	chr7	+	28472121	28473748	True	NM_004904,NM_175061	chr7,chr7	+,-	CREB5,JAZF1	1485,-251684
chr19:12251599-12252450	chr19	+	12251681	12252308	True	NM_003437,NM_001203250,NM_021143	chr19,chr19,chr19	+,-,-	ZNF136,ZNF20,ZNF20	21563,-459,-459
chr9:128023619-128023932	chr9	+	128023709	128023971	True	NM_005347,NM_015635	chr9,chr9	-,+	HSPA5,GAPVD1	-20043,139
chr7:106699587-106699820	chr7	+	106699780	106699864	True	NM_002736,NM_175884	chr7,chr7	+,-	PRKAR2B,FLJ36031	-14653,-398146
chr19:45662412-45662743	chr19	+	45662619	45662773	True	NM_212550,NM_198478	chr19,chr19	+,-	BLOC1S3,NKPD1	19229,685
chr10:119806964-119808242	chr10	+	119807063	119808031	True	NR_026940,NM_014904,NR_026941,NR_026939	chr10,chr10,chr10,chr10	+,-,+,+	CASC2,RAB11FIP2,CASC2,CASC2	-782,-949,-782,-782
chr19:46999684-47000555	chr19	+	46999689	47000455	True	NM_005184,NM_020709	chr19,chr19	+,-	CALM3,PNMAL2	104056,-520
chr12:122986708-122987452	chr12	+	122986839	122987065	True	NM_014708,NM_017612	chr12,chr12	+,-	KNTC1,ZCCHC8	24743,-1321
chr16:718248-718451	chr16	+	718310	718416	True	NM_001005920,NM_003961,NM_138769	chr16,chr16,chr16	-,+,+	JMJD8,RHBDL1,RHOT2	16073,7658,-228
chr1:89476186-89476900	chr1	+	89476393	89476917	True	NM_018284,NM_006256	chr1,chr1	-,+	GBP3,PKN2	11684,-326522
chrX:114804411-114804910	chrX	+	114804551	114804818	True	NM_005032,NM_020871	chrX,chrX	+,-	PLS3,LRCH2	-9432,-335916
chr19:41903471-41903704	chr19	+	41903512	41903734	True	NM_020158,NM_000709,NM_001164783	chr19,chr19,chr19	-,+,+	EXOSC5,BCKDHA,BCKDHA	-256,19,19
chr2:214235880-214237038	chr2	+	214236177	214237080	True	NM_001079526,NM_024532	chr2,chr2	-,+	IKZF2,SPAG16	-219844,-87123
chr11:66334735-66335280	chr11	+	66334737	66335123	True	NM_003793,NM_001104	chr11,chr11	-,+	CTSF,ACTN3	974,-20404
chr12:117795240-117796998	chr12	+	117795272	117796932	True	NM_000620,NM_001204218,NM_153348	chr12,chr12,chr12	-,-,+	NOS1,NOS1,FBXW8	2725,2725,-446570
chr20:2519099-2520825	chr20	+	2519319	2520615	True	NM_024325,NM_080751	chr20,chr20	-,+	ZNF343,TMC2	-29541,-2117
chr10:120788431-120788788	chr10	+	120788432	120788634	True	NR_002917,NM_199461	chr10,chr10	-,+	SNORA19,NANOS1	31066,593
chr12:121450375-121450825	chr12	+	121450673	121450784	True	NM_022895,NM_000545	chr12,chr12	-,+	C12orf43,HNF1A	3573,-34175
chr2:128155648-128155880	chr2	+	128155684	128155850	True	NM_000312,NM_006609	chr2,chr2	+,-	PROC,MAP3K2	20145,-54914
chr1:28427873-28428337	chr1	+	28428220	28428340	True	NR_027268,NM_016311	chr1,chr1	-,+	LOC653566,ATPIF1	-5151,134261
chrX:23799873-23800869	chrX	+	23800181	23800863	True	NM_001037171,NM_002970,NR_027783	chrX,chrX,chrX	-,+,+	ACOT9,SAT1,SAT1	-38774,411,411
chr5:177091931-177092626	chr5	+	177091930	177092585	True	NR_026921,NM_007255	chr5,chr5	-,+	LOC202181,B4GALT7	6749,-64872
chr5:177091931-177092626	chr5	-	175672162	175672364	False	NR_036494,NM_198567	chr5,chr5	-,+	LOC643201,C5orf25	-45864,-6843
chrY:21239214-21239482	chrY	+	21239313	21239519	True	NR_002159,NR_001543	chrY,chrY	+,-	TTTY9B,TTTY14	-347596,-11
chr11:1890841-1891075	chr11	+	1890848	1890960	True	NR_036185,NM_001013254,NM_001013255,NM_001013253	chr11,chr11,chr11,chr11	-,+,+,+	MIR4298,LSP1,LSP1,LSP1	-10082,1138,1193,-996
chr12:51633846-51635559	chr12	+	51634029	51635438	True	NM_014764,NM_001136269,NM_001136268,NR_026893,NM_001136264,NM_001136267,NM_001136266	chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,+,-,+,+,+	DAZAP2,DAZAP2,DAZAP2,POU6F1,DAZAP2,DAZAP2,DAZAP2	-1572,-1572,-1572,-22552,-1572,-1572,-1572
chr20:49575689-49576124	chr20	+	49575709	49576049	True	NM_003859,NM_014484	chr20,chr20	-,+	DPM1,MOCS3	-649,-397
chr3:156585919-156586180	chr3	+	156585921	156586215	True	NM_001193283,NR_003284	chr3,chr3	+,-	LEKR1,PA2G4P4	-41824,-56111
chr17:8300706-8301011	chr17	+	8300832	8300970	True	NM_001146684,NM_001025579	chr17,chr17	-,+	RNF222,NDEL1	224,38208
chr11:111745260-111746235	chr11	+	111745632	111746254	True	NM_138378,NM_001077690,NM_001077691,NM_024740,NM_022761,NM_001077692	chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,+,-	FDXACB1,ALG9,ALG9,ALG9,C11orf1,ALG9	3949,-3327,-3628,-3327,3693,-3628
chr6:160769992-160770299	chr6	+	160770014	160770330	True	NM_003058,NM_021977	chr6,chr6	-,+	SLC22A2,SLC22A3	-90051,-640
chr2:99549664-99550303	chr2	+	99549837	99550189	True	NM_207362,NM_144706	chr2,chr2	-,+	C2orf55,C2orf15	2545,207995
chr11:9284581-9284926	chr11	+	9284632	9284709	True	NM_006391,NM_015213	chr11,chr11	+,-	IPO7,DENND5A	121459,2221
chr8:102133502-102134090	chr8	+	102133549	102133812	True	NM_001042511,NR_033962	chr8,chr8	-,+	ZNF706,FLJ42969	84120,-69318
chr7:150074418-150075265	chr7	+	150074450	150075312	True	NM_002889,NM_173680,NM_013400,NM_014374,NM_001099695,NM_001099696	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,+,+	RARRES2,ZNF775,REPIN1,REPIN1,REPIN1,REPIN1	-35687,1093,-8633,-6254,-8633,-8633
chr16:11764984-11765706	chr16	+	11765072	11765502	True	NM_003498,NM_015914	chr16,chr16	+,-	SNN,TXNDC11	-2834,71196
chr19:19383353-19383554	chr19	+	19383360	19383508	True	NM_023002,NM_001001524,NM_015329	chr19,chr19,chr19	-,-,+	HAPLN4,TM6SF2,MAU2	-9764,616,48121
chr7:107203110-107203925	chr7	+	107203260	107203888	True	NM_001161520,NM_181733,NM_006348,NM_181581	chr7,chr7,chr7,chr7	-,-,-,+	COG5,COG5,COG5,DUS4L	1121,1121,1121,543
chr19:44863516-44864128	chr19	+	44863761	44864133	True	NM_001083335,NM_013380,NM_181756	chr19,chr19,chr19	-,-,+	ZFP112,ZFP112,ZNF233	-2905,-2905,-99738
chr2:200332519-200332981	chr2	+	200332646	200332854	True	NM_015265,NM_001172509,NM_001172517,NR_026830	chr2,chr2,chr2,chr2	-,-,-,+	SATB2,SATB2,SATB2,FLJ32063	3186,-9827,-2815,-34
chr22:41857757-41858220	chr22	+	41857954	41858225	True	NM_032758,NM_001098	chr22,chr22	-,+	PHF5A,ACO2	6534,6903
chr4:53577310-53578181	chr4	+	53577496	53578188	True	NR_024031,NM_022832,NR_003016	chr4,chr4,chr4	+,-,+	KIAA0114,USP46,SNORA26	432,-51994,1227
chr7:73705774-73706061	chr7	+	73705856	73705968	True	NM_181471,NM_003388,NM_032421	chr7,chr7,chr7	-,+,+	RFC2,CLIP2,CLIP2	-37118,-2106,-2106
chr11:67274466-67274881	chr11	+	67274589	67274919	True	NM_003977,NM_005851,NM_004910,NM_001130848	chr11,chr11,chr11,chr11	+,-,-,-	AIP,CDK2AP2,PITPNM1,PITPNM1	-24141,1233,-1746,-1746
chr21:38494951-38496139	chr21	+	38495006	38495944	True	NM_003316,NR_028352	chr21,chr21	+,-	TTC3,PIGP	-39824,-49548
chr3:45838196-45838605	chr3	+	45838212	45838504	True	NM_006641,NM_020208,NM_022405	chr3,chr3,chr3	+,-,-	CCR9,SLC6A20,SLC6A20	89491,-177,-177
chr20:52192748-52192958	chr20	+	52192760	52193002	True	NM_006526,NM_001193421	chr20,chr20	-,+	ZNF217,TSHZ2	6684,-390989
chr9:131531851-131532649	chr9	+	131532048	131532278	True	NM_006336,NM_018201	chr9,chr9	-,+	ZER1,TBC1D13	1970,17231
chr16:11370347-11370606	chr16	+	11370513	11370653	True	NM_005425,NM_021247,NM_152308,NM_002761,NM_002762	chr16,chr16,chr16,chr16,chr16	-,-,+,-,-	TNP2,PRM3,C16orf75,PRM1,PRM2	-7353,-3061,68657,4589,-176
chr7:29002344-29002685	chr7	+	29002349	29002671	True	NM_014817,NM_004067	chr7,chr7	-,+	TRIL,CHN2	-4320,231449
chr3:52807566-52808655	chr3	+	52807684	52808334	True	NM_003157,NM_001193533,NM_001166435,NM_001166434,NM_001166436,NM_002215	chr3,chr3,chr3,chr3,chr3,chr3	-,-,+,+,+,+	NEK4,NEK4,ITIH1,ITIH1,ITIH1,ITIH1	-2719,-2719,5602,4188,5602,3273
chr11:133712679-133713704	chr11	+	133712726	133713747	True	NM_174927,NR_027276	chr11,chr11	-,+	SPATA19,LOC100128239	1695,188419
chr5:74989918-74991624	chr5	+	74990067	74991297	True	NM_152408,NM_016218	chr5,chr5	-,+	POC5,POLK	17039,-182465
chr20:62435005-62435665	chr20	+	62435012	62435620	True	NM_080622,NM_025224	chr20,chr20	+,-	ABHD16B,ZBTB46	56945,1286
chr3:15901134-15901517	chr3	+	15901275	15901419	True	NM_015199,NR_030289	chr3,chr3	-,+	ANKRD28,MIR563	-222,13858
chr1:51785569-51787374	chr1	+	51785649	51787343	True	NM_001080494,NM_014372	chr1,chr1	-,+	TTC39A,RNF11	645,-83755
chr9:46707030-46707735	chr9	+	46707272	46707720	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-3076542,-19760
chr9:46707030-46707735	chr9	-	46824076	46824524	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-3193346,-136561
chr9:46707030-46707735	chr9	-	44382541	44382617	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	607618,-751811
chr9:46707030-46707735	chr9	-	41999317	41999765	False	NR_003670,NM_001012421	chr9,chr9	-,+	KGFLP2,ANKRD20A2	19872,368537
chr5:177209482-177209849	chr5	+	177209490	177209794	True	NR_003615,NM_173663	chr5,chr5	+,-	LOC728554,FAM153A	92467,-1985
chr5:177209482-177209849	chr5	-	177434030	177434088	False	NM_006261,NM_001079527	chr5,chr5	-,+	PROP1,FAM153C	-10787,1600
chr5:177209482-177209849	chr5	-	175488295	175488732	False	NM_032361,NM_001079529	chr5,chr5	-,+	THOC3,FAM153B	-92750,23176
chr4:155703168-155703726	chr4	+	155703309	155703484	True	NM_144979,NM_021870	chr4,chr4	+,-	RBM46,FGG	-933,-169407
chr3:48286395-48286630	chr3	+	48286561	48286622	True	NM_005793,NM_016089	chr3,chr3	-,+	NME6,ZNF589	56277,-4016
chr7:26244702-26245425	chr7	+	26244729	26245372	True	NM_002137,NM_007276,NM_031243,NM_016587	chr7,chr7,chr7,chr7	-,+,-,+	HNRNPA2B1,CBX3,HNRNPA2B1,CBX3	-4316,-3957,-4316,-3464
chr2:74601742-74602548	chr2	+	74601908	74602494	True	NM_001135040,NM_001135041,NM_023019,NM_001190837,NR_024463,NM_004082	chr2,chr2,chr2,chr2,chr2,chr2	-,-,-,-,+,-	DCTN1,DCTN1,DCTN1,DCTN1,LOC100189589,DCTN1	5038,-46,-46,5038,10350,5038
chr19:39423904-39424302	chr19	+	39424108	39424265	True	NM_017827,NM_001145901,NM_021107,NM_033362,NM_033363	chr19,chr19,chr19,chr19,chr19	-,-,+,+,+	SARS2,SARS2,MRPS12,MRPS12,MRPS12	-2572,-2572,-2565,-2811,-2565
chr5:38445978-38446200	chr5	+	38446010	38446215	True	NM_001127671,NM_182801	chr5,chr5	-,+	LIFR,EGFLAM	110583,-425
chr12:6861099-6861796	chr12	+	6861165	6861761	True	NM_005439,NR_026581,NM_002824	chr12,chr12,chr12	-,-,+	MLF2,MLF2,PTMS	371,925,13779
chr10:121656585-121658468	chr10	+	121656775	121658507	True	NM_024834,NM_007190,NR_037771	chr10,chr10,chr10	-,+,+	MCMBP,SEC23IP,SEC23IP	-24381,-4747,-4747
chr16:21965506-21966080	chr16	+	21965527	21966095	True	NM_173806,NM_003366	chr16,chr16	-,+	PDZD9,UQCRC2	46386,-969
chr6:46633574-46635269	chr6	+	46634003	46635266	True	NM_016593,NM_004277	chr6,chr6	-,+	CYP39A1,SLC25A27	-13480,-13409
chrX:118698381-118699182	chrX	+	118698600	118699168	True	NM_181762,NM_001170569,NM_003336,NM_001170570,NM_022101	chrX,chrX,chrX,chrX,chrX	+,-,+,-,-	UBE2A,CXorf56,UBE2A,CXorf56,CXorf56	9330,254,9330,279,279
chr16:67143203-67143407	chr16	+	67143280	67143414	True	NM_025187,NM_033309	chr16,chr16	+,-	C16orf70,B3GNT9	500,41538
chr6:68749500-68750318	chr6	+	68749618	68750344	True	NM_018368,NM_001704	chr6,chr6	-,+	LMBRD1,BAI3	1756755,595287
chr13:100168408-100169586	chr13	+	100168537	100169069	True	NM_004951,NM_004800	chr13,chr13	-,+	GPR183,TM9SF2	-208788,-14867
chr17:47928129-47928430	chr17	+	47928146	47928338	True	NM_001077504,NM_001077505,NM_001077506,NM_007067,NM_001077503,NM_170685	chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,+,-,-	TAC4,TAC4,TAC4,MYST2,TAC4,TAC4	-2767,-2767,-2767,-62216,-2767,-2767
chr11:30344898-30345183	chr11	+	30345007	30345221	True	NM_152316,NM_001584	chr11,chr11	+,-	C11orf46,MPPED2	-409,256869
chr1:145973880-145974734	chr1	+	145973887	145974603	True	NR_003377,NM_001097616	chr1,chr1	-,+	PDZK1P1,GPR89C	-31268,-90075
chr1:145973880-145974734	chr1	+	147515621	147516337	False	NR_003377,NM_001097616	chr1,chr1	-,+	PDZK1P1,GPR89C	-31290,-90110
chr19:8007838-8008198	chr19	+	8007954	8008149	True	NM_006351,NR_030717	chr19,chr19	-,+	TIMM44,SNAPC2	610,-22139
chr17:61555177-61556204	chr17	+	61555213	61556241	True	NM_152830,NM_001915,NM_000789,NM_001178057	chr17,chr17,chr17,chr17	+,-,+,+	ACE,CYB561,ACE,ACE	5936,-31491,-842,5936
chr19:49990699-49990919	chr19	+	49990737	49990887	True	NR_026712,NR_000020,NR_000021,NM_012423,NR_000019,NR_000018,NM_001015,NR_029703	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,+,+,-	RPL13AP5,SNORD33,SNORD32A,RPL13A,SNORD34,SNORD35A,RPS11,MIR150	-9,2986,2335,-9,3276,3544,8746,13288
chr3:120026845-120027490	chr3	+	120026995	120027208	True	NM_001099678,NM_001168331	chr3,chr3	-,+	LRRC58,NDUFB4	41033,287919
chr22:17566207-17566410	chr22	+	17566333	17566407	True	NM_031890,NM_014339	chr22,chr22	-,+	CECR6,IL17RA	35856,-533
chr1:148555999-148556261	chr1	+	148556103	148556247	True	NM_001164262,NM_173638,NM_001170755	chr1,chr1,chr1	-,+,+	PPIAL4F,NBPF15,NBPF15	-353567,4599,1940
chr1:148555999-148556261	chr1	+	144593797	144593941	False	NM_001037675,NR_003242	chr1,chr1	+,-	NBPF9,C1orf152	21017,18836
chr2:118772746-118773682	chr2	+	118773025	118773554	True	NM_019044,NM_016133	chr2,chr2	-,+	CCDC93,INSIG2	-1286,72495
chr2:113303375-113304229	chr2	+	113303586	113304060	True	NM_001137604,NR_033871,NM_019014	chr2,chr2,chr2	+,-,+	POLR1B,FLJ42351,POLR1B	-4147,97747,-4147
chr8:144244059-144245686	chr8	+	144244067	144245294	True	NM_178172,NM_001135655,NM_002347,NM_001130478	chr8,chr8,chr8,chr8	+,-,-,-	GPIHBP1,LY6H,LY6H,LY6H	49773,-2312,-2610,-2014
chr19:18359224-18359521	chr19	+	18359289	18359463	True	NM_000923,NR_036155,NR_036575	chr19,chr19,chr19	-,+,-	PDE4C,MIR3188,LOC729966	-279,33423,6816
chr2:131111138-131112545	chr2	+	131111394	131112580	True	NM_032357,NM_001142370,NM_014369	chr2,chr2,chr2	-,+,+	CCDC115,PTPN18,PTPN18	-11472,999,999
chr11:94706336-94706761	chr11	+	94706340	94706778	True	NM_016403,NM_018039	chr11,chr11	-,+	CWC15,KDM4D	48,66
chr9:136040725-136041854	chr9	+	136040730	136041852	True	NM_021996,NR_001275	chr9,chr9	-,+	GBGT1,CELP	-1429,-82855
chr12:50419967-50421531	chr12	+	50420008	50421249	True	NM_001126103,NM_001126104,NM_001095,NM_013277	chr12,chr12,chr12,chr12	-,-,+,-	RACGAP1,RACGAP1,ACCN2,RACGAP1	-701,-701,30237,-701
chr16:71843066-71843440	chr16	+	71843262	71843472	True	NM_001128,NM_001137675,NM_001030007	chr16,chr16,chr16	-,+,-	AP1G1,ATXN1L,AP1G1	-286,36426,-286
chr7:87563906-87564323	chr7	+	87563990	87564368	True	NM_021723,NM_021722,NM_021721,NM_018843,NM_016351,NM_004194	chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,-,+,+	ADAM22,ADAM22,ADAM22,SLC25A40,ADAM22,ADAM22	-477,-477,-477,-58298,-477,-477
chr2:101923523-101923934	chr2	+	101923547	101923651	True	NM_173647,NM_017546	chr2,chr2	-,+	RNF149,C2orf29	1577,-54260
chr8:38965694-38967679	chr8	+	38966106	38967223	True	NM_078473,NM_145004	chr8,chr8	-,+	TM2D2,ADAM32	-112065,-1108
chr22:42197327-42198638	chr22	+	42197394	42198336	True	NM_001003796,NM_024821	chr22,chr22	-,+	NHP2L1,CCDC134	-112481,-767
chr5:125783278-125784434	chr5	+	125783387	125784447	True	NM_001146322,NM_001182	chr5,chr5	+,-	GRAMD3,ALDH7A1	16339,146685
chr10:23396265-23397045	chr10	+	23396301	23396884	True	NM_012228,NM_153714	chr10,chr10	+,-	MSRB2,C10orf67	-11925,236947
chrX:114794825-114795605	chrX	+	114794875	114795619	True	NM_005032,NM_020871	chrX,chrX	+,-	PLS3,LRCH2	-46,-326240
chr6:146948787-146950313	chr6	+	146948810	146950367	True	NM_024694,NR_003954	chr6,chr6	+,-	C6orf103,LOC729176	-28737,174652
chr4:2812972-2813248	chr4	+	2813060	2813236	True	NM_001145855,NM_001145856,NM_024309,NM_003023	chr4,chr4,chr4,chr4	+,+,-,+	SH3BP2,SH3BP2,TNIP2,SH3BP2	709,6675,-54957,7304
chr19:7797167-7797531	chr19	+	7797320	7797578	True	NM_198492,NM_001144904	chr19,chr19	-,+	CLEC4G,CLEC4M	-263,30456
chr19:14682955-14684763	chr19	+	14682989	14684421	True	NM_207390,NM_004146,NM_001204118	chr19,chr19,chr19	+,-,+	CLEC17A,NDUFB7,CLEC17A	9474,-100,9474
chr1:228602539-228602853	chr1	+	228602667	228602881	True	NM_001024940,NM_175055,NM_001134855,NM_145214,NM_016102	chr1,chr1,chr1,chr1,chr1	-,+,-,-,-	TRIM17,HIST3H2BB,TRIM17,TRIM11,TRIM17	1752,42926,1752,-8150,1752
chr10:6340782-6341484	chr10	+	6340786	6341532	True	NM_004566,NM_000417	chr10,chr10	+,-	PFKFB3,IL2RA	-95997,-236453
chr19:45172298-45174221	chr19	+	45172742	45174035	True	NM_001127893,NM_020219,NR_027754	chr19,chr19,chr19	+,+,-	CEACAM19,CEACAM19,CEACAM22P	688,688,-112592
chr19:52194291-52194958	chr19	+	52194651	52194981	True	NM_001523,NR_029843,NR_029482,NR_024330,NR_029693	chr19,chr19,chr19,chr19,chr19	-,+,+,+,+	HAS1,MIR99B,MIRLET7E,NCRNA00085,MIR125A	32290,883,1057,1611,1525
chr15:65068926-65070248	chr15	+	65069079	65069904	True	NM_194272,NM_001195059	chr15,chr15	-,+	RBPMS2,PLEKHO2	-1309,64177
chr7:124568629-124569784	chr7	+	124568648	124569819	True	NR_003102,NR_003103,NM_001042594,NR_003104,NM_015450,NM_001174046	chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,+	POT1,POT1,POT1,POT1,POT1,SPAM1	268,268,268,268,268,-1002798
chr20:824862-825153	chr20	+	824894	825082	True	NM_031424,NM_207121,NM_015985	chr20,chr20,chr20	+,+,-	FAM110A,FAM110A,ANGPT4	202,-8234,71928
chr1:16816214-16816847	chr1	+	16816234	16816896	True	NR_023386,NM_018090	chr1,chr1	-,+	CROCCP3,NECAP2	2350,-49118
chr2:239135803-239136347	chr2	+	239135844	239136268	True	NR_026925,NR_026926,NR_026923	chr2,chr2,chr2	-,-,+	LOC151174,LOC151174,LOC643387	4100,4100,4058
chr13:28020324-28022201	chr13	+	28020606	28021981	True	NM_002097,NM_152912,NM_001166261,NM_001166262,NM_001166263	chr13,chr13,chr13,chr13,chr13	+,-,-,-,-	GTF3A,MTIF3,MTIF3,MTIF3,MTIF3	-21985,2816,2411,2403,2816
chr2:131851327-131851608	chr2	+	131851410	131851513	True	NM_001100623,NM_001009993	chr2,chr2	+,-	PLEKHB2,FAM168B	10906,-406
chr1:44482184-44482405	chr1	+	44482335	44482417	True	NM_152499,NM_006934,NM_201649	chr1,chr1,chr1	+,-,-	CCDC24,SLC6A9,SLC6A9	-25106,630,630
chrY:9325069-9325299	chrY	+	9325124	9325186	True	NR_001553,NM_003308	chrY,chrY	-,+	FAM197Y2P,TSPY1	-2861,-20611
chrY:9325069-9325299	chrY	+	9345407	9345469	False	NR_001553,NM_001077697	chrY,chrY	-,+	FAM197Y2P,TSPY3	17458,20019
chrY:9325069-9325299	chrY	+	9236284	9304850	False	NM_001197242,NR_001553,NM_003308	chrY,chrY,chrY	+,-,+	TSPY1,FAM197Y2P,TSPY1	-287,-23213,-287
chrY:9325069-9325299	chrY	+	9195660	9215971	False	NR_001553,NM_001164471	chrY,chrY	-,+	FAM197Y2P,TSPY4	-2869,-241
chrY:9325069-9325299	chrY	+	9175321	9175383	False	NR_001546,NM_001164471	chrY,chrY	-,+	TTTY20,TSPY4	-2880,20068
chr21:17657579-17657803	chr21	+	17657640	17657818	True	NM_003489,NR_027791	chr21,chr21	-,+	NRIP1,C21orf34	-1220514,-90998
chr12:18356321-18357329	chr12	+	18356645	18357387	True	NM_004570,NM_024730	chr12,chr12	+,-	PIK3C2G,RERGL	57086,-113531
chr2:70193352-70194430	chr2	+	70193381	70194275	True	NM_152792,NM_002357	chr2,chr2	-,+	ASPRV1,MXD1	-3984,-51259
chr16:29817383-29817588	chr16	+	29817455	29817515	True	NM_001042539,NM_145239,NM_002383,NM_006319	chr16,chr16,chr16,chr16	+,+,+,-	MAZ,PRRT2,MAZ,CDIPT	339,5893,339,57113
chr10:71028584-71028990	chr10	+	71028737	71028805	True	NM_001057,NM_033497,NM_033500,NM_033498	chr10,chr10,chr10,chr10	-,+,+,+	TACR2,HK1,HK1,HK1	147919,950,950,950
chr19:37701431-37702093	chr19	+	37701454	37701756	True	NM_152279,NM_152604	chr19,chr19	-,+	ZNF585B,ZNF383	-3,15609
chrX:107979434-107979783	chrX	+	107979516	107979754	True	NM_033380,NM_003604	chrX,chrX	+,-	COL4A5,IRS4	-296413,53
chr5:180628621-180628828	chr5	+	180628769	180628877	True	NM_203295,NM_203294,NM_203297,NM_203296,NM_033342,NM_203293,NM_033549	chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,-,-,+	TRIM7,TRIM7,TRIM7,TRIM7,TRIM7,TRIM7,TRIM41	2513,2513,-839,2513,3350,3350,21428
chr9:101724191-101725178	chr9	+	101724282	101725194	True	NM_173551,NM_001855	chr9,chr9	-,+	ANKS6,COL15A1	-165488,-18195
chr12:102092400-102093324	chr12	+	102092403	102092810	True	NM_020244,NM_001177948	chr12,chr12	+,-	CHPT1,SYCP3	-1047,40491
chr16:87904467-87904801	chr16	+	87904467	87904823	True	NM_001173539,NM_003486	chr16,chr16	+,-	BANP,SLC7A5	80214,-1367
chr6:76729860-76730874	chr6	+	76730089	76730433	True	NM_001563,NM_004999	chr6,chr6	-,+	IMPG1,MYO6	51952,-271231
chr11:64728443-64728932	chr11	+	64728522	64728621	True	NM_001037225,NM_006244	chr11,chr11	-,+	C11orf85,PPP2R5B	-913,-36430
chr12:10086128-10087848	chr12	+	10086346	10087824	True	NM_138337,NM_001130711	chr12,chr12	+,-	CLEC12A,CLEC2A	36183,-1366
chr8:42910396-42911073	chr8	+	42910395	42911121	True	NR_027669,NR_033698,NM_002027	chr8,chr8,chr8	-,+,+	RNF170,FNTA,FNTA	-158529,320,320
chr7:75041860-75043307	chr7	+	75041867	75042888	True	NR_003614,NR_033322	chr7,chr7	-,+	PMS2L2,NSUN5P1	-53652,-2294
chr7:75041860-75043307	chr7	-	72720513	72720563	False	NM_148956,NM_001168348,NM_018044,NM_001135211,NM_001168347	chr7,chr7,chr7,chr7,chr7	-,-,-,+,-	NSUN5,NSUN5,NSUN5,FKBP6,NSUN5	2351,2351,2351,21591,2351
chr7:75041860-75043307	chr7	-	72422012	72423036	False	NR_033323,NR_003602	chr7,chr7	-,+	NSUN5P2,LOC541473	2316,17155
chr2:210637381-210639298	chr2	+	210637513	210639345	True	NM_152519,NM_032504,NM_182587	chr2,chr2,chr2	-,+,+	C2orf67,UNC80,UNC80	396768,-856,-856
chr1:248124855-248126324	chr1	+	248124907	248126320	True	NM_001004491,NM_001001959	chr1,chr1	+,-	OR2AK2,OR11L1	2313,-119709
chr6:7107287-7107599	chr6	+	7107351	7107603	True	NM_001003700,NM_001003699,NM_001003698,NM_001168344,NM_003144	chr6,chr6,chr6,chr6,chr6	+,+,+,+,-	RREB1,RREB1,RREB1,RREB1,SSR1	482,482,482,226,205988
chr7:74962820-74964037	chr7	+	74963100	74963164	True	NR_003614,NR_003664	chr7,chr7	-,+	PMS2L2,SPDYE8P	25101,1395
chr7:74962820-74964037	chr7	-	72501702	72501766	False	NR_003614,NR_003664	chr7,chr7	+,-	PMS2L2,SPDYE8P	-25073,-1393
chr7:74962820-74964037	chr7	+	74935075	74935139	False	NR_003614,NR_003664	chr7,chr7	-,+	PMS2L2,SPDYE8P	53126,1393
chr3:120158932-120159423	chr3	+	120159068	120159472	True	NM_001168331,NM_007085	chr3,chr3	+,-	NDUFB4,FSTL1	155655,10496
chr12:1931040-1931240	chr12	+	1931039	1931289	True	NM_001039029,NM_001163925,NM_001163926,NM_172364	chr12,chr12,chr12,chr12	+,+,+,-	LRTM2,LRTM2,LRTM2,CACNA2D4	-1657,-1657,-1657,96631
chr7:158379776-158380231	chr7	+	158379785	158380225	True	NM_130843,NM_130842,NM_018051,NM_002847	chr7,chr7,chr7,chr7	-,-,+,-	PTPRN2,PTPRN2,WDR60,PTPRN2	307,307,269043,307
chr7:128165917-128166988	chr7	+	128166001	128166507	True	NM_183243,NM_018396	chr7,chr7	-,+	IMPDH1,METTL2B	-115965,-49279
chr7:128165917-128166988	chr17	+	60551030	60551081	False	NR_027486,NM_001112707,NM_006852	chr17,chr17,chr17	-,+,+	TBC1D3P2,TLK2,TLK2	-198014,5304,5304
chr16:34625884-34626682	chr16	+	34625950	34626683	True	NR_026980,NR_027079	chr16,chr16	-,+	LOC146481,LOC283914	88341,-28099
chr12:81110751-81111017	chr12	+	81110839	81111033	True	NM_002469,NM_005593,NR_030348	chr12,chr12,chr12	+,+,-	MYF6,MYF5,MIR617	-9482,-182,115425
chr16:46603611-46604488	chr16	+	46603631	46604344	True	NR_026556,NM_014321	chr16,chr16	-,+	ANKRD26P1,ORC6	-622,119213
chr11:46403555-46403863	chr11	+	46403632	46403868	True	NM_001012333,NM_002391,NM_001012334,NM_000741	chr11,chr11,chr11,chr11	+,+,+,-	MDK,MDK,MDK,CHRM4	-380,-464,-1065,4289
chr19:30865802-30866024	chr19	+	30865836	30866010	True	NM_014717,NM_031448	chr19,chr19	+,-	ZNF536,C19orf12	-2559,-659384
chr8:104852158-104854037	chr8	+	104852239	104853944	True	NM_014677,NM_030780	chr8,chr8	+,-	RIMS2,SLC25A32	-20874,-424771
chr9:131686619-131687449	chr9	+	131687253	131687499	True	NM_174933,NM_001100877,NM_001100876,NM_014908	chr9,chr9,chr9,chr9	+,+,+,-	PHYHD1,PHYHD1,PHYHD1,DOLK	-4130,-2742,-4130,22567
chr9:35829993-35830735	chr9	+	35830079	35830784	True	NM_001042589,NM_016446,NM_001042590,NM_001012446	chr9,chr9,chr9,chr9	+,+,+,-	TMEM8B,TMEM8B,TMEM8B,C9orf128	-901,-908,-617,-1335
chr19:48257674-48257921	chr19	+	48257683	48257749	True	NM_015710,NM_198479,NR_003048	chr19,chr19,chr19	+,-,+	GLTSCR2,TPRX1,SNORD23	-8941,49162,1360
chr16:324231-324603	chr16	+	324403	324629	True	NM_006849,NM_183337,NM_001176,NM_003834	chr16,chr16,chr16,chr16	+,-,+,-	PDIA2,RGS11,ARHGDIG,RGS11	8488,1335,5976,1335
chr16:18489789-18490388	chr16	+	18489872	18489922	True	NR_036142,NR_003569,NR_036141,NR_036144	chr16,chr16,chr16,chr16	-,+,-,-	MIR3180-2,ABCC6P1,MIR3180-1,MIR3180-3	6252,92647,6256,6256
chr16:18489789-18490388	chr16	-	16449972	16450022	False	NR_036447,NM_001079528	chr16,chr16	+,-	PKD1P1,ABCC6	-38557,-132644
chr15:94843593-94844559	chr15	+	94843785	94844459	True	NM_001159643,NM_018349,NR_034095	chr15,chr15,chr15	+,+,-	MCTP2,MCTP2,LOC400456	-2414,-2414,1025920
chr3:196014270-196014508	chr3	+	196014274	196014554	True	NM_005017,NM_152672	chr3,chr3	-,+	PCYT1A,OSTalpha	80,-70942
chr12:110840432-110840699	chr12	+	110840440	110840554	True	NM_001137664,NM_016238,NM_013300	chr12,chr12,chr12	-,-,+	ANAPC7,ANAPC7,C12orf24	1031,1031,65677
chr9:96337272-96337633	chr9	+	96337463	96337651	True	NM_198841,NM_005392	chr9,chr9	-,+	FAM120AOS,PHF2	-121589,1257
chr17:63771779-63772334	chr17	+	63772026	63772332	True	NM_002737,NM_001037325	chr17,chr17	+,-	PRKCA,CCDC46	526593,50379
chr6:165487901-165488539	chr6	+	165487952	165488539	True	NM_144980,NR_027284	chr6,chr6	-,+	C6orf118,LOC441177	234635,912499
chr22:51195712-51196812	chr22	+	51195815	51196862	True	NM_001003789,NR_026981	chr22,chr22	-,+	RABL2B,RPL23AP82	25277,-372
chrY:9163724-9164759	chrY	+	9163877	9164807	True	NR_001546,NR_001547,NM_001164471	chrY,chrY,chrY	-,-,+	TTTY20,RBMY1A3P,TSPY4	7684,-3394,30644
chr12:49350054-49350299	chr12	+	49350064	49350327	True	NM_001659,NM_005430	chr12,chr12	-,+	ARF3,WNT1	975,21908
chr10:75399753-75401167	chr10	+	75399844	75401191	True	NM_021245,NM_024875,NM_004922	chr10,chr10,chr10	-,-,+	MYOZ1,SYNPO2L,SEC24C	374,9646,102939
chr11:60194737-60196579	chr11	+	60195037	60196445	True	NM_023945,NM_022349	chr11,chr11	+,-	MS4A5,MS4A6A	616,-244363
chr11:2323217-2323728	chr11	+	2323391	2323603	True	NM_139022,NM_001142946,NR_024621	chr11,chr11,chr11	+,-,-	TSPAN32,C11orf21,C11orf21	-199,-248,-248
chr1:35497060-35497435	chr1	+	35497060	35497480	True	NM_024772,NM_007167	chr1,chr1	+,-	ZMYM1,ZMYM6	47491,139
chr2:75938257-75938757	chr2	+	75938321	75938736	True	NM_001201334,NM_001201335,NM_014763,NM_003203	chr2,chr2,chr2,chr2	-,-,+,-	C2orf3,C2orf3,MRPL19,C2orf3	-589,-210,-64463,-210
chr12:100536714-100537137	chr12	+	100536782	100536954	True	NR_031728,NM_015054,NM_001006947	chr12,chr12,chr12	+,-,-	MIR1827,UHRF1BP1L,UHRF1BP1L	46707,-140,-140
chr8:121457402-121457634	chr8	+	121457486	121457671	True	NM_022045,NM_014078	chr8,chr8	+,-	MTBP,MRPL13	-6,26
chr2:43017965-43018456	chr2	+	43018015	43018447	True	NM_020744,NM_012205	chr2,chr2	+,-	MTA3,HAAO	-222405,1354
chr9:114360236-114360662	chr9	+	114360403	114360615	True	NM_001015882,NM_012212,NM_001146109,NM_001146108	chr9,chr9,chr9,chr9	+,-,-,-	DNAJC25,PTGR1,PTGR1,PTGR1	33016,1146,1570,1570
chr17:79336646-79337483	chr17	+	79337103	79337471	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	36068,-32629
chr4:74604283-74606266	chr4	+	74604342	74606283	True	NM_000584,NM_201431	chr4,chr4	+,-	IL8,RASSF6	-61,-118002
chr12:39299362-39299574	chr12	+	39299366	39299560	True	NM_001013620,NM_153634	chr12,chr12	+,-	ALG10B,CPNE8	-588860,54
chr1:42630284-42630565	chr1	+	42630426	42630552	True	NM_007102,NM_033553	chr1,chr1	+,-	GUCA2B,GUCA2A	-11385,-31
chr7:56032965-56033315	chr7	+	56032966	56033257	True	NM_001202469,NM_001483,NM_004577	chr7,chr7,chr7	+,+,-	GBAS,GBAS,PSPH	-747,-747,86067
chrX:53115834-53117094	chrX	+	53115989	53117085	True	NM_022117,NM_014138	chrX,chrX	+,-	TSPYL2,FAM156A	-4498,-129813
chr16:85210308-85210701	chr16	+	85210324	85210688	True	NR_033984,NM_198491	chr16,chr16	+,-	LOC400548,FAM92B	-39619,-64210
chr1:205743197-205743554	chr1	+	205743261	205743529	True	NM_003929,NM_001135662,NM_001135663,NM_001135664,NM_181644	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	RAB7L1,RAB7L1,RAB7L1,RAB7L1,MFSD4	1131,1131,1131,1131,-205207
chr7:65338196-65338411	chr7	+	65338345	65338447	True	NM_000181,NM_173517	chr7,chr7	-,+	GUSB,VKORC1L1	108904,-139
chr7:65338196-65338411	chr7	+	64498788	64498838	False	NR_033416,NM_001007253	chr7,chr7	+,-	CCT6P3,ERV3	-107,-31664
chr6:53223591-53223871	chr6	+	53223760	53223910	True	NM_012347,NM_021814	chr6,chr6	+,-	FBXO9,ELOVL5	-288040,-9818
chr8:145655271-145656237	chr8	+	145655340	145656230	True	NM_145754,NM_183057,NM_016208	chr8,chr8,chr8	+,-,-	KIFC2,VPS28,VPS28	35507,-1413,-1413
chr10:91382448-91383927	chr10	+	91382771	91383951	True	NM_016195,NM_138316	chr10,chr10	+,-	KIF20B,PANK1	77415,19747
chr22:47159091-47160099	chr22	+	47159193	47160146	True	NM_022766,NM_014346	chr22,chr22	-,+	CERK,TBC1D22A	-25041,-727
chr1:38095267-38095802	chr1	+	38095520	38095756	True	NM_001038633,NM_018101	chr1,chr1	-,+	RSPO1,CDCA8	4791,62402
chr19:19045876-19046503	chr19	+	19046247	19046493	True	NM_004838,NR_027297,NM_001145722,NM_001145721,NR_033677,NM_001145724	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,+,-	HOMER3,HOMER3,HOMER3,HOMER3,DDX49,HOMER3	5604,4007,4676,4724,-15823,3421
chr1:242011902-242012725	chr1	+	242011934	242012702	True	NM_006027,NM_001004343,NM_130398,NM_003686	chr1,chr1,chr1,chr1	+,-,+,+	EXO1,MAP1LC3C,EXO1,EXO1	-32,149733,-492,-32
chr16:67530766-67531173	chr16	+	67530789	67531213	True	NM_001138,NM_024519	chr16,chr16	-,+	AGRP,FAM65A	-13073,31503
chr13:107190790-107192383	chr13	+	107191320	107192356	True	NM_004093,NR_034119	chr13,chr13	-,+	EFNB2,LOC728192	-3932,-162461
chr20:22568117-22568837	chr20	+	22568183	22568728	True	NM_021784,NM_153675,NR_001558,NM_001052	chr20,chr20,chr20,chr20	-,-,-,+	FOXA2,FOXA2,NCRNA00261,SSTR4	-3082,-2082,-8903,447328
chr6:109170259-109172072	chr6	+	109170380	109171984	True	NM_001199934,NM_032131	chr6,chr6	-,+	SESN1,ARMC2	158257,-820
chr5:114600867-114601087	chr5	+	114600873	114601083	True	NM_005023,NM_001284	chr5,chr5	-,+	PGGT1B,AP3S1	-2304,576535
chr2:54378171-54379467	chr2	+	54378171	54379147	True	NM_001003937,NM_138448	chr2,chr2	-,+	TSPYL6,ACYP2	104312,-35816
chr7:38730083-38731385	chr7	+	38730131	38731185	True	NR_028347,NM_001166018	chr7,chr7	-,+	FAM183B,POU6F2	-3442,286423
chr11:18129618-18130343	chr11	+	18129693	18130100	True	NR_026576,NM_138421,NM_054031	chr11,chr11,chr11	-,-,+	SAA3P,SAAL1,MRGPRX3	7629,-2055,12401
chr17:3372249-3373066	chr17	+	3372564	3373042	True	NM_001170696,NM_001170697,NM_001170695,NM_001170698,NM_001170699,NM_000049,NM_032598,NM_001128085	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,+,-,+	SPATA22,SPATA22,SPATA22,SPATA22,SPATA22,ASPA,SPATA22,ASPA	2150,2134,2150,2107,2075,6253,2049,4361
chrX:107981146-107982558	chrX	+	107981236	107982340	True	NM_033380,NM_003604	chrX,chrX	+,-	COL4A5,IRS4	-298139,-1629
chr15:77713111-77713454	chr15	+	77713117	77713271	True	NM_018200,NM_024776	chr15,chr15	+,-	HMG20A,PEAK1	-5,-135784
chr4:125590490-125590909	chr4	+	125590646	125590931	True	NM_020337,NM_024582	chr4,chr4	-,+	ANKRD50,FAT4	43007,646635
chr18:12948262-12948482	chr18	+	12948402	12948494	True	NM_031216,NM_001013437,NM_002828	chr18,chr18,chr18	+,+,-	SEH1L,SEH1L,PTPN2	-470,-470,-64068
chr17:38475178-38475563	chr17	+	38475309	38475539	True	NM_000964,NM_001145301,NM_001145302,NM_152219	chr17,chr17,chr17,chr17	+,+,+,-	RARA,RARA,RARA,GJD3	-9937,-887,-887,45456
chr20:31989987-31990554	chr20	+	31990004	31990471	True	NM_016408,NM_001032999,NM_016082	chr20,chr20,chr20	-,+,-	CDK5RAP1,CBFA2T2,CDK5RAP1	-667,87456,-667
chr1:111990781-111991204	chr1	+	111990870	111991180	True	NM_001688,NM_024102	chr1,chr1	+,-	ATP5F1,WDR77	562,700
chr16:67563553-67563949	chr16	+	67563615	67563941	True	NM_001138,NM_001193524,NM_001193523,NM_001193522,NM_024519	chr16,chr16,chr16,chr16,chr16	-,+,+,+,+	AGRP,FAM65A,FAM65A,FAM65A,FAM65A	-45899,7423,-126,-946,-949
chr1:201441760-201442105	chr1	+	201441801	201441989	True	NM_012396,NR_026667	chr1,chr1	-,+	PHLDA3,RPS10P7	-3502,47042
chr19:41699317-41699538	chr19	+	41699385	41699555	True	NM_030622,NM_000660	chr19,chr19	+,-	CYP2S1,TGFB1	-321,160326
chr6:110737051-110738547	chr6	+	110737149	110738547	True	NM_004032,NM_003649,NM_015891	chr6,chr6,chr6	-,-,+	DDO,DDO,CDC40	-396,-396,-235577
chr3:133382151-133382611	chr3	+	133382394	133382504	True	NM_001063,NM_007027	chr3,chr3	+,-	TF,TOPBP1	82472,-1657
chr11:35165797-35166163	chr11	+	35165818	35166172	True	NM_001001390,NM_001001391,NM_001001392,NM_000610,NM_001202555,NM_001202557,NM_001202556,NM_015957,NM_001001389	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,+,+,-,+	CD44,CD44,CD44,CD44,CD44,CD44,CD44,APIP,CD44	-5452,-5452,-5452,-5452,-5452,-5452,-5452,-227879,-5452
chr9:124926254-124927112	chr9	+	124926319	124927149	True	NM_198469,NM_014222	chr9,chr9	+,-	MORN5,NDUFA8	-4193,-4221
chr2:68287666-68289527	chr2	+	68287934	68289575	True	NM_001190265,NM_173177,NM_006333,NM_001190263,NM_020143	chr2,chr2,chr2,chr2,chr2	-,-,-,-,+	C1D,C1D,C1D,C1D,PNO1	641,641,641,641,95429
chr10:42970783-42971157	chr10	+	42970812	42971006	True	NR_026777,NR_026827	chr10,chr10	-,+	ZNF37BP,LOC84856	77324,-12
chr6:133033379-133034196	chr6	+	133033608	133033896	True	NM_004666,NM_001016	chr6,chr6	-,+	VNN1,RPS12	1348,101811
chr1:227483067-227484126	chr1	+	227483217	227483960	True	NM_178549,NM_003607	chr1,chr1	+,-	ZNF678,CDC42BPA	267259,21917
chr20:2360685-2361151	chr20	+	2360725	2361183	True	NR_003684,NM_198994	chr20,chr20	-,+	SNORD119,TGM6	82560,370
chr21:43825355-43825838	chr21	+	43825436	43825867	True	NM_018961,NM_024022,NM_032405,NM_001001895	chr21,chr21,chr21,chr21	+,-,-,+	UBASH3A,TMPRSS3,TMPRSS3,UBASH3A	-1468,-9236,-9236,-1468
chr3:171526248-171526465	chr3	+	171526349	171526475	True	NM_001130081,NM_002662,NM_001164436	chr3,chr3,chr3	-,-,+	PLD1,PLD1,TMEM212	1849,1849,34663
chr19:38149886-38151004	chr19	+	38150062	38150885	True	NM_001172226,NM_014898	chr19,chr19	+,-	ZNF540,ZFP30	-64388,-3749
chr12:100537265-100537982	chr12	+	100537281	100537745	True	NR_031728,NM_015054,NM_001006947	chr12,chr12,chr12	+,-,-	MIR1827,UHRF1BP1L,UHRF1BP1L	45916,-639,-639
chr3:124457039-124459008	chr3	+	124457157	124458644	True	NM_002213,NR_033437,NR_033434,NM_000373	chr3,chr3,chr3,chr3	-,+,+,+	ITGB5,UMPS,UMPS,UMPS	147555,-7995,-7995,-7995
chr3:53381986-53382513	chr3	+	53382022	53382220	True	NM_018403,NM_000720	chr3,chr3	-,+	DCP1A,CACNA1D	-368,146810
chr1:21504360-21505622	chr1	+	21504636	21505461	True	NM_001198801,NM_001198803,NM_001198802,NM_032264	chr1,chr1,chr1,chr1	-,-,-,+	EIF4G3,EIF4G3,EIF4G3,NBPF3	-1255,-3385,-1255,261169
chr16:56995793-56996102	chr16	+	56995821	56996033	True	NM_000078,NM_024946	chr16,chr16	+,-	CETP,FAM192A	-37,223993
chrX:19503573-19504431	chrX	+	19503598	19504318	True	NM_001173456,NM_001001671	chrX,chrX	+,-	PDHA1,MAP3K15	-141646,29111
chr1:26147180-26147743	chr1	+	26147242	26147708	True	NM_019557,NR_024498,NM_001099625,NM_001099627,NM_001099626	chr1,chr1,chr1,chr1,chr1	+,-,+,+,+	FAM54B,LOC646471,FAM54B,FAM54B,FAM54B	-609,2441,-896,-896,26
chr5:43311302-43313289	chr5	+	43311635	43313208	True	NM_153361,NM_002130,NM_001098272	chr5,chr5,chr5	+,-,-	MGC42105,HMGCS1,HMGCS1	-119370,437,437
chr17:62102340-62102968	chr17	+	62102352	62102942	True	NM_001099788,NM_001099789,NM_001099786,NM_001099787,NM_001191031	chr17,chr17,chr17,chr17,chr17	-,-,-,-,+	ICAM2,ICAM2,ICAM2,ICAM2,C17orf72	-4358,-4358,-4358,-4358,-26699
chr15:40524938-40526046	chr15	+	40524955	40526009	True	NM_020168,NM_001039905	chr15,chr15	+,-	PAK6,C15orf56	6025,19151
chr9:115912029-115913092	chr9	+	115912473	115913054	True	NM_001860,NR_024376	chr9,chr9	+,-	SLC31A2,NCRNA00256B	183,-38516
chr5:176943460-176943706	chr5	+	176943461	176943647	True	NM_001144875,NM_001174102,NM_024872,NM_001144876,NM_016222	chr5,chr5,chr5,chr5,chr5	-,+,-,-,-	DOK3,PRR7,DOK3,DOK3,DDX41	-6034,-68186,-6603,-6034,370
chr10:48354558-48354795	chr10	+	48354699	48354791	True	NM_002900,NM_153034	chr10,chr10	-,+	RBP3,ZNF488	36250,297
chr8:130947404-130949043	chr8	+	130947653	130948862	True	NM_016623,NR_031613	chr8,chr8	-,+	FAM49B,MIR1208	3205,-1785343
chr10:17495158-17495484	chr10	+	17495185	17495483	True	NM_001004470,NR_034129	chr10,chr10	-,+	ST8SIA6,LOC100128098	821,-66301
chr14:103016027-103017556	chr14	+	103016675	103017576	True	NM_152326,NR_036192	chr14,chr14	-,+	ANKRD9,MIR4309	-40547,-10745
chr11:67887233-67887549	chr11	+	67887245	67887370	True	NM_001277,NM_212469,NM_006053	chr11,chr11,chr11	-,-,+	CHKA,CHKA,TCIRG1	1547,1547,-76856
chr17:47020693-47021518	chr17	+	47020996	47021376	True	NM_023079,NM_007241	chr17,chr17	+,-	UBE2Z,SNF8	-35323,828
chr3:132040342-132040774	chr3	+	132040362	132040813	True	NM_001099,NM_001134194,NM_130808	chr3,chr3,chr3	+,+,-	ACPP,ACPP,CPNE4	-4202,-4202,-286518
chrX:67717454-67718470	chrX	+	67717483	67718505	True	NM_173834,NM_002547,NM_001195214	chrX,chrX,chrX	+,-,+	YIPF6,OPHN1,YIPF6	118,-64184,118
chr9:94115409-94115974	chr9	+	94115655	94115800	True	NM_001698,NR_037472	chr9,chr9	-,+	AUH,MIR3910-1	8463,282732
chr14:23355420-23355773	chr14	+	23355428	23355742	True	NM_001077351,NM_173527	chr14,chr14	-,+	RBM23,REM2	32704,-3047
chr16:19179170-19179448	chr16	+	19179221	19179315	True	NM_016524,NM_015092	chr16,chr16	+,-	SYT17,SMG1	322,-241495
chr14:37692444-37692866	chr14	+	37692591	37692681	True	NM_138731,NM_030631	chr14,chr14	+,-	MIPOL1,SLC25A21	-25530,-50726
chr1:219651813-219652471	chr1	+	219652047	219652360	True	NM_138794,NM_018713	chr1,chr1	+,-	LYPLAL1,SLC30A10	-304907,449684
chrX:134970893-134971441	chrX	+	134971191	134971415	True	NM_001017438,NM_018666	chrX,chrX	-,+	CT45A6,SAGE1	53,4369
chrX:134970893-134971441	chrX	-	134847043	134847336	False	NM_001017417,NM_001017436	chrX,chrX	+,-	CT45A1,CT45A4	-152,89692
chr19:42636390-42636637	chr19	+	42636395	42636675	True	NM_022752,NM_002698,NR_036208	chr19,chr19,chr19	+,-,-	ZNF574,POU2F2,MIR4323	-56156,5,1040
chr19:49661511-49662187	chr19	+	49661632	49662114	True	NM_001195227,NM_017636,NM_002152	chr19,chr19,chr19	+,+,-	TRPM4,TRPM4,HRC	-667,-667,-2951
chr20:42874758-42875808	chr20	+	42874851	42875571	True	NM_024034,NM_016470	chr20,chr20	+,-	GDAP1L1,C20orf111	336,-35420
chr7:97598603-97599781	chr7	+	97598835	97599547	True	NR_002822,NM_014916	chr7,chr7	-,+	MGC72080,LMTK2	2147,136649
chr7:77047419-77047624	chr7	+	77047419	77047657	True	NM_002835,NM_017439	chr7,chr7	+,-	PTPN12,PION	119115,-1702
chr16:81070730-81071020	chr16	+	81070731	81071055	True	NM_020188,NM_015251	chr16,chr16	-,+	C16orf61,ATMIN	-30229,-1325
chr8:33368053-33368854	chr8	+	33368229	33368905	True	NM_001102401,NM_025115,NM_032509	chr8,chr8,chr8	-,-,+	C8orf41,C8orf41,MAK16	1852,1805,-25607
chr9:123548155-123548791	chr9	+	123548337	123548727	True	NR_027442,NM_012164	chr9,chr9	+,-	LOC100288842,FBXW2	7047,7063
chr20:61272662-61273160	chr20	+	61272746	61273064	True	NM_016354,NR_024470	chr20,chr20	+,-	SLCO4A1,LOC100127888	732,24959
chr21:34155726-34156923	chr21	+	34156317	34156736	True	NM_013329,NR_024623	chr21,chr21	-,+	GCFC1,C21orf49	-12148,-11967
chr20:45183538-45184971	chr20	+	45183641	45185005	True	NM_030777,NM_080721	chr20,chr20	+,-	SLC2A10,C20orf123	153273,-4428
chr9:32783613-32783821	chr9	+	32783613	32783817	True	NM_212558,NM_153809	chr9,chr9	+,-	TMEM215,TAF1L	-167,-147946
chr12:112854983-112855354	chr12	+	112855151	112855351	True	NM_002834,NM_000970,NM_001024662	chr12,chr12,chr12	+,-,-	PTPN11,RPL6,RPL6	1184,-7708,-7708
chr4:1792748-1794041	chr4	+	1792894	1794023	True	NM_012318,NM_000142,NM_001163213,NM_022965	chr4,chr4,chr4,chr4	-,+,+,+	LETM1,FGFR3,FGFR3,FGFR3	64001,1015,1015,1015
chr7:99037085-99038871	chr7	+	99037209	99038449	True	NM_015545,NM_006693,NM_001081559	chr7,chr7,chr7	-,+,+	PTCD1,CPSF4,CPSF4	-747,-703,-703
chr1:46202637-46204232	chr1	+	46202796	46204170	True	NM_001145349,NM_016486	chr1,chr1	-,+	IPP,TMEM69	12372,-49009
chr19:58279993-58280577	chr19	+	58280222	58280306	True	NM_017652,NM_001077426,NM_001204814,NM_024833	chr19,chr19,chr19,chr19	+,+,+,-	ZNF586,ZNF586,ZNF586,ZNF671	713,713,713,-41227
chr5:31533310-31534395	chr5	+	31533426	31534414	True	NM_018356,NM_013235,NM_001100412	chr5,chr5,chr5	+,-,-	C5orf22,DROSHA,DROSHA	-1113,-1144,-1144
chr1:174129338-174129544	chr1	+	174129423	174129513	True	NM_172071,NM_014857	chr1,chr1	-,+	RC3H1,RABGAP1L	-167213,-840
chr2:106466364-106467585	chr2	+	106466377	106467447	True	NM_025076,NM_001004720	chr2,chr2	-,+	UXS1,NCK2	343398,756
chr17:17991412-17992610	chr17	+	17991607	17992441	True	NM_145691,NM_001388	chr17,chr17	-,+	ATPAF2,DRG2	-49127,-375
chr14:23352622-23352947	chr14	+	23352678	23352740	True	NM_001077351,NM_173527	chr14,chr14	-,+	RBM23,REM2	35706,-297
chr1:27500558-27501414	chr1	+	27500631	27500873	True	NM_015023,NM_003047	chr1,chr1	+,-	WDTC1,SLC9A1	60133,-19180
chr1:57123270-57124503	chr1	+	57123569	57124221	True	NM_003713,NM_006252	chr1,chr1	-,+	PPAP2B,PRKAA2	-78312,-12636
chr9:2288547-2288761	chr9	+	2288561	2288804	True	NM_139045,NR_015375	chr9,chr9	+,-	SMARCA2,FLJ35024	-273277,333620
chr20:29958778-29960074	chr20	+	29958849	29960081	True	NM_153289,NM_054112	chr20,chr20	-,+	DEFB119,DEFB118	18375,-2492
chr19:37566616-37567895	chr19	+	37566761	37567907	True	NM_144689,NM_199126	chr19,chr19	+,-	ZNF420,ZNF585A	1474,95483
chr7:150927551-150929190	chr7	+	150927813	150929233	True	NM_007189,NM_005692,NR_030407,NM_019015	chr7,chr7,chr7,chr7	-,-,+,+	ABCF2,ABCF2,MIR671,CHPF2	-3496,-3496,6273,351
chr6:133131506-133131882	chr6	+	133131539	133131913	True	NM_052831,NR_002436,NR_002435,NM_001016,NR_002434	chr6,chr6,chr6,chr6,chr6	-,+,+,+,+	C6orf192,SNORA33,SNORD100,RPS12,SNORD101	-11792,6444,6027,3794,4532
chr8:37888307-37888762	chr8	+	37888306	37888732	True	NM_000025,NM_004095	chr8,chr8	-,+	ADRB3,EIF4EBP1	-64122,-337
chr21:38070722-38070931	chr21	+	38070802	38070868	True	NM_001146077,NM_005069,NM_009586	chr21,chr21,chr21	-,+,+	CLDN14,SIM2,SIM2	-121935,1122,1122
chr4:176710820-176711736	chr4	+	176710901	176711583	True	NM_170710,NM_201591	chr4,chr4	+,-	WDR17,GPM6A	275401,22649
chr19:58695032-58696204	chr19	+	58695143	58696182	True	NM_024620,NM_016325,NM_133502,NM_016324	chr19,chr19,chr19,chr19	-,+,+,+	ZNF329,ZNF274,ZNF274,ZNF274	-32995,-798,-798,-798
chr15:34609758-34610783	chr15	+	34609937	34610823	True	NM_175741,NM_005135	chr15,chr15	+,-	C15orf55,SLC12A6	27242,248
chr15:52264494-52264740	chr15	+	52264603	52264665	True	NM_138792,NM_002748	chr15,chr15	-,+	LEO1,MAPK6	-645,46745
chr10:75910543-75911111	chr10	+	75910609	75910929	True	NM_001202450,NM_012095,NM_207012,NM_006721	chr10,chr10,chr10,chr10	+,-,-,+	ADK,AP3M1,AP3M1,ADK	13,-29,-29,13
chr4:178364669-178365560	chr4	+	178364781	178365365	True	NR_033655,NM_000027,NM_018248,NM_001171988	chr4,chr4,chr4,chr4	-,-,+,-	AGA,AGA,NEIL3,AGA	-1124,-1124,-133848,-1124
chr14:55221805-55222057	chr14	+	55221811	55222031	True	NR_036194,NM_001161577	chr14,chr14	-,+	MIR4308,SAMD4A	122930,-363
chr20:31592071-31592659	chr20	+	31592233	31592676	True	NM_025227,NM_080675	chr20,chr20	+,-	BPIL1,SUN5	2730,6
chrX:102470340-102470544	chrX	+	102470353	102470587	True	NM_001080425,NM_001127688,NM_001006684	chrX,chrX,chrX	+,+,-	BEX4,BEX4,TCEAL8	-384,-384,39584
chr11:76811971-76812594	chr11	+	76812116	76812530	True	NM_182833,NM_006189	chr11,chr11	-,+	GDPD4,OMP	185983,1355
chr5:68790105-68792016	chr5	+	68790444	68791557	True	NM_002538,NM_001205255,NM_001205254,NM_001015892	chr5,chr5,chr5,chr5	+,+,+,-	OCLN,OCLN,OCLN,TAF9	-2376,8446,-1905,-124604
chr20:39995460-39995807	chr20	+	39995567	39995807	True	NM_022896,NM_052846	chr20,chr20	+,-	LPIN3,EMILIN3	-26058,-69
chr22:38989364-38989762	chr22	+	38989589	38989665	True	NM_001002880,NM_007068	chr22,chr22	+,-	CBY1,DMC1	62992,-23400
chr1:231664062-231664379	chr1	+	231664152	231664428	True	NR_028393,NR_028394,NR_028395,NR_028396,NR_028397,NR_028398,NR_028399,NR_033826,NM_005999,NR_028400	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,+,+,-,+,+	TSNAX-DISC1,TSNAX-DISC1,TSNAX-DISC1,TSNAX-DISC1,TSNAX-DISC1,TSNAX-DISC1,TSNAX-DISC1,SNRPD2P2,TSNAX,TSNAX-DISC1	-30,-30,-30,-30,-30,-30,-30,-51881,-30,-30
chr1:196884687-196885058	chr1	+	196884890	196885106	True	NM_001994,NM_006684,NM_005666	chr1,chr1,chr1	-,+,+	F13B,CFHR4,CFHR2	151348,-27814,27827
chr5:131394802-131395105	chr5	+	131394860	131395086	True	NM_000588,NM_001205250	chr5,chr5	+,-	IL3,ACSL6	1260,-47099
chr11:18157403-18159366	chr11	+	18157589	18159307	True	NR_026576,NM_054031	chr11,chr11	-,+	SAA3P,MRGPRX3	-19910,-15139
chr13:95365683-95365910	chr13	+	95365861	95365925	True	NM_180989,NM_007084	chr13,chr13	+,-	GPR180,SOX21	-111808,-1472
chr21:46822822-46824051	chr21	+	46822829	46823740	True	NM_130445,NR_028082	chr21,chr21	+,-	COL18A1,NCRNA00175	1356,21274
chr10:52834679-52835116	chr10	+	52834829	52835129	True	NM_006258,NM_138933	chr10,chr10	+,-	PRKG1,A1CF	-646,-189394
chr22:45809911-45810822	chr22	+	45810026	45810834	True	NM_015653,NM_148674	chr22,chr22	+,-	RIBC2,SMC1B	-503,-526
chr13:114900159-114901268	chr13	+	114900243	114901218	True	NM_001078645	chr13	+	CDC16	99143
chr2:219188162-219188510	chr2	+	219188260	219188460	True	NM_022572,NM_022152	chr2,chr2	+,-	PNKD,TMBIM1	-409,-30980
chr8:11927530-11929151	chr8	+	11927619	11929173	True	NM_001195257,NM_001037804,NM_001039615	chr8,chr8,chr8	-,-,+	LOC100133267,DEFB130,ZNF705D	133,133,17673
chr8:11927530-11929151	chr8	+	12174189	12175742	False	NM_001195257,NM_001037804,NR_026789	chr8,chr8,chr8	-,-,+	LOC100133267,DEFB130,FAM66A	133,133,43785
chr11:130650555-130652009	chr11	+	130650621	130652009	True	NM_139055,NM_014758	chr11,chr11	+,-	ADAMTS15,SNX19	-331803,134423
chr16:30995625-30995863	chr16	+	30995785	30995861	True	NM_001142778,NM_025193,NM_052874,NM_001142777	chr16,chr16,chr16,chr16	+,+,-,+	HSD3B7,HSD3B7,STX1B,HSD3B7	657,657,26018,657
chr3:48599916-48600284	chr3	+	48599954	48600126	True	NM_033629,NM_004567,NM_033199	chr3,chr3,chr3	+,-,-	TREX1,PFKFB4,UCN2	-92776,-5727,1125
chr2:64242659-64243901	chr2	+	64242771	64243580	True	NM_006759,NM_016516,NM_001005739	chr2,chr2,chr2	+,-,-	UGP2,VPS54,VPS54	-173808,2697,2697
chr12:53470999-53472748	chr12	+	53471002	53472695	True	NM_002178,NM_032840	chr12,chr12	+,-	IGFBP6,SPRYD3	18740,560
chr2:135813699-135815122	chr2	+	135814106	135814759	True	NM_025052,NM_012233,NM_001172435	chr2,chr2,chr2	-,+,+	YSK4,RAB3GAP1,RAB3GAP1	-31858,-4332,-4332
chr2:165476300-165477475	chr2	+	165476390	165477470	True	NM_001040142,NM_004490	chr2,chr2	+,-	SCN2A,GRB14	618441,940
chr5:140240607-140240840	chr5	+	140240688	140240835	True	NM_031861,NM_031860,NM_002109,NM_031859,NM_018902,NM_018901	chr5,chr5,chr5,chr5,chr5,chr5	+,+,-,+,+,+	PCDHA11,PCDHA10,HARS,PCDHA10,PCDHA11,PCDHA10	6995,-5107,-169717,-5107,6995,-5107
chr4:39979709-39981005	chr4	+	39979824	39980781	True	NM_001100399,NM_001100400,NM_018177	chr4,chr4,chr4	-,-,+	PDS5A,PDS5A,N4BP2	-248,-248,77742
chr1:223741029-223741513	chr1	+	223741210	223741432	True	NM_001146068,NM_001143962	chr1,chr1	+,-	CAPN2,CAPN8	147862,112054
chr1:223741029-223741513	chr9	+	138940813	138940925	False	NM_015597,NM_144653	chr9,chr9	+,-	GPSM1,NACC2	281006,46256
chr14:101360706-101362179	chr14	+	101360869	101362023	True	NR_029699,NR_024149,NM_001134888	chr14,chr14,chr14	+,+,-	MIR136,MEG8,RTL1	-9881,-114,-9685
chr1:206781950-206783026	chr1	+	206782077	206783036	True	NM_006893,NM_001201478,NM_001004023	chr1,chr1,chr1	-,-,+	EIF2D,EIF2D,DYRK3	2919,2919,25844
chr16:77231520-77232111	chr16	+	77231597	77232149	True	NM_001129979,NM_014940,NM_199355	chr16,chr16,chr16	+,+,-	SYCE1L,MON1B,ADAMTS18	1199,-6825,236912
chr2:54785556-54785793	chr2	+	54785560	54785770	True	NM_178313,NM_001003937	chr2,chr2	+,-	SPTBN1,TSPYL6	-80,-302151
chr2:111121022-111121303	chr2	+	111121034	111121306	True	NR_037626,NR_027244	chr2,chr2	+,-	LOC100507334,LOC151009	-117870,20857
chr2:111121022-111121303	chr2	-	110765238	110765510	False	NR_037627,NR_036225	chr2,chr2	+,-	LOC100288570,MIR4267	-60022,62159
chr7:73276910-73278013	chr7	+	73277300	73278056	True	NM_152559,NM_182504	chr7,chr7	-,+	WBSCR27,WBSCR28	-20445,-1869
chr3:183747030-183748281	chr3	+	183747159	183747349	True	NM_182537,NM_001023587,NM_001145143,NM_001163646	chr3,chr3,chr3,chr3	+,-,+,+	HTR3D,ABCC5,HTR3D,HTR3D	1982,-11432,2180,3269
chr1:16692911-16693477	chr1	+	16693150	16693521	True	NM_018994,NM_015609,NM_001114600	chr1,chr1,chr1	-,+,+	FBXO42,C1orf144,C1orf144	-14202,61,61
chr11:28136291-28136896	chr11	+	28136353	28136621	True	NM_031217,NM_152636,NM_001113528	chr11,chr11,chr11	-,+,+	KIF18A,METTL15,METTL15	-6607,-6608,-6608
chr12:4484523-4484724	chr12	+	4484536	4484703	True	NM_020638,NM_020375	chr12,chr12	-,+	FGF23,C12orf5	4242,-54228
chr1:223313979-223315764	chr1	+	223314181	223315656	True	NM_003268,NM_152610	chr1,chr1	-,+	TLR5,C1orf65	1019,251058
chr2:25565409-25566274	chr2	+	25565657	25566311	True	NM_014971,NM_175630,NM_175629,NM_022552	chr2,chr2,chr2,chr2	+,-,-,-	EFR3B,DNMT3A,DNMT3A,DNMT3A	-300735,-198,-198,-883
chr10:134259509-134259846	chr10	+	134259514	134259872	True	NM_173541,NM_173575	chr10,chr10	+,-	C10orf91,STK32C	-851,-138037
chr17:10406722-10407110	chr17	+	10406872	10407152	True	NM_005963,NM_020233	chr17,chr17	-,+	MYH1,C17orf48	14763,193774
chr17:58468433-58469113	chr17	+	58468448	58469092	True	NM_181707,NM_032582	chr17,chr17	+,-	C17orf64,USP32	30772,544
chr7:100861941-100862798	chr7	+	100862011	100862309	True	NM_001084,NM_006349	chr7,chr7	-,+	PLOD3,ZNHIT1	-1000,-1084
chr7:559926-560224	chr7	+	560075	560238	True	NM_002607,NR_033963,NM_033023	chr7,chr7,chr7	-,+,-	PDGFA,FLJ44511,PDGFA	-594,-98,-594
chr1:180121900-180123605	chr1	+	180121942	180123640	True	NM_001004128,NR_037642,NM_002826	chr1,chr1,chr1	+,-,+	QSOX1,LOC100527964,QSOX1	327,120226,327
chr19:39759411-39760267	chr19	+	39759457	39760229	True	NM_172139,NM_172138	chr19,chr19	-,+	IL28B,IL28A	-23846,-351
chr19:39759411-39760267	chr19	-	39735418	39735468	False	NM_172139,NM_172138	chr19,chr19	-,+	IL28B,IL28A	193,23688
chr1:13008746-13009851	chr1	+	13009475	13009607	True	NM_001100631,NM_001010889	chr1,chr1	+,-	PRAMEF22,PRAMEF6	25935,-2069
chr1:13008746-13009851	chr1	+	13119806	13119902	False	NM_001100631,NM_001013407	chr1,chr1	+,-	PRAMEF22,PRAMEF5	-84315,-2055
chr1:13008746-13009851	chr1	-	13357667	13357763	False	NM_001013692,NM_001010889,NM_001013407	chr1,chr1,chr1	-,+,+	PRAMEF3,PRAMEF6,PRAMEF5	-25975,2069,2055
chr11:59277049-59277958	chr11	+	59277505	59277734	True	NM_001004711,NR_036120,NM_001004706	chr11,chr11,chr11	+,-,+	OR4D9,MIR3162,OR4D11	4651,84962,-6508
chr11:67890581-67890952	chr11	+	67890692	67890826	True	NM_001277,NM_212469,NM_006053	chr11,chr11,chr11	-,-,+	CHKA,CHKA,TCIRG1	-1834,-1834,-80296
chr1:900951-901548	chr1	+	900968	901590	True	NM_015658,NM_198317,NM_001160184,NM_032129	chr1,chr1,chr1,chr1	-,+,+,+	NOC2L,KLHL17,PLEKHN1,PLEKHN1	-6289,-5052,286,286
chr8:61584609-61586609	chr8	+	61584713	61586463	True	NR_034003,NM_017780	chr8,chr8	-,+	LOC100130298,CHD7	293894,4875
chr12:39972198-39973018	chr12	+	39972292	39972736	True	NM_001031748,NM_005164	chr12,chr12	+,-	C12orf40,ABCD2	47235,41168
chr5:75696997-75698058	chr5	+	75697027	75697753	True	NM_006633,NM_004101	chr5,chr5	+,-	IQGAP2,F2RL2	1395,221537
chr3:161145678-161147220	chr3	+	161145682	161146822	True	NM_001080440,NM_001040100	chr3,chr3	+,-	OTOL1,C3orf57	67773,-55811
chr2:242499271-242499570	chr2	+	242499323	242499603	True	NR_033346,NM_032515	chr2,chr2	-,+	BOK-AS1,BOK	-765,-1182
chr8:22139752-22140654	chr8	+	22139989	22140587	True	NM_001135721,NM_018068,NR_029714	chr8,chr8,chr8	+,+,-	PIWIL2,PIWIL2,MIR320A	-6960,-7230,-37433
chr19:57746652-57748445	chr19	+	57746896	57748349	True	NM_001012729,NM_001145078,NM_001023563,NM_001015878,NM_001015879,NM_003160	chr19,chr19,chr19,chr19,chr19,chr19	-,+,+,+,+,+	DUXA,ZNF805,ZNF805,AURKC,AURKC,AURKC	-68040,3703,3703,-4533,-4584,-4584
chr10:96300256-96301949	chr10	+	96300368	96301117	True	NM_022451,NM_018063	chr10,chr10	-,+	NOC3L,HELLS	-177685,4456
chr15:27118898-27120095	chr15	+	27119249	27120051	True	NM_001165037,NM_000810,NM_021912	chr15,chr15,chr15	+,+,-	GABRA5,GABRA5,GABRB3	-7034,-7441,-100314
chr2:25141062-25141457	chr2	+	25141073	25141449	True	NR_034113,NM_004036	chr2,chr2	+,-	LOC729723,ADCY3	53531,656
chr3:141213301-141214929	chr3	+	141213776	141214922	True	NM_006506,NM_001178140	chr3,chr3	+,-	RASA2,TFDP2	-7912,504359
chr4:56720332-56720717	chr4	+	56720391	56720773	True	NM_178237,NM_006681,NM_001024924,NM_018261	chr4,chr4,chr4,chr4	+,-,+,+	EXOC1,NMU,EXOC1,EXOC1	-646,-217926,-646,-646
chrX:99984573-99985160	chrX	+	99984608	99985211	True	NM_080737,NM_014467,NM_001129896,NM_001174068	chrX,chrX,chrX,chrX	-,+,-,-	SYTL4,SRPX2,SYTL4,SYTL4	1368,-85496,1981,1368
chr19:58066727-58067683	chr19	+	58067057	58067629	True	NM_001039654,NM_001010879,NM_153263	chr19,chr19,chr19	-,+,+	ZNF550,ZIK1,ZNF549	146,27998,-28415
chr11:614157-614782	chr11	+	614249	614809	True	NM_004029,NM_004031,NM_000797,NM_001572	chr11,chr11,chr11,chr11	-,-,+,-	IRF7,IRF7,DRD4,IRF7	1240,969,22495,1240
chr9:115872477-115872979	chr9	+	115872552	115872670	True	NR_024376,NR_024366	chr9,chr9	-,+	NCRNA00256B,NCRNA00256A	1349,2505
chr9:115872477-115872979	chr9	-	115876462	115876580	False	NR_024376,NR_024366	chr9,chr9	-,+	NCRNA00256B,NCRNA00256A	-2505,-1349
chr12:42726562-42727375	chr12	+	42726775	42727200	True	NM_016488,NM_001143789,NM_201515,NM_201439,NM_201438,NM_001143788,NM_033114,NM_001143787,NM_201440	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,+,+,+,+,-,+,+	PPHLN1,PPHLN1,PPHLN1,PPHLN1,PPHLN1,PPHLN1,ZCRB1,PPHLN1,PPHLN1	-6891,-6891,-6891,-6891,-6891,-6891,-6843,-6891,-6891
chr5:170812243-170812767	chr5	+	170812362	170812727	True	NM_002520,NM_199185,NR_037474,NM_001037738	chr5,chr5,chr5,chr5	+,+,-,+	NPM1,NPM1,MIR3912,NPM1	1980,1980,1098,1980
chr5:138838353-138839811	chr5	+	138838460	138839683	True	NM_003339,NM_001077693	chr5,chr5	+,-	UBE2D2,ECSCR	101067,2688
chr17:42346474-42347138	chr17	+	42346544	42347003	True	NM_001144826,NM_000342	chr17,chr17	+,-	RUNDC3A,SLC4A1	38923,-1042
chr17:54907560-54909350	chr17	+	54908344	54909274	True	NM_001085430,NM_003647	chr17,chr17	-,+	C17orf67,DGKE	-15094,2185
chr2:73042339-73043142	chr2	+	73042772	73043019	True	NM_015189,NM_003124	chr2,chr2	-,+	EXOC6B,SPR	10210,71492
chr1:94340347-94340844	chr1	+	94340346	94340792	True	NM_014597,NR_030621	chr1,chr1	-,+	DNTTIP2,MIR760	4022,-28010
chr4:156132965-156133641	chr4	+	156132990	156133668	True	NM_000910,NM_001039580	chr4,chr4	+,-	NPY2R,MAP9	-3262,164504
chr17:47440502-47441211	chr17	+	47440537	47441216	True	NM_014897,NR_034161,NM_001145365	chr17,chr17,chr17	-,+,-	ZNF652,FLJ40194,ZNF652	-702,-114983,-1061
chr7:151655242-151656138	chr7	+	151655366	151656134	True	NM_145292,NM_016203,NR_033169	chr7,chr7,chr7	+,-,+	GALNTL5,PRKAG2,GALNTL5	-1953,-81050,-1953
chr17:80291842-80292049	chr17	+	80291843	80291907	True	NM_003004,NM_207459	chr17,chr17	-,+	SECTM1,TEX19	64,25215
chrX:71351148-71351453	chrX	+	71351150	71351392	True	NM_207422,NM_001024455	chrX,chrX	+,-	FLJ44635,RGAG4	12641,409
chr1:241803783-241804187	chr1	+	241803959	241804151	True	NM_014322,NM_144625,NM_001821	chr1,chr1,chr1	-,+,-	OPN3,WDR64,CHML	-258,11428,-4727
chr5:93376827-93378101	chr5	+	93376930	93377813	True	NM_001163417,NM_005654	chr5,chr5	-,+	FAM172A,NR2F1	69646,-457947
chr7:1127782-1128129	chr7	+	1127829	1128073	True	NM_001098201,NM_001134395,NM_001505,NM_001039966	chr7,chr7,chr7,chr7	+,-,+,+	GPER,C7orf50,GPER,GPER	-157,49870,-1437,-1437
chrX:18441743-18442033	chrX	+	18441796	18442048	True	NR_033717,NM_003159	chrX,chrX	-,+	SCML2,CDKL5	-68952,1676
chr12:112125962-112126375	chr12	+	112125970	112126300	True	NM_006768,NM_001136538,NM_025247	chr12,chr12,chr12	-,+,+	BRAP,ACAD10,ACAD10	-2180,-2170,-2170
chr1:46767555-46767758	chr1	+	46767659	46767793	True	NM_006369,NM_006004	chr1,chr1	-,+	LRRC41,UQCRH	1295,1586
chr6:24662898-24663222	chr6	+	24662931	24663158	True	NM_018473,NM_016614,NM_001160094	chr6,chr6,chr6	+,-,+	ACOT13,TDP2,ACOT13	4104,4016,4104
chr4:185395025-185395399	chr4	+	185395077	185395400	True	NM_002199,NM_152683	chr4,chr4	-,+	IRF2,CCDC111	385,175366
chr5:37381037-37382292	chr5	+	37381167	37381820	True	NM_153485,NM_018034	chr5,chr5	-,+	NUP155,WDR70	-9970,-1806
chr6:138894101-138895155	chr6	+	138894118	138895018	True	NM_020464,NR_033896	chr6,chr6	-,+	NHSL1,FLJ46906	-450,117786
chr6:85474389-85474593	chr6	+	85474430	85474632	True	NM_001204813,NM_001080508	chr6,chr6	+,-	NT5E,TBX18	684669,-531
chr10:73532267-73533167	chr10	+	73532333	73532927	True	NM_022153,NM_001171933	chr10,chr10	-,+	C10orf54,CDH23	460,22600
chr6:13323507-13324450	chr6	+	13323618	13324290	True	NM_001143966,NM_001143964,NM_001143965,NM_016495,NM_031244	chr6,chr6,chr6,chr6,chr6	-,-,-,-,+	TBC1D7,TBC1D7,TBC1D7,TBC1D7,SIRT5	4547,4547,4547,4547,250501
chr17:18763666-18764497	chr17	+	18763736	18764469	True	NM_002767,NM_001039999	chr17,chr17	+,-	PRPSAP2,FAM83G	-2295,143646
chr6:17705754-17706375	chr6	+	17705884	17706246	True	NM_005124,NM_016255	chr6,chr6	-,+	NUP153,FAM8A1	622,-105424
chr14:51025044-51026925	chr14	+	51025601	51026721	True	NM_181598,NM_015915,NM_198794	chr14,chr14,chr14	+,+,-	ATL1,ATL1,MAP4K5	21,21,-26225
chr3:196293617-196294730	chr3	+	196293799	196294513	True	NM_001105573,NM_182627	chr3,chr3	+,-	FBXO45,WDR53	1211,950
chr15:41164497-41165189	chr15	+	41164754	41165120	True	NM_020857,NM_133639	chr15,chr15	+,-	VPS18,RHOV	21507,1417
chr11:290712-291504	chr11	+	291231	291437	True	NM_001025295,NM_025092	chr11,chr11	-,+	IFITM5,ATHL1	8139,-2144
chr9:6719735-6720551	chr9	+	6719930	6719996	True	NM_000170,NM_001146696	chr9,chr9	-,+	GLDC,KDM4C	-74238,866
chr11:809761-810052	chr11	+	809848	810018	True	NM_001004,NM_145887,NR_002585,NM_145886,NM_020376	chr11,chr11,chr11,chr11,chr11	+,-,+,-,+	RPLP2,LRDD,SNORA52,LRDD,PNPLA2	15,-4598,1662,-4598,8882
chr21:32932583-32932944	chr21	+	32932617	32932993	True	NM_000454,NM_003253	chr21,chr21	+,-	SOD1,TIAM1	98941,-1327
chr1:207223425-207223996	chr1	+	207223424	207223866	True	NM_001018053,NM_018566,NM_006212	chr1,chr1,chr1	+,-,+	PFKFB2,YOD1,PFKFB2	2753,606,2753
chrX:100111720-100113145	chrX	+	100111889	100113176	True	NM_001325,NM_007052	chrX,chrX	+,-	CSTF2,NOX1	-36593,16208
chr17:76612265-76613432	chr17	+	76612330	76613470	True	NM_173628,NM_024419	chr17,chr17	-,+	DNAH17,PGS1	-38854,-237646
chr1:102462319-102462588	chr1	+	102462328	102462620	True	NR_033424,NM_058170	chr1,chr1	+,-	DNAJA1P5,OLFM3	-124812,220
chr14:67999358-67999634	chr14	+	67999384	67999602	True	NM_020715,NM_182526	chr14,chr14	+,-	PLEKHH1,TMEM229B	405,-17363
chr19:50144664-50145091	chr19	+	50144964	50145124	True	NM_021228,NM_006270	chr19,chr19	+,-	SCAF1,RRAS	257,-1564
chr10:69451970-69453049	chr10	+	69452516	69453012	True	NM_013266,NM_012238	chr10,chr10	-,+	CTNNA3,SIRT1	2995,191414
chr2:132200986-132201212	chr2	+	132201124	132201192	True	NR_002826,NM_080386	chr2,chr2	-,+	LOC401010,TUBA3D	1325,32473
chr11:60973323-60973625	chr11	+	60973476	60973551	True	NM_001079807,NM_017966	chr11,chr11	+,-	PGA3,VPS37C	-2552,-44560
chr8:133112937-133113472	chr8	+	133112989	133113493	True	NM_015137,NM_001145095	chr8,chr8	+,-	EFR3A,HHLA1	-196684,4069
chr2:39891792-39892587	chr2	+	39891821	39892535	True	NM_152390,NM_001167959,NM_025264	chr2,chr2,chr2	+,+,-	TMEM178,TMEM178,THUMPD2	499,102,113931
chr7:38948570-38948802	chr7	+	38948693	38948829	True	NM_014396,NM_080631,NM_001166018	chr7,chr7,chr7	-,-,+	VPS41,VPS41,POU6F2	21,21,68779
chr19:39903632-39904013	chr19	+	39903636	39903970	True	NM_019088,NM_003407,NM_022835	chr19,chr19,chr19	-,+,+	PAF1,ZFP36,PLEKHG2	-21957,-6200,63
chr20:6749708-6749932	chr20	+	6749740	6749979	True	NM_017671,NM_001200	chr20,chr20	-,+	FERMT1,BMP2	-645549,-1051
chr7:98466845-98467113	chr7	+	98466848	98467006	True	NM_001134450,NM_001134451,NM_152913,NM_003496	chr7,chr7,chr7,chr7	-,-,-,+	TMEM130,TMEM130,TMEM130,TRRAP	717,717,717,9106
chr3:186440463-186441528	chr3	+	186440497	186441388	True	NM_001102416,NM_002916,NM_001166451,NM_000893	chr3,chr3,chr3,chr3	+,-,+,+	KNG1,RFC4,KNG1,KNG1	-5450,82961,-5450,-5450
chr18:47898836-47899229	chr18	+	47898835	47899225	True	NM_145060,NM_001039535,NM_014593	chr18,chr18,chr18	+,+,-	SKA1,SKA1,CXXC1	2166,2166,-84143
chr4:146620131-146620568	chr4	+	146620172	146620460	True	NM_001080531,NM_178835	chr4,chr4	+,-	C4orf51,ZNF827	-18867,239197
chr17:1735518-1735839	chr17	+	1735577	1735650	True	NM_052928,NM_002945	chr17,chr17	-,+	SMYD4,RPA1	-2402,-2358
chr17:49244614-49245518	chr17	+	49244689	49245533	True	NM_001198682,NM_002512,NM_003971,NM_001018137,NM_001018138,NM_001018139	chr17,chr17,chr17,chr17,chr17,chr17	+,+,-,+,+,+	NME2,NME2,SPAG9,NME2,NME2,NME2	-1107,-1107,-46463,-1944,-657,-878
chr12:51613213-51614048	chr12	+	51613236	51614068	True	NR_026893,NM_001136264	chr12,chr12	-,+	POU6F1,DAZAP2	-1759,18439
chr19:54760760-54761820	chr19	+	54760929	54761827	True	NM_001013,NM_001081442,NM_001081443,NM_006840	chr19,chr19,chr19,chr19	+,-,-,-	RPS9,LILRB5,LILRB5,LILRB5	-56254,228,228,228
chr14:55659883-55661042	chr14	+	55660533	55661033	True	NR_003225,NM_001146015,NM_014750	chr14,chr14,chr14	+,-,-	LGALS3,DLGAP5,DLGAP5	-56891,-2137,-2137
chr1:207121119-207122692	chr1	+	207121295	207122489	True	NM_002644,NM_006850	chr1,chr1	-,+	PIGR,IL24	-1484,-50558
chr3:9943846-9944589	chr3	+	9944013	9944615	True	NM_001193380,NM_153480,NM_001199552,NM_153483	chr3,chr3,chr3,chr3	+,+,-,+	IL17RE,IL17RE,CIDEC,IL17RE	-104,-104,-22075,16
chr17:6657663-6659010	chr17	+	6658173	6658985	True	NM_199139,NM_177550,NM_017523	chr17,chr17,chr17	+,-,+	XAF1,SLC13A5,XAF1	170,-41433,170
chr1:84442708-84442991	chr1	+	84442762	84443040	True	NM_207578,NM_024686	chr1,chr1	+,-	PRKACB,TTLL7	100704,21851
chr19:18385941-18386165	chr19	+	18385992	18386060	True	NM_025249,NR_036155,NM_005354,NM_001145304,NM_001145305	chr19,chr19,chr19,chr19,chr19	-,+,-,-,-	KIAA1683,MIR3188,JUND,KIAA1683,KIAA1683	-673,6826,6422,-673,-673
chr19:42947860-42948854	chr19	+	42948157	42948811	True	NM_198477,NM_001410	chr19,chr19	-,+	CXCL17,MEGF8	-1021,-118454
chr1:34632252-34632457	chr1	+	34632251	34632491	True	NM_052896,NM_032884	chr1,chr1	-,+	CSMD2,C1orf94	-808,132
chr18:22009832-22011599	chr18	+	22010281	22011414	True	NM_018439,NM_080597	chr18,chr18	+,-	IMPACT,OSBPL1A	-3723,-32491
chr9:125024953-125026870	chr9	+	125025229	125026869	True	NR_027126,NM_001173512,NR_027125,NM_033117,NM_138777,NM_199177	chr9,chr9,chr9,chr9,chr9,chr9	-,+,-,-,+,+	RBM18,MRRF,RBM18,RBM18,MRRF,MRRF	324,12,324,324,12,6273
chr9:139009382-139009619	chr9	+	139009387	139009511	True	NM_015597,NM_152833	chr9,chr9	+,-	GPSM1,C9orf69	212420,1270
chr1:40627833-40628323	chr1	+	40627905	40628355	True	NM_001142604,NM_012421	chr1,chr1	-,+	PPT1,RLF	-64763,-915
chr1:9145073-9146407	chr1	+	9145615	9146423	True	NM_001215,NR_024180	chr1,chr1	+,-	CA6,SLC2A5	-139745,2137
chr7:65668765-65669293	chr7	+	65669168	65669303	True	NR_026873,NM_003596	chr7,chr7	-,+	NCRNA00174,TPST1	196145,955
chrX:80495345-80496828	chrX	+	80495346	80496743	True	NM_003022,NM_030763	chrX,chrX	+,-	SH3BGRL,HMGN5	-38097,-37905
chr16:86599109-86599378	chr16	+	86599163	86599233	True	NM_005251,NR_027490	chr16,chr16	+,-	FOXC2,MTHFSD	1623,-10322
chr1:97144197-97145184	chr1	+	97144259	97145233	True	NM_000110,NM_021190	chr1,chr1	-,+	DPYD,PTBP2	1241436,41941
chrX:69508896-69509157	chrX	+	69508923	69509195	True	NM_012310,NM_016484,NM_001032726	chrX,chrX,chrX	+,-,+	KIF4A,PDZD11,RAB41	683,653,-6952
chr16:3062414-3062850	chr16	+	3062448	3062740	True	NM_021195,NM_020982,NM_016639	chr16,chr16,chr16	-,+,+	CLDN6,CLDN9,TNFRSF12A	5498,-42,7572
chr19:7704128-7705896	chr19	+	7704143	7705859	True	NM_006949,NR_033242,NM_020196,NM_174895,NM_001127396,NM_001171155	chr19,chr19,chr19,chr19,chr19,chr19	+,+,-,-,+,+	STXBP2,LOC100131801,XAB2,PCP2,STXBP2,LOC100131801	-2203,-9523,-9704,-5573,-2203,-9523
chr2:130953951-130955338	chr2	+	130954038	130955186	True	NM_025029,NM_207312	chr2,chr2	+,-	MZT2B,TUBA3E	-14588,906
chr2:130953951-130955338	chr2	-	132235341	132235642	False	NM_001085365,NM_080386	chr2,chr2	-,+	MZT2A,TUBA3D	14472,-1727
chr9:31892910-31894261	chr9	+	31892910	31894260	True	NM_014314,NM_002197	chr9,chr9	-,+	DDX58,ACO1	632112,490340
chr12:46121743-46121950	chr12	+	46121772	46121965	True	NR_028408,NM_152641	chr12,chr12	-,+	LOC400027,ARID2	-68,1654
chr17:28268030-28269857	chr17	+	28268104	28269621	True	NM_198529,NR_026738,NM_033389	chr17,chr17,chr17	+,+,-	EFCAB5,EFCAB5,SSH2	1,1,-11086
chr1:1511297-1511937	chr1	+	1511512	1511944	True	NM_001170686,NM_014188	chr1,chr1	+,-	MIB2,SSU72	38850,-1250
chr9:139442155-139442378	chr9	+	139442244	139442396	True	NM_017617,NM_152571	chr9,chr9	-,+	NOTCH1,C9orf163	-2006,-64348
chr5:87974777-87975810	chr5	+	87974842	87975771	True	NR_024383,NR_015436,NM_022650,NR_024384	chr5,chr5,chr5,chr5	-,-,+,-	LOC645323,LOC645323,RASA1,LOC645323	-580,4899,-1410128,-5696
chr17:11509359-11509721	chr17	+	11509436	11509744	True	NM_144680,NM_001372	chr17,chr17	-,+	ZNF18,DNAH9	391003,-7745
chr3:194407698-194407945	chr3	+	194407714	194407926	True	NM_018385,NM_153690	chr3,chr3	-,+	LSG1,FAM43A	-14508,-1143
chr2:32288255-32288559	chr2	+	32288264	32288532	True	NM_199436,NM_032574,NM_014946	chr2,chr2,chr2	+,-,+	SPAST,DPY30,SPAST	147,-23420,147
chr15:76257488-76259346	chr15	+	76257644	76258991	True	NR_003136,NR_037623	chr15,chr15	-,+	FBXO22OS,FBXO22	-32173,-61503
chr9:131466600-131467051	chr9	+	131466723	131466799	True	NM_013355,NM_032799	chr9,chr9	+,-	PKN3,ZDHHC12	-1972,19659
chr17:80474331-80476306	chr17	+	80474683	80475983	True	NR_036519,NM_004514	chr17,chr17	-,+	C17orf62,FOXK2	-65976,1610
chr9:108212351-108213111	chr9	+	108212352	108212741	True	NM_001145313,NM_031919,NM_207647,NM_005502	chr9,chr9,chr9,chr9	+,+,+,-	FSD1L,FSD1L,FSD1L,ABCA1	-2089,-2089,-2079,-521825
chr2:44506995-44507963	chr2	+	44507129	44508005	True	NM_001042385,NM_000341	chr2,chr2	-,+	PREPL,SLC3A1	78938,-4583
chr8:95213022-95214556	chr8	+	95213058	95214347	True	NM_004063,NM_001161778	chr8,chr8	-,+	CDH17,PDP1	6518,-283125
chr6:10417181-10417529	chr6	+	10417190	10417436	True	NM_001032280,NM_001042425,NM_003220,NR_033910	chr6,chr6,chr6,chr6	-,-,-,+	TFAP2A,TFAP2A,TFAP2A,LOC100130275	-4583,2411,-1720,-4690
chr9:130467919-130469173	chr9	+	130468333	130468983	True	NM_001002913,NM_144965,NM_001012502	chr9,chr9,chr9	-,+,+	PTRH1,TTC16,C9orf117	9003,9374,287
chr5:160976973-160977373	chr5	+	160976989	160977267	True	NM_000811,NM_021911,NM_000813	chr5,chr5,chr5	+,-,-	GABRA6,GABRB2,GABRB2	135390,-1859,-1859
chr10:5000416-5002286	chr10	+	5000536	5002035	True	NR_026743,NM_001353	chr10,chr10	-,+	tAKR,AKR1C1	-42071,3418
chr10:5000416-5002286	chr10	-	5049390	5050119	False	NM_001135241,NM_001353	chr10,chr10	-,+	AKR1C2,AKR1C1	-3337,-43994
chr19:785781-786167	chr19	+	786115	786181	True	NM_024888,NM_002819	chr19,chr19	-,+	LPPR3,PTBP1	35821,11210
chr1:220864194-220864757	chr1	+	220864350	220864730	True	NM_024709,NM_012414	chr1,chr1	+,-	C1orf115,RAB3GAP2	-773,-418507
chr11:13703241-13704424	chr11	+	13703244	13704135	True	NM_032228,NM_000315	chr11,chr11	+,-	FAR1,PTH	-13089,-185677
chr12:56660738-56660964	chr12	+	56660740	56660980	True	NM_173595,NM_144576,NM_001099337	chr12,chr12,chr12	-,+,+	ANKRD52,COQ10A,COQ10A	-8597,-149,86
chr12:8548150-8548692	chr12	+	8548531	8548627	True	NM_001007033,NR_024420	chr12,chr12	+,-	CLEC6A,LOC389634	59963,-5183
chr1:145731073-145732447	chr1	+	145731279	145732034	True	NM_002614,NM_001201326,NM_001201325,NM_007053	chr1,chr1,chr1,chr1	+,+,+,-	PDZK1,PDZK1,PDZK1,CD160	-3664,-3664,-3664,-15714
chr17:34810358-34811502	chr17	+	34810384	34811524	True	NM_001001418,NM_004773,NM_001040282	chr17,chr17,chr17	-,+,-	TBC1D3C,ZNHIT3,TBC1D3G	-2293,30948,-2281
chr17:34810358-34811502	chr17	-	36280534	36281678	False	NM_032258,NR_024178,NM_001123391	chr17,chr17,chr17	+,-,+	TBC1D3F,LOC284100,TBC1D3	2281,-36171,2281
chr17:34810358-34811502	chr17	+	34759329	34760473	False	NM_001123392,NM_004773	chr17,chr17	-,+	TBC1D3H,ZNHIT3	-2279,81999
chr17:34810358-34811502	chr17	+	34594320	34595376	False	NM_001001435,NM_001001418	chr17,chr17	+,-	CCL4L1,TBC1D3C	44657,-2293
chr17:34810358-34811502	chr17	+	34506276	34507424	False	NM_001001417,NM_001001435	chr17,chr17	-,+	TBC1D3B,CCL4L1	-2288,31043
chr7:89999087-90000242	chr7	+	89999256	89999973	True	NM_006980,NM_033107	chr7,chr7	-,+	MTERF,GTPBP10	1510100,-23336
chr10:44882287-44882867	chr10	+	44882353	44882853	True	NM_001178134,NM_000609,NM_199168,NR_033846,NM_001033886	chr10,chr10,chr10,chr10,chr10	-,-,-,+,-	CXCL12,CXCL12,CXCL12,LOC283033,CXCL12	-1808,-1808,-1808,-477652,-1808
chr16:14396375-14396613	chr16	+	14396407	14396605	True	NR_029854,NM_001134477,NR_030177	chr16,chr16,chr16	+,-,+	MIR365-1,PARN,MIR193B	6536,327565,1218
chr18:501393-501650	chr18	+	501433	501647	True	NM_130386,NM_004066	chr18,chr18	-,+	COLEC12,CETN1	-704,78721
chr17:39889688-39890042	chr17	+	39889775	39890076	True	NM_000805,NM_177977,NM_001079870,NM_001079871	chr17,chr17,chr17,chr17	+,-,-,-	GAST,HAP1,HAP1,HAP1	-21213,872,872,872
chr11:299135-299434	chr11	+	299305	299393	True	NM_006435,NM_001025295	chr11,chr11	+,-	IFITM2,IFITM5	8713,183
chr16:4521793-4522365	chr16	+	4521987	4522206	True	NM_020677,NM_002134,NM_001127204,NM_001127206	chr16,chr16,chr16,chr16	-,+,+,+	NMRAL1,HMOX2,HMOX2,HMOX2	2749,4134,4134,2512
chr19:42945009-42946679	chr19	+	42945247	42946215	True	NM_198477,NM_001410	chr19,chr19	-,+	CXCL17,MEGF8	971,-115537
chr19:40476819-40477095	chr19	+	40476894	40477138	True	NM_153001,NM_003890,NM_006503	chr19,chr19,chr19	+,-,+	PSMC4,FCGBP,PSMC4	-6,-36361,-6
chr19:52406926-52407558	chr19	+	52407097	52407520	True	NM_023074,NM_001031721	chr19,chr19	-,+	ZNF649,ZNF613	842,23167
chrX:83362038-83363770	chrX	+	83362456	83363759	True	NM_021118,NM_014496	chrX,chrX	+,-	CYLC1,RPS6KA6	-246345,79234
chr1:153963507-153965122	chr1	+	153963524	153965171	True	NM_002870,NM_001030	chr1,chr1	-,+	RAB13,RPS27	-4718,-339
chr7:138717760-138719544	chr7	+	138718154	138719433	True	NM_001144920,NM_080660	chr7,chr7	+,-	TTC26,ZC3HAV1L	99056,1392
chr2:229404361-229406178	chr2	+	229404574	229405999	True	NM_178821,NM_030623	chr2,chr2	+,-	WDR69,SPHKAP	-668310,-358213
chr20:23587394-23587723	chr20	+	23587419	23587765	True	NM_001008693,NR_001279	chr20,chr20	-,+	CST9,CSTT	-809,-87687
chr5:712472-712946	chr5	+	712504	712692	True	NM_018140,NM_007030	chr5,chr5	+,-	CEP72,TPPP	-100150,-18994
chr8:11560508-11560728	chr8	+	11560512	11560690	True	NM_002052,NM_001908	chr8,chr8	+,-	GATA4,CTSB	1026,165006
chr11:33033929-33034243	chr11	+	33034057	33034156	True	NM_139160,NM_001077242,NM_001326	chr11,chr11,chr11	+,+,-	DEPDC7,DEPDC7,CSTF3	3571,3253,148938
chr22:24640684-24641312	chr22	+	24640733	24641189	True	NM_001099782,NM_001099781,NM_004121,NR_003714	chr22,chr22,chr22,chr22	-,-,-,+	GGT5,GGT5,GGT5,POM121L9P	-29,-29,-29,6399
chr20:55107861-55108222	chr20	+	55107933	55108269	True	NM_001012971,NM_001013646,NM_080615	chr20,chr20,chr20	+,+,-	C20orf106,C20orf107,GCNT7	-8199,32,-6952
chr10:6339183-6340782	chr10	+	6339225	6340812	True	NM_004566,NM_000417	chr10,chr10	+,-	PFKFB3,IL2RA	-94436,-234892
chr14:94389614-94390036	chr14	+	94389753	94390077	True	NM_138344,NR_027004	chr14,chr14	+,-	FAM181A,C14orf86	-4546,2691
chr19:10564056-10564566	chr19	+	10564239	10564533	True	NM_006202,NM_012289	chr19,chr19	+,-	PDE4A,KEAP1	-657,48998
chr6:97285211-97285440	chr6	+	97285210	97285274	True	NM_052904,NM_030784,NM_001143957	chr6,chr6,chr6	+,-,-	KLHL32,GPR63,GPR63	87221,129,129
chr9:140150313-140150560	chr9	+	140150328	140150500	True	NM_015456,NM_001004353,NM_001001710	chr9,chr9,chr9	+,+,-	COBRA1,C9orf173,FAM166A	-620,-4649,-8106
chr8:9976458-9977739	chr8	+	9976635	9977771	True	NM_001199729,NR_029668	chr8,chr8	+,-	MSRA,MIR124-1	-23634,-215653
chr20:67272-67935	chr20	+	67533	67990	True	NM_153325,NM_001037732	chr20,chr20	+,-	DEFB125,DEFB128	360,102331
chr8:80524314-80524799	chr8	+	80524572	80524846	True	NM_001040708,NM_007029,NM_001199214	chr8,chr8,chr8	-,+,+	HEY1,STMN2,STMN2	155302,-1577,-1577
chr19:1491972-1492272	chr19	+	1491988	1492110	True	NM_138393,NM_017573	chr19,chr19	+,-	REEP6,PCSK4	-874,-1581
chr17:79650105-79650500	chr17	+	79650110	79650532	True	NM_001040025,NM_004712	chr17,chr17	-,+	ARL16,HGS	472,429
chr4:103944649-103946271	chr4	+	103944683	103946253	True	NM_001008388,NM_001100874,NM_139173	chr4,chr4,chr4	+,-,-	CISD2,NHEDC1,NHEDC1	-154616,-3787,-3787
chr4:187157190-187158091	chr4	+	187157438	187158106	True	NR_033900,NM_000892	chr4,chr4	-,+	LOC285441,KLKB1	264156,-8832
chrX:133403436-133404594	chrX	+	133403648	133404381	True	NM_001101357,NR_029523	chrX,chrX	+,-	CCDC160,MIR106A	-32629,-99340
chr1:1564975-1565221	chr1	+	1564975	1565079	True	NM_006983,NM_014188,NR_002946	chr1,chr1,chr1	+,-,+	MMP23B,SSU72,MMP23A	2480,-54713,3079
chr13:53118693-53120030	chr13	+	53118692	53119906	True	NM_016075,NR_002793	chr13,chr13	-,+	VPS36,TPTE2P3	-93929,-55624
chr13:53118693-53120030	chr13	-	52835829	52836065	False	NM_001098525,NR_033775	chr13,chr13	+,-	CKAP2,TPTE2P2	193429,28113
chr16:4290507-4290798	chr16	+	4290631	4290847	True	NM_001098814,NM_032575	chr16,chr16	-,+	SRL,GLIS2	1284,91377
chr8:25318637-25319862	chr8	+	25318818	25319835	True	NM_017634,NM_152562	chr8,chr8	-,+	KCTD9,CDCA2	-2834,-2367
chr22:16414419-16414748	chr22	+	16414498	16414762	True	NM_001005239,NR_001591	chr22,chr22	-,+	OR11H1,psiTPTE22	35092,668038
chr22:16414419-16414748	chr16	+	84778902	84778954	False	NM_005153,NM_021149	chr16,chr16	+,-	USP10,COTL1	-45400,-127233
chr22:16414419-16414748	chr14	-	19412629	19412893	False	NM_001145442,NM_001013354	chr14,chr14	-,+	POTEM,OR11H12	607431,-35086
chr22:16414419-16414748	chr14	+	20146819	20147065	False	NM_001197287,NM_172194	chr14,chr14	-,+	OR11H2,OR4Q3	35476,68521
chr14:105632547-105633100	chr14	+	105632561	105633093	True	NM_033271,NM_145159,NM_002226	chr14,chr14,chr14	+,-,-	BTBD6,JAG2,JAG2	81785,2118,2118
chr9:114543857-114544414	chr9	+	114544039	114544161	True	NM_003358,NM_173521	chr9,chr9	+,-	UGCG,C9orf84	115044,1676
chr2:27594366-27596320	chr2	+	27594595	27596133	True	NM_001201459,NM_001034116,NM_014748,NM_015636,NM_144631,NM_172195	chr2,chr2,chr2,chr2,chr2,chr2	-,-,+,-,-,-	ZNF513,EIF2B4,SNX17,EIF2B4,ZNF513,EIF2B4	7228,-1271,-1270,-1271,7528,-1676
chr9:71632571-71634382	chr9	+	71632635	71634181	True	NM_000144,NM_002732	chr9,chr9	+,-	FXN,PRKACG	16297,-3596
chr6:166582321-166582583	chr6	+	166582331	166582573	True	NM_003181,NR_027284	chr6,chr6	-,+	T,LOC441177	-200,-181343
chr8:67982018-67982620	chr8	+	67982220	67982434	True	NM_024790,NM_006837	chr8,chr8	+,-	CSPP1,COPS5	-5684,-7658
chr2:160142152-160142463	chr2	+	160142234	160142428	True	NM_152528,NM_001128213,NM_033394,NM_001128212	chr2,chr2,chr2,chr2	-,-,+,-	WDSUB1,WDSUB1,TANC1,WDSUB1	685,725,-317146,858
chr3:122091533-122092364	chr3	+	122091801	122092123	True	NM_014367,NM_001017928	chr3,chr3	+,-	FAM162A,CCDC58	10899,10014
chrX:133932144-133933340	chrX	+	133932258	133933364	True	NM_001170779,NM_001170782,NM_001166599,NM_001170757,NM_001170756,NM_001166600,NM_001170783,NM_001170784,NM_001170780,NM_138819,NM_001170781,NM_145284	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,-,-,-,-,+,+,+,+,+,-	FAM122C,FAM122C,FAM122B,FAM122B,FAM122B,FAM122B,FAM122C,FAM122C,FAM122C,FAM122C,FAM122C,FAM122B	7858,7840,-1073,-996,-1873,-996,7858,7840,-1866,7858,7858,-1873
chr19:2249215-2249644	chr19	+	2249324	2249684	True	NR_036207,NM_144616,NM_000479	chr19,chr19,chr19	+,-,+	MIR4321,JSRP1,AMH	953,6788,-262
chr6:44365912-44367481	chr6	+	44365930	44367385	True	NM_001253,NM_020745	chr6,chr6	+,-	CDC5L,AARS2	-10679,-84867
chr20:25232666-25234007	chr20	+	25232695	25233651	True	NR_027091,NM_002862	chr20,chr20	-,+	LOC284798,PYGB	-103269,-4040
chr9:36168709-36169733	chr9	+	36168787	36169727	True	NM_001190383,NM_005893	chr9,chr9	-,+	GNE,CCIN	88819,9
chr17:57284595-57284985	chr17	+	57284818	57284911	True	NM_182620,NM_018149	chr17,chr17	-,+	SKA2,C17orf71	-52018,2459
chr17:57284595-57284985	chr17	+	57283805	57284046	False	NM_182620,NM_018149	chr17,chr17	-,+	SKA2,C17orf71	-51005,3324
chr9:93407701-93409546	chr9	+	93407795	93409417	True	NM_017594,NM_001135052	chr9,chr9	-,+	DIRAS2,SYK	-2687,154594
chr10:92647435-92648211	chr10	+	92647436	92648128	True	NM_019860,NM_001104546	chr10,chr10	-,+	HTR7,RPP30	-29765,-15789
chr14:51904313-51905493	chr14	+	51904626	51905538	True	NM_001042481,NR_037676	chr14,chr14	+,-	FRMD6,C14orf82	50316,212980
chrX:17874620-17875179	chrX	+	17874710	17875144	True	NM_006746,NM_001172739,NM_001172732,NR_033349,NR_033348,NM_021785,NM_001172743	chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,-,-,-,-,-,-	SCML1,RAI2,RAI2,RAI2,RAI2,RAI2,RAI2	-119169,4363,4363,3853,3853,4363,4363
chr17:48943397-48943649	chr17	+	48943483	48943665	True	NM_005749,NM_175575	chr17,chr17	-,+	TOB1,WFIKKN2	-2070,-30929
chr10:124698068-124698631	chr10	+	124698166	124698552	True	NM_024942,NM_001029888	chr10,chr10	-,+	C10orf88,FAM24A	15417,-28009
chr22:45066239-45066531	chr22	+	45066304	45066556	True	NM_032287,NM_001198721,NM_001017528,NM_001017529,NM_001017530,NM_015366	chr22,chr22,chr22,chr22,chr22,chr22	-,+,+,+,+,+	LDOC1L,PRR5,PRR5,PRR5,PRR5,PRR5	-172299,6131,-1928,-1928,6131,6131
chr16:282030-282569	chr16	+	282055	282603	True	NM_201412,NM_018032,NM_032039	chr16,chr16,chr16	-,-,+	LUC7L,LUC7L,ITFG3	-2606,-2606,2197
chr2:89065317-89065531	chr2	+	89065396	89065542	True	NM_004836,NR_015424	chr2,chr2	-,+	EIF2AK3,ANKRD36BP2	-138302,-28
chr11:68610741-68611281	chr11	+	68610752	68611000	True	NM_001031847,NM_002180,NM_001876	chr11,chr11,chr11	-,+,-	CPT1A,IGHMBP2,CPT1A	-1353,60318,-1353
chr1:27929336-27929618	chr1	+	27929433	27929567	True	NM_001029882,NM_001143912	chr1,chr1	-,+	AHDC1,FAM76A	626,122922
chr7:5865624-5866294	chr7	+	5865843	5866091	True	NM_207116,NR_023382	chr7,chr7	-,+	RNF216,ZNF815	-44482,-3114
chrX:153202063-153203053	chrX	+	153202067	153202866	True	NM_003491,NM_001146151,NM_002910	chrX,chrX,chrX	-,+,-	NAA10,AVPR2,RENBP	-1599,-31589,7428
chr20:32813858-32814317	chr20	+	32813985	32814062	True	NM_001672,NM_000687	chr20,chr20	+,-	ASIP,AHCY	34108,77212
chr3:6914322-6916090	chr3	+	6915143	6916052	True	NR_033378,NM_181874	chr3,chr3	-,+	LOC100288428,GRM7	1627349,-12392
chr19:16433696-16435213	chr19	+	16433929	16435096	True	NM_021235,NM_016270	chr19,chr19	-,+	EPS15L1,KLF2	147716,554
chr17:48798708-48799064	chr17	+	48798727	48799112	True	NM_052855,NM_016424,NM_006107	chr17,chr17,chr17	-,+,+	ANKRD40,LUC7L3,LUC7L3	-13457,-1865,-1865
chr22:21024161-21024446	chr22	+	21024297	21024483	True	NM_002650,NR_024592	chr22,chr22	-,+	PI4KA,POM121L4P	64522,19359
chr22:21024161-21024446	chr22	+	22471427	22471485	False	NM_007128,NM_003935	chr22,chr22	+,-	VPREB1,TOP3B	127714,-134280
chr22:21024161-21024446	chr1	+	214781206	214781264	False	NM_016343,NM_005401	chr1,chr1	+,-	CENPF,PTPN14	-4725,-56182
chr4:187475070-187475828	chr4	+	187475170	187475757	True	NM_000128,NM_005958	chr4,chr4	+,-	F11,MTNR1A	-288109,830
chr8:86374893-86375679	chr8	+	86374931	86375490	True	NM_001738,NM_000067	chr8,chr8	-,+	CA1,CA2	-84589,640
chr15:34824006-34824994	chr15	+	34824116	34824592	True	NM_001023567,NM_175741,NR_036050,NR_036261	chr15,chr15,chr15,chr15	-,+,-,-	GOLGA8B,C15orf55,MIR1233-1,MIR1233-2	3680,-186101,-3544,-3544
chr15:34824006-34824994	chr15	+	34677895	34678209	False	NM_175741,NR_036050,NM_181077,NR_036261	chr15,chr15,chr15,chr15	+,-,-,-	C15orf55,MIR1233-1,GOLGA8A,MIR1233-2	-39880,-3544,3842,-3544
chr18:71957049-71957336	chr18	+	71957093	71957351	True	NM_001914,NM_148923,NM_001190807,NM_001174123	chr18,chr18,chr18,chr18	-,-,-,+	CYB5A,CYB5A,CYB5A,DKFZP781G0119	1950,1950,1950,25758
chrX:25033331-25033673	chrX	+	25033394	25033660	True	NM_139058,NR_003007	chrX,chrX	-,+	ARX,SCARNA23	455,-270888
chrX:13752535-13752780	chrX	+	13752634	13752824	True	NM_001128835,NM_001011658,NM_014563,NM_003611	chrX,chrX,chrX,chrX	-,-,-,+	TRAPPC2,TRAPPC2,TRAPPC2,OFD1	-20,-20,-20,7
chr19:44219288-44220120	chr19	+	44219833	44220049	True	NM_019108,NM_019612	chr19,chr19	-,+	C19orf61,IRGC	39143,164
chr2:206950886-206951095	chr2	+	206950901	206951080	True	NM_001037663,NM_017759	chr2,chr2	+,-	EEF1B2,INO80D	73237,5
chr22:20794273-20794975	chr22	+	20794455	20794883	True	NM_182895,NM_153334,NR_003253	chr22,chr22,chr22	-,-,+	SCARF2,SCARF2,ZNF74	-2309,-2309,-46026
chr16:72209517-72209894	chr16	+	72209560	72209930	True	NM_001160213,NM_031293,NM_014003	chr16,chr16,chr16	-,-,+	PMFBP1,PMFBP1,DHX38	-3211,-3496,-82004
chr7:50627823-50628623	chr7	+	50627862	50628557	True	NM_000790,NM_001082971,NR_033845	chr7,chr7,chr7	-,-,+	DDC,DDC,LOC100129427	262,4648,-28456
chr19:44220787-44221244	chr19	+	44220891	44221147	True	NM_019108,NM_019612	chr19,chr19	-,+	C19orf61,IRGC	38045,-728
chr17:21524006-21525506	chr17	+	21524384	21525329	True	NM_001113434,NM_001194958	chr17,chr17	-,+	C17orf51,KCNJ18	-69443,-215995
chr2:73439881-73440155	chr2	+	73439902	73440121	True	NM_006062,NM_032319	chr2,chr2	+,-	SMYD5,C2orf7	1244,20292
chr19:912383-912589	chr19	+	912383	912509	True	NM_138774,NM_032551	chr19,chr19	-,+	C19orf22,KISS1R	766,4832
chr10:75534157-75535936	chr10	+	75534473	75535807	True	NM_015037,NM_003635,NM_203298,NM_173540	chr10,chr10,chr10,chr10	+,-,+,+	KIAA0913,NDST2,CHCHD1,FUT11	9797,35838,6000,-2475
chr2:107146553-107146925	chr2	+	107146560	107146846	True	NM_001144013,NR_003506	chr2,chr2	-,+	RGPD3,PLGLA	-61759,-143842
chr11:9007009-9007339	chr11	+	9007041	9007339	True	NM_182901,NM_020645	chr11,chr11	+,-	C11orf17,NRIP3	-74303,18307
chr9:117849412-117850139	chr9	+	117849465	117849950	True	NM_017418,NM_002160	chr9,chr9	+,-	DEC1,TNC	54146,30599
chr9:131711297-131712495	chr9	+	131711373	131711573	True	NM_015354,NM_014908	chr9,chr9	+,-	NUP188,DOLK	-1460,-1361
chr22:35847040-35847453	chr22	+	35847140	35847494	True	NM_005368,NM_006739	chr22,chr22	-,+	MB,MCM5	165940,-51075
chr15:85290944-85291279	chr15	+	85290957	85291327	True	NM_014630,NM_014300	chr15,chr15	+,-	ZNF592,SEC11A	490,-31283
chr20:31278110-31278651	chr6	+	33545383	33547822	True	NR_028361,NM_001188	chr6,chr6	+,-	GGNBP1,BAK1	3653,2687
chr21:43527397-43528088	chr21	+	43527657	43527861	True	NM_173568,NR_027243	chr21,chr21	+,-	UMODL1,C21orf128	-36282,833
chr1:87796407-87797099	chr1	+	87796503	87797042	True	NM_006769,NM_203341	chr1,chr1	+,-	LMO4,SEP15	-2409,-416396
chr7:77030403-77031585	chr7	+	77030403	77031557	True	NM_002835,NM_017439	chr7,chr7	+,-	PTPN12,PION	135215,14210
chr19:40894083-40894395	chr19	+	40894218	40894372	True	NM_012268,NM_144685	chr19,chr19	+,-	PLD3,HIPK4	-39944,1772
chr1:226483072-226483950	chr1	+	226483252	226483947	True	NM_173083,NM_031944	chr1,chr1	-,+	LIN9,MIXL1	13302,-71932
chr18:72201527-72201773	chr18	+	72201640	72201774	True	NR_024484,NM_032649	chr18,chr18	-,+	LOC400657,CNDP1	63347,1
chr18:44702165-44702385	chr18	+	44702164	44702418	True	NM_016097,NM_031303	chr18,chr18	-,+	IER3IP1,KATNAL2	377,-175428
chr2:213987704-213989245	chr2	+	213987725	213989229	True	NM_016260,NM_001025436	chr2,chr2	-,+	IKZF2,SPAG16	25879,159886
chr8:1992963-1993233	chr8	+	1992975	1993275	True	NR_033895,NM_003970	chr8,chr8	-,+	LOC286083,MYOM2	-742148,-14
chr6:32486361-32487312	chr6	+	32486423	32487122	True	NM_002125,NM_019111	chr6,chr6	-,+	HLA-DRB5,HLA-DRA	10941,-78855
chr19:14692757-14694002	chr19	+	14692768	14693997	True	NM_004146,NM_207390,NM_001204118	chr19,chr19,chr19	-,+,+	NDUFB7,CLEC17A,CLEC17A	-9879,46,46
chr13:41635671-41635872	chr13	+	41635674	41635854	True	NM_172373,NM_007187	chr13,chr13	-,+	ELF1,WBP4	-42166,-28
chr13:19690639-19691812	chr13	+	19690659	19691691	True	NR_002801,NR_026852	chr13,chr13	-,+	PHF2P1,LOC348021	782,-108311
chr10:135379738-135380659	chr10	+	135379829	135380706	True	NM_130784,NR_033789,NM_001143763,NM_001143764,NM_000773	chr10,chr10,chr10,chr10,chr10	-,-,-,-,+	SYCE1,SPRNP1,SYCE1,SYCE1,CYP2E1	2220,2806,-691,-691,-39013
chr19:50095434-50095689	chr19	+	50095590	50095704	True	NM_015953,NM_020719	chr19,chr19	-,+	NOSIP,PRR12	-11787,-729
chr6:11112272-11112575	chr6	+	11112272	11112488	True	NM_001135575,NM_207582	chr6,chr6	+,-	LOC221710,ERVFRDE1	-18057,-201
chr13:114312386-114312615	chr13	+	114312390	114312640	True	NM_000705,NM_002929	chr13,chr13	-,+	ATP4B,GRK1	-17,8956
chr1:48338661-48339976	chr1	+	48338998	48339867	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	122746,348489
chr17:10303442-10303971	chr17	+	10303624	10303964	True	NM_020233,NM_002472	chr17,chr17	+,-	C17orf48,MYH8	296962,21353
chr2:202131789-202132197	chr2	+	202131943	202132235	True	NM_001080125,NM_001127391,NM_033356	chr2,chr2,chr2	+,-,+	CASP8,ALS2CR12,CASP8	-9241,89916,-6772
chr6:52926652-52928611	chr6	+	52926829	52928611	True	NM_012347,NM_014920,NM_033481,NM_033480,NM_016513	chr6,chr6,chr6,chr6,chr6	+,-,+,+,-	FBXO9,ICK,FBXO9,FBXO9,ICK	7159,-229,1184,1645,-229
chr6:33286821-33288312	chr6_qbl_hap6	+	4519200	4520552	False	NM_001145338,NM_001350,NM_172208,NM_001185181,NM_005453,NM_172209,NM_001141970,NM_003190,NM_001141969	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,TAPBP,PFDN6,ZBTB22,TAPBP,DAXX,TAPBP,DAXX	-1234,2540,-4790,-29606,-1441,-4790,2540,-4790,2540
chr6:33286821-33288312	chr6_mcf_hap5	+	4760693	4762045	False	NM_001145338,NM_001350,NM_172208,NM_001185181,NM_005453,NM_172209,NM_001141970,NM_003190,NM_001141969	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,TAPBP,PFDN6,ZBTB22,TAPBP,DAXX,TAPBP,DAXX	-1231,2540,-4787,-29598,-1438,-4787,2540,-4787,2540
chr6:33286821-33288312	chr6_cox_hap2	+	4730767	4731611	False	NM_001145338,NM_001350,NM_172208,NM_001185181,NM_005453,NM_172209,NM_001141970,NM_003190,NM_001141969	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,TAPBP,PFDN6,ZBTB22,TAPBP,DAXX,TAPBP,DAXX	-1233,3050,-4791,-29602,-1440,-4791,3050,-4791,3050
chr6:33286821-33288312	chr6	+	33286951	33288303	True	NM_001145338,NM_001350,NR_024517,NM_172208,NM_001185181,NM_005453,NM_172209,NM_001141970,NM_003190,NM_001141969	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,TAPBP,PFDN6,ZBTB22,TAPBP,DAXX,TAPBP,DAXX	-1232,2540,2540,-4787,-29600,-1439,-4787,2540,-4787,2540
chr6:33286821-33288312	chr6_dbb_hap3	+	4568276	4569120	False	NM_001145338,NM_001350,NM_172208,NM_001185181,NM_005453,NM_172209,NM_001141970,NM_003190,NM_001141969	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,TAPBP,PFDN6,ZBTB22,TAPBP,DAXX,TAPBP,DAXX	-1233,3050,-4789,-29599,-1440,-4789,3050,-4789,3050
chr4:81308104-81308401	chr4	+	81308146	81308318	True	NM_001145794,NM_152770	chr4,chr4	-,+	ANTXR2,C4orf22	-313669,-51323
chr9:112295078-112295326	chr9	+	112295123	112295199	True	NM_002829,NM_001037293	chr9,chr9	-,+	PTPN3,PALM2	-34530,107868
chr2:107148858-107149654	chr2	+	107149160	107149576	True	NM_001144013,NR_003506	chr2,chr2	-,+	RGPD3,PLGLA	-64359,-146442
chr2:219723451-219723657	chr2	+	219723483	219723641	True	NM_017431,NM_006522	chr2,chr2	-,+	PRKAG3,WNT6	-26971,904
chr17:6752947-6754219	chr17	+	6753254	6754064	True	NM_053285,NR_002710	chr17,chr17	-,+	TEKT1,ALOX12P2	-18194,2830
chr17:41622460-41622668	chr17	+	41622470	41622655	True	NM_001079675,NM_004941,NM_001986	chr17,chr17,chr17	-,+,-	ETV4,DHX8,ETV4	1157,-61187,700
chr6:12290571-12291664	chr6	+	12290755	12291662	True	NM_001168319,NM_032744,NM_001955	chr6,chr6,chr6	+,-,+	EDN1,C6orf105,EDN1	-277,-511475,-277
chr19:41257404-41257784	chr19	+	41257470	41257828	True	NM_198476,NM_004596	chr19,chr19	-,+	C19orf54,SNRPA	-1642,-764
chr15:74830125-74830852	chr15	+	74830210	74830773	True	NM_006465,NM_201265	chr15,chr15	+,-	ARID3B,UBL7	2774,-76681
chr20:57521680-57523239	chr20	+	57522112	57523262	True	NM_001336,NM_198976	chr20,chr20	-,+	CTSZ,TH1L	59097,33048
chr22:30866050-30867712	chr22	+	30866180	30867522	True	NM_174975,NM_016498	chr22,chr22	-,+	SEC14L3,MTFP1	562,-44620
chr17:9942922-9943872	chr17	+	9943011	9943839	True	NM_201432,NM_004246	chr17,chr17	-,+	GAS7,GLP2R	-2947,-213681
chr13:33591973-33593577	chr13	+	33592075	33593618	True	NM_004795,NM_178007	chr13,chr13	+,-	KL,STARD13	-1555,166648
chr17:19652447-19653931	chr17	+	19652596	19653808	True	NM_000382,NM_001135168,NM_001135167,NM_000691	chr17,chr17,chr17,chr17	+,-,-,-	ALDH3A2,ALDH3A1,ALDH3A1,ALDH3A1	-100583,-3824,-3671,-850
chr14:79746409-79746672	chr14	+	79746538	79746658	True	NM_001007023,NM_001105250,NM_138970	chr14,chr14,chr14	-,+,+	DIO2,NRXN3,NRXN3	931235,-935,-935
chr3:151987322-151987729	chr3	+	151987338	151987780	True	NR_027038,NM_021038,NM_207292,NR_027037	chr3,chr3,chr3,chr3	-,+,+,-	LOC401093,MBNL1,MBNL1,LOC401093	37,-1567,-1567,37
chr2:44498378-44499668	chr2	+	44498411	44499543	True	NM_001042385,NM_000341	chr2,chr2	-,+	PREPL,SLC3A1	87395,3053
chr17:18162410-18162736	chr17	+	18162409	18162489	True	NM_001144900,NM_148886,NM_002018,NM_139162	chr17,chr17,chr17,chr17	+,+,-,+	SMCR7,SMCR7,FLII,SMCR7	1358,1934,-354,1358
chr20:62496870-62497099	chr20	+	62496975	62497067	True	NM_080622,NM_025224,NM_199359,NM_003288,NM_199363,NM_199362,NM_199361,NM_199360	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,-,+,+,+,+,+,+	ABHD16B,ZBTB46,TPD52L2,TPD52L2,TPD52L2,TPD52L2,TPD52L2,TPD52L2	-4460,-60119,-436,-436,-436,-436,-436,-436
chr3:38683200-38683542	chr3	+	38683206	38683526	True	NM_001160161,NM_001160160,NM_000335,NM_001099405,NM_001099404,NM_005107,NM_198056	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,-,+,-	SCN5A,SCN5A,SCN5A,SCN5A,SCN5A,EXOG,SCN5A	7688,7688,7687,7687,7687,-145494,7687
chr6:133007509-133008502	chr6	+	133007670	133008529	True	NM_175067,NM_004666	chr6,chr6	+,-	TAAR6,VNN1	-116261,26716
chr19:4278208-4278846	chr19	+	4278245	4278893	True	NM_001169126,NM_020209	chr19,chr19	-,+	TMIGD2,SHD	23585,60
chr7:139476412-139476782	chr7	+	139476417	139476773	True	NM_001166254,NM_022740,NM_001130966,NM_001113239	chr7,chr7,chr7,chr7	+,-,+,-	TBXAS1,HIPK2,TBXAS1,HIPK2	1273,970,1273,970
chr19:15573987-15574652	chr19	+	15574213	15574623	True	NM_022904,NR_031716	chr19,chr19	-,+	RASAL3,MIR1470	809,-13906
chr8:103872649-103873614	chr8	+	103872891	103873435	True	NM_015878,NM_148174,NM_001695	chr8,chr8,chr8	-,-,+	AZIN1,AZIN1,ATP6V1C1	3022,3022,159812
chr17:38377923-38379013	chr17	+	38378182	38378902	True	NM_133264,NM_021724	chr17,chr17	+,-	WIPF2,NR1D1	-2668,-121209
chr17:38377923-38379013	chr17	+	38379272	38379587	False	NM_133264,NM_021724	chr17,chr17	+,-	WIPF2,NR1D1	-3758,-122299
chr9:35687641-35689083	chr9	+	35687703	35689012	True	NM_001216,NM_003289,NM_213674	chr9,chr9,chr9	+,-,-	CA9,TPM2,TPM2	-13841,1092,1092
chr17:900785-901478	chr17	+	900784	901474	True	NM_013337,NM_022463	chr17,chr17	+,-	TIMM22,NXN	-478,-17774
chr17:46970283-46970789	chr17	+	46970339	46970749	True	NM_005175,NM_001002027,NM_007241	chr17,chr17,chr17	+,+,-	ATP5G1,ATP5G1,SNF8	-242,-242,51461
chr9:130060751-130061450	chr9	+	130060791	130061284	True	NM_032293,NR_002449	chr9,chr9	+,-	GARNL3,SNORA65	-34097,149689
chr13:52598796-52599434	chr13	+	52598845	52599427	True	NM_001005918,NM_021645	chr13,chr13	-,+	ATP7B,UTP14C	-13215,-70
chr12:98910088-98910678	chr12	+	98910153	98910541	True	NM_001032284,NM_001032283,NR_027157,NM_003276	chr12,chr12,chr12,chr12	+,+,-,+	TMPO,TMPO,LOC100128191,TMPO	-853,-853,-149,-853
chrX:40134628-40136561	chrX	+	40134672	40136460	True	NM_001123384,NM_005765	chrX,chrX	-,+	BCOR,ATP6AP2	-98090,303755
chr14:96858655-96859091	chr14	+	96858768	96859006	True	NM_152327,NM_018036	chr14,chr14	+,-	AK7,ATG2B	-371,-29090
chr5:64860648-64861239	chr5	+	64860664	64861261	True	NM_015342,NM_022145	chr5,chr5	+,-	PPWD1,CENPK	-1592,-1669
chr15:25489025-25489227	chr15	+	25489099	25489251	True	NR_003344,NR_003358,NM_130838,NR_003353,NR_003352,NR_003351,NR_003350,NR_003357,NR_003356,NR_003355,NR_003354,NR_003302,NR_003303,NR_003359	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,-,+,+,+,+,+,+,+,+,+,+,+	SNORD115-29,SNORD115-43,UBE3A,SNORD115-38,SNORD115-37,SNORD115-36,SNORD115-35,SNORD115-42,SNORD115-41,SNORD115-40,SNORD115-39,SNORD115-10,SNORD115-11,SNORD115-44	5093,5093,161452,-4165,-6017,5093,-9756,3240,1373,-389,-2257,3240,5093,6754
chr3:194090753-194091363	chr3	+	194090853	194091156	True	NM_130830,NM_001135057,NR_033929	chr3,chr3,chr3	-,-,+	LRRC15,LRRC15,FLJ34208	-381,-381,116712
chr17:79446795-79447632	chr17	+	79446977	79447601	True	NM_001077182,NR_036152	chr17,chr17	+,-	FSCN2,MIR3186	47815,-28763
chr3:157822175-157822867	chr3	+	157822175	157822783	True	NM_001163678,NM_003030,NM_006884,NM_016625	chr3,chr3,chr3,chr3	-,-,-,+	SHOX2,SHOX2,SHOX2,RSRC1	1225,1225,1225,5108
chr19:6135126-6136261	chr19	+	6135304	6135958	True	NM_134433,NM_030924	chr19,chr19	-,+	RFX2,ACSBG2	-24640,27
chr1:1849203-1849496	chr1	+	1849264	1849492	True	NM_138705,NM_178545	chr1,chr1	+,-	CALML6,TMEM52	-3049,1298
chr5:169724353-169724625	chr5	+	169724360	169724546	True	NM_005565,NR_026945	chr5,chr5	-,+	LCP2,LOC257358	326,33888
chr7:32981352-32981740	chr7	+	32981396	32981764	True	NM_007270,NR_003500	chr7,chr7	+,-	FKBP9,RP9P	15240,1068
chr1:161086744-161087606	chr1	+	161086931	161087411	True	NM_001185094,NM_012394,NM_001185092,NM_005600,NM_001185093	chr1,chr1,chr1,chr1,chr1	+,-,+,+,+	NIT1,PFDN2,NIT1,NIT1,NIT1	496,505,450,450,495
chr1:45986874-45987089	chr1	+	45986992	45987136	True	NM_181696,NM_002574,NM_001202431,NM_015506,NM_181697	chr1,chr1,chr1,chr1,chr1	-,-,-,+,-	PRDX1,PRDX1,PRDX1,MMACHC,PRDX1	524,524,1476,-21187,524
chr11:60525061-60526030	chr11	+	60525227	60526071	True	NM_152717,NM_001098835,NM_004778	chr11,chr11,chr11	+,+,-	MS4A15,MS4A15,GPR44	-938,-938,97430
chr4:108912194-108913991	chr4	+	108912252	108913866	True	NM_005327,NM_001166119,NM_001184705	chr4,chr4,chr4	+,-,+	HADH,LEF1,HADH	-1433,174146,-1433
chr16:29875196-29875545	chr16	+	29875250	29875542	True	NM_006319,NR_024370,NR_015396	chr16,chr16,chr16	-,+,+	CDIPT,LOC440356,LOC440356	-672,-297,-146
chr11:73657610-73659254	chr11	+	73657616	73658791	True	NM_153614,NM_003355	chr11,chr11	+,-	DNAJB13,UCP2	2572,35159
chr19:55661470-55662146	chr19	+	55661697	55662183	True	NM_017729,NM_001126132,NM_001126133,NM_000363,NM_003283	chr19,chr19,chr19,chr19,chr19	+,-,-,-,-	EPS8L1,TNNT1,TNNT1,TNNI3,TNNT1	-69988,-1091,-1091,6967,-1091
chr22:46067763-46067991	chr22	+	46067885	46068033	True	NM_001167621,NM_148674,NM_013236	chr22,chr22,chr22	+,-,+	ATXN10,SMC1B,ATXN10	-258,-258385,-258
chr16:53538798-53540555	chr16	+	53539048	53540186	True	NM_022476,NM_001012398,NM_005611	chr16,chr16,chr16	-,-,+	AKTIP,AKTIP,RBL2	-1878,-1878,-70748
chr16:85219930-85220732	chr16	+	85220446	85220558	True	NR_033984,NM_198491	chr16,chr16	+,-	LOC400548,FAM92B	-49749,-74332
chr11:104965034-104966247	chr11	+	104965042	104966261	True	NM_001007232,NM_001223,NM_033294,NM_033295,NM_001077244,NM_033292,NM_033293	chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,+,-,-	CARD17,CASP1,CASP1,CASP1,GRIA4,CASP1,CASP1	5957,5957,5957,5957,514538,5957,5957
chr4:73435828-73436657	chr4	+	73435861	73436682	True	NM_053036,NM_014243	chr4,chr4	+,-	NPFFR2,ADAMTS3	-531063,-1345
chr12:57853310-57853512	chr12	+	57853368	57853550	True	NM_001167609,NM_001080156,NM_031479,NM_005269,NM_001160045	chr12,chr12,chr12,chr12,chr12	+,-,+,+,+	GLI1,ARHGAP9,INHBE,GLI1,GLI1	383,18228,-4323,383,367
chr11:111413491-111413878	chr11	+	111413497	111413903	True	NM_178834,NM_017589	chr11,chr11	+,-	LAYN,BTG4	-2316,-30433
chr1:178993825-178994821	chr1	+	178993825	178994505	True	NM_014864,NM_001136000	chr1,chr1	+,-	FAM20B,ABL2	568,117769
chr4:1106807-1107078	chr4	+	1106934	1107068	True	NM_001193318,NR_033768,NM_001131034,NM_021923,NM_194439	chr4,chr4,chr4,chr4,chr4	-,-,-,+,-	RNF212,TMED11P,RNF212,FGFRL1,RNF212	334,9934,334,-100733,334
chr8:110690285-110691464	chr8	+	110690458	110691460	True	NM_001099746,NM_001099745,NM_004215	chr8,chr8,chr8	-,-,+	SYBU,SYBU,EBAG9	1829,1829,-138211
chr4:123843459-123843665	chr4	+	123843566	123843654	True	NM_198041,NM_007083,NM_145207	chr4,chr4,chr4	-,-,+	NUDT6,NUDT6,SPATA5	519,155,570
chr11:65629533-65630967	chr11	+	65629665	65630361	True	NM_025128,NM_005507	chr11,chr11	+,-	MUS81,CFL1	-1845,-3861
chr14:31848615-31849459	chr14	+	31848748	31849473	True	NM_025152,NM_015473	chr14,chr14	+,-	NUBPL,HEATR5A	181117,40365
chr12:122110765-122111036	chr12	+	122110956	122111030	True	NM_001080825,NM_173855	chr12,chr12	+,-	TMEM120B,MORN3	39627,-3396
chr11:93526375-93527882	chr11	+	93526569	93527921	True	NM_024116,NM_004268	chr11,chr11	-,+	TAF1D,MED17	-51866,-9223
chr1:39178629-39180592	chr1	+	39178628	39180450	True	NM_001136275,NM_022157	chr1,chr1	+,-	AKIRIN1,RRAGC	276465,144940
chr16:126455-126846	chr16	+	126562	126841	True	NM_001015052,NM_022450,NM_002434,NM_001015054	chr16,chr16,chr16,chr16	+,-,+,+	MPG,RHBDF1,MPG,MPG	1327,-3933,1327,176
chr7:130419558-130421218	chr7	+	130419646	130421190	True	NM_138693,NR_029899	chr7,chr7	-,+	KLF14,MIR335	-758,-283756
chr1:244213182-244213589	chr1	+	244213238	244213588	True	NM_005465,NM_006352,NM_205768	chr1,chr1,chr1	-,+,+	AKT3,ZNF238,ZNF238	-206685,2993,972
chr17:30469936-30470212	chr17	+	30470010	30470220	True	NM_001033566,NR_002222,NM_018307,NM_001033568	chr17,chr17,chr17,chr17	+,-,+,+	RHOT1,ARGFXP2,RHOT1,RHOT1	-588,8420,-588,-588
chr18:8610319-8610530	chr18	+	8610342	8610548	True	NM_001025300,NR_024419	chr18,chr18	+,-	RAB12,LOC100192426	-950,-243310
chr2:136504840-136506460	chr2	+	136504967	136506047	True	NM_002299,NM_014607	chr2,chr2	-,+	LCT,UBXN4	88754,-5830
chr15:88801106-88801463	chr15	+	88801266	88801399	True	NM_002530,NM_001012338,NM_022839,NM_001007156	chr15,chr15,chr15,chr15	-,-,+,-	NTRK3,NTRK3,MRPS11,NTRK3	-1605,-1605,209284,-1605
chr17:26124905-26125258	chr17	+	26124961	26125226	True	NM_000625,NR_024043	chr17,chr17	-,+	NOS2,LGALS9	2380,-166845
chr15:64338427-64338649	chr15	+	64338457	64338683	True	NM_003099,NM_014326	chr15,chr15	+,-	SNX1,DAPK2	49493,54
chr22:25366094-25367015	chr22	+	25366213	25366909	True	NM_001145206,NM_001001663	chr22,chr22	+,-	KIAA1671,TMEM211	57031,-30899
chr4:115988234-115989827	chr4	+	115988248	115989523	True	NM_022569,NR_030303	chr4,chr4	-,+	NDST4,MIR577	45566,-410384
chr11:66204827-66205199	chr11	+	66204852	66205040	True	NM_170739,NM_170738,NM_178864,NM_016050	chr11,chr11,chr11,chr11	-,-,+,-	MRPL11,MRPL11,NPAS4,MRPL11	1320,1320,-16429,1320
chr14:98611038-98612090	chr14	+	98611348	98612122	True	NR_015430,NM_182560	chr14,chr14	-,+	C14orf64,C14orf177	-166887,565827
chr3:124310196-124311071	chr3	+	124310281	124310880	True	NM_007064,NM_002213	chr3,chr3	+,-	KALRN,ITGB5	-6826,295321
chr3:48229878-48230278	chr3	+	48229929	48230245	True	NM_001789,NM_004345,NM_201567	chr3,chr3,chr3	-,+,-	CDC25A,CAMP,CDC25A	-128,34616,-128
chr2:47053769-47054240	chr2	+	47053803	47054177	True	NR_024452,NM_001171506	chr2,chr2	+,-	LOC100134259,MCFD2	825,88880
chr6:26596402-26596774	chr6	+	26596409	26596779	True	NM_013375,NM_024639	chr6,chr6	+,-	ABT1,ZNF322A	400,63234
chr13:50571700-50572321	chr13	+	50571854	50572352	True	NM_005798,NM_052811,NR_037407,NM_001007278,NM_213590	chr13,chr13,chr13,chr13,chr13	+,+,-,+,+	TRIM13,TRIM13,MIR3613,TRIM13,TRIM13	-770,-770,-1217,-770,-770
chr1:180882863-180884796	chr1	+	180883198	180884642	True	NM_020950,NM_005819	chr1,chr1	+,-	KIAA1614,STX6	-941,107454
chr11:2227883-2229608	chr11	+	2227908	2229383	True	NM_199293,NR_028044	chr11,chr11	-,+	TH,IGF2AS	-34873,-66208
chr6:149072013-149072546	chr6	+	149072027	149072534	True	NM_207360,NM_005715	chr6,chr6	-,+	ZC3H12D,UST	733664,-3807
chr1:16399615-16399875	chr1	+	16399627	16399687	True	NM_182623,NM_001165945	chr1,chr1	-,+	FAM131C,CLCNKB	490,-24394
chr2:119607083-119607623	chr2	+	119607340	119607600	True	NM_001426,NM_006770	chr2,chr2	-,+	EN1,MARCO	-1581,92144
chr1:12121379-12123306	chr1	+	12121542	12123146	True	NM_001243,NM_138346	chr1,chr1	+,-	TNFRSF8,KIAA2013	287,-135057
chr12:13194792-13195148	chr12	+	13194791	13195182	True	NM_015987,NM_020853	chr12,chr12	-,+	HEBP1,KIAA1467	-41548,2132
chr16:2060610-2060817	chr16	+	2060617	2060737	True	NM_178167,NM_001099456	chr16,chr16	-,+	ZNF598,NPW	-854,8783
chr6:74161857-74162172	chr6	+	74161926	74162148	True	NM_001123226,NM_012123,NM_133645,NM_138441	chr6,chr6,chr6,chr6	+,+,+,-	MTO1,MTO1,MTO1,MB21D1	9305,9305,9305,-33
chr14:65015449-65016645	chr14	+	65015449	65016545	True	NM_006977,NM_021979,NM_172365	chr14,chr14,chr14	-,+,+	ZBTB25,HSPA2,C14orf50	-44895,-8314,74
chr4:26484385-26486299	chr4	+	26484517	26486266	True	NM_000730,NM_018317	chr4,chr4	-,+	CCKAR,TBC1D19	5833,99279
chr1:153651145-153651448	chr1	+	153651210	153651360	True	NM_004515,NM_000906	chr1,chr1	-,+	ILF2,NPR1	-7731,-97
chr9:100158216-100158759	chr9	+	100158282	100158808	True	NR_026847,NM_014290	chr9,chr9	-,+	LOC286359,TDRD7	215,15493
chr9:140320131-140321371	chr9	+	140320137	140321179	True	NM_006647,NM_017820	chr9,chr9	+,-	NOXA1,EXD3	-2341,-2423
chr3:126193800-126194093	chr3	+	126193799	126194053	True	NM_001040653,NM_025112,NM_152889	chr3,chr3,chr3	-,-,+	ZXDC,ZXDC,CHST13	759,759,49122
chr12:48494268-48494923	chr12	+	48494442	48494797	True	NM_014554,NM_001166686	chr12,chr12	-,+	SENP1,PFKM	4903,4858
chr10:2007308-2008951	chr10	+	2007385	2008967	True	NR_033387,NM_018702	chr10,chr10	+,-	NCRNA00168,ADARB2	-438611,-227667
chr8:22089442-22089702	chr8	+	22089528	22089694	True	NM_001722,NM_001099335,NM_014759	chr8,chr8,chr8	+,-,-	POLR3D,PHYHIP,PHYHIP	12924,207,207
chr3:160115600-160116794	chr3	+	160115956	160116733	True	NR_029525,NM_001002800,NR_029663,NM_020800,NM_005496,NM_001190241	chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,-,+,-	MIR16-2,SMC4,MIR15B,IFT80,SMC4,IFT80	5799,696,5642,638,1613,638
chr19:10736372-10736592	chr19	+	10736443	10736631	True	NM_020428,NR_024333	chr19,chr19	+,-	SLC44A2,LOC147727	-323,27967
chr1:2126546-2126765	chr1	+	2126585	2126704	True	NM_003036,NM_182533,NR_024445	chr1,chr1,chr1	+,-,-	SKI,C1orf86,LOC100128003	33429,-371,-1561
chr11:55738862-55740135	chr11	+	55738886	55740171	True	NM_001005491,NM_001001921	chr11,chr11	-,+	OR10AG1,OR5AS1	-2947,57723
chr1:25780008-25781063	chr1	+	25780260	25780885	True	NM_018202,NM_138618	chr1,chr1	+,-	TMEM57,RHCE	-22932,-32897
chr18:75697374-75697593	chr18	+	75697420	75697612	True	NM_001480,NM_001025100	chr18,chr18	+,-	GALR1,MBP	-735470,-852646
chr2:122493972-122494235	chr2	+	122493975	122494199	True	NM_032390,NM_004622	chr2,chr2	-,+	MKI67IP,TSN	354,18921
chr6:131470679-131472604	chr6	+	131470814	131472525	True	NM_001431,NM_016377	chr6,chr6	-,+	EPB41L2,AKAP7	-86352,-4404
chr6:108616667-108616943	chr6	+	108616671	108616990	True	NM_145315,NM_152827	chr6,chr6	+,-	LACE1,SNX3	-624,-34207
chr12:16751848-16752092	chr12	+	16751848	16752065	True	NM_018640,NM_001001395,NM_145764	chr12,chr12,chr12	-,-,+	LMO3,LMO3,MGST1	7427,9020,-245555
chr11:5650226-5650978	chr11	+	5650653	5650937	True	NM_130390,NM_033034,NM_021616,NM_001003827	chr11,chr11,chr11,chr11	+,-,+,+	TRIM34,TRIM5,TRIM34,TRIM34	2547,55452,-4505,-9538
chr1:24035903-24036341	chr1	+	24035902	24036338	True	NM_001199802,NM_001127621	chr1,chr1	+,-	RPL11,GALE	-17684,89772
chr11:64066484-64066756	chr11	+	64066591	64066661	True	NM_004451,NM_001039496,NM_032989,NM_033310	chr11,chr11,chr11,chr11	+,+,-,+	ESRRA,C11orf20,BAD,KCNK4	6382,1201,-14415,-7856
chr9:94715029-94716494	chr9	+	94715138	94716460	True	NR_015444,NM_004560	chr9,chr9	+,-	LOC100128076,ROR2	178655,-2694
chr6:43483641-43484421	chr6	+	43483753	43484353	True	NM_004875,NM_001012974,NM_203290,NM_015388	chr6,chr6,chr6,chr6	+,-,+,-	POLR1C,C6orf154,POLR1C,YIPF3	437,-5329,423,425
chr5:137901200-137901594	chr5	+	137901200	137901411	True	NM_001964,NR_002913,NM_004134	chr5,chr5,chr5	+,-,-	EGR1,SNORD63,HSPA9	-100080,-4401,9966
chr21:41118161-41119049	chr21	+	41118511	41118969	True	NR_026543,NM_001080444	chr21,chr21	-,+	C21orf88,IGSF5	-133762,-1229
chr1:52604257-52604892	chr1	+	52604299	52604948	True	NM_015913,NM_007324,NM_007323,NM_004799	chr1,chr1,chr1,chr1	-,+,+,+	TXNDC12,ZFYVE9,ZFYVE9,ZFYVE9	-83252,3097,3097,3097
chr10:99185622-99185964	chr10	+	99185769	99185985	True	NM_002629,NM_016046	chr10,chr10	+,-	PGAM1,EXOSC1	41,19833
chr1:161130993-161131535	chr1	+	161131008	161131454	True	NM_016406,NM_001122764,NM_012475,NM_000309,NM_001199873,NM_001014443	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,-,+	UFC1,PPOX,USP21,PPOX,B4GALT3,USP21	-7525,4726,-1805,4726,16354,-1805
chr8:77595331-77595559	chr8	+	77595350	77595464	True	NR_024360,NM_024721	chr8,chr8	-,+	LOC100192378,ZFHX4	96,-1886
chr7:23626090-23626977	chr7	+	23626119	23626772	True	NM_138771,NR_002711	chr7,chr7	+,-	CCDC126,CLK2P	10225,17
chr1:60288712-60289970	chr1	+	60289175	60289782	True	NM_000775,NM_015888	chr1,chr1	-,+	CYP2J2,HOOK1	102699,-8700
chr9:124030845-124031046	chr9	+	124030897	124031037	True	NM_198252,NM_001127663,NM_001127662,NM_016322,NM_001127667,NM_001127666,NM_001127665,NM_001127664	chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9	+,+,+,-,+,+,+,+	GSN,GSN,GSN,RAB14,GSN,GSN,GSN,GSN	-568,-568,-568,-66532,-568,-568,-568,-568
chr8:124409403-124410561	chr8	+	124409579	124410116	True	NM_018024,NM_014109	chr8,chr8	+,-	WDYHV1,ATAD2	18848,-874
chr11:111783583-111783872	chr11	+	111783596	111783872	True	NR_037651,NM_001885,NM_080659,NM_001541	chr11,chr11,chr11,chr11	+,-,+,+	HSPB2-C11ORF52,CRYAB,C11orf52,HSPB2	-187,-1123,5728,-187
chr1:222756578-222757034	chr1	+	222756650	222756862	True	NM_001201536,NM_139352,NM_198551,NM_005681	chr1,chr1,chr1,chr1	-,-,+,-	TAF1A,TAF1A,MIA3,TAF1A	6469,6469,34581,6469
chr18:11378325-11378675	chr18	+	11378412	11378549	True	NM_022068,NM_182978	chr18,chr18	-,+	FAM38B,GNAL	-229651,310586
chr1:151483093-151483503	chr1	+	151483185	151483467	True	NM_145796,NM_020770	chr1,chr1	-,+	POGZ,CGN	-51244,394
chr8:74827268-74827799	chr8	+	74827428	74827760	True	NM_001040613,NM_018299	chr8,chr8	+,-	TMEM70,UBE2W	60616,-36318
chr22:19132821-19133908	chr22	+	19132869	19133929	True	NM_005315,NM_053006,NM_022719	chr22,chr22,chr22	-,+,-	GSC2,TSSK2,DGCR14	3917,-14607,-679
chr19:50142406-50143168	chr19	+	50142715	50143123	True	NM_006270,NM_021228	chr19,chr19	-,+	RRAS,SCAF1	327,2258
chr1:2564757-2564996	chr1	+	2564779	2564995	True	NM_033467,NM_152371	chr1,chr1	-,+	MMEL1,C1orf93	-298,-46641
chr9:102818844-102820650	chr9	+	102818955	102820324	True	NM_015051,NM_014425	chr9,chr9	-,+	ERP44,INVS	41067,41186
chr3:20081060-20081583	chr3	+	20081155	20081632	True	NM_003884,NR_027694	chr3,chr3	+,-	KAT2B,C3orf48	-101,-27390
chr18:3410047-3410527	chr18	+	3410107	3410549	True	NM_019856,NM_174886	chr18,chr18	-,+	MYOM1,TGIF1	-190001,1522
chr17:49196317-49197473	chr17	+	49196670	49197391	True	NM_001130528,NM_001018136,NM_003971	chr17,chr17,chr17	-,+,-	SPAG9,NME1-NME2,SPAG9	885,33505,885
chr8:146125711-146126087	chr8	+	146125788	146126136	True	NM_001109689,NM_021061,NM_003416	chr8,chr8,chr8	-,-,+	ZNF250,ZNF250,ZNF7	760,760,-72936
chr2:37419128-37419542	chr2	+	37419148	37419573	True	NR_037880,NR_037879,NM_001032377	chr2,chr2,chr2	+,+,-	LOC100505876,LOC100505876,SULT6B1	4061,4061,-3458
chr1:165600571-165600841	chr1	+	165600581	165600812	True	NM_004528,NR_026744	chr1,chr1	+,-	MGST3,LOC400794	-182,-49240
chr7:56172897-56173751	chr7	+	56172954	56173768	True	NM_015411,NM_016139	chr7,chr7	+,-	SUMF2,CHCHD2	-41100,469
chr5:139742114-139742609	chr5	+	139742212	139742544	True	NM_001945,NM_031467	chr5,chr5	-,+	HBEGF,SLC4A9	-16024,-2476
chr12:46765393-46765613	chr12	+	46765395	46765621	True	NM_152641,NM_018976	chr12,chr12	+,-	ARID2,SLC38A2	-641826,1074
chr19:58336585-58336815	chr19	+	58336591	58336654	True	NR_024162,NM_001204818	chr19,chr19	-,+	FKBP1AP1,LOC100293516	2229,5007
chr17:58757353-58758783	chr17	+	58757543	58758521	True	NM_017679,NM_001099432,NM_006380	chr17,chr17,chr17	+,+,-	BCAS3,BCAS3,APPBP2	-2439,-2439,-153963
chr2:133047047-133048035	chr2	+	133047060	133047859	True	NM_001508,NR_027020	chr2,chr2	+,-	GPR39,ANKRD30BL	126287,-31518
chr14:100536283-100537034	chr14	+	100536627	100537001	True	NM_016337,NM_206918	chr14,chr14	+,-	EVL,DEGS2	-4931,89061
chr9:35590631-35592264	chr9	+	35591006	35592290	True	NM_001782,NM_001164310,NM_006285	chr9,chr9,chr9	-,-,+	CD72,FAM166B,TESK1	26184,-27110,12990
chr1:154576801-154578608	chr1	+	154576993	154578115	True	NM_015841,NM_015840,NM_001193495,NM_000748,NM_001111	chr1,chr1,chr1,chr1,chr1	-,-,-,+,-	ADAR,ADAR,ADAR,CHRNB2,ADAR	2659,2659,711,-36788,2659
chr13:101188609-101190128	chr13	+	101188890	101190078	True	NM_001178004,NM_033110	chr13,chr13	+,-	PCCA,A2LD1	-447673,-2834
chr9:103244104-103245633	chr9	+	103244397	103245505	True	NM_003692,NM_017746	chr9,chr9	+,-	TMEFF1,TEX10	-8934,-129138
chr6:34207431-34208631	chr6	+	34207493	34208509	True	NM_001008704,NM_002131,NM_145899,NM_178508,NM_001008703,NM_145902,NM_145903,NM_145901,NM_145905	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,+,+,-,-,+,+,+,+	C6orf1,HMGA1,HMGA1,C6orf1,C6orf1,HMGA1,HMGA1,HMGA1,HMGA1	8446,-2967,-2967,8446,8446,-2894,-2967,-2894,-976
chr2:68591794-68592592	chr2	+	68591970	68592622	True	NM_015463,NM_002664	chr2,chr2	-,+	CNRIP1,PLEK	-44787,13
chr8:74884045-74884276	chr8	+	74884078	74884296	True	NM_001204858,NM_001204859,NM_001204857,NM_017866,NM_005648,NR_033334,NM_001204863,NM_001204862,NM_001204861,NM_001204860,NM_001204864,NM_001040613	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,+,-,+,-,-,-,-,-,+	TCEB1,TCEB1,TCEB1,TMEM70,TCEB1,TMEM70,TCEB1,TCEB1,TCEB1,TCEB1,TCEB1,TMEM70	276,276,276,4080,276,4080,276,51,51,276,276,4080
chr3:45871017-45871905	chr3	+	45871293	45871933	True	NM_020347,NM_006641	chr3,chr3	-,+	LZTFL1,CCR9	11738,56062
chr17:33288900-33289323	chr17	+	33288994	33289235	True	NM_006584,NM_052857,NM_001193530,NM_001193529	chr17,chr17,chr17,chr17	-,+,-,-	CCT6B,ZNF830,CCT6B,CCT6B	-466,-496,-466,-466
chr15:40641723-40642047	chr15	+	40641748	40642013	True	NM_001145643,NM_207380,NM_033510	chr15,chr15,chr15	+,-,+	PHGR1,C15orf52,DISP2	1220,-8580,8420
chr8:143851597-143852083	chr8	+	143851715	143851897	True	NM_177477,NM_177476,NM_177457,NM_177458,NM_016647,NM_023946	chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,+,-	LYNX1,LYNX1,LYNX1,LYNX1,C8orf55,LYNX1	6897,6590,7793,-469,-43145,7792
chr16:2656301-2656999	chr16	+	2656356	2657024	True	NR_036139,NR_015441	chr16,chr16	-,+	MIR3178,LOC652276	-74350,-3023
chr16:2656301-2656999	chr16	+	2735604	2736272	False	NM_031948,NM_018992	chr16,chr16	-,+	PRSS27,KCTD5	34330,-3161
chr3:109055578-109055838	chr3	+	109055684	109055746	True	NM_018189,NM_001145553	chr3,chr3	-,+	DPPA4,FLJ25363	723,73090
chr7:150037614-150038040	chr7	+	150037668	150038004	True	NM_138434,NM_002889	chr7,chr7	+,-	C7orf29,RARRES2	-10781,809
chr19:6426613-6427023	chr19	+	6426618	6427038	True	NM_139161,NM_003685,NM_173637	chr19,chr19,chr19	+,-,-	CRB3,KHSRP,SLC25A41	37221,-1796,6802
chr3:108033441-108033854	chr3	+	108033474	108033869	True	NM_007072,NM_018010	chr3,chr3	+,-	HHLA2,IFT57	-12193,-92057
chr12:13046021-13046778	chr12	+	13046179	13046652	True	NM_018654,NM_003979	chr12,chr12	-,+	GPRC5D,GPRC5A	56717,-2274
chr5:174872253-174872948	chr5	+	174872353	174872753	True	NM_022754,NM_000794	chr5,chr5	+,-	SFXN1,DRD1	32760,-1190
chr8:63190529-63191109	chr8	+	63190535	63190872	True	NM_173688,NM_001164756	chr8,chr8	+,-	NKAIN3,ASPH	-29085,-563336
chr3:43359176-43360238	chr3	+	43359426	43360250	True	NM_017719,NM_032806	chr3,chr3	+,-	SNRK,C3orf39	-31473,-211861
chr20:1447543-1449186	chr20	+	1447847	1449092	True	NM_182483,NM_016143,NM_014723,NM_018839	chr20,chr20,chr20,chr20	-,-,+,-	NSFL1C,NSFL1C,SNPH,NSFL1C	-47,-47,-200938,-47
chr22:20792818-20793067	chr22	+	20792865	20792977	True	NM_182895,NM_153334,NR_003253	chr22,chr22,chr22	-,-,+	SCARF2,SCARF2,ZNF74	-719,-719,-44436
chr10:75331539-75332269	chr10	+	75331684	75332307	True	NM_152586,NM_004922	chr10,chr10	-,+	USP54,SEC24C	3176,171823
chr9:23823089-23824143	chr9	+	23823278	23824171	True	NM_022160,NM_004432,NM_001171197,NM_001171195	chr9,chr9,chr9,chr9	+,-,-,-	DMRTA1,ELAVL2,ELAVL2,ELAVL2	-1376492,1943,-1800,-1435
chr19:6591285-6591820	chr19	+	6591398	6591862	True	NM_001252,NM_003811	chr19,chr19	-,+	CD70,TNFSF9	-235,-60445
chr13:100149979-100150799	chr13	+	100150372	100150726	True	NM_004951,NM_004800	chr13,chr13	-,+	GPR183,TM9SF2	-190623,3001
chr7:75156166-75156752	chr7	+	75156365	75156613	True	NM_001099435,NR_028059	chr7,chr7	+,-	SPDYE5,PMS2P3	-32118,890
chr6:70992140-70992783	chr6	+	70992287	70992473	True	NM_078485,NM_001105531	chr6,chr6	-,+	COL9A1,FAM135A	488,130633
chr5:64858983-64859184	chr5	+	64859090	64859172	True	NM_015342,NM_022145	chr5,chr5	+,-	PPWD1,CENPK	-10,-95
chrX:100548165-100548942	chrX	+	100548169	100548662	True	NM_024885,NM_001939,NM_001168474	chrX,chrX,chrX	-,+,-	TAF7L,DRP2,TAF7L	-110,-73287,-1844
chr10:88286321-88286534	chr10	+	88286325	88286491	True	NM_015045,NM_001030015	chr10,chr10	-,+	WAPAL,OPN4	-4784,127822
chr2:7000964-7001697	chr2	+	7001104	7001751	True	NM_207315,NM_080657	chr2,chr2	-,+	CMPK2,RSAD2	4242,16044
chr11:67806801-67807295	chr11	+	67807088	67807329	True	NM_030930,NM_006019,NM_002496,NM_006053	chr11,chr11,chr11,chr11	-,+,+,+	UNC93B1,TCIRG1,NDUFS8,TCIRG1	-35495,-677,-9055,3117
chr4:76551773-76552614	chr4	+	76552393	76552456	True	NM_003948,NM_178497	chr4,chr4	-,+	CDKL2,C4orf26	3318,-71190
chrX:64754578-64754798	chrX	+	64754709	64754836	True	NM_001170650,NM_031206,NM_001170649,NM_001010888	chrX,chrX,chrX,chrX	-,-,-,+	LAS1L,LAS1L,LAS1L,ZC3H12B	-23,-23,-23,-46145
chr17:76611848-76612216	chr17	+	76611895	76612196	True	NM_173628,NM_024419	chr17,chr17	-,+	DNAH17,PGS1	-38419,-237211
chr22:24948594-24950481	chr22	+	24949048	24950482	True	NM_004175,NM_031444	chr22,chr22	+,-	SNRPD3,C22orf13	1135,843
chr3:190583976-190585689	chr3	+	190584257	190585733	True	NR_024343,NM_001146686	chr3,chr3	+,-	SNAR-I,GEMC1	9985,-3792
chr2:102993933-102995623	chr2	+	102994318	102995496	True	NM_003855,NM_032718	chr2,chr2	+,-	IL18R1,MFSD9	-15272,357891
chr2:88666496-88667014	chr2	+	88666637	88666974	True	NM_152670,NM_001135649	chr2,chr2	+,-	C2orf51,FOXI3	157194,85140
chr22:24675709-24676952	chr22	+	24675830	24676826	True	NM_001145468,NM_015330,NM_004121	chr22,chr22,chr22	+,+,-	SPECC1L,SPECC1L,GGT5	-9095,-9095,-34720
chr22:24675709-24676952	chr22	+	25059914	25059964	False	NR_024593,NR_024494	chr22,chr22	-,+	POM121L10P,BCRP3	-4800,-31083
chr8:145201460-145201755	chr8	+	145201624	145201694	True	NM_030974,NM_032450,NM_016458,NM_001099281,NM_001099280	chr8,chr8,chr8,chr8,chr8	-,+,+,+,+	SHARPIN,HEATR7A,FAM203A,HEATR7A,HEATR7A	-42484,1224,-9006,1224,1224
chr8:145201460-145201755	chr8	+	145446832	145446902	False	NM_016458,NM_015201	chr8,chr8	+,-	FAM203A,BOP1	-9006,68268
chr22:41871618-41872131	chr22	+	41871942	41872142	True	NM_032758,NM_001098	chr22,chr22	-,+	PHF5A,ACO2	-7234,-6864
chr3:53925843-53926045	chr3	+	53925893	53926093	True	NM_022899,NM_018725,NM_021237	chr3,chr3,chr3	-,+,-	ACTR8,IL17RB,SELK	-9664,-45367,0
chr20:61193062-61193689	chr20	+	61193579	61193667	True	NR_033263,NR_029676	chr20,chr20	-,+	C20orf200,MIR133A2	-44811,-31511
chr1:173884204-173884533	chr1	+	173884239	173884536	True	NM_001122770,NM_000488	chr1,chr1	+,-	ZBTB37,SERPINC1	-46797,2031
chr21:40178617-40179768	chr21	+	40178814	40179816	True	NR_027065,NM_005239	chr21,chr21	-,+	NCRNA00114,ETS2	-33413,-1023
chr1:65891911-65892976	chr1	+	65891941	65892968	True	NM_001198683,NM_001198681,NM_017526,NR_029516,NM_001003680,NM_001003679,NM_002303	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,-,+,+,+	LEPROT,LEPROT,LEPROT,MIR101-1,LEPR,LEPR,LEPR	-5868,-5600,-5868,-367750,-5664,-5664,-5664
chr1:197721937-197723052	chr1	+	197722359	197722816	True	NM_001195215,NM_001024594	chr1,chr1	-,+	DENND1B,C1orf53	21866,148865
chr1:68858035-68859664	chr1	+	68858099	68859703	True	NM_000329,NM_001924	chr1,chr1	-,+	RPE65,GADD45A	55989,-707290
chr12:23721842-23723218	chr12	+	23722186	23723199	True	NR_030625,NM_178010	chr12,chr12	+,-	MIR920,SOX5	642155,14368
chr13:51706298-51707807	chr13	+	51706647	51707843	True	NR_003923,NM_145019	chr13,chr13	-,+	GUCY1B2,FAM124A	-66354,88663
chr15:73975876-73976132	chr15	+	73975885	73976035	True	NM_025240,NM_001024736,NM_017455	chr15,chr15,chr15	+,+,-	CD276,CD276,NPTN	586,586,-50132
chr1:145942495-145942896	chr1	+	145942496	145942776	True	NR_003377,NM_001097616	chr1,chr1	-,+	PDZK1P1,GPR89C	-9,-58679
chr1:145942495-145942896	chr1	+	147484208	147484420	False	NR_003377,NM_001097616	chr1,chr1	-,+	PDZK1P1,GPR89C	-9,-58692
chr2:98957217-98959180	chr2	+	98957729	98959030	True	NM_001008215,NM_001298,NM_001079878	chr2,chr2,chr2	-,+,+	C2orf64,CNGA3,CNGA3	265975,3587,3587
chr16:81480620-81481006	chr16	+	81480669	81481032	True	NM_001076780,NM_198390	chr16,chr16	-,+	PKD1L2,CMIP	-226694,-1945
chr8:66754285-66754674	chr8	+	66754284	66754446	True	NM_001145838,NM_002604	chr8,chr8	+,-	MTFR1,PDE7A	-172227,-529
chr2:178062531-178062761	chr2	+	178062706	178062770	True	NM_194247,NR_036075	chr2,chr2	+,-	HNRNPA3,MIR3128	14651,58018
chr17:43660792-43661637	chr17_ctg5_hap1	-	1235958	1236792	False	NR_026901,NR_037772	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LOC644172,CRHR1	-47570,-65505
chr17:43660792-43661637	chr17_ctg5_hap1	+	491765	492619	False	NM_001193465,NM_014834	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	KIAA1267,LRRC37A	70878,-33161
chr17:43660792-43661637	chr17	+	43660822	43661666	True	NR_026901,NR_037772	chr17,chr17	-,+	LOC644172,CRHR1	18132,36043
chr5:10376626-10377131	chr5	+	10376638	10377149	True	NM_005885,NM_138809	chr5,chr5	+,-	MARCH6,CMBL	-22863,-68470
chr19:17138010-17138544	chr19	+	17138087	17138457	True	NM_001130065,NM_015692	chr19,chr19	+,-	MYO9B,CPAMD8	48133,-462
chr21:45755789-45756391	chr21	+	45756031	45756379	True	NM_003307,NM_004928	chr21,chr21	+,-	TRPM2,C21orf2	17104,2956
chr12:53346565-53347355	chr12	+	53346703	53347309	True	NM_199187,NM_000224,NM_002273	chr12,chr12,chr12	+,+,-	KRT18,KRT18,KRT8	-4099,-3911,-47835
chr7:31008104-31008751	chr7	+	31008166	31008452	True	NM_001202481,NM_000823	chr7,chr7	-,+	CRHR2,GHRHR	-268447,-4581
chr16:67207931-67208193	chr16	+	67208067	67208237	True	NM_001185058,NM_003946,NM_001040715,NM_001185057	chr16,chr16,chr16,chr16	+,+,-,+	NOL3,NOL3,KIAA0895L,NOL3	-3713,-362,9696,-353
chr2:201979074-201980507	chr2	+	201979395	201980506	True	NM_173822,NM_001202517,NM_001202516,NM_001202519,NM_001127183,NM_001127184,NM_003879	chr2,chr2,chr2,chr2,chr2,chr2,chr2	-,+,+,+,+,+,+	FAM126B,CFLAR,CFLAR,CFLAR,CFLAR,CFLAR,CFLAR	-43003,370,370,370,2762,370,370
chr19:506804-507076	chr19	+	506957	507017	True	NM_033513,NM_182577	chr19,chr19	+,-	C19orf20,ODF3L2	479,-31974
chr12:21653446-21654180	chr12	+	21653471	21654148	True	NM_016072,NM_002907,NM_032941	chr12,chr12,chr12	+,-,-	GOLT1B,RECQL,RECQL	550,506,506
chr11:65625911-65626520	chr11	+	65625975	65626461	True	NM_025128,NM_005507	chr11,chr11	+,-	MUS81,CFL1	1410,-171
chr20:49251492-49252016	chr20	+	49251636	49251867	True	NR_030375,NM_080829	chr20,chr20	+,-	MIR645,FAM65C	-49376,1620
chr4:6475802-6476287	chr4	+	6475972	6476314	True	NM_020416,NM_015274	chr4,chr4	-,+	PPP2R2C,MAN2B2	-1646,100587
chr17:27371956-27372519	chr17	+	27371958	27372376	True	NM_016518,NM_004740	chr17,chr17	+,-	PIPOX,TIAF1	-2091,30301
chr19:18206974-18208054	chr19	+	18207152	18207970	True	NM_015016,NM_005535,NM_153701	chr19,chr19,chr19	+,-,-	MAST3,IL12RB1,IL12RB1	632,-9455,-9455
chr4:83959885-83961139	chr4	+	83960253	83961173	True	NM_016129,NM_001115007	chr4,chr4	+,-	COPS4,LIN54	-4065,-26213
chr4:114682949-114683271	chr4	+	114683044	114683228	True	NM_001221,NM_172115,NM_172129,NM_172127,NM_172114,NM_172128,NR_031641	chr4,chr4,chr4,chr4,chr4,chr4,chr4	-,-,-,-,-,-,+	CAMK2D,CAMK2D,CAMK2D,CAMK2D,CAMK2D,CAMK2D,MIR1243	39,39,39,39,39,39,-655076
chr6:28555228-28556920	chr6	+	28555235	28556848	True	NM_052923,NM_003996	chr6,chr6	-,+	SCAND3,GPX5	-123,-61497
chr6:28555228-28556920	chr6_cox_hap2	+	77439	79052	False	NM_052923,NM_003996	chr6_cox_hap2,chr6_cox_hap2	-,+	SCAND3,GPX5	-123,-61497
chr6:45390844-45391080	chr6	+	45390869	45391017	True	NM_004348,NM_181356	chr6,chr6	+,-	RUNX2,SUPT3H	-1006,-45199
chr11:64702809-64704196	chr11	+	64702947	64704185	True	NM_006244,NM_130769	chr11,chr11	+,-	PPP2R5B,GPHA2	-10855,-29
chr10:135173230-135173884	chr10	+	135173327	135173843	True	NM_145202,NM_001098483,NM_198472	chr10,chr10,chr10	+,-,-	PRAP1,C10orf125,C10orf125	-12534,-1798,-1798
chr1:245027110-245027367	chr1	+	245027186	245027402	True	NM_004501,NM_198076,NM_031844	chr1,chr1,chr1	-,+,-	HNRNPU,FAM36A,HNRNPU	475,-28598,475
chr4:57052199-57053369	chr4	+	57052405	57053323	True	NM_181806,NM_020722	chr4,chr4	-,+	AASDH,KIAA1211	200373,-16095
chr10:99331959-99332330	chr10	+	99332012	99332356	True	NM_178832,NM_001129981,NM_020349	chr10,chr10,chr10	-,+,+	MORN4,ANKRD2,ANKRD2	61038,5,5
chr17:2205757-2206413	chr17	+	2205904	2206454	True	NM_021947,NM_001170957,NM_017575	chr17,chr17,chr17	+,-,-	SRR,SMG6,SMG6	793,409,665
chrY:22915112-22916920	chrY	+	22915532	22916627	True	NM_001039567,NR_001542	chrY,chrY	+,-	RPS4Y2,TTTY10	1326,-234418
chr15:25441825-25442168	chr15	+	25441837	25442137	True	NR_003344,NR_003358,NR_003313,NR_003312,NR_003311,NR_003310,NM_130838,NR_003297,NR_003308,NR_003309,NR_003351,NR_003301,NR_003302,NR_003303,NR_003304,NR_003305,NR_003306,NR_003307	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,-,+,+,+,+,+,+,+,+,+,+,+	SNORD115-29,SNORD115-43,SNORD115-21,SNORD115-20,SNORD115-19,SNORD115-18,UBE3A,SNORD115-5,SNORD115-16,SNORD115-17,SNORD115-36,SNORD115-9,SNORD115-10,SNORD115-11,SNORD115-12,SNORD115-13,SNORD115-14,SNORD115-15	-7327,-7327,9271,9271,4332,4332,208566,-5322,2457,4332,-7327,-5325,-5325,-7327,-5325,-3420,-1820,9271
chr11:9285909-9286394	chr11	+	9285934	9286313	True	NM_006391,NM_015213	chr11,chr11	+,-	IPO7,DENND5A	119855,608
chr11:124493150-124494610	chr11	+	124493225	124494590	True	NM_032811,NR_016021,NM_170601	chr11,chr11,chr11	+,+,-	TBRG1,TBRG1,SIAE	-535,-535,49237
chr6:136235920-136236814	chr6	+	136236350	136236768	True	NM_001099286,NM_018945	chr6,chr6	-,+	FAM54A,PDE7B	334731,-63567
chr17:74550333-74550990	chr17	+	74550375	74550889	True	NM_134268,NR_004396,NR_004397,NR_004395	chr17,chr17,chr17,chr17	-,+,+,+	CYGB,SNORD1B,SNORD1C,SNORD1A	-16593,6300,3984,6825
chr10:103456132-103456955	chr10	+	103456195	103456763	True	NR_036114,NM_022039	chr10,chr10	+,-	MIR3158-1,FBXW4	-95074,-1452
chr16:19128795-19129709	chr16	+	19128870	19129336	True	NM_001034841,NM_015092,NR_028028	chr16,chr16,chr16	+,-,+	ITPRIPL2,SMG1,ITPRIPL2	-3667,-191144,-3667
chr1:24514298-24514551	chr1	+	24514410	24514490	True	NM_170743,NM_173064,NM_173065,NR_027087	chr1,chr1,chr1,chr1	-,-,-,+	IL28RA,IL28RA,IL28RA,LOC284632	-645,-645,-645,12239
chr21:37506743-37507243	chr21	+	37506764	37507228	True	NM_017438,NM_001236	chr21,chr21	-,+	SETD4,CBR3	-73948,34
chr14:67880111-67881519	chr14	+	67880117	67881404	True	NM_016445,NM_004094	chr14,chr14	-,+	PLEK2,EIF2S1	-1289,-53134
chrX:37431752-37432289	chrX	+	37431801	37432197	True	NM_001170331,NM_006520,NM_198511	chrX,chrX,chrX	+,-,+	LANCL3,DYNLT3,LANCL3	-1030,274744,-1030
chr5:125931118-125931580	chr5	+	125931128	125931484	True	NM_001201377,NM_032177,NM_001202404,NM_001182	chr5,chr5,chr5,chr5	-,+,-,-	ALDH7A1,PHAX,ALDH7A1,ALDH7A1	-46,5122,-46,-46
chr7:28996707-28997092	chr7	+	28996712	28997130	True	NM_014817,NM_004067	chr7,chr7	-,+	TRIL,CHN2	949,236990
chr17:27503952-27504627	chr17	+	27503956	27504470	True	NM_203318,NM_005208,NM_078471	chr17,chr17,chr17	-,+,-	MYO18A,CRYBA1,MYO18A	2987,69404,2987
chr16:78053535-78053951	chr16	+	78053599	78053881	True	NM_005752,NM_199355	chr16,chr16	+,-	CLEC3A,ADAMTS18	2561,-584588
chr13:36870523-36871559	chr13	+	36870601	36871601	True	NM_001144981,NM_001144983,NM_001144982,NM_001144985,NM_001144984,NM_001144986,NM_001198908,NM_001111046,NM_001198910	chr13,chr13,chr13,chr13,chr13,chr13,chr13,chr13,chr13	-,-,-,-,-,-,-,+,-	C13orf38,C13orf38,C13orf38,C13orf38,C13orf38,C13orf38,C13orf38,CCNA1,C13orf38-SOHLH2	441,441,441,441,441,441,441,134365,441
chr10:6780358-6780611	chr10	+	6780363	6780659	True	NR_036503,NM_006257	chr10,chr10	+,-	LOC439949,PRKCQ	-158027,-158125
chrX:64754079-64754572	chrX	+	64754113	64754551	True	NM_001170650,NM_031206,NM_001170649,NM_001010888	chrX,chrX,chrX,chrX	-,-,-,+	LAS1L,LAS1L,LAS1L,ZC3H12B	185,185,185,-45556
chr11:118887007-118888686	chr11	+	118887252	118888636	True	NR_037429,NM_001028,NM_016146	chr11,chr11,chr11	+,-,+	MIR3656,RPS25,TRAPPC4	1017,474,604
chr12:57523373-57524230	chr12	+	57523470	57524086	True	NM_002332,NR_033659	chr12,chr12	+,-	LRP1,STAT6	-1249,-18274
chr6:53612610-53613241	chr6	+	53612621	53613210	True	NM_018214,NM_001003760	chr6,chr6	+,-	LRRC1,KLHL31	46567,-82115
chr5:178986963-178987544	chr5	+	178987027	178987446	True	NM_005520,NM_025158,NM_001040451,NM_001040452	chr5,chr5,chr5,chr5	-,+,+,+	HNRNPH1,RUFY1,RUFY1,RUFY1	63327,-9507,-346,-346
chrY:21043084-21044064	chrY	+	21043313	21043823	True	NR_001544,NR_002159	chrY,chrY	-,+	NCRNA00185,TTTY9B	-3199,-151596
chr3:148575309-148575658	chr3	+	148575314	148575394	True	NM_001870,NM_003071	chr3,chr3	+,-	CPA3,HLTF	7648,228997
chrX:153061837-153062118	chrX	+	153061920	153062166	True	NM_001204526,NM_001204527,NM_174869,NR_037927,NM_004135,NM_006280	chrX,chrX,chrX,chrX,chrX,chrX	+,+,-,+,-,+	SSR4,SSR4,IDH3G,SSR4,IDH3G,SSR4	-2067,-2341,-1953,-2067,-1953,-1952
chr3:196463093-196463621	chr3	+	196463201	196463672	True	NM_032898,NM_002577	chr3,chr3	-,+	C3orf34,PAK2	-24078,3055
chr9:131486767-131487173	chr9	+	131486779	131487135	True	NM_013355,NM_032799	chr9,chr9	+,-	PKN3,ZDHHC12	-22028,-371
chr8:146210835-146212037	chr8	+	146211564	146211786	True	NR_002807,NR_023392	chr8,chr8	+,-	TMED10P1,ZNF252	8464,16549
chr11:44995831-44996166	chr11	+	44995853	44996109	True	NM_006034,NR_026681	chr11,chr11	-,+	TP53I11,LOC221122	-23245,-451
chr3:186559145-186559457	chr3	+	186559152	186559486	True	NM_004797,NM_181573,NM_001177800	chr3,chr3,chr3	+,-,+	ADIPOQ,RFC4,ADIPOQ	976,-34668,976
chr11:119598586-119599121	chr11	+	119598810	119599000	True	NM_203286,NM_203285,NR_034160,NM_002855	chr11,chr11,chr11,chr11	-,-,+,-	PVRL1,PVRL1,LOC100499227,PVRL1	485,485,-346380,485
chr7:2444239-2444532	chr7	+	2444317	2444523	True	NM_018641,NM_013321	chr7,chr7	+,-	CHST12,SNX8	-1109,-90218
chr15:25225927-25226195	chr15	+	25225926	25226176	True	NR_022008,NR_022011,NM_130838,NR_001292,NR_001293,NR_001294	chr15,chr15,chr15,chr15,chr15,chr15	+,+,-,+,+,+	PAR5,PAR-SN,UBE3A,SNORD108,SNORD107,SNORD64	3830,964,424537,5895,964,4070
chr14:34418879-34419634	chr14	+	34418886	34419652	True	NR_002937,NM_022073	chr14,chr14	+,-	C14orf19,EGLN3	989475,682
chr20:35237261-35237936	chr20	+	35237304	35237538	True	NM_199483,NM_001199534,NM_032214,NM_018840,NR_026562	chr20,chr20,chr20,chr20,chr20	+,+,-,+,+	C20orf24,C20orf24,SLA2,C20orf24,C20orf24	-3218,-3218,37070,-3218,-3218
chr8:134073346-134074081	chr8	+	134073623	134074069	True	NM_006748,NM_001204869	chr8,chr8	-,+	SLA,WISP1	-1020,129212
chr7:100663183-100663756	chr7	+	100663301	100663806	True	NM_003378,NM_001040105	chr7,chr7	-,+	VGF,MUC17	145097,12
chr2:11598513-11599932	chr2	+	11598654	11599486	True	NM_014668,NR_003094,NR_003095,NR_003092,NR_003093,NM_198256	chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-	GREB1,E2F6,E2F6,E2F6,E2F6,E2F6	74755,6861,6861,6861,6861,6861
chr10:116419252-116419596	chr10	+	116419306	116419605	True	NM_020940,NM_002313	chr10,chr10	+,-	FAM160B1,ABLIM1	161897,-1248
chr14:92135292-92137269	chr14	+	92135647	92136661	True	NM_024764,NM_017437	chr14,chr14	-,+	CATSPERB,CPSF2	61802,451636
chr11:33276716-33277698	chr11	+	33277050	33277430	True	NM_001033506,NM_001048200,NM_005734	chr11,chr11,chr11	-,+,+	CSTF3,HIPK3,HIPK3	-94013,1737,1737
chr12:53821480-53822896	chr12	+	53821593	53822860	True	NM_001193511,NM_020547,NM_001164691,NM_001164690	chr12,chr12,chr12,chr12	-,+,+,+	MAP3K12,AMHR2,AMHR2,AMHR2	70635,-4005,-4005,-4005
chrX:64771607-64771835	chrX	+	64771606	64771832	True	NM_001010888,NR_033742	chrX,chrX	+,-	ZC3H12B,FKSG43	-63042,519
chrX:14931525-14932659	chrX	+	14931593	14932674	True	NM_152633,NM_001177475	chrX,chrX	-,+	FANCB,MOSPD2	-40409,-28238
chrY:13310757-13311296	chrY	+	13311001	13311271	True	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	1463026,1222168
chr2:27721168-27722270	chr2	+	27721384	27722250	True	NM_022823,NM_015662,NM_001486	chr2,chr2,chr2	-,-,+	FNDC4,IFT172,GCKR	-3258,-8813,-1729
chr1:151372470-151372998	chr1	+	151372478	151373039	True	NM_003944,NM_002796	chr1,chr1	-,+	SELENBP1,PSMB4	-27314,-488
chr7:20720115-20721042	chr7	+	20720221	20721090	True	NM_178559,NM_182700	chr7,chr7	+,-	ABCB5,SP8	-33306,105473
chr11:5643876-5644203	chr11	+	5643906	5644000	True	NM_130390,NM_033034,NM_021616,NM_001003827	chr11,chr11,chr11,chr11	+,-,+,+	TRIM34,TRIM5,TRIM34,TRIM34	9484,62403,2206,-2798
chr2:27070110-27070345	chr2	+	27070186	27070362	True	NM_020134,NM_001029881	chr2,chr2	+,-	DPYSL5,CIB4	606,-205975
chr1:217809196-217810724	chr1	+	217809581	217810777	True	NM_138796,NM_018040	chr1,chr1	+,-	SPATA17,GPATCH2	-4945,-5172
chr3:46030983-46031779	chr3	+	46031007	46031741	True	NM_024513,NM_006564	chr3,chr3	-,+	FYCO1,CXCR6	5616,-46085
chr8:68644322-68645151	chr8	+	68644358	68645050	True	NM_020361,NM_025170	chr8,chr8	-,+	CPA6,PREX2	13620,219552
chr2:69003253-69004483	chr2	+	69003524	69004330	True	NM_014482,NM_001166276,NM_014882	chr2,chr2,chr2	-,+,+	BMP10,ARHGAP25,ARHGAP25	94369,-1642,-1642
chrX:100352609-100353181	chrX	+	100352615	100353055	True	NM_006733,NM_024917	chrX,chrX	+,-	CENPI,TRMT2B	1742,-45510
chr1:94588742-94590009	chr1	+	94588745	94589507	True	NM_000350,NR_030621	chr1,chr1	-,+	ABCA4,MIR760	-2040,-276408
chr8:17941627-17941877	chr8	+	17941645	17941845	True	NM_177924,NM_001127505,NM_004315,NM_001160179	chr8,chr8,chr8,chr8	-,-,-,+	ASAH1,ASAH1,ASAH1,NAT1	84,712,712,86125
chr21:42521202-42521797	chr21	+	42521290	42521716	True	NR_024100,NR_036167	chr21,chr21	-,+	C21orf130,MIR3197	-1299,17767
chr2:69748002-69749528	chr2	+	69748203	69749535	True	NR_003705,NM_001153	chr2,chr2	-,+	SNORA36C,ANXA4	-900,219591
chr3:107807789-107809114	chr3	+	107807878	107809142	True	NM_198793,NR_015394,NM_001777	chr3,chr3,chr3	-,+,-	CD47,LOC285205,CD47	851,-205885,851
chr17:49229827-49230754	chr17	+	49229961	49230678	True	NM_001018136,NM_198175,NM_000269,NR_037149,NM_003971	chr17,chr17,chr17,chr17,chr17	+,+,+,+,-	NME1-NME2,NME1,NME1,NME1-NME2,SPAG9	218,241,241,218,-31735
chr21:46788664-46789009	chr21	+	46788808	46789040	True	NM_130445,NR_028082	chr21,chr21	+,-	COL18A1,NCRNA00175	36056,55965
chr19:1956567-1956810	chr19	+	1956581	1956827	True	NR_033400,NM_001319	chr19,chr19	-,+	C19orf34,CSNK1G2	-2033,-15471
chr11:46370643-46372492	chr11	+	46370674	46372517	True	NM_001199266,NM_001199267,NM_000741,NM_001199268,NM_201533,NM_003646	chr11,chr11,chr11,chr11,chr11,chr11	+,+,-,+,+,+	DGKZ,DGKZ,CHRM4,DGKZ,DGKZ,DGKZ	-1769,-1769,35640,-1769,-3908,-1769
chr2:128091529-128092245	chr2	+	128091777	128091905	True	NM_000312,NM_006609	chr2,chr2	+,-	PROC,MAP3K2	84090,8927
chr6:43137955-43138392	chr6	+	43138101	43138437	True	NM_006443,NM_003131	chr6,chr6	-,+	C6orf108,SRF	58824,482
chr19:36247575-36247832	chr19	+	36247704	36247858	True	NM_019104,NM_001039887,NM_144617	chr19,chr19,chr19	+,+,-	LIN37,C19orf55,HSPB6	-8243,1185,122
chr8:41168334-41168836	chr8	+	41168355	41168835	True	NM_001174124,NM_003012	chr8,chr8	+,-	GOLGA7,SFRP1	179245,-1365
chr12:5540673-5541171	chr12	+	5540766	5540970	True	NM_020373,NM_001102654	chr12,chr12	-,+	ANO2,NTF3	514481,309
chr16:11040494-11041841	chr16	+	11040502	11041626	True	NM_014015,NM_015226	chr16,chr16	-,+	DEXI,CLEC16A	-4245,-2212
chr12:100654813-100656054	chr12	+	100655062	100656106	True	NM_017988,NM_152317	chr12,chr12	+,-	SCYL2,DEPDC4	5442,4807
chr8:104431405-104431958	chr8	+	104431409	104431959	True	NM_015420,NM_030780	chr8,chr8	+,-	DCAF13,SLC25A32	-4526,-3941
chr17:17590455-17591721	chr17	+	17590667	17591408	True	NM_030665,NR_024007	chr17,chr17	+,-	RAI1,SMCR5	-5931,91485
chr8:53475370-53475697	chr8	+	53475439	53475708	True	NM_207413,NM_005285	chr8,chr8	-,+	FAM150A,NPBWR1	2364,376759
chr9:126774053-126774264	chr9	+	126774161	126774313	True	NM_004789,NM_024820	chr9,chr9	+,-	LHX2,DENND1A	-323,-81744
chr7:121513288-121513643	chr7	+	121513407	121513596	True	NM_002851,NM_005763	chr7,chr7	+,-	PTPRZ1,AASS	-300,270798
chr13:41492758-41493775	chr13	+	41492973	41493491	True	NR_030352,NR_003365	chr13,chr13	+,-	MIR621,SUGT1P3	-108130,2445
chr16:80840085-80841380	chr16	+	80840161	80841405	True	NM_152342,NM_018455	chr16,chr16	-,+	CDYL2,CENPN	-1986,198697
chr8:124196026-124196860	chr8	+	124196222	124196884	True	NM_032899,NR_024479,NM_207006	chr8,chr8,chr8	+,-,+	FAM83A,LOC100131726,FAM83A	-1521,18149,-1521
chr9:131314378-131314677	chr9	+	131314446	131314708	True	NM_001195532,NM_001130438,NM_052844,NM_003127	chr9,chr9,chr9,chr9	+,+,-,+	SPTAN1,SPTAN1,WDR34,SPTAN1	128,128,104471,128
chr4:189660287-189660500	chr6	-	153311122	153312436	False	NM_194435,NM_012177,NM_001142522	chr6,chr6,chr6	+,-,-	VIP,FBXO5,FBXO5	-239247,-6919,-6382
chr4:189660287-189660500	chr4	+	189660286	189660555	True	NM_173553,NR_033869	chr4,chr4	-,+	TRIML2,LOC401164	-633878,-283609
chr12:95870142-95871160	chr12	+	95870434	95871193	True	NM_006838,NM_001042403	chr12,chr12	+,-	METAP2,USP44	-2674,71482
chr2:287146-287551	chr2	+	287145	287528	True	NR_024080,NM_001002919	chr2,chr2	+,-	ACP1,FAM150B	-22334,838
chr17:40346002-40346484	chr17	+	40346039	40346517	True	NR_024573,NM_033194,NM_032484,NM_001524,NM_001142622,NM_001142623	chr17,chr17,chr17,chr17,chr17,chr17	-,+,-,-,-,-	GHDC,HSPB9,GHDC,HCRT,GHDC,GHDC	-6,-71334,83,-8569,83,83
chr16:68298838-68299433	chr16	+	68299041	68299328	True	NM_003983,NM_001076785,NM_024939	chr16,chr16,chr16	+,+,-	SLC7A6,SLC7A6,ESRP2	-669,-669,-28905
chr1:26373405-26374178	chr1	+	26373616	26373966	True	NM_001004434,NM_032513,NM_004455	chr1,chr1,chr1	-,-,+	SLC30A2,SLC30A2,EXTL1	-1012,-1012,-25396
chr19:33360613-33361358	chr19	+	33360685	33361305	True	NM_014270,NM_001126335,NM_152266	chr19,chr19,chr19	-,-,+	SLC7A9,SLC7A9,C19orf40	-2,-2,101842
chr6:139088733-139089839	chr6	+	139088763	139089887	True	NM_015439,NM_020464	chr6,chr6	+,-	CCDC28A,NHSL1	4769,-195095
chr17:46048587-46048843	chr17	+	46048641	46048781	True	NM_024320,NM_176096	chr17,chr17	-,+	PRR15L,CDK5RAP3	-13531,-263
chr2:201752881-201753339	chr2	+	201752920	201753108	True	NM_001142356,NM_032472,NM_001142355,NM_001136039,NM_130906,NM_021824	chr2,chr2,chr2,chr2,chr2,chr2	+,-,+,+,-,+	NIF3L1,PPIL3,NIF3L1,NIF3L1,PPIL3,NIF3L1	3532,791,941,941,791,999
chrX:151869138-151869694	chrX	+	151869164	151869664	True	NM_001129826,NM_005363,NM_001129828,NM_175868,NM_004909,NM_001080848	chrX,chrX,chrX,chrX,chrX,chrX	-,+,-,+,-,-	CSAG3,MAGEA6,CSAG3,MAGEA6,CSAG2,CSAG2	8056,-1970,8133,-1970,8133,8133
chrX:151869138-151869694	chrX	-	151935900	151936312	False	NM_001129826,NM_001129828,NM_005362,NM_004909,NM_001080848	chrX,chrX,chrX,chrX,chrX	+,+,-,+,+	CSAG3,CSAG3,MAGEA3,CSAG2,CSAG2	-8140,-8217,1978,-8217,-8217
chr22:27007735-27009349	chr22	+	27007889	27009230	True	NM_001886,NM_001887	chr22,chr22	+,-	CRYBA4,CRYBB1	8697,4811
chr5:102478334-102479173	chr5	+	102478523	102479222	True	NM_017676,NM_015216	chr5,chr5	-,+	GIN1,PPIP5K2	-22681,-13331
chr2:135809207-135809800	chr2	+	135809323	135809769	True	NM_025052,NM_012233,NM_001172435	chr2,chr2,chr2	-,+,+	YSK4,RAB3GAP1,RAB3GAP1	-27075,65,65
chr9:140656439-140657190	chr9	+	140656528	140657228	True	NM_032937,NR_024341	chr9,chr9	-,+	C9orf37,FLJ40292	-143220,245
chr19:47294061-47294964	chr19	+	47294897	47294973	True	NM_001145144,NM_001145145,NM_005628,NM_024301	chr19,chr19,chr19,chr19	-,-,-,+	SLC1A5,SLC1A5,SLC1A5,FKRP	-4352,-6763,-3055,-45651
chr1:1446602-1446904	chr1	+	1446688	1446876	True	NM_001170536,NM_001170535,NM_018188,NM_001114748	chr1,chr1,chr1,chr1	+,+,+,-	ATAD3A,ATAD3A,ATAD3A,C1orf70	1033,646,646,28914
chrY:21851980-21853377	chrY	+	21852108	21853237	True	NM_032576,NM_001146705	chrY,chrY	+,-	CYorf15B,KDM5D	-93717,53645
chr3:122573862-122575403	chr3	+	122573991	122575414	True	NM_024610,NR_024618	chr3,chr3	-,+	HSPBAP1,LOC100129550	-61341,29945
chr18:61306379-61307490	chr18	+	61306482	61307478	True	NM_012397,NM_002974	chr18,chr18	+,-	SERPINB13,SERPINB4	-51999,4074
chr5:140182625-140182846	chr5	+	140182654	140182894	True	NM_002109,NM_031495,NM_031500,NM_031497,NM_018907,NM_018906,NM_018905	chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,+,+,+,+,+,+	HARS,PCDHA2,PCDHA4,PCDHA3,PCDHA4,PCDHA3,PCDHA2	-111683,-8261,3777,-1922,3777,-1922,-8261
chr11:73591654-73592626	chr11	+	73591671	73592224	True	NM_025155,NM_016565	chr11,chr11	+,-	PAAF1,CHCHD8	-3689,-3781
chr1:6670672-6671692	chr1	+	6670784	6671498	True	NM_014851,NM_153812	chr1,chr1	-,+	KLHL21,PHF13	-7855,2257
chr4:154386922-154387212	chr4	+	154386956	154387156	True	NR_001562,NM_015196,NM_001131007	chr4,chr4,chr4	-,+,+	ANXA2P1,KIAA0922,KIAA0922	-156993,341,341
chr16:3115221-3116071	chr16	+	3115228	3115911	True	NM_032805,NM_004221,NM_001012718,NM_001012636,NM_001012635,NM_001012634,NM_001012633,NM_001012632,NM_001012631	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	-,+,+,+,+,+,+,+,+	ZSCAN10,IL32,IL32,IL32,IL32,IL32,IL32,IL32,IL32	27000,10,10,-21,-51,-24,10,0,10
chr5:153578491-153579601	chr5	+	153578535	153579325	True	NM_018691,NM_198321	chr5,chr5	-,+	FAM114A2,GALNT10	-160038,-8291
chr1:93644841-93645369	chr1	+	93645100	93645328	True	NM_016040,NM_206886,NM_001167830,NR_030761	chr1,chr1,chr1,chr1	-,+,-,-	TMED5,CCDC18,TMED5,TMED5	968,952,968,968
chr9:101978429-101980367	chr9	+	101978523	101980355	True	NM_006808,NR_024532,NM_033087	chr9,chr9,chr9	+,-,-	SEC61B,ALG2,ALG2	4214,3941,3941
chr1:178325825-178326418	chr1	+	178325827	178326407	True	NM_004841,NR_027982	chr1,chr1	+,-	RASAL2,LOC100302401	-15279,-262699
chr17:61934044-61934266	chr17	+	61934092	61934202	True	NM_001098426,NR_002947	chr17,chr17	-,+	SMARCD2,TCAM1P	-13741,173
chr17:79335032-79335479	chr17	+	79335231	79335351	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	38188,-30757
chr17:16337900-16338142	chr17	+	16337904	16338126	True	NR_027178,NR_027166,NR_027167,NR_027164,NR_027165,NR_027162,NR_027163,NR_027160,NR_027161,NR_027168,NR_027169,NR_002744,NR_027667,NR_027158,NR_003043,NR_003054,NR_027175,NR_027174,NR_027177,NR_027176,NR_027171,NR_027170,NR_027173,NR_027172,NR_027179,NR_027159,NM_001113567	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,-	NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,SNORD49A,NCRNA00188,NCRNA00188,SNORD49B,SNORD65,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,C17orf76	4174,4174,4174,4174,4174,4174,4174,4174,4174,4174,4174,5223,4174,4174,4696,6413,4174,4174,4174,4174,4174,4174,4174,4174,4174,4174,57404
chr17:27348505-27348798	chr17	+	27348545	27348817	True	NM_178860,NM_016518	chr17,chr17	-,+	SEZ6,PIPOX	-15464,21100
chr3:52696563-52697997	chr3	+	52697025	52697689	True	NM_014366,NM_018165	chr3,chr3	+,-	GNL3,PBRM1	22246,16114
chr7:25018642-25018998	chr7	+	25018673	25018988	True	NM_145321,NM_145322,NM_145320,NM_015550,NM_016447	chr7,chr7,chr7,chr7,chr7	-,-,-,-,+	OSBPL3,OSBPL3,OSBPL3,OSBPL3,MPP6	823,823,823,823,-405646
chr5:169393763-169394478	chr5	+	169393818	169394391	True	NM_012188,NM_001129891	chr5,chr5	+,-	FOXI1,FAM196B	138525,13404
chr22:51015039-51015432	chr22	+	51015108	51015414	True	NM_001145137,NM_001145136,NM_001145135,NM_001145134,NR_021492,NM_005198,NM_152245,NR_027928,NM_004377,NM_152246	chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,+,-,-,-,-,-	CPT1B,CPT1B,CPT1B,CPT1B,LOC100144603,CHKB,CPT1B,CHKB-CPT1B,CPT1B,CPT1B	1142,1732,1732,1732,6040,6064,1732,6064,1530,1530
chr17:4610392-4611343	chr17	+	4610834	4611136	True	NM_004313,NM_199004,NM_014389	chr17,chr17,chr17	+,+,-	ARRB2,ARRB2,PELP1	2652,2652,-3202
chr1:37500122-37500336	chr1	+	37500236	37500296	True	NR_036217,NM_000831	chr1,chr1	+,-	MIR4255,GRIK3	126867,-392
chr1:226072224-226072515	chr1	+	226072335	226072489	True	NM_020997,NM_000120,NM_014698	chr1,chr1,chr1	-,+,-	LEFTY1,EPHX1,TMEM63A	4407,-59391,-1915
chr5:68390322-68391118	chr5	+	68390403	68390917	True	NM_176816,NM_022902,NM_024055	chr5,chr5,chr5	-,+,+	CCDC125,SLC30A5,SLC30A5	225543,-572,-636
chr6:43025213-43026796	chr6	+	43025701	43026806	True	NM_015950,NM_001168370,NM_014780,NM_201521,NM_201523,NM_201522,NM_138343	chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,+,+,+,+	MRPL2,CUL7,CUL7,KLC4,KLC4,KLC4,KLC4	487,-4018,-4018,565,822,1375,565
chr19:10811803-10812043	chr19	+	10811805	10811991	True	NM_031209,NR_024333	chr19,chr19	+,-	QTRT1,LOC147727	120,-47257
chr5:34005491-34005897	chr5	+	34005536	34005916	True	NM_001167598,NM_001167595,NM_001167597,NM_001167596,NM_014324,NM_016568,NM_203382	chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,-,+,-	AMACR,AMACR,AMACR,AMACR,AMACR,RXFP3,AMACR	2354,2354,2354,2354,2354,-69096,2354
chr12:40104779-40105874	chr12	+	40104826	40104943	True	NM_001031748,NM_005164	chr12,chr12	+,-	C12orf40,ABCD2	-84905,-90983
chr11:34379633-34379849	chr11	+	34379838	34379898	True	NM_001752,NM_145804	chr11,chr11	+,-	CAT,ABTB2	80573,-283
chr16:25704398-25705233	chr16	+	25704404	25705208	True	NM_001012981,NM_006040	chr16,chr16	-,+	ZKSCAN2,HS3ST4	-435549,-1108
chr4:39696764-39697262	chr4	+	39696783	39697311	True	NM_005339,NM_174921,NM_001111112,NM_001111113	chr4,chr4,chr4,chr4	+,-,+,+	UBE2K,C4orf34,UBE2K,UBE2K	2352,-56302,2352,2352
chr1:19215539-19215924	chr1	+	19215675	19215895	True	NM_001161504,NM_001135254	chr1,chr1	-,+	ALDH4A1,PAX7	1540,-258226
chr14:105557191-105557744	chr14	+	105557209	105557593	True	NM_174891,NM_013345	chr14,chr14	+,-	C14orf79,GPR132	-104644,-25455
chr17:35653797-35654083	chr17	+	35653926	35654055	True	NM_198837,NM_198838,NM_173625	chr17,chr17,chr17	-,-,+	ACACA,ACACA,C17orf78	2696,2696,78929
chr7:6486360-6486924	chr7	+	6486763	6486939	True	NM_001142936,NM_018890,NM_139179	chr7,chr7,chr7	-,+,-	DAGLB,RAC1,DAGLB	754,-72691,754
chr7:41739233-41739740	chr7	+	41739318	41739788	True	NM_002192,NR_027119,NR_027118	chr7,chr7,chr7	-,+,+	INHBA,LOC285954,LOC285954	2968,-5823,-5855
chr12:70092838-70093075	chr12	+	70092931	70093111	True	NM_032735,NM_022456,NM_152439	chr12,chr12,chr12	-,+,-	BEST3,RAB3IP,BEST3	135,39519,-9875
chr3:13592043-13592342	chr3	+	13592050	13592144	True	NM_001004019,NM_001998,NM_024923	chr3,chr3,chr3	+,+,-	FBLN2,FBLN2,NUP210	-1476,-1476,-130241
chr17:42400449-42400794	chr17	+	42400562	42400682	True	NM_001143780,NM_001144825,NM_016016	chr17,chr17,chr17	-,+,-	SLC25A39,RUNDC3A,SLC25A39	1585,-14686,1585
chr2:102768819-102769766	chr2	+	102769089	102769728	True	NM_000877,NM_032718	chr2,chr2	+,-	IL1R1,MFSD9	673,583659
chr16:229498-229977	chr16	+	229696	229982	True	NM_001077350,NM_000558,NM_000517,NM_005331	chr16,chr16,chr16,chr16	-,+,+,+	NPRL3,HBA1,HBA2,HBQ1	-41024,-3070,-6903,350
chr12:79187965-79189100	chr12	+	79188093	79188782	True	NM_001135805,NM_002583	chr12,chr12	+,-	SYT1,PAWR	68990,896058
chr1:19811079-19811427	chr1	+	19811312	19811390	True	NM_001032363,NM_004930	chr1,chr1	+,-	C1orf151,CAPZB	112080,726
chr12:45445383-45445637	chr12	+	45445454	45445581	True	NM_001004329,NM_001025356	chr12,chr12	-,+	DBX2,ANO6	-572,164188
chr19:21262611-21263236	chr19	+	21262768	21263083	True	NM_182515,NM_021269	chr19,chr19	+,-	ZNF714,ZNF708	1869,249184
chr3:24540928-24541219	chr3	+	24540932	24541250	True	NM_001145425,NM_001128176,NM_000461,NM_001128177	chr3,chr3,chr3,chr3	+,-,-,-	NR1D2,THRB,THRB,THRB	-553379,-4666,-4619,-4619
chr7:152124749-152125570	chr7	+	152124774	152125366	True	NR_002935,NM_170606	chr7,chr7	+,-	FABP5P3,MLL3	8613,7778
chr19:36021020-36021311	chr19	+	36021029	36021233	True	NM_001166035,NM_001166034,NM_014364,NM_198538	chr19,chr19,chr19,chr19	-,-,+,-	SBSN,SBSN,GAPDHS,SBSN	-1776,-1776,3080,-1776
chr2:237991885-237993837	chr2	+	237992069	237993836	True	NM_004369,NM_006710,NM_198189	chr2,chr2,chr2	-,+,+	COL6A3,COPS8,COPS8	329077,247,247
chr16:68300341-68301207	chr16	+	68300484	68300652	True	NM_003983,NM_001076785,NM_024939	chr16,chr16,chr16	+,+,-	SLC7A6,SLC7A6,ESRP2	-2112,-2112,-30348
chr1:15848932-15850524	chr1	+	15849212	15850439	True	NM_015291,NM_032996,NM_001229	chr1,chr1,chr1	+,-,-	DNAJC16,CASP9,CASP9	2912,896,551
chr7:75369603-75370683	chr7	+	75369626	75370606	True	NM_001040456,NM_005338	chr7,chr7	+,-	RHBDD2,HIP1	137710,-1347
chr3:132378694-132379032	chr3	+	132378741	132379009	True	NM_032169,NM_198329,NM_024818	chr3,chr3,chr3	-,+,+	ACAD11,UBA5,UBA5	16,-5502,130
chr19:376007-377847	chr19	+	376064	377710	True	NM_016585,NM_130760,NM_199202	chr19,chr19,chr19	-,+,-	THEG,MADCAM1,THEG	-55,118779,-55
chr22:24061550-24061930	chr22	+	24061550	24061818	True	NR_024448,NM_153615	chr22,chr22	-,+	LOC91316,RGL4	-1940,-28553
chr22:29457656-29458379	chr22	+	29457662	29458423	True	NM_001039570,NM_015370	chr22,chr22	+,-	KREMEN1,C22orf31	10642,-32
chr9:115982913-115983206	chr9	+	115982944	115983244	True	NM_015258,NM_001859	chr9,chr9	-,+	FKBP15,SLC31A1	447,563
chr6:24496617-24497221	chr6	+	24496635	24497229	True	NM_170740,NM_001503,NM_001080,NM_177483	chr6,chr6,chr6,chr6	+,-,+,-	ALDH5A1,GPLD1,ALDH5A1,GPLD1	-1489,-6785,-1489,-6836
chr3:152015536-152016643	chr3	+	152015946	152016575	True	NR_027038,NM_207293,NM_207295,NM_207294,NM_207297,NM_207296	chr3,chr3,chr3,chr3,chr3,chr3	-,+,+,+,+,+	LOC401093,MBNL1,MBNL1,MBNL1,MBNL1,MBNL1	-28531,618,618,618,618,618
chr9:90534814-90535262	chr9	+	90535032	90535284	True	NM_001145124,NM_001039803	chr9,chr9	+,-	FAM75C1,CDK20	-2206,54461
chr9:90534814-90535262	chr9	-	90747537	90747613	False	NM_001145124,NM_001166137	chr9,chr9	+,-	FAM75C1,FAM75C2	-214711,2337
chr14:60715815-60716018	chr14	+	60715819	60716067	True	NM_177951,NM_177952,NM_016029,NM_021003	chr14,chr14,chr14,chr14	+,+,-,+	PPM1A,PPM1A,DHRS7,PPM1A	-78,-3400,-83608,-78
chr21:43442435-43442861	chr21	+	43442531	43442909	True	NR_027273,NM_020727	chr21,chr21	+,-	C21orf121,ZNF295	-474,-12035
chr19:58514481-58514876	chr19	+	58514503	58514753	True	NR_036508,NM_025027	chr19,chr19	+,-	LOC100128398,ZNF606	-292,11
chr1:153367590-153369030	chr1	+	153367611	153368889	True	NM_176823,NM_002964	chr1,chr1	+,-	S100A7A,S100A8	20110,-3947
chr21:19172118-19173880	chr21	+	19172192	19173061	True	NM_001100420,NM_001204175	chr21,chr21	-,+	C21orf91,CHODL	18699,116595
chrX:30265472-30265983	chrX	+	30265543	30265807	True	NM_177415,NM_177404,NM_002363,NM_000475,NM_002367	chrX,chrX,chrX,chrX,chrX	+,+,+,-,+	MAGEB1,MAGEB1,MAGEB1,NR0B1,MAGEB4	-3746,-323,-3746,61738,-5537
chr9:97023713-97024692	chr9	+	97023760	97024710	True	NM_194320,NM_017561	chr9,chr9	+,-	ZNF169,FAM22F	-2246,66266
chr15:100273813-100274295	chr15	+	100273865	100274260	True	NM_001130928,NM_152449	chr15,chr15	+,-	MEF2A,LYSMD4	-100733,-239
chr3:127309517-127309920	chr3	+	127309516	127309832	True	NM_004526,NM_001136053,NM_001142646	chr3,chr3,chr3	+,-,-	MCM2,TPRA1,TPRA1	7420,-20,-34
chr3:193934375-193936233	chr3	+	193934867	193936096	True	NR_024480,NM_005524	chr3,chr3	-,+	LOC100131551,HES1	94547,-80995
chr4:84030629-84030959	chr4	+	84030628	84030758	True	NM_016619,NM_001130716,NM_001130715,NM_016129	chr4,chr4,chr4,chr4	-,-,-,+	PLAC8,PLAC8,PLAC8,COPS4	5203,304,5203,-74440
chr11:130298948-130299296	chr11	+	130299013	130299332	True	NM_007037,NM_139055	chr11,chr11	-,+	ADAMTS8,ADAMTS15	-474,19536
chr19:17502212-17502649	chr19	+	17502212	17502664	True	NM_004335,NM_138401,NM_031310	chr19,chr19,chr19	-,+,-	BST2,FAM125A,PLVAP	13770,28247,-14075
chr1:150293261-150293461	chr1	+	150293264	150293450	True	NM_004698,NM_016022	chr1,chr1	+,-	PRPF3,APH1A	477,-51732
chr17:37607458-37607683	chr17	+	37607505	37607623	True	NM_004774,NM_015083	chr17,chr17	-,+	MED1,CDK12	22,10115
chr17:42463576-42464610	chr17	+	42463606	42464491	True	NM_000419,NM_002087	chr17,chr17	-,+	ITGA2B,GRN	2433,-41166
chr15:45112627-45113617	chr15	+	45112968	45113540	True	NM_182985,NM_001145112	chr15,chr15	+,-	TRIM69,PATL2	-84459,-143882
chr16:30620692-30620893	chr16	+	30620757	30620933	True	NM_138447,NM_024031	chr16,chr16	-,+	ZNF689,PRR14	799,41307
chr13:27143049-27144142	chr13	+	27143048	27143852	True	NM_005288,NM_006646	chr13,chr13	-,+	GPR12,WASF3	191126,-11259
chr20:44421038-44421341	chr20	+	44421038	44421360	True	NM_080614,NM_052951	chr20,chr20	-,+	WFDC3,DNTTIP1	-491,-513
chr12:95047012-95048104	chr12	+	95047197	95047324	True	NM_020698,NR_030171	chr12,chr12	-,+	TMCC3,MIR492	-2873,180849
chr17:38139444-38140173	chr17	+	38139726	38140102	True	NM_139280,NM_002809	chr17,chr17	-,+	ORMDL3,PSMD3	-55842,-2729
chr8:6692269-6692519	chr8	+	6692268	6692461	True	NM_207411,NM_018361	chr8,chr8	-,+	XKR5,AGPAT5	755,-126441
chr15:41953351-41953708	chr15	+	41953477	41953687	True	NM_001080541,NM_015540,NM_001164273	chr15,chr15,chr15	+,-,+	MGA,RPAP1,MGA	-918,-117013,-918
chr19:35493832-35494472	chr19	+	35493914	35494394	True	NM_175872,NM_001136199,NM_020895	chr19,chr19,chr19	-,+,+	ZNF792,GRAMD1A,GRAMD1A	-38961,-2719,-2719
chr3:118951746-118952305	chr3	+	118951950	118952336	True	NM_212543,NM_003778,NM_006952	chr3,chr3,chr3	-,-,+	B4GALT4,B4GALT4,UPK1B	7468,7468,-59576
chrX:80064643-80064938	chrX	+	80064740	80064976	True	NM_152630,NM_153252	chrX,chrX	+,-	FAM46D,BRWD3	-388845,307
chr12:66562538-66563374	chr12	+	66562541	66563300	True	NM_016056,NM_001142523	chr12,chr12	-,+	TMBIM4,IRAK3	557,19677
chrX:150907603-150909426	chrX	+	150907877	150909353	True	NR_029973,NM_005140	chrX,chrX	-,+	MIR452,CNGA2	218881,-4710
chr6:34216281-34216630	chr6	+	34216382	34216608	True	NM_001008704,NM_145905,NM_178508,NM_001008703	chr6,chr6,chr6,chr6	-,+,-,-	C6orf1,HMGA1,C6orf1,C6orf1	346,-9865,346,346
chr10:118351106-118351989	chr10	+	118351230	118352024	True	NM_006229,NM_144661	chr10,chr10	+,-	PNLIPRP1,C10orf82	-791,77507
chr18:52508299-52510116	chr18	+	52508752	52509980	True	NM_004163,NM_001143829	chr18,chr18	+,-	RAB27B,CCDC68	-12977,115349
chr15:78552610-78554115	chr15	+	78552618	78553712	True	NM_001130182,NM_001130183,NM_015162,NM_018602	chr15,chr15,chr15,chr15	+,+,-,+	DNAJA4,DNAJA4,ACSBG1,DNAJA4	3276,4847,-25569,2774
chr3:190594350-190595264	chr19	+	47870553	47870603	True	NM_001009813,NM_014681	chr19,chr19	-,+	MEIS3,DHX34	52232,-18066
chr12:97301698-97302808	chr12	+	97301827	97302465	True	NM_002595,NM_152905,NM_001135175,NM_001135176,NM_001135177	chr12,chr12,chr12,chr12,chr12	-,+,+,+,+	CDK17,NEDD1,NEDD1,NEDD1,NEDD1	-507461,-877,-634,-877,-877
chr7:150930108-150930534	chr7	+	150930140	150930452	True	NM_007189,NM_005692,NR_030407,NM_019015	chr7,chr7,chr7,chr7	-,-,+,+	ABCF2,ABCF2,MIR671,CHPF2	-5823,-5823,5054,-606
chr19:12993014-12993537	chr19	+	12993235	12993299	True	NM_006563,NM_001375,NM_000159,NM_013976	chr19,chr19,chr19,chr19	-,-,+,+	KLF1,DNASE2,GCDH,GCDH	4768,-900,8674,8674
chr1:150293663-150293900	chr1	+	150293760	150293878	True	NM_004698,NM_016022	chr1,chr1	+,-	PRPF3,APH1A	49,-52228
chr2:160643138-160644164	chr2	+	160643162	160644215	True	NM_022826,NM_001198763	chr2,chr2	+,-	MARCH7,CD302	-74210,10608
chr19:7695785-7696299	chr19	+	7696098	7696168	True	NM_006949,NR_033242,NM_020196,NM_174895,NM_001127396,NM_001171155	chr19,chr19,chr19,chr19,chr19,chr19	+,+,-,-,+,+	STXBP2,LOC100131801,XAB2,PCP2,STXBP2,LOC100131801	5822,-1478,-1659,2452,5822,-1478
chr15:35260756-35261580	chr15	+	35260853	35261627	True	NR_003144,NM_014691	chr15,chr15	+,-	LOC723972,AQR	267899,418
chr22:18110509-18110840	chr22	+	18110613	18110724	True	NM_015367,NM_001039366,NM_001039367,NM_001696	chr22,chr22,chr22,chr22	+,-,-,-	BCL2L13,ATP6V1E1,ATP6V1E1,ATP6V1E1	10760,919,919,919
chr15:60923381-60923733	chr15	+	60923391	60923764	True	NM_012182,NM_002943,NM_134260	chr15,chr15,chr15	+,-,-	FOXB1,RORA,RORA	-627021,-3662,-3662
chr18:66534520-66534891	chr18	+	66534533	66534879	True	NM_024781,NM_019022	chr18,chr18	+,-	CCDC102B,TMX3	-69267,-152180
chr21:35748158-35748439	chr21	+	35748353	35748487	True	NM_001127670,NM_058182	chr21,chr21	-,+	KCNE1,FAM165B	79626,-655
chr21:27907405-27909020	chr21	+	27907669	27909046	True	NM_002040,NM_052954	chr21,chr21	+,-	GABPA,CYYR1	-800391,36585
chr11:12405185-12406362	chr11	+	12405543	12406329	True	NM_018222,NM_013253	chr11,chr11	+,-	PARVA,DKK3	-6568,-374626
chr7:140773310-140773546	chr7	+	140773363	140773465	True	NM_053035,NM_001195278	chr7,chr7	-,+	MRPS33,LOC100131199	-58582,566
chrX:17394778-17395080	chrX	+	17394915	17395085	True	NR_033348,NM_198270	chrX,chrX	-,+	RAI2,NHS	483912,-1423
chrX:16963719-16963919	chrX	+	16963841	16963911	True	NM_004726,NM_002893,NM_001080975	chrX,chrX,chrX	+,-,+	REPS2,RBBP7,REPS2	902,-75307,902
chr16:2566870-2568755	chr16	+	2567088	2568660	True	NM_001048212,NM_001198569,NM_015944,NM_001145815,NM_001694	chr16,chr16,chr16,chr16,chr16	-,+,+,+,+	CEMP1,ATP6V0C,AMDHD2,AMDHD2,ATP6V0C	12799,-3412,1702,1702,-3268
chr1:97185882-97186895	chr1	+	97186256	97186930	True	NM_000110,NM_021190	chr1,chr1	-,+	DPYD,PTBP2	1199735,244
chr16:22311310-22311925	chr16	+	22311340	22311846	True	NM_018119,NM_001802	chr16,chr16	+,-	POLR3E,CDR2	-2650,74142
chr14:73958595-73958873	chr14	+	73958607	73958897	True	NM_003744,NM_024644	chr14,chr14	-,+	NUMB,C14orf169	-33321,-1014
chr16:16315544-16316523	chr16	+	16315680	16316563	True	NM_001171,NM_001079528,NM_001004067	chr16,chr16,chr16	-,-,+	ABCC6,ABCC6,NOMO3	815,815,9825
chr16:16315544-16316523	chr16	-	18583325	18584206	False	NR_003569,NM_173614,NM_001004060	chr16,chr16,chr16	+,-,-	ABCC6P1,NOMO2,NOMO2	-806,-9891,-9891
chr16:16315544-16316523	chr16	+	14916917	14917798	False	NR_023387,NM_014287	chr16,chr16	-,+	ABCC6P2,NOMO1	811,9844
chr8:124775157-124776243	chr8	+	124775559	124776262	True	NM_004306,NM_144963	chr8,chr8	-,+	ANXA13,FAM91A1	-25912,4619
chr9:45728031-45728347	chr9	+	45728290	45728360	True	NM_001145196,NR_024060	chr9,chr9	-,+	FAM75A6,FAM27A	-2097560,-1313
chr9:45728031-45728347	chr9	-	67792861	67792921	False	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	1319,133839
chr9:45728031-45728347	chr9	+	44991499	44991559	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-1315,-1360769
chr6:14964881-14965956	chr6	+	14965018	14965950	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	280576,697389
chr1:86601674-86602836	chr1	+	86601723	86602876	True	NM_152890,NM_006536	chr1,chr1	-,+	COL24A1,CLCA2	19300,286892
chr19:12614653-12615993	chr19	+	12614864	12615736	True	NM_152601,NM_153358	chr19,chr19	-,+	ZNF709,ZNF791	-19232,105995
chr10:134349137-134350013	chr10	+	134349273	134349951	True	NM_005539,NM_173575	chr10,chr10	+,-	INPP5A,STK32C	1401,-227796
chr8:99960164-99960501	chr8	+	99960167	99960549	True	NM_053001,NM_006281,NM_001142462	chr8,chr8,chr8	+,-,+	OSR2,STK3,OSR2	-3587,-122258,-3587
chr8:145653469-145653780	chr8	+	145653490	145653782	True	NM_145754,NM_183057,NM_016208	chr8,chr8,chr8	+,-,-	KIFC2,VPS28,VPS28	37955,195,195
chr17:59534787-59535014	chr17	+	59534789	59535017	True	NM_199290,NM_018488	chr17,chr17	-,+	NACA2,TBX4	133596,-1033
chr1:155560491-155561503	chr1	+	155560919	155561174	True	NM_018116,NM_018489	chr1,chr1	+,-	MSTO1,ASH1L	18832,-28595
chr1:159794404-159794850	chr1	+	159794413	159794757	True	NM_001134233,NM_020125	chr1,chr1	-,+	C1orf204,SLAMF8	30430,1721
chr6:78173730-78173985	chr6	+	78173891	78174033	True	NM_000863,NM_001010844	chr6,chr6	-,+	HTR1B,IRAK1BP1	-771,1403155
chr11:74953406-74953619	chr11	+	74953430	74953602	True	NM_001195528,NR_029891	chr11,chr11	+,-	LOC441617,MIR326	-1531,92678
chr1:47265085-47265444	chr1	+	47265193	47265419	True	NM_000779,NM_001099772,NM_014774	chr1,chr1,chr1	+,+,-	CYP4B1,CYP4B1,KIAA0494	-575,-575,-80457
chr7:127229361-127230148	chr7	+	127229442	127230173	True	NM_024523,NM_020369,NM_001662	chr7,chr7,chr7	-,+,+	GCC1,FSCN3,ARF5	-3788,3515,-1092
chr16:20414228-20414770	chr16	+	20414323	20414581	True	NM_174924,NM_017888	chr16,chr16	-,+	PDILT,ACSM5	1502,6274
chr2:234663879-234664162	chr2	+	234663883	234664089	True	NR_037695,NR_037694,NR_037696,NM_000463	chr2,chr2,chr2,chr2	-,-,-,+	LOC100286922,LOC100286922,LOC100286922,UGT1A1	-48,-48,-48,4829
chr22:30881596-30882496	chr22	+	30881616	30882202	True	NR_001580,NM_016498	chr22,chr22	-,+	SDC4P,MTFP1	-3873,-60056
chr16:2510638-2510909	chr16	+	2510783	2510925	True	NM_001048212,NM_025108	chr16,chr16	-,+	CEMP1,C16orf59	70534,-719
chr2:176962671-176963253	chr2	+	176962683	176963247	True	NM_001080458,NM_000523,NM_021192,NM_021193	chr2,chr2,chr2,chr2	-,+,+,+	EVX2,HOXD13,HOXD11,HOXD12	-13993,-5202,8836,1282
chr2:233866872-233867691	chr2	+	233866871	233867700	True	NM_005383,NM_019850	chr2,chr2	+,-	NEU2,NGEF	29681,10301
chr21:40550484-40550869	chr21	+	40550484	40550809	True	NM_004627,NM_203433,NM_003720	chr21,chr21,chr21	+,-,-	WRB,PSMG1,PSMG1	201403,4688,4688
chr8:73449667-73449937	chr8	+	73449807	73449925	True	NM_004770,NR_033867	chr8,chr8	+,-	KCNB2,LOC392232	-237,-285938
chr8:81750405-81751245	chr8	+	81750409	81751291	True	NM_001033723,NM_023929	chr8,chr8	-,+	ZNF704,ZBTB10	35775,-352012
chr10:48861910-48862321	chr10	+	48861963	48862330	True	NR_033172,NM_153034	chr10,chr10	-,+	FRMPD2P1,ZNF488	408,-506925
chr10:48861910-48862321	chr10	+	46675150	46675430	False	NR_027632,NM_015605	chr10,chr10	+,-	FAM35B,PTPN20B	222210,-34147
chr10:48861910-48862321	chr10	+	49382602	49382882	False	NR_033178,NR_033172,NM_002750	chr10,chr10,chr10	-,-,+	FRMPD2,FRMPD2P1,MAPK8	408,408,226804
chr3:9958570-9958772	chr3	+	9958574	9958820	True	NR_037807,NM_032732,NM_207351,NM_153460,NM_153461,NM_001203263,NM_001203264,NM_001203265	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,-,+,+,+,+,+	IL17RC,IL17RC,PRRT3,IL17RC,IL17RC,IL17RC,IL17RC,IL17RC	-55,-55,35308,-55,-31,-55,-55,-55
chr14:35451818-35452134	chr14	+	35451900	35452122	True	NM_182648,NM_003136,NM_001146282	chr14,chr14,chr14	-,+,+	BAZ1A,SRP54,SRP54	-107047,-8,-8
chr11:67095787-67097335	chr11	+	67096087	67097020	True	NM_021173,NR_024469	chr11,chr11	-,+	POLD4,LOC100130987	24090,-10828
chr3:33864442-33866015	chr3	+	33864613	33865623	True	NM_015097,NR_027867	chr3,chr3	-,+	CLASP2,PDCD6IP	-104765,4506
chr4:122763261-122764288	chr4	+	122763912	122764332	True	NM_005033,NM_001237	chr4,chr4	+,-	EXOSC9,CCNA2	-41498,-18824
chr12:121120743-121121962	chr12	+	121120841	121121682	True	NM_014730,NM_198202	chr12,chr12	+,-	MLEC,POP5	3266,-101640
chr9:104355538-104357061	chr9	+	104355545	104357052	True	NM_019592,NM_147180	chr9,chr9	+,-	RNF20,PPP3R2	-59463,281
chr2:219645809-219646447	chr2	+	219645873	219646479	True	NM_000784,NM_017431	chr2,chr2	+,-	CYP27A1,PRKAG3	-8,50083
chr9:140066257-140066468	chr9	+	140066293	140066437	True	NM_001013653,NR_037416,NM_003731	chr9,chr9,chr9	-,-,+	LRRC26,MIR3621,SSNA1	-1802,-2571,16616
chr5:141483238-141484711	chr5	+	141483878	141484498	True	NM_005471,NM_030571	chr5,chr5	-,+	GNPDA1,NDFIP1	-91258,3825
chr12:82151351-82152115	chr12	+	82151435	82152098	True	NM_032230,NM_003625	chr12,chr12	+,-	C12orf26,PPFIA2	600177,1062
chr2:128158627-128158846	chr2	+	128158672	128158851	True	NM_000312,NM_006609	chr2,chr2	+,-	PROC,MAP3K2	17144,-57902
chr19:14776213-14776942	chr19	+	14776219	14776289	True	NM_032433,NM_032571	chr19,chr19	+,-	ZNF333,EMR3	24580,9493
chr1:57155246-57155927	chr1	+	57155409	57155734	True	NM_003713,NM_006252	chr1,chr1	-,+	PPAP2B,PRKAA2	-110152,-44470
chr1:46153857-46155589	chr1	+	46153980	46155103	True	NM_021639,NM_016486	chr1,chr1	-,+	GPBP1L1,TMEM69	-1678,-184
chr11:34462200-34463869	chr11	+	34462457	34463486	True	NM_001752,NM_198381	chr11,chr11	+,-	CAT,ELF5	-2043,69920
chr17:81008838-81009305	chr17	+	81009074	81009354	True	NM_001004431	chr17	+	METRNL	28212
chr7:56118591-56119054	chr7	+	56118746	56119054	True	NM_001762,NM_004577,NR_002957,NM_001009186	chr7,chr7,chr7,chr7	+,-,+,+	CCT6A,PSPH,SNORA15,CCT6A	323,264,9108,323
chr1:27816015-27816241	chr1	+	27816019	27816273	True	NM_005281,NM_001201404,NM_006990	chr1,chr1,chr1	+,-,-	GPR3,WASF2,WASF2	-96918,455,455
chr17:7943785-7944294	chr17	+	7943992	7944328	True	NM_001141,NM_001139,NM_001039131,NM_001039130	chr17,chr17,chr17,chr17	+,-,+,+	ALOX15B,ALOX12B,ALOX15B,ALOX15B	-1685,46743,-1685,-1685
chr16:90129700-90131420	chr16	+	90130088	90130767	True	NM_052996,NR_023348	chr16,chr16	-,+	PRDM7,GAS8	-1355,-41143
chrX:40127103-40127921	chrX	+	40127218	40127581	True	NM_001123384,NM_005765	chrX,chrX	-,+	BCOR,ATP6AP2	-90636,312634
chr10:99447565-99447968	chr10	+	99447596	99448008	True	NM_021732,NM_031484	chr10,chr10	-,+	AVPI1,MARVELD1	-581,25456
chr2:162166526-162167293	chr2	+	162166684	162167340	True	NM_001935,NM_005805	chr2,chr2	-,+	DPP4,PSMD14	763762,-1960
chr11:62692783-62692995	chr11	+	62692783	62693025	True	NR_037193,NM_000738	chr11,chr11	+,-	SLC3A2,CHRM1	-43667,-3771
chr7:156741853-156742178	chr7	+	156741867	156742227	True	NM_022458,NM_138400	chr7,chr7	-,+	LMBR1,NOM1	-55965,189
chr16:56458722-56458967	chr16	+	56458811	56459015	True	NM_018233,NM_001144	chr16,chr16	+,-	OGFOD1,AMFR	26408,479
chr8:23022686-23024008	chr8	+	23023016	23023692	True	NM_003840,NR_033928	chr8,chr8	-,+	TNFRSF10D,LOC389641	-1476,59041
chr17:57188005-57189588	chr17	+	57188192	57189164	True	NM_001005207,NM_015294,NM_018304	chr17,chr17,chr17	-,-,+	TRIM37,TRIM37,PRR11	-3926,-3926,43695
chr4:124595806-124596719	chr4	+	124596098	124596736	True	NM_198041,NR_027105	chr4,chr4	-,+	NUDT6,LOC285419	-751975,-22209
chr9:35752899-35753251	chr9	+	35752903	35753239	True	NM_020944,NM_001080496,NM_001044264	chr9,chr9,chr9	-,+,-	GBA2,RGP1,MSMP	-3678,-3677,1085
chr11:76740926-76742259	chr11	+	76741097	76742054	True	NM_182833,NM_138706	chr11,chr11	-,+	GDPD4,B3GNT6	256459,3380
chr12:121418059-121419058	chr12	+	121418810	121419076	True	NR_024345,NM_000545	chr12,chr12	-,+	NCRNA00262,HNF1A	-8715,-2320
chr9:139658464-139658736	chr9	+	139658658	139658732	True	NM_178469,NM_203347,NR_033913	chr9,chr9,chr9	-,-,+	LCN8,LCN15,LOC100128593	-5927,283,-18096
chr19:45737258-45737585	chr19	+	45737257	45737389	True	NM_001199867,NM_138568	chr19,chr19	+,-	MARK4,EXOC3L2	17126,130
chr6:55443319-55443796	chr6	+	55443371	55443595	True	NM_207410,NM_019036,NM_001042406	chr6,chr6,chr6	+,-,-	GFRAL,HMGCLL1,HMGCLL1	-251155,467,467
chr19:21580256-21580928	chr19	+	21580301	21580971	True	NM_175910,NM_145326,NM_001076678,NM_021269	chr19,chr19,chr19,chr19	+,+,+,-	ZNF493,ZNF493,ZNF493,ZNF708	-431,-431,-431,-68089
chrX:100238100-100238436	chrX	+	100238142	100238233	True	NM_212559,NM_001162491	chrX,chrX	-,+	XKRX,ARL13A	-54244,-13496
chr11:5268538-5269265	chr11	+	5268702	5269290	True	NM_000559,NR_001589,NM_000184,NM_001004750	chr11,chr11,chr11,chr11	-,-,-,+	HBG1,HBBP1,HBG2,OR51B6	1847,-3880,6771,103447
chr1:161284390-161284775	chr1	+	161284467	161284653	True	NM_003001,NM_001035511,NM_000530,NM_001035513,NM_001035512	chr1,chr1,chr1,chr1,chr1	+,+,-,+,+	SDHC,SDHC,MPZ,SDHC,SDHC	-352,-352,-4705,-352,-352
chr3:127302672-127303745	chr3	+	127302806	127303736	True	NM_004526,NM_016372,NM_001136053,NM_001142646	chr3,chr3,chr3,chr3	+,-,-,-	MCM2,TPRA1,TPRA1,TPRA1	13516,-3526,5810,5882
chr2:201353155-201354880	chr2	+	201353155	201354805	True	NM_152387,NM_001160046	chr2,chr2	-,+	KCTD18,SGOL2	20038,36059
chr16:454397-454720	chr16	+	454518	454607	True	NM_020664,NM_021259,NM_005009	chr16,chr16,chr16	+,-,+	DECR2,TMEM8A,NME4	-2718,-22568,-7384
chr1:38019919-38020179	chr1	+	38019930	38020028	True	NM_024700,NM_003462	chr1,chr1	-,+	SNIP1,DNALI1	-27,2491
chr7:100212251-100212575	chr7	+	100212393	100212623	True	NM_003227,NM_001040097,NM_001040098,NM_001040099,NM_023948	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	TFR2,MOSPD3,MOSPD3,MOSPD3,MOSPD3	26600,-2719,-2391,-2330,-2330
chrX:103399930-103400444	chrX	+	103399963	103400442	True	NM_001012755,NM_207318	chrX,chrX	-,+	MCART6,FAM199X	1317,10858
chr15:79725034-79725326	chr15	+	79725137	79725373	True	NM_015206,NM_002891	chr15,chr15	+,-	KIAA1024,RASGRF1	-330,-341922
chr3:127310920-127311319	chr3	+	127310979	127311155	True	NM_004526,NM_001136053,NM_001142646	chr3,chr3,chr3	+,-,-	MCM2,TPRA1,TPRA1	6097,-1483,-1411
chr6:80727154-80728052	chr6	+	80727279	80728060	True	NM_022726,NM_003318	chr6,chr6	-,+	ELOVL4,TTK	-69964,-13008
chr2:113764034-113766028	chr2	+	113764056	113765757	True	NM_014440,NM_014438	chr2,chr2	+,-	IL1F6,IL1F8	-658,44733
chr3:196232193-196232639	chr3	+	196232252	196232436	True	NM_001105573,NM_152617,NM_001077657	chr3,chr3,chr3	+,-,-	FBXO45,RNF168,C3orf43	63288,-1613,9851
chr15:59069543-59071119	chr15	+	59069618	59070827	True	NM_001040450,NM_001110,NM_001040453	chr15,chr15,chr15	+,-,+	FAM63B,ADAM10,FAM63B	-6288,-27441,-6288
chrX:62672186-62672557	chrX	+	62672398	62672606	True	NM_001010888,NM_001012968	chrX,chrX	+,-	ZC3H12B,SPIN4	2036008,-101180
chr1:17379989-17380471	chr1	+	17379990	17380496	True	NM_014675,NM_003000	chr1,chr1	+,-	CROCC,SDHB	-131596,219
chrX:100129179-100129623	chrX	+	100129198	100129610	True	NM_001325,NM_013955,NM_007052	chrX,chrX,chrX	+,-,-	CSTF2,NOX1,NOX1	-53901,0,0
chr11:65558060-65558670	chr11	+	65558087	65558645	True	NM_138368,NM_004561	chr11,chr11	-,+	DKFZp761E198,OVOL1	-10265,-3609
chr20:49130007-49131576	chr20	+	49130137	49131618	True	NM_080829,NM_002827	chr20,chr20	-,+	FAM65C,PTPN1	121858,-3306
chr16:21225630-21226042	chr16	+	21225632	21225738	True	NM_145865,NM_003460	chr16,chr16	+,-	ANKS4B,ZP2	19277,-2764
chr12:112546621-112546961	chr12	+	112546627	112546945	True	NM_001143906,NM_024953	chr12,chr12	+,-	TRAFD1,NAA25	16403,2
chr6:46277849-46278230	chr6	+	46277946	46278254	True	NM_005822,NM_014936	chr6,chr6	-,+	RCAN2,ENPP4	15327,-180309
chr9:101556323-101557998	chr9	+	101556517	101557925	True	NM_173551,NM_024642	chr9,chr9	-,+	ANKS6,GALNT12	919,12055
chr1:112533730-112533930	chr1	+	112533853	112533929	True	NM_172198,NM_007204,NM_004980	chr1,chr1,chr1	-,+,-	KCND3,DDX20,KCND3	-2076,-235714,-2076
chr20:62885516-62885965	chr20	+	62885540	62885984	True	NM_001104925,NM_005286	chr20,chr20	+,-	PCMTD2,NPBWR2	1063,-147356
chr20:57616644-57617466	chr20	+	57616888	57617326	True	NR_037930,NR_037929,NM_006886,NM_016045,NM_001001977,NM_030773	chr20,chr20,chr20,chr20,chr20,chr20	-,-,-,-,-,+	SLMO2-ATP5E,SLMO2-ATP5E,ATP5E,SLMO2,ATP5E,TUBB1	625,625,-9488,625,-9466,-22630
chr1:162343933-162344344	chr1	+	162343946	162344326	True	NM_182581,NM_001085375,NM_001135240	chr1,chr1,chr1	-,+,+	C1orf111,C1orf226,C1orf226	2368,7193,4369
chr8:41750248-41750509	chr8	+	41750248	41750482	True	NM_001134296,NM_001142446	chr8,chr8	+,-	AP3M2,ANK1	259981,3848
chr17:39993000-39993233	chr17	+	39993115	39993219	True	NM_052935,NR_033464,NR_033465,NM_152467	chr17,chr17,chr17,chr17	-,-,-,+	NT5C3L,NT5C3L,NT5C3L,KLHL10	-592,-627,-592,823
chr16:51187144-51187591	chr16	+	51187279	51187563	True	NM_002968,NM_001042412,NM_001127892	chr16,chr16,chr16	-,+,-	SALL1,CYLD,SALL1	-2096,-411301,-2771
chr16:31276835-31278347	chr16	+	31277352	31277654	True	NM_001145808,NM_000632,NM_152901	chr16,chr16,chr16	+,+,-	ITGAM,ITGAM,PYDC1	-6115,-6115,-48957
chr6:44213734-44214095	chr6	+	44213763	44214101	True	NM_007355,NM_178148	chr6,chr6	+,-	HSP90AB1,SLC35B2	747,11232
chr5:114879139-114879797	chr5	+	114879142	114879719	True	NM_020177,NM_001284	chr5,chr5	-,+	FEM1C,AP3S1	922,297899
chr11:48236550-48236781	chr11	+	48236578	48236809	True	NM_001005470,NM_001005513	chr11,chr11	+,-	OR4B1,OR4C45	1552,137241
chr2:129274182-129274732	chr2	+	129274182	129274611	True	NM_004807,NR_027671	chr2,chr2	-,+	HS6ST1,UGGT1	-198011,-425456
chr17:58041845-58042087	chr17	+	58041850	58042044	True	NM_003161,NM_016125	chr17,chr17	+,-	RPS6KB1,RNFT1	-71458,123
chr2:151342368-151342605	chr2	+	151342373	151342463	True	NM_007115,NM_005168	chr2,chr2	+,-	TNFAIP6,RND3	871642,1767
chr1:9708367-9708879	chr1	+	9708367	9708763	True	NR_027045,NM_005026	chr1,chr1	-,+	C1orf200,PIK3CD	5931,3026
chr1:156714460-156714731	chr1	+	156714479	156714723	True	NM_015997,NM_001126051,NM_001126050,NM_004494,NM_145729,NM_024540	chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,-,-,-	RRNAD1,HDGF,HDGF,HDGF,MRPL24,MRPL24	-16267,7351,7567,6870,-3556,-3556
chr4:135122901-135123455	chr4	+	135122903	135123473	True	NM_032961,NM_001114734	chr4,chr4	+,-	PCDH10,PABPC4L	-1052484,0
chr1:50540208-50541590	chr1	+	50540277	50541219	True	NM_032785,NM_001144777	chr1,chr1	-,+	AGBL4,ELAVL4	-50651,-26643
chr14:47767807-47768046	chr14	+	47767816	47767884	True	NM_182830,NM_020937	chr14,chr14	-,+	MDGA2,FANCM	44610,-2162731
chr20:42295118-42295501	chr20	+	42295121	42295397	True	NM_001008901,NM_002466	chr20,chr20	-,+	GTSF1L,MYBL2	60295,311
chr1:245030143-245030616	chr1	+	245030183	245030406	True	NM_004501,NM_198076,NM_031844	chr1,chr1,chr1	-,+,-	HNRNPU,FAM36A,HNRNPU	-2356,-31608,-2356
chr2:73611602-73612710	chr2	+	73611646	73612567	True	NM_001965,NM_015120	chr2,chr2	-,+	EGR4,ALMS1	-90817,318
chr7:1607351-1607972	chr7	+	1607426	1607994	True	NR_021487,NR_027328,NM_032302,NM_001134340,NR_027329	chr7,chr7,chr7,chr7,chr7	+,+,-,-,+	KIAA1908,KIAA1908,PSMG3,PSMG3,KIAA1908	1714,1714,1685,1724,1714
chr4:39363581-39364425	chr4	+	39363775	39364425	True	NM_002913,NM_001204747,NM_175737	chr4,chr4,chr4	-,-,+	RFC1,RFC1,KLB	3636,3636,44047
chr1:2484156-2484496	chr1	+	2484299	2484403	True	NR_037844,NR_026927,NM_003820	chr1,chr1,chr1	-,-,+	LOC100133445,LOC115110,TNFRSF14	4097,-15,3401
chr1:2484156-2484496	chr1	-	2500154	2500258	False	NR_037844,NM_003820	chr1,chr1	-,+	LOC100133445,TNFRSF14	-11704,-12400
chr2:44393605-44394952	chr2	+	44393635	44394779	True	NM_001033557,NM_001033556,NM_177969,NM_177968,NM_002706,NM_133259	chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,+,-	PPM1B,PPM1B,PPM1B,PPM1B,PPM1B,LRPPRC	1220,1220,1220,1220,1220,-170491
chr2:190307003-190307466	chr2	+	190307003	190307347	True	NM_032168,NM_014585	chr2,chr2	+,-	WDR75,SLC40A1	-908,138240
chr12:120968883-120969719	chr12	+	120969247	120969552	True	NM_014868,NM_032314	chr12,chr12	+,-	RNF10,COQ5	2579,-2283
chr16:22827478-22828042	chr16	+	22827485	22828041	True	NR_037517,NM_006043	chr16,chr16	-,+	MIR548AA2,HS3ST2	-24122,-1683
chr14:60193904-60194229	chr14	+	60193972	60194266	True	NM_016475,NM_206857	chr14,chr14	+,-	JKAMP,RTN1	-242862,215
chr1:158613849-158615630	chr1	+	158614037	158615393	True	NM_001004478,NM_003126	chr1,chr1	+,-	OR10Z1,SPTA1	-37860,41163
chr5:99886766-99887668	chr5	+	99886767	99887264	True	NR_027503,NM_198507	chr5,chr5	-,+	LOC100133050,FAM174A	-162809,-15695
chr20:35272209-35273191	chr20	+	35272415	35273235	True	NM_175077,NM_032214,NR_026562	chr20,chr20,chr20	-,-,+	SLA2,SLA2,C20orf24	1373,1373,-38329
chr12:72663734-72664963	chr12	+	72663849	72664982	True	NR_026837,NR_026836,NM_013381	chr12,chr12,chr12	-,-,+	LOC283392,LOC283392,TRHDE	2358,2358,1546
chr12:48723535-48723862	chr12	+	48723578	48723882	True	NM_001172681,NM_181788	chr12,chr12	-,+	ZNF641,H1FNT	20842,-866
chr4:153701274-153701606	chr4	+	153701316	153701542	True	NM_001025595,NM_014447,NM_145720,NM_001025593	chr4,chr4,chr4,chr4	+,+,-,+	ARFIP1,ARFIP1,TIGD4,ARFIP1	-255,-255,-400,-255
chr16:20688823-20689888	chr19	+	21791675	21791732	True	NM_001001415,NM_173531	chr19,chr19	+,-	ZNF429,ZNF100	-103296,158755
chrX:54527473-54529218	chrX	+	54527585	54529245	True	NM_004463,NM_001184819	chrX,chrX	-,+	FGD1,GNL3L	-4986,27398
chr14:94254173-94254455	chr14	+	94254211	94254493	True	NM_138344,NM_178013	chr14,chr14	+,-	FAM181A,PRIMA1	130764,323
chr4:100011010-100012902	chr4	+	100011012	100012823	True	NM_000671,NR_037884	chr4,chr4	-,+	ADH5,LOC100507053	-1081,-1055
chr1:26394387-26395040	chr1	+	26394502	26395048	True	NR_026685,NM_032588	chr1,chr1	+,-	PDIK1L,TRIM63	42607,-381
chr16:11036608-11038178	chr16	+	11036706	11038173	True	NM_014015,NM_015226	chr16,chr16	-,+	DEXI,CLEC16A	-449,171
chr16:76308912-76309626	chr16	+	76308914	76309514	True	NM_005548,NM_033401	chr16,chr16	-,+	KARS,CNTNAP4	-627329,1661
chr20:31260655-31261122	chr20	+	31260724	31260898	True	NR_034152,NM_182584	chr20,chr20	+,-	LOC149950,C20orf203	-85494,-20941
chr10:16480674-16482324	chr10	+	16480940	16481963	True	NM_001001484,NM_001010908,NM_030664	chr10,chr10,chr10	+,-,+	PTER,C1QL3,PTER	-2036,82092,-2036
chr12:111841366-111841786	chr12	+	111841375	111841443	True	NM_144671,NM_005475	chr12,chr12	-,+	FAM109A,SH2B3	-34450,2308
chr22:41776424-41776632	chr22	+	41776457	41776643	True	NM_003216,NM_016272	chr22,chr22	+,-	TEF,TOB2	1319,66434
chr5:72746809-72747073	chr5	+	72746815	72747005	True	NM_004472,NM_001037637	chr5,chr5	-,+	FOXD1,BTF3	-2463,47244
chr5:1551087-1551617	chr5	+	1551093	1551620	True	NM_024830,NM_004553	chr5,chr5	-,+	LPCAT1,NDUFS6	-27017,249875
chr7:76167447-76169055	chr7	+	76167672	76168766	True	NR_029411,NR_003262	chr7,chr7	+,-	LOC100133091,FDPSL2A	9891,-63355
chr7:76167447-76169055	chr7	-	44041552	44041602	False	NM_175064,NR_003655	chr7,chr7	+,-	SPDYE1,POLR2J4	-1114,17196
chr18:77621571-77622565	chr18	+	77621571	77622601	True	NM_012283,NM_001146343	chr18,chr18	+,-	KCNG2,PQLC1	1066,89102
chr2:207507232-207507546	chr2	+	207507260	207507594	True	NM_001093730,NM_001102659	chr2,chr2	-,+	DYTN,LOC200726	75576,-169
chr8:23700973-23702598	chr8	+	23701102	23702566	True	NM_003155,NM_016612	chr8,chr8	-,+	STC1,SLC25A37	9805,-314790
chr19:49529191-49529778	chr19	+	49529224	49529414	True	NM_000894,NM_000737,NM_033378,NR_024244	chr19,chr19,chr19,chr19	-,-,+,-	LHB,CGB,CGB2,SNAR-G2	-8877,-1631,5715,5680
chr19:49529191-49529778	chr19	+	49542366	49542433	False	NR_024244,NM_033378,NR_004383,NM_033377,NM_033043,NM_033183	chr19,chr19,chr19,chr19,chr19,chr19	-,+,+,-,+,-	SNAR-G2,CGB2,SNAR-G1,CGB1,CGB5,CGB8	-7322,-7287,-2140,-2175,4668,9988
chr3:48600284-48601322	chr3	+	48600488	48601150	True	NM_033629,NM_004567,NM_033199	chr3,chr3,chr3	+,-,-	TREX1,PFKFB4,UCN2	-93310,-6261,101
chr1:45953677-45954597	chr1	+	45953934	45954556	True	NM_007170,NM_015506	chr1,chr1	-,+	TESK2,MMACHC	2334,11299
chr11:33881259-33882164	chr11	+	33881289	33881919	True	NM_001142316,NM_203364,NM_001142315	chr11,chr11,chr11	-,+,-	LMO2,CAPRIN1,LMO2	9502,191310,9640
chr11:76570082-76571700	chr11	+	76570382	76571579	True	NM_018367,NR_024042	chr11,chr11	+,-	ACER3,GUCY2E	337,-137549
chr8:10530329-10532223	chr8	+	10530788	10532236	True	NM_001040032,NM_178857	chr8,chr8	+,-	C8orf74,RP1L1	-692,-18171
chr2:27887425-27888182	chr2	+	27887462	27888156	True	NM_014860,NM_018158	chr2,chr2	-,+	SUPT7L,SLC4A1AP	-1013,-1182
chr7:2395140-2395411	chr7	+	2395142	2395442	True	NM_013321,NM_001037283,NM_003751	chr7,chr7,chr7	-,+,+	SNX8,EIF3B,EIF3B	-41043,-719,-719
chr7:102214429-102215467	chr7	+	102214837	102215231	True	NM_001166339,NM_001097615	chr7,chr7	+,-	SPDYE2L,POLR2J3	-23209,-1769
chr7:102214429-102215467	chr7	+	102313909	102314303	False	NM_032959,NM_001166339	chr7,chr7	-,+	POLR2J2,SPDYE2L	-1727,-23188
chr7:102214429-102215467	chr7	+	44060624	44060960	False	NR_015401,NR_003655	chr7,chr7	+,-	FLJ35390,POLR2J4	17737,-1876
chr8:11929151-11929952	chr8	+	11929337	11929794	True	NM_001195257,NM_001037804,NM_001039615	chr8,chr8,chr8	-,-,+	LOC100133267,DEFB130,ZNF705D	-81,-81,17052
chr8:11929151-11929952	chr8	+	12175906	12176362	False	NM_001195257,NM_001037804,NR_026789	chr8,chr8,chr8	-,-,+	LOC100133267,DEFB130,FAM66A	-81,-81,43165
chr19:49624956-49625190	chr19	+	49625178	49625238	True	NM_018111,NM_003660,NM_022165	chr19,chr19,chr19	-,+,+	C19orf73,PPFIA3,LIN7B	-2781,-2566,-7611
chr6:32295227-32295875	chr6_qbl_hap6	+	3556514	3556595	False	NM_019111,NM_006781	chr6_qbl_hap6,chr6_qbl_hap6	+,-	HLA-DRA,C6orf10	111891,43990
chr6:32295227-32295875	chr6_dbb_hap3	+	3574586	3574667	False	NM_019111,NM_006781	chr6_dbb_hap3,chr6_dbb_hap3	+,-	HLA-DRA,C6orf10	111064,43972
chr6:32295227-32295875	chr6_mann_hap4	+	3638152	3638233	False	NM_019111,NM_006781	chr6_mann_hap4,chr6_mann_hap4	+,-	HLA-DRA,C6orf10	111445,44323
chr6:32295227-32295875	chr6	+	32295313	32295394	True	NM_019111,NM_006781	chr6,chr6	+,-	HLA-DRA,C6orf10	112224,44323
chr6:32295227-32295875	chr6_cox_hap2	+	3766118	3766199	False	NM_019111,NM_006781	chr6_cox_hap2,chr6_cox_hap2	+,-	HLA-DRA,C6orf10	111874,43978
chr22:25399672-25400077	chr22	+	25399671	25399798	True	NM_001001663,NM_001145206	chr22,chr22	-,+	TMEM211,KIAA1671	-64357,24142
chr4:986491-987310	chr4	+	986509	987331	True	NM_022042,NM_000203,NM_134425,NM_213613	chr4,chr4,chr4,chr4	-,+,-,-	SLC26A1,IDUA,SLC26A1,SLC26A1	-38,-5775,-38,3
chr7:135410684-135411917	chr7	+	135410867	135411831	True	NM_001130929,NM_012450	chr7,chr7	+,-	PL-5283,SLC13A4	-63697,1152
chr6:154652323-154653523	chr6	+	154652851	154653575	True	NM_001130699,NM_001145287	chr6,chr6	-,+	IPCEF1,OPRM1	-1636,-245274
chr20:1096534-1098077	chr20	+	1096691	1097966	True	NM_018354,NM_006814,NM_178578	chr20,chr20,chr20	-,+,+	C20orf46,PSMF1,PSMF1	67203,1273,-2836
chrX:106448431-106449079	chrX	+	106448550	106449124	True	NM_001169154,NM_017681,NR_033676,NM_173494	chrX,chrX,chrX,chrX	+,-,-,+	CXorf41,NUP62CL,NUP62CL,CXorf41	737,596,596,737
chr3:121379697-121381436	chr3	+	121379748	121381068	True	NM_005335,NM_016298	chr3,chr3	-,+	HCLS1,FBXO40	43,-67629
chr2:71165862-71166207	chr2	+	71165871	71166143	True	NM_144582,NM_001692	chr2,chr2	-,+	TEX261,ATP6V1B1	55908,-2924
chr16:75599102-75599716	chr16	+	75599126	75599730	True	NM_001077418,NM_001077419,NM_001077416,NM_007285	chr16,chr16,chr16,chr16	-,-,-,+	TMEM231,TMEM231,TMEM231,GABARAPL2	-8956,-8956,-8990,518
chr6:39195296-39196086	chr6	+	39195315	39196085	True	NM_003740,NM_002062	chr6,chr6	-,+	KCNK5,GLP1R	1216,-178809
chr22:43505394-43505597	chr22	+	43505575	43505645	True	NM_001197,NR_027779	chr22,chr22	+,-	BIK,TTLL1	1111,-20141
chr16:24550664-24551000	chr16	+	24550690	24551034	True	NM_032626,NM_001006634,NM_018703,NM_006910	chr16,chr16,chr16,chr16	+,-,+,+	RBBP6,ARHGAP17,RBBP6,RBBP6	-39,475691,-39,-39
chr16:71842696-71843066	chr16	+	71842798	71842948	True	NM_001128,NM_001137675,NM_001030007	chr16,chr16,chr16	-,+,-	AP1G1,ATXN1L,AP1G1	78,36950,78
chrX:7137411-7138680	chrX	+	7137441	7138572	True	NM_000351,NM_001178135	chrX,chrX	+,-	STS,HDHD1	-20,-71210
chr10:76867493-76867995	chr10	+	76867647	76867959	True	NM_001007271,NM_001007273,NM_001007272,NM_016364,NM_144660,NM_001174156	chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,+,+	DUSP13,DUSP13,DUSP13,DUSP13,SAMD8,SAMD8	1061,1061,1061,-8399,3433,3433
chr6:144641148-144642696	chr6	+	144641540	144642516	True	NM_007124,NM_031287	chr6,chr6	+,-	UTRN,SF3B5	-28718,-224786
chr12:120316293-120317008	chr12	+	120316292	120316968	True	NM_207311,NM_007174	chr12,chr12	+,-	CCDC64,CIT	110679,-1200
chr14:96971195-96971585	chr14	+	96971218	96971594	True	NM_018036,NM_032632	chr14,chr14	-,+	ATG2B,PAPOLA	-141540,-2553
chr14:24834945-24835538	chr14	+	24834969	24835490	True	NM_001198966,NM_001136022,NM_001198965,NM_006871,NM_004554,NM_001198967	chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,-,+,+	NFATC4,NFATC4,NFATC4,RIPK3,NFATC4,NFATC4	2811,654,1735,-25727,1735,654
chr7:107233105-107234248	chr7	+	107233580	107234286	True	NM_001008405,NM_001161520	chr7,chr7	+,-	BCAP29,COG5	-12427,-28621
chr18:54319001-54320528	chr18	+	54319093	54320421	True	NM_052834,NM_015285,NR_024546	chr18,chr18,chr18	+,+,-	WDR7,WDR7,TXNL1	-528,-528,-13173
chr1:6761989-6762263	chr1	+	6762063	6762197	True	NM_018198,NM_138350	chr1,chr1	-,+	DNAJC11,THAP3	-97,-76904
chr22:32876747-32878328	chr22	+	32877512	32878310	True	NM_174932,NM_012179,NM_001033024	chr22,chr22,chr22	-,+,+	BPIL2,FBXO7,FBXO7	-24139,-6863,-6346
chr13:44363558-44364513	chr13	+	44363689	44364489	True	NM_017993,NM_001128303	chr13,chr13	-,+	ENOX1,C13orf31	-2583,88930
chr4:89514478-89515954	chr4	+	89514573	89515960	True	NM_032906,NM_014606	chr4,chr4	-,+	PIGY,HERC3	-69618,-977
chr7:150948214-150948611	chr7	+	150948286	150948578	True	NR_030407,NM_001003801	chr7,chr7	+,-	MIR671,SMARCD3	-12830,-2537
chr7:102215467-102216242	chr7	+	102215593	102216229	True	NM_001166339,NM_001097615	chr7,chr7	+,-	SPDYE2L,POLR2J3	-23965,-2525
chr7:102215467-102216242	chr7	+	44061322	44061893	False	NR_015401,NR_003655	chr7,chr7	+,-	FLJ35390,POLR2J4	16804,-2574
chr7:102215467-102216242	chr7	+	102314665	102315302	False	NM_032959,NM_001166339	chr7,chr7	-,+	POLR2J2,SPDYE2L	-2483,-23944
chr14:22102528-22103687	chr14	+	22102689	22103606	True	NM_001001912,NM_001005466	chr14,chr14	+,-	OR4E2,OR10G2	29690,-47
chr15:89181613-89182018	chr15	+	89181779	89182011	True	NR_026645,NM_002201	chr15,chr15	-,+	DET1,ISG20	-91867,27
chr1:53793796-53794243	chr1	+	53793890	53794292	True	NM_004631,NM_033300,NM_033067,NM_001018054,NM_017522	chr1,chr1,chr1,chr1,chr1	-,-,+,-,-	LRP8,LRP8,DMRTB1,LRP8,LRP8	-164,-69,130779,-164,-164
chr17:26214442-26216424	chr17	+	26214445	26216164	True	NM_001076680,NM_016231	chr17,chr17	-,+	C17orf108,NLK	4301,153523
chr10:64564951-64565161	chr10	+	64564975	64565209	True	NM_000399,NM_032804	chr10,chr10	-,+	EGR2,ADO	10967,-510
chr9:67680922-67681276	chr9	+	67680964	67681180	True	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	113059,245580
chr9:67680922-67681276	chr9	+	44759726	44759776	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	230459,-1128996
chr9:67680922-67681276	chr9	-	45111222	45111272	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-121037,-1480492
chr9:67680922-67681276	chr9	+	46272047	46272097	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2641317,415468
chr9:67680922-67681276	chr9	-	47168443	47168493	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-3537713,-480928
chr17:73630026-73630635	chr17	+	73630025	73630643	True	NR_028439,NM_001162995,NM_004259	chr17,chr17,chr17	+,+,-	LOC643008,LOC643008,RECQL5	2031,-562,32672
chr5:171613808-171614680	chr5	+	171613808	171614555	True	NM_005990,NM_001171183	chr5,chr5	-,+	STK10,EFCAB9	841,6620
chr17:76022379-76024067	chr17	+	76022384	76023894	True	NM_018996,NM_001127198	chr17,chr17	+,-	TNRC6C,TMC6	-22117,101017
chr19:55135610-55136108	chr19	+	55135616	55135978	True	NM_006669,NM_001081639,NM_001081638,NM_001081637,NM_145057	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	LILRB1,LILRB1,LILRB1,LILRB1,CDC42EP5	-7038,5929,5929,5989,-151194
chr19:55135610-55136108	chr19	-	54790379	54790577	False	NM_001013,NM_005874,NM_001080978	chr19,chr19,chr19	+,-,-	RPS9,LILRB2,LILRB2	-85704,-5346,-5346
chr16:67466400-67466789	chr16	+	67466431	67466529	True	NM_013304,NM_000196	chr16,chr16	-,+	ZDHHC1,HSD11B2	-16092,-1446
chr5:76247969-76248921	chr5	+	76247979	76248809	True	NR_003014,NM_001882	chr5,chr5	-,+	SNORA47,CRHBP	127637,0
chr8:19178815-19180759	chr8	+	19179020	19180773	True	NM_001174159,NM_001174160,NM_001130518,NM_022071	chr8,chr8,chr8,chr8	+,+,-,+	SH2D4A,SH2D4A,CSGALNACT1,SH2D4A	-7595,-8001,279340,-8001
chr9:136891925-136892407	chr9	+	136892022	136892438	True	NM_003371,NR_015427	chr9,chr9	-,+	VAV2,NCRNA00094	-34576,-1512
chr18:574251-576140	chr18	+	574578	575734	True	NM_130386,NM_004066	chr18,chr18	-,+	COLEC12,CETN1	-73849,4634
chr6:137491882-137492504	chr6	+	137491885	137492463	True	NM_181309,NM_001008783,NM_052962,NM_181310	chr6,chr6,chr6,chr6	-,+,-,-	IL22RA2,SLC35D3,IL22RA2,IL22RA2	2381,-248541,2381,2381
chr17:40929387-40930292	chr17	+	40929572	40930192	True	NR_024462,NM_032353,NM_032387	chr17,chr17,chr17	-,+,+	LOC100190938,VPS25,WNK4	-16297,-4169,2456
chr16:12996617-12997152	chr16	+	12996751	12997085	True	NM_001145205,NM_001145204,NM_018340	chr16,chr16,chr16	+,+,-	SHISA9,SHISA9,CPPED1	-1325,-1325,-99007
chr17:20676300-20677302	chr17	+	20676554	20677315	True	NM_001190790,NM_001004306	chr17,chr17	+,-	CDRT15L2,CCDC144NL	-193568,122188
chr22:44356531-44356992	chr22	+	44356653	44356949	True	NM_138814,NM_015380	chr22,chr22	-,+	PNPLA5,SAMM50	-68760,-5443
chr8:37307908-37308689	chr8	+	37308008	37308722	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	244578,296892
chr12:19591845-19592164	chr12	+	19591987	19592213	True	NM_033123,NM_153207,NM_001114176	chr12,chr12,chr12	-,+,+	PLCZ1,AEBP2,AEBP2	-701069,394,394
chr11:63973267-63973610	chr11	+	63973388	63973654	True	NM_178443,NM_001160393,NM_031471	chr11,chr11,chr11	+,-,+	FERMT3,TRPT1,FERMT3	497,19737,497
chr22:19006748-19007217	chr22	+	19006818	19007154	True	NR_024157,NR_026651,NR_024159	chr22,chr22,chr22	-,+,+	DGCR11,DGCR10,DGCR9	28784,2982,-1522
chr3:163720294-163720726	chr3	+	163720368	163720581	True	NM_001080440,NR_033945	chr3,chr3	+,-	OTOL1,LOC647107	-2505823,-699279
chr10:96463846-96465115	chr10	+	96463943	96464897	True	NM_022451,NM_001128925	chr10,chr10	-,+	NOC3L,CYP2C18	-341260,-20750
chr11:131781696-131782046	chr11	+	131781700	131782054	True	NM_014758,NM_016522,NM_001144059,NM_001144058	chr11,chr11,chr11,chr11	-,+,+,+	SNX19,NTM,NTM,NTM	-995318,-1039,-1039,-1039
chr6:33338249-33339835	chr6_qbl_hap6	+	4570757	4571503	False	NM_001350,NM_002263	chr6_qbl_hap6,chr6_qbl_hap6	-,+	DAXX,KIFC1	-47715,20036
chr6:33338249-33339835	chr6_mcf_hap5	+	4812279	4813025	False	NM_001350,NM_001185181	chr6_mcf_hap5,chr6_mcf_hap5	-,+	DAXX,PFDN6	-47744,-81184
chr6:33338249-33339835	chr6	+	33338509	33339255	True	NM_001014433,NM_002263	chr6,chr6	-,+	CUTA,KIFC1	46868,20057
chr6:33338249-33339835	chr6_cox_hap2	+	4782342	4783088	False	NM_001350,NM_001185181	chr6_cox_hap2,chr6_cox_hap2	-,+	DAXX,PFDN6	-47731,-81177
chr22:37917489-37918269	chr22	+	37917495	37918105	True	NM_014550,NM_152243	chr22,chr22	-,+	CARD10,CDC42EP1	-2285,38365
chr1:110526189-110526761	chr1	+	110526380	110526776	True	NM_006621,NM_006492	chr1,chr1	+,-	AHCYL1,ALX3	531,86596
chr13:41886231-41886515	chr13	+	41886256	41886443	True	NM_001110798,NM_004294,NM_018527,NM_024561	chr13,chr13,chr13,chr13	+,-,+,+	NAA16,MTRF1,NAA16,NAA16	-967,-48543,-967,-967
chr2:951619-952036	chr2	+	951986	952070	True	NM_018968,NR_033880	chr2,chr2	+,-	SNTG2,LOC339822	-5483,-87874
chr13:108866447-108867270	chr13	+	108866525	108867149	True	NM_032859,NM_001098268,NM_206937,NM_002312	chr13,chr13,chr13,chr13	+,-,-,-	ABHD13,LIG4,LIG4,LIG4	3613,3617,783,31
chr15:101135401-101136925	chr15	+	101135669	101136928	True	NM_001040616,NM_198243,NM_024708	chr15,chr15,chr15	-,+,+	LINS,ASB7,ASB7	5567,5826,5826
chr8:43144741-43146485	chr8	+	43145134	43146441	True	NR_027669,NM_001005365,NM_001002920	chr8,chr8,chr8	-,+,+	RNF170,POTEA,POTEA	-393268,1143,1143
chr16:4786470-4787639	chr16	+	4786770	4787317	True	NM_133450,NM_139170	chr16,chr16	-,+	ANKS3,C16orf71	-2607,-2538
chrX:102973999-102974824	chrX	+	102974135	102974841	True	NM_001024452,NM_001172285,NM_182541	chrX,chrX,chrX	-,-,+	GLRA4,GLRA4,TMEM31	8761,8761,-8349
chr3:5159825-5160275	chr3	+	5159854	5160103	True	NR_037903,NM_018184	chr3,chr3	-,+	LOC100507582,ARL8B	-211668,3826
chr15:60769118-60770464	chr15	+	60769125	60770498	True	NM_012182,NM_001018089,NM_024611	chr15,chr15,chr15	+,-,-	FOXB1,NARG2,NARG2	-472768,896,896
chr18:21592053-21594012	chr18	+	21592065	21593888	True	NM_001135993,NR_024232,NM_018030	chr18,chr18,chr18	+,+,-	TTC39C,TTC39C,OSBPL1A	495,495,258365
chr12:13249262-13250436	chr12	+	13249438	13250492	True	NM_001080555,NM_153823,NM_031289,NM_020853,NM_001080554	chr12,chr12,chr12,chr12,chr12	-,-,-,+,-	GSG1,GSG1,GSG1,KIAA1467,GSG1	6185,-729,-729,-52174,6185
chr8:25903276-25903632	chr8	+	25903292	25903456	True	NM_002717,NM_022659	chr8,chr8	+,-	PPP2R2A,EBF2	245550,-900
chr17:40333332-40334517	chr17	+	40333550	40334312	True	NM_001524,NM_033194,NM_012285	chr17,chr17,chr17	-,+,-	HCRT,HSPB9,KCNH4	3208,-58845,-254
chr12:4484724-4486396	chr12	+	4484772	4486444	True	NM_020638,NM_020375	chr12,chr12	-,+	FGF23,C12orf5	2500,-54464
chr17:18261658-18262474	chr17	+	18261806	18262298	True	NM_004169,NM_148918,NM_001145127	chr17,chr17,chr17	-,-,+	SHMT1,SHMT1,EVPLL	4612,4612,18780
chr1:152082397-152082757	chr1	+	152082437	152082803	True	NR_024237,NM_007113	chr1,chr1	+,-	LOC100132111,TCHH	-271543,3803
chr7:131420771-131422196	chr7	+	131420862	131422222	True	NM_005397,NM_013255	chr7,chr7	-,+	PODXL,MKLN1	-179486,-408318
chr17:18583198-18584297	chr17	+	18583510	18584341	True	NM_001145045,NM_001037330,NR_026718	chr17,chr17,chr17	-,+,-	ZNF286B,TRIM16L,FOXO3B	1281,41060,-7016
chr17:18583198-18584297	chr17	-	15604266	15604711	False	NM_006470,NM_001130842,NM_020652	chr17,chr17,chr17	-,+,+	TRIM16,ZNF286A,ZNF286A	-18073,-1426,-1426
chr10:47378600-47378988	chr10	+	47378740	47378825	True	NR_024495,NR_027634	chr10,chr10	-,+	LOC642826,FAM35B2	-135246,894
chr10:47378600-47378988	chr10	+	88910134	88910205	False	NM_019054,NM_005271	chr10,chr10	+,-	FAM35A,GLUD1	-55236,-55358
chr10:47378600-47378988	chr10	+	46896660	46896745	False	NR_027632,NM_181519	chr10,chr10	+,-	FAM35B,SYT15	895,73907
chr10:47378600-47378988	chr10	+	49086410	49086495	False	NM_001137548,NM_002750	chr10,chr10	-,+	FAM25C,MAPK8	121381,523191
chr14:69673288-69675018	chr14	+	69673632	69674578	True	NM_003861,NR_034165	chr14,chr14	-,+	DCAF5,EXD2	-53718,-15207
chr11:66104991-66105868	chr11	+	66105004	66105734	True	NM_001024957,NM_015399,NM_004292,NM_153266,NM_006876	chr11,chr11,chr11,chr11,chr11	-,-,-,+,-	BRMS1,BRMS1,RIN1,TMEM151A,B3GNT1	6898,6898,-1004,-45682,9477
chr1:207991969-207992330	chr1	+	207992072	207992305	True	NR_029518,NR_026817	chr1,chr1	-,+	MIR29B2,LOC148696	-16204,-399
chr2:217363806-217364054	chr2	+	217363834	217364036	True	NM_000998,NM_020814	chr2,chr2	+,-	RPL37A,MARCH4	-370,-127084
chr9:139927203-139927845	chr9	+	139927243	139927701	True	NM_004479,NM_001606,NM_212533,NM_207511	chr9,chr9,chr9,chr9	-,-,-,+	FUT7,ABCA2,ABCA2,C9orf139	49,-4503,-3869,-5378
chr14:101195704-101196697	chr14	+	101195785	101196711	True	NM_003836,NM_001134888	chr14,chr14	+,-	DLK1,RTL1	-2634,154523
chr10:45475129-45475608	chr10	+	45475236	45475656	True	NM_007021,NM_032023	chr10,chr10	-,+	C10orf10,RASSF4	-906,-20068
chr1:242660354-242661357	chr1	+	242660375	242661067	True	NM_006027,NM_152666	chr1,chr1	+,-	EXO1,PLD5	-648401,26989
chr2:10954550-10955281	chr2	+	10954704	10955240	True	NM_005742,NM_144583	chr2,chr2	-,+	PDIA6,ATP6V1C2	-1744,-92981
chr19:42496629-42497156	chr19	+	42496725	42497051	True	NM_152296,NM_022752	chr19,chr19	-,+	ATP1A3,ZNF574	1381,83238
chr3:39447093-39447506	chr3	+	39447266	39447560	True	NM_001171174,NR_002325,NM_001012321,NM_002295,NR_002324	chr3,chr3,chr3,chr3,chr3	-,+,+,+,+	CX3CR1,SNORA6,RPSA,RPSA,SNORA62	-124040,2321,1550,643,4984
chr1:241518956-241519609	chr1	+	241518983	241519647	True	NM_002924,NM_003679	chr1,chr1	-,+	RGS7,KMO	881,176032
chr9:139746749-139747050	chr9	+	139746800	139747064	True	NM_003792,NM_014172,NM_206920,NM_001080482,NM_001135861	chr9,chr9,chr9,chr9,chr9	-,+,+,+,+	EDF1,PHPT1,MAMDC4,C9orf172,PHPT1	13724,-3595,-32,-7984,-3595
chrX:7160563-7162032	chrX	+	7160904	7161732	True	NM_000351,NM_001178135	chrX,chrX	+,-	STS,HDHD1	-23485,-94673
chr17:38657553-38657932	chr17	+	38657715	38657865	True	NM_032865,NM_001552	chr17,chr17	-,+	TNS4,IGFBP4	39,-58090
chr4:54656-55074	chr4	+	54655	55123	True	NM_182524,NM_001039127,NM_001137608	chr4,chr4,chr4	+,+,-	ZNF595,ZNF718,ZNF732	-1479,-1429,234871
chr11:32857621-32858284	chr11	+	32857729	32858331	True	NM_001008391,NM_024081	chr11,chr11	-,+	CCDC73,PRRG4	-41542,-6301
chr1:229407265-229407628	chr1	+	229407332	229407660	True	NM_145257,NM_004578	chr1,chr1	-,+	C1orf96,RAB4A	71078,-504
chr7:140177572-140177965	chr7	+	140177680	140178004	True	NM_013446,NM_001008749,NM_001145125	chr7,chr7,chr7	-,+,-	MKRN1,RAB19,MKRN1	1421,-73900,1421
chr15:40734612-40735166	chr15	+	40734666	40735023	True	NR_002208,NM_014952	chr15,chr15	-,+	MRPL42P5,BAHD1	89777,-1306
chr6:138820537-138821572	chr6	+	138820576	138821441	True	NM_001144060,NM_014320	chr6,chr6	-,+	NHSL1,HEBP2	3,-95298
chr16:71518372-71518579	chr16	+	71518428	71518602	True	NM_005769,NM_006961	chr16,chr16	+,-	CHST4,ZNF19	41420,4702
chr8:59322894-59323459	chr8	+	59322979	59323507	True	NM_000780,NM_001077619	chr8,chr8	-,+	CYP7A1,UBXN2B	89263,315
chr13:101186272-101187378	chr13	+	101186278	101187272	True	NM_001178004,NM_033110	chr13,chr13	+,-	PCCA,A2LD1	-445060,-222
chrX:131562821-131563871	chrX	+	131563012	131563907	True	NM_001042452,NM_018388,NM_133486	chrX,chrX,chrX	+,-,-	MST4,MBNL3,MBNL3	-405433,9870,9870
chr2:26370058-26370774	chr2	+	26370179	26370811	True	NM_000182,NM_001168241	chr2,chr2	-,+	HADHA,FAM59B	96833,25148
chr4:71853645-71854507	chr4	+	71853869	71854257	True	NM_002092,NM_000788	chr4,chr4	-,+	GRSF1,DCK	-148242,5007
chr1:28654132-28654779	chr1	+	28654424	28654497	True	NM_014280,NM_017638,NM_001127350	chr1,chr1,chr1	-,+,+	DNAJC8,MED18,MED18	-94882,1015,1015
chr17:26925603-26925817	chr17	+	26925611	26925787	True	NM_003170,NM_006461	chr17,chr17	+,-	SUPT6H,SPAG5	63514,319
chr6:36808892-36810172	chr6	+	36808891	36810159	True	NM_020939,NM_152734	chr6,chr6	-,+	CPNE5,C6orf89	-1671,43480
chr3:129039201-129039440	chr3	+	129039265	129039477	True	NM_006026,NR_026991	chr3,chr3	-,+	H1FX,C3orf47	-4145,-4202
chr6:122792974-122793424	chr6	+	122793052	122793440	True	NM_020755,NM_181794	chr6,chr6	-,+	SERINC1,PKIB	-100,-41
chr11:67137430-67137818	chr11	+	67137434	67137748	True	NM_001166212,NM_004584,NM_013246	chr11,chr11,chr11	-,+,-	CLCF1,RAD9A,CLCF1	3950,21674,3508
chr19:39323731-39324409	chr19	+	39323870	39324146	True	NM_001398,NM_001042507	chr19,chr19	-,+	ECH1,LGALS7B	-1373,-44071
chr8:82639031-82640465	chr8	+	82639366	82640491	True	NM_001170797,NM_001170796,NM_024699,NR_033196,NR_033194,NR_033195,NR_033193,NM_152284	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,-,-,-,+	ZFAND1,ZFAND1,ZFAND1,ZFAND1,ZFAND1,ZFAND1,ZFAND1,CHMP4C	-5827,-5827,-5827,-5827,-5827,-5827,-5827,4196
chr1:89647765-89648323	chr1	+	89647792	89648120	True	NM_198460,NM_207398	chr1,chr1	+,-	GBP6,GBP7	181315,-6069
chr19:45923957-45924472	chr19	+	45924008	45924418	True	NM_001166049,NM_202001,NM_012099,NM_001983	chr19,chr19,chr19,chr19	-,-,+,-	ERCC1,ERCC1,CD3EAP,ERCC1	2809,2452,-14592,2809
chr5:96275008-96275959	chr5	+	96275318	96276004	True	NM_001198541,NM_005575	chr5,chr5	-,+	ERAP1,LNPEP	-125470,-4035
chr12:10275526-10276080	chr12	+	10275557	10276087	True	NM_197949,NM_197948,NM_153022,NM_197954,NM_022570,NM_197950,NM_197947	chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,-,+,-,-,-,-	CLEC7A,CLEC7A,C12orf59,CLEC7A,CLEC7A,CLEC7A,CLEC7A	6831,6831,55469,6831,6831,6831,6831
chr1:183550307-183550894	chr1	+	183550470	183550540	True	NM_000433,NM_015149,NM_001127651,NM_001190794,NM_001190789	chr1,chr1,chr1,chr1,chr1	-,+,-,-,-	NCF2,RGL1,NCF2,NCF2,NCF2	9249,54667,9566,9249,9249
chr22:24952036-24952422	chr22	+	24952139	24952319	True	NM_004175,NM_031444	chr22,chr22	+,-	SNRPD3,C22orf13	-572,-864
chr7:30951752-30952922	chr7	+	30951782	30952864	True	NM_001185061,NM_001185060,NM_001185062,NM_001202481,NM_198098	chr7,chr7,chr7,chr7,chr7	+,+,+,-,+	AQP1,AQP1,AQP1,CRHR2,AQP1	8240,8050,8254,-212063,-418
chr3:107841150-107842139	chr3	+	107841197	107842167	True	NM_007072,NM_198793	chr3,chr3	+,-	HHLA2,CD47	179164,-31262
chr3:136471298-136471555	chr3	+	136471432	136471590	True	NM_001097599,NM_005862	chr3,chr3	+,-	TMEM22,STAG1	66270,-187
chr7:100286432-100287134	chr7	+	100286576	100286986	True	NM_005273,NM_022574	chr7,chr7	+,-	GNB2,GIGYF1	-15269,4
chr9:71791565-71792651	chr9	+	71791621	71792450	True	NM_001170630,NM_201629,NM_002732,NM_004817	chr9,chr9,chr9,chr9	+,+,-,+	TJP2,TJP2,PRKACG,TJP2	-2708,-2708,-162582,-2708
chr17:7284664-7285009	chr17	+	7284670	7284994	True	NM_003985,NM_001201576	chr17,chr17	+,-	TNK1,PLSCR3	-356,13218
chr17:45119325-45119647	chr17	+	45119481	45119548	True	NM_203400,NM_054022	chr17,chr17	-,+	RPRML,GOSR2	-62867,-119052
chr5:1343235-1343585	chr5	+	1343342	1343624	True	NM_182632,NM_030782	chr5,chr5	+,-	SLC6A18,CLPTM1L	-117923,1428
chr2:8114095-8115008	chr2	+	8114284	8114911	True	NM_002166,NR_015405	chr2,chr2	+,-	ID2,LOC339788	707201,2087
chr1:247497041-247498228	chr1	+	247497184	247498248	True	NM_032752,NM_173858	chr1,chr1	-,+	ZNF496,VN1R5	-2139,-77861
chr18:53257176-53257430	chr18	+	53257270	53257356	True	NM_003199,NM_001083962,NM_004163	chr18,chr18,chr18	-,-,+	TCF4,TCF4,RAB27B	-1410,-1410,-761481
chr19:56165305-56165593	chr19	+	56165322	56165604	True	NM_203374,NM_007279,NM_001012478,NM_013301	chr19,chr19,chr19,chr19	-,+,+,+	ZNF784,U2AF2,U2AF2,CCDC106	-29381,43,43,-6419
chr5:35852284-35853641	chr5	+	35852493	35853676	True	NM_002185,NM_001042625	chr5,chr5	+,-	IL7R,CAPSL	3314,85118
chr11:114183054-114184125	chr11	+	114183079	114183495	True	NM_019021,NM_006169	chr11,chr11	-,+	C11orf71,NNMT	87694,-16597
chr5:72745488-72746665	chr5	+	72745603	72746684	True	NM_004472,NM_001037637	chr5,chr5	-,+	FOXD1,BTF3	-1251,47565
chr6:170895322-170896280	chr6	+	170895477	170896116	True	NM_001172085,NM_001199461,NM_001199462,NM_001199463,NM_001199464,NM_002598	chr6,chr6,chr6,chr6,chr6,chr6	+,-,-,-,-,-	TBP,PDCD2,PDCD2,PDCD2,PDCD2,PDCD2	-32107,-1697,-1735,-1735,-1735,-1697
chr1:154378418-154379468	chr1	+	154378424	154379433	True	NM_001010846,NM_181359,NM_000565	chr1,chr1,chr1	-,+,+	SHE,IL6R,IL6R	95152,-806,-806
chr11:93529410-93529652	chr11	+	93529410	93529696	True	NM_001144871,NM_004268	chr11,chr11	-,+	C11orf90,MED17	54022,-12068
chr19:19753378-19753725	chr19	+	19753694	19753768	True	NM_033204,NM_016573	chr19,chr19	+,-	ZNF101,GMIP	25894,737
chr1:209761338-209761968	chr1	+	209761355	209761881	True	NM_020439,NR_036213	chr1,chr1	+,-	CAMK1G,MIR4260	-4361,35024
chr1:110167150-110167974	chr1	+	110167359	110167690	True	NM_139156,NM_005272,NM_203404,NM_004037	chr1,chr1,chr1,chr1	+,-,+,+	AMPD2,GNAT2,AMPD2,AMPD2	-4951,-11654,358,-4134
chr2:29204055-29204783	chr2	+	29204126	29204758	True	NM_199280,NM_001029883	chr2,chr2	+,-	FAM179A,C2orf71	-13,92419
chr12:100596001-100596489	chr12	+	100596001	100596399	True	NM_022496,NR_024261	chr12,chr12	+,-	ACTR6,GOLGA2B	-1487,-28880
chr1:6637810-6638575	chr1	+	6637908	6638520	True	NM_024654,NM_005341	chr1,chr1	-,+	NOL9,ZBTB48	-23250,1542
chr10:43633306-43633556	chr10	+	43633388	43633498	True	NM_018590,NM_145313	chr10,chr10	+,-	CSGALNACT2,RASGEF1A	435,128919
chr20:29524184-29524457	chr20	+	29524305	29524493	True	NM_001037731,NR_003579	chr20,chr20	-,+	DEFB116,FRG1B	371945,87385
chr19:48281756-48282002	chr19	+	48281760	48282032	True	NM_198479,NM_003009	chr19,chr19	-,+	TPRX1,SEPW1	24879,31
chr18:266830-267738	chr18	+	266833	267515	True	NM_005131,NM_005151	chr18,chr18	-,+	THOC1,USP14	594,-108401
chr16:22308202-22308674	chr16	+	22308230	22308470	True	NM_018119,NM_001802	chr16,chr16	+,-	POLR3E,CDR2	270,77518
chr18:599276-599870	chr18	+	599317	599461	True	NM_014410,NM_001012716	chr18,chr18	+,-	CLUL1,C18orf56	-2381,58937
chr6:117585988-117586199	chr6	+	117586092	117586160	True	NM_002944,NM_182645,NM_153453	chr6,chr6,chr6	-,+,+	ROS1,VGLL2,VGLL2	160908,576,560
chr8:124084236-124084728	chr8	+	124084257	124084699	True	NM_001145088,NM_024295,NM_145647	chr8,chr8,chr8	+,-,+	WDR67,DERL1,WDR67	220,-29609,220
chrX:69645712-69646049	chrX	+	69645735	69646049	True	NM_001171192,NM_001171193,NM_017711,NM_001171191,NM_016484	chrX,chrX,chrX,chrX,chrX	+,+,+,+,-	GDPD2,GDPD2,GDPD2,GDPD2,PDZD11	-2905,-2905,-2905,-2905,-135937
chr9:44758699-44759684	chr9	+	44758965	44759685	True	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	230550,-1128235
chr9:44758699-44759684	chr9	+	67680195	67680245	False	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	113994,246515
chr9:44758699-44759684	chr9	-	45111986	45112036	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-121801,-1481256
chr9:44758699-44759684	chr9	+	46271281	46271331	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2640551,416234
chr15:63338057-63338575	chr15	+	63338096	63338592	True	NM_001018006,NM_001018007,NM_001018004,NM_001018005,NM_001018008,NM_000366,NM_001018020,NM_015920	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,-	TPM1,TPM1,TPM1,TPM1,TPM1,TPM1,TPM1,RPS27L	-3317,-3317,-3317,-3317,2043,-3317,-3317,111199
chr1:13489942-13490827	chr1	+	13490005	13490581	True	NM_001045480,NM_001099850	chr1,chr1	+,-	PRAMEF16,PRAMEF18	4672,-12436
chr1:13489942-13490827	chr1	+	13710836	13711412	False	NM_001099850,NM_001099851	chr1,chr1	-,+	PRAMEF18,PRAMEF17	-12431,4675
chr1:13489942-13490827	chr1	-	13021015	13021073	False	NM_001100631,NM_001010889	chr1,chr1	+,-	PRAMEF22,PRAMEF6	14469,-13609
chr1:13489942-13490827	chr1	+	13346166	13346224	False	NM_001013692,NM_001013407	chr1,chr1	-,+	PRAMEF3,PRAMEF5	-14474,13594
chr22:25826897-25828501	chr22	+	25827013	25828327	True	NM_001135772,NR_033733	chr22,chr22	-,+	LRP5L,CRYBB2P1	-49469,15726
chr22:25826897-25828501	chr22	-	23939730	23940216	False	NM_153615,NM_152855	chr22,chr22	+,-	RGL4,IGLL1	92831,-17235
chr5:14871540-14871804	chr5	+	14871699	14871813	True	NM_138348,NM_054027	chr5,chr5	+,-	FAM105B,ANKH	-206967,124
chr6:110650920-110651249	chr6	+	110650921	110651209	True	NM_001123364,NM_015891	chr6,chr6	-,+	C6orf186,CDC40	28316,-149357
chr15:100274513-100275489	chr15	+	100274603	100275462	True	NM_001130928,NM_152449	chr15,chr15	+,-	MEF2A,LYSMD4	-101475,-977
chr2:27009760-27010242	chr2	+	27009776	27009934	True	NM_001029881,NM_001042426,NM_001809	chr2,chr2,chr2	-,+,+	CIB4,CENPA,CENPA	-145565,-944,-945
chr17:36860405-36861143	chr17	+	36860618	36860984	True	NM_001130677,NM_005937	chr17,chr17	-,+	C17orf96,MLLT6	-29431,888
chr1:150244465-150244880	chr1	+	150244582	150244858	True	NM_016022,NM_024579,NM_001077628	chr1,chr1,chr1	-,+,-	APH1A,C1orf54,APH1A	-3050,324,-3050
chr2:68547167-68547653	chr2	+	68547214	68547598	True	NM_015463,NM_002664,NM_001111101	chr2,chr2,chr2	-,+,-	CNRIP1,PLEK,CNRIP1	-31,44723,-31
chr19:4401223-4401535	chr19	+	4401250	4401399	True	NM_001199943,NM_003025,NM_005483,NM_001199944	chr19,chr19,chr19,chr19	-,-,+,-	SH3GL1,SH3GL1,CHAF1A,SH3GL1	-685,-685,1260,-835
chr9:131841338-131841850	chr9	+	131841391	131841847	True	NM_000755,NM_020438,NM_001135917	chr9,chr9,chr9	-,+,+	CRAT,DOLPP1,DOLPP1	31273,1535,1535
chr4:55984810-55985091	chr4	+	55984812	55985103	True	NM_024592,NM_002253	chr4,chr4	+,-	SRD5A3,KDR	227284,6709
chr7:6488600-6489704	chr7	+	6488698	6489485	True	NM_001142936,NM_018890,NM_139179	chr7,chr7,chr7	-,+,-	DAGLB,RAC1,DAGLB	-1055,-74623,-1055
chr7:6488600-6489704	chr7	+	6490149	6490200	False	NM_001142936,NM_018890,NM_139179	chr7,chr7,chr7	-,+,-	DAGLB,RAC1,DAGLB	-2506,-76075,-2506
chr17:9728433-9730279	chr17	+	9728545	9729921	True	NM_001105571,NM_004246	chr17,chr17	-,+	DHRS7C,GLP2R	-33944,130
chr11:94227427-94228209	chr11	+	94227507	94228233	True	NM_017704,NM_005590,NM_005591	chr11,chr11,chr11	+,-,-	ANKRD49,MRE11A,MRE11A	-413,-467,-467
chr16:1728767-1729416	chr16	+	1728887	1729318	True	NM_144570,NM_014714	chr16,chr16	+,-	HN1L,IFT140	-660,-66778
chr8:63155211-63157030	chr8	+	63155247	63156803	True	NM_173688,NM_001164756	chr8,chr8	+,-	NKAIN3,ASPH	4697,-528048
chrX:77395650-77396168	chrX	+	77395739	77396185	True	NM_000291,NM_015975	chrX,chrX	+,-	PGK1,TAF9B	-36124,-560
chr22:43346843-43347250	chr22	+	43346898	43347278	True	NM_001184971,NM_007229,NM_001197	chr22,chr22,chr22	-,-,+	PACSIN2,PACSIN2,BIK	8659,-3851,159478
chr6:136562151-136562936	chr6	+	136562438	136562895	True	NM_001099286,NM_018945,NM_138419	chr6,chr6,chr6	-,+,-	FAM54A,PDE7B,FAM54A	8611,-389667,8611
chr17:74098277-74099365	chr17	+	74098276	74099172	True	NM_001013839,NM_015219,NM_001145297,NM_180990,NR_028133,NM_001145298,NM_001145299	chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,+,-,-,-	EXOC7,EXOC7,EXOC7,ZACN,EXOC7,EXOC7,EXOC7	746,746,746,-23065,530,746,746
chr4:9609279-9609957	chr4	+	9609401	9609981	True	NR_031688,NM_001040448	chr4,chr4	-,+	MIR548I2,DEFB131	-51464,-163192
chr11:115376247-115376707	chr11	+	115376317	115376731	True	NM_001098517,NM_182495,NM_014333	chr11,chr11,chr11	-,+,-	CADM1,FAM55B,CADM1	-1076,-827177,-1076
chr4:4248973-4249765	chr4	+	4249034	4249755	True	NM_032927,NM_145291	chr4,chr4	-,+	TMEM128,ZBTB49	229,42168
chr3:75708160-75708860	chr3	+	75708451	75708579	True	NR_037925,NM_001124759,NM_001128223	chr3,chr3,chr3	+,+,-	FLJ20518,FRG2C,ZNF717	4901,4907,125730
chr15:50716108-50716335	chr15	+	50716171	50716314	True	NM_005154,NM_181427,NM_001128611,NM_001128610	chr15,chr15,chr15,chr15	+,-,+,+	USP8,GABPB1,USP8,USP8	264,-68566,264,264
chr13:30163787-30165101	chr13	+	30164064	30164994	True	NM_015233,NM_003045	chr13,chr13	+,-	MTUS2,SLC7A1	-161351,4881
chr3:32989142-32990787	chr3	+	32989203	32990686	True	NM_001039770,NM_005508	chr3,chr3	-,+	TMPPE,CCR4	147658,2379
chr19:53664291-53665348	chr19	+	53664400	53665121	True	NM_032584,NM_173856,NM_001172674,NM_001172675	chr19,chr19,chr19,chr19	-,+,-,-	ZNF347,VN1R2,ZNF347,ZNF347	-2078,96423,-2087,-2078
chr18:29172862-29174546	chr18	+	29173087	29174515	True	NM_004775,NM_000371	chr18,chr18	-,+	B4GALT6,TTR	90221,-1408
chr9:139971020-139971278	chr9	+	139971131	139971321	True	NM_207309,NM_178448,NR_027447	chr9,chr9,chr9	+,-,-	UAP1L1,C9orf140,LOC100289341	631,-6103,9998
chr1:227749525-227749814	chr1	+	227749564	227749858	True	NR_036753,NR_033184,NM_178549	chr1,chr1,chr1	-,+,+	ZNF847P,ZNF678,ZNF678	135600,1361,1361
chr7:158381356-158381778	chr7	+	158381429	158381783	True	NM_130843,NM_130842,NM_018051,NM_002847	chr7,chr7,chr7,chr7	-,-,+,-	PTPRN2,PTPRN2,WDR60,PTPRN2	-947,-947,267485,-947
chr1:3527389-3527652	chr1	+	3527400	3527474	True	NM_001409,NM_182752	chr1,chr1	-,+	MEGF6,TPRG1L	635,14081
chr20:48791577-48792998	chr20	+	48792448	48793022	True	NR_027889,NM_005194	chr20,chr20	-,+	TMEM189,CEBPB	-22113,14353
chr4:37593684-37595455	chr4	+	37594006	37595440	True	NM_018302,NM_001085399	chr4,chr4	+,-	C4orf19,RELL1	-8202,92611
chr11:118303035-118303703	chr11	+	118303072	118303480	True	NM_001197104,NM_005933,NM_001040651	chr11,chr11,chr11	+,+,-	MLL,MLL,CD3D	3724,3724,-89613
chr20:30641295-30641672	chr20	+	30641461	30641550	True	NM_030815,NM_002110,NM_001172129,NM_001172131,NM_001172130,NM_001172133,NM_001172132	chr20,chr20,chr20,chr20,chr20,chr20,chr20	-,+,+,+,+,+,+	PDRG1,HCK,HCK,HCK,HCK,HCK,HCK	-101578,-1531,-1531,-1531,-1531,-1531,-1531
chr17:3112655-3113990	chr17	+	3113237	3113883	True	NM_002551,NM_014565	chr17,chr17	-,+	OR3A2,OR1A1	68435,5031
chr2:27664585-27664949	chr2	+	27664586	27664928	True	NM_177983,NM_173853,NM_001168364	chr2,chr2,chr2	-,+,+	PPM1G,KRTCAP3,KRTCAP3	-32090,304,304
chr19:8008958-8009292	chr19	+	8009007	8009307	True	NM_006351,NR_030717	chr19,chr19	-,+	TIMM44,SNAPC2	-299,-23191
chr6:143832931-143833204	chr6	+	143832932	143833244	True	NM_032020,NM_003630	chr6,chr6	-,+	FUCA2,PEX3	-22,-61065
chr19:11850156-11850517	chr19	+	11850217	11850445	True	NM_152355,NM_001080493	chr19,chr19	+,-	ZNF441,ZNF823	27369,-457
chrX:18237880-18238242	chrX	+	18238150	18238242	True	NM_153346,NM_001184767,NM_003159	chrX,chrX,chrX	-,-,+	BEND2,BEND2,CDKL5	832,832,205482
chr21:37947446-37948757	chr21	+	37947806	37948781	True	NM_001146077,NM_009586	chr21,chr21	-,+	CLDN14,SIM2	137,123209
chr16:16327493-16328558	chr16	+	16327569	16328507	True	NM_001079528,NM_001004067	chr16,chr16	-,+	ABCC6,NOMO3	-10241,-1231
chr16:16327493-16328558	chr16	+	14928753	14929691	False	NR_023387,NM_014287	chr16,chr16	-,+	ABCC6P2,NOMO1	-10194,-1161
chr16:16327493-16328558	chr16	-	18571369	18572305	False	NM_001004060,NM_173614,NR_003569	chr16,chr16,chr16	-,-,+	NOMO2,NOMO2,ABCC6P1	1179,1179,10264
chr6:167705748-167706891	chr6	+	167705821	167706939	True	NM_004610,NM_018974,NM_001143947	chr6,chr6,chr6	-,+,+	TCP10,UNC93A,UNC93A	91109,-1078,-1078
chr15:77226643-77227381	chr15	+	77226830	77227343	True	NM_020843,NM_002902	chr15,chr15	-,+	SCAPER,RCN2	-50613,-2919
chr11:122705362-122705824	chr11	+	122705362	122705876	True	NM_019604,NM_001098169	chr11,chr11	+,-	CRTAM,BSX	3378,146556
chr19:52265631-52267101	chr19	+	52266006	52266808	True	NM_002029,NM_001462,NM_001005738	chr19,chr19,chr19	-,+,+	FPR1,FPR2,FPR2	-10856,-17,-1604
chr16:27899636-27900097	chr16	+	27899636	27899710	True	NM_015202,NM_144675	chr16,chr16	+,-	KIAA0556,GSG1L	-338219,-158
chr2:130875806-130876240	chr2	+	130875858	130875919	True	NM_001099771,NR_033903	chr2,chr2	-,+	POTEF,LOC285103	10927,11276
chr2:130875806-130876240	chr2	-	131978145	131978206	False	NM_001009993,NM_001083538	chr2,chr2	-,+	FAM168B,POTEE	-127141,-2273
chrX:37545579-37546046	chrX	+	37545607	37546095	True	NM_021083,NM_006520	chrX,chrX	+,-	XK,DYNLT3	-525,160844
chr17:19092118-19092631	chr17	+	19092338	19092658	True	NM_006613,NM_001102664	chr17,chr17	-,+	GRAP,EPN2	-142002,48031
chr17:19092118-19092631	chr17	-	19014778	19014954	False	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	15827,-64442
chr17:19092118-19092631	chr17	+	18966237	18966557	False	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	64224,-15901
chrX:115239728-115240090	chrX	+	115239727	115239798	True	NM_000686,NM_001017978	chrX,chrX	+,-	AGTR2,CXorf61	62159,354394
chr12:104359950-104361325	chr12	+	104360156	104361202	True	NM_003211,NM_001135570	chr12,chr12	+,-	TDG,C12orf73	-614,-9163
chr15:27218391-27219806	chr15	+	27218594	27219575	True	NM_021912,NM_033223	chr15,chr15	-,+	GABRB3,GABRG3	-199659,-2230
chr12:14823556-14824230	chr12	+	14824071	14824156	True	NM_177925,NM_004963	chr12,chr12	+,-	H2AFJ,GUCY2C	103113,25420
chr3:57321368-57322471	chr3	+	57321458	57322503	True	NM_012096,NM_130387,NM_001142733	chr3,chr3,chr3	+,-,-	APPL1,ASB14,ASB14	-59744,-8478,4257
chrX:118924191-118925262	chrX	+	118924374	118925281	True	NM_001000,NR_002584,NM_001105576	chrX,chrX,chrX	-,-,+	RPL39,SNORA69,ANKRD58	375,-2927,-31849
chr7:36429786-36430028	chr7	+	36429813	36429921	True	NM_018685,NM_001100425	chr7,chr7	+,-	ANLN,KIAA0895	-433,-79
chr15:29863340-29863962	chr15	+	29863694	29864007	True	NM_015307,NR_026859	chr15,chr15	-,+	FAM189A1,FAM7A3	-767,531927
chrX:140271633-140272377	chrX	+	140271661	140272312	True	NM_145664,NM_012317	chrX,chrX	+,-	SPANXB2,LDOC1	-174951,-351
chr2:232649856-232650897	chr2	+	232649889	232650831	True	NM_022730,NM_002601	chr2,chr2	+,-	COPS7B,PDE6D	330,-3915
chr2:27487766-27488013	chr2	+	27487831	27488041	True	NM_173650,NM_003459	chr2,chr2	+,-	DNAJC5G,SLC30A3	10247,-1871
chrX:129116003-129116251	chrX	+	129116020	129116261	True	NM_021946,NM_001421	chrX,chrX	+,-	BCORL1,ELF4	22902,128264
chr4:132299006-132300490	chr4	+	132299107	132300357	True	NM_144643,NM_020815	chr4,chr4	-,+	SCLT1,PCDH10	-2284343,1770112
chr4:184017347-184017623	chr4	+	184017439	184017641	True	NR_024008,NM_024949	chr4,chr4	-,+	C4orf38,WWC2	2761,2821
chr22:25338254-25339339	chr22	+	25338347	25339355	True	NM_001145206,NM_001001663	chr22,chr22	+,-	KIAA1671,TMEM211	84585,-3033
chr3:186479319-186479676	chr3	+	186479343	186479565	True	NM_001967,NM_002916	chr3,chr3	+,-	EIF4A2,RFC4	21795,44775
chr7:150652127-150652443	chr7	+	150652127	150652333	True	NM_172057,NM_000603,NM_001204798	chr7,chr7,chr7	-,+,-	KCNH2,NOS3,KCNH2	634,35810,634
chr6:150263015-150263266	chr6	+	150263047	150263219	True	NM_025217,NM_001001788	chr6,chr6	+,-	ULBP2,RAET1G	32,-18833
chr16:15248831-15249439	chr16	+	15248865	15249445	True	NM_015027,NR_037466	chr16,chr16	+,-	PDXDC1,MIR3180-4	-180083,-6
chr16:15248831-15249439	chr16	+	2186278	2186524	False	NM_001009944,NM_000296,NR_037467,NM_014353	chr16,chr16,chr16,chr16	-,-,-,+	PKD1,PKD1,MIR3180-5,RAB26	-379,-379,-148,12126
chr16:15248831-15249439	chr16	+	18496292	18496688	False	NR_003569,NR_036142,NR_036143,NR_036140,NR_036141,NR_036144,NR_036145	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,-,-,-,-	ABCC6P1,MIR3180-2,MIR3179-2,MIR3179-1,MIR3180-1,MIR3180-3,MIR3179-3	85881,-168,9196,9196,-164,-164,9196
chr16:15248831-15249439	chr16	-	15004516	15004912	False	NR_023387,NR_036142,NR_036143,NR_036140,NR_036141,NR_036144,NR_036145	chr16,chr16,chr16,chr16,chr16,chr16,chr16	-,+,+,+,+,+,+	ABCC6P2,MIR3180-2,MIR3179-2,MIR3179-1,MIR3180-1,MIR3180-3,MIR3179-3	-85957,168,-9202,-9202,164,164,-9202
chr16:15248831-15249439	chr16	-	16403171	16403567	False	NR_036447,NR_036142,NR_036143,NR_036140,NR_036141,NM_001079528,NR_036144,NR_036145	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,-,+,+	PKD1P1,MIR3180-2,MIR3179-2,MIR3179-1,MIR3180-1,ABCC6,MIR3180-3,MIR3179-3	7898,168,-9206,-9206,164,-85843,164,-9206
chrX:154213430-154214723	chrX	+	154213742	154214548	True	NM_023934,NM_000132	chrX,chrX	+,-	FUNDC2,F8	40515,36508
chr9:35095658-35096222	chr9	+	35096041	35096171	True	NM_032634,NM_203299,NM_152850,NM_013442,NM_001201484	chr9,chr9,chr9,chr9,chr9	-,+,-,-,-	PIGO,C9orf131,PIGO,STOML2,PIGO	425,-53869,477,7033,425
chr2:30668925-30669987	chr2	+	30668950	30669985	True	NM_182551,NM_001002257,NM_144575	chr2,chr2,chr2	+,+,-	LCLAT1,LCLAT1,CAPN13	137,151,360376
chr8:144777859-144778613	chr8	+	144777866	144778570	True	NR_015445,NM_001162914	chr8,chr8	+,-	BREA2,LOC100130274	714,11759
chr19:50639256-50639925	chr19	+	50639726	50639796	True	NR_024223,NR_024224,NR_024243,NR_024226,NR_024227,NR_024228,NR_024229,NM_001145809,NR_024215,NR_024214,NR_024231,NR_024230,NR_024242,NR_024225	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,+,-,-,-,-,-,-	SNAR-A5,SNAR-A7,SNAR-D,SNAR-A9,SNAR-A6,SNAR-A8,SNAR-A10,MYH14,SNAR-A4,SNAR-A3,SNAR-B1,SNAR-B2,SNAR-A14,SNAR-A11	-7947,-7947,3831,-7947,-7947,-7947,-7947,67088,-7947,-7947,-2605,-2605,-7947,-7947
chr5:134915083-134916639	chr5	+	134915225	134916637	True	NM_004887,NM_145282	chr5,chr5	-,+	CXCL14,SLC25A48	-256,253727
chr5:134870475-134870742	chr5	+	134870489	134870723	True	NM_145282,NM_006161	chr5,chr5	+,-	SLC25A48,NEUROG1	299641,966
chr6:86160327-86160701	chr6	+	86160341	86160652	True	NM_001204813,NM_002526,NM_020468	chr6,chr6,chr6	+,+,-	NT5E,NT5E,SNX14	-1090,-1090,143028
chr4:187070811-187071110	chr4	+	187070831	187071157	True	NM_001006655,NM_015398,NM_021069	chr4,chr4,chr4	+,+,-	FAM149A,FAM149A,SORBS2	-565,-4897,-192961
chr11:59521340-59521682	chr11	+	59521549	59521719	True	NM_004177,NM_001005324,NM_001178040	chr11,chr11,chr11	+,-,+	STX3,OR10V1,STX3	812,-40231,812
chr5:141347963-141348316	chr5	+	141348067	141348295	True	NM_183399,NM_183398,NM_001201365,NM_016580,NM_183401,NM_183400,NM_004290	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,-,+,+,+	RNF14,RNF14,RNF14,PCDH12,RNF14,RNF14,RNF14	-1716,155,-1716,-9440,416,155,155
chr12:7811610-7812001	chr12	+	7811987	7812049	True	NM_001644,NM_199286	chr12,chr12	-,+	APOBEC1,DPPA3	6503,52039
chr7:48961533-48962374	chr7	+	48961598	48962348	True	NR_003595,NM_152782	chr7,chr7	+,-	CDC14C,SUN3	1808,-892882
chr7:48961533-48962374	chr7	-	48889506	48890256	False	NR_003595,NM_152782	chr7,chr7	+,-	CDC14C,SUN3	73900,-820790
chr17:56235294-56235879	chr17	+	56235310	56235913	True	NR_002307,NM_017777,NM_012374	chr17,chr17,chr17	+,-,+	MSX2P1,MKS1,OR4D1	-1041,60803,-2846
chr13:21534507-21535420	chr13	+	21534687	21535331	True	NM_022459,NM_005870	chr13,chr13	-,+	XPO4,SAP18	-57774,179321
chr2:166780045-166781741	chr2	+	166780697	166781781	True	NM_024969,NM_024753	chr2,chr2	+,-	CSRNP3,TTC21B	-351909,28620
chr3:29322090-29322509	chr3	+	29322192	29322400	True	NM_014483,NM_001003793,NM_001003792,NM_001177712,NM_001134433,NM_001177711	chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,-,+	RBMS3,RBMS3,RBMS3,RBMS3,AZI2,RBMS3	402,402,402,402,-931574,402
chr8:99130382-99130812	chr8	+	99130453	99130542	True	NM_015029,NM_001145861,NM_001145860,NM_005836	chr8,chr8,chr8,chr8	+,+,+,-	POP1,POP1,POP1,HRSP12	-437,-984,-984,-1035
chr2:163088562-163089212	chr2	+	163088601	163089218	True	NM_004460,NM_012198	chr2,chr2	-,+	FAP,GCA	10886,111364
chr1:201124300-201125668	chr1	+	201124626	201125568	True	NM_001164586,NM_016456	chr1,chr1	+,-	IGFN1,TMEM9	34384,-994
chr1:11906185-11906467	chr1	+	11906198	11906352	True	NR_037806,NM_006172	chr1,chr1	+,-	NPPA-AS1,NPPA	-5874,1550
chr1:27961015-27961592	chr1	+	27961364	27961428	True	NM_001042747,NM_001042729,NM_005248,NM_001143912	chr1,chr1,chr1,chr1	-,-,-,+	FGR,FGR,FGR,FAM76A	-8613,-8258,349,91061
chr7:104901716-104903624	chr7	+	104902205	104903149	True	NM_182931,NM_182691	chr7,chr7	+,-	MLL5,SRPK2	-247619,6380
chr5:148962858-148964478	chr5	+	148963062	148964070	True	NM_001892,NM_001001669	chr5,chr5	-,+	CSNK1A1,ARHGEF37	-32055,-1978
chr17:43126604-43127499	chr17	+	43126647	43127070	True	NM_021079,NM_001128631	chr17,chr17	+,-	NMT1,DCAKD	11609,1966
chr1:160083328-160083948	chr1	+	160083413	160083945	True	NM_052868,NM_000702	chr1,chr1	-,+	IGSF8,ATP1A2	-15005,1574
chr17:26882954-26883674	chr17	+	26883008	26883670	True	NM_054035,NM_005148,NM_003593	chr17,chr17,chr17	-,-,+	UNC119,UNC119,FOXN1	-3362,-3362,-32105
chr1:39957863-39958072	chr1	+	39957886	39958000	True	NR_003929,NM_181809	chr1,chr1	-,+	PPIEL,BMP8A	67420,-619
chr13:90013875-90015434	chr13	+	90014001	90015205	True	NR_030754,NR_027039	chr13,chr13	+,-	MIR622,LOC144776	868230,1563696
chr16:83936861-83937269	chr16	+	83936867	83937259	True	NM_001080442,NM_012213	chr16,chr16	-,+	SLC38A8,MLYCD	138560,-4188
chr2:25562648-25563099	chr2	+	25562664	25562890	True	NM_014971,NM_175630,NM_175629,NM_022552	chr2,chr2,chr2,chr2	+,-,-,-	EFR3B,DNMT3A,DNMT3A,DNMT3A	-297742,2619,2619,1934
chrY:14482965-14483372	chrY	+	14483022	14483269	True	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	291028,50170
chr3:29320865-29322090	chr3	+	29320925	29322082	True	NM_014483,NM_001003793,NM_001003792,NM_001177712,NM_001134433,NM_001177711	chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,-,+	RBMS3,RBMS3,RBMS3,RBMS3,AZI2,RBMS3	720,720,720,720,-930307,720
chr2:234614617-234615780	chr2	+	234614935	234615804	True	NM_001001394,NM_019078	chr2,chr2	-,+	DNAJB3,UGT1A5	36908,5833
chr2:33063836-33065356	chr2	+	33064289	33065277	True	NM_021209,NR_027098	chr2,chr2	-,+	NLRC4,LOC285045	-573477,-13830
chr19:13215540-13215927	chr19	+	13215586	13215762	True	NM_005583,NM_052876	chr19,chr19	-,+	LYL1,NACC1	-1612,13346
chr7:128309691-128310117	chr7	+	128309885	128309945	True	NM_001708,NM_001012454,NM_001128926	chr7,chr7,chr7	-,+,+	OPN1SW,FAM71F2,FAM71F2	105949,2400,2400
chr17:31620456-31621247	chr17	+	31620507	31621283	True	NM_183377,NM_173847	chr17,chr17	-,+	ACCN1,SPACA3	-501,-301677
chr2:179340250-179341936	chr2	+	179340277	179341882	True	NM_019091,NM_001135212,NM_181342	chr2,chr2,chr2	+,-,-	PLEKHA3,FKBP7,FKBP7	3316,1533,1533
chr1:86943582-86943831	chr1	+	86943596	86943832	True	NM_001285,NM_020729	chr1,chr1	+,-	CLCA1,ODF2L	-9121,-81571
chr9:12775810-12776185	chr9	+	12775958	12776234	True	NM_203403,NM_003829	chr9,chr9	+,-	C9orf150,MPDZ	-997,474181
chr5:1444974-1445185	chr5	+	1445048	1445228	True	NM_182632,NM_001044	chr5,chr5	+,-	SLC6A18,SLC6A3	-219629,365
chr2:56412150-56412359	chr2	+	56412280	56412354	True	NM_001080433,NR_030623	chr2,chr2	+,-	CCDC85A,MIR216B	-1073,-184350
chr13:51710101-51710728	chr13	+	51710168	51710640	True	NR_003923,NM_145019	chr13,chr13	-,+	GUCY1B2,FAM124A	-69875,85866
chr11:72982773-72984299	chr11	+	72982876	72984222	True	NM_014824,NM_176797,NM_176796,NM_004154,NM_176798	chr11,chr11,chr11,chr11,chr11	-,+,+,+,+	FCHSD2,P2RY6,P2RY6,P2RY6,P2RY6	-129733,-7357,-7357,44,-1988
chr9:133320967-133321945	chr9	+	133321179	133321898	True	NM_000050,NR_027440,NM_054012	chr9,chr9,chr9	+,-,+	ASS1,LOC100272217,ASS1	-1136,133033,-1136
chr10:22289775-22291436	chr10	+	22289875	22291301	True	NM_012071,NM_022365	chr10,chr10	+,-	COMMD3,DNAJC1	314010,1399
chr16:67905612-67905962	chr16	+	67905719	67905963	True	NM_014329,NM_025082	chr16,chr16	+,-	EDC4,CENPT	1035,-24358
chr2:43057679-43058773	chr2	+	43058016	43058623	True	NM_020744,NM_012205	chr2,chr2	+,-	MTA3,HAAO	-262405,-38265
chr1:1344033-1344246	chr1	+	1344032	1344142	True	NM_001039577,NM_017971,NR_015434,NM_030937	chr1,chr1,chr1,chr1	-,-,+,-	CCNL2,MRPL20,LOC148413,CCNL2	-9314,-1339,-9173,-9314
chrX:150570448-150571454	chrX	+	150570989	150571421	True	NM_001017980,NM_134446	chrX,chrX	+,-	VMA21,CD99L2	-5386,-503700
chr7:149413500-149413814	chr7	+	149413539	149413837	True	NM_207336,NM_032534	chr7,chr7	-,+	ZNF467,KRBA1	56508,-1442
chr19:16248157-16249358	chr19	+	16248670	16249250	True	NM_032855,NM_054113	chr19,chr19	+,-	HSH2D,CIB3	-3883,35086
chrX:140941163-140942970	chrX	+	140941650	140942992	True	NM_138702,NM_145665	chrX,chrX	+,-	MAGEC3,SPANXE	-15604,-154995
chr14:19551902-19552336	chr22	-	16288980	16289046	False	NR_001591,NM_001136213	chr22,chr22	+,-	psiTPTE22,POTEH	793754,-1043
chr14:19551902-19552336	chr14	+	19551956	19552351	True	NM_001145442,NR_027480,NM_001005356	chr14,chr14,chr14	-,+,+	POTEM,POTEG,POTEG	467971,1013,1013
chr14:19551902-19552336	chr14	-	20021276	20021669	False	NM_001145442,NM_172194	chr14,chr14	-,+	POTEM,OR4Q3	-1004,193917
chr22:45407461-45407899	chr22	+	45407482	45407800	True	NM_007172,NM_138415,NM_001135862	chr22,chr22,chr22	+,-,-	NUP50,PHF21B,PHF21B	151925,-1901,-1673
chr2:191221325-191223102	chr2	+	191221330	191222780	True	NM_198047,NM_002194	chr2,chr2	-,+	HIBCH,INPP1	-36559,-13185
chr7:94150123-94152060	chr7	+	94150707	94151962	True	NM_001099400,NM_022900	chr7,chr7	-,+	SGCE,CASD1	133612,-11598
chr19:58837650-58838256	chr19	+	58837727	58838305	True	NM_181846,NM_130786	chr19,chr19	+,-	ZSCAN22,A1BG	79,26610
chr17:39165285-39165629	chr17	+	39165343	39165679	True	NM_031959,NM_031958,NM_033061	chr17,chr17,chr17	-,-,+	KRTAP3-2,KRTAP3-1,KRTAP4-7	-9205,23,74779
chr5:140855930-140856130	chr5	+	140855935	140856109	True	NM_002588,NM_018928,NM_001079812,NM_032406,NM_032402,NM_032403	chr5,chr5,chr5,chr5,chr5,chr5	+,+,-,+,+,+	PCDHGC3,PCDHGC4,DIAPH1,PCDHGC4,PCDHGC3,PCDHGC3	-417,8631,142563,8631,-417,-417
chr19:16005649-16006334	chr19	+	16005654	16006348	True	NM_001004465,NM_001082	chr19,chr19	+,-	OR10H4,CYP4F2	53469,2586
chr6:132816126-132816343	chr6	+	132816126	132816388	True	NM_003569,NM_175057	chr6,chr6	-,+	STX7,TAAR9	18009,43038
chr22:18112699-18113136	chr22	+	18112998	18113060	True	NM_015367,NM_001039366,NM_001039367,NM_001696	chr22,chr22,chr22,chr22	+,-,-,-	BCL2L13,ATP6V1E1,ATP6V1E1,ATP6V1E1	8424,-1410,-1410,-1410
chr19:2310540-2310878	chr19	+	2310717	2310783	True	NM_001101391,NM_001077238	chr19,chr19	-,+	LINGO3,SPPL2B	-2561,17845
chr12:69348876-69350191	chr12	+	69349004	69350003	True	NM_001874,NM_002392	chr12,chr12	-,+	CPM,MDM2	7067,-147084
chr20:36319882-36320562	chr20	+	36320081	36320193	True	NM_006698,NM_030877	chr20,chr20	-,+	BLCAP,CTNNBL1	-163748,2240
chr18:28737495-28739055	chr18	+	28737575	28738880	True	NM_004948,NM_001942,NM_024421	chr18,chr18,chr18	-,+,-	DSC1,DSG1,DSC1	3996,159171,3996
chr12:56615291-56615623	chr12	+	56615367	56615609	True	NM_173596,NM_194359,NM_005785,NM_194358,NM_001135195,NM_024068	chr12,chr12,chr12,chr12,chr12,chr12	+,-,-,-,+,+	SLC39A5,RNF41,RNF41,RNF41,SLC39A5,OBFC2B	8210,176,145,145,8891,2515
chr19:17379397-17379722	chr19	+	17379582	17379710	True	NM_001033549,NM_031941,NM_014173	chr19,chr19,chr19	+,-,+	BABAM1,USHBP1,BABAM1	-1401,-4038,-1401
chr11:57003743-57003966	chr11	+	57003753	57003957	True	NM_001005210,NM_005161,NR_027991	chr11,chr11,chr11	+,-,-	LRRC55,APLNR,APLNR	-54583,1020,1020
chr6:166076625-166076857	chr6	+	166076629	166076859	True	NM_001130690,NM_006661,NR_027284	chr6,chr6,chr6	-,-,+	PDE10A,PDE10A,LOC441177	-1045,-1045,324179
chr14:21501133-21502300	chr14	+	21501377	21502349	True	NM_001012264,NM_201536,NM_201537,NM_201535,NM_173846,NM_201541,NM_016250,NM_201540,NM_032572,NM_201538,NM_201539	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	-,-,-,-,+,-,-,-,+,-,-	RNASE13,NDRG2,NDRG2,NDRG2,TPPP2,NDRG2,NDRG2,NDRG2,RNASE7,NDRG2,NDRG2	645,-7442,-7442,-7442,-3084,-8113,-7442,-8113,8035,-8113,-8113
chr1:24831919-24833422	chr1	+	24832176	24833454	True	NM_001199012,NM_013441	chr1,chr1	-,+	C1orf201,RCAN3	-90589,-2841
chr14:68140484-68141006	chr14	+	68140484	68140928	True	NM_006370,NM_152443	chr14,chr14	-,+	VTI1B,RDH12	724,27674
chr11:9483116-9484096	chr11	+	9483116	9483804	True	NM_003442,NR_036539	chr11,chr11	+,-	ZNF143,LOC644656	-655,-871
chr11:93063957-93065064	chr11	+	93064134	93064869	True	NM_152313,NM_181645	chr11,chr11	-,+	SLC36A4,CCDC67	-133039,-302
chr15:76136917-76138029	chr15	+	76137029	76138003	True	NM_001145335,NM_173469,NR_036198	chr15,chr15,chr15	+,+,-	UBE2Q2,UBE2Q2,MIR4313	-706,-1469,-82373
chr17:72200397-72201879	chr17	+	72200515	72201864	True	NM_000999,NR_026914,NM_032646,NM_001035258	chr17,chr17,chr17,chr17	+,-,+,+	RPL38,MGC16275,TTYH2,RPL38	-771,7649,7831,-771
chr5:140712457-140713998	chr5	+	140712721	140713836	True	NM_031993,NM_032011,NM_032009,NM_005642,NM_018915,NM_018916,NM_018912	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,-,+,+,+	PCDHGA1,PCDHGA3,PCDHGA2,TAF7,PCDHGA2,PCDHGA3,PCDHGA1	-2528,9764,4517,-12370,4517,9764,-2528
chr5:134097091-134097888	chr5	+	134097123	134097592	True	NM_014829,NM_016103	chr5,chr5	+,-	DDX46,SAR1B	-2719,-128590
chr1:27671062-27671392	chr1	+	27671354	27671424	True	NM_032872,NM_001193308,NM_004672	chr1,chr1,chr1	+,+,-	SYTL1,SYTL1,MAP3K6	-2922,-2922,21963
chr2:106046929-106048368	chr2	+	106047191	106048251	True	NM_024093,NM_201557	chr2,chr2	+,-	C2orf49,FHL2	-93230,7037
chr2:11051477-11051709	chr2	+	11051477	11051755	True	NM_005742,NM_002236	chr2,chr2	-,+	PDIA6,KCNF1	-98517,307
chr4:77819597-77819798	chr4	+	77819675	77819764	True	NM_018243,NM_001029870	chr4,chr4	+,-	SEPT11,ANKRD56	51130,-673
chr5:147472107-147473664	chr5	+	147472141	147473213	True	NM_006846,NM_206966	chr5,chr5	+,-	SPINK5,C5orf46	-28667,-186040
chr10:94448264-94448754	chr10	+	94448291	94448741	True	NM_002729,NM_004969	chr10,chr10	+,-	HHEX,IDE	939,-114439
chr16:70324292-70325568	chr16	+	70324709	70325387	True	NM_001014451,NM_001014449,NM_007242,NM_001605	chr16,chr16,chr16,chr16	+,+,+,-	DDX19B,DDX19B,DDX19B,AARS	7684,7684,7684,-1297
chr21:14988860-14989102	chr18	-	14536622	14536721	False	NM_001137671,NR_026756	chr18,chr18	-,+	POTEC,LOC284233	6943,-199262
chr21:14988860-14989102	chr15	-	21065195	21065258	False	NM_207355,NR_027411	chr15,chr15	-,+	POTEB,GOLGA8C	6777,-297579
chr21:14988860-14989102	chr15	-	22076352	22076415	False	NR_015416,NM_207355	chr15,chr15	+,-	LOC727924,POTEB	201616,6780
chr21:14988860-14989102	chr21	+	14988873	14989044	True	NR_036164,NM_174981	chr21,chr21	-,+	MIR3156-3,POTED	-210092,-6434
chr19:44172405-44173129	chr19	+	44172405	44173048	True	NM_001005376,NM_001005377,NM_019612,NM_002659	chr19,chr19,chr19,chr19	-,-,+,-	PLAUR,PLAUR,IRGC,PLAUR	1500,1500,47165,1500
chr3:39505397-39506668	chr3	+	39505401	39506396	True	NM_001171174,NR_003090,NM_182935	chr3,chr3,chr3	-,+,+	CX3CR1,MOBP,MOBP	-182175,2673,2673
chr12:76652466-76653567	chr12	+	76652624	76653603	True	NM_015336,NM_024685	chr12,chr12	+,-	ZDHHC17,BBS10	504250,88670
chr14:23879288-23879876	chr14	+	23879407	23879897	True	NR_030624,NM_002471,NM_138460	chr14,chr14,chr14	-,-,+	MIR208B,MYH6,CMTM5	7425,-1921,-33441
chr3:58477094-58477737	chr3	+	58477228	58477640	True	NM_153331,NM_003500,NM_001128214	chr3,chr3,chr3	+,-,+	KCTD6,ACOX2,KCTD6	6451,45339,182
chr19:56135878-56136080	chr19	+	56135881	56136127	True	NM_001195605,NM_203374	chr19,chr19	+,-	ZNF865,ZNF784	-10973,60
chr1:153644580-153645110	chr1	+	153644667	153645035	True	NM_000906,NM_004515	chr1,chr1	+,-	NPR1,ILF2	6128,-1188
chr13:33859646-33859937	chr13	+	33859649	33859807	True	NM_004795,NM_178006	chr13,chr13	+,-	KL,STARD13	-269129,144
chr6:42857032-42858168	chr6	+	42857628	42858150	True	NM_001008739,NM_198486	chr6,chr6	-,+	C6orf226,RPL7L1	454,-10021
chr5:10615234-10615956	chr5	+	10615253	10615995	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-50869,145442
chr3:156585391-156585919	chr3	+	156585561	156585955	True	NM_001193283,NR_003284	chr3,chr3	+,-	LEKR1,PA2G4P4	-41465,-55751
chr2:24270279-24270896	chr2	+	24270383	24270881	True	NM_004116,NM_025203,NM_054033,NM_001142319	chr2,chr2,chr2,chr2	+,-,+,-	FKBP1B,C2orf44,FKBP1B,C2orf44	1702,-87,1702,-87
chr12:58335152-58335496	chr12	+	58335153	58335505	True	NM_005730,NM_033276	chr12,chr12	-,+	CTDSP2,XRCC6BP1	-94406,13
chr11:65655424-65655897	chr11	+	65655475	65655859	True	NM_198897,NM_004214,NM_006848,NM_001335	chr11,chr11,chr11,chr11	-,-,+,+	FIBP,FIBP,CCDC85B,CTSW	201,201,2015,-8242
chr19:1491732-1491972	chr19	+	1491872	1491948	True	NM_138393,NM_017573	chr19,chr19	+,-	REEP6,PCSK4	-758,-1465
chr2:234460048-234460385	chr2	+	234460048	234460389	True	NM_019076,NM_018218	chr2,chr2	+,-	UGT1A8,USP40	65901,13901
chr17:62940333-62941678	chr17	+	62940621	62941643	True	NM_199340,NM_001165933	chr17,chr17	-,+	LRRC37A3,RGS9	-25718,191812
chr4:87269434-87270033	chr4	+	87269482	87269982	True	NM_006264,NM_138980	chr4,chr4	+,-	PTPN13,MAPK10	245485,11453
chr7:32982815-32983806	chr7	+	32982976	32983540	True	NM_007270,NR_003500	chr7,chr7	+,-	FKBP9,RP9P	13464,-194
chr4:100445295-100446873	chr4	+	100445426	100446678	True	NM_152292,NM_032149	chr4,chr4	-,+	RG9MTD2,C4orf17	38197,-13327
chr11:57509413-57511374	chr11	+	57509460	57511311	True	NM_001145101,NM_170746	chr11,chr11	-,+	BTBD18,C11orf31	7992,-789
chr21:46056149-46056496	chr21	+	46056172	46056489	True	NM_198698,NM_198690,NM_181688,NM_198692	chr21,chr21,chr21,chr21	-,+,+,+	KRTAP12-4,KRTAP10-9,KRTAP10-10,KRTAP10-11	18138,-9184,783,9841
chr18:12420285-12420894	chr18	+	12420331	12420925	True	NM_006796,NM_006553	chr18,chr18	-,+	AFG3L2,SLMO1	-43056,-12487
chr9:27574174-27576030	chr9	+	27574204	27575989	True	NM_018325,NM_020124,NM_145005	chr9,chr9,chr9	-,+,-	C9orf72,IFNK,C9orf72	-723,-49956,-362
chr7:73275909-73276910	chr7	+	73276068	73276922	True	NM_152559,NM_182504	chr7,chr7	-,+	WBSCR27,WBSCR28	-19213,-630
chrX:283578-283901	chrY	+	233725	233793	False	NM_012227,NR_027232,NR_027231	chrY,chrY,chrY	-,+,+	GTPBP6,NCRNA00107,NCRNA00107	-52838,-2391,-2391
chrX:283578-283901	chrX	+	283725	283793	True	NM_012227,NR_027232,NR_027231	chrX,chrX,chrX	-,+,+	GTPBP6,NCRNA00107,NCRNA00107	-52838,-2391,-2391
chr16:56663185-56665105	chr16	+	56663339	56664673	True	NM_005946,NM_175617,NR_036677,NM_176870,NM_005950	chr16,chr16,chr16,chr16,chr16	+,+,+,+,-	MT1A,MT1E,MT1JP,MT1M,MT1G	7904,-3806,4977,1860,37354
chr11:59860001-59860580	chr11	+	59860117	59860625	True	NM_152851,NM_000139	chr11,chr11	-,+	MS4A6A,MS4A2	90109,-4036
chr1:155107508-155107764	chr1	+	155107588	155107662	True	NM_004428,NM_018973,NM_153741,NM_018845,NM_001122839,NM_001122837,NM_182685	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,+,+,+,+	EFNA1,DPM3,DPM3,SLC50A1,SLC50A1,SLC50A1,EFNA1	-7290,5271,5384,625,625,625,-7290
chr3:128186027-128186800	chr3	+	128186088	128186704	True	NM_153330,NR_037890	chr3,chr3	-,+	DNAJB8,LOC285224	3,-3702
chr5:126987972-126988645	chr5	+	126987997	126988660	True	NM_001048252,NM_001127385,NR_015360	chr5,chr5,chr5	+,+,-	CTXN3,CTXN3,FLJ33630	-3335,46,430156
chr1:65432394-65433002	chr1	+	65432445	65433012	True	NM_203464,NM_002227	chr1,chr1	+,-	AK4,JAK1	180219,-258
chr13:44944946-44946121	chr13	+	44945113	44946167	True	NM_001010897,NM_006022	chr13,chr13	+,-	SERP2,TSC22D1	1810,64867
chr2:172860952-172861270	chr2	+	172860970	172861285	True	NM_199227,NM_004405	chr2,chr2	+,-	METAP1D,DLX2	3518,106243
chr10:99247768-99248890	chr10	+	99247895	99248629	True	NM_022362,NM_024954	chr10,chr10	-,+	MMS19,UBTD1	9801,10138
chr15:93115237-93115710	chr15	+	93115242	93115738	True	NR_021493,NM_153040	chr15,chr15	-,+	LOC100144604,C15orf32	91,-100387
chr2:42187-43089	chr2	+	42218	42959	True	NM_001077710,NM_001040649	chr2,chr2	-,+	FAM110C,ACP1	3679,221909
chr1:20396879-20397198	chr1	+	20396893	20397247	True	NM_000929,NM_012400	chr1,chr1	+,-	PLA2G5,PLA2G2D	-243,48811
chr15:52408002-52409890	chr15	+	52408220	52409939	True	NM_002748,NM_020396	chr15,chr15	+,-	MAPK6,BCL2L10	-96863,-3248
chr11:60524528-60524848	chr11	+	60524537	60524875	True	NM_152717,NM_001098835,NM_004778	chr11,chr11,chr11	+,+,-	MS4A15,MS4A15,GPR44	-248,-248,98619
chr1:241522473-241524133	chr1	+	241522603	241524174	True	NM_002924,NM_003679	chr1,chr1	-,+	RGS7,KMO	-2125,171505
chr5:180224715-180225201	chr5	+	180224771	180225241	True	NM_001114619,NR_027183,NM_001114620,NM_002406	chr5,chr5,chr5,chr5	-,+,-,-	MGAT1,LOC729678,MGAT1,MGAT1	5711,31717,5711,4857
chr14:51955583-51956542	chr14	+	51955610	51956575	True	NM_001042481,NR_037676	chr14,chr14	+,-	FRMD6,C14orf82	80,161938
chr18:9887872-9888619	chr18	+	9888011	9888632	True	NM_005134,NM_001098529,NM_032243	chr18,chr18,chr18	-,+,+	PPP4R1,TXNDC2,TXNDC2	-273411,-2339,-2339
chr1:48380356-48381276	chr1	+	48380408	48381318	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	81294,307038
chr10:128077446-128077671	chr10	+	128077484	128077706	True	NM_021641,NM_145235,NM_003474	chr10,chr10,chr10	-,+,-	ADAM12,FANK1,ADAM12	-357,-492427,-357
chr6:74366495-74367506	chr6	+	74366498	74367383	True	NM_001159587,NM_012434	chr6,chr6	+,-	CD109,SLC17A5	38124,-2761
chr22:23853635-23854026	chr22	+	23853704	23853954	True	NM_153615,NM_020070	chr22,chr22	+,-	RGL4,IGLL1	179093,68591
chr12:45269508-45269899	chr12	+	45269590	45269874	True	NM_001145108,NM_001145109,NM_001025356,NM_006159,NM_001145107	chr12,chr12,chr12,chr12,chr12	-,-,+,-,-	NELL2,NELL2,ANO6,NELL2,NELL2	423,-146,339895,423,809
chr17:34900077-34900505	chr17	+	34900085	34900261	True	NM_001163735,NM_024835,NM_178517,NM_001033580,NM_025109	chr17,chr17,chr17,chr17,chr17	-,+,+,-,-	MYO19,GGNBP2,PIGW,MYO19,MYO19	-8780,475,-8736,-8780,-8780
chr3:188891219-188892181	chr3	+	188891467	188892155	True	NM_198485,NM_018192	chr3,chr3	+,-	TPRG1,LEPREL1	-1755,946811
chr13:96206437-96206769	chr13	+	96206461	96206755	True	NM_006984,NM_014934	chr13,chr13	+,-	CLDN10,DZIP1	-1566,90252
chr12:22080941-22082307	chr12	+	22081458	22082324	True	NM_020298,NM_018686,NM_020297,NM_005691	chr12,chr12,chr12,chr12	-,+,-,-	ABCC9,CMAS,ABCC9,ABCC9	7355,116834,7355,7355
chr1:28196618-28197340	chr1	+	28196622	28197049	True	NM_001039477,NM_004848,NM_002946,NM_001105556	chr1,chr1,chr1,chr1	+,+,-,+	C1orf38,C1orf38,RPA2,C1orf38	2005,2005,44254,2005
chr18:15329170-15329898	chr18	+	15329288	15329806	True	NR_027417,NR_036153	chr18,chr18	-,+	LOC644669,MIR3156-2	-3370,-499174
chr18:15329170-15329898	chr2	+	132918288	132918338	False	NM_001508,NR_027019	chr2,chr2	+,-	GPR39,ANKRD30BL	255808,1237
chr7:126891195-126891619	chr7	+	126891308	126891644	True	NR_028041,NM_000845,NM_001127323,NM_001662	chr7,chr7,chr7,chr7	-,-,-,+	GRM8,GRM8,GRM8,ARF5	-7739,-7739,834,336761
chr16:67969836-67970055	chr16	+	67969860	67969994	True	NM_006742,NM_001907,NM_002801,NM_000229	chr16,chr16,chr16,chr16	+,-,-,-	PSKH1,CTRL,PSMB10,LCAT	-42736,-4082,836,8071
chr9:79521831-79522037	chr9	+	79521831	79521976	True	NM_001013735,NM_015225	chr9,chr9	+,-	FOXB2,PRUNE2	112594,-828
chr1:33115905-33116169	chr1	+	33116004	33116210	True	NM_001135255,NM_001135256,NM_178547,NM_005610	chr1,chr1,chr1,chr1	+,+,-,+	RBBP4,RBBP4,ZBTB8OS,RBBP4	538,748,25,538
chr11:65227539-65228036	chr11	+	65227730	65227830	True	NR_030343,NM_182556	chr11,chr11	+,-	MIR612,SLC25A45	-15852,-77588
chr6:136571417-136571710	chr6	+	136571425	136571723	True	NM_001099286,NM_018945,NM_138419	chr6,chr6,chr6	-,+,-	FAM54A,PDE7B,FAM54A	-18,-398642,-18
chr12:132377547-132377992	chr12	+	132377605	132377993	True	NM_175066,NM_003565	chr12,chr12	-,+	DDX51,ULK1	250937,1285
chr19:18143168-18143746	chr12	-	56666341	56666391	True	NM_173595,NM_144576,NM_001099337	chr12,chr12,chr12	-,+,+	ANKRD52,COQ10A,COQ10A	-14198,-5750,-5325
chr1:183440282-183440660	chr1	+	183440283	183440701	True	NM_201569,NM_201568,NM_173156,NM_001174061,NM_015039	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	SMG7,SMG7,SMG7,SMG7,NMNAT2	804,804,804,804,-52649
chr15:31948491-31949249	chr15	+	31948512	31949054	True	NM_015995,NM_130901	chr15,chr15	+,-	KLF13,OTUD7A	-329481,-970
chr15:31948491-31949249	chr15	-	31041003	31041053	False	NM_017762,NM_001039841	chr15,chr15	-,+	MTMR10,ARHGAP11B	242804,-122175
chr17:43043976-43044235	chr17	+	43043998	43044284	True	NM_213607,NM_006688	chr17,chr17	+,-	CCDC103,C1QL1	-66895,1410
chr10:116585466-116586675	chr10	+	116585589	116586376	True	NM_001135051,NM_020940,NM_001003408	chr10,chr10,chr10	+,+,-	FAM160B1,FAM160B1,ABLIM1	-4137,-4137,-141175
chr2:218939006-218939426	chr2	+	218939071	218939442	True	NM_198483,NR_002712	chr2,chr2	+,-	RUFY4,CXCR2P1	-5384,-13058
chr5:177423445-177423738	chr5	+	177423676	177423786	True	NM_006261,NM_001079527	chr5,chr5	-,+	PROP1,FAM153C	-433,11902
chr15:45800990-45801542	chr15	+	45801106	45801431	True	NR_022014,NM_013309	chr15,chr15	+,-	HMGN2P46,SLC30A4	1902,13630
chr2:74643616-74644048	chr2	+	74643735	74643931	True	NM_001145054,NM_032118	chr2,chr2	-,+	C2orf81,WDR54	971,4953
chr1:155989266-155990154	chr1	+	155989586	155990188	True	NM_014017,NM_003145	chr1,chr1	+,-	LAMTOR2,SSR2	34328,620
chr12:6417512-6419208	chr12	+	6417876	6418832	True	NM_001144857,NM_018173,NM_001065,NM_001144856	chr12,chr12,chr12,chr12	+,+,-,+	PLEKHG6,PLEKHG6,TNFRSF1A,PLEKHG6	2984,769,32502,1266
chrX:3632035-3632334	chrX	+	3632182	3632382	True	NM_005044,NM_004042	chrX,chrX	-,+	PRKX,ARSF	-507,-647400
chrX:3632035-3632334	chrX	+	3628718	3628775	False	NM_005044,NM_004042	chrX,chrX	-,+	PRKX,ARSF	2957,-643936
chr15:23206366-23207631	chr15	+	23206641	23207465	True	NR_024074,NR_003521	chr15,chr15	+,-	GOLGA8IP,WHAMML1	47776,942
chr15:23206366-23207631	chr15	-	28984496	28984812	False	NR_033351,NR_026589	chr15,chr15	-,+	GOLGA8F,WHAMML2	-206353,-2064
chr12:4227245-4227629	chr12	+	4227256	4227652	True	NM_001759,NM_020367	chr12,chr12	+,-	CCND2,PARP11	155249,-244648
chr9:136085283-136085588	chr9	+	136085300	136085486	True	NM_014581,NR_001275	chr9,chr9	-,+	OBP2B,CELP	-672,-127425
chr22:27011771-27012176	chr22	+	27011806	27012164	True	NM_001886,NM_001887	chr22,chr22	+,-	CRYBA4,CRYBB1	5763,1877
chr2:114033763-114034315	chr2	+	114033766	114034352	True	NR_015377,NM_003466,NM_013952,NM_013953,NM_013992	chr2,chr2,chr2,chr2,chr2	+,-,-,-,-	LOC654433,PAX8,PAX8,PAX8,PAX8	-39971,2196,2196,2196,2196
chr5:79649840-79650284	chr5	+	79650185	79650306	True	NR_003665,NM_032567	chr5,chr5	-,+	CRSP8P,SPZ1	-2400,-34456
chr3:197519816-197521701	chr3	+	197520245	197521496	True	NM_001145642,NM_032773	chr3,chr3	-,+	KIAA0226,LRCH3	-43677,-2158
chr10:105113764-105114301	chr10	+	105113812	105114115	True	NM_006951,NM_032154,NM_001011663	chr10,chr10,chr10	+,-,-	TAF5,PCGF6,PCGF6	13608,-2921,-2921
chr18:12306162-12306413	chr18	+	12306236	12306456	True	NM_006796,NM_032525	chr18,chr18	-,+	AFG3L2,TUBB6	70869,1800
chr5:1548483-1549385	chr5	+	1548611	1549279	True	NM_024830,NM_004553	chr5,chr5	-,+	LPCAT1,NDUFS6	-24535,252216
chr12:97053070-97054799	chr12	+	97053483	97054649	True	NM_002595,NM_001135176	chr12,chr12	-,+	CDK17,NEDD1	-259117,246351
chr4:8272918-8273634	chr4	+	8272955	8273617	True	NM_053044,NM_001130088	chr4,chr4	+,-	HTRA3,ABLIM2	-1521,-112396
chr11:74301538-74302397	chr11	+	74301729	74301793	True	NM_006591,NM_001144869	chr11,chr11	+,-	POLD3,LIPT2	1835,-96974
chr1:243407846-243409827	chr1	+	243408064	243409374	True	NM_006642,NM_001042405,NM_001042404,NM_014812	chr1,chr1,chr1,chr1	+,-,-,-	SDCCAG8,CEP170,CEP170,CEP170	9932,9394,9394,9394
chr11:113186684-113186969	chr11	+	113186693	113186996	True	NM_017868,NR_034101	chr11,chr11	+,-	TTC12,LOC100288346	-1493,-42070
chr4:89966692-89967720	chr4	+	89966802	89967659	True	NM_014883,NM_145715	chr4,chr4	-,+	FAM13A,TIGD2	10720,66308
chr20:5731049-5731566	chr20	+	5731171	5731357	True	NM_019593,NM_152504	chr20,chr20	-,+	GPCPD1,C20orf196	-139499,-179
chr19:58921414-58922383	chr19	+	58921423	58921894	True	NM_138466,NM_173548	chr19,chr19	-,+	ZNF837,ZNF584	-29034,-1411
chr9:138595051-138595332	chr9	+	138595083	138595331	True	NM_020822,NM_001012415,NM_001101677	chr9,chr9,chr9	+,-,-	KCNT1,SOHLH1,SOHLH1	-1103,-3709,-3709
chrX:41778210-41778770	chrX	+	41778242	41778656	True	NM_003688,NM_001126055,NM_001126054,NM_080817	chrX,chrX,chrX,chrX	-,-,-,+	CASK,CASK,CASK,GPR82	3687,3687,3687,-194893
chr1:11797060-11798875	chr1	+	11797083	11798835	True	NM_001040195,NM_001040194,NM_001040197,NM_001040196,NM_020350,NM_001127325	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-	AGTRAP,AGTRAP,AGTRAP,AGTRAP,AGTRAP,MAD2L2	-992,-992,-992,-992,-992,-45405
chr2:61245178-61245427	chr2	+	61245308	61245452	True	NM_144709,NM_002618	chr2,chr2	-,+	PUS10,PEX13	-11,-547
chr3:52189494-52190654	chr3	+	52189591	52190665	True	NM_015426,NM_199166,NM_001161580,NM_001161581	chr3,chr3,chr3,chr3	-,+,-,-	POC1A,ALAS1,POC1A,POC1A	-885,41450,-885,-885
chr4:57770903-57771405	chr4	+	57770902	57770962	True	NM_032313,NM_001193508,NM_005612	chr4,chr4,chr4	-,+,+	C4orf14,REST,REST	72914,4116,3079
chr19:46284205-46284731	chr19	+	46284209	46284719	True	NM_001081563,NM_001081562,NM_004409,NM_001081560,NM_004497	chr19,chr19,chr19,chr19,chr19	-,-,-,-,+	DMPK,DMPK,DMPK,DMPK,FOXA3	-348,1146,1146,1146,82798
chr6:137106604-137106809	chr6	+	137106628	137106798	True	NM_000288,NM_005923	chr6,chr6	+,-	PEX7,MAP3K5	36903,6908
chr17:39621624-39621991	chr17	+	39621673	39621959	True	NM_030975,NM_002278	chr17,chr17	+,-	KRTAP9-9,KRT32	-210088,1729
chr1:201977451-201977901	chr1	+	201977650	201977947	True	NM_012134,NM_004433,NM_001114309	chr1,chr1,chr1	-,+,+	LMOD1,ELF3,ELF3	-61934,1742,1742
chr12:107003087-107003349	chr12	+	107003087	107003349	True	NM_006825,NM_002920	chr12,chr12	-,+	CKAP4,RFX4	-361374,-8189
chr2:65659918-65660590	chr2	+	65659945	65660641	True	NM_181784,NM_005722	chr2,chr2	-,+	SPRED2,ACTR2	-289,-205167
chr1:226957823-226958616	chr1	+	226957882	226958194	True	NM_002221,NM_000447	chr1,chr1	-,+	ITPKB,PSEN2	-31006,100078
chr12:8115653-8117459	chr12	+	8115667	8117189	True	NM_006931,NM_018416	chr12,chr12	-,+	SLC2A3,FOXJ2	-26775,68169
chr8:59408080-59409365	chr8	+	59408391	59409307	True	NM_000780,NM_001007067	chr8,chr8	-,+	CYP7A1,SDCBP	3463,56420
chr1:86047793-86048255	chr1	+	86047876	86048270	True	NM_001554,NM_001134445	chr1,chr1	+,-	CYR61,DDAH1	-1483,-3830
chr15:33357642-33358852	chr15	+	33357684	33358792	True	NM_001036,NM_001103184	chr15,chr15	+,-	RYR3,FMN1	244384,1343
chr1:1858525-1858735	chr1	+	1858563	1858687	True	NM_138705,NM_178545	chr1,chr1	+,-	CALML6,TMEM52	-12348,-7823
chr7:43623284-43623514	chr7	+	43623305	43623553	True	NM_018224,NM_004760	chr7,chr7	-,+	C7orf44,STK17A	145580,-664
chr4:8583296-8583628	chr4	+	8583295	8583615	True	NM_003501,NM_080819	chr4,chr4	-,+	ACOX3,GPR78	-140843,-1055
chr1:175700653-175702355	chr1	+	175700928	175702130	True	NM_003285,NM_022093	chr1,chr1	-,+	TNR,TNN	10672,-663985
chr21:35883201-35883990	chr21	+	35883290	35884016	True	NM_000219,NM_058182	chr21,chr21	-,+	KCNE1,FAM165B	35,-135592
chr3:58476765-58477065	chr3	+	58476788	58476998	True	NM_153331,NM_003500,NM_001128214	chr3,chr3,chr3	+,-,+	KCTD6,ACOX2,KCTD6	7093,45981,824
chr22:50684220-50684513	chr22	+	50684253	50684527	True	NM_032019,NM_031454,NM_001159286,NM_020461	chr22,chr22,chr22,chr22	-,+,-,-	HDAC10,SELO,HDAC10,TUBGCP6	5357,-44896,5357,-853
chr4:152327701-152328812	chr4	+	152327719	152328831	True	NM_001128923,NM_001109977	chr4,chr4	-,+	SH3D19,FAM160A1	-180059,1566
chr17:7790218-7791061	chr17	+	7790239	7790916	True	NM_005852,NM_001005273,NR_024349,NM_001005271	chr17,chr17,chr17,chr17	+,+,-,+	CHD3,CHD3,LOC284023,CHD3	1252,1252,28399,-2168
chr1:28199700-28200757	chr1	+	28199792	28200548	True	NM_001039477,NM_004848,NM_002946,NM_001105556	chr1,chr1,chr1,chr1	+,+,-,+	C1orf38,C1orf38,RPA2,C1orf38	-788,-788,40738,-788
chr11:62434309-62435395	chr11	+	62434315	62435429	True	NR_004390,NM_024099,NM_001085372,NM_001043229	chr11,chr11,chr11,chr11	+,-,+,+	SNORA57,C11orf48,C11orf83,METTL12	-1472,3862,3696,-1587
chr13:95130348-95130653	chr13	+	95130348	95130524	True	NM_001922,NM_001129889,NM_180989	chr13,chr13,chr13	-,-,+	DCT,DCT,GPR180	1463,1463,123579
chr11:62034810-62035638	chr11	+	62035215	62035685	True	NM_002411,NM_206998	chr11,chr11	+,-	SCGB2A2,SCGB1D4	1944,30901
chr13:47472180-47472823	chr13	+	47472332	47472842	True	NM_001164213,NM_000621,NM_001165947	chr13,chr13,chr13	+,-,-	LRCH1,HTR2A,HTR2A	-345087,-1163,-1163
chr10:12114343-12115436	chr10	+	12114528	12114739	True	NM_018706,NM_080599	chr10,chr10	+,-	DHTKD1,UPF2	-3651,-29505
chr5:102431966-102433745	chr5	+	102432240	102433433	True	NM_015216,NM_017676	chr5,chr5	+,-	PPIP5K2,GIN1	31823,22460
chr22:41841162-41841428	chr22	+	41841204	41841441	True	NM_001098,NM_016272	chr22,chr22	+,-	ACO2,TOB2	23687,1637
chr10:104178419-104178645	chr10	+	104178429	104178567	True	NM_002779,NM_024326	chr10,chr10	-,+	PSD,FBXL15	384,1003
chr6:26597380-26597718	chr6	+	26597391	26597753	True	NM_013375,NM_024639	chr6,chr6	+,-	ABT1,ZNF322A	-262,62260
chr12:16553536-16555401	chr12	+	16553540	16555282	True	NM_001170798,NM_145764	chr12,chr12	-,+	SLC15A5,MGST1	-122921,-47248
chr11:124865816-124867410	chr11	+	124866018	124867185	True	NM_152722,NM_025004	chr11,chr11	-,+	HEPACAM,CCDC15	-59710,-42057
chr22:38351848-38352258	chr22	+	38352011	38352071	True	NM_032561,NM_021974	chr22,chr22	-,+	C22orf23,POLR2F	-2408,-2388
chrY:26197175-26197391	chrY	+	26197179	26197243	True	NM_004680,NM_001003895,NM_001003894,NR_001526,NM_170723	chrY,chrY,chrY,chrY,chrY	-,-,-,+,-	CDY1,CDY1B,CDY1B,TTTY17A,CDY1	-3018,-3018,-3018,434235,-3018
chrY:26197175-26197391	chrY	-	27765181	27765245	False	NM_004680,NR_002179,NM_001003895,NM_001003894,NM_170723	chrY,chrY,chrY,chrY,chrY	+,-,+,+,+	CDY1,TTTY17C,CDY1B,CDY1B,CDY1	3018,-434261,3018,3018,3018
chrY:26197175-26197391	chrY	+	19995133	19995197	False	NM_004825,NM_001001722	chrY,chrY	-,-	CDY2A,CDY2B	-3033,-3034
chrY:26197175-26197391	chrY	-	20134569	20134633	False	NM_004825,NM_001001722	chrY,chrY	+,+	CDY2A,CDY2B	3033,3034
chr1:38471837-38472169	chr1	+	38472049	38472169	True	NM_004468,NM_016037	chr1,chr1	-,+	FHL3,UTP11L	-815,6214
chr3:181322833-181323693	chr3	+	181323002	181323738	True	NR_033725,NR_004053	chr3,chr3	-,+	DNAJC19,SOX2OT	-615440,4412
chr22:41470195-41470739	chr22	+	41470198	41470696	True	NM_138481,NR_031694	chr22,chr22	-,+	CHADL,MIR1281	166289,17820
chrX:40435137-40437113	chrX	+	40435237	40437129	True	NM_005765,NM_144970	chrX,chrX	+,-	ATP6AP2,CXorf38	3086,69740
chr12:53097322-53098063	chr12	+	53097400	53098047	True	NM_199187,NM_175078	chr12,chr12	+,-	KRT18,KRT77	244607,-153
chr11:17562999-17564694	chr11	+	17563074	17564596	True	NM_153676,NM_002478,NM_005709	chr11,chr11,chr11	-,+,-	USH1C,MYOD1,USH1C	1417,176513,1417
chr14:77778917-77780141	chr14	+	77779082	77779974	True	NM_001513,NM_145870,NM_145871,NM_013382	chr14,chr14,chr14,chr14	+,+,+,-	GSTZ1,GSTZ1,GSTZ1,POMT2	7731,7255,7255,7301
chr3:48936404-48937149	chr3	+	48936613	48937013	True	NM_006321,NM_000387	chr3,chr3	+,-	ARIH2,SLC25A20	19267,-187
chr10:135039822-135040063	chr10	+	135039886	135040100	True	NR_030170,NM_003577	chr10,chr10	-,+	MIR202,UTF1	21074,3677
chr1:209999366-209999707	chr1	+	209999366	209999664	True	NM_006147,NM_014388	chr1,chr1	-,+	IRF6,DIEXF	-19887,1647
chr19:45394259-45394549	chr19	+	45394264	45394438	True	NM_145288,NM_006114,NM_001128916,NM_001128917	chr19,chr19,chr19,chr19	-,+,+,+	ZNF296,TOMM40,TOMM40,TOMM40	185300,38,38,38
chr3:167793294-167794201	chr3	+	167793381	167793974	True	NM_014498,NR_021485	chr3,chr3	-,+	GOLIM4,EGFEM1P	19500,173335
chr3:49893197-49893699	chr3	+	49893355	49893578	True	NM_005879,NM_203370	chr3,chr3	-,+	TRAIP,C3orf54	465,-52720
chr19:49256413-49256618	chr19	+	49256542	49256640	True	NM_019113,NM_000148,NM_182575	chr19,chr19,chr19	+,-,-	FGF21,FUT1,IZUMO1	2703,2057,-6376
chr14:31505095-31506149	chr14	+	31505230	31506017	True	NM_001083893,NM_014574,NM_001128126	chr14,chr14,chr14	-,-,+	STRN3,STRN3,AP4S1	-9623,-9623,-10605
chr10:70305969-70306779	chr10	+	70306063	70306123	True	NM_030625,NM_152707	chr10,chr10	+,-	TET1,SLC25A16	13993,-18783
chr1:31849841-31850748	chr1	+	31849923	31850725	True	NM_001199038,NM_004102	chr1,chr1	+,-	SERINC2,FABP3	31686,-4000
chr17:21186787-21187227	chr17	+	21186816	21187242	True	NM_152914,NM_145109,NM_002756	chr17,chr17,chr17	-,+,+	C17orf103,MAP2K3,MAP2K3	-30238,725,4105
chr10:62122659-62123771	chr10	+	62122683	62123327	True	NM_001170406,NM_020987	chr10,chr10	+,-	CDK1,ANK3	414761,26358
chr10:50320471-50321464	chr10	+	50320537	50321481	True	NM_144984,NM_001135196,NM_001031746	chr10,chr10,chr10	-,+,-	C10orf72,C10orf71,C10orf72	2128,185705,2128
chr9:127702792-127703058	chr9	+	127702810	127703080	True	NM_030978,NM_002077	chr9,chr9	+,-	ARPC5L,GOLGA1	-71377,356
chr2:150187400-150187605	chr2	+	150187520	150187604	True	NM_015702,NM_001195685,NM_194317	chr2,chr2,chr2	-,+,+	MMADHC,LYPD6,LYPD6	256776,-1072,-542
chr12:108716130-108717188	chr12	+	108716191	108717191	True	NM_001142345,NM_014653,NM_007076	chr12,chr12,chr12	-,+,+	CMKLR1,WSCD2,FICD	-1752,-192731,191859
chr19:58180232-58180616	chr19	+	58180240	58180346	True	NM_152677,NM_001085384	chr19,chr19	+,-	ZSCAN4,ZNF154	-8,40289
chr15:34677336-34677590	chr15	+	34677383	34677580	True	NM_175741,NR_036050,NM_181077,NR_036261	chr15,chr15,chr15,chr15	+,-,-,-	C15orf55,MIR1233-1,GOLGA8A,MIR1233-2	-39368,-3032,4472,-3032
chr15:34677336-34677590	chr15	+	34823604	34823801	False	NM_001023567,NM_175741,NR_036050,NR_036261	chr15,chr15,chr15,chr15	-,+,-,-	GOLGA8B,C15orf55,MIR1233-1,MIR1233-2	4472,-185589,-3032,-3032
chr1:161282664-161283491	chr1	+	161282855	161283443	True	NM_003001,NM_001035511,NM_000530,NM_001035513,NM_001035512	chr1,chr1,chr1,chr1,chr1	+,+,-,+,+	SDHC,SDHC,MPZ,SDHC,SDHC	722,722,-3093,722,722
chr8:10586549-10586757	chr8	+	10586561	10586741	True	NM_001040032,NM_031439	chr8,chr8	+,-	C8orf74,SOX7	-56465,1331
chr19:14627280-14628423	chr19	+	14627291	14628245	True	NM_006145,NR_030369	chr19,chr19	-,+	DNAJB1,MIR639	1010,12109
chr7:6542111-6542399	chr7	+	6542156	6542410	True	NM_006854,NM_001134387	chr7,chr7	-,+	KDELR2,ZDHHC4	-18307,74654
chr12:100593106-100593526	chr12	+	100593167	100593513	True	NM_022496,NR_024261,NR_031728	chr12,chr12,chr12	+,-,+	ACTR6,GOLGA2B,MIR1827	1060,-26046,-9556
chr7:99421853-99422450	chr7	+	99421983	99422222	True	NM_022820,NM_057095,NM_057096,NM_017460	chr7,chr7,chr7,chr7	+,+,+,-	CYP3A43,CYP3A43,CYP3A43,CYP3A4	3413,3413,3413,-40172
chr22:50986662-50986970	chr22	+	50986763	50986883	True	NM_001123225,NM_138433	chr22,chr22	-,+	C22orf41,KLHDC7B	14495,-352
chr5:18712878-18713539	chr5	+	18713194	18713576	True	NM_001167667,NM_006317	chr5,chr5	-,+	CDH18,BASP1	1274827,-1495495
chr6:99966028-99966607	chr6	+	99966300	99966614	True	NM_001080481,NM_001195131	chr6,chr6	-,+	USP45,LOC100130890	-3048,2255
chr19:632969-633297	chr19	+	633000	633270	True	NM_005035,NM_020637	chr19,chr19	-,+	POLRMT,FGF22	348,6655
chr15:78285029-78285898	chr15	+	78285246	78285832	True	NM_001101404,NR_026998	chr15,chr15	+,-	SH2D7,LOC91450	99094,785
chr6:46635870-46637474	chr6	+	46636318	46637389	True	NM_016593,NM_004277	chr6,chr6	-,+	CYP39A1,SLC25A27	-15795,-15717
chr18:59997453-59997856	chr18	+	59997471	59997835	True	NM_176787,NM_003839	chr18,chr18	-,+	PIGN,TNFRSF11A	-143182,-4974
chr15:83475210-83476724	chr15	+	83475215	83476397	True	NM_001007122,NM_001080435	chr15,chr15	-,+	FSD2,WHAMM	-409,1575
chr4:41958907-41960121	chr4	+	41959068	41959980	True	NM_018126,NM_001159547	chr4,chr4	+,-	TMEM33,BEND4	-21992,194971
chr2:219158414-219160000	chr2	+	219158803	219159931	True	NM_015488,NM_022152	chr2,chr2	+,-	PNKD,TMBIM1	-23739,-1523
chr19:38270544-38271469	chr19	+	38270635	38271515	True	NM_001172689,NM_001172690,NM_001172691,NM_001172692,NM_015073,NM_152360	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,+,-	ZNF573,ZNF573,ZNF573,ZNF573,SIPA1L3,ZNF573	-405,-405,-405,-405,126352,-405
chr16:1129025-1129438	chr16	+	1129048	1129416	True	NM_001172560,NM_001053,NR_027242	chr16,chr16,chr16	+,+,-	SSTR5,SSTR5,LOC146336	-6343,-318,-317
chr9:130478524-130478829	chr9	+	130478557	130478761	True	NM_001002913,NM_144965,NM_001012502	chr9,chr9,chr9	-,+,+	PTRH1,TTC16,C9orf117	-621,-250,-9337
chr12:119739766-119740785	chr12	+	119740111	119740682	True	NR_024246,NM_178499	chr12,chr12	-,+	LOC144742,CCDC60	562,31834
chr2:122496384-122497744	chr2	+	122496472	122497702	True	NM_032390,NM_004622	chr2,chr2	-,+	MKI67IP,TSN	-1969,15418
chr22:25054905-25055195	chr22	+	25055135	25055197	True	NR_024593,NR_024494	chr22,chr22	-,+	POM121L10P,BCRP3	-21,-26304
chr22:25054905-25055195	chr22	-	24647505	24647567	False	NM_001099782,NM_001099781,NM_004121,NR_003714	chr22,chr22,chr22,chr22	-,-,-,+	GGT5,GGT5,GGT5,POM121L9P	-6395,-6395,-6395,21
chr21:40981959-40982487	chr21	+	40981986	40982352	True	NR_026543,NR_026542,NM_006057	chr21,chr21,chr21	-,-,+	C21orf88,C21orf88,B3GALT5	2447,2447,46901
chr9:129562284-129563037	chr9	+	129562642	129562915	True	NM_014007,NM_001135776,NM_012098	chr9,chr9,chr9	+,+,-	ZBTB43,ZBTB43,ANGPTL2	4369,4369,322180
chr10:67370282-67371931	chr10	+	67370550	67371685	True	NR_001446,NM_001127384	chr10,chr10	+,-	ANXA2P3,CTNNA3	-785328,2053796
chr7:6897815-6899020	chr7	+	6897865	6899003	True	NM_198097,NM_173565	chr7,chr7	-,+	C7orf28B,RSPH10B	-31939,-104176
chr7:50132998-50133411	chr7	+	50133091	50133354	True	NM_001161834,NM_001159878,NM_007009	chr7,chr7,chr7	+,-,-	C7orf72,ZPBP,ZPBP	2327,-231,-231
chr9:131550273-131551320	chr9	+	131550340	131551160	True	NM_018201,NM_006336	chr9,chr9	+,-	TBC1D13,ZER1	-884,-16142
chr6:99284143-99284949	chr6	+	99284238	99284967	True	NM_005604,NM_012160	chr6,chr6	+,-	POU3F2,FBXL4	-1716,110938
chr12:19593350-19595061	chr12	+	19593626	19594868	True	NM_033123,NM_153207,NM_001114176	chr12,chr12,chr12	-,+,+	PLCZ1,AEBP2,AEBP2	-702708,-1069,-1069
chr4:25023952-25025031	chr4	+	25024089	25025067	True	NR_037934,NM_018176	chr4,chr4	+,-	LOC285540,LGI2	137226,7397
chr12:49502267-49503634	chr12	+	49502573	49503563	True	NM_005430,NM_018113	chr12,chr12	+,-	WNT1,LMBR1L	-130388,1167
chr9:137000121-137000367	chr9	+	137000125	137000365	True	NR_023344,NM_017588,NM_052821	chr9,chr9,chr9	-,+,+	RNU6ATAC,WDR5,WDR5	29371,844,4548
chr2:178272382-178273832	chr2	+	178272425	178273876	True	NM_003659,NR_026966	chr2,chr2	+,-	AGPS,LOC100130691	-15013,-15006
chr1:179335596-179335807	chr1	+	179335619	179335816	True	NM_001136001,NM_144696	chr1,chr1	-,+	ABL2,AXDND1	-136800,-815
chr3:183145717-183146047	chr3	+	183145733	183146027	True	NM_015078,NM_032047	chr3,chr3	-,+	MCF2L2,B3GNT5	22,-174760
chr11:238525-240150	chr11	+	238940	240084	True	NM_002817,NM_175932,NM_001017524,NM_012239	chr11,chr11,chr11,chr11	+,+,-,-	PSMD13,PSMD13,SIRT3,SIRT3	-2183,-2183,-2578,-2578
chr16:68880086-68880701	chr16	+	68880246	68880758	True	NM_001040146,NM_024562	chr16,chr16	-,+	CHTF8,TMCO7	285364,-2801
chr22:21321737-21322061	chr22	+	21321794	21322040	True	NM_001018060,NM_001008695,NR_027464,NM_001146288,NM_144704	chr22,chr22,chr22,chr22,chr22	+,-,+,+,+	AIFM3,THAP7,AIFM3,AIFM3,AIFM3	-2427,34414,-398,-398,-2427
chr1:168194522-168194801	chr1	+	168194615	168194779	True	NR_026844,NM_199344	chr1,chr1	-,+	ANKRD36BP1,SFT2D2	21939,475
chr15:22548027-22548990	chr15	+	22548086	22548772	True	NR_027407,NR_033735	chr15,chr15	-,+	GOLGA8DP,REREP3	167006,-1572
chr11:62781793-62783207	chr11	+	62781846	62783108	True	NM_001184736,NR_037193,NM_001184732,NM_001184733,NM_004254	chr11,chr11,chr11,chr11,chr11	-,+,-,-,-	SLC22A8,SLC3A2,SLC22A8,SLC22A8,SLC22A8	259,-132726,259,259,259
chr2:234672178-234672924	chr2	+	234672244	234672955	True	NR_037695,NR_037694,NR_037696,NM_000463	chr2,chr2,chr2,chr2	-,-,-,+	LOC100286922,LOC100286922,LOC100286922,UGT1A1	-8253,-8253,-8253,-3376
chr9:33166943-33167271	chr9	+	33166965	33167203	True	NM_001497,NM_014471	chr9,chr9	-,+	B4GALT1,SPINK4	203,72992
chr17:6878372-6879823	chr17	+	6878469	6879655	True	NM_000697,NR_029712	chr17,chr17	+,-	ALOX12,MIR195	19728,41415
chr8:144680322-144680641	chr8	+	144680331	144680633	True	NM_001130053,NM_032378,NM_001130055,NM_001130056,NM_001130057,NM_032862,NM_001960,NM_001195203	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,-,+,-,-	EEF1D,EEF1D,EEF1D,EEF1D,EEF1D,TIGD5,EEF1D,EEF1D	-486,-486,-486,-486,-773,-308,-486,-486
chr20:3028703-3029754	chr20	+	3028795	3029515	True	NM_001501,NM_178331,NM_000490,NM_178332,NM_030811	chr20,chr20,chr20,chr20,chr20	+,+,-,+,+	GNRH2,GNRH2,AVP,GNRH2,MRPS26	-4579,-4579,35905,-4579,-2172
chr22:31033092-31034208	chr22	+	31033648	31034075	True	NM_001001479,NM_152511	chr22,chr22	+,-	SLC35E4,DUSP18	-1917,29848
chr17:61975224-61975726	chr17	+	61975364	61975438	True	NM_022641,NM_022640,NR_002947,NM_001317	chr17,chr17,chr17,chr17	-,-,+,-	CSH1,CSH1,TCAM1P,CSH1	-1343,-1343,-41039,-1343
chr17:61975224-61975726	chr17	+	61952686	61952764	False	NM_020991,NM_022645,NM_022644,NM_022557,NM_022556,NR_002947,NM_002059,NM_022558	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,+,-,-	CSH2,CSH2,CSH2,GH2,GH2,TCAM1P,GH2,GH2	-1597,-1597,-1597,6519,6519,-18361,6519,6519
chr2:241073987-241074383	chr2	+	241074105	241074419	True	NM_001163424,NM_148961,NM_138336,NM_002081	chr2,chr2,chr2,chr2	-,-,-,+	MYEOV2,OTOS,MYEOV2,GPC1	1378,5704,1395,300695
chr12:124013532-124014803	chr12	+	124013581	124014510	True	NR_037470,NM_178314	chr12,chr12	+,-	MIR3908,RILPL1	6445,3805
chr21:46131915-46132150	chr21	+	46131949	46132193	True	NM_198699,NM_144991	chr21,chr21	+,-	KRTAP10-12,TSPEAR	-14913,-454
chr1:110932908-110934840	chr1	+	110933000	110934533	True	NM_022768,NM_004696,NM_001201549,NM_001201548,NM_001201547,NM_001201546	chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,-,-,-	RBM15,SLC16A4,SLC16A4,SLC16A4,SLC16A4,SLC16A4	-51114,-77,-77,-77,-77,-77
chr6:89855870-89856142	chr6	+	89855905	89856139	True	NM_001010853,NM_080743	chr6,chr6	+,-	PM20D2,SRSF12	-187,-28105
chr20:1166500-1166985	chr20	+	1166505	1167033	True	NM_018354,NM_001009612	chr20,chr20	-,+	C20orf46,C20orf202	-1388,17064
chr11:63303922-63304578	chr11	+	63304109	63304489	True	NM_017878,NM_004585	chr11,chr11	-,+	HRASLS2,RARRES3	26416,-59
chr19:7554018-7554600	chr19	+	7554211	7554623	True	NM_080662,NM_198534	chr19,chr19	-,+	PEX11G,C19orf45	-306,7821
chr7:40176450-40178132	chr7	+	40176624	40177831	True	NM_024728,NM_001193311,NM_001193312,NM_001193313,NM_138701	chr7,chr7,chr7,chr7,chr7	+,+,+,+,-	C7orf10,C7orf10,C7orf10,C7orf10,C7orf11	-2108,-2108,-2108,-2108,-2373
chr8:132053612-132053861	chr8	+	132053620	132053840	True	NM_015137,NM_001115	chr8,chr8	+,-	EFR3A,ADCY8	862515,-785
chr19:14376930-14377518	chr19	+	14376964	14377236	True	NM_014921,NM_001025160	chr19,chr19	-,+	LPHN1,CD97	-59967,114976
chr10:127264842-127265379	chr10	+	127264842	127265406	True	NR_023362,NM_001128202	chr10,chr10	+,-	LOC100169752,C10orf122	-1953,106357
chrX:118987216-118988245	chrX	+	118987261	118987998	True	NM_004541,NM_080632,NM_023010	chrX,chrX,chrX	+,-,-	NDUFA1,UPF3B,UPF3B	17735,-270,-270
chr10:38462410-38464367	chr10	+	38462819	38464362	True	NM_145011,NR_024524	chr10,chr10	-,+	ZNF25,LOC100129055	-197366,236
chr6:79582863-79583285	chr6	+	79583136	79583288	True	NM_001010844,NM_017934	chr6,chr6	+,-	IRAK1BP1,PHIP	-6006,204773
chr17:8064767-8065649	chr17	+	8064796	8065492	True	NM_002616,NR_037447,NM_014232	chr17,chr17,chr17	-,+,-	PER1,MIR3676,VAMP2	-9043,25000,851
chr12:94544487-94544782	chr12	+	94544576	94544828	True	NM_001042399,NM_005761	chr12,chr12	-,+	CCDC41,PLXNC1	308986,-2128
chr1:23519728-23519963	chr1	+	23519793	23519901	True	NR_036057,NM_000864	chr1,chr1	+,-	MIR3115,HTR1D	-149046,1371
chr7:142961390-142961921	chr7	+	142961584	142961940	True	NM_001143680,NM_001143681,NM_001143679,NM_015917,NM_014690	chr7,chr7,chr7,chr7,chr7	+,+,+,+,-	GSTK1,GSTK1,GSTK1,GSTK1,FAM131B	-1113,-1113,-1113,-1113,97283
chrX:55046548-55047964	chrX	+	55046580	55047893	True	NM_001037967,NM_014481,NM_000032,NM_001037968	chrX,chrX,chrX,chrX	-,+,-,-	ALAS2,APEX2,ALAS2,ALAS2	9667,-19860,9667,9667
chr1:152970713-152971355	chr1	+	152971025	152971377	True	NM_006945,NM_005416,NM_001097589	chr1,chr1,chr1	-,+,+	SPRR2D,SPRR3,SPRR3	42269,2845,2845
chr11:64825819-64826575	chr11	+	64826116	64826420	True	NM_005468,NM_013299	chr11,chr11	-,+	NAALADL1,SAC3D1	-107,-17791
chr11:2925071-2925468	chr11	+	2925147	2925410	True	NM_183233,NM_002555,NM_007105	chr11,chr11,chr11	+,+,-	SLC22A18,SLC22A18,SLC22A18AS	-4248,-1687,2
chr17:39135108-39135676	chr17	+	39135163	39135493	True	NM_033061,NM_182497	chr17,chr17	+,-	KRTAP4-7,KRT40	104965,7944
chr6:170598779-170599020	chr6	+	170598833	170598899	True	NM_032448,NM_005618	chr6,chr6	+,-	FAM120B,DLL1	16944,848
chr15:25455749-25455989	chr15	+	25455801	25456035	True	NR_003315,NR_003314,NR_003313,NR_003312,NR_003311,NR_003310,NR_003496,NR_022010,NR_003495,NR_003309,NM_130838,NR_003342,NR_003343,NR_003307	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,+,-,+,+,+	SNORD115-23,SNORD115-22,SNORD115-21,SNORD115-20,SNORD115-19,SNORD115-18,HBII-52-27,PAR4,SNORD115-24,SNORD115-17,UBE3A,SNORD115-25,SNORD115-26,SNORD115-15	907,-787,-4443,-4443,-6348,-6348,9614,803,2770,-6348,194668,4652,7728,-4443
chr2:55844853-55845134	chr2	+	55844899	55845123	True	NM_080667,NM_020463,NM_001122964	chr2,chr2,chr2	+,-,-	CCDC104,SMEK2,SMEK2	-98210,-103,-103
chr1:242016117-242016737	chr1	+	242016479	242016777	True	NM_006027,NM_001004343,NM_130398,NM_003686	chr1,chr1,chr1,chr1	+,-,+,+	EXO1,MAP1LC3C,EXO1,EXO1	-4497,145658,-5037,-4497
chr14:104606060-104606290	chr14	+	104606122	104606338	True	NM_004894,NM_015656	chr14,chr14	-,+	C14orf2,KIF26A	-218219,-1113
chr1:20989756-20990971	chr1	+	20989883	20990852	True	NM_032409,NM_005216	chr1,chr1	+,-	PINK1,DDOST	-29986,-1846
chr22:37407115-37408806	chr22	+	37407301	37408167	True	NM_021126,NM_001163857,NM_001013436,NR_024038,NM_178552,NM_003312,NM_001130517	chr22,chr22,chr22,chr22,chr22,chr22,chr22	+,-,+,+,-,-,+	MPST,C22orf33,MPST,MPST,C22orf33,TST,MPST	7534,-3424,7534,7534,-3424,7374,7534
chr4:9656449-9657149	chr4	+	9656623	9657145	True	NR_031688,NM_000798	chr4,chr4	-,+	MIR548I2,DRD5	-98686,126112
chr17:79622691-79622991	chr17	+	79622821	79622991	True	NM_002602,NM_199287,NR_026872	chr17,chr17,chr17	-,+,-	PDE6G,CCDC137,PDE6G	666,10769,666
chr13:41363187-41363389	chr13	+	41363196	41363350	True	NM_005830,NM_014252	chr13,chr13	-,+	MRPS31,SLC25A15	-17849,196
chr12:112199874-112201070	chr12	+	112200036	112201081	True	NM_006768,NM_001204889,NM_000690	chr12,chr12,chr12	-,+,+	BRAP,ALDH2,ALDH2	-76246,3609,3609
chr2:213364773-213365032	chr2	+	213364876	213365046	True	NM_001042599,NM_001025436	chr2,chr2	-,+	ERBB4,SPAG16	38356,784069
chrX:54072737-54073153	chrX	+	54073048	54073151	True	NM_001184897,NM_001184896,NM_015107,NM_058163,NM_001184898	chrX,chrX,chrX,chrX,chrX	-,-,-,+,-	PHF8,PHF8,PHF8,TSR2,PHF8	-2441,-1479,-2441,393701,-3421
chr20:62105898-62106213	chr20	+	62105904	62106113	True	NM_172106,NM_172107,NM_024299,NM_172108,NM_172109,NM_004518	chr20,chr20,chr20,chr20,chr20,chr20	-,-,+,-,-,-	KCNQ2,KCNQ2,PPDPF,KCNQ2,KCNQ2,KCNQ2	-1911,-1911,46019,-1911,-1911,-1911
chr2:135474471-135475121	chr2	+	135474474	135475142	True	NM_138326,NM_030923	chr2,chr2	+,-	ACMSD,TMEM163	121043,1481
chr3:20088710-20089195	chr3	+	20088850	20089068	True	NM_003884,NR_027694	chr3,chr3	+,-	KAT2B,C3orf48	-7383,-35085
chr6:33265102-33265320	chr6_qbl_hap6	+	4497359	4497607	False	NM_001164267,NR_028387,NM_004761,NM_005452,NM_001185181,NM_014260	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	-,-,-,-,+,+	WDR46,RGL2,RGL2,WDR46,PFDN6,PFDN6	-7812,1859,1859,-7812,-7755,-7789
chr6:33265102-33265320	chr6_mcf_hap5	+	4738863	4739111	False	NR_028387,NM_014260,NM_001164267,NM_005452,NM_004761	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	-,+,-,-,-	RGL2,PFDN6,WDR46,WDR46,RGL2	1859,-7792,-7815,-7815,1859
chr6:33265102-33265320	chr6_cox_hap2	+	4708933	4709181	False	NR_028387,NM_014260,NM_001164267,NM_005452,NM_004761	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	-,+,-,-,-	RGL2,PFDN6,WDR46,WDR46,RGL2	1859,-7792,-7815,-7815,1859
chr6:33265102-33265320	chr6	+	33265119	33265367	True	NM_001164267,NR_028387,NM_004761,NM_005452,NM_001185181,NM_014260	chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,-,+,+	WDR46,RGL2,RGL2,WDR46,PFDN6,PFDN6	-7815,1859,1859,-7815,-7758,-7792
chr6:33265102-33265320	chr6_dbb_hap3	+	4546445	4546693	False	NR_028387,NM_014260,NM_001164267,NM_005452,NM_004761	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	-,+,-,-,-	RGL2,PFDN6,WDR46,WDR46,RGL2	1859,-7792,-7815,-7815,1859
chr1:160829919-160830755	chr1	+	160830040	160830770	True	NM_002348,NM_001166663,NM_001166664,NM_016382	chr1,chr1,chr1,chr1	+,-,-,-	LY9,CD244,CD244,CD244	-64174,1972,1972,1972
chr14:62167958-62168866	chr14	+	62168024	62168778	True	NM_001530,NM_001017970,NM_181054	chr14,chr14,chr14	+,-,+	HIF1A,TMEM30B,HIF1A	-5964,-419494,-5964
chr18:45447241-45448380	chr18	+	45447725	45448403	True	NM_005901,NM_001142397,NM_001135937,NM_001003652	chr18,chr18,chr18,chr18	-,+,-,-	SMAD2,CTIF,SMAD2,SMAD2	8573,617023,9162,9159
chr17:38659167-38659622	chr17	+	38659271	38659447	True	NM_032865,NM_001552	chr17,chr17	-,+	TNS4,IGFBP4	-1417,-59646
chr4:155662814-155663512	chr4	+	155662825	155663508	True	NM_004744,NM_021870	chr4,chr4	+,-	LRAT,FGG	1654,-128923
chr19:5339127-5339748	chr19	+	5339341	5339684	True	NM_130854,NM_130855,NM_002850,NM_181710,NM_130853	chr19,chr19,chr19,chr19,chr19	-,-,-,+,-	PTPRS,PTPRS,PTPRS,ZNRF4,PTPRS	1180,1180,1180,115741,1180
chrX:21673416-21673957	chrX	+	21673492	21673964	True	NM_015884,NM_153270	chrX,chrX	+,-	MBTPS2,KLHL34	183691,2534
chr2:238970274-238970953	chr2	+	238970310	238970900	True	NM_016510,NM_030768	chr2,chr2	+,-	SCLY,ILKAP	-796,141474
chr6:117993896-117994605	chr6	+	117993944	117994589	True	NM_020399,NM_138459	chr6,chr6	-,+	GOPC,NUS1	-70239,2027
chr5:137606033-137606604	chr5	+	137606569	137606658	True	NM_001496,NM_001135647	chr5,chr5	-,+	GFRA3,FAM53C	3650,66565
chr11:107730166-107730517	chr11	+	107730330	107730462	True	NM_017515,NM_017516	chr11,chr11	-,+	SLC35F2,RAB39	-416,68814
chr10:27265265-27265975	chr10	+	27265429	27265917	True	NR_026795,NM_001172303	chr10,chr10	-,+	NCRNA00202,MASTL	-34499,177835
chr3:137883579-137884493	chr3	+	137883842	137884100	True	NM_014154,NM_016216	chr3,chr3	+,-	ARMC8,DBR1	22047,9748
chr17:66288363-66288704	chr17	+	66288495	66288723	True	NM_004694,NM_001174166,NM_014960	chr17,chr17,chr17	-,-,+	SLC16A6,SLC16A6,ARSG	-1090,-1090,-33223
chr8:37300429-37301925	chr8	+	37300757	37301971	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	251329,303643
chr19:11547113-11547473	chr19	+	11547207	11547337	True	NM_001001329,NM_145045,NM_002743	chr19,chr19,chr19	+,-,+	PRKCSH,CCDC151,PRKCSH	-989,-1227,-989
chr16:4319734-4321200	chr16	+	4319838	4321182	True	NM_032575,NM_003223	chr16,chr16	+,-	GLIS2,TFAP4	61042,1869
chr14:77795054-77796481	chr14	+	77795199	77796403	True	NM_001513,NM_145870,NM_145871,NM_013382	chr14,chr14,chr14,chr14	+,+,+,-	GSTZ1,GSTZ1,GSTZ1,POMT2	-7544,-8020,-8020,-7974
chr7:99933699-99934030	chr7	+	99933734	99933812	True	NR_036570,NR_036569,NR_003613	chr7,chr7,chr7	+,+,-	PILRB,PILRB,PMS2P1	-97,-97,168
chr1:246728140-246728936	chr1	+	246728270	246728714	True	NM_152609,NM_001139459,NM_022366	chr1,chr1,chr1	+,+,-	CNST,CNST,TFB2M	924,924,901
chr2:87015451-87015651	chr2	+	87015456	87015590	True	NM_022780,NM_001768,NR_027353,NM_171827	chr2,chr2,chr2,chr2	+,-,-,-	RMND5A,CD8A,CD8A,CD8A	-68093,3297,3297,3297
chr3:50720224-50721387	chr3	+	50720438	50721434	True	NM_145071,NM_004947	chr3,chr3	-,+	CISH,DOCK3	-71176,-7817
chr5:107721456-107722870	chr5	+	107721806	107722594	True	NM_005246,NM_001163315	chr5,chr5	+,-	FER,FBXL17	360928,-4007
chr20:6108793-6109512	chr20	+	6108797	6109451	True	NM_001127458,NM_017671	chr20,chr20	+,-	CRLS1,FERMT1	-120957,-4606
chr4:96453950-96454469	chr4	+	96453953	96454214	True	NM_005390,NM_003728	chr4,chr4	+,-	PDHA2,UNC5C	307024,16204
chr15:69592107-69593433	chr15	+	69592221	69592810	True	NM_017705,NM_006305	chr15,chr15	+,-	PAQR5,ANP32A	-978,-478960
chr10:96305890-96306183	chr10	+	96305895	96306096	True	NM_022451,NM_018063	chr10,chr10	-,+	NOC3L,HELLS	-183212,-372
chr3:10156751-10157187	chr3	+	10156952	10157197	True	NM_173472,NM_018462,NM_001164839	chr3,chr3,chr3	-,+,-	C3orf24,C3orf10,C3orf24	-7037,135,-7037
chr17:60885014-60885329	chr17	+	60885131	60885377	True	NM_001100875,NM_152598,NR_036146	chr17,chr17,chr17	-,-,+	MARCH10,MARCH10,MIR548W	-1120,378,-86324
chr8:30242045-30242326	chr8	+	30242048	30242124	True	NM_001100916,NM_006867,NM_001008712,NM_001008711,NM_001008710	chr8,chr8,chr8,chr8,chr8	-,+,+,+,+	MBOAT4,RBPMS,RBPMS,RBPMS,RBPMS	-239848,-155,-155,-155,-155
chr12:104693467-104694355	chr12	+	104693713	104694365	True	NM_006166,NM_001008394	chr12,chr12	-,+	NFYB,EID3	-161673,3183
chr6:90539846-90541453	chr6	+	90539969	90541288	True	NM_001137667,NM_014611,NM_001137668,NM_012115	chr6,chr6,chr6,chr6	+,-,+,+	CASP8AP2,MDN1,CASP8AP2,CASP8AP2	-407,-10527,-407,-407
chr3:36976712-36977032	chr3	+	36976735	36976940	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	9665,57900
chr7:150450078-150450468	chr7	+	150450125	150450508	True	NM_001162367,NM_001101311	chr7,chr7	+,-	LOC100128542,TMEM176B	-3352,47163
chr22:39635643-39635882	chr22	+	39635749	39635931	True	NM_145731,NM_002608,NM_033016	chr22,chr22,chr22	+,-,-	SYNGR1,PDGFB,PDGFB	110022,5076,1033
chr8:17739197-17739622	chr8	+	17739413	17739637	True	NM_006197,NM_147203	chr8,chr8	+,-	PCM1,FGL1	40728,13326
chr8:38759370-38759821	chr8	+	38759408	38759799	True	NM_021623,NM_001024380	chr8,chr8	+,-	PLEKHA2,TM2D2	-706,94292
chr19:57352183-57352721	chr19	+	57352376	57352696	True	NM_006210,NM_001146327,NM_001146326,NM_001146185,NM_001146184,NM_001146187,NR_024059,NM_015363	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,+,-	PEG3,ZIM2,ZIM2,PEG3,PEG3,PEG3,MIMT1,ZIM2	-282,-279,-279,-282,-282,-282,-164,-279
chr14:45722452-45722678	chr14	+	45722463	45722697	True	NM_018353,NM_020937	chr14,chr14	-,+	MIS18BP1,FANCM	2,-117378
chr6:15020718-15022231	chr6	+	15020902	15022070	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	224456,641269
chr3:178784405-178786221	chr3	+	178784409	178785897	True	NM_152240,NM_022470,NM_006218	chr3,chr3,chr3	-,-,+	ZMAT3,ZMAT3,PIK3CA	3809,3809,80413
chr19:16652665-16652905	chr19	+	16652697	16652851	True	NM_006387,NM_032207	chr19,chr19	-,+	CHERP,C19orf44	462,-45543
chr2:158848801-158849673	chr2	+	158849021	158849717	True	NM_001111067,NM_001135098	chr2,chr2	-,+	ACVR1,UPP2	-116647,1973
chr7:102923413-102923892	chr7	+	102923664	102923899	True	NR_027768,NR_003561,NM_004279	chr7,chr7,chr7	-,-,+	DPY19L2P2,DPY19L2P2,PMPCB	-2751,-2905,13973
chr10:46968619-46969603	chr10	+	46968725	46969581	True	NM_014696,NM_181519,NM_031912	chr10,chr10,chr10	+,-,-	GPRIN2,SYT15,SYT15	23964,1070,1070
chr9:140483525-140483934	chr9	+	140483536	140483876	True	NM_152285,NM_138462	chr9,chr9	+,-	ARRDC1,ZMYND19	16219,1111
chr5:157876818-157878587	chr5	+	157876849	157878542	True	NM_014666,NM_173491	chr5,chr5	-,+	CLINT1,LSM11	-590666,-706150
chr8:103877021-103878282	chr8	+	103877031	103878178	True	NM_015878,NM_148174,NM_001695	chr8,chr8,chr8	-,-,+	AZIN1,AZIN1,ATP6V1C1	-634,-634,155069
chr3:50350762-50351328	chr3	+	50350763	50351371	True	NM_033158,NM_153282,NM_153283,NM_033159,NM_153281,NM_153285,NM_007312,NM_153215,NM_003773	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,-,-,-,+,-	HYAL2,HYAL1,HYAL1,HYAL1,HYAL1,HYAL1,HYAL1,C3orf45,HYAL2	8960,-9759,-9759,-9759,-951,-9759,-9759,-34296,8960
chr3:184453802-184454529	chr3	+	184453947	184454407	True	NM_001009921,NM_022149	chr3,chr3	+,-	VPS8,MAGEF1	75523,-24111
chr19:6424927-6425166	chr19	+	6424929	6425175	True	NR_037505,NM_139161,NM_003685,NM_173637	chr19,chr19,chr19,chr19	-,+,-,-	MIR3940,CRB3,KHSRP,SLC25A41	-8407,39084,-107,8665
chr21:46788085-46788664	chr21	+	46788116	46788526	True	NM_130445,NR_028082	chr21,chr21	+,-	COL18A1,NCRNA00175	36570,56479
chr14:52740024-52741642	chr14	+	52740061	52741659	True	NM_007361,NM_000953	chr14,chr14	-,+	NID2,PTGDR	-204115,-5694
chr16:32168755-32168999	chr16	+	32168765	32168855	True	NR_002827,NM_003414	chr16,chr16	-,+	HERC2P4,ZNF267	-4891,-283737
chr16:32168755-32168999	chr16	-	32781296	32781386	False	NM_016212	chr16	-	TP53TG3	-93243
chr16:32168755-32168999	chr16	+	33111661	33111751	False	NR_033866,NM_016212	chr16,chr16	-,+	LOC390705,TP53TG3	187001,93228
chr5:10249353-10249787	chr5	+	10249389	10249737	True	NM_199133,NM_012073	chr5,chr5	-,+	FAM173B,CCT5	327,544
chr13:114539026-114539972	chr13	+	114539026	114539999	True	NM_001143945,NM_001143946,NR_024609	chr13,chr13,chr13	-,-,+	GAS6,GAS6,FLJ44054	-9,-2312,46610
chr3:194091363-194091670	chr3	+	194091496	194091713	True	NM_130830,NM_001135057,NR_033929	chr3,chr3,chr3	-,-,+	LRRC15,LRRC15,FLJ34208	-1024,-1024,116155
chr6:109472040-109473679	chr6	+	109472097	109473338	True	NM_014454,NM_173830	chr6,chr6	-,+	SESN1,CEP57L1	-56389,-21648
chr7:50627215-50627823	chr7	+	50627434	50627678	True	NM_000790,NM_001082971,NR_033845	chr7,chr7,chr7	-,-,+	DDC,DDC,LOC100129427	1140,5526,-28029
chr6:137537948-137539608	chr6	+	137538189	137539597	True	NM_000416,NM_001008783	chr6,chr6	-,+	IFNGR1,SLC35D3	1021,-294838
chr12:120687515-120687932	chr12	+	120687525	120687959	True	NM_025157,NM_012240	chr12,chr12	-,+	PXN,SIRT4	48,52164
chr3:40434087-40434475	chr3	+	40434098	40434465	True	NM_001248,NR_033965	chr3,chr3	+,-	ENTPD3,FLJ33065	-5482,-82909
chr12:27675892-27676703	chr12	+	27676216	27676702	True	NM_003622,NM_001146221,NM_001198916,NM_001198915,NM_177444	chr12,chr12,chr12,chr12,chr12	+,-,+,+,+	PPFIBP1,LOC100287284,PPFIBP1,PPFIBP1,PPFIBP1	342,247557,342,342,342
chr11:86085936-86087543	chr11	+	86086155	86087178	True	NM_001014811,NM_001156474,NM_021827	chr11,chr11,chr11	-,+,+	ME3,CCDC81,CCDC81	296119,-428,-428
chr19:41902714-41903146	chr19	+	41902788	41903014	True	NM_020158,NM_000709,NM_001164783	chr19,chr19,chr19	-,+,+	EXOSC5,BCKDHA,BCKDHA	292,679,679
chr11:58881255-58881570	chr11	+	58881261	58881571	True	NM_001142704,NR_033853,NM_001142703,NM_198947	chr11,chr11,chr11,chr11	+,-,+,+	FAM111B,LOC283194,FAM111B,FAM111B	-6654,-55336,-6654,-6654
chr19:3933142-3933420	chr19	+	3933171	3933469	True	NM_170678,NR_030367	chr19,chr19	+,-	ITGB1BP3,MIR637	-121,28091
chr11:73867870-73869689	chr11	+	73868023	73869074	True	NM_015531,NM_016147	chr11,chr11	-,+	C2CD3,PPME1	13052,13293
chr14:77362222-77363034	chr14	+	77362226	77362893	True	NM_015305,NM_194287	chr14,chr14	-,+	ANGEL1,C14orf166B	-82943,-69553
chr7:150925609-150926022	chr7	+	150925776	150926029	True	NM_007189,NM_019015,NR_030407,NM_005692	chr7,chr7,chr7,chr7	-,+,+,-	ABCF2,CHPF2,MIR671,ABCF2	-1459,3555,9477,-1459
chr12:13105969-13106266	chr12	+	13105969	13106114	True	NM_018654,NR_030345	chr12,chr12	-,+	GPRC5D,MIR614	-2651,-37266
chr19:50627864-50628579	chr19	+	50628380	50628444	True	NR_024223,NR_024224,NR_024225,NR_024226,NR_024227,NR_024228,NR_024229,NR_027257,NR_024215,NR_024214,NR_024231,NR_024230,NR_024242	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,+,-,-,-,-,-	SNAR-A5,SNAR-A7,SNAR-A11,SNAR-A9,SNAR-A6,SNAR-A8,SNAR-A10,FLJ26850,SNAR-A4,SNAR-A3,SNAR-B1,SNAR-B2,SNAR-A14	-1929,-1929,-1929,-1929,-1929,-1929,-1929,-74494,-1929,-1929,8727,8727,-1929
chr19:50627864-50628579	chr19	+	50597791	50597853	False	NR_024223,NR_024224,NR_024225,NR_024226,NR_024227,NR_024228,NR_024229,NR_027257,NR_024215,NR_024214,NR_024242	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,+,-,-,-	SNAR-A5,SNAR-A7,SNAR-A11,SNAR-A9,SNAR-A6,SNAR-A8,SNAR-A10,FLJ26850,SNAR-A4,SNAR-A3,SNAR-A14	-1925,-1925,-1925,-1925,-1925,-1925,-1925,-43906,-1925,-1925,-1925
chr19:50627864-50628579	chr19	+	50633715	50633779	False	NR_024223,NR_024224,NR_024225,NR_024226,NR_024227,NR_024228,NR_024229,NM_001145809,NR_024215,NR_024214,NR_024231,NR_024230,NR_024242,NR_024243	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,+,-,-,-,-,-,-	SNAR-A5,SNAR-A7,SNAR-A11,SNAR-A9,SNAR-A6,SNAR-A8,SNAR-A10,MYH14,SNAR-A4,SNAR-A3,SNAR-B1,SNAR-B2,SNAR-A14,SNAR-D	-1936,-1936,-1936,-1936,-1936,-1936,-1936,73105,-1936,-1936,3392,3392,-1936,9848
chr17:74738743-74739789	chr17	+	74738944	74739693	True	NR_036608,NM_003016,NM_024311,NR_030366,NM_001195427	chr17,chr17,chr17,chr17,chr17	-,-,+,-,-	SRSF2,SRSF2,MFSD11,MIR636,SRSF2	-5451,-5451,-5212,-6314,-5451
chr3:113212444-113213214	chr3	+	113212522	113213145	True	NM_144718,NM_017699	chr3,chr3	-,+	SPICE1,SIDT1	20942,38072
chr18:13220405-13221892	chr18	+	13220410	13221908	True	NM_002828,NM_181482,NM_181481	chr18,chr18,chr18	-,+,+	PTPN2,C18orf1,C18orf1	-336076,-1675,-1675
chr17:43234888-43236200	chr17	+	43235486	43236065	True	NM_144608,NM_133373	chr17,chr17	+,-	HEXIM2,PLCD3	2198,-25595
chr11:76172695-76174387	chr11	+	76173518	76174030	True	NM_020193,NM_004705	chr11,chr11	+,-	C11orf30,PRKRIR	-17508,-81638
chr1:53681887-53682483	chr1	+	53681991	53682393	True	NM_000098,NM_017887	chr1,chr1	+,-	CPT2,C1orf123	-19942,3946
chr2:220461132-220462160	chr2	+	220461581	220462095	True	NM_001173408,NM_052902	chr2,chr2	-,+	OBSL1,STK11IP	-25313,500
chr10:72643770-72644329	chr10	+	72643775	72644206	True	NM_000281,NM_003901	chr10,chr10	-,+	PCBD1,SGPL1	4398,-68122
chrX:103401418-103401636	chrX	+	103401478	103401680	True	NM_001012755,NM_207318	chrX,chrX	-,+	MCART6,FAM199X	78,9620
chr12:56698764-56700196	chr12	+	56698986	56699198	True	NM_004077,NM_016584	chr12,chr12	-,+	CS,IL23A	-4811,33464
chr22:32760678-32762549	chr22	+	32761000	32762004	True	NR_002596,NR_001450,NM_001098535	chr22,chr22,chr22	-,-,+	RFPL3S,RFPL3S,RFPL3	5109,5018,-7198
chr9:100690601-100692466	chr9	+	100690730	100692336	True	NM_016481,NM_006401,NM_197978	chr9,chr9,chr9	-,+,-	C9orf156,ANP32B,HEMGN	-5878,53152,8246
chrX:1456241-1457783	chrY	+	1406277	1407529	False	NM_001636,NM_002183	chrY,chrY	-,+	SLC25A6,IL3RA	53560,-819
chrX:1456241-1457783	chrX	+	1456277	1457529	True	NM_001636,NM_002183	chrX,chrX	-,+	SLC25A6,IL3RA	53560,-819
chr3:45938979-45939350	chr3	+	45938990	45939322	True	NM_020347,NR_036525	chr3,chr3	-,+	LZTFL1,CCR9	-55369,-11045
chr12:57324473-57324941	chr12	+	57324478	57324741	True	NM_148897,NM_007264	chr12,chr12	-,+	SDR9C7,GPR182	3499,63613
chr6:24773667-24774518	chr6	+	24773807	24774414	True	NM_030939,NM_015895	chr6,chr6	-,+	C6orf62,GMNN	-54404,749
chr15:79102064-79102602	chr15	+	79102155	79102321	True	NR_036495,NM_014272	chr15,chr15	+,-	LOC646938,ADAMTS7	-57827,1502
chr19:11374993-11375235	chr19	+	11375047	11375193	True	NM_020812,NM_018687	chr19,chr19	-,+	DOCK6,LOC55908	-1890,-24803
chr4:55525294-55525675	chr4	+	55525388	55525692	True	NM_002253,NM_000222,NM_001093772	chr4,chr4,chr4	-,+,+	KDR,KIT,KIT	466120,-1344,-1344
chr10:88727567-88728126	chr10	+	88727671	88727905	True	NM_003087,NM_024756,NM_133447,NM_006829	chr10,chr10,chr10,chr10	+,-,+,+	SNCG,MMRN2,AGAP11,C10orf116	-9434,-10246,2592,282
chr19:10625764-10626450	chr19	+	10625834	10625911	True	NM_001166215,NM_030760,NM_032885	chr19,chr19,chr19	-,-,+	S1PR5,S1PR5,ATG4D	2810,2268,28735
chr17:74099871-74100330	chr17	+	74099969	74100311	True	NM_001013839,NM_015219,NM_001145297,NM_180990,NM_001145299,NM_001145298,NR_028133	chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,+,-,-,-	EXOC7,EXOC7,EXOC7,ZACN,EXOC7,EXOC7,EXOC7	-101,-101,-101,-24757,-101,-101,-317
chr4:48026745-48027023	chr4	+	48026748	48027054	True	NM_000087,NM_207330	chr4,chr4	-,+	CNGA1,NIPAL1	-11787,-8008
chrX:133780073-133780301	chrX	+	133780132	133780321	True	NM_021796,NM_001170780	chrX,chrX	-,+	PLAC1,FAM122C	12247,150121
chr7:95019352-95021304	chr7	+	95019390	95021053	True	NM_145872,NM_000940	chr7,chr7	+,-	ASB4,PON3	94159,4684
chrX:47441629-47441884	chrX	+	47441705	47441879	True	NM_006950,NM_003254	chrX,chrX	-,+	SYN1,TIMP1	37427,-66
chr7:98468795-98469966	chr7	+	98468808	98469154	True	NM_001134450,NM_001134451,NM_152913,NM_003496	chr7,chr7,chr7,chr7	-,-,-,+	TMEM130,TMEM130,TMEM130,TRRAP	-1135,-1135,-1135,6958
chr1:46924670-46925248	chr1	+	46924706	46925128	True	NM_147192,NM_001097611	chr1,chr1	+,-	DMBX1,KNCN	47539,91809
chr11:61937129-61938114	chr11	+	61937209	61937966	True	NM_006552,NM_206998	chr11,chr11	+,-	SCGB1D1,SCGB1D4	19743,128621
chr9:111624033-111624710	chr9	+	111624196	111624748	True	NM_006687,NM_006686	chr9,chr9	+,-	ACTL7A,ACTL7B	-2,-5921
chr19:34111105-34112088	chr19	+	34111178	34111957	True	NM_001166057,NM_001127895,NM_001127896	chr19,chr19,chr19	-,+,+	PEPD,CHST8,CHST8	-98379,903,915
chr1:7843616-7843941	chr1	+	7843616	7843952	True	NM_006786,NM_016831	chr1,chr1	-,+	UTS2,PER3	69202,810
chr7:53740029-53741686	chr7	+	53740414	53741728	True	NM_182595,NR_004422	chr7,chr7	+,-	POM121L12,HPVC1	-637116,528441
chr6:88108763-88109800	chr6	+	88109002	88109813	True	NR_026784,NM_001031743,NM_198568	chr6,chr6,chr6	+,+,-	C6orf164,C6orf165,GJB7	-2213,7876,-70006
chr3:125094311-125094661	chr3	+	125094384	125094706	True	NM_021964,NR_024250	chr3,chr3	-,+	ZNF148,LOC100125556	-186,540737
chr22:37416086-37416411	chr22	+	37416212	37416396	True	NM_001013436,NR_024038,NM_021126,NM_003312,NM_001130517	chr22,chr22,chr22,chr22,chr22	+,+,+,-,+	MPST,MPST,MPST,TST,MPST	-568,-568,-568,-721,-568
chrX:135725733-135726436	chrX	+	135725751	135726235	True	NM_004840,NM_000074	chrX,chrX	-,+	ARHGEF6,CD40LG	137331,4100
chr14:103388359-103388760	chr14	+	103388451	103388701	True	NM_006035,NM_030943	chr14,chr14	-,+	CDC42BPB,AMN	135091,291
chr3:49395939-49396154	chr3	+	49395957	49396168	True	NM_201397,NM_022171,NM_000581	chr3,chr3,chr3	-,+,-	GPX1,TCTA,GPX1	-166,53470,-166
chr6:44127516-44128074	chr6	+	44127908	44127994	True	NM_007058,NM_032111	chr6,chr6	+,-	CAPN11,MRPL14	-1425,-32717
chr17:6918910-6919971	chr17	+	6919148	6919858	True	NR_030178,NM_001142799,NM_001004333,NM_001142798,NM_174893,NR_037715,NR_037716,NR_037717,NR_029712,NM_181844	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,+,+,+,+,+,+,-,+	MIR497,C17orf49,RNASEK,C17orf49,C17orf49,RNASEK,RNASEK,RNASEK-C17ORF49,MIR195,BCL6B	1533,-1143,-3463,-1143,-1143,-3463,-3463,-3463,1212,6510
chr12:10338225-10339793	chr12	+	10338808	10339525	True	NM_153022,NM_002543	chr12,chr12	+,-	C12orf59,OLR1	-7312,-14018
chr22:19007299-19008915	chr22	+	19007318	19008120	True	NR_024157,NR_026651,NR_024159	chr22,chr22,chr22	-,+,+	DGCR11,DGCR10,DGCR9	27828,2016,-2022
chr1:2456273-2457115	chr1	+	2456382	2457154	True	NM_018216,NM_003820,NM_001010926	chr1,chr1,chr1	-,+,-	PANK4,TNFRSF14,HES5	931,30650,4580
chr7:27196528-27196757	chr7	+	27196681	27196781	True	NM_152739,NR_002795,NM_024014,NM_006896	chr7,chr7,chr7,chr7	-,+,-,-	HOXA9,HOXA11-AS1,HOXA6,HOXA7	8418,28245,-9313,-385
chr11:1329677-1329960	chr11	+	1329784	1329920	True	NM_019009,NR_029409	chr11,chr11	-,+	TOLLIP,LOC255512	1022,1017
chr3:30941129-30941644	chr3	+	30941182	30941688	True	NM_207359,NM_003242	chr3,chr3	-,+	GADL1,TGFBR2	-5029,-293239
chr1:241874797-241875514	chr1	+	241874796	241875497	True	NM_014322,NM_144625	chr1,chr1	-,+	OPN3,WDR64	-71095,-59267
chr12:42541687-42543631	chr12	+	42541888	42543000	True	NM_173601,NM_001099650,NM_201438	chr12,chr12,chr12	-,-,+	GXYLT1,GXYLT1,PPHLN1	-3215,-3215,176946
chrY:26717182-26719072	chrY	+	26717499	26718888	True	NR_002178,NM_020364,NR_002177,NR_001525	chrY,chrY,chrY,chrY	+,-,+,+	TTTY4B,DAZ3,TTTY4C,TTTY4	-1201,240803,-1201,-1201
chrY:26717182-26719072	chrY	+	25083752	25085141	False	NR_002178,NR_002177,NM_004081,NR_001525	chrY,chrY,chrY,chrY	+,+,-,+	TTTY4B,TTTY4C,DAZ1,TTTY4	-1201,-1201,260150,-1201
chrY:26717182-26719072	chrY	-	27243499	27244888	False	NR_002178,NR_002177,NM_001005786,NR_001525	chrY,chrY,chrY,chrY	-,-,+,-	TTTY4B,TTTY4C,DAZ2,TTTY4	1201,1201,-263562,1201
chr9:26947537-26948557	chr9	+	26947542	26948243	True	NM_001099224,NM_001031689,NM_025103,NM_001099223,NM_001099222	chr9,chr9,chr9,chr9,chr9	+,-,+,+,+	IFT74,PLAA,IFT74,IFT74,IFT74	8127,-74,8127,-556,-283
chr6:130337173-130337512	chr6	+	130337172	130337552	True	NM_001007102,NM_032438,NM_001010876	chr6,chr6,chr6	+,+,-	L3MBTL3,L3MBTL3,C6orf191	2175,2175,-154756
chr10:25298021-25299251	chr10	+	25298195	25298549	True	NM_024838,NM_145010	chr10,chr10	+,-	THNSL1,ENKUR	6958,6531
chr19:42774381-42776095	chr19	+	42774584	42775877	True	NM_006494,NM_015125	chr19,chr19	-,+	ERF,CIC	-15275,12939
chr15:28580887-28581829	chr15	+	28581049	28581682	True	NM_004667,NR_033351	chr15,chr15	-,+	HERC2,GOLGA8F	-13754,42101
chr15:28580887-28581829	chr15	-	28820237	28820870	False	NR_036443,NR_033351	chr15,chr15	+,-	HERC2P9,GOLGA8F	78717,-42094
chr15:28580887-28581829	chr15	+	20725168	20725800	False	NR_036432,NR_027411	chr15,chr15	-,+	HERC2P3,GOLGA8C	-13735,41873
chr15:28580887-28581829	chr15	+	23680237	23680294	False	NM_005664,NM_019066	chr15,chr15	+,-	MKRN3,MAGEL2	130159,212756
chr15:28580887-28581829	chr15	+	23391962	23392594	False	NR_036470,NR_002824	chr15,chr15	+,-	HERC2P7,HERC2P2	-1293,-13703
chr8:144450613-144450827	chr8	+	144450666	144450840	True	NR_026785,NM_052924	chr8,chr8	-,+	C8orf51,RHPN1	15,184
chr14:25100458-25101226	chr14	+	25100637	25101164	True	NM_015299,NM_004131	chr14,chr14	+,-	KHNYN,GZMB	-201547,2319
chr10:5405965-5407063	chr10	+	5406119	5407072	True	NM_001171864,NM_053049	chr10,chr10	-,+	TUBAL3,UCN3	39771,-9
chr11:65768865-65769144	chr11	+	65768976	65769182	True	NM_003860,NM_001143985,NM_032325	chr11,chr11,chr11	+,+,-	BANF1,BANF1,EIF1AD	367,367,446
chr3:58649551-58651132	chr3	+	58649634	58650674	True	NM_138805,NM_153331	chr3,chr3	-,+	FAM3D,KCTD6	1937,-165593
chr11:33741022-33741575	chr11	+	33741224	33741606	True	NM_001127223,NM_001127227,NM_001127226,NM_001127225,NM_012194	chr11,chr11,chr11,chr11,chr11	-,-,-,-,+	CD59,CD59,CD59,CD59,C11orf41	2717,2942,2717,2717,-177398
chr1:27816821-27817082	chr1	+	27816876	27817104	True	NM_005281,NM_001201404,NM_006990	chr1,chr1,chr1	+,-,-	GPR3,WASF2,WASF2	-97775,-198,-198
chr20:45318482-45318755	chr20	+	45318550	45318800	True	NM_030777,NM_001011554,NM_001193340,NM_033550	chr20,chr20,chr20,chr20	+,-,-,-	SLC2A10,SLC13A3,SLC13A3,TP53RK	19478,-5426,-5426,-274
chr13:49993636-49993902	chr13	+	49993760	49993923	True	NM_031915,NM_030925	chr13,chr13	+,-	SETDB2,CAB39L	24505,-18025
chr2:86357906-86359495	chr2	+	86357907	86359537	True	NM_015425,NR_004378	chr2,chr2	-,+	POLR1A,SNORD94	-24629,3455
chr9:114361656-114361931	chr9	+	114361704	114361909	True	NM_001015882,NM_012212,NM_001146109,NM_001146108	chr9,chr9,chr9,chr9	+,-,-,-	DNAJC25,PTGR1,PTGR1,PTGR1	31722,-1,276,276
chr6:139455817-139456040	chr6	+	139455890	139455990	True	NM_016217,NM_031922	chr6,chr6	+,-	HECA,REPS1	258,-146492
chr16:1993621-1994502	chr16	+	1993664	1994354	True	NM_016332,NM_004548	chr16,chr16	-,+	SEPX1,NDUFB10	-370,15162
chr17:39645399-39645985	chr17	+	39645531	39645759	True	NM_005801,NM_003771,NM_002280	chr17,chr17,chr17	+,-,-	EIF1,KRT36,KRT35	199367,407,-8139
chr13:77868945-77869360	chr13	+	77868955	77869183	True	NM_015057,NM_001160706	chr13,chr13	-,+	MYCBP2,SCEL	32044,240625
chr6:116442221-116442557	chr6	+	116442528	116442600	True	NM_152729,NM_000493	chr6,chr6	+,-	NT5DC1,COL10A1	-20580,4746
chr2:676454-676695	chr2	+	676514	676584	True	NM_018968,NM_152834	chr2,chr2	+,-	SNTG2,TMEM18	269969,905
chr5:172260232-172261196	chr5	+	172260275	172261127	True	NM_004417,NM_001031711	chr5,chr5	-,+	DUSP1,ERGIC1	-62072,95
chr16:69421847-69422684	chr16	+	69422129	69422675	True	NM_030579,NM_005652	chr16,chr16	+,-	CYB5B,TERF2	35822,-2255
chr10:134258600-134259509	chr10	+	134258724	134259340	True	NM_173541,NM_173575	chr10,chr10	+,-	C10orf91,STK32C	-61,-137247
chr3:122131466-122131704	chr3	+	122131494	122131709	True	NM_014367,NM_019069	chr3,chr3	+,-	FAM162A,WDR5B	-28522,3224
chr4:71328655-71330565	chr4	+	71328733	71330267	True	NM_144646,NM_001145007,NM_152291	chr4,chr4,chr4	-,+,+	IGJ,MUC7,MUC7	202131,7407,7566
chr15:65805709-65806035	chr15	+	65805836	65806004	True	NM_130434,NM_197960,NM_197961,NM_017743,NM_016395	chr15,chr15,chr15,chr15,chr15	-,-,-,-,+	DPP8,DPP8,DPP8,DPP8,PTPLAD1	4089,3663,4089,4089,16822
chr14:77496277-77496939	chr14	+	77496303	77496990	True	NM_024496,NM_033426	chr14,chr14	-,+	IRF2BPL,KIAA1737	-1269,67587
chr18:10472018-10472961	chr18	+	10472079	10472885	True	NM_153000,NM_022068	chr18,chr18	+,-	APCDD1,FAM38B	-17505,675926
chr15:62349236-62350408	chr15	+	62349652	62350389	True	NM_017684,NM_001018088,NM_018080,NM_020821,NM_207322	chr15,chr15,chr15,chr15,chr15	-,-,-,-,+	VPS13C,VPS13C,VPS13C,VPS13C,C2CD4A	2325,2325,2325,2325,8786
chr6:27730000-27730426	chr6	+	27730009	27730473	True	NM_003509,NM_003519	chr6,chr6	+,-	HIST1H2AI,HIST1H2BL	45503,45286
chrX:37708384-37709436	chrX	+	37708668	37709474	True	NM_000397,NM_006520	chrX,chrX	+,-	CYBB,DYNLT3	-69450,-1779
chr14:94545676-94546986	chr14	+	94545910	94546966	True	NM_020414,NM_206949,NM_145249	chr14,chr14,chr14	-,+,+	DDX24,IFI27L1,IFI27L1	642,672,672
chr14:103673818-103674047	chr14	+	103673922	103674050	True	NR_033938,NM_006291	chr14,chr14	-,+	LOC100131366,TNFAIP2	-18557,-81309
chr1:196548714-196550613	chr1	+	196549018	196550630	True	NM_198503,NM_001014975	chr1,chr1	-,+	KCNT2,CFH	26923,70377
chr16:71842179-71842406	chr16	+	71842208	71842398	True	NM_001128,NM_001137675,NM_001030007	chr16,chr16,chr16	-,+,-	AP1G1,ATXN1L,AP1G1	628,37500,628
chr8:136469019-136469470	chr8	+	136469024	136469250	True	NR_029599,NM_006558	chr8,chr8	-,+	MIR30D,KHDRBS3	-651836,465
chr18:9611931-9613114	chr18	+	9612027	9613134	True	NM_006868,NM_005134,NM_001042388	chr18,chr18,chr18	+,-,-	RAB31,PPP4R1,PPP4R1	95093,1516,1516
chr9:84545015-84545982	chr9	+	84545172	84546030	True	NM_001145197,NM_005077	chr9,chr9	+,-	FAM75D4,TLE1	-1880,-241576
chr9:84545015-84545982	chr9	+	84560264	84561122	False	NM_005077,NM_207416	chr9,chr9	-,+	TLE1,FAM75D3	-256668,-1900
chr2:209010496-209010817	chr2	+	209010603	209010865	True	NM_005210,NM_001178000	chr2,chr2	-,+	CRYGB,PIKFYVE	62,120125
chr12:51476893-51477120	chr12	+	51476916	51477095	True	NM_030809,NM_015416	chr12,chr12	-,+	CSRNP2,LETMD1	288,-34883
chr15:31126193-31126600	chr15	+	31126424	31126538	True	NM_017762,NM_001146095	chr15,chr15	-,+	MTMR10,FAN1	157321,69516
chr19:35939863-35940216	chr19	+	35940015	35940237	True	NM_005306,NM_207392	chr19,chr19	+,-	FFAR2,KRTDAP	379,41169
chr8:29383362-29385217	chr8	+	29383414	29385104	True	NR_024473,NM_001394	chr8,chr8	+,-	LOC286135,DUSP4	393924,-175147
chr15:91496750-91498134	chr15	+	91496811	91498111	True	NM_033544,NM_001017919,NM_198527	chr15,chr15,chr15	+,+,-	RCCD1,RCCD1,HDDC3	-6,-6,-21037
chr22:36635753-36636872	chr22	+	36635780	36636653	True	NM_030882,NM_145637,NM_001136540	chr22,chr22,chr22	-,-,+	APOL2,APOL2,APOL1	-91,18,12463
chr7:50858573-50859725	chr7	+	50858584	50859752	True	NM_001001555,NR_033845	chr7,chr7	-,+	GRB10,LOC100129427	1457,-259179
chr19:4338930-4339132	chr19	+	4338929	4339032	True	NM_001159846,NM_001013841,NM_032868,NM_017720	chr19,chr19,chr19,chr19	+,-,+,-	MPND,STAP2,MPND,STAP2	4491,-82,4491,-82
chrX:135065609-135067448	chrX	+	135065701	135067395	True	NM_173470,NM_006359,NM_001042537,NM_001177651	chrX,chrX,chrX,chrX	-,+,+,+	MMGT1,SLC9A6,SLC9A6,SLC9A6	-9567,190,190,187
chr7:99715591-99716515	chr7	+	99716308	99716530	True	NM_139315,NM_152755,NM_001190415,NR_033792,NM_203397,NM_005641	chr7,chr7,chr7,chr7,chr7,chr7	-,+,-,-,+,-	TAF6,CNPY4,TAF6,TAF6,MBLAC1,TAF6	541,734,1001,515,7789,515
chr11:47787788-47788051	chr11	+	47787928	47788076	True	NM_001164379,NM_015308	chr11,chr11	+,-	FAM180B,FNBP4	-179753,967
chr22:42228633-42228887	chr22	+	42228797	42228921	True	NM_004599,NM_052945	chr22,chr22	+,-	SREBF2,TNFRSF13C	184,93950
chr3:180371889-180373103	chr3	+	180371889	180373071	True	NM_133462,NM_181426	chr3,chr3	+,-	TTC14,CCDC39	-52032,24265
chr3:167177155-167178543	chr3	+	167177382	167178515	True	NM_006217,NM_001122752	chr3,chr3	-,+	SERPINI2,SERPINI1	13362,274916
chr3:96336198-96336981	chr5	+	79946743	79946799	True	NM_001190470,NM_002439,NM_000791	chr5,chr5,chr5	-,+,-	MTRNR2L2,MSH3,DHFR	111,3494,4057
chr2:201644966-201646380	chr2	+	201645162	201646334	True	NM_014670,NR_037886	chr2,chr2	+,-	BZW1,LOC100507140	30312,-45262
chr5:139235-139700	chr5	+	139253	139465	True	NM_052909,NM_145265	chr5,chr5	+,-	PLEKHG4B,CCDC127	907,78882
chr14:69609122-69610352	chr14	+	69609267	69610345	True	NM_003861,NM_001193360	chr14,chr14	-,+	DCAF5,EXD2	9619,47848
chr4:47823174-47824923	chr4	+	47823715	47824761	True	NM_006587,NM_207330	chr4,chr4	-,+	CORIN,NIPAL1	15349,194029
chr21:43343937-43344422	chr21	+	43343952	43344420	True	NM_199050,NR_027273	chr21,chr21	-,+	C2CD2,C21orf121	2429,97692
chr9:137533110-137533386	chr9	+	137533114	137533220	True	NR_037469,NM_000093	chr9,chr9	-,+	MIR3689B,COL5A1	208948,431
chr12:133760984-133762207	chr12	+	133761113	133762255	True	NM_001191054,NM_152943,NM_003415,NM_001165885,NM_001165884,NM_001165887,NM_001165886,NM_001165881,NM_001165883	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,+,+,+,+,+,+	LOC647589,ZNF268,ZNF268,ZNF268,ZNF268,ZNF268,ZNF268,ZNF268,ZNF268	50217,-3169,-3169,-3169,-3169,-3169,-3169,-3104,-3169
chr9:977675-977947	chr9	+	977675	977947	True	NM_021240,NM_152569	chr9,chr9	+,-	DMRT3,C9orf66	-762,-761782
chr7:19155178-19156124	chr7	+	19155379	19156014	True	NM_001204148,NM_000474	chr7,chr7	+,-	HDAC9,TWIST1	-606531,1331
chr6:41753263-41753941	chr6	+	41753385	41753813	True	NM_001134493,NM_013397,NM_006653	chr6,chr6,chr6	+,+,-	TOMM6,PRICKLE4,FRS3	1367,-4936,-5755
chr3:48633971-48635398	chr3	+	48634350	48635392	True	NM_000094,NM_033629	chr3,chr3	-,+	COL7A1,TREX1	-1757,-127172
chr17:76228827-76229514	chr17	+	76228928	76229499	True	NR_002219,NM_001204210,NM_001204211,NM_001204212	chr17,chr17,chr17,chr17	-,+,+,+	EPR1,TMEM235,TMEM235,TMEM235	-8145,-1588,-1588,-1588
chr17:33918350-33919806	chr17	+	33918597	33919309	True	NM_001282,NM_001030006,NM_000286	chr17,chr17,chr17	+,+,-	AP2B1,AP2B1,PEX12	-4380,-4380,-12941
chr6:159422554-159422821	chr6	+	159422626	159422727	True	NM_031924,NM_001195032	chr6,chr6	-,+	RSPH3,C6orf99	-1428,-113059
chr3:19973232-19974499	chr3	+	19973339	19974275	True	NM_144715,NM_004162	chr3,chr3	-,+	EFHB,RAB5A	1481,14296
chr7:150785781-150786042	chr7	+	150785990	150786064	True	NM_031434,NM_031946,NM_001042535,NM_001136044,NM_033015,NM_006712	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,-,-,-	TMUB1,AGAP3,AGAP3,TMUB1,FASTK,FASTK	-5577,-2215,-2215,-5370,-8039,-8039
chr12:51567372-51568047	chr12	+	51567754	51568072	True	NM_005653,NM_001136264,NM_001173453,NM_001173452	chr12,chr12,chr12,chr12	-,+,-,-	TFCP2,DAZAP2,TFCP2,TFCP2	-828,64435,-828,-828
chr2:114202980-114204726	chr2	+	114203122	114203695	True	NR_024005,NM_172003	chr2,chr2	-,+	DDX11L2,CBWD2	155519,-7912
chr2:114202980-114204726	chr9	-	171031	171590	False	NM_001145356,NM_001145355,NM_203447,NM_018491	chr9,chr9,chr9,chr9	-,-,+,-	CBWD1,CBWD1,DOCK8,CBWD1	7549,7549,43274,7549
chr17:15248131-15249862	chr17	+	15248197	15249897	True	NM_031898,NR_033371	chr17,chr17	-,+	TEKT3,CDRT7	-3239,-313956
chr19:5850435-5851120	chr19	+	5851093	5851157	True	NM_001097641,NM_001097640,NM_004558,NM_001097639,NM_000149	chr19,chr19,chr19,chr19,chr19	-,-,+,-,-	FUT3,FUT3,NRTN,FUT3,FUT3	378,378,-27326,378,378
chr16:67539171-67540418	chr16	+	67539263	67540385	True	NM_001138,NM_024519	chr16,chr16	-,+	AGRP,FAM65A	-21547,22331
chr5:170214617-170215776	chr5	+	170214664	170215817	True	NM_014211,NM_004137	chr5,chr5	+,-	GABRP,KCNMB1	-3993,-398026
chr1:157063947-157064559	chr1	+	157063961	157064414	True	NM_001004341,NR_001560	chr1,chr1	-,+	ETV3L,CYCSP52	5243,33739
chr17:5343209-5343581	chr17	+	5343288	5343623	True	NR_027685,NM_001212	chr17,chr17	+,-	RPAIN,C1QBP	-20378,-817
chr8:146076016-146076488	chr8	+	146076050	146076282	True	NM_001081003,NM_001081004,NM_014066,NM_003416	chr8,chr8,chr8,chr8	-,-,-,+	COMMD5,COMMD5,COMMD5,ZNF7	2700,2219,2220,-23198
chr2:39008064-39008702	chr2	+	39008456	39008750	True	NM_001195446,NM_024775	chr2,chr2	-,+	SRSF7,GEMIN6	-29820,-3186
chr3:56795816-56796296	chr3	+	56795822	56796344	True	NM_001128616,NR_024460	chr3,chr3	-,+	ARHGEF3,CCDC66	13451,-204689
chr7:75541754-75543103	chr7	+	75541997	75542425	True	NM_031925,NM_000941	chr7,chr7	-,+	TMEM120A,POR	81617,1994
chr16:30346774-30347076	chr16	+	30347052	30347116	True	NR_002453,NM_013292	chr16,chr16	-,+	LOC595101,MYLPF	-357,39006
chr15:73666191-73666538	chr15	+	73666279	73666537	True	NM_001042367,NM_005477	chr15,chr15	+,-	C15orf60,HCN4	68961,-4674
chr1:207643456-207644464	chr1	+	207643515	207644485	True	NR_029832,NM_001877	chr1,chr1	-,+	MIR29C,CR2	330849,-15926
chr9:74625623-74626481	chr9	+	74625729	74626225	True	NM_182505,NM_001128618	chr9,chr9	+,-	C9orf85,C9orf57	-99357,49354
chr14:69692953-69693184	chr14	+	69693032	69693167	True	NM_003861,NM_001168368	chr14,chr14	-,+	DCAF5,GALNTL1	-73118,33513
chr2:219845852-219846121	chr2	+	219845896	219846055	True	NR_015390,NM_017521,NR_024385	chr2,chr2,chr2	+,-,+	LOC151300,FEV,LOC151300	-4941,4379,-4941
chr16:14724109-14724514	chr16	+	14724273	14724487	True	NM_002582,NM_001134477,NM_016561	chr16,chr16,chr16	-,-,+	PARN,PARN,BFAR	-149,-153,2180
chr2:26915731-26915963	chr2	+	26915736	26915974	True	NM_002246,NM_001029881	chr2,chr2	+,-	KCNK3,CIB4	-206,-51525
chr2:229422726-229424399	chr2	+	229422782	229424102	True	NM_178821,NM_030623	chr2,chr2	+,-	WDR69,SPHKAP	-686519,-376421
chr19:50369962-50370329	chr19	+	50369965	50370271	True	NM_001168222,NM_007254	chr19,chr19	+,-	TBC1D17,PNKP	10410,601
chr15:40225903-40226209	chr15	+	40225990	40226139	True	NM_007223,NM_001013703	chr15,chr15	-,+	GPR176,EIF2AK4	-12897,207
chr1:113224088-113224810	chr1	+	113224123	113224369	True	NM_001130079,NM_020963,NM_001042679	chr1,chr1,chr1	+,+,-	MOV10,MOV10,RHOC	-7127,-7127,25369
chr1:26394076-26394387	chr1	+	26394084	26394384	True	NR_026685,NM_032588	chr1,chr1	+,-	PDIK1L,TRIM63	43271,37
chr9:36386890-36387815	chr9	+	36387231	36387868	True	NM_022781,NM_014791	chr9,chr9	-,+	RNF38,MELK	12489,185036
chr1:44172422-44172954	chr1	+	44172463	44172985	True	NM_174963,NM_174964,NM_174965,NM_174966,NM_174967,NM_174968,NM_174969,NM_174971,NM_174970,NR_033827,NM_006279	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,+,+,+,+,-,+	ST3GAL3,ST3GAL3,ST3GAL3,ST3GAL3,ST3GAL3,ST3GAL3,ST3GAL3,ST3GAL3,ST3GAL3,LOC100132774,ST3GAL3	232,232,232,232,232,232,232,232,232,77,232
chr7:99173014-99174535	chr7	+	99173361	99174141	True	NM_145111,NM_001085368	chr7,chr7	-,+	FAM200A,ZNF655	-23604,-16965
chr1:13033512-13033868	chr1	+	13033638	13033774	True	NM_001100631,NM_001010889	chr1,chr1	+,-	PRAMEF22,PRAMEF6	1768,-26232
chr1:13033512-13033868	chr1	-	13333439	13333575	False	NM_001013407,NM_001100631,NM_001013692	chr1,chr1,chr1	+,-,-	PRAMEF5,PRAMEF22,PRAMEF3	26243,-1768,-1747
chr1:13033512-13033868	chr1	+	13138542	13138677	False	NM_001100631,NM_001013407	chr1,chr1	+,-	PRAMEF22,PRAMEF5	-103054,-20791
chr19:52586255-52587372	chr19	+	52586440	52587411	True	NM_014225,NM_001136499	chr19,chr19	+,-	PPP2R1A,ZNF841	105643,11657
chr12:64188452-64189331	chr12	+	64188598	64188747	True	NM_014254,NM_173812	chr12,chr12	+,-	TMEM5,DPY19L2	-15021,-126244
chr8:10510509-10511786	chr8	+	10510639	10511803	True	NM_001040032,NM_178857	chr8,chr8	+,-	C8orf74,RP1L1	18343,864
chr17:79611214-79611659	chr17	+	79611384	79611610	True	NM_017921,NM_031945	chr17,chr17	-,+	NPLOC4,TSPAN10	-7246,-2086
chr14:76448166-76448622	chr14	+	76448340	76448596	True	NM_001102564,NM_052873,NM_003239	chr14,chr14,chr14	+,+,-	C14orf179,C14orf179,TGFB3	3499,3499,-248
chr2:211088799-211089424	chr2	+	211088972	211089396	True	NM_001608,NM_199229	chr2,chr2	-,+	ACADL,RPE	869,-221650
chr11:3240211-3240522	chr11	+	3240273	3240405	True	NR_027138,NM_001164377	chr11,chr11	+,-	C11orf36,MRGPRG	-762,-230
chr12:100750794-100752639	chr12	+	100750978	100752554	True	NM_001145288,NM_152317,NM_139319	chr12,chr12,chr12	+,-,+	SLC17A8,DEPDC4,SLC17A8	-172,-90121,-172
chr2:34129557-34130993	chr2	+	34130190	34130404	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-391308,-176906
chr21:42734776-42735264	chr21	+	42734974	42735114	True	NM_002463,NM_001135099	chr21,chr21	+,-	MX2,TMPRSS2	-1082,144928
chr1:10052689-10053391	chr1	+	10053003	10053238	True	NM_032368,NM_052960	chr1,chr1	-,+	LZIC,RBP7	-50177,4016
chrX:47062128-47062348	chrX	+	47062243	47062397	True	NM_003334,NR_024235,NR_024616	chrX,chrX,chrX	+,-,+	UBA1,NDUFB11,INE1	-9093,-57634,1849
chr5:137701036-137701542	chr5	+	137701226	137701314	True	NM_022809,NM_016604	chr5,chr5	-,+	CDC25C,KDM3B	-33710,-12995
chr6:142622234-142622582	chr6	+	142622239	142622588	True	NM_198569,NM_020455,NM_002511,NM_001032394,NM_001032395	chr6,chr6,chr6,chr6,chr6	+,+,-,+,+	GPR126,GPR126,NMBR,GPR126,GPR126	467,467,-212303,467,467
chr14:22002904-22003199	chr14	+	22002954	22003192	True	NM_005407,NM_014828	chr14,chr14	-,+	SALL2,TOX4	2199,-57670
chr11:32805730-32806634	chr11	+	32805935	32806446	True	NM_001008391,NM_024081	chr11,chr11	-,+	CCDC73,PRRG4	9802,45042
chr9:39900725-39901271	chr9	+	39900732	39900798	True	NR_026803,NR_003528	chr9,chr9	+,-	FAM74A1,LOC653501	-583,-436206
chr9:39900725-39901271	chr9	+	39371448	39371514	False	NR_027861,NM_001040065	chr9,chr9	-,+	ZNF658B,FAM75A2	75724,-15800
chr9:39900725-39901271	chr9	-	41311532	41311598	False	NM_001113541,NM_015667	chr9,chr9	-,+	FAM75A5,FAM75A7	15816,189080
chr9:39900725-39901271	chr9	+	40716084	40716218	False	NR_026801,NM_033160	chr9,chr9	+,-	FAM74A3,ZNF658	-679,76012
chr14:89238821-89240182	chr14	+	89239210	89239903	True	NM_183387,NM_144596	chr14,chr14	-,+	EML5,TTC8	19244,51074
chr1:47900318-47900552	chr1	+	47900350	47900536	True	NR_026878,NM_004474	chr1,chr1	-,+	MGC12982,FOXD2	-37,1152
chr20:48734270-48735639	chr20	+	48734399	48735657	True	NM_021988,NM_001032288,NM_022442,NM_005194,NM_199144	chr20,chr20,chr20,chr20,chr20	-,-,-,+,-	UBE2V1,UBE2V1,UBE2V1,CEBPB,UBE2V1	-1905,-4689,-1908,71718,-1905
chr2:220043382-220043664	chr2	+	220043503	220043709	True	NM_001144889,NM_024293,NM_015680,NM_144712,NM_001144890	chr2,chr2,chr2,chr2,chr2	-,+,-,-,-	SLC23A3,FAM134A,CNPPD1,SLC23A3,SLC23A3	-8686,-615,-1801,-8686,-8686
chr10:23424917-23426590	chr10	+	23425321	23426551	True	NM_012228,NM_153714	chr10,chr10	+,-	MSRB2,C10orf67	-40950,207271
chr19:56090945-56091470	chr19	+	56091106	56091466	True	NM_153219,NM_152600	chr19,chr19	+,-	ZNF524,ZNF579	20263,795
chr12:51418356-51418666	chr12	+	51418485	51418711	True	NM_000617,NM_001174128,NM_001174129,NM_001174125,NM_001174126,NM_001174127,NM_001024668,NR_033422,NR_033421	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,-,-,-,-,-,+,-,-	SLC11A2,SLC11A2,SLC11A2,SLC11A2,SLC11A2,SLC11A2,LETMD1,SLC11A2,SLC11A2	1540,1540,1265,3399,1540,1540,23372,1540,1540
chr2:30461846-30462124	chr2	+	30461974	30462164	True	NM_004304,NM_030915	chr2,chr2	-,+	ALK,LBH	-317497,-7628
chr17:48474991-48475317	chr17	+	48475006	48475316	True	NM_152463,NM_018509	chr17,chr17	+,-	EME1,LRRC59	-24476,-92
chr6:3458604-3459376	chr6	+	3458703	3459404	True	NM_015482,NM_001128592	chr6,chr6	-,+	SLC22A23,PSMG4	-1910,-199594
chr8:79464029-79465552	chr8	+	79464149	79465590	True	NM_000880,NM_181839	chr8,chr8	-,+	IL7,PKIA	252218,-35877
chr6:13330329-13331572	chr6	+	13330503	13331239	True	NM_001143966,NM_001143964,NM_001143965,NM_016495,NM_031244	chr6,chr6,chr6,chr6,chr6	-,-,-,-,+	TBC1D7,TBC1D7,TBC1D7,TBC1D7,SIRT5	-1716,-1716,-1716,-1716,243552
chr6:167570007-167570692	chr6	+	167570042	167570352	True	NM_005299,NM_001145121	chr6,chr6	-,+	GPR31,TCP10L2	1017,13728
chr7:132317302-132318985	chr7	+	132317595	132319010	True	NM_001037126,NM_181775	chr7,chr7	+,-	EXOC4,PLXNA4	618812,14487
chr6:15661799-15662522	chr6	+	15661926	15662446	True	NM_183040,NR_036448,NM_004973,NM_032122	chr6,chr6,chr6,chr6	-,-,+,-	DTNBP1,DTNBP1,JARID2,DTNBP1	893,893,-415459,893
chr7:116829484-116830407	chr7	+	116829606	116830225	True	NR_002332,NR_002331	chr7,chr7	+,-	ST7OT3,ST7OT2	-6928,-43992
chr9:84543829-84545015	chr9	+	84543940	84544990	True	NM_001145197,NM_005077	chr9,chr9	+,-	FAM75D4,TLE1	-648,-240344
chr9:84543829-84545015	chr9	+	84559012	84560062	False	NM_005077,NM_207416	chr9,chr9	-,+	TLE1,FAM75D3	-255416,-648
chr6:79579159-79579545	chr6	+	79579258	79579539	True	NM_001010844,NM_017934	chr6,chr6	+,-	IRAK1BP1,PHIP	-2129,208523
chr2:218929277-218929648	chr2	+	218929325	218929513	True	NM_198483,NR_002712	chr2,chr2	+,-	RUFY4,CXCR2P1	4224,-3312
chr10:31312738-31313411	chr10	+	31312737	31313284	True	NM_001174093,NM_001143768,NM_182755,NR_026560,NM_001143771,NM_001143770,NM_001143766,NM_001143767	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,-,-,-,-,-,-,-	ZEB1,ZNF438,ZNF438,ZNF438,ZNF438,ZNF438,ZNF438,ZNF438	294816,7633,7633,7633,7633,7633,7633,7633
chr22:50450435-50450680	chr22	+	50450554	50450656	True	NM_001001694,NM_001164104	chr22,chr22	-,+	IL17REL,MOV10L1	449,77778
chr13:23711917-23712572	chr13	+	23712060	23712364	True	NM_000231,NR_033774	chr13,chr13	+,-	SGCG,BASP1P1	42695,-239740
chr3:46031779-46032563	chr3	+	46031889	46032272	True	NM_024513,NM_006564	chr3,chr3	-,+	FYCO1,CXCR6	5098,-46968
chr8:119941008-119942943	chr8	+	119941084	119942597	True	NM_002546,NM_006438	chr8,chr8	-,+	TNFRSF11B,COLEC10	21836,136826
chr3:49237627-49238585	chr3	+	49237954	49238264	True	NM_178173,NM_001080528,NM_001135197	chr3,chr3,chr3	+,-,+	CCDC36,LOC646498,CCDC36	-2144,-8663,-1072
chr11:67438135-67438490	chr11	+	67438145	67438437	True	NM_007103,NM_000695	chr11,chr11	+,-	NDUFV1,ALDH3B2	-63873,3715
chr6:144417646-144419463	chr6	+	144417711	144419469	True	NM_031287,NM_003764	chr6,chr6	-,+	SF3B5,STX11	-957,52184
chr11:119217806-119218896	chr11	+	119217963	119218895	True	NM_015645,NM_032015,NM_031433	chr11,chr11,chr11	-,+,-	C1QTNF5,RNF26,MFRP	-580,-12777,-580
chr11:66231972-66233836	chr11	+	66232380	66233660	True	NM_170739,NM_145065,NM_001098510	chr11,chr11,chr11	-,+,+	MRPL11,PELI3,PELI3	-26070,675,675
chr2:47403042-47403297	chr2	+	47403123	47403311	True	NM_001743,NM_002354	chr2,chr2	-,+	CALM2,EPCAM	479,192975
chr7:23573352-23574080	chr7	+	23573485	23573813	True	NM_013293,NR_026676	chr7,chr7	-,+	TRA2A,RPS2P32	-1829,-43533
chr19:55173107-55173400	chr19	+	55173328	55173436	True	NM_006847,NM_001081438,NM_145057	chr19,chr19,chr19	+,+,-	LILRB4,LILRB4,CDC42EP5	687,687,-188906
chr8:81405004-81405771	chr8	+	81405007	81405773	True	NM_005079,NM_023929,NM_001105539	chr8,chr8,chr8	-,+,+	TPD52,ZBTB10,ZBTB10	-321171,-6610,-6610
chr17:30410535-30410850	chr19	-	14359568	14360090	False	NM_014921,NM_001025160	chr19,chr19	-,+	LPHN1,CD97	-42571,132122
chr17:30410535-30410850	chr17	+	30410611	30410891	True	NR_033412,NR_002222	chr17,chr17	+,-	SH3GL1P1,ARGFXP2	-43307,67749
chr17:30410535-30410850	chr17	+	28994667	28995190	False	NM_015986,NR_024187	chr17,chr17	-,+	CRLF3,SUZ12P	157049,41435
chr10:134976039-134976552	chr10	+	134976060	134976506	True	NR_030170,NM_152643	chr10,chr10	-,+	MIR202,KNDC1	84668,-2142
chr20:31280081-31280317	chr20	+	31280090	31280268	True	NM_006892,NM_182584	chr20,chr20	+,-	DNMT3B,C20orf203	69922,-40307
chr12:53443582-53443825	chr12	+	53443595	53443743	True	NM_198316,NM_170754,NM_015319,NR_033854	chr12,chr12,chr12,chr12	+,+,+,-	TENC1,TENC1,TENC1,LOC283335	-2836,91,-913,4529
chr15:80217024-80217620	chr15	+	80217033	80217464	True	NR_028330,NR_037653,NR_037652,NM_001100880,NM_001100879,NM_001199757,NM_001199760	chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,-,-,-,-,-,-	C15orf37,ST20,ST20,ST20,ST20,ST20,ST20-MTHFS	-1971,-937,-937,-1369,-9435,-1369,-1585
chr2:85979503-85980299	chr2	+	85979625	85980283	True	NM_198843,NM_032827	chr2,chr2	-,+	SFTPB,ATOH8	-83761,625
chr15:42386271-42387191	chr15	+	42386302	42387214	True	NM_198141,NM_178034	chr15,chr15	+,-	GANC,PLA2G4D	179151,6
chrX:30674331-30675126	chrX	+	30674330	30674836	True	NM_203391,NM_000167,NM_001205019,NM_025159,NM_001128127	chrX,chrX,chrX,chrX,chrX	+,+,+,-,+	GK,GK,GK,CXorf21,GK	-2910,-2910,-2910,-78297,-2910
chr9:96214277-96214505	chr9	+	96214348	96214550	True	NM_198841,NM_014612	chr9,chr9	-,+	FAM120AOS,FAM120A	1374,-226
chr12:121122711-121123257	chr12	+	121122782	121123022	True	NM_014730,NM_198202	chr12,chr12	+,-	MLEC,POP5	1926,-103581
chr2:62422520-62422756	chr2	+	62422525	62422713	True	NM_006430,NM_006577	chr2,chr2	-,+	CCT4,B3GNT2	-306734,548
chr3:183270360-183270845	chr3	+	183270538	183270862	True	NM_130446,NM_017644	chr3,chr3	-,+	KLHL6,KLHL24	2687,82548
chr7:72424291-72424938	chr7	+	72424298	72424964	True	NR_033323,NR_003602	chr7,chr7	-,+	NSUN5P2,LOC541473	388,15227
chr7:72424291-72424938	chr7	-	75039942	75040608	False	NR_003614,NR_033322	chr7,chr7	-,+	PMS2L2,NSUN5P1	-51727,-369
chr7:72438863-72439822	chr7	+	72438994	72439674	True	NR_033323,NR_003602	chr7,chr7	-,+	NSUN5P2,LOC541473	-13692,517
chr7:72438863-72439822	chr7	+	72741619	72741761	False	NM_001135211,NM_003602,NM_178125	chr7,chr7,chr7	+,+,-	FKBP6,FKBP6,TRIM50	393,538,374
chr7:72438863-72439822	chr7	-	75025225	75025905	False	NM_198853,NM_198924,NR_003614	chr7,chr7,chr7	+,+,-	TRIM74,TRIM73,PMS2L2	-373,-373,-37010
chr3:37285486-37285705	chr3	+	37285532	37285754	True	NM_002078,NM_017724,NM_001172713	chr3,chr3,chr3	+,-,+	GOLGA4,LRRFIP2,GOLGA4	-901,-67681,-901
chr20:38846396-38846681	chr20	+	38846430	38846714	True	NM_003286,NM_005461	chr20,chr20	+,-	TOP1,MAFB	810747,471212
chr4:1007141-1007373	chr4	+	1007140	1007276	True	NM_001004358,NM_001004356,NM_021923,NM_213613	chr4,chr4,chr4,chr4	+,+,+,-	FGFRL1,FGFRL1,FGFRL1,SLC26A1	-1431,-1581,-939,-19916
chr8:37444573-37445772	chr8	+	37444577	37445809	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	107491,159805
chr1:27241911-27243169	chr1	+	27242110	27243060	True	NM_021969,NM_006600	chr1,chr1	-,+	NR0B2,NUDC	-1543,5163
chr8:27182550-27182869	chr8	+	27182549	27182681	True	NM_173176,NM_173175,NM_004103,NM_171982	chr8,chr8,chr8,chr8	+,+,+,-	PTK2B,PTK2B,PTK2B,TRIM35	314,399,-2684,-13715
chr15:32935891-32937525	chr15	+	32935895	32937515	True	NM_003020,NR_036650,NM_001144757	chr15,chr15,chr15	+,-,+	SCG5,LOC100288615,SCG5	-2076,-109953,-2076
chr4:25556609-25557839	chr4	+	25556619	25557456	True	NM_015187,NM_001177998	chr4,chr4	-,+	SEL1L3,SLC34A2	307212,99978
chr2:178713431-178714439	chr2	+	178713456	178714094	True	NM_001077196,NM_152945	chr2,chr2	-,+	PDE11A,RBM45	39424,263087
chr4:15437420-15437886	chr4	+	15437593	15437837	True	NM_001193534,NM_031911	chr4,chr4	-,+	FBXL5,C1QTNF7	219262,-8015
chr10:6134468-6135267	chr10	+	6134494	6135056	True	NM_001145547,NM_032905,NM_000417	chr10,chr10,chr10	+,+,-	RBM17,RBM17,IL2RA	-3238,-3598,-30161
chr1:32039620-32040955	chr1	+	32039859	32040766	True	NM_001204414,NM_001204415,NM_022164,NR_033688	chr1,chr1,chr1,chr1	+,+,+,-	TINAGL1,TINAGL1,TINAGL1,PEF1	1319,2979,1319,69502
chr21:43296760-43298153	chr21	+	43296849	43298150	True	NM_022115,NR_027273,NM_001040424	chr21,chr21,chr21	-,+,-	PRDM15,C21orf121,PRDM15	1491,143962,1482
chr7:23727958-23728548	chr7	+	23728006	23728596	True	NM_199136,NR_002711,NM_001127364,NM_001127365	chr7,chr7,chr7,chr7	+,-,+,+	C7orf46,CLK2P,C7orf46,C7orf46	-8317,-101860,-8317,-8317
chr21:27916147-27917977	chr21	+	27916356	27917852	True	NM_002040,NM_052954	chr21,chr21	+,-	GABPA,CYYR1	-809089,27779
chr17:40263824-40264343	chr17	+	40264290	40264360	True	NM_024119,NM_021078,NM_033194	chr17,chr17,chr17	-,-,+	DHX58,KAT2A,HSPB9	441,9072,10395
chr5:137669916-137670790	chr5	+	137670380	137670772	True	NM_001135647,NM_001790,NM_022809,NM_016605	chr5,chr5,chr5,chr5	+,-,-,+	FAM53C,CDC25C,CDC25C,FAM53C	2451,-2864,-2864,2931
chr6:167622668-167623409	chr6	+	167622718	167623358	True	NM_005299,NM_001145121	chr6,chr6	-,+	GPR31,TCP10L2	-51399,-38688
chr2:201828902-201830434	chr2	+	201829080	201829736	True	NR_033915,NM_001142356,NM_006190	chr2,chr2,chr2	-,+,-	ORC2,NIF3L1,ORC2	-656,-72490,-656
chr16:11370112-11370347	chr16	+	11370129	11370233	True	NM_005425,NM_021247,NM_152308,NM_002761,NM_002762	chr16,chr16,chr16,chr16,chr16	-,-,+,-,-	TNP2,PRM3,C16orf75,PRM1,PRM2	-6969,-2677,69077,5009,154
chr6:3002701-3003196	chr6	+	3002830	3002908	True	NR_033884,NM_000904	chr6,chr6	-,+	LOC401233,NQO2	22147,-2814
chr10:103914133-103915260	chr10	+	103914133	103915102	True	NM_001113407,NM_004741	chr10,chr10	-,+	LDB1,NOLC1	-33923,-2265
chr6:34204757-34204970	chr6	+	34204944	34205010	True	NM_002131,NM_145899,NM_001008703,NM_145902,NM_145903,NM_145901,NM_145905	chr6,chr6,chr6,chr6,chr6,chr6,chr6	+,+,-,+,+,+,+	HMGA1,HMGA1,C6orf1,HMGA1,HMGA1,HMGA1,HMGA1	-418,-418,11944,-345,-418,-345,1557
chr22:38992523-38992964	chr22	+	38992639	38992980	True	NM_001002880,NM_007068	chr22,chr22	+,-	CBY1,DMC1	59677,-26450
chr11:113569400-113569709	chr11	+	113569456	113569724	True	NM_001101389,NM_030770	chr11,chr11	+,-	CLDN25,TMPRSS5	80793,7394
chr22:31318873-31319749	chr22	+	31319179	31319761	True	NM_014941,NR_026920	chr22,chr22	-,+	MORC2,C22orf27	44476,-935
chr10:123748433-123749716	chr10	+	123748704	123749559	True	NM_017615,NM_206861,NM_206862	chr10,chr10,chr10	-,+,+	NSMCE4A,TACC2,TACC2	-13961,-66,-66
chr3:196240354-196241703	chr3	+	196240670	196241627	True	NM_001105573,NM_001077657	chr3,chr3	+,-	FBXO45,C3orf43	54097,663
chr20:5728618-5729118	chr20	+	5728766	5729048	True	NM_019593,NM_152504	chr20,chr20	-,+	GPCPD1,C20orf196	-137094,1994
chr20:55840009-55840215	chr20	+	55840150	55840210	True	NM_012444,NM_001719	chr20,chr20	+,-	SPO11,BMP7	64620,1547
chr16:23850298-23850636	chr16	+	23850313	23850602	True	NM_212535,NM_033266,NM_002738	chr16,chr16,chr16	+,-,+	PRKCB,ERN2,PRKCB	-3071,-125492,-3071
chr13:113860947-113862445	chr13	+	113861104	113862392	True	NM_001127203,NM_001127202,NM_003589,NM_001008895,NM_018386	chr13,chr13,chr13,chr13,chr13	-,-,+,+,-	PCID2,PCID2,CUL4A,CUL4A,PCID2	687,687,693,1538,687
chr2:61303685-61304389	chr2	+	61303849	61304441	True	NM_032506,NM_144709	chr2,chr2	+,-	KIAA1841,PUS10	-10550,-58484
chr12:15929294-15930363	chr12	+	15929383	15930381	True	NM_004447,NM_007178	chr12,chr12	-,+	EPS8,STRAP	12187,104906
chr6:110019214-110019755	chr6	+	110019556	110019770	True	NM_145025,NM_001145128,NM_014845	chr6,chr6,chr6	-,-,+	AKD1,AKD1,FIG4	-7141,-7141,-7191
chr3:16974723-16975413	chr3	+	16974748	16975248	True	NM_015184,NM_001351,NR_037465	chr3,chr3,chr3	+,-,+	PLCL2,DAZL,MIR3714	-218,-327742,-112
chr16:85787282-85787935	chr16	+	85787282	85787743	True	NM_001861,NM_206967	chr16,chr16	+,-	COX4I1,C16orf74	45429,-2593
chr12:132413573-132413807	chr12	+	132413725	132413821	True	NM_175066,NM_001002020,NM_025215,NM_001002019	chr12,chr12,chr12,chr12	-,+,+,+	DDX51,PUS1,PUS1,PUS1	215109,-31,5,8
chr19:35594047-35594669	chr19	+	35594245	35594474	True	NM_001136009,NR_024562,NR_024561	chr19,chr19,chr19	+,-,-	FXYD3,LOC100128675,LOC100128675	12257,2793,2760
chr9:131644731-131645037	chr9	+	131644766	131644966	True	NM_001127245,NM_001127244,NM_019594,NM_001122672,NM_001122671,NM_004059	chr9,chr9,chr9,chr9,chr9,chr9	+,+,+,-,-,-	LRRC8A,LRRC8A,LRRC8A,CCBL1,CCBL1,CCBL1	-426,-36,-426,-412,-412,-412
chr6:26033648-26034143	chr6	+	26033720	26034166	True	NM_003537,NM_003531,NM_003544,NM_021062,NM_003538,NM_003513	chr6,chr6,chr6,chr6,chr6,chr6	-,+,-,-,+,-	HIST1H3B,HIST1H3C,HIST1H4B,HIST1H2BB,HIST1H4A,HIST1H2AB	-1432,11472,-6240,9769,-11864,14
chr2:132485271-132486470	chr2	+	132485346	132486518	True	NM_214461,NM_013310	chr2,chr2	-,+	C2orf27B,C2orf27A	72766,-5336
chr3:100433266-100434679	chr3	+	100433856	100434362	True	NM_001007565,NM_006070,NM_015429,NM_001195479,NM_001195478	chr3,chr3,chr3,chr3,chr3	+,+,-,+,+	TFG,TFG,ABI3BP,TFG,TFG	-5774,-5733,278022,-5733,-5522
chr19:12911203-12911957	chr19	+	12911300	12911826	True	NM_002229,NM_005809,NM_181738,NM_006397	chr19,chr19,chr19,chr19	+,-,-,+	JUNB,PRDX2,PRDX2,RNASEH2A	-9041,918,918,5601
chr2:157188520-157188805	chr2	+	157188538	157188712	True	NM_001083112,NM_006186	chr2,chr2	+,-	GPD2,NR4A2	103252,625
chr1:110198052-110198573	chr1	+	110198182	110198512	True	NM_000850,NM_147148,NR_024538,NM_005272	chr1,chr1,chr1,chr1	+,+,+,-	GSTM4,GSTM4,GSTM4,GNAT2	185,185,185,-42477
chr10:75671572-75672328	chr10	+	75671643	75672315	True	NM_002658,NM_001001791,NM_001145031	chr10,chr10,chr10	+,-,+	PLAU,C10orf55,PLAU	-832,10270,-832
chr16:10912571-10912848	chr16	+	10912676	10912834	True	NM_000246,NM_001079512	chr16,chr16	+,-	CIITA,FAM18A	58220,-55
chr6:35693562-35693871	chr6	+	35693565	35693915	True	NM_001145775,NM_145028	chr6,chr6	-,+	FKBP5,C6orf81	2495,10943
chr1:116649377-116649927	chr1	+	116649442	116649788	True	NM_152367,NM_005599	chr1,chr1	+,-	MAB21L3,NHLH2	4587,-265695
chr17:47439867-47440502	chr17	+	47440025	47440457	True	NM_014897,NR_034161,NM_001145365	chr17,chr17,chr17	-,+,-	ZNF652,FLJ40194,ZNF652	-190,-114471,-549
chr9:130360022-130360944	chr9	+	130360151	130360823	True	NM_001032221,NM_001035534	chr9,chr9	+,-	STXBP1,FAM129B	13662,-18883
chr6:168198853-168199405	chr6	+	168198972	168199435	True	NR_026773,NM_001040000	chr6,chr6	-,+	C6orf123,MLLT4	-1433,28235
chr21:43298701-43298924	chr21	+	43298700	43298780	True	NM_022115,NR_027273,NM_001040424	chr21,chr21,chr21	-,+,-	PRDM15,C21orf121,PRDM15	861,143332,852
chr11:118088291-118089101	chr11	+	118088334	118089142	True	NM_001098526,NM_153206,NM_000733	chr11,chr11,chr11	-,-,+	AMICA1,AMICA1,CD3E	6717,-4260,86152
chr11:102218244-102218704	chr11	+	102218392	102218743	True	NM_001166,NM_052932	chr11,chr11	+,-	BIRC2,TMEM123	-479,105083
chr19:36857425-36858473	chr19	+	36857549	36858367	True	NM_020917,NR_033748	chr19,chr19	-,+	ZFP14,LOC644189	11788,54071
chr19:17326804-17328340	chr19	+	17326804	17328331	True	NM_005234,NM_024578,NM_018467	chr19,chr19,chr19	-,+,+	NR2F6,OCEL1,USE1	27870,8723,-700
chr20:60796003-60796222	chr20	+	60796077	60796257	True	NM_007232,NM_014835	chr20,chr20	-,+	HRH3,OSBPL2	-754,17322
chr7:44886734-44887266	chr7	+	44886774	44887246	True	NM_201436,NM_012412,NM_201516,NM_201517,NM_021130,NM_138635	chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,+,-	H2AFV,H2AFV,H2AFV,H2AFV,PPIA,H2AFV	529,529,529,529,-50585,529
chr7:2600445-2601145	chr7	+	2600906	2601052	True	NM_001100390,NM_152558,NM_152743	chr7,chr7,chr7	+,+,-	IQCE,IQCE,BRAT1	-2331,-2331,-5514
chr11:69186889-69187773	chr11	+	69187053	69187697	True	NM_153451,NM_138768	chr11,chr11	-,+	ORAOV1,MYEOV	302518,-125482
chr14:24026602-24027958	chr14	+	24026815	24027988	True	NR_023314,NM_003917,NM_024328,NM_033400,NM_001126339	chr14,chr14,chr14,chr14,chr14	+,-,+,-,+	THTPA,AP1G2,THTPA,ZFHX2,THTPA	-1676,9341,-1676,-5957,-1676
chr10:31988773-31989192	chr10	+	31988830	31989182	True	NM_001174094,NM_018287	chr10,chr10	+,-	ZEB1,ARHGAP12	-378817,228646
chr19:10812452-10812896	chr19	+	10812511	10812939	True	NM_031209,NR_024333	chr19,chr19	+,-	QTRT1,LOC147727	-450,-47963
chr10:95372790-95373065	chr10	+	95372844	95373068	True	NM_006744,NM_006204	chr10,chr10	-,+	RBP4,PDE6C	-11851,-550
chr5:111250261-111251199	chr5	+	111250406	111251236	True	NM_001142474,NR_015370	chr5,chr5	-,+	C5orf13,NCRNA00219	61442,244986
chr1:175161931-175162246	chr1	+	175162029	175162143	True	NM_001162893,NM_022093,NM_014656,NM_001162895,NM_001162894	chr1,chr1,chr1,chr1,chr1	-,+,-,-,-	KIAA0040,TNN,KIAA0040,KIAA0040,KIAA0040	136,-125086,-80,-80,136
chr17:33700815-33701044	chr17	+	33700857	33701073	True	NM_001104587,NM_001104590,NM_001104589,NM_001104588,NM_144975,NM_152270	chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,+,-	SLFN11,SLFN11,SLFN11,SLFN11,SLFN5,SLFN11	-137,-137,-137,-137,-130822,-137
chr3:53162236-53163763	chr3	+	53162423	53163809	True	NM_006254,NM_052859	chr3,chr3	+,-	PRKCD,RFT1	31413,719
chr19:56184302-56185418	chr19	+	56184604	56185394	True	NM_001130072,NM_203374,NM_001130071,NM_013333	chr19,chr19,chr19,chr19	+,-,+,+	EPN1,ZNF784,EPN1,EPN1	1166,-48663,2596,1166
chr2:197501363-197502076	chr2	+	197501647	197502027	True	NM_020760,NM_001080539	chr2,chr2	-,+	HECW2,CCDC150	-44312,2328
chr2:71692663-71693231	chr2	+	71692732	71693142	True	NM_001130982,NM_001130983,NM_001130986,NM_001130455,NM_001130984,NM_001130985,NM_020459,NM_001130987	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,+,+,-,+	DYSF,DYSF,DYSF,DYSF,DYSF,DYSF,PAIP2B,DYSF	689,689,689,689,689,689,-238499,689
chr15:20770716-20771619	chr15	+	20771037	20771249	True	NM_001145004,NR_027411	chr15,chr15	-,+	GOLGA6L6,GOLGA8C	-23923,-3414
chr15:20770716-20771619	chr15	+	28627278	28627358	False	NM_004667,NR_033351,NR_033353	chr15,chr15,chr15	-,+,+	HERC2,GOLGA8F,GOLGA8G	-59983,-3548,-3548
chr15:20770716-20771619	chr15	-	28774568	28774648	False	NR_036443,NR_033351,NR_033353	chr15,chr15,chr15	+,-,-	HERC2P9,GOLGA8F,GOLGA8G	124939,3548,3548
chr15:20770716-20771619	chr15	+	23438435	23438629	False	NR_002824,NR_033350	chr15,chr15	-,+	HERC2P2,GOLGA8E	-60176,-3416
chr15:20770716-20771619	chr15	-	22712150	22712362	False	NR_027407,NM_001001413	chr15,chr15	-,+	GOLGA8DP,GOLGA6L1	3416,23883
chr2:25140626-25141008	chr2	+	25140637	25140965	True	NR_034113,NM_004036	chr2,chr2	+,-	LOC729723,ADCY3	54015,1140
chr22:37215378-37215617	chr22	+	37215397	37215607	True	NM_000631,NM_002854	chr22,chr22	+,-	NCF4,PVALB	41422,-6
chr3:12704674-12704933	chr3	+	12704712	12704922	True	NM_002880,NM_014160	chr3,chr3	-,+	RAF1,MKRN2	828,-106169
chr2:95963594-95965206	chr2	+	95963662	95965084	True	NM_013434,NM_032788	chr2,chr2	+,-	KCNIP3,ZNF514	-644,-138399
chr19:46287132-46287336	chr19	+	46287232	46287348	True	NM_004943,NM_004409,NM_001081563,NM_001081562,NM_001081560,NM_004497	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,+	DMWD,DMPK,DMPK,DMPK,DMPK,FOXA3	8762,-1417,-3371,-1417,-1417,80169
chr17:37385325-37385875	chr17	+	37385461	37385763	True	NM_198993,NM_000981	chr17,chr17	-,+	STAC2,RPL19	-3421,-28977
chr8:143546725-143547064	chr8	+	143546847	143546911	True	NM_145003,NM_001702	chr8,chr8	-,+	TSNARE1,BAI1	-62304,-1521
chr9:111776902-111777321	chr9	+	111776929	111777341	True	NM_003798,NM_017832	chr9,chr9	-,+	CTNNAL1,C9orf6	-1165,-80307
chr14:21270200-21271016	chr14	+	21270354	21270606	True	NM_198232,NM_005615,NM_198234,NM_002933,NM_198235	chr14,chr14,chr14,chr14,chr14	-,+,-,-,-	RNASE1,RNASE6,RNASE1,RNASE1,RNASE1	14,-21195,492,492,492
chr15:34682728-34684368	chr15	+	34682887	34684164	True	NM_175741,NR_036050,NM_181077,NR_036261	chr15,chr15,chr15,chr15	+,-,-,-	C15orf55,MIR1233-1,GOLGA8A,MIR1233-2	-44873,-8536,-886,-8536
chr15:34682728-34684368	chr15	+	34829108	34830385	False	NR_036050,NM_175741,NM_001023567,NR_036261	chr15,chr15,chr15,chr15	-,+,-,-	MIR1233-1,C15orf55,GOLGA8B,MIR1233-2	-8536,-191094,-886,-8536
chr22:19421444-19422039	chr22	+	19421624	19422089	True	NM_003776,NM_003325	chr22,chr22	+,-	MRPL40,HIRA	-1646,-2405
chr3:52476765-52477000	chr3	+	52476798	52476938	True	NM_020163,NM_007184	chr3,chr3	-,+	SEMA3G,NISCH	2155,12585
chr1:146727175-146727935	chr1	+	146727254	146727924	True	NM_004284,NM_001461	chr1,chr1	+,-	CHD1L,FMO5	-13014,-30024
chr19:44576519-44576838	chr19	+	44576619	44576833	True	NM_001037813,NR_033341	chr19,chr19	+,-	ZNF284,LOC100379224	-375,40553
chr20:46012995-46013355	chr20	+	46013060	46013258	True	NM_183048,NR_024594	chr20,chr20	-,+	ZMYND8,LOC100131496	-27586,-65866
chr1:212798039-212798489	chr1	+	212798209	212798523	True	NM_153606,NM_018664	chr1,chr1	+,-	FAM71A,BATF3	-471,74854
chr5:63804944-63805420	chr5	+	63804964	63805315	True	NM_001029875,NM_173829	chr5,chr5	+,-	RGS7BP,SREK1IP1	-2570,259238
chr12:6981622-6981828	chr12	+	6981660	6981776	True	NM_032641,NM_000365,NM_001146316,NR_027483,NM_001159287	chr12,chr12,chr12,chr12,chr12	-,+,-,+,+	SPSB2,TPI1,SPSB2,TPI1,TPI1	795,-5018,723,-4433,-5127
chr14:75327790-75328995	chr14	+	75327892	75328831	True	NM_001933,NM_001080408	chr14,chr14	+,-	DLST,PROX2	19762,1756
chr10:22611073-22613023	chr10	+	22611318	22613054	True	NR_036533,NM_005180,NM_001199938,NM_012071,NM_001204062	chr10,chr10,chr10,chr10,chr10	-,+,-,+,+	LOC100499489,BMI1,EBLN1,COMMD3,COMMD3-BMI1	113854,-1230,-112406,-6057,-6057
chr22:38715766-38716094	chr22	+	38715810	38716093	True	NM_152221,NM_001161573,NM_001894	chr22,chr22,chr22	-,+,-	CSNK1E,MAFF,CSNK1E	-2397,-116834,-1721
chr3:184974200-184975184	chr3	+	184974557	184975223	True	NM_001966,NM_004721,NM_001166415	chr3,chr3,chr3	-,+,-	EHHADH,MAP3K13,EHHADH	-2671,105746,-2671
chr19:7734318-7735093	chr19	+	7734413	7735133	True	NM_020415,NM_174918,NM_001193374,NM_002002	chr19,chr19,chr19,chr19	+,+,+,-	RETN,C19orf59,RETN,FCER2	-493,6809,-493,31949
chr1:28415270-28415613	chr1	+	28415323	28415455	True	NR_027268,NM_018053,NM_001990	chr1,chr1,chr1	-,+,-	LOC653566,XKR8,EYA3	7668,-128870,-175
chr8:27332002-27332812	chr8	+	27332041	27332807	True	NM_001979,NM_000742	chr8,chr8	+,-	EPHX2,CHRNA2	15837,4058
chrX:134971724-134972031	chr1	+	202136113	202136183	True	NR_002930,NR_037663,NR_037664,NM_001199797,NM_080588,NM_002832	chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,-,-,-	PTPRVP,PTPN7,PTPN7,PTPN7,PTPN7,PTPN7	995,-5397,-5397,-5397,-6994,-5397
chr2:61699816-61700098	chr2	+	61699869	61699971	True	NM_014709,NM_152392	chr2,chr2	-,+	USP34,AHSA2	-2020,-295366
chr3:47022786-47023407	chr3	+	47022980	47023320	True	NM_144716,NM_015175	chr3,chr3	-,+	CCDC12,NBEAL2	-4710,-1858
chr10:103535465-103535668	chr10	+	103535498	103535568	True	NM_006993,NM_033164,NM_033165,NM_033163,NR_036114,NM_006119	chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,+,-	NPM3,FGF8,FGF8,FGF8,MIR3158-1,FGF8	7652,241,241,241,-174375,241
chr19:55552416-55552810	chr19	+	55552795	55552859	True	NM_001083899,NM_133180,NM_016363	chr19,chr19,chr19	-,+,-	GP6,EPS8L1,GP6	-3163,34361,-3163
chr1:55089180-55089458	chr1	+	55089273	55089495	True	NM_176782,NR_026782	chr1,chr1	-,+	FAM151A,HEATR8	-73,17931
chr1:234744587-234744825	chr1	+	234744632	234744790	True	NR_033927,NM_001077397,NM_182972	chr1,chr1,chr1	+,-,-	NCRNA00184,IRF2BP2,IRF2BP2	20266,531,531
chr17:7154174-7154625	chr17	+	7154199	7154571	True	NM_015343,NM_007278,NM_203415,NM_203414,NM_203413,NM_015362,NM_001143775	chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,+,+,+,-	CTDNEP1,GABARAP,C17orf81,C17orf81,C17orf81,C17orf81,CTDNEP1	738,-8446,800,979,979,979,474
chr20:60796222-60796505	chr20	+	60796221	60796473	True	NM_007232,NM_014835	chr20,chr20	-,+	HRH3,OSBPL2	-898,17106
chr5:173137735-173138422	chr5	+	173137797	173138445	True	NR_027109,NM_138369	chr5,chr5	+,-	LOC285593,BOD1	-131205,-94131
chr12:53230521-53231796	chr12	+	53230931	53231664	True	NM_199187,NM_175834	chr12,chr12	+,-	KRT18,KRT79	110990,-2854
chr12:27617816-27619075	chr12	+	27618018	27619076	True	NM_001145010,NM_001146221	chr12,chr12	+,-	C12orf70,LOC100287284	666,305183
chr6:44191615-44191820	chr6	+	44191622	44191862	True	NM_004955,NM_178148,NM_001078174,NM_001078175,NM_001078176,NM_001078177	chr6,chr6,chr6,chr6,chr6,chr6	+,-,+,+,+,+	SLC29A1,SLC35B2,SLC29A1,SLC29A1,SLC29A1,SLC29A1	-4431,33471,-4431,-377,-377,-310
chr17:8056028-8056333	chr17	+	8056040	8056304	True	NM_002616,NR_037447	chr17,chr17	-,+	PER1,MIR3676	-287,34188
chr1:116308783-116309358	chr1	+	116308806	116309358	True	NM_001232,NM_001172412	chr1,chr1	-,+	CASQ2,VANGL1	2118,-123607
chr11:62105257-62105483	chr11	+	62105405	62105499	True	NM_001083926,NM_206998,NM_025080	chr11,chr11,chr11	+,-,+	ASRGL1,SCGB1D4,ASRGL1	-682,-38869,-682
chr13:21533194-21533548	chr13	+	21533419	21533491	True	NM_022459,NM_005870	chr13,chr13	-,+	XPO4,SAP18	-56506,181161
chr6:127836072-127836500	chr6	+	127836077	127836513	True	NM_001010905,NM_001012279	chr6,chr6	+,-	C6orf58,C6orf174	61805,4037
chr15:41523015-41523271	chr15	+	41523091	41523249	True	NM_007236,NM_152596	chr15,chr15	+,-	CHP,EXD1	187,-196
chr2:86695761-86696657	chr2	+	86695768	86696636	True	NM_001146688,NM_001005753	chr2,chr2	+,-	KDM3A,VPS24	-27236,94042
chr16:81271162-81272662	chr16	+	81271295	81272522	True	NM_017429,NM_001076780	chr16,chr16	+,-	BCMO1,PKD1L2	-15,-17320
chr8:41388695-41390073	chr8	+	41388915	41389935	True	NM_152568,NM_032336	chr8,chr8	-,+	NKX6-3,GINS4	115000,-2241
chr4:147442182-147442747	chr4	+	147442211	147442565	True	NM_001029998,NM_032128,NM_004575	chr4,chr4,chr4	-,-,+	SLC10A7,SLC10A7,POU4F2	609,609,117479
chr22:17693777-17694387	chr22	+	17693921	17694389	True	NM_017424,NR_024483	chr22,chr22	-,+	CECR1,CECR4	-3142,-53693
chr6:117086918-117088130	chr6	+	117086976	117088157	True	NM_001085480,NM_002269	chr6,chr6	-,+	FAM162B,KPNA5	-90,-84660
chr15:73072492-73072991	chr15	+	73072600	73072889	True	NM_031284,NR_023319,NR_023318,NM_033028	chr15,chr15,chr15,chr15	-,-,-,+	ADPGK,ADPGK,ADPGK,BBS4	3298,3298,3298,-94125
chr7:47979397-47979828	chr7	+	47979585	47979867	True	NM_138295,NM_001100159	chr7,chr7	-,+	PKD1L1,C7orf57	8254,95249
chrX:83442731-83443056	chrX	+	83442854	83442980	True	NM_021118,NM_014496	chrX,chrX	+,-	CYLC1,RPS6KA6	-326735,13
chr2:97524543-97524757	chr2	+	97524707	97524801	True	NM_016466,NM_199078	chr2,chr2	-,+	ANKRD39,CNNM3	-951,-42767
chr13:27336445-27337094	chr13	+	27336461	27336793	True	NM_005288,NM_006646	chr13,chr13	-,+	GPR12,WASF3	-1539,-204672
chr20:25990738-25991534	chr20	+	25990902	25991564	True	NR_004846,NR_003678	chr20,chr20	+,-	LOC100134868,C20orf191	-518,103163
chr20:25990738-25991534	chr20	-	25825617	25825679	False	NR_004846,NR_026714	chr20,chr20	+,-	LOC100134868,FAM182B	164755,-43690
chr7:72476197-72476454	chr7	+	72476197	72476413	True	NM_001013739,NR_003614	chr7,chr7	-,+	STAG3L3,PMS2L2	92,266
chr7:72476197-72476454	chr7	+	74306528	74306647	False	NR_027777,NR_027776,NM_001025202,NR_027775	chr7,chr7,chr7,chr7	+,+,-,+	PMS2P5,PMS2P5,STAG3L2,PMS2P5	246,246,157,246
chr7:72476197-72476454	chr7	-	74988481	74988696	False	NR_003614,NM_001002840,NM_018991	chr7,chr7,chr7	-,+,+	PMS2L2,STAG3L1,STAG3L1	-266,-85,-85
chr19:38916995-38917410	chr19	+	38917015	38917358	True	NM_170604,NM_001146204,NM_001146205,NM_001146206,NM_001146207,NM_001146202,NM_001146203,NM_000540,NM_001042723	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,+,+	RASGRP4,RASGRP4,RASGRP4,RASGRP4,RASGRP4,RASGRP4,RASGRP4,RYR1,RYR1	-70,-70,-70,-70,-70,-70,-70,6981,6981
chr8:101171644-101172252	chr8	+	101171654	101172275	True	NM_172218,NM_003114,NM_005034,NR_036491	chr8,chr8,chr8,chr8	+,+,+,-	SPAG1,SPAG1,POLR2K,FBXO43	-1443,-1143,-8867,-13555
chr8:126443578-126443931	chr8	+	126443607	126443793	True	NM_014846,NM_025195	chr8,chr8	-,+	KIAA0196,TRIB1	-339546,-1095
chr4:3552389-3552738	chr4	+	3552475	3552695	True	NM_002337,NM_173660	chr4,chr4	-,+	LRPAP1,DOK7	-18251,-87493
chr17:26367679-26367911	chr17	+	26367816	26367950	True	NM_001076680,NM_016231	chr17,chr17	-,+	C17orf108,NLK	-147407,1737
chr17:73149524-73149917	chr17	+	73149578	73149954	True	NM_016185,NM_001002032,NM_001002033,NM_024585	chr17,chr17,chr17,chr17	-,-,-,+	HN1,HN1,HN1,ARMC7	871,870,870,-43547
chr1:6258922-6259311	chr1	+	6258951	6259219	True	NM_000983,NM_207396	chr1,chr1	-,+	RPL22,RNF207	510,6969
chr6:80350379-80352232	chr6	+	80350589	80352229	True	NM_031469,NM_181714	chr6,chr6	+,-	SH3BGRL2,LCA5	-9643,-103442
chrX:12808316-12809179	chrX	+	12808319	12809171	True	NM_001039091,NR_030727,NM_002765	chrX,chrX,chrX	+,-,+	PRPS2,LOC349408,PRPS2	302,152298,302
chr5:134241163-134241608	chr5	+	134241163	134241532	True	NM_032151,NM_002653	chr5,chr5	+,-	PCBD2,PITX1	-409,128487
chr16:87417281-87417491	chr16	+	87417288	87417398	True	NM_022818,NM_024735,NR_024568	chr16,chr16,chr16	+,-,-	MAP1LC3B,FBXO31,FBXO31	8402,46,8360
chr9:37636284-37636704	chr9	+	37636364	37636526	True	NM_014907,NM_001134485	chr9,chr9	+,-	FRMPD1,TOMM5	14525,-43728
chr4:83821790-83822008	chr4	+	83821812	83821924	True	NM_001077208,NM_024672,NM_014933,NM_016211,NM_001191049,NM_001077207,NM_001077206,NR_034075,NR_034076,NR_034077	chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4	-,+,-,-,-,-,-,-,-,-	SEC31A,THAP9,SEC31A,SEC31A,SEC31A,SEC31A,SEC31A,LOC100499177,LOC100499177,LOC100499177	-9400,-26,-9393,-9400,-9477,-9400,-9400,195,195,195
chr22:50691304-50691563	chr22	+	50691305	50691587	True	NM_032019,NM_002969,NM_031454,NM_020461,NM_001159286	chr22,chr22,chr22,chr22,chr22	-,-,+,-,-	HDAC10,MAPK12,SELO,TUBGCP6,HDAC10	-1471,8552,-51948,-7905,-1471
chr16:85203930-85204188	chr16	+	85203934	85204046	True	NR_033984,NM_198491	chr16,chr16	+,-	LOC400548,FAM92B	-33229,-57820
chr6:80816683-80818298	chr6	+	80816734	80818013	True	NM_183050,NM_022726,NM_000056	chr6,chr6,chr6	+,-,+	BCKDHB,ELOVL4,BCKDHB	-441,-159419,-441
chr22:44318228-44318844	chr22	+	44318244	44318598	True	NM_025225,NM_138814	chr22,chr22	+,-	PNPLA3,PNPLA5	1020,-30351
chr3:150470475-150471303	chr3	+	150470665	150471235	True	NM_005067,NM_016275	chr3,chr3	-,+	SIAH2,SELT	10078,-149657
chr1:150849592-150849962	chr1	+	150849757	150850011	True	NM_001197325,NM_001145415,NM_001668,NM_178427	chr1,chr1,chr1,chr1	-,+,-,-	ARNT,SETDB1,ARNT,ARNT	-513,48803,-513,-513
chrX:72346315-72346972	chrX	+	72346362	72346817	True	NR_027291,NM_001042506	chrX,chrX	-,+	NAP1L6,PABPC1L2B	1155,-123061
chr17:33908722-33909045	chr17	+	33908872	33908953	True	NR_003037,NM_001282,NM_001030006,NM_000286	chr17,chr17,chr17,chr17	+,+,+,-	SNORD7,AP2B1,AP2B1,PEX12	-8256,5328,5328,-3216
chr1:231663753-231664040	chr1	+	231663807	231663921	True	NR_028393,NR_028394,NR_028395,NR_028396,NR_028397,NR_028398,NR_028399,NR_033826,NM_005999,NR_028400	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,+,+,-,+,+	TSNAX-DISC1,TSNAX-DISC1,TSNAX-DISC1,TSNAX-DISC1,TSNAX-DISC1,TSNAX-DISC1,TSNAX-DISC1,SNRPD2P2,TSNAX,TSNAX-DISC1	477,477,477,477,477,477,477,-51536,477,477
chr7:148822431-148822741	chr7	+	148822455	148822759	True	NM_001001661,NM_020781	chr7,chr7	-,+	ZNF425,ZNF398	729,748
chr15:91564033-91565457	chr15	+	91564214	91565380	True	NM_018668,NM_033544	chr15,chr15	-,+	VPS33B,RCCD1	503,-66168
chr15:90727400-90727825	chr15	+	90727426	90727824	True	NM_020210,NM_006384	chr15,chr15	+,-	SEMA4B,CIB1	327,49505
chr10:5408680-5409788	chr10	+	5408763	5409686	True	NM_001171864,NM_053049	chr10,chr10	-,+	TUBAL3,UCN3	37157,-1838
chr8:16883024-16884177	chr8	+	16883148	16884217	True	NM_181723,NM_019851	chr8,chr8	+,-	EFHA2,FGF20	529,-23474
chr14:57701441-57703297	chr14	+	57701588	57703346	True	NM_018229,NM_006544	chr14,chr14	+,-	MUDENG,EXOC5	32259,32322
chr16:31041532-31042791	chr16	+	31041948	31042597	True	NM_004604,NM_052874	chr16,chr16	+,-	STX4,STX1B	2305,-20119
chr2:8818384-8818765	chr2	+	8818424	8818741	True	NM_020738,NM_002166	chr2,chr2	-,+	KIDINS220,ID2	159065,3371
chr3:124919820-124920338	chr3	+	124919821	124920350	True	NM_001195483,NR_033437	chr3,chr3	-,+	SLC12A8,UMPS	9951,-470666
chrX:69450036-69451955	chrX	+	69450398	69451759	True	NM_001013579,NM_002565	chrX,chrX	+,-	AWAT1,P2RY4	2745,27945
chr19:36550950-36551392	chr19	+	36550995	36551345	True	NM_001083961,NM_152658,NM_173636	chr19,chr19,chr19	+,-,+	WDR62,THAP8,WDR62	-5263,-5331,-5263
chr7:43768882-43769140	chr7	+	43768992	43769184	True	NM_000712,NM_018224	chr7,chr7	+,-	BLVRA,C7orf44	29087,33
chr17:3628995-3629363	chr17	+	3629045	3629409	True	NM_175080,NM_031965	chr17,chr17	-,+	P2RX5,GSG2	-29347,-1899
chr15:43560163-43561766	chr15	+	43560168	43561512	True	NM_201631,NM_001012969,NM_004245	chr15,chr15,chr15	-,+,-	TGM5,ADAL,TGM5	-1113,61359,-1113
chr12:106749214-106750186	chr12	+	106749874	106750191	True	NM_018082,NM_001160708,NM_006825	chr12,chr12,chr12	+,+,-	POLR3B,POLR3B,CKAP4	1244,1668,-108161
chr8:99058348-99059314	chr8	+	99058483	99059035	True	NR_002581,NM_001170806,NM_000989	chr8,chr8,chr8	-,+,-	SNORA72,C8orf47,RPL30	-4038,17714,-665
chr1:203273322-203274310	chr1	+	203273390	203274200	True	NM_006763,NR_034151,NR_034150	chr1,chr1,chr1	+,-,-	BTG2,LOC730227,LOC730227	463,303,303
chr11:20181909-20182134	chr11	+	20181953	20182145	True	NM_001111019,NM_001029865	chr11,chr11	+,-	NAV2,DBX1	-137368,-83
chr9:135956913-135957714	chr9	+	135957054	135957686	True	NR_001275,NM_006266	chr9,chr9	+,-	CELP,RALGDS	239,38925
chr9:135956913-135957714	chr9	+	135937078	135937128	False	NM_001807,NM_006266	chr9,chr9	+,-	CEL,RALGDS	236,59483
chr5:42970836-42971241	chr5	+	42970835	42971037	True	NR_015447,NR_034086	chr5,chr5	+,-	LOC153684,LOC648987	71198,47926
chr8:71513882-71514928	chr8	+	71513964	71514987	True	NM_001011720,NM_014294	chr8,chr8	+,-	XKR9,TRAM1	66612,5770
chr6:119383678-119385006	chr6	+	119383843	119385037	True	NR_030315,NM_014034	chr6,chr6	-,+	MIR548B,ASF1A	5321,-168654
chr1:203053684-203054642	chr1	+	203053726	203054468	True	NM_015053,NM_002479	chr1,chr1	+,-	PPFIA4,MYOG	-33466,959
chr12:13250436-13250751	chr12	+	13250436	13250730	True	NM_001080555,NM_153823,NM_031289,NM_020853,NM_001080554	chr12,chr12,chr12,chr12,chr12	-,-,-,+,-	GSG1,GSG1,GSG1,KIAA1467,GSG1	5945,-1727,-1727,-53182,5945
chr4:16069480-16069790	chr4	+	16069479	16069831	True	NM_001145849,NM_001145850,NM_001145851,NM_001145852,NM_006017,NR_027696	chr4,chr4,chr4,chr4,chr4,chr4	-,-,-,-,-,+	PROM1,PROM1,PROM1,PROM1,PROM1,FLJ39653	7960,7960,7960,7960,7960,158454
chr22:42951741-42952279	chr22	+	42951813	42952265	True	NR_002184,NM_014509	chr22,chr22	-,+	RRP7B,SERHL2	25802,-1939
chr22:42951741-42952279	chr22	+	42898500	42898950	False	NR_027786,NM_015703	chr22,chr22	+,-	SERHL,RRP7A	-1966,16929
chr2:241632041-241632597	chr2	+	241632051	241632549	True	NM_198998,NM_001102467	chr2,chr2	+,-	AQP12A,AQP12B	-840,-9734
chr2:241632041-241632597	chr2	-	241621036	241621534	False	NM_198998,NM_001102467	chr2,chr2	+,-	AQP12A,AQP12B	9727,833
chr20:33467000-33467457	chr20	+	33467015	33467411	True	NM_178026,NR_028046,NM_018677,NM_001076552	chr20,chr20,chr20,chr20	-,+,+,+	GGT7,ACSS2,ACSS2,ACSS2	-6354,-4302,-2740,-2740
chr10:71386314-71387621	chr10	+	71386353	71387037	True	NM_020999,NM_145306	chr10,chr10	-,+	NEUROG3,C10orf35	-53143,2965
chr18:11851478-11852027	chr18	+	11851518	11851909	True	NM_023075,NM_020412	chr18,chr18	-,+	MPPE1,CHMP1B	56782,-180
chr15:75042486-75042773	chr15	+	75042629	75042769	True	NM_000499,NM_000761	chr15,chr15	-,+	CYP1A1,CYP1A2	-24752,-1496
chr2:201451870-201452085	chr2	+	201452019	201452127	True	NM_001159,NM_152387	chr2,chr2	+,-	AOX1,KCTD18	-1339,-77227
chr22:42827170-42827457	chr22	+	42827204	42827424	True	NR_027786,NM_145912	chr22,chr22	+,-	SERHL,NFAM1	69160,1027
chr14:95878517-95878886	chr14	+	95878521	95878853	True	NM_016417,NR_026779	chr14,chr14	+,-	GLRX5,C14orf139	122469,-2094
chr16:3306461-3306752	chr16	+	3306483	3306791	True	NR_033904,NM_001198536,NM_000243	chr16,chr16,chr16	+,-,-	FLJ39639,MEFV,MEFV	6976,-6,-6
chr17:45606861-45607461	chr17	+	45607135	45607240	True	NR_033934,NM_006310	chr17,chr17	-,+	MRPL45P2,NPEPPS	-37149,1203
chr17:45606861-45607461	chr17	-	36414577	36414664	False	NR_036750,NM_032351	chr17,chr17	-,+	LOC440434,MRPL45	-1321,38333
chr2:98350667-98351235	chr2	+	98350996	98351184	True	NM_005735,NM_207519	chr2,chr2	-,+	ACTR1B,ZAP70	-70435,-178
chr4:128802693-128803495	chr4	+	128802834	128803352	True	NM_001190801,NM_001190799,NM_152778,NM_014264	chr4,chr4,chr4,chr4	+,+,-,+	PLK4,PLK4,MFSD8,PLK4	-486,-869,83848,-869
chr3:49060416-49060972	chr3	+	49060503	49060929	True	NM_001009996,NM_199074,NM_199073,NR_029948,NM_199070,NM_000884,NR_029690,NM_018114,NM_199069	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,+,-,+,-,-,-,+	DALRD3,NDUFAF3,NDUFAF3,MIR425,NDUFAF3,IMPDH2,MIR191,DALRD3,NDUFAF3	-4486,-2646,-1936,-2836,-1480,5996,-2361,-2036,-1480
chr19:6989414-6990409	chr19	+	6989824	6990188	True	NR_024075,NM_001136507	chr19,chr19	-,+	EMR4P,MBD3L5	719,40405
chr13:49090073-49091145	chr13	+	49090264	49091183	True	NM_001268,NM_020377	chr13,chr13	-,+	RCBTB2,CYSLTR2	16184,189767
chr17:14142562-14143063	chr17	+	14142606	14142932	True	NM_001007530,NM_006041	chr17,chr17	-,+	CDRT15,HS3ST3B1	-2456,61573
chr17:14142562-14143063	chr17	-	13925042	13925292	False	NR_003261,NM_001007530	chr17,chr17	+,-	CDRT15P,CDRT15	2522,214916
chr14:98604104-98604611	chr14	+	98604221	98604574	True	NR_015430,NM_182560	chr14,chr14	-,+	C14orf64,C14orf177	-159760,573375
chr1:143744090-143744606	chr1	+	143744131	143744587	True	NR_033189,NR_027469,NR_027468	chr1,chr1,chr1	+,-,-	LOC100130000,LOC100286793,FLJ39739	-57052,50,-44
chr1:143744090-143744606	chr1	+	148176279	148176331	False	NM_001170755,NM_001164261	chr1,chr1	+,-	NBPF15,PPIAL4D	381856,26255
chr2:173421392-173422496	chr2	+	173421425	173422549	True	NR_026995,NM_002610	chr2,chr2	-,+	LOC91149,PDK1	178443,-697
chr14:98645088-98645669	chr14	+	98645252	98645641	True	NR_015430,NM_182560	chr14,chr14	-,+	C14orf64,C14orf177	-200791,532308
chr15:40825011-40825704	chr15	+	40825226	40825421	True	NR_002208,NM_152260	chr15,chr15	-,+	MRPL42P5,RPUSD2	-477,36115
chr6:127782385-127784125	chr6	+	127782604	127783855	True	NM_014702,NM_001010905	chr6,chr6	-,+	KIAA0408,C6orf58	-2069,114463
chr22:25425379-25425708	chr22	+	25425391	25425653	True	NM_001001663,NM_001145206	chr22,chr22	-,+	TMEM211,KIAA1671	-90077,-1501
chr1:99469696-99469980	chr1	+	99469809	99469921	True	NR_033940,NM_001037317,NM_001010861	chr1,chr1,chr1	+,-,-	LOC100129620,LPPR5,LPPR5	-28,578,578
chrX:48646784-48648032	chrX	+	48646812	48647899	True	NM_002049,NM_013271	chrX,chrX	+,-	GATA1,PCSK1N	-1881,46111
chr12:7454150-7455541	chr12	+	7454527	7455543	True	NM_174941,NM_001080454	chr12,chr12	-,+	CD163L1,ACSM4	141256,1384
chr5:161275390-161277232	chr5	+	161275421	161277172	True	NM_021911,NM_001127643,NM_001127645,NM_001127644,NM_001127647,NM_001127646,NM_001127648,NM_000806	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,+,+,+,+,+,+,+	GABRB2,GABRA1,GABRA1,GABRA1,GABRA1,GABRA1,GABRA1,GABRA1	-300291,-787,70,-532,219,4,530,-1275
chr4:1166574-1166985	chr4	+	1166853	1166919	True	NR_033339,NM_012445,NM_001128325	chr4,chr4,chr4	+,-,-	C4orf42,SPON2,SPON2	76308,-196,130
chr19:48774235-48774558	chr19	+	48774359	48774591	True	NM_001184904,NM_153608	chr19,chr19	-,+	CARD8,ZNF114	-15156,62
chr2:109405972-109407012	chr2	+	109406071	109406921	True	NM_144978,NM_022336	chr2,chr2	+,-	CCDC138,EDAR	-2910,198957
chr3:126236972-126237287	chr3	+	126237197	126237283	True	NM_152889,NM_001165974,NM_144639	chr3,chr3,chr3	+,-,-	CHST13,UROC1,UROC1	5892,-581,-581
chrY:25083435-25085325	chrY	+	25083752	25085141	True	NR_002178,NR_002177,NM_004081,NR_001525	chrY,chrY,chrY,chrY	+,+,-,+	TTTY4B,TTTY4C,DAZ1,TTTY4	-1201,-1201,260150,-1201
chrY:25083435-25085325	chrY	+	26717499	26718888	False	NR_002178,NM_020364,NR_002177,NR_001525	chrY,chrY,chrY,chrY	+,-,+,+	TTTY4B,DAZ3,TTTY4C,TTTY4	-1201,240803,-1201,-1201
chrY:25083435-25085325	chrY	-	27243499	27244888	False	NR_002178,NR_002177,NM_001005786,NR_001525	chrY,chrY,chrY,chrY	-,-,+,-	TTTY4B,TTTY4C,DAZ2,TTTY4	1201,1201,-263562,1201
chr3:10206871-10207367	chr3	+	10206895	10207111	True	NM_001570,NM_001164839	chr3,chr3	+,-	IRAK2,C3orf24	-383,-56980
chr20:60759268-60759680	chr20	+	60759434	60759558	True	NM_007232,NM_015666	chr20,chr20	-,+	HRH3,GTPBP5	35815,-1405
chr19:49994263-49994607	chr19	+	49994338	49994582	True	NR_001285,NR_026712,NR_000020,NR_000021,NM_012423,NR_000019,NR_000018,NM_001015,NR_029703	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,+,+,+,-	SNORD35B,RPL13AP5,SNORD33,SNORD32A,RPL13A,SNORD34,SNORD35A,RPS11,MIR150	6393,-3524,-515,-1166,-3524,-225,43,5051,9593
chr12:124017690-124018097	chr12	+	124017715	124018105	True	NR_037470,NM_178314	chr12,chr12	+,-	MIR3908,RILPL1	2850,210
chr12:8320709-8322505	chr12	+	8320803	8322504	True	NM_001004328,NR_036440	chr12,chr12	+,-	ZNF705A,POU5F1P3	2645,-33355
chr2:219858445-219858718	chr2	+	219858479	219858707	True	NM_057093,NM_057094,NM_017521,NR_024385,NR_029867,NM_005209	chr2,chr2,chr2,chr2,chr2,chr2	-,-,-,+,-,-	CRYBA2,CRYBA2,FEV,LOC151300,MIR375,CRYBA2	-352,-352,-8100,-17524,7773,-358
chr22:50050913-50051407	chr22	+	50050930	50051346	True	NR_026997,NM_014838	chr22,chr22	-,+	C22orf34,ZBED4	68,196150
chr16:16667635-16668192	chr16	+	16667815	16668193	True	NR_036447,NM_001079528	chr16,chr16	+,-	PKD1P1,ABCC6	-256407,-350487
chr16:16667635-16668192	chr16	-	18790902	18791010	False	NM_001019,NM_024847	chr16,chr16	-,+	RPS15A,TMC7	10696,204245
chrX:85578859-85579672	chrX	+	85578862	85579341	True	NM_001145414,NM_001139515	chrX,chrX	-,+	CHM,DACH2	-276296,-60942
chr17:73718979-73719331	chr17	+	73719012	73719364	True	NM_000154,NM_000213,NM_001005619,NM_001005731	chr17,chr17,chr17,chr17	-,+,+,+	GALK1,ITGB4,ITGB4,ITGB4	41966,-1554,1411,-1554
chr1:155177168-155177407	chr1	+	155177234	155177452	True	NM_002455,NM_198883,NM_007112	chr1,chr1,chr1	+,+,-	MTX1,MTX1,THBS3	1037,1037,288
chr3:136580975-136581176	chr3	+	136580990	136581216	True	NM_006153,NM_005862	chr3,chr3	+,-	NCK1,STAG1	1,-109745
chr7:27154843-27155061	chr7	+	27154854	27155092	True	NM_030661,NR_002795	chr7,chr7	-,+	HOXA3,HOXA11-AS1	4172,69934
chr9:91790702-91792047	chr9	+	91790788	91791989	True	NM_016848,NM_001827	chr9,chr9	-,+	SHC3,CKS2	1743,134123
chr17:61519382-61519874	chr17	+	61519445	61519793	True	NM_001017917,NM_001017916,NM_000789,NM_001915	chr17,chr17,chr17,chr17	-,-,+,-	CYB561,CYB561,ACE,CYB561	-1238,3802,34628,3979
chr11:114165936-114166237	chr11	+	114165935	114166065	True	NM_019021,NM_006169	chr11,chr11	-,+	C11orf71,NNMT	105124,469
chr9:112204179-112205341	chr9	+	112204205	112205351	True	NM_001145369,NM_001145370,NM_001037293	chr9,chr9,chr9	-,-,+	PTPN3,PTPN3,PALM2	8363,8363,197716
chr8:144947693-144947905	chr8	+	144947696	144947840	True	NM_000837,NM_031308	chr8,chr8	+,-	GRINA,EPPK1	116385,-262
chr11:74954193-74955115	chr11	+	74954224	74955130	True	NM_001195528,NR_029891	chr11,chr11	+,-	LOC441617,MIR326	-2325,91150
chr8:22134120-22134908	chr8	+	22134120	22134895	True	NM_001135721,NM_018068,NR_029714	chr8,chr8,chr8	+,+,-	PIWIL2,PIWIL2,MIR320A	-1091,-1361,-31564
chr1:236432657-236433392	chr1	+	236432696	236433438	True	NM_145861,NM_019891	chr1,chr1	+,-	EDARADD,ERO1LB	124241,11960
chr19:42722106-42723025	chr19	+	42722112	42722779	True	NM_133444,NM_133328	chr19,chr19	+,-	ZNF526,DEDD2	1712,-299
chr17:19651778-19652054	chr17	+	19651788	19652014	True	NM_000382,NM_001135168,NM_001135167,NM_000691	chr17,chr17,chr17,chr17	+,-,-,-	ALDH3A2,ALDH3A1,ALDH3A1,ALDH3A1	-99775,-3016,-2863,-42
chr10:23983425-23983823	chr10	+	23983446	23983704	True	NM_153714,NM_001098500	chr10,chr10	-,+	C10orf67,KIAA1217	-349674,-18
chr10:75574240-75574850	chr10	+	75574299	75574867	True	NM_015037,NM_003635	chr10,chr10	+,-	KIAA0913,NDST2	-28745,-2710
chr22:25372574-25372806	chr22	+	25372698	25372764	True	NM_001145206,NM_001001663	chr22,chr22	+,-	KIAA1671,TMEM211	51176,-37384
chr6:74172374-74172837	chr6	+	74172564	74172745	True	NM_001123226,NM_012123,NM_133645,NM_138441	chr6,chr6,chr6,chr6	+,+,+,-	MTO1,MTO1,MTO1,MB21D1	-1161,-1161,-1161,-10521
chr3:12838840-12840067	chr3	+	12839045	12840067	True	NM_012298,NM_001162499,NM_018306	chr3,chr3,chr3	+,+,-	CAND2,CAND2,TMEM40	-925,-925,-38237
chrX:85340884-85341357	chrX	+	85340913	85341295	True	NM_001145414,NM_001139514	chrX,chrX	-,+	CHM,DACH2	-38347,62159
chr10:44288041-44288686	chr10	+	44288126	44288542	True	NR_033923,NR_002726	chr10,chr10	+,-	C10orf136,HNRNPA3P1	52211,-2261
chr2:132918170-132918894	chr2	+	132918339	132918885	True	NM_001508,NR_027019	chr2,chr2	+,-	GPR39,ANKRD30BL	255261,690
chr1:221055770-221057517	chr1	+	221055792	221057439	True	NM_021958,NR_024236	chr1,chr1	+,-	HLX,LOC400804	-3100,452249
chr17:75282870-75283178	chr17	+	75282881	75283201	True	NM_001113492,NM_001113491,NR_036200	chr17,chr17,chr17	+,+,-	SEPT9,SEPT9,MIR4316	771,-5440,109985
chr12:4486396-4486687	chr12	+	4486396	4486531	True	NM_020638,NM_020375	chr12,chr12	-,+	FGF23,C12orf5	2420,-56089
chr5:128301694-128302175	chr5	+	128301700	128302212	True	NM_014031,NM_001999,NM_001017372	chr5,chr5,chr5	+,-,+	SLC27A6,FBN2,SLC27A6	-541,-427965,-538
chr3:9991612-9992550	chr3	+	9991664	9992540	True	NM_207351,NM_001077415	chr3,chr3	-,+	PRRT3,CRELD1	1588,-16190
chr18:61021706-61022112	chr18	+	61022002	61022167	True	NM_002035,NM_002639	chr18,chr18	-,+	KDSR,SERPINB5	12396,121976
chr12:76691767-76692553	chr12	+	76691828	76692315	True	NM_015336,NM_024685	chr12,chr12	+,-	ZDHHC17,BBS10	465538,49966
chr9:21994750-21995126	chr9	+	21994785	21995113	True	NR_003529,NM_058195	chr9,chr9	+,-	CDKN2B-AS1,CDKN2A	-46,-295
chrX:106452010-106452821	chrX	+	106452185	106452665	True	NM_001169154,NM_017681,NM_173494,NR_033676	chrX,chrX,chrX,chrX	+,-,+,-	CXorf41,NUP62CL,CXorf41,NUP62CL	-2380,-2515,-2380,-2515
chr1:89826918-89828265	chr1	+	89827240	89827879	True	NM_052942,NM_198460	chr1,chr1	-,+	GBP5,GBP6	-88696,1556
chr1:19599211-19599540	chr1	+	19599216	19599421	True	NM_001145289,NM_201252,NM_016183	chr1,chr1,chr1	-,-,+	AKR7L,AKR7L,MRTO4	1204,1204,-21192
chr18:8605471-8606113	chr18	+	8605627	8605963	True	NM_001025300,NR_024419	chr18,chr18	+,-	RAB12,LOC100192426	3479,-238595
chr6:36925653-36926451	chr6	+	36925764	36926320	True	NM_014341,NM_001199159,NM_153370	chr6,chr6,chr6	-,+,+	MTCH1,PI16,PI16	27679,-9776,-3606
chr16:57474413-57474730	chr16	+	57474548	57474754	True	NM_020313,NM_020312	chr16,chr16	-,+	CIAPIN1,COQ9	6665,6582
chr8:128467775-128468844	chr8	+	128467828	128468713	True	NM_001159542,NR_024393	chr8,chr8	+,-	POU5F1B,LOC727677	-40022,25721
chr3:172468010-172468346	chr3	+	172468020	172468314	True	NM_018098,NM_020792	chr3,chr3	+,-	ECT2,NCEH1	3983,-39012
chr18:44238222-44238648	chr18	+	44238365	44238543	True	NM_144612,NM_031303	chr18,chr18	-,+	LOXHD1,KATNAL2	-1369,288243
chr17:27917198-27917605	chr17	+	27917208	27917456	True	NM_001085454,NM_014030,NM_152345	chr17,chr17,chr17	-,-,+	GIT1,GIT1,ANKRD13B	-598,-598,3070
chr22:25412078-25412355	chr22	+	25412297	25412359	True	NM_001001663,NM_001145206	chr22,chr22	-,+	TMEM211,KIAA1671	-76983,11581
chr4:7046438-7047053	chr4	+	7046672	7047080	True	NM_153376,NM_152293,NR_033828	chr4,chr4,chr4	-,+,-	CCDC96,TADA2B,LOC100129931	-1944,-1567,928
chr5:115388972-115389227	chr5	+	115389109	115389265	True	NR_033363,NM_001195581	chr5,chr5	-,+	ATG12,LOC644100	-211561,-2004
chr8:99127470-99127912	chr8	+	99127638	99127957	True	NM_015029,NM_001145861,NM_001145860,NM_005836	chr8,chr8,chr8,chr8	+,+,+,-	POP1,POP1,POP1,HRSP12	2110,1563,1563,1511
chr15:60924150-60924395	chr15	+	60924149	60924315	True	NM_012182,NM_002943,NM_134260	chr15,chr15,chr15	+,-,-	FOXB1,RORA,RORA	-627780,-4420,-4420
chr14:77428380-77429304	chr14	+	77428483	77429099	True	NM_194287,NM_024496,NM_033426	chr14,chr14,chr14	+,-,+	C14orf166B,IRF2BPL,KIAA1737	-135810,65985,135478
chr6:109808324-109809177	chr6	+	109808595	109809207	True	NM_014797,NM_003080,NM_001164313	chr6,chr6,chr6	-,+,-	ZBTB24,SMPD2,ZBTB24	-4155,-46716,-4155
chr5:34695162-34696334	chr5	+	34695307	34695973	True	NR_026591,NM_001145523	chr5,chr5	-,+	RAD1,RAI14	219808,-7694
chr16:68345691-68346216	chr16	+	68345693	68345856	True	NM_032178,NM_019023,NM_001184824	chr16,chr16,chr16	-,+,+	SLC7A6OS,PRMT7,PRMT7	-825,-868,-868
chr6:110535174-110536921	chr6	+	110535173	110536878	True	NM_003931,NM_015891	chr6,chr6	-,+	WASF1,CDC40	-33966,-33600
chr15:25491220-25491899	chr15	+	25491225	25491873	True	NR_003353,NR_003358,NM_130838,NR_003344,NR_003352,NR_003351,NR_003357,NR_003356,NR_003355,NR_003354,NR_003302,NR_003303,NR_003359	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,-,+,+,+,+,+,+,+,+,+,+	SNORD115-38,SNORD115-43,UBE3A,SNORD115-29,SNORD115-37,SNORD115-36,SNORD115-42,SNORD115-41,SNORD115-40,SNORD115-39,SNORD115-10,SNORD115-11,SNORD115-44	-6291,2471,158830,2471,-8143,2471,618,-651,-2515,-4383,618,2471,4132
chr14:88741210-88741823	chr14	+	88741227	88741875	True	NM_001040428,NM_138318	chr14,chr14	+,-	SPATA7,KCNK10	110112,-3972
chr11:22645394-22646583	chr11	+	22645730	22646581	True	NM_001143830,NM_022725	chr11,chr11	+,-	GAS2,FANCF	41578,856
chrX:24072545-24072773	chrX	+	24072686	24072760	True	NM_030624,NM_001415	chrX,chrX	-,+	KLHL15,EIF2S3	-27383,304
chrX:49056125-49056374	chrX	+	49056224	49056290	True	NM_002668,NM_003179	chrX,chrX	+,-	PLP2,SYP	-28091,421
chr19:48308963-48309401	chr19	+	48308985	48309188	True	NM_198479,NM_000554	chr19,chr19	-,+	TPRX1,CRX	-2124,15910
chr7:16500900-16502283	chr7	+	16500956	16502303	True	NM_001195280,NM_015464	chr7,chr7	+,-	LOC100506049,SOSTDC1	64201,3221
chrX:53349055-53349398	chrX	+	53349136	53349429	True	NM_001111125,NM_144968	chrX,chrX	-,+	IQSEC2,RIBC1	1143,100409
chr6:45341446-45342663	chr6	+	45341680	45342473	True	NM_003599,NM_001024630,NM_181356	chr6,chr6,chr6	-,+,-	SUPT3H,RUNX2,SUPT3H	3153,-45678,3248
chr3:96553751-96554510	chr3	+	96553953	96554483	True	NM_001042533,NM_001080448	chr3,chr3	-,+	MINA,EPHA6	1136803,-20585
chr21:29911753-29912529	chr21	+	29911766	29912560	True	NM_013240,NR_026552,NR_026553	chr21,chr21,chr21	-,+,+	N6AMT1,NCRNA00161,NCRNA00161	345183,-177,-177
chr17:48249704-48250418	chr17	+	48250012	48250467	True	NR_024192,NR_024193,NM_001135697,NM_000023	chr17,chr17,chr17,chr17	-,-,+,+	HILS1,HILS1,SGCA,SGCA	-175,-175,-6697,-6697
chr16:11924434-11925747	chr16	+	11924944	11925776	True	NR_024050,NM_001192,NR_024049	chr16,chr16,chr16	-,+,-	BCAR4,TNFRSF17,BCAR4	-2255,133187,-2255
chr1:116204369-116205498	chr1	+	116204611	116205410	True	NM_001232,NM_001172412	chr1,chr1	-,+	CASQ2,VANGL1	106078,-19412
chr13:99635089-99636164	chr13	+	99635225	99635819	True	NM_001144072,NM_001130050,NM_001130048	chr13,chr13,chr13	+,-,-	UBAC2,DOCK9,DOCK9	216859,-4887,-4887
chr22:21387673-21387966	chr22	+	21387745	21387967	True	NM_004173,NR_027006	chr22,chr22	-,+	SLC7A4,LOC400891	-898,12281
chr7:128315738-128316164	chr7	+	128315737	128316045	True	NM_001708,NM_001012454,NM_001128926	chr7,chr7,chr7	-,+,+	OPN1SW,FAM71F2,FAM71F2	99859,-3442,-3442
chr7:134141244-134142979	chr7	+	134141384	134142997	True	NM_001628,NM_020299	chr7,chr7	-,+	AKR1B1,AKR1B10	941,69346
chr7:27223856-27224062	chr7	+	27223860	27224069	True	NM_005523,NM_018951,NR_037940,NR_002795,NM_153715,NR_037939	chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,+,-,-	HOXA11,HOXA10,HOXA10-HOXA9,HOXA11-AS1,HOXA10,HOXA10	816,-9905,-3980,957,-3984,-3980
chr2:46771134-46771583	chr2	+	46771223	46771492	True	NM_080653,NM_012249	chr2,chr2	-,+	ATP6V1E2,RHOQ	-24127,-1407
chr17:46123921-46124723	chr17	+	46124075	46124675	True	NM_003204,NR_029687,NM_016429	chr17,chr17,chr17	+,-,-	NFE2L1,MIR152,COPZ2	1010,-9462,-8923
chr7:56231110-56231312	chr7	+	56231172	56231312	True	NM_015411,NM_001145712	chr7,chr7	+,-	SUMF2,LOC389493	-99306,-47082
chr2:201680126-201681305	chr2	+	201680149	201680998	True	NM_001162407,NM_014670	chr2,chr2	-,+	CLK1,BZW1	48344,-3560
chr3:185827135-185827774	chr3	+	185827140	185827769	True	NR_033752,NM_004454	chr3,chr3	+,-	LOC344887,ETV5	-140935,-239
chr13:43170003-43170470	chr13	+	43170152	43170498	True	NM_003701,NM_001002264	chr13,chr13	+,-	TNFSF11,EPSTI1	-21916,395929
chr9:140101743-140102316	chr9	+	140101744	140102304	True	NM_001144028,NM_001128228,NM_001144026,NM_001144027,NM_053045,NM_014434	chr9,chr9,chr9,chr9,chr9,chr9	+,-,+,+,-,+	NDOR1,TPRN,NDOR1,NDOR1,TMEM203,NDOR1	-1676,-6581,-1676,-1676,-1654,-1676
chr8:81073152-81074122	chr8	+	81073454	81073907	True	NM_005079,NM_001025253,NM_001105539	chr8,chr8,chr8	-,-,+	TPD52,TPD52,ZBTB10	9986,9986,324540
chr6:108395629-108395845	chr6	+	108395694	108395864	True	NM_003269,NM_014028	chr6,chr6	+,-	NR2E1,OSTM1	91350,127
chr20:13765184-13765689	chr20	+	13765317	13765661	True	NM_001039375,NR_029377,NM_024120,NM_016649	chr20,chr20,chr20,chr20	+,+,+,-	C20orf7,C20orf7,C20orf7,ESF1	10,10,10,-33
chr17:40809922-40811350	chr17	+	40809983	40811329	True	NM_024927,NM_016437	chr17,chr17	-,+	PLEKHH3,TUBG2	17769,-64
chr13:41634894-41635214	chr13	+	41634909	41635231	True	NM_172373,NM_007187	chr13,chr13	-,+	ELF1,WBP4	-41401,465
chr15:25488714-25489025	chr15	+	25488725	25488909	True	NR_003344,NR_003358,NM_130838,NR_003353,NR_003352,NR_003351,NR_003350,NR_003357,NR_003356,NR_003355,NR_003354,NR_003302,NR_003303,NR_003359	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,-,+,+,+,+,+,+,+,+,+,+,+	SNORD115-29,SNORD115-43,UBE3A,SNORD115-38,SNORD115-37,SNORD115-36,SNORD115-35,SNORD115-42,SNORD115-41,SNORD115-40,SNORD115-39,SNORD115-10,SNORD115-11,SNORD115-44	5435,5435,161794,-3791,-5643,5435,-9382,3582,1715,-15,-1883,3582,5435,7096
chr15:49255144-49255362	chr15	+	49255223	49255317	True	NM_014335,NM_203349	chr15,chr15	+,-	EID1,SHC4	-84985,374
chr19:4518713-4519236	chr19	+	4518754	4519278	True	NM_032631,NM_001080400	chr19,chr19	+,-	HDGFRP2,PLIN4	-46550,-1038
chr6:86304028-86304241	chr6	+	86304134	86304282	True	NM_153816,NM_002526,NM_020468	chr6,chr6,chr6	-,+,-	SNX14,NT5E,SNX14	-505,-144883,-505
chr16:71791208-71793081	chr16	+	71791824	71793033	True	NR_003059,NM_001137675	chr16,chr16	-,+	SNORD71,ATXN1L	4,86865
chr21:33782968-33783826	chr21	+	33782977	33783839	True	NM_058187,NM_014825	chr21,chr21	+,-	C21orf63,URB1	912,-17665
chr12:53341803-53342141	chr12	+	53341806	53342114	True	NM_199187,NM_000224,NM_002273	chr12,chr12,chr12	+,+,-	KRT18,KRT18,KRT8	540,728,-42938
chr16:31086154-31086777	chr16	+	31086306	31086621	True	NM_001172669,NM_001172670,NM_024706,NM_001172668,NM_014699	chr16,chr16,chr16,chr16,chr16	-,-,-,-,+	ZNF668,ZNF668,ZNF668,ZNF668,ZNF646	-9897,-9897,-665,-1483,-614
chr4:89511632-89511852	chr4	+	89511743	89511897	True	NM_032906,NM_014606	chr4,chr4	-,+	PIGY,HERC3	-66788,1749
chr3:112356129-112357210	chr3	+	112356244	112357252	True	NM_017945,NM_199511,NM_199512	chr3,chr3,chr3	+,-,-	SLC35A5,CCDC80,CCDC80	-75401,2775,2775
chr20:55967723-55967960	chr20	+	55967764	55967910	True	NM_183425,NM_001190472,NM_017495	chr20,chr20,chr20	+,-,+	RBM38,MTRNR2L3,RBM38	-1352,-32886,-1352
chr9:127018351-127019705	chr9	+	127018355	127019408	True	NM_002799,NM_014397,NM_001145001,NM_001166168,NM_001166167	chr9,chr9,chr9,chr9,chr9	-,+,+,+,+	PSMB7,NEK6,NEK6,NEK6,NEK6	158364,787,787,1121,476
chr22:31795942-31796188	chr22	+	31795996	31796226	True	NM_032051,NM_004147	chr22,chr22	-,+	PATZ1,DRG1	-53747,-510
chr19:2783070-2783288	chr19	+	2783086	2783284	True	NM_003249,NM_003021	chr19,chr19	+,-	THOP1,SGTA	2221,120
chr1:12912287-12913894	chr1	+	12912500	12913932	True	NM_001013631,NM_023014,NM_001146181	chr1,chr1,chr1	-,+,-	HNRNPCL1,PRAMEF2,LOC649330	-3922,3008,-4263
chr2:217496672-217497787	chr2	+	217496741	217497757	True	NM_000597,NM_000599	chr2,chr2	+,-	IGFBP2,IGFBP5	369,62566
chr12:50505889-50506092	chr12	+	50505907	50506021	True	NM_032901,NM_147190,NM_005276	chr12,chr12,chr12	+,-,+	C12orf62,LASS5,GPD1	-58,55126,-8157
chr1:160772227-160773344	chr1	+	160772296	160773159	True	NM_002348,NM_001166663,NM_001033667	chr1,chr1,chr1	+,-,+	LY9,CD244,LY9	-6425,59591,-6425
chr8:28377474-28378195	chr8	+	28377796	28378234	True	NR_036250,NM_145866	chr8,chr8	-,+	MIR4288,FZD3	-15097,-26136
chr17:20620601-20621880	chr17	+	20620726	20621603	True	NM_001190790,NM_001004306	chr17,chr17	+,-	CDRT15L2,CCDC144NL	-137740,177906
chr1:11993454-11993844	chr1	+	11993517	11993626	True	NM_000302,NM_138346	chr1,chr1	+,-	PLOD1,KIAA2013	1097,-7032
chr9:69655627-69657361	chr9	+	69655707	69657083	True	NM_001085457,NR_024443	chr9,chr9	-,+	CBWD6,LOC100133920	-393114,-4397
chr9:69655627-69657361	chr9	-	42852265	42853641	False	NR_026759,NR_026558	chr9,chr9	-,+	FAM95B1,AQP7P3	179721,4510
chr9:69655627-69657361	chr9	-	67025252	67026628	False	NR_024443,NR_024496	chr9,chr9	-,+	LOC100133920,LOC442421	4404,-531034
chr9:69655627-69657361	chr9	+	67293755	67295131	False	NM_032250,NR_002817	chr9,chr9	+,-	ANKRD20A1,AQP7P1	631629,-4263
chr17:74553803-74554159	chr17	+	74553873	74554141	True	NM_134268,NR_004396,NR_004397,NR_004395	chr17,chr17,chr17,chr17	-,+,+,+	CYGB,SNORD1B,SNORD1C,SNORD1A	-20091,3048,732,3573
chr6:144384518-144384994	chr6	+	144384638	144384844	True	NM_001080951,NM_001080955,NM_003764	chr6,chr6,chr6	-,-,+	PLAGL1,PLAGL1,STX11	941,941,86809
chr8:17653239-17654329	chr8	+	17653755	17654181	True	NM_006197,NM_001001925,NM_001001924	chr8,chr8,chr8	+,-,-	PCM1,MTUS1,MTUS1	126184,4301,4301
chr6:99959322-99960624	chr6	+	99960140	99960640	True	NM_001080481,NM_001195131	chr6,chr6	-,+	USP45,LOC100130890	2668,8229
chr22:24892138-24892425	chr22	+	24892386	24892474	True	NR_028483,NR_028484,NM_016327	chr22,chr22,chr22	-,-,+	C22orf45,C22orf45,UPB1	-1603,-1603,-1189
chr17:30088798-30089441	chr17	+	30088798	30088950	True	NM_018405,NM_015355	chr17,chr17	-,+	C17orf79,SUZ12	97426,175093
chr2:10956505-10957704	chr2	+	10956741	10957611	True	NM_005742,NM_144583,NM_002236	chr2,chr2,chr2	-,+,+	PDIA6,ATP6V1C2,KCNF1	-3781,-95017,94451
chr17:79374363-79374612	chr17	+	79374409	79374651	True	NM_001080519,NR_036152	chr17,chr17	+,-	BAHCC1,MIR3186	-920,43613
chr16:75151660-75152876	chr16	+	75152432	75152650	True	NM_153486,NM_194436,NM_153688	chr16,chr16,chr16	-,-,+	LDHD,LDHD,ZFP1	-1762,-1762,29770
chr12:130648846-130649115	chr12	+	130648852	130649160	True	NR_033834,NM_007197	chr12,chr12	-,+	FLJ31485,FZD10	-2629,-1899
chr1:185715357-185716745	chr1	+	185715367	185716794	True	NM_006469,NM_031935	chr1,chr1	-,+	IVNS1ABP,HMCN1	-428906,-11741
chr10:99473754-99473970	chr10	+	99473802	99474010	True	NR_026754,NM_031484	chr10,chr10	-,+	LOC100270710,MARVELD1	3942,-388
chr11:130785753-130785953	chr11	+	130785764	130785848	True	NM_001048209,NM_014758	chr11,chr11	+,-	NTM,SNX19	454522,584
chrX:40599217-40599451	chrX	+	40599328	40599460	True	NM_004229,NM_001195522	chrX,chrX	-,+	MED14,LOC347411	-4524,-116570
chr19:14185560-14185810	chr19	+	14185705	14185831	True	NR_024282,NM_138352	chr19,chr19	+,-	LOC113230,SAMD1	-1935,15451
chr1:236029670-236029897	chr1	+	236029670	236029870	True	NM_000081,NM_003272	chr1,chr1	-,+	LYST,GPR137B	400,275961
chr6:26218827-26220052	chr6	+	26219238	26220092	True	NM_003532,NM_003518,NM_021052	chr6,chr6,chr6	+,-,+	HIST1H3E,HIST1H2BG,HIST1H2AE	5290,-2366,-2141
chr11:93584280-93584487	chr11	+	93584279	93584359	True	NM_001144871,NM_004268	chr11,chr11	-,+	C11orf90,MED17	-611,-66925
chr14:71777506-71778222	chr14	+	71777586	71778250	True	NR_001276,NM_033141	chr14,chr14	+,-	SNORD56B,MAP3K9	86803,-501698
chr3:47956390-47956765	chr3	+	47956411	47956603	True	NR_031595,NM_003074	chr3,chr3	+,-	MIR1226,SMARCC1	-65418,-133006
chr16:66637782-66638180	chr16	+	66637787	66638111	True	NM_181553,NM_144601,NR_037619,NM_004614,NR_037613	chr16,chr16,chr16,chr16,chr16	+,+,+,-,+	CMTM3,CMTM3,CMTM3,TK2,CMTM3	455,116,522,-53472,9
chr13:44542875-44543305	chr13	+	44542901	44543239	True	NM_144974,NR_026955	chr13,chr13	-,+	CCDC122,NCRNA00284	-89075,53231
chr13:44542875-44543305	chr11	+	46389273	46389577	False	NM_000741,NM_001105540	chr11,chr11	-,+	CHRM4,DGKZ	18834,-6433
chr4:170926117-170927557	chr4	+	170926161	170927105	True	NM_001009554,NM_173872	chr4,chr4	-,+	MFAP3L,CLCN3	-1226,-384491
chr19:10221127-10221786	chr19	+	10221130	10221694	True	NM_002566,NM_031917,NM_003755,NM_001198690,NR_003688,NR_004381,NM_001040664,NM_020230	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,-,+,+,+,+,+	P2RY11,ANGPTL6,EIF3G,PPAN-P2RY11,SNORD105B,SNORD105,PPAN-P2RY11,PPAN	502,-7705,8955,-4282,-756,-2854,-4282,-4282
chr3:193266456-193268360	chr3	+	193266459	193267996	True	NM_032279,NM_015560	chr3,chr3	-,+	ATP13A4,OPA1	4759,42936
chr12:98909206-98909472	chr12	+	98909231	98909511	True	NM_001032284,NM_001032283,NR_027157,NM_003276	chr12,chr12,chr12,chr12	+,+,-,+	TMPO,TMPO,LOC100128191,TMPO	25,25,543,25
chr19:37823158-37824286	chr19	+	37823435	37824326	True	NM_181786,NR_029390	chr19,chr19	+,-	HKR1,LOC284412	1253,-63523
chrX:72434119-72434446	chrX	+	72434254	72434456	True	NM_021963,NM_001042506	chrX,chrX	-,+	NAP1L2,PABPC1L2B	304,-210953
chr12:9818888-9819535	chr12	+	9819019	9819355	True	NM_001197317,NM_002258,NM_001197318,NM_001197319,NM_013269,NR_036693,NM_001004419	chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,-,+,+,+,+,+	CLEC2D,KLRB1,CLEC2D,CLEC2D,CLEC2D,CLEC2D,CLEC2D	2975,-58522,2952,2975,2952,2952,2953
chr17:27039092-27039329	chr17	+	27039144	27039378	True	NR_024575,NR_024579,NM_000984,NM_152465,NM_001144943,NR_000013,NM_001142625,NM_001144942,NM_001142624,NM_031934	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,-,-,+,-,-,-,-	RAB34,RAB34,RPL23A,PROCA1,RAB34,SNORD42B,RAB34,RAB34,RAB34,RAB34	5923,5923,7621,-272,5958,8189,5958,5580,5958,5580
chr5:750494-750785	chr5	+	750548	750682	True	NM_018140,NM_007030	chr5,chr5	+,-	CEP72,TPPP	-138194,-57038
chr8:73470679-73471538	chr8	+	73470726	73471324	True	NM_004770,NR_033867	chr8,chr8	+,-	KCNB2,LOC392232	-21157,-306857
chr6:26518174-26519435	chr6	+	26518866	26519242	True	NR_026790,NM_024639	chr6,chr6	+,-	HCG11,ZNF322A	2691,140779
chr14:53019988-53020203	chr14	+	53019997	53020203	True	NM_020784,NM_001160047,NM_001099652	chr14,chr14,chr14	-,-,+	TXNDC16,TXNDC16,GPR137C	-696,-696,-182
chr1:44679521-44680077	chr1	+	44679594	44680122	True	NM_019100,NM_001034023,NM_001034024,NM_024066	chr1,chr1,chr1,chr1	+,+,+,-	DMAP1,DMAP1,DMAP1,ERI3	-520,-520,-520,140867
chr19:6375491-6375939	chr19	+	6375497	6375887	True	NM_004158,NM_032306	chr19,chr19	-,+	PSPN,ALKBH7	23,-3104
chr12:79349202-79350920	chr12	+	79349293	79350902	True	NM_001135806,NM_002583	chr12,chr12	+,-	SYT1,PAWR	88530,733938
chr4:73433546-73433786	chr4	+	73433569	73433751	True	NM_053036,NM_014243	chr4,chr4	+,-	NPFFR2,ADAMTS3	-528771,815
chr9:80628401-80629444	chr9	+	80628525	80629199	True	NM_001098802,NM_002072	chr9,chr9	+,-	CEP78,GNAQ	221791,17082
chr1:119532399-119532619	chr1	+	119532439	119532651	True	NM_001005783,NM_152380	chr1,chr1	+,-	HAO2,TBX15	378750,-260
chr4:88141913-88142469	chr4	+	88141971	88142259	True	NM_020803,NM_024047	chr4,chr4	-,+	KLHL8,NUDT9	-297,201475
chr17:10561345-10561736	chr17	+	10561351	10561659	True	NM_002470,NM_020233	chr17,chr17	-,+	MYH3,C17orf48	-1886,39267
chr2:62419728-62421525	chr2	+	62419744	62421118	True	NM_006430,NM_006577	chr2,chr2	-,+	CCT4,B3GNT2	-303953,2143
chr1:181057544-181057751	chr1	+	181057546	181057708	True	NM_016545,NM_005819	chr1,chr1	+,-	IER5,STX6	15,-65500
chr3:49458981-49459302	chr3	+	49459016	49459330	True	NR_028435,NM_022171,NM_000481,NM_001664,NM_032316,NM_001164712,NM_001164710,NM_001164711	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-,-,-	AMT,TCTA,AMT,RHOA,NICN1,AMT,AMT,AMT	831,-9428,831,-9490,7477,831,831,831
chr3:184037662-184038773	chr3	+	184037720	184038810	True	NM_004953,NM_198244,NM_198242,NM_198241,NM_001194946,NM_001194947,NM_001171087,NR_003055,NM_182917	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,+,+,-,+,+	EIF4G1,EIF4G1,EIF4G1,EIF4G1,EIF4G1,EIF4G1,CLCN2,SNORD66,EIF4G1	-132,-5488,-5488,-5488,-5488,-5488,40631,4673,-4819
chr6:74105259-74105776	chr6	+	74105365	74105603	True	NM_001080507,NM_018665	chr6,chr6	-,+	OOEP,DDX43	-25850,-1138
chrX:130038974-130039814	chrX	+	130039164	130039860	True	NM_144967,NM_182314,NM_006375	chrX,chrX,chrX	+,-,-	ARHGAP36,ENOX2,ENOX2	152355,-1956,-1956
chr1:26632848-26633308	chr1	+	26632878	26633284	True	NM_001803,NM_183008,NM_001077262	chr1,chr1,chr1	+,-,-	CD52,UBXN11,UBXN11	11126,3,3
chr6:134668788-134670166	chr6	+	134669136	134670194	True	NM_004865,NM_001143676	chr6,chr6	+,-	TBPL1,SGK1	-394887,-29940
chr12:54521829-54522417	chr12	+	54521851	54522366	True	NR_026656,NR_026658	chr12,chr12	+,-	LOC400043,LOC100240735	-2047,-46244
chr2:196418037-196419196	chr2	+	196418058	196419094	True	NM_001127257,NM_018897	chr2,chr2	+,-	SLC39A10,DNAH7	102437,514506
chr9:133450574-133452278	chr9	+	133450994	133451999	True	NR_027440,NM_003934	chr9,chr9	-,+	LOC100272217,FUBP3	2945,2960
chr22:39437722-39438784	chr22	+	39438112	39438738	True	NM_145298,NM_001006666,NM_175709	chr22,chr22,chr22	+,+,-	APOBEC3F,APOBEC3F,CBX7	-1490,-1490,109850
chr19:44098705-44098949	chr19	+	44098883	44098959	True	NM_001007561,NM_024327,NM_001145347	chr19,chr19,chr19	-,+,+	IRGQ,ZNF576,ZNF576	1378,1584,1778
chr12:8087970-8088401	chr12	+	8088103	8088436	True	NM_006931,NM_018416	chr12,chr12	-,+	SLC2A3,FOXJ2	507,96922
chr14:64013673-64014514	chr14	+	64014055	64014266	True	NM_006246,NM_015180	chr14,chr14	-,+	PPP2R5E,SYNE2	-3976,305416
chr1:17444753-17445281	chr1	+	17444926	17445296	True	NM_007365,NM_013358	chr1,chr1	-,+	PADI2,PADI1	702,86324
chr6:6608055-6608761	chr6	+	6608308	6608775	True	NM_004271,NR_026970	chr6,chr6	+,-	LY86,LY86-AS1	-19429,14340
chr18:11750991-11751205	chr18	+	11751012	11751202	True	NM_023075,NM_001142339,NM_002071	chr18,chr18,chr18	-,+,+	MPPE1,GNAL,GNAL	157489,359,359
chr4:21306075-21307269	chr4	+	21306167	21307305	True	NM_145048,NM_147183	chr4,chr4	+,-	PACRGL,KCNIP4	-604183,-638
chr16:89985989-89986301	chr16	+	89986007	89986299	True	NM_002386,NM_145039,NM_001197181,NM_006086	chr16,chr16,chr16,chr16	+,-,+,+	MC1R,CENPBD1,TUBB3,TUBB3	-1771,52991,2117,3387
chr20:45337545-45338081	chr20	+	45337549	45337901	True	NM_030777,NM_033550	chr20,chr20	+,-	SLC2A10,TP53RK	377,-19273
chr14:50154508-50154894	chr14	+	50154699	50154943	True	NM_172193,NM_001197330,NM_001197331,NM_002692	chr14,chr14,chr14,chr14	+,-,-,-	KLHDC1,POLE2,POLE2,POLE2	4879,205,205,205
chr10:75679285-75680426	chr10	+	75679375	75680258	True	NM_002658,NM_001001791,NM_001145031	chr10,chr10,chr10	+,-,+	PLAU,C10orf55,PLAU	-8566,2327,-8566
chr17:30770375-30770979	chr17	+	30770375	30770957	True	NM_002815,NM_022344	chr17,chr17	+,-	PSMD11,C17orf75	544,-101186
chr20:50807674-50807914	chr20	+	50807706	50807766	True	NM_173485,NM_018197,NM_199426,NM_022088,NM_199427	chr20,chr20,chr20,chr20,chr20	+,-,-,-,-	TSHZ2,ZFP64,ZFP64,ZFP64,ZFP64	781179,808,808,808,808
chr6:109777113-109777347	chr6	+	109777113	109777379	True	NM_001159291,NM_022765,NM_003080	chr6,chr6,chr6	-,-,+	MICAL1,MICAL1,SMPD2	67,67,-15233
chr15:80266561-80267517	chr15	+	80266836	80267414	True	NM_001114735,NR_028330,NM_004049	chr15,chr15,chr15	-,+,-	BCL2A1,C15orf37,BCL2A1	-3193,-51784,-3193
chr2:203736992-203737295	chr2	+	203737115	203737210	True	NM_138468,NM_001104586,NM_178231	chr2,chr2,chr2	-,+,-	ICA1L,ALS2CR8,ICA1L	-744,39767,-920
chr7:30544941-30546042	chr7	+	30545038	30545947	True	NR_037669,NM_001199815,NM_001199817,NM_001199816,NM_024051,NM_002047	chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,+	GGCT,GGCT,GGCT,GGCT,GGCT,GARS	-581,-581,-581,-581,-581,88233
chr12:124153321-124153857	chr12	+	124153344	124153659	True	NM_001414,NM_024809,NM_001143850	chr12,chr12,chr12	-,+,+	EIF2B1,TCTN2,TCTN2	-35021,2000,2000
chr9:106856790-106857049	chr9	+	106856880	106857004	True	NM_001001919,NM_006444,NM_001042551,NM_001042550	chr9,chr9,chr9,chr9	-,+,+,+	OR13C4,SMC2,SMC2,SMC2	432538,-391,-391,-101
chr19:48971144-48971848	chr19	+	48971454	48971576	True	NM_017457,NM_004228,NM_001080434,NM_170720	chr19,chr19,chr19,chr19	+,+,-,+	CYTH2,CYTH2,LMTK3,KCNJ14	888,888,44920,-6999
chr10:21825144-21826317	chr10	+	21825159	21826144	True	NM_004641,NM_001195628,NM_001195630,NM_207371,NM_001195626,NM_001195627	chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,-,+,+	MLLT10,MLLT10,MLLT10,C10orf140,MLLT10,MLLT10	-2109,-2109,-2109,-10548,-1636,-2109
chr19:43244227-43244648	chr19	+	43244565	43244631	True	NR_036584,NM_021016	chr19,chr19	+,-	LOC100289650,PSG3	81383,87
chr7:44795822-44796075	chr7	+	44795948	44796108	True	NM_174929,NM_031449,NM_138635	chr7,chr7,chr7	+,+,-	ZMIZ2,ZMIZ2,H2AFV	-212,-7469,91667
chr19:57130702-57131597	chr19	+	57130724	57131461	True	NM_001193628,NM_001005850	chr19,chr19	+,-	LOC147670,ZNF835	23065,52835
chr13:114452824-114454749	chr13	+	114452846	114454624	True	NM_182614,NR_028064	chr13,chr13	+,-	FAM70B,LOC100130386	7591,-512
chr7:2352623-2353083	chr7	+	2352821	2352887	True	NM_001037283,NM_013321	chr7,chr7	+,-	EIF3B,SNX8	41586,1262
chr14:63489811-63490849	chr14	+	63489943	63490466	True	NM_139318,NM_020663	chr14,chr14	-,+	KCNH5,RHOJ	21548,180678
chr15:66999960-67000163	chr15	+	66999990	67000210	True	NM_005585,NM_001142861,NM_207338,NR_027654	chr15,chr15,chr15,chr15	+,+,-,+	SMAD6,SMAD6,LCTL,SMAD6	-5367,719,-142155,-5367
chr17:47287929-47288130	chr17	+	47287933	47288061	True	NM_016428,NM_001198756,NM_001198755,NM_001198754,NM_001135186,NM_031498	chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,-,+,-	ABI3,GNGT2,GNGT2,GNGT2,ABI3,GNGT2	-395,-1171,-1171,3,-395,-1190
chr6:14884820-14885369	chr6	+	14884825	14885371	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	361155,777968
chr9:100152846-100153473	chr9	+	100152882	100153494	True	NR_026847,NM_014290	chr9,chr9	-,+	LOC286359,TDRD7	5529,20807
chr2:131328464-131328675	chr2	+	131328496	131328708	True	NR_027313,NR_033930,NR_027314	chr2,chr2,chr2	+,+,+	LOC150527,LOC646743,LOC150527	-128,-145,-125
chr2:131328464-131328675	chr2	-	131307181	131307393	False	NR_027313,NR_033930,NR_027314	chr2,chr2,chr2	-,-,-	LOC150527,LOC646743,LOC150527	128,145,125
chr14:24458297-24458686	chr14	+	24458551	24458695	True	NR_023922,NM_198083	chr14,chr14	-,+	C14orf167,DHRS4L2	-34253,-575
chr15:69102088-69103118	chr15	+	69102102	69103014	True	NR_031680,NR_026808,NR_036197	chr15,chr15,chr15	+,-,-	MIR548H4,C15orf28,MIR4312	13288,-2662,-7838
chrX:150861404-150862277	chrX	+	150861572	150862208	True	NR_029973,NR_033262,NM_024082	chrX,chrX,chrX	-,+,+	MIR452,PRRG3,PRRG3	266026,4570,1521
chrX:114525909-114526645	chrX	+	114526001	114526694	True	NM_016383,NM_020871	chrX,chrX	+,-	LUZP4,LRCH2	-1760,-57366
chr12:110339214-110340191	chr12	+	110339216	110339876	True	NM_032300,NM_016433,NM_001143852	chr12,chr12,chr12	+,-,+	TCHP,GLTP,TCHP	-944,-20923,-1188
chr1:48461557-48462152	chr1	+	48461606	48462048	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	564,226308
chr19:37656186-37657380	chr19	+	37656431	37656912	True	NM_152655,NM_152604,NM_199126	chr19,chr19,chr19	-,+,-	ZNF585A,ZNF383,ZNF585A	6761,60453,6479
chr22:19930070-19931020	chr22	+	19930077	19930872	True	NM_006440,NM_001135161,NM_000754,NM_001135162	chr22,chr22,chr22,chr22	-,+,+,+	TXNRD2,COMT,COMT,COMT	-718,7587,-865,8172
chr12:123459927-123460157	chr12	+	123459997	123460155	True	NM_203444,NM_024623,NM_018694,NM_001002251,NM_001002252,NM_019625,NM_019624,NM_016638	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,+,+,-,-,+	ABCB9,OGFOD2,ARL6IP4,ARL6IP4,ARL6IP4,ABCB9,ABCB9,ARL6IP4	-245,-694,4724,4724,4724,-8941,-8941,4724
chr14:69679634-69680471	chr14	+	69679716	69679987	True	NM_003861,NR_034165	chr14,chr14	-,+	DCAF5,EXD2	-59802,-21289
chr9:136214565-136214811	chr9	+	136214576	136214644	True	NM_133640,NM_000972,NM_181491,NR_000017,NR_002447,NM_003172,NM_017503,NR_002448,NR_000016	chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,+,-,+,+,-,+,+,+	MED22,RPL7A,MED22,SNORD36B,SNORD24,SURF1,SURF2,SNORD36A,SNORD36C	378,424,378,2304,1606,8767,8776,2666,3056
chr16:30210784-30211245	chr16	+	30211109	30211221	True	NM_177552,NR_037608,NR_037609,NM_001017390,NM_001014999,NR_002556,NM_001015000,NM_024044,NM_001031827,NM_001039182,NR_002557,NM_178044	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,-,+,+,-,-,-,+	SULT1A3,SLX1A-SULT1A3,SLX1B-SULT1A4,SULT1A4,SLX1A,LOC388242,SLX1A,SLX1B,BOLA2,BOLA2B,LOC613038,SLX1B	-611,-5406,-5406,-611,-5996,7077,-5996,-5996,-5482,-5482,7077,-5996
chr16:30210784-30211245	chr16	+	29471767	29471879	False	NM_177552,NR_037608,NR_037609,NM_001017390,NM_001014999,NR_002556,NM_001015000,NM_024044,NM_001031827,NM_001039182,NR_002557,NM_178044	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,-,+,+,-,-,-,+	SULT1A3,SLX1A-SULT1A3,SLX1B-SULT1A4,SULT1A4,SLX1A,LOC388242,SLX1A,SLX1B,BOLA2,BOLA2B,LOC613038,SLX1B	-611,-5406,-5406,-611,-5996,7070,-5996,-5996,-5482,-5482,7070,-5996
chr7:23723976-23724474	chr7	+	23724038	23724284	True	NM_199136,NR_002711,NM_001127364,NM_001127365	chr7,chr7,chr7,chr7	+,-,+,+	C7orf46,CLK2P,C7orf46,C7orf46	-4350,-97892,-4350,-4350
chr20:25042830-25043626	chr20	+	25042834	25043570	True	NM_003650,NM_032501	chr20,chr20	+,-	CST7,ACSS1	-113019,-3218
chr2:219283378-219284212	chr2	+	219283884	219284224	True	NM_007127,NM_022152	chr2,chr2	+,-	VIL1,TMBIM1	-97,-126604
chr21:17123084-17124625	chr21	+	17123366	17124150	True	NM_003489,NM_013396	chr21,chr21	-,+	NRIP1,USP25	-686240,-20924
chr6:71141066-71142868	chr6	+	71141173	71142780	True	NM_001851,NM_001162529	chr6,chr6	-,+	COL9A1,FAM135A	-128387,-5082
chr1:203446427-203448169	chr1	+	203446548	203448055	True	NM_002023,NM_201348,NM_002725	chr1,chr1,chr1	-,+,+	FMOD,PRELP,PRELP	-126259,-1716,-1716
chr15:20779891-20781766	chr15	+	20780022	20781531	True	NM_001145004,NR_027411	chr15,chr15	-,+	GOLGA6L6,GOLGA8C	-32908,-12399
chr15:20779891-20781766	chr15	+	23447420	23448929	False	NR_002824,NR_033350	chr15,chr15	-,+	HERC2P2,GOLGA8E	-69161,-12401
chr15:20779891-20781766	chr15	-	22701847	22703357	False	NR_027407,NM_001001413	chr15,chr15	-,+	GOLGA8DP,GOLGA6L1	12421,32888
chr4:147558102-147558315	chr4	+	147558102	147558328	True	NM_032128,NM_004575	chr4,chr4	-,+	SLC10A7,POU4F2	-114979,1716
chr6:83775897-83776298	chr6	+	83775903	83776342	True	NM_001199942,NM_015018,NM_198920	chr6,chr6,chr6	+,+,-	DOPEY1,DOPEY1,UBE2CBP	1042,1042,-358
chr10:81704987-81705989	chr10	+	81705203	81705993	True	NR_002724,NM_003019	chr10,chr10	+,-	MBL1P,SFTPD	-25320,2918
chr7:99214769-99215058	chr7	+	99214901	99215019	True	NM_145115,NM_000777	chr7,chr7	+,-	ZNF498,CYP3A5	-381,62664
chr21:45971079-45971519	chr21	+	45971276	45971534	True	NM_198696,NM_198687,NM_198693	chr21,chr21,chr21	-,+,-	KRTAP10-3,KRTAP10-4,KRTAP10-2	7159,22071,-76
chr21:45971079-45971519	chr21	-	46057349	46122175	False	NM_198698,NM_198699	chr21,chr21	-,+	KRTAP12-4,KRTAP10-12	17227,-5089
chr6:27706684-27707042	chr6	+	27706777	27707033	True	NM_003509,NM_003519	chr6,chr6	+,-	HIST1H2AI,HIST1H2BL	68943,68726
chr15:85363278-85363871	chr15	+	85363374	85363703	True	NM_014300,NM_020778	chr15,chr15	-,+	SEC11A,ALPK3	-103700,-3521
chrX:70433407-70433802	chrX	+	70433420	70433591	True	NM_000166,NM_001097642,NM_201599	chrX,chrX,chrX	+,+,-	GJB1,GJB1,ZMYM3	9464,1470,40504
chr11:126032753-126033293	chr11	+	126032842	126033314	True	NM_001144827,NM_024556	chr11,chr11	-,+	RPUSD4,FAM118B	48323,48304
chr11:34636702-34637889	chr11	+	34637077	34637923	True	NM_001422,NM_012153	chr11,chr11	-,+	ELF5,EHF	-101747,4664
chr1:28700230-28701781	chr1	+	28700415	28701458	True	NM_014280,NM_001048183	chr1,chr1	-,+	DNAJC8,PHACTR4	-140873,-4385
chr16:75497337-75497902	chr16	+	75497415	75497785	True	NM_145254,NM_007285	chr16,chr16	-,+	TMEM170A,GABARAPL2	849,102463
chr16:75497337-75497902	chr16	+	75550198	75550248	False	NM_024533,NM_007285	chr16,chr16	-,+	CHST5,GABARAPL2	18870,50000
chr6:32079730-32080400	chr6_mcf_hap5	+	3459563	3460159	False	NM_138717,NM_019105	chr6_mcf_hap5,chr6_mcf_hap5	+,-	PPT2,TNXB	40892,-2584
chr6:32079730-32080400	chr6_dbb_hap3	+	3358909	3359505	False	NM_138717,NM_019105	chr6_dbb_hap3,chr6_dbb_hap3	+,-	PPT2,TNXB	40896,-2584
chr6:32079730-32080400	chr6	+	32079735	32080331	True	NM_138717,NM_019105	chr6,chr6	+,-	PPT2,TNXB	40897,-2584
chr6:32079730-32080400	chr6_cox_hap2	+	3550397	3550993	False	NM_138717,NM_019105	chr6_cox_hap2,chr6_cox_hap2	+,-	PPT2,TNXB	40903,-2584
chr6:150465047-150465385	chr6	+	150465209	150465321	True	NM_030949,NM_024518	chr6,chr6	+,-	PPP1R14C,ULBP3	-1072,-75007
chr8:27336854-27337212	chr8	+	27336982	27337248	True	NM_001979,NM_000742	chr8,chr8	+,-	EPHX2,CHRNA2	11396,-169
chr16:56682197-56682426	chr16	+	56682212	56682406	True	NR_003658,NM_005949,NM_005947,NM_005946,NM_005950,NR_027781	chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,-,+	MT1DP,MT1F,MT1B,MT1A,MT1G,MT1DP	-4547,9448,3404,-9685,19621,-4664
chr11:67482177-67482461	chr11	+	67482197	67482507	True	NM_007103,NM_001031615	chr11,chr11	+,-	NDUFV1,ALDH3B2	-107925,-33512
chr4:5710830-5711981	chr4	+	5710908	5711954	True	NM_147127,NM_001166136,NM_153717	chr4,chr4,chr4	-,-,+	EVC2,EVC2,EVC	-614,-49,969
chr22:25436880-25437235	chr22	+	25436883	25437153	True	NM_001001663,NM_001145206	chr22,chr22	-,+	TMEM211,KIAA1671	-101569,-12993
chrM:5244-5743	chr1	+	566069	566262	False	NM_001005221,NR_015368	chr1,chr1	-,+	OR4F29,LOC643837	55825,196801
chr3:8542436-8543339	chr3	+	8542495	8543198	True	NM_014583,NR_033378	chr3,chr3	+,-	LMCD1,LOC100288428	312,196
chr7:120969925-120970288	chr7	+	120969929	120970286	True	NM_057168,NM_016087,NM_001040020	chr7,chr7,chr7	+,+,-	WNT16,WNT16,FAM3C	-897,-4566,66186
chr9:130663930-130665367	chr9	+	130664302	130664785	True	NM_001018078,NM_013443	chr9,chr9	+,-	FPGS,ST6GALNAC6	-98857,-2431
chr15:48009930-48010344	chr15	+	48010068	48010196	True	NM_016132,NM_024966,NM_153617,NM_153616,NM_153619,NM_153618,NM_020858	chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,+,+,+,+,+,+	MYEF2,SEMA6D,SEMA6D,SEMA6D,SEMA6D,SEMA6D,SEMA6D	460412,489,489,489,489,489,489
chr22:19457599-19458123	chr22	+	19457775	19457971	True	NM_005659,NM_001178010,NM_001178011,NM_001035247,NM_003504	chr22,chr22,chr22,chr22,chr22	-,+,+,-,+	UFD1L,CDC45,CDC45,UFD1L,CDC45	8827,9442,9442,8827,9444
chr2:11477225-11478761	chr2	+	11478087	11478759	True	NM_152391,NM_004850	chr2,chr2	+,-	PQLC3,ROCK2	-182605,6002
chr16:75655970-75656792	chr16	+	75656127	75656803	True	NR_036460,NM_012091,NM_018975	chr16,chr16,chr16	-,-,+	ADAT1,ADAT1,TERF2IP	468,468,24831
chr21:27942108-27942782	chr21	+	27942170	27942816	True	NM_002040,NM_052954	chr21,chr21	+,-	GABPA,CYYR1	-834892,2815
chr12:56660251-56660717	chr12	+	56660416	56660738	True	NM_173595,NM_144576,NM_001099337	chr12,chr12,chr12	-,+,+	ANKRD52,COQ10A,COQ10A	-8273,-97,328
chr4:49619215-49620240	chr4	+	49619971	49620045	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-631757,-711156
chr22:42829549-42830132	chr22	+	42829614	42829978	True	NR_027786,NM_145912	chr22,chr22	+,-	SERHL,NFAM1	66606,-1213
chrX:154610860-154611101	chrX	+	154610895	154610975	True	NR_036049,NM_001007524,NM_001007523,NM_012151,NM_080720,NR_036260,NR_036259,NM_001017991,NM_001017990	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,-,-,+,+	MIR1184-1,F8A3,F8A2,F8A1,H2AFB3,MIR1184-3,MIR1184-2,H2AFB2,H2AFB1	1922,788,788,773,-526,1922,1922,-518,-526
chrX:154610860-154611101	chrX	+	154113784	154113864	False	NR_036049,NM_001007524,NM_001007523,NM_012151,NM_080720,NR_036260,NM_019863,NR_036259,NM_001017990	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,-,-,-,+	MIR1184-1,F8A3,F8A2,F8A1,H2AFB3,MIR1184-3,F8,MIR1184-2,H2AFB1	1919,785,785,770,-526,1919,763,1919,-526
chrX:154610860-154611101	chrX	-	154689048	154689128	False	NR_036049,NM_001007524,NM_001007523,NM_012151,NM_080720,NR_036260,NR_036259,NM_001017991,NM_001017990	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,-,-,-,-,+,+,-,-	MIR1184-1,F8A3,F8A2,F8A1,H2AFB3,MIR1184-3,MIR1184-2,H2AFB2,H2AFB1	-1921,-787,-787,-772,526,-1921,-1921,518,526
chr20:55963453-55963987	chr20	+	55963709	55963793	True	NM_183425,NM_001190472,NM_017495	chr20,chr20,chr20	+,-,+	RBM38,MTRNR2L3,RBM38	2669,-28831,2669
chr6:71122746-71123117	chr6	+	71122789	71122967	True	NM_020819,NM_001851,NM_001105531	chr6,chr6,chr6	+,-,+	FAM135A,COL9A1,FAM135A	139,-110003,139
chr8:41367115-41368750	chr8	+	41367395	41368619	True	NM_152568,NM_032336,NM_001002296	chr8,chr8,chr8	-,+,+	NKX6-3,GINS4,GOLGA7	136317,18105,-19273
chr20:34254858-34255220	chr20	+	34254975	34255039	True	NM_080748,NM_152838,NM_001198863,NM_006047,NM_001198838,NR_037188,NM_152928,NM_152925,NM_152926,NM_152927,NM_001198840	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,-,-,-,-,-,-,-,-,-,-	ROMO1,RBM12,CPNE1,RBM12,RBM12,CPNE1,CPNE1,CPNE1,CPNE1,CPNE1,RBM12	32192,-2097,-2097,-2097,-2097,-2116,-2097,-2097,-2097,-2097,-2097
chr20:47445115-47445519	chr20	+	47445142	47445454	True	NM_006420,NM_020820	chr20,chr20	+,-	ARFGEF2,PREX1	92820,-722
chr22:36554721-36556428	chr22	+	36554917	36556415	True	NM_145641,NM_145640,NM_145642,NM_001136540,NR_027833,NR_027834,NR_027835	chr22,chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,+,-,-,-	APOL3,APOL3,APOL3,APOL1,APOL3,APOL3,APOL3	5860,612,5860,92701,612,612,612
chr15:25439159-25439576	chr15	+	25439233	25439511	True	NR_003308,NR_003358,NR_003311,NR_003310,NM_130838,NR_003297,NR_003344,NR_003309,NR_003351,NR_003300,NR_003301,NR_003302,NR_003303,NR_003304,NR_003305,NR_003306	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,-,+,+,+,+,+,+,+,+,+,+,+	SNORD115-16,SNORD115-43,SNORD115-19,SNORD115-18,UBE3A,SNORD115-5,SNORD115-29,SNORD115-17,SNORD115-36,SNORD115-8,SNORD115-9,SNORD115-10,SNORD115-11,SNORD115-12,SNORD115-13,SNORD115-14	5083,-4723,6958,6958,211192,-2718,-4723,6958,-4723,-9831,-2721,-2721,-4723,-2721,-816,556
chr12:52212758-52213946	chr12	+	52212862	52213928	True	NM_001130015,NM_001013690	chr12,chr12	+,-	ANKRD33,FIGNL2	67864,11823
chr12:121417304-121417984	chr12	+	121417368	121417910	True	NR_024345,NM_000545	chr12,chr12	-,+	NCRNA00262,HNF1A	-7273,-870
chr9:95737157-95737449	chr9	+	95737157	95737433	True	NM_031486,NM_033086	chr9,chr9	-,+	ZNF484,FGD3	-96867,-490
chr20:34896408-34896636	chr20	+	34896437	34896665	True	NR_027451,NM_015511	chr20,chr20	-,+	LOC647979,C20orf4	-257555,-72041
chr19:55420148-55420451	chr19	+	55420208	55420357	True	NM_004829,NR_027041,NR_027043,NM_001127255,NM_001145457,NM_001145458	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,-,+,+	NCR1,NCR1,NCR1,NLRP7,NCR1,NCR1	-2751,-2751,-2751,38569,-2751,-2751
chr22:24891849-24892064	chr22	+	24891856	24892050	True	NR_028483,NR_028484,NM_016327	chr22,chr22,chr22	-,-,+	C22orf45,C22orf45,UPB1	-1073,-1073,-656
chr10:47080593-47080837	chr10	+	47080598	47080866	True	NR_003277,NM_005972	chr10,chr10	-,+	LOC728643,PPYR1	53020,2667
chr3:123597197-123598240	chr3	+	123597355	123598185	True	NM_053025,NM_053027,NM_053026,NR_028136,NM_053028	chr3,chr3,chr3,chr3,chr3	-,-,-,+,-	MYLK,MYLK,MYLK,KALRN,MYLK	5014,5014,5014,215372,5014
chr2:106811156-106811736	chr2	+	106811164	106811773	True	NM_025076,NM_032411	chr2,chr2	-,+	UXS1,C2orf40	-369,-129105
chr1:15737125-15737575	chr1	+	15737285	15737503	True	NM_024329,NM_001229	chr1,chr1	+,-	EFHD2,CASP9	-945,113487
chr19:51073142-51073752	chr19	+	51073264	51073676	True	NR_004384,NM_001080457	chr19,chr19	+,-	SNAR-F,LRRC4B	34543,-1962
chr20:813504-813768	chr20	+	813714	813805	True	NM_033409,NM_207121,NM_001042353	chr20,chr20,chr20	-,+,+	C20orf54,FAM110A,FAM110A	-64486,2905,550
chr19:42362782-42363747	chr19	+	42362910	42363710	True	NM_001022,NM_173506	chr19,chr19	+,-	RPS19,LYPD4	277,-14402
chr16:4607129-4608047	chr16	+	4607279	4608035	True	NM_001145011,NM_013399	chr16,chr16	+,-	LOC342346,C16orf5	-839,-18463
chr19:4341988-4342304	chr19	+	4342073	4342339	True	NM_001159846,NM_001013841,NM_032868,NM_017720	chr19,chr19,chr19,chr19	+,-,+,-	MPND,STAP2,MPND,STAP2	1184,-3226,1184,-3226
chr1:221053846-221054553	chr1	+	221053860	221054522	True	NM_021958,NR_024236	chr1,chr1	+,-	HLX,LOC400804	-1170,455166
chr18:32642164-32643113	chr18	+	32642216	32643063	True	NM_001112734,NR_026570	chr18,chr18	-,+	ZSCAN30,MAPRE2	227183,-20951
chr19:48774567-48774775	chr19	+	48774569	48774669	True	NM_001184904,NM_153608	chr19,chr19	-,+	CARD8,ZNF114	-15366,14
chr3:44391200-44393077	chr3	+	44391997	44392911	True	NM_173826,NM_181489	chr3,chr3	+,-	C3orf23,ZNF445	-12104,126313
chr17:56831693-56832079	chr17	+	56831916	56832024	True	NM_014906,NM_198393	chr17,chr17	+,-	PPM1E,TEX14	1207,-62500
chr19:59055810-59056110	chr19	+	59055815	59056159	True	NM_198426,NM_005762	chr19,chr19	-,+	CHMP2A,TRIM28	10246,-30
chr3:33484039-33484354	chr3	+	33484107	33484168	True	NM_001171713,NM_014517,NM_001128161,NM_001128160	chr3,chr3,chr3,chr3	+,-,-,-	FBXL2,UBP1,UBP1,UBP1	-165229,-2237,-2210,-2237
chr21:47648859-47649147	chr21	+	47649115	47649195	True	NM_001145436,NM_002340,NR_002776,NM_001001438,NM_001145437	chr21,chr21,chr21,chr21,chr21	-,-,+,-,-	LSS,LSS,MCM3AP-AS1,LSS,LSS	-377,-377,-8,-377,-377
chr9:112258644-112259576	chr9	+	112258649	112259569	True	NM_001145368,NM_002829,NM_001037293	chr9,chr9,chr9	-,-,+	PTPN3,PTPN3,PALM2	1074,1074,143498
chrX:108974138-108976023	chrX	+	108974642	108975896	True	NM_004458,NM_022977,NM_018698	chrX,chrX,chrX	-,-,+	ACSL4,ACSL4,NXT2	775,775,-195683
chr1:16011708-16012514	chr1	+	16011806	16012529	True	NM_024758,NM_015164	chr1,chr1	-,+	AGMAT,PLEKHM2	-100201,-1030
chr8:141466365-141466644	chr8	+	141466542	141466693	True	NM_001160372,NM_017444,NM_031466	chr8,chr8,chr8	-,+,-	TRAPPC9,CHRAC1,TRAPPC9	1221,54707,2038
chr1:67329232-67330415	chr1	+	67329490	67330217	True	NM_001077700,NM_024763	chr1,chr1	+,-	MIER1,WDR78	60360,60403
chr1:52616369-52617278	chr1	+	52616592	52617135	True	NM_015913,NM_007324,NM_007323,NM_004799	chr1,chr1,chr1,chr1	-,+,+,+	TXNDC12,ZFYVE9,ZFYVE9,ZFYVE9	-95545,-8604,-8604,-8604
chr22:44965939-44966585	chr22	+	44965948	44966621	True	NR_028409,NM_032287,NR_028411,NR_028410	chr22,chr22,chr22,chr22	+,-,+,+	NCRNA00207,LDOC1L,NCRNA00207,NCRNA00207	-779,-71943,-779,-779
chr3:120072927-120073150	chr3	+	120072926	120073185	True	NM_001099678,NM_001168331	chr3,chr3	-,+	LRRC58,NDUFB4	-4740,241942
chr14:20898298-20898733	chr14	+	20898312	20898768	True	NM_001109997,NM_001641	chr14,chr14	-,+	KLHL33,APEX1	5083,24521
chr17:41131353-41131667	chr17	+	41131359	41131639	True	NM_001142653,NM_001136042,NM_025267,NM_173079,NM_001142654	chr17,chr17,chr17,chr17,chr17	-,-,-,+,-	AARSD1,AARSD1,AARSD1,RUNDC1,AARSD1	956,956,431,942,956
chr22:43548215-43548527	chr22	+	43548334	43548552	True	NM_007311,NM_014507,NM_173467,NM_000714	chr22,chr22,chr22,chr22	+,-,-,+	TSPO,MCAT,MCAT,TSPO	-850,-8931,-8931,-850
chr6:139140878-139141162	chr6	+	139141136	139141210	True	NM_001195037,NM_001128617	chr6,chr6	+,-	ECT2L,REPS1	-23940,168238
chr6:5242598-5243045	chr6	+	5242597	5242675	True	NM_006567,NM_001164841	chr6,chr6	+,-	FARS2,LYRM4	18908,18547
chr5:153416471-153418040	chr5	+	153416483	153418024	True	NM_005927,NM_001135037,NR_024152,NM_018691	chr5,chr5,chr5,chr5	+,+,+,-	MFAP3,MFAP3,MFAP3,FAM114A2	494,494,494,523
chr14:94463150-94463366	chr14	+	94463155	94463415	True	NR_024183,NR_024182,NM_001202429,NR_024184	chr14,chr14,chr14,chr14	+,+,-,+	C14orf48,C14orf48,ASB2,C14orf48	226,200,-20079,226
chr7:24323394-24324027	chr7	+	24323408	24323920	True	NM_001127453,NM_000905	chr7,chr7	-,+	DFNA5,NPY	473213,-114
chr6:30862395-30863245	chr6_qbl_hap6	+	2155568	2156100	False	NM_001202521,NM_001202522,NM_001202523,NM_205854,NM_013994	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	+,+,+,-,+	DDR1,DDR1,DDR1,SFTA2,DDR1	-6167,-6167,-9875,36873,-6167
chr6:30862395-30863245	chr6_dbb_hap3	+	2156697	2157229	False	NM_001202521,NM_001202522,NM_001202523,NM_205854,NM_013994	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	+,+,+,-,+	DDR1,DDR1,DDR1,SFTA2,DDR1	-6181,-6181,-9889,36883,-6181
chr6:30862395-30863245	chr6_mann_hap4	+	2210660	2211192	False	NM_001202521,NM_001202522,NM_001202523,NM_205854,NM_013994	chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4	+,+,+,-,+	DDR1,DDR1,DDR1,SFTA2,DDR1	-6161,-6161,-9869,36891,-6161
chr6:30862395-30863245	chr6	+	30862579	30863111	True	NM_001202521,NM_001202522,NM_001202523,NM_205854,NM_013994	chr6,chr6,chr6,chr6,chr6	+,+,+,-,+	DDR1,DDR1,DDR1,SFTA2,DDR1	-6165,-6165,-9873,36891,-6165
chr6:30862395-30863245	chr6_cox_hap2	+	2374679	2375211	False	NM_001202521,NM_001202522,NM_001202523,NM_205854,NM_013994	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,+,+,-,+	DDR1,DDR1,DDR1,SFTA2,DDR1	-6167,-6167,-9875,36714,-6167
chr1:151580722-151581560	chr1	+	151580724	151581088	True	NM_030918,NM_001172648	chr1,chr1	+,-	SNX27,CELF3	3573,107754
chr11:68782228-68782721	chr11	+	68782415	68782749	True	NM_139075,NM_001098515,NM_145015	chr11,chr11,chr11	+,-,-	TPCN2,MRGPRF,MRGPRF	33600,-1565,-1565
chr20:34559156-34560627	chr20	+	34559649	34560675	True	NM_080834,NM_016558	chr20,chr20	+,-	C20orf152,SCAND1	-3186,-16368
chr15:64994022-64994891	chr15	+	64994083	64994841	True	NM_001195059,NM_002537	chr15,chr15	+,-	PLEKHO2,OAZ2	139240,671
chr4:6200350-6200966	chr4	+	6200369	6200965	True	NM_001099433,NM_144720,NR_037863	chr4,chr4,chr4	-,-,+	JAKMIP1,JAKMIP1,LOC285484	1403,1403,1494
chr13:46758486-46758738	chr13	+	46758513	46758723	True	NM_002298,NM_001164211	chr13,chr13	-,+	LCP1,LRCH1	-2054,368572
chr17:43919493-43920911	chr17_ctg5_hap1	-	946836	948037	False	NM_175882,NR_024559	chr17_ctg5_hap1,chr17_ctg5_hap1	-,+	IMP5,LOC100128977	-1552,-52196
chr17:43919493-43920911	chr17	+	43919501	43920703	True	NM_175882,NR_024559	chr17,chr17	+,-	IMP5,LOC100128977	1552,52229
chrX:77044566-77045126	chrX	+	77044628	77044846	True	NM_138270,NM_001866,NM_000489	chrX,chrX,chrX	-,+,-	ATRX,COX7B,ATRX	-2909,110114,-2909
chr13:24139552-24140820	chr13	+	24140132	24140680	True	NM_148957,NM_001204459,NM_014363	chr13,chr13,chr13	+,+,-	TNFRSF19,TNFRSF19,SACS	3828,3828,-132291
chr2:136495298-136495686	chr2	+	136495446	136495516	True	NM_002299,NM_014607	chr2,chr2	-,+	LCT,UBXN4	99290,3672
chr16:70333130-70333672	chr16	+	70333230	70333532	True	NM_001014451,NM_001605,NM_007242,NM_001014449	chr16,chr16,chr16,chr16	+,-,+,+	DDX19B,AARS,DDX19B,DDX19B	-209,-9818,-209,-209
chr4:1686422-1686658	chr4	+	1686473	1686593	True	NM_001013622,NM_001174070,NM_006342	chr4,chr4,chr4	-,-,+	FAM53A,FAM53A,TACC3	-755,-485,36672
chr6:110733303-110733691	chr6	+	110733589	110733715	True	NM_004032,NM_003649,NM_015891	chr6,chr6,chr6	-,-,+	DDO,DDO,CDC40	3088,3088,-232029
chr16:85061977-85063636	chr16	+	85062130	85063615	True	NM_017740,NM_014732	chr16,chr16	-,+	ZDHHC7,KIAA0513	-16989,-772
chr6:160182622-160182854	chr6	+	160182632	160182847	True	NR_037166,NM_005891	chr6,chr6	-,+	LOC100129518,ACAT2	567,141
chr7:33164361-33165556	chr7	+	33164392	33165197	True	NM_001033605,NM_001033604,NM_014451,NM_203288,NM_198428	chr7,chr7,chr7,chr7,chr7	+,+,+,-,+	BBS9,BBS9,BBS9,RP9,BBS9	3954,3954,3954,-15390,3954
chr22:21400638-21400962	chr22	+	21400646	21400907	True	NR_002829,NR_027006	chr22,chr22	-,+	P2RX6P,LOC400891	-2108,-455
chr20:32698299-32699277	chr20	+	32698321	32699295	True	NM_016732,NM_003908	chr20,chr20	+,-	RALY,EIF2S2	-116642,840
chr3:98452524-98452977	chr3	+	98452738	98452994	True	NM_006100,NM_000097	chr3,chr3	+,-	ST3GAL6,CPOX	-1225,-140283
chr1:229479687-229480976	chr1	+	229479989	229480621	True	NM_145257,NM_006542	chr1,chr1	-,+	C1orf96,SPHAR	-1301,-39911
chr2:175110950-175111803	chr2	+	175111110	175111786	True	NM_013341,NM_001011708,NM_001145250	chr2,chr2,chr2	-,-,+	OLA1,OLA1,SP9	1641,1641,88034
chr3:123635898-123636264	chr3	+	123635978	123636069	True	NM_053025,NR_028136	chr3,chr3	-,+	MYLK,KALRN	-32829,177488
chr8:23563284-23563996	chr8	+	23563391	23564033	True	NM_016612,NM_001136271	chr8,chr8	+,-	SLC25A37,NKX2-6	-177079,-15
chr9:45356450-45356811	chr9	+	45356506	45356850	True	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-366321,-1725776
chr9:45356450-45356811	chr9	-	68377911	68377961	False	NR_033907,NR_034006	chr9,chr9	-,+	LOC642236,LOC100132352	76464,348579
chr9:45356450-45356811	chr9	+	66493667	66493735	False	NR_024443,NR_024496	chr9,chr9	-,+	LOC100133920,LOC442421	537297,533
chr7:98739730-98740952	chr7	+	98739738	98740665	True	NM_020429,NM_001199847,NR_002147,NM_181349	chr7,chr7,chr7,chr7	-,-,+,-	SMURF1,SMURF1,MYH16,SMURF1	1128,1128,130258,1128
chr3:23858052-23858767	chr3	+	23858276	23858662	True	NM_001202476,NM_020345	chr3,chr3	+,-	UBE2E1,NKIRAS1	-6398,99925
chr19:57875365-57875830	chr19	+	57875505	57875831	True	NM_173631,NR_002166,NM_020633	chr19,chr19,chr19	+,+,-	ZNF547,TRAPPC2P1,VN1R1	-666,-678,92326
chr1:26195540-26195917	chr1	+	26195655	26195762	True	NM_178422,NM_024037,NM_001099626	chr1,chr1,chr1	-,-,+	PAQR7,C1orf135,FAM54B	2039,-9807,-48394
chr22:39635882-39637122	chr22	+	39635987	39637161	True	NM_145731,NM_002608,NM_033016	chr22,chr22,chr22	+,-,-	SYNGR1,PDGFB,PDGFB	108792,3846,83
chr4:62418684-62419705	chr4	+	62418764	62419720	True	NM_015236,NM_001010874	chr4,chr4	+,-	LPHN3,TECRL	-55976,2855508
chr1:54352205-54353821	chr1	+	54352268	54353426	True	NM_018982,NM_213593,NR_036640,NM_000792,NR_036639,NM_001039716,NM_001039715	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,+,-,+,-,+,+	YIPF1,DIO1,YIPF1,DIO1,YIPF1,DIO1,DIO1	2111,6434,2111,6434,2111,6434,6434
chr3:182968498-182968901	chr3	+	182968527	182968941	True	NM_032047,NM_014398	chr3,chr3	+,-	B3GNT5,LAMP3	2090,-87860
chr8:124434087-124435700	chr8	+	124434632	124435450	True	NM_018024,NM_014109	chr8,chr8	+,-	WDYHV1,ATAD2	-5718,-25927
chr6:90348712-90349076	chr6	+	90349033	90349117	True	NM_020466,NR_028495,NR_028494,NR_028493,NM_001137667	chr6,chr6,chr6,chr6,chr6	-,-,-,-,+	LYRM2,LYRM2,LYRM2,LYRM2,CASP8AP2	-559,-817,-817,-817,190501
chr6:110735268-110735506	chr6	+	110735285	110735491	True	NM_004032,NM_003649,NM_015891	chr6,chr6,chr6	-,-,+	DDO,DDO,CDC40	1320,1320,-233712
chr21:46010959-46011247	chr21	+	46010965	46011285	True	NM_198689,NM_198688	chr21,chr21	+,-	KRTAP10-7,KRTAP10-6	9211,1151
chr21:46010959-46011247	chr21	-	46058072	46058122	False	NM_198698,NM_181688,NM_198692	chr21,chr21,chr21	-,+,+	KRTAP12-4,KRTAP10-10,KRTAP10-11	16504,-850,8208
chr3:16309009-16309635	chr3	+	16309016	16309651	True	NM_206831,NM_001047434,NM_138381	chr3,chr3,chr3	-,-,+	DPH3,DPH3,OXNAD1	-2520,-2520,-2400
chr17:25668530-25668918	chr17	+	25668529	25668968	True	NM_000625,NM_134265	chr17,chr17	-,+	NOS2,WSB1	458638,-47474
chr7:75931257-75931737	chr7	+	75931566	75931786	True	NM_012479,NM_001540	chr7,chr7	-,+	YWHAG,HSPB1	56606,88
chr2:207018217-207019438	chr2	+	207018329	207019259	True	NM_001959,NM_005006,NM_001037663,NM_021121,NR_002589,NR_002590,NM_001199984,NM_001199983,NM_001199982,NM_001199981	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,-,+,+,+,+,-,-,-,-	EEF1B2,NDUFS1,EEF1B2,EEF1B2,SNORD51,SNORA41,NDUFS1,NDUFS1,NDUFS1,NDUFS1	5058,5046,5058,5058,7345,7692,4721,5046,5046,5046
chr5:177615762-177616378	chr5	+	177615853	177616285	True	NR_003281,NM_004499	chr5,chr5	-,+	GMCL1L,HNRNPAB	-1420,15222
chr19:35819592-35820254	chr19	+	35819712	35820210	True	NM_152481,NM_001771,NM_001185099,NM_001185100,NM_001185101	chr19,chr19,chr19,chr19,chr19	-,+,+,+,+	FAM187B,CD22,CD22,CD22,CD22	-100084,-22,-22,-22,-22
chr8:121815029-121816608	chr8	+	121815172	121816633	True	NM_021021,NM_022045	chr8,chr8	-,+	SNTB1,MTBP	7729,-357557
chrX:33194907-33196497	chrX	+	33195129	33196469	True	NM_004006,NM_152631	chrX,chrX	-,+	DMD,FAM47B	33254,1764443
chr20:62889229-62890832	chr20	+	62889387	62890368	True	NM_001104925,NM_005286	chr20,chr20	+,-	PCMTD2,NPBWR2	-2399,-151203
chr22:41600643-41600966	chr22	+	41600877	41601003	True	NM_138481,NM_031488	chr22,chr22	-,+	CHADL,L3MBTL2	35982,309
chr5:157001806-157002387	chr5	+	157001865	157002417	True	NM_001145132,NM_033274	chr5,chr5	+,-	C5orf52,ADAM19	96143,416
chr5:69345645-69346404	chr5	+	69345680	69346138	True	NM_022876,NM_022877,NM_022874,NM_022875,NM_000344,NM_017411,NR_024054	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,-	SMN2,SMN2,SMN1,SMN2,SMN1,SMN2,LOC100170939	-381,-381,-381,-381,-381,-381,175534
chr5:69345645-69346404	chr5	+	70221098	70221556	False	NM_022876,NM_022877,NM_022874,NM_022875,NM_000344,NM_017411,NM_004536	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,-	SMN2,SMN2,SMN1,SMN2,SMN1,SMN2,NAIP	-381,-381,-381,-381,-381,-381,99435
chr3:149799672-149800037	chr3	+	149799766	149799955	True	NM_053024,NR_036538	chr3,chr3	-,+	PFN2,LOC646903	-111025,-110751
chr19:51305191-51305760	chr19	+	51305356	51305754	True	NR_003067,NR_003069,NR_003068,NM_033068,NM_199249,NM_199250	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,+,-,-	SNORD88A,SNORD88C,SNORD88B,ACPT,C19orf48,C19orf48	-2564,-26,-2974,-11742,2270,2268
chr2:91933947-91934676	chr2	+	91934040	91934632	True	NR_003503,NR_027238	chr2,chr2	+,-	GGT8P,LOC654342	28735,-86065
chr11:2481473-2481963	chr11	+	2481519	2482011	True	NM_181798,NM_014555	chr11,chr11	+,-	KCNQ1,TRPM5	672,-37244
chr3:15467538-15468691	chr3	+	15467760	15468572	True	NM_033083,NM_152396	chr3,chr3	+,-	EAF1,METTL6	491,520
chr9:69380465-69380921	chr2	-	95524375	95524425	True	NR_003366,NM_144705	chr2,chr2	-,+	ANKRD20A8P,TEKT4	-1555,12806
chr9:69380465-69380921	chr9	+	69380495	69380951	False	NM_001085457,NM_001098805	chr9,chr9	-,+	CBWD6,ANKRD20A4	-117902,1029
chr9:69380465-69380921	chr9	+	67925681	67925731	False	NR_027422,NM_001012419,NM_032250	chr9,chr9,chr9	-,+,+	FAM27B,ANKRD20A3,ANKRD20A1	-131492,1029,1029
chr9:69380465-69380921	chr9	+	42367279	42367329	False	NR_003670,NM_001012419,NM_001012421	chr9,chr9,chr9	-,+,+	KGFLP2,ANKRD20A3,ANKRD20A2	-347695,973,973
chr1:204486854-204487230	chr1	+	204486867	204486942	True	NM_001204171,NM_002646,NM_001204172,NR_024171,NM_002393	chr1,chr1,chr1,chr1,chr1	+,-,+,+,+	MDM4,PIK3C2B,MDM4,MDM4,MDM4	-1411,-27393,-1411,-1411,-1411
chr12:10020959-10021396	chr12	+	10020958	10021430	True	NM_005127,NM_001190765	chr12,chr12	-,+	CLEC2B,KLRF2	1082,12657
chr19:47216434-47217021	chr19	+	47216686	47216834	True	NM_001079882,NM_001039885,NM_001079880,NM_001079881,NM_016457,NR_036157	chr19,chr19,chr19,chr19,chr19,chr19	-,+,-,-,-,-	PRKD2,FKRP,PRKD2,PRKD2,PRKD2,MIR320E	793,32468,3600,3600,3600,-4084
chr7:63502739-63504548	chr7	+	63502977	63504500	True	NM_178558,NM_001159522	chr7,chr7	-,+	ZNF680,ZNF727	519055,1320
chr12:7025235-7025587	chr12	+	7025241	7025587	True	NM_032641,NM_001007026,NM_001975	chr12,chr12,chr12	-,+,+	SPSB2,ATN1,ENO2	-42720,8038,-1678
chr13:97645768-97646476	chr13	+	97645807	97646333	True	NM_144778,NM_080818	chr13,chr13	+,-	MBNL2,OXGR1	228240,321
chr19:33686933-33687650	chr19	+	33687477	33687699	True	NM_002333,NM_019849	chr19,chr19	+,-	LRP3,SLC7A10	-1929,29107
chr7:131451069-131451540	chr7	+	131451155	131451475	True	NM_005397,NM_013255	chr7,chr7	-,+	PODXL,MKLN1	-209779,-438619
chr4:55977420-55978990	chr4	+	55977470	55978237	True	NM_024592,NM_002253	chr4,chr4	+,-	SRD5A3,KDR	234150,13582
chr20:9107882-9108490	chr20	+	9107929	9108256	True	NM_001172646,NM_020341	chr20,chr20	+,-	PLCB4,PAK7	-58279,711481
chr7:128169785-128170324	chr7	+	128169939	128170291	True	NM_183243,NM_018396	chr7,chr7	-,+	IMPDH1,METTL2B	-119903,-53207
chr7:128169785-128170324	chr17	+	60554714	60554978	False	NR_027486,NM_001112707,NM_006852	chr17,chr17,chr17	-,+,+	TBC1D3P2,TLK2,TLK2	-201698,1407,1407
chrX:48373539-48374452	chrX	+	48373768	48374330	True	NM_033518,NM_203475,NM_203474,NM_022825,NM_203473,NM_006579	chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,+	SLC38A5,PORCN,PORCN,PORCN,PORCN,EBP	-45124,-5647,-5647,-6448,-6448,5833
chr9:127960166-127960631	chr9	+	127960201	127960585	True	NM_005833,NM_001123355,NM_002721,NM_001123369,NM_001174153,NM_001174152	chr9,chr9,chr9,chr9,chr9,chr9	+,-,-,-,+,+	RABEPK,PPP6C,PPP6C,PPP6C,RABEPK,RABEPK	2276,-7983,-7983,-7983,2235,2235
chr7:6315424-6316252	chr7	+	6315739	6315826	True	NM_006908,NM_004227	chr7,chr7	+,-	RAC1,CYTH3	98299,-3497
chr6:37466789-37467119	chr6	+	37466822	37467137	True	NM_015050,NM_138493	chr6,chr6	+,-	FTSJD2,C6orf129	-65966,614
chr19:45450452-45451180	chr19	+	45450471	45450677	True	NM_001646,NM_001294,NR_037932,NM_000483,NM_001199468,NM_145288	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,-	APOC4,CLPTM1,APOC4-APOC2,APOC2,CLPTM1,ZNF296	-5027,7921,-5027,-1283,7921,129061
chr9:5820019-5821588	chr9	+	5820497	5821603	True	NM_024896,NM_005511	chr9,chr9	-,+	ERMP1,MLANA	11528,69305
chrX:48936035-48936479	chrX	+	48936195	48936511	True	NM_007213,NM_001163323,NM_001029896	chrX,chrX,chrX	-,+,-	PRAF2,CCDC120,WDR45	-4533,-19723,1103
chr8:103427337-103428029	chr8	+	103427488	103427986	True	NM_024410,NM_015902	chr8,chr8	+,-	ODF1,UBR5	135861,-2571
chr11:118780220-118781129	chr11	+	118780325	118781011	True	NM_032966,NM_182557	chr11,chr11	+,-	CXCR5,BCL9L	-16275,652
chr9:35752050-35752265	chr9	+	35752055	35752281	True	NM_020944,NM_001080496,NM_001044264	chr9,chr9,chr9	-,+,-	GBA2,RGP1,MSMP	-2830,-2829,2043
chr10:81371678-81373472	chr10	+	81371929	81373262	True	NM_005411,NM_001093770,NM_001098668,NM_001164644,NM_001164645,NM_001164646,NM_001164647	chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,-,+,+,+,+	SFTPA1,SFTPA1,SFTPA2,SFTPA1,SFTPA1,SFTPA1,SFTPA1	-1285,-1285,-51766,-1285,-1285,-1285,-1285
chr17:46804202-46804574	chr17	+	46804246	46804554	True	NR_036150,NR_024103,NM_032391,NM_006361	chr17,chr17,chr17,chr17	-,+,-,-	MIR3185,NCRNA00253,PRAC,HOXB13	-2409,-3755,-4364,1607
chr14:69264104-69264331	chr14	+	69264108	69264328	True	NM_207442,NM_004926,NM_001193360	chr14,chr14,chr14	-,-,+	C14orf181,ZFP36L1,EXD2	-918,-4323,393865
chr8:144767098-144767548	chr8	+	144767224	144767423	True	NM_001162914,NM_001100598,NM_001100599,NM_173831	chr8,chr8,chr8,chr8	-,+,+,+	LOC100130274,ZNF707,ZNF707,ZNF707	22919,-653,-653,-653
chr8:128428507-128428947	chr6	-	31132617	31133382	False	NM_001105563,NM_007109,NM_001173531,NM_001105564,NM_001077511,NM_002701,NM_019052,NM_203289	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,+,-,-,+,-,-,-	CCHCR1,TCF19,POU5F1,CCHCR1,TCF19,POU5F1,CCHCR1,POU5F1	-7051,-6625,1570,-7051,-6625,5406,-6602,1570
chr8:128428507-128428947	chr1	+	155403764	155403814	False	NR_034180,NR_030282	chr1,chr1	+,-	POU5F1P4,MIR555	-844,-87528
chr8:128428507-128428947	chr12	-	8286774	8286827	False	NM_194450,NR_036440	chr12,chr12	+,-	CLEC4A,POU5F1P3	-10600,674
chr8:128428507-128428947	chr6_mann_hap4	-	2480961	2481728	False	NM_001105563,NM_007109,NM_001173531,NM_001105564,NM_001077511,NM_002701,NM_019052,NM_203289	chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4	-,+,-,-,+,-,-,-	CCHCR1,TCF19,POU5F1,CCHCR1,TCF19,POU5F1,CCHCR1,POU5F1	-7017,-6593,1580,-7017,-6593,5423,-6568,1580
chr8:128428507-128428947	chr6_dbb_hap3	-	2429741	2430508	False	NM_001105563,NM_007109,NM_001173531,NM_001105564,NM_001077511,NM_002701,NM_019052,NM_203289	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	-,+,-,-,+,-,-,-	CCHCR1,TCF19,POU5F1,CCHCR1,TCF19,POU5F1,CCHCR1,POU5F1	-7047,-6623,1580,-7047,-6623,5422,-6598,1580
chr8:128428507-128428947	chr6_mcf_hap5	-	2514540	2515307	True	NM_001105563,NM_007109,NM_001173531,NM_001105564,NM_001077511,NM_002701,NM_019052,NM_203289	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	-,+,-,-,+,-,-,-	CCHCR1,TCF19,POU5F1,CCHCR1,TCF19,POU5F1,CCHCR1,POU5F1	-7017,-6593,1580,-7017,-6593,5423,-6568,1580
chr8:128428507-128428947	chr6_ssto_hap7	-	2467984	2468321	False	NM_007109,NM_001173531,NM_001077511,NM_002701,NM_203289	chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7	+,-,+,-,-	TCF19,POU5F1,TCF19,POU5F1,POU5F1	-7083,1580,-7083,5420,1580
chr20:32159763-32161579	chr20	+	32160028	32161175	True	NM_005093,NM_001039709,NM_031231	chr20,chr20,chr20	+,+,-	CBFA2T2,CBFA2T2,NECAB3	-9916,-9916,101139
chrX:77528880-77529426	chrX	+	77528918	77529456	True	NM_006639,NM_000291	chrX,chrX	-,+	CYSLTR1,PGK1	53681,-169303
chr9:118278098-118279403	chr9	+	118278098	118279247	True	NM_017418,NM_002160	chr9,chr9	+,-	DEC1,TNC	-374052,-397612
chr1:14023497-14024459	chr1	+	14023526	14024390	True	NM_015866,NM_001135610,NM_012231,NM_001010847	chr1,chr1,chr1,chr1	+,+,+,-	PRDM2,PRDM2,PRDM2,LRRC38	6959,2344,6959,-183284
chr5:137801604-137801852	chr5	+	137801706	137801878	True	NM_004730,NM_001964	chr5,chr5	-,+	ETF1,EGR1	77104,-576
chr2:242673458-242673699	chr2	+	242673457	242673591	True	NM_152783,NR_033255	chr2,chr2	+,-	D2HGDH,DTYMK	438,-47074
chr14:75567945-75569190	chr14	+	75568005	75568884	True	NM_033116,NM_024643	chr14,chr14	-,+	NEK9,FAM164C	24945,-31765
chr19:59028234-59028543	chr19	+	59028361	59028543	True	NM_012254,NM_032792,NM_005762	chr19,chr19,chr19	-,-,+	SLC27A5,ZBTB45,TRIM28	-4929,2428,27292
chr13:47128879-47130086	chr13	+	47129163	47130123	True	NM_001164213,NM_001164211,NM_025113,NM_015116	chr13,chr13,chr13,chr13	+,+,-,+	LRCH1,LRCH1,C13orf18,LRCH1	-1918,-1918,-167528,-1918
chr11:75142469-75142724	chr11	+	75142542	75142684	True	NR_000025,NM_001039548	chr11,chr11	+,-	SNORD15B,KLHL35	-27128,-868
chr2:228040041-228041419	chr2	+	228040259	228041196	True	NM_000091,NM_000092	chr2,chr2	+,-	COL4A3,COL4A4	-11030,-10984
chr15:82556502-82556764	chr15	+	82556734	82556820	True	NM_024580,NM_001008226,NM_001040610	chr15,chr15,chr15	-,+,-	EFTUD1,FAM154B,EFTUD1	-1630,-1642,-1630
chr6:155052818-155054185	chr6	+	155052866	155054220	True	NM_173515,NM_014892	chr6,chr6	-,+	CNKSR3,SCAF8	-221113,291
chr15:94925321-94926055	chr15	+	94925421	94926103	True	NM_001159644,NR_034095	chr15,chr15	+,-	MCTP2,LOC400456	-26315,944276
chr11:126084170-126085825	chr11	+	126084488	126085299	True	NM_001144827,NM_032795,NM_024556	chr11,chr11,chr11	-,-,+	RPUSD4,RPUSD4,FAM118B	-2901,-2901,-2920
chr21:30445883-30446757	chr21	+	30446216	30446774	True	NM_006585,NM_020152	chr21,chr21	-,+	CCT8,C21orf7	-206,6098
chr20:3188262-3189309	chr20	+	3188717	3189357	True	NM_033453,NM_181493,NM_023935	chr20,chr20,chr20	+,+,-	ITPA,ITPA,DDRGK1	698,698,-3422
chr6:80870167-80871250	chr6	+	80870214	80871278	True	NM_183050,NM_022726	chr6,chr6	+,-	BCKDHB,ELOVL4	-53922,-212899
chr10:75194396-75195414	chr10	+	75194445	75195392	True	NM_001024593,NM_173348	chr10,chr10	-,+	ZMYND17,FAM149B1	-1126,-266624
chr2:187588904-187589925	chr2	+	187588994	187589643	True	NM_182521,NM_177454	chr2,chr2	-,+	ZSWIM2,FAM171B	124305,-30269
chr9:35080940-35081983	chr9	+	35081445	35082006	True	NM_007126,NM_203299,NM_004629	chr9,chr9,chr9	-,+,-	VCP,C9orf131,FANCG	-8706,-39279,-1432
chr17:76841158-76841777	chr17	+	76841193	76841552	True	NM_030968,NM_025090	chr17,chr17	+,-	C1QTNF1,USP36	178698,-4224
chr15:41695763-41696242	chr15	+	41695861	41696193	True	NM_016013,NM_015138	chr15,chr15	-,+	NDUFAF1,RTF1	-1219,13108
chr8:79577904-79578148	chr8	+	79577905	79578149	True	NM_016010,NM_000880	chr8,chr8	+,-	FAM164A,IL7	132,139659
chr16:19081399-19082548	chr16	+	19081466	19082403	True	NM_015092,NM_001190983,NM_016138	chr16,chr16,chr16	-,+,+	SMG1,COQ7,COQ7	-143740,-2278,-2600
chr17:57696653-57697087	chr17	+	57696679	57696981	True	NM_004859,NM_016077	chr17,chr17	+,-	CLTC,PTRH2	68,87925
chr11:5841738-5842077	chr11	+	5841790	5842062	True	NM_001005167,NM_001005174	chr11,chr11	-,+	OR52E6,OR52N2	21115,-275
chrX:66785291-66785746	chrX	+	66785290	66785534	True	NM_001011645,NM_002547	chrX,chrX	+,-	AR,OPHN1	3148,867821
chr12:113441446-113443277	chr12	+	113441600	113443196	True	NM_016817,NM_001193521	chr12,chr12	+,-	OAS2,RASAL1	-25390,130417
chr22:18957352-18957786	chr22	+	18957392	18957806	True	NR_002733,NM_016335	chr22,chr22	+,-	DGCR5,PRODH	220,-33326
chr11:68519023-68519513	chr11	+	68519234	68519308	True	NM_001039656,NM_015973,NM_004923	chr11,chr11,chr11	-,+,-	MTL5,GAL,MTL5	-246,-67302,-246
chr1:154841265-154841700	chr1	+	154841264	154841672	True	NM_001826,NM_001204087,NM_002249,NM_170782	chr1,chr1,chr1,chr1	+,-,-,-	CKS1B,KCNN3,KCNN3,KCNN3	105445,1132,1132,-8926
chr2:191957052-191958000	chr2	+	191957173	191957819	True	NM_001130158,NM_003151	chr2,chr2	+,-	MYO1B,STAT4	152287,58156
chr10:81707368-81708152	chr10	+	81707451	81708105	True	NR_002724,NM_003019	chr10,chr10	+,-	MBL1P,SFTPD	-27568,806
chr1:10456836-10457532	chr1	+	10457143	10457541	True	NM_004401,NM_002631	chr1,chr1	-,+	DFFA,PGD	75130,1543
chr18:3350222-3350865	chr18	+	3350263	3350762	True	NM_019856,NM_174886	chr18,chr18	-,+	MYOM1,TGIF1	-130157,61309
chr11:108339861-108340963	chr11	+	108340344	108340996	True	NM_004398,NM_152587	chr11,chr11	+,-	DDX10,C11orf65	194819,-2086
chr11:111896437-111897577	chr11	+	111896573	111896833	True	NM_001931,NM_001082619	chr11,chr11	+,-	DLAT,PIH1D2	-1086,48112
chr4:189659618-189660287	chr6	-	153314052	153314103	True	NM_001114184,NM_194435,NM_012177,NM_019041,NM_001142522	chr6,chr6,chr6,chr6,chr6	-,+,-,-,-	MTRF1L,VIP,FBXO5,MTRF1L,FBXO5	9873,-242171,-9849,9873,-9312
chr12:42531481-42532762	chr12	+	42531611	42532408	True	NM_173601,NM_001099650,NM_201438	chr12,chr12,chr12	-,-,+	GXYLT1,GXYLT1,PPHLN1	6316,6316,187538
chr4:101396993-101397599	chr4	+	101397166	101397323	True	NM_001159694,NR_002799	chr4,chr4	-,+	EMCN,LOC256880	41978,-525594
chr5:76384304-76384890	chr5	+	76384552	76384877	True	NR_003014,NR_024398,NM_032367	chr5,chr5,chr5	-,+,-	SNORA47,LOC728723,ZBED3	-8156,-1980,-1522
chr3:149768704-149769388	chr3	+	149768794	149769225	True	NM_053024,NR_036538	chr3,chr3	-,+	PFN2,LOC646903	-80053,-79782
chr7:44798535-44799086	chr7	+	44798702	44798918	True	NM_174929,NM_138635	chr7,chr7	+,-	ZMIZ2,H2AFV	-2966,88857
chr6:43210319-43211276	chr6	+	43210524	43211012	True	NM_032538,NM_199184	chr6,chr6	+,-	TTBK1,C6orf108	209,-13313
chr1:29210302-29210640	chr1	+	29210317	29210511	True	NM_004437,NM_203343,NM_203342,NM_001171868,NM_001166005,NM_001166007	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,-,+,+	EPB41,EPB41,EPB41,TMEM200B,EPB41,EPB41	3091,3091,3091,238552,3091,3091
chr16:4383539-4383833	chr16	+	4383753	4383821	True	NM_032575,NM_016069	chr16,chr16	+,-	GLIS2,PAM16	-1579,17602
chr5:112091526-112093436	chr5	+	112091728	112093116	True	NM_001127510,NM_005669	chr5,chr5	+,-	APC,REEP5	-18228,164972
chr12:100527528-100529338	chr12	+	100527606	100529391	True	NR_031728,NM_015054,NM_001006947	chr12,chr12,chr12	+,-,-	MIR1827,UHRF1BP1L,UHRF1BP1L	54270,7306,7306
chr19:53868590-53868851	chr19	+	53868626	53868782	True	NM_033341,NR_003699	chr19,chr19	-,+	BIRC8,ZNF525	-73751,185
chr8:120842297-120844253	chr8	+	120842432	120843786	True	NM_003184,NM_022783	chr8,chr8	-,+	TAF2,DEPTOR	1346,42113
chr2:44502290-44502776	chr2	+	44502577	44502767	True	NM_001042385,NM_000341	chr2,chr2	-,+	PREPL,SLC3A1	84171,-31
chr1:147032087-147033827	chr1	+	147032664	147033823	True	NM_004326,NM_016361	chr1,chr1	+,-	BCL9,ACP6	-19533,108862
chrX:135281262-135283042	chrX	+	135281429	135282907	True	NM_001173517,NM_001159701,NM_001159699	chrX,chrX,chrX	-,+,+	MAP7D3,FHL1,FHL1	50881,-2575,-2433
chr11:57228345-57228612	chr11	+	57228348	57228598	True	NM_017611,NM_178570	chr11,chr11	-,+	SLC43A3,RTN4RL2	-33295,-60
chr8:12296938-12298060	chr8	+	12297131	12297478	True	NR_026789,NM_001137610	chr8,chr8	+,-	FAM66A,FAM86B2	-77661,-3279
chr19:46143772-46144242	chr19	+	46144075	46144289	True	NR_029886,NM_012155,NM_001193268,NM_001193269,NM_000164,NR_034098	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,+,-	MIR330,EML2,EML2,EML2,GIPR,EML2	-1730,-1400,4536,2746,27212,-1400
chr9:100456553-100457404	chr9	+	100456608	100457445	True	NM_000380,NR_027302,NM_002486	chr9,chr9,chr9	-,-,+	XPA,XPA,NCBP1	2299,2299,-60958
chr9:17578389-17578858	chr9	+	17578389	17578721	True	NM_003026,NM_017637	chr9,chr9	+,-	SH3GL2,BNC2	231,-707603
chr8:87527041-87528911	chr8	+	87527435	87528772	True	NM_016033,NM_003909	chr8,chr8	-,+	FAM82B,CPNE3	-6426,-830
chr4:5891167-5891695	chr4	+	5891329	5891625	True	NM_001313,NM_153717,NM_001014809	chr4,chr4,chr4	-,+,-	CRMP1,EVC,CRMP1	-1014,-178457,3210
chr4:40632545-40632991	chr4	+	40632595	40632977	True	NM_001098634,NM_024677	chr4,chr4	-,+	RBM47,NSUN7	-712,118936
chrX:118744170-118745650	chrX	+	118744309	118745163	True	NM_001173487,NM_181777,NM_017544	chrX,chrX,chrX	-,+,-	NKRF,UBE2A,NKRF	-4463,-30068,-4463
chr1:226625036-226626748	chr1	+	226625040	226626769	True	NM_001618,NM_001003665	chr1,chr1	-,+	PARP1,C1orf95	-29239,109731
chr6:43970140-43970466	chr6	+	43970234	43970506	True	NM_001171992,NM_153246,NM_032111	chr6,chr6,chr6	+,+,-	C6orf223,C6orf223,MRPL14	-1948,-1948,124735
chr14:101398700-101400025	chr14	+	101398974	101399887	True	NR_003229,NR_003230,NR_003232,NR_003233,NR_003234,NR_003235,NM_001134888	chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,+,+,+,-	SNORD113-1,SNORD113-2,SNORD113-4,SNORD113-5,SNORD113-6,SNORD113-7,RTL1	-7868,-5347,2940,4636,6005,7575,-47790
chr16:31103421-31103900	chr16	+	31103749	31103925	True	NM_001122957,NM_024006,NM_206824,NM_001039503	chr16,chr16,chr16,chr16	+,-,-,-	BCKDK,VKORC1,VKORC1,PRSS53	15736,2401,2401,-3619
chr7:100729696-100730469	chr7	+	100730238	100730468	True	NM_003378,NM_030961	chr7,chr7	-,+	VGF,TRIM56	78434,-1503
chr12:121018539-121018850	chr12	+	121018565	121018719	True	NM_014868,NM_015918,NM_198202	chr12,chr12,chr12	+,-,-	RNF10,POP5,POP5	-46496,528,532
chr3:50388091-50388303	chr3	+	50388137	50388341	True	NM_015896,NM_007022,NM_007024,NM_006545,NM_007182,NM_170714	chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-	ZMYND10,CYB561D2,TMEM115,NPRL2,RASSF1,RASSF1	-4981,-31,8648,195,-9770,-9770
chr16:228315-228674	chr16	+	228319	228607	True	NM_001077350,NM_000558,NM_000517,NM_005331	chr16,chr16,chr16,chr16	-,+,+,+	NPRL3,HBA1,HBA2,HBQ1	-39647,-1692,-5525,1725
chr19:50086847-50087473	chr19	+	50086879	50087371	True	NM_015953,NM_000951,NM_020719	chr19,chr19,chr19	-,+,+	NOSIP,PRRG2,PRR12	-3076,-2343,7540
chr11:17754624-17755935	chr11	+	17754687	17755930	True	NM_004976,NM_153676,NM_001112741	chr11,chr11,chr11	+,-,+	KCNC1,USH1C,KCNC1	1564,-188724,1564
chr19:15795541-15795747	chr19	+	15795611	15795787	True	NM_023944,NR_033864	chr19,chr19	+,-	CYP4F12,CYP4F24P	-11779,95061
chr2:97932259-97932553	chr2	+	97932411	97932533	True	NM_199336,NM_001164315	chr2,chr2	-,+	FAHD2B,ANKRD36	-171829,-153229
chr2:97932259-97932553	chr2	-	98106744	98107084	False	NM_025190,NM_001862	chr2,chr2	-,+	ANKRD36B,COX5B	99612,155436
chr1:110008044-110008468	chr1	+	110008241	110008311	True	NM_001199774,NM_001040709	chr1,chr1	-,+	PSMA5,SYPL2	-39133,788
chr12:13154644-13155616	chr12	+	13154659	13155257	True	NM_015987,NR_002774	chr12,chr12	-,+	HEBP1,HTR7P1	-1416,-1334
chr21:46492632-46492910	chr21	+	46492648	46492928	True	NM_001112,NM_001160230,NR_027292,NM_015834,NR_027674,NR_027672,NR_027673,NM_015833	chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21	+,+,-,+,+,+,+,+	ADARB1,ADARB1,C21orf122,ADARB1,ADARB1,ADARB1,ADARB1,ADARB1	1564,1564,248,1564,1564,1564,1564,1564
chr9:88971381-88973053	chr9	+	88971625	88973105	True	NM_001185059,NM_001185074,NM_024617,NM_024635	chr9,chr9,chr9,chr9	-,-,-,+	ZCCHC6,ZCCHC6,ZCCHC6,NAA35	-2223,-2223,-2223,-415619
chr19:51306193-51307254	chr19	+	51306216	51307278	True	NR_003067,NR_003069,NR_003068,NM_033068,NM_199249,NM_199250	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,+,-,-	SNORD88A,SNORD88C,SNORD88B,ACPT,C19orf48,C19orf48	-3424,-538,-3834,-12597,746,744
chr11:65150368-65150753	chr11	+	65150393	65150793	True	NM_031904,NM_182556,NM_001077241	chr11,chr11,chr11	+,-,-	FRMD8,SLC25A45,SLC25A45	3247,-251,-251
chr12:56552164-56553909	chr12	+	56552465	56553877	True	NM_021019,NM_002475,NM_079423,NM_001130420,NM_001199629	chr12,chr12,chr12,chr12,chr12	+,+,+,-,+	MYL6,MYL6B,MYL6,SMARCC2,MYL6B	-471,-6312,-471,29524,-6312
chr9:113087082-113088092	chr9	+	113087492	113088147	True	NM_001136562,NM_001003936	chr9,chr9	+,-	AKAP2,TXNDC8	-199773,12036
chr18:61637877-61638153	chr18	+	61638040	61638186	True	NM_198833,NR_027245,NM_002640,NM_001031848	chr18,chr18,chr18,chr18	+,-,+,+	SERPINB8,C18orf20,SERPINB8,SERPINB8	-835,178124,-835,-835
chr11:107587602-107588427	chr11	+	107587806	107588242	True	NR_028328,NM_003063	chr11,chr11	+,-	LOC643923,SLN	-125388,-5019
chr1:153390353-153390619	chr1	+	153390415	153390653	True	NM_001045479,NM_176823	chr1,chr1	-,+	S100A7L2,S100A7A	21900,-1467
chr21:44850459-44850684	chr21	+	44850463	44850553	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	19350,-3461
chr3:11314333-11314646	chr3	+	11314396	11314686	True	NM_006395,NM_001144912,NM_001136031,NM_001128221	chr3,chr3,chr3,chr3	+,+,+,-	ATG7,ATG7,ATG7,VGLL4	-437,-437,-437,295770
chr17:43862431-43862718	chr17_ctg5_hap1	-	1004853	1005093	False	NM_001145146,NM_001145147,NR_024559,NM_004382,NM_001145148	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	-,-,+,-,-	CRHR1,CRHR1,LOC100128977,CRHR1,CRHR1	840,840,-110210,840,840
chr17:43862431-43862718	chr17	+	43862435	43862675	True	NM_001145146,NM_001145147,NR_024559,NM_004382,NM_001145148	chr17,chr17,chr17,chr17,chr17	+,+,-,+,+	CRHR1,CRHR1,LOC100128977,CRHR1,CRHR1	-840,-840,110254,-840,-840
chr10:7454901-7455195	chr10	+	7454901	7455221	True	NM_002216,NM_001018039,NM_001029880	chr10,chr10,chr10	+,-,-	ITIH2,SFMBT2,SFMBT2	290014,-3598,-1453
chr17:7740338-7741583	chr17	+	7740557	7741483	True	NM_032356,NM_001080424	chr17,chr17	-,+	LSMD1,KDM6B	19739,1751
chr17:40174507-40175793	chr17	+	40174553	40175737	True	NM_003315,NM_001144766,NR_029431,NM_001144929,NM_001144928,NM_017595,NM_001144927,NM_001001349	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,+,+,+,+,+	DNAJC7,DNAJC7,DNAJC7,NKIRAS2,NKIRAS2,NKIRAS2,NKIRAS2,NKIRAS2	-4838,-5370,-4838,-2517,-2517,-2517,-2517,-5010
chr1:172502732-172503046	chr1	+	172502755	172503087	True	NM_016227,NM_153747,NM_014283	chr1,chr1,chr1	+,-,+	C1orf9,PIGC,C1orf9	-489,-89525,-546
chr10:69882631-69882851	chr10	+	69882748	69882857	True	NM_032578,NM_022079	chr10,chr10	+,-	MYPN,HERC4	-13558,-47645
chr2:134887001-134887480	chr2	+	134887045	134887355	True	NM_207481,NR_037450	chr2,chr2	-,+	NCKAP5,MIR3679	-561014,-2406
chr12:8662308-8662934	chr12	+	8662344	8662948	True	NM_014358,NM_080387	chr12,chr12	-,+	CLEC4E,CLEC4D	30662,3187
chr4:176905540-176907047	chr4	+	176905897	176906814	True	NM_170710,NM_005277	chr4,chr4	+,-	WDR17,GPM6A	80170,16890
chr1:147017124-147017962	chr1	+	147017152	147017811	True	NM_004326,NM_016361	chr1,chr1	+,-	BCL9,ACP6	-4021,124882
chr12:71116342-71118073	chr12	+	71116391	71118064	True	NM_130846,NM_014505	chr12,chr12	-,+	PTPRR,KCNMB4	30358,-356388
chr7:100966551-100967021	chr7	+	100966603	100966672	True	NM_001130821,NM_001130820,NM_022777,NM_001130822,NM_133457	chr7,chr7,chr7,chr7,chr7	-,-,-,-,+	RABL5,RABL5,RABL5,RABL5,EMID2	-1510,-1510,-1510,-1510,39449
chr5:7395660-7395966	chr5	+	7395723	7395961	True	NR_033906,NM_020546	chr5,chr5	-,+	LOC442132,ADCY2	-88896,381
chr12:71112833-71113147	chr12	+	71112922	71113136	True	NM_130846,NM_014505	chr12,chr12	-,+	PTPRR,KCNMB4	35279,-352912
chr11:119601088-119601378	chr11	+	119601095	119601376	True	NM_203286,NM_203285,NR_034160,NM_002855	chr11,chr11,chr11,chr11	-,-,+,-	PVRL1,PVRL1,LOC100499227,PVRL1	-1660,-1660,-348658,-1660
chr3:183894232-183895027	chr3	+	183894254	183895026	True	NM_005787,NM_001025205,NM_018358,NM_004068	chr3,chr3,chr3,chr3	-,+,+,+	ALG3,AP2M1,ABCF3,AP2M1	71783,-1671,8836,-1671
chr3:16646737-16646969	chr3	+	16646784	16646942	True	NM_001144382,NM_001351,NM_001190811	chr3,chr3,chr3	+,-,-	PLCL2,DAZL,DAZL	279509,114,-487
chr19:54704806-54705063	chr19	+	54704808	54704972	True	NM_001013,NM_001146082,NM_001077446	chr19,chr19,chr19	+,-,+	RPS9,MBOAT7,TSEN34	-133,-11075,-9755
chr11:118842953-118843423	chr11	+	118842976	118843226	True	NR_003040,NM_181721	chr11,chr11	-,+	RPL23AP64,FOXR1	31127,-610
chr2:131487716-131489323	chr2	+	131487816	131489184	True	NM_207364,NM_001079530	chr2,chr2	+,-	GPR148,CFC1B	-1237,-130565
chr8:103937372-103939057	chr8	+	103937407	103938820	True	NM_148174,NM_001695	chr8,chr8	-,+	AZIN1,ATP6V1C1	-61010,94427
chr9:35163442-35164172	chr9	+	35163606	35163904	True	NM_006377,NM_025182	chr9,chr9	+,-	UNC13B,KIAA1539	-1668,-47713
chr11:16758844-16760155	chr11	+	16759118	16760000	True	NM_014267,NM_033326	chr11,chr11	+,-	C11orf58,SOX6	147,-261183
chr20:34824648-34825999	chr20	+	34824805	34826051	True	NR_027451,NM_015511	chr20,chr20	-,+	LOC647979,C20orf4	-185923,-409
chr4:37269278-37270849	chr4	+	37269539	37270885	True	NM_001085399,NM_001144990	chr4,chr4	-,+	RELL1,KIAA1239	417164,-22900
chr16:56686174-56686500	chr16	+	56686287	56686481	True	NM_005947,NM_005949,NR_003658,NM_005950,NR_027781	chr16,chr16,chr16,chr16,chr16	+,+,+,-,+	MT1B,MT1F,MT1DP,MT1G,MT1DP	-527,5373,-8622,15546,-8739
chr2:219430044-219430626	chr2	+	219430141	219430466	True	NM_005444,NM_020935	chr2,chr2	+,-	RQCD1,USP37	3211,2677
chr1:226486924-226487798	chr1	+	226487323	226487552	True	NM_173083,NM_031944	chr1,chr1	-,+	LIN9,MIXL1	9702,-75999
chr16:50711211-50711494	chr16	+	50711278	50711470	True	NM_153337,NM_022162,NM_182854,NM_001144972	chr16,chr16,chr16,chr16	-,+,-,-	SNX20,NOD2,SNX20,SNX20	3844,19579,3844,3844
chr1:150955925-150956487	chr1	+	150955927	150956486	True	NM_003568,NM_022075,NM_181746	chr1,chr1,chr1	+,-,-	ANXA9,LASS2,LASS2	-1479,-8487,-8487
chr7:127636116-127636774	chr7	+	127636360	127636748	True	NM_022143,NR_027330	chr7,chr7	-,+	LRRC4,C7orf54	34304,813
chr9:35103348-35103708	chr9	+	35103372	35103749	True	NM_032634,NM_006377,NM_152850,NM_013442,NM_001201484	chr9,chr9,chr9,chr9,chr9	-,+,-,-,-	PIGO,UNC13B,PIGO,STOML2,PIGO	-6826,58239,-6774,-218,-6826
chr16:62061858-62062127	chr16	+	62061857	62061935	True	NM_001796,NM_024860	chr16,chr16	-,+	CDH8,SETD6	8868,-3512526
chr19:18744441-18745964	chr19	+	18744668	18746004	True	NM_004750,NM_018316	chr19,chr19	-,+	CRLF1,KLHL26	-27008,1833
chr1:180992083-180992781	chr1	+	180992088	180992658	True	NM_001195035,NM_001195000,NM_001194999,NM_005819,NM_001531	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	MR1,MR1,MR1,STX6,MR1	9902,9902,9902,-42,9902
chr17:48291685-48291911	chr17	+	48291737	48291903	True	NM_001135697,NM_000088	chr17,chr17	+,-	SGCA,COL1A1	-48435,-12737
chr1:85932857-85934498	chr1	+	85932943	85933920	True	NM_001554,NM_012137	chr1,chr1	+,-	CYR61,DDAH1	112523,-2054
chr10:125651450-125651788	chr10	+	125651589	125651787	True	NM_198148,NM_153442	chr10,chr10	-,+	CPXM2,GPR26	-89,-225770
chr17:74734440-74735968	chr17	+	74734493	74735623	True	NR_036608,NM_003016,NM_024311,NR_030366,NM_001195427	chr17,chr17,chr17,chr17,chr17	-,-,+,-,-	SRSF2,SRSF2,MFSD11,MIR636,SRSF2	-1000,-1000,-762,-1863,-1000
chrX:39958637-39959265	chrX	+	39958712	39959312	True	NM_005765,NM_001123385,NM_017745	chrX,chrX,chrX	+,-,-	ATP6AP2,BCOR,BCOR	480903,-1993,-1993
chr1:40237399-40237681	chr1	+	40237561	40237667	True	NM_022120,NM_001195007	chr1,chr1	-,+	OXCT2,PPIE	-541,-33095
chr1:40237399-40237681	chr1	-	39979888	39979994	False	NR_003929,NM_181809	chr1,chr1	-,+	PPIEL,BMP8A	45426,-22621
chr3:101282295-101283192	chr3	+	101282317	101282989	True	NM_020654,NM_017819	chr3,chr3	-,+	SENP7,RG9MTD1	-50232,-1656
chr4:37826352-37827620	chr4	+	37826537	37827440	True	NM_001085400,NM_018290	chr4,chr4	-,+	RELL1,PGM2	-138538,841
chr1:31228775-31229779	chr1	+	31229039	31229601	True	NM_006762,NR_034182	chr1,chr1	-,+	LAPTM5,LOC100129196	1132,-37472
chr9:125591243-125591661	chr9	+	125591464	125591570	True	NM_080859,NM_005388	chr9,chr9	+,-	OR1K1,PDCL	-29114,-529
chr5:96141648-96143210	chr5	+	96141807	96142940	True	NM_001198541,NM_001040458,NM_016442,NR_033798	chr5,chr5,chr5,chr5	-,-,-,+	ERAP1,ERAP1,ERAP1,CAST	6965,1009,1009,-62615
chr12:109913136-109914832	chr12	+	109913434	109914846	True	NM_183415,NM_031954,NM_130466	chr12,chr12,chr12	+,-,+	UBE3B,KCTD10,UBE3B	592,359,592
chr2:96975643-96977265	chr2	+	96976116	96977317	True	NM_014014,NM_001008949	chr2,chr2	-,+	SNRNP200,ITPRIPL1	-4809,13744
chr11:111847467-111847973	chr11	+	111847500	111847965	True	NM_001885,NM_033425	chr11,chr11	-,+	CRYAB,DIXDC1	-65027,67
chr20:56138380-56138723	chr20	+	56138459	56138697	True	NM_080618,NM_002591	chr20,chr20	-,+	CTCFL,PCK1	-38305,-2374
chr2:159335894-159336449	chr2	+	159336108	159336438	True	NM_001171637,NM_003628	chr2,chr2	-,+	CCDC148,PKP4	-22843,-22696
chr12:7271756-7271986	chr12	+	7271881	7271963	True	NR_026947,NM_014718,NM_031491	chr12,chr12,chr12	+,+,-	LOC283314,CLSTN3,RBP5	-11028,11003,9553
chr1:160147751-160147999	chr1	+	160147792	160147877	True	NM_052868,NM_001001734	chr1,chr1	-,+	IGSF8,ATP1A4	-79384,-650
chr20:44035884-44036134	chr20	+	44036053	44036175	True	NM_015937,NM_001184730,NM_001197140,NM_014477,NM_001184729,NM_001184728,NM_001197139,NM_001048226,NM_001048225,NM_001048224,NM_001048223,NM_001048222,NM_001048221,NM_018478	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,+,+,-,+,+,+,+,+,+,+,+,+,+	PIGT,PIGT,DBNDD2,TP53TG5,PIGT,PIGT,DBNDD2,DBNDD2,DBNDD2,DBNDD2,DBNDD2,DBNDD2,DBNDD2,DBNDD2	8531,8531,-1283,-29096,8531,8531,-1471,453,453,-876,-876,-1449,-1449,-1243
chr1:194159496-194160077	chr1	+	194159496	194160126	True	NM_003783,NR_031691	chr1,chr1	-,+	B3GALT2,MIR1278	-1003753,-1053914
chrX:151998205-151999119	chrX	+	151998226	151999136	True	NM_015922,NM_004344,NM_001129765	chrX,chrX,chrX	+,-,+	NSDHL,CETN2,NSDHL	374,215,374
chr16:79632623-79632935	chr16	+	79632639	79632917	True	NM_005360,NM_130897,NM_001031804	chr16,chr16,chr16	-,+,-	MAF,DYNLRB2,MAF	1755,941936,1755
chrX:8768977-8769200	chrX	+	8769172	8769244	True	NM_174951,NM_001001888,NM_001171186	chrX,chrX,chrX	-,+,-	FAM9A,VCX3B,FAM9A	230,-336352,184
chr15:99194170-99194429	chr15	+	99194204	99194360	True	NM_182562,NM_000875	chr15,chr15	-,+	FAM169B,IGF1R	-136593,-1501
chr14:102197275-102197701	chr14	+	102197288	102197645	True	NR_026774,NR_031649	chr14,chr14	+,-	NCRNA00239,MIR1247	-565,-170529
chr12:54454726-54455654	chr12	+	54454811	54455499	True	NM_153633,NR_026655,NR_026658	chr12,chr12,chr12	+,+,-	HOXC4,FLJ12825,LOC100240735	-7201,-2824,20158
chr7:123511539-123512454	chr7	+	123511682	123512489	True	NM_003941,NM_012269	chr7,chr7	-,+	WASL,HYAL4	-122566,-26517
chr15:68721594-68723223	chr15	+	68721734	68723164	True	NM_006091,NM_001004439	chr15,chr15	+,-	CORO2B,ITGA11	148408,1378
chrY:1337819-1338204	chrY	+	1337858	1338229	True	NM_172249,NM_001161529,NM_006140,NM_001161532,NM_022148,NM_172246,NM_172245,NR_027760,NM_001161531	chrY,chrY,chrY,chrY,chrY,chrY,chrY,chrY,chrY	+,+,+,+,-,+,+,+,+	CSF2RA,CSF2RA,CSF2RA,CSF2RA,CRLF2,CSF2RA,CSF2RA,CSF2RA,CSF2RA	-216,-216,-216,-216,-56328,-216,-216,-216,-216
chrY:1337819-1338204	chrX	+	1387858	1388229	False	NM_172249,NM_001161529,NM_006140,NM_001161532,NM_022148,NM_172246,NM_172245,NR_027760,NM_001161531	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,-,+,+,+,+	CSF2RA,CSF2RA,CSF2RA,CSF2RA,CRLF2,CSF2RA,CSF2RA,CSF2RA,CSF2RA	-216,-216,-216,-216,-56328,-216,-216,-216,-216
chr2:27545833-27546114	chr2	+	27545837	27546081	True	NM_187841,NM_002437	chr2,chr2	+,-	TRIM54,MPV17	-40591,-62
chr1:70385989-70387902	chr1	+	70386306	70387544	True	NM_017768,NR_023916	chr1,chr1	-,+	LRRC40,PIN1P1	283880,-1352
chr22:39851573-39852138	chr22	+	39851574	39852074	True	NM_002409,NM_194326	chr22,chr22	+,-	MGAT3,RPS19BP1	1250,76836
chr11:117949882-117950296	chr11	+	117949886	117950314	True	NM_001173551,NM_001173552,NM_001142349,NM_001083947,NM_019894	chr11,chr11,chr11,chr11,chr11	+,+,-,+,+	TMPRSS4,TMPRSS4,SCN4B,TMPRSS4,TMPRSS4	-2210,-2210,65920,-2210,-2210
chr2:157188827-157189056	chr2	+	157188894	157189022	True	NM_001083112,NM_006186	chr2,chr2	+,-	GPD2,NR4A2	102942,315
chr11:93390624-93391817	chr11	+	93390878	93391776	True	NM_033395,NR_003028	chr11,chr11	+,-	KIAA1731,SNORA25	3039,72086
chr8:144347592-144348204	chr8	+	144347774	144348022	True	NM_052963,NM_138465	chr8,chr8	-,+	TOP1MT,GLI4	69078,1584
chr2:27580128-27580446	chr2	+	27580139	27580261	True	NM_001035521,NM_001521,NM_014748	chr2,chr2,chr2	-,-,+	GTF3C2,GTF3C2,SNX17	-271,-271,13127
chr9:84304775-84304981	chr9	+	84304781	84304891	True	NM_005077,NR_026851	chr9,chr9	-,+	TLE1,FAM75D5	-1185,223460
chr14:77265929-77267120	chr14	+	77266274	77267046	True	NM_015305,NM_194287	chr14,chr14	-,+	ANGEL1,C14orf166B	12288,25678
chr3:126079665-126080405	chr3	+	126079783	126080421	True	NM_182628,NM_014079	chr3,chr3	+,-	CCDC37,KLF15	33360,-3547
chr4:186874390-186875006	chr4	+	186874532	186875004	True	NM_021069,NM_003265	chr4,chr4	-,+	SORBS2,TLR3	2916,115304
chr17:56596671-56597100	chr17	+	56596937	56597005	True	NR_037156,NR_037155,NM_002876,NM_004687,NM_004574	chr17,chr17,chr17,chr17,chr17	-,-,+,-,-	SEPT4,SEPT4,RAD51C,MTMR4,SEPT4	8419,9823,172957,-1686,9823
chr2:31429240-31430554	chr2	+	31429495	31430255	True	NM_014600,NM_001145122	chr2,chr2	+,-	EHD3,CAPN14	26624,10214
chr1:48338056-48338661	chr1	+	48338314	48338566	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	124046,349790
chr13:111606385-111607522	chr13	+	111606502	111607516	True	NM_017664,NM_001113511	chr13,chr13	-,+	ANKRD10,ARHGEF7	-39086,160107
chr3:186999040-187000010	chr3	+	186999063	186999919	True	NM_001879,NM_139125,NR_033519,NM_001031849,NM_153708	chr3,chr3,chr3,chr3,chr3	-,-,-,-,+	MASP1,MASP1,MASP1,MASP1,RTP1	9941,9941,9941,9941,-83840
chr22:19460644-19461787	chr22	+	19460715	19461777	True	NM_005659,NM_001178010,NM_001178011,NM_001035247,NM_003504	chr22,chr22,chr22,chr22,chr22	-,+,+,-,+	UFD1L,CDC45,CDC45,UFD1L,CDC45	5011,5636,5636,5011,5638
chr3:187929511-187929737	chr3	+	187929514	187929588	True	NM_005578,NR_036497	chr3,chr3	+,-	LPP,LOC339929	1132,-57638
chr16:20912523-20912739	chr16	+	20912549	20912697	True	NM_001128301,NM_001128302,NM_173475,NM_020424	chr16,chr16,chr16,chr16	+,+,-,+	LYRM1,LYRM1,DCUN1D3,LYRM1	-525,-525,-988,-1043
chr12:117352345-117353548	chr12	+	117352745	117353253	True	NM_012174,NM_003806,NM_153348	chr12,chr12,chr12	+,-,+	FBXW8,HRK,FBXW8	-4043,-33513,-4043
chr15:25065741-25067143	chr15	+	25066175	25066931	True	NM_022807,NM_022806,NM_130838,NM_022808	chr15,chr15,chr15,chr15	+,+,-,+	SNRPN,SNRPN,UBE3A,SNRPN	1862,1862,583772,1862
chr19:51516115-51516771	chr19	+	51516217	51516682	True	NM_012315,NM_145888,NM_001077500,NM_002776,NM_014441	chr19,chr19,chr19,chr19,chr19	-,-,-,-,+	KLK9,KLK10,KLK10,KLK10,SIGLEC9	-3327,6334,6811,6662,111454
chr10:112256238-112256727	chr10	+	112256396	112256578	True	NM_005871,NM_004419	chr10,chr10	-,+	SMNDC1,DUSP5	-191689,1046
chrX:51357727-51358577	chrX	+	51357744	51358406	True	NR_033772	chrX	-	CENPVL1	67099
chr16:6822156-6824138	chr16	+	6822243	6824162	True	NM_201598,NM_001142334	chr16,chr16	-,+	FAM86A,RBFOX1	-1674454,-188
chr6:41747903-41748153	chr6	+	41747959	41748202	True	NM_001134493,NM_013397,NM_006653	chr6,chr6,chr6	+,+,-	TOMM6,PRICKLE4,FRS3	6978,297,-329
chr20:46128800-46130311	chr20	+	46129380	46130346	True	NM_006534,NM_001174088,NM_001174087,NM_181659,NM_183048	chr20,chr20,chr20,chr20,chr20	+,+,+,+,-	NCOA3,NCOA3,NCOA3,NCOA3,ZMYND8	254,254,254,254,-143906
chr10:50117581-50118157	chr10	+	50117688	50118134	True	NM_020945,NM_001006939	chr10,chr10	+,-	WDFY4,LRRC18	-224228,4196
chr19:42348734-42349226	chr19	+	42348905	42349205	True	NM_173506,NM_001040283	chr19,chr19	-,+	LYPD4,DMRTC2	-397,44
chr19:23407563-23408213	chr19	+	23407805	23408073	True	NR_003662,NM_003430	chr19,chr19	+,-	RPSAP58,ZNF91	537742,170252
chr3:148704652-148705045	chr3	+	148704673	148705091	True	NM_001184721,NM_001184720,NM_004130,NM_003071	chr3,chr3,chr3,chr3	+,+,+,-	GYG1,GYG1,GYG1,HLTF	4103,4103,4103,99300
chr11:833579-833825	chr11	+	833666	833760	True	NM_003271,NM_001039490,NM_021128,NM_173584,NM_001025239,NM_139030,NM_004357,NM_001025238,NM_139029,NM_001025235,NM_001025236	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,-,+,+,+,+,+,+,+,+	TSPAN4,CD151,POLR2L,EFCAB4A,TSPAN4,CD151,CD151,TSPAN4,CD151,TSPAN4,TSPAN4	9063,-765,8819,-6132,9063,-765,-765,9063,-765,9180,9180
chr8:66687052-66688156	chr8	+	66687061	66687870	True	NM_002603,NM_001145838	chr8,chr8	-,+	PDE7A,MTFR1	13502,-105017
chr20:34743090-34743943	chr20	+	34743292	34743892	True	NM_012156,NR_027451	chr20,chr20	+,-	EPB41L1,LOC647979	-681,-104410
chr11:18748349-18748604	chr11	+	18748361	18748449	True	NM_153347,NM_173588	chr11,chr11	+,-	TMEM86A,IGSF22	-28061,-584
chr16:11839612-11841492	chr16	+	11839854	11841374	True	NM_003498,NM_015914	chr16,chr16	+,-	SNN,TXNDC11	-77617,-3206
chr16:57317992-57318204	chr16	+	57318045	57318107	True	NM_015993,NM_012106	chr16,chr16	-,+	PLLP,ARL2BP	527,-39058
chr7:104888392-104888625	chr7	+	104888587	104888672	True	NM_182931,NM_182691	chr7,chr7	+,-	MLL5,SRPK2	-234001,20858
chr6:118972781-118973055	chr6	+	118972962	118973076	True	NM_001042475,NM_206921,NM_002667	chr6,chr6,chr6	-,-,+	C6orf204,C6orf204,PLN	-6,-6,-103571
chr11:17757730-17758029	chr11	+	17757729	17758029	True	NM_004976,NM_153676,NM_001112741	chr11,chr11,chr11	+,-,+	KCNC1,USH1C,KCNC1	-285,-191766,-285
chr22:17639133-17639485	chr22	+	17639295	17639439	True	NM_017829,NM_033070,NR_024482,NR_024483	chr22,chr22,chr22,chr22	-,-,+,+	CECR5,CECR5,CECR4,CECR4	6788,780,839,839
chr12:121342247-121342617	chr12	+	121342254	121342634	True	NM_139015,NM_000545	chr12,chr12	-,+	SPPL3,HNF1A	-103,73914
chr2:118772330-118772723	chr2	+	118772417	118772591	True	NM_019044,NM_016133	chr2,chr2	-,+	CCDC93,INSIG2	-678,73458
chr4:71339945-71340715	chr4	+	71340340	71340590	True	NM_144646,NM_001145007,NM_152291	chr4,chr4,chr4	-,+,+	IGJ,MUC7,MUC7	191808,-2730,-2571
chr16:62068454-62068869	chr16	+	62068558	62068779	True	NM_001796,NM_024860	chr16,chr16	-,+	CDH8,SETD6	2017,-3519226
chr16:56964320-56965116	chr16	+	56964486	56965080	True	NM_001010990,NM_001010989,NM_014685,NM_024946	chr16,chr16,chr16,chr16	+,+,+,-	HERPUD1,HERPUD1,HERPUD1,FAM192A	667,667,667,254946
chr3:184433653-184434566	chr3	+	184433716	184434602	True	NM_001009921,NM_022149	chr3,chr3	+,-	VPS8,MAGEF1	95328,-3880
chr20:7915254-7916291	chr20	+	7915388	7916090	True	NM_015192,NM_017545	chr20,chr20	+,-	PLCB1,HAO1	197205,5065
chr5:1884624-1884867	chr5	+	1884647	1884871	True	NM_016358,NM_004553	chr5,chr5	-,+	IRX4,NDUFS6	-1767,-83202
chr10:75006222-75006689	chr10	+	75006248	75006602	True	NM_173348,NM_015190,NM_016065	chr10,chr10,chr10	+,-,-	FAM149B1,DNAJC9,MRPS16	-78429,473,5899
chr20:4664080-4664465	chr20	+	4664080	4664337	True	NM_000311,NM_001080121,NM_001080122,NM_001080123,NM_183079,NR_024267	chr20,chr20,chr20,chr20,chr20,chr20	+,+,+,+,+,-	PRNP,PRNP,PRNP,PRNP,PRNP,PRNT	2459,2459,2459,2819,2459,57028
chr4:123659524-123661282	chr4	+	123660159	123661150	True	NM_001178007,NM_152618,NR_024041	chr4,chr4,chr4	+,+,-	BBS12,BBS12,CETN4P	-6355,-6355,-6546
chr3:52008105-52008800	chr3	+	52008118	52008812	True	NM_001198898,NM_001198896,NM_000666,NM_001174100,NM_001198895,NR_027476,NM_001146314,NM_015407,NM_001198897,NR_037192,NM_033008,NM_032750,NM_020418	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,-,+,-,-,+,+,+,-,-,-	ACY1,ACY1,ACY1,PCBP4,ACY1,ABHD14B,ABHD14B,ABHD14A,ACY1,ABHD14A-ACY1,PCBP4,ABHD14B,PCBP4	8487,8487,8487,-6636,8487,40,40,229,8487,229,-6636,40,-6668
chr1:220721065-220721888	chr1	+	220721197	220721611	True	NM_012414,NM_018650	chr1,chr1	-,+	RAB3GAP2,MARK1	-275354,-19680
chr19:46389674-46389898	chr19	+	46389673	46389861	True	NM_004497,NM_015649	chr19,chr19	+,-	FOXA3,IRF2BP1	-22206,-297
chr16:28619467-28619682	chr16	+	28619574	28619638	True	NM_177529,NM_138414,NM_177530,NM_001055,NM_177534	chr16,chr16,chr16,chr16,chr16	-,+,-,-,-	SULT1A1,CCDC101,SULT1A1,SULT1A1,SULT1A1	1769,-54376,1061,1769,1061
chr16:1307403-1307929	chr16	+	1307402	1307766	True	NM_024164,NM_012217	chr16,chr16	-,+	TPSB2,TPSD1	-27217,-1180
chr16:4817220-4817449	chr16	+	4817265	4817343	True	NM_021646,NR_029453	chr16,chr16	-,+	ZNF500,LOC440335	-99,21054
chrX:119211504-119211748	chrX	+	119211589	119211681	True	NM_032498,NM_001099685	chrX,chrX	-,-	RHOXF2,RHOXF2B	76,76
chrX:119211504-119211748	chrX	-	119292492	119292584	False	NM_139282,NM_032498,NM_001099685	chrX,chrX,chrX	-,+,+	RHOXF1,RHOXF2,RHOXF2B	-42645,-76,-76
chr9:34645977-34646690	chr9	+	34646226	34646516	True	NM_000155,NM_147157,NM_147162,NM_005866,NM_001142784,NM_004512	chr9,chr9,chr9,chr9,chr9,chr9	+,-,+,-,+,+	GALT,SIGMAR1,IL11RA,SIGMAR1,IL11RA,IL11RA	118,-8458,7415,-8458,5665,7415
chr18:22932359-22932671	chr18	+	22932384	22932697	True	NM_015461,NM_001025096	chr18,chr18	-,+	ZNF521,PSMA8	-170,781118
chr11:127811591-127813266	chr11	+	127811798	127813302	True	NM_001162422,NM_001167681	chr11,chr11	-,+	ETS1,FLI1	578953,750508
chr8:144622206-144622484	chr8	+	144622293	144622363	True	NM_001166237,NM_015117	chr8,chr8	+,-	GSDMD,ZC3H3	13193,1313
chr1:161146270-161146805	chr1	+	161146375	161146740	True	NM_001122764,NM_001199874,NM_001199873,NM_003779	chr1,chr1,chr1,chr1	+,-,-,-	PPOX,B4GALT3,B4GALT3,B4GALT3	-10245,1068,1068,1068
chr3:184043468-184044273	chr3	+	184043489	184044164	True	NM_004953,NM_001171087,NM_001171093,NR_003055	chr3,chr3,chr3,chr3	+,-,+,+	EIF4G1,CLCN2,FAM131A,SNORD66	-5439,35278,9552,-56
chr20:2793655-2795622	chr20	+	2793763	2795107	True	NM_001167670,NM_080739,NM_019609	chr20,chr20,chr20	+,+,-	LOC100288797,C20orf141,CPXM1	1868,549,-12471
chr5:88447196-88448372	chr5	+	88447235	88448067	True	NM_001193347,NM_006467	chr5,chr5	-,+	MEF2C,POLR3G	-247313,1322613
chr14:58047203-58048560	chr14	+	58047408	58048493	True	NM_001080455,NM_001011713	chr14,chr14	-,+	SLC35F4,NAA30	15175,-190203
chr5:60238845-60240109	chr5	+	60239136	60240144	True	NM_000082,NM_174889	chr5,chr5	-,+	ERCC8,NDUFAF2	811,811
chr6:43027178-43027388	chr6	+	43027195	43027433	True	NM_015950,NM_001168370,NM_014780,NM_201521,NM_201523,NM_201522,NM_138343	chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,+,+,+,+	MRPL2,CUL7,CUL7,KLC4,KLC4,KLC4,KLC4	-9,-5512,-5512,-8,195,748,-8
chr4:153301570-153303474	chr4	+	153302257	153303489	True	NR_033797,NM_001013415	chr4,chr4	+,-	DKFZP434I0714,FBXW7	153926,227
chr1:15482225-15482703	chr1	+	15482256	15482594	True	NM_018022,NM_001136217,NM_001136218,NM_001136216,NR_027136	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	TMEM51,TMEM51,TMEM51,TMEM51,C1orf126	-2078,-3279,-2078,-3279,-3296
chr9:127954102-127954756	chr9	+	127954197	127954421	True	NM_005833,NM_001123355,NM_002721,NM_001123369,NM_001174153,NM_001174152	chr9,chr9,chr9,chr9,chr9,chr9	+,-,-,-,+,+	RABEPK,PPP6C,PPP6C,PPP6C,RABEPK,RABEPK	8440,-1979,-1979,-1979,8399,8399
chr19:2238314-2239083	chr19	+	2238421	2239045	True	NR_031596,NM_007165,NM_018049	chr19,chr19,chr19	-,+,-	MIR1227,SF3A2,PLEKHJ1	-4273,-1657,-2093
chr16:8624140-8625903	chr16	+	8624303	8625903	True	NM_001146336,NM_024109	chr16,chr16	-,+	TMEM114,METTL22	-2077,89623
chr1:110649447-110650334	chr1	+	110649650	110650234	True	NM_006492,NM_203412	chr1,chr1	-,+	ALX3,UBL4B	-36328,4827
chr21:46293721-46293969	chr21	+	46293720	46293810	True	NM_058190,NM_004339	chr21,chr21	+,-	C21orf70,PTTG1IP	66144,58
chr7:99771613-99772379	chr7	+	99771753	99772427	True	NM_024637,NM_152742,NM_012447	chr7,chr7,chr7	-,-,+	GAL3ST4,GPC2,STAG3	-5380,2613,3110
chr18:3450560-3450897	chr18	+	3450631	3450787	True	NM_019856,NM_173211,NM_173210,NM_003244,NM_170695,NM_173208,NM_173209,NM_173207	chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18	-,+,+,+,+,+,+,+	MYOM1,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1	-230525,2984,803,-510,803,-651,-709,-3074
chr1:26235892-26236140	chr1	+	26235906	26236138	True	NR_037481,NM_203401,NM_001145454,NM_005563,NM_001099626,NM_203399	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,+,-	MIR3917,STMN1,STMN1,STMN1,FAM54B,STMN1	-2961,-3262,-2913,-2913,-88638,-2538
chr8:100903675-100904517	chr8	+	100903787	100904379	True	NM_004374,NM_005034	chr8,chr8	-,+	COX6C,POLR2K	1913,258459
chr8:106337331-106338575	chr8	+	106337370	106338302	True	NM_013437,NM_012082	chr8,chr8	-,+	LRP12,ZFPM2	-736118,-6286
chr2:234196243-234196718	chr2	+	234196546	234196714	True	NR_003006,NM_018218	chr2,chr2	+,-	SCARNA6,USP40	607,277572
chr11:697756-698619	chr11	+	697831	698527	True	NM_021008,NM_001042463,NM_174940,NM_022772	chr11,chr11,chr11,chr11	-,+,+,+	DEAF1,TMEM80,TMEM80,EPS8L2	-2091,-2266,-2266,7592
chr1:34328549-34328905	chr1	+	34328616	34328952	True	NM_145205,NR_033264,NM_052896	chr1,chr1,chr1	+,+,-	HMGB4,HMGB4,CSMD2	-2591,727,302541
chr12:12509110-12509954	chr12	+	12509324	12509906	True	NM_058169,NM_018050,NR_024061	chr12,chr12,chr12	+,-,-	LOH12CR1,MANSC1,LOH12CR2	113,-6155,145
chr12:57039755-57040826	chr12	+	57039873	57040489	True	NR_002737,NM_003725,NM_001686,NM_013449,NR_003046	chr12,chr12,chr12,chr12,chr12	-,+,-,-,-	SNORD59A,HSD17B6,ATP5B,BAZ2A,SNORD59B	-988,116618,-21,-9710,-2335
chr16:3062973-3063373	chr16	+	3063100	3063410	True	NM_021195,NM_020982,NM_016639	chr16,chr16,chr16	-,+,+	CLDN6,CLDN9,TNFRSF12A	4828,-694,6902
chr6:90348507-90348712	chr6	+	90348571	90348703	True	NM_020466,NR_028495,NR_028494,NR_028493,NM_001137667	chr6,chr6,chr6,chr6,chr6	-,-,-,-,+	LYRM2,LYRM2,LYRM2,LYRM2,CASP8AP2	-97,-355,-355,-355,190915
chr16:5113982-5114758	chr16	+	5114340	5114723	True	NM_001098514,NM_152459,NM_019109	chr16,chr16,chr16	-,-,+	C16orf89,C16orf89,ALG1	1445,1445,7086
chr2:145043361-145044723	chr2	+	145043429	145044673	True	NM_001006636,NR_033870	chr2,chr2	-,+	GTDC1,DKFZp686O1327	7443,380860
chr20:3870518-3872108	chr20	+	3870772	3872141	True	NM_153640,NM_153638,NM_024960,NR_031722	chr20,chr20,chr20,chr20	+,+,+,-	PANK2,PANK2,PANK2,MIR103-2AS	-366,-1087,-1343,26119
chr6:111284308-111286003	chr6	+	111284445	111284846	True	NM_138408,NR_002932	chr6,chr6	+,-	GTF3C6,GSTM2P1	-4743,83968
chr6:137365851-137366084	chr6	+	137365964	137366026	True	NM_014432,NM_001008783	chr6,chr6	-,+	IL20RA,SLC35D3	322,-122613
chr16:67062612-67062854	chr16	+	67062705	67062783	True	NR_024525,NM_001755,NM_022845	chr16,chr16,chr16	-,+,+	FAM96B,CBFB,CBFB	-94385,266,266
chrX:102967617-102968177	chrX	+	102967745	102968007	True	NM_001024452,NM_182541	chrX,chrX	-,+	GLRA4,TMEM31	15601,-1962
chr9:46211879-46212237	chr20	-	25989942	25989998	False	NR_004846,NR_003678	chr20,chr20	+,-	LOC100134868,C20orf191	436,104731
chr9:46211879-46212237	chr9	+	46212066	46212266	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2581336,475299
chr9:46211879-46212237	chr9	-	67701044	67701140	False	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	93099,225620
chr9:46211879-46212237	chr9	-	46292166	46292216	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2661436,395349
chr9:46211879-46212237	chr9	+	45091002	45091052	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-100817,-1460272
chr9:46211879-46212237	chr9	-	44779925	44779979	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	210256,-1149195
chr2:102771648-102772322	chr2	+	102771728	102772364	True	NM_000877,NM_032718	chr2,chr2	+,-	IL1R1,MFSD9	-1377,581023
chr16:25232658-25233382	chr16	+	25232741	25233057	True	NM_001012981,NM_001169	chr16,chr16	-,+	ZKSCAN2,AQP8	35850,-4507
chr1:156161155-156162335	chr1	+	156161237	156161941	True	NM_014655,NM_198406	chr1,chr1	+,-	SLC25A44,PAQR6	1788,55903
chr11:110162872-110164838	chr11	+	110163276	110164739	True	NM_002906,NM_004109	chr11,chr11	-,+	RDX,FDX1	2760,135854
chr20:823023-823755	chr20	+	823025	823604	True	NM_031424,NM_033409,NM_001042353,NM_207121,NM_015985	chr20,chr20,chr20,chr20,chr20	+,-,+,+,-	FAM110A,C20orf54,FAM110A,FAM110A,ANGPT4	1680,-73797,-8720,-6365,73413
chr12:56584092-56584337	chr12	+	56584111	56584191	True	NM_139067,NM_003075,NM_001130420,NM_079423	chr12,chr12,chr12,chr12	-,-,-,+	SMARCC2,SMARCC2,SMARCC2,MYL6	-760,-760,-760,-32117
chr21:22380062-22381456	chr21	+	22380217	22381482	True	NM_004540,NR_024090	chr21,chr21	+,-	NCAM2,C21orf131	-9645,-204791
chr3:140661552-140662043	chr3	+	140661611	140662088	True	NM_001104647,NM_001178140,NM_018155	chr3,chr3,chr3	+,-,+	SLC25A36,TFDP2,SLC25A36	-1000,1057200,-1000
chr11:75534677-75535809	chr11	+	75534709	75535613	True	NM_003369,NM_207577	chr11,chr11	+,-	UVRAG,MAP6	-8548,-155230
chr2:105472156-105472425	chr2	+	105472208	105472460	True	NM_006236,NR_037883	chr2,chr2	+,-	POU3F3,LOC100506421	-290,-4274
chr8:91351151-91351849	chr8	+	91351267	91351859	True	NM_004929,NM_001359	chr8,chr8	-,+	CALB1,DECR1	-256160,-337738
chr8:18244091-18244310	chr8	+	18244096	18244348	True	NM_000015,NM_004315	chr8,chr8	+,-	NAT2,ASAH1	4406,-301589
chr12:85419211-85419462	chr12	+	85419229	85419302	True	NM_001100917,NM_032165	chr12,chr12	-,+	TSPAN19,LRRIQ1	10808,10796
chr11:64764013-64764596	chr11	+	64764073	64764605	True	NM_001199745,NM_138456	chr11,chr11	+,-	ARL2,BATF2	16979,-38
chr11:58347238-58349040	chr11	+	58347429	58348647	True	NM_004811,NM_001197051,NM_001143995,NR_024091,NM_053023	chr11,chr11,chr11,chr11,chr11	-,+,-,+,+	LPXN,ZFP91,LPXN,ZFP91-CNTF,ZFP91	-4039,-893,-1790,-893,-893
chr7:154798137-154799945	chr7	+	154798262	154799762	True	NR_028090,NM_007349	chr7,chr7	+,-	LOC202781,PAXIP1	-3170,-3580
chr18:5288343-5290171	chr18	+	5288557	5290215	True	NM_001143823,NM_003409,NR_026569,NR_015389	chr18,chr18,chr18,chr18	-,-,-,+	ZFP161,ZFP161,ZFP161,LOC339290	5874,5874,5535,-50510
chrX:48552929-48553341	chrX	+	48552929	48553339	True	NM_013271,NM_003173	chrX,chrX	-,+	PCSK1N,SUV39H1	140671,1791
chr7:127235824-127236311	chr7	+	127235904	127236292	True	NM_024523,NM_020369,NM_001662	chr7,chr7,chr7	-,+,+	GCC1,FSCN3,ARF5	-10250,-2266,-7549
chr3:159085102-159086789	chr3	+	159085253	159086806	True	NM_002888,NR_037483	chr3,chr3	-,+	RARRES1,MIR3919	-634978,-84881
chr19:53238427-53238777	chr19	+	53238436	53238542	True	NR_023311,NM_001161499,NM_001161500,NM_001161501,NM_030972	chr19,chr19,chr19,chr19,chr19	+,-,-,-,-	ZNF137P,ZNF611,ZNF611,ZNF611,ZNF611	-138550,-129,-129,-139,-5301
chr1:53386866-53387157	chr1	+	53387031	53387091	True	NM_001198962,NM_002979,NM_001198961,NM_001193617,NM_001193600,NM_018281,NM_001193599,NM_001007098	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,+,-,+,+,-,+,+	ECHDC2,SCP2,ECHDC2,SCP2,SCP2,ECHDC2,SCP2,SCP2	405,5809,405,5809,5809,405,5809,5809
chr19:8272940-8273469	chr19	+	8273026	8273492	True	NM_024552,NM_032447	chr19,chr19	+,-	LASS4,FBN3	724,-60641
chr8:98288608-98289324	chr8	+	98288611	98289210	True	NM_033512,NM_178812	chr8,chr8	-,+	TSPYL5,MTDH	1016,367196
chr6:108396616-108397227	chr6	+	108396910	108397244	True	NM_003269,NM_014028	chr6,chr6	+,-	NR2E1,OSTM1	89970,-969
chr12:42984174-42984551	chr12	+	42984183	42984534	True	NM_016488,NM_153026	chr12,chr12	+,-	PPHLN1,PRICKLE1	-264287,-611
chrX:153998507-153999750	chrX	+	153998811	153999127	True	NR_002984,NM_080612,NM_001363,NR_002969,NM_001142463	chrX,chrX,chrX,chrX,chrX	+,-,+,+,+	SNORA56,GAB3,DKC1,SNORA36A,DKC1	4145,-19463,-7831,-2059,-7831
chr2:55252521-55253094	chr2	+	55252524	55253070	True	NM_007008,NM_001135592	chr2,chr2	-,+	RTN4,RPS27A	-15054,205968
chr2:152120167-152121661	chr2	+	152120536	152121460	True	NM_007115,NM_198557	chr2,chr2	+,-	TNFAIP6,RBM43	92645,-2147
chr3:20087928-20088710	chr3	+	20088076	20088540	True	NM_003884,NR_027694	chr3,chr3	+,-	KAT2B,C3orf48	-6610,-34311
chr4:113215088-113216679	chr4	+	113215399	113215822	True	NM_001102406,NM_052864,NM_025144	chr4,chr4,chr4	+,-,+	ALPK1,TIFA,ALPK1	2676,-8340,2676
chr12:10187935-10188429	chr12	+	10188112	10188203	True	NM_016509,NM_207345	chr12,chr12	-,+	CLEC1B,CLEC9A	-36213,-4898
chr11:117072205-117072487	chr11	+	117072242	117072376	True	NM_003186,NM_001001522,NM_004716	chr11,chr11,chr11	+,+,-	TAGLN,TAGLN,PCSK7	-2253,-2253,30485
chr6:147523221-147523988	chr6	+	147523342	147523989	True	NM_001127715,NM_139244,NR_034115	chr6,chr6,chr6	+,+,-	STXBP5,STXBP5,LOC729178	1518,1518,1811
chr12:8544342-8545152	chr12	+	8544782	8544863	True	NM_001007033,NR_024420	chr12,chr12	+,-	CLEC6A,LOC389634	63727,-1434
chr1:194159114-194159496	chr1	+	194159172	194159476	True	NM_003783,NR_031691	chr1,chr1	-,+	B3GALT2,MIR1278	-1003429,-1053590
chr17:48626559-48626844	chr17	+	48626635	48626825	True	NM_022827,NM_001267	chr17,chr17	+,-	SPATA20,CHAD	-2124,-80408
chr17:4689784-4690089	chr17	+	4689820	4690050	True	NM_002798,NM_001014985,NM_001144939,NM_001144941,NM_001144940,NM_182566	chr17,chr17,chr17,chr17,chr17,chr17	+,+,-,-,-,-	PSMB6,GLTPD2,VMO1,VMO1,VMO1,VMO1	9406,2203,-91,-91,-91,-91
chr3:36936792-36938158	chr3	+	36937145	36938191	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	48407,96649
chr1:38261242-38262444	chr1	+	38261288	38262487	True	NM_001031740,NM_152496,NM_001113482,NM_024640	chr1,chr1,chr1,chr1	+,+,+,-	MANEAL,MANEAL,MANEAL,YRDC	-1571,-185,-1571,11428
chr17:27045880-27046199	chr17	+	27045922	27045991	True	NR_024575,NR_024579,NM_000984,NR_000014,NM_178170,NM_031934,NM_001142624,NR_000013,NR_000009,NR_000010,NM_138463,NM_001142625,NM_152465,NM_001160407,NM_001144943,NM_001144942	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,+,+,-,-,+,+,+,-,-,-,-,-,-	RAB34,RAB34,RPL23A,SNORD42A,NEK8,RAB34,RAB34,SNORD42B,SNORD4B,SNORD4A,TLCD1,RAB34,PROCA1,TLCD1,RAB34,RAB34	-671,-671,1008,4455,9840,-1014,-636,1576,4707,3608,7290,-636,-7050,8009,-636,-1014
chr2:100722256-100723155	chr2	+	100722441	100723107	True	NM_001011717,NM_001025108	chr2,chr2	+,-	NMS,AFF3	363836,-396
chr8:135805973-135807581	chr8	+	135806076	135807529	True	NR_029666,NR_029599,NR_002438	chr8,chr8,chr8	-,-,+	MIR30B,MIR30D,ZFAT-AS1	5371,9709,-195822
chr9:89699084-89699355	chr9	+	89699154	89699404	True	NR_036691,NM_001001709	chr9,chr9	-,+	LOC494127,C9orf170	786,64154
chr16:1428036-1428681	chr16	+	1428279	1428643	True	NM_032520,NM_001193389,NM_023076	chr16,chr16,chr16	+,-,-	GNPTG,UNKL,UNKL	-26430,1091,1091
chr19:4336924-4337387	chr19	+	4336933	4337051	True	NM_001159846,NM_001013841,NM_032868,NM_017720	chr19,chr19,chr19,chr19	+,-,+,-	MPND,STAP2,MPND,STAP2	6472,1846,6472,1846
chr10:121655111-121656585	chr10	+	121655396	121656573	True	NM_024834,NM_007190,NR_037771	chr10,chr10,chr10	-,+,+	MCMBP,SEC23IP,SEC23IP	-23002,-3362,-3362
chr1:116962157-116962594	chr1	+	116962201	116962389	True	NR_024126,NR_024125,NR_024124,NM_001160234,NR_027646,NR_027645	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,-	ATP1A1OS,ATP1A1OS,ATP1A1OS,ATP1A1,ATP1A1OS,ATP1A1OS	-1020,-996,-1004,-36266,-957,-1004
chr4:186124237-186124502	chr4	+	186124370	186124547	True	NM_020827,NM_031953	chr4,chr4	-,+	KIAA1430,SNX25	692,6736
chr16:11945195-11945441	chr16	+	11945197	11945403	True	NM_015659,NM_001192	chr16,chr16	-,+	RSL1D1,TNFRSF17	89,113560
chr8:23263206-23264054	chr8	+	23263434	23263796	True	NM_001136108,NM_002318	chr8,chr8	+,-	R3HCC1,LOXL2	-117873,-1712
chr3:122572574-122573794	chr3	+	122572620	122573638	True	NM_024610,NR_024618	chr3,chr3	-,+	HSPBAP1,LOC100129550	-59970,31721
chr7:143080169-143080394	chr7	+	143080181	143080443	True	NM_001010972,NM_001031690,NM_003461	chr7,chr7,chr7	+,-,+	ZYX,FAM131B,ZYX	-1872,-20341,-1872
chr19:10124307-10125372	chr19	+	10124430	10125147	True	NM_015719,NM_015725	chr19,chr19	-,+	COL5A3,RDH8	-3283,-556
chr3:134370660-134371731	chr3	+	134370692	134371744	True	NM_178554,NM_004441	chr3,chr3	-,+	KY,EPHB1	-828,142354
chr8:9759521-9760756	chr8	+	9759601	9760565	True	NR_024281,NM_001135670,NR_029668	chr8,chr8,chr8	-,+,-	LOC157627,MSRA,MIR124-1	324,151264,467
chrX:48335024-48336387	chrX	+	48335257	48336418	True	NM_012280,NM_033518,NM_177439,NM_177434	chrX,chrX,chrX,chrX	+,-,+,+	FTSJ1,SLC38A5,FTSJ1,FTSJ1	-760,-6613,-760,-39
chr1:60387379-60387921	chr1	+	60387693	60387969	True	NM_000775,NM_015888	chr1,chr1	-,+	CYP2J2,HOOK1	4504,-107211
chr7:77472787-77474135	chr7	+	77472928	77474105	True	NM_001127357,NM_032936,NM_020432,NM_001127359	chr7,chr7,chr7,chr7	+,-,+,+	PHTF2,TMEM60,PHTF2,PHTF2	-3540,-45181,-3540,-3540
chr11:44929874-44930140	chr11	+	44929888	44930011	True	NR_026681,NM_001076787	chr11,chr11	+,-	LOC221122,TP53I11	65441,42648
chrX:54837429-54837900	chrX	+	54837539	54837933	True	NM_177433,NR_002953,NM_201222,NM_014599,NM_198510	chrX,chrX,chrX,chrX,chrX	+,+,+,+,-	MAGED2,SNORA11,MAGED2,MAGED2,ITIH5L	-3419,2869,-2097,-2793,-12866
chr9:111926494-111926837	chr9	+	111926493	111926680	True	NM_014334,NM_017832	chr9,chr9	-,+	C9orf4,C9orf6	2950,-229872
chr11:65819823-65820049	chr11	+	65819825	65820065	True	NM_033036,NM_006842	chr11,chr11	-,+	GAL3ST3,SF3B2	-3174,-60
chr12:124778320-124778625	chr12	+	124778367	124778555	True	NM_001077261,NM_181709	chr12,chr12	-,+	NCOR2,FAM101A	273505,-4708
chr22:40767859-40768221	chr22	+	40767991	40768119	True	NM_020831,NM_015705	chr22,chr22	-,+	MKL1,SGSM3	264621,-1456
chr2:108622120-108623557	chr2	+	108622324	108623596	True	NR_024439,NM_021815	chr2,chr2	-,+	LOC729121,SLC5A7	-179741,-19397
chr16:85337535-85337817	chr16	+	85337541	85337835	True	NR_033984,NM_198491	chr16,chr16	+,-	LOC400548,FAM92B	-166836,-191427
chr17:66243331-66243582	chr17	+	66243510	66243584	True	NM_001033571,NM_001033570,NM_001033572,NM_001033574,NM_001174166,NM_016627,NM_001033569	chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,-,+,+	AMZ2,AMZ2,AMZ2,AMZ2,SLC16A6,AMZ2,AMZ2	560,560,560,560,43871,560,560
chr4:6714255-6714707	chr4	+	6714553	6714617	True	NM_203462,NM_018366	chr4,chr4	-,+	MRFAP1L1,CNO	-2947,3224
chr10:11572023-11573443	chr10	+	11572253	11573146	True	NM_001080491,NM_024693	chr10,chr10	-,+	USP6NL,ECHDC3	1185,211209
chr1:147370940-147371178	chr1	+	147371012	147371196	True	NR_003377,NM_005267	chr1,chr1	-,+	PDZK1P1,GJA8	113185,3749
chr19:2867552-2867896	chr19	+	2867582	2867882	True	NM_021217,NM_024967	chr19,chr19	-,+	ZNF77,ZNF556	77137,-300
chr6:42983510-42984893	chr6	+	42983607	42984625	True	NM_057161,NM_033112,NM_014623	chr6,chr6,chr6	+,+,-	KLHDC3,RRP36,MEA1	-1681,4759,-1989
chr1:18079364-18080090	chr1	+	18079398	18080118	True	NM_018715,NM_030812	chr1,chr1	-,+	RCC2,ACTL8	-313178,1689
chrY:21239806-21240957	chrY	+	21239847	21240959	True	NR_002159,NR_001543	chrY,chrY	+,-	TTTY9B,TTTY14	-348130,-545
chr10:1102952-1103212	chr10	+	1103087	1103207	True	NM_004508,NM_014023	chr10,chr10	-,+	IDI1,WDR37	-8026,-362
chr12:7171656-7172503	chr12	+	7171676	7172516	True	NM_001734,NM_201442,NM_005768	chr12,chr12,chr12	+,+,-	C1S,C1S,LPCAT3	-3747,-3747,-45834
chr16:50125300-50126171	chr16	+	50125415	50126219	True	NM_182922,NM_015069	chr16,chr16	+,-	HEATR3,ZNF423	-25595,-264497
chr1:171624808-171625170	chr1	+	171624833	171625138	True	NM_001007239,NM_000261	chr1,chr1	+,-	METTL13,MYOC	125622,-3060
chr17:30266842-30267951	chr17	+	30266891	30267695	True	NM_018428,NM_015355	chr17,chr17	-,+	UTP6,SUZ12	-38162,-2910
chr17:30266842-30267951	chr17	+	29062048	29062108	False	NM_015986,NR_024187	chr17,chr17	-,+	CRLF3,SUZ12P	89730,-25483
chr2:176983978-176985172	chr2	+	176984029	176984987	True	NM_002148,NM_019558,NM_014213,NM_001080458,NM_001199747,NM_001199746	chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,-,+,+	HOXD10,HOXD8,HOXD9,EVX2,HOXD8,HOXD8	-2588,9480,2425,-35339,9434,9480
chr4:39463606-39464071	chr4	+	39463625	39463954	True	NM_001024921,NM_194451,NM_000661,NM_006859	chr4,chr4,chr4,chr4	-,+,-,+	RPL9,LIAS,RPL9,LIAS	-3418,-3020,-3057,-3020
chr17:62501827-62502088	chr17	+	62501837	62502075	True	NM_138363,NM_007215,NM_004396	chr17,chr17,chr17	+,-,-	CCDC45,POLG2,DDX5	1082,-8653,459
chr4:39143224-39143906	chr4	+	39143424	39143725	True	NM_025132,NM_024943	chr4,chr4	+,-	WDR19,TMEM156	40298,-109383
chr11:2722117-2722438	chr11	+	2722218	2722426	True	NR_024627,NR_002728	chr11,chr11	+,-	KCNQ1DN,KCNQ1OT1	168836,-990
chr2:26985906-26986493	chr2	+	26986094	26986412	True	NM_017877,NM_001029881	chr2,chr2	+,-	C2orf18,CIB4	729,-121883
chr9:42858930-42859901	chr9	+	42858930	42859736	True	NR_026759,NR_026558	chr9,chr9	-,+	FAM95B1,AQP7P3	173626,-829
chr9:42858930-42859901	chr9	-	33400973	33401023	False	NM_001170,NM_002504	chr9,chr9	-,+	AQP7,NFX1	1544,-110606
chr9:42858930-42859901	chr9	-	69649611	69650383	False	NM_001085457,NR_024443	chr9,chr9	-,+	CBWD6,LOC100133920	-387018,977
chr9:42858930-42859901	chr9	-	67287670	67288442	False	NM_032250,NR_002817	chr9,chr9	+,-	ANKRD20A1,AQP7P1	638318,1100
chr9:42858930-42859901	chr9	+	67031951	67032723	False	NR_024443,NR_024496	chr9,chr9	-,+	LOC100133920,LOC442421	-969,-537733
chr1:40215213-40215518	chr1	+	40215217	40215429	True	NM_022120,NM_001195007	chr1,chr1	-,+	OXCT2,PPIE	21641,-10751
chr14:53412265-53412753	chr14	+	53412347	53412642	True	NM_001134999,NM_006832,NM_001135000,NM_145251	chr14,chr14,chr14,chr14	-,-,-,+	FERMT2,FERMT2,FERMT2,STYX	5224,5224,5224,-215525
chr16:14727277-14727668	chr16	+	14727287	14727495	True	NM_016561,NM_002582,NM_001134477	chr16,chr16,chr16	+,-,-	BFAR,PARN,PARN	-670,-3163,-3167
chr16:717578-717990	chr16	+	717690	717872	True	NM_001005920,NM_003961,NM_138769	chr16,chr16,chr16	-,+,+	JMJD8,RHBDL1,RHOT2	16617,8202,260
chr4:146568769-146569099	chr4	+	146568825	146568993	True	NM_178835,NM_172250	chr4,chr4	-,+	ZNF827,MMAA	290672,-28336
chr19:46090285-46090986	chr19	+	46090855	46091025	True	NM_003370,NM_001017989,NM_025136	chr19,chr19,chr19	+,-,-	VASP,OPA3,OPA3	-80218,-2733,-2733
chr8:36742792-36743991	chr8	+	36743478	36743998	True	NM_001031836,NR_003671	chr8,chr8	+,-	KCNU1,LOC728024	-101687,861616
chr8:145321979-145322220	chr8	+	145322010	145322092	True	NM_030974,NM_001008271,NM_001080514	chr8,chr8,chr8	-,+,+	SHARPIN,SCXA,SCXB	-162870,-544,-544
chr8:145321979-145322220	chr8	+	145491096	145491178	False	NM_001008271,NM_015201,NM_001080514	chr8,chr8,chr8	+,-,+	SCXA,BOP1,SCXB	-544,23992,-544
chr17:42634434-42634841	chr17	+	42634500	42634626	True	NM_001466,NR_036474	chr17,chr17	+,-	FZD2,GPATCH8	185,-53543
chr8:133577850-133578918	chr8	+	133577849	133578915	True	NR_026684,NM_198513	chr8,chr8	-,+	HPYR1,PHF20L1	-4123,208688
chr9:34329791-34330121	chr9	+	34329845	34330072	True	NM_147173,NM_147172,NM_194313,NM_001161	chr9,chr9,chr9,chr9	+,+,-,+	NUDT2,NUDT2,KIF24,NUDT2	-392,-392,-647,-392
chr17:80708511-80709177	chr17	+	80708516	80709160	True	NM_005993,NM_006822	chr17,chr17	+,-	TBCD,RAB40B	779,-51918
chr3:128967719-128968131	chr3	+	128968011	128968167	True	NM_003418,NM_016128	chr3,chr3	-,+	CNBP,COPG	-65201,285
chr2:209119084-209119632	chr2	+	209119187	209119575	True	NM_005896,NM_001178000	chr2,chr2	-,+	IDH1,PIKFYVE	281,11415
chr17:40978859-40979158	chr17	+	40979029	40979201	True	NM_176863,NM_003766,NM_005789	chr17,chr17,chr17	+,-,+	PSME3,BECN1,PSME3	6221,-2719,6221
chr10:99050391-99051209	chr10	+	99050395	99051014	True	NR_037909,NM_005479,NM_032900,NM_001204300	chr10,chr10,chr10,chr10	-,+,-,-	ARHGAP19-SLIT1,FRAT1,ARHGAP19,ARHGAP19	1469,28007,1469,1469
chr10:79787137-79788554	chr10	+	79787266	79788172	True	NM_001026,NM_007055,NM_001142282,NM_001142283,NM_001142284,NM_033022,NM_001142285	chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,-,+,+,+,+,+	RPS24,POLR3A,RPS24,RPS24,RPS24,RPS24,RPS24	5345,1176,5345,5345,5345,5345,5345
chr19:56265945-56267350	chr19	+	56265964	56267121	True	NM_001145014,NM_176820	chr19,chr19	+,-	RFPL4A,NLRP9	3385,-16196
chr11:61197846-61198587	chr11	+	61197857	61198234	True	NM_001136040,NM_001142565,NM_017841,NM_024811	chr11,chr11,chr11,chr11	-,-,+,-	CPSF7,CPSF7,SDHAF2,CPSF7	-393,-393,-311,-474
chr6:167039289-167039961	chr6	+	167039291	167039960	True	NM_021135,NM_007045	chr6,chr6	-,+	RPS6KA2,FGFR1OP	817,372855
chr14:90042599-90043910	chr14	+	90042714	90043805	True	NM_001085471,NR_024620	chr14,chr14	-,+	FOXN3,PRO1768	41739,-206
chr19:7694705-7695141	chr19	+	7694834	7695130	True	NM_006949,NR_033242,NM_020196,NM_174895,NM_001127396,NM_001171155	chr19,chr19,chr19,chr19,chr19,chr19	+,+,-,-,+,+	STXBP2,LOC100131801,XAB2,PCP2,STXBP2,LOC100131801	6860,-214,-395,3490,6860,-214
chr14:95878886-95879873	chr14	+	95878983	95879911	True	NM_016417,NR_026779	chr14,chr14	+,-	GLRX5,C14orf139	121411,-2556
chr11:60610525-60611860	chr11	+	60610673	60611859	True	NM_004778,NM_024098	chr11,chr11	-,+	GPR44,CCDC86	11635,-1307
chr13:28743077-28743457	chr13	+	28743165	28743301	True	NR_029383,NM_175854	chr13,chr13	-,+	LOC100288730,PAN3	-29854,-30582
chr13:99400868-99402457	chr13	+	99400890	99402340	True	NM_005073,NM_001144072	chr13,chr13	-,+	SLC15A1,UBAC2	2639,450338
chr17:39741521-39742976	chr17	+	39741548	39742440	True	NM_005801,NM_000526	chr17,chr17	+,-	EIF1,KRT14	102686,757
chr5:140028581-140030457	chr5	+	140029578	140030509	True	NR_033697,NM_002488,NM_006083,NM_001185012,NR_037428	chr5,chr5,chr5,chr5,chr5	-,-,+,-,+	NDUFA2,NDUFA2,IK,NDUFA2,MIR3655	-2208,-2208,-2245,-2208,-2200
chr1:28917323-28918524	chr1	+	28917528	28918380	True	NM_152304,NR_024127,NR_003035,NM_001193532	chr1,chr1,chr1,chr1	+,-,-,+	RAB42,SNHG12,SNORA16A,RAB42	331,-9162,-9963,626
chr17:74349088-74349307	chr17	+	74349176	74349284	True	NM_002766,NM_001142601	chr17,chr17	-,+	PRPSAP1,SPHK1	996,31405
chr6:55694002-55695889	chr6	+	55694008	55695858	True	NM_021073,NM_207410	chr6,chr6	-,+	BMP5,GFRAL	44567,-501800
chr6:3903209-3904107	chr6	+	3903257	3903971	True	NM_183373,NM_012135	chr6,chr6	-,+	C6orf145,FAM50B	-151011,-53676
chr19:7746612-7747070	chr19	+	7746784	7746994	True	NM_002002,NM_174894,NM_001042462,NM_001042461,NM_174918	chr19,chr19,chr19,chr19,chr19	-,+,+,+,+	FCER2,TRAPPC5,TRAPPC5,TRAPPC5,C19orf59	20088,-1074,-1128,-1071,-4892
chr19:49893473-49893790	chr19	+	49893477	49893815	True	NM_144688,NM_003598	chr19,chr19	+,-	CCDC155,TEAD2	-2053,-27763
chr4:13626621-13627692	chr4	+	13626651	13627696	True	NM_148894,NR_003132	chr4,chr4	-,+	BOD1L,HSP90AB2P	1682,-291679
chr17:38217424-38218103	chr17	+	38217423	38217953	True	NM_014815,NM_001079518,NM_199334,NM_001190919,NM_001190918,NM_003250	chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,+,+,+	MED24,MED24,THRA,THRA,THRA,THRA	-6534,-6534,1114,492,1114,1114
chr10:26728171-26728512	chr10	+	26728197	26728552	True	NM_001012750,NM_019043	chr10,chr10	-,+	ABI1,APBB1IP	421515,-982
chr18:21578546-21579183	chr18	+	21578644	21579200	True	NM_153211,NM_018030	chr18,chr18	+,-	TTC39C,OSBPL1A	-5969,273046
chr3:125313914-125314145	chr3	+	125313960	125314126	True	NM_022776,NR_024250	chr3,chr3	-,+	OSBPL11,LOC100125556	305,321317
chr16:15191353-15192148	chr16	+	15191525	15192005	True	NM_018427,NM_015027	chr16,chr16	-,+	RRN3,PDXDC1	-3367,-122750
chr16:15191353-15192148	chr16	+	21836124	21836174	False	NM_170664,NR_003370	chr16,chr16	+,-	OTOA,RRN3P1	-119891,-5629
chr6:21665166-21665673	chr6	+	21665345	21665689	True	NR_034143,NR_015410	chr6,chr6	-,+	LOC729177,FLJ22536	481783,985
chr2:98962205-98962892	chr2	+	98962265	98962837	True	NM_001008215,NM_001298,NM_001079878	chr2,chr2,chr2	-,+,+	C2orf64,CNGA3,CNGA3	262168,-40,-40
chr20:11898849-11899205	chr20	+	11898866	11899204	True	NM_000214,NM_014962	chr20,chr20	-,+	JAG1,BTBD3	-1244172,-362
chr8:125739505-125739744	chr8	+	125739538	125739609	True	NM_005005,NM_014751	chr8,chr8	+,-	NDUFB9,MTSS1	-188246,1172
chr18:6837699-6839383	chr18	+	6837714	6839073	True	NR_034100,NM_001010000	chr18,chr18	-,+	LOC400643,ARHGAP28	90852,-3334
chr6:134625644-134626536	chr6	+	134625757	134626220	True	NM_004865,NM_001143676	chr6,chr6	+,-	TBPL1,SGK1	-351508,13039
chr12:51744047-51744883	chr12	+	51744160	51744872	True	NM_001971,NM_004858	chr12,chr12	-,+	CELA1,SLC4A8	-3697,73721
chr2:232790077-232790296	chr2	+	232790136	232790330	True	NM_024409,NM_152383	chr2,chr2	-,+	NPPC,DIS3L2	679,35962
chr15:83027977-83029455	chr15	+	83028883	83029506	True	NR_004847,NR_024474,NM_001164465	chr15,chr15,chr15	+,+,-	UBE2Q2P2,UBE2Q2P3,GOLGA6L10	-5172,-5172,-10685
chr15:83027977-83029455	chr15	-	83177236	83177299	False	NR_026811,NR_033936,NR_033579	chr15,chr15,chr15	-,-,+	LOC80154,LOC727849,LOC440297	5652,5681,-47257
chr15:83027977-83029455	chr15	-	82792659	82792722	False	NR_026811,NR_033936,NR_033579	chr15,chr15,chr15	-,-,+	LOC80154,LOC727849,LOC440297	5651,5680,-39266
chr15:83027977-83029455	chr15	+	82652388	82653010	False	NR_004847,NR_024474,NM_001164465	chr15,chr15,chr15	+,+,-	UBE2Q2P2,UBE2Q2P3,GOLGA6L10	-5164,-5164,-10682
chr22:35874193-35874440	chr22	+	35874272	35874488	True	NM_005368,NM_014310	chr22,chr22	-,+	MB,RASD2	138946,62863
chr7:76608190-76608462	chr7	+	76608194	76608502	True	NR_023383,NM_006682	chr7,chr7	+,-	PMS2P11,FGL2	1636,220698
chr7:76608190-76608462	chr7	+	76110169	76110281	False	NR_003262,NM_001102596	chr7,chr7	-,+	FDPSL2A,DTX2	-5852,-393
chr19:50872454-50872660	chr19	+	50872523	50872693	True	NM_007121,NM_004851	chr19,chr19	+,-	NR1H2,NAPSA	6991,-3592
chr11:67169653-67169970	chr11	+	67169652	67169842	True	NM_198517,NM_002708,NM_001008709,NM_206873	chr11,chr11,chr11,chr11	+,-,-,-	TBC1D10C,PPP1CA,PPP1CA,PPP1CA	1569,-276,-276,-276
chr19:47222709-47223176	chr19	+	47222736	47223162	True	NM_001039885,NM_016457,NM_001079882,NM_001079881,NM_001079880	chr19,chr19,chr19,chr19,chr19	+,-,-,-,-	FKRP,PRKD2,PRKD2,PRKD2,PRKD2	26140,-2352,-5159,-2352,-2352
chr5:179919272-179920147	chr5	+	179919396	179919870	True	NM_052863,NM_015455	chr5,chr5	-,+	SCGB3A1,CNOT6	98667,1546
chr9:107527162-107528060	chr9	+	107527426	107528089	True	NM_018376,NM_001001956,NR_024011	chr9,chr9,chr9	+,-,+	NIPSNAP3B,OR13C9,LOC286367	-1040,-146941,8543
chr5:149544872-149545905	chr5	+	149544877	149545927	True	NM_001804,NM_002609	chr5,chr5	+,-	CDX1,PDGFRB	416,-9455
chr17:1730558-1732049	chr17	+	1730690	1731897	True	NM_052928,NM_002945	chr17,chr17	-,+	SMYD4,RPA1	1339,1375
chr22:39016128-39016529	chr22	+	39016137	39016503	True	NM_001002880,NM_001013647	chr22,chr22	+,-	CBY1,LOC646851	36154,36181
chr19:49178207-49178449	chr19	+	49178258	49178488	True	NM_000511,NM_145807	chr19,chr19	+,-	FUT2,NTN5	20739,-1994
chr1:43856907-43857472	chr1	+	43857013	43857420	True	NM_001012961,NM_201542,NM_052877	chr1,chr1,chr1	+,-,-	C1orf84,MED8,MED8	-1508,-1530,-1530
chr2:941742-943320	chr2	+	941894	943260	True	NM_018968,NR_033880	chr2,chr2	+,-	SNTG2,LOC339822	3293,-77782
chr17:72365543-72365901	chr17	+	72365802	72365950	True	NM_181790,NM_001080466	chr17,chr17	+,-	GPR142,BTBD17	-2208,-7844
chr17:41853409-41854462	chr17	+	41853641	41854297	True	NM_004090,NM_001136483	chr17,chr17	-,+	DUSP3,C17orf105	2121,3505
chr12:3000537-3001106	chr12	+	3000558	3000899	True	NM_202003,NM_001160408,NM_003324	chr12,chr12,chr12	-,+,+	FOXM1,TULP3,TULP3	-14255,-576,-576
chr3:183904492-183906033	chr3	+	183904515	183905751	True	NM_005787,NM_018358	chr3,chr3	-,+	ALG3,ABCF3	61065,-703
chr6:28129094-28129398	chr6	+	28129162	28129426	True	NR_002936,NM_001145129	chr6,chr6	-,+	LOC222699,ZNF389	57331,124
chr22:17600885-17601130	chr22	+	17600950	17601072	True	NM_031890,NM_001163079,NM_014339	chr22,chr22,chr22	-,-,+	CECR6,CECR6,IL17RA	1191,1235,-35150
chr16:14015271-14016550	chr16	+	14015441	14016380	True	NM_005236,NM_001134477	chr16,chr16	+,-	ERCC4,PARN	-1487,707790
chr10:100205828-100206062	chr10	+	100205842	100206100	True	NM_182639,NM_014472,NM_000195	chr10,chr10,chr10	-,+,-	HPS1,C10orf28,HPS1	654,-311520,654
chr14:36990689-36990992	chr14	+	36990747	36990985	True	NM_003317,NM_006194,NM_001101341,NM_001079668	chr14,chr14,chr14,chr14	-,+,-,-	NKX2-1,PAX9,SFTA3,NKX2-1	-1844,135787,-7757,-1317
chr16:8891816-8892907	chr16	+	8892060	8892912	True	NM_000303,NM_015421	chr16,chr16	+,-	PMM2,TMEM186	-441,-555
chr7:6141573-6143021	chr7	+	6141648	6142883	True	NM_032172,NM_014413	chr7,chr7	+,-	USP42,EIF2AK1	1666,-42788
chr8:104945774-104947016	chr8	+	104945793	104946828	True	NM_014677,NM_030780	chr8,chr8	+,-	RIMS2,SLC25A32	-114438,-518325
chrX:40033673-40034472	chrX	+	40033818	40034388	True	NM_001123384,NM_005765,NM_001123383	chrX,chrX,chrX	-,+,-	BCOR,ATP6AP2,BCOR	2244,405827,2244
chr13:31040677-31042550	chr13	+	31040695	31042007	True	NM_005800,NM_002128	chr13,chr13	+,-	USPL1,HMGB1	149822,-614
chrX:134557489-134558512	chrX	+	134557764	134558326	True	NR_024359,NM_007131	chrX,chrX	+,-	NCRNA00086,ZNF75D	-1947,-127799
chr13:19755350-19755556	chr13	+	19755436	19755592	True	NM_006001,NR_034026	chr13,chr13	-,+	TUBA3C,LOC100287114	450,163596
chr6:34396456-34397625	chr6	+	34396544	34397545	True	NM_001203245,NM_001204091,NM_020804,NM_001202470,NM_001014	chr6,chr6,chr6,chr6,chr6	-,-,+,-,-	RPS10,RPS10,PACSIN1,RPS10-NUDT3,RPS10	-2726,-2642,36307,-2642,-2642
chr12:42873611-42874065	chr12	+	42873788	42874082	True	NM_016488,NM_001144881,NM_001144882,NM_001144883	chr12,chr12,chr12,chr12	+,-,-,-	PPHLN1,PRICKLE1,PRICKLE1,PRICKLE1	-153899,3386,3767,3767
chr7:150866513-150867991	chr7	+	150866565	150867908	True	NM_001098834,NM_019015	chr7,chr7	-,+	GBX1,CHPF2	-1698,61676
chr8:9006935-9007865	chr8	+	9007042	9007658	True	NM_153332,NM_024607,NM_001201329	chr8,chr8,chr8	+,-,-	ERI1,PPP1R3B,PPP1R3B	-146779,612,1544
chr2:204099984-204100471	chr2	+	204100166	204100299	True	NM_213589,NM_177538	chr2,chr2	-,+	RAPH1,CYP20A1	299809,2864
chr8:22460752-22461394	chr8	+	22460954	22461258	True	NM_001013842,NM_173686,NR_027715,NM_021174,NR_033902,NM_001198827	chr8,chr8,chr8,chr8,chr8,chr8	+,+,-,+,+,+	C8orf58,C8orf58,FLJ14107,KIAA1967,KIAA1967,C8orf58	-3891,-3891,38516,1280,886,-3891
chr4:54906789-54908249	chr4	+	54907389	54908288	True	NM_133267,NM_012110	chr4,chr4	+,-	GSX2,CHIC2	57959,22550
chr17:43923626-43925167	chr17_ctg5_hap1	-	942620	943535	False	NM_175882,NR_024559	chr17_ctg5_hap1,chr17_ctg5_hap1	-,+	IMP5,LOC100128977	1799,-47977
chr17:43923626-43925167	chr17	+	43923642	43924919	True	NM_175882,NR_024559	chr17,chr17	+,-	IMP5,LOC100128977	-1437,48010
chr10:32332090-32333319	chr10	+	32332297	32333060	True	NM_004521,NM_001026383	chr10,chr10	-,+	KIF5B,CCDC7	12362,401980
chr16:187844-188095	chr16	+	187922	188069	True	NM_001039476,NM_001077350,NM_005332	chr16,chr16,chr16	-,-,+	NPRL3,NPRL3,HBZ	591,653,14784
chr20:23330911-23331231	chr20	+	23330996	23331280	True	NM_013248,NM_022080	chr20,chr20	+,-	NXT1,NAPB	92,70926
chr6:49590087-49590594	chr6	+	49590259	49590516	True	NM_001145652,NM_000324	chr6,chr6	+,-	C6orf141,RHAG	-72197,14128
chr8:144638404-144638870	chr8	+	144638734	144638892	True	NM_024736,NM_015117,NM_001166237	chr8,chr8,chr8	+,-,+	GSDMD,ZC3H3,GSDMD	1584,-15114,-3228
chr2:91751458-91751914	chr2	+	91751457	91751611	True	NR_003503,NR_027238	chr2,chr2	+,-	GGT8P,LOC654342	211756,96414
chr2:91751458-91751914	chr2	-	87575288	87575345	False	NR_026846,NR_024204	chr2,chr2	-,+	LOC285074,NCRNA00152	-271752,179628
chr2:91751458-91751914	chr2	+	90528641	90528698	False	NR_003503,NR_027238	chr2,chr2	+,-	GGT8P,LOC654342	1434669,1319328
chr2:91751458-91751914	chr2	-	90283377	90283434	False	NM_004836,NR_015424	chr2,chr2	-,+	EIF2AK3,ANKRD36BP2	-1356283,-1218010
chr20:35919155-35920795	chr20	+	35919396	35920542	True	NM_022077,NM_021081,NM_001003897	chr20,chr20,chr20	+,-,+	MANBAL,GHRH,MANBAL	-1396,-34097,-1396
chr14:24811287-24811891	chr14	+	24811684	24811910	True	NM_001136022,NM_139247,NM_006871,NM_001198568,NM_001198592	chr14,chr14,chr14,chr14,chr14	+,-,-,-,-	NFATC4,ADCY4,RIPK3,ADCY4,ADCY4	24234,-7407,-2442,-7407,-7407
chr16:29936197-29937037	chr16	+	29936334	29936870	True	NM_178863,NM_181718	chr16,chr16	-,+	KCTD13,ASPHD1	725,-24245
chr2:8116959-8118412	chr2	+	8117146	8118415	True	NM_002166,NR_015405	chr2,chr2	+,-	ID2,LOC339788	703697,-201
chr1:149261750-149262740	chr1	+	149261841	149262699	True	NM_001024599,NR_027002	chr1,chr1	-,+	HIST2H2BF,LOC388692	136580,16776
chr1:149261750-149262740	chr1	+	149647725	149648301	False	NM_001161334,NR_024510	chr1,chr1	-,+	HIST2H2BF,LOC728855	135677,-71330
chr17:45724844-45725417	chr17	+	45724905	45725280	True	NM_002265,NR_033934	chr17,chr17	+,-	KPNB1,MRPL45P2	1994,-154919
chr9:136039752-136040258	chr9	+	136039753	136040302	True	NM_021996,NR_001275	chr9,chr9	-,+	GBGT1,CELP	-452,-81878
chr1:19534677-19536192	chr1	+	19534982	19536092	True	NM_020765,NM_016183	chr1,chr1	-,+	UBR4,MRTO4	712,41982
chr14:20936688-20937015	chr14	+	20936857	20936969	True	NM_144568,NM_000270,NM_001100814	chr14,chr14,chr14	-,+,-	TMEM55B,PNP,TMEM55B	-7220,568,-7220
chr12:54756710-54757107	chr12	+	54756725	54757083	True	NR_029894,NM_020370	chr12,chr12	+,-	MIR148B,GPR84	-25776,1237
chr22:20002482-20002936	chr22	+	20002572	20002940	True	NM_152906,NM_001670	chr22,chr22	+,-	C22orf25,ARVCF	5690,1419
chr16:611504-612018	chr16	+	611891	612017	True	NM_176677,NM_148920,NM_145270,NR_024121,NM_004204	chr16,chr16,chr16,chr16,chr16	+,+,+,-,+	NHLRC4,PIGQ,C16orf11,NCRNA00235,PIGQ	5014,7986,-1520,-34484,7986
chr16:30587966-30588995	chr16	+	30588200	30588669	True	NM_001024683,NM_152458,NM_145271,NM_024031	chr16,chr16,chr16,chr16	-,-,-,+	ZNF688,ZNF785,ZNF688,PRR14	-4472,8484,-4472,73571
chr13:21510649-21511943	chr13	+	21510765	21511778	True	NM_022459,NM_005870	chr13,chr13	-,+	XPO4,SAP18	-33852,202874
chr3:148415903-148416284	chr3	+	148415966	148416332	True	NM_000685,NM_031850,NM_009585,NM_003071,NM_004835	chr3,chr3,chr3,chr3,chr3	+,+,+,-,+	AGTR1,AGTR1,AGTR1,HLTF,AGTR1	-359,-359,-359,388059,-359
chr5:149787787-149788708	chr5	+	149787995	149788451	True	NM_004355,NM_001025158,NM_001025159,NM_001195141	chr5,chr5,chr5,chr5	-,-,-,+	CD74,CD74,CD74,TCOF1	3922,3931,3922,-50846
chr6:34758547-34758967	chr6	+	34758719	34759000	True	NM_017754,NM_024294	chr6,chr6	+,-	UHRF1BP1,C6orf106	793,-94094
chr9:24749-25017	chr12	-	78853	78903	False	NR_028269,NR_026823	chr12,chr12	+,-	LOC100288778,FAM138D	9080,70559
chr9:24749-25017	chr19	+	66381	66539	False	NM_001005240,NR_033266	chr19,chr19	+,-	OR4F17,WASH5P	44139,4477
chr9:24749-25017	chr15	-	102506340	102506390	True	NR_034090	chr15	-	DDX11L9	12956
chr9:86984046-86984745	chr9	+	86984136	86984488	True	NM_022127,NM_001018064	chr9,chr9	-,+	SLC28A3,NTRK2	-723,298977
chr5:98104966-98105364	chr5	+	98105081	98105361	True	NM_001012761,NR_033932	chr5,chr5	+,-	RGMB,FLJ35946	-133,3477
chr2:103236958-103237349	chr2	+	103236957	103237247	True	NM_003048,NM_032718	chr2,chr2	+,-	SLC9A2,MFSD9	-842,116140
chr1:193097212-193097514	chr1	+	193097217	193097360	True	NM_024529,NM_016066,NR_031691	chr1,chr1,chr1	+,-,+	CDC73,GLRX2,MIR1278	-6188,-21973,8272
chr9:5671525-5672068	chr9	+	5671617	5672044	True	NM_024896,NM_020829	chr9,chr9	-,+	ERMP1,KIAA1432	161087,-15090
chr19:48673958-48674519	chr19	+	48674155	48674547	True	NM_000234,NM_153608	chr19,chr19	-,+	LIG1,ZNF114	-595,100106
chr2:131099358-131099596	chr2	+	131099460	131099574	True	NM_033416,NM_032357	chr2,chr2	+,-	IMP4,CCDC115	914,398
chr11:6936565-6938192	chr11	+	6936723	6937671	True	NM_003700,NM_013250,NM_001004684	chr11,chr11,chr11	-,+,+	OR2D2,ZNF215,OR2D3	-22992,9982,4561
chr8:22500703-22501341	chr8	+	22500706	22501390	True	NR_027715,NM_021174	chr8,chr8	-,+	FLJ14107,KIAA1967	-984,-38218
chr11:74867385-74867984	chr11	+	74867411	74867983	True	NM_001005285,NM_001145212,NM_007256,NM_001145211	chr11,chr11,chr11,chr11	-,+,+,+	OR2AT4,SLCO2B1,SLCO2B1,SLCO2B1	-66653,-5430,-5430,2860
chr18:74468880-74469842	chr18	+	74469111	74469829	True	NM_007345,NM_001025081	chr18,chr18	+,-	ZNF236,MBP	66286,259276
chr18:501142-501393	chr18	+	501145	501401	True	NM_130386,NM_004066	chr18,chr18	-,+	COLEC12,CETN1	-416,78967
chr5:87973891-87974172	chr5	+	87973924	87974142	True	NR_024383,NR_015436,NM_022650,NR_024384	chr5,chr5,chr5,chr5	-,-,+,-	LOC645323,LOC645323,RASA1,LOC645323	170,6528,-1409209,-4778
chr11:2464582-2465026	chr11	+	2464640	2464952	True	NM_000218,NM_014555	chr11,chr11	+,-	KCNQ1,TRPM5	1268,-20365
chr1:111146837-111147387	chr1	+	111146863	111147301	True	NM_004974,NR_003599	chr1,chr1	-,+	KCNA2,CYMP	1724,-123533
chr17:21159730-21160641	chr17	+	21160007	21160550	True	NM_152914,NM_145109	chr17,chr17	-,+	C17orf103,MAP2K3	-3429,27417
chr16:211063-211903	chr16	+	211074	211708	True	NM_001077350,NM_001003938,NM_005332	chr16,chr16,chr16	-,+,+	NPRL3,HBM,HBZ	-22402,4264,-8271
chr5:159653422-159655118	chr5	+	159653594	159654920	True	NM_001445,NM_024565	chr5,chr5	+,-	FABP6,CCNJL	1516,84703
chrX:51637532-51637881	chrX	+	51637531	51637597	True	NM_001005333,NR_003711,NM_006986	chrX,chrX,chrX	+,-,+	MAGED1,SNORA11D,MAGED1	-884,169022,-884
chr3:46743197-46743718	chr3	+	46743267	46743765	True	NM_001190707,NM_147196,NR_033815,NM_147129	chr3,chr3,chr3,chr3	-,+,-,-	ALS2CL,TMIE,ALS2CL,ALS2CL	-8121,-495,-8073,-8073
chr3:112931431-112932607	chr3	+	112931637	112932584	True	NR_027796,NM_033254	chr3,chr3	-,+	C3orf17,BOC	-193082,-313
chr15:75627295-75628124	chr15	+	75627551	75628123	True	NR_030360,NM_017828	chr15,chr15	-,+	MIR631,COMMD4	17953,250
chr2:74670535-74670854	chr2	+	74670682	74670898	True	NM_033046,NM_001015056,NM_031288,NM_001015055	chr2,chr2,chr2,chr2	-,-,+,-	RTKN,RTKN,INO80B,RTKN	-2972,-2972,11251,-1622
chr4:7070463-7070709	chr4	+	7070466	7070668	True	NM_152293,NM_025196	chr4,chr4	+,-	TADA2B,GRPEL1	-25361,-666
chr10:81680305-81680617	chr10	+	81680310	81680610	True	NR_002724,NM_003019	chr10,chr10	+,-	MBL1P,SFTPD	-427,28301
chr6:22567558-22567946	chr6	+	22567601	22567988	True	NM_001163558,NM_138574	chr6,chr6	-,+	PRL,HDGFL1	-264519,1689
chr11:74870757-74872697	chr11	+	74870803	74872555	True	NM_001005285,NM_001145212,NM_007256,NM_001145211	chr11,chr11,chr11,chr11	-,+,+,+	OR2AT4,SLCO2B1,SLCO2B1,SLCO2B1	-70045,-8822,-8822,-10
chrX:69351119-69353114	chrX	+	69351218	69353003	True	NM_001002254,NM_001551	chrX,chrX	-,+	AWAT2,IGBP1	-81430,314
chr12:2921012-2921755	chr12	+	2921028	2921589	True	NM_018463,NM_031474	chr12,chr12	+,-	ITFG2,NRIP2	197,22683
chr17:19619874-19620261	chr17	+	19619883	19620307	True	NM_001099646,NM_000382,NM_152908	chr17,chr17,chr17	-,+,-	SLC47A2,ALDH3A2,SLC47A2	-32,-67870,-32
chr1:109235331-109235688	chr1	+	109235402	109235721	True	NR_037185,NM_018061,NM_144584	chr1,chr1,chr1	+,+,-	PRPF38B,PRPF38B,HENMT1	-518,-521,-31254
chr8:53306297-53307577	chr8	+	53306604	53307602	True	NM_014682,NM_005285	chr8,chr8	-,+	ST18,NPBWR1	14887,544865
chr15:40764443-40764829	chr15	+	40764449	40764827	True	NM_130468,NR_002208	chr15,chr15	+,-	CHST14,MRPL42P5	-1340,59972
chr15:90928646-90930098	chr15	+	90929023	90930080	True	NR_028287,NM_003870	chr15,chr15	-,+	GABARAPL3,IQGAP1	-36344,1392
chr1:36549279-36549557	chr1	+	36549470	36549537	True	NM_017825,NM_005202,NM_014466	chr1,chr1,chr1	+,-,+	ADPRHL2,COL8A2,TEKT2	4915,16368,138
chr5:67542280-67543947	chr5	+	67542772	67543727	True	NM_005582,NM_181523	chr5,chr5	-,+	CD180,PIK3R1	-1050155,-20372
chr12:12932184-12933612	chr12	+	12932394	12933500	True	NM_030817,NM_006143	chr12,chr12	+,-	APOLD1,GPR19	5040,-83273
chr12:56650978-56651275	chr12	+	56651095	56651305	True	NM_173595,NM_144576,NM_001099337	chr12,chr12,chr12	-,+,+	ANKRD52,COQ10A,COQ10A	888,9336,9761
chrX:71349426-71350842	chrX	+	71349494	71350754	True	NM_207422,NM_001024455	chrX,chrX	+,-	FLJ44635,RGAG4	13279,1047
chrX:148668572-148668784	chrX	+	148668749	148668819	True	NM_016153,NM_001164415,NM_005365,NM_001171909,NM_001080790	chrX,chrX,chrX,chrX,chrX	-,-,-,+,-	HSFX1,HSFX2,MAGEA9,CXorf40A,MAGEA9B	8205,8205,340,-42734,347
chrX:148668572-148668784	chrX	-	148863889	148863959	False	NM_016153,NM_001164415,NM_032508,NM_005365,NM_001080790	chrX,chrX,chrX,chrX,chrX	+,+,-,+,+	HSFX1,HSFX2,TMEM185A,MAGEA9,MAGEA9B	-8214,-8214,-150402,-340,-347
chr13:48807939-48808355	chr13	+	48807964	48808346	True	NM_014166,NM_021999	chr13,chr13	-,+	MED4,ITM2B	-138724,-747
chr12:54368499-54368805	chr12	+	54368512	54368741	True	NM_014212,NR_003716	chr12,chr12	+,-	HOXC11,HOTAIR	-1653,-5997
chr10:15000817-15001271	chr10	+	15001009	15001205	True	NM_001080836,NM_001033858,NM_022487,NM_001033857,NM_001033855	chr10,chr10,chr10,chr10,chr10	+,-,-,-,-	MEIG1,DCLRE1C,DCLRE1C,DCLRE1C,DCLRE1C	232,-4915,-4915,-4915,-4915
chr15:40863474-40864092	chr15	+	40863583	40864115	True	NM_052849,NM_001080792,NM_001080791,NM_152260	chr15,chr15,chr15,chr15	-,-,-,+	C15orf57,C15orf57,C15orf57,RPUSD2	-6331,-6331,-6331,-2097
chr17:5370988-5371296	chr17	+	5371019	5371341	True	NM_001199699,NM_020162,NM_024039	chr17,chr17,chr17	-,-,+	DHX33,DHX33,MIS12	1089,1089,18905
chr5:132107353-132107597	chr5	+	132107405	132107581	True	NM_001039780,NM_001098811,NM_001098813,NM_015146,NM_001098812	chr5,chr5,chr5,chr5,chr5	+,-,-,-,-	CCNI2,SEPT8,SEPT8,SEPT8,SEPT8	-24319,5536,6030,5536,5536
chr19:18143746-18144674	chr19	+	18144022	18144357	True	NM_015683,NM_005535	chr19,chr19	+,-	ARRDC2,IL12RB1	-25096,53391
chr11:1707209-1707593	chr11	+	1707221	1707617	True	NR_026642,NM_001012416	chr11,chr11	-,+	FAM99B,KRTAP5-6	-362,10807
chr11:1707209-1707593	chr11	-	1686283	1686563	False	NR_026642,NR_026643	chr11,chr11	-,+	FAM99B,FAM99A	20346,265
chr20:45623220-45623661	chr20	+	45623229	45623521	True	NM_172110,NM_033550	chr20,chr20	+,-	EYA2,TP53RK	-100017,-304953
chr20:45623220-45623661	chr20	-	45625569	45625777	False	NM_172110,NM_033550	chr20,chr20	+,-	EYA2,TP53RK	-102357,-307293
chr14:96816415-96817995	chr14	+	96816523	96817598	True	NM_018036,NM_016472	chr14,chr14	-,+	ATG2B,C14orf129	12138,28423
chr19:3986863-3987384	chr19	+	3986867	3987139	True	NR_002602,NM_015897,NM_001961	chr19,chr19,chr19	-,+,-	SNORD37,PIAS4,EEF2	-4297,20609,-1406
chr16:89686634-89686911	chr16	+	89686774	89686958	True	NM_001083314,NM_001128141,NM_004413	chr16,chr16,chr16	-,+,+	CHMP1A,DPEP1,DPEP1	37221,-7109,41
chr11:2949034-2949534	chr11	+	2949263	2949527	True	NM_002555,NM_003311	chr11,chr11	+,-	SLC22A18,PHLDA2	-25802,1173
chr12:99037931-99038217	chr12	+	99037946	99038082	True	NM_001160,NM_181869,NM_181868,NM_181861,NM_153687,NM_013229,NM_201613,NM_201612	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,+,+,-,+,-,-	APAF1,APAF1,APAF1,APAF1,IKBIP,APAF1,IKBIP,IKBIP	995,995,995,995,557,995,557,557
chr19:55996841-55997056	chr19	+	55996912	55997052	True	NM_024710,NM_001144950,NM_020378,NM_033113,NM_001195267	chr19,chr19,chr19,chr19,chr19	-,+,+,+,+	ISOC2,SSC5D,NAT14,ZNF628,SSC5D	-23863,2817,-406,-9264,2817
chr8:42063226-42064017	chr8	+	42063312	42063978	True	NM_006803,NM_033011,NM_000930	chr8,chr8,chr8	+,-,-	AP3M2,PLAT,PLAT	-52899,1266,1266
chr10:105880901-105881177	chr10	+	105880912	105881204	True	NM_000494,NM_145247,NM_001002759	chr10,chr10,chr10	-,+,+	COL17A1,MEIR5,MEIR5	-35274,611,724
chr3:42129789-42130349	chr3	+	42129849	42130233	True	NM_001042646,NM_017886	chr3,chr3	+,-	TRAK1,ULK4	2512,-126189
chr2:136493484-136495298	chr2	+	136493695	136495042	True	NM_002299,NM_014607	chr2,chr2	-,+	LCT,UBXN4	99758,4146
chr14:29235184-29235638	chr14	+	29235360	29235656	True	NM_002742,NR_026731,NR_026732,NM_005249	chr14,chr14,chr14,chr14	-,+,+,+	PRKD1,C14orf23,C14orf23,FOXG1	1161293,6253,6253,630
chr1:228674421-228674756	chr1	+	228674607	228674783	True	NM_001010858,NM_033445	chr1,chr1	+,-	RNF187,HIST3H2A	284,-29047
chr11:16760202-16760444	chr11	+	16760218	16760442	True	NM_014267,NM_033326	chr11,chr11	+,-	C11orf58,SOX6	-121,-262283
chr7:97840097-97840599	chr7	+	97840175	97840237	True	NM_015395,NM_177455	chr7,chr7	-,+	TECPR1,BHLHA15	41281,1328
chr15:89457630-89458468	chr15	+	89458184	89458264	True	NM_013227,NM_001114614,NM_005928	chr15,chr15,chr15	+,-,-	ACAN,MFGE8,MFGE8	-111561,-1521,-1521
chr8:37382350-37382643	chr8	+	37382355	37382634	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	170666,222980
chr4:4145266-4145588	chr4	+	4145459	4145527	True	NM_145291,NM_177998	chr4,chr4	+,-	ZBTB49,OTOP1	146396,83144
chr14:103242015-103243035	chr14	+	103242083	103243035	True	NM_145726,NM_152326,NM_001199427,NM_003300,NM_145725	chr14,chr14,chr14,chr14,chr14	+,-,+,+,+	TRAF3,ANKRD9,TRAF3,TRAF3,TRAF3	780,-265955,780,780,780
chr8:59459950-59461641	chr8	+	59459956	59461655	True	NM_000780,NM_005625,NM_001007070,NM_001007067,NM_001007068,NM_001007069	chr8,chr8,chr8,chr8,chr8,chr8	-,+,+,+,+,+	CYP7A1,SDCBP,SDCBP,SDCBP,SDCBP,SDCBP	-47236,4072,4072,4072,4072,4072
chr15:27006031-27006464	chr15	+	27006030	27006254	True	NM_000814,NM_000810	chr15,chr15	-,+	GABRB3,GABRA5	12029,105611
chr1:40209629-40211115	chr1	+	40209760	40211106	True	NM_203456,NR_036544,NM_001195007,NR_036543,NM_022120,NM_006112	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,-,+	PPIE,PPIE,PPIE,PPIE,OXCT2,PPIE	-5296,-5296,-5296,-5296,25964,-5296
chr7:91863016-91864435	chr7	+	91863188	91864148	True	NM_019004,NM_004912	chr7,chr7	+,-	ANKIB1,KRIT1	11399,11114
chr2:237077928-237078221	chr2	+	237077928	237078270	True	NM_020311,NM_001485	chr2,chr2	+,-	CXCR7,GBX2	400109,-1276
chr14:32824079-32824569	chr14	+	32824098	32824617	True	NR_027263,NM_004274	chr14,chr14	-,+	C14orf128,AKAP6	-278193,-25670
chr3:93689480-93689820	chr3	+	93689609	93689761	True	NM_144996,NM_000313,NM_182896,NM_001174151,NM_001174150,NR_033427	chr3,chr3,chr3,chr3,chr3,chr3	+,-,+,+,+,+	ARL13B,PROS1,ARL13B,ARL13B,ARL13B,ARL13B	9221,3223,9221,9221,9221,9221
chr2:48858705-48860479	chr2	+	48859235	48860495	True	NM_000233,NM_006872	chr2,chr2	-,+	LHCGR,GTF2A1L	122435,-14349
chr22:19034555-19035100	chr22	+	19034565	19035139	True	NR_024157,NR_026651	chr22,chr22	-,+	DGCR11,DGCR10	799,-24479
chr8:144079379-144080212	chr8	+	144079482	144079979	True	NM_001127213,NR_026913	chr8,chr8	+,-	LY6E,LOC100133669	19922,19878
chr13:98796819-98797049	chr13	+	98796882	98797078	True	NM_178861,NM_001001715,NM_005766	chr13,chr13,chr13	-,+,+	RNF113B,FARP1,FARP1	32493,-1499,-1499
chr2:127957056-127957646	chr2	+	127957059	127957532	True	NM_001001665,NM_000312	chr2,chr2	-,+	CYP27C1,PROC	5861,218463
chr2:133046547-133046893	chr2	+	133046548	133046813	True	NM_001508,NR_027020	chr2,chr2	+,-	GPR39,ANKRD30BL	127333,-31006
chr6:25914589-25915132	chr6	+	25914657	25915110	True	NM_006355,NM_005835	chr6,chr6	+,-	TRIM38,SLC17A2	47960,15887
chr17:32906271-32906533	chr17	+	32906307	32906549	True	NM_207454,NM_207313	chr17,chr17	-,+	C17orf102,TMEM132E	45,1218
chr6:150067561-150069370	chr6	+	150067591	150069040	True	NM_198887,NM_005389	chr6,chr6	-,+	NUP43,PCMT1	-61,1790
chr19:35453945-35454681	chr19	+	35453972	35454490	True	NR_024018,NM_175872	chr19,chr19	+,-	ZNF30,ZNF792	-36216,513
chr10:22726488-22726713	chr10	+	22726488	22726730	True	NM_172242,NR_036533	chr10,chr10	+,-	SPAG6,LOC100499489	-92140,178
chr18:11979860-11980656	chr18	+	11980001	11980467	True	NM_023075,NM_014214	chr18,chr18	-,+	MPPE1,IMPA2	-71360,959
chr9:140034503-140035606	chr9	+	140034509	140035219	True	NM_000832,NM_013379,NM_007327,NM_021569,NM_001185090,NM_001185091	chr9,chr9,chr9,chr9,chr9,chr9	+,-,+,+,+,+	GRIN1,DPP7,GRIN1,GRIN1,GRIN1,GRIN1	-951,-25314,-951,-951,-951,-951
chr1:170636351-170637615	chr1	+	170636483	170637532	True	NM_022716,NM_006902,NR_026957	chr1,chr1,chr1	+,+,-	PRRX1,PRRX1,LOC284688	-3221,-3221,-383134
chr7:44038211-44039415	chr7	+	44038757	44039165	True	NM_175064,NR_003655	chr7,chr7	+,-	SPDYE1,POLR2J4	1323,19633
chr12:107171667-107172032	chr12	+	107171692	107172048	True	NM_001033050,NM_018157	chr12,chr12	-,+	MTERFD3,RIC8B	208931,-3350
chr5:176739303-176739525	chr5	+	176739306	176739486	True	NM_130781,NM_013237,NM_001142935,NM_031300,NM_001031677	chr5,chr5,chr5,chr5,chr5	-,+,-,-,-	RAB24,PRELID1,MXD3,MXD3,RAB24	-8562,-8522,-14,-14,-8562
chr5:173158990-173160610	chr5	+	173159461	173160595	True	NR_027109,NM_138369	chr5,chr5	+,-	LOC285593,BOD1	-152855,-115795
chr19:17569188-17569501	chr19	+	17569324	17569388	True	NM_198580,NM_001190844,NM_138454	chr19,chr19,chr19	+,-,-	SLC27A1,TMEM221,NXNL1	11911,-9948,2391
chr5:37840925-37841151	chr5	+	37840991	37841123	True	NM_152403,NM_000514,NM_001190469,NM_001190468,NM_199231	chr5,chr5,chr5,chr5,chr5	+,-,-,-,-	EGFLAM,GDNF,GDNF,GDNF,GDNF	417409,-1209,-5062,-5062,-5398
chr1:109001214-109001839	chr5	+	85580358	85580415	True	NR_003719,NR_036243	chr5,chr5	+,-	NBPF22P,MIR4280	-2154,830413
chr1:109001214-109001839	chr1	+	109001221	109001853	False	NM_001102592,NM_001143987,NM_001143988	chr1,chr1,chr1	-,+,+	HENMT1,NBPF6,NBPF6	201947,-8368,-8368
chr20:23504495-23505338	chr20	+	23504671	23505303	True	NM_080610,NR_001279	chr20,chr20	-,+	CST9L,CSTT	44135,-4940
chr18:13819748-13821153	chr18	+	13819748	13821074	True	NM_005913,NM_152352	chr18,chr18	+,-	MC5R,C18orf19	4468,-93157
chrX:135740235-135741380	chrX	+	135740284	135741358	True	NM_004840,NM_000074	chrX,chrX	-,+	ARHGEF6,CD40LG	122195,-10007
chr6:36973748-36974587	chr6	+	36973865	36974553	True	NM_173558,NM_014341	chr6,chr6	+,-	FGD2,MTCH1	-493,-19916
chr17:18691371-18691814	chr17	+	18691657	18691823	True	NM_016078,NM_001145045	chr17,chr17	+,-	FAM18B1,ZNF286B	-7129,-106085
chr17:18691371-18691814	chr17	-	15459527	15459982	False	NM_145301,NM_001135036,NR_037924,NM_001204478,NM_001130842	chr17,chr17,chr17,chr17,chr17	-,-,-,-,+	FAM18B2,FAM18B2,FAM18B2-CDRT4,FAM18B2-CDRT4,ZNF286A	7315,7315,7315,7315,142908
chr2:239834032-239834233	chr2	+	239834032	239834234	True	NR_034162,NM_057179	chr2,chr2	-,+	FLJ43879,TWIST2	13781,-77410
chr1:161209345-161210375	chr1	+	161209499	161210253	True	NM_001077470,NM_001077471,NM_001077472,NM_001077473,NM_001077474,NM_001077475,NM_001077476,NM_001077477,NM_001077478,NM_001077479,NM_001077469,NM_001077481,NM_001077480,NM_001077482,NM_032174,NM_005122	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,-,-,-,-,-,-,-,-,-,+,-	NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,NR1I3,TOMM40L,NR1I3	-1499,-1499,-1499,-1499,-1499,-1499,-1499,-1499,-1499,-1499,-1499,-1499,-1499,-1499,-13719,-1499
chr19:2013780-2014105	chr19	+	2013788	2014090	True	NM_001319,NM_017797	chr19,chr19	+,-	CSNK1G2,BTBD2	-72678,1662
chr6:46625054-46626565	chr6	+	46625461	46626286	True	NM_016593,NM_004277,NM_001204052,NM_001204051	chr6,chr6,chr6,chr6	-,+,+,+	CYP39A1,SLC25A27,SLC25A27,SLC25A27	-4938,-4867,-4867,-4867
chrX:118694313-118696079	chrX	+	118694332	118696020	True	NM_001170569,NM_003336,NM_001170570,NM_022101	chrX,chrX,chrX,chrX	-,+,-,-	CXorf56,UBE2A,CXorf56,CXorf56	3402,12478,3427,3427
chr5:61705741-61706443	chr5	+	61705934	61706065	True	NM_014473,NM_016338,NM_001134779	chr5,chr5,chr5	-,+,+	DIMT1L,IPO11,IPO11	-6206,2507,8645
chr12:120704593-120706592	chr12	+	120704683	120706397	True	NM_001080855,NM_002859,NM_012240	chr12,chr12,chr12	-,-,+	PXN,PXN,SIRT4	-1120,-1120,33726
chr10:77562153-77563200	chr10	+	77562152	77563174	True	NM_032772,NM_032024	chr10,chr10	-,+	ZNF503,C10orf11	-400639,-19685
chr7:100824752-100825043	chr7	+	100824845	100824959	True	NM_198571,NM_001283	chr7,chr7	-,+	C7orf52,AP1S1	-1288,-27215
chr5:109974640-109975680	chr5	+	109974718	109975580	True	NM_001039763,NM_138773	chr5,chr5	-,+	TMEM232,SLC25A46	86920,99173
chr10:98741018-98741493	chr10	+	98741036	98741490	True	NM_003061,NM_015652	chr10,chr10	-,+	SLIT1,C10orf12	204243,-46
chr6:12011192-12011539	chr6	+	12011277	12011371	True	NM_032744,NM_002114	chr6,chr6	-,+	C6orf105,HIVEP1	-231997,1352
chr12:127635069-127636204	chr12	+	127635234	127636036	True	NR_033970,NR_015398	chr12,chr12	-,+	LOC440117,LOC100128554	-275998,-708259
chr15:77363532-77364116	chr15	+	77363688	77364142	True	NM_003978,NM_005724,NM_198902,NM_001168412	chr15,chr15,chr15,chr15	+,-,-,-	PSTPIP1,TSPAN3,TSPAN3,TSPAN3	-76274,-118,-118,-118
chr10:24498031-24498279	chr10	+	24498059	24498235	True	NM_019590,NM_001098501,NM_020824	chr10,chr10,chr10	+,+,-	KIAA1217,KIAA1217,ARHGAP21	-390,-390,514412
chr17:49197704-49197931	chr17	+	49197715	49197933	True	NM_001130528,NM_001018136,NM_003971	chr17,chr17,chr17	-,+,-	SPAG9,NME1-NME2,SPAG9	343,32963,343
chr7:143318542-143319278	chr7	+	143318562	143319160	True	NM_178561,NM_001130025,NM_173678	chr7,chr7,chr7	-,+,+	CTAGE6P,FAM115C,FAM115C	135739,-568,-71
chr7:143318542-143319278	chr7	+	143398049	143398349	False	NM_178561,NM_001130026	chr7,chr7	-,+	CTAGE6P,FAM115C	56550,14589
chr7:143318542-143319278	chr7	-	143532685	143533283	False	NR_015421,NM_001004685	chr7,chr7	-,+	LOC154761,OR2F2	577,99042
chr12:85510219-85511123	chr12	+	85510831	85511137	True	NM_001100917,NM_001079910	chr12,chr12	-,+	TSPAN19,LRRIQ1	-80776,-80785
chrX:153623718-153624672	chrX	+	153623824	153624264	True	NM_006013,NM_006730,NR_000011,NR_026898	chrX,chrX,chrX,chrX	+,-,+,+	RPL10,DNASE1L1,SNORA70,RPL10	2306,13361,4357,2306
chrX:153623718-153624672	chrX	-	153564972	153565022	False	NM_001145934,NM_001110556	chrX,chrX	+,-	TKTL1,FLNA	-31614,38034
chr1:28834196-28836044	chr1	+	28834504	28835793	True	NM_001269,NR_002909,NR_030725,NR_030726,NR_036473,NM_001048195,NM_001048194,NM_001048199,NR_003077	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,+,+,+,-	RCC1,SNHG3,RCC1,RCC1,SNHG3,RCC1,RCC1,RCC1,SNORD99	8951,-2100,-2100,-2100,-2100,8951,8951,-2100,69592
chr9:32946448-32946958	chr9	+	32946465	32946987	True	NM_001539,NM_001195249	chr9,chr9	+,-	DNAJA1,APTX	78221,54637
chr9:4998548-4998912	chr9	+	4998550	4998718	True	NM_007179,NM_004972	chr9,chr9	-,+	INSL6,JAK2	186962,-13360
chr1:203196001-203196341	chr1	+	203196041	203196311	True	NM_003465,NM_006763	chr1,chr1	-,+	CHIT1,BTG2	2599,78352
chr3:9791754-9792104	chr3	+	9791813	9792129	True	NM_016826,NM_016827,NM_016820,NM_016821,NM_016828,NM_016829,NM_016819,NM_003656,NM_002542	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,+,+,+,-,+	OGG1,OGG1,OGG1,OGG1,OGG1,OGG1,OGG1,CAMK1,OGG1	-236,-236,-236,-236,-236,-236,-236,19589,-236
chr21:38447739-38449160	chr21	+	38447739	38448958	True	NM_003316,NM_153681,NM_153682,NR_028352,NM_001001894	chr21,chr21,chr21,chr21,chr21	+,-,-,-,+	TTC3,PIGP,PIGP,PIGP,TTC3	6288,-2636,-2281,-2281,-2220
chr5:136833353-136833674	chr5	+	136833431	136833637	True	NM_004598,NR_002713	chr5,chr5	-,+	SPOCK1,NPY6R	1431,303244
chrX:12814430-12816109	chrX	+	12814790	12816059	True	NM_001039091,NR_030727,NM_002765	chrX,chrX,chrX	+,-,+	PRPS2,LOC349408,PRPS2	-5375,145411,-5375
chr12:12418230-12418879	chr12	+	12418472	12418908	True	NM_058169,NM_002336	chr12,chr12	+,-	LOH12CR1,LRP6	91111,953
chr14:50234989-50235351	chr14	+	50235067	50235397	True	NM_001197331,NM_014315	chr14,chr14	-,+	POLE2,KLHDC2	-79969,-331
chr10:15132578-15133047	chr10	+	15132585	15132837	True	NM_183005,NM_001097590,NM_006414,NM_001039844,NM_153244	chr10,chr10,chr10,chr10,chr10	+,+,+,-,-	RPP38,RPP38,RPP38,ACBD7,C10orf111	6344,6344,6344,-1810,6531
chr1:146723274-146724529	chr1	+	146723711	146724443	True	NM_004284,NM_001461	chr1,chr1	+,-	CHD1L,FMO5	-9476,-26481
chr16:71319250-71320627	chr16	+	71319298	71320655	True	NM_001740,NM_001099642,NM_018348	chr16,chr16,chr16	+,-,-	CALB2,FTSJD1,FTSJD1	71960,2711,2905
chr7:44836221-44836436	chr7	+	44836258	44836332	True	NM_138635,NM_021130	chr7,chr7	-,+	H2AFV,PPIA	51443,-68
chr2:46820563-46821765	chr2	+	46820658	46821571	True	NM_002643,NM_014171	chr2,chr2	-,+	PIGF,CRIPT	22731,22753
chr2:11052798-11053089	chr2	+	11052869	11053119	True	NM_005742,NM_002236	chr2,chr2	-,+	PDIA6,KCNF1	-99909,-857
chr8:74661182-74661437	chr8	+	74661281	74661443	True	NM_001164381,NM_001164380,NM_001164383,NM_001164382,NM_001164385,NM_001164384,NM_001040613,NM_014393	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,-,-,+,-	STAU2,STAU2,STAU2,STAU2,STAU2,STAU2,TMEM70,STAU2	-2119,-2119,-2119,-2119,-2119,-1338,226933,-2119
chrX:56762017-56762788	chrX	+	56762052	56762573	True	NR_015367,NR_002308	chrX,chrX	+,-	LOC550643,LOC442454	-6392,1494
chr1:169396774-169397984	chr1	+	169396815	169397672	True	NM_003666,NM_021179	chr1,chr1	+,-	BLZF1,C1orf114	-59672,-145
chr7:1594830-1595038	chr7	+	1594829	1594943	True	NR_021487,NM_001097620	chr7,chr7	+,-	KIAA1908,TMEM184A	14765,1173
chr6:110433908-110434352	chr6	+	110434120	110434412	True	NM_001024934,NM_015891	chr6,chr6	-,+	WASF1,CDC40	66857,67211
chrX:153687550-153688204	chrX	+	153687582	153688086	True	NM_017514,NM_006014	chrX,chrX	+,-	PLXNA3,LAGE3	-1010,19560
chr5:150404225-150405865	chr5	+	150404411	150405895	True	NM_002084,NM_006058	chr5,chr5	+,-	GPX3,TNIP1	-4463,55152
chr19:5341005-5341621	chr19	+	5341155	5341571	True	NM_130854,NM_130855,NM_002850,NM_181710,NM_130853	chr19,chr19,chr19,chr19,chr19	-,-,-,+,-	PTPRS,PTPRS,PTPRS,ZNRF4,PTPRS	-341,-341,-341,113854,-341
chr12:54813832-54815186	chr12	+	54813878	54814964	True	NM_005337,NM_002205	chr12,chr12	+,-	NCKAP1L,ITGA5	76530,-828
chr15:25457655-25457991	chr15	+	25457737	25458007	True	NR_003315,NR_003314,NR_003313,NR_003495,NR_003496,NR_003310,NR_003497,NR_003311,NR_022010,NR_003309,NM_130838,NR_003342,NR_003343,NR_003307,NR_003312	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,+,-,+,+,+,+	SNORD115-23,SNORD115-22,SNORD115-21,SNORD115-24,HBII-52-27,SNORD115-18,HBII-52-28,SNORD115-19,PAR4,SNORD115-17,UBE3A,SNORD115-25,SNORD115-26,SNORD115-15,SNORD115-20	-845,-2723,-6379,798,7642,-8284,9493,-8284,-949,-8284,192696,2680,5756,-6379,-6379
chr1:24153416-24154977	chr1	+	24154211	24154695	True	NM_000191,NM_001166059,NM_007260	chr1,chr1,chr1	-,-,+	HMGCL,HMGCL,LYPLA2	-2262,-2262,-36623
chr14:105286680-105287520	chr14	+	105286794	105287538	True	NR_024396,NM_001014432	chr14,chr14	+,-	MGC23270,AKT1	-1,-24714
chr10:99092501-99092757	chr10	+	99092505	99092775	True	NM_005479,NM_012083	chr10,chr10	+,-	FRAT1,FRAT2	-13534,1733
chr9:136931007-136931251	chr9	+	136931050	136931249	True	NM_007371,NR_015427	chr9,chr9	-,+	BRD3,NCRNA00094	1943,-40540
chr10:31996062-31996292	chr10	+	31996066	31996206	True	NM_001174094,NM_018287	chr10,chr10	+,-	ZEB1,ARHGAP12	-386053,221614
chr3:129798745-129799753	chr3	+	129798906	129799788	True	NM_001136152,NR_024252	chr3,chr3	+,-	ALG1L2,LOC729375	885,30538
chr17:37781539-37782149	chr17	+	37781584	37782184	True	NM_181505,NM_006160,NM_032192	chr17,chr17,chr17	+,-,+	PPP1R1B,NEUROD2,PPP1R1B	2568,-17409,994
chr4:26860420-26860978	chr4	+	26860445	26861018	True	NM_001169118,NM_001169117,NM_000730,NM_020860	chr4,chr4,chr4,chr4	+,+,-,+	STIM2,STIM2,CCKAR,STIM2	1294,1294,-368403,1294
chr1:19813989-19814840	chr1	+	19814144	19814694	True	NM_001032363,NM_004930	chr1,chr1	+,-	C1orf151,CAPZB	108776,-2078
chrY:25287134-25289082	chrY	+	25287227	25287441	True	NM_020364,NM_004081	chrY,chrY	+,-	DAZ3,DAZ1	78139,57848
chrY:25287134-25289082	chrY	-	25425562	25425776	False	NM_020420,NM_020363	chrY,chrY	-,+	DAZ4,DAZ2	-80308,-60009
chrY:25287134-25289082	chrY	+	26920951	26921012	False	NM_020364,NM_001005375	chrY,chrY	-,+	DAZ3,DAZ4	38688,58954
chrY:25287134-25289082	chrY	-	27041390	27041451	False	NM_020420,NM_001005786	chrY,chrY	-,+	DAZ4,DAZ2	-81751,-61462
chr2:70188877-70189109	chr2	+	70188880	70189074	True	NM_152792,NM_002357	chr2,chr2	-,+	ASPRV1,MXD1	373,-46758
chrX:129118972-129119481	chrX	+	129118976	129119405	True	NM_021946,NM_001421	chrX,chrX	+,-	BCORL1,ELF4	19758,125127
chr13:41706692-41707008	chr13	+	41706707	41707057	True	NM_007187,NM_152903	chr13,chr13	+,-	WBP4,KBTBD6	-71061,13
chr9:100175208-100175435	chr9	+	100175207	100175445	True	NR_026847,NM_014290	chr9,chr9	-,+	LOC286359,TDRD7	-16234,-964
chr6:153456190-153456595	chr6	+	153456388	153456612	True	NM_194435,NM_012419	chr6,chr6	+,-	VIP,RGS17	-384513,-3999
chr5:139937130-139937420	chr5	+	139937185	139937451	True	NM_133172,NM_001035235,NM_003732,NM_133174,NM_133173,NM_080670,NM_006051	chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,-,+,-,-,+,-	APBB3,SRA1,EIF4EBP3,APBB3,APBB3,SLC35A4,APBB3	6788,277,-9985,6788,6788,6968,6788
chr20:26086920-26087443	chr20	+	26087084	26087345	True	NR_003678,NR_026713	chr20,chr20	-,+	C20orf191,FAM182A	7387,-51891
chr19:53453386-53453722	chr19	+	53453515	53453665	True	NM_152473,NR_037805	chr19,chr19	+,-	HERV-V1,ZNF321	63678,-7668
chr1:6419622-6419904	chr1	+	6419703	6419953	True	NM_031475,NM_181865,NM_181866	chr1,chr1,chr1	+,-,-	ESPN,ACOT7,ACOT7	64894,861,-699
chr19:21104076-21104788	chr19	+	21104242	21104590	True	NM_003429,NR_034060,NM_145297	chr19,chr19,chr19	+,+,-	ZNF85,ZNF85,ZNF626	1468,1468,-259840
chr12:1929564-1929883	chr12	+	1929641	1929931	True	NM_001039029,NM_001163925,NM_001163926,NM_172364	chr12,chr12,chr12,chr12	+,+,+,-	LRTM2,LRTM2,LRTM2,CACNA2D4	-259,-259,-259,97989
chr11:1605106-1605859	chr11	+	1605240	1605862	True	NM_001005922,NR_021489	chr11,chr11	-,+	KRTAP5-1,LOC338651	701,-11320
chr3:23983628-23984081	chr3	+	23983763	23983920	True	NM_001145425,NM_005126,NM_020345	chr3,chr3,chr3	+,+,-	NR1D2,NR1D2,NKIRAS1	3691,2830,-25226
chr3:98618387-98619525	chr3	+	98618410	98619555	True	NM_006100,NM_080927	chr3,chr3	+,-	ST3GAL6,DCBLD2	-166898,1029
chr6:46656270-46656529	chr6	+	46656306	46656524	True	NM_016593,NM_001010870,NM_001168359	chr6,chr6,chr6	-,+,+	CYP39A1,TDRD6,TDRD6	-35783,-745,-745
chr15:25416554-25416770	chr15	+	25416654	25416724	True	NR_003304,NM_130838,NR_003298,NR_003301,NR_001291,NR_003302,NR_003296,NR_003297,NR_003294,NR_003295	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,-,+,+,+,+,+,+,+,+	SNORD115-12,UBE3A,SNORD115-6,SNORD115-9,SNORD115-1,SNORD115-10,SNORD115-4,SNORD115-5,SNORD115-2,SNORD115-3	7163,233979,8919,7163,-835,7163,5254,7160,1057,3349
chr1:38270000-38270782	chr1	+	38270145	38270643	True	NM_001142726,NM_152496,NM_198446,NM_024640	chr1,chr1,chr1,chr1	+,+,+,-	C1orf122,MANEAL,C1orf122,YRDC	2829,-9036,2829,3272
chr13:113242929-113244448	chr13	+	113242983	113244269	True	NM_207440,NM_006322	chr13,chr13	+,-	C13orf35,TUBGCP3	57088,-502
chr8:12809460-12809707	chr8	+	12809579	12809741	True	NM_020844,NR_015383	chr8,chr8	+,-	KIAA1456,LOC340357	-6447,-140669
chr11:71497647-71497894	chr11	+	71497658	71497730	True	NM_018172,NM_152563,NR_029192,NM_001099653	chr11,chr11,chr11,chr11	+,+,-,+	FAM86C,FAM86C,LOC100133315,FAM86C	826,826,141813,826
chr10:13544861-13546362	chr10	+	13544970	13546319	True	NM_003675,NM_152751,NM_001100912	chr10,chr10,chr10	+,-,-	PRPF18,BEND7,BEND7	82619,6,6
chr17:8127895-8128469	chr17	+	8127994	8128518	True	NR_026951,NM_012393	chr17,chr17	-,+	C17orf44,PFAS	-633,24077
chr4:1871165-1871708	chr4	+	1871651	1871721	True	NM_012318,NM_001042424	chr4,chr4	-,+	LETM1,WHSC1	-13677,1401
chr14:25107877-25108559	chr14	+	25108086	25108598	True	NM_015299,NM_004131	chr14,chr14	+,-	KHNYN,GZMB	-209008,-4654
chr5:74807594-74807872	chr5	+	74807706	74807916	True	NM_005713,NM_031361,NM_016218,NM_001130105	chr5,chr5,chr5,chr5	-,-,+,-	COL4A3BP,COL4A3BP,POLK,COL4A3BP	-252,-252,-100,-24
chr15:73977934-73979711	chr15	+	73978152	73979280	True	NM_025240,NM_001024736,NM_017455	chr15,chr15,chr15	+,+,-	CD276,CD276,NPTN	-1581,-1581,-52399
chr19:51873423-51874408	chr19	+	51873508	51874406	True	NM_001985,NM_152353,NR_033235,NM_005601	chr19,chr19,chr19,chr19	-,-,+,-	ETFB,CLDND2,LOC100129083,NKG7	-3836,-1251,44753,1604
chr13:79232230-79232891	chr13	+	79232303	79232793	True	NM_024546,NM_001161407	chr13,chr13	-,+	RNF219,NDFIP2	571,822465
chr12:121154735-121155353	chr12	+	121154735	121155063	True	NM_001080533,NM_000017,NM_198202	chr12,chr12,chr12	+,+,-	UNC119B,ACADS,POP5	-6955,8507,-135534
chr5:131396445-131398402	chr5	+	131396472	131398419	True	NM_000588,NM_001205250	chr5,chr5	+,-	IL3,ACSL6	-183,-48711
chr1:13614213-13615216	chr1	+	13614213	13615245	True	NM_001012277,NM_001012276,NM_001098376	chr1,chr1,chr1	-,-,+	PRAMEF7,PRAMEF8,PRAMEF15	-3726,-2663,26727
chr1:13614213-13615216	chr1	-	12972755	12973787	False	NM_001012277,NM_001012276,NM_001039361	chr1,chr1,chr1	+,+,-	PRAMEF7,PRAMEF8,PRAMEF10	3725,2662,-14661
chr1:13614213-13615216	chr1	+	13393416	13394448	False	NM_001012276,NM_001098376	chr1,chr1	-,+	PRAMEF8,PRAMEF15	-2651,26727
chr15:81666376-81666669	chr15	+	81666377	81666707	True	NM_001080532,NM_004513	chr15,chr15	-,+	TMC3,IL16	21,-77174
chr15:35044906-35045462	chr15	+	35044941	35045429	True	NM_175741,NM_020660	chr15,chr15	+,-	C15orf55,GJD2	-406926,1310
chr6:34206670-34207431	chr6	+	34206816	34207453	True	NM_001008704,NM_002131,NM_145899,NM_178508,NM_001008703,NM_145902,NM_145903,NM_145901,NM_145905	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,+,+,-,-,+,+,+,+	C6orf1,HMGA1,HMGA1,C6orf1,C6orf1,HMGA1,HMGA1,HMGA1,HMGA1	9501,-2290,-2290,9501,9501,-2217,-2290,-2217,-299
chr9:137031692-137032426	chr9	+	137031775	137032313	True	NR_023344,NM_052821	chr9,chr9	-,+	RNU6ATAC,WDR5	-2089,-26912
chr12:120630693-120631265	chr12	+	120631012	120631116	True	NM_053275,NM_012240,NM_001002,NM_006836	chr12,chr12,chr12,chr12	-,+,-,-	RPLP0,SIRT4,RPLP0,GCN1L1	7958,109007,7958,1457
chr15:44829007-44829301	chr15	+	44829014	44829349	True	NR_034171,NR_034170,NM_003758	chr15,chr15,chr15	-,-,+	LOC645212,LOC645212,EIF3J	46,69,-54
chr12:59314435-59315093	chr12	+	59314569	59315097	True	NM_004731,NM_153377,NM_001136051	chr12,chr12,chr12	+,-,-	SLC16A7,LRIG3,LRIG3	768028,-307,-1242
chr20:39969534-39970471	chr20	+	39969548	39970326	True	NM_052846,NM_022896	chr20,chr20	-,+	EMILIN3,LPIN3	25222,-39
chr17:65990815-65991736	chr17	+	65990853	65991715	True	NM_002266,NM_181656,NM_181655	chr17,chr17,chr17	+,-,-	KPNA2,C17orf58,C17orf58	40132,-1088,-1088
chr17:66094902-66095385	chr17	+	66094992	66095251	True	NM_181656,NR_027418	chr17,chr17	-,+	C17orf58,LOC100499466	-105227,2444
chrX:153534138-153534378	chrX	+	153534157	153534366	True	NM_001205201,NM_001145934	chrX,chrX	-,+	TEX28,TKTL1	-10593,-799
chr7:140868492-140870233	chr7	+	140869372	140870267	True	NM_053035,NM_001195278	chr7,chr7	-,+	MRPS33,LOC100131199	-154591,-95391
chr3:72497997-72498616	chr3	+	72498000	72498425	True	NM_001080393,NM_012234	chr3,chr3	+,-	GXYLT2,RYBP	438959,-2226
chr7:73083580-73083843	chr7	+	73083634	73083892	True	NM_001077621,NM_032317	chr7,chr7	+,-	VPS37D,DNAJC30	-1511,13939
chr12:69978245-69979132	chr12	+	69978387	69979075	True	NM_001198842,NR_037475,NM_006431,NR_037476	chr12,chr12,chr12,chr12	+,-,+,+	CCT2,MIR3913-1,CCT2,MIR3913-2	386,-108,132,63
chr11:73092044-73093441	chr11	+	73092189	73093445	True	NM_152222,NM_032871,NM_015159	chr11,chr11,chr11	+,+,-	RELT,RELT,FAM168A	-4835,-4527,215833
chrX:23760085-23760939	chrX	+	23760142	23760829	True	NM_001037171,NM_002970,NM_001033583	chrX,chrX,chrX	-,+,-	ACOT9,SAT1,ACOT9	636,40445,636
chr13:84454825-84455087	chr13	+	84454832	84455086	True	NM_015567,NM_052910	chr13,chr13	+,-	SLITRK5,SLITRK1	3869783,1492
chr1:182360286-182360495	chr1	+	182360292	182360372	True	NR_034131,NM_001033044,NM_002065,NM_001033056,NM_172000	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	NCRNA00272,GLUL,GLUL,GLUL,TEDDM1	16383,1019,1019,217,9429
chr9:35071419-35071755	chr9	+	35071477	35071720	True	NM_007126,NM_203299,NM_004629	chr9,chr9,chr9	-,+,-	VCP,C9orf131,FANCG	1069,-29305,8343
chr9:215332-216818	chr9	+	215363	216721	True	NM_203447,NM_152569	chr9,chr9	+,-	DOCK8,C9orf66	-549,-27
chrX:70341629-70342116	chrX	+	70341654	70342145	True	NM_000206,NM_005120	chrX,chrX	-,+	IL2RG,MED12	-10173,-3299
chr8:66578935-66579225	chr8	+	66578983	66579192	True	NM_018120,NM_001145838	chr8,chr8	-,+	ARMC1,MTFR1	-32531,2915
chr17:76219644-76219904	chr17	+	76219666	76219936	True	NR_002219,NM_001168,NM_001012271,NM_001012270,NM_001204210,NM_001204211,NM_001204212	chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,+,+,+,+,+	EPR1,BIRC5,BIRC5,BIRC5,TMEM235,TMEM235,TMEM235	897,-9440,-9440,-9440,7454,7454,7454
chr22:50915381-50915921	chr22	+	50915416	50915901	True	NM_024866,NM_017584,NM_002972	chr22,chr22,chr22	+,+,-	ADM2,MIOX,SBF1	4110,9311,-1952
chr2:197638004-197638679	chr2	+	197638022	197638209	True	NM_001080539,NM_012086	chr2,chr2	+,-	CCDC150,GTF3C3	-133717,26277
chr19:1038945-1039242	chr19	+	1038991	1039239	True	NM_033420,NM_019112	chr19,chr19	-,+	C19orf6,ABCA7	-17850,862
chr9:67285905-67287507	chr9	+	67286005	67287245	True	NM_032250,NR_002817	chr9,chr9	+,-	ANKRD20A1,AQP7P1	639515,2297
chr9:67285905-67287507	chr9	-	42859784	42860951	False	NR_026759,NR_026558	chr9,chr9	-,+	FAM95B1,AQP7P3	172411,-2062
chr9:67285905-67287507	chr9	+	69648398	69649195	False	NM_001085457,NR_024443	chr9,chr9	-,+	CBWD6,LOC100133920	-385805,2165
chr9:67285905-67287507	chr9	-	67032771	67033951	False	NR_024443,NR_024496	chr9,chr9	-,+	LOC100133920,LOC442421	-1789,-538945
chr11:67084313-67084642	chr11	+	67084609	67084689	True	NM_021173,NR_024469	chr11,chr11	-,+	POLD4,LOC100130987	36413,620
chr8:6419493-6419970	chr8	+	6419559	6419876	True	NM_001118888,NM_018361,NM_001147,NM_001118887	chr8,chr8,chr8,chr8	-,+,-,-	ANGPT2,AGPAT5,ANGPT2,ANGPT2	959,146001,959,959
chr7:1177298-1177628	chr7	+	1177442	1177622	True	NM_001134396,NM_001134395,NM_032350,NM_001098201	chr7,chr7,chr7,chr7	-,-,-,+	C7orf50,C7orf50,C7orf50,GPER	321,321,321,-49770
chr11:62381804-62382010	chr11	+	62381863	62382007	True	NM_153265,NM_012200,NM_000327	chr11,chr11,chr11	-,-,+	EML3,B3GAT3,ROM1	-1626,7491,-1701
chr18:53645822-53646575	chr18	+	53646340	53646564	True	NM_003199,NM_015285	chr18,chr18	-,+	TCF4,WDR7	-390480,672051
chr19:11974268-11974795	chr19	+	11974323	11974644	True	NM_152262,NM_001080493	chr19,chr19	+,-	ZNF439,ZNF823	2199,-124563
chr5:73976063-73977897	chr5	+	73976240	73977743	True	NM_003633,NM_000521	chr5,chr5	-,+	ENC1,HEXB	-38991,3225
chr16:48644139-48644651	chr16	+	48644185	48644466	True	NM_153029,NM_031490	chr16,chr16	-,+	N4BP1,LONP2	-65,-366025
chr19:6437018-6437834	chr19	+	6437433	6437551	True	NM_139161,NM_173637	chr19,chr19	+,-	CRB3,SLC25A41	26708,-3643
chr10:97193914-97194707	chr10	+	97193923	97194605	True	NM_006434,NM_207321,NM_001034956,NM_001034957,NM_001034954,NM_001034955	chr10,chr10,chr10,chr10,chr10,chr10	-,+,-,-,-,-	SORBS1,C10orf129,SORBS1,SORBS1,SORBS1,SORBS1	6382,-240017,6382,6382,6382,6382
chr6:89859893-89861517	chr6	+	89859965	89861539	True	NM_001010853,NM_080743	chr6,chr6	+,-	PM20D2,SRSF12	-4253,-32165
chr6:123317172-123317400	chr6	+	123317210	123317364	True	NM_001010852,NM_020755	chr6,chr6	+,-	CLVS2,SERINC1	217,-524258
chr12:67075252-67076885	chr12	+	67075314	67076825	True	NM_021150,NM_001178074,NM_033647	chr12,chr12,chr12	-,-,+	GRIP1,GRIP1,HELB	-2389,-2389,-379009
chrX:47439715-47440054	chrX	+	47439715	47439781	True	NM_006950,NM_003254	chrX,chrX	-,+	SYN1,TIMP1	39525,1908
chr5:88185586-88185852	chr5	+	88185634	88185890	True	NM_006467,NM_002397,NM_001193350	chr5,chr5,chr5	+,-,-	POLR3G,MEF2C,MEF2C	1584790,-6351,-6351
chr17:26127520-26128585	chr17	+	26127526	26128644	True	NM_000625,NR_024043	chr17,chr17	-,+	NOS2,LGALS9	29,-169403
chr1:204338801-204339500	chr1	+	204338874	204339524	True	NM_001204171,NR_027022,NM_014935	chr1,chr1,chr1	+,-,-	MDM4,LOC127841,PLEKHA6	145982,-27,-9830
chr7:44840090-44840575	chr7	+	44840283	44840348	True	NM_138635,NM_021130	chr7,chr7	-,+	H2AFV,PPIA	47432,-4100
chr4:46995397-46995785	chr4	+	46995439	46995783	True	NM_000809,NM_000812,NM_001204267,NM_001204266	chr4,chr4,chr4,chr4	-,+,-,-	GABRA4,GABRB1,GABRA4,GABRA4	691,37511,83,83
chr7:14777486-14778835	chr7	+	14777667	14778741	True	NM_001195280,NM_004080	chr7,chr7	+,-	LOC100506049,DGKB	1787763,102391
chr14:55707871-55709841	chr14	+	55708465	55709827	True	NM_017943,NM_014750	chr14,chr14	+,-	FBXO34,DLGAP5	28193,-50069
chr7:117505484-117507466	chr7	+	117505862	117507483	True	NM_033427,NM_016200	chr7,chr7	-,+	CTTNBP2,NAA38	6128,316602
chr1:46087000-46087586	chr1	+	46087044	46087406	True	NM_001190182,NM_001114938,NM_152298	chr1,chr1,chr1	-,-,+	CCDC17,CCDC17,NASP	2375,2375,-37435
chr7:138361150-138361739	chr7	+	138361154	138361638	True	NM_001139456,NM_001085429	chr7,chr7	-,+	SVOPL,TMEM213	2202,121100
chr1:166846141-166846681	chr1	+	166846169	166846729	True	NM_017542,NM_053053	chr1,chr1	+,-	POGK,TADA1	-37505,-515
chr5:53155628-53155959	chr5	+	53155725	53155987	True	NR_030307,NM_002495	chr5,chr5	-,+	MIR581,NDUFS4	91492,-299311
chr1:161182986-161184522	chr1	+	161183186	161184522	True	NM_004106,NM_001643	chr1,chr1	+,-	FCER1G,APOA2	564,8946
chr18:51753937-51754613	chr18	+	51754278	51754548	True	NR_002970,NM_007195,NM_015832,NM_003927	chr18,chr18,chr18,chr18	-,+,-,-	SNORA37,POLI,MBD2,MBD2	-5496,41300,-3120,-3120
chr9:139869640-139870088	chr9	+	139869707	139869947	True	NM_000954,NM_004669,NM_207510	chr9,chr9,chr9	+,-,+	PTGDS,CLIC3,LCNL1	2008,21127,7497
chr17:75279118-75279562	chr17	+	75279263	75279589	True	NM_001113492,NM_001113491,NR_036200	chr17,chr17,chr17	+,+,-	SEPT9,SEPT9,MIR4316	4383,-1823,113597
chr18:21268811-21269323	chr18	+	21268849	21269260	True	NM_001127717,NM_173505,NM_198129	chr18,chr18,chr18	+,-,+	LAMA3,ANKRD29,LAMA3	301,-26000,301
chr8:33880317-33882225	chr8	+	33880411	33882239	True	NM_032509,NM_024025	chr8,chr8	+,-	MAK16,DUSP26	-537777,-422972
chr15:53098417-53098618	chr15	+	53098472	53098621	True	NM_004498,NM_002748	chr15,chr15	-,+	ONECUT1,MAPK6	-16263,-787112
chr5:1446991-1448780	chr5	+	1447268	1448530	True	NM_182632,NM_001044	chr5,chr5	+,-	SLC6A18,SLC6A3	-221853,-1725
chr7:5112379-5112602	chr7	+	5112480	5112624	True	NR_015343,NR_034163	chr7,chr7	+,-	LOC389458,ZNF890P	-840,71603
chr18:52510116-52510826	chr18	+	52510386	52510875	True	NM_004163,NM_001143829	chr18,chr18	+,-	RAB27B,CCDC68	-14611,114454
chr11:83979797-83981700	chr11	+	83979927	83981739	True	NM_182603,NM_001142700	chr11,chr11	+,-	ANKRD42,DLG2	-1074688,2634
chr22:39547685-39547945	chr22	+	39547713	39547991	True	NM_181773,NM_175709	chr22,chr22	+,-	APOBEC3H,CBX7	-54535,597
chr10:38642745-38644086	chr10	+	38643034	38643865	True	NR_027269,NR_003086	chr10,chr10	-,+	SEPT7L,HSD17B7P2	47965,1442
chr10:38642745-38644086	chr1	+	162758244	162758687	False	NM_178550,NM_016371	chr1,chr1	-,+	C1orf110,HSD17B7	79969,1808
chr19:19649927-19650550	chr19	+	19649976	19650567	True	NM_032037,NM_153221	chr19,chr19	-,+	TSSK6,CILP2	-23507,-953
chr8:38827208-38828172	chr8	+	38827246	38828003	True	NM_001024380,NM_153692	chr8,chr8	-,+	TM2D2,HTRA4	26101,3664
chr8:94732370-94733021	chr8	+	94732516	94732797	True	NR_027259,NR_033858	chr8,chr8	+,-	C8orf39,LOC642924	19541,-19855
chr17:62400234-62401029	chr17	+	62400546	62401044	True	NM_000442,NM_001085423	chr17,chr17	-,+	PECAM1,C17orf60	6089,60524
chr2:201685204-201686714	chr2	+	201685524	201686178	True	NM_001162407,NM_014670	chr2,chr2	-,+	CLK1,BZW1	43162,-8928
chr1:178068951-178069370	chr1	+	178069110	178069276	True	NR_027982,NM_170692	chr1,chr1	-,+	LOC100302401,RASAL2	-5982,-6307
chr3:15261427-15262993	chr3	+	15261759	15262429	True	NM_014296,NR_027927	chr3,chr3	+,-	CAPN7,COL6A4P1	-14085,-14293
chr19:55548301-55548864	chr19	+	55548428	55548646	True	NM_001083899,NM_133180,NM_016363	chr19,chr19,chr19	-,+,-	GP6,EPS8L1,GP6	1036,38574,1036
chr21:40823632-40823886	chr21	+	40823695	40823826	True	NM_152505,NM_007341,NM_001001713	chr21,chr21,chr21	-,+,+	LCA5L,SH3BGR,SH3BGR	-7567,-1,-5949
chr3:184098629-184099012	chr3	+	184098730	184099018	True	NM_001177598,NM_003741,NM_000460,NM_001177597	chr3,chr3,chr3,chr3	-,+,-,-	THPO,CHRD,THPO,THPO	-2798,-920,-2798,-2798
chrX:119708346-119709421	chrX	+	119708390	119709456	True	NM_014060,NM_003588	chrX,chrX	+,-	MCTS1,CUL4B	28287,278
chr17:43510401-43511195	chr17_ctg5_hap1	+	125692	126273	False	NM_001113738,NM_174919,NM_199282	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	+,-,-	ARL17A,ARHGAP27,ARHGAP27	69447,-285,-7556
chr17:43510401-43511195	chr17	+	43510567	43511191	True	NR_024435,NM_174919,NM_199282	chr17,chr17,chr17	+,-,-	LOC100133991,ARHGAP27,ARHGAP27	-171060,-285,-7555
chr17:43510401-43511195	chr17	+	62778009	62778067	False	NR_026899,NM_138363,NR_027487	chr17,chr17,chr17	-,+,-	LOC146880,CCDC45,LOC146880	108,-274910,-387
chr17:43510401-43511195	chr17	-	66192115	66192173	False	NR_027283,NM_001174166	chr17,chr17	+,-	LOC440461,SLC16A6	2627,95290
chr2:239009445-239009779	chr2	+	239009517	239009799	True	NM_194312,NM_030768	chr2,chr2	+,-	ESPNL,ILKAP	-619,102575
chr1:28054477-28054954	chr1	+	28054680	28054862	True	NM_152660,NM_022873,NM_001143915,NM_001143914,NM_001143913,NM_001143912	chr1,chr1,chr1,chr1,chr1,chr1	+,-,+,+,+,+	FAM76A,IFI6,FAM76A,FAM76A,FAM76A,FAM76A	-2253,-55956,-2253,-2253,-2253,-2253
chr8:80940897-80942044	chr8	+	80941263	80942070	True	NM_007029,NM_014018	chr8,chr8	+,-	STMN2,MRPS28	-418265,486
chr17:55925216-55925894	chr17	+	55925378	55925680	True	NM_016070,NM_080677	chr17,chr17	-,+	MRPS23,DYNLL2	1813,235099
chr7:99355037-99355624	chr7	+	99355143	99355625	True	NM_022820,NM_000765	chr7,chr7	+,-	CYP3A43,CYP3A7	70010,-22324
chr15:90648333-90648965	chr15	+	90648408	90648890	True	NM_002168,NM_020210	chr15,chr15	-,+	IDH2,SEMA4B	-2700,79261
chr6:27805277-27805969	chr6	+	27805305	27805720	True	NM_003510,NM_003520,NM_003541	chr6,chr6,chr6	-,+,-	HIST1H2AK,HIST1H2BN,HIST1H4K	448,719,-6000
chr16:3626754-3627152	chr16	+	3627056	3627188	True	NM_024793,NM_178844	chr16,chr16	+,-	CLUAP1,NLRC3	-67213,254
chr5:80597678-80598010	chr5	+	80597832	80597926	True	NM_032280,NR_034122,NR_034123,NR_034121,NM_001131035,NM_001131036	chr5,chr5,chr5,chr5,chr5,chr5	+,-,-,-,+,+	ZCCHC9,LOC100131067,LOC100131067,LOC100131067,ZCCHC9,ZCCHC9	-481,-444,-444,-444,-481,-481
chr2:122407673-122407898	chr2	+	122407746	122407866	True	NM_015282,NR_037858,NM_001142274,NR_037857,NR_037856,NM_001142273	chr2,chr2,chr2,chr2,chr2,chr2	-,+,-,+,+,-	CLASP1,LOC254128,CLASP1,LOC254128,LOC254128,CLASP1	-694,-567,-694,-567,-232,-694
chr1:182025948-182026176	chr1	+	182026021	182026219	True	NR_034131,NM_001009992	chr1,chr1	+,-	NCRNA00272,ZNF648	350536,4678
chrX:129039400-129039702	chrX	+	129039606	129039707	True	NM_001166221,NM_006649,NM_016032	chrX,chrX,chrX	+,+,-	UTP14A,UTP14A,ZDHHC9	389,389,-61696
chr7:134138120-134139117	chr7	+	134138207	134139150	True	NM_001628,NM_020299	chr7,chr7	-,+	AKR1B1,AKR1B10	4788,73193
chr1:200862871-200863684	chr1	+	200862906	200863652	True	NM_001142569,NM_018265,NM_017596	chr1,chr1,chr1	+,+,-	C1orf106,C1orf106,KIF21B	346,-2318,129226
chr5:141392900-141393794	chr5	+	141393301	141393815	True	NM_005471,NM_183401	chr5,chr5	-,+	GNPDA1,RNF14	-681,-44641
chr4:139936302-139936797	chr4	+	139936305	139936771	True	NM_006874,NM_012118	chr4,chr4	-,+	ELF2,CCRN4L	68926,171
chr19:59064708-59065035	chr19	+	59065008	59065084	True	NM_198426,NR_027334,NM_003969,NM_014453,NM_005762	chr19,chr19,chr19,chr19,chr19	-,+,-,-,+	CHMP2A,LOC100131691,UBE2M,CHMP2A,TRIM28	1321,5468,5309,1452,-9223
chr20:30700419-30702224	chr20	+	30700551	30702097	True	NR_002781,NM_014742	chr20,chr20	-,+	TSPY26P,TM9SF4	76116,-3293
chr17:38717832-38718730	chr17	+	38717922	38718620	True	NM_001552,NM_001838	chr17,chr17	+,-	IGFBP4,CCR7	-118297,3166
chr19:41197523-41197982	chr19	+	41197635	41197743	True	NM_025194,NM_004756	chr19,chr19	+,-	ITPKC,NUMBL	25264,-1079
chr22:39967079-39968731	chr22	+	39967160	39968678	True	NM_001003406,NM_194326,NM_021096	chr22,chr22,chr22	+,-,+	CACNA1I,RPS19BP1,CACNA1I	-453,-38300,-453
chr3:44596928-44598697	chr3	+	44596996	44598724	True	NM_025169,NM_181489,NM_018651	chr3,chr3,chr3	+,-,+	ZNF167,ZNF445,ZNF167	-334,-77834,-334
chr12:120739322-120739596	chr12	+	120739451	120739529	True	NM_000928,NM_012240	chr12,chr12	-,+	PLA2G1B,SIRT4	26129,594
chr10:95255831-95256170	chr10	+	95255981	95256145	True	NM_001127182,NM_133337,NM_018131	chr10,chr10,chr10	+,-,+	CEP55,MYOF,CEP55	223,-13907,243
chr4:497281-497936	chr4	+	497295	497928	True	NM_001127178,NM_133474,NM_017733	chr4,chr4,chr4	+,-,+	PIGG,ZNF721,PIGG	-4357,-3853,-4357
chr15:45313627-45313846	chr15	+	45313626	45313894	True	NR_034039,NM_003104,NM_014080	chr15,chr15,chr15	+,+,-	SORD,SORD,DUOX2	1407,1407,92515
chr10:97515850-97516345	chr10	+	97515888	97516384	True	NM_001164178,NM_001164179,NM_001776,NM_001164183,NM_001164182,NM_001164181,NM_001143973	chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,+,-	ENTPD1,ENTPD1,ENTPD1,ENTPD1,ENTPD1,ENTPD1,TCTN3	-530,-266,-266,-266,-266,-530,-61988
chr1:28560287-28560815	chr1	+	28560388	28560629	True	NM_178191,NM_016311,NM_014280,NM_178190	chr1,chr1,chr1,chr1	+,+,-,+	ATPIF1,ATPIF1,DNAJC8,ATPIF1	1972,1972,-846,1972
chr17:3460069-3460497	chr17	+	3460075	3460527	True	NM_145068,NM_001031681	chr17,chr17	-,+	TRPV3,CTNS	812,79234
chr6:37136724-37136978	chr6	+	37136785	37136997	True	NM_145316,NM_002648	chr6,chr6	-,+	TMEM217,PIM1	88466,924
chr9:140092653-140093675	chr9	+	140092993	140093523	True	NM_003731,NM_013366,NM_001128228,NM_001144028,NM_001144026,NM_001144027,NM_053045,NM_014434	chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9	+,-,-,+,+,+,-,+	SSNA1,ANAPC2,TPRN,NDOR1,NDOR1,NDOR1,TMEM203,NDOR1	-9990,-9936,1690,6595,6595,6595,6617,6595
chr6:165504537-165505353	chr6	+	165504687	165505380	True	NM_144980,NR_027284	chr6,chr6	-,+	C6orf118,LOC441177	217782,895658
chr2:26912643-26914109	chr2	+	26912831	26913743	True	NM_002246,NM_001029881	chr2,chr2	+,-	KCNK3,CIB4	1837,-48620
chr17:47864061-47865041	chr17	+	47864480	47865078	True	NM_007067,NM_001199155,NM_001199156,NM_001199157,NM_001199158,NM_030802	chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,-	MYST2,MYST2,MYST2,MYST2,MYST2,FAM117A	902,902,902,902,902,-22962
chr6:135217765-135218703	chr6	+	135218092	135218738	True	NM_001193480,NM_005375	chr6,chr6	-,+	ALDH8A1,MYB	52572,283714
chr17:42400868-42401301	chr17	+	42400924	42401350	True	NM_001143780,NM_001144825,NM_016016	chr17,chr17,chr17	-,+,-	SLC25A39,RUNDC3A,SLC25A39	917,-15048,917
chr13:115042307-115042638	chr13	+	115042311	115042478	True	NM_080687,NM_007368,NM_023011	chr13,chr13,chr13	+,-,+	UPF3A,RASA3,UPF3A	4580,-144216,4580
chrX:48827405-48827641	chrX	+	48827553	48827680	True	NM_001167992,NM_004979	chrX,chrX	+,-	PQBP1,KCND1	-71829,621
chr18:30091896-30092969	chr18	+	30091926	30092955	True	NR_003558,NM_022751	chr18,chr18	+,-	WBP11P1,FAM59A	-358,-41479
chr1:155160157-155161039	chr1	+	155160184	155160722	True	NM_001204287,NM_001204286,NM_001204285,NM_001204297,NM_001204290,NM_001204291,NM_001204292,NM_001204293,NM_002456,NM_001204296,NM_001204289,NM_001204288,NM_001044393,NM_001044392,NM_001044391,NM_001044390,NR_030281,NM_001018017,NM_001018016,NM_001204295,NM_001204294	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,+,-,-,-,-	MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MIR92B,MUC1,MUC1,MUC1,MUC1	2034,2034,2034,2034,2034,2034,2034,2034,2034,2034,2034,2034,2034,2034,2034,2034,4245,2034,2034,2034,2034
chr16:47539208-47539454	chr16	+	47539249	47539498	True	NM_030790,NM_001031835	chr16,chr16	-,+	ITFG1,PHKB	-44234,-44090
chr4:76651319-76651811	chr4	+	76651527	76651827	True	NM_203505,NM_003715	chr4,chr4	-,+	G3BP2,USO1	-52860,-1750
chr17:17493008-17493269	chr17	+	17493007	17493193	True	NM_007169,NM_030665,NM_148172	chr17,chr17,chr17	-,+,-	PEMT,RAI1,PEMT	-7262,91593,1851
chr14:53622127-53623523	chr14	+	53622388	53623426	True	NM_030637,NM_001160148,NM_001160147,NM_145251	chr14,chr14,chr14,chr14	-,-,-,+	DDHD1,DDHD1,DDHD1,STYX	-2342,-2342,-2342,-425556
chr3:48482516-48484018	chr3	+	48482993	48483791	True	NM_024661,NM_130384,NM_015933,NM_032166	chr3,chr3,chr3,chr3	-,+,+,+	CCDC51,ATRIP,CCDC72,ATRIP	-1464,4426,-1358,4426
chr3:112013077-112014212	chr3	+	112013116	112013941	True	NM_183061,NM_001004196	chr3,chr3	-,+	SLC9A10,CD200	-42,37974
chrX:48956641-48957263	chrX	+	48956813	48957107	True	NM_001163323,NM_007075	chrX,chrX	+,-	CCDC120,WDR45	-40341,1016
chr6:31800389-31801231	chr6_qbl_hap6	+	3094212	3094660	False	NM_001040437,NR_002745,NM_005527,NR_002742,NM_005346,NM_001040438	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,SNORD52,HSPA1B,C6orf48	1691,2038,-17730,3848,-5101,1691
chr6:31800389-31801231	chr6_dbb_hap3	+	3086143	3086590	False	NM_001040437,NR_002745,NM_005527,NR_002742,NM_005346,NM_001040438	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,SNORD52,HSPA1B,C6orf48	1689,2036,-17721,3848,-5096,1689
chr6:31800389-31801231	chr6	+	31800556	31801003	True	NM_001040437,NR_002745,NM_005527,NR_002742,NM_005346,NM_001040438	chr6,chr6,chr6,chr6,chr6,chr6	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,SNORD52,HSPA1B,C6orf48	1689,2036,-17721,3849,-5096,1689
chr6:31800389-31801231	chr6_apd_hap1	+	3115316	3115763	False	NM_001040437,NR_002745,NM_005527,NR_002742,NM_005346,NM_001040438	chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,SNORD52,HSPA1B,C6orf48	1683,2030,-17720,3844,-5092,1683
chr6:31800389-31801231	chr6_cox_hap2	+	3310130	3310577	False	NM_001040437,NR_002745,NM_005527,NR_002742,NM_005346,NM_001040438	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,SNORD52,HSPA1B,C6orf48	1691,2038,-17715,3849,-5088,1691
chr7:104654862-104655114	chr7	+	104655091	104655155	True	NM_182931,NR_024586,NM_018682	chr7,chr7,chr7	+,-,+	MLL5,LOC100216545,MLL5	-505,-503,-505
chr21:43735498-43735739	chr21	+	43735510	43735750	True	NM_003226,NM_001001895	chr21,chr21	-,+	TFF3,UBASH3A	6,88268
chr10:73975737-73976047	chr10	+	73975804	73976092	True	NM_173473,NM_001198798,NM_001198800,NM_001198799,NM_015947	chr10,chr10,chr10,chr10,chr10	+,-,-,-,-	ANAPC16,ASCC1,ASCC1,ASCC1,ASCC1	-49,-53,141,141,-53
chr15:91429057-91430548	chr15	+	91429284	91430464	True	NM_002005,NM_001143783,NM_198527,NM_001143784,NM_001143785	chr15,chr15,chr15,chr15,chr15	+,+,-,+,+	FES,FES,HDDC3,FES,FES	-1647,-1059,45360,-1059,-1670
chr3:13522086-13522576	chr3	+	13522181	13522609	True	NM_001136041,NM_024827,NM_024923	chr3,chr3,chr3	+,+,-	HDAC11,HDAC11,NUP210	-388,-517,-60372
chr20:49522671-49523801	chr20	+	49522845	49523365	True	NM_015339,NM_014484	chr20,chr20	-,+	ADNP,MOCS3	24215,51997
chr10:28563321-28564197	chr10	+	28563531	28564243	True	NR_024557,NM_173496	chr10,chr10	+,-	WAC,MPP7	257183,6874
chr11:10879183-10879593	chr11	+	10879199	10879641	True	NM_001143667,NR_034137,NM_021211	chr11,chr11,chr11	-,+,-	ZBED5,LOC729013,ZBED5	29,122,29
chr1:202828582-202829450	chr1	+	202828681	202829400	True	NM_002871,NR_002929	chr1,chr1	-,+	RABIF,LOC148709	28913,1481
chr7:19775296-19776152	chr7	+	19775307	19776098	True	NM_001002926,NM_002214	chr7,chr7	-,+	TWISTNB,ITGB8	-26647,594626
chr19:9933697-9934437	chr19	+	9933987	9934453	True	NM_001048241,NM_024292,NM_017703	chr19,chr19,chr19	+,+,-	UBL5,UBL5,FBXL12	4114,4114,-4256
chr3:39308883-39309213	chr3	+	39308929	39309139	True	NM_005201,NM_001337	chr3,chr3	+,-	CCR8,CX3CR1	62057,12438
chr2:218619942-218620862	chr2	+	218620250	218620898	True	NR_034176,NR_026597	chr2,chr2	+,-	RUFY4,DIRC3	278758,468
chr5:149794786-149795364	chr5	+	149794891	149795277	True	NM_004355,NM_001025158,NM_001025159,NM_001195141	chr5,chr5,chr5,chr5	-,-,-,+	CD74,CD74,CD74,TCOF1	-2568,-2559,-2568,-57741
chr20:4983952-4985365	chr20	+	4984173	4985135	True	NM_005116,NR_028370,NM_203327	chr20,chr20,chr20	-,+,-	SLC23A2,PCNA-AS1,SLC23A2	-2028,115096,5854
chr11:62372430-62372781	chr11	+	62372457	62372828	True	NM_004739,NM_153265,NM_000327	chr11,chr11,chr11	-,-,+	MTA2,EML3,ROM1	-3154,7460,7384
chr7:63667716-63668287	chr7	+	63667715	63668095	True	NM_001159524,NM_178558	chr7,chr7	+,-	ZNF735,ZNF680	-185,355460
chr19:57650875-57651837	chr19	+	57651133	57651483	True	NM_020903,NM_052882	chr19,chr19	+,-	USP29,ZIM3	-19685,5137
chr17:56161536-56161935	chr17	+	56161623	56161953	True	NR_034041,NM_080677	chr17,chr17	-,+	SRSF1,DYNLL2	-76916,-894
chr1:112298973-112299294	chr1	+	112298979	112299308	True	NM_198926,NM_007204	chr1,chr1	-,+	C1orf183,DDX20	-560,-848
chr17:75368173-75368748	chr17	+	75368321	75368683	True	NM_001113494,NM_001113493,NR_036200	chr17,chr17,chr17	+,+,-	SEPT9,SEPT9,MIR4316	3481,588,24503
chr18:61331230-61332938	chr18	+	61331381	61332527	True	NM_080475,NM_006919	chr18,chr18	+,-	SERPINB11,SERPINB3	37666,-2184
chr6:12288755-12290293	chr6	+	12289042	12290160	True	NM_001168319,NM_032744,NM_001955	chr6,chr6,chr6	+,-,+	EDN1,C6orf105,EDN1	368,-509762,368
chr2:145085676-145086456	chr2	+	145086047	145086496	True	NR_033870,NM_001164629	chr2,chr2	+,-	DKFZp686O1327,GTDC1	339037,3641
chr6:27100994-27101599	chr6	+	27101226	27101615	True	NM_021064,NM_003495,NM_021058	chr6,chr6,chr6	+,+,-	HIST1H2AG,HIST1H4I,HIST1H2BJ	-462,5472,-651
chr3:49204001-49205336	chr3	+	49204097	49205311	True	NM_173546,NM_022903	chr3,chr3	+,-	KLHDC8B,CCDC71	3706,-312
chr8:102795247-102796390	chr8	+	102795252	102796218	True	NM_024915,NM_032041	chr8,chr8	+,-	GRHL2,NCALD	-290635,7279
chr15:42119537-42119823	chr15	+	42119587	42119791	True	NR_036195,NM_001198588,NM_001114632,NM_005090	chr15,chr15,chr15,chr15	-,+,+,+	MIR4310,JMJD7-PLA2G4B,JMJD7,JMJD7-PLA2G4B	39008,491,491,491
chr14:23845994-23846313	chr14	+	23846077	23846291	True	NM_022789,NM_138460,NM_032459,NM_172314,NM_001037288	chr14,chr14,chr14,chr14,chr14	+,+,-,+,+	IL25,CMTM5,EFS,IL25,CMTM5	-4058,-111,-11235,-4110,-111
chr9:36170119-36170818	chr9	+	36170157	36170815	True	NM_001190383,NM_005893	chr9,chr9	-,+	GNE,CCIN	87731,-821
chr1:223307729-223308297	chr1	+	223307801	223308343	True	NM_003268,NM_152610	chr1,chr1	-,+	TLR5,C1orf65	8331,258371
chrX:27882119-27882458	chrX	+	27882227	27882443	True	NM_182506,NM_001017930	chrX,chrX	+,-	MAGEB10,DCAF8L1	-56173,117173
chr2:202507893-202508146	chr2	+	202507895	202508087	True	NM_152388,NM_001044385,NM_139158	chr2,chr2,chr2	-,-,+	ALS2CR4,ALS2CR4,CDK15	-485,187,163110
chr6:33092128-33093426	chr6	+	33092435	33092600	True	NM_033554,NR_001435	chr6,chr6	-,+	HLA-DPA1,HLA-DPB2	-51057,-12193
chr6:33092128-33093426	chr6_apd_hap1	+	4379287	4379362	False	NM_033554,NR_001435	chr6_apd_hap1,chr6_apd_hap1	-,+	HLA-DPA1,HLA-DPB2	-51108,-12281
chr15:63248212-63248808	chr15	+	63248510	63248821	True	NM_000366,NM_015920	chr15,chr15	+,-	TPM1,RPS27L	86016,200971
chr18:3834160-3834505	chr18	+	3834339	3834531	True	NR_024101,NM_001003809	chr18,chr18	+,-	FLJ35776,DLGAP1	-240290,10815
chr2:222825659-222826405	chr2	+	222825739	222826309	True	NM_153038,NM_001127366	chr2,chr2	+,-	CCDC140,PAX3	336556,337464
chr5:99887668-99888621	chr5	+	99887697	99888674	True	NR_027503,NM_198507	chr5,chr5	-,+	LOC100133050,FAM174A	-163739,-16637
chr9:111879691-111881533	chr9	+	111879845	111881425	True	NM_032012,NM_017832	chr9,chr9	-,+	C9orf5,C9orf6	850,-183223
chr8:99956291-99956560	chr8	+	99956355	99956559	True	NM_053001,NM_006281,NM_001142462	chr8,chr8,chr8	+,-,+	OSR2,STK3,OSR2	71,-118446,71
chr6:170200936-170201650	chr6	+	170200994	170201548	True	NR_026781,NR_026780	chr6,chr6	-,+	NCRNA00242,C6orf208	-2073,-10876
chr14:45602592-45603183	chr14	+	45602742	45603167	True	NM_002013,NM_020937	chr14,chr14	-,+	FKBP3,FANCM	615,1968
chr5:137606975-137607473	chr5	+	137607028	137607217	True	NM_001496,NM_001135647	chr5,chr5	-,+	GFRA3,FAM53C	3087,66006
chr11:66140246-66141901	chr11	+	66140353	66141335	True	NM_001532,NM_178864	chr11,chr11	-,+	SLC29A2,NPAS4	-1062,47139
chr19:51505694-51506432	chr19	+	51505760	51506426	True	NM_012315,NM_144505,NM_144507,NM_144506,NM_014441,NM_007196	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,+,-	KLK9,KLK8,KLK8,KLK8,SIGLEC9,KLK8	6514,-802,-802,-802,121710,-802
chr4:103746973-103747716	chr4	+	103746974	103747478	True	NM_001008388,NM_003340,NM_181887,NM_181891,NM_181892,NM_181889,NM_181888,NM_181886	chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4	+,-,-,-,-,-,-,-	CISD2,UBE2D3,UBE2D3,UBE2D3,UBE2D3,UBE2D3,UBE2D3,UBE2D3	42656,1678,1281,1281,913,1880,1678,1678
chrX:98070691-98071398	chrX	+	98070778	98071323	True	NM_022144,NR_024608	chrX,chrX	+,-	TNMD,LOC442459	1768466,1123575
chr13:43162473-43163006	chr13	+	43162579	43163033	True	NM_003701,NM_001002264	chr13,chr13	+,-	TNFSF11,EPSTI1	-14339,403394
chr5:137474356-137474684	chr5	+	137474366	137474685	True	NM_003551,NM_005733	chr5,chr5	-,+	NME5,KIF20A	504,39731
chr18:47813190-47813628	chr18	+	47813387	47813659	True	NM_001204137,NM_001204138,NM_001204139,NM_015844,NM_015847,NM_015846,NM_001204140,NM_001204141,NM_001101654,NM_001204136,NM_001204151,NM_001039535,NM_001204143,NM_015845,NM_002384,NM_001204142,NM_014593	chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18	-,-,-,-,-,-,-,-,-,-,-,+,-,-,-,-,-	MBD1,MBD1,MBD1,MBD1,MBD1,MBD1,MBD1,MBD1,CXXC1,MBD1,MBD1,SKA1,MBD1,MBD1,MBD1,MBD1,CXXC1	-5243,-5243,-5243,-5243,-5243,-5243,-5243,-5243,1083,-5243,-7000,87732,-5250,-5243,-5243,-5243,1083
chrM:8152-9293	chr1	+	569394	569715	False	NM_001005221,NR_015368	chr1,chr1	-,+	OR4F29,LOC643837	52376,193348
chr15:79237291-79237501	chr15	+	79237298	79237392	True	NM_004390,NM_206839	chr15,chr15	-,+	CTSH,MORF4L1	78,-72177
chr19:58692054-58694009	chr19	+	58693061	58693887	True	NM_024620,NM_016325,NM_133502,NM_016324	chr19,chr19,chr19,chr19	-,+,+,+	ZNF329,ZNF274,ZNF274,ZNF274	-30913,508,508,508
chr15:38545503-38546184	chr15	+	38545508	38546074	True	NM_152594,NM_001128602	chr15,chr15	+,-	SPRED1,RASGRP1	-507,310989
chr7:66461335-66461738	chr7	+	66461380	66461672	True	NM_018264,NM_016038	chr7,chr7	+,-	TYW1,SBDS	144,-792
chr7:66461335-66461738	chr7	-	72299202	72299259	False	NR_001588,NR_024110,NR_024111,NR_024109,NM_001145441,NM_001145440	chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,-,-	SBDSP1,SBDSP1,SBDSP1,SBDSP1,TYW1B,TYW1B	692,692,692,692,-389,-389
chr1:212734878-212736270	chr1	+	212734888	212736147	True	NM_001030287,NM_018664	chr1,chr1	+,-	ATF3,BATF3	2549,137241
chr19:19976989-19977398	chr19	+	19977138	19977286	True	NM_021047,NM_001145404	chr19,chr19	+,-	ZNF253,ZNF506	-475,-44578
chr7:20369530-20369821	chr7	+	20369533	20369727	True	NM_182762,NM_002214	chr7,chr7	-,+	MACC1,ITGB8	-112520,997
chr7:23510421-23510849	chr7	+	23510439	23510737	True	NR_026676,NM_006547	chr7,chr7	+,-	RPS2P32,IGF2BP3	19269,-444
chr11:70929199-70929596	chr11	+	70929583	70929645	True	NM_018161,NM_012309	chr11,chr11	+,-	NADSYN1,SHANK2	234571,6213
chr8:145633790-145634186	chr8	+	145633789	145634193	True	NR_031600,NM_130849,NM_017767,NM_174922,NM_013291	chr8,chr8,chr8,chr8,chr8	-,-,-,+,-	MIR1234,SLC39A4,SLC39A4,ADCK5,CPSF1	-8230,8130,7774,-36109,590
chr10:96533001-96534002	chr10	+	96533177	96534017	True	NM_000770,NM_000769	chr10,chr10	-,+	CYP2C8,CYP2C19	295287,-10772
chr19:35775202-35775624	chr19	+	35775446	35775645	True	NM_001199216,NM_152481,NM_002361,NM_080600,NM_021175	chr19,chr19,chr19,chr19,chr19	+,-,+,+,+	MAG,FAM187B,MAG,MAG,HAMP	7343,-55818,7343,7343,-2087
chr17:633608-635112	chr17	+	633929	635101	True	NM_018289,NM_024792	chr17,chr17	-,+	VPS53,FAM57A	-15833,745
chr17:17187007-17188515	chr17	+	17187193	17188275	True	NM_003653,NM_001199125,NM_020201	chr17,chr17,chr17	-,-,+	COPS3,COPS3,NT5M	-2576,-3181,18404
chr4:142587598-142588412	chr4	+	142587894	142588452	True	NM_020724,NR_037840	chr4,chr4	-,+	RNF150,IL15	-533278,-30196
chr1:99749362-99749715	chr1	+	99749680	99749754	True	NM_014839,NM_001037317	chr1,chr1	+,-	LPPR4,LPPR5	-19894,-279231
chr11:27015820-27016528	chr11	+	27015965	27016567	True	NM_178498,NM_203371	chr11,chr11	-,+	SLC5A12,FIBIN	-272391,-388
chrX:69482222-69483065	chrX	+	69482451	69482997	True	NM_004312,NM_002565	chrX,chrX	+,-	ARR3,P2RY4	5187,-2797
chr20:58178546-58179125	chr20	+	58178545	58179099	True	NM_080672,NM_014258	chr20,chr20	+,-	PHACTR3,SYCP2	503,328160
chr20:33465476-33466798	chr20	+	33466071	33466607	True	NM_178026,NR_028046,NM_018677,NM_001076552	chr20,chr20,chr20,chr20	-,+,+,+	GGT7,ACSS2,ACSS2,ACSS2	-5410,-3356,-1794,-1794
chr1:24636-24904	chr12	-	78853	78903	False	NR_028269,NR_026823	chr12,chr12	+,-	LOC100288778,FAM138D	9080,70559
chr1:24636-24904	chr19	+	66381	66549	False	NM_001005240,NR_033266	chr19,chr19	+,-	OR4F17,WASH5P	44129,4467
chr1:24636-24904	chr15	-	102506340	102506390	True	NR_034090	chr15	-	DDX11L9	12956
chr8:144677330-144677927	chr8	+	144677761	144677895	True	NM_001130053,NM_032378,NM_001130055,NM_001130056,NM_001130057,NM_032862,NM_001960,NM_001195203	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,-,+,-,-	EEF1D,EEF1D,EEF1D,EEF1D,EEF1D,TIGD5,EEF1D,EEF1D	2000,2000,2000,2000,1713,2178,2000,2000
chr11:17251111-17251573	chr11	+	17251114	17251230	True	NM_002645,NM_005013	chr11,chr11	-,+	PIK3C2A,NUCB2	-59760,47055
chr6:57067395-57068047	chr6	+	57067407	57067756	True	NM_183227,NM_004282	chr6,chr6	-,+	RAB23,BAG2	18551,-30360
chr6:25098187-25098738	chr6	+	25098346	25098676	True	NR_002174,NM_001173977	chr6,chr6	-,+	CMAH,LRRC16A	39426,180979
chr17:74600937-74602409	chr17	+	74601070	74601898	True	NM_006456,NR_004395	chr17,chr17	-,+	ST6GALNAC2,SNORD1A	-18925,-43406
chr3:183970450-183972212	chr3	+	183970896	183972066	True	NM_005787,NM_001006941,NM_033259,NM_032331,NM_014693,NR_024534,NR_024533	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,+,+,-,-	ALG3,ALG3,CAMK2N2,ECE2,ECE2,ALG3,ALG3	-4137,-3583,7248,-3502,-3502,-4137,-4137
chr19:51227941-51228200	chr19	+	51227986	51228158	True	NM_016148,NM_002975	chr19,chr19	-,+	SHANK1,CLEC11A	-7791,-1432
chrX:19819595-19820336	chrX	+	19819594	19819916	True	NM_001173456,NM_001024666	chrX,chrX	+,-	PDHA1,SH3KBP1	-457635,-1677
chr8:30513624-30513846	chr8	+	30513634	30513864	True	NM_002095,NM_005671	chr8,chr8	-,+	GTF2E2,UBXN8	1924,87825
chr1:10855718-10855970	chr1	+	10855779	10855999	True	NM_001079843,NM_007375,NM_017766	chr1,chr1,chr1	-,+,-	CASZ1,TARDBP,CASZ1	758,216679,758
chr20:30597350-30598948	chr20	+	30597626	30598985	True	NM_030815,NM_080625	chr20,chr20	-,+	PDRG1,C20orf160	-57743,-227
chr12:53613954-53614211	chr12	+	53614091	53614259	True	NM_001170790,NM_001042728	chr12,chr12	+,-	MFSD5,RARG	31110,51
chr5:130501092-130502352	chr5	+	130501180	130502370	True	NM_181705,NR_024611,NR_024610,NM_005340	chr5,chr5,chr5,chr5	+,-,-,-	LYRM7,HINT1,HINT1,HINT1	4270,-154,-146,-146
chr13:45697482-45698376	chr13	+	45697842	45697930	True	NM_004128,NM_198404	chr13,chr13	+,-	GTF2F2,KCTD4	-3267,77301
chr2:220437170-220437382	chr2	+	220437170	220437430	True	NM_002191,NM_015311,NM_001173431,NM_001173408	chr2,chr2,chr2,chr2	+,-,-,-	INHA,OBSL1,OBSL1,OBSL1	-267,-902,-902,-902
chr10:102893280-102893669	chr10	+	102893285	102893563	True	NM_005521,NM_001195517,NM_001085398	chr10,chr10,chr10	+,+,-	TLX1,TLX1,TLX1NB	-2275,-2275,-2382
chr2:71558504-71558788	chr2	+	71558603	71558705	True	NM_020459,NM_001014972,NM_014497	chr2,chr2,chr2	-,+,+	PAIP2B,ZNF638,ZNF638	-104370,183,183
chr21:45964572-45965055	chr21	+	45964643	45964910	True	NR_026548,NM_198691,NM_198693	chr21,chr21,chr21	+,-,-	C21orf90,KRTAP10-1,KRTAP10-2	-27596,-4565,6539
chr4:77139200-77140460	chr4	+	77139303	77140438	True	NM_005506,NM_001204255,NM_001136570	chr4,chr4,chr4	-,-,+	SCARB2,SCARB2,FAM47E	-4251,-4251,32414
chr1:92947904-92948265	chr1	+	92947934	92948208	True	NM_001127216,NM_001127215,NM_024813,NM_005263	chr1,chr1,chr1,chr1	-,-,+,-	GFI1,GFI1,RPAP2,GFI1	3470,1198,-183463,4275
chr12:101673463-101674101	chr12	+	101673634	101674110	True	NM_014503,NM_145913	chr12,chr12	+,-	UTP20,SLC5A8	-70,-69618
chr14:73392657-73392904	chr14	+	73392656	73392906	True	NM_181340,NM_181341,NM_015604,NM_012074,NM_001163508,NM_001163509	chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,-,+,+	DCAF4,DCAF4,DCAF4,DPF3,DCAF4,DCAF4	133,133,133,-31847,133,133
chr10:115532875-115533755	chr10	+	115532925	115533775	True	NM_182601,NM_014881	chr10,chr10	+,-	C10orf81,DCLRE1A	-8411,80136
chr22:32439101-32439309	chr22	+	32439190	32439358	True	NM_015372,NM_000343	chr22,chr22	-,+	C22orf24,SLC5A1	-97854,-222
chr3:119372617-119373894	chr3	+	119372759	119373640	True	NM_033364,NM_022135	chr3,chr3	+,-	C3orf15,POPDC2	48228,5816
chr4:33013395-33014196	chr4	+	33013398	33014201	True	NM_015230,NM_032457	chr4,chr4	-,+	ARAP2,PCDH7	3231828,-2291412
chr17:73510198-73510596	chr17	+	73510203	73510645	True	NM_207346,NM_020753,NM_001142643	chr17,chr17,chr17	+,-,-	TSEN54,CASKIN2,CASKIN2	1963,1032,-4245
chr12:121572488-121573064	chr12	+	121572614	121572843	True	NM_198213,NM_002562,NR_033949,NR_033948,NR_033952,NR_033953,NR_033950,NR_033951,NR_033956,NR_033954,NR_033955	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,+,+,+,+,+,+,+,+	OASL,P2RX7,P2RX7,P2RX7,P2RX7,P2RX7,P2RX7,P2RX7,P2RX7,P2RX7,P2RX7	-95834,-2043,-2043,-2043,-2043,-2052,-2043,-2043,-2043,-2043,-2043
chr1:16823058-16823968	chr1	+	16823344	16824013	True	NR_023386,NR_037446	chr1,chr1	-,+	CROCCP3,MIR3675	-4148,51395
chr4:122873093-122873499	chr4	+	122873173	122873532	True	NM_001130698,NM_005033	chr4,chr4	-,+	TRPC3,EXOSC9	-264,-150752
chr12:131648847-131649122	chr12	+	131648873	131649093	True	NR_026670,NM_194356	chr12,chr12	+,-	LOC116437,STX2	462,-325062
chr2:3607071-3607458	chr2	+	3607074	3607358	True	NM_001011,NM_002936	chr2,chr2	+,-	RPS7,RNASEH1	15494,-1134
chr21:47707408-47707775	chr21	+	47707408	47707616	True	NM_003906,NM_001006114,NM_058181	chr21,chr21,chr21	-,+,+	MCM3AP,YBEY,YBEY	-2172,-1200,-1200
chr19:3029493-3029728	chr19	+	3029506	3029728	True	NM_003260,NM_001144762,NM_024760	chr19,chr19,chr19	-,-,+	TLE2,TLE2,TLE6	-341,-4,-52021
chr12:52680260-52680763	chr12	+	52680348	52680748	True	NM_002284,NM_002281	chr12,chr12	+,-	KRT86,KRT81	14900,4601
chr21:38830894-38832798	chr21	+	38831036	38832766	True	NM_006052,NM_001396	chr21,chr21	-,+	DSCR3,DYRK1A	-191203,-38485
chr1:153416027-153417269	chr1	+	153416061	153417242	True	NM_001045479,NM_176823	chr1,chr1	-,+	S100A7L2,S100A7A	-3558,-27113
chr1:203097541-203097773	chr1	+	203097676	203097766	True	NM_001048230,NM_000674,NM_002479	chr1,chr1,chr1	+,+,-	ADORA1,ADORA1,MYOG	-891,-891,-42299
chr11:1858958-1859179	chr11	+	1858974	1859128	True	NM_001145829,NR_036185,NM_138567,NM_001145841,NM_003282	chr11,chr11,chr11,chr11,chr11	+,-,+,+,+	TNNI2,MIR4298,SYT8,TNNI2,TNNI2	1590,21688,-3351,2303,1104
chr18:24217247-24218611	chr18	+	24217315	24218575	True	NM_198991,NR_026908	chr18,chr18	-,+	KCTD1,C18orf16	1783,226696
chr16:56556438-56557435	chr16	+	56556450	56557386	True	NM_031885,NM_032935	chr16,chr16	-,+	BBS2,MT4	-2442,41574
chr11:14542101-14542692	chr11	+	14542129	14542706	True	NM_001143937,NM_002786,NM_000922	chr11,chr11,chr11	-,-,+	PSMA1,PSMA1,PDE3B	-138,-138,122562
chr11:102670190-102671677	chr11	+	102670191	102671410	True	NM_001080463,NM_002421,NM_001145938	chr11,chr11,chr11	+,-,-	DYNC2H1,MMP1,MMP1	308749,-1225,-1225
chr15:48513058-48514007	chr15	+	48513062	48514055	True	NM_016132,NM_001184832	chr15,chr15	-,+	MYEF2,SLC12A1	-42504,-14615
chr21:44748665-44749185	chr21	+	44748675	44749031	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	120872,98021
chr15:28575981-28576388	chr15	+	28576021	28576292	True	NM_004667,NR_033351	chr15,chr15	-,+	HERC2,GOLGA8F	-8726,47491
chr15:28575981-28576388	chr15	-	28825628	28825899	False	NR_036443,NR_033351	chr15,chr15	+,-	HERC2P9,GOLGA8F	73688,-47485
chr15:28575981-28576388	chr15	+	20720140	20720411	False	NR_036432,NR_027411	chr15,chr15	-,+	HERC2P3,GOLGA8C	-8707,47262
chr15:28575981-28576388	chr15	+	23386936	23387207	False	NR_036470,NR_002824	chr15,chr15	+,-	HERC2P7,HERC2P2	3514,-8677
chr15:28575981-28576388	chr15	+	23674638	23674909	False	NM_005664,NM_019066	chr15,chr15	+,-	MKRN3,MAGEL2	135544,218143
chr1:150579620-150580594	chr1	+	150579769	150580149	True	NM_207045,NR_036211	chr1,chr1	-,+	ENSA,MIR4257	21518,-55415
chr4:148654309-148655284	chr4	+	148654337	148655301	True	NM_138364,NM_024605	chr4,chr4	-,+	PRMT10,ARHGAP10	-49057,-943
chr2:239197470-239197676	chr2	+	239197544	239197714	True	NM_001139490,NM_022817	chr2,chr2	+,-	TRAF3IP1,PER2	31470,-337
chr1:175033424-175033709	chr1	+	175033598	175033750	True	NR_037606,NM_022093	chr1,chr1	-,+	MRPS14,TNN	-41007,3243
chr4:88440517-88441519	chr4	+	88440516	88441096	True	NM_014208,NM_004684,NM_001128310	chr4,chr4,chr4	+,-,-	DSPP,SPARCL1,SPARCL1	88584,9609,9609
chr13:73638212-73640065	chr13	+	73638415	73640103	True	NM_001730,NM_014953	chr13,chr13	+,-	KLF5,DIS3	-5330,-282071
chr1:197114655-197115238	chr1	+	197114796	197115262	True	NM_018136,NM_001193640	chr1,chr1	-,+	ASPM,CRB1	612,122071
chr14:96128665-96130292	chr14	+	96128696	96130080	True	NM_001098725,NR_028288	chr14,chr14	-,+	TCL1A,TCL6	50510,-11232
chr10:74934054-74935147	chr10	+	74934108	74934799	True	NR_024203,NM_173348,NM_007265,NM_001135752,NM_001135753	chr10,chr10,chr10,chr10,chr10	-,+,-,-,-	ECD,FAM149B1,ECD,ECD,ECD	-6255,-6292,-6255,-6255,-6255
chr10:64033437-64033840	chr10	+	64033562	64033887	True	NM_014951,NM_145307	chr10,chr10	+,-	ZNF365,RTKN2	100028,-5096
chrX:102884149-102884475	chrX	+	102884159	102884495	True	NM_004780,NM_001142418,NM_001006640,NM_001006639	chrX,chrX,chrX,chrX	+,-,+,+	TCEAL1,MORF4L2,TCEAL1,TCEAL1	-326,57301,-570,-326
chr4:103749462-103751000	chr4	+	103749594	103750833	True	NM_001008388,NM_003340,NM_181887,NM_181886,NM_181892,NM_181889,NM_181888,NM_181891	chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4	+,-,-,-,-,-,-,-	CISD2,UBE2D3,UBE2D3,UBE2D3,UBE2D3,UBE2D3,UBE2D3,UBE2D3	39301,-489,-886,-489,-1254,-287,-489,-886
chr10:120923406-120924404	chr10	+	120923663	120924432	True	NM_005308,NM_213649	chr10,chr10	+,-	GRK5,SFXN4	42764,822
chr7:99147028-99148554	chr7	+	99148038	99148378	True	NM_001009958,NM_145111,NM_001009960,NM_138494,NM_001085368,NM_001085367,NM_024061,NM_001083956,NM_001085366	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,-,+,+,+,+,+,+,+	ZNF655,FAM200A,ZNF655,ZNF655,ZNF655,ZNF655,ZNF655,ZNF655,ZNF655	8069,1429,8069,7666,8069,8069,7666,7666,7666
chr3:122266235-122267908	chr3	+	122266756	122267821	True	NM_138287,NM_001146102	chr3,chr3	+,-	DTX3L,PARP9	15363,15383
chr7:135435171-135436331	chr7	+	135435496	135436381	True	NM_205855,NM_001130929	chr7,chr7	-,+	FAM180A,PL-5283	-1902,-88333
chr3:63263822-63264025	chr3	+	63263824	63264062	True	NM_001130003,NM_183394	chr3,chr3	+,-	SYNPR,CADPS	27,-402760
chr5:157072882-157073954	chr5	+	157073237	157073834	True	NM_178424,NM_007017,NM_001145132	chr5,chr5,chr5	-,-,+	SOX30,SOX30,C5orf52	5644,5644,24726
chr6:139614319-139615847	chr6	+	139614666	139615786	True	NM_153235,NM_016217	chr6,chr6	-,+	TXLNB,HECA	-1458,-158475
chr19:2473987-2474525	chr19	+	2474348	2474426	True	NM_032737,NM_015675	chr19,chr19	-,+	LMNB2,GADD45B	-17390,1696
chr1:182806507-182807715	chr1	+	182806739	182807565	True	NM_030933,NM_001357,NR_033302	chr1,chr1,chr1	-,+,+	SHCBP1L,DHX9,DHX9	115038,873,873
chr6:165533404-165534585	chr6	+	165533482	165534611	True	NM_144980,NR_027284	chr6,chr6	-,+	C6orf118,LOC441177	188551,866427
chrX:134954707-134955551	chrX	+	134954799	134955390	True	NM_001007551,NM_018666,NM_001172288	chrX,chrX,chrX	-,+,-	CT45A5,SAGE1,CT45A5	-805,20394,-805
chrX:134954707-134955551	chrX	+	134937544	134938135	False	NM_018666,NM_001017436	chrX,chrX	+,-	SAGE1,CT45A4	37649,-809
chrX:134954707-134955551	chrX	-	134845817	134845873	False	NM_001017417,NM_001017436	chrX,chrX	+,-	CT45A1,CT45A4	1311,90918
chrX:134954707-134955551	chrX	-	134864813	134865402	False	NM_152582,NM_001017436	chrX,chrX	+,+	CT45A2,CT45A4	811,811
chrX:134954707-134955551	chrX	-	134882088	134882677	False	NM_001017436,NM_001017435	chrX,chrX	-,+	CT45A4,CT45A3	54111,810
chr7:31096269-31096715	chr7	+	31096351	31096691	True	NM_022728,NM_001199635,NM_001199637,NM_001118,NM_001199636	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	NEUROD6,ADCYAP1R1,ADCYAP1R1,ADCYAP1R1,ADCYAP1R1	283897,-4326,-4326,-4326,-4326
chr14:52454089-52456072	chr14	+	52455121	52456036	True	NM_007361,NM_016039	chr14,chr14	-,+	NID2,C14orf166	79967,191
chr9:130853966-130855670	chr9	+	130854104	130855686	True	NM_197956,NM_001006643,NR_033374,NM_052901,NM_001006642	chr9,chr9,chr9,chr9,chr9	-,+,-,+,+	NAIF1,SLC25A25,LOC100289019,SLC25A25,SLC25A25	-24505,5149,25383,5130,-27
chr10:111765111-111766839	chr10	+	111765174	111766811	True	NM_001121,NM_019903,NR_030724,NM_016824	chr10,chr10,chr10,chr10	+,+,-,+	ADD3,ADD3,XPNPEP1,ADD3	899,33,-81863,899
chr5:138861154-138861647	chr5	+	138861186	138861626	True	NM_198282,NM_003339	chr5,chr5	-,+	TMEM173,UBE2D2	767,79124
chrX:70573466-70573911	chrX	+	70573903	70573965	True	NM_001171162,NM_004606	chrX,chrX	-,+	ZMYM3,TAF1	-98856,12148
chr19:46717306-46717578	chr19	+	46717385	46717625	True	NR_027003,NM_207393	chr19,chr19	+,-	DKFZp434J0226,IGFL3	-3937,-89454
chr7:96654830-96655214	chr7	+	96654902	96655169	True	NM_005221,NM_005222	chr7,chr7	-,+	DLX5,DLX6	-759,-19664
chr1:220260751-220261310	chr1	+	220260999	220261140	True	NM_018060,NM_006085	chr1,chr1	+,-	IARS2,BPNT1	6314,2106
chr12:57998302-57998579	chr12	+	57998311	57998616	True	NM_001111270,NM_182947,NM_178502,NM_001478	chr12,chr12,chr12,chr12	+,+,+,-	ARHGEF25,ARHGEF25,DTX3,B4GALNT1	5346,6601,-13,28419
chr15:45491556-45492440	chr15	+	45491680	45492479	True	NM_138356,NM_004212	chr15,chr15	-,+	SHF,SLC28A2	944,51948
chr11:36532280-36532556	chr11	+	36532378	36532548	True	NM_145803,NM_000448,NM_004620	chr11,chr11,chr11	-,+,-	TRAF6,RAG1,TRAF6	-556,57014,-556
chr16:19422495-19422855	chr16	+	19422540	19422896	True	NM_001105249,NM_001105248,NM_016641	chr16,chr16,chr16	+,+,-	TMC5,TMC5,GDE1	-534,-534,110606
chr18:53668492-53670064	chr18	+	53668590	53669734	True	NM_003199,NM_015285	chr18,chr18	-,+	TCF4,WDR7	-412730,648881
chr16:76429454-76429784	chr16	+	76429542	76429612	True	NM_138994,NM_005548	chr16,chr16	+,-	CNTNAP4,KARS	-85865,-747957
chr15:79237559-79238895	chr15	+	79237576	79238867	True	NM_004390,NM_206839	chr15,chr15	-,+	CTSH,MORF4L1	-156,-72455
chr9:139248176-139248445	chr9	+	139248222	139248292	True	NM_001200003,NM_001145639,NM_001080849	chr9,chr9,chr9	+,+,-	GPSM1,GPSM1,DNLZ	959,-764,9999
chr2:163699163-163699374	chr2	+	163699209	163699295	True	NM_033272,NM_012198,NM_173162	chr2,chr2,chr2	-,+,-	KCNH7,GCA,KCNH7	-3952,-498678,-3952
chr9:130520233-130521982	chr9	+	130520579	130521855	True	NM_001142532,NM_001142533,NM_001142531,NM_001142534,NR_036055	chr9,chr9,chr9,chr9,chr9	-,-,-,-,+	SH2D3C,SH2D3C,SH2D3C,SH2D3C,MIR2861	2892,-2996,2914,-3018,26341
chr17:48942387-48942648	chr17	+	48942387	48942685	True	NM_005749,NM_175575	chr17,chr17	-,+	TOB1,WFIKKN2	-974,-29833
chr19:29387206-29387656	chr19	+	29387206	29387680	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	68357,316506
chr1:19537459-19538092	chr1	+	19537495	19538125	True	NM_020765,NM_016183	chr1,chr1	-,+	UBR4,MRTO4	-749,39949
chr1:156699581-156700235	chr1	+	156699580	156700190	True	NM_001142560,NM_015997,NM_030980	chr1,chr1,chr1	+,+,-	RRNAD1,RRNAD1,ISG20L2	-1368,-1368,-1875
chr7:101005090-101006056	chr7	+	101005137	101005951	True	NM_022777,NM_133457	chr7,chr7	-,+	RABL5,EMID2	-40044,170
chr19:19313291-19313925	chr19	+	19313425	19313905	True	NM_176880,NM_004386	chr19,chr19	-,+	NR2C2AP,NCAN	383,8876
chr10:29927317-29928222	chr10	+	29927492	29928036	True	NM_021738,NR_003930	chr10,chr10	-,+	SVIL,LOC387647	-3591,-229050
chr4:52918243-52918766	chr4	+	52918437	52918777	True	NM_145263,NM_000232	chr4,chr4	+,-	SPATA18,SGCB	-895,-13952
chr19:41283894-41284118	chr19	+	41283914	41284118	True	NR_037791,NM_198476,NM_016154,NR_037775,NM_001202553,NM_006533	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+	RAB4B-EGLN2,C19orf54,RAB4B,MIA-RAB4B,MIA,MIA	5,-28086,5,-2523,-2883,-2683
chr4:13485266-13485553	chr4	+	13485272	13485560	True	NM_004249,NM_001017979,NM_001159601,NR_003132	chr4,chr4,chr4,chr4	-,-,-,+	RAB28,RAB28,RAB28,HSP90AB2P	479,479,479,-150286
chr9:12769775-12771310	chr9	+	12770037	12771262	True	NM_203403,NM_003829	chr9,chr9	+,-	C9orf150,MPDZ	3749,479153
chr1:232653159-232653648	chr1	+	232653171	232653398	True	NM_020808,NM_019090	chr1,chr1	-,+	SIPA1L2,KIAA1383	-1928,287239
chr7:44226583-44227642	chr7	+	44226617	44227543	True	NM_006555,NM_000162	chr7,chr7	+,-	YKT6,GCK	13034,1529
chr20:5591076-5591322	chr20	+	5591144	5591322	True	NM_019593,NR_029405	chr20,chr20	-,+	GPCPD1,LOC643406	400,-139353
chr2:744633-746199	chr2	+	744643	746234	True	NM_018968,NM_152834	chr2,chr2	+,-	SNTG2,TMEM18	200319,-67204
chr5:138773927-138774692	chr5	+	138774184	138774554	True	NM_001033112,NM_152686	chr5,chr5	+,-	PAIP2,DNAJC18	-96110,716
chr8:26242183-26242589	chr8	+	26242186	26242638	True	NM_007257,NM_004331	chr8,chr8	-,+	PNMA2,BNIP3L	128895,-1714
chr12:20853811-20855576	chr12	+	20853833	20855611	True	NM_001145946,NM_001145944,NM_001145945,NM_021094,NM_017435	chr12,chr12,chr12,chr12,chr12	+,+,+,-,+	SLCO1C1,SLCO1C1,SLCO1C1,SLCO1A2,SLCO1C1	-5606,-5496,-5606,632272,-5496
chr11:5143020-5143689	chr11	+	5143055	5143627	True	NM_001001916,NM_001005222	chr11,chr11	+,-	OR52J3,OR52A4	-75350,-208
chr19:34745503-34745708	chr19	+	34745683	34745749	True	NR_027620,NM_014686	chr19,chr19	-,+	LOC643719,KIAA0355	322897,-278
chr9:79074623-79075063	chr9	+	79074655	79075105	True	NM_018339,NM_001490,NM_001097633	chr9,chr9,chr9	-,+,+	RFK,GCNT1,GCNT1	-65211,-647,-647
chr11:2467482-2468209	chr11	+	2467650	2468196	True	NM_000218,NM_014555	chr11,chr11	+,-	KCNQ1,TRPM5	-1480,-23375
chr1:115236759-115238211	chr1	+	115236960	115238104	True	NM_000036,NM_003176,NM_001172626	chr1,chr1,chr1	-,+,-	AMPD1,SYCP1,AMPD1	186,159350,186
chr9:2015502-2015935	chr9	+	2015528	2015818	True	NM_139045,NR_015375,NM_003070	chr9,chr9,chr9	+,-,+	SMARCA2,FLJ35024,SMARCA2	-237,606605,-237
chr19:40732760-40732969	chr19	+	40732771	40732975	True	NM_002446,NM_152479,NM_024877	chr19,chr19,chr19	+,-,-	MAP3K10,TTC9B,CNTD2	-35171,-8465,-174
chr4:122135405-122135697	chr4	+	122135405	122135711	True	NR_024365,NM_001128843	chr4,chr4	+,-	LOC100192379,TNIP3	550028,1994
chr1:33348063-33348729	chr1	+	33348259	33348343	True	NM_001171941,NM_002143	chr1,chr1	-,+	FNDC5,HPCA	-10177,3754
chr19:13050121-13051141	chr19	+	13050174	13051128	True	NM_004461,NM_005053,NM_004343	chr19,chr19,chr19	-,+,+	FARSA,RAD23A,CALR	-5616,5525,-811
chr15:71457802-71459028	chr15	+	71457905	71459083	True	NM_024817,NM_001102658	chr15,chr15	+,-	THSD4,CT62	-24168,-50066
chr19:8513452-8514510	chr19	+	8513740	8514350	True	NM_032152,NM_005968,NM_031203	chr19,chr19,chr19	-,+,+	PRAM1,HNRNPM,HNRNPM	53238,-3989,-3989
chr15:76138029-76138737	chr15	+	76138043	76138486	True	NM_001145335,NM_173469,NR_036198	chr15,chr15,chr15	+,+,-	UBE2Q2,UBE2Q2,MIR4313	-1709,-2472,-83387
chr5:112823306-112823506	chr5	+	112823333	112823505	True	NM_001085377,NM_022828	chr5,chr5	-,+	MCC,YTHDC2	1072,25885
chr5:21459489-21459809	chr6	-	58287683	58287733	True	NM_000947,NR_003660	chr6,chr6	+,-	PRIM2,GUSBP4	-1105312,41
chr2:23642326-23642943	chr2	+	23642373	23642903	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	507081,-34126
chr17:48243391-48243673	chr17	+	48243396	48243722	True	NR_024192,NR_024193,NM_001135697,NM_000023	chr17,chr17,chr17,chr17	-,-,+,+	HILS1,HILS1,SGCA,SGCA	6165,6165,-81,-81
chr22:25433212-25434462	chr22	+	25433417	25434477	True	NM_001001663,NM_001145206	chr22,chr22	-,+	TMEM211,KIAA1671	-98103,-9528
chr19:44576293-44576519	chr19	+	44576303	44576501	True	NM_001037813,NR_033341	chr19,chr19	+,-	ZNF284,LOC100379224	-57,40885
chrX:30671861-30672579	chrX	+	30671935	30672431	True	NM_203391,NM_000167,NM_001205019,NM_025159,NM_001128127	chrX,chrX,chrX,chrX,chrX	+,+,+,-,+	GK,GK,GK,CXorf21,GK	-510,-510,-510,-75902,-510
chr7:72993239-72993763	chr7	+	72993428	72993802	True	NM_001077621,NM_012453	chr7,chr7	+,-	VPS37D,TBL2	88371,-415
chrX:48915606-48916464	chrX	+	48915612	48916408	True	NM_033626,NM_001163322,NM_001163323,NM_001163321,NM_007213,NM_006521	chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,-,-	CCDC120,CCDC120,CCDC120,CCDC120,PRAF2,TFE3	107,107,114,114,15304,-14622
chr22:30663796-30664058	chr22	+	30663829	30663931	True	NM_020530,NM_001017437	chr22,chr22	-,+	OSM,CCDC157	-1000,88695
chr3:119922630-119923253	chr3	+	119922641	119923215	True	NM_001168271,NM_001168331	chr3,chr3	-,+	GPR156,NDUFB4	39977,391912
chr4:177145544-177146899	chr4	+	177145952	177146692	True	NM_144644,NM_021928	chr4,chr4	-,+	SPATA4,SPCS3	-29130,94397
chr5:118784868-118786295	chr5	+	118784995	118786099	True	NM_173666,NM_000414,NM_001199292,NM_001199291	chr5,chr5,chr5,chr5	-,+,+,+	DTWD2,HSD17B4,HSD17B4,HSD17B4	-460755,2038,2038,2102
chr6:83072056-83072571	chr6	+	83072145	83072604	True	NM_001166392,NM_006670,NM_015525	chr6,chr6,chr6	+,+,-	TPBG,TPBG,IBTK	1356,318,-114697
chr17:40611698-40612048	chr17	+	40611705	40612089	True	NM_001130021,NM_001130020,NM_005177,NM_012232	chr17,chr17,chr17,chr17	+,+,+,-	ATP6V0A1,ATP6V0A1,ATP6V0A1,PTRF	-907,-907,-907,-36367
chr1:150734838-150736805	chr1	+	150735396	150736500	True	NM_001145415,NM_001199739,NM_004079	chr1,chr1,chr1	+,-,-	SETDB1,CTSS,CTSS	162314,1983,1983
chr10:124907200-124907407	chr10	+	124907276	124907432	True	NM_001007793,NM_004725,NM_022466,NM_005519	chr10,chr10,chr10,chr10	+,+,-,+	BUB3,BUB3,IKZF5,HMX2	6327,6327,-138965,205
chr1:32828712-32829376	chr1	+	32828850	32829304	True	NM_052841,NM_001167676	chr1,chr1	+,-	TSSK3,LOC100128071	-1039,-1006
chr17:79346424-79347552	chr17	+	79346575	79347427	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	26112,-42101
chr6:144000697-144000912	chr6	+	144000697	144000969	True	NM_001100165,NM_001100164,NR_027113	chr6,chr6,chr6	+,+,-	PHACTR2,PHACTR2,LOC285740	-1654,-1654,-110221
chr22:30754038-30754285	chr22	+	30754204	30754328	True	NM_001005409,NM_005877,NM_001017437	chr22,chr22,chr22	-,-,+	SF3A1,SF3A1,CCDC157	-1291,-1291,-1643
chr19:47974127-47974597	chr19	+	47974262	47974572	True	NM_014681,NM_015063	chr19,chr19	+,-	DHX34,SLC8A2	-121775,785
chr17:29295699-29296515	chr17	+	29295715	29296495	True	NM_001184992,NM_197939,NM_024683,NM_032322,NR_002221	chr17,chr17,chr17,chr17,chr17	+,+,-,+,+	RNF135,RNF135,C17orf42,RNF135,DPRXP4	1460,1460,-62429,1460,5857
chr14:105195556-105196521	chr14	+	105195761	105196541	True	NM_199165,NM_005163,NM_152328	chr14,chr14,chr14	+,-,+	ADSSL1,AKT1,ADSSL1	-166,63447,-5278
chr22:25382009-25383296	chr22	+	25382032	25383051	True	NM_001001663,NM_001145206	chr22,chr22	-,+	TMEM211,KIAA1671	-46718,40889
chr12:53038131-53039136	chr12	+	53038134	53038858	True	NM_199187,NM_000423	chr12,chr12	+,-	KRT18,KRT2	303796,7151
chr4:90229287-90230125	chr4	+	90229433	90229969	True	NM_145715,NM_198281	chr4,chr4	+,-	TIGD2,GPRIN3	-195516,-272
chr6:26031747-26032155	chr6	+	26031852	26032134	True	NM_003537,NM_003544,NM_003538,NM_003513	chr6,chr6,chr6,chr6	-,-,+,-	HIST1H3B,HIST1H4B,HIST1H4A,HIST1H2AB	204,-4372,-9996,1712
chr5:96038914-96039279	chr5	+	96038980	96039300	True	NM_173060,NM_016442	chr5,chr5	+,-	CAST,ERAP1	-538,104642
chr1:235814007-235815757	chr1	+	235814156	235815108	True	NM_003193,NM_004485,NM_001098721,NM_001098722	chr1,chr1,chr1,chr1	+,-,-,-	TBCE,GNG4,GNG4,GNG4	-283486,-102,-102,-863
chr15:43777495-43778428	chr15	+	43778070	43778274	True	NM_002373,NM_001141980,NM_001141979	chr15,chr15,chr15	+,-,-	MAP1A,TP53BP1,TP53BP1	31531,7134,7134
chrX:67645408-67646617	chrX	+	67645440	67646375	True	NM_002547,NM_001195214	chrX,chrX	-,+	OPHN1,YIPF6	6986,72248
chr6:24864480-24865573	chr6	+	24864633	24865565	True	NM_015864,NM_015895	chr6,chr6	-,+	FAM65B,GMNN	12068,-89520
chr9:101579197-101579867	chr9	+	101579550	101579631	True	NM_173551,NM_024642	chr9,chr9	-,+	ANKS6,GALNT12	-20756,-9620
chr17:39522932-39523781	chr17	+	39523001	39523655	True	NM_030975,NM_002279	chr17,chr17	+,-	KRTAP9-9,KRT33B	-111417,2448
chr22:25004206-25004430	chr22	+	25004340	25004416	True	NM_005265,NM_207644,NM_001032365,NM_001032364	chr22,chr22,chr22,chr22	+,-,+,+	GGT1,C22orf36,GGT1,GGT1	-5211,-15305,-765,-5267
chr17:6347719-6348017	chr17	+	6347727	6347841	True	NM_019013,NM_014336,NM_001033054,NM_001195228,NM_001033055	chr17,chr17,chr17,chr17,chr17	+,-,-,+,-	FAM64A,AIPL1,AIPL1,FAM64A,AIPL1	-43,-9208,-9208,-43,-9208
chr12:110434222-110434736	chr12	+	110434255	110434565	True	NM_057169,NM_014776,NM_033121,NM_057170,NM_001135213,NM_139201,NM_001135214	chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,-,+,-,-,-,-	GIT2,GIT2,ANKRD13A,GIT2,GIT2,GIT2,GIT2	-61,-61,2669,-61,-61,-61,-61
chr12:48509011-48510486	chr12	+	48509604	48510256	True	NM_000289,NM_001166688,NM_014554,NM_001166687	chr12,chr12,chr12,chr12	+,+,-,+	PFKM,PFKM,SENP1,PFKM	2756,6173,-9963,6173
chr2:238497521-238498832	chr2	+	238498035	238498758	True	NM_015893,NM_022449,NR_033308	chr2,chr2,chr2	+,-,-	PRLH,RAB17,RAB17	-22878,1070,1070
chr9:139269186-139269766	chr9	+	139269230	139269666	True	NM_052813,NM_001200003,NM_052814	chr9,chr9,chr9	-,+,-	CARD9,GPSM1,CARD9	-1097,-20029,-1097
chr6:42713093-42713330	chr6	+	42713124	42713226	True	NM_003192,NR_037141	chr6,chr6	-,+	TBCC,LOC442211	708,-17861
chr19:4790956-4791259	chr19	+	4791172	4791234	True	NM_182919,NM_018708	chr19,chr19	-,+	TICAM1,FEM1A	40553,493
chr17:38185190-38186030	chr17	+	38185297	38186051	True	NR_003692,NM_001079518	chr17,chr17	+,-	SNORD124,MED24	-1564,24888
chr6:27840768-27841386	chr6	+	27840811	27841387	True	NM_003546,NM_003511,NM_003533,NM_005322	chr6,chr6,chr6,chr6	-,+,-,-	HIST1H4L,HIST1H2AL,HIST1H3I,HIST1H1B	-48,-7755,-712,-5452
chr7:72721836-72722470	chr7	+	72721843	72722343	True	NM_148956,NM_001168348,NM_018044,NM_001135211,NM_001168347	chr7,chr7,chr7,chr7,chr7	-,-,-,+,-	NSUN5,NSUN5,NSUN5,FKBP6,NSUN5	571,571,571,19811,571
chr19:49196961-49197595	chr19	+	49197005	49197483	True	NM_145807,NM_001097638,NM_000511	chr19,chr19,chr19	-,+,+	NTN5,FUT2,FUT2	-20741,1744,1744
chr5:110285851-110286189	chr5	+	110286054	110286226	True	NM_033035,NM_001039763	chr5,chr5	+,-	TSLP,TMEM232	121163,-223604
chr2:132250607-132250821	chr2	+	132250619	132250687	True	NM_001085365,NR_026922	chr2,chr2	-,+	MZT2A,LOC150776	-555,-284
chr9:35829599-35829993	chr9	+	35829779	35829923	True	NM_001042589,NM_016446,NM_001042590,NM_001012446	chr9,chr9,chr9,chr9	+,+,+,-	TMEM8B,TMEM8B,TMEM8B,C9orf128	-601,-608,-317,-1035
chr18:3445442-3446340	chr18	+	3445780	3446183	True	NM_019856,NM_173211,NM_173210,NM_173208,NM_170695,NM_003244,NM_173209,NM_173207	chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18	-,+,+,+,+,+,+,+	MYOM1,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1	-225674,7588,5407,3847,5407,3988,3789,1424
chr1:40631616-40632512	chr1	+	40631648	40631963	True	NM_001142604,NM_012421	chr1,chr1	-,+	PPT1,RLF	-68506,-4669
chr1:205411288-205411646	chr1	+	205411491	205411625	True	NM_002596,NR_029893	chr1,chr1	+,-	CDK18,MIR135B	62058,5951
chr17:60124586-60125285	chr17	+	60125224	60125338	True	NM_001144933,NM_005121	chr17,chr17	+,-	EFCAB3,MED13	322240,17359
chr2:190556533-190557673	chr2	+	190556969	190557693	True	NM_144708,NM_022353	chr2,chr2	+,-	ANKAR,OSGEPL1	-16320,70293
chr2:96971317-96971525	chr2	+	96971363	96971503	True	NM_014014,NM_001008949	chr2,chr2	-,+	SNRNP200,ITPRIPL1	-56,19558
chr2:176982039-176982347	chr2	+	176982071	176982325	True	NM_002148,NM_014213,NM_001080458	chr2,chr2,chr2	+,+,-	HOXD10,HOXD9,EVX2	-630,5087,-33381
chr16:3332497-3332845	chr16	+	3332681	3332765	True	NM_005741,NM_033208	chr16,chr16	+,-	ZNF263,TIGD7	721,22724
chr2:20249989-20250458	chr2	+	20250029	20250435	True	NM_014713,NR_033875	chr2,chr2	-,+	LAPTM4A,FLJ12334	1412,-181473
chr11:64571170-64571388	chr11	+	64571232	64571369	True	NM_004579,NM_006244,NM_130799,NM_000244,NM_130804,NM_130803,NM_130802,NM_130801,NM_130800	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,+,-,-,-,-,-,-,-	MAP4K2,PPP2R5B,MEN1,MEN1,MEN1,MEN1,MEN1,MEN1,MEN1	-519,120773,6870,6870,7448,7448,6895,6717,6717
chr15:44116919-44117598	chr15	+	44116923	44117297	True	NM_005926,NM_001167941,NM_024908	chr15,chr15,chr15	-,+,+	MFAP1,WDR76,WDR76	28,1814,1814
chr19:3507549-3507761	chr19	+	3507592	3507668	True	NM_031304,NM_016263,NM_001145165	chr19,chr19,chr19	-,+,-	DOHH,FZR1,DOHH	-6971,-1348,-6654
chr19:17325108-17325559	chr19	+	17325244	17325328	True	NM_005234,NM_018467	chr19,chr19	-,+	NR2F6,USE1	30873,826
chr8:145015668-145016305	chr8	+	145015772	145016222	True	NM_000837,NR_030383,NM_201384,NM_201381,NM_201380,NM_201383,NM_201382	chr8,chr8,chr8,chr8,chr8,chr8,chr8	+,-,-,-,-,-,-	GRINA,MIR661,PLEC,PLEC,PLEC,PLEC,PLEC	48003,3275,-2014,2733,8872,520,1938
chr5:140773911-140774219	chr5	+	140773910	140773982	True	NM_018925,NM_018921,NM_003736,NM_032099,NM_032098,NM_032088,NM_032089,NM_005642,NM_014004	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,+,-,+	PCDHGB5,PCDHGA9,PCDHGB4,PCDHGB5,PCDHGB4,PCDHGA8,PCDHGA9,TAF7,PCDHGA8	3712,8537,-6509,3712,-6509,-2478,8537,-73559,-2478
chr3:197356133-197356548	chr3	+	197356257	197356543	True	NR_003266,NM_001011537	chr3,chr3	-,+	LOC220729,FYTTD1	-1505,119880
chr3:197356133-197356548	chr3	-	195383378	195383428	False	NM_001647,NR_003265	chr3,chr3	-,+	APOD,SDHAP2	-72302,1481
chr3:197356133-197356548	chr3	+	195718674	195718960	False	NR_034088,NR_003264	chr3,chr3	+,-	LOC401109,SDHAP1	150546,-1524
chr1:160854559-160856543	chr1	+	160854650	160856352	True	NM_002348,NM_017625	chr1,chr1	+,-	LY9,ITLN1	-88780,20
chr15:64456086-64457636	chr15	+	64456142	64457371	True	NM_024798,NM_000942	chr15,chr15	+,-	SNX22,PPIB	-12284,-788
chr6:101849818-101850194	chr6	+	101849927	101850243	True	NM_022091,NM_001166247,NM_021956,NM_175768	chr6,chr6,chr6,chr6	-,+,+,+	ASCC3,GRIK2,GRIK2,GRIK2	-520703,-3117,-3117,-3117
chr5:36067689-36068270	chr5	+	36067738	36068036	True	NM_174914,NM_005983,NM_001168316,NR_031764	chr5,chr5,chr5,chr5	-,+,-,-	UGT3A2,SKP2,UGT3A2,UGT3A2	-715,84152,-715,-715
chr8:16885326-16886839	chr8	+	16885367	16886544	True	NM_181723,NM_019851	chr8,chr8	+,-	EFHA2,FGF20	-671,-25693
chr12:70133617-70135015	chr12	+	70133652	70135040	True	NM_175624,NM_175625,NM_032735,NM_022456,NM_175623	chr12,chr12,chr12,chr12,chr12	+,+,-,+,+	RAB3IP,RAB3IP,BEST3,RAB3IP,RAB3IP	-1072,-523,-40456,-1072,-523
chr5:142056601-142058370	chr5	+	142056629	142058240	True	NM_001135608,NM_000800,NM_033136	chr5,chr5,chr5	+,-,-	ARHGAP26,FGF1,FGF1	92051,7463,7862
chr20:54988147-54988696	chr20	+	54988277	54988467	True	NM_020356,NM_001164114,NM_001164115,NM_001164116,NM_198437	chr20,chr20,chr20,chr20,chr20	+,+,+,+,-	CASS4,CASS4,CASS4,CASS4,AURKA	-1022,-1022,-1022,-1168,-20926
chr22:39897495-39898038	chr22	+	39897558	39897946	True	NM_019008,NM_194326	chr22,chr22	+,-	SMCR7L,RPS19BP1	337,30964
chr4:95135608-95137141	chr4	+	95135782	95137164	True	NM_001128429,NM_020159,NM_001128430,NM_014485	chr4,chr4,chr4,chr4	+,+,+,-	SMARCAD1,SMARCAD1,SMARCAD1,HPGDS	-6829,-6829,-7086,126923
chr14:51026925-51027242	chr14	+	51026965	51027217	True	NM_181598,NM_015915,NM_198794	chr14,chr14,chr14	+,+,-	ATL1,ATL1,MAP4K5	-273,-273,-27589
chr14:23067148-23067359	chr14	+	23067190	23067350	True	NM_022060,NM_001344	chr14,chr14	+,-	ABHD4,DAD1	-94,-9047
chr16:73125032-73126387	chr16	+	73125218	73126342	True	NM_001164766,NR_027756	chr16,chr16	-,+	ZFHX3,HTA	-32684,-95
chr9:134151082-134151356	chr9	+	134151101	134151323	True	NM_032728,NM_033387	chr9,chr9	+,-	PPAPDC3,FAM78A	13757,633
chr15:71140925-71141417	chr15	+	71141077	71141213	True	NM_018357,NM_001199017,NM_197958	chr15,chr15,chr15	-,+,-	LARP6,LRRC49,LARP6	5339,43714,5339
chr22:36785499-36785884	chr22	+	36785610	36785868	True	NM_145343,NM_002473	chr22,chr22	+,-	APOL1,MYH9	-136545,-1547
chr1:172411414-172411648	chr1	+	172411425	172411691	True	NM_153747,NM_002642,NM_139240	chr1,chr1,chr1	-,-,+	PIGC,PIGC,C1orf105	1589,1589,-21648
chr4:24585339-24585586	chr4	+	24585412	24585474	True	NM_001358,NM_003102	chr4,chr4	-,+	DHX15,SOD3	760,211610
chr13:53227027-53227326	chr13	+	53227069	53227220	True	NM_006704,NM_001011705,NM_001130912	chr13,chr13,chr13	+,-,+	SUGT1,LECT1,SUGT1	-295,86777,-295
chr14:75527652-75528524	chr14	+	75528280	75528440	True	NM_203488,NM_001042430,NM_001107,NM_024643	chr14,chr14,chr14,chr14	-,+,-,+	ACYP1,FAM164C,ACYP1,FAM164C	2346,7858,2346,7858
chr1:228330915-228331675	chr1	+	228331047	228331575	True	NM_000858,NM_020435,NM_181465,NM_001159390,NM_001159391	chr1,chr1,chr1,chr1,chr1	+,+,-,+,+	GUK1,GJC2,MRPL55,GUK1,GUK1	-3169,5977,-34034,-3169,828
chr22:46544148-46544556	chr22	+	46544199	46544513	True	NM_018280,NM_001001928,NM_005036	chr22,chr22,chr22	-,+,+	C22orf26,PPARA,PPARA	-94175,1985,1985
chr12:56882638-56883275	chr12	+	56882713	56883207	True	NM_013267,NM_207344	chr12,chr12	-,+	GLS2,SPRYD4	-532,-20467
chr2:205409410-205409821	chr2	+	205409409	205409737	True	NM_057177,NM_203365,NM_152526,NM_205863	chr2,chr2,chr2,chr2	+,-,+,+	PARD3B,RAPH1,PARD3B,PARD3B	778,-1009351,778,778
chr12:4831725-4833036	chr12	+	4831754	4833007	True	NM_006422,NM_017417	chr12,chr12	-,+	AKAP3,GALNT8	-77411,-2053
chr10:103879999-103880228	chr10	+	103880049	103880133	True	NM_001113407,NM_015062,NM_003893	chr10,chr10,chr10	-,+,-	LDB1,PPRC1,LDB1	127,12653,-5326
chr11:70051626-70052753	chr11	+	70051711	70052593	True	NM_003824,NM_005247	chr11,chr11	+,-	FADD,FGF3	-2493,-417519
chr1:28845254-28846378	chr1	+	28845336	28845946	True	NM_001269,NM_001048195,NM_001048194,NR_003077	chr1,chr1,chr1,chr1	+,+,+,-	RCC1,RCC1,RCC1,SNORD99	-642,-642,-642,59438
chr11:82972901-82974090	chr11	+	82972959	82974125	True	NM_182603,NM_021825	chr11,chr11	+,-	ANKRD42,CCDC90B	-67727,23302
chr5:56470366-56471820	chr5	+	56470646	56471858	True	NM_001203246,NM_001127235,NM_022913,NM_152622	chr5,chr5,chr5,chr5	+,+,+,-	GPBP1,GPBP1,GPBP1,MIER3	-923,121,-923,-222692
chr7:1202634-1202880	chr7	+	1202673	1202879	True	NM_182491,NM_001080461	chr7,chr7	-,+	ZFAND2A,UNCX	-2818,69774
chr8:39786219-39787602	chr8	+	39786349	39787454	True	NM_194294,NM_001464	chr8,chr8	+,-	IDO2,ADAM2	5019,-90570
chr10:70170201-70171007	chr10	+	70170341	70171062	True	NM_001042417,NM_021644,NM_017987	chr10,chr10,chr10	-,+,-	RUFY2,HNRNPH3,RUFY2	-3290,-78636,-3395
chr3:52531469-52531860	chr3	+	52531847	52531907	True	NM_015136,NM_001134231	chr3,chr3	+,-	STAB1,NT5DC2	-2542,35936
chrX:98111211-98111995	chrX	+	98111217	98111959	True	NM_022144,NR_024608	chrX,chrX	+,-	TNMD,LOC442459	1727830,1082932
chr10:52385078-52385344	chr10	+	52385135	52385381	True	NM_147156,NM_001079516	chr10,chr10	-,+	SGMS1,ASAH2B	-1398,114326
chr15:34728376-34728822	chr15	+	34728417	34728741	True	NM_175741,NR_027409	chr15,chr15	+,-	C15orf55,GOLGA8A	-90403,980
chr3:155425197-155426792	chr3	+	155425568	155426727	True	NM_003875,NM_014996	chr3,chr3	+,-	GMPS,PLCH1	161597,-3571
chr11:68452701-68452982	chr11	+	68452731	68452981	True	NM_015973,NM_004923	chr11,chr11	+,-	GAL,MTL5	-799,66057
chr1:46215607-46215856	chr1	+	46215729	46215817	True	NM_005897,NM_015112,NM_001145349	chr1,chr1,chr1	-,+,-	IPP,MAST2,IPP	718,53467,718
chr19:12662624-12662961	chr19	+	12662629	12662967	True	NM_153358,NM_144976	chr19,chr19	+,-	ZNF791,ZNF564	58764,-273
chr3:13917294-13918580	chr3	+	13917301	13918598	True	NM_004625,NR_036481	chr3,chr3	-,+	WNT7A,LOC100132526	3071,55954
chr9:15423116-15423616	chr9	+	15423278	15423584	True	NM_021144,NM_001039697	chr9,chr9	-,+	PSIP1,SNAPC3	86753,-547
chr12:121790212-121790431	chr12	+	121790235	121790411	True	NM_001137559,NM_016237,NM_025126	chr12,chr12,chr12	-,-,+	ANAPC5,ANAPC5,RNF34	1651,2,47490
chrX:154111886-154113172	chrX	+	154112015	154112913	True	NR_036049,NM_001007524,NM_001007523,NM_012151,NM_080720,NR_036260,NM_019863,NR_036259,NM_001017990	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,-,-,-,+	MIR1184-1,F8A3,F8A2,F8A1,H2AFB3,MIR1184-3,F8,MIR1184-2,H2AFB1	2871,1736,1736,1721,403,2871,1715,2871,403
chrX:154111886-154113172	chrX	+	154609126	154610024	False	NR_036049,NM_001007524,NM_001007523,NM_012151,NM_080720,NR_036260,NR_036259,NM_001017991,NM_001017990	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,-,-,+,+	MIR1184-1,F8A3,F8A2,F8A1,H2AFB3,MIR1184-3,MIR1184-2,H2AFB2,H2AFB1	2874,1739,1739,1724,403,2874,2874,411,403
chrX:154111886-154113172	chrX	-	154689999	154690897	False	NR_036049,NM_001007524,NM_001007523,NM_012151,NM_080720,NR_036260,NR_036259,NM_001017991,NM_001017990	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,-,-,-,-,+,+,-,-	MIR1184-1,F8A3,F8A2,F8A1,H2AFB3,MIR1184-3,MIR1184-2,H2AFB2,H2AFB1	-2873,-1738,-1738,-1723,-403,-2873,-2873,-411,-403
chr22:19119957-19120286	chr22	+	19120036	19120216	True	NM_053006,NR_033674	chr22,chr22	+,-	TSSK2,DGCR2	-1766,-10069
chr18:12884565-12884803	chr18	+	12884654	12884848	True	NM_001013437,NM_080423,NM_080422,NM_002828	chr18,chr18,chr18,chr18	+,-,-,-	SEH1L,PTPN2,PTPN2,PTPN2	63134,-320,-320,-320
chr1:161358330-161358673	chr1	+	161358434	161358658	True	NM_001013625,NM_003001	chr1,chr1	-,+	C1orf192,SDHC	-20770,-74319
chrX:20162371-20162653	chrX	+	20162599	20162673	True	NR_023358,NM_001173456,NM_001412	chrX,chrX,chrX	-,+,-	SCARNA9L,PDHA1,EIF1AX	-8068,-800646,-2633
chr12:32266896-32268772	chr12	+	32267775	32268759	True	NM_001714,NM_001003398,NM_001013699	chr12,chr12,chr12	+,+,-	BICD1,BICD1,H3F3C	-7641,-7641,-322600
chr6:43443504-43443887	chr6	+	43443544	43443868	True	NM_001146020,NM_206539,NM_080604,NR_027394,NM_001146019,NM_001146018,NM_001146016	chr6,chr6,chr6,chr6,chr6,chr6,chr6	+,-,+,+,+,+,+	TJAP1,DLK2,TJAP1,TJAP1,TJAP1,TJAP1,TJAP1	1392,-19758,1392,1392,1392,1392,1392
chr19:54640691-54641485	chr19	+	54640745	54641323	True	NM_014516,NM_024316,NM_013342	chr19,chr19,chr19	+,-,-	CNOT3,LENG1,TFPT	112,22173,-21690
chr3:126291439-126291694	chr3	+	126291451	126291665	True	NM_152533,NM_152889	chr3,chr3	-,+	C3orf22,CHST13	-13693,-48326
chr19:18285956-18287123	chr19	+	18285988	18286480	True	NM_002866,NM_006332	chr19,chr19	-,+	RAB3A,IFI30	28444,-1460
chr12:26110055-26111152	chr12	+	26110198	26111184	True	NM_001164748,NR_036188,NM_007211	chr12,chr12,chr12	+,-,+	RASSF8,MIR4302,RASSF8	779,-83186,779
chr9:134613518-134613981	chr9	+	134613695	134613951	True	NM_007171,NM_005312	chr9,chr9	+,-	POMT1,RAPGEF1	-235462,-770
chr12:5510160-5510992	chr12	+	5510173	5511024	True	NM_020373,NM_001102654	chr12,chr12	-,+	ANO2,NTF3	544425,30255
chr14:105259824-105260967	chr14	+	105259914	105260874	True	NM_005163,NM_001014432,NM_001014431,NM_001137601	chr14,chr14,chr14,chr14	-,-,-,+	AKT1,AKT1,AKT1,ZBTB42	24,1256,1256,6058
chr12:25346554-25346914	chr12	+	25346625	25346755	True	NM_001001660,NM_001204101,NM_001204102,NM_001082972,NM_001082973,NM_018272	chr12,chr12,chr12,chr12,chr12,chr12	+,-,-,-,-,-	LYRM5,CASC1,CASC1,CASC1,CASC1,CASC1	1394,1389,1389,1389,1389,1389
chr17:79140420-79141065	chr17	+	79140556	79140830	True	NR_027255,NM_001080395	chr17,chr17	+,-	LOC388428,AATK	-1300,-684
chr7:65952994-65954167	chr7	+	65953299	65953969	True	NR_026873,NM_001167961	chr7,chr7	-,+	NCRNA00174,KCTD7	-87904,139898
chr1:6053343-6053639	chr1	+	6053431	6053599	True	NM_001199861,NM_015102	chr1,chr1	+,-	KCNAB2,NPHP4	-1124,-898
chr19:892212-892459	chr19	+	892313	892429	True	NM_005481,NM_032551	chr19,chr19	-,+	MED16,KISS1R	839,24912
chr12:49963817-49964650	chr12	+	49964252	49964568	True	NM_006337,NM_012284,NM_001012300	chr12,chr12,chr12	-,+,-	MCRS1,KCNH3,MCRS1	-2341,-31363,-4030
chr19:33557860-33558376	chr19	+	33558081	33558301	True	NM_033103,NM_018025	chr19,chr19	-,+	RHPN2,GPATCH1	-2257,13484
chr21:46427138-46427886	chr21	+	46427241	46427892	True	NR_024089,NM_001112	chr21,chr21	-,+	NCRNA00162,ADARB1	-2599,66600
chr21:41238610-41239321	chr21	+	41238616	41239243	True	NR_026543,NM_006198	chr21,chr21	-,+	C21orf88,PCP4	-253867,103
chr15:23379825-23380733	chr15	+	23380114	23380324	True	NR_002824,NR_036470	chr15,chr15	-,+	HERC2P2,HERC2P7	-1855,10397
chr15:23379825-23380733	chr15	+	20713322	20713532	False	NR_036432,NR_027411	chr15,chr15	-,+	HERC2P3,GOLGA8C	-1889,54141
chr15:23379825-23380733	chr15	-	28832510	28832720	False	NR_036443,NR_033351	chr15,chr15	+,-	HERC2P9,GOLGA8F	66867,-54367
chr15:23379825-23380733	chr15	+	28569194	28569404	False	NM_004667,NR_033351	chr15,chr15	-,+	HERC2,GOLGA8F	-1899,54379
chr6:42846943-42847337	chr6	+	42846958	42847310	True	NM_001008739,NM_198486	chr6,chr6	-,+	C6orf226,RPL7L1	11294,360
chr6:31091343-31091702	chr6_qbl_hap6	+	2387219	2387279	False	NM_014068,NM_001264	chr6_qbl_hap6,chr6_qbl_hap6	+,-	PSORS1C1,CDSN	-8844,-3146
chr6:31091343-31091702	chr6	+	31091397	31091457	True	NM_014068,NM_001264	chr6,chr6	+,-	PSORS1C1,CDSN	-8840,-3145
chr6:31091343-31091702	chr6_cox_hap2	+	2606103	2606163	False	NM_014068,NM_001264	chr6_cox_hap2,chr6_cox_hap2	+,-	PSORS1C1,CDSN	-8842,-3146
chr11:61099784-61100072	chr11	+	61099784	61100108	True	NM_001923,NM_015533	chr11,chr11	-,+	DDB1,DAK	608,545
chr4:56408483-56409874	chr4	+	56408609	56409682	True	NM_004898,NM_018475	chr4,chr4	-,+	CLOCK,TMEM165	3372,-146583
chr17:42581078-42581951	chr17	+	42581115	42581633	True	NM_001466,NM_001002909,NR_036474	chr17,chr17,chr17	+,-,-	FZD2,GPATCH8,GPATCH8	53178,-158,-158
chr2:241938177-241938456	chr2	+	241938329	241938477	True	NR_033841,NM_001080437	chr2,chr2	-,+	LOC200772,SNED1	-31461,-125
chr1:153507258-153507496	chr1	+	153507266	153507506	True	NM_002962,NM_006271,NM_014624	chr1,chr1,chr1	-,+,-	S100A5,S100A1,S100A6	6785,93366,1261
chr10:7860552-7860809	chr10	+	7860648	7860728	True	NM_012311,NM_031923	chr10,chr10	-,+	KIN,TAF3	-30704,-26
chr21:46089262-46089674	chr21	+	46089457	46089687	True	NM_181684,NM_198697	chr21,chr21	-,+	KRTAP12-2,KRTAP12-3	-2613,-11659
chr2:34185935-34186167	chr2	+	34185937	34186174	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-447054,-232653
chr2:54202284-54202891	chr2	+	54202382	54202688	True	NM_014614,NM_138448	chr2,chr2	-,+	PSME4,ACYP2	-4405,139721
chr6:127584246-127585805	chr6	+	127584298	127585264	True	NM_030963,NM_001139510	chr6,chr6	+,-	RNF146,ECHDC1	2755,78345
chr9:35101706-35102158	chr9	+	35101804	35102178	True	NM_001201484,NM_152850,NM_006377,NM_032634,NM_203299,NM_013442	chr9,chr9,chr9,chr9,chr9,chr9	-,-,+,-,+,-	PIGO,PIGO,UNC13B,PIGO,C9orf131,STOML2	-5258,-5206,59810,-5258,-59632,1026
chrX:49041563-49041834	chrX	+	49041593	49041855	True	NM_002668,NM_006150	chrX,chrX	+,-	PLP2,PRICKLE3	-13460,971
chr17:37382389-37382669	chr17	+	37382427	37382679	True	NM_198993,NM_000981	chr17,chr17	-,+	STAC2,RPL19	-387,-25942
chr2:87756156-87756804	chr2	+	87756182	87756712	True	NM_001078170,NR_024206,NR_024204,NR_024205	chr2,chr2,chr2,chr2	-,+,+,+	RGPD2,NCRNA00152,NCRNA00152,NCRNA00152	368624,-1259,-1259,-1259
chr2:87756156-87756804	chr2	-	112250899	112251289	False	NR_024373,NM_207003,NR_015395	chr2,chr2,chr2	-,+,-	LOC541471,BCL2L11,LOC541471	1459,-372459,1459
chr20:358510-360033	chr20	+	358660	360031	True	NM_021158,NM_144628	chr20,chr20	+,-	TRIB3,TBC1D20	1276,83213
chr4:120549415-120549646	chr4	+	120549482	120549588	True	NM_033437,NM_033430,NR_037630,NM_001083	chr4,chr4,chr4,chr4	-,-,+,-	PDE5A,PDE5A,LOC645513,PDE5A	-243,-1040,-173596,443
chr14:54863869-54864174	chr14	+	54863878	54864156	True	NM_005192,NM_005776,NM_001130851	chr14,chr14,chr14	+,-,+	CDKN3,CNIH,CDKN3	-256,44042,-256
chr14:52535350-52535681	chr14	+	52535471	52535703	True	NM_007361,NM_016039	chr14,chr14	-,+	NID2,C14orf166	293,-79294
chr3:9008305-9010080	chr3	+	9008647	9010021	True	NM_020165,NM_001234	chr3,chr3	-,+	RAD18,CAV3	-3488,-233202
chr9:130658541-130659403	chr9	+	130658626	130659316	True	NM_001018078,NM_013443	chr9,chr9	+,-	FPGS,ST6GALNAC6	-93169,2605
chr7:6050373-6052279	chr7	+	6050379	6052138	True	NM_006303,NR_003085,NM_000535	chr7,chr7,chr7	+,-,-	AIMP2,PMS2,PMS2	-1559,-1642,-1642
chr1:235326359-235327362	chr1	+	235326471	235327188	True	NM_001037277,NM_015014,NR_027762,NM_001161533	chr1,chr1,chr1,chr1	+,-,-,-	GGPS1,RBM34,RBM34,RBM34	164564,-1900,-1900,-1900
chr7:99868623-99869044	chr7	+	99868643	99868982	True	NR_028040,NM_001004351,NR_028039,NR_028038,NM_178831	chr7,chr7,chr7,chr7,chr7	-,+,-,-,-	GATS,SPDYE3,GATS,GATS,GATS	923,36342,923,923,923
chr7:99868623-99869044	chr7	-	72569907	72569957	False	NR_002206,NR_003664,NR_003580	chr7,chr7,chr7	+,-,+	GTF2IP1,SPDYE8P,LOC100093631	-932,-69598,-946
chr7:99868623-99869044	chr7	-	74379672	74379722	False	NM_001025202,NM_001145063	chr7,chr7	-,+	STAG3L2,GATSL1	-72941,-640
chr7:99868623-99869044	chr7	+	74652513	74652563	False	NR_002206,NM_001003795,NR_003580	chr7,chr7,chr7	-,+,-	GTF2IP1,GTF2IRD2B,LOC100093631	932,-144217,946
chr7:99868623-99869044	chr7	+	74866702	74866752	False	NM_001145064,NR_003664	chr7,chr7	-,+	GATSL2,SPDYE8P	639,69780
chr9:116917210-116917700	chr9	+	116917307	116917597	True	NM_138424,NM_032888	chr9,chr9	-,+	KIF12,COL27A1	-55970,633
chr20:4804838-4805541	chr20	+	4804948	4805452	True	NM_012409,NM_170774,NM_014737	chr20,chr20,chr20	+,-,-	PRND,RASSF2,RASSF2	-102443,-9179,-657
chr16:11364312-11365131	chr16	+	11364338	11365100	True	NM_021247,NM_005425,NM_152308,NM_002762	chr16,chr16,chr16,chr16	-,-,+,-	PRM3,TNP2,C16orf75,PRM2	2402,-1178,74210,5287
chr3:148572887-148574321	chr3	+	148572923	148574367	True	NM_001870,NM_003071	chr3,chr3	+,-	CPA3,HLTF	8675,230033
chr20:36977355-36978013	chr20	+	36977487	36977777	True	NM_004139,NR_002910	chr20,chr20	+,-	LBP,SNORA71B	-2663,76251
chr9:90498532-90498979	chr9	+	90498588	90498960	True	NM_001039803,NM_178828	chr9,chr9	-,+	CDK20,C9orf79	90785,-867
chr19:58254655-58255015	chr19	+	58254754	58254929	True	NM_173632,NM_024833	chr19,chr19	+,-	ZNF776,ZNF671	3234,-15759
chr15:25313297-25313778	chr15	+	25313372	25313824	True	NR_003322,NR_003323,NR_003320,NR_003321,NR_003326,NR_003327,NR_003324,NR_003325,NR_003319,NR_003318,NM_130838,NR_003317	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,+,-,+	SNORD116-7,SNORD116-8,SNORD116-5,SNORD116-6,SNORD116-11,SNORD116-12,SNORD116-9,SNORD116-10,SNORD116-4,SNORD116-3,UBE3A,SNORD116-2	-489,1753,-489,-3251,7250,8372,4428,5435,-8739,4428,336879,-3251
chrX:100350474-100351676	chrX	+	100350473	100351441	True	NM_006733,NM_024917	chrX,chrX	+,-	CENPI,TRMT2B	3356,-43368
chr4:86745959-86746949	chr4	+	86746457	86746991	True	NM_001042669,NM_138981	chr4,chr4	+,-	ARHGAP24,MAPK10	-46657,281871
chr6:116692620-116692858	chr6	+	116692748	116692894	True	NM_003309,NM_013352	chr6,chr6	-,+	TSPYL1,DSE	-91468,-689
chr22:41484553-41485494	chr22	+	41484872	41485369	True	NM_138481,NR_031694,NM_001429	chr22,chr22,chr22	-,+,+	CHADL,MIR1281,EP300	151623,3147,3244
chr1:203271559-203272212	chr1	+	203271696	203272185	True	NM_006763,NR_034151,NR_034150	chr1,chr1,chr1	+,-,-	BTG2,LOC730227,LOC730227	2478,2329,2329
chr2:230911026-230911335	chr2	+	230911098	230911334	True	NM_174899,NM_152527	chr2,chr2	+,-	FBXO36,SLC16A14	-123942,22431
chr14:75390468-75390807	chr14	+	75390731	75390805	True	NM_031464,NR_033814	chr14,chr14	-,+	RPS6KL1,DLST	-1586,-42188
chr8:59488198-59489064	chr8	+	59488213	59489116	True	NM_005625,NM_000780	chr8,chr8	+,-	SDCBP,CYP7A1	-22550,-75493
chr6:39012359-39012584	chr6	+	39012451	39012589	True	NM_002062,NM_018322	chr6,chr6	+,-	GLP1R,C6orf64	3967,70326
chr20:895697-896685	chr20	+	895756	896384	True	NM_015985,NM_031424	chr20,chr20	-,+	ANGPT4,FAM110A	626,-70522
chr4:84405208-84406058	chr4	+	84405375	84405958	True	NM_139076,NM_016067	chr4,chr4	-,+	FAM175A,MRPS18C	382,-28308
chr18:70211274-70211506	chr18	+	70211314	70211497	True	NM_014177,NM_182511	chr18,chr18	+,-	C18orf55,CBLN2	1604248,276
chr11:34128848-34129801	chr11	+	34128849	34129821	True	NM_001144030,NM_024662,NM_005574	chr11,chr11,chr11	+,+,-	NAT10,NAT10,LMO2	-1789,-1789,-215013
chr6:14975168-14975511	chr6	+	14975217	14975506	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	271020,687833
chr3:88198084-88198543	chr3	+	88198105	88198551	True	NM_173824,NM_001195308,NM_018293	chr3,chr3,chr3	+,-,+	C3orf38,CGGBP1,ZNF654	341,515,-9907
chr3:197300497-197301382	chr3	+	197300516	197301279	True	NM_203315,NM_001011537	chr3,chr3	-,+	BDH1,FYTTD1	-322,175144
chr19:47777019-47777538	chr19	+	47777025	47777107	True	NR_037675,NM_178511,NM_001127242	chr19,chr19,chr19	+,+,-	PRR24,PRR24,BBC3	551,495,-41002
chr1:17766860-17767328	chr1	+	17766894	17767310	True	NM_001136204,NM_018715,NM_207421	chr1,chr1,chr1	-,-,+	RCC2,RCC2,PADI6	-1837,-674,-68204
chr10:126482490-126482847	chr10	+	126482809	126482883	True	NM_032182,NM_212554	chr10,chr10	+,-	FAM175B,METTL10	7470,-2370
chr3:190122438-190122718	chr3	+	190122550	190122734	True	NM_207316,NM_006580	chr3,chr3	-,+	TMEM207,CLDN16	44981,-16940
chr2:1746511-1747032	chr2	+	1746800	1747080	True	NM_012293,NM_175722	chr2,chr2	-,+	PXDN,TPO	1261,-328671
chr22:39494694-39495054	chr22	+	39494752	39494874	True	NM_001166004,NM_181773,NM_175709,NM_001166002,NM_001166003	chr22,chr22,chr22,chr22,chr22	+,+,-,+,+	APOBEC3H,APOBEC3H,CBX7,APOBEC3H,APOBEC3H	-1574,-1574,53714,-1574,-1574
chr6:52664005-52664561	chr6	+	52664027	52664511	True	NM_145740,NM_014051	chr6,chr6	-,+	GSTA1,TMEM14A	4207,-128194
chr6:52664005-52664561	chr6	+	52735345	52735397	False	NM_033481,NM_153699	chr6,chr6	+,-	FBXO9,GSTA5	194398,-24452
chr12:6642900-6643172	chr12	+	6642905	6643208	True	NM_001039670,NM_002046	chr12,chr12	-,+	IFFO1,GAPDH	22091,448
chr12:1722696-1723611	chr12	+	1723026	1723630	True	NM_030775,NM_152441	chr12,chr12	+,-	WNT5B,FBXL14	2591,-19695
chr19:41427246-41428259	chr19	+	41427271	41428077	True	NM_030589,NR_001278	chr19,chr19	-,+	CYP2A7,CYP2B7P1	-38614,2092
chr8:37402559-37403861	chr8	+	37402769	37403889	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	149411,201725
chr18:24130099-24130413	chr18	+	24130139	24130399	True	NM_001136205,NR_026908,NM_001142730	chr18,chr18,chr18	-,+,-	KCTD1,C18orf16,KCTD1	-740,314872,-1639
chr4:141325406-141326429	chr4	+	141325525	141326178	True	NM_001153663,NM_001130675	chr4,chr4	+,-	SCOC,CLGN	-30912,22691
chr11:130027430-130028441	chr11	+	130027731	130028477	True	NM_199437,NM_021978	chr11,chr11	-,+	PRDM10,ST14	-155001,1204
chr11:63579815-63580291	chr11	+	63580025	63580317	True	NM_138471,NM_001144936	chr11,chr11	+,-	C11orf84,C11orf95	605,-43912
chr3:52101299-52101816	chr3	+	52101442	52101834	True	NM_001198898,NR_027331	chr3,chr3	+,-	ACY1,C3orf74	-84193,-2314
chr2:26780595-26780848	chr2	+	26780654	26780836	True	NM_001105519,NM_194248	chr2,chr2	+,-	C2orf70,OTOF	4644,788
chr16:84272396-84272767	chr16	+	84272518	84272816	True	NM_139174,NM_172347	chr16,chr16	+,-	ADAD2,KCNG4	-47858,590
chr19:16682352-16682656	chr19	+	16682425	16682587	True	NM_024881,NM_032207	chr19,chr19	-,+	SLC35E1,C19orf44	656,-75271
chr2:214281402-214282889	chr2	+	214281415	214282924	True	NM_001079526,NM_024532	chr2,chr2	-,+	IKZF2,SPAG16	-265082,-132357
chr1:180466109-180466403	chr1	+	180466136	180466438	True	NM_001135669,NM_032360	chr1,chr1	+,-	XPR1,ACBD6	134707,5634
chr9:88356924-88357133	chr9	+	88356982	88357042	True	NR_029410,NM_015239	chr9,chr9	+,-	LOC389765,AGTPBP1	63874,-38
chr13:51664920-51665310	chr13	+	51664919	51665359	True	NR_003923,NM_145019	chr13,chr13	-,+	GUCY1B2,FAM124A	-24626,131147
chr2:6641197-6642440	chr2	+	6641298	6642478	True	NM_207315,NM_080657	chr2,chr2	-,+	CMPK2,RSAD2	363510,375317
chr3:52091358-52092249	chr3	+	52091410	52092249	True	NM_001198898,NR_027331,NM_001947	chr3,chr3,chr3	+,-,-	ACY1,C3orf74,DUSP7	-74161,6929,-949
chr9:5514010-5515845	chr9	+	5514137	5515335	True	NM_025239,NM_018465	chr9,chr9	+,-	PDCD1LG2,C9orf46	-3650,-76277
chr21:34165427-34166582	chr21	+	34165723	34166615	True	NM_001162495,NR_024623	chr21,chr21	-,+	C21orf62,C21orf49	19488,-21363
chr12:90022101-90022675	chr12	+	90022288	90022637	True	NM_001001323,NR_028138	chr12,chr12	-,+	ATP2B1,LOC338758	27264,80094
chrX:50061367-50061745	chrX	+	50061661	50061743	True	NM_003886,NM_033670	chrX,chrX	-,+	AKAP4,CCNB3	-95997,-34178
chr9:130525716-130526275	chr9	+	130525815	130526163	True	NM_001142532,NM_001142533,NM_001142531,NM_001142534,NR_036055,NM_005489	chr9,chr9,chr9,chr9,chr9,chr9	-,-,-,-,+,-	SH2D3C,SH2D3C,SH2D3C,SH2D3C,MIR2861,SH2D3C	-1118,-8232,-1096,-8254,22033,7508
chr14:23449747-23449993	chr14	+	23449757	23449827	True	NM_001099780,NM_198086,NM_032876	chr14,chr14,chr14	+,-,-	PSMB11,JUB,JUB	61548,-3325,2071
chr11:95034755-95035081	chr11	+	95034781	95034958	True	NM_144665,NM_015036	chr11,chr11	-,+	SESN3,ENDOD1	-70535,-211858
chr8:38761771-38763495	chr8	+	38762063	38763047	True	NM_021623,NM_001024380	chr8,chr8	+,-	PLEKHA2,TM2D2	-3361,91044
chr1:12289613-12289995	chr1	+	12289652	12289898	True	NM_138346,NM_018156,NM_015378	chr1,chr1,chr1	-,+,+	KIAA2013,VPS13D,VPS13D	-303167,214,214
chr3:36422476-36424003	chr3	+	36422521	36423820	True	NM_003149,NM_033403	chr3,chr3	+,-	STAC,DCLK3	-475,357582
chr11:98984329-98985934	chr11	+	98984464	98985659	True	NM_175566,NM_001202474	chr11,chr11	+,-	CNTN5,PGR	-92644,2014185
chr16:4000137-4000550	chr16	+	4000142	4000586	True	NM_005223,NM_004380	chr16,chr16	+,-	DNASE1,CREBBP	-297257,-70021
chr12:6311627-6312800	chr12	+	6311631	6312837	True	NM_001769,NM_000552	chr12,chr12	+,-	CD9,VWF	-2200,-77795
chr15:90434813-90435623	chr15	+	90435027	90435461	True	NR_023361,NM_005829,NM_198526,NR_037582	chr15,chr15,chr15,chr15	-,-,+,-	AP3S2,AP3S2,ZNF710,AP3S2	2206,2206,109290,2206
chr14:100149302-100149600	chr14	+	100149359	100149592	True	NM_001144995,NM_006668	chr14,chr14	-,+	CCDC85C,CYP46A1	-78632,1162
chr16:2734460-2735146	chr16	+	2735010	2735145	True	NM_031948,NM_018992	chr16,chr16	-,+	PRSS27,KCTD5	35460,-2576
chr16:2734460-2735146	chr16	+	2655832	2655897	False	NR_036139,NR_015441	chr16,chr16	-,+	MIR3178,LOC652276	-73826,-2511
chr15:65910970-65911823	chr15	+	65911064	65911868	True	NM_030800,NM_001136043,NM_004727	chr15,chr15,chr15	-,-,+	C15orf44,C15orf44,SLC24A1	-7657,-7595,2401
chr1:44679189-44679397	chr1	+	44679200	44679408	True	NM_019100,NM_001034023,NM_001034024,NM_024066	chr1,chr1,chr1,chr1	+,+,+,-	DMAP1,DMAP1,DMAP1,ERI3	-126,-126,-126,141581
chr1:40559411-40560923	chr1	+	40559838	40560865	True	NM_001142604,NM_006367,NM_000310	chr1,chr1,chr1	-,+,-	PPT1,CAP1,PPT1	2334,-53634,2334
chr16:27562264-27562927	chr16	+	27562285	27562801	True	NM_015202,NM_001520	chr16,chr16	+,-	KIAA0556,GTF3C1	-868,-1034
chr1:248099940-248100188	chr1	+	248099944	248100202	True	NM_175911,NM_001001959	chr1,chr1	+,-	OR2L13,OR11L1	290,-94746
chr10:90772548-90772905	chr10	+	90772547	90772949	True	NR_028036,NR_028371	chr10,chr10	+,-	FAS,FAS-AS1	-22321,-19815
chrX:153190239-153191195	chrX	+	153190307	153191089	True	NM_001164741,NM_001146151,NM_001666,NM_003491	chrX,chrX,chrX,chrX	-,+,-,-	ARHGAP4,AVPR2,ARHGAP4,NAA10	675,-19829,675,9429
chr12:52352653-52353923	chr12	+	52352725	52353856	True	NM_020328,NM_001013690,NM_004302,NM_020327	chr12,chr12,chr12,chr12	+,-,+,+	ACVR1B,FIGNL2,ACVR1B,ACVR1B	-7334,-127024,-7334,-5621
chr11:93584555-93585106	chr11	+	93584649	93585100	True	NM_001144871,NM_004268	chr11,chr11	-,+	C11orf90,MED17	-981,-67295
chr19:50935806-50936091	chr19	+	50935808	50936130	True	NM_004533,NM_138411	chr19,chr19	+,-	MYBPC2,FAM71E1	29,43923
chr8:30243012-30244979	chr8	+	30243284	30245000	True	NM_001100916,NM_006867,NM_001008712,NM_001008711,NM_001008710	chr8,chr8,chr8,chr8,chr8	-,+,+,+,+	MBOAT4,RBPMS,RBPMS,RBPMS,RBPMS	-241084,-1394,-1394,-1394,-1394
chr8:143850001-143850410	chr8	+	143850045	143850291	True	NM_177477,NM_177476,NM_177457,NM_177458,NM_016647,NM_023946	chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,+,-	LYNX1,LYNX1,LYNX1,LYNX1,C8orf55,LYNX1	8503,8196,9399,1005,-41475,9398
chr6:168225918-168226468	chr6	+	168226075	168226445	True	NR_027906,NM_001040000	chr6,chr6	-,+	C6orf124,MLLT4	1081,1225
chr7:149192547-149193522	chr7	+	149192646	149193540	True	NR_036573,NM_001163474,NM_152557	chr7,chr7,chr7	+,-,-	LOC155060,ZNF746,ZNF746	-210325,1408,1408
chr15:42563306-42565104	chr15	+	42563488	42565030	True	NM_198141,NM_015497,NM_001110503	chr15,chr15,chr15	+,-,-	GANC,TMEM87A,TMEM87A	1335,775,775
chr2:64679814-64680251	chr2	+	64679816	64680238	True	NM_014755,NM_014181	chr2,chr2	-,+	SERTAD2,HSPC159	200858,1088
chr21:39657735-39659605	chr21	+	39657735	39659637	True	NM_005867,NM_170737	chr21,chr21	-,+	DSCR4,KCNJ15	-164281,-13364
chr3:52803090-52804128	chr3	+	52803323	52804094	True	NM_003157,NM_001193533,NM_001166435,NM_001166434,NM_001166436,NM_002215	chr3,chr3,chr3,chr3,chr3,chr3	-,-,+,+,+,+	NEK4,NEK4,ITIH1,ITIH1,ITIH1,ITIH1	928,928,9842,8428,9842,7513
chr3:128294155-128294452	chr3	+	128294314	128294402	True	NM_007354,NR_026954	chr3,chr3	-,+	C3orf27,LOC90246	577,-67688
chr1:27308351-27308707	chr1	+	27308355	27308493	True	NM_152365,NM_001013642	chr1,chr1	-,+	C1orf172,TRNP1	-21454,11701
chr10:105239140-105239979	chr10	+	105239151	105239857	True	NM_001129742,NM_004210	chr10,chr10	-,+	CALHM3,NEURL	-154,13877
chr5:110579689-110580413	chr5	+	110579694	110580235	True	NM_001744,NM_139164	chr5,chr5	+,-	CAMK4,STARD4	-19799,267983
chr14:21754415-21755411	chr14	+	21754498	21755046	True	NM_020366,NM_031314	chr14,chr14	+,-	RPGRIP1,HNRNPC	1089,-16860
chr1:205195625-205197000	chr1	+	205195696	205196777	True	NM_014858,NM_199462	chr1,chr1	+,-	TMCC2,DSTYK	260,-14969
chr1:44410322-44411208	chr1	+	44410345	44410963	True	NM_014652,NM_006934	chr1,chr1	+,-	IPO13,SLC6A9	1514,72090
chr14:62298117-62299124	chr14	+	62298271	62299037	True	NM_001017970,NM_003082	chr14,chr14	-,+	TMEM30B,SNAPC1	-549741,-69250
chr20:30713765-30714696	chr20	+	30713780	30714411	True	NR_002781,NM_014742	chr20,chr20	-,+	TSPY26P,TM9SF4	63803,-16536
chr15:37392155-37392639	chr15	+	37392154	37392686	True	NM_170674,NM_170675,NM_170676,NM_170677,NM_172315,NM_172316,NM_002399,NM_032499	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,-,-,-,-,-,+	MEIS2,MEIS2,MEIS2,MEIS2,MEIS2,MEIS2,MEIS2,C15orf41	68,68,68,68,-1651,-557,864,-459400
chr22:17518398-17518793	chr22	+	17518422	17518648	True	NM_001037814,NR_015352	chr22,chr22	-,+	GAB4,CECR7	-29310,-1013
chr18:9137986-9138230	chr18	+	9137991	9138119	True	NM_001204056,NM_001083625,NM_001042388,NM_015208	chr18,chr18,chr18,chr18	+,+,-,+	ANKRD12,ANKRD12,PPP4R1,ANKRD12	-482,-1292,476539,-1292
chr4:129731119-129731377	chr4	+	129731199	129731325	True	NM_199320,NM_024900,NM_144643	chr4,chr4,chr4	+,+,-	PHF17,PHF17,SCLT1	-471,-471,283489
chr13:52586220-52586561	chr13	+	52586356	52586540	True	NR_036571,NM_000053,NM_001005918,NM_001004127	chr13,chr13,chr13,chr13	+,-,-,+	ALG11,ATP7B,ATP7B,ALG11	-18,-726,-726,-18
chr12:120638439-120638688	chr12	+	120638441	120638649	True	NM_053275,NM_012240,NM_006836,NM_001002	chr12,chr12,chr12,chr12	-,+,-,-	RPLP0,SIRT4,GCN1L1,RPLP0	415,101474,-5928,415
chr9:41607568-41608454	chr9	+	41607583	41608231	True	NM_001113541,NR_003528	chr9,chr9	+,-	FAM75A5,LOC653501	-106955,1371
chr9:41607568-41608454	chr9	+	39462565	39463213	False	NM_001040065,NR_003528	chr9,chr9	+,-	FAM75A2,LOC653501	-106917,1371
chr9:41607568-41608454	chr9	+	40790155	40790803	False	NR_026801,NM_033160	chr9,chr9	+,-	FAM74A3,ZNF658	-74682,1367
chrX:65717148-65717348	chrX	+	65717322	65717395	True	NM_001199689,NM_014799	chrX,chrX	-,+	EDA2R,HEPH	141552,-333264
chr3:128970522-128971683	chr3	+	128970866	128971550	True	NM_006026,NM_016128	chr3,chr3	-,+	H1FX,COPG	63620,-2476
chr19:11785186-11786321	chr19	+	11785496	11786130	True	NR_028594,NM_001080493	chr19,chr19	+,-	ZNF833P,ZNF823	-739,63680
chr13:21512931-21514018	chr13	+	21513219	21513961	True	NM_022459,NM_005870	chr13,chr13	-,+	XPO4,SAP18	-36306,200691
chr22:44354449-44356170	chr22	+	44354649	44356175	True	NM_138814,NM_015380	chr22,chr22	-,+	PNPLA5,SAMM50	-66756,-3450
chr9:131261423-131262365	chr9	+	131261462	131262380	True	NM_001003722,NM_001499,NR_029837	chr9,chr9,chr9	+,+,-	GLE1,GLE1,MIR219-2	4590,4590,-106469
chr16:89643307-89643897	chr16	+	89643406	89643870	True	NM_153636,NM_001083314,NM_014427	chr16,chr16,chr16	+,-,+	CPNE7,CHMP1A,CPNE7	-1281,80309,-1281
chr4:178649924-178650572	chr4	+	178649957	178650555	True	NR_033655,NR_028342	chr4,chr4	-,+	AGA,LOC285501	-286300,-97
chr1:22304427-22305394	chr1	+	22304537	22305161	True	NM_005529,NM_007352	chr1,chr1	-,+	HSPG2,CELA3B	-40787,-1170
chr11:64581653-64582859	chr11	+	64581664	64582642	True	NM_006244,NM_130799,NM_000244,NM_130804,NM_130803,NM_130802,NM_130801,NM_130800	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,-,-,-,-,-,-,-	PPP2R5B,MEN1,MEN1,MEN1,MEN1,MEN1,MEN1,MEN1	109500,-3476,-3476,-2898,-2898,-3451,-3629,-3629
chr22:41984689-41985112	chr22	+	41984992	41985156	True	NM_014460,NM_002676	chr22,chr22	+,-	CSDC2,PMM1	-28030,765
chr13:51665310-51666565	chr13	+	51665315	51666315	True	NR_003923,NM_145019	chr13,chr13	-,+	GUCY1B2,FAM124A	-25022,130191
chr16:4353473-4354120	chr16	+	4353991	4354061	True	NM_032575,NM_003223	chr16,chr16	+,-	GLIS2,TFAP4	28163,-30990
chr10:62149486-62150357	chr10	+	62149520	62150394	True	NM_001170406,NM_020987	chr10,chr10	+,-	CDK1,ANK3	387694,-46
chr3:125648649-125649130	chr3	+	125649054	125649176	True	NM_001015050,NR_024251,NM_001195223	chr3,chr3,chr3	-,+,-	ALG1L,LOC100125556,ALG1L	6761,-13661,6761
chr11:46359003-46359766	chr11	+	46359148	46359664	True	NM_001199266,NM_001199267,NM_000741,NM_001199268,NM_201532,NM_201533,NM_003646	chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,-,+,+,+,+	DGKZ,DGKZ,CHRM4,DGKZ,DGKZ,DGKZ,DGKZ	9291,9291,48493,9291,-4744,7152,9291
chr12:27615387-27615990	chr12	+	27615399	27615898	True	NM_001145010,NM_001146221	chr12,chr12	+,-	C12orf70,LOC100287284	3844,308361
chr17:32903715-32903942	chr17	+	32903791	32903930	True	NM_207454,NM_207313	chr17,chr17	-,+	C17orf102,TMEM132E	2509,3837
chr17:9696316-9696601	chr17	+	9696397	9696583	True	NM_001105571,NM_004246	chr17,chr17	-,+	DHRS7C,GLP2R	-1796,32797
chr7:77425547-77426378	chr7	+	77425778	77426333	True	NM_032936,NM_001127360,NM_001127358	chr7,chr7,chr7	-,+,+	TMEM60,PHTF2,PHTF2	1471,1775,1775
chr5:131593933-131594146	chr5	+	131593984	131594058	True	NM_001131027,NM_001142599,NM_003687	chr5,chr5,chr5	+,-,+	PDLIM4,P4HA2,PDLIM4	-684,-30428,-684
chr3:195540690-195540910	chr3	+	195540736	195540874	True	NM_018406,NM_138297,NM_001098516,NM_004532	chr3,chr3,chr3,chr3	-,-,+,-	MUC4,MUC4,MUC20,MUC4	-1588,-1588,-89691,-1588
chr17:66015267-66015599	chr17	+	66015365	66015431	True	NM_002266,NM_181656	chr17,chr17	+,-	KPNA2,C17orf58	16416,-25600
chr4:108911345-108911710	chr4	+	108911405	108911713	True	NM_005327,NM_001166119,NM_001184705	chr4,chr4,chr4	+,-,+	HADH,LEF1,HADH	-586,176290,-586
chrX:39724658-39725109	chrX	+	39724659	39725005	True	NM_005765,NM_001123385	chrX,chrX	+,-	ATP6AP2,BCOR	715210,231764
chr21:18885277-18885528	chr21	+	18885384	18885500	True	NM_001130914,NM_001338	chr21,chr21	-,+	BTG3,CXADR	99818,-105
chr11:47927084-47927464	chr11	+	47927242	47927500	True	NM_015231,NM_001098503	chr11,chr11	-,+	NUP160,PTPRJ	-57185,74609
chr19:10961270-10961888	chr19	+	10961279	10961713	True	NM_001136482,NM_006858	chr19,chr19	+,-	C19orf38,TMED1	-2224,-14296
chr2:88470602-88472397	chr2	+	88470686	88472316	True	NM_018271,NM_001443	chr2,chr2	+,-	THNSL2,FABP1	-902,-43036
chr2:227697649-227699583	chr2	+	227697759	227699452	True	NM_001167608,NM_032276,NM_005544	chr2,chr2,chr2	+,+,-	RHBDD1,RHBDD1,IRS1	1218,1218,-34253
chr11:95638585-95639145	chr11	+	95638586	95639121	True	NM_014679,NM_016156	chr11,chr11	+,-	CEP57,MTMR2	-115006,18307
chr6:152957255-152957832	chr6	+	152957382	152957719	True	NM_025107,NM_182961,NM_033071	chr6,chr6,chr6	+,-,-	MYCT1,SYNE1,SYNE1	61310,866,318
chr19:19250549-19252219	chr19	+	19250572	19251054	True	NM_017814,NM_003721	chr19,chr19	-,+	TMEM161A,RFXANK	-1305,51953
chr12:107978482-107980267	chr12	+	107978582	107980038	True	NM_012406,NM_001017523	chr12,chr12	-,+	PRDM4,BTBD11	174926,-4006
chr14:74352741-74353382	chr14	+	74352880	74353348	True	NM_152445,NM_021188	chr14,chr14	-,+	FAM161B,ZNF410	63537,237
chr5:175665988-175666361	chr5	+	175665996	175666348	True	NR_036494,NM_198567	chr5,chr5	-,+	LOC643201,C5orf25	-39698,-677
chr5:175665988-175666361	chr5	-	177098326	177098665	False	NR_026921,NM_007255	chr5,chr5	-,+	LOC202181,B4GALT7	663,-71261
chr11:46366161-46366950	chr11	+	46366380	46366684	True	NM_001199266,NM_001199267,NM_000741,NM_001199268,NM_201533,NM_003646	chr11,chr11,chr11,chr11,chr11,chr11	+,+,-,+,+,+	DGKZ,DGKZ,CHRM4,DGKZ,DGKZ,DGKZ	2271,2271,41473,2271,132,2271
chr17:15845355-15845595	chr17	+	15845360	15845562	True	NM_000676,NM_001042697	chr17,chr17	+,-	ADORA2B,ZSWIM7	2668,57494
chr2:201183647-201184008	chr2	+	201183651	201184027	True	NM_001100423,NM_152387	chr2,chr2	+,-	SPATS2L,KCTD18	-12353,190815
chr11:124629893-124630253	chr11	+	124629960	124630244	True	NM_138961,NM_006176,NM_014312	chr11,chr11,chr11	-,+,-	ESAM,NRGN,VSIG2	2029,-20185,-7851
chr11:118754384-118754639	chr11	+	118754483	118754687	True	NM_001716,NM_182557,NM_032966	chr11,chr11,chr11	+,-,+	CXCR5,BCL9L,CXCR5	7,26976,9413
chr7:65579507-65579793	chr7	+	65579674	65579734	True	NR_024548,NM_001040647,NM_014478,NM_001040648,NM_001142414,NM_000181	chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,+,-	CRCP,CRCP,CRCP,CRCP,CRCP,GUSB	70,70,70,70,70,-132373
chr2:219079701-219080362	chr2	+	219079875	219080072	True	NM_000634,NM_005731,NM_152862	chr2,chr2,chr2	-,+,+	CXCR1,ARPC2,ARPC2	-48159,2047,1801
chr17:38212702-38212949	chr17	+	38212707	38212969	True	NM_014815,NM_001079518,NM_199334,NM_001190919,NM_001190918,NM_003250	chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,+,+,+	MED24,MED24,THRA,THRA,THRA,THRA	-1818,-1818,6098,5476,6098,6098
chr5:54829316-54830192	chr5	+	54829327	54830013	True	NR_001575,NM_001166533,NM_003711,NM_176895	chr5,chr5,chr5,chr5	-,+,-,-	RNF138P1,DDX4,PPAP2A,PPAP2A	407,203831,910,910
chr17:61846828-61847626	chr17	+	61847041	61847311	True	NM_203499,NM_007372,NM_020198	chr17,chr17,chr17	+,+,-	DDX42,DDX42,CCDC47	4255,4255,3835
chr2:113402058-113403017	chr2	+	113402075	113402929	True	NR_033871,NM_005415	chr2,chr2	-,+	FLJ42351,SLC20A1	-318,504
chr1:11322991-11323248	chr1	+	11322998	11323172	True	NM_004958,NM_013319	chr1,chr1	-,+	MTOR,UBIAD1	-390,10082
chr8:37376883-37377509	chr8	+	37376994	37377425	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	175875,228189
chr14:77098681-77099506	chr14	+	77098974	77099429	True	NM_015305,NM_014909	chr14,chr14	-,+	ANGEL1,VASH1	179907,128805
chr1:12677616-12678015	chr1	+	12677749	12678009	True	NM_004753,NM_001013630	chr1,chr1	-,+	DHRS3,AADACL4	71,26556
chr5:176454144-176455196	chr5	+	176454335	176454985	True	NM_012279,NM_001199298	chr5,chr5	+,-	ZNF346,UIMC1	-4689,-20540
chr12:124118470-124118701	chr12	+	124118484	124118626	True	NM_001414,NM_001516	chr12,chr12	-,+	EIF2B1,GTF2H3	-161,-154
chr7:141676052-141677201	chr7	+	141676314	141676883	True	NM_004668,NM_176817	chr7,chr7	+,-	MGAM,TAS2R38	18795,-2741
chr17:46906136-46906594	chr17	+	46906165	46906451	True	NM_005831,NM_001130918	chr17,chr17	+,-	CALCOCO2,TTLL6	1920,-11696
chr18:59562539-59562823	chr18	+	59562609	59562669	True	NM_020854,NM_173557	chr18,chr18	+,-	KIAA1468,RNF152	291854,-2305
chr10:103575334-103575882	chr10	+	103575347	103575719	True	NR_036114,NM_012215,NM_001142434	chr10,chr10,chr10	+,-,-	MIR3158-1,MGEA5,MGEA5	-214230,2562,2562
chr1:249157380-249157601	chr1	+	249157409	249157599	True	NM_001193328,NM_001136036,NM_024836	chr1,chr1,chr1	-,-,+	ZNF692,ZNF692,ZNF672	-4094,-4284,-24930
chr15:100205908-100207516	chr15	+	100206919	100207396	True	NM_001130928,NM_152449	chr15,chr15	+,-	MEF2A,LYSMD4	-33796,66287
chr17:57647260-57648740	chr17	+	57647871	57648552	True	NM_016077,NM_024612,NM_001166301	chr17,chr17,chr17	-,+,+	PTRH2,DHX40,DHX40	136354,-5045,-5045
chr6:39290277-39290524	chr6	+	39290459	39290531	True	NM_001135105,NM_032115,NM_001135107,NM_001135106,NM_001135111,NM_031460,NM_002062	chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,-,-,-,+	KCNK16,KCNK16,KCNK16,KCNK16,KCNK17,KCNK17,GLP1R	-129,-129,-129,-129,-8222,-8223,-273953
chr7:92781948-92783783	chr7	+	92782164	92783823	True	NM_024553,NM_152703	chr7,chr7	+,-	CCDC132,SAMD9L	77829,-4484
chr18:29776024-29776436	chr18	+	29776147	29776475	True	NM_005925,NM_014939	chr18,chr18	+,-	MEP1B,TRAPPC8	-6212,-253056
chr7:38936225-38936965	chr7	+	38936243	38936971	True	NM_014396,NM_001166018	chr7,chr7	-,+	VPS41,POU6F2	11879,80637
chr3:59037780-59039135	chr3	+	59037791	59039061	True	NM_198463,NM_153331	chr3,chr3	-,+	C3orf67,KCTD6	-2076,-553752
chr12:5231558-5232124	chr12	+	5231601	5232162	True	NM_006422,NM_002234	chr12,chr12	-,+	AKAP3,KCNA5	-477258,-78580
chr15:25494817-25495265	chr15	+	25494839	25495259	True	NR_003353,NR_003358,NM_130838,NR_003344,NR_003351,NR_003357,NR_003356,NR_003355,NR_003354,NR_003302,NR_003303,NR_003359	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,-,+,+,+,+,+,+,+,+,+	SNORD115-38,SNORD115-43,UBE3A,SNORD115-29,SNORD115-36,SNORD115-42,SNORD115-41,SNORD115-40,SNORD115-39,SNORD115-10,SNORD115-11,SNORD115-44	-9905,-545,155444,-545,-545,-2398,-4265,-6129,-7997,-2398,-545,746
chr1:212585860-212587661	chr1	+	212586050	212587546	True	NM_018252,NM_001198862,NM_013349	chr1,chr1,chr1	-,-,+	TMEM206,TMEM206,NENF	771,747,18682
chr15:74216603-74217219	chr15	+	74216727	74217245	True	NM_004809,NM_005576	chr15,chr15	-,+	STOML1,LOXL1	67440,1543
chr1:11253894-11254732	chr1	+	11253899	11254780	True	NM_021146,NM_004958	chr1,chr1	+,-	ANGPTL7,MTOR	-4565,67878
chr3:87023513-87024740	chr3	+	87023601	87024325	True	NM_016206,NM_014043	chr3,chr3	-,+	VGLL3,CHMP2B	15992,252087
chr19:44848070-44849236	chr19	+	44848074	44849194	True	NM_001083335,NM_181756	chr19,chr19	-,+	ZFP112,ZNF233	11712,-84049
chr15:22955361-22955754	chr15	+	22955442	22955786	True	NM_001033028,NM_001008860	chr15,chr15	+,-	CYFIP1,NIPA2	-32,78691
chr2:242089886-242090097	chr2	+	242090007	242090069	True	NM_015148,NM_002712	chr2,chr2	-,+	PASK,PPP1R7	-1129,-156
chr10:18926614-18927903	chr10	+	18926822	18927773	True	NM_178815,NM_182543	chr10,chr10	+,-	ARL5B,NSUN6	20539,12827
chrX:47863942-47864323	chrX	+	47863957	47864169	True	NM_001007088,NM_205856,NM_006962,NM_001178099,NM_001079900	chrX,chrX,chrX,chrX,chrX	-,+,-,-,+	ZNF182,SPACA5,ZNF182,ZNF182,SPACA5B	-580,-281,-580,-563,3000
chrX:47863942-47864323	chrX	+	47986826	47987038	False	NM_205856,NR_033730,NM_001079900	chrX,chrX,chrX	+,-,+	SPACA5,ZNF630,SPACA5B	-281,-55801,3000
chr5:69493184-69494052	chr6	+	26847426	26847485	False	NR_003504,NR_026775	chr6,chr6	-,+	GUSBL1,NCRNA00240	76907,77286
chr5:69493184-69494052	chr6	+	58247010	58247069	False	NM_000947,NR_003660	chr6,chr6	+,-	PRIM2,GUSBP4	-1064648,40714
chr5:69493184-69494052	chr5	+	69493680	69494086	True	NM_022877,NR_024054	chr5,chr5	+,-	SMN2,LOC100170939	-148383,27586
chr5:69493184-69494052	chr5	-	69215689	69216095	False	NM_022968,NR_027386	chr5,chr5	+,-	SERF1A,GUSBP3	104976,-209417
chr5:69493184-69494052	chr5	-	70090737	70091143	False	NM_022968,NR_034021	chr5,chr5	+,-	SERF1A,SMA5	105346,-209188
chr5:69493184-69494052	chr5	+	70494071	70494477	False	NR_003922,NR_033968	chr5,chr5	+,-	PMCHL2,LOC100049076	177134,60695
chr5:69493184-69494052	chr5	-	21500921	21500980	False	NR_027026,NM_004061	chr5,chr5	+,-	GUSBP1,CDH12	-41392,1352810
chr5:69493184-69494052	chr5	+	34176869	34176928	False	NM_016568,NR_037951	chr5,chr5	+,-	RXFP3,C1QTNF3-AMACR	-240438,-52236
chr16:30583198-30583487	chr16	+	30583209	30583499	True	NM_001024683,NM_145271,NM_024031	chr16,chr16,chr16	-,-,+	ZNF688,ZNF688,PRR14	279,279,78741
chr5:33439305-33440540	chr5	+	33439503	33440557	True	NM_152295,NM_030955	chr5,chr5	+,-	TARS,ADAMTS12	340,451617
chr12:79466598-79467347	chr12	+	79466597	79467316	True	NM_001135806,NM_002583	chr12,chr12	+,-	SYT1,PAWR	-27215,617524
chr14:92980326-92980625	chr14	+	92980495	92980623	True	NM_001008530,NM_024832	chr14,chr14	-,+	LGMN,RIN3	234474,-421
chr19:39905842-39906408	chr19	+	39905856	39906430	True	NM_003407,NM_001020,NM_022835	chr19,chr19,chr19	+,-,+	ZFP36,RPS16,PLEKHG2	-8420,20238,-2157
chr19:47615824-47616114	chr19	+	47615950	47616070	True	NM_015168,NM_001145713	chr19,chr19	-,+	ZC3H4,SAE1	989,18009
chr14:77565113-77565327	chr14	+	77565131	77565367	True	NM_174976,NM_033426	chr14,chr14	-,+	ZDHHC22,KIAA1737	42817,-604
chr19:54974083-54974363	chr19	+	54974086	54974348	True	NM_198988,NM_052925	chr19,chr19	-,+	LENG9,LENG8	596,-14072
chr19:10655687-10655961	chr19	+	10655825	10655966	True	NM_023008,NR_031603,NM_032885	chr19,chr19,chr19	-,+,+	KRI1,MIR1238,ATG4D	20793,6831,-1229
chr20:31991559-31992495	chr20	+	31991707	31992286	True	NM_016408,NM_001032999,NM_016082	chr20,chr20,chr20	-,+,-	CDK5RAP1,CBFA2T2,CDK5RAP1	-2370,85641,-2370
chr19:45663153-45663413	chr19	+	45663175	45663423	True	NM_212550,NM_198478	chr19,chr19	+,-	BLOC1S3,NKPD1	18579,35
chr9:46268579-46269096	chr9	+	46268650	46268984	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2637920,418581
chr9:46268579-46269096	chr9	+	67677582	67677632	False	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	116607,249128
chr9:46268579-46269096	chr9	-	47171813	47171863	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-3541083,-484298
chr9:46268579-46269096	chr9	+	44756359	44756409	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	233826,-1125629
chr9:46268579-46269096	chr9	-	45114337	45114671	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-124152,-1483607
chr11:108461667-108463614	chr11	+	108461793	108463565	True	NM_015065,NM_004398	chr11,chr11	-,+	EXPH5,DDX10	859,72250
chr21:45659080-45659926	chr21	+	45659183	45659974	True	NM_000383,NM_015259	chr21,chr21	+,-	AIRE,ICOSLG	45788,917
chr9:46293882-46294653	chr9	+	46293892	46294362	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2663162,393203
chr9:46293882-46294653	chr9	+	67702816	67702866	False	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	91373,223894
chr9:46293882-46294653	chr9	-	46210158	46210238	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2579428,477327
chr9:46293882-46294653	chr9	-	45089094	45089326	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-98909,-1458364
chr5:16934279-16934549	chr5	+	16934278	16934590	True	NM_012334,NM_006317	chr5,chr5	-,+	MYO10,BASP1	1845,283159
chr10:24497481-24497848	chr10	+	24497481	24497748	True	NM_019590,NM_001098501,NM_020824	chr10,chr10,chr10	+,+,-	KIAA1217,KIAA1217,ARHGAP21	13,13,514899
chrX:48366235-48366922	chrX	+	48366704	48366938	True	NM_203475,NM_203474,NM_033518,NM_022825,NM_203473	chrX,chrX,chrX,chrX,chrX	+,+,-,+,+	PORCN,PORCN,SLC38A5,PORCN,PORCN	1233,1233,-38060,432,432
chr15:25313778-25315689	chr15	+	25313844	25315522	True	NR_003322,NR_003323,NR_003320,NR_003321,NR_003326,NR_003327,NR_003324,NR_003325,NR_003328,NR_003329,NR_003319,NR_003318,NM_130838,NR_003317	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,+,+,+,-,+	SNORD116-7,SNORD116-8,SNORD116-5,SNORD116-6,SNORD116-11,SNORD116-12,SNORD116-9,SNORD116-10,SNORD116-13,SNORD116-14,SNORD116-4,SNORD116-3,UBE3A,SNORD116-2	-961,55,-961,-3723,5552,6674,2730,3737,8681,9765,-9211,2730,335181,-3723
chr2:74733904-74734212	chr2	+	74733911	74734253	True	NR_024606,NM_001009812,NM_032673,NM_016170	chr2,chr2,chr2,chr2	+,-,-,+	LOC151534,LBX2,PCGF1,TLX2	-4218,-3468,618,7342
chr17:17487768-17488506	chr17	+	17487957	17488347	True	NM_007169,NM_030665,NM_148172,NM_148173	chr17,chr17,chr17,chr17	-,+,-,-	PEMT,RAI1,PEMT,PEMT	-2212,96439,6697,-7178
chr2:233273670-233274060	chr2	+	233273669	233274105	True	NM_031313,NR_028501	chr2,chr2	+,-	ALPPL2,ECEL1P2	-2168,-21915
chr2:233273670-233274060	chr2	+	233245588	233246024	False	NR_028501,NM_001632	chr2,chr2	-,+	ECEL1P2,ALPP	5780,-2291
chr19:39440543-39440889	chr19	+	39440625	39440851	True	NM_148169,NM_033363	chr19,chr19	-,+	FBXO17,MRPS12	2526,-19082
chr7:72742624-72742967	chr7	+	72742632	72742783	True	NM_001135211,NM_003602,NM_178125	chr7,chr7,chr7	+,+,-	FKBP6,FKBP6,TRIM50	-528,-383,-547
chr7:72742624-72742967	chr7	+	72440542	72440686	False	NR_033323,NR_003602	chr7,chr7	-,+	NSUN5P2,LOC541473	-15240,-401
chr7:72742624-72742967	chr7	-	75024210	75024354	False	NM_198853,NM_198924,NR_003614	chr7,chr7,chr7	+,+,-	TRIM74,TRIM73,PMS2L2	548,548,-35995
chr8:38243611-38244031	chr8	+	38243615	38243971	True	NM_017778,NM_001199660,NM_023034,NM_001199659,NM_144652	chr8,chr8,chr8,chr8,chr8	-,+,-,+,+	WHSC1L1,LETM2,WHSC1L1,LETM2,LETM2	-3825,677,-3825,-13,-13
chr6:86352991-86353264	chr6	+	86353024	86353313	True	NM_006372,NM_002526,NM_001159673,NM_001159675,NM_001159674,NM_001159677,NM_001159676	chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,+,-,-,-,-,-	SYNCRIP,NT5E,SYNCRIP,SYNCRIP,SYNCRIP,SYNCRIP,SYNCRIP	5,-193773,-384,-1855,-416,5,-1855
chr8:10694273-10694918	chr8	+	10694275	10694847	True	NM_001040032,NM_017884	chr8,chr8	+,-	C8orf74,PINX1	-164179,2502
chr2:166616991-166617971	chr2	+	166617004	166617720	True	NM_004482,NM_024969	chr2,chr2	-,+	GALNT3,CSRNP3	33142,-188209
chr11:65226008-65227174	chr11	+	65226151	65227100	True	NR_030343,NM_182556	chr11,chr11	+,-	MIR612,SLC25A45	-14273,-76009
chr7:103086129-103086343	chr7	+	103086145	103086361	True	NM_206885,NM_206884,NM_206883,NM_002803,NM_198999,NM_001167962	chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,+,-,-	SLC26A5,SLC26A5,SLC26A5,PSMC2,SLC26A5,SLC26A5	313,313,313,-98225,313,313
chr1:59762831-59763214	chr1	+	59762912	59763105	True	NR_027120,NM_018291,NM_001113411	chr1,chr1,chr1	-,+,+	LOC729467,FGGY,FGGY	-150433,-338,-338
chr17:5385661-5387657	chr17	+	5385814	5387426	True	NM_016041,NM_024039	chr17,chr17	-,+	DERL2,MIS12	2125,2820
chr2:33150627-33152396	chr2	+	33150649	33152079	True	NM_021209,NR_027097	chr2,chr2	-,+	NLRC4,LOC100271832	-659837,114
chr13:114109129-114109727	chr13	+	114109360	114109770	True	NM_017905,NM_138430,NM_199162	chr13,chr13,chr13	+,-,-	TMCO3,ADPRHL1,ADPRHL1	35537,-1521,-5903
chr17:6339579-6339787	chr17	+	6339597	6339663	True	NM_019013,NM_014336,NM_001195228,NM_001033054,NM_001033055	chr17,chr17,chr17,chr17,chr17	+,-,+,-,-	FAM64A,AIPL1,FAM64A,AIPL1,AIPL1	8071,-1078,8071,-1078,-1078
chr19:18200357-18200784	chr19	+	18200563	18200731	True	NM_015016,NM_005535,NM_153701	chr19,chr19,chr19	+,-,-	MAST3,IL12RB1,IL12RB1	7871,-2866,-2866
chr11:117197281-117198498	chr11	+	117197493	117198448	True	NM_014956,NM_138973	chr11,chr11	+,-	CEP164,BACE1	122,-10521
chr8:21911126-21911502	chr8	+	21911241	21911551	True	NM_001978,NM_024815,NM_001114135,NM_001114137,NM_001114136,NM_001114139,NM_001114138	chr8,chr8,chr8,chr8,chr8,chr8,chr8	+,-,+,+,+,+,+	EPB49,NUDT18,EPB49,EPB49,EPB49,EPB49,EPB49	5134,55431,3824,-211,776,776,5134
chr11:57146354-57147594	chr11	+	57146391	57147495	True	NM_006093,NM_002559	chr11,chr11	-,+	PRG3,P2RX3	1178,-40500
chr4:85781654-85782083	chr4	+	85781657	85782103	True	NM_014991,NR_015359	chr4,chr4	-,+	WDFY3,NCRNA00247	105493,105867
chr20:34823038-34823297	chr20	+	34823039	34823299	True	NR_027451,NM_015511	chr20,chr20	-,+	LOC647979,C20orf4	-184157,1147
chr6:168687064-168688299	chr6	+	168687093	168688125	True	NM_214462,NM_001166412	chr6,chr6	-,+	DACT2,SMOC2	32327,153705
chr12:48921438-48921708	chr12	+	48921522	48921747	True	NM_001005203,NM_002289	chr12,chr12	+,-	OR8S1,LALBA	-2163,42132
chr20:44144686-44145762	chr20	+	44144731	44145535	True	NM_006103,NM_006652	chr20,chr20	+,-	WFDC2,SPINT3	-46388,-467
chr2:234179813-234180217	chr2	+	234179814	234180266	True	NR_003008,NM_018218	chr2,chr2	+,-	SCARNA5,USP40	4105,294020
chr15:43940595-43940928	chr15	+	43940605	43940887	True	NM_054020,NM_172097,NM_172095,NM_001015001	chr15,chr15,chr15,chr15	-,-,-,+	CATSPER2,CATSPER2,CATSPER2,CKMT1A	202,202,202,44196
chr15:43940595-43940928	chr15	+	44038152	44038202	False	NR_002318,NM_005313	chr15,chr15	-,+	CATSPER2P1,PDIA3	344,387
chr1:229568313-229568665	chr1	+	229568349	229568639	True	NM_006542,NM_001100	chr1,chr1	+,-	SPHAR,ACTA1	-128271,1254
chr11:797443-797649	chr11	+	797468	797530	True	NM_145887,NM_145886,NM_001191060,NM_024698,NM_001191061,NM_001004,NM_016564	chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,-,+,-	LRDD,LRDD,SLC25A22,SLC25A22,SLC25A22,RPLP2,CEND1	7770,7770,515,-1205,789,12405,-7342
chr17:35958632-35959487	chr17	+	35958635	35959438	True	NM_007026,NM_001163544	chr17,chr17	+,-	DUSP14,SYNRG	-108735,10101
chr3:196669570-196669926	chr3	+	196669618	196669954	True	NM_007362,NR_024388,NM_001042540	chr3,chr3,chr3	-,+,-	NCBP2,LOC152217,NCBP2	-154,-175,-154
chr19:14691097-14691785	chr19	+	14691372	14691784	True	NM_004146,NM_207390,NM_001204118	chr19,chr19,chr19	-,+,+	NDUFB7,CLEC17A,CLEC17A	-8483,2111,2111
chr8:23313400-23314713	chr8	+	23313423	23314706	True	NM_016612,NM_001128930,NM_004901	chr8,chr8,chr8	+,-,-	SLC25A37,ENTPD4,ENTPD4	71656,589,481
chr16:48421818-48422831	chr16	+	48422131	48422761	True	NM_003031,NM_031490	chr16,chr16	-,+	SIAH1,LONP2	-2902,-143980
chr9:125132231-125132714	chr9	+	125132386	125132730	True	NR_027126,NM_080591,NM_000962	chr9,chr9,chr9	-,+,+	RBM18,PTGS1,PTGS1	-105243,498,498
chr1:231556252-231556511	chr1	+	231556252	231556546	True	NM_032018,NM_022051	chr1,chr1	+,-	C1orf124,EGLN1	-82622,4294
chr21:39869605-39870625	chr21	+	39869729	39870430	True	NM_182918,NM_170737,NM_001136155	chr21,chr21,chr21	-,+,-	ERG,KCNJ15,ERG	50,-225351,50
chr9:67287507-67288795	chr9	+	67287670	67288828	True	NM_032250,NR_002817	chr9,chr9	+,-	ANKRD20A1,AQP7P1	637932,714
chr9:67287507-67288795	chr9	-	67031947	67032723	False	NR_024443,NR_024496	chr9,chr9	-,+	LOC100133920,LOC442421	-965,-537729
chr9:67287507-67288795	chr9	+	69649611	69650779	False	NM_001085457,NR_024443	chr9,chr9	-,+	CBWD6,LOC100133920	-387018,581
chr9:67287507-67288795	chr9	-	42858574	42859736	False	NR_026759,NR_026558	chr9,chr9	-,+	FAM95B1,AQP7P3	173626,-473
chr9:67287507-67288795	chr9	+	33400973	33401833	False	NM_001170,NM_002504	chr9,chr9	-,+	AQP7,NFX1	734,-110606
chr9:97353746-97353998	chr9	+	97353899	97354047	True	NM_003837,NM_001193331	chr9,chr9	-,+	FBP2,C9orf3	2078,134903
chr17:73522933-73523509	chr17	+	73523299	73523479	True	NM_001031803,NM_020753,NM_001015002,NM_004524	chr17,chr17,chr17,chr17	+,-,+,+	LLGL2,CASKIN2,LLGL2,LLGL2	-1567,-11672,-1567,-1567
chr22:25828501-25830192	chr22	+	25828889	25830233	True	NM_001135772,NR_033733	chr22,chr22	-,+	LRP5L,CRYBB2P1	-51345,13820
chr22:25828501-25830192	chr22	-	23939099	23939164	False	NM_153615,NM_152855	chr22,chr22	+,-	RGL4,IGLL1	93883,-16604
chr19:1488928-1489221	chr19	+	1488932	1489134	True	NM_138393,NM_152482,NM_017573	chr19,chr19,chr19	+,-,-	REEP6,C19orf25,PCSK4	2030,-9704,1323
chr5:150137387-150137766	chr5	+	150137403	150137736	True	NM_032947,NM_001135644,NM_001135643,NM_016221	chr5,chr5,chr5,chr5	+,-,-,-	C5orf62,DCTN4,DCTN4,DCTN4	19771,397,972,972
chr9:34523556-34523990	chr9	+	34523591	34524023	True	NR_024369,NM_198573	chr9,chr9	+,-	LOC415056,ENHO	43986,-554
chr12:6982820-6983045	chr12	+	6982830	6983040	True	NM_032641,NM_000365,NM_001146316,NR_027483,NM_001159287	chr12,chr12,chr12,chr12,chr12	-,+,-,+,+	SPSB2,TPI1,SPSB2,TPI1,TPI1	-309,-6188,-381,-5603,-6297
chr3:113233557-113233799	chr3	+	113233649	113233793	True	NM_144718,NM_017699	chr3,chr3	-,+	SPICE1,SIDT1	291,17424
chr12:103294252-103296005	chr12	+	103294275	103296017	True	NM_000277,NM_004316	chr12,chr12	-,+	PAH,ASCL1	15414,55434
chr2:23618441-23620392	chr2	+	23618773	23620405	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	529580,-10526
chr1:12847440-12848650	chr1	+	12847864	12848332	True	NM_023013,NM_001146344	chr1,chr1	+,-	PRAMEF1,PRAMEF11	3213,42982
chr5:141339891-141340508	chr5	+	141339914	141340480	True	NM_183399,NM_183398,NM_001201365,NM_016580,NM_183401,NM_183400,NM_004290	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,-,+,+,+	RNF14,RNF14,RNF14,PCDH12,RNF14,RNF14,RNF14	5921,7970,5921,-1287,8231,7970,7970
chr7:129710628-129712267	chr7	+	129710817	129712300	True	NM_016478,NM_014997	chr7,chr7	-,+	ZC3HC1,KLHDC10	-19584,-519
chr8:131413285-131414254	chr8	+	131413418	131414167	True	NM_015137,NM_018482	chr8,chr8	+,-	EFR3A,ASAP1	1502188,101
chr17:46981921-46982370	chr17	+	46981920	46982358	True	NM_023079,NM_007241	chr17,chr17	+,-	UBE2Z,SNF8	3372,39852
chr6:52050131-52050743	chr6	+	52050136	52050767	True	NM_002190,NM_052872	chr6,chr6	+,-	IL17A,IL17F	417,58582
chr4:8442012-8442450	chr4	+	8442050	8442340	True	NM_003501,NM_001101667,NM_152544	chr4,chr4,chr4	-,-,+	ACOX3,ACOX3,METTL19	162,162,191
chr19:14955633-14956888	chr19	+	14955763	14956655	True	NM_001005190,NM_012377	chr19,chr19	-,+	OR7A10,OR7C2	-3074,95645
chr9:19269450-19270720	chr9	+	19269929	19270738	True	NM_001010,NM_017925	chr9,chr9	-,+	RPS6,DENND4C	109550,20010
chr12:67040326-67042052	chr12	+	67040333	67042089	True	NM_001178074,NM_033647	chr12,chr12	-,+	GRIP1,HELB	30886,-344029
chrX:135579727-135579943	chrX	+	135579835	135579927	True	NM_001163280,NM_001727,NM_014500,NM_001173516	chrX,chrX,chrX,chrX	+,+,+,-	HTATSF1,BRS3,HTATSF1,MAP7D3	-648,-9761,-215,-241194
chr1:110611664-110611884	chr1	+	110611733	110611851	True	NM_033088,NM_006492	chr1,chr1	+,-	FAM40A,ALX3	-34543,1521
chr6:22290482-22290783	chr6	+	22290488	22290597	True	NM_000948,NM_138574	chr6,chr6	-,+	PRL,HDGFL1	7190,279080
chr19:21946388-21947165	chr19	+	21946431	21947061	True	NR_024523,NM_173531	chr19,chr19	+,-	LOC641367,ZNF100	-12941,3427
chr10:129686269-129686969	chr10	+	129686343	129686985	True	NM_006504,NM_152311	chr10,chr10	+,-	PTPRE,CLRN3	18339,4276
chr3:142165572-142166220	chr3	+	142165704	142166220	True	NM_019001,NM_001145319,NM_001042604	chr3,chr3,chr3	-,+,-	XRN1,PLS1,XRN1	683,149008,683
chr1:1219276-1220068	chr1	+	1219336	1220117	True	NR_037668,NM_194458,NM_001130413	chr1,chr1,chr1	+,-,+	SCNN1D,UBE2J2,SCNN1D	-8749,-10102,-8749
chrX:48660013-48660552	chrX	+	48660018	48660464	True	NM_006044,NM_013271	chrX,chrX	+,-	HDAC6,PCSK1N	22,33546
chr5:180465789-180466511	chr5	+	180465828	180466559	True	NM_152547,NM_203297	chr5,chr5	+,-	BTNL9,TRIM7	665,161421
chr7:42823127-42823888	chr7	+	42823203	42823911	True	NM_031903,NM_001099858	chr7,chr7	+,-	MRPL32,C7orf25	148027,127836
chr20:35507535-35508655	chr20	+	35507677	35508363	True	NM_080628,NM_080627	chr20,chr20	+,-	C20orf118,KIAA0889	-3158,-15590
chr7:107219227-107220343	chr7	+	107220182	107220386	True	NR_027830,NM_001161520,NM_018844,NM_001008405	chr7,chr7,chr7,chr7	+,-,+,+	BCAP29,COG5,BCAP29,BCAP29	35,-15223,35,817
chr9:127625974-127626449	chr9	+	127625976	127626355	True	NM_007209,NM_030978	chr9,chr9	-,+	RPL35,ARPC5L	-1736,5128
chr6:148887449-148887999	chr6	+	148887505	148888021	True	NM_207360,NM_005715	chr6,chr6	-,+	ZC3H12D,UST	918177,180249
chr3:93735649-93736953	chr3	+	93735841	93736809	True	NR_033427,NM_001001850	chr3,chr3	+,-	ARL13B,STX19	-36922,10695
chr10:48355085-48355571	chr10	+	48355096	48355558	True	NM_002900,NM_153034	chr10,chr10	-,+	RBP3,ZNF488	35483,-58
chr13:50265223-50265638	chr13	+	50265359	50265611	True	NM_032565,NM_138450	chr13,chr13	-,+	EBPL,ARL11	62,-62975
chr13:107078398-107078757	chr13	+	107078424	107078784	True	NM_004093,NR_034119	chr13,chr13	-,+	EFNB2,LOC728192	108654,-49564
chr7:87259210-87260797	chr7	+	87259407	87260695	True	NM_000927,NM_001134406,NM_001134405,NM_138290	chr7,chr7,chr7,chr7	-,+,+,+	ABCB1,RUNDC3B,RUNDC3B,RUNDC3B	82001,-1742,-1742,-1742
chr17:40439890-40440187	chr17	+	40440078	40440224	True	NM_012448,NM_003152	chr17,chr17	-,+	STAT5B,STAT5A	-11654,-564
chr22:39898923-39899153	chr22	+	39899009	39899183	True	NM_019008,NM_194326	chr22,chr22	+,-	SMCR7L,RPS19BP1	-783,29727
chr19:54661738-54663234	chr19	+	54661863	54663031	True	NM_014516,NM_024316	chr19,chr19	+,-	CNOT3,LENG1	-20479,469
chr12:45233774-45234342	chr12	+	45233802	45234213	True	NM_001145109,NM_001025356	chr12,chr12	-,+	NELL2,ANO6	35290,375556
chr14:50086674-50087088	chr14	+	50086728	50087088	True	NM_002408,NM_001001	chr14,chr14	+,-	MGAT2,RPL36AL	400,311
chr7:73624998-73625278	chr7	+	73625169	73625327	True	NM_032463,NM_032464,NM_014146,NM_002914	chr7,chr7,chr7,chr7	+,+,+,-	LAT2,LAT2,LAT2,RFC2	-1133,-1133,-1133,43461
chr6:26204297-26204514	chr6	+	26204299	26204563	True	NM_021065,NM_003545,NM_003530,NM_003522	chr6,chr6,chr6,chr6	-,+,-,+	HIST1H2AD,HIST1H4E,HIST1H3D,HIST1H2BF	-4828,309,-4835,-4564
chr5:170217054-170217500	chr5	+	170217219	170217545	True	NM_014211,NM_004137	chr5,chr5	+,-	GABRP,KCNMB1	-6548,-400581
chr22:25985570-25985938	chr22	+	25985605	25985687	True	NM_001135772,NM_005160	chr22,chr22	-,+	LRP5L,ADRBK2	-208061,-24804
chr17:10560859-10561345	chr17	+	10560969	10561355	True	NM_002470,NM_020233	chr17,chr17	-,+	MYH3,C17orf48	-1504,39571
chr17:65988721-65989004	chr17	+	65988849	65989050	True	NM_002266,NM_181656,NM_181655	chr17,chr17,chr17	+,-,-	KPNA2,C17orf58,C17orf58	42797,766,766
chr20:44335735-44337072	chr20	+	44335795	44336872	True	NM_172005,NM_172006,NM_172131	chr20,chr20,chr20	+,-,-	WFDC13,WFDC10B,WFDC10B	-5198,-2137,-2137
chr1:79472534-79473557	chr1	+	79472646	79473480	True	NM_022159,NM_006417	chr1,chr1	-,+	ELTD1,IFI44	-151,-357220
chr1:145474169-145474448	chr1	+	145474252	145474488	True	NM_153713,NM_032305,NM_001039888	chr1,chr1,chr1	+,-,+	LIX1L,POLR3GL,ANKRD34A	2596,-3865,-3795
chr22:19920273-19920871	chr22	+	19920284	19920859	True	NM_006440,NM_000754	chr22,chr22	-,+	TXNRD2,COMT	8551,8403
chr6:49594617-49596132	chr6	+	49594663	49595843	True	NM_001145652,NM_000324	chr6,chr6	+,-	C6orf141,RHAG	-76601,8794
chr9:40716145-40716711	chr9	+	40716148	40716218	True	NR_026801,NM_033160	chr9,chr9	+,-	FAM74A3,ZNF658	-675,75944
chr9:40716145-40716711	chr9	-	65493719	65493789	False	NR_026802,NR_024496,NR_027461	chr9,chr9,chr9	-,+,-	FAM74A4,LOC442421,FAM74A2	647,1000479,647
chr9:40716145-40716711	chr9	+	41516504	41516574	False	NM_001113541,NR_027861	chr9,chr9	+,-	FAM75A5,ZNF658B	-15876,75683
chr9:40716145-40716711	chr9	-	43614832	43614902	False	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	15878,69982
chr20:17508092-17509114	chr20	+	17508631	17509095	True	NM_001011546,NM_001195	chr20,chr20	+,-	DSTN,BFSP1	41503,2968
chr19:51220994-51221263	chr19	+	51220994	51221206	True	NM_016148,NM_002975	chr19,chr19	-,+	SHANK1,CLEC11A	-799,5398
chr19:7601165-7601384	chr19	+	7601209	7601371	True	NM_080662,NM_001166112,NM_001166113,NM_001166111,NM_006702,NM_001166114	chr19,chr19,chr19,chr19,chr19,chr19	-,+,+,+,+,+	PEX11G,PNPLA6,PNPLA6,PNPLA6,PNPLA6,PNPLA6	-47304,-2132,-1624,-1669,-2222,-671
chr5:149570360-149571084	chr5	+	149570499	149570771	True	NM_002609,NM_014228	chr5,chr5	-,+	PDGFRB,SLC6A7	-35077,-1030
chr12:121838703-121839960	chr12	+	121838786	121839895	True	NM_001137559,NM_194271,NM_025126	chr12,chr12,chr12	-,+,+	ANAPC5,RNF34,RNF34	-46774,-944,-944
chr3:38309257-38310907	chr3	+	38309647	38310714	True	NM_004256,NR_024024	chr3,chr3	+,-	SLC22A13,ACAA1	-2406,-130914
chr5:10631958-10632462	chr5	+	10631986	10632389	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-67602,129048
chrX:134883286-134883834	chrX	+	134883313	134883393	True	NM_001017436,NM_001017435	chrX,chrX	-,+	CT45A4,CT45A3	53392,94
chrX:134883286-134883834	chrX	-	134954088	134954168	False	NM_001007551,NM_018666,NM_001172288	chrX,chrX,chrX	-,+,-	CT45A5,SAGE1,CT45A5	-94,21616,-94
chr7:87011803-87013106	chr7	+	87011804	87012580	True	NM_021151,NR_015381	chr7,chr7	+,-	CROT,TP53TG1	-36904,-36996
chr10:6625791-6626433	chr10	+	6625816	6626455	True	NR_036502,NR_036503,NM_006257	chr10,chr10,chr10	+,+,-	LOC439949,LOC439949,PRKCQ	-3480,-3480,-3578
chr18:18819047-18819893	chr18	+	18819470	18819946	True	NM_005406,NM_001142966	chr18,chr18	-,+	ROCK1,GREB1L	-127658,2256
chr19:29708701-29709826	chr19	+	29708801	29709623	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	-252814,-4665
chr1:197300210-197301074	chr1	+	197300310	197301028	True	NM_201253,NM_194314	chr1,chr1	+,-	CRB1,ZBTB41	-63028,-130638
chr1:206865825-206866407	chr1	+	206865949	206866347	True	NM_032960,NM_004759,NM_000572	chr1,chr1,chr1	+,+,-	MAPKAPK2,MAPKAPK2,IL10	-7711,-7711,79542
chr9:31894444-31896317	chr9	+	31894690	31896299	True	NM_014314,NM_002197	chr9,chr9	-,+	DDX58,ACO1	630082,488301
chr2:112250803-112251464	chr2	+	112251032	112251460	True	NR_024373,NM_207003,NR_015395	chr2,chr2,chr2	-,+,-	LOC541471,BCL2L11,LOC541471	1282,-372592,1282
chr2:112250803-112251464	chr2	-	87756317	87756579	False	NM_001078170,NR_024206,NR_024204,NR_024205	chr2,chr2,chr2,chr2	-,+,+,+	RGPD2,NCRNA00152,NCRNA00152,NCRNA00152	368757,-1400,-1400,-1400
chrX:53715811-53717380	chrX	+	53716460	53717184	True	NM_031407,NM_001031745	chrX,chrX	-,+	HUWE1,RIBC1	-2787,-266633
chr4:619555-619757	chr4	+	619604	619786	True	NM_000283,NM_007100,NM_001145291	chr4,chr4,chr4	+,-,+	PDE6B,ATP5I,PDE6B	-292,48391,-292
chr17:43025554-43027072	chr17	+	43025566	43027110	True	NM_001080443,NM_213607	chr17,chr17	-,+	KIF18B,CCDC103	-484,-48463
chr18:74521720-74522104	chr18	+	74521782	74521922	True	NM_007345,NM_001025081	chr18,chr18	+,-	ZNF236,MBP	14193,207183
chr13:111972178-111972568	chr13	+	111972193	111972345	True	NM_152324,NM_017664	chr13,chr13	+,-	C13orf16,ANKRD10	669,-404777
chrX:99849641-99851185	chrX	+	99849816	99850870	True	NM_003270,NM_022144	chrX,chrX	-,+	TSPAN6,TNMD	40987,-10088
chr16:21289690-21291623	chr16	+	21289913	21291328	True	NM_001014444,NR_026675	chr16,chr16	-,+	CRYM,NCRNA00169	23127,20841
chr12:8663724-8664138	chr12	+	8663910	8664130	True	NM_014358,NM_080387	chr12,chr12	-,+	CLEC4E,CLEC4D	29478,2005
chr8:54755076-54755464	chr8	+	54755077	54755453	True	NM_015941,NM_170587,NM_213620,NM_213619	chr8,chr8,chr8,chr8	-,+,-,-	ATP6V1H,RGS20,ATP6V1H,ATP6V1H	447,8914,144,447
chrX:130419804-130420107	chrX	+	130419803	130420129	True	NM_001170961,NM_001170962,NM_001170963,NM_144967,NM_205833,NM_001555	chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,+,-,-	IGSF1,IGSF1,IGSF1,ARHGAP36,IGSF1,IGSF1	3324,3324,2956,-227638,3324,3324
chr8:49832846-49833848	chr8	+	49832939	49833800	True	NM_003068,NM_001007176	chr8,chr8	-,+	SNAI2,C8orf22	249,151102
chr7:65448249-65450102	chr7	+	65448334	65449714	True	NM_000181,NM_000048	chr7,chr7	-,+	GUSB,ASL	-1033,91061
chr21:44392200-44393129	chr21	+	44392271	44393083	True	NM_004571,NM_018669	chr21,chr21	+,-	PKNOX1,WDR4	1559,-92593
chr1:27320013-27320260	chr1	+	27320088	27320258	True	NM_052943,NM_001013642	chr1,chr1	-,+	FAM46B,TRNP1	19125,-46
chr19:44323652-44324854	chr19	+	44323689	44324788	True	NM_182573,NM_181845	chr19,chr19	-,+	LYPD5,ZNF283	70,6684
chr19:50013972-50015325	chr19	+	50014297	50015155	True	NM_004107,NM_001136019,NR_029703	chr19,chr19,chr19	+,+,-	FCGRT,FCGRT,MIR150	1280,380,-10172
chr12:53730070-53731237	chr12	+	53730322	53731206	True	NM_021640,NM_001173467,NM_152860	chr12,chr12,chr12	+,-,-	C12orf10,SP7,SP7	-36903,-318,-785
chr20:23806899-23807734	chr20	+	23806976	23807682	True	NM_001322,NR_001279	chr20,chr20	-,+	CST2,CSTT	138,-307244
chr19:46282643-46283021	chr19	+	46282719	46283045	True	NM_001081563,NM_001081562,NM_004409,NM_001081560,NM_004497	chr19,chr19,chr19,chr19,chr19	-,-,-,-,+	DMPK,DMPK,DMPK,DMPK,FOXA3	866,2820,2820,2820,84472
chr3:125608179-125609028	chr3	+	125608228	125608520	True	NM_001015050,NR_024250	chr3,chr3	-,+	ALG1L,LOC100125556	47417,26923
chr3:98306337-98308020	chr3	+	98306698	98307736	True	NM_005290,NM_000097	chr3,chr3	+,-	GPR15,CPOX	-55871,4771
chr13:95364069-95364290	chr13	+	95364087	95364315	True	NM_180989,NM_007084	chr13,chr13	+,-	GPR180,SOX21	-110034,124
chr12:31902295-31902964	chr12	+	31902309	31902577	True	NR_004854,NM_001135863	chr12,chr12	-,+	AMN1,METTL20	-20201,-89751
chr3:128598283-128598584	chr3	+	128598335	128598477	True	NR_034179,NM_014049,NR_033426	chr3,chr3,chr3	-,+,+	LOC653712,ACAD9,ACAD9	-7951,-53,-53
chr11:75541609-75542253	chr11	+	75541633	75542248	True	NM_003369,NM_207577	chr11,chr11	+,-	UVRAG,MAP6	-15476,-162154
chr4:10622656-10622972	chr4	+	10622733	10622875	True	NR_030298,NM_052964	chr4,chr4	+,-	MIR572,CLNK	747575,63561
chr1:64025782-64026344	chr1	+	64025975	64026136	True	NR_002771,NM_014288	chr1,chr1	+,-	DLEU2L,ITGB3BP	-11383,-37140
chr2:217212372-217212852	chr2	+	217212474	217212683	True	NM_014140,NM_020814	chr2,chr2	+,-	SMARCAL1,MARCH4	64453,24127
chr2:178132850-178133613	chr2	+	178132849	178133419	True	NM_194247,NM_006164,NM_001145412,NM_001145413	chr2,chr2,chr2,chr2	+,-,-,-	HNRNPA3,NFE2L2,NFE2L2,NFE2L2	-55478,-2990,-4232,-4232
chr4:2419305-2419549	chr4	+	2419358	2419568	True	NM_001193282,NM_001172656,NM_001172657,NM_001172658,NM_020972	chr4,chr4,chr4,chr4,chr4	+,-,-,-,-	LOC402160,ZFYVE28,ZFYVE28,ZFYVE28,ZFYVE28	1132,852,852,852,852
chr1:26485836-26487376	chr1	+	26485877	26487421	True	NM_015871,NM_024869,NM_032588	chr1,chr1,chr1	+,+,-	ZNF593,GRRP1,TRIM63	8966,-424,-91756
chr4:21684065-21685182	chr4	+	21684202	21685063	True	NM_001035003,NM_145048	chr4,chr4	-,+	KCNIP4,PACRGL	14312,-982229
chr3:195809077-195810530	chr3	+	195809278	195810344	True	NM_003234,NR_034088,NM_001128148	chr3,chr3,chr3	-,+,-	TFRC,LOC401109,TFRC	-317,59162,-246
chrX:52259378-52260049	chrX	+	52259379	52259982	True	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,-,-,-,-,-,-,-,-,-,-	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	278,222,222,431,222,222,222,278,431,278,431,431,431,278,278
chrX:52259378-52260049	chrX	-	52239190	52239793	False	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,+,+,+,+,+,+,+,+,+,+	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	-278,-222,-222,-431,-222,-222,-222,-278,-431,-278,-431,-431,-431,-278,-278
chrX:52259378-52260049	chrX	-	52512141	52512744	False	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,+,+,+,+,+,+,+,+,+,+	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	-278,-222,-222,-431,-222,-222,-222,-278,-431,-278,-431,-431,-431,-278,-278
chrX:52259378-52260049	chrX	+	52532319	52532922	False	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,-,-,-,-,-,-,-,-,-,-	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	278,222,222,431,222,222,222,278,431,278,431,431,431,278,278
chrX:52259378-52260049	chrX	+	52545213	52545816	False	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,-,-,-,-,-,-,-,-,-,-	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	278,222,222,431,222,222,222,278,431,278,431,431,431,278,278
chr17:21281467-21282189	chr17	+	21281589	21282001	True	NM_152914,NM_021012	chr17,chr17	-,+	C17orf103,KCNJ12	-125011,-1941
chr3:42136392-42136832	chr3	+	42136463	42136854	True	NM_001042646,NM_017886	chr3,chr3	+,-	TRAK1,ULK4	-3768,-132803
chr5:176939060-176939372	chr5	+	176939160	176939406	True	NM_001144875,NM_001174102,NM_024872,NM_001144876,NM_016222	chr5,chr5,chr5,chr5,chr5	-,+,-,-,-	DOK3,PRR7,DOK3,DOK3,DDX41	-1733,-63885,-2302,-1733,4611
chr22:48884231-48884523	chr22	+	48884398	48884503	True	NR_033377,NM_001082967	chr22,chr22	-,+	FLJ46257,FAM19A5	-857080,784
chr8:38245756-38246094	chr8	+	38245889	38245966	True	NM_017778,NM_001199660,NM_023034,NM_001199659,NM_144652	chr8,chr8,chr8,chr8,chr8	-,+,-,+,+	WHSC1L1,LETM2,WHSC1L1,LETM2,LETM2	-6099,-1299,-6099,-1989,-1989
chr14:21459780-21461278	chr14	+	21460139	21461317	True	NM_014579,NM_201538,NM_001029991,NR_033419,NM_022734	chr14,chr14,chr14,chr14,chr14	+,-,+,+,+	SLC39A2,NDRG2,METTL17,SLC39A2,METTL17	6096,31997,-2225,6096,-2225
chr19:33212919-33213183	chr19	+	33212931	33213205	True	NM_001110822,NM_032139	chr19,chr19	+,-	TDRD12,ANKRD27	-2316,-46829
chr14:90534350-90535264	chr14	+	90534446	90535238	True	NM_022054,NM_145231	chr14,chr14	+,-	KCNK13,EFCAB11	-6389,-113357
chr1:160320164-160321591	chr1	+	160320310	160321586	True	NM_004371,NM_015331,NM_001098398	chr1,chr1,chr1	-,+,-	COPA,NCSTN,COPA	-6956,-7299,-6956
chr2:25566937-25568169	chr2	+	25567265	25568029	True	NM_014971,NM_175630,NM_175629,NM_022552	chr2,chr2,chr2,chr2	+,-,-,-	EFR3B,DNMT3A,DNMT3A,DNMT3A	-302346,-1806,-1806,-2491
chr1:32042883-32043564	chr1	+	32042956	32043610	True	NM_001204414,NM_001204415,NM_022164,NR_033688	chr1,chr1,chr1,chr1	+,+,+,-	TINAGL1,TINAGL1,TINAGL1,PEF1	-921,135,-921,66658
chrX:154612627-154612916	chrX	+	154612718	154612964	True	NR_036049,NM_001007524,NM_001007523,NM_012151,NM_080720,NR_036260,NR_036259,NM_001017991,NM_001017990	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,-,-,+,+	MIR1184-1,F8A3,F8A2,F8A1,H2AFB3,MIR1184-3,MIR1184-2,H2AFB2,H2AFB1	-13,-1005,-1005,-1020,-2341,-13,-13,-2333,-2341
chrX:154612627-154612916	chrX	+	154115604	154115796	False	NR_036049,NM_001007524,NM_001007523,NM_012151,NM_080720,NR_036260,NM_019863,NR_036259,NM_001017990	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,-,-,-,+	MIR1184-1,F8A3,F8A2,F8A1,H2AFB3,MIR1184-3,F8,MIR1184-2,H2AFB1	-13,-1005,-1005,-1020,-2338,-13,-1027,-13,-2338
chrX:154612627-154612916	chrX	-	154687060	154687306	False	NR_036049,NM_001007524,NM_001007523,NM_012151,NM_080720,NR_036260,NR_036259,NM_001017991,NM_001017990	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,-,-,-,-,+,+,-,-	MIR1184-1,F8A3,F8A2,F8A1,H2AFB3,MIR1184-3,MIR1184-2,H2AFB2,H2AFB1	13,1005,1005,1020,2340,13,13,2332,2340
chr3:119298980-119299227	chr3	+	119299015	119299265	True	NM_005191,NM_001125	chr3,chr3	-,+	CD80,ADPRH	-20534,-543
chr1:45140356-45141486	chr1	+	45140428	45140956	True	NM_001145636,NM_024587	chr1,chr1	+,-	C1orf228,TMEM53	-85,-329
chr2:62932236-62932664	chr2	+	62932263	62932629	True	NM_198276,NM_001142616,NM_001142614,NM_015252	chr2,chr2,chr2,chr2	-,+,+,+	TMEM17,EHBP1,EHBP1,EHBP1	-198659,371,1402,371
chr12:121477918-121478562	chr12	+	121478012	121478596	True	NM_198213,NM_003733,NM_000545	chr12,chr12,chr12	-,-,+	OASL,OASL,HNF1A	-1232,-1232,-61516
chr22:44420620-44421020	chr22	+	44420669	44420962	True	NM_013327,NM_138814	chr22,chr22	+,-	PARVB,PNPLA5	-552,-132776
chr22:50683996-50684220	chr22	+	50684079	50684245	True	NM_032019,NM_031454,NM_001159286,NM_020461	chr22,chr22,chr22,chr22	-,+,-,-	HDAC10,SELO,HDAC10,TUBGCP6	5639,-44722,5639,-679
chr7:140858277-140860137	chr7	+	140858350	140860108	True	NM_053035,NM_001195278	chr7,chr7	-,+	MRPS33,LOC100131199	-143569,-84369
chr20:48788237-48789003	chr20	+	48788269	48789019	True	NR_027889,NM_005194	chr20,chr20	-,+	TMEM189,CEBPB	-17934,18356
chr5:169727918-169729010	chr5	+	169728218	169729056	True	NM_005565,NR_026945	chr5,chr5	-,+	LCP2,LOC257358	-3396,29378
chr4:166794265-166794544	chr4	+	166794264	166794563	True	NM_001204760,NR_026575,NM_012464	chr4,chr4,chr4	+,-,+	TLL1,GK3P,TLL1	-44,-593089,-44
chr2:162480961-162482206	chr2	+	162481073	162482009	True	NM_001178015,NM_001178016,NM_022058,NM_001935	chr2,chr2,chr2,chr2	+,+,+,-	SLC4A10,SLC4A10,SLC4A10,DPP4	-280,-280,-280,449093
chr2:177028226-177028453	chr2	+	177028239	177028491	True	NR_033979,NM_006898	chr2,chr2	-,+	LOC401022,HOXD3	25245,313
chr3:129158825-129159334	chr3	+	129158842	129159216	True	NM_052985,NM_018262,NM_003925,NM_052990,NM_052989	chr3,chr3,chr3,chr3,chr3	+,+,-,+,+	IFT122,IFT122,MBD4,IFT122,IFT122	75,75,10,75,75
chr19:14494036-14494536	chr19	+	14494446	14494558	True	NM_078481,NM_001025160,NM_001204057,NM_001784	chr19,chr19,chr19,chr19	+,+,-,+	CD97,CD97,DDX39A,CD97	-2284,-2284,35398,-2284
chr5:139783435-139784303	chr5	+	139783476	139783818	True	NM_024668,NM_017747,NM_020690,NM_017978,NM_001945,NM_001197030	chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,-,+	ANKHD1,ANKHD1,ANKHD1-EIF4EBP3,ANKHD1,HBEGF,ANKHD1	-2136,-2136,-2136,-2136,-57288,-2136
chr18:56810089-56810439	chr18	+	56810140	56810313	True	NM_033280,NM_013435	chr18,chr18	+,-	SEC11C,RAX	-3077,130363
chr22:24200137-24201769	chr22	+	24200180	24201483	True	NM_198440,NM_001024939,NM_001024938,NM_030807	chr22,chr22,chr22,chr22	-,+,+,+	DERL3,SLC2A11,SLC2A11,SLC2A11	-18981,-190,-1172,-1172
chr13:45010052-45010971	chr13	+	45010054	45010918	True	NM_001010897,NM_006022	chr13,chr13	+,-	SERP2,TSC22D1	-62127,111
chr21:44848138-44848554	chr21	+	44848143	44848465	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	21438,-1141
chr3:30908654-30910466	chr3	+	30908653	30910499	True	NM_207359,NM_003242	chr3,chr3	-,+	GADL1,TGFBR2	25704,-260713
chr16:81530776-81531198	chr16	+	81530855	81531225	True	NM_001076780,NM_030629	chr16,chr16	-,+	PKD1L2,CMIP	-276880,-1952
chr4:144259051-144260518	chr4	+	144259281	144260358	True	NM_001168235,NM_207123,NM_002039	chr4,chr4,chr4	-,+,+	FREM3,GAB1,GAB1	361527,-1350,-1350
chr7:44926297-44928268	chr7	+	44926431	44927746	True	NM_033224,NM_021130	chr7,chr7	-,+	PURB,PPIA	-1471,-90250
chr7:100844788-100845191	chr7	+	100845012	100845190	True	NM_178176,NM_006349	chr7,chr7	-,+	MOGAT3,ZNHIT1	-710,15794
chr13:38170094-38170842	chr13	+	38170297	38170886	True	NM_001135934,NM_001135935,NM_001135936,NM_006475,NM_181503	chr13,chr13,chr13,chr13,chr13	-,-,-,-,+	POSTN,POSTN,POSTN,POSTN,EXOSC8	2152,2152,2152,2152,-595675
chr5:140995232-140995454	chr5	+	140995327	140995472	True	NM_005219,NM_001130029,NM_001079812	chr5,chr5,chr5	-,+,-	DIAPH1,RELL2,DIAPH1	3201,21044,3201
chr2:9615787-9616070	chr2	+	9615990	9616109	True	NM_001039613,NM_022334	chr2,chr2	+,-	IAH1,ITGB1BP1	-1371,-52347
chr5:10612159-10613313	chr5	+	10612172	10613358	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-47802,148079
chr4:174252408-174253417	chr4	+	174252556	174253472	True	NM_003864,NM_001130689,NM_001130688,NM_002129	chr4,chr4,chr4,chr4	+,-,-,-	SAP30,HMGB2,HMGB2,HMGB2	38620,1507,2096,2182
chr3:21710251-21711999	chr3	+	21710525	21712031	True	NR_002311,NM_024697	chr3,chr3	+,-	VENTXP7,ZNF385D	-263363,80835
chrX:54559184-54560702	chrX	+	54559413	54560692	True	NM_004463,NM_019067,NM_001184819	chrX,chrX,chrX	-,+,+	FGD1,GNL3L,GNL3L	-36814,-2833,-2833
chr7:27134174-27134600	chr7	+	27134188	27134635	True	NM_005522,NM_153620,NM_006735,NR_002795	chr7,chr7,chr7,chr7	-,-,-,+	HOXA1,HOXA1,HOXA2,HOXA11-AS1	1043,1043,7812,90391
chr1:41708371-41710206	chr1	+	41708439	41710032	True	NM_012236,NM_001172218,NM_001172219,NR_037868,NM_001172220	chr1,chr1,chr1,chr1,chr1	-,-,-,+,-	SCMH1,SCMH1,SCMH1,LOC100507178,SCMH1	-624,-624,-624,-228228,-624
chr11:68816900-68818252	chr11	+	68816917	68818199	True	NM_139075,NM_145015	chr11,chr11	+,-	TPCN2,MRGPRF	-618,-36067
chr6:26250732-26251145	chr6	+	26250789	26251185	True	NM_003547,NM_021018,NM_003524	chr6,chr6,chr6	-,-,+	HIST1H4G,HIST1H3F,HIST1H2BH	-3584,46,693
chr19:54695743-54696058	chr19	+	54695757	54695925	True	NM_001146056,NM_001146082,NM_001146083,NM_024075,NM_024298,NM_001013,NM_001077446	chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,+,-,+,+	MBOAT7,MBOAT7,MBOAT7,TSEN34,MBOAT7,RPS9,TSEN34	-2024,-2024,-2024,-1689,-2024,8800,-704
chr20:1967818-1968947	chr20	+	1967836	1968812	True	NM_001190900,NM_001190892,NM_001040023,NM_024411,NM_001190898,NM_001190899	chr20,chr20,chr20,chr20,chr20,chr20	-,-,+,-,-,-	PDYN,PDYN,SIRPA,PDYN,PDYN,PDYN	5632,4690,-92073,6169,6169,6169
chr20:61568768-61568977	chr20	+	61568796	61569010	True	NM_033081,NM_017896,NM_022105,NM_080797	chr20,chr20,chr20,chr20	-,+,-,-	DIDO1,C20orf11,DIDO1,DIDO1	344,430,344,344
chr8:42749173-42749426	chr8	+	42749227	42749431	True	NM_001160223,NM_001160224,NM_001160225,NM_032410,NM_030954,NR_027669,NR_027668	chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,+,-,-,-	RNF170,RNF170,RNF170,HOOK3,RNF170,RNF170,RNF170	2485,2485,2485,2601,2485,2485,2485
chr8:38243070-38243611	chr8	+	38243313	38243657	True	NM_017778,NM_001199660,NM_023034,NM_001199659,NM_144652	chr8,chr8,chr8,chr8,chr8	-,+,-,+,+	WHSC1L1,LETM2,WHSC1L1,LETM2,LETM2	-3523,991,-3523,301,301
chr18:44703451-44705286	chr18	+	44703604	44704918	True	NM_016097,NM_031303	chr18,chr18	-,+	IER3IP1,KATNAL2	-859,-176880
chr16:57315631-57317114	chr16	+	57315734	57317002	True	NM_015993,NM_012106	chr16,chr16	-,+	PLLP,ARL2BP	1633,-36754
chr20:31406431-31406795	chr20	+	31406571	31406839	True	NM_012325,NM_053041	chr20,chr20	+,-	MAPRE1,COMMD7	859,-74757
chr17:66101497-66102619	chr17	+	66101720	66102496	True	NM_181656,NR_027418	chr17,chr17	-,+	C17orf58,LOC100499466	-111955,-4078
chr11:58362297-58363203	chr11	+	58362355	58362843	True	NM_001143995,NR_024091	chr11,chr11	-,+	LPXN,ZFP91-CNTF	-16716,-15826
chr2:62944805-62946259	chr2	+	62945005	62946108	True	NM_198276,NM_001142614	chr2,chr2	-,+	TMEM17,EHBP1	-211401,-11025
chr19:54605872-54606209	chr19	+	54605883	54606223	True	NM_133169,NM_130771,NM_206818,NM_004542,NM_133168	chr19,chr19,chr19,chr19,chr19	-,-,-,+,-	OSCAR,OSCAR,OSCAR,NDUFA3,OSCAR	-1735,-1735,-1735,-64,-1735
chr8:120079947-120081389	chr8	+	120080005	120081361	True	NM_002546,NM_006438	chr8,chr8	-,+	TNFRSF11B,COLEC10	-115622,-640
chr7:129937839-129939308	chr7	+	129938105	129939261	True	NM_032842,NM_001163446,NM_016352	chr7,chr7,chr7	-,+,+	TMEM209,CPA4,CPA4	-92767,-5184,-5184
chr15:62934634-62934991	chr15	+	62934654	62934850	True	NM_015059,NR_026897	chr15,chr15	+,-	TLN2,MGC15885	4659,2592
chr1:187580830-187581595	chr1	+	187580891	187581392	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-931332,-782916
chr12:133656823-133657197	chr12	+	133656867	133657227	True	NM_003440,NM_001164715	chr12,chr12	+,-	ZNF140,ZNF605	57,-123975
chr3:183545464-183545886	chr3	+	183545469	183545721	True	NM_024871,NM_018023	chr3,chr3	-,+	MAP6D1,YEATS2	-2076,-129914
chr22:22986527-22987021	chr22	+	22986695	22986775	True	NM_199127,NR_024591	chr22,chr22	+,-	GGTLC2,POM121L1P	2006,287
chr2:176962365-176962671	chr2	+	176962495	176962675	True	NM_001080458,NM_000523,NM_021192,NM_021193	chr2,chr2,chr2,chr2	-,+,+,+	EVX2,HOXD13,HOXD11,HOXD12	-13805,-5014,9408,1854
chrX:30671271-30671478	chrX	+	30671333	30671401	True	NM_203391,NM_000167,NM_001205019,NM_025159,NM_001128127	chrX,chrX,chrX,chrX,chrX	+,+,+,-,+	GK,GK,GK,CXorf21,GK	74,74,74,-75300,74
chr22:31556133-31556349	chr22	+	31556203	31556277	True	NR_024209,NR_037496,NM_001135825,NR_024211,NR_024210,NR_024212,NM_152267	chr22,chr22,chr22,chr22,chr22,chr22,chr22	+,-,+,+,+,+,+	RNF185,MIR3928,RNF185,RNF185,RNF185,RNF185,RNF185	-116,-98,-116,-116,-116,-116,-116
chr22:41634959-41635341	chr22	+	41634959	41635248	True	NM_138481,NM_031488	chr22,chr22	-,+	CHADL,L3MBTL2	1748,-33697
chr3:197514268-197515021	chr3	+	197514279	197514817	True	NM_001145642,NM_032773	chr3,chr3	-,+	KIAA0226,LRCH3	-37711,3327
chr12:64844154-64845522	chr12	+	64844538	64845477	True	NM_001170633,NM_013254	chr12,chr12	-,+	C12orf56,TBK1	-60193,362
chr17:4845134-4845698	chr17	+	4845279	4845747	True	NM_001165418,NM_053013,NM_005022,NM_001165417,NM_003562,NM_001193503,NM_001976,NM_000173,NM_015528	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,-,-,-,+,+,+,+	SLC25A11,ENO3,PFN1,SLC25A11,SLC25A11,ENO3,ENO3,GP1BA,RNF167	-1817,8636,6128,-1817,-1817,8636,8636,-9745,-1707
chr8:133121575-133122127	chr8	+	133121718	133122077	True	NM_015137,NM_001145095	chr8,chr8	+,-	EFR3A,HHLA1	-205416,-4206
chr1:24152327-24153140	chr1	+	24152533	24152809	True	NM_000191,NM_001166059,NM_007260	chr1,chr1,chr1	-,-,+	HMGCL,HMGCL,LYPLA2	-584,-584,-34946
chr3:188886082-188887112	chr3	+	188886388	188886927	True	NM_198485,NM_018192	chr3,chr3	+,-	TPRG1,LEPREL1	2835,952040
chr5:70669044-70669300	chr5	+	70669051	70669315	True	NR_003922,NR_033968	chr5,chr5	+,-	PMCHL2,LOC100049076	2296,-113929
chr5:70669044-70669300	chr5	+	22139904	22140152	False	NR_003921,NM_004061	chr5,chr5	+,-	PMCHL1,CDH12	2308,713629
chr3:185306272-185306795	chr3	+	185306384	185306832	True	NM_021627,NM_139248	chr3,chr3	+,-	SENP2,LIPH	-2406,-36015
chrX:136647039-136647531	chrX	+	136647153	136647557	True	NM_054021,NM_003413	chrX,chrX	-,+	GPR101,ZIC3	-533320,788
chr11:94943367-94944856	chr11	+	94943568	94944436	True	NM_144665,NM_015036	chr11,chr11	-,+	SESN3,ENDOD1	19860,-120645
chrX:91034247-91034510	chrY	+	4868298	4868522	False	NM_032971,NR_001540	chrY,chrY	+,-	PCDH11Y,TTTY23	-82,1243179
chrX:91034247-91034510	chrX	+	91034335	91034559	True	NM_032967,NM_004538	chrX,chrX	+,-	PCDH11X,NAP1L3	-126,1894173
chr6:50681783-50682333	chr6	+	50681898	50682372	True	NM_172238,NM_001037498	chr6,chr6	+,-	TFAP2D,DEFB112	-696,-665534
chr7:116830407-116830828	chr7	+	116830438	116830844	True	NR_002332,NR_002331	chr7,chr7	+,-	ST7OT3,ST7OT2	-7754,-44824
chr16:58007209-58008451	chr16	+	58007331	58008115	True	NM_001297,NM_199456,NM_199046,NM_001135639	chr16,chr16,chr16,chr16	-,+,+,-	CNGB1,TEPP,TEPP,CNGB1	-2311,2223,2223,-2311
chr6:168851372-168851874	chr6	+	168851411	168851735	True	NM_214462,NM_001166412,NM_022138	chr6,chr6,chr6	-,+,+	DACT2,SMOC2,SMOC2	-131009,-9631,-9631
chr19:58898226-58898532	chr19	+	58898344	58898578	True	NM_138466,NM_001009,NM_001195135,NM_001129730	chr19,chr19,chr19,chr19	-,+,+,-	ZNF837,RPS5,LOC646862,ZNF837	-5955,57,8878,-5955
chr18:24734480-24735851	chr18	+	24734533	24735863	True	NR_026908,NM_031422	chr18,chr18	+,-	C18orf16,CHST9	-289323,29477
chr15:101421130-101421993	chr15	+	101421235	101421903	True	NM_001040616,NM_000693	chr15,chr15	-,+	LINS,ALDH1A3	-278790,-1279
chr20:36973584-36975001	chr20	+	36974056	36975050	True	NM_004139,NR_002910	chr20,chr20	+,-	LBP,SNORA71B	104,78978
chr12:110877357-110878442	chr12	+	110877796	110878307	True	NM_005719,NM_013300	chr12,chr12	-,+	ARPC3,C12orf24	9909,27924
chrX:153656619-153656928	chrX	+	153656726	153656919	True	NM_001009934,NM_001493,NM_001183	chrX,chrX,chrX	-,+,+	DNASE1L1,GDI1,ATP6AP1	-16299,8339,58
chr13:73634474-73634771	chr13	+	73634551	73634747	True	NM_001730,NM_014953	chr13,chr13	+,-	KLF5,DIS3	-1460,-278207
chr11:63305435-63305931	chr11	+	63305759	63305974	True	NM_017878,NM_004585	chr11,chr11	-,+	HRASLS2,RARRES3	24932,-1537
chr11:13695778-13697093	chr11	+	13696182	13697138	True	NM_032228,NM_000315	chr11,chr11	+,-	FAR1,PTH	-6028,-178615
chr1:201442105-201443084	chr1	+	201442423	201442914	True	NM_012396,NR_026667	chr1,chr1	-,+	PHLDA3,RPS10P7	-4124,46117
chr1:1311026-1311689	chr1	+	1311383	1311675	True	NM_001127230,NM_017900,NM_001127229,NR_015434	chr1,chr1,chr1,chr1	-,-,-,+	AURKAIP1,AURKAIP1,AURKAIP1,LOC148413	-821,-565,-803,23234
chr20:61438180-61438954	chr20	+	61438659	61438971	True	NM_007346,NM_001853,NM_006602	chr20,chr20,chr20	+,+,-	OGFR,COL9A3,TCFL5	-2533,9442,54194
chr7:128378834-128379200	chr7	+	128378901	128379089	True	NM_001219,NM_001199674,NM_001199671,NM_001199673,NM_001199672,NM_001708,NM_001130674	chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,+,-,+	CALU,CALU,CALU,CALU,CALU,OPN1SW,CALU	256,256,256,256,256,36805,256
chr1:150239951-150240442	chr1	+	150239950	150240468	True	NM_024579,NM_016022,NM_001077628,NM_012113	chr1,chr1,chr1,chr1	+,-,-,+	C1orf54,APH1A,APH1A,CA14	4714,1114,1114,-9783
chr5:160975381-160975898	chr5	+	160975531	160975799	True	NM_000811,NM_021911,NM_000813	chr5,chr5,chr5	+,-,-	GABRA6,GABRB2,GABRB2	136858,-401,-401
chr2:31783625-31785569	chr2	+	31783858	31785590	True	NM_014600,NM_000348	chr2,chr2	+,-	EHD3,SRD5A2	-327036,20502
chr17:7453288-7453789	chr17	+	7453378	7453776	True	NM_172087,NM_003808,NM_003809,NM_172089,NM_172088,NM_006942,NM_001198624,NM_001198623,NM_001198622,NR_037146	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,-,+,+,+,+	TNFSF13,TNFSF13,TNFSF12,TNFSF12-TNFSF13,TNFSF13,SOX15,TNFSF13,TNFSF13,TNFSF13,TNFSF12	7832,7832,-1055,-1055,7832,39762,7832,7832,7832,-1055
chr7:102036479-102036788	chr7	+	102036560	102036816	True	NM_024653,NM_001146210	chr7,chr7	+,-	PRKRIP1,SPDYE6	-13,-39671
chr17:79355946-79356222	chr17	+	79355975	79356101	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	17438,-51501
chr8:123795025-123796404	chr8	+	123795400	123796397	True	NM_014943,NM_001134671	chr8,chr8	+,-	ZHX2,DERL1	-1550,258302
chr12:120635777-120636042	chr12	+	120635811	120635879	True	NM_053275,NM_012240,NM_006836,NM_001002	chr12,chr12,chr12,chr12	-,+,-,-	RPLP0,SIRT4,GCN1L1,RPLP0	3185,104244,-3298,3185
chr6:43654950-43655282	chr6	+	43655019	43655327	True	NM_152732,NM_018135,NM_001193343	chr6,chr6,chr6	+,-,-	RSPH9,MRPS18A,MRPS18A	-42303,272,272
chr9:98277927-98278141	chr9	+	98277947	98278113	True	NM_001010895,NM_001083607,NM_001083602,NM_001083603,NM_001083604,NM_001083605,NM_001083606,NM_000264	chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9	+,-,-,-,-,-,-,-	C9orf102,PTCH1,PTCH1,PTCH1,PTCH1,PTCH1,PTCH1,PTCH1	359786,-8466,1184,1184,-7625,-7625,-8248,-7116
chr8:38033126-38033419	chr8	+	38033228	38033452	True	NM_001204878,NM_004874,NM_014462	chr8,chr8,chr8	+,+,-	BAG4,BAG4,LSM1	653,653,624
chr6:3073977-3075211	chr6	+	3074098	3075260	True	NR_033884,NM_003804	chr6,chr6	-,+	LOC401233,RIPK1	-49093,1797
chr3:93747081-93748282	chr3	+	93747235	93747591	True	NM_022072,NM_001001850	chr3,chr3	+,-	NSUN3,STX19	34263,-55
chr19:2235413-2235684	chr19	+	2235521	2235647	True	NR_031596,NM_007165,NM_018049	chr19,chr19,chr19	-,+,-	MIR1227,SF3A2,PLEKHJ1	-1373,1168,731
chr19:7895576-7895950	chr19	+	7895658	7895988	True	NM_145245,NM_001190467	chr19,chr19	+,-	EVI5L,FLJ22184	-548,43388
chr3:49464091-49464474	chr3	+	49464251	49464475	True	NR_028435,NM_022171,NM_000481,NM_032316,NM_001164712,NM_001164710,NM_001164711	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-,-	AMT,TCTA,AMT,NICN1,AMT,AMT,AMT	-4140,-14663,-4140,2332,-4140,-4140,-4140
chrX:52238713-52238995	chrX	+	52238713	52239043	True	NM_133430,NR_033251,NR_033253,NM_001097596,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_020411,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,+,+,+,+,+,+,+,+,+,+	XAGE1D,XAGE1C,XAGE1A,XAGE1B,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1D,XAGE1C	23,-25,-25,23,-25,-25,-25,23,38,23,38,38,38,38,23
chrX:52238713-52238995	chrX	-	52260129	52260459	False	NM_133430,NR_033251,NR_033253,NM_001097596,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_020411,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,-,-,-,-,-,-,-,-,-,-	XAGE1D,XAGE1C,XAGE1A,XAGE1B,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1D,XAGE1C	-23,25,25,-23,25,25,25,-23,-38,-23,-38,-38,-38,-38,-23
chrX:52238713-52238995	chrX	+	52511664	52511994	False	NM_133430,NR_033251,NR_033253,NM_001097596,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_020411,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,+,+,+,+,+,+,+,+,+,+	XAGE1D,XAGE1C,XAGE1A,XAGE1B,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1D,XAGE1C	23,-25,-25,23,-25,-25,-25,23,38,23,38,38,38,38,23
chrX:52238713-52238995	chrX	-	52533069	52533399	False	NM_133430,NR_033251,NR_033253,NM_001097596,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_020411,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,-,-,-,-,-,-,-,-,-,-	XAGE1D,XAGE1C,XAGE1A,XAGE1B,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1D,XAGE1C	-23,25,25,-23,25,25,25,-23,-38,-23,-38,-38,-38,-38,-23
chrX:52238713-52238995	chrX	-	52545963	52546293	False	NM_133430,NR_033251,NR_033253,NM_001097596,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_020411,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,-,-,-,-,-,-,-,-,-,-	XAGE1D,XAGE1C,XAGE1A,XAGE1B,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1D,XAGE1C	-23,25,25,-23,25,25,25,-23,-38,-23,-38,-38,-38,-38,-23
chr6:10583600-10584285	chr6	+	10583657	10584333	True	NM_001145020,NM_145655	chr6,chr6	-,+	C6orf52,GCNT2	110556,1659
chr9:111929480-111929738	chr9	+	111929484	111929680	True	NM_014334,NM_017832	chr9,chr9	-,+	C9orf4,C9orf6	-51,-232862
chrX:9753234-9753678	chrX	+	9753239	9753551	True	NM_000273,NM_001649	chrX,chrX	-,+	GPR143,SHROOM2	-19234,944
chr12:7076233-7077163	chr12	+	7076234	7077106	True	NR_029779,NM_007273,NR_029682,NM_001144831,NR_003010,NM_006331	chr12,chr12,chr12,chr12,chr12,chr12	+,-,+,-,-,+	MIR200C,PHB2,MIR141,PHB2,SCARNA12,EMG1	-3423,2835,-3025,2860,-101,2837
chr2:208492055-208493126	chr2	+	208492116	208492862	True	NM_145280,NM_001127395,NM_001142300	chr2,chr2,chr2	-,-,+	METTL21A,METTL21A,CCNYL1	-2420,-2143,83401
chr5:32172889-32173479	chr5	+	32173140	32173436	True	NM_022130,NM_178140	chr5,chr5	-,+	GOLPH3,PDZD2	1041,-374161
chrY:27629335-27629843	chrY	+	27629337	27629697	True	NR_002179,NR_001554	chrY,chrY	-,+	TTTY17C,CSPG4P1Y	-298417,-333
chrY:27629335-27629843	chrY	-	26332735	26333095	False	NR_001526,NR_001554	chrY,chrY	+,-	TTTY17A,CSPG4P1Y	298383,333
chr4:22518111-22520103	chr4	+	22518176	22519966	True	NM_001128432,NM_145290	chr4,chr4	+,-	GBA3,GPR125	174581,-504
chr16:4784382-4784828	chr16	+	4784382	4784862	True	NM_133450,NM_139170	chr16,chr16	-,+	ANKS3,C16orf71	-219,-144
chr9:139848626-139848892	chr9	+	139848664	139848806	True	NM_000606,NM_018998,NM_178536	chr9,chr9,chr9	+,-,+	C8G,FBXW5,LCN12	-9017,-9491,-1947
chr22:50625924-50626331	chr22	+	50625952	50626022	True	NM_025204,NM_020461	chr22,chr22	+,-	TRABD,TUBGCP6	-1643,57428
chr5:177433482-177433735	chr5	+	177433699	177433761	True	NM_006261,NM_001079527	chr5,chr5	-,+	PROP1,FAM153C	-10456,1927
chr1:213025853-213027383	chr1	+	213026029	213027211	True	NM_014053,NM_001024601,NR_027286,NR_027285	chr1,chr1,chr1,chr1	+,-,-,-	FLVCR1,C1orf227,NCRNA00292,NCRNA00292	4385,-5038,4319,4319
chr9:118691942-118693843	chr9	+	118692109	118693650	True	NM_002581,NR_024032	chr9,chr9	+,-	PAPPA,C9orf27	222420,-4732
chr10:116167872-116168554	chr10	+	116167970	116168590	True	NM_198496,NM_032550,NM_001001936	chr10,chr10,chr10	+,-,-	VWA2,AFAP1L2,AFAP1L2	-169003,-3455,-3455
chr19:53194707-53195764	chr19	+	53194827	53195543	True	NR_003936,NR_023311	chr19,chr19	-,+	ZNF83,ZNF137P	-941,-94947
chr17:56297358-56297904	chr17	+	56297376	56297797	True	NM_001165927,NM_017777,NM_001160102	chr17,chr17,chr17	-,-,+	MKS1,MKS1,LPO	-410,-710,17989
chr6:150285885-150286108	chr6	+	150285899	150286131	True	NR_024045,NM_025218	chr6,chr6	-,+	RAET1K,ULBP1	40199,-807
chr6:150285885-150286108	chr6	+	150285759	150285809	False	NR_024045,NM_025218	chr6,chr6	-,+	RAET1K,ULBP1	40521,-667
chr19:39390128-39390398	chr19	+	39390172	39390424	True	NM_002503,NM_030593,NM_001001716,NM_012237,NR_034146,NM_001193286	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,-,-,-	NFKBIB,SIRT2,NFKBIB,SIRT2,SIRT2,SIRT2	190,128,190,89,-5377,128
chr3:49236110-49236326	chr3	+	49236173	49236309	True	NM_178173,NM_001080528,NM_001135197	chr3,chr3,chr3	+,-,+	CCDC36,LOC646498,CCDC36	-369,-6882,623
chr11:33097049-33097661	chr11	+	33097075	33097631	True	NR_015451,NM_001326	chr11,chr11	+,-	NCRNA00294,CSTF3	64,85458
chr12:101992091-101992475	chr12	+	101992090	101992341	True	NM_206821,NM_206819,NM_001177948,NM_002465,NM_206820	chr12,chr12,chr12,chr12,chr12	+,+,-,+,+	MYBPC1,MYBPC1,SYCP3,MYBPC1,MYBPC1	-3397,-3397,140964,-3397,-3397
chr7:73589313-73589902	chr7	+	73589381	73589927	True	NM_002914,NM_031992,NM_022170	chr7,chr7,chr7	-,+,+	RFC2,EIF4H,EIF4H	78861,-726,-726
chr11:75522228-75523174	chr11	+	75522441	75522884	True	NM_003369,NM_207577	chr11,chr11	+,-	UVRAG,MAP6	3327,-142962
chr1:150850617-150851311	chr1	+	150850626	150851036	True	NM_001197325,NM_001145415,NM_001668,NM_178427	chr1,chr1,chr1,chr1	-,+,-,-	ARNT,SETDB1,ARNT,ARNT	-1382,47778,-1382,-1382
chr22:44423248-44423632	chr22	+	44423254	44423464	True	NM_013327,NM_138814	chr22,chr22	+,-	PARVB,PNPLA5	-3137,-135361
chr16:836049-836282	chr16	+	836117	836321	True	NM_001025190,NM_058192,NM_022092	chr16,chr16,chr16	-,-,+	MSLNL,RPUSD1,CHTF18	-3191,2112,2300
chr20:2084800-2085657	chr20	+	2084836	2085453	True	NM_080836,NM_024411	chr20,chr20	+,-	STK35,PDYN	-2366,-109905
chr7:38315923-38316652	chr7	+	38315947	38316353	True	NM_001003806,NM_032016,NM_001003799	chr7,chr7,chr7	-,+,-	TARP,STARD3NL,TARP	-2699,-98065,-2699
chr14:92570989-92572188	chr14	+	92571293	92572215	True	NM_001164776,NM_001164777,NR_028453,NR_028457,NR_028456,NR_028455,NR_028454,NM_001164778,NM_001164779,NR_028459,NR_028458,NR_028470,NM_017437,NR_031765,NM_001164781,NM_001164780,NM_001164782,NM_004993,NR_028468,NR_028469,NR_028466,NR_028467,NR_028464,NR_028465,NR_028462,NR_028463,NR_028460,NR_028461,NM_030660,NM_001127696,NM_001127697,NM_001164774	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	-,-,-,-,-,-,-,-,-,-,-,-,+,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-	ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,CPSF2,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3	800,800,800,800,800,800,800,800,800,800,800,800,16082,800,800,800,800,800,800,800,800,800,800,800,800,800,800,800,800,800,800,800
chr15:83854312-83855280	chr15	+	83854375	83855154	True	NM_016073,NM_023003	chr15,chr15	-,+	HDGFRP3,TM6SF1	21228,-78104
chr2:98612248-98612483	chr2	+	98612275	98612501	True	NM_015348,NM_144992	chr2,chr2	-,+	TMEM131,VWA3B	37,91093
chr13:114020065-114020736	chr13	+	114020249	114020675	True	NM_024719,NM_005561	chr13,chr13	-,+	GRTP1,LAMP1	-1786,-68831
chr9:34521190-34521775	chr9	+	34521211	34521787	True	NR_024369,NM_198573	chr9,chr9	+,-	LOC415056,ENHO	46222,1300
chr5:135382982-135384126	chr5	+	135383056	135384142	True	NM_000358,NR_030583	chr5,chr5	+,-	TGFBI,VTRNA2-1	-18523,32194
chr12:129297023-129298003	chr12	+	129297174	129297997	True	NM_145648,NM_144669	chr12,chr12	-,+	SLC15A4,GLT1D1	10594,40083
chr10:71213999-71214651	chr10	+	71214225	71214672	True	NM_001057,NM_012339	chr10,chr10	-,+	TACR2,TSPAN15	-37551,-3050
chr20:62104022-62104451	chr20	+	62104392	62104500	True	NM_172106,NM_172107,NM_024299,NM_172108,NM_172109,NM_004518	chr20,chr20,chr20,chr20,chr20,chr20	-,-,+,-,-,-	KCNQ2,KCNQ2,PPDPF,KCNQ2,KCNQ2,KCNQ2	-399,-399,47632,-399,-399,-399
chr12:68041968-68042178	chr12	+	68041971	68042127	True	NM_003583,NM_000619,NM_006482	chr12,chr12,chr12	+,-,+	DYRK2,IFNG,DYRK2	384,511444,384
chr18:32873286-32873938	chr18	+	32873319	32873980	True	NM_001112734,NR_024565,NM_001166012,NR_024566	chr18,chr18,chr18,chr18	-,+,-,+	ZSCAN30,ZNF271,ZSCAN30,ZNF271	-3123,-3134,-3123,-3134
chrX:15501215-15502731	chrX	+	15501385	15502313	True	NR_037859,NM_003662,NM_001018109,NM_203281	chrX,chrX,chrX,chrX	-,-,-,+	PIR-FIGF,PIR,PIR,BMX	7171,9450,9450,16586
chr16:75588182-75588725	chr16	+	75588491	75588666	True	NM_001077418,NM_001077419,NM_001077416,NM_007285	chr16,chr16,chr16,chr16	-,-,-,+	TMEM231,TMEM231,TMEM231,GABARAPL2	1567,1567,1533,11582
chr9:39719103-39721067	chr9	+	39719616	39720762	True	NR_003528,NM_001085452	chr9,chr9	-,+	LOC653501,FAM75A1	-255090,164212
chr9:39719103-39721067	chr9	+	39190314	39191460	False	NM_033655,NM_001085452	chr9,chr9	-,+	CNTNAP3,FAM75A1	96898,164238
chr12:53850513-53850735	chr12	+	53850549	53850721	True	NM_001128911,NM_001128912,NM_001128913,NM_001128914,NM_031989,NM_005016,NM_001193511,NM_001098620	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,+,+,+,+,-,+	PCBP2,PCBP2,PCBP2,PCBP2,PCBP2,PCBP2,MAP3K12,PCBP2	-4714,-4714,-4714,-4714,-4714,-4714,42781,-4714
chr6:46702482-46702788	chr6	+	46702652	46702728	True	NM_001162435,NM_001168357,NM_005084	chr6,chr6,chr6	+,-,-	LOC100287718,PLA2G7,PLA2G7	11925,752,473
chr22:33396257-33396902	chr22	+	33396324	33396946	True	NM_003490,NM_000362,NM_133633	chr22,chr22,chr22	-,+,-	SYN3,TIMP3,SYN3	5910,-199573,5910
chr1:211526410-211526636	chr1	+	211526436	211526682	True	NM_001164688,NM_145759	chr1,chr1	-,+	RD3,TRAF5	139627,-6797
chr9:116859683-116860099	chr9	+	116859866	116860124	True	NM_138424,NM_032888	chr9,chr9	-,+	KIF12,COL27A1	1263,58106
chr2:242212363-242212851	chr2	+	242212583	242212867	True	NM_203346,NM_001008491	chr2,chr2	-,+	HDLBP,SEPT2	-282,41855
chr3:194030704-194030935	chr3	+	194030786	194030874	True	NR_024480,NM_005524	chr3,chr3	-,+	LOC100131551,HES1	-193,-176913
chr5:88179194-88179976	chr5	+	88179198	88179901	True	NM_006467,NM_002397,NM_001193350	chr5,chr5,chr5	+,-,-	POLR3G,MEF2C,MEF2C	1590779,37,37
chr10:1778592-1778813	chr10	+	1778688	1778778	True	NR_033387,NM_018702	chr10,chr10	+,-	NCRNA00168,ADARB2	-209914,990
chr6:119662393-119663087	chr6	+	119662530	119663014	True	NM_005907,NM_014034	chr6,chr6	-,+	MAN1A1,ASF1A	7972,-447340
chr11:62455200-62455501	chr11	+	62455307	62455457	True	NM_203422,NM_015853,NM_001085372	chr11,chr11,chr11	-,-,+	LRRN4CL,UBXN1,C11orf83	1964,-8780,-16232
chr1:215277614-215279110	chr1	+	215277735	215278727	True	NM_014217,NM_005401	chr1,chr1	+,-	KCNK2,PTPN14	-21227,-552711
chr17:4462480-4462711	chr17	+	4462506	4462600	True	NM_198501,NM_001105538,NM_014520,NM_153338,NM_001122890	chr17,chr17,chr17,chr17,chr17	+,-,-,-,-	SMTNL2,MYBBP1A,MYBBP1A,GGT6,GGT6	24675,-3825,-3825,1326,1326
chr19:19726621-19728459	chr19	+	19726705	19728471	True	NM_025245,NM_033204	chr19,chr19	-,+	PBX4,ZNF101	1018,51191
chr12:113840095-113840412	chr12	+	113840380	113840450	True	NM_138432,NM_006843	chr12,chr12	+,-	SDSL,SDS	19765,1292
chr6:52929090-52929605	chr6	+	52929345	52929642	True	NM_012347,NM_014920,NM_033481,NM_033480,NM_016513	chr6,chr6,chr6,chr6,chr6	+,-,+,+,-	FBXO9,ICK,FBXO9,FBXO9,ICK	6128,-2745,153,614,-2745
chr9:93562198-93563707	chr9	+	93562534	93563685	True	NM_001174168,NM_001135052,NM_017594,NM_003177	chr9,chr9,chr9,chr9	+,+,-,+	SYK,SYK,DIRAS2,SYK	521,326,-157426,326
chr2:179074837-179075393	chr2	+	179075101	179075274	True	NM_032523,NM_001077197	chr2,chr2	+,-	OSBPL6,PDE11A	-15950,-102035
chr19:44259569-44260373	chr19	+	44259690	44260406	True	NM_019108,NM_019612	chr19,chr19	-,+	C19orf61,IRGC	-548,-39527
chr12:56509643-56510375	chr12	+	56510036	56510421	True	NM_032786,NM_001035267,NM_001130420,NM_021104	chr12,chr12,chr12,chr12	+,+,-,+	ZC3H10,RPL41,SMARCC2,RPL41	1608,-48,72980,-48
chr4:155309939-155310172	chr4	+	155310019	155310109	True	NM_017639,NM_001184741	chr4,chr4	-,+	DCHS2,FGB	2390,174022
chr4:113705797-113707238	chr4	+	113706053	113706482	True	NR_029857,NM_001127493	chr4,chr4	-,+	MIR302B,ANK2	-136340,32756
chr7:28725052-28725356	chr7	+	28725133	28725287	True	NM_014817,NM_001011666	chr7,chr7	-,+	TRIL,CREB5	272798,433
chr16:58549088-58549318	chr16	+	58549088	58549350	True	NM_001160305,NR_002978,NM_024860	chr16,chr16,chr16	+,-,+	SETD6,SNORA46,SETD6	32,33237,32
chr9:45362804-45363520	chr9	+	45362805	45363436	True	NM_001145196,NR_024060	chr9,chr9	-,+	FAM75A6,FAM27A	-1732075,363592
chr9:45362804-45363520	chr9	-	68371496	68371650	False	NR_033907,NR_034006	chr9,chr9	-,+	LOC642236,LOC100132352	82775,354890
chr9:45362804-45363520	chr9	+	66499969	66500123	False	NR_024443,NR_024496	chr9,chr9	-,+	LOC100133920,LOC442421	530923,-5751
chr16:4608047-4608470	chr16	+	4608061	4608347	True	NM_001145011,NM_013399	chr16,chr16	+,-	LOC342346,C16orf5	-1621,-19245
chr16:14927263-14927617	chr16	+	14927328	14927536	True	NR_023387,NM_014287	chr16,chr16	-,+	ABCC6P2,NOMO1	-8769,106
chr16:14927263-14927617	chr16	-	18573534	18573742	False	NM_001004060,NM_173614,NR_003569	chr16,chr16,chr16	-,-,+	NOMO2,NOMO2,ABCC6P1	-100,-100,8827
chr16:14927263-14927617	chr16	+	16326184	16326350	False	NM_001171,NM_001079528,NM_001004067	chr16,chr16,chr16	-,-,+	ABCC6,ABCC6,NOMO3	-8856,-8856,38
chr5:159617330-159617839	chr5	+	159617563	159617753	True	NM_001130958,NM_001040442,NM_001130864	chr5,chr5,chr5	+,+,-	FABP6,FABP6,PWWP2A	-3240,8294,-71111
chr15:44037131-44037667	chr15	+	44037205	44037633	True	NR_002318,NM_005313	chr15,chr15	-,+	CATSPER2P1,PDIA3	913,956
chr11:65684311-65684727	chr11	+	65684315	65684729	True	NM_031450,NM_001135635,NM_006442	chr11,chr11,chr11	-,-,+	C11orf68,C11orf68,DRAP1	1852,1852,1998
chr17:56768950-56769377	chr17	+	56769074	56769386	True	NM_031272,NM_002876,NM_198393,NM_001201457,NM_058216	chr17,chr17,chr17,chr17,chr17	-,+,-,-,+	TEX14,RAD51C,TEX14,TEX14,RAD51C	80,576,80,80,576
chr15:28567860-28568183	chr15	+	28567902	28567968	True	NM_004667,NR_033351	chr15,chr15	-,+	HERC2,GOLGA8F	-607,55815
chr15:28567860-28568183	chr15	-	28833946	28834012	False	NR_036443,NR_033351	chr15,chr15	+,-	HERC2P9,GOLGA8F	65575,-55803
chr15:28567860-28568183	chr15	+	20712030	20712096	False	NR_036432,NR_027411	chr15,chr15	-,+	HERC2P3,GOLGA8C	-597,55577
chr15:28567860-28568183	chr15	+	23378822	23378888	False	NR_002824,NR_036470	chr15,chr15	-,+	HERC2P2,HERC2P7	-563,11833
chr6:26027380-26027787	chr6	+	26027384	26027807	True	NM_005325,NM_003537,NM_003544,NM_003529,NM_003538,NM_003513	chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,+,+,-	HIST1H1A,HIST1H3B,HIST1H4B,HIST1H3A,HIST1H4A,HIST1H2AB	-9344,4534,38,-6717,-5528,6042
chr6:42929584-42930045	chr6	+	42929596	42930074	True	NM_018960,NM_000287	chr6,chr6	+,-	GNMT,PEX6	-1154,16957
chr20:4622846-4623510	chr20	+	4622845	4623432	True	NR_024267,NM_000311	chr20,chr20	-,+	PRNT,PRNP	97940,43364
chr9:130533814-130534099	chr9	+	130534014	130534082	True	NM_001142532,NR_036055,NM_001142531,NM_005489,NM_170600	chr9,chr9,chr9,chr9,chr9	-,+,-,-,-	SH2D3C,MIR2861,SH2D3C,SH2D3C,SH2D3C	-9317,14114,-9295,-393,7016
chr1:156085758-156086513	chr1	+	156085992	156086390	True	NM_001093725,NM_005572,NM_170707,NM_170708	chr1,chr1,chr1,chr1	-,+,+,+	MEX3A,LMNA,LMNA,LMNA	-34203,-1582,-1582,-1582
chr10:35417293-35417746	chr10	+	35417297	35417393	True	NM_182850,NM_182853,NM_181571,NM_183060,NM_001881,NM_001198777,NM_183012,NM_183013,NM_183011	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,-,+,+,+	CREM,CREM,CREM,CREM,CREM,CUL2,CREM,CREM,CREM	-1549,-1549,-962,-962,-1549,-37727,9316,-1549,9316
chrX:48166760-48168286	chrX	+	48166799	48167973	True	NM_021014,NM_005635	chrX,chrX	-,+	SSX3,SSX1	48220,-52053
chrX:48166760-48168286	chrX	+	52685739	52685790	False	NR_027250,NM_173358	chrX,chrX	+,-	SSX8,SSX7	-33806,-1789
chrX:48166760-48168286	chrX	+	48058060	48058487	False	NM_175723,NM_021015,NM_005635	chrX,chrX,chrX	-,-,+	SSX5,SSX5,SSX1	-1861,-1861,56309
chr1:763812-764500	chr1	+	764027	764332	True	NR_024321,NR_015368	chr1,chr1	-,+	NCRNA00115,LOC643837	-1125,-1017
chr10:70284557-70286277	chr10	+	70284823	70285396	True	NM_030625,NM_152707	chr10,chr10	+,-	TET1,SLC25A16	34720,1941
chr5:159659200-159660601	chr5	+	159659211	159660544	True	NM_001445,NM_024565	chr5,chr5	+,-	FABP6,CCNJL	-2826,79079
chr19:5565331-5565977	chr19	+	5565384	5565826	True	NM_001201338,NR_027064	chr19,chr19	+,-	SAFB,PLAC2	57219,2229
chr9:125592146-125593006	chr9	+	125592241	125592710	True	NM_080859,NM_005388	chr9,chr9	+,-	OR1K1,PDCL	-29898,-1306
chr4:16216777-16217745	chr4	+	16216974	16217681	True	NM_153365,NR_027696	chr4,chr4	-,+	TAPT1,FLJ39653	10541,10604
chr2:69972956-69973435	chr2	+	69972955	69973482	True	NM_001153,NM_014911	chr2,chr2	+,-	ANXA4,AAK1	-3891,-101978
chr6:41004106-41004861	chr6	+	41004143	41004859	True	NM_173561,NM_001010873,NM_001159726	chr6,chr6,chr6	-,+,+	UNC5CL,TSPO2,TSPO2	2129,5377,5597
chr10:105987893-105989130	chr10	+	105988120	105989029	True	NR_030340,NM_001191003,NM_025145	chr10,chr10,chr10	-,+,-	MIR609,GSTO1,WDR96	-9479,24922,3142
chr8:145579315-145579647	chr8	+	145579344	145579460	True	NM_024531,NM_012162,NR_015428,NM_024555	chr8,chr8,chr8,chr8	+,-,-,-	GPR172A,FBXL6,C8ORFK29,FBXL6	2764,2722,-839,2722
chr2:99861497-99861949	chr2	+	99861631	99861932	True	NR_028356,NM_175735	chr2,chr2	+,-	MRPL30,LYG2	-64140,9689
chr2:32581856-32582060	chr2	+	32581964	32582060	True	NM_021209,NM_016252	chr2,chr2	-,+	NLRC4,BIRC6	-91152,35
chr9:130524467-130525354	chr9	+	130524685	130525222	True	NM_001142532,NM_001142533,NM_001142531,NM_001142534,NR_036055,NM_005489	chr9,chr9,chr9,chr9,chr9,chr9	-,-,-,-,+,-	SH2D3C,SH2D3C,SH2D3C,SH2D3C,MIR2861,SH2D3C	12,-7102,34,-7124,22974,8456
chr20:48553242-48553774	chr20	+	48553439	48553666	True	NM_006038,NM_018683	chr20,chr20	-,+	SPATA2,RNF114	-21359,-576
chr17:36906283-36906534	chr17	+	36906370	36906582	True	NM_007144,NM_002795	chr17,chr17	-,+	PCGF2,PSMB3	-1812,2419
chr3:125496145-125496658	chr3	+	125496395	125496517	True	NR_024250,NR_031687	chr3,chr3	+,-	LOC100125556,MIR548I1	138926,12928
chr17:8067079-8067721	chr17	+	8067256	8067604	True	NR_037447,NM_014232	chr17,chr17	+,-	MIR3676,VAMP2	22888,-963
chr17:73521932-73522192	chr17	+	73522069	73522183	True	NM_001031803,NM_207346,NM_020753,NM_001015002,NM_004524	chr17,chr17,chr17,chr17,chr17	+,+,-,+,+	LLGL2,TSEN54,CASKIN2,LLGL2,LLGL2	-337,-9511,-10442,-337,-337
chr14:96128401-96128665	chr14	+	96128404	96128688	True	NM_001098725,NR_028288	chr14,chr14	-,+	TCL1A,TCL6	51895,-10948
chrX:101995926-101997356	chrX	+	101995925	101997061	True	NM_001142530,NM_001142529,NM_021992	chrX,chrX,chrX	+,+,-	BHLHB9,BHLHB9,TMSB15A	3845,3845,-224226
chr17:45811892-45812172	chr17	+	45812028	45812088	True	NM_145798,NM_013351	chr17,chr17	-,+	OSBPL7,TBX21	87109,-1469
chr2:208489533-208489792	chr2	+	208489574	208489680	True	NM_145280,NM_001127395,NM_001142300	chr2,chr2,chr2	-,-,+	METTL21A,METTL21A,CCNYL1	66,343,86583
chr1:228394452-228394706	chr1	+	228394574	228394680	True	NM_181465,NM_001098623,NM_052843	chr1,chr1,chr1	-,+,+	MRPL55,OBSCN,OBSCN	-97561,1180,1180
chr5:59972404-59972766	chr5	+	59972495	59972808	True	NR_028509,NM_001145208	chr5,chr5	+,-	PART1,DEPDC1B	-188787,23242
chr21:47874731-47875687	chr21	+	47874926	47875676	True	NM_206889,NM_001146114,NM_001146115,NM_001146116,NM_206890,NM_206891,NM_015151,NM_058180	chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21	+,+,+,+,+,+,+,-	DIP2A,DIP2A,DIP2A,DIP2A,DIP2A,DIP2A,DIP2A,C21orf58	3185,3185,3185,3185,3185,3185,3185,-131141
chr2:139537498-139537724	chr2	+	139537553	139537641	True	NM_007226,NR_033658	chr2,chr2	-,+	NXPH2,LOC647012	220,117252
chr4:56494948-56495708	chr4	+	56495073	56495440	True	NR_003935,NM_006681	chr4,chr4	+,-	LOC644145,NMU	190796,7081
chr6:31794222-31794992	chr6_qbl_hap6	+	3087967	3088538	False	NM_001040437,NR_002745,NM_005527,NR_002742,NM_005346,NM_001040438	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,SNORD52,HSPA1B,C6orf48	7813,8160,-11485,9970,624,7813
chr6:31794222-31794992	chr6_dbb_hap3	+	3079903	3080474	False	NM_001040437,NR_002745,NM_005527,NR_002742,NM_005346,NM_001040438	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,SNORD52,HSPA1B,C6orf48	7805,8152,-11481,9964,624,7805
chr6:31794222-31794992	chr6	+	31794316	31794887	True	NM_001040437,NR_002745,NM_005527,NR_002742,NM_005346,NM_001040438	chr6,chr6,chr6,chr6,chr6,chr6	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,SNORD52,HSPA1B,C6orf48	7805,8152,-11481,9965,624,7805
chr6:31794222-31794992	chr6_apd_hap1	+	3109080	3109651	False	NM_001040437,NR_002745,NM_005527,NR_002742,NM_005346,NM_001040438	chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,SNORD52,HSPA1B,C6orf48	7795,8142,-11484,9956,624,7795
chr6:31794222-31794992	chr6_cox_hap2	+	3303898	3304469	False	NM_001040437,NR_002745,NM_005527,NR_002742,NM_005346,NM_001040438	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,SNORD52,HSPA1B,C6orf48	7799,8146,-11483,9957,624,7799
chr5:37834287-37834711	chr5	+	37834293	37834525	True	NM_152403,NM_000514,NM_001190469,NM_001190468,NM_199231	chr5,chr5,chr5,chr5,chr5	+,-,-,-,-	EGFLAM,GDNF,GDNF,GDNF,GDNF	424007,5311,1458,1458,1122
chr6:14973364-14975168	chr6	+	14974425	14975182	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	271344,688158
chr1:244515270-244516653	chr1	+	244515442	244516575	True	NM_001012970,NM_001126	chr1,chr1	+,-	C1orf100,ADSS	11,98912
chr12:25147032-25148975	chr12	+	25147176	25149024	True	NM_001101339,NM_001204126	chr12,chr12	-,+	C12orf77,LRMP	1406,56156
chr1:177142174-177143489	chr1	+	177142327	177143509	True	NM_207108,NM_004319,NM_021165	chr1,chr1,chr1	-,-,+	ASTN1,ASTN1,FAM5B	-8303,-8303,-1745
chr8:98789671-98790799	chr8	+	98789919	98790334	True	NR_002581,NM_018407	chr8,chr8	-,+	SNORA72,LAPTM4B	264162,-2168
chr19:54694714-54694992	chr19	+	54694841	54694915	True	NM_001146056,NM_001146082,NM_001146083,NM_024075,NM_024298,NM_001013,NM_001077446	chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,+,-,+,+	MBOAT7,MBOAT7,MBOAT7,TSEN34,MBOAT7,RPS9,TSEN34	-1108,-1108,-1108,-773,-1108,9810,188
chr16:27075073-27075377	chr16	+	27075142	27075402	True	NM_145080,NM_001145545	chr16,chr16	-,+	NSMCE1,C16orf82	204761,2816
chr13:48557746-48559239	chr13	+	48558141	48559278	True	NM_003850,NM_018283	chr13,chr13	-,+	SUCLA2,NUDT15	16234,52424
chr3:184078067-184079165	chr3	+	184078179	184078867	True	NM_004366,NM_001171087,NM_001171088,NM_001171089,NM_006232	chr3,chr3,chr3,chr3,chr3	-,-,-,-,+	CLCN2,CLCN2,CLCN2,CLCN2,POLR2H	574,574,574,574,2326
chr1:2460047-2460429	chr1	+	2460201	2460315	True	NM_018216,NM_003820,NM_001010926	chr1,chr1,chr1	-,+,-	PANK4,TNFRSF14,HES5	-2166,27489,1419
chr5:148037189-148037799	chr5	+	148037188	148037820	True	NM_000024,NM_000870	chr5,chr5	+,-	ADRB2,HTR4	168335,-3449
chr14:20147315-20147622	chr14	+	20147321	20147399	True	NM_001197287,NM_172194	chr14,chr14	-,+	OR11H2,OR4Q3	35142,68187
chr1:180202006-180202394	chr1	+	180202083	180202380	True	NR_037642,NM_033343	chr1,chr1	-,+	LOC100527964,LHX4	41487,-2702
chrX:69356715-69357840	chrX	+	69356951	69357576	True	NM_001002254,NM_001551	chrX,chrX	-,+	AWAT2,IGBP1	-87163,-3685
chr15:90234805-90235931	chr15	+	90234975	90235759	True	NM_003847,NM_020212	chr15,chr15	-,+	PEX11A,WDR93	-1017,-1001
chr17:3798084-3799777	chr17	+	3798206	3799706	True	NM_172207,NM_172206,NM_032294,NM_031965	chr17,chr17,chr17,chr17	-,-,-,+	CAMKK1,CAMKK1,CAMKK1,GSG2	-1869,-4169,-1869,-171060
chr11:101000616-101001709	chr11	+	101000641	101001742	True	NM_032021,NM_001202474,NM_000926	chr11,chr11,chr11	+,-,-	TMEM133,PGR,PGR	-137882,-847,-97
chr19:9435189-9435453	chr19	+	9435331	9435487	True	NM_001172650,NM_001202425,NM_032497,NM_198535,NM_001202409,NM_001202408,NM_001202407,NM_001202406,NM_001202410,NM_001202411,NM_001202412	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,-,+,+,+,+,+,+,+	ZNF559-ZNF177,ZNF559-ZNF177,ZNF559,ZNF699,ZNF559,ZNF559,ZNF559,ZNF559,ZNF559,ZNF559,ZNF559	-480,-11,-934,-19536,-934,-934,-934,-934,-934,-934,-480
chrX:122866440-122866688	chrX	+	122866533	122866607	True	NM_001204401,NM_001081550	chrX,chrX	+,-	XIAP,THOC2	127054,347
chr18:9882678-9883244	chr18	+	9882705	9883191	True	NM_005134,NM_001098529,NM_032243	chr18,chr18,chr18	-,+,+	PPP4R1,TXNDC2,TXNDC2	-268105,2531,2531
chrX:153410859-153411078	chrX	+	153410980	153411126	True	NM_020061,NM_001110792	chrX,chrX	+,-	OPN1LW,MECP2	-1306,-47792
chrX:153410859-153411078	chrX	+	153449390	153449536	False	NM_001586,NM_000513,NM_001048181	chrX,chrX,chrX	-,+,+	TEX28,OPN1MW,OPN1MW2	73968,-1356,-1356
chrX:153410859-153411078	chrX	+	153486508	153486654	False	NM_001586,NM_000513,NM_001048181	chrX,chrX,chrX	-,+,+	TEX28,OPN1MW,OPN1MW2	36850,-1356,-1356
chr20:50418406-50418681	chr20	+	50418484	50418576	True	NM_020436,NM_014484	chr20,chr20	-,+	SALL4,MOCS3	522,-843172
chr13:22172777-22173073	chr13	+	22172873	22173117	True	NM_152726,NM_002010	chr13,chr13	-,+	EFHA1,FGF9	5288,72097
chr2:235406664-235407151	chr2	+	235406680	235407184	True	NM_006944,NM_005737	chr2,chr2	+,-	SPP2,ARL4C	-447385,-987
chr5:177423997-177425733	chr5	+	177424308	177425764	True	NM_006261,NM_001079527	chr5,chr5	-,+	PROP1,FAM153C	-1065,9924
chr9:15497616-15498127	chr9	+	15497646	15498136	True	NM_173550,NM_021144	chr9,chr9	+,-	C9orf93,PSIP1	54960,12209
chr1:27304130-27304737	chr1	+	27304143	27304738	True	NM_152365,NM_001013642	chr1,chr1	-,+	C1orf172,TRNP1	-17242,15456
chr17:74383208-74383987	chr17	+	74383250	74384026	True	NM_021972,NM_182965,NM_002766,NM_001142601,NM_001142602	chr17,chr17,chr17,chr17,chr17	+,+,-,+,+	SPHK1,SPHK1,PRPSAP1,SPHK1,SPHK1	-2611,-2611,-33020,-2611,-2012
chr19:7006323-7007440	chr19	+	7006409	7007117	True	NR_024372,NM_001136507	chr19,chr19	-,+	FLJ25758,MBD3L5	-1,23476
chr3:56500233-56500608	chr3	+	56500235	56500609	True	NM_015576,NM_001012506	chr3,chr3	-,+	ERC2,CCDC66	1834,90574
chr19:4725013-4725639	chr19	+	4725016	4725114	True	NR_027148,NM_139159	chr19,chr19	+,-	C19orf30,DPP9	44002,-1161
chr19:1289095-1289568	chr19	+	1289154	1289344	True	NR_027271,NM_001405	chr19,chr19	-,+	C19orf23,EFNA2	-18895,-3037
chr2:224902083-224903385	chr2	+	224902151	224903250	True	NM_022915,NM_001136530,NM_006216,NM_001136528	chr2,chr2,chr2,chr2	+,-,-,-	MRPL44,SERPINE2,SERPINE2,SERPINE2	-80081,157,836,836
chr15:51387135-51387602	chr15	+	51387230	51387614	True	NR_027642,NM_207381	chr15,chr15	+,-	LOC100132724,TNFAIP8L3	-150955,9909
chr19:53967347-53967864	chr19	+	53967646	53967892	True	NR_002938,NM_001004301	chr19,chr19	-,+	LOC284379,ZNF813	138909,3096
chr15:66858102-66858373	chr15	+	66858164	66858420	True	NM_207338,NR_003105	chr15,chr15	-,+	LCTL,ZWILCH	-329,-60784
chr20:4989125-4990595	chr20	+	4989129	4990291	True	NM_005116,NR_028370,NM_203327	chr20,chr20,chr20	-,+,-	SLC23A2,PCNA-AS1,SLC23A2	-6984,109940,704
chr1:158639341-158641281	chr1	+	158639360	158641317	True	NM_001004478,NM_003126	chr1,chr1	+,-	OR10Z1,SPTA1	-63189,15239
chr2:233563962-233564534	chr2	+	233563964	233564591	True	NM_015575,NM_001172416,NM_001103146,NM_001103147,NM_001103148	chr2,chr2,chr2,chr2,chr2	+,-,+,+,+	GIGYF2,KCNJ13,GIGYF2,GIGYF2,GIGYF2	-2000,76742,-2000,-2000,-2000
chr16:84399752-84400168	chr16	+	84399759	84400013	True	NM_014861,NM_172347	chr16,chr16	+,-	ATP2C2,KCNG4	2119,-126403
chr22:46482962-46483577	chr22	+	46483013	46483577	True	NR_037413,NM_018280,NR_027033	chr22,chr22,chr22	+,-,+	MIR3619,C22orf26,LOC400931	3346,-32989,-1187
chr1:1197632-1197984	chr1	+	1197668	1197956	True	NM_058167,NM_001130413	chr1,chr1	-,+	UBE2J2,SCNN1D	11328,12681
chr12:102565569-102566177	chr12	+	102565751	102566228	True	NM_017915,NM_002674	chr12,chr12	+,-	C12orf48,PMCH	-51854,25445
chr2:62134533-62134916	chr2	+	62134533	62134829	True	NM_006430,NM_152516	chr2,chr2	-,+	CCT4,COMMD1	-18742,-1788
chr16:2017791-2018340	chr16	+	2017790	2018354	True	NR_003142,NM_174903,NM_002952,NR_002327,NR_002326,NM_006453,NR_003020,NM_004548	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,-,-,-,+,+,+	SNHG9,RNF151,RPS2,SNORA10,SNORA64,TBL3,SNORA78,NDUFB10	-2844,-966,-2963,-5323,-4683,3709,-2656,-8324
chr19:10629507-10629864	chr19	+	10629560	10629858	True	NM_001166215,NM_030760,NM_032885	chr19,chr19,chr19	-,-,+	S1PR5,S1PR5,ATG4D	-892,-1434,24788
chr3:196671781-196672291	chr3	+	196671907	196671983	True	NM_007362,NR_024388,NM_001042540	chr3,chr3,chr3	-,+,-	NCBP2,LOC152217,NCBP2	-2443,-2464,-2443
chr20:11887722-11888572	chr20	+	11887737	11888507	True	NM_000214,NM_014962	chr20,chr20	-,+	JAG1,BTBD3	-1233043,10057
chr11:62608826-62609676	chr11	+	62608883	62609587	True	NM_003164,NM_018093,NM_001012662	chr11,chr11,chr11	-,-,+	STX5,WDR74,SLC3A2	-9323,-1255,13896
chr16:778730-778986	chr16	+	778788	778882	True	NM_001031737,NM_023933,NM_032304	chr16,chr16,chr16	-,+,+	CCDC78,FAM173A,HAGHL	-2315,-7681,-1573
chr2:11810292-11811104	chr2	+	11810498	11811146	True	NM_012344,NM_145693	chr2,chr2	-,+	NTSR2,LPIN1	-169,75593
chr4:17579488-17579994	chr4	+	17579516	17579972	True	NM_000320,NM_015907	chr4,chr4	-,+	QDPR,LAP3	-65659,-640
chr2:158066159-158067343	chr2	+	158066183	158067382	True	NM_014568,NM_020711	chr2,chr2	+,-	GALNT5,ERMN	46957,115084
chr11:117854671-117855309	chr11	+	117854795	117855321	True	NR_026691,NM_001077263,NM_001558	chr11,chr11,chr11	+,-,+	IL10RA,TMPRSS13,IL10RA	1784,-54680,1784
chr17:73894288-73894725	chr17	+	73894321	73894609	True	NM_173547,NM_001113324,NM_032478	chr17,chr17,chr17	-,+,-	TRIM65,C17orf106,MRPL38	-1267,80688,6622
chr3:143531088-143532192	chr3	+	143531338	143532172	True	NM_173653,NM_173552	chr3,chr3	-,+	SLC9A9,C3orf58	35251,158467
chr10:15087109-15088064	chr10	+	15087188	15087764	True	NM_001039844,NM_018324,NM_001039702	chr10,chr10,chr10	-,+,+	ACBD7,OLAH,OLAH	43061,-1353,-1353
chr2:74063504-74063752	chr2	+	74063584	74063780	True	NM_201647,NM_006463,NM_003584,NM_213622	chr2,chr2,chr2,chr2	+,+,-,+	STAMBP,STAMBP,DUSP11,STAMBP	-7549,-7508,-56300,-7488
chr1:154189512-154190260	chr1	+	154189821	154190005	True	NM_138740,NM_001098616,NM_015449,NM_014847,NM_001127320	chr1,chr1,chr1,chr1,chr1	-,-,-,+,+	C1orf43,C1orf43,C1orf43,UBAP2L,UBAP2L	3320,3320,3320,3319,2649
chr14:70884418-70885174	chr14	+	70884418	70884979	True	NM_001202548,NM_001202549,NM_001202547,NM_003813,NM_018373	chr14,chr14,chr14,chr14,chr14	-,-,-,+,-	SYNJ2BP-COX16,SYNJ2BP-COX16,SYNJ2BP-COX16,ADAM21,SYNJ2BP	-611,-611,-611,39237,-611
chr9:108451866-108453792	chr9	+	108452122	108453796	True	NM_018112,NM_005502	chr9,chr9	+,-	TMEM38B,ABCA1	3028,-761595
chr6:111138083-111138734	chr6	+	111138089	111138528	True	NM_001634,NM_015076	chr6,chr6	+,-	AMD1,CDK19	57458,-1677
chr7:134458775-134460182	chr7	+	134458941	134459936	True	NM_001628,NM_033138,NM_004342,NM_033157	chr7,chr7,chr7,chr7	-,+,+,+	AKR1B1,CALD1,CALD1,CALD1	-315053,4227,4227,4227
chr1:247750754-247752012	chr1	+	247751415	247751985	True	NM_001001915,NM_198074	chr1,chr1	+,-	OR2G2,OR2C3	37,-54274
chr16:86599545-86600282	chr16	+	86599597	86600110	True	NM_005251,NR_027490	chr16,chr16	+,-	FOXC2,MTHFSD	746,-10756
chr1:236678246-236679304	chr1	+	236678451	236679263	True	NM_201545,NM_201544,NM_201543,NR_034040,NM_006499	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	LGALS8,LGALS8,LGALS8,LOC100287902,LGALS8	2250,7763,7475,8595,7475
chr12:52300296-52300761	chr12	+	52300518	52300714	True	NM_001077401,NM_000020,NM_001013690	chr12,chr12,chr12	+,+,-	ACVRL1,ACVRL1,FIGNL2	5398,487,-74817
chr1:235327565-235328821	chr1	+	235327711	235328550	True	NM_001037277,NM_015014,NR_027762,NM_001161533	chr1,chr1,chr1,chr1	+,-,-,-	GGPS1,RBM34,RBM34,RBM34	163202,-3140,-3140,-3140
chrX:24165888-24167355	chrX	+	24166467	24167144	True	NM_030624,NM_003410,NM_001178095,NM_001178086,NM_001178085,NM_001178084	chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,+	KLHL15,ZFX,ZFX,ZFX,ZFX,ZFX	-121164,709,617,617,701,696
chr14:77966216-77966859	chr14	+	77966236	77966844	True	NM_182509,NM_012111,NM_199296	chr14,chr14,chr14	-,+,-	ISM2,AHSA1,ISM2	-1026,-41914,-1026
chr16:1544096-1544317	chr16	+	1544229	1544365	True	NM_001013658,NM_016111	chr16,chr16	-,+	PTX4,TELO2	-5761,-928
chr8:17393536-17393793	chr8	+	17393542	17393761	True	NM_001164771,NM_003046,NM_004686	chr8,chr8,chr8	+,+,-	SLC7A2,SLC7A2,MTMR7	2524,2524,-122502
chr9:40712019-40713326	chr9	+	40713287	40713367	True	NR_026801,NM_033160	chr9,chr9	+,-	FAM74A3,ZNF658	2156,78795
chr4:10023504-10024410	chr4	+	10023796	10024395	True	NM_000798,NM_020041	chr4,chr4	+,-	DRD5,SLC2A9	-240596,-682
chr14:58045732-58047203	chr14	+	58046162	58047242	True	NM_001080455,NM_001011713	chr14,chr14	-,+	SLC35F4,NAA30	16431,-188956
chr5:175791540-175791988	chr5	+	175791657	175791969	True	NM_173664,NM_001079685,NM_001079684,NM_020444	chr5,chr5,chr5,chr5	+,-,-,-	ARL10,KIAA1191,KIAA1191,KIAA1191	532,-2848,-2848,-2848
chr5:175791540-175791988	chr5	-	175790266	175790316	False	NM_173664,NM_001079685,NM_001079684,NM_020444	chr5,chr5,chr5,chr5	+,-,-,-	ARL10,KIAA1191,KIAA1191,KIAA1191	2185,-1457,-1457,-1457
chr9:139010691-139010933	chr9	+	139010771	139010899	True	NM_015597,NM_152833	chr9,chr9	+,-	GPSM1,C9orf69	211032,-40
chr20:307429-307850	chr20	+	307470	307532	True	NM_153269,NM_006943	chr20,chr20	-,+	C20orf96,SOX12	-36080,-1282
chr6:36860152-36860869	chr6	+	36860332	36860698	True	NM_152734,NM_016059	chr6,chr6	+,-	C6orf89,PPIL1	-6749,-17532
chr12:49412723-49414260	chr12	+	49412940	49414014	True	NM_002733,NM_212461,NM_005430	chr12,chr12,chr12	-,-,+	PRKAG1,PRKAG1,WNT1	-348,-348,-40755
chr13:45008524-45009291	chr13	+	45008524	45009255	True	NM_001010897,NM_006022	chr13,chr13	+,-	SERP2,TSC22D1	-60601,1785
chr16:10671552-10671840	chr16	+	10671575	10671888	True	NM_024997,NM_001424	chr16,chr16	+,-	ATF7IP2,EMP2	-148901,2701
chr5:7397019-7397754	chr5	+	7397040	7397791	True	NR_033906,NM_020546	chr5,chr5	-,+	LOC442132,ADCY2	-90213,-748
chr7:89744131-89744606	chr7	+	89744146	89744359	True	NR_003551,NM_152706	chr7,chr7	+,-	DPY19L2P4,C7orf62	4354,-1319115
chr7:55775032-55775970	chr7	+	55775062	55775874	True	NM_182633,NR_003949	chr7,chr7	+,-	ZNF713,FKBP9L	204456,-2802
chr7:55775032-55775970	chr7	-	33019905	33019961	False	NM_007270,NR_003500	chr7,chr7	+,-	FKBP9,RP9P	-22957,-37123
chrX:103498244-103498782	chrX	+	103498353	103498815	True	NM_153448,NM_207318	chrX,chrX	-,+	ESX1,FAM199X	834,-87103
chr14:24699198-24699663	chr14	+	24699278	24699355	True	NM_006156,NM_001002001,NM_001002000,NM_001199823,NM_016576,NM_001002002	chr14,chr14,chr14,chr14,chr14,chr14	-,+,+,-,+,+	NEDD8,GMPR2,GMPR2,NEDD8-MDP1,GMPR2,GMPR2	2278,2292,2292,2278,2747,2747
chr15:44581600-44583091	chr15	+	44581615	44582906	True	NM_032892,NM_177974,NM_138423	chr15,chr15,chr15	-,+,+	FRMD5,CASC4,CASC4	-94186,-757,-757
chr11:66612424-66612872	chr11	+	66612495	66612827	True	NM_001032279,NM_005133,NM_022172	chr11,chr11,chr11	+,+,-	RCE1,RCE1,PC	-1663,-1663,62563
chr6:32940794-32941438	chr6	+	32941153	32941227	True	NR_037625,NM_001113182,NM_005104,NM_006120,NM_001199455,NM_001199456	chr6,chr6,chr6,chr6,chr6,chr6	+,+,+,-,+,+	BRD2,BRD2,BRD2,HLA-DMA,BRD2,BRD2	-2539,-2539,-4767,-20254,-1832,-343
chr16:1992692-1992978	chr16	+	1992691	1992864	True	NM_016332,NM_004548	chr16,chr16	-,+	SEPX1,NDUFB10	480,16652
chr19:2253428-2253720	chr19	+	2253530	2253698	True	NR_036207,NM_000479,NM_144616	chr19,chr19,chr19	+,+,-	MIR4321,AMH,JSRP1	-2943,-4468,2774
chr2:44065925-44066196	chr2	+	44065940	44066022	True	NM_022436,NM_022437	chr2,chr2	-,+	ABCG5,ABCG8	2,80
chr19:58987995-58988719	chr19	+	58988000	58988570	True	NM_012254,NM_017908,NM_014347	chr19,chr19,chr19	-,+,+	SLC27A5,ZNF446,ZNF324	34912,-256,-9639
chr11:6675738-6676552	chr11	+	6675781	6676539	True	NM_001014795,NM_003737	chr11,chr11	+,-	ILK,DCHS1	-50625,585
chr5:74161122-74161674	chr5	+	74161137	74161571	True	NM_015566,NM_014886	chr5,chr5	-,+	FAM169A,NSA2	1094,-98085
chr16:285359-285631	chr16	+	285494	285678	True	NM_201412,NM_018032,NM_032039	chr16,chr16,chr16	-,-,+	LUC7L,LUC7L,ITFG3	-6045,-6045,-744
chr18:61258596-61259215	chr18	+	61258720	61259260	True	NM_012397,NM_002974	chr18,chr18	+,-	SERPINB13,SERPINB4	-4237,52294
chr9:32634041-32635090	chr9	+	32634117	32635091	True	NM_153809,NR_033992	chr9,chr9	-,+	TAF1L,LOC100129250	626,-82397
chr22:21274759-21276154	chr22	+	21274836	21275979	True	NM_058004,NM_005207	chr22,chr22	-,+	PI4KA,CRKL	-61766,-3173
chr6:112195798-112196895	chr6	+	112196059	112196867	True	NM_002037,NM_003880	chr6,chr6	-,+	FYN,WISP3	-1432,178410
chr9:107525436-107525984	chr9	+	107525616	107525867	True	NM_018376,NM_001001956	chr9,chr9	+,-	NIPSNAP3B,OR13C9	583,-145131
chr22:35843132-35843666	chr22	+	35843211	35843397	True	NM_005368,NM_006739	chr22,chr22	-,+	MB,MCM5	170037,-47146
chr11:117068925-117069266	chr11	+	117068939	117069251	True	NM_003186,NM_001001522,NM_004716	chr11,chr11,chr11	+,+,-	TAGLN,TAGLN,PCSK7	788,788,33610
chr4:159061227-159062849	chr4	+	159061235	159062615	True	NM_016613,NM_018342	chr4,chr4	-,+	FAM198B,TMEM144	31165,68785
chr1:9600411-9600657	chr1	+	9600415	9600567	True	NR_027045,NM_032315	chr1,chr1	-,+	C1orf200,SLC25A33	114127,-938
chr19:55852184-55852454	chr19	+	55852383	55852499	True	NM_144613,NM_032701	chr19,chr19	-,+	COX6B2,SUV420H2	13733,-1213
chr22:38479480-38479706	chr22	+	38479492	38479696	True	NM_013356,NM_012407	chr22,chr22	-,+	SLC16A8,PICK1	-322,-26281
chr3:119219691-119220228	chr3	+	119219831	119220131	True	NM_016589,NM_018266	chr3,chr3	+,-	C3orf1,TMEM39A	-2524,-37360
chr13:42856235-42857694	chr13	+	42856438	42857673	True	NM_016248,NM_001009814	chr13,chr13	+,-	AKAP11,KIAA0564	-10212,-321217
chr8:29938138-29938375	chr8	+	29938225	29938385	True	NM_016127,NM_015344	chr8,chr8	-,+	TMEM66,LEPROTL1	2318,14536
chr17:74065710-74066080	chr17	+	74065793	74065860	True	NM_180990,NM_014230,NM_003857	chr17,chr17,chr17	+,-,+	ZACN,SRP68,GALR2	9402,2804,5031
chr7:23035474-23035834	chr7	+	23035476	23035557	True	NM_001172428,NM_032581	chr7,chr7	+,-	KLHL7,FAM126A	109795,18278
chr8:67685288-67686219	chr8	+	67685347	67686241	True	NR_002734,NM_013257,NM_170709	chr8,chr8,chr8	-,+,+	PTTG3P,SGK3,SGK3	-5107,1174,1174
chr12:100749994-100750284	chr12	+	100750234	100750340	True	NM_001145288,NM_152317,NM_139319	chr12,chr12,chr12	+,-,+	SLC17A8,DEPDC4,SLC17A8	516,-89377,516
chr12:27090983-27091200	chr12	+	27091077	27091147	True	NM_001171887,NM_001171888,NM_015633,NM_018164	chr12,chr12,chr12,chr12	+,+,+,-	FGFR1OP2,FGFR1OP2,FGFR1OP2,C12orf11	157,157,157,157
chr5:140750993-140751193	chr5	+	140750997	140751242	True	NM_018924,NM_032086,NM_032097,NM_032054,NM_018918,NM_018919,NM_005642	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,-	PCDHGB3,PCDHGA6,PCDHGB3,PCDHGA5,PCDHGA5,PCDHGA6,TAF7	-1086,2408,-1086,-7150,-7150,2408,-50646
chr1:166134864-166135443	chr1	+	166134875	166135467	True	NM_001017961,NR_037431	chr1,chr1	-,+	FAM78B,MIR3658	541,-257768
chr6:119257401-119259320	chr6	+	119257816	119259203	True	NM_153255,NM_017696,NM_014034	chr6,chr6,chr6	-,-,+	MCM9,MCM9,ASF1A	-1489,-4913,-42627
chr1:207675153-207676183	chr1	+	207675325	207676156	True	NR_029832,NM_000651,NM_000573	chr1,chr1,chr1	-,+,+	MIR29C,CR1,CR1	299179,-5904,-5904
chr18:30995285-30996106	chr18	+	30995693	30996092	True	NM_030632,NM_001105528	chr18,chr18	+,-	ASXL3,C18orf34	162448,24010
chr5:176902177-176903251	chr5	+	176902323	176903163	True	NM_001174102,NM_080881,NM_004395	chr5,chr5,chr5	+,-,-	PRR7,DBN1,DBN1	-27049,-2452,-1629
chr7:100860810-100861141	chr7	+	100860831	100861120	True	NM_001084,NM_006349	chr7,chr7	-,+	PLOD3,ZNHIT1	-37,103
chr19:39523774-39524035	chr19	+	39523775	39523841	True	NM_178820,NM_001004318	chr19,chr19	-,+	FBXO27,PAPL	-577,51103
chr1:182641365-182643318	chr1	+	182641552	182643294	True	NM_001102450,NM_033345,NR_036490	chr1,chr1,chr1	-,-,+	RGS8,RGS8,LOC284648	-133,-133,-57329
chr3:155572398-155572944	chr3	+	155572547	155572915	True	NM_001190992,NM_004733,NM_003875	chr3,chr3,chr3	-,-,+	SLC33A1,SLC33A1,GMPS	-299,-299,15409
chr3:178268168-178268588	chr3	+	178268298	178268624	True	NM_022470,NM_005832	chr3,chr3	-,+	ZMAT3,KCNMB2	521088,7993
chr7:30824006-30824225	chr7	+	30824096	30824220	True	NM_032222,NM_001202481	chr7,chr7	+,-	FAM188B,CRHR2	-13114,-84377
chr12:96588798-96589142	chr12	+	96588963	96589181	True	NM_000895,NM_005230	chr12,chr12	-,+	LTA4H,ELK3	-159598,-807
chr11:73090243-73091308	chr11	+	73090247	73091047	True	NM_152222,NM_032871,NM_015159	chr11,chr11,chr11	+,+,-	RELT,RELT,FAM168A	-2893,-2585,218231
chr12:31768786-31769329	chr12	+	31768790	31769250	True	NM_001135864,NM_144973	chr12,chr12	+,-	METTL20,DENND5B	30843,-24838
chr12:31768786-31769329	chr17	-	29672961	29673119	False	NM_014210,NM_032932	chr17,chr17	-,+	EVI2A,RAB11FIP4	-24194,45522
chr5:140762400-140762633	chr5	+	140762404	140762604	True	NM_032086,NM_032087,NM_003736,NM_032098,NM_032088,NM_018919,NM_005642,NM_014004,NM_018920	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,-,+,+	PCDHGA6,PCDHGA7,PCDHGB4,PCDHGB4,PCDHGA8,PCDHGA6,TAF7,PCDHGA8,PCDHGA7	-8804,12,4847,4847,8878,-8804,-62053,8878,12
chr11:118841839-118842317	chr11	+	118842067	118842158	True	NR_003040,NM_181721	chr11,chr11	-,+	RPL23AP64,FOXR1	32206,258
chr4:69217564-69218451	chr4_ctg9_hap1	+	47607	48105	False	NM_014058,NM_133370,NM_001031732	chr4_ctg9_hap1,chr4_ctg9_hap1,chr4_ctg9_hap1	+,-,-	TMPRSS11E,YTHDC1,YTHDC1	94983,-1861,-1861
chr4:69217564-69218451	chr4	+	69217685	69218183	True	NM_014058,NM_133370,NM_001031732	chr4,chr4,chr4	+,-,-	TMPRSS11E,YTHDC1,YTHDC1	94983,-1861,-1861
chr4:57625193-57626500	chr4	+	57625284	57626453	True	NM_021114,NM_005612	chr4,chr4	-,+	SPINK2,REST	61490,147588
chr2:45878148-45878385	chr2	+	45878222	45878292	True	NM_018079,NM_005400	chr2,chr2	-,+	SRBD1,PRKCE	-39789,750
chr5:140622705-140624120	chr5	+	140622758	140624036	True	NM_018935,NR_001282,NR_001281,NM_031947	chr5,chr5,chr5,chr5	+,+,+,-	PCDHB15,PCDHB19P,PCDHB18,SLC25A2	1110,-3120,-8871,59629
chr5:135670652-135671514	chr5	+	135670829	135671285	True	NM_001167576,NM_001001419	chr5,chr5	-,+	TRPC7,SMAD5	29929,-202344
chr10:135194336-135194722	chr10	+	135194588	135194770	True	NM_207127,NR_037509,NM_004092,NM_152911,NM_207128	chr10,chr10,chr10,chr10,chr10	+,-,-,+,+	PAOX,MIR3944,ECHS1,PAOX,PAOX	-1898,-9421,-7680,-1898,-1898
chr11:35974857-35976529	chr11	+	35975018	35976415	True	NM_174902,NM_001101653	chr11,chr11	+,-	LDLRAD3,COMMD9	-9461,334648
chr7:1173244-1173564	chr7	+	1173434	1173506	True	NM_001134396,NM_001134395,NM_032350,NM_001098201	chr7,chr7,chr7,chr7	-,-,-,+	C7orf50,C7orf50,C7orf50,GPER	4449,4449,4449,-45771
chr6:32632990-32634274	chr6	+	32633230	32634206	True	NM_002122,NM_002123	chr6,chr6	+,-	HLA-DQA1,HLA-DQB1	-28098,314
chr5:133990002-133990820	chr5	+	133990257	133990741	True	NM_021982,NM_016103	chr5,chr5	+,-	SEC24A,SAR1B	-5842,-21724
chr4:156868166-156868831	chr4	+	156868324	156868883	True	NM_005651,NM_001334	chr4,chr4	+,-	TDO2,CTSO	-43541,6224
chr14:103803830-103804262	chr14	+	103804038	103804299	True	NM_183004,NR_002964,NR_033938,NM_001969	chr14,chr14,chr14,chr14	+,+,-,+	EIF5,SNORA28,LOC100131366,EIF5	-2867,-48,-148673,-3610
chr6:163835603-163835875	chr6	+	163835654	163835714	True	NM_206854,NM_206855,NM_006775,NR_037593,NM_206853	chr6,chr6,chr6,chr6,chr6	+,+,+,-,+	QKI,QKI,QKI,LOC100526820,QKI	-30,-30,-30,-672,-30
chr10:103823519-103824159	chr10	+	103823729	103824129	True	NM_024747,NM_024541	chr10,chr10	+,-	HPS6,C10orf76	994,-7797
chr5:82368506-82369387	chr5	+	82368618	82369390	True	NM_003401,NM_174909,NM_022406,NR_003139,NM_022550	chr5,chr5,chr5,chr5,chr5	+,-,+,-,+	XRCC4,TMEM167A,XRCC4,SCARNA18,XRCC4	3926,3932,3926,-8462,3926
chr19:55585744-55586011	chr19	+	55585780	55585848	True	NM_133180,NM_138412,NM_017729	chr19,chr19,chr19	+,-,+	EPS8L1,RDH13,EPS8L1	1372,-4866,5911
chr2:158297076-158298453	chr2	+	158297146	158298447	True	NM_014568,NM_004288	chr2,chr2	+,-	GALNT5,CYTIP	-182870,2208
chr17:78311138-78312216	chr17	+	78311157	78312129	True	NM_020914,NM_001164638,NR_029376	chr17,chr17,chr17	+,+,-	RNF213,FLJ35220,LOC100294362	-76541,76837,76889
chr19:17335564-17336481	chr19	+	17335728	17336394	True	NM_005234,NM_024578,NM_018467	chr19,chr19,chr19	-,+,+	NR2F6,OCEL1,USE1	19814,660,-9624
chr14:24805070-24806108	chr14	+	24805335	24806051	True	NM_139247,NM_181657,NM_001198592,NM_001198568,NM_006871	chr14,chr14,chr14,chr14,chr14	-,+,-,-,-	ADCY4,LTB4R,ADCY4,ADCY4,RIPK3	-1058,-23074,-1058,-1058,3241
chr9:140498623-140498871	chr9	+	140498678	140498898	True	NM_152285,NM_138462	chr9,chr9	+,-	ARRDC1,ZMYND19	1197,-13741
chr6:13573778-13574032	chr6	+	13573797	13574049	True	NM_018988,NM_012241,NM_031244,NM_001193267	chr6,chr6,chr6,chr6	-,+,+,+	GFOD1,SIRT5,SIRT5,SIRT5	-86010,825,742,742
chr12:128048227-128048947	chr12	+	128048330	128048904	True	NR_033970,NR_033987	chr12,chr12	-,+	LOC440117,FLJ37505	-689094,317257
chr16:77237785-77238661	chr16	+	77237820	77238668	True	NM_001129979,NM_199355	chr16,chr16	+,-	SYCE1L,ADAMTS18	-4531,230393
chr6:160145312-160146096	chr6	+	160145317	160146144	True	NM_004906,NM_000636,NM_152857,NM_152858	chr6,chr6,chr6,chr6	+,-,+,+	WTAP,SOD2,WTAP,WTAP	2007,-30964,2475,2007
chr11:73998451-74000401	chr11	+	73998602	74000421	True	NM_182904,NM_016147	chr11,chr11	-,+	P4HA3,PPME1	22332,-116296
chr17:44338080-44339172	chr17_ctg5_hap1	+	1425177	1425228	False	NR_002940,NM_016632	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LRRC37A4,ARL17A	56148,88707
chr17:44338080-44339172	chr17_ctg5_hap1	-	526725	526893	False	NM_001193465,NM_014834	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	KIAA1267,LRRC37A	36604,-68121
chr17:44338080-44339172	chr17	+	44338628	44339217	True	NM_001193465,NM_014834	chr17,chr17	-,+	KIAA1267,LRRC37A	-35888,33279
chrX:17883292-17885154	chrX	+	17883645	17884875	True	NM_006746,NM_001172739,NM_001172732,NR_033349,NR_033348,NM_021785,NM_001172743	chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,-,-,-,-,-,-	SCML1,RAI2,RAI2,RAI2,RAI2,RAI2,RAI2	-128104,-4188,-4188,-4698,-4698,-4188,-4188
chr11:74862578-74862915	chr11	+	74862663	74862915	True	NM_001005285,NM_001145212,NM_007256,NM_001145211	chr11,chr11,chr11,chr11	-,+,+,+	OR2AT4,SLCO2B1,SLCO2B1,SLCO2B1	-61905,-682,-682,7928
chr16:55844606-55846481	chr16	+	55844796	55846358	True	NR_003276,NM_001025194	chr16,chr16	+,-	CES1P1,CES1	-50336,20767
chr12:13003936-13004742	chr12	+	13003994	13004702	True	NM_018654,NR_003932	chr12,chr12	-,+	GPRC5D,RPL13AP20	98666,23708
chr10:13203787-13204196	chr10	+	13203805	13204079	True	NM_018518,NM_145314,NM_182751	chr10,chr10,chr10	+,-,+	MCM10,UCMA,MCM10	-302,72299,-302
chr4:37958287-37958656	chr4	+	37958607	37958687	True	NM_006607,NM_001085400	chr4,chr4	+,-	PTTG2,RELL1	3368,-270608
chr9:99692526-99693217	chr9	+	99692883	99693147	True	NM_001170741,NM_001045477,NM_001001662	chr9,chr9,chr9	+,+,-	FAM22G,FAM22G,ZNF782	-1648,-1648,-76494
chr9:99692526-99693217	chr9	-	97089275	97089325	False	NM_017561,NR_033937	chr9,chr9	-,+	FAM22F,LOC100132077	1651,5432
chr13:100624963-100626744	chr13	+	100625229	100626698	True	NM_033132,NM_007129	chr13,chr13	-,+	ZIC5,ZIC2	-1051,7327
chr4:8595165-8596002	chr4	+	8595174	8595992	True	NM_001014447,NM_003501,NM_001014448,NM_003652	chr4,chr4,chr4,chr4	+,-,+,+	CPZ,ACOX3,CPZ,CPZ	-838,-152722,-838,-838
chr16:57219735-57219968	chr16	+	57219888	57219956	True	NM_133368,NM_024946	chr16,chr16	+,-	RSPRY1,FAM192A	284,70
chr8:124784969-124786052	chr8	+	124785293	124786057	True	NM_004306,NM_144963	chr8,chr8	-,+	ANXA13,FAM91A1	-35646,-4462
chr17:60703290-60703943	chr17	+	60703291	60703996	True	NM_001100875,NM_006039	chr17,chr17	-,+	MARCH10,MRC2	180069,765
chr16:51186817-51187065	chr16	+	51186887	51187104	True	NM_002968,NM_001042412,NM_001127892	chr16,chr16,chr16	-,+,-	SALL1,CYLD,SALL1	-1704,-410909,-2379
chr6:15083872-15084430	chr6	+	15083878	15084233	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	162293,579111
chr16:10936277-10937441	chr16	+	10936365	10937287	True	NM_000246,NM_001079512	chr16,chr16	+,-	CIITA,FAM18A	33767,-23744
chr2:114514280-114514968	chr2	+	114514538	114514848	True	NM_013412,NM_025181	chr2,chr2	+,-	RABL2A,SLC35F5	-129772,-138
chr10:114207715-114208517	chr10	+	114208150	114208536	True	NM_022494,NM_145206	chr10,chr10	-,+	ZDHHC6,VTI1A	-1478,-1445
chr9:102590940-102591362	chr9	+	102591319	102591403	True	NM_173199,NM_015051,NM_173200,NM_006981	chr9,chr9,chr9,chr9	+,-,+,+	NR4A3,ERP44,NR4A3,NR4A3	-7233,269977,-2361,-7233
chr5:64920193-64920573	chr5	+	64920197	64920526	True	NM_024941,NM_001656,NM_033228,NM_001093756,NM_001093755,NR_003545,NM_033227	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,-,-,+,+,+,-	C5orf44,TRIM23,TRIM23,C5orf44,C5orf44,C5orf44,TRIM23	31,-10,-10,31,31,31,-10
chr5:142800287-142800923	chr5	+	142800336	142800972	True	NM_021182,NM_001018074	chr5,chr5	+,-	HMHB1,NR3C1	390753,14155
chr19:20748603-20749364	chr19	+	20748637	20749198	True	NM_001159293,NR_034060	chr19,chr19	-,+	ZNF737,ZNF85	-11,356860
chr14:75897374-75899107	chr14	+	75897396	75899046	True	NM_130469,NM_001135049,NM_001135048,NM_007176,NM_001135047	chr14,chr14,chr14,chr14,chr14	+,+,+,-,+	JDP2,JDP2,JDP2,C14orf1,JDP2	-2387,-122,-2527,228542,-2938
chr5:78332557-78334229	chr5	+	78332691	78334036	True	NM_013391,NM_001178005	chr5,chr5	-,+	DMGDH,BHMT2	31471,31510
chr2:9563053-9563253	chr2	+	9563075	9563157	True	NM_022334,NM_004763,NM_016207	chr2,chr2,chr2	-,-,+	ITGB1BP1,ITGB1BP1,CPSF3	536,536,710
chr14:94421025-94421730	chr14	+	94421025	94421747	True	NM_016150,NM_138344	chr14,chr14	-,+	ASB2,FAM181A	2070,-35820
chr16:20703828-20704869	chr16	+	20703869	20704919	True	NM_202000,NM_052956	chr16,chr16	+,-	ACSM3,ACSM1	70392,-1291
chr20:62681842-62682083	chr20	+	62681998	62682060	True	NM_198723,NM_018419	chr20,chr20	+,-	TCEA2,SOX18	6378,-1019
chr16:85211608-85212007	chr16	+	85211688	85212054	True	NR_033984,NM_198491	chr16,chr16	+,-	LOC400548,FAM92B	-40983,-65574
chr3:112709856-112710068	chr3	+	112709884	112710102	True	NM_138940,NM_138485,NM_014170	chr3,chr3,chr3	-,+,+	CD200R1,GTPBP8,GTPBP8	-15947,-135,-135
chr3:108837482-108838397	chr3	+	108837523	108838425	True	NM_014429,NR_033977	chr3,chr3	-,+	MORC1,FLJ22763	-530,17135
chr9:32782044-32782606	chr9	+	32782133	32782601	True	NM_212558,NM_153809	chr9,chr9	+,-	TMEM215,TAF1L	895,-146466
chr9:101018797-101019756	chr9	+	101019020	101019620	True	NM_018946,NM_018421	chr9,chr9	+,-	NANS,TBC1D2	-200112,-1017
chr6:71665954-71666421	chr6	+	71666040	71666340	True	NM_080742,NM_021940	chr6,chr6	-,+	B3GAT2,SMAP1	498,-288612
chr20:61197470-61198451	chr20	+	61197832	61198448	True	NR_033263,NR_029676	chr20,chr20	-,+	C20orf200,MIR133A2	-49064,-35765
chr1:26224160-26225311	chr1	+	26224234	26225258	True	NR_037481,NM_203401,NM_203399,NM_005563,NM_001099626,NM_001145454	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,+,-	MIR3917,STMN1,STMN1,STMN1,FAM54B,STMN1	7737,7436,8160,7785,-76966,7785
chr13:60582247-60582698	chr13	+	60582572	60582723	True	NM_030932,NM_001146071	chr13,chr13	-,+	DIAPH3,TDRD3	4675,387867
chr4:99851294-99853097	chr4	+	99851300	99852427	True	NM_001130678,NM_001130679,NM_015143,NM_001968	chr4,chr4,chr4,chr4	-,-,+,-	EIF4E,EIF4E,METAP1,EIF4E	-1057,3,64360,3
chr4:152021535-152022925	chr4	+	152021768	152022763	True	NR_000007,NM_001006,NM_001128924	chr4,chr4,chr4	+,+,-	SNORD73A,RPS3A,SH3D19	2215,-1065,73997
chr16:76425981-76427133	chr16	+	76426273	76427158	True	NM_138994,NM_005548	chr16,chr16	+,-	CNTNAP4,KARS	-82599,-744688
chr11:4407923-4408983	chr11	+	4407967	4408761	True	NM_003141,NM_001005172	chr11,chr11	-,+	TRIM21,OR52K2	6215,61763
chr10:7832410-7833185	chr10	+	7832490	7832967	True	NM_005174,NM_012311,NM_001001973	chr10,chr10,chr10	+,-,+	ATP5C1,KIN,ATP5C1	-2456,-2546,-2456
chr7:74588930-74589540	chr7	+	74588975	74589309	True	NM_001003795,NR_003187	chr7,chr7	+,-	GTF2IRD2B,NCF1C	-80679,-1159
chr7:74588930-74589540	chr7	-	72633120	72633454	False	NR_002164,NR_003186	chr7,chr7	-,+	GTF2IRD2P1,NCF1B	52254,1219
chr7:74588930-74589540	chr7	-	74186821	74187155	False	NM_173537,NM_000265	chr7,chr7	-,+	GTF2IRD2,NCF1	80736,1153
chr3:142166984-142167419	chr3	+	142166995	142167425	True	NM_019001,NM_001145319,NM_001042604	chr3,chr3,chr3	-,+,-	XRN1,PLS1,XRN1	-142,147803,-142
chr5:70679022-70680170	chr5	+	70679310	70680207	True	NR_003922,NR_033968	chr5,chr5	+,-	PMCHL2,LOC100049076	-7756,-124188
chr5:70679022-70680170	chr5	+	22151005	22151055	False	NR_003921,NM_004061	chr5,chr5	+,-	PMCHL1,CDH12	-8595,702726
chr2:54354789-54356135	chr2	+	54354978	54356081	True	NM_001003937,NM_138448	chr2,chr2	-,+	TSPYL6,ACYP2	127378,-12627
chr5:177025551-177026516	chr5	+	177025706	177026293	True	NR_024019,NM_017510,NM_007255	chr5,chr5,chr5	-,+,+	FAM193B,TMED9,B4GALT7	-44158,-6544,825
chr5:154233612-154234020	chr5	+	154233628	154233824	True	NM_004779,NM_032385	chr5,chr5	+,-	CNOT8,C5orf4	4373,-3415
chr20:33265054-33265321	chr20	+	33265053	33265223	True	NM_080476,NM_021202	chr20,chr20	-,+	PIGU,TP53INP2	-12,26924
chr10:5853522-5854734	chr10	+	5853527	5854699	True	NM_001115156,NM_001494,NM_178150	chr10,chr10,chr10	-,-,+	GDI2,GDI2,FBXO18	863,863,77514
chr19:12832215-12832523	chr19	+	12832278	12832544	True	NM_001136196,NM_001136195,NM_004317,NM_013433	chr19,chr19,chr19,chr19	-,-,+,-	TNPO2,TNPO2,ASNA1,TNPO2	968,2316,15761,611
chr1:1357045-1357870	chr1	+	1357099	1357895	True	NR_026871,NM_001146685,NM_001145210	chr1,chr1,chr1	-,+,-	LOC441869,TMEM88B,LOC441869	-449,3612,-449
chr12:13024750-13025443	chr12	+	13024915	13025489	True	NM_018654,NR_003932	chr12,chr12	-,+	GPRC5D,RPL13AP20	77879,2921
chr12:57329657-57330429	chr12	+	57329694	57330466	True	NM_148897,NM_007264	chr12,chr12	-,+	SDR9C7,GPR182	-1505,57888
chr16:8713931-8715285	chr16	+	8713939	8715263	True	NM_001146336,NM_024109	chr16,chr16	-,+	TMEM114,METTL22	-91713,263
chrX:15332095-15332543	chrX	+	15332198	15332589	True	NM_001201583,NM_080873,NM_001012428,NM_203281	chrX,chrX,chrX,chrX	-,-,-,+	ASB11,ASB11,ASB11,BMX	1210,1210,145,186310
chr6:106534320-106534724	chr6	+	106534387	106534740	True	NM_004849,NM_001198	chr6,chr6	-,+	ATG5,PRDM1	239005,-247
chr7:36405160-36405712	chr7	+	36405330	36405762	True	NM_015314,NM_018685,NM_001199708,NM_001199707,NM_001199706	chr7,chr7,chr7,chr7,chr7	-,+,-,-,-	KIAA0895,ANLN,KIAA0895,KIAA0895,KIAA0895	1140,23669,1168,1072,1132
chr3:155524974-155525342	chr3	+	155524980	155525334	True	NM_003875,NM_173657	chr3,chr3	+,-	GMPS,C3orf33	62990,-925
chr2:177132561-177132919	chr2	+	177132781	177132929	True	NR_033979,NM_006554,NR_027850	chr2,chr2,chr2	-,+,+	LOC401022,MTX2,MTX2	-79095,1193,1193
chr12:98992086-98992644	chr12	+	98992120	98992436	True	NM_005888,NR_003015,NM_002635,NM_213611,NM_201612	chr12,chr12,chr12,chr12,chr12	+,+,+,+,-	SLC25A3,SNORA53,SLC25A3,SLC25A3,IKBIP	-4779,976,-4779,-4779,46203
chrX:21959857-21961088	chrX	+	21960227	21960949	True	NM_004595,NM_014332	chrX,chrX	+,-	SMS,SMPX	-1563,-183997
chr9:130551014-130551418	chr9	+	130551119	130551437	True	NM_001261,NM_170600,NR_036055	chr9,chr9,chr9	+,-,+	CDK9,SH2D3C,MIR2861	-2865,-10071,-2973
chr7:102105807-102106198	chr7	+	102105819	102106203	True	NM_152892,NM_017621	chr7,chr7	+,-	LRWD1,ALKBH4	-480,-498
chr6:137366284-137367004	chr6	+	137366286	137366522	True	NM_014432,NM_001008783	chr6,chr6	-,+	IL20RA,SLC35D3	-6,-122943
chr2:69664744-69665898	chr2	+	69664751	69665847	True	NM_001002755,NM_001153,NM_001002757,NM_001002756,NM_015700	chr2,chr2,chr2,chr2,chr2	-,+,-,-,-	NFU1,ANXA4,NFU1,NFU1,NFU1	2,303279,2,2,2
chr12:57030300-57031007	chr12	+	57030334	57031020	True	NR_003046,NM_001686,NM_002898,NM_013449,NR_002737	chr12,chr12,chr12,chr12,chr12	-,-,+,-,-	SNORD59B,ATP5B,RBMS2,BAZ2A,SNORD59A	6568,8882,-114776,-171,7915
chr17:56155253-56155955	chr17	+	56155287	56155977	True	NR_034041,NM_080677	chr17,chr17	-,+	SRSF1,DYNLL2	-70580,4802
chr5:85589466-85591158	chr5	+	85589520	85591197	True	NR_003719,NR_036243	chr5,chr5	+,-	NBPF22P,MIR4280	-11318,819625
chr5:85589466-85591158	chr1	-	108767253	108767304	False	NM_001143987,NM_001143989	chr1,chr1	+,-	NBPF6,NBPF4	225599,19450
chr5:85589466-85591158	chr1	+	109012283	109012334	False	NM_001102592,NM_001143988	chr1,chr1	-,+	HENMT1,NBPF6	191461,-19431
chr3:150322279-150322543	chr3	+	150322278	150322556	True	NM_016275,NM_014445	chr3,chr3	+,-	SELT,SERP1	-1269,-57850
chr4:22594424-22595787	chr4	+	22595040	22595820	True	NM_001128432,NM_145290	chr4,chr4	+,-	GBA3,GPR125	98727,-77368
chr2:197791201-197791408	chr2	+	197791206	197791345	True	NM_001080539,NM_024989	chr2,chr2	+,-	CCDC150,PGAP1	-286903,160
chr7:97600163-97600901	chr7	+	97600311	97600928	True	NR_002822,NM_014916	chr7,chr7	-,+	MGC72080,LMTK2	760,135268
chr12:88976057-88977716	chr12	+	88976376	88977739	True	NM_003994,NM_000899,NM_181783	chr12,chr12,chr12	-,-,+	KITLG,KITLG,TMTC3	-2126,-2126,-440354
chr8:56961363-56963337	chr8	+	56961707	56963359	True	NM_001011667,NR_002437	chr8,chr8	+,-	CHCHD7,SNORD54	160955,23151
chr9:21030287-21031153	chr9	+	21030506	21031202	True	NR_030166,NM_001010915	chr9,chr9	+,-	MIR491,PTPLAD2	-314454,483
chr7:72990750-72991445	chr7	+	72990920	72991227	True	NM_001077621,NM_012453	chr7,chr7	+,-	VPS37D,TBL2	90946,1837
chr7:129588604-129588836	chr7	+	129588758	129588882	True	NM_182697,NM_001202498,NM_003344,NM_014997	chr7,chr7,chr7,chr7	-,-,-,+	UBE2H,UBE2H,UBE2H,KLHDC10	3968,3951,3968,121466
chr4:94750437-94750855	chr4	+	94750600	94750740	True	NM_005172,NM_014485	chr4,chr4	+,-	ATOH1,HPGDS	-573,513337
chr19:18112209-18112414	chr19	+	18112286	18112372	True	NM_001025604,NM_015683,NM_005535	chr19,chr19,chr19	+,+,-	ARRDC2,ARRDC2,IL12RB1	-393,6604,85375
chr11:120530892-120531314	chr11	+	120531036	120531312	True	NM_012101,NM_014619	chr11,chr11	-,+	TRIM29,GRIK4	-522173,-59
chr2:85636586-85637198	chr2	+	85636701	85637096	True	NM_001747,NM_198482	chr2,chr2	-,+	CAPG,SH2D6	630,24821
chr8:143997439-143997996	chr8	+	143997490	143997979	True	NM_000498,NM_002066	chr8,chr8	-,+	CYP11B2,GML	1330,-81324
chr15:43933997-43935657	chr15	+	43934210	43935706	True	NM_054020,NM_172097,NM_172095,NM_001015001,NM_020990	chr15,chr15,chr15,chr15,chr15	-,-,-,+,+	CATSPER2,CATSPER2,CATSPER2,CKMT1A,CKMT1B	5383,5383,5383,49377,-49013
chr15:43933997-43935657	chr15	+	44030684	44031142	False	NR_002318,NM_005313	chr15,chr15	-,+	CATSPER2P1,PDIA3	7404,7447
chr19:51273951-51274393	chr19	+	51273990	51274436	True	NR_003068,NM_001506	chr19,chr19	-,+	SNORD88B,GPR32	27996,-183
chr16:89624013-89624360	chr16	+	89624050	89624308	True	NM_033251,NR_002450,NM_000977,NM_013275	chr16,chr16,chr16,chr16	+,+,+,-	RPL13,SNORD68,RPL13,ANKRD11	2822,3529,2781,-67081
chr1:185145542-185147230	chr1	+	185145562	185147269	True	NM_017673,NM_001202423	chr1,chr1	+,-	SWT1,TRMT1L	-19322,-19332
chr20:56298450-56300356	chr20	+	56298778	56300182	True	NM_002591,NM_199171	chr20,chr20	+,-	PCK1,PMEPA1	-162692,-12237
chrX:20136110-20136331	chrX	+	20136194	20136354	True	NM_152780,NM_001173456,NM_001168465,NM_001168466,NM_001168467	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	MAP7D2,PDHA1,MAP7D2,MAP7D2,MAP7D2	-1080,-774234,-1080,-1080,-1438
chr6:139457930-139458694	chr6	+	139458114	139458703	True	NM_016217,NM_031922	chr6,chr6	+,-	HECA,REPS1	-1916,-148716
chr11:9404188-9405142	chr11	+	9404187	9404982	True	NM_006391,NM_001165030	chr11,chr11	+,-	IPO7,TMEM41B	1186,-67891
chr16:69383521-69383894	chr16	+	69383591	69383885	True	NM_016101,NM_144676	chr16,chr16	+,-	NIP7,TMED6	-10227,1877
chr10:6777684-6778350	chr10	+	6777690	6778362	True	NR_036503,NM_006257	chr10,chr10	+,-	LOC439949,PRKCQ	-155354,-155452
chr14:102772193-102772605	chr14	+	102772196	102772467	True	NM_014226,NM_018335	chr14,chr14	-,+	RAGE,ZNF839	-665,13628
chr10:2006775-2007069	chr10	+	2006821	2007083	True	NR_033387,NM_018702	chr10,chr10	+,-	NCRNA00168,ADARB2	-438047,-227103
chr8:107284470-107285216	chr8	+	107284520	107285203	True	NM_018002,NM_139166,NM_001198533	chr8,chr8,chr8	+,-,+	OXR1,ABRA,OXR1	-2165,497320,-2165
chr17:38444327-38444761	chr17	+	38444350	38444676	True	NM_001254,NM_152219	chr17,chr17	+,-	CDC6,GJD3	-255,76325
chr11:17411710-17412484	chr11	+	17411730	17412350	True	NM_001166290,NM_001202439,NM_000525	chr11,chr11,chr11	-,+,-	KCNJ11,DKFZp686O24166,KCNJ11	-852,-38472,-1524
chr14:106385571-106385826	chr14	+	106385621	106385801	True	NR_002224,NR_026800	chr14,chr14	-,+	ADAM6,KIAA0125	52607,-1834
chr9:139848324-139848626	chr9	+	139848328	139848654	True	NM_000606,NM_018998,NM_178536	chr9,chr9,chr9	+,-,+	C8G,FBXW5,LCN12	-8681,-9155,-1611
chr1:158725342-158725951	chr1	+	158725351	158725890	True	NM_001005185,NM_001005184	chr1,chr1	-,+	OR6N1,OR6K6	10639,-796
chr21:45286785-45287182	chr21	+	45286972	45287222	True	NR_026961,NM_020132	chr21,chr21	-,+	LOC284837,AGPAT3	-54524,-1907
chr17:38980217-38981780	chr17	+	38980467	38981681	True	NM_000421,NM_145274,NM_001195387,NM_001195386	chr17,chr17,chr17,chr17	-,+,+,+	KRT10,TMEM99,TMEM99,TMEM99	-1604,-5151,-5181,-5088
chr19:12818394-12819400	chr19	+	12818556	12819405	True	NR_002751,NM_004317	chr19,chr19	-,+	SNORD41,ASNA1	-1224,28900
chr10:129709149-129710688	chr10	+	129709414	129710468	True	NM_006504,NM_152311	chr10,chr10	+,-	PTPRE,CLRN3	-4140,-18203
chr17:8188786-8190156	chr17	+	8188804	8190010	True	NM_201520,NM_001177802,NM_016492,NM_001177801	chr17,chr17,chr17,chr17	-,+,+,+	SLC25A35,RANGRF,RANGRF,RANGRF	8213,1958,1958,1958
chr1:70877037-70878008	chr1	+	70877075	70877969	True	NM_001190463,NM_153742,NM_030816,NM_001902	chr1,chr1,chr1,chr1	+,+,-,+	CTH,CTH,ANKRD13C,CTH	-225,-225,-56658,-225
chrX:151305806-151306058	chrX	+	151305837	151306048	True	NM_001204811,NM_001011550,NM_021048,NM_001011543	chrX,chrX,chrX,chrX	-,+,-,-	MAGEA10-MAGEA5,MAGEA4,MAGEA10,MAGEA10	1027,-219128,1027,1027
chr11:65731244-65731991	chr11	+	65731278	65731955	True	NM_032325,NM_005146	chr11,chr11	-,+	EIF1AD,SART1	37674,-2169
chr5:180581309-180582739	chr5	+	180581697	180582535	True	NM_203297,NM_206880	chr5,chr5	-,+	TRIM7,OR2V2	45445,3
chr3:150925173-150926195	chr3	+	150925377	150926202	True	NM_053002,NM_013308	chr3,chr3	+,-	MED12L,GPR171	-120752,-4389
chr2:39346480-39347125	chr2	+	39346573	39347122	True	NM_005633,NM_001145451	chr2,chr2	-,+	SOS1,ARHGEF33	532,-200132
chr8:77484886-77485505	chr8	+	77484975	77485549	True	NM_024721,NR_024360	chr8,chr8	+,-	ZFHX4,LOC100192378	107965,110017
chr6:46135577-46137424	chr6	+	46135608	46137008	True	NM_014936,NM_021572	chr6,chr6	+,-	ENPP4,ENPP5	-37958,1759
chrX:128785189-128785803	chrX	+	128785318	128785804	True	NM_017413,NM_003399	chrX,chrX	-,+	APLN,XPNPEP2	3179,87141
chr11:108403578-108404021	chr11	+	108403582	108403940	True	NM_153705,NM_004398	chr11,chr11	-,+	KDELC2,DDX10	-34423,131875
chr16:67312315-67312764	chr16	+	67312369	67312591	True	NM_013241,NM_015432,NM_001129728,NM_001129729,NM_001129727,NM_001129731	chr16,chr16,chr16,chr16,chr16,chr16	-,+,+,+,+,+	FHOD1,PLEKHG4,PLEKHG4,PLEKHG4,PLEKHG4,PLEKHG4	-30944,-1007,458,897,-344,900
chr10:97665502-97666936	chr10	+	97665595	97666929	True	NM_001130446,NR_036113	chr10,chr10	+,-	C10orf131,MIR3157	792,157277
chr16:90016475-90017074	chr16	+	90016481	90017115	True	NM_207514,NM_017702,NM_145039	chr16,chr16,chr16	+,+,-	DEF8,DEF8,CENPBD1	-1349,-1381,22175
chr17:10324502-10325615	chr17	+	10324674	10325615	True	NM_020233,NM_002472	chr17,chr17	+,-	C17orf48,MYH8	275311,-15
chr1:150581260-150581779	chr1	+	150581453	150581543	True	NM_207045,NR_036211	chr1,chr1	-,+	ENSA,MIR4257	20122,-57106
chr6:14962285-14962561	chr6	+	14962306	14962561	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	283965,700779
chr3:192974199-192974769	chr3	+	192974476	192974763	True	NR_026877,NM_198505	chr3,chr3	+,-	MGC2889,ATP13A5	-14962,121802
chr3:127316409-127316942	chr3	+	127316435	127316639	True	NM_001142646,NM_004526,NM_001136053	chr3,chr3,chr3	-,+,-	TPRA1,MCM2,TPRA1	-6867,613,-6939
chr3:128210392-128210667	chr3	+	128210483	128210699	True	NM_001145662,NM_001145661,NR_026954,NM_032638	chr3,chr3,chr3,chr3	-,-,+,-	GATA2,GATA2,LOC90246,GATA2	-3719,-3110,15978,1381
chr19:46731328-46731939	chr19	+	46731497	46731887	True	NM_198541,NM_207393	chr19,chr19	+,-	IGFL1,IGFL3	1121,-103566
chr4:74125420-74126872	chr4	+	74125468	74126660	True	NM_032217,NM_000477,NM_198889	chr4,chr4,chr4	-,+,-	ANKRD17,ALB,ANKRD17	-966,143311,-966
chr6:116437727-116439473	chr6	+	116437946	116439490	True	NM_152729,NM_000493	chr6,chr6	+,-	NT5DC1,COL10A1	-16005,7858
chr7:119913460-119913758	chr7	+	119913581	119913797	True	NM_012281,NM_012338	chr7,chr7	+,-	KCND2,TSPAN12	0,584430
chr19:52150745-52151078	chr19	+	52150786	52151015	True	NR_029843,NM_001098612	chr19,chr19	+,-	MIR99B,SIGLEC14	44849,-654
chr16:84225375-84226304	chr16	+	84225433	84225705	True	NM_139174,NM_139353,NM_005679,NM_001145400	chr16,chr16,chr16,chr16	+,-,-,+	ADAD2,TAF1C,TAF1C,ADAD2	-761,-4771,-4771,-761
chr19:3786955-3787414	chr19	+	3786991	3787382	True	NM_139354,NM_139355,NM_172251	chr19,chr19,chr19	-,-,+	MATK,MATK,MRPL54	-576,-576,-24377
chr14:35514015-35515406	chr14	+	35514380	35515245	True	NM_001079519,NM_017917,NM_173607	chr14,chr14,chr14	+,-,+	FAM177A1,PPP2R3C,FAM177A1	-327,76324,364
chr8:141646691-141648050	chr8	+	141646829	141648007	True	NR_023360,NM_001164623,NM_012154	chr8,chr8,chr8	+,-,-	CHRAC1,EIF2C2,EIF2C2	-125465,-1183,-1183
chr6:43266305-43267185	chr6	+	43266448	43267182	True	NM_006672,NM_153320,NM_206922	chr6,chr6,chr6	+,+,-	SLC22A7,SLC22A7,CRIP3	-501,-501,9398
chr2:108902716-108904122	chr2	+	108902770	108904004	True	NM_001056,NM_176825,NR_024439	chr2,chr2,chr2	+,+,-	SULT1C2,SULT1C2,LOC729121	1090,1090,-460187
chr7:5567889-5568164	chr7	+	5567925	5568119	True	NM_001101,NM_003088	chr7,chr7	-,+	ACTB,FSCN1	2163,64334
chr3:58224313-58225761	chr3	+	58224402	58225518	True	NM_020676,NM_004944	chr3,chr3	+,-	ABHD6,DNASE1L3	-1194,-24004
chr6:29943165-29943406	chr6_qbl_hap6	+	1236014	1236090	False	NR_001317,NR_028032	chr6_qbl_hap6,chr6_qbl_hap6	-,+	HCG4P6,HCG9	-47939,-381
chr6:29943165-29943406	chr6_dbb_hap3	+	1236556	1236632	False	NR_001317,NR_028032	chr6_dbb_hap3,chr6_dbb_hap3	-,+	HCG4P6,HCG9	-48122,-381
chr6:29943165-29943406	chr6	+	29943222	29943298	True	NR_001317,NR_028032	chr6,chr6	-,+	HCG4P6,HCG9	-49794,-381
chr6:29943165-29943406	chr6_mcf_hap5	+	1325083	1325139	False	NR_026751,NR_028032	chr6_mcf_hap5,chr6_mcf_hap5	-,+	ZNRD1-AS1,HCG9	85773,-381
chr6:29943165-29943406	chr6_cox_hap2	+	1454925	1455001	False	NR_001317,NR_028032	chr6_cox_hap2,chr6_cox_hap2	-,+	HCG4P6,HCG9	-47774,-381
chr17:47075884-47076654	chr17	+	47076183	47076523	True	NM_004123,NM_006546,NM_001160423	chr17,chr17,chr17	-,+,+	GIP,IGF2BP1,IGF2BP1	-30228,-1460,-1460
chr19:8809869-8811190	chr19	+	8810078	8810829	True	NM_178525,NM_001004699	chr19,chr19	-,+	ACTL9,OR2Z1	-906,30561
chr19:36138571-36138970	chr19	+	36138660	36139019	True	NM_000704,NM_001863,NM_014209	chr19,chr19,chr19	-,+,+	ATP4A,COX6B1,ETV2	-84100,105,-6069
chr2:233733270-233733554	chr2	+	233733276	233733590	True	NM_001114090,NM_206895	chr2,chr2	-,+	NGEF,C2orf82	59323,1403
chr9:4739786-4740666	chr9	+	4739919	4740711	True	NM_001199855,NM_001199854,NM_005772,NM_001199853,NM_001199852,NM_016282	chr9,chr9,chr9,chr9,chr9,chr9	-,-,+,-,-,-	AK3,AK3,RCL1,AK3,AK3,AK3	1138,492,52122,1382,648,648
chr7:2394122-2394611	chr7	+	2394256	2394392	True	NM_013321,NM_001037283,NM_003751	chr7,chr7,chr7	-,+,+	SNX8,EIF3B,EIF3B	-40157,81,81
chr1:35736216-35737094	chr1	+	35736529	35736952	True	NM_005066,NM_005095	chr1,chr1	-,+	SFPQ,ZMYM4	-77786,-2026
chr14:95049096-95050533	chr14	+	95049245	95050582	True	NM_173850,NM_000624	chr14,chr14	-,+	SERPINA12,SERPINA5	-65064,-1565
chr19:58960846-58962567	chr19	+	58961971	58962506	True	NM_207395,NM_003433	chr19,chr19	+,-	ZNF324B,ZNF132	464,-10382
chr19:29392338-29392876	chr19	+	29392348	29392908	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	63129,311278
chr20:46133470-46133964	chr20	+	46133564	46133742	True	NM_006534,NM_001174088,NM_001174087,NM_181659,NM_183048	chr20,chr20,chr20,chr20,chr20	+,+,+,+,-	NCOA3,NCOA3,NCOA3,NCOA3,ZMYND8	-3027,-3027,-3027,-3027,-148090
chr16:74728929-74729568	chr16	+	74729057	74729617	True	NM_152649,NM_032268,NM_001142497	chr16,chr16,chr16	-,+,-	MLKL,ZNRF1,MLKL	5222,303297,5222
chr19:52900221-52900986	chr19	+	52900413	52900943	True	NM_001102657,NM_032423	chr19,chr19	-,+	ZNF836,ZNF528	-225517,177
chr9:46116394-46117006	chr9	+	46116565	46116861	True	NM_001145196,NR_024060	chr9,chr9	-,+	FAM75A6,FAM27A	-2485835,-389587
chr9:46116394-46117006	chr9	-	67786845	67786895	False	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	7344,139865
chr9:46116394-46117006	chr9	+	44997505	44997555	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-7320,-1366775
chr9:46116394-46117006	chr9	+	45732928	45732978	False	NM_001145196,NR_024060	chr9,chr9	-,+	FAM75A6,FAM27A	-2102198,-5950
chr9:46116394-46117006	chr9	-	46387454	46387750	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2756724,299815
chr12:12230400-12231215	chr12	+	12230557	12231047	True	NM_138722,NM_138723,NM_030766,NM_002336	chr12,chr12,chr12,chr12	+,+,+,-	BCL2L14,BCL2L14,BCL2L14,LRP6	-6218,-6742,-6218,188828
chr7:27218783-27219487	chr7	+	27218787	27219470	True	NM_005523,NM_018951,NR_037940,NR_037939,NR_029911,NM_153715,NR_002795	chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,-,+	HOXA11,HOXA10,HOXA10-HOXA9,HOXA10,MIR196B,HOXA10,HOXA11-AS1	5417,-4832,462,462,-9605,458,5556
chr16:28855791-28856093	chr16	+	28855904	28856116	True	NM_003321,NM_001145795	chr16,chr16	-,+	TUFM,SH2B1	1663,18961
chr1:178510120-178511097	chr1	+	178510166	178511064	True	NR_033186,NM_004673	chr1,chr1	+,-	C1orf220,ANGPTL1	866,329201
chr22:32148405-32149845	chr22	+	32148754	32149752	True	NM_001007188,NM_014662,NM_001136029,NM_173566	chr22,chr22,chr22,chr22	+,+,+,-	DEPDC5,DEPDC5,DEPDC5,PRR14L	316,316,1100,-2634
chr3:32860880-32861271	chr3	+	32860910	32861308	True	NM_016141,NM_001039111	chr3,chr3	-,+	DYNC1LI1,TRIM71	-248544,-1451
chr2:63275875-63276476	chr2	+	63275906	63276492	True	NR_027069,NM_014562,NM_001199770,NR_033389	chr2,chr2,chr2,chr2	-,+,+,-	LOC100132215,OTX1,OTX1,LOC100132215	-1060,1444,699,-250
chr16:65612132-65612743	chr16	+	65612165	65612775	True	NM_001795,NR_027755	chr16,chr16	+,-	CDH5,LOC283867	787749,-1962
chrX:150904465-150905382	chrX	+	150904699	150905413	True	NR_029973,NM_005140	chrX,chrX	-,+	MIR452,CNGA2	222821,-1532
chr11:65820101-65820518	chr11	+	65820115	65820488	True	NM_033036,NM_006842	chr11,chr11	-,+	GAL3ST3,SF3B2	-3464,-350
chr11:69489459-69489763	chr11	+	69489548	69489612	True	NM_053056,NM_153451	chr11,chr11	+,-	CCND1,ORAOV1	-33726,607
chr2:122408255-122409486	chr2	+	122408296	122409268	True	NM_015282,NR_037858,NM_001142274,NR_037857,NR_037856,NM_001142273	chr2,chr2,chr2,chr2,chr2,chr2	-,+,-,+,+,-	CLASP1,LOC254128,CLASP1,LOC254128,LOC254128,CLASP1	-1244,-1117,-1244,-1117,-782,-1244
chr8:64101091-64101362	chr8	+	64101170	64101241	True	NM_152758,NM_000370	chr8,chr8	+,-	YTHDF3,TTPA	-20103,-102558
chr2:74731411-74732717	chr2	+	74731488	74732765	True	NR_024606,NM_001009812,NM_032673,NM_016170	chr2,chr2,chr2,chr2	+,-,-,+	LOC151534,LBX2,PCGF1,TLX2	-1795,-1045,2106,8830
chr5:57753822-57755349	chr5	+	57753856	57755288	True	NM_006622,NM_152687	chr5,chr5	-,+	PLK2,GAPT	675,32041
chr8:145059934-145060797	chr8	+	145060069	145060637	True	NM_000837,NM_032789,NM_001009184,NM_000445	chr8,chr8,chr8,chr8	+,-,+,-	GRINA,PARP10,GRINA,PLEC	3588,48,3588,-9156
chr8:42911543-42911765	chr8	+	42911637	42911697	True	NR_027669,NR_033698,NM_002027	chr8,chr8,chr8	-,+,+	RNF170,FNTA,FNTA	-159771,-246,-246
chr4:187185714-187186365	chr4	+	187185896	187186360	True	NM_000128,NR_033900	chr4,chr4	+,-	F11,LOC285441	757,235902
chr7:100271329-100271624	chr7	+	100271513	100271577	True	NM_005273,NM_022574	chr7,chr7	+,-	GNB2,GIGYF1	-201,15343
chr3:111517510-111519061	chr3	+	111517644	111518857	True	NM_024508,NM_001134438	chr3,chr3	-,+	ZBED2,PHLDB2	-203478,59169
chr11:12314794-12315436	chr11	+	12314841	12315453	True	NM_013253,NM_032867	chr11,chr11	-,+	DKK3,MICALCL	-283924,-6446
chr19:18305892-18306363	chr19	+	18305942	18306090	True	NM_002866,NM_032683	chr19,chr19	-,+	RAB3A,MPV17L2	8834,-1953
chr8:23561433-23562474	chr8	+	23561553	23562297	True	NM_016612,NM_001136271	chr8,chr8	+,-	SLC25A37,NKX2-6	-175241,1675
chr10:111985425-111985640	chr10	+	111985430	111985642	True	NM_005962,NM_005871	chr10,chr10	+,-	MXI1,SMNDC1	119,79115
chr1:151318938-151319364	chr1	+	151318984	151319294	True	NM_000449,NM_002796,NM_001025603	chr1,chr1,chr1	-,+,-	RFX5,PSMB4,RFX5	525,52746,525
chr15:100203048-100204556	chr15	+	100203055	100204595	True	NM_001130928,NM_152449	chr15,chr15	+,-	MEF2A,LYSMD4	-29924,69081
chr14:70347033-70348762	chr14	+	70347145	70348731	True	NM_001034852,NM_003049,NM_022137	chr14,chr14,chr14	+,-,+	SMOC1,SLC10A1,SMOC1	-1083,-83139,-1083
chr11:61198938-61200633	chr11	+	61199457	61200125	True	NM_001136040,NM_001142565,NM_017841,NM_024811	chr11,chr11,chr11,chr11	-,-,+,-	CPSF7,CPSF7,SDHAF2,CPSF7	-1993,-1993,-1911,-2074
chr19:17957262-17958409	chr19	+	17957306	17958409	True	NR_001593,NM_000215	chr19,chr19	+,-	RPL18AP3,JAK3	12317,482
chr17:1547957-1548175	chr17	+	1547960	1548208	True	NM_001163673,NR_028075,NM_031430,NR_028076,NM_145352,NM_145350,NM_003693	chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,-,-,-,-	WDR81,SCARF1,RILP,SCARF1,SCARF1,SCARF1,SCARF1	71608,883,5234,883,883,883,883
chr22:17954364-17954628	chr22	+	17954375	17954682	True	NM_001039366,NM_031413	chr22,chr22	-,+	ATP6V1E1,CECR2	156963,1945
chr13:24885176-24886055	chr13	+	24885228	24886093	True	NM_178540,NM_006437	chr13,chr13	+,-	C1QTNF9,PARP4	-1571,200905
chr8:114269357-114269673	chr8	+	114269658	114269722	True	NR_031745,NM_198124	chr8,chr8	+,-	MIR2053,CSMD3	-613989,119710
chr19:45311823-45312156	chr19	+	45311926	45312126	True	NM_001013257,NM_005581,NR_027754	chr19,chr19,chr19	+,+,-	BCAM,BCAM,CEACAM22P	211,211,-251776
chr5:60458821-60459038	chr5	+	60458865	60459087	True	NM_001048249,NM_020928	chr5,chr5	-,+	C5orf43,ZSWIM6	-563,169012
chr17:17206869-17207076	chr17	+	17206981	17207109	True	NM_003653,NM_020201	chr17,chr17	-,+	COPS3,NT5M	-22364,-352
chr20:25725005-25726315	chr20	+	25725018	25726156	True	NR_004846,NM_015655	chr20,chr20	+,-	LOC100134868,ZNF337	264278,-47549
chrX:47049984-47050206	chrX	+	47049990	47050154	True	NM_003334,NM_153280,NR_024235	chrX,chrX,chrX	+,+,-	UBA1,UBA1,NDUFB11	3046,44,-45381
chr13:24460869-24461813	chr13	+	24460902	24461573	True	NM_001135816,NM_005932,NM_001014442,NM_001007537	chr13,chr13,chr13,chr13	+,-,+,-	PCOTH,MIPEP,PCOTH,C1QTNF9B	2018,2077,1454,9615
chr12:104015364-104016531	chr12	+	104015537	104016438	True	NM_017564,NM_001099336	chr12,chr12	+,-	STAB2,C12orf42	-34520,-125788
chr20:3801639-3802109	chr20	+	3801696	3801957	True	NM_001204447,NM_001204446,NM_001810,NM_018347	chr20,chr20,chr20,chr20	+,+,-,+	C20orf29,C20orf29,CENPB,C20orf29	-583,-583,-34359,-583
chr8:145579015-145579250	chr8	+	145579028	145579160	True	NM_024531,NM_012162,NR_015428,NM_024555	chr8,chr8,chr8,chr8	+,-,-,-	GPR172A,FBXL6,C8ORFK29,FBXL6	3064,3022,-523,3022
chr9:107329193-107330762	chr9	+	107329637	107330640	True	NM_001004483,NM_001004482,NM_001001961	chr9,chr9,chr9	+,-,-	OR13C8,OR13C5,OR13C3	808,31104,-30543
chr2:180351615-180352962	chr2	+	180351729	180352575	True	NM_001113398,NM_019091	chr2,chr2	-,+	ZNF385B,PLEKHA3	74790,-1006589
chr9:127177465-127177722	chr9	+	127177539	127177763	True	NM_002799,NM_001161808	chr9,chr9	-,+	PSMB7,GPR144	8,35659
chr6:57064773-57065056	chr6	+	57064853	57064983	True	NM_183227,NM_004282	chr6,chr6	-,+	RAB23,BAG2	21324,-27813
chr4:7191908-7193315	chr4	+	7191914	7193026	True	NM_020777,NR_027441	chr4,chr4	+,-	SORCS2,FLJ36777	1347,-86811
chr6:1391494-1392388	chr6	+	1391497	1392387	True	NM_001452,NR_027116	chr6,chr6	+,-	FOXF2,LOC285768	-1479,-289930
chr21:34538803-34539701	chr21	+	34538816	34539622	True	NR_024102,NM_000874	chr21,chr21	-,+	C21orf54,IFNAR2	2971,62608
chr14:55478164-55479834	chr14	+	55478570	55479534	True	NM_001008396,NM_080867	chr14,chr14	-,+	WDHD1,SOCS4	14335,14309
chr19:17959751-17960164	chr19	+	17959755	17960213	True	NR_001593,NM_000215	chr19,chr19	+,-	RPL18AP3,JAK3	10513,-914
chr9:85675751-85676966	chr9	+	85675829	85676968	True	NM_152573,NM_001001551	chr9,chr9	-,+	RASEF,C9orf103	1126,561064
chr1:53926532-53926820	chr1	+	53926610	53926836	True	NR_002314,NM_033067	chr1,chr1	-,+	FLJ40434,DMRTB1	-20917,-1589
chr10:101424297-101424727	chr10	+	101424523	101424731	True	NM_020354,NM_031212	chr10,chr10	+,-	ENTPD7,SLC25A28	-5322,-44302
chr18:61447833-61449553	chr18	+	61447946	61449445	True	NM_003784,NM_006919	chr18,chr18	+,-	SERPINB7,SERPINB3	-5394,-118749
chr17:5371296-5371499	chr17	+	5371313	5371529	True	NM_001199699,NM_020162,NM_024039	chr17,chr17,chr17	-,-,+	DHX33,DHX33,MIS12	901,901,18717
chr16:79779569-79780359	chr16	+	79779595	79780116	True	NM_005360,NM_130897	chr16,chr16	-,+	MAF,DYNLRB2	-144973,794737
chr4:129209218-129209452	chr4	+	129209217	129209447	True	NM_006320,NM_018078	chr4,chr4	-,+	PGRMC2,LARP1B	587,-226765
chr12:57039082-57039370	chr12	+	57039093	57039413	True	NR_002737,NM_003725,NM_001686,NM_013449,NR_003046	chr12,chr12,chr12,chr12,chr12	-,+,-,-,-	SNORD59A,HSD17B6,ATP5B,BAZ2A,SNORD59B	-208,117694,489,-8930,-1555
chr2:201644107-201644966	chr2	+	201644120	201644862	True	NM_014670,NR_037886	chr2,chr2	+,-	BZW1,LOC100507140	31784,-44220
chr2:74777407-74778354	chr2	+	74777556	74778398	True	NM_001197260,NM_001381,NM_032603	chr2,chr2,chr2	+,+,-	DOK1,DOK1,LOXL3	-1460,3113,2714
chr20:44164312-44164650	chr20	+	44164311	44164699	True	NM_080827,NM_006103	chr20,chr20	-,+	WFDC6,WFDC2	3491,-65975
chr12:121129817-121130148	chr12	+	121129996	121130152	True	NM_014730,NM_198202	chr12,chr12	+,-	MLEC,POP5	-5105,-110795
chr19:39322571-39323275	chr19	+	39322774	39323140	True	NM_001398,NM_001042507	chr19,chr19	-,+	ECH1,LGALS7B	-277,-42977
chr20:44326680-44328408	chr20	+	44326711	44328240	True	NM_172005,NM_172006,NM_172131	chr20,chr20,chr20	+,-,-	WFDC13,WFDC10B,WFDC10B	2414,5469,5469
chr11:63994264-63994543	chr11	+	63994351	63994553	True	NM_031472,NM_001160389,NM_001033678,NM_032344,NM_005528,NM_003377,NM_001160392,NM_001160393,NM_001160390,NM_001128613,NM_001128612	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,+,+,+,-,-,-,+,+	TRPT1,TRPT1,TRPT1,NUDT22,DNAJC4,VEGFB,TRPT1,TRPT1,TRPT1,NUDT22,NUDT22	-625,-625,-625,-664,3199,7712,-625,-1010,-625,-664,-664
chr3:56701399-56703385	chr3	+	56702052	56703256	True	NR_024460,NM_015224	chr3,chr3	+,-	CCDC66,C3orf63	-110927,-3978
chr3:12327722-12328028	chr3	+	12327721	12327944	True	NM_003256,NM_138712,NM_005037,NM_138711	chr3,chr3,chr3,chr3	-,+,+,+	TIMP4,PPARG,PPARG,PPARG	-126870,1404,1404,2491
chr10:48418340-48418997	chr10	+	48418579	48419030	True	NM_016204,NM_153034	chr10,chr10	-,+	GDF2,ZNF488	-1726,-63548
chr3:112049834-112050313	chr3	+	112049987	112050312	True	NM_005944,NM_183061,NM_001004196	chr3,chr3,chr3	+,-,+	CD200,SLC9A10,CD200	1603,-36913,1603
chr14:24425010-24425531	chr14	+	24425018	24425526	True	NR_023924,NR_023922,NR_023923,NM_021004,NR_023921	chr14,chr14,chr14,chr14,chr14	-,-,-,+,-	C14orf167,C14orf167,C14orf167,DHRS4,C14orf167	-1626,-720,-1626,-2114,-1626
chr6:134364852-134366622	chr6	+	134365355	134366651	True	NM_004865,NM_145176	chr6,chr6	+,-	TBPL1,SLC2A12	-91105,7193
chrX:110212246-110212602	chrX	+	110212417	110212522	True	NM_001128167,NM_001143983	chrX,chrX	+,-	PAK3,CHRDL1	-24962,-173131
chr6:87794507-87796104	chr6	+	87794617	87796060	True	NM_000735,NM_015021	chr6,chr6	-,+	CGA,ZNF292	8814,69208
chr17:17495386-17495876	chr17	+	17495565	17495845	True	NM_007169,NM_030665,NM_148172	chr17,chr17,chr17	-,+,-	PEMT,RAI1,PEMT	-9820,88941,-571
chr9:80793147-80793399	chr9	+	80793152	80793438	True	NM_001098802,NM_002072	chr9,chr9	+,-	CEP78,GNAQ	57552,-146933
chr11:15093781-15094258	chr11	+	15093791	15094297	True	NM_001741,NM_000728	chr11,chr11	-,+	CALCA,CALCB	-99959,848
chrX:135050107-135051656	chrX	+	135050325	135051226	True	NM_173470,NM_001177651	chrX,chrX	-,+	MMGT1,SLC9A6	4967,16356
chr16:22825253-22825463	chr16	+	22825439	22825505	True	NR_037517,NM_006043	chr16,chr16	-,+	MIR548AA2,HS3ST2	-22076,354
chr7:75111889-75113572	chr7	+	75112139	75112970	True	NM_001099415,NM_001099435	chr7,chr7	-,+	POM121C,SPDYE5	2648,11328
chr15:78631534-78632219	chr15	+	78631603	78632043	True	NM_004378,NM_025234	chr15,chr15	+,-	CRABP1,WDR61	622,-39663
chr17:27511796-27513269	chr17	+	27511848	27512968	True	NM_203318,NM_005208,NM_078471	chr17,chr17,chr17	-,+,-	MYO18A,CRYBA1,MYO18A	-4441,60906,-4441
chr1:21503833-21504310	chr1	+	21503852	21504298	True	NM_001198801,NM_001198803,NM_001198802,NM_032264	chr1,chr1,chr1,chr1	-,-,-,+	EIF4G3,EIF4G3,EIF4G3,NBPF3	-471,-2601,-471,262332
chr5:1800682-1801255	chr5	+	1800813	1801195	True	NM_032479,NM_004553	chr5,chr5	-,+	MRPL36,NDUFS6	-857,300
chr3:156009487-156009803	chr3	+	156009516	156009836	True	NM_007107,NM_172159	chr3,chr3	-,+	SSR3,KCNAB1	263187,-791
chr17:76250010-76250299	chr17	+	76250020	76250112	True	NR_002219,NM_001204210	chr17,chr17	-,+	EPR1,TMEM235	-29237,-22680
chr10:30724058-30724390	chr10	+	30724057	30724391	True	NR_003524,NM_005204	chr10,chr10	-,+	LOC729668,MAP3K8	-60680,-1242
chr10:115607930-115609914	chr10	+	115608471	115609961	True	NM_198514,NM_014881	chr10,chr10	+,-	NHLRC2,DCLRE1A	4429,3962
chr1:107688929-107690734	chr1	+	107689169	107690760	True	NM_001113226,NM_001113228,NM_001079874,NM_014917	chr1,chr1,chr1,chr1	+,+,-,+	NTNG1,NTNG1,VAV3,NTNG1	-6596,-6596,540417,-6480
chr15:75493817-75494020	chr15	+	75493838	75494022	True	NM_015492,NR_030360	chr15,chr15	+,-	C15orf39,MIR631	198,152054
chr17:80021689-80022091	chr17	+	80021746	80022112	True	NM_212492,NM_022156	chr17,chr17	+,-	GPS1,DUS1L	-12034,1618
chr19:8567195-8567729	chr19	+	8567269	8567554	True	NM_032152,NM_031203	chr19,chr19	-,+	PRAM1,HNRNPM	34,-57517
chr1:36789827-36790222	chr1	+	36789860	36790206	True	NM_024676,NM_018166	chr1,chr1	+,-	SH3D21,FAM176B	-17203,-105
chrX:40123648-40124195	chrX	+	40123683	40124032	True	NM_001123384,NM_005765	chrX,chrX	-,+	BCOR,ATP6AP2	-87101,316183
chr7:27221453-27222867	chr7	+	27221539	27222831	True	NM_005523,NM_018951,NR_037940,NR_037939,NM_153715,NR_002795	chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,+	HOXA11,HOXA10,HOXA10-HOXA9,HOXA10,HOXA10,HOXA11-AS1	2054,-7584,-1659,-1659,-1663,2195
chr1:247515755-247516616	chr1	+	247515976	247516558	True	NM_032752,NM_001079821	chr1,chr1	-,+	ZNF496,NLRP3	-20931,62899
chr8:48175462-48176067	chr8	+	48175471	48175963	True	NM_005195,NM_001080394	chr8,chr8	-,+	CEBPD,KIAA0146	474813,-1987
chr6:46137424-46138510	chr6	+	46137522	46138414	True	NM_014936,NM_021572	chr6,chr6	+,-	ENPP4,ENPP5	-39882,353
chr20:56725947-56726172	chr20	+	56726017	56726127	True	NM_178456,NR_003505	chr20,chr20	+,-	C20orf85,PPP4R1L	-85,158418
chr2:95539715-95539946	chr2	+	95539715	95539799	True	NR_003366,NM_144705	chr2,chr2	-,+	ANKRD20A8P,TEKT4	-16895,-2534
chr1:226496745-226496988	chr1	+	226496793	226496943	True	NM_173083,NM_031944	chr1,chr1	-,+	LIN9,MIXL1	305,-85461
chr1:121260264-121260682	chr1	+	121260298	121260642	True	NR_003955,NM_001017986	chr1,chr1	+,-	EMBP1,FCGR1B	267,-324354
chr19:12174419-12174999	chr19	+	12174987	12175047	True	NM_001136501,NM_001080404	chr19,chr19	+,-	ZNF844,ZNF878	498,-7860
chr16:46658168-46659907	chr3	+	128807968	128809364	False	NM_001204886,NM_000174	chr3,chr3	-,+	RAB43,GP9	31334,-28374
chr16:46658168-46659907	chr16	+	46658340	46659741	True	NM_014321,NM_024745	chr16,chr16	+,-	ORC6,SHCBP1	63816,-3029
chr12:90021307-90022033	chr12	+	90021307	90021701	True	NM_001001323,NR_028138	chr12,chr12	-,+	ATP2B1,LOC338758	28195,81030
chr3:122050529-122051544	chr3	+	122050544	122051536	True	NM_005213,NM_001017928	chr3,chr3	+,-	CSTA,CCDC58	-6586,50588
chr15:66798332-66798726	chr15	+	66798403	66798678	True	NM_006049,NM_000968,NR_003105,NR_002440,NR_002441,NR_002442,NR_002443,NM_017975	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,+,-,-,-,-,+	SNAPC5,RPL4,ZWILCH,SNORD16,SNORD18A,SNORD18B,SNORD18C,ZWILCH	-8257,-1219,-1023,-3155,-2751,-3974,-4747,-1023
chr7:87308702-87309828	chr7	+	87309153	87309814	True	NM_138290,NM_000927	chr7,chr7	+,-	RUNDC3B,ABCB1	-51488,32879
chr16:57503629-57504801	chr16	+	57503740	57504747	True	NM_018110,NM_032940	chr16,chr16	-,+	DOK4,POLR2C	15695,-7240
chr13:76112329-76112971	chr13	+	76112363	76112994	True	NM_203497,NM_203495,NM_006002	chr13,chr13,chr13	-,-,+	COMMD6,COMMD6,UCHL3	-372,-372,10932
chr2:228498183-228499326	chr2	+	228498912	228499360	True	NM_020161,NM_004504,NM_001162483	chr2,chr2,chr2	-,+,-	C2orf83,AGFG1,C2orf83	-876,-162076,-876
chr8:94711648-94712185	chr8	+	94711946	94712173	True	NM_145269,NR_033858	chr8,chr8	+,-	FAM92A1,LOC642924	599,538
chr20:42086494-42086711	chr20	+	42086603	42086747	True	NR_034009,NM_133170,NM_006275	chr20,chr20,chr20	+,-,+	SRSF6,PTPRT,SRSF6	-150,-268046,-150
chr1:19929746-19930925	chr1	+	19929873	19930724	True	NM_001204083,NM_001204082,NM_001032363,NM_001204089,NM_001204088,NR_033757,NR_033758,NM_004930	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,+,+,-	C1orf151,C1orf151,C1orf151,C1orf15-NBL1,C1orf15-NBL1,C1orf151,C1orf151,CAPZB	-6453,-6453,-6453,-6453,-6453,-6453,-6453,-117807
chr2:170376397-170377237	chr2	+	170376396	170376514	True	NM_006063,NM_024622	chr2,chr2	+,-	KBTBD10,FASTKD1	-10239,53966
chr4:186063603-186064062	chr4	+	186063632	186063962	True	NM_020827,NM_001151	chr4,chr4	-,+	KIAA1430,SLC25A4	61270,454
chr2:95830952-95831415	chr2	+	95831007	95831461	True	NM_021088,NM_001017396,NM_032788	chr2,chr2,chr2	+,+,-	ZNF2,ZNF2,ZNF514	-33,-33,-5744
chr17:19399156-19399785	chr17	+	19399156	19399588	True	NM_002404,NM_018242	chr17,chr17	-,+	MFAP4,SLC47A1	-108624,37578
chr17:20633061-20634058	chr17	+	20633292	20633896	True	NM_001190790,NM_001004306	chr17,chr17	+,-	CDRT15L2,CCDC144NL	-150306,165607
chr22:37958126-37958436	chr22	+	37958200	37958390	True	NM_152243,NM_006498	chr22,chr22	+,-	CDC42EP1,LGALS2	-1780,17684
chr5:137670790-137671913	chr5	+	137670794	137671683	True	NM_001135647,NM_001790,NM_022809,NM_016605	chr5,chr5,chr5,chr5	+,-,-,+	FAM53C,CDC25C,CDC25C,FAM53C	1540,-3278,-3278,2020
chr19:51455733-51455964	chr19	+	51455764	51455948	True	NM_001077492,NM_012427,NM_005551,NM_001077491	chr19,chr19,chr19,chr19	-,-,+,-	KLK5,KLK5,KLK2,KLK5	446,446,-79126,446
chr14:51340771-51341209	chr14	+	51340827	51341022	True	NM_181533,NM_181814,NM_182944	chr14,chr14,chr14	+,+,-	ABHD12B,ABHD12B,NIN	-2000,-2000,-42988
chr3:120459266-120461097	chr3	+	120459613	120460980	True	NM_173825,NM_005513	chr3,chr3	-,+	RABL3,GTF2E1	455,577
chr12:79942381-79943021	chr12	+	79942381	79942439	True	NR_031700,NM_002583	chr12,chr12	+,-	MIR1252,PAWR	-129395,142401
chr4:40521139-40521405	chr4	+	40521241	40521305	True	NM_019027,NM_017581	chr4,chr4	-,+	RBM47,CHRNA9	-3251,-183831
chr17:38574283-38574621	chr17	+	38574293	38574579	True	NM_001552,NM_001067	chr17,chr17	+,-	IGFBP4,TOP2A	25096,-91
chr2:172380155-172381741	chr2	+	172380268	172381787	True	NM_024843,NM_001127383,NM_024770	chr2,chr2,chr2	+,+,-	CYBRD1,CYBRD1,METTL8	-1453,-1453,-88956
chr3:68956104-68956580	chr3	+	68956222	68956623	True	NM_006407,NM_001005527	chr3,chr3	+,-	ARL6IP5,FAM19A4	177466,25145
chr10:96096195-96096748	chr10	+	96096415	96096554	True	NM_022451,NM_015188	chr10,chr10	-,+	NOC3L,TBC1D12	26182,65631
chrX:54519054-54520355	chrX	+	54519158	54520314	True	NM_004463,NM_001184819	chrX,chrX	-,+	FGD1,GNL3L	2335,36329
chr1:46902386-46903064	chr1	+	46902418	46902978	True	NM_001097611,NM_001441	chr1,chr1	-,+	KNCN,FAAH	113959,-42532
chr6:71377664-71377888	chr6	+	71377753	71377861	True	NM_080742,NM_001044305,NM_021940	chr6,chr6,chr6	-,+,+	B3GAT2,SMAP1,SMAP1	288977,-325,-325
chr3:69118684-69119954	chr3	+	69118996	69119631	True	NM_006407,NM_003968,NM_198195	chr3,chr3,chr3	+,-,-	ARL6IP5,UBA3,UBA3	14458,9957,9957
chr4:144258608-144258812	chr4	+	144258757	144258855	True	NM_001168235,NM_207123,NM_002039	chr4,chr4,chr4	-,+,+	FREM3,GAB1,GAB1	363023,-825,-825
chr3:14443692-14443924	chr3	+	14443727	14443971	True	NM_001134367,NM_001080423,NM_001134368,NM_003043	chr3,chr3,chr3,chr3	+,-,+,+	SLC6A6,GRIP2,SLC6A6,SLC6A6	134,139667,134,134
chr2:219132641-219133183	chr2	+	219132974	219133064	True	NM_015488,NM_001077191,NM_001087,NM_170699,NM_001077194,NM_001077399	chr2,chr2,chr2,chr2,chr2,chr2	+,+,-,+,+,+	PNKD,GPBAR1,AAMP,GPBAR1,GPBAR1,PNKD	2050,-7294,1889,-7294,-7294,2050
chr22:23414111-23415612	chr22	+	23414158	23415524	True	NM_002073,NM_014433	chr22,chr22	+,-	GNAZ,RTDR1	-1540,68767
chr7:7723465-7723991	chr7	+	7723535	7723699	True	NR_034084,NM_002947	chr7,chr7	+,-	LOC729852,RPA3	-43252,34597
chr14:93583229-93583960	chr14	+	93583534	93583724	True	NM_001142594,NR_002808,NM_014216,NM_001142593	chr14,chr14,chr14,chr14	-,+,-,-	ITPK1,ITPK1-AS1,ITPK1,ITPK1	-1271,-49789,-1271,-1271
chr10:90640513-90640852	chr10	+	90640535	90640799	True	NM_144590,NM_020799	chr10,chr10	-,+	ANKRD22,STAMBPL1	-28803,-560
chrX:40796444-40796796	chrX	+	40796516	40796838	True	NR_027761,NM_001039590	chrX,chrX	-,+	LOC100132831,USP9X	-104067,148049
chrX:153362177-153362452	chrX	+	153362322	153362418	True	NM_020061,NM_001110792,NM_004992	chrX,chrX,chrX	+,-,-	OPN1LW,MECP2,MECP2	47306,820,820
chr14:20903057-20903394	chr14	+	20903142	20903382	True	NM_001109997,NM_001641	chr14,chr14	-,+	KLHL33,APEX1	469,19907
chr14:64854801-64855252	chr14	+	64854815	64855205	True	NM_005956,NR_033777	chr14,chr14	+,-	MTHFD1,TEX21P	-107,-40486
chr11:240150-240922	chr11	+	240405	240801	True	NM_002817,NM_175932,NM_001017524,NM_012239	chr11,chr11,chr11,chr11	+,+,-,-	PSMD13,PSMD13,SIRT3,SIRT3	-3649,-3649,-4043,-4043
chr8:66555766-66556145	chr8	+	66555787	66556045	True	NM_018120,NM_014637,NM_001145839	chr8,chr8,chr8	-,+,+	ARMC1,MTFR1,MTFR1	-9335,842,842
chr20:33145655-33146157	chr20	+	33145758	33146106	True	NM_080476,NM_032514	chr20,chr20	-,+	PIGU,MAP1LC3A	119033,412
chrX:52840468-52840774	chrX	+	52840483	52840747	True	NM_130775,NM_001009616	chrX,chrX	+,-	XAGE5,SPANXN5	480,-14095
chr9:107525112-107525436	chr9	+	107525124	107525214	True	NM_018376,NM_001001956	chr9,chr9	+,-	NIPSNAP3B,OR13C9	1236,-144639
chrX:80518830-80520813	chrX	+	80518927	80520672	True	NM_003022,NM_030763	chrX,chrX	+,-	SH3BGRL,HMGN5	-61677,-61486
chr19:38396742-38397034	chr19	+	38396748	38396959	True	NM_031951,NM_015073	chr19,chr19	-,+	WDR87,SIPA1L3	411,908
chr2:178079445-178080115	chr2	+	178079544	178080152	True	NM_194247,NR_036075	chr2,chr2	+,-	HNRNPA3,MIR3128	-2181,40636
chr10:116165084-116166982	chr10	+	116165174	116166684	True	NM_198496,NM_032550,NM_001001936	chr10,chr10,chr10	+,-,-	VWA2,AFAP1L2,AFAP1L2	-166207,-659,-659
chr1:246950612-246951715	chr1	+	246951158	246951760	True	NR_015422,NM_015446	chr1,chr1	+,-	LOC149134,AHCTF1	1158,143016
chr5:96049583-96050636	chr5	+	96049688	96050606	True	NM_173060,NM_016442	chr5,chr5	+,-	CAST,ERAP1	-11247,93336
chr2:38976684-38977619	chr2	+	38976686	38977452	True	NM_001031684,NM_001195446,NM_024775	chr2,chr2,chr2	-,-,+	SRSF7,SRSF7,GEMIN6	1235,1235,27874
chr19:55999591-56000068	chr19	+	55999640	56000111	True	NM_024710,NM_001144950,NM_020378,NM_001195267	chr19,chr19,chr19,chr19	-,+,+,+	ISOC2,SSC5D,NAT14,SSC5D	-26591,-132,-3134,-132
chr20:325400-327335	chr20	+	325565	327158	True	NM_153269,NM_024958	chr20,chr20	-,+	C20orf96,NRSN2	-54175,211
chr8:11048797-11049758	chr8	+	11048797	11049520	True	NM_173683,NM_015458	chr8,chr8	-,+	XKR6,MTMR9	9418,92479
chr4:152117111-152118411	chr4	+	152117278	152118428	True	NM_183375,NM_001128924	chr4,chr4	+,-	PRSS48,SH3D19	79896,-20574
chr11:112120602-112122220	chr11	+	112120767	112121751	True	NM_000317,NM_001145024	chr11,chr11	+,-	PTS,C11orf34	-23730,9882
chr16:30409654-30410088	chr16	+	30409800	30410086	True	NM_001142305,NM_152652,NM_016643,NM_052838	chr16,chr16,chr16,chr16	+,+,+,-	ZNF771,ZNF48,ZNF771,SEPT1	8648,-2794,8648,-15629
chr11:125936197-125936410	chr11	+	125936240	125936417	True	NM_016952,NM_024556	chr11,chr11	-,+	CDON,FAM118B	-3053,145201
chr8:126439613-126439897	chr8	+	126439627	126439875	True	NM_014846,NM_025195	chr8,chr8	-,+	KIAA0196,TRIB1	-335566,2687
chr8:135807581-135807834	chr8	+	135807733	135807885	True	NR_029666,NR_029599,NR_002438	chr8,chr8,chr8	-,-,+	MIR30B,MIR30D,ZFAT-AS1	5017,9355,-197482
chr9:137031298-137031692	chr9	+	137031417	137031729	True	NR_023344,NM_052821	chr9,chr9	-,+	RNU6ATAC,WDR5	-1731,-26554
chr7:99775749-99777517	chr7	+	99775807	99777365	True	NM_024637,NM_152742,NM_012447	chr7,chr7,chr7	-,-,+	GAL3ST4,GPC2,STAG3	-9434,-817,-320
chr17:39528204-39528961	chr17	+	39528229	39528997	True	NM_030975,NM_021013,NM_002279	chr17,chr17,chr17	+,-,-	KRTAP9-9,KRT34,KRT33B	-116657,9689,-2182
chr12:102496809-102497894	chr12	+	102497616	102497682	True	NM_017915,NM_024057	chr12,chr12	+,-	C12orf48,NUP37	16273,14729
chr16:67875591-67875949	chr16	+	67875600	67875932	True	NM_025082,NM_020457,NM_005796	chr16,chr16,chr16	-,+,+	CENPT,THAP11,NUTF2	5479,280,4886
chr10:86097962-86099322	chr10	+	86098251	86099195	True	NM_018999,NM_015613	chr10,chr10	+,-	FAM190B,LRIT1	-9903,-97034
chr11:86381131-86382709	chr11	+	86381184	86382628	True	NM_001014811,NM_007173,NM_001161586,NM_006680	chr11,chr11,chr11,chr11	-,+,-,-	ME3,PRSS23,ME3,ME3	662,128862,1100,849
chr17:36901957-36903419	chr17	+	36902040	36903379	True	NM_007144,NM_002795	chr17,chr17	-,+	PCGF2,PSMB3	1229,5622
chr16:2526668-2527833	chr16	+	2526683	2527863	True	NM_001199107,NM_006181,NM_020705,NM_001048212	chr16,chr16,chr16,chr16	+,+,+,-	TBC1D24,NTN3,TBC1D24,CEMP1	-1589,-5236,-1589,53596
chr12:100377908-100378479	chr12	+	100377924	100378450	True	NM_152788,NR_031728	chr12,chr12	-,+	ANKS1B,MIR1827	32,205211
chr5:139944507-139945883	chr5	+	139944653	139945629	True	NM_133172,NM_001035235,NM_133174,NM_133173,NM_080670,NM_006051	chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,+,-	APBB3,SRA1,APBB3,APBB3,SLC35A4,APBB3	-464,-6975,-464,-464,-284,-464
chr6:53018070-53018317	chr6	+	53018267	53018370	True	NM_012347,NM_003643	chr6,chr6	+,-	FBXO9,GCM1	-82556,-4643
chr2:166490973-166491566	chr2	+	166490981	166491495	True	NM_004482,NM_024969	chr2,chr2	-,+	GALNT3,CSRNP3	159358,-62187
chr17:7588856-7589311	chr17	+	7589048	7589330	True	NM_001143992,NM_001143991,NM_001143990,NM_018081,NM_000546,NM_001126114,NM_001126112,NM_001126113	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,-,-,-,-	WRAP53,WRAP53,WRAP53,WRAP53,TP53,TP53,TP53,TP53	2336,1427,58,2336,1583,1583,1583,1583
chr1:153962835-153963242	chr1	+	153963008	153963272	True	NM_002870,NM_001030	chr1,chr1	-,+	RAB13,RPS27	-4202,24
chr16:30007926-30009466	chr16	+	30008127	30009181	True	NM_003609,NM_173618	chr16,chr16	-,+	HIRIP3,INO80E	-715,-647
chr11:1618207-1619379	chr11	+	1618327	1618907	True	NR_021489,NM_001004325	chr11,chr11	+,-	LOC338651,KRTAP5-2	-24407,667
chr4:166248974-166250877	chr4	+	166249202	166250652	True	NM_001017369,NR_026575,NM_006745	chr4,chr4,chr4	+,-,+	SC4MOL,GK3P,SC4MOL	-435,-48027,-435
chr3:42700225-42700445	chr3	+	42700239	42700425	True	NM_145166,NR_027753	chr3,chr3	+,-	ZBTB47,HHATL	-5114,42638
chr2:172557300-172557736	chr2	+	172557432	172557692	True	NM_003705,NM_001378	chr2,chr2	-,+	SLC25A12,DYNC1I2	193179,-13505
chr2:113523154-113524648	chr2	+	113523321	113524138	True	NM_152515,NM_005415	chr2,chr2	-,+	CKAP2L,SLC20A1	-1067,-119945
chr19:40696482-40696826	chr19	+	40696524	40696661	True	NM_152479,NM_002446	chr19,chr19	-,+	TTC9B,MAP3K10	27696,989
chr9:129377037-129377351	chr9	+	129377062	129377388	True	NM_001174146,NM_001174147,NM_002316,NM_012098	chr9,chr9,chr9,chr9	+,+,+,-	LMX1B,LMX1B,LMX1B,ANGPTL2	-391,-391,-391,507706
chr3:158289158-158289459	chr3	+	158289198	158289282	True	NM_001130157,NM_001130156,NM_020169,NM_001195433,NM_001195432,NM_022443,NM_001195434	chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,-,+,+,+,+	MLF1,MLF1,LXN,MLF1,MLF1,MLF1,MLF1	-296,-296,101250,-296,-296,-296,-296
chr7:143317380-143317587	chr7	+	143317478	143317548	True	NM_178561,NM_001130025,NM_173678	chr7,chr7,chr7	-,+,+	CTAGE6P,FAM115C,FAM115C	137345,496,993
chr7:143317380-143317587	chr7	-	143534297	143534367	False	NR_015421,NM_001004685	chr7,chr7	-,+	LOC154761,OR2F2	-487,97958
chr1:115300313-115300593	chr1	+	115300342	115300628	True	NM_007158,NM_003176,NM_001007553,NM_001130523	chr1,chr1,chr1,chr1	-,+,-,-	CSDE1,SYCP1,CSDE1,CSDE1	46,96826,46,93
chr12:31906862-31908136	chr12	+	31907190	31908075	True	NR_004854,NM_001135863	chr12,chr12	-,+	AMN1,METTL20	-25082,-94647
chr12:111357776-111358295	chr12	+	111358022	111358094	True	NM_000432,NR_036513	chr12,chr12	-,+	MYL2,LOC100131138	360,16311
chr12:25154989-25155617	chr12	+	25154990	25155570	True	NM_001101339,NM_001204126	chr12,chr12	-,+	C12orf77,LRMP	-4617,49610
chr2:98350155-98350667	chr2	+	98350230	98350698	True	NM_005735,NM_207519	chr2,chr2	-,+	ACTR1B,ZAP70	-69669,170
chr9:127904439-127905011	chr9	+	127904814	127905044	True	NM_001144877,NM_001174152,NM_173690	chr9,chr9,chr9	-,+,-	SCAI,RABEPK,SCAI	844,57776,844
chr8:42124241-42126082	chr8	+	42124916	42125539	True	NM_001190720,NM_001190721,NM_001190722,NR_033818,NR_033819,NM_033011,NR_033820,NM_001556	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	+,+,+,+,+,-,+,+	IKBKB,IKBKB,IKBKB,IKBKB,IKBKB,PLAT,IKBKB,IKBKB	3296,3335,3280,3280,3280,-59722,3280,3280
chr12:49314872-49316785	chr12	+	49315008	49316453	True	NM_001143782,NM_001143781,NM_033124,NM_016594	chr12,chr12,chr12,chr12	-,-,+,-	FKBP11,FKBP11,CCDC65,FKBP11	2940,2274,-17166,2940
chr14:77880815-77881835	chr14	+	77880856	77881645	True	NM_001010860,NM_001113475,NM_138791	chr14,chr14,chr14	+,-,-	SAMD15,C14orf148,C14orf148	-37146,7786,7639
chr7:7617112-7618038	chr7	+	7617326	7617933	True	NM_001037763,NM_019005	chr7,chr7	-,+	COL28A1,MIOS	-41866,-10761
chr17:73891044-73892095	chr17	+	73891137	73892137	True	NM_173547,NM_001113324,NM_032478	chr17,chr17,chr17	-,+,-	TRIM65,C17orf106,MRPL38	967,83160,9094
chr16:30206446-30207101	chr16	+	30206565	30206781	True	NM_177552,NR_037608,NR_037609,NM_001017390,NM_001014999,NM_001015000,NM_024044,NM_001031827,NR_002454,NM_001039182,NM_178044	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,+,+,-,+,-,+	SULT1A3,SLX1A-SULT1A3,SLX1B-SULT1A4,SULT1A4,SLX1A,SLX1A,SLX1B,BOLA2,LOC606724,BOLA2B,SLX1B	3767,-862,-862,3767,-1452,-1452,-1452,-938,-6611,-938,-1452
chr16:30206446-30207101	chr16	+	29467223	29467439	False	NM_177552,NR_037608,NR_037609,NM_001017390,NM_001014999,NM_001015000,NM_024044,NM_001031827,NR_002454,NM_001039182,NM_178044	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,+,+,-,+,-,+	SULT1A3,SLX1A-SULT1A3,SLX1B-SULT1A4,SULT1A4,SLX1A,SLX1A,SLX1B,BOLA2,LOC606724,BOLA2B,SLX1B	3767,-862,-862,3767,-1452,-1452,-1452,-938,-6608,-938,-1452
chr6:14730221-14730770	chr6	+	14730301	14730817	True	NM_001031713,NM_004973	chr6,chr6	-,+	CCDC90A,JARID2	-915512,515709
chr19:38399210-38399938	chr19	+	38399265	38399851	True	NM_031951,NM_015073	chr19,chr19	-,+	WDR87,SIPA1L3	-1948,-1455
chr18:10544378-10545231	chr18	+	10544458	10544930	True	NM_003826,NM_022068	chr18,chr18	+,-	NAPG,FAM38B	-18636,603883
chr3:48411158-48412101	chr3	+	48411192	48412135	True	NM_001159929,NM_207102,NM_001080525,NM_001159927	chr3,chr3,chr3,chr3	+,+,-,+	FBXW12,FBXW12,SPINK8,FBXW12	1573,1573,-41361,1573
chr20:61271962-61272651	chr20	+	61272172	61272604	True	NM_016354,NR_024470	chr20,chr20	+,-	SLCO4A1,LOC100127888	1192,25419
chr2:114346377-114347607	chr2	+	114346903	114347425	True	NR_024077,NR_024005	chr2,chr2	+,-	WASH2P,DDX11L2	-5724,11778
chr4:186580496-186580868	chr4	+	186580516	186580918	True	NM_001114357,NM_001145674,NM_001145675	chr4,chr4,chr4	+,-,-	C4orf47,SORBS2,SORBS2	-230028,-2393,-2393
chr19:7732595-7733202	chr19	+	7732973	7733093	True	NM_020415,NM_174918,NM_001193374,NM_002002	chr19,chr19,chr19,chr19	+,+,+,-	RETN,C19orf59,RETN,FCER2	878,8849,878,33989
chr19:38757198-38757667	chr19	+	38757325	38757665	True	NM_021102,NM_033256,NM_001166103	chr19,chr19,chr19	+,-,+	SPINT2,PPP1R14A,SPINT2	-2278,-10153,-2278
chr2:97200541-97200784	chr2	+	97200558	97200808	True	NM_212481,NR_026875	chr2,chr2	+,-	ARID5A,NEURL3	1655,-26712
chr12:125019239-125019797	chr12	+	125019282	125019796	True	NM_001077261,NM_181709	chr12,chr12	-,+	NCOR2,FAM101A	32264,-245623
chr4:17579994-17581779	chr4	+	17580000	17581600	True	NM_000320,NM_015907	chr4,chr4	-,+	QDPR,LAP3	-66143,-1124
chr7:134706336-134706590	chr7	+	134706463	134706563	True	NM_178563,NM_024033	chr7,chr7	+,-	AGBL3,C7orf49	-35255,149019
chr5:55146845-55148088	chr5	+	55147086	55147915	True	NM_139017,NM_173514	chr5,chr5	+,-	IL31RA,SLC38A9	-132,-138923
chr9:35651983-35653499	chr9	+	35652181	35652787	True	NM_014450,NM_001195201,NM_001195200,NR_003051,NM_001195217,NM_174923	chr9,chr9,chr9,chr9,chr9,chr9	-,+,+,-,+,+	SIT1,CCDC107,CCDC107,RMRP,CCDC107,CCDC107	-1234,5499,5499,5290,5499,5499
chr9:137806342-137807095	chr9	+	137806366	137807014	True	NM_015837,NM_002003	chr9,chr9	+,-	FCN2,FCN1	-33759,2842
chr15:71056200-71057240	chr15	+	71056251	71057267	True	NM_018003,NM_001199017	chr15,chr15	-,+	UACA,LRRC49	-401,127660
chr5:112196474-112196810	chr5	+	112196475	112196791	True	NM_001204199,NM_001204196,NM_001204194,NM_001204193,NM_005669,NM_003135	chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,-,+	SRP19,SRP19,SRP19,SRP19,REEP5,SRP19	93,93,93,93,61290,93
chr6:47672956-47674147	chr6	+	47673090	47674130	True	NM_153838,NM_001013732	chr6,chr6	+,-	GPR115,C6orf138	-6859,362353
chr11:18415161-18415878	chr11	+	18415460	18415772	True	NR_028500,NM_001165416,NM_001135239,NM_001165415,NM_005566,NM_181508,NM_001165414	chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,-,+	LDHA,LDHA,LDHA,LDHA,LDHA,HPS5,LDHA	163,163,163,163,163,-71739,2040
chr18:52256843-52258567	chr18	+	52256883	52258582	True	NM_173629,NM_001143829	chr18,chr18	+,-	C18orf26,CCDC68	-36,366747
chr3:53196009-53197260	chr3	+	53196071	53197275	True	NM_006254,NM_052859,NM_212539	chr3,chr3,chr3	+,-,+	PRKCD,RFT1,PRKCD	-899,-31601,-899
chr9:139847907-139848115	chr9	+	139848000	139848084	True	NM_000606,NM_018998,NM_178536	chr9,chr9,chr9	+,-,+	C8G,FBXW5,LCN12	-8353,-8827,-1283
chr10:125648771-125649972	chr10	+	125648794	125649971	True	NM_198148,NM_153442	chr10,chr10	-,+	CPXM2,GPR26	1579,-222974
chr15:89164937-89165449	chr15	+	89164954	89165312	True	NM_022767,NR_029606,NR_026645	chr15,chr15,chr15	+,+,-	AEN,MIR7-2,DET1	-478,-9949,-75042
chr12:54117905-54118960	chr12	+	54118241	54118812	True	NR_026554,NM_001143682,NM_020898,NM_017410	chr12,chr12,chr12,chr12	-,-,-,+	CALCOCO1,CALCOCO1,CALCOCO1,HOXC13	2545,2545,2545,213763
chr22:35529459-35530321	chr22	+	35529464	35530356	True	NM_001008494,NM_005368	chr22,chr22	+,-	ISX,MB	-67388,483078
chr6:75914174-75914641	chr6	+	75914240	75914666	True	NM_004370,NM_080645,NM_001100409	chr6,chr6,chr6	-,-,+	COL12A1,COL12A1,SENP6	1007,1007,396955
chr11:85566227-85566758	chr11	+	85566415	85566777	True	NM_032943,NM_173556	chr11,chr11	-,+	SYTL2,CCDC83	-44237,-322
chr1:175700091-175700653	chr1	+	175700118	175700685	True	NM_003285,NM_022093	chr1,chr1	-,+	TNR,TNN	12124,-663177
chr8:124195563-124196026	chr8	+	124195738	124195888	True	NM_032899,NR_024479,NM_207006	chr8,chr8,chr8	+,-,+	FAM83A,LOC100131726,FAM83A	-1037,19145,-1037
chr2:136874779-136875250	chr2	+	136875061	136875293	True	NM_001008540,NM_003467,NM_014607	chr2,chr2,chr2	-,-,+	CXCR4,CXCR4,UBXN4	-1248,482,-375923
chr2:28975492-28975849	chr2	+	28975519	28975859	True	NM_206876,NM_017910,NM_002709	chr2,chr2,chr2	+,-,+	PPP1CB,TRMT61B,PPP1CB	-968,117366,-956
chr5:178155136-178155652	chr5	+	178155183	178155354	True	NM_005649,NM_058230	chr5,chr5	-,+	ZNF354A,ZNF354B	2400,131599
chr1:161013621-161014947	chr1	+	161014027	161014831	True	NM_001113206,NM_001113207,NM_001113205,NR_033385,NM_207005,NM_007122	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,-	TSTD1,TSTD1,TSTD1,KLHDC9,USF1,USF1	-5253,-5253,-5253,53319,976,976
chr9:133526211-133526837	chr9	+	133526320	133526834	True	NR_027440,NM_021619	chr9,chr9	-,+	LOC100272217,PRDM12	-71439,13146
chr1:156305654-156306083	chr1	+	156305754	156306054	True	NR_036564,NR_036565,NM_005998,NM_001008800,NM_144627	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	CCT3,CCT3,CCT3,CCT3,C1orf182	2202,2202,2202,2202,1050
chr5:36242004-36242222	chr5	+	36242004	36242226	True	NM_001085411,NM_153013,NM_032637	chr5,chr5,chr5	-,-,+	C5orf33,C5orf33,SKP2	-104,82,-89866
chr3:127297811-127298708	chr3	+	127298018	127298582	True	NM_016372,NM_004526	chr3,chr3	-,+	TPRA1,MCM2	748,18670
chr11:61129850-61130244	chr11	+	61129890	61130260	True	NM_001161452,NM_001161454,NM_153611,NM_016464,NR_028473	chr11,chr11,chr11,chr11,chr11	-,-,-,+,+	CYBASC3,CYBASC3,CYBASC3,TMEM138,TMEM138	-5529,-135,-135,-468,-468
chr21:43341446-43342116	chr21	+	43341473	43342088	True	NM_199050,NR_027273	chr21,chr21	-,+	C2CD2,C21orf121	4768,100024
chr18:44236374-44237283	chr18	+	44236428	44237228	True	NM_144612,NM_031303	chr18,chr18	-,+	LOXHD1,KATNAL2	76,289558
chr13:40175209-40176801	chr13	+	40175309	40176614	True	NM_020751,NM_005780	chr13,chr13	+,-	COG6,LHFP	53149,792
chr12:32835225-32836901	chr12	+	32835360	32836055	True	NM_001040436,NM_012062,NM_005690,NM_012063	chr12,chr12,chr12,chr12	-,+,+,+	YARS2,DNM1L,DNM1L,DNM1L	72882,-3282,-3282,-3282
chr12:27076323-27076530	chr12	+	27076483	27076576	True	NM_001171888,NM_018164	chr12,chr12	+,-	FGFR1OP2,C12orf11	14728,14735
chr12:112452018-112452707	chr12	+	112452387	112452677	True	NM_001193453,NM_138341,NM_006817,NM_001193531,NM_001034025	chr12,chr12,chr12,chr12,chr12	-,-,+,-,+	TMEM116,TMEM116,ERP29,TMEM116,ERP29	-1364,-1364,-1286,-1364,-1286
chr4:106394808-106395012	chr4	+	106394861	106395057	True	NR_003586,NM_176869,NM_006903,NM_176867,NM_176866	chr4,chr4,chr4,chr4,chr4	+,-,-,-,-	EEF1A1P9,PPA2,PPA2,PPA2,PPA2	10805,220,220,220,220
chrX:153030828-153031049	chrX	+	153030881	153031077	True	NM_001163257,NM_004135,NM_005393	chrX,chrX,chrX	+,-,+	PLXNB3,IDH3G,PLXNB3	-1281,28940,-1281
chr12:70152291-70152673	chr12	+	70152290	70152720	True	NM_175625,NM_032735	chr12,chr12	+,-	RAB3IP,BEST3	-19165,-59094
chr12:70152291-70152673	chr2	+	60931030	60931103	False	NM_022893,NM_022894	chr2,chr2	-,+	BCL11A,PAPOLG	-150397,52261
chr2:170441930-170442421	chr2	+	170442062	170442453	True	NM_004792,NM_024622	chr2,chr2	+,-	PPIG,FASTKD1	-1263,-11638
chr12:54774701-54775973	chr12	+	54775149	54775758	True	NM_015481,NM_001130968,NR_029894,NM_001130967	chr12,chr12,chr12,chr12	-,-,+,-	ZNF385A,ZNF385A,MIR148B,ZNF385A	2780,9382,-44201,9382
chr1:169846018-169846418	chr1	+	169846124	169846333	True	NM_020423,NM_018186	chr1,chr1	-,+	SCYL3,C1orf112	16801,-81626
chr2:95960289-95960757	chr2	+	95960381	95960777	True	NM_013434,NM_032788	chr2,chr2	+,-	KCNIP3,ZNF514	2294,-135118
chr5:49963799-49964257	chr5	+	49964054	49964214	True	NM_024615,NM_198449,NM_001178055,NM_001178056	chr5,chr5,chr5,chr5	+,-,+,+	PARP8,EMB,PARP8,PARP8	-1334,-226820,-2373,-1334
chr3:11192179-11192441	chr3	+	11192219	11192423	True	NM_001098212,NR_027102	chr3,chr3	+,-	HRH1,LOC285370	3790,-386342
chr12:10766638-10767622	chr12	+	10766815	10767364	True	NM_007334,NM_018048	chr12,chr12	+,-	KLRD1,MAGOHB	-306458,-607
chr11:64007811-64008172	chr11	+	64007818	64008200	True	NM_138689,NM_004470,NM_057092,NM_001135208,NM_003377	chr11,chr11,chr11,chr11,chr11	-,+,+,+,+	PPP1R14B,FKBP2,FKBP2,FKBP2,VEGFB	6263,212,1387,403,-5603
chr19:51606764-51607367	chr19	+	51606867	51607335	True	NM_145232,NM_014441	chr19,chr19	-,+	CTU1,SIGLEC9	4362,20801
chr3:129802209-129802840	chr3	+	129802403	129802880	True	NM_001136152,NR_024252	chr3,chr3	+,-	ALG1L2,LOC729375	-1792,27446
chr17:18013420-18014434	chr17	+	18013533	18014381	True	NM_016239,NM_145691	chr17,chr17	+,-	MYO15A,ATPAF2	-1564,-71053
chr20:3028445-3028703	chr20	+	3028547	3028723	True	NM_001501,NM_178331,NM_000490,NM_178332,NM_030811	chr20,chr20,chr20,chr20,chr20	+,+,-,+,+	GNRH2,GNRH2,AVP,GNRH2,MRPS26	-4330,-4330,36697,-4330,-1923
chr4:118951754-118953528	chr4	+	118952218	118953387	True	NM_004784,NM_003619	chr4,chr4	+,-	NDST3,PRSS12	2112,320586
chr2:219535615-219536273	chr2	+	219535922	219536219	True	NM_022453,NM_015690	chr2,chr2	-,+	RNF25,STK36	625,542
chr7:87840217-87840487	chr7	+	87840216	87840420	True	NM_021723,NM_003130	chr7,chr7	+,-	ADAM22,SRI	-276707,9029
chr1:151021748-151022300	chr1	+	151021878	151022359	True	NM_001038707,NM_017860,NM_006818,NM_020239	chr1,chr1,chr1,chr1	-,+,+,-	CDC42SE1,C1orf56,MLLT11,CDC42SE1	9827,-1671,9791,9827
chr1:40726543-40727472	chr1	+	40726575	40727276	True	NM_005857,NM_001852	chr1,chr1	+,-	ZMPSTE24,COL9A2	-2901,55718
chr7:30720105-30720592	chr7	+	30720177	30720587	True	NM_001202483,NM_001202482,NM_001199219,NM_001883	chr7,chr7,chr7,chr7	-,-,+,-	CRHR2,CRHR2,INMT,CRHR2	1604,1604,71163,1604
chr1:234612155-234612853	chr1	+	234612220	234612638	True	NM_001012985,NM_005646	chr1,chr1	+,-	C1orf31,TARBP1	-102844,2261
chr19:34116622-34116983	chr19	+	34116780	34116936	True	NM_001166057,NM_001127895,NM_001127896	chr19,chr19,chr19	-,+,+	PEPD,CHST8,CHST8	-103981,-3972,-3960
chr7:42951025-42951251	chr7	+	42951092	42951220	True	NM_024054,NM_001099858,NM_031903	chr7,chr7,chr7	-,-,+	C7orf25,C7orf25,MRPL32	519,519,20718
chr12:68558319-68559251	chr12	+	68558321	68559047	True	NM_001010942,NM_000619	chr12,chr12	+,-	RAP1B,IFNG	445604,-4800
chr2:233241556-233242837	chr2	+	233241631	233242837	True	NR_028501,NM_001632	chr2,chr2	-,+	ECEL1P2,ALPP	8967,510
chr17:1663409-1663769	chr17	+	1663583	1663819	True	NM_002615,NR_028505	chr17,chr17	+,-	SERPINF1,C17orf91	1439,-44017
chr5:10250905-10251273	chr5	+	10250917	10251285	True	NM_199133,NM_012073	chr5,chr5	-,+	FAM173B,CCT5	-903,-686
chr12:49717457-49719045	chr12	+	49717490	49718311	True	NM_001100620,NM_001008223,NM_005480	chr12,chr12,chr12	+,-,+	TROAP,C1QL4,TROAP	-570,12711,-570
chr20:17952468-17953844	chr20	+	17952777	17953532	True	NR_003045,NM_152227,NM_014426,NM_052865	chr20,chr20,chr20,chr20	-,-,-,+	SNORD17,SNX5,SNX5,C20orf72	-9188,-3287,-3623,-3066
chr11:111473104-111473326	chr11	+	111473173	111473337	True	NM_015191,NM_017589	chr11,chr11	+,-	SIK2,BTG4	-54,-90109
chr17:62076452-62077506	chr17	+	62076628	62077344	True	NM_001164257,NM_001191029,NM_001191031,NM_001191030,NM_000873	chr17,chr17,chr17,chr17,chr17	+,+,+,+,-	C17orf72,C17orf72,C17orf72,C17orf72,ICAM2	-968,-968,-968,-968,6989
chr5:170770696-170771379	chr5	+	170770876	170771272	True	NM_021025,NR_037474	chr5,chr5	+,-	TLX3,MIR3912	-34645,42542
chr19:49401754-49402036	chr19	+	49401793	49402037	True	NM_003323,NM_006184	chr19,chr19	-,+	TULP2,NUCB1	9,1269
chr10:46320925-46321428	chr10	+	46321334	46321410	True	NM_133446,NM_015262	chr10,chr10	-,+	AGAP4,FAM21C	21561,-98737
chr16:58128603-58128832	chr16	+	58128700	58128774	True	NM_013242,NM_002428	chr16,chr16	-,+	C16orf80,MMP15	34572,-69472
chr9:113799294-113799912	chr9	+	113799368	113799892	True	NM_057159,NM_001401,NM_005592	chr9,chr9,chr9	-,-,+	LPAR1,LPAR1,MUSK	523,523,-368368
chr6:46250141-46250762	chr6	+	46250339	46250728	True	NM_005822,NM_014936	chr6,chr6	-,+	RCAN2,ENPP4	42862,-152696
chr1:113164167-113164424	chr1	+	113164203	113164383	True	NM_006135,NM_138728,NM_138729,NM_017744,NM_138727	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	CAPZA1,ST7L,ST7L,ST7L,ST7L	-2186,-2163,-2163,-2163,-2163
chr12:1056908-1057940	chr12	+	1057074	1057471	True	NM_134424,NM_178039	chr12,chr12	-,+	RAD52,ERC1	1442,42932
chr1:2342126-2342485	chr1	+	2342190	2342464	True	NM_002617,NM_007033,NM_153818	chr1,chr1,chr1	-,+,-	PEX10,RER1,PEX10	1596,-19027,1596
chr5:75700073-75701232	chr5	+	75700137	75701263	True	NM_006633,NM_004101	chr5,chr5	+,-	IQGAP2,F2RL2	-1039,218027
chr15:89439230-89440455	chr15	+	89439510	89440152	True	NM_178232,NM_013227	chr15,chr15	-,+	HAPLN3,ACAN	-740,-92887
chr3:15544678-15546289	chr3	+	15544871	15545755	True	NM_033083,NM_080538,NR_036232	chr3,chr3,chr3	+,-,-	EAF1,COLQ,MIR4270	-75858,-4492,-7056
chr3:155703240-155704882	chr3	+	155703334	155704584	True	NM_003875,NM_004733	chr3,chr3	+,-	GMPS,SLC33A1	-115066,-131086
chr11:415551-415827	chr11	+	415621	415871	True	NM_001135053,NM_007183,NM_021805,NM_001135054	chr11,chr11,chr11,chr11	-,+,-,-	SIGIRR,PKP3,SIGIRR,SIGIRR	1576,-21455,1576,-622
chr1:179335807-179336210	chr1	+	179335821	179336085	True	NM_001136001,NM_144696	chr1,chr1	-,+	ABL2,AXDND1	-137002,-1027
chr10:63659757-63660135	chr10	+	63659794	63660127	True	NM_032199,NM_145307	chr10,chr10	+,-	ARID5B,RTKN2	885,368391
chr2:71050159-71050739	chr2	+	71050303	71050689	True	NM_173535,NM_012476	chr2,chr2	-,+	CLEC4F,VAX2	-2571,77030
chr5:98015025-98016603	chr5	+	98015034	98016548	True	NM_001012761,NR_033932	chr5,chr5	+,-	RGMB,FLJ35946	88450,92291
chr1:26502423-26503058	chr1	+	26502422	26503107	True	NM_015871,NM_032588,NM_006314,NR_023345	chr1,chr1,chr1,chr1	+,-,+,+	ZNF593,TRIM63,CNKSR1,CNKSR1	-6085,-108301,873,874
chr7:152446489-152447477	chr7	+	152446506	152447384	True	NM_020445,NM_005431,NM_001040135	chr7,chr7,chr7	+,-,+	ACTR3B,XRCC2,ACTR3B	9466,-73256,9466
chr6:4892702-4893088	chr6	+	4892731	4893131	True	NM_001143971,NM_006638	chr6,chr6	+,-	CDYL,RPP40	-2556,111190
chr11:46611465-46612315	chr11	+	46611464	46612284	True	NM_017749,NM_001205120	chr11,chr11	-,+	AMBRA1,ATG13	688,26541
chr1:153429490-153430294	chr1	+	153429493	153430252	True	NM_002963,NM_176823	chr1,chr1	-,+	S100A7,S100A7A	2937,-40544
chr5:177578735-177579894	chr5	+	177578882	177579814	True	NM_022762,NM_017838,NM_001034833	chr5,chr5,chr5	+,-,-	RMND5B,NHP2,NHP2	-20912,1197,1197
chr3:9289815-9290097	chr3	+	9289842	9290132	True	NM_001114092,NM_014850,NM_001033117	chr3,chr3,chr3	+,-,-	THUMPD3,SRGAP3,SRGAP3	114584,1229,1229
chr3:35719311-35721097	chr3	+	35719499	35721107	True	NM_001025068,NM_001025069,NM_198399,NM_033403	chr3,chr3,chr3,chr3	+,+,+,-	ARPP21,ARPP21,ARPP21,DCLK3	8,8,1321,1060295
chr2:25476742-25477556	chr2	+	25477061	25477585	True	NM_153759,NM_014971	chr2,chr2	-,+	DNMT3A,EFR3B	-1881,-212139
chr2:107161210-107163002	chr2	+	107161253	107162660	True	NM_001144013,NR_003506	chr2,chr2	-,+	RGPD3,PLGLA	-76452,-158535
chr19:46798551-46799240	chr19	+	46798580	46799067	True	NM_152796,NM_152795,NM_022462,NM_152794,NM_032040	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	HIF3A,HIF3A,HIF3A,HIF3A,CCDC8	2565,1235,2565,7788,117902
chr11:128773796-128774870	chr11	+	128774034	128774905	True	NM_000890,NM_145013	chr11,chr11	+,-	KCNJ5,C11orf45	-12772,738
chr3:46784698-46785430	chr3	+	46784792	46785436	True	NM_001205271,NM_199183,NM_147196	chr3,chr3,chr3	-,-,+	PRSS46,PRSS45,TMIE	-6871,859,-42020
chr12:6935439-6935699	chr12	+	6935478	6935748	True	NM_014262,NM_031299,NM_019858,NM_014449	chr12,chr12,chr12,chr12	+,-,+,+	LEPREL2,CDCA3,GPR162,GPR162	1823,24758,-4566,-4566
chrX:27761326-27761605	chrX	+	27761399	27761479	True	NM_001136533,NM_001017930	chrX,chrX	+,-	DCAF8L2,DCAF8L1	3446,238137
chr16:1493700-1494050	chr16	+	1493840	1494040	True	NM_001143980,NM_016111	chr16,chr16	-,+	CCDC154,TELO2	500,49311
chr1:31458353-31458841	chr1	+	31458519	31458811	True	NR_002762,NR_003066	chr1,chr1	+,-	PRO0611,SNORD85	2100,-17435
chr2:91963815-91965586	chr2	+	91964208	91965460	True	NR_003503,NR_027238	chr2,chr2	+,-	GGT8P,LOC654342	-893,-116233
chr17:39729245-39730262	chr17	+	39729340	39730273	True	NM_000226,NM_005801	chr17,chr17	-,+	KRT9,EIF1	-1030,114853
chr10:118502689-118502945	chr10	+	118502712	118502956	True	NM_025015,NM_005396	chr10,chr10	-,+	HSPA12A,PNLIPRP2	-627,-122306
chr7:98799489-98799969	chr7	+	98799689	98800001	True	NM_001145715,NR_002147	chr7,chr7	-,+	KPNA7,MYH16	5138,70922
chr10:123923905-123924244	chr10	+	123923931	123924200	True	NM_006997,NM_017615,NM_206860	chr10,chr10,chr10	+,-,+	TACC2,NSMCE4A,TACC2	-877,-189188,-877
chr17:78075948-78076205	chr17	+	78076128	78076206	True	NM_001079804,NM_001079803,NM_014740,NM_000152	chr17,chr17,chr17,chr17	+,+,-,+	GAA,GAA,EIF4A3,GAA	-824,-824,44826,-824
chr3:58199853-58201510	chr3	+	58199858	58201268	True	NM_020676,NM_004944	chr3,chr3	+,-	ABHD6,DNASE1L3	21990,100
chr8:23261280-23261489	chr8	+	23261443	23261519	True	NM_001136108,NM_002318	chr8,chr8	+,-	R3HCC1,LOXL2	-115882,253
chr9:139637825-139638296	chr9	+	139637890	139638220	True	NM_198946,NR_033913,NM_001001712	chr9,chr9,chr9	-,+,-	LCN6,LOC100128593,LCN10	4810,2392,-479
chrX:1519099-1519589	chrY	+	1469123	1469370	False	NM_001636,NR_026710,NR_026711	chrY,chrY,chrY	-,+,+	SLC25A6,ASMTL-AS1,ASMTL-AS1	-8084,53,53
chrX:1519099-1519589	chrX	+	1519123	1519370	True	NM_001636,NR_026710,NR_026711	chrX,chrX,chrX	-,+,+	SLC25A6,ASMTL-AS1,ASMTL-AS1	-8084,53,53
chr15:60866713-60867126	chr15	+	60866712	60867097	True	NM_134262,NM_012182	chr15,chr15	-,+	RORA,FOXB1	17663,-570343
chr20:4988346-4988714	chr20	+	4988345	4988414	True	NM_005116,NR_028370,NM_203327	chr20,chr20,chr20	-,+,-	SLC23A2,PCNA-AS1,SLC23A2	-6200,111817,2584
chr15:51230093-51231389	chr15	+	51230183	51231360	True	NR_027642,NM_207381	chr15,chr15	+,-	LOC100132724,TNFAIP8L3	4965,166169
chr9:110072278-110074261	chr9	+	110072337	110074029	True	NM_004235,NM_002874	chr9,chr9	-,+	KLF4,RAD23B	178069,-26854
chr1:43313818-43315383	chr1	+	43313879	43315408	True	NM_015911,NM_199342	chr1,chr1	+,-	ZNF691,CCDC23	-1650,-30820
chr3:184430426-184431457	chr3	+	184430551	184431484	True	NM_001009921,NM_022149	chr3,chr3	+,-	VPS8,MAGEF1	98446,-715
chr2:234296841-234297686	chr2	+	234296840	234297306	True	NM_003648,NM_018218	chr2,chr2	+,-	DGKD,USP40	-93,176980
chr20:48533078-48533656	chr20	+	48533096	48533491	True	NM_006038,NM_001135773,NM_018683	chr20,chr20,chr20	-,-,+	SPATA2,SPATA2,RNF114	-1016,-2820,19422
chr3:184031906-184032298	chr3	+	184032072	184032192	True	NM_004953,NM_001194947,NM_198242,NM_198241,NM_001194946,NM_198244,NM_001171087,NM_182917	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,+,+,-,+	EIF4G1,EIF4G1,EIF4G1,EIF4G1,EIF4G1,EIF4G1,CLCN2,EIF4G1	5908,90,90,90,90,90,47257,759
chrX:30579560-30580481	chrX	+	30579617	30580488	True	NM_000167,NM_025159	chrX,chrX	+,-	GK,CXorf21	90987,15595
chr12:47606092-47607926	chr12	+	47606116	47607942	True	NM_138371,NR_026544	chr12,chr12	+,-	FAM113B,LOC100233209	2109,2340
chr5:180255360-180256050	chr5	+	180255378	180255990	True	NR_027183,NM_001114617	chr5,chr5	+,-	LOC729678,MGAT1	968,-18241
chr12:96183880-96184089	chr12	+	96183884	96183954	True	NM_003095,NM_021229	chr12,chr12	+,-	SNRPF,NTN4	68754,632
chr1:46863900-46864296	chr1	+	46863980	46864214	True	NM_001441,NM_006369	chr1,chr1	+,-	FAAH,LRRC41	-4092,-94942
chr11:35086235-35086672	chr11	+	35086285	35086714	True	NM_015957,NM_001202557	chr11,chr11	-,+	APIP,CD44	-148346,73702
chr17:16560367-16562270	chr17	+	16560516	16562189	True	NM_020787,NM_014695	chr17,chr17	-,+	ZNF624,CCDC144A	-3349,31449
chr19:1357756-1359019	chr19	+	1357760	1358710	True	NR_024247,NM_000156,NM_032853	chr19,chr19,chr19	+,-,+	MUM1,GAMT,MUM1	-1488,42892,-2835
chrX:134190470-134191445	chrX	+	134190529	134191070	True	NM_001078171,NM_001078172,NM_001134321	chrX,chrX,chrX	+,-,-	FAM127A,FAM127B,FAM127B	-24256,-4308,-4308
chr3:75441661-75443106	chr3	+	75441721	75443092	True	NR_031714,NR_024241	chr3,chr3	+,-	MIR1324,FAM86DP	236821,41225
chr5:148787858-148788198	chr5	+	148787880	148788234	True	NR_027180,NM_014443	chr5,chr5	+,-	LOC728264,IL17B	-1491,-29042
chr1:186798105-186799292	chr1	+	186798114	186799269	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-148555,-133
chr1:24286364-24286573	chr1	+	24286453	24286529	True	NM_001191006,NM_017761	chr1,chr1	-,+	SRSF10,PNRC2	20474,-203
chr13:77601381-77601623	chr13	+	77601516	77601604	True	NM_006493,NM_012158	chr13,chr13	+,-	CLN5,FBXL3	-35508,-185
chr19:7066544-7067378	chr19	+	7066544	7067320	True	NM_001044388,NM_024341,NM_001164425,NM_001044387	chr19,chr19,chr19,chr19	+,+,-,+	ZNF557,ZNF557,MBD3L3,ZNF557	2150,2150,-7899,2150
chr16:686347-686743	chr16	+	686404	686712	True	NM_001040165,NM_138418,NM_001040161,NM_001040162,NM_053284,NM_001040160,NM_032366	chr16,chr16,chr16,chr16,chr16,chr16,chr16	-,+,-,-,+,-,-	C16orf13,FAM195A,C16orf13,C16orf13,WFIKKN1,C16orf13,C16orf13	-57,5136,-57,-57,-5443,-57,-57
chr9:96792826-96793098	chr9	+	96792830	96793078	True	NM_177995,NM_021570	chr9,chr9	+,-	PTPDC1,BARX1	-3,-75222
chr12:72056303-72056842	chr12	+	72056573	72056799	True	NM_031435,NM_144982	chr12,chr12	+,-	THAP2,ZFC3H1	877,1000
chr5:159344130-159344385	chr5	+	159344152	159344416	True	NM_000679,NM_052927	chr5,chr5	+,-	ADRA1B,PWWP2A	-463,202086
chr8:62206376-62206733	chr8	+	62206494	62206782	True	NR_034003,NM_173519	chr8,chr8	-,+	LOC100130298,CLVS1	-326187,-6031
chr2:47381970-47382285	chr2	+	47381975	47382255	True	NM_020458,NM_001163561,NM_173649	chr2,chr2,chr2	+,-,-	TTC7A,C2orf61,C2orf61	-213719,312,312
chr2:239752914-239754479	chr2	+	239752993	239754449	True	NR_034162,NM_057179	chr2,chr2	-,+	FLJ43879,TWIST2	93566,2223
chr3:36898518-36899241	chr3	+	36898527	36899189	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	87409,135651
chr19:58326470-58326817	chr19	+	58326637	58326803	True	NM_001204818,NM_024762	chr19,chr19	+,-	LOC100293516,ZNF552	14858,-356
chr17:31322712-31323134	chr17	+	31322804	31323134	True	NM_173847,NM_015194	chr17,chr17	+,-	SPACA3,MYO1D	-3973,-118902
chrX:47473311-47475025	chrX	+	47473336	47475018	True	NM_006950,NM_133499,NM_003254	chrX,chrX,chrX	-,-,+	SYN1,SYN1,TIMP1	4292,4292,-31697
chr3:150170154-150170913	chr3	+	150170323	150170946	True	NM_014445,NM_014779	chr3,chr3	-,+	SERP1,TSC22D2	93535,-43594
chr2:235862767-235863162	chr2	+	235862862	235863197	True	NM_014521,NM_005737	chr2,chr2	+,-	SH3BP4,ARL4C	-2285,-457169
chr5:78810465-78810723	chr5	+	78810626	78810700	True	NM_004272,NM_001114393	chr5,chr5	-,+	HOMER1,PAPD4	-926,97542
chr13:31495253-31496483	chr13	+	31495354	31496391	True	NM_152325,NM_006644	chr13,chr13	+,-	C13orf26,HSPH1	10442,239789
chr13:114534379-114534729	chr13	+	114534547	114534689	True	NM_001143945,NM_001143946,NR_024609	chr13,chr13,chr13	-,-,+	GAS6,GAS6,FLJ44054	4378,2075,51920
chr11:62559479-62561395	chr11	+	62559563	62560429	True	NM_199337,NM_001080501	chr11,chr11	+,-	TMEM179B,TMEM223	-4740,-77
chr13:106139517-106141413	chr13	+	106139547	106141460	True	NM_004093,NM_001161812	chr13,chr13	-,+	EFNB2,DAOA	1045978,-21034
chr7:150437385-150438767	chr7	+	150437467	150438704	True	NM_001162367,NM_001101311,NM_018384	chr7,chr7,chr7	+,-,+	LOC100128542,TMEM176B,GIMAP5	8119,58967,-3082
chr5:96239735-96241308	chr5	+	96239992	96241097	True	NM_001198541,NM_022350	chr5,chr5	-,+	ERAP1,ERAP2	-90144,-28400
chr2:217474021-217475518	chr2	+	217474112	217475441	True	NM_000597,NM_000599	chr2,chr2	+,-	IGFBP2,IGFBP5	22685,84881
chr11:75477467-75478671	chr11	+	75477494	75478648	True	NM_032564,NM_207577	chr11,chr11	+,-	DGAT2,MAP6	1129,-98015
chr19:39833531-39833794	chr19	+	39833586	39833754	True	NM_018028,NM_004877	chr19,chr19	+,-	SAMD4B,GMFG	-529,-6860
chr1:150255501-150255851	chr1	+	150255590	150255898	True	NM_016022,NM_144697	chr1,chr1	-,+	APH1A,C1orf51	-14058,-412
chr17:74464091-74464328	chr17	+	74464124	74464374	True	NM_022066,NM_001088	chr17,chr17	-,+	UBE2O,AANAT	-14836,-545
chr17:79868314-79868568	chr17	+	79868318	79868612	True	NM_016538,NM_002861,NM_148896,NM_001184917,NR_033682,NR_033683,NR_033681,NR_033685	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,-,-,-,-,-	SIRT7,PCYT2,NPB,PCYT2,PCYT2,PCYT2,PCYT2,PCYT2	7496,778,-8297,778,778,515,778,515
chr12:10576551-10578381	chr12	+	10576900	10578232	True	NM_007334,NM_007333,NM_002261	chr12,chr12,chr12	+,-,-	KLRD1,KLRC3,KLRC3	-116546,-3706,-3706
chr12:10576551-10578381	chr12	+	10592470	10593090	False	NM_007334,NM_002260	chr12,chr12	+,-	KLRD1,KLRC2	-132104,-3878
chr19:52951680-52952589	chr19	+	52951684	52952614	True	NM_001099694,NM_001105549	chr19,chr19	+,-	ZNF578,ZNF83	4214,189080
chr7:98031720-98032398	chr7	+	98031759	98031881	True	NM_001159491,NM_018842	chr7,chr7	+,-	BRI3,BAIAP2L1	-120831,-1332
chr12:58086667-58087306	chr12	+	58086818	58087174	True	NM_006812,NM_001017958,NM_001122772,NM_001017957,NM_001017956	chr12,chr12,chr12,chr12,chr12	+,+,-,+,+	OS9,OS9,AGAP2,OS9,OS9	563,563,44911,563,563
chr16:14162761-14163871	chr16	+	14162765	14163849	True	NM_014048,NM_001134477	chr16,chr16	+,-	MKL2,PARN	1346,560321
chr15:51201563-51201975	chr15	+	51201563	51201693	True	NM_032802,NM_007347	chr15,chr15	-,+	SPPL2A,AP4E1	-143653,-668
chr2:3607577-3607868	chr2	+	3607711	3607861	True	NM_001011,NM_002936	chr2,chr2	+,-	RPS7,RNASEH1	14991,-1771
chr20:35168985-35169188	chr20	+	35169047	35169111	True	NM_181526,NM_032214,NM_006097	chr20,chr20,chr20	+,-,+	MYL9,SLA2,MYL9	785,105497,785
chr14:58715106-58715392	chr14	+	58715262	58715332	True	NM_152132,NM_002788,NR_029434	chr14,chr14,chr14	+,+,-	PSMA3,PSMA3,FLJ31306	-3731,-3731,49581
chr19:48495355-48497004	chr19	+	48495425	48496670	True	NM_022142,NM_001128326	chr19,chr19	+,-	ELSPBP1,BSPH1	1237,2
chr14:94383359-94385132	chr14	+	94383416	94385082	True	NM_138344,NR_027004	chr14,chr14	+,-	FAM181A,C14orf86	175,7686
chrX:67722689-67723719	chrX	+	67722885	67723637	True	NM_173834,NM_002547,NM_001195214	chrX,chrX,chrX	+,-,+	YIPF6,OPHN1,YIPF6	-4312,-69586,-4312
chr4:203315-203847	chr4	+	203374	203645	True	NM_001137608,NR_027481	chr4,chr4	-,+	ZNF732,ZNF876P	86356,2743
chr16:22104149-22104521	chr16	+	22104284	22104563	True	NM_173615,NR_033694	chr16,chr16	+,-	VWA3A,PDZD9	-478,-91853
chr4:54919694-54920048	chr4	+	54919760	54919963	True	NM_133267,NM_012110	chr4,chr4	+,-	GSX2,CHIC2	46284,10882
chr15:41710929-41712316	chr15	+	41711169	41712016	True	NM_016013,NM_015138	chr15,chr15	-,+	NDUFAF1,RTF1	-16527,-1918
chr1:12291301-12291765	chr1	+	12291370	12291643	True	NM_138346,NM_018156,NM_015378	chr1,chr1,chr1	-,+,+	KIAA2013,VPS13D,VPS13D	-304885,-1308,-1308
chr4:6782969-6783910	chr4	+	6783011	6783683	True	NM_001100590,NM_203462,NM_014743	chr4,chr4,chr4	+,-,+	KIAA0232,MRFAP1L1,KIAA0232	775,-71405,775
chr5:56512435-56513254	chr5	+	56512597	56513125	True	NM_152622,NM_001127236	chr5,chr5	-,+	MIER3,GPBP1	-264643,-2753
chr1:204651643-204652735	chr1	+	204651697	204652698	True	NM_201630,NM_001005389,NM_006338	chr1,chr1,chr1	-,+,-	LRRN2,NFASC,LRRN2	1950,145083,1834
chr1:205783080-205783341	chr1	+	205783079	205783328	True	NM_173854,NM_181644	chr1,chr1	-,+	SLC41A1,MFSD4	-918,-245018
chr3:184871197-184871442	chr3	+	184871210	184871484	True	NM_004721,NM_001025266	chr3,chr3	+,-	MAP3K13,C3orf70	209485,-408
chr1:170339429-170340158	chr1	+	170339625	170339911	True	NM_001146039,NR_026957	chr1,chr1	+,-	GORAB,LOC284688	161351,-86276
chr16:21276817-21277025	chr16	+	21276887	21277037	True	NM_001014444,NM_145865	chr16,chr16	-,+	CRYM,ANKS4B	37417,-31923
chr1:220445423-220445625	chr1	+	220445467	220445663	True	NR_001587,NM_018060,NM_012414	chr1,chr1,chr1	-,+,-	AURKAPS1,IARS2,RAB3GAP2	-4410,-178063,230
chr1:244211286-244211564	chr1	+	244211336	244211414	True	NM_005465,NM_006352,NM_205768	chr1,chr1,chr1	-,+,+	AKT3,ZNF238,ZNF238	-204783,5167,3146
chr9:128469617-128470565	chr9	+	128469701	128470088	True	NM_001006621,NM_001006619,NM_024117,NM_001006620,NM_006195,NM_001006617,NM_001006618	chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,-,-,-,+,-,-	MAPKAP1,MAPKAP1,MAPKAP1,MAPKAP1,PBX3,MAPKAP1,MAPKAP1	-188,-188,-188,-188,39528,-188,-188
chr7:102936245-102937864	chr7	+	102936345	102937781	True	NR_027768,NM_004279	chr7,chr7	-,+	DPY19L2P2,PMPCB	-15432,91
chr1:171223521-171225132	chr1	+	171223596	171225000	True	NM_002021,NR_031627	chr1,chr1	+,-	FMO1,MIR1295	-5994,-152649
chr5:176054654-176055353	chr5	+	176054811	176055365	True	NM_001099408,NM_003085,NR_036239,NM_001001502	chr5,chr5,chr5,chr5	+,-,-,-	EIF4E1B,SNCB,MIR4281,SNCB	2317,2242,1186,2242
chr15:91071300-91072059	chr15	+	91071570	91072108	True	NM_001042574,NR_028287,NM_022769	chr15,chr15,chr15	+,-,+	CRTC3,GABARAPL3,CRTC3	1089,-178891,1089
chr19:13030172-13030602	chr19	+	13030340	13030408	True	NM_001105578,NM_004343	chr19,chr19	-,+	SYCE2,CALR	-254,19005
chr14:74180309-74180596	chr14	+	74180316	74180502	True	NM_031427,NM_006029	chr14,chr14	+,-	DNAL1,PNMA1	-68791,676
chr3:32615150-32616496	chr3	+	32615260	32616273	True	NM_016141,NM_015442	chr3,chr3	-,+	DYNC1LI1,CNOT10	-2894,110424
chr8:136265734-136266772	chr8	+	136265943	136266807	True	NR_026706,NR_029599	chr8,chr8	+,-	LOC286094,MIR30D	-19621,-448755
chr5:38556969-38557285	chr5	+	38557025	38557263	True	NM_001127671,NR_037423,NM_182801	chr5,chr5,chr5	-,-,+	LIFR,MIR3650,EGFLAM	-277,450,-111440
chr11:12408491-12409276	chr11	+	12408495	12409220	True	NM_018222,NM_013253	chr11,chr11	+,-	PARVA,DKK3	-9520,-377578
chr19:35644121-35644713	chr19	+	35644351	35644673	True	NM_014164,NM_144779,NM_139284,NR_028406,NM_001164605	chr19,chr19,chr19,chr19,chr19	+,+,-,+,+	FXYD5,FXYD5,LGI4,FXYD5,FXYD5	951,998,-18173,998,1171
chr4:72620786-72621038	chr4	+	72620786	72620856	True	NM_004885,NM_000583	chr4,chr4	+,-	NPFFR2,GC	276664,29283
chrX:100912442-100912646	chrX	+	100912584	100912692	True	NM_014782,NM_177949,NM_177948	chrX,chrX,chrX	-,-,+	ARMCX2,ARMCX2,ARMCX3	2221,2221,-34284
chr3:39166602-39167321	chr3	+	39166715	39167295	True	NM_031899,NM_145755	chr3,chr3	-,+	GORASP1,TTC21A	-17585,-17614
chr5:10562558-10562794	chr5	+	10562557	10562767	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	1667,198677
chr14:104184664-104185015	chr14	+	104184663	104185001	True	NM_024071,NM_005432,NM_001198953,NM_001100118,NM_001100119	chr14,chr14,chr14,chr14,chr14	+,-,+,-,-	ZFYVE21,XRCC3,ZFYVE21,XRCC3,XRCC3	-2633,-2840,-2633,-2840,-2840
chr6:143833617-143834028	chr6	+	143833720	143833904	True	NM_032020,NM_003630	chr6,chr6	-,+	FUCA2,PEX3	-700,-61861
chr17:3627758-3628155	chr17	+	3627768	3628170	True	NM_175080,NM_031965	chr17,chr17	-,+	P2RX5,GSG2	-28070,-622
chr1:162081627-162083401	chr1	+	162081759	162083077	True	NM_014697,NM_015441	chr1,chr1	+,-	NOS1AP,OLFML2B	-42230,-88115
chr7:30635018-30635223	chr7	+	30635084	30635266	True	NM_001202482,NM_002047	chr7,chr7	-,+	CRHR2,GARS	86925,-954
chr5:5422467-5422686	chr5	+	5422538	5422644	True	NM_015325,NR_028351	chr5,chr5	+,-	KIAA0947,FLJ33360	162,914811
chr21:45584976-45585286	chr21	+	45584979	45585277	True	NM_198155,NM_015259	chr21,chr21	+,-	C21orf33,ICOSLG	-31536,75607
chr8:134418487-134419828	chr8	+	134418532	134419858	True	NR_037944,NM_006096	chr8,chr8	+,-	WISP1,NDRG1	-215301,-108985
chr17:49338352-49338902	chr17	+	49338530	49338849	True	NM_017643,NM_016001	chr17,chr17	-,+	MBTD1,UTP18	-1103,-684
chr12:54379120-54379442	chr12	+	54379119	54379409	True	NR_029617,NR_003716,NM_017409	chr12,chr12,chr12	+,-,+	MIR196A2,HOTAIR,HOXC10	6112,-16604,-224
chr2:32490787-32491047	chr2	+	32490820	32491065	True	NM_032312,NM_021209,NM_001199138,NM_001199139	chr2,chr2,chr2,chr2	+,-,-,-	YIPF4,NLRC4,NLRC4,NLRC4	11892,-8,-871,-131
chr17:6855979-6856482	chr17	+	6856273	6856376	True	NM_000697,NR_029712	chr17,chr17	+,-	ALOX12,MIR195	43007,64701
chr8:22406823-22407163	chr8	+	22406927	22407202	True	NR_027715,NM_005775	chr8,chr8	-,+	FLJ14107,SORBS3	92570,2048
chr9:76090325-76090771	chr9	+	76090330	76090820	True	NM_000689,NM_000700	chr9,chr9	-,+	ALDH1A1,ANXA1	-522097,-323600
chr15:79301938-79302157	chr15	+	79301997	79302066	True	NM_153815,NM_206839	chr15,chr15	-,+	RASGRF1,MORF4L1	-3995,-136877
chr17:45774037-45774574	chr17	+	45774074	45774544	True	NM_014726,NM_145798	chr17,chr17	+,-	TBKBP1,OSBPL7	-1495,124653
chr10:124028175-124028394	chr10	+	124028182	124028308	True	NM_017615,NM_144587	chr10,chr10	-,+	NSMCE4A,BTBD16	-293439,2512
chr13:95252798-95253962	chr13	+	95252942	95253934	True	NM_014305,NM_180989	chr13,chr13	-,+	TGDS,GPR180	-4431,169
chr20:48333893-48335078	chr20	+	48333920	48335066	True	NM_015266,NM_004776	chr20,chr20	+,-	SLC9A8,B4GALT5	94183,-3499
chr3:142725317-142726374	chr3	+	142725589	142726103	True	NM_001080415,NR_034032	chr3,chr3	+,-	U2SURP,LOC100289361	-5269,-5280
chr5:96270166-96270545	chr5	+	96270189	96270409	True	NM_001198541,NM_005575	chr5,chr5	-,+	ERAP1,LNPEP	-120341,936
chr19:44769866-44770868	chr19	+	44769956	44770774	True	NM_004234,NM_181756	chr19,chr19	-,+	ZNF235,ZNF233	38464,-5934
chr22:21053950-21054221	chr22	+	21053972	21054172	True	NM_002650,NR_026815	chr22,chr22	-,+	PI4KA,TMEM191A	34839,1229
chr22:21053950-21054221	chr22	-	22070694	22070744	False	NM_013313,NM_148176	chr22,chr22	-,+	YPEL1,PPIL2	19377,-50472
chr12:56918355-56919945	chr12	+	56918838	56919831	True	NM_013267,NM_002898	chr12,chr12	-,+	GLS2,RBMS2	-36657,-3287
chr16:74735448-74737083	chr16	+	74735453	74736913	True	NM_152649,NM_032268,NM_001142497	chr16,chr16,chr16	-,+,-	MLKL,ZNRF1,MLKL	-664,296001,-664
chr15:102500842-102501426	chr2	+	114340724	114340774	False	NR_026821,NR_024077,NR_024005	chr2,chr2,chr2	+,+,-	FAM138B,WASH2P,DDX11L2	-5816,455,18429
chr15:102500842-102501426	chr1	-	29781	30314	False	NM_001005221,NR_028325	chr1,chr1	-,+	OR4F29,LOC100132062	591770,293577
chr15:102500842-102501426	chr9	-	29559	30092	False	NM_182905,NM_203447,NR_026822	chr9,chr9,chr9	-,+,-	WASH1,DOCK8,FAM138C	10,184772,5822
chr15:102500842-102501426	chr12	+	73684	73904	True	NR_028269,NR_026823	chr12,chr12	+,-	LOC100288778,FAM138D	14079,75558
chr15:102500842-102501426	chr15	+	102500850	102501383	False	NR_026819,NR_034090	chr15,chr15	+,-	FAM138E,DDX11L9	-5813,17963
chr10:93257359-93258674	chr10	+	93257587	93258403	True	NR_024467,NM_182765	chr10,chr10	-,+	LOC100188947,HECTD2	112872,-87542
chrX:153770981-153771294	chrX	+	153771039	153771251	True	NM_003639,NM_001099856,NM_001099857,NM_001042351,NM_000402,NM_001145255	chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,-,-,+	IKBKG,IKBKG,IKBKG,G6PD,G6PD,IKBKG	4810,-631,4310,4586,4032,4310
chr1:161547650-161548953	chr1	+	161548093	161548689	True	NM_201563,NM_001127596	chr1,chr1	+,-	FCGR2C,FCGR3A	2439,-27680
chr1:161547650-161548953	chr1	+	161629933	161630264	False	NM_004001,NM_001002273,NM_001190828,NM_001002274,NM_001002275,NR_002595	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-	FCGR2B,FCGR2B,FCGR2B,FCGR2B,FCGR2B,RPL31P11	2640,2640,2640,2640,2640,24829
chr8:23565637-23566770	chr8	+	23565735	23566811	True	NM_016612,NM_001136271	chr8,chr8	+,-	SLC25A37,NKX2-6	-179423,-1813
chr12:57324113-57324335	chr12	+	57324134	57324384	True	NM_148897,NM_007264	chr12,chr12	-,+	SDR9C7,GPR182	3855,63970
chr1:247275232-247275546	chr1	+	247275241	247275491	True	NM_024804,NM_001142572,NM_207401,NM_173858	chr1,chr1,chr1,chr1	-,-,-,+	ZNF669,ZNF669,C1orf229,VN1R5	-7567,-7567,278,143882
chr20:23067783-23068950	chr20	+	23067936	23068892	True	NM_001052,NM_012072	chr20,chr20	+,-	SSTR4,CD93	-51930,-959
chr1:811069-812638	chr1	+	811912	812552	True	NR_027055,NR_015368,NM_152486	chr1,chr1,chr1	-,+,+	FAM41C,LOC643837,SAMD11	-240,-48899,48568
chr1:29139159-29139539	chr1	+	29139335	29139495	True	NM_000911,NM_005644	chr1,chr1	+,-	OPRD1,TAF12	-732,-169731
chr11:118936996-118937769	chr11	+	118937341	118937556	True	NM_021729,NM_006389,NM_001130991	chr11,chr11,chr11	+,-,-	VPS11,HYOU1,HYOU1	936,-9425,-9416
chr2:27426125-27426788	chr2	+	27426143	27426765	True	NM_016085,NR_028323,NM_021095,NM_001170795,NM_080592	chr2,chr2,chr2,chr2,chr2	+,-,-,+,+	C2orf28,SLC5A6,SLC5A6,C2orf28,C2orf28	8453,8460,8460,8453,8133
chr11:65480909-65481117	chr11	+	65480950	65481104	True	NM_182709,NM_006388,NM_182710,NM_032193	chr11,chr11,chr11,chr11	+,+,+,-	KAT5,KAT5,KAT5,RNASEH2C	-1512,-1512,-1512,7355
chr16:31482830-31483291	chr16	+	31482834	31483150	True	NM_015927,NM_001164719,NM_001042454,NM_001136509	chr16,chr16,chr16,chr16	+,+,+,-	TGFB1I1,TGFB1I1,TGFB1I1,ZNF843	1375,378,325,-28486
chr8:74793253-74793867	chr8	+	74793272	74793611	True	NM_001001481,NM_018299,NM_001040613	chr8,chr8,chr8	-,-,+	UBE2W,UBE2W,TMEM70	-2162,-2162,94765
chr11:9627399-9627822	chr11	+	9627403	9627689	True	NR_036539,NM_001143976	chr11,chr11	-,+	LOC644656,WEE1	-145158,-31227
chr3:49376502-49377128	chr3	+	49376596	49377000	True	NM_003363,NM_199443,NR_036233	chr3,chr3,chr3	-,-,+	USP4,USP4,MIR4271	586,586,-65101
chr6:47672060-47672956	chr6	+	47672076	47673009	True	NM_153838,NM_001013732	chr6,chr6	+,-	GPR115,C6orf138	-5838,363473
chr16:88878900-88879231	chr16	+	88878903	88879148	True	NM_000485,NM_001030018,NM_030928	chr16,chr16,chr16	-,-,+	APRT,APRT,CDT1	-561,-561,-8768
chr2:207668289-207669755	chr2	+	207668483	207669773	True	NR_036077,NR_036078	chr2,chr2	-,+	MIR3130-1,MIR3130-2	-20451,-20576
chr16:30384889-30386142	chr16	+	30385179	30386083	True	NM_013292,NM_015527,NM_052838	chr16,chr16,chr16	+,-,-	MYLPF,TBC1D10B,SEPT1	39,-3657,8138
chr6:71134454-71135526	chr6	+	71134487	71135096	True	NM_001851,NM_001162529	chr6,chr6	-,+	COL9A1,FAM135A	-121701,1045
chr2:173941121-173941418	chr2	+	173941200	173941405	True	NR_033882,NM_016653,NM_133646	chr2,chr2,chr2	-,+,+	LOC339751,ZAK,ZAK	205414,-686,-686
chr1:93427198-93427399	chr1	+	93427197	93427301	True	NM_001006605,NM_001164391	chr1,chr1	-,+	FAM69A,MTF2	-118,117490
chr19:50982319-50983192	chr19	+	50982612	50983066	True	NM_206538,NM_138411,NM_175063	chr19,chr19,chr19	+,-,+	C19orf63,FAM71E1,C19orf63	-2934,-2609,-2934
chr1:151346398-151346675	chr1	+	151346441	151346719	True	NM_002796,NM_003944	chr1,chr1	+,-	PSMB4,SELENBP1	25321,-1277
chr17:5972543-5972906	chr17	+	5972604	5972905	True	NM_001033054,NM_015253	chr17,chr17	-,+	AIPL1,WSCD1	365664,1028
chr1:228137215-228137738	chr1	+	228137268	228137762	True	NM_033131,NM_003395	chr1,chr1	+,-	WNT3A,WNT9A	56960,-1592
chr20:23860829-23861438	chr20	+	23860883	23861401	True	NM_001900,NR_001279	chr20,chr20	-,+	CST5,CSTT	-503,-361153
chr20:62613816-62614374	chr20	+	62613848	62614346	True	NM_080621,NM_012469	chr20,chr20	-,+	SAMD10,PRPF6	-2853,-1468
chr18:60194139-60194654	chr18	+	60194191	60194665	True	NM_176787,NM_017742	chr18,chr18	-,+	PIGN,ZCCHC2	-339902,-3584
chr5:54272672-54274521	chr5	+	54272710	54274555	True	NM_002104,NM_007036,NM_001135604	chr5,chr5,chr5	+,-,-	GZMK,ESM1,ESM1	45551,6909,6909
chr16:47145615-47146409	chr16	+	47145653	47146214	True	NM_001142466,NM_001201477	chr16,chr16	+,-	GPT2,NETO2	-226602,31779
chr12:107467429-107468647	chr12	+	107467529	107468524	True	NM_004075,NM_152261	chr12,chr12	-,+	CRY1,C12orf23	19131,-118044
chr4:111558033-111558291	chr4	+	111558049	111558339	True	NM_153426,NM_153427,NM_001977,NM_001204399,NM_001204398,NM_001204397	chr4,chr4,chr4,chr4,chr4,chr4	-,-,+,-,-,-	PITX2,PITX2,ENPEP,PITX2,PITX2,PITX2	4990,4990,-160871,4990,4990,4990
chr9:19103037-19103313	chr9	+	19103070	19103329	True	NM_006570,NM_017645	chr9,chr9	+,-	RRAGA,HAUS6	-53749,-168
chr6:154832341-154833154	chr6	+	154832621	154833143	True	NM_173515,NM_014892	chr6,chr6	-,+	CNKSR3,SCAF8	-868,221368
chr19:10231642-10232310	chr19	+	10231670	10231824	True	NM_002566,NM_003755	chr19,chr19	+,-	P2RY11,EIF3G	-9524,-1071
chr20:44420094-44420551	chr20	+	44420238	44420586	True	NM_080614,NM_052951	chr20,chr20	-,+	WFDC3,DNTTIP1	11,-11
chr5:132164744-132165179	chr5	+	132164754	132165226	True	NM_001172700,NM_175873,NM_133456	chr5,chr5,chr5	-,+,-	SHROOM1,ANKRD43,SHROOM1	1414,-15772,-2752
chr6:41244786-41245232	chr6	+	41244892	41245248	True	NR_002794,NM_018643	chr6,chr6	+,-	TREML2P1,TREM1	-27834,9259
chr16:29273909-29274121	chr16	+	29273947	29274130	True	NR_002939,NM_001031827	chr16,chr16	+,-	RUNDC2C,BOLA2	28410,192212
chr16:29273909-29274121	chr16	+	88269212	88269291	False	NM_001127464,NM_001739	chr16,chr16	+,-	ZNF469,CA5A	224587,-299100
chr4:48984904-48986387	chr4	+	48984913	48985779	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	2485,-76098
chr18:3379493-3380535	chr18	+	3379493	3380376	True	NM_019856,NM_174886	chr18,chr18	-,+	MYOM1,TGIF1	-159387,31695
chr9:130523983-130524467	chr9	+	130524127	130524497	True	NM_001142532,NM_001142533,NM_001142531,NM_001142534,NR_036055,NM_005489	chr9,chr9,chr9,chr9,chr9,chr9	-,-,-,-,+,-	SH2D3C,SH2D3C,SH2D3C,SH2D3C,MIR2861,SH2D3C	250,-6544,272,-6566,23699,9174
chr2:103389092-103390845	chr2	+	103389122	103390268	True	NM_144632,NM_032718	chr2,chr2	+,-	TMEM182,MFSD9	-10688,-35785
chr10:18635360-18637176	chr10	+	18635363	18637074	True	NM_182543,NM_201590	chr10,chr10	-,+	NSUN6,CACNB2	303533,-5808
chr16:75287091-75287677	chr16	+	75287150	75287601	True	NM_001170719,NM_001906,NM_001170717,NM_014567	chr16,chr16,chr16,chr16	-,+,-,-	BCAR1,CTRB1,BCAR1,BCAR1	-4926,-34317,-1624,-1624
chr11:67723364-67724154	chr11	+	67723855	67723989	True	NM_030930,NM_001161473	chr11,chr11	-,+	UNC93B1,ALDH3B1	47654,52058
chr2:228010651-228011394	chr2	+	228010650	228011238	True	NM_000091,NM_000092	chr2,chr2	+,-	COL4A3,COL4A4	18042,18095
chr1:150722284-150722803	chr1	+	150722495	150722839	True	NM_001199739,NM_001145415	chr1,chr1	-,+	CTSS,SETDB1	15650,175975
chr1:203154538-203155015	chr1	+	203154620	203155048	True	NM_001276,NM_004997,NM_001048230	chr1,chr1,chr1	-,-,+	CHI3L1,MYBPH,ADORA1	924,-9678,-57837
chr19:48894253-48894523	chr19	+	48894487	48894565	True	NM_006801,NM_000836	chr19,chr19	-,+	KDELR1,GRIN2D	295,3566
chr1:9354514-9355464	chr1	+	9354669	9355371	True	NM_025106,NR_029610	chr1,chr1	+,-	SPSB1,MIR34A	-1787,-142833
chr17:27715814-27716198	chr17	+	27715967	27716115	True	NM_025142,NM_020791,NM_020772	chr17,chr17,chr17	+,+,-	TAOK1,TAOK1,NUFIP2	1827,1827,-94801
chr17:73281446-73282245	chr17	+	73281500	73282190	True	NM_021734,NM_001126122,NM_001126121,NR_036520	chr17,chr17,chr17,chr17	-,-,-,+	SLC25A19,SLC25A19,SLC25A19,LOC100287042	3390,3390,3390,-14178
chr22:30000202-30001195	chr22	+	30000203	30000938	True	NM_016418,NM_003634,NM_181825,NM_181832,NM_181833,NM_181830,NM_181831,NM_000268,NM_181829,NM_181828	chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22	+,-,+,+,+,+,+,+,+,+	NF2,NIPSNAP1,NF2,NF2,NF2,NF2,NF2,NF2,NF2,NF2	-709,-22877,-709,-709,-709,-709,-709,-709,-709,-709
chr11:120893503-120894733	chr11	+	120893504	120894672	True	NM_001130047,NM_012101,NM_152715	chr11,chr11,chr11	+,-,+	TBCEL,TRIM29,TBCEL	130,-884641,140
chr5:124067441-124069252	chr5	+	124068402	124069225	True	NM_004384,NM_020747	chr5,chr5	+,-	CSNK1G3,ZNF608	-1220661,11637
chr12:1930333-1931040	chr12	+	1930501	1931081	True	NM_001039029,NM_001163925,NM_001163926,NM_172364	chr12,chr12,chr12,chr12	+,+,+,-	LRTM2,LRTM2,LRTM2,CACNA2D4	-1119,-1119,-1119,96839
chr1:161992691-161993168	chr1	+	161992707	161993214	True	NM_001164757,NM_015441	chr1,chr1	+,-	NOS1AP,OLFML2B	46366,480
chr17:47043772-47044370	chr17	+	47044228	47044394	True	NM_001160423,NM_004123	chr17,chr17	+,-	IGF2BP1,GIP	30379,1611
chr1:94343782-94344554	chr1	+	94343900	94344404	True	NM_014597,NR_030621	chr1,chr1	-,+	DNTTIP2,MIR760	412,-31563
chr11:65607480-65608506	chr11	+	65607805	65608005	True	NM_005507,NM_152760	chr11,chr11	-,+	CFL1,SNX32	17850,-6459
chr1:113261792-113262548	chr1	+	113261881	113262433	True	NM_182759,NM_005167,NM_001004440	chr1,chr1,chr1	+,-,+	FAM19A3,PPM1J,FAM19A3	755,-3931,755
chr19:40853599-40854055	chr19	+	40853671	40854015	True	NM_012268,NM_001031696,NM_178830	chr19,chr19,chr19	+,+,-	PLD3,PLD3,C19orf47	316,316,328
chr4:108851869-108852525	chr4	+	108851967	108852439	True	NM_005443,NM_183075	chr4,chr4	-,+	PAPSS1,CYP2U1	-210548,277
chrX:153658758-153659442	chrX	+	153658947	153659363	True	NM_001009934,NM_001493,NM_001183	chrX,chrX,chrX	-,+,+	DNASE1L1,GDI1,ATP6AP1	-18520,5895,-2021
chr3:49896540-49896854	chr3	+	49896737	49896801	True	NM_005879,NM_203370	chr3,chr3	-,+	TRAIP,C3orf54	-2745,-56101
chr9:133585533-133586855	chr9	+	133585685	133586629	True	NM_007313,NR_027440	chr9,chr9	+,-	ABL1,LOC100272217	2638,-130804
chr3:174666125-174667828	chr3	+	174666562	174667789	True	NM_207015,NM_031955	chr3,chr3	+,-	NAALADL2,SPATA16	-89509,-1807504
chr21:45605271-45605677	chr21	+	45605479	45605607	True	NM_198155,NM_015259	chr21,chr21	+,-	C21orf33,ICOSLG	-52036,55277
chr11:117102904-117103199	chr11	+	117103023	117103095	True	NM_004716,NM_207343,NM_001077239	chr11,chr11,chr11	-,+,+	PCSK7,RNF214,RNF214	-212,308,356
chr3:45933107-45934386	chr3	+	45933107	45934319	True	NM_020347,NM_006641,NM_031200,NR_036525	chr3,chr3,chr3,chr3	-,+,+,+	LZTFL1,CCR9,CCR9,CCR9	-49486,-5162,-5162,-5162
chr17:3341645-3342204	chr17	+	3341709	3342213	True	NM_012373,NM_003554	chr17,chr17	+,-	OR3A3,OR1E2	-17904,-4574
chr12:120765504-120766638	chr12	+	120765527	120766471	True	NM_000928,NM_012240	chr12,chr12	-,+	PLA2G1B,SIRT4	65,-25454
chr2:107157312-107159311	chr2	+	107157344	107158707	True	NM_001144013,NR_003506	chr2,chr2	-,+	RGPD3,PLGLA	-72543,-154626
chr4:48261587-48261942	chr4	+	48261829	48261991	True	NM_020846,NM_003215	chr4,chr4	+,-	SLAIN2,TEC	81621,9873
chr7:98473047-98474130	chr7	+	98473093	98473714	True	NR_037403,NM_001134450,NM_001134451,NM_152913,NM_003496	chr7,chr7,chr7,chr7,chr7	+,-,-,-,+	MIR3609,TMEM130,TMEM130,TMEM130,TRRAP	5558,-5420,-5420,-5420,2398
chr11:62381328-62381729	chr11	+	62381430	62381772	True	NM_153265,NM_012200,NM_000327	chr11,chr11,chr11	-,-,+	EML3,B3GAT3,ROM1	-1193,7726,-1268
chr12:53099534-53101055	chr12	+	53099825	53100992	True	NM_199187,NM_175078	chr12,chr12	+,-	KRT18,KRT77	241662,-2578
chr17:80675315-80676231	chr17	+	80675678	80676192	True	NM_024619,NM_006822	chr17,chr17	+,-	FN3KRP,RAB40B	-1147,-19080
chr4:29136684-29136975	chr4	+	29136689	29136993	True	NR_036237,NM_000730	chr4,chr4	+,-	MIR4275,CCKAR	-315543,-2644647
chr20:42193945-42194647	chr20	+	42193994	42194648	True	NM_016276,NM_001199264,NM_001008901,NM_170693	chr20,chr20,chr20,chr20	+,+,-,+	SGK2,SGK2,GTSF1L,SGK2	88,-290,161044,-6410
chr16:58596649-58598597	chr16	+	58596740	58598326	True	NR_002980,NM_024860	chr16,chr16	-,+	SNORA50,SETD6	-2905,-47416
chr6:170634648-170635985	chr6	+	170635191	170635821	True	NM_032448,NM_005618	chr6,chr6	+,-	FAM120B,DLL1	-19409,-35494
chr7:156685574-156685774	chr7	+	156685618	156685758	True	NM_022458,NM_138400	chr7,chr7	-,+	LMBR1,NOM1	194,56658
chr14:74003314-74003778	chr14	+	74003406	74003654	True	NM_203309,NM_001037161	chr14,chr14	-,+	HEATR4,ACOT1	22047,273
chr19:54782611-54782811	chr19	+	54782622	54782748	True	NM_001013,NM_005874,NM_001080978	chr19,chr19,chr19	+,-,-	RPS9,LILRB2,LILRB2	-77947,2335,2335
chr5:760101-760611	chr5	+	760268	760556	True	NM_001166260,NM_007030	chr5,chr5	+,-	TRIP13,TPPP	132412,-66758
chr7:6096854-6098469	chr7	+	6097079	6098278	True	NM_001134335,NM_032172,NM_014413	chr7,chr7,chr7	-,+,-	EIF2AK1,USP42,EIF2AK1	643,46271,643
chr9:134150801-134151004	chr9	+	134150807	134150995	True	NM_032728,NM_033387	chr9,chr9	+,-	PPAPDC3,FAM78A	14085,961
chr3:42813483-42814196	chr3	+	42813794	42814148	True	NM_001296,NM_144719	chr3,chr3	+,-	CCBP2,CCDC13	36815,647
chr6:24721526-24722741	chr6	+	24721747	24722438	True	NM_030939,NM_015895	chr6,chr6	-,+	C6orf62,GMNN	-2344,52725
chrX:86776803-86778685	chrX	+	86776843	86778698	True	NM_019117,NM_001145414,NM_057162	chrX,chrX,chrX	+,-,+	KLHL4,CHM,KLHL4	-4179,-1474277,-4179
chr3:149881303-149882097	chr3	+	149881302	149881984	True	NM_053024,NR_036538	chr3,chr3	-,+	PFN2,LOC646903	-192561,-192292
chr10:64330949-64332819	chr10	+	64330971	64332801	True	NM_000399,NM_199452	chr10,chr10	-,+	EGR2,ZNF365	243375,-50815
chrX:148864572-148864782	chrX	+	148864605	148864677	True	NM_016153,NM_001164415,NM_032508,NM_005365,NM_001080790	chrX,chrX,chrX,chrX,chrX	+,+,-,+,+	HSFX1,HSFX2,TMEM185A,MAGEA9,MAGEA9B	-8930,-8930,-151118,-1056,-1063
chrX:148864572-148864782	chrX	-	148668030	148668102	False	NM_016153,NM_001164415,NM_005365,NM_001171909,NM_001080790	chrX,chrX,chrX,chrX,chrX	-,-,-,+,-	HSFX1,HSFX2,MAGEA9,CXorf40A,MAGEA9B	8922,8922,1057,-42015,1064
chr20:2845357-2845781	chr20	+	2845361	2845731	True	NM_002836,NM_022760,NM_080840	chr20,chr20,chr20	+,-,+	PTPRA,FAM113A,PTPRA	-571,-24029,8410
chr1:89727392-89728476	chr1	+	89727512	89728506	True	NM_198460,NM_001134486	chr1,chr1	+,-	GBP6,GBP5	100929,10088
chr17:4049982-4051001	chr17	+	4050125	4050824	True	NM_144611,NM_015113,NR_023346,NR_023347	chr17,chr17,chr17,chr17	+,-,+,+	CYB5D2,ZZEF1,CYB5D2,CYB5D2	-3714,-3872,-3714,-3714
chr22:19931530-19931788	chr22	+	19931572	19931786	True	NM_006440,NM_001135161,NM_000754,NM_001135162	chr22,chr22,chr22,chr22	-,+,+,+	TXNRD2,COMT,COMT,COMT	-2213,6673,-2360,7258
chr9:136274908-136275134	chr9	+	136274969	136275051	True	NR_024514,NM_020385	chr9,chr9	+,-	ADAMTS13,REXO4	4407,8163
chr16:20923347-20923682	chr16	+	20923433	20923597	True	NM_001128302,NM_173475	chr16,chr16	+,-	LYRM1,DCUN1D3	-11411,-11872
chr2:103338458-103339782	chr2	+	103338497	103339600	True	NM_144632,NM_032718	chr2,chr2	+,-	TMEM182,MFSD9	38889,13794
chr5:76152923-76153415	chr5	+	76153170	76153301	True	NR_003014,NM_130772	chr5,chr5	-,+	SNORA47,S100Z	223146,-7407
chr19:4472889-4473106	chr19	+	4472930	4472990	True	NM_025241,NM_032631,NM_001001520	chr19,chr19,chr19	-,+,+	UBXN6,HDGFRP2,HDGFRP2	-15139,-726,-726
chr2:231580574-231581569	chr2	+	231580734	231581165	True	NM_001130850,NM_005683,NM_001130849,NM_016289	chr2,chr2,chr2,chr2	+,-,+,+	CAB39,GPR55,CAB39,CAB39	-2529,208839,-2529,-3235
chr6:168281193-168282327	chr6	+	168281683	168282371	True	NR_027906,NM_001040000	chr6,chr6	-,+	C6orf124,MLLT4	-54207,-54070
chr8:26156235-26158224	chr8	+	26156261	26158073	True	NM_001177591,NM_007257,NM_002717	chr8,chr8,chr8	+,-,+	PPP2R2A,PNMA2,PPP2R2A	-5585,213473,-7310
chr15:93329008-93329704	chr15	+	93329173	93329506	True	NR_033769,NM_207446	chr15,chr15	+,-	ASB9P1,FAM174B	9207,-130142
chr18:77905789-77906218	chr18	+	77905813	77906265	True	NM_032510,NR_028339	chr18,chr18	-,+	PARD6G,LOC100130522	99182,-57
chr5:140755400-140755856	chr5	+	140755460	140755878	True	NM_018924,NM_032086,NM_018920,NM_032097,NM_018919,NM_005642,NM_032087	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,-,+	PCDHGB3,PCDHGA6,PCDHGA7,PCDHGB3,PCDHGA6,TAF7,PCDHGA7	-5549,-1860,6588,-5549,-1860,-55109,6588
chr7:100861395-100861676	chr7	+	100861428	100861504	True	NM_001084,NM_006349	chr7,chr7	-,+	PLOD3,ZNHIT1	-417,-494
chr17:42201629-42201921	chr17	+	42201646	42201891	True	NM_001015053,NM_001171251,NM_005474	chr17,chr17,chr17	-,+,-	HDAC5,C17orf53,HDAC5	-632,17382,-632
chrX:13586823-13587433	chrX	+	13586844	13587363	True	NM_001011658,NM_001167890,NM_015507	chrX,chrX,chrX	-,+,+	TRAPPC2,EGFL6,EGFL6	165442,330,330
chr12:45615197-45615541	chr12	+	45615246	45615542	True	NM_001142679,NR_037144,NM_001025356,NM_001142680,NM_001204803	chr12,chr12,chr12,chr12,chr12	+,-,+,+,+	ANO6,PLEKHA8P1,ANO6,ANO6,ANO6	-5527,-5457,-5527,-5421,-5527
chr1:26515858-26516621	chr1	+	26515901	26516519	True	NM_198137,NM_001077262	chr1,chr1	+,-	CATSPER4,UBXN11	599,116726
chr2:122518740-122519727	chr2	+	122518889	122519259	True	NM_032390,NM_004622	chr2,chr2	-,+	MKI67IP,TSN	-24386,-5826
chr6:18394751-18395636	chr6	+	18394942	18395675	True	NM_182757,NM_003472	chr6,chr6	+,-	RNF144B,DEK	-7419,-130143
chr2:230783986-230784784	chr2	+	230784195	230784782	True	NM_174899,NM_004238	chr2,chr2	+,-	FBXO36,TRIP12	2424,1928
chr22:24647136-24647503	chr22	+	24647279	24647551	True	NM_001099782,NM_001099781,NM_004121,NR_003714	chr22,chr22,chr22,chr22	-,-,-,+	GGT5,GGT5,GGT5,POM121L9P	-6169,-6169,-6169,37
chr22:24647136-24647503	chr22	-	25055151	25055201	False	NR_024593,NR_024494	chr22,chr22	-,+	POM121L10P,BCRP3	-37,-26320
chr1:28970935-28971278	chr1	+	28970984	28971206	True	NM_001135218,NM_005644,NR_004407	chr1,chr1,chr1	-,-,+	TAF12,TAF12,RNU11	-1380,-1380,3905
chr10:88411919-88412412	chr10	+	88412033	88412409	True	NM_033282,NM_015045,NM_001030015	chr10,chr10,chr10	+,-,+	OPN4,WAPAL,OPN4	1904,-130492,1904
chr14:50359180-50359621	chr14	+	50359205	50359618	True	NM_004713,NM_001663	chr14,chr14	-,+	NEMF,ARF6	-39666,117
chr11:113184673-113184934	chr11	+	113184738	113184988	True	NM_017868,NR_034101	chr11,chr11	+,-	TTC12,LOC100288346	262,-40115
chr5:158527005-158527449	chr5	+	158527101	158527451	True	NM_024007,NM_145049	chr5,chr5	-,+	EBF1,UBLCP1	-313,162637
chr9:90587547-90588184	chr9	+	90587586	90588119	True	NM_001039803,NM_001145124,NM_001170640,NM_178432,NM_001170639,NM_012119	chr9,chr9,chr9,chr9,chr9,chr9	-,+,-,-,-,-	CDK20,FAM75C1,CDK20,CDK20,CDK20,CDK20	1627,-54760,1627,1627,1627,1627
chr1:70819544-70819745	chr1	+	70819644	70819708	True	NM_030816,NR_027404,NM_001036645,NM_001036646,NM_001031693	chr1,chr1,chr1,chr1,chr1	-,+,+,+,+	ANKRD13C,HHLA3,HHLA3,HHLA3,HHLA3	759,784,784,784,784
chr1:54423863-54424714	chr1	+	54423884	54424173	True	NM_052940,NM_016126	chr1,chr1	+,-	LRRC42,HSPB11	-11899,-12596
chr12:56475682-56477567	chr12	+	56475960	56477597	True	NM_001982,NM_001130420,NM_001005915	chr12,chr12,chr12	+,-,+	ERBB3,SMARCC2,ERBB3	-2202,105804,-2119
chr20:393664-394365	chr20	+	393663	394288	True	NM_144628,NM_031229,NM_006462	chr20,chr20,chr20	-,+,+	TBC1D20,RBCK1,RBCK1	48950,-5008,-5008
chr8:22963365-22963647	chr8	+	22963393	22963635	True	NM_003841,NR_027140	chr8,chr8	+,-	TNFRSF10C,TNFRSF10B	-3119,-36693
chr19:853409-854163	chr19	+	853542	854066	True	NM_001972,NM_001928,NM_024888	chr19,chr19,chr19	+,+,-	ELANE,CFD,LPPR3	-1302,5598,-31590
chr3:179043102-179043401	chr3	+	179043101	179043357	True	NM_016331,NM_171828	chr3,chr3	+,-	ZNF639,KCNMB3	-1609,-58263
chr14:78869599-78869929	chr14	+	78869628	78869922	True	NM_004796,NM_012245	chr14,chr14	+,-	NRXN3,SNW1	170,-642131
chr12:54020280-54021251	chr12	+	54020328	54020936	True	NM_006856,NM_001130060,NM_134324	chr12,chr12,chr12	-,-,+	ATF7,ATF7,TARBP2	-129,-129,-125002
chr1:147014796-147015594	chr1	+	147014827	147015556	True	NM_004326,NM_016361	chr1,chr1	+,-	BCL9,ACP6	-1697,127128
chr13:76124047-76124367	chr13	+	76124052	76124412	True	NM_203497,NM_006002	chr13,chr13	-,+	COMMD6,UCHL3	-12061,-176
chr11:61126123-61128082	chr11	+	61126228	61128107	True	NM_153611,NM_016464,NM_001161452,NM_001161454,NR_028473	chr11,chr11,chr11,chr11,chr11	-,+,-,-,+	CYBASC3,TMEM138,CYBASC3,CYBASC3,TMEM138	1698,1365,-1867,1698,1365
chr9:709323-710337	chr9	+	709336	710347	True	NM_152569,NM_153186	chr9,chr9	-,+	C9orf66,KANK1	-493443,-2491
chr12:62867644-62868295	chr12	+	62867658	62867825	True	NM_175895,NM_015026	chr12,chr12	-,+	C12orf61,MON2	129452,-7112
chr1:44397844-44398098	chr1	+	44397945	44398147	True	NM_057090,NM_001136215,NM_006934,NM_057091	chr1,chr1,chr1,chr1	+,+,-,+	ARTN,ARTN,SLC6A9,ARTN	844,844,84900,844
chr22:25421711-25422188	chr22	+	25421839	25422080	True	NM_001001663,NM_001145206	chr22,chr22	-,+	TMEM211,KIAA1671	-86525,1860
chr7:155327443-155328003	chr7	+	155327447	155327985	True	NM_001103176,NM_001427	chr7,chr7	-,+	CNPY1,EN2	-908,-76674
chr5:785972-786214	chr5	+	786036	786214	True	NM_001166260,NM_024786	chr5,chr5	+,-	TRIP13,ZDHHC11	106754,64937
chr5:785972-786214	chr5	+	694704	694882	False	NM_018140,NM_007030	chr5,chr5	+,-	CEP72,TPPP	-82350,-1194
chr17:67703752-67704472	chr17	+	67703912	67704451	True	NM_172232,NM_002758	chr17,chr17	-,+	ABCA5,MAP2K6	-380589,-293125
chr22:34985110-34985350	chr22	+	34985117	34985347	True	NM_001008494,NM_133642	chr22,chr22	+,-	ISX,LARGE	476782,-668701
chr17:71223899-71224141	chr17	+	71223899	71224167	True	NM_032837,NM_001100621,NM_001100622,NM_001098832,NM_017941	chr17,chr17,chr17,chr17,chr17	-,+,+,-,+	FAM104A,C17orf80,C17orf80,FAM104A,C17orf80	4418,4608,4608,4418,4608
chr7:74304709-74305546	chr7	+	74305016	74305278	True	NR_027777,NR_027776,NM_001025202,NR_027775	chr7,chr7,chr7,chr7	+,+,-,+	PMS2P5,PMS2P5,STAG3L2,PMS2P5	1615,1615,1511,1615
chr7:74304709-74305546	chr7	+	72474759	72475013	False	NM_001013739,NR_003614	chr7,chr7	-,+	STAG3L3,PMS2L2	1500,1666
chr7:74304709-74305546	chr7	-	74989883	74990137	False	NR_003614,NM_001002840,NM_018991	chr7,chr7,chr7	-,+,+	PMS2L2,STAG3L1,STAG3L1	-1668,-1495,-1495
chr10:79689456-79690196	chr10	+	79689546	79690066	True	NR_024585,NM_004747	chr10,chr10	+,-	LOC100128292,DLG5	-3034,-3198
chr1:205770418-205770871	chr1	+	205770573	205770865	True	NM_173854,NM_181644	chr1,chr1	-,+	SLC41A1,MFSD4	11346,-232512
chr8:143961139-143962443	chr8	+	143961219	143961511	True	NM_001026213,NM_002066,NM_000497	chr8,chr8,chr8	-,+,-	CYP11B1,GML,CYP11B1	-5,-45053,-5
chr5:73991588-73992681	chr5	+	73991680	73992567	True	NM_003633,NM_000521	chr5,chr5	-,+	ENC1,HEXB	-54431,-10772
chr1:247514658-247515755	chr1	+	247514994	247515708	True	NM_032752,NM_001079821	chr1,chr1	-,+	ZNF496,NLRP3	-19949,63749
chr16:83931289-83932348	chr16	+	83931381	83932281	True	NM_001080442,NM_012213	chr16,chr16	-,+	SLC38A8,MLYCD	143531,448
chr8:92053107-92053716	chr8	+	92053295	92053763	True	NM_016023,NM_018710	chr8,chr8	+,-	OTUD6B,TMEM55A	28660,-92
chr18:19285334-19286133	chr18	+	19285407	19286032	True	NM_138340,NR_031565	chr18,chr18	-,+	ABHD3,MIR320C1	-641,-21992
chr17:72524420-72525650	chr17	+	72524459	72525387	True	NM_152460,NM_174892	chr17,chr17	+,-	C17orf77,CD300LB	55669,2276
chr3:197472408-197472829	chr3	+	197472524	197472634	True	NM_032288,NM_001145642,NR_027840,NM_001011537,NM_014687	chr3,chr3,chr3,chr3,chr3	+,-,+,+,-	FYTTD1,KIAA0226,FYTTD1,FYTTD1,KIAA0226	3989,3984,4626,3789,-8751
chr4:2060188-2060397	chr4	+	2060210	2060342	True	NM_005663,NM_178557	chr4,chr4	-,+	WHSC2,NAT8L	-49251,896
chr9:137532411-137533038	chr9	+	137532417	137533036	True	NR_037469,NM_000093	chr9,chr9	-,+	MIR3689B,COL5A1	209132,615
chr3:122940240-122941336	chr3	+	122940337	122941389	True	NM_012430,NM_001031702,NM_001199642	chr3,chr3,chr3	+,-,-	SEC22A,SEMA5B,ADCY5	-19621,-193761,193856
chr4:25253871-25254255	chr4	+	25253870	25254104	True	NM_018323,NM_016955	chr4,chr4	+,-	PI4K2B,SEPSECS	-18270,-91666
chr10:74871029-74871828	chr10	+	74871039	74871643	True	NM_001142596,NM_015901	chr10,chr10	-,+	P4HA1,NUDT13	-14307,-880
chr1:202612191-202612416	chr1	+	202612191	202612357	True	NM_001136504,NM_001197131	chr1,chr1	-,+	SYT2,PPP1R12B	274,-103000
chr1:89351355-89352760	chr1	+	89351636	89352387	True	NM_006256,NM_001514	chr1,chr1	+,-	PKN2,GTF2B	-201765,4971
chr22:25346531-25347554	chr22	+	25346825	25347363	True	NM_001145206,NM_001001663	chr22,chr22	+,-	KIAA1671,TMEM211	76577,-11511
chr11:74696239-74697739	chr11	+	74696334	74697775	True	NM_006656,NM_182969	chr11,chr11	+,-	NEU3,XRRA1	2174,-36102
chr11:129003709-129005382	chr11	+	129003859	129005309	True	NM_001142685,NM_003658	chr11,chr11	-,+	ARHGAP32,BARX2	56836,240571
chr7:4999107-5000147	chr7	+	4999898	5000184	True	NM_198403,NR_015449,NM_001100600	chr7,chr7,chr7	-,+,-	MMD2,RNF216L,MMD2	-1054,13431,-1054
chr7:44197481-44198065	chr7	+	44197559	44198049	True	NM_006555,NM_033507,NM_033508	chr7,chr7,chr7	+,-,-	YKT6,GCK,GCK	42528,888,888
chr16:65268627-65269093	chr7	+	143239434	143239645	False	NM_005232,NM_001008747	chr7,chr7	-,+	EPHA1,CTAGE15P	-133449,29244
chr16:65268627-65269093	chr7	-	143484001	143484212	False	NM_178561,NM_001130026	chr7,chr7	-,+	CTAGE6P,FAM115C	-29158,-71274
chr16:65268627-65269093	chr6	+	114748843	114749054	False	NR_027060,NM_153612	chr6,chr6	+,-	FLJ34503,HS3ST5	-523504,-364802
chr16:65268627-65269093	chr4	+	80480242	80480504	False	NM_033214,NR_026555	chr4,chr4	-,+	GK2,GDEP	-150870,268120
chr16:65268627-65269093	chr4	+	168362062	168362273	False	NM_001204359,NM_007193	chr4,chr4	-,+	SPOCK3,ANXA10	-206321,651414
chr16:65268627-65269093	chr8	-	100956328	100956521	False	NM_004374,NM_005034	chr8,chr8	-,+	COX6C,POLR2K	-50086,206317
chr16:65268627-65269093	chr12	-	4128134	4128328	True	NM_001759,NM_020367	chr12,chr12	+,-	CCND2,PARP11	254573,-145526
chr16:65268627-65269093	chr16	+	65268765	65268825	False	NM_001795,NM_001797	chr16,chr16	+,-	CDH5,CDH11	1131699,-112846
chr3:79815727-79816440	chr3	+	79815995	79816427	True	NM_001128929,NM_002941	chr3,chr3	+,-	ROBO2,ROBO1	-2668883,682
chr16:30621673-30621927	chr16	+	30621689	30621901	True	NM_138447,NM_024031	chr16,chr16	-,+	ZNF689,PRR14	-7,40339
chr19:16605263-16605959	chr19	+	16605535	16605949	True	NM_145046,NM_032207	chr19,chr19	-,+	CALR3,C19orf44	1104,1255
chr20:18576869-18578813	chr20	+	18576973	18578467	True	NM_006606,NM_080820	chr20,chr20	-,+	RBBP9,DTD1	-99086,-8481
chr15:34640186-34640507	chr15	+	34640300	34640508	True	NM_018648,NM_175741	chr15,chr15	-,+	NOP10,C15orf55	-4938,-2285
chr9:123964632-123965120	chr9	+	123964713	123964957	True	NM_001127662,NM_016322	chr9,chr9	+,-	GSN,RAB14	65422,-348
chr13:33784413-33785894	chr13	+	33784449	33785939	True	NM_004795,NM_052851	chr13,chr13	+,-	KL,STARD13	-193929,-4262
chr17:882251-882535	chr17	+	882264	882583	True	NM_022463,NM_013337	chr17,chr17	-,+	NXN,TIMM22	477,17773
chr17:39158443-39159880	chr17	+	39158815	39159596	True	NM_031959,NM_031958,NM_033061,NM_033185	chr17,chr17,chr17,chr17	-,-,+,-	KRTAP3-2,KRTAP3-1,KRTAP4-7,KRTAP3-3	-2677,5825,80862,-8430
chr19:46107116-46107469	chr19	+	46107282	46107361	True	NM_005282,NM_000164	chr19,chr19	-,+	GPR4,GIPR	-1816,64140
chr19:9938601-9938803	chr19	+	9938606	9938784	True	NM_001048241,NM_024292,NM_006221,NM_017703	chr19,chr19,chr19,chr19	+,+,+,-	UBL5,UBL5,PIN1,FBXL12	-89,-89,7214,-8875
chr20:37064007-37065796	chr20	+	37064101	37065684	True	NR_015366,NR_027241,NR_002911,NR_003239,NR_003017,NR_003018	chr20,chr20,chr20,chr20,chr20,chr20	-,-,-,+,-,-	LOC388796,LOC388796,SNORA71A,SNHG11,SNORA71C,SNORA71D	-139,-83,-8015,9612,-5654,-1459
chrX:13589003-13590985	chrX	+	13589048	13590672	True	NM_001011658,NM_001167890,NM_015507	chrX,chrX,chrX	-,+,+	TRAPPC2,EGFL6,EGFL6	162134,-1411,-1411
chrY:6745408-6746523	chrY	+	6745460	6746542	True	NM_001143,NM_033284	chrY,chrY	-,+	AMELY,TBL1Y	-3392,32184
chr17:18365744-18366682	chr17	+	18365809	18366645	True	NR_003554,NM_001040078	chr17,chr17	-,+	LOC220594,LGALS9C	57971,13453
chr17:18365744-18366682	chr17	-	20384372	20385211	False	NM_001190790,NM_001042685	chr17,chr17	+,-	CDRT15L2,LGALS9B	97825,-13524
chr5:155756600-155756881	chr5	+	155756600	155756713	True	NM_001128209,NM_001146726,NM_000337,NM_172244	chr5,chr5,chr5,chr5	+,-,+,+	SGCD,TIMD4,SGCD,SGCD	-2884,633610,-2884,-2884
chrX:48981582-48981860	chrX	+	48981648	48981721	True	NM_001099681,NM_015698	chrX,chrX	+,-	MAGIX,GPKOW	37459,-1569
chr1:169704108-169704601	chr1	+	169704289	169704476	True	NM_000450,NM_018186	chr1,chr1	-,+	SELE,C1orf112	-1069,60073
chrX:119703081-119703337	chrX	+	119703085	119703179	True	NM_014060,NM_003588,NM_001079872	chrX,chrX,chrX	+,-,-	MCTS1,CUL4B,CUL4B	34564,6555,-8268
chr4:580763-581831	chr4	+	580868	581854	True	NM_000283,NM_007100	chr4,chr4	+,-	PDE6B,ATP5I	37508,86323
chr6:86388648-86388922	chr6	+	86388666	86388870	True	NM_002526,NR_003044,NR_002743,NR_003038	chr6,chr6,chr6,chr6	+,-,-,-	NT5E,SNORD50B,SNORD50A,SNHG5	-229415,-1289,-1580,-215
chr17:41321758-41322122	chr17	+	41321906	41322054	True	NM_007300,NM_031858,NM_005899,NM_031862	chr17,chr17,chr17,chr17	-,+,+,+	BRCA1,NBR1,NBR1,NBR1	-44406,456,1191,443
chr17:58212148-58212635	chr17	+	58212152	58212592	True	NM_000717,NR_027408	chr17,chr17	+,-	CA4,LOC653653	14709,-31872
chr20:38731454-38732052	chr20	+	38731498	38732074	True	NM_003286,NM_005461	chr20,chr20	+,-	TOP1,MAFB	925387,585860
chr2:107149654-107151066	chr2	+	107149698	107151034	True	NM_001144013,NR_003506	chr2,chr2	-,+	RGPD3,PLGLA	-64897,-146980
chr12:14848817-14849329	chr12	+	14848887	14849319	True	NM_177925,NM_004963	chr12,chr12	+,-	H2AFJ,GUCY2C	77950,250
chr17:80672651-80673295	chr17	+	80672951	80673200	True	NM_024619,NM_006822	chr17,chr17	+,-	FN3KRP,RAB40B	1381,-16353
chr7:126852148-126852562	chr7	+	126852149	126852454	True	NM_000845,NM_001662	chr7,chr7	-,+	GRM8,ARF5	31178,375951
chr5:63458711-63459589	chr5	+	63458977	63459558	True	NM_000524,NM_178532,NM_001113561	chr5,chr5,chr5	-,+,+	HTR1A,RNF180,RNF180	-201431,2112,2112
chrX:153200887-153201302	chrX	+	153200935	153201183	True	NM_003491,NM_001164741,NM_001666,NM_002910,NM_001146151	chrX,chrX,chrX,chrX,chrX	-,-,-,-,+	NAA10,ARHGAP4,ARHGAP4,RENBP,AVPR2	-467,-9221,-9221,9099,-30457
chr18:5297379-5298523	chr18	+	5297438	5298436	True	NR_026569,NM_003409,NM_001143823,NR_015389	chr18,chr18,chr18,chr18	-,-,-,+	ZFP161,ZFP161,ZFP161,LOC339290	-1738,-1399,-1399,-59390
chr1:26873702-26874338	chr1	+	26873718	26874372	True	NM_001006665,NR_031740,NM_173574	chr1,chr1,chr1	+,+,-	RPS6KA1,MIR1976,ZNF683	-1426,6660,-174452
chr16:89159379-89159826	chr16	+	89159507	89159737	True	NM_001127214,NR_023316,NM_174917,NM_005187	chr16,chr16,chr16,chr16	+,+,+,-	ACSF3,ACSF3,ACSF3,CBFA2T3	516,516,516,-116003
chr21:44872476-44872731	chr21	+	44872516	44872722	True	NR_026960,NM_173354,NR_026863	chr21,chr21,chr21	+,-,-	C21orf125,SIK1,C21orf84	-2663,-25514,25431
chrX:140336315-140336567	chrX	+	140336476	140336548	True	NM_022661,NM_145664	chrX,chrX	-,+	SPANXC,SPANXB2	148,-239769
chr1:66824077-66825385	chr1	+	66824394	66825412	True	NM_005478,NM_001037339	chr1,chr1	-,+	INSL5,PDE4B	441580,-26660
chr1:33790372-33791061	chr1	+	33790457	33790923	True	NR_037400,NM_152493	chr1,chr1	-,+	MIR3605,ZNF362	7220,-68334
chr9:34050849-34051205	chr9	+	34051160	34051220	True	NM_018449,NR_003690	chr9,chr9	-,+	UBAP2,SNORD121B	-2213,-116926
chr15:94574896-94575866	chr15	+	94575000	94575604	True	NM_001159643,NM_020211	chr15,chr15	+,-	MCTP2,RGMA	265825,-942557
chr20:17663453-17663678	chr20	+	17663488	17663724	True	NM_001042576,NM_001159495,NM_004587	chr20,chr20,chr20	-,+,-	RRBP1,BANF2,RRBP1	-560,10595,-560
chr17:65040999-65042700	chr17	+	65041421	65042470	True	NM_014877,NM_000727	chr17,chr17	-,+	HELZ,CACNG1	198899,-820
chr1:46941266-46941881	chr1	+	46941271	46941854	True	NM_147192,NM_001097611	chr1,chr1	+,-	DMBX1,KNCN	30813,75084
chr16:1821931-1822365	chr16	+	1822113	1822385	True	NM_002513,NM_001010865,NM_023936	chr16,chr16,chr16	-,+,-	NME3,EME2,MRPS34	-403,843,805
chr8:16881584-16882810	chr8	+	16881684	16882453	True	NM_181723,NM_019851	chr8,chr8	+,-	EFHA2,FGF20	2293,-22010
chr1:46149645-46151598	chr1	+	46150178	46151598	True	NM_021639,NM_016486	chr1,chr1	-,+	GPBP1L1,TMEM69	754,2248
chr1:86944032-86945490	chr1	+	86944176	86945219	True	NM_001285,NM_020729	chr1,chr1	+,-	CLCA1,ODF2L	-9701,-82151
chr2:74005752-74005993	chr2	+	74005755	74005993	True	NM_001080474,NM_003584	chr2,chr2	+,-	C2orf78,DUSP11	5322,1341
chr1:192125746-192126907	chr1	+	192125756	192126465	True	NM_130782,NM_001199261	chr1,chr1	+,-	RGS18,UCHL5	1126,902114
chr14:100116234-100116536	chr14	+	100116246	100116510	True	NM_032425,NM_001127258,NM_001144995	chr14,chr14,chr14	+,+,-	HHIPL1,HHIPL1,CCDC85C	-4817,-4817,-45519
chr18:61550305-61552264	chr18	+	61550518	61552296	True	NM_002575,NM_001143818,NM_006919	chr18,chr18,chr18	+,+,-	SERPINB2,SERPINB2,SERPINB3	2642,2642,-221321
chr4:158141971-158142772	chr4	+	158142045	158142735	True	NM_001083619,NM_000826,NR_036641,NM_001083620	chr4,chr4,chr4,chr4	+,+,-,+	GRIA2,GRIA2,PDGFC,GRIA2	-361,-361,-249499,-277
chr3:50656413-50656749	chr3	+	50656430	50656681	True	NM_013324,NM_145071,NM_004635	chr3,chr3,chr3	-,-,+	CISH,CISH,MAPKAPK3	-7168,-7168,-1890
chr19:44715110-44716201	chr19	+	44715414	44716035	True	NM_004234,NM_182490	chr19,chr19	-,+	ZNF235,ZNF227	93200,655
chrX:119211081-119211504	chrX	+	119211117	119211535	True	NM_032498,NM_001099685	chrX,chrX	-,-	RHOXF2,RHOXF2B	222,222
chrX:119211081-119211504	chrX	-	119292638	119293056	False	NM_139282,NM_032498,NM_001099685	chrX,chrX,chrX	-,+,+	RHOXF1,RHOXF2,RHOXF2B	-42791,-222,-222
chr1:152324097-152325453	chr1	+	152324240	152325490	True	NM_178438,NM_001014342	chr1,chr1	+,-	LCE5A,FLG2	157829,7042
chr3:143536283-143537239	chr3	+	143536433	143537042	True	NM_173653,NM_173552	chr3,chr3	-,+	SLC9A9,C3orf58	30390,153597
chr12:50788204-50789386	chr12	+	50789161	50789441	True	NR_033200,NM_052879,NM_001145475,NM_199190,NM_001170804,NM_001170803,NM_199188,NM_001170808	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,-,+,+,+,+,+	LARP4,LARP4,FAM186A,LARP4,LARP4,LARP4,LARP4,LARP4	5150,5150,1020,5150,5150,5150,5150,5150
chr7:39649452-39649704	chr7	+	39649506	39649750	True	NM_138701,NR_024390	chr7,chr7	-,+	C7orf11,LOC646999	524551,-471
chr3:42854474-42856124	chr3	+	42854974	42856180	True	NM_001296,NM_001099669,NM_001099668,NM_014056	chr3,chr3,chr3,chr3	+,-,-,-	CCBP2,HIGD1A,HIGD1A,HIGD1A	-4061,-8947,-9040,-8947
chr12:27405205-27406744	chr12	+	27405400	27406732	True	NM_001080406,NM_015000	chr12,chr12	-,+	C12orf71,STK38L	-169945,-8373
chr13:113346109-113346672	chr13	+	113346120	113346590	True	NM_006322,NM_015205,NM_032189	chr13,chr13,chr13	-,+,+	TUBGCP3,ATP11A,ATP11A	-103639,-1529,-1529
chr12:56884827-56885084	chr12	+	56884881	56884982	True	NM_013267,NM_207344	chr12,chr12	-,+	GLS2,SPRYD4	-2700,-22637
chrX:153721952-153722336	chrX	+	153722094	153722256	True	NM_014235,NM_017514,NM_001142392,NM_019848,NM_001142391	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	UBL4A,PLXNA3,SLC10A3,SLC10A3,SLC10A3	-7162,-35522,-3092,-3092,-3092
chr5:124226061-124227569	chr5	+	124226326	124227610	True	NM_004384,NM_020747	chr5,chr5	+,-	CSNK1G3,ZNF608	-1378592,-145521
chr15:67810904-67811673	chr15	+	67810903	67811428	True	NM_001143936,NM_024666	chr15,chr15	+,-	C15orf61,AAGAB	2093,-263829
chr1:193027211-193027716	chr1	+	193027373	193027733	True	NM_001173525,NM_001173524,NM_001199262,NM_001199263,NM_001199261,NM_015984,NR_033393,NM_004600,NM_001042369,NM_001042370	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,-,-,-,+,+,+,+	TROVE2,TROVE2,UCHL5,UCHL5,UCHL5,UCHL5,TROVE2,TROVE2,TROVE2,TROVE2	1270,818,840,840,840,840,818,1270,1270,1270
chr1:155903960-155904252	chr1	+	155904017	155904223	True	NM_014949,NR_003005,NM_181885	chr1,chr1,chr1	-,-,+	KIAA0907,SCARNA4,RXFP4	15,-8140,7256
chr20:29995229-29995671	chr20	+	29995265	29995574	True	NM_001011878,NR_002577,NM_001171832	chr20,chr20,chr20	-,+,-	DEFB121,DEFB122,DEFB121	-1196,13667,5126
chr20:52820650-52821112	chr20	+	52820678	52821146	True	NM_001128915,NM_002623	chr20,chr20	-,+	CYP24A1,PFDN4	-30162,3355
chr4:48273936-48275779	chr4	+	48274096	48275826	True	NM_020846,NM_003215	chr4,chr4	+,-	SLAIN2,TEC	67786,-2282
chr4:18023470-18023702	chr4	+	18023631	18023749	True	NM_153686,NM_001166139,NM_022346	chr4,chr4,chr4	-,-,+	LCORL,LCORL,NCAPG	-148,-148,-211157
chr1:109504201-109505347	chr1	+	109504743	109505214	True	NM_013296,NM_015127,NM_001048210	chr1,chr1,chr1	+,-,-	GPSM2,CLCC1,CLCC1	-85191,952,952
chr11:111742719-111742932	chr11	+	111742718	111742945	True	NM_138378,NM_001077690,NM_001077691,NM_024740,NM_022761,NM_001077692	chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,+,-	FDXACB1,ALG9,ALG9,ALG9,C11orf1,ALG9	7258,-413,-714,-413,7002,-714
chr3:195883842-195885165	chr3	+	195883923	195884801	True	NR_034088,NM_001039617	chr3,chr3	+,-	LOC401109,ZDHHC19	-14473,53549
chr22:20864283-20864595	chr22	+	20864282	20864402	True	NM_001003891,NR_033825,NM_015889	chr22,chr22,chr22	+,-,+	MED15,KLHL22,MED15	-2451,-14112,-2451
chr8:24813060-24813456	chr8	+	24813147	24813413	True	NM_006158,NM_001105541	chr8,chr8	-,+	NEFL,NEFM	768,-40743
chr18:59167259-59169118	chr18	+	59167532	59169122	True	NM_031891,NM_173557	chr18,chr18	+,-	CDH20,RNF152	-9808,391238
chr1:153539056-153540079	chr1	+	153539528	153540107	True	NM_006271,NM_005978	chr1,chr1	+,-	S100A1,S100A2	60765,-1222
chr6:110676859-110677568	chr6	+	110676877	110677233	True	NM_001123364,NM_015891	chr6,chr6	-,+	C6orf186,CDC40	2302,-175312
chr16:33944471-33944928	chr16	+	33944563	33944822	True	NR_027080,NR_002837	chr16,chr16	+,-	LOC283914,UBE2MP1	652964,460001
chr11:19214294-19215199	chr11	+	19214419	19214983	True	NM_001127656,NM_003476,NM_019028	chr11,chr11,chr11	-,-,+	CSRP3,CSRP3,ZDHHC13	8597,8656,-75786
chr5:114961799-114962301	chr5	+	114961802	114962288	True	NM_181836,NM_001284,NM_001164468,NM_001164469	chr5,chr5,chr5,chr5	-,+,-,-	TMED7,AP3S1,TMED7-TICAM2,TMED7-TICAM2	-62,215330,-62,-62
chr13:27335185-27336445	chr13	+	27335275	27336413	True	NM_005288,NM_006646	chr13,chr13	-,+	GPR12,WASF3	-353,-203486
chr1:205292095-205293324	chr1	+	205292245	205293229	True	NM_014858,NM_030952	chr1,chr1	+,-	TMCC2,NUAK2	-95259,-1362
chr5:71416892-71418062	chr5	+	71417034	71417908	True	NM_005909,NM_015084	chr5,chr5	+,-	MAP1B,MRPS27	-13967,198240
chr2:164579623-164580800	chr2	+	164579983	164580826	True	NM_012198,NM_018086	chr2,chr2	+,-	GCA,FIGN	-1379454,11744
chr10:71814538-71814759	chr10	+	71814642	71814787	True	NM_018649,NM_001198696	chr10,chr10	+,-	H2AFY2,AIFM2	-2342,77954
chr8:59464755-59465620	chr8	+	59465005	59465501	True	NM_000780,NM_005625,NM_001007070,NM_001007067,NM_001007068,NM_001007069	chr8,chr8,chr8,chr8,chr8,chr8	-,+,+,+,+,+	CYP7A1,SDCBP,SDCBP,SDCBP,SDCBP,SDCBP	-52285,226,226,226,226,226
chr5:143569030-143569535	chr5	+	143569138	143569578	True	NM_020768,NM_030799	chr5,chr5	+,-	KCTD16,YIPF5	-18757,-18860
chr2:202511844-202513709	chr2	+	202512006	202513470	True	NM_152388,NM_001044385,NM_139158	chr2,chr2,chr2	-,-,+	ALS2CR4,ALS2CR4,CDK15	-4596,-3782,157727
chr1:162335106-162335594	chr1	+	162335179	162335569	True	NM_001126060,NM_182581	chr1,chr1	+,-	NOS1AP,C1orf111	-2457,11125
chr12:122987519-122988922	chr12	+	122988031	122988903	True	NM_014708,NM_017612	chr12,chr12	+,-	KNTC1,ZCCHC8	22905,-2513
chr18:64210891-64212374	chr18	+	64211189	64212147	True	NM_004361,NM_021153	chr18,chr18	+,-	CDH7,CDH19	-793083,59119
chr4:184244250-184244563	chr4	+	184244256	184244546	True	NM_001111319,NM_001185149,NM_017632	chr4,chr4,chr4	-,-,+	CLDN22,CLDN24,CDKN2AIP	-2329,-677,121242
chr12:6692349-6694271	chr12	+	6692370	6694184	True	NR_003012,NM_002046	chr12,chr12	-,+	SCARNA11,GAPDH	-1595,-48765
chr17:41174450-41174760	chr17	+	41174475	41174634	True	NM_006373,NM_005440	chr17,chr17	-,+	VAT1,RND2	-16,2623
chr12:53891649-53893146	chr12	+	53891661	53892397	True	NM_003717,NM_004178,NM_134323,NM_001193511,NM_134324,NM_006301	chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,-,+,-	NPFF,TARBP2,TARBP2,MAP3K12,TARBP2,MAP3K12	9075,2307,2307,1097,2979,1097
chr8:17549786-17550998	chr8	+	17549861	17551015	True	NM_020749,NM_006207	chr8,chr8	-,+	MTUS1,PDGFRL	4281,-115970
chr1:90037259-90038713	chr1	+	90037765	90038588	True	NM_015350,NR_033981	chr1,chr1	+,-	LRRC8B,FLJ27354	-13544,59920
chr11:623797-624149	chr11	+	623933	624155	True	NM_004031,NM_000797,NM_004029,NM_001171968,NM_021924,NM_021920,NM_001572,NM_031264	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,+,-,-,-,-,-,-	IRF7,DRD4,IRF7,CDHR5,CDHR5,SCT,IRF7,CDHR5	-8205,13149,-7934,962,962,3068,-7934,962
chr15:23929481-23931009	chr15	+	23929576	23930964	True	NM_005664,NM_002487	chr15,chr15	+,-	MKRN3,NDN	-119175,1536
chr11:62622300-62623368	chr11	+	62622607	62623354	True	NR_003098,NR_002559,NR_002561,NR_002563,NR_002562,NM_001012662,NR_002560,NM_001012664,NR_002565,NR_002564,NM_002394,NR_000008	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,-,+,-,+,-,-,+,-	SNHG1,SNORD29,SNORD30,SNORD27,SNORD28,SLC3A2,SNORD31,SLC3A2,SNORD25,SNORD26,SLC3A2,SNORD22	59,-1167,-1403,-52,-440,129,-1742,129,-120,-33,129,-2100
chr13:22203183-22203414	chr13	+	22203182	22203448	True	NM_152726,NM_002010	chr13,chr13	-,+	EFHA1,FGF9	-24827,41766
chr1:33285905-33286760	chr1	+	33286098	33286684	True	NM_003680,NM_001017406,NM_022753	chr1,chr1,chr1	-,+,+	YARS,S100PBP,S100PBP	-2465,-2983,-2983
chr17:40912386-40912992	chr17	+	40912405	40912761	True	NR_024462,NR_024461,NM_005854	chr17,chr17,chr17	-,-,+	LOC100190938,LOC100190938,RAMP2	564,564,450
chr6:31868722-31869001	chr6_qbl_hap6	+	3162536	3162822	False	NM_025256,NM_001178063,NM_181842,NM_006709	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	-,+,-,-	EHMT2,C2,ZBTB12,EHMT2	-3281,-19,791,-3281
chr6:31868722-31869001	chr6_mcf_hap5	+	3248627	3248913	False	NM_025256,NM_001178063,NM_181842,NM_006709	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	-,+,-,-	EHMT2,C2,ZBTB12,EHMT2	-3283,-19,789,-3283
chr6:31868722-31869001	chr6_cox_hap2	+	3378498	3378784	False	NM_025256,NM_001178063,NM_181842,NM_006709	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	-,+,-,-	EHMT2,C2,ZBTB12,EHMT2	-3280,-19,789,-3280
chr6:31868722-31869001	chr6	+	31868744	31869030	True	NM_025256,NM_001178063,NM_181842,NM_006709	chr6,chr6,chr6,chr6	-,+,-,-	EHMT2,C2,ZBTB12,EHMT2	-3280,-19,789,-3280
chr6:31868722-31869001	chr6_dbb_hap3	+	3154326	3154612	False	NM_025256,NM_001178063,NM_181842,NM_006709	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	-,+,-,-	EHMT2,C2,ZBTB12,EHMT2	-3280,-19,789,-3280
chr7:93627865-93629828	chr7	+	93628193	93629802	True	NM_004126,NM_005868	chr7,chr7	+,-	GNG11,BET1	-77228,3940
chr8:86377421-86377885	chr8	+	86377611	86377890	True	NM_001738,NM_000067	chr8,chr8	-,+	CA1,CA2	-87269,-1533
chr5:82769028-82770152	chr5	+	82769107	82769992	True	NM_001126336,NM_004385,NM_001164097,NM_001884,NM_001164098	chr5,chr5,chr5,chr5,chr5	+,+,+,-,+	VCAN,VCAN,VCAN,HAPLN1,VCAN	-1665,-1665,-1665,246957,-1665
chr19:51919877-51920147	chr19	+	51920010	51920156	True	NM_033130,NM_001171156,NM_001171157,NR_033235,NM_001171161,NM_001171160,NM_001171158,NM_001171159	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,+,-,-,-,-	SIGLEC10,SIGLEC10,SIGLEC10,LOC100129083,SIGLEC10,SIGLEC10,SIGLEC10,SIGLEC10	951,951,951,-901,951,951,951,951
chr12:13246028-13246358	chr12	+	13246173	13246327	True	NM_153823,NM_031289,NM_020853	chr12,chr12,chr12	-,-,+	GSG1,GSG1,KIAA1467	2432,2432,-48919
chr7:139171326-139171603	chr7	+	139171367	139171651	True	NM_198508,NM_001080511	chr7,chr7	-,+	KLRG2,CLEC2L	-2910,37022
chr19:41102262-41102926	chr19	+	41102264	41102885	True	NM_001042544,NM_003573,NM_004756,NM_001042545	chr19,chr19,chr19,chr19	+,+,-,+	LTBP4,LTBP4,NUMBL,LTBP4	255,-3243,93721,4391
chr21:38579147-38580127	chr21	+	38579224	38580066	True	NM_006052,NR_026719	chr21,chr21	-,+	DSCR3,DSCR9	59817,888
chr3:42630683-42631019	chr3	+	42630777	42631017	True	NM_016305,NM_004206,NM_032970,NM_001201584	chr3,chr3,chr3,chr3	+,-,-,-	SS18L2,SEC22C,SEC22C,SEC22C	1280,-7257,-7257,-7257
chr12:64062730-64062938	chr12	+	64062741	64062891	True	NM_014254,NM_173812	chr12,chr12	+,-	TMEM5,DPY19L2	110745,-387
chr6:43737017-43737346	chr6	+	43737021	43737285	True	NM_018135,NM_001025369,NM_001025368,NM_001025367,NM_001025366,NM_001033756,NM_001025370,NM_003376,NM_001171624,NM_001171625,NM_001171626,NM_001171627,NM_001171622,NM_001171623,NM_001204384,NM_001204385,NM_001171628,NM_001171629,NM_001171630	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+	MRPS18A,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA	-81472,660,660,660,660,660,660,660,660,660,660,660,660,660,660,660,660,660,660
chr10:91460922-91461148	chr10	+	91461053	91461161	True	NR_026835,NM_016195	chr10,chr10	-,+	FLJ37201,KIF20B	-3368,205
chr15:84115967-84116170	chr15	+	84115967	84116079	True	NM_003027,NM_001717,NR_026799	chr15,chr15,chr15	+,-,+	SH3GL3,BNC1,SH3GL3	11,-162499,11
chr3:172244978-172245736	chr3	+	172245049	172245691	True	NM_018098,NR_033994,NM_003810,NM_001190942,NM_001190943	chr3,chr3,chr3,chr3,chr3	+,-,-,-,-	ECT2,TNFSF10,TNFSF10,TNFSF10,TNFSF10	226606,-3752,-3752,-3752,-3784
chr1:44411342-44411671	chr1	+	44411344	44411591	True	NM_014652,NM_006934	chr1,chr1	+,-	IPO13,SLC6A9	886,71463
chr13:98799505-98800554	chr13	+	98799515	98800339	True	NM_178861,NM_001001715,NM_005766	chr13,chr13,chr13	-,+,+	RNF113B,FARP1,FARP1	29238,-4139,-4139
chr10:99095585-99097279	chr10	+	99095965	99097209	True	NM_005479,NM_012083	chr10,chr10	+,-	FRAT1,FRAT2	-17000,-1507
chr12:110172283-110172596	chr12	+	110172311	110172618	True	NM_032829,NR_026661	chr12,chr12	+,-	C12orf34,MGC14436	-20175,38721
chr4:186393167-186394002	chr4	+	186393246	186393528	True	NM_152775,NM_001114357,NM_001145411	chr4,chr4,chr4	-,+,-	CCDC110,C4orf47,CCDC110	-333,-42752,-333
chr9:72669277-72670554	chr9	+	72669366	72670525	True	NM_153267,NM_001099666	chr9,chr9	+,-	MAMDC2,PTAR1	-10922,-294490
chr7:29605024-29605510	chr7	+	29605072	29605462	True	NR_024278,NM_175887	chr7,chr7	-,+	LOC646762,PRR15	119342,-1702
chr13:51707807-51709016	chr13	+	51707889	51708997	True	NR_003923,NM_145019	chr13,chr13	-,+	GUCY1B2,FAM124A	-67596,87509
chrX:12822350-12823843	chrX	+	12822608	12823866	True	NM_002765,NR_030727	chrX,chrX	+,-	PRPS2,LOC349408	-13186,137603
chrX:30907913-30908540	chrX	+	30907917	30908344	True	NM_203391,NM_152787	chrX,chrX	+,-	GK,TAB3	-236493,-406
chr14:22003334-22005057	chr14	+	22003526	22005028	True	NM_005407,NM_014828	chr14,chr14	-,+	SALL2,TOX4	359,-58242
chr9:21979072-21980849	chr9	+	21979300	21980682	True	NR_024274,NM_001195132,NM_000077,NM_058197	chr9,chr9,chr9,chr9	+,-,-,-	C9orf53,CDKN2A,CDKN2A,CDKN2A	-12214,-4168,-4168,-4474
chr9:104160432-104160655	chr9	+	104160470	104160672	True	NM_197977,NM_003452,NM_019051	chr9,chr9,chr9	+,+,-	ZNF189,ZNF189,MRPL50	490,490,297
chr22:51018325-51019200	chr22	+	51018427	51019121	True	NM_001145137,NM_001145136,NM_001145135,NM_001145134,NR_021492,NM_005198,NM_152245,NR_027928,NM_004377,NM_152246	chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,+,-,-,-,-,-	CPT1B,CPT1B,CPT1B,CPT1B,LOC100144603,CHKB,CPT1B,CHKB-CPT1B,CPT1B,CPT1B	-1921,-1331,-1331,-1331,2333,2357,-1331,2357,-1533,-1533
chr17:16890862-16891737	chr17	+	16890873	16891439	True	NM_015134,NM_012452	chr17,chr17	+,-	MPRIP,TNFRSF13B	54667,-15471
chr18:10625313-10625664	chr18	+	10625381	10625607	True	NM_003826,NM_022068	chr18,chr18	+,-	NAPG,FAM38B	-99559,523204
chr12:4225352-4225794	chr12	+	4225356	4225720	True	NM_001759,NM_020367	chr12,chr12	+,-	CCND2,PARP11	157181,-242748
chr7:30068454-30069412	chr7	+	30068655	30069439	True	NM_017946,NM_032639,NM_001197026,NM_001197027	chr7,chr7,chr7,chr7	-,+,+,+	FKBP14,PLEKHA8,PLEKHA8,PLEKHA8	-2387,-729,-729,-729
chr20:62691758-62692233	chr20	+	62691924	62692137	True	NM_198723,NM_018419,NM_003195	chr20,chr20,chr20	+,-,+	TCEA2,SOX18,TCEA2	-3536,-10945,1872
chr17:36881784-36883315	chr17	+	36881795	36883263	True	NM_007144,NM_001136498	chr17,chr17	-,+	PCGF2,CISD3	21345,3246
chr10:43286153-43286871	chr10	+	43286326	43286830	True	NM_014753,NM_006955	chr10,chr10	+,-	BMS1,ZNF33B	-8425,-152334
chr20:33544780-33545451	chr20	+	33544865	33545265	True	NM_000178,NM_020884	chr20,chr20	-,+	GSS,MYH7B	-1264,-1212
chr1:3529534-3529786	chr1	+	3529556	3529752	True	NM_001409,NM_182752	chr1,chr1	-,+	MEGF6,TPRG1L	-1497,11803
chr10:83635278-83635520	chr10	+	83635283	83635413	True	NM_001165973,NM_001165972,NM_138812,NM_001010848	chr10,chr10,chr10,chr10	+,+,-,+	NRG3,NRG3,DYDC1,NRG3	2029,-264,-1518783,-264
chr21:30391031-30391333	chr21	+	30391168	30391330	True	NM_016940,NM_001001992,NM_001032410,NM_006447	chr21,chr21,chr21,chr21	-,+,+,+	RWDD2B,USP16,USP16,USP16	405,5607,5607,5607
chr8:125741055-125741637	chr8	+	125741167	125741666	True	NM_005005,NM_014751	chr8,chr8	+,-	NDUFB9,MTSS1	-189882,-437
chr17:79997702-79998468	chr17	+	79997745	79998465	True	NM_016286,NM_005052,NM_001195218	chr17,chr17,chr17	-,+,-	DCXR,RAC3,DCXR	-2172,-8264,-2172
chr1:43644792-43646783	chr1	+	43644991	43646519	True	NM_001159936,NM_001167965,NM_001167966,NR_030778,NM_152498,NM_006824	chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,+,+,-	EBNA1BP2,WDR65,WDR65,WDR65,WDR65,EBNA1BP2	-6750,-7041,-7027,-7041,-7041,-7005
chr6:112028659-112028985	chr6	+	112028658	112028981	True	NR_034109,NM_153047	chr6,chr6	+,-	LOC643749,FYN	-224042,12343
chr19:55887663-55887908	chr19	+	55887801	55887889	True	NM_139172,NM_000991,NM_000641,NM_001190764,NM_001136135,NM_001136134,NM_001136137,NM_001136136	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,-,-,+,+,+,+	TMEM190,RPL28,IL11,LOC388564,RPL28,RPL28,RPL28,RPL28	314,9410,-5987,7788,9410,9410,9410,9410
chr20:45989018-45989716	chr20	+	45989106	45989702	True	NM_183048,NR_024594,NM_012408,NM_183047	chr20,chr20,chr20,chr20	-,+,-,-	ZMYND8,LOC100131496,ZMYND8,ZMYND8	-3632,-41911,-3632,-3632
chr13:114100785-114102183	chr13	+	114100806	114101936	True	NM_017905,NM_138430,NM_199162	chr13,chr13,chr13	+,-,-	TMCO3,ADPRHL1,ADPRHL1	43371,5953,1571
chr1:78444571-78445079	chr1	+	78444675	78445119	True	NM_007034,NM_003902	chr1,chr1	+,-	DNAJB4,FUBP1	25516,24
chr20:44521770-44523740	chr20	+	44521878	44523751	True	NM_000308,NM_080749,NM_001167594,NM_080608,NM_001127695	chr20,chr20,chr20,chr20,chr20	+,-,+,-,+	CTSA,NEURL2,CTSA,C20orf165,CTSA	-2338,-1977,-2338,-5640,-2338
chr18:20739222-20740160	chr18	+	20739350	20739924	True	NM_138375,NM_032933	chr18,chr18	+,-	CABLES1,C18orf45	-3612,278052
chr11:57333610-57334395	chr11	+	57333655	57334412	True	NM_004223,NM_001105565,NM_198183	chr11,chr11,chr11	-,+,-	UBE2L6,SMTNL1,UBE2L6	825,-23598,1098
chr15:99056329-99056819	chr15	+	99056676	99056808	True	NM_182562,NM_000875	chr15,chr15	-,+	FAM169B,IGF1R	853,135952
chr3:167166603-167168202	chr3	+	167166817	167168192	True	NM_006217,NM_001122752	chr3,chr3	-,+	SERPINI2,SERPINI1	23684,285239
chr16:30345295-30345679	chr16	+	30345295	30345701	True	NR_002453,NM_013292	chr16,chr16	-,+	LOC595101,MYLPF	1044,40421
chr16:30345295-30345679	chr16	+	29605315	29605613	False	NR_002593,NM_001030288	chr16,chr16	-,+	SLC7A5P1,SPN	19475,68686
chr16:30345295-30345679	chr16	+	18936576	18936678	False	NM_015092,NM_024847	chr16,chr16	-,+	SMG1,TMC7	1098,58577
chr16:30345295-30345679	chr16	-	22449382	22449678	False	NR_027154,NR_027460	chr16,chr16	+,-	LOC641298,RRN3P3	-1104,-346
chr16:30345295-30345679	chr16	+	21512204	21512500	False	NM_001077180,NR_027155	chr16,chr16	+,-	METTL9,LOC100271836	98355,1152
chr15:40656226-40656714	chr15	+	40656233	40656417	True	NM_207380,NM_033510	chr15,chr15	-,+	C15orf52,DISP2	-23065,-5850
chr1:11359313-11359677	chr1	+	11359336	11359671	True	NM_004958,NM_013319	chr1,chr1	-,+	MTOR,UBIAD1	-36728,-26132
chr19:54675676-54675880	chr19	+	54675681	54675857	True	NM_001145303,NM_144686,NM_024075	chr19,chr19,chr19	-,-,+	TMC4,TMC4,TSEN34	1137,1137,18261
chr1:21045179-21045930	chr1	+	21045269	21045912	True	NM_020816,NM_001122819,NM_032409	chr1,chr1,chr1	-,-,+	KIF17,KIF17,PINK1	-952,-952,-85372
chr6:3849636-3850269	chr6	+	3849664	3850230	True	NM_183373,NM_012135	chr6,chr6	-,+	C6orf145,FAM50B	-97418,-83
chr14:106939210-106939569	chr14	+	106939218	106939610	True	NR_002224	chr14	-	ADAM6	-500860
chr14:106939210-106939569	chr14	+	106858444	106858579	False	NR_002224,NR_027457	chr14,chr14	-,+	ADAM6,NCRNA00221	-420086,79875
chr3:183892913-183893351	chr3	+	183892950	183893156	True	NM_005787,NM_001025205,NM_004068	chr3,chr3,chr3	-,+,+	ALG3,AP2M1,AP2M1	73653,-367,-367
chr16:16025601-16026021	chr16	+	16025852	16026020	True	NM_144600,NM_004996	chr16,chr16	-,+	FOPNL,ABCC1	-43405,17413
chr2:176981382-176982039	chr2	+	176981439	176982065	True	NM_002148,NM_014213,NM_001080458,NM_021192	chr2,chr2,chr2,chr2	+,+,-,+	HOXD10,HOXD9,EVX2,HOXD11	2,5347,-32749,-9406
chr20:60638462-60638861	chr20	+	60638522	60638896	True	NM_144703,NM_003185	chr20,chr20	+,-	LSM14B,TAF4	58620,2020
chr15:81490335-81491283	chr15	+	81490372	81490994	True	NM_001172128,NM_181900	chr15,chr15	+,-	IL16,STARD5	-1211,125580
chr16:2007102-2007342	chr16	+	2007289	2007349	True	NR_003142,NM_174903,NM_005061,NM_002952,NR_002327,NR_002326,NR_003020,NM_004548	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,-,-,-,-,+,+	SNHG9,RNF151,RPL3L,RPS2,SNORA10,SNORA64,SNORA78,NDUFB10	7647,9525,-2610,7528,5168,5808,7835,2167
chr14:104031075-104031856	chr14	+	104031241	104031831	True	NM_032374,NM_001015049,NM_001015048,NM_004873	chr14,chr14,chr14,chr14	+,-,-,-	C14orf153,BAG5,BAG5,BAG5	-1993,-2586,-2090,-2586
chr2:86254533-86255080	chr2	+	86254664	86255128	True	NM_017952,NR_026984	chr2,chr2	+,-	PTCD3,LOC90784	78176,-3673
chr1:15256121-15256708	chr1	+	15256159	15256739	True	NM_001018000,NM_001018001,NR_027136	chr1,chr1,chr1	+,+,-	KAZN,KAZN,C1orf126	-5585,10,222271
chr1:156890803-156891607	chr1	+	156890819	156891635	True	NM_144702,NR_030527	chr1,chr1	+,-	LRRC71,MIR765	-447,14451
chr3:44809309-44810105	chr3	+	44809402	44810109	True	NM_020242,NM_020696	chr3,chr3	+,-	KIF15,KIAA1143	-6244,-6229
chr14:50050357-50050740	chr14	+	50050483	50050689	True	NM_001030001,NR_037792,NM_001032	chr14,chr14,chr14	-,+,-	RPS29,LRR1,RPS29	2463,14725,2463
chr1:91482683-91483386	chr1	+	91482732	91483246	True	NM_016620,NM_001134419,NM_201269,NM_032186	chr1,chr1,chr1,chr1	-,+,-,-	ZNF644,CDC7,ZNF644,ZNF644	3834,483157,4475,4475
chrX:131546292-131547735	chrX	+	131546425	131547682	True	NM_001042452,NM_001170701,NM_001170702,NM_001170703	chrX,chrX,chrX,chrX	+,-,-,-	MST4,MBNL3,MBNL3,MBNL3	-388841,-28,-28,5
chr4:169220033-169221545	chr4	+	169220341	169221296	True	NM_017631,NM_001166108	chr4,chr4	-,+	DDX60,PALLD	18719,196920
chr2:85105503-85106597	chr2	+	85105686	85106210	True	NM_021103,NM_001080824	chr2,chr2	+,-	TMSB10,C2orf89	26552,2092
chr13:21515945-21517266	chr13	+	21516251	21517163	True	NM_022459,NM_005870	chr13,chr13	-,+	XPO4,SAP18	-39338,197489
chr6:89857991-89859893	chr6	+	89858240	89859873	True	NM_001010853,NM_080743	chr6,chr6	+,-	PM20D2,SRSF12	-2529,-30440
chr7:26681209-26683077	chr7	+	26681665	26683103	True	NR_022006,NM_001145531	chr7,chr7	-,+	KIAA0087,C7orf71	-103221,-4226
chr21:39627349-39628677	chr21	+	39627348	39628700	True	NM_002243,NM_005867,NM_170736	chr21,chr21,chr21	+,-,+	KCNJ15,DSCR4,KCNJ15	-37,-133894,169
chr11:113748915-113749559	chr11	+	113749121	113749571	True	NM_006028,NM_020886	chr11,chr11	+,-	HTR3B,USP28	26017,-2865
chr2:97203680-97204055	chr2	+	97203699	97203989	True	NM_212481,NR_026875	chr2,chr2	+,-	ARID5A,NEURL3	-1286,-29853
chr2:64750541-64750855	chr2	+	64750576	64750903	True	NM_014755,NM_001002243,NM_017657,NM_203437	chr2,chr2,chr2,chr2	-,+,+,+	SERTAD2,AFTPH,AFTPH,AFTPH	130194,535,535,535
chr20:32265211-32265552	chr20	+	32265300	32265593	True	NM_001024675,NM_031231,NM_031232,NM_005225	chr20,chr20,chr20,chr20	+,-,-,-	C20orf134,NECAB3,NECAB3,E2F1	-11047,-3036,-3036,8668
chr10:43933201-43933792	chr10	+	43933217	43933606	True	NR_026693,NM_001098204	chr10,chr10	+,-	ZNF487P,HNRNPF	-703,-28521
chr22:22084363-22086274	chr22	+	22084463	22086159	True	NM_013313,NM_148176	chr22,chr22	-,+	YPEL1,PPIL2	3962,-64248
chr19:21512781-21513353	chr19	+	21512802	21512926	True	NR_027130,NM_021269	chr19,chr19	+,-	ZNF738,ZNF708	28808,-590
chr14:94776151-94776769	chr14	+	94776210	94776623	True	NM_058237,NM_001756	chr14,chr14	+,-	PPP4R4,SERPINA6	-135612,13115
chr9:91605055-91605346	chr9	+	91605094	91605390	True	NM_001001938,NM_016848,NM_001142413,NM_005226	chr9,chr9,chr9,chr9	+,-,+,+	C9orf47,SHC3,C9orf47,S1PR3	387,188342,387,971
chr8:30239807-30240642	chr8	+	30239812	30240662	True	NM_001100916,NM_006867,NM_001008712,NM_001008711,NM_001008710	chr8,chr8,chr8,chr8,chr8	-,+,+,+,+	MBOAT4,RBPMS,RBPMS,RBPMS,RBPMS	-237612,1281,1281,1281,1281
chr5:119800886-119801093	chr5	+	119800958	119801088	True	NM_173666,NM_016644	chr5,chr5	-,+	DTWD2,PRR16	-1476718,-990
chr17:4607676-4607916	chr17	+	4607675	4607755	True	NM_004313,NM_199004,NM_014389	chr17,chr17,chr17	+,+,-	ARRB2,ARRB2,PELP1	6033,6033,-43
chr1:26797072-26797907	chr1	+	26797126	26797848	True	NM_005517,NM_173574	chr1,chr1	+,-	HMGN2,ZNF683	1053,-97860
chr14:21905371-21905586	chr14	+	21905458	21905609	True	NM_020920,NM_014828,NM_001170629	chr14,chr14,chr14	-,+,-	CHD8,TOX4,CHD8	-1,39725,-5591
chr5:68486639-68487059	chr5	+	68486803	68487063	True	NM_176816,NM_022909	chr5,chr5	-,+	CCDC125,CENPH	129397,-1487
chr19:17579890-17580117	chr19	+	17579976	17580086	True	NM_198580,NM_138454	chr19,chr19	+,-	SLC27A1,NXNL1	1213,-8251
chr21:45762753-45763505	chr21	+	45762756	45763302	True	NM_003307,NM_004928	chr21,chr21	+,-	TRPM2,C21orf2	10181,-3471
chr14:54955958-54956432	chr14	+	54955977	54956163	True	NM_004124,NM_006568	chr14,chr14	-,+	GMFB,CGRRF1	-233,20423
chr11:93864298-93865113	chr11	+	93864430	93864975	True	NM_015368,NM_016540	chr11,chr11	+,-	PANX1,GPR83	-2387,269661
chr1:13676560-13677758	chr1	+	13676620	13677664	True	NM_001099854,NM_001010890	chr1,chr1	-,+	PRAMEF14,PRAMEF9	-3109,-34710
chr1:13676560-13677758	chr1	+	13455784	13456828	False	NM_001099854,NM_001024661,NM_001010890	chr1,chr1,chr1	-,-,+	PRAMEF14,PRAMEF13,PRAMEF9	-3128,-3128,-34671
chr9:104142030-104143581	chr9	+	104142305	104143532	True	NM_001127610,NM_001701,NM_003452	chr9,chr9,chr9	-,-,+	BAAT,BAAT,ZNF189	2326,3812,17630
chr7:75038746-75039108	chr7	+	75038801	75038984	True	NR_003614,NR_033322	chr7,chr7	-,+	PMS2L2,NSUN5P1	-50586,639
chr7:75038746-75039108	chr7	-	72425914	72426097	False	NR_033323,NR_003602	chr7,chr7	-,+	NSUN5P2,LOC541473	-612,14094
chr2:55494451-55494763	chr2	+	55494656	55494764	True	NM_001005369,NR_027258,NM_002453	chr2,chr2,chr2	-,+,-	MTIF2,PRORSD1P,MTIF2	1601,14690,1670
chr7:64257136-64258476	chr7	+	64257460	64258057	True	NR_027661,NM_006524,NM_001160183,NR_027660,NR_002789	chr7,chr7,chr7,chr7,chr7	+,+,+,+,-	ZNF138,ZNF138,ZNF138,ZNF138,LOC168474	-2752,-2752,-2752,-2752,56171
chr17:49330600-49332564	chr17	+	49330946	49332327	True	NM_017643,NM_016001	chr17,chr17	-,+	MBTD1,UTP18	5151,5569
chr10:70661322-70662397	chr10	+	70661531	70662218	True	NM_024045,NM_152707	chr10,chr10	+,-	DDX50,SLC25A16	-548,-374251
chr5:53674802-53676750	chr5	+	53674964	53676440	True	NM_006308,NM_019087	chr5,chr5	+,-	HSPB3,ARL15	74990,-68561
chr10:89116824-89117288	chr10	+	89116897	89117249	True	NM_001009610,NR_024397	chr10,chr10	+,-	FAM22D,LOC728190	227,-14582
chr10:89116824-89117288	chr10	+	88984677	88985029	False	NM_001099338,NR_024397	chr10,chr10	+,-	FAM22A,LOC728190	175,117338
chr10:89116824-89117288	chr10	+	81600886	81600938	False	NR_029407,NM_003019	chr10,chr10	+,-	LOC642361,SFTPD	-15281,107975
chr10:89116824-89117288	chr10	+	81462455	81462807	False	NR_027512,NM_001098668	chr10,chr10	+,-	LOC650623,SFTPA2	-19775,-142292
chr16:76309626-76310972	chr16	+	76309827	76310996	True	NM_005548,NM_033401	chr16,chr16	-,+	KARS,CNTNAP4	-628242,179
chr17:56355621-56356437	chr17	+	56355655	56356439	True	NR_027647,NM_000250	chr17,chr17	+,-	LPO,MPO	-39919,1907
chr2:74701369-74701782	chr2	+	74701507	74701635	True	NM_001146158,NM_053050,NR_027749,NM_006302,NM_032779,NM_022492	chr2,chr2,chr2,chr2,chr2,chr2	-,-,+,-,-,+	MOGS,MRPL53,TTC31,MOGS,CCDC142,TTC31	-8970,-1565,8564,-8970,8774,8564
chr10:85897096-85898501	chr10	+	85897096	85898071	True	NM_001017924,NM_014394	chr10,chr10	-,+	LRIT2,GHITM	87272,1113
chr3:89154566-89156090	chr3	+	89154712	89156099	True	NM_182644,NM_001195308,NM_005233	chr3,chr3,chr3	+,-,+	EPHA3,CGGBP1,EPHA3	574,-955696,574
chr19:33074896-33075906	chr19	+	33075087	33075937	True	NM_004708,NM_032139	chr19,chr19	+,-	PDCD5,ANKRD27	-3044,90215
chr20:52195303-52196504	chr20	+	52195329	52196521	True	NM_006526,NM_001193421	chr20,chr20	-,+	ZNF217,TSHZ2	3165,-393560
chr12:4553073-4553280	chr12	+	4553085	4553329	True	NM_020996,NM_001130862	chr12,chr12	-,+	FGF6,RAD51AP1	1501,94620
chr11:65151083-65151848	chr11	+	65151354	65151674	True	NM_031904,NM_182556,NM_001077241	chr11,chr11,chr11	+,-,-	FRMD8,SLC25A45,SLC25A45	2366,-1212,-1212
chr1:1474802-1475041	chr1	+	1474836	1475076	True	NM_001170536,NM_001114748	chr1,chr1	+,-	ATAD3A,C1orf70	-26977,714
chr17:7154693-7155156	chr17	+	7155079	7155139	True	NM_015343,NM_007278,NM_203415,NM_203414,NM_203413,NM_015362,NM_001143775	chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,+,+,+,-	CTDNEP1,GABARAP,C17orf81,C17orf81,C17orf81,C17orf81,CTDNEP1	170,-9326,232,411,411,411,-84
chr7:98467113-98467317	chr7	+	98467252	98467348	True	NM_001134450,NM_001134451,NM_152913,NM_003496	chr7,chr7,chr7,chr7	-,-,-,+	TMEM130,TMEM130,TMEM130,TRRAP	375,375,375,8764
chr9:115513663-115513864	chr9	+	115513784	115513860	True	NM_001012994,NM_021218	chr9,chr9	+,-	SNX30,C9orf80	-701,-33397
chr7:50772591-50774200	chr7	+	50772684	50774236	True	NR_033845,NM_001001550	chr7,chr7	+,-	LOC100129427,GRB10	-173278,154
chr20:4795615-4796602	chr20	+	4795747	4796385	True	NM_012409,NM_170774,NM_014737	chr20,chr20,chr20	+,-,-	PRND,RASSF2,RASSF2	-93242,22,7956
chr1:202931783-202932826	chr1	+	202931787	202932747	True	NM_016243,NM_001127687,NM_015999,NM_138391	chr1,chr1,chr1,chr1	-,-,-,+	CYB5R1,ADIPOR1,ADIPOR1,TMEM183A	3707,-4087,-4302,43786
chr2:43996176-43996874	chr2	+	43996329	43996783	True	NM_015522,NM_022436,NM_001193464,NM_016008	chr2,chr2,chr2,chr2	+,-,+,+	DYNC2LI1,ABCG5,DYNC2LI1,DYNC2LI1	4394,69225,4394,4394
chr10:112696013-112696484	chr10	+	112696158	112696505	True	NR_026715,NM_007373	chr10,chr10	-,+	RPL13AP6,SHOC2	558,-16918
chr16:24857020-24857632	chr16	+	24857081	24857655	True	NM_001006634,NM_052944	chr16,chr16	-,+	ARHGAP17,SLC5A11	169070,-62
chr14:85997557-85997909	chr14	+	85997567	85997941	True	NM_013231,NM_000153	chr14,chr14	+,-	FLRT2,GALC	-1130,2461724
chr5:39428851-39429526	chr5	+	39428927	39429556	True	NM_001343,NM_003999	chr5,chr5	-,+	DAB2,OSMR	-3592,-582891
chr2:241081985-241082512	chr2	+	241082024	241082345	True	NM_001163424,NM_148961,NM_138336,NM_002081	chr2,chr2,chr2,chr2	-,-,-,+	MYEOV2,OTOS,MYEOV2,GPC1	-6277,-1951,-6260,292769
chr10:72242287-72243415	chr10	+	72242292	72243210	True	NM_018055,NM_014431	chr10,chr10	-,+	NODAL,KIAA1274	-40827,-3779
chr5:115911098-115912114	chr5	+	115911183	115911824	True	NM_020796,NM_016144	chr5,chr5	-,+	SEMA6A,COMMD10	-632,-490513
chr2:96991672-96991934	chr2	+	96991689	96991929	True	NM_015341,NM_001163523,NM_001163524,NM_178495,NM_001008949,NM_014014	chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,+,-	NCAPH,ITPRIPL1,ITPRIPL1,ITPRIPL1,ITPRIPL1,SNRNP200	9554,-671,15,5,-678,-20382
chr18:43407174-43408634	chr18	+	43407358	43408538	True	NM_213602,NM_020964	chr18,chr18	+,-	SIGLEC15,EPG5	-1864,138817
chr7:6590161-6590569	chr7	+	6590466	6590580	True	NM_001134387,NM_001145118	chr7,chr7	+,-	ZDHHC4,GRID2IP	26484,537
chr15:55482417-55484061	chr15	+	55482483	55484078	True	NM_004855,NM_016304	chr15,chr15	+,-	PIGB,RSL24D1	127054,5203
chr3:28390793-28391068	chr3	+	28390810	28391035	True	NM_022461,NM_001040432,NM_001134432,NM_001134433	chr3,chr3,chr3,chr3	-,+,-,-	AZI2,ZCWPW2,AZI2,AZI2	-192,40951,-192,-192
chr20:34700374-34701082	chr20	+	34700444	34701074	True	NM_177996,NR_027451	chr20,chr20	+,-	EPB41L1,LOC647979	-147,-61562
chr2:112659553-112661289	chr2	+	112659803	112661177	True	NM_022662,NM_006343	chr2,chr2	-,+	ANAPC1,MERTK	-18062,-3664
chr7:106685688-106685940	chr7	+	106685820	106685924	True	NM_002736,NM_175884	chr7,chr7	+,-	PRKAR2B,FLJ36031	-693,-384186
chr3:12804278-12804513	chr3	+	12804281	12804393	True	NM_001162499,NM_018306	chr3,chr3	+,-	CAND2,TMEM40	33777,-3473
chr12:124085983-124086191	chr12	+	124086087	124086229	True	NM_001414,NM_020936	chr12,chr12	-,+	EIF2B1,DDX55	32144,442
chr3:13113885-13114194	chr3	+	13113992	13114222	True	NM_012298,NM_001134382	chr3,chr3	+,-	CAND2,IQSEC1	-275872,445
chr14:58060520-58061542	chr14	+	58060544	58061566	True	NM_001080455,NM_001011713	chr14,chr14	-,+	SLC35F4,NAA30	2103,-203324
chr19:54584163-54585048	chr19	+	54584352	54584932	True	NM_004542,NM_001135686	chr19,chr19	+,-	NDUFA3,TARM1	21227,100
chr7:5938667-5939054	chr7	+	5938689	5939097	True	NM_001099697,NM_015622	chr7,chr7	-,+	RSPH10B2,CCZ1	71268,-399
chr7:5938667-5939054	chr7	-	6865189	6865569	False	NM_198097,NM_173565	chr7,chr7	-,+	C7orf28B,RSPH10B	407,-71501
chr4:8271813-8272035	chr4	+	8271889	8272009	True	NM_053044,NM_001130088	chr4,chr4	+,-	HTRA3,ABLIM2	-451,-111330
chr12:51567051-51567255	chr12	+	51567051	51567291	True	NM_005653,NM_001136264,NM_001173453,NM_001173452	chr12,chr12,chr12,chr12	-,+,-,-	TFCP2,DAZAP2,TFCP2,TFCP2	-125,65216,-125,-125
chr18:30041826-30043578	chr18	+	30041878	30043487	True	NR_003558,NM_022751	chr18,chr18	+,-	WBP11P1,FAM59A	48138,7018
chr20:60960961-60961266	chr20	+	60961163	60961315	True	NM_001024,NM_005560	chr20,chr20	+,-	RPS21,LAMA5	805,-18795
chr12:10157536-10159508	chr12	+	10157914	10159326	True	NM_016509,NM_001099431,NM_001129998,NM_205852	chr12,chr12,chr12,chr12	-,-,+,+	CLEC1B,CLEC1B,CLEC12B,CLEC12B	-6015,-6015,3904,3904
chr5:55772936-55773269	chr5	+	55772986	55773075	True	NM_024669,NM_005921	chr5,chr5	-,+	ANKRD55,MAP3K1	-243800,337824
chr12:4828601-4829113	chr12	+	4828640	4829148	True	NM_006422,NM_017417	chr12,chr12	-,+	AKAP3,GALNT8	-74297,603
chr8:128455414-128457094	chr8	+	128455785	128457133	True	NM_001159542,NR_024393	chr8,chr8	+,-	POU5F1B,LOC727677	-27980,37301
chr4:71566526-71568141	chr4	+	71567103	71567774	True	NM_144646,NM_001130709	chr4,chr4	-,+	IGJ,RUFY3	-34755,2879
chr3:196228755-196229009	chr3	+	196228759	196229057	True	NM_001105573,NM_152617	chr3,chr3	+,-	FBXO45,RNF168	66667,1632
chr22:30793177-30793429	chr22	+	30793183	30793478	True	NM_033382,NM_001204204,NM_001017981,NM_012429	chr22,chr22,chr22,chr22	+,+,-,+	SEC14L2,SEC14L2,RNF215,SEC14L2	-304,-304,-9881,-304
chrX:9435407-9435715	chrX	+	9435564	9435753	True	NM_001139466,NM_001139467,NM_005647,NM_001139468,NM_000273	chrX,chrX,chrX,chrX,chrX	+,+,+,+,-	TBL1X,TBL1X,TBL1X,TBL1X,GPR143	-4290,-4290,-2424,-4290,298302
chr1:48277230-48278996	chr1	+	48277384	48278920	True	NM_001194986,NM_004474	chr1,chr1	-,+	LOC388630,FOXD2	183692,-375746
chr7:6865987-6866631	chr7	+	6865987	6866105	True	NM_198097,NM_173565	chr7,chr7	-,+	C7orf28B,RSPH10B	-61,-72298
chr7:6865987-6866631	chr7	-	5938162	5938230	False	NM_001099697,NM_015622	chr7,chr7	-,+	RSPH10B2,CCZ1	72134,110
chr6:152015642-152017461	chr6	+	152015988	152017323	True	NM_017909,NM_001122742	chr6,chr6	-,+	RMND1,ESR1	-242672,-4408
chr17:56832493-56833029	chr17	+	56832511	56833057	True	NM_014906,NM_198393	chr17,chr17	+,-	PPM1E,TEX14	174,-63095
chr12:757537-758303	chr12	+	757579	758098	True	NM_001184985,NM_016533	chr12,chr12	+,-	WNK1,NINJ2	103990,14714
chr16:74328850-74330280	chr16	+	74329125	74330250	True	NR_026950,NM_002811	chr16,chr16	-,+	LOC283922,PSMD7	71953,422
chr17:79449252-79450261	chr17	+	79449289	79450279	True	NM_001077182,NM_001199954	chr17,chr17	+,-	FSCN2,ACTG1	45137,29663
chr1:206683223-206685053	chr1	+	206683395	206684987	True	NM_182664,NM_001201478,NM_182663	chr1,chr1,chr1	+,-,+	RASSF5,EIF2D,RASSF5	-2581,100967,-2581
chr14:73359888-73360092	chr14	+	73360017	73360111	True	NM_012074,NM_001163508	chr14,chr14	-,+	DPF3,DCAF4	748,32928
chrX:12925939-12926178	chrX	+	12926026	12926182	True	NM_138636,NR_030727	chrX,chrX	+,-	TLR8,LOC349408	-1338,35289
chr2:201756704-201757007	chr2	+	201756704	201757050	True	NM_001142356,NM_032472,NM_001142355,NM_001136039,NM_130906,NM_021824	chr2,chr2,chr2,chr2,chr2,chr2	+,-,+,+,-,+	NIF3L1,PPIL3,NIF3L1,NIF3L1,PPIL3,NIF3L1	-114,-2855,-2705,-2705,-2855,-2647
chr5:14149628-14150940	chr5	+	14149841	14150945	True	NM_001369,NM_007118	chr5,chr5	-,+	DNAH5,TRIO	-205252,-6064
chr17:46115895-46117203	chr17	+	46115938	46117102	True	NM_003204,NR_029687,NM_016429	chr17,chr17,chr17	+,-,-	NFE2L1,MIR152,COPZ2	8583,-1325,-786
chr14:100150306-100150530	chr14	+	100150305	100150369	True	NM_001144995,NM_006668	chr14,chr14	-,+	CCDC85C,CYP46A1	-79578,385
chr8:86875228-86877069	chr8	+	86875228	86877108	True	NR_003594	chr8	-	REXO1L2P	-35057
chr3:193924461-193926089	chr3	+	193924461	193925960	True	NR_024480,NM_005524	chr3,chr3	-,+	LOC100131551,HES1	104683,-70581
chr13:107201392-107202522	chr13	+	107201487	107202566	True	NM_004093,NR_034119	chr13,chr13	-,+	EFNB2,LOC728192	-14099,-172637
chr16:2187571-2188258	chr16	+	2187873	2187982	True	NM_001009944,NM_000296,NR_037467,NM_014353	chr16,chr16,chr16,chr16	-,-,-,+	PKD1,PKD1,MIR3180-5,RAB26	-1974,-1974,-1743,10668
chr10:93219853-93221464	chr10	+	93219945	93221090	True	NR_024467,NM_182765	chr10,chr10	-,+	LOC100188947,HECTD2	150186,-49913
chr11:108160707-108161682	chr11	+	108160862	108161673	True	NM_000051,NM_002519	chr11,chr11	+,-	ATM,NPAT	-67364,-67497
chr1:230511643-230513271	chr1	+	230511707	230513137	True	NM_001145036,NM_024554	chr1,chr1	+,-	COG2,PGBD5	265064,304
chr3:113760379-113761585	chr3	+	113760401	113761620	True	NM_020817,NM_024638	chr3,chr3	-,+	KIAA1407,QTRTD1	13892,13990
chr7:120976659-120978613	chr7	+	120976797	120978582	True	NM_057168,NM_001040020	chr7,chr7	+,-	WNT16,FAM3C	-7760,57891
chr5:5419310-5420135	chr5	+	5419369	5420177	True	NM_015325,NR_028351	chr5,chr5	+,-	KIAA0947,FLJ33360	2629,917278
chr3:13115540-13117290	chr3	+	13115587	13117110	True	NM_012298,NM_001134382	chr3,chr3	+,-	CAND2,IQSEC1	-277468,-970
chr19:51396019-51396455	chr19	+	51396134	51396502	True	NR_002948,NM_005551	chr19,chr19	-,+	KLKP1,KLK2	3202,-19496
chr2:20793621-20794803	chr2	+	20793847	20794817	True	NM_022460,NM_182828	chr2,chr2	-,+	HS1BP3,GDF7	56097,71606
chr17:17947708-17948153	chr17	+	17947713	17948181	True	NM_024052,NM_145691	chr17,chr17	+,-	C17orf39,ATPAF2	-5155,-5233
chr1:200623261-200625049	chr1	+	200623616	200624818	True	NM_203459,NM_001031725	chr1,chr1	+,-	CAMSAP1L1,DDX59	83867,14366
chr12:53902065-53902546	chr12	+	53902356	53902584	True	NM_003717,NM_004178,NM_134323,NM_001193511,NM_134324,NM_006301	chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,-,+,-	NPFF,TARBP2,TARBP2,MAP3K12,TARBP2,MAP3K12	-934,-7703,-7703,-8912,-7031,-8912
chr17:79482399-79482692	chr17	+	79482404	79482600	True	NM_001077182,NM_001199954,NM_001614,NR_037688	chr17,chr17,chr17,chr17	+,-,-,-	FSCN2,ACTG1,ACTG1,ACTG1	12816,-2512,-2512,-2512
chr1:74615729-74617273	chr1	+	74615781	74617155	True	NM_001105659,NM_001199328	chr1,chr1	-,+	LRRIQ3,FPGT	46775,46740
chr16:88716588-88717000	chr16	+	88716688	88716900	True	NM_013278,NM_000101	chr16,chr16	+,-	IL17C,CYBA	-11738,607
chr21:45285875-45286785	chr21	+	45285923	45286620	True	NR_026961,NM_020132	chr21,chr21	-,+	LOC284837,AGPAT3	-53475,-859
chr17:2306019-2307387	chr17	+	2306141	2307065	True	NM_020310,NM_001098509	chr17,chr17	-,+	MNT,SGSM2	-1883,-65384
chr1:151149308-151149715	chr1	+	151149313	151149517	True	NM_013353,NR_037937	chr1,chr1	-,+	TMOD4,SCNM1	-766,-10866
chr10:35415399-35415622	chr10	+	35415515	35415599	True	NM_182850,NM_182853,NM_181571,NM_183060,NM_183013,NM_001198777,NM_001881	chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,-,+	CREM,CREM,CREM,CREM,CREM,CUL2,CREM	201,201,788,788,201,-35945,201
chr22:25378784-25379311	chr22	+	25378793	25379281	True	NM_001145206,NM_001001663	chr22,chr22	+,-	KIAA1671,TMEM211	44659,-43479
chr1:171705512-171707401	chr1	+	171705514	171707444	True	NM_001007239,NM_003762,NR_033704,NM_001185127	chr1,chr1,chr1,chr1	+,-,-,-	METTL13,VAMP4,VAMP4,VAMP4	43316,3990,3990,3990
chr13:21519921-21520201	chr13	+	21520029	21520199	True	NM_022459,NM_005870	chr13,chr13	-,+	XPO4,SAP18	-43116,194453
chr7:72720799-72721619	chr7	+	72721047	72721483	True	NM_148956,NM_001168348,NM_018044,NM_001135211,NM_001168347	chr7,chr7,chr7,chr7,chr7	-,-,-,+,-	NSUN5,NSUN5,NSUN5,FKBP6,NSUN5	1431,1431,1431,20671,1431
chr3:14689843-14690177	chr3	+	14689864	14690215	True	NM_016474,NM_001080423	chr3,chr3	+,-	C3orf19,GRIP2	3037,-106276
chr1:145205877-145206450	chr1	+	145205920	145206290	True	NM_203458,NM_022359	chr1,chr1	+,-	NOTCH2NL,PDE4DIP	2820,-129734
chr1:145205877-145206450	chr1	-	120615103	120615459	False	NM_001200001,NM_024408,NM_001100910	chr1,chr1,chr1	-,-,+	NOTCH2,NOTCH2,FAM72B	-2786,-2786,223545
chr11:103953518-103954084	chr11	+	103953654	103954057	True	NM_025208,NM_001001711	chr11,chr11	-,+	PDGFD,DDI1	81025,-46398
chr11:57147984-57149376	chr11	+	57148174	57149212	True	NM_002728,NM_006093,NM_002559	chr11,chr11,chr11	-,-,+	PRG2,PRG3,P2RX3	8968,-87,-42276
chr2:229393547-229394415	chr2	+	229393701	229394242	True	NM_178821,NM_030623	chr2,chr2	+,-	WDR69,SPHKAP	-657425,-347340
chr19:10491683-10492272	chr19	+	10491692	10492171	True	NM_001111307,NM_003331	chr19,chr19	+,-	PDE4A,TYK2	39161,-444
chr4:139107177-139107664	chr4	+	139107179	139107649	True	NR_037866,NM_012118	chr4,chr4	-,+	LOC641365,CCRN4L	-55340,829293
chr6:36099250-36099718	chr6	+	36099373	36099761	True	NM_002754,NM_052961	chr6,chr6	+,-	MAPK13,SLC26A8	-1169,-106960
chr17:73451481-73452533	chr17	+	73451628	73452469	True	NM_014738,NM_203506	chr17,chr17	+,-	KIAA0195,GRB2	194,-49838
chr10:121398578-121399928	chr10	+	121398590	121399966	True	NM_004281,NM_003252	chr10,chr10	+,-	BAG3,TIAL1	10915,-42049
chr6:28131040-28131610	chr6	+	28131050	28131520	True	NR_002936,NM_001145129	chr6,chr6	-,+	LOC222699,ZNF389	55245,-1552
chr16:50111431-50112926	chr16	+	50111505	50112951	True	NM_182922,NM_015069	chr16,chr16	+,-	HEATR3,ZNF423	-11675,-250587
chr3:122605911-122606525	chr3	+	122605910	122606343	True	NM_024610,NR_024618	chr3,chr3	-,+	HSPBAP1,LOC100129550	-93260,-608
chr1:31538016-31538340	chr1	+	31538117	31538331	True	NM_001020658,NM_014676,NR_002762	chr1,chr1,chr1	-,-,+	PUM1,PUM1,PRO0611	283,283,-77256
chr7:190421-190683	chr7	+	190422	190708	True	NM_002607,NM_020223	chr7,chr7	-,+	PDGFA,FAM20C	368823,2260
chr3:128187231-128187457	chr3	+	128187238	128187416	True	NM_153330,NR_037890	chr3,chr3	-,+	DNAJB8,LOC285224	-1147,-4852
chr5:83042715-83043024	chr5	+	83042794	83042865	True	NM_001884,NM_004385	chr5,chr5	-,+	HAPLN1,VCAN	-25898,-275352
chr19:44037311-44037545	chr19	+	44037310	44037372	True	NM_014297,NM_174945	chr19,chr19	-,+	ETHE1,ZNF575	-5914,-21
chr2:70057651-70058097	chr2	+	70057679	70057875	True	NM_178439,NM_152792	chr2,chr2	+,-	GMCL1,ASPRV1	-912,131572
chr1:25561059-25561865	chr1	+	25561304	25561726	True	NM_001127691,NM_207170,NM_015484	chr1,chr1,chr1	+,-,-	RHD,SYF2,SYF2	37254,-2291,-2291
chr19:5680181-5680451	chr19	+	5680224	5680434	True	NM_205767,NM_198708,NM_033643,NM_198533,NM_015414,NM_198706,NM_198707,NM_198704,NM_198705	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,+,+,+,+,+,+,+,+	C19orf70,HSD11B1L,RPL36,HSD11B1L,RPL36,HSD11B1L,HSD11B1L,HSD11B1L,HSD11B1L	527,640,9837,612,9911,640,617,600,600
chr19:55739218-55739573	chr19	+	55739222	55739590	True	NM_173804,NM_032430	chr19,chr19	-,+	TMEM86B,BRSK1	1092,55943
chr19:17902291-17903241	chr19	+	17902302	17903100	True	NM_014256,NM_005543	chr19,chr19	+,-	B3GNT3,INSL3	2818,29270
chr9:127615023-127615361	chr9	+	127615080	127615264	True	NM_007209,NM_001045476	chr9,chr9	-,+	RPL35,WDR38	9026,490
chr12:5480720-5481948	chr12	+	5481002	5481943	True	NM_020373,NM_001102654	chr12,chr12	-,+	ANO2,NTF3	573514,59336
chr11:69290303-69290511	chr11	+	69290309	69290551	True	NM_153451,NM_053056	chr11,chr11	-,+	ORAOV1,CCND1	199664,165321
chr17:75134503-75135412	chr17	+	75135018	75135247	True	NR_036200,NM_001039573,NM_003003,NM_001143999,NM_001143998	chr17,chr17,chr17,chr17,chr17	-,+,+,+,+	MIR4316,SEC14L1,SEC14L1,SEC14L1,SEC14L1	257946,1757,1757,1757,1757
chr14:23387934-23388186	chr14	+	23387951	23388134	True	NM_001077351,NM_173527,NM_001077352,NM_018107	chr14,chr14,chr14,chr14	-,+,-,-	RBM23,REM2,RBM23,RBM23	312,-35570,312,312
chr5:86708460-86708723	chr5	+	86708474	86708690	True	NM_001239,NM_022650,NM_001199189	chr5,chr5,chr5	-,+,-	CCNH,RASA1,CCNH	210,-143759,81
chr2:27253106-27254204	chr2	+	27253207	27253825	True	NM_001083590,NM_017727,NM_001134693	chr2,chr2,chr2	+,+,-	TMEM214,TMEM214,OST4	1948,1948,40792
chr5:179053571-179054075	chr5	+	179053727	179054127	True	NM_005520,NM_001040452	chr5,chr5	-,+	HNRNPH1,RUFY1	-3005,-67051
chr14:24597466-24598318	chr14	+	24597529	24597928	True	NM_016049,NM_203402,NM_006263,NM_176783	chr14,chr14,chr14,chr14	-,+,+,+	FAM158A,FITM1,PSME1,PSME1	12926,2746,7449,7449
chr10:51985030-51985570	chr10	+	51985204	51985579	True	NM_018232,NM_001143974	chr10,chr10	+,-	FAM21B,ASAH2	-147378,22855
chr10:51985030-51985570	chr10	+	48039911	48040286	False	NM_002900,NR_033407	chr10,chr10	-,+	RBP3,CTSL1P2	350769,115656
chr1:33638158-33638734	chr1	+	33638206	33638774	True	NM_152493,NM_018207	chr1,chr1	+,-	ZNF362,TRIM62	83399,8947
chr1:145293547-145294529	chr1	+	145294258	145294566	True	NM_032305,NM_001039703	chr1,chr1	-,+	POLR3GL,NBPF10	175871,-938
chr18:72347412-72347761	chr18	+	72347423	72347797	True	NM_017757,NR_024484,NM_001146190,NM_001146189	chr18,chr18,chr18,chr18	+,-,+,+	ZNF407,LOC400657,ZNF407,ZNF407	-4563,-82352,-4563,-4563
chr5:141337531-141337903	chr5	+	141337530	141337886	True	NM_016580,NM_183399,NM_001201365	chr5,chr5,chr5	-,+,+	PCDH12,RNF14,RNF14	791,8515,8515
chr16:57471703-57472424	chr16	+	57471729	57472456	True	NM_020313,NM_020312	chr16,chr16	-,+	CIAPIN1,COQ9	8973,8880
chr9:99540551-99540899	chr9	+	99540575	99540766	True	NM_014930,NR_026792	chr9,chr9	-,+	ZNF510,LOC441455	-247,-52523
chr1:110581368-110581833	chr1	+	110581406	110581802	True	NM_033088,NM_006492	chr1,chr1	+,-	FAM40A,ALX3	-4216,31570
chr10:62751347-62751566	chr10	+	62751487	62751610	True	NM_033379,NR_024554,NR_024555	chr10,chr10,chr10	+,-,-	CDK1,RHOBTB1,RHOBTB1	-213326,9177,9639
chr2:97310905-97311894	chr2	+	97310930	97311701	True	NM_017991,NM_001113382,NM_001115016	chr2,chr2,chr2	-,+,-	KIAA1310,FER1L5,KIAA1310	-6815,-2414,-6815
chr19:12864653-12864980	chr19	+	12864652	12864864	True	NM_024038,NM_017682	chr19,chr19	-,+	C19orf43,BEST2	-19123,-1296
chr1:233472141-233472882	chr1	+	233472526	233472838	True	NM_032435,NM_014801	chr1,chr1	+,-	KIAA1804,PCNXL2	-9073,-41067
chr1:115122409-115123936	chr1	+	115122969	115123844	True	NM_003176,NM_005872	chr1,chr1	+,-	SYCP1,BCAS2	273610,480
chr19:2014275-2014508	chr19	+	2014312	2014404	True	NM_001319,NM_017797	chr19,chr19	+,-	CSNK1G2,BTBD2	-73202,1348
chr16:67264646-67265059	chr16	+	67264789	67265097	True	NM_014187,NM_012163,NM_001004055	chr16,chr16,chr16	+,-,-	TMEM208,LRRC29,LRRC29	-3825,-4068,-3888
chr7:5080653-5080894	chr7	+	5080670	5080790	True	NM_001204513,NM_021163,NM_001204456,NM_198403	chr7,chr7,chr7,chr7	+,+,+,-	RBAK-LOC389458,RBAK,RBAK,MMD2	4661,4762,4661,-81826
chr9:102591484-102593301	chr9	+	102591531	102593331	True	NM_173199,NM_015051,NM_173200,NM_006981	chr9,chr9,chr9,chr9	+,-,+,+	NR4A3,ERP44,NR4A3,NR4A3	-7452,268049,-2580,-7452
chr12:62737382-62738854	chr12	+	62737554	62738746	True	NM_006313,NM_178539	chr12,chr12	+,-	USP15,FAM19A2	-83418,-151003
chr2:130689330-130690112	chr22	+	16372467	16372526	True	NM_001005239,NR_001591	chr22,chr22	-,+	OR11H1,psiTPTE22	77337,710274
chr11:77300364-77300588	chr11	+	77300409	77300559	True	NM_173039,NM_001293	chr11,chr11	+,-	AQP11,CLNS1A	120,48342
chr1:77636976-77638463	chr1	+	77637387	77638203	True	NM_174858,NM_005482	chr1,chr1	+,-	AK5,PIGK	109458,46980
chr1:67773723-67773955	chr1	+	67773802	67773890	True	NM_001018067,NM_001559	chr1,chr1	-,+	SERBP1,IL12RB2	122283,-812
chr1:11319452-11320319	chr1	+	11319452	11320220	True	NM_004958,NM_013319	chr1,chr1	-,+	MTOR,UBIAD1	2441,13034
chr15:101418677-101418965	chr15	+	101418681	101418995	True	NM_001040616,NM_000693	chr15,chr15	-,+	LINS,ALDH1A3	-276236,1013
chr3:193310719-193311089	chr3	+	193310731	193310997	True	NM_032279,NM_015560,NM_130832,NM_130833,NM_130831,NM_130836,NM_130837,NM_130834,NM_130835	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,+,+,+,+,+,+,+	ATP13A4,OPA1,OPA1,OPA1,OPA1,OPA1,OPA1,OPA1,OPA1	-38035,13,13,13,13,13,13,13,13
chr8:6878153-6879559	chr8	+	6878156	6879404	True	NM_001042500,NM_004084,NM_005217,NM_001164452	chr8,chr8,chr8,chr8	-,-,-,+	DEFA1B,DEFA1,DEFA3,FAM90A14	-2333,-2333,-2340,235021
chr17:79355186-79355604	chr17	+	79355189	79355641	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	17898,-50715
chr11:70507153-70507797	chr11	+	70507185	70507791	True	NM_133266,NM_138565	chr11,chr11	-,+	SHANK2,CTTN	182,-262624
chr15:59692647-59692960	chr15	+	59692667	59692923	True	NM_152450,NM_004998	chr15,chr15	+,-	FAM81A,MYO1E	37448,-27596
chr17:63102933-63104750	chr17	+	63102989	63104547	True	NM_006572,NM_001165933	chr17,chr17	-,+	GNA13,RGS9	-50069,28908
chrX:118704858-118705605	chrX	+	118704982	118705189	True	NM_001170569,NM_003336,NM_001170570,NM_181762,NM_181777,NM_022101	chrX,chrX,chrX,chrX,chrX,chrX	-,+,-,+,+,-	CXorf56,UBE2A,CXorf56,UBE2A,UBE2A,CXorf56	-5610,3309,-5585,3309,9108,-5585
chr5:81574120-81574406	chr5	+	81574280	81574450	True	NM_001017971,NM_001025	chr5,chr5	+,-	ATP6AP1L,RPS23	26715,-45
chr20:43881811-43883544	chr20	+	43882232	43883566	True	NM_003064,NM_003008	chr20,chr20	-,+	SLPI,SEMG2	-54,-32273
chr7:65214805-65215015	chr7	+	65214806	65214894	True	NR_003110,NM_000181,NR_002961	chr7,chr7,chr7	+,-,+	CCT6P1,GUSB,SNORA22	1197,232457,5618
chr20:62184308-62185135	chr20	+	62184409	62185149	True	NM_024059,NM_080823	chr20,chr20	+,-	C20orf195,SRMS	-87,-5552
chr9:100935922-100936252	chr9	+	100935930	100936124	True	NM_018946,NM_003389	chr9,chr9	+,-	NANS,CORO2A	-117022,-756
chr22:20001084-20001809	chr22	+	20001242	20001336	True	NM_152906,NM_001670	chr22,chr22	+,-	C22orf25,ARVCF	7294,3023
chr3:14445189-14445406	chr3	+	14445216	14445442	True	NM_001134367,NM_001080423,NM_001134368,NM_003043	chr3,chr3,chr3,chr3	+,-,+,+	SLC6A6,GRIP2,SLC6A6,SLC6A6	-1162,138196,-1162,-1162
chr6:33758054-33759603	chr6	+	33758340	33759579	True	NM_001143944,NM_002224,NM_181336	chr6,chr6,chr6	-,+,-	LEMD2,ITPR3,LEMD2	-3621,-169235,-1434
chr6:160211475-160211761	chr6	+	160211539	160211795	True	NR_002965,NM_014161,NM_173516,NM_030752,NM_001008897	chr6,chr6,chr6,chr6,chr6	-,+,+,-,-	SNORA29,MRPL18,PNLDC1,TCP1,TCP1	-4774,-98,9505,-804,-804
chrX:55057479-55057836	chrX	+	55057501	55057890	True	NM_001037967,NM_014481,NM_000032,NM_001037968	chrX,chrX,chrX,chrX	-,+,-,-	ALAS2,APEX2,ALAS2,ALAS2	-4,-30772,-4,-4
chr10:21460741-21461906	chr10	+	21460746	21461721	True	NM_001173484,NM_001195627,NM_213569	chr10,chr10,chr10	-,+,-	NEBL,MLLT10,NEBL	1445,361379,1445
chr3:129263720-129264179	chr3	+	129263762	129264238	True	NM_153833,NM_015103	chr3,chr3	+,-	H1FOO,PLXND1	-1756,61404
chr19:39898968-39899296	chr19	+	39899172	39899232	True	NM_019088,NM_003407,NM_022835	chr19,chr19,chr19	-,+,+	PAF1,ZFP36,PLEKHG2	-17493,-1736,4517
chr14:91527109-91527510	chr14	+	91527325	91527547	True	NM_182398,NM_004755,NM_001102366	chr14,chr14,chr14	-,-,+	RPS6KA5,RPS6KA5,C14orf159	-332,-332,52809
chr9:117915366-117916542	chr9	+	117915462	117916532	True	NM_017418,NM_002160	chr9,chr9	+,-	DEC1,TNC	-11416,-34976
chr10:44288725-44289700	chr10	+	44288766	44289716	True	NR_033923,NR_002726	chr10,chr10	+,-	C10orf136,HNRNPA3P1	51037,-2901
chr9:139962390-139962752	chr9	+	139962439	139962789	True	NM_207309,NM_178448	chr9,chr9	+,-	UAP1L1,C9orf140	9163,2289
chr19:41304851-41305056	chr19	+	41304895	41304957	True	NM_053046,NM_198476,NM_080732	chr19,chr19,chr19	+,-,+	EGLN2,C19orf54,EGLN2	376,-49067,90
chr18:3224185-3224820	chr18	+	3224304	3224620	True	NM_019856,NM_006471,NM_003803	chr18,chr18,chr18	-,+,-	MYOM1,MYL12A,MYOM1	-4198,22907,-4198
chr3:195347702-195348423	chr3	+	195347799	195348324	True	NM_001647,NR_003265	chr3,chr3	-,+	APOD,SDHAP2	-36723,36585
chr3:195347702-195348423	chr3	+	195476288	195476345	False	NM_001098516,NM_004532	chr3,chr3	+,-	MUC20,MUC4	-25248,62860
chr9:43033568-43035073	chr9	+	43033871	43035047	True	NR_026759,NR_026558	chr9,chr9	-,+	FAM95B1,AQP7P3	-559,-175770
chr9:43033568-43035073	chr9	-	69474281	69475457	False	NM_001085457,NM_001098805	chr9,chr9	-,+	CBWD6,ANKRD20A4	-211688,-92366
chr9:43033568-43035073	chr9	-	42466853	42468029	False	NR_003670,NR_026759	chr9,chr9	-,+	KGFLP2,FAM95B1	-447269,559
chr17:5489540-5490090	chr17	+	5489619	5489961	True	NM_014922,NM_024039,NM_033004,NM_033007,NM_033006,NM_001033053	chr17,chr17,chr17,chr17,chr17,chr17	-,+,-,-,-,-	NLRP1,MIS12,NLRP1,NLRP1,NLRP1,NLRP1	-1787,-99424,-1787,-1787,-1787,-1787
chr19:18633521-18634417	chr19	+	18633520	18634473	True	NM_001171948,NM_006532	chr19,chr19	+,-	C19orf50,ELL	34098,-583
chr2:177026751-177027243	chr2	+	177026777	177027261	True	NR_033979,NM_006898	chr2,chr2	-,+	LOC401022,HOXD3	26475,1543
chr7:100662952-100663183	chr7	+	100663005	100663203	True	NM_003378,NM_001040105	chr7,chr7	-,+	VGF,MUC17	145699,160
chr17:45122446-45123245	chr17	+	45122557	45122638	True	NM_203400,NM_054022	chr17,chr17	-,+	RPRML,GOSR2	-65943,-122132
chr1:166904683-166906049	chr1	+	166904732	166905643	True	NM_199351,NM_032858	chr1,chr1	-,+	ILDR2,MAEL	38975,52875
chr1:78510252-78511208	chr1	+	78510287	78511116	True	NM_003902,NM_017655	chr1,chr1	-,+	FUBP1,GIPC2	-65510,472
chr9:139256002-139256447	chr9	+	139256123	139256407	True	NM_001200003,NM_001145639,NM_001080849	chr9,chr9,chr9	+,+,-	GPSM1,GPSM1,DNLZ	-6922,-8665,1884
chr11:73472253-73472567	chr11	+	73472331	73472509	True	NM_198896,NM_016055,NM_002869	chr11,chr11,chr11	-,+,-	RAB6A,MRPL48,RAB6A	-130,26407,-130
chr18:13725063-13725994	chr18	+	13725185	13725959	True	NM_001098801,NM_152352,NM_003799	chr18,chr18,chr18	-,-,+	C18orf19,C18orf19,RNMT	682,682,744
chr16:85615037-85615275	chr16	+	85615085	85615303	True	NM_001134473,NM_016095	chr16,chr16	+,-	KIAA0182,GINS2	29725,107335
chr22:22855733-22856178	chr22	+	22855977	22856147	True	NR_027426,NM_080764	chr22,chr22	+,-	LOC648691,ZNF280B	45608,7408
chr1:201348932-201350446	chr1	+	201349359	201350356	True	NM_000364,NM_001005337,NM_001001431,NM_001001430,NM_001001432	chr1,chr1,chr1,chr1,chr1	-,+,-,-,-	TNNT2,PKP1,TNNT2,TNNT2,TNNT2	-2554,-96843,-2554,-2554,-2554
chr10:13204659-13204933	chr10	+	13204659	13204781	True	NM_018518,NM_145314,NM_182751	chr10,chr10,chr10	+,-,+	MCM10,UCMA,MCM10	-1156,71597,-1156
chr20:23619531-23620430	chr20	+	23619542	23620226	True	NM_000099,NR_001279	chr20,chr20	-,+	CST3,CSTT	-968,-119810
chr5:140807685-140808512	chr5	+	140807751	140808379	True	NM_032091,NM_032092,NM_003735,NM_005642,NM_018914,NR_001297,NM_032094	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,-,+,+,+	PCDHGA11,PCDHGA11,PCDHGA12,TAF7,PCDHGA11,PCDHGB8P,PCDHGA12	-7265,-7265,1778,-107400,-7265,-1949,1778
chr19:48893955-48894157	chr19	+	48894031	48894151	True	NM_006801,NM_000836	chr19,chr19	-,+	KDELR1,GRIN2D	709,3980
chr20:44881926-44882252	chr20	+	44881998	44882300	True	NM_152854,NM_021248	chr20,chr20	+,-	CD40,CDH22	-135143,-1664
chr16:22020001-22020271	chr16	+	22020013	22020165	True	NM_173806,NR_033694,NM_001164579	chr16,chr16,chr16	-,-,+	PDZD9,PDZD9,C16orf52	-7582,-7582,-608
chr7:72938613-72939615	chr7	+	72938843	72939483	True	NM_003508,NM_032408	chr7,chr7	+,-	FZD9,BAZ1B	-90786,-2228
chr18:33278868-33279978	chr18	+	33278968	33280006	True	NM_194281,NM_020474	chr18,chr18	-,+	INO80C,GALNT1	-201013,-44486
chr14:95047718-95048459	chr14	+	95047805	95048443	True	NM_173850,NM_000624	chr14,chr14	-,+	SERPINA12,SERPINA5	-63624,-125
chr1:217310420-217310904	chr1	+	217310471	217310938	True	NM_001134285,NM_138796	chr1,chr1	-,+	ESRRG,SPATA17	209,493756
chr2:88094133-88094874	chr2	+	88094147	88094765	True	NM_001078170,NM_001032392	chr2,chr2	-,+	RGPD2,PLGLB1	30581,-46592
chr2:88094133-88094874	chr2	-	87201797	87202415	False	NM_001032392,NM_001024457	chr2,chr2	-,+	PLGLB1,RGPD1	46608,-57120
chr1:28098886-28099348	chr1	+	28098888	28099382	True	NM_177424,NM_022873	chr1,chr1	+,-	STX12,IFI6	311,-100164
chr17:20224139-20224680	chr17	+	20224306	20224724	True	NM_001042685,NR_023380	chr17,chr17	-,+	LGALS9B,CCDC144C	146174,4
chr7:144529150-144529724	chr7	+	144529322	144529770	True	NM_005435,NM_022445,NM_001042482	chr7,chr7,chr7	+,-,-	ARHGEF5,TPK1,TPK1	-476888,3433,3433
chr3:147123713-147124094	chr3	+	147123723	147124127	True	NM_001168378,NM_001168379,NM_032153,NM_003412	chr3,chr3,chr3,chr3	-,-,-,+	ZIC4,ZIC4,ZIC4,ZIC1	-1652,-416,330,3053
chr7:5012476-5012782	chr7	+	5012577	5012760	True	NM_198403,NR_023384,NR_023385,NR_015449	chr7,chr7,chr7,chr7	-,+,+,+	MMD2,RNF216L,RNF216L,RNF216L	-13733,855,855,855
chr9:123555818-123556281	chr9	+	123555863	123556294	True	NR_027442,NM_012164	chr9,chr9	+,-	LOC100288842,FBXW2	-139,-123
chr5:180633255-180633665	chr5	+	180633290	180633634	True	NM_203295,NM_203294,NM_203297,NM_203296,NM_033342,NM_203293,NM_033549	chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,-,-,+	TRIM7,TRIM7,TRIM7,TRIM7,TRIM7,TRIM7,TRIM41	-1950,-1950,-5360,-1950,-1113,-1113,16671
chr17:2495295-2495728	chr17	+	2495295	2495521	True	NM_000430,NM_024086	chr17,chr17	+,-	PAFAH1B1,METTL16	1401,-80095
chr20:32850466-32851090	chr20	+	32850476	32851052	True	NM_001672,NM_000687	chr20,chr20	+,-	ASIP,AHCY	-2356,40221
chr5:128801772-128803512	chr5	+	128801924	128803561	True	NM_133638,NM_001999	chr5,chr5	+,-	ADAMTS19,FBN2	-5872,-928189
chr18:13726252-13726455	chr18	+	13726370	13726476	True	NM_001098801,NM_152352,NM_003799	chr18,chr18,chr18	-,-,+	C18orf19,C18orf19,RNMT	165,165,227
chr6:39692083-39692786	chr6	+	39692250	39692738	True	NM_145027,NM_001201427	chr6,chr6	-,+	KIF6,DAAM2	493,67420
chr1:182768496-182769955	chr1	+	182768623	182769839	True	NM_033345,NM_030769	chr1,chr1	-,+	RGS8,NPL	-126556,-10097
chr19:10215549-10215763	chr19	+	10215548	10215644	True	NM_002566,NM_031917,NM_001198690,NR_003688,NR_004381,NM_001040664,NM_020230	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+,+	P2RY11,ANGPTL6,PPAN-P2RY11,SNORD105B,SNORD105,PPAN-P2RY11,PPAN	6552,-2123,1254,4780,2682,1254,1254
chr10:115999647-115999893	chr10	+	115999660	115999784	True	NM_198496,NM_018017	chr10,chr10	+,-	VWA2,C10orf118	-693,-65296
chr4:29136975-29137772	chr4	+	29137023	29137791	True	NR_036237,NM_000730	chr4,chr4	+,-	MIR4275,CCKAR	-315874,-2644981
chr17:40720235-40720906	chr17	+	40720397	40720907	True	NM_016556,NM_170607,NM_198204,NM_198205,NM_025233,NM_001042531,NM_001042530,NM_001042532,NM_013290,NM_001042529	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,+,+,+,+,+,+,-,+	PSMC3IP,MLX,MLX,MLX,COASY,COASY,COASY,COASY,PSMC3IP,COASY	8890,-1370,-1370,-1370,-6356,-6356,-6356,-6356,8890,-6356
chr3:8774775-8775212	chr3	+	8774868	8775056	True	NM_033337,NM_000916,NM_001234	chr3,chr3,chr3	+,-,+	CAV3,OXTR,CAV3	429,36294,439
chr6:25727448-25727778	chr6	+	25727492	25727629	True	NM_170745,NM_170610	chr6,chr6	-,+	HIST1H2AA,HIST1H2BA	-702,-410
chr17:17486097-17487564	chr17	+	17486945	17487346	True	NM_007169,NM_030665,NM_148172,NM_148173	chr17,chr17,chr17,chr17	-,+,-,-	PEMT,RAI1,PEMT,PEMT	-1200,97440,7699,-6166
chr15:83854044-83854312	chr15	+	83854071	83854327	True	NM_016073,NM_023003	chr15,chr15	-,+	HDGFRP3,TM6SF1	22044,-77811
chr2:55199841-55201377	chr2	+	55199956	55201402	True	NM_001039753,NM_007008	chr2,chr2	+,-	EML6,RTN4	-247858,36126
chr8:38645179-38645386	chr8	+	38645215	38645385	True	NM_006283,NR_003129,NM_001122824	chr8,chr8,chr8	+,-,+	TACC1,RNF5P1,TACC1	-544,-186440,-544
chr15:72946391-72946820	chr15	+	72946481	72946587	True	NR_002780,NM_018652	chr15,chr15	-,+	HIGD2B,GOLGA6B	31967,450
chr15:72946391-72946820	chr15	-	74375341	74375447	False	NM_001130136,NM_001038640	chr15,chr15	+,-	ISLR2,GOLGA6A	46267,-450
chr15:72946391-72946820	chr15	+	75550342	75550448	False	NR_030360,NM_001164404	chr15,chr15	-,+	MIR631,GOLGA6C	95642,450
chr15:72946391-72946820	chr15	+	75574619	75574725	False	NR_030360,NM_001145224	chr15,chr15	-,+	MIR631,GOLGA6D	71365,456
chr15:83655139-83655388	chr15	+	83655194	83655378	True	NM_031452,NM_001160116	chr15,chr15	+,-	FAM103A1,C15orf40	-250,25065
chr12:94940191-94940449	chr12	+	94940207	94940471	True	NM_016122,NR_027035	chr12,chr12	-,+	CCDC41,LOC144486	-86443,-86479
chr5:113695823-113696522	chr5	+	113695826	113696469	True	NM_018700,NM_021614	chr5,chr5	-,+	TRIM36,KCNN2	819824,1546
chr16:55358882-55359228	chr16	+	55358882	55359198	True	NR_034105,NM_024335	chr16,chr16	-,+	CRNDE,IRX6	-395803,-462
chr7:150146003-150146914	chr7	+	150146011	150146905	True	NM_175571,NM_002889	chr7,chr7	+,-	GIMAP8,RARRES2	1056,-107248
chr2:220030037-220030777	chr2	+	220030206	220030574	True	NM_024782,NM_001144889,NM_024293,NM_001144890,NM_144712	chr2,chr2,chr2,chr2,chr2	-,-,+,-,-	NHEJ1,SLC23A3,FAM134A,SLC23A3,SLC23A3	-4619,4293,12364,4293,4293
chr9:88969860-88971381	chr9	+	88969925	88970956	True	NM_001185059,NM_001185074,NM_024617,NM_024635	chr9,chr9,chr9,chr9	-,-,-,+	ZCCHC6,ZCCHC6,ZCCHC6,NAA35	-523,-523,-523,-413928
chr12:10532044-10532957	chr12	+	10532262	10532582	True	NM_007360,NM_007334	chr12,chr12	-,+	KLRK1,KLRD1	10131,-71909
chr15:30919525-30920374	chr15	+	30919531	30920252	True	NM_148911,NM_001039841	chr15,chr15	-,+	CHRFAM7A,ARHGAP11B	-233667,-704
chr15:30919525-30920374	chr15	+	32908919	32909642	False	NM_014783,NM_199357,NR_036650	chr15,chr15,chr15	+,+,-	ARHGAP11A,ARHGAP11A,LOC100288615	-1280,-1280,-82977
chr5:140221304-140221710	chr5	+	140221386	140221680	True	NM_014005,NM_002109,NM_031856,NM_031857,NM_018910,NM_018911,NM_031852	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,-,+,+,+,+,+	PCDHA9,HARS,PCDHA8,PCDHA9,PCDHA7,PCDHA8,PCDHA7	5676,-150415,-530,5676,-7468,-530,-7468
chr9:14692812-14693051	chr9	+	14692843	14693021	True	NR_003920,NM_178566	chr9,chr9	+,-	LOC389705,ZDHHC21	300303,509
chr1:149193570-149193963	chr1	+	149193590	149193992	True	NM_001024599,NR_027002	chr1,chr1	-,+	HIST2H2BF,LOC388692	205287,85483
chr3:32440301-32441670	chr3	+	32440489	32441316	True	NM_181472,NM_017801,NM_138410	chr3,chr3,chr3	+,-,+	CMTM7,CMTM6,CMTM7	-7377,103137,-7377
chr16:25013256-25014999	chr16	+	25013552	25014551	True	NM_001006634,NM_001032391	chr16,chr16	-,+	ARHGAP17,LCMT1	12184,108495
chr16:23193408-23193614	chr16	+	23193544	23193660	True	NM_001039,NM_020718	chr16,chr16	+,-	SCNN1G,USP31	379,-32953
chr5:79325715-79326281	chr5	+	79325810	79326017	True	NM_003248,NM_001167741	chr5,chr5	+,-	THBS4,MTX3	5152,-38722
chr1:192281793-192282714	chr1	+	192281946	192282751	True	NM_001039152,NM_001199261	chr1,chr1	+,-	RGS21,UCHL5	3370,745822
chr4:6471992-6472358	chr4	+	6471998	6472212	True	NM_020416,NM_015274	chr4,chr4	-,+	PPP2R2C,MAN2B2	2164,104689
chr14:105778702-105779710	chr14	+	105778825	105779587	True	NM_001519,NM_015197,NM_001100913	chr14,chr14,chr14	-,+,+	BRF1,PACS2,PACS2	-11496,1493,1493
chr2:197459123-197460647	chr2	+	197459155	197460607	True	NM_020760,NM_001080539	chr2,chr2	-,+	HECW2,CCDC150	-1820,43748
chr16:764747-764993	chr16	+	764800	765008	True	NM_153350,NM_024042,NM_023933	chr16,chr16,chr16	-,+,+	FBXL16,METRN,FAM173A	-8975,164,6149
chr13:103451448-103451710	chr13	+	103451458	103451734	True	NM_001159596,NM_024089,NM_017693,NM_001204425	chr13,chr13,chr13,chr13	+,-,+,+	BIVM,KDELC1,BIVM,BIVM-ERCC5	-110,-54,-110,7761
chr3:148859164-148859479	chr3	+	148859163	148859311	True	NM_032383,NM_139048	chr3,chr3	+,-	HPS3,HLTF	-11843,-54822
chr20:3641823-3642729	chr20	+	3641841	3642751	True	NM_145762,NM_022139,NM_001197327	chr20,chr20,chr20	-,-,+	GFRA4,GFRA4,HSPA12B	1345,1345,70565
chr6:24775706-24776484	chr6	+	24775854	24776224	True	NM_030939,NM_015895	chr6,chr6	-,+	C6orf62,GMNN	-56451,-741
chr3:150643852-150644245	chr3	+	150643868	150644263	True	NR_024066,NM_052995	chr3,chr3	+,-	CLRN1OS,CLRN1	46201,17810
chr10:124908480-124909114	chr10	+	124908602	124908794	True	NM_001007793,NM_004725,NM_022466,NM_005519	chr10,chr10,chr10,chr10	+,+,-,+	BUB3,BUB3,IKZF5,HMX2	4965,4965,-140291,-1022
chr2:202330656-202332214	chr2	+	202330975	202332255	True	NM_015049,NM_018571	chr2,chr2	-,+	TRAK2,STRADB	-14656,-14634
chr16:6824138-6825253	chr16	+	6824169	6824836	True	NM_201598,NM_001142334	chr16,chr16	-,+	FAM86A,RBFOX1	-1676380,-418
chr21:44555964-44556294	chr21	+	44555975	44556291	True	NM_006758,NM_000394	chr21,chr21	-,+	U2AF1,CRYAA	-28287,32849
chr5:126992559-126993350	chr5	+	126992643	126993389	True	NM_001048252,NM_001127385,NR_015360	chr5,chr5,chr5	+,+,-	CTXN3,CTXN3,FLJ33630	-7982,-3988,425427
chr18:12407664-12407910	chr18	+	12407669	12407849	True	NM_006796,NM_001142405,NM_006553	chr18,chr18,chr18	-,+,+	AFG3L2,SLMO1,SLMO1	-30394,45,45
chr7:150884087-150884441	chr7	+	150884183	150884429	True	NM_001142460,NM_080871,NM_001142459,NM_019015	chr7,chr7,chr7,chr7	-,-,-,+	ASB10,ASB10,ASB10,CHPF2	99,540,99,45155
chr1:48382898-48383483	chr1	+	48382948	48383525	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	79087,304831
chr14:61448189-61448658	chr14	+	61448255	61448657	True	NM_001172702,NM_020810,NM_153811,NR_033344	chr14,chr14,chr14,chr14	+,-,+,+	SLC38A6,TRMT5,SLC38A6,SLC38A6	-474,-473,-474,-341
chr3:4793368-4794018	chr3	+	4793473	4794051	True	NR_004428,NM_003670	chr3,chr3	-,+	EGOT,BHLHE40	-199,227045
chr11:118902897-118903766	chr11	+	118903267	118903532	True	NR_037429,NM_001164280,NM_001164279,NM_001164278,NM_001467,NM_001164277	chr11,chr11,chr11,chr11,chr11,chr11	+,-,-,-,-,-	MIR3656,SLC37A4,SLC37A4,SLC37A4,SLC37A4,SLC37A4	-13664,-2989,-1651,-1651,-1651,-1651
chr10:98480407-98481034	chr10	+	98480771	98481069	True	NM_152309,NM_001170765	chr10,chr10	-,+	PIK3AP1,LCOR	-492,110947
chr5:32313900-32315146	chr5	+	32314603	32315186	True	NM_001040446,NM_006713	chr5,chr5	-,+	MTMR12,SUB1	-1489,270418
chr17:40729956-40730449	chr17	+	40730014	40730250	True	NM_016556,NM_198205,NM_013290	chr17,chr17,chr17	-,+,-	PSMC3IP,MLX,PSMC3IP	-267,-10987,-267
chr19:49589029-49589468	chr19	+	49589122	49589458	True	NM_031886,NM_003089	chr19,chr19	-,+	KCNA7,SNRNP70	-12924,-710
chr14:95566932-95568227	chr14	+	95566984	95568024	True	NR_015415,NM_001195573	chr14,chr14	+,-	FLJ45244,DICER1	56000,31866
chr2:91767904-91769754	chr2	+	91768048	91769746	True	NR_003503,NR_027238	chr2,chr2	+,-	GGT8P,LOC654342	193621,78279
chr12:100354812-100356669	chr12	+	100355080	100355826	True	NM_152788,NR_031728	chr12,chr12	-,+	ANKS1B,MIR1827	22666,227835
chr3:47518607-47518915	chr3	+	47518614	47518779	True	NM_012235,NM_015466	chr3,chr3	-,+	SCAP,PTPN23	-1169,-96174
chr10:61468799-61468999	chr10	+	61468961	61469025	True	NM_194298,NM_001143774	chr10,chr10	-,+	SLC16A9,PHYHIPL	674,-531785
chr12:10193342-10193767	chr12	+	10193478	10193572	True	NM_016509,NM_207345	chr12,chr12	-,+	CLEC1B,CLEC9A	-41579,-10265
chr1:156398105-156399785	chr1	+	156398198	156399820	True	NM_006365,NR_026549,NR_029691	chr1,chr1,chr1	-,+,-	C1orf61,RHBG,MIR9-1	-86,-59247,-7977
chr14:61787437-61787836	chr14	+	61787501	61787829	True	NM_001017970,NM_006255	chr14,chr14	-,+	TMEM30B,PRKCH	-38971,685
chr3:48285021-48286395	chr3	+	48285386	48286122	True	NM_016089,NM_201567	chr3,chr3	+,-	ZNF589,CDC25A	-2841,-55585
chr1:43770374-43770605	chr1	+	43770395	43770569	True	NM_005424,NM_001164829	chr1,chr1	+,-	TIE1,C1orf210	-3782,-19107
chr11:73715012-73716336	chr11	+	73715122	73716180	True	NM_022803,NM_003356,NM_153614	chr11,chr11,chr11	-,-,+	UCP3,UCP3,DNAJB13	4152,4152,-53809
chr12:51322412-51322740	chr12	+	51322489	51322671	True	NM_014033,NM_001174130	chr12,chr12	+,-	METTL7A,SLC11A2	-4019,80432
chr16:85145306-85145581	chr16	+	85145466	85145540	True	NR_033984,NM_198491	chr16,chr16	+,-	LOC400548,FAM92B	25215,624
chr19:5852814-5853379	chr19	+	5853013	5853279	True	NM_001097641,NM_001097640,NM_004558,NM_001097639,NM_000149	chr19,chr19,chr19,chr19,chr19	-,-,+,-,-	FUT3,FUT3,NRTN,FUT3,FUT3	-1528,-1528,-29246,-1528,-1528
chr5:18736952-18738397	chr5	+	18737115	18738417	True	NM_001167667,NM_006317	chr5,chr5	-,+	CDH18,BASP1	1249986,-1519429
chr15:83379961-83381838	chr15	+	83379994	83381584	True	NR_034139,NM_004644,NR_003011	chr15,chr15,chr15	-,-,+	LOC338963,AP3B2,SCARNA15	1211,-1359,43112
chr16:67914710-67915417	chr16	+	67914824	67915464	True	NM_014329,NM_025082,NM_198443	chr16,chr16,chr16	+,-,+	EDC4,CENPT,NRN1L	-7876,-33463,3316
chr10:121414101-121414306	chr10	+	121414158	121414344	True	NM_004281,NM_003252	chr10,chr10	+,-	BAG3,TIAL1	-3329,-57617
chr12:25956177-25956650	chr12	+	25956240	25956675	True	NM_001164748,NR_036188	chr12,chr12	+,-	RASSF8,MIR4302	155288,70387
chr9:86433387-86433620	chr9	+	86433395	86433653	True	NM_025211,NM_001135953,NM_024945	chr9,chr9,chr9	-,-,+	GKAP1,GKAP1,RMI1	-643,-643,161983
chr9:86433387-86433620	chr9	-	88419324	88419374	False	NR_029410,NM_015239	chr9,chr9	+,-	LOC389765,AGTPBP1	1542,-62380
chr12:121079345-121080172	chr12	+	121079396	121080162	True	NM_031205,NM_001033677,NM_198202,NM_004276	chr12,chr12,chr12,chr12	+,+,-,+	CABP1,CABP1,POP5,CABP1	8208,-1025,-60195,8208
chr12:53896287-53896893	chr12	+	53896308	53896674	True	NM_003717,NM_004178,NM_134323,NM_001193511,NM_134324,NM_006301	chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,-,+,-	NPFF,TARBP2,TARBP2,MAP3K12,TARBP2,MAP3K12	4798,-1657,-1657,-2864,-985,-2864
chr19:57051252-57052456	chr19	+	57051299	57052319	True	NR_030740,NM_020828	chr19,chr19	-,+	ZNF667,ZFP28	-62529,-1033
chr5:37370328-37370836	chr5	+	37370530	37370836	True	NM_153485,NM_018034,NM_004298	chr5,chr5,chr5	-,+,-	NUP155,WDR70,NUP155	411,8575,101
chr11:62478798-62479131	chr11	+	62478916	62479170	True	NM_001130702,NR_037949,NR_037948,NM_001122955,NM_012202,NM_032667	chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,+,-	BSCL2,BSCL2,BSCL2,BSCL2,GNG3,BSCL2	-5129,-1825,-1825,-3737,-3853,-5129
chr12:21815669-21816209	chr12	+	21815676	21816230	True	NM_030572,NM_002300,NM_001174097	chr12,chr12,chr12	+,-,-	C12orf39,LDHB,LDHB	-136471,-4887,-4948
chr4:44634954-44636471	chr4	+	44635003	44636276	True	NM_021927,NM_182592	chr4,chr4	+,-	GUF1,YIPF7	44156,17433
chr12:52306958-52307365	chr12	+	52307064	52307394	True	NM_001077401,NM_000020,NM_001013690	chr12,chr12,chr12	+,+,-	ACVRL1,ACVRL1,FIGNL2	-1002,-5913,-81363
chr21:37756239-37756624	chr21	+	37756238	37756621	True	NM_012130,NM_005441	chr21,chr21	-,+	CLDN14,CHAF1B	82162,1067
chrX:20285729-20286234	chrX	+	20285728	20286090	True	NM_001173456,NM_004586	chrX,chrX	+,-	PDHA1,RPS6KA3	-923772,-978
chr8:120103508-120104399	chr8	+	120104054	120104305	True	NM_002546,NM_006438	chr8,chr8	-,+	TNFRSF11B,COLEC10	-139671,-24694
chr12:118453696-118454031	chr12	+	118453852	118454017	True	NM_018639,NM_181578,NM_007370,NM_001130113,NM_001130112	chr12,chr12,chr12,chr12,chr12	-,+,+,+,+	WSB2,RFC5,RFC5,RFC5,RFC5	44984,490,490,490,490
chr3:52321030-52321343	chr3	+	52321062	52321228	True	NM_001144951,NR_029677,NM_025222,NR_026701,NR_026700,NR_026702,NM_145262,NR_026699	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,-,-,+,+,+,+,+	GLYCTK,MIR135A1,WDR82,GLYCTK,GLYCTK,GLYCTK,GLYCTK,GLYCTK	607,7146,-8403,607,607,607,607,607
chr19:48216686-48218012	chr19	+	48217104	48217970	True	NM_014601,NM_198479	chr19,chr19	+,-	EHD2,TPRX1	-554,88948
chr4:170680523-170682018	chr4	+	170680522	170681786	True	NM_173872,NM_017867	chr4,chr4	+,-	CLCN3,C4orf27	-138851,-1429
chr11:93451236-93452128	chr11	+	93451459	93451775	True	NR_002569,NR_003028	chr11,chr11	+,-	SCARNA9,SNORA25	2904,12087
chr1:25870536-25870770	chr1	+	25870757	25870819	True	NM_015627,NM_138618	chr1,chr1	+,-	LDLRAP1,RHCE	-732,-123394
chr19:56248909-56250443	chr19	+	56248911	56250135	True	NM_001145014,NM_176820	chr19,chr19	+,-	RFPL4A,NLRP9	20371,-110
chr6:166583820-166585016	chr6	+	166583819	166584960	True	NM_003181,NR_027284	chr6,chr6	-,+	T,LOC441177	-1688,-182831
chr14:93783648-93785444	chr14	+	93783757	93785293	True	NM_020818,NM_001002860	chr14,chr14	+,-	KIAA1409,BTBD7	14271,14142
chr11:77704273-77705293	chr11	+	77704345	77705341	True	NM_003251,NM_033547	chr11,chr11	+,-	THRSP,INTS4	69565,426
chr4:75720013-75720272	chr4	+	75720041	75720236	True	NM_001729,NM_015393	chr4,chr4	-,+	BTC,PARM1	-159,138048
chr9:117348216-117348785	chr9	+	117348223	117348470	True	NM_015404,NM_004888	chr9,chr9	-,+	DFNB31,ATP6V1G1	-80487,1523
chrX:32167354-32168531	chrX	+	32167378	32168566	True	NM_004021,NM_004020,NM_004023,NM_004022,NM_203391,NM_004013	chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,+,-	DMD,DMD,DMD,DMD,GK,DMD	5070,5070,5070,5070,-1495964,5070
chr7:102037896-102038348	chr7	+	102038021	102038117	True	NM_024653,NM_001146210	chr7,chr7	+,-	PRKRIP1,SPDYE6	-1276,-41132
chr1:28764919-28766532	chr1	+	28764987	28766385	True	NM_023923,NR_003077	chr1,chr1	+,-	PHACTR4,SNORD99	-388,139005
chr18:21851186-21851398	chr18	+	21851188	21851334	True	NR_031724,NM_018030	chr18,chr18	+,-	MIR320C2,OSBPL1A	50315,914
chr15:29561201-29561699	chr15	+	29561203	29561651	True	NM_138704,NM_005503	chr15,chr15	-,+	NDNL2,APBA2	416,-347414
chr19:41871056-41871400	chr19	+	41871071	41871317	True	NM_030578,NM_001098825	chr19,chr19	-,+	B9D2,TMEM91	-993,-1251
chr1:46974438-46975029	chr1	+	46974506	46975077	True	NM_147192,NM_001097611,NM_172225	chr1,chr1,chr1	+,-,+	DMBX1,KNCN,DMBX1	-1889,41860,-1889
chr5:177304186-177305077	chr5	+	177304186	177305035	True	NR_003615,NM_173663	chr5,chr5	+,-	LOC728554,FAM153A	-1983,-96681
chr5:177304186-177305077	chr5	-	175392767	175393430	False	NM_032361,NM_001008220	chr5,chr5	-,+	THOC3,CPLX2	2166,-94317
chr3:107575406-107577142	chr3	+	107575748	107577167	True	NR_015414,NR_015394	chr3,chr3	-,+	LOC151658,LOC285205	19798,24884
chr12:49372271-49372968	chr12	+	49372359	49373017	True	NM_003394,NM_005430	chr12,chr12	-,+	WNT10B,WNT1	-6718,-174
chr8:22461394-22462046	chr8	+	22461420	22462076	True	NM_001013842,NM_173686,NR_027715,NM_021174,NR_033902,NM_001198827	chr8,chr8,chr8,chr8,chr8,chr8	+,+,-,+,+,+	C8orf58,C8orf58,FLJ14107,KIAA1967,KIAA1967,C8orf58	-4357,-4357,37696,462,68,-4357
chr17:39038622-39039120	chr17	+	39038651	39038895	True	NM_019010,NM_001195386	chr17,chr17	-,+	KRT20,TMEM99	2652,-63265
chr15:81592478-81592830	chr15	+	81592585	81592847	True	NM_004513,NM_181900	chr15,chr15	+,-	IL16,STARD5	-3383,23727
chr16:21661374-21662398	chr16	+	21661936	21662231	True	NM_144672,NM_005849	chr16,chr16	+,-	OTOA,IGSF6	27603,1798
chr22:24385638-24386124	chr22	+	24385876	24385964	True	NM_001144931,NM_000853	chr22,chr22	+,-	LOC391322,GSTT1	-12817,-1592
chr19:5570854-5571537	chr19	+	5570952	5571187	True	NM_001201338,NR_027064	chr19,chr19	+,-	SAFB,PLAC2	51858,-2947
chr17:8021054-8021258	chr17	+	8021054	8021290	True	NM_001165967,NR_036201,NM_001165960,NM_021628,NM_032580	chr17,chr17,chr17,chr17,chr17	-,+,-,-,-	HES7,MIR4314,ALOXE3,ALOXE3,HES7	6170,-29731,994,620,6170
chr3:195877774-195878013	chr3	+	195877774	195877883	True	NR_034088,NM_001039617	chr3,chr3	+,-	LOC401109,ZDHHC19	-8325,60470
chr15:66794713-66796185	chr15	+	66794934	66796008	True	NM_006049,NM_000968,NR_003105,NR_002440,NR_002441,NR_002442,NR_002443,NM_017975	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,+,-,-,-,-,+	SNAPC5,RPL4,ZWILCH,SNORD16,SNORD18A,SNORD18B,SNORD18C,ZWILCH	-4788,1226,1422,-70,124,-505,-1278,1422
chr22:37307537-37308180	chr22	+	37307536	37308221	True	NM_000395,NM_002854	chr22,chr22	+,-	CSF2RB,PVALB	1453,-92019
chr19:3785061-3785404	chr19	+	3785064	3785284	True	NM_139354,NM_139355,NM_172251	chr19,chr19,chr19	-,-,+	MATK,MATK,MRPL54	1181,1181,-22450
chr10:47134297-47134600	chr10	+	47134297	47134617	True	NR_003277,NM_005972	chr10,chr10	-,+	LOC728643,PPYR1	-461,-50814
chr5:131747350-131747962	chr5	+	131747356	131747904	True	NM_001013717,NR_037898	chr5,chr5	+,-	C5orf56,LOC553103	-734,-41748
chr17:27225824-27227022	chr17	+	27225852	27226713	True	NM_144683,NM_005702,NM_004475	chr17,chr17,chr17	-,+,-	DHRS13,ERAL1,FLOT2	3426,-43860,-1137
chr1:87183263-87184021	chr1	+	87183402	87184068	True	NM_016009,NM_004261	chr1,chr1	+,-	SH3GLB1,SEP15	-13199,196092
chr14:81386161-81388023	chr14	+	81386237	81387789	True	NM_152446,NM_001018036	chr14,chr14	-,+	C14orf145,TSHR	18145,34079
chr5:79551700-79551924	chr5	+	79551812	79551900	True	NM_001174072,NM_178276,NM_001174071,NM_032567	chr5,chr5,chr5,chr5	-,-,-,+	SERINC5,SERINC5,SERINC5,SPZ1	48,48,48,63889
chr20:21496150-21496413	chr20	+	21496349	21496445	True	NM_002509,NM_006192	chr20,chr20	-,+	NKX2-2,PAX1	-1685,189851
chr19:51532849-51533519	chr19	+	51532914	51533370	True	NM_145894,NM_145895,NM_145888,NM_002776,NM_001136032,NM_019598,NM_001077500,NM_001167605,NM_006853,NM_144947,NM_014441	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,-,-,-,+	KLK12,KLK12,KLK10,KLK10,KLK11,KLK12,KLK10,KLK11,KLK11,KLK11,SIGLEC9	4828,4828,-9960,-9632,-3042,4828,-9483,-1624,-1624,-2029,94766
chrX:98081435-98082823	chrX	+	98081470	98082804	True	NM_022144,NR_024608	chrX,chrX	+,-	TNMD,LOC442459	1756985,1112090
chr3:87282525-87283638	chr3	+	87282669	87283582	True	NM_014043,NM_000306	chr3,chr3	+,-	CHMP2B,POU1F1	-6307,42218
chr1:40102231-40102491	chr1	+	40102275	40102535	True	NM_014571,NM_203456	chr1,chr1	-,+	HEYL,PPIE	2865,101981
chr6:89791738-89792870	chr6	+	89791894	89792669	True	NM_006813,NM_080743	chr6,chr6	+,-	PNRC1,SRSF12	-1529,35190
chr2:903187-904511	chr2	+	903197	904067	True	NM_018968,NR_033880	chr2,chr2	+,-	SNTG2,LOC339822	42486,-39085
chrX:151307153-151308157	chrX	+	151307565	151308181	True	NM_001204811,NM_001011550,NM_021048,NM_001011543	chrX,chrX,chrX,chrX	-,+,-,-	MAGEA10-MAGEA5,MAGEA4,MAGEA10,MAGEA10	-540,-220856,-540,-540
chr2:61292963-61293241	chr2	+	61293063	61293167	True	NM_032506,NM_144709,NM_001129993	chr2,chr2,chr2	+,-,+	KIAA1841,PUS10,KIAA1841	195,-47698,-108
chr9:134153402-134153617	chr9	+	134153558	134153654	True	NM_032728,NM_033387	chr9,chr9	+,-	PPAPDC3,FAM78A	11426,-1652
chr10:44096157-44097426	chr10	+	44096315	44096938	True	NM_001099284,NM_145312	chr10,chr10	-,+	ZNF239,ZNF485	-26249,4916
chr11:121323594-121324507	chr11	+	121323638	121324446	True	NR_029671,NM_003105	chr11,chr11	-,+	MIR125B1,SORL1	646156,-777
chr17:33469366-33469707	chr17	+	33469393	33469544	True	NM_173167,NM_001014445,NM_001033576,NM_018096	chr17,chr17,chr17,chr17	+,-,+,-	UNC45B,NLE1,UNC45B,NLE1	5291,-71,5291,-71
chr4:42658487-42658712	chr4	+	42658547	42658679	True	NM_001080476,NM_001105529,NM_006095	chr4,chr4,chr4	+,-,-	GRXCR1,ATP8A1,ATP8A1	236603,493,493
chr8:67965099-67965961	chr8	+	67965102	67965634	True	NM_024790,NM_006837	chr8,chr8	+,-	CSPP1,COPS5	10968,8982
chr5:77653493-77654752	chr5	+	77653713	77654763	True	NM_003664,NM_004866	chr5,chr5	-,+	AP3B1,SCAMP1	-63185,1575
chr2:24569824-24571352	chr2	+	24570170	24571400	True	NM_001040710,NM_006277	chr2,chr2	+,-	C2orf84,ITSN2	-172260,12054
chrX:18443712-18443916	chrX	+	18443712	18443870	True	NR_033717,NM_003159	chrX,chrX	-,+	SCML2,CDKL5	-70868,-38
chr21:46295563-46296204	chr21	+	46295571	46296050	True	NM_058190,NM_004339	chr21,chr21	+,-	C21orf70,PTTG1IP	63904,-1753
chr7:99070134-99070351	chr7	+	99070223	99070375	True	NM_213603,NM_001198879,NM_001003714,NM_001039178,NM_001003713,NM_001013258,NM_004889	chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,-,-,-,-,+,-	ZNF789,ATP5J2-PTCD1,ATP5J2,ATP5J2,ATP5J2,ZNF789,ATP5J2	139,-6399,-6399,-6399,-6399,139,-6399
chrX:49295213-49296538	chrX	+	49295333	49295393	True	NM_001098418,NM_001098408,NM_001098409,NM_001098410,NM_001127199,NM_003785,NM_001127345	chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,-,+	GAGE12E,GAGE12C,GAGE12G,GAGE12H,GAGE12D,PAGE1,GAGE12B	1386,1386,1386,1386,1375,165253,1421
chr10:112401324-112402978	chr10	+	112401446	112402657	True	NR_026932,NM_001134363	chr10,chr10	-,+	LOC282997,RBM20	228067,1497
chr12:122356620-122356830	chr12	+	122356815	122356877	True	NM_001178003,NM_144668,NM_001171993	chr12,chr12,chr12	+,+,-	WDR66,WDR66,HPD	-403,-386,-30298
chrX:74962854-74964248	chrX	+	74963057	74964273	True	NR_030737,NM_016500	chrX,chrX	-,+	TTC3P1,CXorf26	-143,428497
chr1:249151611-249152317	chr1	+	249151636	249152247	True	NM_001193328,NM_001136036,NM_024836	chr1,chr1,chr1	-,-,+	ZNF692,ZNF692,ZNF672	1118,928,-19157
chr3:49057496-49058231	chr3	+	49057609	49058120	True	NM_001009996,NM_199074,NM_199073,NR_029948,NM_199070,NM_000884,NR_029690,NM_018114,NM_199069	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,+,-,+,-,-,-,+	DALRD3,NDUFAF3,NDUFAF3,MIR425,NDUFAF3,IMPDH2,MIR191,DALRD3,NDUFAF3	-1592,142,497,38,953,8805,72,397,953
chr3:137742019-137742640	chr3	+	137742020	137742673	True	NM_016369,NM_001170538	chr3,chr3	+,-	CLDN18,DZIP1L	-13071,89699
chr1:76190727-76192580	chr1	+	76190758	76192452	True	NM_000016,NM_152697,NM_001127328	chr1,chr1,chr1	+,-,+	ACADM,SLC44A5,ACADM	-766,-113959,-766
chr3:61208034-61208411	chr3	+	61208071	61208431	True	NM_002841,NM_001166243	chr3,chr3	+,-	PTPRG,FHIT	338811,28752
chr9:131222550-131223061	chr9	+	131222562	131223088	True	NR_029837,NM_153439,NM_153440,NM_153437,NM_153436,NM_153433,NM_153432,NM_153435,NR_036757,NR_036756,NR_036755,NR_036754	chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,+,+,+,+,+,+,+,+,+,+,+	MIR219-2,ODF2,ODF2,ODF2,ODF2,ODF2,ODF2,ODF2,ODF2,ODF2,ODF2,ODF2	-67569,-4328,-3934,-3427,-5179,-3934,-4328,-4328,-4328,-4328,-4328,-4328
chr19:49560442-49560800	chr19	+	49560562	49560768	True	NM_033183,NM_006179,NM_033043,NM_033142	chr19,chr19,chr19,chr19	-,-,+,-	CGB8,NTF4,CGB5,CGB7	-8194,6406,-13511,-1565
chr20:55842069-55842399	chr20	+	55842222	55842448	True	NM_012444,NM_001719	chr20,chr20	+,-	SPO11,BMP7	62382,-515
chr10:76859834-76860170	chr10	+	76860047	76860165	True	NM_016364,NM_001174156,NM_001007271,NM_001007273,NM_001007272	chr10,chr10,chr10,chr10,chr10	-,+,-,-,-	DUSP13,SAMD8,DUSP13,DUSP13,DUSP13	-799,11227,8855,8855,8855
chr12:50220750-50221005	chr12	+	50220755	50220988	True	NM_001037806,NR_027500,NR_027501,NR_027499	chr12,chr12,chr12,chr12	-,+,+,+	NCKAP5L,LOC100286844,LOC100286844,LOC100286844	1270,1337,1337,1337
chr20:3146802-3147137	chr20	+	3146829	3147003	True	NM_014731,NM_014948,NM_199415,NM_021826,NM_033453	chr20,chr20,chr20,chr20,chr20	-,-,-,-,+	ProSAPiP1,UBOX5,UBOX5,FASTKD5,ITPA	2254,-6289,-6289,-6297,43052
chr22:46067205-46067417	chr22	+	46067212	46067404	True	NM_001167621,NM_148674,NM_013236	chr22,chr22,chr22	+,-,+	ATXN10,SMC1B,ATXN10	273,-257712,273
chr6:121655180-121655664	chr6	+	121655343	121655625	True	NM_152730,NM_000165	chr6,chr6	-,+	C6orf170,GJA1	69,101119
chr12:113377474-113379388	chr12	+	113377537	113379351	True	NM_001193521,NM_006187	chr12,chr12	-,+	RASAL1,OAS3	194258,-1339
chr12:7592057-7592766	chr12	+	7592145	7592805	True	NM_174941,NM_001080454	chr12,chr12	-,+	CD163L1,ACSM4	3994,-135276
chr7:83259557-83261191	chr7	+	83259843	83261008	True	NM_001178129,NM_001127444	chr7,chr7	-,+	SEMA3E,CD36	9790,-2984139
chrY:6297337-6297946	chrY	+	6297360	6297968	True	NR_001535,NR_003590,NR_001536	chrY,chrY,chrY	+,-,-	TTTY21,TTTY2B,TTTY2	13506,-875,-875
chrY:6297337-6297946	chrY	-	9572411	9573019	False	NR_003590,NR_003588,NR_001536	chrY,chrY,chrY	+,-,+	TTTY2B,TTTY21B,TTTY2	875,-13506,875
chr14:103523003-103523246	chr14	+	103523072	103523164	True	NM_001077594,NM_006035	chr14,chr14	+,-	EXOC3L4,CDC42BPB	43316,628
chr13:31514998-31516852	chr13	+	31515122	31516215	True	NM_152325,NM_006644	chr13,chr13	+,-	C13orf26,HSPH1	-8340,219963
chr17:639069-640342	chr17	+	639244	639850	True	NM_015721,NM_024792	chr17,chr17	-,+	GEMIN4,FAM57A	15701,-3456
chr22:30720494-30721324	chr22	+	30720680	30721212	True	NM_001204240,NM_031937,NM_001017437	chr22,chr22,chr22	-,-,+	TBC1D10A,TBC1D10A,CCDC157	1793,1793,31414
chr7:99970186-99970777	chr7	+	99970233	99970405	True	NM_178273,NR_003613,NM_178272,NM_013439	chr7,chr7,chr7,chr7	+,-,+,+	PILRA,PMS2P1,PILRA,PILRA	662,-36303,662,662
chr9:132428480-132428694	chr9	+	132428535	132428710	True	NM_016307,NM_177999	chr9,chr9	+,-	PRRX2,ASB6	-666,-24087
chr16:57439581-57439808	chr16	+	57439585	57439669	True	NM_020313,NM_002987	chr16,chr16	-,+	CIAPIN1,CCL17	41750,-957
chr14:91976238-91976517	chr14	+	91976319	91976515	True	NM_032560,NR_003709	chr14,chr14	-,+	SMEK1,SNORA11B	179,-383600
chr8:79716836-79717041	chr8	+	79716953	79717067	True	NM_001199886,NM_001199887,NM_016010,NM_000880,NM_001199888	chr8,chr8,chr8,chr8,chr8	-,-,+,-,-	IL7,IL7,FAM164A,IL7,IL7	741,741,-138722,741,741
chr7:143083278-143083694	chr7	+	143083389	143083635	True	NM_001010972,NM_003461,NM_005232	chr7,chr7,chr7	+,+,-	ZYX,ZYX,EPHA1	-5080,-5080,22400
chr7:150020779-150021919	chr7	+	150020836	150021543	True	NM_001142928,NM_138434,NM_001164458,NM_023942	chr7,chr7,chr7,chr7	+,+,-,+	LRRC61,C7orf29,ACTR3C,LRRC61	-598,5394,-78,-598
chr9:47165228-47166035	chr9	+	47165512	47165856	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-3534782,-477997
chr9:47165228-47166035	chr9	+	45108390	45108440	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-118205,-1477660
chr9:47165228-47166035	chr9	-	46274879	46274929	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2644149,412636
chr16:9184727-9185045	chr16	+	9184862	9185026	True	NM_003470,NM_014117	chr16,chr16	-,+	USP7,C16orf72	-127521,510
chr21:31588276-31589939	chr21	+	31588434	31589910	True	NM_199328,NM_181599	chr21,chr21	-,+	CLDN8,KRTAP13-1	35,178481
chr7:99689218-99690575	chr7	+	99689326	99690603	True	NM_005916,NM_017715,NR_029831,NR_029498,NM_182776,NR_029510,NM_004722,NM_032924,NM_006833	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,-,+,-,+	MCM7,ZNF3,MIR106B,MIR25,MCM7,MIR93,AP4M1,ZNF3,COPS6	8874,-9955,1144,713,7827,917,8526,-9955,-2794
chr4:20830691-20830921	chr4	+	20830735	20830801	True	NM_147181,NM_145048	chr4,chr4	-,+	KCNIP4,PACRGL	21540,-128756
chr21:35989477-35990223	chr21	+	35989657	35990259	True	NM_004414,NM_203417,NM_053277	chr21,chr21,chr21	-,-,+	RCAN1,RCAN1,CLIC6	-2275,-2912,51428
chr10:95755972-95757718	chr10	+	95756087	95757761	True	NR_002319,NM_016341	chr10,chr10	-,+	PIPSL,PLCE1	-34415,-2392
chr6:110010937-110011658	chr6	+	110011122	110011583	True	NM_145025,NM_001145128,NM_014845	chr6,chr6,chr6	-,-,+	AKD1,AKD1,FIG4	884,884,840
chr8:7286871-7287877	chr8	+	7286958	7287872	True	NM_018661,NM_001040703,NM_001081551	chr8,chr8,chr8	-,+,-	DEFB103B,DEFB105B,DEFB103A	6,57370,48
chr8:7286871-7287877	chr8	-	7738723	7739637	False	NM_152250,NM_018661,NM_001081551	chr8,chr8,chr8	-,+,+	DEFB105A,DEFB103B,DEFB103A	-57363,-6,-48
chr1:166956438-166957533	chr1	+	166956602	166957282	True	NM_199351,NM_032858	chr1,chr1	-,+	ILDR2,MAEL	-12041,1236
chr20:34043223-34043553	chr20	+	34043265	34043559	True	NM_007186,NM_000557	chr20,chr20	+,-	CEP250,GDF5	-93,-17238
chr10:1031988-1032734	chr10	+	1032174	1032576	True	NM_033261,NM_012341	chr10,chr10	-,+	IDI2,GTPBP4	39273,1772
chr5:141257135-141257422	chr5	+	141257138	141257432	True	NM_001142603,NM_032420,NM_002587	chr5,chr5,chr5	+,-,-	KIAA0141,PCDH1,PCDH1	45952,562,562
chr17:46017123-46018003	chr17	+	46017310	46017866	True	NM_024320,NM_018129	chr17,chr17	-,+	PRR15L,PNPO	17294,1022
chr18:32869838-32870102	chr18	+	32869928	32870121	True	NR_024566,NR_024565,NM_001166012,NM_001112734	chr18,chr18,chr18,chr18	+,+,-,-	ZNF271,ZNF271,ZSCAN30,ZSCAN30	114,114,125,125
chrX:43828989-43829308	chrX	+	43829007	43829325	True	NM_000266,NM_000240	chrX,chrX	-,+	NDP,MAOA	3646,-313649
chr17:5343999-5345153	chr17	+	5344095	5345194	True	NR_027685,NM_001212	chr17,chr17	+,-	RPAIN,C1QBP	-21194,-1624
chr9:106761140-106761640	chr9	+	106761150	106761610	True	NM_001042551,NM_001001919	chr9,chr9	+,-	SMC2,OR13C4	94930,527930
chr1:24714799-24715715	chr1	+	24714841	24715639	True	NM_020448,NM_001199013	chr1,chr1	+,-	NIPAL3,C1orf201	26605,24673
chr14:21466339-21467907	chr14	+	21466360	21467888	True	NM_014579,NM_201538,NM_001029991,NR_033419,NM_022734	chr14,chr14,chr14,chr14,chr14	+,-,+,+,+	SLC39A2,NDRG2,METTL17,SLC39A2,METTL17	105,25426,-8453,105,-8453
chr16:74638866-74639178	chr16	+	74638963	74639235	True	NM_002811,NM_001145667,NR_027265,NM_001145666,NR_027264,NM_012201	chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,-,-,-	PSMD7,GLG1,GLG1,GLG1,GLG1,GLG1	-308348,1865,1865,1865,1865,1865
chr3:137728829-137729122	chr3	+	137728838	137728981	True	NM_016369,NM_001170538	chr3,chr3	+,-	CLDN18,DZIP1L	24,103392
chr3:186331607-186332305	chr3	+	186331622	186332344	True	NM_001622,NM_001134415	chr3,chr3	+,-	AHSG,TBCCD1	-823,-43290
chr17:45609270-45609941	chr17	+	45609459	45609733	True	NR_033934,NM_006310	chr17,chr17	-,+	MRPL45P2,NPEPPS	-39473,-1066
chr17:45609270-45609941	chr17	-	36412082	36412142	False	NR_036750,NM_032351	chr17,chr17	-,+	LOC440434,MRPL45	1164,40855
chr7:57507479-57508656	chr7	+	57507792	57508248	True	NR_030766,NM_001159279	chr7,chr7	-,+	LOC642006,ZNF716	-259929,1634
chr14:58908645-58908986	chr14	+	58908731	58908811	True	NM_012460,NM_014749	chr14,chr14	-,+	TIMM9,KIAA0586	-14499,-14075
chr7:135240766-135241412	chr7	+	135240793	135241108	True	NM_015135,NM_001190848	chr7,chr7	+,-	NUP205,CNOT4	1553,-45918
chr20:62614579-62615628	chr20	+	62614616	62615463	True	NM_080621,NM_012469	chr20,chr20	-,+	SAMD10,PRPF6	-3621,-2236
chr10:62750034-62751347	chr10	+	62750167	62751128	True	NM_033379,NR_024554	chr10,chr10	+,-	CDK1,RHOBTB1	-212006,9659
chr15:90775096-90775992	chr15	+	90775118	90775720	True	NM_001013657,NM_006384	chr15,chr15	+,-	C15orf58,CIB1	1766,1609
chr1:220449473-220451437	chr1	+	220449578	220451067	True	NR_001587,NM_018060,NM_012414	chr1,chr1,chr1	-,+,-	AURKAPS1,IARS2,RAB3GAP2	-8521,-182183,-3735
chr1:59043214-59044549	chr1	+	59043250	59044138	True	NM_002353,NR_034014	chr1,chr1	-,+	TACSTD2,LOC100131060	-84,206684
chrX:133119517-133119753	chrX	+	133119530	133119650	True	NM_001164617,NM_001101357,NM_004484,NM_001164619,NM_001164618	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	GPC3,CCDC160,GPC3,GPC3,GPC3	73,251426,73,73,73
chr8:37457128-37457804	chr8	+	37457136	37457846	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	95454,147768
chr15:64996190-64996477	chr15	+	64996208	64996329	True	NM_001195059,NM_002537	chr15,chr15	+,-	PLEKHO2,OAZ2	137752,-746
chr11:117201219-117202814	chr11	+	117201398	117202647	True	NM_014956,NM_138973	chr11,chr11	+,-	CEP164,BACE1	-2878,-14426
chr15:78389314-78390315	chr15	+	78389484	78390340	True	NM_001101404,NM_144572	chr15,chr15	+,-	SH2D7,TBC1D2B	-4609,-19490
chr11:126140851-126142479	chr11	+	126140909	126141823	True	NM_001177842,NR_037648,NM_003139,NM_017547,NR_037647	chr11,chr11,chr11,chr11,chr11	-,+,-,+,+	SRPR,FOXRED1,SRPR,FOXRED1,FOXRED1	-2032,-1920,-2032,-2025,-2025
chr8:72962982-72964579	chr8	+	72963218	72964072	True	NM_007332,NR_033651	chr8,chr8	-,+	TRPA1,LOC100132891	23797,-206920
chr16:4675443-4675711	chr16	+	4675445	4675711	True	NM_001142289,NM_001142291,NM_001142290,NM_015246,NM_145253	chr16,chr16,chr16,chr16,chr16	+,+,+,+,-	MGRN1,MGRN1,MGRN1,MGRN1,FAM100A	-670,-670,-670,-670,-10518
chr16:2204020-2204505	chr16	+	2204042	2204334	True	NR_002736,NM_014353,NM_032271	chr16,chr16,chr16	-,+,+	SNORD60,RAB26,TRAF7	822,-5442,1464
chr3:192127961-192128194	chr3	+	192128100	192128168	True	NM_020386,NM_021032	chr3,chr3	+,-	HRASLS,FGF12	830749,-1262
chr22:35546620-35547117	chr22	+	35546705	35547069	True	NM_001008494,NM_005368	chr22,chr22	+,-	ISX,MB	-84626,466365
chr6:154642768-154643892	chr6	+	154642968	154643695	True	NM_001130699,NM_001145287	chr6,chr6	-,+	IPCEF1,OPRM1	7571,-235377
chr3:187006613-187006855	chr3	+	187006715	187006903	True	NM_001879,NM_139125,NR_033519,NM_022147,NM_001031849	chr3,chr3,chr3,chr3,chr3	-,-,-,+,-	MASP1,MASP1,MASP1,RTP4,MASP1	2957,2957,2957,79264,2957
chr12:123214584-123214906	chr12	+	123214634	123214770	True	NM_032554,NM_003677	chr12,chr12	-,+	GPR81,DENR	409,22600
chr7:76141379-76141635	chr7	+	76141510	76141586	True	NM_030570,NR_003262,NM_182684	chr7,chr7,chr7	+,-,+	UPK3B,FDPSL2A,UPK3B	-1816,-37193,-1816
chr7:76141379-76141635	chr7	+	76635404	76635480	False	NR_023383,NM_006682	chr7,chr7	+,-	PMS2P11,FGL2	-25316,193720
chr9:131133942-131134758	chr9	+	131133990	131134646	True	NR_029837,NM_030914,NM_001135947	chr9,chr9,chr9	-,+,+	MIR219-2,URM1,URM1	20397,-443,-443
chr1:170135685-170136663	chr1	+	170135690	170136658	True	NR_036065,NR_036064	chr1,chr1	+,-	MIR3119-2,MIR3119-1	-15222,-15087
chr1:182573089-182573651	chr1	+	182573199	182573697	True	NR_036490,NM_002928	chr1,chr1	+,-	LOC284648,RGS16	10577,45
chr3:148852811-148854091	chr3	+	148852817	148853820	True	NM_032383,NM_139048	chr3,chr3	+,-	HPS3,HLTF	-5497,-48476
chr22:44350973-44351236	chr22	+	44351024	44351276	True	NM_138814,NM_015380	chr22,chr22	-,+	PNPLA5,SAMM50	-63131,-16
chr6:158592033-158593485	chr6	+	158592075	158592795	True	NM_207118,NM_032861	chr6,chr6	+,-	GTF2H5,SERAC1	-2749,-2763
chr1:110305681-110306242	chr1	+	110305683	110305967	True	NM_139053,NM_000851,NM_133181,NM_024526	chr1,chr1,chr1,chr1	-,+,-,-	EPS8L3,GSTM5,EPS8L3,EPS8L3	727,-50870,727,727
chr12:118811044-118811718	chr12	+	118811135	118811758	True	NM_022491,NM_016281	chr12,chr12	+,-	SUDS3,TAOK3	2599,-385
chr6:167536669-167537136	chr6	+	167536809	167537155	True	NM_005299,NM_031409	chr6,chr6	-,+	GPR31,CCR6	34214,-622
chr20:56098880-56099191	chr20	+	56098952	56099239	True	NM_002591,NM_080618	chr20,chr20	+,-	PCK1,CTCFL	36897,966
chr6:74164185-74164574	chr6	+	74164348	74164472	True	NM_001123226,NM_012123,NM_133645,NM_138441	chr6,chr6,chr6,chr6	+,+,+,-	MTO1,MTO1,MTO1,MB21D1	6981,6981,6981,-2305
chr17:6947383-6947669	chr17	+	6947562	6947626	True	NM_201566,NM_153357	chr17,chr17	+,-	SLC16A13,SLC16A11	-8219,-320
chr17:37122058-37122545	chr17	+	37122332	37122467	True	NR_033753,NM_001008777	chr17,chr17	+,-	FLJ43826,FBXO47	63691,1239
chr5:1546046-1546916	chr5	+	1546084	1546697	True	NM_024830,NM_004553	chr5,chr5	-,+	LPCAT1,NDUFS6	-22008,254798
chr3:121266092-121266805	chr3	+	121266291	121266742	True	NM_199420,NM_001012659	chr3,chr3	-,+	POLQ,ARGFX	-1438,20035
chr11:63269904-63270786	chr11	+	63270129	63270787	True	NM_001142536,NM_001142537,NM_001142535,NM_033101,NM_001142538,NM_054108	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,-	LGALS12,LGALS12,LGALS12,LGALS12,LGALS12,HRASLS5	2736,4671,2736,2736,4671,-11449
chr10:21437748-21438066	chr10	+	21437838	21438092	True	NM_001177483,NM_001010896,NM_001195627	chr10,chr10,chr10	-,-,+	C10orf113,C10orf113,MLLT10	-2350,-2350,385008
chr17:27920995-27921700	chr17	+	27921067	27921619	True	NM_014030,NM_001085454,NM_152345	chr17,chr17,chr17	-,-,+	GIT1,GIT1,ANKRD13B	-4457,-4457,-591
chr22:26987289-26988823	chr22	+	26987975	26988863	True	NM_003595,NM_001886	chr22,chr22	-,+	TPST2,CRYBA4	-1886,29064
chr4:83351971-83352345	chr4	+	83352119	83352349	True	NR_003249,NM_031372,NM_021204	chr4,chr4,chr4	-,-,+	HNRPDL,HNRPDL,ENOPH1	-741,-741,-444
chr9:109625196-109625500	chr9	+	109625195	109625545	True	NR_031752,NM_021224	chr9,chr9	-,+	MIR548Q,ZNF462	223221,-80
chr1:150691654-150692480	chr1	+	150691825	150692366	True	NM_001199829,NM_032132,NR_036211	chr1,chr1,chr1	-,-,+	HORMAD1,HORMAD1,MIR4257	1056,1056,-167476
chr17:75143333-75145053	chr17	+	75143345	75144852	True	NR_036200,NM_001039573,NM_003003,NM_001143999,NM_001143998	chr17,chr17,chr17,chr17,chr17	-,+,+,+,+	MIR4316,SEC14L1,SEC14L1,SEC14L1,SEC14L1	248334,-6402,-6402,-6402,-6402
chr16:3163119-3163482	chr16	+	3163184	3163431	True	NM_001042428,NR_024167,NR_024166,NM_003456	chr16,chr16,chr16,chr16	+,-,-,+	ZNF205,MGC3771,MGC3771,ZNF205	-672,2225,2225,-672
chr11:32459598-32460361	chr11	+	32459680	32460380	True	NM_024426,NM_001198551,NM_024424,NR_023920,NM_000378,NM_001198552	chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,+,-,-	WT1,WT1,WT1,WT1-AS,WT1,WT1	-2599,-7317,-2599,-2446,-2599,-7317
chr19:48776524-48776745	chr19	+	48776527	48776765	True	NM_001184904,NM_153608	chr19,chr19	-,+	CARD8,ZNF114	-17324,-1924
chr12:58118258-58119141	chr12	+	58118291	58119034	True	NM_001122772,NR_027032	chr12,chr12	-,+	AGAP2,LOC100130776	13052,988
chr3:142149644-142151122	chr3	+	142149737	142150193	True	NM_001145319,NM_001042604	chr3,chr3	+,-	PLS1,XRN1	165035,16710
chr6:33424244-33425627	chr6	+	33424281	33425515	True	NM_152735,NM_015921	chr6,chr6	+,-	ZBTB9,CUTA	-1976,-38216
chr6:33424244-33425627	chr6_ssto_hap7	+	4904525	4905759	False	NM_001014840	chr6_ssto_hap7	-	CUTA	-38214
chrX:14041789-14043753	chrX	+	14041971	14043778	True	NM_001042480,NM_003611,NM_001042479,NM_017856	chrX,chrX,chrX,chrX	-,+,-,-	GEMIN8,OFD1,GEMIN8,GEMIN8	4317,-289198,4317,4317
chr9:46210396-46211566	chr9	+	46210535	46211402	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2579805,476163
chr9:46210396-46211566	chr9	-	67702287	67702671	False	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	91568,224089
chr9:46210396-46211566	chr9	+	45089471	45089855	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-99286,-1458741
chr9:46210396-46211566	chr9	-	46293363	46293733	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2662633,393832
chr18:56346939-56348009	chr18	+	56347312	56347882	True	NM_006785,NM_052947,NM_173844	chr18,chr18,chr18	+,-,+	MALT1,ALPK2,MALT1	-8745,-51123,-8745
chrX:73052268-73053248	chrX	+	73052341	73053271	True	NR_001564,NR_003255	chrX,chrX	-,+	XIST,TSIX	19367,-40361
chrX:24071968-24072432	chrX	+	24072004	24072422	True	NM_030624,NM_001415	chrX,chrX	-,+	KLHL15,EIF2S3	-26701,642
chr7:151329755-151330228	chr7	+	151329834	151330200	True	NR_034013,NM_024429	chr7,chr7	+,-	LOC100131176,PRKAG2	-223564,-490
chr1:201854315-201855163	chr1	+	201854383	201855059	True	NM_198149,NM_012134,NR_030775	chr1,chr1,chr1	+,-,+	SHISA4,LMOD1,SHISA4	2745,60707,2737
chr11:60555412-60556452	chr11	+	60555661	60556423	True	NM_206893,NM_004778	chr11,chr11	+,-	MS4A10,GPR44	-2891,67071
chr14:95050533-95050845	chr14	+	95050535	95050803	True	NM_173850,NM_000624	chr14,chr14	-,+	SERPINA12,SERPINA5	-66354,-2855
chr17:79979717-79980248	chr17	+	79979781	79980237	True	NM_005052,NM_144998,NM_144999	chr17,chr17,chr17	+,-,+	RAC3,STRA13,LRRC45	9294,586,1042
chr15:81436158-81436791	chr15	+	81436166	81436640	True	NM_015154,NM_173528	chr15,chr15	-,+	MESDC2,C15orf26	-153961,-9573
chr22:21356672-21356948	chr22	+	21356769	21356916	True	NR_027051,NM_030573,NR_027052,NM_001008695	chr22,chr22,chr22,chr22	+,-,+,-	FLJ39582,THAP7,FLJ39582,THAP7	-609,-365,-609,-365
chr11:106884364-106884905	chr11	+	106884472	106884698	True	NM_001130037,NM_000855	chr11,chr11	+,-	ELMOD1,GUCY1A2	577118,4537
chr19:12833901-12834603	chr19	+	12834029	12834625	True	NM_001136196,NM_001136195,NM_004317,NM_013433	chr19,chr19,chr19,chr19	-,-,+,-	TNPO2,TNPO2,ASNA1,TNPO2	-567,235,13680,-924
chr8:48173027-48173328	chr8	+	48173085	48173227	True	NM_005195,NM_001080394	chr8,chr8	-,+	CEBPD,KIAA0146	477549,314
chr1:1626994-1627926	chr1	+	1627772	1627863	True	NR_002946,NM_001110781	chr1,chr1	+,-	MMP23A,SLC35E2B	3514,-3529
chr9:116207568-116208224	chr9	+	116207786	116207920	True	NM_144488,NM_017443	chr9,chr9	+,-	RGS3,POLE3	-826,-34757
chr7:50513085-50513317	chr7	+	50513086	50513354	True	NM_001042762,NM_022116,NR_033845	chr7,chr7,chr7	-,-,+	FIGNL1,FIGNL1,LOC100129427	4784,4784,86102
chrX:114524014-114524847	chrX	+	114524014	114524875	True	NM_016383,NM_020871	chrX,chrX	+,-	LUZP4,LRCH2	44,-55379
chr2:2319874-2320882	chr2	+	2319891	2320927	True	NR_024468,NM_015025	chr2,chr2	+,-	LOC730811,MYT1L	2076,14168
chr1:153916826-153917541	chr1	+	153917112	153917538	True	NM_130898,NM_014856	chr1,chr1	+,-	CREB3L4,DENND4B	22858,1666
chr3:8544586-8546383	chr3	+	8544651	8546359	True	NM_014583,NR_033378	chr3,chr3	+,-	LMCD1,LOC100288428	-1191,-1307
chr2:37897720-37898141	chr2	+	37897803	37898158	True	NM_006449,NM_001170791	chr2,chr2	-,+	CDC42EP3,FAM82A1	1218,254303
chrX:21875070-21875396	chrX	+	21875115	21875421	True	NM_014332,NM_206923	chrX,chrX	-,+	SMPX,YY2	-98885,-1061
chr17:66508319-66508565	chr17	+	66508364	66508606	True	NR_027751,NM_212472,NM_212471,NM_002734	chr17,chr17,chr17,chr17	-,+,+,+	FAM20A,PRKAR1A,PRKAR1A,PRKAR1A	46012,4,-305,4
chr5:180335498-180337077	chr5	+	180335762	180336902	True	NM_001159710,NM_024850,NM_001040462,NM_001159709,NM_001159708,NM_001159707,NM_152283	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,-	BTNL8,BTNL8,BTNL8,BTNL8,BTNL8,BTNL8,ZFP62	-1,-9736,-9736,-9736,-9736,-9736,-47476
chr12:4383233-4383441	chr12	+	4383287	4383379	True	NM_001759,NM_020638	chr12,chr12	+,-	CCND2,FGF23	-436,105565
chr21:45721935-45722493	chr21	+	45722049	45722503	True	NR_024108,NM_002626,NM_004928	chr21,chr21,chr21	+,+,-	PFKL,PFKL,C21orf2	-2175,-2170,36832
chr15:41138419-41138831	chr15	+	41138530	41138834	True	NM_017726,NM_003710,NM_181642,NM_001032367	chr15,chr15,chr15,chr15	-,+,+,+	PPP1R14D,SPINT1,SPINT1,SPINT1	-17623,-2335,-2335,-1938
chr1:232648825-232650531	chr1	+	232648828	232650514	True	NM_020808,NM_019090	chr1,chr1	-,+	SIPA1L2,KIAA1383	779,290123
chr16:55513503-55514129	chr16	+	55513540	55514152	True	NM_001127891,NM_001025194,NM_004530	chr16,chr16,chr16	+,-,+	MMP2,CES1,MMP2	1321,352973,-510
chr21:45588746-45589520	chr21	+	45588927	45589315	True	NM_198155,NM_015259	chr21,chr21	+,-	C21orf33,ICOSLG	-35484,71569
chr10:74859772-74861067	chr10	+	74859957	74860865	True	NM_001142595,NM_001017962,NM_001142596,NM_000917,NM_015901	chr10,chr10,chr10,chr10,chr10	-,-,-,-,+	P4HA1,P4HA1,P4HA1,P4HA1,NUDT13	-3225,-3225,-3225,-3225,9344
chr5:157099299-157099735	chr5	+	157099418	157099773	True	NM_001145132,NM_178424	chr5,chr5	+,-	C5orf52,SOX30	-908,-19990
chr10:100205525-100205828	chr10	+	100205542	100205869	True	NM_182639,NM_014472,NM_000195	chr10,chr10,chr10	-,+,-	HPS1,C10orf28,HPS1	896,-311212,896
chr4:74904534-74904845	chr4	+	74904645	74904893	True	NM_001144978,NM_002090	chr4,chr4	+,-	MTHFD2L,CXCL3	118935,-155
chr5:114726391-114727399	chr5	+	114726445	114727429	True	NM_001284,NM_001040440	chr5,chr5	+,-	AP3S1,CCDC112	450189,-93987
chr13:114053690-114054284	chr13	+	114053868	114054230	True	NM_024719,NM_017905	chr13,chr13	-,+	GRTP1,TMCO3	-35405,91077
chr19:21685060-21686886	chr19	+	21685059	21686573	True	NM_001001415,NM_021269	chr19,chr19	+,-	ZNF429,ZNF708	1863,-172847
chr12:100877684-100879469	chr12	+	100877946	100879063	True	NM_152317,NM_005123	chr12,chr12	-,+	DEPDC4,NR1H4	-217089,-10331
chr7:127252297-127253449	chr7	+	127252561	127253401	True	NM_006193,NM_020369	chr7,chr7	-,+	PAX4,FSCN3	2433,-18923
chr1:204122962-204123741	chr1	+	204123030	204123782	True	NM_018208,NM_005686	chr1,chr1	-,+	ETNK2,SOX13	-1723,-80835
chr3:49212241-49213155	chr3	+	49212339	49213081	True	NM_173546,NM_022903	chr3,chr3	+,-	KLHDC8B,CCDC71	-3372,-8554
chr19:49993875-49994263	chr19	+	49993878	49994210	True	NR_001285,NR_000020,NR_026712,NR_000021,NM_012423,NR_000019,NR_000018,NM_001015,NR_029703	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,+,+,+,-	SNORD35B,SNORD33,RPL13AP5,SNORD32A,RPL13A,SNORD34,SNORD35A,RPS11,MIR150	6765,-55,-3064,-706,-3064,-33,221,5423,9965
chr15:44826873-44827527	chr15	+	44826875	44827258	True	NR_034171,NR_034170,NM_003758	chr15,chr15,chr15	-,-,+	LOC645212,LOC645212,EIF3J	1895,1918,2007
chr21:43300963-43301659	chr21	+	43301146	43301690	True	NM_022115,NR_027273,NM_001040424	chr21,chr21,chr21	-,+,-	PRDM15,C21orf121,PRDM15	-1555,140422,-1564
chr3:48699577-48699779	chr3	+	48699607	48699739	True	NM_033629,NM_001407	chr3,chr3	+,-	TREX1,CELSR3	-192429,659
chr12:76950731-76952676	chr12	+	76950798	76952553	True	NM_020841,NM_001003712,NM_015336	chr12,chr12,chr12	-,-,+	OSBPL8,OSBPL8,ZDHHC17	1086,1086,205300
chr9:134002026-134002558	chr9	+	134002332	134002432	True	NM_005085,NM_033387	chr9,chr9	+,-	NUP214,FAM78A	-1409,149526
chr16:75570874-75571676	chr16	+	75571247	75571724	True	NM_024533,NM_007285	chr16,chr16	-,+	CHST5,GABARAPL2	-2179,28524
chr19:54567535-54568009	chr19	+	54567651	54567711	True	NM_198481,NM_004542	chr19,chr19	-,+	VSTM1,NDUFA3	-444,38448
chr17:48279108-48280255	chr17	+	48279471	48280300	True	NM_001135697,NM_000088	chr17,chr17	+,-	SGCA,COL1A1	-36156,-471
chr14:96969218-96969447	chr14	+	96969241	96969458	True	NM_018036,NM_032632	chr14,chr14	-,+	ATG2B,PAPOLA	-139563,-573
chr2:43020541-43020800	chr2	+	43020668	43020850	True	NM_020744,NM_012205	chr2,chr2	+,-	MTA3,HAAO	-225048,-917
chr18:77725219-77726022	chr18	+	77725308	77725915	True	NM_001136180,NM_025078	chr18,chr18	+,-	HSBP1L1,PQLC1	-777,-13655
chr2:133034636-133035065	chr2	+	133034676	133035061	True	NM_001508,NR_027020	chr2,chr2	+,-	GPR39,ANKRD30BL	139085,-19134
chr16:32164555-32165279	chr16	+	32164945	32165199	True	NR_002827,NM_003414	chr16,chr16	-,+	HERC2P4,ZNF267	-1071,-279917
chr16:32164555-32165279	chr16	-	32785036	32785174	False	NM_016212	chr16	-	TP53TG3	-96983
chr16:32164555-32165279	chr16	+	33107868	33108006	False	NR_033866,NM_016212	chr16,chr16	-,+	LOC390705,TP53TG3	190746,96973
chr6:109762583-109762825	chr6	+	109762596	109762866	True	NM_173672,NM_003080,NM_001111298	chr6,chr6,chr6	-,+,-	PPIL6,SMPD2,PPIL6	-222,-716,-222
chr5:41057325-41057817	chr5	+	41057342	41057606	True	NM_000587,NM_173489	chr5,chr5	+,-	C7,HEATR7B2	-147802,13890
chr15:65363804-65364117	chr15	+	65364040	65364138	True	NM_016563,NM_001101362	chr15,chr15	-,+	RASL12,KBTBD13	-3652,5015
chr22:44581718-44582025	chr22	+	44581730	44581980	True	NR_024426,NM_001099294,NM_001137606,NM_022141,NR_024428	chr22,chr22,chr22,chr22,chr22	+,-,+,+,+	PARVG,KIAA1644,PARVG,PARVG,PARVG	-5011,126801,-4524,-5011,-4565
chr1:231297251-231297878	chr1	+	231297283	231297763	True	NM_152379,NM_001004342	chr1,chr1	-,+	C1orf131,TRIM67	79211,910
chr11:750010-750544	chr11	+	750094	750554	True	NM_006755,NM_182612	chr11,chr11	+,-	TALDO1,PDDC1	-2713,26987
chr7:72440534-72440872	chr7	+	72440542	72440694	True	NR_033323,NR_003602	chr7,chr7	-,+	NSUN5P2,LOC541473	-15240,-401
chr7:72440534-72440872	chr7	-	75024202	75024354	False	NM_198853,NM_198924,NR_003614	chr7,chr7,chr7	+,+,-	TRIM74,TRIM73,PMS2L2	548,548,-35987
chr7:72440534-72440872	chr7	+	72742632	72742776	False	NM_001135211,NM_003602,NM_178125	chr7,chr7,chr7	+,+,-	FKBP6,FKBP6,TRIM50	-528,-383,-547
chr16:1758285-1759195	chr16	+	1758429	1759235	True	NM_002513,NM_015133,NM_001040439	chr16,chr16,chr16	-,+,+	NME3,MAPK8IP3,MAPK8IP3	62525,-2260,-2260
chr4:110651900-110653733	chr4	+	110652186	110653670	True	NM_018983,NM_030821	chr4,chr4	+,-	GAR1,PLA2G12A	82995,-944
chr4:175440747-175441112	chr4	+	175440833	175441162	True	NM_000860,NR_036236,NR_027332,NM_001145816	chr4,chr4,chr4,chr4	-,+,-,-	HPGD,MIR4276,HPGD,HPGD	2681,-95938,2933,2681
chr1:60521770-60522331	chr1	+	60521991	60522389	True	NM_015888,NM_152377	chr1,chr1	+,-	HOOK1,C1orf87	-241516,17114
chr3:179281662-179282955	chr3	+	179281678	179282911	True	NM_177989,NM_020409,NM_004301,NM_178042	chr3,chr3,chr3,chr3	+,-,+,+	ACTL6A,MRPL47,ACTL6A,ACTL6A	-1021,39592,-1021,-1021
chr2:101619882-101621155	chr2	+	101619969	101620913	True	NM_001098577,NM_000993,NM_001099693,NM_001102426	chr2,chr2,chr2,chr2	+,+,+,-	RPL31,RPL31,RPL31,TBC1D8	-1342,-1342,-1342,146983
chr2:174222127-174222648	chr2	+	174222131	174222650	True	NM_031942,NM_145810,NR_033882	chr2,chr2,chr2	+,+,-	CDCA7,CDCA7,LOC339751	-2628,-2628,-75367
chr2:202691105-202692542	chr2	+	202691208	202692574	True	NM_001135745,NM_139158	chr2,chr2	-,+	ALS2,CDK15	-45313,-20068
chrX:3630617-3630908	chrX	+	3630663	3630921	True	NM_005044,NM_004042	chrX,chrX	-,+	PRKX,ARSF	804,-645874
chr1:57431584-57432414	chr1	+	57431620	57432298	True	NM_000562,NM_000066	chr1,chr1	+,-	C8A,C8B	-111228,68
chr18:53571621-53573451	chr18	+	53571760	53573467	True	NM_003199,NM_015285	chr18,chr18	-,+	TCF4,WDR7	-315900,745148
chr7:76055001-76055791	chr7	+	76055445	76055839	True	NM_080744,NM_001110354	chr7,chr7	-,+	SRCRB4D,ZP3	-16433,-1224
chr10:104154618-104154913	chr10	+	104154646	104154832	True	NM_001077493,NM_002502,NM_002779,NM_001077494	chr10,chr10,chr10,chr10	+,+,-,+	NFKB2,NFKB2,PSD,NFKB2	-468,599,24119,-358
chr10:120355481-120355754	chr10	+	120355551	120355773	True	NM_004248,NM_199461	chr10,chr10	-,+	PRLHR,NANOS1	-391,433454
chr17:7310582-7311635	chr17	+	7310752	7311284	True	NM_020795,NR_037719,NM_152766	chr17,chr17,chr17	+,-,-	NLGN2,C17orf61-PLSCR3,C17orf61	217,-3302,-3302
chr9:77643566-77643936	chr9	+	77643567	77643729	True	NM_012383,NM_152420	chr9,chr9	+,-	OSTF1,C9orf41	59668,-257
chr12:53718061-53718393	chr12	+	53718145	53718433	True	NM_021640,NM_001173466,NM_015665	chr12,chr12,chr12	+,-,-	C12orf10,AAAS,AAAS	-24726,-2733,-2733
chr21:9969639-9970418	chr21	+	9969810	9970392	True	NM_001033515,NR_037458	chr21,chr21	-,+	LOC100132288,MIR3687	-1225,-143658
chr10:15131439-15132578	chr10	+	15131865	15132625	True	NM_183005,NM_001097590,NM_006414,NM_001039844,NM_153244	chr10,chr10,chr10,chr10,chr10	+,+,+,-,-	RPP38,RPP38,RPP38,ACBD7,C10orf111	6556,6556,6556,-1090,6743
chr1:31888149-31888819	chr1	+	31888179	31888723	True	NM_001199039,NM_001199038,NM_018565,NM_001199037,NM_178865,NM_004102	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-	SERINC2,SERINC2,SERINC2,SERINC2,SERINC2,FABP3	-1570,-5818,-1570,-5209,-2267,-42256
chrY:21904449-21906374	chrY	+	21905037	21906355	True	NM_032576,NM_001146705,NM_004653,NM_001146706	chrY,chrY,chrY,chrY	+,-,-,-	CYorf15B,KDM5D,KDM5D,KDM5D	-146646,520,520,520
chr15:52157070-52158371	chr15	+	52157472	52158378	True	NM_014547,NM_138792	chr15,chr15	+,-	TMOD3,LEO1	-35706,105636
chr19:45283021-45283820	chr19	+	45283119	45283382	True	NM_012116,NR_027754,NM_001130852	chr19,chr19,chr19	+,-,+	CBLC,CEACAM22P,CBLC	-2050,-222969,-2050
chr2:70074358-70075990	chr2	+	70074358	70076023	True	NM_178439,NM_152792	chr2,chr2	+,-	GMCL1,ASPRV1	-17593,113424
chr12:7463186-7464376	chr12	+	7463239	7464195	True	NM_174941,NM_001080454	chr12,chr12	-,+	CD163L1,ACSM4	132604,-6362
chr20:44485241-44485741	chr20	+	44485324	44485740	True	NM_005469,NR_037628,NM_080752	chr20,chr20,chr20	-,+,+	ACOT8,ZSWIM3,ZSWIM3	358,479,479
chr14:102425352-102426335	chr14	+	102425868	102426016	True	NM_001376,NM_005348	chr14,chr14	+,-	DYNC1H1,HSP90AA1	4848,127546
chr12:108906864-108907947	chr12	+	108907269	108907845	True	NM_007076,NM_014706	chr12,chr12	+,-	FICD,SART3	1205,47370
chr19:3627223-3627761	chr19	+	3627279	3627749	True	NM_021231,NM_001080543,NM_133261	chr19,chr19,chr19	-,-,+	C19orf29,C19orf29,GIPC3	-466,-466,-41761
chr12:50479583-50481187	chr12	+	50479620	50481000	True	NM_003076,NM_139071,NM_013277	chr12,chr12,chr12	+,+,-	SMARCD1,SMARCD1,RACGAP1	-690,-690,-60313
chr2:231791251-231791495	chr2	+	231791299	231791405	True	NM_030926,NM_005683	chr2,chr2	+,-	ITM2C,GPR55	-61729,-1358
chr16:48422831-48424081	chr16	+	48423147	48423995	True	NM_003031,NM_031490	chr16,chr16	-,+	SIAH1,LONP2	-3918,-144994
chr19:10541574-10542157	chr19	+	10541687	10542189	True	NM_007065,NM_001111309,NM_001111308	chr19,chr19,chr19	-,+,+	CDC37,PDE4A,PDE4A	-27416,921,-217
chr8:145134478-145134847	chr8	+	145134482	145134710	True	NM_003801,NM_017570,NM_019037	chr8,chr8,chr8	+,-,+	GPAA1,OPLAH,EXOSC4	2813,-18898,-1014
chr1:36612056-36613781	chr1	+	36612284	36613787	True	NM_014408,NM_018067	chr1,chr1	-,+	TRAPPC3,MAP7D1	1331,8015
chr11:57312603-57313000	chr11	+	57312612	57312774	True	NM_012456,NM_001105565	chr11,chr11	-,+	TIMM10,SMTNL1	-14380,-2549
chr11:118827080-118827527	chr11	+	118827182	118827542	True	NM_006760,NM_182557	chr11,chr11	+,-	UPK2,BCL9L	-225,-45569
chr1:249123172-249123699	chr1	+	249123172	249123458	True	NM_024836,NR_036070,NM_030645	chr1,chr1,chr1	+,+,-	ZNF672,MIR3124,SH3BP5L	9071,-2655,-3018
chr6:134498274-134499187	chr6	+	134498513	134499196	True	NM_004865,NM_001143678,NM_005627,NM_001143677	chr6,chr6,chr6,chr6	+,-,-,-	TBPL1,SGK1,SGK1,SGK1	-224263,-1443,-2479,-15
chr9:139220192-139220530	chr9	+	139220199	139220567	True	NM_015597,NM_001145638,NR_026964	chr9,chr9,chr9	+,+,-	GPSM1,GPSM1,LOC26102	1364,1364,1262
chr3:11193484-11195315	chr3	+	11193953	11195329	True	NM_001098212,NR_027102	chr3,chr3	+,-	HRH1,LOC285370	884,-388076
chr9:36281774-36282492	chr9	+	36281880	36282532	True	NM_001128227,NM_001190388,NM_007096	chr9,chr9,chr9	-,-,+	GNE,GNE,CLTA	-4827,-4827,-91079
chrX:72164215-72164855	chrX	+	72164287	72164673	True	NR_034116,NR_026594,NR_026595	chrX,chrX,chrX	+,-,-	LOC100129407,NCRNA00246B,NCRNA00246	-6346,-698,-698
chrX:72164215-72164855	chrX	-	71995818	71996204	False	NR_034116,NM_001080851	chrX,chrX	-,+	LOC100129407,DMRTC1B	6341,68671
chr7:21587053-21588840	chr7	+	21587251	21588877	True	NM_003777,NM_001127370	chr7,chr7	+,-	DNAH11,CDCA7L	-4476,396715
chr15:66994748-66995251	chr15	+	66994840	66995262	True	NM_005585,NR_027654,NM_207338,NM_001142861	chr15,chr15,chr15,chr15	+,+,-,+	SMAD6,SMAD6,LCTL,SMAD6	-217,-217,-137005,5667
chr11:62357034-62357828	chr11	+	62357158	62357683	True	NM_022830,NM_000327	chr11,chr11	-,+	TUT1,ROM1	1477,22529
chr4:96469278-96470024	chr4	+	96469350	96469812	True	NM_005390,NM_003728	chr4,chr4	+,-	PDHA2,UNC5C	291426,599
chr10:29187026-29188441	chr10	+	29187105	29188477	True	NR_033805,NM_012342	chr10,chr10	-,+	LOC220906,BAMBI	-365822,-220739
chr2:107084630-107084851	chr2	+	107084733	107084899	True	NM_001144013,NR_003506	chr2,chr2	-,+	RGPD3,PLGLA	-4,-82015
chr2:107084630-107084851	chr2	-	108443317	108443367	False	NM_182588,NR_024439	chr2,chr2	+,-	RGPD4,LOC729121	20,-734
chr1:154543049-154543923	chr1	+	154543207	154543859	True	NM_000748,NM_017582	chr1,chr1	+,-	CHRNB2,UBE2Q1	-3001,-12087
chr2:88665473-88666293	chr2	+	88665833	88666296	True	NM_152670,NM_001135649	chr2,chr2	+,-	C2orf51,FOXI3	157872,85807
chr4:52892716-52894469	chr4	+	52893029	52894482	True	NM_145263,NM_001024611,NM_000232	chr4,chr4,chr4	+,-,-	SPATA18,LRRC66,SGCB	23110,-9243,10061
chr11:118663566-118663871	chr11	+	118663624	118663881	True	NM_001716,NM_004397	chr11,chr11	+,-	CXCR5,DDX6	90659,-1652
chr16:31574809-31575773	chr16	+	31575176	31575741	True	NR_027011,NM_016633	chr16,chr16	-,+	CSDAP1,AHSP	5155,-36029
chr19:18046014-18046320	chr19	+	18046019	18046228	True	NM_001136203,NM_138442,NM_000215	chr19,chr19,chr19	+,+,-	CCDC124,CCDC124,JAK3	-2246,-165,-87178
chr8:124286812-124287168	chr8	+	124286946	124287098	True	NR_037874,NR_037873,NM_001204180,NM_007222,NM_207006,NM_001017926	chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,+,-	ZHX1,ZHX1,ZHX1-C8ORF76,ZHX1,FAM83A,ZHX1	-219,733,-219,-219,-92245,-219
chr3:112204818-112206147	chr3	+	112205084	112206157	True	NM_017945,NM_001085357	chr3,chr3	+,-	SLC35A5,BTLA	74737,12302
chr20:32898158-32898854	chr20	+	32898264	32898575	True	NM_001672,NM_001161766,NM_000687	chr20,chr20,chr20	+,-,-	ASIP,AHCY,AHCY	-50150,1084,-7049
chr8:61590395-61590635	chr8	+	61590408	61590666	True	NR_034003,NM_017780	chr8,chr8	-,+	LOC100130298,CHD7	289691,672
chr10:124712890-124713301	chr10	+	124712942	124713228	True	NM_153336,NM_024942	chr10,chr10	+,-	PSTK,C10orf88	26327,741
chr3:197274710-197276407	chr3	+	197274773	197276125	True	NM_203314,NM_004051,NM_001011537	chr3,chr3,chr3	-,-,+	BDH1,BDH1,FYTTD1	6791,6791,200298
chr16:831597-832253	chr16	+	831872	832264	True	NM_001025190,NM_058192,NM_022092	chr16,chr16,chr16	-,-,+	MSLNL,RPUSD1,CHTF18	712,6169,6357
chr17:58159195-58159802	chr17	+	58159299	58159654	True	NM_000717,NR_030732,NM_022070	chr17,chr17,chr17	+,-,-	CA4,LOC645638,HEATR6	67647,6232,-3007
chr3:37183857-37185464	chr3	+	37184101	37185331	True	NM_001172713,NM_001134369	chr3,chr3	+,-	GOLGA4,LRRFIP2	99350,32570
chr6:35179819-35181346	chr6	+	35179877	35181133	True	NM_152753,NM_018679	chr6,chr6	+,-	SCUBE3,TCP11	1056,-70690
chr5:56778649-56780488	chr5	+	56778792	56780179	True	NM_001127236,NM_001017992	chr5,chr5	+,-	GPBP1,ACTBL2	-268942,-156
chr2:107116829-107118718	chr2	+	107117116	107118280	True	NM_001144013,NR_003506	chr2,chr2	-,+	RGPD3,PLGLA	-32315,-114398
chr2:107116829-107118718	chr2	-	87074929	87075609	False	NR_037931,NM_001178100	chr2,chr2	+,-	LOC100286979,CD8B	13338,13495
chr6:158246202-158247454	chr6	+	158246354	158247259	True	NM_016224,NM_032861	chr6,chr6	+,-	SNX9,SERAC1	-2118,342103
chr9:132514268-132514598	chr9	+	132514271	132514599	True	NM_014506,NM_004878	chr9,chr9	+,-	TOR1B,PTGES	50832,795
chr17:62658917-62659246	chr17	+	62658929	62659092	True	NM_022739,NM_138363	chr17,chr17	-,+	SMURF2,CCDC45	-543,-155822
chr16:15147935-15148203	chr16	+	15148043	15148201	True	NM_015027,NM_173474	chr16,chr16	+,-	PDXDC1,NTAN1	-79261,1682
chr12:25348482-25348827	chr12	+	25348563	25348863	True	NM_001001660,NM_001204101,NM_001204102,NM_001082972,NM_001082973,NM_018272	chr12,chr12,chr12,chr12,chr12,chr12	+,-,-,-,-,-	LYRM5,CASC1,CASC1,CASC1,CASC1,CASC1	-468,-469,-469,-469,-469,-469
chr22:39929939-39930496	chr22	+	39929938	39930540	True	NM_182810,NM_194326	chr22,chr22	+,-	ATF4,RPS19BP1	-13420,-1078
chr18:53665322-53665537	chr18	+	53665394	53665478	True	NM_003199,NM_015285	chr18,chr18	-,+	TCF4,WDR7	-409534,653137
chr16:67907648-67908171	chr16	+	67907672	67908164	True	NM_014329,NM_025082	chr16,chr16	+,-	EDC4,CENPT	-724,-26311
chr16:28934309-28935871	chr16	+	28934349	28935547	True	NM_024816,NM_001770,NM_001178098	chr16,chr16,chr16	-,+,+	RABEP2,CD19,CD19	1035,7712,7712
chr13:100002332-100004095	chr13	+	100002994	100004130	True	NM_004951,NR_030353,NR_024013	chr13,chr13,chr13	-,+,+	GPR183,MIR623,FKSG29	-43245,4254,100
chr4:36186690-36187096	chr4	+	36186696	36187119	True	NM_015230,NM_001136536	chr4,chr4	-,+	ARAP2,DTHD1	58910,96124
chr8:76450532-76451079	chr8	+	76450536	76451098	True	NM_004133,NR_024360	chr8,chr8	+,-	HNF4G,LOC100192378	1104,1144463
chr14:103388760-103389039	chr14	+	103388765	103389053	True	NM_006035,NM_030943	chr14,chr14	-,+	CDC42BPB,AMN	134739,47
chr12:132690496-132690820	chr12	+	132690519	132690847	True	NM_024078,NM_021808	chr12,chr12	+,-	NOC4L,GALNT9	-61577,-4
chr1:1267567-1267848	chr1	+	1267577	1267805	True	NM_152228,NM_017871,NM_001029885	chr1,chr1,chr1	+,-,+	TAS1R3,CPSF3L,GLTPD1	-902,-7531,-7485
chr19:9083878-9084357	chr19	+	9083929	9084367	True	NM_001004456,NM_024690	chr19,chr19	+,-	OR1M1,MUC16	119553,7701
chr19:50552901-50553706	chr19	+	50553072	50553700	True	NM_016440,NR_027257	chr19,chr19	-,+	VRK3,FLJ26850	-24267,236
chr1:16303869-16304283	chr1	+	16303930	16303992	True	NM_003443,NM_178840	chr1,chr1	-,+	ZBTB17,C1orf64	-1303,26738
chrY:1406241-1407783	chrY	+	1406277	1407529	True	NM_001636,NM_002183	chrY,chrY	-,+	SLC25A6,IL3RA	53560,-819
chrY:1406241-1407783	chrX	+	1456277	1457529	False	NM_001636,NM_002183	chrX,chrX	-,+	SLC25A6,IL3RA	53560,-819
chr6:29364416-29365285	chr6_mcf_hap5	+	667979	668057	False	NM_013936,NM_030959	chr6_mcf_hap5,chr6_mcf_hap5	+,-	OR12D2,OR12D3	-432,-21590
chr6:29364416-29365285	chr6	+	29364775	29364875	True	NM_013936,NM_030959	chr6,chr6	+,-	OR12D2,OR12D3	-410,-21707
chr6:29364416-29365285	chr6_mann_hap4	+	667785	667863	False	NM_013936,NM_030959	chr6_mann_hap4,chr6_mann_hap4	+,-	OR12D2,OR12D3	-432,-21584
chr6:29364416-29365285	chr6_cox_hap2	+	883587	883665	False	NM_013936,NM_030959	chr6_cox_hap2,chr6_cox_hap2	+,-	OR12D2,OR12D3	-432,-21585
chr10:4927015-4927949	chr10	+	4927302	4927895	True	NM_001040177,NR_026743	chr10,chr10	+,-	AKR1E2,tAKR	-58962,30632
chr7:137026890-137028264	chr7	+	137026905	137028184	True	NM_002825,NR_030165	chr7,chr7	-,+	PTN,MIR490	412,-439053
chr9:130891600-130891851	chr9	+	130891651	130891749	True	NR_027811,NR_027812,NR_024425,NM_025072	chr9,chr9,chr9,chr9	-,-,+,-	PTGES2,PTGES2,LOC389791,PTGES2	-939,-939,-894,-1177
chr2:121105856-121106468	chr2	+	121105875	121106229	True	NM_002193,NR_027181	chr2,chr2	+,-	INHBB,LOC84931	-2207,117746
chr3:47323131-47323553	chr3	+	47323193	47323540	True	NM_022342,NM_025010,NM_001134878,NM_182902	chr3,chr3,chr3,chr3	-,+,-,-	KIF9,KLHL18,KIF9,KIF9	848,789,848,848
chr2:198365580-198366208	chr2	+	198365633	198365991	True	NM_002157,NM_002156,NM_001202485,NM_199440	chr2,chr2,chr2,chr2	+,-,+,-	HSPE1,HSPD1,HSPE1-MOBKL3,HSPD1	-969,-993,-969,-635
chr7:5866343-5866666	chr7	+	5866402	5866490	True	NM_207116,NR_023382	chr7,chr7	-,+	RNF216,ZNF815	-45041,-3667
chr6:146208761-146209587	chr6	+	146208893	146209566	True	NM_032145,NM_000838	chr6,chr6	-,+	FBXO30,GRM1	-72972,139215
chr12:58183040-58183944	chr12	+	58183077	58183787	True	NM_023033,NM_001172697,NM_001172695,NM_001172696,NM_005726	chr12,chr12,chr12,chr12,chr12	-,+,+,+,+	METTL1,TSFM,TSFM,TSFM,TSFM	-17163,-6612,-6612,-6612,-6612
chr1:200842878-200843112	chr1	+	200842877	200843107	True	NM_005298,NM_017596	chr1,chr1	+,-	GPR25,KIF21B	-762,149771
chr4:47505171-47506670	chr4	+	47505251	47506490	True	NM_020453,NM_017845	chr4,chr4	+,-	ATP10D,COMMD8	-17893,-39575
chr21:44741863-44742212	chr21	+	44741931	44742257	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	127646,104795
chr2:101034281-101034570	chr2	+	101034285	101034529	True	NM_004854,NM_001011717	chr2,chr2	-,+	CHST10,NMS	-155,52414
chr13:28743661-28743905	chr13	+	28743670	28743880	True	NR_029383,NM_175854	chr13,chr13	-,+	LOC100288730,PAN3	-30359,-31084
chr5:148958632-148958917	chr5	+	148958635	148958899	True	NM_001892,NM_001001669	chr5,chr5	-,+	CSNK1A1,ARHGEF37	-27628,2235
chr1:153599477-153599682	chr1	+	153599477	153599655	True	NM_015607,NM_001024211,NM_001024212,NM_001024213,NM_006271,NM_001024210,NM_005979	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,-,+,-,-	CHTOP,S100A13,S100A13,S100A13,S100A1,S100A13,S100A13	6869,512,139,23,1217,6963,1110
chr14:69259831-69260087	chr14	+	69259873	69260100	True	NM_004926,NM_207442,NM_001193360	chr14,chr14,chr14	-,-,+	ZFP36L1,C14orf181,EXD2	-88,3140,398093
chr3:3080123-3081773	chr3	+	3080256	3081803	True	NM_000564,NM_182916	chr3,chr3	-,+	IL5RA,TRNT1	70305,86796
chr5:179110427-179111431	chr5	+	179110477	179111224	True	NM_001024649,NM_001164444	chr5,chr5	+,-	CANX,CBY3	14705,-2502
chr21:44856791-44857525	chr21	+	44856818	44857558	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	12345,-9816
chr16:66783256-66783837	chr16	+	66783270	66783886	True	NM_005182,NM_006141	chr16,chr16	+,-	CA7,DYNC1LI2	94395,1689
chr7:140785659-140786694	chr7	+	140785669	140786501	True	NM_053035,NM_001195278	chr7,chr7	-,+	MRPS33,LOC100131199	-70888,-11688
chrX:148863920-148864132	chrX	+	148864068	148864164	True	NM_016153,NM_001164415,NM_032508,NM_005365,NM_001080790	chrX,chrX,chrX,chrX,chrX	+,+,-,+,+	HSFX1,HSFX2,TMEM185A,MAGEA9,MAGEA9B	-8393,-8393,-150581,-519,-526
chrX:148863920-148864132	chrX	-	148668544	148668640	False	NM_016153,NM_001164415,NM_005365,NM_001171909,NM_001080790	chrX,chrX,chrX,chrX,chrX	-,-,-,+,-	HSFX1,HSFX2,MAGEA9,CXorf40A,MAGEA9B	8384,8384,519,-42529,526
chr14:105394742-105394970	chr14	+	105394905	105394969	True	NM_138420,NM_138790	chr14,chr14	-,+	AHNAK2,PLD4	49775,-3769
chr3:119181432-119182151	chr3	+	119181431	119182105	True	NM_018266,NM_152305,NR_024265	chr3,chr3,chr3	-,+,+	TMEM39A,POGLUT1,POGLUT1	416,5679,5679
chr13:114019624-114020065	chr13	+	114019791	114020033	True	NM_024719,NM_005561	chr13,chr13	-,+	GRTP1,LAMP1	-1328,-68373
chr17:3540850-3541622	chr17	+	3541064	3541508	True	NM_004937,NM_001031681,NM_013276	chr17,chr17,chr17	+,+,-	CTNS,CTNS,SHPK	-1353,-1353,-1448
chrX:117637113-117638266	chrX	+	117637545	117638314	True	NM_001168301,NM_144658	chrX,chrX	-,+	KLHL13,DOCK11	-386242,-7724
chr6:43444090-43445312	chr6	+	43444370	43444990	True	NM_001146020,NM_206539,NM_080604,NR_027394,NM_001146019,NM_001146018,NM_001146016	chr6,chr6,chr6,chr6,chr6,chr6,chr6	+,-,+,+,+,+,+	TJAP1,DLK2,TJAP1,TJAP1,TJAP1,TJAP1,TJAP1	270,-20584,270,270,270,270,270
chr10:46165833-46167490	chr10	+	46167156	46167549	True	NM_174890,NM_001169106,NM_001128324	chr10,chr10,chr10	-,+,-	ANUBL1,FAM21C,ANUBL1	767,55098,767
chr16:30366055-30366327	chr16	+	30366078	30366218	True	NM_006110,NM_013292,NR_024465	chr16,chr16,chr16	-,+,-	CD2BP2,MYLPF,CD2BP2	514,19904,87
chr11:64405358-64405872	chr11	+	64405694	64405816	True	NM_153378,NM_138734	chr11,chr11	+,-	SLC22A12,NRXN2	-47463,5021
chr18:33768548-33770405	chr18	+	33768612	33770081	True	NM_017947,NM_001099406	chr18,chr18	+,-	MOCOS,SLC39A6	-1183,-59255
chr2:129076692-129077235	chr2	+	129077064	129077220	True	NM_004807,NR_027671	chr2,chr2	-,+	HS6ST1,UGGT1	-893,-228336
chr7:6099963-6100743	chr7	+	6100111	6100649	True	NM_001134335,NM_032172,NM_014413	chr7,chr7,chr7	-,+,-	EIF2AK1,USP42,EIF2AK1	-1251,43900,-1251
chr13:98605223-98605949	chr13	+	98605482	98605986	True	NM_178861,NM_002271	chr13,chr13	-,+	RNF113B,IPO5	223585,-58
chr17:18760570-18760817	chr17	+	18760662	18760730	True	NM_002767,NM_001039999	chr17,chr17	+,-	PRPSAP2,FAM83G	761,147386
chr19:1408861-1409230	chr19	+	1408865	1409123	True	NM_138924,NM_018959,NM_170711,NM_000156	chr19,chr19,chr19,chr19	-,+,+,-	GAMT,DAZAP1,DAZAP1,GAMT	-7313,-1332,-1332,-7313
chr11:116639585-116639994	chr11	+	116639774	116639995	True	NM_001159736,NM_032725,NM_000040	chr11,chr11,chr11	-,-,+	BUD13,BUD13,APOC3	3778,3778,60628
chr19:10218674-10219031	chr19	+	10218739	10219073	True	NM_002566,NM_031917,NM_001198690,NR_003688,NR_004381,NM_001040664,NM_020230	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+,+	P2RY11,ANGPTL6,PPAN-P2RY11,SNORD105B,SNORD105,PPAN-P2RY11,PPAN	3123,-5314,-1891,1351,-463,-1891,-1891
chr2:73298448-73298702	chr2	+	73298455	73298734	True	NM_144579,NM_001134462	chr2,chr2	-,+	SFXN5,NOTO	281,130651
chr3:69817758-69818848	chr3	+	69817782	69818846	True	NM_001184967,NM_015123,NM_006722	chr3,chr3,chr3	+,-,+	MITF,FRMD4B,MITF	-5126,-382352,-4871
chr18:11983742-11984686	chr18	+	11983786	11984437	True	NM_023075,NM_014214	chr18,chr18	-,+	MPPE1,IMPA2	-75145,-2410
chr7:143017515-143018208	chr7	+	143017596	143018017	True	NM_000083,NM_014690	chr7,chr7	+,-	CLCN1,FAM131B	-4429,41206
chr2:130878823-130879191	chr2	+	130878822	130879142	True	NM_001099771,NR_033903	chr2,chr2	-,+	POTEF,LOC285103	7703,8053
chr2:130878823-130879191	chr2	-	131974891	131975212	False	NM_001009993,NM_001083538	chr2,chr2	-,+	FAM168B,POTEE	-123887,711
chr10:69867405-69868570	chr10	+	69867525	69868152	True	NM_032578,NM_022079	chr10,chr10	+,-	MYPN,HERC4	1097,-32422
chr22:44708465-44708706	chr22	+	44708470	44708664	True	NM_001099294,NM_001137606	chr22,chr22	-,+	KIAA1644,PARVG	117,-131264
chr4:135122257-135122642	chr4	+	135122264	135122606	True	NM_032961,NM_001114734	chr4,chr4	+,-	PCDH10,PABPC4L	-1051845,347
chr13:28000307-28000952	chr13	+	28000310	28000998	True	NM_002097,NM_001166262	chr13,chr13	+,-	GTF3A,MTIF3	-1686,23378
chr12:54955166-54957014	chr12	+	54955329	54957007	True	NM_006741,NM_001165975	chr12,chr12	-,+	PPP1R1A,PDE1B	25487,-282
chrX:153029744-153030295	chrX	+	153029855	153030026	True	NM_001163257,NM_004135,NM_005393	chrX,chrX,chrX	+,-,+	PLXNB3,IDH3G,PLXNB3	-255,29991,-255
chr10:90564679-90566600	chr10	+	90564742	90566297	True	NM_144590,NM_001128215	chr10,chr10	-,+	ANKRD22,LIPM	45486,-2326
chr8:37475660-37477579	chr8	+	37476192	37477555	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	75745,128069
chr3:24537557-24538185	chr3	+	24537624	24538135	True	NM_001145425,NM_001128176,NM_000461,NM_001128177	chr3,chr3,chr3,chr3	+,-,-,-	NR1D2,THRB,THRB,THRB	-550063,-1358,-1311,-1311
chr22:40443529-40443783	chr22	+	40443759	40443831	True	NM_001024843,NM_152512	chr22,chr22	+,-	TNRC6B,ENTHD1	-2990,-153965
chr18:72125557-72126310	chr18	+	72125578	72126088	True	NM_001044369,NM_018235	chr18,chr18	-,+	FAM69C,CNDP2	-1075,37411
chr4:170190323-170191356	chr4	+	170190323	170191361	True	NM_020870,NM_001829	chr4,chr4	-,+	SH3RF1,CLCN3	938,350360
chr1:110035277-110036561	chr1	+	110035487	110036512	True	NM_020703,NM_153340,NM_001134403,NM_001134402,NM_182580,NM_001134404,NM_001134400	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,+,+,+,+	AMIGO1,ATXN7L2,CYB561D1,CYB561D1,CYB561D1,CYB561D1,CYB561D1	15874,-8977,188,145,188,188,188
chr10:31996292-31997478	chr10	+	31996522	31997414	True	NM_001174094,NM_018287	chr10,chr10	+,-	ZEB1,ARHGAP12	-386510,220406
chr12:32276702-32277630	chr12	+	32276905	32277603	True	NM_001714,NM_001013699	chr12,chr12	+,-	BICD1,H3F3C	-16771,-331730
chr17:40951268-40951936	chr17	+	40951296	40951488	True	NM_173478,NM_001040431	chr17,chr17	+,-	CNTD1,CCDC56	-494,-592
chr4:82025076-82025898	chr4	+	82025296	82025901	True	NM_006259,NM_001201	chr4,chr4	-,+	PRKG2,BMP3	100364,-73242
chr7:6009808-6010082	chr7	+	6009927	6010111	True	NM_006303,NM_173565,NM_001099697	chr7,chr7,chr7	+,-,-	AIMP2,RSPH10B,RSPH10B2	38770,253,253
chr7:6009808-6010082	chr7	-	6794012	6794126	False	NM_173565,NM_016265,NM_001099697	chr7,chr7,chr7	+,-,+	RSPH10B,ZNF12,RSPH10B2	-323,-47446,-323
chr11:129688733-129690064	chr11	+	129688921	129689909	True	NM_138788,NM_006165	chr11,chr11	+,-	TMEM45B,NFRKB	-3231,73045
chr17:79495542-79495806	chr17	+	79495582	79495796	True	NM_001077182,NM_012418,NR_037688	chr17,chr17,chr17	+,+,-	FSCN2,FSCN2,ACTG1	-216,-216,-15690
chr12:112276941-112278254	chr12	+	112277167	112278066	True	NR_015404,NM_139078,NM_003668	chr12,chr12,chr12	-,+,+	C12orf47,MAPKAPK5,MAPKAPK5	2705,2212,2212
chr15:101417473-101418478	chr15	+	101417502	101418355	True	NM_001040616,NM_000693	chr15,chr15	-,+	LINS,ALDH1A3	-275057,1653
chr6:42846233-42846626	chr6	+	42846261	42846664	True	NM_001008739,NM_198486	chr6,chr6	-,+	C6orf226,RPL7L1	11940,1006
chr17:67417977-67419317	chr17	+	67418018	67418933	True	NM_172232,NM_002758	chr17,chr17	-,+	ABCA5,MAP2K6	-94695,-7231
chr12:497642-498117	chr12	+	497645	498155	True	NM_001042603,NM_001130147,NM_001130148	chr12,chr12,chr12	-,+,+	KDM5A,CCDC77,CCDC77	515,360,360
chr17:39663830-39664831	chr17	+	39663915	39664808	True	NM_005801,NM_002274,NM_153490	chr17,chr17,chr17	+,-,-	EIF1,KRT13,KRT13	180318,-2050,-2050
chr16:69139107-69139416	chr16	+	69139162	69139456	True	NM_138612,NM_005329,NM_001199280,NM_001040146	chr16,chr16,chr16,chr16	+,+,+,-	HAS3,HAS3,HAS3,CHTF8	672,1986,10,26656
chr11:60682007-60682208	chr11	+	60682164	60682224	True	NM_014502,NM_017870,NM_024092,NM_178031	chr11,chr11,chr11,chr11	-,+,+,+	PRPF19,TMEM132A,TMEM109,TMEM132A	-8103,9688,-844,9688
chr12:113237841-113238753	chr12	+	113237941	113238745	True	NM_014954,NM_001143854,NM_001193521	chr12,chr12,chr12	+,+,-	RPH3A,RPH3A,RASAL1	-8443,-8443,334864
chr2:224565366-224565732	chr2	+	224565371	224565578	True	NM_022915,NM_003469	chr2,chr2	+,-	MRPL44,SCG2	256542,-98154
chr21:30457417-30457790	chr21	+	30457421	30457771	True	NM_020152,NM_006585	chr21,chr21	+,-	C21orf7,CCT8	-4604,-11411
chr3:74556941-74558739	chr3	+	74557097	74558790	True	NR_031714,NM_020872	chr3,chr3	+,-	MIR1324,CNTN3	1121123,11610
chr1:110019403-110020590	chr1	+	110019521	110020383	True	NM_020703,NM_153340	chr1,chr1	-,+	AMIGO1,ATXN7L2	32003,6177
chr17:44403696-44404495	chr17	+	44404404	44404482	True	NM_001103154,NM_014834	chr17,chr17	-,+	ARL17B,LRRC37A	34712,-31968
chr16:71733542-71734015	chr16	+	71733608	71734037	True	NR_033337,NM_001017967	chr16,chr16	-,+	SNORA70D,MARVELD3	-1004,-73589
chr1:59163863-59165425	chr1	+	59164140	59165426	True	NR_034014,NM_001085487	chr1,chr1	+,-	LOC100131060,MYSM1	85396,371
chr7:44612639-44613002	chr7	+	44612662	44613016	True	NM_182547,NM_001003941,NM_019082	chr7,chr7,chr7	-,+,-	TMED4,OGDH,DDX56	8861,33104,1171
chr20:6016541-6017108	chr20	+	6016948	6017137	True	NM_001127458,NM_152611	chr20,chr20	+,-	CRLS1,LRRN4	-29109,17612
chr3:49849856-49850505	chr3	+	49849862	49850554	True	NM_003335,NM_203370	chr3,chr3	-,+	UBA7,C3orf54	887,-9226
chr9:139973929-139974582	chr9	+	139974050	139974611	True	NM_207309,NM_178448,NM_016219,NR_027447	chr9,chr9,chr9,chr9	+,-,+,-	UAP1L1,C9orf140,MAN1B1,LOC100289341	-2148,-9022,6805,6715
chr3:50383221-50383488	chr3	+	50383229	50383519	True	NM_015896,NM_007022,NM_006545,NM_170712,NM_170713,NM_007182,NM_170714	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-,-	ZMYND10,CYB561D2,NPRL2,RASSF1,RASSF1,RASSF1,RASSF1	-73,4777,5017,-7565,-8334,-4862,-4862
chr1:155296771-155298577	chr1	+	155296990	155298130	True	NM_001105205,NM_001105204,NM_014328,NM_001105203,NM_001039517	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	RUSC1,RUSC1,RUSC1,RUSC1,C1orf104	-3314,-6402,-2824,-6402,-3052
chr17:39150308-39152124	chr17	+	39150332	39152164	True	NM_031959,NM_033061,NM_033185,NM_182497	chr17,chr17,chr17,chr17	-,+,-,-	KRTAP3-2,KRTAP4-7,KRTAP3-3,KRT40	4024,88294,53,-6945
chr12:123704022-123704595	chr12	+	123704139	123704541	True	NM_022782,NM_152269	chr12,chr12	-,+	MPHOSPH9,C12orf65	1950,13302
chr16:58550396-58551537	chr16	+	58550442	58551244	True	NM_001160305,NR_002978,NM_024860	chr16,chr16,chr16	+,-,+	SETD6,SNORA46,SETD6	-1110,31345,-1110
chr6:152948647-152949439	chr6	+	152948851	152949326	True	NM_025107,NM_182961,NM_033071	chr6,chr6,chr6	+,-,-	MYCT1,SYNE1,SYNE1	69703,9265,8717
chr6:117004117-117004833	chr6	+	117004194	117004641	True	NM_145062,NM_002269	chr6,chr6	-,+	ZUFSP,KPNA5	-14221,-1890
chr11:112126676-112127328	chr11	+	112126873	112127344	True	NM_000317,NM_001145024	chr11,chr11	+,-	PTS,C11orf34	-29838,4300
chr6:31792888-31793207	chr6_qbl_hap6	+	3086676	3086908	False	NM_001040437,NR_002745,NM_005527,NM_005346,NM_005345,NM_001040438	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,HSPA1B,HSPA1A,C6orf48	9443,9790,-10194,2254,-9789,9443
chr6:31792888-31793207	chr6_dbb_hap3	+	3078612	3078844	False	NM_001040437,NR_002745,NM_005527,NM_005346,NM_005345,NM_001040438	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,HSPA1B,HSPA1A,C6orf48	9435,9782,-10190,2254,-9785,9435
chr6:31792888-31793207	chr6	+	31793025	31793257	True	NM_001040437,NR_002745,NM_005527,NM_005346,NM_005345,NM_001040438	chr6,chr6,chr6,chr6,chr6,chr6	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,HSPA1B,HSPA1A,C6orf48	9435,9782,-10190,2254,-9785,9435
chr6:31792888-31793207	chr6_apd_hap1	+	3107789	3108021	False	NM_001040437,NR_002745,NM_005527,NM_005346,NM_005345,NM_001040438	chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,HSPA1B,HSPA1A,C6orf48	9425,9772,-10193,2254,-9788,9425
chr6:31792888-31793207	chr6_cox_hap2	+	3302608	3302840	False	NM_001040437,NR_002745,NM_005527,NM_005346,NM_005345,NM_001040438	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,+,-,+,+,+	C6orf48,SNORD48,HSPA1L,HSPA1B,HSPA1A,C6orf48	9428,9775,-10193,2253,-9788,9428
chr1:155115783-155116218	chr1	+	155115813	155115877	True	NM_018973,NM_153741,NM_018845,NM_001122839,NM_001122837	chr1,chr1,chr1,chr1,chr1	-,-,+,+,+	DPM3,DPM3,SLC50A1,SLC50A1,SLC50A1	-2930,-2817,-7576,-7576,-7576
chrX:72783087-72783400	chrX	+	72783093	72783397	True	NR_029423,NM_001039840	chrX,chrX	-,+	LOC139201,CHIC1	-172,-160
chr6:88411707-88411962	chr6	+	88411744	88411890	True	NM_018064,NM_001197259,NR_002767	chr6,chr6,chr6	-,+,-	AKIRIN2,ORC3,AKIRIN2-AS1	145,-112010,-811
chrX:110420848-110421523	chrX	+	110420949	110421570	True	NM_001128173,NM_014289	chrX,chrX	+,-	PAK3,CAPN6	-54708,92269
chr17:20536868-20537125	chr17	+	20536871	20537007	True	NM_001190790,NR_029393	chr17,chr17	+,-	CDRT15L2,KRT16P3	-53885,-129060
chr3:146189644-146190341	chr3	+	146189662	146190385	True	NM_003412,NM_001199978	chr3,chr3	+,-	ZIC1,PLSCR2	936795,-2574
chr19:796871-797286	chr19	+	796903	797251	True	NM_024888,NM_175847,NM_031991,NM_031990,NM_002819	chr19,chr19,chr19,chr19,chr19	-,+,+,+,+	LPPR3,PTBP1,PTBP1,PTBP1,PTBP1	24751,140,140,140,140
chr3:167335169-167335415	chr3	+	167335389	167335453	True	NM_178824,NM_001122752	chr3,chr3	-,+	WDR49,SERPINI1	35886,117978
chr4:54229912-54231531	chr4	+	54230010	54231400	True	NM_001134937,NM_152540	chr4,chr4	+,-	FIP1L1,SCFD2	12419,892
chr1:32929217-32929436	chr1	+	32929217	32929279	True	NM_001145720,NM_018045	chr1,chr1	+,-	ZBTB8B,BSDC1	1378,-69155
chrX:14043753-14044374	chrX	+	14043878	14044330	True	NM_001042480,NM_003611,NM_001042479,NM_017856	chrX,chrX,chrX,chrX	-,+,-,-	GEMIN8,OFD1,GEMIN8,GEMIN8	3755,-291097,3755,3755
chr19:57741579-57742019	chr19	+	57741699	57742065	True	NM_001012729,NM_001145078,NM_001023563,NM_001015878,NM_001015879,NM_003160	chr19,chr19,chr19,chr19,chr19,chr19	-,+,+,+,+,+	DUXA,ZNF805,ZNF805,AURKC,AURKC,AURKC	-62843,9987,9987,362,311,311
chr1:47878524-47879294	chr1	+	47878613	47879291	True	NR_026878,NM_012186	chr1,chr1	-,+	MGC12982,FOXE3	21072,2452
chr10:81204183-81204631	chr10	+	81204252	81204590	True	NM_001099692,NM_153367	chr10,chr10	+,-	EIF5AL1,ZCCHC24	67766,843
chr15:101792676-101792912	chr15	+	101792708	101792922	True	NM_014918,NM_024652	chr15,chr15	-,+	CHSY1,LRRK1	-571,-333302
chr19:41386767-41387382	chr19	+	41386793	41387173	True	NM_030589,NR_001278,NM_000764	chr19,chr19,chr19	-,+,-	CYP2A7,CYP2B7P1,CYP2A7	1534,42996,1534
chr4:108607396-108608210	chr4	+	108607624	108608077	True	NM_001136258,NM_005443	chr4,chr4	+,-	SGMS2,PAPSS1	137643,33393
chr10:134741853-134742864	chr10	+	134742101	134742887	True	NM_173572,NM_001083909	chr10,chr10	-,+	C10orf93,GPR123	13252,158521
chr17:79306235-79307005	chr17	+	79306237	79307043	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	66496,-1763
chr17:72920766-72921005	chr17	+	72920838	72920970	True	NM_173477,NM_178160	chr17,chr17	-,+	USH1G,OTOP2	-1487,-519
chr5:66149069-66149976	chr5	+	66149069	66150025	True	NM_005582,NM_015183	chr5,chr5	-,+	CD180,MAST4	342642,-24516
chr3:138761607-138762726	chr3	+	138762132	138762610	True	NM_001134657,NR_026783	chr3,chr3	-,+	PRR23C,BPESC1	1174,60416
chr3:16221422-16222249	chr3	+	16221559	16222179	True	NM_001047434,NM_054110	chr3,chr3	-,+	DPH3,GALNTL2	84367,-5427
chr6:43147878-43149336	chr6	+	43148032	43149370	True	NM_006443,NM_003131,NM_015089	chr6,chr6,chr6	-,+,+	C6orf108,SRF,CUL9	47891,-9163,551
chr2:27441779-27442400	chr2	+	27441779	27442155	True	NM_021095,NM_001170795,NM_004341,NR_028323,NM_016085,NM_080592	chr2,chr2,chr2,chr2,chr2,chr2	-,+,+,-,+,+	SLC5A6,C2orf28,CAD,SLC5A6,C2orf28,C2orf28	-6604,-6616,-1577,-6604,-6616,-6936
chr16:29757342-29757586	chr16	+	29757342	29757544	True	NM_175900,NM_152338	chr16,chr16	-,+	C16orf54,ZG16	-2,32016
chr11:22648632-22649029	chr11	+	22648730	22649046	True	NM_001143830,NM_022725	chr11,chr11	+,-	GAS2,FANCF	39113,-1343
chr6:133563175-133563394	chr6	+	133563189	133563443	True	NM_172105,NM_052831,NM_004100,NM_172103	chr6,chr6,chr6,chr6	+,-,+,+	EYA4,C6orf192,EYA4,EYA4	-745,-443442,-745,-745
chrX:134097798-134099705	chrX	+	134098068	134099462	True	NM_019556,NM_001163438	chrX,chrX	-,+	MOSPD1,LOC644538	-48771,25505
chr20:23423484-23425161	chr20	+	23423483	23424777	True	NM_130794,NM_080830,NM_138283	chr20,chr20,chr20	-,-,+	CST11,CST11,CSTL1	8755,8755,-3212
chr7:104562653-104563822	chr7	+	104562780	104563679	True	NM_018682,NR_027374	chr7,chr7	+,-	MLL5,LOC723809	90957,3464
chr7:156741623-156741853	chr7	+	156741655	156741885	True	NM_022458,NM_138400	chr7,chr7	-,+	LMBR1,NOM1	-55753,531
chr19:3358284-3358509	chr19	+	3358338	3358466	True	NM_005597,NM_001136503,NM_205843	chr19,chr19,chr19	+,-,+	NFIC,C19orf77,NFIC	8106,122124,1149
chr10:47244633-47244890	chr10	+	47244752	47244937	True	NR_027634,NR_024495	chr10,chr10	+,-	FAM35B2,LOC642826	134782,-1258
chr10:47244633-47244890	chr10	+	46763987	46764081	False	NR_027632,NR_026566,NR_003611	chr10,chr10,chr10	+,-,-	FAM35B,BMS1P1,BMS1P5	133559,-1095,-1095
chr10:47244633-47244890	chr10	+	48953768	48953818	False	NR_026566,NM_153034,NR_003611	chr10,chr10,chr10	-,+,-	BMS1P1,ZNF488,BMS1P5	-1139,-598730,-1139
chr10:47244633-47244890	chr10	-	48184419	48184604	False	NM_002900,NR_024495	chr10,chr10	-,+	RBP3,LOC642826	206437,1251
chr20:61194835-61196551	chr20	+	61194958	61196526	True	NR_033263,NR_029676	chr20,chr20	-,+	C20orf200,MIR133A2	-46190,-32890
chr7:127879669-127879918	chr7	+	127879892	127879958	True	NM_000230,NM_001166135	chr7,chr7	+,-	LEP,RBM28	1372,104054
chr11:32113402-32113707	chr11	+	32113406	32113570	True	NM_001127612,NM_002901	chr11,chr11	-,+	PAX6,RCN1	-273897,-981
chr5:150946024-150946642	chr5	+	150946121	150946658	True	NM_001447,NM_078483	chr5,chr5	-,+	FAT2,SLC36A1	1904,-119010
chr1:19577674-19578034	chr1	+	19577799	19577937	True	NM_015047,NM_016183	chr1,chr1	-,+	KIAA0090,MRTO4	159,137
chr12:100750284-100750650	chr12	+	100750292	100750690	True	NM_001145288,NM_152317,NM_139319	chr12,chr12,chr12	+,-,+	SLC17A8,DEPDC4,SLC17A8	166,-89435,166
chr12:125398638-125399086	chr12	+	125398652	125398994	True	NM_021009,NM_080626	chr12,chr12	-,+	UBC,BRI3BP	643,79199
chr11:307866-308165	chr11	+	307941	308211	True	NM_006435,NM_003641,NM_001025295	chr11,chr11,chr11	+,+,-	IFITM2,IFITM1,IFITM5	29,5779,-8415
chr9:140065628-140065941	chr9	+	140065697	140065901	True	NM_001013653,NR_037416,NM_003731	chr9,chr9,chr9	-,-,+	LRRC26,MIR3621,SSNA1	-1206,-1975,17152
chr1:119911108-119911450	chr1	+	119911125	119911450	True	NM_001005783,NM_016527,NM_201263	chr1,chr1,chr1	+,+,-	HAO2,HAO2,WARS2	29,29,-227830
chr2:230926750-230927724	chr2	+	230926891	230927699	True	NM_174899,NM_152527	chr2,chr2	+,-	FBXO36,SLC16A14	-139742,6066
chr1:100711736-100712355	chr1	+	100711919	100712387	True	NM_001130841,NM_001918	chr1,chr1	+,-	RTCD1,DBT	19326,3077
chr11:1940943-1941172	chr11	+	1940969	1941203	True	NM_001042782,NM_001042780,NM_001042781,NR_036185,NM_006757	chr11,chr11,chr11,chr11,chr11	+,+,+,-,+	TNNT3,TNNT3,TNNT3,MIR4298,TNNT3	-221,-221,-221,-60203,-221
chr2:85922985-85923260	chr2	+	85923021	85923170	True	NM_198843,NM_012483,NM_006433	chr2,chr2,chr2	-,+,+	SFTPB,GNLY,GNLY	-27157,-1658,-1658
chr3:121267612-121269315	chr3	+	121267800	121268678	True	NM_199420,NM_001012659	chr3,chr3	-,+	POLQ,ARGFX	-2947,18099
chr1:242688615-242689828	chr1	+	242688780	242689716	True	NM_006027,NM_152666	chr1,chr1	+,-	EXO1,PLD5	-676800,-782
chr19:41198160-41198743	chr19	+	41198308	41198604	True	NM_025194,NM_004756	chr19,chr19	+,-	ITPKC,NUMBL	24403,-1752
chr15:43909390-43910941	chr15	+	43909611	43910968	True	NM_020990,NM_153700	chr15,chr15	+,-	CKMT1B,STRC	-24410,80
chr15:43909390-43910941	chr15	+	44009073	44010430	False	NM_001015001,NR_002318	chr15,chr15	+,-	CKMT1A,CATSPER2P1	-24040,28116
chr12:130389327-130390017	chr12	+	130389339	130389998	True	NM_133448,NM_007197	chr12,chr12	-,+	TMEM132D,FZD10	-1127,257005
chr17:45928089-45928303	chr17	+	45928093	45928351	True	NM_199262,NM_001145023,NM_138355,NM_033413	chr17,chr17,chr17,chr17	-,-,-,+	SP6,SCRN2,SCRN2,LRRC46	4939,-9394,-9394,-19151
chr11:117699416-117699944	chr11	+	117699542	117699984	True	NM_001680,NM_001558,NM_021603	chr11,chr11,chr11	-,+,-	FXYD2,IL10RA,FXYD2	-4083,157121,-735
chr21:15352522-15352818	chr18	-	14178841	14178891	True	NR_026756,NM_145287	chr18,chr18	+,-	LOC284233,ZNF519	158530,-46352
chr7:116503435-116505329	chr7	+	116503505	116505175	True	NR_002330,NM_006136	chr7,chr7	-,+	ST7OT1,CAPZA2	89268,-1005
chr2:6636732-6637934	chr2	+	6636736	6637866	True	NM_207315,NM_080657	chr2,chr2	-,+	CMPK2,RSAD2	368120,379929
chr7:138363965-138364743	chr7	+	138364314	138364758	True	NM_001139456,NM_001085429	chr7,chr7	-,+	SVOPL,TMEM213	-524,117980
chr2:100101292-100102845	chr2	+	100101315	100102723	True	NM_015904,NM_001037872,NM_016316	chr2,chr2,chr2	+,-,-	EIF5B,REV1,REV1	-147538,3807,3807
chr13:24460020-24460869	chr13	+	24460426	24460673	True	NM_001135816,NM_005932,NM_001014442	chr13,chr13,chr13	+,-,+	PCOTH,MIPEP,PCOTH	2918,2969,2354
chr1:26872344-26873702	chr1	+	26872768	26873522	True	NM_001006665,NR_031740,NM_173574	chr1,chr1,chr1	+,+,-	RPS6KA1,MIR1976,ZNF683	-476,7510,-173502
chr3:185215975-185216424	chr3	+	185216069	185216200	True	NM_080652,NM_021627	chr3,chr3	-,+	TMEM41A,SENP2	696,87830
chr17:79375103-79375339	chr17	+	79375136	79375316	True	NM_001080519,NR_036152	chr17,chr17	+,-	BAHCC1,MIR3186	-1647,42948
chr7:154000591-154001469	chr7	+	154000597	154001467	True	NM_001936,NM_007349	chr7,chr7	+,-	DPP6,PAXIP1	879,793265
chr6:26234255-26234817	chr6	+	26234330	26234714	True	NM_003532,NM_005320,NM_003540	chr6,chr6,chr6	+,-,+	HIST1H3E,HIST1H1D,HIST1H4F	-8998,553,5939
chr5:36152847-36153047	chr5	+	36152854	36152930	True	NR_030306,NM_001007527,NM_005983,NM_032637	chr5,chr5,chr5,chr5	-,-,+,+	MIR580,LMBRD2,SKP2,SKP2	-4764,-839,-716,-716
chr9:94712958-94713536	chr9	+	94713051	94713575	True	NR_015444,NM_004560	chr9,chr9	+,-	LOC100128076,ROR2	181540,-607
chr3:42699353-42699793	chr3	+	42699414	42699669	True	NM_145166,NR_027753	chr3,chr3	+,-	ZBTB47,HHATL	-4289,43394
chr4:119443293-119444537	chr4	+	119443331	119444578	True	NR_003135,NM_003619	chr4,chr4	+,-	CEP170P1,PRSS12	-5899,-169409
chr4:119443293-119444537	chr1	-	243319544	243320797	False	NM_006642,NR_029401	chr1,chr1	+,-	SDCCAG8,LOC731275	98509,-54498
chr2:189860857-189861202	chr2	+	189860869	189861166	True	NR_036076,NR_037401	chr2,chr2	-,+	MIR3129,MIR3606	136721,-564
chr10:21807698-21808840	chr10	+	21807849	21808885	True	NM_207371,NM_001195627	chr10,chr10	-,+	C10orf140,MLLT10	5784,14215
chr16:67995286-67995489	chr16	+	67995291	67995351	True	NM_001145961,NM_001145962,NM_001145963,NM_001145964,NM_005072,NM_017803	chr16,chr16,chr16,chr16,chr16,chr16	-,-,-,-,-,+	SLC12A4,SLC12A4,SLC12A4,SLC12A4,SLC12A4,DUS2L	7296,7296,2667,5480,7296,61852
chr1:204004916-204005684	chr1	+	204004992	204005688	True	NM_005686,NR_027902	chr1,chr1	+,-	SOX13,C1orf157	36557,4754
chr8:21835011-21835904	chr8	+	21835196	21835926	True	NM_003974,NM_182795	chr8,chr8	-,+	DOK2,NPM2	-63991,46427
chr6:3455777-3456164	chr6	+	3455901	3456205	True	NM_015482,NM_001128592	chr6,chr6	-,+	SLC22A23,PSMG4	638,-196790
chr21:37835932-37836490	chr21	+	37836079	37836293	True	NM_012130,NM_005441	chr21,chr21	-,+	CLDN14,CHAF1B	2482,-78450
chr11:46722738-46722990	chr11	+	46722793	46723025	True	NM_004308,NM_001184751,NM_024741	chr11,chr11,chr11	-,+,+	ARHGAP1,ZNF408,ZNF408	-673,-200,-527
chr3:101553498-101555198	chr3	+	101553596	101555224	True	NM_001005474,NM_000986	chr3,chr3	+,-	NFKBIZ,RPL24	-6813,-148033
chr9:139660416-139661193	chr9	+	139660424	139660792	True	NM_178469,NM_203347,NR_033913	chr9,chr9,chr9	-,-,+	LCN8,LCN15,LOC100128593	-7693,-1459,-19862
chr10:14998911-14999484	chr10	+	14999080	14999418	True	NM_001080836,NM_001033858,NM_022487,NM_001033857,NM_001033855	chr10,chr10,chr10,chr10,chr10	+,-,-,-,-	MEIG1,DCLRE1C,DCLRE1C,DCLRE1C,DCLRE1C	2019,-2986,-2986,-2986,-2986
chr16:68035247-68036147	chr16	+	68035326	68035454	True	NM_017803,NM_022355	chr16,chr16	+,-	DUS2L,DPEP2	21749,-1962
chr2:97524072-97524284	chr2	+	97524071	97524141	True	NM_016466,NM_199078	chr2,chr2	-,+	ANKRD39,CNNM3	-315,-42131
chr2:105047367-105048587	chr2	+	105047428	105048505	True	NR_015399,NR_037885	chr2,chr2	+,-	LOC150568,LOC100287010	2299,-22638
chr9:19101639-19102320	chr9	+	19101923	19102355	True	NM_006570,NM_017645	chr9,chr9	+,-	RRAGA,HAUS6	-52611,597
chr8:144691144-144691413	chr8	+	144691256	144691460	True	NM_023078,NM_032862,NM_003313	chr8,chr8,chr8	-,+,-	PYCRL,TIGD5,TSTA3	374,-11233,8322
chr10:99186291-99186510	chr10	+	99186295	99186504	True	NM_002629,NM_016046	chr10,chr10	+,-	PGAM1,EXOSC1	-320,19315
chr19:5792925-5794340	chr19	+	5793329	5794356	True	NM_020175,NM_001134316,NM_001161619,NM_004558	chr19,chr19,chr19,chr19	-,-,-,+	DUS3L,PRR22,DUS3L,NRTN	-2080,-8553,-2080,29461
chr17:42420637-42421991	chr17	+	42420639	42421805	True	NM_198475,NM_002087,NM_016016	chr17,chr17,chr17	-,+,-	FAM171A2,GRN,SLC25A39	19480,685,-18422
chr6:126302361-126303586	chr6	+	126302640	126303389	True	NM_016063,NM_001031712	chr6,chr6	-,+	HDDC2,TRMT11	-679358,4186
chr9:34568992-34569764	chr9	+	34569151	34569723	True	NR_024369,NM_001842	chr9,chr9	+,-	LOC415056,CNTFR	-1192,20049
chr17:40924939-40925372	chr17	+	40925081	40925363	True	NR_024462,NM_032353,NM_032387	chr17,chr17,chr17	-,+,+	LOC100190938,VPS25,WNK4	-11806,90,7285
chr10:70286791-70287004	chr10	+	70286814	70287050	True	NM_030625,NM_152707	chr10,chr10	+,-	TET1,SLC25A16	33066,280
chr17:79893662-79894192	chr17	+	79893764	79894032	True	NM_002359,NR_015454,NM_153824,NM_006907	chr17,chr17,chr17,chr17	-,+,-,-	MAFG,LOC92659,PYCR1,PYCR1	-8176,-8110,986,986
chr12:51983687-51984525	chr12	+	51983757	51984424	True	NM_014191,NM_007210	chr12,chr12	+,-	SCN8A,GALNT6	595,-198557
chr22:23850961-23851378	chr22	+	23851039	23851115	True	NM_153615,NM_020070	chr22,chr22	+,-	RGL4,IGLL1	181932,71430
chr3:169754892-169755267	chr3	+	169755011	169755092	True	NM_014373,NR_024409	chr3,chr3	+,-	GPR160,LOC100128164	642,-70489
chr7:148957222-148957754	chr7	+	148957221	148957620	True	NM_001001661,NM_001195220	chr7,chr7	-,+	ZNF425,ZNF783	-133783,1641
chr17:7807661-7807866	chr17	+	7807672	7807908	True	NR_003000,NR_024349	chr17,chr17	+,-	SCARNA21,LOC284023	1532,11407
chr10:71889728-71891043	chr10	+	71890149	71891009	True	NM_032797,NM_001198696,NM_018649	chr10,chr10,chr10	-,-,+	AIFM2,AIFM2,H2AFY2	1731,1731,-77856
chr3:135765187-135766463	chr3	+	135765362	135766032	True	NM_181897,NM_001145417	chr3,chr3	+,-	PPP2R3A,MSL2	-23836,147329
chr6:170625138-170626465	chr6	+	170625263	170626505	True	NM_032448,NM_005618	chr6,chr6	+,-	FAM120B,DLL1	-9477,-25566
chr16:57406255-57406455	chr16	+	57406254	57406504	True	NM_020313,NM_002996	chr16,chr16	-,+	CIAPIN1,CX3CL1	74915,-91
chr16:66961399-66961994	chr16	+	66961424	66962030	True	NM_003869,NM_001204746,NM_016062,NM_001204744,NM_001204745,NM_198061,NM_001128850,NM_004062,NM_004165,NR_024525,NR_036684	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,-,-,+,-,-,-,-,+	CES2,CDH16,FAM96B,CDH16,CDH16,CES2,RRAD,CDH16,RRAD,FAM96B,CES2	6316,-8537,6340,-8537,-8537,6316,-1985,-8537,-1985,6340,6343
chrX:57313384-57314873	chrX	+	57313642	57314757	True	NM_019003,NM_174912	chrX,chrX	-,+	SPIN2A,FAAH2	-149584,-583
chr1:110162832-110163173	chr1	+	110162907	110163185	True	NM_139156,NM_005272,NM_203404,NM_004037	chr1,chr1,chr1,chr1	+,-,+,+	AMPD2,GNAT2,AMPD2,AMPD2	-499,-7202,4863,90
chr11:1706095-1706463	chr11	+	1706407	1706479	True	NR_026642,NM_001012416	chr11,chr11	-,+	FAM99B,KRTAP5-6	430,11945
chr11:1706095-1706463	chr11	-	1687182	1687254	False	NR_026642,NR_026643	chr11,chr11	-,+	FAM99B,FAM99A	19655,-404
chr5:140740934-140741452	chr5	+	140740996	140741212	True	NM_018924,NM_032097,NM_018923,NM_032096,NM_032054,NM_018918,NM_032053,NM_005642,NM_018917	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,+,-,+	PCDHGB3,PCDHGB3,PCDHGB2,PCDHGB2,PCDHGA5,PCDHGA5,PCDHGA4,TAF7,PCDHGA4	8749,8749,-1344,-1344,2685,2685,-6279,-40645,-6279
chr15:31120513-31121110	chr15	+	31120718	31121150	True	NM_017762,NM_001146095	chr15,chr15	-,+	MTMR10,FAN1	162707,74904
chr6:114226749-114227393	chr6	+	114226844	114227406	True	NM_001527,NR_027060	chr6,chr6	-,+	HDAC2,FLJ34503	65003,-1344
chr6:36807209-36807475	chr6	+	36807270	36807524	True	NM_020939,NM_152734	chr6,chr6	-,+	CPNE5,C6orf89	-50,46115
chr3:160282396-160282618	chr3	+	160282484	160282640	True	NM_002268,NM_025047	chr3,chr3	-,+	KPNA4,ARL14	786,112307
chr2:219187461-219187769	chr2	+	219187516	219187654	True	NM_022572,NM_022152	chr2,chr2	+,-	PNKD,TMBIM1	247,-30236
chr1:53199956-53200491	chr1	+	53199956	53200400	True	NM_024646,NM_023077	chr1,chr1	+,-	ZYG11B,SELRC1	-7883,-35918
chrX:9431701-9432060	chrX	+	9431998	9432096	True	NM_001139466,NM_001139467,NM_005647,NM_001139468,NM_000273	chrX,chrX,chrX,chrX,chrX	+,+,+,+,-	TBL1X,TBL1X,TBL1X,TBL1X,GPR143	-721,-721,1104,-721,301959
chr20:34541910-34542129	chr20	+	34541920	34542176	True	NM_033630,NM_080834,NM_016558	chr20,chr20,chr20	-,+,-	SCAND1,C20orf152,SCAND1	422,14352,1155
chr10:70979850-70981202	chr10	+	70979875	70981145	True	NM_001057,NM_025130	chr10,chr10	-,+	TACR2,HKDC1	195579,-19
chr19:20606371-20607024	chr19	+	20606695	20607035	True	NR_036455,NM_052852	chr19,chr19	-,+	ZNF826P,ZNF486	786,-328669
chr4:666840-667511	chr4	+	667062	667488	True	NM_002477,NM_007100,NR_033743	chr4,chr4,chr4	+,-,-	MYL5,ATP5I,ATP5I	4222,689,689
chr9:37485212-37485418	chr9	+	37485259	37485407	True	NM_022490,NM_014872	chr9,chr9	+,-	POLR1E,ZBTB5	537,-19852
chr17:76775579-76777145	chr17	+	76775680	76776679	True	NM_017456,NM_030968,NM_004762	chr17,chr17,chr17	-,+,-	CYTH1,C1QTNF1,CYTH1	1752,243571,1752
chr1:223855631-223856319	chr1	+	223855677	223856365	True	NM_001146068,NM_001143962	chr1,chr1	+,-	CAPN2,CAPN8	32929,-2241
chr9:3526497-3526794	chr9	+	3526537	3526843	True	NM_134428,NM_002919,NR_026663	chr9,chr9,chr9	-,-,+	RFX3,RFX3,C9orf70	-554,-554,371802
chr18:12381225-12382651	chr18	+	12381991	12382621	True	NM_006796,NM_001142405	chr18,chr18	-,+	AFG3L2,SLMO1	-4716,25273
chr12:113861469-113861986	chr12	+	113861656	113861806	True	NM_138432,NM_006843	chr12,chr12	+,-	SDSL,SDS	-1491,-19964
chr3:125494486-125495639	chr3	+	125495307	125495387	True	NR_024250,NR_031687	chr3,chr3	+,-	LOC100125556,MIR548I1	140056,14058
chr1:114434472-114435257	chr1	+	114434565	114435072	True	NM_001010922,NM_022836	chr1,chr1	-,+	BCL2L15,DCLRE1B	-4396,12842
chr20:61450155-61450420	chr20	+	61450294	61450412	True	NM_001853,NM_006602	chr20,chr20	+,-	COL9A3,TCFL5	-1931,42753
chr17:52977575-52977959	chr17	+	52977575	52977959	True	NM_005486,NR_027941	chr17,chr17	+,-	TOM1L1,COX11	92,68155
chr7:130791110-130791650	chr7	+	130791304	130791652	True	NR_015431,NM_001145354,NR_024153	chr7,chr7,chr7	-,+,-	FLJ43663,MKLN1,FLJ43663	1960,3202,187
chr4:106664197-106664974	chr4	+	106664399	106664782	True	NM_001031720,NM_020395	chr4,chr4	+,-	GSTCD,INTS12	-32488,-34518
chr17:40189894-40191845	chr17	+	40190228	40191806	True	NM_017595,NR_029431	chr17,chr17	+,-	NKIRAS2,DNAJC7	-18192,-20513
chr2:54950081-54950460	chr2	+	54950087	54950461	True	NM_001039753,NM_007008	chr2,chr2	+,-	EML6,RTN4	1687,287059
chr6:35265377-35265585	chr6	+	35265379	35265603	True	NM_018679,NM_022047	chr6,chr6	-,+	TCP11,DEF6	-156192,-3
chr3:69915121-69915526	chr3	+	69915221	69915487	True	NM_015123,NM_198177	chr3,chr3	-,+	FRMD4B,MITF	-479791,21
chr11:6441052-6441391	chr11	+	6441123	6441297	True	NM_001164,NM_145689,NM_001007593	chr11,chr11,chr11	-,-,+	APBB1,APBB1,SMPD1	-823,-479,-29530
chr15:42652958-42654040	chr15	+	42653047	42654057	True	NM_173087,NM_000070,NM_024344,NM_001110503	chr15,chr15,chr15,chr15	+,+,+,-	CAPN3,CAPN3,CAPN3,TMEM87A	-1410,-1410,-1410,-87292
chr1:161672384-161674068	chr1	+	161672560	161673940	True	NM_001184866,NM_001184867,NM_001184873,NM_001184872,NM_032738,NM_001184870,NM_001184871,NR_002595	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,+,+,-	FCRLA,FCRLA,FCRLA,FCRLA,FCRLA,FCRLA,FCRLA,RPL31P11	2821,2821,2821,2821,2821,2821,2821,-17518
chr19:57703304-57704392	chr19	+	57703445	57704445	True	NM_001012729,NM_003417	chr19,chr19	-,+	DUXA,ZNF264	-24589,-628
chr22:27016685-27017199	chr22	+	27016820	27017214	True	NM_001886,NM_001887	chr22,chr22	+,-	CRYBA4,CRYBB1	713,-2829
chr15:21368280-21369122	chr10	+	43315166	43315216	False	NM_014753,NM_006955	chr10,chr10	+,-	BMS1,ZNF33B	-37263,-181174
chr15:21368280-21369122	chr22	+	22660688	22660738	False	NM_080764,NR_027293	chr22,chr22	-,+	ZNF280B,LOC96610	202817,-8276
chr15:21368280-21369122	chr16	-	33501837	33501887	False	NR_033866,NM_001205265	chr16,chr16	-,+	LOC390705,TP53TG3B	-203135,-239768
chr15:21368280-21369122	chr15	+	21368346	21368806	True	NR_027411,NR_028506	chr15,chr15	+,-	GOLGA8C,NF1P1	-600723,-233721
chr15:21368280-21369122	chr15	+	20361915	20362201	False	NR_036432,NR_027411	chr15,chr15	-,+	HERC2P3,GOLGA8C	349282,405472
chr19:36608961-36610183	chr19	+	36608962	36610210	True	NM_006233,NM_001281	chr19,chr19	-,+	POLR2I,TBCB	-2756,-3125
chr15:45313846-45314371	chr15	+	45313858	45314191	True	NR_034039,NM_003104,NM_014080	chr15,chr15,chr15	+,+,-	SORD,SORD,DUOX2	1110,1110,92219
chr1:23810896-23811305	chr1	+	23811007	23811327	True	NR_033691,NM_001143778,NM_017707	chr1,chr1,chr1	+,-,-	C1orf213,ASAP3,ASAP3	-115347,-257,-257
chr16:89576541-89577194	chr16	+	89576722	89577060	True	NM_199367,NM_003119,NM_013275	chr16,chr16,chr16	+,+,-	SPG7,SPG7,ANKRD11	-1978,-1978,-19753
chr16:11946125-11946744	chr16	+	11946147	11946620	True	NM_015659,NM_001192	chr16,chr16	-,+	RSL1D1,TNFRSF17	-705,112343
chr19:46318512-46318861	chr19	+	46318571	46318910	True	NM_030785,NM_004497	chr19,chr19	-,+	RSPH6A,FOXA3	34,48607
chr2:73931530-73931779	chr2	+	73931610	73931822	True	NM_016347,NR_003683	chr2,chr2	-,+	NAT8B,ALMS1P	-3143,-59615
chr8:95907794-95908074	chr8	+	95907810	95908066	True	NM_057749,NM_017864	chr8,chr8	-,+	CCNE2,INTS8	-328,-72327
chr19:52773828-52774332	chr19	+	52773901	52774381	True	NM_001010851,NM_001102657	chr19,chr19	+,-	ZNF766,ZNF836	-1128,-99005
chr4:46908139-46909961	chr4	+	46908267	46909807	True	NM_130902,NM_000812	chr4,chr4	-,+	COX7B2,GABRB1	1502,123487
chr12:121450825-121451190	chr12	+	121450883	121451129	True	NM_022895,NM_000545	chr12,chr12	-,+	C12orf43,HNF1A	3221,-34385
chr4:39364425-39365254	chr4	+	39364493	39365229	True	NM_002913,NM_001204747,NM_175737	chr4,chr4,chr4	-,-,+	RFC1,RFC1,KLB	2822,2822,43243
chr11:64360712-64361328	chr11	+	64360716	64361058	True	NM_153378,NM_144585,NM_138734	chr11,chr11,chr11	+,+,-	SLC22A12,SLC22A12,NRXN2	-2485,-2485,49779
chr2:31033132-31033597	chr2	+	31033141	31033595	True	NM_144575,NM_001002257	chr2,chr2	-,+	CAPN13,LCLAT1	-2830,-363061
chr4:170932852-170933187	chr4	+	170932864	170933212	True	NM_001009554,NM_173872	chr4,chr4	-,+	MFAP3L,CLCN3	-7929,-391193
chr19:55591700-55591927	chr19	+	55591810	55591880	True	NM_133180,NM_138412,NM_017729	chr19,chr19,chr19	+,-,+	EPS8L1,RDH13,EPS8L1	-4640,-10896,-101
chr1:91182532-91183171	chr1	+	91182555	91183056	True	NM_020063,NM_182976	chr1,chr1	-,+	BARHL2,ZNF326	55,-721928
chr12:122296782-122297061	chr12	+	122296882	122297060	True	NM_002813,NM_002150	chr12,chr12	+,-	PSMD9,HPD	29585,-113
chr19:38755645-38756938	chr19	+	38755805	38756640	True	NM_021102,NM_033256,NM_001166103	chr19,chr19,chr19	+,-,+	SPINT2,PPP1R14A,SPINT2	-758,-8633,-758
chr20:47659949-47660683	chr20	+	47660240	47660731	True	NM_001037328,NM_001316	chr20,chr20	-,+	STAU1,CSE1L	144223,2106
chr1:156893440-156893755	chr1	+	156893577	156893657	True	NM_144702,NR_030527	chr1,chr1	+,-	LRRC71,MIR765	-3204,12429
chr1:161687973-161688657	chr1	+	161688403	161688577	True	NM_001002901,NR_002595	chr1,chr1	+,-	FCRLB,RPL31P11	3879,-33361
chr6:137364634-137364951	chr6	+	137364693	137364868	True	NM_014432,NM_001008783	chr6,chr6	-,+	IL20RA,SLC35D3	1481,-121354
chrX:103004296-103005726	chrX	+	103004708	103005556	True	NM_001172285,NM_001128834	chrX,chrX	-,+	GLRA4,PLP1	-21156,25882
chr4:36311192-36312126	chr4	+	36311214	36312160	True	NM_001170700,NM_015230	chr4,chr4	+,-	DTHD1,ARAP2	-25634,-65235
chr18:48091681-48093222	chr18	+	48091711	48093266	True	NM_002747,NM_001127175	chr18,chr18	+,-	MAPK4,MRO	-5278,253225
chr9:94868396-94869804	chr9	+	94868845	94869769	True	NR_015444,NM_006415,NM_178324	chr9,chr9,chr9	+,-,-	LOC100128076,SPTLC1,SPTLC1	25346,7971,7971
chr9:94868396-94869804	chr9	-	85044924	85044983	False	NM_152573,NM_001001670	chr9,chr9	-,+	RASEF,FAM75D1	633119,-441297
chr14:94562761-94563876	chr14	+	94563057	94563821	True	NM_020414,NM_001130080	chr14,chr14	-,+	DDX24,IFI27	-15499,13257
chr2:234665591-234666353	chr2	+	234665604	234666400	True	NR_037695,NR_037694,NR_037696,NM_000463	chr2,chr2,chr2,chr2	-,-,-,+	LOC100286922,LOC100286922,LOC100286922,UGT1A1	-1613,-1613,-1613,2518
chr1:114504315-114506102	chr1	+	114504956	114506036	True	NM_181358,NM_006594	chr1,chr1	+,-	HIPK1,AP4B1	-8508,-57215
chr11:94801819-94803251	chr11	+	94801845	94802804	True	NM_032102,NM_016403	chr11,chr11	+,-	SRSF8,CWC15	-1840,-95069
chr14:94462193-94463074	chr14	+	94462215	94463059	True	NR_024183,NR_024182,NM_001202429,NR_024184	chr14,chr14,chr14,chr14	+,+,-,+	C14orf48,C14orf48,ASB2,C14orf48	582,556,-19139,582
chr4:10120624-10120857	chr4	+	10120666	10120888	True	NM_005112,NM_017491,NM_000798	chr4,chr4,chr4	-,-,+	WDR1,WDR1,DRD5	-2093,-2093,-337459
chr16:28997418-28997732	chr16	+	28997418	28997781	True	NM_001014987,NM_024816,NM_014387,NM_001014989,NM_001014988	chr16,chr16,chr16,chr16,chr16	+,-,+,+,+	LAT,RABEP2,LAT,LAT,LAT	-1082,-60886,-1082,-1322,-1082
chr17:55039228-55039553	chr17	+	55039398	55039465	True	NM_004645,NM_021626	chr17,chr17	-,+	COIL,SCPEP1	-987,16002
chr9:100882390-100883915	chr9	+	100882547	100883865	True	NM_018946,NM_014788,NM_033220,NM_033219	chr9,chr9,chr9,chr9	+,-,-,-	NANS,TRIM14,TRIM14,TRIM14	-63640,-1067,-1059,-1067
chr22:39546696-39547685	chr22	+	39546823	39547701	True	NM_181773,NM_175709	chr22,chr22	+,-	APOBEC3H,CBX7	-53645,887
chr15:23032644-23032851	chr15	+	23032776	23032862	True	NM_001008892,NM_001184888,NM_030922,NM_001008860,NM_001008894,NM_001033028,NM_001184889	chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,-,-,-,+,-	NIPA2,NIPA2,NIPA2,NIPA2,NIPA2,CYFIP1,NIPA2	1615,1615,1615,1615,1615,-77078,1615
chr2:230134141-230135564	chr2	+	230134180	230135547	True	NM_174899,NM_001100818,NM_017933	chr2,chr2,chr2	+,-,-	FBXO36,PID1,PID1	651659,560,560
chr12:122297784-122299662	chr12	+	122298246	122299661	True	NM_002813,NM_002150	chr12,chr12	+,-	PSMD9,HPD	26984,-1477
chr22:30900135-30900617	chr22	+	30900388	30900590	True	NM_001161368,NM_174977,NM_016498	chr22,chr22,chr22	-,-,+	SEC14L4,SEC14L4,MTFP1	1158,1158,-78828
chr16:81258281-81258933	chr16	+	81258302	81258915	True	NM_017429,NM_052892,NM_001076780	chr16,chr16,chr16	+,-,-	BCMO1,PKD1L2,PKD1L2	13380,-4327,-4327
chr2:191300548-191301921	chr2	+	191300745	191301896	True	NM_017694,NM_001142645	chr2,chr2	+,-	MFSD6,TMEM194B	-27717,97622
chr11:20182322-20182556	chr11	+	20182321	20182603	True	NM_001111019,NM_001029865	chr11,chr11	+,-	NAV2,DBX1	-137744,-451
chr12:57944101-57944567	chr12	+	57944429	57944615	True	NM_004984,NM_006400	chr12,chr12	+,-	KIF5A,DCTN2	-633,-3451
chr10:95427602-95428729	chr10	+	95427730	95428734	True	NM_145246,NM_006204	chr10,chr10	-,+	FRA10AC1,PDE6C	33659,-55444
chr22:29170344-29171171	chr22	+	29170824	29170975	True	NM_173510,NM_001079539	chr22,chr22	+,-	CCDC117,XBP1	-2220,25638
chr1:55680176-55680517	chr1	+	55680203	55680271	True	NM_015306,NM_174936	chr1,chr1	-,+	USP24,PCSK9	818,-175105
chr8:67975502-67976456	chr8	+	67975783	67976187	True	NM_024790,NM_006837	chr8,chr8	+,-	CSPP1,COPS5	415,-1221
chr12:112564063-112565305	chr12	+	112564174	112565107	True	NM_001143906,NM_024953,NM_006700	chr12,chr12,chr12	+,-,+	TRAFD1,NAA25,TRAFD1	-876,-17539,-876
chr15:30688207-30688503	chr15	+	30688372	30688532	True	NM_148911,NM_139320,NR_026858	chr15,chr15,chr15	-,-,+	CHRFAM7A,CHRFAM7A,FAM7A1	-2508,-2508,176225
chr15:30688207-30688503	chr15	+	32729721	32729881	False	NR_027470,NR_026859,NR_026858,NM_199357	chr15,chr15,chr15,chr15	-,-,-,+	FAM7A2,FAM7A3,FAM7A1,ARHGAP11A	-2471,-2656,-2471,177809
chr15:30688207-30688503	chr15	-	30393119	30393279	False	NR_026859,NM_175610	chr15,chr15	+,-	FAM7A3,TJP1	2655,-278413
chr15:30688207-30688503	chr15	-	30862116	30862276	False	NR_027470,NM_148911,NR_026858	chr15,chr15,chr15	+,-,+	FAM7A2,CHRFAM7A,FAM7A1	2481,-176252,2481
chr6:27179048-27180423	chr6	+	27179052	27179831	True	NM_005865,NM_080593	chr6,chr6	+,-	PRSS16,HIST1H2BK	35670,-64415
chr5:137225474-137225693	chr5	+	137225566	137225698	True	NM_014386,NM_006805	chr5,chr5	+,-	PKD2L2,HNRNPA0	-492,-135527
chr18:35147363-35147604	chr18	+	35147478	35147651	True	NM_020180,NM_001025088,NM_001025089,NM_001025087,NR_036202	chr18,chr18,chr18,chr18,chr18	-,-,-,-,+	CELF4,CELF4,CELF4,CELF4,MIR4318	-1478,-1478,-1478,-1478,89446
chr17:76122322-76122974	chr17	+	76122422	76122964	True	NM_152468,NM_001127198,NM_007267	chr17,chr17,chr17	+,-,-	TMC8,TMC6,TMC6	3894,1947,5574
chr1:170016481-170017936	chr1	+	170016885	170017421	True	NM_001136107,NM_001204517	chr1,chr1	+,-	METTL11B,KIFAP3	97766,20693
chr2:239143468-239145202	chr2	+	239143793	239145141	True	NR_026925,NM_001142853,NR_026926,NM_018645,NR_026923	chr2,chr2,chr2,chr2,chr2	-,-,-,-,+	LOC151174,HES6,LOC151174,HES6,LOC643387	-3475,3590,-3475,3590,-3517
chr4:1856240-1857070	chr4	+	1856866	1857030	True	NM_012318,NM_001042424	chr4,chr4	-,+	LETM1,WHSC1	994,16092
chr11:64646805-64647127	chr11	+	64646880	64646942	True	NM_006795,NM_006244	chr11,chr11	-,+	EHD1,PPP2R5B	-689,45200
chr2:153192872-153193360	chr2	+	153192875	153193399	True	NM_052905,NM_005843	chr2,chr2	+,-	FMNL2,STAM2	-1176,-160369
chr19:36549108-36549742	chr19	+	36549267	36549719	True	NM_001083961,NM_152658,NM_173636	chr19,chr19,chr19	+,-,+	WDR62,THAP8,WDR62	-3535,-3603,-3535
chr10:93254-93485	chr10	+	93258	93337	True	NM_001164154,NM_177987,NM_006624	chr10,chr10,chr10	-,-,+	TUBB8,TUBB8,ZMYND11	2220,1894,87067
chr10:93254-93485	chr16	-	90162284	90162336	False	NM_001098173,NR_023348	chr16,chr16	-,+	PRDM7,GAS8	-19946,-73327
chr22:25169356-25170369	chr22	+	25169398	25170354	True	NM_001008496,NR_001283	chr22,chr22	-,+	PIWIL3,TOP1P2	379,-8981
chr12:10822333-10824076	chr12	+	10822841	10824089	True	NM_005042,NM_018423	chr12,chr12	+,-	PRH2,STYK1	257744,2852
chr14:39572166-39572383	chr14	+	39572286	39572364	True	NM_006364,NM_001009182	chr14,chr14	-,+	SEC23A,SIP1	123,11123
chr5:175395950-175397895	chr5	+	175396679	175397509	True	NM_032361,NM_001008220	chr5,chr5	-,+	THOC3,CPLX2	-1134,-98229
chr5:175395950-175397895	chr5	-	177300305	177301128	False	NR_003615,NM_173663	chr5,chr5	+,-	LOC728554,FAM153A	1133,-92800
chr11:93452196-93452407	chr11	+	93452275	93452388	True	NR_002569,NR_003028	chr11,chr11	+,-	SCARNA9,SNORA25	2291,11487
chr19:51817528-51818133	chr19	+	51817809	51818168	True	NM_001163922,NM_001101372	chr19,chr19	-,+	VSIG10L,IGLON5	27260,-2758
chr7:126992777-126994501	chr7	+	126992797	126994147	True	NM_001662,NM_176814	chr7,chr7	+,-	ARF5,ZNF800	234258,38682
chr3:52312974-52313203	chr3	+	52313008	52313248	True	NM_001144951,NM_025222,NR_026701,NR_026700,NR_026702,NM_145262,NR_026699	chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,-,+,+,+,+,+	GLYCTK,WDR82,GLYCTK,GLYCTK,GLYCTK,GLYCTK,GLYCTK	8587,-349,8587,8587,8587,8587,8587
chr10:99786846-99788237	chr10	+	99787032	99788260	True	NM_014472,NM_018058	chr10,chr10	+,-	C10orf28,CRTAC1	106120,2375
chr16:72130757-72132254	chr16	+	72130858	72131824	True	NM_001142317,NM_017853,NM_014003,NM_001142318	chr16,chr16,chr16,chr16	-,-,+,-	TXNL4B,TXNL4B,DHX38,TXNL4B	-3090,-3319,-3294,-2643
chr19:19728459-19728694	chr19	+	19728515	19728599	True	NM_025245,NM_033204	chr19,chr19	-,+	PBX4,ZNF101	890,51063
chr3:137480566-137480954	chr3	+	137480586	137480970	True	NM_001170538,NM_004189	chr3,chr3	-,+	DZIP1L,SOX14	351402,2163
chr18:11905722-11907288	chr18	+	11905760	11907169	True	NM_023075,NM_020412	chr18,chr18	-,+	MPPE1,CHMP1B	1522,-54422
chr15:59037996-59038691	chr15	+	59038047	59038691	True	NM_001040450,NM_001110	chr15,chr15	+,-	FAM63B,ADAM10	24701,3536
chr17:7198513-7198719	chr17	+	7198696	7198768	True	NM_001143760,NM_015982	chr17,chr17	+,-	EIF5A,YBX2	11549,-820
chr19:41284788-41285219	chr19	+	41284810	41285238	True	NR_037791,NM_198476,NM_016154,NR_037775,NM_001202553,NM_006533	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+	RAB4B-EGLN2,C19orf54,RAB4B,MIA-RAB4B,MIA,MIA	-737,-28982,-737,-3419,-3779,-3579
chr5:174869333-174869712	chr5	+	174869338	174869748	True	NM_022754,NM_000794	chr5,chr5	+,-	SFXN1,DRD1	35765,1465
chr2:91762057-91762596	chr2	+	91762062	91762484	True	NR_003503,NR_027238	chr2,chr2	+,-	GGT8P,LOC654342	200883,85541
chr6:2753530-2754744	chr6	+	2753529	2754645	True	NM_001012418,NM_020135	chr6,chr6	-,+	MYLK4,WRNIP1	-2375,11020
chr15:25427485-25429305	chr15	+	25427587	25429169	True	NR_003358,NR_003296,NR_003351,NR_003305,NR_003344,NR_003298,NR_003299,NM_130838,NR_003300,NR_003301,NR_003302,NR_003303,NR_003304,NR_003297,NR_003294,NR_003295	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,-,+,+,+,+,+,+,+,+	SNORD115-43,SNORD115-4,SNORD115-36,SNORD115-13,SNORD115-29,SNORD115-6,SNORD115-7,UBE3A,SNORD115-8,SNORD115-9,SNORD115-10,SNORD115-11,SNORD115-12,SNORD115-5,SNORD115-2,SNORD115-3	5391,-5659,5391,9298,5391,-1994,-106,221534,283,1608,1608,5391,1608,1611,-9856,-7564
chr12:53664579-53665593	chr12	+	53664606	53665582	True	NM_012291,NM_000966	chr12,chr12	+,-	ESPL1,RARG	-2574,-38570
chrX:70938198-70938408	chrX	+	70938257	70938449	True	NR_034005,NM_001145140,NM_001145139	chrX,chrX,chrX	+,-,-	FLJ46446,CXorf49,CXorf49B	-21262,-122,-122
chrX:70938198-70938408	chrX	-	70982825	70983017	False	NR_001568,NM_001145140,NM_001145139	chrX,chrX,chrX	-,+,+	BCYRN1,CXorf49,CXorf49B	-33863,122,122
chr14:53172984-53173632	chr14	+	53173302	53173661	True	NM_002806,NM_014584	chr14,chr14	+,-	PSMC6,ERO1L	234,-10883
chr2:32390942-32392235	chr2	+	32391002	32392129	True	NM_017964,NM_001193513,NM_001199138,NM_001193514,NM_001193515	chr2,chr2,chr2,chr2,chr2	+,+,-,+,+	SLC30A6,SLC30A6,NLRC4,SLC30A6,SLC30A6	-143,-143,97883,-143,-143
chr17:26993728-26994861	chr17	+	26994051	26994791	True	NM_006923,NM_003170	chr17,chr17	-,+	SDF2,SUPT6H	-5118,-4807
chr4:3374081-3374323	chr4	+	3374146	3374366	True	NM_002337,NM_198227	chr4,chr4	-,+	LRPAP1,RGS12	159908,-2473
chr12:53974370-53975654	chr12	+	53974560	53975512	True	NM_001130059,NM_134324	chr12,chr12	-,+	ATF7,TARBP2	19357,-79248
chr8:42623890-42624477	chr8	+	42623959	42624234	True	NM_001199279,NM_000749,NM_004198	chr8,chr8,chr8	-,+,-	CHRNA6,CHRNB3,CHRNA6	-30,-71448,-30
chr11:133734896-133735333	chr11	+	133735001	133735381	True	NM_174927,NR_027276	chr11,chr11	-,+	SPATA19,LOC100128239	-19609,166785
chr11:65230828-65231678	chr11	+	65230853	65231599	True	NR_030343,NM_182556	chr11,chr11	+,-	MIR612,SLC25A45	-18982,-80711
chr15:66792215-66792420	chr3	+	185135546	185135596	True	NM_080652,NM_004721	chr3,chr3	-,+	TMEM41A,MAP3K13	81299,-54627
chr19:11266246-11268149	chr19	+	11266439	11267453	True	NM_001195803,NM_182513	chr19,chr19	+,-	LDLR,SPC24	-66452,45
chr10:50970319-50971739	chr10	+	50970568	50971778	True	NM_001143997,NM_001143996,NM_182554,NM_018245	chr10,chr10,chr10,chr10	-,-,+,-	OGDHL,OGDHL,C10orf53,OGDHL	-143,-143,-82935,-143
chr6:128824226-128825743	chr6	+	128824485	128825745	True	NM_002844,NM_000426	chr6,chr6	-,+	PTPRK,LAMA2	16124,378540
chr21:45575660-45577320	chr21	+	45575680	45577158	True	NM_198155,NM_015259	chr21,chr21	+,-	C21orf33,ICOSLG	-22237,83726
chrX:46620438-46621297	chrX	+	46620644	46621320	True	NM_032591,NM_006915	chrX,chrX	-,+	SLC9A7,RP2	-2172,75026
chr2:232376778-232377926	chr2	+	232377016	232377822	True	NR_024079,NM_152614	chr2,chr2	-,+	C2orf52,C2orf57	1286,79752
chr12:29617459-29619016	chr12	+	29617533	29618627	True	NM_018099,NM_183378	chr12,chr12	+,-	FAR2,OVCH1	-240988,32044
chrX:106093886-106094339	chrX	+	106093885	106094345	True	NM_017752,NM_001171706	chrX,chrX	+,-	TBC1D8B,RIPPLY1	-48019,52266
chr1:223897900-223899548	chr1	+	223898070	223899166	True	NM_001143962,NM_001146068,NM_001748	chr1,chr1,chr1	-,+,+	CAPN8,CAPN2,CAPN2	-44634,-8826,952
chr3:23990710-23992487	chr3	+	23990994	23992257	True	NM_001145425,NM_005126,NM_020345	chr3,chr3,chr3	+,+,-	NR1D2,NR1D2,NKIRAS1	-3434,-4295,-32457
chr8:22018039-22018547	chr8	+	22018273	22018443	True	NM_139278,NM_001199,NM_001172357,NR_033403,NR_033404,NM_001172410,NM_006129,NM_003018	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,+,+,+,+,+,+,+	LGI3,BMP1,SFTPC,BMP1,BMP1,SFTPC,BMP1,SFTPC	-3929,4209,740,4209,4209,740,4209,740
chr3:108672511-108674294	chr3	+	108672533	108674060	True	NM_005459,NM_016388	chr3,chr3	-,+	GUCA1C,TRAT1	14,-130953
chr14:97400914-97401356	chr14	+	97400959	97401331	True	NM_003384,NM_018036	chr14,chr14	+,-	VRK1,ATG2B	-137326,-571281
chr10:27233519-27234973	chr10	+	27233559	27234790	True	NR_026795,NM_001172303	chr10,chr10	-,+	NCRNA00202,MASTL	-2629,208962
chr20:61845943-61846544	chr20	+	61846276	61846546	True	NM_022161,NM_017798	chr20,chr20	+,-	BIRC7,YTHDF1	20729,1042
chr17:4701531-4702750	chr17	+	4701658	4702360	True	NM_002798,NM_002663,NM_001014985,NM_182566	chr17,chr17,chr17,chr17	+,+,+,-	PSMB6,PLD2,GLTPD2,VMO1	-2252,8060,-9455,-11929
chr4:158141752-158141971	chr4	+	158141885	158141981	True	NM_001083619,NM_000826,NR_036641,NM_001083620	chr4,chr4,chr4,chr4	+,+,-,+	GRIA2,GRIA2,PDGFC,GRIA2	-200,-200,-249339,-116
chr14:45432112-45432724	chr14	+	45432151	45432729	True	NM_017658,NM_015091	chr14,chr14	-,+	KLHL28,FAM179B	-972,-786
chr15:83734973-83735342	chr15	+	83735206	83735368	True	NM_001011885,NM_001144903,NM_025238	chr15,chr15,chr15	-,+,-	BTBD1,TM6SF1,BTBD1	788,40955,788
chr20:1247372-1247922	chr20	+	1247467	1247852	True	NM_014723,NM_015685	chr20,chr20	+,-	SNPH,SDCBP2	-558,46515
chr1:115880239-115880439	chr1	+	115880242	115880488	True	NM_002506,NM_001172411	chr1,chr1	-,+	NGF,VANGL1	419,304085
chr22:32153840-32154778	chr22	+	32154065	32154663	True	NM_001007188,NM_014662,NM_001136029,NM_173566	chr22,chr22,chr22,chr22	+,+,+,-	DEPDC5,DEPDC5,DEPDC5,PRR14L	-4054,-4054,-3270,-7945
chr1:67595115-67596447	chr1	+	67595257	67596155	True	NM_001013674,NM_144701	chr1,chr1	-,+	C1orf141,IL23R	-1037,36013
chr15:50981633-50982793	chr15	+	50981713	50982802	True	NM_017672,NM_007347	chr15,chr15	-,+	TRPM7,AP4E1	-2701,218143
chr17:36605681-36606401	chr17	+	36605710	36606278	True	NM_001004334,NM_001199417	chr17,chr17	-,+	GPR179,ARHGAP23	-106017,-21041
chr8:21916103-21916883	chr8	+	21916177	21916879	True	NM_001978,NM_024815,NM_001114135,NM_001114137,NM_001114136,NM_001114139,NM_001114138	chr8,chr8,chr8,chr8,chr8,chr8,chr8	+,-,+,+,+,+,+	EPB49,NUDT18,EPB49,EPB49,EPB49,EPB49,EPB49	80,50103,-852,-5147,-3900,-3900,80
chr9:32525555-32526113	chr9	+	32525572	32526128	True	NM_014314,NR_033991	chr9,chr9	-,+	DDX58,LOC100129250	244,25013
chr22:30474895-30475586	chr22	+	30474899	30475485	True	NM_152510,NM_002309	chr22,chr22	+,-	HORMAD2,LIF	967,167361
chr8:125554450-125555363	chr8	+	125554638	125555384	True	NM_001146160,NR_027427,NM_005005,NM_032026	chr8,chr8,chr8,chr8	-,-,+,-	TATDN1,TATDN1,NDUFB9,TATDN1	-3309,-3309,-3346,-3309
chr6:131483281-131483916	chr6	+	131483363	131483955	True	NM_001431,NM_016377	chr6,chr6	-,+	EPB41L2,AKAP7	-98901,-16953
chr3:99381530-99381788	chr3	+	99381530	99381843	True	NM_020351,NM_014890	chr3,chr3	+,-	COL8A1,FILIP1L	-24127,213260
chr5:34181419-34182068	chr5	+	34181473	34181527	True	NM_016568,NR_037951	chr5,chr5	+,-	RXFP3,C1QTNF3-AMACR	-245033,-56840
chr11:62886529-62886930	chr11	+	62886674	62886970	True	NM_001039752,NM_001136506	chr11,chr11	+,-	SLC22A10,SLC22A24	170459,24774
chr15:25468932-25469653	chr15	+	25469179	25469602	True	NR_003358,NR_003496,NR_003497,NR_003346,NR_003344,NR_003345,NR_003351,NR_003347,NM_130838,NR_003342,NR_003343,NR_003303,NR_003348,NR_003349,NR_003350	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,-,+,+,+,+,+,+	SNORD115-43,HBII-52-27,HBII-52-28,SNORD115-31,SNORD115-29,SNORD115-30,SNORD115-36,SNORD115-32,UBE3A,SNORD115-25,SNORD115-26,SNORD115-11,SNORD115-33,SNORD115-34,SNORD115-35	-837,-3580,-1729,2653,-837,747,-837,4511,181102,-8542,-5466,-837,6382,7931,9791
chr8:144658853-144659230	chr8	+	144658859	144659137	True	NM_145201,NM_024736,NM_001100878	chr8,chr8,chr8	-,+,-	NAPRT1,GSDMD,C8orf73	1426,-18433,-3931
chr4:49320229-49320823	chr4	+	49320623	49320705	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-332409,-411808
chr4:49320229-49320823	chr4	-	49298717	49298777	False	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-310513,-389902
chr4:49320229-49320823	chr4	-	49304853	49304935	False	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-316649,-396038
chr2:219858152-219858445	chr2	+	219858347	219858415	True	NM_057093,NM_057094,NM_017521,NR_024385,NR_029867,NM_005209	chr2,chr2,chr2,chr2,chr2,chr2	-,-,-,+,-,-	CRYBA2,CRYBA2,FEV,LOC151300,MIR375,CRYBA2	-220,-220,-7968,-17392,8065,-226
chr20:4703424-4703634	chr20	+	4703444	4703574	True	NR_024267,NM_012409	chr20,chr20	-,+	PRNT,PRND	17790,-939
chr16:31229227-31230626	chr16	+	31229305	31230370	True	NM_001008274,NM_152901	chr16,chr16	+,-	TRIM72,PYDC1	-4014,-910
chr2:189153744-189154495	chr2	+	189153924	189154540	True	NR_030287,NM_052952,NM_016315	chr2,chr2,chr2	+,-,+	MIR561,DIRC1,GULP1	7678,500344,2849
chrX:7066747-7068555	chrX	+	7066864	7068109	True	NM_012080,NM_001135565,NM_000351,NM_001178136,NM_001178135	chrX,chrX,chrX,chrX,chrX	-,-,+,-,-	HDHD1,HDHD1,STS,HDHD1,HDHD1	-633,-633,69362,-633,-633
chr5:131395105-131395652	chr5	+	131395272	131395638	True	NM_000588,NM_001205250	chr5,chr5	+,-	IL3,ACSL6	708,-47511
chr17:6946525-6946804	chr17	+	6946528	6946778	True	NM_201566,NM_153357	chr17,chr17	+,-	SLC16A13,SLC16A11	-7185,514
chr12:101187955-101188386	chr12	+	101187980	101188415	True	NM_145913,NM_178826	chr12,chr12	-,+	SLC5A8,ANO4	415652,-13
chr19:17489760-17489992	chr19	+	17489765	17490039	True	NM_138401,NM_031310	chr19,chr19	+,-	FAM125A,PLVAP	40872,-1628
chr1:46091025-46092503	chr1	+	46091304	46092493	True	NM_001190182,NM_001114938,NM_152298	chr1,chr1,chr1	-,-,+	CCDC17,CCDC17,NASP	-1573,-1573,-41695
chr17:11903172-11903701	chr17	+	11903176	11903732	True	NM_144680,NM_003010	chr17,chr17	-,+	ZNF18,MAP2K4	-2487,20402
chr11:33256122-33257348	chr11	+	33256304	33256957	True	NM_001033506,NM_001048200	chr11,chr11	-,+	CSTF3,HIPK3	-73267,22210
chr21:46790971-46792723	chr21	+	46791054	46792270	True	NM_130445,NR_028082	chr21,chr21	+,-	COL18A1,NCRNA00175	32826,52743
chr17:47788800-47789226	chr17	+	47788836	47789231	True	NM_005827,NM_001199155	chr17,chr17	-,+	SLC35B1,MYST2	-3554,76749
chr1:203696671-203697839	chr1	+	203696678	203697624	True	NR_027902,NR_003019	chr1,chr1	-,+	C1orf157,SNORA77	312818,1084
chr6:3260840-3262265	chr6	+	3260847	3262157	True	NM_178012,NM_001135750,NM_001128591,NM_001128592	chr6,chr6,chr6,chr6	-,+,+,+	TUBB2B,PSMG4,PSMG4,PSMG4	-32879,-1736,-1736,-1736
chr8:117766643-117767633	chr8	+	117766694	117767609	True	NM_003756,NM_032334	chr8,chr8	-,+	EIF3H,UTP23	503,11132
chr13:50361974-50362575	chr13	+	50362109	50362579	True	NM_002267,NR_003268	chr13,chr13	-,+	KPNA3,CTAGE10P	4535,101965
chr1:27342489-27343616	chr1	+	27342777	27343289	True	NM_052943,NM_001013642	chr1,chr1	-,+	FAM46B,TRNP1	-3444,-22634
chr19:16057026-16058621	chr19	+	16057247	16058659	True	NM_001004465,NM_021187	chr19,chr19	+,-	OR10H4,CYP4F11	1158,-11571
chrY:6116489-6118419	chrY	+	6117313	6117951	True	NM_022573,NR_001540,NR_003593	chrY,chrY,chrY	+,-,-	TSPY2,TTTY23,TTTY23B	-3100,-5662,-5662
chr1:179714160-179714509	chr1	+	179714172	179714558	True	NM_173509,NM_001199260	chr1,chr1	+,-	FAM163A,TOR1AIP2	-1932,132433
chr17:72744067-72744319	chr17	+	72744070	72744142	True	NM_004252,NM_015654,NR_037409	chr17,chr17,chr17	+,-,+	SLC9A3R1,NAT9,MIR3615	620,28378,609
chr17:47488718-47489888	chr17	+	47488889	47489797	True	NM_002634,NM_002507	chr17,chr17	-,+	PHB,NGFR	2495,82857
chr20:5109621-5110247	chr20	+	5109643	5109873	True	NM_182649,NM_003818,NR_028370,NM_002592	chr20,chr20,chr20,chr20	-,+,+,-	PCNA,CDS2,PCNA-AS1,PCNA	-8996,-2215,-9465,-2375
chr1:6842883-6843382	chr1	+	6842993	6843434	True	NM_001195563,NM_018198,NM_015215	chr1,chr1,chr1	+,-,+	CAMTA1,DNAJC11,CAMTA1	1949,-81027,1949
chr1:46666788-46667091	chr1	+	46666819	46667100	True	NM_001013615,NM_017739	chr1,chr1	+,-	C1orf190,POMGNT1	1905,-2698
chr7:103628048-103629176	chr7	+	103628054	103629019	True	NM_005045,NM_173054,NM_199000	chr7,chr7,chr7	-,-,+	RELN,RELN,LHFPL3	994,994,340084
chr19:3883100-3883444	chr19	+	3883401	3883483	True	NM_001145640,NM_033064	chr19,chr19	-,+	ZFR2,ATCAY	-14374,-2834
chr1:19972391-19972952	chr1	+	19972401	19972881	True	NM_001204085,NM_001204084,NM_181719,NM_001204086,NM_182744,NM_005380	chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,+,+,+	NBL1,NBL1,TMCO4,NBL1,NBL1,NBL1	-586,-2244,153579,-192,-2729,-1645
chr19:19006618-19006970	chr19	+	19006621	19006939	True	NM_198207,NM_021267,NM_019070,NM_001492	chr19,chr19,chr19,chr19	-,-,+,-	LASS1,LASS1,DDX49,GDF1	64,64,23544,64
chr8:142144553-142145056	chr8	+	142144722	142144902	True	NM_001080431,NM_014957	chr8,chr8	-,+	SLC45A4,DENND3	93821,-6066
chr1:47571073-47571863	chr1	+	47571100	47571904	True	NM_005764,NM_001010969	chr1,chr1	-,+	PDZK1IP1,CYP4A22	83917,31202
chr1:47571073-47571863	chr1	-	47327379	47327429	False	NM_001099772,NR_002788	chr1,chr1	+,-	CYP4B1,CYP4Z2P	-62760,38768
chr11:64792165-64792392	chr11	+	64792203	64792387	True	NM_013306,NM_147777,NM_138456	chr11,chr11,chr11	+,+,-	SNX15,SNX15,BATF2	2492,2492,-27686
chrX:18707998-18708288	chrX	+	18708044	18708270	True	NM_000330,NM_152224,NM_152226,NM_006240	chrX,chrX,chrX,chrX	-,+,+,+	RS1,PPEF1,PPEF1,PPEF1	-17821,774,774,774
chr11:72982320-72982567	chr11	+	72982335	72982595	True	NM_014824,NM_176797,NM_176796,NM_004154,NM_176798	chr11,chr11,chr11,chr11,chr11	-,+,+,+,+	FCHSD2,P2RY6,P2RY6,P2RY6,P2RY6	-129192,-6816,-6816,651,-1447
chr2:19558577-19558792	chr2	+	19558634	19558758	True	NM_145260,NR_033875	chr2,chr2	-,+	OSR1,FLJ12334	-262,509856
chr1:114506110-114506557	chr1	+	114506352	114506598	True	NM_181358,NM_006594	chr1,chr1	+,-	HIPK1,AP4B1	-9904,-58611
chr4:186347118-186347360	chr4	+	186347130	186347350	True	NR_028085,NM_001114357,NM_018359	chr4,chr4,chr4	-,+,-	UFSP2,C4orf47,UFSP2	9,3194,9
chr17:34327108-34328590	chr17	+	34327522	34328424	True	NR_027922,NM_002988,NR_027921,NM_032965	chr17,chr17,chr17,chr17	-,+,-,-	CCL14-CCL15,CCL18,CCL14-CCL15,CCL15	710,63218,710,710
chr1:15785816-15786086	chr1	+	15785939	15786137	True	NM_033440,NM_001229	chr1,chr1	+,-	CELA2A,CASP9	-2769,64855
chr9:141109113-141109741	chr7	-	33304	33451	False	NM_002607,NM_020223	chr7,chr7	-,+	PDGFA,FAM20C	526089,159517
chr9:141109113-141109741	chr3	+	197881888	197882295	False	NR_003291	chr3	-	LOC348840	-74346
chr9:141109113-141109741	chr16	+	90170719	90170866	False	NM_001098173,NR_023348	chr16,chr16	-,+	PRDM7,GAS8	-28381,-81771
chr9:141109113-141109741	chr9	+	141109129	141109781	True	NM_032937	chr9	-	C9orf37	-595821
chr17:18525385-18527150	chr17	+	18525947	18527000	True	NR_036647,NM_001037330	chr17,chr17	-,+	CCDC144B,TRIM16L	1987,98401
chr17:18525385-18527150	chr17	-	16595175	16595898	False	NM_020787,NM_014695	chr17,chr17	-,+	ZNF624,CCDC144A	-38008,-1597
chr17:18525385-18527150	chr17	+	20797516	20797727	False	NM_001004306,NM_015510	chr17,chr17	-,+	CCDC144NL,DHRS7B	1777,232530
chr17:18525385-18527150	chr17	-	20226377	20226857	False	NM_001042685,NR_023380	chr17,chr17	-,+	LGALS9B,CCDC144C	144043,-1951
chr11:72379625-72380686	chr11	+	72379671	72380603	True	NM_033388,NM_001146209,NM_002599	chr11,chr11,chr11	+,-,-	ATG16L2,PDE2A,PDE2A	144847,-93,4941
chr16:11836889-11837131	chr16	+	11836977	11837071	True	NM_003498,NM_015914	chr16,chr16	+,-	SNN,TXNDC11	-74739,-329
chr3:139187278-139188177	chr3	+	139187349	139188083	True	NM_004164,NM_020191	chr3,chr3	-,+	RBP2,MRPS22	7331,-124539
chr4:115557571-115558494	chr4	+	115557571	115558352	True	NM_022569,NM_003360	chr4,chr4	-,+	NDST4,UGT8	476730,-14107
chr16:84853040-84853378	chr16	+	84853090	84853356	True	NM_001145548,NM_031476	chr16,chr16	-,+	ZDHHC7,CRISPLD2	191835,230
chr15:58448289-58449934	chr15	+	58448391	58449972	True	NM_020980,NM_170696	chr15,chr15	+,-	AQP9,ALDH1A2	-18041,-90485
chr17:9549360-9549573	chr17	+	9549378	9549622	True	NM_153210,NR_033656	chr17,chr17	+,-	USP43,STX8	-479,-70103
chr19:35263820-35264117	chr19	+	35263862	35264126	True	NM_001007248,NM_001145665	chr19,chr19	-,+	ZNF599,ZNF181	58,-38433
chr2:233402578-233404332	chr2	+	233402920	233404311	True	NM_005199,NM_145702	chr2,chr2	+,-	CHRNG,TIGD1	125,10965
chr11:64811883-64812882	chr11	+	64812068	64812920	True	NM_005468,NM_013299	chr11,chr11	-,+	NAALADL1,SAC3D1	13139,-3743
chr1:179050809-179051010	chr1	+	179050814	179050998	True	NM_022371,NM_001136000	chr1,chr1	+,-	TOR3A,ABL2	113,61276
chr5:148725237-148725466	chr5	+	148725344	148725438	True	NM_152407,NM_014443	chr5,chr5	+,-	GRPEL2,IL17B	-418,33450
chr9:6411673-6411919	chr9	+	6411673	6411877	True	NM_000170,NM_152896	chr9,chr9	-,+	GLDC,UHRF2	233871,1273
chr16:28621404-28623258	chr16	+	28621469	28622771	True	NM_177529,NM_138414,NM_001055,NM_177530,NM_177534	chr16,chr16,chr16,chr16,chr16	-,+,-,-,-	SULT1A1,CCDC101,SULT1A1,SULT1A1,SULT1A1	-112,-56271,-112,-820,-820
chr19:54601573-54601939	chr19	+	54601704	54601766	True	NM_133169,NM_133168,NM_130771,NM_004542,NM_206818	chr19,chr19,chr19,chr19,chr19	-,-,-,+,-	OSCAR,OSCAR,OSCAR,NDUFA3,OSCAR	2432,2432,2432,4393,2432
chr16:66613305-66613568	chr16	+	66613341	66613531	True	NM_144673,NM_001199317,NM_004614	chr16,chr16,chr16	+,+,-	CMTM2,CMTM2,TK2	-41,-41,-29026
chr19:34395852-34396275	chr19	+	34396020	34396276	True	NM_001166057,NM_024076	chr19,chr19	-,+	PEPD,KCTD15	-383221,-108320
chr7:132745994-132747567	chr7	+	132746163	132747473	True	NM_001037126,NM_017812	chr7,chr7	+,-	EXOC4,CHCHD3	190349,19405
chr19:504936-505402	chr19	+	505073	505385	True	NM_033513,NM_130762,NM_182577,NM_130760	chr19,chr19,chr19,chr19	+,+,-,+	C19orf20,MADCAM1,ODF3L2,MADCAM1	2111,-8635,-30090,-8635
chr10:35427128-35427610	chr10	+	35427127	35427441	True	NM_001198777,NM_183012,NM_183011	chr10,chr10,chr10	-,+,+	CUL2,CREM,CREM	-47557,-469,-469
chr5:34930616-34931172	chr5	+	34930692	34931173	True	NM_194283,NM_002853,NM_001012339	chr5,chr5,chr5	+,-,+	DNAJC21,RAD1,DNAJC21	-1052,-14912,-1052
chr1:44496990-44497692	chr1	+	44497158	44497718	True	NM_001024845,NM_152499	chr1,chr1	-,+	SLC6A9,CCDC24	-24,-39929
chr16:30676991-30677846	chr16	+	30677077	30677575	True	NM_138447,NM_001105079	chr16,chr16	-,+	ZNF689,FBRS	-55395,-1350
chr19:56886493-56887423	chr19	+	56886550	56887405	True	NR_003127,NM_144690,NR_024057,NR_024056,NR_024055,NR_033418	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+	ZNF542,ZNF582,ZNF542,ZNF542,ZNF542,ZNF542	-7133,17535,-7111,-7111,-7111,-7111
chr7:99935606-99935884	chr7	+	99935849	99935931	True	NR_036570,NR_003613,NR_036569	chr7,chr7,chr7	+,-,+	PILRB,PMS2P1,PILRB	-2212,-1919,-2212
chr1:4040924-4041531	chr1	+	4040937	4041563	True	NR_024455,NM_207356	chr1,chr1	+,-	LOC100133612,C1orf174	-224020,-224080
chr16:332080-332380	chr16	+	332094	332382	True	NM_183337,NM_006849,NM_001176,NM_003834	chr16,chr16,chr16,chr16	-,+,+,-	RGS11,PDIA2,ARHGDIG,RGS11	-6180,735,-1539,-6180
chr2:230785193-230785928	chr2	+	230785242	230785847	True	NM_174899,NM_004238	chr2,chr2	+,-	FBXO36,TRIP12	1359,859
chrX:53452126-53452696	chrX	+	53452139	53452718	True	NM_001037811,NM_006306,NM_001031745,NM_004493,NM_144968	chrX,chrX,chrX,chrX,chrX	-,-,+,-,+	HSD17B10,SMC1A,RIBC1,HSD17B10,RIBC1	8655,-2521,-2300,8655,-2351
chr3:196695081-196695341	chr3	+	196695084	196695324	True	NR_024388,NM_025163	chr3,chr3	+,-	LOC152217,PIGZ	-25641,430
chr7:64755120-64755610	chr7	+	64755236	64755415	True	NM_001007253,NM_007139	chr7,chr7	-,+	ERV3,ZNF92	-288112,83352
chr1:115202534-115203453	chr1	+	115202706	115203461	True	NM_003176,NM_198459	chr1,chr1	+,-	SYCP1,DENND2C	193993,9321
chr1:51702521-51703833	chr1	+	51702858	51703781	True	NM_001080494,NM_014372	chr1,chr1	-,+	TTC39A,RNF11	84207,-965
chr8:42246754-42247499	chr8	+	42246899	42247414	True	NM_014420,NM_001135694,NM_005662	chr8,chr8,chr8	-,+,+	DKK4,VDAC3,VDAC3	-12225,1931,1931
chr10:124131408-124132199	chr10	+	124131477	124132205	True	NM_001001974,NM_001010912	chr10,chr10	+,-	PLEKHA1,C10orf120	1888,327183
chr11:94732300-94732987	chr11	+	94732370	94732991	True	NM_001161630,NM_016403,NM_018039	chr11,chr11,chr11	+,-,+	KDM4DL,CWC15,KDM4D	25430,-25594,-25583
chr1:11716236-11716658	chr1	+	11716237	11716331	True	NM_001014765,NM_018438,NM_012168,NM_033182,NM_183412,NM_183413	chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,+,+,+	FBXO44,FBXO6,FBXO2,FBXO44,FBXO44,FBXO44	-1376,7818,-1349,-1376,-1858,-1376
chr9:101706558-101706948	chr9	+	101706581	101706961	True	NM_173551,NM_001855	chr9,chr9	-,+	ANKS6,COL15A1	-147787,-494
chr11:126042680-126043768	chr11	+	126042861	126043511	True	NM_001144827,NM_024556	chr11,chr11	-,+	RPUSD4,FAM118B	38126,38107
chr3:13692969-13693617	chr3	+	13692971	13693627	True	NM_004625,NR_027103	chr3,chr3	-,+	WNT7A,LOC285375	228041,-801
chr14:76617172-76618074	chr14	+	76617244	76618000	True	NM_017972,NM_003239,NM_017926	chr14,chr14,chr14	+,-,+	C14orf118,TGFB3,C14orf118	258,-169152,258
chr4:683525-684057	chr4	+	683526	684062	True	NM_002477,NM_032219	chr4,chr4	+,-	MYL5,MFSD7	-11866,-553
chr12:120032520-120032749	chr12	+	120032531	120032663	True	NR_031589,NM_001136534	chr12,chr12	-,+	MIR1178,TMEM233	118916,-1318
chr1:84961307-84962645	chr1	+	84961307	84962480	True	NR_036561,NM_005274	chr1,chr1	+,-	SPATA1,GNG5	9493,9839
chr11:64861596-64862498	chr11	+	64861782	64862330	True	NM_013265,NM_080668	chr11,chr11	+,-	C11orf2,CDCA5	1352,-10167
chr11:86120584-86121283	chr11	+	86120805	86121299	True	NM_001014811,NM_021827	chr11,chr11	-,+	ME3,CCDC81	262001,-35079
chr7:65292209-65292723	chr7	+	65292335	65292667	True	NM_000181,NM_173517	chr7,chr7	-,+	GUSB,VKORC1L1	154684,45589
chr1:15571113-15572226	chr1	+	15571151	15572275	True	NM_052929,NR_027136	chr1,chr1	+,-	FHAD1,C1orf126	1492,-92191
chr22:45149607-45150538	chr22	+	45149760	45150584	True	NM_138415,NM_181335,NM_001198726,NM_001017526,NM_032287	chr22,chr22,chr22,chr22,chr22	-,+,+,+,-	PHF21B,ARHGAP8,ARHGAP8,ARHGAP8,LDOC1L	255047,-1373,-1373,-1373,-255755
chr4:153282972-153283682	chr4	+	153283208	153283396	True	NR_033797,NM_018315	chr4,chr4	+,-	DKFZP434I0714,FBXW7	174019,-9098
chr19:56343404-56343642	chr19	+	56343409	56343573	True	NM_145007,NM_134444	chr19,chr19	-,+	NLRP11,NLRP4	4605,4370
chr11:77346555-77347406	chr11	+	77346725	77347454	True	NM_173039,NM_001293	chr11,chr11	+,-	AQP11,CLNS1A	-46106,1447
chr4:1242801-1243015	chr4	+	1242861	1243035	True	NM_001012614,NR_033339,NM_001328	chr4,chr4,chr4	-,+,-	CTBP1,C4orf42,CTBP1	-37,192,-37
chr4:57535984-57536882	chr4	+	57535988	57536845	True	NM_001145460,NM_206919	chr4,chr4	-,+	HOPX,ARL9	11084,-164664
chrX:102318625-102319010	chrX	+	102318679	102318850	True	NM_018476,NM_001031834	chrX,chrX	-,+	BEX1,RAB40AL	368,-126530
chr17:16343698-16344023	chr17	+	16343740	16343821	True	NR_027178,NR_027176,NR_027166,NR_027167,NR_027164,NR_027165,NR_003043,NR_027163,NR_027160,NR_027161,NR_027168,NR_027169,NR_027667,NR_027158,NR_027162,NR_003054,NR_027175,NR_027174,NR_027177,NR_002744,NR_027171,NR_027170,NR_027173,NR_027172,NR_027179,NR_027159,NM_001113567	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,-	NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,SNORD49B,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,SNORD65,NCRNA00188,NCRNA00188,NCRNA00188,SNORD49A,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,C17orf76	-1490,-1490,-1490,-1490,-1490,-1490,-968,-1490,-1490,-1490,-1490,-1490,-1490,-1490,-1490,718,-1490,-1490,-1490,-441,-1490,-1490,-1490,-1490,-1490,-1490,51710
chr5:131822679-131822962	chr5	+	131822723	131822987	True	NM_005732,NM_002198	chr5,chr5	+,-	RAD50,IRF1	69628,3528
chr19:14587014-14587516	chr19	+	14587063	14587129	True	NM_000955,NM_001146693	chr19,chr19	-,+	PTGER1,LOC100130932	-889,12628
chr11:6461481-6462389	chr11	+	6461549	6462338	True	NM_012192,NM_000613	chr11,chr11	+,-	FXC1,HPX	40338,-34
chr9:99775154-99775454	chr9	+	99775206	99775407	True	NM_001045477,NR_002894	chr9,chr9	+,-	FAM22G,HIATL2	-83978,512
chr9:99775154-99775454	chr9	-	97137343	97137544	False	NM_017561,NM_032558	chr9,chr9	-,+	FAM22F,HIATL1	-46417,-568
chr1:28052875-28054477	chr1	+	28053069	28053930	True	NM_152660,NM_022873,NM_001143915,NM_001143914,NM_001143913,NM_001143912	chr1,chr1,chr1,chr1,chr1,chr1	+,-,+,+,+,+	FAM76A,IFI6,FAM76A,FAM76A,FAM76A,FAM76A	-630,-54345,-630,-630,-630,-630
chr18:31802694-31802906	chr18	+	31802721	31802955	True	NM_001198548,NM_001392,NM_001198546,NM_001198547,NM_003787,NR_036752	chr18,chr18,chr18,chr18,chr18,chr18	-,+,-,-,-,-	NOL4,DTNA,NOL4,NOL4,NOL4,NOL4	610,270298,610,-287,610,-287
chr2:158860850-158862283	chr2	+	158861047	158862268	True	NM_001111067,NM_001135098	chr2,chr2	-,+	ACVR1,UPP2	-128673,-9407
chr13:52701974-52702458	chr13	+	52701976	52702415	True	NM_199289,NM_021645	chr13,chr13	-,+	NEK5,UTP14C	856,-103206
chr6:37014595-37015257	chr6	+	37014601	37015271	True	NM_173558,NM_014341	chr6,chr6	+,-	FGD2,MTCH1	-41229,-60652
chr2:242831162-242832299	chr2	+	242831217	242832285	True	NM_173821,NM_005018	chr2,chr2	+,-	C2orf85,PDCD1	-19390,-30159
chr17:39203619-39204319	chr17	+	39203619	39204095	True	NM_033032,NM_001123387,NM_030967,NM_033061	chr17,chr17,chr17,chr17	-,-,-,+	KRTAP2-2,KRTAP2-1,KRTAP1-1,KRTAP4-7	7426,-51,-5906,36363
chr2:40737712-40739477	chr2	+	40737744	40739494	True	NM_001112802,NM_152390	chr2,chr2	-,+	SLC8A1,TMEM178	132,-844767
chr4:128580820-128581327	chr4	+	128580819	128581328	True	NM_152778,NM_015693	chr4,chr4	-,+	MFSD8,INTU	305861,-26784
chr19:53101882-53102439	chr19	+	53102154	53102288	True	NR_023311,NM_001105549	chr19,chr19	+,-	ZNF137P,ZNF83	-2272,39413
chr13:35566631-35566968	chr13	+	35566675	35566748	True	NM_005584,NM_015678	chr13,chr13	-,+	MAB21L1,NBEA	484137,-50307
chr1:11073242-11073945	chr1	+	11073325	11073955	True	NM_007375,NM_001170754	chr1,chr1	+,-	TARDBP,C1orf127	-697,-31231
chr16:67426747-67427103	chr16	+	67426889	67427085	True	NM_016140,NM_015964,NM_000196	chr16,chr16,chr16	-,-,+	TPPP3,TPPP3,HSD11B2	386,386,37950
chr13:52485686-52485957	chr13	+	52485690	52485906	True	NR_027048,NM_031290	chr13,chr13	-,+	NCRNA00282,CCDC70	-66404,-49624
chr15:75314071-75314931	chr15	+	75314355	75314964	True	NM_017793,NM_021823	chr15,chr15	-,+	RPP25,PPCDC	-64580,962
chr22:50681901-50682255	chr22	+	50682109	50682303	True	NM_032019,NM_031454,NM_001159286,NM_020461	chr22,chr22,chr22,chr22	-,+,-,-	HDAC10,SELO,HDAC10,TUBGCP6	7581,-42754,7581,1147
chr9:34523990-34524937	chr9	+	34524013	34524965	True	NR_024369,NM_198573	chr9,chr9	+,-	LOC415056,ENHO	43044,-976
chr16:4665916-4666212	chr16	+	4665958	4666234	True	NM_001142289,NM_001142291,NM_001142290,NM_145253,NM_015246	chr16,chr16,chr16,chr16,chr16	+,+,+,-,+	MGRN1,MGRN1,MGRN1,FAM100A,MGRN1	8591,8591,8591,-1031,8591
chr3:52811959-52812375	chr3	+	52812003	52812399	True	NM_003157,NM_001166436,NM_001166435,NM_002215,NM_001193533,NM_001166434	chr3,chr3,chr3,chr3,chr3,chr3	-,+,+,+,-,+	NEK4,ITIH1,ITIH1,ITIH1,NEK4,ITIH1	-7038,1537,1537,-446,-7038,123
chr12:56512157-56512393	chr12	+	56512256	56512432	True	NM_001130420,NM_021104,NM_001184796,NM_015292,NM_032786,NM_001035267	chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,+,+,+	SMARCC2,RPL41,ESYT1,ESYT1,ZC3H10,RPL41	70969,-1933,9553,9553,-277,-1933
chr21:46012217-46012452	chr21	+	46012315	46012453	True	NM_198689,NM_198688	chr21,chr21	+,-	KRTAP10-7,KRTAP10-6	8043,-3
chr1:22964968-22965338	chr1	+	22964967	22965317	True	NR_036214,NM_172369,NM_015991,NM_001114101	chr1,chr1,chr1,chr1	-,+,+,+	MIR4253,C1QC,C1QA,C1QC	224452,4800,-1900,4800
chr3:195382093-195383548	chr3	+	195382851	195383525	True	NM_001647,NR_003265	chr3,chr3	-,+	APOD,SDHAP2	-71775,1384
chr2:74403813-74404307	chr2	+	74404011	74404184	True	NM_018221,NM_006636	chr2,chr2	-,+	MOBKL1B,MTHFD2	1866,21505
chr10:43050348-43050879	chr10	+	43050767	43050919	True	NR_026827,NR_026777	chr10,chr10	+,-	LOC84856,ZNF37BP	-79888,-2487
chr2:20730136-20730559	chr2	+	20730176	20730390	True	NM_022460,NM_004040	chr2,chr2	-,+	HS1BP3,RHOB	120524,-83392
chr10:50815501-50816556	chr10	+	50815714	50816582	True	NM_000124,NM_020984,NM_001142934,NM_001142933,NM_001142929,NM_020549,NM_003055,NM_020985,NM_020986	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,+,+,+,+,+,+,+,+	ERCC6,CHAT,CHAT,CHAT,CHAT,CHAT,SLC18A3,CHAT,CHAT	-68567,558,5500,5500,5500,5500,1764,4571,4571
chr1:15736549-15736792	chr1	+	15736614	15736794	True	NM_024329,NM_001229	chr1,chr1	+,-	EFHD2,CASP9	-274,114196
chr7:121517270-121519019	chr7	+	121517278	121519050	True	NM_002851,NM_005763	chr7,chr7	+,-	PTPRZ1,AASS	-4177,265344
chr17:1391684-1391897	chr17	+	1391756	1391848	True	NM_001080779,NM_001080950,NR_028514,NM_033375	chr17,chr17,chr17,chr17	-,-,+,-	MYO1C,MYO1C,LOC100306951,MYO1C	4203,-2705,28364,3174
chr7:130081612-130082695	chr7	+	130081786	130082726	True	NM_177524,NM_018718	chr7,chr7	+,-	MEST,TSGA14	43319,-932
chr3:64006775-64007204	chr3	+	64006774	64007087	True	NM_014814,NM_001128149	chr3,chr3	-,+	PSMD6,ATXN7	2092,-53413
chr17:26971618-26971983	chr17	+	26971641	26972031	True	NM_014680,NM_003170	chr17,chr17	-,+	KIAA0100,SUPT6H	192,17270
chr17:76373253-76374070	chr17	+	76373382	76373744	True	NM_003955,NM_024419	chr17,chr17	-,+	SOCS3,PGS1	-17224,990
chr2:131279729-131280056	chr2	+	131279736	131280028	True	NR_027314,NM_032545,NM_001079530	chr2,chr2,chr2	-,+,+	LOC150527,CFC1,CFC1B	27490,-951,-1120
chr2:131279729-131280056	chr2	-	131355889	131356181	False	NR_027314,NM_032545,NM_001079530	chr2,chr2,chr2	+,-,-	LOC150527,CFC1,CFC1B	-27518,951,1120
chr5:169065327-169067081	chr5	+	169065586	169066816	True	NM_003062,NM_004946	chr5,chr5	-,+	SLIT3,DOCK2	-337453,-1386
chr20:42355654-42355966	chr20	+	42355661	42355796	True	NM_001008901,NM_176791,NM_002466	chr20,chr20,chr20	-,-,+	GTSF1L,GTSF1L,MYBL2	-19,-19,-60003
chr17:40019607-40020887	chr17	+	40020019	40020819	True	NM_018143,NM_152467	chr17,chr17	-,+	KLHL11,KLHL10	868,-26027
chr12:11511461-11513102	chr12	+	11512162	11512576	True	NM_005039,NM_199353,NR_033890,NM_199354,NR_036583	chr12,chr12,chr12,chr12,chr12	-,-,+,-,+	PRB1,PRB1,LOC338817,PRB1,LOC100129361	-3638,-3638,188387,-3638,-188445
chr18:32956666-32956881	chr18	+	32956688	32956760	True	NM_145756,NR_024566	chr18,chr18	-,+	ZNF396,ZNF271	591,-86503
chr10:106026417-106026638	chr10	+	106026525	106026688	True	NM_001191013,NM_183239,NM_001191015,NM_001191014,NM_025145	chr10,chr10,chr10,chr10,chr10	+,+,+,+,-	GSTO2,GSTO2,GSTO2,GSTO2,WDR96	1942,1942,8198,8198,-34405
chr9:86320451-86322067	chr9	+	86320580	86321992	True	NM_053067,NM_013438,NM_001190727	chr9,chr9,chr9	-,-,+	UBQLN1,UBQLN1,C9orf103	1226,1226,-82609
chr17:80653359-80653836	chr17	+	80653359	80653713	True	NM_006822,NM_024619	chr17,chr17	-,+	RAB40B,FN3KRP	2937,20868
chr1:40634208-40635008	chr1	+	40634234	40635015	True	NM_001142604,NM_012421	chr1,chr1	-,+	PPT1,RLF	-71092,-7244
chr1:17631116-17631909	chr1	+	17631176	17631958	True	NM_001136204,NM_012387	chr1,chr1	-,+	RCC2,PADI4	133149,2731
chr17:57968789-57969622	chr17	+	57968834	57969552	True	NM_001193611,NM_001193610,NM_001193613,NM_001193612,NM_001193609,NM_016261,NM_003161	chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,-,+	TUBD1,TUBD1,TUBD1,TUBD1,TUBD1,TUBD1,RPS6KB1	808,808,808,808,808,808,890
chr6:134367803-134368998	chr6	+	134368197	134368881	True	NM_004865,NM_145176	chr6,chr6	+,-	TBPL1,SLC2A12	-93954,4958
chr10:51832065-51832337	chr10	+	51832069	51832202	True	NM_018232,NM_001005751,NM_001143974	chr10,chr10,chr10	+,+,-	FAM21B,FAM21A,ASAH2	5683,-4437,176229
chr19:10443493-10443842	chr19	+	10443542	10443858	True	NM_002162,NM_133452,NM_003259	chr19,chr19,chr19	-,-,+	ICAM3,RAVER1,ICAM5	6537,506,-42938
chr5:122110697-122111044	chr5	+	122110747	122110963	True	NM_000943,NM_003100	chr5,chr5	-,+	PPIC,SNX2	261512,-48
chr17:43504720-43505273	chr17_ctg5_hap1	+	119921	120181	False	NM_001113738,NM_174919,NM_199282	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	+,-,-	ARL17A,ARHGAP27,ARHGAP27	75539,5276,-1785
chr17:43504720-43505273	chr17	+	43504796	43505056	True	NR_024435,NM_174919,NM_199282	chr17,chr17,chr17	+,-,-	LOC100133991,ARHGAP27,ARHGAP27	-165289,5276,-1784
chr9:38394599-38395765	chr9	+	38394700	38395659	True	NM_001007563,NM_000692	chr9,chr9	-,+	IGFBPL1,ALDH1B1	28844,-2049
chr15:90647429-90648265	chr15	+	90647628	90648168	True	NM_002168,NM_020210	chr15,chr15	-,+	IDH2,SEMA4B	-1920,79983
chr1:108734407-108735466	chr1	+	108734488	108735262	True	NM_213651,NM_013386,NM_001143987	chr1,chr1,chr1	-,-,+	SLC25A24,SLC25A24,NBPF6	151,7762,257641
chr4:159595548-159596775	chr4	+	159595918	159596756	True	NM_001008393,NM_004453	chr4,chr4	-,+	C4orf46,ETFDH	-2716,-2702
chr3:53528833-53529275	chr3	+	53528954	53529319	True	NM_001128840,NM_001128839,NM_000720,NM_018403	chr3,chr3,chr3,chr3	+,+,+,-	CACNA1D,CACNA1D,CACNA1D,DCP1A	23,23,23,-147300
chr9:38423122-38423457	chr9	+	38423161	38423423	True	NM_001007563,NM_000692	chr9,chr9	-,+	IGFBPL1,ALDH1B1	1071,-30515
chr17:11502528-11504096	chr17	+	11502556	11503715	True	NM_144680,NM_001372	chr17,chr17	-,+	ZNF18,DNAH9	397037,-861
chr1:120340693-120342270	chr1	+	120340922	120342151	True	NM_001159352,NM_006623	chr1,chr1	-,+	REG4,PHGDH	12103,-86561
chr19:1492885-1493242	chr19	+	1492931	1493199	True	NM_138393,NM_017573	chr19,chr19	+,-	REEP6,PCSK4	-1817,-2524
chr6:42899266-42899620	chr6	+	42899386	42899446	True	NM_006586,NM_001008739	chr6,chr6	+,-	CNPY3,C6orf226	-2577,-40832
chr14:96672858-96673476	chr14	+	96672889	96673445	True	NM_000623,NM_018036	chr14,chr14	+,-	BDKRB2,ATG2B	-1805,156291
chr9:125590195-125590532	chr9	+	125590194	125590396	True	NM_080859,NM_005388	chr9,chr9	+,-	OR1K1,PDCL	-27843,589
chr5:10655985-10656404	chr5	+	10656067	10656430	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-91683,105008
chr8:103668519-103668771	chr8	+	103668520	103668768	True	NM_024410,NM_005655,NM_001032282	chr8,chr8,chr8	+,-,-	ODF1,KLF10,KLF10	-104723,-537,-2352
chr5:135234346-135234667	chr5	+	135234489	135234715	True	NM_000590,NM_012159	chr5,chr5	-,+	IL9,FBXL21	-2973,31290
chr22:29194583-29196108	chr22	+	29195050	29195980	True	NM_005080,NM_173510,NM_001079539	chr22,chr22,chr22	-,+,-	XBP1,CCDC117,XBP1	630,-26439,630
chr5:131700740-131701485	chr5	+	131700986	131701349	True	NM_003060,NR_037500,NR_037898	chr5,chr5,chr5	+,-,-	SLC22A5,MIR3936,LOC553103	4051,-1,4316
chr2:242040888-242041187	chr2	+	242041078	242041191	True	NR_028049,NM_182501,NM_002712,NR_028051,NR_028050	chr2,chr2,chr2,chr2,chr2	-,-,+,-,-	MTERFD2,MTERFD2,PPP1R7,MTERFD2,MTERFD2	607,607,48710,607,607
chr11:33892176-33893529	chr11	+	33892259	33893349	True	NM_001142316,NM_203364,NM_001142315	chr11,chr11,chr11	-,+,-	LMO2,CAPRIN1,LMO2	-888,179880,-750
chr4:15656633-15657030	chr4	+	15656678	15656924	True	NM_001193534,NM_001193535,NM_012161,NM_001145191,NR_036464	chr4,chr4,chr4,chr4,chr4	-,-,-,+,-	FBXL5,FBXL5,FBXL5,FAM200B,FBXL5	161,161,161,26427,161
chr2:169661214-169662323	chr2	+	169661220	169662319	True	NM_020675,NM_001171632,NM_001039724,NM_052946	chr2,chr2,chr2,chr2	-,+,+,+	SPC25,NOSTRIN,NOSTRIN,NOSTRIN	84676,-2171,-2171,-2164
chr10:89569696-89570981	chr10	+	89569965	89570731	True	NM_032810,NR_028492	chr10,chr10	-,+	ATAD1,CFLP1	7236,7338
chr5:140871656-140871949	chr5	+	140871862	140871958	True	NM_032406,NM_032407,NM_018929,NM_018928,NM_001079812	chr5,chr5,chr5,chr5,chr5	+,+,+,+,-	PCDHGC4,PCDHGC5,PCDHGC5,PCDHGC4,DIAPH1	-7172,-3105,-3105,-7172,126714
chr16:50775828-50776064	chr16	+	50775841	50775921	True	NM_001042355,NM_001042412,NM_015247,NM_182854	chr16,chr16,chr16,chr16	+,+,+,-	CYLD,CYLD,CYLD,SNX20	39,107,39,-60577
chr7:84687101-84687648	chr7	+	84687262	84687322	True	NM_000840,NM_152754	chr7,chr7	+,-	GRM3,SEMA3D	1585907,63975
chr4:49292444-49293037	chr4	+	49292579	49292643	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-304367,-383764
chrX:140967023-140967370	chrX	+	140967029	140967278	True	NM_145665,NM_177456	chrX,chrX	-,+	SPANXE,MAGEC3	-180374,15173
chr3:196668055-196668654	chr3	+	196668249	196668608	True	NM_007362,NR_024388,NM_001042540	chr3,chr3,chr3	-,+,-	NCBP2,LOC152217,NCBP2	906,885,906
chr4:75480910-75481317	chr4	+	75481064	75481358	True	NM_001657,NM_001729	chr4,chr4	+,-	AREG,BTC	-486,238574
chr4:75480910-75481317	chr4	+	75311288	75311582	False	NM_001657,NM_002089	chr4,chr4	+,-	AREG,CXCL2	-486,-346291
chr10:88852912-88853787	chr10	+	88852930	88853831	True	NM_005271,NM_019054	chr10,chr10	-,+	GLUD1,FAM35A	995,1121
chr3:150481958-150483844	chr3	+	150481986	150483873	True	NM_005067,NM_016275	chr3,chr3	-,+	SIAH2,SELT	-723,-160977
chr10:12113490-12114065	chr10	+	12113835	12114118	True	NM_018706,NM_080599	chr10,chr10	+,-	DHTKD1,UPF2	-2959,-28812
chr1:153436915-153437707	chr1	+	153437093	153437615	True	NM_002963,NM_176823	chr1,chr1	-,+	S100A7,S100A7A	-3956,-48144
chr1:153436915-153437707	chr1	-	153378354	153378404	False	NM_176823,NM_002964	chr1,chr1	+,-	S100A7A,S100A8	10595,-14690
chr2:170334388-170335721	chr2	+	170334751	170335767	True	NM_152384,NM_024622	chr2,chr2	+,-	BBS5,FASTKD1	238,94707
chr11:125773074-125773731	chr11	+	125773172	125773784	True	NM_013264,NM_031307	chr11,chr11	+,-	DDX25,PUS3	487,-56
chr1:24285574-24285797	chr1	+	24285614	24285744	True	NM_001191006,NM_017761	chr1,chr1	-,+	SRSF10,PNRC2	21259,556
chr17:61917343-61919065	chr17	+	61917862	61918846	True	NM_001199163,NM_001098426	chr17,chr17	+,-	PSMC5,SMARCD2	-12869,1555
chr20:43939169-43940321	chr20	+	43939267	43940236	True	NM_003833,NM_030592,NM_030590,NM_014276	chr20,chr20,chr20,chr20	-,-,-,+	MATN4,MATN4,MATN4,RBPJL	-2300,-2300,-2300,-3827
chr4:95260953-95261580	chr4	+	95261020	95261138	True	NM_001011515,NM_014485	chr4,chr4	+,-	PDLIM5,HPGDS	111899,2939
chr6:85474593-85475377	chr6	+	85474636	85475167	True	NM_001204813,NM_001080508	chr6,chr6	+,-	NT5E,TBX18	684134,-737
chr21:37438872-37439617	chr21	+	37439009	37439665	True	NM_017438,NM_001007259,NM_001757	chr21,chr21,chr21	-,-,+	SETD4,SETD4,CBR1	-6193,-6398,2619
chr7:44142626-44143242	chr7	+	44142828	44143242	True	NM_001129,NM_001127218	chr7,chr7	+,-	AEBP1,POLD2	717,19955
chr13:98606378-98607197	chr13	+	98606416	98607210	True	NM_178861,NM_002271	chr13,chr13	-,+	RNF113B,IPO5	222361,-540
chr1:2564009-2564276	chr1	+	2564141	2564323	True	NM_033467,NM_152371	chr1,chr1	-,+	MMEL1,C1orf93	208,-46003
chr12:31873328-31874198	chr12	+	31873514	31874172	True	NR_004854,NM_001135863,NM_001113402	chr12,chr12,chr12	-,+,-	AMN1,METTL20,AMN1	7986,-60964,7986
chr8:11560836-11561232	chr8	+	11560976	11561234	True	NM_002052,NM_001908	chr8,chr8	+,-	GATA4,CTSB	482,164462
chr19:36017828-36018206	chr19	+	36017844	36018120	True	NM_001166035,NM_001166034,NM_014364,NM_198538	chr19,chr19,chr19,chr19	-,-,+,-	SBSN,SBSN,GAPDHS,SBSN	1183,1183,6193,1183
chr9:130369710-130370611	chr9	+	130369805	130370419	True	NM_003165,NM_001032221,NM_001035534	chr9,chr9,chr9	+,+,-	STXBP1,STXBP1,FAM129B	4066,4066,-28537
chr1:186799292-186799594	chr1	+	186799312	186799392	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-149753,-1342
chr5:56591581-56592720	chr5	+	56591908	56592748	True	NM_001127236,NM_001017992	chr5,chr5	+,-	GPBP1,ACTBL2	-82058,185938
chr6:167623760-167624006	chr6	+	167623777	167624019	True	NM_005299,NM_001145121	chr6,chr6	-,+	GPR31,TCP10L2	-52458,-39747
chr20:57581759-57581988	chr20	+	57581849	57581963	True	NM_001336,NM_030773	chr20,chr20	-,+	CTSZ,TUBB1	396,12345
chr11:2162928-2164081	chr11	+	2162943	2163996	True	NM_001127598,NR_028043,NM_000612,NM_001007139,NR_030158,NR_028044	chr11,chr11,chr11,chr11,chr11,chr11	-,+,-,-,-,+	IGF2,IGF2AS,IGF2,IGF2,MIR483,IGF2AS	-602,-1238,-2739,6888,-7504,-1238
chr8:41656548-41657151	chr8	+	41656623	41657148	True	NM_000037,NM_178819,NM_020475,NM_020476,NM_020477	chr8,chr8,chr8,chr8,chr8	-,+,-,-,-	ANK1,AGPAT6,ANK1,ANK1,ANK1	-1483,-220967,-1483,-1483,-1483
chr1:44872921-44873172	chr1	+	44873101	44873219	True	NM_018150,NM_024066	chr1,chr1	+,-	RNF220,ERI3	-2192,-52162
chr3:142833385-142834855	chr3	+	142833524	142834721	True	NM_004267,NR_034032	chr3,chr3	+,-	CHST2,LOC100289361	3946,-113215
chr5:180287902-180288146	chr5	+	180287917	180287989	True	NR_027183,NM_152283,NM_001172638	chr5,chr5,chr5	+,-,-	LOC729678,ZFP62,ZFP62	-31009,347,347
chr16:850740-851007	chr16	+	850808	850972	True	NM_001013638,NM_016541	chr16,chr16	+,-	PRR25,GNG13	4470,-75
chr4:95678840-95679122	chr4	+	95678906	95678974	True	NM_001203,NM_014485	chr4,chr4	+,-	BMPR1B,HPGDS	153,-414879
chr12:57079682-57080317	chr12	+	57079847	57080124	True	NM_003725,NM_006601	chr12,chr12	+,-	HSD17B6,PTGES3	76983,2012
chrX:119581487-119583392	chrX	+	119581594	119583143	True	NM_001122606,NM_012069	chrX,chrX	-,+	LAMP2,ATP1B4	20113,-85712
chr17:48609815-48610070	chr17	+	48610017	48610107	True	NM_017957,NM_001267	chr17,chr17	+,-	EPN3,CHAD	-20,-63790
chr21:44742432-44743144	chr21	+	44742455	44743183	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	126720,103869
chrX:30251244-30251587	chrX	+	30251407	30251636	True	NM_000475,NM_002365,NM_002367	chrX,chrX,chrX	-,+,+	NR0B1,MAGEB3,MAGEB4	75909,-2905,8420
chrX:30251244-30251587	chrX	+	30249662	30249899	False	NM_000475,NM_002365	chrX,chrX	-,+	NR0B1,MAGEB3	77646,-1160
chr21:40751498-40752114	chr21	+	40751635	40752154	True	NM_004627,NM_004965,NM_001146218	chr21,chr21,chr21	+,-,+	WRB,HMGN1,WRB	58,-30588,7537
chr22:19940620-19940975	chr22	+	19940703	19940777	True	NM_001135162,NM_001135161,NM_007310,NM_006440	chr22,chr22,chr22,chr22	+,+,+,-	COMT,COMT,COMT,TXNRD2	-1709,-2294,9292,-11344
chr1:234614991-234615368	chr1	+	234615070	234615373	True	NM_001012985,NM_005646	chr1,chr1	+,-	C1orf31,TARBP1	-105699,-221
chr7:12409726-12410360	chr7	+	12409890	12410402	True	NM_018374,NM_001135924	chr7,chr7	+,-	TMEM106B,VWDE	-159107,33504
chr12:94072702-94074070	chr12	+	94072848	94073892	True	NM_003348,NM_003805	chr12,chr12	-,+	UBE2N,CRADD	-236822,-1755
chr7:35296423-35296874	chr7	+	35296468	35296889	True	NM_001166220,NM_001077653,NM_001011553	chr7,chr7,chr7	-,-,+	TBX20,TBX20,SEPT7	-2757,-2757,543737
chr1:50533655-50535281	chr1	+	50533911	50535326	True	NM_032785,NM_001144777	chr1,chr1	-,+	AGBL4,ELAVL4	-44285,-20283
chr8:88799791-88800545	chr8	+	88799819	88800561	True	NM_152418,NM_173538	chr8,chr8	-,+	DCAF4L2,CNBD1	85787,-921207
chr9:33245073-33246360	chr9	+	33245128	33246276	True	NM_014471,NM_001172415	chr9,chr9	+,-	SPINK4,BAG1	-4983,18533
chr1:170633090-170633395	chr1	+	170633103	170633410	True	NM_022716,NM_006902,NR_026957	chr1,chr1,chr1	+,+,-	PRRX1,PRRX1,LOC284688	-98,-98,-379754
chr19:40462517-40463783	chr19	+	40462861	40463712	True	NM_003890,NM_006503	chr19,chr19	-,+	FCGBP,PSMC4	-22328,13360
chr7:56134404-56135817	chr7	+	56134645	56135691	True	NM_001130069,NM_004577,NM_001042469,NM_001146333,NM_015411,NR_002957,NM_001042470	chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,-,+,+,+,+,+	SUMF2,PSPH,SUMF2,SUMF2,SUMF2,SNORA15,SUMF2	-2792,-15377,-2792,-2792,-2792,-6546,-2792
chr7:153747130-153748060	chr7	+	153747147	153747968	True	NM_130797,NM_007349	chr7,chr7	+,-	DPP6,PAXIP1	1808,1046768
chr7:153747130-153748060	chr7	-	149746870	149747735	False	NM_145230,NR_027040	chr7,chr7	+,-	ATP6V0E2,LOC401431	-176868,-175919
chr11:129765542-129765936	chr11	+	129765697	129765925	True	NM_138788,NM_001143835,NM_006165	chr11,chr11,chr11	+,-,-	TMEM45B,NFRKB,NFRKB	-80007,-207,-2793
chr9:26885366-26887064	chr9	+	26885611	26886821	True	NM_024828,NM_001099223,NM_001167575	chr9,chr9,chr9	-,+,-	C9orf82,IFT74,C9orf82	6064,60215,6064
chr3:125486722-125486944	chr3	+	125486801	125486959	True	NR_024250,NR_031687	chr3,chr3	+,-	LOC100125556,MIR548I1	148484,22486
chr3:125486722-125486944	chr3	-	129720328	129720378	False	NM_001128224,NM_007117	chr3,chr3	-,+	TMCC1,TRH	-107909,-27265
chr3:122915471-122916486	chr3	+	122915633	122916361	True	NM_012430,NM_001031702	chr3,chr3	+,-	SEC22A,SEMA5B	4412,-169057
chr12:130387453-130387719	chr12	+	130387517	130387669	True	NM_133448,NM_007197	chr12,chr12	-,+	TMEM132D,FZD10	593,259334
chr3:180629042-180630074	chr3	+	180629444	180629802	True	NM_005087,NM_001190233,NM_001013438,NM_001013439	chr3,chr3,chr3,chr3	+,-,+,+	FXR1,DNAJC19,FXR1,FXR1	431,77560,431,431
chr1:107683498-107683744	chr1	+	107683509	107683694	True	NM_001113226,NM_001113228,NM_001079874,NM_014917	chr1,chr1,chr1,chr1	+,+,-,+	NTNG1,NTNG1,VAV3,NTNG1	-931,-931,547483,-815
chr12:110011700-110012657	chr12	+	110011793	110012514	True	NM_001114185,NM_000431,NM_052845	chr12,chr12,chr12	+,+,-	MVK,MVK,MMAB	-344,-344,-435
chr1:1053449-1053697	chr1	+	1053450	1053686	True	NM_017891,NR_029639	chr1,chr1	-,+	C1orf159,MIR200B	-1714,48797
chr5:133970873-133971251	chr5	+	133970880	133971161	True	NM_021982,NM_016103,NM_001033503	chr5,chr5,chr5	+,-,-	SEC24A,SAR1B,SAR1B	13317,-2347,-2347
chr15:96877710-96878155	chr15	+	96877709	96877995	True	NR_031715,NM_001145156,NM_001145155,NM_001145157,NR_034095,NM_021005	chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,-,+	MIR1469,NR2F2,NR2F2,NR2F2,LOC400456,NR2F2	-1270,-1966,-8603,-1191,-1007380,-3649
chr13:108867994-108869447	chr13	+	108868102	108869382	True	NM_032859,NM_001098268,NM_206937,NM_002312	chr13,chr13,chr13,chr13	+,-,-,-	ABHD13,LIG4,LIG4,LIG4	1380,1386,-220,-972
chr12:31901325-31901766	chr12	+	31901380	31901818	True	NR_004854,NM_001135863	chr12,chr12	-,+	AMN1,METTL20	-19272,-88827
chr3:133384030-133384508	chr3	+	133384356	133384519	True	NM_001063,NM_007027	chr3,chr3	+,-	TF,TOPBP1	80457,-3619
chr17:72984870-72985297	chr17	+	72984874	72985312	True	NM_014603,NM_030630	chr17,chr17	+,-	CDR2L,C17orf28	-1198,-15974
chr4:188866976-188867296	chr4	+	188867043	188867265	True	NM_173553,NM_174900	chr4,chr4	-,+	TRIML2,ZFP42	159193,49659
chr11:7530821-7531104	chr11	+	7530826	7531138	True	NM_003621,NM_016229	chr11,chr11	+,-	PPFIBP2,CYB5R2	3862,163733
chr19:53195764-53196933	chr19	+	53195875	53196901	True	NR_003936,NR_023311	chr19,chr19	-,+	ZNF83,ZNF137P	-1989,-95989
chr15:68579522-68580326	chr15	+	68579605	68580173	True	NM_017882,NM_015322	chr15,chr15	-,+	CLN6,FEM1B	-57525,-9528
chr1:202938195-202939616	chr1	+	202938327	202939429	True	NM_016243,NM_138391	chr1,chr1	-,+	CYB5R1,TMEM183A	-1923,37104
chr6:110735712-110736863	chr6	+	110735827	110736811	True	NM_004032,NM_003649,NM_015891	chr6,chr6,chr6	-,-,+	DDO,DDO,CDC40	-8,-8,-234254
chrX:107019521-107019888	chrX	+	107019535	107019794	True	NM_198057,NM_012216	chrX,chrX	-,+	TSC22D3,MID2	-518,49289
chr5:140723448-140723682	chr5	+	140723480	140723710	True	NM_032095,NM_018922,NM_005642,NM_032009,NM_032011,NM_018915,NM_018916	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,-,+,+,+,+	PCDHGB1,PCDHGB1,TAF7,PCDHGA2,PCDHGA3,PCDHGA2,PCDHGA3	6117,6117,-23129,-5181,4,-5181,4
chrX:109247007-109247479	chrX	+	109247315	109247479	True	NM_032227,NM_017698,NR_004379	chrX,chrX,chrX	+,+,-	TMEM164,TMEM164,SNORD96B	-1024,-1503,220859
chr14:94641919-94642393	chr14	+	94641961	94642430	True	NM_032036,NM_058237,NM_020958	chr14,chr14,chr14	-,+,+	IFI27L2,PPP4R4,PPP4R4	-46004,-1363,-1363
chr9:34612281-34612542	chr9	+	34612416	34612516	True	NM_000155,NM_024348,NM_148178,NM_148179,NM_007234	chr9,chr9,chr9,chr9,chr9	+,-,-,-,-	GALT,DCTN3,C9orf23,C9orf23,DCTN3	34118,8030,-315,-315,8030
chr13:22028319-22030264	chr13	+	22028843	22030141	True	NM_153251,NM_002010	chr13,chr13	-,+	ZDHHC20,FGF9	3423,215073
chr20:23030694-23031090	chr20	+	23030825	23031123	True	NM_001052,NM_000361	chr20,chr20	+,-	SSTR4,THBD	-14819,-524
chr2:203130819-203131112	chr2	+	203130831	203131026	True	NM_003352,NM_015934	chr2,chr2	-,+	SUMO1,NOP58	-27509,-367
chr5:74805016-74805435	chr5	+	74805051	74805386	True	NM_005713,NM_031361,NM_016218,NM_001130105	chr5,chr5,chr5,chr5	-,-,+,-	COL4A3BP,COL4A3BP,POLK,COL4A3BP	2131,2131,2270,2483
chr3:166687426-166688407	chr3	+	166687445	166688357	True	NM_001122752,NM_001199202	chr3,chr3	+,-	SERPINI1,ZBBX	765074,409774
chr22:31031965-31032452	chr22	+	31032088	31032500	True	NM_001001479,NR_036550	chr22,chr22	+,-	SLC35E4,PES1	-346,-29088
chrX:100445310-100446349	chrX	+	100445517	100446255	True	NM_001171184,NM_001168474	chrX,chrX	+,-	DRP2,TAF7L	28677,100120
chr3:150696530-150696774	chr3	+	150696529	150696803	True	NR_024066,NM_174878,NM_001195794	chr3,chr3,chr3	+,-,-	CLRN1OS,CLRN1,CLRN1	-6120,-5743,-5743
chr4:153595675-153596633	chr4	+	153595724	153596395	True	NM_152680,NM_001025593	chr4,chr4	-,+	TMEM154,ARFIP1	4983,104716
chr7:73704730-73705215	chr7	+	73704754	73705162	True	NM_181471,NM_003388,NM_032421	chr7,chr7,chr7	-,+,+	RFC2,CLIP2,CLIP2	-36016,-1000,-1000
chrX:112056346-112057118	chrX	+	112056386	112057153	True	NM_001004308,NM_001113490	chrX,chrX	+,-	ZCCHC16,AMOT	-730185,9251
chr4:186296532-186297217	chr4	+	186296732	186297160	True	NM_181726,NM_018409	chr4,chr4	+,-	ANKRD37,LRP2BP	20679,3042
chr3:150999120-150999793	chr3	+	150999240	150999755	True	NM_053002,NM_014879	chr3,chr3	+,-	MED12L,P2RY14	-194626,-3010
chr11:68819086-68819366	chr11	+	68819264	68819404	True	NM_139075,NM_145015	chr11,chr11	+,-	TPCN2,MRGPRF	-2965,-38414
chrY:20137268-20138545	chrY	+	20137378	20138387	True	NM_004825,NM_001001722	chrY,chrY	+,+	CDY2A,CDY2B	-191,-190
chrY:20137268-20138545	chrY	-	19991379	19992388	False	NM_004825,NM_001001722	chrY,chrY	-,-	CDY2A,CDY2B	191,190
chrY:20137268-20138545	chrY	-	26193850	26194022	False	NM_004680,NM_001003895,NM_001003894,NR_001526,NM_170723	chrY,chrY,chrY,chrY,chrY	-,-,-,+,-	CDY1,CDY1B,CDY1B,TTTY17A,CDY1	189,189,189,437456,189
chrY:20137268-20138545	chrY	+	27768402	27768574	False	NM_004680,NR_002179,NM_001003895,NM_001003894,NM_170723	chrY,chrY,chrY,chrY,chrY	+,-,+,+,+	CDY1,TTTY17C,CDY1B,CDY1B,CDY1	-189,-437482,-189,-189,-189
chrX:37027908-37028196	chrX	+	37027916	37028222	True	NM_006520,NM_001013736	chrX,chrX	-,+	DYNLT3,FAM47C	678717,-1535
chr20:48791067-48791509	chr20	+	48791344	48791411	True	NR_027889,NM_005194	chr20,chr20	-,+	TMEM189,CEBPB	-21009,15964
chr10:91294779-91295078	chr10	+	91294778	91295016	True	NM_213606,NM_012420	chr10,chr10	-,+	SLC16A12,IFIT5	347,-120510
chr19:54692520-54692754	chr19	+	54692571	54692801	True	NM_001146056,NM_001146082,NM_001146083,NM_024075,NM_024298,NM_001077446	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,+,-,+	MBOAT7,MBOAT7,MBOAT7,TSEN34,MBOAT7,TSEN34	982,982,982,1317,982,2302
chr6:33713095-33714039	chr6	+	33713384	33713884	True	NM_001142883,NM_054111,NM_002224	chr6,chr6,chr6	-,-,+	IP6K3,IP6K3,ITPR3	928,928,-124286
chr19:42299085-42299332	chr19	+	42299188	42299379	True	NM_173506,NM_001815	chr19,chr19	-,+	LYPD4,CEACAM3	49180,1154
chr7:98798513-98799489	chr7	+	98798709	98798966	True	NM_001145715,NR_002147	chr7,chr7	-,+	KPNA7,MYH16	6184,71957
chrX:153639285-153639795	chrX	+	153639288	153639756	True	NM_001009932,NM_001009933,NM_001009934,NM_000116,NM_006730,NM_181313,NM_181312,NM_181311,NR_024048	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,+,-,+,+,+,+	DNASE1L1,DNASE1L1,DNASE1L1,TAZ,DNASE1L1,TAZ,TAZ,TAZ,TAZ	721,721,721,120,-1713,120,120,120,120
chr19:40811912-40812400	chr19	+	40812096	40812313	True	NM_001031696,NM_001626	chr19,chr19	+,-	PLD3,AKT2	42018,-20831
chr7:26683217-26684941	chr7	+	26683465	26684843	True	NR_022006,NM_001145531	chr7,chr7	-,+	KIAA0087,C7orf71	-105021,-6028
chr7:22401282-22402185	chr7	+	22401459	22402236	True	NM_012294,NM_000600	chr7,chr7	-,+	RAPGEF5,IL6	-4926,364529
chr1:41127658-41128291	chr1	+	41127709	41128237	True	NM_001142587,NM_014747	chr1,chr1	+,-	NFYC,RIMS3	29004,3137
chr20:26092886-26093383	chr20	+	26092924	26093059	True	NR_003678,NR_026713	chr20,chr20	-,+	C20orf191,FAM182A	1681,-57733
chr2:197502076-197503217	chr2	+	197502269	197503256	True	NM_020760,NM_001080539	chr2,chr2	-,+	HECW2,CCDC150	-44934,1099
chr13:50156424-50156823	chr13	+	50156703	50156879	True	NM_138450,NM_018191	chr13,chr13	+,-	ARL11,RCBTB1	45555,2898
chr2:242753043-242753351	chr2	+	242753044	242753154	True	NM_001167599,NM_005018,NM_080741,NM_001167601,NM_001167600,NM_001167602	chr2,chr2,chr2,chr2,chr2,chr2	+,-,+,+,+,+	NEU4,PDCD1,NEU4,NEU4,NEU4,NEU4	-1065,47954,-1065,-2935,-2935,-1065
chr22:30443765-30444585	chr22	+	30443836	30444585	True	NM_152510,NM_002309	chr22,chr22	+,-	HORMAD2,LIF	31867,198268
chr18:57365025-57365785	chr18	+	57365111	57365800	True	NM_133459,NM_021127	chr18,chr18	-,+	CCBE1,PMAIP1	-467,201391
chr6:27833276-27833933	chr6	+	27833475	27833795	True	NM_003546,NM_003511,NM_003533,NM_005322	chr6,chr6,chr6,chr6	-,+,-,-	HIST1H4L,HIST1H2AL,HIST1H3I,HIST1H1B	7554,-419,6364,1624
chr2:197793653-197794291	chr2	+	197793790	197794230	True	NM_001080539,NM_024989	chr2,chr2	+,-	CCDC150,PGAP1	-289496,-2336
chr2:190306541-190307003	chr2	+	190306599	190307048	True	NM_032168,NM_014585	chr2,chr2	+,-	WDR75,SLC40A1	-498,138552
chr20:29524477-29524823	chr20	+	29524587	29524800	True	NM_001037731,NR_003579	chr20,chr20	-,+	DEFB116,FRG1B	371638,87078
chr15:74174964-74175181	chr15	+	74174968	74175180	True	NM_004809,NM_153356	chr15,chr15	-,+	STOML1,TBC1D21	109505,-9054
chr3:48722076-48722914	chr3	+	48722210	48722875	True	NM_016453,NM_033629,NM_184231	chr3,chr3,chr3	-,+,-	NCKIPSD,TREX1,NCKIPSD	509,-215032,509
chr2:23673052-23673280	chr2	+	23673051	23673305	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	476679,-64804
chr1:171114907-171115505	chr1	+	171115036	171115540	True	NR_002601,NR_031627	chr1,chr1	+,-	FMO6P,MIR1295	-8216,-44089
chr12:19292185-19293882	chr12	+	19292257	19293719	True	NM_019012,NM_033123,NM_001143821,NM_001190860	chr12,chr12,chr12,chr12	+,-,+,+	PLEKHA5,PLCZ1,PLEKHA5,PLEKHA5	-9682,-401339,-9682,-9682
chr13:101326190-101326397	chr13	+	101326194	101326327	True	NM_032813,NM_001178004,NM_001079669	chr13,chr13,chr13	-,+,-	TMTC4,PCCA,TMTC4	826,-584976,826
chr1:184380853-184381153	chr1	+	184380852	184381190	True	NM_025191,NM_030806	chr1,chr1	-,+	EDEM3,C1orf21	342901,-24763
chr17:46045974-46046642	chr17	+	46046310	46046610	True	NM_024320,NM_176096	chr17,chr17	-,+	PRR15L,CDK5RAP3	-11200,1818
chr16:68480915-68481315	chr16	+	68480936	68481090	True	NM_133458,NM_018667	chr16,chr16	+,-	ZFP90,SMPD3	92570,1369
chr1:145714425-145715161	chr1	+	145714464	145715148	True	NM_001201325,NM_007053	chr1,chr1	+,-	PDZK1,CD160	12517,467
chr6:14737354-14737943	chr6	+	14737374	14737932	True	NM_001031713,NM_004973	chr6,chr6	-,+	CCDC90A,JARID2	-922585,508594
chrX:52681649-52682614	chrX	+	52681655	52682519	True	NR_027250,NM_173358	chrX,chrX	+,-	SSX8,SSX7	-29721,1481
chrX:52681649-52682614	chrX	+	48163397	48163447	False	NM_021014,NM_005635	chrX,chrX	-,+	SSX3,SSX1	52745,-48651
chr22:37639989-37640193	chr22	+	37640161	37640227	True	NM_013385,NM_002872	chr22,chr22	+,-	CYTH4,RAC2	38267,128
chr1:51435417-51435715	chr1	+	51435538	51435744	True	NM_001262,NM_007051,NM_078626	chr1,chr1,chr1	+,-,+	CDKN2C,FAF1,CDKN2C	-1222,-9602,53
chr5:159826757-159826973	chr5	+	159826824	159826972	True	NM_022090,NM_004219	chr5,chr5	-,+	C5orf54,PTTG1	138,21892
chr4:89374272-89374843	chr4	+	89374320	89374891	True	NM_016323,NM_001042616	chr4,chr4	+,-	HERC5,PIGY	3376,70114
chr4:159593698-159594378	chr4	+	159593739	159594175	True	NM_001008393,NM_004453	chr4,chr4	-,+	C4orf46,ETFDH	-537,-513
chr1:249133102-249133551	chr1	+	249133252	249133444	True	NM_024836,NM_030645	chr1,chr1	+,-	ZNF672,SH3BP5L	-773,-13098
chr10:118300465-118302446	chr10	+	118300696	118302249	True	NM_000936,NM_144661	chr10,chr10	+,-	PNLIP,C10orf82	3178,127283
chr16:88933267-88934092	chr16	+	88933346	88934110	True	NM_001080487,NM_000512,NM_016209	chr16,chr16,chr16	-,-,+	PABPN1L,GALNS,TRAPPC2L	-278,-9972,-9891
chr22:24094700-24095197	chr22	+	24094887	24095237	True	NM_013378,NM_021916,NM_182520	chr22,chr22,chr22	-,-,+	VPREB3,ZNF70,C22orf15	1443,-1608,9970
chr5:140105520-140106604	chr5	+	140105632	140106306	True	NR_026705,NR_026704,NM_002109	chr5,chr5,chr5	+,+,-	VTRNA1-3,VTRNA1-2,HARS	0,-7172,-34661
chr7:94537342-94537745	chr7	+	94537554	94537732	True	NM_003919,NM_001166161,NM_001166163,NM_001166162,NM_017650,NM_001166160	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,+,+	SGCE,PPP1R9A,PPP1R9A,PPP1R9A,PPP1R9A,PPP1R9A	-252033,1477,1477,1477,-656,-656
chr16:1537211-1537550	chr16	+	1537269	1537535	True	NM_001013658,NM_016111	chr16,chr16	-,+	PTX4,TELO2	983,5816
chr1:180604869-180606109	chr1	+	180605216	180605899	True	NM_001135669,NM_032360,NM_004736	chr1,chr1,chr1	+,-,+	XPR1,ACBD6,XPR1	-4131,-133194,-4131
chr12:102011000-102011366	chr12	+	102011073	102011329	True	NM_206821,NM_001177948	chr12,chr12	+,-	MYBPC1,SYCP3	-22390,121979
chr7:992512-993054	chr7	+	992629	993003	True	NM_006869,NM_017781	chr7,chr7	-,+	ADAP1,CYP2W1	1336,29831
chr14:105302856-105303104	chr14	+	105302917	105303087	True	NR_024396,NM_001014432	chr14,chr14	+,-	MGC23270,AKT1	-15432,-40837
chr2:86117353-86119170	chr2	+	86117416	86118266	True	NM_003896,NM_032827	chr2,chr2	-,+	ST3GAL5,ATOH8	-1259,-136570
chr2:43452250-43452462	chr2	+	43452327	43452499	True	NR_027251,NM_006887	chr2,chr2	+,-	LOC100129726,ZFP36L2	1850,1296
chr19:17983280-17983488	chr19	+	17983326	17983488	True	NR_000012,NM_000215,NM_000453	chr19,chr19,chr19	+,-,+	SNORA68,JAK3,SLC5A5	-9980,-24485,-595
chr11:65343927-65344491	chr11	+	65344000	65344410	True	NM_001099409,NM_006396,NM_152832,NM_021070,NM_001098785,NM_001098784	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,-,+,+	EHBP1L1,SSSCA1,FAM89B,LTBP3,FAM89B,FAM89B	-542,-6108,-4231,-18301,-4231,-4231
chr9:79075384-79076228	chr9	+	79075427	79076104	True	NM_018339,NM_001490,NM_001097633	chr9,chr9,chr9	-,+,+	RFK,GCNT1,GCNT1	-65983,-1410,-1410
chr19:45578714-45578956	chr19	+	45578789	45578859	True	NM_145288,NM_001007269,NM_001007270,NM_024707	chr19,chr19,chr19,chr19	-,+,+,+	ZNF296,GEMIN7,GEMIN7,GEMIN7	879,3670,3658,3670
chr14:24672889-24674663	chr14	+	24673543	24674462	True	NM_006405,NM_001014842,NM_014169,NM_174944,NM_001184739	chr14,chr14,chr14,chr14,chr14	-,-,-,+,+	TM9SF1,TM9SF1,CHMP4A,TSSK4,TSSK4	-8661,-8661,8625,463,463
chr1:2344684-2345489	chr1	+	2344683	2345525	True	NM_002617,NM_007033,NM_153818	chr1,chr1,chr1	-,+,-	PEX10,RER1,PEX10	-673,-21520,-673
chr19:2945219-2945490	chr19	+	2945223	2945439	True	NM_021217,NM_001143986	chr19,chr19	-,+	ZNF77,TLE6	-254,32096
chr8:50821337-50822357	chr8	+	50821537	50822296	True	NM_003068,NM_018967	chr8,chr8	-,+	SNAI2,SNTG1	-987538,2300
chr19:49829281-49829995	chr19	+	49829545	49829957	True	NM_001040031,NM_014037,NM_001774	chr19,chr19,chr19	+,-,+	CD37,SLC6A16,CD37	8719,-1071,8719
chr2:111335541-111336812	chr2	+	111335891	111336843	True	NM_001142807,NM_005054,NM_001123363,NM_032260,NM_001037866	chr2,chr2,chr2,chr2,chr2	+,-,-,-,-	ACOXL,RGPD5,RGPD6,RGPD5,RGPD6	153306,-1213,70,70,70
chr2:111335541-111336812	chr2	-	109306104	109306764	False	NM_022336,NM_006267	chr2,chr2	-,+	EDAR,RANBP2	299114,29172
chr2:111335541-111336812	chr2	-	110549800	110550752	False	NM_178584,NM_005054,NM_001037866,NM_032260,NM_001123363	chr2,chr2,chr2,chr2,chr2	-,+,+,+,+	SEPT10,RGPD5,RGPD6,RGPD5,RGPD6	-178017,1213,-70,-70,-70
chr9:34692942-34694623	chr9	+	34693248	34694159	True	NM_004512,NM_006274	chr9,chr9	+,-	IL11RA,CCL19	-39367,-1974
chr17:56159036-56159562	chr17	+	56159043	56159611	True	NR_034041,NM_080677	chr17,chr17	-,+	SRSF1,DYNLL2	-74336,1168
chr17:4675416-4675628	chr17	+	4675460	4675520	True	NM_001144939,NM_003963	chr17,chr17	-,+	VMO1,TM4SF5	14259,-324
chr22:37545557-37545838	chr22	+	37545768	37545834	True	NM_000878,NM_024681	chr22,chr22	-,+	IL2RB,KCTD17	178,-98040
chr15:40600619-40601554	chr15	+	40601230	40601554	True	NM_004573,NM_001145643	chr15,chr15	-,+	PLCB2,PHGR1	-1056,41679
chr15:41048194-41048834	chr15	+	41048287	41048714	True	NM_018145,NM_005258	chr15,chr15	-,+	FAM82A2,GCHFR	-829,7570
chr15:43217956-43218655	chr15	+	43218185	43218536	True	NM_024956,NM_173500	chr15,chr15	+,-	TMEM62,TTBK2	207185,-5178
chr9:140774742-140774964	chr9	+	140774751	140774927	True	NM_032937,NM_000718	chr9,chr9	-,+	C9orf37,CACNA1B	-261443,-2561
chr17:42579220-42580283	chr17	+	42579401	42580186	True	NM_001466,NM_001002909,NR_036474	chr17,chr17,chr17	+,-,-	FZD2,GPATCH8,GPATCH8	54625,822,822
chr1:155879141-155879567	chr1	+	155879185	155879442	True	NM_006912,NM_181885	chr1,chr1	-,+	RIT1,RXFP4	1785,32037
chrY:20488471-20489260	chrY	+	20488484	20488848	True	NR_028083,NR_002161,NR_002160	chrY,chrY,chrY	-,+,+	FAM41AY1,NCRNA00230A,NCRNA00230B	78134,-116,-95
chrY:20488471-20489260	chrY	-	19690923	19691287	False	NR_028084,NR_002161,NR_002160	chrY,chrY,chrY	+,-,-	FAM41AY2,NCRNA00230A,NCRNA00230B	-78136,116,95
chr12:54785365-54786123	chr12	+	54785482	54785830	True	NM_001130968,NM_015481,NR_029894,NM_001130967	chr12,chr12,chr12,chr12	-,-,+,-	ZNF385A,ZNF385A,MIR148B,ZNF385A	-399,-7001,-54533,-399
chr1:172384113-172385997	chr1	+	172384259	172385979	True	NM_002642,NM_139240	chr1,chr1	-,+	PIGC,C1orf105	27301,3848
chr1:2486802-2487260	chr1	+	2486811	2487309	True	NR_037844,NR_026927,NM_003820	chr1,chr1,chr1	-,-,+	LOC100133445,LOC115110,TNFRSF14	1191,-2527,495
chr13:98113222-98114139	chr13	+	98113227	98113697	True	NM_080818,NM_021033	chr13,chr13	-,+	OXGR1,RAP2A	-466623,-26803
chr1:165667656-165668409	chr1	+	165667674	165668198	True	NM_000696,NR_036683	chr1,chr1	-,+	ALDH9A1,LOC440700	-108,-72
chr5:180357560-180359437	chr5	+	180359173	180359235	True	NM_001159710,NM_152283	chr5,chr5	+,-	BTNL8,ZFP62	-22660,-70887
chr15:42785688-42786872	chr15	+	42785708	42786668	True	NM_003825,NM_022473,NM_130798	chr15,chr15,chr15	+,-,+	SNAP23,ZFP106,SNAP23	1166,-35978,1166
chr11:74804562-74804958	chr11	+	74804561	74804726	True	NM_001005285,NM_001145212	chr11,chr11	-,+	OR2AT4,SLCO2B1	-3803,57305
chr5:132365691-132366605	chr5	+	132366002	132366400	True	NM_017665,NM_002154	chr5,chr5	-,+	ZCCHC10,HSPA4	-3762,21261
chr3:53534313-53534986	chr3	+	53534529	53535021	True	NM_001128840,NM_001128839,NM_000720,NM_018403	chr3,chr3,chr3,chr3	+,+,+,-	CACNA1D,CACNA1D,CACNA1D,DCP1A	-5556,-5556,-5556,-152875
chr20:3992779-3993507	chr20	+	3993148	3993541	True	NM_001134337,NR_029519,NM_001134338,NM_007219	chr20,chr20,chr20,chr20	-,+,-,-	RNF24,MIR103-2,RNF24,RNF24	2734,-95069,2734,2572
chr20:20031665-20032280	chr20	+	20031665	20032298	True	NM_001167816,NM_015585,NM_016652	chr20,chr20,chr20	+,+,-	C20orf26,C20orf26,CRNKL1	4991,859,4443
chr12:132314018-132314536	chr12	+	132314067	132314289	True	NM_175066,NM_016155	chr12,chr12	-,+	DDX51,MMP17	314641,-1177
chr4:41363137-41363338	chr4	+	41363216	41363322	True	NM_001112717,NM_173075,NM_014988,NM_001112718	chr4,chr4,chr4,chr4	+,-,+,+	LIMCH1,APBB2,LIMCH1,LIMCH1	-463,-146581,-463,-463
chr2:56410112-56410831	chr2	+	56410133	56410812	True	NM_001080433,NR_030623	chr2,chr2	+,-	CCDC85A,MIR216B	445,-182203
chr2:203777822-203778039	chr2	+	203777863	203778063	True	NM_024744,NM_018256,NM_001104586	chr2,chr2,chr2	+,-,+	ALS2CR8,WDR12,ALS2CR8	-801,-914,-940
chr11:9405810-9406132	chr11	+	9405865	9406059	True	NM_006391,NM_001165030	chr11,chr11	+,-	IPO7,TMEM41B	109,-69569
chr7:144105573-144106956	chr7	+	144105678	144106531	True	NM_005435,NM_001080413	chr7,chr7	+,-	ARHGEF5,NOBOX	-53240,-4892
chr1:24155318-24157002	chr1	+	24156676	24157014	True	NM_000191,NM_001166059,NM_007260	chr1,chr1,chr1	-,-,+	HMGCL,HMGCL,LYPLA2	-4727,-4727,-39095
chr15:29210947-29211184	chr15	+	29210971	29211031	True	NM_001130414,NM_138704,NM_005503	chr15,chr15,chr15	+,-,+	APBA2,NDNL2,APBA2	2808,351036,2808
chr9:139893777-139894429	chr9	+	139893788	139894044	True	NM_004669,NM_183241	chr9,chr9	-,+	CLIC3,C9orf142	-2764,-6977
chr19:39323288-39323525	chr19	+	39323462	39323528	True	NM_001398,NM_001042507	chr19,chr19	-,+	ECH1,LGALS7B	-965,-43664
chr14:97396404-97398393	chr14	+	97396451	97398352	True	NM_003384,NM_018036	chr14,chr14	+,-	VRK1,ATG2B	-132818,-566773
chr11:4405233-4406402	chr11	+	4405276	4406325	True	NM_003141,NM_001005172	chr11,chr11	-,+	TRIM21,OR52K2	8651,64199
chr17:76122974-76123591	chr17	+	76123118	76123556	True	NM_152468,NM_001127198,NM_007267	chr17,chr17,chr17	+,-,-	TMC8,TMC6,TMC6	3302,1355,4982
chr3:187461128-187461480	chr3	+	187461263	187461459	True	NM_001134738,NM_001130845,NM_001706,NR_034062	chr3,chr3,chr3,chr3	-,-,-,+	BCL6,BCL6,BCL6,LOC100131635	-8568,-6978,2104,-41160
chr15:76007668-76007871	chr15	+	76007707	76007889	True	NM_175881,NM_001897	chr15,chr15	+,-	ODF3L1,CSPG4	8429,-2518
chr15:76007668-76007871	chr15	-	78169943	78169993	False	NM_001101404,NR_027024	chr15,chr15	+,-	SH2D7,LOC645752	214933,49245
chr7:100036674-100037754	chr7	+	100037203	100037597	True	NM_019606,NM_145030	chr7,chr7	+,-	MEPCE,C7orf47	-10006,-3109
chr5:93077334-93078623	chr5	+	93077480	93078661	True	NM_005654,NM_153216	chr5,chr5	+,-	NR2F1,POU5F2	-158488,-171
chr17:36282888-36283778	chr17	+	36282918	36283184	True	NM_032258,NR_024178,NM_001123391	chr17,chr17,chr17	+,-,+	TBC1D3F,LOC284100,TBC1D3	775,-38555,775
chr17:36282888-36283778	chr17	-	34808878	34809144	False	NM_001001418,NM_004773,NM_001040282	chr17,chr17,chr17	-,+,-	TBC1D3C,ZNHIT3,TBC1D3G	-787,33328,-775
chr17:36282888-36283778	chr17	-	34592997	34593080	False	NM_001001435,NM_001001418	chr17,chr17	+,-	CCL4L1,TBC1D3C	46953,-970
chr17:36282888-36283778	chr17	-	34504770	34505036	False	NM_001001417,NM_001001435	chr17,chr17	-,+	TBC1D3B,CCL4L1	-782,33431
chr7:38238455-38238875	chr7	+	38238483	38238855	True	NM_001003799,NM_032016	chr7,chr7	-,+	TARP,STARD3NL	74443,-20601
chr7:102985314-102986314	chr7	+	102985319	102985735	True	NM_001204453,NM_001129887,NM_002803,NM_014377	chr7,chr7,chr7,chr7	+,-,+,-	PSMC2,DNAJC2,PSMC2,DNAJC2	2235,1,2235,1
chr18:3590438-3590707	chr18	+	3590474	3590580	True	NR_024101,NM_001003809	chr18,chr18	+,-	FLJ35776,DLGAP1	3531,254766
chr17:45475700-45476380	chr17	+	45476242	45476324	True	NR_027416,NR_033934	chr17,chr17	+,-	LOC100272146,MRPL45P2	24518,93716
chrX:129039709-129040197	chrX	+	129039762	129040156	True	NM_001166221,NM_006649,NM_016032	chrX,chrX,chrX	+,+,-	UTP14A,UTP14A,ZDHHC9	2,2,-61852
chr7:44118524-44119973	chr7	+	44118670	44120002	True	NM_013284,NM_001129	chr7,chr7	-,+	POLM,AEBP1	2177,23957
chr11:8829436-8830790	chr11	+	8829485	8830694	True	NM_139157,NM_213618,NM_020642	chr11,chr11,chr11	-,-,+	ST5,ST5,C11orf17	2245,1587,102006
chr1:156208567-156210096	chr1	+	156208934	156210090	True	NM_024897,NM_199173,NM_198406	chr1,chr1,chr1	-,+,-	PAQR6,BGLAP,PAQR6	7803,1860,7752
chr14:21464161-21464858	chr14	+	21464162	21464826	True	NM_014579,NM_201538,NM_001029991,NR_033419,NM_022734	chr14,chr14,chr14,chr14,chr14	+,-,+,+,+	SLC39A2,NDRG2,METTL17,SLC39A2,METTL17	2587,28488,-6248,2587,-6248
chr10:115615551-115615902	chr10	+	115615604	115615938	True	NM_198514,NM_014881	chr10,chr10	+,-	NHLRC2,DCLRE1A	-1271,-1745
chrX:52827574-52827977	chrX	+	52827624	52827704	True	NM_130775,NM_001009616	chrX,chrX	+,-	XAGE5,SPANXN5	13523,-1236
chr17:61680365-61680988	chr17	+	61680633	61680772	True	NM_016360,NM_030576	chr17,chr17	+,-	TACO1,LIMD2	-2465,96806
chr9:67923597-67925245	chr2	-	95524758	95524838	False	NR_003366,NM_144705	chr2,chr2	-,+	ANKRD20A8P,TEKT4	-1938,12393
chr9:67923597-67925245	chr9	+	67924119	67925091	True	NR_027422,NM_001012419,NM_032250	chr9,chr9,chr9	-,+,+	FAM27B,ANKRD20A3,ANKRD20A1	-129930,1669,1669
chr9:67923597-67925245	chr9	+	69379339	69380189	False	NM_001085457,NM_001098805	chr9,chr9	-,+	CBWD6,ANKRD20A4	-116746,1791
chr9:67923597-67925245	chr9	-	44120948	44121209	False	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	-490218,-436115
chr9:67923597-67925245	chr9	-	43135534	43136185	False	NM_001012419,NR_026558,NR_027472,NM_001012421	chr9,chr9,chr9,chr9	-,+,-,-	ANKRD20A3,AQP7P3,LOC642929,ANKRD20A2	-1990,-277442,9349,-1990
chr9:67923597-67925245	chr9	+	42365724	42366574	False	NR_003670,NM_001012419,NM_001012421	chr9,chr9,chr9	-,+,+	KGFLP2,ANKRD20A3,ANKRD20A2	-346140,1728,1728
chr17:72888939-72889168	chr17	+	72888988	72889048	True	NM_178128,NM_178160	chr17,chr17	-,+	FADS6,OTOP2	707,31321
chr3:50381347-50382043	chr3	+	50381392	50381704	True	NM_015896,NM_007022,NM_006545,NM_170712,NM_170713,NM_007182,NM_170714	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-,-	ZMYND10,CYB561D2,NPRL2,RASSF1,RASSF1,RASSF1,RASSF1	1502,6592,6832,-5728,-6497,-3025,-3025
chr15:67459474-67460451	chr15	+	67459520	67460230	True	NM_001145104,NM_024666	chr15,chr15	+,-	SMAD3,AAGAB	-1078,86894
chrX:46939123-46940584	chrX	+	46939204	46940533	True	NM_004683,NM_152869,NM_001135998	chrX,chrX,chrX	+,+,-	RGN,RGN,NDUFB11	-1481,-1481,63613
chr17:48787253-48788970	chr17	+	48787322	48788625	True	NM_052855,NM_016424,NM_006107	chr17,chr17,chr17	-,+,+	ANKRD40,LUC7L3,LUC7L3	-2052,8300,8300
chr3:154147108-154147466	chr3	+	154147133	154147506	True	NM_001038705,NM_015595	chr3,chr3	-,+	GPR149,ARHGEF26	49,-308035
chr2:7001780-7003682	chr2	+	7001844	7003628	True	NM_207315,NM_080657	chr2,chr2	-,+	CMPK2,RSAD2	2358,14167
chr13:95121286-95122054	chr13	+	95121451	95121999	True	NM_180989,NM_001129889,NM_001922	chr13,chr13,chr13	+,-,-	GPR180,DCT,DCT	132104,9989,9989
chr16:4586008-4586798	chr16	+	4586097	4586645	True	NM_001199055,NM_001199054,NM_013399,NM_001199056,NM_001145011	chr16,chr16,chr16,chr16,chr16	-,-,-,-,+	C16orf5,C16orf5,C16orf5,C16orf5,LOC342346	2221,1876,2221,2221,19845
chr15:77711563-77711842	chr15	+	77711683	77711891	True	NM_018200,NM_024776	chr15,chr15	+,-	HMG20A,PEAK1	1351,-134350
chr17:80694266-80694477	chr17	+	80694422	80694494	True	NM_022158,NM_006822	chr17,chr17	+,-	FN3K,RAB40B	-1023,-37824
chrX:54194323-54194534	chrX	+	54194434	54194564	True	NM_058163,NM_017848	chrX,chrX	+,-	TSR2,FAM120C	272288,15202
chr1:183547658-183548205	chr1	+	183547840	183548234	True	NM_000433,NM_015149	chr1,chr1	-,+	NCF2,RGL1	11555,56973
chr19:56739729-56741613	chr19	+	56739756	56741068	True	NM_024303,NM_033106	chr19,chr19	-,+	ZSCAN5A,GALP	-97,-52418
chr19:2454979-2455721	chr19	+	2455034	2455242	True	NM_032737,NM_015675	chr19,chr19	-,+	LMNB2,GADD45B	1766,20880
chr10:73634030-73634295	chr10	+	73634056	73634168	True	NM_001171936,NM_002778	chr10,chr10	+,-	CDH23,PSAP	-62467,-22974
chr15:23891292-23891562	chr15	+	23891343	23891455	True	NM_005664,NM_019066	chr15,chr15	+,-	MKRN3,MAGEL2	-80940,1588
chr10:106113595-106114032	chr10	+	106113708	106113996	True	NM_001008723,NM_033397	chr10,chr10	+,-	CCDC147,ITPRIP	-238,-20045
chr2:211093714-211094442	chr2	+	211093798	211094348	True	NM_001608,NM_199229	chr2,chr2	-,+	ACADL,RPE	-3583,-226468
chr15:44118929-44119175	chr15	+	44119064	44119224	True	NM_005926,NM_001167941,NM_024908	chr15,chr15,chr15	-,+,+	MFAP1,WDR76,WDR76	-2113,-3,-3
chr9:135040022-135040591	chr9	+	135040021	135040613	True	NM_032536,NM_004269	chr9,chr9	+,-	NTNG2,MED27	-2738,-84768
chr3:158299823-158300867	chr3	+	158299986	158300904	True	NM_022443,NM_020169	chr3,chr3	+,-	MLF1,LXN	-11091,89628
chr17:3213050-3213481	chr17	+	3213057	3213528	True	NM_002550,NR_024128	chr17,chr17	-,+	OR3A1,OR3A4	-17181,10
chr1:33839015-33839399	chr1	+	33839064	33839386	True	NM_145238,NM_198040	chr1,chr1	+,-	ZSCAN20,PHC2	98845,1858
chr14:97261368-97262869	chr14	+	97261380	97262821	True	NM_003384,NM_018036	chr14,chr14	+,-	VRK1,ATG2B	862,-431702
chr12:109833814-109835341	chr12	+	109834023	109835205	True	NM_001101421,NM_031954	chr12,chr12	+,-	MYO1H,KCTD10	-7550,80000
chr20:56283895-56284096	chr20	+	56283923	56284101	True	NM_020182,NM_199169,NM_002591,NM_199170,NM_199171	chr20,chr20,chr20,chr20,chr20	-,-,+,-,-	PMEPA1,PMEPA1,PCK1,PMEPA1,PMEPA1	980,1574,-147837,1574,2490
chr17:7016171-7017567	chr17	+	7016223	7017559	True	NM_080913,NM_080912,NM_001181,NM_080914,NM_001201352,NM_201566	chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,+	ASGR2,ASGR2,ASGR2,ASGR2,ASGR2,SLC16A13	621,621,621,120,621,-76880
chr19:927751-927985	chr19	+	927761	927883	True	NM_138774,NM_005224	chr19,chr19	-,+	C19orf22,ARID3A	-14536,-1775
chr4:188864231-188864786	chr4	+	188864282	188864453	True	NM_173553,NM_174900	chr4,chr4	-,+	TRIML2,ZFP42	162006,52471
chr17:27507554-27508025	chr17	+	27507690	27508044	True	NM_203318,NM_005208,NM_078471	chr17,chr17,chr17	-,+,-	MYO18A,CRYBA1,MYO18A	-283,65830,-283
chr16:30961039-30961356	chr16	+	30961106	30961368	True	NM_014712,NM_152288,NR_024348	chr16,chr16,chr16	+,+,-	SETD1A,ORAI3,FBXL19-AS1	7246,-752,-26516
chr20:5099485-5099821	chr20	+	5099531	5099799	True	NM_001009923,NM_182649,NM_001009925,NM_001009924,NR_028370,NM_002592,NM_014145,NM_003818	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	-,-,-,-,+,-,-,+	C20orf30,PCNA,C20orf30,C20orf30,PCNA-AS1,PCNA,C20orf30,CDS2	-5798,898,-5798,-5798,432,7519,-5798,7682
chr11:61657187-61658148	chr11	+	61657339	61657895	True	NM_001139443,NM_021727	chr11,chr11	+,-	BEST1,FADS3	59460,1161
chr13:20767439-20767708	chr13	+	20767467	20767596	True	NM_004004,NM_001190965	chr13,chr13	-,+	GJB2,ZMYM2	-353,-234544
chr5:142005168-142006141	chr5	+	142005194	142006190	True	NM_001144892,NM_001135608	chr5,chr5	-,+	FGF1,ARHGAP26	-4287,144101
chr3:49048205-49048906	chr3	+	49048455	49048953	True	NM_001009996,NM_199074,NM_199073,NR_029948,NR_029690,NM_018114,NM_018031	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,+,-,-,-,+	DALRD3,NDUFAF3,NDUFAF3,MIR425,MIR191,DALRD3,WDR6	7114,8954,9664,8764,9239,9564,-3869
chr2:101770009-101770323	chr2	+	101770025	101770319	True	NM_001102426,NM_017546	chr2,chr2	-,+	TBC1D8,C2orf29	-2179,99025
chr4:22512214-22513375	chr4	+	22512222	22513412	True	NM_001128432,NM_145290	chr4,chr4	+,-	GBA3,GPR125	181135,4310
chr9:4277894-4279153	chr9	+	4277902	4278925	True	NM_001042413,NM_004170	chr9,chr9	-,+	GLIS3,SLC1A1	21172,211501
chr6:82796892-82797355	chr6	+	82796897	82797281	True	NM_006670,NM_015525	chr6,chr6	+,-	TPBG,IBTK	275641,160217
chr20:57582564-57583074	chr20	+	57582835	57583101	True	NM_001336,NM_030773	chr20,chr20	-,+	CTSZ,TUBB1	-526,11207
chr20:58505811-58507450	chr20	+	58506614	58507393	True	NM_022106,NM_001190827,NM_006242,NM_001190826,NM_014258	chr20,chr20,chr20,chr20,chr20	+,+,-,+,-	C20orf177,C20orf177,PPP1R3D,C20orf177,SYCP2	8050,8050,8010,1425,33
chr18:12884803-12885182	chr18	+	12884802	12885203	True	NM_001013437,NM_080423,NM_080422,NM_002828	chr18,chr18,chr18,chr18	+,-,-,-	SEH1L,PTPN2,PTPN2,PTPN2	62779,-468,-468,-468
chr10:129686969-129687607	chr10	+	129686987	129687411	True	NM_006504,NM_152311	chr10,chr10	+,-	PTPRE,CLRN3	17913,3850
chr11:86026965-86027272	chr11	+	86027176	86027258	True	NR_024596,NM_007166	chr11,chr11	+,-	C11orf73,PICALM	-12833,-247068
chr7:6680555-6681003	chr7	+	6680646	6681020	True	NM_017560,NM_006956	chr7,chr7	+,-	ZNF853,ZNF12	-25170,65596
chr9:35813688-35814688	chr9	+	35813837	35814555	True	NM_001039592,NM_016446,NM_032593,NM_172312	chr9,chr9,chr9,chr9	-,+,-,-	SPAG8,TMEM8B,HINT2,SPAG8	-1578,14666,537,-1578
chr5:169533190-169533454	chr5	+	169533312	169533484	True	NM_144769,NM_012188,NM_001129891	chr5,chr5,chr5	+,+,-	FOXI1,FOXI1,FAM196B	-446,-446,-125568
chr8:23080374-23081446	chr8	+	23080953	23081488	True	NR_033928,NM_003844	chr8,chr8	+,-	LOC389641,TNFRSF10A	1245,1242
chr7:93516155-93518061	chr7	+	93516242	93517489	True	NM_021955,NM_006528	chr7,chr7	+,-	GNGT1,TFPI2	18330,2634
chr4:186355295-186356053	chr4	+	186355598	186355884	True	NR_028085,NM_001114357,NM_018359	chr4,chr4,chr4	-,+,-	UFSP2,C4orf47,UFSP2	-8459,-5115,-8459
chr11:44994722-44995691	chr11	+	44994749	44995299	True	NM_006034,NR_026681	chr11,chr11	-,+	TP53I11,LOC221122	-22141,153
chr11:119205501-119206050	chr11	+	119205531	119206063	True	NM_015645,NM_032015	chr11,chr11	-,+	C1QTNF5,RNF26	11370,-345
chr3:194353635-194353970	chr3	+	194353637	194353905	True	NM_001011655,NM_001166305,NM_153690,NM_138399,NM_001166306	chr3,chr3,chr3,chr3,chr3	-,-,+,-,-	TMEM44,TMEM44,FAM43A,TMEM44,TMEM44	295,295,52716,295,295
chr17:9941481-9942922	chr17	+	9941699	9942629	True	NM_201432,NM_004246	chr17,chr17	-,+	GAS7,GLP2R	-1635,-212369
chrX:40590190-40591693	chrX	+	40590429	40591477	True	NM_004229,NM_001195522	chrX,chrX	-,+	MED14,LOC347411	3378,-107662
chr14:102771319-102771581	chr14	+	102771404	102771630	True	NM_014226,NM_018335	chr14,chr14	-,+	RAGE,ZNF839	-49,14465
chr17:45039617-45041444	chr17	+	45039915	45041019	True	NM_203400,NM_054022	chr17,chr17	-,+	RPRML,GOSR2	15659,-39480
chr20:57427044-57427339	chr20	+	57427073	57427375	True	NM_001077490,NM_080425,NR_002785	chr20,chr20,chr20	+,+,-	GNAS,GNAS,GNAS-AS1	660,660,-1115
chr22:41214865-41215134	chr22	+	41214871	41215141	True	NM_001204827,NM_006358	chr22,chr22	+,-	XPNPEP3,SLC25A17	37943,301
chr19:33463212-33463711	chr19	+	33463216	33463548	True	NM_152266,NM_032816	chr19,chr19	+,-	C19orf40,CCDC123	-119,-347
chr15:67356822-67357224	chr15	+	67357063	67357227	True	NM_005902,NM_024666	chr15,chr15	+,-	SMAD3,AAGAB	967,189897
chr10:90991951-90993376	chr10	+	90991960	90993314	True	NM_001127605,NM_001547	chr10,chr10	-,+	LIPA,IFIT2	18397,68391
chr17:1011545-1011940	chr17	+	1011549	1011931	True	NM_001092,NM_013337	chr17,chr17	-,+	ABR,TIMM22	443,-111243
chr18:47792897-47793558	chr18	+	47793078	47793265	True	NM_145020,NM_001039535	chr18,chr18	-,+	CCDC11,SKA1	-213,108126
chr12:96253079-96253462	chr12	+	96253166	96253490	True	NM_003095,NM_021229	chr12,chr12	+,-	SNRPF,NTN4	-516,-68630
chr1:29565776-29566897	chr1	+	29565789	29566916	True	NM_016011,NM_133177,NM_133178,NM_001195001,NM_001024732,NM_005704	chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,+,-,+	MECR,PTPRU,PTPRU,PTPRU,MECR,PTPRU	-8335,-2812,-2812,-2812,-8335,-2812
chr1:150265894-150266156	chr1	+	150265945	150266160	True	NM_018997,NM_016022,NM_031901	chr1,chr1,chr1	+,-,+	MRPS21,APH1A,MRPS21	108,-24413,108
chr19:16941466-16941964	chr19	+	16941551	16941867	True	NM_024104,NM_015260	chr19,chr19	-,+	C19orf42,SIN3B	-170583,-1392
chr2:172541701-172541993	chr2	+	172541707	172542026	True	NM_003705,NM_001378	chr2,chr2	-,+	SLC25A12,DYNC1I2	208840,1955
chr1:47336852-47338852	chr1	+	47337529	47338573	True	NM_001099772,NR_002788	chr1,chr1	+,-	CYP4B1,CYP4Z2P	-72910,27636
chr1:47336852-47338852	chr1	-	47561681	47561731	False	NM_005764,NM_178134	chr1,chr1	-,+	PDZK1IP1,CYP4Z1	94090,-28572
chr16:89883042-89883290	chr16	+	89883078	89883244	True	NM_032451,NM_000135,NM_001018112	chr16,chr16,chr16	+,-,-	SPIRE2,FANCA,FANCA	11662,-13,-13
chr1:231762337-231762650	chr1	+	231762344	231762490	True	NM_001164537,NM_018662,NM_001164538,NM_001164539,NM_001012957,NM_001012958,NM_001012959,NR_034037,NM_001164549,NM_001164548,NM_001164542,NM_001164541,NM_001164540,NM_001164547,NM_001164546,NM_001164545,NM_001164544,NM_001164550,NM_001164551,NM_001164552,NM_001164553,NM_001164554,NM_001164555,NM_001164556	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,+,+,-,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+	DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,LOC100287814,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1	70,70,70,70,70,70,70,-14508,70,70,70,70,70,70,70,70,70,70,70,70,70,70,70,70
chr19:20280211-20280790	chr19	+	20280382	20280688	True	NM_033196,NM_052852	chr19,chr19	-,+	ZNF682,ZNF486	-130105,-2354
chr19:4398933-4399171	chr19	+	4398984	4399068	True	NM_001199943,NM_003025,NM_005483,NM_001199944	chr19,chr19,chr19,chr19	-,-,+,-	SH3GL1,SH3GL1,CHAF1A,SH3GL1	1547,1547,3591,1397
chr6:48027297-48027809	chr6	+	48027427	48027836	True	NM_207499,NM_001013732,NR_033806	chr6,chr6,chr6	-,-,+	C6orf138,C6orf138,OPN5	8639,8639,-272675
chr9:78503946-78504976	chr9	+	78504161	78505025	True	NM_006200,NR_031679,NM_001190482	chr9,chr9,chr9	+,-,+	PCSK5,MIR548H3,PCSK5	534,-165417,534
chr16:18470994-18471456	chr16	+	18471080	18471416	True	NR_036142,NR_003569	chr16,chr16	-,+	MIR3180-2,ABCC6P1	24758,111153
chr16:18470994-18471456	chr16	+	18431082	18431138	False	NR_036142,NR_003569	chr16,chr16	-,+	MIR3180-2,ABCC6P1	65036,151431
chr16:18470994-18471456	chr16	-	15026702	15026862	False	NR_023387,NM_006985	chr16,chr16	-,+	ABCC6P2,NPIP	-108143,4437
chr16:18470994-18471456	chr16	-	16468482	16468538	False	NR_036447,NM_001079528	chr16,chr16	+,-	PKD1P1,ABCC6	-57067,-151154
chr16:18470994-18471456	chr16	-	16425013	16425349	False	NR_036447,NM_001079528	chr16,chr16	+,-	PKD1P1,ABCC6	-13598,-107685
chr20:34895625-34895970	chr20	+	34895759	34895827	True	NR_027451,NM_015511	chr20,chr20	-,+	LOC647979,C20orf4	-256877,-71363
chr1:161130591-161130824	chr1	+	161130590	161130780	True	NM_016406,NM_001122764,NM_012475,NM_000309,NM_001199873,NM_001014443	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,-,+	UFC1,PPOX,USP21,PPOX,B4GALT3,USP21	-7107,5400,-1387,5400,17028,-1387
chr15:22893297-22893642	chr15	+	22893329	22893559	True	NM_014608,NM_001008860	chr15,chr15	+,-	CYFIP1,NIPA2	-696,140918
chr22:25372123-25372574	chr22	+	25372138	25372602	True	NM_001145206,NM_001001663	chr22,chr22	+,-	KIAA1671,TMEM211	51338,-36824
chr13:79941464-79942201	chr13	+	79941566	79942140	True	NM_001161407,NM_022118	chr13,chr13	+,-	NDFIP2,RBM26	113118,37836
chr3:112203544-112204015	chr3	+	112203575	112203874	True	NM_017945,NM_001085357	chr3,chr3	+,-	SLC35A5,BTLA	77020,14597
chr7:99145620-99147028	chr7	+	99145654	99146937	True	NM_001009958,NM_145111,NM_001009960,NM_138494,NM_001085368,NM_001085367,NM_024061,NM_001083956,NM_001085366	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,-,+,+,+,+,+,+,+	ZNF655,FAM200A,ZNF655,ZNF655,ZNF655,ZNF655,ZNF655,ZNF655,ZNF655	9510,2872,9510,9107,9510,9510,9107,9107,9107
chr4:2229556-2230356	chr4	+	2229624	2230076	True	NM_181808,NM_178557	chr4,chr4	-,+	POLN,NAT8L	945,-168451
chr8:134200035-134200366	chr8	+	134200060	134200412	True	NR_037944,NM_003882,NM_001045557,NM_001204870,NM_080838,NM_001204869	chr8,chr8,chr8,chr8,chr8,chr8	+,+,-,+,+,+	WISP1,WISP1,SLA,WISP1,WISP1,WISP1	2869,2869,-84750,2869,2869,2869
chr22:43538843-43539149	chr22	+	43538935	43539131	True	NM_173467,NM_014507,NM_007311,NM_000714	chr22,chr22,chr22,chr22	-,-,+,+	MCAT,MCAT,TSPO,TSPO	322,322,8403,8403
chr7:992046-992266	chr7	+	992063	992175	True	NM_006869,NM_017781	chr7,chr7	-,+	ADAP1,CYP2W1	2164,30659
chr17:73127911-73128121	chr17	+	73127922	73128002	True	NM_014595,NM_024585	chr17,chr17	-,+	NT5C,ARMC7	-45,-21891
chr3:169685003-169685261	chr3	+	169685077	169685266	True	NM_003262,NR_027622,NR_024409	chr3,chr3,chr3	+,-,-	SEC62,LOC100128164,LOC100128164	-548,-555,-555
chr14:33407629-33407857	chr14	+	33407742	33407826	True	NM_001164749,NM_001165893,NR_027263,NM_173159,NM_022123	chr14,chr14,chr14,chr14,chr14	+,+,-,+,+	NPAS3,NPAS3,C14orf128,NPAS3,NPAS3	632,632,-861837,632,632
chr15:76014971-76015428	chr15	+	76014979	76015411	True	NM_175881,NM_001897	chr15,chr15	+,-	ODF3L1,CSPG4	907,-9790
chr2:241939819-241941449	chr2	+	241939933	241940967	True	NR_033841,NM_001080437	chr2,chr2	-,+	LOC200772,SNED1	-33065,-1729
chr6:125284075-125284478	chr6	+	125284129	125284511	True	NR_026876,NM_152553	chr6,chr6	-,+	STL,RNF217	14,20002
chr11:1140477-1141216	chr11	+	1140586	1141245	True	NM_002457,NM_005961	chr11,chr11	+,-	MUC2,MUC6	-65762,-103880
chr1:228003964-228004965	chr1	+	228004235	228004973	True	NM_183062,NM_023007	chr1,chr1	+,-	PRSS38,JMJD4	-868,-81123
chr2:26371183-26372218	chr2	+	26371367	26372255	True	NM_000182,NM_001168241	chr2,chr2	-,+	HADHA,FAM59B	95389,23704
chr9:99651200-99651772	chr9	+	99651221	99651683	True	NR_028350,NM_001001662	chr9,chr9	+,-	LOC441454,ZNF782	19673,-34832
chr13:28022201-28022894	chr13	+	28022423	28022899	True	NM_002097,NM_152912,NM_001166261,NM_001166262,NM_001166263	chr13,chr13,chr13,chr13,chr13	+,-,-,-,-	GTF3A,MTIF3,MTIF3,MTIF3,MTIF3	-23802,1890,1485,1477,1890
chr13:111773619-111774080	chr13	+	111773626	111774026	True	NM_001113512,NM_145735,NM_001113511,NM_017664	chr13,chr13,chr13,chr13	+,+,+,-	ARHGEF7,ARHGEF7,ARHGEF7,ANKRD10	-6053,-6053,-6053,-206210
chr19:17798828-17799029	chr19	+	17798969	17799037	True	NM_001080421,NM_018174	chr19,chr19	-,+	UNC13A,MAP1S	21,31265
chr11:43701782-43702015	chr11	+	43701916	43702062	True	NR_033868,NM_016142	chr11,chr11	-,+	LOC399881,HSD17B12	-410997,80
chr3:15107503-15107784	chr3	+	15107586	15107693	True	NM_022497,NM_003298	chr3,chr3	-,+	MRPS25,NR2C2	-770,-118411
chr10:95518430-95518974	chr10	+	95518700	95518977	True	NM_005097,NM_145246	chr10,chr10	+,-	LGI1,FRA10AC1	-1186,-56371
chr8:144516141-144516386	chr8	+	144516229	144516423	True	NM_201589,NM_052924	chr8,chr8	-,+	MAFA,RHPN1	-3627,-65264
chr6:42849057-42849589	chr6	+	42849241	42849308	True	NM_001008739,NM_198486	chr6,chr6	-,+	C6orf226,RPL7L1	9303,-1633
chr20:35727011-35727666	chr20	+	35727185	35727282	True	NM_002895,NM_183404,NM_001135771	chr20,chr20,chr20	-,-,+	RBL1,RBL1,RPN2	-2775,-2775,80173
chr16:47505889-47506592	chr16	+	47506068	47506292	True	NM_030790,NM_001031835	chr16,chr16	-,+	ITFG1,PHKB	-11053,-10917
chr12:109270881-109272600	chr12	+	109271209	109272060	True	NM_001917,NM_001161330	chr12,chr12	+,-	DAO,SSH1	1796,-19850
chr11:66137924-66138252	chr11	+	66137947	66138057	True	NM_001532,NM_178864	chr11,chr11	-,+	SLC29A2,NPAS4	1284,50417
chr5:140430823-140431279	chr5	+	140430888	140431316	True	NM_013340,NM_031947	chr5,chr5	+,-	PCDHB1,SLC25A2	-18,252346
chr22:19839769-19841051	chr22	+	19839973	19840969	True	NM_024627,NM_000754,NM_053004	chr22,chr22,chr22	-,+,-	C22orf29,COMT,GNB1L	1452,88293,1543
chr7:92742885-92744374	chr7	+	92743893	92744395	True	NM_024553,NM_001193307,NM_017654	chr7,chr7,chr7	+,-,-	CCDC132,SAMD9,SAMD9	117257,2991,2991
chr19:50642878-50643556	chr19	+	50643296	50643579	True	NM_001145809,NR_024243,NR_024231,NR_024230	chr19,chr19,chr19,chr19	+,-,-,-	MYH14,SNAR-D,SNAR-B1,SNAR-B2	63305,48,-802,-802
chr14:21271470-21273115	chr14	+	21271666	21273132	True	NM_198232,NM_005615,NM_198234,NM_002933,NM_198235	chr14,chr14,chr14,chr14,chr14	-,+,-,-,-	RNASE1,RNASE6,RNASE1,RNASE1,RNASE1	-1108,-22507,-630,-630,-630
chr1:204336655-204337788	chr1	+	204336728	204337762	True	NM_001204171,NR_027022,NM_014935	chr1,chr1,chr1	+,-,-	MDM4,LOC127841,PLEKHA6	147744,1135,-7684
chr20:56727516-56728364	chr20	+	56727861	56728330	True	NM_178456,NR_003505	chr20,chr20	+,-	C20orf85,PPP4R1L	-1942,156216
chr11:94964542-94965536	chr11	+	94964556	94965514	True	NM_144665,NM_015036	chr11,chr11	-,+	SESN3,ENDOD1	-310,-141633
chr17:37887621-37888217	chr17	+	37887632	37887949	True	NM_032339,NM_001030002,NM_005310	chr17,chr17,chr17	-,+,+	C17orf37,GRB7,GRB7	-844,6640,6237
chr20:19262140-19263623	chr20	+	19262366	19263523	True	NR_024564,NM_020689	chr20,chr20	-,+	LOC100130264,SLC24A3	1767,-69127
chr17:65040737-65040999	chr17	+	65040749	65040879	True	NM_014877,NM_000727	chr17,chr17	-,+	HELZ,CACNG1	200490,-148
chr4:57773866-57774146	chr4	+	57774052	57774134	True	NM_032313,NM_001193508,NM_005612	chr4,chr4,chr4	-,+,+	C4orf14,REST,REST	69742,944,-61
chr1:154538542-154539952	chr1	+	154539044	154539756	True	NM_000748,NM_017582	chr1,chr1	+,-	CHRNB2,UBE2Q1	500,-7924
chr15:68499178-68500134	chr15	+	68499213	68500169	True	NM_033429,NM_015322,NM_001031733	chr15,chr15,chr15	-,+,-	CALML4,FEM1B,CALML4	-765,69971,-765
chrX:37546046-37547472	chrX	+	37546051	37547270	True	NM_021083,NM_006520	chrX,chrX	+,-	XK,DYNLT3	-969,159670
chr2:223520624-223520830	chr2	+	223520627	223520873	True	NM_058165,NM_005687	chr2,chr2	+,-	MOGAT1,FARSB	15583,4
chr2:15747365-15747731	chr2	+	15747365	15747710	True	NM_004939,NM_015909	chr2,chr2	+,-	DDX1,NBAS	-15653,-45911
chr10:18687504-18687920	chr10	+	18687692	18687962	True	NM_201570,NM_182543	chr10,chr10	+,-	CACNB2,NSUN6	1550,252638
chr7:6750690-6751250	chr7	+	6750907	6750993	True	NR_002217,NM_006956,NM_016265	chr7,chr7,chr7	+,-,-	PMS2CL,ZNF12,ZNF12	23942,-4341,-4341
chr2:157290075-157290774	chr2	+	157290131	157290485	True	NM_006186,NM_001083112,NM_000408	chr2,chr2,chr2	-,+,+	NR4A2,GPD2,GPD2	-100844,1479,2414
chr9:17143783-17144930	chr9	+	17143787	17144800	True	NM_017637,NM_001114395,NM_017738	chr9,chr9,chr9	-,+,+	BNC2,CNTLN,CNTLN	-273001,-8805,-8805
chr5:79551182-79551447	chr5	+	79551214	79551416	True	NM_001174072,NM_178276,NM_001174071,NM_032567	chr5,chr5,chr5,chr5	-,-,-,+	SERINC5,SERINC5,SERINC5,SPZ1	532,532,532,64373
chr10:99449202-99449764	chr10	+	99449278	99449762	True	NM_021732,NM_031484	chr10,chr10	-,+	AVPI1,MARVELD1	-2263,23702
chr6:155586325-155587153	chr6	+	155586408	155586636	True	NM_001001346,NM_016020	chr6,chr6	+,-	CLDN20,TFB1M	-1312,49039
chr8:102135740-102136469	chr8	+	102135774	102136465	True	NM_001042511,NR_033962	chr8,chr8	-,+	ZNF706,FLJ42969	81459,-71543
chr7:77046749-77047419	chr7	+	77046775	77047464	True	NM_002835,NM_017439	chr7,chr7	+,-	PTPN12,PION	119308,-1058
chr15:34639908-34640180	chr15	+	34640150	34640214	True	NM_018648,NM_175741,NM_001042495	chr15,chr15,chr15	-,+,-	NOP10,C15orf55,SLC12A6	-4788,-2135,-9885
chr5:10610904-10611723	chr5	+	10611220	10611639	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-46837,149799
chr8:8085602-8086079	chr8	+	8085752	8086110	True	NR_024361,NR_031689,NR_024363,NR_024362	chr8,chr8,chr8,chr8	+,-,+,+	FLJ10661,MIR548I3,FLJ10661,FLJ10661	-3,-139141,-3,-3
chr5:76326582-76327553	chr5	+	76326922	76327395	True	NM_018046,NR_003014	chr5,chr5	+,-	AGGF1,SNORA47	-764,49052
chr12:4701289-4702109	chr12	+	4701293	4702044	True	NM_006422,NM_003845	chr12,chr12	-,+	AKAP3,DYRK4	52350,-2100
chr8:42994194-42995053	chr8	+	42994228	42995063	True	NR_027669,NM_152419	chr8,chr8	-,+	RNF170,HGSNAT	-242362,528
chr3:133747502-133748409	chr3	+	133747665	133748317	True	NM_021203,NM_005630	chr3,chr3	+,-	SRPRB,SLCO2A1	-244839,653
chr19:19779299-19779590	chr19	+	19779363	19779599	True	NM_020410,NM_033204	chr19,chr19	-,+	ATP13A1,ZNF101	-4860,63
chr17:62913854-62915062	chr17	+	62915023	62915089	True	NM_199340,NM_001165933	chr17,chr17	-,+	LRRC37A3,RGS9	-120,218366
chr17:36861612-36861841	chr17	+	36861727	36861795	True	NM_001130677,NM_005937	chr17,chr17	-,+	C17orf96,MLLT6	-30540,77
chr12:33590491-33591872	chr12	+	33590630	33591676	True	NM_198992,NM_032834	chr12,chr12	-,+	SYT10,ALG10	1128,583539
chr19:53897468-53898203	chr19	+	53897697	53898140	True	NM_001040185,NM_033341	chr19,chr19	+,-	ZNF765,BIRC8	256,-102822
chr1:36107553-36108164	chr1	+	36107915	36108060	True	NM_178548,NM_002794,NM_001199779	chr1,chr1,chr1	+,-,-	TFAP2E,PSMB2,PSMB2	-69002,-470,-763
chr7:108097203-108097750	chr7	+	108097255	108097772	True	NM_001193584,NM_005010,NM_012328,NM_001193583,NM_001193582	chr7,chr7,chr7,chr7,chr7	-,-,+,-,-	NRCAM,NRCAM,DNAJB9,NRCAM,NRCAM	-414,-414,112416,-414,-414
chr21:44743640-44744675	chr21	+	44743767	44744347	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	125556,102705
chr1:53192341-53192953	chr1	+	53192604	53193000	True	NM_024646,NM_023077	chr1,chr1	+,-	ZYG11B,SELRC1	-524,-28566
chr1:84842886-84843796	chr1	+	84843002	84843634	True	NM_021233,NR_003927	chr1,chr1	+,-	DNASE2B,UOX	20580,19994
chr19:16178606-16179145	chr19	+	16178631	16178873	True	NM_001145160,NM_003290,NM_054113	chr19,chr19,chr19	+,+,-	TPM4,TPM4,CIB3	-365,8261,105463
chr10:45407001-45408404	chr10	+	45407386	45408318	True	NR_033842,NM_001123376	chr10,chr10	-,+	LOC220980,TMEM72	46869,-673
chr19:46367126-46367437	chr19	+	46367133	46367407	True	NM_004819,NM_004497	chr19,chr19	-,+	SYMPK,FOXA3	-585,110
chrX:99851747-99853523	chrX	+	99852032	99853321	True	NM_003270,NM_022144	chrX,chrX	-,+	TSPAN6,TNMD	38536,-12301
chr19:10339382-10341152	chr19	+	10339504	10340920	True	NR_036206,NM_004230	chr19,chr19	+,-	MIR4322,S1PR2	168,1078
chr6:126112314-126112572	chr6	+	126112518	126112620	True	NM_016063,NM_001122842,NM_181782,NM_001199621	chr6,chr6,chr6,chr6	-,+,+,+	HDDC2,NCOA7,NCOA7,NCOA7	-489236,-660,-660,-660
chr6:4893312-4893646	chr6	+	4893321	4893655	True	NM_001143971,NM_006638	chr6,chr6	+,-	CDYL,RPP40	-3146,110666
chr1:24196886-24198342	chr1	+	24197003	24198201	True	NM_000147,NM_007260	chr1,chr1	-,+	FUCA1,LYPLA2	-2144,-79414
chr17:73895300-73895567	chr17	+	73895303	73895607	True	NM_173547,NM_001113324,NM_032478	chr17,chr17,chr17	-,+,-	TRIM65,C17orf106,MRPL38	-2249,79690,5624
chr2:170655635-170655890	chr2	+	170655722	170655934	True	NM_003142,NM_014168	chr2,chr2	+,-	SSB,METTL5	-384,25469
chr1:59044733-59045348	chr1	+	59044832	59045368	True	NM_002353,NR_034014	chr1,chr1	-,+	TACSTD2,LOC100131060	-1666,205454
chr20:42965007-42965751	chr20	+	42965080	42965729	True	NM_178491,NM_001080472	chr20,chr20	+,-	R3HDML,FITM2	-104,-25191
chr8:104582855-104584220	chr8	+	104582978	104584221	True	NM_001100117,NM_030780	chr8,chr8	+,-	RIMS2,SLC25A32	-70063,-155510
chr4:25380094-25380792	chr4	+	25380182	25380709	True	NM_013367,NM_016955	chr4,chr4	+,-	ANAPC4,SEPSECS	-1385,-217978
chr4:1342876-1343437	chr4	+	1342884	1343454	True	NM_001328,NM_020894	chr4,chr4	-,+	CTBP1,KIAA1530	-99976,-1832
chr16:56701129-56701589	chr16	+	56701302	56701618	True	NM_005949,NR_003669,NM_005950,NM_005951	chr16,chr16,chr16,chr16	+,+,-,+	MT1F,MT1IP,MT1G,MT1H	-9498,8030,409,2107
chr10:97815988-97817940	chr10	+	97816300	97817916	True	NM_019084,NR_036113	chr10,chr10	+,-	CCNJ,MIR3157	-13199,6290
chr1:66455342-66457250	chr1	+	66455360	66457273	True	NM_005478,NM_001037340	chr1,chr1	-,+	INSL5,PDE4B	809719,1116
chr3:57110949-57112329	chr3	+	57111244	57112366	True	NM_181727,NM_001128615	chr3,chr3	+,-	SPATA12,ARHGEF3	-16827,1020
chr5:179244730-179245577	chr5	+	179245103	179245561	True	NM_014275,NM_003900	chr5,chr5	-,+	MGAT4B,SQSTM1	-11151,2280
chr11:124498577-124499089	chr11	+	124498588	124498946	True	NM_032811,NR_016021,NM_170601	chr11,chr11,chr11	+,+,-	TBRG1,TBRG1,SIAE	-5898,-5898,44887
chr10:115997789-115999157	chr10	+	115998097	115999020	True	NM_198496,NM_018017	chr10,chr10	+,-	VWA2,C10orf118	-3,-63733
chr19:18118386-18118740	chr19	+	18118414	18118698	True	NM_015683,NM_001025604,NM_005535	chr19,chr19,chr19	+,+,-	ARRDC2,ARRDC2,IL12RB1	278,-6521,79049
chr15:96875814-96876267	chr15	+	96875868	96876283	True	NR_031715,NM_001145156,NM_001145155,NM_001145157,NR_034095,NM_021005	chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,-,+	MIR1469,NR2F2,NR2F2,NR2F2,LOC400456,NR2F2	206,-128,-6765,285,-1005539,-1811
chr9:31918479-31920435	chr9	+	31918889	31920233	True	NM_014314,NM_002197	chr9,chr9	-,+	DDX58,ACO1	606139,464367
chr12:100967373-100967698	chr12	+	100967400	100967730	True	NM_174942,NM_152317	chr12,chr12	+,-	GAS2L3,DEPDC4	32,-306543
chr17:4168853-4170315	chr17	+	4168991	4170175	True	NM_016376,NM_020740,NR_023347	chr17,chr17,chr17	-,-,+	ANKFY1,ANKFY1,CYB5D2	-1717,-1717,-122580
chr9:130856995-130857317	chr9	+	130857023	130857301	True	NM_001006643,NR_033374,NM_052901,NM_001006642	chr9,chr9,chr9,chr9	+,-,+,+	SLC25A25,LOC100289019,SLC25A25,SLC25A25	3534,23762,3515,-2947
chr3:14861356-14861887	chr3	+	14861442	14861718	True	NM_152536,NM_022497	chr3,chr3	+,-	FGD5,MRPS25	-1024,245148
chr16:70331409-70332030	chr16	+	70331409	70331848	True	NM_001014451,NM_001605,NM_007242,NM_001014449	chr16,chr16,chr16,chr16	+,-,+,+	DDX19B,AARS,DDX19B,DDX19B	1223,-7997,1223,1223
chr12:22776915-22777911	chr12	+	22777262	22777885	True	NM_014802,NM_018638,NM_001039481	chr12,chr12,chr12	-,+,+	KIAA0528,ETNK1,ETNK1	-79810,190,190
chr10:71176310-71176603	chr10	+	71176309	71176533	True	NM_001057,NM_012339	chr10,chr10	-,+	TACR2,TSPAN15	191,34692
chrX:84184742-84186552	chrX	+	84184865	84186565	True	NR_024062,NM_001012980	chrX,chrX	+,-	UBE2DNL,SATL1	2591,177465
chr5:118405731-118406363	chr5	+	118405904	118406344	True	NM_173666,NM_005509	chr5,chr5	-,+	DTWD2,DMXL1	-81664,739
chr7:142749841-142750755	chr7	+	142749914	142750800	True	NR_002140,NM_001001667	chr7,chr7	-,+	OR6W1P,OR6V1	10132,-527
chr5:161274486-161275136	chr5	+	161274541	161275175	True	NM_021911,NM_001127643,NM_001127645,NM_001127644,NM_001127647,NM_001127646,NM_001127648,NM_000806	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,+,+,+,+,+,+,+	GABRB2,GABRA1,GABRA1,GABRA1,GABRA1,GABRA1,GABRA1,GABRA1	-299411,93,366,32,2216,722,2527,-395
chr10:93350198-93351173	chr10	+	93350290	93351184	True	NR_024467,NM_182765	chr10,chr10	-,+	LOC100188947,HECTD2	20083,-180245
chr11:47600189-47600504	chr11	+	47600226	47600503	True	NM_018095,NR_024222,NM_004551,NM_001164379,NM_016506	chr11,chr11,chr11,chr11,chr11	-,-,+,+,-	KBTBD4,KBTBD4,NDUFS3,FAM180B,KBTBD4	114,114,58,7726,68
chr9:34524937-34526720	chr9	+	34525115	34526278	True	NR_024369,NM_198573	chr9,chr9	+,-	LOC415056,ENHO	41731,-2078
chr3:71631957-71632179	chr3	+	71631979	71632192	True	NM_018971,NM_001012505,NM_032682	chr3,chr3,chr3	+,-,-	GPR27,FOXP1,FOXP1	171008,998,998
chr22:19006234-19006487	chr22	+	19006236	19006522	True	NR_024157,NR_026651,NR_024159	chr22,chr22,chr22	-,+,+	DGCR11,DGCR10,DGCR9	29416,3614,-940
chr7:50797688-50798676	chr7	+	50797748	50798725	True	NM_001001549,NM_005311,NR_033845	chr7,chr7,chr7	-,-,+	GRB10,GRB10,LOC100129427	1375,1375,-198343
chr12:3982483-3983720	chr12	+	3982693	3983777	True	NM_019854,NM_020367	chr12,chr12	+,-	PRMT8,PARP11	-382319,-85
chr3:150128647-150129611	chr3	+	150128681	150129667	True	NM_014445,NM_014779	chr3,chr3	-,+	SERP1,TSC22D2	134818,-1944
chr1:38229474-38229764	chr1	+	38229474	38229750	True	NM_001031740,NM_001099439,NM_173641	chr1,chr1,chr1	+,-,-	MANEAL,EPHA10,EPHA10	30023,1124,1124
chr2:11502094-11503592	chr2	+	11502541	11503452	True	NM_004850,NM_014668	chr2,chr2	-,+	ROCK2,GREB1	-17830,170789
chr4:48835191-48837109	chr4	+	48835396	48836904	True	NM_001079842,NM_001079841,NM_001079840,NM_015030,NM_001168254,NM_001079839,NM_017830	chr4,chr4,chr4,chr4,chr4,chr4,chr4	+,+,+,-,+,+,+	OCIAD1,OCIAD1,OCIAD1,FRYL,OCIAD1,OCIAD1,OCIAD1	-2209,-2393,-2393,-53080,-2130,-2209,-2393
chr11:125769904-125770625	chr11	+	125769906	125770618	True	NM_013264,NM_031307	chr11,chr11	+,-	DDX25,PUS3	3653,2548
chr17:64876472-64876767	chr17	+	64876568	64876764	True	NM_014877,NM_145811	chr17,chr17	-,+	HELZ,CACNG5	364605,-3228
chr6:47630446-47631106	chr6	+	47630454	47630937	True	NM_153839,NM_014452	chr6,chr6	+,-	GPR111,TNFRSF21	-6179,-352774
chr1:156722145-156723433	chr1	+	156722150	156723195	True	NM_004494,NM_005973,NM_001126051,NM_001126050	chr1,chr1,chr1,chr1	-,+,-,-	HDGF,PRCC,HDGF,HDGF	-607,14078,-126,18
chr5:35622714-35623339	chr5	+	35622782	35623358	True	NM_024867,NM_001042625,NM_144722	chr5,chr5,chr5	+,-,+	SPEF2,CAPSL,SPEF2	-4854,315429,-4854
chr16:70207741-70207964	chr16	+	70207790	70207854	True	NR_033959,NM_173619	chr16,chr16	-,+	LOC729513,CLEC18C	52132,73
chr16:70207741-70207964	chr16	+	69984882	69985048	False	NM_001136214,NR_003610,NM_182619	chr16,chr16,chr16	+,-,+	CLEC18A,PDXDC2P,CLEC18A	-423,114969,-239
chr2:151343484-151343767	chr2	+	151343522	151343620	True	NM_007115,NM_005168	chr2,chr2	+,-	TNFAIP6,RND3	870485,610
chr2:241509642-241510193	chr2	+	241509699	241509909	True	NM_017844,NM_018226	chr2,chr2	-,+	ANKMY1,RNPEPL1	-12294,-1746
chr1:156218089-156218490	chr1	+	156218177	156218392	True	NM_024897,NM_199173,NM_198406	chr1,chr1,chr1	-,+,-	PAQR6,BGLAP,PAQR6	-334,-6277,-385
chr6:164759721-164760688	chr6	+	164759728	164759820	True	NM_206855,NR_037593	chr6,chr6	+,-	QKI,LOC100526820	-924104,-924746
chr8:82644171-82644602	chr8	+	82644259	82644574	True	NR_033196,NM_152284	chr8,chr8	-,+	ZFAND1,CHMP4C	-10720,113
chr2:20514287-20515025	chr2	+	20514286	20515065	True	NM_015317,NM_004040	chr2,chr2	-,+	PUM2,RHOB	12129,131769
chr9:80794156-80794526	chr9	+	80794182	80794526	True	NM_001098802,NM_002072	chr9,chr9	+,-	CEP78,GNAQ	56464,-147963
chr20:57593757-57594033	chr20	+	57593758	57593988	True	NM_001336,NM_030773	chr20,chr20	-,+	CTSZ,TUBB1	-11449,320
chr12:65671737-65672080	chr12	+	65671791	65672119	True	NM_007191,NM_001031679,NM_198080,NM_001193460,NM_001193461	chr12,chr12,chr12,chr12,chr12	-,+,+,+,+	WIF1,MSRB3,MSRB3,MSRB3,MSRB3	-156445,303,303,303,647
chr6:70455443-70456725	chr6	+	70455461	70456610	True	NM_018368,NM_001858	chr6,chr6	-,+	LMBRD1,COL19A1	50490,119837
chr11:32605657-32605868	chr11	+	32605694	32605846	True	NM_024426,NM_006360	chr11,chr11	-,+	WT1,EIF3M	-148613,-354
chr1:157018915-157019243	chr1	+	157019036	157019288	True	NM_198236,NM_014784,NR_001560	chr1,chr1,chr1	-,-,+	ARHGEF11,ARHGEF11,CYCSP52	-3874,-3874,78865
chr20:42150924-42151405	chr20	+	42151022	42151101	True	NM_001008901,NM_015478	chr20,chr20	-,+	GTSF1L,L3MBTL1	204594,-8007
chr13:114583814-114584153	chr13	+	114583834	114584190	True	NM_000820,NR_024609	chr13,chr13	-,+	GAS6,FLJ44054	-16788,2419
chr2:28975924-28976690	chr2	+	28975971	28976473	True	NM_206876,NM_017910,NM_002709	chr2,chr2,chr2	+,-,+	PPP1CB,TRMT61B,PPP1CB	-1415,116754,-1403
chrX:101966826-101967067	chrX	+	101967002	101967062	True	NM_030639,NM_001184875,NM_001184874,NM_001184876,NM_001004051,NM_138437,NM_001142528,NM_021992,NM_001142525,NM_001142524,NM_001142527,NM_001142526	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,+,+,-,+,+,+,+	BHLHB9,GPRASP2,GPRASP2,GPRASP2,GPRASP2,GPRASP2,BHLHB9,TMSB15A,BHLHB9,BHLHB9,BHLHB9,BHLHB9	8579,41,41,41,41,41,8579,-195303,8579,8579,8579,8579
chr11:44331212-44331423	chr11	+	44331216	44331438	True	NM_021926,NM_000401	chr11,chr11	-,+	ALX4,EXT2	328,-213520
chr4:15481658-15482434	chr4	+	15481659	15482457	True	NM_001193534,NM_001080522	chr4,chr4	-,+	FBXL5,CC2D2A	174628,-10221
chr19:40695025-40696340	chr19	+	40695793	40696081	True	NM_152479,NM_002446	chr19,chr19	-,+	TTC9B,MAP3K10	28275,1569
chr14:50160611-50161426	chr14	+	50161020	50161197	True	NM_172193,NM_001197330,NM_001197331,NM_002692	chr14,chr14,chr14,chr14	+,-,-,-	KLHDC1,POLE2,POLE2,POLE2	-1251,-5922,-5922,-5922
chr12:112846977-112847182	chr12	+	112847037	112847221	True	NM_002834,NM_000970,NM_001024662	chr12,chr12,chr12	+,-,-	PTPN11,RPL6,RPL6	9314,272,272
chr5:140052823-140053063	chr5	+	140052912	140053012	True	NM_017706,NM_194249	chr5,chr5	+,-	WDR55,DND1	-8579,209
chr1:236445555-236446948	chr1	+	236445657	236446657	True	NM_145861,NM_019891	chr1,chr1	+,-	EDARADD,ERO1LB	111022,-318
chr5:76153463-76154319	chr5	+	76153612	76154064	True	NR_003014,NM_130772	chr5,chr5	-,+	SNORA47,S100Z	222382,-7842
chr2:158866699-158867570	chr2	+	158866699	158867272	True	NM_001111067,NM_001135098	chr2,chr2	-,+	ACVR1,UPP2	-134325,-15066
chr16:67970055-67970328	chr16	+	67970131	67970355	True	NM_006742,NM_001907,NM_002801,NM_000229	chr16,chr16,chr16,chr16	+,-,-,-	PSKH1,CTRL,PSMB10,LCAT	-43007,-4353,475,7710
chr16:22447851-22448199	chr16	+	22447865	22448240	True	NR_027460,NR_027154	chr16,chr16	-,+	RRN3P3,LOC641298	846,88
chr16:22447851-22448199	chr16	-	29106462	29106625	False	NM_024816,NR_003369	chr16,chr16	-,+	RABEP2,RRN3P2	-169930,-20351
chr16:22447851-22448199	chr16	+	15165934	15165984	False	NM_015027,NM_173474	chr16,chr16	+,-	PDXDC1,NTAN1	-97152,-16101
chr16:22447851-22448199	chr16	+	21812990	21813062	False	NM_170664,NR_003370	chr16,chr16	+,-	OTOA,RRN3P1	-96757,17483
chrX:47483357-47484687	chrX	+	47483587	47484573	True	NM_001145252,NM_002621,NM_006950,NM_133499,NR_028119	chrX,chrX,chrX,chrX,chrX	-,-,-,-,+	CFP,CFP,SYN1,SYN1,LOC100133957	4846,5181,-4331,-4331,33658
chr6:84589197-84590578	chr6	+	84589292	84590607	True	NR_026669,NM_016230	chr6,chr6	-,+	SNAP91,CYB5R4	-170165,-19973
chr3:130102331-130104304	chr3	+	130102465	130104326	True	NR_024252,NR_022012	chr3,chr3	-,+	LOC729375,COL6A5	-272189,-38157
chr11:107879563-107879821	chr11	+	107879678	107879858	True	NM_017515,NM_003478	chr11,chr11	-,+	SLC35F2,CUL5	-149764,-321
chr1:41325798-41327004	chr1	+	41326086	41327020	True	NM_172163,NM_133467	chr1,chr1	+,-	KCNQ4,CITED4	-76453,1048
chr7:65008195-65009228	chr7	+	65008566	65009095	True	NM_000181,NR_027392	chr7,chr7	-,+	GUSB,INTS4L2	438257,103681
chr7:65008195-65009228	chr7	-	64612203	64612691	False	NR_027393,NM_001007253	chr7,chr7	+,-	INTS4L1,ERV3	-10661,-145079
chr7:65008195-65009228	chr7	-	65123385	65123914	False	NM_000181,NR_027392	chr7,chr7	-,+	GUSB,INTS4L2	323444,-10660
chr7:65008195-65009228	chr11	+	77667817	77667876	False	NM_003251,NM_033547	chr11,chr11	+,-	THRSP,INTS4	107030,37892
chr7:99070351-99070555	chr7	+	99070377	99070565	True	NM_213603,NM_001198879,NM_001003714,NM_001039178,NM_001003713,NM_001013258,NM_004889	chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,-,-,-,-,+,-	ZNF789,ATP5J2-PTCD1,ATP5J2,ATP5J2,ATP5J2,ZNF789,ATP5J2	45,-6553,-6553,-6553,-6553,45,-6553
chr1:226373574-226373842	chr1	+	226373596	226373878	True	NM_022735,NM_031944	chr1,chr1	-,+	ACBD3,MIXL1	595,37504
chr17:39553734-39554652	chr17	+	39554120	39554590	True	NM_002277,NM_030975	chr17,chr17	-,+	KRT31,KRTAP9-9	-276,-142539
chr5:77591202-77591530	chr5	+	77591384	77591508	True	NM_003664,NM_004866	chr5,chr5	-,+	AP3B1,SCAMP1	-856,64830
chr18:21033615-21035126	chr18	+	21033697	21034795	True	NM_003831,NM_032933	chr18,chr18	+,-	RIOK3,C18orf45	-964,-15772
chr7:24784498-24785605	chr7	+	24784719	24785566	True	NM_016447,NM_001127453	chr7,chr7	+,-	MPP6,DFNA5	-171693,11568
chr20:3452309-3453265	chr20	+	3452440	3453285	True	NM_139321,NM_001009984,NM_139322	chr20,chr20,chr20	+,-,+	ATRN,C20orf194,ATRN	-826,-64185,-826
chr12:122297432-122297784	chr12	+	122297436	122297780	True	NM_002813,NM_002150	chr12,chr12	+,-	PSMD9,HPD	28865,-667
chr19:40971299-40971505	chr19	+	40971303	40971497	True	NM_000713,NM_020971	chr19,chr19	-,+	BLVRB,SPTBN4	278,1628
chr11:61735501-61735787	chr11	+	61735513	61735781	True	NM_004183,NM_002032	chr11,chr11	+,-	BEST1,FTH1	-18208,-381
chr1:243989356-243990225	chr1	+	243989549	243990239	True	NM_181690,NR_033883	chr1,chr1	-,+	AKT3,LOC339529	16370,90464
chr8:41657389-41657644	chr8	+	41657449	41657684	True	NM_000037,NM_178819,NM_020475,NM_020476,NM_020477	chr8,chr8,chr8,chr8,chr8	-,+,-,-,-	ANK1,AGPAT6,ANK1,ANK1,ANK1	-2309,-221793,-2309,-2309,-2309
chr6:74231389-74232570	chr6	+	74231434	74232265	True	NM_001402,NM_133645	chr6,chr6	-,+	EEF1A1,MTO1	-679,-60031
chr2:219923211-219923544	chr2	+	219923224	219923528	True	NR_024385,NM_002181,NR_036081	chr2,chr2,chr2	+,-,-	LOC151300,IHH,MIR3131	-82269,1760,-2
chr3:170625557-170625926	chr3	+	170625649	170625777	True	NM_020390,NM_001185056	chr3,chr3	-,+	EIF5A2,CLDN11	699,-486673
chr19:5681928-5682388	chr19	+	5682010	5682290	True	NM_205767,NM_198708,NM_033643,NM_198533,NM_015414,NM_198706,NM_198707,NM_198704,NM_198705	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,+,+,+,+,+,+,+,+	C19orf70,HSD11B1L,RPL36,HSD11B1L,RPL36,HSD11B1L,HSD11B1L,HSD11B1L,HSD11B1L	-1099,-986,7981,-1014,8055,-986,-1009,-1026,-1026
chr17:5405908-5406790	chr17	+	5405912	5406810	True	NM_001162371,NM_024039	chr17,chr17	-,+	LOC728392,MIS12	-1593,-15716
chr19:45972996-45973543	chr19	+	45973132	45973368	True	NM_001114171,NM_006732,NM_206901	chr19,chr19,chr19	+,+,-	FOSB,FOSB,RTN2	-1930,-1930,23156
chr11:319752-319955	chr11	+	319826	319898	True	NM_021034,NM_003641	chr11,chr11	-,+	IFITM3,IFITM1	1066,-5886
chr8:143280581-143281290	chr8	+	143280879	143281233	True	NM_145003,NR_024378	chr8,chr8	-,+	TSNARE1,NCRNA00051	203360,-1213
chr13:111772996-111773431	chr13	+	111773008	111773384	True	NM_001113512,NM_145735,NM_001113511,NM_017664	chr13,chr13,chr13,chr13	+,+,+,-	ARHGEF7,ARHGEF7,ARHGEF7,ANKRD10	-5435,-5435,-5435,-205592
chr9:36571762-36572273	chr9	+	36571893	36572199	True	NM_014791,NM_194330	chr9,chr9	+,-	MELK,RNF38	705,-170698
chr2:11505334-11505899	chr2	+	11505403	11505830	True	NM_004850,NM_014668	chr2,chr2	-,+	ROCK2,GREB1	-20692,168411
chrX:53309901-53310689	chrX	+	53310154	53310368	True	NR_024449,NM_015075,NM_144968	chrX,chrX,chrX	-,-,+	IQSEC2,IQSEC2,RIBC1	478,478,139470
chr17:39381611-39382443	chr17	+	39381925	39382478	True	NM_031961,NM_031962,NM_033060	chr17,chr17,chr17	+,+,-	KRTAP9-2,KRTAP9-3,KRTAP4-1	421,6236,-40778
chr14:95077687-95078255	chr14	+	95077714	95078064	True	NM_001085,NM_173850	chr14,chr14	+,-	SERPINA3,SERPINA12	649,-93533
chr6:27775523-27776051	chr6	+	27775661	27775997	True	NM_003536,NM_003509,NM_003521,NM_003519,NM_021066	chr6,chr6,chr6,chr6,chr6	+,+,+,-,-	HIST1H3H,HIST1H2AI,HIST1H2BM,HIST1H2BL,HIST1H2AJ	1844,-21,6824,-26,6571
chr20:327383-327652	chr20	+	327438	327508	True	NM_153269,NM_024958	chr20,chr20	-,+	C20orf96,NRSN2	-56048,-119
chr12:49523316-49523915	chr12	+	49523521	49523935	True	NM_032704,NM_006082	chr12,chr12	+,-	TUBA1C,TUBA1B	134929,1419
chr21:10991953-10993159	chr21	+	10992080	10992759	True	NM_199260,NM_199261,NM_199259,NR_037458	chr21,chr21,chr21,chr21	-,-,-,+	TPTE,TPTE,TPTE,MIR3687	-1160,-1160,-1160,-1165933
chr12:53190952-53192255	chr12	+	53190956	53192082	True	NM_199187,NM_057088	chr12,chr12	+,-	KRT18,KRT3	150572,-1064
chr1:54520406-54520741	chr1	+	54520470	54520630	True	NM_004872,NM_153035	chr1,chr1	-,+	TMEM59,TCEANC2	-1359,-1255
chrX:152956748-152956981	chr16	-	32894034	32894521	False	NR_003083,NM_016212	chr16,chr16	-,+	SLC6A10P,TP53TG3	2417,310458
chrX:152956748-152956981	chr16	+	33780802	33781289	False	NR_033866,NM_001205265	chr16,chr16	-,+	LOC390705,TP53TG3B	-482100,-519158
chrX:152956748-152956981	chrX	+	152956763	152956949	True	NM_001039582,NM_001142806,NM_005629,NM_001142805	chrX,chrX,chrX,chrX	-,+,+,+	PNCK,SLC6A8,SLC6A8,SLC6A8	-16947,-1848,-3062,-3062
chr9:103972014-103973342	chr9	+	103972101	103972991	True	NM_001127610,NM_017753	chr9,chr9	-,+	BAAT,LPPR1	172868,-24836
chr8:133070208-133070696	chr8	+	133070213	133070303	True	NM_001080399,NM_015137	chr8,chr8	-,+	OC90,EFR3A	1374,-153915
chr13:111599497-111599951	chr13	+	111599604	111599984	True	NM_017664,NM_001113511	chr13,chr13	-,+	ANKRD10,ARHGEF7	-32188,167639
chr13:111599497-111599951	chr13	-	113087397	113087777	False	NM_006322,NM_145248	chr13,chr13	-,+	TUBGCP3,SPACA7	154754,-56797
chr1:55228106-55229798	chr1	+	55228269	55229763	True	NM_001110533,NM_152268	chr1,chr1	+,-	C1orf177,PARS2	41972,513
chr15:40669447-40669996	chr15	+	40669532	40669995	True	NM_001142762,NM_001142761,NM_207380,NM_033286	chr15,chr15,chr15,chr15	+,+,-,+	C15orf23,C15orf23,C15orf52,C15orf23	4926,4926,-36364,4926
chr1:159870065-159870913	chr1	+	159870157	159870820	True	NM_012337,NM_020125	chr1,chr1	-,+	CCDC19,SLAMF8	-251,-73729
chr15:34729620-34729923	chr15	+	34729885	34729971	True	NM_175741,NR_027409	chr15,chr15	+,-	C15orf55,GOLGA8A	-91870,-218
chr15:38857456-38859046	chr15	+	38857750	38858904	True	NM_005739,NM_173611,NM_001128602	chr15,chr15,chr15	-,+,-	RASGRP1,FAM98B,RASGRP1	-743,-111477,-743
chr9:136391629-136392025	chr9	+	136391643	136391799	True	NM_014694,NM_001080483,NM_001145320	chr9,chr9,chr9	+,-,+	ADAMTSL2,TMEM8C,ADAMTSL2	8175,-1575,5486
chr16:19566816-19567177	chr16	+	19566836	19567184	True	NM_020314,NM_016641	chr16,chr16	+,-	C16orf62,GDE1	-150,-33386
chr18:66490008-66491234	chr18	+	66490151	66491219	True	NM_024781,NM_019022	chr18,chr18	+,-	CCDC102B,TMX3	-24885,-107798
chr14:76618706-76618919	chr14	+	76618710	76618962	True	NM_017972,NM_003239,NM_017926	chr14,chr14,chr14	+,-,+	C14orf118,TGFB3,C14orf118	-502,-170618,-502
chrX:32279220-32280902	chrX	+	32279428	32280780	True	NM_203391,NM_004023	chrX,chrX	+,-	GK,DMD	-1608003,-105842
chr4:6641945-6642290	chr4	+	6642105	6642261	True	NM_033296,NM_203462	chr4,chr4	+,-	MRFAP1,MRFAP1L1	183,69395
chr15:60865811-60866290	chr15	+	60865858	60866292	True	NM_134262,NM_012182	chr15,chr15	-,+	RORA,FOXB1	18465,-569496
chr11:65081462-65081975	chr11	+	65081894	65081976	True	NM_001077241,NM_006779	chr11,chr11	-,+	SLC25A45,CDC42EP2	68216,354
chr6:58181380-58182366	chr6	+	58181407	58182332	True	NM_000947,NR_003660	chr6,chr6	+,-	PRIM2,GUSBP4	-999038,105443
chr6:58181380-58182366	chr6	-	26688502	26688830	False	NM_013375,NM_024639	chr6,chr6	+,-	ABT1,ZNF322A	-91383,-28539
chr12:49300920-49301655	chr12	+	49301068	49301629	True	NM_001143781,NM_033124	chr12,chr12	-,+	FKBP11,CCDC65	17086,-3227
chr17:62008410-62008704	chr17	+	62008436	62008736	True	NM_001164257,NM_001039933,NM_000626,NM_021602	chr17,chr17,chr17,chr17	+,-,-,-	C17orf72,CD79B,CD79B,CD79B	66974,1018,1018,1018
chr9:73432529-73433822	chr9	+	73432528	73433553	True	NR_029621,NM_015110	chr9,chr9	-,+	MIR204,SMC5	-7528,-558710
chr6:86388269-86388488	chr6	+	86388280	86388484	True	NM_002526,NR_003044,NR_002743,NR_003038	chr6,chr6,chr6,chr6	+,-,-,-	NT5E,SNORD50B,SNORD50A,SNHG5	-229031,-903,-1194,17
chr1:156695902-156696469	chr1	+	156695909	156696520	True	NM_030980,NM_015997,NM_001142560	chr1,chr1,chr1	-,+,+	ISG20L2,RRNAD1,RRNAD1	1238,1742,1742
chr11:19730058-19731235	chr11	+	19730144	19730570	True	NM_182964,NR_015384,NM_145117	chr11,chr11,chr11	+,-,+	NAV2,LOC100126784,NAV2	4310,5626,4310
chr1:23567976-23569371	chr1	+	23568103	23569343	True	NR_033690,NM_000864	chr1,chr1	+,-	C1orf213,HTR1D	126120,-46881
chr3:169485993-169486406	chr3	+	169486023	169486265	True	NR_001566,NM_001185118,NR_033703,NR_033702,NM_018657,NM_032487,NM_001185119	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,+,+,+,-,+	TERC,MYNN,MYNN,MYNN,MYNN,ARPM1,MYNN	-3175,4587,4587,4587,4587,1468,5787
chr13:93928540-93928839	chr13	+	93928545	93928854	True	NM_001129889,NM_005708	chr13,chr13	-,+	DCT,GPC6	1203132,-49518
chr2:241760905-241762595	chr2	+	241760994	241762637	True	NM_000030,NM_004321	chr2,chr2	+,-	AGXT,KIF1A	45524,-1370
chr13:26829210-26830638	chr13	+	26829273	26830405	True	NM_001260,NM_005977	chr13,chr13	+,-	CDK8,RNF6	-568,-32765
chr17:7307502-7307721	chr17	+	7307514	7307766	True	NM_152766,NR_037719,NM_020795,NM_001201576,NM_020360	chr17,chr17,chr17,chr17,chr17	-,-,+,-,-	C17orf61,C17orf61-PLSCR3,NLGN2,PLSCR3,PLSCR3	-64,-64,3735,-9352,-9352
chr7:104913584-104914810	chr7	+	104913706	104914415	True	NM_021930,NM_182691	chr7,chr7	+,-	RINT1,SRPK2	258116,-4229
chr8:95949591-95950932	chr8	+	95949780	95950773	True	NM_152416,NM_001135733	chr8,chr8	+,-	C8orf38,TP53INP1	86447,10892
chrX:38663485-38663692	chrX	+	38663485	38663669	True	NM_001034853,NM_001098790,NM_001098791,NM_021242	chrX,chrX,chrX,chrX	-,+,+,+	RPGR,MID1IP1,MID1IP1,MID1IP1	-476697,-2851,-2851,-463
chr19:55896076-55896278	chr19	+	55896075	55896209	True	NM_139172,NM_001190764,NM_000991,NM_001136135,NM_001136134,NM_001136137,NM_001136136	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+,+	TMEM190,LOC388564,RPL28,RPL28,RPL28,RPL28,RPL28	-7922,-448,1090,1090,1090,1090,1090
chr11:34074221-34074445	chr11	+	34074238	34074472	True	NM_203364,NM_005574,NM_005898	chr11,chr11,chr11	+,-,+	CAPRIN1,LMO2,CAPRIN1	-1059,-160402,-1059
chr17:15844789-15845355	chr17	+	15845056	15845269	True	NM_000676,NM_001042697	chr17,chr17	+,-	ADORA2B,ZSWIM7	2961,57794
chr6:106958706-106959766	chr6	+	106958727	106959435	True	NM_032730,NM_001624	chr6,chr6	-,+	RTN4IP1,AIM1	117988,294
chr1:209956361-209956835	chr1	+	209956367	209956755	True	NM_025228,NM_152485	chr1,chr1	+,-	TRAF3IP3,C1orf74	-27024,1185
chr17:36514784-36515953	chr17	+	36514921	36515602	True	NM_001004334,NM_014598	chr17,chr17	-,+	GPR179,SOCS7	-15228,-6965
chr11:128760672-128761035	chr11	+	128760770	128760944	True	NM_000890,NM_145013	chr11,chr11	+,-	KCNJ5,C11orf45	368,14698
chr9:67678006-67678605	chr9	+	67678308	67678384	True	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	115855,248376
chr4:25856686-25857256	chr4	+	25856713	25857053	True	NM_001145432,NM_015187	chr4,chr4	+,-	C4orf52,SEL1L3	58760,7621
chr10:43979066-43979610	chr10	+	43979605	43979659	True	NR_026693,NM_001098204	chr10,chr10	+,-	ZNF487P,HNRNPF	-47082,-74909
chr1:235289606-235289839	chr1	+	235289734	235289853	True	NM_001037277,NR_002956,NM_014765	chr1,chr1,chr1	+,-,-	GGPS1,SNORA14B,TOMM20	201899,1456,2460
chr3:121292047-121293597	chr3	+	121292805	121293527	True	NM_001012659,NM_199420	chr3,chr3	+,-	ARGFX,POLQ	-6082,-27952
chr7:66134845-66135755	chr7	+	66134844	66135533	True	NM_153033,NR_002933	chr7,chr7	+,-	KCTD7,LOC493754	-41027,-91346
chr17:66285698-66286094	chr17	+	66285715	66286005	True	NM_004694,NM_001174166,NM_014960	chr17,chr17,chr17	-,-,+	SLC16A6,SLC16A6,ARSG	1450,1450,-30449
chr14:24767904-24768672	chr14	+	24767967	24768597	True	NM_138452,NM_174913,NM_001136050	chr14,chr14,chr14	-,+,-	DHRS1,C14orf21,DHRS1	119,500,492
chr5:134182175-134183076	chr5	+	134182212	134182965	True	NM_152409,NM_002653,NM_001135586	chr5,chr5,chr5	+,-,+	C5orf24,PITX1,C5orf24	-893,187059,-605
chr6:11095137-11095715	chr6	+	11095137	11095480	True	NM_001135575,NM_207582	chr6,chr6	+,-	LOC221710,ERVFRDE1	-926,16652
chr13:50702030-50702273	chr13	+	50702067	50702297	True	NR_002612,NR_002183	chr13,chr13	-,+	DLEU2,ST13P4	-2390,43856
chr3:2928354-2930244	chr3	+	2928711	2930282	True	NM_000564,NM_182916	chr3,chr3	-,+	IL5RA,TRNT1	221826,238317
chr2:34216803-34218668	chr2	+	34217139	34218600	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-478255,-263855
chr22:50492466-50493090	chr22	+	50492547	50493127	True	NM_139202,NM_001164104	chr22,chr22	-,+	MLC1,MOV10L1	30704,35307
chr14:77497366-77498974	chr14	+	77497434	77498858	True	NM_024496,NM_033426	chr14,chr14	-,+	IRF2BPL,KIAA1737	-2400,65719
chr1:207821509-207822554	chr1	+	207821700	207822554	True	NM_175710,NR_029832	chr1,chr1	+,-	CR1L,MIR29C	-3297,152780
chr3:69939555-69941482	chr3	+	69939571	69941519	True	NM_015123,NM_198177	chr3,chr3	-,+	FRMD4B,MITF	-504141,-24260
chr4:177246498-177247170	chr4	+	177246505	177246873	True	NM_021928,NM_080874	chr4,chr4	+,-	SPCS3,ASB5	-5479,-56132
chrX:148620030-148620640	chrX	+	148620070	148620646	True	NM_001171909,NM_001171907,NM_178124,NM_001171908,NR_027455	chrX,chrX,chrX,chrX,chrX	+,+,+,+,-	CXorf40A,CXorf40A,CXorf40A,CXorf40A,LOC100131434	5419,1872,1872,1872,716
chrX:148620030-148620640	chrX	-	149109263	149109503	False	NR_027456,NM_001013845	chrX,chrX	+,-	LOC100272228,CXorf40B	-2548,-2547
chr19:43575236-43576010	chr19	+	43575247	43576051	True	NR_036584,NM_031246	chr19,chr19	+,-	LOC100289650,PSG2	-249283,10892
chr4:49501-50192	chr4	+	49523	50185	True	NM_182524,NM_001039127,NM_001137608	chr4,chr4,chr4	+,+,-	ZNF595,ZNF718,ZNF732	3041,3091,239809
chr16:23606624-23607267	chr16	+	23606664	23607160	True	NM_019116,NM_005003	chr16,chr16	+,-	UBFD1,NDUFAB1	-37853,529
chr5:141703627-141704114	chr5	+	141703697	141704083	True	NM_030571,NM_001127496,NM_030964	chr5,chr5,chr5	+,-,-	NDFIP1,SPRY4,SPRY4	-215425,587,587
chrX:144904848-144905497	chrX	+	144904858	144905408	True	NM_004709,NM_032539,NM_001144010,NM_001144003,NM_001144004,NM_001144005,NM_001144006,NR_030589,NM_001144008,NM_001144009	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,+,+,-,+,+	CXorf1,SLITRK2,SLITRK2,SLITRK2,SLITRK2,SLITRK2,SLITRK2,MIR890,SLITRK2,SLITRK2	3519,-5562,-2043,-5562,-5562,-5562,-2043,170517,-2043,-2043
chr4:982480-982723	chr4	+	982529	982711	True	NM_022042,NM_000203,NM_134425,NM_213613	chr4,chr4,chr4,chr4	-,+,-,-	SLC26A1,IDUA,SLC26A1,SLC26A1	4522,-1795,4522,4563
chr1:87380969-87381170	chr1	+	87380983	87381219	True	NM_001134492,NM_004261,NM_012262,NM_203341	chr1,chr1,chr1,chr1	+,-,+,-	HS2ST1,SEP15,HS2ST1,SEP15	-699,-876,-699,-876
chr1:44435052-44435440	chr1	+	44435344	44435446	True	NM_001384,NM_003780,NM_004047,NM_001039457,NM_006934,NM_001039589	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,-,+	DPH2,B4GALT2,ATP6V0B,ATP6V0B,SLC6A9,DPH2	206,9419,5155,5155,47601,206
chr3:49852971-49854423	chr3	+	49853205	49854107	True	NM_003335,NM_203370	chr3,chr3	-,+	UBA7,C3orf54	-1814,-12575
chr19:40792268-40792688	chr19	+	40792356	40792696	True	NM_001031696,NR_030371,NM_001626	chr19,chr19,chr19	+,-,-	PLD3,MIR641,AKT2	61635,-3808,-1091
chr21:15669583-15670132	chr21	+	15669626	15670148	True	NM_006948,NR_003087	chr21,chr21	-,+	HSPA13,ABCC13	85411,-23564
chr2:242294849-242295690	chr2	+	242294964	242295608	True	NM_005336,NM_014808	chr2,chr2	-,+	HDLBP,FARP2	-39710,55
chr7:44797589-44798094	chr7	+	44797684	44798028	True	NM_174929,NM_031449,NM_138635	chr7,chr7,chr7	+,+,-	ZMIZ2,ZMIZ2,H2AFV	-1948,-9205,89747
chr9:93591091-93591720	chr9	+	93591144	93591748	True	NM_017594,NM_001174167	chr9,chr9	-,+	DIRAS2,SYK	-186036,-1490
chr2:748601-749480	chr2	+	748708	749504	True	NM_018968,NM_152834	chr2,chr2	+,-	SNTG2,TMEM18	197049,-71269
chr20:44171318-44173295	chr20	+	44171327	44173330	True	NM_020398,NM_080827,NM_006103,NM_001198986	chr20,chr20,chr20,chr20	-,-,+,-	SPINLW1,WFDC6,WFDC2,SPINLW1-WFDC6	2786,-3193,-72984,2786
chr20:5929401-5930697	chr20	+	5929454	5930573	True	NM_182802,NM_032485,NM_015939	chr20,chr20,chr20	+,+,-	MCM8,MCM8,TRMT6	724,724,650
chr5:148407967-148409293	chr5	+	148408203	148409313	True	NM_024577,NM_014945	chr5,chr5	-,+	SH3TC2,ABLIM3	33474,111740
chr14:71276385-71276595	chr14	+	71276473	71276635	True	NM_033141,NM_014982	chr14,chr14	-,+	MAP3K9,PCNX	-585,97486
chrX:101971117-101971479	chrX	+	101971196	101971516	True	NM_030639,NM_001184875,NM_001184874,NM_001184876,NM_001004051,NM_138437,NM_001142528,NM_021992,NM_001142525,NM_001142524,NM_001142527,NM_001142526	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,+,+,-,+,+,+,+	BHLHB9,GPRASP2,GPRASP2,GPRASP2,GPRASP2,GPRASP2,BHLHB9,TMSB15A,BHLHB9,BHLHB9,BHLHB9,BHLHB9	4125,-4143,-4143,-4143,-4143,-4143,4125,-199497,4125,4125,4125,4125
chr16:15030171-15031622	chr16	+	15030698	15030766	True	NR_023387,NM_006985	chr16,chr16	-,+	ABCC6P2,NPIP	-112139,533
chr16:15030171-15031622	chr16	-	15472684	15472752	False	NM_001128423,NR_037466	chr16,chr16	+,-	MPV17L,MIR3180-4	16858,-223825
chr15:41098708-41099348	chr15	+	41098802	41099207	True	NM_018163,NM_001077268	chr15,chr15	-,+	DNAJC17,ZFYVE19	526,66
chr12:5247547-5248586	chr12	+	5247639	5248630	True	NM_006422,NM_002234	chr12,chr12	-,+	AKAP3,KCNA5	-493296,-94618
chr16:19568998-19569295	chr16	+	19569000	19569100	True	NM_020314,NM_016641	chr16,chr16	+,-	C16orf62,GDE1	-2316,-35550
chr20:42815054-42815506	chr20	+	42815057	42815555	True	NM_024034,NM_175913,NM_020433	chr20,chr20,chr20	+,-,-	GDAP1L1,JPH2,JPH2	60352,713,713
chr1:151008811-151009289	chr1	+	151008846	151009303	True	NM_138278,NM_001038707,NM_001159642	chr1,chr1,chr1	+,-,+	BNIPL,CDC42SE1,BNIPL	-43,22872,-43
chr11:126153182-126153397	chr11	+	126153238	126153412	True	NM_148910,NM_003139,NM_001039661	chr11,chr11,chr11	+,-,+	TIRAP,SRPR,TIRAP	-307,-14361,-307
chr19:17488313-17488729	chr19	+	17488375	17488643	True	NM_031310,NM_133644	chr19,chr19	-,+	PLVAP,GTPBP3	-238,-40100
chr9:104294353-104295767	chr9	+	104294781	104295816	True	NM_019592,NM_032342	chr9,chr9	+,-	RNF20,C9orf125	316,-45306
chr4:77118130-77118948	chr4	+	77118458	77118980	True	NM_001204255,NM_001136570	chr4,chr4	-,+	SCARB2,FAM47E	16122,53872
chr15:57998447-57998795	chr15	+	57998500	57998834	True	NM_001018102,NM_015532,NM_170697,NR_027390	chr15,chr15,chr15,chr15	+,+,-,+	GRINL1A,GRINL1A,ALDH1A2,GRINL1A	66,66,307451,66
chr19:49142238-49142585	chr19	+	49142262	49142622	True	NM_001217,NM_001352,NR_004401	chr19,chr19,chr19	-,-,+	CA11,DBP,SEC1	6879,-1623,-1017
chr19:1267863-1268072	chr19	+	1267904	1268120	True	NR_027271,NM_017914,NR_023313,NM_001280,NR_023312	chr19,chr19,chr19,chr19,chr19	-,+,+,+,+	C19orf23,C19orf24,CIRBP,CIRBP,CIRBP	2189,7399,1146,1146,1146
chr1:75199179-75199494	chr1	+	75199306	75199534	True	NM_001134759,NM_001162916,NM_001130043,NM_001130042,NR_027962,NM_138467,NM_001889	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,+,-,-,+,+,-	CRYZ,TYW3,CRYZ,CRYZ,TYW3,TYW3,CRYZ	-214,-528,-214,-214,-502,-524,-214
chr6:6318783-6320432	chr6	+	6318816	6320194	True	NM_000129,NM_004271	chr6,chr6	-,+	F13A1,LY86	780,268739
chr4:39981669-39982937	chr4	+	39982433	39982531	True	NM_001100399,NM_001100400,NM_018177	chr4,chr4,chr4	-,-,+	PDS5A,PDS5A,N4BP2	-2857,-2857,75992
chr10:71907927-71909122	chr10	+	71908054	71909176	True	NM_018649,NM_001040273,NM_173555	chr10,chr10,chr10	+,-,-	H2AFY2,TYSND1,TYSND1	-95748,-1558,-1558
chr2:231574724-231575470	chr2	+	231574863	231574967	True	NM_001130850,NM_005683,NM_001130849,NM_016289	chr2,chr2,chr2,chr2	+,-,+,+	CAB39,GPR55,CAB39,CAB39	3295,215028,3295,2589
chr4:89080409-89081855	chr4	+	89080455	89081606	True	NM_000297,NM_004827	chr4,chr4	+,-	PKD2,ABCG2	-151707,-444
chr14:74057554-74057970	chr14	+	74057653	74057723	True	NM_152331,NM_203309	chr14,chr14	+,-	ACOT4,HEATR4	686,-32002
chr17:4334496-4334946	chr17	+	4334692	4334994	True	NM_003342,NM_182538	chr17,chr17	-,+	UBE2G1,SPNS3	-64723,2224
chr3:29319823-29320865	chr3	+	29319909	29320881	True	NM_014483,NM_001003793,NM_001003792,NM_001177712,NM_001134433,NM_001177711	chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,-,+	RBMS3,RBMS3,RBMS3,RBMS3,AZI2,RBMS3	1921,1921,1921,1921,-929291,1921
chr1:113258497-113258935	chr1	+	113258533	113258951	True	NM_001042678,NM_001042679,NM_175744,NM_001004440,NM_005167,NM_182759	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,+	RHOC,RHOC,RHOC,FAM19A3,PPM1J,FAM19A3	-8508,-8855,-8508,4237,-583,4237
chr19:5915643-5915950	chr19	+	5915860	5915924	True	NR_034166,NM_004058,NM_080590	chr19,chr19,chr19	-,+,+	NDUFA11,CAPS,CAPS	-11836,-1718,-1718
chr16:2207863-2208187	chr16	+	2207921	2208225	True	NR_002736,NM_014353,NM_032271	chr16,chr16,chr16	-,+,+	SNORD60,RAB26,TRAF7	-2815,-9321,-2173
chr17:60884409-60885014	chr17	+	60884411	60884926	True	NM_001100875,NM_152598,NR_036146	chr17,chr17,chr17	-,-,+	MARCH10,MARCH10,MIR548W	-400,836,-85606
chr5:60930249-60930728	chr5	+	60930253	60930771	True	NM_001048249,NM_173667	chr5,chr5	-,+	C5orf43,FLJ37543	-471951,2864
chr1:150955109-150955925	chr1	+	150955118	150955901	True	NM_003568,NM_022075,NM_181746	chr1,chr1,chr1	+,-,-	ANXA9,LASS2,LASS2	-670,-7678,-7678
chr1:40564082-40564698	chr1	+	40564483	40564605	True	NM_001142604,NM_006367,NM_000310	chr1,chr1,chr1	-,+,-	PPT1,CAP1,PPT1	-1341,-58283,-1341
chr20:1592444-1592686	chr20	+	1592446	1592564	True	NM_001135844,NM_001083910,NM_006065,NM_001040022	chr20,chr20,chr20,chr20	-,-,-,+	SIRPB1,SIRPB1,SIRPB1,SIRPA	8175,8175,8175,282248
chr12:130821528-130821948	chr12	+	130821608	130821880	True	NR_033834,NM_004764,NM_001190971	chr12,chr12,chr12	-,+,+	FLJ31485,PIWIL1,PIWIL1	-175385,552,552
chr12:14927548-14927889	chr12	+	14927550	14927906	True	NM_177925,NR_027716,NM_175054	chr12,chr12,chr12	+,+,-	H2AFJ,H2AFJ,HIST4H4	-331,-331,-3485
chr2:203777472-203777822	chr7	-	123172450	123172720	False	NM_080928,NM_178827	chr7,chr7	+,-	ASB15,IQUB	76391,2048
chr2:203777472-203777822	chr2	+	203777534	203777853	True	NM_024744,NM_018256,NM_001104586	chr2,chr2,chr2	+,-,+	ALS2CR8,WDR12,ALS2CR8	-468,-585,-607
chr19:58329841-58330875	chr19	+	58329873	58330924	True	NR_024162,NM_001204818,NM_024762	chr19,chr19,chr19	-,+,-	FKBP1AP1,LOC100293516,ZNF552	7956,10737,-3592
chr19:58329841-58330875	chr19	-	58428541	58428753	False	NM_032828,NM_152475	chr19,chr19	+,-	ZNF587,ZNF417	-67411,-563
chr1:22328337-22329061	chr1	+	22328470	22328544	True	NM_005529,NM_005747	chr1,chr1	-,+	HSPG2,CELA3A	-64720,-373
chr12:93409367-93410205	chr12	+	93409570	93410248	True	NM_001004330,NM_003566	chr12,chr12	+,-	PLEKHG7,EEA1	-279365,-86463
chr20:48731525-48732614	chr20	+	48731882	48732592	True	NM_021988,NM_001032288,NM_022442,NM_005194,NM_199144	chr20,chr20,chr20,chr20,chr20	-,-,-,+,-	UBE2V1,UBE2V1,UBE2V1,CEBPB,UBE2V1	46,-2172,43,74783,46
chr17:39942185-39942570	chr17	+	39942185	39942513	True	NM_002230,NM_021991,NM_021939	chr17,chr17,chr17	-,-,+	JUP,JUP,FKBP10	501,501,26448
chr18:55288769-55289022	chr18	+	55288843	55289071	True	NM_004852,NM_004539	chr18,chr18	+,-	ONECUT2,NARS	-185977,156
chr10:13201984-13202457	chr10	+	13201987	13202505	True	NM_018518,NM_145314,NM_182751	chr10,chr10,chr10	+,-,+	MCM10,UCMA,MCM10	1048,73875,1048
chr11:113648655-113649729	chr11	+	113648799	113649255	True	NM_001101389,NM_004724	chr11,chr11	+,-	CLDN25,ZW10	1262,-4374
chr16:75657517-75657855	chr16	+	75657527	75657611	True	NR_036460,NM_012091,NM_018975	chr16,chr16,chr16	-,-,+	ADAT1,ADAT1,TERF2IP	-306,-306,24023
chr3:190242590-190244067	chr3	+	190243042	190244112	True	NM_001167931,NM_207316	chr3,chr3	+,-	IL1RAP,TMEM207	-11260,-75377
chr10:17686412-17687181	chr10	+	17686686	17686960	True	NM_003473,NM_014241,NR_037774	chr10,chr10,chr10	+,-,+	STAM,PTPLA,STAM	-613,-27313,-613
chr6:6796950-6797345	chr6	+	6797160	6797326	True	NM_004271,NR_026970	chr6,chr6	+,-	LY86,LY86-AS1	-208277,-174101
chr6:110479240-110480763	chr6	+	110479797	110480763	True	NM_001024934,NM_015891	chr6,chr6	-,+	WASF1,CDC40	20494,20860
chr4:170535773-170536541	chr4	+	170535830	170536307	True	NM_001199398,NM_001199399,NM_001829,NM_001199397,NM_012224,NM_173872,NM_001199400	chr4,chr4,chr4,chr4,chr4,chr4,chr4	-,-,+,-,-,+,-	NEK1,NEK1,CLCN3,NEK1,NEK1,CLCN3,NEK1	-2052,-2052,5414,-2052,-2052,5414,-2052
chr6:131389317-131389601	chr6	+	131389316	131389615	True	NM_001431,NM_016377,NM_001199388,NM_001135554,NM_001135555	chr6,chr6,chr6,chr6,chr6	-,+,-,-,-	EPB41L2,AKAP7,EPB41L2,EPB41L2,EPB41L2	-4854,76845,-4900,-4854,-4900
chr9:133528802-133529314	chr9	+	133528883	133529160	True	NR_027440,NM_021619	chr9,chr9	-,+	LOC100272217,PRDM12	-74002,10820
chr20:34115882-34116847	chr20	+	34116064	34116706	True	NM_015966,NR_026933,NM_001145350	chr20,chr20,chr20	+,-,-	ERGIC3,C20orf173,C20orf173	13071,825,825
chr14:62495938-62497023	chr14	+	62496237	62497027	True	NM_031914,NM_001017970	chr14,chr14	+,-	SYT16,TMEM30B	-33755,-747707
chr11:120214897-120216132	chr11	+	120215019	120216012	True	NM_012101,NM_001198665,NM_015313	chr11,chr11,chr11	-,+,+	TRIM29,ARHGEF12,ARHGEF12	-206156,-7466,-7466
chr3:10334176-10334544	chr3	+	10334181	10334593	True	NM_001134941,NM_001134946,NM_001134944,NM_001134945,NR_026829,NR_024138,NR_004431,NR_024146,NM_016362,NR_024145,NR_024144,NR_024132,NR_024133,NR_024134,NR_024135,NR_024136,NR_024137	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,+,-,+,+,-,+,+,-,-,-,-,-,-	GHRL,GHRL,GHRL,GHRL,C3orf42,GHRL,GHRLOS,GHRLOS,GHRL,GHRLOS,GHRLOS,GHRL,GHRL,GHRL,GHRL,GHRL,GHRL	-1762,88,88,88,-8132,88,-6797,-6797,-1762,-6797,-6797,88,88,88,88,88,88
chr6:155771346-155772203	chr6	+	155771406	155772094	True	NM_015718,NM_001001346	chr6,chr6	-,+	NOX3,CLDN20	5005,-186325
chr22:37545910-37546299	chr22	+	37545968	37546346	True	NM_000878,NM_024681	chr22,chr22	-,+	IL2RB,KCTD17	-6,-98240
chr11:68048211-68049436	chr11	+	68048340	68049483	True	NM_022338,NM_002335	chr11,chr11	-,+	C11orf24,LRP5	-8871,30624
chr12:7061583-7061860	chr12	+	7061639	7061909	True	NM_138425,NM_080548,NM_080549,NR_003010,NM_002831	chr12,chr12,chr12,chr12,chr12	+,+,+,-,+	C12orf57,PTPN6,PTPN6,SCARNA12,PTPN6	-8487,-5950,-1256,14910,-1256
chr7:103848077-103848446	chr7	+	103848101	103848345	True	NM_002553,NM_199000,NM_181747	chr7,chr7,chr7	-,+,-	ORC5,LHFPL3,ORC5	200,120758,200
chr11:73088703-73090243	chr11	+	73088805	73090287	True	NM_152222,NM_032871,NM_015159	chr11,chr11,chr11	+,+,-	RELT,RELT,FAM168A	-1451,-1143,218991
chr10:25306016-25306323	chr10	+	25306027	25306359	True	NM_145010,NM_024838	chr10,chr10	-,+	ENKUR,THNSL1	-997,-570
chr2:15746354-15747365	chr2	+	15746354	15747395	True	NM_004939,NM_015909	chr2,chr2	+,-	DDX1,NBAS	-14635,-44900
chr8:104030891-104031636	chr8	+	104030915	104031434	True	NM_001695,NR_027071	chr8,chr8	+,-	ATP6V1C1,C8orf56	1813,122187
chr1:112185685-112187070	chr1	+	112185848	112187106	True	NM_002884,NR_034126	chr1,chr1	+,-	RAP1A,LOC100129269	-23500,-34908
chr11:64729106-64730453	chr11	+	64729730	64730310	True	NM_001037225,NM_006244	chr11,chr11	-,+	C11orf85,PPP2R5B	-2121,-37638
chr5:60458504-60458821	chr5	+	60458587	60458847	True	NM_001048249,NM_020928	chr5,chr5	-,+	C5orf43,ZSWIM6	-285,169252
chr1:120438803-120439063	chr1	+	120438864	120439030	True	NM_021794,NM_006623	chr1,chr1	-,+	ADAM30,PHGDH	167,-184501
chr17:27068493-27068990	chr17	+	27068509	27068989	True	NM_004295,NM_001160407	chr17,chr17	+,-	TRAF4,TLCD1	2033,-14560
chr3:63264080-63264372	chr3	+	63264122	63264254	True	NM_001130003,NM_183394	chr3,chr3	+,-	SYNPR,CADPS	-259,-403058
chr4:146401259-146402684	chr4	+	146401912	146402697	True	NM_001003688,NM_005900,NM_001102653	chr4,chr4,chr4	+,+,-	SMAD1,SMAD1,OTUD4	1259,253,-301080
chr1:155659876-155660789	chr1	+	155659876	155660520	True	NM_001199849,NM_001198903,NM_004632,NM_018253,NM_001198902,NM_033657,NM_001199851,NM_001199850,NM_139121,NM_001198900,NM_001198901,NM_139118,NM_139119,NM_001198904,NM_001198905,NM_001198906	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,-,+,-,-,+,+,+,-,-,-,-,-,-,-,-	DAP3,YY1AP1,DAP3,YY1AP1,YY1AP1,DAP3,DAP3,DAP3,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1	-1053,-1429,-1050,-1308,-1361,-1050,-1053,-1053,-1112,-1308,-1057,-1053,-1311,-1429,-1308,-1053
chr3:148581698-148582455	chr3	+	148581725	148582269	True	NM_001870,NM_003071	chr3,chr3	+,-	CPA3,HLTF	773,222126
chr7:45040251-45041108	chr7	+	45040303	45041042	True	NR_003697,NR_030770,NM_031443,NM_001167935,NM_001167934	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	C7orf40,CCM2,CCM2,CCM2,CCM2	-14044,-1009,-567,-567,-567
chr6:52432843-52433284	chr6	+	52432883	52433294	True	NM_012288,NR_024403	chr6,chr6	-,+	TRAM2,LOC730101	8619,95904
chr16:30195643-30196535	chr16	+	30195882	30196580	True	NR_037608,NR_037609,NM_001014999,NM_007074,NM_001015000,NM_024044,NM_001031827,NR_002454,NM_001039182,NM_178044,NM_001193333	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,+,-,+,-,+,+	SLX1A-SULT1A3,SLX1B-SULT1A4,SLX1A,CORO1A,SLX1A,SLX1B,BOLA2,LOC606724,BOLA2B,SLX1B,CORO1A	9173,9173,8583,-1202,8583,8583,9097,3424,9097,8583,-1202
chr16:2184049-2184445	chr16	+	2184310	2184394	True	NM_001009944,NM_000296,NR_037467,NM_014353	chr16,chr16,chr16,chr16	-,-,-,+	PKD1,PKD1,MIR3180-5,RAB26	1555,1555,1786,14256
chr16:2184049-2184445	chr16	+	18494245	18494295	False	NR_036142,NR_003569,NR_036141,NR_036144	chr16,chr16,chr16,chr16	-,+,-,-	MIR3180-2,ABCC6P1,MIR3180-1,MIR3180-3	1879,88274,1883,1883
chr16:2184049-2184445	chr16	-	16405565	16405615	False	NR_036142,NR_036447,NR_036141,NM_001079528,NR_036144	chr16,chr16,chr16,chr16,chr16	+,+,+,-,+	MIR3180-2,PKD1P1,MIR3180-1,ABCC6,MIR3180-3	-1880,5850,-1884,-88237,-1884
chr16:2184049-2184445	chr16	-	15006875	15006959	False	NR_036142,NR_023387,NR_036141,NR_036144	chr16,chr16,chr16,chr16	+,-,+,+	MIR3180-2,ABCC6P2,MIR3180-1,MIR3180-3	-1845,-88316,-1849,-1849
chr16:2184049-2184445	chr16	+	15247011	15247095	False	NM_015027,NR_037466	chr16,chr16	+,-	PDXDC1,MIR3180-4	-178229,1814
chr15:43625339-43626545	chr15	+	43625761	43626485	True	NM_001159280,NM_014793,NM_001012969	chr15,chr15,chr15	+,-,+	ADAL,LCMT2,ADAL	-2950,-2941,-2950
chr16:30193323-30194350	chr16	+	30193324	30194374	True	NR_002454,NM_001193333,NM_001031827,NM_007074	chr16,chr16,chr16,chr16	+,+,-,+	LOC606724,CORO1A,BOLA2,CORO1A	5630,356,11303,356
chr3:42305304-42306225	chr3	+	42305402	42305996	True	NM_014965,NM_000729,NM_001174138	chr3,chr3,chr3	+,-,-	TRAK1,CCK,CCK	-103798,1716,37
chr8:30600831-30601320	chr8	+	30600979	30601321	True	NM_005671,NM_001195104	chr8,chr8	+,-	UBXN8,GSR	368,-15493
chr1:145576276-145576522	chr1	+	145576416	145576494	True	NM_006099,NM_001012758	chr1,chr1	+,-	PIAS3,NUDT17	-479,12991
chr1:161135224-161135654	chr1	+	161135232	161135603	True	NM_000309,NM_001199873,NM_012475,NM_001014443,NM_001122764	chr1,chr1,chr1,chr1,chr1	+,-,+,+,+	PPOX,B4GALT3,USP21,USP21,PPOX	577,12205,-6029,-6029,577
chr18:61461218-61461778	chr18	+	61461495	61461655	True	NM_003784,NM_006919	chr18,chr18	+,-	SERPINB7,SERPINB3	-18941,-132298
chr15:77721108-77721404	chr15	+	77721326	77721392	True	NM_018200,NM_024776	chr15,chr15	+,-	HMG20A,PEAK1	-8143,-143993
chr1:95696536-95697760	chr1	+	95696600	95697559	True	NR_037643,NM_001199682,NM_015485,NM_001128142,NM_144988	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	RWDD3,RWDD3,RWDD3,RWDD3,ALG14	2151,2151,2151,2151,-158093
chr12:8786973-8787641	chr12	+	8787009	8787633	True	NM_020661,NM_020734	chr12,chr12	-,+	AICDA,RIMKLB	-21567,62884
chr12:120683445-120684580	chr12	+	120683628	120683857	True	NM_025157,NM_012240	chr12,chr12	-,+	PXN,SIRT4	4159,56266
chr6:101300181-101300691	chr6	+	101300218	101300725	True	NM_001166247,NM_006828	chr6,chr6	+,-	GRIK2,ASCC3	546135,28549
chr16:67843824-67844243	chr16	+	67843885	67844237	True	NM_018430,NM_020850	chr16,chr16	+,-	TSNAXIP1,RANBP10	-2940,-3330
chr17:3748150-3748912	chr17	+	3748241	3748895	True	NM_018553,NM_031965,NM_001114118	chr17,chr17,chr17	-,+,-	C17orf85,GSG2,C17orf85	695,-121106,695
chr16:69143734-69144074	chr16	+	69143738	69144036	True	NM_138612,NM_001199280,NM_005329,NM_001040146	chr16,chr16,chr16,chr16	+,+,+,-	HAS3,HAS3,HAS3,CHTF8	-3660,-4322,-2346,22076
chr7:105516886-105517125	chr7	+	105516974	105517036	True	NM_020725,NM_152750,NM_152749	chr7,chr7,chr7	-,+,-	ATXN7L1,CDHR3,ATXN7L1	45,86620,45
chr2:74714638-74715911	chr2	+	74714718	74715785	True	NM_032779,NR_027749,NM_022492	chr2,chr2,chr2	-,+,+	CCDC142,TTC31,TTC31	-4361,-4569,-4569
chr7:128386302-128386731	chr7	+	128386690	128386750	True	NM_001219,NM_001199674,NM_001199671,NM_001199673,NM_001199672,NM_001708,NM_001130674	chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,+,-,+	CALU,CALU,CALU,CALU,CALU,OPN1SW,CALU	-7395,-7395,-7395,-7395,-7395,29144,-7395
chr13:30002627-30002905	chr13	+	30002631	30002941	True	NM_015233,NM_003045	chr13,chr13	+,-	MTUS2,SLC7A1	75,166934
chr14:94539030-94540109	chr14	+	94539361	94539920	True	NM_020414,NM_206949,NM_145249	chr14,chr14,chr14	-,+,+	DDX24,IFI27L1,IFI27L1	7696,7718,7718
chr15:20777178-20777503	chr15	+	20777305	20777479	True	NM_001145004,NR_027411	chr15,chr15	-,+	GOLGA6L6,GOLGA8C	-30191,-9682
chr15:20777178-20777503	chr15	+	28633450	28633624	False	NM_004667,NR_033351,NR_033353	chr15,chr15,chr15	-,+,+	HERC2,GOLGA8F,GOLGA8G	-66155,-9717,-9717
chr15:20777178-20777503	chr15	-	28768303	28768477	False	NR_036443,NR_033351,NR_033353	chr15,chr15,chr15	+,-,-	HERC2P9,GOLGA8F,GOLGA8G	131110,9716,9716
chr15:20777178-20777503	chr15	+	23444703	23444877	False	NR_002824,NR_033350	chr15,chr15	-,+	HERC2P2,GOLGA8E	-66444,-9684
chr15:20777178-20777503	chr15	-	22705711	22706074	False	NR_027407,NM_001001413	chr15,chr15	-,+	GOLGA8DP,GOLGA6L1	9704,30171
chr10:30902147-30903367	chr10	+	30902443	30903195	True	NM_183058,NM_005204	chr10,chr10	-,+	LYZL2,MAP3K8	15502,-179635
chr3:50540017-50540222	chr3	+	50540030	50540240	True	NM_006030,NM_016173,NM_001005505,NM_001174051	chr3,chr3,chr3,chr3	-,+,-,-	CACNA2D2,HEMK1,CACNA2D2,CACNA2D2	702,66668,702,702
chr1:87182450-87183263	chr1	+	87182449	87182879	True	NM_016009,NM_004261	chr1,chr1	+,-	SH3GLB1,SEP15	-12246,197285
chr5:140167843-140168074	chr5	+	140167864	140168094	True	NM_031410,NM_031411,NM_002109,NM_031495,NM_018900,NM_018905	chr5,chr5,chr5,chr5,chr5,chr5	+,+,-,+,+,+	PCDHA1,PCDHA1,HARS,PCDHA2,PCDHA1,PCDHA2	-2039,-2039,-96893,6349,-2039,6349
chr17:17401576-17402203	chr17	+	17401577	17402095	True	NM_016084,NM_018019,NM_001199989	chr17,chr17,chr17	-,+,-	RASD1,MED9,RASD1	-1868,-21328,-1868
chr1:170964475-170965609	chr1	+	170964598	170965590	True	NM_025063,NR_031627	chr1,chr1	+,-	C1orf129,MIR1295	-60014,105413
chr6:119380252-119381917	chr6	+	119380461	119381581	True	NR_030315,NM_014034	chr6,chr6	-,+	MIR548B,ASF1A	8777,-165272
chr19:10398367-10398691	chr19	+	10398367	10398731	True	NM_003259,NM_001544,NM_001039132,NM_022377,NM_001103167	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	ICAM5,ICAM4,ICAM4,ICAM4,ZGLP1	1923,-768,-768,-768,21552
chr22:36551944-36552780	chr22	+	36552197	36552485	True	NM_145641,NM_145640,NM_145642,NM_001136540,NR_027833,NR_027834,NR_027835	chr22,chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,+,-,-,-	APOL3,APOL3,APOL3,APOL1,APOL3,APOL3,APOL3	9790,4542,9790,96631,4542,4542,4542
chr19:51627242-51628060	chr19	+	51627320	51628100	True	NM_145232,NM_001198558,NM_014441	chr19,chr19,chr19	-,+,+	CTU1,SIGLEC9,SIGLEC9	-15673,36,36
chr7:152446061-152446263	chr7	+	152446184	152446310	True	NM_005431,NM_001040135	chr7,chr7	-,+	XRCC2,ACTR3B	-72934,10540
chr12:18857553-18858722	chr12	+	18857633	18858501	True	NM_033328,NM_033123	chr12,chr12	+,-	CAPZA3,PLCZ1	32543,32478
chr4:119758697-119758992	chr4	+	119758698	119758940	True	NM_001128933,NM_014822	chr4,chr4	+,-	SYNPO2,SEC24D	51055,-1372
chr6:123110868-123111306	chr6	+	123110872	123111308	True	NM_006714,NM_020755	chr6,chr6	+,-	SMPDL3A,SERINC1	-953,-317920
chr11:66280297-66281267	chr11	+	66280487	66281229	True	NM_024649,NM_207340	chr11,chr11	+,-	BBS1,ZDHHC24	-2419,32492
chr6:158404109-158405975	chr6	+	158404183	158405966	True	NM_003898,NM_032861	chr6,chr6	+,-	SYNJ2,SERAC1	-1346,183396
chr12:85273263-85274494	chr12	+	85273397	85274543	True	NM_001146335,NM_032165	chr12,chr12	-,+	SLC6A15,LRRIQ1	32113,155555
chr9:131183839-131184701	chr9	+	131184046	131184544	True	NR_029837,NM_016174	chr9,chr9	-,+	MIR219-2,CERCAM	-29053,-1338
chrX:54815418-54815679	chrX	+	54815538	54815708	True	NM_177433,NM_198510	chrX,chrX	+,-	MAGED2,ITIH5L	18462,9015
chrX:54815418-54815679	chrX	-	54850488	54850588	False	NR_002953,NM_198510	chrX,chrX	+,-	SNORA11,ITIH5L	-9736,-25815
chr17:1732184-1732570	chr17	+	1732262	1732570	True	NM_052928,NM_002945	chr17,chr17	-,+	SMYD4,RPA1	655,702
chrX:84258703-84258980	chrX	+	84258725	84259017	True	NM_001012980,NM_198450	chrX,chrX	-,+	SATL1,APOOL	105007,-40
chr10:124745659-124746039	chr10	+	124745804	124746074	True	NM_153336,NM_022466	chr10,chr10	+,-	PSTK,IKZF5	-6309,22287
chr2:25474074-25474346	chr2	+	25474318	25474388	True	NM_153759,NM_014971	chr2,chr2	-,+	DNMT3A,EFR3B	842,-209396
chr8:22023333-22023867	chr8	+	22023350	22023698	True	NM_139278,NM_001199,NM_001172357,NR_033403,NR_033404,NM_001172410,NM_006129,NM_003018	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,+,+,+,+,+,+,+	LGI3,BMP1,SFTPC,BMP1,BMP1,SFTPC,BMP1,SFTPC	-9006,-748,-4217,-748,-748,-4217,-748,-4217
chr21:32252299-32253537	chr21	+	32252498	32253393	True	NM_175858,NM_001128077	chr21,chr21	-,+	KRTAP11-1,KRTAP20-3	531,-237366
chr6:42712030-42712450	chr6	+	42712055	42712317	True	NM_003192,NR_037141	chr6,chr6	-,+	TBCC,LOC442211	1625,-16798
chr5:98104003-98104584	chr5	+	98104103	98104577	True	NM_001012761,NR_033932	chr5,chr5	+,-	RGMB,FLJ35946	421,4261
chr7:150785306-150785719	chr7	+	150785340	150785682	True	NM_031434,NM_031946,NM_001042535,NM_001136044,NM_033015,NM_006712	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,-,-,-	TMUB1,AGAP3,AGAP3,TMUB1,FASTK,FASTK	-4927,-1565,-1565,-4720,-7389,-7389
chr10:98271532-98272220	chr10	+	98271707	98272183	True	NM_004088,NM_012465	chr10,chr10	+,-	DNTT,TLL2	-207673,1550
chr1:87801249-87802601	chr1	+	87801346	87802568	True	NM_006769,NM_203341	chr1,chr1	+,-	LMO4,SEP15	-7246,-421239
chr16:81349489-81350622	chr16	+	81349494	81350374	True	NM_001076780,NM_022041	chr16,chr16	-,+	PKD1L2,GAN	-95519,-974
chr11:123396799-123397703	chr11	+	123396813	123397654	True	NM_020716,NM_001040151	chr11,chr11	+,-	GRAMD1B,SCN3B	-336,127711
chr19:29403338-29404058	chr19	+	29403379	29404075	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	51962,300111
chr20:62886047-62886662	chr20	+	62886088	62886678	True	NM_001104925,NM_005286	chr20,chr20	+,-	PCMTD2,NPBWR2	369,-147904
chr11:77730352-77730749	chr11	+	77730700	77730789	True	NM_023930,NM_003251	chr11,chr11	-,+	KCTD14,THRSP	3588,44117
chr19:5851654-5852583	chr19	+	5851695	5852553	True	NM_001097641,NM_001097640,NM_004558,NM_001097639,NM_000149	chr19,chr19,chr19,chr19,chr19	-,-,+,-,-	FUT3,FUT3,NRTN,FUT3,FUT3	-210,-210,-27928,-210,-210
chr19:44489510-44489985	chr19	+	44489518	44490034	True	NM_003445,NM_198089,NM_003425	chr19,chr19,chr19	+,+,-	ZNF155,ZNF155,ZNF45	-1217,-1217,-50107
chr7:94549699-94549961	chr7	+	94549707	94549965	True	NM_001166163,NM_003919	chr7,chr7	+,-	PPP1R9A,SGCE	-10561,-264186
chr11:65337462-65337694	chr11	+	65337465	65337729	True	NM_001099409,NM_006396,NM_152832,NM_021070,NM_001098785,NM_001098784	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,-,+,+	EHBP1L1,SSSCA1,FAM89B,LTBP3,FAM89B,FAM89B	5779,213,2090,-11766,2090,2090
chr9:35910367-35910945	chr9	+	35910407	35910981	True	NR_024283,NM_001004487,NM_001039792	chr9,chr9,chr9	+,-,+	LOC158376,OR13J1,HRCT1	-978,-40009,-4269
chr20:43974317-43976057	chr20	+	43974618	43975866	True	NM_002999,NM_001197129	chr20,chr20	-,+	SDC4,SYS1	1248,14710
chr11:69060674-69061861	chr11	+	69060842	69061652	True	NM_145015,NM_138768	chr11,chr11	-,+	MRGPRF,MYEOV	-279992,-31
chr16:30041189-30041527	chr16	+	30041201	30041555	True	NM_031478,NM_001109660,NM_001109659	chr16,chr16,chr16	-,+,+	FAM57B,C16orf92,C16orf92	681,-6597,-6597
chr19:34014237-34014840	chr19	+	34014460	34014784	True	NM_001166057,NM_000285,NM_001166056,NM_001127895	chr19,chr19,chr19,chr19	-,-,-,+	PEPD,PEPD,PEPD,CHST8	-1661,-1661,-1661,98076
chrX:46616890-46617355	chrX	+	46616894	46617380	True	NM_032591,NM_006915	chrX,chrX	-,+	SLC9A7,RP2	1142,78966
chr19:54606374-54606950	chr19	+	54606435	54606961	True	NM_133169,NM_130771,NM_206818,NM_004542,NM_133168	chr19,chr19,chr19,chr19,chr19	-,-,-,+,-	OSCAR,OSCAR,OSCAR,NDUFA3,OSCAR	-2287,-2287,-2287,-326,-2287
chr6:28481285-28482401	chr6	+	28481446	28482416	True	NM_182701,NM_001509	chr6,chr6	-,+	GPX6,GPX5	1204,11372
chr6:28481285-28482401	chr6_cox_hap2	+	3650	4620	False	NM_001509,NM_052923	chr6_cox_hap2,chr6_cox_hap2	+,-	GPX5,SCAND3	11372,72746
chrX:11782355-11783071	chrX	+	11782395	11782827	True	NM_078628,NM_006800,NM_001193270,NM_006125,NM_078629	chrX,chrX,chrX,chrX,chrX	+,+,+,-,+	MSL3,MSL3,MSL3,ARHGAP6,MSL3	-6168,-4711,-5737,-98574,-6168
chr17:73260851-73261548	chr17	+	73261042	73261584	True	NM_015971,NR_036520,NM_001172703,NM_001172704,NM_138619,NM_020679,NR_033345,NM_014001	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,-,-,-,-,-,-	MRPS7,LOC100287042,GGA3,GGA3,GGA3,MIF4GD,GGA3,GGA3	-3346,5795,-2598,-2598,-3335,5769,-3335,-3335
chr10:43918490-43919146	chr10	+	43918844	43919155	True	NR_026693,NM_001098204	chr10,chr10	+,-	ZNF487P,HNRNPF	13418,-14148
chrY:15555114-15555419	chrY	+	15555128	15555442	True	NM_007125,NM_004202	chrY,chrY	-,+	UTY,TMSB4Y	37158,260004
chr6:166077727-166077957	chr6	+	166077730	166078000	True	NM_001130690,NM_006661,NR_027284	chr6,chr6,chr6	-,-,+	PDE10A,PDE10A,LOC441177	-2146,-2146,323038
chr17:10601288-10603142	chr17	+	10601390	10602749	True	NM_004589,NM_020233	chr17,chr17	-,+	SCO1,C17orf48	-505,-515
chr5:138630152-138630413	chr5	+	138630228	138630436	True	NM_005847,NM_018834,NM_001194956,NM_001194955	chr5,chr5,chr5,chr5	-,+,+,+	SLC23A1,MATR3,MATR3,MATR3	88653,-948,-842,-842
chr12:29588580-29589588	chr12	+	29588589	29589186	True	NM_018099,NM_016570	chr12,chr12	+,-	FAR2,ERGIC2	-212044,-54446
chr1:33780699-33781903	chr1	+	33781167	33781842	True	NR_037400,NM_152493	chr1,chr1	-,+	MIR3605,ZNF362	16302,-59045
chr12:53625078-53625388	chr12	+	53625091	53625331	True	NM_000966,NM_001170790	chr12,chr12	-,+	RARG,MFSD5	755,20038
chr2:198516265-198516827	chr2	+	198516549	198516871	True	NM_144629,NM_138395	chr2,chr2	-,+	RFTN2,MARS2	23763,53156
chr14:23772099-23772388	chr14	+	23772112	23772426	True	NM_001199864,NM_001199839,NM_004050,NR_026862	chr14,chr14,chr14,chr14	+,+,+,-	BCL2L2-PABPN1,BCL2L2,BCL2L2,PPP1R3E	3544,3642,3544,-55
chr2:219906651-219907137	chr2	+	219906730	219907152	True	NM_194302,NM_152389,NR_024385	chr2,chr2,chr2	-,-,+	CCDC108,CCDC108,LOC151300	-485,-485,-65783
chr1:810404-811069	chr1	+	810404	811088	True	NR_027055,NR_015368	chr1,chr1	-,+	FAM41C,LOC643837	1144,-47391
chr1:162080258-162081627	chr1	+	162080393	162081587	True	NM_014697,NM_015441	chr1,chr1	+,-	NOS1AP,OLFML2B	-40864,-86749
chr9:132584983-132585432	chr9	+	132585004	132585356	True	NM_001110303,NM_000113	chr9,chr9	+,-	USP20,TOR1A	12339,1135
chr2:105945840-105946080	chr2	+	105945851	105946111	True	NM_001142621,NM_004257,NM_024093	chr2,chr2,chr2	-,-,+	TGFBRAP1,TGFBRAP1,C2orf49	87,87,7901
chr7:557756-557958	chr7	+	557763	557839	True	NM_033023,NM_002607,NR_033963	chr7,chr7,chr7	-,-,+	PDGFA,PDGFA,FLJ44511	1692,1692,2188
chr9:21973525-21973980	chr9	+	21973524	21973814	True	NR_024274,NM_001195132,NM_000077,NM_058197	chr9,chr9,chr9,chr9	+,-,-,-	C9orf53,CDKN2A,CDKN2A,CDKN2A	-6442,1382,1382,1076
chr19:45411054-45411586	chr19	+	45411084	45411468	True	NM_145288,NM_001645,NM_000041	chr19,chr19,chr19	-,+,+	ZNF296,APOC1,APOE	168270,6452,-2096
chr15:35279139-35279914	chr15	+	35279194	35279802	True	NM_014106,NR_003144	chr15,chr15	-,+	ZNF770,LOC723972	754,249724
chr20:44748801-44749419	chr20	+	44748887	44749404	True	NM_152854,NM_001250,NM_020967	chr20,chr20,chr20	+,+,-	CD40,CD40,NCOA5	-2039,-2039,-30307
chr1:93249954-93250351	chr1	+	93250108	93250358	True	NM_005665,NM_000969	chr1,chr1	-,+	EVI5,RPL5	7653,47235
chr7:127224552-127224872	chr7	+	127224615	127224859	True	NM_024523,NM_020369,NM_001662	chr7,chr7,chr7	-,+,+	GCC1,FSCN3,ARF5	845,8829,3546
chr12:56850344-56851423	chr12	+	56850776	56851223	True	NM_003920,NM_012064,NM_207344	chr12,chr12,chr12	-,-,+	TIMELESS,MIP,SPRYD4	-7576,-2341,11077
chr3:49969972-49970789	chr3	+	49970498	49970664	True	NM_001167582,NM_005777,NM_032355,NM_001142501	chr3,chr3,chr3,chr3	+,+,-,-	RBM6,RBM6,MON1A,MON1A	6812,6812,-3053,-3053
chr1:156251776-156252052	chr1	+	156251790	156252014	True	NR_026678,NM_015327,NM_032323	chr1,chr1,chr1	+,-,+	TMEM79,SMG5,TMEM79	689,656,2055
chr1:247083299-247083793	chr1	+	247083478	247083758	True	NR_015422,NM_015446	chr1,chr1	+,-	LOC149134,AHCTF1	-130617,11032
chr1:204041350-204041620	chr1	+	204041350	204041534	True	NM_005686,NR_027902	chr1,chr1	+,-	SOX13,C1orf157	711,-30958
chr9:21976434-21977455	chr9	+	21976745	21977236	True	NR_024274,NM_001195132,NM_000077,NM_058197	chr9,chr9,chr9,chr9	+,-,-,-	C9orf53,CDKN2A,CDKN2A,CDKN2A	-9658,-1613,-1613,-1919
chr19:7853581-7853936	chr19	+	7853756	7853984	True	NR_026692,NR_002931	chr19,chr19	-,+	CD209,CLEC4GP1	-41292,-1437
chr22:50640912-50642682	chr22	+	50641187	50642545	True	NM_031454,NM_020461	chr22,chr22	+,-	SELO,TUBGCP6	-1830,40917
chr16:31121666-31121887	chr16	+	31121698	31121788	True	NM_001122957,NM_032188,NM_182958,NM_206824,NM_005881	chr16,chr16,chr16,chr16,chr16	+,+,+,-,+	BCKDK,MYST1,MYST1,VKORC1,BCKDK	-2087,7196,7196,-15422,-2087
chr16:4553109-4554520	chr16	+	4553158	4554328	True	NM_020677,NM_001127205	chr16,chr16	-,+	NMRAL1,HMOX2	-28262,-7350
chr12:21680057-21680258	chr12	+	21680063	21680273	True	NM_030572,NM_032941	chr12,chr12	+,-	C12orf39,RECQL	-858,-25460
chr4:76557867-76559649	chr4	+	76558229	76559577	True	NM_003948,NM_178497	chr4,chr4	-,+	CDKL2,C4orf26	-2508,-77022
chr3:118843204-118844069	chr3	+	118843543	118844035	True	NM_152539,NM_152538	chr3,chr3	+,-	C3orf30,IGSF11	20961,20919
chr2:201937646-201938345	chr2	+	201937651	201938192	True	NM_002491,NM_173822	chr2,chr2	+,-	NDUFB3,FAM126B	-1247,-1259
chr1:228298028-228299561	chr1	+	228298084	228298516	True	NM_181456,NM_181454,NM_181455,NM_181441,NR_037415,NM_181465,NM_181464,NM_024319,NM_181463,NM_181462	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,+,-,-,-,-,-	MRPL55,MRPL55,MRPL55,MRPL55,MIR3620,MRPL55,MRPL55,C1orf35,MRPL55,MRPL55	-1071,-1071,-1071,-1071,-13171,-1071,-1071,-7062,-1071,-1071
chr4:46909980-46910778	chr4	+	46910235	46910734	True	NM_130902,NM_000812	chr4,chr4	-,+	COX7B2,GABRB1	569,122560
chr10:99607789-99608355	chr10	+	99607789	99608094	True	NM_003015,NM_001010917	chr10,chr10	-,+	SFRP5,GOLGA7B	-76033,1901
chr20:8113439-8113955	chr20	+	8113564	8113946	True	NM_015192,NM_182734,NM_021156	chr20,chr20,chr20	+,+,-	PLCB1,PLCB1,TMX4	-319,-319,-113171
chr9:31889094-31889493	chr9	+	31889464	31889536	True	NM_014314,NM_002197	chr9,chr9	-,+	DDX58,ACO1	636840,495064
chr16:15597448-15598575	chr16	+	15597491	15598027	True	NM_001184998,NM_001142469	chr16,chr16	-,+	KIAA0430,C16orf45	139046,-1419
chrX:52260173-52260455	chrX	+	52260252	52260464	True	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,-,-,-,-,-,-,-,-,-,-	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	-42,-98,-98,-37,-98,-98,-98,-42,-37,-42,-37,-37,-37,-42,-42
chrX:52260173-52260455	chrX	-	52238708	52238920	False	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,+,+,+,+,+,+,+,+,+,+	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	42,98,98,37,98,98,98,42,37,42,37,37,37,42,42
chrX:52260173-52260455	chrX	-	52511659	52511871	False	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,+,+,+,+,+,+,+,+,+,+	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	42,98,98,37,98,98,98,42,37,42,37,37,37,42,42
chrX:52260173-52260455	chrX	+	52533192	52533404	False	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,-,-,-,-,-,-,-,-,-,-	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	-42,-98,-98,-37,-98,-98,-98,-42,-37,-42,-37,-37,-37,-42,-42
chrX:52260173-52260455	chrX	+	52546086	52546298	False	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,-,-,-,-,-,-,-,-,-,-	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	-42,-98,-98,-37,-98,-98,-98,-42,-37,-42,-37,-37,-37,-42,-42
chr20:33880713-33880928	chr20	+	33880728	33880900	True	NM_006690,NM_002212,NM_181466,NM_178468,NM_181468	chr20,chr20,chr20,chr20,chr20	+,-,-,-,-	MMP24,EIF6,EIF6,FAM83C,EIF6	-66240,-8134,-8134,-503,-8222
chr19:38146486-38146717	chr19	+	38146702	38146764	True	NM_001172226,NM_014898	chr19,chr19	+,-	ZNF540,ZFP30	-61022,-389
chr10:45985770-45986840	chr10	+	45985775	45986750	True	NM_001002266,NM_000698	chr10,chr10	-,+	MARCH8,ALOX5	44123,-116198
chr10:73080017-73080667	chr10	+	73080086	73080652	True	NM_001174098,NM_018344,NR_033414,NR_033413,NM_001164375	chr10,chr10,chr10,chr10,chr10	+,+,+,+,-	SLC29A3,SLC29A3,SLC29A3,SLC29A3,C10orf105	-1138,-1138,-1138,-1138,398976
chr20:38526447-38527105	chr20	+	38526522	38527155	True	NR_033905,NR_027124	chr20,chr20	+,-	DHX35,LOC339568	-935593,-673131
chr1:17447886-17448476	chr1	+	17448024	17448383	True	NM_007365,NM_013358	chr1,chr1	-,+	PADI2,PADI1	-2076,83237
chr8:145134872-145135211	chr8	+	145134876	145135234	True	NM_003801,NM_017570,NM_019037	chr8,chr8,chr8	+,-,+	GPAA1,OPLAH,EXOSC4	2289,-19292,-1405
chrY:14468696-14469526	chrY	+	14469017	14469565	True	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	304732,63874
chr6:96488420-96488952	chr6	+	96488425	96488689	True	NM_001143957,NM_006581	chr6,chr6	-,+	GPR63,FUT9	796716,-24637
chr17:10424629-10426169	chr17	+	10424698	10426189	True	NM_005963,NM_020233	chr17,chr17	-,+	MYH1,C17orf48	-2839,174737
chr1:223308297-223309097	chr1	+	223308297	223309130	True	NM_003268,NM_152610	chr1,chr1	-,+	TLR5,C1orf65	7555,257584
chr8:74660191-74660425	chr8	+	74660192	74660459	True	NM_001164381,NM_001164380,NM_001164383,NM_001164382,NM_001164385,NM_001164384,NM_001040613,NM_014393	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,-,-,+,-	STAU2,STAU2,STAU2,STAU2,STAU2,STAU2,TMEM70,STAU2	-1030,-1030,-1030,-1030,-1030,-249,227917,-1030
chr19:498822-499078	chr19	+	498825	499003	True	NM_033513,NM_130762,NM_182577,NM_130760	chr19,chr19,chr19,chr19	+,+,-,+	C19orf20,MADCAM1,ODF3L2,MADCAM1	8493,-2386,-23842,-2386
chr21:18985666-18985880	chr21	+	18985715	18985929	True	NM_001130914,NM_001338,NM_006806	chr21,chr21,chr21	-,+,-	BTG3,CXADR,BTG3	-447,-100438,-447
chr22:46482242-46482952	chr22	+	46482555	46482951	True	NR_037413,NM_018280,NR_027033	chr22,chr22,chr22	+,-,+	MIR3619,C22orf26,LOC400931	3972,-32531,-730
chr1:50539931-50540191	chr1	+	50539953	50540225	True	NM_032785,NM_001144777	chr1,chr1	-,+	AGBL4,ELAVL4	-50327,-26330
chr17:7746222-7746538	chr17	+	7746243	7746517	True	NM_032356,NM_001080424	chr17,chr17	-,+	LSMD1,KDM6B	14705,-3059
chr5:77944341-77944569	chr5	+	77944365	77944585	True	NM_004866,NM_005779	chr5,chr5	+,-	SCAMP1,LHFPL2	-288077,113
chr2:172309054-172310953	chr2	+	172309251	172310763	True	NR_028482,NM_024770	chr2,chr2	+,-	DCAF17,METTL8	-18541,-17939
chr12:123701292-123701790	chr12	+	123701632	123701723	True	NM_022782,NM_152269	chr12,chr12	-,+	MPHOSPH9,C12orf65	4779,16120
chr10:5934643-5934988	chr10	+	5934704	5934975	True	NM_019046,NM_001009941,NM_032807,NM_001009943,NM_178150	chr10,chr10,chr10,chr10,chr10	-,-,+,-,+	ANKRD16,ANKRD16,FBXO18,ANKRD16,FBXO18	-2844,-2844,1373,-2844,-2553
chr1:112298216-112298435	chr1	+	112298296	112298484	True	NM_198926,NM_007204	chr1,chr1	-,+	C1orf183,DDX20	-3,-157
chr5:6313875-6315872	chr5	+	6314161	6315705	True	NM_001145161,NR_028351	chr5,chr5	+,-	UBE2QL1,FLJ33360	133030,21750
chr8:67053019-67053604	chr8	+	67053130	67053604	True	NM_000756,NM_184087	chr8,chr8	-,+	CRH,TRIM55	37292,-13904
chr1:160607284-160608634	chr1	+	160607336	160608650	True	NM_021181,NM_003037	chr1,chr1	+,-	SLAMF7,SLAMF1	100426,8481
chr7:47696554-47697155	chr7	+	47696695	47697119	True	NM_022748,NM_001123065	chr7,chr7	-,+	TNS3,C7orf65	-74953,-1906
chr19:36484415-36484884	chr19	+	36484419	36484925	True	NM_001039876,NM_001042631	chr19,chr19	-,+	C19orf46,SDHAF1	14797,1164
chr4:144435340-144435544	chr4	+	144435358	144435544	True	NM_001168235,NM_003601	chr4,chr4	-,+	FREM3,SMARCA5	186334,-793
chr13:69557252-69558753	chr13	+	69557264	69558769	True	NR_002717,NM_020866	chr13,chr13	+,-	ATXN8OS,KLHL1	1122575,1123907
chr19:14119322-14119615	chr19	+	14119421	14119609	True	NM_002918,NM_080864	chr19,chr19	-,+	RFX1,RLN3	-2287,19407
chr2:182932700-182933358	chr2	+	182932764	182933404	True	NM_002500,NM_001080545	chr2,chr2	-,+	NEUROD1,PPP1R1C	-387372,-82274
chr22:20862145-20862367	chr22	+	20862237	20862321	True	NM_001003891,NR_033825,NM_015889	chr22,chr22,chr22	+,-,+	MED15,KLHL22,MED15	-402,-12067,-402
chr19:53873270-53874083	chr19	+	53873270	53874010	True	NM_033341,NR_003699	chr19,chr19	-,+	BIRC8,ZNF525	-78395,-4359
chr19:53873270-53874083	chr19	+	53948704	53948754	False	NR_003148,NM_033341	chr19,chr19	+,-	LOC147804,BIRC8	-13514,-153829
chr7:115891307-115891591	chr7	+	115891306	115891465	True	NM_152829,NM_012252	chr7,chr7	+,-	TES,TFEC	-28362,-220508
chr3:10321571-10323171	chr3	+	10321656	10322927	True	NM_001134941,NR_026829,NR_004431,NM_016362,NR_024145,NR_024144,NR_024146	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,+,-,+,+,+	GHRL,C3orf42,GHRLOS,GHRL,GHRLOS,GHRLOS,GHRLOS	9543,3175,4510,9543,4510,4510,4510
chr9:139946835-139947516	chr9	+	139946841	139947561	True	NM_207309,NM_207511,NM_001246,NM_203468,NM_015392	chr9,chr9,chr9,chr9,chr9	+,+,-,-,-	UAP1L1,C9orf139,ENTPD2,ENTPD2,NPDC1	24391,-24976,994,994,-6165
chr19:12943217-12943451	chr19	+	12943234	12943498	True	NM_001080997,NM_014975,NM_031429	chr19,chr19,chr19	-,+,-	RTBDN,MAST1,RTBDN	-2027,5760,2782
chr5:125930431-125930642	chr5	+	125930475	125930610	True	NM_001201377,NM_032177,NM_001202404,NM_001182	chr5,chr5,chr5,chr5	-,+,-,-	ALDH7A1,PHAX,ALDH7A1,ALDH7A1	522,5996,522,522
chr15:40630369-40631713	chr15	+	40630535	40631749	True	NM_001145643,NM_207380	chr15,chr15	+,-	PHGR1,C15orf52	11484,1469
chr10:95240391-95241890	chr10	+	95240608	95241928	True	NM_001127182,NM_013451,NM_133337	chr10,chr10,chr10	+,-,-	CEP55,MYOF,MYOF	14440,197,197
chr1:228351420-228352574	chr1	+	228351461	228352567	True	NM_181465,NM_001010867	chr1,chr1	-,+	MRPL55,IBA57	-54448,861
chr2:148599911-148601712	chr2	+	148599992	148601339	True	NM_001190882,NM_001616	chr2,chr2	-,+	ORC4,ACVR2A	177017,1230
chr2:40632930-40634358	chr2	+	40632934	40634152	True	NM_001112800,NM_152390	chr2,chr2	-,+	SLC8A1,TMEM178	23342,-739964
chrX:16803878-16804489	chrX	+	16803895	16804325	True	NM_019857,NM_001168683,NM_018360	chrX,chrX,chrX	-,+,+	CTPS2,TXLNG,TXLNG	-72836,229,229
chr21:35744691-35746069	chr21	+	35744751	35746070	True	NM_001127670,NM_058182,NM_172201	chr21,chr21,chr21	-,+,+	KCNE1,FAM165B,KCNE2	82044,1678,-8486
chr10:89115925-89116824	chr10	+	89116094	89116821	True	NM_001009610,NR_024397	chr10,chr10	+,-	FAM22D,LOC728190	655,-13779
chr10:89115925-89116824	chr10	+	88983875	88984601	False	NM_001099338,NR_024397	chr10,chr10	+,-	FAM22A,LOC728190	603,117825
chr10:89115925-89116824	chr10	+	81600220	81600510	False	NR_029407,NM_003019	chr10,chr10	+,-	LOC642361,SFTPD	-14614,108632
chr10:89115925-89116824	chr10	+	81461657	81462379	False	NR_027512,NM_001098668	chr10,chr10	+,-	LOC650623,SFTPA2	-18984,-141494
chr11:45908072-45908330	chr11	+	45908074	45908358	True	NM_005456,NM_001080446	chr11,chr11	+,-	MAPK8IP1,C11orf94	-923,20525
chr22:50924683-50924966	chr22	+	50924774	50924906	True	NM_024866,NM_017584,NM_002972	chr22,chr22,chr22	+,+,-	ADM2,MIOX,SBF1	-4813,306,-11310
chr1:206682323-206683223	chr1	+	206682326	206683206	True	NM_182664,NM_001201478,NM_182663	chr1,chr1,chr1	+,-,+	RASSF5,EIF2D,RASSF5	-1498,102755,-1498
chr17:40832574-40833124	chr17	+	40832640	40832952	True	NM_016602,NM_024927,NM_003632	chr17,chr17,chr17	-,-,+	CCR10,PLEKHH3,CNTNAP1	943,-3592,1679
chr17:45812352-45814302	chr17	+	45812702	45814319	True	NM_145798,NM_013351	chr17,chr17	-,+	OSBPL7,TBX21	84878,-2150
chr15:98403926-98405541	chr15	+	98404069	98405558	True	NM_183376,NR_024172	chr15,chr15	+,-	ARRDC4,LOC91948	98374,12151
chr14:36260666-36261843	chr14	+	36261229	36261706	True	NM_014990,NM_032352	chr14,chr14	-,+	RALGAPA1,BRMS1L	16777,33890
chr4:10034611-10034904	chr4	+	10034681	10034889	True	NM_000798,NM_001001290	chr4,chr4	+,-	DRD5,SLC2A9	-251474,7033
chr12:4430876-4431252	chr12	+	4430994	4431153	True	NM_020638,NM_020375	chr12,chr12	-,+	FGF23,C12orf5	57798,-698
chr19:42304813-42305178	chr19	+	42304838	42305168	True	NM_173506,NM_001815	chr19,chr19	-,+	LYPD4,CEACAM3	43390,-4356
chr1:75596944-75597357	chr1	+	75596955	75597293	True	NM_001001933,NM_001889	chr1,chr1	+,-	LHX8,CRYZ	-2887,-397863
chr15:41062908-41063242	chr15	+	41062997	41063223	True	NM_018145,NM_001130448,NM_005258	chr15,chr15,chr15	-,+,+	FAM82A2,C15orf62,GCHFR	-15539,-889,-6763
chr2:220028513-220029957	chr2	+	220028773	220029826	True	NM_024782,NM_001144889,NM_024293,NM_001144890,NM_144712	chr2,chr2,chr2,chr2,chr2	-,-,+,-,-	NHEJ1,SLC23A3,FAM134A,SLC23A3,SLC23A3	-3186,5041,13112,5041,5041
chr2:27356869-27357089	chr2	+	27356897	27357009	True	NM_032604,NM_178553,NM_013388	chr2,chr2,chr2	+,-,-	ABHD1,C2orf53,PREB	-10291,5373,583
chr14:96828626-96828951	chr14	+	96828641	96828974	True	NM_018036,NM_016472	chr14,chr14	-,+	ATG2B,C14orf129	761,17047
chr22:20193173-20193395	chr22	+	20193175	20193441	True	NR_026919,NR_031618	chr22,chr22	+,-	LOC150197,MIR1286	413,43343
chr7:74266117-74266363	chr7	+	74266124	74266374	True	NM_173537,NR_027775	chr7,chr7	-,+	GTF2IRD2,PMS2P5	1517,40519
chr7:74266117-74266363	chr7	-	74509877	74510127	False	NM_030798,NM_001003795	chr7,chr7	-,+	WBSCR16,GTF2IRD2B	-20178,-1581
chr7:107225914-107226154	chr7	+	107225914	107226160	True	NR_027830,NM_001161520,NM_001008405,NM_018844	chr7,chr7,chr7,chr7	+,-,+,+	BCAP29,COG5,BCAP29,BCAP29	-5543,-20955,-4761,-5543
chr16:77759468-77760907	chr16	+	77759516	77760300	True	NR_024154,NM_001105663,NM_199355	chr16,chr16,chr16	+,+,-	NUDT7,NUDT7,ADAMTS18	-3156,-3156,-290505
chr10:135159654-135160617	chr10	+	135159990	135160666	True	NM_001145201,NM_015722,NM_145202	chr10,chr10,chr10	+,-,+	PRAP1,CALY,PRAP1	177,-9515,177
chr8:56689209-56690257	chr8	+	56689302	56690078	True	NM_152417,NM_024831	chr8,chr8	-,+	TMEM68,TGS1	-3417,-3569
chrX:19361770-19362003	chrX	+	19361774	19362052	True	NM_001173455,NM_001173454,NM_001173456,NM_000284,NM_001001671	chrX,chrX,chrX,chrX,chrX	+,+,+,+,-	PDHA1,PDHA1,PDHA1,PDHA1,MAP3K15	-24,-24,-24,-24,171377
chr5:133451257-133451610	chr5	+	133451322	133451564	True	NM_001134851,NR_033449,NM_003202,NM_213648,NM_006930,NM_201632,NM_201634	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,-,+,+	TCF7,TCF7,TCF7,TCF7,SKP1,TCF7,TCF7	-75,-23,-971,-75,61210,-75,-75
chr9:41026715-41027875	chr9	+	41027116	41027170	True	NR_026801,NM_033160	chr9,chr9	+,-	FAM74A3,ZNF658	-311647,-235004
chr9:41026715-41027875	chr9	+	44557274	44557328	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	432907,-926544
chr2:32293340-32293817	chr2	+	32293682	32293777	True	NM_199436,NM_032574,NM_014946	chr2,chr2,chr2	+,-,+	SPAST,DPY30,SPAST	-5054,-28838,-5054
chrX:47962451-47962773	chrX	+	47962545	47962792	True	NM_001205103,NR_028366,NR_033730	chrX,chrX,chrX	+,+,-	LOC100509575,SSX6,ZNF630	4584,4574,-31520
chr19:37343080-37343431	chr19	+	37343114	37343189	True	NM_003419,NM_206894	chr19,chr19	+,-	ZNF345,ZNF790	-1911,-13830
chr4:6273574-6274525	chr4	+	6273875	6274571	True	NM_006005,NM_144720,NM_001145853	chr4,chr4,chr4	+,-,+	WFS1,JAKMIP1,WFS1	-2349,-71557,-2349
chr7:47577828-47578689	chr7	+	47578056	47578595	True	NM_001123065,NM_022748	chr7,chr7	+,-	C7orf65,TNS3	116246,43198
chr9:69135314-69136550	chr9	+	69135546	69136479	True	NR_002836,NM_001098805	chr9,chr9	-,+	PGM5P2,ANKRD20A4	11432,245501
chr9:69135314-69136550	chr9	+	68797710	68797760	False	NR_033907,NR_034006	chr9,chr9	-,+	LOC642236,LOC100132352	-343335,-71220
chr9:69135314-69136550	chr9	-	70983407	70983465	False	NR_015423,NM_021965	chr9,chr9	-,+	LOC572558,PGM5	-10650,-11651
chr1:54300635-54301941	chr1	+	54300797	54301935	True	NM_000792,NR_033142,NM_001168551,NM_018087	chr1,chr1,chr1,chr1	+,-,-,-	DIO1,TMEM48,TMEM48,TMEM48	57925,2340,2340,2340
chr3:108895753-108897003	chr3	+	108895787	108896961	True	NR_026767,NM_014429	chr3,chr3	+,-	C3orf66,MORC1	50,-58794
chr11:124618538-124618791	chr11	+	124618666	124618835	True	NM_001126181,NM_006176,NM_014312	chr11,chr11,chr11	+,+,-	NRGN,NRGN,VSIG2	-8888,-8888,3324
chr1:18807527-18808016	chr1	+	18807532	18808054	True	NM_152375,NM_152232	chr1,chr1	+,-	KLHDC7A,TAS1R2	-159,378151
chr19:10677375-10677914	chr19	+	10677386	10677906	True	NM_023008,NM_079421,NR_031603,NM_001800	chr19,chr19,chr19,chr19	-,-,+,-	KRI1,CDKN2D,MIR1238,CDKN2D	-684,1799,-14639,1775
chr17:79623753-79624765	chr17	+	79624113	79624593	True	NM_002602,NM_199287,NM_001039842,NR_026872	chr17,chr17,chr17,chr17	-,+,-,-	PDE6G,CCDC137,C17orf90,PDE6G	-506,9167,9075,-506
chr11:89658862-89659755	chr11	+	89658864	89659717	True	NM_001105522	chr11	+	TRIM49L1	-1683
chr11:89658862-89659755	chr11	-	89651090	89651943	False	NM_001105522	chr11	-	TRIM49L1	1683
chr19:58099704-58100679	chr19	+	58099745	58100721	True	NM_001010879,NM_017879	chr19,chr19	+,-	ZIK1,ZNF416	-4168,-9502
chr20:25775980-25776266	chr20	+	25775992	25776276	True	NR_004846,NR_027061,NR_026714	chr20,chr20,chr20	+,-,-	LOC100134868,FAM182B,FAM182B	214158,652,5701
chr20:25775980-25776266	chr20	-	26040900	26041184	False	NR_003678,NR_026713	chr20,chr20	-,+	C20orf191,FAM182A	53543,-5701
chr10:128081031-128081419	chr10	+	128081052	128081426	True	NM_021641,NM_145235,NM_003474	chr10,chr10,chr10	-,+,-	ADAM12,FANK1,ADAM12	-3925,-495997,-3925
chr11:1074867-1075112	chr11	+	1074905	1075131	True	NM_002457,NM_005961	chr11,chr11	+,-	MUC2,MUC6	-81,-38199
chr1:240762827-240763157	chr1	+	240762833	240763200	True	NM_022469,NM_020066	chr1,chr1	-,+	GREM2,FMN2	12313,-507706
chr2:113012735-113012951	chr2	+	113012775	113012838	True	NM_032494,NM_198581	chr2,chr2	-,+	ZC3H8,ZC3H6	-111,20339
chr5:132203283-132204916	chr5	+	132203399	132204770	True	NM_014402,NM_052971,NM_005260	chr5,chr5,chr5	+,+,-	UQCRQ,LEAP2,GDF9	-1131,4587,-2922
chr19:1243172-1243427	chr19	+	1243175	1243239	True	NM_001001975,NM_177401,NM_001687,NM_152769	chr19,chr19,chr19,chr19	+,+,+,-	ATP5D,MIDN,ATP5D,C19orf26	-1477,5312,-1477,-5185
chr5:134871885-134872637	chr5	+	134872039	134872681	True	NM_145282,NM_006161	chr5,chr5	+,-	SLC25A48,NEUROG1	297683,-400
chr11:63869158-63870016	chr11	+	63869247	63870015	True	NM_013280,NM_014067	chr11,chr11	+,-	FLRT1,MACROD1	1346,63620
chr11:77347406-77348199	chr11	+	77347412	77348173	True	NM_173039,NM_001293	chr11,chr11	+,-	AQP11,CLNS1A	-46786,728
chrX:71791067-71791506	chrX	+	71791121	71791350	True	NM_018486,NM_001080851,NM_001166448,NM_001166419,NM_001166418,NM_001166422,NM_001166420	chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,+,-,-,-,-,-	HDAC8,DMRTC1B,HDAC8,HDAC8,HDAC8,HDAC8,HDAC8	1660,273525,1660,1660,1660,1660,1660
chr21:47401433-47401830	chr21	+	47401648	47401840	True	NM_001848,NM_006657	chr21,chr21	+,-	COL6A1,FTCD	-36,173691
chr17:46680459-46681305	chr17	+	46680465	46681089	True	NM_004502,NM_018952,NR_033205,NM_002147	chr17,chr17,chr17,chr17	-,-,+,-	HOXB7,HOXB6,LOC404266,HOXB5	7345,1296,-7196,-9362
chr1:29212921-29213227	chr1	+	29212986	29213262	True	NM_004437,NM_203343,NM_203342,NM_001171868,NM_001166005,NM_001166007	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,-,+,+	EPB41,EPB41,EPB41,TMEM200B,EPB41,EPB41	340,340,340,235801,340,340
chr19:8577057-8577788	chr19	+	8577251	8577829	True	NM_032152,NM_001146175,NM_032370,NM_031203	chr19,chr19,chr19,chr19	-,-,-,+	PRAM1,ZNF414,ZNF414,HNRNPM	-9713,1269,1269,-67499
chr11:6638916-6639324	chr11	+	6638973	6639271	True	NM_001014795,NM_000391,NM_006284	chr11,chr11,chr11	+,-,-	ILK,TPP1,TAF10	-13817,1471,-5528
chr4:1973692-1974312	chr4	+	1973795	1974201	True	NR_030641,NR_003004	chr4,chr4	-,+	MIR943,SCARNA22	14053,2161
chr19:52380048-52380368	chr19	+	52380273	52380401	True	NR_024181,NM_001031721	chr19,chr19	-,+	ZNF577,ZNF613	10838,50286
chr6:71276992-71277681	chr6	+	71277094	71277733	True	NM_145267,NM_001851	chr6,chr6	+,-	C6orf57,COL9A1	-521,-264308
chr6:26215559-26216276	chr6	+	26215720	26215990	True	NM_003532,NM_003518,NM_021052	chr6,chr6,chr6	+,-,+	HIST1H3E,HIST1H2BG,HIST1H2AE	9392,932,1157
chr15:102188765-102189761	chr15	+	102188808	102189786	True	NM_078474,NM_025141,NM_001005326	chr15,chr15,chr15	-,-,+	TM2D3,TM2D3,OR4F6	2859,2859,156136
chr10:28286730-28287452	chr10	+	28286730	28287235	True	NM_021252,NM_018076	chr10,chr10	+,-	RAB18,ARMC4	-493534,794
chr19:55875255-55876065	chr19	+	55875344	55876016	True	NM_000641,NM_144613,NM_001145402,NM_139172	chr19,chr19,chr19,chr19	-,-,-,+	IL11,COX6B2,FAM71E2,TMEM190	5848,-9162,-724,12187
chr1:40938308-40939488	chr1	+	40938426	40939216	True	NM_001852,NM_198494	chr1,chr1	-,+	COL9A2,ZNF642	-155487,4085
chr2:225447949-225448976	chr2	+	225448216	225448940	True	NM_022915,NM_003590	chr2,chr2	+,-	MRPL44,CUL3	-626151,1220
chr9:65629327-65630470	chr9	+	65629744	65629816	True	NR_024496,NM_015667	chr9,chr9	+,-	LOC442421,FAM75A7	864452,-120134
chr9:85042656-85044355	chr9	+	85042660	85043983	True	NM_152573,NM_001001670	chr9,chr9	-,+	RASEF,FAM75D1	634111,-439027
chr9:85042656-85044355	chr9	-	94870991	94871049	False	NR_015444,NM_006415,NM_178324	chr9,chr9,chr9	+,-,-	LOC100128076,SPTLC1,SPTLC1	24066,6699,6699
chr9:136605293-136605666	chr9	+	136605308	136605483	True	NM_007101,NM_000787,NM_001134707	chr9,chr9,chr9	-,+,-	SARDH,DBH,SARDH	-231,-103874,-1829
chr3:50365969-50366438	chr3	+	50365992	50366262	True	NM_007275,NM_033158,NM_007022,NM_170713,NM_170712,NM_003773	chr3,chr3,chr3,chr3,chr3,chr3	-,-,+,-,-,-	TUSC2,HYAL2,CYB561D2,RASSF1,RASSF1,HYAL2	-324,-5711,22034,8683,9452,-5711
chr1:92345877-92347316	chr1	+	92346244	92347115	True	NM_207189,NM_003243,NR_036634,NM_001195683	chr1,chr1,chr1,chr1	+,-,-,-	BRDT,TGFBR3,TGFBR3,TGFBR3	67812,4772,4772,4772
chrX:66767060-66768852	chrX	+	66767303	66768829	True	NM_000044,NM_002547	chrX,chrX	+,-	AR,OPHN1	-3485,884521
chr17:26635218-26635880	chr17	+	26635356	26635920	True	NM_014573,NR_028334	chr17,chr17	+,-	TMEM97,FLJ40504	10200,-948
chr21:44782009-44782358	chr21	+	44782126	44782264	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	87639,64788
chr18:55708127-55708604	chr18	+	55708315	55708630	True	NM_001144967,NM_015277,NM_001144964,NM_005603	chr18,chr18,chr18,chr18	+,+,+,-	NEDD4L,NEDD4L,NEDD4L,ATP8B1	2988,2988,5827,-237988
chr6:144297864-144298930	chr6	+	144297993	144298979	True	NM_001013623,NM_001080952	chr6,chr6	+,-	C6orf94,PLAGL1	-112485,30612
chr2:219576472-219577231	chr2	+	219576472	219577081	True	NM_022453,NM_014640	chr2,chr2	-,+	RNF25,TTLL4	-39691,-957
chr5:169064449-169065327	chr5	+	169064604	169065340	True	NM_003062,NM_004946	chr5,chr5	-,+	SLIT3,DOCK2	-336471,-404
chr4:7195550-7196350	chr4	+	7195549	7196271	True	NM_020777,NR_027441	chr4,chr4	+,-	SORCS2,FLJ36777	-1226,-90446
chr19:49992310-49993489	chr19	+	49992321	49993419	True	NR_001285,NR_000020,NR_026712,NR_000021,NM_012423,NR_000019,NR_000018,NM_001015,NR_029703	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,+,+,+,-	SNORD35B,SNORD33,RPL13AP5,SNORD32A,RPL13A,SNORD34,SNORD35A,RPS11,MIR150	7556,454,-1507,-59,-1507,744,1012,6214,10756
chr11:18614242-18615897	chr11	+	18614397	18615733	True	NM_153347,NM_001040697,NM_018314	chr11,chr11,chr11	+,-,-	TMEM86A,UEVLD,UEVLD	104617,-4116,-4116
chr13:27333868-27334490	chr13	+	27333873	27334443	True	NM_005288,NM_006646	chr13,chr13	-,+	GPR12,WASF3	529,-202084
chr17:61935635-61936091	chr17	+	61935742	61935970	True	NM_020991,NR_002947	chr17,chr17	-,+	CSH2,TCAM1P	15171,-1426
chr14:88789042-88789347	chr14	+	88789066	88789250	True	NM_021161,NM_001040428,NM_138317	chr14,chr14,chr14	-,+,-	KCNK10,SPATA7,KCNK10	4056,62737,393
chr2:24346675-24348521	chr2	+	24346876	24348498	True	NM_199346,NM_001145710	chr2,chr2	-,+	PFN4,LOC375190	-725,-577
chr12:55719304-55720543	chr12	+	55719428	55720561	True	NM_001005493,NM_054104,NM_001005182	chr12,chr12,chr12	-,+,+	OR6C6,OR6C3,OR6C1	-30412,4923,-5095
chr3:195713881-195714568	chr3	+	195713946	195714310	True	NR_034088,NR_003264	chr3,chr3	+,-	LOC401109,SDHAP1	155196,2893
chr3:195713881-195714568	chr3	+	197351770	197351903	False	NR_003266,NM_001011537	chr3,chr3	-,+	LOC220729,FYTTD1	2902,124520
chr3:195713881-195714568	chr3	-	195387791	195387924	False	NM_001647,NR_003265	chr3,chr3	-,+	APOD,SDHAP2	-76715,-2935
chrX:48919367-48920059	chrX	+	48919380	48919850	True	NM_007213,NM_033626,NM_001163322,NM_001163323,NM_001163321	chrX,chrX,chrX,chrX,chrX	-,+,+,+,+	PRAF2,CCDC120,CCDC120,CCDC120,CCDC120	11862,-2915,-2915,-2908,-2908
chr11:440892-441141	chr11	+	440908	441134	True	NM_030783,NM_001012302	chr11,chr11	+,-	PTDSS2,ANO9	9145,927
chr3:52017655-52017973	chr3	+	52017740	52017920	True	NM_001198898,NM_001198896,NM_000666,NM_001198895,NM_001146314,NR_027476,NM_015407,NM_001198897,NR_037192,NM_032750	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,-,-,+,+,+,-	ACY1,ACY1,ACY1,ACY1,ABHD14B,ABHD14B,ABHD14A,ACY1,ABHD14A-ACY1,ABHD14B	-491,-491,-491,-491,-9094,-9094,-8749,-491,-8749,-9094
chr2:233633497-233633988	chr2	+	233633581	233633916	True	NM_001172416,NM_001172417,NM_015575,NM_002242	chr2,chr2,chr2,chr2	-,-,+,-	KCNJ13,KCNJ13,GIGYF2,KCNJ13	7410,7410,-71632,7410
chr5:176922026-176922403	chr5	+	176922037	176922215	True	NM_213636,NM_001174102,NM_203352,NM_005451	chr5,chr5,chr5,chr5	-,+,-,-	PDLIM7,PRR7,PDLIM7,PDLIM7	2437,-46762,2437,2437
chr11:34461440-34462200	chr11	+	34461554	34462049	True	NM_001752,NM_198381	chr11,chr11	+,-	CAT,ELF5	-1133,71354
chr20:12999095-12999561	chr20	+	12999097	12999579	True	NM_018327,NM_017714	chr20,chr20	+,-	SPTLC3,TASP1	-9528,620062
chr1:220263998-220265089	chr1	+	220264690	220264926	True	NM_018060,NM_006085	chr1,chr1	+,-	IARS2,BPNT1	2528,-1499
chr16:18812726-18812975	chr16	+	18812743	18813023	True	NM_015161,NM_024847	chr16,chr16	-,+	ARL6IP1,TMC7	28,182232
chr19:55347507-55347873	chr19	+	55347633	55347921	True	NM_012314,NM_001127255	chr19,chr19	+,-	KIR2DS4,NLRP7	-3510,111002
chr2:21268122-21268916	chr2	+	21268221	21268773	True	NM_182828,NM_000384	chr2,chr2	+,-	GDF7,APOB	-401855,-1276
chr1:2342485-2342765	chr1	+	2342498	2342638	True	NM_002617,NM_007033,NM_153818	chr1,chr1,chr1	-,+,-	PEX10,RER1,PEX10	1422,-19335,1422
chr12:114847929-114848211	chr12	+	114848028	114848256	True	NM_181486,NM_080718,NM_000192,NM_080717,NM_138432	chr12,chr12,chr12,chr12,chr12	-,-,-,-,+	TBX5,TBX5,TBX5,TBX5,SDSL	-4139,-6325,-1781,-1781,-987868
chr14:94256821-94257513	chr14	+	94256823	94257533	True	NM_138344,NM_178013	chr14,chr14	+,-	FAM181A,PRIMA1	127724,-2057
chr9:35792700-35792935	chr9	+	35792782	35792972	True	NM_003995,NM_172312	chr9,chr9	+,-	NPR2,SPAG8	-427,19337
chr1:36850538-36850738	chr1	+	36850557	36850703	True	NM_024676,NM_032017	chr1,chr1	+,-	SH3D21,STK40	-77900,832
chr20:62695612-62696147	chr20	+	62695618	62696066	True	NM_198723,NM_018419,NM_003195,NM_005873	chr20,chr20,chr20,chr20	+,-,+,-	TCEA2,SOX18,TCEA2,RGS19	-7230,-14639,-1659,14829
chr7:6524728-6525428	chr7	+	6524958	6525477	True	NM_006854,NM_001134387,NM_001100603	chr7,chr7,chr7	-,+,-	KDELR2,ZDHHC4,KDELR2	-1109,91587,-1109
chrX:74631206-74632357	chrX	+	74631898	74632221	True	NM_001146256,NR_030774	chrX,chrX	-,+	ZDHHC15,UPRT	111169,-138056
chr21:31719560-31721041	chr21	+	31719869	31720964	True	NM_001077711,NM_181599,NM_181624	chr21,chr21,chr21	-,+,-	KRTAP27-1,KRTAP13-1,KRTAP23-1	-9857,47427,10
chr16:12898968-12899242	chr16	+	12899091	12899282	True	NM_001145205,NM_018340,NM_001099455	chr16,chr16,chr16	+,-,-	SHISA9,CPPED1,CPPED1	96194,-1347,-1347
chr1:214727132-214727833	chr1	+	214727150	214727779	True	NM_016343,NM_005401	chr1,chr1	+,-	CENPF,PTPN14	48752,-2126
chr16:2262413-2262808	chr16	+	2262417	2262857	True	NM_001199174,NM_001199175,NM_001199173,NM_182563,NM_022372,NM_001042371	chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,-,+,-	MLST8,MLST8,MLST8,C16orf79,MLST8,PGP	-6736,-7290,-7290,-1348,-7290,2015
chr11:62380759-62381004	chr11	+	62380858	62381044	True	NM_153265,NM_012200,NM_000327	chr11,chr11,chr11	-,-,+	EML3,B3GAT3,ROM1	-621,8454,-696
chr15:21284557-21285559	chr15	+	21284756	21285436	True	NR_027411,NR_028506	chr15,chr15	+,-	GOLGA8C,NF1P1	-517135,-150131
chr15:21284557-21285559	chr15	+	20277567	20278247	False	NR_036432,NR_027411	chr15,chr15	-,+	HERC2P3,GOLGA8C	433236,489426
chr1:152008188-152008403	chr1	+	152008235	152008435	True	NR_024237,NM_005620	chr1,chr1	+,-	LOC100132111,S100A11	-197350,1126
chr10:114710806-114711012	chr10	+	114710813	114711042	True	NM_030756,NM_001146283,NM_001198531,NM_001198530,NM_001146284,NM_001146285,NM_001146286,NM_001198526,NM_001198527,NM_001198525,NM_022494,NM_001198528,NM_001198529,NM_001146274	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,+,+,+,+,+,-,+,+,+	TCF7L2,TCF7L2,TCF7L2,TCF7L2,TCF7L2,TCF7L2,TCF7L2,TCF7L2,TCF7L2,TCF7L2,ZDHHC6,TCF7L2,TCF7L2,TCF7L2	-855,-855,-855,-855,-855,-855,-855,-855,-855,-855,-504141,-855,-855,-855
chr16:84539409-84539910	chr16	+	84539408	84539824	True	NM_014861,NM_020947	chr16,chr16	+,-	ATP2C2,KIAA1609	-137327,-1120
chr7:141424948-141425279	chr7	+	141424971	141425131	True	NM_003143,NR_015392	chr7,chr7	+,-	SSBP1,FLJ40852	13044,12957
chr5:175841770-175842220	chr5	+	175841779	175842219	True	NM_001834,NM_007097,NM_138820	chr5,chr5,chr5	-,-,+	CLTB,CLTB,HIGD2A	1371,1371,-26059
chr19:48256098-48256420	chr19	+	48256291	48256397	True	NM_015710,NM_198479,NR_003048	chr19,chr19,chr19	+,-,+	GLTSCR2,TPRX1,SNORD23	-7549,50514,2712
chr1:68150398-68150635	chr1	+	68150418	68150592	True	NM_018841,NM_001924,NM_001199741,NM_001199742	chr1,chr1,chr1,chr1	-,+,+,+	GNG12,GADD45A,GADD45A,GADD45A	148613,267,267,267
chr9:113800229-113800433	chr9	+	113800238	113800410	True	NM_057159,NM_001401,NM_005592	chr9,chr9,chr9	-,-,+	LPAR1,LPAR1,MUSK	5,5,-369238
chr16:67022959-67024044	chr16	+	67023171	67023945	True	NM_173815,NR_024525	chr16,chr16	+,-	CES4A,FAM96B	-741,-54851
chr8:54795171-54795382	chr8	+	54795304	54795382	True	NM_003702,NM_213619	chr8,chr8	+,-	RGS20,ATP6V1H	-1913,-39454
chr8:99953020-99953249	chr8	+	99953020	99953178	True	NM_053001,NM_006281,NM_001142462	chr8,chr8,chr8	+,-,+	OSR2,STK3,OSR2	3452,-115111,3452
chr10:88775803-88776330	chr10	+	88775805	88776077	True	NM_024756,NM_001146157	chr10,chr10	-,+	MMRN2,FAM25A	-58380,3968
chr6:150216176-150217024	chr6	+	150216645	150216994	True	NM_025217,NM_139165	chr6,chr6	+,-	ULBP2,RAET1E	46141,-4548
chr15:25422656-25423135	chr15	+	25422739	25423159	True	NR_003304,NM_130838,NR_003298,NR_003299,NR_001291,NR_003300,NR_003301,NR_003302,NR_003296,NR_003297,NR_003294,NR_003295	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,-,+,+,+,+,+,+,+,+,+,+	SNORD115-12,UBE3A,SNORD115-6,SNORD115-7,SNORD115-1,SNORD115-8,SNORD115-9,SNORD115-10,SNORD115-4,SNORD115-5,SNORD115-2,SNORD115-3	728,227544,2484,4372,-6920,6293,728,728,-811,725,-5008,-2716
chr1:37940635-37941196	chr1	+	37940783	37941061	True	NM_022756,NM_025079	chr1,chr1	-,+	MEAF6,ZC3H12A	39353,-715
chrX:135861557-135862959	chrX	+	135861680	135862982	True	NM_004840,NM_000074	chrX,chrX	-,+	ARHGEF6,CD40LG	575,-131403
chr1:48263724-48265334	chr1	+	48263824	48265224	True	NM_001194986,NM_004474	chr1,chr1	-,+	LOC388630,FOXD2	197388,-362186
chr11:112019445-112019868	chr11	+	112019478	112019618	True	NM_001562,NM_031275	chr11,chr11	-,+	IL18,TEX12	15272,18476
chr5:94845204-94846485	chr5	+	94845257	94846145	True	NM_014639,NM_198150	chr5,chr5	-,+	TTC37,ARSK	44621,44679
chr11:449361-449664	chr11	+	449403	449663	True	NM_030783,NM_001012302	chr11,chr11	+,-	PTDSS2,ANO9	616,-7392
chr5:6716617-6718109	chr5	+	6716842	6717998	True	NM_001171805,NR_037947,NM_006999	chr5,chr5,chr5	+,-,+	PAPD7,NSUN2,PAPD7	-2175,-83369,-2175
chr16:10972585-10972886	chr16	+	10972664	10972776	True	NM_000246,NM_001079512	chr16,chr16	+,-	CIITA,FAM18A	-1660,-60043
chr14:58891440-58893014	chr14	+	58891592	58892484	True	NM_012460,NM_014749	chr14,chr14	-,+	TIMM9,KIAA0586	1811,2225
chrX:74143270-74143561	chrX	+	74143346	74143577	True	NM_145052,NM_001008537	chrX,chrX	+,-	UPRT,KIAA2022	350316,1763
chr3:40499194-40499406	chr3	+	40499193	40499368	True	NR_033965,NM_001034996,NM_003973	chr3,chr3,chr3	-,+,+	FLJ33065,RPL14,RPL14	-148004,-414,-443
chrX:13399743-13400041	chrX	+	13399764	13399954	True	NM_001167890,NM_001135995	chrX,chrX	+,-	EGFL6,ATXN3L	187739,-61246
chr5:180689045-180689373	chr5	+	180689045	180689215	True	NM_201627	chr5	+	TRIM41	-38790
chr15:64388042-64388267	chr15	+	64388127	64388213	True	NM_032231,NM_001014812,NM_148955,NM_003099,NM_152826	chr15,chr15,chr15,chr15,chr15	-,-,+,+,+	FAM96A,FAM96A,SNX1,SNX1,SNX1	-1920,-1920,-1,-1,-1
chr12:112846064-112846573	chr12	+	112846156	112846548	True	NM_002834,NM_000970,NM_001024662	chr12,chr12,chr12	+,-,-	PTPN11,RPL6,RPL6	9987,952,952
chr1:113255487-113256924	chr1	+	113255530	113256613	True	NM_001042678,NM_001042679,NM_175744,NM_001004440,NM_005167,NM_182759	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,+	RHOC,RHOC,RHOC,FAM19A3,PPM1J,FAM19A3	-5505,-5852,-5505,6575,1387,6575
chr1:147417707-147417997	chr1	+	147417706	147417830	True	NR_003377,NM_001097616	chr1,chr1	-,+	PDZK1P1,GPR89C	66551,7736
chr1:147417707-147417997	chr1	-	145809723	145809847	False	NM_001097612,NM_001097616	chr1,chr1	-,+	GPR89A,GPR89C	17307,74020
chr19:55141805-55142703	chr19	+	55141907	55142503	True	NM_001081639,NM_001081638,NM_001081637,NM_145057	chr19,chr19,chr19,chr19	+,+,+,-	LILRB1,LILRB1,LILRB1,CDC42EP5	-50,-50,10,-157485
chr1:55232043-55233150	chr1	+	55232145	55233092	True	NM_001110533,NM_152268	chr1,chr1	+,-	C1orf177,PARS2	38643,-1919
chr12:6691059-6691406	chr12	+	6691274	6691366	True	NR_003012,NM_002046	chr12,chr12	-,+	SCARNA11,GAPDH	-499,-47668
chr21:46221898-46222177	chr21	+	46221916	46222222	True	NM_182688,NM_003343,NM_198699,NM_001202489	chr21,chr21,chr21,chr21	-,-,+,-	UBE2G2,UBE2G2,KRTAP10-12,UBE2G2	-165,-165,-104880,-165
chr17:61849704-61849972	chr17	+	61849944	61850020	True	NM_203499,NM_007372,NM_020198	chr17,chr17,chr17	+,+,-	DDX42,DDX42,CCDC47	1546,1546,1118
chr19:17622989-17623209	chr19	+	17623149	17623209	True	NM_012088,NM_138454	chr19,chr19	+,-	PGLS,NXNL1	-768,-51424
chr15:85361949-85363278	chr15	+	85362114	85363210	True	NM_014300,NM_020778	chr15,chr15	-,+	SEC11A,ALPK3	-102440,-2254
chr1:93427652-93428166	chr1	+	93427931	93428182	True	NM_001006605,NM_001164391	chr1,chr1	-,+	FAM69A,MTF2	-852,116609
chr19:51877501-51877778	chr19	+	51877533	51877825	True	NM_001985,NM_152353,NR_033235,NM_005601	chr19,chr19,chr19,chr19	-,-,+,-	ETFB,CLDND2,LOC100129083,NKG7	-7861,-5276,41334,-1573
chr2:46525407-46525630	chr2	+	46525407	46525619	True	NM_001430,NM_080653	chr2,chr2	+,-	EPAS1,ATP6V1E2	-917,221527
chr17:48625655-48626559	chr17	+	48625657	48626549	True	NM_022827,NM_001267	chr17,chr17	+,-	SPATA20,CHAD	-1146,-79430
chr4:153427576-153429111	chr4	+	153427585	153428932	True	NR_036092,NR_033797	chr4,chr4	-,+	MIR3140,DKFZP434I0714	-17017,28483
chr3:28493908-28495426	chr3	+	28494388	28495254	True	NM_001040432,NM_001134433	chr3,chr3	+,-	ZCWPW2,AZI2	-62465,-103770
chr15:66639426-66640550	chr15	+	66639544	66640339	True	NM_017858,NR_004388,NM_002755	chr15,chr15,chr15	-,-,+	TIPIN,SCARNA14,MAP2K1	8774,0,38871
chr8:41504564-41504950	chr8	+	41504568	41504704	True	NM_152568,NM_178819	chr8,chr8	-,+	NKX6-3,AGPAT6	224,-68912
chr18:77865226-77867042	chr18	+	77865342	77866932	True	NM_014913,NM_006701	chr18,chr18	+,-	ADNP2,TXNL4A	-18,-116810
chr5:150632645-150633109	chr5	+	150632680	150633148	True	NM_000405,NM_015621,NM_001167607	chr5,chr5,chr5	+,-,+	GM2A,CCDC69,GM2A	-118,-29026,-118
chr18:21816816-21817123	chr18	+	21816849	21817151	True	NR_031724,NM_018030	chr18,chr18	+,-	MIR320C2,OSBPL1A	84498,35095
chr8:120221193-120221811	chr8	+	120221239	120221848	True	NM_052886,NM_002546	chr8,chr8	+,-	MAL2,TNFRSF11B	-680,-256856
chr3:15243342-15244267	chr3	+	15243584	15243781	True	NR_027927,NM_014296	chr3,chr3	-,+	COL6A4P1,CAPN7	3744,3951
chr8:95487298-95487773	chr8	+	95487395	95487638	True	NM_001205262,NM_012415,NM_001034915	chr8,chr8,chr8	-,-,+	RAD54B,RAD54B,ESRP1	-52,-52,165725
chr10:134972386-134972860	chr10	+	134972493	134972733	True	NR_030170,NM_152643	chr10,chr10	-,+	MIR202,KNDC1	88441,1237
chr14:31677902-31679319	chr14	+	31678204	31679169	True	NM_015382,NM_001128126	chr14,chr14	-,+	HECTD1,AP4S1	-1515,-183572
chr22:32596160-32596798	chr22	+	32596311	32596841	True	NM_006605,NR_033411,NM_001098527,NM_001159546,NM_001159545	chr22,chr22,chr22,chr22,chr22	-,+,-,-,-	RFPL2,SLC5A1,RFPL2,RFPL2,RFPL2	-6845,-141205,2673,1746,3927
chr3:190964114-190965915	chr3	+	190964558	190965964	True	NM_198184,NM_198152	chr3,chr3	+,-	OSTN,UTS2D	-34294,82413
chr20:1205103-1206127	chr20	+	1205345	1206168	True	NM_018354,NM_001136566	chr20,chr20	-,+	C20orf46,RAD21L1	-40228,595
chr19:48246965-48248208	chr19	+	48247142	48248036	True	NM_015710,NM_198479	chr19,chr19	+,-	GLTSCR2,TPRX1	756,58875
chr3:197464136-197465970	chr3	+	197464187	197465198	True	NM_001011537,NM_014687	chr3,chr3	+,-	FYTTD1,KIAA0226	11225,-414
chr17:17181387-17183298	chr17	+	17181499	17183235	True	NM_001199125,NM_003653,NM_020201	chr17,chr17,chr17	-,-,+	COPS3,COPS3,NT5M	838,1443,23444
chr1:21996705-21997103	chr1	+	21996782	21997114	True	NM_002885,NM_001145657,NM_001013693	chr1,chr1,chr1	-,-,+	RAP1GAP,RAP1GAP,LDLRAD2	-926,-926,141643
chr14:52117719-52118071	chr14	+	52117890	52118038	True	NR_037676,NM_152330	chr14,chr14	-,+	C14orf82,FRMD6	474,537
chr17:39523878-39525735	chr17	+	39524101	39525653	True	NM_030975,NM_002279	chr17,chr17	+,-	KRTAP9-9,KRT33B	-112523,444
chr22:43583812-43584533	chr22	+	43583843	43584382	True	NM_015140,NM_007311	chr22,chr22	-,+	TTLL12,TSPO	-706,-36359
chr3:15558003-15558960	chr3	+	15558043	15558985	True	NM_005677,NM_000060,NM_080539	chr3,chr3,chr3	-,+,-	COLQ,BTD,COLQ	4323,84269,4323
chr7:2597977-2598519	chr7	+	2597981	2598223	True	NM_001100390,NM_152558,NM_152743	chr7,chr7,chr7	+,+,-	IQCE,IQCE,BRAT1	408,408,-2589
chr2:234759539-234759943	chr2	+	234759604	234759964	True	NM_018410,NM_024080	chr2,chr2	-,+	HJURP,TRPM8	3298,66078
chr3:25708233-25709613	chr3	+	25708460	25709389	True	NM_001068,NM_001145391	chr3,chr3	-,+	TOP2B,OXSM	-2672,122173
chr11:125437895-125439202	chr11	+	125438198	125439087	True	NM_001007277,NM_022549,NM_004879	chr11,chr11,chr11	+,-,+	EI24,FEZ1,EI24	210,-71992,210
chr5:141351371-141352894	chr5	+	141351690	141352668	True	NM_183399,NM_183398,NM_001201365,NM_016580,NM_183401,NM_183400,NM_004290	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,-,+,+,+	RNF14,RNF14,RNF14,PCDH12,RNF14,RNF14,RNF14	-5351,-3302,-5351,-13063,-3041,-3302,-3302
chr9:116613882-116615455	chr9	+	116613962	116615389	True	NM_133374,NM_001633	chr9,chr9	+,-	ZNF618,AMBP	23172,225414
chr21:38522745-38524079	chr21	+	38522793	38524097	True	NR_028352,NR_026719	chr21,chr21	-,+	PIGP,DSCR9	-77335,56857
chr18:21016285-21017420	chr18	+	21016286	21017199	True	NM_003831,NM_032933	chr18,chr18	+,-	RIOK3,C18orf45	15587,782
chr4:54963767-54964848	chr4	+	54963914	54964760	True	NM_133267,NM_012110	chr4,chr4	+,-	GSX2,CHIC2	1487,-33126
chr1:6297050-6297599	chr1	+	6297146	6297475	True	NM_012405,NM_001024598	chr1,chr1	-,+	ICMT,HES3	-1102,6776
chr7:6522183-6522847	chr7	+	6522187	6522833	True	NM_006854,NM_001134387,NM_001100603	chr7,chr7,chr7	-,+,-	KDELR2,ZDHHC4,KDELR2	1066,94231,1066
chr10:89620935-89621993	chr10	+	89620976	89621692	True	NM_000314,NM_001126049	chr10,chr10	+,-	PTEN,KLLN	1502,1552
chr5:173160610-173160997	chr5	+	173160617	173160938	True	NR_027109,NM_138369	chr5,chr5	+,-	LOC285593,BOD1	-154011,-116951
chr1:47123375-47124835	chr1	+	47123408	47124397	True	NM_022745,NM_001042546,NM_001145474	chr1,chr1,chr1	-,-,+	ATPAF1,ATPAF1,C1orf223	9753,9753,13102
chr2:207140018-207140795	chr2	+	207140195	207140682	True	NM_020923,NM_005279	chr2,chr2	+,-	ZDBF2,GPR1	-723,-57424
chr17:80315263-80316480	chr17	+	80315618	80316527	True	NM_003004,NM_207459	chr17,chr17	-,+	SECTM1,TEX19	-23697,595
chr1:26349255-26349632	chr1	+	26349364	26349514	True	NM_001004434,NM_004455	chr1,chr1	-,+	SLC30A2,EXTL1	23140,-1144
chr2:133033191-133034636	chr2	+	133033535	133034650	True	NM_001508,NR_027020	chr2,chr2	+,-	GPR39,ANKRD30BL	139496,-17993
chrX:53111013-53111444	chrX	+	53111136	53111404	True	NM_022117,NM_014138	chrX,chrX	+,-	TSPYL2,FAM156A	137,-124960
chr3:99982137-99983109	chr3	+	99982287	99982996	True	NM_018309,NM_014820,NM_001199198	chr3,chr3,chr3	+,-,+	TBC1D23,TOMM70A,TBC1D23	-2659,137279,-2659
chr3:62359524-62359738	chr3	+	62359536	62359691	True	NM_018008,NM_020685	chr3,chr3	-,+	FEZF2,C3orf14	-346,-54191
chr11:72984744-72985835	chr11	+	72984830	72985824	True	NM_014824,NM_176797,NM_176796,NM_004154,NM_176798	chr11,chr11,chr11,chr11,chr11	-,+,+,+,+	FCHSD2,P2RY6,P2RY6,P2RY6,P2RY6	-131687,-9311,-9311,-1634,-3942
chr1:151885185-151886317	chr1	+	151885395	151886357	True	NR_024237,NM_053055	chr1,chr1	+,-	LOC100132111,THEM4	-74507,-3034
chr1:24065117-24065853	chr1	+	24065340	24065703	True	NM_003198,NM_001127621	chr1,chr1	+,-	TCEB3,GALE	4152,60416
chr1:220224269-220225835	chr1	+	220224596	220225883	True	NM_004446,NM_018060	chr1,chr1	-,+	EPRS,IARS2	-4596,41571
chr6:26239648-26240112	chr6	+	26239777	26240005	True	NM_003547,NM_005320,NM_003540	chr6,chr6,chr6	-,-,+	HIST1H4G,HIST1H1D,HIST1H4F	7255,-4561,648
chr13:114320923-114321197	chr13	+	114320945	114321228	True	NM_000705,NM_002929	chr13,chr13	-,+	ATP4B,GRK1	-8432,368
chr19:36526108-36526373	chr19	+	36526270	36526352	True	NM_001083961,NM_001199570,NM_015526	chr19,chr19,chr19	+,-,-	WDR62,CLIP3,CLIP3	19430,-2697,-2473
chr7:23333713-23335534	chr7	+	23334050	23335558	True	NM_138446,NM_006547	chr7,chr7	+,-	C7orf30,IGF2BP3	3381,174487
chr15:78596315-78597995	chr15	+	78596755	78597625	True	NM_025234,NM_004378	chr15,chr15	-,+	WDR61,CRABP1	-4815,35040
chr20:23016732-23017243	chr20	+	23016900	23017100	True	NM_001052,NM_000361	chr20,chr20	+,-	SSTR4,THBD	-894,13251
chr14:55656871-55657868	chr14	+	55657104	55657885	True	NR_003225,NM_001146015,NM_014750	chr14,chr14,chr14	+,-,-	LGALS3,DLGAP5,DLGAP5	-53459,562,562
chr3:101576711-101577629	chr3	+	101576711	101577677	True	NM_000986,NM_031419	chr3,chr3	-,+	RPL24,NFKBIZ	-171148,-8414
chr1:229751078-229752096	chr1	+	229751189	229751654	True	NM_014409,NM_014777	chr1,chr1	-,+	TAF5L,URB2	10196,10326
chr3:63104320-63104791	chr3	+	63104363	63104782	True	NM_183394,NR_027104	chr3,chr3	-,+	CADPS,LOC285401	-243299,-16057
chr19:9645040-9645564	chr19	+	9645176	9645609	True	NM_024106,NM_001172651	chr19,chr19	-,+	ZNF426,ZNF177	3744,-158237
chr8:86877069-86878862	chr8	+	86877186	86878861	True	NR_003594	chr8	-	REXO1L2P	-37015
chr6:35423175-35423547	chr6	+	35423453	35423537	True	NM_003214,NM_021922	chr6,chr6	-,+	TEAD3,FANCE	41374,-3366
chr15:30864327-30864704	chr15	+	30864604	30864666	True	NR_027470,NM_148911,NR_026858	chr15,chr15,chr15	+,-,+	FAM7A2,CHRFAM7A,FAM7A1	91,-178740,91
chr15:30864327-30864704	chr15	-	30686007	30686069	False	NM_148911,NM_139320,NR_026858	chr15,chr15,chr15	-,-,+	CHRFAM7A,CHRFAM7A,FAM7A1	-143,-143,178688
chr15:30864327-30864704	chr15	-	32727341	32727403	False	NR_027470,NR_026859,NR_026858,NM_199357	chr15,chr15,chr15,chr15	-,-,-,+	FAM7A2,FAM7A3,FAM7A1,ARHGAP11A	-91,-276,-91,180287
chr8:38850705-38852362	chr8	+	38850738	38852400	True	NM_031940,NM_003816,NM_078473,NR_027638,NR_027639,NM_001024380,NM_001024381,NR_027878	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,+,-,+,+,-,-,+	TM2D2,ADAM9,TM2D2,ADAM9,ADAM9,TM2D2,TM2D2,ADAM9	1691,2104,1691,2104,2104,1691,1691,2104
chr22:40283354-40284522	chr22	+	40283500	40284218	True	NM_004810,NM_152512	chr22,chr22	+,-	GRAP2,ENTHD1	12867,5638
chr5:94986656-94988606	chr5	+	94986884	94988288	True	NM_031952,NM_001131066,NM_173362,NM_001131065	chr5,chr5,chr5,chr5	-,+,+,+	SPATA9,RFESD,RFESD,RFESD	30476,-4467,-4365,-4365
chrX:147581347-147581922	chrX	+	147581435	147581825	True	NM_002025,NR_024503,NM_001169124,NM_001169125,NM_001169122,NM_001169123	chrX,chrX,chrX,chrX,chrX,chrX	+,-,+,+,+,+	AFF2,FMR1-AS1,AFF2,AFF2,AFF2,AFF2	313,-577759,313,313,313,313
chr6:90349076-90350445	chr6	+	90349141	90350068	True	NM_020466,NR_028495,NR_028494,NR_028493,NM_001137667	chr6,chr6,chr6,chr6,chr6	-,-,-,-,+	LYRM2,LYRM2,LYRM2,LYRM2,CASP8AP2	-667,-925,-925,-925,189550
chr5:43040847-43041116	chr5	+	43040851	43041157	True	NM_001014279,NR_015447	chr5,chr5	-,+	C5orf39,LOC153684	-404,1078
chr16:2012525-2013108	chr16	+	2012897	2013109	True	NR_003142,NM_174903,NM_005061,NM_002952,NR_002327,NR_002326,NM_006453,NR_003020,NM_004548	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,-,-,-,-,+,+,+	SNHG9,RNF151,RPL3L,RPS2,SNORA10,SNORA64,TBL3,SNORA78,NDUFB10	1887,3765,-8218,1768,-430,48,8954,2075,-3431
chr10:43932021-43932242	chr10	+	43932043	43932121	True	NR_026693,NM_001098204	chr10,chr10	+,-	ZNF487P,HNRNPF	452,-27347
chr3:56718449-56719009	chr3	+	56718451	56718836	True	NR_024460,NM_001112736	chr3,chr3	+,-	CCDC66,C3orf63	-127318,-1316
chr16:58058978-58059585	chr16	+	58059021	58059533	True	NM_020807,NM_002428	chr16,chr16	-,+	ZNF319,MMP15	-25259,54
chr6:33260901-33261252	chr6_qbl_hap6	+	4493272	4493415	False	NM_001164267,NR_028387,NM_004761,NM_005452,NM_001185181,NM_014260	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	-,-,-,-,+,+	WDR46,RGL2,RGL2,WDR46,PFDN6,PFDN6	-3725,6052,6052,-3725,-3668,-3702
chr6:33260901-33261252	chr6_mcf_hap5	+	4734776	4734919	False	NR_028387,NM_014260,NM_004761,NM_001164267,NM_005452	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	-,+,-,-,-	RGL2,PFDN6,RGL2,WDR46,WDR46	6052,-3705,6052,-3728,-3728
chr6:33260901-33261252	chr6_cox_hap2	+	4704846	4704989	False	NR_028387,NM_014260,NM_004761,NM_001164267,NM_005452	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	-,+,-,-,-	RGL2,PFDN6,RGL2,WDR46,WDR46	6052,-3705,6052,-3728,-3728
chr6:33260901-33261252	chr6	+	33261032	33261175	True	NM_001164267,NR_028387,NM_004761,NM_005452,NM_001185181,NM_014260	chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,-,+,+	WDR46,RGL2,RGL2,WDR46,PFDN6,PFDN6	-3728,6052,6052,-3728,-3671,-3705
chr6:33260901-33261252	chr6_dbb_hap3	+	4542358	4542501	False	NR_028387,NM_014260,NM_004761,NM_001164267,NM_005452	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	-,+,-,-,-	RGL2,PFDN6,RGL2,WDR46,WDR46	6052,-3705,6052,-3728,-3728
chr12:6307977-6308577	chr12	+	6308152	6308550	True	NM_001769,NM_000552	chr12,chr12	+,-	CD9,VWF	931,-74316
chr12:56847607-56849043	chr12	+	56847611	56848977	True	NM_003920,NM_012064,NM_207344	chr12,chr12,chr12	-,-,+	TIMELESS,MIP,SPRYD4	-4411,112,13323
chr1:203734260-203734466	chr1	+	203734264	203734500	True	NM_017773,NR_027902,NM_001136190	chr1,chr1,chr1	+,-,+	LAX1,C1orf157,LAX1	-32,275942,-32
chrX:117864597-117866538	chrX	+	117864668	117865880	True	NM_001560,NM_020721	chrX,chrX	+,-	IL13RA1,KIAA1210	-3164,418719
chr16:58164157-58164687	chr16	+	58164180	58164436	True	NM_013242,NM_002428	chr16,chr16	-,+	C16orf80,MMP15	-884,-104956
chr10:51566876-51568624	chr10	+	51567016	51568413	True	NM_005437,NM_006327,NM_001145263,NM_001145262,NM_001145261,NM_001145260	chr10,chr10,chr10,chr10,chr10,chr10	+,-,+,+,+,+	NCOA4,TIMM23,NCOA4,NCOA4,NCOA4,NCOA4	3950,54973,-1959,7871,-1959,-1959
chrX:16738990-16740371	chrX	+	16739188	16740346	True	NM_032796,NM_019857,NM_175859,NR_033181,NM_001144002	chrX,chrX,chrX,chrX,chrX	+,-,-,+,-	SYAP1,CTPS2,CTPS2,SYAP1,CTPS2	-1532,-8129,-8413,-1532,-8848
chr2:95939253-95939813	chr2	+	95939342	95939691	True	NM_001165978,NM_144707,NM_032788,NM_001165977	chr2,chr2,chr2,chr2	+,+,-,+	PROM2,PROM2,ZNF514,PROM2	509,509,-114079,509
chr9:112811311-112811524	chr9	+	112811338	112811522	True	NM_001012993,NM_001004065,NM_001198656	chr9,chr9,chr9	-,+,+	C9orf152,AKAP2,AKAP2	158941,-511,-511
chr19:47855265-47856334	chr19	+	47855293	47856307	True	NM_001009813,NM_014681	chr19,chr19	-,+	MEIS3,DHX34	66528,-2807
chr15:59663466-59663978	chr15	+	59663489	59663899	True	NM_152450,NM_004998	chr15,chr15	+,-	FAM81A,MYO1E	66472,1222
chr7:98866074-98866587	chr7	+	98866080	98866444	True	NM_001145715,NR_002147	chr7,chr7	-,+	KPNA7,MYH16	-60991,4479
chr6:119464036-119465353	chr6	+	119464105	119465194	True	NM_001100411,NM_014034	chr6,chr6	-,+	FAM184A,ASF1A	5214,-248915
chr2:70415478-70416259	chr2	+	70415668	70416199	True	NM_016297,NM_017880	chr2,chr2	+,-	PCYOX1,C2orf42	69031,2011
chr1:206948695-206950163	chr1	+	206948853	206950193	True	NM_153758,NM_000572	chr1,chr1	+,-	IL19,IL10	22021,-3014
chr9:140318612-140318982	chr9	+	140318685	140318890	True	NM_006647,NM_017820	chr9,chr9	+,-	NOXA1,EXD3	-889,-971
chr3:125543758-125544769	chr3	+	125543963	125544770	True	NR_024250,NR_031687	chr3,chr3	+,-	LOC100125556,MIR548I1	90673,-34568
chr1:110052603-110053095	chr1	+	110052609	110053078	True	NM_182580,NM_020703	chr1,chr1	+,-	CYB561D1,AMIGO1	-15959,-273
chr11:65083381-65083712	chr11	+	65083382	65083728	True	NM_001077241,NM_006779	chr11,chr11	-,+	SLC25A45,CDC42EP2	66464,-1102
chr20:3761967-3762942	chr20	+	3762100	3762733	True	NM_001810,NM_015417,NM_004358	chr20,chr20,chr20	-,-,+	CENPB,SPEF1,CDC25B	4657,2,13667
chr4:122301275-122301647	chr4	+	122301274	122301660	True	NM_198179,NR_024365	chr4,chr4	-,+	QRFPR,LOC100192379	571,384079
chr11:7039823-7041144	chr11	+	7040153	7041153	True	NM_013249,NM_176822	chr11,chr11	-,+	ZNF214,NLRP14	483,546
chr3:33760024-33761661	chr3	+	33760135	33761529	True	NM_015097,NR_027868	chr3,chr3	-,+	CLASP2,PDCD6IP	-287,78536
chr1:226926519-226926914	chr1	+	226926634	226926822	True	NM_002221,NM_000447	chr1,chr1	-,+	ITPKB,PSEN2	104,131450
chr11:62572178-62572667	chr11	+	62572278	62572566	True	NM_199337,NM_006362,NM_001081491	chr11,chr11,chr11	+,-,-	TMEM179B,NXF1,NXF1	-17456,448,448
chr6:135272995-135273213	chr6	+	135273031	135273257	True	NM_170771,NM_022568,NM_001193480,NM_005375	chr6,chr6,chr6,chr6	-,-,-,+	ALDH8A1,ALDH8A1,ALDH8A1,MYB	-1771,-1771,-1771,229195
chr19:48391353-48392087	chr19	+	48391714	48392137	True	NM_003167,NR_004437	chr19,chr19	-,+	SULT2A1,SNAR-A12	-2060,18797
chr2:37492119-37493627	chr2	+	37492200	37493300	True	NM_144736,NM_005760	chr2,chr2	+,-	C2orf56,CEBPZ	-33477,-33460
chr5:35048358-35050297	chr5	+	35048573	35050350	True	NM_194283,NM_031900	chr5,chr5	+,-	DNAJC21,AGXT2	-118927,-333
chr12:107349943-107350208	chr12	+	107350040	107350256	True	NM_001033050,NM_152261	chr12,chr12	-,+	MTERFD3,C12orf23	30723,-547
chr7:143891899-143892191	chr7	+	143891990	143892192	True	NM_001003702,NM_198495	chr7,chr7	-,+	ARHGEF35,CTAGE4	651,-11502
chr7:143891899-143892191	chr7	-	144053032	144053234	False	NM_005435,NM_001080413	chr7,chr7	+,-	ARHGEF5,NOBOX	-596,47611
chr7:143891899-143892191	chr7	+	143990570	143990772	False	NR_002158,NR_033942,NR_002157	chr7,chr7,chr7	+,-,+	OR2A20P,LOC728377,OR2A9P	5693,-7474,5841
chrX:19361318-19361725	chrX	+	19361340	19361716	True	NM_001173455,NM_001173454,NM_001173456,NM_000284,NM_001001671	chrX,chrX,chrX,chrX,chrX	+,+,+,+,-	PDHA1,PDHA1,PDHA1,PDHA1,MAP3K15	294,294,294,294,171713
chr1:242161814-242162076	chr1	+	242161905	242161993	True	NM_006027,NM_001004343	chr1,chr1	+,-	EXO1,MAP1LC3C	-149923,442
chr19:46141228-46141529	chr19	+	46141367	46141575	True	NR_029886,NM_012155,NM_001193268,NM_001193269,NM_000164,NR_034098	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,+,-	MIR330,EML2,EML2,EML2,GIPR,EML2	820,1150,7250,5460,29926,1150
chr6:87833712-87834939	chr6	+	87834166	87834918	True	NM_000735,NM_015021	chr6,chr6	-,+	CGA,ZNF292	-29342,30350
chr4:152631071-152633041	chr4	+	152631527	152633077	True	NM_004564,NM_001109977	chr4,chr4	-,+	PET112L,FAM160A1	49148,-301180
chrX:37709436-37711013	chrX	+	37709516	37710897	True	NM_000397,NM_006520	chrX,chrX	+,-	CYBB,DYNLT3	-70299,-2627
chr17:41797965-41798245	chr17	+	41798061	41798271	True	NM_025237,NM_001136483	chr17,chr17	-,+	SOST,C17orf105	37935,59531
chr17:43211191-43211698	chr17	+	43211205	43211396	True	NM_024722,NM_001135704,NM_001135707,NM_001135706,NM_001135705,NM_133373	chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,-	ACBD4,ACBD4,ACBD4,ACBD4,ACBD4,PLCD3	1617,-1290,1617,1617,1617,-1314
chr11:102326537-102326835	chr11	+	102326576	102326800	True	NM_001166,NM_052932	chr11,chr11	+,-	BIRC2,TMEM123	-108661,-2801
chr7:105223817-105224304	chr7	+	105223856	105223968	True	NR_027068,NM_021930	chr7,chr7	-,+	EFCAB10,RINT1	-1880,-51375
chr12:50148187-50149775	chr12	+	50148313	50149561	True	NM_001098576,NM_198900	chr12,chr12	+,-	TMBIM6,FMNL3	-12773,-47116
chr9:112889816-112890058	chr9	+	112889834	112890096	True	NM_001136562,NM_001012993	chr9,chr9	+,-	AKAP2,C9orf152	-2104,80367
chr5:176785258-176785520	chr5	+	176785266	176785536	True	NM_006816,NM_006480	chr5,chr5	-,+	LMAN2,RGS14	-6381,-473
chr15:90225453-90225981	chr15	+	90225805	90226001	True	NM_001145311,NM_003847,NM_020212,NM_002666	chr15,chr15,chr15,chr15	-,-,+,-	PLIN1,PEX11A,WDR93,PLIN1	-3157,8011,8026,-3157
chr18:60977684-60977972	chr18	+	60977692	60977888	True	NM_002639,NM_000657,NM_000633	chr18,chr18,chr18	+,-,-	SERPINB5,BCL2,BCL2	166255,8783,8783
chrX:46306979-46307444	chrX	+	46307041	46307385	True	NM_001039891,NM_001129898,NM_001129899,NM_001129900,NM_017776	chrX,chrX,chrX,chrX,chrX	-,+,+,+,+	ZNF674,ZNF673,ZNF673,ZNF673,ZNF673	97557,-468,-468,-468,-468
chr3:130116757-130117902	chr3	+	130116884	130117924	True	NR_024252,NR_022012	chr3,chr3	-,+	LOC729375,COL6A5	-286608,-52584
chrX:54558727-54559184	chrX	+	54558759	54559038	True	NM_004463,NM_019067,NM_001184819	chrX,chrX,chrX	-,+,+	FGD1,GNL3L,GNL3L	-36160,-2166,-2166
chr19:51303141-51303515	chr19	+	51303221	51303534	True	NR_003067,NR_003069,NR_003068,NM_033068,NM_199249,NM_199250	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,+,-,-	SNORD88A,SNORD88C,SNORD88B,ACPT,C19orf48,C19orf48	-429,2194,-839,-9600,4490,4488
chr6:28239009-28239912	chr6	+	28239009	28239904	True	NM_032507,NM_001111039,NM_019110,NM_001184743,NM_001023560,NM_152736	chr6,chr6,chr6,chr6,chr6,chr6	+,+,-,+,+,+	PGBD1,ZNF187,ZKSCAN4,PGBD1,ZNF187,ZNF187	9409,-4273,-19007,9409,-4273,-4273
chr11:118185743-118186205	chr11	+	118185793	118186151	True	NM_000733,NM_000732	chr11,chr11	+,-	CD3E,CD3D	-10559,27358
chr1:247071422-247071909	chr1	+	247071443	247071914	True	NR_015422,NM_015446	chr1,chr1	+,-	LOC149134,AHCTF1	-118588,22862
chr20:38896265-38896682	chr20	+	38896522	38896678	True	NM_003286,NM_005461	chr20,chr20	+,-	TOP1,MAFB	760783,421248
chr14:50859693-50860998	chr14	+	50859752	50860824	True	NR_033761,NM_004196	chr14,chr14	+,-	ATP5S,CDKL1	-80756,1856
chr15:66162519-66162763	chr15	+	66162578	66162798	True	NM_004663,NM_005848	chr15,chr15	+,-	RAB11A,DENND4A	-833,-77947
chr6:43030141-43030924	chr6	+	43030273	43030911	True	NM_015950,NM_001168370,NM_014780,NM_201521,NM_201523,NM_201522,NM_138343	chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,+,+,+,+	MRPL2,CUL7,CUL7,KLC4,KLC4,KLC4,KLC4	-3031,-8590,-8590,-2959,-2702,-2149,-2959
chr14:74816770-74817055	chr14	+	74816774	74817088	True	NR_003256,NM_018228	chr14,chr14	-,+	ABCD4,VRTN	-47007,-1659
chr20:60716410-60717644	chr20	+	60716617	60717621	True	NM_198935,NM_002792	chr20,chr20	+,-	SS18L1,PSMA7	1200,903
chr12:50673642-50674028	chr12	+	50673683	50673834	True	NM_016357,NM_001170804,NM_001113546	chr12,chr12,chr12	-,+,-	LIMA1,LARP4,LIMA1	3574,120757,3574
chr10:43951368-43952119	chr10	+	43951401	43952012	True	NR_026693,NM_001098204	chr10,chr10	+,-	ZNF487P,HNRNPF	-18878,-46705
chr7:140877878-140878592	chr7	+	140878079	140878623	True	NM_053035,NM_001195278	chr7,chr7	-,+	MRPS33,LOC100131199	-163298,-104107
chr12:54350292-54350575	chr12	+	54350306	54350534	True	NM_173860,NR_003716	chr12,chr12	+,-	HOXC12,HOTAIR	-1643,12031
chr17:42295642-42295860	chr17	+	42295670	42295796	True	NM_001076683,NM_001076684,NM_177441,NM_014233	chr17,chr17,chr17,chr17	-,-,+,-	UBTF,UBTF,TMUB2,UBTF	2504,1178,-31147,-6
chr7:149471553-149471765	chr7	+	149471594	149471802	True	NM_207336,NM_198455	chr7,chr7	-,+	ZNF467,SSPO	-1299,1328
chr4:39528867-39529067	chr4	+	39528911	39529097	True	NR_026854,NM_001184701,NM_001184700,NM_003359	chr4,chr4,chr4,chr4	+,-,-,-	LOC401127,UGDH,UGDH,UGDH	-47087,171,171,171
chr14:78871965-78872694	chr14	+	78872026	78872674	True	NM_004796,NM_012245	chr14,chr14	+,-	NRXN3,SNW1	-1984,-644529
chr12:89743327-89744875	chr12	+	89743620	89744873	True	NR_028138,NM_022652,NM_001946	chr12,chr12,chr12	+,-,-	LOC338758,DUSP6,DUSP6	357858,1474,1474
chr19:36909662-36909911	chr19	+	36909663	36909921	True	NM_133466,NR_033748	chr19,chr19	-,+	ZFP82,LOC644189	-113,2517
chr7:27170243-27170613	chr7	+	27170283	27170647	True	NM_002141,NM_153631,NR_002795	chr7,chr7,chr7	-,-,+	HOXA4,HOXA3,HOXA11-AS1	92,-3644,54379
chr16:89938510-89938803	chr16	+	89938517	89938681	True	NM_001018112,NM_014972	chr16,chr16	-,+	FANCA,TCF25	-55452,1312
chr10:734494-734760	chr10	+	734520	734722	True	NR_027152,NM_014974	chr10,chr10	+,-	C10orf108,DIP2C	-38554,936
chr11:72355891-72356685	chr11	+	72356198	72356624	True	NM_033388,NR_026572,NM_001143839	chr11,chr11,chr11	+,-,-	ATG16L2,PDE2A,PDE2A	168826,-2711,-2694
chr2:222436699-222436974	chr2	+	222436902	222436968	True	NM_153038,NM_004438	chr2,chr2	+,-	CCDC140,EPHA4	725897,92
chr16:66608705-66610019	chr16	+	66608803	66609826	True	NM_181270,NM_181271,NM_181272,NM_181269,NM_181268,NM_181296,NM_001199317,NM_004614,NM_144673,NM_181283,NM_052999	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,+,+,-,+,+,+	CMTM1,CMTM1,CMTM1,CMTM1,CMTM1,CMTM1,CMTM2,TK2,CMTM2,CMTM1,CMTM1	-8567,-8567,-8567,-8567,-8511,-8567,3524,-24488,3524,-8567,-8511
chr6:84222306-84222588	chr6	+	84222429	84222643	True	NM_002395,NM_001170423,NM_153362	chr6,chr6,chr6	-,+,+	ME1,PRSS35,PRSS35	-81491,-286,-286
chr12:55346893-55347392	chr12	+	55346893	55347289	True	NM_001098815,NM_021191	chr12,chr12	-,+	KIAA0748,NEUROD4	28383,66439
chr3:125492782-125494486	chr3	+	125493179	125494185	True	NR_024250,NR_031687	chr3,chr3	+,-	LOC100125556,MIR548I1	141258,15272
chrX:30595781-30595983	chrX	+	30595790	30595984	True	NM_000167,NM_025159	chrX,chrX	+,-	GK,CXorf21	75491,99
chr18:46474506-46475049	chr18	+	46474603	46474977	True	NM_001190823,NM_001190822,NM_001190821,NM_005904,NM_014772	chr18,chr18,chr18,chr18,chr18	-,-,-,-,+	SMAD7,SMAD7,SMAD7,SMAD7,CTIF	-5426,776,2154,2154,-409228
chr7:86974257-86974739	chr7	+	86974315	86974609	True	NM_001143935,NM_021151,NR_026585,NR_015381	chr7,chr7,chr7,chr7	+,+,+,-	CROT,CROT,CROT,TP53TG1	341,341,341,249
chr4:103888565-103889893	chr4	+	103888645	103889288	True	NM_001008388,NM_001100874	chr4,chr4	+,-	CISD2,NHEDC1	-98566,51667
chr1:116519162-116519381	chr1	+	116519282	116519412	True	NM_018420,NM_005599	chr1,chr1	+,-	SLC22A15,NHLH2	-214,-135535
chr3:63800304-63801048	chr3	+	63800314	63801090	True	NR_026866,NM_025075	chr3,chr3	+,-	C3orf49,THOC7	3950,48557
chr16:10934720-10935053	chr16	+	10934728	10935056	True	NM_000246,NM_001079512	chr16,chr16	+,-	CIITA,FAM18A	35998,-22107
chr1:115300975-115302160	chr1	+	115300980	115302000	True	NM_007158,NM_001007553,NM_001130523,NM_003176	chr1,chr1,chr1,chr1	-,-,-,+	CSDE1,CSDE1,CSDE1,SYCP1	-356,-356,-309,95454
chr20:2821900-2822490	chr20	+	2821935	2822398	True	NM_080413,NM_022575,NM_022760	chr20,chr20,chr20	+,+,-	VPS16,VPS16,FAM113A	-613,-613,-603
chr12:96432901-96434195	chr12	+	96433242	96434210	True	NM_000895,NM_152435	chr12,chr12	-,+	LTA4H,AMDHD1	-3877,-96230
chr8:95492055-95492626	chr8	+	95492059	95492334	True	NM_001205262,NM_012415,NM_001034915	chr8,chr8,chr8	-,-,+	RAD54B,RAD54B,ESRP1	-4716,-4716,161029
chr12:57635501-57635741	chr12	+	57635513	57635758	True	NM_145064,NM_020142,NM_001166357	chr12,chr12,chr12	-,-,+	STAC3,NDUFA4L2,SHMT2	9261,-1038,-11421
chr6:45928399-45930061	chr6	+	45928468	45929701	True	NM_016929,NM_014936	chr6,chr6	-,+	CLIC5,ENPP4	53959,167999
chr17:39944456-39944721	chr17	+	39944469	39944529	True	NM_002230,NM_021991,NM_021939	chr17,chr17,chr17	-,-,+	JUP,JUP,FKBP10	-1505,-1505,24432
chr7:1204513-1205617	chr7	+	1204613	1205631	True	NM_182491,NM_001080461	chr7,chr7	-,+	ZFAND2A,UNCX	-4758,67022
chr2:31461529-31461775	chr2	+	31461655	31461747	True	NM_014600,NM_001145122	chr2,chr2	+,-	EHD3,CAPN14	-4826,-21244
chr17:64310287-64311756	chr17	+	64310359	64311221	True	NM_002737,NM_000042	chr17,chr17	+,-	PRKCA,APOH	-11484,-84803
chr17:48502387-48502927	chr17	+	48502404	48502928	True	NM_025149,NM_018509	chr17,chr17	+,-	ACSF2,LRRC59	590,-27490
chr5:41158815-41159173	chr5	+	41158819	41159217	True	NM_000587,NM_000065	chr5,chr5	+,-	C7,C6	-249284,54500
chr11:85780409-85780879	chr11	+	85780496	85780913	True	NM_001008660,NM_003797,NM_007166	chr11,chr11,chr11	-,+,-	PICALM,EED,PICALM	-388,174901,-388
chr17:56609635-56609838	chr17	+	56609767	56609879	True	NM_001198713,NM_002876,NM_004574,NM_080415,NM_080416,NR_037156,NR_037155	chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,-,-,-,-,-	SEPT4,RAD51C,SEPT4,SEPT4,SEPT4,SEPT4,SEPT4	8350,160083,-2989,-324,-324,-4393,-2989
chr2:31428722-31429129	chr2	+	31428807	31429115	True	NM_014600,NM_001145122	chr2,chr2	+,-	EHD3,CAPN14	27764,11346
chr1:46932813-46934084	chr1	+	46932849	46934100	True	NM_147192,NM_001097611	chr1,chr1	+,-	DMBX1,KNCN	38567,82837
chr11:60229883-60231770	chr11	+	60229907	60231807	True	NM_021950,NM_022349,NM_152866	chr11,chr11,chr11	+,-,+	MS4A1,MS4A6A,MS4A1	-6676,-279233,-6676
chr22:37544599-37545243	chr22	+	37544738	37545288	True	NM_000878,NM_024681	chr22,chr22	-,+	IL2RB,KCTD17	724,-97011
chr10:135208754-135209277	chr10	+	135209054	135209292	True	NM_138384,NM_004092	chr10,chr10	+,-	MTG1,ECHS1	-1484,-22146
chr6:135835243-135835584	chr6	+	135835246	135835628	True	NM_001134832,NR_026805	chr6,chr6	-,+	AHI1,NCRNA00271	-16343,-16365
chr20:1207381-1207644	chr20	+	1207437	1207510	True	NM_018354,NM_001136566	chr20,chr20	-,+	C20orf46,RAD21L1	-42320,-730
chr4:41958283-41958907	chr4	+	41958313	41958924	True	NM_018126,NM_001159547	chr4,chr4	+,-	TMEM33,BEND4	-21233,196033
chr17:34758207-34759189	chr17	+	34758257	34759223	True	NM_001123392,NM_004773	chr17,chr17	-,+	TBC1D3H,ZNHIT3	-1207,83249
chr17:34758207-34759189	chr17	-	36282627	36282756	False	NM_032258,NR_024178,NM_001123391	chr17,chr17,chr17	+,-,+	TBC1D3F,LOC284100,TBC1D3	1203,-38264,1203
chr17:34758207-34759189	chr17	+	34809306	34810278	False	NM_001001418,NM_004773,NM_001040282	chr17,chr17,chr17	-,+,-	TBC1D3C,ZNHIT3,TBC1D3G	-1215,32194,-1203
chr17:34758207-34759189	chr17	+	34505198	34505327	False	NM_001001417,NM_001001435	chr17,chr17	-,+	TBC1D3B,CCL4L1	-1210,33140
chr17:34758207-34759189	chr17	+	34593242	34593371	False	NM_001001435,NM_001001418	chr17,chr17	+,-	CCL4L1,TBC1D3C	46662,-1215
chr1:65612433-65613217	chr1	+	65612491	65613017	True	NM_203464,NM_001005353,NM_013410,NR_029516	chr1,chr1,chr1,chr1	+,+,+,-	AK4,AK4,AK4,MIR101-1	214,495,832,-88300
chr6:137144882-137145560	chr6	+	137145032	137145327	True	NM_000288,NM_005923	chr6,chr6	+,-	PEX7,MAP3K5	-1382,-31376
chr3:9933791-9934481	chr3	+	9934144	9934528	True	NM_153480,NM_153483,NM_001193380,NM_001199552,NM_032492	chr3,chr3,chr3,chr3,chr3	+,+,+,-,+	IL17RE,IL17RE,IL17RE,CIDEC,JAGN1	9983,9767,9983,-12206,-1928
chr3:52280773-52281081	chr3	+	52280799	52281043	True	NM_001122870,NM_007284,NM_144641	chr3,chr3,chr3	+,-,+	PPM1M,TWF2,PPM1M	-664,-7616,-1041
chr15:34659477-34659702	chr15	+	34659531	34659697	True	NM_175741,NM_153613	chr15,chr15	+,-	C15orf55,LPCAT4	-21516,-136
chr1:22978605-22978905	chr1	+	22978665	22978949	True	NM_000491,NR_036214,NM_001114101,NM_172369	chr1,chr1,chr1,chr1	+,-,+,+	C1QB,MIR4253,C1QC,C1QC	732,210820,-8605,-8605
chr10:135340052-135340443	chr10	+	135340052	135340463	True	NM_000773,NM_001143763	chr10,chr10	+,-	CYP2E1,SYCE1	403,38725
chr16:445012-446716	chr16	+	445341	446511	True	NM_005009,NM_021259,NM_020664	chr16,chr16,chr16	+,-,+	NME4,TMEM8A,DECR2	680,-13391,5346
chr6:99283371-99283992	chr6	+	99283558	99283846	True	NM_005604,NM_012160	chr6,chr6	+,-	POU3F2,FBXL4	-1029,112053
chr1:145433086-145433816	chr1	+	145433239	145433696	True	NM_006472,NM_032305	chr1,chr1	+,-	TXNIP,POLR3GL	4765,36741
chr22:43347574-43347952	chr22	+	43347642	43347940	True	NM_001184971,NM_007229,NM_001197	chr22,chr22,chr22	-,-,+	PACSIN2,PACSIN2,BIK	7997,-4595,158816
chr18:58038667-58038890	chr18	+	58038667	58038879	True	NM_005912,NM_021127	chr18,chr18	-,+	MC4R,PMAIP1	1172,-471542
chr10:126718410-126719777	chr10	+	126718411	126719395	True	NM_022802,NM_017580,NR_036178	chr10,chr10,chr10	-,+,-	CTBP2,ZRANB1,MIR4296	-1958,-87770,2094
chr19:49257827-49258218	chr19	+	49258039	49258124	True	NM_019113,NM_000148,NM_182575	chr19,chr19,chr19	+,-,-	FGF21,FUT1,IZUMO1	1219,574,-7873
chr8:22103071-22104049	chr8	+	22103121	22103550	True	NR_029714,NM_001722	chr8,chr8	-,+	MIR320A,POLR3D	-565,-554
chr22:36650831-36651165	chr22	+	36651130	36651212	True	NM_145637,NM_145343,NM_001136540,NM_001136541,NM_003661	chr22,chr22,chr22,chr22,chr22	-,+,+,+,+	APOL2,APOL1,APOL1,APOL1,APOL1	-15130,-2064,-2064,-2064,-2064
chr3:52829630-52830387	chr3	+	52829699	52830371	True	NM_003157,NM_002217	chr3,chr3	-,+	NEK4,ITIH3	-24734,-966
chr6:34545284-34547043	chr6	+	34545623	34546770	True	NM_001199583,NM_012391	chr6,chr6	+,-	PACSIN1,SPDEF	-63026,-21532
chr20:55964005-55964205	chr20	+	55964135	55964201	True	NM_183425,NM_001190472,NM_017495	chr20,chr20,chr20	+,-,+	RBM38,MTRNR2L3,RBM38	2261,-29257,2261
chr13:21477789-21478158	chr13	+	21477802	21478016	True	NM_022459,NM_138284	chr13,chr13	-,+	XPO4,IL17D	-889,-200371
chr17:64228666-64230303	chr17	+	64229291	64230345	True	NM_002737,NM_000042	chr17,chr17	+,-	PRKCA,APOH	68580,-3735
chr19:10214691-10215549	chr19	+	10214866	10215572	True	NM_002566,NM_031917,NM_001198690,NR_003688,NR_004381,NM_001040664,NM_020230	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+,+	P2RY11,ANGPTL6,PPAN-P2RY11,SNORD105B,SNORD105,PPAN-P2RY11,PPAN	6624,-1441,1326,4852,2754,1326,1326
chr2:170683409-170683910	chr2	+	170683609	170683959	True	NM_172070,NM_014168	chr2,chr2	+,-	UBR3,METTL5	58,-2256
chr2:226296439-226296731	chr2	+	226296458	226296612	True	NM_014689,NM_020864	chr2,chr2	-,+	DOCK10,KIAA1486	-389128,-30920
chr9:140772900-140773228	chr9	+	140772913	140773145	True	NM_032937,NM_000718	chr9,chr9	-,+	C9orf37,CACNA1B	-259605,-723
chr11:15721908-15723514	chr11	+	15721986	15723289	True	NM_001145819,NM_001042536	chr11,chr11	-,+	SOX6,INSC	701174,-585560
chr21:28339709-28339999	chr21	+	28339743	28339929	True	NR_024357,NM_007038	chr21,chr21	+,-	NCRNA00113,ADAMTS5	754768,-304
chr7:30635710-30636534	chr7	+	30635728	30636546	True	NM_001202482,NM_002047	chr7,chr7	-,+	CRHR2,GARS	85651,-1598
chr15:34386995-34388664	chr15	+	34387009	34388711	True	NM_152595,NM_020154	chr15,chr15	+,-	PGBD4,C15orf24	5562,5395
chr1:100219043-100220745	chr1	+	100219535	100220493	True	NR_037516,NM_001013660	chr1,chr1	+,-	MIR548AA1,FRRS1	-64983,10907
chr2:38301771-38302148	chr2	+	38301876	38302160	True	NR_027252,NM_000104	chr2,chr2	+,-	C2orf58,CYP1B1	56086,1213
chr6:90062863-90063091	chr6	+	90062872	90062934	True	NM_014942,NM_016021	chr6,chr6	+,-	ANKRD6,UBE2J1	79962,-253
chr1:26874778-26875342	chr1	+	26874878	26875371	True	NM_001006665,NR_031740,NM_173574	chr1,chr1,chr1	+,+,-	RPS6KA1,MIR1976,ZNF683	-2586,5661,-175612
chr12:118542617-118543274	chr12	+	118542789	118542933	True	NM_002567,NM_019086	chr12,chr12	+,-	PEBP1,VSIG10	30936,-979
chr2:100935095-100937092	chr2	+	100935932	100937107	True	NM_198461,NM_001011717	chr2,chr2	-,+	LONRF2,NMS	2144,149836
chr5:140773464-140773911	chr5	+	140773496	140773954	True	NM_018925,NM_018921,NM_003736,NM_032099,NM_032098,NM_032088,NM_032089,NM_005642,NM_014004	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,+,-,+	PCDHGB5,PCDHGA9,PCDHGB4,PCDHGB5,PCDHGB4,PCDHGA8,PCDHGA9,TAF7,PCDHGA8	3740,8565,-6102,3740,-6102,-2071,8565,-73145,-2071
chr18:21031292-21031846	chr18	+	21031598	21031674	True	NM_003831,NM_032933	chr18,chr18	+,-	RIOK3,C18orf45	1112,-13673
chr22:50606735-50607037	chr22	+	50606969	50607033	True	NR_027691,NM_052839,NM_001160300,NM_020461	chr22,chr22,chr22,chr22	+,+,+,-	PANX2,PANX2,PANX2,TUBGCP6	2126,2126,2126,76417
chr10:128208835-128209978	chr10	+	128208858	128209913	True	NM_001004298,NM_001380	chr10,chr10	-,+	C10orf90,DOCK1	156,384109
chr22:50946089-50946531	chr22	+	50946089	50946523	True	NM_014551,NM_033200,NM_001185011,NM_152299	chr22,chr22,chr22,chr22	+,-,+,+	NCAPH2,LMF2,NCAPH2,NCAPH2	121,34,121,121
chr5:10583059-10583360	chr5	+	10583058	10583108	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-18674,178329
chr17:78011105-78011928	chr17	+	78011136	78011956	True	NM_017950,NM_019020	chr17,chr17	+,-	CCDC40,TBC1D16	-754,-1489
chr2:217234930-217235909	chr2	+	217235129	217235879	True	NM_014140,NM_020814	chr2,chr2	+,-	SMARCAL1,MARCH4	41257,921
chr16:34406795-34407641	chr16	+	34406865	34407453	True	NR_027080,NR_002837	chr16,chr16	+,-	LOC283914,UBE2MP1	190333,-2103
chr17:73761771-73762335	chr17	+	73762082	73762332	True	NM_000154,NM_001080419	chr17,chr17	-,+	GALK1,UNK	-802,18348
chr7:20260627-20262377	chr7	+	20260633	20262395	True	NM_182762,NM_002214	chr7,chr7	-,+	MACC1,ITGB8	-3620,108329
chrX:118920197-118921673	chrX	+	118920314	118921549	True	NM_001000,NR_002584,NM_001105576	chrX,chrX,chrX	-,-,+	RPL39,SNORA69,ANKRD58	4111,-48,-27797
chr2:74779648-74780596	chr2	+	74779858	74780344	True	NM_001197260,NM_001381,NM_032603	chr2,chr2,chr2	+,+,-	DOK1,DOK1,LOXL3	-3763,1167,768
chr13:108918524-108918864	chr13	+	108918550	108918902	True	NM_006573,NM_001145645,NM_001098268	chr13,chr13,chr13	+,+,-	TNFSF13B,TNFSF13B,LIG4	3074,3074,-47834
chr17:58157279-58158470	chr17	+	58157385	58158513	True	NM_000717,NR_030732,NM_022070	chr17,chr17,chr17	+,-,-	CA4,LOC645638,HEATR6	68788,7373,-1093
chr5:177593452-177593996	chr5	+	177593474	177593921	True	NM_022762,NM_017838	chr5,chr5	+,-	RMND5B,NHP2	-35497,-12513
chrX:107022301-107023064	chrX	+	107022300	107022590	True	NM_198057,NM_012216	chrX,chrX	-,+	TSC22D3,MID2	-3283,46493
chr12:54669636-54671200	chr12	+	54669875	54670816	True	NM_002136,NM_012117,NM_031157,NR_002944	chr12,chr12,chr12,chr12	+,-,+,+	HNRNPA1,CBX5,HNRNPA1,HNRNPA1P10	3671,3158,3671,3716
chr11:122525078-122525905	chr11	+	122525098	122525953	True	NM_032873,NM_001098169	chr11,chr11	+,-	UBASH3B,BSX	444,326476
chr9:15423955-15425306	chr9	+	15424097	15425028	True	NM_021144,NM_001039697	chr9,chr9	-,+	PSIP1,SNAPC3	85309,-1373
chr3:99797639-99799120	chr3	+	99797842	99798930	True	NM_001167924,NM_182909	chr3,chr3	+,-	C3orf26,FILIP1L	34843,34473
chr1:19216115-19217470	chr1	+	19216133	19217268	True	NM_001161504,NM_001135254	chr1,chr1	-,+	ALDH4A1,PAX7	173,-258684
chr2:65282587-65282996	chr2	+	65282587	65282951	True	NM_004161,NM_015147	chr2,chr2	-,+	RAB1A,CEP68	74534,543
chr6:75916563-75916990	chr6	+	75916812	75916940	True	NM_004370,NM_080645,NM_001100409	chr6,chr6,chr6	-,-,+	COL12A1,COL12A1,SENP6	-1189,-1189,394681
chr2:224900190-224900517	chr2	+	224900392	224900554	True	NM_022915,NM_001136530,NM_006216,NM_001136528	chr2,chr2,chr2,chr2	+,-,-,-	MRPL44,SERPINE2,SERPINE2,SERPINE2	-78332,2853,3532,3532
chr2:239334846-239335222	chr2	+	239334954	239335152	True	NR_037809,NM_001040445	chr2,chr2	-,+	LOC151171,ASB1	129038,473
chr9:99776976-99777417	chr9	+	99777279	99777339	True	NM_001045477,NR_002894	chr9,chr9	+,-	FAM22G,HIATL2	-86044,-1417
chr9:99776976-99777417	chr9	-	97135398	97135532	False	NM_017561,NM_032558	chr9,chr9	-,+	FAM22F,HIATL1	-44472,1300
chr1:226953519-226955033	chr1	+	226953787	226954732	True	NM_002221,NM_000447	chr1,chr1	-,+	ITPKB,PSEN2	-26911,103540
chr12:123266204-123267375	chr12	+	123266743	123267356	True	NM_032554,NM_201435,NM_032573,NR_027918	chr12,chr12,chr12,chr12	-,+,+,+	GPR81,CCDC62,CCDC62,CCDC62	-51614,-7721,-7721,-7721
chrX:2668438-2669005	chrY	+	2618531	2618882	False	NR_003254,NM_003140	chrY,chrY	+,-	XGPY2,SRY	1454,36967
chrX:2668438-2669005	chrX	+	2668531	2668882	True	NM_001141919,NM_001141920,NR_003254,NR_037842,NM_175569	chrX,chrX,chrX,chrX,chrX	+,+,+,-,+	XG,XG,XGPY2,NCRNA00102,XG	1210,1210,1454,-135143,1210
chrX:44730560-44731656	chrX	+	44730563	44731499	True	NM_176819,NM_173794,NM_021140	chrX,chrX,chrX	-,-,+	CXorf36,FUNDC1,KDM6A	328699,-328342,923
chr1:66292448-66294019	chr1	+	66292517	66293843	True	NM_002600,NR_029516	chr1,chr1	+,-	PDE4B,MIR101-1	-33715,-768326
chr8:125379246-125379462	chr8	+	125379260	125379422	True	NM_017956,NM_194291	chr8,chr8	+,-	TRMT12,TMEM65	83625,5576
chr1:228598043-228598721	chr1	+	228598088	228598436	True	NM_001024940,NM_175055,NM_001134855,NM_145214,NM_016102	chr1,chr1,chr1,chr1,chr1	-,+,-,-,-	TRIM17,HIST3H2BB,TRIM17,TRIM11,TRIM17	6197,47371,6197,-3571,6197
chr12:111474960-111475168	chr12	+	111474996	111475204	True	NM_000432,NM_015267	chr12,chr12	-,+	MYL2,CUX2	-116592,-3219
chr22:46438618-46439793	chr22	+	46438665	46439650	True	NR_027034,NR_027036	chr22,chr22	+,-	LOC150381,LOC100271722	10075,1148
chr3:97494190-97495591	chr3	+	97494353	97495472	True	NM_001042533,NM_177976	chr3,chr3	-,+	MINA,ARL6	195809,-10809
chr3:134095500-134095847	chr3	+	134095578	134095832	True	NM_001042383,NM_016201	chr3,chr3	+,-	CEP63,AMOTL2	108742,-2172
chr9:85048504-85048750	chr9	+	85048615	85048793	True	NM_152573,NM_001001670	chr9,chr9	-,+	RASEF,FAM75D1	629300,-444979
chr15:41785029-41785426	chr15	+	41785044	41785322	True	NM_002220,NM_001135685	chr15,chr15	+,-	ITPKA,LTK	799,20813
chr4:13631930-13633248	chr4	+	13632392	13632785	True	NM_148894,NR_003132	chr4,chr4	-,+	BOD1L,HSP90AB2P	-3064,-297418
chr17:39551439-39551660	chr17	+	39551455	39551635	True	NM_002277,NM_030975	chr17,chr17	-,+	KRT31,KRTAP9-9	2259,-139870
chr17:39551439-39551660	chr17	+	39535605	39535743	False	NM_030975,NM_021013,NM_002279	chr17,chr17,chr17	+,-,-	KRTAP9-9,KRT34,KRT33B	-124020,2943,-9558
chr11:133402244-133402549	chr11	+	133402273	133402537	True	NR_027276,NM_001012393	chr11,chr11	+,-	LOC100128239,OPCML	499629,0
chr5:68615048-68615399	chr5	+	68615048	68615278	True	NM_176816,NM_133343	chr5,chr5	-,+	CCDC125,RAD17	1194,49845
chr20:36532898-36534551	chr20	+	36533073	36534417	True	NM_080607,NM_014657	chr20,chr20	+,-	VSTM2L,TTI1	-1626,127466
chrX:1388438-1388720	chrY	+	1338615	1338717	False	NM_172249,NM_001161529,NM_006140,NM_001161532,NM_022148,NM_172246,NM_172245,NR_027760,NM_001161531	chrY,chrY,chrY,chrY,chrY,chrY,chrY,chrY,chrY	+,+,+,+,-,+,+,+,+	CSF2RA,CSF2RA,CSF2RA,CSF2RA,CRLF2,CSF2RA,CSF2RA,CSF2RA,CSF2RA	-973,-973,-973,-973,-57085,-973,-973,-973,-973
chrX:1388438-1388720	chrX	+	1388615	1388717	True	NM_172249,NM_001161529,NM_006140,NM_001161532,NM_022148,NM_172246,NM_172245,NR_027760,NM_001161531	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,-,+,+,+,+	CSF2RA,CSF2RA,CSF2RA,CSF2RA,CRLF2,CSF2RA,CSF2RA,CSF2RA,CSF2RA	-973,-973,-973,-973,-57085,-973,-973,-973,-973
chr7:150323534-150325193	chr7	+	150323595	150325021	True	NM_024711,NM_015660,NR_024115	chr7,chr7,chr7	-,+,-	GIMAP6,GIMAP2,GIMAP6	4717,57772,4717
chr1:157668113-157669276	chr1	+	157668180	157669134	True	NM_018240,NM_052939	chr1,chr1	+,-	KIRREL,FCRL3	293928,1563
chr10:77164718-77164969	chr10	+	77164774	77164979	True	NM_032772,NR_024422,NR_024421	chr10,chr10,chr10	-,+,+	ZNF503,NCRNA00245,NCRNA00245	-3261,-1311,-3539
chr10:131762245-131762450	chr10	+	131762303	131762415	True	NM_001005463,NM_006541	chr10,chr10	-,+	EBF3,GLRX3	-212,172223
chr4:69328014-69329178	chr4_ctg9_hap1	+	158236	158799	False	NM_014058,NM_001076	chr4_ctg9_hap1,chr4_ctg9_hap1	+,-	TMPRSS11E,UGT2B15	-15209,90219
chr4:69328014-69329178	chr4	+	69328313	69328876	True	NM_014058,NM_001076	chr4,chr4	+,-	TMPRSS11E,UGT2B15	-15208,105421
chr20:633167-633505	chr20	+	633218	633431	True	NM_080725,NM_001042353	chr20,chr20	-,+	SRXN1,FAM110A	516,180924
chr16:14417561-14418167	chr16	+	14417626	14417883	True	NR_029854,NM_001134477	chr16,chr16	+,-	MIR365-1,PARN	-14542,306300
chr12:57082214-57083288	chr12	+	57082287	57083067	True	NM_003725,NM_006601	chr12,chr12	+,-	HSD17B6,PTGES3	74040,-209
chr11:66028034-66029542	chr11	+	66028584	66029436	True	NM_001134776,NM_001134775,NM_001134774,NM_022822,NM_020470,NM_030981	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,-,+	KLC2,KLC2,KLC2,KLC2,YIF1A,RAB1B	-3544,-3870,-3461,-3461,27252,6619
chr8:8862288-8862919	chr8	+	8862543	8862971	True	NM_153332,NM_004225	chr8,chr8	+,-	ERI1,MFHAS1	-2287,-111412
chr17:48173552-48174666	chr17	+	48173722	48174256	True	NM_001199899,NM_001199898,NM_174920,NM_002611,NM_001199900	chr17,chr17,chr17,chr17,chr17	+,+,-,+,+	PDK2,PDK2,SAMD14,PDK2,PDK2	-714,-1672,32961,-1134,-1134
chr11:73467167-73468379	chr11	+	73467519	73468130	True	NM_198896,NM_016055,NM_002869	chr11,chr11,chr11	-,+,-	RAB6A,MRPL48,RAB6A	4138,30786,4138
chr4:1905620-1906577	chr4	+	1905770	1906584	True	NM_012318,NM_133334	chr4,chr4	-,+	LETM1,WHSC1	-47796,-3479
chr5:135530113-135531735	chr5	+	135530117	135531649	True	NR_024418,NM_001001419	chr5,chr5	-,+	LOC389332,SMAD5	-1266,-61632
chr12:120807905-120808566	chr12	+	120808063	120808607	True	NM_004373,NM_002442	chr12,chr12	+,-	COX6A1,MSI1	67296,-1105
chr16:4984425-4984913	chr16	+	4984462	4984822	True	NM_014692,NM_002705	chr16,chr16	+,-	SEC14L5,PPL	23495,2364
chr17:7821013-7821442	chr17	+	7821031	7821268	True	NR_003000,NR_024349	chr17,chr17	+,-	SCARNA21,LOC284023	-11642,-1766
chr14:24975398-24975916	chr14	+	24975498	24975826	True	NM_015299,NM_001836	chr14,chr14	+,-	KHNYN,CMA1	-76408,1695
chr11:74864025-74864326	chr11	+	74864113	74864347	True	NM_001005285,NM_001145212,NM_007256,NM_001145211	chr11,chr11,chr11,chr11	-,+,+,+	OR2AT4,SLCO2B1,SLCO2B1,SLCO2B1	-63355,-2132,-2132,6496
chr19:49542207-49543506	chr19	+	49542242	49543372	True	NR_024244,NM_033378,NR_004383,NM_033377,NM_033043,NM_033183	chr19,chr19,chr19,chr19,chr19,chr19	-,+,+,-,+,-	SNAR-G2,CGB2,SNAR-G1,CGB1,CGB5,CGB8	-7198,-7163,-2016,-2051,3729,9046
chr19:49542207-49543506	chr19	-	49531962	49532019	False	NR_004383,NR_024244,NM_033378,NM_033377,NM_000737	chr19,chr19,chr19,chr19,chr19	+,-,+,-,-	SNAR-G1,SNAR-G2,CGB2,CGB1,CGB	8257,3082,3110,8229,-4369
chr19:18063311-18063615	chr19	+	18063588	18063652	True	NM_002248,NM_000215	chr19,chr19	+,-	KCNN1,JAK3	-1528,-104747
chr15:75663968-75665641	chr15	+	75664115	75665541	True	NM_006715,NM_024608	chr15,chr15	-,+	MAN2C1,NEIL1	-3174,-24835
chrX:71528524-71528804	chrX	+	71528600	71528781	True	NM_004143,NM_001170747,NM_001144885,NM_001144886,NM_001144887	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	CITED1,PIN4,CITED1,CITED1,CITED1	-1763,-127125,-2836,-1563,-2836
chr15:72977854-72978192	chr15	+	72977868	72978200	True	NR_002780,NM_033028	chr15,chr15	-,+	HIGD2B,BBS4	340,325
chr16:67511697-67512075	chr16	+	67511894	67512121	True	NM_004691,NM_001138,NM_000196	chr16,chr16,chr16	-,-,+	ATP6V0D1,AGRP,HSD11B2	3018,5645,-46911
chr3:99978542-99979068	chr3	+	99978550	99979048	True	NM_018309,NM_014820,NM_001199198	chr3,chr3,chr3	+,-,+	TBC1D23,TOMM70A,TBC1D23	637,141227,637
chr2:55635524-55636798	chr2	+	55635981	55636774	True	NM_080667,NM_001135597	chr2,chr2	+,-	CCDC104,CCDC88A	109965,10346
chr8:67524899-67525132	chr8	+	67525043	67525103	True	NM_019607,NM_001080416,NM_001144755	chr8,chr8,chr8	+,-,-	C8orf44,MYBL1,MYBL1	54683,427,427
chr20:62585768-62586047	chr20	+	62585843	62586047	True	NM_017859,NM_001193379,NR_027287	chr20,chr20,chr20	-,-,+	UCKL1,UCKL1,UCKL1-AS1	1803,-3316,-1157
chr11:71956181-71956924	chr11	+	71956293	71956781	True	NM_005169,NM_001567	chr11,chr11	-,+	PHOX2A,INPPL1	-1073,-20462
chr3:12523913-12524729	chr3	+	12524183	12524591	True	NM_001195279,NM_025265,NM_001145393,NM_001145392,NM_001145395,NM_001145394	chr3,chr3,chr3,chr3,chr3,chr3	-,+,+,+,+,+	LOC100129480,TSEN2,TSEN2,TSEN2,TSEN2,TSEN2	62422,1418,1339,1418,1418,1339
chrX:62654346-62656072	chrX	+	62654702	62656090	True	NM_001010888,NM_001012968	chrX,chrX	+,-	ZC3H12B,SPIN4	2052524,-83484
chr20:55176717-55177710	chr20	+	55176777	55177583	True	NM_080615,NM_003222	chr20,chr20	-,+	GCNT7,TFAP2C	-75796,26774
chrY:24456190-24456405	chrY	+	24456321	24456387	True	NR_001541,NR_002193,NM_152585	chrY,chrY,chrY	-,+,+	TTTY5,RBMY2FP,RBMY1F	-11298,-1367,-1363
chr7:77045903-77046749	chr7	+	77046028	77046734	True	NM_002835,NM_017439	chr7,chr7	+,-	PTPN12,PION	120038,-311
chrX:148572882-148574070	chrX	+	148572892	148574106	True	NM_001171907,NM_000202	chrX,chrX	+,-	CXorf40A,IDS	48412,12828
chr1:1293442-1294035	chr1	+	1293647	1294011	True	NM_152228,NM_004421,NM_032348	chr1,chr1,chr1	+,-,-	TAS1R3,DVL1,MXRA8	-26972,-9155,14
chr19:2237432-2238181	chr19	+	2237635	2237961	True	NR_031596,NM_007165,NM_018049	chr19,chr19,chr19	-,+,-	MIR1227,SF3A2,PLEKHJ1	-3487,-870,-1307
chr4:3249973-3250220	chr4	+	3250053	3250259	True	NM_001042690,NM_002337	chr4,chr4	+,-	C4orf44,LRPAP1	507,284015
chr8:37373594-37374019	chr8	+	37373726	37373915	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	179385,231700
chrX:129115135-129115847	chrX	+	129115348	129115685	True	NM_021946,NM_001421	chrX,chrX	+,-	BCORL1,ELF4	23478,128840
chr3:13522576-13522858	chr3	+	13522717	13522827	True	NM_001136041,NM_024827,NM_024923	chr3,chr3,chr3	+,+,-	HDAC11,HDAC11,NUP210	-924,-1053,-60908
chr1:151689635-151690536	chr1	+	151689693	151690453	True	NM_001144956,NM_001172649,NM_007185,NM_001172648	chr1,chr1,chr1,chr1	+,-,-,-	RIIAD1,CELF3,CELF3,CELF3	3559,-811,-403,-901
chr2:98351254-98351510	chr2	+	98351302	98351554	True	NM_005735,NM_207519	chr2,chr2	-,+	ACTR1B,ZAP70	-70741,-484
chr20:32393968-32395008	chr20	+	32394104	32394536	True	NM_176812,NM_183397	chr20,chr20	+,-	CHMP4B,PXMP4	4573,-85968
chr19:14956888-14958413	chr19	+	14957063	14958259	True	NM_001005190,NM_012377	chr19,chr19	-,+	OR7A10,OR7C2	-4374,94041
chr12:124118843-124119974	chr12	+	124119037	124119738	True	NM_001414,NM_001516	chr12,chr12	-,+	EIF2B1,GTF2H3	-714,-714
chr19:19779971-19780393	chr19	+	19780112	19780292	True	NM_020410,NM_033204	chr19,chr19	-,+	ATP13A1,ZNF101	-5609,-500
chr10:3110313-3110541	chr10	+	3110313	3110577	True	NM_002627,NM_014889	chr10,chr10	+,-	PFKP,PITRM1	-612,104476
chr3:49592382-49593790	chr3	+	49592808	49593762	True	NM_032316,NM_003458	chr3,chr3	-,+	NICN1,BSN	-126051,-939
chr10:75635299-75635549	chr10	+	75635476	75635598	True	NM_001222,NM_172171,NM_172170,NM_172173,NM_001204492,NM_001145031,NM_172169	chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,-,+,-	CAMK2G,CAMK2G,CAMK2G,CAMK2G,CAMK2G,PLAU,CAMK2G	-1127,-1127,-1127,-1127,-1127,35263,-1127
chr17:27224198-27224421	chr17	+	27224346	27224406	True	NM_144683,NM_005702,NM_004475	chr17,chr17,chr17	-,+,-	DHRS13,ERAL1,FLOT2	5733,-42354,359
chr12:6874011-6874883	chr12	+	6874090	6874824	True	NM_002286,NR_026581,NM_002824	chr12,chr12,chr12	+,-,+	LAG3,MLF2,PTMS	6845,-11454,716
chr12:8340721-8341831	chr12	+	8341064	8341880	True	NM_018088,NR_026788	chr12,chr12	-,+	FAM90A1,FAM66C	38384,-8310
chr22:43546376-43547136	chr22	+	43546529	43547125	True	NM_007311,NM_014507,NM_173467,NM_000714	chr22,chr22,chr22,chr22	+,-,-,+	TSPO,MCAT,MCAT,TSPO	409,-7126,-7126,409
chr5:148651837-148652356	chr5	+	148651882	148652242	True	NM_001146337,NM_152406,NM_014443	chr5,chr5,chr5	+,+,-	AFAP1L1,AFAP1L1,IL17B	-532,-532,106646
chr3:129689126-129690117	chr3	+	129689434	129690076	True	NM_001128224,NM_007117	chr3,chr3	-,+	TMCC1,TRH	-77015,3037
chr6:138429190-138430332	chr6	+	138429244	138430380	True	NM_022121,NM_020340	chr6,chr6	-,+	PERP,KIAA1244	-584,52672
chr7:29243005-29244299	chr7	+	29243262	29244296	True	NM_004067,NM_031311	chr7,chr7	+,-	CHN2,CPVL	-9193,-57109
chr7:75411565-75412340	chr7	+	75411640	75412290	True	NM_001040456,NM_006072	chr7,chr7	+,-	RHBDD2,CCL26	96026,6824
chr19:2901808-2902296	chr19	+	2901811	2902333	True	NM_021217,NM_173480	chr19,chr19	-,+	ZNF77,ZNF57	42686,-966
chr9:99146129-99146447	chr9	+	99146167	99146446	True	NM_007001,NM_014282	chr9,chr9	-,+	SLC35D2,HABP4	-175,65967
chr6:43613074-43613331	chr6	+	43613150	43613380	True	NM_014628,NM_152732,NM_019096,NM_001193341	chr6,chr6,chr6,chr6	+,+,-,+	MAD2L1BP,RSPH9,GTPBP2,RSPH9	-9624,-434,-16214,-434
chr3:1145042-1145549	chr3	+	1145090	1145534	True	NM_000564,NM_014461	chr3,chr3	-,+	IL5RA,CNTN6	2006584,-10512
chr19:6527794-6528045	chr19	+	6527798	6528077	True	NM_003811,NM_006087	chr19,chr19	+,-	TNFSF9,TUBB4	2932,-25468
chrX:103268208-103268577	chrX	+	103268223	103268621	True	NM_001002916,NM_001164416	chrX,chrX	-,+	H2BFWT,H2BFM	3,25894
chr11:65688855-65689108	chr11	+	65688861	65689072	True	NM_031450,NM_001135635,NM_006442	chr11,chr11,chr11	-,-,+	C11orf68,C11orf68,DRAP1	-2330,-2330,-2184
chr4:78783578-78783789	chr4	+	78783633	78783805	True	NM_020236,NM_144571	chr4,chr4	+,-	MRPL1,CNOT6L	-1,-43089
chr16:69421367-69421847	chr16	+	69421383	69421762	True	NM_030579,NM_005652	chr16,chr16	+,-	CYB5B,TERF2	36735,-1509
chr9:84546300-84547431	chr9	+	84546404	84547470	True	NM_001145197,NM_005077	chr9,chr9	+,-	FAM75D4,TLE1	-3120,-242808
chr9:84546300-84547431	chr9	+	84561496	84562373	False	NM_005077,NM_207416	chr9,chr9	-,+	TLE1,FAM75D3	-257900,-3140
chr10:45475608-45477141	chr10	+	45475720	45477055	True	NM_007021,NM_006963	chr10,chr10	-,+	C10orf10,ZNF22	-1390,19217
chr3:39851764-39851986	chr3	+	39851800	39852034	True	NR_033965,NM_015460	chr3,chr3	-,+	FLJ33065,MYRIP	499205,-548
chr10:70844806-70845895	chr10	+	70844903	70845912	True	NM_001057,NR_036430,NM_002727	chr10,chr10,chr10	-,+,+	TACR2,SRGN,SRGN	330812,1915,1915
chr1:10053628-10054259	chr1	+	10053729	10053977	True	NM_032368,NM_052960	chr1,chr1	-,+	LZIC,RBP7	-50903,3277
chr19:47550189-47550818	chr19	+	47550605	47550845	True	NM_002517,NM_017854	chr19,chr19	+,-	NPAS1,TMEM160	-26513,1087
chr1:85730902-85732870	chr1	+	85731101	85732909	True	NM_003921,NR_024113,NM_145172,NM_198077	chr1,chr1,chr1,chr1	-,-,+,-	BCL10,C1orf52,WDR63,C1orf52	9735,-5746,-203168,-5746
chr2:87017462-87017778	chr2	+	87017467	87017797	True	NM_022780,NM_001768,NR_027353,NM_171827	chr2,chr2,chr2,chr2	+,-,-,-	RMND5A,CD8A,CD8A,CD8A	-70104,1090,1090,1090
chr7:915904-916143	chr7	+	915903	916015	True	NM_015949,NM_006869	chr7,chr7	+,-	GET4,ADAP1	175,78324
chrX:119754586-119755204	chrX	+	119754605	119754853	True	NM_152692,NM_001137554,NM_001011551	chrX,chrX,chrX	-,+,-	C1GALT1C1,MCTS1,C1GALT1C1	9202,-16105,9202
chrX:138286143-138286512	chrX	+	138286186	138286334	True	NR_028597,NM_001139501,NM_001139500,NM_001139498	chrX,chrX,chrX,chrX	+,-,-,-	SRD5A1P1,FGF13,FGF13,FGF13	242643,901,901,901
chr20:56099738-56099996	chr20	+	56099776	56099906	True	NM_002591,NM_080618	chr20,chr20	+,-	PCK1,CTCFL	36230,298
chr11:134284560-134284804	chr11	+	134284666	134284844	True	NM_018644,NR_033852	chr11,chr11	-,+	B3GAT1,LOC283177	-2854,21531
chr6:44307270-44307487	chr6	+	44307279	44307535	True	NM_145026,NM_020745	chr6,chr6	+,-	SPATS1,AARS2	2861,-26216
chr17:902753-903833	chr17	+	902802	903853	True	NM_013337,NM_022463	chr17,chr17	+,-	TIMM22,NXN	-2496,-19792
chrX:107332985-107333460	chrX	+	107333099	107333481	True	NM_052936,NM_178270,NM_002814,NM_170750	chrX,chrX,chrX,chrX	+,+,-,-	ATG4A,ATG4A,PSMD10,PSMD10	1417,1417,1449,1449
chr10:5703104-5703963	chr10	+	5703217	5703894	True	NM_024701,NR_024581,NM_017782,NR_037164	chr10,chr10,chr10,chr10	-,-,+,-	ASB13,ASB13,C10orf18,ASB13	4714,4714,22906,4714
chr9:45727302-45727745	chr9	+	45727692	45727794	True	NM_001145196,NR_024060	chr9,chr9	-,+	FAM75A6,FAM27A	-2096962,-714
chr9:45727302-45727745	chr9	+	44990947	44991003	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-762,-1360217
chr9:45727302-45727745	chr9	-	67793417	67793473	False	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	766,133287
chr6:17706854-17707328	chr6	+	17706882	17707312	True	NM_005124,NM_016255	chr6,chr6	-,+	NUP153,FAM8A1	-64,-106415
chr1:32676356-32676931	chr1	+	32676649	32676881	True	NM_001160042,NM_018134,NM_001099434,NM_019118	chr1,chr1,chr1,chr1	+,+,+,-	IQCC,IQCC,DCDC2B,TMEM234	-5464,-5464,-2005,11095
chr11:62600020-62600278	chr11	+	62600139	62600223	True	NM_003164,NM_018093,NM_001012662	chr11,chr11,chr11	-,-,+	STX5,WDR74,SLC3A2	-579,7455,23260
chr15:90358929-90359942	chr15	+	90358963	90359905	True	NM_001039958,NM_001150	chr15,chr15	+,-	MESP2,ANPEP	-39425,-891
chr6:167535437-167536225	chr6	+	167535691	167536273	True	NM_005299,NM_031409	chr6,chr6	-,+	GPR31,CCR6	35096,-33
chr20:61001507-61001787	chr20	+	61001524	61001758	True	NM_001024,NM_080833	chr20,chr20	+,-	RPS21,C20orf151	-39454,921
chr6:74368240-74368600	chr6	+	74368239	74368453	True	NM_001159587,NM_012434	chr6,chr6	+,-	CD109,SLC17A5	37054,-4502
chr10:5724722-5726697	chr10	+	5724891	5726421	True	NM_017782,NR_037164	chr10,chr10	+,-	C10orf18,ASB13	379,-16333
chr12:121351310-121352072	chr12	+	121351613	121351849	True	NM_139015,NM_000545	chr12,chr12	-,+	SPPL3,HNF1A	-9462,64699
chr11:94822949-94823153	chr11	+	94822969	94823201	True	NM_015036,NM_016403	chr11,chr11	+,-	ENDOD1,CWC15	-46,-116193
chr10:18687920-18689820	chr10	+	18687954	18689700	True	NM_201570,NM_182543	chr10,chr10	+,-	CACNB2,NSUN6	148,250909
chr16:75255658-75256327	chr16	+	75256076	75256372	True	NM_001025200,NM_001906	chr16,chr16	-,+	CTRB2,CTRB1	-15004,-3245
chr3:46617943-46618281	chr3	+	46617996	46618322	True	NM_003212,NM_024512,NM_001174136	chr3,chr3,chr3	+,-,+	TDGF1,LRRC2,TDGF1	753,-9985,-2003
chr3:121468806-121469178	chr3	+	121468907	121469226	True	NM_004487,NM_018456	chr3,chr3	-,+	GOLGB1,EAF2	-305,84807
chr4:56216410-56217330	chr4	+	56216579	56216930	True	NR_037969,NM_024592	chr4,chr4	-,+	LOC100506462,SRD5A3	34874,-4252
chr16:29674071-29674634	chr16	+	29674161	29674659	True	NR_002593,NM_001030288,NM_003123	chr16,chr16,chr16	-,+,+	SLC7A5P1,SPN,SPN	-49123,0,-80
chr1:27320624-27320872	chr1	+	27320631	27320801	True	NM_052943,NM_001013642	chr1,chr1	-,+	FAM46B,TRNP1	18582,-487
chr6:150685910-150686154	chr6	+	150686046	150686124	True	NM_001164695,NM_001164694,NM_203395,NM_024518	chr6,chr6,chr6,chr6	+,+,+,-	IYD,IYD,IYD,ULBP3	3903,3903,3903,-295844
chr5:145316179-145317058	chr5	+	145316317	145316955	True	NM_152550,NM_001080516	chr5,chr5	+,-	SH3RF2,GRXCR2	-242,-63786
chr1:48566454-48568040	chr1	+	48566461	48568062	True	NR_026749,NM_001011547	chr1,chr1	-,+	SKINTL,SLC5A9	80088,120294
chr14:77888662-77889286	chr14	+	77888733	77889285	True	NM_012111,NM_001113475,NM_138791	chr14,chr14,chr14	+,-,-	AHSA1,C14orf148,C14orf148	35087,144,-3
chr15:84115466-84115776	chr15	+	84115467	84115801	True	NM_003027,NM_001717,NR_026799	chr15,chr15,chr15	+,-,+	SH3GL3,BNC1,SH3GL3	289,-161999,289
chr5:42804485-42805575	chr5	+	42804913	42805590	True	NM_001093726,NM_005410,NM_001085486,NM_001134848	chr5,chr5,chr5,chr5	-,-,-,+	SEPP1,SEPP1,SEPP1,CCDC152	6487,6487,6487,-48055
chr9:138453423-138453695	chr9	+	138453422	138453710	True	NM_144654,NM_002571,NM_001018049	chr9,chr9,chr9	-,+,+	C9orf116,PAEP,PAEP	-61661,53,53
chr1:37501836-37502664	chr1	+	37501955	37502635	True	NR_036217,NM_000831	chr1,chr1	+,-	MIR4255,GRIK3	124528,-2111
chr2:65285731-65287583	chr2	+	65286061	65287538	True	NM_004161,NM_015147	chr2,chr2	-,+	RAB1A,CEP68	69954,-2624
chr5:124180583-124181368	chr5	+	124180910	124181376	True	NM_004384,NM_020747	chr5,chr5	+,-	CSNK1G3,ZNF608	-1333178,-100105
chr1:12978049-12978263	chr1	+	12978094	12978264	True	NM_001012277,NM_001012276,NM_001039361	chr1,chr1,chr1	+,+,-	PRAMEF7,PRAMEF8,PRAMEF10	-632,-1695,-20000
chr1:12978049-12978263	chr1	-	13388950	13389120	False	NM_001012276,NM_001010889	chr1,chr1	-,+	PRAMEF8,PRAMEF6	1695,-29168
chr1:12978049-12978263	chr1	-	13609735	13609905	False	NM_001012277,NM_001012276,NM_001098376	chr1,chr1,chr1	-,-,+	PRAMEF7,PRAMEF8,PRAMEF15	632,1695,32067
chr16:85642328-85642607	chr16	+	85642338	85642646	True	NM_001134473,NM_014615,NM_016095	chr16,chr16,chr16	+,+,-	KIAA0182,KIAA0182,GINS2	2382,4277,79992
chr10:115515389-115516766	chr10	+	115515478	115516622	True	NM_001193435,NM_001193434,NM_198060,NM_024889,NM_182601	chr10,chr10,chr10,chr10,chr10	+,+,-,+,+	C10orf81,C10orf81,NRAP,C10orf81,C10orf81	-4318,-4318,-91673,-4318,7955
chr17:75471489-75471767	chr17	+	75471490	75471766	True	NM_001113495,NR_036200	chr17,chr17	+,-	SEPT9,MIR4316	-216,-78354
chr8:109094030-109094250	chr8	+	109094112	109094289	True	NM_178565,NM_014673	chr8,chr8	-,+	RSPO2,TTC35	1674,361563
chr1:155021604-155022049	chr1	+	155021609	155022104	True	NM_144622,NM_207191,NM_207196,NM_207197,NM_207194,NM_207195,NM_003815	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,+,+,+,+	DCST2,ADAM15,ADAM15,ADAM15,ADAM15,ADAM15,ADAM15	-15352,1657,1657,1657,1657,1657,1657
chr2:171908692-171909963	chr2	+	171908829	171909679	True	NM_015530,NM_001136555	chr2,chr2	+,-	GORASP2,TLK1	-123853,13868
chr5:34192612-34192989	chr5	+	34192615	34193033	True	NM_016568,NR_037951	chr5,chr5	+,-	RXFP3,C1QTNF3-AMACR	-256175,-67982
chr5:34192612-34192989	chr5	+	34192155	34192217	False	NM_016568,NR_037951	chr5,chr5	+,-	RXFP3,C1QTNF3-AMACR	-255715,-67522
chr5:176515781-176517055	chr5	+	176515792	176517054	True	NM_213647,NM_022963,NM_001199298,NM_002011	chr5,chr5,chr5,chr5	+,+,-,+	FGFR4,FGFR4,UIMC1,FGFR4	-1922,290,-81997,-1922
chr22:31032721-31032982	chr22	+	31032738	31032884	True	NM_001001479,NR_036550	chr22,chr22	+,-	SLC35E4,PES1	-996,-29738
chr7:99702878-99703120	chr7	+	99702883	99703079	True	NM_004722,NM_182776,NM_005916	chr7,chr7,chr7	+,-,-	AP4M1,MCM7,MCM7	-3804,-4503,-3456
chr1:117451996-117452286	chr1	+	117452048	117452332	True	NM_020440,NM_001145635	chr1,chr1	+,-	PTGFRN,TRIM45	356,212129
chr16:724664-725289	chr16	+	724735	725329	True	NM_001005920,NM_138769,NM_003961,NM_005861	chr16,chr16,chr16,chr16	-,+,+,+	JMJD8,RHOT2,RHBDL1,STUB1	9160,-6653,745,4785
chr13:28367520-28367945	chr13	+	28367519	28367865	True	NM_153371,NM_145657	chr13,chr13	-,+	LNX2,GSX1	-172799,-790
chr3:121315866-121316667	chr3	+	121315898	121316501	True	NM_199420,NM_016298	chr3,chr3	-,+	POLQ,FBXO40	-51045,-3779
chr4:49286425-49287018	chr4	+	49286531	49286763	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-298330,-377716
chr4:49286425-49287018	chr4	-	49327533	49327765	False	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-339327,-418718
chr2:119918047-119918262	chr2	+	119918050	119918250	True	NM_001008410,NM_182528	chr2,chr2	+,-	STEAP3,C1QL2	63133,-1579
chr13:114897451-114897652	chr13	+	114897450	114897628	True	NM_001078645	chr13	+	CDC16	102733
chr15:90932076-90933158	chr15	+	90932110	90932476	True	NR_028287,NM_003870	chr15,chr15	-,+	GABARAPL3,IQGAP1	-39431,-693
chrX:31489624-31491558	chrX	+	31489942	31491186	True	NM_203391,NM_004014	chrX,chrX	+,-	GK,DMD	-818528,35286
chr3:43662956-43663263	chr3	+	43662955	43663311	True	NM_016006,NM_001204832,NM_001204834,NM_001204831,NM_018075,NM_001204833	chr3,chr3,chr3,chr3,chr3,chr3	+,-,-,-,-,-	ABHD5,ANO10,ANO10,ANO10,ANO10,ANO10	69063,299,299,299,299,299
chr4:57684749-57685667	chr4	+	57684918	57685650	True	NM_021114,NM_005612	chr4,chr4	-,+	SPINK2,REST	2293,88391
chr3:169528024-169528568	chr3	+	169528065	169528573	True	NM_001080460,NM_001172779,NM_153353,NM_001172780	chr3,chr3,chr3,chr3	+,-,-,-	LRRIQ4,LRRC34,LRRC34,LRRC34	11136,2051,2051,2051
chr2:91961984-91963815	chr2	+	91962422	91963380	True	NR_003503,NR_027238	chr2,chr2	+,-	GGT8P,LOC654342	-11,-114447
chr9:135818479-135818982	chr9	+	135818479	135818933	True	NM_001135031,NM_001162426,NM_001162427,NM_000368	chr9,chr9,chr9,chr9	+,-,-,-	GFI1B,TSC1,TSC1,TSC1	35164,1137,1137,1137
chr3:57582431-57582685	chr3	+	57582506	57582618	True	NM_001660,NM_177966	chr3,chr3	-,+	ARF4,PDE12	647,-40578
chr12:121732201-121732895	chr12	+	121732209	121732668	True	NM_002560,NM_153500,NM_153499,NM_172214,NM_172215,NM_172216,NM_006549,NM_172226	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,-,-,-,-,-,-,-	P2RX4,CAMKK2,CAMKK2,CAMKK2,CAMKK2,CAMKK2,CAMKK2,CAMKK2	-84608,3508,3508,3508,3508,3508,3508,1953
chr16:31408753-31408977	chr16	+	31408757	31409009	True	NM_005353,NM_005205	chr16,chr16	+,-	ITGAD,COX6A2	-4175,30790
chrX:21393033-21393246	chrX	+	21393032	21393092	True	NM_001168647,NM_001168648,NM_001168649,NM_014927,NM_153270	chrX,chrX,chrX,chrX,chrX	+,+,+,+,-	CNKSR2,CNKSR2,CNKSR2,CNKSR2,KLHL34	-547,-547,-547,-547,283406
chr15:64790022-64791640	chr15	+	64790216	64791626	True	NM_015042,NM_014736	chr15,chr15	+,-	ZNF609,KIAA0101	-8,-116514
chr15:35590416-35590905	chr15	+	35590519	35590840	True	NR_003144,NR_037507	chr15,chr15	+,-	LOC723972,MIR3942	-61051,73775
chr2:115920017-115920219	chr2	+	115920024	115920250	True	NR_036580,NM_001178034,NM_001004360	chr2,chr2,chr2	-,+,+	LOC389023,DPP10,DPP10	-1104,-562,-391
chr2:88926031-88926313	chr2	+	88926036	88926258	True	NM_144563,NM_004836	chr2,chr2	+,-	RPIA,EIF2AK3	64917,886
chr19:51529243-51529450	chr19	+	51529243	51529405	True	NM_145894,NM_145895,NM_019598,NM_002776,NM_001136032,NM_145888,NM_001077500,NM_001167605,NM_006853,NM_144947,NM_014441	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,-,-,-,+	KLK12,KLK12,KLK12,KLK10,KLK11,KLK10,KLK10,KLK11,KLK11,KLK11,SIGLEC9	8793,8793,8793,-5961,517,-6289,-5812,1935,1935,1530,98731
chr16:83984190-83984816	chr16	+	83984716	83984780	True	NM_013370,NM_001080442,NM_182981,NM_182980	chr16,chr16,chr16,chr16	+,-,+,+	OSGIN1,SLC38A8,OSGIN1,OSGIN1	-2095,91032,2046,-2095
chr7:65005746-65006766	chr7	+	65005990	65006803	True	NM_000181,NR_027392	chr7,chr7	-,+	GUSB,INTS4L2	440551,105973
chr7:65005746-65006766	chr7	-	65125630	65126488	False	NM_000181,NR_027392	chr7,chr7	-,+	GUSB,INTS4L2	320872,-12952
chr7:65005746-65006766	chr7	-	64614475	64615298	False	NR_027393,NM_001007253	chr7,chr7	+,-	INTS4L1,ERV3	-12926,-147351
chr6:15074415-15074779	chr6	+	15074440	15074720	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	171806,588627
chr8:63981433-63982871	chr8	+	63981779	63982870	True	NR_027378,NM_000370	chr8,chr8	+,-	LOC643763,TTPA	-91421,15792
chr6:29793524-29795226	chr6	+	29794848	29794944	True	NM_002127,NR_002139	chr6,chr6	+,-	HLA-G,HCG4	-151,-33998
chr22:41599736-41599943	chr22	+	41599735	41599991	True	NM_138481,NM_031488	chr22,chr22	-,+	CHADL,L3MBTL2	36994,1321
chr11:65233457-65234100	chr11	+	65233525	65233959	True	NR_030343,NM_182556	chr11,chr11	+,-	MIR612,SLC25A45	-21647,-83383
chr8:144417524-144417846	chr8	+	144417561	144417895	True	NM_052963,NM_052924	chr8,chr8	-,+	TOP1MT,RHPN1	-511,33129
chr19:34017577-34017797	chr19	+	34017756	34017834	True	NM_001166057,NM_000285,NM_001166056,NM_001127895	chr19,chr19,chr19,chr19	-,-,-,+	PEPD,PEPD,PEPD,CHST8	-4957,-4957,-4957,95026
chr4:113207228-113207880	chr4	+	113207371	113207879	True	NM_001102406,NM_052864	chr4,chr4	+,-	ALPK1,TIFA	10619,-312
chr16:27212997-27213652	chr16	+	27213169	27213535	True	NM_024773,NM_145080,NM_001145348	chr16,chr16,chr16	+,-,+	JMJD5,NSMCE1,JMJD5	1271,66628,1760
chr19:52195082-52195497	chr19	+	52195285	52195515	True	NM_001523,NR_029843,NR_029482,NR_024330,NR_029693	chr19,chr19,chr19,chr19,chr19	-,+,+,+,+	HAS1,MIR99B,MIRLET7E,NCRNA00085,MIR125A	31756,349,523,1077,991
chr19:57743954-57744413	chr19	+	57744004	57744442	True	NM_001012729,NM_001145078,NM_001023563,NM_001015878,NM_001015879,NM_003160	chr19,chr19,chr19,chr19,chr19,chr19	-,+,+,+,+,+	DUXA,ZNF805,ZNF805,AURKC,AURKC,AURKC	-65148,7610,7610,-1627,-1678,-1678
chr17:79850154-79851127	chr17	+	79850349	79851033	True	NM_016476,NM_005782,NM_001002249,NM_001002248,NM_001002247,NM_001002246,NM_001002245,NM_001002244,NM_148896	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,-,+,+,+,+,+,+,+	ANAPC11,THOC4,ANAPC11,ANAPC11,ANAPC11,ANAPC11,ANAPC11,ANAPC11,NPB	-805,-887,-586,-805,-805,-805,-805,-805,9038
chr19:55974293-55975038	chr19	+	55974318	55975036	True	NM_024710,NM_033113,NM_001136202,NM_001136201	chr19,chr19,chr19,chr19	-,+,-,-	ISOC2,ZNF628,ISOC2,ISOC2	-1269,12662,-1269,-1269
chr12:110939863-110940085	chr12	+	110939904	110940092	True	NM_016226,NM_152442,NM_057180	chr12,chr12,chr12	-,+,-	VPS29,RAD9B,VPS29	12,-4,12
chr6:74171377-74171672	chr6	+	74171414	74171664	True	NM_001123226,NM_012123,NM_133645,NM_138441	chr6,chr6,chr6,chr6	+,+,+,-	MTO1,MTO1,MTO1,MB21D1	-11,-11,-11,-9371
chr8:22090277-22091288	chr8	+	22090342	22091278	True	NM_001722,NM_001099335,NM_014759	chr8,chr8,chr8	+,-,-	POLR3D,PHYHIP,PHYHIP	11340,-491,-491
chr20:15199379-15199614	chr20	+	15199379	15199448	True	NR_037841,NM_001033087	chr20,chr20	-,+	NCRNA00186,MACROD2	-289218,-21931
chr19:4342304-4342563	chr19	+	4342377	4342579	True	NM_001159846,NM_001013841,NM_032868,NM_017720	chr19,chr19,chr19,chr19	+,-,+,-	MPND,STAP2,MPND,STAP2	944,-3530,944,-3530
chrX:85304003-85305359	chrX	+	85304062	85305096	True	NM_001145414,NM_001139514,NM_000390	chrX,chrX,chrX	-,+,-	CHM,DACH2,CHM	-1496,98358,-1496
chr3:40498190-40498876	chr3	+	40498279	40498781	True	NR_033965,NM_001034996,NM_003973	chr3,chr3,chr3	-,+,+	FLJ33065,RPL14,RPL14	-147090,48,19
chr1:6846946-6847479	chr1	+	6847000	6847530	True	NM_001195563,NM_018198,NM_015215	chr1,chr1,chr1	+,-,+	CAMTA1,DNAJC11,CAMTA1	-1667,-85034,-1667
chr7:26331374-26331661	chr7	+	26331387	26331671	True	NM_031243,NM_013322,NM_001199835,NR_037670	chr7,chr7,chr7,chr7	-,+,+,+	HNRNPA2B1,SNX10,SNX10,SNX10	-90974,3,3,3
chr3:155524137-155524641	chr3	+	155524206	155524554	True	NM_003875,NM_173657	chr3,chr3	+,-	GMPS,C3orf33	63770,-151
chr10:97469643-97470016	chr10	+	97469809	97469891	True	NM_001143973,NM_001098175	chr10,chr10	-,+	TCTN3,ENTPD1	-15909,1644
chr7:48083974-48084541	chr7	+	48084220	48084576	True	NM_152782,NM_001100159	chr7,chr7	-,+	SUN3,C7orf57	-15504,-9154
chr12:52281935-52282458	chr12	+	52281954	52282388	True	NM_182608,NM_001130015,NM_001013690	chr12,chr12,chr12	+,+,-	ANKRD33,ANKRD33,FIGNL2	-212,-212,-56253
chr1:46944827-46945593	chr1	+	46944850	46945177	True	NM_147192,NM_001097611	chr1,chr1	+,-	DMBX1,KNCN	27490,71761
chr12:57915922-57916159	chr12	+	57915923	57916129	True	NM_004083,NM_052897,NM_001195053,NM_001195055,NM_001195054,NM_001195057,NM_001195056	chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,+,-,-,-,-,-	DDIT3,MBD6,DDIT3,DDIT3,DDIT3,DDIT3,DDIT3	-1623,529,-1623,-1623,-1623,-1623,-1623
chr5:22815733-22815934	chr5	+	22815917	22815986	True	NR_003921,NM_004061	chr5,chr5	+,-	PMCHL1,CDH12	-673512,37798
chrX:41958432-41958691	chrX	+	41958529	41958657	True	NM_003688,NM_080817	chrX,chrX	-,+	CASK,GPR82	-176242,-375172
chr15:65429418-65430901	chr15	+	65429579	65430505	True	NM_005707,NM_001101362	chr15,chr15	-,+	PDCD7,KBTBD13	-3405,-60476
chr8:144946875-144947154	chr8	+	144946984	144947100	True	NM_000837,NM_031308	chr8,chr8	+,-	GRINA,EPPK1	117125,384
chr11:417905-418652	chr11	+	417932	418574	True	NM_001135053,NM_007183,NM_001135054,NM_021805	chr11,chr11,chr11,chr11	-,+,-,-	SIGIRR,PKP3,SIGIRR,SIGIRR	-535,-23766,-2933,-535
chr21:46056496-46057054	chr21	+	46056550	46056890	True	NM_198698,NM_198690,NM_181688,NM_198692	chr21,chr21,chr21,chr21	-,+,+,+	KRTAP12-4,KRTAP10-9,KRTAP10-10,KRTAP10-11	17736,-9561,382,9440
chr21:46056496-46057054	chr21	-	45971934	45971984	False	NM_198696,NM_198687,NM_198693	chr21,chr21,chr21	-,+,-	KRTAP10-3,KRTAP10-4,KRTAP10-2	6709,21621,-546
chr3:43141945-43143715	chr3	+	43142186	43143618	True	NM_001129908,NM_032806	chr3,chr3	+,-	FAM198A,C3orf39	-121478,3997
chr19:49437908-49438700	chr19	+	49438001	49438571	True	NM_003323,NM_014475	chr19,chr19	-,+	TULP2,DHDH	-36005,-1114
chr3:193950172-193950531	chr3	+	193950187	193950429	True	NR_024480,NM_005524	chr3,chr3	-,+	LOC100131551,HES1	80214,-96315
chr9:115774564-115776077	chr9	+	115774573	115775546	True	NM_001101338,NR_024366	chr9,chr9	-,+	ZNF883,NCRNA00256A	-101,99629
chr17:62943819-62944699	chr17	+	62944163	62944630	True	NR_026903,NM_001165933	chr17,chr17	-,+	AMZ2P1,RGS9	27132,188825
chr4:129206371-129208302	chr4	+	129206667	129208217	True	NM_006320,NM_018078	chr4,chr4	-,+	PGRMC2,LARP1B	1819,-224226
chr1:229436562-229438451	chr1	+	229436854	229438443	True	NM_145257,NM_006542	chr1,chr1	-,+	C1orf96,SPHAR	40295,1685
chr5:137872191-137873367	chr5	+	137872276	137873152	True	NM_004730,NM_001964	chr5,chr5	-,+	ETF1,EGR1	5840,-71146
chr17:4465129-4467030	chr17	+	4465145	4466930	True	NM_198501,NM_001105538,NM_014520,NM_153338,NM_001122890	chr17,chr17,chr17,chr17,chr17	+,-,-,-,-	SMTNL2,MYBBP1A,MYBBP1A,GGT6,GGT6	20345,-6464,-6464,-1269,-1269
chr19:9731059-9731438	chr19	+	9731226	9731401	True	NM_001048241,NM_152289	chr19,chr19	+,-	UBL5,ZNF561	207166,574
chr7:86851725-86852010	chr7	+	86851773	86852063	True	NM_024315,NM_021145	chr7,chr7	-,+	C7orf23,DMTF1	-2742,-69954
chr1:40101042-40101457	chr1	+	40101044	40101464	True	NM_014571,NM_203456	chr1,chr1	-,+	HEYL,PPIE	3934,103052
chr16:69374509-69374908	chr16	+	69374514	69374952	True	NM_001199434,NM_032382,NM_016101	chr16,chr16,chr16	+,-,+	NIP7,COG8,NIP7	-1150,-988,-1150
chr19:47809347-47810695	chr19	+	47809390	47810436	True	NM_001736,NM_001127242	chr19,chr19	+,-	C5AR1,BBC3	2667,-73367
chr10:50116502-50117581	chr10	+	50116555	50117594	True	NM_020945,NM_001006939	chr10,chr10	+,-	WDFY4,LRRC18	-223101,4736
chr1:16537623-16538060	chr1	+	16537645	16537995	True	NM_153213,NM_001114600	chr1,chr1	-,+	ARHGEF19,C1orf144	1159,155587
chr7:131335619-131336358	chr7	+	131335899	131336235	True	NM_005397,NM_013255	chr7,chr7	-,+	PODXL,MKLN1	-94523,-323367
chr20:10200430-10201835	chr20	+	10200429	10201872	True	NM_130811,NM_018848,NM_003081	chr20,chr20,chr20	+,-,+	SNAP25,MKKS,SNAP25	-1005,210749,-1005
chr22:21214951-21216130	chr22	+	21214950	21215408	True	NM_004782,NM_058004	chr22,chr22	+,-	SNAP29,PI4KA	-1709,-1880
chr18:77723306-77723698	chr18	+	77723425	77723635	True	NM_001136180,NM_025078	chr18,chr18	+,-	HSBP1L1,PQLC1	946,-11772
chr10:95518974-95520444	chr10	+	95519302	95520488	True	NM_005097,NM_145246	chr10,chr10	+,-	LGI1,FRA10AC1	-1787,-56973
chr6:28476302-28476747	chr6	+	28476690	28476798	True	NM_182701,NM_001509	chr6,chr6	-,+	GPX6,GPX5	6830,16990
chr15:84748691-84748929	chr15	+	84748760	84748976	True	NR_027001,NR_036652	chr15,chr15	-,+	LOC388152,LOC648809	149994,8
chr3:141598475-141599900	chr3	+	141598915	141599722	True	NM_001679,NM_001178140	chr3,chr3	+,-	ATP1B3,TFDP2	-3506,119564
chr12:89903713-89905115	chr12	+	89903993	89904923	True	NM_003774,NR_028138	chr12,chr12	-,+	GALNT4,LOC338758	13718,197808
chr15:101836070-101836917	chr15	+	101836111	101836709	True	NM_024652,NM_003090	chr15,chr15	+,-	LRRK1,SNRPA1	-376702,-651
chr15:71147068-71147388	chr15	+	71147166	71147386	True	NM_018357,NM_001199017,NM_197958	chr15,chr15,chr15	-,+,-	LARP6,LRRC49,LARP6	-668,37541,-668
chr17:26881151-26881985	chr17	+	26881319	26882033	True	NM_054035,NM_005148,NM_003593	chr17,chr17,chr17	-,-,+	UNC119,UNC119,FOXN1	-1673,-1673,-30411
chr2:121004008-121005832	chr2	+	121004549	121005870	True	NM_002881,NR_000034	chr2,chr2	+,-	RALB,TMEM185B	4543,-23565
chr15:38857241-38857456	chr15	+	38857246	38857408	True	NM_005739,NM_173611,NM_001128602	chr15,chr15,chr15	-,+,-	RASGRP1,FAM98B,RASGRP1	-239,-110969,-239
chr17:25479892-25480581	chr17	+	25480044	25480614	True	NM_015626,NM_000625	chr17,chr17	+,-	WSB1,NOS2	140491,646991
chr1:36349562-36351135	chr1	+	36349922	36351078	True	NM_012199,NM_022111	chr1,chr1	+,-	EIF2C1,CLSPN	-1163,-114371
chr16:11923117-11923919	chr16	+	11923330	11923474	True	NR_024050,NM_001192,NR_024049	chr16,chr16,chr16	-,+,-	BCAR4,TNFRSF17,BCAR4	-641,135489,-641
chr6:46173476-46175384	chr6	+	46173810	46175376	True	NM_014936,NM_021572	chr6,chr6	+,-	ENPP4,ENPP5	-76160,-35093
chr16:56713150-56713769	chr16	+	56713245	56713785	True	NM_005952,NM_005950,NR_003669,NM_005951	chr16,chr16,chr16,chr16	+,-,+,+	MT1X,MT1G,MT1IP,MT1H	2596,-11268,-3647,-9570
chr7:1273939-1274372	chr7	+	1273949	1274390	True	NM_001080461,NM_182491	chr7,chr7	+,-	UNCX,ZFAND2A	-1352,-74094
chr14:94579595-94580753	chr14	+	94579912	94580802	True	NM_032036,NM_001130080,NM_005532	chr14,chr14,chr14	-,+,+	IFI27L2,IFI27,IFI27	15205,-2884,-2884
chr10:48388655-48389094	chr10	+	48388660	48389122	True	NM_002900,NM_153034	chr10,chr10	-,+	RBP3,ZNF488	1919,-33622
chr1:203598797-203599350	chr1	+	203598813	203599203	True	NM_002023,NM_001684,NM_001001396	chr1,chr1,chr1	-,+,+	FMOD,ATP2B4,ATP2B4	-278524,-2936,-2936
chr14:23793480-23794458	chr14	+	23793682	23794264	True	NR_026862,NM_004643	chr14,chr14	-,+	PPP1R3E,PABPN1	-21625,-4336
chr11:63582770-63583330	chr11	+	63582938	63583162	True	NM_138471,NM_001144936	chr11,chr11	+,-	C11orf84,C11orf95	-2073,-46825
chr1:20810914-20811512	chr1	+	20810937	20811419	True	NM_207334,NM_018584	chr1,chr1	+,-	FAM43B,CAMK2N1	67512,1359
chr1:28559513-28559938	chr1	+	28559520	28559660	True	NM_178191,NM_016311,NM_014280,NM_178190	chr1,chr1,chr1,chr1	+,+,-,+	ATPIF1,ATPIF1,DNAJC8,ATPIF1	2941,2941,6,2941
chr7:151038588-151038857	chr7	+	151038845	151038905	True	NM_016118,NM_003078	chr7,chr7	+,-	NUB1,SMARCD3	-38,-64614
chr19:57946446-57947082	chr19	+	57946553	57946829	True	NM_020633,NM_001023561	chr19,chr19	-,+	VN1R1,ZNF749	21328,7
chrY:22918665-22919080	chrY	+	22918691	22919113	True	NM_001039567,NR_001542	chrY,chrY	+,-	RPS4Y2,TTTY10	-788,-237577
chr9:140657947-140658362	chr9	+	140657956	140658172	True	NM_032937,NR_024341	chr9,chr9	-,+	C9orf37,FLJ40292	-144648,-533
chr1:1261694-1262764	chr1	+	1261727	1262701	True	NM_001029885,NM_152228,NM_017871	chr1,chr1,chr1	+,+,-	GLTPD1,TAS1R3,CPSF3L	-1637,4024,-1681
chr11:122523703-122524948	chr11	+	122523926	122524980	True	NM_032873,NM_001098169	chr11,chr11	+,-	UBASH3B,BSX	1417,327449
chr3:28290439-28291936	chr3	+	28290721	28291956	True	NM_022461,NM_182523	chr3,chr3	-,+	AZI2,CMC1	98713,-7661
chr22:42017016-42017743	chr22	+	42017158	42017729	True	NM_015704,NM_001469	chr22,chr22	-,+	PPPDE2,XRCC6	-97,18
chr3:100613705-100615192	chr3	+	100614029	100615237	True	NM_015429,NM_001195478	chr3,chr3	-,+	ABI3BP,TFG	97154,-185702
chr13:111522612-111523893	chr13	+	111522732	111523698	True	NM_005537,NR_027701	chr13,chr13	+,-	ING1,C13orf29	-155424,-77
chr10:123360750-123361042	chr10	+	123360773	123360983	True	NM_000141,NM_022970,NM_001144916,NM_001144917,NM_001144914,NM_001144915,NM_206861,NM_001144913,NM_001144918,NM_001144919	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,-,-,+,-,-,-	FGFR2,FGFR2,FGFR2,FGFR2,FGFR2,FGFR2,TACC2,FGFR2,FGFR2,FGFR2	-2801,-2801,-7001,-2801,-7292,-4614,387705,-7292,-2801,-2801
chrX:75387082-75388601	chrX	+	75387414	75388390	True	NM_016500,NM_138703	chrX,chrX	+,-	CXorf26,MAGEE2	4380,-382335
chr2:166147841-166149200	chr2	+	166148289	166148941	True	NM_006922,NM_001040143,NM_021007	chr2,chr2,chr2	-,+,+	SCN3A,SCN2A,SCN2A	-87712,3341,1399
chr5:7841071-7843050	chr5	+	7842195	7843000	True	NM_001089584,NM_002454	chr5,chr5	-,+	C5orf49,MTRR	8322,26216
chr9:92254714-92255094	chr9	+	92254895	92255021	True	NR_024280,NM_006378	chr9,chr9	+,-	LOC100129066,SEMA4D	-248,-160284
chr16:681439-682216	chr16	+	681722	682240	True	NM_001040165,NM_001040160,NM_032366,NM_001040162,NM_053284,NM_138418,NM_001040161	chr16,chr16,chr16,chr16,chr16,chr16,chr16	-,-,-,-,+,+,-	C16orf13,C16orf13,C16orf13,C16orf13,WFIKKN1,FAM195A,C16orf13	4157,4157,4157,4157,-810,9608,4157
chr20:62666610-62667054	chr20	+	62666648	62667023	True	NR_027687,NR_027686,NM_018419	chr20,chr20,chr20	+,+,-	NCRNA00176,NCRNA00176,SOX18	-1003,-1003,14006
chr7:105906553-105908007	chr7	+	105906566	105907816	True	NM_152750,NM_005746	chr7,chr7	+,-	CDHR3,NAMPT	-302965,17873
chr11:36300790-36301020	chr11	+	36300849	36301053	True	NM_014186,NM_001101653,NM_001160167	chr11,chr11,chr11	-,-,+	COMMD9,COMMD9,PRR5L	9996,9996,16671
chr1:95394144-95395551	chr1	+	95394150	95395415	True	NM_001839,NR_033998	chr1,chr1	-,+	CNN3,LOC729970	-1415,-618
chr17:40337706-40338928	chr17	+	40337750	40338070	True	NR_024573,NM_012285,NM_033194,NM_032484,NM_001524,NM_001142622,NM_001142623	chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,-,-,-,-	GHDC,KCNH4,HSPB9,GHDC,HCRT,GHDC,GHDC	8235,-4454,-63045,8530,-280,8530,8530
chr17:48280255-48280523	chr17	+	48280261	48280469	True	NM_001135697,NM_000088	chr17,chr17	+,-	SGCA,COL1A1	-36947,-1261
chr2:85131554-85131765	chr2	+	85131647	85131722	True	NM_021103,NM_001080824	chr2,chr2	+,-	TMSB10,C2orf89	1040,-23395
chr17:34841948-34842667	chr17	+	34842043	34842587	True	NM_004773,NM_001040282	chr17,chr17	+,-	ZNHIT3,TBC1D3G	75,-33940
chrX:70838234-70838894	chrX	+	70838432	70838732	True	NM_001142797,NM_052957,NM_001504	chrX,chrX,chrX	-,+,-	CXCR3,ACRC,CXCR3	-65,-40609,-65
chr10:105155823-105156143	chr10	+	105155835	105156118	True	NM_014976,NR_031707,NM_032747	chr10,chr10,chr10	+,-,-	PDCD11,MIR1307,USMG5	293,-1677,155
chr9:87284300-87284679	chr9	+	87284302	87284666	True	NM_006180,NM_022127,NM_001007097,NM_001018064,NM_001018065,NM_001018066	chr9,chr9,chr9,chr9,chr9,chr9	+,-,+,+,+,+	NTRK2,SLC28A3,NTRK2,NTRK2,NTRK2,NTRK2	-887,-300889,-41,-887,-72,-72
chr19:14553210-14553659	chr19	+	14553339	14553707	True	NM_005804,NM_213560,NM_002741	chr19,chr19,chr19	-,+,+	DDX39A,PKN1,PKN1	-23144,-2304,-9224
chr1:150458588-150459285	chr1	+	150458918	150459261	True	NM_025150,NM_001197320	chr1,chr1	+,-	TARS2,MCL1	658,93004
chr7:16623328-16623689	chr7	+	16623343	16623725	True	NM_001195280,NM_020319	chr7,chr7	+,-	LOC100506049,ANKMY2	-56889,61767
chr17:47210632-47210994	chr17	+	47210641	47210999	True	NM_001159388,NM_031498,NM_001159387,NM_153446	chr17,chr17,chr17,chr17	+,-,+,+	B4GALNT2,GNGT2,B4GALNT2,B4GALNT2	-870,75794,-561,-363
chr17:63053552-63053940	chr17	+	63053708	63053964	True	NM_006572,NM_001165933	chr17,chr17	-,+	GNA13,RGS9	-788,79491
chr5:34658825-34659037	chr5	+	34658935	34659088	True	NM_001145520,NR_026591,NM_001145522,NM_015577	chr5,chr5,chr5,chr5	+,-,+,+	RAI14,RAD1,RAI14,RAI14	-2396,256695,-2559,-2559
chr17:79356222-79356874	chr17	+	79356281	79356698	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	16841,-51807
chr2:85327170-85328509	chr2	+	85327282	85328250	True	NM_001080824,NM_031283	chr2,chr2	-,+	C2orf89,TCF7L1	-219030,32332
chr10:14374367-14375009	chr10	+	14374410	14374941	True	NR_031668,NM_018027	chr10,chr10	+,-	MIR1265,FRMD4A	103633,-1544
chr7:32511472-32511730	chr7	+	32511516	32511712	True	NM_015060,NM_012322	chr7,chr7	+,-	AVL9,LSM5	23463,18361
chr19:36508725-36509406	chr19	+	36508972	36509212	True	NM_198867,NM_032878,NM_001039876,NM_001042631	chr19,chr19,chr19,chr19	-,-,-,+	ALKBH6,ALKBH6,C19orf46,SDHAF1	-3831,-3831,-9300,-22933
chr4:66504311-66506094	chr4	+	66504492	66505998	True	NR_034138,NM_004439	chr4,chr4	+,-	LOC100144602,EPHA5	29680,29716
chr4:40757265-40759100	chr4	+	40757555	40758688	True	NM_001166051,NM_024677	chr4,chr4	-,+	APBB2,NSUN7	100541,-5694
chr21:43629874-43630170	chr21	+	43629886	43630182	True	NM_004915,NM_207174,NM_016818,NR_027243,NM_207629	chr21,chr21,chr21,chr21,chr21	+,+,+,-,+	ABCG1,ABCG1,ABCG1,C21orf128,ABCG1	9084,9825,9084,-101242,6004
chr1:157512510-157513424	chr1	+	157512546	157513432	True	NM_001195388,NM_031281,NR_001560	chr1,chr1,chr1	-,-,+	FCRL5,FCRL5,CYCSP52	8928,8928,-414443
chr8:12990923-12991157	chr8	+	12991101	12991193	True	NM_001099677,NM_006094	chr8,chr8	+,-	KIAA1456,DLC1	-121379,-292
chr8:145061018-145061780	chr8	+	145061217	145061737	True	NM_000837,NM_032789,NM_001009184	chr8,chr8,chr8	+,-,+	GRINA,PARP10,GRINA	2488,-582,2488
chr17:48351223-48351430	chr17	+	48351249	48351337	True	NM_153229,NM_001168215,NM_000088	chr17,chr17,chr17	+,+,-	TMEM92,TMEM92,COL1A1	450,-2533,-72249
chr19:48325846-48326350	chr19	+	48325896	48326398	True	NM_000554,NM_198479	chr19,chr19	+,-	CRX,TPRX1	-848,-19035
chr14:59659625-59660873	chr14	+	59659868	59660893	True	NM_014992,NM_022571	chr14,chr14	+,-	DAAM1,GPR135	-4520,271223
chr19:42258024-42258993	chr19	+	42258187	42259019	True	NM_002483,NM_006890	chr19,chr19	+,-	CEACAM6,CEACAM7	378,-66091
chr13:36789433-36789818	chr13	+	36789567	36789811	True	NM_017826,NM_001111046	chr13,chr13	-,+	SOHLH2,CCNA1	-815,216155
chr4:71000253-71001684	chr4	+	71000315	71001673	True	NR_033311,NM_001891	chr4,chr4	+,-	CSN1S2BP,CSN2	-1055,-173589
chr11:69185515-69185816	chr11	+	69185575	69185851	True	NM_153451,NM_138768	chr11,chr11	-,+	ORAOV1,MYEOV	304364,-124004
chr2:102611272-102612319	chr2	+	102611475	102612315	True	NM_173343,NM_004633,NM_001145664	chr2,chr2,chr2	+,+,-	IL1R2,IL1R2,RFX8	3143,-3229,-520310
chr12:27175005-27175722	chr12	+	27175328	27175718	True	NM_004264,NM_016551	chr12,chr12	+,-	MED21,TM7SF3	-46,-7989
chr1:146721538-146723274	chr1	+	146721556	146723013	True	NM_004284,NM_001461	chr1,chr1	+,-	CHD1L,FMO5	-7331,-24326
chr1:25594158-25594390	chr1	+	25594208	25594356	True	NM_001127691,NM_020317,NM_016124	chr1,chr1,chr1	+,-,+	RHD,C1orf63,RHD	4624,-20223,4624
chr1:25594158-25594390	chr1	+	25664617	25664685	False	NM_020485,NM_014313	chr1,chr1	-,+	RHCE,TMEM50A	82728,103
chr19:52303840-52304246	chr19	+	52303847	52304237	True	NM_002029,NM_002030	chr19,chr19	-,+	FPR1,FPR3	-48697,-5487
chr8:11182977-11184401	chr8	+	11182976	11184097	True	NM_054028,NM_173683	chr8,chr8	+,-	AMAC1L2,XKR6	4397,-124101
chr19:54583657-54584163	chr19	+	54583856	54583936	True	NM_004542,NM_001135686	chr19,chr19	+,-	NDUFA3,TARM1	22223,752
chr19:39972576-39973013	chr19	+	39972643	39973008	True	NM_001001563,NM_001020	chr19,chr19	+,-	TIMM50,RPS16	-1642,-46025
chr1:155247399-155247656	chr1	+	155247512	155247602	True	NM_003993,NM_020897	chr1,chr1	-,+	CLK2,HCN3	-4231,-189
chr14:23427820-23429561	chr14	+	23428398	23429538	True	NM_017815,NM_173527,NM_001166269,NM_001166270	chr14,chr14,chr14,chr14	-,+,-,-	HAUS4,REM2,HAUS4,HAUS4	-2047,-76017,-2047,-2047
chr1:3818608-3820012	chr1	+	3818777	3820047	True	NR_024455,NM_207356	chr1,chr1	+,-	LOC100133612,C1orf174	-1860,-1920
chr5:42418479-42419793	chr5	+	42418694	42419803	True	NM_001085486,NM_000163	chr5,chr5	-,+	SEPP1,GHR	392272,4222
chr10:49452794-49453047	chr10	+	49452801	49453037	True	NM_001018071,NM_002750	chr10,chr10	-,+	FRMPD2,MAPK8	29954,156649
chr2:190440778-190441265	chr2	+	190440778	190441250	True	NM_019048,NM_014585	chr2,chr2	+,-	ASNSD1,SLC40A1	84874,4337
chrX:151286198-151286409	chrX	+	151286204	151286340	True	NM_001011550,NM_021049	chrX,chrX	+,-	MAGEA4,MAGEA5	-199495,154
chr6:138505652-138506611	chr6	+	138505745	138506574	True	NM_021635,NM_020340	chr6,chr6	-,+	PBOV1,KIAA1244	33103,-22753
chr11:4713542-4714064	chr11	+	4713615	4714085	True	NM_030774,NM_152430	chr11,chr11	-,+	OR51E2,OR51E1	5041,-48510
chr14:100068515-100069260	chr14	+	100068701	100069255	True	NM_032425,NM_001144995	chr14,chr14	+,-	HHIPL1,CCDC85C	42224,1522
chr2:233926786-233927850	chr2	+	233926944	233927788	True	NM_001017915,NM_005541,NM_019850	chr2,chr2,chr2	+,+,-	INPP5D,INPP5D,NGEF	-1959,-1959,-48993
chr5:14145316-14146325	chr5	+	14145360	14146254	True	NM_001369,NM_007118	chr5,chr5	-,+	DNAH5,TRIO	-200771,-1582
chr19:47141147-47141854	chr19	+	47141151	47141765	True	NM_033258,NM_005184	chr19,chr19	-,+	GNG8,CALM3	-3212,-36690
chr1:155290959-155291203	chr1	+	155290966	155291214	True	NM_001105205,NM_001105204,NM_014328,NM_001039517,NM_001105203	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	RUSC1,RUSC1,RUSC1,C1orf104,RUSC1	2513,-377,3003,2774,-377
chr11:9337657-9338489	chr11	+	9337656	9338428	True	NM_006391,NM_001165030,NM_015012,NR_028491	chr11,chr11,chr11,chr11	+,-,-,-	IPO7,TMEM41B,TMEM41B,TMEM41B	67740,-1360,-1360,-1360
chr9:111696841-111697051	chr9	+	111696846	111697100	True	NM_003640,NM_017832	chr9,chr9	-,+	IKBKAP,C9orf6	-238,-224
chr18:20717068-20717811	chr18	+	20717090	20717766	True	NM_001100619,NR_023359,NM_032933	chr18,chr18,chr18	+,+,-	CABLES1,CABLES1,C18orf45	-1415,-2614,300210
chr7:31638176-31639400	chr7	+	31638435	31639067	True	NM_194300,NM_022728	chr7,chr7	+,-	CCDC129,NEUROD6	-81516,-257897
chr12:125548785-125549725	chr12	+	125549490	125549726	True	NM_032656,NM_023928	chr12,chr12	-,+	DHX37,AACS	-75823,198
chr11:70992558-70993760	chr11	+	70992767	70993678	True	NM_018161,NM_012309	chr11,chr11	+,-	NADSYN1,SHANK2	170538,-56959
chrY:9638974-9639313	chrY	+	9639020	9639340	True	NR_001539,NR_003589	chrY,chrY	+,-	TTTY22,TTTY1B	-316,-27092
chrY:9638974-9639313	chrY	-	6231033	6231351	False	NR_001536,NR_003589	chrY,chrY	-,+	TTTY2,TTTY1B	65191,27090
chr12:13044635-13044895	chr12	+	13044675	13044900	True	NM_018654,NM_003979	chr12,chr12	-,+	GPRC5D,GPRC5A	58469,-770
chr9:117693069-117694655	chr9	+	117693082	117694678	True	NM_017418,NM_001244	chr9,chr9	+,-	DEC1,TNFSF8	209418,-312
chr10:23727588-23727794	chr10	+	23727647	23727711	True	NM_153714,NM_001145373	chr10,chr10	-,+	C10orf67,OTUD1	-93875,486
chr4:122853715-122854117	chr4	+	122853723	122854067	True	NM_003305,NM_005033	chr4,chr4	-,+	TRPC3,EXOSC9	251,-131302
chr2:33355326-33356955	chr2	+	33355399	33356995	True	NM_001166264,NM_001166265,NM_001166266,NM_000627,NM_015475	chr2,chr2,chr2,chr2,chr2	+,+,+,+,-	LTBP1,LTBP1,LTBP1,LTBP1,FAM98A	2668,2668,2668,2668,467418
chr2:37379721-37381323	chr2	+	37379721	37380927	True	NM_001135651,NR_037879,NM_001135652,NM_002759	chr2,chr2,chr2,chr2	-,+,-,-	EIF2AK2,LOC100505876,EIF2AK2,EIF2AK2	3322,42707,-4756,3322
chr16:58124913-58125260	chr16	+	58125006	58125085	True	NM_013242,NM_002428	chr16,chr16	-,+	C16orf80,MMP15	38274,-65786
chr7:140371894-140372141	chr7	+	140371969	140372143	True	NR_024454,NM_052853	chr7,chr7	-,+	LOC100134713,ADCK2	24784,809
chr19:35250449-35250869	chr19	+	35250453	35250913	True	NM_001007248,NM_001145665	chr19,chr19	-,+	ZNF599,ZNF181	13271,-25024
chrY:9747916-9748403	chrY	+	9747975	9748446	True	NR_001540,NR_003593,NR_003589	chrY,chrY,chrY	+,+,-	TTTY23,TTTY23B,TTTY1B	-40,-40,-136047
chrY:9747916-9748403	chrY	-	6111611	6112082	False	NM_022573,NR_001540,NR_003593	chrY,chrY,chrY	+,-,-	TSPY2,TTTY23,TTTY23B	2181,40,40
chr17:58603109-58603374	chr17	+	58603130	58603296	True	NM_006380,NM_003620	chr17,chr17	-,+	APPBP2,PPM1D	334,74247
chr17:2500277-2501397	chr17	+	2500372	2501269	True	NM_000430,NM_024086	chr17,chr17	+,-	PAFAH1B1,METTL16	-3509,-85172
chr2:200324279-200324547	chr2	+	200324308	200324560	True	NM_001172509,NM_001172517,NR_026830	chr2,chr2,chr2	-,-,+	SATB2,SATB2,FLJ32063	-1489,5321,8260
chr6:8065512-8066197	chr6	+	8065654	8066177	True	NM_201280,NR_037616,NM_001199323,NM_001199322,NR_027712	chr6,chr6,chr6,chr6,chr6	-,-,-,-,+	MUTED,MUTED-TXNDC5,MUTED,MUTED,PIP5K1P1	-1007,-1007,-1007,-1007,-79370
chr7:48067147-48068025	chr7	+	48067205	48068063	True	NM_001030019,NM_001100159,NM_152782	chr7,chr7,chr7	-,+,-	SUN3,C7orf57,SUN3	703,7053,703
chr15:62361334-62361636	chr15	+	62361373	62361444	True	NM_017684,NM_001018088,NM_018080,NM_020821,NM_207322	chr15,chr15,chr15,chr15,chr15	-,-,-,-,+	VPS13C,VPS13C,VPS13C,VPS13C,C2CD4A	-8709,-8709,-8709,-8709,-2249
chr22:20616077-20616685	chr22	+	20616220	20616684	True	NM_015672,NM_003426	chr22,chr22	-,+	RIMBP3,ZNF74	-154434,131795
chr22:20616077-20616685	chr22	-	18760851	18761315	False	NM_017414,NR_003267	chr22,chr22	+,-	USP18,GGT3P	-128144,18209
chr22:20616077-20616685	chr22	-	20365884	20366348	False	NR_003563,NR_026919	chr22,chr22	-,+	PI4KAP1,LOC150197	32397,-172080
chr22:20616077-20616685	chr22	-	21561943	21562407	False	NR_024583,NR_002829	chr22,chr22	+,-	POM121L8P,P2RX6P	74306,-163405
chr7:99757952-99758991	chr7	+	99758062	99758874	True	NM_018275,NM_024637,NM_001008395	chr7,chr7,chr7	-,-,+	C7orf43,GAL3ST4,C7orf59	-1760,7549,-11583
chr12:1739812-1740147	chr12	+	1739845	1740195	True	NM_032642,NR_037422	chr12,chr12	+,-	WNT5B,MIR3649	-1484,29401
chr7:128071375-128071583	chr7	+	128071559	128071634	True	NM_183243,NM_001098786	chr7,chr7	-,+	IMPDH1,C7orf68	-21523,24249
chr7:155090209-155090712	chr7	+	155090226	155090657	True	NM_001103176,NM_005542,NM_198337,NM_198336	chr7,chr7,chr7,chr7	-,+,+,+	CNPY1,INSIG1,INSIG1,INSIG1	235932,-791,-791,-791
chr1:156707890-156708170	chr1	+	156707889	156708191	True	NM_001142560,NM_015997,NM_024540,NM_145729	chr1,chr1,chr1,chr1	+,+,-,-	RRNAD1,RRNAD1,MRPL24,MRPL24	-9677,-9677,2782,2782
chr19:3785404-3785779	chr19	+	3785566	3785702	True	NM_139354,NM_139355,NM_172251	chr19,chr19,chr19	-,-,+	MATK,MATK,MRPL54	763,763,-22952
chr12:109128314-109128563	chr12	+	109128321	109128508	True	NM_001917,NM_014325	chr12,chr12	+,-	DAO,CORO1C	145348,-3026
chr15:25484938-25485724	chr15	+	25485080	25485670	True	NR_003344,NR_003358,NM_130838,NR_003353,NR_003352,NR_003351,NR_003350,NR_003357,NR_003356,NR_003355,NR_003354,NR_003302,NR_003303,NR_003348,NR_003349	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,-,+,+,+,+,+,+,+,+,+,+,+,+	SNORD115-29,SNORD115-43,UBE3A,SNORD115-38,SNORD115-37,SNORD115-36,SNORD115-35,SNORD115-42,SNORD115-41,SNORD115-40,SNORD115-39,SNORD115-10,SNORD115-11,SNORD115-33,SNORD115-34	-3899,-3899,165033,-146,-1998,-3899,-5737,6821,4954,3090,1222,6821,-3899,-9146,-7597
chr22:50494216-50494472	chr22	+	50494216	50494442	True	NM_139202,NM_001164104	chr22,chr22	-,+	MLC1,MOV10L1	29389,33992
chr5:108085346-108086613	chr5	+	108085379	108086542	True	NM_005246,NM_001163315	chr5,chr5	+,-	FER,FBXL17	-1914,-367580
chr19:3483426-3483655	chr19	+	3483491	3483677	True	NM_016263,NM_001136503	chr19,chr19	+,-	FZR1,C19orf77	22617,-2951
chr14:24607155-24607726	chr14	+	24607195	24607771	True	NM_016049,NM_203402,NM_002818,NM_006263,NM_176783,NM_017999	chr14,chr14,chr14,chr14,chr14,chr14	-,+,-,+,+,+	FAM158A,FITM1,PSME2,PSME1,PSME1,RNF31	3076,-6571,8134,-1868,-1868,8887
chr6:41886789-41887743	chr6	+	41886923	41887775	True	NM_004275,NM_004053	chr6,chr6	-,+	MED20,BYSL	1152,1189
chr15:40858065-40858595	chr15	+	40858159	40858437	True	NM_052849,NM_001080792,NM_001080791,NM_152260	chr15,chr15,chr15,chr15	-,-,-,+	C15orf57,C15orf57,C15orf57,RPUSD2	-907,-907,-907,3099
chr1:93845355-93846050	chr1	+	93846030	93846090	True	NR_034089,NM_001938	chr1,chr1	-,+	LOC100131564,DR1	-34662,-34605
chr3:142896046-142897954	chr6	-	32154232	32154411	True	NM_006913,NR_003129,NM_002586,NM_032741,NM_022107,NM_001136,NM_172197	chr6,chr6,chr6,chr6,chr6,chr6,chr6	+,+,-,-,-,-,-	RNF5,RNF5P1,PBX2,AGPAT1,GPSM3,AGER,AGER	-8250,-8180,3731,-8344,9068,-2209,-2209
chr12:26121366-26122182	chr12	+	26121647	26122225	True	NM_001164748,NM_007211,NM_001164747,NR_036188	chr12,chr12,chr12,chr12	+,+,+,-	RASSF8,RASSF8,RASSF8,MIR4302	-9734,-9734,4462,-94635
chr11:6279825-6280181	chr11	+	6279825	6280229	True	NM_176875,NM_032127	chr11,chr11	+,-	CCKBR,FAM160A2	736,-23884
chr19:14548249-14549490	chr19	+	14548318	14549187	True	NM_005804,NM_213560,NM_002741	chr19,chr19,chr19	-,+,+	DDX39A,PKN1,PKN1	-18123,1898,-4205
chr1:226129637-226130236	chr1	+	226129804	226130030	True	NM_003240,NM_000120,NM_001172425	chr1,chr1,chr1	-,+,-	LEFTY2,EPHX1,LEFTY2	-721,-116860,-721
chr17:41625819-41626953	chr17	+	41626398	41626856	True	NM_001079675,NM_004941,NM_001986	chr17,chr17,chr17	-,+,-	ETV4,DHX8,ETV4	-2636,-65115,-3093
chr9:125377795-125379409	chr9	+	125377811	125378998	True	NM_001004450,NM_012364	chr9,chr9	-,+	OR1B1,OR1Q1	12867,-845
chr7:45926193-45927584	chr7	+	45926509	45927621	True	NM_000596,NM_000598	chr7,chr7	+,-	IGFBP1,IGFBP3	337,33300
chr8:37352492-37352786	chr8	+	37352592	37352800	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	200500,252814
chrX:142722843-142723123	chrX	+	142722884	142723122	True	NM_001012989,NM_001184750,NM_001184749,NM_173078	chrX,chrX,chrX,chrX	+,-,-,-	UBE2NL,SLITRK4,SLITRK4,SLITRK4	244050,-565,854,-39
chr17:4634912-4635122	chr17	+	4635052	4635164	True	NM_001100812,NM_001136046,NM_032265,NM_001001683,NM_022059	chr17,chr17,chr17,chr17,chr17	-,+,+,+,-	CXCL16,ZMYND15,ZMYND15,MED11,CXCL16	8109,8154,8172,-380,8109
chr20:50806136-50807533	chr20	+	50806642	50807567	True	NM_173485,NM_018197,NM_199426,NM_022088,NM_199427	chr20,chr20,chr20,chr20,chr20	+,-,-,-,-	TSHZ2,ZFP64,ZFP64,ZFP64,ZFP64	781378,1007,1007,1007,1007
chr12:8489395-8490622	chr12	+	8489547	8490337	True	NM_001007033,NR_024420	chr12,chr12	+,-	CLEC6A,LOC389634	118253,53061
chr3:193921552-193921968	chr3	+	193921572	193921816	True	NR_024480,NM_005524	chr3,chr3	-,+	LOC100131551,HES1	108827,-67692
chr3:51896269-51897656	chr3	+	51896520	51897260	True	NM_001145059,NM_203424	chr3,chr3	-,+	IQCF5,IQCF2	12390,-934
chr1:203763496-203764140	chr1	+	203763537	203763767	True	NM_001174108,NM_014827,NR_027902	chr1,chr1,chr1	+,+,-	ZBED6,ZC3H11A,C1orf157	2883,983,246687
chr3:46758663-46759026	chr3	+	46758757	46758981	True	NM_013270,NM_147196	chr3,chr3	-,+	PRSS50,TMIE	442,-15985
chr12:52295922-52296455	chr12	+	52296220	52296325	True	NM_001077401,NM_000020,NM_001013690	chr12,chr12,chr12	+,+,-	ACVRL1,ACVRL1,FIGNL2	9787,4876,-70519
chr8:25902282-25902882	chr8	+	25902285	25902711	True	NM_002717,NM_022659	chr8,chr8	+,-	PPP2R2A,EBF2	246295,13
chrX:137851960-137853824	chrX	+	137851965	137853859	True	NM_033642,NR_028597	chrX,chrX	-,+	FGF13,SRD5A1P1	-30450,675118
chr10:118897974-118898878	chr10	+	118898027	118898847	True	NM_001112704,NM_199131,NM_181840	chr10,chr10,chr10	-,-,+	VAX1,VAX1,KCNK18	-215,-215,58152
chr19:11371178-11372206	chr19	+	11371611	11372119	True	NM_020812,NM_018687	chr19,chr19	-,+	DOCK6,LOC55908	1088,-21376
chr2:95537403-95537842	chr2	+	95537435	95537867	True	NR_003366,NM_144705	chr2,chr2	-,+	ANKRD20A8P,TEKT4	-14615,-254
chr2:103099577-103101031	chr2	+	103099771	103101064	True	NM_001011552,NM_032718	chr2,chr2	+,-	SLC9A4,MFSD9	-10060,252323
chr19:46106197-46106635	chr19	+	46106612	46106684	True	NM_005282,NM_000164	chr19,chr19	-,+	GPR4,GIPR	-1146,64817
chr19:35782139-35782802	chr19	+	35782495	35782655	True	NM_001199216,NM_152481,NM_021175,NM_080600,NM_002361	chr19,chr19,chr19,chr19,chr19	+,-,+,+,+	MAG,FAM187B,HAMP,MAG,MAG	333,-62867,-9136,333,333
chr17:7343562-7344025	chr17	+	7343586	7344072	True	NM_152766,NM_000747,NM_178518,NM_004112	chr17,chr17,chr17,chr17	-,+,+,+	C17orf61,CHRNB1,TMEM102,FGF11	-36136,4333,-4875,-948
chr5:178369983-178371228	chr5	+	178370079	178371219	True	NM_182594,NM_000843,NM_001178090,NM_001178089	chr5,chr5,chr5,chr5	+,-,+,+	ZNF454,GRM6,ZNF454,ZNF454	-1944,50955,-1944,-1944
chr2:98351699-98351926	chr2	+	98351710	98351944	True	NM_005735,NM_207519	chr2,chr2	-,+	ACTR1B,ZAP70	-71149,-892
chr3:111808229-111808692	chr3	+	111808421	111808696	True	NM_001171747,NM_024616,NM_001190259	chr3,chr3,chr3	+,+,-	C3orf52,C3orf52,GCET2	-3297,-3297,43513
chr7:2442417-2442791	chr7	+	2442586	2442838	True	NM_018641,NM_013321	chr7,chr7	+,-	CHST12,SNX8	420,-88487
chr13:102113846-102115024	chr13	+	102114112	102114872	True	NM_052867,NM_004791	chr13,chr13	-,+	NALCN,ITGBL1	-45299,-9208
chr2:31438604-31440368	chr2	+	31438604	31440384	True	NM_014600,NM_001145122	chr2,chr2	+,-	EHD3,CAPN14	16495,77
chr11:19368977-19369700	chr11	+	19368994	19369506	True	NM_001111018,NM_024680	chr11,chr11	+,-	NAV2,E2F8	2764,-106487
chr11:118401019-118401255	chr11	+	118401039	118401247	True	NM_001144038,NM_001144035,NM_001144034,NM_001144037,NM_001144036,NM_001080441,NM_001168618,NM_032780	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,+,-,+	TMEM25,TMEM25,TMEM25,TMEM25,TMEM25,TTC36,IFT46,TMEM25	555,555,555,555,555,-2887,35594,555
chr11:62495738-62496376	chr11	+	62495748	62496424	True	NM_001079559,NR_037946,NM_173810	chr11,chr11,chr11	-,-,+	HNRNPUL2,HNRNPUL2-BSCL2,TTC9C	-891,-892,35
chr2:216879663-216880613	chr2	+	216879692	216880606	True	NM_018000,NM_001142310	chr2,chr2	-,+	MREG,TMEM169	-1346,65982
chr16:67515294-67515520	chr16	+	67515329	67515563	True	NM_004691,NM_001138,NM_024519	chr16,chr16,chr16	-,-,+	ATP6V0D1,AGRP,FAM65A	-240,2203,47153
chr7:102920876-102921377	chr7	+	102920921	102921417	True	NR_027768,NR_003561,NM_004279	chr7,chr7,chr7	-,-,+	DPY19L2P2,DPY19L2P2,PMPCB	-8,-162,16455
chr3:49139288-49139665	chr3	+	49139347	49139697	True	NM_173546,NM_005051,NM_017730,NM_198880	chr3,chr3,chr3,chr3	+,-,-,-	KLHDC8B,QARS,QRICH1,QRICH1	69320,2524,-7843,-7843
chr7:127669237-127670186	chr7	+	127669272	127670114	True	NM_022143,NR_027330	chr7,chr7	-,+	LRRC4,C7orf54	938,-31761
chr13:50699232-50699596	chr13	+	50699308	50699528	True	NR_002612,NR_002605	chr13,chr13	-,+	DLEU2,DLEU1	199,-42945
chr11:125555272-125556917	chr11	+	125555417	125556698	True	NM_020108,NM_020069,NM_001612,NM_020107,NM_138294,NM_001274	chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,+,+	ACRV1,ACRV1,ACRV1,ACRV1,PATE1,CHEK1	-4624,-4624,-4624,-4624,59489,-59156
chr11:74022780-74023948	chr11	+	74022891	74023989	True	NM_182904,NM_016147	chr11,chr11	-,+	P4HA3,PPME1	-192,-140574
chr6:56029246-56031219	chr6	+	56029264	56031139	True	NM_152731,NM_030820	chr6,chr6	+,-	BEND6,COL21A1	788633,81289
chr2:131515081-131515425	chr2	+	131515121	131515409	True	NM_001105193,NM_001079530,NM_001105195,NM_001105194,NM_152698	chr2,chr2,chr2,chr2,chr2	+,-,+,+,+	FAM123C,CFC1B,FAM123C,FAM123C,FAM123C	-1948,-157870,-1308,-1308,-2095
chr5:72156897-72158767	chr5	+	72157190	72158811	True	NM_153188,NM_152625	chr5,chr5	+,-	TNPO1,ZNF366	-13316,-353941
chr2:175198909-175199546	chr2	+	175198995	175199433	True	NM_001145250,NM_004882	chr2,chr2	+,-	SP9,CIR1	387,61064
chr2:74700606-74701369	chr2	+	74700742	74700870	True	NM_001146158,NM_053050,NR_027749,NM_006302,NM_032779,NM_022492	chr2,chr2,chr2,chr2,chr2,chr2	-,-,+,-,-,+	MOGS,MRPL53,TTC31,MOGS,CCDC142,TTC31	-8205,-800,9329,-8205,9537,9329
chr8:38832208-38832421	chr8	+	38832275	38832399	True	NM_001024380,NM_153692	chr8,chr8	-,+	TM2D2,HTRA4	21692,-658
chr5:83042305-83042715	chr5	+	83042622	83042728	True	NM_001884,NM_004385	chr5,chr5	-,+	HAPLN1,VCAN	-25726,-275180
chr1:11907365-11909073	chr1	+	11907622	11909040	True	NR_037806,NM_006172	chr1,chr1	+,-	NPPA-AS1,NPPA	-7297,218
chr8:38122638-38124009	chr8	+	38122839	38123841	True	NM_001164232,NM_001102560,NM_001102559,NM_032483	chr8,chr8,chr8,chr8	+,-,-,-	DDHD2,PPAPDC1B,PPAPDC1B,PPAPDC1B	-33420,2947,2947,2947
chr1:219609862-219611200	chr1	+	219609939	219610923	True	NM_138794,NM_018713	chr1,chr1	+,-	LYPLAL1,SLC30A10	-262798,491120
chr20:18037367-18037618	chr20	+	18037544	18037604	True	NM_021220,NM_001164811	chr20,chr20	-,+	OVOL2,PET117	967,80894
chr12:62652959-62653946	chr12	+	62653080	62653850	True	NM_006313,NM_178539	chr12,chr12	+,-	USP15,FAM19A2	336,-66529
chr22:35775119-35776961	chr22	+	35775118	35776939	True	NM_005368,NM_002133	chr22,chr22	-,+	MB,HMOX1	236496,120
chr1:115123936-115124276	chr1	+	115123943	115124315	True	NM_003176,NM_005872	chr1,chr1	+,-	SYCP1,BCAS2	273139,0
chr5:140229839-140230399	chr5	+	140229886	140230444	True	NM_014005,NM_031860,NM_002109,NM_018911,NM_031859,NM_031856,NM_031857,NM_018901	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,-,+,+,+,+,+	PCDHA9,PCDHA10,HARS,PCDHA8,PCDHA10,PCDHA8,PCDHA9,PCDHA10	-2580,5189,-158915,-9030,5189,-9030,-2580,5189
chr8:28562464-28562765	chr8	+	28562506	28562770	True	NM_001172562,NM_001440	chr8,chr8	-,+	INTS9,EXTL3	184712,-3411
chr2:8982744-8984693	chr2	+	8982758	8984299	True	NM_020738,NM_002166	chr2,chr2	-,+	KIDINS220,ID2	-5003,-160696
chr1:1568537-1568827	chr1	+	1568563	1568711	True	NM_001110781,NM_006983,NR_002946	chr1,chr1,chr1	-,+,+	SLC35E2B,MMP23B,MMP23A	55582,-1054,-455
chr1:1568537-1568827	chr1	+	1631782	1631930	False	NM_001110781,NR_002946	chr1,chr1	-,+	SLC35E2B,MMP23A	-7539,-455
chr14:74817412-74818244	chr14	+	74817420	74817896	True	NR_003256,NM_018228	chr14,chr14	-,+	ABCD4,VRTN	-47653,-2305
chr19:39236161-39236699	chr19	+	39236434	39236562	True	NM_144691,NM_001042507	chr19,chr19	-,+	CAPN12,LGALS7B	-1320,43287
chr22:25358775-25359185	chr22	+	25358789	25359093	True	NM_001145206,NM_001001663	chr22,chr22	+,-	KIAA1671,TMEM211	64847,-23475
chr15:84903868-84905052	chr15	+	84904427	84904509	True	NR_027001,NR_033738	chr15,chr15	-,+	LOC388152,LOC440300	-5507,-43878
chr1:6661807-6662029	chr1	+	6661851	6662055	True	NM_014851,NM_153812	chr1,chr1	-,+	KLHL21,PHF13	924,11700
chr5:156636066-156637003	chr5	+	156636408	156636927	True	NM_130899,NM_005546	chr5,chr5	-,+	FAM71B,ITK	-43129,-28554
chr8:100071524-100072691	chr8	+	100071719	100072507	True	NM_152564,NM_006281	chr8,chr8	+,-	VPS13B,STK3	-46276,-233810
chr12:129308850-129309053	chr12	+	129309007	129309079	True	NM_145648,NM_144669	chr12,chr12	-,+	SLC15A4,GLT1D1	-466,29001
chr6:166580394-166580634	chr6	+	166580550	166580682	True	NM_003181,NR_027284	chr6,chr6	-,+	T,LOC441177	1499,-179562
chr19:14046945-14048635	chr19	+	14047196	14048662	True	NM_138353,NM_024825	chr19,chr19	+,-	DCAF15,PODNL1	14656,677
chr4:153868225-153869098	chr4	+	153868538	153869140	True	NM_033393,NM_145720	chr4,chr4	+,-	FHDC1,TIGD4	-4454,-167622
chr22:17266129-17266608	chr22	+	17266238	17266425	True	NR_003607,NM_175878	chr22,chr22	+,-	HSFY1P1,XKR3	41938,36214
chr19:12552096-12552351	chr19	+	12552099	12552195	True	NM_153358,NM_005815	chr19,chr19	+,-	ZNF791,ZNF443	169536,-173
chr19:54678075-54678494	chr19	+	54678074	54678528	True	NM_001145303,NM_144686,NM_024075	chr19,chr19,chr19	-,-,+	TMC4,TMC4,TSEN34	-1130,-1130,15590
chr13:57734716-57734954	chr13	+	57734723	57734989	True	NM_001130407,NM_001130406,NM_001130405,NM_001130404,NM_198441,NR_031628	chr13,chr13,chr13,chr13,chr13,chr13	+,+,+,+,+,-	PRR20E,PRR20D,PRR20C,PRR20B,PRR20A,MIR1297	-8,-8,-8,-8,-8,-2848540
chr13:57734716-57734954	chr13	+	57741288	57741554	False	NM_001130407,NM_001130406,NM_001130405,NM_001130404,NM_198441,NM_030932	chr13,chr13,chr13,chr13,chr13,chr13	+,+,+,+,+,-	PRR20E,PRR20D,PRR20C,PRR20B,PRR20A,DIAPH3	-8,-8,-8,-8,-8,2845839
chr13:57734716-57734954	chr13	+	57728152	57728418	False	NM_001130407,NM_001130406,NM_001130405,NM_001130404,NM_198441,NR_031628	chr13,chr13,chr13,chr13,chr13,chr13	+,+,+,+,+,-	PRR20E,PRR20D,PRR20C,PRR20B,PRR20A,MIR1297	-8,-8,-8,-8,-8,-2841969
chr13:57734716-57734954	chr13	+	57715009	57715275	False	NM_001130407,NM_001130406,NM_001130405,NM_001130404,NM_198441,NR_031628	chr13,chr13,chr13,chr13,chr13,chr13	+,+,+,+,+,-	PRR20E,PRR20D,PRR20C,PRR20B,PRR20A,MIR1297	-8,-8,-8,-8,-8,-2828826
chr13:57734716-57734954	chr13	+	57721579	57721845	False	NM_001130407,NM_001130406,NM_001130405,NM_001130404,NM_198441,NR_031628	chr13,chr13,chr13,chr13,chr13,chr13	+,+,+,+,+,-	PRR20E,PRR20D,PRR20C,PRR20B,PRR20A,MIR1297	-8,-8,-8,-8,-8,-2835396
chr19:8454916-8455229	chr19	+	8454923	8455211	True	NM_198471,NM_004218	chr19,chr19	-,+	KANK3,RAB11B	-46777,-7
chr11:66238775-66239421	chr11	+	66238795	66239270	True	NM_170739,NM_145065,NM_130443,NM_001098510,NM_005700	chr11,chr11,chr11,chr11,chr11	-,+,+,+,+	MRPL11,PELI3,DPP3,PELI3,DPP3	-32485,-4510,8609,-4510,8609
chr9:2714357-2714965	chr9	+	2714384	2714524	True	NM_133497,NR_015375	chr9,chr9	+,-	KCNV2,FLJ35024	3001,-92011
chr11:92928167-92929623	chr11	+	92928274	92929511	True	NM_152313,NM_181645	chr11,chr11	-,+	SLC36A4,CCDC67	1639,134371
chr10:93558696-93558937	chr10	+	93558902	93558976	True	NM_025235,NM_152429	chr10,chr10	+,-	TNKS2,FGFBP3	-806,110332
chr18:18819893-18820937	chr18	+	18820001	18820926	True	NM_005406,NM_001142966	chr18,chr18	-,+	ROCK1,GREB1L	-128189,1276
chr4:164410201-164411723	chr4	+	164410314	164411755	True	NM_032136,NM_018352	chr4,chr4	-,+	TKTL2,C4orf43	-15267,3917
chr9:127963001-127964225	chr9	+	127963247	127963732	True	NM_002721,NM_005833,NM_001174152,NM_001174153	chr9,chr9,chr9,chr9	-,+,+,+	PPP6C,RABEPK,RABEPK,RABEPK	-11029,-436,-477,-477
chr19:15316138-15316674	chr19	+	15316401	15316728	True	NM_033025,NM_000435	chr19,chr19	+,-	SYDE1,NOTCH3	-98252,-4609
chr1:21835215-21835651	chr1	+	21835437	21835603	True	NM_001177520,NM_001145658,NM_000478,NM_001127501	chr1,chr1,chr1,chr1	+,-,+,+	ALPL,RAP1GAP,ALPL,ALPL	254,142795,254,254
chr2:136876690-136876898	chr2	+	136876729	136876873	True	NM_001008540,NM_003467,NM_014607	chr2,chr2,chr2	-,-,+	CXCR4,CXCR4,UBXN4	-2916,-1004,-377592
chr2:38305083-38305695	chr2	+	38305323	38305528	True	NR_027252,NM_000104	chr2,chr2	+,-	C2orf58,CYP1B1	52718,-2000
chr1:117305630-117306480	chr1	+	117305705	117306464	True	NM_001767,NM_001542	chr1,chr1	+,-	CD2,IGSF3	-8670,-95391
chr4:187123669-187124574	chr4	+	187123671	187124515	True	NM_207352,NM_021069	chr4,chr4	+,-	CYP4V2,SORBS2	-11048,-245801
chr15:79725593-79726196	chr15	+	79725611	79726219	True	NM_015206,NM_002891	chr15,chr15	+,-	KIAA1024,RASGRF1	-804,-342396
chr10:106402309-106402572	chr10	+	106402369	106402621	True	NM_033397,NM_014978	chr10,chr10	-,+	ITPRIP,SORCS3	-308706,-1561
chr21:46105649-46106395	chr21	+	46105655	46106307	True	NM_181686,NM_198699	chr21,chr21	-,+	KRTAP12-1,KRTAP10-12	-3577,10779
chr6:52050743-52052498	chr6	+	52051146	52052547	True	NM_002190,NM_052872	chr6,chr6	+,-	IL17A,IL17F	-13,56801
chr12:10337471-10338225	chr12	+	10337634	10338207	True	NM_153022,NM_002543	chr12,chr12	+,-	C12orf59,OLR1	-6139,-12844
chr7:37908578-37909488	chr7	+	37908585	37909429	True	NM_003014,NM_016616	chr7,chr7	-,+	SFRP4,TXNDC3	47146,-20437
chr10:103457676-103458630	chr10	+	103457815	103458679	True	NR_036114,NM_022039	chr10,chr10	+,-	MIR3158-1,FBXW4	-96701,-3072
chr8:66685776-66687052	chr8	+	66686005	66687102	True	NM_002603,NM_001145838	chr8,chr8	-,+	PDE7A,MTFR1	14282,-103954
chr2:24270896-24272274	chr2	+	24270973	24272025	True	NM_004116,NM_025203,NM_054033,NM_001142319	chr2,chr2,chr2,chr2	+,-,+,-	FKBP1B,C2orf44,FKBP1B,C2orf44	558,-677,558,-677
chr6:15041330-15042350	chr6	+	15041731	15042322	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	204204,621018
chr17:38815566-38816690	chr17	+	38815719	38816453	True	NM_152349,NM_001195387	chr17,chr17	-,+	KRT222,TMEM99	5013,158890
chr13:95952875-95953289	chr13	+	95952885	95953045	True	NM_001105515,NM_005845,NM_001160100	chr13,chr13,chr13	-,-,+	ABCC4,ABCC4,CLDN10	700,700,132807
chr13:28745847-28746447	chr13	+	28745880	28746320	True	NR_029383,NM_175854	chr13,chr13	-,+	LOC100288730,PAN3	-32569,-33289
chr19:35257472-35257742	chr19	+	35257487	35257729	True	NM_001007248,NM_001145665	chr19,chr19	-,+	ZNF599,ZNF181	6455,-32058
chr6:24666358-24666808	chr6	+	24666398	24666850	True	NM_018473,NM_016614,NM_001160094	chr6,chr6,chr6	+,-,+	ACOT13,TDP2,ACOT13	412,315,412
chr20:62493918-62494197	chr20	+	62493961	62494245	True	NM_080622,NM_025224,NM_199359,NM_003288,NM_199363,NM_199362,NM_199361,NM_199360	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,-,+,+,+,+,+,+	ABHD16B,ZBTB46,TPD52L2,TPD52L2,TPD52L2,TPD52L2,TPD52L2,TPD52L2	-1446,-57105,2344,2344,2344,2344,2344,2344
chrX:100603855-100605622	chrX	+	100603911	100605304	True	NM_001145951,NM_021029,NM_004085	chrX,chrX,chrX	-,+,-	TIMM8A,RPL36A,TIMM8A	-203,40573,46
chr3:80820413-80821613	chr3	+	80820537	80821572	True	NM_001128929,NM_000158	chr3,chr3	+,-	ROBO2,GBE1	-3673425,989437
chr7:150443125-150444318	chr7	+	150443260	150444110	True	NM_001162367,NM_001101311,NM_018384	chr7,chr7,chr7	+,-,+	LOC100128542,TMEM176B,GIMAP5	2713,53561,-8890
chr14:20932110-20933715	chr14	+	20932211	20933707	True	NM_001641,NM_001100814,NM_017807,NM_080648,NM_080649,NM_000270,NM_144568	chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,-,-,+,+,+,-	APEX1,TMEM55B,OSGEP,APEX1,APEX1,PNP,TMEM55B	-8983,-2574,-8944,-8983,-8983,3830,-2574
chrX:47003412-47003752	chrX	+	47003539	47003645	True	NR_024234,NR_024235,NM_001204468,NM_001204467,NM_001135998,NM_005676,NM_019056,NM_001204466,NM_152856	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,+,+,-,+,-,+,+	NDUFB11,NDUFB11,RBM10,RBM10,NDUFB11,RBM10,NDUFB11,RBM10,RBM10	1014,1014,971,971,500,971,500,971,971
chr15:50976289-50976692	chr15	+	50976478	50976544	True	NM_017672,NM_007347	chr15,chr15	-,+	TRPM7,AP4E1	2524,224401
chr6:4837992-4839011	chr6	+	4838102	4838818	True	NM_001143970,NM_006638	chr6,chr6	+,-	CDYL,RPP40	-1821,165511
chr3:193936702-193937708	chr3	+	193936886	193937740	True	NR_024480,NM_005524	chr3,chr3	-,+	LOC100131551,HES1	92903,-83015
chr22:18118768-18119758	chr22	+	18119595	18119763	True	NM_001696,NM_001039366,NM_001039367,NM_015367	chr22,chr22,chr22,chr22	-,-,-,+	ATP6V1E1,ATP6V1E1,ATP6V1E1,BCL2L13	-8007,-8007,-8007,1721
chr9:15527317-15527803	chr9	+	15527357	15527605	True	NM_173550,NM_033222	chr9,chr9	+,-	C9orf93,PSIP1	25491,-16354
chr1:220962053-220963991	chr1	+	220962153	220963976	True	NM_022746,NM_012414	chr1,chr1	+,-	MOSC1,RAB3GAP2	-2166,-516310
chr4:123538731-123540224	chr4	+	123538794	123540055	True	NM_001178007,NM_021803	chr4,chr4	+,-	BBS12,IL21	113801,2212
chr9:38435503-38437311	chr9	+	38435611	38437343	True	NM_001007563,NM_000692	chr9,chr9	-,+	IGFBPL1,ALDH1B1	-11167,-42964
chr11:1718509-1720214	chr11	+	1718842	1719843	True	NR_026642,NM_001012416	chr11,chr11	-,+	FAM99B,KRTAP5-6	-11983,-468
chr20:235853-236822	chr20	+	236030	236661	True	NM_207469,NM_153269	chr20,chr20	+,-	DEFB132,C20orf96	1715,34791
chr21:9966489-9968237	chr21	+	9967505	9968165	True	NM_001033515,NR_037458	chr21,chr21	-,+	LOC100132288,MIR3687	470,-141356
chr13:21523200-21524103	chr13	+	21523583	21523806	True	NM_022459,NM_005870	chr13,chr13	-,+	XPO4,SAP18	-46670,190846
chr5:115178205-115178528	chr5	+	115178330	115178576	True	NM_001284,NR_033362,NR_033363,NM_004707	chr5,chr5,chr5,chr5	+,-,-,-	AP3S1,ATG12,ATG12,ATG12	-762,-782,-782,-782
chr3:120627942-120628539	chr3	+	120627971	120628477	True	NM_173825,NM_014980	chr3,chr3	-,+	RABL3,STXBP5L	-166587,-973
chr11:64546669-64546936	chr11	+	64546733	64546945	True	NM_001178030,NM_001178031,NM_004630,NM_201997,NM_006244,NM_201995,NR_033649,NM_201998,NR_033650	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,+,-,-,-,-	SF1,SF1,SF1,SF1,PPP2R5B,SF1,SF1,SF1,SF1	-795,-1501,-417,-417,145197,-417,-417,-417,-417
chr22:29713968-29714358	chr22	+	29714036	29714344	True	NM_152237,NM_001007279,NM_006477	chr22,chr22,chr22	+,-,-	GAS2L1,RASL10A,RASL10A	-11091,-2288,-2288
chr5:76518168-76518507	chr5	+	76518412	76518502	True	NM_003719,NM_032367	chr5,chr5	+,-	PDE8B,ZBED3	-11764,-135382
chr17:8079798-8080016	chr17	+	8079836	8079986	True	NM_032354,NM_183065,NR_037447	chr17,chr17,chr17	-,-,+	TMEM107,TMEM107,MIR3676	-122,-122,10506
chr19:44320927-44322455	chr19	+	44321316	44322380	True	NM_182573,NM_181845	chr19,chr19	-,+	LYPD5,ZNF283	2485,9092
chr18:55394742-55396109	chr18	+	55395093	55395899	True	NM_005603,NM_004852	chr18,chr18	-,+	ATP8B1,ONECUT2	74478,-292227
chr22:42323217-42323662	chr22	+	42323359	42323423	True	NM_052945,NR_024355	chr22,chr22	-,+	TNFRSF13C,LOC339674	-538,24767
chr20:57226718-57226979	chr20	+	57226890	57227026	True	NR_037945,NR_037941,NR_037943,NR_037942,NM_153360,NM_001134773,NM_001134772,NM_003763,NM_001204868,NM_001001433	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,+,+,+,-,+,+,+,+,+	STX16-NPEPL1,STX16,STX16,STX16,APCDD1L,STX16,STX16,STX16,STX16,STX16	-632,-632,-632,-632,-136941,-632,-632,-632,-632,-632
chr9:132082652-132082960	chr9	+	132082779	132082961	True	NM_001012715,NM_203434	chr9,chr9	+,-	C9orf106,IER5L	333,-142239
chr20:47896084-47897998	chr20	+	47896409	47898016	True	NR_003605,NR_003604,NR_002433,NR_003606,NR_003695,NR_036658,NR_036659,NM_021035,NR_003030	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,+,+,+,+,+,+,-,+	NCRNA00275,NCRNA00275,SNORD12C,NCRNA00275,SNORD12B,NCRNA00275,NCRNA00275,ZNFX1,SNORD12	-1752,-1752,-985,-1752,90,-1752,-1288,-1653,-82
chr22:40577969-40579011	chr22	+	40578363	40579032	True	NM_152512,NM_001162501,NM_015088	chr22,chr22,chr22	-,+,+	ENTHD1,TNRC6B,TNRC6B	-288569,-4496,-4496
chr7:155605056-155605391	chr7	+	155605059	155605418	True	NM_000193,NM_053043	chr7,chr7	-,+	SHH,RBM33	-92,-167907
chr5:174904683-174905393	chr5	+	174904813	174905336	True	NM_000794,NM_022754	chr5,chr5	-,+	DRD1,SFXN1	-33650,177
chr10:33244209-33245490	chr10	+	33244377	33245278	True	NM_002211,NM_133376,NM_024688	chr10,chr10,chr10	-,-,+	ITGB1,ITGB1,C10orf68	2070,1599,-387777
chr6:117086038-117086267	chr6	+	117086090	117086228	True	NM_001085480,NM_002269	chr6,chr6	-,+	FAM162B,KPNA5	708,-83774
chr12:52344099-52345225	chr12	+	52344101	52344988	True	NM_020328,NM_001013690,NM_004302,NM_020327	chr12,chr12,chr12,chr12	+,-,+,+	ACVR1B,FIGNL2,ACVR1B,ACVR1B	462,-118400,462,2175
chr7:150863730-150864059	chr7	+	150863780	150863994	True	NM_001098834,NM_019015	chr7,chr7	-,+	GBX1,CHPF2	923,65590
chr17:4046314-4046674	chr17	+	4046320	4046502	True	NM_015113,NM_144611,NR_023346,NR_023347	chr17,chr17,chr17,chr17	-,+,+,+	ZZEF1,CYB5D2,CYB5D2,CYB5D2	-67,-5,-5,-5
chr14:23621917-23622945	chr14	+	23621923	23622959	True	NM_017924,NM_182728	chr14,chr14	+,-	C14orf119,SLC7A8	-57186,701
chr19:40974579-40975262	chr19	+	40974601	40975152	True	NM_000713,NM_020971	chr19,chr19	-,+	BLVRB,SPTBN4	-2876,-1526
chr1:148194745-148195957	chr7	-	55538540	55539314	False	NM_018697,NM_030796	chr7,chr7	+,-	LANCL2,VOPP1	-105450,100936
chr1:148194745-148195957	chr1	+	148195090	148196006	True	NM_001164262,NM_001170755,NM_001164261	chr1,chr1,chr1	-,+,-	PPIAL4F,NBPF15,PPIAL4D	6580,362181,6580
chr12:14721051-14721384	chr12	+	14721058	14721418	True	NM_024829,NM_018179	chr12,chr12	-,+	PLBD1,ATF7IP	-267,-202498
chr19:5452794-5453608	chr19	+	5452888	5453428	True	NM_130855,NM_181710	chr19,chr19	-,+	PTPRS,ZNRF4	-112074,1997
chr3:196669963-196670364	chr3	+	196669980	196670352	True	NM_007362,NR_024388,NM_001042540	chr3,chr3,chr3	-,+,-	NCBP2,LOC152217,NCBP2	-516,-537,-516
chr6:155407136-155407560	chr6	+	155407190	155407567	True	NM_012454,NM_016020	chr6,chr6	+,-	TIAM2,TFB1M	3855,228107
chr2:147346788-147347345	chr2	+	147346787	147347085	True	NM_001190882,NR_026904	chr2,chr2	-,+	ORC4,PABPC1P2	1431277,-2213
chr7:64838090-64838746	chr7	+	64838485	64838753	True	NM_152626,NM_001007253,NM_007139	chr7,chr7,chr7	+,-,+	ZNF92,ERV3,ZNF92	14,-371361,14
chr8:141643663-141644141	chr8	+	141643757	141644111	True	NR_023360,NM_001164623,NM_012154	chr8,chr8,chr8	+,-,-	CHRAC1,EIF2C2,EIF2C2	-122393,1585,1585
chr2:86792384-86792822	chr2	+	86792500	86792756	True	NM_016079,NM_001146688,NR_036454,NM_001193517,NM_001005753	chr2,chr2,chr2,chr2,chr2	-,+,-,-,-	VPS24,KDM3A,VPS24,VPS24,VPS24	-1880,-123981,-1880,-1880,-1880
chrX:64718972-64719904	chrX	+	64719006	64719922	True	NM_001010888,NM_001170649	chrX,chrX	+,-	ZC3H12B,LAS1L	-10443,34820
chr3:169683459-169683919	chr3	+	169683720	169683968	True	NM_003262,NR_027622,NR_024409	chr3,chr3,chr3	+,-,-	SEC62,LOC100128164,LOC100128164	611,604,604
chr8:134340546-134340749	chr8	+	134340576	134340780	True	NR_037944,NM_006096	chr8,chr8	+,-	WISP1,NDRG1	-137346,-31029
chr20:61844706-61845943	chr20	+	61844854	61845697	True	NM_022161,NM_017798	chr20,chr20	+,-	BIRC7,YTHDF1	21578,1892
chr5:39058189-39058608	chr5	+	39058189	39058641	True	NM_003999,NM_152756	chr5,chr5	+,-	OSMR,RICTOR	-212141,15916
chr17:27229110-27229513	chr17	+	27229150	27229408	True	NM_144683,NM_005702,NM_004475	chr17,chr17,chr17	-,+,-	DHRS13,ERAL1,FLOT2	731,-47161,-4435
chr16:66864082-66864418	chr16	+	66864081	66864405	True	NM_003905,NM_005182,NM_001018159,NM_001018160	chr16,chr16,chr16,chr16	-,+,-,-	NAE1,CA7,NAE1,NAE1	524,13876,524,524
chr22:17518793-17520133	chr22	+	17519147	17519918	True	NM_001037814,NR_015352	chr22,chr22	-,+	GAB4,CECR7	-30035,-1744
chr1:212799409-212799659	chr1	+	212799431	212799647	True	NM_153606,NM_018664	chr1,chr1	+,-	FAM71A,BATF3	-1693,73730
chr22:25614343-25615353	chr22	+	25614923	25615337	True	NM_182492,NM_000496	chr22,chr22	-,+	LRP5L,CRYBB2	143237,274
chr12:21355129-21355595	chr12	+	21355420	21355648	True	NM_021094,NM_006446	chr12,chr12	-,+	SLCO1A2,SLCO1B1	132248,-71351
chr16:2803430-2803842	chr16	+	2803546	2803794	True	NM_016333,NR_027274,NR_027275	chr16,chr16,chr16	+,-,-	SRRM2,LOC100128788,LOC100128788	-1269,-8748,-945
chr8:17393334-17393536	chr8	+	17393440	17393583	True	NM_001164771,NM_003046,NM_004686	chr8,chr8,chr8	+,+,-	SLC7A2,SLC7A2,MTMR7	2702,2702,-122400
chr12:40619183-40620879	chr12	+	40619386	40620908	True	NM_052885,NM_198578	chr12,chr12	-,+	SLC2A13,LRRK2	-119725,-624
chr6:37225947-37226195	chr6	+	37226018	37226210	True	NM_001162900,NM_017772,NM_145316	chr6,chr6,chr6	-,+,-	TMEM217,TBC1D22B,TMEM217	-87,-521,-605
chr8:119634626-119634941	chr8	+	119634730	119634852	True	NM_207506,NM_006438,NM_001101676	chr8,chr8,chr8	-,+,-	SAMD12,COLEC10,SAMD12	-546,444571,-546
chr2:241496919-241497247	chr2	+	241496926	241497164	True	NM_001033575,NM_017844,NM_016552	chr2,chr2,chr2	+,-,-	DUSP28,ANKMY1,ANKMY1	2306,291,291
chr9:130214253-130215654	chr9	+	130214819	130215698	True	NM_001005374,NM_001190723,NM_001005373,NM_138361,NR_002449,NM_000976	chr9,chr9,chr9,chr9,chr9,chr9	+,+,+,+,-,-	LRSAM1,LRSAM1,LRSAM1,LRSAM1,SNORA65,RPL12	-336,-1105,-1105,-1081,-3903,-1108
chr1:28243749-28244859	chr1	+	28244093	28244701	True	NM_001009568,NM_002946	chr1,chr1	+,-	SMPDL3B,RPA2	16802,-2857
chr5:10613487-10614275	chr5	+	10613679	10614295	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-49306,147142
chr3:41263727-41264213	chr3	+	41263730	41264261	True	NM_001904,NM_017886	chr3,chr3	+,-	CTNNB1,ULK4	-22839,739456
chr6:91007304-91007953	chr6	+	91007376	91007980	True	NM_021813,NM_032602,NM_001170794	chr6,chr6,chr6	-,+,-	BACH2,GJA10,BACH2	-814,-403239,-749
chr19:48258823-48259270	chr19	+	48258822	48259299	True	NM_198479,NR_003048	chr19,chr19	-,+	TPRX1,SNORD23	47612,18
chr15:50836807-50838542	chr15	+	50836936	50838506	True	NM_005154,NM_203494	chr15,chr15	+,-	USP8,USP50	-120408,446
chr9:88715176-88716833	chr9	+	88715292	88716685	True	NM_177937,NM_024635,NM_016548	chr9,chr9,chr9	-,+,-	GOLM1,NAA35,GOLM1	-176,-159292,-782
chr4:117516306-117517711	chr4	+	117516354	117517696	True	NM_152402,NR_031737	chr4,chr4	-,+	TRAM1L1,MIR1973	489096,-295535
chr11:33032330-33033929	chr11	+	33032443	33033539	True	NM_139160,NM_001077242,NM_001326	chr11,chr11,chr11	+,+,-	DEPDC7,DEPDC7,CSTF3	4188,3870,149560
chr1:16061045-16061412	chr1	+	16061091	16061413	True	NM_001089591,NM_001013641,NM_207348	chr1,chr1,chr1	-,+,+	UQCRHL,TMEM82,SLC25A34	72831,7503,1395
chr12:48356385-48357095	chr12	+	48356681	48357075	True	NM_001143841,NM_001844,NM_001143843,NM_001143842,NM_024056	chr12,chr12,chr12,chr12,chr12	+,-,+,+,+	TMEM106C,COL2A1,TMEM106C,TMEM106C,TMEM106C	254,41260,254,254,254
chr4:4251385-4252820	chr4	+	4251601	4252827	True	NM_032927,NM_145291	chr4,chr4	-,+	TMEM128,ZBTB49	-1667,39096
chr3:71777962-71779196	chr3	+	71778233	71779140	True	NM_001134650,NM_001134651,NM_018971	chr3,chr3,chr3	-,-,+	EIF4E3,EIF4E3,GPR27	36,-3707,24060
chrX:47075231-47076784	chrX	+	47075439	47076757	True	NM_033018,NR_024235,NM_006201,NM_001170460	chrX,chrX,chrX,chrX	+,-,+,+	CDK16,NDUFB11,CDK16,CDK16	770,-70830,1318,5659
chrX:302277-302564	chrY	+	252317	252387	False	NR_027232,NM_013239	chrY,chrY	+,-	NCRNA00107,PPP2R3B	-20983,45353
chrX:302277-302564	chrX	+	302317	302387	True	NR_027232,NM_013239	chrX,chrX	+,-	NCRNA00107,PPP2R3B	-20983,45353
chr4:88345707-88346122	chr4	+	88345784	88346119	True	NM_198038,NM_024047,NM_016245	chr4,chr4,chr4	+,+,-	NUDT9,NUDT9,HSD17B11	-2100,-2100,-33329
chr10:69647666-69648203	chr10	+	69647766	69648135	True	NM_201262,NM_001142498,NM_012238	chr10,chr10,chr10	-,+,+	DNAJC12,SIRT1,SIRT1	-49829,-2885,-3397
chr12:48494923-48495927	chr12	+	48495196	48495795	True	NM_014554,NM_001166686	chr12,chr12	-,+	SENP1,PFKM	3909,3860
chr1:144519514-144519968	chr1	+	144519534	144519868	True	NR_024584,NM_001037675	chr1,chr1	-,+	LOC728875,NBPF9	2151,95090
chr1:144519514-144519968	chr1	+	144339401	144339619	False	NR_024584,NM_001037675,NR_024510,NR_024511	chr1,chr1,chr1,chr1	-,+,-,-	LOC728875,NBPF9,LOC728855,LOC728855	2186,275339,1204,1204
chr1:144519514-144519968	chr1	+	147930599	147930817	False	NM_001097616,NR_027468	chr1,chr1	+,-	GPR89C,FLJ39739	-505083,1213
chr1:144519514-144519968	chr1	-	149577606	149577824	False	NM_001024599,NR_024510	chr1,chr1	-,+	HIST2H2BF,LOC728855	-178377,-1204
chrX:100642945-100643502	chrX	+	100643157	100643542	True	NM_000061,NM_021029,NM_001199974,NM_001199972,NM_001199973	chrX,chrX,chrX,chrX,chrX	-,+,+,+,+	BTK,RPL36A,RPL36A-HNRNPH2,RPL36A,RPL36A-HNRNPH2	-1945,2335,2335,2335,2335
chr17:46893919-46894146	chr17	+	46893923	46894093	True	NM_005831,NM_001130918	chr17,chr17	+,-	CALCOCO2,TTLL6	14278,426
chr16:66969973-66971961	chr16	+	66969979	66971858	True	NM_016062,NM_003869,NM_198061,NR_036684,NR_024525	chr16,chr16,chr16,chr16,chr16	-,+,+,+,-	FAM96B,CES2,CES2,CES2,FAM96B	-1659,-1683,-1683,-1656,-1659
chr2:43020800-43022491	chr2	+	43020800	43022094	True	NM_020744,NM_012205	chr2,chr2	+,-	MTA3,HAAO	-225181,-1049
chr5:15499764-15500116	chr5	+	15499874	15500118	True	NM_054027,NM_012304	chr5,chr5	-,+	ANKH,FBXL7	-627987,186
chr13:103346850-103348072	chr13	+	103346909	103348115	True	NM_003291,NM_001010977	chr13,chr13	+,-	TPP2,METTL21C	-97691,-55
chr11:35965966-35966263	chr11	+	35966212	35966286	True	NM_174902,NM_001101653	chr11,chr11	+,-	LDLRAD3,COMMD9	-651,344763
chr4:175235765-175236136	chr4	+	175235796	175236137	True	NM_012180,NM_001145314	chr4,chr4	-,+	FBXO8,KIAA1712	-30394,-30798
chr5:40902648-40904627	chr5	+	40902984	40904672	True	NM_000587,NM_000997	chr5,chr5	+,-	C7,RPL37	4926,-67597
chr6:167412699-167413008	chr6	+	167412802	167412984	True	NR_037504,NM_194429,NM_007045	chr6,chr6,chr6	-,+,+	MIR3939,FGFR1OP,FGFR1OP	-1402,-37,-37
chr5:180649607-180650079	chr5	+	180649636	180650124	True	NM_033549,NM_033342,NM_201627	chr5,chr5,chr5	+,-,+	TRIM41,TRIM7,TRIM41	181,-17459,181
chr17:42404079-42404326	chr17	+	42404107	42404296	True	NM_001143780,NM_001144825,NM_016016,NM_002087	chr17,chr17,chr17,chr17	-,+,-,+	SLC25A39,RUNDC3A,SLC25A39,GRN	-1890,-18232,-1890,18194
chr4:99580559-99581089	chr4	+	99580588	99581118	True	NM_005723,NM_015143	chr4,chr4	-,+	TSPAN5,METAP1	-776,335669
chr17:8114410-8115210	chr17	+	8114486	8115004	True	NM_004217,NR_037447	chr17,chr17	-,+	AURKB,MIR3676	-603,-24044
chr19:54676329-54676746	chr19	+	54676393	54676737	True	NM_001145303,NM_144686,NM_024075	chr19,chr19,chr19	-,-,+	TMC4,TMC4,TSEN34	257,257,17381
chr2:27533054-27534591	chr2	+	27533365	27534635	True	NM_003353,NM_187841	chr2,chr2	-,+	UCN,TRIM54	-2235,-28119
chr15:25455544-25455749	chr15	+	25455553	25455735	True	NR_003315,NR_003314,NR_003313,NR_003312,NR_003311,NR_003310,NR_003496,NR_022010,NR_003495,NR_003309,NM_130838,NR_003342,NR_003343,NR_003307	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,+,-,+,+,+	SNORD115-23,SNORD115-22,SNORD115-21,SNORD115-20,SNORD115-19,SNORD115-18,HBII-52-27,PAR4,SNORD115-24,SNORD115-17,UBE3A,SNORD115-25,SNORD115-26,SNORD115-15	1207,-539,-4195,-4195,-6100,-6100,9914,1103,3070,-6100,194968,4952,8028,-4195
chr7:1568476-1569022	chr7	+	1568840	1568940	True	NM_002360,NM_001080453	chr7,chr7	+,-	MAFK,INTS1	1427,-24822
chr6:6009253-6009526	chr6	+	6009282	6009516	True	NM_016588,NM_004271	chr6,chr6	-,+	NRN1,LY86	-1649,579417
chr17:77480963-77481240	chr17	+	77481018	77481092	True	NM_178543,NM_001082575	chr17,chr17	+,-	ENPP7,RBFOX3	223789,-2455
chr18:71815290-71815963	chr18	+	71815437	71815988	True	NM_014177,NM_152676,NM_001142958	chr18,chr18,chr18	+,-,-	C18orf55,FBXO15,FBXO15	15,-438,-337
chr7:128550900-128552049	chr7	+	128551047	128552043	True	NM_199349,NM_001098629,NM_001135914	chr7,chr7,chr7	-,+,-	KCP,IRF5,KCP	-274,25950,-274
chr3:50346037-50347853	chr3	+	50346937	50347389	True	NM_153282,NM_153283,NM_033159,NM_153281,NM_153285,NM_007312,NM_153215	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,-,-,+	HYAL1,HYAL1,HYAL1,HYAL1,HYAL1,HYAL1,C3orf45	-5933,-5933,-5933,2477,-5933,-5933,-30478
chr14:81714930-81715385	chr14	+	81715164	81715296	True	NM_201595,NM_000369	chr14,chr14	-,+	GTF2A1,TSHR	-27589,-293354
chr10:119131165-119132983	chr10	+	119131626	119132972	True	NM_173791,NM_003054	chr10,chr10	-,+	PDZD8,SLC18A2	2016,-131093
chr1:21997634-21998625	chr1	+	21997644	21998505	True	NM_002885,NM_001145657,NM_001013693	chr1,chr1,chr1	-,-,+	RAP1GAP,RAP1GAP,LDLRAD2	-1788,-1788,140252
chr16:1660906-1661165	chr16	+	1660986	1661134	True	NM_020825,NM_014714	chr16,chr16	+,-	CRAMP1L,IFT140	3506,1025
chr2:39142616-39143447	chr2	+	39142844	39143472	True	NM_001145451,NM_198963	chr2,chr2	+,-	ARHGEF33,DHX57	3031,-39823
chr1:212798496-212799409	chr1	+	212798625	212799325	True	NM_153606,NM_018664	chr1,chr1	+,-	FAM71A,BATF3	-887,74052
chr17:38597209-38597451	chr17	+	38597254	38597496	True	NM_001552,NM_001067	chr17,chr17	+,-	IGFBP4,TOP2A	2179,-23052
chr6:36098370-36098605	chr6	+	36098369	36098429	True	NM_002754,NM_052961	chr6,chr6	+,-	MAPK13,SLC26A8	-158,-105956
chr20:18037746-18037955	chr20	+	18037886	18037982	True	NM_021220,NM_001164811	chr20,chr20	-,+	OVOL2,PET117	589,80516
chr22:35884086-35884286	chr22	+	35884163	35884335	True	NM_005368,NM_014310	chr22,chr22	-,+	MB,RASD2	129099,53016
chr17:21530373-21531920	chr17	+	21530431	21531779	True	NM_001113434,NM_001194958	chr17,chr17	-,+	C17orf51,KCNJ18	-75490,-222034
chr19:49558396-49559221	chr19	+	49558692	49559060	True	NM_033183,NM_006179,NM_033043,NM_033142	chr19,chr19,chr19,chr19	-,-,+,-	CGB8,NTF4,CGB5,CGB7	-6324,8114,-11641,-13
chr20:62695279-62695539	chr20	+	62695470	62695562	True	NM_198723,NM_018419,NM_003195	chr20,chr20,chr20	+,-,+	TCEA2,SOX18,TCEA2	-7082,-14491,-1511
chr7:66459640-66460168	chr7	+	66459746	66459977	True	NM_018264,NM_016038	chr7,chr7	+,-	TYW1,SBDS	1839,662
chr22:43012159-43012410	chr22	+	43012388	43012458	True	NM_178136,NR_029422,NM_032311	chr22,chr22,chr22	-,+,-	POLDIP3,RNU12,POLDIP3	-1426,-1188,-1426
chr7:134345128-134346675	chr7	+	134345260	134346710	True	NM_001628,NM_199186	chr7,chr7	-,+	AKR1B1,BPGM	-201372,-13787
chr1:223903015-223903370	chr1	+	223903026	223903418	True	NM_001143962,NM_001748	chr1,chr1	-,+	CAPN8,CAPN2	-49590,-2958
chr21:33782068-33782312	chr21	+	33782067	33782181	True	NM_058187,NM_014825	chr21,chr21	+,-	C21orf63,URB1	2570,-16755
chr15:25683952-25684191	chr15	+	25683957	25684171	True	NM_130839,NR_001295	chr15,chr15	-,+	UBE3A,SNORD109A	7,-160518
chr14:68142736-68143168	chr14	+	68142836	68143130	True	NM_006370,NM_152443	chr14,chr14	-,+	VTI1B,RDH12	-1234,25472
chr22:23871857-23872308	chr22	+	23871899	23872339	True	NM_153615,NM_020070	chr22,chr22	+,-	RGL4,IGLL1	160708,50206
chr17:79603394-79603626	chr17	+	79603461	79603641	True	NM_017921,NM_031945	chr17,chr17	-,+	NPLOC4,TSPAN10	547,5707
chr22:30440564-30442310	chr22	+	30440688	30441912	True	NM_152510,NM_002309	chr22,chr22	+,-	HORMAD2,LIF	34540,200941
chr5:7851341-7852467	chr5	+	7851468	7852494	True	NM_001089584,NM_002454	chr5,chr5	-,+	C5orf49,MTRR	-204,16722
chr3:50345519-50346037	chr3	+	50345522	50345592	True	NM_001200016,NM_001200029,NM_012191,NM_003549,NM_153282,NM_153283,NM_033159,NM_153281,NM_001200018,NM_153285,NM_007312,NM_001200030,NM_153215,NM_001200031,NM_001200032	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,-,-,-,-,-,-,-,-,+,-,-	NAT6,HYAL3,NAT6,HYAL3,HYAL1,HYAL1,HYAL1,HYAL1,NAT6,HYAL1,HYAL1,HYAL3,C3orf45,HYAL3,HYAL3	-8670,-9229,-8670,-8623,-4518,-4518,-4518,4274,-9202,-4518,-4518,-8623,-29055,-8623,-8623
chr19:5720638-5720854	chr19	+	5720643	5720805	True	NM_004793,NM_152784	chr19,chr19	-,+	LONP1,TMEM146	-467,-6
chr6:154825411-154825644	chr6	+	154825415	154825655	True	NM_173515,NM_014892	chr6,chr6	-,+	CNKSR3,SCAF8	6148,228856
chr3:56835463-56835744	chr3	+	56835483	56835717	True	NM_019555,NR_024460	chr3,chr3	-,+	ARHGEF3,CCDC66	328,-244350
chr15:75941389-75941675	chr15	+	75941440	75941652	True	NM_153271,NM_018285	chr15,chr15	+,-	SNX33,IMP3	-143,-8776
chr4:110758439-110759022	chr4	+	110758596	110758852	True	NM_000204,NM_006583	chr4,chr4	-,+	CFI,RRH	-35261,-9508
chr17:44346754-44347994	chr17_ctg5_hap1	-	518063	519018	False	NM_001193465,NM_014834	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	KIAA1267,LRRC37A	44479,-59459
chr17:44346754-44347994	chr17_ctg5_hap1	+	1214267	1214912	False	NR_026901,NR_037772	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LOC644172,CRHR1	-25886,-43814
chr17:44346754-44347994	chr17	+	44346954	44347909	True	NM_001193465,NM_014834	chr17,chr17	-,+	KIAA1267,LRRC37A	-44214,24587
chr7:6682325-6682607	chr7	+	6682454	6682646	True	NM_017560,NM_006956	chr7,chr7	+,-	ZNF853,ZNF12	-26978,63970
chr10:47404822-47405188	chr10	+	47404954	47405211	True	NR_024495,NR_027634	chr10,chr10	-,+	LOC642826,FAM35B2	-161460,-25291
chr10:47404822-47405188	chr10	+	88935070	88935136	False	NM_005271,NM_001099338	chr10,chr10	-,+	GLUD1,FAM22A	-80294,50068
chr10:47404822-47405188	chr10	+	46922886	46923143	False	NR_027632,NM_181519	chr10,chr10	+,-	FAM35B,SYT15	-25302,47508
chr12:113625452-113625944	chr12	+	113625674	113625828	True	NM_024072,NM_001111322,NM_032848	chr12,chr12,chr12	-,-,+	DDX54,DDX54,C12orf52	-2390,-2390,-2177
chr12:75600963-75601224	chr12	+	75601006	75601228	True	NM_153748,NM_152779,NM_139136,NM_139137	chr12,chr12,chr12,chr12	-,+,-,-	KCNC2,GLIPR1L1,KCNC2,KCNC2	2333,127234,2333,2333
chr7:73870416-73870733	chr7	+	73870426	73870726	True	NM_016328,NM_001199207,NM_005685,NM_181471	chr7,chr7,chr7,chr7	+,+,+,-	GTF2IRD1,GTF2IRD1,GTF2IRD1,RFC2	-2357,-2357,-2357,-201688
chr7:63696364-63697821	chr7	+	63696737	63697712	True	NM_178558,NM_153363	chr7,chr7	-,+	ZNF680,ZNF679	325843,-7944
chr22:35548638-35549802	chr22	+	35548752	35549723	True	NM_001008494,NM_005368	chr22,chr22	+,-	ISX,MB	-86673,463712
chr1:36555587-36557326	chr1	+	36555731	36557348	True	NM_017825,NM_005202,NM_014466	chr1,chr1,chr1	+,-,+	ADPRHL2,COL8A2,TEKT2	-1336,8552,-6113
chr9:116136622-116137302	chr9	+	116136689	116137131	True	NM_017688,NM_031219	chr9,chr9	+,-	BSPRY,HDHD3	-24928,1260
chr2:176866365-176866581	chr2	+	176866370	176866614	True	NM_030650,NM_000523	chr2,chr2	-,+	KIAA1715,HOXD13	454,90917
chr21:45195348-45195708	chr21	+	45195401	45195717	True	NM_000100,NM_003683	chr21,chr21	-,+	CSTB,RRP1	592,13700
chr13:76123606-76123851	chr13	+	76123618	76123870	True	NM_203497,NM_006002	chr13,chr13	-,+	COMMD6,UCHL3	-11627,56
chr14:71778222-71778562	chr14	+	71778221	71778305	True	NR_001276,NM_033141	chr14,chr14	+,-	SNORD56B,MAP3K9	86748,-502333
chr4:48988799-48989143	chr4	+	48988821	48989097	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-609,-80006
chrY:14505733-14507156	chrY	+	14506091	14507173	True	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	267124,26266
chr19:40852592-40853156	chr19	+	40852772	40853153	True	NM_012268,NM_001031696,NM_178830	chr19,chr19,chr19	+,+,-	PLD3,PLD3,C19orf47	1178,1178,1191
chr3:45432235-45432831	chr3	+	45432466	45432709	True	NM_015444,NM_015340	chr3,chr3	-,+	TMEM158,LARS2	-164652,-2451
chr19:35519237-35519749	chr19	+	35519241	35519639	True	NM_001037,NM_199037,NM_175872	chr19,chr19,chr19	+,+,-	SCN1B,SCN1B,ZNF792	1952,1952,-64288
chr12:57397621-57398574	chr12	+	57397678	57398454	True	NM_007264,NM_014830	chr12,chr12	+,-	GPR182,ZBTB39	-9374,1895
chr16:66612911-66613125	chr16	+	66612966	66613094	True	NM_144673,NM_001199317,NM_004614	chr16,chr16,chr16	+,+,-	CMTM2,CMTM2,TK2	256,256,-28651
chr1:161378719-161380027	chr1	+	161378728	161379754	True	NM_001136219,NM_001013625,NM_003001	chr1,chr1,chr1	+,-,+	FCGR2A,C1orf192,SDHC	95450,-41064,-94613
chr3:57263832-57265016	chr3	+	57264153	57264654	True	NM_012096,NM_003865	chr3,chr3	+,-	APPL1,HESX1	-2440,-29873
chr5:169011126-169011868	chr5	+	169011134	169011758	True	NM_017785,NM_003062	chr5,chr5	+,-	CCDC99,SLIT3	-547,-283001
chr20:61297801-61298082	chr20	+	61297829	61298111	True	NM_016354,NR_024470	chr20,chr20	+,-	SLCO4A1,LOC100127888	-24083,-20
chr11:67776407-67777067	chr11	+	67776439	67776839	True	NM_001030010,NM_030930,NM_000694,NM_001161473	chr11,chr11,chr11,chr11	+,-,+,+	ALDH3B1,UNC93B1,ALDH3B1,ALDH3B1	950,-4846,950,-442
chr16:88726541-88726975	chr16	+	88726662	88726787	True	NM_002461,NM_000101,NR_024399,NR_024402	chr16,chr16,chr16,chr16	-,-,+,+	MVD,CYBA,MGC23284,MGC23284	2759,-9205,2993,2993
chr8:107682352-107684334	chr8	+	107682438	107684292	True	NM_139166,NM_181354	chr8,chr8	-,+	ABRA,OXR1	98238,-12459
chr2:11684635-11685031	chr2	+	11684637	11684945	True	NR_003095,NM_033090,NM_148903	chr2,chr2,chr2	-,+,+	E2F6,GREB1,GREB1	-78340,-1837,-4608
chr9:129563434-129564580	chr9	+	129563765	129564632	True	NM_014007,NM_001135776,NM_012098	chr9,chr9,chr9	+,+,-	ZBTB43,ZBTB43,ANGPTL2	2652,2652,320465
chr2:99068495-99068981	chr2	+	99068623	99068941	True	NM_001008215,NM_001134225,NM_001134224,NM_001566,NM_004027	chr2,chr2,chr2,chr2,chr2	-,+,+,+,+	C2orf64,INPP4A,INPP4A,INPP4A,INPP4A	156066,-7353,-7353,-7353,-7353
chr1:151254533-151254762	chr1	+	151254682	151254744	True	NM_020832,NM_001198773	chr1,chr1	+,-	ZNF687,PI4KB	46,45439
chr5:92907763-92907993	chr5	+	92907762	92907920	True	NR_021490,NR_021491,NR_015369,NM_005654	chr5,chr5,chr5,chr5	-,-,-,+	FLJ42709,FLJ42709,FLJ42709,NR2F1	9133,9083,-1263,11122
chr14:103019445-103019760	chr14	+	103019481	103019605	True	NM_152326,NR_036192	chr14,chr14	-,+	ANKRD9,MIR4309	-43353,-13551
chr15:40641486-40641723	chr15	+	40641584	40641746	True	NM_001145643,NM_207380,NM_033510	chr15,chr15,chr15	+,-,+	PHGR1,C15orf52,DISP2	1487,-8416,8687
chr7:38313207-38314975	chr7	+	38313437	38314937	True	NM_001003806,NM_032016,NM_001003799	chr7,chr7,chr7	-,+,-	TARP,STARD3NL,TARP	-189,-95556,-189
chr3:50630797-50631450	chr3	+	50630800	50631136	True	NM_013324,NM_004635	chr3,chr3	-,+	CISH,MAPKAPK3	18186,23464
chr13:31481659-31483448	chr13	+	31481858	31483406	True	NM_006644,NM_032849	chr13,chr13	-,+	HSPH1,C13orf33	252761,-1598
chr7:44363488-44364076	chr7	+	44363727	44364013	True	NM_172078,NM_172079,NM_172081,NM_172080,NM_172083,NM_172082,NM_172084,NM_001220,NM_006555	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,-,-,-,+	CAMK2B,CAMK2B,CAMK2B,CAMK2B,CAMK2B,CAMK2B,CAMK2B,CAMK2B,YKT6	1267,1267,1267,1267,1267,1267,1267,1267,-123200
chr19:3367931-3369481	chr19	+	3368092	3369503	True	NM_005597,NM_001136503,NM_205843	chr19,chr19,chr19	+,-,+	NFIC,C19orf77,NFIC	-1570,111087,-8527
chr19:2739178-2739578	chr19	+	2739187	2739477	True	NM_003249,NM_213568,NM_144564	chr19,chr19,chr19	+,-,-	THOP1,SLC39A3,SLC39A3	46028,647,647
chr5:101631988-101632234	chr5	+	101632094	101632250	True	NM_000919,NM_180991	chr5,chr5	+,-	PAM,SLCO4C1	569276,53
chr10:30023269-30024050	chr10	+	30023279	30023934	True	NM_003174,NR_003930	chr10,chr10	-,+	SVIL,LOC387647	846,-324829
chr11:61974699-61975479	chr11	+	61974857	61975136	True	NM_206998,NM_002407	chr11,chr11	-,+	SCGB1D4,SCGB2A1	91457,1003
chr5:170772508-170772744	chr5	+	170772509	170772773	True	NM_021025,NR_037474	chr5,chr5	+,-	TLX3,MIR3912	-36272,41041
chr6:35749921-35750366	chr6	+	35749992	35750311	True	NM_001010886,NM_207409,NM_001832	chr6,chr6,chr6	+,+,-	C6orf127,C6orf126,CLPS	-1212,-5651,14844
chr3:150675602-150677135	chr3	+	150675788	150677033	True	NR_024066,NM_052995,NM_001195794	chr3,chr3,chr3	+,-,-	CLRN1OS,CLRN1,CLRN1	13431,-13765,13803
chr12:86214844-86215565	chr12	+	86215027	86215605	True	NM_006183,NM_005447	chr12,chr12	+,-	NTS,RASSF9	52467,14763
chr12:132567298-132567764	chr12	+	132567364	132567752	True	NM_175066,NR_003290	chr12,chr12	-,+	DDX51,EP400NL	61178,1075
chr15:56364136-56365579	chr15	+	56364144	56365257	True	NM_198524,NM_006154	chr15,chr15	+,-	TEX9,NEDD4	292386,-78309
chr11:111750006-111751528	chr11	+	111750007	111750744	True	NM_138378,NM_001077690,NM_001077691,NM_001077692,NM_022761,NM_024740	chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,+,-	FDXACB1,ALG9,ALG9,ALG9,C11orf1,ALG9	-66,-7702,-8003,-8003,-110,-7702
chr19:52228977-52229308	chr19	+	52229171	52229307	True	NM_001523,NR_024330	chr19,chr19	-,+	HAS1,NCRNA00085	-1950,-32629
chr10:94968228-94968564	chr10	+	94968257	94968509	True	NM_013451,NM_000783	chr10,chr10	-,+	MYOF,CYP26A1	273615,-134662
chr11:57435080-57435436	chr11	+	57435085	57435445	True	NM_145008,NM_015457,NM_001142597,NM_006831	chr11,chr11,chr11,chr11	-,+,+,+	YPEL4,ZDHHC5,CLP1,CLP1	-17668,28,-9920,-9920
chr9:95738756-95738977	chr9	+	95738758	95738956	True	NM_031486,NM_033086	chr9,chr9	-,+	ZNF484,FGD3	-98468,-2091
chr11:122936456-122937510	chr11	+	122936461	122937000	True	NR_027288,NM_153201,NM_006597	chr11,chr11,chr11	+,-,-	LOC341056,HSPA8,HSPA8	-48251,-3617,-3617
chr12:8761074-8762783	chr12	+	8761338	8762611	True	NM_020661,NM_020734	chr12,chr12	-,+	AICDA,RIMKLB	2890,87906
chr16:57480317-57480910	chr16	+	57480396	57480808	True	NM_020313,NM_020312	chr16,chr16	-,+	CIAPIN1,COQ9	611,528
chr1:43615824-43617794	chr1	+	43615898	43617563	True	NM_001101376,NM_006824	chr1,chr1	+,-	FAM183A,EBNA1BP2	-2362,20473
chr8:91374167-91374369	chr8	+	91374224	91374406	True	NM_004929,NM_001359	chr8,chr8	-,+	CALB1,DECR1	-279117,-360695
chr7:36194505-36194768	chr7	+	36194646	36194766	True	NM_030636,NM_001199707	chr7,chr7	+,-	EEPD1,KIAA0895	-1861,212066
chr2:216949988-216950313	chr2	+	216950134	216950314	True	NM_018441,NM_001142312,NM_138390,NM_001142310,NM_001142311	chr2,chr2,chr2,chr2,chr2	-,+,+,+,+	PECR,TMEM169,TMEM169,TMEM169,TMEM169	-3595,-3602,-3602,-3602,-3602
chr11:811245-811543	chr11	+	811318	811425	True	NM_001004,NM_145887,NR_002585,NM_145886,NM_020376	chr11,chr11,chr11,chr11,chr11	+,-,+,-,+	RPLP2,LRDD,SNORA52,LRDD,PNPLA2	-1442,-6068,255,-6068,7475
chr8:70415187-70416644	chr8	+	70415232	70416395	True	NM_001128206,NM_001146009	chr8,chr8	+,-	SULF1,SLCO5A1	-10255,329070
chr7:27155950-27156487	chr7	+	27155957	27156485	True	NM_030661,NR_002795	chr7,chr7	-,+	HOXA3,HOXA11-AS1	2779,68541
chr9:116357044-116357484	chr9	+	116357143	116357531	True	NM_017443,NM_144489	chr9,chr9	-,+	POLE3,RGS3	-184114,-994
chr2:233242837-233243314	chr2	+	233243123	233243263	True	NR_028501,NM_001632	chr2,chr2	-,+	ECEL1P2,ALPP	8541,84
chr7:100664675-100665263	chr7	+	100664889	100665265	True	NM_003378,NM_001040105	chr7,chr7	-,+	VGF,MUC17	143637,-1576
chrX:122996106-122996559	chrX	+	122996380	122996451	True	NM_001167,NM_001204401,NR_037916,NM_001081550	chrX,chrX,chrX,chrX	+,+,+,-	XIAP,XIAP,XIAP,THOC2	-2414,-2769,-2414,-129476
chr19:35608128-35609023	chr19	+	35608283	35608983	True	NM_001136012,NM_001136010,NM_001136011,NM_021910,NR_024562,NM_001136009,NM_001136008,NM_001136007,NM_005971	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,-,+,+,+,+	FXYD3,FXYD3,FXYD3,FXYD3,LOC100128675,FXYD3,FXYD3,FXYD3,FXYD3	-1602,-1602,-1602,-1602,-11075,-1602,-1602,-1602,-1602
chr4:1721132-1722120	chr4	+	1721316	1722140	True	NM_001127266,NM_006527,NM_006342,NM_138385	chr4,chr4,chr4,chr4	-,-,+,-	TMEM129,SLBP,TACC3,TMEM129	994,-7286,1125,994
chr1:196865108-196866398	chr1	+	196865195	196866192	True	NM_001994,NM_006684,NM_001201550,NM_001201551	chr1,chr1,chr1,chr1	-,+,+,+	F13B,CFHR4,CFHR4,CFHR4	170264,-8112,-8112,-8112
chr19:57997398-57999103	chr19	+	57997759	57999149	True	NM_024691,NM_001144068,NM_001098491,NM_001098493,NM_001098492,NM_001098495,NM_001098494,NM_001098496,NM_001024596	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+,+,+,-	ZNF419,ZNF772,ZNF419,ZNF419,ZNF419,ZNF419,ZNF419,ZNF419,ZNF772	-71,-8821,-71,-71,-71,-71,-71,-71,-8821
chr6:126108147-126109772	chr6	+	126108295	126109667	True	NM_001199620,NM_001199621,NM_016063,NM_181782,NM_001122842,NM_001199619	chr6,chr6,chr6,chr6,chr6,chr6	+,+,-,+,+,+	NCOA7,NCOA7,HDDC2,NCOA7,NCOA7,NCOA7	-6040,2241,-485013,2241,2241,-6040
chr11:76496164-76496483	chr11	+	76496184	76496455	True	NM_015516,NR_024042	chr11,chr11	+,-	TSKU,GUCY2E	-1951,-63351
chr11:9336444-9336874	chr11	+	9336458	9336870	True	NM_006391,NM_001165030,NM_015012,NR_028491	chr11,chr11,chr11,chr11	+,-,-,-	IPO7,TMEM41B,TMEM41B,TMEM41B	69298,-162,-162,-162
chr12:132378064-132378954	chr12	+	132378157	132378503	True	NM_175066,NM_003565	chr12,chr12	-,+	DDX51,ULK1	250431,775
chr20:44278397-44280204	chr20	+	44278663	44280012	True	NM_147197,NM_147198,NM_080753	chr20,chr20,chr20	-,-,+	WFDC11,WFDC9,WFDC10A	18924,-18756,-20338
chr12:53170998-53171447	chr12	+	53171060	53171355	True	NM_199187,NM_015848	chr12,chr12	+,-	KRT18,KRT76	171299,-25
chr17:73872659-73873199	chr17	+	73872723	73873193	True	NM_033452,NM_001080419	chr17,chr17	-,+	TRIM47,UNK	1513,-92093
chr1:151041354-151042074	chr1	+	151041401	151042061	True	NM_001038707,NM_144618,NM_006818,NM_020239	chr1,chr1,chr1,chr1	-,+,+,-	CDC42SE1,GABPB2,MLLT11,CDC42SE1	-9276,1018,-9315,-9276
chr10:101373675-101374968	chr10	+	101373680	101374753	True	NM_020354,NM_031212	chr10,chr10	+,-	ENTPD7,SLC25A28	44509,5519
chr13:103250161-103250864	chr13	+	103250192	103250900	True	NM_003291,NM_001010977	chr13,chr13	+,-	TPP2,METTL21C	-964,96008
chr16:68575493-68576159	chr16	+	68575547	68576089	True	NM_133458,NM_018667	chr16,chr16	+,-	ZFP90,SMPD3	-1937,-93138
chr5:176941823-176943373	chr5	+	176942025	176943249	True	NM_001144875,NM_001174102,NM_024872,NM_001144876,NM_016222	chr5,chr5,chr5,chr5,chr5	-,+,-,-,-	DOK3,PRR7,DOK3,DOK3,DDX41	-4598,-66750,-5167,-4598,768
chr14:69263265-69263573	chr14	+	69263326	69263560	True	NM_207442,NM_004926,NM_001193360	chr14,chr14,chr14	-,-,+	C14orf181,ZFP36L1,EXD2	-136,-3541,394633
chr14:50358677-50359180	chr14	+	50358843	50359215	True	NM_004713,NM_001663	chr14,chr14	-,+	NEMF,ARF6	-39304,520
chr22:24180705-24180906	chr22	+	24180719	24180945	True	NM_198440,NM_001002862,NM_001024938,NM_001135751	chr22,chr22,chr22,chr22	-,-,+,-	DERL3,DERL3,SLC2A11,DERL3	304,304,18113,304
chr21:46975833-46976075	chr21	+	46975837	46975979	True	NM_130444,NM_194255	chr21,chr21	+,-	COL18A1,SLC19A1	-100464,-13452
chr22:35619368-35619814	chr22	+	35619496	35619815	True	NM_001003681,NM_005368	chr22,chr22	+,-	HMGXB4,MB	33629,393620
chr14:103986815-103987088	chr14	+	103986860	103986966	True	NM_152307,NM_001823	chr14,chr14	+,-	TRMT61A,CKB	8542,2254
chr19:19624413-19624823	chr19	+	19624513	19624731	True	NM_032037,NM_015965	chr19,chr19	-,+	TSSK6,NDUFA13	1788,2287
chr4:103436560-103438162	chr4	+	103436785	103438193	True	NM_003998,NM_001135146	chr4,chr4	+,-	NFKB1,SLC39A8	-14361,-170130
chr3:11686051-11686918	chr3	+	11686455	11686660	True	NM_001128219,NM_003178	chr3,chr3	-,+	VGLL4,SYN2	-1057,359201
chr4:155505916-155506757	chr4	+	155505933	155506779	True	NM_021871,NM_005141,NM_000508	chr4,chr4,chr4	-,+,-	FGA,FGB,FGA	5168,-21860,5168
chr11:67237457-67238637	chr11	+	67237906	67238224	True	NM_001078651,NM_001078650,NM_025124,NM_003977	chr11,chr11,chr11,chr11	-,-,-,+	TMEM134,TMEM134,TMEM134,AIP	-1175,-1175,-1175,12280
chr13:19919538-19920344	chr13	+	19919794	19920360	True	NR_034026,NR_027248	chr13,chr13	+,-	LOC100287114,ANKRD26P3	-656,-681
chr20:61993529-61994189	chr20	+	61993792	61994144	True	NM_020882,NM_000744	chr20,chr20	+,-	COL20A1,CHRNA4	-69305,-1097
chr2:99919201-99920024	chr2	+	99919503	99920065	True	NM_174898,NM_015904	chr2,chr2	-,+	LYG1,EIF5B	-1864,33768
chr7:106681079-106681952	chr7	+	106681438	106681876	True	NM_002736,NM_175884	chr7,chr7	+,-	PRKAR2B,FLJ36031	3301,-379804
chr9:114243640-114245061	chr9	+	114244141	114245041	True	NM_001080398,NM_133464	chr9,chr9	-,+	KIAA0368,ZNF483	2043,42405
chr6:109461386-109461892	chr6	+	109461428	109461941	True	NM_014454,NM_173830	chr6,chr6	-,+	SESN1,CEP57L1	-45720,-10978
chr14:55476830-55477253	chr14	+	55477005	55477263	True	NM_001008396,NM_080867	chr14,chr14	-,+	WDHD1,SOCS4	16608,16580
chr4:87946754-87947279	chr4	+	87946901	87947166	True	NM_144645,NM_005935	chr4,chr4	-,+	C4orf36,AFF1	-133326,-18799
chr3:11624241-11624531	chr3	+	11624274	11624544	True	NM_006395,NM_001128220	chr3,chr3	+,-	ATG7,VGLL4	-310315,-438
chr10:74919966-74921350	chr10	+	74920268	74921217	True	NM_173348,NR_024203,NM_007265,NM_001135752,NM_001135753	chr10,chr10,chr10,chr10,chr10	+,-,-,-,-	FAM149B1,ECD,ECD,ECD,ECD	6659,6693,6693,6693,6693
chr11:125034641-125034937	chr11	+	125034640	125034712	True	NM_001080546,NM_022062	chr11,chr11	-,+	TMEM218,PKNOX2	-61435,-132
chr18:3452593-3452846	chr18	+	3452599	3452850	True	NM_019856,NM_173211,NM_173210,NM_003244,NM_170695,NM_173208,NM_173209,NM_173207	chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18	-,+,+,+,+,+,+,+	MYOM1,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1	-232493,921,-1060,-2479,-1060,-2620,-2678,-5043
chr7:105921241-105922895	chr7	+	105921530	105922948	True	NM_152750,NM_005746	chr7,chr7	+,-	CDHR3,NAMPT	-317924,2747
chr1:84544258-84545507	chr1	+	84544298	84545345	True	NM_207578,NM_024686,NM_002731	chr1,chr1,chr1	+,-,+	PRKACB,TTLL7,PRKACB	-604,-79465,-604
chr20:589880-590283	chr20	+	589910	590180	True	NM_004609,NM_031229	chr20,chr20	-,+	TCF15,RBCK1	780,-201252
chr10:22256134-22257598	chr10	+	22256396	22257371	True	NM_012071,NM_022365	chr10,chr10	+,-	COMMD3,DNAJC1	347940,35330
chr15:69744213-69744492	chr15	+	69744286	69744528	True	NR_030714,NM_213725,NM_001003	chr15,chr15,chr15	-,+,+	MIR629,RPLP1,RPLP1	627329,630,630
chr18:56702004-56702286	chr18	+	56702011	56702141	True	NR_024021,NM_013435	chr18,chr18	+,-	LOC390858,RAX	829,238540
chr3:52724369-52725877	chr3	+	52724584	52725471	True	NR_003047,NM_018313,NR_003687,NM_014366,NR_003057,NM_206825,NM_206826	chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,-,+,+,+,+,+	SNORD19,PBRM1,SNORD19B,GNL3,SNORD69,GNL3,GNL3	-1389,-4718,109,-4709,1280,-4709,-4709
chr11:14539938-14541624	chr11	+	14540011	14541569	True	NM_001143937,NM_002786,NM_000922	chr11,chr11,chr11	-,-,+	PSMA1,PSMA1,PDE3B	472,472,123699
chr4:2011042-2011260	chr4	+	2011047	2011285	True	NM_005663,NM_001168243	chr4,chr4	-,+	WHSC2,C4orf48	-88,32434
chr17:27370179-27371917	chr17	+	27370524	27371950	True	NM_016518,NM_004740	chr17,chr17	+,-	PIPOX,TIAF1	-658,30727
chr1:207098971-207100058	chr1	+	207099039	207100107	True	NM_005449,NM_001142473,NM_006850,NM_001193338	chr1,chr1,chr1,chr1	-,-,+,-	FAIM3,FAIM3,IL24,FAIM3	-3661,-3661,-28302,-3804
chr22:33197963-33198370	chr22	+	33198336	33198398	True	NM_003490,NM_000362	chr22,chr22	-,+	SYN3,TIMP3	204458,-1585
chr12:53241450-53241716	chr12	+	53241494	53241740	True	NM_173352,NM_199187	chr12,chr12	-,+	KRT78,KRT18	1088,100914
chr9:89758171-89758830	chr9	+	89758175	89758867	True	NR_036691,NM_001001709	chr9,chr9	-,+	LOC494127,C9orf170	-58035,4691
chr2:231729967-231730423	chr2	+	231729972	231730469	True	NM_001012516,NM_030926,NM_001012514,NM_005683	chr2,chr2,chr2,chr2	+,+,+,-	ITM2C,ITM2C,ITM2C,GPR55	-402,-402,-402,59522
chr13:88325878-88326700	chr13	+	88325971	88326732	True	NM_015567,NR_033829	chr13,chr13	+,-	SLITRK5,LOC642345	-1152,-2753
chr15:76281243-76282745	chr15	+	76281662	76282783	True	NM_138573,NM_152335	chr15,chr15	-,+	NRG4,C15orf27	22052,69515
chr1:54516821-54517583	chr1	+	54516858	54517599	True	NM_153035,NM_004872	chr1,chr1	+,-	TCEANC2,TMEM59	1674,1568
chr2:73617108-73617989	chr2	+	73617107	73617873	True	NM_001965,NM_015120	chr2,chr2	-,+	EGR4,ALMS1	-96278,-4276
chr11:89732539-89733962	chr11	+	89732859	89733736	True	NM_001195234,NR_028346,NM_001136486	chr11,chr11,chr11	+,-,+	TRIM49L2,TRIM53,TRIM64	30537,1992,-31240
chr11:89732539-89733962	chr11	-	89577104	89577981	False	NM_001164397,NR_028346	chr11,chr11	-,+	TRIM64B,TRIM53	31256,-1992
chr2:20789956-20790240	chr2	+	20790021	20790195	True	NM_022460,NM_182828	chr2,chr2	-,+	HS1BP3,GDF7	60719,76228
chr16:1343696-1344888	chr16	+	1343968	1344646	True	NM_194261,NM_001001410	chr16,chr16	+,-	UBE2I,C16orf42	14533,57277
chr17:34121074-34121340	chr17	+	34121126	34121210	True	NM_001032278,NM_024302,NM_139215	chr17,chr17,chr17	-,-,+	MMP28,MMP28,TAF15	1480,1480,15277
chr11:70995237-70996491	chr11	+	70995527	70996441	True	NM_018161,NM_012309	chr11,chr11	+,-	NADSYN1,SHANK2	167775,-59719
chr22:30162610-30162945	chr22	+	30162642	30162910	True	NM_001003692,NM_019103,NM_001003684,NM_013387	chr22,chr22,chr22,chr22	-,-,+,+	ZMAT5,ZMAT5,UQCR10,UQCR10	109,109,447,447
chr12:50221005-50221313	chr12	+	50221012	50221352	True	NM_001037806,NR_027500,NR_027501,NR_027499	chr12,chr12,chr12,chr12	-,+,+,+	NCKAP5L,LOC100286844,LOC100286844,LOC100286844	906,973,973,973
chr20:37066992-37068520	chr20	+	37067512	37068345	True	NR_002986,NR_002972,NR_015366,NR_027241,NR_003239,NR_003017,NR_003018	chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,+,-,-,+,-,-	SNORA60,SNORA39,LOC388796,LOC388796,SNHG11,SNORA71C,SNORA71D	9666,8380,-3550,-3494,6951,-9065,-4870
chr7:131245753-131246152	chr7	+	131245849	131246009	True	NM_001018111,NM_005397,NM_013255	chr7,chr7,chr7	-,-,+	PODXL,PODXL,MKLN1	-4473,-4473,-233305
chr5:159430994-159431505	chr5	+	159431279	159431457	True	NM_003314,NM_052927	chr5,chr5	+,-	TTC1,PWWP2A	4722,115050
chr10:90768670-90769820	chr10	+	90768713	90769833	True	NR_028036,NR_028371	chr10,chr10	+,-	FAS,FAS-AS1	-18484,-15981
chr1:16939417-16939693	chr1	+	16939455	16939675	True	NR_027504,NM_017940	chr1,chr1	+,-	MST1P2,NBPF1	32393,357
chr12:6657266-6657573	chr12	+	6657266	6657338	True	NM_001039670,NM_001193457,NM_080730,NR_036467,NM_002046	chr12,chr12,chr12,chr12,chr12	-,-,-,-,+	IFFO1,IFFO1,IFFO1,IFFO1,GAPDH	7961,7961,7961,7961,-13660
chr2:174829411-174829651	chr2	+	174829552	174829618	True	NM_003111,NM_001145250,NM_001017371,NM_001172712	chr2,chr2,chr2,chr2	-,+,-,-	SP3,SP9,SP3,SP3	862,370202,-605,862
chr11:68080891-68081605	chr11	+	68081055	68081627	True	NM_022338,NM_002335	chr11,chr11	-,+	C11orf24,LRP5	-41586,-1006
chr15:72410920-72411809	chr15	+	72411095	72411813	True	NM_145204,NM_006901,NM_001172109,NM_001166340,NM_001172111,NM_001172110	chr15,chr15,chr15,chr15,chr15,chr15	+,-,+,+,+,+	SENP8,MYO9A,SENP8,SENP8,SENP8,SENP8	-516,-673,-1955,-4548,-516,-1901
chr1:11537356-11538185	chr1	+	11537397	11538203	True	NM_012168,NM_020780	chr1,chr1	-,+	FBXO2,PTCHD2	176735,1091
chr4:39700086-39700364	chr4	+	39700088	39700324	True	NM_005339,NM_174921,NM_001111112,NM_001111113	chr4,chr4,chr4,chr4	+,-,+,+	UBE2K,C4orf34,UBE2K,UBE2K	-475,-59607,-475,-475
chr3:50314788-50315119	chr3	+	50315000	50315097	True	NM_006764,NM_153215	chr3,chr3	-,+	IFRD2,C3orf45	14982,1420
chr11:2483997-2484360	chr11	+	2484002	2484126	True	NM_181798,NM_014555	chr11,chr11	+,-	KCNQ1,TRPM5	-1369,-39727
chr5:70750527-70750882	chr5	+	70750570	70750749	True	NM_018429,NR_033968	chr5,chr5	+,-	BDP1,LOC100049076	692,-195448
chr1:48290442-48291423	chr1	+	48290464	48291378	True	NM_001194986,NM_004474	chr1,chr1	-,+	LOC388630,FOXD2	171234,-388829
chrX:96138672-96139977	chrX	+	96138948	96139932	True	NR_003539,NM_013347	chrX,chrX	-,+	LOC643486,RPA4	-546047,-96
chr14:93674020-93674378	chr14	+	93674112	93674296	True	NM_001100417,NM_175748,NM_032490	chr14,chr14,chr14	+,+,-	UBR7,UBR7,C14orf142	-770,-770,-653
chr13:52419141-52419381	chr13	+	52419141	52419329	True	NR_027047,NR_027048,NM_031290	chr13,chr13,chr13	-,-,+	NCRNA00282,NCRNA00282,CCDC70	7,7,16787
chr10:45641029-45641677	chr10	+	45641076	45641694	True	NR_033891,NR_024472	chr10,chr10	+,-	LOC338579,LOC100133308	8415,8400
chr2:232328713-232328952	chr2	+	232328716	232328954	True	NR_002921,NM_005381,NR_004398,NM_145236,NR_002908	chr2,chr2,chr2,chr2,chr2	-,-,-,+,-	SNORA75,NCL,SNORD82,B3GNT7,SNORD20	-8069,301,-3563,-68432,-7482
chr5:6634294-6634608	chr5	+	6634544	6634606	True	NM_017755,NR_037947,NM_001193455,NM_001047	chr5,chr5,chr5,chr5	-,-,-,+	NSUN2,NSUN2,NSUN2,SRD5A1	-1071,-1071,-1071,-1095
chr19:37409706-37410594	chr19	+	37409966	37410610	True	NM_001037232,NM_001171979,NM_001204838,NM_001204839,NM_198539,NM_001204835,NM_001204836,NM_001204837	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,+,+,+,+,+,+	ZNF829,ZNF829,ZNF568,ZNF568,ZNF568,ZNF568,ZNF568,ZNF568	-2773,-3043,-2787,-2787,-2787,-2787,-2787,-2787
chr4:78744114-78744464	chr4	+	78744218	78744306	True	NM_020236,NM_144571	chr4,chr4	+,-	MRPL1,CNOT6L	39498,-3674
chr17:35656553-35658386	chr17	+	35656882	35658420	True	NM_198837,NM_198838,NM_173625	chr17,chr17,chr17	-,-,+	ACACA,ACACA,C17orf78	-190,-190,74564
chr1:155163652-155164017	chr1	+	155163764	155163828	True	NM_001204287,NM_001204286,NM_001204285,NM_001204297,NM_001204290,NM_001204291,NM_001204292,NM_001204293,NM_002456,NM_001204296,NM_001204289,NM_001204288,NM_001044393,NM_001044392,NM_001044391,NM_001044390,NR_030281,NM_001018017,NM_001018016,NM_001204295,NM_001204294	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,+,-,-,-,-	MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MUC1,MIR92B,MUC1,MUC1,MUC1,MUC1	-1058,-1058,-1058,-1058,-1058,-1058,-1058,-1058,-1058,-1058,-1058,-1058,-1058,-1058,-1058,-1058,1139,-1058,-1058,-1058,-1058
chr5:147470148-147472107	chr5	+	147470149	147471825	True	NM_006846,NM_206966	chr5,chr5	+,-	SPINK5,C5orf46	-26677,-184048
chr17:21516992-21517272	chr17	+	21517103	21517267	True	NM_001113434,NM_001194958	chr17,chr17	-,+	C17orf51,KCNJ18	-62162,-208706
chr9:19202938-19203678	chr9	+	19203368	19203524	True	NR_038064,NM_017925	chr9,chr9	-,+	PLIN2,DENND4C	-75764,87224
chr10:70587766-70587982	chr10	+	70587811	70587879	True	NM_152709,NM_001130159,NM_001130161,NM_001130162,NM_152707,NM_001130160	chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,-,+	STOX1,STOX1,STOX1,STOX1,SLC25A16,STOX1	-568,-568,-568,-299,-300531,-568
chr10:70587766-70587982	chr10	+	70587475	70587543	False	NM_152709,NM_001130159,NM_001130161,NM_001130162,NM_152707,NM_001130160	chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,-,+	STOX1,STOX1,STOX1,STOX1,SLC25A16,STOX1	-232,-232,-232,19,-300195,-232
chr5:32313365-32313900	chr5	+	32313365	32313565	True	NM_001040446,NM_006713	chr5,chr5	-,+	MTMR12,SUB1	-251,272039
chr1:249152574-249153106	chr1	+	249152675	249153069	True	NM_001193328,NM_001136036,NM_024836	chr1,chr1,chr1	-,-,+	ZNF692,ZNF692,ZNF672	296,106,-20196
chr8:124537051-124538556	chr8	+	124537334	124538438	True	NM_148177,NM_018024	chr8,chr8	-,+	FBXO32,WDYHV1	5995,-108420
chr11:33760872-33761813	chr11	+	33761161	33761682	True	NM_203329,NM_203330,NM_203331,NM_012194,NM_000611	chr11,chr11,chr11,chr11,chr11	-,-,-,+,-	CD59,CD59,CD59,C11orf41,CD59	-3136,-3136,-3136,-197350,-3136
chr6:20540345-20541982	chr6	+	20540618	20541783	True	NM_017774,NM_001080480	chr6,chr6	+,-	CDKAL1,MBOAT1	-5981,-327948
chr12:76653567-76654499	chr12	+	76653588	76654536	True	NM_015336,NM_024685	chr12,chr12	+,-	ZDHHC17,BBS10	503317,87736
chr1:11540308-11540608	chr1	+	11540345	11540563	True	NM_012168,NM_020780	chr1,chr1	-,+	FBXO2,PTCHD2	174375,-1101
chr4:646200-646540	chr4	+	646222	646571	True	NM_007100,NM_001145292	chr4,chr4	-,+	ATP5I,PDE6B	21607,394
chr12:102513176-102513573	chr12	+	102513210	102513563	True	NM_017915,NM_024057	chr12,chr12	+,-	C12orf48,NUP37	392,-849
chr1:225636303-225637140	chr1	+	225636488	225637178	True	NM_194442,NM_001130440	chr1,chr1	-,+	LBR,SRP9	-19931,328336
chr1:24830824-24831919	chr1	+	24831127	24831689	True	NM_001199012,NM_013441	chr1,chr1	-,+	C1orf201,RCAN3	-89540,-1798
chr2:62906497-62908167	chr2	+	62906686	62907978	True	NM_198276,NM_001142615	chr2,chr2	-,+	TMEM17,EHBP1	-173082,-5757
chrX:152937547-152937788	chrX	+	152937573	152937697	True	NM_001142805,NM_001039582,NM_001135740	chrX,chrX,chrX	+,-,-	SLC6A8,PNCK,PNCK	16054,2169,1096
chr21:35882877-35883201	chr21	+	35882948	35883152	True	NM_000219,NM_058182	chr21,chr21	-,+	KCNE1,FAM165B	511,-135250
chr6:56028579-56029246	chr6	+	56028842	56029288	True	NM_152731,NM_030820	chr6,chr6	+,-	BEND6,COL21A1	790484,83140
chr2:8977776-8978040	chr2	+	8977879	8978059	True	NM_020738,NM_002166	chr2,chr2	-,+	KIDINS220,ID2	-124,-155823
chr19:58515241-58516829	chr19	+	58515337	58516865	True	NR_036508,NM_025027	chr19,chr19	+,-	LOC100128398,ZNF606	-1126,-623
chr3:113774979-113775366	chr3	+	113774981	113775361	True	NM_020817,NM_024638	chr3,chr3	-,+	KIAA1407,QTRTD1	149,249
chr2:31030273-31031753	chr2	+	31030329	31031769	True	NM_144575,NM_001002257	chr2,chr2	-,+	CAPN13,LCLAT1	-18,-360243
chr11:65778760-65779279	chr11	+	65778947	65779251	True	NM_003860,NM_001143985,NM_001323,NM_032325	chr11,chr11,chr11,chr11	+,+,+,-	BANF1,BANF1,CST6,EIF1AD	-9448,-9448,210,-9369
chr2:86251375-86251980	chr2	+	86251385	86251991	True	NM_017952,NR_026984	chr2,chr2	+,-	PTCD3,LOC90784	81313,-394
chr2:48009481-48009908	chr2	+	48009551	48009875	True	NM_025133,NM_000179	chr2,chr2	-,+	FBXO11,MSH6	106033,345
chr17:292983-293329	chr17	+	293020	293304	True	NM_182705,NM_001013672	chr17,chr17	-,+	FAM101B,C17orf97	2477,-32953
chr16:73123295-73124012	chr16	+	73123295	73123897	True	NM_001164766,NR_027756	chr16,chr16	-,+	ZFHX3,HTA	-30761,2350
chr4:25529873-25530193	chr4	+	25530021	25530188	True	NM_015187,NM_001177998	chr4,chr4	-,+	SEL1L3,SLC34A2	334473,127246
chrX:117959239-117959719	chrX	+	117959297	117959747	True	NM_173798,NM_020721	chrX,chrX	+,-	ZCCHC12,KIAA1210	-1561,324845
chr16:2389148-2389716	chr16	+	2389176	2389763	True	NR_003574,NM_001089	chr16,chr16	+,-	ABCA17P,ABCA3	1159,1034
chr7:40175754-40176450	chr7	+	40175912	40176226	True	NM_024728,NM_001193311,NM_001193312,NM_001193313,NM_138701	chr7,chr7,chr7,chr7,chr7	+,+,+,+,-	C7orf10,C7orf10,C7orf10,C7orf10,C7orf11	-1389,-1389,-1389,-1389,-1661
chr20:30005985-30006353	chr20	+	30006108	30006341	True	NR_002577,NM_001171832	chr20,chr20	+,-	DEFB122,DEFB121	2900,-5467
chrX:77166107-77167072	chrX	+	77166228	77166962	True	NM_000052,NM_032121	chrX,chrX	+,-	ATP7A,MAGT1	-85,-15163
chr5:59966065-59967363	chr5	+	59966434	59967348	True	NR_028509,NM_001145208	chr5,chr5	+,-	PART1,DEPDC1B	-182740,28695
chr4:48772747-48774329	chr4	+	48772859	48774346	True	NM_001079840,NM_015030	chr4,chr4	+,-	OCIAD1,FRYL	58713,8020
chr2:173598419-173599808	chr2	+	173598461	173599753	True	NR_026995,NM_007023	chr2,chr2	-,+	LOC91149,RAPGEF4	1231,771
chr1:220702342-220702598	chr1	+	220702415	220702625	True	NM_012414,NM_018650	chr1,chr1	-,+	RAB3GAP2,MARK1	-256572,-898
chr10:43919146-43919457	chr10	+	43919280	43919371	True	NR_026693,NM_001098204	chr10,chr10	+,-	ZNF487P,HNRNPF	13202,-14584
chr3:79069696-79070901	chr3	+	79069958	79070778	True	NM_001128929,NM_001145845,NM_133631	chr3,chr3,chr3	+,-,-	ROBO2,ROBO1,ROBO1	-1922847,-1349,-1349
chr12:8090172-8091549	chr12	+	8090339	8091406	True	NM_006931,NM_018416	chr12,chr12	-,+	SLC2A3,FOXJ2	-1447,93952
chr4:570780-571358	chr4	+	571020	571104	True	NM_000283,NM_133474	chr4,chr4	+,-	PDE6B,ZNF721	48258,-77578
chr10:60338211-60339258	chr10	+	60338330	60339254	True	NM_001080512,NM_152230	chr10,chr10	+,-	BICC1,IPMK	-65477,-310636
chr18:47009533-47011172	chr18	+	47009667	47011161	True	NM_001199341,NM_001199356,NM_001199343,NM_001199355,NM_001199345,NM_001199344,NR_031720,NM_001035006,NM_001035005,NM_001199346,NM_000985,NM_001199342,NM_001199340,NR_002571,NR_002572,NR_002573,NR_003701	chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18	-,-,-,-,-,-,+,-,-,-,-,-,-,-,-,-,-	RPL17,RPL17-C18ORF32,RPL17,RPL17-C18ORF32,RPL17,RPL17,MIR1539,RPL17,C18orf32,C18orf32,RPL17,RPL17,RPL17,SNORD58A,SNORD58B,U58,SNORD58C	7730,7831,7730,6850,7831,7730,2581,7831,2540,2540,7831,7730,7831,6613,6995,4574,4590
chr22:43342894-43343806	chr22	+	43343043	43343809	True	NM_001197,NM_007229	chr22,chr22	+,-	BIK,PACSIN2	162947,4
chr19:3882229-3883100	chr19	+	3882228	3883119	True	NM_001145640,NM_033064	chr19,chr19	-,+	ZFR2,ATCAY	-13201,-1661
chr12:105380442-105381323	chr12	+	105380621	105381357	True	NM_152318,NM_032148	chr12,chr12	+,-	C12orf45,SLC41A2	-574,-58149
chr4:4862466-4862983	chr4	+	4862519	4862920	True	NM_002448,NM_018659	chr4,chr4	+,-	MSX1,CYTL1	-1178,158328
chr15:91479779-91480875	chr15	+	91479816	91480245	True	NM_018671,NM_198527,NM_001039675	chr15,chr15,chr15	+,-,+	UNC45A,HDDC3,UNC45A	-1664,-4042,-6469
chr2:84682472-84683878	chr2	+	84683169	84683744	True	NM_003849,NM_001370	chr2,chr2	-,+	SUCLG1,DNAH6	2900,59834
chr10:134352056-134352739	chr10	+	134352170	134352643	True	NM_005539,NM_173575	chr10,chr10	+,-	INPP5A,STK32C	-868,-230693
chr6:99878098-99878763	chr6	+	99878265	99878762	True	NM_032870,NM_015491,NM_001195131	chr6,chr6,chr6	-,-,+	SFRS18,SFRS18,LOC100130890	-5058,-5058,90107
chr2:128283339-128283630	chr2	+	128283339	128283568	True	NM_017969,NM_001080527	chr2,chr2	-,+	IWS1,MYO7B	570,9809
chr8:145689626-145690035	chr8	+	145689667	145690033	True	NM_145754,NM_138496,NM_032687,NM_001129888	chr8,chr8,chr8,chr8	+,-,-,-	KIFC2,CYHR1,CYHR1,CYHR1	1704,435,866,1048
chr9:139657628-139657965	chr9	+	139657840	139657918	True	NM_178469,NM_203347,NR_033913	chr9,chr9,chr9	-,-,+	LCN8,LCN15,LOC100128593	-5109,1097,-17278
chr5:34914602-34915110	chr5	+	34914749	34915087	True	NR_026591,NM_018321,NM_002853	chr5,chr5,chr5	-,+,-	RAD1,BRIX1,RAD1	694,732,743
chr11:134120364-134121456	chr11	+	134120383	134121473	True	NM_001037304,NM_001037305,NM_199297,NM_014384,NM_014174,NM_199298	chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,+,-,-	THYN1,THYN1,THYN1,ACAD8,THYN1,THYN1	1838,1838,1838,1960,1838,1838
chr1:46087586-46087967	chr1	+	46087736	46087996	True	NM_001190182,NM_001114938,NM_152298	chr1,chr1,chr1	-,-,+	CCDC17,CCDC17,NASP	1785,1785,-38127
chr5:167912247-167912629	chr5	+	167912301	167912461	True	NM_002887,NR_029520	chr5,chr5	+,-	RARS,MIR103-1	1001,75577
chr7:130080020-130080619	chr7	+	130080196	130080560	True	NM_177524,NM_018718	chr7,chr7	+,-	MEST,TSGA14	45485,344
chr11:47591655-47593069	chr11	+	47591787	47593089	True	NM_001143984,NR_024222,NM_016506,NM_004551,NM_175732,NM_018095	chr11,chr11,chr11,chr11,chr11,chr11	+,-,-,+,+,-	PTPMT1,KBTBD4,KBTBD4,NDUFS3,PTPMT1,KBTBD4	-4856,7528,7482,7472,-4856,7528
chrY:1283031-1283471	chrY	+	1283443	1283517	True	NM_022148,NM_001161531,NM_001012288	chrY,chrY,chrY	-,+,-	CRLF2,CSF2RA,CRLF2	-1913,54175,-1916
chrY:1283031-1283471	chrX	+	1333443	1333517	False	NM_022148,NM_001161531,NM_001012288	chrX,chrX,chrX	-,+,-	CRLF2,CSF2RA,CRLF2	-1913,54175,-1916
chr22:18776543-18777591	chr22	+	18776660	18777149	True	NM_005675,NR_003267	chr22,chr22	+,-	DGCR6,GGT3P	116586,2382
chr22:18776543-18777591	chr22	+	21577771	21578260	False	NR_024583,NR_002829	chr22,chr22	+,-	POM121L8P,P2RX6P	58453,-179233
chr6:168593803-168594247	chr6	+	168593948	168594182	True	NM_030615,NM_024919	chr6,chr6	+,-	KIF25,FRMD1	-175446,-114109
chr11:67406960-67407468	chr11	+	67407060	67407158	True	NM_007103,NM_181843,NM_005995	chr11,chr11,chr11	+,-,-	NDUFV1,NUDT8,TBX10	-32788,-9659,-29
chrX:20136750-20138402	chrX	+	20136841	20138387	True	NM_152780,NM_001173456,NM_001168465,NM_001168466,NM_001168467	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	MAP7D2,PDHA1,MAP7D2,MAP7D2,MAP7D2	-1727,-774889,-1727,-1727,-2085
chr3:125496658-125497056	chr3	+	125496901	125497091	True	NR_024250,NR_031687	chr3,chr3	+,-	LOC100125556,MIR548I1	138352,12354
chr19:38718832-38719124	chr19	+	38718832	38718997	True	NM_001135156,NM_004647,NM_001135155,NM_001166103	chr19,chr19,chr19,chr19	-,-,-,+	DPF1,DPF1,DPF1,SPINT2	1370,-3942,-3942,36100
chr6:31874686-31875916	chr6_qbl_hap6	+	3168728	3169054	False	NM_025256,NM_001178063,NM_181842,NM_006709	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	-,+,-,-	EHMT2,C2,ZBTB12,EHMT2	-9473,-6213,-5165,-9473
chr6:31874686-31875916	chr6_mcf_hap5	+	3254817	3255143	False	NM_025256,NM_001178063,NM_181842,NM_006709	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	-,+,-,-	EHMT2,C2,ZBTB12,EHMT2	-9473,-6211,-5165,-9473
chr6:31874686-31875916	chr6_cox_hap2	+	3384694	3385020	False	NM_025256,NM_001178063,NM_181842,NM_006709	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	-,+,-,-	EHMT2,C2,ZBTB12,EHMT2	-9476,-6217,-5171,-9476
chr6:31874686-31875916	chr6	+	31874939	31875265	True	NM_025256,NM_001178063,NM_181842,NM_006709	chr6,chr6,chr6,chr6	-,+,-,-	EHMT2,C2,ZBTB12,EHMT2	-9475,-6216,-5170,-9475
chr6:31874686-31875916	chr6_dbb_hap3	+	3160522	3160848	False	NM_025256,NM_001178063,NM_181842,NM_006709	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	-,+,-,-	EHMT2,C2,ZBTB12,EHMT2	-9476,-6217,-5171,-9476
chr6:33560927-33561173	chr6	+	33560991	33561157	True	NR_027908,NR_028361	chr6,chr6	-,+	C6orf227,GGNBP1	8,-9566
chr6:150323821-150324294	chr6	+	150323909	150324192	True	NR_024045,NM_025218	chr6,chr6	-,+	RAET1K,ULBP1	2141,-38817
chr1:205412165-205412867	chr1	+	205412185	205412861	True	NM_002596,NR_029893	chr1,chr1	+,-	CDK18,MIR135B	60822,4715
chr3:52093313-52093760	chr3	+	52093327	52093789	True	NM_001198898,NR_027331,NM_001947	chr3,chr3,chr3	+,-,-	ACY1,C3orf74,DUSP7	-76078,5389,-2866
chr9:114421366-114423095	chr9	+	114421375	114422693	True	NM_001017998,NR_034087,NM_001198664	chr9,chr9,chr9	+,-,+	GNG10,C9orf29,GNG10	1157,-45542,1157
chr22:42371676-42372234	chr22	+	42371716	42371922	True	NM_024053,NM_145733,NM_019106	chr22,chr22,chr22	-,+,+	CENPM,SEPT3,SEPT3	-28568,1008,1008
chr11:63684991-63685361	chr11	+	63684990	63685171	True	NM_024771,NM_173587	chr11,chr11	+,-	NAA40,RCOR2	21270,-674
chr1:14087332-14087933	chr1	+	14087470	14087963	True	NM_001007257,NM_001010847	chr1,chr1	+,-	PRDM2,LRRC38	-11645,-247228
chr7:24798243-24799883	chr7	+	24798265	24799840	True	NM_004403,NM_016447,NM_001127453,NM_001127454	chr7,chr7,chr7,chr7	-,+,-,-	DFNA5,MPP6,DFNA5,DFNA5	-626,-185240,-1182,-626
chr4:3766547-3767131	chr4	+	3766630	3767110	True	NM_000683,NR_034136	chr4,chr4	+,-	ADRA2C,LOC100133461	1185,-87048
chr12:125477594-125478067	chr12	+	125477654	125478033	True	NM_032656,NM_080626	chr12,chr12	-,+	DHX37,BRI3BP	-3987,160
chr19:36545488-36545722	chr19	+	36545524	36545627	True	NM_001083961,NM_152658,NM_173636	chr19,chr19,chr19	+,-,+	WDR62,THAP8,WDR62	155,93,155
chr19:1353904-1354269	chr19	+	1354069	1354135	True	NR_024247,NM_000156,NM_032853	chr19,chr19,chr19	+,-,+	MUM1,GAMT,MUM1	2187,47467,840
chr7:25726634-25727806	chr7	+	25726636	25727594	True	NR_029597,NM_004289	chr7,chr7	-,+	MIR148A,NFE2L3	262062,464252
chr1:92493515-92494052	chr1	+	92493882	92493943	True	NM_001195684,NM_173567	chr1,chr1	-,+	TGFBR3,EPHX4	-122323,1589
chr17:48472685-48472995	chr17	+	48472801	48472977	True	NM_152463,NM_018509	chr17,chr17	+,-	EME1,LRRC59	-22272,1987
chr4:8455149-8457146	chr4	+	8455210	8456574	True	NM_152544,NM_003501	chr4,chr4	+,-	METTL19,ACOX3	-12729,-12758
chr9:136396937-136397223	chr9	+	136396947	136397123	True	NM_014694,NM_001080483,NM_001145320	chr9,chr9,chr9	+,-,+	ADAMTSL2,TMEM8C,ADAMTSL2	2851,-6879,162
chr17:30594099-30594497	chr17	+	30594208	30594452	True	NM_022344,NM_138328	chr17,chr17	-,+	C17orf75,RHBDL3	74787,-1065
chr17:37784174-37785424	chr17	+	37784301	37785327	True	NM_006160,NM_006804,NM_001165937,NM_181505,NM_001165938,NM_032192	chr17,chr17,chr17,chr17,chr17,chr17	-,+,+,+,+,+	NEUROD2,STARD3,STARD3,PPP1R1B,STARD3,PPP1R1B	-20126,8005,8005,-7,8005,-1173
chr17:38218103-38218383	chr17	+	38218157	38218368	True	NM_014815,NM_001079518,NM_199334,NM_001190919,NM_001190918,NM_003250	chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,+,+,+	MED24,MED24,THRA,THRA,THRA,THRA	-7268,-7268,699,77,699,699
chr8:124781107-124781321	chr8	+	124781256	124781344	True	NM_004306,NM_144963	chr8,chr8	-,+	ANXA13,FAM91A1	-31609,-425
chr15:50473245-50474321	chr15	+	50473334	50474233	True	NM_003645,NM_001159629,NM_024837	chr15,chr15,chr15	+,+,-	SLC27A2,SLC27A2,ATP8B4	159,159,-61915
chr1:45140129-45140348	chr1	+	45140288	45140352	True	NM_001145636,NM_024587	chr1,chr1	+,-	C1orf228,TMEM53	41,-189
chr2:189639667-189640256	chr2	+	189639863	189640291	True	NM_052952,NM_000090	chr2,chr2	-,+	DIRC1,COL3A1	14592,198807
chr3:46906258-46906754	chr3	+	46906288	46906754	True	NM_000316,NM_000258	chr3,chr3	+,-	PTH1R,MYL3	12481,-1315
chr5:169760718-169761809	chr5	+	169760791	169761857	True	NR_026945,NM_005565	chr5,chr5	+,-	LOC257358,LCP2	-2407,-35969
chr12:22212050-22213442	chr12	+	22212322	22213143	True	NM_018686,NM_020298	chr12,chr12	+,-	CMAS,ABCC9	-13221,-122694
chr11:59189494-59190057	chr11	+	59189584	59190032	True	NM_001004728,NM_001001954	chr11,chr11	+,-	OR5A1,OR5A2	20609,446
chr2:113831201-113832854	chr2	+	113831378	113832784	True	NM_032556,NM_173161,NM_173178	chr2,chr2,chr2	+,+,-	IL1F10,IL1F10,IL1F8	-1535,-5883,-20938
chr4:69515641-69516039	chr4_ctg9_hap1	+	228555	228643	False	NM_014058,NM_001076	chr4_ctg9_hap1,chr4_ctg9_hap1	+,-	TMPRSS11E,UGT2B15	-85527,20368
chr4:69515641-69516039	chr4	+	69515966	69516054	True	NM_001075,NM_001076	chr4,chr4	+,-	UGT2B10,UGT2B15	165658,20370
chr9:125562006-125562781	chr9	+	125562234	125562682	True	NM_080859,NM_005388	chr9,chr9	+,-	OR1K1,PDCL	-3,28303
chr5:99870474-99871063	chr5	+	99870688	99871056	True	NR_027503,NM_198507	chr5,chr5	-,+	LOC100133050,FAM174A	-146730,67
chr13:48805530-48805751	chr13	+	48805530	48805722	True	NM_014166,NM_021999	chr13,chr13	-,+	MED4,ITM2B	-136290,1551
chr9:94898141-94898831	chr9	+	94898298	94898832	True	NR_015444,NM_178324,NR_027341	chr9,chr9,chr9	+,-,+	LOC100128076,SPTLC1,C9orf44	-3233,-20608,4916
chr17:40085028-40086812	chr17	+	40085222	40086649	True	NM_198830,NM_031421,NM_001096	chr17,chr17,chr17	-,+,-	ACLY,TTC25,ACLY	-9950,238,-9950
chr19:16180949-16181311	chr19	+	16181001	16181357	True	NM_001145160,NM_003290,NM_054113	chr19,chr19,chr19	+,+,-	TPM4,TPM4,CIB3	-2735,5777,102979
chr17:58157035-58157279	chr17	+	58157035	58157300	True	NM_000717,NR_030732,NM_022070	chr17,chr17,chr17	+,-,-	CA4,LOC645638,HEATR6	70001,8585,-743
chr7:130419131-130419453	chr7	+	130419292	130419367	True	NM_138693,NR_029899	chr7,chr7	-,+	KLF14,MIR335	-404,-283399
chr10:45406332-45406845	chr10	+	45406332	45406750	True	NR_033842,NM_001123376	chr10,chr10	-,+	LOC220980,TMEM72	48437,13
chr15:41693559-41694033	chr15	+	41693911	41694051	True	NM_016013,NM_015138	chr15,chr15	-,+	NDUFAF1,RTF1	645,15250
chr22:42348398-42349189	chr22	+	42348506	42349162	True	NM_024053,NM_001002876,NR_024355	chr22,chr22,chr22	-,-,+	CENPM,CENPM,LOC339674	-5358,-5358,-366
chr11:77710395-77712014	chr11	+	77710553	77711717	True	NM_003251,NM_033547	chr11,chr11	+,-	THRSP,INTS4	63189,-4836
chr3:49941423-49941957	chr3	+	49941446	49941658	True	NM_001167582,NM_002447	chr3,chr3	+,-	RBM6,MST1R	35818,-140
chr4:26585772-26586109	chr4	+	26585813	26585931	True	NM_018317,NM_000730	chr4,chr4	+,-	TBC1D19,CCKAR	-318,-93771
chr8:145553659-145554272	chr8	+	145553800	145554274	True	NM_024531,NM_012079,NM_031309	chr8,chr8,chr8	+,-,-	GPR172A,DGAT1,SCRT1	27950,-3233,5719
chr12:9911684-9913367	chr12	+	9911792	9913406	True	NR_026671,NM_001781,NR_026672,NM_016523	chr12,chr12,chr12,chr12	-,-,-,+	CD69,CD69,CD69,KLRF1	141,141,141,66670
chr3:147125285-147126401	chr3	+	147125439	147126441	True	NM_001168378,NM_001168379,NM_032153,NM_003412	chr3,chr3,chr3,chr3	-,-,-,+	ZIC4,ZIC4,ZIC4,ZIC1	-3368,-2132,-1032,739
chrX:153627229-153627681	chrX	+	153627288	153627479	True	NM_006013,NM_006730,NR_000011,NR_026898	chrX,chrX,chrX,chrX	+,-,+,+	RPL10,DNASE1L1,SNORA70,RPL10	-768,10151,1142,-768
chr6:117247335-117248556	chr6	+	117247514	117248506	True	NM_148963,NM_173560	chr6,chr6	-,+	GPRC6A,RFX6	-97316,-49196
chr20:61569859-61570125	chr20	+	61569881	61570147	True	NM_033081,NM_017896,NM_022105,NM_080797	chr20,chr20,chr20,chr20	-,+,-,-	DIDO1,C20orf11,DIDO1,DIDO1	-577,-491,-577,-577
chr14:94593438-94594385	chr14	+	94593655	94594146	True	NM_032036,NM_005532	chr14,chr14	-,+	IFI27L2,IFI27	1862,-16627
chr3:66271179-66271411	chr3	+	66271207	66271423	True	NR_028475,NM_001164796,NM_004742	chr3,chr3,chr3	+,+,-	SLC25A26,SLC25A26,MAGI1	-90,-90,-246698
chr2:44225155-44225782	chr2	+	44225271	44225556	True	NM_022437,NM_133259	chr2,chr2	+,-	ABCG8,LRPPRC	-159220,-2127
chr19:11928333-11929456	chr19	+	11928509	11929210	True	NM_152357,NM_001080493	chr19,chr19	+,-	ZNF440,ZNF823	-3453,-78749
chr11:76378335-76378575	chr11	+	76378397	76378597	True	NM_015516,NM_001128922,NM_005512	chr11,chr11,chr11	+,-,-	TSKU,LRRC32,LRRC32	115687,3244,2497
chr13:98792538-98793275	chr13	+	98792707	98793137	True	NM_178861,NM_001001715,NM_005766	chr13,chr13,chr13	-,+,+	RNF113B,FARP1,FARP1	36442,2296,2296
chr22:41869362-41870811	chr22	+	41869516	41870286	True	NM_032758,NM_001098	chr22,chr22	-,+	PHF5A,ACO2	-4808,-4440
chrX:52781020-52781616	chrX	+	52781180	52781542	True	NM_003147,NM_175698,NM_001164417,NM_001009616	chrX,chrX,chrX,chrX	+,+,+,-	SSX2,SSX2,SSX2B,SPANXN5	-932,-932,-932,44896
chrX:52781020-52781616	chrX	-	52735014	52735376	False	NM_003147,NM_175698,NM_001164417	chrX,chrX,chrX	-,-,-	SSX2,SSX2,SSX2B	932,932,932
chr1:153393445-153395102	chr1	+	153393460	153395013	True	NM_001045479,NM_176823	chr1,chr1	-,+	S100A7L2,S100A7A	17541,-4511
chr4:6770024-6771458	chr4	+	6770023	6771489	True	NM_001100590,NM_203462	chr4,chr4	+,-	KIAA0232,MRFAP1L1	12969,-58417
chr2:105858840-105860130	chr2	+	105858919	105859928	True	NM_001142621,NM_007227	chr2,chr2	-,+	TGFBRAP1,GPR45	86271,-770
chr9:134954593-134954991	chr9	+	134954624	134954818	True	NM_032536,NM_004269	chr9,chr9	+,-	NTNG2,MED27	82515,485
chr8:32415218-32416452	chr8	+	32415250	32416318	True	NM_013957,NM_013956,NM_013958,NM_013964,NM_001160008,NM_004495,NM_013960,NM_001160007,NM_001160004,NM_001160005,NM_001160002,NM_032664	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	+,+,+,+,+,+,+,+,+,+,+,-	NRG1,NRG1,NRG1,NRG1,NRG1,NRG1,NRG1,NRG1,NRG1,NRG1,NRG1,FUT10	-9580,-9580,-9580,-9580,-9580,-9580,-9580,-9580,-9580,-9580,-9580,914396
chr13:100738964-100740391	chr13	+	100739221	100740309	True	NM_001127692,NM_001178004,NM_000282,NM_033132	chr13,chr13,chr13,chr13	+,+,+,-	PCCA,PCCA,PCCA,ZIC5	959,959,959,-115043
chr6:55058996-55060489	chr6	+	55059335	55060317	True	NM_001526,NM_001042406	chr6,chr6	+,-	HCRTR2,HMGCLL1	-20328,383759
chr22:42335409-42335717	chr22	+	42335441	42335759	True	NM_024053,NM_001002876,NM_001110215,NR_024355	chr22,chr22,chr22,chr22	-,-,-,+	CENPM,CENPM,CENPM,LOC339674	7439,7439,514,12431
chr5:89699610-89700780	chr5	+	89699915	89700822	True	NM_006467,NM_004365	chr5,chr5	+,-	POLR3G,CETN3	69858,4841
chr9:3527056-3527432	chr9	+	3527121	3527465	True	NM_134428,NM_002919,NR_026663	chr9,chr9,chr9	-,-,+	RFX3,RFX3,C9orf70	-1138,-1138,371180
chr1:150743022-150743661	chr1	+	150743075	150743667	True	NM_001145415,NM_001199739,NM_004079	chr1,chr1,chr1	+,-,-	SETDB1,CTSS,CTSS	155147,-4642,-4642
chr9:139981698-139981986	chr9	+	139981720	139981968	True	NM_207309,NM_016219,NR_027447	chr9,chr9,chr9	+,+,-	UAP1L1,MAN1B1,LOC100289341	-9818,-354,-451
chr9:2289279-2289517	chr9	+	2289278	2289554	True	NM_139045,NR_015375	chr9,chr9	+,-	SMARCA2,FLJ35024	-273987,332869
chr12:6310287-6310541	chr12	+	6310357	6310541	True	NM_001769,NM_000552	chr12,chr12	+,-	CD9,VWF	-926,-76521
chr6:107775409-107777247	chr6	+	107775854	107777159	True	NM_018013,NM_020381	chr6,chr6	+,-	SOBP,PDSS2	34157,3681
chr11:63870937-63871426	chr11	+	63870962	63871434	True	NM_013280,NM_014067	chr11,chr11	+,-	FLRT1,MACROD1	-19,62201
chr4:105412492-105412910	chr4	+	105412810	105412874	True	NM_025212,NM_017628	chr4,chr4	-,+	CXXC4,TET2	-343,654157
chr19:54327273-54327996	chr19	+	54327337	54327861	True	NM_144687,NR_029866	chr19,chr19	-,+	NLRP12,MIR373	-33,-35429
chr16:71392000-71392425	chr16	+	71392074	71392392	True	NM_007088,NR_027910,NM_018348,NM_001740	chr16,chr16,chr16,chr16	+,+,-,+	CALB2,CALB2,FTSJD1,CALB2	223,223,-68565,223
chr6:165724414-165724882	chr6	+	165724438	165724902	True	NM_144980,NR_027284	chr6,chr6	-,+	C6orf118,LOC441177	-1327,676136
chr8:27490625-27490973	chr8	+	27490779	27490991	True	NM_016240,NM_001831,NM_182826	chr8,chr8,chr8	+,-,+	SCARA3,CLU,SCARA3	585,-18452,585
chr1:78958275-78958505	chr1	+	78958287	78958523	True	NM_001039585,NM_000959,NM_003902	chr1,chr1,chr1	+,+,-	PTGFR,PTGFR,FUBP1	-1610,-1610,-513510
chr4:77388241-77388912	chr4	+	77388546	77388927	True	NM_001042784,NM_020859	chr4,chr4	-,+	CCDC158,SHROOM3	-60088,-32344
chr16:1477416-1477652	chr16	+	1477436	1477574	True	NM_001010878,NM_016111	chr16,chr16	-,+	C16orf91,TELO2	1821,65777
chr11:118824897-118825951	chr11	+	118825272	118825639	True	NM_006760,NM_182557	chr11,chr11	+,-	UPK2,BCL9L	1368,-43659
chr7:27778338-27779778	chr7	+	27778606	27779626	True	NM_006024,NM_152740,NM_001079864	chr7,chr7,chr7	+,-,+	TAX1BP1,HIBADH,TAX1BP1	111,-75986,111
chr14:91883329-91883563	chr14	+	91883388	91883606	True	NM_001080414,NR_003709	chr14,chr14	-,+	CCDC88C,SNORA11B	577,-290669
chr10:98261086-98261608	chr10	+	98261141	98261583	True	NM_004088,NM_012465	chr10,chr10	+,-	DNTT,TLL2	-197107,12150
chr14:45551292-45551570	chr14	+	45551351	45551606	True	NM_017922,NM_002013	chr14,chr14	+,-	PRPF39,FKBP3	1695,52181
chr6:111244760-111245028	chr6	+	111244812	111245040	True	NM_138408,NM_015076	chr6,chr6	+,-	GTF3C6,CDK19	34722,-108400
chr1:156339284-156339959	chr1	+	156339374	156339764	True	NR_036565,NM_020407,NR_026549	chr1,chr1,chr1	-,+,+	CCT3,RHBG,RHBG	-31168,-422,-422
chr17:4855911-4856811	chr17	+	4856116	4856782	True	NM_005022,NM_001976,NM_001193503,NM_053013	chr17,chr17,chr17,chr17	-,+,+,+	PFN1,ENO3,ENO3,ENO3	-4291,-1783,-1783,-1783
chr7:23508583-23508821	chr7	+	23508587	23508859	True	NR_026676,NM_006547	chr7,chr7	+,-	RPS2P32,IGF2BP3	21147,1186
chr10:95434265-95435344	chr10	+	95434330	95434950	True	NM_145246,NM_006204	chr10,chr10	-,+	FRA10AC1,PDE6C	27439,-62044
chr6:133073842-133074322	chr6	+	133073864	133074096	True	NR_034175,NR_034174,NM_004665,NR_034173,NM_001016	chr6,chr6,chr6,chr6,chr6	-,-,-,-,+	VNN2,VNN2,VNN2,VNN2,RPS12	4980,4980,4991,4980,61611
chrX:10581399-10581950	chrX	+	10581527	10581968	True	NM_000381,NM_033289,NM_001830	chrX,chrX,chrX	-,-,+	MID1,MID1,CLCN4	6757,6757,-456593
chr6:28879977-28880886	chr6_qbl_hap6	+	183584	184158	False	NM_001195202,NM_006510	chr6_qbl_hap6,chr6_qbl_hap6	+,-	LOC100129636,TRIM27	123238,11069
chr6:28879977-28880886	chr6	+	28880183	28880757	True	NM_001195202,NM_006510	chr6,chr6	+,-	LOC100129636,TRIM27	123242,11069
chr6:28879977-28880886	chr6_ssto_hap7	+	221098	221672	False	NM_001195202,NM_006510	chr6_ssto_hap7,chr6_ssto_hap7	+,-	LOC100129636,TRIM27	123207,11068
chr6:28879977-28880886	chr6_apd_hap1	+	183585	184159	False	NM_001195202,NM_006510	chr6_apd_hap1,chr6_apd_hap1	+,-	LOC100129636,TRIM27	123282,11069
chr6:28879977-28880886	chr6_cox_hap2	+	403207	403781	False	NM_001195202,NM_006510	chr6_cox_hap2,chr6_cox_hap2	+,-	LOC100129636,TRIM27	119038,11073
chr19:42777566-42778215	chr19	+	42777691	42778195	True	NM_006494,NM_015125	chr19,chr19	-,+	ERF,CIC	-18382,10621
chr12:121793567-121794043	chr12	+	121793671	121793743	True	NM_001137559,NM_016237,NM_025126	chr12,chr12,chr12	-,-,+	ANAPC5,ANAPC5,RNF34	-1659,-3406,44158
chr9:70429276-70430306	chr9	+	70429370	70429852	True	NM_199244,NM_201453,NM_001099279	chr9,chr9,chr9	-,+,-	FOXD4L4,CBWD3,FOXD4L2	-44,426986,-44
chr9:70429276-70430306	chr9	-	42717112	42717594	False	NR_026759,NM_199244,NM_001099279	chr9,chr9,chr9	-,+,+	FAM95B1,FOXD4L4,FOXD4L2	315768,44,44
chr9:70429276-70430306	chr9	+	70178454	70178936	False	NM_001126334,NR_024443	chr9,chr9	-,+	FOXD4L5,LOC100133920	-44,-527144
chr22:44356170-44356531	chr22	+	44356181	44356339	True	NM_138814,NM_015380	chr22,chr22	-,+	PNPLA5,SAMM50	-68288,-4971
chr12:864289-864995	chr12	+	864289	864626	True	NM_001184985,NM_016533,NM_018979,NM_213655,NM_014823	chr12,chr12,chr12,chr12,chr12	+,-,+,+,+	WNK1,NINJ2,WNK1,WNK1,WNK1	-2253,-91534,-2253,-2253,-2253
chr8:22438139-22438434	chr8	+	22438180	22438420	True	NR_027715,NM_198042,NM_176871,NM_021630	chr8,chr8,chr8,chr8	-,+,+,+	FLJ14107,PDLIM2,PDLIM2,PDLIM2	61352,-244,-244,-1977
chr10:97522975-97524601	chr10	+	97522974	97524441	True	NM_001164178,NM_001164179,NM_001776,NM_001164183,NM_001164182,NM_001164181,NM_001143973	chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,+,-	ENTPD1,ENTPD1,ENTPD1,ENTPD1,ENTPD1,ENTPD1,TCTN3	-7624,-7360,-7360,-7360,-7360,-7624,-69074
chr6:53524905-53525534	chr6	+	53524933	53525333	True	NM_018214,NM_001003760	chr6,chr6	+,-	LRRC1,KLHL31	134444,5223
chr20:23436097-23436373	chr20	+	23436097	23436335	True	NM_130794,NM_138283,NM_080830	chr20,chr20,chr20	-,+,-	CST11,CSTL1,CST11	-2615,-15828,-2615
chr22:25757770-25758018	chr22	+	25757879	25757939	True	NR_029395,NM_182492	chr22,chr22	+,-	IGLL3P,LRP5L	-43706,635
chr8:95960542-95960767	chr8	+	95960612	95960742	True	NM_152416,NM_001135733,NM_033285	chr8,chr8,chr8	+,-,-	C8orf38,TP53INP1,TP53INP1	76478,923,923
chr21:45140130-45140503	chr21	+	45140383	45140539	True	NM_003681,NM_000100	chr21,chr21	+,-	PDXK,CSTB	-1456,55770
chr15:39873515-39873935	chr15	+	39873594	39873914	True	NM_152597,NM_003246	chr15,chr15	-,+	FSIP1,THBS1	201175,-365
chr17:27333072-27334938	chr17	+	27333254	27334766	True	NM_001098635,NM_178860,NM_016518	chr17,chr17,chr17	-,-,+	SEZ6,SEZ6,PIPOX	-173,-173,35151
chr14:35897135-35898689	chr14	+	35897382	35898361	True	NM_032594,NM_020529	chr14,chr14	+,-	INSM2,NFKBIA	104886,-23422
chr3:14688290-14689843	chr3	+	14688449	14689863	True	NM_016474,NM_001080423	chr3,chr3	+,-	C3orf19,GRIP2	3389,-104861
chrX:47244374-47245057	chrX	+	47244403	47244854	True	NR_003710,NM_007130	chrX,chrX	+,-	SNORA11C,ZNF41	3194,97542
chr1:79465113-79466963	chr1	+	79465326	79467004	True	NM_022159,NM_006417	chr1,chr1	-,+	ELTD1,IFI44	5550,-349907
chr7:128164772-128165044	chr7	+	128164789	128164917	True	NM_183243,NM_018396	chr7,chr7	-,+	IMPDH1,METTL2B	-114753,-48060
chr17:61916158-61916728	chr17	+	61916234	61916766	True	NM_001199163,NM_001098426	chr17,chr17	+,-	PSMC5,SMARCD2	-11241,3635
chrX:102942884-102944759	chrX	+	102942887	102944408	True	NM_001142419,NM_001142418,NM_012286,NM_001142432,NM_001142430,NM_001142431,NM_001142420,NM_001142421,NM_001142422,NM_001142423,NM_001142424,NM_001142425,NM_001142426,NM_001142427,NM_001142428,NM_001142429,NM_182541	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,+	MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,MORF4L2,TMEM31	-17,-1141,-1141,-17,-1141,-17,-17,-17,-17,-1141,-1141,-1141,-1141,-17,-17,-1141,21428
chr4:42006963-42007662	chr4	+	42007290	42007630	True	NM_006345,NM_001159547	chr4,chr4	+,-	SLC30A9,BEND4	-14825,147315
chr20:54935117-54935347	chr20	+	54935117	54935395	True	NM_003600,NM_080821	chr20,chr20	-,+	AURKA,C20orf108	32006,-1185
chrX:46405150-46405425	chrX	+	46405153	46405467	True	NM_001039891,NR_015378,NM_001190417,NM_001146291	chrX,chrX,chrX,chrX	-,+,-,-	ZNF674,LOC401588,ZNF674,ZNF674	-261,-276,-261,-261
chr17:72888513-72888770	chr17	+	72888548	72888808	True	NM_178128,NM_178160	chr17,chr17	-,+	FADS6,OTOP2	947,31561
chr14:65883797-65885666	chr14	+	65884200	65885496	True	NM_178155,NM_178154,NR_024334,NM_004480,NM_178156	chr14,chr14,chr14,chr14,chr14	+,+,-,+,+	FUT8,FUT8,LOC645431,FUT8,FUT8	-6417,-4722,-4865,-4722,-6417
chr5:157288655-157288920	chr5	+	157288655	157288905	True	NM_014666,NM_173491,NM_001195555,NM_001195556	chr5,chr5,chr5,chr5	-,+,-,-	CLINT1,LSM11,CLINT1,CLINT1	-2472,-117957,-2472,-2472
chr1:25572536-25573009	chr1	+	25572535	25573050	True	NM_001127691,NM_020317	chr1,chr1	+,-	RHD,C1orf63	25930,985
chr3:197025492-197025861	chr3	+	197025601	197025910	True	NM_001204386,NM_004087,NR_024388,NM_001098424	chr3,chr3,chr3,chr3	-,-,+,-	DLG1,DLG1,LOC152217,DLG1	-154,-154,-356161,-154
chr11:118782722-118783324	chr11	+	118782755	118783359	True	NM_032966,NM_182557	chr11,chr11	+,-	CXCR5,BCL9L	-18705,-1142
chr19:39138678-39139663	chr19	+	39138683	39139582	True	NM_004924,NM_007181	chr19,chr19	+,-	ACTN4,MAP4K1	-467,-30040
chr19:16741098-16742051	chr19	+	16741285	16741845	True	NM_004831,NM_024074	chr19,chr19	-,+	MED26,TMEM38A	-2270,30092
chr18:24768775-24770527	chr18	+	24768935	24770552	True	NR_026908,NM_031422	chr18,chr18	+,-	C18orf16,CHST9	-323715,-3646
chr5:176810422-176810802	chr5	+	176810446	176810634	True	NM_001029886,NM_001167579,NM_003052	chr5,chr5,chr5	-,+,+	PFN3,SLC34A1,SLC34A1	17053,797,797
chr12:50614136-50615409	chr12	+	50614180	50615432	True	NM_032901,NM_001113547	chr12,chr12	+,-	C12orf62,LIMA1	-108333,1106
chr10:71332972-71333218	chr10	+	71333014	71333246	True	NM_145306,NM_020999	chr10,chr10	+,-	C10orf35,NEUROG3	56756,14
chrX:77165330-77165999	chrX	+	77165385	77165995	True	NM_000052,NM_032121	chrX,chrX	+,-	ATP7A,MAGT1	198,-14320
chr19:49457185-49457505	chr19	+	49457212	49457322	True	NM_004324,NM_138764,NM_001161587,NM_138763,NM_138761,NR_027882	chr19,chr19,chr19,chr19,chr19,chr19	+,+,-,+,+,+	BAX,BAX,GYS1,BAX,BAX,BAX	794,794,39344,794,794,794
chr15:23137623-23138556	chr15	+	23137694	23138557	True	NM_001142275,NR_024074	chr15,chr15	-,+	NIPA1,GOLGA8IP	-50851,116684
chr15:23137623-23138556	chr15	-	29053974	29054025	False	NR_033351,NR_037599	chr15,chr15	-,+	GOLGA8F,LOC646278	-275831,-19046
chrX:67992400-67992927	chrX	+	67992452	67992954	True	NM_002547,NM_004429	chrX,chrX	-,+	OPHN1,EFNB1	-339153,55885
chr15:62359380-62359878	chr15	+	62359397	62359771	True	NM_017684,NM_001018088,NM_018080,NM_020821,NM_207322	chr15,chr15,chr15,chr15,chr15	-,-,-,-,+	VPS13C,VPS13C,VPS13C,VPS13C,C2CD4A	-6733,-6733,-6733,-6733,-279
chr5:131893385-131894324	chr5	+	131893423	131894069	True	NM_005732,NM_000879	chr5,chr5	+,-	RAD50,IL5	-859,-14209
chr12:118404230-118405077	chr12	+	118404277	118405114	True	NM_173598,NM_001130112	chr12,chr12	-,+	KSR2,RFC5	964,49393
chr5:131593585-131593797	chr5	+	131593696	131593764	True	NM_001131027,NM_001142599,NM_003687	chr5,chr5,chr5	+,-,+	PDLIM4,P4HA2,PDLIM4	-396,-30140,-396
chr1:165800058-165801212	chr1	+	165800122	165800896	True	NM_019026,NM_012474	chr1,chr1	-,+	TMCO1,UCK2	-61987,-3447
chr3:58292760-58293170	chr3	+	58292962	58293147	True	NM_007042,NM_004944,NM_001098783	chr3,chr3,chr3	+,-,+	RPP14,DNASE1L3,RPP14	-1039,-92564,-1041
chr6:107434838-107435224	chr6	+	107434891	107435268	True	NM_001080450,NM_016487	chr6,chr6	-,+	BEND3,C6orf203	418,-85535
chr16:70150919-70151137	chr16	+	70150919	70151046	True	NM_017990,NR_003610	chr16,chr16	+,-	PDPR,PDXDC2P	-3441,-51068
chr16:70150919-70151137	chr16	-	74399253	74399380	False	NR_026950,NM_002811	chr16,chr16	-,+	LOC283922,PSMD7	2823,-68642
chr11:1715290-1715495	chr11	+	1715394	1715500	True	NR_026642,NM_001012416	chr11,chr11	-,+	FAM99B,KRTAP5-6	-8535,2924
chr2:172016995-172017238	chr2	+	172017155	172017229	True	NM_012290,NM_015530	chr2,chr2	-,+	TLK1,GORASP2	231,-232170
chr17:58754849-58755129	chr17	+	58754858	58755108	True	NM_017679,NM_001099432,NM_006380	chr17,chr17,chr17	+,+,-	BCAS3,BCAS3,APPBP2	63,63,-151278
chr1:1240456-1240832	chr1	+	1240576	1240878	True	NM_030649,NM_153339	chr1,chr1	-,+	ACAP3,PUSL1	2441,3115
chr11:82868522-82870516	chr11	+	82868571	82870553	True	NM_015885,NM_014488	chr11,chr11	+,-	PCF11,RAB30	-485,-85687
chr11:134122761-134123411	chr11	+	134122790	134123209	True	NM_001037304,NM_001037305,NM_199297,NM_014384,NM_014174,NM_199298	chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,+,-,-	THYN1,THYN1,THYN1,ACAD8,THYN1,THYN1	102,102,102,224,102,102
chr17:46624059-46625784	chr17	+	46624064	46625823	True	NM_002145,NR_033201	chr17,chr17	-,+	HOXB2,LOC404266	-1671,41999
chrX:155224390-155225934	chrY	+	59327920	59328679	False	NR_002179,NM_002186	chrY,chrY	-,+	TTTY17C,IL9R	-31997000,1572
chrX:155224390-155225934	chrX	+	155224914	155225673	True	NM_002186,NM_018196	chrX,chrX	+,-	IL9R,TMLHE	1572,-382292
chr2:187467400-187468749	chr2	+	187467619	187468588	True	NM_182521,NM_001144999	chr2,chr2	-,+	ZSWIM2,ITGAV	245372,-2746
chr17:4689560-4689763	chr17	+	4689642	4689780	True	NM_002798,NM_001014985,NM_001144939,NM_001144941,NM_001144940,NM_182566	chr17,chr17,chr17,chr17,chr17,chr17	+,+,-,-,-,-	PSMB6,GLTPD2,VMO1,VMO1,VMO1,VMO1	9676,2473,-1,-1,-1,-1
chr3:194991254-194991498	chr3	+	194991331	194991493	True	NR_003265,NM_152531	chr3,chr3	+,-	SDHAP2,C3orf21	393416,452
chr5:38843397-38845026	chr5	+	38843589	38844885	True	NM_003999,NM_001168355,NM_152756	chr5,chr5,chr5	+,+,-	OSMR,OSMR,RICTOR	1215,1074,229673
chr15:40855453-40856110	chr15	+	40855582	40855998	True	NM_052849,NM_001080792,NM_001080791,NM_152260	chr15,chr15,chr15,chr15	-,-,-,+	C15orf57,C15orf57,C15orf57,RPUSD2	1314,1314,1314,5538
chr17:2318199-2318633	chr17	+	2318207	2318668	True	NM_001098509,NR_028335	chr17,chr17	+,-	SGSM2,LOC284009	-77450,112
chr4:88584184-88584393	chr4	+	88584248	88584436	True	NM_004407,NM_004684	chr4,chr4	+,-	DMP1,SPARCL1	-12845,-133593
chr6:138893710-138894101	chr6	+	138893738	138894130	True	NM_020464,NR_033896	chr6,chr6	-,+	NHSL1,FLJ46906	-70,118674
chr1:53092614-53094174	chr1	+	53093116	53093548	True	NM_023077,NM_001042693	chr1,chr1	-,+	SELRC1,FAM159A	70540,5517
chr10:61669422-61670210	chr10	+	61669504	61669894	True	NM_005436,NM_001143774	chr10,chr10	-,+	CCDC6,PHYHIPL	-3090,-732336
chr3:50384795-50385235	chr3	+	50384801	50385237	True	NM_015896,NM_007022,NM_006545,NM_170712,NM_170713,NM_007182,NM_170714	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-,-	ZMYND10,CYB561D2,NPRL2,RASSF1,RASSF1,RASSF1,RASSF1	-1645,3059,3299,-9137,-9906,-6434,-6434
chr22:44288047-44288611	chr22	+	44288092	44288660	True	NM_001177675,NM_025225,NM_138814	chr22,chr22,chr22	-,+,-	PNPLA5,PNPLA3,PNPLA5	-199,30958,-199
chr9:72435203-72435574	chr9	+	72435429	72435607	True	NM_001099666,NM_001010940	chr9,chr9	-,+	PTAR1,C9orf135	-60553,123
chr6:119250944-119251434	chr6	+	119250996	119251186	True	NM_017696,NM_153255,NM_014034	chr6,chr6,chr6	-,-,+	MCM9,MCM9,ASF1A	1771,5195,-35816
chr1:95003841-95005666	chr1	+	95003847	95005689	True	NM_001178096,NM_001993,NM_002858	chr1,chr1,chr1	-,-,+	F3,F3,ABCD3	1774,1774,-119967
chr22:51067929-51068292	chr22	+	51068153	51068339	True	NM_000487,NM_016431,NM_001085428,NM_001085426,NM_001085427,NM_001085425	chr22,chr22,chr22,chr22,chr22,chr22	-,+,-,-,-,-	ARSA,MAPK8IP2,ARSA,ARSA,ARSA,ARSA	-1552,-26645,-1552,-1552,-1552,-1552
chr8:74905389-74906551	chr8	+	74905388	74906587	True	NM_005648,NM_015364,NM_001195797	chr8,chr8,chr8	-,+,+	TCEB1,LY96,LY96	-20866,-1879,-1879
chr17:36105484-36105728	chr17	+	36105574	36105774	True	NM_001165923,NM_032258,NM_000458	chr17,chr17,chr17	-,+,-	HNF1B,TBC1D3F,HNF1B	-478,178185,-478
chr6:107810377-107810659	chr6	+	107810482	107810641	True	NM_018013,NM_020381	chr6,chr6	+,-	SOBP,PDSS2	675,-29703
chr19:15938469-15938817	chr19	+	15938641	15938719	True	NM_013940,NR_015379	chr19,chr19	-,+	OR10H1,UCA1	-19705,1037
chr2:220252986-220253227	chr2	+	220253103	220253249	True	NM_012100,NM_001927	chr2,chr2	-,+	DNPEP,DES	-441,29849
chr16:29673463-29673808	chr16	+	29673501	29673679	True	NR_002593,NM_001030288,NM_003123	chr16,chr16,chr16	-,+,+	SLC7A5P1,SPN,SPN	-48463,620,900
chr7:5863055-5864409	chr7	+	5863656	5864312	True	NM_207116,NR_023382	chr7,chr7	-,+	RNF216,ZNF815	-42295,-923
chr15:93198746-93198967	chr15	+	93198762	93198938	True	NR_033769,NM_207446	chr15,chr15	+,-	ASB9P1,FAM174B	139775,143
chr5:34180171-34181174	chr5	+	34180435	34180499	True	NM_016568,NR_037951	chr5,chr5	+,-	RXFP3,C1QTNF3-AMACR	-243998,-55802
chr4:26320899-26321126	chr4	+	26320955	26321173	True	NM_203284,NM_015874,NM_203283,NM_005349,NM_000730	chr4,chr4,chr4,chr4,chr4	+,+,+,+,-	RBPJ,RBPJ,RBPJ,RBPJ,CCKAR	1274,1274,158,158,170919
chr5:172070254-172070919	chr5	+	172070283	172070911	True	NM_001142651,NM_004417	chr5,chr5	+,-	NEURL1B,DUSP1	-2059,127342
chr16:1399888-1400127	chr16	+	1399915	1400175	True	NM_032520,NM_001001410	chr16,chr16	+,-	GNPTG,C16orf42	1724,1748
chr3:42304068-42304912	chr3	+	42304141	42304806	True	NM_014965,NM_000729,NM_001174138	chr3,chr3,chr3	+,-,-	TRAK1,CCK,CCK	-102531,2906,683
chr19:44646022-44646265	chr19	+	44646141	44646259	True	NM_001144824,NM_006630,NR_033341	chr19,chr19,chr19	+,+,-	ZNF234,ZNF234,LOC100379224	-486,-486,-28805
chr2:85362070-85362292	chr2	+	85362079	85362273	True	NM_006464,NM_031283	chr2,chr2	-,+	TGOLN2,TCF7L1	193151,-1547
chr19:55477206-55477631	chr19	+	55477312	55477617	True	NM_001174083,NM_001174082,NM_017852,NM_001174081,NM_206828	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	NLRP2,NLRP2,NLRP2,NLRP2,NLRP7	93,93,93,-724,-18439
chr19:55477206-55477631	chr19	+	55476222	55476527	False	NM_001174083,NM_001174082,NM_001174081,NM_017852,NM_206828	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	NLRP2,NLRP2,NLRP2,NLRP2,NLRP7	1183,1183,124,1183,-17349
chr2:74712443-74712688	chr2	+	74712490	74712582	True	NM_032779,NR_027749,NM_022492	chr2,chr2,chr2	-,+,+	CCDC142,TTC31,TTC31	-2133,-2342,-2342
chr6:34725442-34726183	chr6	+	34725523	34725930	True	NM_024294,NR_029472,NM_003093	chr6,chr6,chr6	-,+,+	C6orf106,SNRPC,SNRPC	-60898,-703,-703
chr5:176900947-176901451	chr5	+	176900961	176901469	True	NM_001174102,NM_080881,NM_004395	chr5,chr5,chr5	+,-,-	PRR7,DBN1,DBN1	-25686,-1090,-267
chr3:160165969-160167630	chr3	+	160166037	160167503	True	NR_029525,NM_173084	chr3,chr3	+,-	MIR16-2,TRIM59	-43562,173
chr7:128581347-128581586	chr7	+	128581411	128581603	True	NM_199349,NM_001098629,NM_032643,NM_001098627,NM_001098630	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	KCP,IRF5,IRF5,IRF5,IRF5	-30638,-3468,-3191,-690,-3468
chr19:49015342-49015580	chr19	+	49015355	49015613	True	NM_177973,NM_001080434	chr19,chr19	+,-	SULT2B1,LMTK3	39815,883
chr12:113435978-113436966	chr12	+	113436052	113436796	True	NM_016817,NM_001193521	chr12,chr12	+,-	OAS2,RASAL1	-19836,136813
chr9:100294398-100295308	chr9	+	100294397	100295350	True	NM_139246,NM_003275	chr9,chr9	-,+	TSTD2,TMOD1	100662,-30527
chr10:88430497-88430733	chr10	+	88430546	88430668	True	NM_001080115,NM_001080114,NM_001080116,NM_001171611,NM_001171610,NM_007078,NM_015045	chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,+,-	LDB3,LDB3,LDB3,LDB3,LDB3,LDB3,WAPAL	-2171,-2171,-2276,-2171,-2391,-2171,-149005
chr3:11035583-11036255	chr3	+	11035749	11036186	True	NM_003042,NR_027102	chr3,chr3	+,-	SLC6A1,LOC285370	-1380,-229872
chr1:211614765-211615230	chr1	+	211614867	211615032	True	NM_001164688,NR_026761	chr1,chr1	-,+	RD3,C1orf97	51284,-58837
chr4:151003804-151005196	chr4	+	151003931	151005067	True	NM_001040261,NM_001040260,NM_001199282,NR_036614	chr4,chr4,chr4,chr4	+,+,-,+	DCLK2,DCLK2,LRBA,DCLK2	-4563,-4563,931420,-4563
chr2:42588094-42588313	chr2	+	42588191	42588343	True	NM_019063,NM_004718	chr2,chr2	+,-	EML4,COX7A2L	-191752,63
chr9:79071744-79072255	chr9	+	79071877	79071997	True	NM_018339,NM_001490,NM_001097633	chr9,chr9,chr9	-,+,+	RFK,GCNT1,GCNT1	-62433,2070,2070
chr7:65114748-65115287	chr7	+	65115239	65115313	True	NM_000181,NR_027392	chr7,chr7	-,+	GUSB,INTS4L2	332038,-2513
chr20:39861978-39862351	chr20	+	39861980	39862391	True	NM_015035,NM_182811	chr20,chr20	-,+	ZHX3,PLCG1	66399,-95875
chr3:170588300-170588543	chr3	+	170588312	170588456	True	NM_001099645,NM_001185056	chr3,chr3	-,+	RPL22L1,CLDN11	-267,-449335
chr5:175793164-175793406	chr5	+	175793184	175793368	True	NM_173664,NM_001079685,NM_001079684,NM_020444	chr5,chr5,chr5,chr5	+,-,-,-	ARL10,KIAA1191,KIAA1191,KIAA1191	-733,-4375,-4375,-4375
chr17:79876444-79877230	chr12	+	45228689	45228739	True	NM_001145109,NM_001025356	chr12,chr12	-,+	NELL2,ANO6	40755,381030
chr3:150421863-150423028	chr3	+	150421919	150422404	True	NM_016275,NM_152394	chr3,chr3	+,-	SELT,FAM194A	-100904,-177
chr7:121755176-121756715	chr7	+	121755206	121756739	True	NM_005763,NR_036484	chr7,chr7	-,+	AASS,LOC154860	27657,186972
chr19:48821820-48822224	chr19	+	48821961	48822269	True	NM_144577,NM_001425	chr19,chr19	-,+	CCDC114,EMP3	1113,6359
chr11:47588880-47589630	chr11	+	47588997	47589462	True	NM_001143984,NM_175732,NM_016506	chr11,chr11,chr11	+,+,-	PTPMT1,PTPMT1,KBTBD4	-2078,-2078,11119
chr10:99187474-99188422	chr10	+	99187547	99188361	True	NM_002629,NM_016046	chr10,chr10	+,-	PGAM1,EXOSC1	-1571,17457
chr1:101702776-101703975	chr1	+	101702787	101703829	True	NM_001400,NM_015958	chr1,chr1	+,-	S1PR1,DPH5	-534,-211425
chr4:184421714-184422190	chr4	+	184421841	184422104	True	NR_033995,NM_001564	chr4,chr4	-,+	LOC389247,ING2	3619,4115
chr17:74868559-74868860	chr17	+	74868677	74868897	True	NM_144677,NM_198955,NM_001199172,NR_036608	chr17,chr17,chr17,chr17	+,+,+,-	MGAT5B,MGAT5B,MGAT5B,SRSF2	-3930,1,-3930,-135184
chr18:18684412-18686406	chr18	+	18684570	18686189	True	NM_005406,NM_001142966	chr18,chr18	-,+	ROCK1,GREB1L	5680,136013
chr17:26925876-26926099	chr17	+	26925947	26926041	True	NM_003170,NM_006461	chr17,chr17	+,-	SUPT6H,SPAG5	63260,65
chr14:95559909-95560400	chr14	+	95559940	95560368	True	NR_015415,NM_001195573	chr14,chr14	+,-	FLJ45244,DICER1	63656,39522
chr8:28748498-28748732	chr8	+	28748502	28748780	True	NM_001172562,NM_024567,NR_026826,NM_001135726,NM_018250,NM_001145159	chr8,chr8,chr8,chr8,chr8,chr8	-,+,-,+,-,-	INTS9,HMBOX1,INTS9,HMBOX1,INTS9,INTS9	-1070,-328,-804,-642,-804,-804
chr2:87303947-87304172	chr2	+	87303988	87304188	True	NR_026846,NM_001024457	chr2,chr2	-,+	LOC285074,RGPD1	-452,-159301
chr2:87303947-87304172	chr2	-	86946784	86946985	False	NM_022780,NM_001198954	chr2,chr2	+,-	RMND5A,RNF103-VPS24	428,1310
chr20:18489658-18491128	chr20	+	18489721	18491057	True	NM_006606,NM_006363,NM_032986,NM_032985,NM_001172746,NM_001172745	chr20,chr20,chr20,chr20,chr20,chr20	-,+,+,+,+,+	RBBP9,SEC23B,SEC23B,SEC23B,SEC23B,SEC23B	-11834,-1592,-1592,-1592,-1570,-1173
chrX:107684698-107686686	chrX	+	107684870	107686698	True	NM_033641,NM_033380,NM_000495,NM_001847	chrX,chrX,chrX,chrX	-,+,+,-	COL4A6,COL4A5,COL4A5,COL4A6	-3212,-1769,-1769,-2166
chr3:33155861-33156068	chr3	+	33155968	33156054	True	NM_001135602,NM_006371	chr3,chr3	-,+	GLB1,CRTAP	-17274,-569
chr1:149812897-149813423	chr1	+	149812938	149813454	True	NM_001040874,NM_001005464,NM_003548,NR_036461,NM_001034077,NM_003516,NM_021059	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,+,-,+,-,-	HIST2H2AA4,HIST2H3A,HIST2H4A,HIST2H2BC,HIST2H4B,HIST2H2AA3,HIST2H3C	914,-173,-8768,8936,-8768,914,-173
chr1:149812897-149813423	chr1	-	149823491	149824007	False	NM_001040874,NM_001005464,NM_003548,NR_036461,NM_001034077,NM_003516,NM_021059	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,-,-,+,+	HIST2H2AA4,HIST2H3A,HIST2H4A,HIST2H2BC,HIST2H4B,HIST2H2AA3,HIST2H3C	-914,173,8768,-1151,8768,-914,173
chr9:116101611-116102111	chr9	+	116101616	116102015	True	NM_001012361,NM_145241,NM_017688	chr9,chr9,chr9	-,-,+	WDR31,WDR31,BSPRY	664,664,9796
chr16:3454577-3455726	chr16	+	3454665	3455261	True	NM_017810,NM_001032292,NM_003450	chr16,chr16,chr16	-,+,+	ZNF434,ZNF174,ZNF174	-3640,-3526,-3526
chr19:18139344-18139837	chr19	+	18139347	18139478	True	NM_015683,NM_005535	chr19,chr19	+,-	ARRDC2,IL12RB1	-20421,58280
chr15:44964151-44964535	chr15	+	44964266	44964524	True	NM_025137,NM_004048,NM_001160227,NM_001145112	chr15,chr15,chr15,chr15	-,+,-,-	SPG11,B2M,SPG11,PATL2	-8390,39160,-8390,4612
chr6:43276476-43277483	chr6	+	43276701	43277283	True	NM_153320,NM_206922	chr6,chr6	+,-	SLC22A7,CRIP3	-10754,-171
chr10:126715545-126715768	chr10	+	126715661	126715789	True	NM_022802,NM_017580,NR_036178	chr10,chr10,chr10	-,+,-	CTBP2,ZRANB1,MIR4296	714,-85020,5700
chr5:109023955-109024967	chr5	+	109024053	109024831	True	NM_014819,NM_002372	chr5,chr5	-,+	PJA2,MAN2A1	-278378,324
chr3:121303894-121304882	chr3	+	121304187	121304793	True	NM_199420,NM_016298	chr3,chr3	-,+	POLQ,FBXO40	-39334,7376
chr19:49056268-49056723	chr19	+	49056272	49056564	True	NM_177973,NM_001080434	chr19,chr19	+,-	SULT2B1,LMTK3	-894,-39826
chr14:21854920-21855499	chr14	+	21855007	21855363	True	NM_014828,NR_003029,NM_007192	chr14,chr14,chr14	+,-,-	TOX4,SNORD9,SUPT16H	89971,5109,-2582
chr7:148395338-148395574	chr7	+	148395493	148395557	True	NM_003592,NM_001203249	chr7,chr7	+,-	CUL1,EZH2	375,185094
chr17:20631316-20633061	chr17	+	20631750	20632806	True	NM_001190790,NM_001004306	chr17,chr17	+,-	CDRT15L2,CCDC144NL	-148775,166705
chr17:36350316-36351066	chr17	+	36350739	36350808	True	NM_032258,NM_001123391	chr17,chr17	-,-	TBC1D3F,TBC1D3	-2073,-2073
chr16:81112733-81113193	chr16	+	81112860	81112963	True	NM_152337,NM_015251,NM_001100873	chr16,chr16,chr16	-,+,-	C16orf46,ATMIN,C16orf46	-1988,-43456,-1988
chr5:74818301-74819877	chr5	+	74818548	74819665	True	NM_016218,NM_001130105	chr5,chr5	+,-	POLK,COL4A3BP	-10951,-10742
chr1:52454854-52455081	chr1	+	52455004	52455082	True	NM_002867,NM_001136497	chr1,chr1	-,+	RAB3B,BTF3L4	1408,66774
chr9:136602782-136603464	chr9	+	136602800	136603452	True	NM_007101,NM_000787,NM_001134707	chr9,chr9,chr9	-,+,-	SARDH,DBH,SARDH	1675,-101366,77
chr1:181451678-181451941	chr1	+	181451730	181451902	True	NM_005819,NM_000721	chr1,chr1	-,+	STX6,CACNA1E	-459684,813
chr1:113212669-113212869	chr1	+	113212689	113212923	True	NM_001130079,NM_020963,NM_001042679	chr1,chr1,chr1	+,+,-	MOV10,MOV10,RHOC	4124,4124,36811
chr1:21978905-21979286	chr1	+	21979093	21979223	True	NM_001177520,NM_001145658	chr1,chr1	+,-	ALPL,RAP1GAP	-143286,-745
chr9:139703202-139703817	chr9	+	139703299	139703765	True	NM_024718,NM_001173989,NM_001173988,NR_024580	chr9,chr9,chr9,chr9	+,+,+,-	C9orf86,C9orf86,C9orf86,LOC100131193	-977,-977,-977,1
chr19:8373192-8373824	chr19	+	8373269	8373722	True	NM_001031,NM_016579,NM_001165895	chr19,chr19,chr19	+,-,-	RPS28,CD320,CD320	12661,-29,-29
chr1:153701091-153701323	chr1	+	153701212	153701336	True	NM_023015,NM_004515	chr1,chr1	+,-	INTS3,ILF2	-696,-57733
chr18:14543722-14544203	chr18	+	14543758	14544102	True	NM_001137671,NM_001145029	chr18,chr18	-,+	POTEC,ANKRD30B	-159,204136
chr12:14822036-14822656	chr12	+	14822447	14822706	True	NM_177925,NM_004963	chr12,chr12	+,-	H2AFJ,GUCY2C	104563,26864
chr3:9746516-9746729	chr3	+	9746567	9746651	True	NM_003656,NM_153635	chr3,chr3	-,+	CAMK1,CPNE9	65067,-1108
chr12:114845010-114845924	chr12	+	114845149	114845913	True	NM_181486,NM_080718,NM_000192,NM_080717,NM_138432	chr12,chr12,chr12,chr12,chr12	-,-,-,-,+	TBX5,TBX5,TBX5,TBX5,SDSL	-1260,-3446,384,384,-984984
chr11:73476993-73478430	chr11	+	73477027	73478241	True	NM_198896,NM_016055,NM_002869	chr11,chr11,chr11	-,+,-	RAB6A,MRPL48,RAB6A	-4826,20675,-4826
chr21:34960106-34960452	chr21	+	34960105	34960349	True	NM_138927,NM_017613	chr21,chr21	+,-	SON,DONSON	-44806,715
chr1:45308362-45308669	chr1	+	45308410	45308684	True	NM_003738,NM_001166292,NM_001136537	chr1,chr1,chr1	-,-,+	PTCH2,PTCH2,BTBD19	-18,-18,-34307
chr15:25472073-25472504	chr15	+	25472084	25472404	True	NR_003358,NR_003496,NR_003497,NR_003351,NR_003344,NR_003345,NR_003346,NR_003347,NM_130838,NR_003343,NR_003303,NR_003348,NR_003349,NR_003350	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,-,+,+,+,+,+	SNORD115-43,HBII-52-27,HBII-52-28,SNORD115-36,SNORD115-29,SNORD115-30,SNORD115-31,SNORD115-32,UBE3A,SNORD115-26,SNORD115-11,SNORD115-33,SNORD115-34,SNORD115-35	-3742,-6485,-4634,-3742,-3742,-1785,23,1709,178299,-8371,-3742,3580,5129,6989
chr13:77568132-77568417	chr13	+	77568142	77568456	True	NM_006493,NM_012158	chr13,chr13	+,-	CLN5,FBXL3	-2141,32925
chr19:13875914-13876464	chr19	+	13875934	13876463	True	NR_036515,NM_014047,NM_001031727,NM_032285	chr19,chr19,chr19,chr19	-,+,+,+	LOC284454,C19orf53,MRI1,MRI1	70690,8793,-648,-648
chr20:2276113-2276796	chr20	+	2276186	2276650	True	NR_003684,NM_003245	chr20,chr20	-,+	SNORD119,TGM3	167093,-38
chr1:46206209-46207346	chr1	+	46206243	46206988	True	NM_005897,NM_001145349,NM_016486	chr1,chr1,chr1	-,-,+	IPP,IPP,TMEM69	9554,9554,-52456
chr1:216565724-216567411	chr1	+	216565869	216567288	True	NM_206933,NM_016121	chr1,chr1	-,+	USH2A,KCTD3	29514,-825185
chr12:107379785-107380261	chr12	+	107379790	107380122	True	NM_025198,NM_001033050,NM_152261	chr12,chr12,chr12	-,-,+	MTERFD3,MTERFD3,C12orf23	867,867,-30297
chr3:128902202-128902450	chr3	+	128902223	128902461	True	NM_001127195,NM_001127194,NM_001127196,NM_001127193,NM_001127192,NM_016128,NM_003418	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,-,+,-	CNBP,CNBP,CNBP,CNBP,CNBP,COPG,CNBP	399,399,399,399,399,65991,399
chr7:154787414-154788354	chr7	+	154787762	154788379	True	NR_028090,NM_007349	chr7,chr7	+,-	LOC202781,PAXIP1	6763,6354
chr9:140338069-140338474	chr9	+	140338115	140338276	True	NM_001033113,NM_006647,NM_198585	chr9,chr9,chr9	-,+,-	ENTPD8,NOXA1,ENTPD8	-2214,-20328,-2214
chr11:111250825-111251210	chr11	+	111250828	111251222	True	NM_001136105,NM_006235	chr11,chr11	+,-	C11orf93,POU2AF1	-80903,-671
chr6:33546888-33547211	chr6	+	33547160	33547220	True	NR_028361,NM_001188	chr6,chr6	+,-	GGNBP1,BAK1	4255,900
chr6:32733945-32734438	chr6	+	32734276	32734348	True	NM_020056,NM_001198858	chr6,chr6	+,-	HLA-DQA2,HLA-DQB2	-25166,-2946
chr6:32733945-32734438	chr6_ssto_hap7	+	4165942	4166014	False	NM_020056,NM_001198858	chr6_ssto_hap7,chr6_ssto_hap7	+,-	HLA-DQA2,HLA-DQB2	-25164,-2946
chr5:87968842-87970224	chr5	+	87968960	87969896	True	NR_024383,NR_030741,NM_022650,NR_024384	chr5,chr5,chr5,chr5	-,-,+,-	LOC645323,MIR9-2,RASA1,LOC645323	4417,-6203,-1404254,-116
chr11:82905716-82907046	chr11	+	82905768	82906750	True	NM_182603,NM_021825	chr11,chr11	+,-	ANKRD42,CCDC90B	-528,90681
chr14:74555767-74556946	chr14	+	74555796	74556610	True	NM_005589,NM_001024674	chr14,chr14	-,+	ALDH6A1,LIN52	-4600,-4191
chr12:21926522-21926888	chr12	+	21926528	21926929	True	NM_030572,NM_004982	chr12,chr12	+,-	C12orf39,KCNJ8	-247323,868
chrY:9642553-9644037	chrY	+	9642768	9644016	True	NR_001539,NR_003589	chrY,chrY	+,-	TTTY22,TTTY1B	-4057,-30840
chr3:138157239-138158063	chr3	+	138157524	138157996	True	NM_031913,NM_178130	chr3,chr3	+,-	ESYT3,TXNDC6	-4167,-108796
chr13:21141517-21142246	chr13	+	21141579	21142065	True	NM_175605,NM_006531,NM_015974	chr13,chr13,chr13	+,+,-	IFT88,IFT88,CRYL1	-422,-422,-41567
chr5:43514694-43515290	chr5	+	43514735	43515213	True	NM_198566,NM_012343	chr5,chr5	-,+	C5orf34,NNT	110,87577
chr4:49517030-49518345	chr4	+	49517423	49518119	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-529209,-608608
chr12:102007932-102008302	chr12	+	102007982	102008272	True	NM_206821,NM_001177948	chr12,chr12	+,-	MYBPC1,SYCP3	-19293,125042
chr9:33476422-33476766	chr9	+	33476551	33476795	True	NM_022917,NR_003573,NM_139235	chr9,chr9,chr9	-,+,-	NOL6,ANXA2P2,NOL6	-2610,147427,-2610
chr18:32641441-32642164	chr18	+	32641524	32642018	True	NM_001112734,NR_026570	chr18,chr18	-,+	ZSCAN30,MAPRE2	228228,-20251
chr9:107510997-107511244	chr9	+	107511040	107511250	True	NM_015469,NM_001001956	chr9,chr9	+,-	NIPSNAP3A,OR13C9	-1122,-130555
chr15:22833931-22835110	chr15	+	22834033	22834827	True	NR_027407,NM_001102610,NM_052903	chr15,chr15,chr15	-,+,+	GOLGA8DP,TUBGCP5,TUBGCP5	-118305,-690,-690
chr22:19268533-19269150	chr22	+	19269059	19269179	True	NM_001835,NM_003776,NM_053006	chr22,chr22,chr22	-,+,+	CLTCL1,MRPL40,TSSK2	10110,150856,-150789
chr12:27084924-27086512	chr12	+	27085345	27086539	True	NM_001171887,NM_001171888,NM_015633,NM_018164	chr12,chr12,chr12,chr12	+,+,+,-	FGFR1OP2,FGFR1OP2,FGFR1OP2,C12orf11	4765,4765,4765,4765
chr11:117798777-117799704	chr11	+	117798792	117799702	True	NM_001558,NM_001077263	chr11,chr11	+,-	IL10RA,TMPRSS13	57403,463
chr9:134586130-134587183	chr9	+	134586308	134587201	True	NM_007171,NM_198679	chr9,chr9	+,-	POMT1,RAPGEF1	-208077,-1079
chr7:149323836-149325060	chr7	+	149323975	149325012	True	NM_032534,NR_027788,NR_027789	chr7,chr7,chr7	+,-,-	KRBA1,ZNF767,ZNF767	87135,-2094,-2094
chr22:31639205-31639506	chr22	+	31639204	31639554	True	NM_001031801,NM_001135911,NM_016733	chr22,chr22,chr22	+,-,+	LIMK2,PIK3IP1,LIMK2	4793,49016,4793
chr9:39288486-39288742	chr9	+	39288494	39288628	True	NM_033655,NM_001085452	chr9,chr9	-,+	CNTNAP3,FAM75A1	-194,67070
chr9:39288486-39288742	chr9	-	43684736	43684870	False	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	-54006,14
chr9:39288486-39288742	chr9	+	40633511	40633793	False	NM_001083124,NM_033160	chr9,chr9	+,-	FAM75A3,ZNF658	66497,158601
chr9:39288486-39288742	chr9	+	39817741	39817875	False	NR_003528,NM_001085452	chr9,chr9	-,+	LOC653501,FAM75A1	-353215,67099
chr16:57311901-57312174	chr16	+	57311901	57311976	True	NM_015993,NM_012106	chr16,chr16	-,+	PLLP,ARL2BP	6659,-32914
chr2:200325200-200325914	chr2	+	200325199	200325952	True	NM_001172509,NM_001172517,NR_026830	chr2,chr2,chr2	-,-,+	SATB2,SATB2,FLJ32063	-2380,3934,6868
chr10:124896945-124897151	chr10	+	124896947	124897123	True	NM_022466,NM_001105574	chr10,chr10	-,+	IKZF5,HMX3	-128636,-1431
chr6:7909640-7909965	chr6	+	7909644	7909922	True	NR_027712,NM_001145549,NM_030810	chr6,chr6,chr6	+,-,-	PIP5K1P1,TXNDC5,TXNDC5	76412,438,1175
chr17:74022589-74023152	chr17	+	74022866	74023066	True	NM_001258,NM_001988	chr17,chr17	+,-	CDK3,EVPL	-25930,491
chr12:56497883-56498108	chr12	+	56497888	56498126	True	NM_001130420,NM_006191	chr12,chr12	-,+	SMARCC2,PA2G4	85275,-6
chrX:153884163-153885223	chrX	+	153884168	153884568	True	NM_172377,NM_020994,NM_139250	chrX,chrX,chrX	-,-,+	CTAG2,CTAG2,CTAG1A	-2315,-2315,-70801
chr8:96036141-96037179	chr8	+	96036270	96036832	True	NR_037484,NM_152416	chr8,chr8	-,+	MIR3150B,C8orf38	48442,388
chr8:121450403-121452292	chr8	+	121450664	121452328	True	NM_022045,NM_014078	chr8,chr8	+,-	MTBP,MRPL13	5337,5376
chr8:11665468-11665854	chr8	+	11665569	11665761	True	NM_004462,NM_001908	chr8,chr8	+,-	FDFT1,CTSB	-5430,59935
chr7:128829433-128829671	chr7	+	128829470	128829670	True	NM_005631,NR_034053	chr7,chr7	+,-	SMO,TNPO3	-808,-134243
chr11:129937874-129939044	chr11	+	129938292	129939004	True	NR_024516,NR_024515,NM_001642,NM_001142278,NM_199437,NM_001142277,NM_001142276	chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,-,+,+	APLP2,APLP2,APLP2,APLP2,PRDM10,APLP2,APLP2	711,711,711,711,-65562,711,711
chr12:101879872-101880171	chr12	+	101879908	101880176	True	NM_152323,NM_001177	chr12,chr12	+,-	SPIC,ARL1	-8631,-78336
chr5:175395360-175395950	chr5	+	175395363	175395705	True	NM_032361,NM_001008220	chr5,chr5	-,+	THOC3,CPLX2	26,-96913
chr5:175395360-175395950	chr5	-	177302101	177302443	False	NR_003615,NM_173663	chr5,chr5	+,-	LOC728554,FAM153A	-26,-94596
chr6:14790556-14790915	chr6	+	14790557	14790940	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	455586,872406
chr4:37832150-37832738	chr4	+	37832150	37832523	True	NM_001085400,NM_018290	chr4,chr4	-,+	RELL1,PGM2	-144151,-3921
chr21:35739401-35740619	chr21	+	35739634	35740461	True	NM_001127670,NM_058182,NM_172201	chr21,chr21,chr21	-,+,+	KCNE1,FAM165B,KCNE2	87653,7287,-3362
chr19:41385969-41386393	chr19	+	41385999	41386425	True	NM_030589,NR_001278,NM_000764	chr19,chr19,chr19	-,+,-	CYP2A7,CYP2B7P1,CYP2A7	2282,43744,2282
chr22:17960303-17961008	chr22	+	17960482	17960875	True	NM_001039366,NM_031413	chr22,chr22	-,+	ATP6V1E1,CECR2	150764,-3917
chr8:74883123-74883636	chr8	+	74883297	74883369	True	NM_001204858,NM_001204859,NM_001204857,NM_017866,NM_005648,NR_033334,NM_001204863,NM_001204862,NM_001204861,NM_001204860,NM_001204864,NM_001040613	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,+,-,+,-,-,-,-,-,+	TCEB1,TCEB1,TCEB1,TMEM70,TCEB1,TMEM70,TCEB1,TCEB1,TCEB1,TCEB1,TCEB1,TMEM70	1203,1203,1203,5007,1203,5007,1203,824,824,1203,1203,5007
chr6:78476289-78477019	chr6	+	78476408	78476796	True	NM_000863,NM_001010844	chr6,chr6	-,+	HTR1B,IRAK1BP1	-303288,1100392
chr7:45961262-45961471	chr7	+	45961274	45961378	True	NM_000596,NM_000598,NM_001013398	chr7,chr7,chr7	+,-,-	IGFBP1,IGFBP3,IGFBP3	-33366,-403,-403
chr2:158125766-158126409	chr2	+	158125846	158126444	True	NM_014568,NM_020711	chr2,chr2	+,-	GALNT5,ERMN	-11557,56022
chr17:19090022-19091017	chr17	+	19090039	19091053	True	NM_006613,NM_001102664	chr17,chr17	-,+	GRAP,EPN2	-139703,49636
chr17:19090022-19091017	chr17	-	19093833	19094847	False	NM_006613,NM_001102664	chr17,chr17	-,+	GRAP,EPN2	-143497,45842
chr17:19090022-19091017	chr17	-	19016224	19017238	False	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	13543,-65888
chr17:19090022-19091017	chr17	+	18964231	18964949	False	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	65832,-13895
chr17:19090022-19091017	chr17	-	18967724	18968752	False	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	62029,-17388
chr7:100207666-100208119	chr7	+	100207667	100207870	True	NM_001040098,NM_001040097,NM_002593,NM_023948,NM_002319,NM_001040099	chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,-,+	MOSPD3,MOSPD3,PCOLCE,MOSPD3,LRCH4,MOSPD3	2182,1854,-7837,2243,-23891,2243
chr10:99338464-99339503	chr10	+	99338520	99338798	True	NM_178832,NM_020349,NM_001134670,NM_001129981,NM_138413	chr10,chr10,chr10,chr10,chr10	-,+,+,+,+	MORN4,ANKRD2,HOGA1,ANKRD2,HOGA1	54596,-6319,5303,-6319,5303
chr6:2970715-2971098	chr6	+	2970725	2971122	True	NR_026855,NM_001195291,NM_004568	chr6,chr6,chr6	+,-,-	DKFZP686I15217,SERPINB6,SERPINB6	17078,1327,1327
chr15:86221176-86222145	chr15	+	86221460	86222185	True	NR_031682,NM_144767	chr15,chr15	-,+	MIR1276,AKAP13	91674,-1252
chr7:152374516-152374742	chr7	+	152374712	152374791	True	NM_005431,NM_001040135	chr7,chr7	-,+	XRCC2,ACTR3B	-1462,82059
chr4:54929537-54930120	chr4	+	54929551	54930131	True	NM_133267,NM_012110	chr4,chr4	+,-	GSX2,CHIC2	36116,707
chr22:41137599-41138366	chr22	+	41138021	41138224	True	NM_006358,NM_005297	chr22,chr22	-,+	SLC25A17,MCHR1	77219,-62899
chr4:80776123-80776526	chr4	+	80776151	80776564	True	NR_026555,NM_058172	chr4,chr4	+,-	GDEP,ANTXR2	-27583,217964
chr1:48292538-48292863	chr1	+	48292543	48292849	True	NM_001194986,NM_004474	chr1,chr1	-,+	LOC388630,FOXD2	169763,-390905
chr6:44062467-44062724	chr6	+	44062547	44062706	True	NM_018426,NM_032111	chr6,chr6	+,-	TMEM63B,MRPL14	32669,32544
chr19:860567-860803	chr19	+	860648	860786	True	NM_001972,NM_001928,NM_005481	chr19,chr19,chr19	+,+,-	ELANE,CFD,MED16	-8408,-1034,32482
chr2:85356865-85358029	chr2	+	85357104	85357979	True	NM_006464,NM_031283	chr2,chr2	-,+	TGOLN2,TCF7L1	197454,2603
chr19:373678-374232	chr19	+	373685	374159	True	NM_016585,NM_130760,NM_199202	chr19,chr19,chr19	-,+,-	THEG,MADCAM1,THEG	1900,122330,1900
chr11:40313127-40313394	chr11	+	40313127	40313398	True	NM_020929,NM_001142930	chr11,chr11	-,+	LRRC4C,API5	2317,3020106
chr12:91377358-91378588	chr12	+	91377407	91378494	True	NM_004950,NR_028138	chr12,chr12	-,+	EPYC,LOC338758	20359,-1274726
chr11:82400794-82401780	chr11	+	82401044	82401786	True	NM_145018,NM_175885	chr11,chr11	+,-	C11orf82,FAM181B	210950,43170
chr16:82043954-82044813	chr16	+	82043977	82044804	True	NM_002153,NM_145168	chr16,chr16	+,-	HSD17B2,SDR42E1	24053,339
chr6:14857760-14858058	chr6	+	14857823	14858053	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	388473,805286
chr16:68774972-68775925	chr16	+	68775028	68775959	True	NM_004360,NM_018667	chr16,chr16	+,-	CDH1,SMPD3	-3884,-292619
chr6:131498476-131498961	chr6	+	131498535	131499000	True	NM_001431,NM_016377	chr6,chr6	-,+	EPB41L2,AKAP7	-114073,-32125
chr3:33317361-33317713	chr3	+	33317365	33317523	True	NM_012157,NM_015551,NM_001171713	chr3,chr3,chr3	+,-,+	FBXL2,SUSD5,FBXL2	1410,-56658,1413
chr6:10411267-10411887	chr6	+	10411351	10411841	True	NM_001042425,NM_001032280,NM_003220,NR_033910	chr6,chr6,chr6,chr6	-,-,-,+	TFAP2A,TFAP2A,TFAP2A,LOC100130275	8006,816,3679,709
chr16:89236971-89237529	chr16	+	89237219	89237459	True	NM_004933,NM_005187	chr16,chr16	+,-	CDH15,CBFA2T3	703,-193715
chr7:99777517-99779286	chr7	+	99778382	99779224	True	NM_152742,NM_012447	chr7,chr7	-,+	GPC2,STAG3	-3392,-2895
chrX:112074376-112074802	chrX	+	112074421	112074827	True	NM_133265,NM_001004308,NM_001113490	chrX,chrX,chrX	-,+,-	AMOT,ZCCHC16,AMOT	9266,-748219,-8067
chr20:31274258-31275085	chr20	+	31274612	31274978	True	NM_006892,NM_182584	chr20,chr20	+,-	DNMT3B,C20orf203	75212,-34829
chr10:94623594-94625290	chr10	+	94623909	94624657	True	NM_004969,NM_019053	chr10,chr10	-,+	IDE,EXOC6	-290057,-15742
chr1:206973960-206974162	chr1	+	206973973	206974201	True	NM_153758,NM_000572	chr1,chr1	+,-	IL19,IL10	-1810,-28134
chr5:68617822-68618548	chr5	+	68618113	68618220	True	NM_176816,NM_133343	chr5,chr5	-,+	CCDC125,RAD17	-1703,46903
chr19:17419071-17419334	chr19	+	17419215	17419285	True	NM_024050,NM_024527,NM_023937	chr19,chr19,chr19	+,-,+	DDA1,ABHD8,MRPL34	1051,-4933,-2789
chr5:157289122-157289519	chr5	+	157289221	157289565	True	NM_014666,NM_173491,NM_001195555,NM_001195556	chr5,chr5,chr5,chr5	-,+,-,-	CLINT1,LSM11,CLINT1,CLINT1	-3038,-118517,-3038,-3038
chr9:131417908-131418412	chr9	+	131418331	131418403	True	NM_001122821,NM_052844	chr9,chr9	+,-	SET,WDR34	27530,776
chr17:57785416-57787278	chr17	+	57785511	57787174	True	NM_030938,NM_016077	chr17,chr17	+,-	VMP1,PTRH2	-699,-655
chr4:42951098-42952587	chr4	+	42951528	42952633	True	NM_001080476,NM_006095	chr4,chr4	+,-	GRXCR1,ATP8A1	-56303,-292406
chr20:45035405-45035775	chr20	+	45035475	45035781	True	NM_152854,NM_133171,NM_182764	chr20,chr20,chr20	+,-,-	CD40,ELMO2,ELMO2	-288620,-204,-204
chr17:26796584-26797133	chr17	+	26796611	26796985	True	NM_080669,NM_003984,NM_001145976,NM_001145975,NR_027384	chr17,chr17,chr17,chr17,chr17	-,+,+,+,+	SLC46A1,SLC13A2,SLC13A2,SLC13A2,SLC13A2	-63383,3678,3678,3678,3678
chr18:32290951-32292215	chr18	+	32291063	32292249	True	NM_032978,NM_001198941,NM_003787	chr18,chr18,chr18	+,+,-	DTNA,DTNA,NOL4	-925,-925,-487548
chr9:134000011-134000893	chr9	+	134000341	134000699	True	NM_005085,NM_033387	chr9,chr9	+,-	NUP214,FAM78A	281,151258
chr14:64677989-64679689	chr14	+	64678026	64679006	True	NM_182910,NM_182913,NM_001040275	chr14,chr14,chr14	+,+,-	SYNE2,SYNE2,ESR2	3665,1852,82172
chr7:20369870-20370328	chr7	+	20369891	20370321	True	NM_182762,NM_002214	chr7,chr7	-,+	MACC1,ITGB8	-112878,403
chr10:121493704-121495164	chr10	+	121493708	121495197	True	NM_024834,NM_003252,NM_014937,NR_003251	chr10,chr10,chr10,chr10	-,-,+,+	MCMBP,TIAL1,INPP5F,INPP5F	137247,-137167,-8158,-8158
chr14:96965988-96967101	chr14	+	96966039	96966815	True	NM_018036,NM_032632	chr14,chr14	-,+	ATG2B,PAPOLA	-136361,1904
chrX:70365851-70366101	chrX	+	70365928	70366124	True	NM_001166660,NM_181303,NM_018977,NM_000206	chrX,chrX,chrX,chrX	+,+,+,-	NLGN3,NLGN3,NLGN3,IL2RG	-1298,-1298,-1298,-34447
chr17:79137642-79137934	chr17	+	79137705	79137981	True	NR_027255,NM_001080395	chr17,chr17	+,-	LOC388428,AATK	1325,1941
chr1:94583252-94583718	chr1	+	94583302	94583598	True	NM_000350,NR_030621	chr1,chr1	-,+	ABCA4,MIR760	3157,-270965
chr11:61656442-61656843	chr11	+	61656682	61656782	True	NM_001139443,NM_021727	chr11,chr11	+,-	BEST1,FADS3	60573,2274
chr2:54090990-54092520	chr2	+	54091250	54092549	True	NM_001164165,NM_006794,NM_015701	chr2,chr2,chr2	-,-,+	GPR75-ASB3,GPR75,ERLEC1	-4080,-4080,-77240
chr17:25681071-25681412	chr17	+	25681090	25681398	True	NM_000625,NM_134265	chr17,chr17	-,+	NOS2,WSB1	446207,-60035
chr6:130169010-130169577	chr6	+	130169222	130169582	True	NM_001007102,NM_001010876	chr6,chr6	+,-	L3MBTL3,C6orf191	170145,12884
chr16:30407694-30408855	chr16	+	30407836	30408776	True	NM_001142305,NM_152652,NM_052838,NM_016643	chr16,chr16,chr16,chr16	+,+,-,+	ZNF771,ZNF48,SEPT1,ZNF771	9958,-839,-13665,9958
chr11:1857440-1857807	chr11	+	1857486	1857826	True	NM_001145829,NR_036185,NM_138567,NM_001145841,NM_003282	chr11,chr11,chr11,chr11,chr11	+,-,+,+,+	TNNI2,MIR4298,SYT8,TNNI2,TNNI2	2892,22990,-1863,3605,2406
chr6:132020923-132021939	chr7	+	143955110	143956074	False	NR_002158,NM_001005328,NR_002157	chr7,chr7,chr7	-,-,-	OR2A20P,OR2A7,OR2A9P	-6414,699,-6562
chr6:132020923-132021939	chr6	+	132020930	132021894	True	NM_030908,NM_005021	chr6,chr6	-,+	OR2A4,ENPP3	699,-62546
chr9:47166274-47166692	chr9	+	47166370	47166572	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-3535640,-478855
chr14:32822689-32824079	chr14	+	32823514	32824042	True	NR_027263,NM_004274	chr14,chr14	-,+	C14orf128,AKAP6	-277609,-25086
chr12:4381523-4381856	chr12	+	4381708	4381802	True	NM_001759,NM_020638	chr12,chr12	+,-	CCND2,FGF23	1099,107142
chr3:44612742-44612944	chr3	+	44612832	44612980	True	NM_173658,NM_181489	chr3,chr3	+,-	ZNF660,ZNF445	13475,-93670
chr13:100259217-100260243	chr13	+	100259292	100259983	True	NM_004951,NM_206808	chr13,chr13	-,+	GPR183,CLYBL	-299543,-424
chr21:15869884-15870093	chr21	+	15870023	15870135	True	NR_003087,NM_022136	chr21,chr21	+,-	ABCC13,SAMSN1	-223954,48579
chr17:4737072-4737551	chr17	+	4737274	4737584	True	NM_001024937,NM_182566,NM_170663,NM_153827,NM_015716	chr17,chr17,chr17,chr17,chr17	+,-,+,+,+	MINK1,VMO1,MINK1,MINK1,MINK1	-690,-47545,-690,-690,-690
chr19:35606400-35607229	chr19	+	35606713	35607217	True	NM_001136012,NM_001136010,NM_001136011,NM_021910,NR_024562,NR_024561,NM_001136009,NM_001136008,NM_001136007,NM_005971	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,-,-,+,+,+,+	FXYD3,FXYD3,FXYD3,FXYD3,LOC100128675,LOC100128675,FXYD3,FXYD3,FXYD3,FXYD3	-32,-32,-32,-32,-9505,-9538,-32,-32,-32,-32
chr11:130655471-130655961	chr11	+	130655491	130655966	True	NM_139055,NM_014758	chr11,chr11	+,-	ADAMTS15,SNX19	-336676,130477
chr12:117534764-117535259	chr12	+	117534776	117535134	True	NM_001168325,NM_153348,NM_017899,NR_031766	chr12,chr12,chr12,chr12	-,+,-,-	TESC,FBXW8,TESC,TESC	2167,-186066,2167,2167
chr19:48739824-48740191	chr19	+	48739848	48740030	True	NR_033679,NM_001184900,NM_153608	chr19,chr19,chr19	-,-,+	CARD8,CARD8,ZNF114	4350,4350,34623
chr16:29938123-29938681	chr16	+	29938313	29938703	True	NM_178863,NM_181718	chr16,chr16	-,+	KCTD13,ASPHD1	-768,-26217
chr1:229480976-229481228	chr1	+	229480990	229481277	True	NM_145257,NM_006542	chr1,chr1	-,+	C1orf96,SPHAR	-2302,-40912
chr17:20622715-20623591	chr17	+	20622838	20623127	True	NM_001190790,NM_001004306	chr17,chr17	+,-	CDRT15L2,CCDC144NL	-139862,176381
chr6:2635585-2635875	chr6	+	2635592	2635676	True	NM_152554,NM_020135	chr6,chr6	-,+	C6orf195,WRNIP1	-294,129989
chr12:124248619-124249649	chr12	+	124248819	124249550	True	NM_207437,NM_001414	chr12,chr12	+,-	DNAH10,EIF2B1	-1833,-130496
chr3:125621511-125622312	chr3	+	125621762	125622310	True	NM_001015050,NR_024250	chr3,chr3	-,+	ALG1L,LOC100125556	33627,13133
chr4:190597537-190597750	chr4	+	190597537	190597707	True	NR_036692,NM_020040	chr4,chr4	+,-	HSP90AA4P,TUBB4Q	-203296,308367
chr17:41274996-41275799	chr17	+	41275293	41275824	True	NR_003108,NM_007299,NM_007298,NM_007297,NM_007294,NR_027676,NM_007300	chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,-,-,-,-	NBR2,BRCA1,BRCA1,BRCA1,BRCA1,BRCA1,BRCA1	1775,1694,358,1694,1726,1566,1726
chr12:6860474-6861099	chr12	+	6860613	6861076	True	NM_005439,NR_026581,NM_002824	chr12,chr12,chr12	-,-,+	MLF2,MLF2,PTMS	1057,1611,14464
chr12:123449082-123449323	chr12	+	123449109	123449293	True	NM_019625,NM_019624,NM_024623	chr12,chr12,chr12	-,-,+	ABCB9,ABCB9,OGFOD2	1813,1813,10060
chr2:240986374-240987887	chr2	+	240986401	240987705	True	NR_037808,NM_173351,NM_001080835	chr2,chr2,chr2	+,-,-	LOC150935,OR6B3,PRR21	-301898,-912,-4002
chr17:39769861-39770179	chr17	+	39769911	39770217	True	NM_005801,NM_005557	chr17,chr17	+,-	EIF1,KRT16	74909,-832
chr17:39769861-39770179	chr17	+	16737041	16737357	False	NR_026810,NR_029392	chr17,chr17	+,-	FAM106C,KRT16P2	-45301,-894
chr17:39769861-39770179	chr17	+	20408710	20409026	False	NM_001190790,NR_029393	chr17,chr17	+,-	CDRT15L2,KRT16P3	74010,-899
chr14:25521484-25523040	chr14	+	25521521	25522980	True	NM_015299,NM_014178	chr14,chr14	+,-	KHNYN,STXBP6	-622431,-2426
chr3:155411641-155413525	chr3	+	155411964	155413572	True	NM_003875,NM_014996	chr3,chr3	+,-	GMPS,PLCH1	174752,8475
chr8:142378609-142379135	chr8	+	142378649	142379043	True	NR_024441,NM_005293	chr8,chr8	+,-	LOC731779,GPR20	-28052,-1284
chr22:26826682-26828538	chr22	+	26826732	26828525	True	NM_152841,NM_020437	chr22,chr22	-,+	HPS4,ASPHD2	47076,-1504
chr16:1204496-1204917	chr16	+	1204554	1204778	True	NM_021098,NM_207419,NM_001005407	chr16,chr16,chr16	+,-,+	CACNA1H,C1QTNF8,CACNA1H	-1364,-58310,-1364
chr3:17783872-17784077	chr3	+	17783911	17784115	True	NM_014744,NM_001134380,NR_037465	chr3,chr3,chr3	-,-,+	TBC1D5,TBC1D5,MIR3714	-1512,175,-809274
chr17:4543697-4544091	chr17	+	4543758	4544119	True	NM_001140,NM_001114974	chr17,chr17	-,+	ALOX15,SMTNL2	891,-55977
chr17:4543697-4544091	chr17	-	6559338	6559418	False	NM_016060,NM_001105520	chr17,chr17	-,+	MED31,C17orf100	-4384,-4330
chr16:69984829-69985052	chr16	+	69984878	69984942	True	NM_001136214,NR_003610,NM_182619	chr16,chr16,chr16	+,-,+	CLEC18A,PDXDC2P,CLEC18A	-303,114959,-119
chr1:29215436-29215675	chr1	+	29215444	29215720	True	NM_004437,NM_203343,NM_203342,NM_001171868,NM_001166005,NM_001166007	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,-,+,+	EPB41,EPB41,EPB41,TMEM200B,EPB41,EPB41	-1892,-1892,-1892,233343,-1892,-1892
chr10:99480964-99481812	chr10	+	99481162	99481862	True	NR_026754,NM_031484	chr10,chr10	-,+	LOC100270710,MARVELD1	-3260,-7753
chr5:118324276-118324842	chr5	+	118324366	118324790	True	NM_173666,NR_036263	chr5,chr5	-,+	DTWD2,MIR1244-3	-126,-14136
chr19:1324171-1324908	chr19	+	1324170	1324764	True	NR_027271,NM_032853	chr19,chr19	-,+	C19orf23,MUM1	-53911,30211
chr13:47125812-47127083	chr13	+	47125843	47126925	True	NM_001164213,NM_001164211,NM_025113,NM_015116	chr13,chr13,chr13,chr13	+,+,-,+	LRCH1,LRCH1,C13orf18,LRCH1	370,370,-164208,370
chr13:100743704-100744333	chr13	+	100743781	100744137	True	NM_001127692,NM_001178004,NM_000282,NM_033132	chr13,chr13,chr13,chr13	+,+,+,-	PCCA,PCCA,PCCA,ZIC5	-2571,-2571,-2571,-119603
chr19:1850153-1850791	chr19	+	1850198	1850792	True	NR_034114,NM_020695	chr19,chr19	+,-	LOC100288123,REXO1	-28161,-1746
chr18:21166988-21168181	chr18	+	21167084	21168106	True	NM_013326,NM_000271	chr18,chr18	+,-	C18orf8,NPC1	-83680,-503
chr16:90037224-90038551	chr16	+	90037384	90038398	True	NR_003227,NR_003226,NM_145039,NR_003228	chr16,chr16,chr16,chr16	+,+,-,+	AFG3L1P,AFG3L1P,CENPBD1,AFG3L1P	589,589,892,589
chr20:55094781-55095797	chr20	+	55094937	55095751	True	NM_001012971,NM_080615	chr20,chr20	+,-	C20orf106,GCNT7	4033,5280
chr8:28153966-28155658	chr8	+	28154200	28155658	True	NM_018660,NM_006228	chr8,chr8	-,+	ZNF395,PNOC	88369,18990
chr15:75249707-75250012	chr15	+	75249776	75249892	True	NM_017793,NM_001178111	chr15,chr15	-,+	RPP25,SCAMP5	-1,37983
chr1:206312269-206314209	chr1	+	206312427	206313865	True	NM_001007544,NM_001910,NM_148964	chr1,chr1,chr1	-,+,+	C1orf186,CTSE,CTSE	-23780,3593,3593
chr17:74069071-74069668	chr17	+	74069159	74069716	True	NM_180990,NM_014230,NM_003857	chr17,chr17,chr17	+,-,+	ZACN,SRP68,GALR2	5546,-552,1175
chr17:3497276-3497567	chr17	+	3497492	3497592	True	NM_080705,NM_080706,NM_018727,NM_001031681	chr17,chr17,chr17,chr17	-,-,-,+	TRPV1,TRPV1,TRPV1,CTNS	1583,-1321,2794,42169
chr7:76254304-76255449	chr7	+	76254554	76255343	True	NR_029411,NM_152992,NM_012230	chr7,chr7,chr7	+,-,-	LOC100133091,POMZP3,POMZP3	-75955,1331,1331
chr7:76254304-76255449	chr7	-	72396988	72397042	False	NR_033323,NR_003602	chr7,chr7	-,+	NSUN5P2,LOC541473	28314,43149
chr7:76254304-76255449	chr7	+	75069947	75070015	False	NM_001099415,NR_033322	chr7,chr7	-,+	POM121C,NSUN5P1	45603,-30382
chr10:91008530-91010103	chr10	+	91008578	91009776	True	NM_001127605,NM_001547,NM_000235	chr10,chr10,chr10	-,+,-	LIPA,IFIT2,LIPA	1942,51929,1942
chr19:57924105-57924336	chr19	+	57924129	57924220	True	NM_020633,NM_006959	chr19,chr19	-,+	VN1R1,ZNF17	43944,-1659
chr22:36923607-36925043	chr22	+	36923882	36924890	True	NM_003753,NM_145343	chr22,chr22	-,+	EIF3D,APOL1	437,-274817
chr10:80822365-80823650	chr10	+	80822456	80823550	True	NM_020338,NR_015429,NR_024431,NR_024429	chr10,chr10,chr10,chr10	+,-,-,-	ZMIZ1,LOC283050,LOC283050,LOC283050	5241,3705,3705,3705
chr11:11879785-11881573	chr11	+	11879847	11881060	True	NM_017944,NM_001018057	chr11,chr11	+,-	USP47,DKK3	-16935,149183
chr20:62339799-62340008	chr20	+	62339895	62340051	True	NM_032527,NM_003224,NM_001195653,NM_001195654,NM_181485,NM_001083113,NM_001134758	chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,-,+,+,+,+,-	ZGPAT,ARFRP1,ZGPAT,ZGPAT,ZGPAT,ZGPAT,ARFRP1	-566,-540,-566,-566,-566,-1152,-540
chr6:7105777-7107287	chr6	+	7106106	7107259	True	NM_001003700,NM_001003699,NM_001003698,NM_001168344,NM_003144	chr6,chr6,chr6,chr6,chr6	+,+,+,+,-	RREB1,RREB1,RREB1,RREB1,SSR1	826,826,826,570,206332
chr10:49812588-49812855	chr10	+	49812635	49812863	True	NM_020945,NM_021226	chr10,chr10	+,-	WDFY4,ARHGAP22	80654,325
chr4:206911-207533	chr4	+	206997	207577	True	NM_001137608,NR_027481	chr4,chr4	-,+	ZNF732,ZNF876P	82417,-659
chr4:926407-927217	chr4	+	926446	927018	True	NM_005255,NM_032326	chr4,chr4	-,+	GAK,TMEM175	-272,-235
chr20:36662328-36662533	chr20	+	36662355	36662515	True	NM_021215,NM_014657	chr20,chr20	+,-	RPRD1B,TTI1	-458,-522
chr11:67210587-67210810	chr11	+	67210613	67210721	True	NM_020441,NM_145200,NM_206997,NM_001018070,NM_005608	chr11,chr11,chr11,chr11,chr11	-,+,-,-,-	CORO1B,CABP4,GPR152,CORO1B,PTPRCAP	312,12096,9529,592,-5460
chr2:738955-740179	chr2	+	739108	739739	True	NM_018968,NM_152834	chr2,chr2	+,-	SNTG2,TMEM18	206814,-61669
chr1:48275402-48277230	chr1	+	48275493	48277266	True	NM_001194986,NM_004474	chr1,chr1	-,+	LOC388630,FOXD2	185346,-373855
chr1:22378623-22379026	chr1	+	22378918	22379008	True	NM_001039802,NM_030761,NM_044472,NM_001791	chr1,chr1,chr1,chr1	+,-,+,+	CDC42,WNT4,CDC42,CDC42	111,90575,111,111
chr16:56650660-56651032	chr16	+	56650664	56650982	True	NR_001447,NM_175617,NM_005953,NM_005950	chr16,chr16,chr16,chr16	+,+,+,-	MT1L,MT1E,MT2A,MT1G	390,8602,-8237,51045
chr2:131674400-131674660	chr2	+	131674409	131674675	True	NM_032995,NM_015320,NM_001009993	chr2,chr2,chr2	+,+,-	ARHGEF4,ARHGEF4,FAM168B	-236,-236,176379
chr10:74387743-74388230	chr10	+	74388008	74388256	True	NM_138357,NM_006077,NM_001195518	chr10,chr10,chr10	+,-,-	CCDC109A,CBARA1,CBARA1	63632,-2059,-2059
chr16:18574442-18575174	chr16	+	18574867	18574943	True	NM_001004060,NM_173614,NR_003569	chr16,chr16,chr16	-,-,+	NOMO2,NOMO2,ABCC6P1	-1433,-1433,7626
chr7:5823054-5823686	chr7	+	5823184	5823686	True	NR_023382,NM_207111,NM_207116	chr7,chr7,chr7	+,-,-	ZNF815,RNF216,RNF216	39104,-1823,-1823
chr1:206136305-206136518	chr1	+	206136355	206136531	True	NM_001123168,NM_001007544	chr1,chr1	+,-	FAM72A,C1orf186	2379,152166
chr1:206136305-206136518	chr1	-	143915068	143915245	False	NM_207418,NR_034178	chr1,chr1	-,+	FAM72D,SRGAP2P2	-1925,502
chr1:206136305-206136518	chr1	+	120836872	120837050	False	NM_001004340,NM_001100910	chr1,chr1	-,+	FCGR1B,FAM72B	98944,1954
chr12:12848422-12849179	chr12	+	12848505	12849173	True	NM_004064,NM_006143	chr12,chr12	+,-	CDKN1B,GPR19	21128,-2
chr8:99301649-99303093	chr8	+	99302005	99302900	True	NM_024759,NM_020697	chr8,chr8	-,+	NIPAL2,KCNS2	3778,136349
chr3:15894060-15895269	chr3	+	15894363	15894813	True	NM_015199,NR_030289	chr3,chr3	-,+	ANKRD28,MIR563	6291,20464
chr5:140476655-140477374	chr5	+	140476759	140477222	True	NM_018936,NM_018937,NM_031947	chr5,chr5,chr5	+,+,-	PCDHB2,PCDHB3,SLC25A2	-2580,3011,206447
chr5:71015933-71016341	chr5	+	71016080	71016324	True	NR_033968,NM_004291	chr5,chr5	-,+	LOC100049076,CARTPT	-460958,-1142
chrX:52388845-52389843	chrX	+	52388874	52389901	True	NM_130777,NM_001097592,NM_001079538	chrX,chrX,chrX	-,+,-	XAGE2,XAGE1A,XAGE2B	-1778,121859,-2858
chrX:52388845-52389843	chrX	-	52109272	52110299	False	NR_033251,NM_130777,NM_001079538	chrX,chrX,chrX	-,+,+	XAGE1C,XAGE2,XAGE2B	149912,1778,2858
chr15:82336787-82337029	chr15	+	82336797	82336965	True	NM_032246,NM_001008226	chr15,chr15	-,+	MEX3B,FAM154B	1446,218186
chr17:18856738-18857968	chr17	+	18856958	18857866	True	NM_001042450,NM_001039999,NM_152351	chr17,chr17,chr17	+,-,+	SLC5A10,FAM83G,SLC5A10	-1531,50244,-1531
chr11:44973493-44973765	chr11	+	44973617	44973812	True	NM_006034,NR_026681,NM_001076787	chr11,chr11,chr11	-,+,-	TP53I11,LOC221122,TP53I11	-1009,21640,-1009
chr19:10121794-10122240	chr19	+	10121904	10122207	True	NM_015719,NM_015725	chr19,chr19	-,+	COL5A3,RDH8	-757,1717
chr19:36267626-36268454	chr19	+	36267639	36268251	True	NM_052948,NM_144617,NM_001172630	chr19,chr19,chr19	+,-,+	ARHGAP33,HSPB6,ARHGAP33	-1273,-19709,-1273
chr22:45806665-45807850	chr22	+	45806724	45807341	True	NM_148674,NM_015653	chr22,chr22	-,+	SMC1B,RIBC2	2209,2232
chr11:118663288-118663566	chr11	+	118663288	118663582	True	NM_001716,NM_004397	chr11,chr11	+,-	CXCR5,DDX6	90958,-1316
chr21:40686412-40687013	chr21	+	40686420	40686824	True	NM_004627,NM_001007246,NM_018963,NR_033800,NM_033656	chr21,chr21,chr21,chr21,chr21	+,-,-,-,-	WRB,BRWD1,BRWD1,NCRNA00257,BRWD1	65388,-864,-864,118,-864
chrX:154689226-154689428	chrX	+	154689258	154689454	True	NR_036049,NM_001007524,NM_001007523,NM_012151,NM_080720,NR_036260,NR_036259,NM_001017991,NM_001017990	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,-,-,-,-,+,+,-,-	MIR1184-1,F8A3,F8A2,F8A1,H2AFB3,MIR1184-3,MIR1184-2,H2AFB2,H2AFB1	-2131,-997,-997,-982,192,-2131,-2131,184,192
chrX:154689226-154689428	chrX	-	154610569	154610765	False	NR_036049,NM_001007524,NM_001007523,NM_012151,NM_080720,NR_036260,NR_036259,NM_001017991,NM_001017990	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,-,-,+,+	MIR1184-1,F8A3,F8A2,F8A1,H2AFB3,MIR1184-3,MIR1184-2,H2AFB2,H2AFB1	2132,998,998,983,-192,2132,2132,-184,-192
chrX:154689226-154689428	chrX	-	154113458	154113654	False	NR_036049,NM_001007524,NM_001007523,NM_012151,NM_080720,NR_036260,NM_019863,NR_036259,NM_001017990	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,-,-,-,+	MIR1184-1,F8A3,F8A2,F8A1,H2AFB3,MIR1184-3,F8,MIR1184-2,H2AFB1	2129,995,995,980,-192,2129,973,2129,-192
chr19:43358188-43359240	chr19	+	43358226	43359221	True	NR_026824,NR_036584	chr19,chr19	-,+	PSG10P,LOC100289650	708,-32263
chr6:107347954-107348779	chr6	+	107348129	107348533	True	NM_001080450,NM_016487,NM_001142468,NM_001142470	chr6,chr6,chr6,chr6	-,+,+,+	BEND3,C6orf203,C6orf203,C6orf203	87153,873,873,873
chr4:146099681-146100816	chr4	+	146099773	146100804	True	NM_002940,NM_017493,NM_001102653	chr4,chr4,chr4	+,-,-	ABCE1,OTUD4,OTUD4	-80675,-3877,78
chr1:64941388-64942916	chr1	+	64941512	64942960	True	NM_002227,NM_020925	chr1,chr1	-,+	JAK1,CACHD1	489277,-5088
chr4:87280166-87280840	chr4	+	87280166	87280852	True	NM_138982,NM_006264,NM_138980	chr4,chr4,chr4	-,+,-	MAPK10,PTPN13,MAPK10	573,234615,573
chr3:37902665-37902912	chr3	+	37902785	37902871	True	NM_005808,NM_001008392,NM_001130964	chr3,chr3,chr3	+,+,-	CTDSPL,CTDSPL,PLCD1	797,797,163457
chr16:75498595-75499208	chr16	+	75498611	75499072	True	NM_145254,NM_007285	chr16,chr16	-,+	TMEM170A,GABARAPL2	-27,101176
chr10:44101089-44101411	chr10	+	44101162	44101446	True	NM_001099284,NM_145312	chr10,chr10	-,+	ZNF239,ZNF485	-31096,408
chr1:149376389-149378108	chr1	+	149376452	149377717	True	NR_027484,NM_001024599	chr1,chr1	+,-	FCGR1C,HIST2H2BF	-7209,21562
chr1:149376389-149378108	chr1	+	149761388	149762654	False	NM_001161334,NM_000566	chr1,chr1	-,+	HIST2H2BF,FCGR1A	21324,-7189
chr1:149376389-149378108	chr1	-	120927555	120928836	False	NM_001004340,NR_027337,NM_001017986	chr1,chr1,chr1	-,+,-	FCGR1B,HIST2H2BA,FCGR1B	7158,-21572,7158
chr1:112532912-112533121	chr1	+	112532915	112533003	True	NM_172198,NM_007204,NM_004980	chr1,chr1,chr1	-,+,-	KCND3,DDX20,KCND3	-1138,-234776,-1138
chr11:115375407-115375668	chr11	+	115375477	115375629	True	NM_001098517,NM_182495,NM_014333	chr11,chr11,chr11	-,+,-	CADM1,FAM55B,CADM1	-236,-826329,-236
chr8:27934938-27935313	chr8	+	27935144	27935369	True	NM_018091,NM_001010906	chr8,chr8	+,-	ELP3,C8orf80	15214,6076
chr2:183770893-183771903	chr2	+	183770921	183771918	True	NM_001142314,NM_001463	chr2,chr2	+,-	DUSP19,FRZB	171368,-39423
chr7:121039721-121040309	chr7	+	121039815	121040307	True	NM_057168,NM_001040020,NM_014888	chr7,chr7,chr7	+,-,-	WNT16,FAM3C,FAM3C	-70783,-3393,-3393
chr20:5485509-5487440	chr20	+	5485830	5487444	True	NR_029405,NR_015406	chr20,chr20	+,-	LOC643406,LOC149837	-34054,-588
chr22:38435757-38437489	chr22	+	38435928	38437538	True	NM_013356,NM_001039583	chr22,chr22	-,+	SLC16A8,PICK1	41682,15723
chr3:195664103-195664984	chr3	+	195664847	195665015	True	NR_034088,NM_005781	chr3,chr3	+,-	LOC401109,TNK2	204491,-28967
chr3:195664103-195664984	chr3	+	197361935	197361993	False	NR_003266,NM_001011537	chr3,chr3	-,+	LOC220729,FYTTD1	-7183,114430
chr9:71787871-71788588	chr9	+	71787913	71788623	True	NM_001170630,NM_201629,NM_002732,NM_004817	chr9,chr9,chr9,chr9	+,+,-,+	TJP2,TJP2,PRKACG,TJP2	347,347,-158874,347
chr11:73091308-73091529	chr11	+	73091313	73091557	True	NM_152222,NM_032871,NM_015159	chr11,chr11,chr11	+,+,-	RELT,RELT,FAM168A	-3959,-3651,217721
chr8:90982688-90984219	chr8	+	90982928	90984244	True	NM_002485,NM_001359	chr8,chr8	-,+	NBN,DECR1	12705,29335
chr19:42499770-42500585	chr19	+	42499938	42500496	True	NM_152296,NM_022752	chr19,chr19	-,+	ATP1A3,ZNF574	-1556,79793
chr10:118381047-118381447	chr10	+	118381046	118381460	True	NM_005396,NM_144661	chr10,chr10	+,-	PNLIPRP2,C10orf82	-632,48071
chr7:103629307-103629540	chr7	+	103629315	103629459	True	NM_005045,NM_173054,NM_199000	chr7,chr7,chr7	-,-,+	RELN,RELN,LHFPL3	554,554,339644
chr16:1841755-1842144	chr16	+	1841759	1842037	True	NM_001146006,NM_080861,NR_027389,NM_012225,NM_004970	chr16,chr16,chr16,chr16,chr16	-,-,-,+,-	IGFALS,SPSB3,IGFALS,NUBP2,IGFALS	1747,-9178,2922,-8877,1747
chr3:169582961-169584195	chr3	+	169583070	169584134	True	NM_001080460,NM_024727	chr3,chr3	+,-	LRRIQ4,LRRC31	-43412,3580
chr16:3116343-3116637	chr16	+	3116347	3116681	True	NM_032805,NM_004221,NM_001012718,NM_001012636,NM_001012635,NM_001012634,NM_001012633,NM_001012632,NM_001012631	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	-,+,+,+,+,+,+,+,+	ZSCAN10,IL32,IL32,IL32,IL32,IL32,IL32,IL32,IL32	26230,-1085,-1085,-613,-786,-759,-1085,-735,-1085
chr1:70880117-70880375	chr1	+	70880336	70880410	True	NM_001190463,NM_153742,NM_030816,NM_001902	chr1,chr1,chr1,chr1	+,+,-,+	CTH,CTH,ANKRD13C,CTH	-3491,-3491,-59919,-3491
chr17:48277373-48278059	chr17	+	48277436	48278003	True	NM_001135697,NM_000088	chr17,chr17	+,-	SGCA,COL1A1	-34121,1047
chr3:48889049-48890795	chr3	+	48889170	48890359	True	NM_006321,NM_004157	chr3,chr3	+,-	ARIH2,PRKAR2A	65921,-3900
chr13:109885790-109886617	chr13	+	109885859	109886667	True	NM_003749,NM_001198950	chr13,chr13	-,+	IRS2,MYO16	552307,-604346
chr15:58449934-58451304	chr15	+	58450186	58451294	True	NM_020980,NM_170696	chr15,chr15	+,-	AQP9,ALDH1A2	-19835,-92280
chr11:18128600-18129480	chr11	+	18128607	18128957	True	NR_026576,NM_138421,NM_054031	chr11,chr11,chr11	-,-,+	SAA3P,SAAL1,MRGPRX3	8780,-969,13544
chr18:161221-161622	chr18	+	161222	161643	True	NM_005131,NM_005151,NM_001037334	chr18,chr18,chr18	-,+,+	THOC1,USP14,USP14	106473,-2800,-2800
chr1:85527488-85527799	chr1	+	85527487	85527849	True	NM_145172,NM_018298	chr1,chr1	+,-	WDR63,MCOLN3	143,-13318
chrX:13588561-13589003	chrX	+	13588606	13589052	True	NM_001011658,NM_001167890,NM_015507	chrX,chrX,chrX	-,+,+	TRAPPC2,EGFL6,EGFL6	163752,-964,-964
chr17:48543606-48545468	chr17	+	48543920	48545483	True	NM_018346,NM_001267	chr17,chr17	+,-	RSAD1,CHAD	10706,794
chr19:55999358-55999591	chr19	+	55999358	55999440	True	NM_024710,NM_001144950,NM_020378,NM_001195267	chr19,chr19,chr19,chr19	-,+,+,+	ISOC2,SSC5D,NAT14,SSC5D	-26309,429,-2852,429
chr9:139379496-139380018	chr9	+	139379552	139379920	True	NM_152571,NM_014866	chr9,chr9	+,-	C9orf163,SEC16A	-1656,-2045
chr12:88405675-88406642	chr12	+	88405674	88406391	True	NM_152589,NM_001009894	chr12,chr12	-,+	C12orf50,C12orf29	16843,22876
chr14:31514266-31515771	chr14	+	31514453	31515131	True	NM_014574,NM_001128126	chr14,chr14	-,+	STRN3,AP4S1	-18846,-19823
chr5:142069826-142070909	chr5	+	142069940	142070566	True	NM_001144935,NM_001135608,NM_033136,NM_000800,NM_001144934,NR_026696,NR_026695	chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,+,-,-,-,-,-	FGF1,ARHGAP26,FGF1,FGF1,FGF1,FGF1,FGF1	7119,79725,-3888,-4287,7119,7119,7119
chr3:176918053-176918920	chr3	+	176918232	176918879	True	NM_024665,NM_181361	chr3,chr3	-,+	TBL1XR1,KCNMB2	-3184,1335344
chr11:95544580-95545697	chr11	+	95544757	95545496	True	NM_144664,NM_014679	chr11,chr11	-,+	FAM76B,CEP57	-21803,-21174
chr19:1359364-1359936	chr19	+	1359370	1359978	True	NR_024247,NM_000156,NM_032853	chr19,chr19,chr19	+,-,+	MUM1,GAMT,MUM1	-3098,41624,-4445
chr18:59993265-59993508	chr18	+	59993267	59993432	True	NM_176787,NM_003839	chr18,chr18	-,+	PIGN,TNFRSF11A	-138978,-770
chr7:119258660-119260249	chr7	+	119259065	119260286	True	NM_012281,NM_012338	chr7,chr7	+,-	KCND2,TSPAN12	653435,1237942
chr10:99473108-99473350	chr10	+	99473169	99473361	True	NR_026754,NM_031484	chr10,chr10	-,+	LOC100270710,MARVELD1	4591,103
chr16:5011128-5011623	chr16	+	5011305	5011671	True	NM_014692,NM_002705	chr16,chr16	+,-	SEC14L5,PPL	-3044,-24169
chr19:2016512-2017914	chr19	+	2016516	2017406	True	NM_001319,NM_017797	chr19,chr19	+,-	CSNK1G2,BTBD2	-75406,-814
chr18:63430206-63431142	chr18	+	63430421	63431156	True	NM_021153,NM_004361	chr18,chr18	-,+	CDH19,CDH7	840117,-12323
chr11:64108367-64108805	chr11	+	64108409	64108821	True	NM_032251,NM_016404	chr11,chr11	+,-	CCDC88B,TRMT112	-770,-23376
chr5:156883756-156884699	chr5	+	156883908	156884609	True	NM_001099287,NM_001001343,NM_001172292	chr5,chr5,chr5	+,-,+	NIPAL4,FNDC9,NIPAL4	2417,-111179,2417
chr8:66556564-66556829	chr8	+	66556597	66556698	True	NM_018120,NM_014637,NM_001145839	chr8,chr8,chr8	-,+,+	ARMC1,MTFR1,MTFR1	-10145,189,189
chr15:82655761-82657160	chr15	+	82655913	82657022	True	NR_004847,NR_024474,NM_001164465	chr15,chr15,chr15	+,+,-	UBE2Q2P2,UBE2Q2P3,GOLGA6L10	-8681,-8681,-14207
chr15:82655761-82657160	chr15	-	82788645	82789462	False	NR_026811,NR_033936,NR_033579	chr15,chr15,chr15	-,-,+	LOC80154,LOC727849,LOC440297	8925,8954,-35256
chr15:82655761-82657160	chr15	-	83173222	83174039	False	NR_026811,NR_033936,NR_033579	chr15,chr15,chr15	-,-,+	LOC80154,LOC727849,LOC440297	8926,8955,-43247
chr15:82655761-82657160	chr15	+	83032410	83033519	False	NR_004847,NR_024474,NM_001164465	chr15,chr15,chr15	+,+,-	UBE2Q2P2,UBE2Q2P3,GOLGA6L10	-8691,-8691,-14212
chr19:12997890-12998511	chr19	+	12997904	12998433	True	NM_006563,NM_001375,NM_000159,NM_013976	chr19,chr19,chr19,chr19	-,-,+,+	KLF1,DNASE2,GCDH,GCDH	-29,-5569,3540,3540
chr6:72596848-72597068	chr6	+	72596868	72596956	True	NR_026807,NM_014989	chr6,chr6	-,+	C6orf155,RIMS1	-466420,-269
chr12:123754614-123755006	chr12	+	123754708	123754998	True	NM_001143905,NM_004642	chr12,chr12	+,-	C12orf65,CDK2AP1	-36468,1739
chr14:92132136-92132642	chr14	+	92132408	92132470	True	NM_024764,NM_017437	chr14,chr14	-,+	CATSPERB,CPSF2	65995,455827
chr1:2408056-2408281	chr1	+	2408058	2408330	True	NM_014638,NM_018216	chr1,chr1	+,-	PLCH2,PANK4	-355,49755
chr1:32688388-32689179	chr1	+	32688691	32688863	True	NM_003757,NM_019118	chr1,chr1	+,-	EIF3I,TMEM234	-771,-765
chr21:15052409-15052616	chr18	-	14475292	14475534	False	NR_024076,NR_026756	chr18,chr18	-,+	CXADRP3,LOC284233	23221,-137921
chr21:15052409-15052616	chr21	+	15052413	15052655	True	NR_026755,NM_174981	chr21,chr21	-,+	C21orf15,POTED	168080,-69966
chr11:30591034-30591445	chr11	+	30591100	30591462	True	NM_001584,NM_152316	chr11,chr11	-,+	MPPED2,C11orf46	10628,-246504
chr4:56682842-56683230	chr4	+	56682894	56683051	True	NR_003935,NM_006681	chr4,chr4	+,-	LOC644145,NMU	3185,-180429
chr18:25757801-25758061	chr18	+	25757805	25758081	True	NR_026908,NM_001792	chr18,chr18	+,-	C18orf16,CDH2	-1312584,-360
chrX:119292421-119292665	chrX	+	119292493	119292697	True	NM_139282,NM_032498,NM_001099685	chrX,chrX,chrX	-,+,+	RHOXF1,RHOXF2,RHOXF2B	-42646,-77,-77
chrX:119292421-119292665	chrX	-	119211476	119211680	False	NM_032498,NM_001099685	chrX,chrX	-,-	RHOXF2,RHOXF2B	77,77
chr6:34713570-34714955	chr6	+	34713676	34714754	True	NM_024294,NM_003093	chr6,chr6	-,+	C6orf106,SNRPC	-49051,10116
chrX:128876072-128876324	chrX	+	128876096	128876296	True	NM_017413,NM_003399	chrX,chrX	-,+	APLN,XPNPEP2	-87163,-3201
chr20:47664280-47665158	chr20	+	47664334	47665176	True	NM_001037328,NM_001316	chr20,chr20	-,+	STAU1,CSE1L	139778,-1547
chr17:41736879-41737511	chr17	+	41736897	41737545	True	NM_001136483,NM_013999,NM_001040002,NM_004527	chr17,chr17,chr17,chr17	+,-,-,-	C17orf105,MEOX1,MEOX1,MEOX1	120257,1436,1767,1436
chr11:35160569-35160780	chr11	+	35160570	35160724	True	NM_001001390,NM_001001391,NM_001001392,NM_000610,NM_001202555,NM_001202557,NM_001202556,NM_015957,NM_001001389	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,+,+,-,+	CD44,CD44,CD44,CD44,CD44,CD44,CD44,APIP,CD44	-204,-204,-204,-204,-204,-204,-204,-222631,-204
chr19:39896780-39897303	chr19	+	39896913	39897333	True	NM_019088,NM_003407,NM_022835	chr19,chr19,chr19	-,+,+	PAF1,ZFP36,PLEKHG2	-15234,153,6416
chr19:50464350-50465093	chr19	+	50464426	50464968	True	NM_001135163,NM_052884,NR_002825	chr19,chr19,chr19	-,-,+	SIGLEC11,SIGLEC11,SIGLEC16	3,3,7943
chr7:73154385-73155379	chr7	+	73155099	73155417	True	NM_148912,NM_148913,NR_026910,NR_026912,NR_026690,NM_001145364	chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,+,-	ABHD11,ABHD11,ABHD11,ABHD11,WBSCR26,ABHD11	-1915,-1915,-1915,-1909,-5751,-1915
chr4:184018663-184018890	chr4	+	184018706	184018848	True	NR_024008,NM_024949	chr4,chr4	-,+	C4orf38,WWC2	1554,1614
chr14:24712194-24712775	chr14	+	24712215	24712289	True	NM_001099274,NM_012461,NM_016576	chr14,chr14,chr14	-,-,+	TINF2,TINF2,GMPR2	-335,-335,-10163
chr10:54534994-54536123	chr10	+	54535084	54536139	True	NM_012242,NM_000242	chr10,chr10	+,-	DKK1,MBL2	-461094,-3624
chr6:49428192-49429404	chr6	+	49428194	49429154	True	NM_000255,NM_018132	chr6,chr6	-,+	MUT,CENPQ	1943,1941
chr9:34458760-34459232	chr9	+	34458856	34459146	True	NM_001184941,NM_001184940,NM_001184943,NM_001184942,NM_001184945,NM_012144,NM_147202	chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,-,-,-,-,+,-	C9orf25,C9orf25,C9orf25,C9orf25,C9orf25,DNAI1,C9orf25	-288,-288,-288,-288,-288,-96,-288
chr19:22011871-22012878	chr19	+	22012060	22012748	True	NR_024523,NM_003423	chr19,chr19	+,-	LOC641367,ZNF43	-78571,6283
chr19:44221244-44221745	chr19	+	44221315	44221667	True	NM_019108,NM_019612	chr19,chr19	-,+	C19orf61,IRGC	37525,-1152
chr17:79882895-79883288	chr17	+	79883084	79883250	True	NM_002359,NM_016538,NR_015454,NM_032711	chr17,chr17,chr17,chr17	-,-,+,-	MAFG,SIRT7,LOC92659,MAFG	2388,-7026,2454,-1676
chrX:154688438-154688699	chrX	+	154688599	154688659	True	NR_036049,NM_001007524,NM_080720,NM_012151,NM_001007523,NR_036260,NR_036259,NM_001017991,NM_001017990	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,-,-,-,-,+,+,-,-	MIR1184-1,F8A3,H2AFB3,F8A1,F8A2,MIR1184-3,MIR1184-2,H2AFB2,H2AFB1	-1472,-338,987,-323,-338,-1472,-1472,979,987
chrX:154688438-154688699	chrX	-	154611365	154611425	False	NR_036049,NM_001007524,NM_080720,NM_012151,NM_001007523,NR_036260,NR_036259,NM_001017991,NM_001017990	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,-,-,+,+	MIR1184-1,F8A3,H2AFB3,F8A1,F8A2,MIR1184-3,MIR1184-2,H2AFB2,H2AFB1	1472,338,-988,323,338,1472,1472,-980,-988
chr17:3573315-3574428	chr17	+	3573482	3574254	True	NM_001204698,NM_001014764,NM_014604,NM_031298	chr17,chr17,chr17,chr17	-,+,-,+	TAX1BP3,TMEM93,TAX1BP3,TMEM93	-1509,-1453,-1509,-1453
chr15:75742999-75743203	chr15	+	75743025	75743205	True	NM_001145357,NM_015477,NM_024608,NM_001145358	chr15,chr15,chr15,chr15	-,-,+,-	SIN3A,SIN3A,NEIL1,SIN3A	4969,771,-103745,932
chr8:117783478-117783973	chr8	+	117783726	117783962	True	NM_003756,NM_032334	chr8,chr8	-,+	EIF3H,UTP23	-15664,-5042
chr1:236692804-236694488	chr1	+	236693293	236694517	True	NM_201544,NM_201543,NR_034040,NM_006499	chr1,chr1,chr1,chr1	+,+,-,+	LGALS8,LGALS8,LOC100287902,LGALS8	-6328,-6616,-5485,-6616
chr8:87687455-87689008	chr8	+	87688136	87689034	True	NM_019098,NM_003909	chr8,chr8	-,+	CNGB3,CPNE3	66919,-161531
chr15:85110831-85111205	chr15	+	85111173	85111247	True	NM_017894,NR_003661	chr15,chr15	+,-	ZSCAN2,UBE2Q2P1	33001,2829
chr2:130940270-130941284	chr2	+	130940607	130941223	True	NM_017951,NM_025029,NM_017751,NR_033232,NR_033231,NR_033230,NM_001171083	chr2,chr2,chr2,chr2,chr2,chr2,chr2	-,+,-,-,-,-,-	SMPD4,MZT2B,SMPD4,SMPD4,SMPD4,SMPD4,SMPD4	-1277,-1157,-1277,-1277,-1277,-284,-1277
chr2:130940270-130941284	chr2	-	132248965	132249015	False	NM_001085365,NR_026922	chr2,chr2	-,+	MZT2A,LOC150776	1099,1370
chr8:11659324-11659745	chr8	+	11659504	11659764	True	NM_004462,NM_001908	chr8,chr8	+,-	FDFT1,CTSB	425,65932
chr7:1023642-1023976	chr7	+	1023681	1023861	True	NM_017781,NM_001031617	chr7,chr7	+,-	CYP2W1,COX19	-897,-8446
chr19:9879882-9880511	chr19	+	9880187	9880296	True	NM_001048241,NM_001077624	chr19,chr19	+,-	UBL5,ZNF846	58271,-777
chr14:94858715-94860685	chr14	+	94858770	94860537	True	NM_001127704,NM_001127705,NM_001127706,NM_001127707,NM_001127700,NM_001127701,NM_001127702,NM_001127703,NM_006215,NM_001002236,NM_001002235,NM_000295	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	-,-,-,-,-,-,-,-,+,-,-,-	SERPINA1,SERPINA1,SERPINA1,SERPINA1,SERPINA1,SERPINA1,SERPINA1,SERPINA1,SERPINA4,SERPINA1,SERPINA1,SERPINA1	-1741,-1741,-1741,-1741,-1741,-1741,-1741,-1741,167245,-1741,-1741,-3617
chr16:28502110-28502619	chr16	+	28502453	28502645	True	NM_001042432,NM_018690,NM_000086	chr16,chr16,chr16	-,+,-	CLN3,APOBR,CLN3	1029,3347,809
chr15:41576415-41577172	chr15	+	41576578	41577196	True	NM_007280,NR_026757	chr15,chr15	-,+	OIP5,LOC729082	47673,-428
chr1:144311498-144311704	chr1	+	144311513	144311731	True	NR_024510,NM_001037675	chr1,chr1	-,+	LOC728855,NBPF9	29092,303227
chr1:144311498-144311704	chr1	+	144491742	144491802	False	NR_024584,NM_001037675	chr1,chr1	-,+	LOC728875,NBPF9	30217,123156
chr9:138594640-138594904	chr9	+	138594701	138594939	True	NM_020822,NM_001012415,NM_001101677	chr9,chr9,chr9	+,-,-	KCNT1,SOHLH1,SOHLH1	-721,-3327,-3327
chr8:10532223-10532740	chr8	+	10532230	10532722	True	NM_001040032,NM_178857	chr8,chr8	+,-	C8orf74,RP1L1	-2134,-19613
chrX:6139278-6140280	chrX	+	6139560	6140310	True	NM_020742,NM_000351,NM_181332	chrX,chrX,chrX	-,+,-	NLGN4X,STS,NLGN4X	5628,997161,6446
chr17:20677302-20678762	chr17	+	20677673	20678446	True	NM_001190790,NM_001004306	chr17,chr17	+,-	CDRT15L2,CCDC144NL	-194698,121066
chr11:58674113-58674622	chr11	+	58674122	58674604	True	NM_145016,NM_080661	chr11,chr11	-,+	GLYATL2,GLYATL1	-62125,36117
chr9:115913804-115915312	chr9	+	115913943	115915203	True	NM_001860,NR_024376	chr9,chr9	+,-	SLC31A2,NCRNA00256B	-756,-39986
chr3:57993929-57994157	chr3	+	57994000	57994191	True	NM_001164317,NM_001457,NM_004944,NM_001164318,NM_001164319	chr3,chr3,chr3,chr3,chr3	+,+,-,+,+	FLNB,FLNB,DNASE1L3,FLNB,FLNB	56,56,206257,56,56
chr15:85111205-85112782	chr15	+	85111269	85111681	True	NM_017894,NR_003661	chr15,chr15	+,-	ZSCAN2,UBE2Q2P1	32567,2401
chr5:1445863-1446097	chr5	+	1445863	1446140	True	NM_182632,NM_001044	chr5,chr5	+,-	SLC6A18,SLC6A3	-220444,-320
chr5:786800-787033	chr5	+	786853	787002	True	NM_001166260,NM_024786	chr5,chr5	+,-	TRIP13,ZDHHC11	105966,64150
chr5:786800-787033	chr5	+	695521	695607	False	NM_018140,NM_007030	chr5,chr5	+,-	CEP72,TPPP	-83168,-2011
chr20:35886840-35887119	chr20	+	35886845	35887111	True	NM_021081,NM_001003897,NM_001184731	chr20,chr20,chr20	-,+,-	GHRH,MANBAL,GHRH	-1546,30939,-1546
chr6:47005890-47007467	chr6	+	47006081	47007390	True	NM_025048,NM_153840,NM_005588	chr6,chr6,chr6	-,-,+	GPR110,GPR110,MEP1A	2750,2750,-245043
chr12:111054218-111055737	chr12	+	111054376	111055022	True	NM_139283,NM_001082538,NM_001082537,NM_024549,NM_001173976,NM_001173975	chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,+,+,+	PPTC7,TCTN1,TCTN1,TCTN1,TCTN1,TCTN1	-33312,-2604,-2604,-2604,-2604,-2524
chr14:61443788-61444754	chr14	+	61443921	61444794	True	NM_001172702,NM_020810,NM_153811,NR_033344	chr14,chr14,chr14,chr14	+,-,+,+	SLC38A6,TRMT5,SLC38A6,SLC38A6	3037,3038,3037,3170
chr10:127372751-127374643	chr10	+	127372852	127374412	True	NR_033848,NM_001128202	chr10,chr10	+,-	LOC283038,C10orf122	-1091,-1139
chr1:155881567-155881932	chr1	+	155881595	155881903	True	NR_002974,NM_006912,NM_181885	chr1,chr1,chr1	-,-,+	SNORA42,RIT1,RXFP4	7980,-418,29576
chr9:20669032-20670736	chr9	+	20669126	20670097	True	NM_004529,NM_017794	chr9,chr9	-,+	MLLT3,KIAA1797	-46612,-10868
chr1:109949906-109951403	chr1	+	109949961	109951212	True	NM_001040709,NM_002959	chr1,chr1	+,-	SYPL2,SORT1	57887,-9398
chr10:102133430-102133824	chr10	+	102133459	102133839	True	NM_016112,NR_026762	chr10,chr10	-,+	PKD2L1,NCRNA00263	-43216,-177
chr16:66639719-66640615	chr16	+	66639798	66640554	True	NM_181553,NM_144601,NR_037619,NM_004614,NR_037613	chr16,chr16,chr16,chr16,chr16	+,+,+,-,+	CMTM3,CMTM3,CMTM3,TK2,CMTM3	-1282,-1621,-1215,-55483,-1914
chr7:129911869-129912395	chr7	+	129911923	129912415	True	NM_001869,NM_032842	chr7,chr7	+,-	CPA2,TMEM209	-5271,-66585
chr1:38455435-38455679	chr1	+	38455464	38455692	True	NM_016037,NM_006802	chr1,chr1	+,-	UTP11L,SF3A3	22691,119
chr17:5486061-5486766	chr17	+	5486293	5486791	True	NM_014922,NM_024039,NM_033004,NM_033007,NM_033006,NM_001033053	chr17,chr17,chr17,chr17,chr17,chr17	-,+,-,-,-,-	NLRP1,MIS12,NLRP1,NLRP1,NLRP1,NLRP1	1091,-96109,1091,1091,1091,1091
chr15:22571280-22571751	chr15	+	22571290	22571610	True	NR_027407,NR_033735	chr15,chr15	-,+	GOLGA8DP,REREP3	144180,-24776
chr3:183770675-183771516	chr3	+	183770730	183771474	True	NM_001023587,NM_130770	chr3,chr3	-,+	ABCC5,HTR3C	-35003,54
chr1:151370242-151370643	chr1	+	151370332	151370653	True	NM_003944,NM_002796	chr1,chr1	-,+	SELENBP1,PSMB4	-25168,1387
chr3:128996173-128996423	chr3	+	128996178	128996298	True	NM_006026,NM_001006109,NM_020187	chr3,chr3,chr3	-,+,+	H1FX,C3orf37,C3orf37	38872,1518,1385
chrX:114473403-114473877	chrX	+	114473556	114473784	True	NM_001145346,NM_020871	chrX,chrX	+,-	RBMXL3,LRCH2	-49652,-4921
chr1:64063942-64065128	chr1	+	64064106	64064786	True	NM_001172819,NM_014288,NM_002633	chr1,chr1,chr1	+,-,+	PGM1,ITGB3BP,PGM1	-4688,-75271,-5221
chr12:19407194-19407474	chr12	+	19407195	19407481	True	NM_019012,NM_033123	chr12,chr12	+,-	PLEKHA5,PLCZ1	-124627,-516277
chr11:62011964-62013419	chr11	+	62012261	62013069	True	NM_206998,NM_006551	chr11,chr11	-,+	SCGB1D4,SCGB1D2	53517,-2589
chr10:45800223-45801755	chr10	+	45800849	45801419	True	NM_001004297,NM_000698	chr10,chr10	-,+	OR13A1,ALOX5	9687,68209
chr7:130083384-130084911	chr7	+	130083582	130084877	True	NM_177524,NM_018718	chr7,chr7	+,-	MEST,TSGA14	41168,-2728
chr19:49198620-49199014	chr19	+	49198786	49198960	True	NM_001097638,NM_000511,NM_182574	chr19,chr19,chr19	+,+,-	FUT2,FUT2,MAMSTR	267,267,21304
chr12:1803100-1804272	chr12	+	1803214	1804047	True	NM_024551,NR_037422	chr12,chr12	+,-	ADIPOR2,MIR3649	-3029,-33668
chr1:203594378-203595059	chr1	+	203594512	203595097	True	NM_002023,NM_001684,NM_001001396	chr1,chr1,chr1	-,+,+	FMOD,ATP2B4,ATP2B4	-274223,830,830
chr17:13925452-13925887	chr17	+	13925541	13925902	True	NR_003261,NM_001007530	chr17,chr17	+,-	CDRT15P,CDRT15	1912,214299
chr17:13925452-13925887	chr17	-	14142072	14142433	False	NM_001007530,NM_006041	chr17,chr17	-,+	CDRT15,HS3ST3B1	-1922,62072
chr5:14583652-14584458	chr5	+	14583665	14584455	True	NM_019018,NR_037899	chr5,chr5	+,-	FAM105A,LOC100128508	-1825,192736
chr9:139684493-139685249	chr9	+	139684891	139685247	True	NM_001039374,NM_032928,NR_024580	chr9,chr9,chr9	+,+,-	KIAA1984,TMEM141,LOC100131193	5542,529,18103
chr5:16180732-16180932	chr5	+	16180757	16180978	True	NM_012304,NM_001102562	chr5,chr5	+,-	FBXL7,MARCH11	-680503,-860
chr11:67059188-67059450	chr11	+	67059192	67059428	True	NM_021173,NR_030767,NM_207354	chr11,chr11,chr11	-,+,+	POLD4,ANKRD13D,ANKRD13D	61674,-2427,-2481
chrX:133931340-133932144	chrX	+	133931406	133931830	True	NM_001170779,NM_001170782,NM_001166599,NM_001170757,NM_001170756,NM_001166600,NM_001170783,NM_001170784,NM_001170780,NM_138819,NM_001170781,NM_145284	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,-,-,-,-,+,+,+,+,+,-	FAM122C,FAM122C,FAM122B,FAM122B,FAM122B,FAM122B,FAM122C,FAM122C,FAM122C,FAM122C,FAM122C,FAM122B	9392,9374,-221,-144,-1021,-144,9392,9374,-1015,9392,9392,-1021
chr12:93160250-93161955	chr12	+	93160689	93161712	True	NM_001004330,NM_003566	chr12,chr12	+,-	PLEKHG7,EEA1	-30482,161445
chr8:145559384-145559625	chr8	+	145559384	145559624	True	NM_024531,NM_012079,NM_031309	chr8,chr8,chr8	+,-,-	GPR172A,DGAT1,SCRT1	22600,-8817,369
chr1:23517512-23518547	chr1	+	23517829	23518435	True	NR_036057,NM_000864	chr1,chr1	+,-	MIR3115,HTR1D	-147082,2851
chr15:75638833-75639227	chr15	+	75639086	75639204	True	NR_030360,NM_024608	chr15,chr15	-,+	MIR631,NEIL1	6872,126
chr6:36412961-36413962	chr6	+	36413060	36413781	True	NM_173562,NM_152990	chr6,chr6	+,-	KCTD20,PXT1	-2574,-2394
chr12:58165875-58166265	chr12	+	58165881	58166307	True	NM_206914,NM_023033,NM_005371,NM_015433,NM_000785	chr12,chr12,chr12,chr12,chr12	+,-,-,+,-	METTL21B,METTL1,METTL1,METTL21B,CYP27B1	75,5,5,75,-4905
chr20:3825816-3826307	chr20	+	3825998	3826266	True	NM_001810,NM_020746,NR_037922,NR_037921	chr20,chr20,chr20,chr20	-,+,+,+	CENPB,MAVS,MAVS,MAVS	-58661,1179,1179,1179
chr2:68544287-68545179	chr2	+	68544431	68544974	True	NM_015463,NM_002664,NM_001111101	chr2,chr2,chr2	-,+,-	CNRIP1,PLEK,CNRIP1	2260,47347,2260
chr17:41048382-41049308	chr17	+	41048771	41049148	True	NM_000151,NR_027254	chr17,chr17	+,-	G6PC,LOC388387	3666,1660
chr17:7219056-7219259	chr17	+	7219083	7219308	True	NM_001970,NM_001143761,NM_004489,NM_001143760,NM_001143762	chr17,chr17,chr17,chr17,chr17	+,+,-,+,+	EIF5A,EIF5A,GPS2,EIF5A,EIF5A	-8281,-7849,-425,-8819,-7443
chr17:41993335-41994382	chr17	+	41993574	41994398	True	NR_026770,NM_005374	chr17,chr17	+,-	C17orf88,MPP2	177,-8461
chr18:61089337-61089593	chr18	+	61089443	61089641	True	NM_004869,NM_002639	chr18,chr18	-,+	VPS4B,SERPINB5	161,54502
chr11:55680667-55681275	chr11	+	55680952	55681313	True	NM_032681,NM_001001960	chr11,chr11	+,-	SPRYD5,OR5W2	-30241,795
chr12:123593382-123594805	chr12	+	123593398	123594435	True	NM_020845,NM_152269	chr12,chr12	-,+	PITPNM2,C12orf65	597,123408
chr15:83216806-83218241	chr15	+	83217182	83218276	True	NM_001199057,NR_033579,NM_001021	chr15,chr15,chr15	-,+,-	LOC100505503,LOC440297,RPS17	-7974,-87207,-7974
chr1:244815270-244816053	chr1	+	244815300	244815948	True	NR_026778,NM_016076	chr1,chr1	-,+	NCRNA00201,PPPDE1	194345,403
chr13:92000701-92000961	chr13	+	92000713	92001009	True	NR_029490,NR_029492,NR_029508,NR_029489,NR_029488,NR_029487,NR_027039,NR_027349,NR_027350	chr13,chr13,chr13,chr13,chr13,chr13,chr13,chr13,chr13	+,+,+,+,+,+,-,+,+	MIR19B1,MIR20A,MIR92A1,MIR19A,MIR18A,MIR17,LOC144776,MIR17HG,MIR17HG	2436,2309,2558,2135,1995,1849,-421862,-690,-690
chr4:124317953-124318217	chr4	+	124317956	124318272	True	NM_198041,NM_199327,NM_005841	chr4,chr4,chr4	-,+,+	NUDT6,SPRY1,SPRY1	-473833,-51,2410
chr7:66096804-66097194	chr7	+	66096828	66097195	True	NM_153033,NM_001167961,NR_002933	chr7,chr7,chr7	+,+,-	KCTD7,KCTD7,LOC493754	-3012,-3012,-53330
chr5:76249027-76249293	chr5	+	76249053	76249315	True	NR_003014,NM_001882	chr5,chr5	-,+	SNORA47,CRHBP	127131,-424
chr16:4984913-4985694	chr16	+	4985032	4985640	True	NM_014692,NM_002705	chr16,chr16	+,-	SEC14L5,PPL	22677,1546
chrX:76709690-76710000	chrX	+	76709695	76709843	True	NM_003868,NM_000489	chrX,chrX	+,-	FGF16,ATRX	-99,331931
chr17:29232460-29232879	chr17	+	29232680	29232844	True	NM_024683,NM_018404	chr17,chr17	-,+	C17orf42,ADAP2	492,15909
chr4:1871708-1871938	chr4	+	1871715	1871940	True	NM_012318,NM_001042424	chr4,chr4	-,+	LETM1,WHSC1	-13741,1182
chr5:140725439-140725806	chr5	+	140725758	140725834	True	NM_032095,NM_018922,NM_005642,NM_032009,NM_032053,NM_032011,NM_018915,NM_018916,NM_018917	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,-,+,+,+,+,+,+	PCDHGB1,PCDHGB1,TAF7,PCDHGA2,PCDHGA4,PCDHGA3,PCDHGA2,PCDHGA3,PCDHGA4	3993,3993,-25407,-7455,8933,-2208,-7455,-2208,8933
chr10:6133315-6134468	chr10	+	6133413	6134282	True	NM_001145547,NM_032905,NM_000417	chr10,chr10,chr10	+,+,-	RBM17,RBM17,IL2RA	-2155,-2515,-29080
chr18:32814963-32816005	chr18	+	32815239	32816023	True	NM_001135178,NM_001112734,NM_032347	chr18,chr18,chr18	+,-,+	ZNF397,ZSCAN30,ZNF397	4970,54225,4970
chr20:18547715-18547939	chr20	+	18547796	18547950	True	NM_006606,NR_015432	chr20,chr20	-,+	RBBP9,LOC388789	-69909,122
chr2:173027345-173028920	chr2	+	173027415	173028728	True	NM_178120,NM_004405	chr2,chr2	+,-	DLX1,DLX2	-77258,-59937
chrX:114823509-114824466	chrX	+	114823668	114824512	True	NM_001136025,NM_020871,NM_001172335	chrX,chrX,chrX	+,-,+	PLS3,LRCH2,PLS3	3306,-355033,3306
chr22:50526342-50526958	chr22	+	50526462	50526731	True	NM_139202,NM_018995,NM_015166,NM_001164105,NM_001164104	chr22,chr22,chr22,chr22,chr22	-,+,-,+,+	MLC1,MOV10L1,MLC1,MOV10L1,MOV10L1	-2681,1703,-2104,1953,1703
chrX:107018528-107018830	chrX	+	107018593	107018861	True	NM_198057,NM_012216	chrX,chrX	-,+	TSC22D3,MID2	206,50222
chr8:70856046-70858031	chr8	+	70856317	70858026	True	NM_001128206,NM_030958	chr8,chr8	+,-	SULF1,SLCO5A1	-451340,-109018
chrX:89175613-89176269	chrY	+	3446149	3446293	False	NM_003140,NM_139214	chrY,chrY	-,+	SRY,TGIF2LY	-790357,832
chrX:89175613-89176269	chrX	+	89175964	89176108	True	NM_138960,NM_004538	chrX,chrX	+,-	TGIF2LX,NAP1L3	831,3752624
chrX:50045007-50046304	chrX	+	50045257	50046073	True	NM_003886,NM_033670	chrX,chrX	-,+	AKAP4,CCNB3	-79593,-17768
chr18:3878916-3879201	chr18	+	3878947	3879167	True	NR_024101,NM_004746	chr18,chr18	+,-	FLJ35776,DLGAP1	-284886,1018
chr2:223549336-223550139	chr2	+	223549702	223550177	True	NM_058165,NM_005687	chr2,chr2	+,-	MOGAT1,FARSB	-13306,-28875
chr19:52772353-52772803	chr19	+	52772376	52772739	True	NM_001010851,NM_001102657	chr19,chr19	+,-	ZNF766,ZNF836	84,-97480
chr3:149687096-149687974	chr3	+	149687290	149687979	True	NM_053024,NM_002628,NR_036538	chr3,chr3,chr3	-,-,+	PFN2,PFN2,LOC646903	812,812,1086
chr7:100239314-100239630	chr7	+	100239352	100239676	True	NM_003227,NM_023948	chr7,chr7	-,+	TFR2,MOSPD3	-179,-29289
chr3:10207713-10209257	chr3	+	10207875	10208743	True	NM_001570,NM_001164839	chr3,chr3	+,-	IRAK2,C3orf24	-1380,-57960
chr16:30708215-30709482	chr16	+	30708281	30709501	True	NM_001014979,NM_006662	chr16,chr16	-,+	C16orf93,SRCAP	64114,960
chr21:45979602-45980517	chr21	+	45979632	45979868	True	NM_198696,NM_198687,NM_198693	chr21,chr21,chr21	-,+,-	KRTAP10-3,KRTAP10-4,KRTAP10-2	-989,13737,-8244
chr17:38471062-38473022	chr17	+	38471252	38473057	True	NM_000964,NM_001145301,NM_001145302,NM_152219	chr17,chr17,chr17,chr17	+,+,+,-	RARA,RARA,RARA,GJD3	-5880,1415,1415,47938
chr1:20205793-20206723	chr1	+	20205986	20206624	True	NM_015207,NM_014589	chr1,chr1	+,-	OTUD3,PLA2G2E	2263,43542
chr1:35496726-35497060	chr1	+	35496775	35497096	True	NM_024772,NM_007167	chr1,chr1	+,-	ZMYM1,ZMYM6	47875,523
chr19:53898203-53898405	chr19	+	53898214	53898454	True	NM_001040185,NM_033341	chr19,chr19	+,-	ZNF765,BIRC8	-28,-103339
chr2:170377237-170379013	chr2	+	170377426	170378969	True	NM_006063,NM_024622	chr2,chr2	+,-	KBTBD10,FASTKD1	-11266,51506
chr10:133998524-133999085	chr10	+	133998552	133998858	True	NM_006426,NM_173575	chr10,chr10	+,-	DPYSL4,STK32C	1555,122669
chr17:6675880-6676439	chr17	+	6676080	6676485	True	NM_053285,NM_153230	chr17,chr17	-,+	TEKT1,FBXO39	58632,3066
chr10:105213965-105214519	chr10	+	105214063	105214519	True	NR_024552,NM_015916,NM_004210,NM_001001412	chr10,chr10,chr10,chr10	-,-,+,-	CALHM2,CALHM2,NEURL,CALHM1	-1901,-1901,39215,4179
chr3:190122938-190124822	chr3	+	190123423	190124874	True	NM_207316,NM_006580	chr3,chr3	-,+	TMEM207,CLDN16	42847,-17817
chr7:128050273-128051047	chr7	+	128050349	128050860	True	NM_000883,NM_001142576,NM_001142574,NM_001142575,NM_001142573,NM_183243,NM_001098786,NM_001102605	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,-,+,-	IMPDH1,IMPDH1,IMPDH1,IMPDH1,IMPDH1,IMPDH1,C7orf68,IMPDH1	-313,-313,-4325,-4325,-4325,-313,45023,-313
chr7:63703234-63704550	chr7	+	63703289	63704277	True	NM_178558,NM_153363	chr7,chr7	-,+	ZNF680,ZNF679	319278,-14488
chr10:88730190-88730435	chr10	+	88730233	88730383	True	NM_024756,NM_133447,NM_006829	chr10,chr10,chr10	-,+,+	MMRN2,AGAP11,C10orf116	-12808,114,-2096
chr3:148713069-148714610	chr3	+	148713170	148714659	True	NM_001184721,NM_001184720,NM_004130,NM_003071	chr3,chr3,chr3,chr3	+,+,+,-	GYG1,GYG1,GYG1,HLTF	-4031,-4031,-4031,89739
chr1:154147729-154149377	chr1	+	154147865	154149125	True	NM_001043352,NM_001043353,NM_153649,NM_001043351,NM_001127320	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	TPM3,TPM3,TPM3,TPM3,UBAP2L	6650,6650,6650,6650,43529
chr19:10652267-10654190	chr19	+	10652376	10654156	True	NM_023008,NR_031603,NM_001166215,NM_032885	chr19,chr19,chr19,chr19	-,+,-,+	KRI1,MIR1238,S1PR5,ATG4D	22600,8641,-23708,490
chr15:36940333-36941946	chr15	+	36940355	36941846	True	NR_027320,NM_032499	chr15,chr15	-,+	CSNK1A1P1,C15orf41	168912,-7613
chr9:100687337-100688527	chr9	+	100687634	100688525	True	NM_016481,NM_006401	chr9,chr9	-,+	C9orf156,ANP32B	-2782,56963
chr16:85336774-85337120	chr16	+	85336779	85337033	True	NR_033984,NM_198491	chr16,chr16	+,-	LOC400548,FAM92B	-166074,-190665
chr16:56224272-56224502	chr16	+	56224398	56224465	True	NM_020988,NR_026889,NR_027078,NM_138736	chr16,chr16,chr16,chr16	+,-,-,+	GNAO1,DKFZP434H168,LOC283856,GNAO1	785,4023,592,785
chr12:4136113-4137558	chr12	+	4136157	4137581	True	NM_001759,NM_020367	chr12,chr12	+,-	CCND2,PARP11	245320,-153549
chr19:56743503-56745281	chr19	+	56743901	56745241	True	NM_024303,NM_033106	chr19,chr19	-,+	ZSCAN5A,GALP	-4242,-56563
chr17:7386662-7387043	chr17	+	7386770	7387054	True	NM_000937,NM_020899,NM_001128833,NM_001102614	chr17,chr17,chr17,chr17	+,-,-,+	POLR2A,ZBTB4,ZBTB4,AMAC1L3	643,564,-3826,-2100
chr2:242211157-242211634	chr2	+	242211156	242211522	True	NM_203346,NM_001008491	chr2,chr2	-,+	HDLBP,SEPT2	830,43200
chr12:492471-493479	chr12	+	492715	493326	True	NM_001042603,NM_001130147,NM_001130148	chr12,chr12,chr12	-,+,+	KDM5A,CCDC77,CCDC77	5353,5189,5189
chr12:5290008-5290429	chr12	+	5290012	5290173	True	NM_006422,NM_002234	chr12,chr12	-,+	AKAP3,KCNA5	-535669,-136978
chr16:69142408-69143301	chr16	+	69142444	69143228	True	NM_138612,NM_001199280,NM_005329,NM_001040146	chr16,chr16,chr16,chr16	+,+,+,-	HAS3,HAS3,HAS3,CHTF8	-2366,-3028,-1052,22884
chr11:67399275-67399843	chr11	+	67399370	67399834	True	NM_007103,NM_181843,NM_005995	chr11,chr11,chr11	+,-,-	NDUFV1,NUDT8,TBX10	-25098,-1969,7247
chr9:100821598-100822038	chr9	+	100821608	100822083	True	NM_018946,NM_014788	chr9,chr9	+,-	NANS,TRIM14	-2707,59455
chr22:37445955-37446847	chr22	+	37446432	37446834	True	NM_024681,NM_003312	chr22,chr22	+,-	KCTD17,TST	944,-30941
chr15:51621777-51622304	chr15	+	51621836	51622134	True	NM_000103,NM_031226,NM_181789	chr15,chr15,chr15	-,-,+	CYP19A1,CYP19A1,GLDN	8711,8711,11578
chr19:48674519-48674929	chr19	+	48674597	48674855	True	NM_000234,NM_153608	chr19,chr19	-,+	LIG1,ZNF114	-1037,99798
chrX:72162827-72163052	chrX	+	72162865	72163073	True	NR_034116,NR_026594,NR_026595	chrX,chrX,chrX	+,-,-	LOC100129407,NCRNA00246B,NCRNA00246	-4913,566,566
chrX:72162827-72163052	chrX	-	71997412	71997620	False	NR_034116,NM_001080851	chrX,chrX	-,+	LOC100129407,DMRTC1B	4914,67255
chr19:40439578-40441330	chr19	+	40439807	40441295	True	NM_003890,NM_006503	chr19,chr19	-,+	FCGBP,PSMC4	-4,35777
chr19:1102145-1102440	chr19	+	1102150	1102238	True	NM_001039847,NM_002085,NM_002695,NM_001039848	chr19,chr19,chr19,chr19	+,+,-,+	GPX4,GPX4,POLR2E,GPX4	1697,1697,-6759,2410
chr10:106035144-106037132	chr10	+	106035259	106036890	True	NM_001191013,NM_183239,NM_001191015,NM_001191014,NM_025145	chr10,chr10,chr10,chr10,chr10	+,+,+,+,-	GSTO2,GSTO2,GSTO2,GSTO2,WDR96	-6679,-6679,-423,-423,-43139
chr4:87250837-87251169	chr4	+	87250856	87251184	True	NM_006264,NM_138980	chr4,chr4	+,-	PTPN13,MAPK10	264283,30241
chr7:99696777-99697948	chr7	+	99696872	99697914	True	NM_005916,NR_029831,NR_029498,NM_182776,NR_029510,NM_004722	chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,+	MCM7,MIR106B,MIR25,MCM7,MIR93,AP4M1	1563,-5175,-5606,516,-5402,1215
chr13:32419951-32420655	chr13	+	32420045	32420500	True	NR_027062,NM_001136571	chr13,chr13	+,-	EEF1DP3,ZAR1L	419,465641
chr12:50364070-50364950	chr12	+	50364086	50364890	True	NM_001126103,NM_001651,NM_001652	chr12,chr12,chr12	-,+,+	RACGAP1,AQP5,AQP6	54467,-8858,1729
chr10:77544379-77545633	chr10	+	77544745	77545676	True	NM_032772,NM_032024	chr10,chr10	-,+	ZNF503,C10orf11	-383232,-2277
chrX:28628575-28630509	chrX	+	28628577	28630357	True	NM_014271,NM_001017930	chrX,chrX	+,-	IL1RAPL1,DCAF8L1	-22948,-629011
chr8:87756526-87758358	chr8	+	87756706	87758387	True	NM_019098,NM_173538	chr8,chr8	-,+	CNGB3,CNBD1	-803,120288
chr19:10443206-10443493	chr19	+	10443228	10443538	True	NM_002162,NM_133452,NM_003259	chr19,chr19,chr19	-,-,+	ICAM3,RAVER1,ICAM5	6857,826,-42624
chr16:57127928-57129430	chr16	+	57127955	57129363	True	NM_152727,NM_024946	chr16,chr16	+,-	CPNE2,FAM192A	-1551,90663
chr4:124707862-124709216	chr4	+	124708022	124709168	True	NM_198041,NR_027106	chr4,chr4	-,+	NUDT6,LOC285419	-863899,-12662
chr19:52520808-52521660	chr19	+	52521145	52521677	True	NM_198480,NM_025040,NM_001199324,NM_024840	chr19,chr19,chr19,chr19	-,-,-,+	ZNF615,ZNF614,ZNF615,ZNF613	-9662,10053,-9662,-90520
chr11:537061-537430	chr11	+	537065	537479	True	NM_176795,NM_001130442,NM_005343,NM_198075	chr11,chr11,chr11,chr11	-,-,-,+	HRAS,HRAS,HRAS,LRRC56	-1515,-1515,-1515,42
chr16:50720117-50720353	chr16	+	50720302	50720402	True	NM_153337,NM_022162,NM_182854,NM_001144972	chr16,chr16,chr16,chr16	-,+,-,-	SNX20,NOD2,SNX20,SNX20	-5038,10647,-5038,-5038
chrX:51928247-51928499	chrX	+	51928267	51928439	True	NM_001098800,NM_177537,NM_177535,NR_003712,NM_030801,NR_003711	chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,-,+,+	MAGED4,MAGED4B,MAGED4B,SNORA11E,MAGED4B,SNORA11D	-310,-399,-399,5455,-399,5278
chrX:51928247-51928499	chrX	-	51811847	51812019	False	NM_001098800,NM_177537,NM_177535,NR_003712,NM_030801,NR_003711	chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,+,-,-	MAGED4,MAGED4B,MAGED4B,SNORA11E,MAGED4B,SNORA11D	310,399,399,-5455,399,-5278
chr10:85999895-86001061	chr10	+	86000045	86000897	True	NM_001012720,NM_001012722,NM_002921,NM_015613	chr10,chr10,chr10,chr10	+,+,+,-	RGR,RGR,RGR,LRIT1	3911,3911,3911,370
chr1:78956896-78957226	chr1	+	78956931	78957181	True	NM_001039585,NM_000959,NM_003902	chr1,chr1,chr1	+,+,-	PTGFR,PTGFR,FUBP1	-254,-254,-512154
chr11:71500941-71501352	chr11	+	71500998	71501089	True	NM_018172,NM_152563,NR_029192,NM_001099653	chr11,chr11,chr11,chr11	+,+,-,+	FAM86C,FAM86C,LOC100133315,FAM86C	-2492,-2492,138455,-2492
chr16:84540869-84541107	chr16	+	84540943	84541155	True	NM_014861,NM_020947	chr16,chr16	+,-	ATP2C2,KIAA1609	-138861,-2655
chr11:122850451-122850739	chr11	+	122850470	122850698	True	NR_027288,NM_001098169	chr11,chr11	+,-	LOC341056,BSX	37575,1731
chr12:8818945-8819233	chr12	+	8819033	8819116	True	NM_003480,NM_020734	chr12,chr12	-,+	MFAP5,RIMKLB	-3600,31401
chr12:97040716-97041387	chr12	+	97041278	97041411	True	NM_002595,NM_001135176	chr12,chr12	-,+	CDK17,NEDD1	-246912,259589
chr8:23312969-23313400	chr8	+	23312971	23313433	True	NM_016612,NM_001128930,NM_004901	chr8,chr8,chr8	+,-,-	SLC25A37,ENTPD4,ENTPD4	72929,1861,1753
chr3:56502812-56503848	chr3	+	56502934	56503520	True	NM_015576,NM_001012506	chr3,chr3	-,+	ERC2,CCDC66	-543,87663
chr20:41819880-41820377	chr20	+	41819905	41820311	True	NM_133170,NM_007050,NM_006275	chr20,chr20,chr20	-,-,+	PTPRT,PTPRT,SRSF6	-1348,-1348,266192
chr3:37904634-37905089	chr3	+	37904679	37905027	True	NM_005808,NM_001008392,NM_001130964	chr3,chr3,chr3	+,+,-	CTDSPL,CTDSPL,PLCD1	-1061,-1061,161301
chr6:143999407-144000697	chr6	+	143999600	144000746	True	NM_001100165,NM_001100164,NR_027113	chr6,chr6,chr6	+,+,-	PHACTR2,PHACTR2,LOC285740	-552,-552,-109124
chr14:20929686-20929994	chr14	+	20929690	20930038	True	NM_001641,NM_000270,NM_017807,NM_001100814,NM_080649,NM_080648,NM_144568	chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,+,-,-,+,+,-	APEX1,PNP,OSGEP,TMEM55B,APEX1,APEX1,TMEM55B	-6451,7499,-6423,-53,-6451,-6451,-53
chr1:145415831-145417130	chr1	+	145415847	145417142	True	NM_213652,NM_145277,NM_032305,NM_213653,NM_202004	chr1,chr1,chr1,chr1,chr1	+,+,-,+,+	HFE2,HFE2,POLR3GL,HFE2,HFE2	-2707,-2707,53296,-2707,-2707
chr12:120882909-120883459	chr12	+	120883239	120883493	True	NM_016399,NM_176818,NM_004373,NR_033684	chr12,chr12,chr12,chr12	-,+,+,+	TRIAP1,GATC,COX6A1,GATC	773,747,-7387,747
chr15:45718235-45719463	chr15	+	45718899	45719283	True	NM_001482,NM_197955,NR_030599,NM_032413	chr15,chr15,chr15,chr15	-,+,+,+	GATM,C15orf48,MIR147B,C15orf48	-47919,3479,5964,3479
chr17:55922724-55923553	chr17	+	55922781	55923360	True	NM_016070,NM_080677	chr17,chr17	-,+	MRPS23,DYNLL2	4130,237419
chr7:22859080-22860885	chr7	+	22859258	22860693	True	NR_003075,NM_019059	chr7,chr7	+,-	SNORD93,TOMM7	35538,1789
chr17:73148821-73149524	chr17	+	73148909	73149392	True	NM_016185,NM_001002032,NM_001002033,NM_024585	chr17,chr17,chr17,chr17	-,-,-,+	HN1,HN1,HN1,ARMC7	1433,1432,1432,-42878
chr16:71390770-71392000	chr16	+	71391176	71391840	True	NM_007088,NR_027910,NM_018348,NM_001740	chr16,chr16,chr16,chr16	+,+,-,+	CALB2,CALB2,FTSJD1,CALB2	775,775,-67667,775
chr7:56357494-56359318	chr7	+	56357591	56359159	True	NR_029420,NR_026929	chr7,chr7	-,+	LOC650226,DKFZp434L192	156959,204756
chr6:46292470-46293416	chr6	+	46292471	46293451	True	NM_005822,NM_014936	chr6,chr6	-,+	RCAN2,ENPP4	130,-194830
chr19:55573904-55574164	chr19	+	55574086	55574198	True	NR_027382,NM_001145971,NR_027381,NM_138412,NM_133180	chr19,chr19,chr19,chr19,chr19	-,-,-,-,+	RDH13,RDH13,RDH13,RDH13,EPS8L1	437,437,437,6766,13022
chr15:45125496-45126990	chr15	+	45125938	45126351	True	NM_182985,NM_001145112	chr15,chr15	+,-	TRIM69,PATL2	-97429,-156852
chr15:45125496-45126990	chr15	-	45358644	45359045	False	NR_034039,NM_014080	chr15,chr15	+,-	SORD,DUOX2	-43400,47364
chr7:72637206-72637515	chr7	+	72637315	72637535	True	NR_002164,NR_003186	chr7,chr7	-,+	GTF2IRD2P1,NCF1B	48173,-2692
chr7:72637206-72637515	chr7	+	74191015	74191235	False	NM_173537,NM_000265	chr7,chr7	-,+	GTF2IRD2,NCF1	76656,-2757
chr7:72637206-72637515	chr7	-	74584893	74585113	False	NM_001003795,NR_003187	chr7,chr7	+,-	GTF2IRD2B,NCF1C	-76597,2753
chr3:10290561-10290804	chr3	+	10290564	10290727	True	NM_001134941,NM_014760	chr3,chr3	-,+	GHRL,TATDN2	41743,-438
chr5:156569896-156570488	chr5	+	156569914	156570396	True	NM_004270,NM_001100816,NM_005546	chr5,chr5,chr5	-,-,+	MED7,MED7,ITK	7,-128,37510
chr5:1226003-1226566	chr5	+	1226067	1226513	True	NM_182632,NM_001193376	chr5,chr5	+,-	SLC6A18,TERT	-648,68699
chr2:211341454-211342259	chr2	+	211341581	211342298	True	NM_001136575,NM_001136574,NM_006055,NM_001122633	chr2,chr2,chr2,chr2	-,-,-,+	LANCL1,LANCL1,LANCL1,CPS1	-82,-152,-90,107
chr2:203094855-203095357	chr2	+	203094934	203095271	True	NM_003352,NM_001005782,NM_001005781,NM_015934	chr2,chr2,chr2,chr2	-,-,-,+	SUMO1,SUMO1,SUMO1,NOP58	8109,8109,8109,35243
chr14:98623016-98624342	chr14	+	98623092	98623859	True	NR_015430,NM_182560	chr14,chr14	-,+	C14orf64,C14orf177	-178631,554090
chr3:180367080-180368721	chr3	+	180367085	180368731	True	NM_133462,NM_181426	chr3,chr3	+,-	TTC14,CCDC39	-47230,28602
chr19:55694094-55694626	chr19	+	55694098	55694162	True	NM_032430,NM_003180	chr19,chr19	+,-	BRSK1,SYT5	101371,-2378
chr1:23889050-23889866	chr1	+	23889093	23889664	True	NM_002167,NR_027042	chr1,chr1	-,+	ID3,MDS2	-2771,64159
chr20:35199116-35200151	chr20	+	35199121	35200166	True	NM_021809,NM_001199535,NM_001199513,NM_001199514,NM_001199515,NM_032214	chr20,chr20,chr20,chr20,chr20,chr20	+,+,+,+,+,-	TGIF2,TGIF2-C20ORF24,TGIF2,TGIF2,TGIF2,SLA2	1843,2790,1709,1709,2790,74442
chr9:115910340-115910749	chr9	+	115910595	115910771	True	NM_001860,NR_024376	chr9,chr9	+,-	SLC31A2,NCRNA00256B	2466,-36638
chrX:113282438-113283329	chrX	+	113282774	113283272	True	NM_000868,NM_000640	chrX,chrX	+,-	HTR2C,IL13RA2	535278,968993
chr2:208571826-208573515	chr2	+	208571899	208573316	True	NM_001142300,NM_152523,NM_003468	chr2,chr2,chr2	+,+,-	CCNYL1,CCNYL1,FZD5	2947,2947,60879
chr9:46280645-46281067	chr4	-	3536659	3537033	False	NM_002337,NM_173660	chr4,chr4	-,+	LRPAP1,DOK7	-2435,-71677
chr9:46280645-46281067	chr9	+	46280685	46281059	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2649955,406506
chr9:46280645-46281067	chr9	+	67689659	67689897	False	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	104342,236863
chr9:46280645-46281067	chr9	-	45102278	45102541	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-112094,-1471548
chr9:46280645-46281067	chr9	+	44768528	44768766	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	221469,-1137798
chr13:37573112-37573338	chr13	+	37573142	37573237	True	NM_001142364,NM_013338,NM_181503	chr13,chr13,chr13	-,-,+	ALG5,ALG5,EXOSC8	317,317,1440
chr22:21987447-21987840	chr22	+	21987486	21987882	True	NM_152612,NM_001017964,NM_022044	chr22,chr22,chr22	+,-,+	CCDC116,YDJC,SDF2L1	-451,-3146,8659
chr20:48600599-48600874	chr20	+	48600702	48600892	True	NM_006038,NM_005985	chr20,chr20	-,+	SPATA2,SNAI1	-68622,-1240
chr1:229407628-229409368	chr1	+	229407708	229409066	True	NM_145257,NM_004578	chr1,chr1	-,+	C1orf96,RAB4A	69685,-881
chr18:11637271-11638080	chr18	+	11637270	11637594	True	NM_023075,NM_182978	chr18,chr18	-,+	MPPE1,GNAL	271097,51541
chr14:35762030-35763341	chr14	+	35762071	35763151	True	NM_002791,NM_020529	chr14,chr14	+,-	PSMA6,NFKBIA	-553,110867
chr19:42761586-42761849	chr19	+	42761678	42761766	True	NM_006494,NM_015125	chr19,chr19	-,+	ERF,CIC	-2369,27050
chr19:2096933-2097168	chr19	+	2096989	2097147	True	NM_001031735,NM_001039846,NM_130807	chr19,chr19,chr19	+,+,-	IZUMO4,IZUMO4,MOBKL2A	-172,-172,-720
chr6:80336798-80337038	chr6	+	80336829	80337040	True	NM_031469,NM_181714	chr6,chr6	+,-	SH3BGRL2,LCA5	3959,-89682
chrX:11775355-11775595	chrX	+	11775356	11775587	True	NM_078628,NM_078629,NM_001193270,NM_006125,NM_006800	chrX,chrX,chrX,chrX,chrX	+,+,+,-,+	MSL3,MSL3,MSL3,ARHGAP6,MSL3	690,690,1121,-91535,2147
chr8:75917051-75918073	chr8	+	75917300	75918118	True	NM_031461,NM_020647	chr8,chr8	+,-	CRISPLD1,JPH1	-20648,-683738
chr17:25315647-25317042	chr17	+	25316222	25316994	True	NM_015626,NM_000625	chr17,chr17	+,-	WSB1,NOS2	304111,810611
chr16:67193331-67193644	chr16	+	67193506	67193688	True	NM_003789,NM_001040667,NM_033309,NM_018378,NM_001538	chr16,chr16,chr16,chr16,chr16	-,+,-,+,+	TRADD,HSF4,B3GNT9,FBXL8,HSF4	174,3599,-8604,202,3599
chr5:179720373-179721566	chr5	+	179720409	179721575	True	NM_001135044,NM_139068,NM_139069,NM_015455,NM_139070,NM_002752	chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,+,-,-	MAPK9,MAPK9,MAPK9,CNOT6,MAPK9,MAPK9	-1338,-1338,-1338,199841,-1338,-1338
chr15:25223918-25225686	chr15	+	25224015	25225561	True	NR_022008,NR_022011,NM_130838,NR_001292,NR_001293,NR_001294	chr15,chr15,chr15,chr15,chr15,chr15	+,+,-,+,+,+	PAR5,PAR-SN,UBE3A,SNORD108,SNORD107,SNORD64	4445,1579,425143,6510,1579,4685
chr1:64010375-64011296	chr1	+	64010375	64011089	True	NR_002771,NM_014288	chr1,chr1	+,-	DLEU2L,ITGB3BP	3561,-21540
chr11:914442-915025	chr11	+	914547	915040	True	NM_012305,NM_001142675,NM_001142674,NM_001142677,NM_001142676,NM_023947	chr11,chr11,chr11,chr11,chr11,chr11	+,-,-,-,-,-	AP2A2,CHID1,CHID1,CHID1,CHID1,CHID1	10800,68,-3673,-3673,-3673,-3673
chr1:162379973-162380537	chr1	+	162379982	162380424	True	NM_001085375,NM_053282	chr1,chr1	+,-	C1orf226,SH2D1B	-28513,1554
chr4:153599670-153600940	chr4	+	153599797	153600849	True	NM_152680,NM_001025593	chr4,chr4	-,+	TMEM154,ARFIP1	518,100262
chr17:8195599-8196929	chr17	+	8195825	8196788	True	NM_016492,NM_001177802,NM_201520,NM_001177801	chr17,chr17,chr17,chr17	+,+,-,+	RANGRF,RANGRF,SLC25A35,RANGRF	-3907,-3907,1433,-3907
chr22:42081826-42082597	chr22	+	42082104	42082639	True	NM_001003796,NM_005008,NM_001142964	chr22,chr22,chr22	-,-,+	NHP2L1,NHP2L1,C22orf46	2330,-3548,3907
chr9:140063940-140064193	chr9	+	140063941	140064165	True	NM_001013653,NR_037416,NM_003731	chr9,chr9,chr9	-,-,+	LRRC26,MIR3621,SSNA1	376,-219,18888
chr15:83946220-83946834	chr15	+	83946398	83946873	True	NM_003027,NM_001717	chr15,chr15	+,-	SH3GL3,BNC1	169217,6645
chr4:39462076-39463473	chr4	+	39462416	39463317	True	NM_001024921,NM_194451,NM_000661,NM_006859	chr4,chr4,chr4,chr4	-,+,-,+	RPL9,LIAS,RPL9,LIAS	-2209,-1802,-1848,-1802
chr6:14932546-14932860	chr6	+	14932713	14932897	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	313629,730442
chr14:35513487-35513947	chr14	+	35513616	35513822	True	NM_001079519,NM_017917,NM_173607	chr14,chr14,chr14	+,-,+	FAM177A1,PPP2R3C,FAM177A1	290,77755,1787
chr14:105071678-105072508	chr14	+	105071764	105072537	True	NM_207379,NM_001008404	chr14,chr14	-,+	TMEM179,C14orf180	-667,-25759
chr1:10061282-10061977	chr1	+	10061310	10061853	True	NM_032368,NM_052960	chr1,chr1	-,+	LZIC,RBP7	-58484,-4106
chrY:143017-143309	chrY	+	143024	143342	True	NR_028057,NM_018390,NM_012227	chrY,chrY,chrY	+,+,-	PLCXD1,PLCXD1,GTPBP6	-84,4718,37595
chrY:143017-143309	chrX	+	193024	193342	False	NR_028057,NM_018390,NM_012227	chrX,chrX,chrX	+,+,-	PLCXD1,PLCXD1,GTPBP6	-84,4718,37595
chr14:55521154-55521397	chr14	+	55521366	55521449	True	NM_007086,NM_144578	chr14,chr14	-,+	WDHD1,MAPK1IP1L	-27547,-3058
chr7:25159998-25160883	chr7	+	25160025	25160834	True	NM_018947,NM_016447	chr7,chr7	-,+	CYCS,MPP6	4196,-546997
chr14:30374476-30376414	chr14	+	30374545	30375920	True	NM_017769,NM_002742	chr14,chr14	+,-	G2E3,PRKD1	652408,21036
chr13:60521297-60521790	chr13	+	60521297	60521739	True	NM_030932,NM_001146071	chr13,chr13	-,+	DIAPH3,TDRD3	65664,448851
chr13:76208801-76209393	chr13	+	76209265	76209435	True	NM_005358,NM_203497	chr13,chr13	+,-	LMO7,COMMD6	-14757,-97274
chr15:66651413-66651841	chr15	+	66651528	66651640	True	NM_017858,NM_002755	chr15,chr15	-,+	TIPIN,MAP2K1	-2474,27570
chr20:1629905-1631291	chr20	+	1629986	1631273	True	NM_018556,NM_080816,NM_001039508,NM_001040022	chr20,chr20,chr20,chr20	-,-,-,+	SIRPG,SIRPG,SIRPG,SIRPA	7212,7212,7212,243539
chrX:70713552-70714127	chrX	+	70713825	70713939	True	NR_002226,NM_181672	chrX,chrX	-,+	INGX,OGT	-1221,38972
chr5:56248569-56249053	chr5	+	56248583	56249082	True	NM_001171990,NM_152622	chr5,chr5	+,-	C5orf35,MIER3	-43547,-629
chr16:15146545-15147506	chr16	+	15146716	15147296	True	NM_015027,NM_173474	chr16,chr16	+,-	PDXDC1,NTAN1	-77934,2595
chr10:88426500-88428115	chr10	+	88426828	88428036	True	NM_001080115,NM_001080114,NM_001080116,NM_001171611,NM_001171610,NM_007078,NM_015045	chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,+,-	LDB3,LDB3,LDB3,LDB3,LDB3,LDB3,WAPAL	389,389,284,389,169,389,-145287
chr10:79789651-79790352	chr10	+	79789698	79790151	True	NM_001026,NM_007055,NM_001142282,NM_001142283,NM_001142284,NM_033022,NM_001142285	chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,-,+,+,+,+,+	RPS24,POLR3A,RPS24,RPS24,RPS24,RPS24,RPS24	3366,-400,3366,3366,3366,3366,3366
chr1:20960438-20961848	chr1	+	20960548	20961652	True	NM_005216,NM_032409	chr1,chr1	-,+	DDOST,PINK1	26435,-658
chr2:58481061-58481514	chr2	+	58481060	58481560	True	NM_001130481,NM_018062	chr2,chr2	+,-	VRK2,FANCL	-207274,-12545
chrX:129118721-129118972	chrX	+	129118758	129119018	True	NM_021946,NM_001421	chrX,chrX	+,-	BCORL1,ELF4	20145,125507
chr9:94187179-94187816	chr9	+	94187210	94187754	True	NR_037472,NM_005384	chr9,chr9	+,-	MIR3910-1,NFIL3	210778,-1066
chr5:125770368-125771196	chr5	+	125770552	125771026	True	NM_023927,NM_001182	chr5,chr5	+,-	GRAMD3,ALDH7A1	-11734,160106
chr2:229040867-229041441	chr2	+	229040960	229041314	True	NM_178821,NM_001142644,NM_030623	chr2,chr2,chr2	+,-,-	WDR69,SPHKAP,SPHKAP	-304684,5097,5097
chr3:132757971-132758311	chr3	+	132757970	132758306	True	NM_153240,NM_023943,NM_001136469	chr3,chr3,chr3	-,+,+	NPHP3,TMEM108,TMEM108	-316667,-857,-857
chr14:19412639-19412968	chr22	-	16414498	16414651	False	NM_001005239,NR_001591	chr22,chr22	-,+	OR11H1,psiTPTE22	35203,668149
chr14:19412639-19412968	chr16	-	84778902	84778953	False	NM_005153,NM_021149	chr16,chr16	+,-	USP10,COTL1	-45399,-127233
chr14:19412639-19412968	chr14	+	19412658	19412893	True	NM_001145442,NM_001013354	chr14,chr14	-,+	POTEM,OR11H12	607430,-35115
chr14:19412639-19412968	chr14	-	20146819	20147036	False	NM_001197287,NM_172194	chr14,chr14	-,+	OR11H2,OR4Q3	35505,68550
chr17:618965-619235	chr17	+	618965	619175	True	NM_018289,NM_024792,NM_001128159	chr17,chr17,chr17	-,+,-	VPS53,FAM57A,VPS53	-869,16671,-869
chr19:37105164-37105735	chr19	+	37105353	37105558	True	NM_001145649,NM_032825,NM_001145650,NR_027239	chr19,chr19,chr19,chr19	-,+,-,-	ZNF529,ZNF382,ZNF529,ZNF529	-9175,-9197,-9175,-9175
chr1:1548968-1549253	chr1	+	1549159	1549295	True	NM_001170687,NM_080875,NM_001170689,NM_001170688,NM_001170686,NR_033183,NM_014188	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,+,-	MIB2,MIB2,MIB2,MIB2,MIB2,MIB2,SSU72	1499,1499,1949,1499,1499,1499,-38897
chr1:23859464-23860669	chr1	+	23859484	23860640	True	NM_004091,NR_027042	chr1,chr1	-,+	E2F2,MDS2	-1772,93183
chr7:100494317-100494547	chr7	+	100494325	100494543	True	NM_000665,NM_015908,NM_015831,NM_001015072	chr7,chr7,chr7,chr7	-,+,-,-	ACHE,SRRT,ACHE,UFSP1	-784,-21675,-784,-6986
chr21:31131595-31132438	chr21	+	31131859	31132453	True	NM_175611,NR_027021	chr21,chr21	-,+	GRIK1,GRIK1-AS1	179883,-11435
chr6:26596965-26597380	chr6	+	26596969	26597351	True	NM_013375,NM_024639	chr6,chr6	+,-	ABT1,ZNF322A	-2,62662
chr4:57686862-57687215	chr4	+	57686925	57687193	True	NM_021114,NM_005612	chr4,chr4	-,+	SPINK2,REST	750,86848
chr12:51566155-51566582	chr12	+	51566225	51566405	True	NM_005653,NM_001136264,NM_001173453,NM_001173452	chr12,chr12,chr12,chr12	-,+,-,-	TFCP2,DAZAP2,TFCP2,TFCP2	571,66102,571,571
chr1:3817882-3818540	chr1	+	3817968	3818134	True	NR_024455,NM_207356	chr1,chr1	+,-	LOC100133612,C1orf174	-1051,-1111
chr1:246887955-246889068	chr1	+	246888048	246889100	True	NM_022366,NM_016002	chr1,chr1	-,+	TFB2M,SCCPDH	-158483,-725
chr10:51244606-51245322	chr10	+	51245213	51245289	True	NM_001077686,NM_002443	chr10,chr10	-,+	AGAP8,MSMB	1298,304263
chr1:4039691-4040086	chr1	+	4039697	4040127	True	NR_024455,NM_207356	chr1,chr1	+,-	LOC100133612,C1orf174	-222780,-222840
chr9:6328338-6329091	chr9	+	6328366	6328868	True	NM_001001875,NM_001001874,NR_024095,NM_033516	chr9,chr9,chr9,chr9	+,+,-,+	TPD52L3,TPD52L3,RANBP6,TPD52L3	-68,-68,-312726,-68
chr17:54991721-54991948	chr17	+	54991732	54991995	True	NM_021626,NM_005082	chr17,chr17	+,-	SCPEP1,TRIM25	63472,-323
chr17:15393555-15394230	chr17	+	15393572	15394260	True	NM_001204477,NM_001130842	chr17,chr17	-,+	CDRT4,ZNF286A	-22647,208630
chr17:29152966-29154010	chr17	+	29152965	29153827	True	NM_015986,NM_024857	chr17,chr17	-,+	CRLF3,ATAD5	-1187,5195
chr5:114514402-114514824	chr5	+	114514476	114514752	True	NM_001284,NM_001017398,NM_001017397,NM_018700	chr5,chr5,chr5,chr5	+,-,-,-	AP3S1,TRIM36,TRIM36,TRIM36	662866,1541,1541,1541
chr12:109536514-109537721	chr12	+	109536605	109537594	True	NM_001205179,NM_080911,NM_001205180,NM_001145375,NM_001145374,NM_003362,NM_001001655,NR_026930,NR_026931	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,+,-,-,-,+,-,-,-	ALKBH2,UNG,ALKBH2,ALKBH2,ALKBH2,UNG,ALKBH2,ALKBH2,ALKBH2	-5312,-1268,-5312,-5312,-5312,-744,-5312,-5312,-5312
chr17:76249493-76249805	chr17	+	76249549	76249689	True	NR_002219,NM_001204210	chr17,chr17	-,+	EPR1,TMEM235	-28766,-22209
chr3:98619845-98620113	chr3	+	98619844	98620044	True	NM_006100,NM_080927	chr3,chr3	+,-	ST3GAL6,DCBLD2	-168323,539
chr3:49314007-49314215	chr3	+	49314014	49314264	True	NM_198562,NR_036233	chr3,chr3	-,+	C3orf62,MIR4271	294,-2512
chr1:198163304-198164723	chr1	+	198163702	198164576	True	NM_133494,NM_133262	chr1,chr1	+,-	NEK7,ATP6V1G3	-37645,345558
chr19:55659940-55660311	chr19	+	55660054	55660244	True	NM_017729,NM_001126132,NM_001126133,NM_000363,NM_003283	chr19,chr19,chr19,chr19,chr19	+,-,-,-,-	EPS8L1,TNNT1,TNNT1,TNNI3,TNNT1	-68353,412,412,8906,412
chr7:102561400-102561846	chr7	+	102561592	102561857	True	NM_001031692,NM_145032,NM_005824	chr7,chr7,chr7	+,-,+	LRRC17,FBXL13,LRRC17	-8308,153213,-8308
chr2:65590833-65591418	chr2	+	65590844	65591442	True	NM_005722,NM_001128210	chr2,chr2	+,-	ACTR2,SPRED2	-136067,2539
chr14:50099935-50100326	chr14	+	50099989	50100309	True	NM_002408,NM_018139,NM_001083908	chr14,chr14,chr14	+,-,-	MGAT2,C14orf104,C14orf104	-12556,1689,1689
chr19:2781783-2783070	chr19	+	2782342	2782958	True	NM_003249,NM_003021	chr19,chr19	+,-	THOP1,SGTA	2547,446
chr4:37895768-37897179	chr4	+	37895899	37897064	True	NM_001085400,NM_015173	chr4,chr4	-,+	RELL1,TBC1D1	-207900,-3236
chr17:48278213-48278508	chr17	+	48278349	48278439	True	NM_001135697,NM_000088	chr17,chr17	+,-	SGCA,COL1A1	-35034,611
chr11:7047505-7049289	chr11	+	7048284	7049303	True	NM_013249,NM_176822	chr11,chr11	-,+	ZNF214,NLRP14	-6698,-6643
chr1:209757319-209757964	chr1	+	209757556	209757969	True	NM_020439,NR_036213	chr1,chr1	+,-	CAMK1G,MIR4260	-562,38936
chr17:8926247-8926538	chr17	+	8926266	8926532	True	NM_004822,NM_001142633	chr17,chr17	+,-	NTN1,PIK3R5	-1458,-57242
chr8:144947323-144947555	chr8	+	144947332	144947592	True	NM_000837,NM_031308	chr8,chr8	+,-	GRINA,EPPK1	116633,16
chr1:158982473-158983184	chr1	+	158982504	158983213	True	NM_004833,NM_005531	chr1,chr1	-,+	AIM2,IFI16	63484,-2873
chr1:143916626-143916915	chr1	+	143916635	143916945	True	NM_207418,NR_034178	chr1,chr1	-,+	FAM72D,SRGAP2P2	-3492,-944
chr1:143916626-143916915	chr1	-	120835222	120835482	False	NM_001004340,NM_001100910	chr1,chr1	-,+	FCGR1B,FAM72B	100518,3522
chr1:143916626-143916915	chr1	-	206134654	206134964	False	NM_001123168,NM_001007544	chr1,chr1	+,-	FAM72A,C1orf186	3946,153739
chr6:33304462-33305588	chr6_qbl_hap6	+	4536740	4537074	False	NM_001350,NM_001185181	chr6_qbl_hap6,chr6_qbl_hap6	-,+	DAXX,PFDN6	-13698,-47152
chr6:33304462-33305588	chr6_mcf_hap5	+	4778238	4778572	False	NM_001350,NM_001185181	chr6_mcf_hap5,chr6_mcf_hap5	-,+	DAXX,PFDN6	-13703,-47149
chr6:33304462-33305588	chr6_cox_hap2	+	4748309	4748643	False	NM_001350,NM_001185181	chr6_cox_hap2,chr6_cox_hap2	-,+	DAXX,PFDN6	-13698,-47150
chr6:33304462-33305588	chr6	+	33304492	33304826	True	NR_024517,NM_001185181	chr6,chr6	-,+	DAXX,PFDN6	-13699,-47147
chr6:33304462-33305588	chr6_dbb_hap3	+	4585817	4586151	False	NM_001350,NM_001185181	chr6_dbb_hap3,chr6_dbb_hap3	-,+	DAXX,PFDN6	-13697,-47146
chr17:80292758-80292991	chr17	+	80292905	80293039	True	NM_003004,NM_207459	chr17,chr17	-,+	SECTM1,TEX19	-984,24083
chr11:13983782-13984003	chr11	+	13983782	13983938	True	NM_006108,NM_001177315	chr11,chr11	+,-	SPON1,RRAS2	-1,396143
chr20:43374882-43375706	chr20	+	43374924	43375624	True	NM_182970,NM_022358	chr20,chr20	-,+	RIMS4,KCNK15	63338,-487
chr17:41363805-41364133	chr17	+	41363877	41364134	True	NM_007300,NM_145041	chr17,chr17	-,+	BRCA1,TMEM106A	-86377,-34
chr17:36826361-36827029	chr17	+	36826413	36826919	True	NM_005937,NM_001130677	chr17,chr17	+,-	MLLT6,C17orf96	34953,4318
chr3:195937945-195938376	chr3	+	195937996	195938404	True	NM_001039617,NM_152672	chr3,chr3	-,+	ZDHHC19,OSTalpha	-54,4978
chr10:48254902-48255251	chr10	+	48254934	48255182	True	NM_001137549,NM_001137548,NM_001137556,NM_001098845,NM_001040084,NM_002900	chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,-	FAM25G,FAM25C,FAM25B,ANXA8L1,ANXA8,RBP3	-7325,-7325,-7325,124,42,135859
chr10:48254902-48255251	chr10	+	47746803	47746865	False	NR_024495,NM_001630	chr10,chr10	-,+	LOC642826,ANXA8L2	-503309,54
chr10:48254902-48255251	chr10	-	47174164	47174412	False	NM_001137549,NM_001137548,NM_005972,NM_001137556,NM_001098845,NM_001040084	chr10,chr10,chr10,chr10,chr10,chr10	-,-,+,-,-,-	FAM25G,FAM25C,PPYR1,FAM25B,ANXA8L1,ANXA8	7328,7328,-90681,7328,-124,-42
chr22:35871764-35872174	chr22	+	35871910	35871980	True	NM_005368,NM_014310	chr22,chr22	-,+	MB,RASD2	141462,65371
chr1:67391183-67391575	chr1	+	67391268	67391614	True	NM_020948,NM_024763,NM_001146110,NM_001146111,NM_001146112,NM_001146113,NM_001077704,NM_207014,NM_001077702,NM_001077703,NM_001077700,NM_001077701	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,-,+,+,+,+,+,-,+,+,+,+	MIER1,WDR78,MIER1,MIER1,MIER1,MIER1,MIER1,WDR78,MIER1,MIER1,MIER1,MIER1	-741,-698,-741,-741,-741,-741,4311,-698,-741,-741,-741,4311
chr4:95700838-95701998	chr4	+	95701306	95701799	True	NM_001203,NM_014485	chr4,chr4	+,-	BMPR1B,HPGDS	-22236,-437279
chr19:37827782-37828397	chr19	+	37827838	37828347	True	NM_181786,NR_029390	chr19,chr19	+,-	HKR1,LOC284412	-2322,-67926
chr4:121804723-121806038	chr4	+	121804919	121805992	True	NM_018699,NR_024365	chr4,chr4	-,+	PRDM5,LOC100192379	38078,879747
chr9:127702134-127702792	chr9	+	127702290	127702806	True	NM_030978,NM_002077	chr9,chr9	+,-	ARPC5L,GOLGA1	-70868,630
chrX:48628220-48628984	chrX	+	48628720	48629004	True	NM_013271,NM_001080489	chrX,chrX	-,+	PCSK1N,GLOD5	65006,-8618
chr11:129685113-129685618	chr11	+	129685113	129685573	True	NM_138788,NM_006165	chr11,chr11	+,-	TMEM45B,NFRKB	167,77381
chr3:111578895-111579578	chr3	+	111579141	111579561	True	NM_024508,NM_145753,NM_001134438,NM_001134439	chr3,chr3,chr3,chr3	-,+,+,+	ZBED2,PHLDB2,PHLDB2,PHLDB2	-264975,-1165,-1165,-624
chr11:66726864-66727453	chr11	+	66726917	66727255	True	NM_000920,NM_001136485,NM_001040716	chr11,chr11,chr11	-,+,-	PC,C11orf86,PC	-1070,15498,-1070
chr11:51513527-51514676	chr11	+	51513715	51514725	True	NM_001004703,NM_001005272	chr11,chr11	+,-	OR4C46,OR4A5	556,-101267
chr1:36236470-36236897	chr1	+	36236628	36236801	True	NM_022111,NM_017629,NM_001190481	chr1,chr1,chr1	-,+,-	CLSPN,EIF2C4,CLSPN	-1077,37026,-1077
chr15:77536164-77537895	chr15	+	77536338	77537525	True	NM_018200,NR_026813	chr15,chr15	+,-	HMG20A,C15orf5	175717,-18592
chr7:74509099-74509347	chr7	+	74509142	74509322	True	NM_030798,NM_001003795	chr7,chr7	-,+	WBSCR16,GTF2IRD2B	-19443,-846
chr7:74509099-74509347	chr7	-	74266929	74267109	False	NM_173537,NR_027775	chr7,chr7	-,+	GTF2IRD2,PMS2P5	782,39784
chr15:74908405-74908644	chr15	+	74908579	74908659	True	NM_001130028,NM_003992,NM_001142443	chr15,chr15,chr15	+,+,-	CLK3,CLK3,EDC3	-1295,-7917,79777
chr19:40789763-40790811	chr19	+	40789803	40790729	True	NM_001031696,NM_001626,NR_030371	chr19,chr19,chr19	+,-,-	PLD3,AKT2,MIR641	63602,586,-1255
chr2:70159600-70160185	chr2	+	70159617	70160011	True	NM_152792,NM_002357	chr2,chr2	-,+	ASPRV1,MXD1	29448,-17495
chr4:170132555-170133306	chr4	+	170132701	170132973	True	NM_001166110,NM_020870	chr4,chr4	+,-	PALLD,SH3RF1	-379603,59326
chr17:26945244-26946436	chr17	+	26945736	26946366	True	NM_001174103,NM_003170	chr17,chr17	-,+	SGK494,SUPT6H	-4525,42935
chr1:75197683-75198990	chr1	+	75198352	75199002	True	NM_001134759,NM_001162916,NM_001130043,NM_001130042,NR_027962,NM_138467,NM_001889	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,+,-,-,+,+,-	CRYZ,TYW3,CRYZ,CRYZ,TYW3,TYW3,CRYZ	140,-27,140,140,-1,-23,140
chr11:3876184-3876387	chr11	+	3876190	3876378	True	NM_001665,NM_003156	chr11,chr11	-,+	RHOG,STIM1	-13977,554
chr2:289614-289919	chr2	+	289666	289808	True	NR_024080,NM_001002919	chr2,chr2	+,-	ACP1,FAM150B	-24851,-1358
chr16:30076683-30077060	chr16	+	30076708	30077058	True	NM_004608,NM_184043,NM_184041,NM_001127617	chr16,chr16,chr16,chr16	-,+,+,+	TBX6,ALDOA,ALDOA,ALDOA	26197,-1159,-15,-786
chr15:99056819-99057955	chr15	+	99056848	99057974	True	NM_182562,NM_000875	chr15,chr15	-,+	FAM169B,IGF1R	15,134786
chr2:23639346-23639965	chr2	+	23639355	23639735	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	510255,-31108
chr3:190230047-190231029	chr3	+	190230109	190231062	True	NM_001167928,NM_001167929,NM_001167931,NM_001167930,NM_134470,NM_207316,NM_002182	chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,+,-,+	IL1RAP,IL1RAP,IL1RAP,IL1RAP,IL1RAP,TMEM207,IL1RAP	777,777,777,777,777,-62444,777
chr12:44200323-44200689	chr12	+	44200331	44200733	True	NM_002822,NM_032256	chr12,chr12	-,+	TWF1,TMEM117	-153,29228
chr1:145548982-145549247	chr1	+	145548983	145549271	True	NM_144698,NR_002328	chr1,chr1	+,-	ANKRD35,GNRHR2	15,-32907
chr9:80764886-80765168	chr9	+	80764897	80765101	True	NM_001098802,NM_002072	chr9,chr9	+,-	CEP78,GNAQ	85889,-118678
chr2:107081337-107082221	chr2	+	107081402	107081910	True	NM_001144013,NR_003506	chr2,chr2	-,+	RGPD3,PLGLA	2949,-78687
chr5:34915110-34915313	chr5	+	34915217	34915331	True	NR_026591,NM_018321,NM_002853	chr5,chr5,chr5	-,+,-	RAD1,BRIX1,RAD1	450,488,499
chr22:17489993-17491478	chr22	+	17490075	17491101	True	NR_015352,NM_001037814	chr22,chr22	+,-	CECR7,GAB4	26358,-963
chr8:11356769-11357793	chr8	+	11356868	11357577	True	NM_001715,NM_053279	chr8,chr8	+,-	BLK,FAM167A	-5401,-32592
chr8:146016135-146016601	chr8	+	146016246	146016593	True	NM_000973,NM_033301,NM_030580,NM_213605	chr8,chr8,chr8,chr8	-,-,-,+	RPL8,RPL8,ZNF34,ZNF517	1263,1187,-3521,7667
chr7:36192410-36192783	chr7	+	36192518	36192746	True	NM_030636,NM_001199707	chr7,chr7	+,-	EEPD1,KIAA0895	89,214086
chr3:38388247-38388488	chr3	+	38388278	38388444	True	NM_005108,NR_028389	chr3,chr3	+,-	XYLB,LOC100128640	-78,107917
chr18:61031970-61032386	chr18	+	61031973	61032387	True	NM_002035,NM_002639	chr18,chr18	-,+	KDSR,SERPINB5	2177,111756
chr19:39988107-39988505	chr19	+	39988226	39988501	True	NM_016941,NM_152361,NM_203486	chr19,chr19,chr19	+,-,+	DLL3,EID2B,DLL3	1055,35043,1055
chr21:38576166-38577095	chr21	+	38576286	38577134	True	NM_006052,NR_026719	chr21,chr21	-,+	DSCR3,DSCR9	62749,3820
chr3:138152867-138153069	chr3	+	138152878	138153056	True	NM_031913,NM_178130	chr3,chr3	+,-	ESYT3,TXNDC6	358,-104150
chr9:109953943-109954878	chr9	+	109953979	109954902	True	NR_031752,NM_002874	chr9,chr9	-,+	MIR548Q,RAD23B	-105263,90641
chr22:50921339-50921739	chr22	+	50921446	50921540	True	NM_024866,NM_017584,NM_002972	chr22,chr22,chr22	+,+,-	ADM2,MIOX,SBF1	-1485,3672,-7982
chr17:15851580-15852010	chr17	+	15851643	15852059	True	NM_000676,NM_001042697	chr17,chr17	+,-	ADORA2B,ZSWIM7	-3463,50997
chr12:108954688-108955484	chr12	+	108954898	108955490	True	NM_213595,NM_014301,NM_014706	chr12,chr12,chr12	+,+,-	ISCU,ISCU,SART3	803,803,29
chr6:41308165-41309009	chr6	+	41308247	41308806	True	NM_001199510,NM_004828,NM_001199509,NM_018643	chr6,chr6,chr6,chr6	+,+,+,-	NCR2,NCR2,NCR2,TREM1	-4770,-4770,-4770,-53790
chr4:114000412-114001145	chr4	+	114000431	114000949	True	NR_031641,NR_029857	chr4,chr4	+,-	MIR1243,MIR302B	27069,-430718
chr10:105881177-105881699	chr10	+	105881260	105881734	True	NM_000494,NM_145247,NM_001002759	chr10,chr10,chr10	-,+,+	COL17A1,MEIR5,MEIR5	-35622,81,194
chr19:44331754-44333459	chr19	+	44331851	44333134	True	NM_182573,NM_181845	chr19,chr19	-,+	LYPD5,ZNF283	-7043,-429
chr12:41881911-41882472	chr12	+	41881910	41882466	True	NM_001099650,NM_013377	chr12,chr12	-,+	GXYLT1,PDZRN4	656257,-50420
chr14:105991611-105991988	chr14	+	105991840	105992037	True	NM_025268,NM_001519	chr14,chr14	+,-	TMEM121,BRF1	915,-224511
chr14:55661042-55661282	chr14	+	55661045	55661129	True	NR_003225,NM_001146015,NM_014750	chr14,chr14,chr14	+,-,-	LGALS3,DLGAP5,DLGAP5	-57395,-2649,-2649
chr7:4720453-4721678	chr7	+	4721107	4721589	True	NM_020144,NM_001037165	chr7,chr7	-,+	PAPOLB,FOXK1	180086,340
chr11:57791738-57792736	chr11	+	57791777	57792502	True	NM_001005211,NM_001005212,NM_001005186	chr11,chr11,chr11	-,+,+	OR9I1,OR9Q1,OR6Q1	94466,-475,5922
chr2:62424409-62424804	chr2	+	62424544	62424847	True	NM_198276,NM_006430,NM_006577	chr2,chr2,chr2	-,-,+	TMEM17,CCT4,B3GNT2	308808,-308753,-1333
chr4:175443024-175443408	chr4	+	175443034	175443282	True	NM_000860,NR_036236,NR_027332,NM_001145816	chr4,chr4,chr4,chr4	-,+,-,-	HPGD,MIR4276,HPGD,HPGD	560,-98139,812,560
chr10:82047405-82049088	chr10	+	82047422	82049087	True	NM_000429,NM_032372	chr10,chr10	-,+	MAT1A,DYDC2	397,67470
chr3:186497655-186498374	chr3	+	186498059	186498278	True	NR_002989,NM_001967,NR_002588,NR_031650,NM_002916,NR_002587,NR_002586	chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,-,+,+	SNORA81,EIF4A2,SNORA4,MIR1248,RFC4,SNORD2,SNORA63	6185,3082,7123,6182,26062,4306,6809
chr1:161360088-161360333	chr1	+	161360224	161360292	True	NM_001013625,NM_003001	chr1,chr1	-,+	C1orf192,SDHC	-22560,-76109
chr11:64322667-64323192	chr11	+	64322826	64323141	True	NM_018484,NM_138734	chr11,chr11	+,-	SLC22A11,NRXN2	-44,87697
chr5:92910050-92910512	chr5	+	92910094	92910559	True	NR_021490,NR_021491,NR_015369,NM_005654	chr5,chr5,chr5,chr5	-,-,-,+	FLJ42709,FLJ42709,FLJ42709,NR2F1	6494,6444,-3595,8483
chr1:19283920-19284293	chr1	+	19284117	19284307	True	NM_001136265,NM_016183	chr1,chr1	-,+	IFFO2,MRTO4	-1291,293767
chrX:117480748-117482292	chrX	+	117480958	117482161	True	NM_019045,NM_001168301,NM_001184966,NM_001184965	chrX,chrX,chrX,chrX	+,-,+,+	WDR44,KLHL13,WDR44,WDR44	-973,-229655,-973,-973
chr4:154126066-154126439	chr4	+	154126119	154126361	True	NR_001562,NM_015271	chr4,chr4	-,+	ANXA2P1,TRIM2	103652,-580
chr12:58014936-58015418	chr12	+	58015051	58015371	True	NM_182947,NM_001478,NM_133489	chr12,chr12,chr12	+,-,+	ARHGEF25,B4GALNT1,SLC26A10	-9884,11664,-1409
chr2:86669382-86669604	chr2	+	86669386	86669616	True	NM_001146688,NM_018433,NM_001164730	chr2,chr2,chr2	+,+,-	KDM3A,KDM3A,REEP1	-853,-1166,-104180
chr8:7738714-7739720	chr8	+	7738723	7739632	True	NM_152250,NM_018661,NM_001081551	chr8,chr8,chr8	-,+,+	DEFB105A,DEFB103B,DEFB103A	-57363,-6,-48
chr8:7738714-7739720	chr8	-	7286963	7287872	False	NM_018661,NM_001040703,NM_001081551	chr8,chr8,chr8	-,+,-	DEFB103B,DEFB105B,DEFB103A	6,57370,48
chr7:64992049-64992742	chr7	+	64992369	64992488	True	NM_000181,NR_027392	chr7,chr7	-,+	GUSB,INTS4L2	454872,120288
chr7:64992049-64992742	chr7	-	64628792	64628911	False	NR_027393,NM_001007253	chr7,chr7	+,-	INTS4L1,ERV3	-27249,-161668
chr7:64992049-64992742	chr7	-	65139999	65140118	False	NM_000181,NR_027392	chr7,chr7	-,+	GUSB,INTS4L2	307241,-27282
chr7:64992049-64992742	chr11	+	77651514	77651633	False	NM_024684,NM_033547	chr11,chr11	+,-	C11orf67,INTS4	-119365,54143
chr16:87634383-87635098	chr16	+	87634385	87635057	True	NM_020655,NM_015144	chr16,chr16	+,-	JPH3,ZCCHC14	1441,-108925
chr7:96636286-96636594	chr7	+	96636293	96636571	True	NM_005222,NR_015448	chr7,chr7	+,-	DLX6,DLX6-AS1	-1054,6856
chr8:42390927-42392140	chr8	+	42390941	42391710	True	NM_138436,NM_006749,NM_001135676,NM_001135675,NM_001135674	chr8,chr8,chr8,chr8,chr8	+,-,+,+,+	C8orf40,SLC20A2,C8orf40,C8orf40,C8orf40	5007,5409,4587,5228,5054
chr1:110199218-110199427	chr1	+	110199290	110199462	True	NM_000850,NM_147148,NR_024538,NM_005272	chr1,chr1,chr1,chr1	+,+,+,-	GSTM4,GSTM4,GSTM4,GNAT2	-643,-643,-643,-43585
chr1:70676320-70678098	chr1	+	70676683	70677733	True	NM_017768,NM_004768,NM_001190987	chr1,chr1,chr1	-,+,+	LRRC40,SRSF11,SRSF11	-5322,-5378,-5378
chr11:117199071-117199373	chr11	+	117199078	117199321	True	NM_014956,NM_138973	chr11,chr11	+,-	CEP164,BACE1	-558,-12106
chr11:6734658-6735365	chr11	+	6734814	6735099	True	NM_001004489,NR_003945	chr11,chr11	+,-	OR2AG1,GVINP1	71148,8072
chr6:7395494-7396101	chr6	+	7395846	7395939	True	NM_205864,NM_031480,NM_001170692,NM_001170693,NM_153005	chr6,chr6,chr6,chr6,chr6	-,+,-,-,+	CAGE1,RIOK1,CAGE1,CAGE1,RIOK1	-5904,-5840,-5904,-5904,6940
chr19:4070535-4070790	chr19	+	4070538	4070695	True	NM_015897,NM_015898	chr19,chr19	+,-	PIAS4,ZBTB7A	-62840,-3722
chr20:61730887-61731332	chr20	+	61730890	61731216	True	NR_003245,NR_003244	chr20,chr20	-,+	HAR1B,HAR1A	2505,1427
chr19:23945747-23945994	chr19	+	23945781	23946033	True	NM_138286,NR_003662	chr19,chr19	-,+	ZNF681,RPSAP58	-4088,-16
chr6:10884257-10884583	chr6	+	10884285	10884431	True	NM_004752,NM_001040274	chr6,chr6	-,+	GCM2,SYCP2L	-2187,2632
chr3:33482358-33482716	chr3	+	33482427	33482733	True	NM_001171713,NM_014517,NM_001128161,NM_001128160	chr3,chr3,chr3,chr3	+,-,-,-	FBXL2,UBP1,UBP1,UBP1	-163541,-557,-530,-557
chr14:32561780-32563099	chr14	+	32561804	32563134	True	NR_027263,NM_001173	chr14,chr14	-,+	C14orf128,ARHGAP5	-15899,-15360
chr5:154226681-154227138	chr5	+	154226805	154227014	True	NM_004779,NM_032385	chr5,chr5	+,-	CNOT8,C5orf4	11183,3254
chr9:36035986-36036283	chr9	+	36035986	36036085	True	NM_021111,NM_019897	chr9,chr9	+,-	RECK,OR2S2	824,-77835
chr19:22597618-22598868	chr19	+	22597984	22598398	True	NR_033899,NM_001098626	chr19,chr19	+,-	LOC440518,ZNF98	180660,6800
chr12:53496679-53497957	chr12	+	53496694	53497944	True	NM_002178,NM_003578,NM_032840	chr12,chr12,chr12	+,+,-	IGFBP6,SOAT2,SPRYD3	-5310,-9,-23490
chr19:36248494-36248731	chr19	+	36248594	36248666	True	NM_019104,NM_001039887,NM_144617	chr19,chr19,chr19	+,+,-	LIN37,C19orf55,HSPB6	-9133,377,-664
chr2:43055420-43056016	chr2	+	43055484	43056054	True	NM_020744,NM_012205	chr2,chr2	+,-	MTA3,HAAO	-259864,-35733
chr22:42095212-42095576	chr22	+	42095297	42095501	True	NM_001003796,NM_001142964,NM_152513	chr22,chr22,chr22	-,+,+	NHP2L1,C22orf46,MEI1	-10384,-8801,16
chr6:76206355-76207291	chr6	+	76206582	76207082	True	NM_015687,NM_001100409	chr6,chr6	-,+	FILIP1,SENP6	-3086,104539
chr7:140371480-140371825	chr7	+	140371495	140371702	True	NR_024454,NM_052853	chr7,chr7	-,+	LOC100134713,ADCK2	25232,1250
chr20:45311512-45311790	chr20	+	45311515	45311753	True	NM_030777,NM_033550,NM_001011554,NM_001193340	chr20,chr20,chr20,chr20	+,-,-,-	SLC2A10,TP53RK,SLC13A3,SLC13A3	26525,6573,1421,1421
chr19:41441402-41442120	chr19	+	41441541	41442119	True	NM_030589,NR_001278	chr19,chr19	-,+	CYP2A7,CYP2B7P1	-52884,-11425
chr9:134002558-134003082	chr9	+	134002884	134003130	True	NM_005085,NM_033387	chr9,chr9	+,-	NUP214,FAM78A	-1963,148830
chr10:134603888-134604103	chr10	+	134603938	134604142	True	NM_005539,NM_177400	chr10,chr10	+,-	INPP5A,NKX6-2	-252636,-4401
chr6:152128985-152129273	chr6	+	152129044	152129210	True	NM_017909,NM_000125,NM_001122741,NM_001122740	chr6,chr6,chr6,chr6	-,+,+,+	RMND1,ESR1,ESR1,ESR1	-355728,-281,-2287,-641
chr6:128242908-128243469	chr6	+	128242931	128243516	True	NM_001164687,NM_001010905	chr6,chr6	-,+	THEMIS,C6orf58	-3155,-344663
chr15:44084793-44085061	chr15	+	44084956	44085016	True	NM_016400,NM_001199885,NM_001033517,NM_001018108,NR_037673,NR_037672,NM_001199878,NM_001199876,NM_001199875,NR_031695	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,-,+,+,+,+,+,+,-	C15orf63,C15orf63,SERINC4,SERF2,SERF2-C15ORF63,SERF2,SERF2,SERF2,SERF2,MIR1282	7602,7602,7289,-967,-833,-833,-432,-833,-833,991
chr1:231761588-231762043	chr1	+	231761664	231762092	True	NM_001164537,NM_018662,NM_001164538,NM_001164539,NM_001012957,NM_001012958,NM_001012959,NR_034037,NM_001164549,NM_001164548,NM_001164542,NM_001164541,NM_001164540,NM_001164547,NM_001164546,NM_001164545,NM_001164544,NM_001164550,NM_001164551,NM_001164552,NM_001164553,NM_001164554,NM_001164555,NM_001164556	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,+,+,-,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+	DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,LOC100287814,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1	468,468,468,468,468,468,468,-13828,468,468,468,468,468,468,468,468,468,468,468,468,468,468,468,468
chr18:3880103-3880662	chr18	+	3880145	3880653	True	NR_024101,NM_004746	chr18,chr18	+,-	FLJ35776,DLGAP1	-286089,-10
chr17:55978566-55979086	chr17	+	55978566	55979092	True	NM_080677,NM_017949	chr17,chr17	+,-	DYNLL2,CUEDC1	181687,1708
chr17:34944207-34945777	chr17	+	34944376	34945757	True	NM_001033580,NM_024308	chr17,chr17	-,+	MYO19,DHRS11	-53071,2468
chr17:37791517-37791808	chr17	+	37791525	37791807	True	NM_006160,NM_006804,NM_001165937,NM_181505,NM_001165938,NM_032192	chr17,chr17,chr17,chr17,chr17,chr17	-,+,+,+,+,+	NEUROD2,STARD3,STARD3,PPP1R1B,STARD3,PPP1R1B	-27350,1525,1525,-6824,1525,-8398
chr14:93535346-93536273	chr14	+	93535520	93536306	True	NM_001142594,NR_002808	chr14,chr14	-,+	ITPK1,ITPK1-AS1	46007,-1774
chr16:200053-200440	chr16	+	200113	200181	True	NM_001077350,NM_005332	chr16,chr16	-,+	NPRL3,HBZ	-11441,2672
chr10:182788-184172	chr10	+	182804	183785	True	NM_006624,NM_001164154,NM_001202465,NM_001202464,NM_001202466,NM_212479	chr10,chr10,chr10,chr10,chr10,chr10	+,-,+,+,+,+	ZMYND11,TUBB8,ZMYND11,ZMYND11,ZMYND11,ZMYND11	-2450,-87300,-2431,-1431,-2431,-2431
chrX:21873844-21874374	chrX	+	21873981	21874409	True	NM_014332,NM_206923	chrX,chrX	-,+	SMPX,YY2	-97751,38
chr11:27084256-27084706	chr11	+	27084496	27084744	True	NM_003986,NM_030771	chr11,chr11	+,-	BBOX1,CCDC34	-22038,300101
chr19:58863866-58864116	chr19	+	58863931	58864115	True	NM_130786,NR_015380	chr19,chr19	-,+	A1BG,A1BG-AS1	800,-646
chr10:111969339-111969575	chr10	+	111969354	111969484	True	NM_001008541,NM_005871,NM_130439	chr10,chr10,chr10	+,-,+	MXI1,SMNDC1,MXI1	504,95273,-2042
chr2:101999385-102000903	chr2	+	101999559	102000846	True	NM_017546,NM_153836	chr2,chr2	+,-	C2orf29,CREG2	-130266,3176
chr2:220172960-220173217	chr2	+	220173000	220173204	True	NM_001199764,NM_001199763,NM_006736,NM_002846	chr2,chr2,chr2,chr2	-,-,+,-	PTPRN,PTPRN,DNAJB2,PTPRN	575,1141,-29011,1141
chr7:74191215-74191662	chr7	+	74191377	74191699	True	NM_173537,NM_000265	chr7,chr7	-,+	GTF2IRD2,NCF1	76192,-3119
chr7:74191215-74191662	chr7	+	72637677	72637997	False	NR_002164,NR_003186	chr7,chr7	-,+	GTF2IRD2P1,NCF1B	47711,-3054
chr7:74191215-74191662	chr7	-	74584431	74584751	False	NM_001003795,NR_003187	chr7,chr7	+,-	GTF2IRD2B,NCF1C	-76135,3115
chr8:12294541-12294756	chr8	+	12294669	12294735	True	NR_026789,NM_001137610	chr8,chr8	+,-	FAM66A,FAM86B2	-75192,-817
chr17:65245221-65245927	chr17	+	65245239	65245914	True	NM_014877,NM_012417	chr17,chr17	-,+	HELZ,PITPNC1	-3920,128009
chr12:571191-571530	chr12	+	571221	571505	True	NM_001042603,NM_173593	chr12,chr12	-,+	KDM5A,B4GALNT3	-72601,-1729
chr22:29733947-29735573	chr22	+	29734233	29735411	True	NR_037426,NR_003686,NM_152237	chr22,chr22,chr22	-,-,+	MIR3653,SNORD125,GAS2L1	-4977,-4986,-31288
chr5:176980304-176980709	chr5	+	176980356	176980614	True	NM_001190946,NM_017510,NR_024019	chr5,chr5,chr5	-,+,-	FAM193B,TMED9,FAM193B	984,38598,984
chr9:130954072-130954394	chr9	+	130954240	130954380	True	NM_001005336,NM_001131018,NM_001131017,NM_001131016	chr9,chr9,chr9,chr9	+,-,-,-	DNM1,CIZ1,CIZ1,CIZ1	11282,-372,-372,-372
chr12:48599692-48601345	chr12	+	48599746	48601322	True	NM_001013635,NM_001004134	chr12,chr12	+,-	C12orf68,OR10AD1	-22438,-2671
chr4:85851674-85852514	chr4	+	85851719	85852549	True	NM_014991,NR_015359	chr4,chr4	-,+	WDFY3,NCRNA00247	35046,35421
chr6:27783667-27784052	chr6	+	27783681	27783858	True	NM_003536,NM_003521,NM_021066,NM_021968,NM_003509,NM_003519	chr6,chr6,chr6,chr6,chr6,chr6	+,+,-,+,+,-	HIST1H3H,HIST1H2BM,HIST1H2AJ,HIST1H4J,HIST1H2AI,HIST1H2BL	-5895,-915,-1163,8044,-7760,-7972
chr12:13235192-13235635	chr12	+	13235260	13235624	True	NM_031289,NM_020853	chr12,chr12	-,+	GSG1,KIAA1467	13135,-37997
chr14:73953257-73955066	chr14	+	73953558	73954822	True	NM_003744,NM_024644	chr14,chr14	-,+	NUMB,C14orf169	-28272,2821
chr14:70234864-70235074	chr14	+	70234869	70235093	True	NM_001039465,NR_029378,NM_006925	chr14,chr14,chr14	+,-,+	SRSF5,LOC100289511,SRSF5	-1091,-439,-1086
chr19:40731259-40732074	chr19	+	40731307	40731927	True	NM_002446,NM_152479,NM_024877	chr19,chr19,chr19	+,-,-	MAP3K10,TTC9B,CNTD2	-33707,-7001,720
chr15:67434699-67435318	chr15	+	67434720	67435342	True	NM_001145103,NM_024666	chr15,chr15	+,-	SMAD3,AAGAB	-4418,111782
chr14:57271233-57272023	chr14	+	57271259	57271884	True	NM_021728,NM_172337,NR_029385	chr14,chr14,chr14	-,-,+	OTX2,OTX2,OTX2OS1	5351,512,8016
chr8:144778909-144779114	chr8	+	144778966	144779154	True	NR_015445,NM_001162914	chr8,chr8	+,-	BREA2,LOC100130274	130,11175
chr2:128617062-128617347	chr2	+	128617248	128617380	True	NM_032740,NM_004805	chr2,chr2	+,-	SFT2D3,POLR2D	-158702,-1519
chr2:25012882-25013336	chr2	+	25012983	25013381	True	NM_001013663,NM_001199803,NM_024322	chr2,chr2,chr2	-,+,+	C2orf79,CENPO,CENPO	2920,2793,2949
chr1:154842967-154843185	chr1	+	154842994	154843224	True	NM_001826,NM_001204087,NM_002249	chr1,chr1,chr1	+,-,-	CKS1B,KCNN3,KCNN3	103893,-240,-240
chr12:32652259-32652669	chr12	+	32652293	32652666	True	NM_001040436,NM_139241	chr12,chr12	-,+	YARS2,FGD4	256272,2374
chr20:31062133-31062361	chr20	+	31062159	31062349	True	NM_080616,NR_034152	chr20,chr20	-,+	C20orf112,LOC149950	8989,112931
chr20:30099260-30100014	chr20	+	30099860	30099992	True	NM_001037500,NM_178582,NM_178580,NM_030789,NM_178581	chr20,chr20,chr20,chr20,chr20	-,+,+,+,+	DEFB124,HM13,HM13,HM13,HM13	-39044,2248,2248,2248,2248
chr6:42945902-42946115	chr6	+	42945915	42946161	True	NM_006245,NM_180976,NM_000287,NM_180977	chr6,chr6,chr6,chr6	+,+,-,+	PPP2R5D,PPP2R5D,PEX6,PPP2R5D	6168,6168,870,6168
chr7:128043016-128044272	chr7	+	128043068	128044259	True	NM_000883,NM_001142576,NM_001142574,NM_001142575,NM_001142573,NM_183243,NM_001098786,NM_001102605	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,-,+,-	IMPDH1,IMPDH1,IMPDH1,IMPDH1,IMPDH1,IMPDH1,C7orf68,IMPDH1	5827,5827,1815,1815,1815,5827,51624,5827
chr9:132585432-132585666	chr9	+	132585438	132585650	True	NM_001110303,NM_000113	chr9,chr9	+,-	USP20,TOR1A	12045,841
chr1:108769408-108770536	chr5	-	85588068	85588922	False	NR_003719,NR_036243	chr5,chr5	+,-	NBPF22P,MIR4280	-9857,821899
chr1:108769408-108770536	chr1	+	108769530	108770526	True	NM_001143987,NM_001143989	chr1,chr1	+,-	NBPF6,NBPF4	222377,16227
chr1:108769408-108770536	chr1	-	109009061	109010057	False	NM_001102592,NM_001143988	chr1,chr1	-,+	HENMT1,NBPF6	193737,-16208
chr5:94736512-94737528	chr5	+	94736648	94737517	True	NM_024717,NM_152548	chr5,chr5	-,+	MCTP1,FAM81B	-116369,-9651
chr8:144450101-144450419	chr8	+	144450201	144450463	True	NR_026785,NM_052924	chr8,chr8	-,+	C8orf51,RHPN1	392,561
chr13:51492566-51492919	chr13	+	51492612	51492912	True	NM_001142279,NM_024570,NM_198989	chr13,chr13,chr13	+,+,-	RNASEH2B,RNASEH2B,DLEU7	-8862,-8862,-74727
chr1:182557943-182558162	chr1	+	182557948	182558140	True	NR_036490,NM_021133	chr1,chr1	+,-	LOC284648,RNASEL	26134,304
chrX:17869856-17871148	chrX	+	17870141	17871163	True	NM_006746,NM_001172739,NM_001172732,NR_033349,NR_033348,NM_021785,NM_001172743	chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,-,-,-,-,-,-	SCML1,RAI2,RAI2,RAI2,RAI2,RAI2,RAI2	-114600,8344,8344,7834,7834,8344,8344
chr9:131548945-131549302	chr9	+	131549044	131549320	True	NM_018201,NM_006336	chr9,chr9	+,-	TBC1D13,ZER1	189,-14846
chr2:112637921-112639481	chr2	+	112638357	112639279	True	NM_022662,NM_006343	chr2,chr2	-,+	ANAPC1,MERTK	2520,16911
chr7:105609031-105609456	chr7	+	105609118	105609260	True	NM_152750,NM_152749	chr7,chr7	+,-	CDHR3,ATXN7L1	-5525,-92087
chr17:28886426-28886985	chr17	+	28886684	28887002	True	NM_206832,NM_015594	chr17,chr17	-,+	TMIGD1,TBC1D29	-225619,-151
chr1:120925972-120927160	chr1	+	120926084	120927076	True	NM_001004340,NR_027337,NM_001017986	chr1,chr1,chr1	-,+,-	FCGR1B,HIST2H2BA,FCGR1B	8919,-20114,8919
chr1:120925972-120927160	chr1	-	149763133	149764125	False	NM_001161334,NM_000566	chr1,chr1	-,+	HIST2H2BF,FCGR1A	19866,-8935
chr1:120925972-120927160	chr1	-	149378196	149379195	False	NR_027484,NM_001024599	chr1,chr1	+,-	FCGR1C,HIST2H2BF	-8963,20097
chr15:83211248-83212544	chr15	+	83211287	83212563	True	NM_001199057,NR_033579,NM_001021	chr15,chr15,chr15	-,+,-	LOC100505503,LOC440297,RPS17	-2079,-81305,-2079
chr15:83211248-83212544	chr15	+	82826945	82828221	False	NM_001199057,NR_033579,NM_001021	chr15,chr15,chr15	-,+,-	LOC100505503,LOC440297,RPS17	-2080,-73549,-2080
chr17:10431167-10431451	chr17	+	10431167	10431272	True	NM_005963,NM_020233	chr17,chr17	-,+	MYH1,C17orf48	-9308,169654
chr10:102666473-102667776	chr10	+	102667041	102667717	True	NM_001136123,NR_024245,NM_018121,NM_176792	chr10,chr10,chr10,chr10	+,+,+,-	FAM178A,FAM178A,FAM178A,MRPL43	4608,4608,4608,79605
chr3:64673987-64674307	chr3	+	64673996	64674356	True	NM_182920,NR_030317	chr3,chr3	-,+	ADAMTS9,MIR548A2	-631,31326
chr12:85458188-85459653	chr12	+	85459103	85459662	True	NM_001100917,NM_001079910	chr12,chr12	-,+	TSPAN19,LRRIQ1	-29048,-29055
chr10:76870322-76870664	chr10	+	76870358	76870531	True	NM_001007271,NM_001007272,NM_144660,NM_001007273,NM_001174156	chr10,chr10,chr10,chr10,chr10	-,-,+,-,+	DUSP13,DUSP13,SAMD8,DUSP13,SAMD8	-1388,-1388,861,-1388,861
chr1:169765050-169766844	chr1	+	169765058	169766538	True	NM_018186,NM_033418	chr1,chr1	+,-	C1orf112,METTL18	-561,-1027
chr3:52444386-52444683	chr3	+	52444569	52444653	True	NM_173341,NM_004656,NM_016483	chr3,chr3,chr3	+,-,+	PHF7,BAP1,PHF7	-93,-560,-93
chr2:198246018-198246276	chr2	+	198246109	198246282	True	NM_025147,NM_012433	chr2,chr2	+,-	COQ10B,SF3B1	71948,53540
chr20:42577951-42579023	chr20	+	42578088	42578721	True	NM_001098798,NM_176791	chr20,chr20	+,-	TOX2,GTSF1L	-3610,-222446
chr15:68339897-68341665	chr15	+	68340221	68341689	True	NM_016166,NM_001031733	chr15,chr15	+,-	PIAS1,CALML4	4882,156809
chr6:125621900-125622468	chr6	+	125621932	125622461	True	NM_016063,NM_001003395	chr6,chr6	-,+	HDDC2,TPD52L1	872,-146576
chr8:66548394-66548731	chr8	+	66548530	66548690	True	NM_018120,NM_014637,NM_001145839	chr8,chr8,chr8	-,+,+	ARMC1,MTFR1,MTFR1	-2078,8197,8197
chr2:99225821-99226301	chr2	+	99225862	99226324	True	NM_001008215,NM_014044	chr2,chr2	-,+	C2orf64,UNC50	-907,-872
chr19:23941709-23942484	chr19	+	23941742	23942166	True	NM_138286,NR_003662	chr19,chr19	-,+	ZNF681,RPSAP58	-49,3649
chr9:125690407-125690745	chr9	+	125690412	125690581	True	NM_012197,NM_020924	chr9,chr9	+,-	RABGAP1,ZBTB26	12706,3257
chr10:73845067-73846282	chr10	+	73845169	73846129	True	NM_001134434,NM_004273,NM_014767	chr10,chr10,chr10	-,+,-	SPOCK2,CHST3,SPOCK2	2711,-121100,2711
chrX:70128260-70129387	chrX	+	70128316	70128934	True	NM_001003811,NM_001170931,NM_031276	chrX,chrX,chrX	-,+,-	TEX11,FOXO4,TEX11	-71,187064,-71
chr4:701005-701237	chr4	+	701014	701206	True	NM_006315,NM_032219	chr4,chr4	+,-	PCGF3,MFSD7	-1492,-18041
chr15:34657498-34657804	chr15	+	34657556	34657816	True	NM_175741,NM_153613	chr15,chr15	+,-	C15orf55,LPCAT4	-19541,1629
chr22:50216780-50216999	chr22	+	50216791	50217017	True	NM_014838,NM_014577	chr22,chr22	+,-	ZBED4,BRD1	30479,1485
chr7:91861535-91862166	chr7	+	91861535	91862006	True	NM_019004,NM_004912	chr7,chr7	+,-	ANKIB1,KRIT1	13541,13264
chr1:150693300-150693882	chr1	+	150693316	150693932	True	NM_001199829,NM_032132,NR_036211	chr1,chr1,chr1	-,-,+	HORMAD1,HORMAD1,MIR4257	34,34,-168962
chr3:161019755-161021672	chr3	+	161019795	161021711	True	NM_015938,NM_001040100	chr3,chr3	+,-	NMD3,C3orf57	-80760,68210
chr1:97191485-97192026	chr1	+	97191687	97191835	True	NM_000110,NM_021190	chr1,chr1	-,+	DPYD,PTBP2	1194834,-4564
chr19:56160778-56161404	chr19	+	56160804	56161420	True	NM_007279,NM_016535,NM_016202,NM_013301,NM_001163423,NM_203374,NM_207115,NM_001012478	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,-,+,+	U2AF2,ZNF581,ZNF580,CCDC106,ZNF580,ZNF784,ZNF580,U2AF2	3995,-5869,-7437,-1901,-7392,-24863,-8463,3995
chr22:50707722-50707948	chr22	+	50707730	50707970	True	NM_031454,NM_002969,NM_002751	chr22,chr22,chr22	+,-,-	SELO,MAPK12,MAPK11	-68373,-7641,859
chr5:139857-140287	chr5	+	139971	140181	True	NM_052909,NM_145265	chr5,chr5	+,-	PLEKHG4B,CCDC127	191,78166
chr6:15249587-15249910	chr6	+	15249619	15249945	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	-3143,413394
chr5:112852418-112853676	chr5	+	112852559	112853354	True	NM_022828,NM_001085377	chr5,chr5	+,-	YTHDC2,MCC	-3221,-28032
chr3:172143811-172145346	chr3	+	172143972	172145141	True	NM_018098,NM_198407	chr3,chr3	+,-	ECT2,GHSR	327156,21156
chr3:172143811-172145346	chr3	+	116365492	116365553	False	NR_015391,NM_002338	chr3,chr3	+,-	NCRNA00295,LSAMP	63081,-201107
chr3:49223927-49225835	chr3	+	49224432	49225751	True	NM_001080528,NM_178173	chr3,chr3	-,+	LOC646498,CCDC36	3590,10109
chr5:170732805-170733650	chr5	+	170732853	170733650	True	NM_021025,NR_037474	chr5,chr5	+,-	TLX3,MIR3912	2637,80164
chr19:46916718-46916987	chr19	+	46916772	46917036	True	NM_006247,NM_032040	chr19,chr19	+,-	PPP5C,CCDC8	-66572,-67
chr1:169071753-169072773	chr1	+	169071793	169072729	True	NM_001677,NM_013330	chr1,chr1	+,-	ATP1B1,NME7	3217,264509
chr11:64764596-64765496	chr11	+	64764783	64765545	True	NM_001199745,NM_138456	chr11,chr11	+,-	ARL2,BATF2	16039,-266
chr7:44124677-44126196	chr7	+	44125018	44126018	True	NM_013284,NM_001129	chr7,chr7	-,+	POLM,AEBP1	-2889,17941
chr2:96076636-96077503	chr2	+	96076652	96077448	True	NM_001164464,NM_016044	chr2,chr2	-,+	TRIM43B,FAHD2A	73081,-8255
chr1:76261181-76261600	chr1	+	76261311	76261380	True	NM_004582,NR_003042,NM_080868,NR_002749,NR_002748,NM_002440	chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,+,+,+	RABGGTB,SNORD45C,ASB17,SNORD45A,SNORD45B,MSH4	-9478,-8607,136791,-7790,-6202,1249
chr18:29077757-29077985	chr18	+	29077760	29077940	True	NM_004775,NM_001943	chr18,chr18	-,+	B4GALT6,DSG2	186796,86
chr22:36819219-36819553	chr22	+	36819398	36819554	True	NM_145343,NM_002473	chr22,chr22	+,-	APOL1,MYH9	-170332,-35335
chr10:5706200-5707949	chr10	+	5706332	5707950	True	NM_024701,NR_024581,NM_017782,NR_037164	chr10,chr10,chr10,chr10	-,-,+,-	ASB13,ASB13,C10orf18,ASB13	658,658,18850,658
chr19:8926429-8927032	chr19	+	8926517	8927067	True	NM_145208,NM_144693	chr19,chr19	+,-	MBD3L1,ZNF558	26201,6550
chr19:17516771-17518157	chr19	+	17516993	17518012	True	NM_004335,NM_138401	chr19,chr19	-,+	BST2,FAM125A	-609,12899
chr7:129913330-129914374	chr7	+	129913569	129914406	True	NM_001869,NM_032842	chr7,chr7	+,-	CPA2,TMEM209	-6917,-68231
chr19:9203431-9204179	chr19	+	9203793	9204195	True	NM_001005193,NM_001004456	chr19,chr19	-,+	OR7G2,OR1M1	9837,51
chr14:51347187-51348493	chr14	+	51347216	51348434	True	NM_181533,NM_181814,NM_182944	chr14,chr14,chr14	+,+,-	ABHD12B,ABHD12B,NIN	-8389,-8389,-49377
chr2:70117280-70118973	chr2	+	70117440	70118568	True	NM_006857,NR_037862,NM_152792	chr2,chr2,chr2	+,+,-	SNRNP27,SNRNP27,ASPRV1	2506,2506,70879
chr19:3503859-3504084	chr19	+	3503864	3504002	True	NM_031304,NM_016263,NM_001145165	chr19,chr19,chr19	-,+,-	DOHH,FZR1,DOHH	-3243,2292,-2926
chr2:219573745-219575454	chr2	+	219574490	219575438	True	NM_022453,NM_014640	chr2,chr2	-,+	RNF25,TTLL4	-37709,129
chr12:5300989-5302480	chr12	+	5301054	5302494	True	NM_006422,NM_002234	chr12,chr12	-,+	AKAP3,KCNA5	-546711,-148020
chr6:150921654-150921903	chr6	+	150921778	150921952	True	NM_001029884,NM_024518	chr6,chr6	+,-	PLEKHG1,ULBP3	-830,-531576
chr22:31650799-31652143	chr22	+	31651038	31651900	True	NM_001031801,NM_001135911,NM_016733	chr22,chr22,chr22	+,-,+	LIMK2,PIK3IP1,LIMK2	-6744,36670,-6744
chr16:55806631-55806964	chr16	+	55806641	55806959	True	NR_003276,NM_001025194	chr16,chr16	+,-	CES1P1,CES1	-12181,60166
chr3:57310023-57310346	chr3	+	57310039	57310307	True	NM_012096,NM_130387	chr3,chr3	+,-	APPL1,ASB14	-48333,2734
chr19:106078-107474	chr19	+	106446	107409	True	NR_026820,NM_001005240	chr19,chr19	-,+	FAM138F,OR4F17	-28756,3269
chr19:106078-107474	chr15	-	102465432	102465997	False	NR_026819,NM_001004195	chr15,chr15	+,-	FAM138E,OR4F4	29090,-2170
chr19:106078-107474	chr1	+	64862	65825	False	NM_001005221,NR_028325	chr1,chr1	-,+	OR4F29,LOC100132062	556259,258066
chr2:200819917-200820163	chr2	+	200820029	200820099	True	NM_001039693,NM_024520,NR_004862	chr2,chr2,chr2	-,+,-	C2orf60,C2orf47,C2orf60	410,-40,410
chr6:28048464-28048711	chr6	+	28048478	28048756	True	NM_003447,NR_002936	chr6,chr6	+,-	ZNF165,LOC222699	-54,138001
chr6:58182974-58183873	chr6	+	58182986	58183642	True	NM_000947,NR_003660	chr6,chr6	+,-	PRIM2,GUSBP4	-1000615,104132
chr6:58182974-58183873	chr6	-	26686593	26686643	False	NM_013375,NM_024639	chr6,chr6	+,-	ABT1,ZNF322A	-89464,-26630
chr1:157095103-157095559	chr1	+	157095135	157095519	True	NM_005240,NR_001560	chr1,chr1	-,+	ETV3,CYCSP52	12708,2634
chr11:64702447-64702809	chr11	+	64702475	64702845	True	NM_006244,NM_130769	chr11,chr11	+,-	PPP2R5B,GPHA2	-10383,565
chr16:58548568-58549084	chr16	+	58548698	58549021	True	NM_001160305,NR_002978,NM_024860	chr16,chr16,chr16	+,-,+	SETD6,SNORA46,SETD6	361,33567,361
chr21:17589108-17590762	chr21	+	17589130	17590122	True	NM_003489,NR_027791	chr21,chr21	-,+	NRIP1,C21orf34	-1152004,-22485
chr1:234494873-234495832	chr1	+	234494886	234495732	True	NM_001012985,NM_005646	chr1,chr1	+,-	C1orf31,TARBP1	13696,119167
chr6:169654661-169655220	chr6	+	169654699	169655259	True	NM_001029863,NM_003247	chr6,chr6	+,-	C6orf120,THBS2	446997,-562
chr7:70591587-70593446	chr7	+	70591884	70593383	True	NM_022479,NR_037477	chr7,chr7	+,-	WBSCR17,MIR3914-1	4405,179423
chr2:97532131-97532418	chr2	+	97532280	97532466	True	NM_016466,NM_017789,NM_199078	chr2,chr2,chr2	-,-,+	ANKRD39,SEMA4C,CNNM3	-8524,3319,-50340
chr9:34610924-34611278	chr9	+	34611007	34611311	True	NM_000155,NM_024348,NM_148178,NM_148179,NM_007234	chr9,chr9,chr9,chr9,chr9	+,-,-,-,-	GALT,DCTN3,C9orf23,C9orf23,DCTN3	35323,9235,840,840,9235
chr20:5106771-5107201	chr20	+	5106929	5107166	True	NM_182649,NM_002592,NR_028370,NM_003818	chr20,chr20,chr20,chr20	-,-,+,+	PCNA,PCNA,PCNA-AS1,CDS2	-6282,153,-6749,315
chr7:148788598-148789126	chr7	+	148788632	148788922	True	NM_152411,NM_020781	chr7,chr7	-,+	ZNF786,ZNF398	-763,34585
chr9:4742370-4742692	chr9	+	4742413	4742589	True	NM_001199855,NM_001199854,NM_005772,NM_001199853,NM_001199852,NM_016282	chr9,chr9,chr9,chr9,chr9,chr9	-,-,+,-,-,-	AK3,AK3,RCL1,AK3,AK3,AK3	-614,-1260,50244,-370,-1104,-1104
chr9:79521505-79521831	chr9	+	79521557	79521865	True	NM_001013735,NM_015225	chr9,chr9	+,-	FOXB2,PRUNE2	112705,-554
chr19:2976097-2976797	chr19	+	2976128	2976778	True	NM_021217,NM_001143986,NM_024760	chr19,chr19,chr19	-,+,+	ZNF77,TLE6,TLE6	-31159,757,757
chr9:35754620-35755490	chr9	+	35754739	35755461	True	NM_020944,NM_001080496,NM_001044264	chr9,chr9,chr9	-,+,-	GBA2,RGP1,MSMP	-5514,-5513,-465
chr2:169660864-169661214	chr2	+	169660950	169661252	True	NM_020675,NM_001171632,NM_001039724,NM_052946	chr2,chr2,chr2,chr2	-,+,+,+	SPC25,NOSTRIN,NOSTRIN,NOSTRIN	85742,-1910,-1910,-1903
chr1:200716040-200716858	chr1	+	200716371	200716855	True	NM_203459,NM_001031725	chr1,chr1	+,-	CAMSAP1L1,DDX59	-7736,-77245
chr1:174971036-174972295	chr1	+	174971180	174972237	True	NM_014412,NM_022100,NM_001007214	chr1,chr1,chr1	+,-,+	CACYBP,MRPS14,CACYBP	-2349,20404,-2670
chrY:9636556-9636951	chrY	+	9636640	9636897	True	NR_001539,NR_003589	chrY,chrY	+,-	TTTY22,TTTY1B	1864,-24712
chrY:9636556-9636951	chrY	-	6233473	6233730	False	NR_001536,NR_003589	chrY,chrY	-,+	TTTY2,TTTY1B	62812,24711
chr3:128210039-128210357	chr3	+	128210106	128210268	True	NM_001145662,NM_001145661,NR_026954,NM_032638	chr3,chr3,chr3,chr3	-,-,+,-	GATA2,GATA2,LOC90246,GATA2	-3342,-2733,16409,1812
chr1:152083610-152083816	chr1	+	152083629	152083835	True	NR_024237,NM_007113	chr1,chr1	+,-	LOC100132111,TCHH	-272735,2771
chr9:46386450-46386895	chr9	+	46386628	46386934	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2755898,300631
chr9:46386450-46386895	chr9	+	67785881	67786189	False	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	8050,140571
chr9:46386450-46386895	chr9	-	44998231	44998519	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-8046,-1367501
chr9:46386450-46386895	chr9	-	45733644	45733958	False	NM_001145196,NR_024060	chr9,chr9	-,+	FAM75A6,FAM27A	-2102914,-6674
chr9:46386450-46386895	chr9	-	46117381	46117687	False	NM_001145196,NR_024060	chr9,chr9	-,+	FAM75A6,FAM27A	-2486651,-390403
chr2:120437263-120437485	chr2	+	120437280	120437534	True	NM_001105199,NM_001105198,NM_002980,NM_030577	chr2,chr2,chr2,chr2	+,+,-,+	TMEM177,TMEM177,SCTR,TMEM177	-589,-589,-155252,-589
chr8:146077104-146077693	chr8	+	146077126	146077674	True	NM_001081003,NM_001081004,NM_014066,NM_003416	chr8,chr8,chr8,chr8	-,-,-,+	COMMD5,COMMD5,COMMD5,ZNF7	1308,827,828,-24274
chr11:67139544-67139746	chr11	+	67139594	67139670	True	NM_001166212,NM_004584,NM_013246	chr11,chr11,chr11	-,+,-	CLCF1,RAD9A,CLCF1	2028,19752,1586
chr19:39279322-39279659	chr19	+	39279393	39279581	True	NM_002307,NM_001042507	chr19,chr19	-,+	LGALS7,LGALS7B	-15236,268
chr1:36040026-36040561	chr1	+	36040086	36040600	True	NM_178548,NM_024874	chr1,chr1	+,-	TFAP2E,KIAA0319L	-1166,-17049
chr3:151050647-151051787	chr3	+	151050997	151051491	True	NM_053002,NM_176876,NM_176894	chr3,chr3,chr3	+,-,-	MED12L,P2RY12,P2RY13	-246386,7150,-3660
chr11:15724687-15725108	chr11	+	15724701	15725091	True	NM_001145819,NM_001042536	chr11,chr11	-,+	SOX6,INSC	699372,-588268
chr11:66359565-66360027	chr11	+	66359620	66360000	True	NM_005125,NM_018219	chr11,chr11	+,-	CCS,CCDC87	689,604
chr13:100258262-100258733	chr13	+	100258307	100258623	True	NM_004951,NM_206808	chr13,chr13	-,+	GPR183,CLYBL	-298558,295
chr13:114143404-114143694	chr13	+	114143407	114143677	True	NM_017905,NM_001014283	chr13,chr13	+,-	TMCO3,DCUN1D2	1630,1396
chr6:151811451-151812762	chr6	+	151811724	151812631	True	NM_025059,NM_017909	chr6,chr6	+,-	C6orf97,RMND1	2543,-38408
chr13:25562311-25563087	chr13	+	25562774	25562988	True	NR_026730,NM_030979	chr13,chr13	-,+	TPTE2P1,PABPC3	-20167,107287
chr10:115933537-115933740	chr10	+	115933537	115933741	True	NR_031747,NM_198795,NM_018017	chr10,chr10,chr10	-,+,-	MIR2110,TDRD1,C10orf118	247,5287,673
chr12:13003337-13003936	chr12	+	13003864	13003978	True	NM_018654,NR_003932	chr12,chr12	-,+	GPRC5D,RPL13AP20	99390,24432
chr14:53019360-53019662	chr14	+	53019368	53019620	True	NM_020784,NM_001160047,NM_001099652	chr14,chr14,chr14	-,-,+	TXNDC16,TXNDC16,GPR137C	-67,-67,245
chr12:54409523-54409914	chr12	+	54409577	54409881	True	NM_014620,NR_003716,NM_022658,NM_153693,NR_003084	chr12,chr12,chr12,chr12,chr12	+,-,+,+,+	HOXC4,HOTAIR,HOXC8,HOXC6,HOXC5	760,-47062,-6738,760,760
chr1:20206723-20208048	chr1	+	20206854	20207820	True	NM_015207,NM_014589	chr1,chr1	+,-	OTUD3,PLA2G2E	1067,42340
chr14:77265213-77265929	chr14	+	77265346	77265625	True	NM_015305,NM_194287	chr14,chr14	-,+	ANGEL1,C14orf166B	13717,27099
chr3:39447506-39448046	chr3	+	39447830	39447992	True	NM_001171174,NR_002325,NM_001012321,NM_002295,NR_002324	chr3,chr3,chr3,chr3,chr3	-,+,+,+,+	CX3CR1,SNORA6,RPSA,RPSA,SNORA62	-124604,1889,1118,211,4552
chr15:72668143-72668462	chr15	+	72668156	72668230	True	NR_027262,NM_000520	chr15,chr15	+,-	C15orf34,HEXA	223,340
chr17:39968545-39968873	chr17	+	39968654	39968884	True	NM_021939,NM_006455	chr17,chr17	+,-	FKBP10,LEPREL4	77,-203
chr13:103447524-103448567	chr13	+	103448017	103448373	True	NM_001159596,NM_024089,NM_017693	chr13,chr13,chr13	+,-,+	BIVM,KDELC1,BIVM	3025,3093,3025
chrX:128975822-128976726	chrX	+	128975917	128976687	True	NM_001008222,NM_018990,NM_016032	chrX,chrX,chrX	-,+,-	ZDHHC9,SASH3,ZDHHC9	924,-62083,1273
chr6:20397919-20398665	chr6	+	20398078	20398707	True	NM_001949,NM_001080480	chr6,chr6	+,-	E2F3,MBOAT1	3429,-185408
chr9:138557254-138557614	chr9	+	138557334	138557603	True	NM_001001676,NM_182974	chr9,chr9	+,-	LCN9,GLT6D1	-2217,-25948
chr2:162024292-162025267	chr2	+	162024450	162024982	True	NM_016836,NM_001199135	chr2,chr2	-,+	RBMS1,TANK	-674132,-7571
chr17:60004630-60004908	chr17	+	60004634	60004822	True	NR_026641,NM_020748,NM_001144933	chr17,chr17,chr17	-,-,+	INTS2,INTS2,EFCAB3	605,605,442756
chr3:15542780-15543744	chr3	+	15543057	15543620	True	NM_033083,NM_080538,NR_036232	chr3,chr3,chr3	+,-,-	EAF1,COLQ,MIR4270	-74044,-2678,-5242
chr14:23750265-23750611	chr14	+	23750291	23750579	True	NM_004050,NM_020834	chr14,chr14	+,-	BCL2L2,HOMEZ	25391,4780
chr11:27495589-27496305	chr11	+	27495727	27496142	True	NM_018490,NR_002832	chr11,chr11	-,+	LGR4,BDNF-AS1	-1393,32256
chr7:6615483-6616473	chr7	+	6615705	6616401	True	NM_001145118,NM_001134387,NM_001134388,NM_001134389,NM_018106	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	GRID2IP,ZDHHC4,ZDHHC4,ZDHHC4,ZDHHC4	-24638,663,663,663,663
chrY:2620822-2621866	chrY	+	2620943	2621601	True	NR_003254,NM_003140	chrY,chrY	+,-	XGPY2,SRY	-659,34245
chrY:2620822-2621866	chrY	-	14618252	14618302	False	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	155995,-84863
chrY:2620822-2621866	chrX	+	2670943	2671601	False	NM_001141919,NM_001141920,NR_003254,NR_037842,NM_175569	chrX,chrX,chrX,chrX,chrX	+,+,+,-,+	XG,XG,XGPY2,NCRNA00102,XG	-903,-903,-659,-137555,-903
chr16:28306708-28307287	chr16	+	28306735	28306977	True	NM_001024401,NM_015171	chr16,chr16	+,-	SBK1,XPO6	-2946,-83545
chr2:56145017-56146156	chr2	+	56145061	56146154	True	NM_001080433,NM_001039348,NM_001039349	chr2,chr2,chr2	+,-,-	CCDC85A,EFEMP1,EFEMP1	265103,5194,5194
chr3:69948259-69949420	chr3	+	69948269	69949261	True	NM_015123,NM_198177	chr3,chr3	-,+	FRMD4B,MITF	-512839,-32945
chr22:31064169-31064374	chr22	+	31064174	31064398	True	NM_152511,NM_030758	chr22,chr22	-,+	DUSP18,OSBP2	-302,26394
chr21:43920019-43921540	chr21	+	43920469	43921453	True	NM_080860,NM_018964	chr21,chr21	-,+	RSPH1,SLC37A1	-4068,-778
chr6:7388467-7389574	chr6	+	7388484	7389543	True	NM_205864,NM_031480,NM_001170692,NM_001170693	chr6,chr6,chr6,chr6	-,+,-,-	CAGE1,RIOK1,CAGE1,CAGE1	450,518,450,450
chr19:14889351-14889924	chr19	+	14889350	14889928	True	NM_152917,NM_152916,NM_152919,NM_152918,NM_032433,NM_013447,NM_152920,NM_152921	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,+,-,-,-	EMR2,EMR2,EMR2,EMR2,ZNF333,EMR2,EMR2,EMR2	3,3,3,3,-88531,3,3,3
chr19:14889351-14889924	chr19	-	14491227	14491666	False	NM_078481,NM_001025160,NM_001204057,NM_001784	chr19,chr19,chr19,chr19	+,+,-,+	CD97,CD97,DDX39A,CD97	546,546,38679,546
chr1:192300284-192301935	chr1	+	192300288	192301854	True	NM_001039152,NM_001199261	chr1,chr1	+,-	RGS21,UCHL5	-14225,726731
chr14:23067459-23067661	chr14	+	23067499	23067709	True	NM_022060,NM_001344	chr14,chr14	+,-	ABHD4,DAD1	-403,-9356
chr22:24989150-24989474	chr22	+	24989171	24989305	True	NM_005265,NM_013430,NM_207644,NM_001032364	chr22,chr22,chr22,chr22	+,+,-,+	GGT1,GGT1,C22orf36,GGT1	9874,-9504,-136,9818
chr20:30595829-30597350	chr20	+	30596031	30597068	True	NM_030815,NM_080625	chr20,chr20	-,+	PDRG1,C20orf160	-56148,1176
chr1:247493335-247494018	chr1	+	247493335	247493929	True	NM_032752,NM_173858	chr1,chr1	-,+	ZNF496,VN1R5	1166,-74012
chr1:226742724-226743738	chr1	+	226742749	226743535	True	NM_001618,NM_001003665	chr1,chr1	-,+	PARP1,C1orf95	-146948,-6305
chr3:45190065-45191311	chr3	+	45190247	45191159	True	NM_022842,NM_178181,NM_003278	chr3,chr3,chr3	-,-,+	CDCP1,CDCP1,CLEC3B	-2333,-2333,-122545
chr9:127540108-127540358	chr9	+	127540125	127540349	True	NM_001489,NM_033334,NM_182487	chr9,chr9,chr9	-,-,+	NR6A1,NR6A1,OLFML2A	-6549,-6549,-739
chr12:111475540-111475842	chr12	+	111475621	111475891	True	NM_000432,NM_015267	chr12,chr12	-,+	MYL2,CUX2	-117217,-3844
chr20:61296362-61296617	chr20	+	61296401	61296647	True	NM_016354,NR_024470	chr20,chr20	+,-	SLCO4A1,LOC100127888	-22655,1376
chr6:168688774-168689891	chr6	+	168689085	168689917	True	NM_214462,NM_001166412	chr6,chr6	-,+	DACT2,SMOC2	30535,151913
chr18:57566656-57567050	chr18	+	57566667	57566951	True	NM_133459,NM_021127	chr18,chr18	-,+	CCBE1,PMAIP1	-202023,240
chr8:17025098-17025698	chr8	+	17025361	17025747	True	NM_013354,NM_016353	chr8,chr8	-,+	CNOT7,ZDHHC2	78690,-11583
chr10:120842730-120843751	chr10	+	120843013	120843603	True	NM_207009,NM_003750	chr10,chr10	+,-	FAM45A,EIF3A	20007,-2679
chr20:10198820-10199380	chr20	+	10198827	10199359	True	NM_130811,NM_018848,NM_003081	chr20,chr20,chr20	+,-,+	SNAP25,MKKS,SNAP25	117,213261,117
chr8:37455147-37457121	chr8	+	37455248	37457034	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	96266,148580
chr12:48577155-48577415	chr12	+	48577161	48577395	True	NM_001013635,NM_001004134	chr12,chr12	+,-	C12orf68,OR10AD1	-8,19730
chr19:49017204-49017643	chr19	+	49017244	49017642	True	NM_177973,NM_001080434	chr19,chr19	+,-	SULT2B1,LMTK3	37786,-798
chr5:176240010-176241398	chr5	+	176240070	176241258	True	NM_133369,NM_002115	chr5,chr5	+,-	UNC5A,HK3	-2561,85125
chr1:149814183-149814538	chr1	+	149814245	149814489	True	NR_036461,NM_001040874,NM_021059,NM_003516,NM_001005464	chr1,chr1,chr1,chr1,chr1	-,-,-,-,-	HIST2H2BC,HIST2H2AA4,HIST2H3C,HIST2H2AA3,HIST2H3A	7901,-23,-1480,-23,-1480
chr1:149814183-149814538	chr1	-	149822456	149822700	False	NR_036461,NM_001040874,NM_021059,NM_003516,NM_001005464	chr1,chr1,chr1,chr1,chr1	-,+,+,+,+	HIST2H2BC,HIST2H2AA4,HIST2H3C,HIST2H2AA3,HIST2H3A	-116,23,1480,23,1480
chr19:44282287-44282684	chr19	+	44282312	44282732	True	NM_181845,NM_002250	chr19,chr19	+,-	ZNF283,KCNN4	48740,2727
chr11:61686744-61687701	chr11	+	61686768	61687432	True	NM_013401,NM_001139443	chr11,chr11	-,+	RAB3IL1,BEST1	-1771,29923
chr19:11852079-11852704	chr19	+	11852126	11852760	True	NM_152355,NM_001080493	chr19,chr19	+,-	ZNF441,ZNF823	25054,-2366
chr1:42620685-42620935	chr1	+	42620732	42620976	True	NM_007102,NM_033553	chr1,chr1	+,-	GUCA2B,GUCA2A	-1691,9469
chr1:68152308-68153049	chr1	+	68152383	68153066	True	NM_018841,NM_001924,NM_001199741,NM_001199742	chr1,chr1,chr1,chr1	-,+,+,+	GNG12,GADD45A,GADD45A,GADD45A	146139,-1574,-1574,-1574
chr3:49841397-49842260	chr3	+	49841421	49842177	True	NM_003335,NM_001007540,NM_203370	chr3,chr3,chr3	-,-,+	UBA7,CDHR4,C3orf54	9264,-4167,-785
chr19:19433331-19433739	chr19	+	19433495	19433651	True	NM_172231,NM_015329	chr19,chr19	-,+	SUGP1,MAU2	-2188,-1916
chr8:57234355-57236155	chr8	+	57234475	57235577	True	NM_138969,NM_024300	chr8,chr8	-,+	SDR16C5,CHCHD7	-1234,-110214
chr17:46180931-46181189	chr17	+	46180934	46181072	True	NM_001127228,NM_152244,NM_006807,NM_013323	chr17,chr17,chr17,chr17	-,+,-,+	CBX1,SNX11,CBX1,SNX11	-2051,3847,-2374,3874
chr22:31801449-31801765	chr22	+	31801457	31801658	True	NM_032051,NM_004147	chr22,chr22	-,+	PATZ1,DRG1	-59208,-5969
chr1:15480750-15481101	chr1	+	15480758	15481016	True	NM_018022,NM_001136217,NM_001136218,NM_001136216,NR_027136	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	TMEM51,TMEM51,TMEM51,TMEM51,C1orf126	-580,-1781,-580,-1781,-1798
chr12:53850735-53851779	chr12	+	53850735	53851709	True	NM_001128911,NM_001128912,NM_001128913,NM_001128914,NM_031989,NM_005016,NM_001193511,NM_001098620	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,+,+,+,+,-,+	PCBP2,PCBP2,PCBP2,PCBP2,PCBP2,PCBP2,MAP3K12,PCBP2	-4903,-4903,-4903,-4903,-4903,-4903,41795,-4903
chr1:36851925-36853110	chr1	+	36851929	36853141	True	NM_024676,NM_032017	chr1,chr1	+,-	SH3D21,STK40	-79272,-444
chr6:83885391-83887113	chr6	+	83885640	83887093	True	NM_001199918,NM_033411	chr6,chr6	-,+	PGM3,RWDD2A	15969,15938
chr2:120437485-120438540	chr2	+	120437828	120438560	True	NM_001105199,NM_001105198,NM_002980,NM_030577	chr2,chr2,chr2,chr2	+,+,-,+	TMEM177,TMEM177,SCTR,TMEM177	-1136,-1136,-155800,-1136
chr1:209942071-209943068	chr1	+	209942075	209943105	True	NM_152485,NM_025228	chr1,chr1	-,+	C1orf74,TRAF3IP3	14837,-12732
chr19:49110509-49110758	chr19	+	49110575	49110753	True	NM_017708,NM_133498	chr19,chr19	-,+	FAM83E,SPACA4	5991,-626
chr8:39166820-39167529	chr8	+	39166873	39167576	True	NR_001448,NR_001569	chr8,chr8	+,-	ADAM5P,ADAM3A	4605,212953
chr22:17687269-17688324	chr22	+	17687457	17688163	True	NM_177405,NM_017424,NR_024483	chr22,chr22,chr22	-,-,+	CECR1,CECR1,CECR4	-6912,2666,-47237
chr17:26628959-26629169	chr17	+	26628958	26629083	True	NM_014573,NR_028334	chr17,chr17	+,-	TMEM97,FLJ40504	17037,5377
chr9:119944834-119946531	chr9	+	119944913	119946357	True	NM_012210,NR_003708	chr9,chr9	+,-	TRIM32,SNORA70C	-495383,-1433
chr10:101491018-101491622	chr10	+	101491075	101491635	True	NM_015960,NM_078470,NM_004376	chr10,chr10,chr10	+,-,-	CUTC,COX15,COX15	322,838,838
chr12:123702514-123704022	chr12	+	123702845	123703875	True	NM_022782,NM_152269	chr12,chr12	-,+	MPHOSPH9,C12orf65	2623,13968
chr1:63151213-63151891	chr1	+	63151212	63151712	True	NM_033407,NM_014495	chr1,chr1	-,+	DOCK7,ANGPTL3	2307,-88076
chr19:33168331-33168641	chr19	+	33168368	33168624	True	NM_207391,NM_032139	chr19,chr19	+,-	RGS9BP,ANKRD27	-2112,-2266
chr20:33735192-33735517	chr20	+	33735211	33735495	True	NM_018217,NM_006404,NR_026728,NM_001145025	chr20,chr20,chr20,chr20	-,+,-,-	EDEM2,PROCR,EDEM2,EDEM2	-50,24278,-50,-50
chr19:4900250-4901548	chr19	+	4900454	4900734	True	NM_001080523,NM_001048201,NM_013282	chr19,chr19,chr19	-,+,+	ARRDC5,UHRF1,UHRF1	2195,8775,9831
chr9:130920026-130920496	chr9	+	130920139	130920199	True	NR_027812,NM_024112,NM_005564	chr9,chr9,chr9	-,+,+	PTGES2,C9orf16,LCN2	-29427,2339,-8461
chr12:58149882-58151351	chr12	+	58149888	58151037	True	NM_000785,NM_138396,NM_000075	chr12,chr12,chr12	-,+,-	CYP27B1,MARCH9,CDK4	9993,-1039,-3724
chr18:5197804-5199280	chr18	+	5197959	5199086	True	NM_001145194,NR_015389	chr18,chr18	-,+	LOC642597,LOC339290	-704,39012
chr20:6028237-6029818	chr20	+	6028448	6029698	True	NM_001127458,NM_152611	chr20,chr20	+,-	CRLS1,LRRN4	-40601,5046
chr10:102821861-102822431	chr10	+	102821934	102822256	True	NM_024895,NM_030929	chr10,chr10	-,+	PDZD7,KAZALD1	-31020,-986
chr17:60501730-60503216	chr7	+	128117504	128117554	True	NM_183243,NM_018396	chr7,chr7	-,+	IMPDH1,METTL2B	-67468,-772
chr19:48893630-48893915	chr19	+	48893671	48893755	True	NM_006801,NM_000836	chr19,chr19	-,+	KDELR1,GRIN2D	1105,4376
chr15:95994615-95995365	chr15	+	95994617	95995293	True	NR_027133,NR_034095	chr15,chr15	+,-	LOC145820,LOC400456	-18346,-124288
chr2:10280692-10281099	chr2	+	10280691	10281005	True	NR_036222,NM_182626	chr2,chr2	-,+	MIR4261,C2orf48	51842,503
chr6:2902514-2902910	chr6	+	2902637	2902721	True	NR_026855,NM_004155	chr6,chr6	+,-	DKFZP686I15217,SERPINB9	85479,882
chr16:86597279-86597578	chr16	+	86597396	86597598	True	NM_001159380,NM_001159378,NM_001159379,NR_027490,NR_027489,NM_022764,NM_001159377,NM_005251,NR_026674	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	-,-,-,-,-,-,-,+,+	MTHFSD,MTHFSD,MTHFSD,MTHFSD,MTHFSD,MTHFSD,MTHFSD,FOXC2,FLJ30679	-8587,-8555,-8555,-8555,-8555,-8555,-8555,3258,-8526
chr2:37395463-37396929	chr2	+	37395639	37396527	True	NR_037879,NM_002759	chr2,chr2	+,-	LOC100505876,EIF2AK2	27107,-11449
chr10:50971739-50973629	chr10	+	50971824	50973225	True	NM_001143997,NM_001143996,NM_182554,NM_018245	chr10,chr10,chr10,chr10	-,-,+,-	OGDHL,OGDHL,C10orf53,OGDHL	-1399,-1399,-84191,-1399
chr5:36272837-36273194	chr5	+	36273054	36273241	True	NM_032637,NM_001161429	chr5,chr5	+,-	SKP2,RANBP3L	-120916,28829
chr5:14872846-14873368	chr5	+	14872854	14873344	True	NM_138348,NM_054027	chr5,chr5	+,-	FAM105B,ANKH	-208122,-967
chr14:50700140-50700351	chr14	+	50700164	50700341	True	NM_006939,NM_015684	chr14,chr14	-,+	SOS2,ATP5S	-2065,78705
chr1:226127797-226128438	chr1	+	226128038	226128388	True	NM_003240,NM_000120,NM_001172425	chr1,chr1,chr1	-,+,-	LEFTY2,EPHX1,LEFTY2	745,-115089,745
chr4:44365247-44366907	chr4	+	44365349	44366482	True	NM_198353,NM_021927	chr4,chr4	-,+	KCTD8,GUF1	84392,313950
chr17:11922429-11924010	chr17	+	11922738	11923928	True	NM_144680,NM_003010	chr17,chr17	-,+	ZNF18,MAP2K4	-22049,206
chr22:45406161-45406497	chr22	+	45406163	45406525	True	NM_007172,NM_138415,NM_001135862	chr22,chr22,chr22	+,-,-	NUP50,PHF21B,PHF21B	153200,-582,-354
chrX:84258462-84258703	chrX	+	84258469	84258721	True	NM_001012980,NM_198450	chrX,chrX	-,+	SATL1,APOOL	105303,176
chr17:7519976-7521918	chr17	+	7520312	7521965	True	NM_133491,NR_027463,NM_004860,NR_027462	chr17,chr17,chr17,chr17	-,+,-,+	SAT2,SHBG,FXR2,SHBG	9279,-2988,-2097,9321
chr22:23872308-23873259	chr22	+	23872735	23873249	True	NM_153615,NM_020070	chr22,chr22	+,-	RGL4,IGLL1	159798,49296
chr19:36630215-36630482	chr19	+	36630286	36630404	True	NM_001003962,NM_001864,NM_001749	chr19,chr19,chr19	+,-,+	CAPNS1,COX7A1,CAPNS1	513,13417,513
chr11:66055102-66055534	chr11	+	66055108	66055498	True	NM_020470,NM_153266,NM_182553	chr11,chr11,chr11	-,+,+	YIF1A,TMEM151A,CNIH2	1190,3874,-9463
chr1:51696065-51697967	chr1	+	51696203	51697820	True	NM_001080494,NM_014372	chr1,chr1	-,+	TTC39A,RNF11	90169,4124
chr1:36790222-36790925	chr1	+	36790340	36790976	True	NM_024676,NM_018166	chr1,chr1	+,-	SH3D21,FAM176B	-17683,-585
chr5:150829915-150830879	chr5	+	150830034	150830618	True	NM_078483,NM_181776	chr5,chr5	+,-	SLC36A1,SLC36A2	-2922,-102883
chr21:15588683-15589295	chr21	+	15588907	15589249	True	NM_144770,NM_198996	chr21,chr21	+,-	RBM11,LIPI	-492,-9653
chrX:101519730-101520303	chrX	+	101519824	101519906	True	NM_001012978,NM_022053	chrX,chrX	-,+	BEX5,NXF2	-108838,-17715
chrX:101519730-101520303	chrX	-	101677133	101677215	False	NR_002216,NM_022053	chrX,chrX	+,-	NXF4,NXF2	127677,17698
chrX:118889027-118889404	chrX	+	118889042	118889296	True	NM_001105576,NR_002584	chrX,chrX	+,-	ANKRD58,SNORA69	3279,32209
chr12:122230625-122230942	chr12	+	122230656	122230896	True	NM_015048,NM_019034	chr12,chr12	+,-	SETD1B,RHOF	11741,748
chr6:24652017-24653520	chr6	+	24652656	24653552	True	NM_001160094,NM_001168374,NM_001168375,NM_001168376,NM_014809,NM_001168377	chr6,chr6,chr6,chr6,chr6,chr6	+,-,-,-,-,-	ACOT13,KIAA0319,KIAA0319,KIAA0319,KIAA0319,KIAA0319	13710,-6273,-6407,-6407,-6273,-6273
chrY:1338438-1338720	chrY	+	1338615	1338717	True	NM_172249,NM_001161529,NM_006140,NM_001161532,NM_022148,NM_172246,NM_172245,NR_027760,NM_001161531	chrY,chrY,chrY,chrY,chrY,chrY,chrY,chrY,chrY	+,+,+,+,-,+,+,+,+	CSF2RA,CSF2RA,CSF2RA,CSF2RA,CRLF2,CSF2RA,CSF2RA,CSF2RA,CSF2RA	-973,-973,-973,-973,-57085,-973,-973,-973,-973
chrY:1338438-1338720	chrX	+	1388615	1388717	False	NM_172249,NM_001161529,NM_006140,NM_001161532,NM_022148,NM_172246,NM_172245,NR_027760,NM_001161531	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,-,+,+,+,+	CSF2RA,CSF2RA,CSF2RA,CSF2RA,CRLF2,CSF2RA,CSF2RA,CSF2RA,CSF2RA	-973,-973,-973,-973,-57085,-973,-973,-973,-973
chr6:34857588-34857959	chr6	+	34857646	34857874	True	NM_005643,NM_015245	chr6,chr6	-,+	TAF11,ANKS1A	-1827,-659
chr8:24300371-24301342	chr8	+	24300432	24301146	True	NM_003817,NM_006158	chr8,chr8	+,-	ADAM7,NEFL	-1981,513035
chr19:30870240-30871341	chr19	+	30870262	30871270	True	NM_014717,NM_031448	chr19,chr19	+,-	ZNF536,C19orf12	-6985,-663810
chr11:62529191-62530446	chr11	+	62529247	62530462	True	NM_002696,NM_006473,NM_024784	chr11,chr11,chr11	+,+,-	POLR2G,TAF6L,ZBTB3	-287,8412,-7591
chr16:69221766-69221989	chr16	+	69221771	69222013	True	NM_006750,NR_033227	chr16,chr16	+,-	SNTB2,CHTF8	-773,-55278
chr17:7211922-7212210	chr17	+	7212004	7212240	True	NM_001970,NM_001143761,NM_001143762,NM_001143760,NM_004489	chr17,chr17,chr17,chr17,chr17	+,+,+,+,-	EIF5A,EIF5A,EIF5A,EIF5A,GPS2	-1199,-767,-361,-1737,6468
chr18:43685706-43685999	chr18	+	43685901	43686047	True	NR_026978,NM_138443,NM_004046,NM_001001937	chr18,chr18,chr18,chr18	+,+,-,-	HAUS1,HAUS1,ATP5A1,ATP5A1	-1664,-1664,-7614,-1702
chr9:117564824-117565435	chr9	+	117564905	117565343	True	NM_153045,NM_005118	chr9,chr9	+,-	C9orf91,TNFSF15	-191250,3115
chr5:133704575-133706137	chr5	+	133704767	133706146	True	NM_016508,NM_003337,NM_001113575	chr5,chr5,chr5	-,+,-	CDKL3,UBE2B,CDKL3	-2002,723,-2002
chr3:135915360-135915628	chr3	+	135915364	135915574	True	NM_000532,NM_001145417,NM_018133	chr3,chr3,chr3	+,-,-	PCCB,MSL2,MSL2	53592,-2054,-676
chr19:58545693-58545930	chr19	+	58545867	58545959	True	NM_182572,NM_025027	chr19,chr19	+,-	ZSCAN1,ZNF606	-484,-31153
chr19:45503189-45503956	chr19	+	45503490	45503782	True	NM_145288,NM_006509	chr19,chr19	-,+	ZNF296,RELB	75956,924
chr16:22554718-22556023	chr16	+	22555729	22555963	True	NR_003676,NR_027460	chr16,chr16	+,-	LOC653786,RRN3P3	1055,-106693
chr16:22554718-22556023	chr16	+	22510437	22513363	False	NM_001135865,NR_027460	chr16,chr16	+,-	LOC100132247,RRN3P3	11480,-61401
chr16:22554718-22556023	chr16	-	21448181	21451107	False	NR_024456,NR_026675	chr16,chr16	-,+	LOC100190986,NCRNA00169	-2405,-138934
chr16:22554718-22556023	chr16	-	21880449	21883375	False	NM_003366,NR_003370	chr16,chr16	+,-	UQCRC2,RRN3P1	81233,-49954
chr16:22554718-22556023	chr16	-	30268621	30271550	False	NR_002555,NM_177552	chr16,chr16	-,+	LOC613037,SULT1A3	-11689,-60994
chr16:22554718-22556023	chr16	-	29426842	29429772	False	NM_001031827,NR_002454	chr16,chr16	-,+	BOLA2,LOC606724	39437,30893
chr16:22554718-22556023	chr16	-	29528637	29531566	False	NM_177552,NR_002473	chr16,chr16	+,-	SULT1A3,LOC440354	-60354,48898
chr1:1409863-1410493	chr1	+	1410171	1410371	True	NR_026871,NM_031921	chr1,chr1	-,+	LOC441869,ATAD3B	-53521,-3058
chr1:1409863-1410493	chr1	+	1448604	1448720	False	NM_001170536,NM_001170535,NM_018188,NM_001114748	chr1,chr1,chr1,chr1	+,+,+,-	ATAD3A,ATAD3A,ATAD3A,C1orf70	-745,-1132,-1132,27070
chr7:137486842-137487476	chr7	+	137487059	137487500	True	NM_004717,NM_001190906	chr7,chr7	-,+	DGKI,AKR1D1	44159,273677
chr5:159845752-159846096	chr5	+	159845759	159846135	True	NM_006425,NM_004219	chr5,chr5	-,+	SLU7,PTTG1	83,2729
chr4:149366358-149366604	chr4	+	149366429	149366653	True	NM_001166104,NM_000901,NM_024605	chr4,chr4,chr4	-,-,+	NR3C2,NR3C2,ARHGAP10	-2757,-2757,-713027
chr15:49302514-49302748	chr15	+	49302514	49302642	True	NM_014335,NM_001193489	chr15,chr15	+,-	EID1,SECISBP2L	-132283,36172
chr14:103995998-103996428	chr14	+	103996048	103996466	True	NM_152307,NM_001823	chr14,chr14	+,-	TRMT61A,CKB	-590,-6878
chr4:186123903-186124237	chr4	+	186123943	186124206	True	NM_020827,NM_031953	chr4,chr4	-,+	KIAA1430,SNX25	1031,7077
chr17:79990855-79991281	chr17	+	79991040	79991330	True	NM_016286,NM_005052,NM_001195218,NM_144999	chr17,chr17,chr17,chr17	-,+,-,+	DCXR,RAC3,DCXR,LRRC45	4293,-1559,4293,-9811
chr1:162824411-162824683	chr1	+	162824495	162824729	True	NM_178550,NM_016371	chr1,chr1	-,+	C1orf110,HSD17B7	13926,-64060
chr17:33288081-33288361	chr17	+	33288154	33288324	True	NM_052857,NM_006584,NM_001193530,NM_001193529	chr17,chr17,chr17,chr17	+,-,-,-	ZNF830,CCT6B,CCT6B,CCT6B	224,254,254,254
chr19:56152972-56153381	chr19	+	56153188	56153254	True	NM_016535,NM_016202,NM_013301,NM_001163423,NM_203374,NM_207115	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,-,+	ZNF581,ZNF580,CCDC106,ZNF580,ZNF784,ZNF580	1731,163,5699,208,-17247,-847
chr4:87837075-87837544	chr4	+	87837234	87837598	True	NM_144645,NM_001166693	chr4,chr4	-,+	C4orf36,AFF1	-23659,18555
chr5:137776081-137776480	chr5	+	137776315	137776457	True	NM_004730,NM_016606	chr5,chr5	-,+	ETF1,REEP2	102525,-1590
chr1:40420839-40421042	chr1	+	40420842	40421060	True	NM_005376,NM_001136493,NM_032793	chr1,chr1,chr1	-,+,+	MYCL1,MFSD2A,MFSD2A	-53155,-109,-109
chr17:62086373-62087497	chr17	+	62086395	62087166	True	NM_000873,NM_001191031	chr17,chr17	-,+	ICAM2,C17orf72	-2112,-10738
chr3:49225835-49226390	chr3	+	49225971	49226221	True	NM_001080528,NM_178173	chr3,chr3	-,+	LOC646498,CCDC36	3128,9639
chr17:53046349-53046833	chr17	+	53046415	53046875	True	NM_001162862,NM_001162861,NM_178509,NR_027941,NR_027942,NM_004375	chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,-,-,-	COX11,COX11,STXBP4,COX11,COX11,COX11	-351,-351,-340,-351,-351,-351
chr19:37662522-37663608	chr19	+	37663014	37663583	True	NM_152655,NM_152604,NM_199126	chr19,chr19,chr19	-,+,-	ZNF585A,ZNF383,ZNF585A	91,53782,-27
chr21:11098000-11098623	chr21	+	11098036	11098572	True	NR_037458,NM_181704,NM_001187,NM_182482,NM_182481,NM_182484	chr21,chr21,chr21,chr21,chr21,chr21	+,-,-,-,-,-	MIR3687,BAGE4,BAGE,BAGE2,BAGE3,BAGE5	-1271884,403,415,403,403,403
chr12:77155884-77157160	chr12	+	77156092	77156947	True	NM_001321,NM_015336	chr12,chr12	-,+	CSRP2,ZDHHC17	115902,906
chr4:821065-821390	chr4	+	821378	821438	True	NM_032326,NM_006651	chr4,chr4	+,-	TMEM175,CPLX1	104823,-1433
chr10:112638757-112639333	chr10	+	112638869	112639083	True	NM_014456,NR_026932,NM_145341,NM_001199492	chr10,chr10,chr10,chr10	+,-,+,+	PDCD4,LOC282997,PDCD4,PDCD4	-7373,-8207,-7373,-7373
chr10:6441397-6442158	chr10	+	6441468	6442128	True	NR_036502,NM_006257	chr10,chr10	+,-	LOC439949,PRKCQ	180258,180160
chr22:37501403-37502602	chr22	+	37501587	37502602	True	NM_024681,NM_153609	chr22,chr22	+,-	KCTD17,TMPRSS6	-53859,-1894
chrX:138635893-138636289	chrX	+	138636016	138636311	True	NM_000133,NM_001171877	chrX,chrX	+,-	F9,MCF2	-23184,88740
chr9:65598109-65599672	chr9	+	65598283	65599541	True	NR_024496,NM_015667	chr9,chr9	+,-	LOC442421,FAM75A7	894727,-88673
chr9:65598109-65599672	chr9	+	43856711	43857969	False	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	-225981,-171890
chr13:29599510-29599894	chr13	+	29599540	29599936	True	NM_181785,NM_001033602	chr13,chr13	-,+	SLC46A3,MTUS2	-306390,-843
chr6:10823612-10823921	chr6	+	10823678	10823770	True	NM_001040274,NM_005906	chr6,chr6	+,-	SYCP2L,MAK	63293,7400
chrX:129299290-129299531	chrX	+	129299352	129299438	True	NM_001130847,NM_004794,NM_004208,NM_145812,NM_145813	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	AIFM1,RAB33A,AIFM1,AIFM1,AIFM1	473,6334,473,473,473
chr16:67593758-67594565	chr16	+	67594057	67594476	True	NM_001191022,NM_001138,NM_006565	chr16,chr16,chr16	+,-,+	CTCF,AGRP,CTCF	1833,-76341,1833
chr10:26225418-26226027	chr10	+	26225520	26225977	True	NM_017433,NR_027333	chr10,chr10	+,-	MYO3A,LOC100128811	-2577,-760315
chr19:4831843-4832202	chr19	+	4831857	4832071	True	NM_182919,NM_018708	chr19,chr19	-,+	TICAM1,FEM1A	-120,-40180
chr17:16948559-16948760	chr17	+	16948668	16948782	True	NM_015134,NM_201274,NM_012452	chr17,chr17,chr17	+,+,-	MPRIP,MPRIP,TNFRSF13B	-2612,-2612,-73266
chr19:1102440-1103020	chr19	+	1102555	1103003	True	NM_001039847,NM_002085,NM_002695,NM_001039848	chr19,chr19,chr19,chr19	+,+,-,+	GPX4,GPX4,POLR2E,GPX4	932,932,-7164,1645
chr1:25938512-25939829	chr1	+	25938560	25939868	True	NM_020379,NM_138618	chr1,chr1	+,-	MAN1C1,RHCE	4090,-191197
chr20:43886201-43886703	chr20	+	43886337	43886741	True	NM_003064,NM_003008	chr20,chr20	-,+	SLPI,SEMG2	-3131,-36386
chr2:113935510-113937222	chr2	+	113936051	113937193	True	NM_012455,NM_003466	chr2,chr2	+,-	PSD4,PAX8	-4542,99355
chr11:108409839-108410972	chr11	+	108409998	108410678	True	NM_153705,NM_004398	chr11,chr11	-,+	KDELC2,DDX10	-40839,125137
chr12:105475895-105476508	chr12	+	105475989	105476480	True	NR_027752,NM_001034173,NM_015275	chr12,chr12,chr12	-,-,+	ALDH1L2,ALDH1L2,KIAA1033	1916,1916,25011
chr15:72104604-72104841	chr15	+	72104657	72104815	True	NM_014249,NM_016346,NM_006901	chr15,chr15,chr15	+,+,-	NR2E3,NR2E3,MYO9A	-1814,-1814,305657
chr3:3220747-3220984	chr3	+	3220780	3221008	True	NM_001173482,NM_016302,NM_182916	chr3,chr3,chr3	-,-,+	CRBN,CRBN,TRNT1	443,443,-52242
chr14:105189965-105190240	chr14	+	105189996	105190218	True	NM_199165,NM_005163,NM_152328	chr14,chr14,chr14	+,-,+	ADSSL1,AKT1,ADSSL1	6009,69770,315
chr15:78286546-78287038	chr15	+	78286556	78286983	True	NM_001101404,NR_026998	chr15,chr15	+,-	SH2D7,LOC91450	97943,3
chr3:131081175-131082444	chr3	+	131081416	131082468	True	NR_002949,NR_002985,NR_027766	chr3,chr3,chr3	+,-,+	NUDT16P1,SNORA58,NUDT16P1	-778,115661,-749
chr17:78517149-78517981	chr17	+	78517588	78517906	True	NM_002522,NM_020761,NM_001163034	chr17,chr17,chr17	-,+,+	NPTX1,RPTOR,RPTOR	-67184,718,718
chr1:3666740-3667831	chr1	+	3666739	3667515	True	NR_033709,NR_033708,NR_033710,NR_033711,NR_033712,NM_152492	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,+	KIAA0495,KIAA0495,KIAA0495,KIAA0495,KIAA0495,CCDC27	-2802,-2802,-2802,-2802,-3404,1449
chr13:96337611-96338374	chr13	+	96337789	96338054	True	NM_006260,NM_198968	chr13,chr13	+,-	DNAJC3,DZIP1	-8456,-40832
chr3:32826656-32827298	chr3	+	32827120	32827314	True	NM_016141,NM_001039111	chr3,chr3	-,+	DYNC1LI1,TRIM71	-214754,32195
chr11:57423146-57423388	chr11	+	57423170	57423269	True	NM_145008,NM_006831,NM_001142597	chr11,chr11,chr11	-,+,+	YPEL4,CLP1,CLP1	-5753,1946,1946
chr11:30605745-30605968	chr11	+	30605920	30605982	True	NM_001145399,NM_001584,NM_152316	chr11,chr11,chr11	-,-,+	MPPED2,MPPED2,C11orf46	1998,-3880,-261322
chr7:30811071-30811321	chr7	+	30811097	30811301	True	NM_032222,NM_001202481	chr7,chr7	+,-	FAM188B,CRHR2	-115,-71378
chr6:26034143-26034372	chr6	+	26034142	26034232	True	NM_003537,NM_003531,NM_003544,NM_021062,NM_003513	chr6,chr6,chr6,chr6,chr6	-,+,-,-,-	HIST1H3B,HIST1H3C,HIST1H4B,HIST1H2BB,HIST1H2AB	-1854,11406,-6662,9705,-346
chr1:207822554-207824423	chr1	+	207822872	207824472	True	NM_175710,NR_029832	chr1,chr1	+,-	CR1L,MIR29C	-4466,150862
chr7:137768803-137769123	chr7	+	137768807	137768942	True	NM_005989,NM_194071,NM_001190906,NM_001190907	chr7,chr7,chr7,chr7	+,-,+,+	AKR1D1,CREB3L2,AKR1D1,AKR1D1	-7680,-81961,-7680,-7680
chr1:247725182-247726232	chr1	+	247725272	247726088	True	NM_198074,NM_145278	chr1,chr1	-,+	OR2C3,C1orf150	-28131,-12872
chr15:101819805-101820660	chr15	+	101819804	101820652	True	NM_024652,NM_018445,NM_203472	chr15,chr15,chr15	+,-,-	LRRK1,SELS,SELS	-360405,-2104,-2104
chr12:116710703-116710963	chr12	+	116710733	116710801	True	NR_027345,NM_015335	chr12,chr12	+,-	NCRNA00173,MED13L	260425,4246
chr12:88974021-88974248	chr12	+	88974045	88974177	True	NM_003994,NM_000899,NM_181783	chr12,chr12,chr12	-,-,+	KITLG,KITLG,TMTC3	123,123,-438023
chr3:26685337-26687114	chr3	+	26685474	26687149	True	NM_052953,NM_199347	chr3,chr3	+,-	LRRC3B,NEK10	-21235,723813
chrX:134976314-134977017	chrX	+	134976916	134977004	True	NM_001017438,NM_018666	chrX,chrX	-,+	CT45A6,SAGE1	-5672,-1195
chr17:46115428-46115675	chr17	+	46115494	46115688	True	NM_003204,NR_029687,NM_016429	chr17,chr17,chr17	+,-,-	NFE2L1,MIR152,COPZ2	9997,-881,-342
chr2:135674836-135675354	chr2	+	135674900	135675404	True	NM_058241,NM_001241,NR_037649,NR_036549	chr2,chr2,chr2,chr2	+,+,+,-	CCNT2,CCNT2,CCNT2,LOC100129961	987,987,987,824
chr16:1586307-1587288	chr16	+	1586436	1587334	True	NM_001013658,NM_024600	chr16,chr16	-,+	PTX4,TMEM204	-47968,-2256
chr2:122043072-122044085	chr2	+	122043092	122044010	True	NR_023343,NM_014553	chr2,chr2	+,-	RNU4ATAC,TFCP2L1	244445,-314
chr3:187868207-187869145	chr3	+	187868375	187869066	True	NR_036497,NM_001167672	chr3,chr3	-,+	LOC339929,LPP	2861,2596
chr11:64890350-64891060	chr11	+	64890470	64890895	True	NR_037567,NM_001997,NM_004927,NM_014205,NR_037568	chr11,chr11,chr11,chr11,chr11	+,-,+,-,+	MRPL49,FAU,MRPL49,ZNHIT2,MRPL49	-866,-798,-805,-5300,-805
chr22:27054150-27054650	chr22	+	27054187	27054479	True	NR_033321,NR_003491,NR_033320,NM_001887,NR_033319	chr22,chr22,chr22,chr22,chr22	+,+,+,-,+	MIAT,MIAT,MIAT,CRYBB1,MIAT	-792,-792,-792,-40196,-792
chr5:10306468-10307020	chr5	+	10306611	10306939	True	NM_005885,NM_138809	chr5,chr5	+,-	MARCH6,CMBL	46888,1279
chr19:11886303-11887714	chr19	+	11886731	11887623	True	NM_152355,NM_001080493	chr19,chr19	+,-	ZNF441,ZNF823	-8967,-36971
chr14:64802613-64804575	chr14	+	64803317	64804574	True	NM_005956,NR_033777,NM_001040276	chr14,chr14,chr14	+,-,-	MTHFD1,TEX21P,ESR2	50184,9805,744
chr16:69169854-69170289	chr16	+	69169955	69170154	True	NM_001039690,NR_033227,NM_001040146,NM_032830	chr16,chr16,chr16,chr16	-,-,-,+	CHTF8,CHTF8,CHTF8,CIRH1A	-3462,-3462,-3893,-3514
chr19:39321518-39321986	chr19	+	39321613	39322003	True	NM_001398,NM_001042507	chr19,chr19	-,+	ECH1,LGALS7B	544,-41814
chr11:124606548-124607232	chr11	+	124606553	124607227	True	NM_001126181,NM_006176,NM_014312	chr11,chr11,chr11	+,+,-	NRGN,NRGN,VSIG2	2601,2601,14932
chr20:62601883-62602926	chr20	+	62601924	62602670	True	NM_080621,NM_012469,NM_020713	chr20,chr20,chr20	-,+,-	SAMD10,PRPF6,ZNF512B	8379,9760,-706
chr15:23931009-23931569	chr15	+	23931114	23931560	True	NM_005664,NM_002487	chr15,chr15	+,-	MKRN3,NDN	-120720,940
chr3:45835965-45837190	chr3	+	45836222	45837134	True	NM_006641,NM_020208,NM_022405	chr3,chr3,chr3	+,-,-	CCR9,SLC6A20,SLC6A20	90861,951,951
chrX:100647992-100649867	chrX	+	100648562	100649681	True	NM_000061,NM_021029,NM_001199974,NM_001199972,NM_001199973	chrX,chrX,chrX,chrX,chrX	-,+,+,+,+	BTK,RPL36A,RPL36A-HNRNPH2,RPL36A,RPL36A-HNRNPH2	-7350,-2746,-2746,-2746,-2746
chr1:165323181-165323457	chr1	+	165323214	165323396	True	NM_177398,NM_001174069,NM_001005214	chr1,chr1,chr1	-,-,+	LMX1A,LMX1A,LRRC52	2607,2133,190081
chr16:64294041-64294714	chr16	+	64294163	64294749	True	NM_001795,NM_001797	chr16,chr16	+,-	CDH5,CDH11	2105775,861227
chr8:22101196-22101571	chr8	+	22101314	22101382	True	NM_001722,NR_029714	chr8,chr8	+,-	POLR3D,MIR320A	1236,1224
chr7:91787184-91789026	chr7	+	91787361	91788934	True	NM_001161528,NM_019004	chr7,chr7	-,+	LOC401387,ANKIB1	5715,86613
chr2:219434150-219434788	chr2	+	219434197	219434837	True	NM_020935,NM_005444	chr2,chr2	-,+	USP37,RQCD1	-1113,-571
chr1:111965652-111966188	chr1	+	111965811	111966203	True	NM_001688,NM_002557	chr1,chr1	+,-	ATP5F1,OVGP1	25539,4246
chr22:46480507-46480930	chr22	+	46480543	46480951	True	NR_037413,NM_018280,NR_027033	chr22,chr22,chr22	+,-,+	MIR3619,C22orf26,LOC400931	5972,-30519,925
chr11:130031939-130032792	chr11	+	130032030	130032698	True	NM_014155,NM_021978	chr11,chr11	-,+	ZBTB44,ST14	151959,-2399
chr19:10960657-10960962	chr19	+	10960747	10960971	True	NM_001136482,NM_006858	chr19,chr19	+,-	C19orf38,TMED1	-1692,-13764
chr17:8868284-8868660	chr17	+	8868360	8868676	True	NM_004822,NM_001142633	chr17,chr17	+,-	NTN1,PIK3R5	56182,398
chr11:70242302-70243044	chr11	+	70242890	70243067	True	NM_133266,NM_138565,NM_005231,NM_001184740	chr11,chr11,chr11,chr11	-,+,+,+	SHANK2,CTTN,CTTN,CTTN	264906,1544,1544,1544
chr1:117210815-117211691	chr1	+	117210892	117211602	True	NR_031564,NM_001007237,NM_001542	chr1,chr1,chr1	+,-,-	MIR320B1,IGSF3,IGSF3	2768,-578,-578
chr3:167467660-167467941	chr3	+	167467661	167467964	True	NM_145859,NM_005025	chr3,chr3	-,+	PDCD10,SERPINI1	-15010,-14201
chr5:139682424-139682735	chr5	+	139682464	139682784	True	NM_031467,NM_002622	chr5,chr5	+,-	SLC4A9,PFDN1	57002,33
chr9:115247798-115248154	chr9	+	115247826	115248198	True	NR_036085,NM_133465	chr9,chr9	-,+	MIR3134,KIAA1958	-135281,1049
chr22:36784430-36785295	chr22	+	36784499	36785301	True	NM_145343,NM_002473	chr22,chr22	+,-	APOL1,MYH9	-135436,-436
chrY:1350808-1352551	chrY	+	1351251	1351943	True	NM_022148,NM_172247,NM_001161530	chrY,chrY,chrY	-,+,+	CRLF2,CSF2RA,CSF2RA	-69721,-131,-131
chrY:1350808-1352551	chrX	+	1401251	1401943	False	NM_022148,NM_172247,NM_001161530	chrX,chrX,chrX	-,+,+	CRLF2,CSF2RA,CSF2RA	-69721,-131,-131
chr12:124088440-124088809	chr12	+	124088632	124088818	True	NM_001414,NM_020936	chr12,chr12	-,+	EIF2B1,DDX55	29555,-2011
chr19:45928332-45929359	chr19	+	45928576	45929201	True	NM_001166049,NM_202001,NM_012099,NM_001983	chr19,chr19,chr19,chr19	-,-,+,-	ERCC1,ERCC1,CD3EAP,ERCC1	-1399,-1756,-19160,-1399
chr3:36949455-36949903	chr3	+	36949512	36949920	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	36678,84920
chr12:122034343-122034669	chr12	+	122034348	122034495	True	NM_032590,NM_032790	chr12,chr12	-,+	KDM2B,ORAI1	-15428,29959
chr10:125752097-125752857	chr10	+	125752135	125752200	True	NM_153442,NM_015892	chr10,chr10	+,-	GPR26,CHST15	-326315,99785
chr6:132834346-132834912	chr6	+	132834400	132834955	True	NM_003569,NM_175057	chr6,chr6	-,+	STX7,TAAR9	-63,24471
chr9:116634051-116634359	chr9	+	116634116	116634188	True	NM_133374,NM_001633	chr9,chr9	+,-	ZNF618,AMBP	4373,206622
chr7:36427115-36428561	chr7	+	36427147	36428468	True	NM_018685,NM_001100425	chr7,chr7	+,-	ANLN,KIAA0895	963,1316
chr18:75703024-75703915	chr18	+	75703074	75703830	True	NM_001480,NM_001025100	chr18,chr18	+,-	GALR1,MBP	-741117,-858300
chr2:111183799-111184062	chr2	+	111183804	111184033	True	NR_037626,NR_037627,NR_027142,NR_027143	chr2,chr2,chr2,chr2	+,-,-,-	LOC100507334,LOC100288570,LOC440895,LOC440895	-180641,-2411,-2411,-2411
chr2:111183799-111184062	chr2	-	110702625	110702675	False	NR_037627,NR_036225,NR_027142,NR_027143	chr2,chr2,chr2,chr2	+,-,+,+	LOC100288570,MIR4267,LOC440895,LOC440895	2591,124994,2591,2591
chr2:111183799-111184062	chr2	-	111000710	111000802	False	NR_027063,NR_037626	chr2,chr2	-,+	NCRNA00116,LOC100507334	-20193,2412
chr6:14886521-14887875	chr6	+	14886677	14887821	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	358705,775518
chr3:132316518-132316805	chr3	+	132316686	132316857	True	NM_032169,NM_016557,NM_178445	chr3,chr3,chr3	-,+,+	ACAD11,CCRL1,CCRL1	62176,-654,2123
chr10:22605002-22605432	chr10	+	22605013	22605453	True	NM_001204062,NM_001199938,NM_012071,NM_005180	chr10,chr10,chr10,chr10	+,-,+,+	COMMD3-BMI1,EBLN1,COMMD3,BMI1	-44,-106101,-44,4685
chr16:90089639-90090573	chr16	+	90089785	90090100	True	NM_001042610,NM_001214,NR_023348	chr16,chr16,chr16	-,-,+	DBNDD1,C16orf3,GAS8	-3848,6260,-834
chr11:65031697-65032421	chr11	+	65031982	65032399	True	NM_002689,NM_001077241	chr11,chr11	+,-	POLA2,SLC25A45	-2601,117794
chr7:128548764-128549930	chr7	+	128548890	128549882	True	NM_199349,NM_001098629,NM_001135914	chr7,chr7,chr7	-,+,-	KCP,IRF5,KCP	941,28111,941
chr16:1361827-1362185	chr16	+	1361879	1362159	True	NM_194261,NM_194259,NM_001001410,NM_003345,NM_194260	chr16,chr16,chr16,chr16,chr16	+,+,-,+,+	UBE2I,UBE2I,C16orf42,UBE2I,UBE2I	-2750,-2292,39764,-2292,-2569
chr11:44589315-44590322	chr11	+	44589367	44589767	True	NM_021926,NM_002231,NM_001024844	chr11,chr11,chr11	-,+,+	ALX4,CD82,CD82	-257651,-2277,-2277
chr3:149767746-149768704	chr3	+	149767965	149768681	True	NM_053024,NR_036538	chr3,chr3	-,+	PFN2,LOC646903	-79224,-78951
chr20:44050132-44051132	chr20	+	44050140	44050859	True	NM_001184729,NM_001184728,NM_015937,NM_014477,NM_001184730	chr20,chr20,chr20,chr20,chr20	+,+,+,-,+	PIGT,PIGT,PIGT,TP53TG5,PIGT	-5484,-5484,-5484,-43183,-5484
chr5:140548670-140548967	chr5	+	140548840	140549000	True	NM_019120,NM_031947,NM_018940	chr5,chr5,chr5	+,-,+	PCDHB8,SLC25A2,PCDHB7	8429,134662,3242
chr19:18496079-18496930	chr19	+	18496224	18496682	True	NM_145256,NM_004864,NR_036156	chr19,chr19,chr19	-,+,+	LRRC25,GDF15,MIR3189	11783,285,689
chr14:105220912-105222390	chr14	+	105220947	105222352	True	NM_005163,NM_021709,NM_006427	chr14,chr14,chr14	-,+,+	AKT1,SIVA1,SIVA1	37637,-1528,-1528
chr9:73736138-73736594	chr9	+	73736187	73736545	True	NM_182505,NM_001007471	chr9,chr9	+,-	C9orf85,TRPM3	789877,19
chr15:64444703-64444913	chr15	+	64444787	64444853	True	NM_024798,NM_000942	chr15,chr15	+,-	SNX22,PPIB	-922,10551
chr17:61989927-61991131	chr17	+	61990054	61991144	True	NM_001318,NM_022579,NM_022581,NM_000515,NM_022560,NM_022580,NM_022562,NM_022561,NR_002947,NM_022559	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,-,-,-,+,-	CSHL1,CSHL1,CSHL1,GH1,GH1,CSHL1,GH1,GH1,TCAM1P,GH1	-1436,-1436,-1436,5104,5104,-1436,5104,5104,-55732,5104
chr12:112559666-112560187	chr12	+	112559735	112560179	True	NM_001143906,NM_024953,NM_006700	chr12,chr12,chr12	+,-,+	TRAFD1,NAA25,TRAFD1	3169,-13100,3169
chr12:91576625-91578130	chr12	+	91576728	91578147	True	NM_001920,NR_027932,NM_133507,NM_133506,NM_133505,NM_133504,NM_133503	chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,+,-,-,-,-,-	DCN,CLLU1,DCN,DCN,DCN,DCN,DCN	78,1237159,-4399,-4399,-4399,-4399,-3369
chr17:38936534-38936832	chr17	+	38936557	38936803	True	NM_181539,NM_181537,NM_001195387	chr17,chr17,chr17	-,-,+	KRT26,KRT27,TMEM99	-8146,2047,38540
chr12:53728749-53729482	chr12	+	53728966	53729389	True	NM_021640,NM_001173467,NM_152860	chr12,chr12,chr12	+,-,-	C12orf10,SP7,SP7	-35547,665,198
chr11:64056908-64057581	chr11	+	64056968	64057262	True	NM_020155,NM_001177358,NM_001170880,NM_004322,NM_001170881,NM_001170726,NM_033310,NM_032989	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,-,+,+,+,-	GPR137,GPR137,GPR137,BAD,GPR137,GPR137,KCNK4,BAD	-3437,-4736,-3437,-4792,-4734,-5208,1530,-4792
chr1:1168455-1168659	chr1	+	1168459	1168629	True	NM_080605,NM_016547,NM_016176	chr1,chr1,chr1	+,-,-	B3GALT6,SDF4,SDF4	-881,-1012,-1012
chr4:186127970-186129352	chr4	+	186128024	186128905	True	NM_020827,NM_031953	chr4,chr4	-,+	KIAA1430,SNX25	-2842,2378
chr6:43543982-43544612	chr6	+	43543987	43544583	True	NM_020750,NM_006502	chr6,chr6	-,+	XPO5,POLH	-175,-160
chr1:213032982-213033823	chr1	+	213033112	213033677	True	NM_014053,NR_027286,NR_027285	chr1,chr1,chr1	+,-,-	FLVCR1,NCRNA00292,NCRNA00292	-1573,-1632,-1632
chr20:32251682-32252035	chr20	+	32251691	32252051	True	NM_080825,NM_031231,NM_001024675	chr20,chr20,chr20	+,-,+	C20orf144,NECAB3,C20orf134	-1650,10263,2252
chr6:15078052-15079177	chr6	+	15078116	15078557	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	167969,584787
chr7:31748044-31748261	chr7	+	31748053	31748313	True	NM_001191057,NM_006658	chr7,chr7	-,+	PDE1C,C7orf16	362207,-21473
chrX:100806341-100806560	chrX	+	100806364	100806608	True	NM_001009584,NM_016608	chrX,chrX	-,+	ARMCX6,ARMCX1	66433,-901
chr10:184350-184957	chr10	+	184350	184692	True	NM_006624,NM_001164154,NM_001202465,NM_001202464,NM_001202466,NM_212479	chr10,chr10,chr10,chr10,chr10,chr10	+,-,+,+,+,+	ZMYND11,TUBB8,ZMYND11,ZMYND11,ZMYND11,ZMYND11	-3996,-88846,-3977,-2977,-3977,-3977
chr8:146229442-146230429	chr8	+	146229473	146230443	True	NR_002807,NR_026974	chr8,chr8	+,+	TMED10P1,C8orf77	-9277,-1331
chr13:67944139-67945550	chr13	+	67944150	67945412	True	NR_002717,NM_203487	chr13,chr13	+,-	ATXN8OS,PCDH9	2735932,-139682
chr6:32546826-32547165	chr6	+	32546829	32547067	True	NM_002124,NM_002122	chr6,chr6	-,+	HLA-DRB1,HLA-DQA1	10545,58115
chr3:71637330-71638267	chr3	+	71637394	71638157	True	NM_018971,NM_001012505,NM_032682	chr3,chr3,chr3	+,-,-	GPR27,FOXP1,FOXP1	165043,-4254,-4254
chr14:106936640-106936880	chr14	+	106936707	106936907	True	NR_002224	chr14	-	ADAM6	-498349
chr22:35648062-35649047	chr22	+	35648274	35648674	True	NM_001003681,NR_027780,NM_005368	chr22,chr22,chr22	+,+,-	HMGXB4,HMGXB4,MB	4770,4770,364760
chr21:44312286-44313109	chr21	+	44312416	44313124	True	NM_018669,NM_021075,NM_001001503	chr21,chr21,chr21	-,+,+	WDR4,NDUFV3,NDUFV3	-12738,253,253
chr11:17247082-17247786	chr11	+	17247256	17247658	True	NM_002645,NM_005013	chr11,chr11	-,+	PIK3C2A,NUCB2	-55902,50627
chr11:65382439-65382823	chr11	+	65382454	65382804	True	NM_032223,NM_002419	chr11,chr11	+,-	PCNXL3,MAP3K11	978,-734
chr3:87040487-87041983	chr3	+	87040657	87041861	True	NM_016206,NM_014043	chr3,chr3	-,+	VGLL3,CHMP2B	-400,234551
chr15:69122711-69124428	chr15	+	69122781	69123704	True	NR_031680,NM_006305	chr15,chr15	+,-	MIR548H4,ANP32A	-6535,-9520
chr1:1512070-1513490	chr1	+	1512308	1513418	True	NM_001170686,NM_014188	chr1,chr1	+,-	MIB2,SSU72	37376,-2046
chr20:55102864-55103511	chr20	+	55103283	55103416	True	NM_001012971,NM_080615,NM_001013646	chr20,chr20,chr20	+,-,+	C20orf106,GCNT7,C20orf107	-3549,-2302,4885
chr11:85375286-85375537	chr11	+	85375289	85375537	True	NR_028026,NR_028027,NR_028024,NR_028025,NM_032273,NM_001039618	chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,+,-	CREBZF,CREBZF,CREBZF,CREBZF,TMEM126A,CREBZF	695,695,695,695,-16377,695
chr12:68720666-68721583	chr12	+	68720676	68721566	True	NM_020128,NM_017440,NM_001205028,NM_001205029,NM_001010942	chr12,chr12,chr12,chr12,chr12	-,-,-,-,+	MDM1,MDM1,MDM1,MDM1,RAP1B	4645,4645,4645,4645,283085
chr1:48305458-48307275	chr1	+	48305743	48306965	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	155647,381391
chr5:49987414-49988598	chr5	+	49987413	49988476	True	NM_024615,NM_198449	chr5,chr5	+,-	PARP8,EMB	-24692,-250179
chr17:77004543-77004871	chr17	+	77004544	77004884	True	NM_001159772,NM_001159773,NM_138793,NM_030968	chr17,chr17,chr17,chr17	-,-,-,+	CANT1,CANT1,CANT1,C1QTNF1	1065,1065,1065,15366
chr3:129037133-129037924	chr3	+	129037269	129037939	True	NM_006026,NR_026991	chr3,chr3	-,+	H1FX,C3orf47	-2149,-2206
chr6:39198237-39199401	chr6	+	39198291	39199113	True	NM_003740,NM_002062	chr6,chr6	-,+	KCNK5,GLP1R	-1040,-181791
chr12:99024017-99025150	chr12	+	99024287	99024655	True	NM_201612,NM_001160	chr12,chr12	-,+	IKBIP,APAF1	13984,14422
chr3:57310712-57311516	chr3	+	57310714	57311556	True	NM_012096,NM_130387	chr3,chr3	+,-	APPL1,ASB14	-49000,1474
chr9:15553661-15554108	chr9	+	15553663	15553982	True	NM_173550,NM_033222	chr9,chr9	+,-	C9orf93,PSIP1	-617,-42660
chr20:25388192-25388562	chr20	+	25388261	25388519	True	NM_021067,NM_001042472	chr20,chr20	+,-	GINS1,ABHD12	11,-16643
chrY:9158053-9158939	chrY	+	9158145	9158635	True	NR_001547,NM_001164471	chrY,chrY	-,+	RBMY1A3P,TSPY4	1906,36816
chr14:70040017-70040292	chr14	+	70040062	70040332	True	NR_024630,NM_014734	chr14,chr14	-,+	C14orf162,KIAA0247	-2144,37977
chr16:77821941-77822648	chr16	+	77822058	77822330	True	NM_020927,NM_199355	chr16,chr16	+,-	VAT1L,ADAMTS18	152,-353047
chr3:38537379-38537729	chr3	+	38537529	38537605	True	NM_001145464,NM_005107,NR_028389	chr3,chr3,chr3	+,+,-	EXOG,EXOG,LOC100128640	157,157,-41218
chr13:51624324-51626038	chr13	+	51624537	51625983	True	NR_003923,NM_001142279	chr13,chr13	-,+	GUCY1B2,RNASEH2B	14360,-140774
chr5:149786781-149787787	chr5	+	149786845	149787807	True	NM_004355,NM_001025158,NM_001025159,NM_001195141	chr5,chr5,chr5,chr5	-,-,-,+	CD74,CD74,CD74,TCOF1	4566,4575,4566,-49694
chr19:51337376-51338730	chr19	+	51337382	51338728	True	NM_138564,NM_001030050,NM_138563,NM_017509	chr19,chr19,chr19,chr19	-,+,-,-	KLK15,KLK3,KLK15,KLK15	-2603,19442,-2603,-2603
chr10:135474516-135475654	chr10	+	135474730	135475232	True	NM_001127388,NM_001127389,NM_033178,NM_012147,NM_001127386,NM_001127387,NM_001164467,NM_001080998	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,+,+,-	DUX4L6,DUX4L5,DUX4,DUX2,DUX4L2,DUX4L7,DUX4L3,FRG2B	5138,5138,5136,5199,5135,5138,5138,-34431
chr1:11118212-11118472	chr1	+	11118211	11118295	True	NM_003132,NM_007375	chr1,chr1	-,+	SRM,TARDBP	1846,-45583
chr4:38869889-38870089	chr4	+	38869890	38870088	True	NM_006068,NM_138389,NR_030300,NR_033290	chr4,chr4,chr4,chr4	-,+,+,+	TLR6,FAM114A1,MIR574,FAM114A1	-11452,-587,-288,-587
chr6:47467623-47468191	chr6	+	47467817	47468238	True	NM_014452,NM_012120	chr6,chr6	-,+	TNFRSF21,CD2AP	-190137,-22351
chr8:77485505-77486470	chr8	+	77485595	77486419	True	NM_024721,NR_024360	chr8,chr8	+,-	ZFHX4,LOC100192378	107095,109149
chr14:24784957-24785258	chr14	+	24784967	24785207	True	NM_001164692,NM_019839,NM_181657,NM_001143919,NM_014430	chr14,chr14,chr14,chr14,chr14	+,+,+,+,-	LTB4R2,LTB4R2,LTB4R,LTB4R,CIDEB	-5661,-5661,-2705,-4313,-4391
chr4:113074813-113076044	chr4	+	113074826	113075808	True	NM_152400,NM_052864	chr4,chr4	+,-	C4orf32,TIFA	-8324,131314
chr17:4737551-4738175	chr17	+	4737550	4738014	True	NM_001024937,NM_182566,NM_170663,NM_153827,NM_015716	chr17,chr17,chr17,chr17,chr17	+,-,+,+,+	MINK1,VMO1,MINK1,MINK1,MINK1	-966,-47821,-966,-966,-966
chr5:475493-476067	chr5	+	475522	475930	True	NM_007277,NR_024158	chr5,chr5	+,-	EXOC3,LOC25845	-32239,-2442
chr16:89009689-89010098	chr16	+	89009716	89009986	True	NM_175931,NM_016209	chr16,chr16	-,+	CBFA2T3,TRAPPC2L	-2108,-86261
chr17:4899831-4900406	chr17	+	4899983	4900308	True	NM_001171168,NM_015099,NM_001167986,NM_001167987,NM_006612,NM_001167985,NM_001171167,NM_001171166,NM_213726	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,+,-,-,-,-	CAMTA2,CAMTA2,INCA1,INCA1,KIF1C,INCA1,CAMTA2,CAMTA2,INCA1	-9318,-9023,647,647,934,647,-9318,-9023,647
chr1:155295324-155296608	chr1	+	155295676	155296510	True	NM_001105205,NM_001105204,NM_014328,NM_001105203,NM_001039517	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	RUSC1,RUSC1,RUSC1,RUSC1,C1orf104	-1999,-5087,-1509,-5087,-1738
chr10:98114708-98115019	chr10	+	98114928	98115066	True	NM_033207,NM_001040102,NM_001040103,NM_004088	chr10,chr10,chr10,chr10	-,-,-,+	OPALIN,OPALIN,OPALIN,DNTT	4076,4076,4076,-50895
chr11:63451778-63452822	chr11	+	63452111	63452658	True	NM_201428,NM_201429,NM_006054,NM_015459,NM_201430	chr11,chr11,chr11,chr11,chr11	+,+,+,-,+	RTN3,RTN3,RTN3,ATL3,RTN3	-3253,-3253,-3253,-13028,-3253
chr10:28033431-28034042	chr10	+	28033744	28034040	True	NM_021252,NM_173576	chr10,chr10	+,-	RAB18,MKX	-240546,788
chr2:112812382-112812767	chr2	+	112812591	112812789	True	NM_022662,NM_032824	chr2,chr2	-,+	ANAPC1,TMEM87B	-170850,10
chr10:102134619-102135568	chr10	+	102134785	102135384	True	NM_016112,NR_026762	chr10,chr10	-,+	PKD2L1,NCRNA00263	-44542,-1507
chr3:196756806-196757081	chr3	+	196756868	196757032	True	NR_024388,NM_005929,NM_033316	chr3,chr3,chr3	+,-,-	LOC152217,MFI2,MFI2	-87425,-181,-182
chr7:134462456-134463803	chr7	+	134462527	134463685	True	NM_001628,NM_033138,NM_004342,NM_033157	chr7,chr7,chr7,chr7	-,+,+,+	AKR1B1,CALD1,CALD1,CALD1	-318639,478,478,478
chr8:121418716-121419807	chr8	+	121418717	121419636	True	NM_022045,NM_014078	chr8,chr8	+,-	MTBP,MRPL13	38029,38071
chr3:50395520-50395855	chr3	+	50395533	50395755	True	NM_007022,NM_007024,NM_006545	chr3,chr3,chr3	+,-,-	CYB561D2,TMEM115,NPRL2	-7287,1234,-7047
chr21:45626480-45626725	chr21	+	45626481	45626683	True	NM_198155,NM_015259	chr21,chr21	+,-	C21orf33,ICOSLG	-73045,34201
chr11:128853988-128855072	chr11	+	128854348	128854849	True	NM_000890,NM_014715	chr11,chr11	+,-	KCNJ5,ARHGAP32	-93098,39298
chr20:1184364-1185939	chr20	+	1184438	1185754	True	NM_018354,NM_001009612	chr20,chr20	-,+	C20orf46,C20orf202	-19321,-392
chr15:34394238-34394778	chr15	+	34394352	34394798	True	NM_152595,NM_020154	chr15,chr15	+,-	PGBD4,C15orf24	-129,-299
chr12:105723479-105724279	chr12	+	105723478	105724136	True	NM_018171,NM_001145199	chr12,chr12	-,+	APPL2,C12orf75	-93470,277
chr11:4233479-4234378	chr11	+	4233509	4234389	True	NM_001005161,NM_001033	chr11,chr11	-,+	OR52B4,RRM1	155280,-117636
chr15:52960067-52961194	chr15	+	52960130	52961038	True	NM_002748,NM_019600	chr15,chr15	+,-	MAPK6,KIAA1370	-648776,9836
chr7:150078330-150079012	chr7	+	150078407	150078867	True	NM_173680,NM_002889	chr7,chr7	+,-	ZNF775,RARRES2	-2052,-39644
chr5:52857924-52858779	chr5	+	52858078	52858768	True	NR_030307,NM_002495	chr5,chr5	-,+	MIR581,NDUFS4	388711,-1665
chr22:44576786-44577271	chr22	+	44576793	44577157	True	NR_024426,NR_024427,NM_022141,NM_001099294,NM_001137605,NM_001137606,NR_024428	chr22,chr22,chr22,chr22,chr22,chr22,chr22	+,+,+,-,+,+,+	PARVG,PARVG,PARVG,KIAA1644,PARVG,PARVG,PARVG	-74,-8008,-74,131624,-8008,99,58
chr9:116038507-116038773	chr9	+	116038507	116038805	True	NM_139286,NM_004697	chr9,chr9	-,+	CDC26,PRPF4	-638,-589
chr1:33723759-33724195	chr1	+	33723761	33724125	True	NR_037400,NM_152493	chr1,chr1	-,+	MIR3605,ZNF362	74018,-1638
chr1:46976316-46976623	chr1	+	46976319	46976663	True	NM_147192,NM_001097611,NM_172225	chr1,chr1,chr1	+,-,+	DMBX1,KNCN,DMBX1	-3702,40274,-3702
chr7:100026013-100026271	chr7	+	100026012	100026212	True	NM_001194992,NM_001194991,NM_001194990,NM_019606,NM_017984,NM_145030	chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,-,-	MEPCE,MEPCE,MEPCE,MEPCE,ZCWPW1,C7orf47	200,200,200,1041,140,7932
chr6:155055466-155055978	chr6	+	155055522	155055976	True	NM_173515,NM_014892	chr6,chr6	-,+	CNKSR3,SCAF8	-223769,-1064
chr19:39137733-39137981	chr19	+	39137837	39138009	True	NM_004924,NM_007181	chr19,chr19	+,-	ACTN4,MAP4K1	257,-29194
chr9:974717-975073	chr9	+	974734	975118	True	NM_021240,NM_152569	chr9,chr9	+,-	DMRT3,C9orf66	1845,-758841
chr19:5623572-5623984	chr19	+	5623616	5624021	True	NM_001201338,NM_001201339,NR_037699,NM_014649,NM_002967,NM_001201340	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,-,+,+	SAFB,SAFB,SAFB,SAFB2,SAFB,SAFB	-621,-621,-621,-678,-621,-621
chr2:208890643-208891329	chr2	+	208890655	208891172	True	NM_001080475,NM_001178000	chr2,chr2	-,+	PLEKHM3,PIKFYVE	-371,239818
chr2:198541396-198541729	chr2	+	198541512	198541752	True	NM_144629,NM_138395	chr2,chr2	-,+	RFTN2,MARS2	-928,28275
chr19:39926579-39927367	chr19	+	39926637	39927073	True	NM_001111020,NM_003169,NM_001130825,NM_001130824,NM_001020	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	SUPT5H,SUPT5H,SUPT5H,SUPT5H,RPS16	9112,9214,9112,9112,-19
chr3:63429142-63429826	chr3	+	63429195	63429871	True	NM_025075,NM_144642	chr3,chr3	-,+	THOC7,SYNPR	419776,-504
chr6:26107685-26108001	chr6	+	26107684	26108018	True	NM_003542,NM_005323	chr6,chr6	+,-	HIST1H4C,HIST1H1T	-3565,396
chr11:133900825-133901447	chr11	+	133900829	133901345	True	NM_014987,NR_027276	chr11,chr11	-,+	IGSF9B,LOC100128239	-73949,821
chr9:34456759-34457258	chr9	+	34456844	34457270	True	NM_001184941,NM_001184940,NM_001184943,NM_001184942,NM_001184945,NM_012144,NM_147202	chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,-,-,-,-,+,-	C9orf25,C9orf25,C9orf25,C9orf25,C9orf25,DNAI1,C9orf25	1348,1348,1348,1348,1348,1540,1348
chr1:154966091-154967333	chr1	+	154966234	154967290	True	NM_018655,NM_015872,NM_003029	chr1,chr1,chr1	+,+,-	LENEP,ZBTB7B,SHC1	-223,7821,-19275
chr9:132426813-132427036	chr9	+	132426995	132427067	True	NM_016307,NM_177999	chr9,chr9	+,-	PRRX2,ASB6	852,-22547
chr16:3165282-3165842	chr16	+	3165342	3165804	True	NM_001042428,NR_024167,NR_024166,NM_003456	chr16,chr16,chr16,chr16	+,-,-,+	ZNF205,MGC3771,MGC3771,ZNF205	-2830,75,75,-2830
chr14:61444754-61446224	chr14	+	61444762	61446262	True	NM_001172702,NM_020810,NM_153811,NR_033344	chr14,chr14,chr14,chr14	+,-,+,+	SLC38A6,TRMT5,SLC38A6,SLC38A6	1569,1570,1569,1702
chr12:69327447-69327930	chr12	+	69327541	69327815	True	NM_001005502,NM_198320,NM_002392	chr12,chr12,chr12	-,-,+	CPM,CPM,MDM2	-562,-562,-125628
chr15:78421552-78422767	chr15	+	78421665	78422479	True	NM_006383,NM_005530	chr15,chr15	-,+	CIB2,IDH3A	1449,19239
chr3:156393888-156395849	chr3	+	156393999	156395760	True	NM_001184718,NM_015508,NM_001184717,NR_027954	chr3,chr3,chr3,chr3	+,+,+,-	TIPARP,TIPARP,TIPARP,LOC100287227	39,-1845,-1335,-497
chr11:111748631-111749551	chr11	+	111748982	111749594	True	NM_138378,NM_001077690,NM_001077691,NM_001077692,NM_022761,NM_024740	chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,+,-	FDXACB1,ALG9,ALG9,ALG9,C11orf1,ALG9	609,-6677,-6978,-6978,353,-6677
chrX:134305112-134305566	chrX	+	134305118	134305612	True	NM_001031705,NM_017863,NM_001078171	chrX,chrX,chrX	-,-,+	CXorf48,CXorf48,FAM127A	189,189,-138836
chr4:1389532-1389826	chr4	+	1389537	1389802	True	NM_001328,NM_175918	chr4,chr4	-,+	CTBP1,CRIPAK	-146629,-4253
chr9:133453950-133454298	chr9	+	133453982	133454332	True	NR_027440,NM_003934	chr9,chr9	-,+	LOC100272217,FUBP3	599,627
chr6:154825644-154826722	chr6	+	154825817	154826621	True	NM_173515,NM_014892	chr6,chr6	-,+	CNKSR3,SCAF8	5188,227890
chr11:35164930-35165240	chr11	+	35164948	35165155	True	NM_001001390,NM_001001391,NM_001001392,NM_000610,NM_001202555,NM_001202557,NM_001202556,NM_015957,NM_001001389	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,+,+,-,+	CD44,CD44,CD44,CD44,CD44,CD44,CD44,APIP,CD44	-4583,-4583,-4583,-4583,-4583,-4583,-4583,-227009,-4583
chr22:50964100-50964321	chr22	+	50964152	50964240	True	NM_005138,NM_001953,NM_001169111,NM_001169110,NM_001014440,NM_152299,NM_001169109,NM_001113755,NM_001113756	chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,-,+,-,-,-	SCO2,TYMP,SCO2,SCO2,ODF3B,NCAPH2,SCO2,TYMP,TYMP	-118,4324,-119,384,6818,-17558,678,4324,4068
chrX:30327337-30327628	chrX	+	30327392	30327664	True	NM_177404,NM_000475	chrX,chrX	+,-	MAGEB1,NR0B1	-62172,-37
chr3:181431202-181432878	chr3	+	181431253	181432788	True	NR_033725,NM_003106	chr3,chr3	-,+	DNAJC19,SOX2	-723691,-1593
chr12:49213625-49214889	chr12	+	49213717	49214689	True	NM_004818,NM_000725,NM_020983	chr12,chr12,chr12	-,+,-	DDX23,CACNB3,ADCY6	31318,-1256,-30897
chr18:48355637-48357515	chr18	+	48355938	48357564	True	NM_001168335,NM_031939,NM_001127176,NM_001127175,NM_001127174	chr18,chr18,chr18,chr18,chr18	+,-,-,-,-	ME2,MRO,MRO,MRO,MRO	47867,-9504,-9504,-9504,-4184
chr2:201354880-201355164	chr2	+	201354986	201355176	True	NM_152387,NM_001160046	chr2,chr2	-,+	KCTD18,SGOL2	19666,35688
chr17:7806214-7806453	chr17	+	7806305	7806457	True	NR_003000,NR_024349	chr17,chr17	+,-	SCARNA21,LOC284023	2983,12858
chr1:225634679-225635148	chr1	+	225634988	225635140	True	NM_194442,NM_001130440	chr1,chr1	-,+	LBR,SRP9	-18431,330374
chr14:93672646-93673143	chr14	+	93672693	93673093	True	NM_001100417,NM_175748,NM_032490	chr14,chr14,chr14	+,+,-	UBR7,UBR7,C14orf142	307,307,417
chr3:172163058-172164226	chr3	+	172163119	172164242	True	NM_018098,NM_004122,NM_198407	chr3,chr3,chr3	+,-,-	ECT2,GHSR,GHSR	308055,2063,2063
chr6:109775274-109775915	chr6	+	109775349	109775865	True	NM_001159291,NM_022765,NM_003080	chr6,chr6,chr6	-,-,+	MICAL1,MICAL1,SMPD2	1375,1375,-13469
chr11:9684432-9684686	chr11	+	9684432	9684600	True	NR_033972,NM_015055	chr11,chr11	-,+	LOC440028,SWAP70	96540,1027
chr6:154355399-154356359	chr6	+	154355885	154356085	True	NM_001130699,NM_001145283,NM_001145282,NM_001145285,NM_000914,NM_001145286,NM_001008504,NM_001008505,NM_001008503,NM_001145284	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,+,+,+,+,+,+,+,+,+	IPCEF1,OPRM1,OPRM1,OPRM1,OPRM1,OPRM1,OPRM1,OPRM1,OPRM1,OPRM1	295182,4357,4357,4357,4357,4357,4357,4357,4357,4460
chr8:54928999-54929335	chr8	+	54929054	54929290	True	NM_201437,NM_014175,NM_006756	chr8,chr8,chr8	-,+,-	TCEA1,MRPL15,TCEA1	5768,118490,5768
chr8:65492050-65492419	chr8	+	65492090	65492456	True	NM_152414,NR_015374	chr8,chr8	+,-	BHLHE22,LOC401463	338,-2270
chr2:21266734-21266934	chr2	+	21266767	21266925	True	NM_182828,NM_000384	chr2,chr2	+,-	GDF7,APOB	-400394,70
chr1:161044759-161045280	chr1	+	161044797	161045160	True	NR_033385,NM_001025598,NM_181720	chr1,chr1,chr1	+,-,-	KLHDC9,ARHGAP30,ARHGAP30	22990,-5037,-5037
chr2:27194440-27195158	chr2	+	27194499	27195125	True	NM_012326,NM_001134693	chr2,chr2	+,-	MAPRE3,OST4	-1031,99496
chr1:9132150-9132875	chr1	+	9132544	9132740	True	NM_001215,NM_003039,NM_001135585	chr1,chr1,chr1	+,-,-	CA6,SLC2A5,SLC2A5	-126673,-2657,-2657
chr2:61287177-61288139	chr2	+	61287519	61288040	True	NM_032506,NM_144709,NM_001129993	chr2,chr2,chr2	+,-,+	KIAA1841,PUS10,KIAA1841	5322,-42154,4965
chr19:8579831-8580234	chr19	+	8580057	8580207	True	NM_001146175,NM_032370,NM_031203	chr19,chr19,chr19	-,-,+	ZNF414,ZNF414,HNRNPM	-1009,-1009,-70313
chr1:25073402-25073746	chr1	+	25073508	25073721	True	NM_013943,NM_004350	chr1,chr1	+,-	CLIC4,RUNX3	-1806,183106
chr1:227913941-227915235	chr1	+	227914155	227915270	True	NR_024485,NR_024486,NM_053052,NM_001161465,NM_023007	chr1,chr1,chr1,chr1,chr1	+,+,+,-,-	LOC100130093,LOC100130093,SNAP47,JMJD4,JMJD4	969,969,7426,7892,7892
chr7:47841388-47841711	chr7	+	47841397	47841479	True	NM_025031,NM_138295	chr7,chr7	+,-	C7orf69,PKD1L1	-6574,146652
chr17:54281210-54281832	chr17	+	54281233	54281354	True	NM_153228,NM_001099640	chr17,chr17	+,-	ANKFN1,TMEM100	-50453,-471751
chr16:9058195-9058503	chr16	+	9058212	9058352	True	NM_003470,NM_014117	chr16,chr16	-,+	USP7,C16orf72	-871,127184
chr12:108731994-108732821	chr12	+	108732183	108732607	True	NM_001142344,NM_004072,NM_007076,NM_001142343	chr12,chr12,chr12,chr12	-,-,+,-	CMKLR1,CMKLR1,FICD,CMKLR1	545,545,176443,545
chr7:108094980-108095346	chr7	+	108094979	108095317	True	NM_001193584,NM_005010,NM_012328,NM_001193583,NM_001193582	chr7,chr7,chr7,chr7,chr7	-,-,+,-,-	NRCAM,NRCAM,DNAJB9,NRCAM,NRCAM	1574,1574,114871,1574,1574
chr7:64197160-64198654	chr7	+	64197762	64198070	True	NR_002789,NM_001160183	chr7,chr7	-,+	LOC168474,ZNF138	116164,56700
chr19:33853467-33854863	chr19	+	33853488	33854734	True	NM_001806,NM_004364	chr19,chr19	+,-	CEBPG,CEBPA	9874,-60058
chr22:18506635-18507074	chr22	+	18506791	18507025	True	NM_001136004,NM_015241,NR_024417,NM_001122731	chr22,chr22,chr22,chr22	-,-,+,-	MICAL3,MICAL3,FLJ41941,MICAL3	350,350,5125,350
chr8:73445505-73446393	chr8	+	73445505	73446439	True	NM_004770,NR_033867	chr8,chr8	+,-	KCNB2,LOC392232	3186,-281636
chr8:61587751-61589699	chr8	+	61588492	61589709	True	NR_034003,NM_017780	chr8,chr8	-,+	LOC100130298,CHD7	290653,1629
chr7:107750565-107751589	chr7	+	107750857	107751582	True	NM_007356,NM_000108	chr7,chr7	-,+	LAMB4,DLD	19270,-219322
chr10:5855955-5857463	chr10	+	5856039	5857295	True	NM_001115156,NM_001494,NM_178150	chr10,chr10,chr10	-,-,+	GDI2,GDI2,FBXO18	-527,-527,74918
chr20:305535-305924	chr20	+	305575	305821	True	NM_153269,NM_006943	chr20,chr20	-,+	C20orf96,SOX12	-34185,417
chr20:44034009-44034573	chr20	+	44034062	44034496	True	NM_001197140,NM_014477,NM_001197139,NM_001048226,NM_001048225,NM_001048224,NM_001048223,NM_001048222,NM_001048221,NM_018478	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,-,+,+,+,+,+,+,+,+	DBNDD2,TP53TG5,DBNDD2,DBNDD2,DBNDD2,DBNDD2,DBNDD2,DBNDD2,DBNDD2,DBNDD2	324,-27105,136,2132,2132,731,731,158,158,364
chr5:112630071-112630383	chr5	+	112630119	112630297	True	NM_002387,NM_022828	chr5,chr5	-,+	MCC,YTHDC2	365,219093
chr12:63543764-63544382	chr12	+	63543876	63544228	True	NM_000706,NR_029661	chr12,chr12	-,+	AVPR1A,MIRLET7I	2412,-546461
chr13:49794670-49794925	chr13	+	49794710	49794960	True	NM_030925,NM_001507	chr13,chr13	-,+	CAB39L,MLNR	180825,-287
chr5:134299804-134300647	chr5	+	134299910	134300685	True	NM_002653,NM_178019	chr5,chr5	-,+	PITX1,CATSPER3	69329,2910
chr5:774585-775126	chr5	+	774931	775143	True	NM_001166260,NM_024786	chr5,chr5	+,-	TRIP13,ZDHHC11	117825,76008
chr8:124085358-124085642	chr8	+	124085366	124085680	True	NM_001145088,NM_024295,NM_145647	chr8,chr8,chr8	+,-,+	WDR67,DERL1,WDR67	-497,-30718,-497
chr12:2902478-2902777	chr12	+	2902569	2902783	True	NM_002014,NR_033958	chr12,chr12	+,-	FKBP4,LOC283440	1324,-21734
chr8:59466165-59467207	chr8	+	59466236	59466967	True	NM_000780,NM_005625,NM_001007070,NM_001007067,NM_001007068,NM_001007069	chr8,chr8,chr8,chr8,chr8,chr8	-,+,+,+,+,+	CYP7A1,SDCBP,SDCBP,SDCBP,SDCBP,SDCBP	-53516,-559,-559,-559,-559,-559
chr9:100819325-100819730	chr9	+	100819331	100819749	True	NM_018946,NM_014788	chr9,chr9	+,-	NANS,TRIM14	-423,61787
chr4:155297962-155298500	chr4	+	155297987	155298549	True	NM_017639,NM_001184741	chr4,chr4	-,+	DCHS2,FGB	13950,185582
chr19:18717885-18718331	chr19	+	18717893	18718291	True	NM_012109,NM_004750	chr19,chr19	+,-	TMEM59L,CRLF1	5390,-233
chr10:61093102-61094505	chr10	+	61093288	61094153	True	NM_001001971,NM_001143774	chr10,chr10	-,+	FAM13C,PHYHIPL	28262,-156112
chr10:82302244-82302985	chr10	+	82302445	82302835	True	NM_207372,NM_138812,NM_001145719	chr10,chr10,chr10	+,-,+	SH2D4B,DYDC1,SH2D4B	-4845,-185945,-1928
chr21:40761322-40762094	chr21	+	40761374	40762126	True	NM_004627,NM_004965,NM_001146218	chr21,chr21,chr21	+,-,+	WRB,HMGN1,WRB	-9221,-40327,-1742
chr7:123678129-123678627	chr7	+	123678176	123678493	True	NM_001174046,NM_001136002	chr7,chr7	+,-	SPAM1,TMEM229A	-112327,-4653
chr1:17248875-17249114	chr1	+	17248913	17248973	True	NM_014675,NM_001135248	chr1,chr1	+,-	CROCC,MFAP2	-519,58250
chr1:154654177-154654613	chr1	+	154654358	154654654	True	NM_000748,NM_001025107	chr1,chr1	+,-	CHRNB2,ADAR	-114156,-53902
chr1:115325383-115325971	chr1	+	115325618	115325984	True	NM_003176,NM_025073,NM_001102396	chr1,chr1,chr1	+,-,-	SYCP1,SIKE1,SIKE1	71470,-2310,-2310
chr11:61346770-61347854	chr11	+	61346776	61347516	True	NM_004200,NR_002775	chr11,chr11	-,+	SYT7,RPLP0P2	832,34991
chr4:186693361-186693707	chr4	+	186693367	186693648	True	NM_001145673,NM_003265	chr4,chr4	-,+	SORBS2,TLR3	3469,296660
chrX:95938396-95939321	chrX	+	95938553	95939337	True	NM_007309,NR_003539,NM_006729	chrX,chrX,chrX	+,-,+	DIAPH2,LOC643486,DIAPH2	324,-345652,324
chr2:9771442-9772443	chr2	+	9771616	9772409	True	NM_006826,NM_001039613	chr2,chr2	-,+	YWHAQ,IAH1	-510,-156999
chr16:775100-775478	chr16	+	775273	775467	True	NM_001031737,NM_023933,NM_032304	chr16,chr16,chr16	-,+,+	CCDC78,FAM173A,HAGHL	1056,-4166,1798
chr17:3793500-3793917	chr17	+	3793524	3793952	True	NM_172207,NM_172206,NM_032294,NM_031965	chr17,chr17,chr17,chr17	-,-,-,+	CAMKK1,CAMKK1,CAMKK1,GSG2	2435,135,2435,-166378
chr5:173147504-173148839	chr5	+	173147668	173148836	True	NR_027109,NM_138369	chr5,chr5	+,-	LOC285593,BOD1	-141062,-104002
chr19:6278842-6279061	chr19	+	6278886	6279018	True	NM_006012,NM_005934	chr19,chr19	+,-	CLPP,MLLT1	82444,991
chr19:12949604-12950694	chr19	+	12949993	12950527	True	NM_001080997,NM_014975,NM_031429	chr19,chr19,chr19	-,+,-	RTBDN,MAST1,RTBDN	-8786,-786,-3763
chr5:18733017-18733635	chr5	+	18733041	18733357	True	NM_001167667,NM_006317	chr5,chr5	-,+	CDH18,BASP1	1255046,-1515342
chr14:52735850-52736108	chr14	+	52735918	52736149	True	NM_007361,NM_000953	chr14,chr14	-,+	NID2,PTGDR	-199972,-1538
chr12:12868678-12868981	chr12	+	12868717	12868991	True	NM_001130415,NM_004064,NM_006143	chr12,chr12,chr12	+,+,-	APOLD1,CDKN1B,GPR19	9859,1310,-19596
chr2:100763754-100764528	chr2	+	100763881	100764275	True	NM_002285,NM_001011717	chr2,chr2	-,+	AFF3,NMS	-4844,322668
chr7:72637515-72637960	chr7	+	72637653	72637997	True	NR_002164,NR_003186	chr7,chr7	-,+	GTF2IRD2P1,NCF1B	47711,-3037
chr7:72637515-72637960	chr7	-	74584431	74584775	False	NM_001003795,NR_003187	chr7,chr7	+,-	GTF2IRD2B,NCF1C	-76135,3098
chr7:72637515-72637960	chr7	+	74191353	74191699	False	NM_173537,NM_000265	chr7,chr7	-,+	GTF2IRD2,NCF1	76192,-3102
chr10:102738338-102739230	chr10	+	102738360	102739074	True	NM_001163812,NM_001163813,NM_001163814,NM_032112,NM_021830,NR_030339,NM_017893,NM_176794,NM_001203244,NM_176793,NM_176792	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,-,+,+,+,-,+,-,-	C10orf2,C10orf2,C10orf2,MRPL43,C10orf2,MIR608,SEMA4G,MRPL43,SEMA4G,MRPL43,MRPL43	8218,8218,8218,8248,8218,-3669,-6125,8248,-6125,8248,8248
chr9:104248739-104249006	chr9	+	104248807	104249049	True	NM_019592,NM_032342	chr9,chr9	+,-	RNF20,C9orf125	47083,476
chr1:48241966-48243373	chr1	+	48242117	48243411	True	NM_001194986,NM_004474	chr1,chr1	-,+	LOC388630,FOXD2	219201,-340479
chr17:74721210-74722060	chr17	+	74721575	74722057	True	NM_001080510,NM_015167,NM_001081461	chr17,chr17,chr17	+,-,-	METTL23,JMJD6,JMJD6	892,874,874
chr9:97401599-97401808	chr9	+	97401646	97401850	True	NM_000507,NM_001193331,NM_001127628	chr9,chr9,chr9	-,+,-	FBP1,C9orf3,FBP1	123,87100,731
chr10:71929913-71930184	chr10	+	71929979	71930233	True	NM_001142648,NM_018649,NM_020150	chr10,chr10,chr10	-,+,-	SAR1A,H2AFY2,SAR1A	102,-117673,102
chr5:122179779-122180520	chr5	+	122179857	122180471	True	NM_000943,NM_014035	chr5,chr5	-,+	PPIC,SNX24	192004,688
chr17:80479670-80480335	chr17	+	80479849	80479998	True	NR_036519,NM_004514	chr17,chr17	-,+	C17orf62,FOXK2	-71142,-2313
chr14:24836840-24837313	chr14	+	24836954	24837190	True	NM_001198966,NM_001198967,NM_001198965,NM_006871,NM_004554,NM_001136022	chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,-,+,+	NFATC4,NFATC4,NFATC4,RIPK3,NFATC4,NFATC4	1111,-860,35,-27712,35,-860
chr9:124033787-124034008	chr9	+	124033808	124033944	True	NM_198252,NM_001127663,NM_001127662,NM_016322,NM_001127667,NM_001127666,NM_001127665,NM_001127664	chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9	+,+,+,-,+,+,+,+	GSN,GSN,GSN,RAB14,GSN,GSN,GSN,GSN	-3479,-3479,-3479,-69443,-3479,-3479,-3479,-3479
chr3:57312676-57313648	chr3	+	57312710	57313289	True	NM_012096,NM_130387	chr3,chr3	+,-	APPL1,ASB14	-51003,80
chr17:26850083-26850358	chr17	+	26850139	26850297	True	NM_005148,NM_003593	chr17,chr17	-,+	UNC119,FOXN1	29399,661
chr22:22218514-22220398	chr22	+	22218859	22220389	True	NM_148176,NM_002745,NM_138957	chr22,chr22,chr22	+,-,-	PPIL2,MAPK1,MAPK1	-198642,1640,1640
chr10:36813342-36814010	chr10	+	36813620	36814049	True	NM_052997,NM_031866	chr10,chr10	+,-	ANKRD30A,FZD8	600735,-883258
chr14:94759469-94759741	chr14	+	94759481	94759785	True	NM_001100607,NM_058237,NM_016186	chr14,chr14,chr14	-,+,-	SERPINA10,PPP4R4,SERPINA10	-39,-118883,-120
chr11:64881049-64881773	chr11	+	64881138	64881770	True	NM_001997,NR_037568,NR_037567,NM_014205,NM_003273,NM_004927	chr11,chr11,chr11,chr11,chr11,chr11	-,+,+,-,+,+	FAU,MRPL49,MRPL49,ZNHIT2,TM7SF2,MRPL49	7952,7945,7884,3450,-1848,7945
chr9:134404779-134405221	chr9	+	134404867	134405129	True	NM_001135954,NM_007171,NM_031432	chr9,chr9,chr9	-,+,-	UCK1,POMT1,UCK1	1583,-26629,1583
chr7:5254572-5254796	chr7	+	5254578	5254643	True	NM_001033520,NR_034163	chr7,chr7	+,-	WIPI2,ZNF890P	-729,-70401
chr16:57832083-57832289	chr16	+	57832210	57832284	True	NM_001130099,NM_001130100,NM_005550,NM_005886	chr16,chr16,chr16,chr16	-,-,-,+	KIFC3,KIFC3,KIFC3,KATNB1	-281,4205,4205,-62601
chr10:100177862-100178077	chr10	+	100177918	100178014	True	NM_014472,NM_032709	chr10,chr10	+,-	C10orf28,PYROXD2	-283588,-2940
chrX:44335461-44336301	chrX	+	44335463	44336289	True	NM_022076,NM_173794	chrX,chrX	+,-	DUSP21,FUNDC1	366959,65982
chr19:16830241-16830611	chr19	+	16830262	16830654	True	NM_001007525,NM_024104	chr19,chr19	+,-	NWD1,C19orf42	132,-59294
chr3:71833541-71834094	chr3	+	71833564	71833900	True	NM_018971,NM_001126128,NM_021935	chr3,chr3,chr3	+,-,-	GPR27,PROK2,PROK2	-30414,507,507
chr14:95636597-95637164	chr14	+	95636840	95636970	True	NR_015415,NM_177438	chr14,chr14	+,-	FLJ45244,DICER1	-12876,-13081
chr19:30302028-30302233	chr19	+	30302065	30302233	True	NM_001238,NM_057182,NM_031448	chr19,chr19,chr19	+,+,-	CCNE1,CCNE1,C19orf12	667,1327,-95613
chr13:52484868-52485686	chr13	+	52485002	52485700	True	NR_027048,NM_031290	chr13,chr13	-,+	NCRNA00282,CCDC70	-65716,-48937
chr20:32822462-32822967	chr20	+	32822658	32822972	True	NM_001672,NM_000687	chr20,chr20	+,-	ASIP,AHCY	25198,68293
chr17:35715216-35715697	chr17	+	35715249	35715711	True	NM_198836,NM_173625	chr17,chr17	-,+	ACACA,C17orf78	398,17273
chr17:17993043-17993671	chr17	+	17993182	17993454	True	NM_145691,NM_001388	chr17,chr17	-,+	ATPAF2,DRG2	-50702,-1950
chr8:116681004-116681323	chr8	+	116681054	116681258	True	NM_014112,NM_032334	chr8,chr8	-,+	TRPS1,UTP23	20,1097483
chr14:36261911-36263821	chr14	+	36262100	36263615	True	NM_014990,NM_032352	chr14,chr14	-,+	RALGAPA1,BRMS1L	14875,31981
chr19:54747397-54748374	chr19	+	54747739	54748413	True	NM_001013,NM_024318	chr19,chr19	+,-	RPS9,LILRA6	-43064,-1015
chr19:54747397-54748374	chr19	+	54728083	54728235	False	NM_001013,NM_001081450,NM_006864	chr19,chr19,chr19	+,-,-	RPS9,LILRB3,LILRB3	-23408,-1124,-1124
chrX:69493365-69493997	chrX	+	69493370	69493981	True	NM_004312,NM_002565,NM_001032726	chrX,chrX,chrX	+,-,+	ARR3,P2RY4,RAB41	-5238,-13716,8040
chr1:13516867-13517731	chr1	+	13517144	13517616	True	NM_001100114,NM_001099852,NM_001099850	chr1,chr1,chr1	+,+,-	PRAMEF21,PRAMEF20,PRAMEF18	4346,-1137,-39575
chr1:13516867-13517731	chr1	+	13737985	13738457	False	NM_001100114,NM_001099852,NM_001099850	chr1,chr1,chr1	+,+,-	PRAMEF21,PRAMEF20,PRAMEF18	4344,-1137,-39580
chr2:231790730-231791251	chr2	+	231790797	231791291	True	NM_030926,NM_005683	chr2,chr2	+,-	ITM2C,GPR55	-61233,-856
chr10:47656253-47656627	chr10	+	47656422	47656667	True	NR_003601,NR_024495	chr10,chr10	+,-	ANTXRL,LOC642826	1566,-412928
chr12:14925593-14926078	chr12	+	14925844	14926127	True	NM_177925,NR_027716,NM_175054	chr12,chr12,chr12	+,+,-	H2AFJ,H2AFJ,HIST4H4	1142,1142,-1779
chr7:138360494-138360824	chr7	+	138360522	138360602	True	NM_001139456,NM_001085429	chr7,chr7	-,+	SVOPL,TMEM213	3238,122136
chr10:30978983-30980035	chr10	+	30979138	30980083	True	NM_183058,NM_005204	chr10,chr10	-,+	LYZL2,MAP3K8	-60491,-256323
chr7:80088353-80089788	chr7	+	80088622	80089722	True	NM_001102386,NM_001001547	chr7,chr7	-,+	GNAT3,CD36	51577,141781
chr3:38179342-38180101	chr3	+	38179350	38180109	True	NM_001172566,NM_001172567,NR_024024,NM_001172568,NM_001172569,NM_001130410,NM_001607,NM_002468	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,-,+,+,-,-,+	MYD88,MYD88,ACAA1,MYD88,MYD88,ACAA1,ACAA1,MYD88	43,43,-617,43,43,-617,-617,43
chr9:123340467-123340815	chr9	+	123340589	123340829	True	NR_027442,NM_018249,NM_001011649	chr9,chr9,chr9	+,-,-	LOC100288842,CDK5RAP2,CDK5RAP2	214945,1658,1658
chr19:23578290-23578677	chr19	+	23578320	23578690	True	NR_003662,NM_003430	chr19,chr19	+,-	RPSAP58,ZNF91	367125,-51
chr19:9693397-9694270	chr19	+	9693438	9694011	True	NM_001008727,NM_001172651	chr19,chr19	-,+	ZNF121,ZNF177	1255,-206500
chr19:11666261-11667205	chr19	+	11666320	11667111	True	NM_032377,NM_001299	chr19,chr19	-,+	ELOF1,CNN1	3001,-16792
chr6:14755943-14756163	chr6	+	14756065	14756191	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	490335,907148
chr1:155005212-155005654	chr1	+	155005214	155005702	True	NM_152494,NM_144622,NM_001143687	chr1,chr1,chr1	+,-,+	DCST1,DCST2,DCST1	579,605,579
chr20:48532414-48532877	chr20	+	48532420	48532636	True	NM_006038,NM_001135773,NM_018683	chr20,chr20,chr20	-,-,+	SPATA2,SPATA2,RNF114	-340,-2144,20277
chr3:128839144-128839482	chr3	+	128839270	128839524	True	NM_198490,NM_001204888,NM_001204885,NM_001204884,NM_001204887,NM_001204886,NM_001204883,NM_000174	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,-,-,-,+	RAB43,RAB43,RAB43,RAB43,RAB43,RAB43,RAB43,GP9	1173,1173,1291,1383,1173,1173,1519,-59676
chr6:132708784-132710051	chr6	+	132709101	132710052	True	NM_015529,NM_175057	chr6,chr6	-,+	MOXD1,TAAR9	12663,149374
chr20:57769550-57769794	chr20	+	57769599	57769831	True	NR_037930,NM_178457	chr20,chr20	-,+	SLMO2-ATP5E,ZNF831	-151698,-3575
chr10:121396755-121397926	chr10	+	121396848	121397941	True	NM_004281,NM_003252	chr10,chr10	+,-	BAG3,TIAL1	12940,-40307
chr9:7477549-7478057	chr9	+	7477585	7477816	True	NM_033428,NM_015061	chr9,chr9	-,+	C9orf123,KDM4C	322040,-719995
chr9:19048309-19049019	chr9	+	19048472	19048972	True	NM_153707,NM_006570,NR_003009	chr9,chr9,chr9	-,+,-	FAM154A,RRAGA,SCARNA8	-15216,399,14862
chr3:50631450-50632619	chr3	+	50631594	50632673	True	NM_013324,NM_004635	chr3,chr3	-,+	CISH,MAPKAPK3	16646,21927
chr19:41354627-41355837	chr19	+	41354803	41355459	True	NM_000762,NM_053046	chr19,chr19	-,+	CYP2A6,EGLN2	943,-49520
chr10:95390392-95390917	chr10	+	95390569	95390792	True	NM_006744,NM_006204	chr10,chr10	-,+	RBP4,PDE6C	-29576,-18276
chr2:176957912-176958152	chr2	+	176957993	176958199	True	NM_001080458,NM_021193,NM_000523	chr2,chr2,chr2	-,+,+	EVX2,HOXD12,HOXD13	-9303,6330,-512
chr16:85832204-85832758	chr16	+	85832254	85832516	True	NM_001142288,NM_001861,NM_006067	chr16,chr16,chr16	-,+,-	COX4NB,COX4I1,COX4NB	682,656,682
chr1:38231417-38231741	chr1	+	38231514	38231782	True	NM_001031740,NM_001099439,NM_173641	chr1,chr1,chr1	+,-,-	MANEAL,EPHA10,EPHA10	27991,-690,-690
chr1:22977053-22978023	chr1	+	22977108	22977933	True	NM_000491,NR_036214,NM_001114101,NM_172369	chr1,chr1,chr1,chr1	+,-,+,+	C1QB,MIR4253,C1QC,C1QC	1748,211837,-7053,-7053
chr3:12705294-12705501	chr3	+	12705312	12705522	True	NM_002880,NM_014160	chr3,chr3	-,+	RAF1,MKRN2	228,-106769
chr8:27104372-27104627	chr8	+	27104379	27104499	True	NM_173174,NM_030795	chr8,chr8	+,-	PTK2B,STMN4	64499,11456
chr6:91254227-91255274	chr6	+	91254229	91255304	True	NM_145331,NM_032602	chr6,chr6	-,+	MAP3K7,GJA10	41510,-650092
chrX:12163522-12164337	chrX	+	12163524	12164189	True	NM_006125,NM_014728	chrX,chrX	-,+	ARHGAP6,FRMPD4	-479703,-6990
chr15:98410060-98410841	chr15	+	98410062	98410817	True	NM_183376,NR_024172,NR_024173	chr15,chr15,chr15	+,-,-	ARRDC4,LOC91948,LOC91948	93115,6899,6899
chr17:9483928-9484132	chr17	+	9484083	9484178	True	NR_033656,NM_001080556,NM_145054,NM_004853	chr17,chr17,chr17,chr17	-,+,+,-	STX8,WDR16,WDR16,STX8	-4808,-4195,-4195,-4808
chr8:9009306-9010018	chr8	+	9009449	9010018	True	NM_153332,NM_024607,NM_001201329	chr8,chr8,chr8	+,-,-	ERI1,PPP1R3B,PPP1R3B	-149186,-1229,-297
chr2:113379724-113381173	chr2	+	113379757	113380367	True	NR_033871,NM_005415	chr2,chr2	-,+	FLJ42351,SLC20A1	21448,23066
chr17:4270436-4271457	chr17	+	4270436	4271348	True	NM_003342,NM_182538	chr17,chr17	-,+	UBE2G1,SPNS3	-467,65870
chr7:128505189-128505442	chr7	+	128505198	128505481	True	NM_001198909,NM_001195150,NM_004231,NM_001135914	chr7,chr7,chr7,chr7	+,+,+,-	ATP6V1F,LOC100130705,ATP6V1F,KCP	-2392,982,-2392,45343
chr16:2060226-2060610	chr16	+	2060267	2060576	True	NM_178167,NM_001099456	chr16,chr16	-,+	ZNF598,NPW	-504,8944
chr4:140063509-140064906	chr4	+	140063651	140064433	True	NM_201999,NM_012118	chr4,chr4	-,+	ELF2,CCRN4L	-3045,-126771
chr12:122984311-122984694	chr12	+	122984534	122984709	True	NM_014708,NM_017612	chr12,chr12	+,-	KNTC1,ZCCHC8	27099,864
chr9:94876939-94877342	chr9	+	94877191	94877315	True	NR_015444,NM_006415,NM_178324	chr9,chr9,chr9	+,-,-	LOC100128076,SPTLC1,SPTLC1	17800,425,425
chr11:47278574-47279155	chr11	+	47278608	47279194	True	NM_001130102,NM_001610,NM_001130101,NM_001131064,NM_005693	chr11,chr11,chr11,chr11,chr11	+,-,+,-,+	NR1H3,ACP2,NR1H3,ACP2,NR1H3	-8211,-8151,302,-8151,302
chr17:56562607-56563030	chr17	+	56562689	56562786	True	NM_001080439,NM_002876	chr17,chr17	-,+	HSF5,RAD51C	3030,207176
chr12:88406642-88407718	chr12	+	88407005	88407754	True	NM_152589,NM_001009894	chr12,chr12	-,+	C12orf50,C12orf29	15472,21513
chr11:1874447-1874837	chr11	+	1874451	1874871	True	NM_002339,NR_036185	chr11,chr11	+,-	LSP1,MIR4298	-302,5945
chr9:4666214-4666416	chr9	+	4666235	4666356	True	NM_203453,NM_001039395	chr9,chr9	+,-	PPAPDC2,C9orf68	-3988,375
chr13:20437763-20438010	chr13	+	20437862	20438026	True	NM_001142684,NM_001039649,NM_003453,NM_001039650	chr13,chr13,chr13,chr13	-,-,+,-	ZMYM5,ZMYM5,ZMYM2,ZMYM5	-86,-86,94783,-86
chr2:42273244-42273645	chr2	+	42273332	42273678	True	NM_138370,NM_004718	chr2,chr2	+,-	PKDCC,COX7A2L	1482,314728
chr17:77705313-77706326	chr17	+	77705511	77706282	True	NM_178543,NM_020649	chr17,chr17	+,-	ENPP7,CBX8	-680,64683
chr10:43273444-43274214	chr10	+	43273796	43274218	True	NM_014753,NM_006955	chr10,chr10	+,-	BMS1,ZNF33B	3735,-139804
chr9:35904912-35905534	chr9	+	35904998	35905576	True	NR_024283,NM_001004487,NM_001039792	chr9,chr9,chr9	+,-,+	LOC158376,OR13J1,HRCT1	3903,-34600,612
chr22:41863167-41864671	chr22	+	41863200	41864713	True	NM_032758,NM_001098	chr22,chr22	-,+	PHF5A,ACO2	45,415
chr17:46179543-46180915	chr17	+	46179970	46180964	True	NM_001127228,NM_152244,NM_006807,NM_013323	chr17,chr17,chr17,chr17	-,+,-,+	CBX1,SNX11,CBX1,SNX11	-1087,3955,-1410,3982
chr19:58447247-58448396	chr19	+	58447253	58448268	True	NM_133460,NR_036508	chr19,chr19	-,+	ZNF418,LOC100128398	-513,65993
chr14:76446682-76447005	chr14	+	76446732	76446972	True	NM_001102564,NM_052873,NM_003239	chr14,chr14,chr14	+,+,-	C14orf179,C14orf179,TGFB3	5123,5123,1170
chr19:55836638-55836918	chr19	+	55836734	55836794	True	NM_001085488,NM_032701	chr19,chr19	-,+	TMEM150B,SUV420H2	-26,14426
chrX:24716617-24716861	chrX	+	24716659	24716729	True	NM_016937,NM_001163264	chrX,chrX	+,-	POLA1,PCYT1B	-4656,-25680
chr6:3227357-3227802	chr6	+	3227419	3227829	True	NM_001135750,NM_178012	chr6,chr6	+,-	PSMG4,TUBB2B	31332,189
chr19:35839086-35840096	chr19	+	35839133	35840067	True	NM_005303,NM_152481,NM_005304	chr19,chr19,chr19	+,-,+	FFAR1,FAM187B,FFAR3	2377,-119505,9420
chr14:54954285-54955431	chr14	+	54954439	54955195	True	NM_004124,NM_006568	chr14,chr14	-,+	GMFB,CGRRF1	599,21391
chrX:103003745-103004296	chrX	+	103003786	103004305	True	NM_001172285,NM_001128834	chrX,chrX	-,+	GLRA4,PLP1	-20234,27133
chr22:40248206-40249786	chr22	+	40248818	40249163	True	NM_004810,NM_152512	chr22,chr22	+,-	GRAP2,ENTHD1	47922,40694
chr1:173885600-173886026	chr1	+	173885691	173886025	True	NM_001122770,NM_000488	chr1,chr1	+,-	ZBTB37,SERPINC1	-48249,541
chr8:71581544-71581992	chr8	+	71581692	71581848	True	NM_016027,NM_001011720	chr8,chr8	-,+	LACTB2,XKR9	-245,-143
chr5:179337473-179338072	chr5	+	179337622	179338119	True	NM_015043,NM_003900,NM_198868	chr5,chr5,chr5	-,+,-	TBC1D9B,SQSTM1,TBC1D9B	-2766,-89831,-2766
chr19:36606199-36606597	chr19	+	36606417	36606585	True	NM_006233,NM_001281	chr19,chr19	-,+	POLR2I,TBCB	-211,-580
chr6:149067819-149068069	chr6	+	149067856	149068041	True	NM_207360,NM_005715	chr6,chr6	-,+	ZC3H12D,UST	738157,229
chr8:7684280-7686130	chr8	+	7685284	7686085	True	NM_080389,NM_001040702,NM_001040703,NM_001040704,NM_152250,NM_152251	chr8,chr8,chr8,chr8,chr8,chr8	+,+,-,+,-,+	DEFB104A,DEFB104B,DEFB105B,DEFB106B,DEFB105A,DEFB106A	7907,7907,-3924,-2653,-3924,-2653
chr8:7684280-7686130	chr8	-	7340515	7341172	False	NM_080389,NM_001040702,NM_001040703,NM_001040704,NM_152250,NM_152251	chr8,chr8,chr8,chr8,chr8,chr8	-,-,+,-,+,-	DEFB104A,DEFB104B,DEFB105B,DEFB106B,DEFB105A,DEFB106A	-7911,-7911,4070,2788,4070,2788
chr17:40689252-40689711	chr17	+	40689396	40689706	True	NM_000263,NM_013290	chr17,chr17	+,-	NAGLU,PSMC3IP	-1496,40091
chr19:1954139-1954425	chr19	+	1954139	1954473	True	NR_033400,NM_001319	chr19,chr19	-,+	C19orf34,CSNK1G2	125,-13029
chr2:113809071-113810767	chr2	+	113809400	113810810	True	NM_012275,NM_173170,NM_173178,NM_014438	chr2,chr2,chr2,chr2	+,+,-,-	IL1F5,IL1F5,IL1F8,IL1F8	5874,5404,230,230
chr17:73848829-73850721	chr17	+	73848909	73850706	True	NM_012478,NM_199242,NM_001080419	chr17,chr17,chr17	-,-,+	WBP2,UNC13D,UNK	846,-8111,-68280
chr12:124069153-124069430	chr12	+	124069211	124069393	True	NM_001414,NM_006815	chr12,chr12	-,+	EIF2B1,TMED2	48980,-186
chr1:28674534-28675317	chr1	+	28674902	28675150	True	NM_014280,NM_017638	chr1,chr1	-,+	DNAJC8,MED18	-115360,-19440
chr4:165952285-165952710	chr4	+	165952446	165952686	True	NM_001012414,NM_152620	chr4,chr4	-,+	TRIM61,TRIM60	-53628,464
chr5:34195800-34196923	chr5	+	34196174	34196226	True	NM_016568,NR_037951	chr5,chr5	+,-	RXFP3,C1QTNF3-AMACR	-259736,-71541
chr2:220196838-220197272	chr2	+	220196942	220197174	True	NM_001007089,NM_006736	chr2,chr2	-,+	RESP18,DNAJB2	775,-52953
chr11:540318-540613	chr11	+	540363	540657	True	NM_176795,NM_001130442,NM_005343,NM_198075	chr11,chr11,chr11,chr11	-,-,-,+	HRAS,HRAS,HRAS,LRRC56	-4813,-4813,-4813,-2892
chr16:28962880-28964350	chr16	+	28962908	28963993	True	NM_024816,NM_032815	chr16,chr16	-,+	RABEP2,NFATC2IP	-26376,-641
chr11:114167063-114167654	chr11	+	114167114	114167703	True	NM_019021,NM_006169	chr11,chr11	-,+	C11orf71,NNMT	103486,-637
chr11:65097914-65099285	chr11	+	65098102	65099219	True	NM_006268,NM_001077241	chr11,chr11	+,-	DPF2,SLC25A45	2126,50987
chr9:104500751-104500980	chr9	+	104500833	104500939	True	NM_019592,NM_133445	chr9,chr9	+,-	RNF20,GRIN3A	-204753,3
chr16:11879216-11879566	chr16	+	11879374	11879437	True	NM_003498,NM_014153	chr16,chr16	+,-	SNN,ZC3H7A	-117137,11730
chr13:20528359-20529041	chr13	+	20528603	20528871	True	NM_001039650,NM_197968,NM_001190964,NM_003453,NM_001190965	chr13,chr13,chr13,chr13,chr13	-,+,+,+,+	ZMYM5,ZMYM2,ZMYM2,ZMYM2,ZMYM2	-90827,3938,3976,3938,4102
chr2:110861435-110863423	chr2	+	110861844	110863246	True	NM_005434,NR_037626	chr2,chr2	-,+	MALL,LOC100507334	10947,139968
chr5:89895936-89896769	chr5	+	89896601	89896785	True	NM_198273,NR_003149	chr5,chr5	-,+	LYSMD3,GPR98	-71200,-42043
chr9:124262496-124262931	chr9	+	124262675	124262938	True	NR_003191,NM_032552	chr9,chr9	-,+	GGTA1,DAB2IP	-369,66460
chr8:125550427-125550925	chr8	+	125550529	125550865	True	NM_001146160,NR_027427,NM_005005,NM_032026	chr8,chr8,chr8,chr8	-,-,+,-	TATDN1,TATDN1,NDUFB9,TATDN1	514,514,477,514
chr11:64068046-64068308	chr11	+	64068130	64068290	True	NM_004451,NM_001039496,NM_032989,NM_033310	chr11,chr11,chr11,chr11	+,+,-,+	ESRRA,C11orf20,BAD,KCNK4	4753,-318,-15954,-9388
chr5:158631666-158633138	chr5	+	158631919	158633071	True	NM_001199381,NM_001199380,NM_001199383,NM_001199382,NM_145049,NM_144726	chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,+,-	RNF145,RNF145,RNF145,RNF145,UBLCP1,RNF145	2125,4046,3548,1641,57017,1819
chr10:101090229-101090652	chr10	+	101090285	101090579	True	NM_021828,NM_020348	chr10,chr10	-,+	HPSE2,CNNM1	-94653,-1480
chr17:39620295-39620628	chr17	+	39620348	39620580	True	NM_030975,NM_002278	chr17,chr17	+,-	KRTAP9-9,KRT32	-208763,3108
chr19:14223162-14223925	chr19	+	14223316	14223895	True	NR_024282,NM_207518,NM_002730	chr19,chr19,chr19	+,-,-	LOC113230,PRKACA,PRKACA	-39546,1154,4721
chr3:37902131-37902354	chr3	+	37902145	37902351	True	NM_005808,NM_001008392,NM_001130964	chr3,chr3,chr3	+,+,-	CTDSPL,CTDSPL,PLCD1	1317,1317,163977
chr9:102068373-102068640	chr9	+	102068555	102068623	True	NM_006808,NR_024532	chr9,chr9	+,-	SEC61B,ALG2	-84036,-84309
chr3:169542459-169542954	chr3	+	169542677	169542782	True	NM_001080460,NM_001172780	chr3,chr3	+,-	LRRIQ4,LRRC34	-3027,-12103
chr8:42407415-42408281	chr8	+	42407682	42408010	True	NM_006749,NM_001135675	chr8,chr8	-,+	SLC20A2,C8orf40	-10614,-10794
chr1:32663558-32663761	chr1	+	32663726	32663794	True	NM_001160042,NM_018134,NM_024296,NM_019118	chr1,chr1,chr1,chr1	+,+,+,-	IQCC,IQCC,CCDC28B,TMEM234	7441,7441,2407,24182
chr22:36647042-36648421	chr22	+	36647192	36648256	True	NM_145637,NM_145343,NM_001136540,NM_001136541,NM_003661	chr22,chr22,chr22,chr22,chr22	-,+,+,+,+	APOL2,APOL1,APOL1,APOL1,APOL1	-11192,860,860,860,860
chr19:36236875-36237569	chr19	+	36236972	36237387	True	NM_019104,NM_144987,NM_172341,NM_001040425,NM_024660	chr19,chr19,chr19,chr19,chr19	+,-,+,-,-	LIN37,U2AF1L4,PSENEN,U2AF1L4,IGFLR1	2124,-636,-529,-636,-3621
chr3:11882850-11883406	chr3	+	11882892	11883424	True	NM_138807,NM_003178	chr3,chr3	-,+	C3orf31,SYN2	4986,162437
chr20:3646878-3647550	chr20	+	3646888	3647144	True	NM_145762,NM_022139,NM_001197327	chr20,chr20,chr20	-,-,+	GFRA4,GFRA4,HSPA12B	-2842,-2842,66172
chr2:233402182-233402578	chr2	+	233402215	233402545	True	NM_005199,NM_145702	chr2,chr2	+,-	CHRNG,TIGD1	1891,12731
chr16:87527591-87528474	chr16	+	87527636	87528283	True	NM_022818,NM_015144	chr16,chr16	+,-	MAP1LC3B,ZCCHC14	-101887,-2176
chr2:153516586-153518131	chr2	+	153516830	153518131	True	NM_152522,NM_017892	chr2,chr2	+,-	ARL6IP6,PRPF40A	56291,55894
chr17:7836531-7838309	chr17	+	7836589	7838286	True	NM_053051,NR_030697,NM_001166621,NR_030684,NM_004732,NM_001037144,NM_021210	chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,-,-,+,-	CNTROB,TRAPPC1,TRAPPC1,TRAPPC1,KCNAB3,CNTROB,TRAPPC1	-1167,-1272,-1272,-1322,-3836,-1167,-1322
chr11:75271106-75272728	chr11	+	75271500	75272754	True	NM_030792,NM_001235	chr11,chr11	-,+	GDPD5,SERPINH1	-34901,415
chr3:128597633-128598093	chr3	+	128597679	128598071	True	NR_034179,NM_014049,NR_033426	chr3,chr3,chr3	-,+,+	LOC653712,ACAD9,ACAD9	-7295,261,261
chr1:39880263-39881098	chr1	+	39880462	39881003	True	NR_003929,NM_015038	chr1,chr1	-,+	PPIEL,KIAA0754	144422,-5349
chr2:241759211-241759415	chr2	+	241759245	241759429	True	NM_000030,NM_004321	chr2,chr2	+,-	AGXT,KIF1A	48732,245
chr10:95360592-95360830	chr10	+	95360658	95360836	True	NM_006744,NM_006204	chr10,chr10	-,+	RBP4,PDE6C	207,11508
chr1:26374178-26374720	chr1	+	26374326	26374469	True	NM_001004434,NM_032513,NM_004455	chr1,chr1,chr1	-,-,+	SLC30A2,SLC30A2,EXTL1	-1722,-1722,-26109
chr9:37590420-37591409	chr9	+	37590747	37591414	True	NM_014907,NM_001001790,NM_001134485,NM_001134484	chr9,chr9,chr9,chr9	+,-,-,-	FRMPD1,TOMM5,TOMM5,TOMM5	59637,1272,1272,1272
chr3:151029885-151031414	chr3	+	151030097	151031136	True	NM_053002,NM_023915	chr3,chr3	+,-	MED12L,GPR87	-225473,3563
chr3:1135023-1135261	chr3	+	1135074	1135188	True	NM_000564,NM_014461	chr3,chr3	-,+	IL5RA,CNTN6	2016920,-497
chr11:67505510-67506954	chr11	+	67505892	67506359	True	NM_007103,NM_001031615	chr11,chr11	+,-	NDUFV1,ALDH3B2	-131620,-57207
chr17:18263954-18265022	chr17	+	18263978	18264112	True	NM_004169,NM_148918,NM_001145127	chr17,chr17,chr17	-,-,+	SHMT1,SHMT1,EVPLL	2794,2794,16966
chr1:220961599-220961985	chr1	+	220961628	220961820	True	NM_022746,NM_012414	chr1,chr1	+,-	MOSC1,RAB3GAP2	-1640,-515785
chr4:37685625-37686429	chr4	+	37685800	37686278	True	NM_001085400,NM_018302,NM_001085399	chr4,chr4,chr4	-,+,-	RELL1,C4orf19,RELL1	1771,-99996,1771
chrX:118601954-118602168	chrX	+	118601990	118602072	True	NM_001152,NR_028443	chrX,chrX	+,-	SLC25A5,LOC100303728	290,1061
chr14:23841102-23841491	chr14	+	23841213	23841463	True	NM_032459,NM_022789,NM_172314,NM_001037288,NM_138460,NM_005864	chr14,chr14,chr14,chr14,chr14,chr14	-,+,+,+,+,-	EFS,IL25,IL25,CMTM5,CMTM5,EFS	-6371,606,554,4553,4553,-6371
chr13:42523665-42524595	chr13	+	42523849	42524307	True	NM_015058,NM_001204504	chr13,chr13	-,+	KIAA0564,DGKH	10978,89864
chr17:18521513-18522502	chr17	+	18521716	18522147	True	NR_036647,NM_001037330	chr17,chr17	-,+	CCDC144B,TRIM16L	6834,103254
chr17:18521513-18522502	chr17	-	18730485	18730916	False	NM_001145045,NM_002767	chr17,chr17	-,+	ZNF286B,PRPSAP2	-144913,30575
chr21:43914968-43915302	chr21	+	43915114	43915326	True	NM_080860,NM_018964	chr21,chr21	-,+	RSPH1,SLC37A1	1125,4415
chr3:187085767-187086291	chr3	+	187086003	187086291	True	NM_022147,NM_001031849	chr3,chr3	+,-	RTP4,MASP1	-19,-76193
chr12:51418666-51418958	chr12	+	51418665	51418985	True	NM_000617,NM_001174128,NM_001174129,NM_001174125,NM_001174126,NM_001174127,NM_001024668,NR_033422,NR_033421	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,-,-,-,-,-,+,-,-	SLC11A2,SLC11A2,SLC11A2,SLC11A2,SLC11A2,SLC11A2,LETMD1,SLC11A2,SLC11A2	1264,1264,989,3123,1264,1264,23098,1264,1264
chr11:84634579-84635204	chr11	+	84634579	84635206	True	NM_001364,NM_001193537	chr11,chr11	-,+	DLG2,TMEM126B	-114,704415
chr5:6447233-6448752	chr5	+	6447232	6448602	True	NM_001145161,NM_032286	chr5,chr5	+,-	UBE2QL1,MED10	133,-68593
chr1:205599085-205600307	chr1	+	205599403	205600259	True	NM_021795,NM_001973,NM_181644	chr1,chr1,chr1	-,-,+	ELK4,ELK4,MFSD4	1791,1791,-61350
chr14:24765266-24765619	chr14	+	24765301	24765575	True	NM_138452,NM_174913,NM_001136050	chr14,chr14,chr14	-,+,-	DHRS1,C14orf21,DHRS1	3141,3522,3514
chr16:31365908-31366140	chr16	+	31365941	31366149	True	NM_000887,NM_005205	chr16,chr16	+,-	ITGAX,COX6A2	359,73650
chr7:71877166-71878035	chr7	+	71877190	71877926	True	NR_001588,NM_031468	chr7,chr7	+,-	SBDSP1,CALN1	422025,138
chr6:154674716-154676713	chr6	+	154675157	154676461	True	NM_015553,NM_001130700,NM_001145287	chr6,chr6,chr6	-,-,+	IPCEF1,IPCEF1,OPRM1	1491,1491,-267578
chr19:859603-860084	chr19	+	859848	860080	True	NM_001972,NM_001928,NM_005481	chr19,chr19,chr19	+,+,-	ELANE,CFD,MED16	-7608,-234,33188
chrX:48769105-48769647	chrX	+	48769160	48769586	True	NM_005660,NM_006875,NM_001167992,NM_001032289,NM_001042498	chrX,chrX,chrX,chrX,chrX	-,-,+,-,-	SLC35A2,PIM2,PQBP1,SLC35A2,SLC35A2	-243,6877,-13436,-227,-47
chr2:48952847-48953323	chr2	+	48952847	48953347	True	NM_000233,NM_006872	chr2,chr2	-,+	LHCGR,GTF2A1L	29583,-107962
chr14:94759741-94760434	chr14	+	94759745	94760484	True	NM_001100607,NM_058237,NM_016186	chr14,chr14,chr14	-,+,-	SERPINA10,PPP4R4,SERPINA10	-149,-119147,-384
chr16:71522838-71523041	chr16	+	71522860	71523064	True	NM_005769,NM_006961	chr16,chr16	+,-	CHST4,ZNF19	36958,240
chr12:56709384-56709713	chr12	+	56709417	56709751	True	NM_014255,NM_001190991,NM_016584	chr12,chr12,chr12	-,-,+	CNPY2,CNPY2,IL23A	427,427,22911
chr19:57335058-57335689	chr19	+	57335135	57335699	True	NM_001146186,NR_023847	chr19,chr19	-,+	PEG3,PEG3-AS1	725,-11339
chrX:73162071-73162705	chrX	+	73162216	73162720	True	NR_001564,NR_024582	chrX,chrX	-,+	XIST,NCRNA00183	-89628,1438
chr12:133614346-133615002	chr12	+	133614387	133615026	True	NM_003428,NM_001164715,NM_001127372	chr12,chr12,chr12	+,-,+	ZNF84,ZNF605,ZNF84	-560,-81495,-458
chr11:76474431-76475486	chr11	+	76474572	76475407	True	NM_015516,NR_024042	chr11,chr11	+,-	TSKU,GUCY2E	18877,-41739
chr13:20735078-20735459	chr13	+	20735077	20735357	True	NM_021954,NM_001190965	chr13,chr13	-,+	GJA3,ZMYM2	98,-202154
chr12:7243912-7244250	chr12	+	7243970	7244288	True	NR_026947,NM_001733	chr12,chr12	+,-	LOC283314,C1R	16615,805
chr17:46178775-46179543	chr17	+	46178962	46179499	True	NM_001127228,NM_152244,NM_006807,NM_013323	chr17,chr17,chr17,chr17	-,+,-,+	CBX1,SNX11,CBX1,SNX11	-79,5420,-402,5447
chr2:39458207-39459934	chr2	+	39458708	39459801	True	NR_037875,NM_001009565	chr2,chr2	+,-	LOC728730,CDKL4	204755,-2035
chr2:43057173-43057679	chr2	+	43057376	43057658	True	NM_020744,NM_012205	chr2,chr2	+,-	MTA3,HAAO	-261756,-37625
chr4:122777789-122778015	chr4	+	122777869	122777933	True	NM_005033,NM_176824	chr4,chr4	+,-	EXOSC9,BBS7	-55451,13773
chr2:11808167-11809208	chr2	+	11808252	11809204	True	NM_012344,NM_145693	chr2,chr2	-,+	NTSR2,LPIN1	1175,77535
chr4:85607381-85608387	chr4	+	85607540	85608102	True	NM_001263,NM_006168	chr4,chr4	+,-	CDS1,NKX6-1	-103543,-188153
chr9:37121725-37122079	chr9	+	37121857	37122115	True	NM_016734,NM_032226	chr9,chr9	-,+	PAX5,ZCCHC7	-87381,-1452
chr19:3934168-3934511	chr19	+	3934251	3934537	True	NM_170678,NR_030367	chr19,chr19	+,-	ITGB1BP3,MIR637	-1201,27023
chrY:27628847-27629335	chrY	+	27628861	27629379	True	NR_002179,NR_001554	chrY,chrY	-,+	TTTY17C,CSPG4P1Y	-297941,-41
chrY:27628847-27629335	chrY	-	26333053	26333571	False	NR_001526,NR_001554	chrY,chrY	+,-	TTTY17A,CSPG4P1Y	297907,41
chr1:213020773-213021840	chr1	+	213020913	213021541	True	NM_001024601,NM_014053,NR_027285,NR_027286	chr1,chr1,chr1,chr1	-,+,-,-	C1orf227,FLVCR1,NCRNA00292,NCRNA00292	4,10055,9990,9990
chr7:55086058-55086428	chr7	+	55086078	55086342	True	NM_201284,NM_005228,NM_014302,NM_201282,NM_201283	chr7,chr7,chr7,chr7,chr7	+,+,-,+,+	EGFR,EGFR,SEC61G,EGFR,EGFR	382,382,-259139,382,382
chr16:87424783-87425349	chr16	+	87424920	87425308	True	NM_022818,NM_024735,NR_024568	chr16,chr16,chr16	+,-,-	MAP1LC3B,FBXO31,FBXO31	492,-7526,450
chr7:117067575-117068210	chr7	+	117067706	117068161	True	NR_023315,NM_000492,NM_130768	chr7,chr7,chr7	-,+,-	ASZ1,CFTR,ASZ1	-129,51855,-129
chr10:38736752-38737407	chr10	+	38737007	38737393	True	NR_027269,NR_024497	chr10,chr10	-,+	SEPT7L,LOC399744	-45227,-19984
chr4:83477290-83478979	chr4	+	83477471	83478786	True	NM_001080506,NM_021204	chr4,chr4	-,+	TMEM150C,ENOPH1	4390,-125803
chr5:176075392-176075732	chr5	+	176075457	176075781	True	NM_003085,NM_130465,NM_012171,NM_001006616	chr5,chr5,chr5,chr5	-,+,+,+	SNCB,TSPAN17,TSPAN17,TSPAN17	-17900,-1120,-1120,-1120
chr10:118032776-118033088	chr10	+	118032820	118033128	True	NM_005264,NM_145793,NM_198515,NM_001145453	chr10,chr10,chr10,chr10	-,-,+,-	GFRA1,GFRA1,C10orf96,GFRA1	48,-1001,50811,-24
chr2:120534416-120535574	chr2	+	120534435	120535581	True	NM_002980,NM_002830	chr2,chr2	-,+	SCTR,PTPN4	-252407,-17286
chr5:150403378-150404225	chr5	+	150403377	150404265	True	NM_002084,NM_006058	chr5,chr5	+,-	GPX3,TNIP1	-3429,56782
chr1:205411699-205412165	chr1	+	205411699	205412134	True	NM_002596,NR_029893	chr1,chr1	+,-	CDK18,MIR135B	61549,5449
chr7:27085239-27086984	chr7	+	27086504	27086857	True	NM_005522,NR_002795	chr7,chr7	-,+	HOXA1,HOXA11-AS1	48829,138169
chr11:3239692-3239961	chr11	+	3239717	3239969	True	NR_027138,NM_001164377	chr11,chr11	+,-	C11orf36,MRGPRG	-206,124
chr10:106095348-106096314	chr10	+	106095507	106096226	True	NM_001008723,NM_033397	chr10,chr10	+,-	CCDC147,ITPRIP	17295,-1844
chr11:65481117-65481485	chr11	+	65481196	65481482	True	NM_182709,NM_006388,NM_182710,NM_032193	chr11,chr11,chr11,chr11	+,+,+,-	KAT5,KAT5,KAT5,RNASEH2C	-1758,-1758,-1758,6977
chrX:48541206-48541804	chrX	+	48541361	48541830	True	NM_013271,NM_000377	chrX,chrX	-,+	PCSK1N,WAS	152180,355
chr13:21345869-21347442	chr13	+	21346434	21347387	True	NM_138284,NM_174928	chr13,chr13	+,-	IL17D,N6AMT2	-69004,720
chrX:57021998-57022522	chrX	+	57022080	57022566	True	NR_027139,NM_001010862,NR_015367	chrX,chrX,chrX	-,-,+	SPIN3,SPIN3,LOC550643	-92,-92,-266413
chr1:77748091-77748369	chr1	+	77748202	77748314	True	NM_174858,NM_012093,NM_005482	chr1,chr1,chr1	+,+,-	AK5,AK5,PIGK	-591,-2,-63070
chr20:57208067-57208466	chr20	+	57208124	57208484	True	NM_153360,NM_001001433	chr20,chr20	-,+	APCDD1L,STX16	-118175,17824
chr8:110346832-110347883	chr8	+	110346921	110347540	True	NM_001193557,NR_036472,NM_020189,NR_036471,NM_001128211,NM_032869	chr8,chr8,chr8,chr8,chr8,chr8	+,+,+,+,-,-	ENY2,ENY2,ENY2,ENY2,NUDCD1,NUDCD1	-420,-420,-420,-420,-4759,-571
chr7:134855849-134856560	chr7	+	134855951	134856558	True	NM_018295,NR_024186,NR_024185,NM_024033	chr7,chr7,chr7,chr7	+,-,-,-	TMEM140,C7orf49,C7orf49,C7orf49	-23243,-419,-419,-419
chr17:80053798-80054076	chr17	+	80053844	80054072	True	NM_004104,NM_212492	chr17,chr17	-,+	FASN,GPS1	2084,-44132
chr22:22083454-22084363	chr22	+	22083909	22084171	True	NM_013313,NM_148176	chr22,chr22	-,+	YPEL1,PPIL2	5950,-63688
chr6:24875264-24875812	chr6	+	24875290	24875729	True	NM_015864,NM_015895	chr6,chr6	-,+	FAM65B,GMNN	1905,-100177
chr1:161233186-161233858	chr1	+	161233315	161233381	True	NM_001077469,NM_001102566	chr1,chr1	-,+	NR1I3,PCP4L1	-25315,-4859
chr12:102130147-102131462	chr12	+	102130511	102131460	True	NM_153694,NM_001177949,NM_001177948,NM_020244	chr12,chr12,chr12,chr12	-,-,-,+	SYCP3,SYCP3,SYCP3,CHPT1	1840,1840,1840,-39153
chr10:74457350-74458854	chr10	+	74457993	74458910	True	NM_138357,NM_006077	chr10,chr10	+,-	CCDC109A,CBARA1	-6168,-72044
chr11:116712772-116714697	chr11	+	116712814	116714485	True	NM_000040,NM_000039	chr11,chr11	+,-	APOC3,APOA1	-12241,-4476
chr11:13985725-13986003	chr11	+	13985734	13985974	True	NM_006108,NM_001177315	chr11,chr11	+,-	SPON1,RRAS2	-1871,394107
chr15:35377034-35378881	chr15	+	35377232	35378570	True	NM_014106,NR_003144	chr15,chr15	-,+	ZNF770,LOC723972	-96735,150956
chr1:46648879-46649130	chr1	+	46648949	46649123	True	NM_017739,NM_005727	chr1,chr1	-,+	POMGNT1,TSPAN1	15048,-8251
chr12:21326850-21328406	chr12	+	21326992	21328230	True	NM_021094,NM_006446	chr12,chr12	-,+	SLCO1A2,SLCO1B1	159652,-42921
chr8:54794080-54794346	chr8	+	54794120	54794298	True	NM_003702,NM_213619	chr8,chr8	+,-	RGS20,ATP6V1H	-729,-38270
chr5:110852785-110854336	chr5	+	110852940	110853994	True	NM_001744,NM_139164	chr5,chr5	+,-	CAMK4,STARD4	-293050,-4783
chr6:137142308-137143709	chr6	+	137142590	137143676	True	NM_000288,NM_005923	chr6,chr6	+,-	PEX7,MAP3K5	25,-28934
chr16:20357534-20358638	chr16	+	20357533	20358342	True	NM_001008389,NM_017888,NM_003361	chr16,chr16,chr16	-,+,-	UMOD,ACSM5,UMOD	5746,62513,5746
chr6:37011432-37012777	chr6	+	37011457	37012677	True	NM_173558,NM_014341	chr6,chr6	+,-	FGD2,MTCH1	-38093,-57508
chr7:94948018-94948355	chr7	+	94948017	94948395	True	NM_145872,NM_000446	chr7,chr7	+,-	ASB4,PON1	166817,5539
chr6:100052663-100053495	chr6	+	100052920	100053382	True	NM_005190,NM_021620	chr6,chr6	-,+	CCNC,PRDM13	-36230,1267
chr11:73876088-73877075	chr11	+	73876248	73876687	True	NM_015531,NM_016147	chr11,chr11	-,+	C2CD3,PPME1	5434,5680
chr12:109026039-109026331	chr12	+	109026111	109026297	True	NM_003006,NM_213595	chr12,chr12	-,+	SELPLG,ISCU	1427,-69869
chr21:47575684-47576718	chr21	+	47575759	47576646	True	NM_001849,NM_006657,NM_206965	chr21,chr21,chr21	+,-,-	COL6A2,FTCD,FTCD	-57777,-278,-278
chr11:4742283-4744212	chr11	+	4742420	4744186	True	NM_030774,NM_152430	chr11,chr11	-,+	OR51E2,OR51E1	-23344,-77315
chr7:129987361-129989197	chr7	+	129987592	129988889	True	NM_001127442,NM_001127441,NM_080385,NM_018718	chr7,chr7,chr7,chr7	+,+,+,-	CPA5,CPA5,CPA5,TSGA14	-3013,-3013,-3013,92015
chr12:56215563-56216497	chr12	+	56215691	56216539	True	NR_026723,NR_026722,NR_036478,NR_036479,NM_032364,NM_033082,NR_036476,NR_036477,NM_014182	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,-,+,+,-,-,+,+,+	SARNP,SARNP,LOC440104,LOC440104,DNAJC14,SARNP,LOC440104,LOC440104,ORMDL2	-4151,-4151,6852,6852,6931,-4151,6852,6852,-3937
chr7:39044402-39045783	chr7	+	39044424	39045666	True	NM_007252,NM_080631	chr7,chr7	+,-	POU6F2,VPS41	-26866,-95624
chr16:27437890-27438619	chr16	+	27437937	27438615	True	NR_037158,NM_021798	chr16,chr16	-,+	LOC283888,IL21R	26149,-37
chr1:225647834-225648112	chr1	+	225647845	225648031	True	NM_194442,NM_001130440	chr1,chr1	-,+	LBR,SRP9	-31288,317483
chr3:172241214-172243002	chr3	+	172241534	172242947	True	NM_018098,NR_033994,NM_003810,NM_001190942,NM_001190943	chr3,chr3,chr3,chr3,chr3	+,-,-,-,-	ECT2,TNFSF10,TNFSF10,TNFSF10,TNFSF10	229350,-237,-237,-237,-269
chr2:27010541-27011634	chr2	+	27010672	27011524	True	NM_001029881,NM_001042426,NM_001809	chr2,chr2,chr2	-,+,+	CIB4,CENPA,CENPA	-146461,-1840,-1841
chr1:161388931-161390318	chr1	+	161388982	161390059	True	NM_001136219,NM_001013625	chr1,chr1	+,-	FCGR2A,C1orf192	85145,-51318
chr20:62665796-62666077	chr20	+	62665934	62666100	True	NR_027687,NR_027686,NM_018419	chr20,chr20,chr20	+,+,-	NCRNA00176,NCRNA00176,SOX18	-288,-288,14929
chr20:56965730-56966813	chr20	+	56965783	56966501	True	NM_004738,NR_003505,NR_036633,NM_001195677	chr20,chr20,chr20,chr20	+,-,+,+	VAPB,PPP4R1L,VAPB,VAPB	-1659,-81288,-1659,-1659
chr19:2724278-2724723	chr19	+	2724284	2724577	True	NM_145173,NM_003249	chr19,chr19	-,+	DIRAS1,THOP1	-2894,60928
chr17:8867829-8868284	chr17	+	8867850	8868226	True	NM_004822,NM_001142633	chr17,chr17	+,-	NTN1,PIK3R5	56632,848
chr11:31834232-31834453	chr11	+	31834319	31834427	True	NM_001127612,NM_000280,NM_001604,NR_033971	chr11,chr11,chr11,chr11	-,-,-,+	PAX6,PAX6,PAX6,DKFZp686K1684	5132,-1440,-1440,3686
chr12:58012085-58012986	chr12	+	58012157	58013035	True	NM_001111270,NM_182947,NM_001478,NM_133489	chr12,chr12,chr12,chr12	+,+,-,+	ARHGEF25,ARHGEF25,B4GALNT1,SLC26A10	-8252,-6997,14000,657
chr7:20881371-20882305	chr7	+	20881847	20882330	True	NM_198956,NR_026673	chr7,chr7	-,+	SP8,RPL23P8	-55339,-14981
chr10:122216086-122216309	chr10	+	122216098	122216332	True	NM_001030059,NR_033850	chr10,chr10	+,-	PPAPDC1A,LOC283089	133,394409
chr3:138447544-138448014	chr3	+	138447787	138447864	True	NM_018147,NM_006219	chr3,chr3	+,-	FAIM,PIK3CB	-119928,30378
chr10:29582205-29582825	chr10	+	29582320	29582590	True	NR_030335,NM_032517	chr10,chr10	-,+	MIR604,LYZL1	251486,-4383
chr17:56768510-56768749	chr17	+	56768536	56768750	True	NM_031272,NM_002876,NM_198393,NM_001201457,NM_058216	chr17,chr17,chr17,chr17,chr17	-,+,-,-,+	TEX14,RAD51C,TEX14,TEX14,RAD51C	716,1212,716,716,1212
chr11:65235790-65236074	chr11	+	65235871	65235949	True	NR_030343,NM_182556	chr11,chr11	+,-	MIR612,SLC25A45	-24001,-85729
chr20:57613498-57615438	chr20	+	57613659	57615484	True	NR_037930,NR_037929,NM_006886,NM_016045,NM_001001977,NM_030773	chr20,chr20,chr20,chr20,chr20,chr20	-,-,-,-,-,+	SLMO2-ATP5E,SLMO2-ATP5E,ATP5E,SLMO2,ATP5E,TUBB1	2468,2468,-6259,2468,-6237,-19401
chr16:30104674-30105206	chr16	+	30104873	30105254	True	NM_002720,NM_004608,NM_001145524,NM_031477	chr16,chr16,chr16,chr16	+,-,-,-	PPP4C,TBX6,YPEL3,YPEL3	-17540,-1668,2333,2317
chr9:139778934-139780074	chr9	+	139779373	139780009	True	NM_153200,NM_021138	chr9,chr9	-,+	EDF1,TRAF2	-18635,955
chrX:148668173-148668572	chrX	+	148668283	148668509	True	NM_016153,NM_001164415,NM_005365,NM_001171909,NM_001080790	chrX,chrX,chrX,chrX,chrX	-,-,-,+,-	HSFX1,HSFX2,MAGEA9,CXorf40A,MAGEA9B	8515,8515,650,-42268,657
chrX:148668173-148668572	chrX	-	148864199	148864425	False	NM_016153,NM_001164415,NM_032508,NM_005365,NM_001080790	chrX,chrX,chrX,chrX,chrX	+,+,-,+,+	HSFX1,HSFX2,TMEM185A,MAGEA9,MAGEA9B	-8524,-8524,-150712,-650,-657
chr14:102225667-102225915	chr14	+	102225669	102225961	True	NM_001161725,NM_001161726,NR_031649	chr14,chr14,chr14	+,+,-	PPP2R5C,PPP2R5C,MIR1247	2173,2173,-198910
chr17:79007508-79007713	chr17	+	79007599	79007741	True	NM_001144888,NR_026857,NM_017450,NM_017451,NM_006340	chr17,chr17,chr17,chr17,chr17	+,-,+,+,+	BAIAP2,FLJ90757,BAIAP2,BAIAP2,BAIAP2	1205,828,1205,1205,1205
chrX:106157474-106158754	chrX	+	106157477	106158626	True	NM_001171095,NM_138382,NM_020384	chrX,chrX,chrX	+,-,+	CLDN2,RIPPLY1,CLDN2	2963,-10916,4979
chr12:130649263-130649718	chr12	+	130649429	130649616	True	NR_033834,NM_007197	chr12,chr12	-,+	FLJ31485,FZD10	-3206,-2476
chrY:24039614-24040584	chrY	+	24040119	24040197	True	NM_001006120,NM_005058,NR_001527,NM_001006121,NM_001006118	chrY,chrY,chrY,chrY,chrY	-,-,+,-,-	RBMY1D,RBMY1A1,TTTY6,RBMY1B,RBMY1E	488,494,250914,528,488
chrY:24039614-24040584	chrY	+	24063660	24063738	False	NM_001006120,NM_001006121,NR_001527,NM_001006118	chrY,chrY,chrY,chrY	-,-,+,-	RBMY1D,RBMY1B,TTTY6,RBMY1E	488,528,227373,488
chrY:24039614-24040584	chrY	-	23673699	23673777	False	NM_001006120,NM_005058,NR_001537,NM_001006121,NM_001006118	chrY,chrY,chrY,chrY,chrY	+,+,-,+,+	RBMY1D,RBMY1A1,TTTY13,RBMY1B,RBMY1E	-488,-494,82835,-528,-488
chrY:24039614-24040584	chrY	-	23697240	23697318	False	NM_001006120,NM_005058,NR_001537,NM_001006121	chrY,chrY,chrY,chrY	+,+,-,+	RBMY1D,RBMY1A1,TTTY13,RBMY1B	-488,-494,59294,-528
chr7:64764958-64765202	chr7	+	64764958	64765111	True	NM_001007253,NM_007139	chr7,chr7	-,+	ERV3,ZNF92	-297834,73656
chr7:116962355-116963120	chr7	+	116962370	116963110	True	NR_002332,NR_024047,NM_003391	chr7,chr7,chr7	+,-,-	ST7OT3,WNT2,WNT2	-139686,283,283
chr7:98974656-98975026	chr7	+	98974672	98975031	True	NM_005720,NM_014891	chr7,chr7	+,-	ARPC1B,PDAP1	-2425,31324
chr8:104430278-104431361	chr8	+	104430380	104430948	True	NM_015420,NM_030780	chr8,chr8	+,-	DCAF13,SLC25A32	-3497,-2912
chr13:113813304-113813691	chr13	+	113813496	113813592	True	NM_001127202,NM_003891	chr13,chr13	-,+	PCID2,PROZ	49487,-579
chr6:107082361-107083668	chr6	+	107082657	107083394	True	NM_032730,NM_018292	chr6,chr6	-,+	RTN4IP1,QRSL1	-5284,-5267
chr3:138034832-138035750	chr3	+	138035005	138035799	True	NM_012219,NM_178130	chr3,chr3	+,-	MRAS,TXNDC6	30825,12979
chr1:115296135-115296700	chr1	+	115296135	115296670	True	NM_007158,NM_003176,NM_001007553,NM_001130523	chr1,chr1,chr1,chr1	-,+,-,-	CSDE1,SYCP1,CSDE1,CSDE1	4017,100784,4017,4064
chr7:39057575-39057990	chr7	+	39057584	39058026	True	NM_007252,NM_080631	chr7,chr7	+,-	POU6F2,VPS41	-40033,-108784
chr18:709264-709492	chr18	+	709354	709506	True	NM_001126123,NM_001071,NM_017512,NM_202758	chr18,chr18,chr18,chr18	-,+,-,-	ENOSF1,TYMS,ENOSF1,ENOSF1	3206,-51801,3206,3061
chr1:209818781-209819546	chr1	+	209819102	209819584	True	NM_001127641,NM_001017402,NM_015714,NM_000228	chr1,chr1,chr1,chr1	-,-,+,-	LAMB3,LAMB3,G0S2,LAMB3	6140,5145,29085,6286
chr2:44064034-44065054	chr2	+	44064184	44065042	True	NM_022436,NM_022437	chr2,chr2	-,+	ABCG5,ABCG8	966,1060
chrX:89176269-89177105	chrY	+	3447082	3447250	False	NM_003140,NM_139214	chrY,chrY	-,+	SRY,TGIF2LY	-791290,-7
chrX:89176269-89177105	chrX	+	89176697	89177097	True	NM_138960,NM_004538	chrX,chrX	+,-	TGIF2LX,NAP1L3	8,3751635
chr12:6755284-6756014	chr12	+	6755440	6756030	True	NM_001164094,NM_032489	chr12,chr12	+,-	COPS7A,ACRBP	77119,600
chr15:51634274-51634753	chr15	+	51634475	51634785	True	NM_000103,NM_181789,NM_031226	chr15,chr15,chr15	-,+,-	CYP19A1,GLDN,CYP19A1	-3680,-814,-3680
chr20:57464528-57464778	chr20	+	57464558	57464766	True	NM_001077489,NM_001077488,NM_000516,NR_002785,NR_003259,NM_080426	chr20,chr20,chr20,chr20,chr20,chr20	+,+,+,-,+,+	GNAS,GNAS,GNAS,GNAS-AS1,GNAS,GNAS	1659,1659,1659,-38600,-429,1659
chr12:27539721-27541511	chr12	+	27539831	27541359	True	NM_001080406,NM_020183	chr12,chr12	-,+	C12orf71,ARNTL2	-304376,-53894
chr13:41053236-41053507	chr13	+	41053243	41053497	True	NR_024505,NR_024507,NR_024506,NM_014252	chr13,chr13,chr13,chr13	-,-,-,+	LOC646982,LOC646982,LOC646982,SLC25A15	1696,1696,1696,310049
chrX:13358695-13360084	chrX	+	13358716	13359825	True	NM_001167890,NM_001135995	chrX,chrX	+,-	EGFL6,ATXN3L	227868,-20198
chr2:20786226-20787683	chr2	+	20786661	20787383	True	NM_022460,NM_182828	chr2,chr2	-,+	HS1BP3,GDF7	63531,79040
chr8:82633520-82633758	chr8	+	82633633	82633747	True	NM_001170797,NM_001170796,NM_024699,NR_033196,NR_033194,NR_033195,NR_033193,NM_152284	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,-,-,-,+	ZFAND1,ZFAND1,ZFAND1,ZFAND1,ZFAND1,ZFAND1,ZFAND1,CHMP4C	-94,-94,-94,-94,-94,-94,-94,10940
chr5:219070-219279	chr5	+	219092	219296	True	NM_004168,NM_145265	chr5,chr5	+,-	SDHA,CCDC127	-787,-795
chr19:33852271-33852538	chr19	+	33852361	33852563	True	NM_001806,NM_004364	chr19,chr19	+,-	CEBPG,CEBPA	12045,-58931
chr19:53697269-53698000	chr19	+	53697350	53698006	True	NM_024733,NM_173856	chr19,chr19	-,+	ZNF665,VN1R2	-731,63538
chr12:109459955-109460297	chr12	+	109460059	109460319	True	NM_032663,NM_018711	chr12,chr12	+,-	USP30,SVOP	30060,-1214
chrX:100550666-100551052	chrX	+	100550800	100551011	True	NM_024885,NM_001939,NM_001168474	chrX,chrX,chrX	-,+,-	TAF7L,DRP2,TAF7L	-2741,-75925,-4475
chr4:122720032-122721719	chr4	+	122720387	122721563	True	NM_005033,NM_001237,NM_001034194	chr4,chr4,chr4	+,-,+	EXOSC9,CCNA2,EXOSC9	908,23575,908
chr20:33135023-33135823	chr20	+	33135032	33135870	True	NM_080476,NM_181509	chr20,chr20	-,+	PIGU,MAP1LC3A	129269,-391
chr15:99195160-99195909	chr15	+	99195165	99195740	True	NM_182562,NM_000875	chr15,chr15	-,+	FAM169B,IGF1R	-137554,-2456
chr11:73659254-73660908	chr11	+	73659410	73660666	True	NM_153614,NM_003355	chr11,chr11	+,-	DNAJB13,UCP2	697,33273
chr9:33937866-33938514	chr9	+	33937923	33938522	True	NR_003685,NR_003690	chr9,chr9	-,+	SNORD121A,SNORD121B	14382,-3698
chr5:96432030-96433595	chr5	+	96432257	96433537	True	NM_153234,NM_175920	chr5,chr5	-,+	LIX1,LNPEP	45033,-138153
chr6:71667118-71667489	chr6	+	71667228	71667518	True	NM_080742,NM_021940	chr6,chr6	-,+	B3GAT2,SMAP1	-440,-289800
chr1:205739952-205740625	chr1	+	205740001	205740671	True	NM_003929,NM_001135662,NM_001135663,NM_001135664,NM_181644	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	RAB7L1,RAB7L1,RAB7L1,RAB7L1,MFSD4	3989,3989,3989,3989,-201950
chr11:18747146-18748349	chr11	+	18747278	18748339	True	NM_153347,NM_173588	chr11,chr11	+,-	TMEM86A,IGSF22	-26980,133
chr1:145726752-145727787	chr1	+	145726780	145727698	True	NM_002614,NM_001201326,NM_001201325,NM_007053	chr1,chr1,chr1,chr1	+,+,+,-	PDZK1,PDZK1,PDZK1,CD160	31,31,31,-11215
chr8:119966224-119967262	chr8	+	119966224	119967207	True	NM_002546,NM_006438	chr8,chr8	-,+	TNFRSF11B,COLEC10	-1841,112216
chr13:37680391-37681771	chr13	+	37680641	37681744	True	NM_145203,NM_181503	chr13,chr13	-,+	CSNK1A1L,EXOSC8	-840,-106021
chr17:48847393-48848649	chr17	+	48847411	48848620	True	NR_024626,NM_016424	chr17,chr17	-,+	C17orf73,LUC7L3	-2493,-50537
chr12:94543522-94543822	chr12	+	94543527	94543817	True	NM_001042399,NM_005761	chr12,chr12	-,+	CCDC41,PLXNC1	309997,-1079
chr10:51830645-51831156	chr10	+	51830829	51831077	True	NM_018232,NM_001005751,NM_001143974	chr10,chr10,chr10	+,+,-	FAM21B,FAM21A,ASAH2	6808,-3204,177343
chr10:51830645-51831156	chr10	+	46225831	46226079	False	NM_174890,NM_015262,NM_001169106,NM_001169107	chr10,chr10,chr10,chr10	-,+,+,+	ANUBL1,FAM21C,FAM21C,FAM21C	-57580,-3242,-3242,-3242
chr10:23630820-23631314	chr10	+	23631204	23631350	True	NM_153714,NM_001145373	chr10,chr10	-,+	C10orf67,OTUD1	2472,96847
chr4:103266447-103266650	chr4	+	103266451	103266669	True	NM_001165412,NM_022154,NM_001135147,NM_001135146	chr4,chr4,chr4,chr4	+,-,-,-	NFKB1,SLC39A8,SLC39A8,SLC39A8	155816,-103,-41,36
chr12:106976809-106977491	chr12	+	106977102	106977462	True	NM_006825,NM_213594	chr12,chr12	-,+	CKAP4,RFX4	-335389,-120
chr6:42421040-42421282	chr6	+	42421217	42421315	True	NM_001184801,NM_033502	chr6,chr6	+,-	UBR2,TRERF1	110444,-1434
chr4:155411924-155412139	chr4	+	155411923	155412173	True	NM_001142552,NM_001142553,NM_001184741	chr4,chr4,chr4	-,-,+	DCHS2,DCHS2,FGB	754,807,71958
chr10:120824409-120825550	chr10	+	120824628	120825303	True	NR_002917,NM_199461	chr10,chr10	-,+	SNORA19,NANOS1	-4978,-35451
chr3:99356287-99356883	chr3	+	99356334	99356784	True	NM_020351,NM_014890,NM_001850	chr3,chr3,chr3	+,-,+	COL8A1,FILIP1L,COL8A1	669,238312,669
chr17:73775610-73777197	chr17	+	73775704	73776990	True	NM_005324,NM_001080419	chr17,chr17	-,+	H3F3B,UNK	-21,3690
chr22:29142223-29144027	chr22	+	29142414	29143852	True	NM_007194,NM_145862,NM_001005735,NM_172002	chr22,chr22,chr22,chr22	-,-,-,+	CHEK2,CHEK2,CHEK2,HSCB	-4592,-4592,-4592,-4422
chr15:48936175-48936789	chr15	+	48936262	48936826	True	NM_014335,NM_000138	chr15,chr15	+,-	EID1,FBN1	233463,1209
chr3:191045004-191046767	chr3	+	191045502	191046788	True	NM_178335,NM_198152,NM_174908	chr3,chr3,chr3	+,-,+	CCDC50,UTS2D,CCDC50	85,1587,85
chr16:87525414-87525636	chr16	+	87525469	87525547	True	NM_022818,NM_015144	chr16,chr16	+,-	MAP1LC3B,ZCCHC14	-99719,-9
chr19:50866075-50867432	chr19	+	50866127	50867278	True	NM_007121,NM_004851	chr19,chr19	+,-	NR1H2,NAPSA	12406,1703
chr16:2908611-2908833	chr16	+	2908610	2908768	True	NM_001142499,NM_022119	chr16,chr16	+,-	FLYWCH2,PRSS22	24427,-439
chr1:2486381-2486721	chr1	+	2486625	2486695	True	NR_037844,NR_026927,NM_003820	chr1,chr1,chr1	-,-,+	LOC100133445,LOC115110,TNFRSF14	1805,-2341,1109
chr3:33880635-33882610	chr3	+	33881186	33882185	True	NM_015097,NR_027867	chr3,chr3	-,+	CLASP2,PDCD6IP	-121338,-11119
chr9:124328842-124329094	chr9	+	124328927	124329141	True	NR_003191,NM_032552	chr9,chr9	-,+	GGTA1,DAB2IP	-66621,257
chr18:11636594-11637271	chr18	+	11637232	11637292	True	NM_023075,NM_182978	chr18,chr18	-,+	MPPE1,GNAL	271399,51843
chr2:42273645-42274496	chr2	+	42273756	42274455	True	NM_138370,NM_004718	chr2,chr2	+,-	PKDCC,COX7A2L	705,313951
chr6:2634185-2634390	chr6	+	2634185	2634369	True	NM_152554,NM_020135	chr6,chr6	-,+	C6orf195,WRNIP1	981,131296
chr4:185138244-185138900	chr4	+	185138359	185138881	True	NM_020225,NM_153343	chr4,chr4	+,-	STOX2,ENPP6	-311901,283
chr4:119200190-119200497	chr4	+	119200270	119200535	True	NR_003584,NR_034011,NR_002963,NR_034010,NM_003619	chr4,chr4,chr4,chr4,chr4	+,+,+,+,-	SNHG8,SNHG8,SNORA24,SNHG8,PRSS12	-404,-404,-3,-404,73437
chr10:98115517-98116675	chr10	+	98115628	98116668	True	NM_033207,NM_001040102,NM_001040103,NM_004088	chr10,chr10,chr10,chr10	-,-,-,+	OPALIN,OPALIN,OPALIN,DNTT	2475,2475,2475,-51597
chr2:85763263-85765066	chr2	+	85763574	85765064	True	NM_005911,NM_000821	chr2,chr2	+,-	MAT2A,GGCX	1223,23643
chr1:27019878-27020466	chr1	+	27020073	27020471	True	NM_018066,NM_139135,NM_006015	chr1,chr1,chr1	-,+,+	GPN2,ARID1A,ARID1A	196448,2050,2050
chr4:155289196-155289759	chr4	+	155289224	155289544	True	NM_017639,NM_001184741	chr4,chr4	-,+	DCHS2,FGB	22959,194587
chr4:152333927-152335361	chr4	+	152334229	152335107	True	NM_001128923,NM_001109977	chr4,chr4	-,+	SH3D19,FAM160A1	-186569,-3898
chr12:128054210-128055511	chr12	+	128054256	128055551	True	NR_033970,NR_033987	chr12,chr12	-,+	LOC440117,FLJ37505	-695020,310610
chr1:197883226-197883553	chr1	+	197883233	197883523	True	NM_001014434,NM_001195216,NM_020204	chr1,chr1,chr1	+,-,+	LHX9,DENND1B,LHX9	-1649,-138610,2993
chr17:18544643-18545840	chr17	+	18544832	18545807	True	NM_001037330,NM_001039397	chr17,chr17	+,-	TRIM16L,TBC1D28	79594,1983
chr17:18544643-18545840	chr17	-	15637493	15637543	False	NM_006470,NM_178571	chr17,chr17	-,+	TRIM16,TBC1D26	-51300,-1953
chr6:112045051-112045380	chr6	+	112045064	112045401	True	NR_034109,NM_153047	chr6,chr6	+,-	LOC643749,FYN	-240440,-3799
chr22:42373128-42373397	chr22	+	42373159	42373433	True	NM_024053,NM_145733,NM_019106	chr22,chr22,chr22	-,+,+	CENPM,SEPT3,SEPT3	-30011,-279,-279
chr15:83735604-83735842	chr15	+	83735668	83735786	True	NM_001011885,NM_001144903,NM_025238	chr15,chr15,chr15	-,+,-	BTBD1,TM6SF1,BTBD1	370,40537,370
chr9:100461380-100461754	chr9	+	100461419	100461779	True	NM_000380,NR_027302,NM_002486	chr9,chr9,chr9	-,-,+	XPA,XPA,NCBP1	-1728,-1728,-65765
chr9:130370611-130370829	chr9	+	130370623	130370705	True	NM_003165,NM_001032221,NM_001035534	chr9,chr9,chr9	+,+,-	STXBP1,STXBP1,FAM129B	3780,3780,-29355
chr15:66162036-66162257	chr15	+	66162047	66162195	True	NM_004663,NM_005848	chr15,chr15	+,-	RAB11A,DENND4A	-302,-77416
chr5:150084962-150085388	chr5	+	150085012	150085445	True	NM_018047,NM_133371	chr5,chr5	-,+	RBM22,MYOZ3	-4343,-44659
chr11:62035998-62036871	chr11	+	62036013	62036909	True	NM_002411,NM_206998	chr11,chr11	+,-	SCGB2A2,SCGB1D4	720,29677
chr18:55287169-55288525	chr18	+	55287326	55288477	True	NM_004852,NM_004539	chr18,chr18	+,-	ONECUT2,NARS	-184461,751
chr8:21834323-21834811	chr8	+	21834547	21834780	True	NM_003974,NM_182795	chr8,chr8	-,+	DOK2,NPM2	-63342,47573
chr14:94393251-94393495	chr14	+	94393261	94393541	True	NM_138344,NR_027004	chr14,chr14	+,-	FAM181A,C14orf86	-8054,-543
chr9:77643936-77644244	chr9	+	77644099	77644240	True	NM_012383,NM_152420	chr9,chr9	+,-	OSTF1,C9orf41	59157,-789
chr6:49991165-49993164	chr6	+	49991223	49993112	True	NM_001037497,NM_001037728,NM_001145652	chr6,chr6,chr6	-,-,+	DEFB110,DEFB110,C6orf141	-1529,-1529,-473174
chr14:19412068-19412375	chr22	-	16414984	16415245	False	NM_001005239,NR_001591	chr22,chr22	-,+	OR11H1,psiTPTE22	34612,667555
chr14:19412068-19412375	chr14	+	19412146	19412407	True	NM_001145442,NM_001013354	chr14,chr14	-,+	POTEM,OR11H12	607920,-34606
chr14:19412068-19412375	chr14	-	20147366	20147548	False	NM_001197287,NM_172194	chr14,chr14	-,+	OR11H2,OR4Q3	34996,68038
chr19:9725004-9726383	chr19	+	9725308	9725965	True	NM_001048241,NM_152289	chr19,chr19	+,-	UBL5,ZNF561	212602,6007
chr15:78372428-78374120	chr15	+	78372470	78374056	True	NM_015079,NM_001101404,NM_144572	chr15,chr15,chr15	-,+,-	TBC1D2B,SH2D7,TBC1D2B	-2476,10870,-2476
chr14:93211183-93212250	chr14	+	93211322	93212158	True	NM_005606,NM_005113,NM_001008530	chr14,chr14,chr14	-,+,-	LGMN,GOLGA5,LGMN	2940,48491,2940
chr6:10723093-10723322	chr6	+	10723097	10723285	True	NM_001165258,NR_026736,NM_016462	chr6,chr6,chr6	+,-,+	TMEM14C,C6orf52,TMEM14C	0,-28067,0
chr20:57426052-57426624	chr20	+	57426118	57426602	True	NM_001077490,NM_080425,NR_002785	chr20,chr20,chr20	+,+,-	GNAS,GNAS,GNAS-AS1	1433,1433,-160
chr6:15003260-15003842	chr6	+	15003438	15003871	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	242655,659473
chr12:80885969-80886888	chr12	+	80886002	80886901	True	NR_030348,NM_001145026	chr12,chr12	-,+	MIR617,PTPRQ	339568,-47933
chr12:9601250-9602243	chr12	+	9601358	9602083	True	NR_033399,NR_024374	chr12,chr12	-,+	DDX12,LOC642846	-590,-165156
chr16:67194469-67194865	chr16	+	67194628	67194756	True	NM_001185058,NM_001040667,NM_001538,NM_033309,NM_003789,NM_018378	chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,-,-,+	NOL3,HSF4,HSF4,B3GNT9,TRADD,FBXL8	9648,2531,2531,-9726,-816,-790
chr19:6481830-6482319	chr19	+	6482009	6482313	True	NM_174881,NM_024898	chr19,chr19	+,-	CRB3,DENND1C	-17800,-211
chr7:138352433-138353503	chr7	+	138352449	138353414	True	NM_174959,NM_001085429	chr7,chr7	-,+	SVOPL,TMEM213	-3480,129324
chr21:40032689-40032911	chr21	+	40032719	40032911	True	NM_005239,NM_004449,NM_001136154	chr21,chr21,chr21	+,-,-	ETS2,ERG,ERG	144937,843,843
chr7:142581277-142582075	chr7	+	142581289	142581905	True	NM_004445,NM_018646	chr7,chr7	+,-	EPHB6,TRPV6	-28548,1622
chr20:30129138-30130733	chr20	+	30129583	30130781	True	NM_001037500,NR_003677	chr20,chr20	-,+	DEFB124,PSIMCT-1	-68767,4403
chrX:152987884-152989275	chrX	+	152987892	152989077	True	NM_001139441,NM_001139457,NM_000033,NM_005745,NR_024450	chrX,chrX,chrX,chrX,chrX	-,-,+,-,-	BCAP31,BCAP31,ABCD1,BCAP31,BCAP31	555,522,1245,811,1174
chr15:73734543-73735380	chr15	+	73734858	73735410	True	NM_001042367,NM_005477	chr15,chr15	+,-	C15orf60,HCN4	88,-73253
chr16:1287581-1289009	chr16	+	1288496	1288966	True	NM_024164,NM_003294	chr16,chr16	-,+	TPSB2,TPSAB1	-8311,1711
chr12:108717927-108718728	chr12	+	108717936	108718760	True	NM_001142345,NM_007076	chr12,chr12	-,+	CMKLR1,FICD	-3497,190290
chr7:116166256-116166601	chr7	+	116166385	116166625	True	NR_002330,NM_001753,NM_001172896,NM_001172897,NM_001172895	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	ST7OT1,CAV1,CAV1,CAV1,CAV1	427813,-1597,-89,-24,-1373
chrX:6450538-6452072	chrX	+	6450597	6451821	True	NM_000351,NM_016379	chrX,chrX	+,-	STS,VCX3A	685650,1388
chrX:6450538-6452072	chrX	+	8136950	8137014	False	NR_030380,NM_016378	chrX,chrX	+,-	MIR651,VCX2	-41997,2344
chrX:6450538-6452072	chrX	-	7812740	7812804	False	NM_013452,NM_004650	chrX,chrX	+,-	VCX,PNPLA4	-2488,82723
chr8:24772265-24772744	chr8	+	24772275	24772781	True	NM_005382,NM_006158,NM_001105541	chr8,chr8,chr8	+,-,+	NEFM,NEFL,NEFM	-1052,41400,129
chr17:26634441-26635218	chr17	+	26634444	26635234	True	NM_014573,NR_028334	chr17,chr17	+,-	TMEM97,FLJ40504	10886,-36
chr5:89771821-89773223	chr5	+	89771954	89773199	True	NM_006467,NM_203406	chr5,chr5	+,-	POLR3G,MBLAC2	-1324,-1369
chr17:8078596-8079121	chr17	+	8078681	8079142	True	NM_032354,NM_183065,NR_037447	chr17,chr17,chr17	-,-,+	TMEM107,TMEM107,MIR3676	622,622,11350
chr19:50318691-50319188	chr19	+	50319021	50319093	True	NM_025129,NR_033269,NM_001171937,NM_030973	chr19,chr19,chr19,chr19	-,-,-,+	FUZ,FUZ,FUZ,MED25	-2454,-2454,-2454,2442
chr22:24368497-24369063	chr22	+	24368784	24369032	True	NM_001144931,NM_000853	chr22,chr22	+,-	LOC391322,GSTT1	4084,15302
chr17:71257176-71257624	chr17	+	71257221	71257511	True	NM_001129885,NM_017941	chr17,chr17	-,+	CPSF4L,C17orf80	558,-28496
chr3:40564975-40566262	chr3	+	40565295	40565980	True	NR_033965,NM_001098414,NM_198484	chr3,chr3,chr3	-,+,+	FLJ33065,ZNF621,ZNF621	-214106,395,395
chr8:104511791-104511991	chr8	+	104511904	104511988	True	NM_001100117,NM_030780	chr8,chr8	+,-	RIMS2,SLC25A32	987,-84436
chr18:29783725-29784279	chr18	+	29783982	29784302	True	NM_005925,NM_014939	chr18,chr18	+,-	MEP1B,TRAPPC8	-14047,-260891
chr3:125576725-125577709	chr3	+	125577149	125577767	True	NR_024250,NR_031687	chr3,chr3	+,-	LOC100125556,MIR548I1	57676,-67754
chr3:125576725-125577709	chr3	-	75530126	75530176	False	NR_031714,NR_024241	chr3,chr3	+,-	MIR1324,FAM86DP	149737,-45860
chr12:54121500-54122182	chr12	+	54121568	54122223	True	NR_026554,NM_001143682,NM_020898,NM_017410	chr12,chr12,chr12,chr12	-,-,-,+	CALCOCO1,CALCOCO1,CALCOCO1,HOXC13	-261,-261,-261,210352
chr1:98381907-98382370	chr1	+	98382104	98382348	True	NM_000110,NM_001160301,NM_015976	chr1,chr1,chr1	-,-,+	DPYD,DPYD,SNX7	4317,4317,744887
chr1:190444004-190445110	chr1	+	190444167	190445107	True	NM_199051,NR_033922	chr1,chr1	-,+	FAM5C,LOC440704	1702,148912
chr6:89825927-89826213	chr6	+	89825936	89826197	True	NM_001010853,NM_080743	chr6,chr6	+,-	PM20D2,SRSF12	29571,1666
chr19:47250954-47251475	chr19	+	47251012	47251382	True	NM_013403,NM_001039877,NM_001039885,NM_024301	chr19,chr19,chr19,chr19	-,-,+,+	STRN4,STRN4,FKRP,FKRP	-1292,-1292,-1760,-1760
chr4:40165540-40166959	chr4	+	40165540	40166575	True	NM_004310,NR_027277	chr4,chr4	+,-	RHOH,LOC344967	31951,-106721
chr6:109975693-109976722	chr6	+	109975877	109976753	True	NM_001145128,NM_014845	chr6,chr6	-,+	AKD1,FIG4	35718,35670
chr19:45150527-45151310	chr19	+	45150580	45151246	True	NM_006505,NM_001135770,NM_001135769,NM_001135768,NR_027754	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	PVR,PVR,PVR,PVR,CEACAM22P	-3533,-3533,-3533,-3533,-90430
chr8:143696424-143696847	chr8	+	143696429	143696747	True	NM_015193,NR_033343	chr8,chr8	-,+	ARC,PSCA	-596,54978
chr17:37617574-37617885	chr17	+	37617595	37617787	True	NM_004774,NM_016507,NM_015083	chr17,chr17,chr17	-,+,+	MED1,CDK12,CDK12	-10068,17,17
chr2:79739764-79739970	chr2	+	79739771	79739831	True	NM_001164883,NM_004389,NR_036231	chr2,chr2,chr2	+,+,-	CTNNA2,CTNNA2,MIR4264	228,228,136704
chr9:36137784-36138670	chr9	+	36137787	36138583	True	NM_001190383,NM_022343	chr9,chr9	-,+	GNE,GLIPR2	119964,-1096
chr20:2359201-2359795	chr20	+	2359294	2359792	True	NR_003684,NM_198994	chr20,chr20	-,+	SNORD119,TGM6	83951,1761
chr17:34842796-34843357	chr17	+	34842997	34843287	True	NM_004773,NM_001040282	chr17,chr17	+,-	ZNHIT3,TBC1D3G	-575,-34894
chr1:202114485-202114743	chr1	+	202114539	202114673	True	NM_004767,NM_138795,NR_002930	chr1,chr1,chr1	+,-,+	GPR37L1,ARL8A,PTPRVP	-22561,-673,22505
chr1:21059495-21060844	chr1	+	21059703	21060851	True	NM_001103160,NM_001103161,NM_032409	chr1,chr1,chr1	-,-,+	SH2D5,SH2D5,PINK1	-570,-570,-99806
chr1:26485334-26485836	chr1	+	26485379	26485859	True	NM_024869,NM_032588	chr1,chr1	+,-	GRRP1,TRIM63	-39,-91258
chr16:57730377-57731578	chr16	+	57730471	57731616	True	NM_001130099,NM_032269	chr16,chr16	-,+	KIFC3,CCDC135	100363,-1809
chr10:15000263-15000615	chr10	+	15000424	15000621	True	NM_001080836,NM_001033858,NM_022487,NM_001033857,NM_001033855	chr10,chr10,chr10,chr10,chr10	+,-,-,-,-	MEIG1,DCLRE1C,DCLRE1C,DCLRE1C,DCLRE1C	816,-4330,-4330,-4330,-4330
chr15:80188763-80189005	chr15	+	80188763	80188939	True	NM_006441,NM_001199758,NR_028330,NR_037654	chr15,chr15,chr15,chr15	-,-,+,-	MTHFS,MTHFS,C15orf37,MTHFS	502,738,26173,450
chr22:24324014-24324219	chr22	+	24324087	24324223	True	NM_001355,NM_000854,NM_001084392	chr22,chr22,chr22	-,+,-	DDT,GSTT2,DDT	-2068,-1825,-7407
chr22:24324014-24324219	chr22	-	24301483	24301619	False	NM_000854,NM_001080843,NM_001084393	chr22,chr22,chr22	-,-,+	GSTT2,GSTT2B,DDTL	1825,1800,7406
chr8:91030676-91031571	chr8	+	91030769	91031475	True	NM_002485,NM_001359	chr8,chr8	-,+	NBN,DECR1	-33870,-17250
chr8:110374703-110374945	chr8	+	110374757	110374907	True	NM_177531,NM_032869	chr8,chr8	+,-	PKHD1L1,NUDCD1	-102,-28407
chr10:13027966-13028494	chr10	+	13028093	13028459	True	NM_031455,NM_001008211	chr10,chr10	-,+	CCDC3,OPTN	15303,113622
chr8:127570381-127570623	chr8	+	127570571	127570671	True	NM_001159542,NM_174911	chr8,chr8	+,-	POU5F1B,FAM84B	857185,90
chr6:43445312-43445533	chr6	+	43445322	43445516	True	NM_001146020,NM_206539,NM_080604,NR_027394,NM_001146019,NM_001146018,NM_001146016	chr6,chr6,chr6,chr6,chr6,chr6,chr6	+,-,+,+,+,+,+	TJAP1,DLK2,TJAP1,TJAP1,TJAP1,TJAP1,TJAP1	-112,-21536,-112,-112,-112,-112,-112
chr17:19140361-19140684	chr17	+	19140416	19140478	True	NM_014964,NM_148921,NM_001102664,NR_031591	chr17,chr17,chr17,chr17	+,+,+,-	EPN2,EPN2,EPN2,MIR1180	211,211,211,107459
chr17:19140361-19140684	chr17	+	19014253	19014315	False	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	16466,-63917
chr11:133942727-133944522	chr11	+	133942901	133944450	True	NM_014987,NM_032801	chr11,chr11	-,+	IGSF9B,JAM3	-116021,-4140
chr4:113438072-113438389	chr4	+	113438154	113438360	True	NM_016648,NM_024019	chr4,chr4	+,-	LARP7,NEUROG2	119759,-826
chr12:113590543-113590756	chr12	+	113590633	113590701	True	NM_004658,NM_001144872	chr12,chr12	-,+	RASAL1,CCDC42B	-16589,-3021
chr19:9094486-9094765	chr19	+	9094498	9094600	True	NM_001004456,NM_024690	chr19,chr19	+,-	OR1M1,MUC16	109320,-2480
chr11:61249525-61249824	chr11	+	61249537	61249873	True	NM_001136040,NM_145017,NM_001170753	chr11,chr11,chr11	-,+,+	CPSF7,C11orf66,C11orf66	-52073,-1003,-1003
chr9:75136581-75137176	chr9	+	75136687	75136945	True	NM_138691,NM_006007	chr9,chr9	+,-	TMC1,ZFAND5	-21,-156524
chrX:129272362-129273161	chrX	+	129272458	129273106	True	NM_001130846,NM_004794	chrX,chrX	-,+	AIFM1,RAB33A	-443,32666
chr17:78191894-78192679	chr17	+	78192011	78192647	True	NM_000199,NM_173626,NM_001166349,NM_001166348,NM_001166347	chr17,chr17,chr17,chr17,chr17	-,+,+,+,+	SGSH,SLC26A11,SLC26A11,SLC26A11,SLC26A11	1610,1552,1552,1552,1552
chr1:34654318-34655203	chr1	+	34654433	34655183	True	NM_001134734,NM_052896	chr1,chr1	+,-	C1orf94,CSMD2	-11931,-22990
chr8:1455791-1456424	chr8	+	1455827	1456409	True	NM_004745,NR_033895	chr8,chr8	+,-	DLGAP2,LOC286083	-6309,-205000
chr2:192703423-192705163	chr2	+	192703743	192705202	True	NM_004657,NM_001031716	chr2,chr2	-,+	SDPR,OBFC2A	6854,-160941
chr12:133530542-133531235	chr12	+	133530552	133531117	True	NM_183238,NM_019591,NM_001164715	chr12,chr12,chr12	-,+,-	ZNF605,ZNF26,ZNF605	1801,31938,1825
chr9:33403234-33403453	chr9	+	33403270	33403478	True	NM_001170,NM_002504	chr9,chr9	-,+	AQP7,NFX1	-753,-112903
chr9:134408656-134409118	chr9	+	134409067	134409129	True	NM_001135954,NM_007171,NM_031432	chr9,chr9,chr9	-,+,-	UCK1,POMT1,UCK1	-2405,-30829,-2405
chr1:31199113-31199428	chr1	+	31199218	31199430	True	NR_034182,NM_002379	chr1,chr1	+,-	LOC100129196,MATN1	-7650,-2786
chr19:45907489-45907740	chr19	+	45907493	45907681	True	NM_012099,NM_006663,NM_001142502	chr19,chr19,chr19	+,-,-	CD3EAP,PPP1R13L,PPP1R13L	1785,681,1976
chr1:160046708-160048570	chr1	+	160046923	160048523	True	NM_002241,NM_004983	chr1,chr1	-,+	KCNJ10,KCNJ9	-6872,2836
chrX:152951688-152951959	chrX	+	152951726	152951978	True	NM_001039582,NM_001142806,NM_005629,NM_001142805	chrX,chrX,chrX,chrX	-,+,+,+	PNCK,SLC6A8,SLC6A8,SLC6A8	-11910,2987,1773,1773
chr19:43773364-43773695	chr19	+	43773587	43773677	True	NR_026881,NM_002784	chr19,chr19	+,-	PRG1,PSG9	79530,55
chr4:113495907-113496547	chr4	+	113496259	113496412	True	NM_016648,NM_024019	chr4,chr4	+,-	LARP7,NEUROG2	61707,-58931
chrX:48385013-48386287	chrX	+	48385134	48386343	True	NM_006579,NM_033518	chrX,chrX	+,-	EBP,SLC38A5	-5021,-56490
chr9:27117273-27118522	chr9	+	27117383	27118139	True	NM_000459,NM_022901	chr9,chr9	+,-	TEK,LRRC19	-8287,-111692
chr9:126772007-126773245	chr9	+	126772185	126773171	True	NM_004789,NM_024820	chr9,chr9	+,-	LHX2,DENND1A	717,-79768
chr17:6755838-6756539	chr17	+	6755867	6756320	True	NM_053285,NR_002710	chr17,chr17	-,+	TEKT1,ALOX12P2	-20807,574
chr1:39796564-39797095	chr1	+	39796753	39797141	True	NM_033044,NR_003929	chr1,chr1	+,-	MACF1,PPIEL	-2,228279
chr6:38694792-38696729	chr6	+	38695088	38696687	True	NM_006708,NM_001371	chr6,chr6	-,+	GLO1,DNAH8	-24136,-4587
chr6:27357064-27357310	chr6	+	27357063	27357276	True	NM_001076781,NR_024553	chr6,chr6	+,-	ZNF391,ZNF204P	-590,-13910
chr1:203441278-203443144	chr1	+	203441377	203443167	True	NM_002023,NM_201348,NM_002725	chr1,chr1,chr1	-,+,+	FMOD,PRELP,PRELP	-121088,1715,1715
chr3:88366805-88368181	chr7	-	150915933	150916173	True	NM_007189,NM_019015,NM_005692	chr7,chr7,chr7	-,+,-	ABCF2,CHPF2,ABCF2	8384,13411,8384
chr8:71487763-71488228	chr8	+	71487816	71487884	True	NM_001011720,NM_014294	chr8,chr8	+,-	XKR9,TRAM1	93715,32860
chr16:77757754-77758204	chr16	+	77757776	77757856	True	NR_024154,NM_001105663,NM_199355	chr16,chr16,chr16	+,+,-	NUDT7,NUDT7,ADAMTS18	-1425,-1425,-288765
chr5:75377485-75377698	chr5	+	75377505	75377671	True	NM_001099271,NM_014979	chr5,chr5	-,+	POC5,SV2C	-364192,1633
chr10:61122620-61122918	chr10	+	61122621	61122967	True	NM_001143773,NM_001143774,NM_198215,NM_001001971,NM_001166698	chr10,chr10,chr10,chr10,chr10	-,+,-,-,-	FAM13C,PHYHIPL,FAM13C,FAM13C,FAM13C	40,-185445,-269,-269,-269
chr18:53657294-53658548	chr18	+	53657381	53658337	True	NM_003199,NM_015285	chr18,chr18	-,+	TCF4,WDR7	-401521,660278
chr22:31519284-31519509	chr22	+	31519427	31519501	True	NM_080430,NM_001002837	chr22,chr22	-,+	SELM,INPP5J	-15876,-517
chr19:6721767-6722221	chr19	+	6721903	6722090	True	NM_004240,NM_000064	chr19,chr19	+,-	TRIP10,C3	17616,-1241
chr2:165657871-165659795	chr2	+	165658185	165659633	True	NM_001040142,NM_014900	chr2,chr2	+,-	SCN2A,COBLL1	436278,38353
chr3:101692680-101694042	chr3	+	101692876	101693270	True	NR_026934,NM_000986	chr3,chr3	+,-	LOC152225,RPL24	-33229,-287313
chr6:38693388-38694792	chr6	+	38693614	38694549	True	NM_006708,NM_001371	chr6,chr6	-,+	GLO1,DNAH8	-22662,-3113
chr14:24523083-24523338	chr14	+	24523086	24523368	True	NM_138360,NM_006177	chr14,chr14	+,-	LRRC16B,NRL	-1931,30514
chr5:145562476-145562727	chr5	+	145562480	145562638	True	NM_020117,NM_018989	chr5,chr5	-,+	LARS,RBM27	-186,20524
chr12:53893902-53894472	chr12	+	53894058	53894297	True	NM_003717,NM_004178,NM_134323,NM_001193511,NM_134324,NM_006301	chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,-,+,-	NPFF,TARBP2,TARBP2,MAP3K12,TARBP2,MAP3K12	7176,407,407,-614,1079,-614
chr22:37976130-37976498	chr22	+	37976223	37976311	True	NM_152243,NM_006498	chr22,chr22	+,-	CDC42EP1,LGALS2	-19803,-199
chr8:144717752-144718021	chr8	+	144717957	144718067	True	NM_001082480,NM_003313	chr8,chr8	+,-	ZNF623,TSTA3	305,-18225
chr12:19565049-19565505	chr12	+	19565052	19565198	True	NM_033123,NM_001114176	chr12,chr12	-,+	PLCZ1,AEBP2	-674134,27409
chrX:134866012-134866560	chrX	+	134866039	134866119	True	NM_152582,NM_001017436	chrX,chrX	+,+	CT45A2,CT45A4	94,94
chrX:134866012-134866560	chrX	-	134936829	134936909	False	NM_018666,NM_001017436	chrX,chrX	+,-	SAGE1,CT45A4	38875,-94
chrX:117479639-117479908	chrX	+	117479639	117479953	True	NM_019045,NM_001168301,NM_001184966,NM_001184965	chrX,chrX,chrX,chrX	+,-,+,+	WDR44,KLHL13,WDR44,WDR44	82,-228336,82,82
chr11:76171956-76172695	chr11	+	76172073	76172700	True	NM_020193,NM_004705	chr11,chr11	+,-	C11orf30,PRKRIR	-16055,-80193
chr19:11788437-11789909	chr19	+	11788913	11789589	True	NR_028594,NM_001080493	chr19,chr19	+,-	ZNF833P,ZNF823	-4157,60222
chr1:62901998-62902253	chr1	+	62902012	62902228	True	NM_001017415,NM_001017416,NM_181712,NM_003368	chr1,chr1,chr1,chr1	+,+,-,+	USP1,USP1,KANK4,USP1	-88,-88,-116929,154
chr14:60622616-60624500	chr14	+	60622677	60624402	True	NM_022495,NM_016029	chr14,chr14	+,-	C14orf135,DHRS7	-64099,7859
chr3:34912571-34914147	chr3	+	34912955	34913869	True	NM_015097,NM_016300	chr3,chr3	-,+	CLASP2,ARPP21	-1153107,769979
chr13:19526009-19526408	chr13	+	19526183	19526419	True	NR_027995,NR_026852	chr13,chr13	-,+	LOC284232,LOC348021	-80074,55979
chr7:10980748-10982613	chr7	+	10980826	10982104	True	NM_002489,NM_014660	chr7,chr7	-,+	NDUFA4,PHF14	-1013,31394
chr1:15946303-15948174	chr1	+	15946486	15947798	True	NM_032341,NM_024758	chr1,chr1	+,-	DDI2,AGMAT	-2584,-34881
chr16:27324895-27325101	chr16	+	27324927	27325065	True	NM_000418,NM_001008699,NM_145080	chr16,chr16,chr16	+,+,-	IL4R,IL4R,NSMCE1	185,185,-44814
chr4:153279130-153280837	chr4	+	153279132	153280399	True	NR_033797,NM_018315	chr4,chr4	+,-	DKFZP434I0714,FBXW7	177016,-5022
chr6:17282318-17283049	chr6	+	17282321	17282914	True	NM_001143941,NM_153020,NM_005124,NM_001143942	chr6,chr6,chr6,chr6	+,+,-,+	RBM24,RBM24,NUP153,RBM24	-78,17,423954,-564
chr17:55332628-55333143	chr17	+	55332629	55333125	True	NM_004645,NM_138962,NM_170721	chr17,chr17,chr17	-,+,+	COIL,MSI2,MSI2	-294218,805,1248
chr2:73145602-73145864	chr2	+	73145643	73145909	True	NM_015189,NM_004097	chr2,chr2	-,+	EXOC6B,EMX1	-92466,-1090
chr5:159615804-159616407	chr5	+	159615888	159616241	True	NM_001130958,NM_001040442,NM_001130864	chr5,chr5,chr5	+,+,-	FABP6,FABP6,PWWP2A	-1565,9806,-69436
chr15:83652500-83652930	chr15	+	83652640	83652782	True	NM_031452,NM_001160116	chr15,chr15	+,-	FAM103A1,C15orf40	2212,27673
chr16:15149989-15150194	chr16	+	15149996	15150064	True	NM_015027,NM_173474	chr16,chr16	+,-	PDXDC1,NTAN1	-81214,-163
chr17:34954121-34954466	chr17	+	34954135	34954357	True	NM_024864,NM_001033580,NM_024308	chr17,chr17,chr17	+,-,+	MRM1,MYO19,DHRS11	3667,-62830,-5960
chr1:227752750-227753616	chr1	+	227753247	227753460	True	NR_036753,NR_033184,NM_178549	chr1,chr1,chr1	-,+,+	ZNF847P,ZNF678,ZNF678	132001,-2081,-2081
chr6:117911657-117912308	chr6	+	117911766	117911975	True	NM_138459,NM_001017408	chr6,chr6	+,-	NUS1,GOPC	84641,11789
chr5:166739395-166739844	chr5	+	166739399	166739835	True	NM_001122679,NR_029520	chr5,chr5	+,-	ODZ2,MIR103-1	-27614,1248193
chr19:44717873-44718805	chr19	+	44717875	44718495	True	NM_004234,NM_182490	chr19,chr19	-,+	ZNF235,ZNF227	90740,-1235
chr16:33262249-33262472	chr16	+	33262348	33262488	True	NM_001205260,NM_001205265,NM_001205259,NM_001099687,NM_016212,NR_033866	chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,-	LOC653550,TP53TG3B,LOC653550,TP53TG3B,TP53TG3,LOC390705	-279,-279,-279,-279,-884,36264
chr16:33262249-33262472	chr16	+	33205813	33205953	False	NM_001205260,NM_001205265,NM_001205259,NM_001099687,NM_016212,NR_033866	chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,-	LOC653550,TP53TG3B,LOC653550,TP53TG3B,TP53TG3,LOC390705	-279,-279,-279,-279,-884,92799
chr16:33262249-33262472	chr16	+	32264873	32264995	False	NR_033866,NM_003414	chr16,chr16	-,+	LOC390705,ZNF267	36361,-379845
chr16:33262249-33262472	chr16	-	32687079	32687219	False	NM_001205260,NM_016212,NM_001099687,NM_001205259,NM_001205265	chr16,chr16,chr16,chr16,chr16	-,-,-,-,-	LOC653550,TP53TG3,TP53TG3B,LOC653550,TP53TG3B	279,884,279,279,279
chr13:20044193-20045140	chr13	+	20044203	20045029	True	NR_034026,NM_001141968	chr13,chr13	+,-	LOC100287114,TPTE2	-125072,65931
chr2:128431440-128431752	chr2	+	128431540	128431716	True	NM_001161404,NM_017980,NM_001136037,NM_001161403,NM_032740	chr2,chr2,chr2,chr2,chr2	-,-,-,-,+	LIMS2,LIMS2,LIMS2,LIMS2,SFT2D3	7694,-9373,1098,1098,26880
chr8:65676158-65678110	chr8	+	65676219	65677852	True	NM_152414,NM_004820	chr8,chr8	+,-	BHLHE22,CYP7B1	-183475,33546
chr16:58501554-58502479	chr16	+	58501575	58502361	True	NM_001130487,NR_002978,NM_020465,NM_022910	chr16,chr16,chr16,chr16	+,-,+,+	NDRG4,SNORA46,NDRG4,NDRG4	-3632,80226,-4077,-2861
chr14:72453675-72455335	chr14	+	72453943	72455092	True	NM_004296,NM_012074	chr14,chr14	+,-	RGS6,DPF3	-54215,905768
chr2:15688620-15690254	chr2	+	15688801	15689989	True	NM_004939,NM_015909	chr2,chr2	+,-	DDX1,NBAS	41780,11528
chr7:44121637-44121905	chr7	+	44121671	44121807	True	NM_013284,NM_001129	chr7,chr7	-,+	POLM,AEBP1	372,22152
chr12:57403489-57404058	chr12	+	57403575	57404085	True	NM_013251,NM_007264,NM_014830,NM_001178054,NR_033654	chr12,chr12,chr12,chr12,chr12	-,+,-,-,-	TAC3,GPR182,ZBTB39,TAC3,TAC3	6309,-15285,-3278,6309,6309
chr8:41523991-41524242	chr8	+	41523996	41524217	True	NM_020478,NR_030161,NM_178819,NM_020480,NM_001142445	chr8,chr8,chr8,chr8,chr8	-,-,+,-,-	ANK1,MIR486,AGPAT6,ANK1,ANK1	-1192,-5970,-88340,-1192,-1192
chr2:133426810-133427096	chr2	+	133426867	133427047	True	NM_001077427,NM_001508,NM_144586	chr2,chr2,chr2	-,+,-	LYPD1,GPR39,LYPD1	2073,-252771,1484
chr5:115912345-115912834	chr5	+	115912411	115912812	True	NM_020796,NM_016144	chr5,chr5	-,+	SEMA6A,COMMD10	-1860,-491742
chr10:65212889-65213641	chr10	+	65213149	65213464	True	NR_027182,NM_032776	chr10,chr10	+,-	LOC84989,JMJD1C	11524,12315
chr1:206778009-206778715	chr1	+	206778137	206778678	True	NM_006893,NM_001201478,NM_001004023	chr1,chr1,chr1	-,-,+	EIF2D,EIF2D,DYRK3	7283,7283,30202
chr6:35705976-35707007	chr6	+	35706163	35706736	True	NR_027117,NM_001145775,NM_145028	chr6,chr6,chr6	-,-,+	LOC285847,FKBP5,C6orf81	-1439,-9803,-1355
chr11:70994430-70994795	chr11	+	70994435	70994639	True	NM_018161,NM_012309	chr11,chr11	+,-	NADSYN1,SHANK2	169577,-58627
chr12:133563533-133564136	chr12	+	133563543	133564183	True	NM_019591,NM_001164715	chr12,chr12	+,-	ZNF26,ZNF605	-538,-30651
chrX:64888571-64890311	chrX	+	64888775	64890266	True	NM_002444,NR_033742	chrX,chrX	+,-	MSN,FKSG43	-1315,-116474
chr4:178700605-178701767	chr4	+	178700654	178701677	True	NR_033655,NR_028342	chr4,chr4	-,+	AGA,LOC285501	-336997,-50794
chr11:561917-562260	chr11	+	561988	562224	True	NR_029623,NM_173573,NM_001143994,NM_001143993,NM_003475	chr11,chr11,chr11,chr11,chr11	-,-,+,+,+	MIR210,C11orf35,RASSF7,RASSF7,RASSF7	6024,-1209,-589,-1068,-589
chr2:25192641-25193425	chr2	+	25192821	25193315	True	NM_016544,NM_001198559,NR_034113	chr2,chr2,chr2	-,-,+	DNAJC27,DNAJC27,LOC729723	1698,1698,1665
chr7:140372141-140372706	chr7	+	140372151	140372585	True	NR_024454,NM_052853	chr7,chr7	-,+	LOC100134713,ADCK2	24342,367
chr11:1633262-1633951	chr11	+	1633386	1633840	True	NM_001012709,NM_001012708,NM_001001480	chr11,chr11,chr11	-,-,+	KRTAP5-4,KRTAP5-3,KRTAP5-5	9578,-3693,17192
chr2:220363214-220363558	chr2	+	220363323	220363603	True	NM_013335,NM_205847,NM_001195731	chr2,chr2,chr2	+,+,-	GMPPA,GMPPA,CHPF	-1,13,44266
chr6:36367629-36369316	chr6	+	36367678	36369142	True	NM_016135,NM_173562	chr6,chr6	-,+	ETV7,KCTD20	-12211,41401
chr8:143279496-143279759	chr8	+	143279531	143279675	True	NM_145003,NR_024378	chr8,chr8	-,+	TSNARE1,NCRNA00051	204918,41
chr7:66206369-66206610	chr7	+	66206406	66206655	True	NR_003934,NM_014504	chr7,chr7	-,+	LOC729156,RABGEF1	103208,-814
chrX:151086039-151086357	chrX	+	151086081	151086373	True	NR_029973,NM_002362,NM_001011548,NM_001011549,NM_001011550	chrX,chrX,chrX,chrX,chrX	-,+,+,+,+	MIR452,MAGEA4,MAGEA4,MAGEA4,MAGEA4	41861,-1423,-4771,-735,386
chrX:151086039-151086357	chrX	+	151084037	151084329	False	NR_029973,NM_002362,NM_001011548,NM_001011549,NM_001011550	chrX,chrX,chrX,chrX,chrX	-,+,+,+,+	MIR452,MAGEA4,MAGEA4,MAGEA4,MAGEA4	43905,379,-2727,1067,2430
chrX:151086039-151086357	chrX	+	151086756	151087048	False	NR_029973,NM_002362,NM_001011548,NM_001011549,NM_001011550	chrX,chrX,chrX,chrX,chrX	-,+,+,+,+	MIR452,MAGEA4,MAGEA4,MAGEA4,MAGEA4	41186,-2098,-5446,-1410,-47
chr19:6373990-6374263	chr19	+	6374007	6374241	True	NM_004158,NM_032306	chr19,chr19	-,+	PSPN,ALKBH7	1669,-1614
chr20:277235-277930	chr20	+	277355	277929	True	NM_033089,NM_153269	chr20,chr20	+,-	ZCCHC3,C20orf96	274,-5965
chr2:47135923-47136144	chr2	+	47136000	47136190	True	NM_139279,NM_001171509,NM_020458,NM_001171507,NM_001171510,NM_001171506	chr2,chr2,chr2,chr2,chr2,chr2	-,-,+,-,-,-	MCFD2,MCFD2,TTC7A,MCFD2,MCFD2,MCFD2	6867,6867,32122,7111,7111,6867
chr8:6265882-6266497	chr8	+	6266018	6266164	True	NM_001172575,NM_001172574,NM_001118887,NM_024596	chr8,chr8,chr8,chr8	+,+,-,+	MCPH1,MCPH1,ANGPT2,MCPH1	-1962,-1962,154670,-1962
chr15:48625021-48625799	chr15	+	48625034	48625815	True	NM_001948,NM_001025248,NM_001025249,NM_016132	chr15,chr15,chr15,chr15	+,+,+,-	DUT,DUT,DUT,MYEF2	-720,-1464,-1464,-154476
chr10:101540590-101541360	chr10	+	101540592	101541399	True	NM_000392,NM_078470	chr10,chr10	+,-	ABCC2,COX15	1063,-48169
chr3:52188071-52188561	chr3	+	52188079	52188555	True	NM_015426,NM_199166,NM_001161580,NM_001161581	chr3,chr3,chr3,chr3	-,+,-,-	POC1A,ALAS1,POC1A,POC1A	201,43560,201,201
chr5:10616530-10617090	chr5	+	10616691	10616943	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-52307,144494
chr12:66615731-66616911	chr12	+	66615878	66616641	True	NM_016056,NM_007199	chr12,chr12	-,+	TMBIM4,IRAK3	-52071,-32967
chr2:91846163-91846532	chr11	-	1897115	1897165	True	NR_036185,NM_001013254,NM_001013255,NM_001013253	chr11,chr11,chr11,chr11	-,+,+,+	MIR4298,LSP1,LSP1,LSP1	-16349,-5067,-5012,-7263
chr2:91846163-91846532	chr2	+	91846236	91846493	False	NR_003503,NR_027238	chr2,chr2	+,-	GGT8P,LOC654342	116874,1532
chr14:20938644-20939280	chr14	+	20938669	20939181	True	NM_144568,NM_000270,NM_001100814	chr14,chr14,chr14	-,+,-	TMEM55B,PNP,TMEM55B	-9032,-1183,-9032
chrX:114803330-114804411	chrX	+	114803502	114804249	True	NM_005032,NM_020871	chrX,chrX	+,-	PLS3,LRCH2	-8376,-334867
chr2:49345601-49346267	chr2	+	49345763	49346265	True	NM_000145,NM_006872	chr2,chr2	-,+	FSHR,GTF2A1L	35451,-500884
chr8:68254784-68255315	chr8	+	68254783	68255111	True	NM_024790,NM_006421	chr8,chr8	+,-	CSPP1,ARFGEF1	-278231,851
chr12:105377438-105377856	chr12	+	105377598	105377870	True	NM_152318,NM_032148	chr12,chr12	+,-	C12orf45,SLC41A2	2227,-55126
chr16:30621927-30622490	chr16	+	30621969	30622094	True	NM_138447,NM_024031	chr16,chr16	-,+	ZNF689,PRR14	-287,40146
chr18:74963280-74963530	chr18	+	74963329	74963543	True	NM_001480,NM_001025100	chr18,chr18	+,-	GALR1,MBP	-1372,-118555
chr7:72990055-72990472	chr7	+	72990394	72990478	True	NM_001077621,NM_012453	chr7,chr7	+,-	VPS37D,TBL2	91695,2585
chr8:104031636-104033215	chr8	+	104031840	104033110	True	NM_001695,NR_027071	chr8,chr8	+,-	ATP6V1C1,C8orf56	137,120510
chr7:28339595-28341178	chr7	+	28339820	28341149	True	NM_182899,NM_175061	chr7,chr7	+,-	CREB5,JAZF1	-934,-119383
chr11:110167790-110169561	chr11	+	110167849	110169283	True	NM_002906,NM_004109	chr11,chr11	-,+	RDX,FDX1	-412,131310
chr8:93048850-93049829	chr8	+	93048987	93049564	True	NM_175636,NM_052832	chr8,chr8	-,+	RUNX1T1,SLC26A7	-19079,-787533
chr16:27897301-27897615	chr16	+	27897301	27897447	True	NM_015202,NM_144675	chr16,chr16	+,-	KIAA0556,GSG1L	-335884,2081
chr19:33863712-33864277	chr19	+	33863805	33864311	True	NM_001806,NM_004364	chr19,chr19	+,-	CEBPG,CEBPA	297,-70375
chr12:53183670-53183882	chr12	+	53183788	53183874	True	NM_199187,NM_057088	chr12,chr12	+,-	KRT18,KRT3	158780,6068
chr20:2361151-2362027	chr20	+	2361223	2361993	True	NR_003684,NM_198994	chr20,chr20	-,+	SNORD119,TGM6	81750,106
chr5:180689373-180690749	chr5	+	180689573	180690663	True	NM_201627	chr5	+	TRIM41	-39318
chr5:143584799-143585005	chr5	+	143584858	143584974	True	NM_020768,NM_030799	chr5,chr5	+,-	KCTD16,YIPF5	-34473,-34580
chr19:49117172-49117696	chr19	+	49117204	49117710	True	NM_001204159,NM_001204158,NM_000979,NM_017708,NM_133498,NM_020126	chr19,chr19,chr19,chr19,chr19,chr19	+,+,-,-,+,+	SPHK2,SPHK2,RPL18,FAM83E,SPACA4,SPHK2	5080,4837,4773,-510,-7255,4837
chr11:43924719-43924997	chr11	+	43924730	43925020	True	NR_026952,NM_021926	chr11,chr11	+,-	LOC729799,ALX4	-5935,406746
chr14:81407979-81408247	chr14	+	81408004	81408270	True	NM_152446,NM_001018036	chr14,chr14	-,+	C14orf145,TSHR	-2120,13598
chr7:37488940-37489348	chr7	+	37488953	37489382	True	NM_181791,NM_014800	chr7,chr7	+,-	GPR141,ELMO1	290613,-442
chr17:73523509-73524355	chr17	+	73523563	73524192	True	NM_001031803,NM_020753,NM_001015002,NM_004524	chr17,chr17,chr17,chr17	+,-,+,+	LLGL2,CASKIN2,LLGL2,LLGL2	-1839,-11936,-1839,-1839
chr2:209289734-209291650	chr2	+	209289946	209291666	True	NM_005896,NM_005048	chr2,chr2	-,+	IDH1,PTH2R	-170140,-18448
chr15:72102888-72103312	chr15	+	72102993	72103303	True	NM_014249,NM_016346,NM_006901	chr15,chr15,chr15	+,+,-	NR2E3,NR2E3,MYO9A	-150,-150,307169
chr12:56115155-56115536	chr12	+	56115255	56115571	True	NM_001780,NM_001144997,NR_037656,NR_037658,NM_001040034,NR_037655,NR_037657,NM_001487,NM_002905,NM_001199771	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,-,+,+,-,+,+,+,+,+	CD63,ITGA7,BLOC1S1,BLOC1S1-RDH5,CD63,BLOC1S1,BLOC1S1,BLOC1S1,RDH5,RDH5	7389,-9166,-5230,-5488,7389,-5488,-5230,-5488,-1155,-1155
chr16:28988140-28989357	chr16	+	28988261	28989274	True	NM_001014987,NM_024816,NM_001014989,NM_001014988,NM_001142448,NM_001142449,NM_001142451,NM_001142450,NM_032038,NM_014387	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,-,+,+,+,+,+,+,+,+	LAT,RABEP2,LAT,LAT,SPNS1,SPNS1,SPNS1,SPNS1,SPNS1,LAT	7112,-51729,6872,7112,-2217,-2217,-2217,-2217,-2217,7112
chr12:54014282-54015286	chr12	+	54014705	54015120	True	NM_006856,NM_001130060,NM_134324	chr12,chr12,chr12	-,-,+	ATF7,ATF7,TARBP2	5140,5140,-119386
chr14:55371258-55373229	chr14	+	55371420	55373123	True	NM_001024070,NM_001024071,NM_001024024,NM_000161,NM_080867	chr14,chr14,chr14,chr14,chr14	-,-,-,-,+	GCH1,GCH1,GCH1,GCH1,SOCS4	-1878,-1878,-1878,-1878,120720
chr2:16080412-16080620	chr2	+	16080436	16080520	True	NR_026766,NM_005378	chr2,chr2	-,+	MYCNOS,MYCN	1375,162
chr3:127879050-127880722	chr3	+	127879145	127880655	True	NM_021937,NM_003707	chr3,chr3	+,-	EEFSEC,RUVBL1	-6883,-36474
chr16:1465114-1465350	chr16	+	1465134	1465350	True	NM_032520,NM_001193388,NM_001037125	chr16,chr16,chr16	+,-,-	GNPTG,UNKL,UNKL	-63288,-429,-429
chr22:41941885-41942747	chr22	+	41941965	41942205	True	NM_001018050,NM_001018052,NM_014460,NM_138338	chr22,chr22,chr22,chr22	-,-,+,-	POLR3H,POLR3H,CSDC2,POLR3H	-1486,-1486,14808,-1489
chr1:182423172-182424571	chr1	+	182423399	182424406	True	NM_172000,NM_001137669	chr1,chr1	-,+	TEDDM1,RGSL1	-53648,-4194
chr17:25382926-25384286	chr17	+	25383847	25384169	True	NM_015626,NM_000625	chr17,chr17	+,-	WSB1,NOS2	236936,743442
chr2:175870279-175870488	chr2	+	175870311	175870535	True	NM_001025201,NM_024583,NM_001822	chr2,chr2,chr2	-,+,-	CHN1,SCRN3,CHN1	-141,-609906,-141
chr18:19749223-19749484	chr18	+	19749230	19749525	True	NM_005257,NM_172241	chr18,chr18	+,-	GATA6,CTAGE1	4,248403
chr4:48485773-48486110	chr4	+	48485851	48486159	True	NM_175619,NM_152679,NM_003215	chr4,chr4,chr4	+,+,-	ZAR1,SLC10A4,TEC	6149,-542,-214037
chr17:3868257-3869117	chr17	+	3868263	3869132	True	NM_174958,NM_144611,NM_174953,NM_174955,NM_174954,NM_174957,NM_174956,NM_005173	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,-,-,-,-,-,-	ATP2A3,CYB5D2,ATP2A3,ATP2A3,ATP2A3,ATP2A3,ATP2A3,ATP2A3	-527,177329,-527,-527,-527,-527,-527,-527
chr5:160224243-160225537	chr5	+	160224266	160225540	True	NR_029701,NM_025153	chr5,chr5	+,-	MIR146A,ATP10B	-311958,53729
chr2:24161083-24162223	chr2	+	24161522	24162264	True	NM_181713,NM_017552	chr2,chr2	+,-	UBXN2A,ATAD2B	1111,-11588
chr1:62190755-62191762	chr1	+	62190871	62191707	True	NM_176877,NM_032027	chr1,chr1	+,-	INADL,TM2D1	16441,42
chr2:47358159-47358944	chr2	+	47358544	47358959	True	NM_020458,NM_001163561	chr2,chr2	+,-	TTC7A,C2orf61	-190297,23609
chr15:99788556-99788833	chr15	+	99788594	99788860	True	NM_001040658,NM_001040659,NM_001040656,NM_001040657,NM_001040660,NM_144598,NM_022905,NM_001040655	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,-,-,-,+,-,-	TTC23,TTC23,TTC23,TTC23,TTC23,LRRC28,TTC23,TTC23	1005,1005,1005,1005,1005,2791,1005,1005
chr10:33242660-33244209	chr10	+	33242680	33244249	True	NM_002211,NM_133376,NM_024688	chr10,chr10,chr10	-,-,+	ITGB1,ITGB1,C10orf68	3094,2623,-386080
chr20:31641973-31642311	chr20	+	31641997	31642341	True	NM_182658,NM_080675	chr20,chr20	+,-	C20orf185,SUN5	888,-49758
chr19:18794880-18795194	chr19	+	18794896	18795242	True	NM_004750,NM_001098482,NM_015321	chr19,chr19,chr19	-,+,+	CRLF1,CRTC1,CRTC1	-77236,-522,-522
chr6:150365576-150365986	chr6	+	150365902	150365984	True	NM_025218,NM_130900	chr6,chr6	+,-	ULBP1,RAET1L	-80810,-19234
chr10:43914074-43915301	chr10	+	43914179	43915207	True	NR_026693,NM_001098204,NM_001098205,NM_004966	chr10,chr10,chr10,chr10	+,-,-,-	ZNF487P,HNRNPF,HNRNPF,HNRNPF	17366,-9483,-9847,-9523
chr19:15903569-15905286	chr19	+	15903592	15905091	True	NM_013940,NM_001004466,NR_033864	chr19,chr19,chr19	-,+,-	OR10H1,OR10H5,CYP4F24P	13895,91,-12794
chr21:43638072-43638735	chr21	+	43638088	43638544	True	NM_004915,NM_207174,NM_003226,NM_016818,NM_207629	chr21,chr21,chr21,chr21,chr21	+,+,-,+,+	ABCG1,ABCG1,TFF3,ABCG1,ABCG1	722,1463,97212,722,-1952
chr8:17393793-17395350	chr8	+	17394107	17395285	True	NM_001164771,NM_003046,NM_004686	chr8,chr8,chr8	+,+,-	SLC7A2,SLC7A2,MTMR7	1000,1000,-123067
chr12:111475873-111476838	chr12	+	111475879	111476887	True	NM_000432,NM_015267	chr12,chr12	-,+	MYL2,CUX2	-117475,-4102
chr12:72228167-72229634	chr12	+	72228611	72229501	True	NR_027449,NM_022771,NM_001146214,NM_001146213,NR_024072	chr12,chr12,chr12,chr12,chr12	+,+,+,+,-	TBC1D15,TBC1D15,TBC1D15,TBC1D15,MRS2P2	3985,3985,3985,3985,15315
chr10:12234572-12235966	chr10	+	12234979	12235614	True	NM_014142,NM_006023	chr10,chr10	-,+	NUDT5,CDC123	2586,2346
chr1:47077963-47078258	chr1	+	47078005	47078093	True	NM_201403,NM_198973,NM_001145474,NM_003684,NR_024174,NM_001135553,NR_024176,NM_145279	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,+,-,-,-,-,-	MOBKL2C,MKNK1,C1orf223,MKNK1,MKNK1,MKNK1,MKNK1,MOBKL2C	4520,-8039,59406,-8039,-8039,-8039,-8039,2762
chrX:17393538-17393757	chrX	+	17393547	17393709	True	NR_033348,NM_198270	chrX,chrX	-,+	RAI2,NHS	485288,-55
chr2:43056747-43057173	chr2	+	43056774	43057174	True	NM_020744,NM_012205	chr2,chr2	+,-	MTA3,HAAO	-261154,-37023
chr14:72019267-72019695	chr14	+	72019433	72019696	True	NM_015556,NM_033141	chr14,chr14	+,-	SIPA1L1,MAP3K9	-23455,-743545
chr12:53661621-53661949	chr12	+	53661728	53661896	True	NM_012291,NM_000966	chr12,chr12	+,-	ESPL1,RARG	186,-35692
chr17:80795983-80796759	chr17	+	80796081	80796757	True	NM_024702,NM_005993	chr17,chr17	-,+	ZNF750,TBCD	1224,-86199
chr1:150953214-150953711	chr1	+	150953444	150953738	True	NM_003568,NM_022075,NM_181746	chr1,chr1,chr1	+,-,-	ANXA9,LASS2,LASS2	760,-6004,-6004
chr12:125814291-125814701	chr12	+	125814317	125814611	True	NM_032656,NM_052907	chr12,chr12	-,+	DHX37,TMEM132B	-340650,-3207
chr14:37128201-37128608	chr14	+	37128352	37128582	True	NM_006194,NM_014360	chr14,chr14	+,-	PAX9,NKX2-8	-1638,-76566
chr12:128082962-128084182	chr12	+	128083066	128083849	True	NR_033970,NR_033987	chr12,chr12	-,+	LOC440117,FLJ37505	-723830,282312
chr1:70686951-70687239	chr1	+	70687002	70687252	True	NM_017768,NM_004768	chr1,chr1	-,+	LRRC40,SRSF11	-15641,-15688
chr6:123316907-123317172	chr6	+	123316906	123317094	True	NM_001010852,NM_020755	chr6,chr6	+,-	CLVS2,SERINC1	487,-523954
chr2:172861362-172862107	chr2	+	172861547	172862005	True	NM_199227,NM_004405	chr2,chr2	+,-	METAP1D,DLX2	2798,105525
chr14:24611833-24612611	chr14	+	24611936	24612540	True	NM_017999,NM_016049,NM_006263,NM_176783,NM_002818	chr14,chr14,chr14,chr14,chr14	+,-,+,+,-	RNF31,FAM158A,PSME1,PSME1,PSME2	4118,-1139,-6613,-6613,3365
chrY:8556403-8557342	chrY	+	8556467	8557359	True	NR_001550,NR_001549	chrY,chrY	-,+	TTTY18,TTTY19	-4548,15153
chr1:202166601-202166945	chr1	+	202166614	202166929	True	NR_037664,NM_021636,NM_001017403	chr1,chr1,chr1	-,+,+	PTPN7,LGR6,LGR6	-35898,5975,-3547
chrX:48622224-48623004	chrX	+	48622303	48622768	True	NM_013271,NM_001080489	chrX,chrX	-,+	PCSK1N,GLOD5	71255,-2207
chr16:11925782-11926517	chr16	+	11925878	11926401	True	NR_024050,NM_001192,NR_024049	chr16,chr16,chr16	-,+,-	BCAR4,TNFRSF17,BCAR4	-3189,132562,-3189
chr4:13545133-13545385	chr4	+	13545144	13545428	True	NR_015450,NM_001189,NR_003132	chr4,chr4,chr4	-,-,+	LOC285548,NKX3-2,HSP90AB2P	4070,736,-210158
chr10:35104455-35104701	chr10	+	35104640	35104706	True	NM_019619,NM_001184789,NM_001184788,NM_001184790,NM_001184791,NM_001184792,NM_001184793,NM_001184787,NM_001184786,NM_001184785,NM_001184794,NM_001881	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,-,-,-,-,-,-,-,+	PARD3,PARD3,PARD3,PARD3,PARD3,PARD3,PARD3,PARD3,PARD3,PARD3,PARD3,CREM	-387,-387,-387,-387,-387,-387,-387,-387,-387,-387,-387,311094
chr1:196504859-196505408	chr1	+	196504881	196505453	True	NM_198503,NM_001014975	chr1,chr1	-,+	KCNT2,CFH	72096,115554
chr17:26986861-26987503	chr17	+	26987280	26987506	True	NM_006923,NM_003170	chr17,chr17	-,+	SDF2,SUPT6H	1477,1795
chr3:151988161-151989687	chr3	+	151988214	151989460	True	NR_027038,NM_021038,NM_207292,NR_027037	chr3,chr3,chr3,chr3	-,+,+,-	LOC401093,MBNL1,MBNL1,LOC401093	-799,-2436,-2436,-799
chr2:29348075-29348760	chr2	+	29348145	29348685	True	NM_001029883,NM_024692	chr2,chr2	-,+	C2orf71,CLIP4	-51018,-9896
chr9:131130385-131131351	chr9	+	131130388	131130872	True	NR_029837,NM_030914,NM_001135947	chr9,chr9,chr9	-,+,+	MIR219-2,URM1,URM1	24171,2725,2725
chr22:16404648-16405000	chr22	+	16404675	16404910	True	NM_001005239,NR_001591	chr22,chr22	-,+	OR11H1,psiTPTE22	44944,677890
chr22:16404648-16405000	chr14	-	19422672	19422722	False	NM_001145442,NM_001013354	chr14,chr14	-,+	POTEM,OR11H12	597600,-45129
chr22:16404648-16405000	chr14	+	20136963	20137191	False	NM_001197287,NM_172194	chr14,chr14	-,+	OR11H2,OR4Q3	45350,78395
chr3:108562098-108563231	chr3	+	108562533	108563166	True	NM_032579,NM_016388	chr3,chr3	-,+	RETNLB,TRAT1	-86403,-20963
chr17:44319101-44319603	chr17_ctg5_hap1	-	547434	547502	False	NM_001193465,NR_034172	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	KIAA1267,LOC644246	15995,47942
chr17:44319101-44319603	chr17_ctg5_hap1	+	1186910	1186978	False	NR_026901,NR_037772	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LOC644172,CRHR1	1460,-16457
chr17:44319101-44319603	chr17_ctg5_hap1	+	1406469	1406537	False	NR_002940,NM_016632	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LRRC37A4,ARL17A	74839,107405
chr17:44319101-44319603	chr17	+	44319324	44319466	True	NM_001193465,NR_034172	chr17,chr17	-,+	KIAA1267,LOC644246	-16584,-48446
chr8:101273082-101273481	chr8	+	101273150	101273257	True	NM_003114,NM_015435	chr8,chr8	+,-	SPAG1,RNF19A	-102642,42293
chr6:152959653-152960398	chr6	+	152959653	152960344	True	NM_025107,NM_182961,NM_033071	chr6,chr6,chr6	+,-,-	MYCT1,SYNE1,SYNE1	58685,-1119,-1667
chr17:7989011-7989343	chr17	+	7989092	7989378	True	NR_036201,NM_001139	chr17,chr17	+,-	MIR4314,ALOX12B	1995,1693
chrX:101772032-101773617	chrX	+	101772249	101773489	True	NR_002216,NM_021992	chrX,chrX	+,-	NXF4,TMSB15A	31403,-550
chr19:14168809-14169260	chr19	+	14168970	14169030	True	NR_024282,NM_001145028	chr19,chr19	+,-	LOC113230,PALM3	14790,991
chr16:85212381-85213839	chr16	+	85212812	85213820	True	NR_033984,NM_198491	chr16,chr16	+,-	LOC400548,FAM92B	-42108,-66698
chr4:8271054-8271256	chr4	+	8271053	8271153	True	NM_053044,NM_001130088	chr4,chr4	+,-	HTRA3,ABLIM2	335,-110494
chr3:19209812-19210841	chr3	+	19210042	19210694	True	NM_001131010,NM_144633	chr3,chr3	-,+	SATB1,KCNH8	-729777,-20076
chr22:51022648-51024218	chr22	+	51023117	51023904	True	NM_001145137,NM_001145136,NM_001145135,NM_001145134,NR_021492,NM_005198,NM_152245,NR_027928,NM_004377,NM_152246	chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,+,-,-,-,-,-	CPT1B,CPT1B,CPT1B,CPT1B,LOC100144603,CHKB,CPT1B,CHKB-CPT1B,CPT1B,CPT1B	-6611,-6021,-6021,-6021,-1714,-1689,-6021,-1689,-6223,-6223
chr2:26568693-26569025	chr2	+	26568737	26569057	True	NM_033505,NM_153835	chr2,chr2	+,-	EPT1,GPR113	-104,678
chr19:16309709-16310272	chr19	+	16309897	16310315	True	NM_001130524,NM_032493,NM_054113	chr19,chr19,chr19	+,+,-	AP1M1,AP1M1,CIB3	-1283,-1283,-25611
chr14:56011668-56013530	chr14	+	56012152	56013557	True	NM_004986,NR_027123	chr14,chr14	+,-	KTN1,C14orf33	33367,33303
chr7:95112157-95113445	chr7	+	95112275	95113256	True	NM_145872,NM_016116,NM_001018161	chr7,chr7,chr7	+,+,-	ASB4,ASB4,PON2	1956,1956,-47891
chr3:159019915-159020642	chr3	+	159019962	159020559	True	NM_002888,NR_037483	chr3,chr3	-,+	RARRES1,MIR3919	-569687,-19578
chr17:34305547-34306086	chr17	+	34305571	34305873	True	NM_004590,NM_032963,NM_032962,NM_002988	chr17,chr17,chr17,chr17	-,-,-,+	CCL16,CCL14,CCL14,CCL18	2700,7941,7941,85769
chr1:173614054-173616054	chr1	+	173614413	173616071	True	NM_001195190,NM_198493	chr1,chr1	+,-	LOC730159,ANKRD45	-9810,22980
chr15:20748319-20750228	chr15	+	20749579	20750145	True	NR_027411,NM_001145004	chr15,chr15	+,-	GOLGA8C,GOLGA6L6	17528,-2465
chr15:20748319-20750228	chr15	+	23416888	23417206	False	NR_002824,NR_033350	chr15,chr15	-,+	HERC2P2,GOLGA8E	-38629,17863
chr15:20748319-20750228	chr15	+	28605949	28606267	False	NM_004667,NR_033351	chr15,chr15	-,+	HERC2,GOLGA8F	-38654,17516
chr15:20748319-20750228	chr15	-	28795671	28795989	False	NR_036443,NR_033351	chr15,chr15	+,-	HERC2P9,GOLGA8F	103598,-17528
chr17:41907225-41908517	chr17	+	41907257	41908305	True	NR_003562,NM_001168324,NM_001932	chr17,chr17,chr17	-,+,-	MPP3,CD300LG,MPP3	2294,16210,2294
chr3:33757771-33759077	chr3	+	33757815	33758810	True	NM_015097,NR_027868	chr3,chr3	-,+	CLASP2,PDCD6IP	1088,81255
chr15:80445914-80446449	chr15	+	80445952	80446444	True	NM_000137,NM_004049	chr15,chr15	+,-	FAH,BCL2A1	-662,-182309
chr2:85811634-85811911	chr2	+	85811861	85811923	True	NM_003761,NM_001031738,NM_006634	chr2,chr2,chr2	+,-,+	VAMP8,TMEM150A,VAMP5	-7298,17949,-381
chr22:41682918-41683912	chr22	+	41682950	41683326	True	NM_017590,NM_002883	chr22,chr22	+,-	ZC3H7B,RANGAP1	14240,-734
chr1:247512961-247514658	chr1	+	247513046	247514298	True	NM_032752,NM_001079821	chr1,chr1	-,+	ZNF496,NLRP3	-18001,65159
chr6:42894608-42895725	chr6	+	42894620	42895343	True	NM_006586,NM_001008739	chr6,chr6	+,-	CNPY3,C6orf226	1516,-36066
chr17:79350243-79350961	chr17	+	79350256	79351006	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	22533,-45782
chr11:65384319-65384532	chr11	+	65384327	65384419	True	NM_032223,NM_002419	chr11,chr11	+,-	PCNXL3,MAP3K11	-596,-2607
chr8:39375102-39375403	chr8	+	39375229	39375435	True	NM_001190956,NR_024106,NR_024107,NR_001569	chr8,chr8,chr8,chr8	+,-,-,-	ADAM18,ADAM3A,ADAM3A,ADAM3A	66651,5085,5085,5085
chr15:42132150-42132525	chr15	+	42132157	42132427	True	NR_036195,NM_001114633	chr15,chr15	-,+	MIR4310,PLA2G4B	26372,-1197
chr19:10615395-10615785	chr19	+	10615501	10615620	True	NM_203500,NM_012289,NM_032885	chr19,chr19,chr19	-,-,+	KEAP1,KEAP1,ATG4D	-1447,-2020,39026
chr7:150412456-150412713	chr7	+	150412463	150412761	True	NM_130759,NM_001199577,NR_024115	chr7,chr7,chr7	+,+,-	GIMAP1,GIMAP1-GIMAP5,GIMAP6	883,883,-82783
chr3:186332494-186332860	chr3	+	186332514	186332888	True	NM_001622,NM_001134415	chr3,chr3	+,-	AHSG,TBCCD1	-1715,-44182
chr13:113240475-113241105	chr13	+	113240678	113241080	True	NM_207440,NM_006322	chr13,chr13	+,-	C13orf35,TUBGCP3	60277,1451
chr15:75118231-75118684	chr15	+	75118245	75118705	True	NM_001030005,NM_001099436	chr15,chr15	+,-	CPLX3,ULK3	245,16897
chr5:69706535-69707751	chr5	+	69706921	69707741	True	NR_033417,NR_033968	chr5,chr5	+,-	GTF2H2B,LOC100049076	3455,143467
chr5:69706535-69707751	chr5	-	70366956	70367776	False	NM_022877,NM_001515	chr5,chr5	+,-	SMN2,GTF2H2	-146247,-3459
chr5:69706535-69707751	chr5	+	68851775	68852595	False	NR_027439,NM_001042490,NM_001098728	chr5,chr5,chr5	-,+,+	LOC100272216,GTF2H2D,GTF2H2C	76491,3478,3455
chr17:34088660-34090063	chr17	+	34088713	34089737	True	NM_145272,NM_139285	chr17,chr17	+,-	C17orf50,GAS2L2	-848,-8816
chr4:25544250-25545688	chr4	+	25544921	25545505	True	NM_015187,NM_001177998	chr4,chr4	-,+	SEL1L3,SLC34A2	319167,111929
chr19:19429953-19431037	chr19	+	19430107	19430900	True	NM_172231,NM_015329	chr19,chr19	-,+	SUGP1,MAU2	457,729
chr5:131411570-131412028	chr5	+	131411574	131412068	True	NM_001205250,NM_000758	chr5,chr5	-,+	ACSL6,CSF2	-63813,-2140
chr7:105312558-105313746	chr7	+	105312903	105313792	True	NM_138495,NM_021930	chr7,chr7	-,+	ATXN7L1,RINT1	5867,-140434
chr17:6916366-6916682	chr17	+	6916561	6916687	True	NR_030178,NM_174893,NM_001004333,NM_001142798,NM_001142799,NR_037715,NR_037716,NR_037717,NR_029712,NM_181844	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,+,+,+,+,+,+,-,+	MIR497,C17orf49,RNASEK,C17orf49,C17orf49,RNASEK,RNASEK,RNASEK-C17ORF49,MIR195,BCL6B	4704,1368,-877,1368,1368,-877,-877,-877,4383,9681
chr5:769027-770170	chr5	+	769343	770145	True	NM_001166260,NM_007030	chr5,chr5	+,-	TRIP13,TPPP	122823,-75833
chr5:769027-770170	chr5	+	880302	880745	False	NM_001009877,NM_001166260	chr5,chr5	-,+	BRD9,TRIP13	11984,12223
chr11:66674920-66676457	chr11	+	66675005	66676185	True	NM_024036,NM_022172	chr11,chr11	+,-	LRFN4,PC	-50180,75
chr15:52821561-52821765	chr15	+	52821595	52821813	True	NM_001142495,NM_002748,NM_000259	chr15,chr15,chr15	-,+,-	MYO5A,MAPK6,MYO5A	-348,-510235,-348
chr1:9351685-9352498	chr1	+	9351838	9352224	True	NM_025106,NR_029610	chr1,chr1	+,-	SPSB1,MIR34A	716,-140002
chr11:33561394-33563244	chr11	+	33561539	33563087	True	NM_012194,NM_001166692	chr11,chr11	+,-	C11orf41,C11orf91	789,159254
chr14:92573594-92575051	chr14	+	92573912	92574655	True	NM_001164776,NM_001164777,NR_028453,NR_028457,NR_028456,NR_028455,NR_028454,NM_001164778,NM_001164779,NR_028459,NR_028458,NR_028470,NM_017437,NR_031765,NM_001164781,NM_001164780,NM_001164782,NM_004993,NR_028468,NR_028469,NR_028466,NR_028467,NR_028464,NR_028465,NR_028462,NR_028463,NR_028460,NR_028461,NM_030660,NM_001127696,NM_001127697,NM_001164774	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	-,-,-,-,-,-,-,-,-,-,-,-,+,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-	ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,CPSF2,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3	-947,-947,-947,-947,-947,-947,-947,-947,-947,-947,-947,-947,13642,-947,-947,-947,-947,-947,-947,-947,-947,-947,-947,-947,-947,-947,-947,-947,-947,-947,-947,-947
chr3:128224063-128225822	chr3	+	128224124	128225364	True	NR_026954,NM_032638	chr3,chr3	+,-	LOC90246,GATA2	1313,-12094
chr12:4383505-4383870	chr12	+	4383507	4383755	True	NM_001759,NM_020638	chr12,chr12	+,-	CCND2,FGF23	-656,105189
chr3:179283737-179284568	chr3	+	179283736	179284468	True	NM_177989,NM_020409,NM_004301,NM_178042	chr3,chr3,chr3,chr3	+,-,+,+	ACTL6A,MRPL47,ACTL6A,ACTL6A	-3079,38018,-3079,-3079
chr18:54305962-54306193	chr18	+	54305964	54306194	True	NM_015285,NM_004786,NR_024546	chr18,chr18,chr18	+,-,-	WDR7,TXNL1,TXNL1	12421,-44,-44
chr14:67820501-67822356	chr14	+	67820859	67822017	True	NM_004094,NM_015994	chr14,chr14	+,-	EIF2S1,ATP6V1D	5016,4764
chr4:71526259-71527879	chr4	+	71526440	71527897	True	NM_144646,NM_020368	chr4,chr4	-,+	IGJ,UTP3	4501,26298
chr16:740758-741794	chr16	+	741084	741424	True	NM_032259,NM_005861,NM_001005920	chr16,chr16,chr16	-,+,-	WDR24,STUB1,JMJD8	-684,-11020,-6645
chr5:44389012-44389605	chr5	+	44389138	44389540	True	NM_004465,NM_016640	chr5,chr5	-,+	FGF10,MRPS30	-354,419486
chr3:15140772-15141109	chr3	+	15140837	15141111	True	NM_022340,NM_014296	chr3,chr3	-,+	ZFYVE20,CAPN7	-182,106621
chr19:49568924-49569240	chr19	+	49568930	49569044	True	NM_031886,NM_006179,NM_033142,NM_003089	chr19,chr19,chr19,chr19	-,-,-,+	KCNA7,NTF4,CGB7,SNRNP70	7204,-1806,-9933,19420
chr7:138819947-138820964	chr7	+	138820054	138821013	True	NM_001144923,NM_024926,NM_001144920,NM_024625	chr7,chr7,chr7,chr7	+,+,+,-	TTC26,TTC26,TTC26,ZC3HAV1	-1624,-1624,-1624,-25589
chr20:34358604-34359482	chr20	+	34359258	34359514	True	NM_184234,NM_016436	chr20,chr20	-,+	RBM39,PHF20	-29065,408
chr19:34398402-34400310	chr19	+	34398401	34399875	True	NM_001166057,NM_024076	chr19,chr19	-,+	PEPD,KCTD15	-385602,-110701
chr7:22895644-22897260	chr7	+	22895689	22896962	True	NM_019059,NR_003075	chr7,chr7	-,+	TOMM7,SNORD93	-33268,32
chr3:125314980-125315486	chr3	+	125314980	125315298	True	NM_022776,NR_024250	chr3,chr3	-,+	OSBPL11,LOC100125556	-599,320145
chr19:3048151-3048604	chr19	+	3048245	3048497	True	NM_001144761,NM_002067	chr19,chr19	-,+	TLE2,GNA11	-612,45910
chr1:247505653-247506238	chr1	+	247505936	247506228	True	NM_032752,NM_001079821	chr1,chr1	-,+	ZNF496,NLRP3	-10891,73229
chr17:30451756-30452853	chr17	+	30452049	30452897	True	NM_001033566,NR_002222	chr17,chr17	+,-	RHOT1,ARGFXP2	16575,25743
chr4:48986387-48987642	chr4	+	48986855	48987590	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	674,-78040
chr10:27224489-27225468	chr10	+	27224562	27225496	True	NR_026795,NM_001172303	chr10,chr10	-,+	NCRNA00202,MASTL	5484,218256
chr5:37086840-37087475	chr5	+	37086862	37087388	True	NM_133433,NM_023073	chr5,chr5	+,-	NIPBL,C5orf42	-210053,162192
chr3:68684182-68685028	chr3	+	68684306	68684814	True	NM_006407,NM_001005527	chr3,chr3	+,-	ARL6IP5,FAM19A4	449275,296947
chr8:53478720-53479604	chr8	+	53478787	53479622	True	NM_207413,NM_005285	chr8,chr8	-,+	FAM150A,NPBWR1	-766,372845
chr4:37826079-37826352	chr4	+	37826242	37826347	True	NM_001085400,NM_018290	chr4,chr4	-,+	RELL1,PGM2	-138243,1934
chr1:168260902-168261822	chr1	+	168260909	168261828	True	NR_026844,NM_005149	chr1,chr1	-,+	ANKRD36BP1,TBX19	-44241,-10682
chr17:81011151-81012060	chr17	+	81011318	81011976	True	NM_001004431	chr17	+	METRNL	25590
chr11:110169561-110171112	chr11	+	110169659	110170994	True	NM_002906,NM_004109	chr11,chr11	-,+	RDX,FDX1	-2222,129599
chr14:89057636-89059402	chr14	+	89057892	89059215	True	NM_207662,NM_007039	chr14,chr14	+,-	ZC3H14,PTPN21	1514,-36769
chr2:91756208-91757012	chr2	+	91756239	91756852	True	NR_003503,NR_027238	chr2,chr2	+,-	GGT8P,LOC654342	206515,91173
chr20:33567620-33568206	chr20	+	33567853	33568013	True	NR_030223,NM_000178	chr20,chr20	+,-	MIR499,GSS	10165,-24252
chr8:145833895-145835816	chr8	+	145834092	145835663	True	NM_014665,NM_025251	chr8,chr8	+,-	LRRC14,ARHGAP39	-90792,3283
chr14:73458190-73458705	chr14	+	73458196	73458438	True	NM_178441,NM_181341	chr14,chr14	-,+	ZFYVE1,DCAF4	-4532,-65211
chr19:49588007-49588409	chr19	+	49588194	49588430	True	NM_031886,NM_003089	chr19,chr19	-,+	KCNA7,SNRNP70	-11996,34
chr1:31539300-31539808	chr1	+	31539457	31539655	True	NM_001020658,NM_014676,NR_002762	chr1,chr1,chr1	-,-,+	PUM1,PUM1,PRO0611	-893,-893,-78603
chr21:45139662-45140130	chr21	+	45139679	45140113	True	NM_003681,NM_000100	chr21,chr21	+,-	PDXK,CSTB	-752,56196
chrX:77226091-77227940	chrX	+	77226345	77227278	True	NM_001029891,NM_000052	chrX,chrX	-,+	PGAM4,ATP7A	-1210,-60210
chr15:74287200-74287558	chr15	+	74287338	74287418	True	NM_004809,NM_033238,NM_033239,NM_033250,NM_002675,NM_033247,NM_033246,NM_033244,NM_033240,NM_033249	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,+,+,+,+,+,+,+,+,+	STOML1,PML,PML,PML,PML,PML,PML,PML,PML,PML	-2703,-375,-375,-375,-375,-375,-375,-375,-375,-375
chr20:33289981-33290338	chr20	+	33290023	33290349	True	NM_080476,NM_021202	chr20,chr20	-,+	PIGU,TP53INP2	-24934,1798
chr1:63835019-63835782	chr1	+	63835330	63835490	True	NM_014288,NM_013339	chr1,chr1	-,+	ITGB3BP,ALG6	153399,-2121
chr2:98352196-98352719	chr2	+	98352488	98352737	True	NM_005735,NM_207519	chr2,chr2	-,+	ACTR1B,ZAP70	-71927,-1671
chr16:81130588-81130840	chr16	+	81130594	81130821	True	NM_004483,NR_033249,NR_033247,NM_015251	chr16,chr16,chr16,chr16	-,-,-,+	GCSH,GCSH,LOC100329108,ATMIN	-614,-614,-640,-61187
chr7:128472873-128473847	chr7	+	128473000	128473848	True	NM_001127487,NM_001708,NM_001458	chr7,chr7,chr7	+,-,+	FLNC,OPN1SW,FLNC	-2568,-57156,-2568
chr2:55646460-55646847	chr2	+	55646554	55646708	True	NM_080667,NM_001135597,NM_018084	chr2,chr2,chr2	+,-,-	CCDC104,CCDC88A,CCDC88A	100031,399,399
chr2:241501160-241501568	chr2	+	241501182	241501488	True	NM_016552,NM_017844,NM_001033575,NM_018226	chr2,chr2,chr2,chr2	-,-,+,+	ANKMY1,ANKMY1,DUSP28,RNPEPL1	-3777,-3777,-1766,6515
chr4:25247285-25247541	chr4	+	25247359	25247501	True	NM_018323,NM_016955	chr4,chr4	+,-	PI4K2B,SEPSECS	-11757,-85155
chr20:61584446-61584830	chr20	+	61584552	61584866	True	NM_022105,NM_022082	chr20,chr20	-,+	DIDO1,SLC17A9	-15248,-604
chr1:225638275-225638561	chr1	+	225638391	225638597	True	NM_194442,NM_001130440	chr1,chr1	-,+	LBR,SRP9	-21834,326917
chr3:128204677-128205160	chr3	+	128204759	128205205	True	NM_001145662,NM_001145661,NR_026954,NM_032638	chr3,chr3,chr3,chr3	-,-,+,-	GATA2,GATA2,LOC90246,GATA2	1609,2218,21472,6875
chr2:187481298-187482100	chr2	+	187481460	187482101	True	NM_182521,NM_001144999	chr2,chr2	-,+	ZSWIM2,ITGAV	231846,-16590
chr17:43210298-43210514	chr17	+	43210353	43210521	True	NM_024722,NM_001135704,NM_001135707,NM_001135706,NM_001135705,NM_133373	chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,-	ACBD4,ACBD4,ACBD4,ACBD4,ACBD4,PLCD3	2492,-437,2492,2492,2492,-462
chr1:109756265-109756469	chr1	+	109756323	109756385	True	NM_006513,NM_001005290,NR_034072	chr1,chr1,chr1	+,-,+	SARS,PSRC1,SARS	129,69455,129
chr20:23969626-23969830	chr20	+	23969753	23969821	True	NM_178312,NM_178311,NR_001279	chr20,chr20,chr20	-,-,+	GGTLC1,GGTLC1,CSTT	-2241,-337,-470021
chr2:136589640-136590718	chr2	+	136590395	136590754	True	NM_002299,NM_014607	chr2,chr2	-,+	LCT,UBXN4	4046,-91270
chr11:5472971-5473454	chr11	+	5473047	5473453	True	NM_001004754,NM_001005288	chr11,chr11	+,-	OR51I2,OR51I1	1184,-10264
chr6:119400033-119400386	chr6	+	119400147	119400309	True	NR_030315,NM_024581,NM_014034	chr6,chr6,chr6	-,-,+	MIR548B,FAM184A,ASF1A	-9839,-335,-184957
chr20:30779517-30781146	chr20	+	30779529	30780777	True	NR_002781,NM_172236	chr20,chr20	-,+	TSPY26P,POFUT1	-1366,14918
chr4:3250695-3250962	chr4	+	3250732	3250896	True	NM_001042690,NM_002337	chr4,chr4	+,-	C4orf44,LRPAP1	-16,283380
chr6:109804877-109805761	chr6	+	109805008	109805796	True	NM_014797,NM_003080,NM_001164313	chr6,chr6,chr6	-,+,-	ZBTB24,SMPD2,ZBTB24	-568,-43135,-568
chr19:38879716-38879944	chr19	+	38879831	38879903	True	NM_001042522,NM_001039616,NM_152657	chr19,chr19,chr19	+,+,-	SPRED3,SPRED3,GGN	1035,1035,-1163
chr3:77120518-77121096	chr3	+	77120551	77121060	True	NM_001128929,NM_001128223	chr3,chr3	+,-	ROBO2,ZNF717	26102,-1286296
chr15:25456235-25456895	chr15	+	25456361	25456819	True	NR_003315,NR_003314,NR_003313,NR_003312,NR_003311,NR_003310,NR_003496,NR_022010,NR_003309,NM_130838,NR_003342,NR_003343,NR_003307,NR_003495	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,-,+,+,+,+	SNORD115-23,SNORD115-22,SNORD115-21,SNORD115-20,SNORD115-19,SNORD115-18,HBII-52-27,PAR4,SNORD115-17,UBE3A,SNORD115-25,SNORD115-26,SNORD115-15,SNORD115-24	123,-1347,-5003,-5003,-6908,-6908,8830,19,-6908,193884,3868,6944,-5003,1986
chr20:43439446-43439648	chr20	+	43439505	43439639	True	NM_182970,NM_022358	chr20,chr20	-,+	RIMS4,KCNK15	-593,-65068
chr10:127512603-127513248	chr10	+	127512686	127513266	True	NM_000375,NM_016567,NM_078468,NM_078469	chr10,chr10,chr10,chr10	-,+,+,+	UROS,BCCIP,BCCIP,BCCIP	-849,-633,-633,-633
chr3:139013510-139013847	chr3	+	139013712	139013896	True	NR_027070,NM_020191	chr3,chr3	-,+	PISRT1,MRPS22	-61348,48964
chr2:177029878-177030148	chr2	+	177029903	177030125	True	NR_033979,NM_006898	chr2,chr2	-,+	LOC401022,HOXD3	23611,-1149
chr18:30350240-30350540	chr18	+	30350364	30350518	True	NR_003558,NM_020805	chr18,chr18	+,-	WBP11P1,KLHL14	-258789,2506
chrX:85645714-85646004	chrX	+	85645877	85646018	True	NM_001145414,NM_001139515	chrX,chrX	-,+	CHM,DACH2	-343311,-127960
chr11:108093236-108093558	chr11	+	108093278	108093490	True	NM_000051,NM_002519	chr11,chr11	+,-	ATM,NPAT	68,3
chr6:17992262-17993365	chr6	+	17992424	17993400	True	NM_001105568,NM_153042,NM_022113,NM_001105566,NM_001105567	chr6,chr6,chr6,chr6,chr6	-,+,-,-,-	KIF13A,KDM1B,KIF13A,KIF13A,KIF13A	-4625,162218,-4625,-4625,-4625
chr10:135266560-135267145	chr10	+	135266819	135267005	True	NR_002934,NM_001012508	chr10,chr10	+,-	LOC619207,SPRN	426,-28698
chr8:74890847-74891557	chr8	+	74890953	74891211	True	NM_001204858,NM_001204859,NM_001204857,NM_017866,NM_001204861,NR_033334,NM_001204863,NM_001204862,NM_005648,NM_001204860,NM_001204864,NM_001040613	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,+,-,+,-,-,-,-,-,+	TCEB1,TCEB1,TCEB1,TMEM70,TCEB1,TMEM70,TCEB1,TCEB1,TCEB1,TCEB1,TCEB1,TMEM70	-6431,-6431,-6431,-2633,-6810,-2633,-6431,-6810,-6431,-6431,-6431,-2633
chr3:11684867-11685337	chr3	+	11684884	11685227	True	NM_001128219,NM_003178	chr3,chr3	-,+	VGLL4,SYN2	221,360634
chr5:70361181-70362450	chr5	+	70361681	70362499	True	NM_022877,NM_001515	chr5,chr5	+,-	SMN2,GTF2H2	-140970,1048
chr5:70361181-70362450	chr5	-	69712198	69713016	False	NR_033417,NR_033968	chr5,chr5	+,-	GTF2H2B,LOC100049076	-1052,138190
chr5:70361181-70362450	chr5	-	68857394	68857867	False	NR_027439,NM_001042490,NM_001098728	chr5,chr5,chr5	-,+,+	LOC100272216,GTF2H2D,GTF2H2C	71217,-1376,-1399
chr11:68082773-68083062	chr11	+	68082772	68083086	True	NM_022338,NM_002335	chr11,chr11	-,+	C11orf24,LRP5	-43303,-2717
chr4:93226824-93228702	chr4	+	93226954	93228583	True	NM_183049,NM_001510	chr4,chr4	-,+	TMSL3,GRID2	-1466685,-1456
chr17:78391695-78392325	chr17	+	78391770	78392353	True	NM_001164637,NR_029376,NM_001164638,NM_173627	chr17,chr17,chr17,chr17	+,-,+,+	FLJ35220,LOC100294362,FLJ35220,FLJ35220	-2855,-2802,-2855,-2855
chr2:75770436-75770915	chr2	+	75770448	75770586	True	NM_014763,NM_001135032	chr2,chr2	+,-	MRPL19,FAM176A	103322,17562
chrX:47242693-47243136	chrX	+	47243102	47243184	True	NR_003710,NM_007130	chrX,chrX	+,-	SNORA11C,ZNF41	4864,99211
chr20:1094666-1094878	chr20	+	1094682	1094922	True	NM_018354,NM_006814,NM_178578	chr20,chr20,chr20	-,+,+	C20orf46,PSMF1,PSMF1	70245,4317,-827
chr12:56688148-56688643	chr12	+	56688278	56688587	True	NM_004077,NM_001099337	chr12,chr12	-,+	CS,COQ10A	5643,-27262
chr10:32613641-32614700	chr10	+	32613980	32614708	True	NM_025209,NM_001026383	chr10,chr10	-,+	EPC1,CCDC7	21463,120332
chr12:98912230-98913135	chr12	+	98912331	98912648	True	NM_001032284,NM_001032283,NR_027157,NM_003276	chr12,chr12,chr12,chr12	+,+,-,+	TMPO,TMPO,LOC100128191,TMPO	-3038,-3038,-2327,-3038
chr1:209999707-210000684	chr1	+	209999736	210000519	True	NM_006147,NM_014388	chr1,chr1	-,+	IRF6,DIEXF	-20257,792
chr12:52398965-52400004	chr12	+	52399100	52399820	True	NM_181711,NM_001013690	chr12,chr12	+,-	GRASP,FIGNL2	927,-173399
chr1:45805781-45806135	chr1	+	45805783	45806151	True	NM_001128425,NM_012222,NM_025077,NM_001048174,NM_001048173,NM_001048172,NM_001048171	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,+,-,-,-,-	MUTYH,MUTYH,TOE1,MUTYH,MUTYH,MUTYH,MUTYH	41,41,-492,-154,4,4,41
chr9:131938473-131938674	chr9	+	131938551	131938711	True	NM_203434,NM_001193397	chr9,chr9	-,+	IER5L,PPP2R4	1879,-64635
chr11:75112355-75112710	chr11	+	75112563	75112677	True	NM_001005,NM_001039548,NR_000005,NR_000025	chr11,chr11,chr11,chr11	+,-,+,+	RPS3,KLHL35,SNORD15A,SNORD15B	-2066,29057,-1193,2787
chr19:54417797-54418354	chr19	+	54417797	54418344	True	NM_144687,NM_031896	chr19,chr19	-,+	NLRP12,CACNG7	-90149,-1857
chr14:101348222-101348432	chr14	+	101348228	101348458	True	NR_029965,NR_029966,NR_029699,NR_029696,NR_030173,NR_030617,NR_029889,NM_001134888	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,+,+,+,+,-	MIR431,MIR433,MIR136,MIR127,MIR432,MIR665,MIR337,RTL1	-935,-56,2580,857,2361,-6909,-7449,2776
chr12:51609261-51610891	chr12	+	51609357	51610857	True	NR_026893,NM_001136264	chr12,chr12	-,+	POU6F1,DAZAP2	670,21650
chr1:210110276-210111194	chr1	+	210110311	210111196	True	NM_006147,NM_153262,NM_001146264,NR_027459,NM_001146262,NR_027458,NM_001146261	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,+,+,+,+	IRF6,SYT14,SYT14,SYT14,SYT14,SYT14,SYT14	-130832,341,341,341,341,341,341
chr19:30154963-30155486	chr19	+	30154996	30155422	True	NM_001031726,NM_024310	chr19,chr19	-,+	C19orf12,PLEKHF1	50591,904
chr10:51964629-51965745	chr10	+	51964637	51965765	True	NM_018232,NM_001143974	chr10,chr10	+,-	FAM21B,ASAH2	-126802,42663
chr10:51964629-51965745	chr10	+	48019345	48020473	False	NM_018232,NM_002900	chr10,chr10	+,-	FAM21B,RBP3	-125373,370576
chr14:104602673-104603009	chr14	+	104602874	104603014	True	NM_004894,NM_015656	chr14,chr14	-,+	C14orf2,KIF26A	-214971,2045
chr16:67756472-67757597	chr16	+	67756755	67757553	True	NR_027399,NR_027398,NM_030819,NM_001012984	chr16,chr16,chr16,chr16	-,-,-,+	GFOD2,GFOD2,GFOD2,C16orf86	-3482,-3482,-3482,-56093
chr5:88180116-88181328	chr5	+	88180119	88181213	True	NM_006467,NM_002397,NM_001193350	chr5,chr5,chr5	+,-,-	POLR3G,MEF2C,MEF2C	1589467,-836,-836
chr9:27105310-27106800	chr9	+	27105339	27106608	True	NM_000459,NM_022901	chr9,chr9	+,-	TEK,LRRC19	2538,-99648
chr7:105026169-105026477	chr7	+	105026177	105026481	True	NM_182692,NM_021930	chr7,chr7	-,+	SRPK2,RINT1	2910,146050
chr19:18360072-18361160	chr19	+	18360798	18361190	True	NM_000923,NR_036155,NR_036575	chr19,chr19,chr19	-,+,-	PDE4C,MIR3188,LOC729966	-1788,31696,5089
chr10:71033061-71034996	chr10	+	71033397	71034731	True	NM_001057,NM_033497,NM_033500,NM_033498	chr10,chr10,chr10,chr10	-,+,+,+	TACR2,HK1,HK1,HK1	141993,-3692,-3692,-3692
chr13:99736377-99736701	chr13	+	99736483	99736733	True	NM_001130049,NM_015296,NM_001144072	chr13,chr13,chr13	-,-,+	DOCK9,DOCK9,UBAC2	1977,1977,115945
chr5:140209954-140210613	chr5	+	140209996	140210643	True	NM_031849,NM_002109,NM_018908,NM_018909,NM_031848,NM_031501,NM_018910,NM_031852	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,-,+,+,+,+,+,+	PCDHA6,HARS,PCDHA5,PCDHA6,PCDHA6,PCDHA5,PCDHA7,PCDHA7	-2397,-139025,-8686,-2397,-2397,-8686,3325,3325
chr10:60961076-60961987	chr10	+	60961398	60961872	True	NM_001001971,NM_001143774	chr10,chr10	-,+	FAM13C,PHYHIPL	160530,-24235
chr16:813028-813868	chr16	+	813336	813898	True	NM_001025190,NM_005823,NR_030384,NM_001177355,NM_013404	chr16,chr16,chr16,chr16,chr16	-,+,+,+,+	MSLNL,MSLN,MIR662,MSLN,MSLN	19078,-2622,6284,-2621,-2314
chr5:175874163-175874578	chr5	+	175874213	175874617	True	NM_014613,NM_007097	chr5,chr5	+,-	FAF2,CLTB	738,-30673
chr7:33075090-33075871	chr7	+	33075124	33075906	True	NM_016489,NM_001166118,NM_007270	chr7,chr7,chr7	-,-,+	NT5C3,NT5C3,FKBP9	4666,4665,-78186
chr15:50472590-50473201	chr15	+	50472595	50473202	True	NM_003645,NM_001159629,NM_024837	chr15,chr15,chr15	+,+,-	SLC27A2,SLC27A2,ATP8B4	1190,1190,-61176
chr2:242674882-242675223	chr2	+	242674892	242675132	True	NM_152783,NR_033255	chr2,chr2	+,-	D2HGDH,DTYMK	-913,-48509
chr12:122018584-122018895	chr12	+	122018839	122018919	True	NM_032590,NM_032790,NM_001005366	chr12,chr12,chr12	-,+,-	KDM2B,ORAI1,KDM2B	51,45535,-475
chr1:178509183-178510075	chr1	+	178509312	178510050	True	NR_033186,NM_004673	chr1,chr1	+,-	C1orf220,ANGPTL1	1880,330215
chr17:41131667-41131955	chr17	+	41131729	41131911	True	NM_001142653,NM_001136042,NM_025267,NM_173079,NM_001142654	chr17,chr17,chr17,chr17,chr17	-,-,-,+,-	AARSD1,AARSD1,AARSD1,RUNDC1,AARSD1	684,684,159,670,684
chr17:41985406-41985612	chr17	+	41985439	41985576	True	NR_026770,NM_005374	chr17,chr17	+,-	C17orf88,MPP2	8999,-326
chr3:122492456-122494454	chr3	+	122492860	122494116	True	NM_024610,NM_032839	chr3,chr3	-,+	HSPBAP1,DIRC2	18591,19784
chr7:150691007-150691653	chr7	+	150691118	150691648	True	NM_172056,NM_000603,NM_001160110,NM_001160111,NM_001160109	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	KCNH2,NOS3,NOS3,NOS3,NOS3	-15716,-3025,-277,-277,-277
chr15:23206137-23206366	chr15	+	23206217	23206385	True	NR_024074,NR_003521	chr15,chr15	+,-	GOLGA8IP,WHAMML1	48856,2022
chr15:23206137-23206366	chr15	-	28985068	28985236	False	NR_033351,NR_026589	chr15,chr15	-,+	GOLGA8F,WHAMML2	-206925,-2390
chr9:116839727-116840711	chr9	+	116839810	116840752	True	NM_032888,NM_001633	chr9,chr9	+,-	COL27A1,AMBP	77478,50
chr19:10338910-10339114	chr19	+	10339008	10339088	True	NR_036206,NM_004230	chr19,chr19	+,-	MIR4322,S1PR2	2000,2910
chr14:106384581-106384912	chr14	+	106384585	106384829	True	NR_002224,NR_026800	chr14,chr14	-,+	ADAM6,KIAA0125	53579,-798
chr11:119600434-119600791	chr11	+	119600529	119600817	True	NM_203286,NM_203285,NR_034160,NM_002855	chr11,chr11,chr11,chr11	-,-,+,-	PVRL1,PVRL1,LOC100499227,PVRL1	-1094,-1094,-348092,-1094
chr22:39012317-39013391	chr22	+	39012358	39013226	True	NM_001002880,NM_001013647	chr22,chr22	+,-	CBY1,LOC646851	39431,39470
chr10:51835820-51836457	chr10	+	51836198	51836360	True	NM_018232,NM_001005751,NM_001143974	chr10,chr10,chr10	+,+,-	FAM21B,FAM21A,ASAH2	1525,-8574,172060
chr10:51835820-51836457	chr10	+	46231230	46231280	False	NM_174890,NM_015262,NM_001169106,NM_001169107	chr10,chr10,chr10,chr10	-,+,+,+	ANUBL1,FAM21C,FAM21C,FAM21C	-62979,-8633,-8633,-8633
chr20:1642873-1643680	chr20	+	1642921	1643511	True	NM_018556,NM_080816,NM_001039508,NM_001040022	chr20,chr20,chr20,chr20	-,-,-,+	SIRPG,SIRPG,SIRPG,SIRPA	-4496,-4496,-4496,231301
chr3:133525045-133525468	chr3	+	133525073	133525483	True	NM_016577,NM_021203	chr3,chr3	-,+	RAB6B,SRPRB	89258,-22247
chr5:179070896-179071113	chr5	+	179070928	179071002	True	NM_001024649,NM_001142306	chr5,chr5	+,-	CANX,C5orf60	54927,1095
chr11:83378035-83378742	chr11	+	83378047	83378730	True	NM_182603,NM_001142702	chr11,chr11	+,-	ANKRD42,DLG2	-472808,14795
chr18:70529391-70529896	chr18	+	70529395	70529824	True	NM_014177,NM_138999,NM_001201465,NM_138966	chr18,chr18,chr18,chr18	+,-,-,-	C18orf55,NETO1,NETO1,NETO1	1285921,3168,5044,5044
chr2:219924818-219925075	chr2	+	219924832	219925084	True	NR_024385,NM_002181,NR_036081	chr2,chr2,chr2	+,-,-	LOC151300,IHH,MIR3131	-83877,204,-1360
chr7:75932509-75932943	chr7	+	75932541	75932970	True	NM_012479,NM_001540	chr7,chr7	-,+	YWHAG,HSPB1	55422,-717
chr19:53073726-53075369	chr19	+	53073781	53074982	True	NM_001172655,NM_018260,NM_001105549	chr19,chr19,chr19	+,+,-	ZNF701,ZNF701,ZNF83	-49,-306,66719
chr3:180396767-180397113	chr3	+	180396779	180397137	True	NM_133462,NM_181426	chr3,chr3	+,-	TTC14,CCDC39	-76912,196
chr1:38095808-38096047	chr1	+	38095844	38095992	True	NM_001038633,NM_018101	chr1,chr1	-,+	RSPO1,CDCA8	4549,62166
chrX:139586612-139586881	chrX	+	139586616	139586830	True	NR_028345,NM_005634	chrX,chrX	+,-	RP1-177G6.2,SOX3	205093,445
chr11:62105562-62107454	chr11	+	62105597	62107336	True	NM_001083926,NM_206998,NM_025080	chr11,chr11,chr11	+,-,+	ASRGL1,SCGB1D4,ASRGL1	-874,-39061,-874
chr11:72461453-72462163	chr11	+	72461581	72462051	True	NM_001040118,NM_033388	chr11,chr11	-,+	ARAP1,ATG16L2	1433,63399
chr8:91380422-91380985	chr8	+	91380428	91381016	True	NM_001008495,NM_001359	chr8,chr8	-,+	TMEM64,DECR1	277167,-366912
chr4:77020663-77022640	chr4	+	77020688	77022425	True	NM_001179,NM_017426	chr4,chr4	+,-	ART3,NUP54	-24883,47287
chr2:224469377-224469683	chr2	+	224469433	224469700	True	NM_022915,NM_003469	chr2,chr2	+,-	MRPL44,SCG2	352420,-2216
chr3:16981648-16983449	chr3	+	16981878	16983492	True	NM_015184,NM_001351,NR_037465	chr3,chr3,chr3	+,-,+	PLCL2,DAZL,MIR3714	-7355,-334872,-7249
chr1:1142999-1143655	chr1	+	1143002	1143684	True	NM_004195,NM_148901,NM_148902,NM_003327,NM_080605	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	TNFRSF18,TNFRSF18,TNFRSF18,TNFRSF4,B3GALT6	-913,-913,-913,5914,23944
chr10:26996090-26996708	chr10	+	26996124	26996684	True	NM_014317,NM_001012750	chr10,chr10	+,-	PDSS1,ABI1	-9580,153390
chr8:82024457-82024732	chr8	+	82024498	82024665	True	NM_001444,NM_018440	chr8,chr8	+,-	FABP5,PAG1	168052,-195
chr2:42277282-42278702	chr2	+	42277495	42278723	True	NM_138370,NM_004718	chr2,chr2	+,-	PKDCC,COX7A2L	-2385,309683
chr5:176981679-176982158	chr5	+	176981753	176982197	True	NM_001190946,NM_017510,NR_024019	chr5,chr5,chr5	-,+,-	FAM193B,TMED9,FAM193B	-205,37015,-205
chr16:68876327-68876960	chr16	+	68876511	68876829	True	NM_001040146,NM_024562	chr16,chr16	-,+	CHTF8,TMCO7	289295,679
chr1:197872292-197872863	chr1	+	197872416	197872845	True	NM_001014434,NM_001195216,NM_001024594	chr1,chr1,chr1	+,-,+	LHX9,DENND1B,C1orf53	8789,-127793,-797
chrY:3445929-3446454	chrY	+	3446149	3446332	True	NM_003140,NM_139214	chrY,chrY	-,+	SRY,TGIF2LY	-790357,793
chrY:3445929-3446454	chrX	+	89175964	89176108	False	NM_138960,NM_004538	chrX,chrX	+,-	TGIF2LX,NAP1L3	831,3752624
chr22:19472220-19472726	chr22	+	19472220	19472771	True	NM_005659,NM_001178010,NM_001178011,NM_001035247,NM_003504	chr22,chr22,chr22,chr22,chr22	-,+,+,-,+	UFD1L,CDC45,CDC45,UFD1L,CDC45	-5482,-4864,-4864,-5482,-4862
chr2:38302387-38302893	chr2	+	38302472	38302888	True	NR_027252,NM_000104	chr2,chr2	+,-	C2orf58,CYP1B1	55358,485
chr10:6355408-6356699	chr10	+	6355507	6356534	True	NM_004566,NM_000417	chr10,chr10	+,-	PFKFB3,IL2RA	-110718,-251174
chr16:18491688-18492117	chr16	+	18491780	18491918	True	NR_036142,NR_003569,NR_036141,NR_036144	chr16,chr16,chr16,chr16	-,+,-,-	MIR3180-2,ABCC6P1,MIR3180-1,MIR3180-3	4260,90651,4264,4264
chr16:18491688-18492117	chr16	+	2181838	2181913	False	NM_001009944,NM_000296,NR_037467,NM_014353	chr16,chr16,chr16,chr16	-,-,-,+	PKD1,PKD1,MIR3180-5,RAB26	4037,4037,4268,16737
chr16:18491688-18492117	chr16	-	16407943	16408081	False	NR_036447,NR_036142,NR_036141,NM_001079528,NR_036144	chr16,chr16,chr16,chr16,chr16	+,+,+,-,+	PKD1P1,MIR3180-2,MIR3180-1,ABCC6,MIR3180-3	3384,-4262,-4266,-90615,-4266
chr16:18491688-18492117	chr16	-	15009351	15009426	False	NR_036142,NR_023387,NR_036141,NR_036144	chr16,chr16,chr16,chr16	+,-,+,+	MIR3180-2,ABCC6P2,MIR3180-1,MIR3180-3	-4322,-90792,-4326,-4326
chr16:18491688-18492117	chr16	+	15244540	15244678	False	NM_015027,NR_037466	chr16,chr16	+,-	PDXDC1,MIR3180-4	-175758,4235
chr19:55997056-55997696	chr19	+	55997248	55997670	True	NM_024710,NM_001144950,NM_020378,NM_033113,NM_001195267	chr19,chr19,chr19,chr19,chr19	-,+,+,+,+	ISOC2,SSC5D,NAT14,ZNF628,SSC5D	-24199,2199,-742,-9600,2199
chr14:75569348-75569732	chr14	+	75569360	75569449	True	NM_033116,NM_024643	chr14,chr14	-,+	NEK9,FAM164C	24388,-33120
chr11:66882907-66883111	chr11	+	66882948	66883112	True	NM_012308,NM_001040716,NR_027473	chr11,chr11,chr11	+,-,+	KDM2A,PC,KDM2A	3627,-157101,3627
chr16:71661329-71662157	chr16	+	71661449	71662102	True	NM_000353,NM_001017967,NM_052858	chr16,chr16,chr16	-,+,+	TAT,MARVELD3,MARVELD3	-50451,-1431,-1431
chr19:11617110-11617507	chr19	+	11617169	11617346	True	NM_138783,NM_001299	chr19,chr19	-,+	ZNF653,CNN1	-431,32232
chr7:102210900-102212055	chr7	+	102211109	102212101	True	NM_001166339,NM_001097615	chr7,chr7	+,-	SPDYE2L,POLR2J3	-19481,1017
chr7:102210900-102212055	chr7	+	44057324	44057844	False	NM_175064,NR_003655	chr7,chr7	+,-	SPDYE1,POLR2J4	-16886,954
chr7:102210900-102212055	chr7	+	102117919	102118438	False	NM_006234,NM_152892	chr7,chr7	-,+	POLR2J,LRWD1	993,-12580
chr7:102210900-102212055	chr7	+	102310189	102311181	False	NM_032959,NM_001166339	chr7,chr7	-,+	POLR2J2,SPDYE2L	1051,-19468
chr2:105058253-105058715	chr2	+	105058256	105058746	True	NR_015399,NR_037885	chr2,chr2	+,-	LOC150568,LOC100287010	-7508,-33466
chr17:9548118-9548322	chr17	+	9548117	9548335	True	NM_153210,NR_033656	chr17,chr17	+,-	USP43,STX8	614,-68842
chr13:41321901-41322384	chr13	+	41322019	41322288	True	NR_031723,NM_014252	chr13,chr13	-,+	MIR320D1,SLC25A15	-20008,41258
chr9:79520210-79520901	chr9	+	79520211	79520876	True	NM_001013735,NM_015225	chr9,chr9	+,-	FOXB2,PRUNE2	113694,180
chr5:131594223-131594603	chr5	+	131594242	131594642	True	NM_001131027,NM_001142599,NM_003687	chr5,chr5,chr5	+,-,+	PDLIM4,P4HA2,PDLIM4	-942,-30686,-942
chr1:109825505-109825758	chr1	+	109825696	109825772	True	NM_001408,NM_001005290,NM_032636,NM_001032291	chr1,chr1,chr1,chr1	+,-,-,-	CELSR2,PSRC1,PSRC1,PSRC1	-33106,68,68,68
chr4:93103777-93104372	chr4	+	93103776	93104410	True	NM_183049,NM_001510	chr4,chr4	-,+	TMSL3,GRID2	-1343507,121139
chr9:22009413-22010688	chr9	+	22009508	22010670	True	NR_003529,NM_004936,NM_078487	chr9,chr9,chr9	+,-,-	CDKN2B-AS1,CDKN2B,CDKN2B	-14769,-196,-196
chr13:47127319-47127521	chr13	+	47127405	47127465	True	NM_001164213,NM_001164211,NM_025113,NM_015116	chr13,chr13,chr13,chr13	+,+,-,+	LRCH1,LRCH1,C13orf18,LRCH1	-160,-160,-165770,-160
chr3:123154828-123155885	chr3	+	123155604	123155840	True	NM_012430,NM_183357	chr3,chr3	+,-	SEC22A,ADCY5	-234893,11602
chr17:16750504-16751414	chr17	+	16750663	16751225	True	NR_026810,NR_029392	chr17,chr17	+,-	FAM106C,KRT16P2	-58657,-14516
chr17:16750504-16751414	chr17	+	28900457	28900507	False	NM_206832,NR_015341	chr17,chr17	-,+	TMIGD1,LRRC37BP1	-239392,2975
chr17:16750504-16751414	chr17	-	18328134	18328442	False	NM_148918,NR_001443	chr17,chr17	-,+	SHMT1,LOC339240	-61278,-2690
chr17:16750504-16751414	chr17	+	20422591	20422899	False	NM_001190790,NR_029393	chr17,chr17	+,-	CDRT15L2,KRT16P3	60137,-14780
chr15:75072610-75072960	chr15	+	75072696	75072940	True	NM_000499,NM_001127190,NM_004383	chr15,chr15,chr15	-,+,+	CYP1A1,CSK,CSK	-54819,1484,1484
chr19:41387807-41388009	chr19	+	41387919	41387993	True	NM_030589,NR_001278,NM_000764	chr19,chr19,chr19	-,+,-	CYP2A7,CYP2B7P1,CYP2A7	714,42176,714
chr14:63589722-63590259	chr14	+	63589785	63590247	True	NM_172376,NM_020663	chr14,chr14	-,+	KCNH5,RHOJ	-21201,80897
chr11:13487195-13488054	chr11	+	13487307	13488006	True	NM_001178,NM_032320	chr11,chr11	+,-	ARNTL,BTBD10	-188043,-2469
chr2:127862025-127862493	chr2	+	127862039	127862459	True	NM_000312,NM_139350,NM_004305,NM_139347,NM_139346,NM_139345,NM_139344,NM_139343,NM_139351,NM_139349,NM_139348	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-,-,-,-,-,-	PROC,BIN1,BIN1,BIN1,BIN1,BIN1,BIN1,BIN1,BIN1,BIN1,BIN1	313536,2455,2455,2455,2455,2455,2455,2455,2455,2455,2455
chrX:64626812-64627081	chr9	-	84304075	84304163	False	NM_005077,NR_026851	chr9,chr9	-,+	TLE1,FAM75D5	-479,224188
chrX:64626812-64627081	chrX	+	64626817	64626949	True	NM_001010888,NM_001170649	chrX,chrX	+,-	ZC3H12B,LAS1L	81665,127787
chr19:56894383-56895697	chr19	+	56894414	56895604	True	NM_144690,NR_037161,NR_037160,NR_037159	chr19,chr19,chr19,chr19	-,+,+,+	ZNF582,LOC386758,LOC386758,LOC386758	9335,9440,9440,9440
chr1:39544785-39545496	chr1	+	39544805	39545333	True	NM_017821,NM_012090	chr1,chr1	-,+	RHBDL2,MACF1	-137349,1755
chr11:68748044-68748582	chr11	+	68748134	68748602	True	NM_139075,NM_198923	chr11,chr11	+,-	TPCN2,MRGPRD	67747,15
chr17:25620161-25620398	chr17	+	25620262	25620440	True	NM_015626,NM_000625,NM_134265	chr17,chr17,chr17	+,-,+	WSB1,NOS2,WSB1	665,507165,665
chr12:108910307-108910941	chr12	+	108910371	108910819	True	NM_007076,NM_014706	chr12,chr12	+,-	FICD,SART3	-1371,44396
chr2:101870299-101870881	chr2	+	101870299	101870889	True	NR_003070,NM_017546	chr2,chr2	-,+	SNORD89,C2orf29	18672,-1009
chr20:62180040-62180330	chr20	+	62180128	62180196	True	NM_024059,NM_080823	chr20,chr20	+,-	C20orf195,SRMS	4176,-1271
chr5:169815968-169816212	chr5	+	169815967	169816261	True	NM_004137,NM_001034838	chr5,chr5	-,+	KCNMB1,KCNIP1	427,-35137
chr3:155172926-155174893	chr3	+	155173169	155174756	True	NM_007289,NR_037902	chr3,chr3	+,-	MME,LOC100507537	-375141,-161680
chr6:43399662-43400107	chr6	+	43399664	43399984	True	NM_023932,NM_033450,NM_001198934	chr6,chr6,chr6	-,+,+	DLK2,ABCC10,ABCC10	23352,-226,-4423
chr16:88729787-88730271	chr16	+	88730022	88730314	True	NM_002461,NR_024399,NR_024402	chr16,chr16,chr16	-,+,+	MVD,MGC23284,MGC23284	-527,-292,-292
chr17:27040826-27042436	chr17	+	27041021	27042483	True	NR_024575,NR_024579,NM_000984,NR_000014,NM_152465,NM_001144943,NR_000013,NR_000009,NR_000010,NM_001142625,NM_001144942,NM_001142624,NM_031934	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,+,-,-,+,+,+,-,-,-,-	RAB34,RAB34,RPL23A,SNORD42A,PROCA1,RAB34,SNORD42B,SNORD4B,SNORD4A,RAB34,RAB34,RAB34,RAB34	2818,2818,4516,7963,-2149,2853,5084,8215,7116,2853,2475,2853,2475
chr4:140219627-140219873	chr4	+	140219756	140219824	True	NM_001184987,NM_001184986,NM_001184990,NM_001184991,NM_001184989,NM_001184988,NM_057175,NM_002494	chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4	-,-,-,-,-,-,+,-	NDUFC1,NDUFC1,NDUFC1,NDUFC1,NDUFC1,NDUFC1,NAA15,NDUFC1	3937,2596,3937,2596,3937,3937,2851,2620
chr13:50158700-50159391	chr13	+	50158944	50159300	True	NM_138450,NM_018191	chr13,chr13	+,-	ARL11,RCBTB1	43134,469
chr19:1907991-1908253	chr19	+	1908003	1908301	True	NM_079834,NM_031213,NM_138422	chr19,chr19,chr19	+,-,+	SCAMP4,FAM108A1,ADAT3	-2681,-22485,-2637
chr19:58238340-58238738	chr19	+	58238392	58238738	True	NM_173632,NM_024833	chr19,chr19	+,-	ZNF776,ZNF671	19425,307
chr20:57767863-57768414	chr20	+	57767867	57768267	True	NR_037930,NM_178457	chr20,chr20	-,+	SLMO2-ATP5E,ZNF831	-149966,-1843
chr9:138531218-138532259	chr9	+	138531268	138532170	True	NM_001001676,NM_182974	chr9,chr9	+,-	LCN9,GLT6D1	22997,40
chr1:41949377-41950431	chr1	+	41949487	41950365	True	NM_001956,NR_037868	chr1,chr1	-,+	EDN2,LOC100507178	29,-469276
chr5:113811435-113812076	chr5	+	113811453	113812124	True	NM_170775,NM_018700	chr5,chr5	+,-	KCNN2,TRIM36	-42278,704170
chr11:48328181-48328463	chr11	+	48328258	48328472	True	NM_001004725,NM_001005513	chr11,chr11	+,-	OR4S1,OR4C45	-534,45577
chr19:58617200-58617874	chr19	+	58617377	58617697	True	NM_001145543,NM_007134,NM_001145544,NM_023926	chr19,chr19,chr19,chr19	-,+,-,-	ZSCAN18,ZNF135,ZSCAN18,ZSCAN18	-7647,-46831,-7647,-7647
chr13:53076448-53077944	chr13	+	53076588	53077863	True	NM_016075,NR_002793	chr13,chr13	-,+	VPS36,TPTE2P3	-51825,-13511
chr5:147799296-147800820	chr5	+	147799302	147800383	True	NM_205836,NM_001040169	chr5,chr5	+,-	FBXO38,HTR4	-35811,216292
chr1:238055546-238056106	chr1	+	238055607	238056140	True	NR_027247,NM_021186	chr1,chr1	+,-	LOC100130331,ZP4	-30203,-1385
chr3:157155083-157155449	chr3	+	157155082	157155396	True	NM_002852,NM_001167917	chr3,chr3	+,-	PTX3,VEPH1	-560,57949
chr19:46972524-46973133	chr19	+	46972655	46973169	True	NM_006247,NM_018215,NM_001103149	chr19,chr19,chr19	+,-,-	PPP5C,PNMAL1,PNMAL1	-122455,1701,1701
chr11:65645938-65646551	chr11	+	65646434	65646604	True	NR_037718,NM_198897,NM_004214,NM_016938,NM_001335	chr11,chr11,chr11,chr11,chr11	-,-,-,-,+	EFEMP2,FIBP,FIBP,EFEMP2,CTSW	-6029,9460,9460,-6029,679
chr10:106401724-106401939	chr10	+	106401867	106401933	True	NM_033397,NM_014978	chr10,chr10	-,+	ITPRIP,SORCS3	-308204,-1060
chr1:187521616-187522417	chr1	+	187522160	187522318	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-872601,-724180
chr19:10421241-10422022	chr19	+	10421296	10422048	True	NM_001031734,NM_001103167,NM_003259	chr19,chr19,chr19	-,-,+	FDX1L,ZGLP1,ICAM5	4693,-1063,-20692
chr7:96335249-96335728	chr7	+	96335296	96335605	True	NM_005222,NM_006304	chr7,chr7	+,-	DLX6,SHFM1	299684,3655
chr7:23530450-23531368	chr7	+	23530481	23531307	True	NM_006547,NR_026676	chr7,chr7	-,+	IGF2BP3,RPS2P32	-20486,-525
chr14:23504731-23505069	chr14	+	23504745	23505104	True	NM_001144932,NM_001099780,NM_002797,NM_001130725	chr14,chr14,chr14,chr14	-,+,-,-	PSMB5,PSMB11,PSMB5,PSMB5	-391,6271,-391,-316
chr7:112578895-112579208	chr7	+	112578925	112579237	True	NM_152556,NM_182597	chr7,chr7	-,+	C7orf60,C7orf53	745,-457910
chr3:134092669-134092913	chr3	+	134092678	134092930	True	NM_001042383,NM_016201	chr3,chr3	+,-	CEP63,AMOTL2	111644,526
chr2:130903324-130904744	chr2	+	130903528	130904100	True	NM_207310,NR_033903	chr2,chr2	-,+	CCDC74B,LOC285103	-897,-16384
chr5:37836460-37836774	chr5	+	37836507	37836681	True	NM_152403,NM_000514,NM_001190469,NM_001190468,NM_199231	chr5,chr5,chr5,chr5,chr5	+,-,-,-,-	EGFLAM,GDNF,GDNF,GDNF,GDNF	421851,3151,-578,-578,-914
chr13:53313089-53313313	chr13	+	53313208	53313270	True	NR_031582,NM_007015,NM_001011705	chr13,chr13,chr13	+,-,-	MIR759,LECT1,LECT1	70914,727,727
chr15:65718040-65719483	chr15	+	65718145	65719026	True	NM_020962,NM_016395	chr15,chr15	-,+	IGDCC4,PTPLAD1	-2735,103800
chr22:21621944-21622197	chr22	+	21621944	21622192	True	NR_024583,NR_002829	chr22,chr22	+,-	POM121L8P,P2RX6P	14521,-223406
chr22:21621944-21622197	chr22	+	18820703	18820949	False	NM_005675,NR_003267	chr22,chr22	+,-	DGCR6,GGT3P	72786,-41229
chr22:21621944-21622197	chr22	-	21496917	21497165	False	NR_037566,NR_002829	chr22,chr22	+,-	BCRP2,P2RX6P	-39663,-98379
chr5:776571-777410	chr5	+	776683	777429	True	NM_001166260,NM_024786	chr5,chr5	+,-	TRIP13,ZDHHC11	115539,73722
chr11:6664202-6664411	chr11	+	6664247	6664403	True	NM_001014795,NM_003737	chr11,chr11	+,-	ILK,DCHS1	-39091,12721
chr12:52964551-52965766	chr12	+	52964578	52965798	True	NM_175053,NM_002284	chr12,chr12	-,+	KRT74,KRT86	1861,-268980
chr11:3015439-3015733	chr11	+	3015485	3015697	True	NM_005969,NM_002555	chr11,chr11	-,+	NAP1L4,SLC22A18	-1878,-92024
chr16:85342713-85343135	chr16	+	85342713	85343185	True	NR_033984,NM_198491	chr16,chr16	+,-	LOC400548,FAM92B	-172008,-196599
chr6:1391142-1391494	chr6	+	1391153	1391539	True	NM_001452,NR_027116	chr6,chr6	+,-	FOXF2,LOC285768	-1135,-289586
chr3:107563098-107563791	chr3	+	107563269	107563791	True	NR_015414,NR_015394	chr3,chr3	-,+	LOC151658,LOC285205	33174,38260
chr7:29870458-29871332	chr7	+	29870459	29871329	True	NM_001080529,NR_027347	chr7,chr7	+,-	WIPF3,LOC100271874	3011,-145022
chr22:42085836-42086789	chr22	+	42085999	42086643	True	NM_001003796,NM_001142964,NM_152513,NM_005008	chr22,chr22,chr22,chr22	-,+,+,-	NHP2L1,C22orf46,MEI1,NHP2L1	-1086,73,8874,-7443
chr16:1289266-1289547	chr16	+	1289313	1289527	True	NM_024164,NM_003294	chr16,chr16	-,+	TPSB2,TPSAB1	-9128,1150
chr16:1289266-1289547	chr16	-	1281857	1282071	False	NM_012467,NM_024164,NM_003294	chr16,chr16,chr16	-,-,+	TPSG1,TPSB2,TPSAB1	-6603,-1672,8606
chr16:1289266-1289547	chr16	+	1304347	1304561	False	NM_024164,NM_012217	chr16,chr16	-,+	TPSB2,TPSD1	-24162,1711
chr8:24208117-24209003	chr8	+	24208290	24209004	True	NM_003155,NM_001145271	chr8,chr8	-,+	STC1,ADAMDEC1	-495970,32793
chr21:37952754-37953856	chr21	+	37952881	37953627	True	NM_001146077,NM_009586	chr21,chr21	-,+	CLDN14,SIM2	-4014,118363
chr7:76608462-76609019	chr7	+	76608472	76609004	True	NR_023383,NM_006682	chr7,chr7	+,-	PMS2P11,FGL2	1134,220196
chr7:76608462-76609019	chr7	+	76110798	76110892	False	NR_003262,NM_001102596	chr7,chr7	-,+	FDPSL2A,DTX2	-6481,-1024
chr17:17399979-17400192	chr17	+	17400077	17400155	True	NM_016084,NM_018019,NM_001199989	chr17,chr17,chr17	-,+,-	RASD1,MED9,RASD1	-368,-19828,-368
chr19:16126822-16127603	chr19	+	16127058	16127444	True	NR_026828,NM_021187	chr19,chr19	+,-	LOC126536,CYP4F11	-665,-81382
chrX:151869694-151870083	chrX	+	151869734	151869956	True	NM_001129826,NM_005363,NM_001129828,NM_175868,NM_004909,NM_001080848	chrX,chrX,chrX,chrX,chrX,chrX	-,+,-,+,-,-	CSAG3,MAGEA6,CSAG3,MAGEA6,CSAG2,CSAG2	7764,-2540,7841,-2540,7841,7841
chr22:38240868-38241519	chr22	+	38240910	38241565	True	NR_030395,NM_138797,NM_016091,NR_036556,NR_030396	chr22,chr22,chr22,chr22,chr22	-,-,+,-,-	MIR658,ANKRD54,EIF3L,ANKRD54,MIR659	-532,-557,3804,-557,2267
chr8:29885196-29885552	chr8	+	29885199	29885589	True	NM_016127,NM_015344	chr8,chr8	-,+	TMEM66,LEPROTL1	55110,67332
chr6:159470223-159470437	chr6	+	159470233	159470353	True	NM_054114,NM_152133,NM_138810,NM_032532	chr6,chr6,chr6,chr6	-,-,-,+	TAGAP,TAGAP,TAGAP,FNDC1	-4049,-4049,-4049,120075
chr4:102752348-102754295	chr4	+	102752352	102753873	True	NM_001083907,NM_001130692	chr4,chr4	+,-	BANK1,PPP3CA	-17420,-483724
chr20:31989392-31989878	chr20	+	31989449	31989527	True	NM_016408,NM_001032999,NM_016082	chr20,chr20,chr20	-,+,-	CDK5RAP1,CBFA2T2,CDK5RAP1	-112,88400,-112
chr17:41740206-41741172	chr17	+	41740286	41740954	True	NM_001136483,NM_013999,NM_001040002,NM_004527	chr17,chr17,chr17,chr17	+,-,-,-	C17orf105,MEOX1,MEOX1,MEOX1	116848,-1355,-1024,-1355
chr1:40597779-40598415	chr1	+	40597843	40598381	True	NM_001142604,NM_012421	chr1,chr1	-,+	PPT1,RLF	-34701,28659
chr5:98266574-98267059	chr5	+	98266605	98267115	True	NM_001270,NR_036530	chr5,chr5	-,+	CHD1,LOC100289230	-4367,-1834
chr5:138677530-138677925	chr5	+	138677602	138677968	True	NM_016480,NM_001033112,NM_005847	chr5,chr5,chr5	+,+,-	PAIP2,PAIP2,SLC23A1	-134,165,41121
chr9:35961776-35962237	chr9	+	35961922	35962070	True	NR_024283,NM_019897	chr9,chr9	+,-	LOC158376,OR2S2	-52500,-3771
chr12:6554683-6556397	chr12	+	6554887	6556331	True	NM_001242,NM_018009,NR_015382	chr12,chr12,chr12	+,+,-	CD27,TAPBPL,LOC678655	-894,4845,4406
chrX:102331898-102332473	chrX	+	102331964	102332168	True	NM_018476,NM_001127688	chrX,chrX	-,+	BEX1,BEX4	-12796,137851
chr7:100770091-100771465	chr7	+	100770313	100771454	True	NM_003378,NM_001165413,NM_000602	chr7,chr7,chr7	-,+,+	VGF,SERPINE1,SERPINE1	37448,15,15
chrX:152241166-152241421	chrX	+	152241277	152241469	True	NM_032882,NM_001170944	chrX,chrX	+,+	PNMA6A,LOC100287428	-489,-509
chrX:152241166-152241421	chrX	+	152338739	152338931	False	NM_032882	chrX	-	PNMA6A	-92781
chrX:152241166-152241421	chrX	-	152342789	152342981	False	NM_032882	chrX	-	PNMA6A	-96831
chrX:152241166-152241421	chrX	+	152225265	152225316	False	NM_032882,NM_013364	chrX,chrX	-,+	PNMA6A,PNMA3	20693,-551
chrX:152241166-152241421	chrX	-	152245327	152245519	False	NM_032882,NM_001170944	chrX,chrX	-,+	PNMA6A,LOC100287428	489,-4559
chr16:48663785-48665308	chr16	+	48663971	48665244	True	NM_153029,NM_031490	chr16,chr16	-,+	N4BP1,LONP2	-19851,-385812
chr1:156035903-156036449	chr1	+	156036059	156036449	True	NM_020131,NM_020387	chr1,chr1	-,+	UBQLN4,RAB25	-12543,-5151
chr22:26960030-26960436	chr22	+	26960037	26960467	True	NM_001008566,NR_031615,NM_001886	chr22,chr22,chr22	-,-,+	TPST2,MIR548J,CRYBA4	953,-8748,57460
chr12:120876220-120876808	chr12	+	120876320	120876683	True	NM_016399,NM_004373,NM_176818,NR_033684	chr12,chr12,chr12,chr12	-,+,+,+	TRIAP1,COX6A1,GATC,GATC	7582,-467,7557,7557
chrX:136647772-136647973	chrX	+	136647865	136648007	True	NM_054021,NM_003413	chrX,chrX	-,+	GPR101,ZIC3	-534032,338
chr1:224043332-224044231	chr1	+	224043685	224044229	True	NM_005426,NM_001748	chr1,chr1	-,+	TP53BP2,CAPN2	-10011,-143627
chr2:187482153-187482589	chr2	+	187482161	187482621	True	NM_182521,NM_001144999	chr2,chr2	-,+	ZSWIM2,ITGAV	231326,-17287
chr1:147232593-147233075	chr1	+	147232595	147232904	True	NM_005267,NM_181703	chr1,chr1	+,-	GJA8,GJA5	142041,-55
chr19:6109770-6110071	chr19	+	6109820	6109984	True	NM_000635,NM_030924,NM_134433	chr19,chr19,chr19	-,+,-	RFX2,ACSBG2,RFX2	730,25725,730
chr4:3533304-3533698	chr4	+	3533364	3533550	True	NM_002337,NM_173660	chr4,chr4	-,+	LRPAP1,DOK7	724,-68382
chr20:32247760-32248237	chr20	+	32247771	32248213	True	NM_080825,NM_031231,NM_001024675	chr20,chr20,chr20	+,-,+	C20orf144,NECAB3,C20orf134	1878,14101,6090
chr16:85209112-85209423	chr16	+	85209320	85209470	True	NR_033984,NM_198491	chr16,chr16	+,-	LOC400548,FAM92B	-38615,-63206
chr12:106696308-106696508	chr12	+	106696335	106696555	True	NM_006825,NM_152772	chr12,chr12	-,+	CKAP4,TCP11L2	-54622,25
chr14:76044244-76044483	chr14	+	76044262	76044510	True	NM_017791,NM_007176	chr14,chr14	+,-	FLVCR2,C14orf1	429,83078
chr11:60105288-60105776	chr11	+	60105291	60105793	True	NM_022349,NM_139249	chr11,chr11	-,+	MS4A6A,MS4A6E	-154617,-2989
chr18:14336019-14336293	chr18	+	14336023	14336287	True	NR_024076,NR_026756	chr18,chr18	-,+	CXADRP3,LOC284233	162468,1134
chr5:149832099-149833469	chr5	+	149832310	149833497	True	NM_001025071,NM_001025070,NM_005617,NM_001543	chr5,chr5,chr5,chr5	-,-,-,+	RPS14,RPS14,RPS14,NDST1	-2991,-2991,-2991,54176
chr12:7081319-7082213	chr12	+	7081461	7081972	True	NR_029779,NM_007273,NR_029682,NM_001144831,NR_003010,NM_006331	chr12,chr12,chr12,chr12,chr12,chr12	+,-,+,-,-,+	MIR200C,PHB2,MIR141,PHB2,SCARNA12,EMG1	-8658,-1570,-8260,-1545,-4692,-1576
chr19:17449653-17450268	chr19	+	17449766	17450178	True	NM_133644,NM_001195422,NM_001128855,NM_020959,NM_032620	chr19,chr19,chr19,chr19,chr19	+,+,+,-,+	GTPBP3,GTPBP3,GTPBP3,ANO8,GTPBP3	-1491,-4026,-1491,-4128,-1491
chr10:124760815-124761754	chr10	+	124760900	124761595	True	NM_001609,NM_022466	chr10,chr10	+,-	ACADSB,IKZF5	6833,6773
chr17:67238881-67239985	chr17	+	67238911	67239728	True	NM_080282,NM_002758	chr17,chr17	-,+	ABCA10,MAP2K6	1290,171109
chr19:1885895-1886267	chr19	+	1886177	1886276	True	NM_079834,NM_001130111,NM_031213	chr19,chr19,chr19	+,-,-	SCAMP4,FAM108A1,FAM108A1	19096,-659,-659
chr8:101158133-101158554	chr8	+	101158249	101158466	True	NM_001029860,NR_036491,NM_005034	chr8,chr8,chr8	-,-,+	FBXO43,FBXO43,POLR2K	-150,-150,4372
chr17:2238600-2239249	chr17	+	2238620	2239233	True	NR_003072,NR_003073,NM_014853,NM_018128,NM_001098509	chr17,chr17,chr17,chr17,chr17	-,-,+,-,+	SNORD91A,SNORD91B,SGSM2,TSR1,SGSM2	-4956,-6116,1572,1495,1574
chr1:45955316-45956439	chr1	+	45955560	45956277	True	NM_007170,NR_033296,NR_033297,NM_015506,NR_033298	chr1,chr1,chr1,chr1,chr1	-,-,-,+,-	TESK2,CCDC163P,CCDC163P,MMACHC,CCDC163P	614,9525,9525,9578,9525
chr8:37392427-37393670	chr8	+	37392569	37393719	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	159581,211895
chr12:69204400-69205540	chr12	+	69204573	69205379	True	NM_001005502,NM_002392	chr12,chr12	-,+	CPM,MDM2	121661,-2659
chr20:32309901-32310214	chr20	+	32309900	32309983	True	NM_032819,NM_007238,NM_183397	chr20,chr20,chr20	+,-,-	ZNF341,PXMP4,PXMP4	9824,-1764,-1764
chr6:2840747-2841417	chr6	+	2840751	2841417	True	NM_130395,NM_030666	chr6,chr6	+,-	WRNIP1,SERPINB1	-75136,714
chr12:121087380-121087590	chr12	+	121087447	121087587	True	NM_031205,NM_001033677,NM_198202,NM_004276	chr12,chr12,chr12,chr12	+,+,-,+	CABP1,CABP1,POP5,CABP1	783,-9076,-68246,783
chr1:46807770-46808140	chr1	+	46807830	46808106	True	NM_006369,NM_199044	chr1,chr1	-,+	LRRC41,NSUN4	-38792,-1491
chr1:28240744-28241104	chr1	+	28240847	28241103	True	NM_001009568,NM_002946	chr1,chr1	+,-	SMPDL3B,RPA2	20400,183
chr14:31090129-31090533	chr14	+	31090299	31090473	True	NM_016106,NR_030354,NM_182835	chr14,chr14,chr14	+,-,+	SCFD1,MIR624,SCFD1	1047,393525,1047
chrY:23982862-23983208	chrY	+	23982874	23983006	True	NM_001006120,NM_001006118	chrY,chrY	+,-	RBMY1D,RBMY1E	-286120,57677
chr12:7056069-7056552	chr12	+	7056113	7056561	True	NM_138425,NM_080548,NM_080549,NR_003010,NM_002831	chr12,chr12,chr12,chr12,chr12	+,+,+,-,+	C12orf57,PTPN6,PTPN6,SCARNA12,PTPN6	-2961,-424,3872,20258,3872
chr8:133065235-133066484	chr8	+	133065332	133066532	True	NM_001080399,NM_015137	chr8,chr8	-,+	OC90,EFR3A	5145,-149027
chr11:2892755-2893648	chr11	+	2892807	2893552	True	NR_024627,NM_000076	chr11,chr11	+,-	KCNQ1DN,CDKN1C	-1595,13501
chr17:17111919-17113006	chr17	+	17112283	17112503	True	NM_178836,NM_020201	chr17,chr17	-,+	PLD6,NT5M	-2637,94176
chr3:40497274-40497844	chr3	+	40497442	40497834	True	NR_033965,NM_001034996,NM_003973	chr3,chr3,chr3	-,+,+	FLJ33065,RPL14,RPL14	-146253,995,966
chr20:61429353-61429646	chr20	+	61429352	61429676	True	NM_007346,NM_018270,NM_006602	chr20,chr20,chr20	+,+,-	OGFR,C20orf20,TCFL5	6500,-1598,63489
chr5:96337563-96338460	chr5	+	96337918	96338498	True	NM_153234,NM_175920	chr5,chr5	-,+	LIX1,LNPEP	140072,-43820
chr19:37960444-37960678	chr19	+	37960510	37960670	True	NM_144694,NM_152484	chr19,chr19	+,-	ZNF570,ZNF569	-579,-2171
chr12:120104922-120105545	chr12	+	120105029	120105521	True	NR_031589,NM_006253	chr12,chr12	-,+	MIR1178,PRKAB1	46058,239
chr1:151138919-151139437	chr1	+	151138974	151139332	True	NM_024575,NM_001204848,NM_013353,NR_037937,NM_001204856,NM_001136543,NM_024041,NM_212551	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,+,+,-,+,-	TNFAIP8L2,TNFAIP8L2-SCNM1,TMOD4,SCNM1,SCNM1,LYSMD1,SCNM1,LYSMD1	-9920,-9920,9265,-527,-527,-550,-527,-604
chr7:96746627-96746882	chr7	+	96746658	96746924	True	NM_005221,NM_020186	chr7,chr7	-,+	DLX5,ACN9	-92515,-804
chr13:114105977-114106417	chr13	+	114106137	114106435	True	NM_017905,NM_138430,NM_199162	chr13,chr13,chr13	+,-,-	TMCO3,ADPRHL1,ADPRHL1	38872,1454,-2680
chr19:45657383-45657625	chr19	+	45657456	45657608	True	NM_212550,NM_198478	chr19,chr19	+,-	BLOC1S3,NKPD1	24394,5850
chr15:43429891-43430114	chr15	+	43429897	43430155	True	NM_024956,NM_174916	chr15,chr15	+,-	TMEM62,UBR1	-4226,-31611
chr11:124735728-124735950	chr11	+	124735822	124735954	True	NM_022370,NM_019055	chr11,chr11	+,-	ROBO3,ROBO4	-568,31927
chrX:76710000-76710583	chrX	+	76710182	76710262	True	NM_003868,NM_000489	chrX,chrX	+,-	FGF16,ATRX	-589,331507
chr12:6582113-6582794	chr12	+	6582230	6582292	True	NM_014865,NM_014231,NM_016830,NM_199245	chr12,chr12,chr12,chr12	+,-,-,-	NCAPD2,VAMP1,VAMP1,VAMP1	21005,-2387,-2387,-2387
chr22:23879095-23879668	chr22	+	23879245	23879627	True	NM_153615,NM_020070	chr22,chr22	+,-	RGL4,IGLL1	153420,42926
chr1:28997482-28998179	chr1	+	28997491	28997669	True	NM_024482,NM_005644,NM_006582	chr1,chr1,chr1	+,-,+	GMEB1,TAF12,GMEB1	-2302,-27887,-2302
chr7:93519865-93520077	chr7	+	93519873	93520069	True	NM_021955,NM_006528	chr7,chr7	+,-	GNGT1,TFPI2	15750,46
chr11:50376789-50378491	chr11	+	50376798	50378517	True	NR_024504,NR_003034	chr11,chr11	+,-	LOC646813,LOC441601	-8544,-119165
chr5:133987279-133987770	chr5	+	133987435	133987615	True	NM_021982,NM_016103	chr5,chr5	+,-	SEC24A,SAR1B	-3010,-18902
chr2:71125747-71126273	chr2	+	71125787	71126318	True	NM_015717,NM_012476	chr2,chr2	-,+	CD207,VAX2	-62834,1401
chr8:18045351-18045788	chr8	+	18045481	18045831	True	NM_004315,NM_001160179	chr8,chr8	-,+	ASAH1,NAT1	-102974,-17572
chr2:70779377-70779696	chr2	+	70779415	70779733	True	NM_001099691,NM_016297,NM_003236	chr2,chr2,chr2	-,+,-	TGFA,PCYOX1,TGFA	1422,-294242,1422
chr17:7461297-7461608	chr17	+	7461387	7461541	True	NM_172087,NM_003808,NM_003809,NR_037926,NM_172089,NM_172088,NM_006942,NM_001198624,NM_015670,NM_001198623,NM_001198622,NR_037146	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,+,-,+,+,+,+,+	TNFSF13,TNFSF13,TNFSF12,SENP3-EIF4A1,TNFSF12-TNFSF13,TNFSF13,SOX15,TNFSF13,SENP3,TNFSF13,TNFSF13,TNFSF12	67,67,-9063,3767,-9063,67,31997,67,3767,67,67,-9063
chr1:155279069-155279645	chr1	+	155279069	155279393	True	NM_001135822,NM_002004,NM_000298,NM_001135821,NM_181871	chr1,chr1,chr1,chr1,chr1	+,+,-,+,-	FDPS,FDPS,PKLR,FDPS,PKLR	-581,-581,-7844,-415,-8277
chr8:101324957-101326674	chr8	+	101325185	101326614	True	NM_183419,NM_003114,NM_015435	chr8,chr8,chr8	-,+,-	RNF19A,SPAG1,RNF19A	-2858,-154675,-9698
chr1:68150635-68150857	chr1	+	68150762	68150856	True	NM_018841,NM_001924,NM_001199741,NM_001199742	chr1,chr1,chr1,chr1	-,+,+,+	GNG12,GADD45A,GADD45A,GADD45A	148349,3,3,3
chr3:38066014-38066433	chr3	+	38066143	38066303	True	NM_006225,NR_024071,NM_001130964,NM_007335	chr3,chr3,chr3,chr3	-,-,-,+	PLCD1,PLCD1,PLCD1,DLEC1	4901,25,25,14392
chr12:12845378-12846203	chr12	+	12845493	12846233	True	NM_004064,NM_006143	chr12,chr12	+,-	CDKN1B,GPR19	24068,2938
chr19:6110607-6110842	chr19	+	6110689	6110891	True	NM_000635,NM_030924,NM_134433	chr19,chr19,chr19	-,+,-	RFX2,ACSBG2,RFX2	-25,24818,-25
chr19:2255935-2256315	chr19	+	2255952	2256160	True	NR_036207,NM_000479,NM_144616	chr19,chr19,chr19	+,+,-	MIR4321,AMH,JSRP1	-5365,-6890,312
chr8:95229322-95229903	chr8	+	95229340	95229890	True	NM_001161778,NM_004063,NM_001144663	chr8,chr8,chr8	+,-,-	PDP1,CDH17,CDH17	-299399,-8525,35
chr9:73695008-73695765	chr9	+	73695136	73695805	True	NM_015110,NM_001007471	chr9,chr9	+,-	SMC5,TRPM3	-821315,40766
chr15:25468520-25468932	chr15	+	25468563	25468951	True	NR_003358,NR_003495,NR_003496,NR_003497,NR_003346,NR_003344,NR_003345,NR_003351,NR_003347,NM_130838,NR_003342,NR_003343,NR_003303,NR_003348,NR_003349	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,-,+,+,+,+,+	SNORD115-43,SNORD115-24,HBII-52-27,HBII-52-28,SNORD115-31,SNORD115-29,SNORD115-30,SNORD115-36,SNORD115-32,UBE3A,SNORD115-25,SNORD115-26,SNORD115-11,SNORD115-33,SNORD115-34	-221,-9808,-2964,-1113,3304,-221,1398,-221,5162,181752,-7926,-4850,-221,7033,8582
chr17:684453-685052	chr17	+	684469	685065	True	NM_018146,NM_016080	chr17,chr17	+,-	RNMTL1,GLOD4	447,564
chr2:169885036-169885551	chr2	+	169885097	169885523	True	NM_005771,NM_003742	chr2,chr2	+,-	DHRS9,ABCB11	35775,2360
chr17:34398328-34400037	chr17	+	34398350	34399879	True	NM_002988,NM_002983	chr17,chr17	+,-	CCL18,CCL3	-6758,17682
chr1:120927160-120928895	chr1	+	120927555	120928828	True	NM_001004340,NR_027337,NM_001017986	chr1,chr1,chr1	-,+,-	FCGR1B,HIST2H2BA,FCGR1B	7166,-21572,7166
chr1:120927160-120928895	chr1	-	149376460	149377717	False	NR_027484,NM_001024599	chr1,chr1	+,-	FCGR1C,HIST2H2BF	-7217,21562
chr1:120927160-120928895	chr1	-	149761396	149762654	False	NM_001161334,NM_000566	chr1,chr1	-,+	HIST2H2BF,FCGR1A	21324,-7197
chr21:46844642-46844872	chr21	+	46844741	46844919	True	NM_130445,NR_027498,NR_028082	chr21,chr21,chr21	+,-,-	COL18A1,NCRNA00175,NCRNA00175	-19695,116,86
chr6:99281086-99281438	chr6	+	99281096	99281272	True	NM_005604,NM_012160	chr6,chr6	+,-	POU3F2,FBXL4	1307,114627
chr5:56469589-56469982	chr5	+	56469652	56470004	True	NM_001203246,NM_001127235,NM_022913,NM_152622	chr5,chr5,chr5,chr5	+,+,+,-	GPBP1,GPBP1,GPBP1,MIER3	-6,1270,-6,-221698
chr19:3360595-3360966	chr19	+	3360616	3360940	True	NM_005597,NM_001136503,NM_205843	chr19,chr19,chr19	+,-,+	NFIC,C19orf77,NFIC	5632,119650,-1051
chr8:32581058-32581964	chr8	+	32581356	32582002	True	NM_032664,NM_001159996	chr8,chr8	-,+	FUT10,NRG1	748712,-2058
chr1:28972584-28973369	chr1	+	28972803	28972978	True	NR_004407,NM_005644,NM_001135218	chr1,chr1,chr1	+,-,-	RNU11,TAF12,TAF12	2133,-3199,-3199
chr17:17493921-17494239	chr17	+	17493967	17494149	True	NM_007169,NM_030665,NM_148172	chr17,chr17,chr17	-,+,-	PEMT,RAI1,PEMT	-8222,90637,895
chr1:6764209-6765825	chr1	+	6764212	6765095	True	NM_018198,NM_138350	chr1,chr1	-,+	DNAJC11,THAP3	-2246,-79055
chr12:133340224-133341404	chr12	+	133340366	133341419	True	NM_001170544,NM_015114	chr12,chr12	+,-	PGAM5,ANKLE2	-53024,-1915
chr16:16425500-16425818	chr16	+	16425500	16425562	True	NR_036447,NM_001079528	chr16,chr16	+,-	PKD1P1,ABCC6	-14085,-108172
chr16:16425500-16425818	chr16	-	2149919	2150031	False	NR_030646,NM_014353	chr16,chr16	-,+	MIR1225,RAB26	-9634,48619
chrX:55245345-55246147	chrX	+	55245356	55246020	True	NM_001013435,NM_001190708,NM_130467	chrX,chrX,chrX	+,-,+	PAGE5,MTRNR2L10,PAGE5	771,-36412,770
chr9:67933725-67934520	chr9	+	67934404	67934487	True	NR_027422,NM_001012419,NM_032250	chr9,chr9,chr9	-,+,+	FAM27B,ANKRD20A3,ANKRD20A1	-140215,-7704,-7704
chr14:103057011-103057294	chr14	+	103057141	103057245	True	NM_152326,NM_015156	chr14,chr14	-,+	ANKRD9,RCOR1	-81013,1987
chr7:30333152-30334253	chr7	+	30333244	30334103	True	NR_030319,NR_037513,NM_147128	chr7,chr7,chr7	+,-,+	MIR550A1,MIR550B1,ZNRF2	-3893,-3738,-9380
chr3:101234059-101235874	chr3	+	101234196	101235741	True	NM_001077203,NM_020654,NR_036433	chr3,chr3,chr3	-,-,+	SENP7,SENP7,FAM172B	-2111,-2111,1974
chr11:63304612-63304961	chr11	+	63304667	63304988	True	NM_017878,NM_004585	chr11,chr11	-,+	HRASLS2,RARRES3	25918,-445
chr13:114587628-114588603	chr13	+	114587755	114588475	True	NM_000820,NR_024609	chr13,chr13	-,+	GAS6,FLJ44054	-20709,-1196
chr21:46072309-46073191	chr21	+	46072385	46073173	True	NM_198697,NM_198698,NM_198692	chr21,chr21,chr21	+,-,+	KRTAP12-3,KRTAP12-4,KRTAP10-11	4675,1453,-6105
chr2:20253288-20253908	chr2	+	20253630	20253785	True	NM_014713,NR_033875	chr2,chr2	-,+	LAPTM4A,FLJ12334	-1841,-185066
chr6:43859899-43860926	chr6	+	43860147	43860953	True	NR_024478,NM_018135	chr6,chr6	+,-	LOC100132354,MRPS18A	-1433,-204598
chr19:11202365-11202698	chr19	+	11202418	11202714	True	NM_001195802,NM_001195803,NM_001195800,NM_000527,NM_001195798,NM_001195799,NM_182513	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,+,-	LDLR,LDLR,LDLR,LDLR,LDLR,LDLR,SPC24	-2431,-2431,-2431,-2431,-2431,-2431,63820
chr16:75658545-75659369	chr16	+	75658837	75659178	True	NR_036460,NM_012091,NM_018975	chr16,chr16,chr16	-,-,+	ADAT1,ADAT1,TERF2IP	-1616,-1616,22456
chr1:196951549-196952266	chr1	+	196952046	196952308	True	NM_030787,NM_001994	chr1,chr1	+,-	CFHR5,F13B	-5434,84139
chr18:32558396-32558697	chr18	+	32558412	32558746	True	NM_001143827,NM_001143826,NM_001112734	chr18,chr18,chr18	+,+,-	MAPRE2,MAPRE2,ZSCAN30	-255,-1571,311500
chr5:154389192-154389579	chr5	+	154389197	154389535	True	NM_015465,NM_001099293	chr5,chr5	-,+	GEMIN5,KIF4B	-71421,3724
chr11:65191820-65192234	chr11	+	65191873	65192253	True	NR_028272,NM_182556	chr11,chr11	+,-	NEAT1,SLC25A45	-1658,-41731
chr11:110165334-110166413	chr11	+	110165497	110166360	True	NM_002906,NM_004109	chr11,chr11	-,+	RDX,FDX1	1139,134233
chr16:31366140-31366375	chr16	+	31366315	31366381	True	NM_000887,NM_005205	chr16,chr16	+,-	ITGAX,COX6A2	127,73418
chr15:42384927-42385271	chr15	+	42384936	42385292	True	NM_198141,NM_178034	chr15,chr15	+,-	GANC,PLA2G4D	181073,1510
chr12:121836029-121836888	chr12	+	121836302	121836890	True	NM_001137559,NM_194271,NM_025126	chr12,chr12,chr12	-,+,+	ANAPC5,RNF34,RNF34	-44290,1011,1011
chr15:57591056-57592038	chr15	+	57591188	57592023	True	NR_015419,NR_024433	chr15,chr15	-,+	LOC145783,LOC283663	-380491,539
chr2:74643329-74643616	chr2	+	74643376	74643527	True	NM_001145054,NM_032118	chr2,chr2	-,+	C2orf81,WDR54	1374,5357
chr2:100937399-100937628	chr2	+	100937407	100937629	True	NM_198461,NM_001011717	chr2,chr2	-,+	LONRF2,NMS	1616,149314
chr8:74001645-74002672	chr8	+	74001952	74002634	True	NM_153225,NM_017489	chr8,chr8	-,+	C8orf84,TERF1	2923,-80906
chr9:114358895-114360077	chr9	+	114359285	114360105	True	NM_001015882,NM_012212,NM_001146109,NM_001146108	chr9,chr9,chr9,chr9	+,-,-,-	DNAJC25,PTGR1,PTGR1,PTGR1	33526,1656,2080,2080
chr19:53775862-53776432	chr19	+	53775974	53776468	True	NM_001195187,NM_173857	chr19,chr19	+,-	LOC646508,VN1R4	8342,-5056
chr6:34723184-34723388	chr6	+	34723276	34723392	True	NM_024294,NR_029472,NM_003093	chr6,chr6,chr6	-,+,+	C6orf106,SNRPC,SNRPC	-58651,1478,1478
chrX:26763720-26765699	chrX	+	26763750	26765717	True	NR_001559,NR_002784	chrX,chrX	+,-	VENTXP1,SMEK3P	-187356,715793
chr1:28771217-28773144	chr1	+	28771940	28772974	True	NM_023923,NR_003077	chr1,chr1	+,-	PHACTR4,SNORD99	-7335,132417
chr3:96558051-96559564	chr3	+	96558332	96559470	True	NM_001042533,NM_001080448	chr3,chr3	-,+	MINA,EPHA6	1131804,-24958
chr14:55705876-55707365	chr14	+	55705893	55707334	True	NM_017943,NM_014750	chr14,chr14	+,-	FBXO34,DLGAP5	30686,-47497
chr1:155273672-155273943	chr1	+	155273725	155273941	True	NM_001135822,NM_002004,NM_000298,NM_181871,NM_001135821	chr1,chr1,chr1,chr1,chr1	+,+,-,-,+	FDPS,FDPS,PKLR,PKLR,FDPS	4597,4597,-2500,-2933,4763
chr15:78235963-78236651	chr15	+	78236035	78236559	True	NM_001101404,NR_027024	chr15,chr15	+,-	SH2D7,LOC645752	148367,-16847
chr17:40195570-40196354	chr17	+	40195810	40196049	True	NM_017595,NR_029431	chr17,chr17	+,-	NKIRAS2,DNAJC7	-23774,-26095
chr1:59248333-59248839	chr1	+	59248471	59248781	True	NM_002228,NR_034014,NR_034015	chr1,chr1,chr1	-,+,+	JUN,LOC100131060,LOC100131060	1054,2041,2041
chr10:69832918-69833727	chr10	+	69832918	69833593	True	NM_015601,NM_032578,NM_022079	chr10,chr10,chr10	-,+,-	HERC4,MYPN,HERC4	1567,35656,1567
chr16:67359274-67359692	chr16	+	67359450	67359712	True	NM_018296,NM_001100915	chr16,chr16	+,-	LRRC36,KCTD19	1034,999
chr1:161735127-161736159	chr1	+	161735128	161736092	True	NM_007348,NR_002595	chr1,chr1	+,-	ATF6,RPL31P11	-9,-80086
chr2:237990891-237991328	chr2	+	237990969	237991295	True	NM_004369,NM_006710,NM_198189	chr2,chr2,chr2	-,+,+	COL6A3,COPS8,COPS8	331605,2788,2788
chr2:231789543-231789893	chr2	+	231789575	231789901	True	NM_030926,NM_005683	chr2,chr2	+,-	ITM2C,GPR55	-60005,90
chr22:18955997-18956813	chr22	+	18956156	18956366	True	NR_002733,NM_016335	chr22,chr22	+,-	DGCR5,PRODH	1660,-32090
chr5:43485450-43486914	chr5	+	43485652	43486370	True	NM_022483,NM_012343	chr5,chr5	-,+	C5orf28,NNT	-1660,116420
chr20:44036134-44036981	chr20	+	44036139	44036845	True	NM_015937,NM_001184730,NM_001197140,NM_014477,NM_001184729,NM_001184728,NM_001197139,NM_001048226,NM_001048225,NM_001048224,NM_001048223,NM_001048222,NM_001048221,NM_018478	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,+,+,-,+,+,+,+,+,+,+,+,+,+	PIGT,PIGT,DBNDD2,TP53TG5,PIGT,PIGT,DBNDD2,DBNDD2,DBNDD2,DBNDD2,DBNDD2,DBNDD2,DBNDD2,DBNDD2	7861,7861,-1369,-29182,7861,7861,-1557,188,188,-962,-962,-1535,-1535,-1329
chr9:116341544-116342318	chr9	+	116341579	116342343	True	NM_017443,NM_021106	chr9,chr9	-,+	POLE3,RGS3	-168550,596
chr1:28656544-28657560	chr1	+	28656893	28657281	True	NM_014280,NM_017638,NM_001127350	chr1,chr1,chr1	-,+,+	DNAJC8,MED18,MED18	-97351,-1431,-1431
chr2:66662899-66664757	chr2	+	66663102	66664782	True	NM_181784,NM_002398	chr2,chr2	-,+	SPRED2,MEIS1	-1003446,-621
chr5:179237197-179238087	chr5	+	179237922	179237990	True	NM_001142299,NM_001142298,NM_014275,NM_054013,NM_003900	chr5,chr5,chr5,chr5,chr5	+,+,-,-,+	SQSTM1,SQSTM1,MGAT4B,MGAT4B,SQSTM1	-3970,-4585,-3970,-8047,9851
chr18:53256291-53257017	chr18	+	53256341	53257045	True	NM_003199,NM_001083962,NM_004163	chr18,chr18,chr18	-,-,+	TCF4,TCF4,RAB27B	-481,-481,-760560
chr3:58195068-58195708	chr3	+	58195146	58195757	True	NM_020676,NM_004944	chr3,chr3	+,-	ABHD6,DNASE1L3	27501,4691
chr1:201473946-201474762	chr1	+	201474303	201474751	True	NM_001193570,NM_001193571,NM_001193572,NR_026667,NM_004078	chr1,chr1,chr1,chr1,chr1	-,-,-,+,-	CSRP1,CSRP1,CSRP1,RPS10P7,CSRP1	1686,1266,-8602,14280,1686
chr3:197521701-197522855	chr3	+	197521925	197522499	True	NM_001145642,NM_032773	chr3,chr3	-,+	KIAA0226,LRCH3	-45357,-3831
chr11:72507003-72508102	chr11	+	72507966	72508075	True	NM_033388,NM_006645	chr11,chr11	+,-	ATG16L2,STARD10	17375,-3216
chr3:149686301-149687096	chr3	+	149686388	149687126	True	NM_053024,NM_002628,NR_036538	chr3,chr3,chr3	-,-,+	PFN2,PFN2,LOC646903	1665,1665,1939
chr9:74984059-74984496	chr9	+	74984174	74984294	True	NM_138691,NM_001102420,NM_001102421,NM_006007	chr9,chr9,chr9,chr9	+,-,-,-	TMC1,ZFAND5,ZFAND5,ZFAND5	152422,-4011,-4011,-4011
chr20:34330295-34330536	chr20	+	34330297	34330497	True	NM_184234,NM_004902,NM_016436	chr20,chr20,chr20	-,-,+	RBM39,RBM39,PHF20	-104,-104,29425
chr6:14934147-14935377	chr6	+	14934221	14935378	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	311148,727961
chr5:121482744-121484522	chr5	+	121482824	121484193	True	NM_002317,NM_001195535	chr5,chr5	-,+	LOX,LOC728460	-68769,11677
chr9:101894172-101896140	chr9	+	101894507	101895705	True	NM_004612,NM_033087	chr9,chr9	+,-	TGFBR1,ALG2	-27146,88592
chr8:132916730-132916950	chr8	+	132916817	132916955	True	NM_015137,NM_001080399	chr8,chr8	+,-	EFR3A,OC90	-512,154722
chr17:57697546-57698058	chr17	+	57697579	57698066	True	NM_004859,NM_016077	chr17,chr17	+,-	CLTC,PTRH2	-580,86840
chr12:108169077-108169294	chr12	+	108169165	108169291	True	NM_012406,NM_203436	chr12,chr12	-,+	PRDM4,ASCL4	-14251,-1054
chr16:85932611-85932871	chr16	+	85932623	85932787	True	NM_002163,NM_006067	chr16,chr16	+,-	IRF8,COX4NB	-14,-99475
chr5:140480848-140481215	chr5	+	140480903	140481261	True	NM_018936,NM_018937,NM_031947	chr5,chr5,chr5	+,+,-	PCDHB2,PCDHB3,SLC25A2	-6717,-720,202401
chr19:6425818-6426613	chr19	+	6425904	6426632	True	NR_037505,NM_139161,NM_003685,NM_173637	chr19,chr19,chr19,chr19	-,+,-,-	MIR3940,CRB3,KHSRP,SLC25A41	-9382,37627,-1082,7208
chrX:229790-230055	chrY	+	179839	180089	False	NM_018390,NM_012227	chrY,chrY	+,-	PLCXD1,GTPBP6	-31829,848
chrX:229790-230055	chrX	+	229839	230089	True	NM_018390,NM_012227	chrX,chrX	+,-	PLCXD1,GTPBP6	-31829,848
chr6:78530280-78531232	chr6	+	78530363	78531204	True	NM_000863,NM_001010844	chr6,chr6	-,+	HTR1B,IRAK1BP1	-357243,1045984
chr15:45879070-45879308	chr15	+	45879085	45879239	True	NM_012388,NM_013309	chr15,chr15	+,-	PLDN,SLC30A4	177,-64083
chr9:114507936-114508523	chr9	+	114508042	114508569	True	NM_001080551,NM_001198664	chr9,chr9	-,+	C9orf84,GNG10	13301,-84243
chr1:32739954-32740400	chr1	+	32739963	32740399	True	NM_001042771,NR_026850	chr1,chr1	+,-	LCK,MTMR9LP	-302,-32652
chr19:12176105-12176543	chr19	+	12176135	12176385	True	NM_001136501,NM_001080404	chr19,chr19	+,-	ZNF844,ZNF878	-640,-9008
chr19:10529855-10530078	chr19	+	10529855	10530087	True	NM_007065,NM_001111307	chr19,chr19	-,+	CDC37,PDE4A	-15584,1245
chr15:74044087-74044464	chr15	+	74044089	74044373	True	NM_025240,NM_001039614	chr15,chr15	+,-	CD276,C15orf59	-67518,-273
chr1:150601989-150602198	chr1	+	150602127	150602191	True	NM_207168,NM_004436,NM_207045,NM_207046,NM_207047,NM_207042,NM_207043,NM_207044,NR_036211	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,-,-,-,+	ENSA,ENSA,ENSA,ENSA,ENSA,ENSA,ENSA,ENSA,MIR4257	-29,-29,-518,-518,-518,-29,-29,-29,-77773
chr12:107380261-107380636	chr12	+	107380426	107380594	True	NM_025198,NM_001033050,NM_152261	chr12,chr12,chr12	-,-,+	MTERFD3,MTERFD3,C12orf23	385,385,-30941
chr10:93556310-93558099	chr10	+	93557048	93558002	True	NM_025235,NM_152429	chr10,chr10	+,-	TNKS2,FGFBP3	148,111306
chr2:32581541-32581772	chr2	+	32581569	32581731	True	NM_021209,NM_016252	chr2,chr2	-,+	NLRC4,BIRC6	-90757,364
chr10:1066422-1067919	chr10	+	1066427	1067839	True	NM_033261,NR_024628,NR_024629,NR_027708,NR_027709	chr10,chr10,chr10,chr10,chr10	-,+,+,+,+	IDI2,IDI2-AS1,IDI2-AS1,IDI2-AS1,IDI2-AS1	4010,737,737,737,737
chr19:51728295-51728618	chr19	+	51728326	51728652	True	NM_001177608,NM_001772,NM_145232,NM_001082618,NM_001163922	chr19,chr19,chr19,chr19,chr19	+,+,-,+,-	CD33,CD33,CTU1,CD33,VSIG10L	-42,-42,-116679,-42,116776
chr19:51728295-51728618	chr19	+	51714504	51714554	False	NM_001177608,NM_145232	chr19,chr19	+,-	CD33,CTU1	13780,-102857
chr2:187694963-187696925	chr2	+	187695268	187696043	True	NM_182521,NM_177454	chr2,chr2	-,+	ZSWIM2,FAM171B	17904,-136535
chr18:24128165-24128591	chr18	+	24128497	24128639	True	NM_001136205,NR_026908,NM_001142730	chr18,chr18,chr18	-,+,-	KCTD1,C18orf16,KCTD1	810,316632,3
chr1:151692822-151693602	chr1	+	151692936	151693616	True	NM_001144956,NM_001172649,NM_007185,NM_001172648	chr1,chr1,chr1,chr1	+,-,-,-	RIIAD1,CELF3,CELF3,CELF3	396,-4054,-3646,-4144
chr5:71415627-71416342	chr5	+	71415719	71416244	True	NM_005909,NM_015084	chr5,chr5	+,-	MAP1B,MRPS27	-12661,199896
chr5:892268-892473	chr5	+	892297	892475	True	NR_027633,NM_001009877,NM_004237,NM_001166260,NM_023924	chr5,chr5,chr5,chr5,chr5	-,-,+,+,-	BRD9,BRD9,TRIP13,TRIP13,BRD9	514,249,493,493,514
chr11:64849239-64850227	chr11	+	64849417	64850274	True	NM_006782,NM_080668	chr11,chr11	+,-	ZFPL1,CDCA5	1419,1392
chr3:45066170-45066578	chr3	+	45066213	45066599	True	NM_003278,NM_016598	chr3,chr3	+,-	CLEC3B,ZDHHC3	1159,-48539
chr15:21005583-21005816	chr15	+	21005628	21005856	True	NR_027992,NR_027411	chr15,chr15	-,+	BCL8,GOLGA8C	-44148,-238005
chr15:21005583-21005816	chr15	+	22012311	22012539	False	NR_015416,NR_024387	chr15,chr15	+,-	LOC727924,CXADRP2	265492,4389
chr3:25810706-25811732	chr3	+	25811049	25811412	True	NM_001145391,NM_001145293	chr3,chr3	+,-	OXSM,NGLY1	20150,13633
chr17:61600955-61601374	chr17	+	61601011	61601347	True	NM_001915,NM_173092,NM_030779	chr17,chr17,chr17	-,+,+	CYB561,KCNH6,KCNH6	-77289,-367,-367
chr9:35564713-35566364	chr9	+	35565066	35566386	True	NM_001099951,NM_001135999,NM_001164310	chr9,chr9,chr9	-,+,-	FAM166B,RUSC2,FAM166B	-1170,-26488,-1170
chr6:291695-291901	chr6	+	291825	291901	True	NM_020185,NM_148959	chr6,chr6	+,-	DUSP22,HUS1B	199,365113
chr2:135208180-135208822	chr2	+	135208397	135208777	True	NM_030923,NR_024275	chr2,chr2	-,+	TMEM163,LOC151162	267844,-1488
chr15:83208362-83208608	chr15	+	83208465	83208647	True	NM_001199057,NR_033579,NM_001021	chr15,chr15,chr15	-,+,-	LOC100505503,LOC440297,RPS17	611,-78485,611
chr15:83208362-83208608	chr15	+	82824122	82824304	False	NM_001199057,NR_033579,NM_001021	chr15,chr15,chr15	-,+,-	LOC100505503,LOC440297,RPS17	611,-70728,611
chr7:100882706-100883123	chr7	+	100883024	100883142	True	NM_014343,NM_006349,NM_016068,NM_001185080	chr7,chr7,chr7,chr7	-,+,-,-	CLDN15,ZNHIT1,FIS1,CLDN15	-1797,-22090,5279,-923
chr2:23687159-23688351	chr2	+	23687436	23688400	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	461584,-79190
chr16:25229920-25231212	chr16	+	25230232	25230879	True	NM_001012981,NM_001169	chr16,chr16	-,+	ZKSCAN2,AQP8	38027,-1999
chr5:55142547-55142993	chr5	+	55142657	55142731	True	NM_139017,NM_173514	chr5,chr5	+,-	IL31RA,SLC38A9	4602,-134494
chr21:46423225-46423884	chr21	+	46423264	46423704	True	NR_033840,NR_024089,NM_058190	chr21,chr21,chr21	-,-,+	NCRNA00163,NCRNA00162,C21orf70	-9263,988,-63360
chr17:73105042-73105335	chr17	+	73105076	73105264	True	NM_014595,NM_024585	chr17,chr17	-,+	NT5C,ARMC7	22663,817
chr9:113801268-113801739	chr9	+	113801282	113801780	True	NM_057159,NM_001401,NM_005592	chr9,chr9,chr9	-,-,+	LPAR1,LPAR1,MUSK	-917,-917,-370282
chr13:37633194-37633434	chr13	+	37633204	37633472	True	NM_017569,NM_001014286,NM_181503	chr13,chr13,chr13	-,-,+	FAM48A,FAM48A,EXOSC8	428,428,-58588
chr20:46414766-46415085	chr20	+	46414787	46415035	True	NM_018837,NM_198596,NM_181659,NM_001161841	chr20,chr20,chr20,chr20	-,-,+,-	SULF2,SULF2,NCOA3,SULF2	21,375,-284237,375
chr19:10710783-10711944	chr19	+	10711099	10711378	True	NM_001145056,NM_005498	chr19,chr19	+,-	SLC44A2,AP1M2	1742,-13108
chrX:49683070-49685065	chrX	+	49683132	49684511	True	NM_001127898,NM_001127899,NR_026742	chrX,chrX,chrX	+,+,-	CLCN5,CLCN5,LOC158572	2713,2713,-39173
chr9:139695061-139695872	chr9	+	139695141	139695862	True	NR_024580,NM_001039374,NM_001173989,NM_001173988,NM_024718,NM_032928	chr9,chr9,chr9,chr9,chr9,chr9	-,+,+,+,+,+	LOC100131193,KIAA1984,C9orf86,C9orf86,C9orf86,TMEM141	7495,-4408,6511,6511,6511,-9421
chr11:64762411-64762721	chr11	+	64762661	64762769	True	NM_001199745,NM_138456	chr11,chr11	+,-	ARL2,BATF2	18815,1798
chr9:22005437-22005830	chr9	+	22005494	22005858	True	NR_003529,NM_004936,NM_078487	chr9,chr9,chr9	+,-,-	CDKN2B-AS1,CDKN2B,CDKN2B	-10755,3504,3504
chrX:19897974-19899022	chrX	+	19898266	19898722	True	NM_031892,NM_001173456	chrX,chrX	-,+	SH3KBP1,PDHA1	7072,-536306
chr13:80913346-80913598	chr13	+	80913387	80913647	True	NM_019080,NM_005842	chr13,chr13	+,-	NDFIP2,SPRY2	-858179,1489
chr12:122244254-122244560	chr12	+	122244377	122244467	True	NM_015048,NR_002809	chr12,chr12	+,-	SETD1B,LOC338799	-1790,-2987
chr19:39442794-39443801	chr19	+	39442898	39443580	True	NM_148169,NM_033363	chr19,chr19	-,+	FBXO17,MRPS12	27,-21355
chr7:136555131-136555615	chr7	+	136555198	136555548	True	NM_001006632,NM_001006630,NM_001006627,NM_001006631,NM_001006629,NM_001006628,NM_001006626,NM_000739,NM_002825	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,+,+,+,+,-	CHRM2,CHRM2,CHRM2,CHRM2,CHRM2,CHRM2,CHRM2,CHRM2,PTN	-1417,-1850,-1850,-1417,-1265,-1256,-1380,-1417,473048
chr19:58095697-58097167	chr19	+	58095795	58097022	True	NM_001010879,NM_017879	chr19,chr19	+,-	ZIK1,ZNF416	-218,-5552
chr12:7864234-7864804	chr12	+	7864236	7864452	True	NM_199286,NM_020634	chr12,chr12	+,-	DPPA3,GDF3	-198,-15876
chr4:8176864-8177163	chr4	+	8176952	8177139	True	NM_001130088,NM_018986	chr4,chr4	-,+	ABLIM2,SH3TC1	-16393,23920
chr5:752379-752814	chr5	+	752426	752756	True	NM_018140,NM_001166260,NM_007030	chr5,chr5,chr5	+,+,-	CEP72,TRIP13,TPPP	-140072,140212,-58916
chr2:27346763-27347132	chr2	+	27346874	27347172	True	NM_032604,NM_001166240,NM_006569,NM_001166239	chr2,chr2,chr2,chr2	+,-,-,-	ABHD1,CGREF1,CGREF1,CGREF1	-268,-4879,-4879,-5101
chr1:1625587-1625872	chr1	+	1625775	1625837	True	NR_002946,NM_001110781	chr1,chr1	+,-	MMP23A,SLC35E2B	5540,-1532
chr14:105191307-105191527	chr14	+	105191373	105191451	True	NM_199165,NM_005163,NM_152328	chr14,chr14,chr14	+,-,+	ADSSL1,AKT1,ADSSL1	4776,68537,-890
chr19:33070874-33071468	chr19	+	33070896	33071348	True	NM_004708,NM_032139	chr19,chr19	+,-	PDCD5,ANKRD27	745,94804
chr7:150756822-150757045	chr7	+	150756822	150757049	True	NM_001164410,NM_001199693,NM_001199692,NM_003040,NM_004935,NM_001199694	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,-,+	CDK5,SLC4A2,SLC4A2,SLC4A2,CDK5,SLC4A2	-1770,2584,-1574,-216,-1770,2689
chr9:128474114-128474896	chr9	+	128474116	128474500	True	NM_001006621,NM_001006619,NM_024117,NM_001006620,NM_006195,NM_001006617,NM_001006618	chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,-,-,-,+,-,-	MAPKAP1,MAPKAP1,MAPKAP1,MAPKAP1,PBX3,MAPKAP1,MAPKAP1	-4603,-4603,-4603,-4603,35116,-4603,-4603
chr3:128364941-128365546	chr3	+	128365180	128365259	True	NM_004637,NM_002950	chr3,chr3	+,-	RAB7A,RPN1	79719,4515
chr10:698642-699359	chr10	+	698653	699119	True	NR_027152,NR_027151,NM_014974	chr10,chr10,chr10	+,+,-	C10orf108,C10orf108,DIP2C	-2688,-2817,36539
chr2:27440511-27440714	chr2	+	27440511	27440763	True	NM_021095,NM_001170795,NM_004341,NR_028323,NM_016085,NM_080592	chr2,chr2,chr2,chr2,chr2,chr2	-,+,+,-,+,+	SLC5A6,C2orf28,CAD,SLC5A6,C2orf28,C2orf28	-5336,-5343,-304,-5336,-5343,-5663
chrX:50557147-50557434	chrX	+	50557159	50557407	True	NM_020717,NR_027121,NR_003933	chrX,chrX,chrX	-,-,+	SHROOM4,SHROOM4,LOC347376	-115,-115,91024
chr18:13621344-13621568	chr18	+	13621418	13621594	True	NM_001003675,NM_001003674,NM_001098801,NM_181483,NM_004338	chr18,chr18,chr18,chr18,chr18	+,+,-,+,+	C18orf1,C18orf1,C18orf19,C18orf1,C18orf1	-9804,-9804,105047,-602,-602
chr20:35723628-35724148	chr20	+	35723713	35724033	True	NM_002895,NM_183404,NM_001135771	chr20,chr20,chr20	-,-,+	RBL1,RBL1,RPN2	427,427,83422
chr7:150076662-150078330	chr7	+	150077111	150078351	True	NM_173680,NM_002889,NM_014374	chr7,chr7,chr7	+,-,+	ZNF775,RARRES2,REPIN1	-756,-38348,-8904
chr11:124310917-124311291	chr11	+	124310920	124311254	True	NM_012378,NM_001005194	chr11,chr11	-,+	OR8B8,OR8A1	39,128710
chr7:65018031-65019179	chr7	+	65018074	65019071	True	NM_000181,NR_027392	chr7,chr7	-,+	GUSB,INTS4L2	428280,93705
chr7:65018031-65019179	chr7	-	64602200	64603195	False	NR_027393,NM_001007253	chr7,chr7	+,-	INTS4L1,ERV3	-648,-135076
chr7:65018031-65019179	chr7	-	65113379	65114374	False	NM_000181,NR_027392	chr7,chr7	-,+	GUSB,INTS4L2	332977,-653
chr7:65018031-65019179	chr7	+	64972280	64973276	False	NM_152626,NM_000181	chr7,chr7	+,-	ZNF92,GUSB	-133563,474075
chr14:50582162-50582455	chr14	+	50582215	50582413	True	NM_024558,NM_001040662,NM_015684	chr14,chr14,chr14	-,-,+	METTL21D,METTL21D,ATP5S	934,934,196633
chr6:74367618-74368105	chr6	+	74367724	74367798	True	NM_001159587,NM_012434	chr6,chr6	+,-	CD109,SLC17A5	37709,-3987
chr12:132380049-132380400	chr12	+	132380133	132380383	True	NM_175066,NM_003565	chr12,chr12	-,+	DDX51,ULK1	248547,-905
chr20:48100148-48100521	chr20	+	48100187	48100425	True	NM_004975,NR_003030	chr20,chr20	-,+	KCNB1,SNORD12	-1006,-203018
chr9:139641308-139641792	chr9	+	139641466	139641660	True	NR_033913,NM_198946,NM_001001712	chr9,chr9,chr9	+,-,-	LOC100128593,LCN6,LCN10	-910,1370,-4055
chr4:17810574-17811977	chr4	+	17810701	17811918	True	NM_017741,NM_022346	chr4,chr4	-,+	DCAF16,NCAPG	514,606
chr1:31655500-31656855	chr1	+	31655529	31656852	True	NM_024522,NM_016505	chr1,chr1	-,+	NKAIN1,ZCCHC17	55932,112989
chr12:16506126-16506784	chr12	+	16506295	16506584	True	NM_145792,NM_145791,NM_001170798,NM_020300,NM_145764	chr12,chr12,chr12,chr12,chr12	+,+,-,+,+	MGST1,MGST1,SLC15A5,MGST1,MGST1	-6270,-5634,-75676,-5767,5
chr12:120876808-120877110	chr12	+	120876861	120877060	True	NM_016399,NM_004373,NM_176818,NR_033684	chr12,chr12,chr12,chr12	-,+,+,+	TRIAP1,COX6A1,GATC,GATC	7206,-1009,7180,7180
chr12:56613768-56614158	chr12	+	56613837	56613918	True	NM_173596,NM_005785,NM_194359,NM_194358,NM_024068	chr12,chr12,chr12,chr12,chr12	+,-,-,-,+	SLC39A5,RNF41,RNF41,RNF41,OBFC2B	9901,1845,1876,1845,4206
chr7:1652993-1654135	chr7	+	1653074	1654140	True	NM_001134340,NR_001288	chr7,chr7	-,+	PSMG3,TFAMP1	-43406,-35
chrX:152951959-152952324	chrX	+	152951998	152952372	True	NM_001039582,NM_001142806,NM_005629,NM_001142805	chrX,chrX,chrX,chrX	-,+,+,+	PNCK,SLC6A8,SLC6A8,SLC6A8	-12182,2593,1379,1379
chr2:157189185-157189594	chr2	+	157189216	157189633	True	NM_001083112,NM_006186	chr2,chr2	+,-	GPD2,NR4A2	102331,-51
chrX:134556048-134556296	chrX	+	134556104	134556296	True	NR_024359,NM_007131	chrX,chrX	+,-	NCRNA00086,ZNF75D	-287,-126139
chr2:227664221-227664450	chr2	+	227664303	227664443	True	NM_001167608,NM_005544	chr2,chr2	+,-	RHBDD1,IRS1	36227,-797
chr19:35993112-35993460	chr19	+	35993209	35993304	True	NM_014364,NR_033746,NM_001035516,NM_001126059	chr19,chr19,chr19,chr19	+,-,-,-	GAPDHS,DMKN,DMKN,DMKN	31009,8173,-396,8152
chr22:41216510-41217004	chr22	+	41216520	41216812	True	NM_001204827,NM_006358	chr22,chr22	+,-	XPNPEP3,SLC25A17	36272,-1128
chr3:102186219-102187861	chr3	+	102186375	102187804	True	NM_000986,NM_175056	chr3,chr3	-,+	RPL24,ZPLD1	-780812,-32573
chr11:10326547-10327048	chr11	+	10326628	10327008	True	NM_030962,NM_001124	chr11,chr11	-,+	SBF2,ADM	-10874,-37
chr19:39832368-39832747	chr19	+	39832374	39832534	True	NM_018028,NM_004877	chr19,chr19	+,-	SAMD4B,GMFG	573,-5648
chr2:27660969-27662074	chr2	+	27661258	27662059	True	NM_177983,NM_013392,NM_173853,NM_001168364	chr2,chr2,chr2,chr2	-,+,+,+	PPM1G,NRBP1,KRTCAP3,KRTCAP3	-28762,-9838,3173,3173
chr1:47487582-47488254	chr1	+	47487640	47487904	True	NM_000778,NM_178033	chr1,chr1	-,+	CYP4A11,CYP4X1	-80484,1335
chr3:105084622-105084930	chr3	+	105084675	105084945	True	NM_170662,NM_001627	chr3,chr3	-,+	CBLB,ALCAM	502992,767
chr1:19611625-19612719	chr1	+	19611681	19611856	True	NM_012067,NM_001040125	chr1,chr1	-,+	AKR7A3,PQLC2	3475,26883
chr9:44020270-44021507	chr9	+	44020617	44021473	True	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	-389887,-335783
chr9:44020270-44021507	chr9	+	66368054	66368910	False	NR_024443,NR_024496	chr9,chr9	-,+	LOC100133920,LOC442421	662122,125358
chr1:185726265-185727430	chr1	+	185726518	185727470	True	NM_006469,NM_031935	chr1,chr1	-,+	IVNS1ABP,HMCN1	-440057,-22893
chr8:22293512-22294327	chr8	+	22293651	22294363	True	NM_005605,NR_029714	chr8,chr8	+,-	PPP3CC,MIR320A	4232,-191095
chr11:119292116-119292319	chr11	+	119292211	119292287	True	NM_006288,NR_034160	chr11,chr11	-,+	THY1,LOC100499227	2021,-39775
chr1:228331675-228332500	chr1	+	228331677	228332469	True	NM_000858,NM_020435,NM_181465,NM_001159390,NM_001159391	chr1,chr1,chr1,chr1,chr1	+,+,-,+,+	GUK1,GJC2,MRPL55,GUK1,GUK1	-3799,5083,-34664,-3799,-66
chr19:52431518-52432030	chr19	+	52431520	52431845	True	NM_024840,NM_001031721,NM_023074	chr19,chr19,chr19	+,+,-	ZNF613,ZNF613,ZNF649	-883,-883,-23215
chr2:233350301-233350533	chr2	+	233350327	233350441	True	NM_001631,NM_004826	chr2,chr2	+,-	ALPI,ECEL1	-29545,2141
chr2:21267806-21268122	chr2	+	21267851	21268169	True	NM_182828,NM_000384	chr2,chr2	+,-	GDF7,APOB	-401478,-906
chr19:36038085-36038744	chr19	+	36038099	36038629	True	NM_032635,NM_000704	chr19,chr19	+,-	TMEM147,ATP4A	-1605,15981
chr3:141058684-141059459	chr3	+	141058704	141059301	True	NM_001178140,NM_001080412	chr3,chr3	-,+	TFDP2,ZBTB38	659985,-15707
chr1:231116240-231117558	chr1	+	231116639	231117595	True	NM_001122835,NM_022786,NM_024525	chr1,chr1,chr1	-,+,-	TTC13,ARV1,TTC13	-2021,-1868,-2021
chr22:38451463-38452313	chr22	+	38451577	38452335	True	NM_013356,NM_001039584,NM_012407,NM_001039583	chr22,chr22,chr22,chr22	-,+,+,+	SLC16A8,PICK1,PICK1,PICK1	26885,926,926,926
chr12:110338689-110338919	chr12	+	110338695	110338915	True	NM_032300,NM_016433,NM_001143852	chr12,chr12,chr12	+,-,+	TCHP,GLTP,TCHP	-423,-20402,-667
chr1:1710409-1710616	chr1	+	1710410	1710608	True	NM_001198993,NR_002946,NM_001198994,NM_023018	chr1,chr1,chr1,chr1	-,+,-,-	NADK,MMP23A,NADK,NADK	-113,-79083,950,-501
chr11:27384362-27384691	chr11	+	27384391	27384715	True	NR_002832,NM_080654,NM_030771	chr11,chr11,chr11	+,-,-	BDNF-AS1,CCDC34,CCDC34	143683,130,130
chr3:179753763-179754199	chr3	+	179753830	179754237	True	NM_003940,NM_016559	chr3,chr3	+,-	USP13,PEX5L	-382949,330
chrX:129038318-129038840	chrX	+	129038684	129038793	True	NM_001166221,NM_006649,NM_016032	chrX,chrX,chrX	+,+,-	UTP14A,UTP14A,ZDHHC9	1303,1303,-60774
chr12:53693953-53694193	chr12	+	53694006	53694210	True	NM_021640,NM_002624,NM_001173466,NM_145897	chr12,chr12,chr12,chr12	+,+,-,+	C12orf10,PFDN5,AAAS,PFDN5	-587,-4822,21252,-4822
chr19:11497688-11498606	chr19	+	11497846	11498253	True	NM_000121,NM_175871,NR_033663	chr19,chr19,chr19	-,+,-	EPOR,C19orf39,EPOR	-2828,-12514,-2828
chr21:42689214-42690033	chr21	+	42689372	42690041	True	NM_058186,NM_206964,NM_182832	chr21,chr21,chr21	+,+,-	FAM3B,FAM3B,PLAC4	-762,-762,-132206
chr12:98987983-98989876	chr12	+	98988204	98989544	True	NM_005888,NR_003015,NM_002635,NM_213611,NM_201612	chr12,chr12,chr12,chr12,chr12	+,+,+,+,-	SLC25A3,SNORA53,SLC25A3,SLC25A3,IKBIP	-852,3868,-852,-852,49098
chr14:62300101-62301246	chr14	+	62300452	62300844	True	NM_001017970,NM_003082	chr14,chr14	-,+	TMEM30B,SNAPC1	-551922,-71428
chr1:2564276-2564582	chr1	+	2564277	2564523	True	NM_033467,NM_152371	chr1,chr1	-,+	MMEL1,C1orf93	8,-46139
chr9:65593195-65595115	chr9	+	65593326	65595127	True	NR_024496,NM_015667	chr9,chr9	+,-	LOC442421,FAM75A7	899141,-83716
chr9:65593195-65595115	chr9	+	43851755	43853556	False	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	-221025,-166921
chr9:65593195-65595115	chr9	-	39140953	39141016	False	NM_033655,NM_001085452	chr9,chr9	-,+	CNTNAP3,FAM75A1	147347,214682
chr9:65593195-65595115	chr9	-	41416097	41417033	False	NM_015667	chr9	+	FAM75A7	83645
chr2:175281998-175282212	chr2	+	175282027	175282103	True	NM_024583,NM_004882	chr2,chr2	+,-	SCRN3,CIR1	-21629,-21584
chr2:229463645-229463990	chr2	+	229463798	229464010	True	NM_178821,NM_030623	chr2,chr2	+,-	WDR69,SPHKAP	-727532,-417437
chr10:38145304-38145923	chr10	+	38145321	38145926	True	NM_021045,NM_006954	chr10,chr10	-,+	ZNF248,ZNF33A	611,153651
chr5:133449404-133449623	chr5	+	133449413	133449659	True	NM_001134851,NR_033449,NM_003202,NM_213648,NM_006930,NM_201632,NM_201634	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,-,+,+	TCF7,TCF7,TCF7,TCF7,SKP1,TCF7,TCF7	1638,1690,742,1638,63115,1638,1638
chr13:33774590-33774878	chr13	+	33774589	33774881	True	NM_004795,NM_052851	chr13,chr13	+,-	KL,STARD13	-184072,5356
chr19:47292951-47293500	chr19	+	47293287	47293388	True	NM_001145144,NM_001145145,NM_005628,NM_024301	chr19,chr19,chr19,chr19	-,-,-,+	SLC1A5,SLC1A5,SLC1A5,FKRP	-2742,-5153,-1445,-44044
chr17:61952546-61953174	chr17	+	61952686	61952755	True	NM_020991,NM_022645,NM_022644,NM_022557,NM_022556,NR_002947,NM_002059,NM_022558	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,+,-,-	CSH2,CSH2,CSH2,GH2,GH2,TCAM1P,GH2,GH2	-1597,-1597,-1597,6525,6525,-18361,6525,6525
chr17:61952546-61953174	chr17	+	61975364	61975433	False	NM_022641,NM_022640,NR_002947,NM_001317	chr17,chr17,chr17,chr17	-,-,+,-	CSH1,CSH1,TCAM1P,CSH1	-1343,-1343,-41039,-1343
chr14:24658218-24658650	chr14	+	24658237	24658665	True	NM_024658,NM_006405,NM_001014842,NM_001184739	chr14,chr14,chr14,chr14	-,-,-,+	IPO4,TM9SF1,TM9SF1,TSSK4	-113,6274,6274,16260
chr3:16215313-16216178	chr3	+	16215317	16216225	True	NM_001047434,NM_054110	chr3,chr3	-,+	DPH3,GALNTL2	90321,-42
chr8:53620931-53621689	chr8	+	53621104	53621394	True	NM_014781,NM_001083617,NM_005285	chr8,chr8,chr8	-,-,+	RB1CC1,RB1CC1,NPBWR1	5682,5682,231073
chr16:81529071-81530505	chr16	+	81529117	81530410	True	NM_001076780,NM_030629	chr16,chr16	-,+	PKD1L2,CMIP	-275142,-214
chr12:133531235-133532239	chr12	+	133531409	133532198	True	NM_183238,NM_019591,NM_001164715	chr12,chr12,chr12	-,+,-	ZNF605,ZNF26,ZNF605	720,30857,744
chr1:57420214-57421755	chr1	+	57420299	57421803	True	NM_000562,NM_000066	chr1,chr1	+,-	C8A,C8B	-99907,9945
chr2:85328576-85329183	chr2	+	85328825	85329067	True	NM_001080824,NM_031283	chr2,chr2	-,+	C2orf89,TCF7L1	-220573,31515
chr17:72966987-72967509	chr17	+	72967022	72967514	True	NM_014603,NM_030630	chr17,chr17	+,-	CDR2L,C17orf28	16212,1436
chr7:153581783-153583496	chr7	+	153582259	153583305	True	NM_005431,NM_001039350	chr7,chr7	-,+	XRCC2,DPP6	-1209009,1113
chr7:18552841-18554461	chr7	+	18552865	18553671	True	NM_001204148,NM_175886,NM_001204147	chr7,chr7,chr7	+,-,+	HDAC9,PRPS1L1,HDAC9	-4020,-485379,-4020
chr7:75505182-75506254	chr7	+	75505312	75506018	True	NM_001040456,NM_001040457,NM_002991	chr7,chr7,chr7	+,+,-	RHBDD2,RHBDD2,CCL24	2298,2298,-62279
chr7:102116793-102117173	chr7	+	102117101	102117179	True	NM_006234,NM_152892	chr7,chr7	-,+	POLR2J,LRWD1	2252,-11765
chr7:102116793-102117173	chr7	+	44056507	44056585	False	NM_175064,NR_003655	chr7,chr7	+,-	SPDYE1,POLR2J4	-16072,2213
chr7:102116793-102117173	chr7	+	102210757	102210835	False	NM_001166339,NM_001097615	chr7,chr7	+,-	SPDYE2L,POLR2J3	-19132,2283
chr7:102116793-102117173	chr7	+	102309837	102309915	False	NM_032959,NM_001166339	chr7,chr7	-,+	POLR2J2,SPDYE2L	2317,-19119
chr6:35463906-35464118	chr6	+	35463909	35464055	True	NM_007104,NM_003214	chr6,chr6	+,-	RPL10A,TEAD3	-27782,856
chr17:42298868-42299124	chr17	+	42298879	42299131	True	NM_001076683,NM_001076684,NM_177441,NM_014233	chr17,chr17,chr17,chr17	-,-,+,-	UBTF,UBTF,TMUB2,UBTF	-629,-1955,-34356,-3215
chr19:35980000-35980591	chr19	+	35980000	35980622	True	NM_005306,NM_207392	chr19,chr19	+,-	FFAR2,KRTDAP	-39434,784
chr12:9245161-9246376	chr12	+	9245188	9246376	True	NM_000014,NR_026971	chr12,chr12	-,+	A2M,LOC144571	22232,-27469
chr11:64083271-64084406	chr11	+	64083301	64084312	True	NM_181652,NM_012094,NM_016404,NM_181651	chr11,chr11,chr11,chr11	+,+,-,+	PRDX5,PRDX5,TRMT112,PRDX5	1256,1256,779,1256
chr10:103874106-103874310	chr10	+	103874246	103874346	True	NM_001113407,NM_015062,NM_003893	chr10,chr10,chr10	-,+,-	LDB1,PPRC1,LDB1	5914,18440,427
chr6:56407912-56409683	chr6	+	56407988	56409702	True	NM_152731,NM_015548	chr6,chr6	+,-	BEND6,DST	410070,98049
chr2:108902276-108902716	chr2	+	108902339	108902731	True	NM_001056,NM_176825,NR_024439	chr2,chr2,chr2	+,+,-	SULT1C2,SULT1C2,LOC729121	2363,2363,-459756
chr20:30063048-30063312	chr20	+	30063088	30063340	True	NM_001037500,NM_014012	chr20,chr20	-,+	DEFB124,REM1	-2272,-34
chr1:150554623-150555826	chr1	+	150554843	150555623	True	NM_182763,NM_021960,NM_001197320,NR_036211	chr1,chr1,chr1,chr1	-,-,-,+	MCL1,MCL1,MCL1,MIR4257	-2629,-2629,-2629,-30494
chrY:14502189-14503761	chrY	+	14502307	14503718	True	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	270579,29722
chr3:42848363-42848689	chr3	+	42848498	42848740	True	NM_001296,NM_001099669,NM_001099668,NM_014056	chr3,chr3,chr3,chr3	+,-,-,-	CCBP2,HIGD1A,HIGD1A,HIGD1A	2223,-2471,-2564,-2471
chr17:1081292-1081780	chr17	+	1081303	1081593	True	NM_001164405,NM_021962,NM_001159746	chr17,chr17,chr17	+,-,-	BHLHA9,ABR,ABR	92264,1588,9073
chr3:111579578-111580982	chr3	+	111579625	111580757	True	NM_024508,NM_145753,NM_001134438,NM_001134439	chr3,chr3,chr3,chr3	-,+,+,+	ZBED2,PHLDB2,PHLDB2,PHLDB2	-265459,-1649,-1649,-1108
chrX:99171430-99172848	chrX	+	99171562	99172671	True	NM_022144,NR_024608	chrX,chrX	+,-	TNMD,LOC442459	667118,22231
chr12:91541719-91541941	chr12	+	91541734	91541851	True	NM_133504,NR_027932	chr12,chr12	-,+	DCN,CLLU1	30537,1273455
chr17:19294258-19295548	chr17	+	19294282	19295579	True	NM_001198695,NM_002404,NM_139034	chr17,chr17,chr17	-,-,+	MFAP4,MFAP4,MAPK7	-3750,-3750,-12559
chr18:47793558-47794510	chr18	+	47793593	47794431	True	NM_145020,NM_001039535	chr18,chr18	-,+	CCDC11,SKA1	-728,106960
chr10:43904724-43905064	chr10	+	43904921	43904983	True	NM_001098206,NR_026693,NM_001098204,NM_001098205,NM_004966	chr10,chr10,chr10,chr10,chr10	-,+,-,-,-	HNRNPF,ZNF487P,HNRNPF,HNRNPF,HNRNPF	-1622,27590,-225,-589,-265
chr1:205411008-205411288	chr1	+	205411087	205411257	True	NM_002596,NR_029893	chr1,chr1	+,-	CDK18,MIR135B	62426,6319
chr7:11029533-11029780	chr7	+	11029614	11029831	True	NM_002489,NR_033436	chr7,chr7	-,+	NDUFA4,PHF14	-49801,-16174
chr14:21940128-21941838	chr14	+	21940128	21941652	True	NM_001163380,NM_032846,NM_014828,NR_028074	chr14,chr14,chr14,chr14	-,-,+,-	RAB2B,RAB2B,TOX4,RAB2B	3240,3540,3682,3540
chr4:39406568-39406948	chr4	+	39406697	39406770	True	NM_002913,NM_175737	chr4,chr4	-,+	RFC1,KLB	-38696,1702
chr4:113067290-113068536	chr4	+	113067403	113068571	True	NM_152400,NM_052864	chr4,chr4	+,-	C4orf32,TIFA	-904,138548
chr3:49058866-49059103	chr3	+	49058876	49059082	True	NM_001009996,NM_199074,NM_199073,NR_029948,NM_199070,NM_000884,NR_029690,NM_018114,NM_199069	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,+,-,+,-,-,-,+	DALRD3,NDUFAF3,NDUFAF3,MIR425,NDUFAF3,IMPDH2,MIR191,DALRD3,NDUFAF3	-2859,-1019,-309,-1209,-9,7843,-734,-409,-9
chr16:66586702-66586961	chr16	+	66586756	66586832	True	NM_001204098,NM_001204099,NM_001172645,NM_016951,NM_001172643,NM_001202509,NM_001040138,NM_001172644,NM_004614,NM_181641,NM_181640,NM_016326	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,-,+,-,+,+,-,-,+,+,+	CKLF-CMTM1,CKLF-CMTM1,TK2,CKLF,TK2,CKLF-CMTM1,CKLF,TK2,TK2,CKLF,CKLF,CKLF	-341,-341,-2441,-341,-2562,-341,-341,-2441,-2441,-341,-341,-341
chr1:161184656-161184962	chr1	+	161184815	161184991	True	NM_004106,NM_001643	chr1,chr1	+,-	FCER1G,APOA2	95,8477
chr19:49222079-49222296	chr19	+	49222207	49222289	True	NM_001130915,NM_001097638,NM_182574	chr19,chr19,chr19	-,+,-	MAMSTR,FUT2,MAMSTR	737,-23030,-1993
chr4:76912100-76912479	chr4	+	76912120	76912372	True	NM_018115,NM_001130017	chr4,chr4	-,+	SDAD1,ART3	-7,19964
chr10:68777658-68779067	chr10	+	68777992	68778829	True	NM_001127384,NM_178011	chr10,chr10	-,+	CTNNA3,LRRTM3	646652,-92264
chr12:57483523-57483802	chr12	+	57483576	57483740	True	NM_015257,NM_005967	chr12,chr12	-,+	TMEM194A,NAB2	-11002,-950
chr5:33935966-33936222	chr5	+	33936034	33936133	True	NM_016568,NM_030955	chr5,chr5	+,-	RXFP3,ADAMTS12	357,-43910
chr12:7281207-7281492	chr12	+	7281281	7281517	True	NM_014718,NM_031491	chr12,chr12	+,-	CLSTN3,RBP5	1449,-1
chr19:52774332-52774692	chr19	+	52774437	52774681	True	NM_001010851,NM_001102657	chr19,chr19	+,-	ZNF766,ZNF836	-1670,-99541
chr3:173115735-173116022	chr3	+	173115816	173115998	True	NM_014932,NM_031955	chr3,chr3	+,-	NLGN1,SPATA16	245,-256758
chr19:45417791-45418137	chr19	+	45417958	45418056	True	NM_145288,NM_001645,NM_000041	chr19,chr19,chr19	-,+,+	ZNF296,APOC1,APOE	161682,-88,-8970
chr3:10184321-10184560	chr3	+	10184320	10184598	True	NM_000551,NM_198156,NM_001164839	chr3,chr3,chr3	+,+,-	VHL,VHL,C3orf24	-1052,-1052,-34405
chrX:70520357-70521912	chrX	+	70521053	70521861	True	NM_001171162,NM_012278	chrX,chrX	-,+	ZMYM3,ITGB1BP2	-46006,-38
chr11:61160267-61160591	chr11	+	61160295	61160517	True	NM_001173990,NM_001173991,NM_153611,NM_016499	chr11,chr11,chr11,chr11	+,+,-,+	TMEM216,TMEM216,CYBASC3,TMEM216	-514,-514,-30540,-481
chr5:140188179-140188390	chr5	+	140188189	140188415	True	NM_031500,NM_031497,NM_018907,NM_018906,NM_002109	chr5,chr5,chr5,chr5,chr5	+,+,+,+,-	PCDHA4,PCDHA3,PCDHA4,PCDHA3,HARS	-1568,-7457,-1568,-7457,-117218
chr15:51604770-51606637	chr15	+	51604811	51606377	True	NM_000103,NM_181789	chr15,chr15	-,+	CYP19A1,GLDN	24468,27335
chr2:110369191-110370955	chr2	+	110369316	110370943	True	NM_023016,NM_178584,NM_144710	chr2,chr2,chr2	+,-,-	ANKRD57,SEPT10,SEPT10	967,890,890
chr10:81837571-81838100	chr10	+	81837571	81837772	True	NR_027430,NR_027431,NR_027432,NR_027429,NR_027428,NM_025125	chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,-,+	LOC219347,LOC219347,LOC219347,LOC219347,LOC219347,C10orf57	1236,1236,1236,1236,1236,653
chr1:28878321-28878536	chr1	+	28878340	28878412	True	NM_017846,NR_003109,NR_003077	chr1,chr1,chr1	+,+,-	TRNAU1AP,TRNAU1AP,SNORD99	1116,1116,26982
chr1:40918010-40918678	chr1	+	40918025	40918313	True	NM_023070,NM_001852	chr1,chr1	+,-	ZNF643,COL9A2	-1746,-135086
chr6:4773557-4775403	chr6	+	4773610	4775216	True	NM_006638,NM_004824	chr6,chr6	-,+	RPP40,CDYL	229105,1463
chr8:95733333-95734191	chr8	+	95733480	95734016	True	NM_181787,NR_034034	chr8,chr8	+,-	DPY19L4,LOC100288748	-1434,-81785
chr15:45314507-45314926	chr15	+	45314524	45314858	True	NR_034039,NM_003104,NM_014080	chr15,chr15,chr15	+,+,-	SORD,SORD,DUOX2	443,443,91551
chr19:42496342-42496629	chr19	+	42496421	42496617	True	NM_152296,NM_022752	chr19,chr19	-,+	ATP1A3,ZNF574	1815,83672
chr22:28698753-28699993	chr22	+	28698835	28699968	True	NM_001145418,NR_036170	chr22,chr22	-,+	TTC28,MIR3199-2	375937,-382372
chr13:30947307-30947644	chr13	+	30947435	30947625	True	NM_005800,NR_024464	chr13,chr13	+,-	USPL1,LOC100188949	244204,469
chr11:64510606-64510912	chr11	+	64510606	64510874	True	NM_001098671,NM_001098670,NM_153378,NM_153819	chr11,chr11,chr11,chr11	-,-,+,-	RASGRP2,RASGRP2,SLC22A12,RASGRP2	806,1505,-152375,2104
chr17:20225354-20225598	chr17	+	20225516	20225599	True	NM_001042685,NR_023380	chr17,chr17	-,+	LGALS9B,CCDC144C	145300,-1091
chr17:20225354-20225598	chr17	+	16594309	16594384	False	NM_020787,NM_014695	chr17,chr17	-,+	ZNF624,CCDC144A	-37142,-725
chr17:20225354-20225598	chr17	-	20798657	20798716	False	NM_001004306,NM_015510	chr17,chr17	-,+	CCDC144NL,DHRS7B	787,231541
chr8:91808203-91808990	chr8	+	91808379	91809002	True	NM_001146273,NM_022351	chr8,chr8	-,+	TMEM64,NECAB1	-150246,-4509
chr2:75426839-75427091	chr2	+	75426869	75427067	True	NM_015727,NM_019896,NM_001058	chr2,chr2,chr2	-,+,-	TACR1,POLE4,TACR1	-224,-241145,-224
chr7:131450819-131451069	chr7	+	131450837	131451011	True	NM_005397,NM_013255	chr7,chr7	-,+	PODXL,MKLN1	-209461,-438294
chr9:71970659-71972093	chr9	+	71970726	71971840	True	NM_001163,NM_004816	chr9,chr9	-,+	APBA1,FAM189A2	315485,-26536
chr11:107436530-107438265	chr11	+	107436533	107438297	True	NM_138775,NM_001130037	chr11,chr11	-,+	ALKBH8,ELMOD1	-72,23519
chr19:42082265-42084095	chr19	+	42082342	42084134	True	NM_001098506,NM_033543,NM_001817	chr19,chr19,chr19	+,+,-	CEACAM21,CEACAM21,CEACAM4	135,135,49358
chr10:90661757-90662619	chr10	+	90661814	90662331	True	NM_144590,NM_020799,NM_001613	chr10,chr10,chr10	-,+,-	ANKRD22,STAMBPL1,ACTA2	-50082,-21848,50302
chr17:74582393-74583757	chr17	+	74582649	74583661	True	NM_006456,NR_004395	chr17,chr17	-,+	ST6GALNAC2,SNORD1A	-504,-24985
chr13:25494849-25495300	chr13	+	25495118	25495332	True	NM_018451,NM_031277	chr13,chr13	-,+	CENPJ,RNF17	1803,-156868
chr2:218809970-218810604	chr2	+	218810252	218810496	True	NR_034176,NM_022648	chr2,chr2	+,-	RUFY4,TNS1	89160,-1456
chr21:41027363-41028081	chr21	+	41027434	41028082	True	NR_026543,NM_006057,NM_033171,NM_033170,NM_033173,NM_033172	chr21,chr21,chr21,chr21,chr21,chr21	-,+,+,+,+,+	C21orf88,B3GALT5,B3GALT5,B3GALT5,B3GALT5,B3GALT5	-42685,1171,1171,1171,1171,1171
chr1:212605477-212606120	chr1	+	212605579	212606106	True	NR_026598,NM_013349,NM_018252	chr1,chr1,chr1	+,+,-	NENF,NENF,TMEM206	122,122,-17312
chr17:74636826-74637814	chr17	+	74636825	74637863	True	NM_018414,NR_004395	chr17,chr17	-,+	ST6GALNAC1,SNORD1A	2081,-79170
chr3:9742592-9743580	chr3	+	9742821	9743530	True	NM_003656,NM_153635	chr3,chr3	-,+	CAMK1,CPNE9	68188,1979
chr17:4902687-4903212	chr17	+	4902700	4903019	True	NM_001167986,NM_001167987,NM_006612,NM_001167985,NM_213726	chr17,chr17,chr17,chr17,chr17	-,-,+,-,-	INCA1,INCA1,KIF1C,INCA1,INCA1	-1795,-1795,-1508,-1795,-1795
chr7:35838836-35839897	chr7	+	35838957	35839823	True	NM_022373,NM_001788,NM_001011553	chr7,chr7,chr7	-,+,+	HERPUD2,SEPT7,SEPT7	-104185,803,803
chr12:69004106-69004504	chr12	+	69004105	69004353	True	NM_015646,NM_001010942,NR_033335	chr12,chr12,chr12	+,+,-	RAP1B,RAP1B,SNORA70G	298,298,16852
chr11:73018089-73018672	chr11	+	73018196	73018493	True	NM_014824,NM_014786	chr11,chr11	-,+	FCHSD2,ARHGEF17	-165053,1169
chr2:107104907-107105549	chr2	+	107105057	107105307	True	NM_001144013,NR_003506	chr2,chr2	-,+	RGPD3,PLGLA	-20256,-102339
chr16:85725347-85726179	chr16	+	85725470	85726197	True	NM_014615,NM_016095	chr16,chr16	+,-	KIAA0182,GINS2	-78608,-2882
chr20:45317039-45317642	chr20	+	45317088	45317606	True	NM_030777,NM_001011554,NM_001193340,NM_033550	chr20,chr20,chr20,chr20	+,-,-,-	SLC2A10,SLC13A3,SLC13A3,TP53RK	20672,-3964,-3964,720
chr11:36596976-36597373	chr11	+	36597038	36597413	True	NM_000448,NM_000536	chr11,chr11	+,-	RAG1,RAG2	-7526,22467
chr16:88753854-88754511	chr16	+	88753926	88754558	True	NM_001012759,NM_178310	chr16,chr16	+,-	CTU2,SNAI3	18332,-1044
chr1:27154160-27154366	chr1	+	27154288	27154348	True	NM_018066,NM_032283	chr1,chr1	-,+	GPN2,ZDHHC18	62571,-1138
chr3:8774324-8774775	chr3	+	8774328	8774768	True	NM_033337,NM_000916,NM_001234	chr3,chr3,chr3	+,-,+	CAV3,OXTR,CAV3	717,36582,727
chr11:61202495-61203108	chr11	+	61202864	61203144	True	NM_001136040,NM_001142565,NM_017841,NM_024811	chr11,chr11,chr11,chr11	-,-,+,-	CPSF7,CPSF7,SDHAF2,CPSF7	-5400,-5400,-5321,-5481
chr20:31820325-31821753	chr20	+	31820346	31821576	True	NM_016583,NM_016082,NM_130852	chr20,chr20,chr20	+,-,+	PLUNC,CDK5RAP1,PLUNC	2225,167811,2225
chr7:150675863-150676202	chr7	+	150675863	150676195	True	NM_000238,NM_172056,NM_000603	chr7,chr7,chr7	-,-,+	KCNH2,KCNH2,NOS3	-461,-461,11948
chr5:140502700-140503191	chr5	+	140502710	140502918	True	NM_031947,NM_018938	chr5,chr5	-,+	SLC25A2,PCDHB4	180744,-1186
chr8:94754768-94755903	chr8	+	94755210	94755604	True	NM_203390,NR_027259	chr8,chr8	-,+	RBM12B,C8orf39	-1986,-2924
chr5:140515003-140515257	chr5	+	140515005	140515303	True	NM_015669,NM_031947	chr5,chr5	+,-	PCDHB5,SLC25A2	-256,168367
chr2:120190602-120190817	chr2	+	120190647	120190849	True	NM_001017927,NM_183240	chr2,chr2	-,+	C2orf76,TMEM37	-66389,-1252
chr2:44291433-44292755	chr2	+	44291669	44292278	True	NM_133259,NM_001033556	chr2,chr2	-,+	LRPPRC,PPM1B	-68525,103721
chr15:25486847-25487149	chr15	+	25487000	25487166	True	NR_003344,NR_003358,NM_130838,NR_003349,NR_003353,NR_003352,NR_003351,NR_003350,NR_003357,NR_003356,NR_003355,NR_003354,NR_003302,NR_003303,NR_003359	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,-,+,+,+,+,+,+,+,+,+,+,+,+	SNORD115-29,SNORD115-43,UBE3A,SNORD115-34,SNORD115-38,SNORD115-37,SNORD115-36,SNORD115-35,SNORD115-42,SNORD115-41,SNORD115-40,SNORD115-39,SNORD115-10,SNORD115-11,SNORD115-44	-5819,-5819,163537,-9517,-2066,-3918,-5819,-7657,5325,3458,1594,-158,5325,-5819,8839
chr20:43101801-43102664	chr20	+	43102031	43102441	True	NM_198941,NM_024331,NM_001039199	chr20,chr20,chr20	-,+,+	SERINC3,TTPAL,TTPAL	48335,2105,2105
chrX:100489406-100489637	chrX	+	100489409	100489657	True	NM_001939,NM_001168474	chrX,chrX	+,-	DRP2,TAF7L	-14527,56718
chr10:69589290-69590086	chr10	+	69589426	69589746	True	NM_201262,NM_021800,NM_012238	chr10,chr10,chr10	-,-,+	DNAJC12,DNAJC12,SIRT1	8251,8251,54680
chr3:64195631-64196203	chr3	+	64195671	64196127	True	NM_198859,NM_001128149	chr3,chr3	-,+	PRICKLE2,ATXN7	15054,-242302
chr1:41131587-41131872	chr1	+	41131700	41131876	True	NM_001142587,NM_014747	chr1,chr1	+,-	NFYC,RIMS3	25365,-376
chrX:109764119-109764442	chr3	+	46619391	46619441	True	NM_003212,NM_024512,NM_001174136	chr3,chr3,chr3	+,-,+	TDGF1,LRRC2,TDGF1	-366,-11380,-3397
chr9:125020638-125022266	chr9	+	125021309	125021998	True	NM_033117,NM_138777,NR_027126,NM_001173512,NR_027125	chr9,chr9,chr9,chr9,chr9	-,+,-,+,-	RBM18,MRRF,RBM18,MRRF,RBM18	5208,4883,5208,4883,5208
chr3:45869770-45871017	chr3	+	45869821	45870700	True	NM_020347,NM_006641	chr3,chr3	-,+	LZTFL1,CCR9	12987,57295
chr5:180255116-180255360	chr5	+	180255228	180255348	True	NR_027183,NM_001114617	chr5,chr5	+,-	LOC729678,MGAT1	1610,-18091
chr8:11203089-11204415	chr8	+	11203114	11204371	True	NR_001578,NM_053279	chr8,chr8	+,-	TDH,FAM167A	-6019,119955
chr14:63547782-63548619	chr14	+	63547827	63548600	True	NM_172376,NM_020663	chr14,chr14	-,+	KCNH5,RHOJ	20035,122544
chr12:86212796-86214643	chr12	+	86212905	86214556	True	NM_006183,NM_005447	chr12,chr12	+,-	NTS,RASSF9	53516,15819
chr16:14415119-14417045	chr16	+	14415497	14416549	True	NR_029854,NM_001134477	chr16,chr16	+,-	MIR365-1,PARN	-12406,307626
chr22:50969349-50969552	chr22	+	50969370	50969490	True	NM_005138,NM_001953,NM_001169111,NM_001169110,NM_001113756,NM_001169109,NM_001113755,NM_001014440,NM_138433	chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,-,-,-,-,+	SCO2,TYMP,SCO2,SCO2,TYMP,SCO2,TYMP,ODF3B,KLHDC7B	-5336,-856,-5337,-4796,-1112,-4502,-856,1568,16971
chr14:66963237-66963844	chr14	+	66963292	66963874	True	NM_015994,NM_001024218,NR_024339	chr14,chr14,chr14	-,+,+	ATP6V1D,GPHN,NCRNA00238	862896,10250,-10235
chr4:2264666-2264957	chr4	+	2264704	2264818	True	NM_001193282,NM_006454	chr4,chr4	+,-	LOC402160,MXD4	155882,-965
chr3:128211767-128211991	chr3	+	128211868	128211994	True	NM_001145662,NM_001145661,NR_026954,NM_032638	chr3,chr3,chr3,chr3	-,-,+,-	GATA2,GATA2,LOC90246,GATA2	-5104,-4495,14683,86
chr4:70600829-70601136	chr4	+	70600873	70601183	True	NM_014465,NM_001025104	chr4,chr4	-,+	SULT1B1,CSN1S1	25297,195615
chr7:55981950-55982638	chr7	+	55981949	55982539	True	NM_182633,NM_207366	chr7,chr7	+,-	ZNF713,SEPT14	-1682,-51467
chr12:10956552-10956853	chr12	+	10956551	10956665	True	NM_023918,NM_023919,NM_023917,NM_005042	chr12,chr12,chr12,chr12	-,-,-,+	TAS2R8,TAS2R7,TAS2R9,PRH2	2964,-1325,6152,125168
chr19:18120515-18120737	chr19	+	18120596	18120718	True	NM_015683,NM_001025604,NM_005535	chr19,chr19,chr19	+,+,-	ARRDC2,ARRDC2,IL12RB1	-1670,-8703,77029
chr18:14544723-14545061	chr18	+	14544968	14545073	True	NM_001137671,NM_001145029	chr18,chr18	-,+	POTEC,ANKRD30B	-1369,203165
chr15:101820660-101820916	chr15	+	101820674	101820772	True	NM_024652,NM_018445,NM_203472	chr15,chr15,chr15	+,-,-	LRRK1,SELS,SELS	-361265,-2974,-2974
chr2:70142028-70142248	chr2	+	70142028	70142290	True	NM_001202513,NM_001202514,NM_002357,NM_152792	chr2,chr2,chr2,chr2	+,+,+,-	MXD1,MXD1,MXD1,ASPRV1	-88,-88,-88,47157
chr3:128187471-128188492	chr3	+	128187520	128188454	True	NM_153330,NR_037890	chr3,chr3	-,+	DNAJB8,LOC285224	-1429,-5134
chr1:12039047-12039579	chr1	+	12039143	12039203	True	NM_001127660,NM_014874,NM_138346	chr1,chr1,chr1	+,+,-	MFN2,MFN2,KIAA2013	1034,1034,-52658
chr12:19401357-19403238	chr12	+	19401508	19403197	True	NM_019012,NM_033123	chr12,chr12	+,-	PLEKHA5,PLCZ1	-118942,-510590
chr8:134308682-134309229	chr8	+	134308745	134309075	True	NM_001135242,NR_037944,NM_006096	chr8,chr8,chr8	-,+,-	NDRG1,WISP1,NDRG1	522,-105514,522
chr16:330868-331146	chr16	+	330920	330980	True	NM_183337,NM_006849,NM_001176,NM_003834	chr16,chr16,chr16,chr16	-,+,+,-	RGS11,PDIA2,ARHGDIG,RGS11	-5006,2137,-365,-5006
chr20:33106819-33107658	chr20	+	33106995	33107692	True	NM_080476,NM_014183	chr20,chr20	-,+	PIGU,DYNLRB1	157448,-2851
chr17:58310066-58311565	chr17	+	58310240	58311307	True	NM_000717,NR_002999	chr17,chr17	+,-	CA4,SCARNA20	-82998,-1234
chr3:71777685-71777962	chr3	+	71777685	71778003	True	NM_001134650,NM_001134651,NM_018971	chr3,chr3,chr3	-,-,+	EIF4E3,EIF4E3,GPR27	316,-3159,25197
chrX:155113668-155113881	chrY	+	59216675	59216789	False	NM_005638,NR_033714,NR_033715,NM_001185183,NR_002179,NM_001145149	chrY,chrY,chrY,chrY,chrY,chrY	+,+,+,+,-,+	VAMP7,VAMP7,VAMP7,VAMP7,TTTY17C,VAMP7	-2783,-2783,-2783,-2783,-31885755,-2783
chrX:155113668-155113881	chrX	+	155113669	155113783	True	NM_005638,NR_033714,NR_033715,NM_018196,NM_001185183,NM_001145149	chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,-,+,+	VAMP7,VAMP7,VAMP7,TMLHE,VAMP7,VAMP7	-2783,-2783,-2783,-271047,-2783,-2783
chr17:3601233-3602820	chr17	+	3601280	3602210	True	NM_031965,NM_002561,NM_175080,NR_037928,NM_001204520,NM_001204519	chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,-,-,-	GSG2,P2RX5,P2RX5,P2RX5-TAX1BP3,P2RX5,P2RX5	24986,-1582,-1582,-1582,-1582,-1582
chr21:43634102-43634596	chr21	+	43634101	43634526	True	NM_004915,NM_207174,NM_003226,NM_016818,NM_207629	chr21,chr21,chr21,chr21,chr21	+,+,-,+,+	ABCG1,ABCG1,TFF3,ABCG1,ABCG1	4740,5481,101239,4740,1660
chr7:28338788-28339595	chr7	+	28338827	28339633	True	NM_182899,NM_175061	chr7,chr7	+,-	CREB5,JAZF1	62,-118390
chr1:155208931-155209974	chr1	+	155209399	155209962	True	NM_000157,NM_001171812,NM_001171811,NM_198883,NM_001005742,NM_001005741	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,-	GBA,GBA,GBA,MTX1,GBA,GBA	1158,1155,4742,-30961,4742,4742
chr4:175441697-175442476	chr4	+	175441876	175442489	True	NM_000860,NR_036236,NR_027332,NM_001145816	chr4,chr4,chr4,chr4	-,+,-,-	HPGD,MIR4276,HPGD,HPGD	1360,-96989,1612,1360
chr19:1026833-1027389	chr19	+	1027041	1027358	True	NM_004368,NM_033420,NM_001033026,NM_201277	chr19,chr19,chr19,chr19	+,-,-,+	CNN2,C19orf6,C19orf6,CNN2	-794,-5900,-5900,-794
chr22:22898354-22899802	chr22	+	22898358	22899474	True	NR_027426,NM_006115,NM_206953,NM_206955,NM_206954,NM_206956	chr22,chr22,chr22,chr22,chr22,chr22	+,-,-,-,-,-	LOC648691,PRAME,PRAME,PRAME,PRAME,PRAME	2281,2272,2272,2126,2272,2126
chr2:208994305-208995006	chr2	+	208994386	208995048	True	NM_020989,NM_006891,NM_001178000	chr2,chr2,chr2	-,-,+	CRYGC,CRYGD,PIKFYVE	-16,-5073,135942
chr20:10199380-10199594	chr20	+	10199435	10199619	True	NM_130811,NM_018848,NM_003081	chr20,chr20,chr20	+,-,+	SNAP25,MKKS,SNAP25	-9,213001,-9
chr3:57529628-57530029	chr3	+	57529785	57530067	True	NM_198564,NM_178504,NM_177966	chr3,chr3,chr3	-,-,+	DNAH12,DNAH12,PDE12	54,54,11913
chr15:56495843-56496309	chr15	+	56496023	56496183	True	NM_022841,NM_198524	chr15,chr15	-,+	RFX7,TEX9	39358,161460
chr1:51810724-51810972	chr1	+	51810860	51811010	True	NM_014372,NM_001144832	chr1,chr1	+,-	RNF11,TTC39A	-108966,-75
chr3:152553368-152553589	chr3	+	152553446	152553600	True	NM_002563,NM_001123228	chr3,chr3	+,-	P2RY1,TMEM14E	-761,-494667
chr21:43440882-43441831	chr21	+	43441057	43441697	True	NR_027273,NM_020727	chr21,chr21	+,-	C21orf121,ZNF295	415,-10561
chr22:18925067-18927038	chr22	+	18925167	18925686	True	NM_001195226,NM_005675,NM_016335	chr22,chr22,chr22	-,+,-	PRODH,DGCR6,PRODH	-1203,-31482,-1101
chr22:18925067-18927038	chr22	-	20281097	20281405	False	NM_023004,NR_026919	chr22,chr22	-,+	RTN4R,LOC150197	-25281,-87294
chr2:87036296-87036612	chr2	+	87036473	87036617	True	NM_001145873,NR_037931	chr2,chr2	-,+	CD8A,LOC100286979	-954,52330
chr3:186264542-186265554	chr3	+	186264640	186265378	True	NM_016306,NM_017541	chr3,chr3	+,-	DNAJB11,CRYGS	23088,-2473
chr17:37893417-37894467	chr17	+	37893634	37894373	True	NM_032339,NM_001030002,NM_005310	chr17,chr17,chr17	-,+,+	C17orf37,GRB7,GRB7	-6846,216,57
chr3:45926041-45927587	chr3	+	45926217	45927585	True	NM_020347,NM_006641,NM_031200,NR_036525	chr3,chr3,chr3,chr3	-,+,+,+	LZTFL1,CCR9,CCR9,CCR9	-42596,410,410,410
chr4:36312749-36314676	chr4	+	36312764	36314535	True	NM_001170700,NM_015230	chr4,chr4	+,-	DTHD1,ARAP2	-27171,-66785
chr3:113679998-113681644	chr3	+	113680339	113681506	True	NM_173570,NM_020817	chr3,chr3	+,-	ZDHHC23,KIAA1407	-13642,94004
chr1:55682589-55683520	chr1	+	55682635	55683546	True	NM_015306,NM_174936	chr1,chr1	-,+	USP24,PCSK9	-1596,-177538
chr22:26139053-26140418	chr22	+	26139132	26140372	True	NM_001135772,NM_032608	chr22,chr22	-,+	LRP5L,MYO18B	-361588,-1063
chr19:5790279-5790929	chr19	+	5790315	5790619	True	NM_020175,NM_001134316,NM_001161619,NM_004558	chr19,chr19,chr19,chr19	-,-,-,+	DUS3L,PRR22,DUS3L,NRTN	680,-5539,680,33198
chr4:88343700-88343972	chr4	+	88343705	88343945	True	NM_198038,NM_024047,NM_016245	chr4,chr4,chr4	+,+,-	NUDT9,NUDT9,HSD17B11	-21,-21,-31250
chr6:17389242-17389710	chr6	+	17389426	17389754	True	NM_006366,NM_005124	chr6,chr6	+,-	CAP2,NUP153	3981,317114
chr20:31644625-31644952	chr20	+	31644631	31644851	True	NM_182658,NM_080675	chr20,chr20	+,-	C20orf185,SUN5	-1452,-52392
chr13:51668226-51669823	chr13	+	51668227	51669798	True	NR_003923,NM_145019	chr13,chr13	-,+	GUCY1B2,FAM124A	-27934,126708
chr14:58863734-58864178	chr14	+	58863842	58864214	True	NM_012460,NM_207377	chr14,chr14	-,+	TIMM9,TOMM20L	30068,-1250
chr20:30225004-30225515	chr20	+	30225328	30225510	True	NM_032609,NM_001191	chr20,chr20	+,-	COX4I2,BCL2L1	180,85196
chr2:27303151-27304320	chr2	+	27303249	27304241	True	NM_007046,NM_006488,NM_000221,NM_001134693	chr2,chr2,chr2,chr2	+,+,+,-	EMILIN1,KHK,KHK,OST4	-1865,5369,5369,-8682
chr5:145470471-145472195	chr5	+	145470751	145472041	True	NM_018989,NM_001029869	chr5,chr5	+,-	RBM27,PLAC8L1	111121,11968
chr17:59533512-59533767	chr17	+	59533613	59533709	True	NM_199290,NM_018488	chr17,chr17	-,+	NACA2,TBX4	134904,97
chr12:96586929-96587665	chr12	+	96586947	96587711	True	NM_000895,NM_005230	chr12,chr12	-,+	LTA4H,ELK3	-157582,495
chr16:89160965-89161532	chr16	+	89160968	89161494	True	NM_001127214,NR_023316,NM_174917,NM_005187	chr16,chr16,chr16,chr16	+,+,+,-	ACSF3,ACSF3,ACSF3,CBFA2T3	-765,-765,-765,-117464
chr9:88876072-88877589	chr9	+	88876104	88877556	True	NM_024635,NM_001010907	chr9,chr9	+,-	NAA35,C9orf153	-320105,-1585
chr2:20731238-20731855	chr2	+	20731238	20731558	True	NM_022460,NM_004040	chr2,chr2	-,+	HS1BP3,RHOB	119356,-84454
chr17:58751796-58752552	chr17	+	58751807	58752590	True	NM_017679,NM_001099432,NM_006380	chr17,chr17,chr17	+,+,-	BCAS3,BCAS3,APPBP2	2581,2581,-148227
chr9:88552724-88554061	chr9	+	88553039	88553849	True	NM_024635,NM_016548	chr9,chr9	+,-	NAA35,GOLM1	2207,160711
chr14:39585711-39586330	chr14	+	39585757	39586205	True	NM_006364,NM_003616,NM_001009183,NM_001009182	chr14,chr14,chr14,chr14	-,+,+,+	SEC23A,SIP1,SIP1,SIP1	-13320,-2327,-2327,-2327
chr11:123513226-123513508	chr11	+	123513226	123513400	True	NM_020716,NM_001040151	chr11,chr11	+,-	GRAMD1B,SCN3B	-116749,11965
chr9:84304981-84305501	chr9	+	84305059	84305457	True	NM_005077,NR_026851	chr9,chr9	-,+	TLE1,FAM75D5	-1463,222894
chr2:193060346-193060592	chr2	+	193060403	193060603	True	NM_001031716,NM_016192	chr2,chr2	+,-	OBFC2A,TMEFF2	-517593,-759
chr6:26421666-26421881	chr6	+	26421669	26421879	True	NR_027795,NM_003543	chr6,chr6	+,-	BTN2A3,HIST1H4H	-101,-135942
chr16:128943-129585	chr16	+	128956	129616	True	NM_001015052,NM_022450,NM_002434,NM_001015054	chr16,chr16,chr16,chr16	+,-,+,+	MPG,RHBDF1,MPG,MPG	-838,-6327,-838,-1989
chr9:94186863-94187179	chr9	+	94186902	94187171	True	NR_037472,NM_005384	chr9,chr9	+,-	MIR3910-1,NFIL3	211361,-758
chr5:36246187-36246617	chr5	+	36246275	36246566	True	NM_001085411,NM_153013,NM_032637	chr5,chr5,chr5	-,-,+	C5orf33,C5orf33,SKP2	-4375,-4017,-94144
chr17:39891654-39891985	chr17	+	39891917	39892041	True	NM_000805,NM_177977,NM_001079870,NM_001079871	chr17,chr17,chr17,chr17	+,-,-,-	GAST,HAP1,HAP1,HAP1	-23362,-1019,-1019,-1019
chr6:14794712-14795704	chr6	+	14794852	14795653	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	450873,867686
chr6:41004983-41006303	chr6	+	41005003	41006347	True	NM_173561,NM_001010873,NM_001159726	chr6,chr6,chr6	-,+,+	UNC5CL,TSPO2,TSPO2	641,3889,4109
chr19:17186657-17187066	chr19	+	17186686	17186976	True	NM_001130065,NM_001011699,NM_033417,NM_004145	chr19,chr19,chr19,chr19	+,-,-,+	MYO9B,HAUS8,HAUS8,MYO9B	-146,-343,-343,-146
chr17:42443293-42444297	chr17	+	42443424	42444137	True	NM_198475,NM_002087	chr17,chr17	-,+	FAM171A2,GRN	-2189,-20984
chr12:93100933-93101469	chr12	+	93100939	93101402	True	NM_001178097,NM_001037671,NM_003566	chr12,chr12,chr12	+,+,-	C12orf74,C12orf74,EEA1	-4373,-4373,221762
chr10:124737715-124738204	chr10	+	124737786	124737974	True	NM_153336,NM_024942	chr10,chr10	+,-	PSTK,C10orf88	1581,-23867
chr9:137001629-137001879	chr9	+	137001810	137001928	True	NR_023344,NM_017588,NM_052821	chr9,chr9,chr9	-,+,+	RNU6ATAC,WDR5,WDR5	27808,-651,2985
chr8:42912087-42912821	chr8	+	42912181	42912765	True	NR_027669,NR_033698,NM_002027	chr8,chr8,chr8	-,+,+	RNF170,FNTA,FNTA	-160315,-790,-790
chr9:46685611-46687423	chr9	+	46685648	46687326	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-3054918,239
chr9:46685611-46687423	chr9	+	44243902	44243963	False	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	-613172,-559079
chr9:46685611-46687423	chr9	+	41952598	41952963	False	NR_015363,NM_001012421	chr9,chr9	-,+	MGC21881,ANKRD20A2	2174,415339
chr9:46685611-46687423	chr9	-	42019715	42021393	False	NR_003670,NM_001012421	chr9,chr9	-,+	KGFLP2,ANKRD20A2	-131,346909
chr6:108883328-108883718	chr6	+	108883337	108883689	True	NM_201559,NM_152827,NM_001455	chr6,chr6,chr6	+,-,+	FOXO3,SNX3,FOXO3	-2362,-300873,-1319
chr5:67585552-67586507	chr5	+	67585613	67586549	True	NM_181524,NM_181504,NM_176816	chr5,chr5,chr5	+,+,-	PIK3R1,PIK3R1,CCDC125	-1416,-55,1029917
chr7:150147925-150148187	chr7	+	150148051	150148155	True	NM_175571,NM_002889	chr7,chr7	+,-	GIMAP8,RARRES2	-140,-109288
chr12:51565454-51566122	chr12	+	51565592	51566074	True	NM_005653,NM_001136264,NM_001173453,NM_001173452	chr12,chr12,chr12,chr12	-,+,-,-	TFCP2,DAZAP2,TFCP2,TFCP2	903,66433,903,903
chr11:123883703-123885251	chr11	+	123883703	123885161	True	NM_001001953,NM_001004463,NM_001004462	chr11,chr11,chr11	+,-,+	OR10G9,OR10G7,OR10G4	8558,24606,1120
chr8:142239036-142239588	chr8	+	142239197	142239551	True	NM_014957,NM_001080431	chr8,chr8	+,-	DENND3,SLC45A4	-100529,-524
chr15:74217219-74217902	chr15	+	74217241	74217871	True	NM_004809,NM_005576	chr15,chr15	-,+	STOML1,LOXL1	66814,917
chr1:79459551-79460894	chr1	+	79459685	79460805	True	NM_022159,NM_006417	chr1,chr1	-,+	ELTD1,IFI44	11749,-344268
chr11:27384912-27385612	chr11	+	27385135	27385662	True	NR_002832,NM_080654,NM_030771	chr11,chr11,chr11	+,-,-	BDNF-AS1,CCDC34,CCDC34	142736,-340,-340
chr17:14205542-14205754	chr17	+	14205541	14205699	True	NR_026880,NM_006041,NM_001007530	chr17,chr17,chr17	+,+,-	MGC12916,HS3ST3B1,CDRT15	1357,-1086,-65391
chr6:26404301-26405418	chr6	+	26404579	26405361	True	NM_194441,NM_001145009,NM_001145008,NM_003543,NM_007048	chr6,chr6,chr6,chr6,chr6	+,+,+,-,+	BTN3A1,BTN3A1,BTN3A1,HIST1H4H,BTN3A1	-2165,-2165,-2165,-118852,-2165
chr1:1338915-1339624	chr1	+	1338960	1339163	True	NM_001039577,NM_017971,NR_015434,NM_030937	chr1,chr1,chr1,chr1	-,-,+,-	CCNL2,MRPL20,LOC148413,CCNL2	-4242,3581,-4101,-4242
chrX:118108701-118108920	chrX	+	118108728	118108818	True	NM_001031855,NM_024778,NM_020721	chrX,chrX,chrX	+,+,-	LONRF3,LONRF3,KIAA1210	-66,-66,175774
chr1:182370147-182370392	chr1	+	182370147	182370207	True	NR_034131,NM_001033044,NM_002065,NM_001033056,NM_172000	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	NCRNA00272,GLUL,GLUL,GLUL,TEDDM1	6548,-8806,-8806,-9608,-396
chr9:112893853-112894710	chr9	+	112893877	112894241	True	NM_001136562,NM_001012993	chr9,chr9	+,-	AKAP2,C9orf152	-6148,76222
chr11:118276717-118277515	chr11	+	118276910	118277548	True	NR_033759,NM_001040651,NM_006476	chr11,chr11,chr11	+,-,+	ATP5L,CD3D,ATP5L	-4865,-63451,-4865
chr11:57365889-57366705	chr11	+	57365912	57366718	True	NM_001032295,NM_000062,NM_198183	chr11,chr11,chr11	+,+,-	SERPING1,SERPING1,UBE2L6	-258,-936,-30459
chr19:4246460-4246909	chr19	+	4246602	4246950	True	NM_001169126,NM_018074	chr19,chr19	-,+	TMIGD2,CCDC94	55528,160
chr22:37957623-37957923	chr22	+	37957736	37957972	True	NM_152243,NM_006498	chr22,chr22	+,-	CDC42EP1,LGALS2	-1316,18102
chr5:36606651-36607005	chr5	+	36606675	36607039	True	NM_001166695,NM_001166696,NM_004172,NM_145000	chr5,chr5,chr5,chr5	+,+,+,-	SLC1A3,SLC1A3,SLC1A3,RANBP3L	1391,-269,-269,-304664
chr22:20793593-20793943	chr22	+	20793699	20793987	True	NM_182895,NM_153334,NR_003253	chr22,chr22,chr22	-,-,+	SCARF2,SCARF2,ZNF74	-1553,-1553,-45270
chr2:153573929-153574750	chr2	+	153573938	153574747	True	NM_152522,NR_024526,NM_017892	chr2,chr2,chr2	+,+,-	ARL6IP6,ARL6IP6,PRPF40A	-9,-9,37
chr17:72429373-72430059	chr17	+	72429436	72430030	True	NM_022036,NM_018653,NM_001080466	chr17,chr17,chr17	+,+,-	GPRC5C,GPRC5C,BTBD17	-1820,31,-71478
chr13:113864214-113864414	chr13	+	113864281	113864407	True	NM_001127203,NM_003589,NM_001127202,NM_001008895,NM_018386	chr13,chr13,chr13,chr13,chr13	-,+,-,+,-	PCID2,CUL4A,PCID2,CUL4A,PCID2	-1252,-1246,-1252,-401,-1252
chr3:125690930-125691190	chr3	+	125690933	125691211	True	NM_001012337,NM_001195223	chr3,chr3	+,-	ROPN1B,ALG1L	-2956,-35046
chr14:90862142-90862967	chr14	+	90862144	90862804	True	NM_006888,NM_001166106,NM_199043	chr14,chr14,chr14	+,+,-	CALM1,CALM1,C14orf102	522,1801,-63865
chr19:11667205-11668968	chr19	+	11667452	11669003	True	NM_032377,NM_001299	chr19,chr19	-,+	ELOF1,CNN1	1106,-17924
chr7:65575196-65575585	chr7	+	65575319	65575549	True	NR_024548,NM_001040647,NM_014478,NM_001040648,NM_001142414,NM_000181	chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,+,-	CRCP,CRCP,CRCP,CRCP,CRCP,GUSB	4255,4255,4255,4255,4255,-128018
chr16:57490923-57491150	chr16	+	57490979	57491129	True	NM_020313,NM_020312,NM_032940	chr16,chr16,chr16	-,+,+	CIAPIN1,COQ9,POLR2C	-9610,-9701,5421
chr11:65657515-65657878	chr11	+	65657516	65657926	True	NM_198897,NM_004214,NM_006848	chr11,chr11,chr11	-,-,+	FIBP,FIBP,CCDC85B	-1506,-1506,-52
chrX:85282514-85283058	chrX	+	85282517	85282693	True	NM_001139514,NM_000390	chrX,chrX	+,-	DACH2,CHM	120761,19931
chr16:57673957-57674889	chr16	+	57674160	57674774	True	NM_001145774,NM_033212	chr16,chr16	+,-	GPR56,CCDC102A	-1005,-103683
chr17:40272104-40273037	chr17	+	40272209	40272862	True	NM_024119,NM_021078,NM_033194	chr17,chr17,chr17	-,-,+	DHX58,KAT2A,HSPB9	-7458,570,1893
chr20:33998430-33999698	chr20	+	33998647	33999729	True	NM_018244,NM_199487,NM_007186,NM_001184977	chr20,chr20,chr20,chr20	-,-,+,-	UQCC,UQCC,CEP250,UQCC	266,266,43493,266
chr9:37651242-37651866	chr9	+	37651274	37651890	True	NM_014907,NM_001134485	chr9,chr9	+,-	FRMPD1,TOMM5	-273,-58638
chr7:66096478-66096804	chr7	+	66096571	66096846	True	NM_153033,NM_001167961,NR_002933	chr7,chr7,chr7	+,+,-	KCTD7,KCTD7,LOC493754	-2764,-2764,-53073
chr5:172259475-172260147	chr5	+	172259573	172260165	True	NM_004417,NM_001031711	chr5,chr5	-,+	DUSP1,ERGIC1	-61370,1057
chr1:43032037-43033229	chr1	+	43032051	43033244	True	NM_032257,NM_001080850	chr1,chr1	-,+	ZMYND12,CCDC30	-110113,-31542
chr7:27781384-27782245	chr7	+	27782021	27782085	True	NM_006024,NM_152740,NM_001079864	chr7,chr7,chr7	+,-,+	TAX1BP1,HIBADH,TAX1BP1	-2338,-79401,-2338
chr8:10528949-10529453	chr8	+	10529094	10529296	True	NM_001040032,NM_178857	chr8,chr8	+,-	C8orf74,RP1L1	850,-16477
chr10:14816945-14817314	chr10	+	14816975	14817336	True	NM_031453,NM_016299	chr10,chr10	-,+	FAM107B,HSPA14	-79,62924
chr4:83297014-83298172	chr4	+	83297033	83297965	True	NM_001003810,NM_031369,NM_021204,NM_002138,NM_031370	chr4,chr4,chr4,chr4,chr4	-,-,+,-,-	HNRNPD,HNRNPD,ENOPH1,HNRNPD,HNRNPD	-1884,-1884,53760,-1884,-1884
chr17:18085484-18085930	chr17	+	18085592	18085908	True	NM_002018,NM_017758	chr17,chr17	-,+	FLII,ALKBH5	76197,958
chr20:36150110-36151114	chr20	+	36150136	36150888	True	NM_005386,NM_001167821,NM_001167820,NM_001167823,NM_001167822,NM_006698,NM_181689	chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,-,-,-,-,-,+	NNAT,BLCAP,BLCAP,BLCAP,BLCAP,BLCAP,NNAT	-587,5296,5495,2115,5245,5495,-587
chr14:55880805-55881311	chr14	+	55880805	55881358	True	NM_014924,NM_152231	chr14,chr14	-,+	ATG14,FBXO34	-2229,-141991
chr8:101087154-101088940	chr8	+	101087334	101088858	True	NM_015668,NM_005034	chr8,chr8	-,+	RGS22,POLR2K	29536,73980
chr11:60988100-60988609	chr11	+	60988348	60988658	True	NM_017966,NM_001079808	chr11,chr11	-,+	VPS37C,PGA4	-59432,1162
chr11:60988100-60988609	chr11	+	60969861	60969913	False	NM_001079807,NM_017966	chr11,chr11	+,-	PGA3,VPS37C	1070,-40945
chr11:60988100-60988609	chr11	+	61007432	61007484	False	NM_014224,NM_152718	chr11,chr11	+,-	PGA5,VWCE	1159,55354
chr20:234768-235515	chr20	+	234981	235409	True	NM_207469,NM_153269	chr20,chr20	+,-	DEFB132,C20orf96	2967,36032
chr14:45553520-45553767	chr14	+	45553556	45553739	True	NM_017922,NM_002013	chr14,chr14	+,-	PRPF39,FKBP3	-305,50043
chr4:2792625-2793123	chr4	+	2792642	2792970	True	NM_001122681,NM_024309	chr4,chr4	+,-	SH3BP2,TNIP2	1779,-34539
chr17:67420274-67420641	chr17	+	67420287	67420683	True	NM_172232,NM_002758	chr17,chr17	-,+	ABCA5,MAP2K6	-96964,-9508
chrX:103357562-103357953	chrX	+	103357629	103357948	True	NM_001143978,NR_031657,NR_026694	chrX,chrX,chrX	+,-,+	ZCCHC18,MIR1256,ZCCHC18	-573,-12257,-573
chr1:160760526-160761185	chr1	+	160760544	160761002	True	NM_002348,NM_001166663,NM_001033667	chr1,chr1,chr1	+,-,+	LY9,CD244,LY9	4925,71749,4925
chr1:145522268-145522600	chr1	+	145522448	145522600	True	NR_002328,NM_003846,NM_001184795,NM_003637	chr1,chr1,chr1,chr1	-,+,+,+	GNRHR2,PEX11B,PEX11B,ITGA10	-6372,-6342,-5947,2389
chr5:180075006-180075828	chr5	+	180075099	180075508	True	NM_002020,NM_182925,NM_015455	chr5,chr5,chr5	-,-,+	FLT4,FLT4,CNOT6	1167,1167,-153733
chr11:67889765-67890096	chr11	+	67889816	67889919	True	NM_001277,NM_212469,NM_006053	chr11,chr11,chr11	-,-,+	CHKA,CHKA,TCIRG1	-958,-958,-79420
chr21:43921744-43922467	chr21	+	43921853	43922465	True	NM_080860,NM_018964	chr21,chr21	-,+	RSPH1,SLC37A1	-5452,-2169
chr4:69087972-69089412	chr4	+	69088130	69089430	True	NR_015446,NM_001129907	chr4,chr4	+,-	FTLP10,TMPRSS11BNL	-40181,-4332
chr4:159592859-159593092	chr4	+	159592957	159593141	True	NM_001008393,NM_004453	chr4,chr4	-,+	C4orf46,ETFDH	111,135
chr6:133004205-133004417	chr6	+	133004322	133004466	True	NM_175067,NM_004666	chr6,chr6	+,-	TAAR6,VNN1	-112913,30778
chr9:97093054-97094570	chr9	+	97093255	97094209	True	NM_017561,NR_033937	chr9,chr9	-,+	FAM22F,LOC100132077	-2329,548
chr9:97093054-97094570	chr9	-	99688457	99688507	False	NM_001170741,NM_001045477,NM_001001662	chr9,chr9,chr9	+,+,-	FAM22G,FAM22G,ZNF782	2778,2778,-72068
chr11:128734072-128734752	chr11	+	128734380	128734782	True	NM_153765,NM_153764,NM_153767,NM_153766,NM_000890	chr11,chr11,chr11,chr11,chr11	-,-,-,-,+	KCNJ1,KCNJ1,KCNJ1,KCNJ1,KCNJ5	2536,2536,2536,2536,26530
chr19:38810578-38810795	chr19	+	38810599	38810755	True	NM_001145462,NM_001145461,NM_001039671,NM_001145463,NM_001039673,NM_001039672,NM_004823	chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,+	YIF1B,YIF1B,YIF1B,YIF1B,YIF1B,YIF1B,KCNK6	-4154,-4154,-4154,-3993,-3993,-3993,-166
chr11:107798124-107798911	chr11	+	107798191	107798936	True	NM_017515,NM_017516	chr11,chr11	-,+	SLC35F2,RAB39	-68277,340
chr5:34839639-34840087	chr5	+	34839641	34839986	True	NM_144725,NR_026591	chr5,chr5	+,-	TTC23L,RAD1	-423,75802
chr10:72973862-72974662	chr10	+	72974020	72974706	True	NM_000281,NM_170744	chr10,chr10	-,+	PCBD1,UNC5B	-325479,-1773
chr20:37377427-37379362	chr20	+	37377579	37379019	True	NR_027241,NM_024855	chr20,chr20	-,+	LOC388796,ACTR5	-313561,-533
chr10:81316277-81316523	chr10	+	81316301	81316563	True	NM_001099692,NM_001098668	chr10,chr10	+,-	EIF5AL1,SFTPA2	-43995,3650
chr10:81316277-81316523	chr10	+	81354392	81354456	False	NM_001093770,NM_001098668	chr10,chr10	+,-	SFTPA1,SFTPA2	16238,-34229
chr8:37411026-37411346	chr8	+	37411031	37411395	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	141905,194219
chr8:105600992-105601232	chr8	+	105601063	105601145	True	NM_001135703,NM_013437,NM_030788	chr8,chr8,chr8	-,-,+	LRP12,LRP12,TM7SF4	157,157,-249060
chr17:56563580-56564480	chr17	+	56563820	56564261	True	NM_001080439,NM_002876	chr17,chr17	-,+	HSF5,RAD51C	1553,205701
chrY:9525881-9527220	chrY	+	9525901	9527213	True	NR_001533,NR_003591,NR_001534	chrY,chrY,chrY	+,+,-	TTTY8,TTTY8B,TTTY7	1495,1495,25708
chrY:9525881-9527220	chrY	-	6343166	6344478	False	NR_001533,NR_003591,NR_003592	chrY,chrY,chrY	-,-,+	TTTY8,TTTY8B,TTTY7B	-1495,-1495,-25708
chr2:113824827-113825145	chr2	+	113824842	113825192	True	NM_032556,NM_173178,NM_173161,NM_173170,NM_012275	chr2,chr2,chr2,chr2,chr2	+,-,+,+,+	IL1F10,IL1F8,IL1F10,IL1F5,IL1F5	4702,-14402,354,-8681,-8211
chr6:7726470-7726723	chr6	+	7726477	7726651	True	NM_001145549,NM_001718	chr6,chr6	-,+	TXNDC5,BMP6	183709,359
chr2:242090209-242090429	chr2	+	242090320	242090485	True	NM_015148,NM_002712	chr2,chr2	-,+	PASK,PPP1R7	-1442,-469
chr14:64014514-64015172	chr14	+	64014717	64015045	True	NM_006246,NM_015180	chr14,chr14	-,+	PPP2R5E,SYNE2	-4638,304637
chr21:34698668-34699978	chr21	+	34698824	34699966	True	NM_000629,NM_006134	chr21,chr21	+,-	IFNAR1,TMEM50B	-1663,152374
chr12:68945366-68947311	chr12	+	68945386	68946418	True	NM_001010942,NR_033335	chr12,chr12	+,-	RAP1B,SNORA70G	58233,74799
chr19:10678013-10678941	chr19	+	10678154	10678922	True	NM_023008,NM_079421,NR_031603,NM_001800	chr19,chr19,chr19,chr19	-,-,+,-	KRI1,CDKN2D,MIR1238,CDKN2D	-1452,783,-15407,759
chr8:124218777-124219130	chr8	+	124218876	124219008	True	NR_024479,NM_207006	chr8,chr8	-,+	LOC100131726,FAM83A	-3893,-24175
chr12:66565356-66567229	chr12	+	66565390	66566941	True	NM_016056,NM_001142523	chr12,chr12	-,+	TMBIM4,IRAK3	-1583,16036
chr17:41423362-41423942	chr17	+	41423826	41423938	True	NR_027412,NM_001661	chr17,chr17	-,+	LOC100130581,ARL4D	42378,52414
chr6:27338863-27340213	chr6	+	27339092	27340203	True	NM_001076781,NR_024553,NR_002722	chr6,chr6,chr6	+,-,-	ZNF391,ZNF204P,ZNF204P	16320,3000,192
chr6:11235959-11236172	chr6	+	11235981	11236217	True	NM_001135575,NM_182966,NM_006403	chr6,chr6,chr6	+,-,-	LOC221710,NEDD9,NEDD9	-141766,-3066,-3066
chr19:49197664-49198620	chr19	+	49197869	49198089	True	NM_145807,NM_001097638,NM_000511	chr19,chr19,chr19	-,+,+	NTN5,FUT2,FUT2	-21605,1138,1138
chr16:30936207-30936572	chr16	+	30936242	30936616	True	NM_001099784,NR_024348	chr16,chr16	+,-	FBXL19,FBXL19-AS1	-397,-1652
chrX:106293798-106294704	chrX	+	106293866	106294384	True	NM_020384,NM_024657	chrX,chrX	+,-	CLDN2,MORC4	-130311,-50392
chr8:23391280-23392164	chr8	+	23391363	23392059	True	NM_016612,NM_001128930	chr8,chr8	+,-	SLC25A37,ENTPD4	-5051,-76119
chr7:128862131-128863022	chr7	+	128862184	128862772	True	NM_001130720,NM_015328,NR_034053	chr7,chr7,chr7	+,+,-	AHCYL2,AHCYL2,TNPO3	2082,2082,-166957
chr12:48118962-48120853	chr12	+	48118983	48120435	True	NM_001172439,NM_006025,NM_001172440,NM_017842	chr12,chr12,chr12,chr12	-,-,-,+	ENDOU,ENDOU,ENDOU,SLC48A1	-64,-64,-64,46531
chr10:77161675-77161900	chr10	+	77161721	77161940	True	NM_032772,NR_024422,NR_024421	chr10,chr10,chr10	-,+,+	ZNF503,NCRNA00245,NCRNA00245	-208,1573,-486
chr20:19872951-19874435	chr20	+	19873408	19874180	True	NM_016652,NM_018993	chr20,chr20	-,+	CRNKL1,RIN2	162562,-3249
chr17:73994340-73995884	chr17	+	73994600	73995906	True	NM_001258,NM_007292	chr17,chr17	+,-	CDK3,ACOX1	1080,-19085
chr3:50228869-50230024	chr3	+	50229012	50230062	True	NM_000172,NM_006764,NM_144499	chr3,chr3,chr3	+,-,+	GNAT1,IFRD2,GNAT1	-20,100014,-20
chr4:83353951-83355721	chr4	+	83354066	83355468	True	NR_003249,NM_031372,NM_021204	chr4,chr4,chr4	-,-,+	HNRPDL,HNRPDL,ENOPH1	-2688,-2688,-2393
chr17:7313434-7314454	chr17	+	7313434	7314194	True	NM_020795,NR_037719,NM_199339,NM_152766	chr17,chr17,chr17,chr17	+,-,+,-	NLGN2,C17orf61-PLSCR3,SPEM1,C17orf61	-1983,-5984,9484,-5984
chr3:40547051-40547514	chr3	+	40547104	40547323	True	NM_175888,NR_033965,NR_024114	chr3,chr3,chr3	+,-,+	ZNF620,FLJ33065,ZNF620	206,-195915,206
chr11:76994242-76996041	chr11	+	76994312	76996063	True	NM_182833,NM_001127180	chr11,chr11	-,+	GDPD4,MYO7A	2450,-155047
chr14:91718009-91719621	chr14	+	91718146	91719645	True	NM_001177676,NR_003709,NM_003485	chr14,chr14,chr14	-,+,-	GPR68,SNORA11B,GPR68	-7294,-125439,629
chr19:50848089-50849848	chr19	+	50848155	50849716	True	NM_007121,NR_002798	chr19,chr19	+,-	NR1H2,NAPSB	29968,-150
chr2:74733424-74733904	chr2	+	74733751	74733925	True	NR_024606,NM_001009812,NM_032673,NM_016170	chr2,chr2,chr2,chr2	+,-,-,+	LOC151534,LBX2,PCGF1,TLX2	-4058,-3308,946,7670
chr17:53621876-53622453	chr17	+	53622185	53622398	True	NM_021213,NM_012329	chr17,chr17	+,-	PCTP,MMD	205941,-122844
chr16:11352126-11352442	chr16	+	11352148	11352236	True	NM_003745,NM_152308	chr16,chr16	-,+	SOCS1,C16orf75	-2109,87074
chr14:48142037-48142588	chr14	+	48142040	48142600	True	NR_037792,NM_001113498	chr14,chr14	+,-	LRR1,MDGA2	1922814,1607
chr7:142550448-142551776	chr7	+	142550687	142551709	True	NM_004445,NM_018646	chr7,chr7	+,-	EPHB6,TRPV6	1082,31828
chr16:2800685-2800991	chr16	+	2800802	2801040	True	NM_016333,NR_027274,NR_027275	chr16,chr16,chr16	+,-,-	SRRM2,LOC100128788,LOC100128788	1289,-6004,1611
chr4:139934876-139936302	chr4	+	139935056	139936271	True	NM_006874,NM_012118	chr4,chr4	-,+	ELF2,CCRN4L	69426,671
chrX:18463010-18463288	chrX	+	18463013	18463172	True	NM_001037343,NR_033717	chrX,chrX	+,-	CDKL5,SCML2	-2720,-90169
chr19:36053051-36053430	chr19	+	36053051	36053423	True	NM_000704,NM_032635	chr19,chr19	-,+	ATP4A,TMEM147	1187,-16557
chr4:56447192-56448945	chr4	+	56447554	56448709	True	NM_152401,NM_018475	chr4,chr4	-,+	PDCL2,TMEM165	9731,-185522
chr11:66036003-66036228	chr11	+	66036002	66036232	True	NM_030981,NM_020470,NM_182553	chr11,chr11,chr11	+,-,+	RAB1B,YIF1A,CNIH2	3,20456,9463
chr6:32552263-32552521	chr6	+	32552510	32552570	True	NM_002124,NM_002122	chr6,chr6	-,+	HLA-DRB1,HLA-DQA1	5042,52612
chr12:52801850-52803064	chr12	+	52802061	52802761	True	NM_002284,NM_033033	chr12,chr12	+,-	KRT86,KRT82	-106463,-1885
chrX:117858882-117859251	chrX	+	117858899	117859275	True	NM_001560,NM_020721	chrX,chrX	+,-	IL13RA1,KIAA1210	2283,425323
chr1:27224187-27224899	chr1	+	27224248	27224787	True	NM_018066,NM_022078,NM_006600	chr1,chr1,chr1	-,-,+	GPN2,GPATCH3,NUDC	-7379,2226,23436
chr2:37189944-37190820	chr2	+	37190010	37190569	True	NM_174931,NM_003162	chr2,chr2	+,-	CCDC75,STRN	121024,3099
chr21:45993779-45994280	chr21	+	45994096	45994186	True	NM_198694,NM_198687	chr21,chr21	-,+	KRTAP10-5,KRTAP10-4	6345,-541
chr21:45993779-45994280	chr21	-	46011814	46011886	False	NM_198689,NM_198688	chr21,chr21	+,-	KRTAP10-7,KRTAP10-6	8610,550
chr21:45993779-45994280	chr21	+	46020997	46021087	False	NM_198689,NM_198688	chr21,chr21	+,-	KRTAP10-7,KRTAP10-6	-551,-8611
chr8:92304077-92304456	chr8	+	92304077	92304205	True	NM_018710,NM_052832	chr8,chr8	-,+	TMEM55A,SLC26A7	-250874,-42619
chr4:9783686-9783963	chr4	+	9783869	9783937	True	NR_031688,NM_000798	chr4,chr4	-,+	MIR548I2,DRD5	-225932,-662
chr12:8272884-8274841	chr12	+	8272925	8274708	True	NM_016184,NM_194450,NR_036440,NM_194447,NM_194448	chr12,chr12,chr12,chr12,chr12	+,+,-,+,+	CLEC4A,CLEC4A,POU5F1P3,CLEC4A,CLEC4A	1519,1519,12790,1519,1519
chr12:7468061-7468274	chr12	+	7468236	7468325	True	NM_174941,NM_001080454	chr12,chr12	-,+	CD163L1,ACSM4	128481,-11371
chr9:133317979-133319385	chr9	+	133318137	133319221	True	NM_000050,NR_027440,NM_054012	chr9,chr9,chr9	+,-,+	ASS1,LOC100272217,ASS1	872,135716,872
chrX:24378170-24378942	chrX	+	24378309	24378910	True	NM_001136233,NM_001136234	chrX,chrX	-,+	FAM48B2,FAM48B1	-46877,1967
chr14:21756764-21757588	chr14	+	21756999	21757193	True	NM_020366,NM_031314	chr14,chr14	+,-	RPGRIP1,HNRNPC	-920,-19361
chr8:90802581-90803207	chr8	+	90802736	90803092	True	NM_002485,NM_003821	chr8,chr8	-,+	NBN,RIPK2	193859,-32819
chr20:37215835-37216539	chr20	+	37215870	37216336	True	NM_001018082,NR_027241	chr20,chr20	+,-	ADIG,LOC388796	-6083,-151852
chr5:98265908-98266574	chr5	+	98265963	98266596	True	NM_001270,NR_036530	chr5,chr5	-,+	CHD1,LOC100289230	-3725,-1183
chr14:71370057-71370632	chr14	+	71370221	71370677	True	NM_014982,NM_033141	chr14,chr14	+,-	PCNX,MAP3K9	3444,-94333
chr7:131236618-131236908	chr7	+	131236705	131236875	True	NM_001018111,NM_005397,NM_013255	chr7,chr7,chr7	-,-,+	PODXL,PODXL,MKLN1	4551,4551,-224161
chr3:5161092-5161507	chr3	+	5161354	5161427	True	NR_037903,NM_018184	chr3,chr3	-,+	LOC100507582,ARL8B	-213168,2502
chr3:5161092-5161507	chr3	-	5961161	5961234	False	NM_014674,NR_037903	chr3,chr3	+,-	EDEM1,LOC100507582	-731856,-1012975
chr6:10881684-10881923	chr6	+	10881688	10881966	True	NM_004752,NM_001040274	chr6,chr6	-,+	GCM2,SYCP2L	182,5097
chr8:145322220-145322478	chr8	+	145322246	145322474	True	NM_030974,NM_001008271,NM_001080514	chr8,chr8,chr8	-,+,+	SHARPIN,SCXA,SCXB	-163106,-780,-780
chr8:145322220-145322478	chr8	+	145491466	145491560	False	NM_001008271,NM_015201,NM_001080514	chr8,chr8,chr8	+,-,+	SCXA,BOP1,SCXB	-914,23610,-914
chr3:72925515-72927312	chr3	+	72926079	72927204	True	NM_001080393,NM_018130	chr3,chr3	+,-	GXYLT2,SHQ1	10180,-28481
chr4:54447321-54448576	chr4	+	54447326	54448617	True	NM_001126328,NM_030917	chr4,chr4	-,+	LNX1,FIP1L1	9165,-203558
chr1:204462917-204463292	chr1	+	204462945	204463039	True	NM_001204171,NM_002646	chr1,chr1	+,-	MDM4,PIK3C2B	22467,-3471
chr11:67250704-67251033	chr11	+	67250704	67251082	True	NM_003977,NM_025124	chr11,chr11	+,-	AIP,TMEM134	-250,-13973
chr6:168597748-168598735	chr6	+	168598077	168598763	True	NM_030615,NM_024919	chr6,chr6	+,-	KIF25,FRMD1	-179575,-118238
chr8:6787342-6787785	chr8	+	6787415	6787772	True	NM_018361,NM_001926,NM_001925	chr8,chr8,chr8	+,-,-	AGPAT5,DEFA6,DEFA4	-221588,-3817,8065
chr10:101419742-101420504	chr10	+	101419836	101420402	True	NM_020354,NM_031212	chr10,chr10	+,-	ENTPD7,SLC25A28	-634,-39615
chr3:169540577-169541226	chr3	+	169540603	169541030	True	NM_001080460,NM_001172780	chr3,chr3	+,-	LRRIQ4,LRRC34	-944,-10029
chr15:69097895-69098696	chr15	+	69097929	69098593	True	NR_031680,NR_026808,NR_036197	chr15,chr15,chr15	+,-,-	MIR548H4,C15orf28,MIR4312	17709,897,-3665
chr3:129412163-129412418	chr3	+	129412163	129412240	True	NM_153833,NR_033361	chr3,chr3	+,-	H1FOO,TMCC1	-150158,-4588
chr7:73702234-73703730	chr7	+	73702471	73703481	True	NM_181471,NM_003388,NM_032421	chr7,chr7,chr7	-,+,+	RFC2,CLIP2,CLIP2	-33733,323,323
chr1:244811339-244812156	chr1	+	244811364	244811940	True	NM_001126,NM_016076	chr1,chr1	-,+	ADSS,PPPDE1	-195928,4411
chr1:205652656-205653408	chr1	+	205652697	205652984	True	NM_033102,NM_181644	chr1,chr1	-,+	SLC45A3,MFSD4	-3067,-114636
chr16:21164855-21165580	chr16	+	21164903	21165406	True	NM_020422,NM_017539	chr16,chr16	+,-	TMEM159,DNAH3	4505,5406
chr22:40263200-40264132	chr22	+	40263200	40264168	True	NM_004810,NM_152512	chr22,chr22	+,-	GRAP2,ENTHD1	32917,25676
chr17:17186331-17186874	chr17	+	17186449	17186871	True	NM_003653,NM_001199125,NM_020201	chr17,chr17,chr17	-,-,+	COPS3,COPS3,NT5M	-1832,-2437,19808
chr4:89413614-89414246	chr4	+	89414025	89414277	True	NM_016323,NM_001042616	chr4,chr4	+,-	HERC5,PIGY	-35814,30728
chr14:21947661-21949103	chr14	+	21947897	21948978	True	NM_032846,NM_001163380,NM_014828,NR_028074	chr14,chr14,chr14,chr14	-,-,+,-	RAB2B,RAB2B,TOX4,RAB2B	-2765,-3065,-2624,-2765
chr13:51916403-51916624	chr13	+	51916473	51916626	True	NM_001039937,NM_001101320	chr13,chr13	-,+	INTS6,SERPINE3	110700,-1357
chr1:86047483-86047793	chr1	+	86047522	86047836	True	NM_001554,NM_001134445	chr1,chr1	+,-	CYR61,DDAH1	-1135,-3476
chr2:96804449-96804704	chr2	+	96804457	96804675	True	NM_004418,NM_001037228,NM_001002036	chr2,chr2,chr2	-,+,-	DUSP2,LOC285033,ASTL	6554,101301,-282
chr11:67037775-67038412	chr11	+	67037927	67038431	True	NM_001619,NM_021173	chr11,chr11	+,-	ADRBK1,POLD4	-4073,82671
chr4:1686658-1687187	chr4	+	1686889	1687224	True	NM_001013622,NM_001174070,NM_006342	chr4,chr4,chr4	-,-,+	FAM53A,FAM53A,TACC3	-1171,-901,36041
chr1:55181751-55183300	chr1	+	55181815	55183331	True	NM_004623,NM_152268	chr1,chr1	+,-	TTC4,PARS2	-372,46945
chr15:78391037-78392759	chr15	+	78391146	78392536	True	NM_001101404,NM_144572	chr15,chr15	+,-	SH2D7,TBC1D2B	-6270,-21152
chr5:174150973-174151505	chr5	+	174151007	174151371	True	NM_002449,NM_000794	chr5,chr5	+,-	MSX2,DRD1	203,719844
chr6:151186801-151187012	chr6	+	151186933	151186993	True	NM_020861,NM_015440	chr6,chr6	-,+	ZBTB2,MTHFD1L	525734,-293
chr12:133705301-133705807	chr12	+	133705505	133705768	True	NM_015394,NM_001191054	chr12,chr12	+,-	ZNF10,LOC647589	1445,106706
chr2:241810227-241810484	chr2	+	241810235	241810449	True	NM_024861,NM_000030	chr2,chr2	-,+	C2orf54,AGXT	21053,-2124
chr2:75060517-75060780	chr2	+	75060690	75060828	True	NM_138804,NM_000189	chr2,chr2	-,+	C2orf65,HK2	-185526,-959
chr12:53532936-53534619	chr12	+	53533265	53533978	True	NM_003578,NM_015989	chr12,chr12	+,-	SOAT2,CSAD	-36054,40509
chr2:15682187-15683341	chr2	+	15682971	15683359	True	NM_004939,NM_015909	chr2,chr2	+,-	DDX1,NBAS	48410,18145
chr12:121341102-121341312	chr12	+	121341141	121341229	True	NM_139015,NM_000545	chr12,chr12	-,+	SPPL3,HNF1A	972,75319
chr22:22338627-22339536	chr22	+	22338793	22339423	True	NM_007128,NM_003935	chr22,chr22	+,-	VPREB1,TOP3B	259776,-1646
chrX:7899474-7899888	chrX	+	7899565	7899938	True	NM_001142389,NM_001172672,NM_013452,NM_004650	chrX,chrX,chrX,chrX	-,-,+,-	PNPLA4,PNPLA4,VCX,PNPLA4	-3785,-3785,-89317,-4090
chr19:44529475-44529728	chr19	+	44529482	44529760	True	NM_001129996,NM_013360,NR_033341	chr19,chr19,chr19	+,+,-	ZNF222,ZNF222,LOC100379224	-47,-47,87626
chr9:140066468-140067151	chr9	+	140066497	140067145	True	NM_001013653,NR_037416,NM_003731	chr9,chr9,chr9	-,-,+	LRRC26,MIR3621,SSNA1	-2006,-2775,15908
chr8:87081817-87082362	chr8	+	87081999	87082387	True	NM_152565,NM_033126	chr8,chr8	+,-	ATP6V0D2,PSKH2	28751,-148
chr6:157100979-157101377	chr6	+	157100996	157101394	True	NM_020732,NM_018452,NM_017519	chr6,chr6,chr6	+,-,+	ARID1B,C6orf35,ARID1B	-1983,643909,-1983
chr5:176730293-176730493	chr5	+	176730391	176730459	True	NM_130781,NM_001142935,NM_013237,NM_031300,NM_001031677	chr5,chr5,chr5,chr5,chr5	-,-,+,-,-	RAB24,MXD3,PRELID1,MXD3,RAB24	335,8883,375,8883,335
chr1:202445096-202445991	chr1	+	202445404	202445996	True	NM_014176,NM_032104	chr1,chr1	-,+	UBE2T,PPP1R12B	-134310,-13600
chr5:710338-712032	chr5	+	710522	711938	True	NM_018140,NM_007030	chr5,chr5	+,-	CEP72,TPPP	-98176,-17012
chr2:190043546-190044056	chr2	+	190043555	190044073	True	NM_000393,NR_037401	chr2,chr2	-,+	COL5A2,MIR3606	582,-183251
chr7:99768026-99768227	chr7	+	99768082	99768234	True	NM_024637,NM_152742,NM_012447	chr7,chr7,chr7	-,-,+	GAL3ST4,GPC2,STAG3	-1709,6806,7303
chr6:168591881-168593129	chr6	+	168591929	168593143	True	NM_030615,NM_024919	chr6,chr6	+,-	KIF25,FRMD1	-173433,-112090
chr3:50710908-50711661	chr3	+	50710917	50711649	True	NM_145071,NM_004947	chr3,chr3	-,+	CISH,DOCK3	-61655,1022
chr15:66796646-66796915	chr15	+	66796646	66796902	True	NM_006049,NM_000968,NR_003105,NR_002440,NR_002441,NR_002442,NR_002443,NM_017975	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,+,-,-,-,-,+	SNAPC5,RPL4,ZWILCH,SNORD16,SNORD18A,SNORD18B,SNORD18C,ZWILCH	-6500,332,528,-1398,-994,-2217,-2990,528
chr19:51295254-51295736	chr19	+	51295266	51295704	True	NR_003068,NM_033068,NR_003067	chr19,chr19,chr19	-,+,-	SNORD88B,ACPT,SNORD88A	6728,-1645,7138
chr11:2951117-2951483	chr11	+	2951245	2951391	True	NM_002555,NM_003311	chr11,chr11	+,-	SLC22A18,PHLDA2	-27784,-595
chr7:107234248-107235240	chr7	+	107234250	107234941	True	NM_001008405,NM_001161520	chr7,chr7	+,-	BCAP29,COG5	-13097,-29291
chr19:44583716-44584469	chr19	+	44584185	44584459	True	NM_001037813,NR_033341	chr19,chr19	+,-	ZNF284,LOC100379224	-7949,32935
chr15:65281174-65281469	chr15	+	65281340	65281492	True	NM_001127890,NM_178859,NM_001127889,NM_016630	chr15,chr15,chr15,chr15	-,+,-,-	SPG21,OSTBETA,SPG21,SPG21	809,56215,370,809
chr9:135937700-135938258	chr9	+	135938043	135938281	True	NM_001807,NM_006266	chr9,chr9	+,-	CEL,RALGDS	-734,58330
chr9:135937700-135938258	chr9	+	135958611	135958847	False	NR_001275,NM_006266	chr9,chr9	+,-	CELP,RALGDS	-744,37764
chr15:74758487-74759373	chr15	+	74758638	74759116	True	NM_006465,NM_032907,NM_201265	chr15,chr15,chr15	+,-,-	ARID3B,UBL7,UBL7	74431,-5128,-5109
chr1:35659803-35660570	chr1	+	35660063	35660579	True	NM_005066,NM_005095	chr1,chr1	-,+	SFPQ,ZMYM4	-1320,73988
chr19:41036156-41036392	chr19	+	41036186	41036246	True	NM_025213,NM_000713	chr19,chr19	+,-	SPTBN4,BLVRB	148,-64461
chr11:93268381-93270286	chr11	+	93268503	93270064	True	NM_033395,NM_020179	chr11,chr11	+,-	KIAA1731,C11orf75	124751,6533
chr5:148407035-148407350	chr5	+	148407129	148407389	True	NM_024577,NM_014945	chr5,chr5	-,+	SH3TC2,ABLIM3	35398,113664
chr4:495845-497281	chr4	+	495933	497117	True	NM_001127178,NM_133474,NM_017733	chr4,chr4,chr4	+,-,+	PIGG,ZNF721,PIGG	-2995,-2491,-2995
chr20:13203732-13204579	chr20	+	13204175	13204583	True	NM_080826,NM_017714	chr20,chr20	+,-	ISM1,TASP1	-1818,415055
chr9:140483934-140484296	chr9	+	140483966	140484290	True	NM_152285,NM_138462	chr9,chr9	+,-	ARRDC1,ZMYND19	15805,697
chr7:66766529-66767244	chr7	+	66766540	66767170	True	NM_022906,NR_022007	chr7,chr7	+,-	STAG3L4,PMS2P4	445,286
chr1:168206314-168207718	chr1	+	168206477	168207458	True	NR_026844,NM_199344	chr1,chr1	-,+	ANKRD36BP1,SFT2D2	9263,-11273
chr5:10365074-10365503	chr5	+	10365220	10365336	True	NM_005885,NM_138809	chr5,chr5	+,-	MARCH6,CMBL	-11450,-57052
chr9:138554785-138555422	chr9	+	138554835	138555277	True	NM_001001676,NM_182974	chr9,chr9	+,-	LCN9,GLT6D1	-18,-23449
chr1:145292718-145293418	chr1	+	145292718	145293180	True	NM_032305,NM_001039703	chr1,chr1	-,+	POLR3GL,NBPF10	177257,190
chr10:99399195-99400091	chr10	+	99399561	99400104	True	NM_018425,NM_178832,NM_001098831	chr10,chr10,chr10	+,-,-	PI4K2A,MORN4,MORN4	338,-6217,-5648
chr2:112653411-112654242	chr2	+	112653600	112654276	True	NM_022662,NM_006343	chr2,chr2	-,+	ANAPC1,MERTK	-11859,1914
chr16:29365581-29366366	chr16	+	29365916	29365993	True	NR_002939,NM_001031827	chr16,chr16	+,-	RUNDC2C,BOLA2	-63427,100343
chr16:29365581-29366366	chr16	+	21386775	21386852	False	NR_026675,NM_130464	chr16,chr16	+,-	NCRNA00169,NPIPL3	-74657,49857
chr19:48431686-48432074	chr19	+	48432020	48432092	True	NR_024219,NR_024220,NR_024223,NR_024224,NR_024225,NR_024226,NR_024227,NR_024228,NR_024229,NR_024215,NR_024214,NR_024217,NM_003167,NR_004436,NR_004435,NR_024242	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,+,+,+,+,+,+,+,-,+,+,+	SNAR-C5,SNAR-C1,SNAR-A5,SNAR-A7,SNAR-A11,SNAR-A9,SNAR-A6,SNAR-A8,SNAR-A10,SNAR-A4,SNAR-A3,SNAR-C2,SULT2A1,SNAR-A2,SNAR-A1,SNAR-A14	0,0,-5035,-5035,-5035,-5035,-5035,-5035,-5035,-5035,-5035,0,-42366,5345,5345,-5035
chr19:48431686-48432074	chr19	+	48416273	48416325	False	NR_024219,NR_024220,NR_024217,NR_024216,NM_003167,NR_004437,NR_004436,NR_004435	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,-,+,+,+	SNAR-C5,SNAR-C1,SNAR-C2,SNAR-A13,SULT2A1,SNAR-A12,SNAR-A2,SNAR-A1	-16,-16,-16,-5389,-26619,-5389,5360,5360
chr19:48431686-48432074	chr19	+	48442763	48442815	False	NR_024218,NR_024216,NR_004437,NM_001128326,NR_004435,NR_004436	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,-,+,+	SNAR-C4,SNAR-A13,SNAR-A12,BSPH1,SNAR-A1,SNAR-A2	-16,5363,5363,52662,-5376,-5376
chr19:48431686-48432074	chr19	+	48458904	48458956	False	NR_024219,NR_024220,NM_001128326,NR_024217,NR_024221	chr19,chr19,chr19,chr19,chr19	+,+,-,+,+	SNAR-C5,SNAR-C1,BSPH1,SNAR-C2,SNAR-C3	-16,-16,36521,-16,-5402
chr2:110654034-110654963	chr2	+	110654227	110654858	True	NR_036225,NR_038099,NR_027467,NM_001205288,NR_027145,NM_033514	chr2,chr2,chr2,chr2,chr2,chr2	-,+,+,+,+,+	MIR4267,LOC100288695,LIMS3,LOC100288695,LIMS3-LOC440895,LIMS3	172824,1150,1150,1150,1150,1150
chr2:110654034-110654963	chr2	+	109269606	109269964	False	NM_001193485,NM_022336	chr2,chr2	+,-	LIMS1,EDAR	1302,335914
chr2:110654034-110654963	chr2	-	111231802	111232433	False	NR_037626,NR_038099,NR_027467,NM_001205288,NR_027145,NM_033514	chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-	LOC100507334,LOC100288695,LIMS3,LOC100288695,LIMS3-LOC440895,LIMS3	-228651,-1150,-1150,-1150,-1150,-1150
chr2:87140869-87141104	chr2	+	87140872	87141080	True	NM_001078170,NM_004931,NM_001024457	chr2,chr2,chr2	+,-,+	RGPD2,CD8B,RGPD1	12,-51825,3657
chr2:87140869-87141104	chr2	+	108443364	108443419	False	NM_182588,NR_024439	chr2,chr2	+,-	RGPD4,LOC729121	-32,-781
chr2:87140869-87141104	chr2	+	87169259	87169467	False	NM_001032392,NM_001024457	chr2,chr2	-,+	PLGLB1,RGPD1	79552,-24572
chr2:87140869-87141104	chr2	-	88125140	88125348	False	NM_001078170,NM_001032392	chr2,chr2	-,+	RGPD2,PLGLB1	-12,-77581
chr10:90523327-90524170	chr10	+	90523328	90524021	True	NM_001102469,NM_144590	chr10,chr10	+,-	LIPN,ANKRD22	-2223,87770
chr17:79874196-79874693	chr17	+	79874205	79874735	True	NM_016538,NR_015454,NM_002861,NM_001184917,NM_032711,NR_033682,NR_033683,NR_033681,NR_033685	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,-,-,-,-,-,-,-	SIRT7,LOC92659,PCYT2,PCYT2,MAFG,PCYT2,PCYT2,PCYT2,PCYT2	1373,10969,-4865,-4865,6723,-4865,-5128,-4865,-5128
chr7:102035931-102036469	chr7	+	102036030	102036433	True	NM_024653,NM_001146210	chr7,chr7	+,-	PRKRIP1,SPDYE6	370,-39141
chr5:68391292-68391606	chr5	+	68391320	68391615	True	NM_176816,NM_022902,NM_024055	chr5,chr5,chr5	-,+,+	CCDC125,SLC30A5,SLC30A5	224854,-1490,-1554
chr1:67895858-67896071	chr1	+	67895909	67896041	True	NM_001018068,NM_001018069,NM_001559,NM_015640,NM_001018067	chr1,chr1,chr1,chr1,chr1	-,-,+,-,-	SERBP1,SERBP1,IL12RB2,SERBP1,SERBP1	132,132,-122913,132,132
chr1:154154319-154154970	chr1	+	154154519	154154761	True	NM_001043352,NM_001043353,NM_001043351,NM_153649,NM_152263,NM_001127320	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,+	TPM3,TPM3,TPM3,TPM3,TPM3,UBAP2L	1014,1014,1014,1014,9898,37893
chr20:31406795-31407234	chr20	+	31406799	31406915	True	NM_012325,NM_053041	chr20,chr20	+,-	MAPRE1,COMMD7	783,-74985
chr5:71613498-71614475	chr5	+	71613697	71614330	True	NM_015084,NM_024754	chr5,chr5	-,+	MRPS27,PTCD2	1817,1869
chr4:79468390-79468701	chr4	+	79468389	79468470	True	NM_005139,NM_001040202	chr4,chr4	+,-	ANXA3,PAQR3	4271,392171
chr1:202115748-202117558	chr1	+	202115894	202117382	True	NM_138795,NR_002930	chr1,chr1	-,+	ARL8A,PTPRVP	-2028,19796
chr8:87078081-87078519	chr8	+	87078250	87078434	True	NM_152565,NM_033126	chr8,chr8	+,-	ATP6V0D2,PSKH2	32704,3471
chr10:106135192-106136116	chr10	+	106135335	106135734	True	NM_001008723,NM_033397	chr10,chr10	+,-	CCDC147,ITPRIP	-21866,-41672
chr8:39772579-39774058	chr8	+	39772580	39774060	True	NM_001464,NM_002164	chr8,chr8	-,+	ADAM2,IDO1	-76801,-1310
chr11:94133036-94134344	chr11	+	94133160	94134296	True	NM_017704,NM_016540	chr11,chr11	+,-	ANKRD49,GPR83	92856,339
chr4:91226360-91227326	chr4	+	91226448	91226820	True	NM_001146055,NM_207491	chr4,chr4	-,+	SNCA,FAM190A	-467001,-70330
chr4:84371838-84372535	chr4	+	84372070	84372524	True	NM_133636,NM_016067	chr4,chr4	-,+	HELQ,MRPS18C	4553,4593
chr22:51002761-51004382	chr22	+	51002875	51004218	True	NR_021492,NM_001123225,NM_138433	chr22,chr22,chr22	+,-,+	LOC100144603,C22orf41,KLHDC7B	17236,-1547,-16465
chr14:92302287-92302635	chr14	+	92302482	92302630	True	NM_001128595,NM_017437,NM_152332	chr14,chr14,chr14	-,+,-	TC2N,CPSF2,TC2N	269,285667,269
chr1:67774625-67775789	chr1	+	67774812	67775460	True	NM_001018067,NM_001559	chr1,chr1	-,+	SERBP1,IL12RB2	120713,-1832
chr13:109277852-109278875	chr13	+	109277867	109278854	True	NM_001098268,NM_001198950	chr13,chr13	-,+	LIG4,MYO16	-407151,2716
chr13:33756652-33757089	chr13	+	33756838	33757010	True	NM_004795,NM_178007	chr13,chr13	+,-	KL,STARD13	-166319,3256
chr22:30902314-30903672	chr22	+	30902526	30903446	True	NM_001161368,NM_174977,NM_016498	chr22,chr22,chr22	-,-,+	SEC14L4,SEC14L4,MTFP1	-828,-828,-80966
chr17:7196816-7197285	chr17	+	7196948	7197282	True	NM_001042,NM_015982	chr17,chr17	+,-	SLC2A4,YBX2	-11946,644
chr16:50581754-50582034	chr16	+	50581836	50582060	True	NM_001144972,NM_033119	chr16,chr16	-,+	SNX20,NKD1	133254,180
chr8:87516364-87517018	chr8	+	87516363	87517063	True	NM_003909,NM_016033	chr8,chr8	+,-	CPNE3,FAM82B	9592,3996
chr1:19281749-19282075	chr1	+	19281753	19282041	True	NM_001136265,NM_016183	chr1,chr1	-,+	IFFO2,MRTO4	835,296033
chr7:1273690-1273939	chr7	+	1273760	1273864	True	NM_001080461,NM_182491	chr7,chr7	+,-	UNCX,ZFAND2A	-1157,-73905
chr2:229459579-229460953	chr2	+	229459665	229460667	True	NM_178821,NM_030623	chr2,chr2	+,-	WDR69,SPHKAP	-723403,-413304
chr11:63954825-63955194	chr11	+	63954991	63955175	True	NM_006819,NM_014067	chr11,chr11	+,-	STIP1,MACROD1	-1455,-21406
chr11:131123463-131125305	chr11	+	131123523	131124085	True	NM_001048209,NM_014758	chr11,chr11	+,-	NTM,SNX19	116285,-337141
chr17:8128469-8128998	chr17	+	8128476	8128940	True	NR_026951,NM_012393	chr17,chr17	-,+	C17orf44,PFAS	-1115,23655
chrY:14825934-14826680	chrY	+	14826176	14826736	True	NM_004654,NR_033667	chrY,chrY	+,-	USP9Y,GYG2P1	-13080,-292787
chr11:118939720-118940986	chr11	+	118939923	118940848	True	NM_021729,NM_001130991	chr11,chr11	+,-	VPS11,HYOU1	-1481,-11998
chr17:48782329-48784119	chr17	+	48782542	48783953	True	NM_052855,NM_006107	chr17,chr17	-,+	ANKRD40,LUC7L3	1367,12972
chrX:14607647-14609625	chrX	+	14608021	14609272	True	NM_001018113,NM_002063	chrX,chrX	-,+	FANCB,GLRA2	281969,-60652
chr10:15211002-15211742	chr10	+	15211172	15211769	True	NM_183005,NM_004808	chr10,chr10	+,-	RPP38,NMT2	-72041,-477
chr20:21284389-21284591	chr20	+	21284486	21284606	True	NM_012255,NM_033176	chr20,chr20	+,-	XRN2,NKX2-4	-595,93491
chr17:42399674-42400382	chr17	+	42399722	42400226	True	NM_001143780,NM_001144825,NM_016016	chr17,chr17,chr17	-,+,-	SLC25A39,RUNDC3A,SLC25A39	2041,-13846,2041
chr3:122474145-122474458	chr3	+	122474145	122474487	True	NM_024610,NM_032839	chr3,chr3	-,+	HSPBAP1,DIRC2	38213,39413
chr20:62608733-62609195	chr20	+	62608902	62609182	True	NM_080621,NM_012469,NM_020713	chr20,chr20,chr20	-,+,-	SAMD10,PRPF6,ZNF512B	1863,3248,-7684
chr20:38764561-38766235	chr20	+	38764952	38765897	True	NM_003286,NM_005461	chr20,chr20	+,-	TOP1,MAFB	891564,552040
chr11:73666512-73668183	chr11	+	73666900	73667922	True	NM_153614,NM_003355	chr11,chr11	+,-	DNAJB13,UCP2	-5594,26024
chrX:119440111-119441851	chrX	+	119440211	119441811	True	NM_001104545,NM_001104544,NM_001142447,NM_001184742,NM_017938	chrX,chrX,chrX,chrX,chrX	-,-,+,+,-	FAM70A,FAM70A,ATP1B4,ZBTB33,FAM70A	3630,3630,54128,-55654,3630
chr11:67352055-67352293	chr11	+	67352170	67352254	True	NM_000852,NR_033791	chr11,chr11	+,-	GSTP1,DOC2GP	-1155,30931
chr22:29787619-29788088	chr22	+	29787648	29788062	True	NM_001127,NM_145730,NM_001166019,NM_021026	chr22,chr22,chr22,chr22	-,-,-,+	AP1B1,AP1B1,AP1B1,RFPL1	-3076,-3076,-3076,46509
chr7:97880936-97881448	chr7	+	97881048	97881180	True	NM_015395,NM_015379	chr7,chr7	-,+	TECPR1,BRI3	338,29798
chr3:124655790-124656766	chr3	+	124656077	124656797	True	NM_033049,NR_033437	chr3,chr3	-,+	MUC13,UMPS	-2482,-206919
chr15:22553629-22554959	chr15	+	22553806	22554765	True	NR_027407,NR_033735	chr15,chr15	-,+	GOLGA8DP,REREP3	161014,-7304
chr10:7829954-7830362	chr10	+	7830167	7830273	True	NM_005174,NM_012311,NM_001001973	chr10,chr10,chr10	+,-,+	ATP5C1,KIN,ATP5C1	-125,-223,-125
chr1:168696230-168696934	chr1	+	168696438	168696678	True	NR_024160,NM_001937	chr1,chr1	+,-	MGC4473,DPT	59500,1814
chr11:11863429-11863698	chr11	+	11863434	11863684	True	NM_017944,NM_001018057	chr11,chr11	+,-	USP47,DKK3	-515,166552
chr15:53091407-53092135	chr15	+	53091703	53091975	True	NM_004498,NM_002748	chr15,chr15	-,+	ONECUT1,MAPK6	-9494,-780343
chr8:93896466-93897325	chr8	+	93896487	93897356	True	NM_145269,NM_001191036	chr8,chr8	+,-	FAM92A1,C8orf83	815416,80516
chr17:35731522-35731857	chr17	+	35731534	35731815	True	NM_198836,NM_173625	chr17,chr17	-,+	ACACA,C17orf78	-15475,1169
chr7:45017415-45017740	chr7	+	45017461	45017703	True	NR_002952,NR_003697,NM_033054,NR_030770	chr7,chr7,chr7,chr7	-,-,-,+	SNORA9,C7orf40,MYO1G,CCM2	7456,8606,1051,21641
chr2:241757797-241758385	chr2	+	241757855	241758307	True	NM_000030,NM_004321	chr2,chr2	+,-	AGXT,KIF1A	49854,1367
chr13:65529398-65530905	chr13	+	65529399	65530723	True	NR_002171,NM_020403	chr13,chr13	+,-	OR7E156P,PCDH9	-1217889,2273796
chr1:52459238-52460212	chr1	+	52459528	52459932	True	NM_002867,NM_001136497	chr1,chr1	-,+	RAB3B,BTF3L4	-3092,61924
chrX:12152782-12154654	chrX	+	12152856	12154586	True	NM_006125,NM_014728	chrX,chrX	-,+	ARHGAP6,FRMPD4	-469035,1998
chr1:27287562-27287770	chr1	+	27287566	27287710	True	NM_001013642,NM_152365	chr1,chr1	+,-	TRNP1,C1orf172	32484,-665
chr6:43600205-43600477	chr6	+	43600286	43600377	True	NM_014628,NM_001003690,NM_019096	chr6,chr6,chr6	+,+,-	MAD2L1BP,MAD2L1BP,GTPBP2	3199,-3067,-3350
chr10:86087028-86087398	chr10	+	86087041	86087397	True	NM_018999,NM_015613	chr10,chr10	+,-	FAM190B,LRIT1	1012,-85824
chr22:41763780-41764048	chr22	+	41763885	41764097	True	NM_001145398,NM_016272	chr22,chr22	+,-	TEF,TOB2	-544,78980
chr7:140624946-140625997	chr7	+	140624963	140625904	True	NM_001195278,NM_004333	chr7,chr7	+,-	LOC100131199,BRAF	148127,-399
chr1:228353151-228353351	chr1	+	228353153	228353367	True	NM_181465,NM_001010867	chr1,chr1	-,+	MRPL55,IBA57	-56140,61
chr6:144327704-144328404	chr6	+	144327853	144328402	True	NM_002656,NM_001013623,NR_002768,NM_001080953,NM_001080952,NM_006718,NM_001080956,NM_001080954	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,+,-,-,-,-,-,-	PLAGL1,C6orf94,HYMAI,PLAGL1,PLAGL1,PLAGL1,PLAGL1,PLAGL1	1190,-142340,1516,1190,1190,1190,1190,1190
chr6:62667808-62669017	chr6	+	62667961	62668955	True	NM_001190706,NM_152688	chr6,chr6	+,-	MTRNR2L9,KHDRBS2	-384016,327195
chr8:42619763-42620383	chr8	+	42619895	42620305	True	NM_001199279,NM_000749,NM_004198	chr8,chr8,chr8	-,+,-	CHRNA6,CHRNB3,CHRNA6	3674,-67384,3674
chr19:58898723-58900082	chr19	+	58899022	58899788	True	NM_138466,NM_001009,NM_001195135,NM_001129730	chr19,chr19,chr19,chr19	-,+,+,-	ZNF837,RPS5,LOC646862,ZNF837	-6633,-437,7668,-6633
chr14:21866587-21868377	chr14	+	21866807	21868407	True	NR_002916,NM_014828,NR_003029	chr14,chr14,chr14	-,+,-	SNORD8,TOX4,SNORD9	-1247,76927,-6395
chr4:170936863-170937518	chr4	+	170936938	170937402	True	NM_173872,NM_021647	chr4,chr4	+,-	CLCN3,MFAP3L	-395267,10077
chr8:67592246-67592881	chr8	+	67592330	67592785	True	NM_001204173,NM_025054	chr8,chr8	+,-	C8orf44-SGK3,VCPIP1	-12601,-12878
chr1:104696531-104696732	chr1	+	104696572	104696670	True	NM_001008221,NR_033990	chr1,chr1	-,+	AMY1A,LOC100129138	-457499,-80978
chr19:11688667-11689378	chr19	+	11688684	11689311	True	NM_001611,NM_145295,NM_001111036,NM_001111035,NM_001111034	chr19,chr19,chr19,chr19,chr19	-,+,-,-,-	ACP5,ZNF627,ACP5,ACP5,ACP5	-131,18923,540,540,331
chr22:41696048-41697155	chr22	+	41696139	41697079	True	NM_017590,NM_002883	chr22,chr22	+,-	ZC3H7B,RANGAP1	487,-13923
chr17:30466632-30468064	chr17	+	30467130	30467924	True	NM_001033566,NR_002222,NM_018307,NM_001033568	chr17,chr17,chr17,chr17	+,-,+,+	RHOT1,ARGFXP2,RHOT1,RHOT1	1548,10716,1548,1548
chr19:50471332-50472505	chr19	+	50471745	50472336	True	NM_001135163,NM_052884,NR_002825	chr19,chr19,chr19	-,-,+	SIGLEC11,SIGLEC11,SIGLEC16	-7316,-7316,575
chr14:45437214-45437553	chr14	+	45437214	45437414	True	NM_017658,NM_015091	chr14,chr14	-,+	KLHL28,FAM179B	-6035,-5861
chr14:21502426-21504241	chr14	+	21502693	21504145	True	NM_001012264,NM_201536,NM_201537,NM_201535,NM_173846,NM_201541,NM_016250,NM_201540,NM_032572,NM_201538,NM_201539	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	-,-,-,-,+,-,-,-,+,-,-	RNASE13,NDRG2,NDRG2,NDRG2,TPPP2,NDRG2,NDRG2,NDRG2,RNASE7,NDRG2,NDRG2	93,-8758,-8758,-8758,-4399,-9429,-8758,-9429,6239,-9429,-9429
chr12:66567730-66568338	chr12	+	66567882	66568178	True	NM_016056,NM_001142523	chr12,chr12	-,+	TMBIM4,IRAK3	-4075,14799
chr1:226592622-226593126	chr1	+	226592629	226592998	True	NM_001618,NM_001003665	chr1,chr1	-,+	PARP1,C1orf95	2858,143502
chr1:214159045-214159502	chr1	+	214159064	214159537	True	NR_037850,NM_002763	chr1,chr1	-,+	LOC100505832,PROX1	-19456,2322
chr19:42299332-42300066	chr19	+	42299354	42300104	True	NM_173506,NM_001815	chr19,chr19	-,+	LYPD4,CEACAM3	48454,429
chr1:168207773-168209728	chr1	+	168208076	168209775	True	NR_026844,NM_199344	chr1,chr1	-,+	ANKRD36BP1,SFT2D2	6950,-12872
chr22:45145425-45147012	chr22	+	45146419	45146987	True	NM_181335,NM_001198726,NM_001017526,NM_032287	chr22,chr22,chr22,chr22	+,+,+,-	ARHGAP8,ARHGAP8,ARHGAP8,LDOC1L	1450,1450,1450,-252414
chr19:50850629-50851221	chr19	+	50850739	50851067	True	NM_007121,NR_002798	chr19,chr19	+,-	NR1H2,NAPSB	28617,-2734
chr19:12144559-12146165	chr19	+	12144721	12145875	True	NM_001136501,NM_001080411	chr19,chr19	+,-	ZNF844,ZNF433	29670,706
chr1:12225728-12226798	chr1	+	12225936	12226779	True	NM_001066,NM_138346	chr1,chr1	+,-	TNFRSF1B,KIAA2013	280,-239451
chr2:202649411-202650776	chr2	+	202649460	202650813	True	NM_001135745,NM_139158,NM_020919	chr2,chr2,chr2	-,+,-	ALS2,CDK15,ALS2	-3565,20384,-3565
chr1:33208955-33210617	chr1	+	33209226	33210105	True	NM_020888,NM_030786	chr1,chr1	+,-	KIAA1522,SYNC	-1765,-40865
chr7:28475119-28476723	chr7	+	28475118	28476709	True	NM_004904,NM_175061	chr7,chr7	+,-	CREB5,JAZF1	62,-254681
chr1:54520741-54522023	chr1	+	54520957	54521904	True	NM_004872,NM_153035	chr1,chr1	-,+	TMEM59,TCEANC2	-1846,-1734
chr4:169401528-169402302	chr4	+	169401647	169402224	True	NM_001012967,NM_001166108	chr4,chr4	-,+	DDX60L,PALLD	-9,15992
chr6:36168665-36168890	chr6	+	36168723	36168851	True	NM_001010903,NM_015695	chr6,chr6	-,+	C6orf222,BRPF3	135861,-4224
chr12:25404486-25404851	chr12	+	25404555	25404878	True	NM_001001660,NM_004985,NM_033360	chr12,chr12,chr12	+,-,-	LYRM5,KRAS,KRAS	-56456,-701,-701
chrX:150734188-150735258	chrX	+	150734328	150735014	True	NR_029973,NM_173493	chrX,chrX	-,+	MIR452,PASD1	393220,-2372
chr2:158300437-158301003	chr2	+	158300449	158301048	True	NM_014568,NM_004288	chr2,chr2	+,-	GALNT5,CYTIP	-186160,-45
chr12:101603706-101603930	chr12	+	101603837	101603931	True	NM_014503,NM_145913	chr12,chr12	+,-	UTP20,SLC5A8	69973,135
chr9:131581569-131582284	chr9	+	131581715	131582105	True	NM_016390,NM_004435	chr9,chr9	-,+	C9orf114,ENDOG	10030,-987
chrX:144899161-144899469	chrX	+	144899342	144899486	True	NM_004709,NM_032539,NM_001144010,NM_001144003,NM_001144004,NM_001144005,NM_001144006,NR_030589,NM_001144008,NM_001144009	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,+,+,-,+,+	CXorf1,SLITRK2,SLITRK2,SLITRK2,SLITRK2,SLITRK2,SLITRK2,MIR890,SLITRK2,SLITRK2	9441,-46,3379,-46,-46,-46,3379,176433,3379,3379
chr1:43142864-43143873	chr1	+	43143167	43143905	True	NM_001123395,NM_004559	chr1,chr1	-,+	CLDN19,YBX1	62070,4160
chr1:65434537-65435841	chr1	+	65435027	65435483	True	NM_203464,NM_002227	chr1,chr1	+,-	AK4,JAK1	177748,-2840
chr1:202895761-202896159	chr1	+	202895807	202895994	True	NR_002929,NM_021633	chr1,chr1	+,-	LOC148709,KLHL12	-64976,428
chr9:130967422-130967842	chr9	+	130967476	130967836	True	NM_012127,NM_004408,NM_001005336,NM_001131015	chr9,chr9,chr9,chr9	-,+,+,-	CIZ1,DNM1,DNM1,CIZ1	-814,-1864,-1864,-814
chrY:14774717-14775001	chrY	+	14774747	14775023	True	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	-500,-241358
chr21:30561143-30562273	chr21	+	30561458	30562190	True	NM_006585,NR_027072	chr21,chr21	-,+	CCT8,NCRNA00189	-115448,3610
chrY:21235150-21235649	chrY	+	21235278	21235618	True	NR_002159,NR_001543	chrY,chrY	+,-	TTTY9B,TTTY14	-343561,3744
chr1:200639358-200641265	chr1	+	200639467	200640670	True	NM_203459,NM_001031725	chr1,chr1	+,-	CAMSAP1L1,DDX59	68015,-341
chr5:132204916-132205209	chr5	+	132205123	132205226	True	NM_014402,NM_052971,NM_005260	chr5,chr5,chr5	+,+,-	UQCRQ,LEAP2,GDF9	-2863,4131,-4646
chrX:80377302-80377582	chrX	+	80377326	80377580	True	NM_030763,NM_003022	chrX,chrX	-,+	HMGN5,SH3BGRL	79911,79722
chr6:26916227-26917870	chr6	+	26916688	26917635	True	NR_003504,NR_026775	chr6,chr6	-,+	GUSBL1,NCRNA00240	6748,7136
chr8:86280555-86281593	chr8	+	86280823	86281465	True	NM_005181,NM_001738,NM_001128829,NM_001128831,NM_001128830	chr8,chr8,chr8,chr8,chr8	+,-,-,-,-	CA3,CA1,CA1,CA1,CA1	69590,8933,8933,8933,8933
chr11:9409616-9410892	chr11	+	9410292	9410933	True	NM_006391,NR_036539	chr11,chr11	+,-	IPO7,LOC644656	-4174,71366
chr15:49458281-49458635	chr15	+	49458281	49458457	True	NM_004236,NM_002044,NR_036507	chr15,chr15,chr15	-,+,+	COPS2,GALK2,LOC100306975	-10427,3964,-9839
chr2:180105259-180106369	chr2	+	180105305	180106281	True	NM_178123,NM_019091	chr2,chr2	-,+	SESTD1,PLEKHA3	23120,-760157
chr21:43100731-43101239	chr21	+	43100774	43101234	True	NR_027272,NR_024367	chr21,chr21	-,+	C21orf129,NCRNA00111	34751,-1363
chr1:27961901-27962630	chr1	+	27961997	27962205	True	NM_001042747,NM_001042729,NM_005248,NM_001143912	chr1,chr1,chr1,chr1	-,-,-,+	FGR,FGR,FGR,FAM76A	-9246,-8891,-270,90284
chr17:26667728-26668064	chr17	+	26667869	26667933	True	NM_174887,NM_021137	chr17,chr17	-,+	IFT20,TNFAIP1	-5374,-5372
chr15:74984453-74985905	chr15	+	74984487	74985942	True	NM_001142443,NM_000761,NM_025083,NM_001142444	chr15,chr15,chr15,chr15	-,+,-,-	EDC3,CYP1A2,EDC3,EDC3	2495,55241,2495,2495
chr12:81329911-81330336	chr12	+	81329911	81330337	True	NR_030349,NM_024560,NM_004664	chr12,chr12,chr12	-,+,-	MIR618,ACSS3,LIN7A	-299,141471,1407
chr8:144101807-144102270	chr8	+	144102038	144102168	True	NM_002346,NM_001127213,NR_026913	chr8,chr8,chr8	+,+,-	LY6E,LY6E,LOC100133669	-2187,-2187,-2231
chr1:201615960-201617348	chr1	+	201616042	201617041	True	NM_020443,NM_004078	chr1,chr1	+,-	NAV1,CSRP1	408,-139655
chr13:113812069-113812909	chr13	+	113812317	113812838	True	NM_001127202,NM_003891	chr13,chr13	-,+	PCID2,PROZ	50241,129
chr12:122907429-122907800	chr12	+	122907482	122907790	True	NM_002956,NM_198240,NM_014708	chr12,chr12,chr12	-,-,+	CLIP1,CLIP1,KNTC1	-366,-366,104018
chr22:19709309-19709546	chr22	+	19709344	19709450	True	NM_024627,NM_001009939,NM_002688,NR_037611,NR_037612,NM_000407	chr22,chr22,chr22,chr22,chr22,chr22	-,+,+,+,+,+	C22orf29,SEPT5,SEPT5,SEPT5-GP1BB,SEPT5-GP1BB,GP1BB	132971,-3437,-7408,-4652,-3403,1615
chr6:12718029-12718409	chr6	+	12718144	12718441	True	NM_001143964,NM_030948	chr6,chr6	-,+	TBC1D7,PHACTR1	610397,-375
chr4:183740511-183740770	chr4	+	183740546	183740768	True	NR_003612,NM_001012732	chr4,chr4	+,-	FAM92A3,DCTD	218049,97912
chr17:4871790-4872064	chr17	+	4871909	4872073	True	NM_004890,NM_053013	chr17,chr17	-,+	SPAG7,ENO3	-777,-17576
chr20:33811910-33812326	chr20	+	33811912	33812383	True	NM_006690,NM_181468	chr20,chr20	+,-	MMP24,EIF6	2155,60182
chr19:58426057-58426786	chr19	+	58426057	58426717	True	NM_032828,NM_152475	chr19,chr19	+,-	ZNF587,ZNF417	-64931,1311
chrX:52654222-52655723	chrX	+	52654288	52655707	True	NR_027250,NM_173358	chrX,chrX	+,-	SSX8,SSX7	-2355,28305
chr11:122888338-122888573	chr11	+	122888523	122888609	True	NR_027288,NM_001098169	chr11,chr11	+,-	LOC341056,BSX	-300,-36144
chr2:119605667-119605884	chr2	+	119605674	119605900	True	NM_001426,NM_006770	chr2,chr2	-,+	EN1,MARCO	43,93844
chr4:25535879-25536415	chr4	+	25536271	25536465	True	NM_015187,NM_001177998	chr4,chr4	-,+	SEL1L3,SLC34A2	328197,120969
chr19:5784735-5784998	chr19	+	5784849	5784981	True	NM_020175,NM_001134316,NM_001161619,NM_004558	chr19,chr19,chr19,chr19	-,-,-,+	DUS3L,PRR22,DUS3L,NRTN	6318,-73,6318,38836
chr11:65117189-65117937	chr11	+	65117292	65117763	True	NM_145719,NM_001077241	chr11,chr11	+,-	TIGD3,SLC25A45	4518,32430
chr1:145576522-145578078	chr1	+	145576708	145577951	True	NM_006099,NM_001012758	chr1,chr1	+,-	PIAS3,NUDT17	-771,11534
chr8:6422572-6423344	chr8	+	6422577	6423331	True	NM_001118888,NM_018361,NM_001147,NM_001118887	chr8,chr8,chr8,chr8	-,+,-,-	ANGPT2,AGPAT5,ANGPT2,ANGPT2	-1793,142546,-1793,-1793
chr17:60214518-60214879	chr19	+	618734	619020	False	NM_005035,NM_020637	chr19,chr19	-,+	POLRMT,FGF22	14834,20905
chr17:60214518-60214879	chr17	+	60214520	60214794	True	NM_001144933,NM_005121	chr17,chr17	+,-	EFCAB3,MED13	232784,-71877
chr1:49245879-49246871	chr1	+	49246681	49246901	True	NM_024603,NM_001135181	chr1,chr1	-,+	BEND5,SLC5A9	-4134,-558376
chr1:150477247-150478134	chr1	+	150477304	150478052	True	NM_004425,NM_001202858,NM_001197320,NM_022664	chr1,chr1,chr1,chr1	+,+,-,+	ECM1,ECM1,MCL1,ECM1	2434,2434,74220,2434
chr11:122064749-122066279	chr11	+	122065387	122065973	True	NM_032873,NR_024430	chr11,chr11	+,-	UBASH3B,MIR100HG	460424,7857
chr11:65345447-65345803	chr11	+	65345530	65345794	True	NM_001099409,NM_006396,NM_152832,NM_005714,NM_001098785,NM_001098784	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,-,+,+	EHBP1L1,SSSCA1,FAM89B,KCNK7,FAM89B,FAM89B	-2072,-7638,-5761,17723,-5761,-5761
chr7:149190497-149190834	chr7	+	149190541	149190855	True	NR_036573,NM_001163474,NM_152557	chr7,chr7,chr7	+,-,-	LOC155060,ZNF746,ZNF746	-208220,4093,4093
chrX:153031162-153031374	chrX	+	153031165	153031323	True	NM_001163257,NM_004135,NM_005393	chrX,chrX,chrX	+,-,+	PLXNB3,IDH3G,PLXNB3	-1565,28694,-1565
chrX:76710583-76711793	chrX	+	76710632	76711808	True	NM_003868,NM_000489	chrX,chrX	+,-	FGF16,ATRX	-1036,329961
chr17:79198046-79198906	chr17	+	79198659	79198806	True	NM_001009811,NM_014984,NM_001086521	chr17,chr17,chr17	-,-,+	AZI1,AZI1,C17orf89	-1908,-1908,14304
chr19:51529450-51529968	chr19	+	51529595	51529889	True	NM_145894,NM_145895,NM_019598,NM_002776,NM_001136032,NM_145888,NM_001077500,NM_001167605,NM_006853,NM_144947,NM_014441	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,-,-,-,+	KLK12,KLK12,KLK12,KLK10,KLK11,KLK10,KLK10,KLK11,KLK11,KLK11,SIGLEC9	8309,8309,8309,-6313,33,-6641,-6164,1451,1451,1046,98247
chr19:36643649-36644257	chr19	+	36643672	36643996	True	NM_001749,NM_001864	chr19,chr19	+,-	CAPNS1,COX7A1	-12805,11
chr6:167736383-167737842	chr6	+	167736624	167737800	True	NM_004610,NM_031949	chr6,chr6	-,+	TCP10,TTLL2	60248,773
chr22:35530321-35531699	chr22	+	35530458	35531687	True	NM_001008494,NM_005368	chr22,chr22	+,-	ISX,MB	-68379,481747
chr12:104443618-104444004	chr12	+	104443617	104444031	True	NM_013320,NM_031302	chr12,chr12	+,-	HCFC2,GLT8D2	14204,-66
chr1:153894432-153894939	chr1	+	153894436	153894659	True	NM_130898,NM_020699	chr1,chr1	+,-	CREB3L4,GATAD2B	45737,848
chr21:42540702-42540972	chr21	+	42540773	42541004	True	NM_182832,NM_138991,NR_036167,NM_012105,NM_138992	chr21,chr21,chr21,chr21,chr21	-,+,+,+,+	PLAC4,BACE2,MIR3197,BACE2,BACE2	16212,-1096,-1340,-1096,-1096
chr12:64796093-64797464	chr12	+	64796167	64797416	True	NM_001170633,NM_007235	chr12,chr12	-,+	C12orf56,XPOT	-11822,736
chr9:136501874-136502746	chr9	+	136501911	136502716	True	NM_000787,NM_001080515	chr9,chr9	+,-	DBH,FAM163B	-477,-56543
chr11:18604858-18605275	chr11	+	18605046	18605133	True	NM_153347,NM_001040697,NM_018314	chr11,chr11,chr11	+,-,-	TMEM86A,UEVLD,UEVLD	115217,5211,5211
chr19:46526365-46526567	chr19	+	46526365	46526471	True	NR_030412,NM_005091	chr19,chr19	+,-	MIR769,PGLYRP1	-4226,135
chr11:46383922-46384335	chr11	+	46384016	46384282	True	NM_000741,NM_001105540	chr11,chr11	-,+	CHRM4,DGKZ	23875,-922
chr3:108308394-108308783	chr3	+	108308483	108308657	True	NM_020890,NM_014648	chr3,chr3	-,+	KIAA1524,DZIP3	-4,-197
chr19:19315211-19315954	chr19	+	19315226	19315824	True	NM_176880,NM_004386	chr19,chr19	-,+	NR2C2AP,NCAN	-988,6957
chr4:87835068-87835521	chr4	+	87835102	87835518	True	NM_144645,NM_001166693	chr4,chr4	-,+	C4orf36,AFF1	-21527,20635
chr7:1498318-1498599	chr7	+	1498478	1498610	True	NM_002360,NM_182924	chr7,chr7	+,-	MAFK,MICALL2	71757,549
chr9:104246939-104248320	chr9	+	104247042	104248301	True	NM_019592,NM_032342	chr9,chr9	+,-	RNF20,C9orf125	47831,1224
chr8:110342382-110343262	chr8	+	110342516	110343028	True	NM_001193557,NR_036472,NM_020189,NR_036471,NM_001128211,NM_032869	chr8,chr8,chr8,chr8,chr8,chr8	+,+,+,+,-,-	ENY2,ENY2,ENY2,ENY2,NUDCD1,NUDCD1	3523,3523,3523,3523,-354,3372
chr1:113158652-113159219	chr1	+	113158690	113159104	True	NM_017744,NM_138728,NM_138729,NM_006135,NM_138727	chr1,chr1,chr1,chr1,chr1	-,-,-,+,-	ST7L,ST7L,ST7L,CAPZA1,ST7L	2986,2986,2986,2970,2986
chr9:99687639-99689156	chr9	+	99688008	99688981	True	NM_001170741,NM_001045477,NM_001001662	chr9,chr9,chr9	+,+,-	FAM22G,FAM22G,ZNF782	2304,2304,-71619
chr9:99687639-99689156	chr9	-	97093708	97093758	False	NM_017561,NR_033937	chr9,chr9	-,+	FAM22F,LOC100132077	-2782,999
chr12:12868981-12869368	chr12	+	12869113	12869369	True	NM_004064,NM_006143,NM_001130415	chr12,chr12,chr12	+,-,+	CDKN1B,GPR19,APOLD1	932,-19992,9481
chr19:42638536-42638980	chr19	+	42638958	42639022	True	NM_022752,NM_002698,NR_036208	chr19,chr19,chr19	+,-,-	ZNF574,POU2F2,MIR4323	-58719,-2328,-1293
chr3:98476514-98476770	chr3	+	98476536	98476610	True	NM_006100,NM_080927	chr3,chr3	+,-	ST3GAL6,DCBLD2	-25023,143979
chr11:32816871-32817326	chr11	+	32817068	32817229	True	NM_001008391,NM_024081	chr11,chr11	-,+	CCDC73,PRRG4	-881,34259
chr7:26678505-26679970	chr7	+	26678569	26680019	True	NR_022006,NM_001145531	chr7,chr7	-,+	KIAA0087,C7orf71	-100125,-1130
chr19:16224302-16224933	chr19	+	16224534	16224886	True	NM_005370,NM_054113	chr19,chr19	+,-	RAB8A,CIB3	-2106,59451
chr6:55432699-55434447	chr6	+	55433046	55434495	True	NM_207410,NM_019036,NM_001042406	chr6,chr6,chr6	+,-,-	GFRAL,HMGCLL1,HMGCLL1	-240834,9567,9567
chr1:170630494-170630710	chr1	+	170630493	170630723	True	NM_022716,NM_006902,NR_026957	chr1,chr1,chr1	+,+,-	PRRX1,PRRX1,LOC284688	2589,2589,-377144
chr3:31494261-31494662	chr3	+	31494260	31494594	True	NM_178862,NM_001174060	chr3,chr3	+,-	STT3B,OSBPL10	79896,528798
chr18:23612345-23613332	chr18	+	23612422	23613177	True	NM_001007559,NM_001025096	chr18,chr18	-,+	SS18,PSMA8	57495,100638
chr9:123477111-123477448	chr9	+	123477230	123477402	True	NR_027442,NM_001080497	chr9,chr9	+,-	LOC100288842,MEGF9	78372,-465
chr17:74602409-74603929	chr17	+	74603088	74603793	True	NM_006456,NR_004395	chr17,chr17	-,+	ST6GALNAC2,SNORD1A	-20943,-45424
chr9:140355304-140355783	chr9	+	140355384	140355762	True	NM_001130971,NM_001130970,NM_006647,NM_001178064,NM_015537,NM_001130969	chr9,chr9,chr9,chr9,chr9,chr9	-,-,+,-,-,-	NELF,NELF,NOXA1,NELF,NELF,NELF	-1598,-1598,-37588,-1598,-1598,-1598
chr3:195633181-195633704	chr3	+	195633287	195633597	True	NM_001098516,NM_005781	chr3,chr3	+,-	MUC20,TNK2	-182240,2337
chr19:39804093-39804627	chr19	+	39804211	39804637	True	NM_172140,NM_020862	chr19,chr19	+,-	IL29,LRFN1	-17304,1389
chr12:56580969-56581970	chr12	+	56580970	56581961	True	NM_139067,NM_003075,NM_001130420,NM_079423	chr12,chr12,chr12,chr12	-,-,-,+	SMARCC2,SMARCC2,SMARCC2,MYL6	1441,1441,1441,-28976
chr19:33714606-33715494	chr19	+	33714617	33715187	True	NM_002333,NM_019849	chr19,chr19	+,-	LRP3,SLC7A10	-29069,1619
chr7:5111021-5111420	chr7	+	5111307	5111451	True	NR_015343,NR_034163	chr7,chr7	+,-	LOC389458,ZNF890P	239,72776
chr1:246891143-246891857	chr1	+	246891205	246891877	True	NM_022366,NM_016002	chr1,chr1	-,+	TFB2M,SCCPDH	-161640,-3878
chr22:29876226-29876500	chr22	+	29876294	29876514	True	NR_002727,NM_021076	chr22,chr22	-,+	RFPL1S,NEFH	-38176,-164
chr7:151040053-151041121	chr7	+	151040083	151040993	True	NM_198285,NM_016118,NM_003078	chr7,chr7,chr7	-,+,-	WDR86,NUB1,SMARCD3	66181,-1277,-65852
chr1:76251606-76251901	chr1	+	76251704	76251780	True	NM_004582,NM_080868,NR_003042,NR_002749,NR_002748	chr1,chr1,chr1,chr1,chr1	+,-,+,+,+	RABGGTB,ASB17,SNORD45C,SNORD45A,SNORD45B	105,146386,976,1793,3381
chr1:23620371-23621535	chr1	+	23620507	23621579	True	NR_033690,NM_001102397	chr1,chr1	+,-	C1orf213,HNRNPR	73884,49325
chrX:153713691-153714370	chrX	+	153713782	153714344	True	NM_001142392,NM_019848,NM_001142391,NM_014235,NM_017514,NM_006014	chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,+,-	SLC10A3,SLC10A3,SLC10A3,UBL4A,PLXNA3,LAGE3	4708,4708,4708,638,-27210,-6186
chr17:29420780-29421414	chr17	+	29420885	29421449	True	NM_001128147,NM_001042492,NM_000267,NM_024683	chr17,chr17,chr17,chr17	+,+,+,-	NF1,NF1,NF1,C17orf42	495,495,495,-187599
chr4:86853783-86855758	chr4	+	86854163	86855600	True	NM_031305,NM_138981	chr4,chr4	+,-	ARHGAP24,MAPK10	-2790,173269
chr16:75676190-75676501	chr16	+	75676397	75676529	True	NM_005548,NM_001130089,NM_018975	chr16,chr16,chr16	-,-,+	KARS,KARS,TERF2IP	5106,5106,5105
chr8:145701444-145702166	chr8	+	145701459	145702031	True	NM_003923,NM_145754	chr8,chr8	-,+	FOXH1,KIFC2	17,-9772
chr22:21919964-21920182	chr22	+	21920080	21920196	True	NM_001128633,NR_028437,NM_003347,NR_028436	chr22,chr22,chr22,chr22	-,+,+,+	RIMBP3C,UBE2L3,UBE2L3,UBE2L3	-14330,1760,1760,1760
chr11:104028396-104029280	chr11	+	104028698	104029284	True	NM_033135,NM_025208,NM_001001711	chr11,chr11,chr11	-,-,+	PDGFD,PDGFD,DDI1	5793,5793,-121448
chr2:197664090-197664316	chr2	+	197664208	197664350	True	NM_001080539,NM_012086	chr2,chr2	+,-	CCDC150,GTF3C3	-159903,125
chr5:52405414-52405615	chr5	+	52405446	52405650	True	NR_034107,NM_004531,NM_176806	chr5,chr5,chr5	+,-,-	LOC257396,MOCS2,MOCS2	36,-121,-2
chr3:127298708-127300475	chr3	+	127299200	127300453	True	NM_001142646,NM_016372,NM_001136053,NM_004526	chr3,chr3,chr3,chr3	-,-,-,+	TPRA1,TPRA1,TPRA1,MCM2	9174,80,9102,16799
chr7:142961921-142962154	chr7	+	142961934	142962190	True	NM_001143680,NM_001143681,NM_001143679,NM_015917,NM_014690	chr7,chr7,chr7,chr7,chr7	+,+,+,+,-	GSTK1,GSTK1,GSTK1,GSTK1,FAM131B	-1463,-1463,-1463,-1463,97033
chr15:51056864-51057575	chr15	+	51057186	51057443	True	NM_032802,NM_007347	chr15,chr15	-,+	SPPL2A,AP4E1	517,143502
chr11:57151706-57152849	chr11	+	57151743	57152573	True	NM_002728,NM_006093,NM_002559	chr11,chr11,chr11	-,-,+	PRG2,PRG3,P2RX3	5619,-3120,-45845
chr9:112261189-112261688	chr9	+	112261243	112261715	True	NM_001145368,NM_002829,NM_001037293	chr9,chr9,chr9	-,-,+	PTPN3,PTPN3,PALM2	-650,-650,141352
chr8:11947427-11949279	chr4	-	9410201	9410251	True	NR_031688,NM_001040448	chr4,chr4	-,+	MIR548I2,DEFB131	147736,36008
chr8:11947427-11949279	chr8	+	11947475	11949093	False	NM_001195257,NM_001039615	chr8,chr8	-,+	LOC100133267,ZNF705D	-18219,-679
chr12:77461050-77462688	chr12	+	77461097	77462408	True	NM_203394,NM_015336	chr12,chr12	-,+	E2F7,ZDHHC17	-1737,-303302
chr5:142003000-142003778	chr5	+	142003213	142003288	True	NM_001144892,NM_001135608,NM_033137	chr5,chr5,chr5	-,+,-	FGF1,ARHGAP26,FGF1	-2306,147003,-9487
chr4:82098711-82100201	chr4	+	82098881	82099776	True	NM_006259,NM_001201	chr4,chr4	-,+	PRKG2,BMP3	26505,-146814
chr16:14393879-14394279	chr16	+	14394086	14394261	True	NR_029854,NM_001134477,NR_030177	chr16,chr16,chr16	+,-,+	MIR365-1,PARN,MIR193B	8880,329910,3562
chr4:140220282-140221427	chr4	+	140220660	140221476	True	NM_001184987,NM_001184986,NM_001184990,NM_001184991,NM_001184989,NM_001184988,NM_057175,NM_002494	chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4	-,-,-,-,-,-,+,-	NDUFC1,NDUFC1,NDUFC1,NDUFC1,NDUFC1,NDUFC1,NAA15,NDUFC1	2279,938,2279,938,2279,2279,1199,962
chr10:103346390-103347134	chr10	+	103346583	103347157	True	NM_015448,NM_013274,NR_033406,NM_001174085,NM_001174084	chr10,chr10,chr10,chr10,chr10	+,-,-,-,-	DPCD,POLL,POLL,POLL,POLL	931,920,920,920,920
chrX:118284531-118284759	chrX	+	118284580	118284808	True	NM_006667,NM_020721	chrX,chrX	+,-	PGRMC1,KIAA1210	85402,-38
chr12:113623234-113623510	chr12	+	113623233	113623449	True	NM_024072,NM_001111322,NM_032848	chr12,chr12,chr12	-,-,+	DDX54,DDX54,C12orf52	-39,-39,105
chr19:48019152-48020277	chr19	+	48019415	48020126	True	NM_015711,NM_003827	chr19,chr19	+,-	GLTSCR1,NAPA	91326,-918
chr1:67419086-67419498	chr1	+	67419086	67419270	True	NM_001077704,NM_207014	chr1,chr1	+,-	MIER1,WDR78	-23214,-28516
chr1:4717016-4717298	chr1	+	4717024	4717343	True	NM_018836,NM_001042478,NM_207356	chr1,chr1,chr1	+,+,-	AJAP1,AJAP1,C1orf174	-1970,-1970,-900167
chr5:131708132-131709626	chr5	+	131708331	131709619	True	NM_003060,NR_037500,NR_037898	chr5,chr5,chr5	+,-,-	SLC22A5,MIR3936,LOC553103	-2988,-7040,-2723
chr5:93914785-93916301	chr5	+	93914995	93916178	True	NM_001145678,NM_032290	chr5,chr5	-,+	KIAA0825,ANKRD32	38190,38212
chr1:117209194-117209652	chr1	+	117209221	117209559	True	NR_031564,NM_001007237,NM_001542	chr1,chr1,chr1	+,-,-	MIR320B1,IGSF3,IGSF3	4811,805,805
chr8:1993985-1994492	chr8	+	1994009	1994501	True	NR_033895,NM_003970	chr8,chr8	-,+	LOC286083,MYOM2	-743182,-903
chr2:198300710-198301542	chr2	+	198300714	198300986	True	NM_025147,NM_001005526,NM_012433	chr2,chr2,chr2	+,-,-	COQ10B,SF3B1,SF3B1	17244,-943,-943
chr2:142887434-142887647	chr2	+	142887473	142887669	True	NM_018557,NM_001032998	chr2,chr2	-,+	LRP1B,KYNU	1651,747525
chr1:35247334-35247579	chr1	+	35247514	35247604	True	NM_001164824,NM_024009,NM_001005752	chr1,chr1,chr1	-,+,+	C1orf212,GJB3,GJB3	77092,-775,306
chr12:107973509-107974341	chr12	+	107973609	107974223	True	NM_012406,NM_001017523	chr12,chr12	-,+	PRDM4,BTBD11	180741,410
chr2:170359917-170361309	chr2	+	170360269	170361097	True	NM_006063,NM_024622	chr2,chr2	+,-	KBTBD10,FASTKD1	5114,69377
chrX:144325149-144325461	chrX	+	144325233	144325306	True	NR_030589,NM_001009614	chrX,chrX	-,+	MIR890,SPANXN1	750614,3800
chr22:32812405-32812757	chr22	+	32812404	32812778	True	NM_014306,NM_012179	chr22,chr22	-,+	C22orf28,FBXO7	-4130,57928
chr5:172444133-172444459	chr5	+	172444176	172444260	True	NR_002988,NR_026682	chr5,chr5	+,-	SNORA74B,LOC100268168	3468,-57805
chr16:70288158-70288650	chr16	+	70288170	70288610	True	NM_058219,NM_001014449	chr16,chr16	-,+	EXOSC6,DDX19B	-2337,44461
chr20:62206715-62206948	chr20	+	62206728	62206908	True	NM_033405,NM_024059,NM_001037335	chr20,chr20,chr20	-,+,-	PRIC285,C20orf195,PRIC285	-7621,-22406,-1136
chr8:57500331-57501937	chr8	+	57500440	57501872	True	NM_001135690,NM_024300	chr8,chr8	-,+	PENK,CHCHD7	-141158,-376176
chr16:67930305-67930536	chr16	+	67930305	67930415	True	NM_006742,NM_001907	chr16,chr16	+,-	PSKH1,CTRL	-3182,35413
chr22:24303691-24304087	chr22	+	24303715	24303931	True	NM_001080843,NM_000854,NM_001084393	chr22,chr22,chr22	-,-,+	GSTT2B,GSTT2,DDTL	-347,-322,5094
chr22:24303691-24304087	chr22	-	24321775	24321991	False	NM_001355,NM_000854,NM_001084392	chr22,chr22,chr22	-,+,-	DDT,GSTT2,DDT	78,322,-5095
chr14:94528159-94528840	chr14	+	94528223	94528811	True	NM_020414,NM_145249	chr14,chr14	-,+	DDX24,IFI27L1	18797,18827
chr17:56605466-56606241	chr17	+	56605544	56606098	True	NM_002876,NM_004574,NM_080415,NM_080416,NR_037156,NR_037155	chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,-,-,-	RAD51C,SEPT4,SEPT4,SEPT4,SEPT4,SEPT4	163864,730,3395,3395,-170,730
chr9:36136992-36137226	chr9	+	36137051	36137143	True	NM_001190383,NM_022343	chr9,chr9	-,+	GNE,GLIPR2	121403,-360
chr17:56159562-56160137	chr17	+	56159565	56160141	True	NR_034041,NM_080677	chr17,chr17	-,+	SRSF1,DYNLL2	-74858,638
chr16:47007960-47008341	chr16	+	47008097	47008389	True	NM_005880,NM_001142466	chr16,chr16	-,+	DNAJA2,GPT2	-472,-89049
chr22:22020674-22021020	chr22	+	22020688	22020810	True	NM_148175,NM_148176,NM_014337,NM_001017964	chr22,chr22,chr22,chr22	+,+,+,-	PPIL2,PPIL2,PPIL2,YDJC	-466,-466,-466,-36348
chr2:136632901-136633140	chr2	+	136632941	136633167	True	NM_014607,NM_005915	chr2,chr2	+,-	UBXN4,MCM6	-133803,894
chr17:27892935-27893160	chr17	+	27892938	27893122	True	NM_138349,NM_198147	chr17,chr17	+,-	TP53I13,ABHD15	2616,970
chr6:33255389-33256375	chr6_qbl_hap6	+	4487647	4488500	False	NM_014260,NM_001185181,NM_001164267,NM_005452	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	+,+,-,-	PFDN6,PFDN6,WDR46,WDR46	1120,1154,1098,1098
chr6:33255389-33256375	chr6_mcf_hap5	+	4729148	4730164	False	NM_014260,NM_001164267,NM_005452	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	+,-,-	PFDN6,WDR46,WDR46	957,934,934
chr6:33255389-33256375	chr6_cox_hap2	+	4699218	4700234	False	NM_014260,NM_001164267,NM_005452	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,-,-	PFDN6,WDR46,WDR46	957,934,934
chr6:33255389-33256375	chr6	+	33255404	33256420	True	NM_014260,NM_001185181,NM_001164267,NM_005452	chr6,chr6,chr6,chr6	+,+,-,-	PFDN6,PFDN6,WDR46,WDR46	957,991,934,934
chr6:33255389-33256375	chr6_dbb_hap3	+	4536730	4537746	False	NM_014260,NM_001164267,NM_005452	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	+,-,-	PFDN6,WDR46,WDR46	957,934,934
chr5:150154648-150155174	chr5	+	150154870	150155194	True	NM_032947,NM_016221	chr5,chr5	+,-	C5orf62,DCTN4	2313,-16213
chr22:50706916-50707495	chr22	+	50706918	50707532	True	NM_031454,NM_002969,NM_002751	chr22,chr22,chr22	+,-,-	SELO,MAPK12,MAPK11	-67561,-6829,1297
chr3:10156116-10156325	chr3	+	10156254	10156336	True	NM_173472,NM_018462,NM_001164839	chr3,chr3,chr3	-,+,-	C3orf24,C3orf10,C3orf24	-6339,996,-6339
chr3:195621056-195621273	chr3	+	195621060	195621250	True	NM_001098516,NM_001010938	chr3,chr3	+,-	MUC20,TNK2	-170020,1232
chr16:30218925-30219153	chr16	+	30218969	30219061	True	NR_002556,NR_002557,NM_001017390,NM_177552	chr16,chr16,chr16,chr16	-,-,+,+	LOC388242,LOC613038,SULT1A4,SULT1A3	-721,-721,-8478,-8478
chr16:30218925-30219153	chr16	+	29479623	29479715	False	NR_002556,NR_002557,NM_001017390,NM_177552	chr16,chr16,chr16,chr16	-,-,+,+	LOC388242,LOC613038,SULT1A4,SULT1A3	-724,-724,-8474,-8474
chr7:100304632-100306358	chr7	+	100304654	100306300	True	NM_005837,NM_022574	chr7,chr7	+,-	POP7,GIGYF1	-1029,-17784
chr4:4309387-4310425	chr4	+	4309451	4310417	True	NM_017816,NM_145291	chr4,chr4	-,+	LYAR,ZBTB49	-17555,-17585
chr11:31519290-31520632	chr11	+	31519458	31520635	True	NM_144981,NM_019040	chr11,chr11	-,+	IMMP1L,ELP4	10584,10661
chr1:116385127-116386242	chr1	+	116385201	116386266	True	NM_018420,NM_001111061,NM_005599	chr1,chr1,chr1	+,-,-	SLC22A15,NHLH2,NHLH2	132852,-1868,-1454
chr3:52269734-52270239	chr3	+	52269768	52269854	True	NM_017442,NM_007284,NM_144641	chr3,chr3,chr3	-,-,+	TLR9,TWF2,PPM1M	-9589,3379,9954
chr19:56163820-56164137	chr19	+	56163854	56164138	True	NM_203374,NM_007279,NM_001012478,NM_016535,NM_013301	chr19,chr19,chr19,chr19,chr19	-,+,+,+,+	ZNF784,U2AF2,U2AF2,ZNF581,CCDC106	-27913,1277,1277,-8919,-4951
chr2:24299629-24300079	chr2	+	24300067	24300127	True	NM_147184,NM_054033,NM_004881,NM_016047	chr2,chr2,chr2,chr2	-,+,-,-	TP53I3,FKBP1B,TP53I3,SF3B14	7578,-27534,7651,-753
chr8:96035514-96036141	chr8	+	96035570	96035952	True	NR_037484,NM_152416	chr8,chr8	-,+	MIR3150B,C8orf38	49328,1268
chr17:61030366-61030699	chr17	+	61030436	61030683	True	NM_152598,NM_025185	chr17,chr17	-,+	MARCH10,TANC2	-144731,56214
chr9:28662750-28663314	chr9	+	28662801	28663155	True	NM_152570,NM_020124	chr9,chr9	-,+	LINGO2,IFNK	56198,-1138550
chr9:119404175-119405585	chr9	+	119404213	119405254	True	NM_198186,NM_001099679	chr9,chr9	-,+	ASTN2,TRIM32	44290,44326
chr1:17636169-17636540	chr1	+	17636326	17636472	True	NM_001136204,NM_012387	chr1,chr1	-,+	RCC2,PADI4	128635,-1687
chr19:632534-632778	chr19	+	632546	632774	True	NM_005035,NM_020637	chr19,chr19	-,+	POLRMT,FGF22	844,7151
chr7:2561043-2561510	chr7	+	2561102	2561502	True	NM_002304,NM_001040167,NM_001040168,NM_001166355,NM_152743	chr7,chr7,chr7,chr7,chr7	+,+,+,+,-	LFNG,LFNG,LFNG,LFNG,BRAT1	-3656,-1674,-1674,-8990,33940
chr8:82447768-82449388	chr8	+	82447849	82449157	True	NM_152284,NM_001105281	chr8,chr8	+,-	CHMP4C,FABP12	195530,-4299
chr15:83222229-83222440	chr15	+	83222268	83222474	True	NM_001199057,NR_033579	chr15,chr15	-,+	LOC100505503,LOC440297	-13060,-92287
chr11:126153397-126154087	chr11	+	126153420	126153841	True	NM_148910,NM_003139,NM_001039661	chr11,chr11,chr11	+,-,+	TIRAP,SRPR,TIRAP	-491,-14543,-491
chr11:86662966-86664817	chr11	+	86663054	86664286	True	NM_012193,NM_001168724	chr11,chr11	-,+	FZD4,TMEM135	2209,84599
chr12:31745763-31746596	chr12	+	31746078	31746340	True	NM_001135864,NM_144973	chr12,chr12	+,-	METTL20,DENND5B	53753,-2126
chr11:8979729-8980411	chr11	+	8980016	8980457	True	NM_182901,NM_020644	chr11,chr11	+,-	C11orf17,TMEM9B	-47271,5582
chr15:76603978-76604370	chr15	+	76604102	76604269	True	NM_001127716,NM_145805,NM_000126	chr15,chr15,chr15	-,+,-	ETFA,ISL2,ETFA	-292,24877,-292
chr19:54493112-54493498	chr19	+	54493203	54493541	True	NM_145814,NM_145815,NM_198481,NR_030632,NM_031897	chr19,chr19,chr19,chr19,chr19	+,+,-,+,+	CACNG6,CACNG6,VSTM1,MIR935,CACNG6	2000,2000,73716,-7693,2000
chr11:65365010-65365429	chr11	+	65365102	65365292	True	NM_032223,NM_033347,NM_005714,NM_033348,NM_033455	chr11,chr11,chr11,chr11,chr11	+,-,-,-,-	PCNXL3,KCNK7,KCNK7,KCNK7,KCNK7	18490,-1635,-1635,-1635,-1635
chr7:128415038-128416762	chr7	+	128415113	128416632	True	NM_001201372,NM_001708	chr7,chr7	+,-	CCDC136,OPN1SW	14831,-70
chr16:78054675-78055207	chr16	+	78054694	78055106	True	NM_005752,NM_199355	chr16,chr16	+,-	CLEC3A,ADAMTS18	1336,-585683
chr3:169899580-169900466	chr3	+	169900001	169900497	True	NM_002740,NM_024947	chr3,chr3	+,-	PRKCI,PHC3	39722,-464
chr12:53729568-53729854	chr12	+	53729582	53729658	True	NM_021640,NM_001173467,NM_152860	chr12,chr12,chr12	+,-,-	C12orf10,SP7,SP7	-36163,396,-45
chr11:109920524-109920833	chr11	+	109920649	109920849	True	NM_033390,NM_002906	chr11,chr11	+,-	ZC3H12C,RDX	43237,246638
chr1:120047008-120048434	chr1	+	120047219	120048207	True	NM_000862,NR_036540	chr1,chr1	+,-	HSD3B1,LOC644242	1618,93770
chr17:42149130-42149788	chr17	+	42149176	42149598	True	NR_028581,NR_028582,NM_138387,NM_152344	chr17,chr17,chr17,chr17	+,+,+,-	G6PC3,G6PC3,G6PC3,LSM12	-1129,-1129,-1129,-4189
chr19:40917439-40919172	chr19	+	40917755	40919136	True	NM_181882,NM_020971,NM_020956	chr19,chr19,chr19	-,+,-	PRX,SPTBN4,PRX	185,53989,185
chr19:53233567-53234714	chr19	+	53233672	53234184	True	NR_023311,NM_001161499,NM_001161500,NM_001161501,NM_030972	chr19,chr19,chr19,chr19,chr19	+,-,-,-,-	ZNF137P,ZNF611,ZNF611,ZNF611,ZNF611	-133796,4183,4183,4173,-537
chr14:105959016-105959228	chr14	+	105959030	105959246	True	NM_001311,NM_001519,NM_001198983,NM_001134876,NM_001134877,NM_001134875	chr14,chr14,chr14,chr14,chr14,chr14	+,-,+,+,+,+	CRIP1,BRF1,C14orf80,C14orf80,C14orf80,C14orf80	-5824,-191701,-2889,-1495,-2561,-1495
chr1:29451934-29452134	chr1	+	29452095	29452173	True	NM_001003682,NM_001195001,NM_001171868	chr1,chr1,chr1	-,+,-	TMEM200B,PTPRU,TMEM200B	-1674,110854,-3082
chr1:120611451-120611685	chr1	+	120611468	120611716	True	NM_001200001,NM_024408,NM_001100910	chr1,chr1,chr1	-,-,+	NOTCH2,NOTCH2,FAM72B	651,651,227288
chr1:120611451-120611685	chr1	-	145209727	145209797	False	NM_203458,NM_022359	chr1,chr1	+,-	NOTCH2NL,PDE4DIP	-667,-133541
chr1:211306882-211307176	chr1	+	211306924	211307216	True	NM_001136225,NM_002238,NM_172362	chr1,chr1,chr1	+,-,-	RCOR3,KCNH1,KCNH1	125491,291,291
chr7:43905466-43906462	chr7	+	43905465	43906425	True	NM_032014,NM_015983	chr7,chr7	-,+	MRPS24,UBE2D4	2770,59609
chr2:98197886-98198356	chr2	+	98197977	98198141	True	NM_025190,NM_001862	chr2,chr2	-,+	ANKRD36B,COX5B	8339,64379
chr2:98197886-98198356	chr2	+	96649054	96649118	False	NM_207328,NR_003698	chr2,chr2	-,+	GPAT2,LOC729234	51673,27180
chr2:98197886-98198356	chr2	-	97787535	97787675	False	NM_199336,NM_001164315	chr2,chr2	-,+	FAHD2B,ANKRD36	-26953,-8355
chr3:141941329-141941858	chr3	+	141941432	141941867	True	NM_001679,NM_001039547,NR_033289	chr3,chr3,chr3	+,-,-	ATP1B3,GK5,GK5	-346020,2632,2632
chr16:30420454-30420907	chr16	+	30420583	30420765	True	NM_024096,NM_001142305,NM_016643	chr16,chr16,chr16	-,+,+	DCTPP1,ZNF771,ZNF771	20666,-1899,-1899
chrX:70500989-70501775	chrX	+	70501285	70501619	True	NM_007363,NM_001171162,NM_001145410,NM_001145409,NM_001145408	chrX,chrX,chrX,chrX,chrX	+,-,+,+,+	NONO,ZMYM3,NONO,NONO,NONO	1422,-26238,1422,1422,1422
chr10:103911423-103911936	chr10	+	103911422	103911913	True	NM_001113407,NM_004741	chr10,chr10	-,+	LDB1,NOLC1	-31212,19
chr19:56460968-56461380	chr19	+	56461037	56461368	True	NM_176810,NM_176811	chr19,chr19	-,+	NLRP13,NLRP8	-17335,-1890
chr12:58089862-58090137	chr12	+	58090060	58090134	True	NM_006812,NM_001017958,NM_001122772,NM_001017957,NM_001017956	chr12,chr12,chr12,chr12,chr12	+,+,-,+,+	OS9,OS9,AGAP2,OS9,OS9	-2373,-2373,41945,-2373,-2373
chr12:65563089-65563338	chr12	+	65563093	65563379	True	NM_001167614,NM_007191,NM_014319	chr12,chr12,chr12	+,-,+	LEMD3,WIF1,LEMD3	-13,-47747,-13
chr19:59058657-59059285	chr19	+	59058751	59059243	True	NM_198426,NM_014453,NM_005762	chr19,chr19,chr19	-,-,+	CHMP2A,CHMP2A,TRIM28	7162,7293,-2966
chr21:28516198-28517384	chr21	+	28516525	28517421	True	NR_024357,NM_007038	chr21,chr21	+,-	NCRNA00113,ADAMTS5	577276,-177086
chr1:26671745-26672002	chr1	+	26671861	26671949	True	NM_001039775,NM_001803	chr1,chr1	-,+	AIM1L,CD52	8722,-27501
chr12:12419460-12419696	chr12	+	12419601	12419665	True	NM_058169,NM_002336	chr12,chr12	+,-	LOH12CR1,LRP6	90354,196
chr1:110881266-110881577	chr1	+	110881398	110881564	True	NM_001201545,NR_036595,NM_022768	chr1,chr1,chr1	+,-,+	RBM15,LOC440600,RBM15	380,287,380
chr22:36926536-36927685	chr22	+	36926731	36927522	True	NM_003753,NM_145343	chr22,chr22	-,+	EIF3D,APOL1	-1454,-277672
chr2:204799576-204799920	chr2	+	204799624	204799876	True	NM_203365,NM_012092	chr2,chr2	-,+	RAPH1,ICOS	-399566,1594
chr19:20605817-20606248	chr19	+	20605989	20606219	True	NR_036455,NM_052852	chr19,chr19	-,+	ZNF826P,ZNF486	1603,-327960
chr4:37891485-37891791	chr4	+	37891643	37891721	True	NM_001085400,NM_015173	chr4,chr4	-,+	RELL1,TBC1D1	-203644,998
chr4:79498603-79499152	chr4	+	79498631	79499071	True	NM_005139,NM_001040202	chr4,chr4	+,-	ANXA3,PAQR3	-25947,361561
chr12:113443277-113444294	chr12	+	113443790	113444318	True	NM_016817,NM_001193521	chr12,chr12	+,-	OAS2,RASAL1	-27567,129291
chr2:37309515-37309907	chr2	+	37309553	37309912	True	NM_174931,NM_019024	chr2,chr2	+,-	CCDC75,HEATR5B	1681,1624
chr17:27625501-27625862	chr17	+	27625533	27625683	True	NM_005208,NM_020772	chr17,chr17	+,-	CRYBA1,NUFIP2	-51715,-4367
chr1:212964119-212964909	chr1	+	212964423	212964854	True	NM_001042553,NM_001042552,NM_001146170,NM_001146171,NM_001146169,NM_001042549,NM_015471	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-,-	TATDN3,TATDN3,TATDN3,TATDN3,TATDN3,NSL1,NSL1	315,315,315,315,315,336,336
chr15:91535038-91536922	chr15	+	91535095	91536943	True	NM_199413,NM_033544,NM_199414,NM_003981	chr15,chr15,chr15,chr15	-,+,-,-	PRC1,RCCD1,PRC1,PRC1	912,-37040,912,912
chr19:4153930-4154227	chr19	+	4153990	4154054	True	NM_032607,NM_001193285	chr19,chr19	+,-	CREB3L3,SIRT6	-412,28592
chr8:143749446-143749767	chr8	+	143749507	143749795	True	NR_033343,NM_003724,NM_001077527	chr8,chr8,chr8	+,-,-	PSCA,JRK,JRK	1930,1656,1656
chr12:7060660-7060915	chr12	+	7060669	7060903	True	NM_138425,NM_080548,NM_080549,NR_003010,NM_002831	chr12,chr12,chr12,chr12,chr12	+,+,+,-,+	C12orf57,PTPN6,PTPN6,SCARNA12,PTPN6	-7517,-4980,-286,15916,-286
chr20:31618486-31618826	chr20	+	31618491	31618829	True	NM_080675,NM_174897	chr20,chr20	-,+	SUN5,BPIL3	-26252,624
chr22:19935469-19937119	chr22	+	19935520	19937067	True	NM_001135162,NM_001135161,NM_000754,NM_006440	chr22,chr22,chr22,chr22	+,+,+,-	COMT,COMT,COMT,TXNRD2	1977,1392,-6309,-6161
chr5:149565895-149566635	chr5	+	149565906	149566466	True	NM_002609,NM_014228	chr5,chr5	-,+	PDGFRB,SLC6A7	-30484,3053
chr7:143534254-143534461	chr7	+	143534297	143534366	True	NR_015421,NM_001004685	chr7,chr7	-,+	LOC154761,OR2F2	-487,97959
chr7:143534254-143534461	chr7	-	143317479	143317548	False	NM_178561,NM_001130025,NM_173678	chr7,chr7,chr7	-,+,+	CTAGE6P,FAM115C,FAM115C	137345,496,993
chr6:26126776-26128154	chr6	+	26126799	26127778	True	NM_003526,NM_003512	chr6,chr6	-,+	HIST1H2BC,HIST1H2AC	-2667,-2477
chr1:85932610-85932857	chr1	+	85932839	85932911	True	NM_001554,NM_012137	chr1,chr1	+,-	CYR61,DDAH1	113532,-1950
chr7:20256994-20258686	chr7	+	20257124	20258576	True	NM_182762,NM_002214	chr7,chr7	-,+	MACC1,ITGB8	-111,112148
chr7:142635500-142636139	chr7	+	142635555	142636155	True	NM_019841,NM_178829	chr7,chr7	-,+	TRPV5,C7orf34	-4735,447
chr17:48554281-48554696	chr17	+	48554505	48554577	True	NM_018346,NM_001267	chr17,chr17	+,-	RSAD1,CHAD	1612,-8278
chr22:50526075-50526342	chr22	+	50526180	50526364	True	NM_139202,NM_018995,NM_015166,NM_001164105,NM_001164104	chr22,chr22,chr22,chr22,chr22	-,+,-,+,+	MLC1,MOV10L1,MLC1,MOV10L1,MOV10L1	-2399,2070,-1822,2320,2070
chr18:3453123-3453340	chr18	+	3453215	3453354	True	NM_019856,NM_173211,NM_173210,NM_003244,NM_170695,NM_173208,NM_173209,NM_173207	chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18	-,+,+,+,+,+,+,+	MYOM1,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1	-233109,417,-1675,-3094,-1675,-3235,-3293,-5658
chr3:147124094-147125004	chr3	+	147124285	147125035	True	NM_001168378,NM_001168379,NM_032153,NM_003412	chr3,chr3,chr3,chr3	-,-,-,+	ZIC4,ZIC4,ZIC4,ZIC1	-2214,-978,2,2145
chr9:84702535-84703634	chr9	+	84702656	84703564	True	NM_005077,NM_001001670	chr9,chr9	-,+	TLE1,FAM75D1	-399060,-99020
chr2:65287670-65288589	chr2	+	65287725	65288443	True	NM_004161,NM_015147	chr2,chr2	-,+	RAB1A,CEP68	69042,-4282
chr2:33149578-33150129	chr2	+	33149605	33149985	True	NM_021209,NR_027097	chr2,chr2	-,+	NLRC4,LOC100271832	-658793,2208
chr2:23656202-23656681	chr2	+	23656215	23656487	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	493507,-47968
chr15:50391241-50391635	chr15	+	50391319	50391468	True	NM_001159629,NM_024837	chr15,chr15	+,-	SLC27A2,ATP8B4	82924,20006
chr19:52871173-52872335	chr19	+	52871584	52872307	True	NM_001102657,NM_001145434	chr19,chr19	-,+	ZNF836,ZNF880	-196688,862
chr11:57433757-57434541	chr11	+	57433994	57434442	True	NM_145008,NM_015457,NM_001142597,NM_006831	chr11,chr11,chr11,chr11	-,+,+,+	YPEL4,ZDHHC5,CLP1,CLP1	-16577,1031,-8840,-8840
chr17:35989915-35990762	chr17	+	35989928	35990441	True	NM_007010,NM_007026	chr17,chr17	-,+	DDX52,DUSP14	13107,-140028
chr13:53193978-53194927	chr13	+	53194247	53194871	True	NM_001011724,NM_001011725,NM_001011705	chr13,chr13,chr13	+,+,-	HNRNPA1L2,HNRNPA1L2,LECT1	-2701,-2701,119126
chr4:110360546-110360749	chr4	+	110360545	110360634	True	NM_032518,NM_001042734,NM_006323	chr4,chr4,chr4	-,+,+	COL25A1,SEC24B,SEC24B	-136746,-5625,-5625
chr14:21573746-21574746	chr14	+	21573936	21574661	True	NM_016423,NM_001101672,NM_001146683,NM_001102454	chr14,chr14,chr14,chr14	-,-,+,-	ZNF219,ZNF219,C14orf176,ZNF219	-7128,-6763,-6899,-1073
chr20:44048057-44048984	chr20	+	44048312	44048904	True	NM_001184729,NM_001184728,NM_015937,NM_014477,NM_001184730	chr20,chr20,chr20,chr20,chr20	+,+,+,-,+	PIGT,PIGT,PIGT,TP53TG5,PIGT	-3656,-3656,-3656,-41355,-3656
chr11:6625139-6625355	chr11	+	6625188	6625320	True	NM_015324,NM_001014794,NM_001014795,NM_004517,NM_006284	chr11,chr11,chr11,chr11,chr11	-,+,+,+,-	RRP8,ILK,ILK,ILK,TAF10	-377,-275,-32,-275,8175
chr5:56594082-56594538	chr5	+	56594124	56594574	True	NM_001127236,NM_001017992	chr5,chr5	+,-	GPBP1,ACTBL2	-84274,184112
chr16:57025197-57025581	chr16	+	57025218	57025296	True	NM_024946,NM_032206	chr16,chr16	-,+	FAM192A,NLRC5	194732,-1861
chr5:132163230-132164744	chr5	+	132163418	132164514	True	NM_001172700,NM_175873,NM_133456	chr5,chr5,chr5	-,+,-	SHROOM1,ANKRD43,SHROOM1	2126,-14436,-1416
chrX:71264376-71265475	chrX	+	71264462	71265317	True	NR_002309,NM_001024455	chrX,chrX	+,-	RPS26P11,RGAG4	-254,86484
chr8:70853129-70854818	chr8	+	70853354	70854862	True	NM_001128206,NM_030958	chr8,chr8	+,-	SULF1,SLCO5A1	-448385,-106055
chr9:74980256-74980735	chr9	+	74980358	74980600	True	NM_138691,NM_001102420,NM_001102421,NM_006007	chr9,chr9,chr9,chr9	+,-,-,-	TMC1,ZFAND5,ZFAND5,ZFAND5	156116,-195,-195,-195
chrX:136112713-136113173	chrX	+	136112721	136113221	True	NM_054021,NM_000074	chrX,chrX	-,+	GPR101,CD40LG	662,-382436
chr4:121829779-121831376	chr4	+	121829953	121831297	True	NM_018699,NR_024365	chr4,chr4	-,+	PRDM5,LOC100192379	12777,854442
chr6:13614999-13615242	chr6	+	13615016	13615288	True	NM_016167,NM_005493	chr6,chr6	+,-	NOL7,RANBP9	270,96558
chr5:6867722-6868865	chr5	+	6867731	6868915	True	NM_001171806,NR_036242	chr5,chr5	+,-	PAPD7,MIR4278	-121681,-39697
chr3:88107271-88107591	chr3	+	88107346	88107533	True	NM_001008390,NM_003663,NM_000866	chr3,chr3,chr3	-,-,+	CGGBP1,CGGBP1,HTR1F	663,663,-75674
chr9:33078573-33080501	chr9	+	33078740	33079774	True	NM_001539,NM_018225	chr9,chr9	+,-	DNAJA1,SMU1	-53589,-2026
chrX:16889705-16891471	chrX	+	16889885	16891399	True	NM_001198719,NM_002893,NM_001080975	chrX,chrX,chrX	-,-,+	RBBP7,RBBP7,REPS2	-1907,-1351,73414
chr16:67562197-67562584	chr16	+	67562229	67562537	True	NM_001138,NM_001193524,NM_001193523,NM_001193522,NM_024519	chr16,chr16,chr16,chr16,chr16	-,+,+,+,+	AGRP,FAM65A,FAM65A,FAM65A,FAM65A	-44513,8827,1002,182,179
chr3:101232349-101233454	chr3	+	101232390	101233038	True	NM_001077203,NM_020654,NR_036433	chr3,chr3,chr3	-,-,+	SENP7,SENP7,FAM172B	-305,-305,4677
chr16:212797-214274	chr16	+	213093	214043	True	NM_001077350,NM_001003938,NM_000517	chr16,chr16,chr16	-,+,+	NPRL3,HBM,HBA2	-24421,1929,8802
chr16:212797-214274	chr16	+	202955	203453	False	NM_001077350,NM_005332	chr16,chr16	-,+	NPRL3,HBZ	-14283,-152
chr3:50608714-50609155	chr3	+	50608718	50608976	True	NM_016173,NM_001171743,NM_016210,NM_001171741,NM_001171740	chr3,chr3,chr3,chr3,chr3	+,-,-,-,-	HEMK1,C3orf18,C3orf18,C3orf18,C3orf18	-1860,-3495,-3495,-260,-3495
chr1:45963525-45964854	chr1	+	45964082	45964804	True	NM_007170,NR_033297,NR_033296,NR_033298,NM_015506	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	TESK2,CCDC163P,CCDC163P,CCDC163P,MMACHC	-7242,997,997,997,1051
chr7:99911814-99913154	chr7	+	99911902	99912236	True	NM_001004351,NR_003613	chr7,chr7	+,-	SPDYE3,PMS2P1	-6628,21744
chr7:99911814-99913154	chr7	+	99906344	99910844	False	NM_001004351,NR_003613	chr7,chr7	+,-	SPDYE3,PMS2P1	-1070,23136
chr1:160713161-160714738	chr1	+	160713277	160714767	True	NM_021181,NM_001778	chr1,chr1	+,-	SLAMF7,CD48	-4251,-31692
chr16:86545762-86546045	chr16	+	86545843	86545987	True	NM_001451,NR_036444,NR_033925	chr16,chr16,chr16	+,-,-	FOXF1,LOC400550,LOC400550	-1761,-3377,-3377
chr10:103825725-103825983	chr10	+	103825745	103826019	True	NM_024747,NM_024541	chr10,chr10	+,-	HPS6,C10orf76	-672,-9813
chr6:106546013-106546752	chr6	+	106546024	106546767	True	NM_182907,NM_004849	chr6,chr6	+,-	PRDM1,ATG5	47,226978
chrX:135577783-135578203	chrX	+	135577788	135578234	True	NM_001163280,NM_001727,NM_014500,NM_001173516	chrX,chrX,chrX,chrX	+,+,+,-	HTATSF1,BRS3,HTATSF1,MAP7D3	1003,-7715,1436,-239147
chr15:43517196-43517671	chr15	+	43517263	43517708	True	NM_000119,NM_001114134,NM_037370	chr15,chr15,chr15	-,-,+	EPB42,EPB42,CCNDBP1	-3940,-3940,-39183
chr19:36389592-36390077	chr19	+	36389666	36390126	True	NM_001007469,NM_003332,NM_001173514,NM_001173515,NR_033390,NM_198125,NM_139239,NM_014266	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,-,-,-,-,-,+	HCST,TYROBP,TYROBP,TYROBP,TYROBP,TYROBP,NFKBID,HCST	3255,9135,9135,9135,9135,9135,1476,3255
chr1:19227367-19228242	chr1	+	19227366	19228262	True	NM_170726,NM_001161504,NM_003748,NM_001135254	chr1,chr1,chr1,chr1	-,-,-,+	ALDH4A1,ALDH4A1,ALDH4A1,PAX7	1082,-9981,1082,-269917
chr14:94253750-94253957	chr14	+	94253753	94253877	True	NM_138344,NM_178013	chr14,chr14	+,-	FAM181A,PRIMA1	131380,939
chr9:21802871-21803168	chr9	+	21802912	21803184	True	NM_058197,NM_002451	chr9,chr9	-,+	CDKN2A,MTAP	171692,-328
chr1:41841556-41843291	chr1	+	41841669	41843059	True	NM_001956,NR_037868	chr1,chr1	-,+	EDN2,LOC100507178	107335,-361458
chr8:144375744-144376541	chr8	+	144375860	144376556	True	NM_030895,NM_052963	chr8,chr8	+,-	ZNF696,TOP1MT	-2358,40544
chr5:78534779-78535349	chr5	+	78534842	78535355	True	NM_013391,NM_152405	chr5,chr5	-,+	DMGDH,JMY	-169393,-2975
chr19:46729598-46729842	chr19	+	46729661	46729825	True	NM_198541,NM_207393	chr19,chr19	+,-	IGFL1,IGFL3	3183,-101730
chr19:46729598-46729842	chr19	+	46714437	46714499	False	NR_027003,NM_207393	chr19,chr19	+,-	DKFZp434J0226,IGFL3	-989,-86506
chr16:10835525-10836223	chr16	+	10835635	10836212	True	NM_002484,NM_144674	chr16,chr16	+,-	NUBP1,TEKT5	1485,-46833
chr3:134202606-134202943	chr3	+	134202616	134202900	True	NM_025180,NM_001042400,NM_001042384,NM_015391,NM_001042383,NR_024400,NR_024401	chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,-,+,-,-	CEP63,CEP63,CEP63,ANAPC13,CEP63,ANAPC13,ANAPC13	2146,1996,1674,2013,1674,2015,1981
chr11:72853756-72853998	chr11	+	72853779	72854021	True	NM_014824,NM_002564	chr11,chr11	-,+	FCHSD2,P2RY2	-636,75322
chr22:44570237-44570721	chr22	+	44570274	44570722	True	NR_024426,NR_024427,NM_022141,NM_001099294,NM_001137605,NM_001137606,NR_024428	chr22,chr22,chr22,chr22,chr22,chr22,chr22	+,+,+,-,+,+,+	PARVG,PARVG,PARVG,KIAA1644,PARVG,PARVG,PARVG	6047,-1489,6047,138059,-1489,6534,6493
chr4:49327274-49327867	chr4	+	49327532	49327782	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-339326,-418717
chr4:49327274-49327867	chr4	-	49286514	49286764	False	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-298314,-377699
chr5:472686-472933	chr5	+	472753	472827	True	NM_007277,NR_024158	chr5,chr5	+,-	EXOC3,LOC25845	-29470,303
chr19:55768531-55768845	chr19	+	55768561	55768863	True	NM_032430,NM_014931	chr19,chr19	+,-	BRSK1,PPP6R1	26670,1225
chr7:102390527-102391519	chr7	+	102390539	102391289	True	NM_032959,NR_026879,NM_001145269,NM_001145268	chr7,chr7,chr7,chr7	-,+,+,+	POLR2J2,FAM185A,FAM185A,FAM185A	-78357,-1196,-1196,-1196
chr7:102390527-102391519	chr7	-	76750391	76750449	False	NM_020879,NM_006682	chr7,chr7	+,-	CCDC146,FGL2	1484,78759
chr7:155249744-155249946	chr7	+	155249748	155249944	True	NM_001103176,NM_001427	chr7,chr7	-,+	CNPY1,EN2	76645,879
chr7:1783569-1783872	chr7	+	1783574	1783882	True	NM_001134340,NM_001128636	chr7,chr7	-,+	PSMG3,ELFN1	-173906,-34827
chr4:1724277-1724484	chr4	+	1724394	1724478	True	NM_001127266,NM_006342,NM_138385	chr4,chr4,chr4	-,+,-	TMEM129,TACC3,TMEM129	-1310,-1179,-1310
chr5:140187387-140188128	chr5	+	140187415	140187913	True	NM_031500,NM_031497,NM_018907,NM_018906,NM_002109	chr5,chr5,chr5,chr5,chr5	+,+,+,+,-	PCDHA4,PCDHA3,PCDHA4,PCDHA3,HARS	-794,-6683,-794,-6683,-116444
chr2:6993374-6993716	chr2	+	6993415	6993754	True	NM_207315,NM_080657	chr2,chr2	-,+	CMPK2,RSAD2	12243,24041
chr6:33715329-33715725	chr6	+	33715552	33715726	True	NM_001142883,NM_054111,NM_002224	chr6,chr6,chr6	-,-,+	IP6K3,IP6K3,ITPR3	-790,-790,-126447
chr5:695468-695701	chr5	+	695521	695669	True	NM_018140,NM_007030	chr5,chr5	+,-	CEP72,TPPP	-83168,-2011
chr5:695468-695701	chr5	+	786853	786935	False	NM_001166260,NM_024786	chr5,chr5	+,-	TRIP13,ZDHHC11	106033,64216
chr7:100965185-100965945	chr7	+	100965488	100965974	True	NM_001130821,NM_001130820,NM_022777,NM_001130822,NM_133457	chr7,chr7,chr7,chr7,chr7	-,-,-,-,+	RABL5,RABL5,RABL5,RABL5,EMID2	-395,-395,-395,-395,40147
chr19:40336427-40336876	chr19	+	40336528	40336756	True	NM_001143832,NM_001436	chr19,chr19	+,-	LEUTX,FBL	-69345,348
chr20:23965972-23966357	chr20	+	23966108	23966388	True	NM_178312,NM_178311,NR_001279	chr20,chr20,chr20	-,-,+	GGTLC1,GGTLC1,CSTT	1174,3078,-466376
chr16:10837966-10838182	chr16	+	10837995	10838221	True	NM_002484,NM_144674	chr16,chr16	+,-	NUBP1,TEKT5	-348,-49193
chr14:64969375-64969860	chr14	+	64969469	64969851	True	NM_006977,NM_001123329,NM_014950	chr14,chr14,chr14	-,+,+	ZBTB25,ZBTB1,ZBTB1	753,1440,1440
chr1:48244260-48244917	chr1	+	48244337	48244885	True	NM_001194986,NM_004474	chr1,chr1	-,+	LOC388630,FOXD2	217727,-342699
chr13:79175672-79175911	chr13	+	79175697	79175891	True	NM_006237,NM_144595	chr13,chr13	-,+	POU4F1,SLAIN1	1854,-860453
chr2:65281833-65282587	chr2	+	65281939	65282615	True	NM_004161,NM_015147	chr2,chr2	-,+	RAB1A,CEP68	74870,879
chr19:47217542-47217745	chr19	+	47217625	47217687	True	NM_001079882,NM_001039885,NM_001079880,NM_001079881,NM_016457,NR_036157	chr19,chr19,chr19,chr19,chr19,chr19	-,+,-,-,-,-	PRKD2,FKRP,PRKD2,PRKD2,PRKD2,MIR320E	-48,31615,2747,2747,2747,-5023
chr11:16347981-16349439	chr11	+	16348375	16349453	True	NM_001145819,NM_014267	chr11,chr11	-,+	SOX6,C11orf58	75010,410694
chr7:45150120-45150665	chr7	+	45150261	45150549	True	NM_030900,NM_199122,NR_002990,NR_002919,NR_002991,NM_004749,NM_005856	chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,-,+	TBRG4,TBRG4,SNORA5B,SNORA5A,SNORA5C,TBRG4,RAMP3	818,818,-4563,-6180,-5620,818,46817
chr1:181008234-181008721	chr1	+	181008235	181008581	True	NM_005819,NM_001531,NM_001195000,NM_001195035,NM_001194999	chr1,chr1,chr1,chr1,chr1	-,+,+,+,+	STX6,MR1,MR1,MR1,MR1	-16189,-5725,-5725,-5725,-5725
chr17:4545698-4545911	chr17	+	4545739	4545946	True	NM_001140,NM_001114974	chr17,chr17	-,+	ALOX15,SMTNL2	-779,-57958
chr19:38894831-38895166	chr19	+	38894837	38895184	True	NM_152657,NM_174905	chr19,chr19	-,+	GGN,FAM98C	-16169,-1113
chr7:99103879-99104396	chr7	+	99104001	99104285	True	NM_014569,NM_145102,NM_032164	chr7,chr7,chr7	+,+,-	ZKSCAN5,ZKSCAN5,ZNF394	-1479,-1779,-6124
chr15:74497130-74498339	chr15	+	74497348	74498286	True	NM_001199042,NM_001199040,NM_022369,NM_001142619,NM_001142618,NM_001142617,NM_001142620,NM_201526,NM_025055,NM_001199041	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,-,-,-,-,-,+,+,-	STRA6,STRA6,STRA6,STRA6,STRA6,STRA6,STRA6,ISLR,CCDC33,STRA6	-2128,3810,-2128,3135,-1792,3135,3135,-30494,30380,2159
chrX:53202429-53203341	chrX	+	53203038	53203298	True	NM_022117,NM_001146702	chrX,chrX	+,-	TSPYL2,KDM5C	-91560,51366
chr19:1402855-1403098	chr19	+	1402897	1402963	True	NM_138924,NM_018959,NM_170711,NM_000156	chr19,chr19,chr19,chr19	-,+,+,-	GAMT,DAZAP1,DAZAP1,GAMT	-1345,4620,4620,-1345
chr10:116444942-116446546	chr10	+	116444985	116445965	True	NM_001003408,NM_020940,NM_001003407	chr10,chr10,chr10	-,+,-	ABLIM1,FAM160B1,ABLIM1	-571,135537,-571
chr1:156023940-156024580	chr1	+	156023952	156024507	True	NM_020131,NM_014017,NM_001145264,NM_020387	chr1,chr1,chr1,chr1	-,+,+,+	UBQLN4,LAMTOR2,LAMTOR2,RAB25	-436,9,9,6458
chr17:29892802-29893042	chr17	+	29892801	29892999	True	NR_029710,NR_029856,NM_014210	chr17,chr17,chr17	+,+,-	MIR193A,MIR365-2,EVI2A	-5837,9430,-244034
chr20:44096676-44097714	chr20	+	44096956	44097696	True	NM_006103,NM_006652	chr20,chr20	+,-	WFDC2,SPINT3	697,46618
chr1:148930940-148931173	chr1	+	148930940	148931204	True	NR_027355,NR_027354,NM_001024599,NR_027356	chr1,chr1,chr1,chr1	+,+,-,+	LOC645166,LOC645166,HIST2H2BF,LOC645166	-2705,-586,468075,-2705
chr5:146832204-146832841	chr5	+	146832319	146832765	True	NM_001387,NM_001112724	chr5,chr5	-,+	DPYSL3,STK32A	545,-217791
chrX:48825784-48826100	chrX	+	48825788	48826142	True	NM_001167992,NM_004979	chrX,chrX	+,-	PQBP1,KCND1	-70064,2159
chr14:22104939-22105295	chr14	+	22105029	22105103	True	NM_001001912,NM_001005466	chr14,chr14	+,-	OR4E2,OR10G2	28193,-2031
chr4:157892011-157892540	chr4	+	157892071	157892546	True	NM_000824,NM_016205,NR_036641	chr4,chr4,chr4	+,-,-	GLRB,PDGFC,PDGFC	104730,50,50
chr6:28136452-28137451	chr6	+	28136535	28137418	True	NR_002936,NM_001145129	chr6,chr6	-,+	LOC222699,ZNF389	49348,-7048
chr3:127314509-127315679	chr3	+	127314555	127315597	True	NM_001142646,NM_004526,NM_001136053	chr3,chr3,chr3	-,+,-	TPRA1,MCM2,TPRA1	-4987,1655,-5059
chr12:76955091-76955984	chr12	+	76955095	76956029	True	NM_020841,NM_001003712,NM_015336	chr12,chr12,chr12	-,-,+	OSBPL8,OSBPL8,ZDHHC17	-1506,-1506,201824
chr12:130822002-130822208	chr12	+	130822102	130822166	True	NR_033834,NM_004764,NM_001190971	chr12,chr12,chr12	-,+,+	FLJ31485,PIWIL1,PIWIL1	-175879,266,266
chr2:34286664-34286877	chr2	+	34286709	34286925	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-547824,-333425
chr17:3373066-3373763	chr17	+	3373086	3373722	True	NM_001170696,NM_001170697,NM_001170695,NM_001170698,NM_001170699,NM_000049,NM_032598,NM_001128085	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,+,-,+	SPATA22,SPATA22,SPATA22,SPATA22,SPATA22,ASPA,SPATA22,ASPA	1470,1454,1470,1427,1395,5573,1369,3681
chr8:41750509-41751838	chr8	+	41750708	41751859	True	NM_001134296,NM_001142446	chr8,chr8	+,-	AP3M2,ANK1	258604,2471
chr11:101926003-101926494	chr11	+	101926002	101926069	True	NM_178127,NM_032930,NM_001195005	chr11,chr11,chr11	-,+,+	ANGPTL5,C11orf70,C11orf70	-138749,-7893,-7893
chr22:37584016-37585177	chr22	+	37584257	37585214	True	NM_013385,NM_182486,NM_031910	chr22,chr22,chr22	+,-,-	CYTH4,C1QTNF6,C1QTNF6	93280,73,73
chr20:23970203-23970475	chr20	+	23970231	23970327	True	NM_178312,NM_178311,NR_001279	chr20,chr20,chr20	-,-,+	GGTLC1,GGTLC1,CSTT	-2719,-815,-470499
chrX:70934604-70935157	chrX	+	70934715	70935189	True	NR_034005,NM_001145140,NM_001145139	chrX,chrX,chrX	+,-,-	FLJ46446,CXorf49,CXorf49B	-17720,2996,2996
chrX:70934604-70935157	chrX	-	70986085	70986559	False	NR_001568,NM_001145140,NM_001145139	chrX,chrX,chrX	-,+,+	BCYRN1,CXorf49,CXorf49B	-37123,-2996,-2996
chr8:77595559-77596186	chr8	+	77595666	77596224	True	NR_024360,NM_024721	chr8,chr8	-,+	LOC100192378,ZFHX4	-156,-2202
chr10:98593471-98594698	chr10	+	98593564	98594646	True	NM_032440,NM_001170766,NM_152309,NM_001170765	chr10,chr10,chr10,chr10	+,+,-,+	LCOR,LCOR,PIK3AP1,LCOR	-903,-1598,-113285,-1598
chr1:175941759-175942127	chr1	+	175941893	175941981	True	NM_021936,NR_002998	chr1,chr1	+,-	PAPPA2,SCARNA3	490325,-4217
chr4:15351341-15352431	chr4	+	15351390	15352357	True	NM_001135170,NM_001193534	chr4,chr4	+,-	C1QTNF7,FBXL5	-9888,304728
chr2:103344471-103344743	chr2	+	103344488	103344762	True	NM_144632,NM_032718	chr2,chr2	+,-	TMEM182,MFSD9	33727,8625
chr17:54990423-54990629	chr17	+	54990512	54990601	True	NM_021626,NM_005082	chr17,chr17	+,-	SCPEP1,TRIM25	64866,859
chr6:117913384-117914232	chr6	+	117913603	117914249	True	NM_020399,NM_138459,NM_001017408	chr6,chr6,chr6	-,+,-	GOPC,NUS1,GOPC	9518,82367,9518
chr10:7658188-7658529	chr10	+	7658187	7658496	True	NM_002216,NM_032817	chr10,chr10	+,-	ITIH2,ITIH5	86739,3195
chr9:4738862-4739651	chr9	+	4739103	4739658	True	NM_001199855,NM_001199854,NM_005772,NM_001199853,NM_001199852,NM_016282	chr9,chr9,chr9,chr9,chr9,chr9	-,-,+,-,-,-	AK3,AK3,RCL1,AK3,AK3,AK3	2198,1552,53175,2442,1708,1708
chr1:26559348-26559730	chr1	+	26559348	26559648	True	NM_022778,NM_001077262	chr1,chr1	+,-	CCDC21,UBXN11	1044,73605
chr1:65213821-65215187	chr1	+	65213879	65215235	True	NM_002227,NM_018211	chr1,chr1	-,+	JAK1,RAVER2	217002,-3152
chr10:43905998-43906385	chr10	+	43906102	43906394	True	NM_001098206,NR_026693,NM_001098204,NM_001098205,NM_004966	chr10,chr10,chr10,chr10,chr10	-,+,-,-,-	HNRNPF,ZNF487P,HNRNPF,HNRNPF,HNRNPF	-2803,26179,-1406,-1770,-1446
chr9:125030513-125031164	chr9	+	125030522	125031120	True	NR_027126,NM_001173512,NR_027125,NM_033117,NM_138777,NM_199177	chr9,chr9,chr9,chr9,chr9,chr9	-,+,-,-,+,+	RBM18,MRRF,RBM18,RBM18,MRRF,MRRF	-3379,-3691,-3379,-3379,-3691,2022
chr3:52029680-52029902	chr3	+	52029760	52029906	True	NM_000992,NM_001198898	chr3,chr3	-,+	RPL29,ACY1	102,-12511
chr10:114614672-114614888	chr10	+	114614698	114614936	True	NM_022494,NR_015409	chr10,chr10	-,+	ZDHHC6,LOC143188	-408026,-4076
chr8:21769250-21769454	chr8	+	21769405	21769473	True	NM_003974,NM_015024	chr8,chr8	-,+	DOK2,XPO7	1782,7706
chr4:120145313-120146755	chr4	+	120145448	120146528	True	NM_001001701,NM_019050	chr4,chr4	-,+	C4orf3,USP53	75498,-11725
chr3:24520226-24520509	chr3	+	24520252	24520437	True	NM_001145425,NM_001128176	chr3,chr3	+,-	NR1D2,THRB	-532698,15886
chr7:1610253-1610528	chr7	+	1610273	1610378	True	NM_001134340,NR_021487,NM_032302,NR_027328,NR_027329	chr7,chr7,chr7,chr7,chr7	-,+,-,+,+	PSMG3,KIAA1908,PSMG3,KIAA1908,KIAA1908	-605,-615,-644,-615,-615
chr6:125318251-125319125	chr6	+	125318447	125319095	True	NR_026876,NM_152553	chr6,chr6	-,+	STL,RNF217	-34274,-13991
chr16:1966420-1966925	chr16	+	1966548	1966730	True	NM_001009606,NM_004548	chr16,chr16	-,+	HS3ST6,NDUFB10	1551,42786
chr19:35783796-35784003	chr19	+	35783818	35784016	True	NM_001199216,NM_152481,NM_080600,NM_002361	chr19,chr19,chr19,chr19	+,-,+,+	MAG,FAM187B,MAG,MAG	-887,-64190,-887,-887
chr2:86249095-86249996	chr2	+	86249126	86249652	True	NM_017952,NR_026984	chr2,chr2	+,-	PTCD3,LOC90784	83652,1389
chr6:35709793-35710127	chr6	+	35709912	35710001	True	NR_027117,NM_145028	chr6,chr6	-,+	LOC285847,C6orf81	-5188,-5105
chr18:29166130-29166853	chr18	+	29166324	29166869	True	NM_004775,NM_000371	chr18,chr18	-,+	B4GALT6,TTR	97867,4860
chr8:27849591-27850126	chr8	+	27849653	27850163	True	NM_173833,NM_018091	chr8,chr8	-,+	SCARA5,ELP3	256,100420
chrX:16142184-16143047	chrX	+	16142218	16143080	True	NM_005314,NM_003916	chrX,chrX	+,-	GRPR,AP1S2	-852,-269118
chr2:158722279-158723074	chr2	+	158722422	158722936	True	NM_001105,NM_001111067,NM_001135098	chr2,chr2,chr2	-,-,+	ACVR1,ACVR1,UPP2	8738,9489,128754
chr19:463223-463458	chr19	+	463317	463421	True	NM_012435,NM_130760	chr19,chr19	-,+	SHC2,MADCAM1	-2321,33068
chr3:125684767-125685808	chr3	+	125684926	125685848	True	NM_001012337,NM_001195223	chr3,chr3	+,-	ROPN1B,ALG1L	2179,-29039
chr7:12609405-12610301	chr7	+	12609662	12610162	True	NM_001112706,NM_001135924	chr7,chr7	+,-	SCIN,VWDE	40,-165810
chr16:1278082-1278412	chr16	+	1278094	1278380	True	NM_012467,NM_024164,NM_003294	chr16,chr16,chr16	-,-,+	TPSG1,TPSB2,TPSAB1	-2840,1855,12297
chr16:1278082-1278412	chr16	-	1292510	1292796	False	NM_024164,NM_003294	chr16,chr16	-,+	TPSB2,TPSAB1	-12325,-1883
chr6:32297859-32299468	chr6	+	32297864	32297936	True	NM_019111,NM_006781	chr6,chr6	+,-	HLA-DRA,C6orf10	109682,41770
chr6:32297859-32299468	chr6_mann_hap4	+	3640703	3640775	False	NM_019111,NM_006781	chr6_mann_hap4,chr6_mann_hap4	+,-	HLA-DRA,C6orf10	108903,41770
chr13:48666541-48667058	chr13	+	48666627	48667043	True	NM_018283,NM_014166	chr13,chr13	+,-	NUDT15,MED4	-54981,2247
chr12:95604035-95605474	chr12	+	95604056	95604974	True	NM_017599,NM_018351	chr12,chr12	+,-	VEZT,FGD6	6547,6316
chr1:44678015-44679090	chr1	+	44678158	44679124	True	NM_019100,NM_001034023,NM_001034024,NM_024066	chr1,chr1,chr1,chr1	+,+,+,-	DMAP1,DMAP1,DMAP1,ERI3	0,0,0,141865
chr6:14922378-14922723	chr6	+	14922457	14922663	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	323863,740676
chr10:71080525-71081300	chr10	+	71080557	71081167	True	NM_033496,NM_001057,NM_000188	chr10,chr10,chr10	+,-,+	HK1,TACR2,HK1	-4998,95557,-2005
chr12:49758266-49759829	chr12	+	49758410	49759586	True	NM_001008223,NM_023071	chr12,chr12	-,+	C1QL4,SPATS2	-27439,1101
chr1:186649690-186649924	chr1	+	186649835	186649927	True	NM_024420,NM_000963	chr1,chr1	+,-	PLA2G4A,PTGS2	148104,-276
chr11:73717388-73718936	chr11	+	73717528	73718790	True	NM_022803,NM_003356,NM_153614	chr11,chr11,chr11	-,-,+	UCP3,UCP3,DNAJB13	1542,1542,-56215
chr5:137705712-137707656	chr5	+	137706060	137707605	True	NM_022809,NM_016604	chr5,chr5	-,+	CDC25C,KDM3B	-38544,-17829
chr10:95323908-95325026	chr10	+	95324427	95324935	True	NM_001195755,NM_181745,NM_006744	chr10,chr10,chr10	+,+,-	O3FAR1,O3FAR1,RBP4	1486,1486,36108
chr1:155533237-155533905	chr1	+	155533298	155533930	True	NR_027023,NM_018489	chr1,chr1	+,-	LOC645676,ASH1L	-1577,-974
chr1:155533237-155533905	chr1	+	155659143	155659193	False	NM_001199849,NM_001198903,NM_001198899,NM_004632,NM_018253,NM_001198902,NM_033657,NM_001199851,NM_001199850,NM_139121,NM_001198900,NM_001198901,NM_139118,NM_139119,NM_001198904,NM_001198905,NM_001198906	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,+,-,-,+,+,+,-,-,-,-,-,-,-,-	DAP3,YY1AP1,YY1AP1,DAP3,YY1AP1,YY1AP1,DAP3,DAP3,DAP3,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1	-312,-696,-9523,-309,-575,-628,-309,-312,-312,-379,-575,-324,-320,-578,-696,-575,-320
chr1:236305170-236305381	chr1	+	236305260	236305328	True	NM_002508,NM_003272	chr1,chr1	-,+	NID1,GPR137B	-76779,503
chr10:35635761-35636852	chr10	+	35635973	35636867	True	NM_001198777,NM_145012	chr10,chr10	-,+	CUL2,CCNY	-256403,-10229
chr22:24201969-24203123	chr22	+	24202005	24202685	True	NM_198440,NM_001024939,NM_001024938,NM_030807	chr22,chr22,chr22,chr22	-,+,+,+	DERL3,SLC2A11,SLC2A11,SLC2A11	-20806,-2018,-3000,-3000
chr19:12661392-12661631	chr19	+	12661491	12661572	True	NM_153358,NM_144976	chr19,chr19	+,-	ZNF791,ZNF564	60159,837
chr16:21512478-21512856	chr16	+	21512522	21512762	True	NM_001077180,NR_027155	chr16,chr16	+,-	METTL9,LOC100271836	98093,890
chr16:21512478-21512856	chr16	-	22449310	22449360	False	NR_027154,NR_027460	chr16,chr16	+,-	LOC641298,RRN3P3	-1032,-274
chr2:229477072-229478404	chr2	+	229477271	229478370	True	NM_178821,NM_030623	chr2,chr2	+,-	WDR69,SPHKAP	-741002,-430910
chr17:53608779-53609807	chr17	+	53608806	53609856	True	NM_021213,NM_012329	chr17,chr17	+,-	PCTP,MMD	218483,-109465
chr17:16694419-16694756	chr17	+	16694468	16694603	True	NR_026810,NR_029392,NR_003190	chr17,chr17,chr17	+,-,+	FAM106C,KRT16P2,LOC162632	-2464,41603,-4315
chr17:16694419-16694756	chr17	+	58253094	58253151	False	NM_000717,NR_002999	chr17,chr17	+,-	CA4,SCARNA20	-25850,55912
chr17:16694419-16694756	chr17	-	18427729	18427864	False	NR_026809,NR_003554,NM_001040078	chr17,chr17,chr17	-,-,+	FAM106A,LOC220594,LGALS9C	2348,-3163,-47690
chr17:16694419-16694756	chr17	+	20323017	20323152	False	NR_023380,NM_001042685	chr17,chr17	+,-	CCDC144C,LGALS9B	-98583,47755
chr2:200776420-200777454	chr2	+	200776519	200777367	True	NM_001039693,NM_153689	chr2,chr2	-,+	C2orf60,C2orf69	43153,-591
chr12:43074057-43075528	chr12	+	43074157	43075568	True	NM_016488,NM_153026	chr12,chr12	+,-	PPHLN1,PRICKLE1	-354265,-90585
chr13:42875222-42875701	chr13	+	42875258	42875696	True	NM_016248,NM_001009814	chr13,chr13	+,-	AKAP11,KIAA0564	-29033,-340037
chr18:77161596-77161805	chr18	+	77161600	77161854	True	NM_006162,NM_172388,NM_172389,NM_172387,NM_001146343,NM_172390	chr18,chr18,chr18,chr18,chr18,chr18	+,+,+,+,-,+	NFATC1,NFATC1,NFATC1,NFATC1,PQLC1,NFATC1	-5879,-5879,-1325,-1325,549849,-5879
chr3:42199505-42199780	chr3	+	42199611	42199829	True	NM_014965,NM_001174138	chr3,chr3	+,-	TRAK1,CCK	1831,105662
chr19:49015626-49016659	chr19	+	49015697	49016553	True	NM_177973,NM_001080434	chr19,chr19	+,-	SULT2B1,LMTK3	38875,-57
chr10:116166982-116167872	chr10	+	116167420	116167768	True	NM_198496,NM_032550,NM_001001936	chr10,chr10,chr10	+,-,-	VWA2,AFAP1L2,AFAP1L2	-168453,-2905,-2905
chr12:69140203-69140490	chr12	+	69140212	69140530	True	NM_018656,NR_033335	chr12,chr12	+,-	SLC35E3,SNORA70G	-330,-119057
chr21:43134379-43134734	chr21	+	43134467	43134717	True	NR_027272,NR_024028	chr21,chr21	-,+	C21orf129,NCRNA00112	1268,1878
chr16:19465754-19467383	chr16	+	19465851	19467177	True	NM_024780,NM_016641	chr16,chr16	+,-	TMC5,GDE1	594,66323
chr1:10061977-10063204	chr1	+	10062210	10062966	True	NM_032368,NM_052960	chr1,chr1	-,+	LZIC,RBP7	-59384,-5015
chr6:112075018-112075316	chr6	+	112075076	112075354	True	NR_034109,NM_153048	chr6,chr6	+,-	LOC643749,FYN	-270458,4981
chr6:31869208-31869419	chr6_qbl_hap6	+	3163030	3163174	False	NM_025256,NM_001178063,NM_181842,NM_006709	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	-,+,-,-	EHMT2,C2,ZBTB12,EHMT2	-3775,-513,439,-3775
chr6:31869208-31869419	chr6_mcf_hap5	+	3249121	3249265	False	NM_025256,NM_001178063,NM_181842,NM_006709	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	-,+,-,-	EHMT2,C2,ZBTB12,EHMT2	-3777,-513,437,-3777
chr6:31869208-31869419	chr6_cox_hap2	+	3378992	3379136	False	NM_025256,NM_001178063,NM_181842,NM_006709	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	-,+,-,-	EHMT2,C2,ZBTB12,EHMT2	-3774,-513,437,-3774
chr6:31869208-31869419	chr6	+	31869238	31869382	True	NM_025256,NM_001178063,NM_181842,NM_006709	chr6,chr6,chr6,chr6	-,+,-,-	EHMT2,C2,ZBTB12,EHMT2	-3774,-513,437,-3774
chr6:31869208-31869419	chr6_dbb_hap3	+	3154820	3154964	False	NM_025256,NM_001178063,NM_181842,NM_006709	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	-,+,-,-	EHMT2,C2,ZBTB12,EHMT2	-3774,-513,437,-3774
chr16:8807569-8808524	chr16	+	8807671	8808485	True	NM_001127448,NM_000663,NM_015421	chr16,chr16,chr16	+,+,-	ABAT,ABAT,TMEM186	6087,-896,83070
chrX:65390507-65392229	chrX	+	65390540	65392156	True	NM_014799,NM_007268,NM_001130860,NM_138737	chrX,chrX,chrX,chrX	+,-,+,+	HEPH,VSIG4,HEPH,HEPH	-6489,-130573,-6519,-8165
chr6:111409111-111409904	chr6	+	111409171	111409929	True	NM_018593,NR_002932	chr6,chr6	+,-	SLC16A10,GSTM2P1	-441,-40414
chr1:171748834-171749374	chr1	+	171749054	171749412	True	NM_001007239,NM_014955,NM_015935,NR_033704	chr1,chr1,chr1,chr1	+,+,+,-	METTL13,METTL13,METTL13,VAMP4	1348,1348,1348,-37675
chr5:115420670-115420894	chr5	+	115420693	115420837	True	NM_016144,NR_033363	chr5,chr5	+,-	COMMD10,ATG12	-17,-243145
chr19:16244362-16245800	chr19	+	16244554	16245456	True	NM_032855,NM_054113	chr19,chr19	+,-	HSH2D,CIB3	233,38880
chr14:24682198-24682447	chr14	+	24682220	24682476	True	NM_174944,NM_001199821,NM_001199822,NM_014169,NM_001184739,NM_138476	chr14,chr14,chr14,chr14,chr14,chr14	+,-,-,-,+,-	TSSK4,MDP1,MDP1,CHMP4A,TSSK4,MDP1	-7352,2850,2850,610,-7352,2850
chr9:137774931-137775567	chr9	+	137775017	137775157	True	NR_037460,NM_015837,NM_004108	chr9,chr9,chr9	-,+,+	MIR3689A,FCN2,FCN2	-32527,-2410,-2410
chr8:102134090-102135619	chr8	+	102134115	102135642	True	NM_001042511,NR_033962	chr8,chr8	-,+	ZNF706,FLJ42969	82281,-69884
chrX:19502733-19503573	chrX	+	19502737	19503616	True	NM_001173456,NM_001001671	chrX,chrX	+,-	PDHA1,MAP3K15	-140777,29813
chr5:140767529-140768219	chr5	+	140767894	140768207	True	NM_018925,NM_018920,NM_003736,NM_032099,NM_032098,NM_032088,NM_005642,NM_014004,NM_032087	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,-,+,+	PCDHGB5,PCDHGA7,PCDHGB4,PCDHGB5,PCDHGB4,PCDHGA8,TAF7,PCDHGA8,PCDHGA7	9487,-5479,-494,9487,-494,3275,-67543,3275,-5479
chr14:93213235-93213690	chr14	+	93213397	93213473	True	NM_005606,NM_005113,NM_001008530	chr14,chr14,chr14	-,+,-	LGMN,GOLGA5,LGMN	1624,47176,1624
chr2:43451294-43451542	chr2	+	43451295	43451591	True	NR_027251,NM_006887	chr2,chr2	+,-	LOC100129726,ZFP36L2	2758,2204
chr2:233569862-233570572	chr2	+	233569884	233569981	True	NM_015575,NM_001172416,NM_001103146,NM_001103147,NM_001103148	chr2,chr2,chr2,chr2,chr2	+,-,+,+,+	GIGYF2,KCNJ13,GIGYF2,GIGYF2,GIGYF2	-7929,71351,-7929,-7929,-7929
chr19:46801697-46801913	chr19	+	46801845	46801935	True	NM_152796,NM_152795,NM_022462,NM_152794,NM_032040	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	HIF3A,HIF3A,HIF3A,HIF3A,CCDC8	-263,-1593,-263,4920,115034
chrX:153169690-153170021	chrX	+	153169833	153169955	True	NM_001164741,NM_001146151,NM_000054,NR_027419	chrX,chrX,chrX,chrX	-,+,+,+	ARHGAP4,AVPR2,AVPR2,AVPR2	21809,573,573,-1899
chr8:54781013-54782090	chr8	+	54781154	54781897	True	NM_003702,NM_213619	chr8,chr8	+,-	RGS20,ATP6V1H	11544,-25304
chr1:91981147-91982848	chr1	+	91981308	91982820	True	NM_001134420,NM_001017975	chr1,chr1	+,-	CDC7,HFM1	-14703,-110882
chr1:167691849-167693687	chr1	+	167691998	167693519	True	NM_003851,NM_024569,NM_001146191,NM_003953	chr1,chr1,chr1,chr1	-,+,+,+	CREG1,MPZL1,MPZL1,MPZL1	-168942,-868,-868,-868
chr16:30937236-30938176	chr16	+	30937322	30938213	True	NM_001099784,NR_024348	chr16,chr16	+,-	FBXL19,FBXL19-AS1	-1477,-2732
chr20:33136920-33137325	chr20	+	33137130	33137276	True	NM_080476,NM_032514,NM_181509	chr20,chr20,chr20	-,+,+	PIGU,MAP1LC3A,MAP1LC3A	127863,9242,-2489
chr1:45989054-45989662	chr1	+	45989131	45989661	True	NM_181696,NM_002574,NM_001202431,NM_015506,NM_181697	chr1,chr1,chr1,chr1,chr1	-,-,-,+,-	PRDX1,PRDX1,PRDX1,MMACHC,PRDX1	-1521,-1521,-569,-23332,-1521
chr12:53597354-53599010	chr12	+	53597540	53598955	True	NM_001004304,NM_000889	chr12,chr12	+,-	ZNF740,ITGB7	-23066,2102
chr15:63452307-63453428	chr15	+	63452570	63453452	True	NM_016530,NM_015920	chr15,chr15	+,-	RAB8B,RPS27L	28275,-2829
chr1:209979663-209980394	chr1	+	209979719	209979971	True	NM_006147,NM_014388	chr1,chr1	-,+	IRF6,DIEXF	-240,21340
chr12:5296753-5297442	chr12	+	5296766	5297477	True	NM_006422,NM_002234	chr12,chr12	-,+	AKAP3,KCNA5	-542423,-143732
chrX:25034194-25034550	chrX	+	25034279	25034503	True	NM_139058,NR_003007	chrX,chrX	-,+	ARX,SCARNA23	-214,-271773
chrX:108718643-108718910	chrX	+	108718647	108718949	True	NM_018698,NM_001522	chrX,chrX	+,-	NXT2,GUCY2F	60060,6386
chr2:34107561-34108160	chr2	+	34107585	34108148	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-368697,-154301
chr20:35274787-35276691	chr20	+	35274796	35276261	True	NM_175077,NM_032214,NR_026562	chr20,chr20,chr20	-,-,+	SLA2,SLA2,C20orf24	-238,-238,-40710
chr4:17617674-17619452	chr4	+	17618082	17619088	True	NM_025205,NM_000320	chr4,chr4	+,-	MED28,QDPR	-1860,-104225
chr11:2923904-2924309	chr11	+	2924121	2924269	True	NM_183233,NM_007105,NM_002555	chr11,chr11,chr11	+,-,+	SLC22A18,SLC22A18AS,SLC22A18	-3221,956,-660
chrX:117857489-117858882	chrX	+	117857596	117858840	True	NM_001560,NM_020721	chrX,chrX	+,-	IL13RA1,KIAA1210	2718,425753
chr7:130375982-130376215	chr7	+	130375994	130376256	True	NR_029899,NM_052933	chr7,chr7	+,-	MIR335,TSGA13	-240094,-4588
chr6:33771785-33772950	chr6	+	33772087	33772961	True	NM_002224,NM_002418,NM_001184698,NM_001040109	chr6,chr6,chr6,chr6	+,-,-,-	ITPR3,MLN,MLN,MLN	-182982,-294,-294,-294
chr8:9408681-9409325	chr8	+	9408727	9409323	True	NM_003747,NR_024281	chr8,chr8	+,-	TNKS,LOC157627	4121,351566
chr7:95400138-95401161	chr7	+	95400331	95400699	True	NM_001135556,NM_001135557,NM_002612,NM_004411	chr7,chr7,chr7,chr7	+,+,-,+	DYNC1I1,DYNC1I1,PDK4,DYNC1I1	1118,1118,-174406,1118
chr12:48513252-48514788	chr12	+	48513514	48514641	True	NM_000289,NM_001166688,NM_014554,NM_001166687	chr12,chr12,chr12,chr12	+,+,-,+	PFKM,PFKM,SENP1,PFKM	-552,1788,-13873,1788
chr6:126335688-126336462	chr6	+	126335739	126336201	True	NM_016063,NM_001031712	chr6,chr6	-,+	HDDC2,TRMT11	-712457,-28214
chr21:37689333-37690684	chr21	+	37689446	37690210	True	NM_012130,NM_015358	chr21,chr21	-,+	CLDN14,MORC3	148566,2276
chr21:47649965-47650932	chr21	+	47650044	47650828	True	NM_001145436,NM_002340,NR_002776,NM_001001438,NM_001145437	chr21,chr21,chr21,chr21,chr21	-,-,+,-,-	LSS,LSS,MCM3AP-AS1,LSS,LSS	-1306,-1306,-945,-1306,-1306
chr19:47354880-47355956	chr19	+	47355655	47355758	True	NM_021575,NM_004069,NM_004491	chr19,chr19,chr19	-,-,+	AP2S1,AP2S1,GRLF1	-1452,-1452,66174
chr7:102314539-102315315	chr7	+	102314665	102315302	True	NM_032959,NM_001166339	chr7,chr7	-,+	POLR2J2,SPDYE2L	-2483,-23944
chr7:102314539-102315315	chr7	+	44061322	44061893	False	NR_015401,NR_003655	chr7,chr7	+,-	FLJ35390,POLR2J4	16804,-2574
chr7:102314539-102315315	chr7	+	102215593	102216229	False	NM_001166339,NM_001097615	chr7,chr7	+,-	SPDYE2L,POLR2J3	-23965,-2525
chr5:76336228-76338174	chr5	+	76336302	76337574	True	NM_018046,NR_003014	chr5,chr5	+,-	AGGF1,SNORA47	-10149,38872
chr1:31537808-31538016	chr1	+	31537817	31538055	True	NM_001020658,NM_014676,NR_002762	chr1,chr1,chr1	-,-,+	PUM1,PUM1,PRO0611	559,559,-76957
chr16:6825253-6826266	chr16	+	6825374	6825988	True	NM_201598,NM_001142334	chr16,chr16	-,+	FAM86A,RBFOX1	-1677585,-1616
chr16:2204906-2205128	chr16	+	2204906	2205108	True	NR_002736,NM_014353,NM_032271	chr16,chr16,chr16	-,+,+	SNORD60,RAB26,TRAF7	48,-6306,690
chr5:92908980-92909950	chr5	+	92909036	92909868	True	NR_021490,NR_021491,NR_015369,NM_005654	chr5,chr5,chr5,chr5	-,-,-,+	FLJ42709,FLJ42709,FLJ42709,NR2F1	7185,7135,-2537,9174
chr1:11941011-11942047	chr1	+	11941032	11942062	True	NM_002521,NR_037806	chr1,chr1	-,+	NPPB,NPPA-AS1	-22040,-40707
chr22:19951321-19951791	chr22	+	19951360	19951818	True	NM_006440,NM_007310	chr22,chr22	-,+	TXNRD2,COMT	-22001,-1341
chr3:44916264-44917070	chr3	+	44916307	44917105	True	NM_003241,NM_001135179	chr3,chr3	+,-	TGM4,ZDHHC3	-266,100619
chr3:178292163-178293932	chr3	+	178292202	178293510	True	NM_022470,NM_005832	chr3,chr3	-,+	ZMAT3,KCNMB2	496196,-15635
chr8:99838310-99838972	chr8	+	99838418	99838892	True	NM_006281,NM_001142462	chr8,chr8	-,+	STK3,OSR2	-509,117738
chr1:180599059-180600482	chr1	+	180599344	180600421	True	NM_001135669,NM_032360,NM_004736	chr1,chr1,chr1	+,-,+	XPR1,ACBD6,XPR1	724,-127322,724
chr6:2246695-2247185	chr6	+	2246768	2247095	True	NM_001500,NM_020135	chr6,chr6	-,+	GMDS,WRNIP1	-922,518570
chr10:82117402-82118855	chr10	+	82117529	82118437	True	NM_138812,NM_032372	chr10,chr10	-,+	DYDC1,DYDC2	-1029,-1030
chr11:58910401-58911296	chr11	+	58910566	58911244	True	NM_198847,NM_001142519,NM_001142520,NM_022074,NM_001142521,NM_001039396	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,-	FAM111A,FAM111A,FAM111A,FAM111A,FAM111A,MPEG1	1007,-299,-299,1007,-299,69308
chr2:9984100-9984437	chr2	+	9984099	9984254	True	NM_006826,NM_005680	chr2,chr2	-,+	YWHAQ,TAF1B	-212993,-579
chr16:852712-853086	chr16	+	852798	853134	True	NM_001013638,NM_016541	chr16,chr16	+,-	PRR25,GNG13	2308,-2065
chr6:74104095-74104718	chr6	+	74104283	74104767	True	NM_001080507,NM_018665	chr6,chr6	-,+	OOEP,DDX43	-24768,-49
chr2:139509830-139510251	chr2	+	139509865	139510291	True	NM_007226,NR_033658	chr2,chr2	-,+	NXPH2,LOC647012	27570,144602
chrX:50648220-50648471	chrX	+	50648329	50648493	True	NM_005448,NR_027121,NR_003933	chrX,chrX,chrX	+,-,+	BMP15,SHROOM4,LOC347376	5241,-91285,-30
chr10:129923183-129923515	chr10	+	129923303	129923467	True	NM_130435,NM_002417,NM_001145966	chr10,chr10,chr10	+,-,-	PTPRE,MKI67,MKI67	-77541,1051,1051
chr19:43430495-43430733	chr19	+	43430501	43430617	True	NM_002782,NM_001031850,NR_036584	chr19,chr19,chr19	-,-,+	PSG6,PSG6,LOC100289650	-8512,-8458,-104537
chr11:111127281-111128698	chr11	+	111127371	111128510	True	NM_198498,NR_034154	chr11,chr11	+,-	C11orf53,C11orf92	-715,42079
chr9:139747050-139747324	chr9	+	139747166	139747312	True	NM_003792,NM_014172,NM_206920,NM_001080482,NM_001135861	chr9,chr9,chr9,chr9,chr9	-,+,+,+,+	EDF1,PHPT1,MAMDC4,C9orf172,PHPT1	13476,-3961,-398,-8350,-3961
chr1:151371504-151372088	chr1	+	151371737	151372045	True	NM_003944,NM_002796	chr1,chr1	-,+	SELENBP1,PSMB4	-26573,-5
chr15:74829068-74830125	chr15	+	74829207	74830162	True	NM_006465,NM_201265	chr15,chr15	+,-	ARID3B,UBL7	3385,-75678
chr11:46403970-46404936	chr11	+	46404112	46404981	True	NM_001012333,NM_002391,NM_001012334,NM_000741	chr11,chr11,chr11,chr11	+,+,+,-	MDK,MDK,MDK,CHRM4	-860,-944,-1545,3176
chr2:228500496-228501913	chr2	+	228500642	228501564	True	NM_020161,NM_004504,NM_001162483	chr2,chr2,chr2	-,+,-	C2orf83,AGFG1,C2orf83	-2606,-163813,-2606
chr14:59656171-59656902	chr14	+	59656368	59656780	True	NM_014992,NM_022571	chr14,chr14	+,-	DAAM1,GPR135	-1020,275329
chr1:65205181-65206031	chr1	+	65205278	65206058	True	NM_002227,NM_018211	chr1,chr1	-,+	JAK1,RAVER2	226181,4719
chrX:52384677-52386498	chrX	+	52384717	52386513	True	NM_130777,NM_001097592,NM_001079538	chrX,chrX,chrX	-,+,-	XAGE2,XAGE1A,XAGE2B	633,125247,-163
chrX:52384677-52386498	chrX	-	52112660	52114456	False	NR_033251,NM_130777,NM_001079538	chrX,chrX,chrX	-,+,+	XAGE1C,XAGE2,XAGE2B	145757,-633,163
chr2:225605791-225606963	chr2	+	225605997	225606967	True	NM_003590,NM_020864	chr2,chr2	-,+	CUL3,KIAA1486	-155887,658634
chr11:36530547-36530903	chr11	+	36530557	36530941	True	NM_145803,NM_000448,NM_004620	chr11,chr11,chr11	-,+,-	TRAF6,RAG1,TRAF6	931,58621,931
chr2:111182715-111183799	chr2	+	111183022	111183714	True	NR_037626,NR_037627,NR_027142,NR_027143	chr2,chr2,chr2,chr2	+,-,-,-	LOC100507334,LOC100288570,LOC440895,LOC440895	-179859,-1629,-1629,-1629
chr2:111182715-111183799	chr2	-	110702944	110703636	False	NR_037627,NR_036225,NR_027142,NR_027143	chr2,chr2,chr2,chr2	+,-,+,+	LOC100288570,MIR4267,LOC440895,LOC440895	1630,124034,1630,1630
chr2:111182715-111183799	chr2	-	111000892	111001584	False	NR_027063,NR_037626	chr2,chr2	-,+	NCRNA00116,LOC100507334	-20375,1630
chr4:166802028-166802315	chr4	+	166802105	166802241	True	NM_001204760,NR_026575,NM_012464	chr4,chr4,chr4	+,-,+	TLL1,GK3P,TLL1	-7753,-600930,-7753
chr1:6422345-6423273	chr1	+	6422550	6422804	True	NM_031475,NM_181865,NM_181866	chr1,chr1,chr1	+,-,-	ESPN,ACOT7,ACOT7	62043,-1786,-3546
chr19:3485153-3485928	chr19	+	3485234	3485940	True	NM_016263,NM_001136503	chr19,chr19	+,-	FZR1,C19orf77	20354,-4694
chr19:6373628-6373990	chr19	+	6373891	6373951	True	NM_004158,NM_032306	chr19,chr19	-,+	PSPN,ALKBH7	1959,-1498
chr1:236848177-236848746	chr1	+	236848437	236848769	True	NM_018072,NM_001103	chr1,chr1	-,+	HEATR1,ACTN2	-80596,1000
chr13:50200549-50201525	chr13	+	50200712	50200906	True	NM_138450,NM_018191	chr13,chr13	+,-	ARL11,RCBTB1	1528,-40993
chr17:40733241-40733935	chr17	+	40733437	40733891	True	NM_016556,NM_198205,NM_013290	chr17,chr17,chr17	-,+,-	PSMC3IP,MLX,PSMC3IP	-3690,-14410,-3690
chr5:178158376-178158722	chr5	+	178158376	178158491	True	NM_005649,NM_058230	chr5,chr5	-,+	ZNF354A,ZNF354B	-673,128462
chr17:5093381-5093954	chr17	+	5093697	5093955	True	NM_032530,NR_034082	chr17,chr17	-,+	ZNF594,LOC100130950	1273,1423
chr10:36811967-36813185	chr10	+	36811966	36812943	True	NM_052997,NM_031866	chr10,chr10	+,-	ANKRD30A,FZD8	601841,-881604
chr1:43317414-43319259	chr1	+	43317806	43319297	True	NM_015911,NM_199342	chr1,chr1	+,-	ZNF691,CCDC23	-5579,-34747
chr4:57046155-57046377	chr4	+	57046216	57046300	True	NM_181806,NM_020722	chr4,chr4	-,+	AASDH,KIAA1211	207388,-9914
chrX:71396470-71398002	chrX	+	71396645	71397757	True	NR_033187,NM_001170747,NM_006223,NM_001024455	chrX,chrX,chrX,chrX	+,+,+,-	PIN4,PIN4,PIN4,RGAG4	3768,3768,3768,-44894
chr2:160146086-160146454	chr2	+	160146175	160146276	True	NM_001128213,NM_001128212,NM_033394,NM_152528	chr2,chr2,chr2,chr2	-,-,+,-	WDSUB1,WDSUB1,TANC1,WDSUB1	-3072,-2939,-321084,-3112
chr1:48288753-48289107	chr1	+	48288896	48289028	True	NM_001194986,NM_004474	chr1,chr1	-,+	LOC388630,FOXD2	173584,-387258
chr1:231957740-231959058	chr1	+	231957763	231958873	True	NM_018662,NR_002227	chr1,chr1	+,-	DISC1,DISC2	-195260,-3500
chr14:94640096-94640365	chr14	+	94640198	94640264	True	NM_032036,NM_058237,NM_020958	chr14,chr14,chr14	-,+,+	IFI27L2,PPP4R4,PPP4R4	-44241,384,384
chr16:2005331-2005639	chr16	+	2005494	2005563	True	NR_003142,NM_005061,NM_002952,NR_002327,NR_002326,NR_003020,NM_004548	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,-,-,+,+	SNHG9,RPL3L,RPS2,SNORA10,SNORA64,SNORA78,NDUFB10	9433,-815,9323,6963,7603,9621,3953
chr11:67193744-67194038	chr11	+	67193795	67193871	True	NM_005608,NM_003952	chr11,chr11	-,+	PTPRCAP,RPS6KB2	11332,2063
chr12:7060130-7060502	chr12	+	7060135	7060463	True	NM_138425,NM_080548,NM_080549,NR_003010,NM_002831	chr12,chr12,chr12,chr12,chr12	+,+,+,-,+	C12orf57,PTPN6,PTPN6,SCARNA12,PTPN6	-6983,-4446,-30,16356,-30
chr14:69259468-69259706	chr14	+	69259591	69259655	True	NM_004926,NM_207442,NM_001193360	chr14,chr14,chr14	-,-,+	ZFP36L1,C14orf181,EXD2	180,3585,398538
chr16:3186125-3186438	chr16	+	3186229	3186392	True	NM_004220,NR_024167,NM_001134655	chr16,chr16,chr16	+,-,+	ZNF213,MGC3771,ZNF213	-1230,-20630,-1153
chr4:115561479-115562007	chr4	+	115561534	115561804	True	NR_030303,NM_022569	chr4,chr4	+,-	MIR577,NDST4	16110,473278
chr22:32026841-32027096	chr22	+	32027025	32027145	True	NM_001007188,NM_014338	chr22,chr22	+,-	DEPDC5,PISD	122923,-215
chr5:176813001-176813357	chr5	+	176813238	176813342	True	NM_001029886,NM_001167579,NM_003052	chr5,chr5,chr5	-,+,+	PFN3,SLC34A1,SLC34A1	14345,-1857,-1857
chr16:48278578-48278880	chr16	+	48278632	48278862	True	NM_032583,NM_145186,NM_031490	chr16,chr16,chr16	-,-,+	ABCC11,ABCC11,LONP2	-9544,-9544,-472
chr18:12067424-12067640	chr18	+	12067435	12067505	True	NM_023075,NM_014214	chr18,chr18	-,+	MPPE1,IMPA2	-158794,-86059
chr5:142146096-142146406	chr5	+	142146098	142146262	True	NM_015071,NM_001135608,NR_026696	chr5,chr5,chr5	+,+,-	ARHGAP26,ARHGAP26,FGF1	4029,4029,-68463
chr12:51346527-51348363	chr12	+	51346917	51348048	True	NM_001109619,NM_001174130	chr12,chr12	+,-	HIGD1C,SLC11A2	-78,55062
chr17:72919642-72919845	chr17	+	72919697	72919845	True	NM_178160,NM_173477	chr17,chr17	+,-	OTOP2,USH1G	524,-346
chr7:140705244-140706079	chr7	+	140705471	140706113	True	NM_016071,NM_053035,NM_001195278	chr7,chr7,chr7	-,-,+	MRPS33,MRPS33,LOC100131199	8416,8718,67918
chr12:52915062-52915901	chr12	+	52915117	52915937	True	NM_002284,NM_000424	chr12,chr12	+,-	KRT86,KRT5	-219519,-874
chr3:138153402-138153665	chr3	+	138153446	138153654	True	NM_031913,NM_178130	chr3,chr3	+,-	ESYT3,TXNDC6	-82,-104718
chr9:123542844-123544020	chr9	+	123542879	123543741	True	NR_027442,NM_012164	chr9,chr9	+,-	LOC100288842,FBXW2	12033,12049
chr3:57235342-57236037	chr3	+	57235343	57235817	True	NM_012096,NM_003865	chr3,chr3	+,-	APPL1,HESX1	25947,-1063
chr1:109757055-109757477	chr1	+	109757155	109757525	True	NM_006513,NM_001005290,NR_034072	chr1,chr1,chr1	+,-,+	SARS,PSRC1,SARS	-692,68315,-692
chr17:62010009-62011063	chr17	+	62010014	62010974	True	NM_001164257,NM_001039933,NM_000626,NM_021602	chr17,chr17,chr17,chr17	+,-,-,-	C17orf72,CD79B,CD79B,CD79B	64736,-310,-310,-310
chr14:31855746-31856924	chr14	+	31855745	31856517	True	NM_025152,NM_015473	chr14,chr14	+,-	NUBPL,HEATR5A	174073,33321
chr15:83653077-83653459	chr15	+	83653094	83653186	True	NM_031452,NM_001160116	chr15,chr15	+,-	FAM103A1,C15orf40	1808,27265
chr1:54517583-54518406	chr1	+	54517611	54518318	True	NM_153035,NM_004872	chr1,chr1	+,-	TCEANC2,TMEM59	955,843
chr2:261546-263471	chr2	+	261709	263372	True	NM_007099,NM_001040649,NM_004300,NR_024080,NM_001159597,NM_015677	chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,-,-	ACP1,ACP1,ACP1,ACP1,SH3YL1,SH3YL1	1496,1496,1496,1496,746,746
chr8:145730414-145730650	chr8	+	145730414	145730684	True	NM_032902,NM_005309,NM_004260,NM_138431	chr8,chr8,chr8,chr8	+,+,-,+	PPP1R16A,GPT,RECQL4,MFSD3	-8356,-1000,12576,3867
chr8:12664140-12664591	chr8	+	12664156	12664396	True	NR_015383,NR_037495	chr8,chr8	-,+	LOC340357,MIR3926-2	4564,-79462
chr1:200991735-200992160	chr1	+	200991924	200992208	True	NM_001142569,NM_017596	chr1,chr1	+,-	C1orf106,KIF21B	-127976,670
chr19:58737313-58738332	chr19	+	58737991	58738130	True	NM_014480,NM_024620	chr19,chr19	+,-	ZNF544,ZNF329	1939,-75843
chr17:74136611-74137211	chr17	+	74136621	74137162	True	NM_180990,NM_001454	chr17,chr17	+,-	ZACN,FOXJ1	-61409,268
chrX:152485252-152485509	chrX	+	152485402	152485486	True	NM_001080485,NM_004988	chrX,chrX	+,-	ZNF275,MAGEA1	114126,680
chr8:59416133-59417804	chr8	+	59416384	59417794	True	NM_000780,NM_001007067	chr8,chr8	-,+	CYP7A1,SDCBP	-3664,47933
chr12:128905105-128905872	chr12	+	128905145	128905915	True	NM_145648,NR_037406	chr12,chr12	-,+	SLC15A4,MIR3612	402676,-126566
chr1:230847380-230848673	chr1	+	230847491	230848701	True	NM_000029,NM_006615	chr1,chr1	-,+	AGT,CAPN9	1685,34428
chr16:28995296-28995556	chr16	+	28995329	28995571	True	NM_001014987,NM_024816,NM_001014989,NM_001014988,NM_001142448,NM_001142449,NM_001142451,NM_001142450,NM_032038,NM_014387	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,-,+,+,+,+,+,+,+,+	LAT,RABEP2,LAT,LAT,SPNS1,SPNS1,SPNS1,SPNS1,SPNS1,LAT	815,-58797,575,815,-9284,-9284,-9284,-9284,-9284,815
chr4:71575143-71575766	chr4	+	71575224	71575767	True	NM_144646,NM_001130709	chr4,chr4	-,+	IGJ,RUFY3	-42876,-4629
chr22:50173608-50173873	chr22	+	50173633	50173843	True	NM_014838,NR_026993	chr22,chr22	+,-	ZBED4,LOC90834	73653,165
chr9:133568637-133569262	chr9	+	133568784	133569256	True	NM_014285,NR_027440	chr9,chr9	+,-	EXOSC2,LOC100272217	93,-113903
chr20:57416693-57417043	chr20	+	57416965	57417081	True	NM_016592,NR_002785	chr20,chr20	+,-	GNAS,GNAS-AS1	-2221,8927
chr10:96302851-96303968	chr10	+	96302944	96303707	True	NM_022451,NM_018063	chr10,chr10	-,+	NOC3L,HELLS	-180261,1866
chr8:110340999-110342382	chr8	+	110341438	110342230	True	NM_001193557,NR_036472,NM_020189,NR_036471,NM_001128211,NM_032869	chr8,chr8,chr8,chr8,chr8,chr8	+,+,+,+,-,-	ENY2,ENY2,ENY2,ENY2,NUDCD1,NUDCD1	4321,4321,4321,4321,-6,4182
chr3:125486281-125486722	chr3	+	125486435	125486675	True	NR_024250,NR_031687	chr3,chr3	+,-	LOC100125556,MIR548I1	148768,22770
chr5:111720719-111720962	chr5	+	111720755	111721013	True	NR_027706,NM_022140	chr5,chr5	+,-	FLJ11235,EPB41L4A	34266,34049
chr6:42951273-42952301	chr6	+	42951518	42952184	True	NM_006245,NM_000287,NM_180976,NM_180977	chr6,chr6,chr6,chr6	+,-,+,+	PPP2R5D,PEX6,PPP2R5D,PPP2R5D	145,-4537,145,145
chrX:134474535-134474801	chrX	+	134474627	134474841	True	NM_007131,NM_152695	chrX,chrX	-,+	ZNF75D,ZNF449	-44662,3854
chr20:527089-528782	chr20	+	527542	528359	True	NM_031229,NM_177560,NM_001895,NM_177559	chr20,chr20,chr20,chr20	+,-,-,-	RBCK1,CSNK2A1,CSNK2A1,CSNK2A1	-138884,-3060,-3060,-3060
chr12:102483537-102484890	chr12	+	102483654	102484862	True	NM_017915,NM_016053,NM_024057	chr12,chr12,chr12	+,-,-	C12orf48,CCDC53,NUP37	29093,-27755,27549
chr17:74865219-74865544	chr17	+	74865218	74865582	True	NM_144677,NM_198955,NM_001199172,NR_036608	chr17,chr17,chr17,chr17	+,+,+,-	MGAT5B,MGAT5B,MGAT5B,SRSF2	-471,3146,-471,-131725
chr2:74120213-74121221	chr2	+	74120480	74121218	True	NM_001199893,NM_001615,NM_003584	chr2,chr2,chr2	+,+,-	ACTG2,ACTG2,DUSP11	-438,-438,-113196
chrX:70340956-70341449	chrX	+	70340962	70341472	True	NM_000206,NM_005120	chrX,chrX	-,+	IL2RG,MED12	-9481,-2607
chr1:230994262-230995453	chr1	+	230994267	230995421	True	NM_016452,NM_032800,NM_001136495,NM_001136494	chr1,chr1,chr1,chr1	+,-,-,-	CAPN9,C1orf198,C1orf198,C1orf198	-111160,8931,-2485,9964
chr1:231379281-231379813	chr1	+	231379361	231379594	True	NM_152379,NM_014236	chr1,chr1	-,+	C1orf131,GNPAT	-2437,-2493
chr4:57537085-57537984	chr4	+	57537356	57537978	True	NM_032495,NM_001145460,NM_139212,NM_206919	chr4,chr4,chr4,chr4	-,-,-,+	HOPX,HOPX,HOPX,ARL9	9944,9944,9944,-166040
chr10:30980896-30982155	chr10	+	30980927	30982023	True	NM_183058,NM_005204	chr10,chr10	-,+	LYZL2,MAP3K8	-62280,-258112
chr16:27437170-27437890	chr16	+	27437209	27437763	True	NR_037158,NM_021798	chr16,chr16	-,+	LOC283888,IL21R	27001,815
chr7:44507716-44508057	chr7	+	44507878	44508089	True	NM_015332,NM_001003941	chr7,chr7	-,+	NUDCD3,OGDH	22346,138031
chr1:29504059-29504705	chr1	+	29504154	29504750	True	NM_005626,NM_001195001	chr1,chr1	-,+	SRSF4,PTPRU	3942,58277
chr16:27214748-27215013	chr16	+	27214804	27215052	True	NM_024773,NM_145080,NM_001145348	chr16,chr16,chr16	+,-,+	JMJD5,NSMCE1,JMJD5	-48,65111,243
chr19:55547363-55548301	chr19	+	55547574	55547812	True	NM_001083899,NM_133180,NM_016363	chr19,chr19,chr19	-,+,-	GP6,EPS8L1,GP6	1870,39408,1870
chr3:150802058-150802649	chr3	+	150802262	150802683	True	NM_053002,NM_174878	chr3,chr3	+,-	MED12L,CLRN1	1992,-111476
chr1:202853699-202853932	chr1	+	202853802	202853862	True	NM_002871,NR_002929	chr1,chr1	-,+	RABIF,LOC148709	4451,-22971
chr17:79211368-79211678	chr17	+	79211432	79211616	True	NM_144679,NM_001086521	chr17,chr17	-,+	C17orf56,C17orf89	1325,1494
chr20:33879063-33879805	chr20	+	33879260	33879660	True	NM_006690,NM_002212,NM_181466,NM_178468,NM_181468	chr20,chr20,chr20,chr20,chr20	+,-,-,-,-	MMP24,EIF6,EIF6,FAM83C,EIF6	-64772,-6666,-6666,615,-6754
chr7:2560764-2561004	chr7	+	2560982	2561046	True	NM_002304,NM_001040167,NM_001040168,NM_001166355,NM_152743	chr7,chr7,chr7,chr7,chr7	+,+,+,+,-	LFNG,LFNG,LFNG,LFNG,BRAT1	-3536,-1554,-1554,-8870,34396
chr1:39457694-39458086	chr1	+	39457761	39458099	True	NM_024595,NM_001136275,NM_017821	chr1,chr1,chr1	+,+,-	AKIRIN1,AKIRIN1,RHBDL2	-896,-896,-50305
chr1:10509204-10509503	chr1	+	10509491	10509551	True	NM_004401,NM_001302	chr1,chr1	-,+	DFFA,CORT	23112,224
chr9:44017657-44019477	chr9	+	44018903	44019491	True	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	-388173,-334069
chr9:44017657-44019477	chr9	+	66366340	66366928	False	NR_024443,NR_024496	chr9,chr9	-,+	LOC100133920,LOC442421	664104,127340
chr1:15942753-15943650	chr1	+	15943103	15943651	True	NM_032341,NM_024758	chr1,chr1	+,-	DDI2,AGMAT	301,-31498
chr2:232261902-232262315	chr2	+	232261933	232262231	True	NR_002921,NM_145236	chr2,chr2	-,+	SNORA75,B3GNT7	58466,-1649
chr2:85822611-85823160	chr2	+	85822640	85823118	True	NR_033179,NM_016494,NM_001031738	chr2,chr2,chr2	-,+,-	TMEM150A,RNF181,TMEM150A	6754,-18,6754
chr20:43373432-43373733	chr20	+	43373455	43373781	True	NM_182970,NM_022358	chr20,chr20	-,+	RIMS4,KCNK15	65181,706
chr10:81893095-81893305	chr10	+	81893132	81893324	True	NM_001012973,NR_027432	chr10,chr10	+,-	PLAC9,LOC219347	-925,-54183
chr2:242042894-242043284	chr2	+	242043100	242043258	True	NR_028049,NM_182501,NM_002712,NR_028051,NR_028050	chr2,chr2,chr2,chr2,chr2	-,-,+,-,-	MTERFD2,MTERFD2,PPP1R7,MTERFD2,MTERFD2	-1353,-1353,46643,-1353,-1353
chr9:34991918-34992274	chr9	+	34992167	34992295	True	NM_001135004,NM_001135005,NM_012266,NM_007126	chr9,chr9,chr9,chr9	+,+,+,-	DNAJB5,DNAJB5,DNAJB5,VCP	-2499,-1957,-2499,80494
chr4:88584393-88585073	chr4	+	88584440	88585088	True	NM_004407,NM_004684	chr4,chr4	+,-	DMP1,SPARCL1	-13037,-133785
chr19:17933176-17933784	chr19	+	17933290	17933378	True	NM_014256,NM_005543	chr19,chr19	+,-	B3GNT3,INSL3	-27422,-970
chrX:70586553-70586765	chrX	+	70586573	70586789	True	NM_001171162,NM_138923,NM_004606	chrX,chrX,chrX	-,+,+	ZMYM3,TAF1,TAF1	-111526,-510,-510
chr22:30819212-30819420	chr22	+	30819253	30819441	True	NM_001017981,NM_001003704,NM_016498	chr22,chr22,chr22	-,+,+	RNF215,MTFP1,MTFP1	-35951,2169,2169
chr8:16853521-16855309	chr8	+	16853800	16855321	True	NM_181723,NM_019851	chr8,chr8	+,-	EFHA2,FGF20	29425,4409
chr1:248139362-248139587	chr1	+	248139467	248139625	True	NM_001004491,NM_001001959	chr1,chr1	+,-	OR2AK2,OR11L1	-10893,-134269
chr5:156694083-156694705	chr5	+	156694206	156694717	True	NM_001037333,NM_001037332,NM_001001343,NM_014376	chr5,chr5,chr5,chr5	+,+,-,+	CYFIP2,CYFIP2,FNDC9,CYFIP2	-1166,-1070,78063,1644
chr2:132559062-132559269	chr2	+	132559139	132559273	True	NM_013310,NM_214461	chr2,chr2	+,-	C2orf27A,C2orf27B	-79126,11
chr11:33893529-33894941	chr11	+	33893925	33894986	True	NM_001142316,NM_203364,NM_001142315	chr11,chr11,chr11	-,+,-	LMO2,CAPRIN1,LMO2	-2554,178243,-2416
chr22:39266888-39267378	chr22	+	39266936	39267416	True	NM_014292,NM_145699	chr22,chr22	-,+	CBX6,APOBEC3A	892,86110
chr1:14676352-14677260	chr1	+	14676739	14677223	True	NM_015209,NR_027136	chr1,chr1	+,-	KAZN,C1orf126	247989,801787
chr22:24105394-24105935	chr22	+	24105467	24105833	True	NM_213720,NM_013378,NM_182520,NM_005940	chr22,chr22,chr22,chr22	-,-,+,+	CHCHD10,VPREB3,C22orf15,MMP11	4358,-8837,-310,9202
chr13:30410654-30411725	chr13	+	30410739	30411681	True	NM_007106,NR_033889	chr13,chr13	-,+	UBL3,LOC440131	13197,98986
chr8:73920557-73920883	chr8	+	73920613	73920899	True	NM_003218,NM_153225,NM_017489	chr8,chr8,chr8	+,-,+	TERF1,C8orf84,TERF1	197,84658,197
chr20:62687613-62688038	chr20	+	62687824	62688004	True	NM_198723,NM_018419,NM_003195	chr20,chr20,chr20	+,-,+	TCEA2,SOX18,TCEA2	434,-6845,6005
chr17:43663397-43663636	chr17_ctg5_hap1	-	1424263	1424342	False	NR_002940,NM_016632	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LRRC37A4,ARL17A	57034,89593
chr17:43663397-43663636	chr17	+	43663419	43663661	True	NR_026901,NR_037772	chr17,chr17	-,+	LOC644172,CRHR1	16137,34048
chr17:43663397-43663636	chr17	-	44337723	44337801	False	NM_001193465,NM_014834	chr17,chr17	-,+	KIAA1267,LRRC37A	-34983,34695
chr2:79348718-79350403	chr2	+	79349027	79350442	True	NR_002714,NM_002909	chr2,chr2	-,+	REG1P,REG1A	15162,-1494
chr5:53703668-53704343	chr5	+	53703905	53704359	True	NM_006308,NM_019087	chr5,chr5	+,-	HSPB3,ARL15	47071,-97502
chr15:51970835-51972544	chr15	+	51971239	51972582	True	NM_013243,NM_015263,NM_001165257	chr15,chr15,chr15	+,-,+	SCG3,DMXL2,SCG3	967,-56272,967
chr8:144978097-144978322	chr8	+	144978096	144978322	True	NM_000837,NM_031308	chr8,chr8	+,-	GRINA,EPPK1	85903,-30662
chr19:1172113-1172351	chr19	+	1172118	1172374	True	NM_000455,NM_014963	chr19,chr19	+,-	STK11,SBNO2	33423,1958
chr20:3390228-3391835	chr20	+	3390238	3391484	True	NM_001009984,NM_139322	chr20,chr20	-,+	C20orf194,ATRN	-1983,60180
chr9:123478056-123479186	chr9	+	123478076	123478975	True	NR_027442,NM_001080497	chr9,chr9	+,-	LOC100288842,MEGF9	76799,-1311
chr2:32490408-32490787	chr2	+	32490560	32490776	True	NM_032312,NM_021209,NM_001199138,NM_001199139	chr2,chr2,chr2,chr2	+,-,-,-	YIPF4,NLRC4,NLRC4,NLRC4	12181,86,-611,25
chr12:7813724-7814715	chr12	+	7813901	7814513	True	NM_001644,NM_199286	chr12,chr12	-,+	APOBEC1,DPPA3	4039,49575
chr2:155554740-155554951	chr2	+	155554827	155554905	True	NM_019845,NM_002239	chr2,chr2	-,+	RPRM,KCNJ3	-1219505,187
chr12:81102514-81103738	chr12	+	81102624	81103699	True	NM_002469,NM_005593,NR_030348	chr12,chr12,chr12	+,+,-	MYF6,MYF5,MIR617	-1267,7008,122759
chr8:143852501-143853075	chr8	+	143852603	143853117	True	NM_177477,NM_177476,NM_177457,NM_177458,NM_016647,NM_023946	chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,+,-	LYNX1,LYNX1,LYNX1,LYNX1,C8orf55,LYNX1	5677,5370,6573,-1357,-44033,6572
chr5:141705020-141705333	chr5	+	141705162	141705344	True	NM_030571,NM_001127496,NM_030964	chr5,chr5,chr5	+,-,-	NDFIP1,SPRY4,SPRY4	-216896,-542,-542
chr17:9727041-9728355	chr17	+	9727081	9728131	True	NM_001105571,NM_004246	chr17,chr17	-,+	DHRS7C,GLP2R	-32480,1249
chr13:44430657-44431758	chr13	+	44430908	44431476	True	NM_001128303,NM_144974	chr13,chr13	+,-	C13orf31,CCDC122	21943,22409
chr8:99440466-99440745	chr8	+	99440470	99440698	True	NM_024759,NM_020697	chr8,chr8	-,+	NIPAL2,KCNS2	-133849,-1271
chr2:114356219-114357730	chr2	+	114357313	114357581	True	NR_024077,NR_024004,NR_024005	chr2,chr2,chr2	+,-,-	WASH2P,DDX11L2,DDX11L2	-16134,3763,1622
chr19:51018216-51018749	chr19	+	51018215	51018797	True	NM_138334,NM_001024656,NM_001114598,NM_206538	chr19,chr19,chr19,chr19	-,-,-,+	JOSD2,ASPDH,ASPDH,C19orf63	-3870,-268,-1073,-38530
chr14:76449157-76450138	chr14	+	76449291	76449807	True	NM_001102564,NM_052873,NM_003239	chr14,chr14,chr14	+,+,-	C14orf179,C14orf179,TGFB3	2288,2288,-1199
chr12:1062585-1063722	chr12	+	1062625	1063210	True	NM_134424,NM_178039	chr12,chr12	-,+	RAD52,ERC1	-3762,37193
chr12:7564321-7565412	chr12	+	7564366	7565415	True	NM_174941,NM_001080454	chr12,chr12	-,+	CD163L1,ACSM4	31385,-107504
chr15:42120593-42121785	chr15	+	42120630	42121415	True	NR_036195,NM_001198588,NM_001114632,NM_001114633,NM_005090	chr15,chr15,chr15,chr15,chr15	-,+,+,+,+	MIR4310,JMJD7-PLA2G4B,JMJD7,PLA2G4B,JMJD7-PLA2G4B	37384,-398,-398,9595,-398
chr5:1594000-1594213	chr5	+	1594044	1594114	True	NR_003263,NM_004553	chr5,chr5	-,+	SDHAP3,NDUFS6	582,207381
chr2:234602638-234604063	chr2	+	234602713	234603751	True	NM_001072,NM_001001394,NM_205862	chr2,chr2,chr2	+,-,+	UGT1A6,DNAJB3,UGT1A6	-1253,48965,-2444
chr21:45626942-45627161	chr21	+	45627096	45627158	True	NM_198155,NM_015259	chr21,chr21	+,-	C21orf33,ICOSLG	-73653,33726
chr11:18033362-18033976	chr11	+	18033545	18034015	True	NM_012139,NM_054031	chr11,chr11	-,+	SERGEF,MRGPRX3	672,108486
chr12:10957562-10958917	chr12	+	10957646	10958967	True	NM_023918,NM_023919,NM_023917,NM_005042	chr12,chr12,chr12,chr12	-,-,-,+	TAS2R8,TAS2R7,TAS2R9,PRH2	672,-2420,3860,122866
chr12:49364614-49365365	chr12	+	49364633	49365313	True	NM_003394,NM_005430	chr12,chr12	-,+	WNT10B,WNT1	378,6922
chr10:22635266-22637195	chr10	+	22635487	22636689	True	NM_172242,NM_012443,NR_036533	chr10,chr10,chr10	+,+,-	SPAG6,SPAG6,LOC100499489	-1153,-1153,90229
chr1:76261600-76262709	chr1	+	76261767	76262527	True	NM_004582,NR_003042,NM_080868,NR_002749,NR_002748,NM_002440	chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,+,+,+	RABGGTB,SNORD45C,ASB17,SNORD45A,SNORD45B,MSH4	-9932,-9061,135639,-8244,-6656,102
chr11:66046177-66046568	chr11	+	66046332	66046502	True	NM_020470,NM_182553	chr11,chr11	-,+	YIF1A,CNIH2	10186,-687
chr15:43980173-43980634	chr15	+	43980338	43980661	True	NM_001015001,NM_172097	chr15,chr15	+,-	CKMT1A,CATSPER2	4422,-39299
chr15:43980173-43980634	chr15	+	43880506	43880829	False	NM_001190214,NM_014659,NM_001130858,NM_001130859,NM_020990	chr15,chr15,chr15,chr15,chr15	-,-,-,-,+	PPIP5K1,PPIP5K1,PPIP5K1,PPIP5K1,CKMT1B	1673,-3416,1673,1673,4422
chr7:6681003-6681471	chr7	+	6681014	6681388	True	NM_017560,NM_006956	chr7,chr7	+,-	ZNF853,ZNF12	-25539,65228
chr10:120925931-120926618	chr10	+	120925960	120926656	True	NM_005308,NM_213649	chr10,chr10	+,-	GRK5,SFXN4	40540,-756
chr11:125775126-125776575	chr11	+	125775143	125776059	True	NM_031307,NM_013264	chr11,chr11	-,+	PUS3,DDX25	-2027,-922
chr8:143960047-143960559	chr8	+	143960145	143960493	True	NM_001026213,NM_002066,NM_000497	chr8,chr8,chr8	-,+,-	CYP11B1,GML,CYP11B1	793,-43979,793
chr5:60930728-60931724	chr5	+	60930829	60931753	True	NM_001048249,NM_173667	chr5,chr5	-,+	C5orf43,FLJ37543	-472527,1882
chr22:27140277-27141425	chr22	+	27140281	27141453	True	NR_033321,NM_001887	chr22,chr22	+,-	MIAT,CRYBB1	-86889,-126290
chr3:25818495-25820145	chr3	+	25819009	25820165	True	NM_018297,NM_001145391,NM_001145295,NM_001145293	chr3,chr3,chr3,chr3	-,+,-,-	NGLY1,OXSM,NGLY1,NGLY1	4881,11397,4881,4881
chr8:87354132-87354339	chr8	+	87354271	87354355	True	NM_007013,NM_138817	chr8,chr8	+,-	WWP1,SLC7A13	638,-111667
chr19:9218847-9219891	chr19	+	9219314	9219786	True	NM_001005192,NM_001005193,NM_001004456	chr19,chr19,chr19	-,-,+	OR7G1,OR7G2,OR1M1	6717,-5332,-15444
chr13:39260911-39261196	chr13	+	39260910	39261118	True	NM_207361,NM_001144033	chr13,chr13	+,-	FREM2,STOML3	54,303928
chr3:57995033-57995401	chr3	+	57995219	57995365	True	NM_001164317,NM_001457,NM_004944,NM_001164318,NM_001164319	chr3,chr3,chr3,chr3,chr3	+,+,-,+,+	FLNB,FLNB,DNASE1L3,FLNB,FLNB	-1143,-1143,205083,-1143,-1143
chr6:128841967-128842403	chr6	+	128842001	128842405	True	NM_002844,NM_001135648,NM_000426	chr6,chr6,chr6	-,-,+	PTPRK,PTPRK,LAMA2	-182,-131,361880
chr19:59055216-59055727	chr19	+	59055217	59055729	True	NM_198426,NM_005762	chr19,chr19	-,+	CHMP2A,TRIM28	10676,106
chr18:23800672-23802417	chr18	+	23800744	23802199	True	NM_005640,NM_005637	chr18,chr18	+,-	TAF4B,SS18	4209,-130133
chr8:135709892-135710248	chr8	+	135710115	135710281	True	NM_001167583,NM_001029939,NR_002438,NM_001174158	chr8,chr8,chr8,chr8	-,-,+,-	ZFAT,ZFAT,ZFAT-AS1,ZFAT	-1314,-1314,-99852,-1314
chr13:25161757-25162899	chr13	+	25161837	25162793	True	NM_006437,NR_002815	chr13,chr13	-,+	PARP4,LOC374491	-74889,-7542
chr13:25161757-25162899	chr13	-	20006189	20006239	False	NR_034026,NR_027248	chr13,chr13	+,-	LOC100287114,ANKRD26P3	-87051,-87076
chr13:25161757-25162899	chr13	-	25534553	25535512	False	NR_026730,NM_030979	chr13,chr13	-,+	TPTE2P1,PABPC3	7145,134763
chr2:65660852-65662751	chr2	+	65661094	65662643	True	NM_181784,NM_005722	chr2,chr2	-,+	SPRED2,ACTR2	-1438,-206323
chr1:75080283-75081433	chr1	+	75080628	75081331	True	NM_001162916,NM_001002912	chr1,chr1	+,-	TYW3,C1orf173	117504,58149
chr17:26732555-26733059	chr17	+	26732570	26733008	True	NM_080669,NM_015077	chr17,chr17	-,+	SLC46A1,SARM1	270,-33634
chr6:7536636-7537056	chr6	+	7536635	7536721	True	NM_004415,NM_001008844,NM_001170693	chr6,chr6,chr6	+,+,-	DSP,DSP,CAGE1	5148,5148,-146693
chr7:148398340-148400169	chr7	+	148398348	148400170	True	NM_003592,NM_001203249	chr7,chr7	+,-	CUL1,EZH2	-2475,180481
chr12:76690549-76691767	chr12	+	76690608	76691578	True	NM_015336,NM_024685	chr12,chr12	+,-	ZDHHC17,BBS10	466275,50694
chr10:75260561-75262364	chr10	+	75260561	75261939	True	NM_001142353,NM_021132,NM_004922,NM_001142354	chr10,chr10,chr10,chr10	-,-,+,-	PPP3CB,PPP3CB,SEC24C,PPP3CB	-4779,-4779,242191,-4779
chr1:179051740-179052032	chr1	+	179051764	179052070	True	NM_022371,NM_001136000	chr1,chr1	+,-	TOR3A,ABL2	-703,60204
chr6:131380345-131381294	chr6	+	131380545	131381005	True	NM_001431,NM_016377,NM_001199388,NM_001135554,NM_001135555	chr6,chr6,chr6,chr6,chr6	-,+,-,-,-	EPB41L2,AKAP7,EPB41L2,EPB41L2,EPB41L2	3513,85455,3467,3513,3467
chr7:134917317-134917723	chr7	+	134917434	134917590	True	NM_014149,NM_182489	chr7,chr7	-,+	WDR91,STRA8	-21118,-766
chr12:53994747-53995385	chr12	+	53994751	53995310	True	NM_001130059,NM_134324	chr12,chr12	-,+	ATF7,TARBP2	54,-99425
chr12:50355781-50356054	chr12	+	50355806	50356086	True	NM_001651,NR_026948	chr12,chr12	+,-	AQP5,LOC283332	-578,-50160
chr19:16179279-16180949	chr19	+	16179477	16180919	True	NM_001145160,NM_003290,NM_054113	chr19,chr19,chr19	+,+,-	TPM4,TPM4,CIB3	-1214,6215,103417
chr2:233867866-233868950	chr2	+	233867870	233868586	True	NM_005383,NM_019850	chr2,chr2	+,-	NEU2,NGEF	28795,9415
chr2:220034052-220034737	chr2	+	220034058	220034766	True	NM_015680,NM_024782,NM_001144890,NM_144712,NM_001144889,NM_024293	chr2,chr2,chr2,chr2,chr2,chr2	-,-,-,-,-,+	CNPPD1,NHEJ1,SLC23A3,SLC23A3,SLC23A3,FAM134A	6986,-8471,101,101,101,8172
chr22:18778885-18779374	chr22	+	18778934	18779378	True	NM_005675,NR_003267	chr22,chr22	+,-	DGCR6,GGT3P	114357,146
chr22:18778885-18779374	chr22	-	25006799	25006849	False	NM_005265,NM_207644,NM_001032365,NM_001032364	chr22,chr22,chr22,chr22	+,-,+,+	GGT1,C22orf36,GGT1,GGT1	-7670,-17764,-3224,-7726
chr22:18778885-18779374	chr22	+	21580042	21580486	False	NR_024583,NR_002829	chr22,chr22	+,-	POM121L8P,P2RX6P	56227,-181504
chr17:76164115-76164418	chr17	+	76164114	76164362	True	NM_003258,NM_004710	chr17,chr17	-,+	TK1,SYNGR2	18973,308
chr3:107629930-107631480	chr3	+	107629997	107631482	True	NR_015394,NR_024276	chr3,chr3	+,-	LOC285205,LOC151658	-27996,-33082
chr1:104696199-104696531	chr1	+	104696204	104696570	True	NM_001008221,NR_033990	chr1,chr1	-,+	AMY1A,LOC100129138	-457131,-80610
chr6:3122436-3123274	chr6	+	3122540	3123266	True	NR_026648,NR_026649,NR_026650,NM_001069,NM_004332	chr6,chr6,chr6,chr6,chr6	+,+,+,-,+	BPHL,BPHL,BPHL,TUBB2A,BPHL	-3666,-3666,-3666,34567,-3666
chr21:43638735-43638962	chr21	+	43638748	43638960	True	NM_004915,NM_207174,NM_003226,NM_016818,NM_207629	chr21,chr21,chr21,chr21,chr21	+,+,-,+,+	ABCG1,ABCG1,TFF3,ABCG1,ABCG1	306,1047,96796,306,-2612
chr6:66394807-66396138	chr6	+	66394881	66396123	True	NM_001142800,NR_026540	chr6,chr6	-,+	EYS,MCART3P	21053,101648
chr2:71065796-71066348	chr2	+	71065815	71066297	True	NM_015717,NM_012476	chr2,chr2	-,+	CD207,VAX2	-2862,61422
chr16:67060672-67061018	chr16	+	67060733	67061061	True	NR_024525,NM_001755,NM_022845	chr16,chr16,chr16	-,+,+	FAM96B,CBFB,CBFB	-92413,1988,1988
chr19:45169792-45170472	chr19	+	45169963	45170421	True	NM_001127893,NM_020219,NR_027754	chr19,chr19,chr19	+,+,-	CEACAM19,CEACAM19,CEACAM22P	4302,4302,-109813
chr3:45016119-45016756	chr3	+	45016193	45016797	True	NM_001135179,NM_016598,NR_023353,NM_015004	chr3,chr3,chr3,chr3	-,-,+,+	ZDHHC3,ZDHHC3,EXOSC7,EXOSC7	927,927,943,943
chrX:152737606-152737956	chrX	+	152737605	152737975	True	NM_017518,NM_001711	chrX,chrX	-,+	HAUS7,BGN	-1002,22371
chr15:72693256-72694397	chr15	+	72693921	72694295	True	NM_001080462,NM_000520	chr15,chr15	+,-	TMEM202,HEXA	-3314,-25401
chr3:182819665-182821481	chr3	+	182820173	182821291	True	NM_020166,NM_032047	chr3,chr3	-,+	MCCC1,B3GNT5	-2808,149740
chr15:90544139-90544691	chr15	+	90544258	90544603	True	NM_182616,NM_198526	chr15,chr15	-,+	C15orf38,ZNF710	-88036,148
chr1:19217470-19218242	chr1	+	19217504	19218234	True	NM_001161504,NM_001135254	chr1,chr1	-,+	ALDH4A1,PAX7	-119,-260055
chr17:73085771-73086646	chr17	+	73085938	73086449	True	NM_014595,NM_004695	chr17,chr17	-,+	NT5C,SLC16A5	41478,-1934
chr9:32632991-32633681	chr9	+	32633071	32633418	True	NM_153809,NR_033992	chr9,chr9	-,+	TAF1L,LOC100129250	2306,-81357
chr1:117661947-117662785	chr1	+	117662298	117662822	True	NM_001145635,NR_030640,NM_025188	chr1,chr1,chr1	-,+,-	TRIM45,MIR942,TRIM45	1639,-25087,1639
chr7:79081627-79082181	chr7	+	79081654	79082054	True	NR_031667,NM_012301	chr7,chr7	+,-	MIR548M,MAGI2	318517,886
chr17:33776869-33777701	chr17	+	33776946	33777757	True	NM_144682,NR_003037	chr17,chr17	-,+	SLFN13,SNORD7	-1090,122918
chr18:43755101-43757010	chr18	+	43755116	43756318	True	NM_001008239,NM_145055,NM_001001937	chr18,chr18,chr18	+,+,-	C18orf25,C18orf25,ATP5A1	-1179,-1179,-70917
chr1:6300508-6301480	chr1	+	6300567	6301527	True	NM_012405,NM_001024598	chr1,chr1	-,+	ICMT,HES3	-4523,2724
chr3:125092270-125093118	chr3	+	125092278	125093160	True	NM_021964,NR_024250	chr3,chr3	-,+	ZNF148,LOC100125556	1088,542283
chr11:94215517-94215815	chr11	+	94215516	94215742	True	NM_017704,NM_005590	chr11,chr11	+,-	ANKRD49,MRE11A	11410,11354
chr15:30325299-30325998	chr15	+	30325363	30325679	True	NR_026859,NM_175610	chr15,chr15	+,-	FAM7A3,TJP1	70255,-210657
chr17:61598423-61599754	chr17	+	61598682	61599622	True	NM_001915,NM_173092,NM_030779	chr17,chr17,chr17	-,+,+	CYB561,KCNH6,KCNH6	-74960,1072,1072
chr10:104000627-104000857	chr10	+	104000769	104000887	True	NM_001199378,NM_001199379,NM_005029,NM_004193	chr10,chr10,chr10,chr10	+,+,-,+	GBF1,GBF1,PITX3,GBF1	4367,4367,394,4367
chr16:74701503-74702348	chr16	+	74701538	74702344	True	NM_018124,NM_032268	chr16,chr16	-,+	RFWD3,ZNRF1	-759,330570
chr6:18142736-18143946	chr6	+	18142859	18143754	True	NM_000367,NM_153042	chr6,chr6	-,+	TPMT,KDM1B	11671,11864
chr19:58330875-58331085	chr19	+	58330878	58331086	True	NR_024162,NM_001204818,NM_024762	chr19,chr19,chr19	-,+,-	FKBP1AP1,LOC100293516,ZNF552	7794,10575,-4597
chr4:115516085-115516973	chr4	+	115516085	115516800	True	NM_022569,NM_001128174	chr4,chr4	-,+	NDST4,UGT8	518282,2810
chr6:49494048-49494257	chr6	+	49494148	49494270	True	NM_000255,NM_001145652	chr6,chr6	-,+	MUT,C6orf141	-63107,23842
chr11:118023873-118024188	chr11	+	118023881	118024235	True	NR_024527,NM_001142349,NM_001142348,NM_019894,NM_174934	chr11,chr11,chr11,chr11,chr11	-,-,-,+,-	SCN4B,SCN4B,SCN4B,TMPRSS4,SCN4B	-7697,-7697,-251,-76205,-251
chr3:57745095-57745960	chr3	+	57745342	57746014	True	NM_007159,NM_152678	chr3,chr3	+,-	SLMAP,FAM116A	-2228,-66526
chr2:110765237-110765518	chr2	+	110765239	110765508	True	NR_037627,NR_036225	chr2,chr2	+,-	LOC100288570,MIR4267	-60023,62162
chr2:110765237-110765518	chr2	-	111121036	111121305	False	NR_037626,NR_027244	chr2,chr2	+,-	LOC100507334,LOC151009	-117873,20858
chr19:54620330-54621788	chr19	+	54620541	54621703	True	NM_013342,NM_015629	chr19,chr19	-,+	TFPT,PRPF31	-1486,-1802
chr7:75369075-75369603	chr7	+	75369091	75369283	True	NM_001040456,NM_005338	chr7,chr7	+,-	RHBDD2,HIP1	139033,-812
chr19:53698241-53699860	chr19	+	53698336	53699887	True	NM_024733,NM_173856	chr19,chr19	-,+	ZNF665,VN1R2	-1717,61657
chr11:64125167-64125606	chr11	+	64125286	64125654	True	NM_003942,NM_001006944,NM_016404	chr11,chr11,chr11	+,+,-	RPS6KA4,RPS6KA4,TRMT112	970,970,-40253
chr6:36562401-36562630	chr6	+	36562400	36562659	True	NM_003017,NR_037491,NR_036610	chr6,chr6,chr6	+,-,+	SRSF3,MIR3925,SRSF3	-361,27683,-361
chr4:3551325-3551638	chr4	+	3551326	3551636	True	NM_002337,NM_173660	chr4,chr4	-,+	LRPAP1,DOK7	-17102,-86344
chr4:3551325-3551638	chr9	-	67678771	67678821	False	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	115418,247939
chr4:3551325-3551638	chr9	+	47170547	47170697	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-3539817,-483032
chr9:77696593-77698296	chr9	+	77696617	77698014	True	NM_012383,NM_017881,NR_023352,NM_001127603	chr9,chr9,chr9,chr9	+,-,-,-	OSTF1,C9orf95,C9orf95,C9orf95	5383,5180,5180,5180
chr13:21098290-21098607	chr13	+	21098374	21098527	True	NM_006531,NM_015974	chr13,chr13	+,-	IFT88,CRYL1	42680,1540
chr4:106393439-106394111	chr4	+	106393463	106394074	True	NR_003586,NM_176869,NM_006903,NM_176867,NM_176866	chr4,chr4,chr4,chr4,chr4	+,-,-,-,-	EEF1A1P9,PPA2,PPA2,PPA2,PPA2	11788,1214,1214,1214,1214
chrX:102755743-102756298	chrX	+	102755822	102756282	True	NM_001006935,NM_080879	chrX,chrX	+,-	TCEAL4,RAB40A	84136,18185
chr12:123215783-123216110	chr12	+	123215804	123216086	True	NM_032554,NM_003677	chr12,chr12	-,+	GPR81,DENR	-675,21284
chr2:198651025-198651266	chr2	+	198651209	198651313	True	NM_033030,NM_006226,NM_197970	chr2,chr2,chr2	-,+,-	BOLL,PLCL1,BOLL	-1135,18112,-271
chr14:103674219-103674531	chr14	+	103674226	103674444	True	NR_033938,NM_006291	chr14,chr14	-,+	LOC100131366,TNFAIP2	-18861,-81613
chr9:130893836-130894350	chr9	+	130893890	130894326	True	NR_027811,NR_027812,NR_024425,NM_025072	chr9,chr9,chr9,chr9	-,-,+,-	PTGES2,PTGES2,LOC389791,PTGES2	-3178,-3178,-3133,-3416
chr17:18279520-18280181	chr17	+	18279644	18280118	True	NM_148918,NM_001145127	chr17,chr17	-,+	SHMT1,EVPLL	-12788,960
chr19:8385031-8385545	chr19	+	8385110	8385528	True	NM_005001,NM_001031	chr19,chr19	-,+	NDUFA7,RPS28	802,855
chr11:118477032-118478314	chr11	+	118477131	118477987	True	NM_015157,NM_001144758,NM_020153,NM_001144759	chr11,chr11,chr11,chr11	+,+,-,+	PHLDB1,PHLDB1,IFT46,PHLDB1	29,318,-40340,318
chr10:105218781-105219588	chr10	+	105218996	105219540	True	NR_024552,NM_001001412,NM_004210,NM_015916	chr10,chr10,chr10,chr10	-,-,+,-	CALHM2,CALHM1,NEURL,CALHM2	-6834,-348,34194,-6834
chr13:20768804-20770147	chr13	+	20768902	20770170	True	NM_004004,NM_001190965	chr13,chr13	-,+	GJB2,ZMYM2	-1788,-235979
chr8:75226291-75226789	chr8	+	75226334	75226763	True	NM_018972,NM_020647	chr8,chr8	+,-	GDAP1,JPH1	35854,6860
chr12:51661900-51662158	chr12	+	51661999	51662195	True	NM_001136269,NM_001031628,NM_001033873	chr12,chr12,chr12	+,-,-	DAZAP2,SMAGP,SMAGP	-29549,2065,1857
chr17:48044511-48045042	chr17	+	48044524	48044712	True	NM_001934,NM_005220,NM_138281	chr17,chr17,chr17	+,-,+	DLX4,DLX3,DLX4	5417,27926,1849
chr8:146170952-146171608	chr8	+	146171008	146171654	True	NM_001029976,NM_006958,NR_002807	chr8,chr8,chr8	-,-,+	ZNF16,ZNF16,TMED10P1	4670,4670,48596
chr4:13633248-13634250	chr4	+	13633442	13634286	True	NM_148894,NR_003132	chr4,chr4	-,+	BOD1L,HSP90AB2P	-4114,-298456
chr7:128503558-128505189	chr7	+	128503607	128505204	True	NM_001198909,NM_001195150,NM_004231,NM_001135914	chr7,chr7,chr7,chr7	+,+,+,-	ATP6V1F,LOC100130705,ATP6V1F,KCP	-801,1259,-801,45619
chr11:119692273-119692743	chr11	+	119692331	119692759	True	NM_203286,NM_178507	chr11,chr11	-,+	PVRL1,OAF	-92896,388987
chr3:179184005-179185876	chr3	+	179184184	179185705	True	NM_004301,NM_021629	chr3,chr3	+,-	ACTL6A,GNB4	95002,-14813
chrX:46806110-46806613	chrX	+	46806114	46806427	True	NM_032591,NM_014735	chrX,chrX	-,+	SLC9A7,PHF16	-187642,-34297
chr15:91257837-91258454	chr15	+	91257837	91258446	True	NM_198527,NM_000057	chr15,chr15	-,+	HDDC3,BLM	217391,2132
chr11:62010861-62011915	chr11	+	62010878	62011900	True	NM_206998,NM_006551	chr11,chr11	-,+	SCGB1D4,SCGB1D2	54686,-1205
chr18:61421689-61422172	chr18	+	61421695	61422115	True	NM_001040147,NM_006919	chr18,chr18	+,-	SERPINB7,SERPINB3	-1470,-92498
chr11:123396484-123396799	chr11	+	123396491	123396811	True	NM_020716,NM_001040151	chr11,chr11	+,-	GRAMD1B,SCN3B	-14,128554
chr10:103540612-103541204	chr10	+	103540648	103541186	True	NM_006993,NM_033164,NM_033165,NM_033163,NR_036114,NM_006119	chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,+,-	NPM3,FGF8,FGF8,FGF8,MIR3158-1,FGF8	2034,-4889,-4889,-4889,-179525,-4889
chr12:88408237-88409826	chr12	+	88408419	88409845	True	NM_152589,NM_001009894	chr12,chr12	-,+	C12orf50,C12orf29	13381,19422
chr15:25627390-25628708	chr15	+	25627881	25628463	True	NM_130838,NR_001295	chr15,chr15	-,+	UBE3A,SNORD109A	22250,-104451
chr11:34534810-34535083	chr11	+	34534877	34535095	True	NM_001422,NM_001752,NM_198381	chr11,chr11,chr11	-,+,-	ELF5,CAT,ELF5	285,-74461,-1531
chr2:43823305-43824179	chr2	+	43823310	43823736	True	NM_022065,NM_001083953,NM_172069	chr2,chr2,chr2	-,-,+	THADA,THADA,PLEKHH2	-125,-197,40702
chr1:160064732-160064942	chr1	+	160064747	160064887	True	NM_052868,NM_004983	chr1,chr1	-,+	IGSF8,KCNJ9	3571,-13438
chr1:110697071-110697326	chr1	+	110697087	110697368	True	NM_006492,NM_001010898	chr1,chr1	-,+	ALX3,SLC6A17	-83765,-4009
chr6:80816075-80816394	chr6	+	80816074	80816408	True	NM_183050,NM_022726,NM_000056	chr6,chr6,chr6	+,-,+	BCKDHB,ELOVL4,BCKDHB	-65,-158759,-65
chr7:114099028-114099761	chr7	+	114099104	114099629	True	NM_002711,NM_148899	chr7,chr7	-,+	PPP1R3A,FOXP2	-540022,-32606
chr13:73304226-73305127	chr13	+	73304247	73304895	True	NM_001071775,NM_024808	chr13,chr13	-,+	MZT1,C13orf34	-2309,-2263
chr16:49430586-49431544	chr16	+	49430800	49431442	True	NM_144602,NM_004352	chr16,chr16	+,-	C16orf78,CBLN1	-23043,-115058
chr1:156255281-156255502	chr1	+	156255323	156255497	True	NR_026678,NM_015327,NM_032323	chr1,chr1,chr1	+,-,+	TMEM79,SMG5,TMEM79	-2670,-2703,-1304
chr22:25369519-25369911	chr22	+	25369686	25369950	True	NM_001145206,NM_001001663	chr22,chr22	+,-	KIAA1671,TMEM211	53990,-34372
chr7:72682939-72683313	chr7	+	72682955	72683313	True	NR_002164,NR_003186	chr7,chr7	-,+	GTF2IRD2P1,NCF1B	2395,-48332
chr7:72682939-72683313	chr7	+	74236887	74237245	False	NM_173537,NM_000265	chr7,chr7	-,+	GTF2IRD2,NCF1	30646,-48629
chr7:72682939-72683313	chr7	-	74539026	74539384	False	NM_001003795,NR_003187	chr7,chr7	+,-	GTF2IRD2B,NCF1C	-30730,48482
chr5:1110712-1111003	chr5	+	1110720	1110926	True	NM_001003841,NM_006598	chr5,chr5	+,-	SLC6A19,SLC12A7	90783,1296
chr1:9085257-9085635	chr1	+	9085301	9085679	True	NM_001215,NM_207420	chr1,chr1	+,-	CA6,SLC2A7	-79430,775
chr19:6331307-6331524	chr19	+	6331462	6331528	True	NM_006012,NM_133492	chr19,chr19	+,-	CLPP,ACER1	29934,2162
chr1:110152706-110154095	chr1	+	110152820	110153511	True	NM_139156,NM_005272,NM_004037	chr1,chr1,chr1	+,-,+	AMPD2,GNAT2,AMPD2	8947,2251,9764
chr5:176854977-176855302	chr5	+	176854979	176855351	True	NM_001004106,NM_000505,NM_001004105,NM_002082	chr5,chr5,chr5,chr5	+,-,+,+	GRK6,F12,GRK6,GRK6	-1343,-18402,-1343,-1343
chr11:62627087-62627418	chr11	+	62627170	62627271	True	NR_003098,NR_002559,NR_002561,NR_002563,NR_002562,NM_001012662,NR_002560,NM_001012664,NR_002565,NR_002564,NM_002394,NR_000008	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,-,+,-,+,-,-,+,-	SNHG1,SNORD29,SNORD30,SNORD27,SNORD28,SLC3A2,SNORD31,SLC3A2,SNORD25,SNORD26,SLC3A2,SNORD22	-3810,-5730,-5966,-4615,-5003,-3737,-6305,-3737,-4067,-4332,-3737,-6663
chr5:175135005-175136428	chr5	+	175135471	175136397	True	NM_022304,NM_032361	chr5,chr5	+,-	HRH2,THOC3	-27059,259198
chr1:230515116-230516272	chr1	+	230515137	230516102	True	NM_001145036,NM_024554	chr1,chr1	+,-	COG2,PGBD5	262099,-1746
chr13:20738543-20740294	chr13	+	20738782	20740031	True	NM_021954,NM_001190965	chr13,chr13	-,+	GJA3,ZMYM2	-3599,-205859
chr10:33225246-33226406	chr10	+	33225601	33226166	True	NM_024688,NM_033668	chr10,chr10	+,-	C10orf68,ITGB1	-369014,-1115
chr17:63097193-63097600	chr17	+	63097250	63097568	True	NM_006572,NM_001165933	chr17,chr17	-,+	GNA13,RGS9	-44330,35887
chrX:102467046-102467832	chrX	+	102467047	102467698	True	NM_001080425,NM_001127688,NM_001006684	chrX,chrX,chrX	+,+,-	BEX4,BEX4,TCEAL8	2321,2321,42473
chr2:6636318-6636732	chr2	+	6636368	6636762	True	NM_207315,NM_080657	chr2,chr2	-,+	CMPK2,RSAD2	369224,381033
chr4:114844214-114846149	chr4	+	114844284	114846071	True	NM_001128174,NM_024590	chr4,chr4	+,-	UGT8,ARSJ	673539,54857
chr5:132087462-132087844	chr5	+	132087513	132087887	True	NM_007054,NM_001039780	chr5,chr5	-,+	KIF3A,CCNI2	-14248,-4427
chr14:68063151-68065018	chr14	+	68063340	68065001	True	NM_001172,NM_004569	chr14,chr14	+,-	ARG2,PIGH	21577,2066
chr15:58282928-58284528	chr15	+	58283093	58284553	True	NM_020980,NM_170697	chr15,chr15	+,-	AQP9,ALDH1A2	145854,21732
chr22:41816994-41817521	chr22	+	41817340	41817423	True	NM_016272,NM_003216	chr22,chr22	-,+	TOB2,TEF	25661,-39439
chr12:122325435-122326547	chr12	+	122325580	122326424	True	NM_001171993,NM_002813	chr12,chr12	-,+	HPD,PSMD9	143,221
chr9:139784030-139784425	chr9	+	139784183	139784361	True	NM_153200,NM_021138	chr9,chr9	-,+	EDF1,TRAF2	-23445,-3269
chr16:3560560-3561906	chr16	+	3560796	3561890	True	NM_015041,NM_024793,NM_001080524	chr16,chr16,chr16	+,+,-	CLUAP1,CLUAP1,C16orf90	-9884,-953,-15375
chr9:127116798-127117128	chr9	+	127116849	127117168	True	NM_002799,NR_027406	chr9,chr9	-,+	PSMB7,LOC100129034	60603,-1148
chrX:39726573-39726960	chrX	+	39726660	39726952	True	NM_005765,NM_001123385	chrX,chrX	+,-	ATP6AP2,BCOR	713263,229817
chr3:108563231-108563613	chr3	+	108563275	108563342	True	NM_032579,NM_016388	chr3,chr3	-,+	RETNLB,TRAT1	-87145,-21698
chr9:86239719-86241453	chr9	+	86240130	86241214	True	NM_001190727,NM_013438,NM_001001551	chr9,chr9,chr9	+,-,+	C9orf103,UBQLN1,C9orf103	-2149,82004,-2149
chr1:13908586-13909630	chr1	+	13908615	13909537	True	NM_001006625,NM_001010847,NM_006474,NM_001006624,NM_198389	chr1,chr1,chr1,chr1,chr1	+,-,+,+,+	PDPN,LRRC38,PDPN,PDPN,PDPN	2429,-68373,714,2429,714
chr10:124209978-124211179	chr10	+	124210079	124210818	True	NM_001099667,NM_001010912	chr10,chr10	+,-	ARMS2,C10orf120	3360,248571
chr10:95757718-95759144	chr10	+	95757721	95759179	True	NR_002319,NM_016341	chr10,chr10	-,+	PIPSL,PLCE1	-36049,-4026
chr12:53713624-53714380	chr12	+	53713921	53714399	True	NM_021640,NM_001173466,NM_015665	chr12,chr12,chr12	+,-,-	C12orf10,AAAS,AAAS	-20502,1063,1063
chr9:138556541-138557254	chr9	+	138556625	138557217	True	NM_001001676,NM_182974	chr9,chr9	+,-	LCN9,GLT6D1	-1508,-25239
chr12:51441676-51441919	chr12	+	51441715	51441957	True	NM_001174125,NM_015416,NM_001024668	chr12,chr12,chr12	-,+,+	SLC11A2,LETMD1,LETMD1	-19657,126,126
chr18:11852027-11853912	chr18	+	11852369	11853743	True	NM_023075,NM_020412	chr18,chr18	-,+	MPPE1,CHMP1B	54948,-1044
chr12:76082351-76082834	chr12	+	76082401	76082833	True	NM_007043,NM_006851	chr12,chr12	-,+	KRR1,GLIPR1	-176983,-207944
chr16:33964249-33964507	chr16	+	33964309	33964379	True	NR_027080,NR_002837	chr16,chr16	+,-	LOC283914,UBE2MP1	633407,440433
chr7:27204452-27204692	chr7	+	27204527	27204721	True	NM_152739,NR_029911,NM_006896,NR_002795,NM_018951	chr7,chr7,chr7,chr7,chr7	-,-,-,+,-	HOXA9,MIR196B,HOXA7,HOXA11-AS1,HOXA10	478,4511,-8231,20305,9284
chr9:117094059-117095279	chr9	+	117094143	117095159	True	NM_000607,NM_000608,NM_030767	chr9,chr9,chr9	+,+,-	ORM1,ORM2,AKNA	-8891,-2125,61576
chr5:178773363-178773615	chr5	+	178773386	178773658	True	NM_021599,NM_014244,NM_025158	chr5,chr5,chr5	-,-,+	ADAMTS2,ADAMTS2,RUFY1	-955,-955,203912
chr1:33427728-33429036	chr1	+	33427941	33428819	True	NM_002143,NM_001127361,NM_153341	chr1,chr1,chr1	+,-,-	HPCA,RNF19B,RNF19B	-75895,1517,1517
chr12:52625895-52626335	chr12	+	52625936	52626332	True	NM_182507,NM_005556	chr12,chr12	-,+	KRT80,KRT7	-40152,621
chr5:148652559-148652947	chr5	+	148652572	148652790	True	NM_001146337,NM_152406,NM_014443	chr5,chr5,chr5	+,+,-	AFAP1L1,AFAP1L1,IL17B	-1222,-1222,106098
chr19:8569405-8569845	chr19	+	8569722	8569790	True	NM_032152,NM_001146175,NM_032370,NM_031203	chr19,chr19,chr19,chr19	-,-,-,+	PRAM1,ZNF414,ZNF414,HNRNPM	-2184,9312,9312,-59970
chr19:36858473-36859090	chr19	+	36858667	36859019	True	NM_020917,NR_033748	chr19,chr19	-,+	ZFP14,LOC644189	11136,53419
chr9:114365914-114366482	chr9	+	114365982	114366370	True	NM_001015882,NM_012212,NR_034087,NM_001146109,NM_001146108	chr9,chr9,chr9,chr9,chr9	+,-,-,-,-	DNAJC25,PTGR1,C9orf29,PTGR1,PTGR1	27261,-4271,9513,-3847,-3847
chr6:30908785-30909327	chr6_qbl_hap6	+	2201846	2202184	False	NM_205854,NM_080870	chr6_qbl_hap6,chr6_qbl_hap6	-,+	SFTA2,DPCR1	-8923,-156
chr6:30908785-30909327	chr6_mcf_hap5	+	2290814	2291152	False	NM_205854,NM_080870	chr6_mcf_hap5,chr6_mcf_hap5	-,+	SFTA2,DPCR1	-8923,-156
chr6:30908785-30909327	chr6_cox_hap2	+	2420786	2421124	False	NM_205854,NM_080870	chr6_cox_hap2,chr6_cox_hap2	-,+	SFTA2,DPCR1	-8911,-156
chr6:30908785-30909327	chr6	+	30908873	30909211	True	NM_205854,NM_080870	chr6,chr6	-,+	SFTA2,DPCR1	-8921,-156
chr6:30908785-30909327	chr6_dbb_hap3	+	2202989	2203327	False	NM_205854,NM_080870	chr6_dbb_hap3,chr6_dbb_hap3	-,+	SFTA2,DPCR1	-8927,-156
chr3:171759545-171759988	chr3	+	171759590	171760039	True	NM_001135095,NM_002662,NM_022763	chr3,chr3,chr3	+,-,+	FNDC3B,PLD1,FNDC3B	-1298,-231317,-2224
chrX:101409104-101409830	chrX	+	101409299	101409872	True	NM_001012978,NM_001159560,NM_080390	chrX,chrX,chrX	-,-,+	BEX5,BEX5,TCEAL2	1165,941,-28691
chr11:119206352-119206570	chr11	+	119206359	119206587	True	NM_015645,NM_032015	chr11,chr11	-,+	C1QTNF5,RNF26	10846,-1173
chr5:525028-525256	chr5	+	525239	525305	True	NM_007277,NM_004174	chr5,chr5	+,-	EXOC3,SLC9A3	-81956,-690
chr3:127538232-127539652	chr3	+	127538291	127539668	True	NM_207335,NM_001003794,NM_007283	chr3,chr3,chr3	+,-,-	KBTBD12,MGLL,MGLL	102233,2433,2083
chrX:33229983-33231262	chrX	+	33230123	33231192	True	NM_004006,NM_152631	chrX,chrX	-,+	DMD,FAM47B	-450,1729720
chr17:35734782-35736114	chr17	+	35734843	35736142	True	NM_198836,NM_173625	chr17,chr17	-,+	ACACA,C17orf78	-18784,-1909
chr1:151823232-151823693	chr1	+	151823245	151823667	True	NR_024237,NM_182578	chr1,chr1	+,-	LOC100132111,THEM5	-12351,2556
chr3:50365540-50365852	chr3	+	50365652	50365886	True	NM_007275,NM_033158,NM_007022,NM_170713,NM_170712,NM_003773	chr3,chr3,chr3,chr3,chr3,chr3	-,-,+,-,-,-	TUSC2,HYAL2,CYB561D2,RASSF1,RASSF1,HYAL2	16,-5371,22410,9059,9828,-5371
chr10:105240864-105241250	chr10	+	105240863	105241258	True	NM_001129742,NM_004210	chr10,chr10	-,+	CALHM3,NEURL	-1866,12476
chr1:76251984-76252358	chr1	+	76252000	76252407	True	NM_004582,NM_080868,NR_003042,NR_002749,NR_002748	chr1,chr1,chr1,chr1,chr1	+,-,+,+,+	RABGGTB,ASB17,SNORD45C,SNORD45A,SNORD45B	-165,145766,349,1166,2754
chr17:17208915-17210231	chr17	+	17208978	17210219	True	NM_003653,NM_020201	chr17,chr17	-,+	COPS3,NT5M	-24361,-2349
chr16:3702454-3703255	chr16	+	3702471	3703110	True	NM_005223,NM_032444	chr16,chr16	+,-	DNASE1,SLX4	40,-40886
chr6:106553704-106553914	chr6	+	106553732	106553802	True	NM_182907,NM_004849	chr6,chr6	+,-	PRDM1,ATG5	-6968,219943
chr22:38006047-38006441	chr22	+	38006106	38006334	True	NM_001172688,NM_013365,NM_001172687,NM_006498,NM_001001561,NM_001001560	chr22,chr22,chr22,chr22,chr22,chr22	+,+,+,-,+,+	GGA1,GGA1,GGA1,LGALS2,GGA1,GGA1	-1110,-1676,-1676,-30082,-1676,-1676
chr8:17941148-17941488	chr8	+	17941167	17941315	True	NM_177924,NM_001127505,NM_004315,NM_001160179	chr8,chr8,chr8,chr8	-,-,-,+	ASAH1,ASAH1,ASAH1,NAT1	614,1242,1242,86655
chr12:94945549-94946109	chr12	+	94945646	94946144	True	NM_016122,NR_027035	chr12,chr12	-,+	CCDC41,LOC144486	-91882,-91919
chr11:74444531-74445265	chr11	+	74444538	74445238	True	NM_015424,NM_001098638	chr11,chr11	-,+	CHRDL2,RNF169	-2352,14674
chr11:72974153-72975402	chr11	+	72974173	72975415	True	NM_014824,NM_176797,NM_176796,NM_176798,NM_004154	chr11,chr11,chr11,chr11,chr11	-,+,+,+,+	FCHSD2,P2RY6,P2RY6,P2RY6,P2RY6	-121030,154,154,5523,7831
chr10:104401726-104401978	chr10	+	104401757	104401925	True	NM_030912,NM_004311	chr10,chr10	+,-	TRIM8,ARL3	2326,72315
chr19:919170-919469	chr19	+	919344	919518	True	NM_138774,NM_005224,NM_032551	chr19,chr19,chr19	-,+,+	C19orf22,ARID3A,KISS1R	-6119,6518,-2053
chr13:99229963-99230507	chr13	+	99230105	99230506	True	NM_001032296,NR_036129	chr13,chr13	-,+	STK24,MIR3170	-709,-369378
chr21:40136621-40138560	chr21	+	40136700	40138488	True	NM_005239,NR_027066,NR_027065	chr21,chr21,chr21	+,-,-	ETS2,NCRNA00114,NCRNA00114	39360,2460,6963
chr12:9916331-9917617	chr12	+	9916771	9917633	True	NR_026671,NM_001781,NR_026672,NM_016523	chr12,chr12,chr12,chr12	-,-,-,+	CD69,CD69,CD69,KLRF1	-3274,-3274,-3274,62443
chr15:91568929-91570150	chr15	+	91568937	91569823	True	NM_018668,NM_033544	chr15,chr15	-,+	VPS33B,RCCD1	-3104,-70883
chr16:81479040-81479262	chr16	+	81479039	81479153	True	NM_001076780,NM_198390	chr16,chr16	-,+	PKD1L2,CMIP	-225064,-315
chr9:138415155-138415356	chr9	+	138415225	138415327	True	NM_144654,NM_002297	chr9,chr9	-,+	C9orf116,LCN1	-23464,-1990
chr22:19004600-19005954	chr22	+	19004776	19005651	True	NR_024157,NR_026651,NR_024159	chr22,chr22,chr22	-,+,+	DGCR11,DGCR10,DGCR9	30288,4485,108
chrY:298128-298649	chrY	+	298200	298647	True	NR_027232,NM_013239	chrY,chrY	+,-	NCRNA00107,PPP2R3B	-66866,-510
chrY:298128-298649	chrX	+	348200	348647	False	NR_027232,NM_013239	chrX,chrX	+,-	NCRNA00107,PPP2R3B	-66866,-510
chr22:30164436-30165345	chr22	+	30164497	30165215	True	NM_001003692,NM_013387,NM_001003684,NM_019103	chr22,chr22,chr22,chr22	-,+,+,-	ZMAT5,UQCR10,UQCR10,ZMAT5	-1528,-1191,-1191,-1528
chrX:135963199-135963551	chrX	+	135963249	135963565	True	NM_001164803,NR_002735,NM_002139,NM_000074,NR_028477,NR_028476	chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,+,-,-	RBMX,SNORD61,RBMX,CD40LG,RBMX,RBMX	-310,-1819,-310,-232972,-310,-310
chr8:136266772-136267984	chr8	+	136266843	136267959	True	NR_026706,NR_029599	chr8,chr8	+,-	LOC286094,MIR30D	-20520,-449655
chr2:20863643-20864979	chr2	+	20863840	20864954	True	NM_022460,NM_182828	chr2,chr2	-,+	HS1BP3,GDF7	-12976,1469
chr2:209025632-209026055	chr2	+	209025668	209025888	True	NM_014617,NM_001178000	chr2,chr2	-,+	CRYGA,PIKFYVE	2459,105102
chr20:5108359-5109621	chr20	+	5108557	5109636	True	NM_182649,NM_003818,NR_028370,NM_002592	chr20,chr20,chr20,chr20	-,+,+,-	PCNA,CDS2,PCNA-AS1,PCNA	-7910,-1126,-8376,-1289
chr6:2975112-2976847	chr6	+	2975111	2976588	True	NR_026855,NM_001195291,NM_004568	chr6,chr6,chr6	+,-,-	DKFZP686I15217,SERPINB6,SERPINB6	11612,-2712,-2712
chr17:17488506-17489116	chr17	+	17488669	17489123	True	NM_007169,NM_030665,NM_148172,NM_148173	chr17,chr17,chr17,chr17	-,+,-,-	PEMT,RAI1,PEMT,PEMT	-2924,95663,5921,-7890
chr11:128855072-128856466	chr11	+	128855588	128856500	True	NM_000890,NM_014715	chr11,chr11	+,-	KCNJ5,ARHGAP32	-94327,37638
chr2:74010619-74012215	chr2	+	74010935	74011970	True	NM_001080474,NM_003584	chr2,chr2	+,-	C2orf78,DUSP11	-244,-3651
chr2:74010619-74012215	chr2	+	74036000	74036054	False	NM_201647,NM_003584	chr2,chr2	+,-	STAMBP,DUSP11	20031,-28716
chrX:40034666-40035053	chrX	+	40034702	40034942	True	NM_001123384,NM_005765,NM_001123383	chrX,chrX,chrX	-,+,-	BCOR,ATP6AP2,BCOR	1690,405273,1690
chr6:43485125-43485796	chr6	+	43485232	43485818	True	NM_004875,NM_001012974,NM_203290,NM_015388	chr6,chr6,chr6,chr6	+,-,+,-	POLR1C,C6orf154,POLR1C,YIPF3	-492,-6808,-506,-504
chr17:10741741-10742362	chr17	+	10741756	10742310	True	NM_020233,NM_001101387	chr17,chr17	+,-	C17orf48,PIRT	-140880,-338
chr1:90097979-90098420	chr1	+	90098010	90098356	True	NR_033981,NM_032270	chr1,chr1	-,+	FLJ27354,LRRC8C	147,287
chr20:2645616-2646001	chr20	+	2645666	2646049	True	NR_004399,NM_006899,NR_002738,NR_002739,NM_174855,NM_174856	chr20,chr20,chr20,chr20,chr20,chr20	+,-,+,+,-,-	SNORD86,IDH3B,SNORD57,SNORD56,IDH3B,IDH3B	-8974,-823,-8132,-8447,-823,-823
chr19:55896278-55896531	chr19	+	55896367	55896579	True	NM_139172,NM_001190764,NM_000991,NM_001136135,NM_001136134,NM_001136137,NM_001136136	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+,+	TMEM190,LOC388564,RPL28,RPL28,RPL28,RPL28,RPL28	-8214,-740,720,720,720,720,720
chrX:1519962-1520170	chrY	+	1469991	1470207	False	NM_001636,NR_026710,NR_026711	chrY,chrY,chrY	-,+,+	SLC25A6,ASMTL-AS1,ASMTL-AS1	-8952,-618,-618
chrX:1519962-1520170	chrX	+	1519991	1520207	True	NM_001636,NR_026710,NR_026711	chrX,chrX,chrX	-,+,+	SLC25A6,ASMTL-AS1,ASMTL-AS1	-8952,-618,-618
chr10:89576309-89577486	chr10	+	89576370	89577435	True	NM_032810,NR_028492	chr10,chr10	-,+	ATAD1,CFLP1	532,634
chr19:52693173-52693429	chr19	+	52693180	52693442	True	NM_001102657,NR_033500,NM_014225	chr19,chr19,chr19	-,+,+	ZNF836,PPP2R1A,PPP2R1A	-18284,-176,-176
chr2:178739670-178740263	chr2	+	178739998	178740090	True	NM_001077196,NM_152945	chr2,chr2	-,+	PDE11A,RBM45	13434,237091
chr20:31444259-31444530	chr20	+	31444429	31444495	True	NM_012325,NM_053041	chr20,chr20	+,-	MAPRE1,COMMD7	-36787,-112615
chr1:221914606-221915126	chr1	+	221914630	221915160	True	NM_021958,NM_144729,NM_144728,NM_007207	chr1,chr1,chr1,chr1	+,-,-,-	HLX,DUSP10,DUSP10,DUSP10	-861939,406,-3828,406
chr20:30947067-30948709	chr20	+	30947088	30948570	True	NM_080616,NM_015338,NM_001164603	chr20,chr20,chr20	-,+,+	C20orf112,ASXL1,ASXL1	122776,-992,-992
chr6:49426986-49428192	chr6	+	49427074	49428235	True	NM_000255,NM_018132	chr6,chr6	-,+	MUT,CENPQ	2863,2860
chr6:26883595-26884276	chr6	+	26884161	26884320	True	NR_003504,NR_026775	chr6,chr6	-,+	GUSBL1,NCRNA00240	40074,40451
chr20:56972429-56974211	chr20	+	56972651	56973865	True	NM_004738,NR_003505,NR_036633,NM_001195677	chr20,chr20,chr20,chr20	+,-,+,+	VAPB,PPP4R1L,VAPB,VAPB	-8527,-88156,-8527,-8527
chrX:73835175-73837138	chrX	+	73835376	73836409	True	NM_183353,NM_016120,NM_006517	chrX,chrX,chrX	-,-,+	RLIM,RLIM,SLC16A2	-915,-915,-194343
chr19:49122779-49123028	chr19	+	49122866	49123026	True	NM_001204159,NM_001204158,NM_001204160,NM_000979,NM_017708,NM_020126	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,-,-,+	SPHK2,SPHK2,SPHK2,RPL18,FAM83E,SPHK2	-126,-369,5182,-433,-6172,-369
chr11:65623705-65624009	chr11	+	65623711	65624048	True	NM_025128,NM_005507	chr11,chr11	+,-	MUS81,CFL1	3823,1807
chr6:6678973-6679670	chr6	+	6679074	6679569	True	NM_004271,NR_026970	chr6,chr6	+,-	LY86,LY86-AS1	-90191,-56015
chr10:74385190-74385488	chr10	+	74385211	74385413	True	NM_138357,NM_006077,NM_001195518	chr10,chr10,chr10	+,-,-	CCDC109A,CBARA1,CBARA1	66475,586,586
chr11:62650413-62651138	chr11	+	62650419	62651137	True	NR_037193,NR_003098,NM_001013251	chr11,chr11,chr11	+,-,+	SLC3A2,SNHG1,SLC3A2	-1299,-27059,-2126
chr15:49442339-49443451	chr15	+	49442593	49443259	True	NM_001001556,NM_001143887,NM_004236,NR_036507	chr15,chr15,chr15,chr15	+,-,-,+	GALK2,COPS2,COPS2,LOC100306975	4716,4657,4657,5235
chr7:30083426-30083713	chr7	+	30083509	30083653	True	NM_017946,NM_001197027	chr7,chr7	-,+	FKBP14,PLEKHA8	-17241,-15583
chr8:37380880-37381517	chr8	+	37380933	37381222	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	172078,224397
chr1:100520064-100521734	chr1	+	100520118	100521109	True	NM_033055,NM_194292	chr1,chr1	+,-	HIAT1,SASS6	-16381,77458
chr16:1280052-1281196	chr16	+	1280377	1280945	True	NM_012467,NM_024164,NM_003294	chr16,chr16,chr16	-,-,+	TPSG1,TPSB2,TPSAB1	-5123,-192,9732
chr16:1280052-1281196	chr16	-	1290039	1290089	False	NM_024164,NM_003294	chr16,chr16	-,+	TPSB2,TPSAB1	-9854,588
chr4:74468727-74470059	chr4	+	74468896	74469927	True	NM_177532,NM_001133	chr4,chr4	-,+	RASSF6,AFM	16264,-121490
chr21:41239353-41239992	chr21	+	41239467	41239992	True	NR_026543,NM_006198	chr21,chr21	-,+	C21orf88,PCP4	-254718,-171
chr17:43303557-43303851	chr17	+	43303592	43303900	True	NM_152343,NM_005892	chr17,chr17	-,+	C17orf46,FMNL1	35629,-4351
chr17:29150302-29151484	chr17	+	29150532	29151436	True	NM_015986,NM_024857	chr17,chr17	-,+	CRLF3,ATAD5	392,7586
chr12:53773054-53773600	chr12	+	53773093	53773631	True	NM_138473,NM_001173467,NM_003109	chr12,chr12,chr12	+,-,+	SP1,SP7,SP1	347,-43089,796
chr6:71278960-71279240	chr6	+	71279162	71279286	True	NM_145267,NM_001851	chr6,chr6	+,-	C6orf57,COL9A1	-2588,-266376
chr2:234525616-234526613	chr2	+	234525742	234526650	True	NM_019076,NM_018218	chr2,chr2	+,-	UGT1A8,USP40	154,-51506
chr1:22137304-22137628	chr1	+	22137310	22137512	True	NM_001032730,NM_001013693	chr1,chr1	-,+	USP48,LDLRAD2	-27622,1245
chr1:151118486-151118792	chr1	+	151118586	151118720	True	NM_001178061,NM_030913,NM_001178062,NM_024575	chr1,chr1,chr1,chr1	-,-,-,+	SEMA6C,SEMA6C,SEMA6C,TNFAIP8L2	470,470,470,10384
chr19:7600177-7600398	chr19	+	7600339	7600445	True	NM_080662,NM_001166112,NM_001166113,NM_001166111,NM_006702,NM_001166114	chr19,chr19,chr19,chr19,chr19,chr19	-,+,+,+,+,+	PEX11G,PNPLA6,PNPLA6,PNPLA6,PNPLA6,PNPLA6	-46434,-1262,-754,-799,-1352,143
chr5:72020184-72020863	chr5	+	72020244	72020745	True	NM_152625,NM_002270	chr5,chr5	-,+	ZNF366,TNPO1	-216995,91672
chr3:50275405-50275636	chr3	+	50275409	50275605	True	NM_002070,NM_001166425,NM_006764	chr3,chr3,chr3	+,+,-	GNAI2,GNAI2,IFRD2	-1813,8720,54471
chr8:144328204-144328555	chr8	+	144328328	144328586	True	NM_173832,NM_001130478	chr8,chr8	+,-	ZFP41,LY6H	522,-86275
chr19:57630566-57630881	chr19	+	57630651	57630761	True	NM_020903,NM_052882	chr19,chr19	+,-	USP29,ZIM3	747,25859
chr19:35625083-35625337	chr19	+	35625128	35625314	True	NM_005031,NM_021902,NM_139284,NM_022006	chr19,chr19,chr19,chr19	+,+,-,+	FXYD1,FXYD1,LGI4,FXYD7	5077,4417,914,8839
chr17:79318376-79318770	chr17	+	79318391	79318629	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	54910,-13917
chrX:1511927-1512402	chrY	+	1461967	1462321	False	NM_001636,NR_026710,NR_026711	chrY,chrY,chrY	-,+,+	SLC25A6,ASMTL-AS1,ASMTL-AS1	-928,7102,7102
chrX:1511927-1512402	chrX	+	1511967	1512321	True	NM_001636,NR_026710,NR_026711	chrX,chrX,chrX	-,+,+	SLC25A6,ASMTL-AS1,ASMTL-AS1	-928,7102,7102
chr9:35790932-35791400	chr9	+	35790998	35791434	True	NM_003995,NM_172312	chr9,chr9	+,-	NPR2,SPAG8	971,20875
chr5:135171177-135171554	chr5	+	135171184	135171452	True	NM_145282,NM_000590	chr5,chr5	+,-	SLC25A48,IL9	-870,60114
chr7:143991705-143991930	chr7	+	143991722	143991844	True	NR_002158,NR_033942,NR_002157	chr7,chr7,chr7	+,-,+	OR2A20P,LOC728377,OR2A9P	4621,-8626,4769
chr7:143991705-143991930	chr7	+	143893142	143893264	False	NM_001003702,NM_198495	chr7,chr7	-,+	ARHGEF35,CTAGE4	-351,-12645
chr7:143991705-143991930	chr7	-	144051960	144052082	False	NM_005435,NM_001080413	chr7,chr7	+,-	ARHGEF5,NOBOX	406,48754
chr8:107710108-107711734	chr8	+	107710299	107711750	True	NM_001198534,NM_139166	chr8,chr8	+,-	OXR1,ABRA	26584,70784
chr12:118456505-118456706	chr12	+	118456609	118456691	True	NM_018639,NM_181578,NM_007370,NM_001130113,NM_001130112	chr12,chr12,chr12,chr12,chr12	-,+,+,+,+	WSB2,RFC5,RFC5,RFC5,RFC5	42310,-2159,-2159,-2159,-2159
chr10:98112885-98114572	chr10	+	98112971	98114431	True	NM_033207,NM_001040102,NM_001040103,NM_004088	chr10,chr10,chr10,chr10	-,-,-,+	OPALIN,OPALIN,OPALIN,DNTT	4711,4711,4711,-48945
chr6:24403672-24404509	chr6	+	24403724	24404533	True	NM_001195610,NM_020662	chr6,chr6	-,+	DCDC2,MRS2	-20204,-628
chr7:45929022-45930537	chr7	+	45929075	45930293	True	NM_000596,NM_000598	chr7,chr7	+,-	IGFBP1,IGFBP3	-1174,30628
chr18:22048299-22049823	chr18	+	22048551	22049486	True	NM_021624,NM_001160166,NM_080597,NM_001143828	chr18,chr18,chr18,chr18	+,+,-,+	HRH4,HRH4,OSBPL1A,HRH4	-8011,-8011,-70761,-8011
chr7:116598722-116600402	chr7	+	116599113	116600237	True	NR_002329,NR_002330,NM_021908,NM_018412	chr7,chr7,chr7,chr7	+,-,+,+	ST7OT4,ST7OT1,ST7,ST7	-5218,-4725,-5790,-5790
chr3:193268360-193269504	chr3	+	193268651	193269369	True	NM_032279,NM_015560	chr3,chr3	-,+	ATP13A4,OPA1	3380,41563
chr12:56363996-56364835	chr12	+	56364134	56364809	True	NM_001798,NM_002868,NM_001200053,NM_006928,NM_001200054,NM_052827	chr12,chr12,chr12,chr12,chr12,chr12	+,+,-,-,-,+	CDK2,RAB5B,PMEL,PMEL,PMEL,CDK2	-3629,3052,-4288,-3638,-4288,-3629
chr9:33474747-33475776	chr9	+	33474797	33475625	True	NM_022917,NR_003573,NM_139235	chr9,chr9,chr9	-,+,-	NOL6,ANXA2P2,NOL6	-856,148597,-856
chr11:32606277-32607556	chr11	+	32606348	32607339	True	NM_024426,NM_006360	chr11,chr11	-,+	WT1,EIF3M	-149267,-1008
chr1:165600194-165600563	chr1	+	165600199	165600543	True	NM_004528,NR_026744	chr1,chr1	+,-	MGST3,LOC400794	-94,-48858
chr17:65712077-65712520	chr17	+	65712209	65712325	True	NM_015462,NM_181655	chr17,chr17	+,-	NOL11,C17orf58	1735,277490
chr3:42136832-42137835	chr3	+	42136934	42137646	True	NM_001042646,NM_017886	chr3,chr3	+,-	TRAK1,ULK4	-4247,-133274
chr5:138725283-138726599	chr5	+	138725401	138726619	True	NM_001033112,NM_016459,NM_005847,NM_152685,NM_001161546	chr5,chr5,chr5,chr5,chr5	+,-,-,-,-	PAIP2,MZB1,SLC23A1,SLC23A1,LOC389333	-47318,204,-6362,-6362,4316
chr21:38733942-38735312	chr21	+	38734149	38734881	True	NM_101395,NM_006052	chr21,chr21	+,-	DYRK1A,DSCR3	4977,-94316
chr9:130379001-130379709	chr9	+	130379042	130379504	True	NM_003165,NM_001032221,NM_001035534	chr9,chr9,chr9	+,+,-	STXBP1,STXBP1,FAM129B	-4609,-4609,-37774
chr13:114055182-114055775	chr13	+	114055219	114055757	True	NM_024719,NM_017905	chr13,chr13	-,+	GRTP1,TMCO3	-36756,89550
chr19:1270152-1271409	chr19	+	1270263	1271409	True	NR_027271,NM_017914,NR_023313,NM_001280,NR_023312	chr19,chr19,chr19,chr19,chr19	-,+,+,+,+	C19orf23,C19orf24,CIRBP,CIRBP,CIRBP	-4,4110,-1047,-1047,-1047
chr1:156269046-156269458	chr1	+	156269046	156269295	True	NM_144580,NM_032323,NM_001004319	chr1,chr1,chr1	-,+,-	C1orf85,TMEM79,VHLL	-3597,-15028,184
chr19:49545978-49546861	chr19	+	49546233	49546643	True	NR_004383,NM_033183,NM_033377,NM_033043	chr19,chr19,chr19,chr19	+,-,-,+	SNAR-G1,CGB8,CGB1,CGB5	-6016,5775,-6042,458
chr19:49545978-49546861	chr19	-	49552822	49553281	False	NM_033183,NM_033043,NM_033142	chr19,chr19,chr19	-,+,-	CGB8,CGB5,CGB7	-454,-6180,6175
chr2:38893550-38894784	chr2	+	38893591	38894507	True	NM_138801,NM_138394	chr2,chr2	+,-	GALM,HNRPLL	-590,-63413
chr19:1408058-1408362	chr19	+	1408125	1408357	True	NM_138924,NM_018959,NM_170711,NM_000156	chr19,chr19,chr19,chr19	-,+,+,-	GAMT,DAZAP1,DAZAP1,GAMT	-6573,-592,-592,-6573
chr14:70346124-70346370	chr14	+	70346159	70346417	True	NM_001034852,NM_003049,NM_022137	chr14,chr14,chr14	+,-,+	SMOC1,SLC10A1,SMOC1	-96,-82153,-96
chr1:8018436-8019811	chr1	+	8018537	8019795	True	NM_001561,NM_007262,NM_001123377	chr1,chr1,chr1	-,+,+	TNFRSF9,PARK7,PARK7	-15312,1918,1918
chr1:202161359-202162062	chr1	+	202161624	202162046	True	NR_037664,NM_001017403	chr1,chr1	-,+	PTPN7,LGR6	-30908,1071
chr9:129572870-129574196	chr9	+	129573078	129573884	True	NM_014007,NM_001135776,NM_012098	chr9,chr9,chr9	+,+,-	ZBTB43,ZBTB43,ANGPTL2	-5844,-5844,311211
chr2:74701782-74702665	chr2	+	74701971	74702541	True	NM_001146158,NM_053050,NR_027749,NM_006302,NM_032779,NM_022492	chr2,chr2,chr2,chr2,chr2,chr2	-,-,+,-,-,+	MOGS,MRPL53,TTC31,MOGS,CCDC142,TTC31	-9434,-2029,7658,-9434,7866,7658
chrY:9171489-9172439	chrY	+	9171644	9172254	True	NR_001546,NM_001164471	chrY,chrY	-,+	TTTY20,TSPY4	237,23197
chr18:56288662-56289298	chr18	+	56288872	56289132	True	NM_006785,NM_052947	chr18,chr18	+,-	MALT1,ALPK2	49485,7107
chr1:52197303-52198921	chr1	+	52197574	52198810	True	NR_031580,NM_148905,NM_148904,NM_148907	chr1,chr1,chr1,chr1	-,+,+,+	MIR761,OSBPL9,OSBPL9,OSBPL9	103315,-2139,-2139,-2139
chr15:100344733-100346111	chr15	+	100344753	100346082	True	NR_003260,NM_001130928	chr15,chr15	-,+	DNM1P46,MEF2A	1100,-171621
chr15:100344733-100346111	chr15	-	102287057	102288382	False	NM_152334,NM_001005326	chr15,chr15	-,+	TARSL2,OR4F6	-22412,57540
chr5:80692598-80693284	chr5	+	80693052	80693330	True	NM_032280,NM_130767	chr5,chr5	+,-	ZCCHC9,ACOT12	-95701,-3064
chr5:124193377-124194251	chr5	+	124193539	124193961	True	NM_004384,NM_020747	chr5,chr5	+,-	CSNK1G3,ZNF608	-1345797,-112734
chr10:106399884-106400207	chr10	+	106400007	106400177	True	NM_033397,NM_014978	chr10,chr10	-,+	ITPRIP,SORCS3	-306344,681
chr2:23693962-23695358	chr2	+	23694225	23695117	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	454874,-85985
chr3:128878959-128879162	chr3	+	128879031	128879206	True	NM_001199469,NM_001204890,NM_016128,NM_020701	chr3,chr3,chr3,chr3	-,-,+,-	ISY1,ISY1-RAB43,COPG,ISY1	918,918,89246,918
chr17:73778798-73780686	chr17	+	73779246	73780600	True	NM_005324,NM_001080419	chr17,chr17	-,+	H3F3B,UNK	-3386,80
chrX:21675321-21675670	chrX	+	21675354	21675656	True	NM_015884,NM_153270	chrX,chrX	+,-	MBTPS2,KLHL34	181999,842
chr17:56232672-56232903	chr17	+	56232684	56232800	True	NR_002307,NM_017777,NM_012374	chr17,chr17,chr17	+,-,+	MSX2P1,MKS1,OR4D1	1519,63916,-221
chr12:80301533-80303232	chr12	+	80301766	80302908	True	NM_001143886,NM_173591	chr12,chr12	-,+	PPP1R12A,OTOGL	4833,300324
chr19:40031731-40032506	chr19	+	40031773	40032323	True	NM_152361,NM_153232,NM_182704	chr19,chr19,chr19	-,-,+	EID2B,EID2,SELV	-8279,-935,-26078
chr11:35165240-35165797	chr11	+	35165336	35165846	True	NM_001001390,NM_001001391,NM_001001392,NM_000610,NM_001202555,NM_001202557,NM_001202556,NM_015957,NM_001001389	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,+,+,-,+	CD44,CD44,CD44,CD44,CD44,CD44,CD44,APIP,CD44	-4970,-4970,-4970,-4970,-4970,-4970,-4970,-227397,-4970
chr8:8025382-8026312	chr8	+	8025397	8025737	True	NR_031689,NR_024362	chr8,chr8	-,+	MIR548I3,FLJ10661	-78786,60354
chr8:8025382-8026312	chr8	-	12355159	12355299	False	NR_026789,NM_001137610	chr8,chr8	+,-	FAM66A,FAM86B2	-135682,-61307
chr21:31587608-31588017	chr21	+	31587622	31588060	True	NM_199328,NM_181599	chr21,chr21	-,+	CLDN8,KRTAP13-1	459,180331
chr19:40509773-40510155	chr19	+	40510046	40510132	True	NM_001005851,NM_178544	chr19,chr19	-,+	ZNF780B,ZNF546	52039,-7162
chr1:40157342-40157776	chr1	+	40157364	40157720	True	NM_203456,NM_016257	chr1,chr1	+,-	PPIE,HPCAL4	46796,-275
chr12:6482783-6484014	chr12	+	6482787	6483807	True	NM_001159576,NM_002342,NM_001159575,NM_001038	chr12,chr12,chr12,chr12	-,+,-,-	SCNN1A,LTBR,SCNN1A,SCNN1A	633,9549,2766,1148
chr1:3543765-3544305	chr1	+	3543911	3544169	True	NM_001409,NM_182752	chr1,chr1	-,+	MEGF6,TPRG1L	-15852,-2414
chr3:42917158-42918399	chr3	+	42917301	42918193	True	NM_207404,NM_004391	chr3,chr3	+,-	ZNF662,CYP8B1	29208,-84
chr19:17862128-17862383	chr19	+	17862137	17862429	True	NM_001161359,NM_001161358,NM_001080421,NM_015122,NM_001161357	chr19,chr19,chr19,chr19,chr19	+,+,-,+,+	FCHO1,FCHO1,UNC13A,FCHO1,FCHO1	-46,-3661,-63129,-46,-3661
chr16:57276345-57276769	chr16	+	57276401	57276717	True	NM_015993,NM_012106	chr16,chr16	-,+	PLLP,ARL2BP	41917,2320
chr19:41082403-41082614	chr19	+	41082473	41082603	True	NM_000713,NM_138392	chr19,chr19	-,+	BLVRB,SHKBP1	-110748,153
chr1:75121832-75123445	chr1	+	75121928	75123492	True	NM_001162916,NM_001002912	chr1,chr1	+,-	TYW3,C1orf173	75343,15980
chr19:19247147-19247629	chr19	+	19247498	19247622	True	NM_017814,NM_003721	chr19,chr19	-,+	TMEM161A,RFXANK	1695,55385
chr2:11273555-11273840	chr2	+	11273608	11273842	True	NM_182500,NM_004850	chr2,chr2	+,-	C2orf50,ROCK2	-480,210919
chr2:55458240-55458847	chr2	+	55458412	55458860	True	NM_152385,NM_002954,NM_001135592,NM_001177413,NM_001135598	chr2,chr2,chr2,chr2,chr2	-,+,+,+,-	C2orf63,RPS27A,RPS27A,RPS27A,C2orf63	639,680,178,953,889
chr20:42187630-42188854	chr20	+	42187678	42188821	True	NM_016276,NM_001199264,NM_001008901,NM_170693	chr20,chr20,chr20,chr20	+,+,-,+	SGK2,SGK2,GTSF1L,SGK2	5915,4933,166880,-94
chr17:72734891-72735548	chr17	+	72735021	72735433	True	NM_001163990,NM_001006638,NR_037409,NM_004252,NM_001163989,NM_139018	chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,-	RAB37,RAB37,MIR3615,SLC9A3R1,RAB37,CD300LF	-1716,-1716,9318,9329,-2113,-25913
chr1:155714803-155715237	chr1	+	155714855	155715241	True	NM_139118,NR_024117	chr1,chr1	-,+	YY1AP1,MSTO2P	-56032,367
chr2:173419620-173420044	chr2	+	173419729	173420093	True	NR_026995,NM_002610	chr2,chr2	-,+	LOC91149,PDK1	180891,685
chr6:161067519-161069058	chr6	+	161067920	161069049	True	NM_001168338,NM_005577	chr6,chr6	+,-	PLG,LPA	54175,18413
chr19:3028877-3029078	chr19	+	3028897	3029063	True	NM_003260,NM_001144762,NM_024760	chr19,chr19,chr19	-,-,+	TLE2,TLE2,TLE6	152,599,-51412
chr2:37382148-37383384	chr2	+	37382214	37383238	True	NM_001135651,NR_037879,NM_001135652,NM_002759	chr2,chr2,chr2,chr2	-,+,-,-	EIF2AK2,LOC100505876,EIF2AK2,EIF2AK2	1002,40396,-7249,1002
chr14:24554263-24555083	chr14	+	24554396	24554997	True	NM_001018073,NM_006177,NM_004563	chr14,chr14,chr14	+,-,+	PCK2,NRL,PCK2	8485,-564,8485
chr9:37552600-37553329	chr9	+	37552768	37553383	True	NM_022490,NM_012166	chr9,chr9	+,-	POLR1E,FBXO10	-66874,22924
chr13:28000952-28002736	chr13	+	28001046	28002650	True	NM_002097,NM_001166262	chr13,chr13	+,-	GTF3A,MTIF3	-2416,21727
chr1:27339172-27339394	chr1	+	27339277	27339409	True	NM_052943,NM_001013642	chr1,chr1	-,+	FAM46B,TRNP1	12,-19133
chr2:107114986-107115535	chr2	+	107115118	107115558	True	NM_001144013,NR_003506	chr2,chr2	-,+	RGPD3,PLGLA	-30317,-112401
chr2:107114986-107115535	chr2	-	87077665	87077716	False	NR_037931,NM_001178100	chr2,chr2	+,-	LOC100286979,CD8B	11231,11382
chr19:1239604-1239885	chr19	+	1239694	1239900	True	NM_001001975,NM_177401,NM_001687,NM_152769	chr19,chr19,chr19,chr19	+,+,+,-	ATP5D,MIDN,ATP5D,C19orf26	1848,8651,1848,-1704
chr16:21224659-21225630	chr16	+	21224708	21225660	True	NM_145865,NM_003460	chr16,chr16	+,-	ANKS4B,ZP2	19355,-1840
chr15:89346486-89346761	chr15	+	89346622	89346810	True	NM_001135,NM_178232,NM_013227	chr15,chr15,chr15	+,-,+	ACAN,HAPLN3,ACAN	1,92010,1
chr2:89062619-89064513	chr2	+	89063584	89064298	True	NM_004836,NR_015424	chr2,chr2	-,+	EIF2AK3,ANKRD36BP2	-136490,1120
chr9:69180461-69180927	chr9	+	69180847	69180949	True	NR_015361,NM_001098805	chr9,chr9	-,+	LOC440896,ANKRD20A4	142,201031
chr9:69180461-69180927	chr9	-	70938614	70938716	False	NR_015423,NM_199135	chr9,chr9	-,+	LOC572558,FOXD4L3	34091,-20882
chr8:17556817-17557690	chr8	+	17557012	17557696	True	NM_020749,NM_006207	chr8,chr8	-,+	MTUS1,PDGFRL	-1766,-123121
chr11:22644862-22645394	chr11	+	22644911	22645240	True	NM_001143830,NM_022725	chr11,chr11	+,-	GAS2,FANCF	42919,2203
chr19:56633157-56633360	chr19	+	56633166	56633398	True	NM_001002836,NM_018337	chr19,chr19	-,+	ZNF787,ZNF444	-517,19157
chr6:14751553-14752204	chr6	+	14751696	14752237	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	494289,911103
chr4:145053327-145054643	chr4	+	145053360	145054170	True	NM_022475,NM_002099	chr4,chr4	+,-	HHIP,GYPA	512977,7784
chr3:129038116-129039201	chr3	+	129038185	129039051	True	NM_006026,NR_026991	chr3,chr3	-,+	H1FX,C3orf47	-3065,-3122
chr17:39410663-39410918	chr17	+	39410812	39410926	True	NM_030975,NM_001146182,NM_033191	chr17,chr17,chr17	+,-,+	KRTAP9-9,KRTAP16-1,KRTAP9-4	709,54637,-4924
chr3:46874456-46874789	chr3	+	46874487	46874723	True	NM_000316,NM_182702	chr3,chr3	+,-	PTH1R,PRSS42	44512,912
chr20:13619567-13620427	chr20	+	13619796	13620196	True	NM_001039375,NM_017714	chr20,chr20	+,-	C20orf7,TASP1	145475,-213
chr4:83953750-83955586	chr4	+	83954243	83955475	True	NM_016129,NM_001115007	chr4,chr4	+,-	COPS4,LIN54	763,-20203
chr14:23480390-23481204	chr14	+	23480526	23480880	True	NM_001130706,NM_021944,NM_001130708,NM_001099780	chr14,chr14,chr14,chr14	-,-,-,+	C14orf93,C14orf93,C14orf93,PSMB11	-1166,-1166,-1166,30495
chr1:173744040-173744827	chr1	+	173744296	173744874	True	NM_018122,NM_001171182	chr1,chr1	+,-	DARS2,CENPL	48922,48446
chr9:139885177-139886302	chr9	+	139885315	139886351	True	NM_183241,NM_004669,NM_207510	chr9,chr9,chr9	+,-,+	C9orf142,CLIC3,LCNL1	518,4723,-7921
chr4:1341462-1341774	chr4	+	1341582	1341822	True	NM_001328,NM_020894	chr4,chr4	-,+	CTBP1,KIAA1530	-98674,-529
chr17:74532032-74532970	chr17	+	74532147	74532673	True	NM_134268,NM_001077620,NR_033357	chr17,chr17,chr17	-,+,+	CYGB,PRCD,PRCD	1159,3447,-8530
chr19:46476337-46476590	chr19	+	46476501	46476561	True	NM_002516,NM_001080402	chr19,chr19	-,+	NOVA2,CCDC61	146,21777
chr22:40391615-40391974	chr22	+	40391683	40391955	True	NM_152512,NM_138435	chr22,chr22	-,+	ENTHD1,FAM83F	-101889,-781
chrX:49092230-49092461	chrX	+	49092352	49092480	True	NM_005183,NM_014008	chrX,chrX	-,+	CACNA1F,CCDC22	-2519,-476
chr21:30747499-30748126	chr21	+	30747639	30748003	True	NR_027655,NM_006585	chr21,chr21	+,-	BACH1,CCT8	-70136,-301629
chr17:65992253-65992541	chr17_ctg5_hap1	+	521981	522177	False	NM_001193465,NM_014834	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	KIAA1267,LRRC37A	41320,-63377
chr17:65992253-65992541	chr17_ctg5_hap1	-	1210860	1211056	False	NR_026901,NR_037772	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LOC644172,CRHR1	-22472,-40407
chr17:65992253-65992541	chr17	+	65992267	65992541	True	NM_002266,NM_181656,NM_181655	chr17,chr17,chr17	+,-,-	KPNA2,C17orf58,C17orf58	39306,-2502,-2502
chr17:65992253-65992541	chr17	-	44343814	44344010	False	NM_001193465,NM_014834	chr17,chr17	-,+	KIAA1267,LRRC37A	-41074,28486
chr6:101299822-101300181	chr6	+	101299854	101300202	True	NM_001166247,NM_006828	chr6,chr6	+,-	GRIK2,ASCC3	546658,29072
chr8:121824294-121824670	chr8	+	121824386	121824716	True	NM_021021,NM_022045	chr8,chr8	-,+	SNTB1,MTBP	-77,-366771
chr16:56759267-56760523	chr16	+	56759763	56760431	True	NM_005950,NM_014669	chr16,chr16	-,+	MT1G,NUP93	-57786,3585
chr19:18046804-18047180	chr19	+	18046999	18047111	True	NM_001136203,NM_138442,NM_000215	chr19,chr19,chr19	+,+,-	CCDC124,CCDC124,JAK3	-3226,-1145,-88158
chr15:42185668-42186708	chr15	+	42185714	42186678	True	NM_016642,NM_001114633	chr15,chr15	-,+	SPTBN5,PLA2G4B	-39,-54754
chr19:22820072-22821085	chr19	+	22820291	22821134	True	NM_020855,NM_001080409	chr19,chr19	+,-	ZNF492,ZNF99	-3216,131706
chr2:232063088-232063324	chr2	+	232063126	232063212	True	NM_025139,NM_000867	chr2,chr2	+,-	ARMC9,HTR2B	129,-73302
chr12:506072-506971	chr12	+	506354	506722	True	NM_001130146,NM_001042603,NM_001130148,NM_032358,NM_001130147	chr12,chr12,chr12,chr12,chr12	+,-,+,+,+	CCDC77,KDM5A,CCDC77,CCDC77,CCDC77	4018,-7734,-7896,4018,-7896
chr4:169930427-169930707	chr4	+	169930526	169930614	True	NM_001166110,NM_032783	chr4,chr4	+,-	PALLD,CBR4	-177425,904
chr2:28115006-28116582	chr2	+	28115172	28116564	True	NM_004899,NM_199191,NM_199192,NM_199193,NM_199194,NM_022128,NR_028308	chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,+,-,-	BRE,BRE,BRE,BRE,BRE,RBKS,LOC100302650	-1678,-1678,-1678,-1753,-1753,-1949,-1191
chr12:123187164-123187446	chr12	+	123187259	123187371	True	NM_003677,NM_177551	chr12,chr12	+,-	DENR,GPR109A	49999,583
chr19:44006901-44007950	chr19	+	44007040	44007948	True	NM_198850,NM_174945	chr19,chr19	-,+	PHLDB3,ZNF575	1087,29391
chr13:51681780-51682012	chr13	+	51681790	51682040	True	NR_003923,NM_145019	chr13,chr13	-,+	GUCY1B2,FAM124A	-41497,114466
chr11:104869953-104871089	chr11	+	104870200	104870986	True	NM_001077244,NM_001136109	chr11,chr11	+,-	GRIA4,CASP5	609813,22959
chr6:158958195-158958554	chr6	+	158958328	158958506	True	NM_006519,NM_020823	chr6,chr6	-,+	DYNLT1,TMEM181	107348,-911
chr17:33768986-33769621	chr17	+	33769173	33769319	True	NM_144682,NR_003037,NM_018042	chr17,chr17,chr17	-,+,-	SLFN13,SNORD7,SLFN12	6587,131356,-9630
chr15:28565553-28567114	chr15	+	28565559	28566973	True	NM_004667,NR_033351	chr15,chr15	-,+	HERC2,GOLGA8F	373,56810
chr15:28565553-28567114	chr15	-	28836193	28836261	False	NR_036443,NR_033351	chr15,chr15	+,-	HERC2P9,GOLGA8F	63326,-58050
chr15:28565553-28567114	chr15	+	23377845	23377896	False	NR_002824,NR_036470	chr15,chr15	-,+	HERC2P2,HERC2P7	414,12825
chr15:28565553-28567114	chr15	+	20709786	20711116	False	NR_036432,NR_027411	chr15,chr15	-,+	HERC2P3,GOLGA8C	368,56557
chr21:34850296-34850935	chr21	+	34850842	34850902	True	NM_032195,NM_006134	chr21,chr21	+,-	SON,TMEM50B	64447,1429
chr3:36985165-36985514	chr3	+	36985169	36985533	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	1065,49307
chr8:145026272-145026751	chr8	+	145026433	145026797	True	NM_000837,NR_030383,NM_201379,NM_201381,NM_201380,NM_201383,NM_201382	chr8,chr8,chr8,chr8,chr8,chr8,chr8	+,-,-,-,-,-,-	GRINA,MIR661,PLEC,PLEC,PLEC,PLEC,PLEC	37428,-6986,1341,-7528,-1389,-9741,-8323
chr22:24403197-24404196	chr22	+	24403273	24404219	True	NR_003082,NM_012295,NM_001201429,NM_001199281	chr22,chr22,chr22,chr22	-,+,+,+	GSTTP2,CABIN1,CABIN1,CABIN1	-1374,3545,3545,3600
chr22:24403197-24404196	chr22	+	24350594	24351306	False	NM_001144931,NR_003081	chr22,chr22	+,-	LOC391322,GSTTP1	21810,-3336
chr5:40681970-40682190	chr5	+	40682033	40682231	True	NM_012382,NM_000958	chr5,chr5	-,+	TTC33,PTGER4	73891,-2052
chr11:130639499-130640096	chr11	+	130639654	130640142	True	NM_139055,NM_014758	chr11,chr11	+,-	ADAMTS15,SNX19	-320843,146290
chr16:82044898-82045110	chr16	+	82044985	82045159	True	NM_002153,NM_145168	chr16,chr16	+,-	HSD17B2,SDR42E1	23698,-8
chr6:148664418-148666050	chr6	+	148664571	148665674	True	NR_034115,NM_015278	chr6,chr6	-,+	LOC729178,SASH1	-1138821,-902
chr3:69433157-69434389	chr3	+	69433226	69434389	True	NM_006407,NM_015123	chr3,chr3	+,-	ARL6IP5,FRMD4B	-299201,1091
chr12:131005139-131005539	chr12	+	131005307	131005486	True	NM_004764,NM_015347	chr12,chr12	+,-	PIWIL1,RIMBP2	-182925,-2897
chr20:23343384-23344168	chr20	+	23343427	23343899	True	NM_022482,NM_022080	chr20,chr20	+,-	GZF1,NAPB	1121,58307
chr1:158641281-158642712	chr1	+	158641285	158642591	True	NM_001004478,NM_003126	chr1,chr1	+,-	OR10Z1,SPTA1	-65107,13965
chr9:140080848-140082030	chr9	+	140081117	140081751	True	NM_003731,NM_013366	chr9,chr9	+,-	SSNA1,ANAPC2	1302,1356
chr11:60638624-60638901	chr11	+	60638671	60638919	True	NM_004778,NM_207341	chr11,chr11	-,+	GPR44,ZP1	-15227,-3707
chr14:24672176-24672889	chr14	+	24672233	24672690	True	NM_006405,NM_001014842,NM_174944,NM_001184739	chr14,chr14,chr14,chr14	-,-,+,+	TM9SF1,TM9SF1,TSSK4,TSSK4	-7351,-7351,2235,2235
chr12:10182595-10183165	chr12	+	10182650	10183178	True	NM_016509,NM_207345	chr12,chr12	-,+	CLEC1B,CLEC9A	-30751,97
chr15:25305074-25305785	chr15	+	25305091	25305811	True	NR_003322,NR_003317,NR_003320,NR_003321,NR_003324,NR_003316,NR_003323,NR_003319,NR_003318,NM_130838	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,-	SNORD116-7,SNORD116-2,SNORD116-5,SNORD116-6,SNORD116-9,SNORD116-1,SNORD116-8,SNORD116-4,SNORD116-3,UBE3A	1667,4360,1667,4360,-3136,-8519,9766,-458,-3136,344892
chr2:234601802-234602445	chr2	+	234601875	234602463	True	NM_001072,NM_001001394,NM_205862	chr2,chr2,chr2	+,-,+	UGT1A6,DNAJB3,UGT1A6	-421,50248,-1612
chrY:15815646-15815960	chrY	+	15815797	15816000	True	NM_182660,NM_004202	chrY,chrY	-,+	UTY,TMSB4Y	-223247,-401
chr1:220219604-220220343	chr1	+	220219695	220220212	True	NM_004446,NM_018060	chr1,chr1	-,+	EPRS,IARS2	-3,47242
chr19:37714655-37715577	chr19	+	37715269	37715439	True	NM_152279,NM_152604	chr19,chr19	-,+	ZNF585B,ZNF383	-13818,1926
chr9:132936480-132936770	chr9	+	132936575	132936809	True	NM_014286,NM_015033	chr9,chr9	+,-	NCS1,FNBP1	-1769,-131102
chr4:7937505-7938467	chr4	+	7937534	7938296	True	NM_001134647,NR_026892,NM_198595	chr4,chr4,chr4	-,+,-	AFAP1,AFAP1-AS1,AFAP1	3418,-181769,3418
chr22:32461121-32462976	chr22	+	32461444	32462955	True	NM_001010859,NR_033411	chr22,chr22	-,+	C22orf42,SLC5A1	92339,-6345
chr8:81450947-81452461	chr8	+	81450966	81452339	True	NM_001033723,NM_023929	chr8,chr8	-,+	ZNF704,ZBTB10	334735,-52576
chr8:11351632-11351898	chr8	+	11351682	11351796	True	NM_001715,NM_053279	chr8,chr8	+,-	BLK,FAM167A	-212,-27406
chrY:14775975-14776797	chrY	+	14776179	14776806	True	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	-1932,-242790
chr16:56554712-56555007	chr16	+	56554757	56554917	True	NM_031885,NM_032935	chr16,chr16	-,+	BBS2,MT4	-749,44043
chr19:17799503-17801210	chr19	+	17799659	17800917	True	NM_001080421,NM_018174	chr19,chr19	-,+	UNC13A,MAP1S	-651,29385
chr1:204817020-204817647	chr1	+	204817019	204817695	True	NM_201630,NM_015090	chr1,chr1	-,+	LRRN2,NFASC	-162422,-19289
chr20:61923846-61924070	chr20	+	61923857	61924117	True	NM_152864,NR_036220,NM_020882	chr20,chr20,chr20	-,+,+	NKAIN4,MIR4326,COL20A1	-37965,-5748,420
chr8:24347819-24349442	chr8	+	24348078	24349388	True	NM_003817,NM_006158	chr8,chr8	+,-	ADAM7,NEFL	-49621,464797
chr4:293717-293990	chr4	+	293819	293940	True	NM_001137608,NM_003441	chr4,chr4	-,+	ZNF732,ZNF141	-3875,37655
chr10:91457200-91458774	chr10	+	91457705	91458551	True	NR_026835,NM_016195	chr10,chr10	-,+	FLJ37201,KIF20B	-20,2815
chr6:116381663-116381964	chr6	+	116381723	116382010	True	NM_002031,NR_027338	chr6,chr6	-,+	FRK,TPI1P3	-13,-21888
chr18:44664465-44665549	chr18	+	44664674	44665422	True	NM_032124,NM_031303	chr18,chr18	-,+	HDHD2,KATNAL2	11499,-137946
chr6:36164830-36165602	chr6	+	36165078	36165651	True	NM_001010903,NM_015695	chr6,chr6	-,+	C6orf222,BRPF3	139061,-579
chr1:248018419-248019084	chr1	+	248018469	248019121	True	NM_015431,NM_001001959	chr1,chr1	+,-	TRIM58,OR11L1	1379,-13271
chr16:71609672-71610224	chr16	+	71609685	71610264	True	NM_000353,NM_001166395,NM_052858	chr16,chr16,chr16	-,+,+	TAT,CHST4,MARVELD3	784,-49583,49805
chr19:30432500-30433121	chr19	+	30432735	30433013	True	NM_134447,NM_003796,NM_031448	chr19,chr19,chr19	+,+,-	C19orf2,C19orf2,C19orf12	411,411,-226283
chr19:2705387-2706134	chr19	+	2705547	2705813	True	NM_003249,NM_052847	chr19,chr19	+,-	THOP1,GNG7	79692,-2801
chr4:6988521-6988761	chr4	+	6988543	6988733	True	NM_153376,NM_001113363	chr4,chr4	-,+	CCDC96,TBC1D14	56045,155
chr9:139100062-139100565	chr9	+	139100245	139100489	True	NM_015597,NM_014564,NM_178138	chr9,chr9,chr9	+,-,-	GPSM1,LHX3,LHX3	121442,-5241,-3290
chr12:6900766-6901789	chr12	+	6901090	6901680	True	NM_001195015,NM_001195014,NM_001195017,NM_001195016,NR_026581,NR_036545,NM_000616	chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,+,+,-,+,+	CD4,CD4,CD4,CD4,MLF2,CD4,CD4	-2449,-2449,-2449,-2449,-38454,-2449,-2503
chr11:1716213-1716743	chr11	+	1716412	1716780	True	NR_026642,NM_001012416	chr11,chr11	-,+	FAM99B,KRTAP5-6	-9553,1644
chr19:44417680-44418390	chr19	+	44417683	44418405	True	NM_003425,NM_013359	chr19,chr19	-,+	ZNF45,ZNF221	21056,36991
chr22:32871361-32871609	chr22	+	32871424	32871652	True	NM_174932,NM_012179,NM_001033024	chr22,chr22,chr22	-,+,+	BPIL2,FBXO7,FBXO7	-18051,-768,-251
chr17:9859772-9860329	chr17	+	9859777	9860239	True	NM_003644,NM_004246	chr17,chr17	-,+	GAS7,GLP2R	2577,-130447
chr5:131994183-131995820	chr5	+	131994372	131995852	True	NM_007054,NM_002188	chr5,chr5	-,+	KIF3A,IL13	77463,-558
chr11:67159460-67159740	chr11	+	67159509	67159773	True	NM_002708,NM_001008709,NM_004584,NM_206873	chr11,chr11,chr11,chr11	-,-,+,-	PPP1CA,PPP1CA,RAD9A,PPP1CA	9653,9653,-137,9653
chr10:91060598-91061632	chr10	+	91061019	91061664	True	NM_001547,NM_000235	chr10,chr10	+,-	IFIT2,LIPA	41,-49359
chr17:45286440-45287472	chr17	+	45286573	45287372	True	NM_002476,NM_001002841,NM_001256	chr17,chr17,chr17	+,+,-	MYL4,MYL4,CDC27	-74,-196,-19908
chr16:1525700-1525976	chr16	+	1525702	1525793	True	NM_001287,NM_001114331,NM_016111	chr16,chr16,chr16	-,-,+	CLCN7,CLCN7,TELO2	-617,-617,17558
chr17:28257690-28257892	chr17	+	28257761	28257931	True	NM_033389,NM_001145053	chr17,chr17	-,+	SSH2,EFCAB5	-743,-938
chr8:39360969-39362046	chr8	+	39361095	39361802	True	NM_001190956,NR_001569	chr8,chr8	+,-	ADAM18,ADAM3A	80284,18725
chr21:44589761-44590165	chr21	+	44589832	44590212	True	NM_006758,NM_000394	chr21,chr21	-,+	U2AF1,CRYAA	-62144,-742
chr3:185544642-185545710	chr3	+	185544669	185545431	True	NM_006548,NM_001007225,NR_027317	chr3,chr3,chr3	-,-,+	IGF2BP2,IGF2BP2,C3orf65	-1842,-1842,-113680
chr7:47828352-47830221	chr7	+	47828736	47830267	True	NM_025031,NM_138295	chr7,chr7	+,-	C7orf69,PKD1L1	4621,157860
chr7:34716760-34717924	chr7	+	34716763	34717762	True	NR_033664,NM_207173	chr7,chr7	-,+	AAA1,NPSR1	80183,-18917
chr14:77606931-77607172	chr14	+	77606931	77607095	True	NM_174976,NM_020431	chr14,chr14	-,+	ZDHHC22,TMEM63C	1089,41006
chr1:36944824-36945035	chr1	+	36944827	36944995	True	NM_000760,NM_024676,NM_172313,NM_156039	chr1,chr1,chr1,chr1	-,+,-,-	CSF3R,SH3D21,CSF3R,CSF3R	3970,-172170,3970,3970
chr17:72359426-72360149	chr17	+	72359642	72360116	True	NM_181790,NM_001080466	chr17,chr17	+,-	GPR142,BTBD17	3528,-1684
chr1:34320461-34321290	chr1	+	34320603	34321311	True	NR_033264,NM_145205,NM_052896	chr1,chr1,chr1	+,+,-	HMGB4,HMGB4,CSMD2	8368,4764,310182
chr7:142981803-142982012	chr7	+	142981865	142981937	True	NM_032983,NM_032982,NM_153345,NM_014690	chr7,chr7,chr7,chr7	+,+,+,-	CASP2,CASP2,TMEM139,FAM131B	3370,3370,125,77286
chr19:35523609-35524479	chr19	+	35523689	35524211	True	NM_182983,NM_001037,NM_199037,NM_002151,NM_175872	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	HPN,SCN1B,SCN1B,HPN,ZNF792	7198,-2148,-2148,7198,-68736
chr6:15001287-15001798	chr6	+	15001434	15001738	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	244788,661601
chr8:118166562-118167638	chr8	+	118166692	118167678	True	NM_173851,NM_006265	chr8,chr8	+,-	SLC30A8,RAD21	-19407,-279587
chr17:45011184-45012294	chr17	+	45011429	45012193	True	NM_203400,NM_054022	chr17,chr17	-,+	RPRML,GOSR2	44471,-10994
chr12:131717893-131718830	chr12	+	131718121	131718857	True	NR_026670,NM_194356	chr12,chr12	+,-	LOC116437,STX2	-68616,-394310
chr18:159349-160177	chr18	+	159391	159956	True	NM_005131,NM_005151,NM_001037334	chr18,chr18,chr18	-,+,+	THOC1,USP14,USP14	108162,-959,-959
chrX:148585193-148586647	chrX	+	148585783	148586621	True	NM_006123,NM_001166550,NM_000202,NM_001171907	chrX,chrX,chrX,chrX	-,-,-,+	IDS,IDS,IDS,CXorf40A	313,313,313,35897
chr19:11543774-11544127	chr19	+	11543951	11544081	True	NM_001001329,NM_145045,NM_002743	chr19,chr19,chr19	+,-,+	PRKCSH,CCDC151,PRKCSH	2187,1949,2187
chr11:67209284-67209646	chr11	+	67209432	67209674	True	NM_020441,NM_145200,NM_001018070,NM_005608	chr11,chr11,chr11,chr11	-,+,-,-	CORO1B,CABP4,CORO1B,PTPRCAP	1359,13143,1639,-4279
chr21:35879113-35880762	chr21	+	35879165	35880237	True	NM_000219,NM_058182	chr21,chr21	-,+	KCNE1,FAM165B	3434,-131467
chr15:90809184-90809388	chr15	+	90809268	90809426	True	NM_001033088,NR_028052,NM_006384	chr15,chr15,chr15	+,+,-	NGRN,NGRN,CIB1	-424,-424,-31989
chr6:139133119-139133864	chr6	+	139133219	139133673	True	NM_001195037,NM_001128617	chr6,chr6	+,-	ECT2L,REPS1	-16022,175779
chr1:78706857-78707333	chr1	+	78706874	78707326	True	NR_027310,NM_003902	chr1,chr1	+,-	MGC27382,FUBP1	-11648,-262097
chr2:237415190-237415941	chr2	+	237415329	237415930	True	NM_020311,NM_024726	chr2,chr2	+,-	CXCR7,IQCA1	62449,212
chr6:25845210-25846997	chr6	+	25845250	25846622	True	NM_005074,NM_005495	chr6,chr6	-,+	SLC17A1,SLC17A4	-12963,-90381
chr9:108019468-108021059	chr9	+	108019799	108020819	True	NM_080546,NM_005502	chr9,chr9	+,-	SLC44A1,ABCA1	-12921,-329272
chr19:39389252-39389854	chr19	+	39389564	39389858	True	NM_002503,NM_030593,NM_001001716,NM_012237,NR_034146,NM_001193286	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,-,-,-	NFKBIB,SIRT2,NFKBIB,SIRT2,SIRT2,SIRT2	756,694,756,655,-4769,694
chr5:175299682-175300009	chr5	+	175299768	175300058	True	NM_032361,NM_001008220	chr5,chr5	-,+	THOC3,CPLX2	95537,-1330
chr10:5042311-5043823	chr10	+	5042519	5043861	True	NM_001135241,NM_001353	chr10,chr10	-,+	AKR1C2,AKR1C1	2242,-37128
chr2:219222082-219222313	chr2	+	219222104	219222318	True	NM_198559,NM_022152	chr2,chr2	+,-	C2orf62,TMBIM1	-576,-64824
chr21:43810344-43810556	chr21	+	43810398	43810507	True	NM_024022,NM_032405,NM_001001895,NR_027348	chr21,chr21,chr21,chr21	-,-,+,-	TMPRSS3,TMPRSS3,UBASH3A,TMPRSS3	5746,5746,13511,-1145
chr13:99292054-99292921	chr13	+	99292326	99292759	True	NM_001032296,NR_036129	chr13,chr13	-,+	STK24,MIR3170	-62930,-431613
chr18:32205430-32205960	chr18	+	32205437	32206006	True	NM_001198940,NM_003787	chr18,chr18	+,-	DTNA,NOL4	-32207,-401922
chr16:67977458-67977990	chr16	+	67977464	67977896	True	NM_006742,NM_002801,NM_000229	chr16,chr16,chr16	+,-,-	PSKH1,PSMB10,LCAT	-50340,-6684,169
chr3:46716241-46716585	chr3	+	46716271	46716454	True	NM_182775,NM_147196	chr3,chr3	-,+	ALS2CL,TMIE	2496,26368
chr1:28909510-28910012	chr1	+	28909672	28909818	True	NR_024127,NR_002987,NR_003077,NM_152304,NR_002976,NM_001193532,NR_003035	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,+,-	SNHG12,SNORA61,SNORD99,RAB42,SNORA44,RAB42,SNORA16A	-1306,-3267,-4338,8893,-2648,9188,-2107
chr6:42533457-42534212	chr6	+	42533655	42534011	True	NM_015255,NM_001184801,NM_033502	chr6,chr6,chr6	+,+,-	UBR2,UBR2,TRERF1	-1953,-1953,-113872
chr14:39642987-39643770	chr14	+	39643212	39643578	True	NM_001079537,NM_177452,NM_002687	chr14,chr14,chr14	-,-,+	TRAPPC6B,TRAPPC6B,PNN	-3578,-3578,808
chr11:5711066-5712585	chr11	+	5711149	5712368	True	NM_006074,NM_001199573,NM_033092,NM_033034,NM_033093	chr11,chr11,chr11,chr11,chr11	+,+,-,-,-	TRIM22,TRIM22,TRIM5,TRIM5,TRIM5	-394,-394,-4810,-4810,-4810
chr15:62360960-62361334	chr15	+	62360959	62361251	True	NM_017684,NM_001018088,NM_018080,NM_020821,NM_207322	chr15,chr15,chr15,chr15,chr15	-,-,-,-,+	VPS13C,VPS13C,VPS13C,VPS13C,C2CD4A	-8295,-8295,-8295,-8295,-1834
chr7:100465212-100465553	chr7	+	100465212	100465316	True	NM_001015072,NM_003302,NM_001128853,NM_001128852,NM_015908,NM_001128854	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,+,+	UFSP1,TRIP6,SRRT,SRRT,SRRT,SRRT	22073,-313,7384,7384,7384,7384
chr15:35084774-35085545	chr15	+	35084780	35085425	True	NR_003144,NM_005159	chr15,chr15	+,-	LOC723972,ACTC1	444101,2553
chr17:29250441-29251692	chr17	+	29250561	29251725	True	NM_024683,NM_018404	chr17,chr17	-,+	C17orf42,ADAP2	-17275,-1858
chr19:13044580-13045671	chr19	+	13044602	13045306	True	NM_004461,NM_004343	chr19,chr19	-,+	FARSA,CALR	-44,4107
chr2:233469464-233469881	chr2	+	233469468	233469598	True	NM_145702,NR_027663	chr2,chr2	-,+	TIGD1,EFHD1	-54242,1168
chr9:133769872-133770340	chr9	+	133769952	133770360	True	NM_005157,NM_198180	chr9,chr9	+,-	ABL1,QRFP	-59172,-727
chr8:105464991-105465255	chr8	+	105465117	105465232	True	NM_001385,NM_030788	chr8,chr8	-,+	DPYS,TM7SF4	14096,-113122
chr20:56066032-56067031	chr20	+	56066620	56066862	True	NM_002591,NM_080618	chr20,chr20	+,-	PCK1,CTCFL	69274,33342
chrX:49117271-49118074	chrX	+	49117387	49118079	True	NM_001114377,NM_033215,NM_001184745,NM_014009	chrX,chrX,chrX,chrX	-,+,+,-	FOXP3,PPP1R3F,PPP1R3F,FOXP3	3259,8226,8226,3259
chr11:17373462-17373886	chr11	+	17373490	17373670	True	NM_000525,NM_001202439	chr11,chr11	-,+	KCNJ11,DKFZp686O24166	36586,-232
chr1:243418830-243419391	chr1	+	243418847	243419283	True	NM_006642,NM_001042405,NM_001042404,NM_014812	chr1,chr1,chr1,chr1	+,-,-,-	SDCCAG8,CEP170,CEP170,CEP170	23,-139,-139,-139
chr12:44199288-44199828	chr12	+	44199298	44199841	True	NM_002822,NM_032256	chr12,chr12	-,+	TWF1,TMEM117	387,30120
chr9:139333161-139333506	chr9	+	139333199	139333265	True	NM_019892,NM_015160	chr9,chr9	-,+	INPP5E,PMPCA	1041,-28134
chr20:37057802-37058118	chr20	+	37057923	37058063	True	NR_015366,NR_027241,NR_002911,NR_003239,NR_003017,NR_002910,NR_003018	chr20,chr20,chr20,chr20,chr20,chr20,chr20	-,-,-,+,-,-,-	LOC388796,LOC388796,SNORA71A,SNHG11,SNORA71C,SNORA71B,SNORA71D	5949,6005,-1837,17233,434,-3945,4629
chr9:80258314-80259465	chr9	+	80258444	80259357	True	NM_004297,NM_033305	chr9,chr9	-,+	GNA14,VPS13A	3930,-466140
chr19:14995208-14995498	chr19	+	14995485	14995547	True	NM_030901,NM_012377	chr19,chr19	-,+	OR7A17,OR7C2	-3318,56753
chr1:120835198-120835487	chr1	+	120835215	120835511	True	NM_001004340,NM_001100910	chr1,chr1	-,+	FCGR1B,FAM72B	100483,3493
chr1:120835198-120835487	chr1	-	143916606	143916902	False	NM_207418,NR_034178	chr1,chr1	-,+	FAM72D,SRGAP2P2	-3463,-909
chr1:120835198-120835487	chr1	+	206134697	206134993	False	NM_001123168,NM_001007544	chr1,chr1	+,-	FAM72A,C1orf186	3917,153704
chr16:57278093-57278898	chr16	+	57278309	57278811	True	NM_015993,NM_012106	chr16,chr16	-,+	PLLP,ARL2BP	39823,226
chr1:47571880-47572314	chr1	+	47572070	47572350	True	NM_005764,NM_001010969	chr1,chr1	-,+	PDZK1IP1,CYP4A22	83471,30756
chr6:44308730-44310229	chr6	+	44309233	44310137	True	NM_145026,NM_020745	chr6,chr6	+,-	SPATS1,AARS2	259,-28170
chr12:52845599-52845814	chr12	+	52845669	52845863	True	NM_002284,NM_005555	chr12,chr12	+,-	KRT86,KRT6B	-150071,97
chr12:52845599-52845814	chr12	+	52867330	52867522	False	NM_173086,NM_002284	chr12,chr12	-,+	KRT6C,KRT86	97,-171741
chr12:52845599-52845814	chr12	+	52886781	52886973	False	NM_002284,NM_005554	chr12,chr12	+,-	KRT86,KRT6A	-191192,258
chrX:85290956-85292211	chrX	+	85291353	85292114	True	NM_001139514,NM_000390	chrX,chrX	+,-	DACH2,CHM	111340,10508
chr8:145116641-145118033	chr8	+	145117188	145117970	True	NM_019037,NM_017570	chr8,chr8	+,-	EXOSC4,OPLAH	15551,-1604
chr16:20815910-20816669	chr16	+	20816025	20816445	True	NM_080663,NM_001142725,NM_030941,NM_001199053,NM_001144924	chr16,chr16,chr16,chr16,chr16	-,-,+,+,+	ERI2,ERI2,LOC81691,LOC81691,LOC81691	1408,1408,1321,1321,1321
chr12:51591023-51591723	chr12	+	51591068	51591598	True	NM_002702,NM_001136264	chr12,chr12	-,+	POU6F1,DAZAP2	402,40909
chr12:104851233-104851462	chr12	+	104851237	104851389	True	NM_006166,NM_001173982,NM_018413	chr12,chr12,chr12	-,+,+	NFYB,CHST11,CHST11	-319197,-596,-596
chr12:93808148-93810089	chr12	+	93808271	93810139	True	NM_003348,NR_002212	chr12,chr12	-,+	UBE2N,NUDT4P1	25942,-36576
chr19:55045260-55046615	chr19	+	55045304	55046626	True	NR_026716,NM_145057	chr19,chr19	+,-	KIR3DX1,CDC42EP5	-1446,-60882
chr12:105501964-105502570	chr12	+	105502003	105502627	True	NR_027752,NM_015275	chr12,chr12	-,+	ALDH1L2,KIAA1033	-23662,-562
chr1:93911883-93913445	chr1	+	93912156	93913268	True	NM_001024948,NR_034089,NM_017737,NM_001164473	chr1,chr1,chr1,chr1	+,-,+,+	FNBP1L,LOC100131564,FNBP1L,FNBP1L	419,-100788,419,419
chr7:75929650-75931257	chr7	+	75929664	75930829	True	NM_012479,NM_001540	chr7,chr7	-,+	YWHAG,HSPB1	57563,1045
chr7:150208412-150209711	chr7	+	150208419	150209668	True	NM_024711,NM_153236	chr7,chr7	-,+	GIMAP6,GIMAP7	120075,2276
chr2:133036133-133036379	chr2	+	133036134	133036350	True	NM_001508,NR_027020	chr2,chr2	+,-	GPR39,ANKRD30BL	137796,-20592
chr9:67927157-67927594	chr9	+	67927336	67927419	True	NR_027422,NM_001012419,NM_032250	chr9,chr9,chr9	-,+,+	FAM27B,ANKRD20A3,ANKRD20A1	-133147,-629,-629
chr9:67927157-67927594	chr9	+	69382576	69382639	False	NM_001085457,NM_001098805	chr9,chr9	-,+	CBWD6,ANKRD20A4	-119983,-651
chr9:67927157-67927594	chr9	+	42368898	42368961	False	NR_003670,NM_001012419,NM_001012421	chr9,chr9,chr9	-,+,+	KGFLP2,ANKRD20A3,ANKRD20A2	-349314,-651,-651
chr9:67927157-67927594	chr9	-	43132885	43132948	False	NM_001012419,NR_026558,NM_001012421	chr9,chr9,chr9	-,+,-	ANKRD20A3,AQP7P3,ANKRD20A2	651,-274789,651
chr5:159830854-159831254	chr5	+	159830853	159831108	True	NM_022090,NM_004219	chr5,chr5	-,+	C5orf54,PTTG1	-3793,17756
chr1:6842269-6842537	chr1	+	6842417	6842565	True	NM_001195563,NM_018198,NM_015215	chr1,chr1,chr1	+,-,+	CAMTA1,DNAJC11,CAMTA1	2818,-80451,2818
chr20:44652395-44652676	chr20	+	44652397	44652695	True	NM_001134771,NM_022095,NM_020708	chr20,chr20,chr20	+,-,+	SLC12A5,ZNF335,SLC12A5	-2119,-51564,5125
chr6:26126516-26126776	chr6	+	26126569	26126785	True	NM_003526,NM_003512	chr6,chr6	-,+	HIST1H2BC,HIST1H2AC	-2437,-2247
chr17:40990249-40990609	chr17	+	40990266	40990333	True	NM_176863,NM_001158,NM_009590,NM_005789,NM_003766	chr17,chr17,chr17,chr17,chr17	+,+,+,+,-	PSME3,AOC2,AOC2,PSME3,BECN1	-4894,6275,6275,-4894,-13956
chr1:116515752-116517045	chr1	+	116515846	116516873	True	NM_018420,NM_005599	chr1,chr1	+,-	SLC22A15,NHLH2	2245,-132099
chr9:33262577-33263577	chr9	+	33262736	33263620	True	NM_001172415,NM_001195536,NM_004323,NM_016410	chr9,chr9,chr9,chr9	-,+,-,+	BAG1,CHMP5,BAG1,CHMP5	1189,1256,1189,1256
chr1:23953651-23954616	chr1	+	23953679	23954459	True	NM_002167,NR_027042	chr1,chr1	-,+	ID3,MDS2	-67357,12
chr15:22546505-22547330	chr15	+	22546606	22547358	True	NR_027407,NR_033735	chr15,chr15	-,+	GOLGA8DP,REREP3	168420,-92
chr14:61448658-61449337	chr14	+	61448793	61449355	True	NM_001172702,NM_020810,NM_153811,NR_033344	chr14,chr14,chr14,chr14	+,-,+,+	SLC38A6,TRMT5,SLC38A6,SLC38A6	-1019,-1011,-1019,-886
chr12:108991023-108991550	chr12	+	108991246	108991474	True	NM_181724,NM_213595	chr12,chr12	-,+	TMEM119,ISCU	470,-35003
chr11:55371696-55373466	chr11	+	55371789	55373519	True	NM_001004700,NM_001004701,NM_001004124	chr11,chr11,chr11	-,+,+	OR4C11,OR4C16,OR4P4	60,-32243,32314
chr8:103254724-103256297	chr8	+	103254869	103256193	True	NM_015713,NM_001172477,NM_001172478,NM_024410	chr8,chr8,chr8,chr8	-,-,-,+	RRM2B,RRM2B,RRM2B,ODF1	-3523,-3810,-3523,307654
chr8:144352093-144352514	chr8	+	144352134	144352468	True	NM_052963,NM_138465	chr8,chr8	-,+	TOP1MT,GLI4	64632,-2578
chr22:45074081-45075390	chr22	+	45074497	45075267	True	NM_001198721,NM_001017530,NM_015366,NM_032287	chr22,chr22,chr22,chr22	+,+,+,-	PRR5,PRR5,PRR5,LDOC1L	-1860,-1860,-1860,-180492
chr5:140579962-140580502	chr5	+	140580085	140580533	True	NM_018932,NM_031947,NM_018930,NM_018931	chr5,chr5,chr5,chr5	+,-,+,+	PCDHB12,SLC25A2,PCDHB10,PCDHB11	7757,103131,-8185,-789
chr2:159264132-159265754	chr2	+	159264189	159264556	True	NM_001005476,NM_138803	chr2,chr2	+,-	PKP4,CCDC148	48919,48764
chr8:97778512-97780165	chr8	+	97778559	97779505	True	NM_016134,NM_015942	chr8,chr8	+,-	PGCP,MTERFD1	-121118,-504763
chr9:101705286-101706075	chr9	+	101705296	101705860	True	NM_173551,NM_001855	chr9,chr9	-,+	ANKS6,COL15A1	-146502,277
chr8:30585613-30585902	chr8	+	30585615	30585780	True	NM_001195103,NM_001195102,NM_000637,NM_005671,NM_001195104	chr8,chr8,chr8,chr8,chr8	-,-,-,+,-	GSR,GSR,GSR,UBXN8,GSR	-129,-129,-129,15909,-129
chr19:58893045-58893362	chr19	+	58893339	58893407	True	NM_138466,NM_001009,NM_001129730	chr19,chr19,chr19	-,+,-	ZNF837,RPS5,ZNF837	-950,5228,-950
chr15:90892924-90894018	chr15	+	90893220	90893917	True	NR_028287,NM_001004309	chr15,chr15	-,+	GABARAPL3,ZNF774	-541,1559
chr4:95127934-95128352	chr4	+	95128280	95128356	True	NM_001128429,NM_020159,NM_001128430,NM_014485	chr4,chr4,chr4,chr4	+,+,+,-	SMARCAD1,SMARCAD1,SMARCAD1,HPGDS	659,659,402,135721
chr2:167151773-167152172	chr2	+	167151880	167152221	True	NM_001079810,NM_002977	chr2,chr2	+,-	XIRP2,SCN9A	592775,80333
chr5:179109565-179110053	chr5	+	179109802	179110098	True	NM_001024649,NM_001164444	chr5,chr5	+,-	CANX,CBY3	15831,-1827
chr14:37692866-37693432	chr14	+	37693080	37693416	True	NM_138731,NM_030631	chr14,chr14	+,-	MIPOL1,SLC25A21	-26016,-51215
chr6:74079720-74080021	chr6	+	74079767	74079985	True	NM_001080507,NM_001017361	chr6,chr6	-,+	OOEP,C6orf221	-252,-7418
chr16:28252798-28253476	chr16	+	28253179	28253392	True	NM_015171,NM_001024401	chr16,chr16	-,+	XPO6,SBK1	-29989,50447
chr10:70480453-70480928	chr10	+	70480691	70480939	True	NM_018237,NM_152707	chr10,chr10	+,-	CCAR1,SLC25A16	31,-193411
chr2:38605672-38606984	chr2	+	38605772	38606919	True	NM_001135673,NR_027252,NR_024191,NM_022374	chr2,chr2,chr2,chr2	-,+,-,-	ATL2,C2orf58,ATL2,ATL2	-1340,-247582,-1340,-1340
chr9:71319278-71319725	chr9	+	71319331	71319657	True	NM_003558,NM_153237	chr9,chr9	+,-	PIP5K1B,C9orf71	958,-163548
chrX:138789227-138789633	chrX	+	138789301	138789609	True	NM_001099855,NM_000133,NM_001171876	chrX,chrX,chrX	-,+,-	MCF2,F9,MCF2	830,-176457,830
chr15:44039042-44039484	chr15	+	44039194	44039530	True	NR_002318,NM_005313	chr15,chr15	-,+	CATSPER2P1,PDIA3	-698,-664
chr17:41000212-41001164	chr17	+	41000212	41001154	True	NM_001158,NM_003734,NM_009590,NM_003766	chr17,chr17,chr17,chr17	+,+,+,-	AOC2,AOC3,AOC2,BECN1	-3656,2046,-3656,-23902
chr19:56189536-56189928	chr19	+	56189583	56189867	True	NM_001130072,NM_203374,NM_001130071,NM_013333	chr19,chr19,chr19,chr19	+,-,+,+	EPN1,ZNF784,EPN1,EPN1	-3073,-53642,-1643,-3073
chr16:67235711-67235916	chr16	+	67235716	67235872	True	NM_001950,NM_024712,NR_029887	chr16,chr16,chr16	+,+,-	E2F4,ELMO3,MIR328	-9699,-2739,476
chr12:120313646-120313903	chr12	+	120313800	120313902	True	NM_207311,NM_007174	chr12,chr12	+,-	CCDC64,CIT	113745,1240
chr10:124538575-124539581	chr10	+	124538574	124539374	True	NM_022034,NR_003570	chr10,chr10	-,+	CUZD1,FLJ46361	66371,-22418
chr17:16284644-16284958	chr17	+	16284701	16284939	True	NM_018955,NM_181716	chr17,chr17	+,-	UBB,CENPV	-385,-27889
chr15:99549418-99550501	chr15	+	99549481	99550490	True	NM_001102612,NM_001167902,NM_015286	chr15,chr15,chr15	-,-,+	PGPEP1L,PGPEP1L,SYNM	-596,584,94795
chr4:185941914-185942441	chr4	+	185941938	185942458	True	NM_001029887,NR_037510	chr4,chr4	+,-	HELT,MIR3945	-1906,-169674
chr14:21151920-21152221	chr14	+	21151928	21152188	True	NM_001097577,NM_002937,NM_001145,NM_194431,NM_001001968	chr14,chr14,chr14,chr14,chr14	+,+,+,+,-	ANG,RNASE4,ANG,RNASE4,OR6S1	4743,183,147,4743,-42078
chr5:150017045-150017483	chr5	+	150017051	150017531	True	NM_018047,NM_007286,NM_001109974	chr5,chr5,chr5	-,+,+	RBM22,SYNPO,SYNPO	63188,2675,2675
chr17:16692405-16693951	chr17	+	16692463	16693629	True	NR_026810,NR_029392,NR_003190	chr17,chr17,chr17	+,-,+	FAM106C,KRT16P2,LOC162632	-462,42571,-2313
chr17:16692405-16693951	chr17	-	18429582	18429868	False	NR_026809,NR_003554,NM_001040078	chr17,chr17,chr17	-,-,+	FAM106A,LOC220594,LGALS9C	347,-5016,-49534
chr17:16692405-16693951	chr17	+	20321011	20322177	False	NR_023380,NM_001042685	chr17,chr17	+,-	CCDC144C,LGALS9B	-96580,48724
chr19:1481943-1482340	chr19	+	1482103	1482271	True	NM_138393,NM_152482,NM_017573	chr19,chr19,chr19	+,-,-	REEP6,C19orf25,PCSK4	8893,-2875,8186
chr17:3600388-3600639	chr17	+	3600480	3600606	True	NM_031965,NM_002561,NM_175080,NR_037928,NM_001204520,NM_001204519	chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,-,-,-	GSG2,P2RX5,P2RX5,P2RX5-TAX1BP3,P2RX5,P2RX5	26590,-782,-782,-782,-782,-782
chr3:137482007-137482265	chr3	+	137482082	137482248	True	NM_001170538,NM_004189	chr3,chr3	-,+	DZIP1L,SOX14	350124,885
chr5:171880050-171880787	chr5	+	171880064	171880834	True	NM_001017995,NM_001142651	chr5,chr5	-,+	SH3PXD2B,NEURL1B	743,187441
chr17:72743189-72744033	chr17	+	72743212	72744032	True	NM_004252,NM_015654,NR_037409,NM_001006638,NM_001163990	chr17,chr17,chr17,chr17,chr17	+,-,+,+,+	SLC9A3R1,NAT9,MIR3615,RAB37,RAB37	730,28488,719,-9907,-9907
chr1:17337594-17337947	chr1	+	17337595	17337973	True	NM_014675,NM_001141974,NM_001141973,NM_022089	chr1,chr1,chr1,chr1	+,-,-,-	CROCC,ATP13A2,ATP13A2,ATP13A2	-89201,500,500,500
chr7:130126186-130126413	chr7	+	130126185	130126247	True	NR_029899,NR_004382,NM_177525,NM_177524,NM_002402	chr7,chr7,chr7,chr7,chr7	+,-,+,+,+	MIR335,MESTIT1,MEST,MEST,MEST	9704,4816,4925,-190,5690
chr19:57757001-57757865	chr19	+	57757267	57757798	True	NM_001023563,NM_001012729,NM_001145078	chr19,chr19,chr19	+,-,+	ZNF805,DUXA,ZNF805	-5269,-78411,-5269
chr4:129213667-129215602	chr4	+	129213680	129215641	True	NM_006320,NM_018078	chr4,chr4	-,+	PGRMC2,LARP1B	-3696,-231229
chr10:81967040-81967381	chr10	+	81967127	81967267	True	NM_145869,NM_145868,NM_001012973,NM_001157	chr10,chr10,chr10,chr10	-,-,+,-	ANXA11,ANXA11,PLAC9,ANXA11	-1799,-1799,-74920,-1799
chr6:74360153-74360904	chr6	+	74360436	74360786	True	NM_001159587,NM_012434	chr6,chr6	+,-	CD109,SLC17A5	44721,3009
chr3:13921955-13922298	chr3	+	13922025	13922325	True	NM_004625,NR_036481	chr3,chr3	-,+	WNT7A,LOC100132526	-407,52227
chr13:48556042-48557715	chr13	+	48556882	48557527	True	NM_003850,NM_018283	chr13,chr13	-,+	SUCLA2,NUDT15	17996,54175
chr14:94939269-94939747	chr14	+	94939383	94939561	True	NM_006215,NM_001042518,NM_175739	chr14,chr14,chr14	+,-,-	SERPINA4,SERPINA9,SERPINA9	88221,3159,3159
chr11:34070754-34071097	chr11	+	34070755	34070991	True	NM_203364,NM_005574,NM_005898	chr11,chr11,chr11	+,-,+	CAPRIN1,LMO2,CAPRIN1	2238,-156919,2238
chr2:242449767-242450048	chr2	+	242449771	242449843	True	NM_032515,NM_006374	chr2,chr2	+,-	BOK,STK25	48348,-1737
chr20:22560050-22561826	chr20	+	22560075	22561629	True	NM_021784,NM_153675,NR_001558,NM_001052	chr20,chr20,chr20,chr20	-,-,-,+	FOXA2,FOXA2,NCRNA00261,SSTR4	3522,4522,-795,454427
chr20:45031860-45032442	chr20	+	45031859	45032423	True	NM_152854,NM_133171,NM_182764	chr20,chr20,chr20	+,-,-	CD40,ELMO2,ELMO2	-285009,2898,2898
chr18:904250-904521	chr18	+	904287	904523	True	NM_001117,NM_001099733,NM_005433	chr18,chr18,chr18	+,+,-	ADCYAP1,ADCYAP1,YES1	773,420,-91960
chr5:90651101-90652061	chr5	+	90651312	90651696	True	NM_020801,NR_027435	chr5,chr5	-,+	ARRDC3,LOC100129716	27503,24467
chr22:45606204-45607054	chr22	+	45606431	45607031	True	NM_015264,NR_031651,NM_153645	chr22,chr22,chr22	-,-,+	KIAA0930,MIR1249,NUP50	1366,-9531,-45930
chr2:91961426-91961641	chr22	+	25004506	25004556	True	NM_005265,NM_207644,NM_001032365,NM_001032364	chr22,chr22,chr22,chr22	+,-,+,+	GGT1,C22orf36,GGT1,GGT1	-5377,-15471,-931,-5433
chr1:68150175-68150398	chr1	+	68150179	68150399	True	NM_018841,NM_001924,NM_001199741,NM_001199742	chr1,chr1,chr1,chr1	-,+,+,+	GNG12,GADD45A,GADD45A,GADD45A	148813,460,460,460
chr2:238538751-238539053	chr2	+	238538754	238539028	True	NM_001137550,NR_033308	chr2,chr2	+,-	LRRFIP1,RAB17	-2581,-38985
chrX:86957629-86958879	chrX	+	86957747	86958184	True	NM_019117,NM_001145414	chrX,chrX	+,-	KLHL4,CHM	-185083,-1655181
chr1:26561337-26562356	chr1	+	26561601	26562061	True	NM_022778,NM_001077262	chr1,chr1	+,-	CCDC21,UBXN11	-967,71196
chrX:119763053-119763967	chrX	+	119763221	119763910	True	NM_152692,NM_001137554,NM_001011551	chrX,chrX,chrX	-,+,-	C1GALT1C1,MCTS1,C1GALT1C1	145,-24727,145
chr22:37915783-37916100	chr22	+	37916003	37916149	True	NM_014550,NM_152243	chr22,chr22	-,+	CARD10,CDC42EP1	-793,40321
chr1:1980710-1981386	chr1	+	1980883	1981323	True	NM_002744,NM_001080484	chr1,chr1	+,-	PRKCZ,KIAA1751	585,-45607
chr13:45011048-45011329	chr13	+	45011214	45011290	True	NM_001010897,NM_006022	chr13,chr13	+,-	SERP2,TSC22D1	-63287,-235
chr14:24811891-24813764	chr14	+	24812678	24813584	True	NM_001136022,NM_139247,NM_006871,NM_001198568,NM_001198592	chr14,chr14,chr14,chr14,chr14	+,-,-,-,-	NFATC4,ADCY4,RIPK3,ADCY4,ADCY4	22560,-8401,-3436,-8401,-8401
chr14:98637121-98637746	chr14	+	98637222	98637686	True	NR_015430,NM_182560	chr14,chr14	-,+	C14orf64,C14orf177	-192761,540263
chr8:119964634-119966224	chr8	+	119964776	119966271	True	NM_002546,NM_006438	chr8,chr8	-,+	TNFRSF11B,COLEC10	-393,113152
chr20:18471572-18472460	chr20	+	18471676	18472467	True	NM_006606,NM_006363	chr20,chr20	-,+	RBBP9,SEC23B	5470,15720
chr19:45505769-45506449	chr19	+	45506007	45506455	True	NM_145288,NM_006509	chr19,chr19	-,+	ZNF296,RELB	73283,-1351
chr5:71404128-71404344	chr5	+	71404142	71404390	True	NM_005909,NM_015084	chr5,chr5	+,-	MAP1B,MRPS27	-1075,211744
chr20:23806695-23806899	chr20	+	23806700	23806948	True	NM_001322,NR_001279	chr20,chr20	-,+	CST2,CSTT	414,-306968
chr17:79517559-79517872	chr17	+	79517574	79517868	True	NR_033338,NM_012418,NM_025161	chr17,chr17,chr17	-,+,-	C17orf70,FSCN2,C17orf70	1611,-22208,1611
chr3:53163763-53164143	chr3	+	53163763	53164119	True	NM_006254,NM_052859	chr3,chr3	+,-	PRKCD,RFT1	31103,403
chr4:159705935-159707321	chr4	+	159706087	159707337	True	NM_005038,NM_020840	chr4,chr4	-,+	PPID,FNIP2	-61535,-15967
chr1:36024437-36026034	chr1	+	36024704	36026003	True	NM_014284,NM_001014839,NM_001014841,NM_024874	chr1,chr1,chr1,chr1	+,+,+,-	NCDN,NCDN,NCDN,KIAA0319L	-1362,-1362,-1362,-1667
chr9:133455482-133456510	chr9	+	133455503	133456527	True	NR_027440,NM_003934	chr9,chr9	-,+	LOC100272217,FUBP3	-622,-594
chr19:10122240-10122576	chr19	+	10122240	10122624	True	NM_015719,NM_015725	chr19,chr19	-,+	COL5A3,RDH8	-1093,1300
chr12:96337321-96338766	chr12	+	96337376	96338106	True	NM_152435,NM_182496	chr12,chr12	+,-	AMDHD1,CCDC38	-356,-948
chr10:70321472-70321745	chr10	+	70321519	70321793	True	NM_030625,NM_152707	chr10,chr10	+,-	TET1,SLC25A16	-1453,-34239
chr12:22797197-22797823	chr12	+	22797233	22797828	True	NM_014802,NM_018638	chr12,chr12	-,+	KIAA0528,ETNK1	-99781,-19216
chr1:227133867-227134107	chr1	+	227133906	227133996	True	NM_020247,NM_002221	chr1,chr1	+,-	ADCK3,ITPKB	-6019,-207030
chr14:55882881-55883116	chr14	+	55882880	55883158	True	NM_014924,NM_152231	chr14,chr14	-,+	ATG14,FBXO34	-4304,-144059
chr15:21004268-21004556	chr15	+	21004294	21004604	True	NR_027992,NR_027411	chr15,chr15	-,+	BCL8,GOLGA8C	-42814,-236671
chr15:21004268-21004556	chr15	+	22010977	22011287	False	NR_015416,NR_024387	chr15,chr15	+,-	LOC727924,CXADRP2	266744,5641
chr16:67701793-67702218	chr16	+	67701964	67702176	True	NM_016948,NM_001082487,NM_001082486,NM_022914,NM_001012984,NM_032140,NM_001037281	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,-,+,-,+	PARD6A,ACD,ACD,ACD,C16orf86,C16orf48,PARD6A	-7164,-7246,-7246,-7246,-1298,-1336,-7164
chr3:180040724-180041519	chr3	+	180040853	180041534	True	NM_001042601,NM_016559	chr3,chr3	+,-	TTC14,PEX5L	278383,-286336
chr2:27483098-27484853	chr2	+	27483233	27484893	True	NM_173650,NM_003459	chr2,chr2	+,-	DNAJC5G,SLC30A3	13395,1117
chr21:45197258-45198602	chr21	+	45197897	45198589	True	NM_000100,NM_003683	chr21,chr21	-,+	CSTB,RRP1	-1638,10828
chr18:12885182-12885618	chr18	+	12885312	12885648	True	NM_001013437,NM_080423,NM_080422,NM_002828	chr18,chr18,chr18,chr18	+,-,-,-	SEH1L,PTPN2,PTPN2,PTPN2	62334,-978,-978,-978
chr16:27146610-27147561	chr16	+	27146610	27147274	True	NM_024773,NM_145080	chr16,chr16	+,-	JMJD5,NSMCE1	67532,132889
chr17:7531165-7531703	chr17	+	7531272	7531540	True	NM_001040,NM_133491,NM_001146279,NM_001146280,NM_001146281,NR_027462	chr17,chr17,chr17,chr17,chr17,chr17	+,-,+,+,+,+	SHBG,SAT2,SHBG,SHBG,SHBG,SHBG	1912,-78,1912,1912,1912,-36
chrX:99983879-99984573	chrX	+	99984042	99984598	True	NM_080737,NM_014467,NM_001129896,NM_001174068	chrX,chrX,chrX,chrX	-,+,-,-	SYTL4,SRPX2,SYTL4,SYTL4	1974,-84930,2587,1974
chr10:97194707-97194963	chr10	+	97194711	97194939	True	NM_006434,NM_207321,NM_001034956,NM_001034957,NM_001034954,NM_001034955	chr10,chr10,chr10,chr10,chr10,chr10	-,+,-,-,-,-	SORBS1,C10orf129,SORBS1,SORBS1,SORBS1,SORBS1	6048,-240805,6048,6048,6048,6048
chr11:2231331-2231594	chr11	+	2231443	2231575	True	NM_199293,NR_028044	chr11,chr11	-,+	TH,IGF2AS	-38408,-69736
chr1:48390479-48392031	chr1	+	48390539	48392028	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	70584,296328
chr3:88368508-88369461	chr3	+	88368516	88369144	True	NM_173824,NM_001195308	chr3,chr3	+,-	C3orf38,CGGBP1	-169674,-169500
chr10:44285791-44286072	chr10	+	44285833	44286111	True	NR_033923,NR_002726	chr10,chr10	+,-	C10orf136,HNRNPA3P1	54642,6
chr6:27776777-27777737	chr6	+	27776777	27777767	True	NM_003536,NM_003509,NM_003521,NM_003519,NM_021066	chr6,chr6,chr6,chr6,chr6	+,+,+,-,-	HIST1H3H,HIST1H2AI,HIST1H2BM,HIST1H2BL,HIST1H2AJ	74,-851,5054,-1068,4801
chr19:17417129-17417823	chr19	+	17417138	17417590	True	NM_024050,NM_024527,NM_023937	chr19,chr19,chr19	+,-,+	DDA1,ABHD8,MRPL34	2746,-2856,-712
chr15:90233285-90233491	chr15	+	90233370	90233508	True	NM_003847,NM_020212	chr15,chr15	-,+	PEX11A,WDR93	500,519
chr17:80373081-80373591	chr17	+	80373204	80373612	True	NM_173620,NM_175902,NR_033265,NM_024648	chr17,chr17,chr17,chr17	+,-,-,-	HEXDC,C17orf101,C17orf101,C17orf101	2639,2951,2951,2951
chr6:84743819-84744047	chr6	+	84743820	84744096	True	NM_014895,NM_138409	chr6,chr6	-,+	KIAA1009,MRAP2	193289,-451
chr2:47918124-47919913	chr2	+	47918389	47919482	True	NM_022055,NM_000179	chr2,chr2	-,+	KCNK12,MSH6	-120919,90738
chr15:69371326-69372521	chr15	+	69371590	69372203	True	NR_026949,NM_006305	chr15,chr15	+,-	NCRNA00277,ANP32A	986,-258329
chr12:52462629-52463347	chr12	+	52462801	52463359	True	NM_001098673,NM_021934,NM_001081492	chr12,chr12,chr12	+,+,-	C12orf44,C12orf44,KRT80	398,398,122475
chr7:2372307-2373430	chr7	+	2372574	2373472	True	NM_001037283,NM_013321	chr7,chr7	+,-	EIF3B,SNX8	21001,-18475
chr13:109927994-109928816	chr13	+	109928047	109928741	True	NM_003749,NM_001198950	chr13,chr13	-,+	IRS2,MYO16	510225,-646528
chr2:74727035-74727392	chr2	+	74727092	74727310	True	NR_024606,NM_001009812,NM_032673	chr2,chr2,chr2	+,-,-	LOC151534,LBX2,PCGF1	2433,3183,7561
chr4:99915644-99916538	chr4	+	99915925	99916501	True	NR_037455,NM_015143,NM_001968	chr4,chr4,chr4	+,+,-	MIR3684,METAP1,EIF4E	2036,286,-64139
chr6:27731470-27732511	chr6	+	27731870	27732394	True	NM_003509,NM_003519	chr6,chr6	+,-	HIST1H2AI,HIST1H2BL	43582,43365
chr17:30190763-30191151	chr17	+	30190763	30191135	True	NM_018405,NM_015355	chr17,chr17	-,+	C17orf79,SUZ12	-4437,72908
chr15:36930602-36931554	chr15	+	36930709	36931353	True	NR_027320,NM_032499	chr15,chr15	-,+	CSNK1A1P1,C15orf41	179410,1452
chr10:122217468-122219280	chr10	+	122217526	122219111	True	NM_001030059,NR_033850	chr10,chr10	+,-	PPAPDC1A,LOC283089	-1111,391630
chr1:6417738-6418017	chr1	+	6417784	6417938	True	NM_031475,NM_181865,NM_181866	chr1,chr1,chr1	+,-,-	ESPN,ACOT7,ACOT7	66909,2876,1116
chr17:66505900-66506650	chr17	+	66505954	66506652	True	NR_027751,NM_212472,NM_212471,NM_002734	chr17,chr17,chr17,chr17	-,+,+,+	FAM20A,PRKAR1A,PRKAR1A,PRKAR1A	47966,1890,1457,1890
chr18:12408812-12409324	chr18	+	12408813	12408982	True	NM_006796,NM_001142405,NM_006553	chr18,chr18,chr18	-,+,+	AFG3L2,SLMO1,SLMO1	-31538,-969,-969
chr19:6458218-6459014	chr19	+	6458234	6458993	True	NM_139161,NM_174881,NM_024103	chr19,chr19,chr19	+,+,-	CRB3,CRB3,SLC25A23	5266,5266,838
chr4:47464158-47465260	chr4	+	47464233	47465171	True	NM_020453,NM_017845	chr4,chr4	+,-	ATP10D,COMMD8	22238,556
chr3:135099132-135100112	chr3	+	135099138	135100150	True	NM_001190447,NM_178554,NM_004441	chr3,chr3,chr3	+,-,+	PPP2R3A,KY,EPHB1	584364,-729274,-585090
chr17:37826030-37826542	chr17	+	37826039	37826575	True	NM_002686,NM_003673,NM_033419	chr17,chr17,chr17	+,+,-	PNMT,TCAP,PGAP3	-1583,-4491,17785
chr4:78484356-78485256	chr4	+	78484421	78485093	True	NM_144571,NM_006419	chr4,chr4	-,+	CNOT6L,CXCL13	255509,-51565
chr3:10883313-10883814	chr3	+	10883317	10883797	True	NR_027102,NM_014229	chr3,chr3	-,+	LOC285370,SLC6A11	-77440,-25451
chr12:123215149-123215522	chr12	+	123215222	123215568	True	NM_032554,NM_003677	chr12,chr12	-,+	GPR81,DENR	-93,21802
chr15:40655435-40655993	chr15	+	40655531	40655845	True	NM_207380,NM_033510	chr15,chr15	-,+	C15orf52,DISP2	-22363,-5148
chr21:44075464-44076066	chr21	+	44075551	44076095	True	NM_001001585,NM_001001584,NM_001001574,NM_080860,NM_002606,NM_001001578,NM_001001579,NM_001001569,NM_001001568,NM_001001581,NM_001001580,NM_001001583,NM_001001582,NM_001001570,NM_001001571,NM_001001572,NM_001001573,NM_001001567,NM_001001575,NM_001001576,NM_001001577	chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21	+,+,+,-,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+	PDE9A,PDE9A,PDE9A,RSPH1,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A	-1740,-1740,-1740,-159150,-1740,-1740,-1740,-1740,-1740,-1740,-1740,-1740,-1740,-1740,-1740,-1740,-1740,-1740,-1740,-1740,-1740
chr8:145151029-145151542	chr8	+	145151036	145151538	True	NM_001916,NM_030974,NM_032272	chr8,chr8,chr8	+,-,+	CYC1,SHARPIN,MAF1	-1127,7652,7766
chr11:67250372-67250573	chr11	+	67250458	67250616	True	NM_003977,NM_025124	chr11,chr11	+,-	AIP,TMEM134	-4,-13727
chr4:77319742-77321543	chr4	+	77319922	77321096	True	NM_001042784,NM_020859	chr4,chr4	-,+	CCDC158,SHROOM3	7412,35156
chr12:7244543-7245110	chr12	+	7244566	7245150	True	NR_026947,NM_001733	chr12,chr12	+,-	LOC283314,C1R	15753,-57
chr4:25549507-25550017	chr4	+	25549707	25549814	True	NM_015187,NM_001177998	chr4,chr4	-,+	SEL1L3,SLC34A2	314851,107620
chr1:43272575-43274526	chr1	+	43272660	43274000	True	NM_199342,NM_001017922	chr1,chr1	-,+	CCDC23,ERMAP	9109,8775
chr4:24951497-24952768	chr4	+	24951573	24952745	True	NM_003102,NM_173463	chr4,chr4	+,-	SOD3,CCDC149	-154539,29131
chr9:137807432-137808178	chr9	+	137807442	137808009	True	NM_015837,NM_002003	chr9,chr9	+,-	FCN2,FCN1	-34835,1848
chrX:31478992-31480312	chrX	+	31479169	31480333	True	NM_203391,NM_004014	chrX,chrX	+,-	GK,DMD	-807754,46132
chr12:113340829-113341464	chr12	+	113340986	113341458	True	NM_001032409,NM_002534,NM_001193521,NM_016816	chr12,chr12,chr12,chr12	+,+,-,+	OAS1,OAS1,RASAL1,OAS1	3280,3280,232159,3280
chr2:174830746-174830975	chr2	+	174830798	174831014	True	NM_003111,NM_001145250,NM_001017371,NM_001172712	chr2,chr2,chr2,chr2	-,+,-,-	SP3,SP9,SP3,SP3	-368,368806,-1851,-368
chr6:52669780-52671500	chr6	+	52670069	52671538	True	NM_145740,NM_014051	chr6,chr6	-,+	GSTA1,TMEM14A	-1405,-134248
chr6:52669780-52671500	chr6	+	52630485	52630538	False	NM_014051,NM_000846	chr6,chr6	+,-	TMEM14A,GSTA2	-94655,-2124
chr15:68572858-68573995	chr15	+	68572883	68573910	True	NM_017882,NM_015322	chr15,chr15	-,+	CLN6,FEM1B	-50803,-2795
chr11:126075228-126075444	chr11	+	126075234	126075470	True	NM_001144827,NM_032795,NM_024556	chr11,chr11,chr11	-,-,+	RPUSD4,RPUSD4,FAM118B	6167,6167,6148
chr1:44873518-44873740	chr1	+	44873637	44873769	True	NM_018150,NM_024066	chr1,chr1	+,-	RNF220,ERI3	-2728,-52698
chr3:2138820-2139975	chr3	+	2138877	2139789	True	NM_175607,NM_000564	chr3,chr3	+,-	CNTN4,IL5RA	760,1012319
chr3:47945567-47946077	chr3	+	47945566	47946103	True	NR_031595,NM_003074	chr3,chr3	+,-	MIR1226,SMARCC1	-54581,-122161
chr11:119249823-119250783	chr11	+	119249822	119250599	True	NM_004205,NR_034160	chr11,chr11	-,+	USP2,LOC100499227	1888,1888
chr7:69063223-69063465	chr7	+	69063272	69063332	True	NM_001127231,NM_001127232,NM_015570,NR_037477	chr7,chr7,chr7,chr7	+,+,+,-	AUTS2,AUTS2,AUTS2,MIR3914-1	572,573,573,1709474
chr7:106812227-106813479	chr7	+	106812413	106813514	True	NM_012257,NM_006348	chr7,chr7	+,-	HBP1,COG5	-3016,391496
chr14:73392917-73393175	chr14	+	73393032	73393174	True	NM_181340,NM_181341,NM_015604,NM_012074,NM_001163508,NM_001163509	chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,-,+,+	DCAF4,DCAF4,DCAF4,DPF3,DCAF4,DCAF4	-43,-43,-43,-32223,-43,-43
chr11:48003837-48004706	chr11	+	48003862	48004597	True	NM_002843,NM_015231,NM_001098503	chr11,chr11,chr11	+,-,+	PTPRJ,NUP160,PTPRJ	-1803,-133805,-1803
chr17:1928657-1928868	chr17	+	1928736	1928816	True	NM_178568,NM_001383	chr17,chr17	-,+	RTN4RL1,DPH1	-558,4614
chr11:15133750-15134931	chr11	+	15133767	15134957	True	NM_001042536,NM_001741,NM_001031853	chr11,chr11,chr11	+,-,+	INSC,CALCA,INSC	1526,-139935,50
chr2:7031037-7031614	chr2	+	7031403	7031627	True	NM_207315,NM_080657	chr2,chr2	-,+	CMPK2,RSAD2	-25467,-13671
chr2:224471399-224473165	chr2	+	224471698	224473058	True	NM_022915,NM_003469	chr2,chr2	+,-	MRPL44,SCG2	349062,-4481
chr1:247208858-247210190	chr1	+	247209257	247210207	True	NM_173858,NR_037894	chr1,chr1	+,-	VN1R5,ZNF670-ZNF695	209166,31958
chr9:117883946-117885590	chr9	+	117884006	117885597	True	NM_017418,NM_002160	chr9,chr9	+,-	DEC1,TNC	18499,-3520
chr1:76080922-76081185	chr1	+	76080939	76081227	True	NM_000016,NM_001130058,NM_152697	chr1,chr1,chr1	+,-,-	ACADM,SLC44A5,SLC44A5	108815,-4140,-4140
chr4:75859139-75859392	chr4	+	75859203	75859341	True	NM_001729,NM_015393	chr4,chr4	-,+	BTC,PARM1	-139321,-973
chr15:43621832-43622098	chr15	+	43621837	43622075	True	NM_001159280,NM_014793,NM_001012969	chr15,chr15,chr15	+,-,+	ADAL,LCMT2,ADAL	796,795,796
chr3:44751137-44751461	chr3	+	44751264	44751497	True	NM_020696,NM_033210,NM_001134442,NM_001134441,NM_001134440	chr3,chr3,chr3,chr3,chr3	-,+,+,+,+	KIAA1143,ZNF502,ZNF502,ZNF502,ZNF502	51731,2637,2637,2637,2637
chr17:31323134-31323429	chr17	+	31323146	31323232	True	NM_173847,NM_015194	chr17,chr17	+,-	SPACA3,MYO1D	-4315,-119244
chr19:3366925-3367276	chr19	+	3367160	3367230	True	NM_005597,NM_001136503,NM_205843	chr19,chr19,chr19	+,-,+	NFIC,C19orf77,NFIC	-638,113360,-7595
chr11:8058705-8059738	chr11	+	8058875	8059714	True	NM_003320,NM_176821	chr11,chr11	+,-	TUB,NLRP10	465,-73816
chr19:35220574-35221330	chr19	+	35220738	35221088	True	NM_001029997,NM_001007248,NM_001145665	chr19,chr19,chr19	+,-,+	ZNF181,ZNF599,ZNF181	4391,43096,4391
chr1:155053814-155054292	chr1	+	155053890	155054276	True	NM_144622,NM_004952	chr1,chr1	-,+	DCST2,EFNA3	-47633,-2593
chr8:95653601-95653897	chr8	+	95653633	95653883	True	NM_017697,NR_034034,NM_001122827,NM_001122825,NM_001034915,NM_001122826	chr8,chr8,chr8,chr8,chr8,chr8	+,-,+,+,+,+	ESRP1,LOC100288748,ESRP1,ESRP1,ESRP1,ESRP1	-320,-1938,-320,-320,-320,-320
chr19:57702915-57703190	chr19	+	57703003	57703167	True	NM_001012729,NM_003417	chr19,chr19	-,+	DUXA,ZNF264	-24147,-186
chr14:93797731-93797946	chr14	+	93797779	93797955	True	NM_020818,NM_018167,NM_001002860	chr14,chr14,chr14	+,-,-	KIAA1409,BTBD7,BTBD7	1609,1480,1480
chr3:33261875-33262207	chr3	+	33261882	33261959	True	NM_012157,NM_015551	chr3,chr3	+,-	FBXL2,SUSD5	56974,-1175
chr19:31640709-31641094	chr19	+	31640723	31641021	True	NM_020856,NR_026894	chr19,chr19	-,+	TSHZ3,DKFZp566F0947	199219,9
chr6:82462568-82462824	chr6	+	82462586	82462872	True	NM_006670,NM_017633	chr6,chr6	+,-	TPBG,FAM46A	610050,-158
chr5:140481265-140481847	chr5	+	140481277	140481571	True	NM_018936,NM_018937,NM_031947	chr5,chr5,chr5	+,+,-	PCDHB2,PCDHB3,SLC25A2	-7091,-1094,202091
chr12:10251572-10253213	chr12	+	10251750	10252945	True	NM_207345,NM_016511	chr12,chr12	+,-	CLEC9A,CLEC1A	-68528,-145
chr2:288700-288911	chr2	+	288769	288843	True	NR_024080,NM_001002919	chr2,chr2	+,-	ACP1,FAM150B	-23951,-461
chr5:111093583-111093861	chr5	+	111093622	111093812	True	NM_001142479,NM_001142478,NR_015370,NM_004772,NM_001142482,NM_001142483,NM_001142480,NM_001142481,NM_001142477,NM_001142476	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,-,+,-,-,-,-,-,-,-	C5orf13,C5orf13,NCRNA00219,C5orf13,C5orf13,C5orf13,C5orf13,C5orf13,C5orf13,C5orf13	-370,-223,402410,-677,-518,-1674,-370,-516,31,153
chr16:4613341-4613863	chr16	+	4613858	4613916	True	NM_001145011,NM_013399	chr16,chr16	+,-	LOC342346,C16orf5	-7425,-25042
chr17:16875371-16875594	chr17	+	16875370	16875642	True	NM_015134,NM_012452	chr17,chr17	+,-	MPRIP,TNFRSF13B	70464,8
chr11:60930186-60931108	chr11	+	60930221	60930879	True	NM_001079807,NM_017966	chr11,chr11	+,-	PGA3,VPS37C	40104,-1305
chr1:21766354-21766580	chr1	+	21766359	21766539	True	NM_032264,NM_001113348	chr1,chr1	+,-	NBPF3,ECE1	91,-94325
chr18:30092969-30093439	chr18	+	30092996	30093484	True	NR_003558,NM_022751	chr18,chr18	+,-	WBP11P1,FAM59A	-1421,-42549
chr11:63974858-63975065	chr11	+	63974862	63975114	True	NM_178443,NM_001160393,NM_031471	chr11,chr11,chr11	+,-,+	FERMT3,TRPT1,FERMT3	-761,18277,-761
chr12:110503323-110503911	chr12	+	110503327	110503889	True	NM_207435,NM_031473	chr12,chr12	-,+	C12orf76,IFT81	1661,58250
chr7:56124648-56125293	chr7	+	56124886	56125297	True	NM_001762,NM_001042470,NM_004577,NM_001042469,NM_001146333,NM_015411,NR_002957,NM_001130069,NM_001009186	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,+,-,+,+,+,+,+,+	CCT6A,SUMF2,PSPH,SUMF2,SUMF2,SUMF2,SNORA15,SUMF2,CCT6A	-5571,6619,-5618,6619,6619,6619,2865,6619,-5571
chr2:85133736-85134205	chr2	+	85133774	85134237	True	NM_021103,NM_001080824	chr2,chr2	+,-	TMSB10,C2orf89	-1062,-25522
chr8:26238876-26239131	chr8	+	26238908	26239174	True	NM_007257,NM_004331	chr8,chr8	-,+	PNMA2,BNIP3L	132359,1348
chr19:51013232-51013672	chr19	+	51013397	51013673	True	NM_138334,NM_001024656,NM_001114598,NM_206538	chr19,chr19,chr19,chr19	-,-,-,+	JOSD2,ASPDH,ASPDH,C19orf63	722,4324,3519,-33712
chr17:4890172-4890504	chr17	+	4890295	4890529	True	NM_006612,NM_001171168,NM_001171167,NM_001171166,NM_015099	chr17,chr17,chr17,chr17,chr17	+,-,-,-,-	KIF1C,CAMTA2,CAMTA2,CAMTA2,CAMTA2	10713,186,186,481,481
chr6:74101098-74102445	chr6	+	74101103	74101752	True	NM_001080507,NM_018665	chr6,chr6	-,+	OOEP,DDX43	-21588,2532
chr9:73736594-73737583	chr9	+	73736659	73737597	True	NM_182505,NM_001007471	chr9,chr9	+,-	C9orf85,TRPM3	788825,-145
chr7:102983537-102984576	chr7	+	102983849	102984565	True	NM_001204453,NM_001129887,NM_002803,NM_014377	chr7,chr7,chr7,chr7	+,-,+,-	PSMC2,DNAJC2,PSMC2,DNAJC2	3405,805,3405,805
chr19:2254190-2254456	chr19	+	2254282	2254368	True	NR_036207,NM_000479,NM_144616	chr19,chr19,chr19	+,+,-	MIR4321,AMH,JSRP1	-3695,-5220,2104
chr7:76260779-76261590	chr7	+	76260885	76261386	True	NR_029411,NM_152992,NM_012230	chr7,chr7,chr7	+,-,-	LOC100133091,POMZP3,POMZP3	-82285,-4265,-4265
chr7:76260779-76261590	chr7	+	75076308	75076809	False	NM_001099415,NR_033322	chr7,chr7	-,+	POM121C,NSUN5P1	38816,-36742
chr19:46662622-46663902	chr19	+	46662646	46663863	True	NM_001135113,NM_207393	chr19,chr19	+,-	IGFL2,IGFL3	-11197,-34715
chr3:109040344-109041351	chr3	+	109040373	109041115	True	NM_138815,NM_001145553	chr3,chr3	-,+	DPPA2,FLJ25363	-5009,87721
chr6:116990116-116990344	chr6	+	116990247	116990389	True	NM_145062,NM_002269	chr6,chr6	-,+	ZUFSP,KPNA5	-274,11977
chr19:52032726-52033084	chr19	+	52032740	52033084	True	NM_001177547,NM_198845,NM_198846,NM_001177549,NM_001177548,NM_007147,NM_001245	chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,+,-	SIGLEC6,SIGLEC6,SIGLEC6,SIGLEC6,SIGLEC6,ZNF175,SIGLEC6	2076,2076,2076,2076,2076,41446,2076
chr14:21424380-21424686	chr14	+	21424395	21424730	True	NM_002934,NM_201538	chr14,chr14	+,-	RNASE2,NDRG2	-816,68585
chr15:34627594-34628638	chr15	+	34627605	34628625	True	NM_133647,NM_001042496,NM_001042497,NM_001042494,NM_001042495,NM_018648,NM_175741	chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,-,-,-,-,+	SLC12A6,SLC12A6,SLC12A6,SLC12A6,SLC12A6,NOP10,C15orf55	470,1386,470,1386,1690,6787,9440
chr19:7506968-7508033	chr19	+	7507471	7507701	True	NR_024491,NM_001130955	chr19,chr19	-,+	LOC100128573,ARHGEF18	30596,-2950
chr5:141028824-141029473	chr5	+	141028856	141029268	True	NM_033449,NM_173828	chr5,chr5	-,+	FCHSD1,RELL2	1768,-12390
chr2:55508833-55509290	chr2	+	55508845	55509331	True	NR_027258,NM_002453	chr2,chr2	+,-	PRORSD1P,MTIF2	123,-12461
chr1:167897508-167898316	chr1	+	167897723	167898279	True	NM_001198957,NM_001198956,NM_001143674,NR_026550,NM_018442,NM_001017977,NM_015415	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,-,+,+,-	DCAF6,DCAF6,BRP44,BRP44,DCAF6,DCAF6,BRP44	7517,7517,8088,7220,7517,7517,8088
chr16:85334674-85335107	chr16	+	85334791	85335125	True	NR_033984,NM_198491	chr16,chr16	+,-	LOC400548,FAM92B	-164086,-188677
chr3:16318185-16318522	chr3	+	16318193	16318409	True	NM_206831,NM_138381	chr3,chr3	-,+	DPH3,OXNAD1	-11697,-11581
chr6:74230244-74230870	chr6	+	74230357	74230793	True	NM_001402,NM_133645	chr6,chr6	-,+	EEF1A1,MTO1	12,-58955
chr20:30949295-30949588	chr20	+	30949456	30949583	True	NM_080616,NM_015338,NM_001164603	chr20,chr20,chr20	-,+,+	C20orf112,ASXL1,ASXL1	121756,-3368,-3368
chr2:191883007-191883481	chr2	+	191883008	191883458	True	NM_139266,NM_014905,NM_007315	chr2,chr2,chr2	-,+,-	STAT1,GLS,STAT1	-4032,-137521,-4032
chr9:88901371-88903313	chr9	+	88901382	88903156	True	NM_024635,NM_030940	chr9,chr9	+,-	NAA35,ISCA1	-345376,-3892
chr12:120107231-120107472	chr12	+	120107436	120107496	True	NR_031589,NM_006253	chr12,chr12	-,+	MIR1178,PRKAB1	44083,-1726
chr5:131121170-131121417	chr5	+	131121267	131121353	True	NM_001008738,NM_000588	chr5,chr5	-,+	FNIP1,IL3	11453,274993
chr22:26573672-26574229	chr22	+	26573719	26574173	True	NM_021115,NM_001184773,NM_001184776,NM_001184777,NM_001184774,NM_001184775,NM_152841	chr22,chr22,chr22,chr22,chr22,chr22,chr22	+,+,+,+,+,+,-	SEZ6L,SEZ6L,SEZ6L,SEZ6L,SEZ6L,SEZ6L,HPS4	-8332,-8332,-8332,-8332,-8332,-8332,301428
chr1:248059034-248059250	chr1	+	248059124	248059192	True	NM_001001959,NM_001001957	chr1,chr1	-,+	OR11L1,OR2W3	-53926,-286
chr1:154474871-154475123	chr1	+	154474870	154475138	True	NM_182499,NM_001010846,NM_001098475	chr1,chr1,chr1	+,-,+	TDRD10,SHE,TDRD10	-226,-344,-226
chr1:202138040-202138518	chr1	+	202138119	202138395	True	NR_002930,NR_037663,NR_037664,NM_001199797,NM_080588,NM_002832	chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,-,-,-	PTPRVP,PTPN7,PTPN7,PTPN7,PTPN7,PTPN7	-991,-7403,-7403,-7403,-9000,-7403
chr17:44933348-44933941	chr17	+	44933354	44933789	True	NM_003396,NM_030753	chr17,chr17	+,-	WNT9B,WNT3	-4440,-37272
chr12:56356795-56358035	chr12	+	56356984	56357724	True	NM_001200053,NM_006928,NM_001798,NM_001200054,NM_052827	chr12,chr12,chr12,chr12,chr12	-,-,+,-,+	PMEL,PMEL,CDK2,PMEL,CDK2	2172,2822,2831,2172,2831
chr12:54654038-54655372	chr12	+	54654341	54655070	True	NM_002136,NM_001127322,NM_001127321	chr12,chr12,chr12	+,-,-	HNRNPA1,CBX5,CBX5	19417,-1012,-971
chr10:6338326-6339183	chr10	+	6338475	6339145	True	NM_004566,NM_000417	chr10,chr10	+,-	PFKFB3,IL2RA	-93686,-234142
chr19:15160316-15162025	chr19	+	15160436	15161772	True	NM_006844,NM_012114	chr19,chr19	-,+	ILVBL,CASP14	74855,-196
chr17:39328975-39330467	chr17	+	39329247	39330401	True	NM_033062,NM_001190460,NM_033187	chr17,chr17,chr17	-,+,-	KRTAP4-2,KRTAP9-1,KRTAP4-3	4109,15737,-4823
chr16:20923890-20925190	chr16	+	20923917	20925064	True	NM_001128302,NM_173475	chr16,chr16	+,-	LYRM1,DCUN1D3	-11906,-12356
chr20:2820890-2821332	chr20	+	2820895	2821375	True	NM_080413,NM_022760,NM_022575	chr20,chr20,chr20	+,-,+	VPS16,FAM113A,VPS16	-3,7,-3
chr1:230993132-230994226	chr1	+	230993313	230994051	True	NM_016452,NM_001136495	chr1,chr1	+,-	CAPN9,C1orf198	-110203,-1531
chr19:54617929-54618660	chr19	+	54617962	54618632	True	NM_013342,NM_015629	chr19,chr19	-,+	TFPT,PRPF31	473,157
chr2:27712623-27713515	chr2	+	27712630	27713383	True	NM_022823,NM_015662,NM_001486	chr2,chr2,chr2	-,-,+	FNDC4,IFT172,GCKR	4794,-59,6322
chr2:143677563-143678090	chr2	+	143677650	143678112	True	NM_018557,NM_003937	chr2,chr2	-,+	LRP1B,KYNU	-788380,-42518
chr7:141251437-141252866	chr7	+	141251618	141252600	True	NM_018238,NM_001080392	chr7,chr7	+,-	AGK,KIAA1147	-591,149403
chr7:128784127-128784745	chr7	+	128784127	128784717	True	NM_178562,NR_034053	chr7,chr7	+,-	TSPAN33,TNPO3	-6,-88900
chr22:43254551-43255046	chr22	+	43254743	43255095	True	NM_001142293,NM_014570,NR_029422	chr22,chr22,chr22	-,-,+	ARFGAP3,ARFGAP3,RNU12	-1335,-1335,-243543
chrX:135233313-135233726	chrX	+	135233323	135233594	True	NM_001173517,NM_001159700,NR_027621,NM_001449,NM_001159703,NM_001159702	chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,+	MAP7D3,FHL1,FHL1,FHL1,FHL1,FHL1	100195,-2637,-4513,-3815,-3815,-3815
chr7:98476925-98477335	chr7	+	98476962	98477354	True	NR_037403,NM_001134450,NM_001134451,NM_152913,NM_003496	chr7,chr7,chr7,chr7,chr7	+,-,-,-,+	MIR3609,TMEM130,TMEM130,TMEM130,TRRAP	1918,-9289,-9289,-9289,-900
chr11:62031816-62032647	chr11	+	62031820	62032690	True	NM_002411,NM_206998	chr11,chr11	+,-	SCGB2A2,SCGB1D4	4939,33897
chr11:126093415-126094222	chr11	+	126093571	126094024	True	NM_032795,NM_024556	chr11,chr11	-,+	RPUSD4,FAM118B	-11984,-12013
chr15:68872691-68873101	chr15	+	68872837	68873139	True	NM_006091,NM_001004439	chr15,chr15	+,-	CORO2B,ITGA11	-1315,-148345
chr9:133817223-133818004	chr9	+	133817235	133817833	True	NM_001145106,NM_032843,NM_006059	chr9,chr9,chr9	-,-,+	FIBCD1,FIBCD1,LAMC3	-2780,-2996,66670
chr1:223853645-223853968	chr1	+	223853659	223853933	True	NM_001146068,NM_001143962	chr1,chr1	+,-	CAPN2,CAPN8	35361,-223
chr6:170190246-170190745	chr6	+	170190245	170190695	True	NR_026781,NR_026780	chr6,chr6	-,+	NCRNA00242,C6orf208	8276,-127
chr1:149983643-149985105	chr1	+	149983894	149985126	True	NM_007259,NM_020205	chr1,chr1	+,-	VPS45,OTUD7B	54215,-1208
chr3:113773199-113774979	chr3	+	113773770	113775011	True	NM_020817,NM_024638	chr3,chr3	-,+	KIAA1407,QTRTD1	499,599
chr5:74640721-74641997	chr5	+	74640775	74641847	True	NM_000859,NM_001130996,NM_001164443	chr5,chr5,chr5	+,+,-	HMGCR,HMGCR,ANKRD31	-7840,-7840,-108072
chr3:48644633-48645348	chr3	+	48645153	48645247	True	NM_033629,NM_003365	chr3,chr3	+,-	TREX1,UQCRC1	-137975,1911
chr12:6559770-6560138	chr12	+	6559911	6560121	True	NM_001242,NM_018009,NR_015382	chr12,chr12,chr12	+,+,-	CD27,TAPBPL,LOC678655	-5911,1055,612
chr15:59062110-59063193	chr15	+	59062282	59063210	True	NM_001040450,NM_001110,NM_001040453	chr15,chr15,chr15	+,-,+	FAM63B,ADAM10,FAM63B	182,-20105,182
chr1:38102676-38104046	chr1	+	38102792	38104090	True	NM_001038633,NM_018101	chr1,chr1	-,+	RSPO1,CDCA8	-2301,54068
chr1:154941867-154942435	chr1	+	154941878	154942276	True	NM_003029,NM_001826,NR_036212,NR_024163,NM_138300,NM_001130041,NM_001130040,NM_183001,NM_001202859	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,+,-,-,-,-,-	SHC1,CKS1B,MIR4258,CKS1B,PYGO2,SHC1,SHC1,SHC1,SHC1	4733,4841,5892,4841,-7620,4733,997,997,4733
chr9:74677484-74679396	chr9	+	74677838	74679383	True	NM_004293,NM_001128618	chr9,chr9	+,-	GDA,C9orf57	84909,-2317
chr5:81610018-81611666	chr5	+	81610029	81611701	True	NM_001017971,NM_001025	chr5,chr5	+,-	ATP6AP1L,RPS23	-8921,-35794
chrX:65294908-65295389	chrX	+	65295033	65295415	True	NR_029637,NM_007268	chrX,chrX	+,-	MIR223,VSIG4	-56372,-35066
chr4:44017618-44018686	chr4	+	44017643	44018671	True	NM_198353,NM_021927	chr4,chr4	-,+	KCTD8,GUF1	432203,661761
chr17:34943640-34944207	chr17	+	34943648	34943928	True	NM_001033580,NM_024308	chr17,chr17	-,+	MYO19,DHRS11	-52343,4297
chr9:123548791-123549397	chr9	+	123548969	123549269	True	NR_027442,NM_012164	chr9,chr9	+,-	LOC100288842,FBXW2	6505,6521
chr6:28412942-28414767	chr6	+	28412962	28414739	True	NM_001509,NM_001012455	chr6,chr6	+,-	GPX5,ZSCAN23	79049,-1683
chr11:108402039-108403578	chr11	+	108402258	108403573	True	NM_153705,NM_004398	chr11,chr11	-,+	KDELC2,DDX10	-33099,132242
chr7:27175283-27176248	chr7	+	27175443	27176287	True	NM_002141,NM_019102,NM_153631,NR_002795	chr7,chr7,chr7,chr7	-,-,-,+	HOXA4,HOXA5,HOXA3,HOXA11-AS1	-5044,7050,-8804,48739
chr19:50018108-50019249	chr19	+	50018992	50019198	True	NM_004107,NM_001136019,NR_029703	chr19,chr19,chr19	+,+,-	FCGRT,FCGRT,MIR150	-2607,-3507,-14867
chrX:106163928-106164368	chrX	+	106163934	106164337	True	NM_001171095,NM_138382,NM_020384	chrX,chrX,chrX	+,-,+	CLDN2,RIPPLY1,CLDN2	-2400,-17373,-384
chr2:203776357-203776671	chr2	+	203776390	203776687	True	NM_024744,NM_018256,NM_001104586	chr2,chr2,chr2	+,-,+	ALS2CR8,WDR12,ALS2CR8	429,312,290
chr5:140168074-140168633	chr5	+	140168182	140168685	True	NM_031410,NM_031411,NM_002109,NM_031495,NM_018900,NM_018905	chr5,chr5,chr5,chr5,chr5,chr5	+,+,-,+,+,+	PCDHA1,PCDHA1,HARS,PCDHA2,PCDHA1,PCDHA2	-2357,-2357,-97211,5758,-2357,5758
chr12:104852437-104852993	chr12	+	104852458	104852964	True	NM_006166,NM_001173982,NM_018413	chr12,chr12,chr12	-,+,+	NFYB,CHST11,CHST11	-320418,-1817,-1817
chr13:21278514-21278922	chr13	+	21278775	21278919	True	NM_138284,NM_174928	chr13,chr13	+,-	IL17D,N6AMT2	-1344,69188
chr20:21686618-21687026	chr20	+	21686788	21686880	True	NM_002509,NM_006192	chr20,chr20	-,+	NKX2-2,PAX1	-192124,-542
chr5:69481972-69483015	chr5	+	69482324	69482632	True	NM_022877,NR_024054	chr5,chr5	+,-	SMN2,LOC100170939	-137034,39046
chr5:69481972-69483015	chr5	-	21512322	21512592	False	NR_027026,NM_004061	chr5,chr5	+,-	GUSBP1,CDH12	-52784,1341198
chr5:69481972-69483015	chr5	-	69227149	69227457	False	NM_022968,NR_027386	chr5,chr5	+,-	SERF1A,GUSBP3	93614,-220877
chr5:69481972-69483015	chr5	-	70102199	70102507	False	NM_022968,NM_004536	chr5,chr5	+,-	SERF1A,NAIP	93982,218493
chr5:69481972-69483015	chr5	+	70482719	70483027	False	NR_003922,NR_033968	chr5,chr5	+,-	PMCHL2,LOC100049076	188584,72151
chr11:118097157-118098782	chr11	+	118097364	118098728	True	NM_001098526,NM_000733	chr11,chr11	-,+	AMICA1,CD3E	-1555,76566
chr13:21521247-21523200	chr13	+	21521714	21523042	True	NM_022459,NM_005870	chr13,chr13	-,+	XPO4,SAP18	-44801,191610
chr6:167738024-167739471	chr6	+	167738281	167739214	True	NM_004610,NM_031949	chr6,chr6	-,+	TCP10,TTLL2	58835,242
chr2:74751932-74752239	chr2	+	74752026	74752284	True	NM_133637,NM_181575,NM_145074,NM_013247	chr2,chr2,chr2,chr2	-,-,+,+	DQX1,AUP1,HTRA2,HTRA2	1174,4740,4247,4247
chr12:111128576-111130244	chr12	+	111129235	111130175	True	NM_001040107,NM_032369,NM_001173975	chr12,chr12,chr12	-,-,+	HVCN1,HVCN1,TCTN1	-1618,-2289,-77381
chr19:39807401-39807919	chr19	+	39807417	39807952	True	NM_172140,NM_020862	chr19,chr19	+,-	IL29,LRFN1	-20503,-1441
chr4:148404057-148405577	chr4	+	148404131	148405610	True	NM_138364,NR_028596,NM_001957,NM_001166055	chr4,chr4,chr4,chr4	-,+,+,+	PRMT10,EDNRA,EDNRA,EDNRA	199720,-2121,-2121,-2121
chr1:168096442-168097692	chr1	+	168097067	168097730	True	NM_153832,NM_001031800	chr1,chr1	-,+	GPR161,TIPRL	7945,50440
chr22:24371474-24371700	chr22	+	24371689	24371756	True	NM_001144931,NM_000853	chr22,chr22	+,-	LOC391322,GSTT1	1360,12585
chr18:76828692-76828917	chr18	+	76828697	76828903	True	NM_198531,NM_001146343	chr18,chr18	+,-	ATP9B,PQLC1	493,882800
chr20:56883122-56883471	chr20	+	56883289	56883495	True	NR_003505,NM_020673	chr20,chr20	-,+	PPP4R1L,RAB22A	1050,1275
chr1:26439079-26439700	chr1	+	26439099	26439497	True	NR_026685,NR_026686,NM_032588,NM_152835	chr1,chr1,chr1,chr1	+,+,-,+	PDIK1L,PDIK1L,TRIM63,PDIK1L	-1494,-882,-44978,-882
chr17:72918558-72918788	chr17	+	72918557	72918625	True	NM_178160,NM_173477	chr17,chr17	+,-	OTOP2,USH1G	1744,776
chr19:12887102-12887692	chr19	+	12887506	12887566	True	NM_002229,NM_013312,NM_001100176	chr19,chr19,chr19	+,-,-	JUNB,HOOK2,HOOK2	14743,-1072,-1072
chr19:42569915-42570389	chr19	+	42570103	42570405	True	NM_022752,NM_002088	chr19,chr19	+,-	ZNF574,GRIK5	9884,-146
chr13:36920931-36921172	chr13	+	36920977	36921227	True	NM_015087,NM_001111046,NM_001142296,NM_001142295	chr13,chr13,chr13,chr13	-,+,-,-	SPG20,CCNA1,SPG20,SPG20	-331,84739,-331,-43
chr11:117949591-117949882	chr11	+	117949594	117949880	True	NM_001173551,NM_001173552,NM_001142349,NM_001083947,NM_019894	chr11,chr11,chr11,chr11,chr11	+,+,-,+,+	TMPRSS4,TMPRSS4,SCN4B,TMPRSS4,TMPRSS4	-1919,-1919,66354,-1919,-1919
chr2:64871906-64872368	chr2	+	64872087	64872366	True	NM_014755,NR_034023	chr2,chr2	-,+	SERTAD2,LOC339807	8730,-37693
chr14:74109923-74110694	chr14	+	74110007	74110592	True	NM_031427,NM_001201366,NM_006029	chr14,chr14,chr14	+,+,-	DNAL1,DNAL1,PNMA1	985,985,70594
chr16:1462778-1463289	chr16	+	1462885	1462979	True	NM_032520,NM_001193388,NM_001037125	chr16,chr16,chr16	+,-,-	GNPTG,UNKL,UNKL	-61036,1776,1776
chr18:30051266-30052347	chr18	+	30051411	30052351	True	NR_003558,NM_022751	chr18,chr18	+,-	WBP11P1,FAM59A	39274,-964
chr11:64891518-64892051	chr11	+	64891733	64892073	True	NM_001997,NR_037568,NR_037567,NM_014205,NM_032431,NM_172230,NM_004927	chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,+,+,-,-,-,+	FAU,MRPL49,MRPL49,ZNHIT2,SYVN1,SYVN1,MRPL49	-2061,-2068,-2129,-6563,9980,9980,-2068
chr11:111170399-111170636	chr11	+	111170498	111170564	True	NM_001136105,NR_034154	chr11,chr11	+,-	C11orf93,C11orf92	-573,25
chr5:124180071-124180583	chr5	+	124180209	124180592	True	NM_004384,NM_020747	chr5,chr5	+,-	CSNK1G3,ZNF608	-1332474,-99404
chr7:124570101-124570815	chr7	+	124570187	124570633	True	NR_003102,NR_003103,NM_001042594,NR_003104,NM_015450,NM_001174046	chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,+	POT1,POT1,POT1,POT1,POT1,SPAM1	-150,-150,-150,-150,-150,-1004329
chr17:42910779-42912154	chr17	+	42910910	42911753	True	NM_016438,NM_001080383,NM_005497	chr17,chr17,chr17	+,-,-	HIGD1B,GJC1,GJC1	13525,-2731,-3303
chr14:21504241-21505535	chr14	+	21504261	21505463	True	NM_001012264,NM_032572,NM_173846	chr14,chr14,chr14	-,+,+	RNASE13,RNASE7,TPPP2	-1317,4921,-5968
chr1:28238527-28239819	chr1	+	28238909	28239808	True	NM_001009568,NM_002946	chr1,chr1	+,-	SMPDL3B,RPA2	21695,1479
chr13:114240138-114241531	chr13	+	114240159	114241440	True	NM_000705,NM_007111,NR_026580	chr13,chr13,chr13	-,+,+	ATP4B,TFDP1,TFDP1	71124,-1167,-1220
chr17:48130690-48131917	chr17	+	48130704	48131743	True	NM_005220,NM_002204,NM_005501	chr17,chr17,chr17	-,+,+	DLX3,ITGA3,ITGA3	-58116,1596,1596
chr18:906635-907003	chr18	+	906760	906946	True	NM_001117,NM_001099733,NM_005433	chr18,chr18,chr18	+,+,-	ADCYAP1,ADCYAP1,YES1	-1514,-1867,-94433
chr7:75157908-75158327	chr7	+	75158034	75158377	True	NM_001099435,NR_028059	chr7,chr7	+,-	SPDYE5,PMS2P3	-33791,-581
chr17:73289835-73290631	chr17	+	73289872	73290638	True	NM_021734,NM_001126122,NM_001126121,NR_036520	chr17,chr17,chr17,chr17	-,-,-,+	SLC25A19,SLC25A19,SLC25A19,LOC100287042	-4342,-4342,-4342,-22551
chr1:216567411-216568151	chr1	+	216567500	216568065	True	NM_206933,NM_016121	chr1,chr1	-,+	USH2A,KCTD3	28730,-826817
chr12:13253740-13254079	chr12	+	13253782	13253976	True	NM_001080555,NM_001080554,NM_031289,NM_020853,NM_153823	chr12,chr12,chr12,chr12,chr12	-,-,-,+,-	GSG1,GSG1,GSG1,KIAA1467,GSG1	2693,2693,-5073,-56519,-5073
chr19:53756794-53758119	chr19	+	53757231	53757933	True	NM_182609,NM_173856	chr19,chr19	-,+	ZNF677,VN1R2	228,3611
chr1:153329779-153330255	chr1	+	153329792	153330272	True	NM_020393,NM_002965	chr1,chr1	-,+	PGLYRP4,S100A9	-8770,57
chr4:114652900-114653202	chr4	+	114653051	114653201	True	NR_031641,NR_037887	chr4,chr4	+,-	MIR1243,LOC100507209	-625090,-3739
chr11:9116973-9118542	chr11	+	9117243	9118574	True	NM_020974,NM_001170690,NR_027713	chr11,chr11,chr11	-,-,+	SCUBE2,SCUBE2,KRT8P41	-4093,-4093,-1384
chr3:164709835-164710402	chr3	+	164709872	164710410	True	NM_001041,NM_001122752	chr3,chr3	-,+	SI,SERPINI1	85934,2743021
chr19:4277709-4278208	chr19	+	4277995	4278195	True	NM_001169126,NM_020209	chr19,chr19	-,+	TMIGD2,SHD	24283,402
chr14:77599364-77600133	chr14	+	77599399	77600071	True	NM_174976,NM_033426	chr14,chr14	-,+	ZDHHC22,KIAA1737	8113,-34873
chr1:201183351-201184734	chr1	+	201183649	201184468	True	NM_001164586,NM_016456	chr1,chr1	+,-	IGFN1,TMEM9	-23747,-60017
chr19:38085203-38085553	chr19	+	38085278	38085600	True	NM_001172225,NM_001172226,NM_016536	chr19,chr19,chr19	+,+,-	ZNF540,ZNF540,ZNF571	130,130,123
chr14:24974898-24975361	chr14	+	24974924	24975384	True	NM_015299,NM_001836	chr14,chr14	+,-	KHNYN,CMA1	-75834,2137
chr17:43664171-43664817	chr17_ctg5_hap1	+	529000	529050	False	NM_001193465,NR_034172	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	KIAA1267,LOC644246	34447,66386
chr17:43664171-43664817	chr17_ctg5_hap1	-	1203880	1203930	False	NR_026901,NR_037772	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LOC644172,CRHR1	-15492,-33427
chr17:43664171-43664817	chr17_ctg5_hap1	-	1423431	1423481	False	NR_002940,NM_016632	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LRRC37A4,ARL17A	57895,90453
chr17:43664171-43664817	chr17	+	43664267	43664739	True	NR_026901,NR_037772	chr17,chr17	-,+	LOC644172,CRHR1	15059,32970
chr17:43664171-43664817	chr17	-	44336891	44336941	False	NM_001193465,NM_014834	chr17,chr17	-,+	KIAA1267,LRRC37A	-34151,35555
chr1:165549209-165550830	chr1	+	165549241	165550787	True	NR_026744,NM_001005214	chr1,chr1	-,+	LOC400794,LRRC52	617,-35814
chr8:8007043-8008046	chr8	+	8007800	8008032	True	NR_031689,NR_024362	chr8,chr8	-,+	MIR548I3,FLJ10661	-61189,78059
chr8:8007043-8008046	chr8	-	12372665	12372715	False	NR_026789,NM_001137610	chr8,chr8	+,-	FAM66A,FAM86B2	-153188,-78813
chr19:46368263-46369390	chr19	+	46368277	46369268	True	NM_004819,NM_004497	chr19,chr19	-,+	SYMPK,FOXA3	-1729,-810
chr7:7217068-7218707	chr7	+	7217096	7218746	True	NM_020156,NR_034022	chr7,chr7	+,-	C1GALT1,LOC100131257	3499,-80679
chr1:16694473-16694873	chr1	+	16694477	16694819	True	NM_018994,NM_015609,NM_001114600	chr1,chr1,chr1	-,+,+	FBXO42,C1orf144,C1orf144	-15529,-945,-945
chr14:102094951-102095271	chr14	+	102094980	102095254	True	NR_031649,NM_001362	chr14,chr14	-,+	MIR1247,DIO3	-68221,-67343
chr11:32109958-32111473	chr11	+	32109982	32111210	True	NM_001127612,NM_002901	chr11,chr11	-,+	PAX6,RCN1	-270473,1266
chr5:112199520-112200373	chr5	+	112199728	112200390	True	NM_001204199,NM_001204196,NM_001204194,NM_001204193,NM_005669,NM_003135	chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,-,+	SRP19,SRP19,SRP19,SRP19,REEP5,SRP19	-2902,-2902,-2902,-2902,57691,-2902
chr21:34914996-34915268	chr21	+	34915016	34915196	True	NM_175085,NM_138927,NM_000819,NM_001136005,NM_032195,NM_001136006	chr21,chr21,chr21,chr21,chr21,chr21	-,+,-,-,+,-	GART,SON,GART,GART,SON,GART	-552,153,-552,49,153,52
chr10:21433577-21434652	chr10	+	21433717	21434686	True	NM_001177483,NM_001010896,NM_001195627	chr10,chr10,chr10	-,-,+	C10orf113,C10orf113,MLLT10	852,852,388414
chr14:81862458-81863122	chr14	+	81862523	81863041	True	NM_033104,NM_000369	chr14,chr14	-,+	STON2,TSHR	1938,-440705
chr6:118250216-118252062	chr6	+	118250488	118252076	True	NM_020399,NM_001029858	chr6,chr6	-,+	GOPC,SLC35F1	-326783,-21860
chr17:35768430-35769573	chr17	+	35768657	35769577	True	NM_001488,NM_001166105,NM_133439,NM_198839,NM_198834	chr17,chr17,chr17,chr17,chr17	+,+,+,-,-	TADA2A,TADA2A,TADA2A,ACACA,ACACA	-1396,-1731,-1396,-1755,-1755
chr21:46711350-46711620	chr21	+	46711392	46711510	True	NM_133635,NR_026943,NR_004858,NM_015227	chr21,chr21,chr21,chr21	-,+,-,-	POFUT2,LOC642852,POFUT2,POFUT2	-3581,-3476,-3581,-3581
chr5:56205404-56205667	chr5	+	56205499	56205565	True	NM_153706,NM_001171990,NM_152622	chr5,chr5,chr5	+,+,-	C5orf35,C5orf35,MIER3	-463,-463,42439
chr12:53777083-53777912	chr12	+	53777133	53777697	True	NM_138473,NM_001173467,NM_003109	chr12,chr12,chr12	+,-,+	SP1,SP7,SP1	-3205,-47129,-2756
chr11:67119835-67120145	chr11	+	67119986	67120080	True	NM_021173,NR_024469	chr11,chr11	-,+	POLD4,LOC100130987	1022,-34727
chr2:218615427-218616039	chr2	+	218615620	218615944	True	NR_034176,NR_026597	chr2,chr2	+,-	RUFY4,DIRC3	283712,5422
chr1:13358488-13359647	chr1	+	13358941	13359185	True	NM_001013692,NM_001010889,NM_001013407	chr1,chr1,chr1	-,+,+	PRAMEF3,PRAMEF6,PRAMEF5	-27249,647,633
chr1:13358488-13359647	chr1	-	13118384	13118434	False	NM_001100631,NM_001013407	chr1,chr1	+,-	PRAMEF22,PRAMEF5	-82892,-633
chr1:13358488-13359647	chr1	-	13008053	13008297	False	NM_001100631,NM_001010889	chr1,chr1	+,-	PRAMEF22,PRAMEF6	27245,-647
chr16:85642607-85643474	chr16	+	85642612	85643253	True	NM_001134473,NM_014615,NM_016095	chr16,chr16,chr16	+,+,-	KIAA0182,KIAA0182,GINS2	1775,3670,79385
chr6:161059717-161060937	chr6	+	161060475	161060830	True	NM_001168338,NM_005577	chr6,chr6	+,-	PLG,LPA	62394,26628
chr6:161059717-161060937	chr6	+	161066022	161066377	False	NM_001168338,NM_005577	chr6,chr6	+,-	PLG,LPA	56847,21081
chr6:161059717-161060937	chr6	+	161038292	161038647	False	NM_001168338,NM_005577	chr6,chr6	+,-	PLG,LPA	84577,48811
chr6:161059717-161060937	chr6	+	161043838	161044193	False	NM_001168338,NM_005577	chr6,chr6	+,-	PLG,LPA	79031,43265
chr6:161059717-161060937	chr6	+	161049382	161049737	False	NM_001168338,NM_005577	chr6,chr6	+,-	PLG,LPA	73487,37721
chr6:170201737-170202243	chr6	+	170201788	170202200	True	NR_026781,NR_026780	chr6,chr6	-,+	NCRNA00242,C6orf208	-2867,-11670
chr6:142940315-142941368	chr6	+	142940325	142941193	True	NR_027311,NM_198569	chr6,chr6	-,+	LOC153910,GPR126	17834,-317327
chr1:150265111-150265894	chr1	+	150265299	150265909	True	NM_018997,NM_016022,NM_031901	chr1,chr1,chr1	+,-,+	MRPS21,APH1A,MRPS21	359,-23767,359
chr19:19030494-19030745	chr19	+	19030544	19030758	True	NR_033677,NM_199444,NM_199442,NM_019070,NM_007263	chr19,chr19,chr19,chr19,chr19	+,-,-,+,-	DDX49,COPE,COPE,DDX49,COPE	-111,-345,-345,-111,-345
chr22:23523839-23524100	chr22	+	23523843	23524083	True	NM_004327,NM_021574,NM_014433	chr22,chr22,chr22	+,+,-	BCR,BCR,RTDR1	-1342,-1342,-39602
chr19:10217286-10217582	chr19	+	10217381	10217581	True	NM_002566,NM_031917,NM_001198690,NR_003688,NR_004381,NM_001040664,NM_020230	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+,+	P2RY11,ANGPTL6,PPAN-P2RY11,SNORD105B,SNORD105,PPAN-P2RY11,PPAN	4615,-3956,-533,2843,745,-533,-533
chr17:79604172-79604544	chr17	+	79604253	79604462	True	NM_017921,NM_031945	chr17,chr17	-,+	NPLOC4,TSPAN10	-115,4886
chr15:27113509-27113764	chr15	+	27113552	27113811	True	NM_001165037,NM_000810,NM_021912	chr15,chr15,chr15	+,+,-	GABRA5,GABRA5,GABRB3	-1330,-1737,-94617
chr17:62399718-62400234	chr17	+	62399756	62400070	True	NM_000442,NM_001085423	chr17,chr17	-,+	PECAM1,C17orf60	7063,61498
chr19:7659958-7660399	chr19	+	7660146	7660448	True	NM_020196,NM_020902,NM_001080429	chr19,chr19,chr19	-,+,+	XAB2,KIAA1543,KIAA1543	34041,339,339
chr1:172524077-172525035	chr1	+	172524087	172525071	True	NM_016227,NM_153747	chr1,chr1	+,-	C1orf9,PIGC	-21821,-110857
chr11:68050539-68050951	chr11	+	68050591	68050971	True	NM_022338,NM_002335	chr11,chr11	-,+	C11orf24,LRP5	-11122,29136
chr22:24998972-24999186	chr22	+	24998975	24999204	True	NM_005265,NM_207644,NM_001032365,NM_001032364	chr22,chr22,chr22,chr22	+,-,+,+	GGT1,C22orf36,GGT1,GGT1	-25,-9940,4421,66
chrX:134295975-134296449	chrX	+	134295975	134296456	True	NM_001031705,NM_017863,NM_001078171	chrX,chrX,chrX	-,-,+	CXorf48,CXorf48,FAM127A	9350,9350,-129703
chr16:90127012-90127803	chr16	+	90127087	90127841	True	NM_052996,NR_023348	chr16,chr16	-,+	PRDM7,GAS8	942,-38130
chr10:17176171-17176528	chr10	+	17176337	17176526	True	NM_001081,NM_003380	chr10,chr10	-,+	CUBN,VIM	-4521,93731
chrX:50657391-50657799	chrX	+	50657621	50657785	True	NM_005448,NR_027121,NR_003933	chrX,chrX,chrX	+,-,+	BMP15,SHROOM4,LOC347376	-3945,-100577,-9248
chr8:145150773-145151029	chr8	+	145150826	145151022	True	NM_001916,NM_030974,NM_032272	chr8,chr8,chr8	+,-,+	CYC1,SHARPIN,MAF1	-917,8168,8282
chr2:171570498-171570832	chr2	+	171570652	171570758	True	NM_001003845,NR_027433	chr2,chr2	+,-	SP5,LOC440925	1098,369
chr17:38803680-38803895	chr17	+	38803692	38803910	True	NM_001195387,NM_003079	chr17,chr17	+,-	TMEM99,SMARCE1	171433,243
chr22:31611320-31612395	chr22	+	31611357	31612431	True	NR_037496,NM_005569	chr22,chr22	-,+	MIR3928,LIMK2	-55252,-3158
chr3:128446748-128447396	chr3	+	128446747	128447298	True	NM_002950,NM_004637	chr3,chr3	-,+	RPN1,RAB7A	-77028,-1824
chr6:44224035-44224315	chr6	+	44224051	44224363	True	NM_007355,NM_004556,NM_178148	chr6,chr6,chr6	+,-,-	HSP90AB1,NFKBIE,SLC35B2	-9253,9212,970
chr16:2319663-2320979	chr16	+	2319944	2320966	True	NR_037448,NM_080594,NM_006711,NR_030636	chr16,chr16,chr16,chr16	+,-,-,+	MIR3677,RNPS1,RNPS1,MIR940	207,-1531,-2086,781
chr7:133846724-133847000	chr7	+	133846753	133847015	True	NM_032826,NM_144648	chr7,chr7	-,+	SLC35B4,LRGUK	154862,-34707
chr18:8717688-8718690	chr18	+	8717889	8718575	True	NM_015210,NR_024419	chr18,chr18	+,-	KIAA0802,LOC100192426	-571,-350857
chr17:7140522-7141125	chr17	+	7140551	7141036	True	NM_203415,NM_004422,NM_007278,NM_024297	chr17,chr17,chr17,chr17	+,-,-,-	C17orf81,DVL2,GABARAP,PHF23	14335,-2688,4774,1846
chr16:30717342-30718682	chr16	+	30717357	30718505	True	NR_002966,NM_001014979,NM_006662	chr16,chr16,chr16	+,-,+	SNORA30,C16orf93,SRCAP	3352,55110,-6948
chrX:134847722-134848046	chrX	+	134847734	134848068	True	NM_001017417,NM_001017436	chrX,chrX	+,-	CT45A1,CT45A4	-600,88717
chr15:85521729-85522143	chr15	+	85521756	85522168	True	NM_173454,NM_014300,NM_002605	chr15,chr15,chr15	+,-,+	PDE8A,SEC11A,PDE8A	3036,-262082,3036
chr8:85095004-85095431	chr8	+	85095050	85095272	True	NM_001099670,NM_001100391,NM_001100392,NM_001100393,NM_173848	chr8,chr8,chr8,chr8,chr8	-,+,+,+,+	C8orf59,RALYL,RALYL,RALYL,RALYL	1037421,1827,180,180,313
chr2:101925629-101926328	chr2	+	101925754	101926192	True	NM_173647,NM_017546	chr2,chr2	-,+	RNF149,C2orf29	-576,-56474
chr5:159614237-159615054	chr5	+	159614345	159614708	True	NM_001130958,NM_001130864	chr5,chr5	+,-	FABP6,PWWP2A	-23,-67893
chr4:77228115-77228407	chr4	+	77228161	77228375	True	NM_003943,NM_005506	chr4,chr4	+,-	STBD1,SCARB2	-535,-93109
chr20:1106211-1107376	chr20	+	1106215	1107250	True	NM_018354,NM_006814	chr20,chr20	-,+	C20orf46,PSMF1	57918,-7026
chr6:10727880-10729459	chr6	+	10728082	10729246	True	NM_001165258,NR_026736,NM_016462	chr6,chr6,chr6	+,-,+	TMEM14C,C6orf52,TMEM14C	-4997,-33052,-4997
chr17:61920614-61921576	chr17	+	61920678	61921457	True	NR_002947,NM_001098426	chr17,chr17	+,-	TCAM1P,SMARCD2	12918,-327
chr16:10785727-10786243	chr16	+	10785819	10786243	True	NM_002484,NM_144674	chr16,chr16	+,-	NUBP1,TEKT5	51454,2609
chr22:21272574-21272970	chr22	+	21272666	21272852	True	NM_058004,NM_005207	chr22,chr22	-,+	PI4KA,CRKL	-59596,-1003
chrX:117636841-117637113	chrX	+	117636893	117636975	True	NM_001168301,NM_144658	chrX,chrX	-,+	KLHL13,DOCK11	-385590,-7074
chrX:138729054-138730250	chrX	+	138729167	138730013	True	NM_001171879,NM_001171878,NM_005369,NM_000133,NM_001171877	chrX,chrX,chrX,chrX,chrX	-,-,-,+,-	MCF2,MCF2,MCF2,F9,MCF2	-4167,-4167,-4167,-116332,-4167
chr16:14012014-14012561	chr16	+	14012075	14012602	True	NM_005236,NM_001134477	chr16,chr16	+,-	ERCC4,PARN	1411,711571
chr17:77707264-77707660	chr17	+	77707328	77707682	True	NM_178543,NM_020649	chr17,chr17	+,-	ENPP7,CBX8	-2497,63283
chr20:10655879-10656608	chr20	+	10655950	10656472	True	NM_001009608,NM_000214	chr20,chr20	+,-	C20orf94,JAG1	-240060,-1256
chr20:13955388-13956540	chr20	+	13955595	13956479	True	NM_080676,NM_025229	chr20,chr20	+,-	MACROD2,SEL1L2	19666,14843
chr1:110612168-110612430	chr1	+	110612251	110612367	True	NM_033088,NM_006492	chr1,chr1	+,-	FAM40A,ALX3	-35061,1005
chr6:137112684-137113055	chr6	+	137112782	137113030	True	NM_000288,NM_005923	chr6,chr6	+,-	PEX7,MAP3K5	30671,676
chr22:29874673-29875467	chr22	+	29874705	29875149	True	NR_002727,NM_021076	chr22,chr22	-,+	RFPL1S,NEFH	-36587,1031
chr3:114015902-114016403	chr3	+	114016016	114016416	True	NR_030293,NM_173799	chr3,chr3	-,+	MIR568,TIGIT	19050,-3241
chr14:23878590-23879288	chr14	+	23878737	23879181	True	NR_030624,NM_002471,NM_138460	chr14,chr14,chr14	-,-,+	MIR208B,MYH6,CMTM5	8141,-1251,-32771
chr1:228326405-228327421	chr1	+	228326502	228327394	True	NM_000858,NM_181465,NM_001159390,NM_001159391	chr1,chr1,chr1,chr1	+,-,+,+	GUK1,MRPL55,GUK1,GUK1	534,-29489,534,5009
chr20:62587081-62587310	chr20	+	62587148	62587308	True	NM_017859,NM_001193379,NR_027287	chr20,chr20,chr20	-,-,+	UCKL1,UCKL1,UCKL1-AS1	542,-4621,-2462
chr22:37581313-37581723	chr22	+	37581390	37581758	True	NM_013385,NM_182486,NM_031910	chr22,chr22,chr22	+,-,-	CYTH4,C1QTNF6,C1QTNF6	96736,2622,2622
chr11:118402949-118403726	chr11	+	118403129	118403671	True	NM_001144038,NM_001144035,NM_001144034,NM_001144037,NM_001144036,NM_001080441,NM_001168618,NM_032780	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,+,-,+	TMEM25,TMEM25,TMEM25,TMEM25,TMEM25,TTC36,IFT46,TMEM25	-1377,-1377,-1377,-1377,-1377,-4970,33170,-1377
chr2:203734003-203735715	chr2	+	203734246	203735655	True	NM_178231,NM_001104586,NM_138468	chr2,chr2,chr2	-,+,-	ICA1L,ALS2CR8,ICA1L	590,41322,766
chr22:38080721-38081505	chr22	+	38080873	38081505	True	NM_002305,NM_006498,NM_024313	chr22,chr22,chr22	+,-,+	LGALS1,LGALS2,NOL12	-9311,-104849,838
chr17:26974308-26974960	chr17	+	26974727	26974938	True	NM_014680,NM_003170	chr17,chr17	-,+	KIAA0100,SUPT6H	-2554,14363
chr6:17985350-17987009	chr6	+	17985385	17986931	True	NM_001105568,NM_153042,NM_022113,NM_001105566,NM_001105567	chr6,chr6,chr6,chr6,chr6	-,+,-,-,-	KIF13A,KDM1B,KIF13A,KIF13A,KIF13A	918,168687,918,918,918
chr17:46691818-46692019	chr17	+	46691850	46692074	True	NM_024016,NM_004502,NM_018952,NR_033205	chr17,chr17,chr17,chr17	-,-,-,+	HOXB8,HOXB7,HOXB6,LOC404266	283,-3467,-9516,-18581
chr16:69417966-69419121	chr16	+	69417996	69419157	True	NM_030579,NM_005652	chr16,chr16	+,-	CYB5B,TERF2	39340,767
chr1:38157144-38157524	chr1	+	38157185	38157523	True	NM_017850,NM_018101	chr1,chr1	-,+	C1orf109,CDCA8	-993,635
chr19:49218751-49218973	chr19	+	49218793	49218887	True	NM_001130915,NM_001097638,NM_182574	chr19,chr19,chr19	-,+,-	MAMSTR,FUT2,MAMSTR	4139,-19616,1377
chr18:59160543-59161844	chr18	+	59160655	59161871	True	NM_031891,NM_173557	chr18,chr18	+,-	CDH20,RNF152	-2931,398483
chr5:55526212-55527072	chr5	+	55526226	55526978	True	NM_024669,NM_139017	chr5,chr5	-,+	ANKRD55,IL31RA	2272,-378951
chr19:18723233-18723688	chr19	+	18723300	18723434	True	NM_012109,NM_004750	chr19,chr19	+,-	TMEM59L,CRLF1	247,-5640
chr11:33776502-33777449	chr11	+	33777143	33777497	True	NM_012175,NM_012194	chr11,chr11	-,+	FBXO3,C11orf41	18624,-213328
chr15:74422051-74422438	chr15	+	74422203	74422453	True	NM_001130137,NM_001130136,NM_020851,NR_027073,NM_001130138	chr15,chr15,chr15,chr15,chr15	+,+,+,-,+	ISLR2,ISLR2,ISLR2,LOC283731,ISLR2	-258,-539,289,-584,136
chr3:112932607-112933138	chr3	+	112932781	112933183	True	NR_027796,NM_033254	chr3,chr3	-,+	C3orf17,BOC	-194226,-1457
chr9:19407515-19408438	chr9	+	19407873	19408311	True	NM_001010,NM_001010887	chr9,chr9	-,+	RPS6,ACER2	-27638,613
chr10:119783455-119785036	chr10	+	119783644	119785064	True	NM_014904,NR_026941	chr10,chr10	-,+	RAB11FIP2,CASC2	21103,21267
chr1:155239877-155240645	chr1	+	155240212	155240694	True	NM_052837,NM_003993,NM_020897,NM_005698	chr1,chr1,chr1,chr1	-,-,+,-	SCAMP3,CLK2,HCN3,SCAMP3	-8017,2637,6679,-8017
chr4:77365235-77365740	chr4	+	77365491	77365605	True	NM_001042784,NM_020859	chr4,chr4	-,+	CCDC158,SHROOM3	-37033,-9294
chr2:43824381-43825550	chr2	+	43824467	43825449	True	NM_022065,NM_001083953,NM_172069	chr2,chr2,chr2	-,-,+	THADA,THADA,PLEKHH2	-1282,-1354,38989
chr17:27369387-27369849	chr17	+	27369428	27369888	True	NM_016518,NM_004740	chr17,chr17	+,-	PIPOX,TIAF1	29,32789
chr9:126033176-126034270	chr9	+	126033308	126034275	True	NM_173689,NM_001171137,NM_018387,NR_033234	chr9,chr9,chr9,chr9	+,-,-,-	CRB2,STRBP,STRBP,STRBP	84172,-2453,-2465,-2465
chr19:14801243-14802647	chr19	+	14801288	14802372	True	NM_032433,NM_032571	chr19,chr19	+,-	ZNF333,EMR3	-469,-15558
chr16:57222693-57222996	chr16	+	57222710	57222885	True	NM_133368,NM_024946	chr16,chr16	+,-	RSPRY1,FAM192A	-2526,-2734
chr10:92981353-92981999	chr10	+	92981395	92982031	True	NR_002779,NM_032373	chr10,chr10	-,+	NUDT9P1,PCGF5	-68558,-1083
chr11:64903399-64903728	chr11	+	64903459	64903751	True	NM_032431,NM_172230,NR_037568	chr11,chr11,chr11	-,-,+	SYVN1,SYVN1,MRPL49	-1456,-1456,-13794
chr4:925348-925584	chr4	+	925347	925632	True	NM_005255,NM_032326	chr4,chr4	-,+	GAK,TMEM175	592,629
chr1:202684467-202684906	chr1	+	202684483	202684898	True	NR_002929,NM_177402	chr1,chr1	+,-	LOC148709,SYT2	145983,-4932
chr8:42912955-42914262	chr8	+	42913209	42914282	True	NR_027669,NR_033698,NM_002027	chr8,chr8,chr8	-,+,+	RNF170,FNTA,FNTA	-161343,-1831,-1831
chr4:100871279-100871482	chr4	+	100871285	100871507	True	NM_001031723,NM_002106,NR_002799	chr4,chr4,chr4	-,-,+	DNAJB14,H2AFZ,LOC256880	-3406,55,128
chr12:49261218-49261761	chr12	+	49261480	49261632	True	NM_014470,NM_033124	chr12,chr12	-,+	RND1,CCDC65	-1827,36260
chr8:103668771-103669023	chr8	+	103668810	103668904	True	NM_024410,NM_005655,NM_001032282	chr8,chr8,chr8	+,-,-	ODF1,KLF10,KLF10	-105013,-827,-2642
chr15:33011644-33013096	chr15	+	33011879	33013018	True	NM_013372,NM_001191323,NM_001191322,NR_036650	chr15,chr15,chr15,chr15	+,+,+,-	GREM1,GREM1,GREM1,LOC100288615	-1726,-1726,-1726,-185937
chr3:183950489-183950993	chr3	+	183950590	183950998	True	NM_005787,NR_030410,NM_138345	chr3,chr3,chr3	-,+,+	ALG3,MIR1224,VWA5B2	15811,8194,-2324
chr5:37244245-37245108	chr5	+	37244413	37244944	True	NM_018034,NM_023073	chr5,chr5	+,-	WDR70,C5orf42	134467,4636
chr2:176046630-176048107	chr2	+	176046685	176048031	True	NM_024583,NM_001689,NM_001002258,NM_001190329	chr2,chr2,chr2,chr2	+,-,-,-	SCRN3,ATP5G3,ATP5G3,ATP5G3	-786280,-195,-294,-195
chr9:107508053-107509430	chr9	+	107508282	107509431	True	NM_015469,NM_001001956	chr9,chr9	+,-	NIPSNAP3A,OR13C9	537,-127797
chr3:187925944-187926188	chr3	+	187925952	187926236	True	NM_005578,NR_036497	chr3,chr3	+,-	LPP,LOC339929	4484,-54076
chr6:4706542-4706746	chr6	+	4706549	4706662	True	NR_026590,NM_006638	chr6,chr6	+,-	CDYL,RPP40	-209,297664
chr16:57700009-57701526	chr16	+	57700013	57701478	True	NM_001130099,NM_033212,NM_170776	chr16,chr16,chr16	-,-,+	KIFC3,CCDC102A,GPR97	130501,-129536,678
chr19:30018346-30018723	chr19	+	30018410	30018746	True	NM_001031726,NM_001146339	chr19,chr19	-,+	C19orf12,VSTM2B	187267,-970
chr17:37025264-37025553	chr17	+	37025312	37025429	True	NM_000978,NM_006148	chr17,chr17	-,+	RPL23,LASP1	-15259,682
chr17:39135676-39136443	chr17	+	39135792	39136485	True	NM_033061,NM_182497	chr17,chr17	+,-	KRTAP4-7,KRT40	103973,6953
chr17:79901242-79901705	chr17	+	79901607	79901715	True	NR_015454,NM_153824,NM_001145113,NM_006907	chr17,chr17,chr17,chr17	+,-,-,-	LOC92659,PYCR1,MYADML2,PYCR1	-15964,-6639,3444,-6639
chr12:122515330-122515631	chr12	+	122515359	122515527	True	NM_014938,NM_001014336	chr12,chr12	+,-	MLXIP,IL31	1232,143271
chr2:198063439-198063688	chr2	+	198063544	198063640	True	NM_001195144,NM_025147	chr2,chr2	-,+	ANKRD44,COQ10B	111931,254590
chr8:38459224-38459606	chr8	+	38459256	38459570	True	NR_003129,NM_001146216	chr8,chr8	-,+	RNF5P1,TACC1	-481,126133
chr5:110838090-110838574	chr5	+	110838555	110838627	True	NM_001744,NM_139164	chr5,chr5	+,-	CAMK4,STARD4	-278668,9584
chr2:242046396-242047701	chr2	+	242046766	242047588	True	NR_028049,NM_182501,NM_002712,NR_028051,NR_028050	chr2,chr2,chr2,chr2,chr2	-,-,+,-,-	MTERFD2,MTERFD2,PPP1R7,MTERFD2,MTERFD2	-5019,-5019,42313,-5019,-5019
chr8:74826266-74827268	chr8	+	74826830	74827228	True	NM_001040613,NM_018299	chr8,chr8	+,-	TMEM70,UBE2W	61148,-35720
chrX:13752862-13753121	chrX	+	13752962	13753078	True	NM_001128835,NM_001011658,NM_014563,NM_003611	chrX,chrX,chrX,chrX	-,-,-,+	TRAPPC2,TRAPPC2,TRAPPC2,OFD1	-208,-208,-208,-181
chr1:65433541-65434057	chr1	+	65433671	65434083	True	NM_203464,NM_002227	chr1,chr1	+,-	AK4,JAK1	179148,-1484
chr18:37313614-37315017	chr18	+	37314065	37315050	True	NR_024391,NR_036202	chr18,chr18	-,+	LOC647946,MIR4318	16970,-2077029
chr20:19194521-19194968	chr20	+	19194528	19194891	True	NR_024564,NM_020689	chr20,chr20	-,+	LOC100130264,SLC24A3	70399,-1289
chr7:65019794-65020035	chr7	+	65019837	65019913	True	NM_000181,NR_027392	chr7,chr7	-,+	GUSB,INTS4L2	427438,92863
chr7:65019794-65020035	chr7	+	64974023	64974097	False	NM_152626,NM_000181	chr7,chr7	+,-	ZNF92,GUSB	-135306,473254
chr7:65019794-65020035	chr7	-	65112537	65112613	False	NM_000181,NR_027392	chr7,chr7	-,+	GUSB,INTS4L2	334738,163
chr7:65019794-65020035	chr16	+	32822718	32823089	False	NR_003083,NM_016212	chr16,chr16	-,+	SLC6A10P,TP53TG3	73743,381890
chr20:29524935-29525256	chr20	+	29524938	29525178	True	NM_001037731,NR_003579	chr20,chr20	-,+	DEFB116,FRG1B	371260,86700
chr4:142053563-142053789	chr4	+	142053704	142053770	True	NM_020724,NM_014487	chr4,chr4	-,+	RNF150,ZNF330	896,88278
chr3:142443350-142443821	chr3	+	142443386	142443708	True	NM_003304,NM_001184	chr3,chr3	+,-	TRPC1,ATR	-171,-145718
chr9:85045568-85045811	chr9	+	85045719	85045779	True	NM_152573,NM_001001670	chr9,chr9	-,+	RASEF,FAM75D1	632314,-442090
chr2:223917334-223917582	chr2	+	223917340	223917434	True	NM_080671,NM_005687	chr2,chr2	+,-	KCNE4,FARSB	-529,-396513
chr1:107684542-107684921	chr1	+	107684563	107684925	True	NM_001113226,NM_001113228,NM_001079874,NM_014917	chr1,chr1,chr1,chr1	+,+,-,+	NTNG1,NTNG1,VAV3,NTNG1	-1992,-1992,546251,-1876
chr18:3219628-3220104	chr18	+	3219728	3220146	True	NM_019856,NM_006471,NM_003803	chr18,chr18,chr18	-,+,-	MYOM1,MYL12A,MYOM1	14,27381,14
chr9:119460062-119460344	chr9	+	119460168	119460296	True	NM_012210,NM_001184735	chr9,chr9	+,-	TRIM32,ASTN2	-10638,-10626
chr16:2033692-2034013	chr16	+	2033751	2033993	True	NM_144603,NM_172168,NM_004209,NM_172167,NM_005262	chr16,chr16,chr16,chr16,chr16	-,-,+,-,+	NOXO1,NOXO1,SYNGR3,NOXO1,GFER	-2311,-2567,5952,-2567,156
chr14:100788340-100789145	chr14	+	100788397	100788995	True	NM_001039355,NM_207117	chr14,chr14	-,+	SLC25A29,SLC25A47	-15537,683
chrX:151866310-151867158	chrX	+	151866417	151867204	True	NM_001129826,NM_005363,NM_175868	chrX,chrX,chrX	-,+,+	CSAG3,MAGEA6,MAGEA6	10516,40,40
chrX:151866310-151867158	chrX	-	151938265	151939052	False	NM_001129826,NM_005362	chrX,chrX	+,-	CSAG3,MAGEA3	-10505,-25
chr13:42008060-42008599	chr13	+	42008394	42008472	True	NM_004294,NR_002163	chr13,chr13	-,+	MTRF1,OR7E37P	-170681,8227
chr1:2988202-2988536	chr1	+	2988206	2988530	True	NM_022114,NR_024371,NR_015440,NM_199454	chr1,chr1,chr1,chr1	+,-,-,+	PRDM16,FLJ42875,FLJ42875,PRDM16	-2515,-3917,-3917,-2515
chr10:120353497-120353934	chr10	+	120353515	120353913	True	NM_004248,NM_199461	chr10,chr10	-,+	PRLHR,NANOS1	1297,435314
chr15:59036072-59037996	chr15	+	59036200	59038035	True	NM_001040450,NM_001110	chr15,chr15	+,-	FAM63B,ADAM10	25357,4192
chr10:131935475-131936293	chr10	+	131935511	131935859	True	NM_006541,NM_001199868,NR_034125	chr10,chr10,chr10	+,+,-	GLRX3,GLRX3,LOC387723	-923,-923,-26430
chr12:8274841-8275092	chr12	+	8274866	8275036	True	NM_016184,NM_194450,NR_036440,NM_194447,NM_194448	chr12,chr12,chr12,chr12,chr12	+,+,-,+,+	CLEC4A,CLEC4A,POU5F1P3,CLEC4A,CLEC4A	1191,1191,12462,1191,1191
chr19:7463301-7464457	chr19	+	7463723	7464330	True	NR_024491,NM_015318	chr19,chr19	-,+	LOC100128573,ARHGEF18	73982,-3775
chr12:93772248-93772449	chr12	+	93772414	93772498	True	NM_003348,NM_199040,NM_019094,NR_002212	chr12,chr12,chr12,chr12	-,+,+,+	UBE2N,NUDT4,NUDT4,NUDT4P1	63578,-764,-764,-719
chr11:44585043-44585307	chr11	+	44585089	44585265	True	NM_021926,NM_002231,NM_001024844	chr11,chr11,chr11	-,+,+	ALX4,CD82,CD82	-253373,1875,1875
chr7:99755414-99755630	chr7	+	99755413	99755543	True	NM_018275,NM_001008395	chr7,chr7	-,+	C7orf43,C7orf59	809,-8934
chr11:33035288-33036488	chr11	+	33035326	33036462	True	NM_139160,NM_001077242,NM_001326	chr11,chr11,chr11	+,+,-	DEPDC7,DEPDC7,CSTF3	1265,947,146625
chr19:19324897-19325488	chr19	+	19324927	19325533	True	NM_176880,NM_004386	chr19,chr19	-,+	NR2C2AP,NCAN	-10689,-2196
chrY:14484562-14485954	chrY	+	14484765	14485827	True	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	288470,47619
chr14:90078258-90079183	chr14	+	90078360	90078865	True	NR_024620,NM_001085471	chr14,chr14	+,-	PRO1768,FOXN3	-35851,6680
chr2:167164401-167165152	chr2	+	167164400	167164592	True	NM_001079810,NM_002977	chr2,chr2	+,-	XIRP2,SCN9A	580404,67963
chr17:41175216-41175876	chr17	+	41175518	41175789	True	NM_006373,NM_005440	chr17,chr17	-,+	VAT1,RND2	-1059,1468
chr10:93684560-93685359	chr10	+	93684565	93685217	True	NM_152429,NM_003972	chr10,chr10	-,+	FGFBP3,BTAF1	-15307,-888
chr1:108509929-108510758	chr1	+	108510169	108510579	True	NM_001143987,NM_006113	chr1,chr1	+,-	NBPF6,VAV3	482324,-2624
chr7:75507662-75508165	chr7	+	75507798	75508160	True	NM_001040456,NM_001040457,NM_002991	chr7,chr7,chr7	+,+,-	RHBDD2,RHBDD2,CCL24	156,156,-64765
chr19:50095987-50096215	chr19	+	50096123	50096191	True	NM_015953,NM_020719	chr19,chr19	-,+	NOSIP,PRR12	-12320,-1262
chr7:73037876-73038086	chr7	+	73037909	73038041	True	NM_032951,NM_032952,NM_032953,NM_032954,NM_001077621	chr7,chr7,chr7,chr7,chr7	-,-,-,-,+	MLXIPL,MLXIPL,MLXIPL,MLXIPL,VPS37D	879,879,879,879,44132
chr5:14148305-14149628	chr5	+	14148425	14149385	True	NM_001369,NM_007118	chr5,chr5	-,+	DNAH5,TRIO	-203836,-4662
chr14:24712775-24713191	chr14	+	24713031	24713184	True	NM_001099274,NM_012461,NM_016576	chr14,chr14,chr14	-,-,+	TINF2,TINF2,GMPR2	-1151,-1151,-10979
chr4:75305881-75307357	chr4	+	75306118	75307009	True	NM_001657,NM_002089	chr4,chr4	+,-	AREG,CXCL2	3843,-341121
chr4:75305881-75307357	chr4	+	75475916	75476807	False	NM_001657,NM_001729	chr4,chr4	+,-	AREG,BTC	3821,243126
chr17:8299990-8300706	chr17	+	8300186	8300603	True	NM_001146684,NM_001025579	chr17,chr17	-,+	RNF222,NDEL1	592,38575
chrX:44732746-44732979	chrX	+	44732759	44732911	True	NM_176819,NM_021140	chrX,chrX	-,+	CXorf36,KDM6A	327285,-387
chr12:9068347-9069336	chr12	+	9068350	9069301	True	NM_004426,NM_002355	chr12,chr12	+,-	PHC1,M6PR	-1089,33009
chr12:122752756-122753033	chr12	+	122752842	122752924	True	NM_030765,NM_022916	chr12,chr12	+,-	B3GNT4,VPS33A	-64669,-1774
chr2:40006347-40007582	chr2	+	40006618	40007415	True	NM_152390,NM_025264,NR_028102	chr2,chr2,chr2	+,-,-	TMEM178,THUMPD2,THUMPD2	-113641,-202,-202
chr3:101495639-101497325	chr3	+	101495816	101497226	True	NM_145037,NM_001134456,NM_000986	chr3,chr3,chr3	+,+,-	FAM55C,FAM55C,RPL24	802,1059,-90253
chr19:49559983-49560282	chr19	+	49560016	49560300	True	NM_033183,NM_006179,NM_033043,NM_033142	chr19,chr19,chr19,chr19	-,-,+,-	CGB8,NTF4,CGB5,CGB7	-7648,6874,-12965,-1019
chr1:169966731-169968458	chr1	+	169967071	169968480	True	NM_001136107,NM_001204517	chr1,chr1	+,-	METTL11B,KIFAP3	146707,69627
chr2:10859322-10860548	chr2	+	10859658	10860558	True	NM_001039362,NM_144583,NM_024894	chr2,chr2,chr2	+,+,-	ATP6V1C2,ATP6V1C2,NOL10	1216,1216,-29546
chr14:21851369-21851874	chr14	+	21851369	21851908	True	NM_014828,NR_003029,NM_007192	chr14,chr14,chr14	+,-,-	TOX4,SNORD9,SUPT16H	93426,8554,567
chr9:85663132-85663893	chr9	+	85663160	85663774	True	NM_152573,NM_001001551	chr9,chr9	-,+	RASEF,C9orf103	14327,574258
chr21:46062480-46063976	chr21	+	46062815	46063791	True	NM_198698,NM_181688,NM_198692	chr21,chr21,chr21	-,+,+	KRTAP12-4,KRTAP10-10,KRTAP10-11	10835,-5601,2539
chr5:111092805-111093015	chr7	-	23520236	23520287	True	NM_006547,NR_026676	chr7,chr7	-,+	IGF2BP3,RPS2P32	-10241,9719
chr8:134118953-134120523	chr8	+	134118996	134120176	True	NM_001045556,NM_001045557,NM_001204869	chr8,chr8,chr8	-,-,+	SLA,SLA,WISP1	-3686,-3686,83105
chr21:33652112-33653526	chr21	+	33652200	33653410	True	NM_178817,NM_018944	chr21,chr21	+,-	MRAP,MIS18A	10713,-824
chr7:72741909-72742328	chr7	+	72742146	72742214	True	NM_001135211,NM_003602,NM_178125	chr7,chr7,chr7	+,+,-	FKBP6,FKBP6,TRIM50	-42,85,-61
chr2:130898903-130899251	chr2	+	130898918	130899266	True	NM_207310,NR_033903	chr2,chr2	-,+	CCDC74B,LOC285103	3415,-11773
chr2:130898903-130899251	chr2	-	132288931	132289187	False	NM_001085365,NM_138770	chr2,chr2	-,+	MZT2A,CCDC74A	-38867,-3490
chr19:12590538-12591351	chr19	+	12590710	12591130	True	NM_152601,NM_153358	chr19,chr19	-,+	ZNF709,ZNF791	4552,130601
chr7:75620882-75621156	chr7	+	75621011	75621205	True	NM_031925,NR_002955	chr7,chr7	-,+	TMEM120A,SNORA14A	2837,-47969
chr16:2881291-2881591	chr16	+	2881410	2881640	True	NR_026864,NM_145252	chr16,chr16	-,+	PRSS30P,ZG16B	11162,-1288
chr20:21685177-21685473	chr20	+	21685205	21685469	True	NM_002509,NM_006192	chr20,chr20	-,+	NKX2-2,PAX1	-190541,827
chr20:48730216-48731525	chr20	+	48730259	48731116	True	NM_021988,NM_001032288,NM_022442,NM_005194,NM_199144	chr20,chr20,chr20,chr20,chr20	-,-,-,+,-	UBE2V1,UBE2V1,UBE2V1,CEBPB,UBE2V1	1438,-549,1435,76259,1438
chr2:113381681-113382712	chr2	+	113381984	113382548	True	NR_033871,NM_005415	chr2,chr2	-,+	FLJ42351,SLC20A1	19273,20885
chrX:110013030-110014483	chrX	+	110013174	110014490	True	NM_001128166,NM_145234	chrX,chrX	+,-	PAK3,CHRDL1	173022,24643
chr15:75316847-75317560	chr15	+	75317080	75317608	True	NM_017793,NM_021823	chr15,chr15	-,+	RPP25,PPCDC	-67305,-1204
chr9:132223422-132223685	chr9	+	132223517	132223685	True	NM_199350,NM_001012715	chr9,chr9	-,+	C9orf50,C9orf106	159420,-140273
chr5:75011057-75012898	chr5	+	75011574	75012928	True	NM_152408,NM_016218,NM_001099271	chr5,chr5,chr5	-,+,-	POC5,POLK,POC5	-3294,-203968,435
chr7:72336985-72338027	chr7	+	72337466	72337546	True	NR_003666,NM_172020	chr7,chr7	-,+	SPDYE7P,POM121	2159,12389
chr12:113910283-113910839	chr12	+	113910422	113910694	True	NM_022363,NM_138432	chr12,chr12	-,+	LHX5,SDSL	-545,-50257
chr10:102294089-102295663	chr10	+	102294305	102295627	True	NM_017902,NM_005004	chr10,chr10	+,-	HIF1AN,NDUFB8	13,-4669
chr11:49643085-49644029	chr11	+	49643146	49643929	True	NR_027044,NM_001005270	chr11,chr11	+,-	LOC440040,OR4C12	-63118,360199
chr11:49643085-49644029	chr11	-	88736321	88736372	False	NM_001143831,NM_000372	chr11,chr11	-,+	GRM5,TYR	44919,174667
chr12:50344560-50344908	chr12	+	50344640	50344888	True	NM_000486,NR_026948	chr12,chr12	+,-	AQP2,LOC283332	-167,-38994
chr20:3763811-3764377	chr20	+	3763927	3764422	True	NM_001810,NM_015417,NM_004358	chr20,chr20,chr20	-,-,+	CENPB,SPEF1,CDC25B	2965,-1825,11978
chr1:27153608-27154160	chr1	+	27154054	27154170	True	NM_018066,NM_032283	chr1,chr1	-,+	GPN2,ZDHHC18	62749,-905
chr5:96135721-96137477	chr5	+	96135836	96136895	True	NR_033798,NM_001040458,NM_016442	chr5,chr5,chr5	+,-,-	CAST,ERAP1,ERAP1	-56643,7054,7054
chr16:23197239-23197500	chr16	+	23197246	23197534	True	NM_001039,NM_020718	chr16,chr16	+,-	SCNN1G,USP31	-3257,-36655
chr11:119251820-119252055	chr11	+	119251917	119252103	True	NM_004205,NR_034160	chr11,chr11	-,+	USP2,LOC100499227	383,384
chr6:161684230-161684445	chr6	+	161684230	161684298	True	NM_006724,NM_020133	chr6,chr6	+,-	MAP3K4,AGPAT4	-271459,10859
chr2:69263658-69264692	chr2	+	69263660	69264570	True	NM_032208,NM_182536	chr2,chr2	+,-	ANTXR1,GKN2	-23436,-83558
chr19:41501972-41503146	chr19	+	41502090	41503174	True	NM_030589,NM_000767	chr19,chr19	-,+	CYP2A7,CYP2B6	-113433,-4944
chr19:41501972-41503146	chr19	+	41436095	41436145	False	NM_030589,NR_001278	chr19,chr19	-,+	CYP2A7,CYP2B7P1	-47438,-5976
chr21:45344574-45345073	chr21	+	45344702	45344998	True	NR_026961,NM_001037553	chr21,chr21	-,+	LOC284837,AGPAT3	-112254,280
chr1:110448127-110448385	chr1	+	110448182	110448310	True	NM_172210,NM_000757,NM_172212,NM_139053,NM_172211	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	CSF1,CSF1,CSF1,EPS8L3,CSF1	4922,4922,4922,-141538,4922
chr19:11094932-11095684	chr19	+	11095007	11095703	True	NM_001128846,NM_001128847,NM_024029,NM_001128845,NM_001128848	chr19,chr19,chr19,chr19,chr19	+,+,-,+,+	SMARCA4,SMARCA4,YIPF2,SMARCA4,SMARCA4	-230,-230,-55650,-230,-230
chr3:196596553-196597306	chr3	+	196596795	196597335	True	NM_152699,NM_001042540	chr3,chr3	+,-	SENP5,NCBP2	-2119,72186
chr10:18637591-18637972	chr10	+	18637721	18637791	True	NM_182543,NM_201590	chr10,chr10	-,+	NSUN6,CACNB2	302809,-8165
chr1:179922700-179923617	chr1	+	179922917	179923559	True	NM_014810,NM_022347	chr1,chr1	+,-	CEP350,TOR1AIP2	348,-75976
chr12:27076530-27077406	chr12	+	27076615	27077405	True	NM_001171888,NM_018164	chr12,chr12	+,-	FGFR1OP2,C12orf11	13899,13899
chr11:57276377-57276782	chr11	+	57276608	57276672	True	NM_003627,NM_001198810,NM_001105565	chr11,chr11,chr11	-,-,+	SLC43A1,SLC43A1,SMTNL1	6570,5736,33441
chr19:36266945-36267626	chr19	+	36267147	36267665	True	NM_052948,NM_144617,NM_001172630	chr19,chr19,chr19	+,-,+	ARHGAP33,HSPB6,ARHGAP33	-781,-19217,-781
chr7:7255950-7256755	chr7	+	7255978	7256759	True	NM_020156,NR_034022	chr7,chr7	+,-	C1GALT1,LOC100131257	-33783,-119561
chr2:60780481-60780962	chr2	+	60780553	60780779	True	NM_022894,NM_022893,NM_138559,NM_018014	chr2,chr2,chr2,chr2	+,-,-,-	PAPOLG,BCL11A,BCL11A,BCL11A	202585,80,80,80
chr19:56274119-56275559	chr19	+	56274206	56275406	True	NM_001145014,NM_176820	chr19,chr19	+,-	RFPL4A,NLRP9	-3750,-24438
chr19:56274119-56275559	chr19	+	56284992	56285050	False	NM_001145014,NM_176820	chr19,chr19	+,-	RFPL4A,NLRP9	-14544,-35224
chr5:36064423-36066311	chr5	+	36064674	36066226	True	NM_174914,NM_005983,NM_001168316,NR_031764	chr5,chr5,chr5,chr5	-,+,-,-	UGT3A2,SKP2,UGT3A2,UGT3A2	847,85962,847,847
chr9:93596740-93597674	chr9	+	93596904	93597722	True	NM_017594,NM_001174167	chr9,chr9	-,+	DIRAS2,SYK	-191796,-7251
chr1:1179980-1180733	chr1	+	1180014	1180735	True	NM_080605,NM_001014980	chr1,chr1	+,-	B3GALT6,FAM132A	-12436,1417
chr13:111523893-111524351	chr13	+	111523980	111524292	True	NM_005537,NR_027701	chr13,chr13	+,-	ING1,C13orf29	-156679,-1325
chrX:46695238-46696084	chrX	+	46695412	46696072	True	NM_032591,NM_006915	chrX,chrX	-,+	SLC9A7,RP2	-76940,274
chr9:108423177-108424016	chr9	+	108423216	108423912	True	NM_005502,NM_005421	chr9,chr9	-,+	ABCA1,TAL2	-732689,825
chr8:69371759-69372069	chr8	+	69371782	69372054	True	NM_052958,NM_020361	chr8,chr8	+,-	C8orf34,CPA6	-128882,-713162
chr16:83987291-83988617	chr16	+	83987674	83988647	True	NM_013370,NM_001080442,NM_182981,NM_182980	chr16,chr16,chr16,chr16	+,-,+,+	OSGIN1,SLC38A8,OSGIN1,OSGIN1	-5053,87165,-898,-5053
chr12:10089295-10089576	chr12	+	10089356	10089608	True	NM_138337,NM_001130711	chr12,chr12	+,-	CLEC12A,CLEC2A	34399,-4376
chr20:47837067-47837267	chr20	+	47837073	47837237	True	NM_017454,NM_017895	chr20,chr20	-,+	STAU1,DDX27	-32169,-1292
chr4:142567321-142569059	chr4	+	142567466	142568960	True	NM_020724,NR_037840,NM_000585,NM_172175	chr4,chr4,chr4,chr4	-,+,+,+	RNF150,IL15,IL15,IL15	-512850,-9769,-9769,-9769
chr19:19754718-19755640	chr19	+	19754830	19755680	True	NM_033204,NM_016573	chr19,chr19	+,-	ZNF101,GMIP	23982,-375
chr5:53814494-53814703	chr5	+	53814634	53814750	True	NM_052870,NM_001145427,NM_019087,NM_001102575	chr5,chr5,chr5,chr5	+,+,-,+	SNX18,SNX18,ARL15,SNX18	-1092,-1096,-208231,-1092
chr17:44441838-44442698	chr17_ctg5_hap1	-	388369	388704	False	NM_006178,NM_001113738,NM_001039083,NM_016632,NM_001103154,NR_033799	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	-,+,+,+,+,-	NSF,ARL17A,ARL17B,ARL17A,ARL17B,NSFP1	-7754,2878,2907,2878,2907,-7816
chr17:44441838-44442698	chr17_ctg5_hap1	+	1516761	1517096	False	NM_016632	chr17_ctg5_hap1	-	ARL17A	-2877
chr17:44441838-44442698	chr17	+	44442039	44442374	True	NM_001039083,NM_001113738,NM_001103154,NM_016632,NR_033799	chr17,chr17,chr17,chr17,chr17	-,-,-,-,+	ARL17B,ARL17A,ARL17B,ARL17A,NSFP1	-2905,-2876,-2905,-2876,7804
chr17:44441838-44442698	chr17	+	44659964	44660299	False	NM_001113738,NR_033799,NM_016632,NM_006178	chr17,chr17,chr17,chr17	-,+,-,+	ARL17A,NSFP1,ARL17A,NSF	-2876,7800,-2876,7738
chr9:139688876-139690538	chr9	+	139688893	139690479	True	NM_001039374,NM_032928,NR_024580	chr9,chr9,chr9	+,+,-	KIAA1984,TMEM141,LOC100131193	310,-3167,12871
chr4:83717277-83717642	chr4	+	83717435	83717649	True	NM_024672,NM_001037582,NM_024906	chr4,chr4,chr4	+,-,-	THAP9,SCD5,SCD5	104187,2411,2411
chr17:21904317-21904519	chr17	+	21904463	21904543	True	NM_001113434,NR_027084	chr17,chr17	-,+	C17orf51,FLJ36000	-449522,-452
chr17:21904317-21904519	chr17	+	21906837	21906917	False	NM_001113434,NR_027084	chr17,chr17	-,+	C17orf51,FLJ36000	-451896,-2826
chr16:78135425-78135948	chr16	+	78135586	78135858	True	NM_199355,NM_016373,NM_130791,NM_130844	chr16,chr16,chr16,chr16	-,+,+,+	ADAMTS18,WWOX,WWOX,WWOX	-666575,-2086,-2086,-2086
chr1:31846333-31846724	chr1	+	31846338	31846770	True	NM_001199038,NM_004102	chr1,chr1	+,-	SERINC2,FABP3	35641,-415
chr7:50797441-50797688	chr7	+	50797473	50797719	True	NM_001001549,NM_005311,NR_033845	chr7,chr7,chr7	-,-,+	GRB10,GRB10,LOC100129427	2381,2381,-198081
chr1:32862009-32863534	chr1	+	32862787	32863336	True	NM_052841,NM_001143890,NM_018045,NM_001143889,NM_001143888	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	TSSK3,BSDC1,BSDC1,BSDC1,BSDC1	-34990,-2725,-2725,-2725,-2725
chr6:26043724-26044272	chr6	+	26043794	26044246	True	NM_003513,NM_021062,NM_003531	chr6,chr6,chr6	-,-,+	HIST1H2AB,HIST1H2BB,HIST1H3C	-9998,-63,1392
chr17:38862238-38864087	chr17	+	38862345	38864015	True	NM_019016,NM_001195387	chr17,chr17	-,+	KRT24,TMEM99	-2343,111328
chr8:145516696-145517213	chr8	+	145516763	145517099	True	NM_005526,NM_015201	chr8,chr8	+,-	HSF1,BOP1	-1544,-1643
chr11:59242456-59243943	chr11	+	59242568	59243760	True	NM_001004705,NM_001001954	chr11,chr11	+,-	OR4D10,OR5A2	1142,-52142
chr9:21995195-21995517	chr9	+	21995277	21995525	True	NR_003529,NM_058195	chr9,chr9	+,-	CDKN2B-AS1,CDKN2A	-538,-787
chr2:204569953-204571017	chr2	+	204570012	204570337	True	NM_006139,NM_203365	chr2,chr2	+,-	CD28,RAPH1	860,-169954
chr8:103663745-103664423	chr8	+	103663919	103664443	True	NM_024410,NM_005655,NM_001032282	chr8,chr8,chr8	+,-,-	ODF1,KLF10,KLF10	-100122,3590,1775
chr17:74535039-74536309	chr17	+	74535422	74536322	True	NM_134268,NM_001077620	chr17,chr17	-,+	CYGB,PRCD	-1640,122
chr11:59435751-59435959	chr11	+	59435754	59436004	True	NM_152716,NM_001178040	chr11,chr11	-,+	PATL1,STX3	557,86527
chr10:97317241-97317765	chr10	+	97317321	97317742	True	NM_024991,NM_015385,NM_001098175	chr10,chr10,chr10	-,-,+	SORBS1,SORBS1,ENTPD1	3481,3481,153793
chr20:33814182-33814409	chr20	+	33814195	33814337	True	NM_006690,NM_181468	chr20,chr20	+,-	MMP24,EIF6	201,58219
chr7:72340489-72341925	chr7	+	72340749	72341275	True	NR_003666,NM_172020	chr7,chr7	-,+	SPDYE7P,POM121	-1094,8660
chr8:22000510-22002376	chr8	+	22000650	22002382	True	NM_001172357,NM_025232	chr8,chr8	+,-	SFTPC,REEP4	16801,-1202
chr2:37309907-37310924	chr2	+	37310121	37310892	True	NM_174931,NM_019024	chr2,chr2	+,-	CCDC75,HEATR5B	701,655
chr16:1147435-1147797	chr16	+	1147461	1147845	True	NM_207419,NM_001053	chr16,chr16	-,+	C1QTNF8,SSTR5	-1217,-18731
chr17:656253-657198	chr17	+	656757	657245	True	NM_015721,NR_024120	chr17,chr17	-,+	GEMIN4,DBIL5P	-1256,-908
chr3:36897258-36897715	chr3	+	36897265	36897659	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	88939,137181
chr11:64684729-64684952	chr11	+	64684751	64684915	True	NM_015104,NM_006244	chr11,chr11	-,+	ATG2A,PPP2R5B	-29,7227
chr18:47900950-47901270	chr18	+	47900954	47901296	True	NM_145060,NM_001039535,NM_014593	chr18,chr18,chr18	+,+,-	SKA1,SKA1,CXXC1	95,95,-86262
chr3:184016209-184016917	chr3	+	184016561	184016727	True	NM_033259,NM_002808	chr3,chr3	-,+	CAMK2N2,PSMD2	-37310,294
chr22:45147961-45148238	chr22	+	45148169	45148275	True	NM_181335,NM_001198726,NM_001017526,NM_032287	chr22,chr22,chr22,chr22	+,+,+,-	ARHGAP8,ARHGAP8,ARHGAP8,LDOC1L	162,162,162,-254164
chr12:123918052-123919061	chr12	+	123918263	123918674	True	NM_145058,NM_022717	chr12,chr12	-,+	RILPL2,SNRNP35	2647,23976
chr5:1596203-1598103	chr5	+	1597155	1597880	True	NR_003263,NM_004553	chr5,chr5	-,+	SDHAP3,NDUFS6	-2509,203615
chr5:1596203-1598103	chr5	-	217424	217486	False	NM_004168,NM_145265	chr5,chr5	+,-	SDHA,CCDC127	869,873
chr9:98189352-98190728	chr9	+	98189392	98190763	True	NR_029496,NM_001083607	chr9,chr9	+,-	MIR24-1,PTCH1	-341148,78768
chr1:153652836-153653782	chr1	+	153652841	153653763	True	NM_004515,NM_000906	chr1,chr1	-,+	ILF2,NPR1	-9362,-1728
chr4:85417703-85417986	chr4	+	85417711	85417975	True	NM_001263,NM_006168	chr4,chr4	+,-	CDS1,NKX6-1	86081,1462
chr3:14858861-14859177	chr3	+	14859036	14859198	True	NM_152536,NM_022497	chr3,chr3	+,-	FGD5,MRPS25	1270,247668
chr19:38745103-38745524	chr19	+	38745274	38745430	True	NM_021102,NM_001166103,NM_033256	chr19,chr19,chr19	+,+,-	SPINT2,SPINT2,PPP1R14A	9667,9667,1792
chr19:7831950-7833209	chr19	+	7832066	7833125	True	NR_026709,NM_001144910,NR_026707,NM_001144911,NR_026692,NM_014257,NM_001144905,NM_001144904,NM_001144907,NM_001144906,NM_001144909,NM_001144908,NR_026708	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,-,+,+,+,+,+,+,+,+	CLEC4M,CLEC4M,CLEC4M,CLEC4M,CD209,CLEC4M,CLEC4M,CLEC4M,CLEC4M,CLEC4M,CLEC4M,CLEC4M,CLEC4M	-4082,-4082,-4082,-4082,-19602,-4082,-4082,-4082,-4082,-4082,-4082,-4082,-4082
chr13:111358835-111359848	chr13	+	111358849	111359717	True	NM_198218,NM_198219,NM_005537,NM_024537,NM_198217	chr13,chr13,chr13,chr13,chr13	+,+,+,-,+	ING1,ING1,ING1,CARS2,ING1	5892,5907,7641,-369,5365
chr2:232646366-232646733	chr2	+	232646406	232646766	True	NM_022730,NM_002601	chr2,chr2	+,-	COPS7B,PDE6D	4395,-432
chr16:87737676-87738621	chr16	+	87737702	87738594	True	NM_020655,NM_001184854	chr16,chr16	+,-	JPH3,KLHDC4	-101254,61054
chr1:245027466-245027700	chr1	+	245027486	245027672	True	NM_004501,NM_198076,NM_031844	chr1,chr1,chr1	-,+,-	HNRNPU,FAM36A,HNRNPU	205,-28898,205
chr8:145641914-145642293	chr8	+	145641982	145642206	True	NM_130849,NM_017767,NM_174922,NM_013291	chr8,chr8,chr8,chr8	-,-,+,-	SLC39A4,SLC39A4,ADCK5,CPSF1	117,-65,-44302,-7249
chrX:119076291-119077304	chrX	+	119076494	119077163	True	NM_024528,NM_178813	chrX,chrX	-,+	NKAP,AKAP14	622,-46609
chrX:134232760-134232971	chrX	+	134232866	134232932	True	NR_024493,NM_001078171	chrX,chrX	-,+	NCRNA00087,FAM127A	-133,-66584
chr21:34959239-34960106	chr21	+	34959341	34960147	True	NM_138927,NM_017613	chr21,chr21	+,-	SON,DONSON	-44045,917
chr16:57770648-57772258	chr16	+	57770854	57772118	True	NM_001130099,NM_005886	chr16,chr16	-,+	KIFC3,KATNB1	59861,-1246
chr1:36623782-36624339	chr1	+	36623785	36624367	True	NM_014408,NM_018067	chr1,chr1	-,+	TRAPPC3,MAP7D1	-8718,-2033
chr18:13825449-13826254	chr18	+	13825578	13826224	True	NM_005913,NM_000529	chr18,chr18	+,-	MC5R,MC2R	-86,89361
chr12:112857347-112858306	chr12	+	112857487	112858052	True	NM_002834,NM_001024662	chr12,chr12	+,-	PTPN11,RPL6	-1002,-10044
chr20:34328655-34329114	chr20	+	34328739	34328948	True	NM_184234,NM_004902,NM_016436	chr20,chr20,chr20	-,-,+	RBM39,RBM39,PHF20	1298,1298,30974
chr19:34857713-34859091	chr19	+	34857714	34858835	True	NR_027620,NM_001184722,NM_000175	chr19,chr19,chr19	-,+,+	LOC643719,GPI,GPI	209820,-2120,-1733
chr12:112279218-112279765	chr12	+	112279267	112279727	True	NR_015404,NM_139078,NM_003668	chr12,chr12,chr12	-,+,+	C12orf47,MAPKAPK5,MAPKAPK5	1029,551,551
chr6:19839301-19839516	chr6	+	19839316	19839412	True	NM_001546,NM_001080480	chr6,chr6	+,-	ID4,MBOAT1	-1751,373308
chr10:102502530-102502867	chr10	+	102502702	102502852	True	NM_003990,NM_005004,NM_003989,NM_003988,NM_003987,NM_000278	chr10,chr10,chr10,chr10,chr10,chr10	+,-,+,+,+,+	PAX2,NDUFB8,PAX2,PAX2,PAX2,PAX2	2615,-213066,2615,2615,2615,2615
chr7:150690123-150690674	chr7	+	150690250	150690548	True	NM_172056,NM_000603,NM_001160110,NM_001160111,NM_001160109	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	KCNH2,NOS3,NOS3,NOS3,NOS3	-14848,-2158,343,343,343
chr19:40327258-40327551	chr19	+	40327283	40327539	True	NM_006484,NM_004714,NM_001143832,NM_006483,NM_001436	chr19,chr19,chr19,chr19,chr19	-,-,+,-,-	DYRK1B,DYRK1B,LEUTX,DYRK1B,FBL	-2442,-2442,-60102,-2442,9565
chr1:26125986-26126264	chr1	+	26126009	26126238	True	NM_206926,NM_020451,NR_024498	chr1,chr1,chr1	+,+,-	SEPN1,SEPN1,LOC646471	428,428,23910
chr5:68487261-68488671	chr5	+	68487517	68488572	True	NM_176816,NM_022909	chr5,chr5	-,+	CCDC125,CENPH	127888,-2200
chr1:228672935-228673644	chr1	+	228673080	228673415	True	NM_001010858,NM_033445	chr1,chr1	+,-	RNF187,HIST3H2A	1652,-27520
chr6:37787340-37787547	chr6	+	37787505	37787571	True	NM_153487,NM_021943	chr6,chr6	-,+	MDGA1,ZFAND3	-121739,-249
chr11:71900174-71900409	chr11	+	71900199	71900377	True	NM_016725,NM_016724,NM_005169,NM_016729,NM_000802	chr11,chr11,chr11,chr11,chr11	+,+,-,+,+	FOLR1,FOLR1,PHOX2A,FOLR1,FOLR1	224,224,54893,2795,581
chr15:34593440-34594908	chr15	+	34593440	34594415	True	NM_175741,NM_005135	chr15,chr15	+,-	C15orf55,SLC12A6	43650,16667
chr8:144656063-144656762	chr8	+	144656067	144656697	True	NM_145201,NM_024736,NM_001100878	chr8,chr8,chr8	-,+,-	NAPRT1,GSDMD,C8orf73	3866,-15641,-1139
chr2:178701839-178702291	chr2	+	178701959	178702336	True	NM_001077196,NM_152945	chr2,chr2	-,+	PDE11A,RBM45	51181,274845
chr2:209007441-209008349	chr2	+	209007524	209008196	True	NM_005210,NM_001178000	chr2,chr2	-,+	CRYGB,PIKFYVE	2745,122794
chr22:40572424-40572955	chr22	+	40572459	40572973	True	NM_152512,NM_001162501,NM_015088	chr22,chr22,chr22	-,+,+	ENTHD1,TNRC6B,TNRC6B	-282665,955,955
chr5:35230296-35230524	chr5	+	35230363	35230483	True	NM_194283,NM_000949	chr5,chr5	+,-	DNAJC21,PRLR	-300716,390
chr14:32792925-32794761	chr14	+	32792986	32794546	True	NR_027263,NM_004274	chr14,chr14	-,+	C14orf128,AKAP6	-247081,3932
chr3:129395962-129397362	chr3	+	129396314	129397194	True	NM_153833,NR_033361	chr3,chr3	+,-	H1FOO,TMCC1	-134318,10445
chr10:31319714-31320549	chr10	+	31319713	31320343	True	NM_001174093,NM_001143768,NM_182755,NR_026560,NM_001143771,NM_001143770,NM_001143766,NM_001143767	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,-,-,-,-,-,-,-	ZEB1,ZNF438,ZNF438,ZNF438,ZNF438,ZNF438,ZNF438,ZNF438	287757,573,573,573,573,573,573,573
chr17:78152472-78152838	chr17	+	78152483	78152895	True	NM_052819,NM_024110,NM_014740	chr17,chr17,chr17	+,+,-	CARD14,CARD14,EIF4A3	8703,-253,-31501
chr7:143533428-143533629	chr7	+	143533432	143533615	True	NR_015421,NM_001004685	chr7,chr7	-,+	LOC154761,OR2F2	246,98710
chr7:143533428-143533629	chr7	-	143318230	143318413	False	NM_178561,NM_001130025,NM_173678	chr7,chr7,chr7	-,+,+	CTAGE6P,FAM115C,FAM115C	136480,-237,128
chr7:43909424-43909702	chr7	+	43909577	43909751	True	NM_032014,NM_015983	chr7,chr7	-,+	MRPS24,UBE2D4	-432,56283
chr19:49457505-49458046	chr19	+	49457762	49458014	True	NM_004324,NM_138764,NM_001161587,NM_138763,NM_138761,NR_027882	chr19,chr19,chr19,chr19,chr19,chr19	+,+,-,+,+,+	BAX,BAX,GYS1,BAX,BAX,BAX	102,102,38646,102,102,102
chr9:77644446-77644929	chr9	+	77644557	77644826	True	NM_012383,NM_152420	chr9,chr9	+,-	OSTF1,C9orf41	58571,-1247
chr2:28974434-28974825	chr2	+	28974447	28974827	True	NM_206876,NM_017910,NM_002709	chr2,chr2,chr2	+,-,+	PPP1CB,TRMT61B,PPP1CB	-44,118398,-32
chr9:127532099-127532313	chr9	+	127532118	127532228	True	NM_001489,NM_033334,NM_182487	chr9,chr9,chr9	-,-,+	NR6A1,NR6A1,OLFML2A	1398,1398,7208
chr8:114248106-114250025	chr8	+	114248384	114250043	True	NR_031745,NM_198124	chr8,chr8	+,-	MIR2053,CSMD3	-592713,139390
chr1:37920787-37921074	chr1	+	37920798	37920864	True	NM_022756,NM_025079	chr1,chr1	-,+	MEAF6,ZC3H12A	59550,19254
chr3:179064395-179064648	chr3	+	179064460	179064539	True	NM_033540,NM_171828	chr3,chr3	+,-	MFN1,KCNMB3	940,-79622
chr7:149533299-149534559	chr7	+	149533613	149534156	True	NM_001099220,NR_027040	chr7,chr7	+,-	ZNF862,LOC401431	1352,36846
chr19:16581052-16581443	chr19	+	16581223	16581492	True	NM_021235,NM_032207	chr19,chr19	-,+	EPS15L1,C19orf44	1327,25712
chr2:95960926-95961611	chr2	+	95960985	95961233	True	NM_013434,NM_032788	chr2,chr2	+,-	KCNIP3,ZNF514	1838,-135722
chr4:49313151-49314683	chr4	+	49313279	49314471	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-325065,-404464
chr1:53534551-53535078	chr1	+	53534731	53534949	True	NM_153703,NM_006671,NM_001199082,NM_001199080,NM_001199081	chr1,chr1,chr1,chr1,chr1	+,-,+,+,+	PODN,SLC1A7,PODN,PODN,PODN	-7059,73390,-7059,-7059,-6898
chr10:105212303-105212618	chr10	+	105212464	105212582	True	NR_024552,NM_015916,NM_004210,NM_001001412	chr10,chr10,chr10,chr10	-,-,+,-	CALHM2,CALHM2,NEURL,CALHM1	-302,-302,41152,6116
chr7:116849143-116850151	chr7	+	116849157	116850149	True	NR_002332,NR_002331	chr7,chr7	+,-	ST7OT3,ST7OT2	-26473,-63543
chr16:1875241-1875475	chr16	+	1875277	1875525	True	NM_005326,NM_001040427,NM_031208,NM_001142398,NM_001018104	chr16,chr16,chr16,chr16,chr16	-,-,+,+,+	HAGH,HAGH,FAHD1,FAHD1,FAHD1	1722,1722,1699,1699,1699
chr2:103058202-103059322	chr2	+	103058367	103059329	True	NM_003853,NM_032718	chr2,chr2	+,-	IL18RAP,MFSD9	-23176,294058
chr5:146406555-146406917	chr5	+	146406695	146406926	True	NM_145001,NM_181674	chr5,chr5	+,-	STK32A,PPP2R2B	207652,28827
chr19:10766258-10767722	chr19	+	10766325	10767257	True	NM_017620,NM_012218,NM_153464,NM_001137673,NR_024333,NM_004516	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,-,+	ILF3,ILF3,ILF3,ILF3,LOC147727,ILF3	-1439,-1439,-1439,-1439,-1777,-1439
chr16:81070220-81070730	chr16	+	81070335	81070779	True	NM_020188,NM_015251	chr16,chr16	-,+	C16orf61,ATMIN	-29833,-928
chr14:99177488-99178296	chr14	+	99177781	99178233	True	NM_022898,NM_182560	chr14,chr14	-,+	BCL11B,C14orf177	559639,26
chr4:25508627-25509527	chr4	+	25508934	25509249	True	NM_013367,NM_016955	chr4,chr4	+,-	ANAPC4,SEPSECS	-130138,-346730
chr19:8568646-8569405	chr19	+	8568697	8569390	True	NM_032152,NM_001146175,NM_032370,NM_031203	chr19,chr19,chr19,chr19	-,-,-,+	PRAM1,ZNF414,ZNF414,HNRNPM	-1159,9716,9716,-58945
chr9:46382089-46382423	chr9	+	46382136	46382220	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2751406,305345
chr9:46382089-46382423	chr9	-	46122088	46122172	False	NM_001145196,NR_024060	chr9,chr9	-,+	FAM75A6,FAM27A	-2491358,-395110
chr11:120111706-120112124	chr11	+	120111895	120112047	True	NM_014352,NM_012101	chr11,chr11	+,-	POU2F3,TRIM29	-995,-103032
chr3:125775317-125775694	chr3	+	125775327	125775631	True	NM_001008487,NM_001012337	chr3,chr3	-,+	SLC41A3,ROPN1B	37,-87350
chr14:20105322-20106449	chr22	+	16373069	16374025	False	NM_001005239,NR_001591	chr22,chr22	-,+	OR11H1,psiTPTE22	75829,708775
chr14:20105322-20106449	chr2	+	130691148	130691198	True	NR_026740,NM_032144	chr2,chr2	-,+	LOC389033,RAB6C	742,46036
chr1:202855952-202856395	chr1	+	202856255	202856332	True	NM_002871,NR_002929	chr1,chr1	-,+	RABIF,LOC148709	1984,-25430
chr1:27188585-27189512	chr1	+	27188676	27189376	True	NM_018066,NM_006142	chr1,chr1	-,+	GPN2,SFN	27543,256
chr12:102454148-102454453	chr12	+	102454206	102454366	True	NM_017915,NM_016053	chr12,chr12	+,-	C12orf48,CCDC53	59589,1595
chr5:145563832-145564041	chr5	+	145563916	145563981	True	NM_020117,NM_018989	chr5,chr5	-,+	LARS,RBM27	-1622,19181
chr19:48549681-48550532	chr19	+	48549847	48550579	True	NM_022142,NM_019855	chr19,chr19	+,-	ELSPBP1,CABP5	-51997,-2543
chr6:34394096-34394298	chr6	+	34394096	34394272	True	NM_001203245,NM_001204091,NM_020804,NM_001202470,NM_001014	chr6,chr6,chr6,chr6,chr6	-,-,+,-,-	RPS10,RPS10,PACSIN1,RPS10-NUDT3,RPS10	-278,-194,39580,-194,-194
chr7:31005582-31006550	chr7	+	31005588	31006254	True	NM_001202481,NM_000823	chr7,chr7	-,+	CRHR2,GHRHR	-265869,-2003
chr15:25315689-25316493	chr15	+	25315694	25316464	True	NR_003322,NR_003323,NR_003320,NR_003321,NR_003326,NR_003327,NR_003324,NR_003325,NR_003328,NR_003329,NR_003318,NM_130838,NR_003330,NR_003317	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,+,+,-,+,+	SNORD116-7,SNORD116-8,SNORD116-5,SNORD116-6,SNORD116-11,SNORD116-12,SNORD116-9,SNORD116-10,SNORD116-13,SNORD116-14,SNORD116-3,UBE3A,SNORD116-15,SNORD116-2	-2811,-167,-2811,-5573,4610,5732,1788,2795,7739,8823,1788,334239,9968,-5573
chr8:134070915-134072263	chr8	+	134071089	134072301	True	NM_006748,NM_001204869	chr8,chr8	-,+	SLA,WISP1	352,130980
chr14:96720575-96721049	chr14	+	96720867	96721091	True	NM_018036,NM_000710	chr14,chr14	-,+	ATG2B,BDKRB1	108637,1467
chr10:72434034-72434477	chr10	+	72434094	72434480	True	NM_139155,NM_080722,NM_005041	chr10,chr10,chr10	+,+,-	ADAMTS14,ADAMTS14,PRF1	-1586,-1586,-71563
chr1:166134353-166134563	chr1	+	166134365	166134561	True	NM_001017961,NR_037431	chr1,chr1	-,+	FAM78B,MIR3658	1447,-257258
chr16:69363156-69363803	chr16	+	69363221	69363829	True	NM_022341,NM_001199434,NM_016101,NM_032382	chr16,chr16,chr16,chr16	-,+,+,-	PDF,NIP7,NIP7,COG8	719,9585,9585,9747
chr19:45823883-45825283	chr19	+	45823900	45825235	True	NM_001824,NM_177417	chr19,chr19	-,+	CKM,KLC3	1048,18762
chr1:39401579-39402302	chr1	+	39401906	39401970	True	NM_001136275,NM_017821	chr1,chr1	+,-	AKIRIN1,RHBDL2	54945,5540
chr4:109682826-109683086	chr4	+	109682841	109683135	True	NM_001146627,NR_027474,NR_027475,NM_021227,NM_001146590,NM_031279	chr4,chr4,chr4,chr4,chr4,chr4	-,-,-,+,-,-	AGXT2L1,AGXT2L1,AGXT2L1,OSTC,AGXT2L1,AGXT2L1	1150,1150,1150,-111158,1150,1150
chr9:35543143-35544062	chr9	+	35543514	35544102	True	NM_001099951,NM_001135999	chr9,chr9	-,+	FAM166B,RUSC2	19852,-4947
chr14:98666878-98667116	chr14	+	98666929	98667105	True	NR_015430,NM_182560	chr14,chr14	-,+	C14orf64,C14orf177	-222468,510844
chr14:95235050-95235283	chr14	+	95235105	95235199	True	NR_015340,NM_173849	chr14,chr14	+,-	SERPINA13,GSC	-128094,1350
chrX:134936384-134936932	chrX	+	134936828	134936910	True	NM_018666,NM_001017436	chrX,chrX	+,-	SAGE1,CT45A4	38874,-93
chrX:134936384-134936932	chrX	-	134866038	134866120	False	NM_152582,NM_001017436	chrX,chrX	+,+	CT45A2,CT45A4	93,93
chr5:1226591-1226894	chr5	+	1226619	1226869	True	NM_182632,NM_001193376	chr5,chr5	+,-	SLC6A18,TERT	-1200,68343
chr3:178268947-178269782	chr3	+	178268988	178269680	True	NM_022470,NM_005832	chr3,chr3	-,+	ZMAT3,KCNMB2	520026,6937
chr22:21772533-21772769	chr22	+	21772564	21772810	True	NM_015094,NR_003700	chr22,chr22	+,-	HIC2,PI4KAP2	-923,99020
chr22:21772533-21772769	chr22	-	20426681	20426924	False	NR_003563,NR_026919	chr22,chr22	-,+	PI4KAP1,LOC150197	-27986,-232877
chr22:21772533-21772769	chr22	-	21870658	21870901	False	NR_003700,NM_003347	chr22,chr22	-,+	PI4KAP2,UBE2L3	930,51055
chr8:72975336-72977021	chr8	+	72975715	72977057	True	NM_007332,NR_033651	chr8,chr8	-,+	TRPA1,LOC100132891	10812,-219416
chrX:62647954-62648362	chrX	+	62647957	62648399	True	NM_001010888,NM_001012968	chrX,chrX	+,-	ZC3H12B,SPIN4	2060215,-76739
chr9:34329543-34329791	chr9	+	34329579	34329727	True	NM_147173,NM_147172,NM_194313,NM_001161	chr9,chr9,chr9,chr9	+,+,-,+	NUDT2,NUDT2,KIF24,NUDT2	-126,-126,-381,-126
chr19:53837559-53837955	chr19	+	53837574	53837812	True	NM_138374,NM_033341	chr19,chr19	+,-	ZNF845,BIRC8	-623,-42699
chr9:135904759-135905219	chr9	+	135904897	135905077	True	NM_001122823,NM_001162427,NM_012087	chr9,chr9,chr9	+,-,+	GTF3C5,TSC1,GTF3C5	984,-84877,984
chr7:2595515-2595891	chr7	+	2595518	2595608	True	NM_001100390,NM_152558,NM_152743	chr7,chr7,chr7	+,+,-	IQCE,IQCE,BRAT1	3023,3023,-126
chr9:124132518-124132770	chr9	+	124132570	124132708	True	NM_004099,NM_000177,NM_198194	chr9,chr9,chr9	-,+,-	STOM,GSN,STOM	-25,-70542,-25
chr2:217236756-217237026	chr2	+	217236803	217237031	True	NM_014140,NM_020814	chr2,chr2	+,-	SMARCAL1,MARCH4	40105,-53
chr9:72374999-72375236	chr9	+	72375058	72375210	True	NM_001099666,NM_001010940	chr9,chr9	-,+	PTAR1,C9orf135	-182,60520
chr2:46769203-46769426	chr2	+	46769350	46769477	True	NM_080653,NM_012249	chr2,chr2	-,+	ATP6V1E2,RHOQ	-22254,389
chr20:32891656-32892416	chr20	+	32891814	32892166	True	NM_001672,NM_000687,NM_001161766	chr20,chr20,chr20	+,-,-	ASIP,AHCY,AHCY	-43699,-599,7492
chr16:3074119-3074929	chr16	+	3074165	3074585	True	NM_001142350,NM_024339,NM_017885,NM_001002017,NM_001002018,NM_021195,NM_016639	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,-,-,-,-,+	THOC6,THOC6,HCFC1R1,HCFC1R1,HCFC1R1,CLDN6,TNFRSF12A	-184,-184,28,28,28,-5977,-3903
chr6:33421651-33421961	chr6	+	33421687	33421917	True	NM_152735,NM_015921	chr6,chr6	+,-	ZBTB9,CUTA	438,-35622
chr6:33421651-33421961	chr6_ssto_hap7	+	4901931	4902161	False	NM_001014840	chr6_ssto_hap7	-	CUTA	-35620
chr10:134260402-134260617	chr10	+	134260432	134260566	True	NM_173541,NM_173575	chr10,chr10	+,-	C10orf91,STK32C	-1769,-138955
chr11:119189412-119189910	chr11	+	119189452	119189832	True	NM_032015,NM_006500	chr11,chr11	+,-	RNF26,MCAM	15404,-1612
chr14:21572764-21573746	chr14	+	21572877	21573492	True	NM_016423,NM_001101672,NM_001146683,NM_001102454	chr14,chr14,chr14,chr14	-,-,+,-	ZNF219,ZNF219,C14orf176,ZNF219	-6069,-5704,-5833,-14
chr7:19748487-19748696	chr7	+	19748494	19748694	True	NM_001002926,NM_002214,NR_036101	chr7,chr7,chr7	-,+,-	TWISTNB,ITGB8,MIR3146	16,622030,-3435
chr17:21027119-21028254	chr17	+	21027496	21028302	True	NM_015276,NM_015510	chr17,chr17	-,+	USP22,DHRS7B	-81144,1955
chr22:20610900-20611154	chr22	+	20610922	20611174	True	NM_015672,NM_003426	chr22,chr22	-,+	RIMBP3,ZNF74	-149136,137305
chr22:20610900-20611154	chr22	+	25019527	25019775	False	NM_207644,NR_024494	chr22,chr22	-,+	C22orf36,BCRP3	-30492,9106
chr22:20610900-20611154	chr22	-	21567457	21567709	False	NR_024583,NR_002829	chr22,chr22	+,-	POM121L8P,P2RX6P	69004,-168919
chr22:20610900-20611154	chr22	-	18766346	18766598	False	NM_005675,NR_003267	chr22,chr22	+,-	DGCR6,GGT3P	127137,12926
chrX:154460930-154461556	chrX	+	154460929	154461577	True	NM_003372,NM_171998	chrX,chrX	+,-	VBP1,RAB39B	-16279,32325
chr11:111473915-111475382	chr11	+	111474146	111475419	True	NM_015191,NM_017589	chr11,chr11	+,-	SIK2,BTG4	-1028,-91082
chr7:142836698-142837957	chr7	+	142836705	142837876	True	NR_002140,NM_002652	chr7,chr7	-,+	OR6W1P,PIP	-75823,-7590
chr17:34139851-34141331	chr17	+	34140197	34140885	True	NM_001032278,NM_139215,NM_003487	chr17,chr17,chr17	-,+,+	MMP28,TAF15,TAF15	-17557,-3766,-3766
chr16:28227434-28227774	chr16	+	28227692	28227770	True	NM_015171,NM_001024401	chr16,chr16	-,+	XPO6,SBK1	-4502,76069
chr1:115054192-115054810	chr1	+	115054317	115054669	True	NM_003176,NM_015906,NM_033020	chr1,chr1,chr1	+,-,-	SYCP1,TRIM33,TRIM33	342785,-536,-536
chr3:58978756-58980593	chr3	+	58979051	58980625	True	NM_198463,NM_153331	chr3,chr3	-,+	C3orf67,KCTD6	55140,-495010
chr17:76922952-76924492	chr17	+	76923124	76924327	True	NM_003255,NM_030968	chr17,chr17	-,+	TIMP2,C1QTNF1	-1652,95923
chr7:134259597-134260534	chr7	+	134259608	134260496	True	NM_001628,NM_001080538	chr7,chr7	-,+	AKR1B1,AKR1B15	-115720,-25811
chr10:28963972-28964300	chr10	+	28964004	28964339	True	NR_033805,NM_012342	chr10,chr10	-,+	LOC220906,BAMBI	-142721,2084
chr1:39336835-39338478	chr1	+	39336883	39338478	True	NR_037633,NR_037632,NR_037637,NR_037636,NR_037635,NR_037634,NM_012333,NM_030772,NM_001136275	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,-,-,-,+	GJA9-MYCBP,MYCBP,GJA9-MYCBP,GJA9-MYCBP,GJA9-MYCBP,GJA9-MYCBP,MYCBP,GJA9,AKIRIN1	8870,622,8870,8870,8870,8870,622,8870,118437
chrX:152865251-152865623	chrX	+	152865273	152865577	True	NM_001130997,NM_152274,NM_001395	chrX,chrX,chrX	-,-,+	FAM58A,FAM58A,DUSP9	-641,-641,42319
chr21:40720298-40720563	chr21	+	40720330	40720544	True	NM_004627,NM_004965	chr21,chr21	+,-	WRB,HMGN1	31668,553
chr17:77773283-77773932	chr17	+	77773619	77773967	True	NM_005189,NM_020649	chr17,chr17	+,-	CBX2,CBX8	-21700,-2704
chr5:133966241-133967609	chr5	+	133966494	133967485	True	NM_021982,NM_016103,NM_001033503	chr5,chr5,chr5	+,-,-	SEC24A,SAR1B,SAR1B	16993,1098,1098
chr6:52860589-52860872	chr6	+	52860708	52860772	True	NM_001512,NM_033481	chr6,chr6	-,+	GSTA4,FBXO9	-530,69023
chr9:37900368-37901323	chr9	+	37900763	37900854	True	NM_024345,NM_033412,NR_024873,NR_024872	chr9,chr9,chr9,chr9	+,-,-,-	DCAF10,MCART1,MCART1,MCART1	-100034,3553,3553,3553
chr20:23383060-23384575	chr20	+	23383162	23384555	True	NM_138283,NM_022080	chr20,chr20	+,-	CSTL1,NAPB	35766,17651
chr3:48957741-48958680	chr3	+	48957740	48958727	True	NM_006321,NM_001123040	chr3,chr3	+,-	ARIH2,C3orf71	-1513,-922
chr1:173839533-173839881	chr1	+	173839543	173839869	True	NR_002746,NM_032522,NR_003944,NR_037605,NR_003942,NR_003943,NR_003940,NR_003941,NR_002750,NM_001122770,NR_002578,NR_002579,NR_003939,NR_003938	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,+,-,+,-,-,-,-,-,+,-,-,-,-	SNORD47,ZBTB37,SNORD78,LOC100506046,SNORD76,SNORD77,SNORD80,SNORD75,SNORD44,ZBTB37,GAS5,SNORD74,SNORD79,SNORD81	-5960,-2113,-4719,-7220,-3690,-4034,-5502,-3467,-4377,-2113,-2418,-2660,-4975,-6188
chr1:12815075-12815463	chr1	+	12815360	12815444	True	NM_001146344,NM_152290	chr1,chr1	-,+	PRAMEF11,C1orf158	75870,-9248
chr3:124935903-124936996	chr3	+	124936109	124936928	True	NM_024628,NR_033437,NM_001195483	chr3,chr3,chr3	-,+,-	SLC12A8,UMPS,SLC12A8	-4500,-486955,-5866
chrX:70443979-70444198	chrX	+	70443987	70444199	True	NM_000166,NM_001097642,NM_201599	chrX,chrX,chrX	+,+,-	GJB1,GJB1,ZMYM3	-982,-8976,29889
chr3:58486102-58486744	chr3	+	58486371	58486759	True	NM_001128214,NM_003500,NM_153331	chr3,chr3,chr3	+,-,+	KCTD6,ACOX2,KCTD6	-8606,36220,-2337
chr5:141391404-141392062	chr5	+	141391499	141392037	True	NM_005471,NM_183401	chr5,chr5	-,+	GNPDA1,RNF14	633,-42838
chr5:149669431-149669736	chr5	+	149669462	149669744	True	NM_001008657,NM_171825,NM_015981	chr5,chr5,chr5	+,-,-	TCOF1,CAMK2A,CAMK2A	67457,-59,-59
chr18:14392573-14392786	chr13	-	19240552	19240602	True	NR_027995,NR_026852	chr13,chr13	-,+	LOC284232,LOC348021	205557,341796
chr13:99634772-99635089	chr13	+	99634816	99634930	True	NM_001144072,NM_001130050,NM_001130048	chr13,chr13,chr13	+,-,-	UBAC2,DOCK9,DOCK9	217748,-4478,-4478
chr1:165539617-165541533	chr1	+	165539829	165541319	True	NR_026744,NM_001005214	chr1,chr1	-,+	LOC400794,LRRC52	10073,-26402
chr9:131789376-131789876	chr9	+	131789382	131789910	True	NM_020145,NM_032809	chr9,chr9	-,+	SH3GLB2,FAM73B	719,9342
chr16:86381927-86382930	chr16	+	86382058	86382770	True	NR_024406,NM_001451	chr16,chr16	-,+	LOC732275,FOXF1	-2773,161362
chr17:34320005-34320751	chr17	+	34320019	34320589	True	NR_027922,NR_027921,NM_002988,NM_032963,NM_032962,NM_032965	chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,-,-,-	CCL14-CCL15,CCL14-CCL15,CCL18,CCL14,CCL14,CCL15	8557,8557,71053,-6255,-6255,8557
chr8:145551382-145552565	chr8	+	145551391	145552572	True	NM_024531,NM_012079,NM_031309	chr8,chr8,chr8	+,-,-	GPR172A,DGAT1,SCRT1	29652,-824,7421
chr11:44118153-44119701	chr11	+	44118287	44119572	True	NM_021926,NM_001178083,NM_207122,NM_000401	chr11,chr11,chr11,chr11	-,+,+,+	ALX4,EXT2,EXT2,EXT2	212194,-1249,-1249,-601
chrX:135250337-135250588	chrX	+	135250410	135250636	True	NM_001159704,NM_001173517,NM_001167819	chrX,chrX,chrX	+,-,+	FHL1,MAP7D3,FHL1	818,83160,1159
chr20:1874177-1874394	chr20	+	1874185	1874407	True	NM_080792,NM_001190892,NM_001040023,NM_001040022	chr20,chr20,chr20,chr20	+,-,+,+	SIRPA,PDYN,SIRPA,SIRPA	1017,99095,1418,405
chr17:65361222-65362367	chr17	+	65361315	65362295	True	NM_002816,NM_012417,NM_174871	chr17,chr17,chr17	-,+,-	PSMD12,PITPNC1,PSMD12	476,11628,476
chr19:19173490-19174330	chr19	+	19173531	19174235	True	NM_001017392,NM_178526	chr19,chr19	-,+	SUGP2,SLC25A42	-29151,567
chr2:220082288-220082600	chr2	+	220082373	220082569	True	NM_138802,NM_005689	chr2,chr2	+,-	ZFAND2B,ABCB6	-10886,1203
chr19:4770562-4770762	chr19	+	4770679	4770803	True	NR_029607,NR_027148,NM_139159	chr19,chr19,chr19	+,+,-	MIR7-3,C19orf30,DPP9	-48,-1613,-46824
chr7:15542233-15544226	chr7	+	15542580	15544252	True	NM_001195280,NM_001004320	chr7,chr7	+,-	LOC100506049,AGMO	1022252,57445
chr16:53468753-53469099	chr16	+	53468755	53469121	True	NM_001012398,NM_005611	chr16,chr16	-,+	AKTIP,RBL2	68099,-455
chrX:62571312-62572502	chrX	+	62571326	62572447	True	NM_001010888,NM_001012968	chrX,chrX	+,-	ZC3H12B,SPIN4	2136167,-108
chr19:18449108-18449398	chr19	+	18449192	18449270	True	NM_017712,NM_012321	chr19,chr19	+,-	PGPEP1,LSM4	2137,-15191
chr10:88987043-88987333	chr10	+	88987064	88987246	True	NM_001099338,NR_024397	chr10,chr10	+,-	FAM22A,LOC728190	-1910,115119
chr10:88987043-88987333	chr10	+	81464974	81465024	False	NR_027512,NM_001098668	chr10,chr10	+,-	LOC650623,SFTPA2	-22294,-144811
chr10:88987043-88987333	chr10	+	89119283	89119465	False	NM_001009610,NR_024397	chr10,chr10	+,-	FAM22D,LOC728190	-1857,-16968
chr15:83621951-83622256	chr15	+	83621954	83622254	True	NM_031452,NM_004839,NM_199330,NM_199331,NM_199332	chr15,chr15,chr15,chr15,chr15	+,-,-,-,-	FAM103A1,HOMER2,HOMER2,HOMER2,HOMER2	32740,-481,-481,-481,-481
chr12:56369320-56369827	chr12	+	56369458	56369533	True	NM_001798,NM_002868,NM_001200053,NM_006928,NM_001200054,NM_052827	chr12,chr12,chr12,chr12,chr12,chr12	+,+,-,-,-,+	CDK2,RAB5B,PMEL,PMEL,PMEL,CDK2	-8960,-1654,-9612,-8962,-9612,-8960
chr13:44544898-44545200	chr13	+	44544927	44545191	True	NM_144974,NR_026955	chr13,chr13	-,+	CCDC122,NCRNA00284	-91101,51279
chr13:44544898-44545200	chr11	+	46400024	46401077	False	NM_001012333,NM_002391,NM_001012334,NM_000741	chr11,chr11,chr11,chr11	+,+,+,-	MDK,MDK,MDK,CHRM4	2225,2141,1540,7080
chr11:56950134-56951048	chr11	+	56950397	56951042	True	NM_001005210,NM_005161	chr11,chr11	+,-	LRRC55,APLNR	-1227,53935
chr12:52992580-52993022	chr12	+	52992580	52992878	True	NM_002284,NM_080747,NM_001146226,NM_001146225	chr12,chr12,chr12,chr12	+,-,-,-	KRT86,KRT72,KRT72,KRT72	-296982,2494,2494,2494
chr2:71563422-71563823	chr2	+	71563562	71563868	True	NM_020459,NM_001014972,NM_014497	chr2,chr2,chr2	-,+,+	PAIP2B,ZNF638,ZNF638	-109329,-4734,-4734
chr11:10316374-10317343	chr11	+	10316509	10317291	True	NM_030962,NM_001124	chr11,chr11	-,+	SBF2,ADM	-755,9350
chr20:3640821-3641159	chr20	+	3640982	3641083	True	NM_145762,NM_022139,NM_001197327	chr20,chr20,chr20	-,-,+	GFRA4,GFRA4,HSPA12B	3014,3014,72233
chr17:18854516-18854858	chr17	+	18854534	18854828	True	NM_001042450,NM_001039999,NM_152351	chr17,chr17,chr17	+,-,+	SLC5A10,FAM83G,SLC5A10	649,53282,649
chr20:60962407-60962743	chr20	+	60962639	60962791	True	NM_001024,NM_031215	chr20,chr20	+,-	RPS21,CABLES2	-569,19598
chr6:88182065-88182508	chr6	+	88182083	88182431	True	NM_006416,NM_020320,NM_001168398	chr6,chr6,chr6	+,-,+	SLC35A1,RARS2,SLC35A1	211,117354,211
chr22:38088083-38088926	chr22	+	38088464	38088916	True	NM_006498,NM_024313,NM_001039141	chr22,chr22,chr22	-,+,+	LGALS2,NOL12,TRIOBP	-112440,-6171,4078
chr16:68031418-68032136	chr16	+	68031568	68031936	True	NM_017803,NM_022355	chr16,chr16	+,-	DUS2L,DPEP2	25267,1478
chr20:47445812-47446635	chr20	+	47445842	47446477	True	NM_006420,NM_020820	chr20,chr20	+,-	ARFGEF2,PREX1	91797,-1422
chr22:41253099-41253393	chr22	+	41253151	41253411	True	NM_001204827,NM_022098,NM_145174,NM_003932	chr22,chr22,chr22,chr22	+,+,-,-	XPNPEP3,XPNPEP3,DNAJB7,ST13	-117,-117,4769,-464
chr10:38691042-38691382	chr10	+	38691237	38691391	True	NR_027269,NR_024497	chr10,chr10	-,+	SEPT7L,LOC399744	439,25682
chr2:231862902-231864174	chr2	+	231862951	231864214	True	NR_033879,NM_139073	chr2,chr2	-,+	LOC348761,SPATA3	-2204,-2163
chr6:106553144-106553459	chr6	+	106553144	106553384	True	NM_182907,NM_004849	chr6,chr6	+,-	PRDM1,ATG5	-6380,220361
chr19:18747408-18747617	chr19	+	18747526	18747588	True	NM_004750,NM_018316	chr19,chr19	-,+	CRLF1,KLHL26	-29866,249
chr4:138450002-138450863	chr4	+	138450106	138450844	True	NM_012118,NM_019035	chr4,chr4	+,-	CCRN4L,PCDH18	1486098,2835
chr15:37040645-37041125	chr15	+	37040655	37041150	True	NR_027320,NM_032499	chr15,chr15	-,+	CSNK1A1P1,C15orf41	69612,-107900
chrX:118927340-118927798	chrX	+	118927407	118927777	True	NM_001000,NR_002584,NM_001105576	chrX,chrX,chrX	-,-,+	RPL39,SNORA69,ANKRD58	-1801,-5960,-34883
chr15:54032340-54032595	chr15	+	54032342	54032475	True	NM_182758,NM_001080534	chr15,chr15	-,+	WDR72,UNC13C	19445,272625
chr11:788491-788954	chr11	+	788790	788954	True	NM_001004,NM_001191060,NM_024698,NM_001191061,NM_016564	chr11,chr11,chr11,chr11,chr11	+,-,-,-,-	RPLP2,SLC25A22,SLC25A22,SLC25A22,CEND1	20981,9091,7359,9365,1222
chr1:111218080-111219149	chr1	+	111218141	111219043	True	NM_002232,NM_001040033,NR_003599	chr1,chr1,chr1	-,+,+	KCNA3,CD53,CYMP	-486,194777,-194804
chr15:78218981-78219421	chr15	+	78218983	78219314	True	NM_001101404,NR_027024	chr15,chr15	+,-	SH2D7,LOC645752	165612,-75
chr9:21995958-21996214	chr9	+	21995991	21996247	True	NR_003529,NM_058195	chr9,chr9	+,-	CDKN2B-AS1,CDKN2A	-1252,-1501
chr12:52828103-52828971	chr12	+	52828329	52829007	True	NM_004693,NM_002284	chr12,chr12	-,+	KRT75,KRT86	-219,-132732
chr6:147828604-147828804	chr6	+	147828694	147828804	True	NM_001030060,NR_034115	chr6,chr6	+,-	SAMD5,LOC729178	1023,-302944
chr6:44129027-44129862	chr6	+	44129236	44129672	True	NM_007058,NM_032111	chr6,chr6	+,-	CAPN11,MRPL14	-2739,-34045
chr19:41598188-41599203	chr19	+	41598299	41599185	True	NM_030589,NM_000766	chr19,chr19	-,+	CYP2A7,CYP2A13	-209642,-3982
chr17:21156611-21156863	chr17	+	21156679	21156855	True	NM_152914,NM_145109	chr17,chr17	-,+	C17orf103,MAP2K3	-101,31112
chr7:158496037-158497162	chr7	+	158496109	158496529	True	NM_017760,NM_018051	chr7,chr7	-,+	NCAPG2,WDR60	1041,152739
chrX:112052363-112053387	chrX	+	112052400	112053311	True	NM_001004308,NM_001113490	chrX,chrX	+,-	ZCCHC16,AMOT	-726203,13100
chr11:3509133-3509719	chr11	+	3509333	3509519	True	NM_007152,NR_024248	chr11,chr11	-,+	ZNF195,LOC650368	-108885,-107196
chr4:123535688-123536396	chr4	+	123535951	123536397	True	NM_001178007,NM_021803	chr4,chr4	+,-	BBS12,IL21	117459,5864
chrX:40691057-40691338	chrX	+	40691107	40691365	True	NR_027761,NM_001195522	chrX,chrX	-,+	LOC100132831,LOC347411	1134,-208340
chr22:17563895-17564884	chr22	+	17564130	17564742	True	NM_031890,NM_014339	chr22,chr22	-,+	CECR6,IL17RA	37521,1108
chr1:46939880-46940418	chr1	+	46940131	46940409	True	NM_147192,NM_001097611	chr1,chr1	+,-	DMBX1,KNCN	32258,76528
chr22:35867447-35868486	chr22	+	35867460	35868486	True	NM_005368,NM_014310	chr22,chr22	-,+	MB,RASD2	144948,68865
chr2:5830535-5831019	chr2	+	5830535	5831051	True	NR_034134,NM_003108	chr2,chr2	-,+	LOC727982,SOX11	-1126723,1747
chr1:41487368-41488299	chr1	+	41487384	41488113	True	NR_037868,NM_144990,NM_001168247	chr1,chr1,chr1	+,-,-	LOC100507178,SLFNL1,SLFNL1	-7173,43,13
chr8:143781150-143781583	chr8	+	143781198	143781456	True	NM_017527,NM_003724,NM_001160354,NM_001160355	chr8,chr8,chr8,chr8	+,-,+,+	LY6K,JRK,LY6K,LY6K	72,-29797,72,72
chr19:17931015-17931713	chr19	+	17931161	17931587	True	NM_014256,NM_005543	chr19,chr19	+,-	B3GNT3,INSL3	-25302,783
chr4:6577432-6578272	chr4	+	6577501	6577819	True	NM_020416,NM_015274	chr4,chr4	-,+	PPP2R2C,MAN2B2	-103175,-650
chrY:9572429-9573038	chrY	+	9572467	9573081	True	NR_003590,NR_003588,NR_001536	chrY,chrY,chrY	+,-,+	TTTY2B,TTTY21B,TTTY2	813,-13562,813
chrY:9572429-9573038	chrY	-	6297298	6297912	False	NR_001535,NR_003590,NR_001536	chrY,chrY,chrY	+,-,-	TTTY21,TTTY2B,TTTY2	13562,-813,-813
chr1:145823237-145823778	chr1	+	145823300	145823369	True	NM_001097612,NM_001097613,NM_001097616,NR_036541	chr1,chr1,chr1,chr1	-,-,+,-	GPR89A,GPR89A,GPR89C,GPR89A	3791,3791,60498,3791
chr1:44447505-44449071	chr1	+	44447702	44448946	True	NM_001005417,NM_003780,NM_004047,NM_152499,NM_001039457,NM_006934	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-	B4GALT2,B4GALT2,ATP6V0B,CCDC24,ATP6V0B,SLC6A9	-1570,-2887,-7151,8333,-7151,34101
chr20:47837267-47837589	chr20	+	47837395	47837501	True	NM_017454,NM_017895	chr20,chr20	-,+	STAU1,DDX27	-32491,-1614
chr1:62782791-62783811	chr1	+	62782845	62783791	True	NM_181712,NM_001017415	chr1,chr1	-,+	KANK4,USP1	1342,118183
chr15:45668945-45670268	chr15	+	45668974	45670068	True	NM_001482,NR_033252	chr15,chr15	-,+	GATM,LOC145663	962,829
chr17:6861245-6861555	chr17	+	6861336	6861463	True	NM_000697,NR_029712	chr17,chr17	+,-	ALOX12,MIR195	37920,59608
chr2:238396723-238396986	chr2	+	238396724	238396984	True	NM_001042467,NM_024101,NM_057165	chr2,chr2,chr2	+,+,-	MLPH,MLPH,COL6A3	-897,-897,-73874
chr2:208634915-208635272	chr2	+	208634936	208635184	True	NM_152523,NM_003468	chr2,chr2	+,-	CCNYL1,FZD5	-58723,-793
chr19:55580563-55580922	chr19	+	55580721	55580919	True	NR_027382,NM_001145971,NR_027381,NM_138412,NM_133180	chr19,chr19,chr19,chr19,chr19	-,-,-,-,+	RDH13,RDH13,RDH13,RDH13,EPS8L1	-6136,-6136,-6136,45,6301
chr6:13524233-13524777	chr6	+	13524331	13524800	True	NM_018988,NM_031244	chr6,chr6	-,+	GFOD1,SIRT5	-36544,49991
chr8:9411707-9412322	chr8	+	9411706	9412218	True	NM_003747,NR_024281	chr8,chr8	+,-	TNKS,LOC157627	1226,348671
chr11:83392642-83393295	chr11	+	83392646	83393343	True	NM_182603,NM_001142702	chr11,chr11	+,-	ANKRD42,DLG2	-487406,176
chr1:39958833-39959371	chr1	+	39958946	39959410	True	NR_003929,NM_181809	chr1,chr1	-,+	PPIEL,BMP8A	66010,-1679
chr1:39958833-39959371	chr1	-	40252825	40252875	False	NM_001720,NM_001195007	chr1,chr1	-,+	BMP8B,PPIE	1708,-48359
chr15:32726974-32727212	chr15	+	32727091	32727171	True	NR_027470,NR_026859,NR_026858,NM_199357	chr15,chr15,chr15,chr15	-,-,-,+	FAM7A2,FAM7A3,FAM7A1,ARHGAP11A	129,-26,129,180519
chr15:32726974-32727212	chr15	-	30395828	30395908	False	NR_026859,NM_175610	chr15,chr15	+,-	FAM7A3,TJP1	26,-281122
chr15:32726974-32727212	chr15	+	30685757	30685837	False	NM_148911,NM_139320,NR_026858	chr15,chr15,chr15	-,-,+	CHRFAM7A,CHRFAM7A,FAM7A1	77,77,178920
chr15:32726974-32727212	chr15	-	30864836	30864916	False	NR_027470,NM_148911,NR_026858	chr15,chr15,chr15	+,-,+	FAM7A2,CHRFAM7A,FAM7A1	-129,-178972,-129
chr1:206223329-206223536	chr1	+	206223333	206223531	True	NM_000707,NM_001007544	chr1,chr1	+,-	AVPR1B,C1orf186	751,65166
chr20:4983135-4983749	chr20	+	4983141	4983683	True	NM_005116,NR_028370,NM_203327	chr20,chr20,chr20	-,+,-	SLC23A2,PCNA-AS1,SLC23A2	-996,116548,7312
chr1:229570617-229571035	chr1	+	229570622	229571037	True	NM_006542,NM_001100	chr1,chr1	+,-	SPHAR,ACTA1	-130544,-779
chr12:53902546-53903380	chr12	+	53902716	53903244	True	NM_003717,NM_004178,NM_134323,NM_001193511,NM_134324,NM_006301	chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,-,+,-	NPFF,TARBP2,TARBP2,MAP3K12,TARBP2,MAP3K12	-1294,-8063,-8063,-9272,-7391,-9272
chr6:159073732-159074258	chr6	+	159073867	159074257	True	NM_006519,NM_001009991	chr6,chr6	-,+	DYNLT1,SYTL3	-8063,-2872
chr10:103889451-103890096	chr10	+	103889651	103889850	True	NM_001113407,NM_015062	chr10,chr10	-,+	LDB1,PPRC1	-9441,2936
chr1:211613111-211614765	chr1	+	211613351	211614442	True	NM_001164688,NR_026761	chr1,chr1	-,+	RD3,C1orf97	51874,-57305
chr2:23607005-23607690	chr2	+	23607074	23607628	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	542356,669
chr6:44060306-44061173	chr6	+	44060327	44060876	True	NM_018426,NM_032111	chr6,chr6	+,-	TMEM63B,MRPL14	34499,34372
chr1:110579535-110581368	chr1	+	110579955	110581392	True	NM_033088,NM_006492	chr1,chr1	+,-	FAM40A,ALX3	-2766,31980
chr2:223916918-223917334	chr2	+	223916923	223917360	True	NM_080671,NM_005687	chr2,chr2	+,-	KCNE4,FARSB	-112,-396096
chr11:19151489-19152551	chr11	+	19151642	19152351	True	NM_054030,NM_019028	chr11,chr11	-,+	MRGPRX2,ZDHHC13	-69414,-13009
chr10:31254671-31255319	chr10	+	31254737	31255022	True	NM_001143769,NM_001174093	chr10,chr10	-,+	ZNF438,ZEB1	33479,353078
chr12:113657213-113657704	chr12	+	113657213	113657465	True	NM_138451,NM_017901,NM_001143819	chr12,chr12,chr12	-,+,+	IQCD,TPCN1,TPCN1	1475,1794,1794
chr1:93298279-93298579	chr1	+	93298372	93298600	True	NR_000006,NR_002444,NM_000969,NM_005665	chr1,chr1,chr1,chr1	+,+,+,-	SNORD21,SNORA66,RPL5,EVI5	4245,7675,-830,-40411
chr14:62584390-62585758	chr14	+	62584493	62585755	True	NM_001017970,NR_015358	chr14,chr14	-,+	TMEM30B,FLJ43390	-835963,-469
chr17:48074580-48075343	chr17	+	48074744	48075231	True	NM_005220,NM_001934	chr17,chr17	-,+	DLX3,DLX4	-2156,-24665
chr10:118998923-119000451	chr10	+	118999033	119000308	True	NR_037436,NM_003054	chr10,chr10	-,+	MIR3663,SLC18A2	-71748,275
chr19:11349118-11350141	chr19	+	11349191	11350181	True	NM_020812,NM_018687	chr19,chr19	-,+	DOCK6,LOC55908	23026,113
chr8:146053608-146053870	chr8	+	146053641	146053901	True	NM_001081004,NM_003416	chr8,chr8	-,+	COMMD5,ZNF7	24600,-793
chr12:57622273-57622722	chr12	+	57622510	57622766	True	NM_005412,NM_020142,NR_029415,NR_029416,NR_029417,NM_001166358,NM_001166359,NM_001166356,NM_001166357	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,-,+,+,+,+,+,+,+	SHMT2,NDUFA4L2,SHMT2,SHMT2,SHMT2,SHMT2,SHMT2,SHMT2,SHMT2	589,11759,1344,1061,589,1061,1344,589,1376
chrX:47346041-47347657	chrX	+	47346364	47347493	True	NM_001654,NM_153380,NM_007130	chrX,chrX,chrX	+,-,-	ARAF,ZNF41,ZNF41	73022,-4019,-4019
chr12:71007024-71007462	chr12	+	71007065	71007501	True	NM_002837,NM_014505	chr12,chr12	-,+	PTPRB,KCNMB4	-3441,-247054
chr7:148843196-148843496	chr7	+	148843317	148843544	True	NM_170686,NM_001001661	chr7,chr7	+,-	ZNF398,ZNF425	1015,-19879
chr15:32759278-32760262	chr15	+	32759287	32760291	True	NR_027470,NM_199357	chr15,chr15	-,+	FAM7A2,ARHGAP11A	-32037,147399
chr15:32759278-32760262	chr15	-	32873180	32874187	False	NM_199357,NR_036650	chr15,chr15	+,-	ARHGAP11A,LOC100288615	33503,-47238
chr15:32759278-32760262	chr15	+	28969158	28969215	False	NR_033351,NR_026589	chr15,chr15	-,+	GOLGA8F,WHAMML2	-191015,13513
chr15:32759278-32760262	chr15	+	30717907	30718910	False	NM_148911,NR_026858	chr15,chr15	-,+	CHRFAM7A,FAM7A1	-32043,145847
chr15:32759278-32760262	chr15	-	30831731	30832574	False	NM_148911,NR_026858	chr15,chr15	-,+	CHRFAM7A,FAM7A1	-145867,32183
chr9:136399069-136399389	chr9	+	136399177	136399437	True	NM_014694,NM_001080483,NM_001145320	chr9,chr9,chr9	+,-,+	ADAMTSL2,TMEM8C,ADAMTSL2	537,-9109,-1942
chr7:105171288-105171655	chr7	+	105171484	105171563	True	NM_021930,NM_019042	chr7,chr7	+,-	RINT1,PUS7	968,-8799
chr4:6575492-6576296	chr4	+	6575503	6576081	True	NM_020416,NM_015274	chr4,chr4	-,+	PPP2R2C,MAN2B2	-101177,820
chr15:43908178-43908878	chr15	+	43908461	43908877	True	NM_020990,NM_153700	chr15,chr15	+,-	CKMT1B,STRC	-23260,2171
chr15:43908178-43908878	chr15	+	44007923	44008339	False	NM_001015001,NR_002318	chr15,chr15	+,-	CKMT1A,CATSPER2P1	-22890,30207
chr7:119522705-119523234	chr7	+	119522962	119523266	True	NM_012281,NM_012338	chr7,chr7	+,-	KCND2,TSPAN12	390455,974975
chr13:98084984-98085201	chr13	+	98084988	98085154	True	NM_080818,NM_021033	chr13,chr13	-,+	OXGR1,RAP2A	-438384,1320
chr5:40835512-40835738	chr5	+	40835523	40835679	True	NM_032587,NR_002583,NR_037665,NM_000997	chr5,chr5,chr5,chr5	+,-,-,-	CARD6,SNORD72,LOC100506548,RPL37	5730,-2686,-6279,-136
chr8:96147722-96148899	chr8	+	96147948	96148915	True	NR_037484,NM_024613	chr8,chr8	-,+	MIR3150B,PLEKHF2	-62724,-2061
chr11:66823023-66823464	chr11	+	66823081	66823513	True	NM_014578,NM_001040716	chr11,chr11	+,-	RHOD,PC	775,-97234
chr19:17797675-17798255	chr19	+	17797704	17798257	True	NM_001080421,NM_018174	chr19,chr19	-,+	UNC13A,MAP1S	801,32045
chr9:37465962-37466167	chr9	+	37466014	37466117	True	NM_022490,NM_014872	chr9,chr9	+,-	POLR1E,ZBTB5	19827,-607
chr5:145328295-145329862	chr5	+	145328536	145329892	True	NM_152550,NM_001080516	chr5,chr5	+,-	SH3RF2,GRXCR2	-12461,-76005
chr3:88364660-88365938	chr3	+	88364842	88365952	True	NM_173824,NM_001195308	chr3,chr3	+,-	C3orf38,CGGBP1	-166009,-165826
chr12:66694373-66695071	chr12	+	66694693	66694980	True	NM_016056,NM_033647	chr12,chr12	-,+	TMBIM4,HELB	-130886,1375
chr5:85912085-85913027	chr5	+	85912184	85913060	True	NR_036243,NM_001867,NR_037402	chr5,chr5,chr5	-,+,+	MIR4280,COX7C,MIR3607	497761,723,3253
chr11:65028138-65029181	chr11	+	65028630	65029230	True	NM_002689,NM_001077241	chr11,chr11	+,-	POLA2,SLC25A45	201,120962
chr12:54069188-54069668	chr12	+	54069189	54069707	True	NM_001002031,NM_005176,NM_134324	chr12,chr12,chr12	-,-,+	ATP5G2,ATP5G2,TARBP2	855,452,-173863
chr2:25475038-25475294	chr2	+	25475083	25475264	True	NM_153759,NM_014971	chr2,chr2	-,+	DNMT3A,EFR3B	-34,-210161
chr11:124797641-124798673	chr11	+	124797819	124798699	True	NM_152722,NM_001037558	chr11,chr11	-,+	HEPACAM,HEPN1	7659,-8742
chr3:195164027-195164907	chr3	+	195164232	195164946	True	NM_012287,NR_003265	chr3,chr3	-,+	ACAP2,SDHAP2	-415,219963
chr6:32561298-32562498	chr6	+	32561384	32561846	True	NM_002124,NM_002122	chr6,chr6	-,+	HLA-DRB1,HLA-DQA1	-3822,43336
chr6:55431339-55432699	chr6	+	55431338	55432730	True	NM_207410,NM_001042406	chr6,chr6	+,-	GFRAL,HMGCLL1	-239122,11332
chr13:25561098-25562311	chr13	+	25561272	25562298	True	NR_026730,NM_030979	chr13,chr13	-,+	TPTE2P1,PABPC3	-18665,107977
chr19:58177844-58178105	chr19	+	58177844	58177917	True	NM_152677,NM_001085384	chr19,chr19	+,-	ZSCAN4,ZNF154	2385,42715
chr10:15136608-15138203	chr10	+	15136607	15137956	True	NM_183005,NM_001097590,NM_006414,NM_001039844,NM_153244	chr10,chr10,chr10,chr10,chr10	+,+,+,-,-	RPP38,RPP38,RPP38,ACBD7,C10orf111	1225,1225,1225,-5832,1420
chr1:153367184-153367406	chr1	+	153367223	153367433	True	NM_176823,NM_002964	chr1,chr1	+,-	S100A7A,S100A8	21566,-3559
chr9:86436758-86438412	chr9	+	86437010	86438223	True	NM_025211,NM_001135953,NM_024945	chr9,chr9,chr9	-,-,+	GKAP1,GKAP1,RMI1	-4258,-4258,157413
chr1:106432056-106433992	chr1	+	106432445	106434034	True	NM_018137,NM_001079874	chr1,chr1	+,-	PRMT6,VAV3	1165232,1797144
chr2:48804047-48804441	chr2	+	48804288	48804436	True	NM_001198594,NM_172311,NM_000233	chr2,chr2,chr2	+,+,-	STON1-GTF2A1L,STON1-GTF2A1L,LHCGR	3289,-8185,178500
chr3:128444367-128444908	chr3	+	128444367	128444919	True	NM_002950,NM_004637	chr3,chr3	-,+	RPN1,RAB7A	-74648,59
chr13:99172592-99173327	chr13	+	99172686	99173366	True	NM_003576,NR_036129	chr13,chr13	-,+	STK24,MIR3170	1025,-311959
chrX:10639590-10641392	chrX	+	10639755	10641368	True	NM_001122608,NM_001098624	chrX,chrX	+,-	HCCS,MID1	488037,4472
chr16:70100224-70100770	chr16	+	70100258	70100815	True	NR_036265,NR_003610	chr16,chr16	+,-	MIR1972-2,PDXDC2P	-36060,-407
chr16:70100224-70100770	chr16	-	15067928	15068485	False	NM_015027,NM_173474	chr16,chr16	+,-	PDXDC1,NTAN1	347,81398
chr6:29423507-29424019	chr6_mcf_hap5	+	726847	726915	False	NM_030883,NM_013937	chr6_mcf_hap5,chr6_mcf_hap5	+,-	OR2H1,OR11A1	2496,-28162
chr6:29423507-29424019	chr6_dbb_hap3	+	726997	727065	False	NM_030883,NM_013937	chr6_dbb_hap3,chr6_dbb_hap3	+,-	OR2H1,OR11A1	2495,-28152
chr6:29423507-29424019	chr6	+	29423666	29423734	True	NM_030883,NM_013937	chr6,chr6	+,-	OR2H1,OR11A1	2495,-28157
chr6:29423507-29424019	chr6_ssto_hap7	+	764200	764268	False	NM_030883,NM_013937	chr6_ssto_hap7,chr6_ssto_hap7	+,-	OR2H1,OR11A1	2495,-28159
chr6:29423507-29424019	chr6_cox_hap2	+	942448	942516	False	NM_030883,NM_013937	chr6_cox_hap2,chr6_cox_hap2	+,-	OR2H1,OR11A1	2495,-28161
chr4:78079817-78080101	chr4	+	78079891	78080022	True	NM_004354,NM_006835	chr4,chr4	+,-	CCNG2,CCNI	-1590,-82766
chr2:180703704-180704928	chr2	+	180703820	180704843	True	NR_031659,NM_182678	chr2,chr2	-,+	MIR1258,UBE2E3	20842,1140268
chr3:50196133-50197065	chr3	+	50196141	50196961	True	NM_004186,NM_006764	chr3,chr3	+,-	SEMA3F,IFRD2	-3344,133115
chr12:69325608-69326329	chr12	+	69325615	69326357	True	NM_001005502,NM_198320,NM_002392	chr12,chr12,chr12	-,-,+	CPM,CPM,MDM2	672,672,-123702
chr5:142063308-142064392	chr5	+	142063690	142064238	True	NM_001135608,NM_000800,NM_033136	chr5,chr5,chr5	+,-,-	ARHGAP26,FGF1,FGF1	86053,1465,1864
chr1:153607619-153607930	chr1	+	153607648	153607984	True	NM_015607,NM_001024211,NM_001024212,NM_001024213,NM_006271,NM_001024210,NM_005979	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,-,+,-,-	CHTOP,S100A13,S100A13,S100A13,S100A1,S100A13,S100A13	-1174,-7531,-7904,-8124,-6826,-1080,-6933
chr9:139929157-139929623	chr9	+	139929163	139929653	True	NM_004479,NM_001606,NM_212533,NM_207511	chr9,chr9,chr9,chr9	-,-,-,+	FUT7,ABCA2,ABCA2,C9orf139	-1871,-6423,-5789,-7298
chr6:37321697-37321923	chr6	+	37321723	37321863	True	NM_183078,NM_001162900,NM_003958	chr6,chr6,chr6	+,-,+	RNF8,TMEM217,RNF8	-26,-95792,-26
chrX:103357953-103359083	chrX	+	103358218	103359036	True	NM_001143978,NR_031657,NR_026694	chrX,chrX,chrX	+,-,+	ZCCHC18,MIR1256,ZCCHC18	-1162,-12846,-1162
chr4:4145600-4146781	chr7	+	6895819	6895869	True	NM_198097,NM_173565	chr7,chr7	-,+	C7orf28B,RSPH10B	-29893,-102130
chr7:44246056-44246269	chr7	+	44246093	44246269	True	NM_006555,NM_000162	chr7,chr7	+,-	YKT6,GCK	-5566,-17071
chr8:87523557-87525526	chr8	+	87523716	87524928	True	NM_003909,NM_016033	chr8,chr8	+,-	CPNE3,FAM82B	1727,-2707
chr7:150676804-150677043	chr7	+	150676887	150677037	True	NM_000238,NM_172056,NM_000603	chr7,chr7,chr7	-,-,+	KCNH2,KCNH2,NOS3	-1485,-1485,11106
chr12:54361103-54361367	chr12	+	54361215	54361348	True	NM_014212,NR_003716	chr12,chr12	+,-	HOXC11,HOTAIR	5561,1218
chr9:91795024-91795329	chr9	+	91795053	91795315	True	NM_016848,NM_001827	chr9,chr9	-,+	SHC3,CKS2	-1371,130797
chr5:150157990-150158271	chr5	+	150157996	150158166	True	NM_032947,NM_016221	chr5,chr5	+,-	C5orf62,DCTN4	-539,-19339
chr15:78795948-78796659	chr15	+	78796082	78796521	True	NM_001083612,NM_001166694,NM_001013619	chr15,chr15,chr15	+,-,+	AGPHD1,CHRNA3,AGPHD1	3384,117171,3384
chr4:36202170-36202402	chr4	+	36202169	36202409	True	NM_015230,NM_001136536	chr4,chr4	-,+	ARAP2,DTHD1	43631,80834
chr12:2166684-2166983	chr12	+	2166689	2166999	True	NM_001129834,NM_001129835,NM_001129836,NM_001129837,NM_001129830,NM_001129831,NM_001129832,NM_001129833,NM_001129838,NM_001129839,NM_199460,NM_001129841,NM_001129840,NM_001129843,NM_001129842,NM_001129844,NM_001129846,NM_001129827,NM_152640,NM_001129829,NM_000719,NM_001167623,NM_001167625,NM_001167624	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,-,+,+,+,+,+	CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,DCP1B,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C	-4324,-4324,-4324,-4324,-4324,-4324,-4324,-4324,-4324,-4324,-4324,-4324,-4324,-4324,-4324,-4324,-4324,-4324,-53012,-4324,-4324,-4324,-4324,-4324
chr18:21270326-21270543	chr18	+	21270325	21270531	True	NM_001127717,NM_173505,NM_198129	chr18,chr18,chr18	+,-,+	LAMA3,ANKRD29,LAMA3	-814,-27476,-814
chr16:23690654-23691066	chr16	+	23690784	23690926	True	NM_005030,NM_033266	chr16,chr16	+,-	PLK1,ERN2	-634,33945
chr20:46027731-46028624	chr20	+	46027763	46028547	True	NM_183048,NR_024594	chr20,chr20	-,+	ZMYND8,LOC100131496	-42289,-80572
chr7:63589365-63590919	chr7	+	63589680	63590638	True	NM_001159524,NM_178558	chr7,chr7	+,-	ZNF735,ZNF680	76942,432917
chr10:102672502-102672711	chr10	+	102672592	102672750	True	NM_001136123,NR_024245,NM_018121,NM_176792	chr10,chr10,chr10,chr10	+,+,+,-	FAM178A,FAM178A,FAM178A,MRPL43	-317,-317,-317,74572
chr5:134240164-134240437	chr5	+	134240171	134240285	True	NM_032151,NM_002653	chr5,chr5	+,-	PCBD2,PITX1	524,129729
chr8:66938660-66939115	chr8	+	66938659	66939151	True	NM_000756,NM_033105	chr8,chr8	-,+	CRH,DNAJC5B	151745,-4923
chr15:32323080-32324639	chr15	+	32323117	32324579	True	NM_001190455,NM_000746,NM_130901	chr15,chr15,chr15	+,+,-	CHRNA7,CHRNA7,OTUD7A	-477,-477,-375575
chr9:131551320-131552255	chr9	+	131551615	131552243	True	NM_018201,NM_006336	chr9,chr9	+,-	TBC1D13,ZER1	-2169,-17417
chr7:95934287-95935708	chr7	+	95934312	95935692	True	NM_004411,NM_001160210	chr7,chr7	+,-	DYNC1I1,SLC25A13	-532545,15817
chr2:62942340-62943334	chr2	+	62942731	62943269	True	NM_198276,NM_001142616,NM_001142614,NM_015252	chr2,chr2,chr2,chr2	-,+,+,+	TMEM17,EHBP1,EHBP1,EHBP1	-209127,-9788,-8757,-9788
chr19:51487434-51487742	chr19	+	51487455	51487519	True	NM_005046,NM_005551,NM_139277	chr19,chr19,chr19	-,+,-	KLK7,KLK2,KLK7	-305,-110817,-384
chr1:1408678-1409300	chr1	+	1409189	1409287	True	NR_026871,NM_031921	chr1,chr1	-,+	LOC441869,ATAD3B	-52539,-2084
chr2:96874882-96875480	chr2	+	96874955	96875529	True	NM_020151,NM_001037228	chr2,chr2	-,+	STARD7,LOC285033	-382,30447
chr1:155293386-155293614	chr1	+	155293563	155293625	True	NM_001105205,NM_001105204,NM_014328,NM_001105203,NM_001039517	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	RUSC1,RUSC1,RUSC1,RUSC1,C1orf104	102,-2974,592,-2974,363
chr6:88765611-88765994	chr6	+	88765737	88765801	True	NM_033181,NM_030960	chr6,chr6	-,+	CNR1,SPACA1	89305,-8288
chr8:37358547-37359737	chr8	+	37358618	37359748	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	193552,245866
chr4:70498695-70499679	chr4	+	70498816	70499378	True	NM_001105677,NM_001025104	chr4,chr4	-,+	UGT2A2,CSN1S1	6024,297420
chr22:50351670-50351974	chr22	+	50351749	50351973	True	NM_024105,NM_001001852	chr22,chr22	-,+	ALG12,PIM3	-39643,2169
chr20:62292230-62292791	chr20	+	62292270	62292790	True	NR_037882,NM_016434,NM_015894,NM_032957	chr20,chr20,chr20,chr20	+,+,-,+	RTEL1-TNFRSF6B,RTEL1,STMN3,RTEL1	-3158,-3158,-7490,-3158
chr2:233793919-233795120	chr2	+	233793962	233794860	True	NM_001114090,NM_206895	chr2,chr2	-,+	NGEF,C2orf82	-1101,-59019
chr6:148887999-148889169	chr6	+	148888017	148888855	True	NM_207360,NM_005715	chr6,chr6	-,+	ZC3H12D,UST	917343,179415
chr11:3643484-3644906	chr11	+	3643568	3644510	True	NM_053017,NR_002720	chr11,chr11	-,+	ART5,TRPC2	19033,3203
chr8:110691464-110693114	chr8	+	110691869	110693150	True	NM_001099746,NM_001099745,NM_004215	chr8,chr8,chr8	-,-,+	SYBU,SYBU,EBAG9	135,135,-139617
chr2:3703789-3704745	chr2	+	3703802	3704708	True	NM_002936,NM_018436	chr2,chr2	-,+	RNASEH1,ALLC	-97862,1077
chr22:36112962-36113373	chr22	+	36112992	36113150	True	NM_030642,NM_203377	chr22,chr22	+,-	APOL5,MB	768,-93591
chr6:25137354-25137850	chr6	+	25137359	25137890	True	NR_002174,NM_001173977,NR_027626	chr6,chr6,chr6	-,+,-	CMAH,LRRC16A,CMAH	211,141765,780
chr7:149322906-149323836	chr7	+	149323001	149323873	True	NM_032534,NR_027788,NR_027789	chr7,chr7,chr7	+,-,-	KRBA1,ZNF767,ZNF767	88274,-1120,-1120
chr7:24664512-24665199	chr7	+	24664558	24665209	True	NM_016447,NM_001127453	chr7,chr7	+,-	MPP6,DFNA5	-51534,131924
chr3:105587662-105587916	chr3	+	105587666	105587782	True	NM_170662,NM_001627	chr3,chr3	-,+	CBLB,ALCAM	155,-502004
chr12:24741200-24742226	chr12	+	24741315	24741895	True	NR_030625,NR_029451	chr12,chr12	+,-	MIR920,C12orf67	-376011,-4213
chr6:119256387-119257401	chr6	+	119256436	119257010	True	NM_153255,NM_017696,NM_014034	chr6,chr6,chr6	-,-,+	MCM9,MCM9,ASF1A	-109,-3533,-41246
chr3:14712442-14713190	chr3	+	14712693	14713219	True	NM_001184957,NM_001080423,NM_001184958,NM_032137	chr3,chr3,chr3,chr3	+,-,+,+	C3orf20,GRIP2,C3orf20,C3orf20	3386,-129105,3386,3386
chr4:141073556-141074092	chr4	+	141073807	141074037	True	NM_018717,NM_032547	chr4,chr4	-,+	MAML3,SCOC	1246,104402
chr11:47430321-47430810	chr11	+	47430577	47430811	True	NM_002804,NM_001128225,NM_152264	chr11,chr11,chr11	-,+,+	PSMC3,SLC39A13,SLC39A13	17263,-582,-582
chr1:17446716-17447568	chr1	+	17446758	17447616	True	NM_007365,NM_013358	chr1,chr1	-,+	PADI2,PADI1	-810,84004
chr1:200625049-200626097	chr1	+	200625463	200626105	True	NM_203459,NM_001031725	chr1,chr1	+,-	CAMSAP1L1,DDX59	82580,13075
chr17:72890516-72891421	chr17	+	72890750	72891284	True	NM_178128,NM_178160	chr17,chr17	-,+	FADS6,OTOP2	-1045,29085
chr19:45738475-45738714	chr19	+	45738625	45738753	True	NM_001199867,NM_138568	chr19,chr19	+,-	MARK4,EXOC3L2	15762,-1156
chr5:14577740-14579326	chr5	+	14577792	14578927	True	NM_019018,NR_037899	chr5,chr5	+,-	FAM105A,LOC100128508	2963,198265
chr3:167814003-167814228	chr3	+	167814066	167814266	True	NM_014498,NR_021485	chr3,chr3	-,+	GOLIM4,EGFEM1P	-649,153043
chr2:217273739-217275130	chr2	+	217273804	217274769	True	NM_014140,NM_020814,NM_001127207	chr2,chr2,chr2	+,-,+	SMARCAL1,MARCH4,SMARCAL1	2367,-37054,2703
chr8:67626093-67627583	chr8	+	67626227	67627278	True	NM_001033578,NM_025054	chr8,chr8	+,-	SGK3,VCPIP1	-1625,-46775
chr1:11714595-11714918	chr1	+	11714598	11714812	True	NM_001014765,NM_018438,NM_012168,NM_033182,NM_183412,NM_183413	chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,+,+,+	FBXO44,FBXO6,FBXO2,FBXO44,FBXO44,FBXO44	101,9337,126,101,-217,101
chr17:17740522-17742519	chr17	+	17740719	17742093	True	NM_001005291,NM_004176,NM_001130091	chr17,chr17,chr17	-,-,+	SREBF1,SREBF1,LRRC48	-394,-394,134033
chr6:15017799-15018332	chr6	+	15017807	15018329	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	228197,645010
chr7:142919244-142920039	chr7	+	142919250	142920004	True	NM_176882,NM_014690	chr7,chr7	+,-	TAS2R40,FAM131B	-129,139229
chr7:138606465-138608268	chr7	+	138606901	138608035	True	NM_001164665,NM_001085429	chr7,chr7	-,+	KIAA1549,TMEM213	58088,-124220
chrX:153238986-153239607	chrX	+	153239172	153239554	True	NR_036174,NM_005334,NM_003492,NR_036175	chrX,chrX,chrX,chrX	+,-,+,-	MIR3202-1,HCFC1,TMEM187,MIR3202-2	6993,-2353,-1232,7123
chr2:61402286-61403170	chr2	+	61402304	61403083	True	NM_152392,NR_036496	chr2,chr2	+,-	AHSA2,LOC339803	1471,-30194
chrX:67653558-67653855	chrX	+	67653558	67653760	True	NM_002547,NM_001195214	chrX,chrX	-,+	OPHN1,YIPF6	-259,64863
chr11:9624999-9626861	chr11	+	9625044	9626524	True	NR_036539,NM_001143976	chr11,chr11	-,+	LOC644656,WEE1	-142799,-28862
chr1:6301480-6302054	chr1	+	6301499	6302040	True	NM_012405,NM_001024598	chr1,chr1	-,+	ICMT,HES3	-5455,2211
chr9:15527803-15529204	chr9	+	15528207	15528858	True	NM_173550,NM_033222	chr9,chr9	+,-	C9orf93,PSIP1	24238,-17204
chr5:179781262-179782139	chr5	+	179781380	179782118	True	NM_005110,NM_015455	chr5,chr5	-,+	GFPT2,CNOT6	-1065,139298
chr1:82323170-82324492	chr1	+	82323191	82324548	True	NM_012302,NM_024686	chr1,chr1	+,-	LPHN2,TTLL7	-57170,2140342
chr1:95391312-95391861	chr1	+	95391379	95391777	True	NM_001839,NR_033998	chr1,chr1	-,+	CNN3,LOC729970	1008,1806
chrX:137801680-137802266	chrX	+	137801713	137802287	True	NM_004114,NR_028597	chrX,chrX	-,+	FGF13,SRD5A1P1	-7886,726690
chr19:12034297-12034967	chr19	+	12034444	12034890	True	NM_144566,NM_001080411	chr19,chr19	+,-	ZNF700,ZNF433	1009,111685
chr7:92220104-92220811	chr7	+	92220288	92220824	True	NR_026902,NM_152789,NR_034169,NM_001040057	chr7,chr7,chr7,chr7	+,-,-,-	MGC16142,FAM133B,LOC728066,FAM133B	-52550,-582,-592,-582
chr10:25009698-25010179	chr10	+	25009715	25010223	True	NM_020824,NM_024838	chr10,chr10	-,+	ARHGAP21,THNSL1	2424,295284
chr5:150677444-150678160	chr5	+	150677607	150678175	True	NM_181774,NM_001167607,NM_001145017	chr5,chr5,chr5	-,+,-	SLC36A3,GM2A,SLC36A3	5209,-45054,5209
chr18:45439412-45439890	chr18	+	45439582	45439906	True	NM_005901,NM_001142397	chr18,chr18	-,+	SMAD2,CTIF	17082,625520
chr14:31484192-31485050	chr14	+	31484363	31485022	True	NM_007077,NR_030354,NM_001128126	chr14,chr14,chr14	+,-,+	AP4S1,MIR624,AP4S1	9660,-415,9660
chr17:56292118-56292751	chr17	+	56292130	56292589	True	NM_000502,NM_001165927,NM_017777	chr17,chr17,chr17	+,-,-	EPX,MKS1,MKS1	-22092,4434,4134
chr22:22225394-22227239	chr22	+	22225571	22226971	True	NM_148176,NM_002745,NM_138957	chr22,chr22,chr22	+,-,-	PPIL2,MAPK1,MAPK1	-205349,-3601,-3601
chr2:64977646-64978414	chr2	+	64977690	64978267	True	NM_014755,NR_034023	chr2,chr2	-,+	SERTAD2,LOC339807	-96644,-143300
chr10:128210074-128210550	chr10	+	128210106	128210556	True	NM_001004298,NM_001380	chr10,chr10	-,+	C10orf90,DOCK1	-96,383466
chr16:14917899-14918207	chr16	+	14917954	14918184	True	NR_023387,NM_014287	chr16,chr16	-,+	ABCC6P2,NOMO1	425,9458
chr16:14917899-14918207	chr16	+	16316805	16316949	False	NM_001171,NM_001079528,NM_001004067	chr16,chr16,chr16	-,-,+	ABCC6,ABCC6,NOMO3	429,429,9439
chr16:14917899-14918207	chr16	-	18582939	18583169	False	NR_003569,NM_173614,NM_001004060	chr16,chr16,chr16	+,-,-	ABCC6P1,NOMO2,NOMO2	-420,-9505,-9505
chr17:79353089-79353465	chr17	+	79353301	79353505	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	20034,-48827
chr1:159825359-159825589	chr1	+	159825410	159825572	True	NM_020125,NM_001013661,NM_001134233	chr1,chr1,chr1	+,-,-	SLAMF8,VSIG8,C1orf204	-28982,6925,-273
chr17:45974283-45975504	chr17	+	45974317	45975481	True	NM_003110,NM_199262	chr17,chr17	+,-	SP2,SP6	-859,-41077
chr15:41187365-41188274	chr15	+	41187625	41188307	True	NM_020857,NM_133639	chr15,chr15	+,-	VPS18,RHOV	-1049,-21138
chr4:187071866-187072249	chr4	+	187072184	187072244	True	NM_001006655,NM_015398,NM_021069	chr4,chr4,chr4	+,+,-	FAM149A,FAM149A,SORBS2	-1908,-6240,-194314
chr17:39639375-39640695	chr17	+	39639460	39640596	True	NM_005801,NM_003771,NM_002280	chr17,chr17,chr17	+,-,-	EIF1,KRT36,KRT35	204530,5572,-2068
chr1:23811337-23811874	chr1	+	23811449	23811931	True	NR_033691,NM_001143778,NM_017707	chr1,chr1,chr1	+,-,-	C1orf213,ASAP3,ASAP3	-115789,-699,-699
chr19:2867007-2867320	chr19	+	2867052	2867280	True	NM_021217,NM_024967	chr19,chr19	-,+	ZNF77,ZNF556	77739,52
chr15:42447987-42448249	chr15	+	42447997	42448293	True	NM_198141,NM_213600,NR_033151	chr15,chr15,chr15	+,-,-	GANC,PLA2G4F,PLA2G4F	118072,596,596
chr2:27363149-27364119	chr2	+	27363435	27363613	True	NM_175769,NM_178553,NM_013388	chr2,chr2,chr2	+,-,-	TCF23,C2orf53,PREB	8331,-1103,-5893
chr17:58228746-58229231	chr17	+	58228775	58229251	True	NM_000717,NR_027408	chr17,chr17	+,-	CA4,LOC653653	-1530,-48495
chr15:37109745-37110399	chr15	+	37109761	37110337	True	NR_027320,NM_032499	chr15,chr15	-,+	CSNK1A1P1,C15orf41	420,-177006
chr6:76326384-76327147	chr6	+	76326499	76326975	True	NM_015687,NM_015571	chr6,chr6	-,+	FILIP1,SENP6	-123003,-14933
chr8:97678060-97678990	chr8	+	97678424	97679008	True	NM_016134,NM_015942	chr8,chr8	+,-	PGCP,MTERFD1	-20976,-404628
chr8:70984776-70985056	chr8	+	70984850	70984994	True	NM_024504,NM_001128206	chr8,chr8	-,+	PRDM14,SULF1	-1288,-579873
chr10:97454816-97455888	chr10	+	97454988	97455910	True	NM_001143973,NM_001098175,NM_015631	chr10,chr10,chr10	-,+,-	TCTN3,ENTPD1,TCTN3	-1088,15625,-1088
chr17:2319069-2320075	chr17	+	2319192	2320118	True	NM_001098509,NR_028335	chr17,chr17	+,-	SGSM2,LOC284009	-78436,-462
chr16:85147264-85147631	chr16	+	85147447	85147653	True	NR_033984,NM_198491	chr16,chr16	+,-	LOC400548,FAM92B	23102,-1333
chr8:29207496-29207732	chr8	+	29207550	29207770	True	NM_057158,NM_001394,NM_024567	chr8,chr8,chr8	-,-,+	DUSP4,DUSP4,HMBOX1	-1228,547,-459376
chr1:145095827-145096373	chr1	+	145095835	145096355	True	NM_004892,NM_022359	chr1,chr1	+,-	SEC22B,PDE4DIP	51,-19649
chrX:154689736-154691022	chrX	+	154690001	154690895	True	NR_036049,NM_001007524,NM_001007523,NM_012151,NM_080720,NR_036260,NR_036259,NM_001017991,NM_001017990	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,-,-,-,-,+,+,-,-	MIR1184-1,F8A3,F8A2,F8A1,H2AFB3,MIR1184-3,MIR1184-2,H2AFB2,H2AFB1	-2874,-1740,-1740,-1725,-405,-2874,-2874,-413,-405
chrX:154689736-154691022	chrX	-	154112017	154112911	False	NR_036049,NM_001007524,NM_001007523,NM_012151,NM_080720,NR_036260,NM_019863,NR_036259,NM_001017990	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,-,-,-,+	MIR1184-1,F8A3,F8A2,F8A1,H2AFB3,MIR1184-3,F8,MIR1184-2,H2AFB1	2872,1738,1738,1723,405,2872,1716,2872,405
chrX:154689736-154691022	chrX	-	154609128	154610022	False	NR_036049,NM_001007524,NM_001007523,NM_012151,NM_080720,NR_036260,NR_036259,NM_001017991,NM_001017990	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,-,-,+,+	MIR1184-1,F8A3,F8A2,F8A1,H2AFB3,MIR1184-3,MIR1184-2,H2AFB2,H2AFB1	2875,1741,1741,1726,405,2875,2875,413,405
chr1:10000530-10001848	chr1	+	10000705	10001896	True	NM_032368,NM_022787	chr1,chr1	-,+	LZIC,NMNAT1	980,1589
chr3:141053544-141053951	chr3	+	141053601	141053987	True	NM_001178140,NM_001080412	chr3,chr3	-,+	TFDP2,ZBTB38	665292,-10597
chr5:92906755-92907005	chr5	+	92906798	92907042	True	NR_021491,NR_015369,NM_005654	chr5,chr5,chr5	-,-,+	FLJ42709,FLJ42709,NR2F1	9961,-299,12000
chr7:71799980-71800530	chr7	+	71800062	71800498	True	NR_001588,NM_001017440	chr7,chr7	+,-	SBDSP1,CALN1	499453,1760
chr1:46244987-46246249	chr1	+	46245180	46246147	True	NM_005897,NM_015112	chr1,chr1	-,+	IPP,MAST2	-28695,23137
chr19:57655486-57655766	chr19	+	57655534	57655820	True	NM_020903,NM_052882	chr19,chr19	+,-	USP29,ZIM3	-24086,806
chr18:77158178-77158788	chr18	+	77158210	77158717	True	NM_006162,NM_172388,NM_172389,NM_172387,NM_001146343,NM_172390	chr18,chr18,chr18,chr18,chr18,chr18	+,+,+,+,-,+	NFATC1,NFATC1,NFATC1,NFATC1,PQLC1,NFATC1	-2489,-2489,1608,1608,552989,-2489
chr15:71185371-71186392	chr15	+	71185385	71185964	True	NM_001199018,NM_020147,NM_001199017,NM_017691	chr15,chr15,chr15,chr15	+,-,+,+	LRRC49,THAP10,LRRC49,LRRC49	-417,-613,-508,-508
chr12:122243928-122244221	chr12	+	122243937	122244231	True	NM_015048,NR_002809	chr12,chr12	+,-	SETD1B,LOC338799	-1350,-2547
chr10:31317159-31318753	chr10	+	31317196	31318592	True	NM_001174093,NM_001143768,NM_182755,NR_026560,NM_001143771,NM_001143770,NM_001143766,NM_001143767	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,-,-,-,-,-,-,-	ZEB1,ZNF438,ZNF438,ZNF438,ZNF438,ZNF438,ZNF438,ZNF438	289508,2326,2326,2326,2326,2326,2326,2326
chr19:40817208-40817857	chr19	+	40817515	40817597	True	NM_001031696,NM_001626	chr19,chr19	+,-	PLD3,AKT2	36734,-26250
chr22:42896457-42896867	chr22	+	42896638	42896858	True	NR_027786,NM_015703	chr22,chr22	+,-	SERHL,RRP7A	-104,19021
chr11:3665974-3666761	chr11	+	3666161	3666727	True	NM_001079536,NM_053017,NM_004314	chr11,chr11,chr11	-,-,+	ART5,ART5,ART1	-2615,-2676,-147
chr2:200326769-200327234	chr2	+	200326889	200327107	True	NM_015265,NM_001172509,NM_001172517,NR_026830	chr2,chr2,chr2,chr2	-,-,-,+	SATB2,SATB2,SATB2,FLJ32063	8932,-4070,2774,5713
chr13:99231972-99233430	chr13	+	99232062	99233034	True	NM_001032296,NR_036129	chr13,chr13	-,+	STK24,MIR3170	-2666,-371335
chr12:6861796-6862033	chr12	+	6861812	6861880	True	NM_005439,NR_026581,NM_002824	chr12,chr12,chr12	-,-,+	MLF2,MLF2,PTMS	252,806,13660
chr17:53638953-53640039	chr17	+	53638955	53639744	True	NM_021213,NM_012329	chr17,chr17	+,-	PCTP,MMD	188595,-139614
chr4:682268-682569	chr4	+	682275	682501	True	NM_002477,NM_032219	chr4,chr4	+,-	MYL5,MFSD7	-10615,522
chr17:43141475-43143462	chr17	+	43141606	43143252	True	NM_021079,NM_024819	chr17,chr17	+,-	NMT1,DCAKD	-2985,-3133
chr21:11093877-11094763	chr21	+	11094177	11094639	True	NR_037458,NM_181704,NM_001187,NM_182482,NM_182481,NM_182484	chr21,chr21,chr21,chr21,chr21,chr21	+,-,-,-,-,-	MIR3687,BAGE4,BAGE,BAGE2,BAGE3,BAGE5	-1268033,4342,4354,4342,4342,4342
chr18:12075484-12076632	chr18	+	12075503	12076418	True	NM_023075,NM_014214	chr18,chr18	-,+	MPPE1,IMPA2	-166862,-94127
chr9:95857275-95857591	chr9	+	95857326	95857605	True	NM_032310,NM_004148	chr9,chr9	+,-	C9orf89,NINJ1	844,39015
chr2:227661746-227662112	chr2	+	227661768	227662158	True	NM_001167608,NM_005544	chr2,chr2	+,-	RHBDD1,IRS1	38512,1398
chr17:3459325-3459903	chr17	+	3459541	3459937	True	NM_145068,NM_001031681	chr17,chr17	-,+	TRPV3,CTNS	1402,79824
chrY:143810-144974	chrY	+	144956	145020	True	NR_028057,NM_018390,NM_012227	chrY,chrY,chrY	+,+,-	PLCXD1,PLCXD1,GTPBP6	-2016,3040,35917
chrY:143810-144974	chrX	+	194956	195020	False	NR_028057,NM_018390,NM_012227	chrX,chrX,chrX	+,+,-	PLCXD1,PLCXD1,GTPBP6	-2016,3040,35917
chr17:18130629-18130859	chr17	+	18130654	18130810	True	NM_004140,NM_002018	chr17,chr17	+,-	LLGL1,FLII	-1769,31295
chr3:44801787-44802173	chr3	+	44801793	44801885	True	NM_020242,NM_020696	chr3,chr3	+,-	KIF15,KIAA1143	1323,1344
chr4:87267753-87268818	chr4	+	87267784	87268857	True	NM_006264,NM_138980	chr4,chr4	+,-	PTPN13,MAPK10	246610,12569
chr10:81207226-81208048	chr10	+	81207440	81208016	True	NM_001099692,NM_153367	chr10,chr10	+,-	EIF5AL1,ZCCHC24	64340,-2057
chr5:132361118-132361366	chr5	+	132361240	132361409	True	NM_017665,NM_002154	chr5,chr5	-,+	ZCCHC10,HSPA4	882,26252
chr2:68695069-68695947	chr2	+	68695308	68695948	True	NM_173545,NM_001024680	chr2,chr2	+,-	APLF,FBXO48	-668,-918
chr9:123604343-123604999	chr9	+	123604387	123604971	True	NM_005047,NR_024408	chr9,chr9	-,+	PSMD5,LOC253039	285,348
chrX:132539227-132540958	chrX	+	132539531	132540318	True	NM_001101357,NM_001448	chrX,chrX	+,-	CCDC160,GPC4	830758,8938
chr5:55148491-55150292	chr5	+	55148510	55150135	True	NM_139017,NM_173514,NM_001190981	chr5,chr5,chr5	+,-,-	IL31RA,SLC38A9,IL6ST	-1232,-140347,140736
chr18:6856115-6857778	chr18	+	6856114	6857796	True	NR_034100,NM_001010000	chr18,chr18	-,+	LOC400643,ARHGAP28	72122,-21736
chr11:60479446-60479986	chr11	+	60479560	60479877	True	NM_004778,NM_031457	chr11,chr11	-,+	GPR44,MS4A8B	143624,-12565
chr5:121414023-121414632	chr5	+	121414036	121414680	True	NM_002317,NM_207317,NM_001178102	chr5,chr5,chr5	-,+,-	LOX,ZNF474,LOX	19,50534,-1118
chr7:143264930-143266315	chr7	+	143264931	143266228	True	NM_005232,NM_001008747	chr7,chr7	-,+	EPHA1,CTAGE15P	-158946,2661
chr7:143264930-143266315	chr7	-	143457428	143458725	False	NM_178561,NM_001130026	chr7,chr7	-,+	CTAGE6P,FAM115C	-2585,-44542
chr17:1012930-1013372	chr17	+	1012941	1013387	True	NM_001092,NM_013337	chr17,chr17	-,+	ABR,TIMM22	-617,-112635
chr7:50517410-50517688	chr7	+	50517412	50517602	True	NM_001042762,NM_022116,NR_033845	chr7,chr7,chr7	-,-,+	FIGNL1,FIGNL1,LOC100129427	536,536,81854
chr9:135854435-135855226	chr9	+	135854461	135855226	True	NM_001135031,NM_001162427,NM_004188	chr9,chr9,chr9	+,-,+	GFI1B,TSC1,GFI1B	-414,-34441,-414
chr20:44658612-44659363	chr20	+	44658683	44659379	True	NM_001134771,NM_022095,NM_020708	chr20,chr20,chr20	+,-,+	SLC12A5,ZNF335,SLC12A5	-8405,-57850,-913
chr16:67021514-67022113	chr16	+	67021945	67022117	True	NM_173815,NR_024525	chr16,chr16	+,-	CES4A,FAM96B	374,-53625
chr22:35860002-35861869	chr22	+	35860001	35861477	True	NM_005368,NM_006739	chr22,chr22	-,+	MB,MCM5	151957,-63936
chr19:17960265-17961122	chr19	+	17960901	17961011	True	NM_000980,NR_001593,NM_000215	chr19,chr19,chr19	+,+,-	RPL18A,RPL18AP3,JAK3	9719,9715,-2060
chr10:70884440-70886245	chr10	+	70884608	70885900	True	NM_001057,NM_001035260,NM_004896	chr10,chr10,chr10	-,+,+	TACR2,VPS26A,VPS26A	290831,-751,-751
chr2:242090429-242091132	chr2	+	242090428	242091151	True	NM_015148,NM_002712	chr2,chr2	-,+	PASK,PPP1R7	-1550,-584
chr17:40431525-40432561	chr17	+	40431855	40432609	True	NM_012448,NM_003152	chr17,chr17	-,+	STAT5B,STAT5A	-3431,6955
chr4:6780270-6781444	chr4	+	6780375	6781209	True	NM_001100590,NM_203462,NM_014743	chr4,chr4,chr4	+,-,+	KIAA0232,MRFAP1L1,KIAA0232	3249,-68769,3249
chr22:38864432-38864795	chr22	+	38864442	38864726	True	NM_016657,NM_006855,NM_152868	chr22,chr22,chr22	+,+,-	KDELR3,KDELR3,KCNJ4	-414,-414,-13239
chr19:6530839-6531213	chr19	+	6530843	6531077	True	NM_003811,NM_006087	chr19,chr19	+,-	TNFSF9,TUBB4	-46,-28513
chr15:21003915-21004268	chr15	+	21004128	21004316	True	NR_027992,NR_027411	chr15,chr15	-,+	BCL8,GOLGA8C	-42648,-236505
chr15:21003915-21004268	chr15	+	22010811	22010999	False	NR_015416,NR_024387	chr15,chr15	+,-	LOC727924,CXADRP2	267032,5929
chr9:116041303-116041734	chr9	+	116041305	116041597	True	NM_139286,NM_004697	chr9,chr9	-,+	CDC26,PRPF4	-3436,-3382
chrX:152863796-152864024	chrX	+	152863886	152863976	True	NM_001130997,NM_152274,NM_001395	chrX,chrX,chrX	-,-,+	FAM58A,FAM58A,DUSP9	706,706,43920
chr8:133070723-133070958	chr8	+	133070841	133070979	True	NM_001080399,NM_015137	chr8,chr8	-,+	OC90,EFR3A	698,-154536
chr1:40996069-40997159	chr1	+	40996750	40997160	True	NM_152373,NM_014747	chr1,chr1	+,-	ZNF684,RIMS3	72,134214
chr12:93962795-93963469	chr12	+	93962985	93963370	True	NM_003877,NM_003348	chr12,chr12	+,-	SOCS2,UBE2N	227,-126959
chr1:163131016-163132604	chr1	+	163131103	163132621	True	NM_001195303,NM_001113380	chr1,chr1	-,+	RGS5,RGS4	40054,-89462
chr11:118964091-118964954	chr11	+	118964215	118964870	True	NM_002105,NM_001024382,NM_001382,NM_000190	chr11,chr11,chr11,chr11	-,+,-,+	H2AFX,HMBS,DPAGT1,HMBS	1357,-5576,7965,-8686
chr17:59477699-59477925	chr17	+	59477873	59477941	True	NM_199290,NM_005994	chr17,chr17	-,+	NACA2,TBX2	190672,-667
chr15:92827712-92828576	chr15	+	92827749	92828291	True	NM_006011,NR_021493	chr15,chr15	+,-	ST8SIA2,LOC100144604	108848,287252
chr16:4402251-4402787	chr16	+	4402405	4402487	True	NM_016069,NM_138440	chr16,chr16	-,+	PAM16,VASN	-1032,19361
chr19:39687828-39688569	chr19	+	39687901	39688599	True	NM_001080468,NM_001001414	chr19,chr19	-,+	SYCN,NCCRP1	6357,-348
chr5:24645847-24646107	chr5	+	24646009	24646147	True	NM_020227,NM_006727	chr5,chr5	+,-	PRDM9,CDH10	-1138338,-924
chr15:43809229-43809844	chr15	+	43809248	43809716	True	NM_002373,NM_005657	chr15,chr15	+,-	MAP1A,TP53BP1	89,-6541
chr17:45900427-45901381	chr17	+	45900467	45901375	True	NM_145798,NM_033413,NM_145255,NR_037575,NM_148887	chr17,chr17,chr17,chr17,chr17	-,+,-,-,-	OSBPL7,LRRC46,MRPL10,MRPL10,MRPL10	-1320,7617,7582,7582,7582
chr11:4406402-4407923	chr11	+	4406509	4407875	True	NM_003141,NM_001005172	chr11,chr11	-,+	TRIM21,OR52K2	7101,62649
chr5:176449235-176449508	chr5	+	176449303	176449453	True	NM_012279,NM_001199298	chr5,chr5	+,-	ZNF346,UIMC1	243,-15508
chr3:100656442-100658326	chr3	+	100656552	100658144	True	NM_015429,NM_001195478	chr3,chr3	-,+	ABI3BP,TFG	54240,-228225
chr16:67360846-67361251	chr16	+	67360845	67360963	True	NM_018296,NM_001100915	chr16,chr16	+,-	LRRC36,KCTD19	-149,-184
chr10:133798677-133798970	chr10	+	133798684	133799009	True	NM_004052,NR_033191	chr10,chr10	-,+	BNIP3,PPP2R2D	-3249,-50778
chr14:103777309-103777772	chr14	+	103777370	103777770	True	NR_033938,NM_001969	chr14,chr14	-,+	LOC100131366,EIF5	-122005,22722
chr11:67195325-67195619	chr11	+	67195350	67195622	True	NM_005608,NM_003952	chr11,chr11	-,+	PTPRCAP,RPS6KB2	9581,312
chr21:46961022-46961699	chr21	+	46961070	46961658	True	NM_130444,NM_194255,NM_001205206,NM_001205207	chr21,chr21,chr21,chr21	+,-,-,-	COL18A1,SLC19A1,SLC19A1,SLC19A1	-85705,777,777,-6528
chr8:19796531-19796887	chr8	+	19796551	19796881	True	NM_001135691,NM_000237	chr8,chr8	-,+	SLC18A1,LPL	243886,-21
chr20:2089078-2089975	chr20	+	2089193	2089797	True	NM_080836,NM_024411	chr20,chr20	+,-	STK35,PDYN	-6719,-114262
chr13:113814335-113815465	chr13	+	113814344	113815338	True	NM_001127202,NM_003891	chr13,chr13	-,+	PCID2,PROZ	47741,-1427
chr17:33895347-33895954	chr17	+	33895473	33895773	True	NR_003037,NM_000286	chr17,chr17	+,-	SNORD7,PEX12	4902,9933
chr6:150468474-150469730	chr6	+	150468664	150469764	True	NM_030949,NM_024518	chr6,chr6	+,-	PPP1R14C,ULBP3	-4541,-78462
chr1:230849874-230850081	chr1	+	230850029	230850125	True	NM_000029,NM_006615	chr1,chr1	-,+	AGT,CAPN9	261,33004
chr7:98033311-98033774	chr7	+	98033439	98033618	True	NM_001159491,NM_018842	chr7,chr7	+,-	BRI3,BAIAP2L1	-122511,-3012
chr19:14314798-14315155	chr19	+	14314797	14315038	True	NM_014921,NR_024282,NM_001008701	chr19,chr19,chr19	-,+,-	LPHN1,LOC113230,LPHN1	2018,-131027,2018
chr17:40927697-40929252	chr17	+	40927716	40928826	True	NR_024462,NM_032353,NM_032387	chr17,chr17,chr17	-,+,+	LOC100190938,VPS25,WNK4	-14441,-2313,3822
chr16:27438870-27439582	chr16	+	27438940	27439530	True	NR_037158,NM_021798	chr16,chr16	-,+	LOC283888,IL21R	25234,-414
chr20:62480964-62481193	chr20	+	62481105	62481181	True	NM_080622,NM_025224	chr20,chr20	+,-	ABHD16B,ZBTB46	11384,-44249
chr21:15216150-15216411	chr13	+	19313087	19313175	False	NR_027995,NR_026852	chr13,chr13	-,+	LOC284232,LOC348021	132984,269223
chr21:15216150-15216411	chr18	-	14341628	14341679	True	NR_024076,NR_026756	chr18,chr18	-,+	CXADRP3,LOC284233	157077,-4258
chr13:25496844-25497120	chr13	+	25496860	25497072	True	NM_018451,NM_031277	chr13,chr13	-,+	CENPJ,RNF17	63,-158610
chr16:48643048-48643263	chr16	+	48643201	48643271	True	NM_153029,NM_031490	chr16,chr16	-,+	N4BP1,LONP2	899,-365042
chrX:56259717-56260372	chrX	+	56259736	56260272	True	NM_007250,NM_001159296,NR_002308	chrX,chrX,chrX	+,+,-	KLF8,KLF8,LOC442454	-965,-917,503795
chr1:47655238-47655637	chr1	+	47655316	47655396	True	NM_005764,NM_001010969	chr1,chr1	-,+	PDZK1IP1,CYP4A22	425,-52260
chr19:35992789-35993112	chr19	+	35992819	35993099	True	NM_014364,NR_033746,NM_001035516,NM_001126059	chr19,chr19,chr19,chr19	+,-,-,-	GAPDHS,DMKN,DMKN,DMKN	31214,8363,-6,8342
chr16:22218561-22218922	chr16	+	22218754	22218894	True	NM_001802,NM_013302	chr16,chr16	-,+	CDR2,EEF2K	167094,-1213
chr8:681222-681624	chr8	+	681294	681496	True	NM_207332,NM_183421	chr8,chr8	-,+	ERICH1,FBXO25	-68,-324537
chrX:68047765-68047973	chrX	+	68047857	68047923	True	NM_001032396,NM_004429	chrX,chrX	-,+	PJA1,EFNB1	337492,916
chr10:23214864-23215709	chr10	+	23214923	23215728	True	NM_005028,NM_173081	chr10,chr10	-,+	PIP4K2A,ARMC3	-211420,1225
chr5:159731979-159733000	chr5	+	159732115	159733012	True	NM_001445,NM_024565	chr5,chr5	+,-	FABP6,CCNJL	-75729,6612
chr19:19248567-19249268	chr19	+	19248637	19249313	True	NM_017814,NM_003721	chr19,chr19	-,+	TMEM161A,RFXANK	4,53694
chr2:133104857-133105302	chr2	+	133104864	133105212	True	NM_001508,NR_027020	chr2,chr2	+,-	GPR39,ANKRD30BL	68934,-89322
chr8:58925181-58925425	chr8	+	58925275	58925372	True	NM_000780,NM_147189	chr8,chr8	-,+	CYP7A1,FAM110B	487401,-18214
chr2:178064301-178064744	chr2	+	178064309	178064613	True	NM_194247,NR_036075	chr2,chr2	+,-	HNRNPA3,MIR3128	12808,56179
chr19:3555891-3556132	chr19	+	3555901	3556175	True	NM_001135580,NM_001042680,NM_021731,NM_006339,NM_174983	chr19,chr19,chr19,chr19,chr19	+,-,-,+,-	C19orf71,C19orf28,C19orf28,HMG20B,C19orf28	-16797,1446,1446,16767,1446
chr16:3210468-3210917	chr16	+	3210467	3210525	True	NR_024167,NM_001134655	chr16,chr16	-,+	MGC3771,ZNF213	-44868,-25384
chr11:67224101-67224791	chr11	+	67224134	67224650	True	NM_145200,NM_206997	chr11,chr11	+,-	CABP4,GPR152	-1367,-3934
chr3:118703863-118704361	chr3	+	118703934	118704334	True	NM_152539,NM_001015887	chr3,chr3	+,-	C3orf30,IGSF11	160662,49392
chr1:234509151-234509352	chr1	+	234509198	234509400	True	NM_001012985,NM_005646	chr1,chr1	+,-	C1orf31,TARBP1	28,105499
chr1:54872823-54873234	chr1	+	54872850	54873198	True	NM_018070,NM_145716,NM_147161,NM_001009955	chr1,chr1,chr1,chr1	-,-,+,-	SSBP3,SSBP3,ACOT11,SSBP3	-871,-871,140608,-758
chr11:61380348-61381484	chr11	+	61380617	61381291	True	NM_004200,NR_002775	chr11,chr11	-,+	SYT7,RPLP0P2	-32319,1216
chr1:232941668-232942523	chr1	+	232941935	232942509	True	NM_020808,NM_019090	chr1,chr1	-,+	SIPA1L2,KIAA1383	-290692,-1351
chr1:156834667-156835314	chr1	+	156834672	156835144	True	NM_001012331,NM_002529,NM_014215	chr1,chr1,chr1	+,+,-	NTRK1,NTRK1,INSRR	-4052,-4052,-5960
chr2:238598585-238599234	chr2	+	238598661	238599021	True	NM_001137551,NM_001137552,NM_001137553,NM_004735,NR_033308	chr2,chr2,chr2,chr2,chr2	+,+,+,+,-	LRRFIP1,LRRFIP1,LRRFIP1,LRRFIP1,RAB17	1785,1785,1785,1785,-98892
chr1:41948216-41949170	chr1	+	41948333	41949047	True	NM_001956,NR_037868	chr1,chr1	-,+	EDN2,LOC100507178	1347,-468122
chr2:43905653-43906725	chr2	+	43905977	43906195	True	NM_001101330,NM_172069	chr2,chr2	-,+	LOC728819,PLEKHH2	-2516,-41599
chr7:100316552-100316800	chr7	+	100316654	100316844	True	NM_000799,NM_022574	chr7,chr7	+,-	EPO,GIGYF1	1578,-29784
chr4:3075370-3075578	chr4	+	3075472	3075626	True	NM_002111,NM_003703	chr4,chr4	+,-	HTT,NOP14	781,-110354
chr1:17445982-17446192	chr1	+	17446098	17446176	True	NM_007365,NM_013358	chr1,chr1	-,+	PADI2,PADI1	-150,85444
chr17:47867948-47868739	chr17	+	47867974	47868664	True	NM_007067,NM_001199155,NM_001199156,NM_001199157,NM_001199158,NM_030802	chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,-	MYST2,MYST2,MYST2,MYST2,MYST2,FAM117A	-2045,-2045,-2045,-2045,-2045,-26456
chr12:49389449-49390710	chr12	+	49389733	49390697	True	NM_015086,NM_005430	chr12,chr12	-,+	DDN,WNT1	2441,-17548
chr6:27340213-27340564	chr6	+	27340265	27340469	True	NM_001076781,NR_024553,NR_002722	chr6,chr6,chr6	+,-,-	ZNF391,ZNF204P,ZNF204P	16054,2746,-961
chr22:27039055-27039296	chr22	+	27039168	27039248	True	NR_003491,NM_001887	chr22,chr22	+,-	MIAT,CRYBB1	14197,-25177
chr9:130340918-130341247	chr9	+	130340985	130341295	True	NM_001032221,NM_022833,NM_001035534	chr9,chr9,chr9	+,-,-	STXBP1,FAM129B,FAM129B	33190,-9630,23
chr18:43405545-43407174	chr18	+	43405906	43407220	True	NM_213602,NM_020964	chr18,chr18	+,-	SIGLEC15,EPG5	-412,140135
chrX:49040379-49041136	chrX	+	49040453	49040997	True	NM_002668,NM_006150	chrX,chrX	+,-	PLP2,PRICKLE3	-12320,1829
chr17:57410021-57410515	chr17	+	57410021	57410535	True	NM_182620,NM_001005404	chr17,chr17	-,+	SKA2,YPEL2	-177221,-1019
chr22:32807419-32807877	chr22	+	32807458	32807852	True	NM_014306,NM_001098535	chr22,chr22	-,+	C22orf28,RFPL3	472,-53655
chr5:68458997-68459551	chr5	+	68459075	68459146	True	NM_176816,NM_031966	chr5,chr5	-,+	CCDC125,CCNB1	157315,3766
chr1:78148847-78149133	chr1	+	78148908	78149084	True	NM_015534,NM_198549	chr1,chr1	-,+	ZZZ3,FAM73A	-565,96224
chr5:6715982-6716617	chr5	+	6716016	6716640	True	NM_001171805,NR_037947,NM_006999	chr5,chr5,chr5	+,-,+	PAPD7,NSUN2,PAPD7	-1349,-82543,-1349
chr1:112051639-112052033	chr1	+	112051819	112051985	True	NM_020683,NM_174896,NM_000677	chr1,chr1,chr1	-,+,-	ADORA3,C1orf162,ADORA3	-5076,-35266,-5076
chr8:144789472-144789706	chr8	+	144789497	144789715	True	NM_001162914,NM_139021	chr8,chr8	-,+	LOC100130274,MAPK15	614,8791
chr2:153190567-153191522	chr2	+	153190718	153191513	True	NM_052905,NM_005843	chr2,chr2	+,-	FMNL2,STAM2	237,-158212
chr1:247069601-247071422	chr1	+	247070011	247071428	True	NR_015422,NM_015446	chr1,chr1	+,-	LOC149134,AHCTF1	-117147,23349
chr17:40897417-40897662	chr17	+	40897416	40897648	True	NM_005854,NM_001991	chr17,chr17	+,-	RAMP2,EZH1	15563,-345
chr16:5083065-5083273	chr16	+	5083072	5083238	True	NM_019109,NM_016256	chr16,chr16	+,-	ALG1,NAGPA	38571,754
chr11:15135034-15136144	chr11	+	15135053	15135969	True	NM_001042536,NM_001741,NM_001031853	chr11,chr11,chr11	+,-,+	INSC,CALCA,INSC	514,-141221,-1134
chr5:112769187-112769660	chr5	+	112769205	112769635	True	NM_032028,NM_022828	chr5,chr5	-,+	TSSK1B,YTHDC2	1143,79755
chr22:38453749-38454936	chr22	+	38453805	38454657	True	NM_013356,NM_001039584,NM_012407,NM_001039583	chr22,chr22,chr22,chr22	-,+,+,+	SLC16A8,PICK1,PICK1,PICK1	24563,-596,-596,-596
chr5:173161994-173162315	chr5	+	173162012	173162226	True	NM_030627,NM_138369	chr5,chr5	+,-	CPEB4,BOD1	153104,-118346
chr9:116263586-116264455	chr9	+	116263636	116264468	True	NM_017443,NM_130795	chr9,chr9	-,+	POLE3,RGS3	-90607,20
chr1:110948562-110949166	chr1	+	110948791	110949042	True	NM_032414,NM_006402	chr1,chr1	+,-	PROK1,HBXIP	44745,1563
chr16:30440643-30440911	chr16	+	30440682	30440840	True	NM_024096,NM_016643	chr16,chr16	-,+	DCTPP1,ZNF771	583,-22004
chrX:102974824-102976414	chrX	+	102974881	102976081	True	NM_001024452,NM_001172285,NM_182541	chrX,chrX,chrX	-,-,+	GLRA4,GLRA4,TMEM31	7528,7528,-9097
chr6:27707042-27707296	chr6	+	27707179	27707335	True	NM_003509,NM_003519	chr6,chr6	+,-	HIST1H2AI,HIST1H2BL	68641,68424
chr5:126111692-126112188	chr5	+	126111720	126112170	True	NM_005573,NM_001198557,NM_001202404	chr5,chr5,chr5	+,+,-	LMNB1,LMNB1,ALDH7A1	144,674,-180638
chr11:64643973-64645492	chr11	+	64643972	64645250	True	NM_006795,NM_006244	chr11,chr11	-,+	EHD1,PPP2R5B	991,46892
chr15:40063396-40064882	chr15	+	40063436	40064312	True	NM_001013703,NM_152597	chr15,chr15	+,-	EIF2AK4,FSIP1	162034,10785
chr14:23589276-23589931	chr14	+	23589434	23589963	True	NM_001805,NM_017924	chr14,chr14	-,+	CEBPE,C14orf119	-960,-24697
chr18:12309224-12309779	chr18	+	12309336	12309808	True	NM_006796,NM_032525	chr18,chr18	-,+	AFG3L2,TUBB6	67517,-1135
chr2:61766017-61767491	chr2	+	61766260	61767288	True	NM_152392,NM_003400	chr2,chr2	+,-	AHSA2,XPO1	-361756,-842
chr22:42324751-42325720	chr22	+	42324775	42325759	True	NM_052945,NR_024355	chr22,chr22	-,+	TNFRSF13C,LOC339674	-1954,22431
chr1:151147098-151147842	chr1	+	151147112	151147766	True	NM_013353,NR_037937,NM_001204856,NM_001136543,NM_024041,NM_212551	chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,-,+,-	TMOD4,SCNM1,SCNM1,LYSMD1,SCNM1,LYSMD1	831,-8665,-8665,-8688,-8665,-8742
chr3:160472598-160472856	chr3	+	160472606	160472894	True	NM_139245,NM_002268	chr3,chr3	+,-	PPM1L,KPNA4	1101,-189230
chr1:117113822-117114093	chr1	+	117113841	117114015	True	NM_001779,NM_001144822,NR_031564,NR_026665	chr1,chr1,chr1,chr1	-,-,+,-	CD58,CD58,MIR320B1,CD58	-126,-126,100355,-126
chr3:47556689-47558055	chr3	+	47556774	47557938	True	NM_015466,NM_001031703	chr3,chr3	+,-	PTPN23,C3orf75	-134341,-1575
chr6:10877405-10878844	chr6	+	10877563	10878427	True	NM_004752,NM_001040274	chr6,chr6	-,+	GCM2,SYCP2L	3734,8636
chr8:29783265-29783764	chr8	+	29783289	29783779	True	NR_024473,NR_036104	chr8,chr8	+,-	LOC286135,MIR3148	-4311,31135
chr5:148725559-148725794	chr5	+	148725564	148725841	True	NM_152407,NM_014443	chr5,chr5	+,-	GRPEL2,IL17B	-638,33047
chr9:44759684-44760038	chr9	+	44759725	44760047	True	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	230188,-1128995
chr9:44759684-44760038	chr9	+	67680963	67681285	False	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	112954,245475
chr9:44759684-44760038	chr9	-	45110951	45111273	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-120766,-1480221
chr9:44759684-44760038	chr9	+	46272046	46272368	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2641316,415197
chr9:44759684-44760038	chr9	-	47168172	47168494	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-3537442,-480657
chrX:154117647-154118229	chrX	+	154117659	154118234	True	NR_036049,NM_001007524,NM_001007523,NM_012151,NM_080720,NR_036260,NM_019863,NR_036259,NM_001017990	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,-,-,-,+	MIR1184-1,F8A3,F8A2,F8A1,H2AFB3,MIR1184-3,F8,MIR1184-2,H2AFB1	-1926,-3060,-3060,-3075,-4393,-1926,-3082,-1926,-4393
chrX:154117647-154118229	chrX	-	154684679	154685254	False	NR_036049,NM_001007524,NM_001007523,NM_012151,NM_080720,NR_036260,NR_036259,NM_001017991,NM_001017990	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,-,-,-,-,+,+,-,-	MIR1184-1,F8A3,F8A2,F8A1,H2AFB3,MIR1184-3,MIR1184-2,H2AFB2,H2AFB1	1923,3057,3057,3072,4392,1923,1923,4384,4392
chrX:154117647-154118229	chrX	+	154614765	154615340	False	NR_036049,NM_001007524,NM_001007523,NM_012151,NM_080720,NR_036260,NR_036259,NM_001017991,NM_001017990	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,-,-,+,+	MIR1184-1,F8A3,F8A2,F8A1,H2AFB3,MIR1184-3,MIR1184-2,H2AFB2,H2AFB1	-1918,-3052,-3052,-3067,-4388,-1918,-1918,-4380,-4388
chr19:58922383-58923101	chr19	+	58922482	58923022	True	NM_003433,NM_173548	chr19,chr19	-,+	ZNF132,ZNF584	28625,-2473
chr12:14721733-14722218	chr12	+	14721851	14722169	True	NM_024829,NM_018179	chr12,chr12	-,+	PLBD1,ATF7IP	-1060,-203302
chr2:176972895-176973178	chr2	+	176972931	176973101	True	NM_002148,NM_001080458,NM_021192,NM_021193	chr2,chr2,chr2,chr2	+,-,+,+	HOXD10,EVX2,HOXD11,HOXD12	8390,-24241,-907,-8461
chr5:180417014-180417607	chr5	+	180417175	180417643	True	NM_197975,NM_152283	chr5,chr5	+,-	BTNL3,ZFP62	-1389,-128889
chr8:17662917-17663390	chr8	+	17662938	17663435	True	NM_006197,NM_001001925,NM_001001924	chr8,chr8,chr8	+,-,-	PCM1,MTUS1,MTUS1	116930,-4512,-4512
chr11:59614486-59616156	chr11	+	59614576	59616181	True	NM_004177,NM_005142	chr11,chr11	+,-	STX3,GIF	-92095,-1602
chr5:126854485-126854999	chr5	+	126854545	126855000	True	NM_130809,NM_001164478	chr5,chr5	+,-	PRRC1,FLJ44606	-1294,-445361
chr16:31146108-31146631	chr16	+	31146240	31146632	True	NM_002773,NM_182958	chr16,chr16	-,+	PRSS8,MYST1	569,-17306
chr19:56689099-56689917	chr19	+	56689190	56689957	True	NM_001145546,NM_001080456,NM_033106	chr19,chr19,chr19	+,-,+	GALP,ZSCAN5B,GALP	-1852,14514,-1852
chrX:103416889-103417194	chrX	+	103417153	103417226	True	NM_001012755,NM_207318	chrX,chrX	-,+	MCART6,FAM199X	-15445,-5913
chr8:38991376-38992596	chr8	+	38991496	38992301	True	NM_078473,NM_145004	chr8,chr8	-,+	TM2D2,ADAM32	-137455,-26497
chr11:15140609-15140950	chr11	+	15140701	15140963	True	NM_001031853,NM_001741,NM_001042536	chr11,chr11,chr11	+,-,+	INSC,CALCA,INSC	-6782,-146869,-4268
chr1:53198568-53199956	chr1	+	53198667	53199986	True	NM_024646,NM_023077	chr1,chr1	+,-	ZYG11B,SELRC1	-6596,-34629
chr2:209056511-209057595	chr2	+	209057208	209057617	True	NM_001178000,NM_001099334	chr2,chr2	+,-	PIKFYVE,C2orf80	73373,-2435
chr1:150130806-150131150	chr1	+	150130888	150131132	True	NM_016274,NM_001136479	chr1,chr1	+,-	PLEKHO1,ANP32E	-8777,75944
chrX:100854688-100854918	chrX	+	100854749	100854883	True	NM_001009584,NM_016607	chrX,chrX	-,+	ARMCX6,ARMCX3	18158,23236
chrX:100854688-100854918	chrX	-	100868873	100869007	False	NM_019007,NM_001009584,NM_001184768,NR_033670,NM_016607,NM_177948,NM_177947,NR_033669	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,+,+,+,-	ARMCX6,ARMCX6,ARMCX6,ARMCX6,ARMCX3,ARMCX3,ARMCX3,ARMCX6	4034,4034,4034,4034,9112,9343,9112,4034
chr2:114255417-114256452	chr2	+	114256322	114256476	True	NM_012184,NR_024005	chr2,chr2	+,-	FOXD4L1,DDX11L2	184,102727
chr7:99766647-99767132	chr7	+	99766941	99767103	True	NM_024637,NM_152742,NM_012447	chr7,chr7,chr7	-,-,+	GAL3ST4,GPC2,STAG3	-568,7937,8434
chr6:170575014-170576845	chr6	+	170575062	170576868	True	NM_032448,NR_002787	chr6,chr6	+,-	FAM120B,LOC154449	38975,-3405
chr4:187065193-187065469	chr4	+	187065197	187065509	True	NM_001006655,NM_015398,NM_021069	chr4,chr4,chr4	+,+,-	FAM149A,FAM149A,SORBS2	4817,485,-187327
chr8:118176175-118176598	chr8	+	118176232	118176442	True	NM_173851,NM_006265	chr8,chr8	+,-	SLC30A8,RAD21	-28946,-289127
chr3:57743966-57745095	chr3	+	57743985	57744991	True	NM_007159,NM_152678	chr3,chr3	+,-	SLMAP,FAM116A	-871,-65169
chr6:158586480-158588424	chr6	+	158586508	158588244	True	NM_207118,NM_032861	chr6,chr6	+,-	GTF2H5,SERAC1	1134,1118
chr1:31655294-31655500	chr1	+	31655389	31655451	True	NM_024522,NM_016505	chr1,chr1	-,+	NKAIN1,ZCCHC17	57333,114390
chrX:70934340-70934604	chrX	+	70934339	70934475	True	NR_034005,NM_001145140,NM_001145139	chrX,chrX,chrX	+,-,-	FLJ46446,CXorf49,CXorf49B	-17344,3710,3710
chrX:70934340-70934604	chrX	+	70882963	70883099	False	NR_034004,NM_001504	chrX,chrX	+,-	LOC100132741,CXCR3	33946,-44596
chrX:70934340-70934604	chrX	-	70986799	70986935	False	NR_001568,NM_001145140,NM_001145139	chrX,chrX,chrX	-,+,+	BCYRN1,CXorf49,CXorf49B	-37837,-3710,-3710
chr5:176786400-176786626	chr5	+	176786436	176786580	True	NM_006816,NM_006480	chr5,chr5	-,+	LMAN2,RGS14	-7551,-1643
chr12:5152963-5153207	chr12	+	5153053	5153123	True	NM_006422,NM_002234	chr12,chr12	-,+	AKAP3,KCNA5	-398710,-19
chr1:13334300-13334715	chr1	+	13334465	13334728	True	NM_001013407,NM_001100631,NM_001013692	chr1,chr1,chr1	+,-,-	PRAMEF5,PRAMEF22,PRAMEF3	25090,-2794,-2773
chr1:13334300-13334715	chr1	-	13032485	13032748	False	NM_001100631,NM_001010889	chr1,chr1	+,-	PRAMEF22,PRAMEF6	2794,-25079
chr1:13334300-13334715	chr1	-	13137390	13137653	False	NM_001100631,NM_001013407	chr1,chr1	+,-	PRAMEF22,PRAMEF5	-101901,-19639
chr1:154543928-154544497	chr1	+	154543947	154544273	True	NM_000748,NM_017582	chr1,chr1	+,-	CHRNB2,UBE2Q1	-3741,-12827
chr18:24281037-24282148	chr18	+	24281170	24282186	True	NR_026908,NR_024259	chr18,chr18	+,-	C18orf16,LOC728606	163085,1466
chrX:48108862-48110097	chrX	+	48109279	48110105	True	NM_175723,NM_005635	chrX,chrX	-,+	SSX5,SSX1	-53080,4691
chr5:53607271-53608052	chr5	+	53607312	53607878	True	NM_006308,NM_019087	chr5,chr5	+,-	HSPB3,ARL15	143552,-909
chr12:32909794-32911447	chr12	+	32909835	32911277	True	NM_001040436,NM_012063	chr12,chr12	-,+	YARS2,DNM1L	-948,-77749
chr21:45970547-45970830	chr21	+	45970562	45970802	True	NM_198696,NM_198687,NM_198693	chr21,chr21,chr21	-,+,-	KRTAP10-3,KRTAP10-4,KRTAP10-2	7891,22803,636
chr3:197026682-197027193	chr3	+	197026683	197027219	True	NM_001204386,NM_004087,NR_024388,NM_001098424	chr3,chr3,chr3,chr3	-,-,+,-	DLG1,DLG1,LOC152217,DLG1	-1236,-1236,-357242,-1236
chr19:58365353-58367038	chr19	+	58365409	58366914	True	NM_032828,NR_024162,NM_001204817	chr19,chr19,chr19	+,-,+	ZNF587,FKBP1AP1,ZNF587	-4287,-26579,-4287
chr19:58365353-58367038	chr19	-	58424307	58424466	False	NM_032828,NM_152475	chr19,chr19	+,-	ZNF587,ZNF417	-63178,3563
chr2:175351403-175351715	chr2	+	175351593	175351763	True	NM_001033045,NM_152529,NM_024583	chr2,chr2,chr2	-,-,+	GPR155,GPR155,SCRN3	98,98,-91187
chr3:70177316-70178181	chr3	+	70177345	70178192	True	NM_198178,NM_015123	chr3,chr3	+,-	MITF,FRMD4B	-191645,-741915
chr10:94451990-94452332	chr10	+	94452000	94452272	True	NM_002729,NM_004969	chr10,chr10	+,-	HHEX,IDE	-2370,-118148
chr19:37700910-37701431	chr19	+	37701054	37701408	True	NM_152279,NM_152604	chr19,chr19	-,+	ZNF585B,ZNF383	93,15957
chr8:103873990-103875382	chr8	+	103874266	103875260	True	NM_015878,NM_148174,NM_001695	chr8,chr8,chr8	-,-,+	AZIN1,AZIN1,ATP6V1C1	1187,1187,157987
chr1:67628532-67629493	chr1	+	67628593	67629346	True	NM_001013674,NM_144701	chr1,chr1	-,+	C1orf141,IL23R	-34373,2822
chr20:58515734-58516168	chr20	+	58515762	58516188	True	NM_022106,NM_014258,NM_001190827,NM_006242,NM_001190826	chr20,chr20,chr20,chr20,chr20	+,-,+,-,+	C20orf177,SYCP2,C20orf177,PPP1R3D,C20orf177	-369,-8553,-369,-410,-6994
chr11:119021485-119023109	chr11	+	119021887	119023041	True	NM_001145018,NM_022169,NM_001142505	chr11,chr11,chr11	-,+,+	CCDC153,ABCG4,ABCG4	43593,-2190,-1641
chr3:5020933-5021212	chr3	+	5020936	5021193	True	NR_037903,NM_003670	chr3,chr3	-,+	LOC100507582,BHLHE40	-72750,54
chr18:54306965-54307958	chr18	+	54307183	54308003	True	NM_015285,NM_004786,NR_024546	chr18,chr18,chr18	+,-,-	WDR7,TXNL1,TXNL1	10612,-1263,-1263
chr16:15029044-15029308	chr16	+	15029046	15029230	True	NR_023387,NM_006985	chr16,chr16	-,+	ABCC6P2,NPIP	-110487,2069
chr16:15029044-15029308	chr16	+	16427533	16427717	False	NR_036447,NM_001079528	chr16,chr16	+,-	PKD1P1,ABCC6	-16118,-110205
chr16:15029044-15029308	chr16	-	18468712	18468896	False	NR_036142,NR_003569	chr16,chr16	-,+	MIR3180-2,ABCC6P1	27278,113673
chr9:38068470-38068676	chr9	+	38068525	38068665	True	NM_003028,NM_024345	chr9,chr9	-,+	SHB,DCAF10	595,-267786
chr5:175304868-175305157	chr5	+	175304904	175305196	True	NM_032361,NM_001008220	chr5,chr5	-,+	THOC3,CPLX2	90399,-6454
chr11:61273860-61274959	chr11	+	61274037	61274969	True	NM_001145077,NM_004200	chr11,chr11	+,-	LRRC10B,SYT7	1302,73379
chr6:26224611-26225266	chr6	+	26224610	26225314	True	NM_003518,NM_003532,NM_005320,NM_021052	chr6,chr6,chr6,chr6	-,+,-,+	HIST1H2BG,HIST1H3E,HIST1H1D,HIST1H2AE	-7738,68,9952,-7513
chr14:77288588-77290137	chr14	+	77289115	77289914	True	NM_015305,NM_194287	chr14,chr14	-,+	ANGEL1,C14orf166B	-9832,2810
chr10:114056405-114057901	chr10	+	114056569	114057917	True	NR_028134,NM_058222	chr10,chr10	-,+	GUCY2GP,TECTB	58486,-13127
chr8:1770326-1771360	chr8	+	1770329	1771403	True	NR_030326,NM_014629,NR_033895	chr8,chr8,chr8	+,+,-	MIR596,ARHGEF10,LOC286083	-4983,745,-519502
chr1:155232305-155233809	chr1	+	155232407	155233563	True	NM_003993,NM_020897,NM_005698,NM_198264,NM_052837,NM_006589	chr1,chr1,chr1,chr1,chr1,chr1	-,+,-,-,-,-	CLK2,HCN3,SCAMP3,FAM189B,SCAMP3,FAM189B	9768,13810,-212,-7133,-212,-7133
chr11:14523600-14525431	chr11	+	14524000	14525183	True	NM_001144062,NM_016451,NM_001144061,NM_000922	chr11,chr11,chr11,chr11	-,-,-,+	COPB1,COPB1,COPB1,PDE3B	-2585,-2596,-2559,140085
chr5:101763763-101765725	chr5	+	101763857	101765747	True	NM_000919,NM_173488	chr5,chr5	+,-	PAM,SLCO6A1	435779,69027
chr2:198651266-198651477	chr2	+	198651267	198651337	True	NM_033030,NM_006226,NM_197970	chr2,chr2,chr2	-,+,-	BOLL,PLCL1,BOLL	-1193,18088,-329
chr16:49860045-49860900	chr16	+	49860168	49860772	True	NM_153261,NM_015069	chr16,chr16	+,-	TMEM188,ZNF423	198416,198
chr6:130539514-130541237	chr6	+	130539519	130541083	True	NM_032438,NM_001017373,NM_152552	chr6,chr6,chr6	+,-,-	L3MBTL3,SAMD3,SAMD3	-199842,3076,-3025
chr9:116354703-116355915	chr9	+	116354720	116355909	True	NM_017443,NM_144489	chr9,chr9	-,+	POLE3,RGS3	-181691,290
chr5:78417155-78417442	chr5	+	78417162	78417292	True	NM_013391,NM_001713	chr5,chr5	-,+	DMGDH,BHMT	-51713,-9609
chr8:54780471-54781013	chr8	+	54780624	54781032	True	NM_003702,NM_213619	chr8,chr8	+,-	RGS20,ATP6V1H	12409,-24774
chr8:130956003-130956551	chr8	+	130956265	130956587	True	NM_016623,NR_031613	chr8,chr8	-,+	FAM49B,MIR1208	-4265,-1793963
chr3:72937269-72937546	chr3	+	72937373	72937437	True	NM_001080393,NM_018130	chr3,chr3	+,-	GXYLT2,SHQ1	-39,-39775
chr21:45608398-45609148	chr21	+	45608516	45608996	True	NM_198155,NM_015259	chr21,chr21	+,-	C21orf33,ICOSLG	-55073,51897
chr17:28564170-28564973	chr17	+	28564620	28564886	True	NR_029945,NM_001045	chr17,chr17	+,-	MIR423,SLC6A4	-120575,-1666
chr5:179284814-179285156	chr5	+	179285029	179285203	True	NM_003900,NM_001017987,NM_016175	chr5,chr5,chr5	+,-,-	SQSTM1,C5orf45,C5orf45	-37246,687,687
chr21:43372495-43372873	chr21	+	43372502	43372761	True	NM_015500,NR_027273	chr21,chr21	-,+	C2CD2,C21orf121	1289,69351
chr11:63931149-63931537	chr11	+	63931202	63931591	True	NM_006819,NM_014067	chr11,chr11	+,-	STIP1,MACROD1	21995,2051
chr5:76936362-76936629	chr5	+	76936369	76936653	True	NM_032109,NM_003719	chr5,chr5	-,+	OTP,PDE8B	-1847,-429714
chr5:132159603-132160963	chr5	+	132159668	132160946	True	NM_001172700,NM_175873,NM_133456	chr5,chr5,chr5	-,+,-	SHROOM1,ANKRD43,SHROOM1	5694,-10686,1106
chr17:80171771-80172327	chr17	+	80172012	80172346	True	NM_001042422,NM_198082	chr17,chr17	+,-	SLC16A3,CCDC57	13946,-1323
chr11:4111350-4112640	chr11	+	4111419	4112633	True	NM_001665,NM_001033	chr11,chr11	-,+	RHOG,RRM1	-249206,3290
chr11:72356685-72357112	chr11	+	72356690	72357068	True	NM_033388,NR_026572,NM_001143839	chr11,chr11,chr11	+,-,-	ATG16L2,PDE2A,PDE2A	168382,-3203,-3186
chr17:34077978-34078609	chr17	+	34077977	34078409	True	NM_145272,NM_139285	chr17,chr17	+,-	C17orf50,GAS2L2	9506,1538
chr1:43767012-43767262	chr1	+	43767177	43767269	True	NM_005424,NM_001164829	chr1,chr1	+,-	TIE1,C1orf210	-569,-15889
chr1:247614725-247615122	chr1	+	247614739	247615151	True	NM_183395,NM_001004492	chr1,chr1	+,-	NLRP3,OR2B11	-33439,183
chr17:36349153-36349737	chr17	+	36349593	36349673	True	NM_032258,NM_001123391	chr17,chr17	-,-	TBC1D3F,TBC1D3	-927,-927
chr14:92226568-92227869	chr14	+	92226663	92227693	True	NM_024764,NM_017437	chr14,chr14	-,+	CATSPERB,CPSF2	-28250,360604
chr1:156646063-156646417	chr1	+	156646084	156646252	True	NM_021948,NM_006617	chr1,chr1	+,-	BCAN,NES	-34395,987
chr17:51835205-51835533	chr17	+	51835219	51835519	True	NM_032559,NR_027941	chr17,chr17	+,-	KIF2B,COX11	64719,1210595
chr21:14410028-14410668	chr21	+	14410158	14410450	True	NR_026916,NR_036164	chr21,chr21	+,-	ANKRD30BP2,MIR3156-3	36,368381
chr19:42894681-42895026	chr19	+	42894718	42894842	True	NM_032488,NM_001410	chr19,chr19	-,+	CNFN,MEGF8	-274,-65008
chr15:79236837-79237118	chr15	+	79236852	79237010	True	NM_004390,NM_206839	chr15,chr15	-,+	CTSH,MORF4L1	460,-71731
chr22:19474931-19475156	chr22	+	19475074	19475165	True	NM_005659,NM_001178010,NM_001178011,NM_001035247,NM_003504	chr22,chr22,chr22,chr22,chr22	-,+,+,-,+	UFD1L,CDC45,CDC45,UFD1L,CDC45	-8336,-7715,-7715,-8336,-7713
chr17:59535074-59536250	chr17	+	59535217	59536136	True	NM_199290,NM_018488	chr17,chr17	-,+	NACA2,TBX4	132484,-1461
chr6:33308061-33309103	chr6_qbl_hap6	+	4540507	4540570	False	NM_001350,NM_001185181	chr6_qbl_hap6,chr6_qbl_hap6	-,+	DAXX,PFDN6	-17465,-50913
chr6:33308061-33309103	chr6_mcf_hap5	+	4781935	4782070	False	NM_001350,NM_001185181	chr6_mcf_hap5,chr6_mcf_hap5	-,+	DAXX,PFDN6	-17400,-50839
chr6:33308061-33309103	chr6_cox_hap2	+	4752076	4752139	False	NM_001350,NM_001185181	chr6_cox_hap2,chr6_cox_hap2	-,+	DAXX,PFDN6	-17465,-50911
chr6:33308061-33309103	chr6	+	33308189	33308324	True	NR_024517,NM_001185181	chr6,chr6	-,+	DAXX,PFDN6	-17396,-50837
chr6:33308061-33309103	chr6_dbb_hap3	+	4589584	4589647	False	NM_001350,NM_001185181	chr6_dbb_hap3,chr6_dbb_hap3	-,+	DAXX,PFDN6	-17464,-50907
chr5:10248002-10249104	chr5	+	10248085	10249067	True	NM_199133,NM_012073	chr5,chr5	-,+	FAM173B,CCT5	997,1214
chr9:86241453-86241694	chr9	+	86241610	86241742	True	NM_001190727,NM_013438,NM_001001551	chr9,chr9,chr9	+,-,+	C9orf103,UBQLN1,C9orf103	-3628,81476,-3628
chr1:196577998-196578705	chr1	+	196578175	196578700	True	NM_198503,NM_001014975	chr1,chr1	-,+	KCNT2,CFH	-676,42307
chr1:91483386-91485218	chr1	+	91483739	91484770	True	NM_016620,NM_001134419,NM_201269,NM_032186	chr1,chr1,chr1,chr1	-,+,-,-	ZNF644,CDC7,ZNF644,ZNF644	2316,481633,2957,2957
chr10:48847866-48848642	chr10	+	48847875	48848684	True	NR_033172,NM_153034	chr10,chr10	-,+	FRMPD2P1,ZNF488	14054,-492838
chr10:48847866-48848642	chr10	+	46660974	46661783	False	NR_027632,NM_015605	chr10,chr10	+,-	FAM35B,PTPN20B	235857,-19971
chr10:48847866-48848642	chr10	+	49368440	49369249	False	NR_033172,NM_002750	chr10,chr10	-,+	FRMPD2P1,MAPK8	14041,240437
chr13:49550989-49552128	chr13	+	49550996	49552082	True	NM_030925,NM_001079673	chr13,chr13	-,+	CAB39L,FNDC3A	423703,-999
chr9:140035606-140036017	chr9	+	140035689	140036007	True	NM_000832,NM_013379,NM_007327,NM_021569,NM_001185090,NM_001185091	chr9,chr9,chr9,chr9,chr9,chr9	+,-,+,+,+,+	GRIN1,DPP7,GRIN1,GRIN1,GRIN1,GRIN1	-2131,-26494,-2131,-2131,-2131,-2131
chr4:46726274-46726514	chr7	-	6426844	6426896	True	NM_018890,NM_001037163	chr7,chr7	+,-	RAC1,C7orf70	-12771,-38254
chr4:46726274-46726514	chr4	+	46726282	46726416	False	NM_130902,NM_000812	chr4,chr4	-,+	COX7B2,GABRB1	184886,306878
chr6:36356089-36356556	chr6	+	36356202	36356296	True	NM_016135,NM_173562	chr6,chr6	-,+	ETV7,KCTD20	-735,54247
chr10:122215257-122215733	chr10	+	122215376	122215770	True	NM_001030059,NR_033850	chr10,chr10	+,-	PPAPDC1A,LOC283089	695,394971
chr18:61233925-61234669	chr18	+	61233969	61234646	True	NM_080474,NM_002974	chr18,chr18	+,-	SERPINB12,SERPINB4	-10628,76907
chrX:140335348-140335864	chrX	+	140335614	140335806	True	NM_022661,NM_145664	chrX,chrX	-,+	SPANXC,SPANXB2	890,-238915
chrX:140335348-140335864	chrX	-	140085660	140085710	False	NM_032461,NR_031725,NM_145664,NM_139019	chrX,chrX,chrX,chrX	+,-,+,+	SPANXB1,MIR320D2,SPANXB2,SPANXF1	-955,-77276,-955,-955
chrX:140335348-140335864	chrX	-	140097665	140097715	False	NM_032461,NR_031725,NM_145664,NM_139019	chrX,chrX,chrX,chrX	+,-,+,+	SPANXB1,MIR320D2,SPANXB2,SPANXF1	-955,-89281,-955,-955
chrX:140335348-140335864	chrX	+	140785590	140785669	False	NM_032417,NM_013453,NM_145665	chrX,chrX,chrX	-,+,-	SPANXD,SPANXA1,SPANXE	986,-107791,1043
chrX:140335348-140335864	chrX	+	140671824	140671907	False	NM_013453,NM_145662	chrX,chrX	-,-	SPANXA1,SPANXA2	986,1010
chrX:140335348-140335864	chrX	-	140678787	140678870	False	NM_013453,NM_145662	chrX,chrX	+,+	SPANXA1,SPANXA2	-986,-1010
chr19:51014293-51014499	chr19	+	51014305	51014509	True	NM_138334,NM_001024656,NM_001114598,NM_206538	chr19,chr19,chr19,chr19	-,-,-,+	JOSD2,ASPDH,ASPDH,C19orf63	40,3488,2683,-34620
chr11:125773731-125774049	chr11	+	125773731	125774013	True	NM_031307,NM_013264	chr11,chr11	-,+	PUS3,DDX25	-615,258
chr2:209053359-209054679	chr2	+	209053739	209054641	True	NM_001178000,NM_001099334	chr2,chr2	+,-	PIKFYVE,C2orf80	76349,182
chr19:49568546-49568761	chr19	+	49568706	49568766	True	NM_031886,NM_006179,NM_033142,NM_003089	chr19,chr19,chr19,chr19	-,-,-,+	KCNA7,NTF4,CGB7,SNRNP70	7482,-1582,-9709,19698
chr13:33113329-33114131	chr13	+	33113329	33114043	True	NM_014887,NM_015032,NM_033111	chr13,chr13,chr13	-,+,-	N4BP2L2,PDS5B,N4BP2L2	-397,46520,-393
chr8:53623813-53624508	chr8	+	53623946	53624372	True	NM_014781,NM_001083617,NM_005285	chr8,chr8,chr8	-,-,+	RB1CC1,RB1CC1,NPBWR1	2704,2704,228095
chr11:796605-796989	chr11	+	796618	797024	True	NM_145887,NM_145886,NM_024698,NM_001191060,NM_001191061,NM_001004,NM_016564	chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,-,+,-	LRDD,LRDD,SLC25A22,SLC25A22,SLC25A22,RPLP2,CEND1	8276,8276,-355,1021,1295,12911,-6492
chr16:75679716-75681266	chr16	+	75679808	75681240	True	NM_005548,NM_001130089,NM_018975	chr16,chr16,chr16	-,-,+	KARS,KARS,TERF2IP	395,395,394
chr8:128749368-128749731	chr8	+	128749411	128749613	True	NM_002467,NR_024393	chr8,chr8	+,-	MYC,LOC727677	-1147,-255027
chr6:96025380-96025634	chr6	+	96025448	96025650	True	NM_001143957,NM_024641	chr6,chr6	-,+	GPR63,MANEA	1259753,-86
chrX:102531153-102531585	chrX	+	102531162	102531573	True	NM_152278,NM_001012979	chrX,chrX	+,-	TCEAL7,TCEAL5	53540,274
chr7:129252333-129252997	chr7	+	129252355	129253037	True	NR_029614,NM_005011	chr7,chr7	-,+	MIR182,NRF1	157345,-851
chr20:10366495-10368381	chr20	+	10366496	10368239	True	NM_001009608,NM_018848	chr20,chr20	+,-	C20orf94,MKKS	47711,44383
chr16:3014825-3015031	chr16	+	3014834	3014992	True	NM_172229,NM_152341,NM_004203,NM_024507	chr16,chr16,chr16,chr16	+,+,-,+	KREMEN2,PAQR4,PKMYT1,KREMEN2	-668,4349,15598,-668
chr19:3049902-3050398	chr19	+	3050184	3050302	True	NM_001144761,NM_002067	chr19,chr19	-,+	TLE2,GNA11	-2551,44105
chr2:36939900-36940490	chr2	+	36940056	36940526	True	NM_053276,NM_005102	chr2,chr2	+,-	VIT,FEZ2	-16283,-114724
chr3:42700647-42700947	chr3	+	42700651	42700895	True	NM_145166,NR_027753	chr3,chr3	+,-	ZBTB47,HHATL	-5526,42168
chr10:16482343-16483530	chr10	+	16482579	16483555	True	NM_001001484,NM_001010908,NM_030664	chr10,chr10,chr10	+,-,+	PTER,C1QL3,PTER	-3663,80499,-3663
chr9:71938680-71939433	chr9	+	71938847	71939433	True	NM_001127608,NM_004816,NM_002732	chr9,chr9,chr9	+,+,-	FAM189A2,FAM189A2,PRKACG	54,4807,-309808
chr16:31539585-31540256	chr16	+	31539622	31540280	True	NM_022744,NM_016633	chr16,chr16	-,+	C16orf58,AHSP	-19916,-470
chr17:74724209-74724786	chr17	+	74724331	74724835	True	NR_036608,NM_001080510,NR_030366,NM_001081461,NM_003016,NM_024311,NM_001195427,NM_015167	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,-,-,-,+,-,-	SRSF2,METTL23,MIR636,JMJD6,SRSF2,MFSD11,SRSF2,JMJD6	8708,-1436,7845,-1450,8708,8947,8708,-1450
chr12:6486376-6486667	chr12	+	6486379	6486633	True	NM_001159576,NM_002342,NM_001159575,NM_001038	chr12,chr12,chr12,chr12	-,+,-,-	SCNN1A,LTBR,SCNN1A,SCNN1A	-1989,6723,50,-1474
chr1:118471373-118472020	chr1	+	118471377	118471953	True	NM_001135589,NM_006784,NM_017686	chr1,chr1,chr1	-,+,-	GDAP2,WDR3,GDAP2	399,418,399
chr19:57661406-57662464	chr19	+	57661625	57662239	True	NM_020903,NM_052882	chr19,chr19	+,-	USP29,ZIM3	-30168,-5055
chr17:7195665-7196189	chr17	+	7195755	7196168	True	NM_001042,NM_015982	chr17,chr17	+,-	SLC2A4,YBX2	-10752,1758
chr20:42544978-42545208	chr20	+	42545101	42545249	True	NM_176791,NM_032883,NM_001098796,NM_001098797	chr20,chr20,chr20,chr20	-,+,+,+	GTSF1L,TOX2,TOX2,TOX2	-189459,-370,-370,-1660
chr1:49244847-49245679	chr1	+	49244850	49245226	True	NM_024603,NM_001135181	chr1,chr1	-,+	BEND5,SLC5A9	-2303,-556544
chr3:194122719-194122990	chr3	+	194122858	194122918	True	NR_033929,NM_004488	chr3,chr3	+,-	FLJ34208,GP5	84950,-2863
chrX:89172924-89173690	chrY	+	3443324	3443595	False	NM_003140,NM_139214	chrY,chrY	-,+	SRY,TGIF2LY	-787532,3530
chrX:89172924-89173690	chrX	+	89173122	89173559	True	NM_138960,NM_004538	chrX,chrX	+,-	TGIF2LX,NAP1L3	3380,3755184
chr2:111435721-111436163	chr2	+	111435781	111436165	True	NM_004336,NM_001142807	chr2,chr2	-,+	BUB1,ACOXL	-97,53984
chr19:292622-293714	chr19	+	292824	293751	True	NM_003712,NM_177543,NM_001005240,NM_177526	chr19,chr19,chr19,chr19	-,-,+,-	PPAP2C,PPAP2C,OR4F17,PPAP2C	-1389,-1655,-182197,-1389
chr10:43968646-43969057	chr10	+	43968812	43968938	True	NR_026693,NM_001098204	chr10,chr10	+,-	ZNF487P,HNRNPF	-36289,-64116
chr12:133559246-133559693	chr12	+	133559541	133559741	True	NM_019591,NM_001164715	chr12,chr12	+,-	ZNF26,ZNF605	3314,-26649
chr2:178061586-178062531	chr2	+	178061810	178062078	True	NM_194247,NR_036075	chr2,chr2	+,-	HNRNPA3,MIR3128	15343,58718
chr7:84872729-84874005	chr7	+	84872751	84873920	True	NM_000840,NM_152754	chr7,chr7	+,-	GRM3,SEMA3D	1399309,-121504
chr5:145826021-145826647	chr5	+	145826218	145826670	True	NM_006706,NM_001040006,NM_194251	chr5,chr5,chr5	+,+,-	TCERG1,TCERG1,GPR151	202,202,69056
chr5:176038023-176038513	chr5	+	176038045	176038537	True	NM_001099408,NM_052899	chr5,chr5	+,-	EIF4E1B,GPRIN1	19145,-914
chr1:120315804-120316834	chr1	+	120315862	120316779	True	NM_001166107,NM_006623,NM_005518	chr1,chr1,chr1	-,+,-	HMGCS2,PHGDH,HMGCS2	-4307,-61494,-4307
chr17:79857581-79857804	chr17	+	79857623	79857687	True	NM_016476,NM_005782,NM_001002249,NM_001002248,NM_001002247,NM_001002246,NM_001002245,NM_001002244,NM_148896	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,-,+,+,+,+,+,+,+	ANAPC11,THOC4,ANAPC11,ANAPC11,ANAPC11,ANAPC11,ANAPC11,ANAPC11,NPB	-8075,-8161,-7856,-8075,-8075,-8075,-8075,-8075,2384
chr7:128469920-128470239	chr7	+	128470017	128470207	True	NM_001127487,NM_001708,NM_001458	chr7,chr7,chr7	+,-,+	FLNC,OPN1SW,FLNC	275,-54173,275
chr3:147129331-147129604	chr3	+	147129405	147129570	True	NM_001168378,NM_001168379,NM_003412,NM_032153	chr3,chr3,chr3,chr3	-,-,+,-	ZIC4,ZIC4,ZIC1,ZIC4	-7334,-6098,-2284,-4998
chr1:50647648-50648620	chr1	+	50647663	50648513	True	NM_032785,NM_021952	chr1,chr1	-,+	AGBL4,ELAVL4	-158037,-73130
chr3:43698334-43698896	chr3	+	43698718	43698918	True	NM_001204834,NM_016006	chr3,chr3	-,+	ANO10,ABHD5	-35158,33456
chr13:52584398-52585560	chr13	+	52584403	52585278	True	NM_001005918,NM_000053,NR_036571,NM_001004127	chr13,chr13,chr13,chr13	-,-,+,+	ATP7B,ATP7B,ALG11,ALG11	403,403,1244,1244
chr4:183245776-183246528	chr4	+	183245800	183246543	True	NM_001080477,NR_027107	chr4,chr4	+,-	ODZ3,MGC45800	-714,-180132
chr12:80870281-80871397	chr12	+	80870478	80871319	True	NR_030348,NM_001145026	chr12,chr12	-,+	MIR617,PTPRQ	355147,-32411
chr2:208396933-208397570	chr2	+	208397400	208397463	True	NM_004379,NM_134442,NM_145280	chr2,chr2,chr2	+,+,-	CREB1,CREB1,METTL21A	-2837,-2837,92286
chr17:78121843-78122543	chr17	+	78121888	78122246	True	NM_024110,NM_014740	chr17,chr17	+,-	CARD14,EIF4A3	30034,-906
chrX:40145191-40146152	chrX	+	40145205	40145795	True	NM_001123384,NM_005765	chrX,chrX	-,+	BCOR,ATP6AP2	-108623,294420
chr5:88185223-88185488	chr5	+	88185296	88185530	True	NM_006467,NM_002397,NM_001193350	chr5,chr5,chr5	+,-,-	POLR3G,MEF2C,MEF2C	1585150,-6013,-6013
chr15:75115664-75115891	chr15	+	75115677	75115880	True	NM_001030005,NM_001099436	chr15,chr15	+,-	CPLX3,ULK3	3070,19723
chr12:108710405-108710611	chr12	+	108710449	108710647	True	NM_001142345,NM_014653	chr12,chr12	-,+	CMKLR1,WSCD2	3842,-186991
chr5:43299674-43301536	chr5	+	43300253	43301526	True	NM_153361,NM_001098272	chr5,chr5	+,-	MGC42105,HMGCS1	-107977,12127
chr6:43739849-43740748	chr6	+	43740061	43740457	True	NM_018135,NM_001025369,NM_001025368,NM_001025367,NM_001025366,NM_001033756,NM_001025370,NM_003376,NM_001171624,NM_001171625,NM_001171626,NM_001171627,NM_001171622,NM_001171623,NM_001204384,NM_001204385,NM_001171628,NM_001171629,NM_001171630	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+	MRPS18A,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA	-84512,-2166,-2166,-2166,-2166,-2166,-2166,-2166,-2166,-2166,-2166,-2166,-2166,-2166,-2166,-2166,-2166,-2166,-2166
chr1:186424382-186424813	chr1	+	186424384	186424714	True	NM_002597,NM_022375,NM_022576	chr1,chr1,chr1	-,+,-	PDC,OCLM,PDC	5577,-54738,-6528
chr17:40915294-40916083	chr17	+	40915407	40915683	True	NR_024462,NR_024461,NM_032353,NM_005854	chr17,chr17,chr17,chr17	-,-,+,+	LOC100190938,LOC100190938,VPS25,RAMP2	-2132,-2132,9770,-2246
chr8:11325580-11326021	chr8	+	11325584	11326070	True	NM_001715,NM_053279	chr8,chr8	+,-	BLK,FAM167A	25450,-1308
chr8:67344822-67345261	chr8	+	67344868	67345296	True	NM_001080416,NM_015169,NM_144650	chr8,chr8,chr8	-,+,+	MYBL1,RRS1,ADHFE1	180234,-3656,-201
chr11:130787395-130789272	chr11	+	130787498	130789003	True	NM_001048209,NM_014758	chr11,chr11	+,-	NTM,SNX19	451367,-1116
chr9:124856702-124856980	chr9	+	124856953	124857021	True	NM_001139442,NM_194252,NM_198469	chr9,chr9,chr9	-,-,+	TTLL11,TTLL11,MORN5	-1068,-1068,65168
chr4:108913991-108915287	chr4	+	108914365	108915325	True	NM_005327,NM_001166119,NM_001184705	chr4,chr4,chr4	+,-,+	HADH,LEF1,HADH	-3546,172679,-3546
chr11:62689120-62689424	chr11	+	62689316	62689406	True	NR_037193,NM_000738	chr11,chr11	+,-	SLC3A2,CHRM1	-40196,-304
chr16:2096827-2097440	chr16	+	2096987	2097479	True	NM_002528,NM_001077183,NM_001114382,NM_000548	chr16,chr16,chr16,chr16	-,+,+,+	NTHL1,TSC2,TSC2,TSC2	438,510,510,510
chr2:98964434-98964689	chr2	+	98964439	98964667	True	NM_001008215,NM_001298,NM_001079878	chr2,chr2,chr2	-,+,+	C2orf64,CNGA3,CNGA3	260338,-1872,-1872
chr1:86860824-86861425	chr1	+	86860889	86861451	True	NM_001184765,NM_001184766,NM_006536,NM_020729,NM_001007022	chr1,chr1,chr1,chr1,chr1	-,-,+,-,-	ODF2L,ODF2L,CLCA2,ODF2L,ODF2L	624,624,28317,624,624
chrX:41955726-41956847	chrX	+	41955782	41956815	True	NM_003688,NM_080817	chrX,chrX	-,+	CASK,GPR82	-173495,-372425
chr19:14202878-14203202	chr19	+	14202936	14203136	True	NR_024282,NM_138352	chr19,chr19	+,-	LOC113230,SAMD1	-19166,-1704
chr6:43400440-43400709	chr6	+	43400470	43400620	True	NM_023932,NM_033450,NM_001198934	chr6,chr6,chr6	-,+,+	DLK2,ABCC10,ABCC10	22716,-1032,-5229
chr1:62786090-62786499	chr1	+	62786238	62786468	True	NM_181712,NM_001017415	chr1,chr1	-,+	KANK4,USP1	-1155,115506
chr12:13105199-13105590	chr12	+	13105207	13105469	True	NM_018654,NR_030345	chr12,chr12	-,+	GPRC5D,MIR614	-1889,-36502
chr3:129262391-129262624	chr3	+	129262422	129262636	True	NM_153833,NM_015103	chr3,chr3	+,-	H1FOO,PLXND1	-416,62996
chr1:46570522-46571416	chr1	+	46570629	46571379	True	NM_003629,NM_005727	chr1,chr1	-,+	PIK3R3,TSPAN1	27051,69369
chr4:119274840-119275338	chr4	+	119274889	119275347	True	NR_002963,NM_003619	chr4,chr4	+,-	SNORA24,PRSS12	-74595,-967
chr15:25489227-25489511	chr15	+	25489237	25489317	True	NR_003344,NR_003358,NM_130838,NR_003353,NR_003352,NR_003351,NR_003350,NR_003357,NR_003356,NR_003355,NR_003354,NR_003302,NR_003303,NR_003359	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,-,+,+,+,+,+,+,+,+,+,+,+	SNORD115-29,SNORD115-43,UBE3A,SNORD115-38,SNORD115-37,SNORD115-36,SNORD115-35,SNORD115-42,SNORD115-41,SNORD115-40,SNORD115-39,SNORD115-10,SNORD115-11,SNORD115-44	5027,5027,161386,-4303,-6155,5027,-9894,3174,1307,-527,-2395,3174,5027,6688
chr12:118575031-118575327	chr12	+	118575065	118575371	True	NM_002567,NM_019086	chr12,chr12	+,-	PEBP1,VSIG10	-1246,-33255
chr11:67083487-67084123	chr11	+	67083490	67083932	True	NM_021173,NR_024469	chr11,chr11	-,+	POLD4,LOC100130987	37177,1377
chr16:68004185-68005060	chr16	+	68004599	68005110	True	NM_001129758,NM_001145962,NM_001145963,NM_001145964,NM_001145961,NM_005072,NM_017803,NM_022357	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	-,-,-,-,-,-,+,-	DPEP3,SLC12A4,SLC12A4,SLC12A4,SLC12A4,SLC12A4,DUS2L,DPEP3	9393,-2002,-6631,-3818,-2002,-2002,52093,9393
chrX:148792471-148793362	chrX	+	148792751	148793277	True	NM_032508,NM_005366	chrX,chrX	-,+	TMEM185A,MAGEA11	-79264,460
chr19:38209813-38210210	chr19	+	38209817	38210155	True	NM_001172226,NM_001172677,NM_032689	chr19,chr19,chr19	+,-,-	ZNF540,ZNF607,ZNF607	-124137,-16,586
chr4:57252067-57252679	chr4	+	57252415	57252510	True	NM_006452,NM_181806	chr4,chr4	+,-	PAICS,AASDH	49404,1185
chr11:64645683-64645890	chr11	+	64645688	64645918	True	NM_006795,NM_006244	chr11,chr11	-,+	EHD1,PPP2R5B	323,46224
chr21:43786725-43786995	chr21	+	43786778	43787022	True	NM_003225,NM_001001895	chr21,chr21	-,+	TFF1,UBASH3A	-134,36996
chr19:22015472-22017013	chr19	+	22015770	22016523	True	NR_024523,NM_003423	chr19,chr19	+,-	LOC641367,ZNF43	-82285,2501
chr2:242751693-242752128	chr2	+	242751708	242752096	True	NM_001167599,NM_005018,NM_080741,NM_001167601,NM_001167600,NM_001167602	chr2,chr2,chr2,chr2,chr2,chr2	+,-,+,+,+,+	NEU4,PDCD1,NEU4,NEU4,NEU4,NEU4	-67,49012,-67,-1599,-1599,-67
chrY:24455054-24456026	chrY	+	24455291	24455779	True	NR_001541,NR_002193,NM_152585	chrY,chrY,chrY	-,+,+	TTTY5,RBMY2FP,RBMY1F	-10268,-341,-337
chr5:131591551-131592496	chr5	+	131591555	131592443	True	NM_001131027,NM_001142599,NM_003687	chr5,chr5,chr5	+,-,+	PDLIM4,P4HA2,PDLIM4	907,-27999,907
chr6:125284478-125286439	chr6	+	125284667	125286323	True	NR_026876,NM_152553	chr6,chr6	-,+	STL,RNF217	-494,18190
chr7:5631301-5631771	chr7	+	5631368	5631786	True	NM_001101,NM_003088	chr7,chr7	-,+	ACTB,FSCN1	-61136,667
chr3:53197260-53199088	chr3	+	53197469	53198807	True	NM_006254,NM_052859,NM_212539	chr3,chr3,chr3	+,-,+	PRKCD,RFT1,PRKCD	-2297,-32999,-2297
chr3:47054678-47055994	chr3	+	47054924	47056023	True	NR_024046,NM_144716	chr3,chr3	+,-	NRADDP,CCDC12	-1943,-36654
chr16:66642641-66643130	chr16	+	66642672	66642978	True	NM_181553,NM_144601,NR_037619,NM_004614,NR_037613	chr16,chr16,chr16,chr16,chr16	+,+,+,-,+	CMTM3,CMTM3,CMTM3,TK2,CMTM3	-4156,-4495,-4089,-58357,-4788
chr15:90808046-90808500	chr15	+	90808060	90808492	True	NM_001033088,NR_028052,NM_006384	chr15,chr15,chr15	+,+,-	NGRN,NGRN,CIB1	402,402,-30781
chr9:34566492-34567374	chr9	+	34566697	34567245	True	NR_024369,NM_001842	chr9,chr9	+,-	LOC415056,CNTFR	764,22527
chr8:6733266-6734865	chr8	+	6733286	6734672	True	NM_005218,NM_018361	chr8,chr8	-,+	DEFB1,AGPAT5	907,-167459
chr16:71560348-71560897	chr16	+	71560404	71560922	True	NM_001166395,NM_005769,NM_006961	chr16,chr16,chr16	+,+,-	CHST4,CHST4,ZNF19	-301,-432,-37150
chr20:45316176-45317039	chr20	+	45316510	45317016	True	NM_030777,NM_001011554,NM_001193340,NM_033550	chr20,chr20,chr20,chr20	+,-,-,-	SLC2A10,SLC13A3,SLC13A3,TP53RK	21262,-3386,-3386,1310
chr17:36612056-36613312	chr17	+	36612269	36613151	True	NM_001004334,NM_001199417	chr17,chr17	-,+	GPR179,ARHGAP23	-112576,-27600
chr12:53242473-53242693	chr12	+	53242582	53242742	True	NM_173352,NM_199187	chr12,chr12	-,+	KRT78,KRT18	86,99912
chr15:49170483-49170731	chr15	+	49170635	49170779	True	NM_014335,NM_014985	chr15,chr15	+,-	EID1,CEP152	-396,-67292
chr18:74843396-74843663	chr18	+	74843456	74843532	True	NM_001480,NM_001025101,NM_001025100	chr18,chr18,chr18	+,-,-	GALR1,MBP,MBP	118475,1292,1292
chr10:66585911-66586160	chr10	+	66585936	66586062	True	NR_001446,NM_032776	chr10,chr10	+,-	ANXA2P3,JMJD1C	-702,-1360214
chr16:49863037-49863910	chr16	+	49863037	49863819	True	NM_153261,NM_015069	chr16,chr16	+,-	TMEM188,ZNF423	195369,-2119
chr18:19329760-19330718	chr18	+	19329889	19330103	True	NM_138340,NM_020774	chr18,chr18	-,+	ABHD3,MIB1	-45123,-8397
chr17:73105354-73105720	chr17	+	73105354	73105702	True	NM_014595,NM_024585	chr17,chr17	-,+	NT5C,ARMC7	22225,379
chr17:73894725-73894969	chr17	+	73894863	73894969	True	NM_173547,NM_001113324,NM_032478	chr17,chr17,chr17	-,+,-	TRIM65,C17orf106,MRPL38	-1809,80328,6262
chr22:30684946-30685200	chr22	+	30685069	30685179	True	NM_001037666,NM_001017437	chr22,chr22	-,+	GATSL3,CCDC157	487,67447
chr18:77157164-77157421	chr18	+	77157188	77157386	True	NM_006162,NM_172388,NM_172389,NM_172387,NM_001146343,NM_172390	chr18,chr18,chr18,chr18,chr18,chr18	+,+,+,+,-,+	NFATC1,NFATC1,NFATC1,NFATC1,PQLC1,NFATC1	-1468,-1468,2939,2939,554317,-1468
chr19:12148178-12149487	chr19	+	12148191	12148920	True	NM_001136501,NM_001080411	chr19,chr19	+,-	ZNF844,ZNF433	26625,-1666
chr3:185545710-185547047	chr3	+	185545795	185547024	True	NM_006548,NM_001007225,NR_027317	chr3,chr3,chr3	-,-,+	IGF2BP2,IGF2BP2,C3orf65	-2968,-2968,-114811
chr19:39371093-39371871	chr19	+	39371101	39371833	True	NM_198445,NM_001001716,NM_001195833	chr19,chr19,chr19	-,+,-	RINL,NFKBIB,RINL	-2182,18781,-2182
chr2:113191257-113191594	chr2	+	113191275	113191594	True	NM_153712,NM_005054,NM_001164463	chr2,chr2,chr2	+,-,-	TTL,RGPD5,RGPD8	48148,-168,-53
chr2:113191257-113191594	chr2	-	110551507	110551663	False	NM_178584,NM_001123363,NM_001037866,NM_032260,NM_005054	chr2,chr2,chr2,chr2,chr2	-,+,+,+,+	SEPT10,RGPD6,RGPD6,RGPD5,RGPD5	-179724,-1227,-1227,-1227,302
chr2:113191257-113191594	chr2	+	111334980	111335136	False	NM_001142807,NM_001037866,NM_001123363,NM_032260,NM_005054	chr2,chr2,chr2,chr2,chr2	+,-,-,-,-	ACOXL,RGPD6,RGPD6,RGPD5,RGPD5	155013,1227,1227,1227,-302
chr1:27818428-27819058	chr1	+	27818461	27819107	True	NM_005281,NM_001201404,NM_006990	chr1,chr1,chr1	+,-,-	GPR3,WASF2,WASF2	-99360,-1783,-1783
chr1:36946868-36947934	chr1	+	36947139	36947983	True	NM_000760,NM_024676,NM_172313,NM_156039	chr1,chr1,chr1,chr1	-,+,-,-	CSF3R,SH3D21,CSF3R,CSF3R	982,-174483,982,982
chr18:24129059-24129390	chr18	+	24129239	24129359	True	NM_001136205,NR_026908,NM_001142730	chr18,chr18,chr18	-,+,-	KCTD1,C18orf16,KCTD1	90,315912,-739
chr1:114428636-114429813	chr1	+	114428926	114429491	True	NM_001010922,NM_022836	chr1,chr1	-,+	BCL2L15,DCLRE1B	731,18423
chr3:47517873-47518298	chr3	+	47518098	47518200	True	NM_012235,NM_015466	chr3,chr3	-,+	SCAP,PTPN23	-653,-95658
chr15:101150622-101151775	chr15	+	101150778	101151253	True	NM_198243,NM_001040616,NM_024708	chr15,chr15,chr15	+,-,+	ASB7,LINS,ASB7	-8082,-8333,-8082
chr12:40493999-40494485	chr12	+	40494011	40494425	True	NM_052885,NM_198578	chr12,chr12	-,+	SLC2A13,LRRK2	5294,124387
chr1:2519435-2519659	chr1	+	2519498	2519704	True	NR_036637,NM_001195741,NM_001195740,NR_037844,NR_036638,NM_001195738,NM_152371,NM_001195736,NM_001195737	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,-,+,+,+,+,+	C1orf93,C1orf93,C1orf93,LOC100133445,C1orf93,C1orf93,C1orf93,C1orf93,C1orf93	-1650,-1360,-1360,-31048,-1650,-1360,-1360,-1360,-1360
chr8:144372649-144372992	chr8	+	144372761	144372977	True	NM_030895,NM_052963	chr8,chr8	+,-	ZNF696,TOP1MT	581,44123
chr8:145754864-145755262	chr8	+	145755054	145755144	True	NM_001001795,NM_001024678,NM_014665	chr8,chr8,chr8	-,-,+	C8orf82,LRRC24,LRRC14	-596,-2638,-11750
chr15:44724074-44724608	chr15	+	44724211	44724500	True	NR_034171,NM_016396	chr15,chr15	-,+	LOC645212,CTDSPL2	104661,-4683
chr9:135544248-135544937	chr9	+	135544383	135544981	True	NM_022779,NM_012204,NM_138620	chr9,chr9,chr9	-,+,-	DDX31,GTF3C4,DDX31	857,746,857
chr7:75511796-75512519	chr7	+	75512062	75512548	True	NM_001040456,NM_001040457,NM_002991	chr7,chr7,chr7	+,+,-	RHBDD2,RHBDD2,CCL24	-3802,-3802,-69029
chr5:132208286-132208556	chr5	+	132208309	132208466	True	NM_014402,NM_052971,NM_005260	chr5,chr5,chr5	+,+,-	UQCRQ,LEAP2,GDF9	-6049,891,-7832
chr21:42543380-42544811	chr21	+	42543453	42544805	True	NM_182832,NM_138991,NR_036167,NM_012105,NM_138992	chr21,chr21,chr21,chr21,chr21	-,+,+,+,+	PLAC4,BACE2,MIR3197,BACE2,BACE2	12411,-3777,-4021,-3777,-3777
chr15:76628383-76628826	chr15	+	76628447	76628810	True	NM_001127716,NM_145805	chr15,chr15	-,+	ETFA,ISL2	-24637,336
chr11:47573280-47573856	chr11	+	47573671	47573887	True	NM_001143984,NM_006560	chr11,chr11	+,-	PTPMT1,CELF1	13094,955
chr8:109474329-109475054	chr8	+	109474362	109474849	True	NM_001568,NM_014673	chr8,chr8	-,+	EIF3E,TTC35	-213403,-18562
chr19:51671374-51671576	chr19	+	51671373	51671565	True	NR_002804,NM_145232	chr19,chr19	+,-	SIGLECP3,CTU1	-839,-59726
chr1:152799136-152800090	chr1	+	152799135	152799653	True	NM_178351,NM_178348	chr1,chr1	-,+	LCE1C,LCE1A	-20028,295
chr19:53139419-53140067	chr19	+	53139660	53139886	True	NM_001105551,NM_001105550,NM_001105553,NM_001105552,NM_001105554,NM_018300,NR_023311,NM_001105549	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,+,-	ZNF83,ZNF83,ZNF83,ZNF83,ZNF83,ZNF83,ZNF137P,ZNF83	1818,1818,1818,1818,1818,1818,-39775,1818
chr11:505177-505395	chr11	+	505264	505443	True	NM_002939,NM_198075,NM_203389,NM_203388,NM_203387,NM_203386,NM_203385,NM_203384,NM_203383	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,+,-,-,-,-,-,-,-	RNH1,LRRC56,RNH1,RNH1,RNH1,RNH1,RNH1,RNH1,RNH1	1429,32078,1881,1881,1881,1881,1429,1429,1429
chr5:22815934-22816392	chr5	+	22816089	22816436	True	NR_003921,NM_004061	chr5,chr5	+,-	PMCHL1,CDH12	-673679,37345
chr7:65216168-65216388	chr7	+	65216290	65216416	True	NR_003110,NM_000181,NR_002961	chr7,chr7,chr7	+,-,+	CCT6P1,GUSB,SNORA22	-249,230935,4096
chr19:16939164-16939977	chr19	+	16939303	16939854	True	NM_024104,NM_015260	chr19,chr19	-,+	C19orf42,SIN3B	-168335,363
chr9:131421094-131421510	chr9	+	131421305	131421492	True	NM_001122821,NM_052844	chr9,chr9	+,-	SET,WDR34	24441,-2176
chr1:109615881-109616196	chr1	+	109616077	109616137	True	NM_020141,NM_005645	chr1,chr1	+,-	TMEM167B,TAF13	17265,2537
chr10:22724868-22725426	chr10	+	22724919	22725460	True	NM_172242,NR_036533	chr10,chr10	+,-	SPAG6,LOC100499489	-90571,1448
chr5:57877811-57878777	chr5	+	57877826	57878562	True	NM_006622,NM_138453	chr5,chr5	-,+	PLK2,RAB3C	-121913,376
chr1:33280805-33281430	chr1	+	33281070	33281419	True	NM_022753,NM_001017406,NM_003680	chr1,chr1,chr1	+,+,-	S100PBP,S100PBP,YARS	1756,1756,2265
chr1:78443132-78443581	chr1	+	78443220	78443632	True	NM_007034,NM_003902	chr1,chr1	+,-	DNAJB4,FUBP1	27003,1200
chr12:110723431-110723769	chr12	+	110723430	110723679	True	NM_001135765,NM_170665,NM_001681,NM_016238	chr12,chr12,chr12,chr12	+,+,+,-	ATP2A2,ATP2A2,ATP2A2,ANAPC7	-4449,-4449,-4449,117913
chr15:77130247-77131156	chr15	+	77130778	77131172	True	NM_002902,NM_001145923	chr15,chr15	+,-	RCN2,SCAPER	92789,23163
chr1:247874116-247875355	chr1	+	247874194	247875292	True	NM_001005286,NM_001001914	chr1,chr1	-,+	OR6F1,OR2G3	815,-105364
chrX:19985371-19986951	chrX	+	19985481	19986469	True	NM_001173456,NM_198279	chrX,chrX	+,-	PDHA1,CXorf23	-623533,1963
chr2:43054190-43054733	chr2	+	43054410	43054720	True	NM_020744,NM_012205	chr2,chr2	+,-	MTA3,HAAO	-258790,-34659
chr9:27281739-27282488	chr9	+	27281801	27282463	True	NR_026679,NR_026687,NM_000459	chr9,chr9,chr9	-,-,+	NCRNA00032,NCRNA00032,TEK	378,378,-172706
chr15:40506032-40507690	chr15	+	40506281	40507270	True	NM_001128628,NM_001128629,NM_001039905	chr15,chr15,chr15	+,+,-	PAK6,PAK6,C15orf56	2358,2358,37890
chr4:146641713-146642634	chr4	+	146641828	146642616	True	NM_001080531,NM_178835	chr4,chr4	+,-	C4orf51,ZNF827	-40523,217041
chr7:22396699-22396972	chr7	+	22396707	22397020	True	NM_012294,NM_000600	chr7,chr7	-,+	RAPGEF5,IL6	-174,369745
chr15:23208689-23210027	chr15	+	23208887	23209350	True	NR_024074,NR_003521	chr15,chr15	+,-	GOLGA8IP,WHAMML1	45891,-530
chr15:23208689-23210027	chr15	-	28982188	28982240	False	NR_033351,NR_026589	chr15,chr15	-,+	GOLGA8F,WHAMML2	-204045,488
chr5:157100201-157100947	chr5	+	157100369	157100985	True	NM_001145132,NM_178424	chr5,chr5	+,-	C5orf52,SOX30	-1867,-20941
chr4:115520220-115520836	chr4	+	115520259	115520755	True	NM_022569,NM_001128174	chr4,chr4	-,+	NDST4,UGT8	514327,-699
chr10:17657234-17657553	chr10	+	17657276	17657574	True	NM_003473,NM_014241	chr10,chr10	+,-	STAM,PTPLA	28549,1852
chr19:47129720-47130028	chr19	+	47129927	47130075	True	NM_033258,NM_000960,NM_005184	chr19,chr19,chr19	-,-,+	GNG8,PTGIR,CALM3	7914,-1573,-25470
chr7:6587906-6588597	chr7	+	6588485	6588641	True	NM_001134387,NM_001145118	chr7,chr7	+,-	ZDHHC4,GRID2IP	28423,2476
chr2:174221391-174222127	chr2	+	174221547	174222173	True	NM_031942,NM_145810,NR_033882	chr2,chr2,chr2	+,+,-	CDCA7,CDCA7,LOC339751	-2042,-2042,-74783
chr22:38611167-38611687	chr22	+	38611218	38611486	True	NM_001161573,NM_001199562	chr22,chr22	+,-	MAFF,PLA2G6	-12242,-33382
chr19:1095287-1096194	chr19	+	1095505	1096098	True	NM_001039847,NM_002695,NM_002085,NM_001039848	chr19,chr19,chr19,chr19	+,-,+,+	GPX4,POLR2E,GPX4,GPX4	7837,-114,7837,8550
chr3:185213455-185213849	chr3	+	185213556	185213810	True	NM_080652,NM_021627	chr3,chr3	-,+	TMEM41A,SENP2	3091,90220
chr11:94300676-94301529	chr11	+	94300765	94301523	True	NM_005591,NM_152431	chr11,chr11	-,+	MRE11A,PIWIL4	-73725,-342
chr5:122759007-122759222	chr5	+	122759082	122759230	True	NM_001031812,NM_153223,NM_001166226	chr5,chr5,chr5	+,-,-	CSNK1G3,CEP120,CEP120	88562,106,106
chr18:60108774-60109176	chr18	+	60108787	60109175	True	NM_176787,NM_017742	chr18,chr18	-,+	PIGN,ZCCHC2	-254498,81482
chr1:223743531-223743745	chr1	+	223743533	223743681	True	NM_001146068,NM_001143962	chr1,chr1	+,-	CAPN2,CAPN8	145613,109805
chr1:223743531-223743745	chr9	+	138943038	138943186	False	NM_015597,NM_144653	chr9,chr9	+,-	GPSM1,NACC2	278745,43995
chr11:111782816-111783346	chr11	+	111782932	111783234	True	NR_037651,NM_001885,NM_080659,NM_001541	chr11,chr11,chr11,chr11	+,-,+,+	HSPB2-C11ORF52,CRYAB,C11orf52,HSPB2	225,-459,6366,225
chr3:9835076-9836037	chr3	+	9835099	9835879	True	NM_001024959,NM_001024960,NM_133480,NM_006354,NM_005718,NM_001198793,NM_001198780	chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,-,-,+,+,+	ARPC4,ARPC4,TADA3,TADA3,ARPC4,ARPC4-TTLL3,ARPC4	-971,-971,-679,-679,-918,-918,-349
chr19:43528992-43529982	chr19	+	43529138	43529812	True	NM_203287,NM_002785,NR_036584,NM_001113410	chr19,chr19,chr19,chr19	-,-,+,-	PSG11,PSG11,LOC100289650,PSG11	869,869,-203174,869
chr17:77031154-77032463	chr17	+	77031153	77032111	True	NM_138793,NM_198593	chr17,chr17	-,+	CANT1,C1QTNF1	-25254,-732
chr5:140475609-140475994	chr5	+	140475609	140475939	True	NM_018936,NM_018937,NM_031947	chr5,chr5,chr5	+,+,-	PCDHB2,PCDHB3,SLC25A2	-1423,4294,207723
chr2:99765559-99765996	chr2	+	99765643	99765849	True	NR_037935,NR_037936,NM_015929,NM_025244,NM_144706,NM_145197,NM_145196,NM_145199,NM_145198,NM_182911,NM_001204830	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,-,+,+,+,+,+,-,+	LIPT1,LIPT1,LIPT1,TSGA10,C2orf15,LIPT1,LIPT1,LIPT1,LIPT1,TSGA10,LIPT1	5687,5568,5568,5388,-7509,5568,5568,5568,5568,-7606,5687
chr7:140397288-140398425	chr7	+	140397400	140398338	True	NM_004546,NR_024454	chr7,chr7	+,-	NDUFB2,LOC100134713	-970,-523
chr19:5914627-5914967	chr19	+	5914626	5915006	True	NR_034166,NM_004058,NM_080590,NM_001017921	chr19,chr19,chr19,chr19	-,+,+,+	NDUFA11,CAPS,CAPS,VMAC	-10602,-484,-484,-9825
chr12:56238884-56240328	chr12	+	56238929	56240340	True	NR_036479,NM_002429	chr12,chr12	+,-	LOC440104,MMP19	-15588,-2194
chr11:77298854-77299127	chr11	+	77298955	77299044	True	NM_173039,NM_001293	chr11,chr11	+,-	AQP11,CLNS1A	1635,49860
chr14:100791610-100791823	chr14	+	100791666	100791816	True	NM_001039355,NM_207117	chr14,chr14	-,+	SLC25A29,SLC25A47	-18806,-2038
chr9:139891692-139892153	chr9	+	139891857	139892119	True	NM_004669,NM_183241	chr9,chr9	-,+	CLIC3,C9orf142	-833,-5038
chr2:166499231-166500075	chr2	+	166499407	166499965	True	NM_004482,NM_024969	chr2,chr2	-,+	GALNT3,CSRNP3	150888,-70624
chr16:87424205-87424676	chr16	+	87424318	87424686	True	NM_022818,NM_024735,NR_024568	chr16,chr16,chr16	+,-,-	MAP1LC3B,FBXO31,FBXO31	1114,-6924,1078
chr1:192141603-192143417	chr1	+	192141709	192143217	True	NM_130782,NM_001199261	chr1,chr1	+,-	RGS18,UCHL5	-14168,885367
chr16:88718459-88718816	chr16	+	88718470	88718748	True	NM_000101,NR_024402	chr16,chr16	-,+	CYBA,MGC23284	-1013,11032
chr11:93436341-93437228	chr11	+	93436569	93436901	True	NR_002569,NR_003028	chr11,chr11	+,-	SCARNA9,SNORA25	17778,26973
chr16:84221614-84222515	chr16	+	84221751	84222027	True	NM_139174,NM_139353,NM_005679,NM_001145400	chr16,chr16,chr16,chr16	+,-,-,+	ADAD2,TAF1C,TAF1C,ADAD2	2695,-1089,-1089,2695
chr16:4745389-4746274	chr16	+	4745432	4746268	True	NM_001193452,NM_032349,NM_133450	chr16,chr16,chr16	+,+,-	NUDT16L1,NUDT16L1,ANKS3	-1789,-1789,37945
chr15:100339192-100339820	chr15	+	100339226	100339856	True	NR_003260,NM_001130928	chr15,chr15	-,+	DNM1P46,MEF2A	7326,-166094
chr7:2882997-2883422	chr7	+	2883155	2883329	True	NM_133463,NM_007353	chr7,chr7	+,-	AMZ1,GNA12	-164043,680
chr1:38456603-38457222	chr1	+	38456769	38457126	True	NM_016037,NM_006802	chr1,chr1	+,-	UTP11L,SF3A3	21257,-1008
chr22:24032740-24032997	chr22	+	24032754	24033006	True	NM_153615,NR_024448	chr22,chr22	+,-	RGL4,LOC91316	41,26654
chr3:119918660-119920128	chr3	+	119918864	119919986	True	NM_001168271,NM_001168331	chr3,chr3	-,+	GPR156,NDUFB4	43206,395141
chr2:74730824-74731105	chr2	+	74730932	74731126	True	NR_024606,NM_001009812,NM_032673	chr2,chr2,chr2	+,-,-	LOC151534,LBX2,PCGF1	-1239,-489,3745
chrY:26959279-26959579	chrY	+	26959351	26959550	True	NM_020364,NM_001005375,NM_020420	chrY,chrY,chrY	-,+,-	DAZ3,DAZ4,DAZ4	139,20416,139
chrY:26959279-26959579	chrY	-	26980055	26980254	False	NM_020364,NM_020420,NM_001005375,NM_001005786,NM_001005785	chrY,chrY,chrY,chrY,chrY	+,+,+,+,+	DAZ3,DAZ4,DAZ4,DAZ2,DAZ2	-139,-139,-139,-116,-116
chrY:26959279-26959579	chrY	+	25344966	25345165	False	NM_020364,NM_020420,NM_001005375,NM_004081	chrY,chrY,chrY,chrY	+,-,-,-	DAZ3,DAZ4,DAZ4,DAZ1	20415,139,139,124
chrY:26959279-26959579	chrY	-	25365669	25365868	False	NM_020364,NM_020420,NM_001005786,NM_001005785,NM_020363	chrY,chrY,chrY,chrY,chrY	+,+,+,+,+	DAZ3,DAZ4,DAZ2,DAZ2,DAZ2	-139,-139,-116,-116,-116
chr11:698812-699122	chr11	+	698855	699147	True	NM_021008,NM_001042463,NM_174940,NM_022772	chr11,chr11,chr11,chr11	-,+,+,+	DEAF1,TMEM80,TMEM80,EPS8L2	-3115,-3290,-3290,6972
chr19:34895456-34895692	chr19	+	34895465	34895653	True	NR_027620,NM_032346	chr19,chr19	-,+	LOC643719,PDCD2L	172993,-213
chr9:6005427-6007003	chr9	+	6005653	6006937	True	NM_001017969,NR_024095,NR_024094,NM_012416,NM_005511	chr9,chr9,chr9,chr9,chr9	-,-,-,-,+	KIAA2026,RANBP6,RANBP6,RANBP6,MLANA	1116,8753,8753,8731,-114804
chr5:53663899-53665553	chr5	+	53663906	53665592	True	NM_006308,NM_019087	chr5,chr5	+,-	HSPB3,ARL15	85838,-57503
chr12:6416579-6417512	chr12	+	6416588	6417256	True	NM_001144857,NM_018173,NM_001065,NM_001144856	chr12,chr12,chr12,chr12	+,+,-,+	PLEKHG6,PLEKHG6,TNFRSF1A,PLEKHG6	4560,2345,34077,2842
chr20:46023570-46024426	chr20	+	46023737	46024157	True	NM_183048,NR_024594	chr20,chr20	-,+	ZMYND8,LOC100131496	-38263,-76546
chr9:110252356-110252613	chr9	+	110252364	110252618	True	NM_004235,NM_002874	chr9,chr9	-,+	KLF4,RAD23B	-317,-206871
chr19:6528227-6528942	chr19	+	6528281	6528834	True	NM_003811,NM_006087	chr19,chr19	+,-	TNFSF9,TUBB4	2175,-25951
chr16:15148245-15149203	chr16	+	15148337	15149126	True	NM_015027,NM_173474	chr16,chr16	+,-	PDXDC1,NTAN1	-79555,758
chr8:22011503-22012404	chr8	+	22011534	22012146	True	NM_001172357,NM_139278,NM_003018,NM_001172410	chr8,chr8,chr8,chr8	+,-,+,+	SFTPC,LGI3,SFTPC,SFTPC	7037,2248,7037,7037
chr8:97274676-97274941	chr8	+	97274793	97274973	True	NM_014754,NM_015942	chr8,chr8	+,-	PTDSS1,MTERFD1	-677,-997
chr14:56255403-56255853	chr14	+	56255600	56255841	True	NR_026796,NR_026797,NR_004844	chr14,chr14,chr14	-,-,+	C14orf34,C14orf34,RPL13AP3	7608,7608,-22688
chr3:169427093-169427322	chr11	+	111959633	111959683	True	NM_003002,NR_028383,NM_012459	chr11,chr11,chr11	+,-,-	SDHD,TIMM8B,TIMM8B	-2113,-2111,-2111
chr2:74056572-74058021	chr2	+	74056660	74057748	True	NM_201647,NM_006463,NM_003584,NM_213622	chr2,chr2,chr2,chr2	+,+,-,+	STAMBP,STAMBP,DUSP11,STAMBP	-628,-587,-49376,-567
chr17:72852094-72852711	chr17	+	72852122	72852532	True	NM_000835,NM_178160	chr17,chr17	-,+	GRIN2C,OTOP2	3525,67837
chr11:61521618-61521846	chr11	+	61521757	61521833	True	NR_026882,NM_013279,NM_001127392	chr11,chr11,chr11	-,+,+	DKFZP434K028,C11orf9,C11orf9	3353,1027,-1687
chrX:118533911-118535841	chrX	+	118534109	118535775	True	NM_145305,NR_028443	chrX,chrX	+,-	SLC25A43,LOC100303728	-902,67358
chr21:33031874-33032269	chr21	+	33031944	33032184	True	NM_000454,NM_001145444	chr21,chr21	+,-	SOD1,SCAF4	-60,72297
chr3:185656801-185657212	chr3	+	185656904	185657128	True	NM_004593,NR_033752	chr3,chr3	-,+	TRA2B,LOC344887	-980,29138
chr17:79828146-79828486	chr17	+	79828233	79828479	True	NM_001185077,NM_001002244,NM_004309,NM_001185078,NM_000918	chr17,chr17,chr17,chr17,chr17	-,+,-,-,-	ARHGDIA,ANAPC11,ARHGDIA,ARHGDIA,P4HB	361,21119,853,853,-9689
chr4:157850722-157851739	chr4	+	157850785	157851745	True	NM_000824,NM_016205	chr4,chr4	+,-	GLRB,PDGFC	145531,40855
chr7:16836795-16837402	chr7	+	16837095	16837440	True	NM_006408,NM_014399	chr7,chr7	-,+	AGR2,TSPAN13	7348,-43803
chr4:124592441-124594354	chr4	+	124592522	124594368	True	NM_198041,NR_027105	chr4,chr4	-,+	NUDT6,LOC285419	-748399,-18633
chr3:120026593-120026845	chr3	+	120026605	120026753	True	NM_001099678,NM_001168331	chr3,chr3	-,+	LRRC58,NDUFB4	41483,288374
chr5:10442871-10443454	chr5	+	10442875	10443406	True	NM_031916,NM_138809,NM_001201466	chr5,chr5,chr5	+,-,+	ROPN1L,CMBL,ROPN1L	-952,-134707,-952
chr1:48388860-48389713	chr1	+	48388921	48389749	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	72863,298607
chr4:26863150-26863428	chr4	+	26863222	26863463	True	NM_001169118,NM_001169117,NM_000730,NM_020860	chr4,chr4,chr4,chr4	+,+,-,+	STIM2,STIM2,CCKAR,STIM2	-960,-960,-371180,-960
chr4:72222809-72223751	chr4	+	72222860	72223715	True	NM_000583,NM_003759	chr4,chr4	-,+	GC,SLC4A4	426415,-18141
chr2:216974852-216975302	chr2	+	216974896	216975319	True	NM_018441,NM_021141	chr2,chr2	-,+	PECR,XRCC5	-28357,-939
chr15:52822058-52822437	chr15	+	52822103	52822433	True	NM_001142495,NM_002748,NM_000259	chr15,chr15,chr15	-,+,-	MYO5A,MAPK6,MYO5A	-856,-510743,-856
chr16:102688-103141	chr16	+	102906	103186	True	NM_016310,NM_024571	chr16,chr16	-,+	POLR3K,SNRNP25	496,642
chr7:82795745-82796596	chr7	+	82796027	82796599	True	NM_033026,NM_014510,NM_001127444	chr7,chr7,chr7	-,-,+	PCLO,PCLO,CD36	-3830,-3830,-2520323
chr1:111991954-111992171	chr1	+	111991960	111992185	True	NM_001688,NM_024102	chr1,chr1	+,-	ATP5F1,WDR77	-268,-130
chr2:113668285-113670212	chr2	+	113668474	113670148	True	NM_173204,NM_173205,NM_173202,NM_173203,NM_000576,NM_014439	chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,-,+	IL1F7,IL1F7,IL1F7,IL1F7,IL1B,IL1F7	399,2621,399,399,-74118,399
chr16:28565154-28565409	chr16	+	28565217	28565429	True	NM_138414,NM_012385	chr16,chr16	+,-	CCDC101,NUPR1	-19,-14722
chr20:45623661-45624322	chr20	+	45623886	45624296	True	NM_172110,NM_033550	chr20,chr20	+,-	EYA2,TP53RK	-100684,-305610
chr19:14248517-14248726	chr19	+	14248561	14248629	True	NR_024282,NM_018154	chr19,chr19	+,-	LOC113230,ASF1B	-64791,-1121
chr12:48167489-48168229	chr12	+	48167489	48168281	True	NM_001098531,NM_017842	chr12,chr12	-,+	RAPGEF3,SLC48A1	-14600,-573
chr1:167063359-167063899	chr1	+	167063516	167063876	True	NM_005814,NM_001080426	chr1,chr1	-,+	GPA33,DUSP27	-3648,210
chr18:56532046-56533417	chr18	+	56532197	56533386	True	NM_018181,NM_052947	chr18,chr18	+,-	ZNF532,ALPK2	-2187,-236008
chr12:45615541-45615957	chr12	+	45615546	45615620	True	NM_001142679,NR_037144,NM_001025356,NM_001142680,NM_001204803	chr12,chr12,chr12,chr12,chr12	+,-,+,+,+	ANO6,PLEKHA8P1,ANO6,ANO6,ANO6	-5827,-5757,-5827,-5721,-5827
chr9:74523230-74525021	chr9	+	74523694	74524974	True	NM_001025780,NM_182505,NM_016014	chr9,chr9,chr9	-,+,-	FAM108B1,C9orf85,FAM108B1	1228,1448,1228
chr19:43773695-43774891	chr19	+	43774181	43774931	True	NR_026881,NM_002784	chr19,chr19	+,-	PRG1,PSG9	78276,-499
chr1:175890091-175890304	chr1	+	175890136	175890218	True	NM_021936,NR_002998	chr1,chr1	+,-	PAPPA2,SCARNA3	542088,47510
chr1:151253217-151253957	chr1	+	151253646	151253955	True	NM_020832,NM_001198773	chr1,chr1	+,-	ZNF687,PI4KB	835,46228
chr3:36963950-36965236	chr3	+	36964326	36965229	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	21369,69611
chr1:179013200-179014410	chr1	+	179013344	179014417	True	NM_014864,NM_001136000	chr1,chr1	+,-	FAM20B,ABL2	-18331,97869
chr19:52598591-52599010	chr19	+	52598639	52598992	True	NM_014225,NM_001136499	chr19,chr19	+,-	PPP2R1A,ZNF841	94062,76
chr2:128403114-128403393	chr2	+	128403161	128403313	True	NM_005291,NR_027823,NM_001161416,NM_001161417,NM_001161415	chr2,chr2,chr2,chr2,chr2	+,-,+,+,+	GPR17,LIMS2,GPR17,GPR17,GPR17	125,2490,125,125,125
chr12:96314760-96316370	chr12	+	96315053	96316409	True	NM_152435,NM_182496	chr12,chr12	+,-	AMDHD1,CCDC38	20661,20069
chr19:6532876-6534494	chr19	+	6532905	6534334	True	NM_003811,NM_006087	chr19,chr19	+,-	TNFSF9,TUBB4	-1946,-30575
chr3:5021583-5021903	chr3	+	5021583	5021899	True	NR_037903,NM_003670	chr3,chr3	-,+	LOC100507582,BHLHE40	-73397,-537
chr16:28958666-28960427	chr16	+	28958673	28960343	True	NM_024816,NM_032815	chr16,chr16	-,+	RABEP2,NFATC2IP	-22141,1974
chr3:33154557-33155368	chr3	+	33154668	33155280	True	NM_001135602,NM_006371	chr3,chr3	-,+	GLB1,CRTAP	-15974,169
chr19:36037870-36038085	chr19	+	36037875	36038097	True	NM_032635,NM_000704	chr19,chr19	+,-	TMEM147,ATP4A	-1382,16513
chr9:33004931-33006718	chr9	+	33005149	33006524	True	NM_001195254,NR_036577,NM_001195252,NM_175073,NM_001195250,NR_036579,NM_001195251,NM_001195248,NM_001195249,NM_175069,NM_001539,NR_036578,NR_036576	chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,-,-,-,-,-,-,-,-,-,+,-,-	APTX,APTX,APTX,APTX,APTX,APTX,APTX,APTX,APTX,APTX,DNAJA1,APTX,APTX	-3539,-3510,-3510,-3510,-3510,-3575,-3510,-3510,-3575,-3510,18684,-3539,-3510
chr8:1992352-1992963	chr8	+	1992433	1992898	True	NR_033895,NM_003970	chr8,chr8	-,+	LOC286083,MYOM2	-741606,259
chr17:79857243-79857562	chr17	+	79857295	79857402	True	NM_016476,NM_005782,NM_001002249,NM_001002248,NM_001002247,NM_001002246,NM_001002245,NM_001002244,NM_148896	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,-,+,+,+,+,+,+,+	ANAPC11,THOC4,ANAPC11,ANAPC11,ANAPC11,ANAPC11,ANAPC11,ANAPC11,NPB	-7747,-7833,-7528,-7747,-7747,-7747,-7747,-7747,2669
chr1:150267240-150267574	chr1	+	150267322	150267394	True	NM_018997,NM_016022,NM_031901	chr1,chr1,chr1	+,-,+	MRPS21,APH1A,MRPS21	-1106,-25790,-1106
chr7:120599858-120600278	chr7	+	120600084	120600252	True	NM_198267,NM_019071,NM_012338	chr7,chr7,chr7	+,+,-	ING3,ING3,TSPAN12	-9325,-9325,-101907
chr10:47654310-47655786	chr10	+	47654669	47655727	True	NR_003601,NR_024495	chr10,chr10	+,-	ANTXRL,LOC642826	2506,-411175
chr20:48436689-48438310	chr20	+	48437483	48438226	True	NM_001135773,NM_015266	chr20,chr20	-,+	SPATA2,SLC9A8	92107,-8284
chr20:26036657-26037355	chr20	+	26036736	26037380	True	NR_003678,NR_026713	chr20,chr20	-,+	C20orf191,FAM182A	57347,-1537
chr20:26036657-26037355	chr20	-	25779796	25780440	False	NR_004846,NR_026714,NR_027061	chr20,chr20,chr20	+,-,-	LOC100134868,FAM182B,FAM182B	209994,1537,-2918
chr4:21854959-21855601	chr4	+	21854978	21855638	True	NR_002813,NM_001128432	chr4,chr4	-,+	NCRNA00099,GBA3	-167,838909
chr1:109793322-109793826	chr1	+	109793345	109793857	True	NM_001408,NM_001005290	chr1,chr1	+,-	CELSR2,PSRC1	-755,31983
chr19:3060166-3061273	chr19	+	3060197	3061227	True	NM_002067,NM_198970,NM_198969,NM_001130	chr19,chr19,chr19,chr19	+,-,-,-	GNA11,AES,AES,AES	33180,1194,1787,1194
chr6:3158988-3159566	chr6	+	3159017	3159367	True	NM_001069,NR_026650	chr6,chr6	-,+	TUBB2A,BPHL	-1234,-40142
chr14:66179321-66181245	chr14	+	66179781	66181123	True	NM_178157,NR_024334	chr14,chr14	+,-	FUT8,LOC645431	-43710,-300446
chr3:185824817-185825285	chr3	+	185824848	185825208	True	NR_033752,NM_004454	chr3,chr3	+,-	LOC344887,ETV5	-138639,1755
chr8:79673126-79674679	chr8	+	79673234	79674650	True	NM_000880,NM_016010	chr8,chr8	-,+	IL7,FAM164A	43158,-95003
chr7:158749405-158749656	chr7	+	158749439	158749695	True	NR_024394,NM_020728	chr7,chr7	+,-	LOC154822,ESYT2	51349,-127120
chr6:5087135-5087732	chr6	+	5087134	5087640	True	NM_001145115,NR_037462	chr6,chr6	+,-	PPP1R3G,MIR3691	-1468,60966
chr7:21985814-21986186	chr7	+	21986007	21986182	True	NM_003777,NM_001127371,NM_001127370,NM_018719	chr7,chr7,chr7,chr7	+,-,-,-	DNAH11,CDCA7L,CDCA7L,CDCA7L	-403225,-465,-465,-465
chr7:77464309-77465156	chr7	+	77464620	77464928	True	NM_001127357,NM_032936,NM_020432,NM_001127359	chr7,chr7,chr7,chr7	+,-,+,+	PHTF2,TMEM60,PHTF2,PHTF2	4518,-36873,4518,4518
chr19:54803139-54803899	chr19	+	54803203	54803810	True	NM_001172654,NM_001013,NM_006865	chr19,chr19,chr19	-,+,-	LILRA3,RPS9,LILRA3	462,-98528,506
chr19:56189984-56190242	chr19	+	56189993	56190217	True	NM_001130072,NM_203374,NM_001130071,NM_013333	chr19,chr19,chr19,chr19	+,-,+,+	EPN1,ZNF784,EPN1,EPN1	-3483,-54052,-2053,-3483
chr15:30297735-30298763	chr15	+	30297746	30298636	True	NR_026859,NM_175610	chr15,chr15	+,-	FAM7A3,TJP1	97298,-183040
chr9:123689150-123690236	chr9	+	123689158	123690120	True	NM_005658,NR_024408,NM_001190945	chr9,chr9,chr9	-,+,-	TRAF1,LOC253039,TRAF1	15,-83889,1381
chr19:57111858-57112396	chr19	+	57112124	57112302	True	NM_021216,NM_001005850	chr19,chr19	+,-	ZNF71,ZNF835	-5512,71994
chr16:69138490-69139107	chr16	+	69138637	69138865	True	NM_138612,NM_005329,NM_001199280,NM_001040146	chr16,chr16,chr16,chr16	+,+,+,-	HAS3,HAS3,HAS3,CHTF8	1263,2577,601,27259
chr9:33063282-33064831	chr9	+	33063401	33064641	True	NM_001539,NM_018225	chr9,chr9	+,-	DNAJA1,SMU1	-38256,12124
chr9:139095816-139096448	chr9	+	139095965	139096383	True	NM_015597,NM_014564,NM_178138	chr9,chr9,chr9	+,-,-	GPSM1,LHX3,LHX3	125548,-961,622
chr9:34048706-34049404	chr9	+	34048730	34049450	True	NM_018449,NR_003690	chr9,chr9	-,+	UBAP2,SNORD121B	-141,-114495
chr12:187510-188093	chr12	+	187590	187930	True	NM_015232,NR_026823	chr12,chr12	+,-	IQSEC3,FAM138D	-1099,-38178
chr12:187510-188093	chr20	-	62947330	62947668	False	NM_001104925,NM_005286	chr20,chr20	+,-	PCMTD2,NPBWR2	-60333,-209146
chr10:114061020-114061976	chr10	+	114061221	114061977	True	NR_028134,NM_058222	chr10,chr10	-,+	GUCY2GP,TECTB	54428,-17786
chr3:189408441-189408982	chr3	+	189408477	189408856	True	NM_003722,NM_018192	chr3,chr3	+,-	TP63,LEPREL1	-59322,430103
chr4:111558572-111558839	chr4	+	111558655	111558833	True	NM_153426,NM_153427,NM_001977,NM_001204399,NM_001204398,NM_001204397	chr4,chr4,chr4,chr4,chr4,chr4	-,-,+,-,-,-	PITX2,PITX2,ENPEP,PITX2,PITX2,PITX2	4496,4496,-161477,4496,4496,4496
chr16:66966706-66967185	chr16	+	66966707	66967233	True	NM_003869,NM_016062,NM_198061,NM_001128850,NM_004165,NR_024525,NR_036684	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,-,+,-,-,-,+	CES2,FAM96B,CES2,RRAD,RRAD,FAM96B,CES2	1113,1137,1113,-7268,-7268,1137,1140
chr19:6432228-6433469	chr19	+	6432268	6433494	True	NM_139161,NM_003685,NM_173637	chr19,chr19,chr19	+,-,-	CRB3,KHSRP,SLC25A41	30765,-7446,346
chr7:156932382-156932669	chr7	+	156932521	156932724	True	NM_005515,NM_014671	chr7,chr7	-,+	MNX1,UBE3C	-129174,-917
chr5:141998658-141999252	chr5	+	141998810	141999037	True	NM_001144892,NM_001135608,NM_033137	chr5,chr5,chr5	-,+,-	FGF1,ARHGAP26,FGF1	1921,151254,-5084
chr17:37121106-37121847	chr17	+	37121419	37121779	True	NR_033753,NM_001008777	chr17,chr17	+,-	FLJ43826,FBXO47	64379,1926
chr20:55206769-55207109	chr20	+	55206872	55207134	True	NM_080615,NM_003222	chr20,chr20	-,+	GCNT7,TFAP2C	-105891,-2565
chr3:129249421-129249874	chr3	+	129249446	129249856	True	NM_000539,NM_015103	chr3,chr3	+,-	RHO,PLXND1	-2015,75776
chr10:51561272-51562620	chr10	+	51561349	51562500	True	NM_005437,NM_006327,NM_001145263,NM_001145261,NM_001145260	chr10,chr10,chr10,chr10,chr10	+,-,+,+,+	NCOA4,TIMM23,NCOA4,NCOA4,NCOA4	9863,60899,2607,2607,2607
chr15:65281879-65282090	chr15	+	65281885	65282085	True	NM_001127890,NM_178859,NM_001127889,NM_016630	chr15,chr15,chr15,chr15	-,+,-,-	SPG21,OSTBETA,SPG21,SPG21	216,55622,-73,216
chrX:65718822-65719104	chrX	+	65718822	65719150	True	NM_001199689,NM_014799	chrX,chrX	-,+	EDA2R,HEPH	139792,-334764
chr22:39758409-39760290	chr22	+	39758506	39760251	True	NM_001033853,NM_145738	chr22,chr22	-,+	RPL3,SYNGR1	-42836,-77
chr15:63414509-63414849	chr15	+	63414768	63414898	True	NM_032857,NM_015920,NM_171846	chr15,chr15,chr15	+,-,+	LACTB,RPS27L,LACTB	-820,34893,-820
chr9:79056152-79057070	chr9	+	79056375	79057066	True	NM_001097634,NM_018339	chr9,chr9	+,-	GCNT1,RFK	-23,-46931
chr5:59173567-59174884	chr5	+	59173835	59174710	True	NR_024617,NM_001104631	chr5,chr5	+,-	PART1,PDE4D	608829,14967
chr22:25597962-25598752	chr22	+	25597985	25598684	True	NM_004076,NM_182492	chr22,chr22	+,-	CRYBB3,LRP5L	-2211,159890
chr18:60984953-60985180	chr18	+	60985032	60985162	True	NM_002639,NM_000657,NM_000633	chr18,chr18,chr18	+,-,-	SERPINB5,BCL2,BCL2	158981,1501,1501
chr16:729352-729686	chr16	+	729501	729623	True	NM_001005920,NM_003961,NM_005861	chr16,chr16,chr16	-,+,+	JMJD8,RHBDL1,STUB1	4866,-3477,491
chr5:16615922-16616181	chr5	+	16615922	16616166	True	NM_001034850,NM_006317	chr5,chr5	-,+	FAM134B,BASP1	1004,601583
chr10:8902370-8904247	chr10	+	8902463	8904224	True	NM_002051,NR_024256	chr10,chr10	+,-	GATA3,FLJ45983	-805854,-807016
chr5:37075460-37075867	chr5	+	37075671	37075911	True	NM_133433,NM_023073	chr5,chr5	+,-	NIPBL,C5orf42	-198861,173669
chr12:6932201-6933687	chr12	+	6932259	6933615	True	NM_014262,NM_031299,NM_019858,NM_014449	chr12,chr12,chr12,chr12	+,-,+,+	LEPREL2,CDCA3,GPR162,GPR162	3956,26891,-1347,-1347
chr12:4629753-4630537	chr12	+	4629754	4630218	True	NM_001130862,NM_020374	chr12,chr12	+,-	RAD51AP1,C12orf4	17731,17479
chr20:30064019-30064289	chr20	+	30064018	30064196	True	NM_001037500,NR_024358,NM_014012	chr20,chr20,chr20	-,+,+	DEFB124,NCRNA00028,REM1	-3202,9384,-964
chr2:33105225-33105859	chr2	+	33105516	33105765	True	NR_027100,NM_021209,NR_027099	chr2,chr2,chr2	+,-,+	LOC285045,NLRC4,LOC285045	2102,-614704,2000
chr12:12712870-12714720	chr12	+	12712894	12714471	True	NM_001310,NM_030640	chr12,chr12	+,-	CREBL2,DUSP16	50359,1028
chr1:170513947-170515251	chr1	+	170513946	170515077	True	NR_027397,NR_026957	chr1,chr1	+,-	GORAB,LOC284688	-12734,-260597
chr16:66954944-66955672	chr16	+	66954987	66955661	True	NM_003869,NM_001204746,NM_001204744,NM_001204745,NM_001128850,NM_004165,NM_004062	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,-,-,-,-	CES2,CDH16,CDH16,CDH16,RRAD,RRAD,CDH16	12685,-2100,-2100,-2100,3828,3828,-2100
chrX:153144123-153144636	chrX	+	153144171	153144557	True	NM_000425,NM_001143963,NM_024003,NR_027419	chrX,chrX,chrX,chrX	-,-,-,+	L1CAM,L1CAM,L1CAM,AVPR2	-2772,-2772,-2772,23427
chr1:206288746-206290129	chr1	+	206288968	206290166	True	NM_001910,NM_001007544	chr1,chr1	+,-	CTSE,C1orf186	27292,-321
chr12:52697770-52698566	chr12	+	52697904	52698546	True	NM_002284,NM_002281	chr12,chr12	+,-	KRT86,KRT81	-2306,-12605
chr12:52697770-52698566	chr12	-	52682655	52683049	False	NM_002284,NM_002281	chr12,chr12	+,-	KRT86,KRT81	12599,2300
chr19:47419282-47420671	chr19	+	47419494	47420100	True	NM_021575,NM_004491	chr19,chr19	-,+	AP2S1,GRLF1	-65291,1832
chr3:40518975-40520786	chr3	+	40519204	40520833	True	NM_001145083,NM_001145082,NR_033965,NM_001145093,NR_026746	chr3,chr3,chr3,chr3,chr3	+,+,-,+,+	ZNF619,ZNF619,FLJ33065,ZNF619,ZNF619	-622,-651,-168015,-651,-651
chr17:27042436-27043934	chr17	+	27042441	27043899	True	NR_024575,NR_000014,NR_024579,NM_000984,NM_001144942,NM_152465,NM_001144943,NR_000013,NR_000009,NR_000010,NM_138463,NM_031934,NM_001142624,NM_001142625	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,-,+,-,-,-,+,+,+,-,-,-,-	RAB34,SNORD42A,RAB34,RPL23A,RAB34,PROCA1,RAB34,SNORD42B,SNORD4B,SNORD4A,TLCD1,RAB34,RAB34,RAB34	1402,6547,1402,3100,1059,-3569,1437,3668,6799,5700,9381,1059,1437,1437
chr2:176032112-176032525	chr2	+	176032137	176032573	True	NM_024583,NM_001880,NR_030630	chr2,chr2,chr2	+,-,-	SCRN3,ATF2,MIR933	-771731,374,26
chr1:217262092-217262914	chr1	+	217262246	217262946	True	NM_138796,NM_206595,NM_206594	chr1,chr1,chr1	+,-,-	SPATA17,ESRRG,ESRRG	541748,82,82
chr1:24742411-24743267	chr1	+	24742613	24743259	True	NM_020448,NM_001199013,NM_001199012,NM_001199014,NM_178122	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	NIPAL3,C1orf201,C1orf201,C1orf201,C1orf201	-419,-2351,-1026,-2351,-2351
chr7:143110541-143110982	chr7	+	143110696	143111001	True	NR_033897,NM_005232	chr7,chr7	+,-	LOC285965,EPHA1	-5841,-4711
chrX:48384525-48385013	chrX	+	48384524	48385056	True	NM_006579,NM_033518	chrX,chrX	+,-	EBP,SLC38A5	-4422,-55880
chr19:3095599-3095820	chr19	+	3095611	3095811	True	NM_002067,NM_198969	chr19,chr19	+,-	GNA11,AES	-1254,-32647
chr9:104291730-104292179	chr9	+	104291774	104292143	True	NM_019592,NM_032342	chr9,chr9	+,-	RNF20,C9orf125	3989,-42299
chr14:39701634-39703300	chr14	+	39702450	39703345	True	NM_177452,NM_054024	chr14,chr14	-,+	TRAPPC6B,MIA2	-62816,87
chrX:14546947-14547233	chrX	+	14546968	14547280	True	NM_002063,NM_001171942,NM_001118885,NM_001018113,NM_001118886	chrX,chrX,chrX,chrX,chrX	+,+,+,-,+	GLRA2,GLRA2,GLRA2,FANCB,GLRA2	139,139,139,343954,139
chr14:35208486-35209983	chr14	+	35209534	35209832	True	NR_002937,NR_028131	chr14,chr14	+,-	C14orf19,CFL2	199295,-25505
chr9:138437866-138438282	chr9	+	138437937	138438145	True	NM_014582,NM_144654	chr9,chr9	+,-	OBP2A,C9orf116	-3,-46176
chr9:138437866-138438282	chr9	-	136084551	136084675	False	NM_014581,NR_001275	chr9,chr9	-,+	OBP2B,CELP	3,-126676
chr5:35230566-35231639	chr5	+	35230573	35231437	True	NM_194283,NM_000949	chr5,chr5	+,-	DNAJC21,PRLR	-300926,38
chr10:121417087-121417867	chr10	+	121417091	121417609	True	NM_004281,NM_003252	chr10,chr10	+,-	BAG3,TIAL1	-6260,-60550
chr19:12885869-12886165	chr19	+	12885886	12886194	True	NM_002229,NM_013312,NM_001100176	chr19,chr19,chr19	+,-,-	JUNB,HOOK2,HOOK2	16115,290,290
chr12:9600832-9601091	chr12	+	9600974	9601140	True	NR_033399,NR_024374	chr12,chr12	-,+	DDX12,LOC642846	-206,-164772
chr12:9600832-9601091	chr12	-	31226560	31226639	False	NM_004399,NM_001135811,NM_030653,NM_152438	chr12,chr12,chr12,chr12	+,-,+,+	DDX11,FAM60A,DDX11,DDX11	139,252561,139,139
chr6:167794868-167796297	chr6	+	167794927	167796028	True	NM_004610,NM_031949	chr6,chr6	-,+	TCP10,TTLL2	2030,-56404
chr6:167794868-167796297	chr6	-	167587087	167587137	False	NM_005299,NM_001145121	chr6,chr6	-,+	GPR31,TCP10L2	-15768,-3057
chr4:11427698-11428931	chr4	+	11427728	11428842	True	NR_030298,NM_005114	chr4,chr4	+,-	MIR572,HS3ST1	-57328,1745
chr1:24017830-24018061	chr1	+	24017960	24018106	True	NM_001199802,NM_001127621,NM_000975	chr1,chr1,chr1	+,-,+	RPL11,GALE,RPL11	162,108004,162
chr1:186643539-186644080	chr1	+	186643548	186643876	True	NM_024420,NM_000963	chr1,chr1	+,-	PLA2G4A,PTGS2	154155,5733
chr5:177543208-177543692	chr5	+	177543215	177543717	True	NM_015111,NM_001034833	chr5,chr5	+,-	N4BP3,NHP2	-2710,37294
chrX:48687610-48688189	chrX	+	48687680	48688204	True	NM_181532,NM_013271	chrX,chrX	+,-	ERAS,PCSK1N	-448,5806
chr2:113029109-113029434	chr2	+	113029266	113029392	True	NM_198581,NM_032494	chr2,chr2	+,-	ZC3H6,ZC3H8	3785,-16602
chr4:48004821-48006337	chr4	+	48004895	48006171	True	NM_000087,NM_207330	chr4,chr4	-,+	CNGA1,NIPAL1	8850,12619
chr8:98788650-98788989	chr8	+	98788656	98788982	True	NR_002581,NM_018407	chr8,chr8	-,+	SNORA72,LAPTM4B	265513,-898
chr19:1175703-1176595	chr19	+	1175703	1176638	True	NM_000455,NM_014963	chr19,chr19	+,-	STK11,SBNO2	29159,-1421
chr19:50920363-50920740	chr19	+	50920430	50920788	True	NM_003121,NM_004851	chr19,chr19	+,-	SPIB,NAPSA	1406,-51499
chrX:47986811-47987192	chrX	+	47986826	47987038	True	NM_205856,NR_033730,NM_001079900	chrX,chrX,chrX	+,-,+	SPACA5,ZNF630,SPACA5B	-281,-55801,3000
chrX:47986811-47987192	chrX	+	47863957	47864169	False	NM_001007088,NM_205856,NM_006962,NM_001178099,NM_001079900	chrX,chrX,chrX,chrX,chrX	-,+,-,-,+	ZNF182,SPACA5,ZNF182,ZNF182,SPACA5B	-580,-281,-580,-563,3000
chr3:36929474-36930815	chr3	+	36929790	36930790	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	55808,104050
chr2:241080367-241081860	chr2	+	241080392	241081701	True	NM_001163424,NM_148961,NM_138336,NM_002081	chr2,chr2,chr2,chr2	-,-,-,+	MYEOV2,OTOS,MYEOV2,GPC1	-4645,-319,-4628,293413
chr3:125683992-125684767	chr3	+	125683996	125684724	True	NM_001012337,NM_001195223	chr3,chr3	+,-	ROPN1B,ALG1L	3303,-28109
chr13:43566900-43568717	chr13	+	43566919	43568715	True	NM_001002264,NM_013238,NM_033255	chr13,chr13,chr13	-,+,-	EPSTI1,DNAJC15,EPSTI1	-542,28646,-542
chr6:17987161-17987495	chr6	+	17987165	17987381	True	NM_001105568,NM_153042,NM_022113,NM_001105566,NM_001105567	chr6,chr6,chr6,chr6,chr6	-,+,-,-,-	KIF13A,KDM1B,KIF13A,KIF13A,KIF13A	468,168237,468,468,468
chr1:24829875-24830824	chr1	+	24829901	24830520	True	NM_001199012,NM_013441	chr1,chr1	-,+	C1orf201,RCAN3	-88314,-567
chr4:75309571-75310616	chr4	+	75309900	75310632	True	NM_001657,NM_002089	chr4,chr4	+,-	AREG,CXCL2	220,-344903
chr4:75309571-75310616	chr4	+	75479674	75480408	False	NM_001657,NM_001729	chr4,chr4	+,-	AREG,BTC	220,239524
chr11:75238820-75239816	chr11	+	75238968	75239796	True	NM_030792,NM_001235	chr11,chr11	-,+	GDPD5,SERPINH1	-2369,33373
chr14:50064660-50064999	chr14	+	50064716	50064930	True	NM_203467,NR_037792,NR_037793,NM_001030001,NM_152329	chr14,chr14,chr14,chr14,chr14	+,+,+,-,+	LRR1,LRR1,LRR1,RPS29,LRR1	484,484,484,-11622,484
chr3:119812012-119812232	chr3	+	119812026	119812229	True	NM_002093,NM_001146156,NM_022002	chr3,chr3,chr3	-,-,+	GSK3B,GSK3B,NR1I2	1085,1085,-310521
chr10:94446554-94447225	chr10	+	94446711	94447048	True	NM_002729,NM_004969	chr10,chr10	+,-	HHEX,IDE	2632,-112859
chr6:133135134-133135532	chr6	+	133135174	133135530	True	NM_052831,NR_002436,NR_002435,NM_001016,NR_002434	chr6,chr6,chr6,chr6,chr6	-,+,+,+,+	C6orf192,SNORA33,SNORD100,RPS12,SNORD101	-15427,2827,2410,177,915
chr6:143769926-143771436	chr6	+	143770582	143771484	True	NM_182503,NM_003630	chr6,chr6	-,+	ADAT2,PEX3	407,433
chr20:62178303-62178517	chr20	+	62178348	62178484	True	NM_005975,NM_024059,NM_080823	chr20,chr20,chr20	-,+,-	PTK6,C20orf195,SRMS	-9641,5888,423
chr13:20112042-20112451	chr13	+	20112041	20112329	True	NM_017520,NM_199254,NM_001141968,NM_130785	chr13,chr13,chr13,chr13	+,-,-,-	MPHOSPH8,TPTE2,TPTE2,TPTE2	95458,-1138,-1138,-1138
chr13:20112042-20112451	chrY	-	28619622	28619860	False	NR_002179,NR_002176	chrY,chrY	-,+	TTTY17C,TTTY3B	-1288702,-745048
chr22:46663030-46663510	chr22	+	46663192	46663440	True	NM_006071,NM_017931	chr22,chr22	-,+	PKDREJ,TTC38	-3973,420
chr17:37123636-37124192	chr17	+	37123744	37124099	True	NR_033753,NM_001008777	chr17,chr17	+,-	FLJ43826,FBXO47	62059,-89
chr2:102625220-102626039	chr2	+	102625537	102626014	True	NM_173343,NM_001145664	chr2,chr2	+,-	IL1R2,RFX8	-10129,-534372
chr2:112252751-112253378	chr2	+	112252949	112253355	True	NR_024373,NM_207003,NR_015395	chr2,chr2,chr2	-,+,-	LOC541471,BCL2L11,LOC541471	-257,-374522,-257
chr2:112252751-112253378	chr2	-	87754399	87754675	False	NM_001078170,NR_024206,NR_024204,NR_024205	chr2,chr2,chr2,chr2	-,+,+,+	RGPD2,NCRNA00152,NCRNA00152,NCRNA00152	370674,298,298,298
chr7:27239541-27239774	chr7	+	27239592	27239720	True	NM_000522,NR_037843	chr7,chr7	-,+	HOXA13,NCRNA00213	55,335
chr1:241995662-241996049	chr1	+	241995755	241996067	True	NM_001004343,NM_130398	chr1,chr1	-,+	MAP1LC3C,EXO1	166368,15425
chr12:1802858-1803100	chr12	+	1803024	1803145	True	NM_024551,NR_037422	chr12,chr12	+,-	ADIPOR2,MIR3649	-2836,-33478
chr15:74830901-74831319	chr15	+	74831090	74831176	True	NM_006465,NM_201265	chr15,chr15	+,-	ARID3B,UBL7	2371,-77561
chr11:102189044-102189865	chr11	+	102189156	102189725	True	NM_001165,NM_052932,NM_182962	chr11,chr11,chr11	+,-,+	BIRC3,TMEM123,BIRC3	-1013,134101,-1013
chr10:33623320-33623531	chr10	+	33623401	33623543	True	NM_001024629,NM_001024628,NM_024688,NM_003873	chr10,chr10,chr10,chr10	-,-,+,-	NRP1,NRP1,C10orf68,NRP1	340,340,-766801,340
chr7:54487731-54488583	chr7	+	54487796	54488388	True	NM_182546,NR_004422	chr7,chr7	+,-	VSTM2A,HPVC1	121630,-217682
chr2:191174814-191176262	chr2	+	191175295	191176277	True	NM_001128928,NM_014362,NM_198047	chr2,chr2,chr2	+,-,-	INPP1,HIBCH,HIBCH	31918,8544,8544
chr15:52970482-52970757	chr15	+	52970515	52970679	True	NM_002748,NM_019600	chr15,chr15	+,-	MAPK6,KIAA1370	-659155,191
chr3:161219813-161220144	chr3	+	161219943	161220191	True	NM_001080440,NM_001040100	chr3,chr3	+,-	OTOL1,C3orf57	-5399,-130072
chr19:18941201-18942569	chr19	+	18941200	18942538	True	NM_000095,NM_002911	chr19,chr19	-,+	COMP,UPF1	-39086,205
chr12:11802932-11803142	chr12	+	11802951	11803110	True	NM_001987,NM_006248	chr12,chr12	+,-	ETV6,PRB2	-214,-254453
chr12:124088979-124089607	chr12	+	124089024	124089550	True	NM_001414,NM_020936	chr12,chr12	-,+	EIF2B1,DDX55	28823,-2403
chr1:100798675-100799390	chr1	+	100798816	100799397	True	NM_033313,NM_001918	chr1,chr1	+,-	CDC14A,DBT	18625,-83407
chr22:43046866-43047270	chr22	+	43046960	43047086	True	NM_001171660,NM_001171661,NM_001129819,NM_007326,NR_029422,NM_000398	chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,+,-	CYB5R3,CYB5R3,CYB5R3,CYB5R3,RNU12,CYB5R3	-6320,-3965,-3965,-3965,-35760,-1555
chr6:34350102-34350624	chr6	+	34350264	34350592	True	NM_006703,NM_020804	chr6,chr6	-,+	NUDT3,PACSIN1	9915,83260
chr3:49710513-49710992	chr3	+	49710599	49711013	True	NM_001640,NM_020998	chr3,chr3	+,-	APEH,MST1	421,15233
chr10:2010277-2011457	chr10	+	2010370	2011487	True	NR_033387,NM_018702	chr10,chr10	+,-	NCRNA00168,ADARB2	-441603,-230652
chr1:220374932-220375235	chr1	+	220375128	220375214	True	NM_018060,NR_002994,NR_031705	chr1,chr1,chr1	+,-,-	IARS2,SNORA36B,MIR664	-107741,-1110,-1167
chr2:122495578-122495937	chr2	+	122495577	122495781	True	NM_032390,NM_004622	chr2,chr2	-,+	MKI67IP,TSN	-1074,17339
chr16:88931898-88932239	chr16	+	88931956	88932182	True	NM_001080487,NM_000512,NM_016209	chr16,chr16,chr16	-,-,+	PABPN1L,GALNS,TRAPPC2L	936,-8582,-8501
chr5:140777772-140778267	chr5	+	140777868	140778296	True	NM_018925,NM_032100,NM_018921,NM_032099,NM_032088,NM_032089,NM_018926,NM_005642,NM_014004	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,+,-,+	PCDHGB5,PCDHGB6,PCDHGA9,PCDHGB5,PCDHGA8,PCDHGA9,PCDHGB6,TAF7,PCDHGA8	-224,9473,4223,-224,-6436,4223,9473,-77517,-6436
chr5:140777772-140778267	chr5	+	140767625	140767851	False	NM_018925,NM_018920,NM_003736,NM_032099,NM_032098,NM_032088,NM_005642,NM_014004,NM_032087	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,-,+,+	PCDHGB5,PCDHGA7,PCDHGB4,PCDHGB5,PCDHGB4,PCDHGA8,TAF7,PCDHGA8,PCDHGA7	9843,-5209,-224,9843,-224,3631,-67274,3631,-5209
chr20:42541541-42543019	chr20	+	42541865	42542914	True	NM_176791,NM_032883,NM_001098796,NM_001098797	chr20,chr20,chr20,chr20	-,+,+,+	GTSF1L,TOX2,TOX2,TOX2	-186223,1867,1867,577
chrX:117863987-117864597	chrX	+	117864266	117864616	True	NM_001560,NM_020721	chrX,chrX	+,-	IL13RA1,KIAA1210	-2759,419976
chr2:234775861-234776212	chr2	+	234775913	234776119	True	NM_024080,NR_024322	chr2,chr2	+,-	TRPM8,MSL3P1	49923,996
chr9:99797270-99798443	chr9	+	99797399	99798336	True	NM_001333,NM_001045477,NM_001201575	chr9,chr9,chr9	-,+,-	CTSL2,FAM22G,CTSL2	3318,-106172,3651
chr22:41600966-41601231	chr22	+	41600971	41601169	True	NM_138481,NM_031488	chr22,chr22	-,+	CHADL,L3MBTL2	35816,143
chr1:203762463-203762964	chr1	+	203762561	203763003	True	NM_001174108,NM_014827,NR_027902	chr1,chr1,chr1	+,+,-	ZBED6,ZC3H11A,C1orf157	3647,1747,247439
chr12:57609216-57609683	chr12	+	57609222	57609640	True	NM_020142,NM_007224	chr12,chr12	-,+	NDUFA4L2,NXPH4	24885,937
chr22:36782771-36783083	chr22	+	36782909	36782999	True	NM_145343,NM_002473	chr22,chr22	+,-	APOL1,MYH9	-133843,1114
chr7:100132909-100134168	chr7	+	100133561	100134167	True	NM_006076,NM_001168682	chr7,chr7	+,-	AGFG2,SAP25	2666,37154
chr12:53605274-53606884	chr12	+	53605574	53606790	True	NM_001004304,NM_000889,NM_001042728	chr12,chr12,chr12	+,-,-	ZNF740,ITGB7,RARG	-31090,-4574,7410
chr5:43545962-43546951	chr5	+	43546166	43546833	True	NM_006451,NM_012343	chr5,chr5	-,+	PAIP1,NNT	10421,55957
chr1:231762650-231762868	chr1	+	231762808	231762884	True	NM_001164537,NM_018662,NM_001164538,NM_001164539,NM_001012957,NM_001012958,NM_001012959,NR_034037,NM_001164549,NM_001164548,NM_001164542,NM_001164541,NM_001164540,NM_001164547,NM_001164546,NM_001164545,NM_001164544,NM_001164550,NM_001164551,NM_001164552,NM_001164553,NM_001164554,NM_001164555,NM_001164556	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,+,+,-,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+	DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,LOC100287814,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1,DISC1	-298,-298,-298,-298,-298,-298,-298,-14972,-298,-298,-298,-298,-298,-298,-298,-298,-298,-298,-298,-298,-298,-298,-298,-298
chr5:142782748-142782995	chr5	+	142782792	142782991	True	NM_001024094,NM_001204261,NM_001204260,NM_001204263,NM_001204262,NM_001204265,NM_001204264,NM_001018076,NM_021182,NM_001204258,NM_001204259,NM_000176,NM_001020825	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,-,-,-,-,+,-,-,-,-	NR3C1,NR3C1,NR3C1,NR3C1,NR3C1,NR3C1,NR3C1,NR3C1,HMHB1,NR3C1,NR3C1,NR3C1,NR3C1	313,313,313,313,313,313,313,1104,408734,313,313,313,313
chr8:80681227-80681427	chr8	+	80681273	80681474	True	NM_001040708,NM_007029,NM_012258	chr8,chr8,chr8	-,+,-	HEY1,STMN2,HEY1	-1175,-158275,-1175
chrX:120122918-120124315	chrX	+	120123268	120124332	True	NM_012084,NM_001080139,NM_001080138,NM_001080137,NM_173571,NM_001080146,NM_001080144,NM_001080145,NM_001080142,NM_001080143,NM_001080141	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,-,-,-,-,-,-,-,-,-,-	GLUD2,CT47A8,CT47A9,CT47A10,CT47A11,CT47A1,CT47A3,CT47A2,CT47A5,CT47A4,CT47A6	57129,-8490,-8490,-8490,-8490,-3630,-8490,-8490,-8490,-8490,-3630
chr21:46078727-46078936	chr21	+	46078784	46078936	True	NM_181684,NM_198697,NM_198698	chr21,chr21,chr21	-,+,-	KRTAP12-2,KRTAP12-3,KRTAP12-4	7958,-986,-4208
chr4:174291841-174292047	chr4	+	174291867	174291985	True	NM_007281,NM_003864	chr4,chr4	-,+	SCRG1,SAP30	28682,107
chr8:109796952-109797357	chr8	+	109796951	109797399	True	NM_153015,NM_003301	chr8,chr8	-,+	TMEM74,TRHR	2421,302276
chr19:28282578-28282909	chr19	+	28282892	28282952	True	NR_027318,NR_027301	chr19,chr19	+,-	LOC148145,LOC148189	1173085,1946
chr20:38482240-38483502	chr20	+	38482245	38483300	True	NR_033905,NR_027124	chr20,chr20	+,-	DHX35,LOC339568	-891316,-628854
chr17:4400482-4400882	chr17	+	4400496	4400856	True	NM_001124758,NM_001105538	chr17,chr17	+,-	SPNS2,MYBBP1A	1272,57875
chr15:72612419-72612627	chr15	+	72612528	72612620	True	NM_052840,NR_027262,NM_001172684	chr15,chr15,chr15	-,+,-	CELF6,C15orf34,CELF6	-3,55833,-241
chr16:67599063-67600335	chr16	+	67599190	67600137	True	NM_001191022,NM_001138,NM_006565	chr16,chr16,chr16	+,-,+	CTCF,AGRP,CTCF	-2938,-81474,-2938
chr6:42421458-42421670	chr6	+	42421469	42421718	True	NM_001184801,NM_033502	chr6,chr6	+,-	UBR2,TRERF1	110041,-1686
chr1:20515952-20516500	chr1	+	20515991	20516553	True	NM_001105572,NM_152376	chr1,chr1	-,+	PLA2G2C,UBXN10	-14304,-3464
chr12:100865032-100865789	chr12	+	100865156	100865756	True	NM_152317,NM_005123	chr12,chr12	-,+	DEPDC4,NR1H4	-204299,1922
chr4:149362932-149363211	chr4	+	149363000	149363232	True	NM_001166104,NM_000901,NM_024605	chr4,chr4,chr4	-,-,+	NR3C2,NR3C2,ARHGAP10	490,490,-709601
chr14:65570752-65571255	chr14	+	65570982	65571244	True	NM_002028,NM_197957,NM_145113,NM_145112,NM_145114,NM_145116,NM_002382	chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,-,-,-,-,-,-	FNTB,MAX,MAX,MAX,MAX,MAX,MAX	-117535,-1755,-1755,-1755,-1755,-1755,-1755
chr12:2161317-2161656	chr12	+	2161333	2161623	True	NM_001129834,NM_001129835,NM_001129836,NM_001129837,NM_001129830,NM_001129831,NM_001129832,NM_001129833,NM_001129838,NM_001129839,NM_199460,NM_001129841,NM_001129840,NM_001129843,NM_001129842,NM_001129844,NM_001129846,NM_001129827,NM_152640,NM_001129829,NM_000719,NM_001167623,NM_001167625,NM_001167624	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,-,+,+,+,+,+	CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C,DCP1B,CACNA1C,CACNA1C,CACNA1C,CACNA1C,CACNA1C	792,792,792,792,792,792,792,792,792,792,792,792,792,792,792,792,792,792,-47656,792,792,792,792,792
chr2:191184690-191185326	chr2	+	191184775	191185303	True	NM_001128928,NM_014362,NM_198047	chr2,chr2,chr2	+,-,-	INPP1,HIBCH,HIBCH	22892,-4,-4
chr1:166811831-166813181	chr1	+	166812334	166813090	True	NM_017542,NM_053053	chr1,chr1	+,-	POGK,TADA1	-3661,32614
chr19:52801316-52801605	chr19	+	52801413	52801507	True	NM_001102657,NM_144684	chr19,chr19	-,+	ZNF836,ZNF480	-126517,-1038
chr12:132315417-132315645	chr12	+	132315467	132315679	True	NM_175066,NM_016155	chr12,chr12	-,+	DDX51,MMP17	313251,-2577
chr12:111358295-111358637	chr12	+	111358320	111358604	True	NM_000432,NR_036513	chr12,chr12	-,+	MYL2,LOC100131138	-34,15801
chr10:135044724-135044949	chr10	+	135044772	135044898	True	NR_030170,NM_014468,NM_003577	chr10,chr10,chr10	-,+,+	MIR202,VENTX,UTF1	16276,6509,-1045
chr16:75590273-75590749	chr16	+	75590276	75590718	True	NM_001077418,NM_001077419,NM_001077416,NM_007285	chr16,chr16,chr16,chr16	-,-,-,+	TMEM231,TMEM231,TMEM231,GABARAPL2	-106,-106,-140,9530
chr10:76869867-76870322	chr10	+	76869880	76870332	True	NM_144660,NM_001174156,NM_001007271,NM_001007273,NM_001007272	chr10,chr10,chr10,chr10,chr10	+,+,-,-,-	SAMD8,SAMD8,DUSP13,DUSP13,DUSP13	1060,1060,-910,-910,-910
chr16:21275666-21276263	chr16	+	21275725	21276133	True	NM_001014444,NM_145865	chr16,chr16	-,+	CRYM,ANKS4B	38321,-30760
chr6:88301742-88302269	chr6	+	88301812	88302068	True	NM_020320,NM_181837,NM_012381,NM_001197259	chr6,chr6,chr6,chr6	-,+,+,+	RARS2,ORC3,ORC3,ORC3	-2077,-2085,-2085,-2085
chr10:76584405-76585103	chr10	+	76584548	76584944	True	NM_001003892,NM_012330	chr10,chr10	-,+	DUPD1,MYST4	233378,1434
chr20:43597071-43598703	chr20	+	43597429	43598695	True	NM_006809,NM_006282	chr20,chr20	-,+	TOMM34,STK4	-8315,-2361
chr15:93630454-93631497	chr15	+	93630476	93631457	True	NM_001166287,NM_020211,NR_036136	chr15,chr15,chr15	-,-,+	RGMA,RGMA,MIR3175	346,1037,-182898
chr1:26374720-26375777	chr1	+	26374853	26375807	True	NM_001004434,NM_032513,NM_004455	chr1,chr1,chr1	-,-,+	SLC30A2,SLC30A2,EXTL1	-2249,-2249,-26633
chr18:25758435-25758741	chr18	+	25758479	25758665	True	NR_026908,NM_001792	chr18,chr18	+,-	C18orf16,CDH2	-1313258,-1034
chr5:140201151-140201371	chr5	+	140201167	140201391	True	NM_031849,NM_002109,NM_018909,NM_018908,NM_031848,NM_031501	chr5,chr5,chr5,chr5,chr5,chr5	+,-,+,+,+,+	PCDHA6,HARS,PCDHA6,PCDHA5,PCDHA6,PCDHA5	6258,-130196,6258,-22,6258,-22
chr16:11035632-11035847	chr16	+	11035646	11035784	True	NM_014015,NM_015226	chr16,chr16	-,+	DEXI,CLEC16A	523,2560
chr16:11035632-11035847	chr15	+	23157999	23158079	False	NR_024074,NR_003521	chr15,chr15	+,-	GOLGA8IP,WHAMML1	97162,50328
chr16:11035632-11035847	chr15	-	29034422	29034502	False	NR_036475,NR_033351,NR_037599	chr15,chr15,chr15	+,-,+	LOC100289656,GOLGA8F,LOC646278	-1084,-256279,477
chr6:13612865-13614836	chr6	+	13613190	13614854	True	NM_016167,NM_005493	chr6,chr6	+,-	NOL7,RANBP9	704,96992
chr11:101824607-101824849	chr11	+	101824635	101824703	True	NM_020802,NM_178127	chr11,chr11	+,-	KIAA1377,ANGPTL5	-38947,-37382
chr10:135440511-135442393	chr10	+	135440522	135442199	True	NM_001127386	chr10	+	DUX4L2	38168
chr10:135440511-135442393	chr4	+	190948635	190950312	False	NM_012147,NM_001005217	chr4,chr4	+,-	DUX2,FRG2	38554,-223
chr20:34354246-34355546	chr20	+	34355027	34355315	True	NM_184234,NM_016436	chr20,chr20	-,+	RBM39,PHF20	-24834,4607
chr2:38592516-38594025	chr2	+	38593115	38594035	True	NM_001135673,NR_027252	chr2,chr2	-,+	ATL2,C2orf58	10447,-234927
chr22:32023307-32023856	chr22	+	32023395	32023793	True	NM_001007188,NM_014338	chr22,chr22	+,-	DEPDC5,PISD	126275,3067
chr13:40177513-40178909	chr13	+	40177727	40178956	True	NM_020751,NM_005780	chr13,chr13	+,-	COG6,LHFP	50807,-371
chr19:33863353-33863593	chr19	+	33863379	33863485	True	NM_001806,NM_004364	chr19,chr19	+,-	CEBPG,CEBPA	1123,-69949
chr5:180073427-180074543	chr5	+	180073613	180074505	True	NM_002020,NM_182925,NM_015455	chr5,chr5,chr5	-,-,+	FLT4,FLT4,CNOT6	2169,2169,-152247
chr4:48018967-48019294	chr4	+	48019035	48019259	True	NM_000087,NM_207330	chr4,chr4	-,+	CNGA1,NIPAL1	-4074,-295
chr7:74380537-74380762	chr7	+	74380554	74380810	True	NM_001025202,NM_001145063	chr7,chr7	-,+	STAG3L2,GATSL1	-73823,-1522
chr7:74380537-74380762	chr7	-	99868126	99868176	False	NR_028040,NM_001004351,NR_028039,NR_028038,NM_178831	chr7,chr7,chr7,chr7,chr7	-,+,-,-,-	GATS,SPDYE3,GATS,GATS,GATS	1729,37148,1729,1729,1729
chr7:74380537-74380762	chr7	+	72570796	72571052	False	NR_002206,NR_003664,NR_003580	chr7,chr7,chr7	+,-,+	GTF2IP1,SPDYE8P,LOC100093631	-1821,-70487,-1835
chr7:74380537-74380762	chr7	-	74651422	74651678	False	NR_002206,NM_001003795,NR_003580	chr7,chr7,chr7	-,+,-	GTF2IP1,GTF2IRD2B,LOC100093631	1817,-143126,1831
chr7:74380537-74380762	chr7	-	74865639	74865895	False	NM_001145064,NR_003664	chr7,chr7	-,+	GATSL2,SPDYE8P	1496,70637
chr2:187692341-187692983	chr2	+	187692554	187693004	True	NM_182521,NM_177454	chr2,chr2	-,+	ZSWIM2,FAM171B	20949,-133823
chr2:171082702-171083772	chr2	+	171082753	171083782	True	NM_138995,NM_014168	chr2,chr2	+,-	MYO3B,METTL5	-48150,-401400
chr9:46209617-46210396	chr9	+	46210169	46210425	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2579439,477140
chr9:46209617-46210396	chr9	+	45089105	45089155	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-98920,-1458375
chr9:46209617-46210396	chr9	-	46294063	46294113	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2663333,393452
chr6:110300851-110301233	chr6	+	110300856	110301252	True	NM_001024934,NM_005284	chr6,chr6	-,+	WASF1,GPR6	200005,-609
chr8:6566136-6566344	chr8	+	6566205	6566393	True	NM_018361,NM_207411	chr8,chr8	+,-	AGPAT5,XKR5	-378,126823
chr5:65224050-65225559	chr5	+	65224179	65225347	True	NR_028474,NM_001006600,NM_018695	chr5,chr5,chr5	-,+,+	LOC100303749,ERBB2IP,ERBB2IP	16115,-1853,-1853
chr22:24113905-24114855	chr22	+	24114141	24114791	True	NM_213720,NM_005940,NM_182520	chr22,chr22,chr22	-,+,+	CHCHD10,MMP11,C22orf15	-4000,244,-8984
chr9:2275318-2276418	chr9	+	2275364	2275684	True	NM_139045,NR_015375	chr9,chr9	+,-	SMARCA2,FLJ35024	-260074,346739
chr1:202164748-202166601	chr1	+	202165035	202166544	True	NR_037664,NM_021636,NM_001017403	chr1,chr1,chr1	-,+,+	PTPN7,LGR6,LGR6	-34319,6360,-1968
chr4:69052582-69054528	chr4	+	69052760	69054446	True	NR_015446,NM_001129907	chr4,chr4	+,-	FTLP10,TMPRSS11BNL	-4801,29402
chr10:47897297-47897599	chr10	+	47897442	47897504	True	NM_018232,NM_002900	chr10,chr10	+,-	FAM21B,RBP3	-3473,493537
chr10:47897297-47897599	chr10	+	46236307	46236391	False	NM_174890,NM_015262	chr10,chr10	-,+	ANUBL1,FAM21C	-68056,-13735
chr10:47897297-47897599	chr10	+	51841304	51841388	False	NM_018232,NM_001143974	chr10,chr10	+,-	FAM21B,ASAH2	-3494,167054
chr10:72140954-72141267	chr10	+	72140994	72141284	True	NM_018239,NM_207119,NM_018205,NM_004096	chr10,chr10,chr10,chr10	-,-,-,+	LRRC20,LRRC20,LRRC20,EIF4EBP2	1148,180,1148,22576
chr5:176944414-176944621	chr5	+	176944499	176944589	True	NM_001144875,NM_001174102,NM_024872,NM_001144876,NM_016222	chr5,chr5,chr5,chr5,chr5	-,+,-,-,-	DOK3,PRR7,DOK3,DOK3,DDX41	-7072,-69224,-7641,-7072,-532
chr7:27283100-27283431	chr7	+	27283112	27283468	True	NM_001989,NM_000522	chr7,chr7	+,-	EVX1,HOXA13	-999,-43387
chr4:177664183-177664642	chr4	+	177664241	177664660	True	NM_021928,NM_005429	chr4,chr4	+,-	SPCS3,VEGFC	-423203,49297
chr21:45139281-45139486	chr21	+	45139343	45139435	True	NM_003681,NM_000100	chr21,chr21	+,-	PDXK,CSTB	-416,56874
chr11:30037422-30037727	chr11	+	30037476	30037710	True	NM_002233,NM_000510	chr11,chr11	-,+	KCNA4,FSHB	917,214852
chr2:75427539-75427845	chr2	+	75427647	75427777	True	NM_015727,NM_019896,NM_001058	chr2,chr2,chr2	-,+,-	TACR1,POLE4,TACR1	-1002,-241923,-1002
chr2:158697265-158698461	chr2	+	158697318	158698193	True	NM_001105,NM_001135098	chr2,chr2	-,+	ACVR1,UPP2	33481,153497
chr19:58890271-58891284	chr19	+	58890419	58891197	True	NM_138466,NM_001009,NM_001129730	chr19,chr19,chr19	-,+,-	ZNF837,RPS5,ZNF837	1242,7438,1242
chr10:28556819-28557162	chr10	+	28557026	28557186	True	NR_024557,NM_173496	chr10,chr10	+,-	WAC,MPP7	264240,13931
chr12:58159952-58160184	chr12	+	58160082	58160230	True	NM_000785,NM_023033,NM_005371,NM_015433,NM_206914	chr12,chr12,chr12,chr12,chr12	-,-,-,+,+	CYP27B1,METTL1,METTL1,METTL21B,METTL21B	796,5734,5734,6152,6152
chrX:22046456-22048215	chrX	+	22046829	22047999	True	NM_014332,NM_000444	chrX,chrX	-,+	SMPX,PHEX	-270599,2921
chr13:45152505-45153142	chr13	+	45152597	45153110	True	NM_001010897,NM_183422	chr13,chr13	+,-	SERP2,TSC22D1	-204679,-1896
chr7:77426378-77427355	chr7	+	77426492	77427227	True	NM_032936,NM_001127360,NM_001127358	chr7,chr7,chr7	-,+,+	TMEM60,PHTF2,PHTF2	571,881,881
chr16:618274-618598	chr16	+	618356	618614	True	NM_176677,NM_148920,NM_145270,NR_024121,NM_004204	chr16,chr16,chr16,chr16,chr16	+,+,+,-,+	NHLRC4,PIGQ,C16orf11,NCRNA00235,PIGQ	-1375,1389,-7985,-40949,1389
chr20:33295093-33295858	chr20	+	33295098	33295910	True	NM_080476,NM_021202	chr20,chr20	-,+	PIGU,TP53INP2	-30009,-3002
chr7:77169289-77170017	chr7	+	77169306	77170032	True	NM_001131008,NM_001131009,NM_017439,NM_002835	chr7,chr7,chr7,chr7	+,+,-,+	PTPN12,PTPN12,PION,PTPN12	-2005,-2005,-123589,-2584
chr9:139605870-139606277	chr9	+	139606142	139606296	True	NM_152421,NR_002975	chr9,chr9	+,-	FAM69B,SNORA43	727,14443
chrX:77358947-77359384	chrX	+	77359009	77359429	True	NM_000291,NM_015975	chrX,chrX	+,-	PGK1,TAF9B	236,35800
chr2:43903648-43904876	chr2	+	43903670	43904236	True	NM_001101330,NM_172069	chr2,chr2	-,+	LOC728819,PLEKHH2	-209,-39282
chr2:191745043-191745325	chr2	+	191745087	191745317	True	NM_014905,NM_007315	chr2,chr2	+,-	GLS,STAT1	229,133709
chr11:57533390-57534534	chr11	+	57533674	57534414	True	NM_001085468,NM_001085469,NM_001085459,NM_001085458,NM_001085462,NM_001085463,NM_001085460,NM_001085461,NM_001085466,NM_001085467,NM_001085464,NM_001085465,NM_001331,NM_001145101	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,+,+,+,+,+,+,+,+,-	CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,BTBD18	-4492,-4492,-4492,-4492,-4492,-4492,-4492,-4492,-4492,-4492,-4492,-4492,-4492,-14421
chr15:93333035-93333563	chr15	+	93333167	93333581	True	NR_033769,NM_207446	chr15,chr15	+,-	ASB9P1,FAM174B	5132,-134136
chrY:9562996-9563876	chrY	+	9563015	9563751	True	NR_001535,NR_003588,NR_001536	chrY,chrY,chrY	-,-,+	TTTY21,TTTY21B,TTTY2	-4110,-4110,10143
chrY:9562996-9563876	chrY	-	6306628	6307364	False	NR_001535,NR_003590,NR_003588	chrY,chrY,chrY	+,-,+	TTTY21,TTTY2B,TTTY21B	4110,-10143,4110
chr19:50191786-50192498	chr19	+	50191890	50192532	True	NM_001101340,NM_001136052,NM_001571,NM_152359,NM_001199752,NM_001199753	chr19,chr19,chr19,chr19,chr19,chr19	+,+,-,+,+,+	C19orf76,CPT1C,IRF3,CPT1C,CPT1C,CPT1C	1,1832,-22758,1832,1832,1832
chr9:88355523-88356296	chr9	+	88355752	88356230	True	NR_029410,NM_015239	chr9,chr9	+,-	LOC389765,AGTPBP1	64686,764
chr14:93601904-93602448	chr14	+	93601934	93602488	True	NM_015676,NM_014216	chr14,chr14	+,-	C14orf109,ITPK1	48807,-19671
chr8:42951313-42951525	chr8	+	42951407	42951521	True	NR_027669,NM_032237	chr8,chr8	-,+	RNF170,SGK196	-199541,-2801
chrX:70287551-70287819	chrX	+	70287574	70287864	True	NM_001170931,NM_013346	chrX,chrX	+,-	FOXO4,SNX12	28134,417
chr15:75640004-75640328	chr15	+	75640165	75640227	True	NR_030360,NM_024608	chr15,chr15	-,+	MIR631,NEIL1	5849,-885
chr5:86566457-86566844	chr5	+	86566544	86566778	True	NM_001199189,NM_002890,NM_022650	chr5,chr5,chr5	-,+,+	CCNH,RASA1,RASA1	141993,-2449,-1834
chr11:63974567-63974770	chr11	+	63974570	63974760	True	NM_178443,NM_001160393,NM_031471	chr11,chr11,chr11	+,-,+	FERMT3,TRPT1,FERMT3	-469,18631,-469
chr15:78911855-78912077	chr15	+	78911916	78912114	True	NM_001166694,NM_000743,NM_000745	chr15,chr15,chr15	-,-,+	CHRNA3,CHRNA3,CHRNA5	1573,1573,-54105
chr11:67441515-67442247	chr11	+	67441553	67442293	True	NM_007103,NM_000695,NM_001031615	chr11,chr11,chr11	+,-,-	NDUFV1,ALDH3B2,ALDH3B2	-67281,-39,6442
chr6:32631147-32632209	chr6	+	32631172	32632022	True	NM_002122,NM_002123	chr6,chr6	+,-	HLA-DQA1,HLA-DQB1	-26054,2494
chr16:21830768-21831738	chr16	+	21830781	21831689	True	NM_170664,NR_003370	chr16,chr16	+,-	OTOA,RRN3P1	-114561,-286
chr12:104235399-104235917	chr12	+	104235405	104235961	True	NM_003299,NM_001031701	chr12,chr12	+,-	HSP90B1,NT5DC3	88227,-430
chr2:69665898-69666388	chr2	+	69665921	69666360	True	NM_001002755,NM_001153,NM_001002757,NM_001002756,NM_015700	chr2,chr2,chr2,chr2,chr2	-,+,-,-,-	NFU1,ANXA4,NFU1,NFU1,NFU1	-1168,302766,-1168,-1168,-1168
chr14:21863236-21864314	chr14	+	21863304	21864143	True	NR_002916,NM_014828,NR_003029	chr14,chr14,chr14	-,+,-	SNORD8,TOX4,SNORD9	1468,81191,-2892
chr1:14702351-14703051	chr1	+	14702407	14702865	True	NM_015209,NR_027136	chr1,chr1	+,-	KAZN,C1orf126	222347,776145
chr19:17418082-17419071	chr19	+	17418218	17419096	True	NM_024050,NM_024527,NM_023937	chr19,chr19,chr19	+,-,+	DDA1,ABHD8,MRPL34	1240,-3936,-1793
chr7:89874518-89874732	chr7	+	89874591	89874709	True	NM_001039706,NM_001160138,NM_152706	chr7,chr7,chr7	+,+,-	C7orf63,C7orf63,C7orf62	-154,-154,-1449560
chr11:60870981-60872129	chr11	+	60871391	60872177	True	NM_017966,NM_014207	chr11,chr11	-,+	VPS37C,CD5	56789,-1512
chr2:95690167-95690475	chr2	+	95690224	95690520	True	NR_037597,NM_022440,NM_022438,NM_002371,NM_022439	chr2,chr2,chr2,chr2,chr2	-,+,+,+,+	LOC442028,MAL,MAL,MAL,MAL	-77137,958,958,958,958
chr5:167956881-167957131	chr5	+	167956887	167957179	True	NR_029520,NR_024356	chr5,chr5	-,+	MIR103-1,FBLL1	30849,-356
chr4:6642401-6642622	chr4	+	6642407	6642547	True	NM_033296,NM_203462	chr4,chr4	+,-	MRFAP1,MRFAP1L1	-13,69109
chr2:136634060-136634517	chr2	+	136634082	136634511	True	NM_014607,NM_005915	chr2,chr2	+,-	UBXN4,MCM6	-134944,-71
chr12:104534262-104534771	chr12	+	104534282	104534669	True	NM_006166,NM_001093771	chr12,chr12	-,+	NFYB,TXNRD1	-2242,74889
chr17:27048294-27048983	chr17	+	27048473	27048965	True	NM_001144942,NR_024575,NR_024579,NM_178170,NM_000984,NR_000014,NM_001144943,NM_031934,NR_000010,NR_000013,NM_152465,NM_138463,NM_001142625,NM_001160407,NM_001142624,NR_000009	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,+,+,+,-,-,+,+,-,-,-,-,-,+	RAB34,RAB34,RAB34,NEK8,RPL23A,SNORD42A,RAB34,RAB34,SNORD4A,SNORD42B,PROCA1,TLCD1,RAB34,TLCD1,RAB34,SNORD4B	-3565,-3222,-3222,6866,-1525,1481,-3187,-3565,634,-957,-9601,4315,-3187,5034,-3187,1733
chr2:31806171-31806433	chr2	+	31806178	31806318	True	NM_014600,NM_000348	chr2,chr2	+,-	EHD3,SRD5A2	-349349,-138
chr5:80690497-80691200	chr5	+	80690501	80691184	True	NM_032280,NM_130767	chr5,chr5	+,-	ZCCHC9,ACOT12	-93150,-513
chr6:24646723-24647485	chr6	+	24646965	24647232	True	NM_001160094,NM_001168374,NM_001168375,NM_001168376,NM_014809,NM_001168377	chr6,chr6,chr6,chr6,chr6,chr6	+,-,-,-,-,-	ACOT13,KIAA0319,KIAA0319,KIAA0319,KIAA0319,KIAA0319	20030,-582,-716,-716,-582,-582
chr4:140199303-140200764	chr4	+	140199606	140200558	True	NM_057175,NM_032623	chr4,chr4	+,-	NAA15,C4orf49	22117,984
chr16:87798807-87799020	chr16	+	87798821	87799017	True	NM_020655,NM_001184856,NM_017566,NM_001184854	chr16,chr16,chr16,chr16	+,-,-,-	JPH3,KLHDC4,KLHDC4,KLHDC4	-162373,631,631,631
chr17:34260514-34261838	chr17	+	34260899	34261847	True	NM_001163124,NM_001163125,NM_001034836,NM_001163120,NM_001163121,NM_001163122,NM_001163130,NM_020426,NM_145654,NM_003487,NR_027999,NR_027998,NR_027997,NR_027996,NR_028000,NM_001199951	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,-,-,-,-,+,-,-,-,-,-,-	RDM1,RDM1,RDM1,RDM1,RDM1,RDM1,RDM1,LYZL6,RDM1,TAF15,RDM1,RDM1,RDM1,RDM1,RDM1,LYZL6	-3596,-3596,-3119,-3119,-3119,-3596,-3596,4763,-3119,-124469,-3596,-3119,-3119,-3119,-3596,8906
chr10:103111686-103112564	chr10	+	103111730	103112357	True	NM_006562,NM_003939,NM_033637	chr10,chr10,chr10	-,+,+	LBX1,BTRC,BTRC	-123013,1467,1467
chr11:2322995-2323217	chr11	+	2323049	2323139	True	NM_139022,NM_001142946,NR_024621	chr11,chr11,chr11	+,-,-	TSPAN32,C11orf21,C11orf21	103,54,54
chr12:74932171-74934085	chr12	+	74932214	74934117	True	NM_001136262,NM_139136	chr12,chr12	+,-	ATXN7L3B,KCNC2	-714,669444
chr3:196263494-196264237	chr3	+	196263507	196264037	True	NM_001105573,NM_001077657	chr3,chr3	+,-	FBXO45,C3orf43	31687,-21270
chr5:156393716-156394661	chr5	+	156393719	156394611	True	NM_138379,NM_001146726,NR_028472	chr5,chr5,chr5	-,-,+	TIMD4,TIMD4,LOC100286948	-3453,-3453,-42670
chr9:139438671-139439097	chr9	+	139439022	139439138	True	NM_017617,NM_152571	chr9,chr9	-,+	NOTCH1,C9orf163	1150,-61126
chrX:151144688-151145014	chrX	+	151144787	151145050	True	NM_004961,NM_001011550	chrX,chrX	-,+	GABRE,MAGEA4	-1636,-58078
chr6:88038958-88039302	chr6	+	88039290	88039350	True	NM_020425,NM_001042493,NM_198568	chr6,chr6,chr6	+,+,-	C6orf162,C6orf162,GJB7	-7037,-7037,-294
chr9:19102567-19102819	chr9	+	19102754	19102866	True	NM_006570,NM_017645	chr9,chr9	+,-	RRAGA,HAUS6	-53433,86
chr15:35413380-35413897	chr15	+	35413426	35413910	True	NM_014106,NR_003144	chr15,chr15	-,+	ZNF770,LOC723972	-132929,115616
chr9:21369536-21370030	chr9	+	21369662	21369911	True	NM_006900,NM_002170	chr9,chr9	-,+	IFNA13,IFNA8	-1587,39234
chr20:62168329-62168601	chr20	+	62168391	62168635	True	NM_005975,NM_024059	chr20,chr20	-,+	PTK6,C20orf195	122,15737
chr11:48000698-48001603	chr11	+	48000804	48001460	True	NM_002843,NM_015231,NM_001098503	chr11,chr11,chr11	+,-,+	PTPRJ,NUP160,PTPRJ	649,-130747,649
chr19:51529997-51530538	chr19	+	51530113	51530392	True	NM_145894,NM_145895,NM_019598,NM_002776,NM_001136032,NM_145888,NM_001077500,NM_001167605,NM_006853,NM_144947,NM_014441	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,-,-,-,+	KLK12,KLK12,KLK12,KLK10,KLK11,KLK10,KLK10,KLK11,KLK11,KLK11,SIGLEC9	7813,7813,7813,-6831,-241,-7159,-6682,955,955,550,97744
chr8:74205287-74205631	chr8	+	74205326	74205670	True	NM_000971,NM_172037	chr8,chr8	-,+	RPL7,RDH10	249,1594
chr14:78169793-78170873	chr14	+	78170283	78170809	True	NM_031210,NM_006020	chr14,chr14	+,-	C14orf156,ALKBH1	3615,3597
chr11:845412-847312	chr11	+	845695	847013	True	NM_003271,NM_021128,NM_001025239,NM_001025238,NM_001025235,NM_001025234,NM_001025237,NM_001025236	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,-,+,+,+,+,+,+	TSPAN4,POLR2L,TSPAN4,TSPAN4,TSPAN4,TSPAN4,TSPAN4,TSPAN4	-2922,-3166,-2922,-2922,-2805,-1665,-1300,-2805
chr6:122793424-122794111	chr6	+	122793576	122793901	True	NM_020755,NM_181794	chr6,chr6	-,+	SERINC1,PKIB	-624,-578
chr19:37861424-37861853	chr19	+	37861509	37861731	True	NM_032453,NM_152484	chr19,chr19	+,-	ZNF527,ZNF569	327,96658
chr3:142147092-142148283	chr3	+	142147352	142148332	True	NM_001145319,NM_001042604	chr3,chr3	+,-	PLS1,XRN1	166896,18571
chr7:101272094-101273722	chr7	+	101272145	101273606	True	NM_138403,NM_001202543	chr7,chr7	-,+	MYL10,CUX1	124,185577
chr11:113346244-113347101	chr11	+	113346275	113347129	True	NM_016574,NM_178510,NM_000795	chr11,chr11,chr11	-,+,-	DRD2,ANKK1,DRD2	-274,-87813,-274
chr8:146013413-146013715	chr8	+	146013412	146013756	True	NM_000973,NM_033301,NM_030580,NM_213605	chr8,chr8,chr8,chr8	-,-,-,+	RPL8,RPL8,ZNF34,ZNF517	4099,4023,-687,10504
chr20:17207737-17207987	chr20	+	17207772	17208022	True	NM_001201529,NM_001201528,NM_002594,NM_001195	chr20,chr20,chr20,chr20	+,+,+,-	PCSK2,PCSK2,PCSK2,BFSP1	-226,-1071,-226,304041
chr5:141019876-141020854	chr5	+	141020001	141020872	True	NM_001130029,NM_173828,NM_003883	chr5,chr5,chr5	+,+,-	RELL2,RELL2,HDAC3	-3535,-3535,-3578
chr1:151431695-151432056	chr1	+	151431991	151432103	True	NM_001194937,NM_020770,NM_015100,NM_001194938,NM_145796	chr1,chr1,chr1,chr1,chr1	-,+,-,-,-	POGZ,CGN,POGZ,POGZ,POGZ	-50,51758,-50,-50,-50
chr6:148661223-148661846	chr6	+	148661235	148661895	True	NR_034115,NM_015278	chr6,chr6	-,+	LOC729178,SASH1	-1135485,1833
chr2:131115351-131116494	chr2	+	131115586	131116540	True	NM_032357,NM_001142370,NM_014369	chr2,chr2,chr2	-,+,+	CCDC115,PTPN18,PTPN18	-15664,-2057,-2057
chr16:87638792-87639336	chr16	+	87638814	87639362	True	NM_020655,NM_015144	chr16,chr16	+,-	JPH3,ZCCHC14	-2366,-113354
chr8:28174108-28174632	chr8	+	28174132	28174598	True	NM_018660,NM_006228	chr8,chr8	-,+	ZNF395,PNOC	69429,50
chr17:61935271-61935635	chr17	+	61935272	61935396	True	NM_001098426,NR_002947	chr17,chr17	-,+	SMARCD2,TCAM1P	-14921,-950
chr1:210001906-210002208	chr1	+	210002035	210002096	True	NM_006147,NM_014388	chr1,chr1	-,+	IRF6,DIEXF	-22556,-774
chr16:90039954-90040415	chr16	+	90040173	90040439	True	NR_003227,NR_003226,NR_003228,NM_145039	chr16,chr16,chr16,chr16	+,+,+,-	AFG3L1P,AFG3L1P,AFG3L1P,CENPBD1	-1248,-1248,-1248,-933
chr1:39315282-39315732	chr1	+	39315476	39315608	True	NM_001136275,NM_022157	chr1,chr1	+,-	AKIRIN1,RRAGC	141307,9790
chr19:6990409-6990821	chr19	+	6990634	6990858	True	NR_024075,NM_001136507	chr19,chr19	-,+	EMR4P,MBD3L5	49,39735
chr21:11136147-11138062	chr21	+	11136532	11137886	True	NM_001187,NR_037458	chr21,chr21	-,+	BAGE,MIR3687	-37595,-1310380
chr10:99492961-99493507	chr10	+	99493118	99493221	True	NM_001002261,NM_001002262,NM_001174119,NM_001174120,NM_001174121,NM_001174122,NM_144588,NR_026754	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,+,+,-	ZFYVE27,ZFYVE27,ZFYVE27,ZFYVE27,ZFYVE27,ZFYVE27,ZFYVE27,LOC100270710	5012,3656,3656,3656,3656,3656,3656,-15216
chr15:41694067-41694531	chr15	+	41694231	41694466	True	NM_016013,NM_015138	chr15,chr15	-,+	NDUFAF1,RTF1	229,14835
chr16:30043501-30044059	chr16	+	30043609	30043932	True	NM_031478,NM_001109660,NM_001109659	chr16,chr16,chr16	-,+,+	FAM57B,C16orf92,C16orf92	-1423,-9007,-9007
chrX:119254573-119255036	chrX	+	119254626	119255064	True	NM_139282,NM_032498	chrX,chrX	-,+	RHOXF1,RHOXF2	-4779,37402
chr19:6373182-6373628	chr19	+	6373479	6373557	True	NM_004158,NM_032306	chr19,chr19	-,+	PSPN,ALKBH7	2353,-1086
chr6:70598092-70598539	chr6	+	70598149	70598390	True	NM_018368,NM_001858	chr6,chr6	-,+	LMBRD1,COL19A1	-91100,-21752
chr3:195873651-195875463	chr3	+	195874155	195875171	True	NR_034088,NM_001039617	chr3,chr3	+,-	LOC401109,ZDHHC19	-4705,63179
chr4:110734999-110735618	chr4	+	110735129	110735478	True	NM_018983,NM_000204,NM_032993	chr4,chr4,chr4	+,-,+	GAR1,CFI,GAR1	1187,-11794,1187
chr5:148409293-148411120	chr5	+	148409623	148411012	True	NM_024577,NM_014945	chr5,chr5	-,+	SH3TC2,ABLIM3	31782,110041
chr1:17574985-17575418	chr1	+	17575169	17575329	True	NM_016233,NM_007365	chr1,chr1	+,-	PADI3,PADI2	263,-129221
chr7:4925422-4926214	chr7	+	4925422	4926262	True	NM_018059,NR_015449	chr7,chr7	-,+	RADIL,RNF216L	-2087,87353
chr6:15932103-15933336	chr6	+	15932741	15932872	True	NM_013262,NR_036448	chr6,chr6	+,-	MYLIP,DTNBP1	196444,-269452
chr12:14718119-14719749	chr12	+	14718525	14719493	True	NM_024829,NM_018179	chr12,chr12	-,+	PLBD1,ATF7IP	1354,-199965
chr12:121164034-121164644	chr12	+	121164193	121164451	True	NM_000017,NM_198202	chr12,chr12	+,-	ACADS,POP5	-673,-144992
chr8:11726959-11727825	chr8	+	11727196	11727579	True	NM_001908,NM_147782,NM_147783,NM_147780,NM_147781,NM_004462	chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,-,+	CTSB,CTSB,CTSB,CTSB,CTSB,FDFT1	-1550,-1550,-1550,-1550,-1550,-67057
chr11:57336408-57336939	chr11	+	57336613	57336913	True	NM_004223,NM_001105565,NM_198183	chr11,chr11,chr11	-,+,-	UBE2L6,SMTNL1,UBE2L6	-1433,-26552,-1160
chr3:111575602-111576521	chr3	+	111575606	111576497	True	NM_024508,NM_145753,NM_001134438,NM_001134439	chr3,chr3,chr3,chr3	-,+,+,+	ZBED2,PHLDB2,PHLDB2,PHLDB2	-261440,1529,1529,2070
chr1:243996281-243997220	chr1	+	243996895	243997272	True	NR_033883,NM_181690,NM_005465	chr1,chr1,chr1	+,-,-	LOC339529,AKT3,AKT3	83431,9337,9337
chr16:67225211-67225893	chr16	+	67225356	67225748	True	NM_024712,NM_001950,NM_178516,NM_001040715	chr16,chr16,chr16,chr16	+,+,-,-	ELMO3,E2F4,EXOC3L1,KIAA0895L	7279,319,-1249,-7473
chr15:44086160-44086415	chr15	+	44086215	44086458	True	NM_016400,NM_001199885,NM_001033517,NM_001018108,NR_037673,NR_037672,NM_001199878,NM_001199876,NR_031695,NM_001199875	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,-,+,+,+,+,+,-,+	C15orf63,C15orf63,SERINC4,SERF2,SERF2-C15ORF63,SERF2,SERF2,SERF2,MIR1282,SERF2	6160,6160,5848,-2228,-2094,-2094,-1693,-2094,-258,-2094
chr1:78957251-78957466	chr1	+	78957263	78957411	True	NM_001039585,NM_000959,NM_003902	chr1,chr1,chr1	+,+,-	PTGFR,PTGFR,FUBP1	-586,-586,-512486
chr1:224042475-224043332	chr1	+	224042843	224043252	True	NM_001031685,NM_005426,NM_001748	chr1,chr1,chr1	-,-,+	TP53BP2,TP53BP2,CAPN2	-9169,-9169,-142784
chr7:102283160-102284261	chr7	+	102283708	102284187	True	NM_001114403,NM_001166339,NM_001031618	chr7,chr7,chr7	-,+,+	UPK3BL,SPDYE2L,SPDYE2	-470,6584,6584
chr7:102283160-102284261	chr7	+	44030577	44030627	False	NM_175064,NR_003655	chr7,chr7	+,-	SPDYE1,POLR2J4	9861,28171
chr7:102283160-102284261	chr7	+	102184614	102184991	False	NM_001031618,NM_001166339,NM_001097615	chr7,chr7,chr7	+,+,-	SPDYE2,SPDYE2L,POLR2J3	6687,6687,28127
chr13:95248669-95249148	chr13	+	95248713	95249153	True	NM_014305,NM_180989	chr13,chr13	-,+	TGDS,GPR180	-202,4950
chr7:75368537-75368771	chr7	+	75368561	75368779	True	NM_001040456,NM_005338	chr7,chr7	+,-	RHBDD2,HIP1	139537,-282
chr10:121661588-121662331	chr10	+	121661883	121662302	True	NM_024834,NM_007190,NR_037771	chr10,chr10,chr10	-,+,+	MCMBP,SEC23IP,SEC23IP	-29489,-9859,-9859
chr15:65206965-65207562	chr15	+	65206971	65207607	True	NM_182703,NM_001127889	chr15,chr15	+,-	ANKDD1A,SPG21	-2921,74255
chr15:72947525-72947782	chr15	+	72947585	72947645	True	NR_002780,NM_018652	chr15,chr15	-,+	HIGD2B,GOLGA6B	30895,-598
chr15:72947525-72947782	chr15	-	78218600	78218660	False	NM_001101404,NR_027024	chr15,chr15	+,-	SH2D7,LOC645752	166266,578
chr15:72947525-72947782	chr15	-	74374283	74374343	False	NM_001130136,NM_001038640	chr15,chr15	+,-	ISLR2,GOLGA6A	47371,598
chr15:72947525-72947782	chr15	+	75575723	75575783	False	NR_030360,NM_001145224	chr15,chr15	-,+	MIR631,GOLGA6D	70293,-592
chr4:152684360-152686180	chr4	+	152684411	152686132	True	NM_004564,NM_001109977	chr4,chr4	-,+	PET112L,FAM160A1	-2236,-354073
chr15:85921646-85922153	chr15	+	85921966	85922163	True	NM_007200,NR_031682,NM_006738	chr15,chr15,chr15	+,-,+	AKAP13,MIR1276,AKAP13	1707,391696,1707
chr17:39745139-39745366	chr17	+	39745139	39745410	True	NM_005801,NM_000526	chr17,chr17	+,-	EIF1,KRT14	99716,-1992
chr19:12405871-12406625	chr19	+	12405877	12406277	True	NM_003437,NM_001164276,NM_016264	chr19,chr19,chr19	+,-,-	ZNF136,ZNF44,ZNF44	-132056,-163,-163
chr4:968339-968601	chr4	+	968393	968647	True	NM_000203,NM_001347	chr4,chr4	+,-	IDUA,DGKQ	12137,-1049
chr18:61783817-61784317	chr18	+	61783856	61784348	True	NR_027245,NR_033881	chr18,chr18	-,+	C18orf20,LOC284294	31968,-12595
chr17:40264343-40265540	chr17	+	40264348	40265327	True	NM_024119,NM_021078,NM_033194	chr17,chr17,chr17	-,-,+	DHX58,KAT2A,HSPB9	-50,8105,9428
chr5:10591229-10592656	chr5	+	10591229	10592291	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-26852,169146
chr10:28289039-28289696	chr10	+	28289210	28289654	True	NM_021252,NM_018076	chr10,chr10	+,-	RAB18,ARMC4	-496019,-1233
chr14:23938494-23938900	chr14	+	23938543	23938907	True	NM_000257,NM_001042635,NM_015514	chr14,chr14,chr14	-,+,+	MYH7,NGDN,NGDN	-33673,-10,-10
chrX:38080147-38080376	chrX	+	38080264	38080424	True	NM_006307,NM_000531,NM_001170752,NM_001170751,NM_001170750	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	SRPX,OTC,SRPX,SRPX,SRPX	-87,131311,-87,-87,-87
chr1:247275837-247276354	chr1	+	247275939	247276266	True	NM_024804,NM_001142572,NM_207401,NM_173858	chr1,chr1,chr1,chr1	-,-,-,+	ZNF669,ZNF669,C1orf229,VN1R5	-8265,-8265,-220,143107
chr1:47396552-47398481	chr1	+	47396618	47398444	True	NM_000778,NM_178033	chr1,chr1	-,+	CYP4A11,CYP4X1	8762,90795
chr12:105503672-105503939	chr12	+	105503696	105503875	True	NR_027752,NM_015275	chr12,chr12	-,+	ALDH1L2,KIAA1033	-25355,-2262
chr13:70682210-70682430	chr13	+	70682224	70682472	True	NR_002717,NM_020866	chr13,chr13	+,-	ATXN8OS,KLHL1	-930,203
chr18:61148001-61149706	chr18	+	61148331	61149567	True	NM_004869,NM_002639	chr18,chr18	-,+	VPS4B,SERPINB5	-58579,-4239
chr7:101926386-101926597	chr7	+	101926403	101926591	True	NR_036245,NM_020979,NM_001146210	chr7,chr7,chr7	+,+,-	MIR4285,SH2B2,SPDYE6	9777,1813,70348
chr14:31025634-31027209	chr14	+	31025774	31027104	True	NM_017769,NR_030354	chr14,chr14	+,-	G2E3,MIR624	1224,456901
chr7:99703295-99704378	chr7	+	99703416	99704152	True	NM_004722,NM_182776,NM_005916	chr7,chr7,chr7	+,-,-	AP4M1,MCM7,MCM7	-4337,-5036,-3989
chr4:38669542-38671233	chr4	+	38669596	38671179	True	NM_016531,NR_026804	chr4,chr4	+,-	KLF3,FLJ13197	-3863,-3347
chr15:100105894-100106142	chr15	+	100105920	100106170	True	NM_001171894,NM_001130926,NM_001130927,NM_005587,NM_152449	chr15,chr15,chr15,chr15,chr15	+,+,+,+,-	MEF2A,MEF2A,MEF2A,MEF2A,LYSMD4	-38,-38,-38,-38,167506
chr1:201982459-201982987	chr1	+	201982500	201983032	True	NM_012134,NM_004433,NM_001114309	chr1,chr1,chr1	-,+,+	LMOD1,ELF3,ELF3	-66784,-2861,-2861
chr15:64453846-64454311	chr15	+	64454074	64454350	True	NM_024798,NM_000942	chr15,chr15	+,-	SNX22,PPIB	-10209,1054
chr6:144473202-144473929	chr6	+	144473205	144473754	True	NM_031287,NM_003764	chr6,chr6	-,+	SF3B5,STX11	-56451,-1610
chr2:129277636-129278115	chr2	+	129277714	129278014	True	NM_004807,NR_027671	chr2,chr2	-,+	HS6ST1,UGGT1	-201543,-428983
chr7:44120426-44121268	chr7	+	44120582	44121241	True	NM_013284,NM_001129	chr7,chr7	-,+	POLM,AEBP1	939,22718
chr11:82612541-82612751	chr11	+	82612619	82612789	True	NM_005040,NM_145018,NM_199418	chr11,chr11,chr11	-,+,-	PRCP,C11orf82,PRCP	-1062,45,-1062
chr8:77913023-77914289	chr8	+	77913126	77914038	True	NM_024721,NM_001172087,NM_001172086,NM_001079867,NM_000318	chr8,chr8,chr8,chr8,chr8	+,-,-,-,-	ZFHX4,PEX2,PEX2,PEX2,PEX2	-319662,-4,-4,-602,-602
chr4:53698-54303	chr4	+	53853	54033	True	NM_182524,NM_001039127,NM_001137608	chr4,chr4,chr4	+,+,-	ZNF595,ZNF718,ZNF732	-677,-627,235961
chr19:49555876-49556611	chr19	+	49556251	49556527	True	NM_033183,NM_033043,NM_033142	chr19,chr19,chr19	-,+,-	CGB8,CGB5,CGB7	-3883,-9200,2520
chr14:101423115-101425069	chr14	+	101423153	101425006	True	NR_003201,NR_003200,NR_003203,NR_003204,NR_003193,NR_003195,NR_003194,NR_003197,NR_003196,NR_003199,NR_003198,NM_001134888	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,+,+,+,+,+,+,+,+,-	SNORD114-9,SNORD114-8,SNORD114-10,SNORD114-11,SNORD114-1,SNORD114-3,SNORD114-2,SNORD114-5,SNORD114-4,SNORD114-7,SNORD114-6,RTL1	7359,6111,8382,9441,-7034,-3518,-5011,-1497,-2523,4384,-40,-71969
chr2:175474063-175475637	chr2	+	175474140	175475499	True	NM_003387,NM_024583	chr2,chr2	-,+	WIPF1,SCRN3	23858,-213742
chr4:164395013-164395931	chr4	+	164395024	164395813	True	NM_032136,NM_018352	chr4,chr4	-,+	TKTL2,C4orf43	23,19859
chr17:74263258-74264033	chr17	+	74263406	74264083	True	NM_052916,NM_182565	chr17,chr17	-,+	RNF157,FAM100B	-27016,-2171
chrX:22048867-22049982	chrX	+	22049083	22049823	True	NM_014332,NM_000444	chrX,chrX	-,+	SMPX,PHEX	-272853,1097
chr2:241831200-241832222	chr2	+	241831391	241832121	True	NM_001085437,NM_024861,NM_000030	chr2,chr2,chr2	-,-,+	C2orf54,C2orf54,AGXT	3502,21,-23280
chr10:44286072-44287259	chr10	+	44286117	44287073	True	NR_033923,NR_002726	chr10,chr10	+,-	C10orf136,HNRNPA3P1	53680,-252
chr14:105220595-105220912	chr14	+	105220601	105220893	True	NM_005163,NM_021709,NM_006427	chr14,chr14,chr14	-,+,+	AKT1,SIVA1,SIVA1	39095,-1182,-1182
chr10:131264412-131264954	chr10	+	131264517	131264831	True	NM_002412,NR_036179	chr10,chr10	+,-	MGMT,MIR4297	622,376857
chrX:122995639-122996106	chrX	+	122995643	122995733	True	NM_001167,NM_001204401,NR_037916,NM_001081550	chrX,chrX,chrX,chrX	+,+,+,-	XIAP,XIAP,XIAP,THOC2	-1690,-2045,-1690,-128739
chr1:100333373-100334022	chr1	+	100333379	100333704	True	NM_000645,NM_001013660	chr1,chr1	+,-	AGL,FRRS1	-6665,-102030
chrX:55756961-55757555	chrX	+	55757006	55757568	True	NM_201286,NM_016656	chrX,chrX	-,+	USP51,RRAGB	-241375,-12949
chrX:153209141-153209456	chrX	+	153209255	153209425	True	NM_003491,NM_002910,NM_003492	chrX,chrX,chrX	-,-,+	NAA10,RENBP,TMEM187	-8787,857,28565
chr12:121731466-121732201	chr12	+	121731529	121732151	True	NM_002560,NM_153500,NM_153499,NM_172214,NM_172215,NM_172216,NM_006549,NM_172226	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,-,-,-,-,-,-,-	P2RX4,CAMKK2,CAMKK2,CAMKK2,CAMKK2,CAMKK2,CAMKK2,CAMKK2	-83916,4010,4010,4010,4010,4010,4010,2455
chr7:27220404-27220972	chr7	+	27220594	27220896	True	NM_005523,NM_018951,NR_037940,NR_037939,NM_153715,NR_002795	chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,+	HOXA11,HOXA10,HOXA10-HOXA9,HOXA10,HOXA10,HOXA11-AS1	3989,-6639,-714,-714,-718,4130
chr5:137367296-137368251	chr5	+	137367460	137368026	True	NR_037900,NM_001101801,NM_001101800,NM_016603	chr5,chr5,chr5,chr5	+,-,-,-	LOC100130172,FAM13B,FAM13B,FAM13B	436,826,826,826
chr11:44087802-44088193	chr11	+	44087801	44088123	True	NM_032592,NM_021926,NM_001127219	chr11,chr11,chr11	+,-,+	ACCS,ALX4,ACCS	-40,243643,-123
chr19:19432544-19432897	chr19	+	19432655	19432805	True	NM_172231,NM_015329	chr19,chr19	-,+	SUGP1,MAU2	-1348,-1076
chr7:135656855-135658459	chr7	+	135657173	135658312	True	NM_145808,NM_001130929,NM_001128619	chr7,chr7,chr7	-,+,-	MTPN,PL-5283,LUZP6	3950,-310015,3950
chrX:20152625-20154456	chrX	+	20152998	20154472	True	NR_023358,NM_001173456,NM_001412	chrX,chrX,chrX	-,+,-	SCARNA9L,PDHA1,EIF1AX	109,-791052,5544
chr14:71374557-71374762	chr14	+	71374623	71374729	True	NM_014982,NM_033141	chr14,chr14	+,-	PCNX,MAP3K9	-552,-98735
chr14:75083493-75084129	chr14	+	75083497	75084075	True	NM_015962,NM_000428	chr14,chr14	+,-	FCF1,LTBP2	95774,-4463
chr9:66499968-66500681	chr9	+	66499968	66500593	True	NR_024443,NR_024496	chr9,chr9	-,+	LOC100133920,LOC442421	530439,-5750
chr9:66499968-66500681	chr9	-	68371496	68371651	False	NR_033907,NR_034006	chr9,chr9	-,+	LOC642236,LOC100132352	82774,354889
chr9:66499968-66500681	chr9	+	45362804	45362959	False	NM_001145196,NR_024060	chr9,chr9	-,+	FAM75A6,FAM27A	-1732074,364069
chr7:76092908-76093601	chr7	+	76092923	76093643	True	NM_020892,NR_003262,NM_001102594,NM_001102595	chr7,chr7,chr7,chr7	+,-,+,+	DTX2,FDPSL2A,DTX2,DTX2	-2004,10724,-2004,-2004
chr7:76092908-76093601	chr7	+	76591035	76591541	False	NR_023383,NM_006682	chr7,chr7	+,-	PMS2P11,FGL2	18597,237659
chr3:42452633-42453332	chr3	+	42452735	42453332	True	NM_004624,NM_144634	chr3,chr3	+,-	VIPR1,LYZL4	90771,-670
chr5:149680269-149680589	chr5	+	149680323	149680581	True	NM_001008657,NM_001012301	chr5,chr5	+,-	TCOF1,ARSI	56620,1994
chr12:109746357-109746846	chr12	+	109746384	109746761	True	NM_213596,NM_001101421	chr12,chr12	-,+	FOXN4,MYO1H	314,79762
chr1:205291032-205291575	chr1	+	205291138	205291465	True	NM_014858,NM_030952	chr1,chr1	+,-	TMCC2,NUAK2	-94151,-255
chr7:72685941-72686484	chr7	+	72686132	72686347	True	NR_002164,NR_003186	chr7,chr7	-,+	GTF2IRD2P1,NCF1B	-474,-51521
chr7:72685941-72686484	chr7	+	74240057	74240272	False	NM_173537,NM_000265	chr7,chr7	-,+	GTF2IRD2,NCF1	27628,-51811
chr7:72685941-72686484	chr7	-	74536001	74536216	False	NM_030798,NM_001003795	chr7,chr7	-,+	WBSCR16,GTF2IRD2B	-46302,-27714
chr18:43654396-43655844	chr18	+	43654569	43655706	True	NM_024430,NM_138443	chr18,chr18	-,+	PSTPIP2,HAUS1	-2319,28591
chr2:202044548-202045252	chr2	+	202044729	202045254	True	NM_001230,NM_032977,NM_032974,NM_173822	chr2,chr2,chr2,chr2	+,+,+,-	CASP10,CASP10,CASP10,FAM126B	2366,2366,2366,-108337
chr22:35878349-35878684	chr22	+	35878349	35878543	True	NM_005368,NM_014310	chr22,chr22	-,+	MB,RASD2	134891,58808
chr1:47072935-47073136	chr1	+	47073076	47073154	True	NM_201403,NM_198973,NM_001145474,NM_003684,NR_024174,NM_001135553,NR_024176,NM_145279	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,+,-,-,-,-,-	MOBKL2C,MKNK1,C1orf223,MKNK1,MKNK1,MKNK1,MKNK1,MOBKL2C	9459,-3110,64345,-3110,-3110,-3110,-3110,7701
chr7:2670121-2670474	chr7	+	2670120	2670462	True	NM_152743,NM_025250	chr7,chr7	-,+	BRAT1,TTYH3	-74728,1140
chr10:30908592-30910142	chr10	+	30909178	30909946	True	NM_183058,NM_005204	chr10,chr10	-,+	LYZL2,MAP3K8	8753,-186363
chr1:152552842-152553757	chr1	+	152553085	152553660	True	NM_178434,NM_032563	chr1,chr1	+,-	LCE3C,LCE3D	19477,-105
chr14:24551172-24551387	chr14	+	24551226	24551382	True	NM_006177,NM_006032	chr14,chr14	-,+	NRL,CPNE6	2500,-10521
chr6:17276158-17277167	chr6	+	17276482	17277165	True	NM_001143941,NM_001143942,NM_005124,NM_153020	chr6,chr6,chr6,chr6	+,+,-,+	RBM24,RBM24,NUP153,RBM24	5129,4643,429703,5766
chr5:57752906-57753822	chr5	+	57753016	57753782	True	NM_006622,NM_152687	chr5,chr5	-,+	PLK2,GAPT	2193,33547
chrY:19884099-19885896	chrY	+	19884353	19885791	True	NM_004677,NM_004825,NM_001002906	chrY,chrY,chrY	-,+,-	XKRY,CDY2A,XKRY2	-1913,251875,-1913
chrY:19884099-19885896	chrY	-	20293984	20295421	False	NM_004677,NM_001002906,NR_028083	chrY,chrY,chrY	+,+,-	XKRY,XKRY2,FAM41AY1	1913,1913,271573
chr9:70977118-70978079	chr9	+	70977157	70977766	True	NR_015423,NM_021965	chr9,chr9	-,+	LOC572558,PGM5	-4400,-5399
chr1:160309570-160310660	chr1	+	160309670	160310637	True	NM_004371,NM_015331,NM_001098398	chr1,chr1,chr1	-,+,-	COPA,NCSTN,COPA	2768,2425,2768
chr1:91357841-91358968	chr1	+	91358536	91358968	True	NM_016620,NM_001134419	chr1,chr1	-,+	ZNF644,CDC7	128112,607435
chr1:91357841-91358968	chrX	+	71895783	71895955	False	NM_001122670,NM_001080851	chrX,chrX	-,+	PHKA1,DMRTC1B	38246,168920
chr1:91357841-91358968	chrX	+	71915696	71925074	False	NM_001122670,NM_001080851	chrX,chrX	-,+	PHKA1,DMRTC1B	18333,139801
chr2:100939048-100939529	chr2	+	100939125	100939570	True	NM_198461,NM_001011717	chr2,chr2	-,+	LONRF2,NMS	66,147373
chr2:110873782-110874095	chr2	+	110873814	110874054	True	NM_005434,NR_037626	chr2,chr2	-,+	MALL,LOC100507334	139,129160
chr15:79586601-79586818	chr15	+	79586663	79586861	True	NM_001146341,NM_002891	chr15,chr15	+,-	ANKRD34C,RASGRF1	-11568,-203448
chr14:51410499-51410769	chr14	+	51410635	51410713	True	NM_181814,NM_002863,NM_001163940	chr14,chr14,chr14	+,-,-	ABHD12B,PYGL,PYGL	-71808,585,585
chr19:58609893-58611547	chr19	+	58609970	58611032	True	NM_001145543,NM_007134,NM_001145544,NM_023926	chr19,chr19,chr19,chr19	-,+,-,-	ZSCAN18,ZNF135,ZSCAN18,ZSCAN18	-240,-39414,-240,-240
chr6:3041041-3042050	chr6	+	3041149	3042063	True	NR_033884,NM_003804	chr6,chr6	-,+	LOC401233,RIPK1	-16144,34994
chr2:227663806-227664142	chr2	+	227664007	227664191	True	NM_001167608,NM_005544	chr2,chr2	+,-	RHBDD1,IRS1	36479,-501
chr19:19728891-19729449	chr19	+	19728980	19729390	True	NM_004720,NM_025245,NM_033204	chr19,chr19,chr19	-,-,+	LPAR2,PBX4,ZNF101	9699,99,50272
chr13:111837468-111838509	chr13	+	111837624	111838403	True	NM_001113513,NM_017664	chr13,chr13	+,-	ARHGEF7,ANKRD10	769,-270208
chr2:220253422-220254406	chr2	+	220253435	220254277	True	NM_012100,NM_001927	chr2,chr2	-,+	DNPEP,DES	-773,28821
chr8:43147437-43147930	chr8	+	43147541	43147811	True	NR_027669,NM_001005365,NM_001002920	chr8,chr8,chr8	-,+,+	RNF170,POTEA,POTEA	-395675,-9,-9
chr3:12836475-12837154	chr3	+	12836536	12837045	True	NM_012298,NM_001162499,NM_018306	chr3,chr3,chr3	+,+,-	CAND2,CAND2,TMEM40	1125,1125,-35728
chr22:41808545-41808779	chr22	+	41808551	41808745	True	NM_003216,NM_016272	chr22,chr22	+,-	TEF,TOB2	-30639,34332
chr5:131821546-131821999	chr5	+	131821553	131822021	True	NM_005732,NM_002198	chr5,chr5	+,-	RAD50,IRF1	70594,4494
chr7:74990448-74990726	chr7	+	74990448	74990750	True	NR_003614,NM_001002840,NM_018991	chr7,chr7,chr7	-,+,+	PMS2L2,STAG3L1,STAG3L1	-2233,-2062,-2062
chr7:74990448-74990726	chr7	+	99935606	99935666	False	NR_036570,NR_003613,NR_036569	chr7,chr7,chr7	+,-,+	PILRB,PMS2P1,PILRB	-1979,-1676,-1979
chr7:74990448-74990726	chr7	-	72474146	72474448	False	NM_001013739,NR_003614	chr7,chr7	-,+	STAG3L3,PMS2L2	2067,2231
chr7:74990448-74990726	chr7	-	74304411	74304713	False	NR_027777,NR_027776,NM_001025202,NR_027775	chr7,chr7,chr7,chr7	+,+,-,+	PMS2P5,PMS2P5,STAG3L2,PMS2P5	2180,2180,2078,2180
chr6:26422375-26423765	chr6	+	26422810	26423738	True	NR_027795,NM_003543	chr6,chr6	+,-	BTN2A3,HIST1H4H	-1242,-137083
chr1:168150743-168151018	chr1	+	168150745	168150984	True	NM_153832,NM_001031800,NM_152902	chr1,chr1,chr1	-,+,+	GPR161,TIPRL,TIPRL	-45121,-2625,-2625
chrX:151306735-151307060	chrX	+	151306863	151307031	True	NM_001204811,NM_001011550,NM_021048,NM_001011543	chrX,chrX,chrX,chrX	-,+,-,-	MAGEA10-MAGEA5,MAGEA4,MAGEA10,MAGEA10	44,-220154,44,44
chr19:14182111-14182614	chr19	+	14182202	14182641	True	NR_024282,NM_001145028	chr19,chr19	+,-	LOC113230,PALM3	1179,-12231
chr18:44496254-44496918	chr18	+	44496385	44496901	True	NM_173206,NM_004671,NM_031303	chr18,chr18,chr18	-,-,+	PIAS2,PIAS2,KATNAL2	615,615,29885
chr16:19472750-19474685	chr16	+	19472961	19474673	True	NM_024780,NM_016641	chr16,chr16	+,-	TMC5,GDE1	-5241,58827
chr4:77227025-77227335	chr4	+	77227071	77227203	True	NM_003943,NM_005506	chr4,chr4	+,-	STBD1,SCARB2	473,-92019
chr5:177591319-177592125	chr5	+	177591406	177592052	True	NM_022762,NM_017838	chr5,chr5	+,-	RMND5B,NHP2	-33429,-10445
chr10:113937435-113938559	chr10	+	113937539	113938610	True	NM_058222,NM_020918	chr10,chr10	+,-	TECTB,GPAM	104882,4972
chr12:128057321-128057560	chr12	+	128057324	128057606	True	NR_033970,NR_033987	chr12,chr12	-,+	LOC440117,FLJ37505	-698088,308555
chr9:136204465-136205233	chr9	+	136204592	136204986	True	NM_000972,NM_006753	chr9,chr9	+,-	RPL7A,SURF6	10082,-1545
chr22:41856896-41857518	chr22	+	41857264	41857392	True	NM_032758,NM_001098	chr22,chr22	-,+	PHF5A,ACO2	7366,7736
chr3:36943376-36944779	chr3	+	36943400	36944811	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	41787,90029
chr14:58715971-58716792	chr14	+	58715995	58716669	True	NM_152132,NM_002788,NR_029434	chr14,chr14,chr14	+,+,-	PSMA3,PSMA3,FLJ31306	-4459,-4459,48236
chr2:158862835-158864070	chr2	+	158863007	158864104	True	NM_001111067,NM_001135098	chr2,chr2	-,+	ACVR1,UPP2	-130633,-11375
chr12:10363092-10363401	chr12	+	10363247	10363311	True	NM_031412,NM_002543	chr12,chr12	+,-	GABARAPL1,OLR1	2177,-38457
chr12:107348773-107349274	chr12	+	107348837	107349272	True	NM_001033050,NM_152261	chr12,chr12	-,+	MTERFD3,C12orf23	31707,271
chr13:25534452-25535588	chr13	+	25534551	25535512	True	NR_026730,NM_030979	chr13,chr13	-,+	TPTE2P1,PABPC3	7145,134763
chr13:25534452-25535588	chr13	+	20006189	20006239	False	NR_034026,NR_027248	chr13,chr13	+,-	LOC100287114,ANKRD26P3	-87051,-87076
chr13:25534452-25535588	chr13	-	25161837	25162793	False	NM_006437,NR_002815	chr13,chr13	-,+	PARP4,LOC374491	-74889,-7542
chr5:150326144-150326385	chr5	+	150326184	150326389	True	NM_002084,NR_026867	chr5,chr5	+,-	GPX3,ZNF300P1	73609,-38
chr16:24737243-24738537	chr16	+	24737345	24738195	True	NM_001006634,NM_014494	chr16,chr16	-,+	ARHGAP17,TNRC6A	288533,2853
chr22:18257900-18258145	chr22	+	18257916	18258176	True	NM_001196,NM_197967,NM_197966,NM_015367	chr22,chr22,chr22,chr22	-,-,-,+	BID,BID,BID,BCL2L13	-658,-658,-1137,-136482
chr11:26351606-26352782	chr11	+	26351709	26352645	True	NM_031418,NM_001135091	chr11,chr11	+,-	ANO3,MUC15	1032,241220
chr16:33965218-33965540	chr16	+	33965304	33965544	True	NR_027080,NR_002837	chr16,chr16	+,-	LOC283914,UBE2MP1	632242,439268
chr5:34839438-34839639	chr5	+	34839449	34839687	True	NM_144725,NR_026591	chr5,chr5	+,-	TTC23L,RAD1	-231,76094
chr20:1252076-1253254	chr20	+	1252478	1253291	True	NM_014723,NM_015685	chr20,chr20	+,-	SNPH,SDCBP2	-5570,41077
chrX:100805557-100805787	chrX	+	100805607	100805784	True	NM_001009584,NM_016608	chrX,chrX	-,+	ARMCX6,ARMCX1	67258,-144
chr19:36346802-36347132	chr19	+	36346828	36346990	True	NM_199180,NM_004646,NM_032123,NM_199179	chr19,chr19,chr19,chr19	+,-,+,+	KIRREL2,NPHS1,KIRREL2,KIRREL2	819,-3933,819,819
chr17:16256923-16257575	chr17	+	16256971	16257411	True	NM_181716,NM_018955	chr17,chr17	-,+	CENPV,UBB	-159,26955
chr13:49106562-49106829	chr13	+	49106616	49106784	True	NM_001268,NM_020377	chr13,chr13	-,+	RCBTB2,CYSLTR2	582,174166
chr7:88387686-88388296	chr7	+	88387736	88388261	True	NM_152706,NM_181646	chr7,chr7	-,+	C7orf62,ZNF804B	36820,491
chr17:26667419-26667728	chr17	+	26667422	26667740	True	NM_174887,NM_021137	chr17,chr17	-,+	IFT20,TNFAIP1	-4927,-4926
chr7:99723731-99724549	chr7	+	99724405	99724593	True	NM_139315,NM_152755,NM_001190415,NR_033792,NM_203397,NM_005641	chr7,chr7,chr7,chr7,chr7,chr7	-,+,-,-,+,-	TAF6,CNPY4,TAF6,TAF6,MBLAC1,TAF6	-7384,-7191,-6924,-7410,-136,-7410
chr18:46985685-46986514	chr18	+	46985774	46986496	True	NM_017653,NR_031720	chr18,chr18	-,+	DYM,MIR1539	633,27246
chr2:223918667-223919061	chr2	+	223918730	223919096	True	NM_080671,NM_005687	chr2,chr2	+,-	KCNE4,FARSB	-1919,-397903
chr4:103682252-103683231	chr4	+	103682351	103683255	True	NM_001008388,NM_005908	chr4,chr4	+,-	CISD2,MANBA	106879,-200
chr19:58477638-58478229	chr19	+	58477710	58477964	True	NR_036508,NM_152474	chr19,chr19	+,-	LOC100128398,C19orf18	36297,7988
chrX:75001959-75003086	chrX	+	75001997	75002957	True	NM_016500,NM_138703	chrX,chrX	+,-	CXorf26,MAGEE2	389813,2180
chr5:45586669-45588347	chr5	+	45586837	45588394	True	NM_021072,NM_016640	chr5,chr5	-,+	HCN1,MRPS30	107883,-777874
chr8:126440098-126440378	chr8	+	126440208	126440426	True	NM_014846,NM_025195	chr8,chr8	-,+	KIAA0196,TRIB1	-336147,2136
chr19:48249873-48250117	chr19	+	48250054	48250152	True	NM_015710,NM_198479,NR_003048	chr19,chr19,chr19	+,-,+	GLTSCR2,TPRX1,SNORD23	-1312,56759,8957
chr1:151170048-151171045	chr1	+	151170366	151171080	True	NM_001135637,NM_001135636,NM_003557,NM_005997,NM_001135638	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	PIP5K1A,PIP5K1A,PIP5K1A,VPS72,PIP5K1A	-60,-60,-60,-7726,-60
chr4:48268777-48269982	chr4	+	48268930	48269709	True	NM_020846,NM_003215	chr4,chr4	+,-	SLAIN2,TEC	73903,2155
chr22:23922974-23923460	chr22	+	23923020	23923428	True	NM_153615,NM_152855,NM_020070	chr22,chr22,chr22	+,-,-	RGL4,IGLL1,IGLL1	109619,-525,-525
chr10:81680861-81681112	chr10	+	81680902	81681110	True	NR_002724,NM_003019	chr10,chr10	+,-	MBL1P,SFTPD	-1019,27801
chr19:46270897-46271113	chr19	+	46270968	46271104	True	NM_175875,NM_017659	chr19,chr19	-,+	SIX5,QPCTL	1443,-75278
chr16:11038760-11040157	chr16	+	11038892	11040030	True	NM_014015,NM_015226	chr16,chr16	-,+	DEXI,CLEC16A	-2635,-599
chr1:92785477-92786120	chr1	+	92785585	92785824	True	NM_053274,NM_024813	chr1,chr1	-,+	GLMN,RPAP2	-21019,-21120
chr1:24125300-24126259	chr1	+	24125369	24126306	True	NM_001008216,NM_000403,NM_007260,NM_001127621	chr1,chr1,chr1,chr1	-,-,+,-	GALE,GALE,LYPLA2,GALE	1038,778,-7774,65
chr12:64235675-64236166	chr12	+	64235678	64235950	True	NM_020762,NM_173812	chr12,chr12	+,-	SRGAP1,DPY19L2	2590,-173324
chr11:1875644-1875854	chr11	+	1875649	1875799	True	NM_002339,NR_036185	chr11,chr11	+,-	LSP1,MIR4298	-1500,5017
chr3:191260792-191262148	chr3	+	191261017	191262199	True	NM_001083308,NM_198152	chr3,chr3	+,-	PYDC2,UTS2D	-82123,-212692
chr9:126684506-126685390	chr9	+	126684520	126685367	True	NM_004789,NM_020946,NM_024820	chr9,chr9,chr9	+,-,-	LHX2,DENND1A,DENND1A	88521,7100,7100
chr11:2011380-2011807	chr11	+	2011624	2011794	True	NR_024471,NR_002196,NR_030533,NM_021134	chr11,chr11,chr11,chr11	-,-,-,+	LOC100133545,H19,MIR675,MRPL23	-474,7321,6317,-43173
chr12:98910882-98911334	chr12	+	98910995	98911287	True	NM_001032284,NM_001032283,NR_027157,NM_003276	chr12,chr12,chr12,chr12	+,+,-,+	TMPO,TMPO,LOC100128191,TMPO	-1708,-1708,-991,-1708
chr9:119385822-119387635	chr9	+	119385936	119387418	True	NM_198186,NM_001099679	chr9,chr9	-,+	ASTN2,TRIM32	62126,62162
chr22:18559547-18560324	chr22	+	18559550	18560350	True	NM_001127649,NM_017929,NM_001199319,NM_001136004	chr22,chr22,chr22,chr22	+,+,+,-	PEX26,PEX26,PEX26,MICAL3	409,335,335,-52225
chr20:279431-280299	chr20	+	279457	280191	True	NM_033089,NM_153269	chr20,chr20	+,-	ZCCHC3,C20orf96	-1304,-8067
chr3:132756641-132757085	chr3	+	132756680	132756961	True	NM_153240,NM_023943,NM_001136469	chr3,chr3,chr3	-,+,+	NPHP3,TMEM108,TMEM108	-315377,209,209
chr19:48052308-48052928	chr19	+	48052370	48052880	True	NM_015711,NM_001101419	chr19,chr19	+,-	GLTSCR1,ZNF541	58572,6283
chr1:38060301-38060704	chr1	+	38060450	38060596	True	NM_013285,NM_003462	chr1,chr1	-,+	GNL2,DNALI1	1040,-37982
chr10:118426592-118427595	chr10	+	118426964	118427638	True	NM_005396,NM_144661	chr10,chr10	+,-	PNLIPRP2,C10orf82	-46551,1893
chr4:17783689-17784396	chr4	+	17783751	17784304	True	NM_015688,NM_022346	chr4,chr4	-,+	FAM184B,NCAPG	-616,28220
chr19:36485480-36485987	chr19	+	36485844	36486034	True	NM_001039876,NM_001042631	chr19,chr19	-,+	C19orf46,SDHAF1	13688,55
chr2:10096507-10098396	chr2	+	10096782	10098292	True	NM_001037160,NM_198182	chr2,chr2	-,+	CYS1,GRHL1	122303,-5047
chr20:62496035-62496289	chr20	+	62496203	62496281	True	NM_080622,NM_025224,NM_199359,NM_003288,NM_199363,NM_199362,NM_199361,NM_199360	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,-,+,+,+,+,+,+	ABHD16B,ZBTB46,TPD52L2,TPD52L2,TPD52L2,TPD52L2,TPD52L2,TPD52L2	-3688,-59347,308,308,308,308,308,308
chr22:32596936-32598018	chr22	+	32596959	32597633	True	NM_006605,NR_033411,NM_001098527,NM_001159546,NM_001159545	chr22,chr22,chr22,chr22,chr22	-,+,-,-,-	RFPL2,SLC5A1,RFPL2,RFPL2,RFPL2	-7493,-141853,1881,954,3135
chr17:37852646-37853066	chr17	+	37852720	37853086	True	NM_033419,NM_001005862,NM_004448	chr17,chr17,chr17	-,+,+	PGAP3,ERBB2,ERBB2	-8410,-8378,3167
chr6:123904927-123905329	chr6	+	123905245	123905305	True	NM_001040214,NM_006073	chr6,chr6	+,-	NKAIN2,TRDN	219763,52687
chr19:11687751-11687994	chr19	+	11687852	11687984	True	NM_001611,NM_145295,NM_001111036,NM_001111035,NM_001111034	chr19,chr19,chr19,chr19,chr19	-,+,-,-,-	ACP5,ZNF627,ACP5,ACP5,ACP5	619,20250,1867,1867,1658
chr2:185543338-185544197	chr2	+	185543395	185544052	True	NM_194250,NM_205842	chr2,chr2	+,-	ZNF804A,NCKAP1	-80360,-1640166
chr6:27528019-27528683	chr6	+	27528143	27528727	True	NM_001076781,NM_007149	chr6,chr6	+,-	ZNF391,ZNF184	-171683,-87246
chr12:133464915-133465798	chr12	+	133465205	133465563	True	NM_018223,NM_019591,NM_001161346,NM_001161347,NM_001161344,NM_001161345	chr12,chr12,chr12,chr12,chr12,chr12	-,+,-,-,-,-	CHFR,ZNF26,CHFR,CHFR,CHFR,CHFR	-1001,97492,-1001,-1001,-1001,-1001
chr2:100939529-100940223	chr2	+	100939563	100940260	True	NM_198461,NM_001011717	chr2,chr2	-,+	LONRF2,NMS	-368,146683
chr16:3705154-3706335	chr16	+	3705196	3706290	True	NM_005223,NM_032444	chr16,chr16	+,-	DNASE1,SLX4	-2307,-43611
chr1:149191211-149192458	chr1	+	149191684	149192486	True	NM_001024599,NR_027002	chr1,chr1	-,+	HIST2H2BF,LOC388692	206793,86989
chr1:207142627-207143868	chr1	+	207142710	207143891	True	NM_001122979,NM_006850,NM_032029,NM_001170631	chr1,chr1,chr1,chr1	-,+,-,-	FCAMR,IL24,FCAMR,FCAMR	129,-71973,129,129
chrX:152906927-152907166	chrX	+	152907009	152907215	True	NM_001395,NM_001135740	chrX,chrX	+,-	DUSP9,PNCK	681,31578
chr4:187476774-187477664	chr4	+	187477031	187477350	True	NM_000128,NM_005958	chr4,chr4	+,-	F11,MTNR1A	-289964,-494
chr3:52003537-52004023	chr3	+	52003586	52004004	True	NM_001174100,NR_027476,NM_033010,NM_001146314,NM_015407,NR_037192,NM_033008,NM_032750,NM_020418	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,+,+,-,-,-	PCBP4,ABHD14B,PCBP4,ABHD14B,ABHD14A,ABHD14A-ACY1,PCBP4,ABHD14B,PCBP4	-2104,4692,-6678,4692,5037,5037,-2104,4692,-2136
chr1:161715263-161715658	chr1	+	161715367	161715551	True	NM_007240,NR_002595	chr1,chr1	+,-	DUSP12,RPL31P11	4029,-60325
chr22:25422188-25422588	chr22	+	25422209	25422389	True	NM_001001663,NM_001145206	chr22,chr22	-,+	TMEM211,KIAA1671	-86895,1551
chr2:54372788-54373705	chr2	+	54372946	54373578	True	NM_001003937,NM_138448	chr2,chr2	-,+	TSPYL6,ACYP2	109887,-30588
chr18:21270543-21270780	chr18	+	21270547	21270615	True	NM_001127717,NM_173505,NM_198129	chr18,chr18,chr18	+,-,+	LAMA3,ANKRD29,LAMA3	-1036,-27698,-1036
chr16:29973613-29973861	chr16	+	29973628	29973894	True	NM_001083613,NM_003609,NM_194280	chr16,chr16,chr16	+,-,+	TMEM219,HIRIP3,TMEM219	-328,33568,-328
chr1:211523597-211524165	chr1	+	211523686	211524196	True	NM_001164688,NM_145759	chr1,chr1	-,+	RD3,TRAF5	142113,-4031
chr15:41060774-41061216	chr15	+	41060799	41061139	True	NM_018145,NM_001130448,NM_005258	chr15,chr15,chr15	-,+,+	FAM82A2,C15orf62,GCHFR	-13341,1019,-4565
chr11:64361328-64361815	chr11	+	64361406	64361864	True	NM_153378,NM_144585,NM_138734	chr11,chr11,chr11	+,+,-	SLC22A12,SLC22A12,NRXN2	-3175,-3175,48973
chr1:1385169-1385428	chr1	+	1385212	1385428	True	NR_026871,NM_001039211	chr1,chr1	-,+	LOC441869,ATAD3C	-28562,-194
chr9:4999118-5000706	chr9	+	4999142	5000723	True	NM_007179,NM_004972	chr9,chr9	-,+	INSL6,JAK2	184946,-13949
chr16:30539797-30541443	chr16	+	30540015	30541092	True	NM_023931,NM_024671,NM_002209	chr16,chr16,chr16	-,-,+	ZNF747,ZNF768,ITGAL	5153,-2105,-56083
chr6:134280435-134281916	chr6	+	134280506	134281955	True	NM_004865,NM_145176	chr6,chr6	+,-	TBPL1,SLC2A12	-6265,91884
chr8:144799892-144800224	chr8	+	144799899	144800253	True	NM_001162914,NM_139021	chr8,chr8	-,+	LOC100130274,MAPK15	-9620,-1445
chr19:48898550-48899065	chr19	+	48898679	48899091	True	NM_000836,NM_006801	chr19,chr19	+,-	GRIN2D,KDELR1	-598,-3869
chr16:4527640-4528472	chr16	+	4527947	4528427	True	NM_002134,NM_001127206,NM_001127204,NM_020677	chr16,chr16,chr16,chr16	+,+,+,-	HMOX2,HMOX2,HMOX2,NMRAL1	-1667,-3289,-1667,-3051
chrX:125606468-125606686	chr5	+	79947771	79947821	True	NM_001190470,NM_002439,NM_000791	chr5,chr5,chr5	-,+,-	MTRNR2L2,MSH3,DHFR	-917,2472,3029
chr22:17077671-17077891	chr22	+	17077678	17077748	True	NM_014406,NR_001591	chr22,chr22	-,+	CCT8L2,psiTPTE22	-3978,5052
chr12:7176808-7177421	chr12	+	7176874	7177386	True	NM_001734,NM_201442,NM_005768	chr12,chr12,chr12	+,+,-	C1S,C1S,LPCAT3	-8945,-8945,-51032
chr15:99789748-99791068	chr15	+	99789809	99791109	True	NM_001040658,NM_001040659,NM_001040656,NM_001040657,NM_001040660,NM_144598,NM_022905,NM_001040655	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,-,-,-,+,-,-	TTC23,TTC23,TTC23,TTC23,TTC23,LRRC28,TTC23,TTC23	6,6,6,6,6,542,6,6
chr8:114373095-114374591	chr8	+	114373099	114374376	True	NR_031745,NM_198124	chr8,chr8	+,-	MIR2053,CSMD3	-717438,15066
chr17:80054362-80054827	chr17	+	80054530	80054812	True	NM_004104,NM_212492	chr17,chr17	-,+	FASN,GPS1	1344,-44818
chr3:135100112-135100450	chr3	+	135100112	135100326	True	NM_178554,NM_001190447	chr3,chr3	-,+	KY,PPP2R3A	-730248,584188
chr3:58480319-58481551	chr3	+	58480367	58481567	True	NM_153331,NM_003500,NM_001128214	chr3,chr3,chr3	+,-,+	KCTD6,ACOX2,KCTD6	2524,41417,-2607
chr21:37692465-37692666	chr21	+	37692469	37692579	True	NM_012130,NM_015358	chr21,chr21	-,+	CLDN14,MORC3	146196,-33
chr7:158655626-158656289	chr7	+	158656166	158656242	True	NM_020728,NM_018051	chr7,chr7	-,+	ESYT2,WDR60	-33847,-6948
chr5:54527327-54527625	chr5	+	54527332	54527634	True	NM_021147,NM_001190787,NM_001008397	chr5,chr5,chr5	-,-,+	CCNO,LOC345643,GPX8	1924,-4189,-71399
chr17:73283591-73283900	chr17	+	73283631	73283759	True	NM_021734,NM_001126122,NM_001126121,NR_036520	chr17,chr17,chr17,chr17	-,-,-,+	SLC25A19,SLC25A19,SLC25A19,LOC100287042	1821,1821,1821,-16309
chr4:109524909-109526002	chr4	+	109525011	109526011	True	NR_026968,NM_000995	chr4,chr4	-,+	LOC285456,RPL34	15663,15710
chr1:145549310-145549574	chr1	+	145549397	145549501	True	NM_144698,NR_002328	chr1,chr1	+,-	ANKRD35,GNRHR2	-239,-33321
chr15:100169999-100170784	chr15	+	100170290	100170811	True	NM_001130928,NM_152449	chr15,chr15	+,-	MEF2A,LYSMD4	2371,102867
chr19:57050515-57051252	chr19	+	57050747	57051221	True	NR_030740,NM_020828	chr19,chr19	-,+	ZNF667,ZFP28	-61977,-481
chr4:10459325-10459769	chr4	+	10459469	10459807	True	NM_000798,NM_053042	chr4,chr4	+,-	DRD5,ZNF518B	-676262,-437
chr12:52443718-52444038	chr12	+	52443770	52444066	True	NM_002135,NM_173157,NM_001081492	chr12,chr12,chr12	+,+,-	NR4A1,NR4A1,KRT80	1119,1119,141768
chr1:150336363-150337182	chr1	+	150336410	150336939	True	NM_016022,NM_015203	chr1,chr1	-,+	APH1A,RPRD2	-94878,50
chr19:17570058-17570731	chr19	+	17570057	17570780	True	NM_198580,NM_138454	chr19,chr19	+,-	SLC27A1,NXNL1	10519,995
chr4:174314011-174315649	chr4	+	174314420	174315344	True	NM_007281,NM_003864	chr4,chr4	-,+	SCRG1,SAP30	5329,-22385
chrX:49087569-49088322	chrX	+	49087706	49088182	True	NM_005183,NM_014008	chrX,chrX	-,+	CACNA1F,CCDC22	1701,3744
chr11:69488169-69488715	chr11	+	69488216	69488452	True	NM_053056,NM_153451	chr11,chr11	+,-	CCND1,ORAOV1	-32394,1763
chr16:85622184-85622389	chr16	+	85622192	85622358	True	NM_001134473,NM_016095	chr16,chr16	+,-	KIAA0182,GINS2	22670,100280
chr15:27018883-27019391	chr15	+	27019057	27019389	True	NM_000814,NM_000810,NM_021912	chr15,chr15,chr15	-,+,-	GABRB3,GABRA5,GABRB3	-834,92476,-122
chr2:25474512-25474786	chr2	+	25474558	25474746	True	NM_153759,NM_014971	chr2,chr2	-,+	DNMT3A,EFR3B	484,-209636
chr8:130951393-130951645	chr8	+	130951435	130951561	True	NM_016623,NR_031613	chr8,chr8	-,+	FAM49B,MIR1208	489,-1789124
chr19:44029715-44029944	chr19	+	44029734	44029988	True	NM_014297,NM_174945	chr19,chr19	-,+	ETHE1,ZNF575	1458,7351
chr4:102267591-102267962	chr4	+	102267749	102267961	True	NM_001130692,NM_000944,NM_001130691,NR_033874	chr4,chr4,chr4,chr4	-,-,-,+	PPP3CA,PPP3CA,PPP3CA,FLJ20021	717,717,717,972
chr11:1688619-1688947	chr11	+	1688663	1688897	True	NR_026642,NR_026643	chr11,chr11	-,+	FAM99B,FAM99A	18012,-1885
chr10:92680454-92680860	chr10	+	92680470	92680832	True	NM_001104546,NM_014391	chr10,chr10	+,-	RPP30,ANKRD1	-48821,250
chr6:3260082-3260680	chr6	+	3260117	3260508	True	NM_178012,NM_001135750,NM_001128591,NM_001128592	chr6,chr6,chr6,chr6	-,+,+,+	TUBB2B,PSMG4,PSMG4,PSMG4	-32149,-1006,-1006,-1006
chr2:74669431-74669928	chr2	+	74669437	74669738	True	NM_033046,NM_001015056,NM_031288,NM_001015055	chr2,chr2,chr2,chr2	-,-,+,-	RTKN,RTKN,INO80B,RTKN	-1727,-1727,12411,-377
chr22:30794803-30795225	chr22	+	30794900	30795218	True	NM_033382,NM_001204204,NM_001017981,NM_012429	chr22,chr22,chr22,chr22	+,+,-,+	SEC14L2,SEC14L2,RNF215,SEC14L2	-2022,-2022,-11598,-2022
chr2:198052724-198053568	chr2	+	198052772	198053543	True	NM_001195144,NM_025147	chr2,chr2	-,+	ANKRD44,COQ10B	122037,264687
chr11:96065873-96066118	chr11	+	96066045	96066161	True	NR_036125,NM_032427	chr11,chr11	+,-	MIR1260B,MAML2	8440,10233
chr22:39635185-39635396	chr22	+	39635267	39635353	True	NM_145731,NM_002608,NM_033016	chr22,chr22,chr22	+,-,-	SYNGR1,PDGFB,PDGFB	110600,5654,1611
chr21:33651065-33651823	chr21	+	33651288	33651790	True	NM_178817,NM_018944	chr21,chr21	+,-	MRAP,MIS18A	12333,88
chr13:95954315-95954737	chr13	+	95954319	95954601	True	NM_001105515,NM_005845,NM_001160100	chr13,chr13,chr13	-,-,+	ABCC4,ABCC4,CLDN10	-632,-632,131251
chr5:134724946-134725634	chr5	+	134725001	134725564	True	NM_138609,NM_138610,NM_001040158,NM_178019	chr5,chr5,chr5,chr5	-,-,-,+	H2AFY,H2AFY,H2AFY,CATSPER3	9415,9415,9415,-421471
chr19:8514712-8515772	chr19	+	8514730	8515276	True	NM_032152,NM_005968,NM_031203	chr19,chr19,chr19	-,+,+	PRAM1,HNRNPM,HNRNPM	52312,-4978,-4978
chr19:53662615-53664291	chr19	+	53662697	53664046	True	NM_032584,NM_173856,NM_001172674,NM_001172675	chr19,chr19,chr19,chr19	-,+,-,-	ZNF347,VN1R2,ZNF347,ZNF347	-375,97498,-384,-375
chr15:40396395-40397091	chr15	+	40396408	40396897	True	NM_001003943,NM_001003942,NM_001003940,NM_001211,NM_033503	chr15,chr15,chr15,chr15,chr15	-,-,-,+,-	BMF,BMF,BMF,BUB1B,BMF	1441,1441,4229,56312,1793
chr1:179263263-179263757	chr1	+	179263276	179263483	True	NM_001136001,NM_003101	chr1,chr1	-,+	ABL2,SOAT1	-64457,-310
chr22:42335126-42335409	chr22	+	42335143	42335449	True	NM_024053,NM_001002876,NM_001110215,NR_024355	chr22,chr22,chr22,chr22	-,-,-,+	CENPM,CENPM,CENPM,LOC339674	7749,7749,824,12741
chr11:85750968-85751852	chr11	+	85751126	85751866	True	NM_001008660,NM_173556	chr11,chr11	-,+	PICALM,CCDC83	28292,-185042
chr8:67340487-67340800	chr8	+	67340549	67340765	True	NM_001080416,NM_015169,NM_144650	chr8,chr8,chr8	-,+,+	MYBL1,RRS1,ADHFE1	184769,497,3952
chr16:31097713-31098611	chr16	+	31097715	31098659	True	NM_024006,NM_001039503,NM_014699,NM_206824	chr16,chr16,chr16,chr16	-,-,+,-	VKORC1,PRSS53,ZNF646,VKORC1	7667,1521,-12023,7667
chr20:57620898-57622472	chr20	+	57621231	57622044	True	NR_037930,NM_016045,NR_037929,NM_030773	chr20,chr20,chr20,chr20	-,-,-,+	SLMO2-ATP5E,SLMO2,SLMO2-ATP5E,TUBB1	-3330,-3330,-3330,-26981
chr19:15852906-15853722	chr19	+	15852979	15853564	True	NM_013938,NR_033864	chr19,chr19	+,-	OR10H3,CYP4F24P	-827,37297
chr2:139259978-139260212	chr2	+	139260100	139260250	True	NM_001001664,NM_007226	chr2,chr2	+,-	SPOPL,NXPH2	-801,277611
chr5:159798213-159799578	chr5	+	159798471	159799593	True	NM_031908,NM_004219	chr5,chr5	-,+	C1QTNF2,PTTG1	-823,49271
chr1:47333315-47333551	chr1	+	47333471	47333563	True	NM_001099772,NR_002788	chr1,chr1	+,-	CYP4B1,CYP4Z2P	-68861,32634
chr19:50013697-50013972	chr19	+	50013783	50013853	True	NM_004107,NM_001136019,NR_029703	chr19,chr19,chr19	+,+,-	FCGRT,FCGRT,MIR150	2582,1682,-9658
chr1:161144644-161144869	chr1	+	161144653	161144829	True	NM_000309,NM_001199874,NM_001199873,NM_003779,NM_001122764	chr1,chr1,chr1,chr1,chr1	+,-,-,-,+	PPOX,B4GALT3,B4GALT3,B4GALT3,PPOX	-8531,2979,2979,2979,-8531
chr7:100079756-100080416	chr7	+	100079756	100080465	True	NM_173564,NM_030935	chr7,chr7	+,-	C7orf51,TSC22D4	1084,-2854
chr18:9616565-9618376	chr18	+	9616581	9618084	True	NM_006868,NM_005134,NM_001042388	chr18,chr18,chr18	+,-,-	RAB31,PPP4R1,PPP4R1	90143,-1981,-1981
chr9:117611-117812	chr9	+	117682	117746	True	NM_203447,NM_207305	chr9,chr9	+,-	DOCK8,FOXD4	97118,721
chrX:23922782-23923479	chrX	+	23922938	23923232	True	NM_024122,NM_001169574,NR_026545,NM_152761	chrX,chrX,chrX,chrX	-,+,-,+	APOO,CXorf58,APOO,CXorf58	2875,2890,2875,2890
chr7:149325060-149325937	chr7	+	149325070	149325530	True	NM_032534,NR_027788,NR_027789	chr7,chr7,chr7	+,-,-	KRBA1,ZNF767,ZNF767	86617,-3189,-3189
chr2:226312756-226314483	chr2	+	226312803	226314207	True	NM_014689,NM_020864	chr2,chr2	-,+	DOCK10,KIAA1486	-405473,-47252
chr12:7862132-7864011	chr12	+	7862758	7864053	True	NM_199286,NM_020634	chr12,chr12	+,-	DPPA3,GDF3	35,-14398
chr14:88886597-88888014	chr14	+	88886677	88887943	True	NM_021161,NM_018418	chr14,chr14	-,+	KCNK10,SPATA7	-93421,-34740
chr2:95826670-95827798	chr2	+	95826957	95827667	True	NM_021088,NM_032788,NM_001017396	chr2,chr2,chr2	+,-,+	ZNF2,ZNF514,ZNF2	3515,-1694,3515
chr5:140260959-140262044	chr5	+	140261341	140261846	True	NM_031865,NM_031864,NM_002109,NM_018903,NM_018904	chr5,chr5,chr5,chr5,chr5	+,+,-,+,+	PCDHA13,PCDHA12,HARS,PCDHA12,PCDHA13	7,-6468,-190370,-6468,7
chr4:100134277-100134890	chr4	+	100134344	100134920	True	NM_000672,NM_001102470,NR_037884	chr4,chr4,chr4	-,-,+	ADH6,ADH6,LOC100507053	5533,5533,-124398
chr10:17490916-17492317	chr10	+	17491428	17492360	True	NM_001004470,NR_034129	chr10,chr10	-,+	ST8SIA6,LOC100128098	3944,-62545
chr13:25948529-25949367	chr13	+	25948625	25949381	True	NM_004685,NM_016529	chr13,chr13	-,+	MTMR6,ATP8A2	-86921,-2467
chr19:10983032-10983256	chr19	+	10983095	10983301	True	NM_199141,NM_006858	chr19,chr19	+,-	CARM1,TMED1	-893,-36112
chr18:56288451-56288662	chr18	+	56288450	56288516	True	NM_006785,NM_052947	chr18,chr18	+,-	MALT1,ALPK2	50101,7729
chr7:47693648-47693869	chr7	+	47693690	47693881	True	NM_022748,NM_001123065	chr7,chr7	-,+	TNS3,C7orf65	-71948,960
chr19:11037844-11038358	chr19	+	11038143	11038371	True	NM_024029,NM_138358	chr19,chr19	-,+	YIPF2,C19orf52	1036,1052
chrX:85415607-85415833	chrX	+	85415616	85415882	True	NM_053281,NM_001145414	chrX,chrX	+,-	DACH2,CHM	-12212,-113050
chr2:96969043-96969482	chr2	+	96969045	96969257	True	NM_014014,NM_001008949	chr2,chr2	-,+	SNRNP200,ITPRIPL1	2102,21804
chr2:27650480-27651067	chr2	+	27650511	27651106	True	NM_177983,NM_013392	chr2,chr2	-,+	PPM1G,NRBP1	-18015,366
chr16:68300085-68300341	chr16	+	68300214	68300332	True	NM_003983,NM_001076785,NM_024939	chr16,chr16,chr16	+,+,-	SLC7A6,SLC7A6,ESRP2	-1842,-1842,-30078
chr12:132435205-132435425	chr12	+	132435245	132435324	True	NM_015409,NM_175066	chr12,chr12	+,-	EP400,DDX51	-788,193611
chrY:6778614-6778849	chrY	+	6778624	6778858	True	NM_001143,NM_134259,NM_134258,NM_033284	chrY,chrY,chrY,chrY	-,+,+,+	AMELY,TBL1Y,TBL1Y,TBL1Y	-36556,52,52,52
chr12:58238645-58238918	chr12	+	58238699	58238945	True	NM_005730,NM_001172697	chr12,chr12	-,+	CTDSP2,TSFM	1852,-62222
chr12:48353440-48354194	chr12	+	48353848	48354063	True	NM_001143841,NM_001844,NM_001143843,NM_001143842,NM_024056	chr12,chr12,chr12,chr12,chr12	+,-,+,+,+	TMEM106C,COL2A1,TMEM106C,TMEM106C,TMEM106C	3266,44275,3266,3266,3266
chr22:29456728-29457213	chr22	+	29456754	29457256	True	NM_001039570,NM_015370	chr22,chr22	+,-	KREMEN1,C22orf31	11809,701
chr1:150570159-150571147	chr1	+	150570828	150571018	True	NM_182763,NR_036211	chr1,chr1	-,+	MCL1,MIR4257	-18614,-46478
chr12:131436846-131437244	chr12	+	131436882	131437208	True	NM_194356,NM_198827	chr12,chr12	-,+	STX2,GPR133	-113071,1243
chr2:208031823-208033313	chr2	+	208031904	208033175	True	NM_003709,NM_173077	chr2,chr2	-,+	KLF7,CPO	-1290,-227677
chr19:14608101-14608656	chr19	+	14608109	14608655	True	NM_001146693,NM_202494,NM_202468,NM_005716,NM_202469,NM_202467,NM_202470	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,-,-,-,-,-	LOC100130932,GIPC1,GIPC1,GIPC1,GIPC1,GIPC1,GIPC1	-8402,-1165,-1165,-1165,-1165,-1165,-1165
chr1:115883082-115884045	chr1	+	115883199	115884063	True	NM_002506,NM_001172411	chr1,chr1	-,+	NGF,VANGL1	-2342,300510
chr2:9566572-9568419	chr2	+	9566572	9567995	True	NM_016207,NM_004763,NM_022334	chr2,chr2,chr2	+,-,-	CPSF3,ITGB1BP1,ITGB1BP1	-2755,-2929,-2929
chr14:55368969-55369275	chr14	+	55369029	55369205	True	NM_001024070,NM_001024071,NM_001024024,NM_000161,NM_080867	chr14,chr14,chr14,chr14,chr14	-,-,-,-,+	GCH1,GCH1,GCH1,GCH1,SOCS4	387,387,387,387,124638
chrX:53485824-53486469	chrX	+	53485895	53486143	True	NM_001031745,NM_004493	chrX,chrX	+,-	RIBC1,HSD17B10	-36056,-24572
chr20:33678959-33680273	chr20	+	33679141	33680109	True	NM_006404,NM_015638,NM_199368	chr20,chr20,chr20	+,-,-	PROCR,TRPC4AP,TRPC4AP	79664,559,559
chr9:46117130-46117336	chr9	+	46117139	46117385	True	NM_001145196,NR_024060	chr9,chr9	-,+	FAM75A6,FAM27A	-2486409,-390161
chr9:46117130-46117336	chr9	-	46386998	46387176	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2756268,300389
chr3:127785424-127785721	chr3	+	127785542	127785770	True	NM_013336,NM_003707	chr3,chr3	+,-	SEC61A1,RUVBL1	-14383,56951
chr3:68142367-68143552	chr3	+	68142463	68143573	True	NM_213609,NM_003848	chr3,chr3	+,-	FAM19A1,SUCLG2	-89060,-437425
chr10:6354097-6354710	chr10	+	6354177	6354749	True	NM_004566,NM_000417	chr10,chr10	+,-	PFKFB3,IL2RA	-109389,-249844
chr4:26487540-26487980	chr4	+	26487574	26487970	True	NM_000730,NM_018317	chr4,chr4	-,+	CCKAR,TBC1D19	4122,97575
chr21:35443572-35444104	chr21	+	35443815	35444085	True	NM_032476,NM_006933,NM_001697	chr21,chr21,chr21	+,+,-	MRPS6,SLC5A3,ATP5O	1737,1784,-155657
chr12:121075360-121077153	chr12	+	121075799	121077044	True	NM_001033677,NM_198202	chr12,chr12	+,-	CABP1,POP5	1377,-56598
chr1:47881402-47881895	chr1	+	47881427	47881663	True	NR_026878,NM_012186	chr1,chr1	-,+	MGC12982,FOXE3	18700,80
chr4:8269561-8269849	chr4	+	8269637	8269849	True	NM_053044,NM_001130088	chr4,chr4	+,-	HTRA3,ABLIM2	1639,-109078
chr3:128919398-128920128	chr3	+	128919454	128920172	True	NM_003418,NM_016128	chr3,chr3	-,+	CNBP,COPG	-16644,48280
chr22:44393575-44394729	chr22	+	44393581	44394700	True	NM_001003828,NM_138814	chr22,chr22	+,-	PARVB,PNPLA5	472,-105688
chr5:76507162-76507721	chr5	+	76507183	76507749	True	NM_003719,NM_032367,NM_001029854,NM_001029851,NM_001029853,NM_001029852	chr5,chr5,chr5,chr5,chr5,chr5	+,-,+,+,+,+	PDE8B,ZBED3,PDE8B,PDE8B,PDE8B,PDE8B	-528,-124153,-528,-528,-528,-528
chr11:60682223-60682584	chr11	+	60682346	60682518	True	NM_014502,NM_017870,NM_024092,NM_178031	chr11,chr11,chr11,chr11	-,+,+,+	PRPF19,TMEM132A,TMEM109,TMEM132A	-8285,9394,-1026,9394
chr5:178052070-178053439	chr5	+	178052069	178053362	True	NM_020666,NM_058230	chr5,chr5	-,+	CLK4,ZNF354B	742,233591
chr1:166964028-166964635	chr1	+	166964283	166964478	True	NM_199351,NM_032858	chr1,chr1	-,+	ILDR2,MAEL	-19722,-5823
chr17:8096534-8097486	chr17	+	8096796	8097347	True	NM_017622,NR_037447	chr17,chr17	-,+	C17orf59,MIR3676	-3232,-6355
chr1:200719036-200719843	chr1	+	200719058	200719706	True	NM_203459,NM_001031725	chr1,chr1	+,-	CAMSAP1L1,DDX59	-10423,-79932
chr6:119215474-119215707	chr6	+	119215575	119215685	True	NM_017696,NM_014034	chr6,chr6	-,+	MCM9,ASF1A	37268,-385
chr14:25518455-25518888	chr14	+	25518468	25518812	True	NM_015299,NM_014178	chr14,chr14	+,-	KHNYN,STXBP6	-619378,333
chr3:8695285-8695554	chr3	+	8695452	8695570	True	NM_033337,NM_015931	chr3,chr3	+,-	CAV3,C3orf32	79915,-1715
chr1:53607563-53608001	chr1	+	53607593	53608027	True	NM_000098,NM_006671	chr1,chr1	+,-	CPT2,SLC1A7	54073,312
chr1:92954084-92955250	chr1	+	92954229	92955155	True	NM_001127216,NM_001127215,NM_024813,NM_005263	chr1,chr1,chr1,chr1	-,-,+,-	GFI1,GFI1,RPAP2,GFI1	-2601,-4873,-189765,-1796
chr1:211554819-211555465	chr1	+	211554910	211555505	True	NM_001164688,NR_026761	chr1,chr1	-,+	RD3,C1orf97	110805,591
chr1:205093600-205094843	chr1	+	205093604	205094891	True	NM_001193273,NM_001193272,NM_005076,NM_005057	chr1,chr1,chr1,chr1	-,-,+,-	RBBP5,RBBP5,CNTN2,RBBP5	-2454,-2454,-81315,-2454
chr14:21063689-21064322	chr14	+	21063854	21064134	True	NM_001024822,NM_145250,NM_001012975	chr14,chr14,chr14	-,-,+	RNASE12,RNASE11,RNASE10	-4872,-5437,-85283
chrX:144903139-144903659	chrX	+	144903202	144903658	True	NM_004709,NM_032539,NM_001144010,NM_001144003,NM_001144004,NM_001144005,NM_001144006,NR_030589,NM_001144008,NM_001144009	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,+,+,-,+,+	CXorf1,SLITRK2,SLITRK2,SLITRK2,SLITRK2,SLITRK2,SLITRK2,MIR890,SLITRK2,SLITRK2	5269,-3906,-387,-3906,-3906,-3906,-387,172261,-387,-387
chr10:13390518-13390739	chr10	+	13390589	13390787	True	NM_001195604,NM_012247,NM_001195602,NM_182751	chr10,chr10,chr10,chr10	-,-,-,+	SEPHS1,SEPHS1,SEPHS1,MCM10	-291,-291,-291,-187086
chr16:8960901-8961511	chr16	+	8960998	8961538	True	NM_014316,NM_001042476,NM_000303	chr16,chr16,chr16	-,-,+	CARHSP1,CARHSP1,PMM2	1375,760,-69379
chr11:20691133-20691353	chr11	+	20691256	20691362	True	NM_201551,NM_006157,NM_001029865	chr11,chr11,chr11	+,+,-	NELL1,NELL1,DBX1	-190,-190,-509386
chr7:74491468-74491824	chr7	+	74491607	74491817	True	NM_030798,NM_001003795	chr7,chr7	-,+	WBSCR16,GTF2IRD2B	-1908,16529
chr7:74491468-74491824	chr7	-	74284413	74284623	False	NM_173537,NR_027775	chr7,chr7	-,+	GTF2IRD2,PMS2P5	-16572,22270
chr19:41494766-41496456	chr19	+	41495170	41496251	True	NM_030589,NM_000767	chr19,chr19	-,+	CYP2A7,CYP2B6	-106513,952
chr8:22020616-22021480	chr8	+	22020667	22021397	True	NM_139278,NM_001199,NM_001172357,NR_033403,NR_033404,NM_001172410,NM_006129,NM_003018	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,+,+,+,+,+,+,+	LGI3,BMP1,SFTPC,BMP1,BMP1,SFTPC,BMP1,SFTPC	-6323,1255,-1534,1255,1255,-1534,1255,-1534
chr6:35772178-35772752	chr6	+	35772305	35772767	True	NM_001832,NM_182548	chr6,chr6	-,+	CLPS,LHFPL5	-7203,303
chr9:130640581-130640833	chr9	+	130640617	130640809	True	NM_000476,NM_001018078	chr9,chr9	-,+	AK1,FPGS	-595,-75161
chr14:21492542-21492882	chr14	+	21492647	21492929	True	NM_201536,NM_201537,NM_201535,NM_173846,NM_201538,NM_016250,NM_201539,NM_201541,NM_201540	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	-,-,-,+,-,-,-,-,-	NDRG2,NDRG2,NDRG2,TPPP2,NDRG2,NDRG2,NDRG2,NDRG2,NDRG2	1056,1056,1056,5415,385,1056,385,385,385
chr8:145013218-145013651	chr8	+	145013231	145013687	True	NM_000837,NR_030383,NM_201384,NM_201381,NM_201383,NM_201382	chr8,chr8,chr8,chr8,chr8,chr8	+,-,-,-,-,-	GRINA,MIR661,PLEC,PLEC,PLEC,PLEC	50538,5810,121,5268,3055,4473
chr17:72733777-72734066	chr17	+	72733891	72734113	True	NM_001163989,NM_001163990,NM_001006638,NM_139018	chr17,chr17,chr17,chr17	+,+,+,-	RAB37,RAB37,RAB37,CD300LF	-983,-586,-586,-24783
chr18:12883116-12883324	chr18	+	12883189	12883339	True	NM_001013437,NM_080423,NM_080422,NM_002828	chr18,chr18,chr18,chr18	+,-,-,-	SEH1L,PTPN2,PTPN2,PTPN2	64643,1045,1045,1045
chr22:32547783-32548176	chr22	+	32547783	32548091	True	NM_001010859,NR_033411	chr22,chr22	-,+	C22orf42,SLC5A1	7202,-92677
chrX:47232677-47233190	chrX	+	47232676	47233029	True	NM_003446,NM_007130	chrX,chrX	+,-	ZNF157,ZNF41	-2728,109373
chr2:239105327-239105964	chr2	+	239105330	239105980	True	NM_030768,NR_026923	chr2,chr2	-,+	ILKAP,LOC643387	6394,34346
chr2:54014489-54015316	chr2	+	54014540	54015257	True	NM_001127398,NM_145863,NM_016115,NM_001127397,NM_015701,NM_001201965	chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,+,+,-	ERLEC1,ASB3,ASB3,ERLEC1,ERLEC1,ASB3	-523,-394,-394,-523,-523,-555
chr17:76377085-76377485	chr17	+	76377301	76377513	True	NM_003955,NM_024419	chr17,chr17	-,+	SOCS3,PGS1	-21143,-2624
chr17:67310601-67311645	chr17	+	67310654	67311654	True	NM_018672,NM_002758	chr17,chr17	-,+	ABCA5,MAP2K6	171,99183
chr7:138796616-138797282	chr7	+	138797022	138797280	True	NM_024625,NM_001144920,NM_020119	chr7,chr7,chr7	-,+,-	ZC3HAV1,TTC26,ZC3HAV1	-2557,21209,-2557
chr2:229044604-229045379	chr2	+	229044630	229045229	True	NM_178821,NM_001142644,NM_030623	chr2,chr2,chr2	+,-,-	WDR69,SPHKAP,SPHKAP	-308359,1182,1182
chr5:151136328-151137249	chr5	+	151136342	151137237	True	NM_005754,NM_004045	chr5,chr5	+,-	G3BP1,ATOX1	14238,1025
chr11:4966910-4967529	chr11	+	4967010	4967507	True	NM_001004748,NM_001005329,NM_001004749	chr11,chr11,chr11	-,-,+	OR51A2,OR51A4,OR51A7	9489,876,-38470
chr8:92082566-92082844	chr8	+	92082597	92082723	True	NM_016023,NM_018710	chr8,chr8	+,-	OTUD6B,TMEM55A	-224,-29394
chr5:111188285-111189644	chr5	+	111188298	111189663	True	NM_001142476,NR_015370	chr5,chr5	-,+	C5orf13,NCRNA00219	-94383,306559
chr20:1208844-1210081	chr20	+	1208844	1209867	True	NM_018354,NM_001136566	chr20,chr20	-,+	C20orf46,RAD21L1	-43727,-2136
chr20:4228135-4228470	chr20	+	4228158	4228404	True	NM_000678,NR_033917	chr20,chr20	-,+	ADRA1D,LOC728228	1305,-54472
chr16:726416-726733	chr16	+	726443	726731	True	NM_001005920,NM_003961,NM_138769,NM_005861	chr16,chr16,chr16,chr16	-,+,+,+	JMJD8,RHBDL1,RHOT2,STUB1	7758,-419,-8361,3383
chr2:10264526-10265743	chr2	+	10264746	10265550	True	NM_001034,NM_001165931,NM_001037160	chr2,chr2,chr2	+,+,-	RRM2,RRM2,CYS1	-1934,-2102,-44208
chr13:39263984-39264279	chr13	+	39264026	39264316	True	NM_207361,NM_001144033	chr13,chr13	+,-	FREM2,STOML3	-2906,300730
chr1:32706123-32706338	chr1	+	32706128	32706270	True	NM_032648,NR_026850	chr1,chr1	+,-	FAM167B,MTMR9LP	6547,1091
chr11:73310451-73311325	chr11	+	73310902	73311205	True	NM_001130033,NM_015159	chr11,chr11	+,-	PLEKHB1,FAM168A	46017,-1674
chr6:108326789-108327666	chr6	+	108327082	108327493	True	NM_007214,NM_003269	chr6,chr6	-,+	SEC63,NR2E1	-47600,159721
chr9:130563209-130563974	chr9	+	130563618	130563734	True	NM_001018078,NM_170600,NM_004957	chr9,chr9,chr9	+,-,+	FPGS,SH2D3C,FPGS	1773,-22570,1419
chr1:235532744-235533859	chr1	+	235533159	235533487	True	NM_001079515,NM_031371,NM_003193	chr1,chr1,chr1	+,-,+	TBCE,ARID4B,TBCE	-2483,-41627,-2483
chr4:89078407-89079643	chr4	+	89078601	89079668	True	NM_000297,NM_004827	chr4,chr4	+,-	PKD2,ABCG2	-149865,394
chr19:830182-830573	chr19	+	830263	830392	True	NM_001700,NM_024888	chr19,chr19	+,-	AZU1,LPPR3	-2490,-8311
chr17:6985090-6985644	chr17	+	6985094	6985327	True	NM_182906,NM_006344,NM_201566	chr17,chr17,chr17	-,-,+	CLEC10A,CLEC10A,SLC16A13	-1494,-1494,-45751
chr9:35676438-35676940	chr9	+	35676492	35676813	True	NM_032818,NM_001216	chr9,chr9	-,+	C9orf100,CA9	-11214,-2630
chr14:75390080-75390468	chr14	+	75390269	75390455	True	NM_031464,NR_033814	chr14,chr14	-,+	RPS6KL1,DLST	-1124,-41733
chr4:74298316-74298902	chr4	+	74298330	74298918	True	NM_001134,NM_198889	chr4,chr4	+,-	AFP,ANKRD17	3014,-173828
chrX:114822662-114823509	chrX	+	114822721	114823306	True	NM_001136025,NM_020871,NM_001172335	chrX,chrX,chrX	+,-,+	PLS3,LRCH2,PLS3	4512,-354086,4512
chr2:225033985-225035033	chr2	+	225034048	225034804	True	NM_022915,NM_006216	chr2,chr2	+,-	MRPL44,SERPINE2	-211978,-130012
chr5:175978423-175978793	chr5	+	175978422	175978686	True	NM_014901,NM_017675,NM_001171976	chr5,chr5,chr5	-,+,+	RNF44,CDHR2,CDHR2	-14001,-2130,-8961
chr8:146027136-146027635	chr8	+	146027442	146027634	True	NM_000973,NM_033301,NM_213605	chr8,chr8,chr8	-,-,+	RPL8,RPL8,ZNF517	-9637,-9713,-3240
chr22:18923984-18924265	chr22	+	18924000	18924142	True	NM_001195226,NM_005675,NM_016335	chr22,chr22,chr22	-,+,-	PRODH,DGCR6,PRODH	-36,-30315,-14
chr20:3219343-3219562	chr20	+	3219458	3219544	True	NM_001174090,NM_001174089,NM_032034,NM_181493	chr20,chr20,chr20,chr20	-,-,-,+	SLC4A11,SLC4A11,SLC4A11,ITPA	-623,393,-1085,-29453
chr11:74952329-74952716	chr11	+	74952364	74952654	True	NM_001195528,NR_029891	chr11,chr11	+,-	LOC441617,MIR326	-465,93626
chr13:61069895-61071161	chr13	+	61070005	61070969	True	NM_001042517,NM_001146070	chr13,chr13	-,+	DIAPH3,TDRD3	-331886,-98636
chr11:118275060-118276717	chr11	+	118275182	118276570	True	NR_033759,NM_001040651,NM_006476	chr11,chr11,chr11	+,-,+	ATP5L,CD3D,ATP5L	-3140,-61723,-3140
chrX:113292159-113293156	chrX	+	113292211	113292812	True	NM_000868,NM_000640	chrX,chrX	+,-	HTR2C,IL13RA2	525738,959460
chr1:170634929-170635413	chr1	+	170634951	170635289	True	NM_022716,NM_006902,NR_026957	chr1,chr1,chr1	+,+,-	PRRX1,PRRX1,LOC284688	-1689,-1689,-381602
chr7:135194316-135194589	chr7	+	135194369	135194597	True	NM_001190847,NM_001190850,NM_001190849,NM_001190848,NM_001008225,NM_015135,NM_013316	chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,+,-	CNOT4,CNOT4,CNOT4,CNOT4,CNOT4,NUP205,CNOT4	328,328,328,328,328,48064,328
chr11:124669431-124669656	chr11	+	124669475	124669607	True	NM_006176,NM_024631	chr11,chr11	+,-	NRGN,C11orf61	-59697,742
chr11:71292388-71293226	chr11	+	71292472	71293242	True	NM_001012710,NM_001005405	chr11,chr11	+,-	KRTAP5-10,KRTAP5-11	-15915,729
chr19:55864163-55864888	chr19	+	55864174	55864912	True	NM_144613,NM_032701,NM_001145402	chr19,chr19,chr19	-,+,-	COX6B2,SUV420H2,FAM71E2	1320,-13004,9758
chr6:43485796-43486512	chr6	+	43485802	43486368	True	NM_004875,NM_001012974,NM_203290,NM_015388	chr6,chr6,chr6,chr6	+,-,+,-	POLR1C,C6orf154,POLR1C,YIPF3	-1062,-7378,-1076,-1074
chr19:35979329-35979681	chr19	+	35979342	35979644	True	NM_005306,NM_207392	chr19,chr19	+,-	FFAR2,KRTDAP	-38776,1762
chr1:15911700-15912398	chr1	+	15911736	15912062	True	NM_032341,NM_024758	chr1,chr1	+,-	DDI2,AGMAT	31890,-131
chr6:4705123-4706425	chr6	+	4705709	4706459	True	NR_026590,NM_006638	chr6,chr6	+,-	CDYL,RPP40	-67,297862
chr16:4163456-4163817	chr16	+	4163468	4163858	True	NM_001116,NM_032575	chr16,chr16	-,+	ADCY9,GLIS2	2378,218366
chr12:66220094-66221787	chr12	+	66220236	66221697	True	NM_003483,NR_026825,NM_003484	chr12,chr12,chr12	+,-,+	HMGA2,RPSAP52,HMGA2	-2054,26,-2054
chr12:8767493-8768566	chr12	+	8767502	8768480	True	NM_020661,NM_020734	chr12,chr12	-,+	AICDA,RIMKLB	-2060,82037
chr15:52588926-52589243	chr15	+	52588968	52589235	True	NM_018728,NM_002748	chr15,chr15	-,+	MYO5C,MAPK6	-973,-277611
chr15:50551629-50552511	chr15	+	50551797	50552214	True	NM_002112,NM_003645	chr15,chr15	-,+	HDC,SLC27A2	6007,-77455
chrX:52650195-52650510	chrX	+	52650203	52650516	True	NR_027250,NM_173358	chrX,chrX	+,-	SSX8,SSX7	1468,33485
chr2:96998598-96999636	chr2	+	96998778	96999614	True	NM_015341,NM_001163523,NM_001163524,NM_178495,NM_001008949,NM_014014	chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,+,-	NCAPH,ITPRIPL1,ITPRIPL1,ITPRIPL1,ITPRIPL1,SNRNP200	1869,-7760,-6884,-6894,-7767,-27471
chr4:154077359-154079214	chr4	+	154077508	154079247	True	NM_001130067,NR_001562	chr4,chr4	+,-	TRIM2,ANXA2P1	-3290,150766
chr19:47335754-47336245	chr19	+	47335916	47336061	True	NR_024258,NM_004491	chr19,chr19	-,+	SNAR-E,GRLF1	-1955,85871
chr20:18452548-18452958	chr20	+	18452639	18452769	True	NR_036160,NM_006466,NM_001099407	chr20,chr20,chr20	+,+,-	MIR3192,POLR3F,C20orf12	-1432,-4658,-4810
chr9:39357307-39358021	chr9	+	39357560	39357818	True	NM_033655,NM_001040065,NM_001085452	chr9,chr9,chr9	-,+,+	CNTNAP3,FAM75A2,FAM75A1	-69260,-1912,-1912
chr2:171573959-171574301	chr2	+	171574119	171574326	True	NR_027433,NM_001003845	chr2,chr2	-,+	LOC440925,SP5	-3042,-2313
chr2:179316542-179316874	chr2	+	179316561	179316725	True	NM_001042702,NM_001139518,NM_001139517,NM_003690	chr2,chr2,chr2,chr2	+,-,-,-	DFNB59,PRKRA,PRKRA,PRKRA	-449,-1206,-1077,-603
chr20:33132572-33133508	chr20	+	33132661	33133448	True	NM_080476,NM_181509	chr20,chr20	-,+	PIGU,MAP1LC3A	131691,1243
chr19:32893505-32894563	chr19	+	32893614	32894590	True	NM_207325,NM_032139,NM_001172774	chr19,chr19,chr19	+,-,+	DPY19L3,ANKRD27,DPY19L3	2431,271562,2064
chr19:46716902-46717210	chr19	+	46716929	46717197	True	NR_027003,NM_207393	chr19,chr19	+,-	DKFZp434J0226,IGFL3	-3481,-88998
chr1:156545135-156546737	chr1	+	156545180	156546462	True	NM_001105669,NM_178229	chr1,chr1	+,-	TTC24,IQGAP3	3056,-2784
chr2:202900694-202900919	chr2	+	202900699	202900865	True	NM_001005781,NM_003507	chr2,chr2	-,+	SUMO1,FZD7	202507,-1440
chr9:95858268-95858480	chr9	+	95858280	95858358	True	NM_032310,NM_004148	chr9,chr9	+,-	C9orf89,NINJ1	91,38262
chr7:97909646-97910513	chr7	+	97909950	97910556	True	NM_001159491,NM_015395,NM_015379	chr7,chr7,chr7	+,-,+	BRI3,TECPR1,BRI3	422,-28482,422
chr19:6767460-6767955	chr19	+	6767507	6767787	True	NM_005490,NM_005428	chr19,chr19	-,+	SH2D3A,VAV1	16,4934
chr7:94285395-94285794	chr7	+	94285647	94285741	True	NM_003919,NM_001099400,NM_001184962,NM_001184961,NM_001172438,NM_001099401,NM_015068,NM_001172437,NM_001040152	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,+,+,+,-,+,+,+	SGCE,SGCE,PEG10,PEG10,PEG10,SGCE,PEG10,PEG10,PEG10	-126,-126,-61,-61,-16,-126,-61,-16,-61
chr11:62341418-62341687	chr11	+	62341421	62341677	True	NM_001404,NM_000327	chr11,chr11	-,+	EEF1G,ROM1	21,38535
chr9:2749186-2750124	chr9	+	2749249	2750088	True	NM_133497,NM_014878	chr9,chr9	+,-	KCNV2,KIAA0020	-31787,94101
chr9:136889248-136889850	chr9	+	136889392	136889827	True	NM_003371,NR_015427	chr9,chr9	-,+	VAV2,NCRNA00094	-31946,733
chr20:5101611-5102921	chr20	+	5101761	5102160	True	NM_001009923,NM_003818,NM_001009925,NM_001009924,NR_028370,NM_002592,NM_014145,NM_182649	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	-,+,-,-,+,-,-,-	C20orf30,CDS2,C20orf30,C20orf30,PCNA-AS1,PCNA,C20orf30,PCNA	-8028,5321,-8028,-8028,-1587,5161,-8028,-1114
chr1:36931990-36932349	chr1	+	36932198	36932378	True	NM_024676,NM_031280	chr1,chr1	+,-	SH3D21,MRPS15	-159541,-2158
chr10:74936363-74937969	chr10	+	74937399	74937971	True	NR_024203,NM_173348,NM_007265,NM_001135752,NM_001135753	chr10,chr10,chr10,chr10,chr10	-,+,-,-,-	ECD,FAM149B1,ECD,ECD,ECD	-9546,-9584,-9546,-9546,-9546
chr3:23313853-23314750	chr3	+	23314045	23314503	True	NM_020345,NM_152653	chr3,chr3	-,+	NKIRAS1,UBE2E2	644084,-69319
chr13:52975778-52977707	chr13	+	52975871	52977515	True	NM_001098525,NM_199263,NM_018676	chr13,chr13,chr13	+,-,-	CKAP2,THSD1,THSD1	51979,3164,3164
chrX:18239011-18239377	chrX	+	18239026	18239349	True	NM_153346,NM_001184767,NM_003159	chrX,chrX,chrX	-,-,+	BEND2,BEND2,CDKL5	-2,-2,204375
chr3:17730075-17730751	chr3	+	17730128	17730762	True	NM_001134381,NR_037465	chr3,chr3	-,+	TBC1D5,MIR3714	10800,-755498
chr15:89919049-89920119	chr15	+	89919053	89920135	True	NR_029692,NR_015411,NM_002693	chr15,chr15,chr15	+,+,-	MIR9-3,LOC254559,POLG	-7856,1137,-41027
chr13:114057120-114057407	chr13	+	114057129	114057393	True	NM_024719,NM_017905	chr13,chr13	-,+	GRTP1,TMCO3	-38666,87914
chr19:8457259-8457665	chr19	+	8457291	8457547	True	NM_198471,NM_004218	chr19,chr19	-,+	KANK3,RAB11B	-49145,-2137
chr1:151122081-151122706	chr1	+	151122233	151122560	True	NM_001178061,NM_030913,NM_001178062,NM_024575,NM_001204848	chr1,chr1,chr1,chr1,chr1	-,-,-,+,+	SEMA6C,SEMA6C,SEMA6C,TNFAIP8L2,TNFAIP8L2-SCNM1	-3093,-3093,-3093,6544,6544
chr1:26759519-26759866	chr1	+	26759619	26759877	True	NM_024887,NM_205861,NM_173574	chr1,chr1,chr1	+,+,-	DHDDS,DHDDS,ZNF683	-872,-872,-60353
chr5:109071347-109072208	chr5	+	109071597	109072117	True	NM_014819,NM_002372	chr5,chr5	-,+	PJA2,MAN2A1	-325922,-46497
chr9:116163024-116163293	chr9	+	116163124	116163264	True	NR_027261,NM_017443,NM_152786,NM_000031	chr9,chr9,chr9,chr9	-,-,+,-	POLE3,POLE3,C9orf43,ALAD	9741,9815,9757,404
chr2:70519170-70519570	chr2	+	70519357	70519481	True	NM_032822,NM_003096,NM_016297	chr2,chr2,chr2	-,-,+	FAM136A,SNRPG,PCYOX1	9795,1444,-34181
chr3:195623812-195625094	chr3	+	195623831	195625125	True	NM_001098516,NM_001010938	chr3,chr3	+,-	MUC20,TNK2	-172784,-1399
chr16:21435927-21436221	chr16	+	21435987	21436052	True	NR_024456,NR_026675,NM_130464	chr16,chr16,chr16	-,+,-	LOC100190986,NCRNA00169,NPIPL3	9779,-123869,661
chr5:72869557-72870070	chr5	+	72869684	72870046	True	NM_023039,NM_032175	chr5,chr5	-,+	ANKRA2,UTP15	-8173,-8145
chr14:58890090-58891440	chr14	+	58890391	58891167	True	NM_012460,NM_014749	chr14,chr14	-,+	TIMM9,KIAA0586	3116,3542
chr11:118087904-118088291	chr11	+	118087914	118088190	True	NM_001098526,NM_153206,NM_000733	chr11,chr11,chr11	-,-,+	AMICA1,AMICA1,CD3E	7669,-3840,87104
chr2:27665667-27666105	chr2	+	27665678	27666098	True	NM_177983,NM_173853,NM_001168364	chr2,chr2,chr2	-,+,+	PPM1G,KRTCAP3,KRTCAP3	-33182,-496,-496
chr9:95707509-95708241	chr9	+	95707753	95708267	True	NM_001083536,NM_031486	chr9,chr9	+,-	FGD3,ZNF484	1333,-67463
chr16:69961137-69961447	chr16	+	69961161	69961399	True	NR_029681,NM_199424,NR_003610	chr16,chr16,chr16	+,+,-	MIR140,WWP2,PDXDC2P	5584,-2311,138502
chr19:49891758-49892733	chr19	+	49892027	49892657	True	NM_144688,NM_003598	chr19,chr19	+,-	CCDC155,TEAD2	-603,-26313
chr1:11072438-11072660	chr1	+	11072512	11072660	True	NM_007375,NM_001170754	chr1,chr1	+,-	TARDBP,C1orf127	18,-30418
chr11:56949810-56950051	chr11	+	56949819	56950011	True	NM_001005210,NM_005161	chr11,chr11	+,-	LRRC55,APLNR	-649,54966
chr3:14443142-14443420	chr3	+	14443149	14443467	True	NM_001134367,NM_001080423,NM_001134368,NM_003043	chr3,chr3,chr3,chr3	+,-,+,+	SLC6A6,GRIP2,SLC6A6,SLC6A6	638,140171,638,638
chr3:119379790-119380304	chr3	+	119379808	119380346	True	NM_033364,NM_022135	chr3,chr3	+,-	C3orf15,POPDC2	41522,-404
chr18:44337375-44337575	chr18	+	44337467	44337615	True	NM_013305,NM_031303	chr18,chr18	-,+	ST8SIA5,KATNAL2	-428,189171
chr4:53524260-53524957	chr4	+	53524308	53524920	True	NM_022832,NR_024031,NM_001134223	chr4,chr4,chr4	-,+,-	USP46,KIAA0114,USP46	632,53700,-1549
chr22:39271132-39272835	chr22	+	39271136	39272574	True	NM_014292,NM_145699	chr22,chr22	-,+	CBX6,APOBEC3A	-2878,80952
chrX:68835893-68836118	chrX	+	68835999	68836113	True	NM_001002254,NM_001399,NM_001005609,NM_001005610,NM_001005613,NM_001005612	chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,+	AWAT2,EDA,EDA,EDA,EDA,EDA	433725,-139,-139,-139,-139,-139
chr11:27113999-27114837	chr11	+	27114086	27114862	True	NM_003986,NM_030771	chr11,chr11	+,-	BBOX1,CCDC34	-51628,269983
chr7:56019244-56019581	chr7	+	56019360	56019590	True	NM_015969,NM_207366	chr7,chr7	+,-	MRPS17,SEPT14	20,-88878
chr18:46065373-46065596	chr18	+	46065391	46065618	True	NM_001142397,NM_001039360,NM_014772	chr18,chr18,chr18	+,-,+	CTIF,ZBTB7C,CTIF	-15,-401711,-15
chr3:125775744-125776522	chr3	+	125775953	125776475	True	NM_001008487,NM_001012337	chr3,chr3	-,+	SLC41A3,ROPN1B	-335,-87976
chr21:28338615-28338850	chr21	+	28338663	28338899	True	NR_024357,NM_007038	chr21,chr21	+,-	NCRNA00113,ADAMTS5	755798,590
chr16:87800486-87802075	chr16	+	87800822	87801243	True	NM_020655,NM_001184856,NM_017566,NM_001184854	chr16,chr16,chr16,chr16	+,-,-,-	JPH3,KLHDC4,KLHDC4,KLHDC4	-164375,-1224,-1224,-1224
chr17:8284569-8284965	chr17	+	8284571	8284813	True	NM_213597,NM_000987,NM_153007	chr17,chr17,chr17	-,-,+	KRBA2,RPL26,ODF4	-9713,1802,-41434
chr11:102323115-102323431	chr11	+	102323137	102323377	True	NM_001166,NM_052932	chr11,chr11	+,-	BIRC2,TMEM123	-105222,448
chr11:10585112-10585797	chr11	+	10585136	10585826	True	NM_006691,NR_034093	chr11,chr11	-,+	LYVE1,LOC100129827	4589,-22359
chr19:28284119-28284489	chr19	+	28284149	28284501	True	NR_027318,NR_027301	chr19,chr19	+,-	LOC148145,LOC148189	1171536,397
chr3:36942086-36943376	chr3	+	36942532	36943424	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	43174,91416
chr8:30239360-30239712	chr8	+	30239592	30239758	True	NM_001100916,NM_006867,NM_001008712,NM_001008711,NM_001008710	chr8,chr8,chr8,chr8,chr8	-,+,+,+,+	MBOAT4,RBPMS,RBPMS,RBPMS,RBPMS	-237392,2185,2185,2185,2185
chr20:3139413-3140315	chr20	+	3139512	3140157	True	NM_014731,NM_014948,NM_199415,NM_021826,NM_033453	chr20,chr20,chr20,chr20,chr20	-,-,-,-,+	ProSAPiP1,UBOX5,UBOX5,FASTKD5,ITPA	9103,436,436,428,49898
chr17:8342704-8343319	chr17	+	8342867	8343313	True	NM_030808,NM_001146684,NM_001025579	chr17,chr17,chr17	+,-,+	NDEL1,RNF222,NDEL1	-3739,-41723,-3739
chr5:37251399-37252361	chr5	+	37251542	37252153	True	NM_018034,NM_023073	chr5,chr5	+,-	WDR70,C5orf42	127258,-2012
chr11:18477537-18477815	chr11	+	18477539	18477605	True	NM_144972,NM_001144071,NM_006292	chr11,chr11,chr11	+,+,-	LDHAL6A,LDHAL6A,TSG101	-216,-216,70934
chr1:241804187-241804419	chr1	+	241804209	241804447	True	NM_014322,NM_144625,NM_001821	chr1,chr1,chr1	-,+,-	OPN3,WDR64,CHML	-508,11132,-4977
chr12:53039136-53040100	chr12	+	53039150	53040004	True	NM_199187,NM_000423	chr12,chr12	+,-	KRT18,KRT2	302650,6005
chr2:11672386-11673596	chr2	+	11672408	11673388	True	NR_003095,NM_148903,NM_033090,NM_014668	chr2,chr2,chr2,chr2	-,+,+,+	E2F6,GREB1,GREB1,GREB1	-66111,6691,9462,853
chr5:140014660-140016489	chr5	+	140014834	140016507	True	NM_000591,NM_001040021,NM_018502,NM_001174104,NM_001174105	chr5,chr5,chr5,chr5,chr5	-,-,+,-,-	CD14,CD14,TMCO6,CD14,CD14	-1799,-1548,2504,-1548,-1548
chr12:133652600-133653872	chr12	+	133652613	133653911	True	NM_003440,NM_001164715	chr12,chr12	+,-	ZNF140,ZNF605	3125,-119721
chr12:48550559-48550856	chr12	+	48550595	48550745	True	NM_024095,NM_001013635	chr12,chr12	-,+	ASB8,C12orf68	682,26620
chr7:140103382-140103732	chr7	+	140103505	140103715	True	NM_001008749,NM_032295,NM_207113	chr7,chr7,chr7	+,-,-	RAB19,SLC37A3,SLC37A3	127,-5194,-5194
chr12:49350299-49350997	chr12	+	49350301	49350739	True	NM_001659,NM_005430	chr12,chr12	-,+	ARF3,WNT1	564,21496
chr7:128003717-128004437	chr7	+	128003878	128004479	True	NM_001114726,NM_001098786,NM_001174164	chr7,chr7,chr7	-,+,-	PRRT4,C7orf68,PRRT4	-2139,91404,-2139
chr7:56227684-56228949	chr7	+	56227709	56228435	True	NM_015411,NM_001145712	chr7,chr7	+,-	SUMF2,LOC389493	-95843,-43619
chr10:46994317-46994543	chr10	+	46994317	46994581	True	NM_014696,NM_031912	chr10,chr10	+,-	GPRIN2,SYT15	-822,-23716
chr2:86331863-86332635	chr2	+	86332123	86332577	True	NM_015425,NM_017952	chr2,chr2	-,+	POLR1A,PTCD3	751,727
chr10:133998058-133998524	chr10	+	133998065	133998380	True	NM_006426,NM_173575	chr10,chr10	+,-	DPYSL4,STK32C	2033,123151
chr12:54688771-54689061	chr12	+	54688910	54689104	True	NM_001136023,NM_006163,NR_002944	chr12,chr12,chr12	-,-,+	NFE2,NFE2,HNRNPA1P10	5737,490,-14428
chr7:7568842-7569138	chr7	+	7568949	7569173	True	NM_001037763,NM_019005	chr7,chr7	-,+	COL28A1,MIOS	6337,37442
chr9:37120281-37120496	chr9	+	37120281	37120457	True	NM_016734,NM_032226	chr9,chr9	-,+	PAX5,ZCCHC7	-85805,11
chr1:109394058-109395884	chr1	+	109394088	109395558	True	NM_152763,NR_034168	chr1,chr1	-,+	AKNAD1,LOC642864	4208,4280
chr1:201917986-201919842	chr1	+	201918430	201919569	True	NM_006335,NM_012134	chr1,chr1	+,-	TIMM17A,LMOD1	5049,-2714
chr19:17503001-17503784	chr19	+	17503300	17503482	True	NM_004335,NM_138401	chr19,chr19	-,+	BST2,FAM125A	12952,27429
chr14:74891235-74892670	chr14	+	74891235	74892351	True	NM_001105579,NM_194279	chr14,chr14	-,+	TMEM90A,ISCA2	504,68098
chr6:99837158-99837709	chr6	+	99837371	99837718	True	NM_017421,NM_001195131	chr6,chr6	-,+	COQ3,LOC100130890	4421,131151
chr5:25912163-25912392	chr5	+	25912196	25912432	True	NR_037896,NM_020227	chr5,chr5	-,+	LOC340107,PRDM9	-1071504,-2404523
chr7:56031261-56031694	chr7	+	56031265	56031743	True	NM_001202469,NM_001483,NM_004577	chr7,chr7,chr7	+,+,-	GBAS,GBAS,PSPH	526,526,87575
chr19:6882999-6883314	chr19	+	6883264	6883344	True	NR_024075,NM_001974	chr19,chr19	-,+	EMR4P,EMR1	107563,4237
chr19:56151664-56151933	chr19	+	56151747	56151827	True	NM_016535,NM_016202,NM_013301,NM_001163423,NM_203374,NM_207115	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,-,+	ZNF581,ZNF580,CCDC106,ZNF580,ZNF784,ZNF580	3158,1590,7126,1635,-15806,564
chr17:6861623-6863063	chr17	+	6862150	6863078	True	NM_000697,NR_029712	chr17,chr17	+,-	ALOX12,MIR195	36305,57992
chr12:2922293-2922695	chr12	+	2922575	2922712	True	NM_018463,NM_031474	chr12,chr12	+,-	ITFG2,NRIP2	-853,21572
chr7:100488788-100489028	chr7	+	100488853	100489005	True	NM_000665,NM_015908,NM_015831,NM_001015072	chr7,chr7,chr7,chr7	-,+,-,-	ACHE,SRRT,ACHE,UFSP1	4586,-16203,4586,-1514
chr10:60029274-60029569	chr10	+	60029298	60029515	True	NM_152230,NM_018464	chr10,chr10	-,+	IPMK,CISD1	-1604,-454
chr5:140715091-140715888	chr5	+	140715185	140715816	True	NM_031993,NM_005642,NM_032009,NM_032011,NM_018915,NM_018916,NM_018912	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,-,+,+,+,+,+	PCDHGA1,TAF7,PCDHGA2,PCDHGA3,PCDHGA2,PCDHGA3,PCDHGA1	-4997,-14834,2537,7784,2537,7784,-4997
chr1:219347456-219348153	chr1	+	219347617	219348089	True	NM_138794,NM_018713	chr1,chr1	+,-	LYPLAL1,SLC30A10	-479,753954
chr1:110452920-110453284	chr1	+	110452942	110453266	True	NM_172210,NM_000757,NM_172212,NM_139053,NM_172211	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	CSF1,CSF1,CSF1,EPS8L3,CSF1	-34,-34,-34,-146298,-34
chrX:2608036-2608436	chrY	+	2558051	2558465	False	NM_003140,NM_002414,NM_001122898	chrY,chrY,chrY	-,+,+	SRY,CD99,CD99	97377,762,762
chrX:2608036-2608436	chrX	+	2608051	2608465	True	NR_037842,NM_002414,NM_001122898	chrX,chrX,chrX	-,+,+	NCRNA00102,CD99,CD99	-74663,762,762
chr5:1443941-1444331	chr5	+	1444153	1444365	True	NM_182632,NM_001044	chr5,chr5	+,-	SLC6A18,SLC6A3	-218744,1228
chr3:148712169-148712919	chr3	+	148712201	148712667	True	NM_001184721,NM_001184720,NM_004130,NM_003071	chr3,chr3,chr3,chr3	+,+,+,-	GYG1,GYG1,GYG1,HLTF	-3064,-3064,-3064,91732
chrY:19991217-19992494	chrY	+	19991436	19992038	True	NM_004825,NM_001001722	chrY,chrY	-,-	CDY2A,CDY2B	112,111
chrY:19991217-19992494	chrY	-	20138273	20138330	False	NM_004825,NM_001001722	chrY,chrY	+,+	CDY2A,CDY2B	-658,-657
chr19:58664115-58664635	chr19	+	58664233	58664482	True	NM_024620,NM_133502	chr19,chr19	-,+	ZNF329,ZNF274	-2085,29913
chr2:37304744-37305503	chr2	+	37304924	37305544	True	NM_174931,NM_019024	chr2,chr2	+,-	CCDC75,HEATR5B	6049,5991
chr5:138678003-138679497	chr5	+	138678186	138679296	True	NM_016480,NM_001033112,NM_005847	chr5,chr5,chr5	+,+,-	PAIP2,PAIP2,SLC23A1	-718,-103,39794
chr17:79317537-79318037	chr17	+	79317579	79318033	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	55506,-13105
chr22:42527156-42527578	chr22	+	42527252	42527509	True	NM_001025161,NM_000106,NR_034118	chr22,chr22,chr22	-,-,+	CYP2D6,CYP2D6,LOC100132273	-369,-369,-40366
chr22:42527156-42527578	chr22	+	42540924	42541181	False	NR_002570,NR_034118	chr22,chr22	-,+	CYP2D7P1,LOC100132273	-349,-54038
chr12:42983243-42983480	chr12	+	42983256	42983494	True	NM_016488,NM_153026	chr12,chr12	+,-	PPHLN1,PRICKLE1	-263360,128
chr12:56430273-56431397	chr12	+	56430340	56431436	True	NM_006928,NM_001029	chr12,chr12	-,+	PMEL,RPS26	-69844,4249
chr5:114963312-114964381	chr5	+	114963464	114964174	True	NM_181836,NM_001284,NM_001164468,NM_001164469	chr5,chr5,chr5,chr5	-,+,-,-	TMED7,AP3S1,TMED7-TICAM2,TMED7-TICAM2	-1588,213444,-1588,-1588
chr2:231078458-231079065	chr2	+	231078518	231079106	True	NM_004510,NM_004509,NM_080424,NM_001005176	chr2,chr2,chr2,chr2	-,-,-,+	SP110,SP110,SP110,SP140	5771,5771,5771,11338
chr21:44848635-44849997	chr21	+	44848898	44849965	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	19938,-1896
chr14:77352591-77353704	chr14	+	77352847	77353684	True	NM_015305,NM_194287	chr14,chr14	-,+	ANGEL1,C14orf166B	-73564,-60174
chr17:1091413-1092149	chr17	+	1091525	1092104	True	NM_001164405,NM_021962,NM_001159746	chr17,chr17,chr17	+,-,-	BHLHA9,ABR,ABR	81753,-8394,-909
chr6:170103784-170104498	chr6	+	170103916	170104514	True	NM_182552,NM_001202550,NM_001029863	chr6,chr6,chr6	-,-,+	WDR27,WDR27,C6orf120	-1757,-1757,-1718
chr8:145580329-145580606	chr8	+	145580450	145580538	True	NM_024531,NM_012162,NR_015428,NM_024555	chr8,chr8,chr8,chr8	+,-,-,-	GPR172A,FBXL6,C8ORFK29,FBXL6	1686,1644,-1945,1644
chr12:15114172-15114492	chr12	+	15114173	15114497	True	NM_001175,NM_006205	chr12,chr12	-,+	ARHGDIB,PDE6H	115,11458
chr4:3954376-3954783	chr4	+	3954638	3954724	True	NM_000683,NR_024253	chr4,chr4	+,-	ADRA2C,LOC348926	-186393,2474
chr11:133902911-133903745	chr11	+	133903019	133903735	True	NM_014987,NR_027276	chr11,chr11	-,+	IGSF9B,LOC100128239	-76139,-903
chr17:78448042-78448283	chr17	+	78448071	78448299	True	NM_002522,NM_173627	chr17,chr17	-,+	NPTX1,FLJ35220	2155,-59155
chr16:70098320-70098642	chr16	+	70098414	70098678	True	NR_036265,NR_003610	chr16,chr16	+,-	MIR1972-2,PDXDC2P	-34216,1223
chr16:70098320-70098642	chr16	-	15070057	15070293	False	NM_015027,NM_173474	chr16,chr16	+,-	PDXDC1,NTAN1	-1275,79592
chr17:5390176-5390638	chr17	+	5390261	5390411	True	NM_016041,NM_024039	chr17,chr17	-,+	DERL2,MIS12	-767,-65
chr1:33504580-33505143	chr1	+	33504664	33504934	True	NM_001625,NR_037592,NM_001199199,NM_013411,NR_037591,NM_052998	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,+	AK2,AK2,AK2,AK2,AK2,ADC	-2152,-2152,-2152,-2152,-2152,41779
chr1:249149590-249149799	chr1	+	249149597	249149693	True	NM_001193328,NM_001136036,NM_024836	chr1,chr1,chr1	-,-,+	ZNF692,ZNF692,ZNF672	3672,3482,-17118
chr15:102506046-102506255	chr15	+	102506187	102506275	True	NR_034090	chr15	-	DDX11L9	13071
chr16:28518902-28519332	chr16	+	28518946	28519174	True	NM_018690,NM_145659	chr16,chr16	+,-	APOBR,IL27	-13004,-791
chr8:37962899-37963108	chr8	+	37962922	37963056	True	NM_004674,NM_000349,NM_001105214	chr8,chr8,chr8	+,-,+	ASH2L,STAR,ASH2L	-26,45594,292
chr16:22374556-22375782	chr16	+	22374605	22375764	True	NM_018119,NM_001802	chr16,chr16	+,-	POLR3E,CDR2	-65928,10225
chr9:19045939-19046622	chr9	+	19046101	19046363	True	NM_153707,NM_006570	chr9,chr9	-,+	FAM154A,RRAGA	-12845,3008
chr7:138482053-138482810	chr7	+	138482366	138482758	True	NM_020632,NM_130840,NM_001085429	chr7,chr7,chr7	-,-,+	ATP6V0A4,ATP6V0A4,TMEM213	233,233,-20
chr15:55484061-55484944	chr15	+	55484168	55484945	True	NM_004855,NM_016304	chr15,chr15	+,-	PIGB,RSL24D1	126187,4337
chr10:116442157-116443251	chr10	+	116442417	116443232	True	NM_001003408,NM_020940,NM_001003407	chr10,chr10,chr10	-,+,-	ABLIM1,FAM160B1,ABLIM1	1233,138270,1233
chr19:40806992-40807922	chr19	+	40807076	40807212	True	NM_001031696,NM_001626	chr19,chr19	+,-	PLD3,AKT2	47119,-15811
chr8:86164206-86165265	chr8	+	86164532	86165105	True	NM_001099673,NM_198584	chr8,chr8	-,+	C8orf59,CA13	-31889,-6875
chr22:46545556-46545861	chr22	+	46545564	46545892	True	NM_018280,NM_001001928,NM_005036	chr22,chr22,chr22	-,+,+	C22orf26,PPARA,PPARA	-95540,606,606
chr16:66461548-66462089	chr16	+	66461558	66462011	True	NM_001172643,NM_001136106,NM_001197224,NM_001178020,NM_001197225	chr16,chr16,chr16,chr16,chr16	-,+,+,+,+	TK2,BEAN1,BEAN1,BEAN1,BEAN1	122233,-793,-793,-793,-793
chr11:34460807-34461440	chr11	+	34460835	34461437	True	NM_001752,NM_198381	chr11,chr11	+,-	CAT,ELF5	-414,71959
chr9:84608621-84609977	chr9	+	84608826	84609832	True	NM_005077,NM_001001670	chr9,chr9	-,+	TLE1,FAM75D1	-305230,-5190
chr9:84608621-84609977	chr9	+	84563626	84563712	False	NM_005077,NM_207416	chr9,chr9	-,+	TLE1,FAM75D3	-260030,-5298
chr9:84608621-84609977	chr9	+	84533462	84533548	False	NM_001145197,NR_026851,NM_005077	chr9,chr9,chr9	+,+,-	FAM75D4,FAM75D5,TLE1	9794,-5197,-229866
chr9:84608621-84609977	chr9	+	84548534	84548620	False	NM_005077,NM_001145197,NM_207416	chr9,chr9,chr9	-,+,+	TLE1,FAM75D4,FAM75D3	-244938,-5278,9794
chr19:2052323-2053000	chr19	+	2052467	2052787	True	NM_001031735,NM_017572,NM_199054	chr19,chr19,chr19	+,-,-	IZUMO4,MKNK2,MKNK2	44080,-1224,-1224
chr13:55627540-55628003	chr13	+	55627540	55627775	True	NR_031628,NM_006418	chr13,chr13	-,+	MIR1297,OLFM4	-741357,-2024725
chr8:124471209-124471616	chr8	+	124471493	124471633	True	NM_018024,NM_014109	chr8,chr8	+,-	WDYHV1,ATAD2	-42579,-62788
chr15:44481777-44482856	chr15	+	44482048	44482865	True	NM_032892,NM_138423	chr15,chr15	-,+	FRMD5,CASC4	4615,98043
chr5:39520528-39520903	chr5	+	39520527	39520945	True	NM_001343,NM_003999	chr5,chr5	-,+	DAB2,OSMR	-95192,-674480
chr13:29612583-29613063	chr13	+	29612923	29613111	True	NM_181785,NM_001033602	chr13,chr13	-,+	SLC46A3,MTUS2	-319773,-14226
chr17:6940967-6941548	chr17	+	6941063	6941567	True	NM_153357,NM_201566	chr17,chr17	-,+	SLC16A11,SLC16A13	5725,-1727
chrX:56785109-56786508	chrX	+	56785239	56786469	True	NR_015367,NR_002308	chrX,chrX	+,-	LOC550643,LOC442454	-29573,-21222
chr11:58499334-58500453	chr11	+	58499373	58500500	True	NM_005838,NM_000614,NM_201648	chr11,chr11,chr11	-,+,-	GLYAT,CNTF,GLYAT	-4,-109278,-4
chr2:120540440-120542053	chr2	+	120540637	120541730	True	NM_002980,NM_002830	chr2,chr2	-,+	SCTR,PTPN4	-258609,-23482
chr6:50788034-50789165	chr6	+	50788272	50789173	True	NM_001037498,NM_003221	chr6,chr6	-,+	DEFB112,TFAP2B	-771908,-1884
chr1:18958592-18958800	chr1	+	18958607	18958844	True	NM_001135254,NM_002584,NM_152232,NM_013945	chr1,chr1,chr1,chr1	+,+,-,+	PAX7,PAX7,TAS1R2,PAX7	-1162,-1162,227361,-1162
chr13:61988039-61988411	chr13	+	61988039	61988449	True	NM_022843,NM_001146070	chr13,chr13	-,+	PCDH20,TDRD3	1256,-1016663
chr17:29159069-29159312	chr17	+	29159072	29159358	True	NM_015986,NM_024857	chr17,chr17	-,+	CRLF3,ATAD5	-7294,-100
chr12:122065382-122065736	chr12	+	122065500	122065584	True	NM_173855,NM_032790	chr12,chr12	-,+	MORN3,ORAI1	42026,-1096
chr17:72364998-72365326	chr17	+	72365118	72365266	True	NM_181790,NM_001080466	chr17,chr17	+,-	GPR142,BTBD17	-1524,-7160
chr1:213090257-213090490	chr1	+	213090350	213090484	True	NM_001136474,NR_027286	chr1,chr1	+,-	VASH2,NCRNA00292	33402,-58870
chr9:5827900-5828963	chr9	+	5828155	5828921	True	NM_024896,NM_005511	chr9,chr9	-,+	ERMP1,MLANA	4220,61987
chr8:39364891-39366853	chr8	+	39364975	39366871	True	NM_001190956,NR_001569	chr8,chr8	+,-	ADAM18,ADAM3A	75215,13654
chr11:370876-371823	chr11	+	371000	371808	True	NM_178537,NM_001135054	chr11,chr11	+,-	B4GALNT4,SIGIRR	-1256,43241
chr9:79054871-79055420	chr9	+	79055047	79055455	True	NM_001097634,NM_018339	chr9,chr9	+,-	GCNT1,RFK	1126,-45603
chr8:144798686-144798912	chr8	+	144798693	144798839	True	NM_001162914,NM_139021	chr8,chr8	-,+	LOC100130274,MAPK15	-8414,-237
chr10:6022612-6024143	chr10	+	6022876	6023764	True	NM_032807,NR_033494,NM_002189,NM_172200	chr10,chr10,chr10,chr10	+,-,-,-	FBXO18,IL15RA,IL15RA,IL15RA	-86579,-2734,-3302,-3302
chr9:99144591-99145155	chr9	+	99144850	99145190	True	NM_007001,NM_014282	chr9,chr9	-,+	SLC35D2,HABP4	852,67223
chr8:120886888-120888732	chr8	+	120886936	120888535	True	NM_024094,NM_022783	chr8,chr8	-,+	DSCC1,DEPTOR	-18766,-1087
chr20:29969363-29970221	chr20	+	29969653	29970228	True	NM_153289,NM_173460,NM_054112,NM_153323	chr20,chr20,chr20,chr20	-,-,+,-	DEFB119,DEFB119,DEFB118,DEFB119	8234,8234,-13300,8234
chr10:135207130-135207474	chr10	+	135207341	135207466	True	NM_138384,NM_004092	chr10,chr10	+,-	MTG1,ECHS1	154,-20433
chr1:162333224-162335106	chr1	+	162333355	162334987	True	NM_001126060,NM_182581	chr1,chr1	+,-	NOS1AP,C1orf111	-633,11707
chr20:33542939-33543312	chr20	+	33542951	33543153	True	NM_000178,NM_020884	chr20,chr20	-,+	GSS,MYH7B	498,550
chr1:169335251-169336852	chr1	+	169335304	169336893	True	NM_003666,NM_013330,NM_197972	chr1,chr1,chr1	+,-,-	BLZF1,NME7,NME7	300,343,343
chr6:151189092-151189566	chr6	+	151189227	151189463	True	NM_020861,NM_015440	chr6,chr6	-,+	ZBTB2,MTHFD1L	523266,-2588
chr17:20517037-20517357	chr17	+	20517051	20517405	True	NM_001190790,NR_029393	chr17,chr17	+,-	CDRT15L2,KRT16P3	-34065,-109240
chr4:1108206-1108467	chr4	+	1108238	1108438	True	NM_001193318,NR_033768,NM_001131034,NM_021923,NM_194439	chr4,chr4,chr4,chr4,chr4	-,-,-,+,-	RNF212,TMED11P,RNF212,FGFRL1,RNF212	-886,8566,-886,-102042,-886
chr2:23700529-23701972	chr2	+	23700651	23701719	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	448265,-92404
chr1:27998709-28000502	chr1	+	27998933	28000193	True	NM_022872,NM_002038,NM_022873,NM_001143912	chr1,chr1,chr1,chr1	-,-,-,+	IFI6,IFI6,IFI6,FAM76A	-209,-209,-209,52296
chr21:48025153-48026495	chr21	+	48025367	48026472	True	NM_001535	chr21	+	PRMT2	29054
chr18:57361395-57363284	chr18	+	57361634	57363095	True	NM_133459,NM_021127	chr18,chr18	-,+	CCBE1,PMAIP1	1606,204096
chr12:7591765-7592057	chr13	-	20220725	20220813	False	NM_199254,NM_017520	chr13,chr13	-,+	TPTE2,MPHOSPH8	-109822,-12988
chr12:7591765-7592057	chr12	+	7591775	7592072	True	NM_174941,NM_001080454	chr12,chr12	-,+	CD163L1,ACSM4	4727,-134904
chr1:110024777-110026144	chr1	+	110024801	110025780	True	NM_020703,NM_153340	chr1,chr1	-,+	AMIGO1,ATXN7L2	26606,780
chr2:65455469-65456039	chr2	+	65455507	65455807	True	NM_001005386,NM_005722,NM_015543	chr2,chr2,chr2	+,+,-	ACTR2,ACTR2,RAB1A	-734,-734,-98072
chr16:48179658-48180284	chr16	+	48179674	48180252	True	NM_033226,NM_031490	chr16,chr16	-,+	ABCC12,LONP2	479,97958
chr10:75571749-75573633	chr10	+	75572207	75573581	True	NM_015037,NM_003635	chr10,chr10	+,-	KIAA0913,NDST2	-26653,-618
chr12:57876597-57877855	chr12	+	57876943	57877515	True	NM_032496,NM_004990,NM_001080157,NM_001080156	chr12,chr12,chr12,chr12	-,+,-,-	ARHGAP9,MARS,ARHGAP9,ARHGAP9	-3310,4220,-3519,-5215
chr15:80189680-80190496	chr15	+	80189759	80190513	True	NM_006441,NM_001199758,NR_028330,NR_037654	chr15,chr15,chr15,chr15	-,-,+,-	MTHFS,MTHFS,C15orf37,MTHFS	-368,-132,24599,-420
chr16:3306752-3307198	chr16	+	3306757	3307243	True	NR_033904,NM_001198536,NM_000243	chr16,chr16,chr16	+,-,-	FLJ39639,MEFV,MEFV	6524,-130,-130
chr16:31449104-31450308	chr16	+	31449305	31450153	True	NM_001136509,NM_001105247,NM_005205	chr16,chr16,chr16	-,+,-	ZNF843,ARMC5,COX6A2	4252,20163,-9556
chr12:56101925-56102220	chr12	+	56101935	56102269	True	NM_001144996,NM_001144997,NR_037656,NR_037658,NR_037655,NR_037657,NM_001487,NM_002206	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,-,+,+,+,+,+,-	ITGA7,ITGA7,BLOC1S1,BLOC1S1-RDH5,BLOC1S1,BLOC1S1,BLOC1S1,ITGA7	-249,3870,7806,7548,7548,7806,7548,-249
chr8:67578141-67578636	chr8	+	67578140	67578672	True	NM_019607,NM_001204173,NM_025054	chr8,chr8,chr8	+,+,-	C8orf44,C8orf44-SGK3,VCPIP1	1114,1114,830
chr13:29246797-29247248	chr13	+	29246912	29247015	True	NM_001135919,NM_015932	chr13,chr13	-,+	SLC46A3,POMP	46198,-13836
chr9:127625719-127625974	chr9	+	127625850	127626004	True	NM_007209,NM_030978	chr9,chr9	-,+	RPL35,ARPC5L	-1610,5479
chr12:57505777-57506151	chr12	+	57505807	57506106	True	NM_002332,NM_003153,NR_033659,NM_001178078,NM_001178080,NM_001178081,NM_001178079	chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,-,-,-,-,-,-	LRP1,STAT6,STAT6,STAT6,STAT6,STAT6,STAT6	16175,-611,-611,-611,-611,-611,-1718
chr7:87505586-87505870	chr7	+	87505625	87505857	True	NM_006716,NM_018843	chr7,chr7	+,-	DBF4,SLC25A40	-132,67
chr3:184042718-184043468	chr3	+	184042719	184043505	True	NM_004953,NM_001171087,NR_003055,NM_182917	chr3,chr3,chr3,chr3	+,-,+,+	EIF4G1,CLCN2,SNORD66,EIF4G1	-4669,35936,-22,-9818
chr16:81129234-81129451	chr16	+	81129242	81129428	True	NM_004483,NR_033249,NR_033247,NM_015251	chr16,chr16,chr16,chr16	-,-,-,+	GCSH,GCSH,LOC100329108,ATMIN	602,602,576,-59839
chr4:129190861-129192401	chr4	+	129190977	129192436	True	NM_006320,NM_018078	chr4,chr4	-,+	PGRMC2,LARP1B	17598,-208536
chr14:23757720-23759656	chr14	+	23757988	23759230	True	NM_004050,NM_020834	chr14,chr14	+,-	BCL2L2,HOMEZ	16740,-2679
chr6:55725598-55726117	chr6	+	55725597	55726163	True	NM_021073,NM_207410	chr6,chr6	-,+	BMP5,GFRAL	14262,-533383
chrX:15808245-15808492	chrX	+	15808287	15808511	True	NR_002725,NM_005089	chrX,chrX	-,+	INE2,ZRSR2	-2575,62
chr19:18060687-18061112	chr19	+	18060745	18061145	True	NM_002248,NM_000215	chr19,chr19	+,-	KCNN1,JAK3	965,-101904
chr10:100174837-100176441	chr10	+	100175306	100176196	True	NM_014472,NM_032709	chr10,chr10	+,-	C10orf28,PYROXD2	-280976,-328
chr7:26680175-26681012	chr7	+	26680249	26680972	True	NR_022006,NM_001145531	chr7,chr7	-,+	KIAA0087,C7orf71	-101805,-2810
chr7:128580317-128580677	chr7	+	128580417	128580701	True	NM_199349,NM_001098629,NM_032643,NM_001098627,NM_001098630	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	KCP,IRF5,IRF5,IRF5,IRF5	-29644,-2474,-2197,70,-2474
chr12:56622211-56622842	chr12	+	56622486	56622706	True	NM_005785,NM_173596,NM_194359,NM_194358,NM_001135195,NM_024068	chr12,chr12,chr12,chr12,chr12,chr12	-,+,-,-,+,+	RNF41,SLC39A5,RNF41,RNF41,SLC39A5,OBFC2B	-6782,1113,-6751,-6782,1794,-4412
chrX:2926309-2928168	chrX	+	2926324	2928101	True	NM_000047,NM_001011719	chrX,chrX	-,+	ARSE,ARSH	-43830,-1734
chr19:826491-827475	chr19	+	826507	827462	True	NM_001700,NM_024888	chr19,chr19	+,-	AZU1,LPPR3	368,-4555
chr17:18527725-18528081	chr17	+	18527907	18527980	True	NR_036647,NM_001037330	chr17,chr17	-,+	CCDC144B,TRIM16L	1001,97421
chr17:18527725-18528081	chr17	+	20798480	20798541	False	NM_001004306,NM_015510	chr17,chr17	-,+	CCDC144NL,DHRS7B	969,231716
chr17:18527725-18528081	chr17	-	16594488	16594561	False	NM_020787,NM_014695	chr17,chr17	-,+	ZNF624,CCDC144A	-37321,-901
chr15:77219413-77221179	chr15	+	77219874	77221171	True	NM_020843,NM_002902	chr15,chr15	-,+	SCAPER,RCN2	-43657,2790
chr9:91604329-91604989	chr9	+	91604524	91605012	True	NM_001001938,NM_016848,NM_001142413,NM_005226	chr9,chr9,chr9,chr9	+,-,+,+	C9orf47,SHC3,C9orf47,S1PR3	765,188720,765,1349
chr7:106809209-106809589	chr7	+	106809212	106809523	True	NM_012257,NM_006348	chr7,chr7	+,-	HBP1,COG5	-20,395486
chr7:19184568-19184878	chr7	+	19184575	19184681	True	NM_152898,NM_001204148	chr7,chr7	-,+	FERD3L,HDAC9	413,-635726
chr18:53635216-53635645	chr18	+	53635231	53635664	True	NM_003199,NM_015285	chr18,chr18	-,+	TCF4,WDR7	-379371,682951
chr1:169455574-169457066	chr1	+	169455573	169456862	True	NM_003666,NM_006996	chr1,chr1	+,-	BLZF1,SLC19A2	-118430,-365
chr21:44588149-44588703	chr21	+	44588190	44588682	True	NM_006758,NM_000394	chr21,chr21	-,+	U2AF1,CRYAA	-60502,458
chr16:1493115-1493341	chr16	+	1493256	1493320	True	NM_001143980,NM_016111	chr16,chr16	-,+	CCDC154,TELO2	1220,50031
chr18:56531626-56532046	chr18	+	56531631	56532089	True	NM_018181,NM_052947	chr18,chr18	+,-	ZNF532,ALPK2	-1621,-235442
chr6:27730426-27730692	chr6	+	27730433	27730735	True	NM_003509,NM_003519	chr6,chr6	+,-	HIST1H2AI,HIST1H2BL	45241,45024
chr3:10872632-10873545	chr3	+	10872779	10873573	True	NR_027102,NM_014229	chr3,chr3	-,+	LOC285370,SLC6A11	-66902,-14913
chr22:25432605-25433212	chr22	+	25432913	25433023	True	NM_001001663,NM_001145206	chr22,chr22	-,+	TMEM211,KIAA1671	-97599,-9027
chr9:79106749-79107370	chr9	+	79106883	79107415	True	NM_018339,NM_001097636	chr9,chr9	-,+	RFK,GCNT1	-97439,8133
chr2:96700208-96700461	chr2	+	96700314	96700496	True	NM_207328,NR_003698	chr2,chr2	-,+	GPAT2,LOC729234	281,-24066
chr2:96700208-96700461	chr2	-	96455580	96455762	False	NM_207328,NM_138800	chr2,chr2	-,+	GPAT2,TRIM43	245015,-197865
chr4:48898020-48899201	chr4	+	48898177	48899188	True	NM_001014446,NM_152398,NM_001168254	chr4,chr4,chr4	-,-,+	OCIAD2,OCIAD2,OCIAD1	9677,9677,-64919
chr17:6925858-6926332	chr17	+	6925897	6926135	True	NR_030178,NM_174893,NM_001142798,NM_001142799,NR_029712,NM_181844	chr17,chr17,chr17,chr17,chr17,chr17	-,+,+,+,-,+	MIR497,C17orf49,C17orf49,C17orf49,MIR195,BCL6B	-4556,-7892,-7892,-7892,-4877,233
chr1:223114508-223115282	chr1	+	223114508	223115187	True	NM_032890,NM_003268	chr1,chr1	+,-	DISP1,TLR5	-126134,201490
chr6:35463623-35463906	chr6	+	35463809	35463955	True	NM_007104,NM_003214	chr6,chr6	+,-	RPL10A,TEAD3	-27682,956
chr19:408088-408295	chr19	+	408118	408254	True	NM_001136263,NM_130760	chr19,chr19	-,+	C2CD4C,MADCAM1	966,88235
chr17:40997138-40997476	chr17	+	40997207	40997507	True	NM_001158,NM_003734,NM_009590,NM_003766	chr17,chr17,chr17,chr17	+,+,+,-	AOC2,AOC3,AOC2,BECN1	-649,5693,-649,-20897
chr4:2011403-2011757	chr4	+	2011427	2011774	True	NM_005663,NM_001168243	chr4,chr4	-,+	WHSC2,C4orf48	-468,31945
chr7:22379032-22380955	chr7	+	22379110	22380608	True	NM_012294,NM_000600	chr7,chr7	-,+	RAPGEF5,IL6	15975,386157
chr1:201949628-201950625	chr1	+	201949966	201950640	True	NM_020216,NM_012134	chr1,chr1	+,-	RNPEP,LMOD1	1125,-34250
chr16:18814208-18814471	chr16	+	18814212	18814520	True	NM_015161,NM_024847	chr16,chr16	-,+	ARL6IP1,TMC7	-1355,180735
chr1:25576883-25577354	chr1	+	25576903	25577171	True	NM_001127691,NM_020317	chr1,chr1	+,-	RHD,C1orf63	21809,-2918
chr4:148401385-148402207	chr4	+	148401389	148401941	True	NM_138364,NR_028596,NM_001957,NM_001166055	chr4,chr4,chr4,chr4	-,+,+,+	PRMT10,EDNRA,EDNRA,EDNRA	203389,127,127,127
chr11:26710867-26712127	chr11	+	26711072	26712089	True	NM_178498,NM_203371	chr11,chr11	-,+	SLC5A12,FIBIN	31543,303538
chr12:102414782-102415497	chr12	+	102415033	102415534	True	NM_017915,NM_016053	chr12,chr12	+,-	C12orf48,CCDC53	98421,40423
chr17:1663769-1664191	chr17	+	1663768	1663966	True	NM_002615,NR_028505	chr17,chr17	+,-	SERPINF1,C17orf91	1292,-44202
chr4:6769684-6769982	chr4	+	6769691	6769978	True	NM_001100590,NM_203462	chr4,chr4	+,-	KIAA0232,MRFAP1L1	14480,-58085
chr2:152220098-152220465	chr2	+	152220295	152220505	True	NM_007115,NM_004688	chr2,chr2	+,-	TNFAIP6,NMI	-6240,-73865
chr17:15688934-15689480	chr17	+	15689209	15689503	True	NM_006470,NR_002211	chr17,chr17	-,+	TRIM16,MEIS3P1	-103016,660
chr17:15688934-15689480	chr17	+	20491878	20492156	False	NM_001190790,NR_029393	chr17,chr17	+,-	CDRT15L2,KRT16P3	-8901,-84067
chr1:78719254-78720199	chr1	+	78719317	78720018	True	NR_027310,NM_003902	chr1,chr1	+,-	MGC27382,FUBP1	-24085,-274540
chr16:448135-448928	chr16	+	448241	448903	True	NM_005009,NM_021259,NM_020664	chr16,chr16,chr16	+,-,+	NME4,TMEM8A,DECR2	-1100,-16291,2954
chr8:1919234-1920449	chr8	+	1919239	1920445	True	NR_033895,NM_014867	chr8,chr8	-,+	LOC286083,KBTBD11	-668412,1598
chr6:155054503-155054783	chr6	+	155054518	155054596	True	NM_173515,NM_014892	chr6,chr6	-,+	CNKSR3,SCAF8	-222765,-57
chr1:109617324-109618599	chr1	+	109617476	109618479	True	NM_020141,NM_005645	chr1,chr1	+,-	TMEM167B,TAF13	14923,195
chrX:23801721-23801993	chrX	+	23801769	23801999	True	NM_001037171,NM_002970,NR_027783	chrX,chrX,chrX	-,+,+	ACOT9,SAT1,SAT1	-40362,-552,-552
chr18:43749059-43750161	chr18	+	43749237	43749867	True	NM_001008239,NM_145055,NM_001001937	chr18,chr18,chr18	+,+,-	C18orf25,C18orf25,ATP5A1	4120,4120,-65038
chr14:75643904-75644586	chr14	+	75643907	75644340	True	NM_006827,NM_005252	chr14,chr14	-,+	TMED10,FOS	-558,101140
chr11:128716703-128717628	chr11	+	128716772	128717566	True	NM_000890,NM_000220	chr11,chr11	+,-	KCNJ5,KCNJ1	43746,-4409
chr19:20369442-20371056	chr19	+	20369469	20370577	True	NM_052852,NR_036053	chr19,chr19	+,-	ZNF486,MIR1270-1	-91437,139646
chr17:35305845-35306260	chr17	+	35305854	35306230	True	NM_012138,NM_198837	chr17,chr17	+,-	AATF,ACACA	54,350512
chr1:112016363-112016633	chr1	+	112016468	112016650	True	NM_024102,NM_174896	chr1,chr1	-,+	WDR77,C1orf162	-24638,-16
chr20:23618858-23619531	chr20	+	23619380	23619580	True	NM_000099,NR_001279	chr20,chr20	-,+	CST3,CSTT	-806,-119648
chr4:183064639-183064950	chr4	+	183064675	183064995	True	NR_031640,NR_027107	chr4,chr4	+,-	MIR1305,MGC45800	25450,723
chr19:39788911-39789686	chr19	+	39789094	39789538	True	NM_172140,NM_020862	chr19,chr19	+,-	IL29,LRFN1	-2180,16488
chr22:21920182-21921543	chr22	+	21920889	21921456	True	NM_001128633,NR_028437,NM_003347,NR_028436	chr22,chr22,chr22,chr22	-,+,+,+	RIMBP3C,UBE2L3,UBE2L3,UBE2L3	-15139,500,500,500
chr3:185827861-185828096	chr3	+	185827875	185828012	True	NR_033752,NM_004454	chr3,chr3	+,-	LOC344887,ETV5	-141667,-974
chr16:680633-680875	chr16	+	680699	680920	True	NM_001040165,NM_001040160,NM_032366,NM_001040162,NM_053284,NM_001040161	chr16,chr16,chr16,chr16,chr16,chr16	-,-,-,-,+,-	C16orf13,C16orf13,C16orf13,C16orf13,WFIKKN1,C16orf13	5477,5477,5477,5477,91,5477
chr4:177170208-177170936	chr4	+	177170450	177170941	True	NM_021928,NM_080874	chr4,chr4	+,-	SPCS3,ASB5	70148,19482
chr12:25096281-25096638	chr12	+	25096454	25096647	True	NM_005504,NM_001204126,NM_001178091,NM_001178092	chr12,chr12,chr12,chr12	-,+,-,-	BCAT1,LRMP,BCAT1,BCAT1	5797,108533,5797,5797
chr5:25436596-25438263	chr5	+	25436726	25438279	True	NR_037896,NM_020227	chr5,chr5	-,+	LOC340107,PRDM9	-596034,-1929053
chr17:40307350-40307565	chr17	+	40307551	40307613	True	NM_004583,NM_201434,NM_033194	chr17,chr17,chr17	-,-,+	RAB5C,RAB5C,HSPB9	-529,-529,-32846
chr11:27075085-27076969	chr11	+	27075257	27076997	True	NM_003986,NM_030771	chr11,chr11	+,-	BBOX1,CCDC34	-12807,307848
chr12:49370544-49371668	chr12	+	49370751	49371647	True	NM_003394,NM_005430	chr12,chr12	-,+	WNT10B,WNT1	-5110,588
chr2:159824568-159824776	chr2	+	159824568	159824804	True	NM_152528,NM_001145909,NM_033394	chr2,chr2,chr2	-,+,+	WDSUB1,TANC1,TANC1	318309,341,341
chr4:152082410-152083323	chr4	+	152082415	152082660	True	NR_000007,NM_001128924	chr4,chr4	+,-	SNORD73A,SH3D19	-57487,14105
chr22:38200219-38200462	chr22	+	38200373	38200440	True	NM_138797,NM_014291,NM_005318,NM_001171690	chr22,chr22,chr22,chr22	-,+,+,+	ANKRD54,GCAT,H1F0,GCAT	39964,3471,673,3471
chr20:35169238-35169468	chr20	+	35169357	35169425	True	NM_181526,NM_032214,NM_006097	chr20,chr20,chr20	+,-,+	MYL9,SLA2,MYL9	471,105183,471
chr18:56883696-56885519	chr18	+	56883833	56885293	True	NM_013435,NM_001012512,NM_001012513,NM_002091	chr18,chr18,chr18,chr18	-,+,+,+	RAX,GRP,GRP,GRP	55382,2106,2106,2106
chr16:10778988-10779197	chr16	+	10779003	10779155	True	NM_002484,NM_144674	chr16,chr16	+,-	NUBP1,TEKT5	58542,9697
chr17:34899320-34899564	chr17	+	34899319	34899438	True	NM_001163735,NM_024835,NM_178517,NM_001033580,NM_025109	chr17,chr17,chr17,chr17,chr17	-,+,+,-,-	MYO19,GGNBP2,PIGW,MYO19,MYO19	-8014,1298,-7968,-8014,-8014
chr1:206317259-206318134	chr1	+	206317413	206318133	True	NM_001007544,NM_001910,NM_148964	chr1,chr1,chr1	-,+,+	C1orf186,CTSE,CTSE	-28766,-5,-5
chr19:40193060-40193567	chr19	+	40193059	40193413	True	NM_020129,NM_203471,NM_001828	chr19,chr19,chr19	+,+,-	LGALS14,LGALS14,CLC	1532,1532,35309
chr22:22853665-22854883	chr22	+	22853984	22854622	True	NR_027426,NM_080764	chr22,chr22	+,-	LOC648691,ZNF280B	47133,8935
chr19:46801302-46801640	chr19	+	46801309	46801689	True	NM_152796,NM_152795,NM_022462,NM_152794,NM_032040	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	HIF3A,HIF3A,HIF3A,HIF3A,CCDC8	-57,-1057,-57,5166,115280
chr10:102280422-102281909	chr10	+	102280600	102281942	True	NM_017902,NM_015490,NM_005004	chr10,chr10,chr10	+,-,-	HIF1AN,SEC31B,NDUFB8	13698,-1005,7749
chr13:50071582-50072480	chr13	+	50071736	50072489	True	NM_001079670,NM_001040444,NM_001040443	chr13,chr13,chr13	-,+,+	CAB39L,PHF11,PHF11	-53515,-1259,-1986
chr20:39968675-39969534	chr20	+	39968824	39969572	True	NM_052846,NM_022896	chr20,chr20	-,+	EMILIN3,LPIN3	25976,-13
chr13:42857694-42858263	chr13	+	42857750	42858118	True	NM_016248,NM_001009814	chr13,chr13	+,-	AKAP11,KIAA0564	-11512,-322529
chr17:1928951-1929166	chr17	+	1929000	1929090	True	NM_178568,NM_001383	chr17,chr17	-,+	RTN4RL1,DPH1	-822,4340
chr12:128077381-128078166	chr12	+	128077659	128078061	True	NR_033970,NR_033987	chr12,chr12	-,+	LOC440117,FLJ37505	-718423,288100
chr2:133013506-133013804	chr2	+	133013574	133013790	True	NR_031608,NM_001508,NR_027020	chr2,chr2,chr2	-,+,-	MIR663B,GPR39,ANKRD30BL	913,160356,1802
chr1:206941368-206942916	chr1	+	206941584	206942856	True	NM_153758,NM_000572	chr1,chr1	+,-	IL19,IL10	29358,3033
chr9:139011262-139011563	chr9	+	139011328	139011586	True	NM_015597,NM_152833	chr9,chr9	+,-	GPSM1,C9orf69	210345,-597
chr14:24109266-24109613	chr14	+	24109351	24109613	True	NM_032452,NM_005794,NM_182908	chr14,chr14,chr14	-,+,+	JPH4,DHRS2,DHRS2	-61342,-3829,-3829
chr12:120934817-120935223	chr12	+	120934947	120935240	True	NM_003769,NM_001037495,NM_003746	chr12,chr12,chr12	-,+,+	SRSF9,DYNLL1,DYNLL1	-27389,-1139,-1139
chr3:9882687-9883871	chr3	+	9882831	9883833	True	NR_037162,NM_173659,NM_001142547	chr3,chr3,chr3	+,-,-	TTLL3,RPUSD3,RPUSD3	-31251,1920,1920
chr8:22498481-22499845	chr8	+	22498560	22499687	True	NR_027715,NM_021174	chr8,chr8	-,+	FLJ14107,KIAA1967	86,-36072
chr6:2245928-2246195	chr6	+	2246072	2246178	True	NM_001500,NM_020135	chr6,chr6	-,+	GMDS,WRNIP1	-226,519487
chr6:14756307-14756842	chr6	+	14756311	14756649	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	489877,906690
chr19:4155047-4155446	chr19	+	4155119	4155213	True	NM_032607,NM_001193285	chr19,chr19	+,-	CREB3L3,SIRT6	-1541,27433
chr1:118481702-118483458	chr1	+	118481858	118483010	True	NM_001135589,NM_006784,NM_017686	chr1,chr1,chr1	-,+,-	GDAP2,WDR3,GDAP2	-9556,-9546,-9556
chr4:185940980-185941215	chr4	+	185940986	185941192	True	NM_001029887,NR_037510	chr4,chr4	+,-	HELT,MIR3945	-954,-168722
chr12:70008817-70009105	chr12	+	70008864	70008924	True	NM_201550,NM_001198842	chr12,chr12	-,+	LRRC10,CCT2	-3922,-29453
chr16:87637415-87637868	chr16	+	87637680	87637858	True	NM_020655,NM_015144	chr16,chr16	+,-	JPH3,ZCCHC14	-1232,-112220
chr1:32741631-32742266	chr1	+	32741632	32742254	True	NM_001042771,NR_026850	chr1,chr1	+,-	LCK,MTMR9LP	-1971,-34321
chrX:48269922-48270911	chrX	+	48269948	48270786	True	NM_175729,NM_001040612,NM_005636,NM_001034832	chrX,chrX,chrX,chrX	-,-,-,-	SSX4,SSX4B,SSX4,SSX4B	608,608,608,608
chrX:48269922-48270911	chrX	-	48243522	48244361	False	NM_175729,NM_175711,NM_001040612,NM_005636,NM_001034832	chrX,chrX,chrX,chrX,chrX	+,-,+,+,+	SSX4,SSX3,SSX4B,SSX4,SSX4B	-605,-27380,-605,-605,-605
chr16:25026904-25027650	chr16	+	25026904	25027585	True	NM_018054,NM_001006634,NM_001032391	chr16,chr16,chr16	-,-,+	ARHGAP17,ARHGAP17,LCMT1	-229,-229,95461
chr3:119300073-119301117	chr3	+	119300378	119301050	True	NM_005191,NM_001125	chr3,chr3	-,+	CD80,ADPRH	-21897,-1906
chr19:34856506-34856712	chr19	+	34856598	34856702	True	NR_027620,NM_001184722,NM_000175	chr19,chr19,chr19	-,+,+	LOC643719,GPI,GPI	211944,-1004,-617
chr9:80638765-80639199	chr9	+	80638871	80639217	True	NM_001098802,NM_002072	chr9,chr9	+,-	CEP78,GNAQ	211773,7052
chr4:71251912-71252881	chr4	+	71252266	71252916	True	NM_144646,NM_006685	chr4,chr4	-,+	IGJ,SMR3B	279484,-3529
chr8:92291946-92293527	chr8	+	92292537	92293556	True	NM_018710,NM_052832	chr8,chr8	-,+	TMEM55A,SLC26A7	-239334,-31073
chr14:51272305-51273404	chr14	+	51272329	51273362	True	NM_181533,NM_020921	chr14,chr14	+,-	ABHD12B,NIN	65515,24528
chr7:44037087-44038211	chr7	+	44037093	44037491	True	NM_175064,NR_003655	chr7,chr7	+,-	SPDYE1,POLR2J4	2997,21307
chr7:44037087-44038211	chr7	-	76691879	76692021	False	NM_006682,NR_028058	chr7,chr7	-,+	FGL2,LOC100132832	137179,-23133
chr7:44037087-44038211	chr7	+	102191270	102191320	False	NM_001031618,NM_001166339,NM_001097615	chr7,chr7,chr7	+,+,-	SPDYE2,SPDYE2L,POLR2J3	358,358,21798
chr7:44037087-44038211	chr7	+	102290363	102290413	False	NM_001031618,NM_001166339,NM_001114403	chr7,chr7,chr7	+,+,-	SPDYE2,SPDYE2L,UPK3BL	358,358,-7125
chr17:19266228-19266433	chr17	+	19266280	19266354	True	NM_015681,NM_139032	chr17,chr17	-,+	B9D1,MAPK7	-234,14679
chr22:37642499-37643026	chr22	+	37642697	37642955	True	NM_013385,NM_002872	chr22,chr22	+,-	CYTH4,RAC2	35539,-2392
chr7:132757224-132757521	chr7	+	132757224	132757326	True	NM_001037126,NM_017812	chr7,chr7	+,-	EXOC4,CHCHD3	180496,9552
chr19:50031094-50031376	chr19	+	50031096	50031320	True	NM_020650,NR_029703	chr19,chr19	+,-	RCN3,MIR150	-272,-26971
chr17:36247681-36248975	chr17	+	36248111	36248979	True	NM_032258,NR_024178	chr17,chr17	+,-	TBC1D3F,LOC284100	34980,-3748
chr13:21517471-21518098	chr13	+	21517637	21517943	True	NM_022459,NM_005870	chr13,chr13	-,+	XPO4,SAP18	-40724,196709
chr16:811465-811723	chr16	+	811528	811684	True	NM_005823,NR_030384,NM_001177355,NM_022493,NM_013404	chr16,chr16,chr16,chr16,chr16	+,+,+,-,+	MSLN,MIR662,MSLN,NARFL,MSLN	-814,8498,-813,-20531,-506
chr2:26534510-26534870	chr2	+	26534519	26534765	True	NM_001145168,NM_001145169,NM_033505	chr2,chr2,chr2	-,-,+	GPR113,GPR113,EPT1	7202,7255,34188
chr6:70444446-70446322	chr6	+	70444897	70446298	True	NM_018368,NM_001858	chr6,chr6	-,+	LMBRD1,COL19A1	60802,130149
chr16:30597312-30597621	chr16	+	30597337	30597467	True	NM_152458,NM_024031	chr16,chr16	-,+	ZNF785,PRR14	-245,64773
chr3:42815686-42816849	chr3	+	42815815	42816854	True	NM_001296,NM_144719	chr3,chr3	+,-	CCBP2,CCDC13	34109,-1070
chr17:78452361-78452969	chr17	+	78452534	78452992	True	NM_002522,NM_173627	chr17,chr17	-,+	NPTX1,FLJ35220	-2130,-63618
chr9:133538677-133538891	chr9	+	133538685	133538865	True	NR_027440,NM_021619	chr9,chr9	-,+	LOC100272217,PRDM12	-83804,1115
chr20:17536867-17538202	chr20	+	17537215	17538224	True	NM_001011546,NM_001161705	chr20,chr20	+,-	DSTN,BFSP1	12374,1431
chr12:57499430-57500811	chr12	+	57499649	57500785	True	NM_003153,NR_033659,NM_001178078,NM_005967,NM_001178079,NM_001178081,NM_001178080	chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,-,-,+,-,-,-	STAT6,STAT6,STAT6,NAB2,STAT6,STAT6,STAT6	4461,4461,4461,-17023,3354,4461,4461
chr1:161057425-161059142	chr1	+	161057567	161059019	True	NR_033386,NR_033385,NM_030916,NM_001007255,NM_152366	chr1,chr1,chr1,chr1,chr1	+,+,-,+,+	KLHDC9,KLHDC9,PVRL4,KLHDC9,KLHDC9	9131,9131,416,9161,9161
chrX:40795100-40796444	chrX	+	40795370	40796301	True	NR_027761,NM_001039590	chrX,chrX	-,+	LOC100132831,USP9X	-102921,148586
chr4:9534364-9534652	chr4	+	9534630	9534690	True	NR_031688,NM_001040448	chr4,chr4	-,+	MIR548I2,DEFB131	23297,-88421
chr18:21036203-21038162	chr18	+	21036798	21037823	True	NM_003831,NM_032933	chr18,chr18	+,-	RIOK3,C18orf45	-4073,-18873
chr9:134001148-134002026	chr9	+	134001436	134001833	True	NM_005085,NM_033387	chr9,chr9	+,-	NUP214,FAM78A	-506,150132
chr20:43030361-43031303	chr20	+	43030548	43031192	True	NM_178850,NR_037419,NM_000457,NM_001080472,NM_178849	chr20,chr20,chr20,chr20,chr20	+,+,+,-,+	HNF4A,MIR3646,HNF4A,FITM2,HNF4A	-675,5567,-675,-90659,-675
chr17:80691950-80692480	chr17	+	80692048	80692328	True	NM_022158,NM_006822	chr17,chr17	+,-	FN3K,RAB40B	1123,-35450
chr11:73668517-73668755	chr11	+	73668521	73668803	True	NM_153614,NM_003355	chr11,chr11	+,-	DNAJB13,UCP2	-7208,25136
chr6:41607607-41607866	chr6	+	41607685	41607881	True	NM_005586,NM_007162	chr6,chr6	+,-	MDFI,TFEB	-1541,94967
chr1:175043503-175043725	chr1	+	175043643	175043741	True	NR_037606,NM_022093	chr1,chr1	-,+	MRPS14,TNN	-51052,-6700
chr22:39016668-39017061	chr22	+	39016830	39017045	True	NM_001002880,NM_001013647	chr22,chr22	+,-	CBY1,LOC646851	35612,35642
chr5:37229375-37230200	chr5	+	37229743	37229940	True	NM_018034,NM_023073	chr5,chr5	+,-	WDR70,C5orf42	149471,19647
chrX:110214483-110215651	chrX	+	110214482	110215480	True	NM_001128167,NM_001143983	chrX,chrX	+,-	PAK3,CHRDL1	-27023,-175196
chr9:84606357-84607749	chr9	+	84606404	84607778	True	NM_005077,NM_001001670	chr9,chr9	-,+	TLE1,FAM75D1	-302808,-2769
chr2:198053568-198054510	chr2	+	198053654	198054464	True	NM_001195144,NM_025147	chr2,chr2	-,+	ANKRD44,COQ10B	121107,263766
chr12:27491761-27492648	chr12	+	27491770	27492456	True	NM_001080406,NM_020183	chr12,chr12	-,+	C12orf71,ARNTL2	-256315,-5833
chr20:61924070-61924421	chr20	+	61924069	61924329	True	NM_152864,NR_036220,NM_020882	chr20,chr20,chr20	-,+,+	NKAIN4,MIR4326,COL20A1	-38177,-5960,208
chr9:135855226-135856373	chr9	+	135855238	135855983	True	NM_001135031,NM_001162427,NM_004188	chr9,chr9,chr9	+,-,+	GFI1B,TSC1,GFI1B	-1192,-35218,-1192
chr1:38454858-38455114	chr1	+	38455034	38455162	True	NM_016037,NM_006802	chr1,chr1	+,-	UTP11L,SF3A3	23221,649
chr2:26383863-26384792	chr2	+	26383862	26384758	True	NM_000182,NM_001168241	chr2,chr2	-,+	HADHA,FAM59B	82886,11201
chr18:10527107-10528037	chr18	+	10527397	10527877	True	NM_003826,NM_022068	chr18,chr18	+,-	NAPG,FAM38B	-1575,620934
chr3:31571630-31573354	chr3	+	31572096	31573339	True	NM_178862,NM_001174060	chr3,chr3	+,-	STT3B,OSBPL10	1151,450054
chr9:131790930-131791293	chr9	+	131790957	131791134	True	NM_020145,NM_032809	chr9,chr9	-,+	SH3GLB2,FAM73B	-378,8118
chr20:524447-525289	chr20	+	524514	525326	True	NM_031229,NM_177560,NM_001895,NM_177559	chr20,chr20,chr20,chr20	+,-,-,-	RBCK1,CSNK2A1,CSNK2A1,CSNK2A1	-135856,-32,-32,-32
chr1:211515037-211516885	chr1	+	211515182	211516659	True	NM_001164688,NM_145759	chr1,chr1	-,+	RD3,TRAF5	149650,3046
chr7:156800913-156801524	chr7	+	156800953	156801477	True	NM_005515,NM_138400,NM_001165255	chr7,chr7,chr7	-,+,-	MNX1,NOM1,MNX1	1920,-58587,702
chr4:56729225-56730505	chr4	+	56729434	56730544	True	NM_178237,NM_006681,NM_001024924,NM_018261	chr4,chr4,chr4,chr4	+,-,+,+	EXOC1,NMU,EXOC1,EXOC1	-9682,-226969,-9682,-9682
chr3:93715638-93716754	chr3	+	93715646	93716521	True	NM_000313,NR_033427	chr3,chr3	-,+	PROS1,ARL13B	-22712,-16714
chr3:79801550-79802074	chr3	+	79801606	79802088	True	NM_001128929,NM_002941	chr3,chr3	+,-	ROBO2,ROBO1	-2654496,15023
chr13:52702828-52703128	chr13	+	52702939	52703145	True	NM_199289,NM_021645	chr13,chr13	-,+	NEK5,UTP14C	119,-104163
chr1:156719800-156720638	chr1	+	156719799	156720685	True	NM_001126051,NM_145729,NM_005973,NM_004494,NM_001126050,NM_024540	chr1,chr1,chr1,chr1,chr1,chr1	-,-,+,-,-,-	HDGF,MRPL24,PRCC,HDGF,HDGF,MRPL24	1389,-8876,16588,908,1605,-8876
chr3:151986555-151986930	chr3	+	151986562	151986958	True	NR_027038,NM_207292,NR_027037,NM_021038	chr3,chr3,chr3,chr3	-,+,-,+	LOC401093,MBNL1,LOC401093,MBNL1	507,-784,507,-784
chr14:101360203-101360706	chr14	+	101360215	101360755	True	NR_030173,NR_029699,NR_024149,NM_001134888	chr14,chr14,chr14,chr14	+,+,+,-	MIR432,MIR136,MEG8,RTL1	-9446,-9227,351,-9031
chr3:63801725-63802607	chr3	+	63801872	63802403	True	NR_026866,NM_025075	chr3,chr3	+,-	C3orf49,THOC7	2637,47244
chr6:34855052-34855497	chr6	+	34855051	34855497	True	NM_005643,NM_015245	chr6,chr6	-,+	TAF11,ANKS1A	372,1540
chr10:70746264-70747999	chr10	+	70746364	70747635	True	NM_001057,NM_015634	chr10,chr10	-,+	TACR2,KIAA1279	429095,841
chr9:10613283-10614393	chr9	+	10613308	10614297	True	NM_000550,NM_002839	chr9,chr9	+,-	TYRP1,PTPRD	2079088,-585
chr22:21621723-21621944	chr22	+	21621928	21621992	True	NR_024583,NR_002829	chr22,chr22	+,-	POM121L8P,P2RX6P	14721,-223390
chr22:21621723-21621944	chr22	+	18820687	18820751	False	NM_005675,NR_003267	chr22,chr22	+,-	DGCR6,GGT3P	72984,-41213
chr22:21621723-21621944	chr22	-	21497117	21497181	False	NR_037566,NR_002829	chr22,chr22	+,-	BCRP2,P2RX6P	-39863,-98579
chr6:7911893-7913864	chr6	+	7911992	7913890	True	NR_027712,NM_001145549,NM_030810	chr6,chr6,chr6	+,-,-	PIP5K1P1,TXNDC5,TXNDC5	72444,-1682,-945
chr7:5086491-5086749	chr7	+	5086495	5086567	True	NM_001204513,NM_021163,NM_001204456,NM_198403	chr7,chr7,chr7,chr7	+,+,+,-	RBAK-LOC389458,RBAK,RBAK,MMD2	-1094,-993,-1094,-87651
chr7:5086491-5086749	chr7	+	6770375	6770447	False	NR_002217,NM_016265	chr7,chr7	+,-	PMS2CL,ZNF12	4488,-23809
chr17:61680008-61680365	chr17	+	61680159	61680326	True	NM_016360,NM_030576	chr17,chr17	+,-	TACO1,LIMD2	-1986,97248
chr19:53635188-53635660	chr19	+	53635295	53635481	True	NM_001164309,NR_028343,NM_001191055,NM_018355,NM_001136038	chr19,chr19,chr19,chr19,chr19	-,-,+,-,-	ZNF415,ZNF415,HERV-V2,ZNF415,ZNF415	740,742,-87363,714,740
chr4:85907524-85908460	chr4	+	85907566	85908084	True	NM_014991,NR_015359	chr4,chr4	-,+	WDFY3,NCRNA00247	-20022,-19659
chr14:24676132-24677937	chr14	+	24676513	24677777	True	NM_174944,NM_001199821,NM_001199822,NM_014169,NM_001184739,NM_138476	chr14,chr14,chr14,chr14,chr14,chr14	+,-,-,-,+,-	TSSK4,MDP1,MDP1,CHMP4A,TSSK4,MDP1	-1638,7551,7551,5311,-1638,7551
chr8:143834127-143834537	chr8	+	143834392	143834574	True	NM_016647,NM_205545	chr8,chr8	+,-	C8orf55,LYPD2	-25822,-440
chr2:224808522-224808959	chr2	+	224808526	224808908	True	NM_020830,NM_022915	chr2,chr2	-,+	WDFY1,MRPL44	1194,13212
chr4:9534913-9535319	chr4	+	9535148	9535268	True	NR_031688,NM_001040448	chr4,chr4	-,+	MIR548I2,DEFB131	22719,-88951
chr3:52231753-52231999	chr3	+	52231772	52231986	True	NM_017442,NM_199166,NM_000688	chr3,chr3,chr3	-,+,+	TLR9,ALAS1,ALAS1	28243,129,157
chr2:170361392-170361673	chr2	+	170361428	170361528	True	NM_006063,NM_024622	chr2,chr2	+,-	KBTBD10,FASTKD1	4683,68946
chr2:170361392-170361673	chr14	-	31922488	31922550	False	NM_080664,NM_025152	chr14,chr14	-,+	C14orf126,NUBPL	4180,108040
chr8:79717098-79718461	chr8	+	79717377	79718409	True	NM_001199886,NM_001199887,NM_016010,NM_000880,NM_001199888	chr8,chr8,chr8,chr8,chr8	-,-,+,-,-	IL7,IL7,FAM164A,IL7,IL7	21,21,-139146,21,21
chr19:49839532-49840355	chr19	+	49839818	49840332	True	NM_001040031,NM_014037,NM_001774	chr19,chr19,chr19	+,-,+	CD37,SLC6A16,CD37	-1198,-11344,-1198
chr9:132382704-132382906	chr9	+	132382745	132382805	True	NM_199350,NM_014064	chr9,chr9	-,+	C9orf50,METTL11A	300,5629
chr19:37198774-37200498	chr19	+	37199303	37200277	True	NM_152603,NM_153257	chr19,chr19	+,-	ZNF567,ZNF461	-19055,-41564
chr19:53029384-53029616	chr19	+	53029505	53029641	True	NM_001039886,NM_001105549	chr19,chr19	+,-	ZNF808,ZNF83	1267,112053
chr13:42622150-42622697	chr13	+	42622312	42622712	True	NM_178009,NM_001204504,NM_152910,NM_001009814	chr13,chr13,chr13,chr13	+,+,+,-	DGKH,DGKH,DGKH,KIAA0564	130,-8191,130,-87091
chr1:120055121-120056531	chr1	+	120055252	120056463	True	NM_000862,NR_036540	chr1,chr1	+,-	HSD3B1,LOC644242	-5477,85502
chr11:89399410-89400531	chr11	+	89399750	89400523	True	NM_153696,NM_001143837	chr11,chr11	+,-	FOLH1B,NOX4	-7344,-76971
chr11:89399410-89400531	chr11	-	49200121	49200213	False	NM_001014986,NR_027044	chr11,chr11	-,+	FOLH1,LOC440040	30101,379866
chr6:130509087-130509783	chr6	+	130509088	130509812	True	NM_032438,NM_152552	chr6,chr6	+,-	L3MBTL3,SAMD3	-169423,26732
chr13:25155157-25155804	chr13	+	25155788	25155853	True	NM_006437,NR_002815	chr13,chr13	-,+	PARP4,LOC374491	-68840,-1498
chr7:63596477-63596973	chr7	+	63596524	63596892	True	NM_001159524,NM_178558	chr7,chr7	+,-	ZNF735,ZNF680	70688,426665
chr16:3211230-3211479	chr16	+	3211266	3211448	True	NR_024167,NM_001134655	chr16,chr16	-,+	MGC3771,ZNF213	-45667,-26183
chr11:108536193-108537129	chr11	+	108536263	108536934	True	NM_015065,NM_004398	chr11,chr11	-,+	EXPH5,DDX10	-71889,-499
chr6:167654702-167654946	chr6	+	167654708	167654946	True	NM_005299,NM_001143947	chr6,chr6	-,+	GPR31,UNC93A	-83389,49856
chr3:50357818-50358411	chr3	+	50357986	50358438	True	NM_007275,NM_007022,NM_033158,NM_153281,NM_003773	chr3,chr3,chr3,chr3,chr3	-,+,-,-,-	TUSC2,CYB561D2,HYAL2,HYAL1,HYAL2	7280,29858,1893,-8174,1893
chr17:46970789-46971324	chr17	+	46970835	46971323	True	NM_005175,NM_001002027,NM_007241	chr17,chr17,chr17	+,+,-	ATP5G1,ATP5G1,SNF8	-738,-738,50881
chr1:203595143-203596188	chr1	+	203595150	203595999	True	NM_002023,NM_001684,NM_001001396	chr1,chr1,chr1	-,+,+	FMOD,ATP2B4,ATP2B4	-274861,64,64
chr10:116417833-116419252	chr10	+	116418096	116418956	True	NM_020940,NM_002313	chr10,chr10	+,-	FAM160B1,ABLIM1	162546,-38
chr1:236959896-236960897	chr1	+	236959895	236960919	True	NM_018072,NM_000254	chr1,chr1	-,+	HEATR1,MTR	-192054,-1368
chr16:2067260-2067483	chr16	+	2067265	2067327	True	NM_001130012,NM_178167,NM_001099456,NM_004785	chr16,chr16,chr16,chr16	+,-,+,+	SLC9A3R2,ZNF598,NPW,SLC9A3R2	9560,-7502,2193,9560
chr4:152641052-152642312	chr4	+	152641123	152642028	True	NM_004564,NM_001109977	chr4,chr4	-,+	PET112L,FAM160A1	40197,-310776
chr18:18692370-18693643	chr18	+	18692482	18693546	True	NM_005406,NM_001142966	chr18,chr18	-,+	ROCK1,GREB1L	-670,128656
chr22:44708706-44709092	chr22	+	44708736	44709140	True	NM_001099294,NM_001137606	chr22,chr22	-,+	KIAA1644,PARVG	-5,-131533
chr7:137523657-137525099	chr7	+	137523750	137524916	True	NM_004717,NM_001190906	chr7,chr7	-,+	DGKI,AKR1D1	6743,236261
chr6:117805048-117805761	chr6	+	117805059	117805493	True	NM_173674,NM_002944	chr6,chr6	+,-	DCBLD1,ROS1	-1291,-58041
chr14:50987141-50987832	chr14	+	50987224	50987878	True	NM_001127713,NM_006575	chr14,chr14	+,-	ATL1,MAP4K5	11921,11548
chr4:817483-818098	chr4	+	817545	817971	True	NM_032326,NM_006651	chr4,chr4	+,-	TMEM175,CPLX1	108290,2024
chr19:29410948-29412179	chr19	+	29411409	29412160	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	43877,292027
chrX:101410812-101411328	chrX	+	101410903	101411335	True	NM_001012978,NM_001159560,NM_080390	chrX,chrX,chrX	-,-,+	BEX5,BEX5,TCEAL2	3,-141,-30294
chr1:4713280-4713653	chr1	+	4713284	4713702	True	NM_018836,NM_001042478,NM_207356	chr1,chr1,chr1	+,+,-	AJAP1,AJAP1,C1orf174	1402,1402,-896427
chr14:96002523-96003038	chr14	+	96002549	96003079	True	NM_016417,NR_003002,NR_003138,NR_001459	chr14,chr14,chr14,chr14	+,-,-,-	GLRX5,SCARNA13,SNHG10,SNHG10	-1277,-2583,-1340,-1340
chr11:65153560-65154000	chr11	+	65153559	65154017	True	NM_031904,NM_182556,NM_001077241	chr11,chr11,chr11	+,-,-	FRMD8,SLC25A45,SLC25A45	23,-3417,-3417
chr1:100195157-100196143	chr1	+	100195183	100195974	True	NR_037516,NR_030382	chr1,chr1	+,-	MIR548AA1,MIR548D1	-40623,-16670
chr11:7052638-7053139	chr11	+	7052655	7053161	True	NM_013249,NM_176822	chr11,chr11	-,+	ZNF214,NLRP14	-11069,-11006
chr16:85340065-85340437	chr16	+	85340086	85340451	True	NR_033984,NM_198491	chr16,chr16	+,-	LOC400548,FAM92B	-169381,-193972
chr12:120933159-120933397	chr12	+	120933222	120933434	True	NM_003769,NM_001037495,NM_003746	chr12,chr12,chr12	-,+,+	SRSF9,DYNLL1,DYNLL1	-25664,424,424
chr1:32643899-32644954	chr1	+	32643983	32644972	True	NM_175852,NM_019118	chr1,chr1	+,-	TXLNA,TMEM234	372,43004
chr17:39992618-39992929	chr17	+	39992633	39992793	True	NM_052935,NR_033464,NR_033465,NM_152467	chr17,chr17,chr17,chr17	-,-,-,+	NT5C3L,NT5C3L,NT5C3L,KLHL10	-110,-145,-110,1249
chr6:33283291-33283847	chr6_qbl_hap6	+	4515631	4516073	False	NM_001145338,NM_001350,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	1943,7019,7019,-26027,1736,-1221,-1221,-1221,7019
chr6:33283291-33283847	chr6_mcf_hap5	+	4757127	4757569	False	NM_001145338,NM_001350,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	1943,7016,7016,-26022,1736,-1221,-1221,-1221,7016
chr6:33283291-33283847	chr6_cox_hap2	+	4727197	4727639	False	NM_001145338,NM_001350,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	1945,7022,7022,-26022,1738,-1221,-1221,-1221,7022
chr6:33283291-33283847	chr6	+	33283385	33283827	True	NM_001145338,NM_001350,NR_024517,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	1942,7016,7016,7016,-26024,1735,-1221,-1221,-1221,7016
chr6:33283291-33283847	chr6_dbb_hap3	+	4564708	4565150	False	NM_001145338,NM_001350,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	1943,7020,7020,-26021,1736,-1221,-1221,-1221,7020
chr8:42065739-42065966	chr8	+	42065795	42066016	True	NM_006803,NM_033011,NM_000930	chr8,chr8,chr8	+,-,-	AP3M2,PLAT,PLAT	-55382,-601,-601
chr2:231077313-231078458	chr2	+	231077324	231078480	True	NM_004510,NM_004509,NM_080424,NM_001005176	chr2,chr2,chr2,chr2	-,-,-,+	SP110,SP110,SP110,SP140	6397,6397,6397,11964
chr1:11156298-11157121	chr1	+	11156814	11156888	True	NM_007375,NM_002685,NM_001001998	chr1,chr1,chr1	+,-,-	TARDBP,EXOSC10,EXOSC10	-84186,3100,3100
chr20:30193984-30194435	chr20	+	30193993	30194475	True	NM_181353,NR_036161,NM_001191,NM_002165	chr20,chr20,chr20,chr20	+,+,-,+	ID1,MIR3193,BCL2L1,ID1	-952,513,116231,-952
chr19:39694615-39695009	chr19	+	39694757	39695057	True	NM_001080468,NM_001001414	chr19,chr19	-,+	SYCN,NCCRP1	-19,-7204
chr10:71928270-71929662	chr10	+	71928520	71929695	True	NM_001142648,NM_018649,NM_020150	chr10,chr10,chr10	-,+,-	SAR1A,H2AFY2,SAR1A	640,-116217,640
chr15:49464961-49466226	chr15	+	49464966	49466280	True	NM_004236,NM_002044	chr15,chr15	-,+	COPS2,GALK2	-17112,-2605
chr1:16082878-16083177	chr1	+	16082917	16083153	True	NM_001024215,NM_001024216,NM_001089591,NM_017556	chr1,chr1,chr1,chr1	+,+,-,+	FBLIM1,FBLIM1,UQCRHL,FBLIM1	7840,8305,51091,2101
chrX:72097277-72097589	chrX	+	72097284	72097614	True	NM_001080851,NM_033053	chrX,chrX	-,-	DMRTC1B,DMRTC1	-1662,-1662
chrX:72097277-72097589	chrX	-	72062883	72063213	False	NM_001080851,NM_033053	chrX,chrX	+,+	DMRTC1B,DMRTC1	1662,1662
chr2:171787085-171788591	chr2	+	171787084	171788314	True	NM_015530,NM_001136555,NM_001201428	chr2,chr2,chr2	+,-,+	GORASP2,TLK1,GORASP2	-2101,135228,-2189
chr4:698510-699214	chr4	+	698593	699124	True	NM_006315,NM_032219	chr4,chr4	+,-	PCGF3,MFSD7	448,-15620
chr16:2731929-2732377	chr16	+	2732123	2732241	True	NM_031948,NM_018992	chr16,chr16	-,+	PRSS27,KCTD5	38361,253
chr7:66768212-66769038	chr7	+	66768674	66768934	True	NM_022906,NR_022007	chr7,chr7	+,-	STAG3L4,PMS2P4	-1122,-1268
chr7:66768212-66769038	chr7	-	101974438	101974502	False	NR_036245,NM_001146210	chr7,chr7	+,-	MIR4285,SPDYE6	-38134,22451
chr8:89314789-89315409	chr8	+	89314936	89315406	True	NM_005941,NM_173538	chr8,chr8	-,+	MMP16,CNBD1	24361,-1436312
chr17:25414575-25416032	chr17	+	25414789	25415651	True	NM_015626,NM_000625	chr17,chr17	+,-	WSB1,NOS2	205454,711956
chr5:58857680-58858804	chr5	+	58857830	58858851	True	NM_006203,NR_024617	chr5,chr5	-,+	PDE4D,PART1	23531,924688
chr3:113955387-113955992	chr3	+	113955476	113955878	True	NM_007136,NM_173799	chr3,chr3	-,+	ZNF80,TIGIT	597,56954
chr17:8069942-8070372	chr17	+	8070006	8070388	True	NM_032354,NR_037447,NM_183065,NM_014232	chr17,chr17,chr17,chr17	-,+,-,-	TMEM107,MIR3676,TMEM107,VAMP2	9376,20104,9376,-3713
chr11:118117039-118118482	chr11	+	118117069	118118297	True	NM_198275,NM_000733	chr11,chr11	-,+	MPZL3,CD3E	4778,56997
chr15:75158807-75159228	chr15	+	75158971	75159131	True	NM_005697,NM_002435	chr15,chr15	-,+	SCAMP2,MPI	6589,23278
chr3:49139665-49141112	chr3	+	49139735	49141040	True	NM_173546,NM_005051,NM_017730,NM_198880	chr3,chr3,chr3,chr3	+,-,-,-	KLHDC8B,QARS,QRICH1,QRICH1	67977,1181,-8231,-8231
chr1:227062214-227062828	chr1	+	227062248	227062790	True	NM_002221,NM_012486,NM_000447	chr1,chr1,chr1	-,+,+	ITPKB,PSEN2,PSEN2	-135372,-4026,-4026
chr16:56762390-56763838	chr16	+	56762550	56763868	True	NM_005950,NM_014669	chr16,chr16	-,+	MT1G,NUP93	-60573,148
chr7:27189213-27189814	chr7	+	27189235	27189782	True	NR_002795,NM_024014,NM_006896,NM_019102	chr7,chr7,chr7,chr7	+,-,-,-	HOXA11-AS1,HOXA6,HOXA7,HOXA5	35244,-1867,6577,-5948
chrX:129246318-129246696	chrX	+	129246321	129246451	True	NM_001127197,NM_001421,NM_004794	chrX,chrX,chrX	-,-,+	ELF4,ELF4,RAB33A	-1633,-1846,59321
chr17:48504358-48505642	chr17	+	48504504	48505368	True	NM_025149,NM_018509	chr17,chr17	+,-	ACSF2,LRRC59	-1036,-29590
chr22:38667593-38668533	chr22	+	38667614	38668574	True	NM_012264,NM_001195072,NM_001195071,NM_001161573	chr22,chr22,chr22,chr22	-,-,-,+	TMEM184B,TMEM184B,TMEM184B,MAFF	516,516,146,-68646
chr9:2717619-2717848	chr9	+	2717703	2717833	True	NM_133497,NR_015375	chr9,chr9	+,-	KCNV2,FLJ35024	-228,-95330
chr8:30866864-30867580	chr8	+	30867007	30867433	True	NM_013357,NM_000553	chr8,chr8	-,+	PURG,WRN	22942,23344
chr8:22439040-22439317	chr8	+	22439096	22439354	True	NR_027715,NM_198042,NM_176871,NM_021630	chr8,chr8,chr8,chr8	-,+,+,+	FLJ14107,PDLIM2,PDLIM2,PDLIM2	60418,-1160,-1160,-2893
chr9:139743276-139743601	chr9	+	139743291	139743556	True	NM_003792,NM_206920,NM_014172,NM_001080482,NM_001135861	chr9,chr9,chr9,chr9,chr9	-,+,+,+,+	EDF1,MAMDC4,PHPT1,C9orf172,PHPT1	17232,3262,-86,-4475,-86
chr19:58037808-58038631	chr19	+	58038088	58038616	True	NM_001199295,NM_001039654,NM_153263	chr19,chr19,chr19	+,-,+	ZNF549,ZNF550,ZNF549	76,29159,76
chr5:147205666-147206887	chr5	+	147205772	147206380	True	NM_003122,NM_054023	chr5,chr5	-,+	SPINK1,SCGB3A2	4940,51893
chr17:39996751-39997087	chr17	+	39996939	39997070	True	NM_052935,NR_033464,NR_033465,NM_152467	chr17,chr17,chr17,chr17	-,-,-,+	NT5C3L,NT5C3L,NT5C3L,KLHL10	-4416,-4451,-4416,-2955
chr7:140825335-140825551	chr7	+	140825510	140825604	True	NM_053035,NM_001195278	chr7,chr7	-,+	MRPS33,LOC100131199	-110729,-51532
chr8:25038798-25040104	chr8	+	25038960	25039969	True	NM_024940,NM_006158	chr8,chr8	+,-	DOCK5,NEFL	2317,-224829
chr8:86272979-86273693	chr8	+	86272986	86273583	True	NM_005181,NM_001128829	chr8,chr8	+,-	CA3,CA1	77472,16818
chr19:45279842-45280107	chr19	+	45279900	45280156	True	NM_012116,NR_027754,NM_001130852	chr19,chr19,chr19	+,-,+	CBLC,CEACAM22P,CBLC	969,-219750,969
chr10:16563460-16563699	chr10	+	16563492	16563560	True	NM_001010908,NM_030664	chr10,chr10	-,+	C1QL3,PTER	494,-84576
chr11:117185698-117186113	chr11	+	117185737	117186033	True	NM_014956,NM_138973,NM_012104,NM_138971,NM_138972	chr11,chr11,chr11,chr11,chr11	+,-,-,-,-	CEP164,BACE1,BACE1,BACE1,BACE1	12537,989,989,989,989
chr13:57728145-57728383	chr13	+	57728153	57728419	True	NM_001130407,NM_001130406,NM_001130405,NM_001130404,NM_198441,NR_031628	chr13,chr13,chr13,chr13,chr13,chr13	+,+,+,+,+,-	PRR20E,PRR20D,PRR20C,PRR20B,PRR20A,MIR1297	-9,-9,-9,-9,-9,-2841970
chr13:57728145-57728383	chr13	+	57734724	57734990	False	NM_001130407,NM_001130406,NM_001130405,NM_001130404,NM_198441,NR_031628	chr13,chr13,chr13,chr13,chr13,chr13	+,+,+,+,+,-	PRR20E,PRR20D,PRR20C,PRR20B,PRR20A,MIR1297	-9,-9,-9,-9,-9,-2848541
chr13:57728145-57728383	chr13	+	57741289	57741555	False	NM_001130407,NM_001130406,NM_001130405,NM_001130404,NM_198441,NM_030932	chr13,chr13,chr13,chr13,chr13,chr13	+,+,+,+,+,-	PRR20E,PRR20D,PRR20C,PRR20B,PRR20A,DIAPH3	-9,-9,-9,-9,-9,2845838
chr13:57728145-57728383	chr13	+	57715010	57715276	False	NM_001130407,NM_001130406,NM_001130405,NM_001130404,NM_198441,NR_031628	chr13,chr13,chr13,chr13,chr13,chr13	+,+,+,+,+,-	PRR20E,PRR20D,PRR20C,PRR20B,PRR20A,MIR1297	-9,-9,-9,-9,-9,-2828827
chr13:57728145-57728383	chr13	+	57721580	57721846	False	NM_001130407,NM_001130406,NM_001130405,NM_001130404,NM_198441,NR_031628	chr13,chr13,chr13,chr13,chr13,chr13	+,+,+,+,+,-	PRR20E,PRR20D,PRR20C,PRR20B,PRR20A,MIR1297	-9,-9,-9,-9,-9,-2835397
chr8:22551460-22551685	chr8	+	22551483	22551656	True	NM_021174,NM_001199880,NM_004430,NM_001199881	chr8,chr8,chr8,chr8	+,-,-,-	KIAA1967,EGR3,EGR3,EGR3	-88995,-1581,-668,-1390
chr19:57924538-57925516	chr19	+	57924704	57925319	True	NM_020633,NM_006959	chr19,chr19	-,+	VN1R1,ZNF17	42845,-2240
chr8:86376840-86377081	chr8	+	86376847	86377033	True	NM_001738,NM_000067	chr8,chr8	-,+	CA1,CA2	-86505,-768
chr2:27256074-27256283	chr2	+	27256081	27256271	True	NM_001083590,NM_017727,NM_001134693	chr2,chr2,chr2	+,+,-	TMEM214,TMEM214,OST4	-358,-358,38346
chr1:43834219-43834890	chr1	+	43834225	43834825	True	NM_022821,NM_001255	chr1,chr1	-,+	ELOVL1,CDC20	-526,-9650
chr3:123302209-123303047	chr3	+	123302294	123303076	True	NM_198402,NM_012430	chr3,chr3	-,+	PTPLB,SEC22A	898,-381584
chrX:105860549-105861103	chrX	+	105860681	105861130	True	NM_001184782,NM_018015,NM_001171706	chrX,chrX,chrX	+,+,-	CXorf57,CXorf57,RIPPLY1	-5585,-5585,285488
chr19:36034600-36035465	chr19	+	36034777	36035411	True	NM_032635,NM_198538	chr19,chr19	+,-	TMEM147,SBSN	1133,-15524
chr8:57895580-57896879	chr8	+	57896116	57896897	True	NR_026772,NM_017813	chr8,chr8	+,-	C8orf71,IMPAD1	295204,9587
chr19:11405240-11406112	chr19	+	11405378	11406160	True	NM_020812,NM_012466	chr19,chr19	-,+	DOCK6,TSPAN16	-32221,663
chr12:121454180-121455139	chr12	+	121454296	121454782	True	NM_022895,NM_000545	chr12,chr12	-,+	C12orf43,HNF1A	4,-37798
chr2:128177206-128177473	chr2	+	128177242	128177520	True	NM_000312,NM_006609	chr2,chr2	+,-	PROC,MAP3K2	-1297,-76472
chr2:132183106-132183725	chr2	+	132183130	132183648	True	NR_002826,NR_036499	chr2,chr2	-,+	LOC401010,LOC389043	18869,-22709
chr1:120183449-120185088	chr1	+	120183583	120185062	True	NM_006623,NM_001080470	chr1,chr1	+,-	PHGDH,ZNF697	69356,5378
chr8:145599201-145600142	chr8	+	145599271	145600047	True	NM_024555,NM_174922	chr8,chr8	-,+	FBXL6,ADCK5	-17139,-1591
chr8:103137583-103137857	chr8	+	103137610	103137772	True	NM_001040630,NM_001040627,NM_001040626,NM_001040625,NM_001040624,NM_001040629,NM_001040628,NM_024410	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,-,-,-,+	NCALD,NCALD,NCALD,NCALD,NCALD,NCALD,NCALD,ODF1	-475,-1048,-1048,-1048,-1048,-1048,-1048,426075
chr8:22409623-22409854	chr8	+	22409649	22409751	True	NR_027715,NM_005775	chr8,chr8	-,+	FLJ14107,SORBS3	90021,-449
chr15:101458307-101458642	chr15	+	101458408	101458552	True	NM_001040616,NM_024652	chr15,chr15	-,+	LINS,LRRK1	-315963,907
chrX:18456764-18458684	chrX	+	18456989	18458331	True	NM_001037343,NR_033717	chrX,chrX	+,-	CDKL5,SCML2	2012,-84145
chr11:8606930-8608293	chr11	+	8607137	8608065	True	NM_000990,NM_030906	chr11,chr11	+,-	RPL27A,STK33	95929,7488
chr11:8830790-8831286	chr11	+	8830801	8831313	True	NM_139157,NM_213618,NM_020642	chr11,chr11,chr11	-,-,+	ST5,ST5,C11orf17	1619,961,101387
chr2:176032955-176033214	chr2	+	176033017	176033251	True	NM_024583,NM_001880,NR_030630	chr2,chr2,chr2	+,-,-	SCRN3,ATF2,MIR933	-772611,-120,-580
chr19:8811938-8812329	chr19	+	8811952	8812173	True	NM_178525,NM_001004699	chr19,chr19	-,+	ACTL9,OR2Z1	-2780,29217
chr12:99527508-99529395	chr12	+	99527595	99529440	True	NM_181869,NM_020140	chr12,chr12	+,-	APAF1,ANKS1B	-488568,19194
chr16:21832121-21832488	chr16	+	21832151	21832289	True	NM_170664,NR_003370	chr16,chr16	+,-	OTOA,RRN3P1	-115918,-1656
chr9:123642005-123642627	chr9	+	123642004	123642442	True	NM_015651,NR_024408,NM_001009936	chr9,chr9,chr9	-,+,-	PHF19,LOC253039,PHF19	-2398,-36735,-2398
chr1:38155537-38155779	chr1	+	38155610	38155690	True	NM_017850,NM_018101	chr1,chr1	-,+	C1orf109,CDCA8	552,2468
chr2:200331361-200331749	chr2	+	200331420	200331749	True	NM_015265,NM_001172509,NM_001172517,NR_026830	chr2,chr2,chr2,chr2	-,-,-,+	SATB2,SATB2,SATB2,FLJ32063	4291,-8601,-1589,1071
chr1:48345729-48346272	chr1	+	48346023	48346214	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	116398,342142
chr2:232791609-232791895	chr2	+	232791822	232791918	True	NM_024409,NM_152383	chr2,chr2	-,+	NPPC,DIS3L2	-863,34374
chr7:97361539-97361765	chr7	+	97361638	97361814	True	NM_001178077,NM_013997,NM_013996,NM_003182,NM_013998	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	ASNS,TAC1,TAC1,TAC1,TAC1	139714,-418,-418,-418,-418
chr1:204487436-204489328	chr1	+	204487539	204489032	True	NM_001204171,NM_002646,NM_001204172,NR_024171,NM_002393	chr1,chr1,chr1,chr1,chr1	+,-,+,+,+	MDM4,PIK3C2B,MDM4,MDM4,MDM4	-2083,-28065,-2083,-2083,-2083
chr11:69290511-69291013	chr11	+	69290637	69291033	True	NM_153451,NM_053056	chr11,chr11	-,+	ORAOV1,CCND1	199182,164839
chr22:38220941-38221168	chr22	+	38220969	38221191	True	NM_138797,NM_003614	chr22,chr22	-,+	ANKRD54,GALR3	19212,-1631
chr11:280819-281024	chr11	+	280845	281017	True	NM_025092,NM_001025295,NM_138329	chr11,chr11,chr11	+,-,+	ATHL1,IFITM5,NLRP6	8120,18559,-2326
chr17:27168235-27168483	chr17	+	27168326	27168406	True	NM_018182,NM_001077498,NM_005702	chr17,chr17,chr17	-,-,+	C17orf63,C17orf63,ERAL1	1485,1485,13636
chr3:139183222-139184659	chr3	+	139183340	139184696	True	NM_004164,NM_020191	chr3,chr3	-,+	RBP2,MRPS22	10706,-120530
chr3:49132927-49133205	chr3	+	49133015	49133245	True	NM_005051,NM_199070,NM_017730,NM_198880	chr3,chr3,chr3,chr3	-,+,-,-	QARS,NDUFAF3,QRICH1,QRICH1	8976,-73992,-1511,-1511
chr10:115996499-115997006	chr10	+	115996713	115997057	True	NM_198496,NM_018017	chr10,chr10	+,-	VWA2,C10orf118	1960,-62349
chr10:88279943-88280681	chr10	+	88280295	88280670	True	NM_015045,NM_001030015	chr10,chr10	-,+	WAPAL,OPN4	921,133643
chr5:38595459-38595925	chr5	+	38595488	38595832	True	NM_002310,NM_182801	chr5,chr5	-,+	LIFR,EGFLAM	19,-149907
chr11:126045650-126046576	chr11	+	126045687	126046393	True	NM_001144827,NM_024556	chr11,chr11	-,+	RPUSD4,FAM118B	35244,35225
chr2:228008107-228010054	chr2	+	228008112	228009685	True	NM_000091,NM_000092	chr2,chr2	+,-	COL4A3,COL4A4	19595,19641
chr13:33113094-33113329	chr13	+	33113133	33113377	True	NM_014887,NM_015032,NM_033111	chr13,chr13,chr13	-,+,-	N4BP2L2,PDS5B,N4BP2L2	-201,47186,-197
chr12:120931715-120932170	chr12	+	120931863	120932037	True	NM_003769,NM_001037495,NM_003746	chr12,chr12,chr12	-,+,+	SRSF9,DYNLL1,DYNLL1	-24305,1821,1821
chr2:74757656-74758078	chr2	+	74757748	74758032	True	NM_133637,NM_181575,NM_145074,NM_013247	chr2,chr2,chr2,chr2	-,-,+,+	DQX1,AUP1,HTRA2,HTRA2	-4340,-774,-1267,-1267
chr6:48026741-48027297	chr6	+	48026745	48027078	True	NM_207499,NM_001013732,NR_033806	chr6,chr6,chr6	-,-,+	C6orf138,C6orf138,OPN5	9406,9406,-271992
chr11:62624889-62625532	chr11	+	62625194	62625521	True	NR_003098,NR_002559,NR_002561,NR_002563,NR_002562,NM_001012662,NR_002560,NM_001012664,NR_002565,NR_002564,NM_002394,NR_000008	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,-,+,-,+,-,-,+,-	SNHG1,SNORD29,SNORD30,SNORD27,SNORD28,SLC3A2,SNORD31,SLC3A2,SNORD25,SNORD26,SLC3A2,SNORD22	-1834,-3754,-3990,-2639,-3027,-1762,-4329,-1762,-2091,-2356,-1762,-4687
chr9:118676102-118678039	chr9	+	118676137	118677727	True	NM_002581,NR_024032	chr9,chr9	+,-	PAPPA,C9orf27	238343,9713
chr6:33257480-33258150	chr6_qbl_hap6	+	4489752	4490408	False	NM_001164267,NR_028387,NM_004761,NM_005452,NM_001185181,NM_014260	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	-,-,-,-,+,+	WDR46,RGL2,RGL2,WDR46,PFDN6,PFDN6	-205,9058,9058,-205,-148,-182
chr6:33257480-33258150	chr6_mcf_hap5	+	4731253	4731909	False	NR_028387,NM_014260,NM_004761,NM_001164267,NM_005452	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	-,+,-,-,-	RGL2,PFDN6,RGL2,WDR46,WDR46	9061,-182,9061,-205,-205
chr6:33257480-33258150	chr6_cox_hap2	+	4701323	4701979	False	NR_028387,NM_014260,NM_004761,NM_001164267,NM_005452	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	-,+,-,-,-	RGL2,PFDN6,RGL2,WDR46,WDR46	9061,-182,9061,-205,-205
chr6:33257480-33258150	chr6	+	33257509	33258165	True	NM_001164267,NR_028387,NM_004761,NM_005452,NM_001185181,NM_014260	chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,-,+,+	WDR46,RGL2,RGL2,WDR46,PFDN6,PFDN6	-205,9061,9061,-205,-148,-182
chr6:33257480-33258150	chr6_dbb_hap3	+	4538835	4539491	False	NR_028387,NM_014260,NM_004761,NM_001164267,NM_005452	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	-,+,-,-,-	RGL2,PFDN6,RGL2,WDR46,WDR46	9061,-182,9061,-205,-205
chr2:113404715-113406685	chr2	+	113404952	113406481	True	NR_033871,NM_005415	chr2,chr2	-,+	FLJ42351,SLC20A1	-3195,-1569
chr22:24369081-24369306	chr22	+	24369094	24369156	True	NM_001144931,NM_000853	chr22,chr22	+,-	LOC391322,GSTT1	3960,15178
chr10:127265379-127266444	chr10	+	127265460	127266433	True	NR_023362,NM_001128202	chr10,chr10	+,-	LOC100169752,C10orf122	-2578,105337
chr4:89511852-89512287	chr4	+	89511855	89512011	True	NM_032906,NM_014606	chr4,chr4	-,+	PIGY,HERC3	-66900,1635
chr12:54362494-54362850	chr12	+	54362708	54362832	True	NM_014212,NR_003716	chr12,chr12	+,-	HOXC11,HOTAIR	4077,-193
chr21:45624105-45625129	chr21	+	45624342	45625015	True	NM_198155,NM_015259	chr21,chr21	+,-	C21orf33,ICOSLG	-70899,35869
chr1:27718510-27718830	chr1	+	27718530	27718818	True	NM_005281,NM_207397	chr1,chr1	+,-	GPR3,CD164L2	333,-8725
chr5:158689639-158690264	chr5	+	158689689	158690283	True	NM_001199380,NM_145049	chr5,chr5	-,+	RNF145,UBLCP1	-52628,37
chr6:149068700-149068922	chr6	+	149068699	149068869	True	NM_207360,NM_005715	chr6,chr6	-,+	ZC3H12D,UST	737329,-479
chr1:120692991-120693964	chr1	+	120692998	120693811	True	NM_001200001,NM_001100910	chr1,chr1	-,+	NOTCH2,FAM72B	-80681,145193
chr1:120692991-120693964	chr1	-	145121696	145122111	False	NM_004892,NM_022359	chr1,chr1	+,-	SEC22B,PDE4DIP	-25347,-45510
chr18:61261995-61262853	chr18	+	61262099	61262696	True	NM_012397,NM_002974	chr18,chr18	+,-	SERPINB13,SERPINB4	-7631,48863
chr19:36018638-36018944	chr19	+	36018778	36018918	True	NM_001166035,NM_001166034,NM_014364,NM_198538	chr19,chr19,chr19,chr19	-,-,+,-	SBSN,SBSN,GAPDHS,SBSN	385,385,5395,385
chr17:38276768-38277175	chr17	+	38276816	38276909	True	NM_001012241,NM_021724	chr17,chr17	+,-	MSL1,NR1D1	1880,-19843
chr5:7850992-7851283	chr5	+	7851042	7851292	True	NM_001089584,NM_002454	chr5,chr5	-,+	C5orf49,MTRR	22,17924
chr11:46783270-46784258	chr11	+	46783369	46784299	True	NM_000506,NR_003056	chr11,chr11	+,-	F2,SNORD67	-42677,86
chr10:30661508-30662417	chr10	+	30661915	30662387	True	NR_003524,NM_005204	chr10,chr10	-,+	LOC729668,MAP3K8	1040,60478
chr1:155278151-155278434	chr1	+	155278169	155278473	True	NM_001135822,NM_002004,NM_000298,NM_001135821,NM_181871	chr1,chr1,chr1,chr1,chr1	+,+,-,+,-	FDPS,FDPS,PKLR,FDPS,PKLR	65,65,-6944,231,-7377
chr15:73358517-73359649	chr15	+	73358724	73359381	True	NM_002499,NR_023319	chr15,chr15	+,-	NEO1,ADPGK	-13953,-282598
chr17:19998960-19999268	chr17	+	19998997	19999211	True	NM_001033553,NM_152904,NM_007202	chr17,chr17,chr17	+,+,-	SPECC1,SPECC1,AKAP10	-8713,-8713,-117868
chr9:44015805-44016683	chr9	+	44016110	44016732	True	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	-385380,-331276
chr9:44015805-44016683	chr9	+	66363547	66364169	False	NR_024443,NR_024496	chr9,chr9	-,+	LOC100133920,LOC442421	666863,130099
chr18:61636017-61637215	chr18	+	61636099	61637145	True	NM_198833,NR_027245,NM_002640,NM_001031848	chr18,chr18,chr18,chr18	+,-,+,+	SERPINB8,C18orf20,SERPINB8,SERPINB8	117,179165,117,117
chr2:191005395-191006529	chr2	+	191005658	191006582	True	NM_005259,NM_001042520,NM_001042521	chr2,chr2,chr2	-,+,+	MSTN,C2orf88,C2orf88	-78203,8389,-3223
chr7:150946924-150948214	chr7	+	150947140	150948137	True	NR_030407,NM_001003801	chr7,chr7	+,-	MIR671,SMARCD3	-11684,-1391
chr12:11809010-11809629	chr12	+	11809154	11809666	True	NM_001987,NM_006248	chr12,chr12	+,-	ETV6,PRB2	-6417,-260656
chr6:52280660-52282065	chr6	+	52280659	52282021	True	NM_018100,NM_001172420,NM_002388,NR_033327	chr6,chr6,chr6,chr6	+,+,-,+	EFHC1,EFHC1,MCM3,EFHC1	2972,3783,-131077,2972
chr11:73091529-73092044	chr11	+	73091585	73092077	True	NM_152222,NM_032871,NM_015159	chr11,chr11,chr11	+,+,-	RELT,RELT,FAM168A	-4231,-3923,217201
chr9:135754499-135756027	chr9	+	135754546	135756064	True	NM_152572,NM_018956	chr9,chr9	-,+	AK8,C9orf9	-348,-307
chrX:130202166-130202533	chrX	+	130202167	130202504	True	NM_144967,NM_182314	chrX,chrX	+,-	ARHGAP36,ENOX2	-10002,-164959
chr10:103348339-103348808	chr10	+	103348348	103348681	True	NR_033406,NM_013274,NM_015448,NM_001174085,NM_001174084	chr10,chr10,chr10,chr10,chr10	-,-,+,-,-	POLL,POLL,DPCD,POLL,POLL	-321,-321,-310,-321,-321
chr9:88897775-88898650	chr9	+	88897803	88898613	True	NM_024635,NM_030940	chr9,chr9	+,-	NAA35,ISCA1	-341797,-313
chrX:33140062-33141624	chrX	+	33140550	33141389	True	NM_004010,NM_152631,NM_004009	chrX,chrX,chrX	-,+,-	DMD,FAM47B,DMD	5218,1819523,5219
chr16:70558874-70559091	chr16	+	70558874	70559058	True	NM_012426,NM_015386,NR_003696,NR_037420,NM_001195139	chr16,chr16,chr16,chr16,chr16	+,-,+,+,-	SF3B3,COG4,SNORD111B,MIR3647,COG4	-1234,-1417,4346,4343,-1417
chrX:137910118-137910451	chrX	+	137910148	137910432	True	NR_028597,NM_001139502	chrX,chrX	+,-	SRD5A1P1,FGF13	618545,39347
chr7:39657121-39658572	chr7	+	39657165	39658591	True	NM_138701,NR_024390,NM_005402	chr7,chr7,chr7	-,+,+	C7orf11,LOC646999,RALA	515710,-8138,4560
chr16:30966649-30968478	chr16	+	30967725	30968425	True	NM_014712,NM_152288,NR_024348	chr16,chr16,chr16	+,+,-	SETD1A,ORAI3,FBXL19-AS1	189,-7379,-33135
chr9:123883825-123885207	chr9	+	123883889	123885223	True	NM_007018,NM_001735	chr9,chr9	+,-	CEP110,C5	-33366,-71335
chr1:2125708-2126005	chr1	+	2125780	2125850	True	NM_003036,NM_182533,NR_024445	chr1,chr1,chr1	+,-,-	SKI,C1orf86,LOC100128003	34283,414,-756
chr16:74349931-74350815	chr16	+	74350393	74350821	True	NR_026950,NM_002811	chr16,chr16	-,+	LOC283922,PSMD7	51382,-19771
chr14:31117150-31118996	chr14	+	31117177	31118828	True	NR_030354,NM_182835	chr14,chr14	-,+	MIR624,SCFD1	365178,-25717
chr20:44506532-44506916	chr20	+	44506540	44506896	True	NM_080608,NM_080603	chr20,chr20	-,+	C20orf165,ZSWIM1	9392,2951
chr21:46973317-46974435	chr21	+	46973317	46973531	True	NM_130444,NM_194255	chr21,chr21	+,-	COL18A1,SLC19A1	-97944,-10932
chr22:36553302-36554021	chr22	+	36553309	36553765	True	NM_145641,NM_145640,NM_145642,NM_001136540,NR_027833,NR_027834,NR_027835	chr22,chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,+,-,-,-	APOL3,APOL3,APOL3,APOL1,APOL3,APOL3,APOL3	8517,3269,8517,95351,3269,3269,3269
chr18:48407700-48408575	chr18	+	48407950	48408221	True	NM_001168335,NM_002396,NM_001127174	chr18,chr18,chr18	+,+,-	ME2,ME2,MRO	-2583,-2583,-56196
chr1:160538501-160538951	chr1	+	160538751	160538937	True	NM_001184879,NM_020335	chr1,chr1	-,+	CD84,VANGL2	10419,-168455
chr1:40999792-41000071	chr1	+	40999791	40999897	True	NM_152373,NM_014747	chr1,chr1	+,-	ZNF684,RIMS3	-2614,131485
chr2:178266567-178267586	chr2	+	178266590	178267500	True	NM_003659,NR_026966	chr2,chr2	+,-	AGPS,LOC100130691	-9181,-9171
chr9:125036761-125038014	chr9	+	125036767	125038051	True	NR_027126,NM_001173512,NR_027125,NM_033117,NM_138777,NM_199177	chr9,chr9,chr9,chr9,chr9,chr9	-,+,-,-,+,+	RBM18,MRRF,RBM18,RBM18,MRRF,MRRF	-9624,-9943,-9624,-9624,-9943,-3682
chr17:32484277-32485048	chr17	+	32484556	32485084	True	NM_002982,NM_001094	chr17,chr17	+,-	CCL2,ACCN1	97211,-731
chr10:49206136-49207714	chr10	+	49206147	49207005	True	NM_001137549,NM_001137548,NM_002750,NM_001137556	chr10,chr10,chr10,chr10	-,-,+,-	FAM25G,FAM25C,MAPK8,FAM25B	870,870,402681,870
chr10:49206136-49207714	chr10	+	47180122	47180430	False	NM_001137549,NM_001137548,NM_001098845,NM_001137556,NM_001040084,NM_005972	chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,-,+	FAM25G,FAM25C,ANXA8L1,FAM25B,ANXA8,PPYR1	1308,1308,-6082,1308,-6000,-96639
chr10:49206136-49207714	chr10	-	47741735	47741785	False	NR_024495,NM_001630	chr10,chr10	-,+	LOC642826,ANXA8L2	-498241,5134
chr10:49206136-49207714	chr10	-	48248919	48249227	False	NM_001137549,NM_001137548,NM_001098845,NM_001137556,NM_001040084,NM_002900	chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,-	FAM25G,FAM25C,ANXA8L1,FAM25B,ANXA8,RBP3	-1308,-1308,6079,-1308,5997,141814
chr15:45722885-45724578	chr15	+	45722966	45724556	True	NM_001482,NM_197955,NR_030599,NM_032413	chr15,chr15,chr15,chr15	-,+,+,+	GATM,C15orf48,MIR147B,C15orf48	-51986,-261,691,-261
chrX:24175064-24175966	chrX	+	24175258	24175889	True	NM_030624,NM_003410,NM_001178086,NM_001178095,NM_001178085,NM_001178084	chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,+	KLHL15,ZFX,ZFX,ZFX,ZFX,ZFX	-129955,-7463,-7555,-7555,-7471,-7476
chr14:24697453-24699001	chr14	+	24698150	24698986	True	NM_006156,NM_001002001,NM_001002000,NM_001199823,NM_016576,NM_001002002	chr14,chr14,chr14,chr14,chr14,chr14	-,+,+,-,+,+	NEDD8,GMPR2,GMPR2,NEDD8-MDP1,GMPR2,GMPR2	2642,2661,2661,2642,3116,3116
chr17:48209042-48210431	chr17	+	48209080	48210384	True	NM_174920,NM_000023	chr17,chr17	-,+	SAMD14,SGCA	-1913,32981
chr17:37729530-37729798	chr17	+	37729626	37729828	True	NM_032192,NM_006160	chr17,chr17	+,-	PPP1R1B,NEUROD2	53350,34397
chr5:52709569-52710431	chr5	+	52709672	52710062	True	NM_006350,NM_176806	chr5,chr5	+,-	FST,MOCS2	66532,-304074
chr2:231789893-231790730	chr2	+	231790209	231790717	True	NM_030926,NM_005683	chr2,chr2	+,-	ITM2C,GPR55	-60639,-268
chr17:48205916-48206341	chr17	+	48205942	48206350	True	NM_001199899,NM_174920	chr17,chr17	+,-	PDK2,SAMD14	-32934,867
chr19:10946924-10947945	chr19	+	10947128	10947980	True	NM_001136482,NM_006858	chr19,chr19	+,-	C19orf38,TMED1	11125,-145
chr2:71298950-71299498	chr2	+	71299016	71299488	True	NM_032601,NM_017567	chr2,chr2	-,+	MCEE,NAGK	57956,-3667
chr8:92145527-92145953	chr8	+	92145542	92145727	True	NM_001129890,NM_018710	chr8,chr8	+,-	LRRC69,TMEM55A	-30746,-92339
chr11:35707302-35707677	chr11	+	35707512	35707687	True	NM_015430,NM_017583	chr11,chr11	-,+	PAMR1,TRIM44	-160336,-23210
chr13:19664158-19664899	chr13	+	19664284	19664858	True	NR_002801,NR_026852	chr13,chr13	-,+	PHF2P1,LOC348021	27615,-81936
chr11:5676140-5676956	chr11	+	5676463	5677004	True	NM_033034,NR_002777	chr11,chr11	-,+	TRIM5,TRIM78P	29398,-12112
chr4:84029668-84030629	chr4	+	84029823	84030678	True	NM_016619,NM_001130716,NM_001130715,NM_016129	chr4,chr4,chr4,chr4	-,-,-,+	PLAC8,PLAC8,PLAC8,COPS4	5283,384,5283,-73636
chr12:108991550-108991835	chr12	+	108991586	108991796	True	NM_181724,NM_213595	chr12,chr12	-,+	TMEM119,ISCU	148,-35343
chr19:17981610-17982714	chr19	+	17981641	17982762	True	NR_000012,NM_000215,NM_000453	chr19,chr19,chr19	+,-,+	SNORA68,JAK3,SLC5A5	-8295,-22800,19
chr22:42334460-42335126	chr22	+	42334763	42335035	True	NM_024053,NM_001002876,NM_001110215,NR_024355	chr22,chr22,chr22,chr22	-,-,-,+	CENPM,CENPM,CENPM,LOC339674	8163,8163,1238,13155
chr9:125674961-125675347	chr9	+	125674965	125675381	True	NM_012197,NM_018835,NM_001100588,NM_006626	chr9,chr9,chr9,chr9	+,-,-,-	RABGAP1,RC3H2,RC3H2,ZBTB6	27906,-7403,-7403,278
chr8:144352514-144353952	chr8	+	144352796	144353922	True	NM_052963,NM_138465	chr8,chr8	-,+	TOP1MT,GLI4	63178,-3240
chr16:29801441-29801786	chr16	+	29801444	29801526	True	NM_175900,NM_007317	chr16,chr16	-,+	C16orf54,KIF22	-44104,531
chr6:160911530-160912408	chr6	+	160911560	160912343	True	NR_028093,NM_021977	chr6,chr6	-,+	LPAL2,SLC22A3	19870,-142186
chr6:160911530-160912408	chr6	+	160917651	160917701	False	NR_028093,NM_021977	chr6,chr6	-,+	LPAL2,SLC22A3	14505,-148277
chr22:21401762-21402177	chr22	+	21401893	21402219	True	NR_002829,NR_027006	chr22,chr22	-,+	P2RX6P,LOC400891	-3355,-1695
chr2:98277961-98278975	chr2	+	98278165	98278833	True	NM_001862,NM_005735	chr2,chr2	+,-	COX5B,ACTR1B	-15695,1778
chr16:6069980-6070351	chr16	+	6069983	6070373	True	NM_018723,NM_001142333,NM_201598	chr16,chr16,chr16	+,+,-	RBFOX1,RBFOX1,FAM86A	-902,-902,-922194
chr20:39656878-39657085	chr20	+	39656913	39657117	True	NM_015035,NM_003286	chr20,chr20	-,+	ZHX3,TOP1	271672,344
chr13:103248582-103248812	chr13	+	103248619	103248852	True	NM_003291,NM_001010977	chr13,chr13	+,-	TPP2,METTL21C	433,98052
chr21:44751205-44751537	chr21	+	44751263	44751503	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	118400,95549
chr20:59830784-59831624	chr20	+	59830859	59831527	True	NM_001794,NR_031658	chr20,chr20	+,-	CDH4,MIR1257	-3352,697241
chr6:160185055-160185762	chr6	+	160185175	160185805	True	NR_037166,NM_005891	chr6,chr6	-,+	LOC100129518,ACAT2	-1811,-2237
chr12:111126375-111126610	chr12	+	111126485	111126575	True	NM_001040107,NM_032369,NM_001173975	chr12,chr12,chr12	-,-,+	HVCN1,HVCN1,TCTN1	1092,421,-74624
chr10:5567550-5567825	chr10	+	5567619	5567805	True	NM_017422,NM_005185	chr10,chr10	-,+	CALML5,CALML3	-26086,-746
chr15:34329232-34330647	chr15	+	34329408	34330639	True	NM_020371,NM_152595	chr15,chr15	-,+	AVEN,PGBD4	714,63634
chr3:69173681-69174353	chr3	+	69173876	69174181	True	NM_006407,NM_198271	chr3,chr3	+,-	ARL6IP5,LMOD3	-39842,-2130
chr19:20843323-20843842	chr19	+	20843577	20843788	True	NM_001076675,NR_034060,NM_145297	chr19,chr19,chr19	-,+,-	ZNF626,ZNF85,ZNF626	668,262270,668
chr10:97051633-97051895	chr10	+	97051670	97051866	True	NM_207321,NM_020992	chr10,chr10	+,-	C10orf129,PDLIM1	-97764,-889
chr1:213088913-213089784	chr1	+	213088916	213089816	True	NM_001136474,NR_027286	chr1,chr1	+,-	VASH2,NCRNA00292	34070,-57436
chr1:77689274-77690938	chr1	+	77689385	77690417	True	NM_174858,NM_005482	chr1,chr1	+,-	AK5,PIGK	57244,-4253
chr17:74066080-74066777	chr17	+	74066409	74066618	True	NM_180990,NM_014230,NM_003857	chr17,chr17,chr17	+,-,+	ZACN,SRP68,GALR2	8644,2050,4273
chr8:17398528-17400362	chr8	+	17398601	17400256	True	NM_001164771,NM_003046,NM_004686	chr8,chr8,chr8	+,+,-	SLC7A2,SLC7A2,MTMR7	-2366,-2366,-127561
chr3:195383675-195384487	chr3	+	195383910	195384526	True	NM_001647,NR_003265	chr3,chr3	-,+	APOD,SDHAP2	-72834,383
chr3:195383675-195384487	chr3	-	195717755	195717805	False	NR_034088,NR_003264	chr3,chr3	+,-	LOC401109,SDHAP1	151701,-605
chr3:195383675-195384487	chr3	-	197355505	197355564	False	NR_003266,NM_001011537	chr3,chr3	-,+	LOC220729,FYTTD1	-753,120859
chr6:30909327-30910083	chr6_qbl_hap6	+	2202540	2203060	False	NM_205854,NM_080870	chr6_qbl_hap6,chr6_qbl_hap6	-,+	SFTA2,DPCR1	-9617,-853
chr6:30909327-30910083	chr6_mcf_hap5	+	2291509	2292029	False	NM_205854,NM_080870	chr6_mcf_hap5,chr6_mcf_hap5	-,+	SFTA2,DPCR1	-9618,-854
chr6:30909327-30910083	chr6_cox_hap2	+	2421472	2421992	False	NM_205854,NM_080870	chr6_cox_hap2,chr6_cox_hap2	-,+	SFTA2,DPCR1	-9597,-845
chr6:30909327-30910083	chr6	+	30909568	30910088	True	NM_205854,NM_080870	chr6,chr6	-,+	SFTA2,DPCR1	-9616,-854
chr6:30909327-30910083	chr6_dbb_hap3	+	2203683	2204203	False	NM_205854,NM_080870	chr6_dbb_hap3,chr6_dbb_hap3	-,+	SFTA2,DPCR1	-9621,-853
chr6:34432874-34433280	chr6	+	34432987	34433311	True	NM_001204091,NM_020804	chr6,chr6	-,+	RPS10,PACSIN1	-39085,541
chr20:17949562-17949960	chr20	+	17949678	17950002	True	NR_003045,NM_152227,NM_014426,NM_052865	chr20,chr20,chr20,chr20	-,-,-,+	SNORD17,SNX5,SNX5,C20orf72	-6089,-188,-524,-1
chr1:150602636-150604107	chr1	+	150602791	150603823	True	NM_207168,NM_004436,NM_207045,NM_207046,NM_207047,NM_207042,NM_207043,NM_207044,NR_036211	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,-,-,-,+	ENSA,ENSA,ENSA,ENSA,ENSA,ENSA,ENSA,ENSA,MIR4257	-693,-693,-1182,-1182,-1182,-693,-693,-693,-78438
chr7:128579931-128580151	chr7	+	128579943	128580181	True	NM_199349,NM_001098629,NM_032643,NM_001098627,NM_001098630	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	KCP,IRF5,IRF5,IRF5,IRF5	-29170,-2000,-1723,590,-2000
chr1:53018308-53018530	chr1	+	53018353	53018447	True	NM_001009881,NM_015696,NM_015269	chr1,chr1,chr1	-,+,-	ZCCHC11,GPX7,ZCCHC11	365,49595,365
chr6:8436062-8436271	chr6	+	8436123	8436305	True	NM_015948,NR_004855,NM_001142541,NM_001142540	chr6,chr6,chr6,chr6	-,+,-,-	SLC35B3,HULC,SLC35B3,SLC35B3	-329,216136,-329,-329
chr4:71590709-71591138	chr4	+	71590730	71591041	True	NM_144646,NM_014961,NM_001037442	chr4,chr4,chr4	-,+,+	IGJ,RUFY3,RUFY3	-58382,-3085,-3085
chr11:70116244-70116449	chr11	+	70116265	70116493	True	NM_133266,NM_003626,NM_177423	chr11,chr11,chr11	-,+,+	SHANK2,PPFIA1,PPFIA1	391480,329,329
chr2:137770570-137772443	chr2	+	137770738	137772280	True	NM_001080427,NM_003467	chr2,chr2	+,-	THSD7B,CXCR4	-22337,-895013
chr18:44497210-44497455	chr18	+	44497264	44497330	True	NM_173206,NM_004671,NM_031303	chr18,chr18,chr18	-,-,+	PIAS2,PIAS2,KATNAL2	186,186,29456
chr1:44594606-44595174	chr1	+	44594795	44595143	True	NM_001024845,NM_173484	chr1,chr1	-,+	SLC6A9,KLF17	-97661,-10324
chr2:119984384-119985003	chr2	+	119984407	119985031	True	NM_182528,NM_001008410,NM_018234,NM_182915	chr2,chr2,chr2,chr2	-,+,+,+	C1QL2,STEAP3,STEAP3,STEAP3	-67936,-3074,-3074,-3074
chr6:32600560-32601716	chr6_dbb_hap3	+	3882299	3883006	False	NM_020056,NM_002123	chr6_dbb_hap3,chr6_dbb_hap3	+,-	HLA-DQA2,HLA-DQB1	108719,30178
chr6:32600560-32601716	chr6	+	32600577	32601725	True	NM_002122,NM_002123	chr6,chr6	+,-	HLA-DQA1,HLA-DQB1	3457,32791
chr6:32600560-32601716	chr6_mann_hap4	+	4056732	4057439	False	NM_020056,NM_001198858	chr6_mann_hap4,chr6_mann_hap4	+,-	HLA-DQA2,HLA-DQB2	108881,131151
chr6:32600560-32601716	chr6_ssto_hap7	+	4034022	4034943	False	NM_020056,NM_002124	chr6_ssto_hap7,chr6_ssto_hap7	+,-	HLA-DQA2,HLA-DRB1	105887,-97192
chr6:32600560-32601716	chr6_mcf_hap5	+	3939440	3940361	False	NM_020056,NM_002123	chr6_mcf_hap5,chr6_mcf_hap5	+,-	HLA-DQA2,HLA-DQB1	105983,28473
chr16:21253598-21255570	chr16	+	21253903	21255268	True	NM_003460,NM_145865	chr16,chr16	-,+	ZP2,ANKS4B	-31035,-8948
chr17:42292569-42293032	chr17	+	42292595	42293074	True	NM_001076683,NM_001076684,NM_177441,NM_014233	chr17,chr17,chr17,chr17	-,-,+,-	UBTF,UBTF,TMUB2,UBTF	5226,3900,-28072,2640
chr10:101942079-101943009	chr10	+	101942104	101943025	True	NM_006459,NM_005063,NM_001100626	chr10,chr10,chr10	-,+,-	ERLIN1,SCD,ERLIN1	2766,163746,2846
chr5:65909037-65909999	chr5	+	65909036	65910018	True	NM_001164664,NM_005582	chr5,chr5	+,-	MAST4,CD180	-16914,582649
chr8:27850770-27852259	chr8	+	27850911	27852179	True	NM_173833,NM_018091	chr8,chr8	-,+	SCARA5,ELP3	-542,98404
chr3:150423028-150424568	chr3	+	150423370	150423912	True	NM_016275,NM_152394	chr3,chr3	+,-	SELT,FAM194A	-102362,-1628
chr6:154681373-154682399	chr6	+	154681430	154682284	True	NM_015553,NM_001130700,NM_001145287	chr6,chr6,chr6	-,-,+	IPCEF1,IPCEF1,OPRM1	-3530,-3530,-273846
chr11:73475881-73476790	chr11	+	73476437	73476790	True	NM_198896,NM_016055,NM_002869	chr11,chr11,chr11	-,+,-	RAB6A,MRPL48,RAB6A	-4236,22126,-4236
chr9:33938716-33940699	chr9	+	33938846	33940458	True	NR_003685,NR_003690	chr9,chr9	-,+	SNORD121A,SNORD121B	12457,-4624
chr4:2421177-2423172	chr4	+	2421268	2422915	True	NM_001193282,NM_001172656,NM_001172657,NM_001172658,NM_020972	chr4,chr4,chr4,chr4,chr4	+,-,-,-,-	LOC402160,ZFYVE28,ZFYVE28,ZFYVE28,ZFYVE28	-618,-898,-898,-898,-898
chr9:140148007-140148407	chr9	+	140148049	140148381	True	NM_015456,NM_001004353,NM_001001710	chr9,chr9,chr9	+,+,-	COBRA1,C9orf173,FAM166A	1377,-2370,-5827
chr8:11225791-11227123	chr8	+	11225847	11227138	True	NR_026814,NM_053279	chr8,chr8	+,-	C8orf12,FAM167A	13,97196
chr17:48711253-48711832	chr17	+	48711308	48711868	True	NM_052855,NM_001144070,NM_003786	chr17,chr17,chr17	-,+,+	ANKRD40,ABCC3,ABCC3	73452,349,349
chr4:186130411-186130616	chr4	+	186130413	186130553	True	NM_020827,NM_031953	chr4,chr4	-,+	KIAA1430,SNX25	-5231,730
chr7:94942145-94943594	chr7	+	94942245	94943329	True	NM_145872,NM_000446	chr7,chr7	+,-	ASB4,PON1	171883,10605
chr3:9292023-9292965	chr3	+	9292036	9292998	True	NM_001114092,NM_014850,NM_001033117	chr3,chr3,chr3	+,-,-	THUMPD3,SRGAP3,SRGAP3	111718,-725,-725
chr12:45682689-45683241	chr12	+	45682837	45683293	True	NM_001142678,NR_037144	chr12,chr12	+,-	ANO6,PLEKHA8P1	3172,-73048
chr1:62903348-62904946	chr1	+	62903418	62904768	True	NM_001017415,NM_001017416,NM_181712,NM_003368	chr1,chr1,chr1,chr1	+,+,-,+	USP1,USP1,KANK4,USP1	-1495,-1495,-118335,-1087
chr1:52521044-52521627	chr1	+	52521174	52521673	True	NM_015913,NM_001136497,NM_152265,NR_024350	chr1,chr1,chr1,chr1	-,+,+,+	TXNDC12,BTF3L4,BTF3L4,BTF3L4	-127,183,183,183
chr7:99526402-99527068	chr7	+	99526469	99526967	True	NR_036679,NM_181538,NM_033017,NM_033091	chr7,chr7,chr7,chr7	+,-,-,-	AZGP1P1,GJC3,TRIM4,TRIM4	51417,326,-9246,-9246
chr1:92630309-92632027	chr1	+	92630825	92631880	True	NM_053274,NM_015237	chr1,chr1	-,+	GLMN,KIAA1107	132753,728
chr13:25948007-25948300	chr13	+	25948042	25948271	True	NM_004685,NM_016529	chr13,chr13	-,+	MTMR6,ATP8A2	-86338,-1884
chr3:36978510-36980169	chr3	+	36978709	36980068	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	6542,54772
chr19:45348705-45349050	chr19	+	45348783	45349027	True	NM_001042724,NM_145288,NM_002856	chr19,chr19,chr19	+,-,+	PVRL2,ZNF296,PVRL2	365,230711,365
chr20:42815763-42816010	chr20	+	42815869	42815941	True	NM_024034,NM_175913,NM_020433	chr20,chr20,chr20	+,-,-	GDAP1L1,JPH2,JPH2	59966,327,327
chr11:65779786-65780303	chr11	+	65779875	65780266	True	NM_001323,NM_032325	chr11,chr11	+,-	CST6,EIF1AD	-470,-10297
chr9:127269728-127269987	chr9	+	127269753	127269813	True	NM_004959,NM_001161808	chr9,chr9	-,+	NR5A1,GPR144	-54,-56381
chr4:1858922-1859536	chr4	+	1859117	1859583	True	NM_012318,NM_001042424	chr4,chr4	-,+	LETM1,WHSC1	-1143,13539
chr10:44878531-44878905	chr10	+	44878683	44878901	True	NM_001178134,NM_000609,NM_199168,NR_033846,NM_001033886	chr10,chr10,chr10,chr10,chr10	-,-,-,+,-	CXCL12,CXCL12,CXCL12,LOC283033,CXCL12	1694,1694,1694,-473982,1694
chr22:38671195-38672363	chr22	+	38671384	38672292	True	NM_012264,NM_001195072,NM_001195071,NM_001161573	chr22,chr22,chr22,chr22	-,-,-,+	TMEM184B,TMEM184B,TMEM184B,MAFF	-2344,-2344,-2714,-72415
chr19:56701662-56703283	chr19	+	56701947	56703165	True	NM_033106,NM_001080456	chr19,chr19	+,-	GALP,ZSCAN5B	-14615,1306
chr12:14974672-14975110	chr12	+	14974694	14975120	True	NM_175874,NM_001013698	chr12,chr12	+,-	C12orf60,C12orf69	-18240,-7578
chrX:48370765-48370981	chrX	+	48370773	48370997	True	NM_033518,NM_203475,NM_203474,NM_022825,NM_203473,NM_006579	chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,+	SLC38A5,PORCN,PORCN,PORCN,PORCN,EBP	-42129,-2652,-2652,-3453,-3453,9166
chr22:41842490-41842707	chr22	+	41842545	41842719	True	NM_001098,NM_016272	chr22,chr22	+,-	ACO2,TOB2	22409,358
chr7:25015860-25017329	chr7	+	25016001	25017194	True	NM_145321,NM_145322,NM_145320,NM_015550,NM_016447	chr7,chr7,chr7,chr7,chr7	-,-,-,-,+	OSBPL3,OSBPL3,OSBPL3,OSBPL3,MPP6	2616,2616,2616,2616,-402967
chr14:103011713-103012170	chr14	+	103011800	103012156	True	NM_152326,NR_036192	chr14,chr14	-,+	ANKRD9,MIR4309	-35672,-5870
chr5:82766882-82767737	chr5	+	82767018	82767653	True	NM_001126336,NM_004385,NM_001164097,NM_001884,NM_001164098	chr5,chr5,chr5,chr5,chr5	+,+,+,-,+	VCAN,VCAN,VCAN,HAPLN1,VCAN	-51,-51,-51,249293,-51
chr17:38522374-38522769	chr17	+	38522475	38522817	True	NM_001024809,NM_152219	chr17,chr17	+,-	RARA,GJD3	-24255,-1530
chr10:72359467-72359755	chr10	+	72359525	72359711	True	NM_001083116,NM_080722,NM_005041	chr10,chr10,chr10	-,+,-	PRF1,ADAMTS14,PRF1	2870,72847,2870
chr3:44380143-44380350	chr3	+	44380209	44380331	True	NM_001029840,NM_001029839,NM_173826,NM_181489	chr3,chr3,chr3,chr3	+,+,+,-	C3orf23,C3orf23,C3orf23,ZNF445	-649,-316,-316,138881
chr17:6947871-6949646	chr17	+	6948047	6949615	True	NM_201566,NM_153357	chr17,chr17	+,-	SLC16A13,SLC16A11	-8711,-805
chrX:7896604-7897347	chrX	+	7896666	7897382	True	NM_001142389,NM_001172672,NM_013452,NM_004650	chrX,chrX,chrX,chrX	-,-,+,-	PNPLA4,PNPLA4,VCX,PNPLA4	-886,-886,-86414,-1191
chr6:159589715-159590007	chr6	+	159589837	159589993	True	NM_032532,NM_138810	chr6,chr6	+,-	FNDC1,TAGAP	435,-123653
chr14:47811882-47812456	chr14	+	47811902	47812494	True	NM_182830,NM_020937	chr14,chr14	-,+	MDGA2,FANCM	3,-2206817
chr11:133827454-133828230	chr11	+	133827469	133828201	True	NM_014987,NR_027276	chr11,chr11	-,+	IGSF9B,LOC100128239	-589,73965
chr13:36050988-36052200	chr13	+	36051097	36052233	True	NM_001204197,NM_005584	chr13,chr13	+,-	NBEA,MAB21L1	-262,-265
chr2:47630997-47631968	chr2	+	47631001	47631693	True	NM_022055,NM_000251	chr2,chr2	-,+	KCNK12,MSH2	165827,-789
chr8:23559837-23560192	chr8	+	23559919	23560169	True	NM_016612,NM_001136271	chr8,chr8	+,-	SLC25A37,NKX2-6	-173607,3803
chr9:80765713-80766920	chr9	+	80765790	80766756	True	NM_001098802,NM_002072	chr9,chr9	+,-	CEP78,GNAQ	84234,-119571
chr20:49126092-49126621	chr20	+	49126247	49126617	True	NM_080829,NM_002827	chr20,chr20	-,+	FAM65C,PTPN1	126859,273
chr5:43512975-43514694	chr5	+	43513389	43514705	True	NM_198566,NM_012343	chr5,chr5	-,+	C5orf34,NNT	618,88085
chr16:24740220-24740665	chr16	+	24740259	24740591	True	NM_001006634,NM_014494	chr16,chr16	-,+	ARHGAP17,TNRC6A	286134,457
chr6:139698372-139698941	chr6	+	139698422	139698926	True	NM_016217,NM_001168389,NM_006079,NM_001168388	chr6,chr6,chr6,chr6	+,-,-,-	HECA,CITED2,CITED2,CITED2	-242224,-3072,-2637,-2923
chr5:140201644-140202713	chr5	+	140201793	140202481	True	NM_031849,NM_002109,NM_018909,NM_018908,NM_031848,NM_031501	chr5,chr5,chr5,chr5,chr5,chr5	+,-,+,+,+,+	PCDHA6,HARS,PCDHA6,PCDHA5,PCDHA6,PCDHA5	5168,-130822,5168,-483,5168,-483
chr11:65836094-65837013	chr11	+	65836265	65836999	True	NM_033036,NM_018026	chr11,chr11	-,+	GAL3ST3,PACS1	-19614,824
chr17:1933482-1933685	chr17	+	1933601	1933671	True	NM_178568,NM_001383	chr17,chr17	-,+	RTN4RL1,DPH1	-5423,-221
chr10:75005360-75005746	chr10	+	75005363	75005775	True	NM_173348,NM_015190,NM_016065	chr10,chr10,chr10	+,-,-	FAM149B1,DNAJC9,MRPS16	-77539,1300,6726
chr22:29980998-29981234	chr22	+	29981091	29981191	True	NM_181825,NM_001202502,NM_003634	chr22,chr22,chr22	+,-,-	NF2,NIPSNAP1,NIPSNAP1	18353,-4006,-3765
chr20:61888126-61890032	chr20	+	61888330	61889804	True	NM_152864,NR_024389	chr20,chr20	-,+	NKAIN4,FLJ16779	-2438,-3051
chr3:48659249-48659887	chr3	+	48659262	48659801	True	NM_033629,NM_001008269	chr3,chr3	+,-	TREX1,TMEM89	-152084,-73
chr3:50318317-50318577	chr3	+	50318363	50318488	True	NM_006764,NM_153215	chr3,chr3	-,+	IFRD2,C3orf45	11595,-1901
chr11:1328014-1328235	chr11	+	1328178	1328284	True	NM_019009,NR_029409	chr11,chr11	-,+	TOLLIP,LOC255512	2658,2653
chr2:166625463-166625770	chr2	+	166625583	166625645	True	NM_004482,NM_024969	chr2,chr2	-,+	GALNT3,CSRNP3	25208,-196788
chr22:19554588-19555858	chr22	+	19554599	19555651	True	NR_024381,NM_003504	chr22,chr22	-,+	LOC150185,CDC45	-237,-87234
chr14:105260980-105261287	chr14	+	105260988	105261180	True	NM_005163,NM_001014432,NM_001014431,NM_001137601	chr14,chr14,chr14,chr14	-,-,-,+	AKT1,AKT1,AKT1,ZBTB42	-1050,950,950,5752
chr1:208083045-208083459	chr1	+	208083052	208083430	True	NM_001773,NM_001025109,NR_026817	chr1,chr1,chr1	-,-,+	CD34,CD34,LOC148696	1303,1303,-91379
chr1:151430765-151431119	chr1	+	151430767	151430991	True	NM_001194937,NM_020770,NM_015100,NM_001194938,NM_145796	chr1,chr1,chr1,chr1,chr1	-,+,-,-,-	POGZ,CGN,POGZ,POGZ,POGZ	1000,52870,1000,1000,1000
chr16:89045231-89045505	chr16	+	89045300	89045434	True	NR_023316,NM_005187	chr16,chr16	+,-	ACSF3,CBFA2T3	114819,-1796
chr1:150238848-150239951	chr1	+	150238906	150239996	True	NM_024579,NM_016022,NM_001077628,NM_012113	chr1,chr1,chr1,chr1	+,-,-,+	C1orf54,APH1A,APH1A,CA14	5186,1586,1586,-8739
chr20:55205055-55205303	chr20	+	55205169	55205351	True	NM_080615,NM_003222	chr20,chr20	-,+	GCNT7,TFAP2C	-104188,-862
chr6:138427307-138427725	chr6	+	138427308	138427742	True	NM_022121,NM_020340	chr6,chr6	-,+	PERP,KIAA1244	968,55310
chr4:111446483-111447151	chr4	+	111446505	111447113	True	NM_000325,NM_001977	chr4,chr4	-,+	PITX2,ENPEP	97192,-49327
chr7:5570557-5571374	chr7	+	5570582	5571410	True	NM_001101,NM_003088	chr7,chr7	-,+	ACTB,FSCN1	-350,61043
chr1:34642832-34644279	chr1	+	34643109	34644287	True	NM_001134734,NM_052896	chr1,chr1	+,-	C1orf94,CSMD2	-607,-11666
chr19:34288738-34288963	chr19	+	34288749	34288809	True	NM_001129995,NM_001129994,NM_001166057,NM_024076	chr19,chr19,chr19,chr19	+,+,-,+	KCTD15,KCTD15,PEPD,KCTD15	-1052,-1052,-275950,-1052
chr1:154925738-154926849	chr1	+	154925876	154926780	True	NM_001826,NM_020524,NM_138300	chr1,chr1,chr1	+,-,-	CKS1B,PBXIP1,PYGO2	20337,1837,7528
chr7:151135252-151136274	chr7	+	151135301	151136239	True	NR_034013,NM_144727,NR_037468	chr7,chr7,chr7	+,-,-	LOC100131176,CRYGN,MIR3907	-29030,910,-4576
chr8:27492278-27493845	chr8	+	27492351	27493573	True	NM_016240,NM_001831,NM_182826	chr8,chr8,chr8	+,-,+	SCARA3,CLU,SCARA3	-825,-20024,-825
chr17:3498336-3498617	chr17	+	3498412	3498562	True	NM_080705,NM_080706,NM_018727,NM_001031681	chr17,chr17,chr17,chr17	-,-,-,+	TRPV1,TRPV1,TRPV1,CTNS	613,-2241,1824,41199
chr3:187454729-187455334	chr3	+	187454755	187455243	True	NM_001134738,NM_001130845,NM_001706,NR_034062	chr3,chr3,chr3,chr3	-,-,-,+	BCL6,BCL6,BCL6,LOC100131635	-2060,-470,8320,-34652
chr1:48293682-48295198	chr1	+	48293756	48295158	True	NM_001194986,NM_001011547,NM_004474	chr1,chr1,chr1	-,+,+	LOC388630,SLC5A9,FOXD2	167454,393198,-392118
chr11:65341166-65341514	chr11	+	65341215	65341483	True	NM_001099409,NM_006396,NM_152832,NM_021070,NM_001098785,NM_001098784	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,-,+,+	EHBP1L1,SSSCA1,FAM89B,LTBP3,FAM89B,FAM89B	2025,-3323,-1446,-15516,-1446,-1446
chr2:27603912-27604244	chr2	+	27603918	27604218	True	NM_001201459,NM_014748,NM_144631	chr2,chr2,chr2	-,+,-	ZNF513,SNX17,ZNF513	-607,-10580,-307
chr19:37859929-37861223	chr19	+	37860187	37861075	True	NM_032453,NM_152484	chr19,chr19	+,-	ZNF527,ZNF569	983,97314
chr17:2414447-2414822	chr17	+	2414449	2414814	True	NM_000430,NM_024086	chr17,chr17	+,-	PAFAH1B1,METTL16	82108,436
chr1:45452507-45452792	chr1	+	45452537	45452629	True	NM_000374,NM_020365,NM_001166588	chr1,chr1,chr1	+,-,-	UROD,EIF2B3,EIF2B3	25175,-176,-176
chr8:143998916-144000779	chr8	+	143999285	144000470	True	NM_000498,NM_002066	chr8,chr8	-,+	CYP11B2,GML	-26,-83120
chr10:30667736-30668635	chr10	+	30667763	30668269	True	NR_003524,NM_005204	chr10,chr10	-,+	LOC729668,MAP3K8	-4386,54596
chr1:205362523-205363969	chr1	+	205362837	205363490	True	NM_002596,NM_001001552	chr1,chr1	+,-	CDK18,LEMD1	110193,27786
chr7:45197935-45198941	chr7	+	45198044	45198960	True	NM_199122,NM_005856	chr7,chr7	-,+	TBRG4,RAMP3	-46727,-728
chr2:43020011-43020314	chr2	+	43020092	43020198	True	NM_020744,NM_012205	chr2,chr2	+,-	MTA3,HAAO	-224472,-341
chr3:113258705-113260107	chr3	+	113258875	113259949	True	NM_144718,NM_017699	chr3,chr3	-,+	SPICE1,SIDT1	-24841,-7708
chr17:40120420-40120695	chr17	+	40120425	40120673	True	NM_033133,NM_198830	chr17,chr17	+,-	CNP,ACLY	-1717,-45153
chr5:71621043-71622347	chr5	+	71621042	71622182	True	NM_024754,NM_015084	chr5,chr5	+,-	PTCD2,MRPS27	-4894,-4958
chr5:1202488-1202756	chr5	+	1202498	1202776	True	NM_001003841,NM_006598	chr5,chr5	+,-	SLC6A19,SLC12A7	-839,-90326
chr20:33680813-33681606	chr20	+	33680958	33681644	True	NM_006404,NM_015638,NM_199368	chr20,chr20,chr20	+,-,-	PROCR,TRPC4AP,TRPC4AP	78129,-340,-340
chr3:50378286-50378490	chr3	+	50378327	50378403	True	NM_015896,NM_007022,NM_170712,NM_170713,NM_007182,NM_170714	chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-	ZMYND10,CYB561D2,RASSF1,RASSF1,RASSF1,RASSF1	4803,9893,-2663,-3432,14,14
chr4:129730680-129730904	chr4	+	129730815	129730905	True	NM_199320,NM_024900,NM_144643	chr4,chr4,chr4	+,+,-	PHF17,PHF17,SCLT1	-88,-88,283909
chr2:77744367-77745711	chr2	+	77744407	77745700	True	NM_024993,NM_001134745,NM_198448	chr2,chr2,chr2	-,-,+	LRRTM4,LRRTM4,REG3G	3852,3852,1507125
chr2:85132952-85133335	chr2	+	85133015	85133259	True	NM_021103,NM_001080824	chr2,chr2	+,-	TMSB10,C2orf89	-303,-24763
chr3:178304626-178305302	chr3	+	178304628	178305116	True	NM_022470,NM_005832	chr3,chr3	-,+	ZMAT3,KCNMB2	484590,-28068
chr2:55640165-55641010	chr2	+	55640368	55640840	True	NM_080667,NM_001135597,NM_018084	chr2,chr2,chr2	+,-,-	CCDC104,CCDC88A,CCDC88A	105899,6267,6267
chr2:27273511-27273725	chr2	+	27273598	27273756	True	NM_001035507,NM_021831,NM_001134693	chr2,chr2,chr2	+,+,-	AGBL5,AGBL5,OST4	734,734,20861
chr7:94156027-94156732	chr7	+	94156133	94156747	True	NM_001099400,NM_022900	chr7,chr7	-,+	SGCE,CASD1	128832,-17018
chr10:22630494-22631034	chr10	+	22630513	22631062	True	NM_172242,NM_012443,NR_036533	chr10,chr10,chr10	+,+,-	SPAG6,SPAG6,LOC100499489	3336,3336,95846
chr8:23019124-23020525	chr8	+	23019220	23020419	True	NM_003840,NM_003841	chr8,chr8	-,+	TNFRSF10D,TNFRSF10C	1177,-58951
chr19:18669324-18669888	chr19	+	18669350	18669764	True	NM_001171949,NM_001171948,NM_012181,NM_024069	chr19,chr19,chr19,chr19	+,+,-,+	C19orf50,C19orf50,FKBP8,C19orf50	-829,-829,-14967,-829
chr12:21215641-21216826	chr12	+	21215739	21216844	True	NM_001009562,NM_021094	chr12,chr12	+,-	LST-3TM12,SLCO1A2	-47171,271041
chr17:45087328-45088109	chr17	+	45087355	45088101	True	NM_203400,NM_054022	chr17,chr17	-,+	RPRML,GOSR2	-30741,-86920
chr16:30622791-30623616	chr16	+	30623048	30623393	True	NM_138447,NM_024031	chr16,chr16	-,+	ZNF689,PRR14	-1366,38847
chr5:141489231-141489671	chr5	+	141489230	141489692	True	NM_005471,NM_030571	chr5,chr5	-,+	GNPDA1,NDFIP1	-96610,-964
chr15:42189636-42189948	chr15	+	42189703	42189994	True	NM_016642,NM_001114633	chr15,chr15	-,+	SPTBN5,PLA2G4B	-3428,-58743
chr8:12585718-12586519	chr8	+	12585717	12586546	True	NR_037492,NR_037495	chr8,chr8	-,+	MIR3926-1,MIR3926-2	-904,-1026
chr9:35592859-35593215	chr9	+	35592872	35593020	True	NM_001782,NM_006285	chr9,chr9	-,+	CD72,TESK1	25466,12260
chr1:11906498-11907169	chr1	+	11906988	11907208	True	NR_037806,NM_006172	chr1,chr1	+,-	NPPA-AS1,NPPA	-6664,682
chr19:42726531-42727380	chr19	+	42726532	42727342	True	NM_133444,NM_133328	chr19,chr19	+,-	ZNF526,DEDD2	-2091,-4719
chr3:121317485-121318103	chr3	+	121317547	121318033	True	NM_199420,NM_016298	chr3,chr3	-,+	POLQ,FBXO40	-52694,-5428
chr14:102609597-102610173	chr14	+	102609625	102609844	True	NM_144574,NM_181308,NM_181302,NM_181291,NM_001017963	chr14,chr14,chr14,chr14,chr14	+,+,+,+,-	WDR20,WDR20,WDR20,WDR20,HSP90AA1	-3468,-3468,-3468,-3468,-3539
chr16:19732810-19734327	chr16	+	19732809	19734016	True	NM_153208,NM_001012991	chr16,chr16	+,-	IQCK,C16orf88	-5090,-3317
chr13:36833125-36833473	chr13	+	36833239	36833509	True	NM_001198910,NM_001111046	chr13,chr13	-,+	C13orf38-SOHLH2,CCNA1	38533,172457
chr1:67579341-67580517	chr1	+	67579368	67580365	True	NM_001013674,NM_144701	chr1,chr1	-,+	C1orf141,IL23R	13916,51803
chr10:73848613-73849056	chr10	+	73848725	73848795	True	NM_001134434,NM_004273,NM_014767	chr10,chr10,chr10	-,+,-	SPOCK2,CHST3,SPOCK2	45,-124656,45
chr16:419878-420141	chr16	+	419905	420167	True	NM_006428,NR_024453	chr16,chr16	-,+	MRPL28,LOC100134368	452,12073
chr2:154729824-154730504	chr2	+	154729905	154730543	True	NM_019845,NM_052917	chr2,chr2	-,+	RPRM,GALNT13	-394583,-1530
chr1:161372069-161372891	chr1	+	161372071	161372683	True	NM_001013625,NM_003001	chr1,chr1	-,+	C1orf192,SDHC	-34407,-87956
chr10:38728064-38729334	chr10	+	38728064	38728481	True	NR_027269,NR_024497	chr10,chr10	-,+	SEPT7L,LOC399744	-36284,-11041
chr10:38728064-38729334	chr4	+	119543247	119543326	False	NM_014822,NM_020961	chr4,chr4	-,+	SEC24D,METTL14	214061,63247
chr10:38728064-38729334	chr4	-	120339567	120339646	False	NR_037596,NR_037630	chr4,chr4	-,+	FLJ14186,LOC645513	-7752,36291
chr15:40519907-40520385	chr15	+	40519913	40520434	True	NM_001128629,NM_001039905	chr15,chr15	+,-	PAK6,C15orf56	-10335,24726
chr12:96164926-96166871	chr12	+	96165108	96166643	True	NM_003095,NM_021229	chr12,chr12	+,-	SNRPF,NTN4	86065,17950
chr22:42591597-42593419	chr22	+	42591866	42593282	True	NM_005650,NR_036498	chr22,chr22	-,+	TCF20,LOC388906	18217,72476
chr15:30918535-30918876	chr15	+	30918596	30918864	True	NM_148911,NM_001039841	chr15,chr15	-,+	CHRFAM7A,ARHGAP11B	-232732,14
chr15:30918535-30918876	chr15	+	32908103	32908251	False	NM_014783,NM_199357,NR_036650	chr15,chr15,chr15	+,+,-	ARHGAP11A,ARHGAP11A,LOC100288615	-465,-465,-82161
chr5:177582220-177583235	chr5	+	177582548	177583039	True	NM_022762,NM_017838,NM_001034833	chr5,chr5,chr5	+,-,-	RMND5B,NHP2,NHP2	-24572,-1587,-1587
chr5:37247990-37248320	chr5	+	37248160	37248232	True	NM_018034,NM_023073	chr5,chr5	+,-	WDR70,C5orf42	131179,1358
chr22:20070183-20070445	chr22	+	20070188	20070434	True	NR_037412,NM_001190326,NM_022727,NM_022720,NR_031706	chr22,chr22,chr22,chr22,chr22	+,+,-,+,+	MIR3618,DGCR8,TRMT2A,DGCR8,MIR1306	2834,-2491,34384,-2491,3146
chr13:78327411-78328312	chr13	+	78327415	78328329	True	NR_037438,NM_144595	chr13,chr13	-,+	MIR3665,SLAIN1	-55164,-12171
chr6:42882009-42883091	chr6	+	42882109	42883003	True	NM_138296,NM_001008739	chr6,chr6	+,-	PTCRA,C6orf226	723,-23555
chr5:65018775-65019361	chr5	+	65018910	65019300	True	NM_020726,NM_019072	chr5,chr5	+,-	NLN,SGTB	-938,-969
chr3:23963489-23963969	chr3	+	23963554	23963874	True	NM_002948,NM_020345	chr3,chr3	+,-	RPL15,NKIRAS1	-4966,-5017
chr15:25432298-25432636	chr15	+	25432351	25432665	True	NR_003358,NR_003298,NR_003305,NR_003344,NR_003351,NR_003299,NM_130838,NR_003300,NR_003301,NR_003302,NR_003303,NR_003304,NR_003297,NR_003306	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,-,+,+,+,+,+,+,+	SNORD115-43,SNORD115-6,SNORD115-13,SNORD115-29,SNORD115-36,SNORD115-7,UBE3A,SNORD115-8,SNORD115-9,SNORD115-10,SNORD115-11,SNORD115-12,SNORD115-5,SNORD115-14	1895,-6758,5802,1895,1895,-4870,218038,-2949,-1624,17,1895,-1624,-1621,7402
chr1:2408281-2408515	chr1	+	2408280	2408562	True	NM_014638,NM_018216	chr1,chr1	+,-	PLCH2,PANK4	-577,49523
chrX:111325918-111326135	chrX	+	111325942	111326008	True	NM_012471,NM_001004308	chrX,chrX	-,+	TRPC5,ZCCHC16	46,244
chr21:45589588-45590234	chr21	+	45589695	45590125	True	NM_198155,NM_015259	chr21,chr21	+,-	C21orf33,ICOSLG	-36252,70759
chr22:31062531-31063144	chr22	+	31062800	31063160	True	NM_152511,NM_030758	chr22,chr22	-,+	DUSP18,OSBP2	762,27632
chr2:111409857-111410793	chr2	+	111409858	111410828	True	NM_004336,NM_001142807	chr2,chr2	-,+	BUB1,ACOXL	24906,79321
chr3:192635303-192635559	chr3	+	192635325	192635526	True	NM_020386,NM_178496	chr3,chr3	+,-	HRASLS,MB21D2	323391,475
chr3:179323670-179324285	chr3	+	179323873	179323986	True	NM_001199958,NM_002492,NM_177988,NM_020409,NM_001199957	chr3,chr3,chr3,chr3,chr3	+,+,-,-,+	NDUFB5,NDUFB5,MRPL47,MRPL47,NDUFB5	-1349,-1349,-1439,-1439,-1349
chr12:111844624-111844857	chr12	+	111844643	111844819	True	NM_144671,NM_005475	chr12,chr12	-,+	FAM109A,SH2B3	-37718,-942
chr8:145114206-145114669	chr8	+	145114354	145114668	True	NM_019037,NM_017570	chr8,chr8	+,-	EXOSC4,OPLAH	18853,966
chr13:47469937-47470163	chr13	+	47469948	47470141	True	NM_001164213,NM_000621,NM_001165947	chr13,chr13,chr13	+,-,-	LRCH1,HTR2A,HTR2A	-342710,1079,1079
chr15:66679893-66681031	chr15	+	66679902	66680857	True	NM_002755,NM_017858	chr15,chr15	+,-	MAP2K1,TIPIN	-742,-30848
chr1:8880135-8880410	chr1	+	8880137	8880291	True	NM_001215,NM_001042681,NM_012102	chr1,chr1,chr1	+,-,-	CA6,RERE,RERE	125630,-2438,-2438
chr19:47128086-47128685	chr19	+	47128097	47128545	True	NM_033258,NM_000960,NM_005184	chr19,chr19,chr19	-,-,+	GNG8,PTGIR,CALM3	9444,51,-23636
chr7:100798405-100798644	chr7	+	100798505	100798605	True	NM_003378,NM_001283	chr7,chr7	-,+	VGF,AP1S1	10297,-877
chr19:36131052-36131488	chr19	+	36131057	36131135	True	NM_000704,NM_001863,NM_014209	chr19,chr19,chr19	-,+,+	ATP4A,COX6B1,ETV2	-76497,7989,1511
chr22:41217419-41218135	chr22	+	41217638	41217730	True	NM_001204827,NM_006358	chr22,chr22	+,-	XPNPEP3,SLC25A17	35354,-2246
chr6:25963020-25963507	chr6	+	25963065	25963523	True	NM_006355,NM_005835	chr6,chr6	+,-	TRIM38,SLC17A2	-45,-32119
chr1:55506831-55507710	chr1	+	55506844	55507526	True	NM_014762,NM_174936	chr1,chr1	-,+	DHCR24,PCSK9	-153923,-1746
chr5:55291523-55292294	chr5	+	55291607	55292010	True	NM_002184,NM_001190981,NM_175767,NM_139017	chr5,chr5,chr5,chr5	-,-,-,+	IL6ST,IL6ST,IL6ST,IL31RA	-786,-786,-786,-144325
chr16:33724249-33725036	chr16	+	33724248	33724836	True	NR_033866,NM_001205265	chr16,chr16	-,+	LOC390705,TP53TG3B	-425546,-462179
chr16:33724249-33725036	chr16	-	31999242	31999292	False	NR_002827,NM_003414	chr16,chr16	-,+	HERC2P4,ZNF267	164632,-114214
chr16:33724249-33725036	chr16	-	32942777	32942827	False	NR_003083,NM_016212	chr16,chr16	-,+	SLC6A10P,TP53TG3	-46314,262152
chr12:124475076-124476987	chr12	+	124475151	124477023	True	NM_025140,NM_001204299	chr12,chr12	-,+	CCDC92,ZNF664-FAM101A	-17988,-17447
chr2:86562693-86563751	chr2	+	86562998	86563748	True	NM_018433,NM_001164730,NM_001164731,NM_001164732,NM_022912	chr2,chr2,chr2,chr2,chr2	+,-,-,-,-	KDM3A,REEP1,REEP1,REEP1,REEP1	104522,1508,1079,1079,1079
chr16:85586583-85586828	chr16	+	85586582	85586651	True	NM_001134473,NM_016095	chr16,chr16	+,-	KIAA0182,GINS2	58377,135990
chr8:71575081-71575711	chr8	+	71575213	71575737	True	NM_016027,NM_001011720	chr8,chr8	-,+	LACTB2,XKR9	5760,5862
chr5:99870016-99870474	chr5	+	99870073	99870247	True	NR_027503,NM_198507	chr5,chr5	-,+	LOC100133050,FAM174A	-146115,876
chr12:46660345-46660722	chr12	+	46660478	46660771	True	NM_001077484,NM_030674,NM_152641	chr12,chr12,chr12	-,-,+	SLC38A1,SLC38A1,ARID2	2487,2487,-536909
chr11:111893235-111894162	chr11	+	111893389	111894187	True	NM_001931,NM_001082619	chr11,chr11	+,-	DLAT,PIH1D2	1350,50760
chr2:71295444-71295646	chr2	+	71295454	71295572	True	NM_032601,NM_017567	chr2,chr2	-,+	MCEE,NAGK	61872,-97
chr4:141184685-141185365	chr4	+	141184690	141185131	True	NM_018717,NM_032547,NR_033939	chr4,chr4,chr4	-,+,-	MAML3,SCOC,LOC100129858	-109457,-6301,109472
chr2:174831061-174831881	chr2	+	174831214	174831912	True	NM_003111,NM_001145250,NM_001017371,NM_001172712	chr2,chr2,chr2,chr2	-,+,-,-	SP3,SP9,SP3,SP3	-784,367908,-2267,-784
chr7:87301744-87303451	chr7	+	87301894	87303478	True	NM_138290,NM_000927	chr7,chr7	+,-	RUNDC3B,ABCB1	-44216,39211
chr2:198701630-198702331	chr2	+	198701827	198702326	True	NM_006226,NM_197970	chr2,chr2	+,-	PLCL1,BOLL	-32452,-50889
chr4:109530688-109531748	chr4	+	109530842	109531622	True	NR_026968,NM_000995	chr4,chr4	-,+	LOC285456,RPL34	10041,10099
chr4:109530688-109531748	chr4	-	109529512	109529577	False	NR_026968,NM_000995	chr4,chr4	-,+	LOC285456,RPL34	12101,12144
chr17:56422247-56422800	chr17	+	56422299	56422791	True	NR_027647,NM_003168	chr17,chr17	+,-	LPO,SUPT4H1	-106563,6822
chr19:38183227-38183626	chr19	+	38183239	38183443	True	NM_001172226,NM_152605	chr19,chr19	+,-	ZNF540,ZNF781	-97559,-23
chr16:10273993-10274204	chr16	+	10274104	10274174	True	NM_024997,NM_001134408,NM_001134407,NM_000833	chr16,chr16,chr16,chr16	+,-,-,-	ATF7IP2,GRIN2A,GRIN2A,GRIN2A	248550,1800,2139,2487
chr13:67932146-67934012	chr13	+	67932225	67934023	True	NR_002717,NM_203487	chr13,chr13	+,-	ATXN8OS,PCDH9	2747321,-127757
chr5:34179509-34180171	chr5	+	34179783	34179869	True	NM_016568,NR_037951	chr5,chr5	+,-	RXFP3,C1QTNF3-AMACR	-243343,-55150
chr5:34179509-34180171	chr5	-	21494528	21494578	False	NR_027026,NM_004061	chr5,chr5	+,-	GUSBP1,CDH12	-34990,1359203
chr5:34179509-34180171	chr5	+	99712070	99712447	False	NM_198507,NR_027503	chr5,chr5	+,-	FAM174A,LOC100133050	158676,11888
chr5:56777822-56778183	chr5	+	56777890	56778196	True	NM_001127236,NM_001017992	chr5,chr5	+,-	GPBP1,ACTBL2	-268040,490
chr1:110038071-110038460	chr1	+	110038117	110038455	True	NM_020703,NM_001134403,NM_001134402,NM_182580,NM_001134404,NM_001134400	chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,+,+,+	AMIGO1,CYB561D1,CYB561D1,CYB561D1,CYB561D1,CYB561D1	13931,-1467,-1510,-1467,-1467,-1467
chrX:114467915-114468291	chrX	+	114467920	114468322	True	NM_001145346,NM_020871	chrX,chrX	+,-	RBMXL3,LRCH2	-44008,363
chr17:35658386-35659225	chr17	+	35658394	35658841	True	NM_198837,NM_198838,NM_173625	chr17,chr17,chr17	-,-,+	ACACA,ACACA,C17orf78	-1702,-1702,74143
chr6:76722430-76723737	chr6	+	76722446	76723758	True	NM_001563,NM_004999	chr6,chr6	-,+	IMPG1,MYO6	58627,-263588
chr5:95010367-95011406	chr5	+	95010372	95011452	True	NM_031952,NM_173362	chr5,chr5	-,+	SPATA9,RFESD	7315,-27840
chr18:72124512-72124796	chr18	+	72124536	72124835	True	NM_001044369,NM_018235	chr18,chr18	-,+	FAM69C,CNDP2	-33,38664
chr19:50143949-50144279	chr19	+	50144043	50144283	True	NM_006270,NM_021228	chr19,chr19	-,+	RRAS,SCAF1	-643,1098
chr1:2126765-2127136	chr1	+	2126768	2127180	True	NM_003036,NM_182533,NR_024445	chr1,chr1,chr1	+,-,-	SKI,C1orf86,LOC100128003	32953,-554,-1744
chr19:35084574-35084839	chr19	+	35084637	35084831	True	NM_001025591,NM_001012320	chr19,chr19	-,+	SCGBL,ZNF302	709,83735
chr13:20355017-20356165	chr13	+	20355602	20356081	True	NM_001042414,NM_017520,NR_003272	chr13,chr13,chr13	-,+,-	PSPC1,MPHOSPH8,PSPC1	1052,-147877,1052
chr6:116693485-116694341	chr6	+	116693789	116694089	True	NM_003309,NM_013352	chr6,chr6	-,+	TSPYL1,DSE	-92509,-1738
chr19:54136404-54137055	chr19	+	54136550	54136754	True	NM_001012728,NR_002938	chr19,chr19	+,-	DPRX,LOC284379	-1301,-29799
chr16:22015784-22016146	chr16	+	22015800	22016184	True	NM_173806,NR_033694,NM_001164579	chr16,chr16,chr16	-,-,+	PDZD9,PDZD9,C16orf52	-3369,-3369,3271
chr11:65121509-65122127	chr11	+	65121596	65121904	True	NM_145719,NM_001077241	chr11,chr11	+,-	TIGD3,SLC25A45	377,28288
chr9:129886085-129887831	chr9	+	129886241	129887743	True	NM_032293,NM_012098	chr9,chr9	+,-	GARNL3,ANGPTL2	139012,-1197
chr8:67940104-67940462	chr8	+	67940105	67940383	True	NM_024790,NM_001013626	chr8,chr8	+,-	CSPP1,LRRC67	36219,453
chr19:52513009-52514232	chr19	+	52513560	52514261	True	NM_198480,NM_001199324,NM_024840	chr19,chr19,chr19	-,-,+	ZNF615,ZNF615,ZNF613	-2077,-2077,-82932
chr1:2985687-2985892	chr1	+	2985699	2985867	True	NM_022114,NR_024371,NR_015440,NM_199454	chr1,chr1,chr1,chr1	+,-,-,+	PRDM16,FLJ42875,FLJ42875,PRDM16	-8,-1410,-1410,-8
chr17:1621707-1622245	chr17	+	1621811	1622271	True	NM_001163811,NR_028503,NR_028502,NR_028505,NR_028504,NM_001164407,NM_001163809,NM_001163673,NM_152348,NR_029494	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,-,-,-,+,+,+,-	WDR81,C17orf91,C17orf91,C17orf91,C17orf91,TLCD2,WDR81,WDR81,WDR81,MIR22	5562,-2245,-2245,-2245,-2245,-8149,5853,-2045,-2045,-4530
chr12:81312920-81313305	chr12	+	81312919	81313346	True	NR_030349,NM_024560	chr12,chr12	-,+	MIR618,ACSS3	16316,158462
chr12:112038822-112039478	chr12	+	112038986	112039441	True	NM_001136538,NM_002973	chr12,chr12	+,-	ACAD10,ATXN2	84415,-1506
chr6:31435402-31436471	chr6	+	31436263	31436349	True	NR_002812,NM_006674,NR_003140	chr6,chr6,chr6	+,+,-	HCG26,HCP5,SNORD117	2656,-5357,67927
chr19:54975580-54975863	chr19	+	54975610	54975892	True	NM_198988,NM_052925,NM_145057	chr19,chr19,chr19	-,+,-	LENG9,LENG8,CDC42EP5	-716,-15596,8580
chr12:123235097-123235524	chr12	+	123235249	123235412	True	NM_032554,NM_003677	chr12,chr12	-,+	GPR81,DENR	-20120,1958
chr6:73370337-73370626	chr6	+	73370337	73370649	True	NR_036244,NM_019842	chr6,chr6	-,+	MIR4282,KCNQ5	306883,-38822
chr11:65235185-65235471	chr11	+	65235187	65235471	True	NR_030343,NM_182556	chr11,chr11	+,-	MIR612,SLC25A45	-23317,-85045
chr16:75528776-75529024	chr16	+	75528887	75529043	True	NM_007285,NM_021615	chr16,chr16	+,-	GABARAPL2,CHST6	71205,25
chr14:95195438-95196631	chr14	+	95195637	95196668	True	NR_015340,NM_173849	chr14,chr14	+,-	SERPINA13,GSC	-88626,39881
chr22:18631807-18632279	chr22	+	18631843	18632294	True	NM_001136004,NM_017414	chr22,chr22	-,+	MICAL3,USP18	-124518,463
chr12:58013898-58014156	chr12	+	58013995	58014141	True	NM_182947,NM_001478,NM_133489	chr12,chr12,chr12	+,-,+	ARHGEF25,B4GALNT1,SLC26A10	-8828,12894,-353
chr18:21038162-21039675	chr18	+	21038442	21039549	True	NM_003831,NM_032933	chr18,chr18	+,-	RIOK3,C18orf45	-5713,-20517
chr12:47172283-47174267	chr12	+	47172441	47174313	True	NM_138371,NM_001143824	chr12,chr12	+,-	FAM113B,SLC38A4	435738,45517
chrX:34674066-34674441	chrX	+	34674164	34674456	True	NM_152631,NM_031442	chrX,chrX	+,-	FAM47B,TMEM47	286456,999
chr7:1596134-1596361	chr7	+	1596197	1596297	True	NR_021487,NM_001097620	chr7,chr7	+,-	KIAA1908,TMEM184A	13411,-131
chr19:56247144-56247679	chr19	+	56247341	56247446	True	NM_001145014,NM_176820	chr19,chr19	+,-	RFPL4A,NLRP9	23060,2377
chr12:123458514-123458865	chr12	+	123458606	123458876	True	NM_203444,NM_024623,NM_018694,NM_001002251,NM_001002252,NM_019625,NM_019624,NM_016638	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,+,+,-,-,+	ABCB9,OGFOD2,ARL6IP4,ARL6IP4,ARL6IP4,ABCB9,ABCB9,ARL6IP4	926,477,6003,6003,6003,-7550,-7550,6003
chr19:48015992-48017196	chr19	+	48015991	48016873	True	NM_015711,NM_003827	chr19,chr19	+,-	GLTSCR1,NAPA	94579,1676
chr2:175197565-175198029	chr2	+	175197667	175198067	True	NM_001145250,NM_004882	chr2,chr2	+,-	SP9,CIR1	1753,62426
chr19:39575087-39575312	chr19	+	39575098	39575316	True	NM_178820,NM_001004318	chr19,chr19	-,+	FBXO27,PAPL	-51900,-204
chr12:7261904-7262144	chr12	+	7261996	7262112	True	NR_026947,NM_016546	chr12,chr12	+,-	LOC283314,C1RL	-1143,-127
chr11:47615896-47616495	chr11	+	47616073	47616449	True	NM_001164379,NM_031909	chr11,chr11	+,-	FAM180B,C1QTNF4	-7894,-112
chr3:186285326-186285725	chr3	+	186285342	186285760	True	NM_016306,NM_001134415,NM_018138	chr3,chr3,chr3	+,-,-	DNAJB11,TBCCD1,TBCCD1	2706,2622,-201
chr3:57929181-57930137	chr3	+	57929262	57930174	True	NM_001164317,NM_152678	chr3,chr3	+,-	FLNB,FAM116A	63952,-250446
chr11:108338866-108339730	chr11	+	108338925	108339462	True	NM_004398,NM_152587	chr11,chr11	+,-	DDX10,C11orf65	196353,-667
chr19:46917543-46918177	chr19	+	46917622	46917970	True	NM_006247,NM_032040	chr19,chr19	+,-	PPP5C,CCDC8	-67429,-703
chr14:105389782-105390193	chr14	+	105389945	105390235	True	NM_138420,NM_138790	chr14,chr14	-,+	AHNAK2,PLD4	54509,951
chr10:101837325-101837637	chr10	+	101837324	101837594	True	NR_024130,NM_001308	chr10,chr10	+,-	DNMBP-AS1,CPN1	-150417,4106
chr4:86891952-86893413	chr4	+	86892336	86893446	True	NM_031305,NM_138981	chr4,chr4	+,-	ARHGAP24,MAPK10	-40962,135410
chr1:115258934-115259322	chr1	+	115259190	115259340	True	NM_003176,NM_002524	chr1,chr1	+,-	SYCP1,NRAS	138114,225
chr2:152208944-152210261	chr2	+	152208970	152210102	True	NM_007115,NM_004688	chr2,chr2	+,-	TNFAIP6,NMI	4003,-62540
chr6:13573404-13573778	chr6	+	13573407	13573765	True	NM_018988,NM_012241,NM_031244,NM_001193267	chr6,chr6,chr6,chr6	-,+,+,+	GFOD1,SIRT5,SIRT5,SIRT5	-85620,1109,1026,1026
chr12:129339335-129340388	chr12	+	129339356	129340168	True	NM_145648,NM_144669	chr12,chr12	-,+	SLC15A4,GLT1D1	-30815,-1333
chr9:139971347-139971588	chr9	+	139971351	139971535	True	NM_207309,NM_178448,NM_016219,NR_027447	chr9,chr9,chr9,chr9	+,-,+,-	UAP1L1,C9orf140,MAN1B1,LOC100289341	417,-6323,9881,9784
chr19:7968026-7968747	chr19	+	7968050	7968582	True	NR_033250,NM_206833,NM_145185	chr19,chr19,chr19	-,-,+	LOC388499,CTXN1,MAP2K7	-22933,22519,182
chr11:18287645-18289436	chr11	+	18287737	18289337	True	NM_000331,NM_001178006,NM_199161,NM_030754	chr11,chr11,chr11,chr11	+,+,+,-	SAA1,SAA1,SAA1,SAA2	20,20,20,-17516
chr11:18287645-18289436	chr11	-	18268829	18269665	False	NM_001127380,NM_001199744,NM_030754,NM_000331	chr11,chr11,chr11,chr11	-,-,-,+	SAA2,SAA2-SAA4,SAA2,SAA1	607,607,607,18142
chr12:53208323-53209157	chr12	+	53208392	53209087	True	NM_199187,NM_002272	chr12,chr12	+,-	KRT18,KRT4	133567,-57
chr19:16830737-16831523	chr19	+	16830782	16831278	True	NM_001007525,NM_024104	chr19,chr19	+,-	NWD1,C19orf42	-46,-59814
chr7:39772357-39772649	chr7	+	39772379	39772693	True	NM_138701,NR_026999	chr7,chr7	-,+	C7orf11,NCRNA00265	401608,473
chr19:12780477-12780728	chr19	+	12780514	12780734	True	NM_001099737,NM_001173498,NM_032332,NM_000528,NM_016145,NR_029375	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,-,-,+	WDR83,MAN2B1,WDR83,MAN2B1,C19orf56,WDR83	-2947,-2923,-48,-2923,-49,-2947
chr4:1725236-1725574	chr4	+	1725270	1725570	True	NM_001127266,NM_006342,NM_138385	chr4,chr4,chr4	-,+,-	TMEM129,TACC3,TMEM129	-2186,-2055,-2186
chr17:10102488-10102694	chr17	+	10102493	10102741	True	NM_201433,NM_004246	chr17,chr17	-,+	GAS7,GLP2R	-625,-373163
chr7:5254864-5255149	chr7	+	5255032	5255158	True	NM_001033520,NR_034163	chr7,chr7	+,-	WIPI2,ZNF890P	-1183,-70855
chr19:33870381-33872193	chr19	+	33870524	33872226	True	NM_001806,NM_004364	chr19,chr19	+,-	CEBPG,CEBPA	-5966,-77094
chr1:77749123-77751022	chr1	+	77749289	77750977	True	NM_174858,NM_012093,NM_005482	chr1,chr1,chr1	+,+,-	AK5,AK5,PIGK	-1678,-1053,-64157
chr3:36903985-36905879	chr3	+	36904137	36905854	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	80744,128986
chr14:102192053-102192618	chr14	+	102192301	102192597	True	NR_026774,NR_031649	chr14,chr14	+,-	NCRNA00239,MIR1247	4176,-165542
chr14:65876426-65878356	chr14	+	65876494	65878290	True	NM_178155,NM_178154,NR_024334,NM_178156,NM_004480	chr14,chr14,chr14,chr14,chr14	+,+,-,+,+	FUT8,FUT8,LOC645431,FUT8,FUT8	-38,1244,1096,-38,1244
chr12:5513996-5514420	chr12	+	5513997	5514445	True	NM_020373,NM_001102654	chr12,chr12	-,+	ANO2,NTF3	541003,26834
chr11:94275749-94276722	chr11	+	94276217	94276739	True	NM_005591,NM_002033	chr11,chr11	-,+	MRE11A,FUT4	-49177,277
chr1:155209974-155210604	chr1	+	155210318	155210644	True	NM_000157,NM_001171812,NM_001171811,NM_198883,NM_001005742,NM_001005741	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,-	GBA,GBA,GBA,MTX1,GBA,GBA	475,472,4059,-31879,4059,4059
chr1:155209974-155210604	chr1	+	155188080	155188134	False	NM_002455,NR_002188,NM_198883	chr1,chr1,chr1	+,-,+	MTX1,GBAP1,MTX1	-9641,9241,-9641
chr1:155101447-155102885	chr1	+	155101675	155102749	True	NM_004428,NM_018973,NM_018845,NM_001122839,NM_001122837,NM_182685	chr1,chr1,chr1,chr1,chr1,chr1	+,-,+,+,+,+	EFNA1,DPM3,SLC50A1,SLC50A1,SLC50A1,EFNA1	-1377,10184,5538,5538,5538,-1377
chr19:32832608-32834271	chr19	+	32832656	32834085	True	NM_014910,NM_001136156,NM_032139	chr19,chr19,chr19	+,+,-	ZNF507,ZNF507,ANKRD27	2428,2428,332067
chr12:111808135-111808533	chr12	+	111808341	111808425	True	NM_001177996,NM_001177997,NM_005475,NM_144671	chr12,chr12,chr12,chr12	-,-,+,-	FAM109A,FAM109A,SH2B3,FAM109A	-1416,-1416,35326,-1416
chr22:25170890-25171558	chr22	+	25171163	25171409	True	NM_001008496,NR_001283	chr22,chr22	-,+	PIWIL3,TOP1P2	-480,-10758
chr18:21843690-21845682	chr18	+	21844061	21845679	True	NR_031724,NM_018030	chr18,chr18	+,-	MIR320C2,OSBPL1A	55970,6567
chr17:3511774-3512344	chr17	+	3511850	3512198	True	NM_080704,NM_001031681	chr17,chr17	-,+	TRPV1,CTNS	565,27563
chr13:114102944-114103475	chr13	+	114103108	114103439	True	NM_017905,NM_138430,NM_199162	chr13,chr13,chr13	+,-,-	TMCO3,ADPRHL1,ADPRHL1	41868,4450,68
chr10:5734221-5734708	chr10	+	5734220	5734592	True	NM_017782,NR_037164	chr10,chr10	+,-	C10orf18,ASB13	-7470,-25662
chr1:109396275-109397957	chr1	+	109396569	109397588	True	NM_152763,NR_034168	chr1,chr1	-,+	AKNAD1,LOC642864	2179,2250
chr17:28623361-28623643	chr17	+	28623457	28623615	True	NM_001304,NM_000386	chr17,chr17	+,-	CPD,BLMH	82326,-4273
chrX:1389338-1389788	chrY	+	1339450	1339600	False	NM_172249,NM_001161529,NM_006140,NM_001161532,NM_022148,NM_172246,NM_172245,NR_027760,NM_001161531	chrY,chrY,chrY,chrY,chrY,chrY,chrY,chrY,chrY	+,+,+,+,-,+,+,+,+	CSF2RA,CSF2RA,CSF2RA,CSF2RA,CRLF2,CSF2RA,CSF2RA,CSF2RA,CSF2RA	-1819,-1819,-1819,-1819,-57920,-1819,-1819,-1819,-1819
chrX:1389338-1389788	chrX	+	1389450	1389600	True	NM_172249,NM_001161529,NM_006140,NM_001161532,NM_022148,NM_172246,NM_172245,NR_027760,NM_001161531	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,-,+,+,+,+	CSF2RA,CSF2RA,CSF2RA,CSF2RA,CRLF2,CSF2RA,CSF2RA,CSF2RA,CSF2RA	-1819,-1819,-1819,-1819,-57920,-1819,-1819,-1819,-1819
chr3:128599523-128600275	chr3	+	128599598	128600312	True	NR_034179,NM_014049,NR_033426	chr3,chr3,chr3	-,+,+	LOC653712,ACAD9,ACAD9	-9214,-1317,-1317
chr19:12479288-12480152	chr19	+	12479305	12480161	True	NM_003437,NM_030824	chr19,chr19	+,-	ZNF136,ZNF442	-205486,-2830
chr20:61491354-61492091	chr20	+	61491459	61492117	True	NM_006602,NM_080750	chr20,chr20	-,+	TCFL5,DPH3P1	1048,-15045
chr11:82786538-82787661	chr11	+	82786584	82787458	True	NM_015885,NM_014488	chr11,chr11	+,-	PCF11,RAB30	80678,-3700
chr12:14927130-14927343	chr12	+	14927134	14927380	True	NM_177925,NR_027716,NM_175054	chr12,chr12,chr12	+,+,-	H2AFJ,H2AFJ,HIST4H4	63,63,-3069
chr11:123614867-123615623	chr11	+	123615275	123615653	True	NM_003455,NM_001005188,NM_001005197	chr11,chr11,chr11	-,-,+	ZNF202,OR6X1,OR8D4	-2912,9623,161485
chr2:201817277-201818846	chr2	+	201817410	201818513	True	NR_033915,NM_001142356,NM_006190	chr2,chr2,chr2	-,+,-	ORC2,NIF3L1,ORC2	9968,-60832,9968
chr5:760930-761201	chr5	+	761004	761220	True	NM_001166260,NM_007030	chr5,chr5	+,-	TRIP13,TPPP	131748,-67494
chr1:222914559-222915441	chr1	+	222914691	222915497	True	NM_207468,NM_022831	chr1,chr1	+,-	FAM177B,AIDA	-4187,-28827
chr4:114037635-114038150	chr4	+	114037696	114038096	True	NR_031641,NR_029857	chr4,chr4	+,-	MIR1243,MIR302B	-9733,-467983
chr22:21127097-21128770	chr22	+	21127760	21128740	True	NM_002650,NM_000185	chr22,chr22	-,+	PI4KA,SERPIND1	-38805,-2
chr15:89178138-89179537	chr15	+	89178137	89179526	True	NR_026645,NM_002201	chr15,chr15	-,+	DET1,ISG20	-88225,2512
chr1:44452531-44454373	chr1	+	44452879	44453877	True	NM_003780,NM_001005417,NM_152499,NM_006934	chr1,chr1,chr1,chr1	+,+,+,-	B4GALT2,B4GALT2,CCDC24,SLC6A9	-8065,-6748,3402,29170
chr15:40885526-40886104	chr15	+	40885534	40886144	True	NM_144508,NM_052849,NM_170589	chr15,chr15,chr15	+,-,+	CASC5,C15orf57,CASC5	302,-28282,302
chrY:14503933-14504267	chrY	+	14503951	14504231	True	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	270066,29208
chr15:74657537-74658037	chr15	+	74657567	74657923	True	NM_001099773,NM_182791,NM_000781	chr15,chr15,chr15	-,+,-	CYP11A1,CCDC33,CYP11A1	680,-46718,2208
chr13:21344681-21345869	chr13	+	21344700	21345809	True	NM_138284,NM_174928	chr13,chr13	+,-	IL17D,N6AMT2	-67284,2305
chr15:43980634-43981960	chr15	+	43980674	43981632	True	NM_001015001,NM_172097	chr15,chr15	+,-	CKMT1A,CATSPER2	3451,-39635
chr15:43980634-43981960	chr15	+	43880842	43881800	False	NM_001190214,NM_014659,NM_001130858,NM_001130859,NM_020990	chr15,chr15,chr15,chr15,chr15	-,-,-,-,+	PPIP5K1,PPIP5K1,PPIP5K1,PPIP5K1,CKMT1B	702,-3752,702,702,3451
chr7:55087429-55087648	chr7	+	55087498	55087666	True	NM_201284,NM_005228,NM_014302,NM_201282,NM_201283	chr7,chr7,chr7,chr7,chr7	+,+,-,+,+	EGFR,EGFR,SEC61G,EGFR,EGFR	-824,-824,-260559,-824,-824
chr4:1202252-1202727	chr4	+	1202448	1202636	True	NM_001199021,NR_033339,NR_024569	chr4,chr4,chr4	-,+,-	SPON2,C4orf42,LOC100130872	164,40591,164
chr19:497353-497676	chr19	+	497388	497702	True	NM_033513,NM_130762,NM_182577,NM_130760	chr19,chr19,chr19,chr19	+,+,-,+	C19orf20,MADCAM1,ODF3L2,MADCAM1	9794,-949,-22405,-949
chr4:73929937-73930997	chr4	+	73930079	73930984	True	NM_000477,NM_173827	chr4,chr4	+,-	ALB,COX18	338987,4545
chr21:40751101-40751430	chr21	+	40751225	40751337	True	NM_004627,NM_004965,NM_001146218	chr21,chr21,chr21	+,-,+	WRB,HMGN1,WRB	875,-30178,8354
chr13:99404089-99404552	chr13	+	99404182	99404588	True	NM_005073,NM_001144072	chr13,chr13	-,+	SLC15A1,UBAC2	391,448090
chr6:133564180-133564757	chr6	+	133564253	133564781	True	NM_172105,NM_052831,NM_004100,NM_172103	chr6,chr6,chr6,chr6	+,-,+,+	EYA4,C6orf192,EYA4,EYA4	-1809,-444506,-1809,-1809
chr22:25961339-25961548	chr22	+	25961369	25961563	True	NM_001135772,NM_005160	chr22,chr22	-,+	LRP5L,ADRBK2	-183825,-559
chr15:90743888-90744312	chr15	+	90743890	90744168	True	NM_198925,NM_006384	chr15,chr15	+,-	SEMA4B,CIB1	393,33161
chr1:211755751-211756424	chr1	+	211756101	211756472	True	NM_021194,NR_026761	chr1,chr1	-,+	SLC30A1,C1orf97	-4002,-200062
chr17:49225915-49226269	chr17	+	49226013	49226073	True	NM_001018136,NM_198175,NM_000269,NR_037149,NM_003971	chr17,chr17,chr17,chr17,chr17	+,+,+,+,-	NME1-NME2,NME1,NME1,NME1-NME2,SPAG9	4823,4846,4846,4823,-27787
chr19:41035940-41036156	chr19	+	41036026	41036086	True	NM_025213,NM_000713	chr19,chr19	+,-	SPTBN4,BLVRB	308,-64301
chrX:153287595-153287795	chrX	+	153287666	153287840	True	NR_031757,NM_001569,NR_036174,NM_001025242,NM_001025243	chrX,chrX,chrX,chrX,chrX	-,-,+,-,-	MIR718,IRAK1,MIR3202-1,IRAK1,IRAK1	-2226,-2324,-41169,-2324,-2324
chr11:1644761-1645443	chr11	+	1644868	1645491	True	NM_001012709,NM_001001480	chr11,chr11	-,+	KRTAP5-4,KRTAP5-5	-1500,5541
chr3:124638726-124639509	chr3	+	124638740	124639507	True	NM_033049,NR_033437	chr3,chr3	-,+	MUC13,UMPS	14140,-189578
chr17:62493281-62493650	chr17	+	62493347	62493597	True	NM_138363,NM_007215,NM_004396	chr17,chr17,chr17	+,-,-	CCDC45,POLG2,DDX5	9560,-163,8937
chr19:47291233-47291487	chr19	+	47291279	47291501	True	NM_001145144,NM_001145145,NM_005628,NM_024301	chr19,chr19,chr19,chr19	-,-,-,+	SLC1A5,SLC1A5,SLC1A5,FKRP	-734,-3145,391,-42027
chr19:57349819-57350079	chr19	+	57349896	57350078	True	NM_006210,NM_001146187,NM_001146326,NM_001146185,NM_001146184,NM_001146327,NR_024059,NM_015363	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,+,-	PEG3,PEG3,ZIM2,PEG3,PEG3,ZIM2,MIMT1,ZIM2	2066,2066,2069,2066,2066,2069,2191,2069
chr22:33448305-33449128	chr22	+	33448466	33449121	True	NM_000362,NM_001135774	chr22,chr22	+,-	TIMP3,SYN3	-251715,5309
chr1:211556409-211557757	chr1	+	211556466	211557590	True	NM_001164688,NR_026761	chr1,chr1	-,+	RD3,C1orf97	108719,-420
chr1:156049923-156050244	chr1	+	156050003	156050255	True	NM_001093725,NM_020387	chr1,chr1	-,+	MEX3A,RAB25	1584,-19097
chr6:3749400-3750656	chr6	+	3749464	3750400	True	NM_183373,NM_012135	chr6,chr6	-,+	C6orf145,FAM50B	1904,99231
chr10:74035337-74035650	chr10	+	74035365	74035583	True	NM_001198800,NM_019058	chr10,chr10	-,+	ASCC1,DDIT4	-59182,-1739
chr2:234984917-234986310	chr2	+	234984985	234985945	True	NM_006944,NR_024322	chr2,chr2	+,-	SPP2,MSL3P1	-25690,-207930
chr21:22378593-22380062	chr21	+	22378880	22380021	True	NM_004540,NR_024090	chr21,chr21	+,-	NCAM2,C21orf131	-8306,-203454
chr14:35008825-35009230	chr14	+	35008840	35008914	True	NM_018453,NR_002937	chr14,chr14	-,+	EAPP,C14orf19	79,400213
chr22:37098436-37099276	chr22	+	37098436	37099148	True	NM_006078,NM_000631	chr22,chr22	-,+	CACNG2,NCF4	64,157881
chr2:105944538-105944953	chr2	+	105944593	105944953	True	NM_001142621,NM_004257,NM_024093	chr2,chr2,chr2	-,-,+	TGFBRAP1,TGFBRAP1,C2orf49	1245,1245,9059
chr12:109253536-109254461	chr12	+	109253830	109254423	True	NM_001917,NM_001161330,NM_018984	chr12,chr12,chr12	+,-,-	DAO,SSH1,SSH1	19433,-2471,-2471
chr8:33423999-33424204	chr8	+	33424013	33424157	True	NM_024787,NM_032509	chr8,chr8	-,+	RNF122,MAK16	536,-81379
chr12:113575331-113576004	chr12	+	113575552	113576037	True	NM_001144872,NM_001193521,NM_004658,NM_001193520	chr12,chr12,chr12,chr12	+,-,-,-	CCDC42B,RASAL1,RASAL1,RASAL1	11625,-1993,-1508,-1508
chr15:25225686-25225927	chr15	+	25225860	25225991	True	NR_022008,NR_022011,NM_130838,NR_001292,NR_001293,NR_001294	chr15,chr15,chr15,chr15,chr15,chr15	+,+,-,+,+,+	PAR5,PAR-SN,UBE3A,SNORD108,SNORD107,SNORD64	4015,1149,424727,6080,1149,4255
chr8:42066709-42068165	chr8	+	42067089	42068151	True	NM_006803,NM_033011,NM_000930	chr8,chr8,chr8	+,-,-	AP3M2,PLAT,PLAT	-56677,-1895,-1895
chr3:164708521-164709835	chr3	+	164708855	164709672	True	NM_001041,NM_001122752	chr3,chr3	-,+	SI,SERPINI1	86672,2743759
chr10:44065751-44067097	chr10	+	44065800	44066984	True	NM_005674,NM_001099283,NM_001099282,NM_145312,NM_001099284	chr10,chr10,chr10,chr10,chr10	-,-,-,+,-	ZNF239,ZNF239,ZNF239,ZNF485,ZNF239	-1893,3133,3132,34870,3133
chr3:59016708-59018086	chr3	+	59016864	59017648	True	NM_198463,NM_153331	chr3,chr3	-,+	C3orf67,KCTD6	18127,-532828
chr1:15913907-15914575	chr1	+	15913948	15914120	True	NM_032341,NM_024758	chr1,chr1	+,-	DDI2,AGMAT	29832,-2343
chr12:1057940-1058262	chr12	+	1058143	1058223	True	NM_134424,NM_178039	chr12,chr12	-,+	RAD52,ERC1	700,42180
chr19:49149123-49149651	chr19	+	49149132	49149282	True	NM_001217,NM_001352,NR_004401	chr19,chr19,chr19	-,-,+	CA11,DBP,SEC1	219,-8493,-7887
chr3:165510130-165511757	chr3	+	165510212	165511544	True	NM_000055,NM_001122752	chr3,chr3	-,+	BCHE,SERPINI1	43759,1941887
chr20:34042130-34042380	chr20	+	34042305	34042427	True	NM_007186,NM_000557	chr20,chr20	+,-	CEP250,GDF5	795,-16278
chr9:131266091-131266837	chr9	+	131266188	131266838	True	NM_001003722,NM_001499,NR_029837	chr9,chr9,chr9	+,+,-	GLE1,GLE1,MIR219-2	132,132,-111195
chr6:46015005-46016519	chr6	+	46015052	46016518	True	NM_016929,NM_001114086,NM_014936	chr6,chr6,chr6	-,-,+	CLIC5,CLIC5,ENPP4	-31455,31617,81182
chr19:50885356-50885914	chr19	+	50885373	50885859	True	NM_007121,NM_002691,NM_004851	chr19,chr19,chr19	+,+,-	NR1H2,POLD1,NAPSA	-5739,1733,-16442
chr15:79301529-79301938	chr15	+	79301543	79301853	True	NM_153815,NM_206839	chr15,chr15	-,+	RASGRF1,MORF4L1	-3541,-136427
chr19:52547237-52548700	chr19	+	52547422	52548568	True	NM_024840,NM_014650	chr19,chr19	+,-	ZNF613,ZNF432	-116801,3568
chr11:107879175-107879505	chr11	+	107879176	107879513	True	NM_017515,NM_003478	chr11,chr11	-,+	SLC35F2,CUL5	-149262,-62
chr6:25665926-25666438	chr6	+	25665994	25666176	True	NM_170745,NM_006998	chr6,chr6	-,+	HIST1H2AA,SCGN	60664,-13630
chr17:38522769-38523374	chr17	+	38522769	38523065	True	NM_001024809,NM_152219	chr17,chr17	+,-	RARA,GJD3	-24549,-1824
chr8:42231140-42232778	chr8	+	42231431	42232529	True	NM_014420,NM_001135694	chr8,chr8	-,+	DKK4,VDAC3	2195,16816
chr14:74108464-74109550	chr14	+	74108684	74109322	True	NM_031427,NM_001201366,NM_006029	chr14,chr14,chr14	+,+,-	DNAL1,DNAL1,PNMA1	2255,2255,71862
chr17:58678994-58679415	chr17	+	58679149	58679432	True	NM_003620,NM_006380	chr17,chr17	+,-	PPM1D,APPBP2	-1670,-75569
chr9:5429578-5431388	chr9	+	5429854	5430976	True	NM_014143,NM_018465	chr9,chr9	+,-	CD274,C9orf46	19526,6942
chr2:175489854-175490138	chr2	+	175489866	175490177	True	NM_003387,NM_024583	chr2,chr2	-,+	WIPF1,SCRN3	9181,-229460
chr12:32120724-32121449	chr12	+	32120802	32121382	True	NM_018169,NM_001013699	chr12,chr12	+,-	C12orf35,H3F3C	-8508,-175627
chr5:177614357-177614773	chr5	+	177614403	177614465	True	NR_003281,NM_004499	chr5,chr5	-,+	GMCL1L,HNRNPAB	18,17042
chr15:64792078-64792305	chr15	+	64792080	64792278	True	NM_015042,NM_014736	chr15,chr15	+,-	ZNF609,KIAA0101	-512,-118378
chr7:148789889-148790377	chr7	+	148790250	148790420	True	NM_152411,NM_020781	chr7,chr7	-,+	ZNF786,ZNF398	-2381,33087
chr14:41211147-41211529	chr14	+	41211257	41211557	True	NM_152447,NM_203301	chr14,chr14	+,-	LRFN5,FBXO33	865206,-1309553
chr6:42121620-42121844	chr6	+	42121712	42121886	True	NM_001164446,NM_000409	chr6,chr6	-,+	C6orf132,GUCA1A	-10997,1257
chr15:22567171-22568103	chr15	+	22567170	22568152	True	NR_027407,NR_033735	chr15,chr15	-,+	GOLGA8DP,REREP3	147634,-20656
chr19:39904443-39905792	chr19	+	39904452	39905442	True	NM_003407,NM_001020,NM_022835	chr19,chr19,chr19	+,-,+	ZFP36,RPS16,PLEKHG2	-7016,21226,-753
chr15:78449745-78450909	chr15	+	78449877	78450720	True	NM_006383,NM_005530	chr15,chr15	-,+	CIB2,IDH3A	-25999,-8217
chr8:87356565-87357153	chr8	+	87356721	87357162	True	NM_007013,NM_138817	chr8,chr8	+,-	WWP1,SLC7A13	-1791,-114117
chr7:128434267-128434528	chr7	+	128434284	128434526	True	NM_001201372,NM_001708,NM_022742	chr7,chr7,chr7	+,-,+	CCDC136,OPN1SW,CCDC136	-2871,-18440,-2285
chr10:60124256-60124950	chr10	+	60124325	60124817	True	NM_152230,NM_003201	chr10,chr10	-,+	IPMK,TFAM	-96631,20358
chrY:3443876-3444138	chrY	+	3443875	3443961	True	NM_003140,NM_139214	chrY,chrY	-,+	SRY,TGIF2LY	-788083,3164
chrY:3443876-3444138	chrX	+	89173689	89173775	False	NM_138960,NM_004538	chrX,chrX	+,-	TGIF2LX,NAP1L3	3164,3754965
chr12:123595253-123595487	chr12	+	123595263	123595495	True	NM_020845,NM_152269	chr12,chr12	-,+	PITPNM2,C12orf65	-288,122348
chr11:64127030-64127457	chr11	+	64127064	64127368	True	NM_003942,NR_031602,NM_001006944,NM_016404	chr11,chr11,chr11,chr11	+,+,+,-	RPS6KA4,MIR1237,RPS6KA4,TRMT112	-490,8705,-490,-42031
chrX:82759060-82759907	chrX	+	82759179	82759897	True	NM_014496,NM_000307	chrX,chrX	-,+	RPS6KA6,POU3F4	683096,3371
chr5:176934898-176935236	chr5	+	176935069	176935155	True	NM_001144875,NM_001174102,NM_024872,NM_001144876,NM_016222	chr5,chr5,chr5,chr5,chr5	-,+,-,-,-	DOK3,PRR7,DOK3,DOK3,DDX41	2322,-59794,1753,2322,8862
chr2:185462336-185462857	chr2	+	185462337	185462905	True	NM_194250,NM_205842	chr2,chr2	+,-	ZNF804A,NCKAP1	187,-1559108
chr15:85116895-85118332	chr15	+	85117244	85118200	True	NM_017894,NR_003661	chr15,chr15	+,-	ZSCAN2,UBE2Q2P1	26048,-3218
chr17:26686354-26686648	chr17	+	26686367	26686655	True	NM_001080837,NM_015584,NM_152464	chr17,chr17,chr17	-,-,+	SEBOX,POLDIP2,TMEM199	5660,-1764,-1731
chr15:41708398-41708810	chr15	+	41708674	41708846	True	NM_016013,NM_015138	chr15,chr15	-,+	NDUFAF1,RTF1	-14032,455
chr9:136084742-136085283	chr9	+	136084804	136085246	True	NM_014581,NR_001275	chr9,chr9	-,+	OBP2B,CELP	-176,-126929
chr19:40919588-40919792	chr19	+	40919606	40919828	True	NM_181882,NM_020971,NM_020956	chr19,chr19,chr19	-,+,-	PRX,SPTBN4,PRX	-335,53297,-335
chr16:81071020-81071330	chr16	+	81071025	81071185	True	NM_020188,NM_015251	chr16,chr16	-,+	C16orf61,ATMIN	-30523,-1618
chr2:112254942-112256900	chr2	+	112254971	112256588	True	NR_024373,NM_207003,NR_015395	chr2,chr2,chr2	-,+,-	LOC541471,BCL2L11,LOC541471	-2279,-376531,-2279
chr2:112254942-112256900	chr2	-	87751034	87752325	False	NM_001078170,NR_024206,NR_024204,NR_024205	chr2,chr2,chr2,chr2	-,+,+,+	RGPD2,NCRNA00152,NCRNA00152,NCRNA00152	373011,2648,2648,2648
chr7:27196187-27196426	chr7	+	27196187	27196417	True	NM_152739,NR_002795,NM_024014,NM_006896	chr7,chr7,chr7,chr7	-,+,-,-	HOXA9,HOXA11-AS1,HOXA6,HOXA7	8782,28609,-8819,13
chr4:88227784-88228755	chr4	+	88228263	88228646	True	NM_001136230,NM_024047	chr4,chr4	-,+	HSD17B13,NUDT9	15467,115088
chr8:143998067-143998340	chr8	+	143998165	143998253	True	NM_000498,NM_002066	chr8,chr8	-,+	CYP11B2,GML	1056,-81999
chr3:111575340-111575602	chr3	+	111575422	111575642	True	NM_024508,NM_145753,NM_001134438,NM_001134439	chr3,chr3,chr3,chr3	-,+,+,+	ZBED2,PHLDB2,PHLDB2,PHLDB2	-261256,2384,2384,2925
chr17:15899471-15899680	chr17	+	15899639	15899705	True	NM_001042698,NR_037985,NM_017775,NM_001042697	chr17,chr17,chr17,chr17	-,+,+,-	ZSWIM7,TTC19,TTC19,ZSWIM7	3351,2988,2988,3351
chr17:4806451-4807243	chr17	+	4806695	4807091	True	NM_000080,NM_001145536	chr17,chr17	-,+	CHRNE,C17orf107	-326,-3798
chr11:102594792-102595298	chr11	+	102594833	102595336	True	NM_001166,NM_002424	chr11,chr11	+,-	BIRC2,MMP8	-376930,399
chr6:33286253-33286821	chr6_qbl_hap6	+	4518530	4518982	False	NM_001145338,NM_001350,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	-564,4110,4110,-28930,-771,-4120,-4120,-4120,4110
chr6:33286253-33286821	chr6_mcf_hap5	+	4760025	4760475	False	NM_001145338,NM_001350,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	-563,4110,4110,-28924,-770,-4119,-4119,-4119,4110
chr6:33286253-33286821	chr6_cox_hap2	+	4730096	4730549	False	NM_001145338,NM_001350,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	-562,4112,4112,-28925,-769,-4120,-4120,-4120,4112
chr6:33286253-33286821	chr6	+	33286282	33286733	True	NM_001145338,NM_001350,NR_024517,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	-563,4110,4110,4110,-28925,-770,-4118,-4118,-4118,4110
chr6:33286253-33286821	chr6_dbb_hap3	+	4567605	4568058	False	NM_001145338,NM_001350,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	-562,4112,4112,-28922,-769,-4118,-4118,-4118,4112
chr19:11452822-11454383	chr19	+	11453305	11454171	True	NM_001080503,NM_001145416,NM_033408,NM_004283,NM_198536	chr19,chr19,chr19,chr19,chr19	+,-,-,-,-	CCDC159,TMEM205,TMEM205,RAB3D,TMEM205	3009,2860,2860,-2961,2860
chr3:9004662-9004890	chr3	+	9004668	9004934	True	NM_020165,NM_001234	chr3,chr3	-,+	RAD18,CAV3	275,-229235
chr1:204909300-204910669	chr1	+	204909610	204910593	True	NM_203376,NM_001160331	chr1,chr1	-,+	TMEM81,NFASC	143058,2760
chr5:38544477-38545226	chr5	+	38544604	38544884	True	NM_001127671,NM_182801	chr5,chr5	-,+	LIFR,EGFLAM	11914,-99019
chr17:38256708-38256919	chr17	+	38256713	38256875	True	NM_001012241,NM_021724	chr17,chr17	+,-	MSL1,NR1D1	21914,148
chrX:50211410-50211825	chrX	+	50211441	50211863	True	NM_033670,NM_001013742	chrX,chrX	+,-	CCNB3,DGKK	-183952,1908
chr6:69354554-69355008	chr6	+	69354574	69355024	True	NM_018368,NM_001704	chr6,chr6	-,+	LMBRD1,BAI3	1152075,-9001
chr10:135052095-135052796	chr10	+	135052204	135052646	True	NR_030170,NM_014468,NM_003577	chr10,chr10,chr10	-,+,+	MIR202,VENTX,UTF1	8528,-848,-8478
chr6:78518592-78520146	chr6	+	78518597	78520185	True	NM_000863,NM_001010844	chr6,chr6	-,+	HTR1B,IRAK1BP1	-345477,1057003
chr21:42690033-42690384	chr21	+	42690066	42690382	True	NM_058186,NM_206964,NM_182832	chr21,chr21,chr21	+,+,-	FAM3B,FAM3B,PLAC4	-1456,-1456,-132900
chr2:231858842-231859780	chr2	+	231858901	231859612	True	NR_033879,NM_139073	chr2,chr2	-,+	LOC348761,SPATA3	1192,1226
chr5:5144079-5144808	chr5	+	5144363	5144827	True	NM_139056,NR_028351	chr5,chr5	+,-	ADAMTS16,FLJ33360	-3978,1192628
chr1:224541304-224542909	chr1	+	224541306	224542388	True	NM_014184,NM_206840	chr1,chr1	+,-	CNIH4,NVL	2206,-23434
chr1:85125403-85126604	chr1	+	85125766	85126223	True	NR_027379,NR_036561	chr1,chr1	-,+	C1orf180,SPATA1	-25063,-153858
chr11:118928339-118928757	chr11	+	118928343	118928714	True	NM_021729,NM_006389,NM_001130991	chr11,chr11,chr11	+,-,-	VPS11,HYOU1,HYOU1	9778,-427,-418
chr17:18855691-18855985	chr17	+	18855710	18855980	True	NM_001042450,NM_001039999,NM_152351	chr17,chr17,chr17	+,-,+	SLC5A10,FAM83G,SLC5A10	-283,52130,-283
chr16:65157880-65158159	chr16	+	65157884	65158149	True	NM_001795,NM_001797	chr16,chr16	+,-	CDH5,CDH11	1242375,-1965
chr19:49975752-49976436	chr19	+	49976071	49976437	True	NM_001204502,NM_001204503,NM_001459,NM_017916	chr19,chr19,chr19,chr19	+,+,+,-	FLT3LG,FLT3LG,FLT3LG,PIH1D1	1028,1380,1028,-20956
chr19:36056673-36057809	chr19	+	36057396	36057858	True	NM_000704,NM_032635	chr19,chr19	-,+	ATP4A,TMEM147	-2836,-20912
chr17:79335681-79336509	chr17	+	79336359	79336557	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	36982,-31885
chr11:67407575-67407992	chr11	+	67407574	67408028	True	NM_007103,NM_005995	chr11,chr11	+,-	NDUFV1,TBX10	-33302,-543
chr9:133999022-133999561	chr9	+	133999151	133999257	True	NM_005085,NM_033387	chr9,chr9	+,-	NUP214,FAM78A	1723,152699
chr5:216034-216786	chr5	+	216045	216763	True	NM_004168,NM_145265	chr5,chr5	+,-	SDHA,CCDC127	1592,1584
chr5:216034-216786	chr5	-	1598444	1599111	False	NR_003263,NM_004553	chr5,chr5	-,+	SDHAP3,NDUFS6	-3798,202384
chr6:119253233-119254384	chr6	+	119253616	119254357	True	NM_017696,NM_153255,NM_014034	chr6,chr6,chr6	-,-,+	MCM9,MCM9,ASF1A	-713,2021,-38432
chr11:62389724-62390234	chr11	+	62389728	62390152	True	NM_153265,NM_012200,NM_000327	chr11,chr11,chr11	-,-,+	EML3,B3GAT3,ROM1	-9491,-280,-9566
chr13:28673769-28674197	chr13	+	28673773	28674205	True	NM_004119,NM_175854	chr13,chr13	-,+	FLT3,PAN3	574,38437
chr2:130809937-130810995	chr2	+	130810253	130810723	True	NR_026758,NM_032144	chr2,chr2	-,+	LOC440905,RAB6C	-1549,-73069
chr2:130809937-130810995	chr2	+	131201129	131201193	False	NM_032357,NM_001079530	chr2,chr2	-,+	CCDC115,CFC1B	-101207,77473
chr2:130809937-130810995	chr2	-	131435471	131435541	False	NR_023391,NM_001079530	chr2,chr2	+,-	C2orf14,CFC1B	2081,-78220
chr19:17664248-17664478	chr19	+	17664257	17664529	True	NM_138454,NM_024656	chr19,chr19	-,+	NXNL1,GLT25D1	-92532,1981
chr16:68002912-68003686	chr16	+	68002971	68003711	True	NM_001145961,NM_001145962,NM_001145963,NM_001145964,NM_005072,NM_017803	chr16,chr16,chr16,chr16,chr16,chr16	-,-,-,-,-,+	SLC12A4,SLC12A4,SLC12A4,SLC12A4,SLC12A4,DUS2L	-374,-374,-5003,-2190,-374,53492
chr16:88218311-88219688	chr16	+	88218341	88219463	True	NM_001173543,NM_001739	chr16,chr16	+,-	BANP,CA5A	-214768,-248229
chr16:88218311-88219688	chr16	+	29230140	29230190	False	NR_002939,NM_001031827	chr16,chr16	+,-	RUNDC2C,BOLA2	72350,236145
chr15:45251096-45251724	chr15	+	45251467	45251555	True	NM_014080,NM_152448	chr15,chr15	-,+	DUOX2,C15orf43	154856,-2618
chr18:47341298-47342930	chr18	+	47341663	47342492	True	NR_003003,NM_006111	chr18,chr18	+,-	SCARNA17,ACAA2	-1329,-1412
chr11:111411843-111412061	chr11	+	111411842	111412018	True	NM_178834,NM_017589	chr11,chr11	+,-	LAYN,BTG4	-660,-28778
chr5:68789762-68790105	chr5	+	68789839	68790010	True	NM_002538,NM_001205255,NM_001205254,NM_001015892	chr5,chr5,chr5,chr5	+,+,+,-	OCLN,OCLN,OCLN,TAF9	-1771,9993,-1300,-123999
chr15:31196349-31197036	chr15	+	31196409	31197082	True	NM_017762,NM_014967,NM_001146095,NM_001146094,NM_001146096	chr15,chr15,chr15,chr15,chr15	-,+,+,+,+	MTMR10,FAN1,FAN1,FAN1,FAN1	86783,-388,-409,-388,-388
chr19:55551810-55552210	chr19	+	55551811	55552192	True	NM_001083899,NM_133180,NM_016363	chr19,chr19,chr19	-,+,-	GP6,EPS8L1,GP6	-2179,35028,-2179
chr1:215303048-215304249	chr1	+	215303068	215304183	True	NM_014217,NM_005401	chr1,chr1	+,-	KCNK2,PTPN14	-46559,-578044
chr13:19525684-19525914	chr13	+	19525700	19525912	True	NR_027995,NR_026852	chr13,chr13	-,+	LOC284232,LOC348021	-79591,56486
chr16:638752-638963	chr16	+	638784	638888	True	NM_001172665,NM_001172664,NM_001172666,NM_001040160,NM_001172663,NM_021168	chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,-,+,+	RAB40C,RAB40C,RAB40C,C16orf13,RAB40C,RAB40C	1188,780,1188,47509,468,1284
chr7:82073444-82073716	chr7	+	82073578	82073716	True	NM_000722,NM_001127444	chr7,chr7	-,+	CACNA2D1,CD36	-547,-1797867
chr5:170288777-170289004	chr5	+	170288872	170289052	True	NM_004137,NM_022897	chr5,chr5	-,+	KCNMB1,RANBP17	-472234,-27
chr5:167720251-167722128	chr5	+	167720335	167722126	True	NM_001161661,NM_015238,NM_001161662,NR_029520	chr5,chr5,chr5,chr5	+,+,+,-	WWC1,WWC1,WWC1,MIR103-1	-1322,-1322,-1322,265906
chr17:58678405-58678690	chr17	+	58678463	58678709	True	NM_003620,NM_006380	chr17,chr17	+,-	PPM1D,APPBP2	-970,-74883
chr17:26971189-26971618	chr17	+	26971207	26971635	True	NM_014680,NM_003170	chr17,chr17	-,+	KIAA0100,SUPT6H	588,17666
chr2:232374008-232374265	chr2	+	232374016	232374175	True	NR_024079,NM_152614	chr2,chr2	-,+	C2orf52,C2orf57	4926,83399
chr5:80529282-80529827	chr5	+	80529304	80529802	True	NM_001099736,NM_001099735,NM_001825,NR_034121	chr5,chr5,chr5,chr5	+,+,+,-	CKMT2,CKMT2,CKMT2,LOC100131067	-216,-216,-216,67643
chr11:6497076-6499067	chr11	+	6497280	6498690	True	NM_012192,NM_006458,NM_033278,NM_012402	chr11,chr11,chr11,chr11	+,-,-,-	FXC1,TRIM3,TRIM3,ARFIP2	3986,-2075,-2075,3955
chr18:72201056-72201527	chr18	+	72201062	72201450	True	NR_024484,NM_032649	chr18,chr18	-,+	LOC400657,CNDP1	63671,241
chr17:78516064-78516483	chr17	+	78516064	78516426	True	NM_002522,NM_020761,NM_001163034	chr17,chr17,chr17	-,+,+	NPTX1,RPTOR,RPTOR	-65660,2198,2198
chr1:155145754-155146239	chr1	+	155145757	155146143	True	NM_025058,NM_173852	chr1,chr1	+,-	TRIM46,KRTCAP2	216,29
chr15:55701329-55702701	chr15	+	55701721	55702558	True	NM_001198784,NM_001204450,NM_001204451,NM_004748,NM_020739	chr15,chr15,chr15,chr15,chr15	+,-,-,-,-	FLJ27352,CCPG1,CCPG1,CCPG1,CCPG1	-1049,-1013,-1013,-1147,-1013
chr1:154477661-154479336	chr1	+	154477864	154479324	True	NM_182499,NM_001010846,NM_001098475	chr1,chr1,chr1	+,-,+	TDRD10,SHE,TDRD10	-3221,-3338,-3221
chr6:168482097-168482407	chr6	+	168482191	168482437	True	NM_030615,NM_001122841,NM_024919	chr6,chr6,chr6	+,-,-	KIF25,FRMD1,FRMD1	-63689,-5659,-2352
chr7:39605984-39606237	chr7	+	39606067	39606171	True	NM_138701,NM_020192	chr7,chr7	-,+	C7orf11,C7orf36	568130,-115
chr7:98806172-98806697	chr7	+	98806315	98806499	True	NM_001145715,NR_002147	chr7,chr7	-,+	KPNA7,MYH16	-1226,64424
chr9:89558555-89560353	chr9	+	89558632	89560196	True	NM_002048,NM_001001709	chr9,chr9	-,+	GAS1,C9orf170	1969,203362
chr6:28548671-28550414	chr6	+	28548689	28550394	True	NM_052923,NM_003996	chr6,chr6	-,+	SCAND3,GPX5	4772,-54956
chr6:28548671-28550414	chr6_cox_hap2	+	70893	72598	False	NM_052923,NM_003996	chr6_cox_hap2,chr6_cox_hap2	-,+	SCAND3,GPX5	4772,-54956
chr18:12310344-12311029	chr18	+	12310789	12311071	True	NM_006796,NM_032525	chr18,chr18	-,+	AFG3L2,TUBB6	66254,-2589
chr16:84854835-84855050	chr16	+	84854846	84855050	True	NM_001145548,NM_031476	chr16,chr16	-,+	ZDHHC7,CRISPLD2	190141,-1310
chr1:151130077-151130548	chr1	+	151130195	151130488	True	NM_024575,NM_001204848,NR_037937,NM_001204856,NM_001136543,NM_024041,NM_212551	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,-,+,-	TNFAIP8L2,TNFAIP8L2-SCNM1,SCNM1,SCNM1,LYSMD1,SCNM1,LYSMD1	-1141,-1141,8009,8009,7987,8009,7933
chr19:11270495-11271078	chr19	+	11270591	11271023	True	NM_001195803,NM_182513	chr19,chr19	+,-	LDLR,SPC24	-70604,-4107
chr16:84332470-84332676	chr16	+	84332474	84332675	True	NM_021197,NM_172347	chr16,chr16	+,-	WFDC1,KCNG4	-4124,-59118
chr12:57524279-57525284	chr12	+	57524518	57525331	True	NM_002332,NR_033659	chr12,chr12	+,-	LRP1,STAT6	-2287,-19322
chr12:122232321-122232699	chr12	+	122232371	122232744	True	NM_015048,NM_019034,NR_002809	chr12,chr12,chr12	+,-,-	SETD1B,RHOF,LOC338799	9893,-777,8696
chr4:15003146-15003457	chr4	+	15003153	15003409	True	NM_001177384,NM_001177381,NM_001177383,NM_001177382,NM_182646,NM_001193534,NM_182485	chr4,chr4,chr4,chr4,chr4,chr4,chr4	+,+,+,+,+,-,+	CPEB2,CPEB2,CPEB2,CPEB2,CPEB2,FBXL5,CPEB2	888,888,888,888,888,653676,888
chrX:134161587-134162611	chrX	+	134162256	134162579	True	NM_001078171,NM_001078173	chrX,chrX	+,-	FAM127A,FAM127C	3753,-5690
chr7:66308474-66309119	chr7	+	66308772	66308960	True	NR_003934,NM_017994	chr7,chr7	-,+	LOC729156,C7orf42	903,77242
chr7:66308474-66309119	chr7	-	65961071	65961122	False	NM_001167961,NR_002933	chr7,chr7	+,-	KCTD7,LOC493754	132745,82427
chr3:99536924-99537976	chr3	+	99537032	99538013	True	NM_014890,NM_032359	chr3,chr3	-,+	FILIP1L,C3orf26	57084,-412
chrY:7142996-7143213	chrY	+	7143127	7143235	True	NR_028062,NM_001143	chrY,chrY	+,-	PRKY,AMELY	-1165,-401059
chr15:40760889-40762831	chr15	+	40761393	40762671	True	NM_130468,NR_002208	chr15,chr15	+,-	CHST14,MRPL42P5	488,62128
chr17:46808361-46809933	chr17	+	46808986	46809960	True	NR_036150,NR_024103,NM_032391,NM_006361	chr17,chr17,chr17,chr17	-,+,-,-	MIR3185,NCRNA00253,PRAC,HOXB13	-7149,-8508,-9104,-2875
chr1:48403754-48404457	chr1	+	48403836	48404398	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	58214,283958
chr7:30180550-30180953	chr7	+	30180549	30180733	True	NM_017946,NM_152793	chr7,chr7	-,+	FKBP14,C7orf41	-114281,-6048
chr14:67982488-67983019	chr14	+	67982548	67983062	True	NM_020715,NM_182526	chr14,chr14	+,-	PLEKHH1,TMEM229B	16945,-527
chr17:30412328-30413135	chr19	-	14357843	14357893	True	NM_014921,NM_001025160	chr19,chr19	-,+	LPHN1,CD97	-40846,134319
chr17:30412328-30413135	chr17	+	30412436	30413010	False	NR_033412,NR_002222	chr17,chr17	+,-	SH3GL1P1,ARGFXP2	-45132,65630
chr3:132349887-132351018	chr3	+	132350192	132350916	True	NM_032169,NM_198329	chr3,chr3	-,+	ACAD11,UBA5	28115,22373
chr1:29510948-29512018	chr1	+	29511119	29511365	True	NM_005626,NM_001195001	chr1,chr1	-,+	SRSF4,PTPRU	-2482,51662
chr1:26483990-26484396	chr1	+	26484183	26484441	True	NM_024869,NM_032588	chr1,chr1	+,-	GRRP1,TRIM63	1069,-90062
chr2:99759695-99760642	chr2	+	99760233	99760464	True	NM_182911,NM_144706	chr2,chr2	-,+	TSGA10,C2orf15	-2196,-2099
chr2:73145938-73146174	chr2	+	73146003	73146205	True	NM_015189,NM_004097	chr2,chr2	-,+	EXOC6B,EMX1	-92826,-1450
chr1:85921763-85922381	chr1	+	85921898	85922344	True	NM_001554,NM_012137	chr1,chr1	+,-	CYR61,DDAH1	124099,8601
chr5:55295082-55295589	chr5	+	55295415	55295475	True	NM_002184,NM_001190981,NM_175767,NM_139017	chr5,chr5,chr5,chr5	-,-,-,+	IL6ST,IL6ST,IL6ST,IL31RA	-4594,-4594,-4594,-148132
chr1:26184581-26185225	chr1	+	26184748	26185254	True	NM_024037,NM_001099626	chr1,chr1	-,+	C1orf135,FAM54B	644,-37482
chr16:33729588-33730492	chr16	+	33729602	33730337	True	NR_033866,NM_001205265	chr16,chr16	-,+	LOC390705,TP53TG3B	-430900,-467533
chr16:33729588-33730492	chr16	-	31994411	31994461	False	NR_002827,NM_003414	chr16,chr16	-,+	HERC2P4,ZNF267	169463,-109383
chr16:33729588-33730492	chr16	-	32937278	32938013	False	NR_003083,NM_016212	chr16,chr16	-,+	SLC6A10P,TP53TG3	-40815,266966
chr7:87533910-87534311	chr7	+	87534131	87534227	True	NM_006716,NM_018843	chr7,chr7	+,-	DBF4,SLC25A40	-28641,-28439
chr9:46285033-46285487	chr9	+	46285473	46285535	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2654743,402030
chr9:46285033-46285487	chr9	-	45097677	45097739	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-107492,-1466947
chr9:46285033-46285487	chr9	+	67694402	67694456	False	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	99783,232304
chr10:15214432-15215391	chr10	+	15214477	15215242	True	NM_183005,NM_004808	chr10,chr10	+,-	RPP38,NMT2	-75346,-3782
chr9:130955483-130955847	chr9	+	130955589	130955665	True	NM_001005336,NM_004408,NM_001131018,NM_001131017,NM_001131016	chr9,chr9,chr9,chr9,chr9	+,+,-,-,-	DNM1,DNM1,CIZ1,CIZ1,CIZ1	9997,9997,-1721,-1721,-1721
chr20:61200146-61200553	chr20	+	61200210	61200526	True	NR_033263,NR_029676	chr20,chr20	-,+	C20orf200,MIR133A2	-51442,-38142
chr7:102947499-102948788	chr7	+	102947864	102948738	True	NR_027768,NM_004279	chr7,chr7	-,+	DPY19L2P2,PMPCB	-26951,-10042
chr8:144768539-144769334	chr8	+	144768552	144768656	True	NM_001162914,NM_001100598,NM_001100599,NM_173831	chr8,chr8,chr8,chr8	-,+,+,+	LOC100130274,ZNF707,ZNF707,ZNF707	21673,-1989,-1989,-1989
chr7:44143387-44143592	chr7	+	44143392	44143588	True	NM_001129,NM_001127218	chr7,chr7	+,-	AEBP1,POLD2	371,19609
chr20:21685500-21685828	chr20	+	21685651	21685725	True	NM_002509,NM_006192	chr20,chr20	-,+	NKX2-2,PAX1	-190987,571
chr8:30671551-30672667	chr8	+	30671811	30672541	True	NM_001009552,NM_005671	chr8,chr8	-,+	PPP2CB,UBXN8	-1459,-70172
chr5:78403500-78404953	chr5	+	78403657	78404777	True	NM_013391,NM_001713	chr5,chr5	-,+	DMGDH,BHMT	-38208,2826
chr1:212785297-212787020	chr1	+	212785421	212786977	True	NM_001674,NM_018664,NM_001040619	chr1,chr1,chr1	+,-,+	ATF3,BATF3,ATF3	-3480,86400,-3480
chr12:77378058-77378648	chr12	+	77378133	77378625	True	NM_203394,NM_015336	chr12,chr12	-,+	E2F7,ZDHHC17	80785,-220330
chr2:237478561-237479144	chr2	+	237478594	237479190	True	NM_020311,NM_024726	chr2,chr2	+,-	CXCR7,IQCA1	-265,-62502
chr1:25603412-25604324	chr1	+	25603638	25604066	True	NM_001127691,NM_020317,NM_016124	chr1,chr1,chr1	+,-,+	RHD,C1orf63,RHD	-4708,-29653,-4708
chr1:25603412-25604324	chr1	-	25742261	25742689	False	NM_020485,NM_138618,NM_138616,NM_138617,NM_018202	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	RHCE,RHCE,RHCE,RHCE,TMEM57	4724,4724,4724,4724,14698
chr2:97651869-97652070	chr2	+	97651881	97652061	True	NM_001122646,NM_001164315	chr2,chr2	-,+	FAM178B,ANKRD36	290,127171
chr1:90291914-90293282	chr1	+	90292150	90293322	True	NM_018103,NM_001134479,NR_002830	chr1,chr1,chr1	+,+,-	LRRC8D,LRRC8D,GEMIN8P4	-4729,-5636,167253
chr5:129283170-129284381	chr5	+	129283650	129284396	True	NR_024611,NM_175856	chr5,chr5	-,+	HINT1,CHSY3	1216686,-43193
chr20:30457785-30458015	chr20	+	30457789	30458033	True	NM_001012644,NM_177991,NM_001008409,NM_080611	chr20,chr20,chr20,chr20	-,-,+,-	DUSP15,DUSP15,TTLL9,DUSP15	0,28,471,496
chr1:156825290-156826786	chr1	+	156825291	156826755	True	NM_001012331,NM_002529,NM_014215	chr1,chr1,chr1	+,+,-	NTRK1,NTRK1,INSRR	3915,3915,2007
chr4:3372273-3372913	chr4	+	3372295	3372953	True	NM_002337,NM_198227	chr4,chr4	-,+	LRPAP1,RGS12	161321,-623
chr17:27620679-27621060	chr17	+	27620796	27621104	True	NM_005208,NM_020772	chr17,chr17	+,-	CRYBA1,NUFIP2	-46972,112
chr17:32908859-32909290	chr17	+	32908890	32909305	True	NM_207454,NM_207313	chr17,chr17	-,+	C17orf102,TMEM132E	-2502,-1173
chr7:27220972-27221453	chr7	+	27220982	27221406	True	NM_005523,NM_018951,NR_037940,NR_037939,NM_153715,NR_002795	chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,+	HOXA11,HOXA10,HOXA10-HOXA9,HOXA10,HOXA10,HOXA11-AS1	3480,-7027,-1102,-1102,-1106,3620
chrY:16167772-16168199	chrY	+	16167793	16168245	True	NM_181880,NM_004679	chrY,chrY	+,+	VCY1B,VCY	72,68
chrY:16167772-16168199	chrY	-	16098244	16098696	False	NM_181880,NM_004679	chrY,chrY	-,-	VCY1B,VCY	-72,-68
chrX:41585359-41586073	chrX	+	41585589	41586121	True	NM_080817,NM_001126054	chrX,chrX	+,-	GPR82,CASK	-2232,196220
chr2:121556671-121557775	chr2	+	121556705	121557635	True	NR_027181,NM_005270	chr2,chr2	-,+	LOC84931,GLI2	-332780,-1889
chr7:39772649-39772902	chr7	+	39772651	39772893	True	NM_138701,NR_026999	chr7,chr7	-,+	C7orf11,NCRNA00265	401408,273
chr7:65217051-65217258	chr7	+	65217126	65217218	True	NR_003110,NM_000181,NR_002961	chr7,chr7,chr7	+,-,+	CCT6P1,GUSB,SNORA22	-1086,230133,3294
chr2:20647490-20647844	chr2	+	20647531	20647815	True	NM_015317,NM_004040	chr2,chr2	-,+	PUM2,RHOB	-120387,-747
chr19:36860037-36860471	chr19	+	36860069	36860211	True	NM_020917,NR_033748	chr19,chr19	-,+	ZFP14,LOC644189	9944,52227
chr18:55400084-55400860	chr18	+	55400131	55400572	True	NM_005603,NM_004852	chr18,chr18	-,+	ATP8B1,ONECUT2	69816,-297267
chr3:170137076-170137303	chr3	+	170137116	170137336	True	NM_005602,NM_020949,NM_001185056	chr3,chr3,chr3	+,-,+	CLDN11,SLC7A14,CLDN11	-514,166577,1691
chr11:71783344-71784260	chr11	+	71783370	71783815	True	NM_006185,NR_036123,NM_145309,NM_001145310,NR_026886,NM_001205138,NM_001145307,NM_001145308,NM_001145309	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,+,+,+,+,+,+,+	NUMA1,MIR3165,LRTOMT,LRTOMT,LRTOMT,LRTOMT,LRTOMT,LRTOMT,LRTOMT	7809,-22,7561,7566,7877,7561,7561,7561,7566
chr4:1974865-1975616	chr4	+	1974935	1975559	True	NR_030641,NR_003004	chr4,chr4	-,+	MIR943,SCARNA22	12695,803
chr19:20012010-20012586	chr19	+	20012230	20012610	True	NM_001145404,NM_031218	chr19,chr19	-,+	ZNF506,ZNF93	-79670,-559
chr1:11986973-11987615	chr1	+	11987141	11987203	True	NM_000302,NM_138346	chr1,chr1	+,-	PLOD1,KIAA2013	7520,-656
chr18:21595439-21596010	chr18	+	21595459	21595985	True	NM_001135993,NR_024232,NM_018030	chr18,chr18,chr18	+,+,-	TTC39C,TTC39C,OSBPL1A	-1126,-1126,256261
chr9:139638508-139639076	chr9	+	139638528	139639122	True	NM_198946,NR_033913,NM_001001712	chr9,chr9,chr9	-,+,-	LCN6,LOC100128593,LCN10	3908,1490,-1117
chr3:112736280-112736995	chr3	+	112736372	112737015	True	NM_015412,NR_027794,NR_027796,NM_138485	chr3,chr3,chr3,chr3	-,-,-,+	C3orf17,C3orf17,C3orf17,GTPBP8	1592,1592,1592,-26623
chr10:95516656-95517380	chr10	+	95516678	95517323	True	NM_005097,NM_145246	chr10,chr10	+,-	LGI1,FRA10AC1	242,-54349
chr2:196881847-196883484	chr2	+	196882249	196883172	True	NM_020342,NM_018897	chr2,chr2	+,-	SLC39A10,DNAH7	-360459,50423
chr1:53479870-53480606	chr1	+	53479877	53480585	True	NM_018281,NM_001007100,NM_001007099,NM_001007250	chr1,chr1,chr1,chr1	-,+,+,+	ECHDC2,SCP2,SCP2,SCP2	-92431,24,24,24
chr4:24914148-24914380	chr4	+	24914211	24914275	True	NM_001130726,NM_003102	chr4,chr4	-,+	CCDC149,SOD3	375,-117177
chr1:11118845-11119077	chr1	+	11118845	11119087	True	NM_003132,NM_007375	chr1,chr1	-,+	SRM,TARDBP	1054,-46217
chr1:154834240-154835081	chr1	+	154834261	154834851	True	NM_001826,NM_001204087,NM_002249,NM_170782	chr1,chr1,chr1,chr1	+,-,-,-	CKS1B,KCNN3,KCNN3,KCNN3	112266,7953,7953,-1923
chr4:124315124-124315460	chr4	+	124315124	124315372	True	NM_198041,NM_199327,NM_005841	chr4,chr4,chr4	-,+,+	NUDT6,SPRY1,SPRY1	-471001,2583,5310
chr19:51875774-51875984	chr19	+	51875822	51876022	True	NM_001985,NM_152353,NR_033235,NM_005601	chr19,chr19,chr19,chr19	-,-,+,-	ETFB,CLDND2,LOC100129083,NKG7	-6150,-3565,43137,4
chr1:15255357-15256121	chr1	+	15255371	15256123	True	NM_001018000,NM_001018001,NR_027136	chr1,chr1,chr1	+,+,-	KAZN,KAZN,C1orf126	-4797,172,222887
chr17:76623184-76623450	chr17	+	76623193	76623450	True	NM_173628,NM_024419	chr17,chr17	-,+	DNAH17,PGS1	-49717,-248509
chr19:8430308-8431175	chr19	+	8430715	8431213	True	NM_139314,NM_001039667,NM_198471	chr19,chr19,chr19	+,+,-	ANGPTL4,ANGPTL4,KANK3	-1755,-1755,-22569
chr17:76129723-76130026	chr17	+	76129736	76130074	True	NM_007267,NM_001127198,NM_152468	chr17,chr17,chr17	-,-,+	TMC6,TMC6,TMC8	-1248,-4875,-2928
chr5:174871950-174872201	chr5	+	174871974	174872199	True	NM_022754,NM_000794	chr5,chr5	+,-	SFXN1,DRD1	33314,-811
chr9:131580241-131580742	chr9	+	131580439	131580611	True	NM_016390,NM_004435	chr9,chr9	-,+	C9orf114,ENDOG	11524,167
chr13:28025275-28026223	chr13	+	28025339	28026223	True	NM_002097,NM_152912,NM_001166261,NM_001166262,NM_001166263	chr13,chr13,chr13,chr13,chr13	+,-,-,-,-	GTF3A,MTIF3,MTIF3,MTIF3,MTIF3	-26709,-600,-1005,-1013,-600
chr4:107949067-107950800	chr4	+	107949198	107950656	True	NM_014421,NM_001142416	chr4,chr4	-,+	DKK2,AIMP1	6849,-711585
chr19:22953281-22953831	chr19	+	22953436	22953734	True	NM_020855,NM_001080409	chr19,chr19	+,-	ZNF492,ZNF99	-136362,-652
chr5:16505246-16505669	chr5	+	16505253	16505706	True	NM_019000,NM_006317	chr5,chr5	-,+	FAM134B,BASP1	3376,712043
chr9:100743516-100743760	chr9	+	100743515	100743809	True	NM_018437,NM_006401	chr9,chr9	-,+	HEMGN,ANP32B	-36381,1679
chr1:165177456-165178177	chr1	+	165177460	165177876	True	NM_001174069,NM_001005214	chr1,chr1	-,+	LMX1A,LRRC52	147652,335601
chr5:115387904-115388972	chr5	+	115387937	115388693	True	NR_033363,NM_001195581	chr5,chr5	-,+	ATG12,LOC644100	-210389,-825
chr5:61697500-61699423	chr5	+	61697913	61699311	True	NM_014473,NM_016338	chr5,chr5	-,+	DIMT1L,IPO11	467,9261
chrX:100662902-100663292	chrX	+	100662906	100663276	True	NM_001032393,NM_019597,NM_000169,NR_028407	chrX,chrX,chrX,chrX	+,+,-,+	HNRNPH2,HNRNPH2,GLA,ARMCX4	38,38,-31,9989
chr2:38594025-38594465	chr2	+	38594063	38594444	True	NM_001135673,NR_027252	chr2,chr2	-,+	ATL2,C2orf58	10047,-235875
chr2:234613704-234614617	chr2	+	234613817	234614434	True	NM_001001394,NM_019078	chr2,chr2	-,+	DNAJB3,UGT1A5	38278,7203
chr19:50556873-50558808	chr19	+	50557261	50558637	True	NM_016440,NR_027257	chr19,chr19	-,+	VRK3,FLJ26850	-28456,-3384
chr5:140209644-140209954	chr5	+	140209668	140209892	True	NM_031849,NM_002109,NM_018908,NM_018909,NM_031848,NM_031501,NM_018910,NM_031852	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,-,+,+,+,+,+,+	PCDHA6,HARS,PCDHA5,PCDHA6,PCDHA6,PCDHA5,PCDHA7,PCDHA7	-2069,-138697,-8358,-2069,-2069,-8358,4076,4076
chr11:67138021-67139421	chr11	+	67138034	67139374	True	NM_001166212,NM_004584,NM_013246	chr11,chr11,chr11	-,+,-	CLCF1,RAD9A,CLCF1	2324,20048,1882
chr19:36138326-36138571	chr19	+	36138502	36138572	True	NM_000704,NM_001863,NM_014209	chr19,chr19,chr19	-,+,+	ATP4A,COX6B1,ETV2	-83942,552,-5906
chr7:150779852-150780345	chr7	+	150779873	150779987	True	NM_031434,NM_031946,NM_001042535,NM_001136044,NM_033015,NM_006712	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,-,-,-	TMUB1,AGAP3,AGAP3,TMUB1,FASTK,FASTK	476,3838,3838,683,-1922,-1922
chr2:143903060-143903356	chr2	+	143903140	143903397	True	NM_018460,NM_018557	chr2,chr2	+,-	ARHGAP15,LRP1B	-16304,-1013870
chr19:53935869-53936426	chr19	+	53935868	53936455	True	NM_001008401,NR_003148,NM_033341	chr19,chr19,chr19	+,+,-	ZNF761,LOC147804,BIRC8	-692,-678,-140993
chr19:53935869-53936426	chr19	-	53192849	53192905	False	NR_003936,NR_023311	chr19,chr19	-,+	ZNF83,ZNF137P	1037,-92969
chr11:18479861-18481530	chr11	+	18479913	18481575	True	NM_144972,NM_001144071,NM_006292	chr11,chr11,chr11	+,+,-	LDHAL6A,LDHAL6A,TSG101	-2590,-2590,66972
chr1:27246700-27248158	chr1	+	27247042	27248136	True	NM_021969,NM_006600	chr1,chr1	-,+	NR0B2,NUDC	-6475,87
chr18:33555721-33556271	chr18	+	33555721	33556322	True	NR_029616,NM_031446,NM_001201476,NM_001201475,NM_001201474	chr18,chr18,chr18,chr18,chr18	-,+,+,+,+	MIR187,C18orf21,C18orf21,C18orf21,C18orf21	-70832,-3184,-3184,-3184,-3184
chr19:15833938-15834172	chr19	+	15833937	15834217	True	NM_013939,NR_033864	chr19,chr19	+,-	OR10H2,CYP4F24P	4616,56631
chr22:31649617-31650799	chr22	+	31649624	31650506	True	NM_001031801,NM_001135911,NM_016733	chr22,chr22,chr22	+,-,+	LIMK2,PIK3IP1,LIMK2	-5327,38064,-5327
chr11:575786-576194	chr11	+	575785	576210	True	NR_029623,NM_020901,NR_026967	chr11,chr11,chr11	-,+,-	MIR210,PHRF1,LOC143666	-7587,272,88
chr17:65047580-65048278	chr17	+	65047648	65048316	True	NM_014877,NM_000727	chr17,chr17	-,+	HELZ,CACNG1	193053,-7047
chr17:880901-881741	chr17	+	880974	881666	True	NM_022463,NM_013337	chr17,chr17	-,+	NXN,TIMM22	1394,18690
chr9:100001340-100002799	chr9	+	100001351	100002303	True	NR_036528,NR_036529,NM_199005,NR_036526,NR_036527	chr9,chr9,chr9,chr9,chr9	+,+,-,+,+	LOC57653,LOC57653,ZNF322B,LOC100499484,LOC57653	-694,-694,-39441,-694,-694
chr19:40814221-40814831	chr19	+	40814654	40814714	True	NM_001031696,NM_001626	chr19,chr19	+,-	PLD3,AKT2	39617,-23389
chr9:130025742-130026850	chr9	+	130025748	130026887	True	NM_032293,NM_012098	chr9,chr9	+,-	GARNL3,ANGPTL2	-132,-140704
chr17:40828066-40828271	chr17	+	40828066	40828276	True	NM_016602,NM_024927,NM_003632	chr17,chr17,chr17	-,-,+	CCR10,PLEKHH3,CNTNAP1	5619,822,6355
chr2:40712392-40714167	chr2	+	40712414	40713839	True	NM_001112802,NM_152390	chr2,chr2	-,+	SLC8A1,TMEM178	25791,-819438
chr5:10568037-10568736	chr5	+	10568054	10568666	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-3677,192771
chr4:142556199-142557242	chr4	+	142556278	142557234	True	NM_020724,NR_037840,NM_000585,NM_172175	chr4,chr4,chr4,chr4	-,+,+,+	RNF150,IL15,IL15,IL15	-501662,514,514,514
chr7:74509347-74509884	chr7	+	74509626	74509928	True	NM_030798,NM_001003795	chr7,chr7	-,+	WBSCR16,GTF2IRD2B	-19927,-1338
chr7:74509347-74509884	chr7	-	74266323	74266625	False	NM_173537,NR_027775	chr7,chr7	-,+	GTF2IRD2,PMS2P5	1274,40268
chr1:2005767-2006857	chr1	+	2005819	2006826	True	NM_001080484,NM_001033581	chr1,chr1	-,+	KIAA1751,PRKCZ	-70543,-784
chr8:110651358-110652102	chr8	+	110651394	110652088	True	NM_001099750,NM_004215,NM_001099751,NM_001099747,NM_001099753,NM_001099752,NM_001099755,NM_001099754,NM_001099756,NM_017786,NM_001099748,NM_001099749	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,+,-,-,-,-,-,-,-,-,-,-	SYBU,EBAG9,SYBU,SYBU,SYBU,SYBU,SYBU,SYBU,SYBU,SYBU,SYBU,SYBU	9094,-99150,5784,9094,5013,5784,5013,5013,3381,9094,9094,9094
chr12:107974341-107974722	chr12	+	107974343	107974673	True	NM_012406,NM_001017523	chr12,chr12	-,+	PRDM4,BTBD11	180293,1
chr11:57282107-57282312	chr11	+	57282129	57282203	True	NM_003627,NM_001198810,NM_001105565	chr11,chr11,chr11	-,-,+	SLC43A1,SLC43A1,SMTNL1	1039,205,27910
chr7:124406239-124406932	chr7	+	124406526	124406795	True	NM_005302,NM_001174046	chr7,chr7	-,+	GPR37,SPAM1	-845,-840668
chr11:95638026-95638585	chr11	+	95638072	95638477	True	NM_014679,NM_016156	chr11,chr11	+,-	CEP57,MTMR2	-114481,18951
chr8:86261255-86262759	chr8	+	86261703	86262799	True	NM_005181,NM_001164830	chr8,chr8	+,-	CA3,CA1	88256,-7760
chr5:36607174-36608767	chr5	+	36607300	36608722	True	NM_001166695,NM_001166696,NM_004172,NM_145000	chr5,chr5,chr5,chr5	+,+,+,-	SLC1A3,SLC1A3,SLC1A3,RANBP3L	232,-894,-894,-305289
chr1:48924664-48926409	chr1	+	48925330	48926384	True	NM_001135181,NM_019073	chr1,chr1	+,-	SLC5A9,SPATA6	-237035,11551
chr4:110223136-110223413	chr4	+	110223184	110223324	True	NM_032518,NM_198721,NM_001042734	chr4,chr4,chr4	-,-,+	COL25A1,COL25A1,SEC24B	525,525,131646
chrX:24648571-24649198	chrX	+	24648783	24649008	True	NM_001163265,NM_016937	chrX,chrX	-,+	PCYT1B,POLA1	16500,63055
chr9:115774317-115774564	chr9	+	115774399	115774609	True	NM_001101338,NR_024366	chr9,chr9	-,+	ZNF883,NCRNA00256A	31,100566
chr6:26159111-26159524	chr6	+	26159139	26159562	True	NM_138720,NM_003539,NM_005321,NM_021063	chr6,chr6,chr6,chr6	+,-,+,+	HIST1H2BD,HIST1H4D,HIST1H1E,HIST1H2BD	-841,29793,-2631,-841
chr1:27503901-27505066	chr1	+	27504138	27504836	True	NM_015023,NM_003047	chr1,chr1	+,-	WDTC1,SLC9A1	56170,-22687
chr16:16044706-16045638	chr16	+	16044706	16045433	True	NM_019900,NM_144600,NM_004996,NM_019862,NM_019898,NM_019899	chr16,chr16,chr16,chr16,chr16,chr16	+,-,+,+,+,+	ABCC1,FOPNL,ABCC1,ABCC1,ABCC1,ABCC1	-1323,-62259,-1323,-1323,-1323,-1323
chr22:25434908-25435199	chr22	+	25435099	25435225	True	NM_001001663,NM_001145206	chr22,chr22	-,+	TMEM211,KIAA1671	-99785,-11209
chr12:49932006-49932287	chr12	+	49932019	49932295	True	NM_012284,NM_001012300	chr12,chr12	+,-	KCNH3,MCRS1	644,27977
chr16:2854414-2855051	chr16	+	2854416	2855034	True	NM_152891,NM_001135086	chr16,chr16	-,+	PRSS33,PRSS41	-17708,-5981
chr15:96864259-96864880	chr15	+	96864282	96864732	True	NR_034095,NM_001145155,NM_021005	chr15,chr15,chr15	-,+,+	LOC400456,NR2F2,NR2F2	-993953,4424,9378
chr8:117950489-117950849	chr8	+	117950538	117950728	True	NM_006265,NM_001025357	chr8,chr8	-,+	RAD21,C8orf85	-63433,-125
chr12:133335848-133336440	chr12	+	133335966	133336436	True	NM_001170544,NM_015114	chr12,chr12	+,-	PGAM5,ANKLE2	-48625,2065
chr19:10959155-10960657	chr19	+	10959159	10960468	True	NM_001136482,NM_006858	chr19,chr19	+,-	C19orf38,TMED1	-104,-12176
chr1:220442918-220444623	chr1	+	220443264	220444661	True	NM_012414,NM_018060,NR_001587	chr1,chr1,chr1	-,+,-	RAB3GAP2,IARS2,AURKAPS1	1233,-175860,-2207
chr2:74535140-74536873	chr2	+	74535275	74535934	True	NR_024463,NM_021196	chr2,chr2	+,-	LOC100189589,SLC4A5	76910,6276
chr12:6053967-6054348	chr12	+	6053971	6054391	True	NM_020373,NM_001769	chr12,chr12	-,+	ANO2,CD9	1057,255090
chr6:158955766-158956180	chr6	+	158955798	158956143	True	NM_006519,NM_020823	chr6,chr6	-,+	DYNLT1,TMEM181	109726,1324
chr5:178488251-178489211	chr5	+	178488440	178489226	True	NM_014594,NM_000843	chr5,chr5	+,-	ZNF354C,GRM6	-884,-66316
chr11:89867667-89868037	chr11	+	89867672	89868031	True	NM_005467,NM_001144073	chr11,chr11	+,-	NAALAD2,CHORDC1	95,88552
chr14:23338826-23339104	chr14	+	23339028	23339090	True	NM_001077351,NM_014045	chr14,chr14	-,+	RBM23,LRP10	49356,1869
chr12:8236071-8237707	chr12	+	8236688	8237585	True	NM_004054,NM_015509,NR_024260	chr12,chr12,chr12	-,+,+	C3AR1,NECAP1,NECAP1	-17733,-1933,-1933
chr19:22360917-22362552	chr19	+	22361518	22362578	True	NM_001001411,NM_033468	chr19,chr19	-,+	ZNF676,ZNF257	17225,-126310
chr10:18042001-18042386	chr10	+	18042134	18042213	True	NM_014241,NM_001098844	chr10,chr10	-,+	PTPLA,FAM23A	-382761,-967
chr10:18042001-18042386	chr10	+	17795167	17795246	False	NM_014241,NM_001098844	chr10,chr10	-,+	PTPLA,FAM23A	-135794,-967
chr6:148889169-148890216	chr6	+	148889201	148890199	True	NM_207360,NM_005715	chr6,chr6	-,+	ZC3H12D,UST	915999,178071
chr10:1088461-1089558	chr10	+	1088529	1089605	True	NM_004508,NM_014023	chr10,chr10	-,+	IDI1,WDR37	5506,13170
chr19:6589559-6590457	chr19	+	6589672	6590411	True	NM_001252,NM_003811	chr19,chr19	-,+	CD70,TNFSF9	802,-58713
chr3:148934483-148935789	chr3	+	148934594	148935769	True	NM_000096,NM_032383	chr3,chr3	-,+	CP,HPS3	4122,-87286
chrX:39646812-39648577	chrX	+	39646926	39648329	True	NM_005765,NM_001123385	chrX,chrX	+,-	ATP6AP2,BCOR	791886,308441
chr1:207494351-207494865	chr1	+	207494358	207494764	True	NM_000574,NM_001114752,NM_018566	chr1,chr1,chr1	+,+,-	CD55,CD55,YOD1	52,52,-269936
chr11:68672134-68672357	chr11	+	68672136	68672254	True	NM_181515,NM_181514,NM_002180	chr11,chr11,chr11	-,-,+	MRPL21,MRPL21,IGHMBP2	-833,-833,-873
chr8:142351554-142351920	chr8	+	142351649	142351887	True	NR_024441,NM_005293	chr8,chr8	+,-	LOC731779,GPR20	-1052,25528
chr10:63660956-63661363	chr10	+	63661049	63661389	True	NM_032199,NM_145307	chr10,chr10	+,-	ARID5B,RTKN2	-87,367127
chr2:159311710-159313310	chr2	+	159311834	159313278	True	NM_001171637,NM_003628,NM_001005476,NM_138803	chr2,chr2,chr2,chr2	-,+,+,-	CCDC148,PKP4,PKP4,CCDC148	37,197,197,37
chr2:128144585-128144937	chr2	+	128144589	128144803	True	NM_000312,NM_006609	chr2,chr2	+,-	PROC,MAP3K2	31192,-43819
chr3:183146694-183147276	chr3	+	183146865	183147143	True	NM_015078,NM_032047	chr3,chr3	-,+	MCF2L2,B3GNT5	-1010,-175884
chr1:226737793-226739290	chr1	+	226738044	226739328	True	NM_001618,NM_001003665	chr1,chr1	-,+	PARP1,C1orf95	-142243,-1594
chr6:3895664-3896553	chr6	+	3895689	3896420	True	NM_183373,NM_012135	chr6,chr6	-,+	C6orf145,FAM50B	-143443,-46108
chr11:3862329-3862600	chr11	+	3862363	3862425	True	NM_001665,NM_003156	chr11,chr11	-,+	RHOG,STIM1	-150,14507
chr2:44224065-44225000	chr2	+	44224377	44224858	True	NM_022437,NM_133259	chr2,chr2	+,-	ABCG8,LRPPRC	-158327,-1233
chr1:27287175-27287562	chr1	+	27287240	27287608	True	NM_001013642,NM_152365	chr1,chr1	+,-	TRNP1,C1orf172	32586,-339
chr20:23344326-23345815	chr20	+	23344445	23345693	True	NM_022482,NM_022080	chr20,chr20	+,-	GZF1,NAPB	85,56513
chr15:49102783-49103156	chr15	+	49102790	49103194	True	NM_014335,NM_014985,NM_001194998	chr15,chr15,chr15	+,-,-	EID1,CEP152,CEP152	67095,199,199
chr14:21564134-21565762	chr14	+	21564211	21565775	True	NM_016423,NM_001101672,NM_001146683,NM_001102454	chr14,chr14,chr14,chr14	-,-,+,-	ZNF219,ZNF219,C14orf176,ZNF219	1083,1448,1320,7138
chr6:28366632-28367126	chr6	+	28366751	28367101	True	NM_024493,NM_001163391,NR_028077	chr6,chr6,chr6	+,-,-	ZKSCAN3,ZSCAN12,ZSCAN12	-49114,493,493
chr6:160544505-160545638	chr6	+	160544530	160545512	True	NM_003058,NM_153187,NM_003057	chr6,chr6,chr6	-,+,+	SLC22A2,SLC22A1,SLC22A1	134501,-1718,-1718
chr20:4130545-4131637	chr20	+	4130753	4131223	True	NM_175839,NM_000678,NM_175840,NM_175841,NM_175842	chr20,chr20,chr20,chr20,chr20	+,-,+,+,+	SMOX,ADRA1D,SMOX,SMOX,SMOX	-1354,98486,-1354,-1354,-1354
chr6:117586872-117587121	chr6	+	117586894	117586992	True	NM_002944,NM_182645,NM_153453	chr6,chr6,chr6	-,+,+	ROS1,VGLL2,VGLL2	160076,-208,-224
chr6:139354136-139354559	chr6	+	139354239	139354581	True	NM_031922,NM_021243	chr6,chr6	-,+	REPS1,C6orf115	-44841,-4471
chr16:23843818-23845368	chr16	+	23844284	23845340	True	NM_212535,NM_033266,NM_002738	chr16,chr16,chr16	+,-,+	PRKCB,ERN2,PRKCB	1959,-119463,1959
chr5:178017935-178018563	chr5	+	178018037	178018523	True	NM_173465,NM_058230	chr5,chr5	-,+	COL23A1,ZNF354B	-481,268430
chr19:54372003-54372322	chr19	+	54372028	54372280	True	NM_138373,NM_144687,NM_001020821,NM_001020820,NM_001020818,NM_001020819	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+	MYADM,NLRP12,MYADM,MYADM,MYADM,MYADM	-942,-44380,379,-2468,500,-942
chr9:130370956-130371523	chr9	+	130370983	130371365	True	NM_003165,NM_001032221,NM_001035534	chr9,chr9,chr9	+,+,-	STXBP1,STXBP1,FAM129B	3120,3120,-29715
chr5:608871-609254	chr5	+	608957	609035	True	NM_004174,NM_018140	chr5,chr5	-,+	SLC9A3,CEP72	-84408,3369
chr16:2302132-2302596	chr16	+	2302134	2302407	True	NM_001374,NM_001178029,NM_001919	chr16,chr16,chr16	+,-,-	DNASE1L2,ECI1,ECI1	-15719,-532,-532
chr15:74748390-74748697	chr15	+	74748673	74748747	True	NM_006465,NM_032907,NM_201265	chr15,chr15,chr15	+,-,-	ARID3B,UBL7,UBL7	84800,4815,4834
chr14:53619394-53619608	chr14	+	53619493	53619567	True	NM_030637,NM_001160148,NM_001160147,NM_145251	chr14,chr14,chr14,chr14	-,-,-,+	DDHD1,DDHD1,DDHD1,STYX	529,529,529,-422661
chr3:11039421-11040102	chr3	+	11039422	11040068	True	NM_003042,NR_027102	chr3,chr3	+,-	SLC6A1,LOC285370	-5053,-233545
chr11:111783872-111784216	chr11	+	111783992	111784190	True	NR_037651,NM_001885,NM_080659,NM_001541	chr11,chr11,chr11,chr11	+,-,+,+	HSPB2-C11ORF52,CRYAB,C11orf52,HSPB2	-583,-1519,5410,-583
chrX:50659486-50660642	chrX	+	50659553	50660511	True	NM_005448,NR_027121	chrX,chrX	+,-	BMP15,SHROOM4	-5876,-102509
chr8:18872296-18872864	chr8	+	18872299	18872777	True	NM_001174160,NM_015310	chr8,chr8	+,-	SH2D4A,PSD3	298303,-1103
chr19:12817340-12817807	chr19	+	12817395	12817761	True	NM_032301,NR_002751,NM_004317	chr19,chr19,chr19	-,-,+	FBXW9,SNORD41,ASNA1	-9940,-63,30544
chr3:32861590-32863184	chr3	+	32861610	32863038	True	NM_016141,NM_001039111	chr3,chr3	-,+	DYNC1LI1,TRIM71	-249244,-2151
chr1:156210632-156211325	chr1	+	156210880	156211098	True	NM_024897,NM_199173,NM_198406	chr1,chr1,chr1	-,+,-	PAQR6,BGLAP,PAQR6	6795,852,6744
chr17:40827851-40828066	chr17	+	40827972	40828092	True	NM_016602,NM_024927,NM_003632	chr17,chr17,chr17	-,-,+	CCR10,PLEKHH3,CNTNAP1	5803,1006,6539
chr12:6494926-6495170	chr12	+	6495082	6495184	True	NM_002342,NM_001159575	chr12,chr12	+,-	LTBR,SCNN1A	-1776,-8559
chr16:87416684-87416886	chr16	+	87416707	87416829	True	NM_022818,NM_024735,NR_024568	chr16,chr16,chr16	+,-,-	MAP1LC3B,FBXO31,FBXO31	8971,615,8929
chr2:200331009-200331361	chr2	+	200331058	200331312	True	NM_015265,NM_001172509,NM_001172517,NR_026830	chr2,chr2,chr2,chr2	-,-,-,+	SATB2,SATB2,SATB2,FLJ32063	4727,-8239,-1227,1508
chr3:9993762-9994100	chr3	+	9994022	9994130	True	NM_207351,NM_001077415	chr3,chr3	-,+	PRRT3,CRELD1	-2,-18548
chr2:229473946-229475600	chr2	+	229474122	229475543	True	NM_178821,NM_030623	chr2,chr2	+,-	WDR69,SPHKAP	-737858,-427761
chr3:32613050-32613814	chr3	+	32613053	32613703	True	NM_016141,NM_015442	chr3,chr3	-,+	DYNC1LI1,CNOT10	-687,112994
chr16:58056825-58057992	chr16	+	58056935	58057789	True	NM_020807,NM_002428	chr16,chr16	-,+	ZNF319,MMP15	-23173,1492
chr2:52798070-52798622	chr2	+	52798122	52798616	True	NM_001201965,NM_001008708	chr2,chr2	-,+	ASB3,CHAC2	1215419,1196312
chr1:206645365-206645992	chr1	+	206645661	206646019	True	NM_001193321,NM_001193322,NM_014002,NM_001201478	chr1,chr1,chr1,chr1	+,+,+,-	IKBKE,IKBKE,IKBKE,EIF2D	-2130,-2130,-2130,139935
chr16:4326105-4326358	chr16	+	4326121	4326255	True	NM_032575,NM_003223	chr16,chr16	+,-	GLIS2,TFAP4	55969,-3120
chr19:2386223-2387074	chr19	+	2386576	2386662	True	NM_182973,NM_012458	chr19,chr19	+,-	TMPRSS9,TIMM13	3121,41263
chr8:37412417-37413387	chr8	+	37412579	37413365	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	139935,192249
chr3:161089734-161089994	chr3	+	161089906	161090040	True	NM_001080440,NM_001040100	chr3,chr3	+,-	OTOL1,C3orf57	124555,-35
chr2:239135082-239135803	chr2	+	239135216	239135726	True	NR_026925,NR_026926,NR_026923	chr2,chr2,chr2	-,-,+	LOC151174,LOC151174,LOC643387	4642,4642,4600
chr12:104323829-104324280	chr12	+	104323828	104324207	True	NM_003299,NR_037425,NR_027249	chr12,chr12,chr12	+,+,-	HSP90B1,MIR3652,GNN	-19,-5,5
chr12:122515699-122516196	chr12	+	122515851	122516196	True	NM_014938,NM_001014336	chr12,chr12	+,-	MLXIP,IL31	563,142600
chr7:81380035-81380649	chr7	+	81380172	81380708	True	NM_000601,NM_001127444	chr7,chr7	-,+	HGF,CD36	18804,-1104468
chr12:131438678-131439119	chr12	+	131438766	131439160	True	NM_194356,NM_198827	chr12,chr12	-,+	STX2,GPR133	-114955,-365
chr5:10652385-10653135	chr5	+	10652445	10653113	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-88061,108324
chr1:16062747-16062949	chr1	+	16062761	16062995	True	NM_001089591,NM_001013641,NM_207348	chr1,chr1,chr1	-,+,+	UQCRHL,TMEM82,SLC25A34	71249,5921,-3
chr4:47969916-47971577	chr4	+	47970048	47971319	True	NM_001142564,NM_207330	chr4,chr4	-,+	CNGA1,NIPAL1	12281,47471
chr22:17964627-17966587	chr22	+	17965019	17966432	True	NM_001039366,NM_031413	chr22,chr22	-,+	ATP6V1E1,CECR2	145213,-8442
chr3:101228708-101229416	chr3	+	101228811	101229421	True	NM_001077203,NM_020654,NR_036433	chr3,chr3,chr3	-,-,+	SENP7,SENP7,FAM172B	2722,2722,8294
chr8:7739720-7739999	chr8	+	7739745	7739957	True	NM_152250,NM_018661,NM_001081551	chr8,chr8,chr8	-,+,+	DEFB105A,DEFB103B,DEFB103A	-58385,-883,-1071
chr8:7739720-7739999	chr8	-	7286638	7286850	False	NM_018661,NM_001040703,NM_001081551	chr8,chr8,chr8	-,+,-	DEFB103B,DEFB105B,DEFB103A	883,58392,1071
chr1:224371712-224372511	chr1	+	224371718	224372168	True	NM_003676,NR_031574	chr1,chr1	+,-	DEGS1,MIR320B2	-841,72725
chr7:97737936-97738332	chr7	+	97737935	97738173	True	NM_006188,NM_014916	chr7,chr7	-,+	OCM2,LMTK2	-118519,-1791
chr3:129721025-129721418	chr11	+	67722562	67722875	False	NM_030930,NM_001161473	chr11,chr11	-,+	UNC93B1,ALDH3B1	48907,53172
chr3:129721025-129721418	chr3	+	129721250	129721424	True	NM_001128224,NM_007117,NR_024252	chr3,chr3,chr3	-,+,-	TMCC1,TRH,LOC729375	-108831,-28187,108902
chrX:30326494-30326744	chrX	+	30326530	30326736	True	NM_177404,NM_000475	chrX,chrX	+,-	MAGEB1,NR0B1	-61310,809
chr21:30389485-30390555	chr21	+	30389526	30390560	True	NM_016940,NM_001001992,NM_001032410,NM_006447	chr21,chr21,chr21,chr21	-,+,+,+	RWDD2B,USP16,USP16,USP16	1175,6377,6377,6377
chr2:27805104-27805523	chr2	+	27805128	27805456	True	NM_032266,NM_001142683,NM_032434	chr2,chr2,chr2	+,-,+	C2orf16,CCDC121,ZNF512	-5790,46339,436
chr9:19227843-19229060	chr9	+	19228062	19228431	True	NR_038064,NM_017925	chr9,chr9	-,+	PLIN2,DENND4C	-100458,62317
chr1:150981019-150981354	chr1	+	150981106	150981364	True	NM_001040217,NM_021222,NM_001163258,NM_001163259,NM_018379,NM_001163260	chr1,chr1,chr1,chr1,chr1,chr1	-,+,-,-,-,-	FAM63A,PRUNE,FAM63A,FAM63A,FAM63A,FAM63A	-1721,-184,-252,-1833,-252,-1833
chr14:74257946-74258585	chr14	+	74257955	74258383	True	NM_001146154,NM_001043318	chr14,chr14	+,-	PTGR2,C14orf43	60150,-4059
chr2:119917429-119917635	chr2	+	119917522	119917670	True	NM_001008410,NM_182528	chr2,chr2	+,-	STEAP3,C1QL2	63713,-1051
chr8:97252208-97252884	chr8	+	97252514	97252916	True	NM_006294,NM_014754,NM_001199975	chr8,chr8,chr8	-,+,-	UQCRB,PTDSS1,UQCRB	-4652,21250,-4743
chr7:157132613-157133765	chr7	+	157132632	157133351	True	NR_029689,NM_058246,NM_005494	chr7,chr7,chr7	-,+,+	MIR153-2,DNAJB6,DNAJB6	233825,-2979,-2980
chr4:1877349-1878996	chr4	+	1878074	1879030	True	NM_012318,NM_001042424	chr4,chr4	-,+	LETM1,WHSC1	-20100,-5003
chr15:60688575-60689283	chr15	+	60688583	60689233	True	NM_012182,NM_001002858,NM_004039,NM_001002857,NM_001136015	chr15,chr15,chr15,chr15,chr15	+,-,-,-,-	FOXB1,ANXA2,ANXA2,ANXA2,ANXA2	-392213,1002,1002,1002,1002
chr12:94854013-94854281	chr12	+	94854090	94854296	True	NM_001042399,NM_016122,NR_027035	chr12,chr12,chr12	-,-,+	CCDC41,CCDC41,LOC144486	-326,-326,-362
chr7:65575796-65577783	chr7	+	65575795	65577352	True	NR_024548,NM_001040647,NM_014478,NM_001040648,NM_001142414,NM_000181	chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,+,-	CRCP,CRCP,CRCP,CRCP,CRCP,GUSB	2452,2452,2452,2452,2452,-128494
chr10:69643683-69644123	chr10	+	69643726	69644140	True	NM_201262,NM_001142498,NM_012238	chr10,chr10,chr10	-,+,+	DNAJC12,SIRT1,SIRT1	-45789,798,286
chr8:95909085-95910674	chr8	+	95909239	95910690	True	NM_057749,NM_017864	chr8,chr8	-,+	CCNE2,INTS8	-1757,-73756
chr7:63693541-63694487	chr7	+	63693897	63694511	True	NM_178558,NM_153363	chr7,chr7	-,+	ZNF680,ZNF679	329044,-5096
chr10:737131-737949	chr10	+	737243	737729	True	NR_027152,NM_014974	chr10,chr10	+,-	C10orf108,DIP2C	-41277,-1635
chr1:1860589-1861219	chr1	+	1860640	1861181	True	NM_138705,NM_178545	chr1,chr1	+,-	CALML6,TMEM52	-14425,-9900
chr19:36233512-36233993	chr19	+	36233709	36234003	True	NM_024660,NM_144987,NM_172341,NM_001040425,NM_019104	chr19,chr19,chr19,chr19,chr19	-,-,+,-,+	IGFLR1,U2AF1L4,PSENEN,U2AF1L4,LIN37	-358,2383,2490,2383,5508
chr17:66553660-66554315	chr17	+	66553912	66554290	True	NR_027751,NM_212472	chr17,chr17	-,+	FAM20A,PRKAR1A	328,-45425
chr15:23160102-23160849	chr15	+	23160363	23160488	True	NR_024074,NR_003521	chr15,chr15	+,-	GOLGA8IP,WHAMML1	94753,47934
chr3:113415726-113417435	chr3	+	113416052	113416967	True	NM_001690,NM_001009899	chr3,chr3	+,-	ATP6V1A,KIAA2018	48898,-559
chr16:90091980-90093411	chr16	+	90092569	90093292	True	NM_001042610,NM_001214,NR_023348	chr16,chr16,chr16	-,-,+	DBNDD1,C16orf3,GAS8	-6632,3067,-3613
chr4:140003938-140004613	chr4	+	140003965	140004650	True	NM_006874,NM_012118	chr4,chr4	-,+	ELF2,CCRN4L	1047,-67074
chr2:223918244-223918667	chr2	+	223918266	223918571	True	NM_080671,NM_005687	chr2,chr2	+,-	KCNE4,FARSB	-1455,-397439
chr15:56204019-56205414	chr15	+	56204132	56205460	True	NM_198400,NM_198524	chr15,chr15	-,+	NEDD4,TEX9	3926,452183
chr16:3336336-3337201	chr16	+	3336501	3337185	True	NM_005741,NM_033208	chr16,chr16	+,-	ZNF263,TIGD7	-3066,18316
chr6:28047918-28048246	chr6	+	28048095	28048164	True	NM_003447,NR_002936	chr6,chr6	+,-	ZNF165,LOC222699	317,138602
chrX:152600062-152600372	chrX	+	152600234	152600296	True	NM_001080485,NM_080701	chrX,chrX	+,-	ZNF275,TREX2	-672,111699
chr19:51768054-51769174	chr19	+	51768087	51769181	True	NM_173635,NM_001163922	chr19,chr19	+,-	C19orf75,VSIG10L	-7175,76247
chr13:19963743-19964848	chr13	+	19964050	19964870	True	NR_034026,NR_027248	chr13,chr13	+,-	LOC100287114,ANKRD26P3	-44924,-44937
chr10:112060597-112062244	chr10	+	112060664	112062280	True	NM_005962,NM_005871	chr10,chr10	+,-	MXI1,SMNDC1	-74964,2477
chr20:17683750-17684754	chr20	+	17683811	17684791	True	NM_001014977,NM_001159495,NM_004587,NM_178477	chr20,chr20,chr20,chr20	+,+,-,+	BANF2,BANF2,RRBP1,BANF2	-3272,-9545,-20883,-3272
chr5:122177070-122177515	chr5	+	122177112	122177526	True	NM_000943,NM_014035	chr5,chr5	-,+	PPIC,SNX24	194949,3633
chr4:47949097-47949609	chr4	+	47949097	47949345	True	NM_152995,NM_207330	chr4,chr4	-,+	NFXL1,NIPAL1	-32464,69445
chr16:11365475-11365952	chr16	+	11365580	11365938	True	NM_005425,NM_021247,NM_152308,NM_002761,NM_002762	chr16,chr16,chr16,chr16,chr16	-,-,+,-,-	TNP2,PRM3,C16orf75,PRM1,PRM2	-2420,1564,73372,9304,4449
chr1:161776399-161776915	chr1	+	161776496	161776964	True	NM_007348,NR_002595	chr1,chr1	+,-	ATF6,RPL31P11	-40463,-121454
chr20:51588747-51589206	chr20	+	51588879	51589161	True	NM_006526,NM_173485	chr20,chr20	-,+	ZNF217,TSHZ2	610525,0
chr11:124299700-124301574	chr11	+	124300108	124301550	True	NM_012378,NM_001005196,NM_001005194	chr11,chr11,chr11	-,-,+	OR8B8,OR8B4,OR8A1	9482,-5341,138414
chr20:61883359-61883703	chr20	+	61883370	61883738	True	NM_152864,NR_024389	chr20,chr20	-,+	NKAIN4,FLJ16779	2204,1591
chr9:33815926-33816804	chr9	+	33816119	33816713	True	NR_003685,NM_017811	chr9,chr9	-,+	SNORD121A,UBE2R2	136189,468
chr16:22568311-22569008	chr16	+	22568334	22568808	True	NR_003676,NR_027460	chr16,chr16	+,-	LOC653786,RRN3P3	-11366,-119298
chr16:22568311-22569008	chr16	+	21752212	21752686	False	NM_170664,NR_003370	chr16,chr16	+,-	OTOA,RRN3P1	-35979,77859
chr17:79883538-79883804	chr17	+	79883731	79883803	True	NM_002359,NM_016538,NM_032711,NR_015454	chr17,chr17,chr17,chr17	-,-,-,+	MAFG,SIRT7,MAFG,LOC92659	1835,-7673,-2323,1901
chr20:31756770-31758330	chr20	+	31757015	31758004	True	NM_080574,NM_080675	chr20,chr20	+,-	C20orf70,SUN5	-1106,-164776
chr12:58028866-58029073	chr12	+	58028865	58028950	True	NM_001478,NM_133489	chr12,chr12	-,+	B4GALNT1,SLC26A10	-1880,-15235
chr11:4393368-4394244	chr11	+	4393526	4394223	True	NM_001005161,NM_001005172	chr11,chr11	-,+	OR52B4,OR52K2	-3910,76301
chr17:37011582-37012212	chr17	+	37011604	37011664	True	NR_002576,NM_000978,NM_006148	chr17,chr17,chr17	-,-,+	SNORA21,RPL23,LASP1	-2356,-1551,14447
chr12:27931080-27931892	chr12	+	27931241	27931806	True	NM_001146221,NM_020782	chr12,chr12	-,+	LOC100287284,KLHDC5	-7032,1380
chr6:86157761-86159053	chr6	+	86157871	86158986	True	NM_001204813,NM_002526,NM_020468	chr6,chr6,chr6	+,+,-	NT5E,NT5E,SNX14	315,315,144702
chr1:115404185-115404715	chr1	+	115404187	115404763	True	NM_003176,NM_025073	chr1,chr1	+,-	SYCP1,SIKE1	-6790,-80879
chr12:101802316-101804251	chr12	+	101802603	101804051	True	NM_152323,NM_001177	chr12,chr12	+,-	SPIC,ARL1	67283,-1031
chr4:8871890-8872374	chr4	+	8871894	8872066	True	NM_018942,NM_001040071	chr4,chr4	-,+	HMX1,LOC650293	1527,79410
chrX:48690881-48692813	chrX	+	48691025	48692772	True	NM_013271,NM_181532	chrX,chrX	-,+	PCSK1N,ERAS	1239,-3793
chr21:46705814-46706772	chr21	+	46705869	46706530	True	NM_133635,NR_026943,NR_004858,NM_015227	chr21,chr21,chr21,chr21	-,+,-,-	POFUT2,LOC642852,POFUT2,POFUT2	1337,1436,1337,1337
chr17:39724526-39724807	chr17	+	39724530	39724774	True	NM_000226,NM_005801	chr17,chr17	-,+	KRT9,EIF1	3586,120352
chr17:34263779-34264329	chr17	+	34263784	34264360	True	NM_001163124,NM_001163125,NM_001034836,NM_001163120,NM_001163121,NM_001163122,NM_001163130,NM_002988,NM_020426,NM_145654,NM_003487,NR_027999,NR_027998,NR_027997,NR_027996,NR_028000,NM_001199951	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,-,-,+,-,-,+,-,-,-,-,-,-	RDM1,RDM1,RDM1,RDM1,RDM1,RDM1,RDM1,CCL18,LYZL6,RDM1,TAF15,RDM1,RDM1,RDM1,RDM1,RDM1,LYZL6	-6481,-6481,-6004,-6004,-6004,-6481,-6481,127282,2250,-6004,-127347,-6481,-6004,-6004,-6004,-6481,6393
chr11:65099285-65100077	chr11	+	65099457	65099849	True	NM_006268,NM_001077241	chr11,chr11	+,-	DPF2,SLC25A45	1496,50343
chr1:53308930-53309150	chr1	+	53308973	53309075	True	NM_001198961,NM_001004339	chr1,chr1	-,+	ECHDC2,ZYG11A	78421,-841
chr9:140080309-140080557	chr9	+	140080423	140080505	True	NM_003731,NM_013366	chr9,chr9	+,-	SSNA1,ANAPC2	2548,2602
chr2:7057922-7058127	chr2	+	7057929	7058127	True	NR_033997,NM_014746	chr2,chr2	-,+	LOC386597,RNF144A	736,-457
chr7:126866912-126867875	chr7	+	126866917	126867861	True	NM_000845,NM_001662	chr7,chr7	-,+	GRM8,ARF5	15758,360544
chr11:3862929-3863542	chr11	+	3862986	3863354	True	NM_001665,NM_003156	chr11,chr11	-,+	RHOG,STIM1	-773,13578
chr10:51984675-51985030	chr10	+	51984694	51984943	True	NM_018232,NM_001143974	chr10,chr10	+,-	FAM21B,ASAH2	-146859,23484
chr10:51984675-51985030	chr10	+	48039401	48039550	False	NM_002900,NR_033407	chr10,chr10	-,+	RBP3,CTSL1P2	351498,116392
chr4:187475828-187476297	chr4	+	187475855	187476265	True	NM_000128,NM_005958	chr4,chr4	+,-	F11,MTNR1A	-288788,324
chr4:185941215-185941617	chr4	+	185941248	185941572	True	NM_001029887,NR_037510	chr4,chr4	+,-	HELT,MIR3945	-1216,-168984
chr10:105218522-105218781	chr10	+	105218646	105218822	True	NR_024552,NM_001001412,NM_004210,NM_015916	chr10,chr10,chr10,chr10	-,-,+,-	CALHM2,CALHM1,NEURL,CALHM2	-6484,2,34912,-6484
chr2:65456812-65458042	chr2	+	65456959	65457919	True	NM_001005386,NM_005722,NM_015543	chr2,chr2,chr2	+,+,-	ACTR2,ACTR2,RAB1A	-2186,-2186,-99524
chr7:20377969-20378292	chr7	+	20378276	20378338	True	NM_182762,NM_002214	chr7,chr7	-,+	MACC1,ITGB8	-121263,-7607
chr5:143585105-143586846	chr5	+	143585174	143586553	True	NM_020768,NM_030799	chr5,chr5	+,-	KCTD16,YIPF5	-34788,-34896
chr16:89159826-89160187	chr16	+	89160021	89160131	True	NM_001127214,NR_023316,NM_174917,NM_005187	chr16,chr16,chr16,chr16	+,+,+,-	ACSF3,ACSF3,ACSF3,CBFA2T3	122,122,122,-116517
chr10:96975563-96976959	chr10	+	96975567	96976767	True	NM_207321,NM_020992	chr10,chr10	+,-	C10orf129,PDLIM1	-21661,74066
chr9:114941728-114943560	chr9	+	114941990	114943368	True	NM_022486,NM_001195822	chr9,chr9	-,+	SUSD1,HSDL2	-4434,198820
chr17:56406886-56408064	chr17	+	56407083	56407875	True	NM_024418,NM_004758,NR_027647,NR_029683	chr17,chr17,chr17,chr17	-,-,+,-	BZRAP1,BZRAP1,LPO,MIR142	-931,-931,-91347,854
chr19:17533613-17534220	chr19	+	17533781	17533871	True	NM_004335,NM_138401	chr19,chr19	-,+	BST2,FAM125A	-17397,-2925
chr9:33476024-33476422	chr9	+	33476024	33476248	True	NM_022917,NR_003573,NM_139235	chr9,chr9,chr9	-,+,-	NOL6,ANXA2P2,NOL6	-2083,147974,-2083
chr17:16876191-16877322	chr17	+	16876342	16877320	True	NM_015134,NM_012452	chr17,chr17	+,-	MPRIP,TNFRSF13B	68786,-940
chr7:142468740-142469097	chr7	+	142468743	142469087	True	NM_018646,NR_001296	chr7,chr7	-,+	TRPV6,TRY6	114440,9669
chr4:130004268-130005960	chr4	+	130004429	130005980	True	NM_144643,NM_173487	chr4,chr4	-,+	SCLT1,C4orf33	8838,8848
chr22:38989904-38990687	chr22	+	38990063	38990553	True	NM_001002880,NM_007068	chr22,chr22	+,-	CBY1,DMC1	62104,-23874
chr16:31108398-31109874	chr16	+	31109121	31109898	True	NM_001122957,NM_024006,NM_206824,NM_005881,NM_001039503	chr16,chr16,chr16,chr16,chr16	+,-,-,+,-	BCKDK,VKORC1,VKORC1,BCKDK,PRSS53	9763,-2845,-2845,9763,-8991
chrY:6323515-6324256	chrY	+	6323521	6324235	True	NR_001533,NR_001534,NR_003592	chrY,chrY,chrY	-,+,+	TTTY8,TTTY7,TTTY7B	17486,-6063,-6063
chrY:6323515-6324256	chrY	-	9546144	9546858	False	NR_003591,NR_001534,NR_003592	chrY,chrY,chrY	+,-,-	TTTY8B,TTTY7,TTTY7B	-17486,6063,6063
chr11:71792390-71794002	chr11	+	71792534	71793558	True	NM_006185,NR_036123,NM_145309,NM_001145310,NR_026886,NM_001205138,NM_001145307,NM_001145308,NM_001145309	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,+,+,+,+,+,+,+	NUMA1,MIR3165,LRTOMT,LRTOMT,LRTOMT,LRTOMT,LRTOMT,LRTOMT,LRTOMT	-961,-9186,-1208,-1203,-892,-1208,-1208,-1208,-1203
chr9:35728712-35729531	chr9	+	35728727	35729547	True	NM_006289,NM_006368	chr9,chr9	-,+	TLN1,CREB3	2895,2769
chr19:33571109-33571951	chr19	+	33571654	33571986	True	NM_033103,NM_018025	chr19,chr19	-,+	RHPN2,GPATCH1	-15830,-51
chr11:124622786-124623754	chr11	+	124622808	124623416	True	NM_138961,NM_006176,NM_014312	chr11,chr11,chr11	-,+,-	ESAM,NRGN,VSIG2	8857,-13030,-699
chr3:120051862-120053071	chr3	+	120052161	120053048	True	NM_001099678,NM_001168331	chr3,chr3	-,+	LRRC58,NDUFB4	15203,262079
chr11:118027495-118028121	chr11	+	118027521	118028145	True	NM_001142348,NM_019894,NM_174934	chr11,chr11,chr11	-,+,-	SCN4B,TMPRSS4,SCN4B	-3891,-79850,-3891
chr7:99969933-99970175	chr7	+	99969961	99970165	True	NM_178273,NR_003613,NM_178272,NM_013439	chr7,chr7,chr7,chr7	+,-,+,+	PILRA,PMS2P1,PILRA,PILRA	902,-36031,902,902
chr15:28777873-28778344	chr15	+	28778225	28778311	True	NR_036443,NR_033351,NR_033353	chr15,chr15,chr15	+,-,-	HERC2P9,GOLGA8F,GOLGA8G	121276,-82,-82
chr15:28777873-28778344	chr15	-	28623651	28623701	False	NM_004667,NR_033351,NR_033353	chr15,chr15,chr15	-,+,+	HERC2,GOLGA8F,GOLGA8G	-56356,82,82
chr15:28777873-28778344	chr15	+	22715810	22715860	False	NR_027407,NM_001001413	chr15,chr15	-,+	GOLGA8DP,GOLGA6L1	-82,20385
chr15:28777873-28778344	chr15	-	23434937	23434987	False	NR_002824,NR_033350	chr15,chr15	-,+	HERC2P2,GOLGA8E	-56678,82
chr15:28777873-28778344	chr15	-	23599736	23599786	False	NR_002824,NR_033350	chr15,chr15	-,+	HERC2P2,GOLGA8E	-221477,-164717
chr6:170599120-170599383	chr6	+	170599183	170599429	True	NM_032448,NM_005618	chr6,chr6	+,-	FAM120B,DLL1	16414,318
chr16:30442887-30444393	chr16	+	30443211	30443935	True	NM_024096,NM_016643	chr16,chr16	-,+	DCTPP1,ZNF771	-1838,-24529
chr6:33243389-33244786	chr6_qbl_hap6	+	4475627	4476939	False	NM_003782,NM_022551,NM_022553	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	+,+,-	B3GALT4,RPS18,VPS52	216,-3590,-3729
chr6:33243389-33244786	chr6_mcf_hap5	+	4717162	4718474	False	NM_003782,NM_022551,NM_022553	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	+,+,-	B3GALT4,RPS18,VPS52	216,-3591,-3730
chr6:33243389-33244786	chr6_cox_hap2	+	4687198	4688510	False	NM_003782,NM_022551,NM_022553	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,+,-	B3GALT4,RPS18,VPS52	216,-3587,-3726
chr6:33243389-33244786	chr6	+	33243388	33244700	True	NM_003782,NM_022551,NM_022553	chr6,chr6,chr6	+,+,-	B3GALT4,RPS18,VPS52	216,-3587,-3726
chr6:33243389-33244786	chr6_dbb_hap3	+	4524710	4526022	False	NM_003782,NM_022551,NM_022553	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	+,+,-	B3GALT4,RPS18,VPS52	216,-3587,-3726
chr17:5372443-5372663	chr17	+	5372447	5372509	True	NM_001199699,NM_020162,NM_024039	chr17,chr17,chr17	-,-,+	DHX33,DHX33,MIS12	-67,-67,17737
chr22:38349105-38349501	chr22	+	38349259	38349471	True	NM_032561,NM_021974	chr22,chr22	-,+	C22orf23,POLR2F	182,202
chr2:65218153-65218893	chr2	+	65218155	65218545	True	NR_036586,NM_003038,NM_001193493	chr2,chr2,chr2	-,+,+	LOC400958,SLC1A4,SLC1A4	-58574,-1711,-2627
chr13:76122140-76123017	chr13	+	76122182	76123056	True	NM_203497,NM_006002	chr13,chr13	-,+	COMMD6,UCHL3	-10191,870
chr6:150035229-150036496	chr6	+	150035553	150036540	True	NM_004690,NM_005389	chr6,chr6	-,+	LATS1,PCMT1	2902,34290
chr20:50179050-50179298	chr20	+	50179051	50179113	True	NM_014484,NM_001136021	chr20,chr20	+,-	MOCS3,NFATC2	-603739,105
chr1:52199167-52200917	chr1	+	52199562	52200939	True	NR_031580,NM_148905,NM_148904,NM_148907	chr1,chr1,chr1,chr1	-,+,+,+	MIR761,OSBPL9,OSBPL9,OSBPL9	101185,-4135,-4135,-4135
chr15:44942485-44943091	chr15	+	44942857	44942943	True	NM_004048,NM_001160227	chr15,chr15	+,-	B2M,SPG11	60741,12983
chr16:53469398-53470703	chr16	+	53469501	53470516	True	NM_001012398,NM_005611	chr16,chr16	-,+	AKTIP,RBL2	66704,-1201
chr16:85617453-85617757	chr16	+	85617496	85617640	True	NM_001134473,NM_016095	chr16,chr16	+,-	KIAA0182,GINS2	27388,104998
chr6:14790915-14791351	chr6	+	14790999	14791367	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	455159,871972
chrX:71929746-71930794	chrX	+	71929911	71930360	True	NM_002637,NM_001122670,NM_001080851,NM_001172436	chrX,chrX,chrX,chrX	-,-,+,-	PHKA1,PHKA1,DMRTC1B,PHKA1	3730,3730,134515,3730
chr1:153950099-153950501	chr1	+	153950193	153950539	True	NM_002870,NM_130898,NM_006694	chr1,chr1,chr1	-,+,-	RAB13,CREB3L4,JTB	8317,-9847,-22
chr5:128444498-128445777	chr5	+	128444554	128445663	True	NM_016048,NM_001999	chr5,chr5	+,-	ISOC1,FBN2	-14165,-570819
chr20:39667551-39668402	chr20	+	39667673	39668042	True	NM_015035,NM_003286	chr20,chr20	-,+	ZHX3,TOP1	260747,-10270
chr1:16564878-16566160	chr1	+	16564975	16565506	True	NM_001114600,NM_030907	chr1,chr1	+,-	C1orf144,RSG1	128076,-1316
chr19:55274114-55275390	chr19	+	55274572	55275133	True	NM_014218,NM_001127255	chr19,chr19	+,-	KIR2DL1,NLRP7	6131,183797
chr10:123746056-123747380	chr10	+	123746104	123747395	True	NM_017615,NM_206861,NM_206862	chr10,chr10,chr10	-,+,+	NSMCE4A,TACC2,TACC2	-11361,1293,1293
chr12:52445589-52445818	chr12	+	52445625	52445857	True	NM_002135,NM_173157,NM_001081492	chr12,chr12,chr12	+,+,-	NR4A1,NR4A1,KRT80	-490,-490,139977
chr17:38188190-38189411	chr17	+	38188289	38189199	True	NR_003692,NM_001079518	chr17,chr17	+,-	SNORD124,MED24	-4545,21740
chrX:154299480-154299747	chrX	+	154299728	154299796	True	NM_001018024,NM_024332,NM_001018055,NM_001018025	chrX,chrX,chrX,chrX	-,+,+,-	MTCP1NB,BRCC3,BRCC3,MTCP1	-181,-69,-69,-181
chr5:150834009-150834364	chr5	+	150834019	150834231	True	NM_078483,NM_181776	chr5,chr5	+,-	SLC36A1,SLC36A2	-6907,-106868
chr2:107146925-107148602	chr2	+	107147244	107148530	True	NM_001144013,NR_003506	chr2,chr2	-,+	RGPD3,PLGLA	-62443,-144526
chr7:151650912-151652330	chr7	+	151651513	151652351	True	NM_145292,NM_016203,NR_033169	chr7,chr7,chr7	+,-,+	GALNTL5,PRKAG2,GALNTL5	1112,-77197,1112
chr16:855359-855641	chr16	+	855363	855595	True	NM_001013638,NM_016541	chr16,chr16	+,-	PRR25,GNG13	-3,-4630
chr19:13045671-13047061	chr19	+	13046012	13046710	True	NM_004461,NM_005053,NM_004343	chr19,chr19,chr19	-,+,+	FARSA,RAD23A,CALR	-1454,9943,2703
chr12:4748764-4750656	chr12	+	4749366	4750464	True	NM_006422,NM_005002	chr12,chr12	-,+	AKAP3,NDUFA9	3936,7799
chr13:19772945-19773642	chr13	+	19773007	19773659	True	NM_006001,NR_034026	chr13,chr13	-,+	TUBA3C,LOC100287114	-17015,145529
chr19:49840733-49841312	chr19	+	49840874	49841238	True	NM_001040031,NM_014037,NM_001774	chr19,chr19,chr19	+,-,+	CD37,SLC6A16,CD37	-2248,-12400,-2248
chr22:23869412-23869906	chr22	+	23869501	23869755	True	NM_153615,NM_020070	chr22,chr22	+,-	RGL4,IGLL1	163292,52790
chr13:111524351-111524634	chr13	+	111524350	111524638	True	NM_005537,NR_027701	chr13,chr13	+,-	ING1,C13orf29	-157042,-1695
chr10:5062182-5062699	chr10	+	5062332	5062696	True	NM_001354,NM_205845,NM_001353	chr10,chr10,chr10	-,-,+	AKR1C2,AKR1C2,AKR1C1	-2125,-2125,-56938
chr11:117183422-117184309	chr11	+	117183569	117184111	True	NM_014956,NM_138973,NM_012104,NM_138971,NM_138972	chr11,chr11,chr11,chr11,chr11	+,-,-,-,-	CEP164,BACE1,BACE1,BACE1,BACE1	14459,2911,2911,2911,2911
chr10:52747917-52748209	chr10	+	52747917	52748233	True	NM_138933,NM_001098512	chr10,chr10	-,+	A1CF,PRKG1	-102482,2711
chr13:52417802-52418869	chr13	+	52417831	52418909	True	NR_027047,NR_027048,NM_031290	chr13,chr13,chr13	-,-,+	NCRNA00282,NCRNA00282,CCDC70	427,427,17207
chr17:40336478-40336899	chr17	+	40336513	40336915	True	NR_024573,NM_012285,NM_033194,NM_032484,NM_001524,NM_001142622,NM_001142623	chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,-,-,-,-	GHDC,KCNH4,HSPB9,GHDC,HCRT,GHDC,GHDC	9390,-3217,-61808,9685,605,9685,9685
chr13:52768947-52769375	chr13	+	52769162	52769326	True	NR_002816,NM_021645	chr13,chr13	-,+	THSD1P1,UTP14C	-560,-170386
chr12:49730364-49730755	chr12	+	49730547	49730651	True	NM_001008223,NM_024902	chr12,chr12	-,+	C1QL4,DNAJC22	370,10389
chr10:120928228-120928699	chr10	+	120928552	120928728	True	NM_005308,NM_006793,NM_213649,NM_014098	chr10,chr10,chr10,chr10	+,-,-,-	GRK5,PRDX3,SFXN4,PRDX3	38468,9667,-3348,9667
chr10:89118264-89118522	chr10	+	89118431	89118499	True	NM_001009610,NR_024397	chr10,chr10	+,-	FAM22D,LOC728190	-1005,-16116
chr10:89118264-89118522	chr10	+	88986212	88986280	False	NM_001099338,NR_024397	chr10,chr10	+,-	FAM22A,LOC728190	-1058,116085
chr10:89118264-89118522	chr10	+	81463990	81464058	False	NR_027512,NM_001098668	chr10,chr10	+,-	LOC650623,SFTPA2	-21310,-143827
chr10:89118264-89118522	chr10	+	81602121	81602189	False	NR_029407,NM_003019	chr10,chr10	+,-	LOC642361,SFTPD	-16514,106722
chr19:53774513-53775862	chr19	+	53774708	53775896	True	NM_001195187,NM_173857	chr19,chr19	+,-	LOC646508,VN1R4	8914,-3790
chr20:58533020-58533711	chr20	+	58533153	58533682	True	NM_177980,NM_006242	chr20,chr20	+,-	CDH26,PPP1R3D	12,-17801
chr1:46678339-46679737	chr1	+	46678840	46679647	True	NM_001013615,NR_024332	chr1,chr1	+,-	C1orf190,POMGNT1	-9900,6380
chr12:85311380-85312506	chr12	+	85311468	85312412	True	NM_001146335,NM_018057,NM_182767,NM_032165	chr12,chr12,chr12,chr12	-,-,-,+	SLC6A15,SLC6A15,SLC6A15,LRRIQ1	-4862,-4862,-4862,117686
chr16:88753577-88753793	chr16	+	88753582	88753736	True	NM_001012759,NM_178310	chr16,chr16	+,-	CTU2,SNAI3	19154,-700
chr14:105257126-105258079	chr14	+	105257227	105258083	True	NM_005163,NM_001014432,NM_001014431,NM_001137601	chr14,chr14,chr14,chr14	-,-,-,+	AKT1,AKT1,AKT1,ZBTB42	1905,4047,4047,8849
chr6:32797029-32797251	chr6_qbl_hap6	+	4029168	4029240	False	NM_018833,NM_000544,NR_037173	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	-,-,+	TAP2,TAP2,LOC100507463	9465,9465,14729
chr6:32797029-32797251	chr6_mcf_hap5	+	4133950	4134022	False	NM_018833,NM_000544,NR_037173	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	-,-,+	TAP2,TAP2,LOC100507463	9450,9450,14717
chr6:32797029-32797251	chr6_mann_hap4	+	4254257	4254329	False	NM_018833,NM_000544,NR_037173	chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4	-,-,+	TAP2,TAP2,LOC100507463	9465,9465,14729
chr6:32797029-32797251	chr6	+	32797062	32797134	True	NM_018833,NM_000544,NR_037173	chr6,chr6,chr6	-,-,+	TAP2,TAP2,LOC100507463	9463,9463,14728
chr6:32797029-32797251	chr6_cox_hap2	+	4241591	4241663	False	NM_018833,NM_000544,NR_037173	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	-,-,+	TAP2,TAP2,LOC100507463	9462,9462,14727
chr15:101398723-101399190	chr15	+	101398865	101399231	True	NM_001040616,NM_000693	chr15,chr15	-,+	LINS,ALDH1A3	-256420,20777
chrX:53850996-53852457	chrX	+	53851107	53852487	True	NM_031407,NM_001031745	chrX,chrX	-,+	HUWE1,RIBC1	-137434,-401268
chr15:76029843-76030532	chr15	+	76029847	76030427	True	NM_175881,NR_024595	chr15,chr15	+,-	ODF3L1,DNM1P35	-13579,2125
chr1:37941925-37942212	chr1	+	37941929	37942183	True	NM_022756,NM_025079	chr1,chr1	-,+	MEAF6,ZC3H12A	38231,-1861
chr19:14551339-14551997	chr19	+	14551344	14551986	True	NM_005804,NM_213560,NM_002741	chr19,chr19,chr19	-,+,+	DDX39A,PKN1,PKN1	-21149,-309,-7229
chr21:45084139-45084566	chr21	+	45084290	45084510	True	NM_015056,NM_007031	chr21,chr21	+,-	RRP1B,HSF2BP	-4917,-4916
chr3:46394239-46394596	chr3	+	46394273	46394576	True	NM_001123396,NM_001123041,NM_001199149	chr3,chr3,chr3	+,+,-	CCR2,CCR2,LTF	658,658,110646
chr7:108074633-108076432	chr7	+	108074637	108076278	True	NM_012328,NM_001193582	chr7,chr7	+,-	DNAJB9,NRCAM	133910,20626
chrX:49160254-49160567	chrX	+	49160287	49160595	True	NM_001098413,NM_014009	chrX,chrX	+,-	GAGE10,FOXP3	-213,-38999
chr11:67398368-67399027	chr11	+	67398538	67399058	True	NM_007103,NM_181843,NM_005995	chr11,chr11,chr11	+,-,-	NDUFV1,NUDT8,TBX10	-24266,-1137,8023
chr3:180041633-180042401	chr3	+	180041636	180042426	True	NM_001042601,NM_016559	chr3,chr3	+,-	TTC14,PEX5L	277491,-287119
chr10:97801261-97802134	chr10	+	97801593	97802165	True	NM_001134375,NM_019084,NR_036113,NM_001134376	chr10,chr10,chr10,chr10	+,+,-,+	CCNJ,CCNJ,MIR3157,CCNJ	993,993,22041,993
chr2:198296000-198296359	chr2	+	198296145	198296381	True	NM_025147,NM_001005526,NM_012433	chr2,chr2,chr2	+,-,-	COQ10B,SF3B1,SF3B1	21849,3448,3448
chr19:35416329-35417763	chr19	+	35416403	35417668	True	NM_001099438,NM_175872,NR_024018,NM_194325,NM_001099437	chr19,chr19,chr19,chr19,chr19	+,-,+,+,+	ZNF30,ZNF792,ZNF30,ZNF30,ZNF30	138,37335,138,138,138
chr21:37437249-37438638	chr21	+	37437467	37438391	True	NM_017438,NM_001007259,NM_001757	chr21,chr21,chr21	-,-,+	SETD4,SETD4,CBR1	-4651,-4856,3893
chr7:32976979-32977720	chr7	+	32977061	32977657	True	NM_007270,NR_003500	chr7,chr7	+,-	FKBP9,RP9P	19347,5175
chr5:38443290-38443732	chr5	+	38443380	38443762	True	NM_001127671,NM_182801	chr5,chr5	-,+	LIFR,EGFLAM	113036,1873
chr6:154639705-154640861	chr6	+	154639979	154640909	True	NM_001130699,NM_001145287	chr6,chr6	-,+	IPCEF1,OPRM1	10356,-232388
chr22:35922283-35923181	chr22	+	35922542	35923206	True	NM_005368,NM_014310	chr22,chr22	-,+	MB,RASD2	90228,14145
chr14:77227210-77227483	chr14	+	77227253	77227495	True	NM_015305,NM_014909	chr14,chr14	-,+	ANGEL1,VASH1	51838,739
chr20:54936955-54937491	chr20	+	54937245	54937535	True	NM_003600,NM_080821	chr20,chr20	-,+	AURKA,C20orf108	29871,-3313
chrX:18687533-18689133	chrX	+	18687652	18688941	True	NM_000330,NM_006240	chrX,chrX	-,+	RS1,PPEF1	1341,20103
chr1:1626302-1626791	chr1	+	1626478	1626684	True	NR_002946,NM_001110781	chr1,chr1	+,-	MMP23A,SLC35E2B	4693,-2235
chr1:1626302-1626791	chr1	+	1678707	1678913	False	NM_182838,NM_001199787,NR_002946	chr1,chr1,chr1	-,-,+	SLC35E2,SLC35E2,MMP23A	-1269,-1269,-47380
chr18:20513849-20514215	chr18	+	20513976	20514258	True	NM_002894,NM_203291,NM_032933,NM_203292	chr18,chr18,chr18,chr18	+,+,-,+	RBBP8,RBBP8,C18orf45,RBBP8	-732,-188,503717,-188
chr17:10633061-10633321	chr17	+	10633094	10633270	True	NM_001004313,NM_020233	chr17,chr17	-,+	TMEM220,C17orf48	426,-32218
chr11:72984299-72984744	chr11	+	72984306	72984702	True	NM_014824,NM_176797,NM_176796,NM_004154,NM_176798	chr11,chr11,chr11,chr11,chr11	-,+,+,+,+	FCHSD2,P2RY6,P2RY6,P2RY6,P2RY6	-131163,-8790,-8790,-1113,-3421
chr8:21899360-21899809	chr8	+	21899520	21899802	True	NM_024815,NM_003867	chr8,chr8	-,+	NUDT18,FGF17	67180,625
chr17:16548632-16548985	chr17	+	16548641	16548880	True	NM_020787,NM_014695	chr17,chr17	-,+	ZNF624,CCDC144A	8346,44758
chr19:35522380-35522845	chr19	+	35522382	35522734	True	NM_182983,NM_001037,NM_199037,NM_002151,NM_175872	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	HPN,SCN1B,SCN1B,HPN,ZNF792	8675,-841,-841,8675,-67429
chr9:90113341-90113610	chr9	+	90113481	90113651	True	NR_036691,NM_004938	chr9,chr9	-,+	LOC494127,DAPK1	-413341,-776
chr2:192746128-192746727	chr2	+	192746140	192746768	True	NM_004657,NM_001031716	chr2,chr2	-,+	SDPR,OBFC2A	-34134,-203337
chr3:152003502-152004728	chr3	+	152003755	152004737	True	NR_027038,NM_207293	chr3,chr3	-,+	LOC401093,MBNL1	-16340,12456
chr10:43048296-43049064	chr10	+	43048320	43048807	True	NR_026827,NR_026777	chr10,chr10	+,-	LOC84856,ZNF37BP	-77432,-40
chr20:8111586-8112374	chr20	+	8111586	8112406	True	NM_015192,NM_182734,NM_021156	chr20,chr20,chr20	+,+,-	PLCB1,PLCB1,TMX4	889,889,-111193
chr11:63578264-63578908	chr11	+	63578361	63578749	True	NM_138471,NM_001144936	chr11,chr11	+,-	C11orf84,C11orf95	2173,-42248
chr1:25748171-25749266	chr1	+	25748394	25749208	True	NM_020485,NM_138618,NM_138616,NM_138617,NM_018202	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	RHCE,RHCE,RHCE,RHCE,TMEM57	-1031,-1031,-1031,-1031,8179
chr1:25748171-25749266	chr1	-	25597119	25597872	False	NM_001127691,NM_020317,NM_016124	chr1,chr1,chr1	+,-,+	RHD,C1orf63,RHD	1108,-23134,1108
chr16:57835512-57835787	chr16	+	57835583	57835787	True	NM_001130099,NM_001130100,NM_005550,NM_005886	chr16,chr16,chr16,chr16	-,-,-,+	KIFC3,KIFC3,KIFC3,KATNB1	-3654,702,702,-65980
chr2:43307295-43308356	chr2	+	43307466	43308394	True	NR_027251,NM_006887	chr2,chr2	+,-	LOC100129726,ZFP36L2	145955,145401
chr9:139266595-139267070	chr9	+	139266606	139267032	True	NM_052813,NM_001200003,NM_001080849,NM_052814	chr9,chr9,chr9,chr9	-,+,-,-	CARD9,GPSM1,DNLZ,CARD9	1151,-17405,-8365,1151
chr17:6926332-6926860	chr17	+	6926460	6926842	True	NR_030178,NM_174893,NM_001142798,NM_001142799,NR_029712,NM_181844	chr17,chr17,chr17,chr17,chr17,chr17	-,+,+,+,-,+	MIR497,C17orf49,C17orf49,C17orf49,MIR195,BCL6B	-5119,-8455,-8455,-8455,-5440,-142
chr12:48395647-48396311	chr12	+	48395656	48396270	True	NM_024056,NM_033150,NM_001844	chr12,chr12,chr12	+,-,-	TMEM106C,COL2A1,COL2A1	-38379,2065,2065
chr17:73660106-73660847	chr17	+	73660199	73660649	True	NM_001003716,NM_004259,NM_001003715,NM_013260	chr17,chr17,chr17,chr17	-,-,-,+	RECQL5,RECQL5,RECQL5,SAP30BP	2670,2666,2670,2749
chr19:55457804-55459135	chr19	+	55458360	55459152	True	NM_206828,NM_139176,NM_001174081,NM_001127255	chr19,chr19,chr19,chr19	-,-,+,-	NLRP7,NLRP7,NLRP2,NLRP7	85,85,17499,85
chr12:52346545-52347102	chr12	+	52346672	52347136	True	NM_020328,NM_001013690,NM_004302,NM_020327	chr12,chr12,chr12,chr12	+,-,+,+	ACVR1B,FIGNL2,ACVR1B,ACVR1B	-1272,-120971,-1272,27
chrY:59328940-59329374	chrY	+	59328982	59329173	True	NR_002179,NM_002186	chrY,chrY	-,+	TTTY17C,IL9R	-31998062,1078
chrY:59328940-59329374	chrX	+	155225976	155226167	False	NM_002186,NM_018196	chrX,chrX	+,-	IL9R,TMLHE	1078,-383354
chrX:71360031-71360540	chrX	+	71360054	71360570	True	NM_207422,NM_001024455	chrX,chrX	+,-	FLJ44635,RGAG4	3463,-8303
chr1:151118895-151119115	chr1	+	151118962	151119038	True	NM_001178061,NM_030913,NM_001178062,NM_024575	chr1,chr1,chr1,chr1	-,-,-,+	SEMA6C,SEMA6C,SEMA6C,TNFAIP8L2	152,152,152,10066
chr4:16077851-16078579	chr4	+	16077912	16078230	True	NM_001145849,NM_001145848,NM_001145847,NM_001145850,NM_001145851,NM_001145852,NM_006017,NR_027696	chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4	-,-,-,-,-,-,-,+	PROM1,PROM1,PROM1,PROM1,PROM1,PROM1,PROM1,FLJ39653	-171,7443,7414,-171,-171,-171,-171,150055
chr6:52628842-52629439	chr6	+	52628870	52629407	True	NM_014051,NM_000846	chr6,chr6	+,-	TMEM14A,GSTA2	-93050,-509
chr6:52628842-52629439	chr6	+	52669619	52669669	False	NM_145740,NM_014051	chr6,chr6	-,+	GSTA1,TMEM14A	-955,-133786
chrX:55027260-55028405	chrX	+	55027613	55028293	True	NM_002625,NM_014481	chrX,chrX	-,+	PFKFB1,APEX2	-7102,-884
chr3:9973312-9974069	chr3	+	9973500	9973908	True	NM_001031717,NM_207351,NM_015513,NM_001077415	chr3,chr3,chr3,chr3	+,-,+,+	CRELD1,PRRT3,CRELD1,CRELD1	1616,20220,1615,1616
chr12:66523458-66524155	chr12	+	66523589	66524195	True	NM_032338,NM_001142523	chr12,chr12	-,+	LLPH,IRAK3	388,58782
chr3:23855124-23855594	chr3	+	23855345	23855567	True	NM_001202476,NM_003341,NM_020345,NM_182666	chr3,chr3,chr3,chr3	+,+,-,+	UBE2E1,UBE2E1,NKIRAS1,UBE2E1	-3474,-8024,103030,-8024
chr20:31329485-31330619	chr20	+	31329669	31330608	True	NM_006892,NM_001099339,NM_053041	chr20,chr20,chr20	+,-,-	DNMT3B,COMMD7,COMMD7	19582,1256,1256
chr5:145585436-145586302	chr5	+	145585689	145586080	True	NM_020117,NM_018989	chr5,chr5	-,+	LARS,RBM27	-23395,-2579
chrX:119754343-119754586	chrX	+	119754501	119754641	True	NM_152692,NM_001137554,NM_001011551	chrX,chrX,chrX	-,+,-	C1GALT1C1,MCTS1,C1GALT1C1	9422,-16003,9422
chr11:61100378-61100584	chr11	+	61100404	61100514	True	NM_001923,NM_015533	chr11,chr11	-,+	DDB1,DAK	202,139
chr12:66216721-66217353	chr12	+	66216853	66217351	True	NM_003483,NR_026825,NM_003484	chr12,chr12,chr12	+,-,+	HMGA2,RPSAP52,HMGA2	888,3453,888
chr8:11989257-11990982	chr8	+	11989256	11990932	True	NM_201402,NR_003275,NR_027425	chr8,chr8,chr8	-,-,+	USP17L2,LOC392196,FAM66D	5387,-2452,-16016
chr5:52778800-52779413	chr5	+	52778819	52779369	True	NM_013409,NM_006350,NM_176806	chr5,chr5,chr5	+,+,-	FST,FST,MOCS2	-2275,-2275,-373221
chr17:3628239-3628494	chr17	+	3628280	3628535	True	NM_175080,NM_031965	chr17,chr17	-,+	P2RX5,GSG2	-28582,-1134
chr16:1757015-1757535	chr16	+	1757071	1757534	True	NM_002513,NM_015133,NM_001040439	chr16,chr16,chr16	-,+,+	NME3,MAPK8IP3,MAPK8IP3	64227,-901,-901
chr17:76833473-76834916	chr17	+	76833476	76834965	True	NM_030968,NM_025090	chr17,chr17	+,-	C1QTNF1,USP36	185285,2054
chr9:99660987-99662172	chr9	+	99661180	99662049	True	NR_028350,NM_001001662	chr9,chr9	+,-	LOC441454,ZNF782	9307,-44791
chr9:99660987-99662172	chr9	-	97120257	97120995	False	NM_017561,NM_032558	chr9,chr9	-,+	FAM22F,HIATL1	-29331,15837
chr17:7123499-7123836	chr17	+	7123544	7123804	True	NM_001365,NR_029896,NM_001033859,NM_000018,NM_001128827	chr17,chr17,chr17,chr17,chr17	-,-,+,+,-	DLG4,MIR324,ACADVL,ACADVL,DLG4	-175,2944,-442,-442,-2616
chr16:75284395-75284679	chr16	+	75284411	75284689	True	NM_001170719,NM_001906,NM_001170717,NM_014567	chr16,chr16,chr16,chr16	-,+,-,-	BCAR1,CTRB1,BCAR1,BCAR1	-2187,-31578,887,887
chr7:6744225-6745272	chr7	+	6744407	6745078	True	NR_002217,NM_006956,NM_016265	chr7,chr7,chr7	+,-,-	PMS2CL,ZNF12,ZNF12	29857,1538,1538
chr4:114682291-114682554	chr4	+	114682314	114682380	True	NM_001221,NM_172115,NM_172129,NM_172127,NM_172114,NM_172128,NR_031641	chr4,chr4,chr4,chr4,chr4,chr4,chr4	-,-,-,-,-,-,+	CAMK2D,CAMK2D,CAMK2D,CAMK2D,CAMK2D,CAMK2D,MIR1243	753,753,753,753,753,753,-654346
chr16:1145190-1145417	chr16	+	1145203	1145417	True	NM_207419,NM_001053	chr16,chr16	-,+	C1QTNF8,SSTR5	877,-16473
chr9:90339315-90340583	chr9	+	90339625	90340411	True	NM_001039803,NM_145918,NM_001912	chr9,chr9,chr9	-,+,+	CDK20,CTSL1,CTSL1	249334,562,562
chr21:30466105-30467234	chr21	+	30466140	30467113	True	NM_020152,NM_006585	chr21,chr21	+,-	C21orf7,CCT8	-13326,-20130
chr15:93329704-93330975	chr15	+	93329821	93330939	True	NR_033769,NM_207446	chr15,chr15	+,-	ASB9P1,FAM174B	7774,-130790
chr6:159467001-159468792	chr6	+	159467027	159468752	True	NM_054114,NM_152133,NM_138810,NM_032532	chr6,chr6,chr6,chr6	-,-,-,+	TAGAP,TAGAP,TAGAP,FNDC1	-843,-843,-843,121676
chr1:54873234-54874222	chr1	+	54873342	54874202	True	NM_018070,NM_145716,NM_147161,NM_001009955	chr1,chr1,chr1,chr1	-,-,+,-	SSBP3,SSBP3,ACOT11,SSBP3	-1363,-1363,139604,-1250
chr17:3195483-3195970	chr17	+	3195525	3196011	True	NM_002550,NR_024128	chr17,chr17	-,+	OR3A1,OR3A4	13,17527
chr12:513162-513721	chr12	+	513504	513664	True	NM_001130146,NM_001042603,NM_032358	chr12,chr12,chr12	+,-,+	CCDC77,KDM5A,CCDC77	-2822,-14884,-2822
chr18:43683489-43684269	chr18	+	43683913	43684157	True	NR_026978,NM_138443,NM_004046,NM_001001937	chr18,chr18,chr18,chr18	+,+,-,-	HAUS1,HAUS1,ATP5A1,ATP5A1	140,140,-5626,92
chr7:73245482-73245706	chr7	+	73245492	73245698	True	NM_001305,NM_152559	chr7,chr7	+,-	CLDN4,WBSCR27	-350,11207
chrX:37901544-37903250	chrX	+	37901567	37903306	True	NM_001163334,NM_001170750	chrX,chrX	+,-	SYTL5,SRPX	-8831,176933
chr10:86321857-86323339	chr10	+	86322427	86323365	True	NM_018999,NM_015613	chr10,chr10	+,-	FAM190B,LRIT1	-234068,-321210
chr6:168197349-168197623	chr6	+	168197376	168197677	True	NR_026773,NM_001040000	chr6,chr6	-,+	C6orf123,MLLT4	63,29993
chr22:48973640-48974107	chr22	+	48973695	48974097	True	NR_033377,NM_015381	chr22,chr22	-,+	FLJ46257,FAM19A5	-946377,-1628
chr21:30395568-30396331	chr21	+	30395646	30396262	True	NM_016940,NM_001001992,NM_001032410,NM_006447	chr21,chr21,chr21,chr21	-,+,+,+	RWDD2B,USP16,USP16,USP16	-3961,675,675,675
chr1:43009216-43010471	chr1	+	43009234	43010527	True	NM_032257,NM_001080850	chr1,chr1	-,+	ZMYND12,CCDC30	-87296,-8732
chr19:22191027-22192707	chr19	+	22191493	22192714	True	NM_007153,NM_033468	chr19,chr19	-,+	ZNF208,ZNF257	1082,42551
chr8:47519118-47519439	chr8	+	47519117	47519401	True	NR_027013,NM_005195	chr8,chr8	+,-	NCRNA00293,CEBPD	233106,1131387
chr8:133577606-133577850	chr8	+	133577633	133577899	True	NR_026684,NM_198513	chr8,chr8	-,+	HPYR1,PHF20L1	-3907,209704
chr2:42078052-42078352	chr2	+	42078107	42078401	True	NR_033996,NM_004718	chr2,chr2	+,-	LOC388942,COX7A2L	26293,510005
chr20:35169468-35169718	chr20	+	35169523	35169741	True	NM_181526,NM_032214,NM_006097	chr20,chr20,chr20	+,-,+	MYL9,SLA2,MYL9	155,104867,155
chr18:55708604-55710047	chr18	+	55708717	55710094	True	NM_001144967,NM_015277,NM_001144964,NM_005603	chr18,chr18,chr18,chr18	+,+,+,-	NEDD4L,NEDD4L,NEDD4L,ATP8B1	1524,1524,4363,-238390
chr2:216946655-216946921	chr2	+	216946691	216946901	True	NM_018441,NM_001142312,NM_138390,NM_001142310,NM_001142311	chr2,chr2,chr2,chr2,chr2	-,+,+,+,+	PECR,TMEM169,TMEM169,TMEM169,TMEM169	-152,-153,-153,-153,-153
chr7:96756312-96756621	chr7	+	96756499	96756661	True	NM_005221,NM_020186	chr7,chr7	-,+	DLX5,ACN9	-102356,-10645
chr11:118872192-118873341	chr11	+	118872373	118873025	True	NM_198489,NR_003040	chr11,chr11	+,-	CCDC84,RPL23AP64	-3583,1334
chr16:82659492-82660674	chr16	+	82659585	82660707	True	NM_005792,NM_001257	chr16,chr16	-,+	MPHOSPH6,CDH13	-455756,62
chr12:6810040-6810320	chr12	+	6810053	6810269	True	NM_001164094,NM_153685	chr12,chr12	+,-	COPS7A,C12orf53	22880,-241
chr1:201857294-201857748	chr1	+	201857297	201857739	True	NM_198149,NM_012134,NR_030775	chr1,chr1,chr1	+,-,+	SHISA4,LMOD1,SHISA4	65,58027,57
chr22:40741927-40742220	chr22	+	40741944	40742126	True	NM_001123378,NM_000026,NM_020831	chr22,chr22,chr22	+,+,-	ADSL,ADSL,MKL1	377,377,290614
chr5:173139467-173139981	chr5	+	173139589	173139891	True	NR_027109,NM_138369	chr5,chr5	+,-	LOC285593,BOD1	-132983,-95923
chr1:151165613-151166289	chr1	+	151165851	151166050	True	NM_001135637,NM_001135636,NM_003557,NM_005997,NM_001135638	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	PIP5K1A,PIP5K1A,PIP5K1A,VPS72,PIP5K1A	4970,4970,4970,-3211,4970
chr11:3543942-3544399	chr11	+	3544244	3544318	True	NM_053017,NR_002720	chr11,chr11	-,+	ART5,TRPC2	119219,103395
chr3:126197131-126197409	chr3	+	126197174	126197454	True	NM_001040653,NM_025112,NM_152889	chr3,chr3,chr3	-,-,+	ZXDC,ZXDC,CHST13	-2412,-2412,45721
chr2:25897136-25897740	chr2	+	25897226	25897612	True	NM_183360,NM_183361,NM_033147,NM_016131,NM_021907,NM_033148	chr2,chr2,chr2,chr2,chr2,chr2	-,-,-,+,-,-	DTNB,DTNB,DTNB,RAB10,DTNB,DTNB	-723,-723,-723,359116,-723,-723
chr6:132890780-132891544	chr6	+	132890784	132891492	True	NM_175067,NM_003967	chr6,chr6	+,-	TAAR6,TAAR5	-32,19436
chr15:62933736-62934634	chr15	+	62933874	62934632	True	NM_015059,NR_026897	chr15,chr15	+,-	TLN2,MGC15885	4877,2798
chr13:95251831-95252798	chr13	+	95252111	95252614	True	NM_014305,NM_180989	chr13,chr13	-,+	TGDS,GPR180	-3600,1489
chrX:52653951-52654222	chrX	+	52653960	52654062	True	NR_027250,NM_173358	chrX,chrX	+,-	SSX8,SSX7	-2026,29938
chrX:52653951-52654222	chrX	+	48116589	48116639	False	NM_175723,NM_005635	chrX,chrX	-,+	SSX5,SSX1	-60390,-1843
chr5:771410-772348	chr5	+	771675	772199	True	NM_001166260,NM_007030	chr5,chr5	+,-	TRIP13,TPPP	120769,-78165
chr20:24931905-24932656	chr20	+	24932068	24932652	True	NM_003650,NM_020531	chr20,chr20	+,-	CST7,C20orf3	-2253,40823
chr4:65277557-65279334	chr4	+	65277556	65279064	True	NR_034138,NM_001010874	chr4,chr4	+,-	LOC100144602,TECRL	1256614,-2378
chrX:24077135-24077727	chrX	+	24077167	24077524	True	NM_030624,NM_001415	chrX,chrX	-,+	KLHL15,EIF2S3	-31864,-4155
chr19:47778802-47779048	chr19	+	47778891	47778967	True	NR_037675,NM_178511,NM_001127242	chr19,chr19,chr19	+,+,-	PRR24,PRR24,BBC3	-1283,-1339,-42868
chr10:5240758-5241488	chr10	+	5241031	5241529	True	NR_027916,NM_001818	chr10,chr10	-,+	AKR1CL1,AKR1C4	-13881,-2292
chr1:202926217-202927043	chr1	+	202926222	202926787	True	NM_016243,NM_015999,NM_001127687,NM_138391	chr1,chr1,chr1,chr1	-,-,-,+	CYB5R1,ADIPOR1,ADIPOR1,TMEM183A	9667,748,963,49746
chr9:14989554-14990264	chr9	+	14989870	14990300	True	NR_003920,NM_144966	chr9,chr9	+,-	LOC389705,FREM1	3024,-78877
chr13:115048087-115048788	chr13	+	115048102	115048832	True	NM_080687,NM_007368,NM_023011	chr13,chr13,chr13	+,-,+	UPF3A,RASA3,UPF3A	-1095,-150007,-1095
chr19:11458047-11459055	chr19	+	11458307	11458812	True	NM_001170635,NM_001080503,NM_022737,NM_198536,NM_001145416,NM_033408,NM_004283	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,-,-,-,-	LPPR2,CCDC159,LPPR2,TMEM205,TMEM205,TMEM205,RAB3D	7249,-1177,7249,-1326,-1326,-1326,-7963
chr1:12186837-12187799	chr1	+	12186879	12187818	True	NM_152942,NM_138346	chr1,chr1	+,-	TNFRSF8,KIAA2013	-972,-200394
chr6:20213587-20214539	chr6	+	20213648	20214084	True	NM_001949,NM_001080480	chr6,chr6	+,-	E2F3,MBOAT1	188052,-978
chr11:31831949-31832175	chr11	+	31831984	31832222	True	NM_001127612,NM_000280,NM_001604,NR_033971	chr11,chr11,chr11,chr11	-,-,-,+	PAX6,PAX6,PAX6,DKFZp686K1684	7337,707,707,5891
chr15:25459273-25459480	chr15	+	25459395	25459461	True	NR_003315,NR_003314,NR_003313,NR_003495,NR_003496,NR_003497,NR_003310,NR_022010,NR_003358,NR_003344,NR_003309,NR_003351,NM_130838,NR_003342,NR_003343,NR_003303,NR_003307,NR_003311,NR_003312	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,+,+,+,-,+,+,+,+,+,+	SNORD115-23,SNORD115-22,SNORD115-21,SNORD115-24,HBII-52-27,HBII-52-28,SNORD115-18,PAR4,SNORD115-43,SNORD115-29,SNORD115-17,SNORD115-36,UBE3A,SNORD115-25,SNORD115-26,SNORD115-11,SNORD115-15,SNORD115-19,SNORD115-20	-2503,-4381,-8037,-640,6188,8039,-9942,-2607,8931,8931,-9942,8931,191242,1226,4302,8931,-8037,-9942,-8037
chr1:161409592-161409881	chr1	+	161409594	161409880	True	NM_001136219,NM_001013625	chr1,chr1	+,-	FCGR2A,C1orf192	65324,-71930
chr22:18891560-18892154	chr22	+	18891634	18891948	True	NM_001195226,NM_005675	chr22,chr22	-,+	PRODH,DGCR6	32066,1787
chr3:14996587-14998340	chr3	+	14996629	14997919	True	NM_022497,NM_003298	chr3,chr3	-,+	MRPS25,NR2C2	108957,-7448
chr19:29404058-29404710	chr19	+	29404221	29404685	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	51352,299501
chr14:51965481-51966854	chr14	+	51965607	51966896	True	NM_001042481,NR_037676	chr14,chr14	+,-	FRMD6,C14orf82	-9804,151619
chr19:18044597-18045049	chr19	+	18044603	18044829	True	NM_001136203,NM_138442,NM_000215	chr19,chr19,chr19	+,+,-	CCDC124,CCDC124,JAK3	-830,1075,-85762
chr19:48305391-48306375	chr19	+	48305390	48306234	True	NM_198479,NM_000554	chr19,chr19	-,+	TPRX1,CRX	677,18864
chr19:48305391-48306375	chr19	-	48364061	48364111	False	NM_003167,NM_000554	chr19,chr19	-,+	SULT2A1,CRX	25593,-39013
chr9:111624858-111625085	chr9	+	111624880	111625078	True	NM_006687,NM_006686	chr9,chr9	+,-	ACTL7A,ACTL7B	-328,-6605
chr5:37840686-37840925	chr5	+	37840731	37840924	True	NM_152403,NM_000514,NM_001190469,NM_001190468,NM_199231	chr5,chr5,chr5,chr5,chr5	+,-,-,-,-	EGFLAM,GDNF,GDNF,GDNF,GDNF	417608,-949,-4802,-4802,-5138
chr3:52280216-52280700	chr3	+	52280449	52280737	True	NM_001122870,NM_007284,NM_144641	chr3,chr3,chr3	+,-,+	PPM1M,TWF2,PPM1M	-314,-7266,-691
chr17:45056052-45056308	chr17	+	45056056	45056178	True	NM_203400,NM_054022	chr17,chr17	-,+	RPRML,GOSR2	486,-55621
chr1:55090791-55091107	chr1	+	55090849	55091143	True	NM_176782,NR_026782	chr1,chr1	-,+	FAM151A,HEATR8	-1649,16283
chr5:60240109-60240546	chr5	+	60240120	60240528	True	NM_000082,NM_174889	chr5,chr5	-,+	ERCC8,NDUFAF2	427,427
chr19:38143990-38145618	chr19	+	38144130	38145655	True	NM_001172226,NM_014898	chr19,chr19	+,-	ZNF540,ZFP30	-58463,708
chr2:191393788-191395562	chr2	+	191394392	191395583	True	NM_001142645,NM_005966	chr2,chr2	-,+	TMEM194B,NAB1	3936,118264
chr20:2274596-2276113	chr20	+	2274682	2276064	True	NR_003684,NM_003245	chr20,chr20	-,+	SNORD119,TGM3	167679,548
chrX:51806838-51807282	chrX	+	51806871	51807203	True	NM_001098800,NM_177537,NM_177535,NM_030801,NR_003712,NR_003711	chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,+,-	MAGED4,MAGED4B,MAGED4B,MAGED4B,SNORA11E,SNORA11D	5126,5215,5215,5215,-479,-302
chrX:51806838-51807282	chrX	-	51933083	51933415	False	NM_001098800,NM_177537,NM_177535,NM_030801,NR_003712,NR_003711	chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,-,+	MAGED4,MAGED4B,MAGED4B,MAGED4B,SNORA11E,SNORA11D	-5126,-5215,-5215,-5215,479,302
chr19:7911163-7911562	chr19	+	7911162	7911574	True	NM_001159944,NM_001190467	chr19,chr19	+,-	EVI5L,FLJ22184	9,27802
chr22:26137434-26137791	chr22	+	26137621	26137753	True	NM_001135772,NM_032608	chr22,chr22	-,+	LRP5L,MYO18B	-360077,366
chr20:35233594-35234018	chr20	+	35233593	35234049	True	NM_199483,NM_001199534,NM_032214,NM_018840,NR_026562	chr20,chr20,chr20,chr20,chr20	+,+,-,+,+	C20orf24,C20orf24,SLA2,C20orf24,C20orf24	87,87,40559,87,87
chr17:39732267-39732777	chr17	+	39732434	39732772	True	NM_000226,NM_005801	chr17,chr17	-,+	KRT9,EIF1	-4124,112354
chr9:132385332-132386231	chr9	+	132385651	132385987	True	NM_199350,NM_014064	chr9,chr9	-,+	C9orf50,METTL11A	-2596,2447
chr15:43028241-43028508	chr15	+	43028240	43028448	True	NM_020759,NM_138477	chr15,chr15	+,-	STARD9,CDAN1	-160434,1019
chr16:69346035-69346674	chr16	+	69346140	69346418	True	NM_022341,NM_013245	chr16,chr16	-,+	PDF,VPS4A	18130,-912
chr16:32942573-32943360	chr17	+	36640376	36640426	True	NM_025248,NM_001199417	chr17,chr17	-,+	SRCIN1,ARHGAP23	121807,-55707
chr16:32942573-32943360	chr16	+	32942668	32943360	False	NR_003083,NM_016212	chr16,chr16	-,+	SLC6A10P,TP53TG3	-46205,261619
chr16:32942573-32943360	chr16	-	33724785	33724865	False	NR_033866,NM_001205265	chr16,chr16	-,+	LOC390705,TP53TG3B	-426083,-462716
chr4:186992117-186993409	chr4	+	186992414	186993240	True	NM_021069,NM_003265	chr4,chr4	-,+	SORBS2,TLR3	-114544,-2160
chr17:46123111-46123921	chr17	+	46123142	46123968	True	NM_003204,NR_029687,NM_016429	chr17,chr17,chr17	+,-,-	NFE2L1,MIR152,COPZ2	1717,-8529,-7990
chr12:70636816-70637149	chr12	+	70636984	70637144	True	NR_037615,NM_014515,NM_002837,NM_001199303,NM_001199302	chr12,chr12,chr12,chr12,chr12	+,+,-,+,+	CNOT2,CNOT2,PTPRB,CNOT2,CNOT2	349,-261,366530,349,-225
chr1:46012140-46013903	chr1	+	46012145	46013245	True	NM_001202414,NM_153326,NM_006066,NM_001202431,NM_001202413	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	AKR1A1,AKR1A1,AKR1A1,PRDX1,AKR1A1	3209,3209,3209,-23583,3209
chr1:154651779-154652916	chr1	+	154652038	154652921	True	NM_000748,NM_001025107	chr1,chr1	+,-	CHRNB2,ADAR	-111832,-51582
chr5:76116864-76117495	chr5	+	76116926	76117362	True	NM_005242,NM_004101	chr5,chr5	+,-	F2RL1,F2RL2	-2144,-197686
chr2:105853778-105854824	chr2	+	105853908	105854640	True	NM_001142621,NM_007227	chr2,chr2	-,+	TGFBRAP1,GPR45	91559,3559
chr22:38427634-38428521	chr22	+	38427667	38428432	True	NM_001039583,NM_006941	chr22,chr22	+,-	PICK1,SOX10	24829,-47128
chr4:159684867-159686834	chr4	+	159685354	159686703	True	NM_005038,NM_020840	chr4,chr4	-,+	PPID,FNIP2	-40802,3478
chr3:107843785-107845743	chr3	+	107844102	107845222	True	NM_007072,NM_198793	chr3,chr3	+,-	HHLA2,CD47	176109,-34167
chr17:79994492-79994882	chr17	+	79994588	79994756	True	NM_016286,NM_005052,NM_001195218	chr17,chr17,chr17	-,+,-	DCXR,RAC3,DCXR	867,-5107,867
chr20:5891656-5892098	chr20	+	5891697	5892028	True	NM_001819,NM_015939	chr20,chr20	+,-	CHGB,TRMT6	-55,39195
chr6:28053467-28055182	chr6	+	28053679	28054997	True	NM_003447,NR_002936,NR_024063	chr6,chr6,chr6	+,-,+	ZNF165,LOC222699,ZSCAN12P1	-5248,131766,3931
chr14:24047527-24048123	chr14	+	24047625	24047915	True	NM_001146028,NR_023314,NM_032452	chr14,chr14,chr14	-,+,-	JPH4,THTPA,JPH4	144,-22478,144
chr11:451316-451520	chr11	+	451404	451492	True	NM_030783,NM_001012302	chr11,chr11	+,-	PTDSS2,ANO9	-1175,-9393
chr8:9990306-9991635	chr8	+	9990337	9991309	True	NM_001199729,NR_029668	chr8,chr8	+,-	MSRA,MIR124-1	-37322,-229355
chr8:38645735-38646101	chr8	+	38645737	38646141	True	NM_006283,NR_003129,NM_001122824	chr8,chr8,chr8	+,-,+	TACC1,RNF5P1,TACC1	-1066,-186962,-1066
chr3:193936233-193936702	chr3	+	193936272	193936668	True	NR_024480,NM_005524	chr3,chr3	-,+	LOC100131551,HES1	93975,-82399
chr10:102286757-102287667	chr10	+	102286789	102287526	True	NM_017902,NM_015490,NM_005004	chr10,chr10,chr10	+,-,-	HIF1AN,SEC31B,NDUFB8	8114,-7194,2160
chr15:85926010-85927803	chr15	+	85926059	85927487	True	NM_007200,NR_031682,NM_006738	chr15,chr15,chr15	+,-,+	AKAP13,MIR1276,AKAP13	-2240,386377,-2240
chr3:139199843-139200468	chr3	+	139199858	139200446	True	NM_004164,NM_020191	chr3,chr3	-,+	RBP2,MRPS22	-4506,-137048
chr12:133266027-133267796	chr12	+	133266138	133267546	True	NM_018663,NM_006231	chr12,chr12	+,-	PXMP2,POLE	-1997,-2193
chr21:46055595-46056126	chr21	+	46055818	46056094	True	NM_198698,NM_198690,NM_181688	chr21,chr21,chr21	-,+,+	KRTAP12-4,KRTAP10-9,KRTAP10-10	18532,-8832,1178
chr10:73631955-73633057	chr10	+	73632098	73632702	True	NM_001171936,NM_002778	chr10,chr10	+,-	CDH23,PSAP	-60509,-21016
chr11:62184207-62185611	chr11	+	62184260	62185510	True	NM_003357,NM_206998	chr11,chr11	+,-	SCGB1A1,SCGB1D4	996,-117724
chr3:3219843-3220747	chr3	+	3219918	3220706	True	NM_001173482,NM_016302,NM_182916	chr3,chr3,chr3	-,-,+	CRBN,CRBN,TRNT1	755,755,-51369
chr6:82460071-82461259	chr6	+	82460110	82461225	True	NM_006670,NM_017633	chr6,chr6	+,-	TPBG,FAM46A	611697,1253
chr15:64443194-64443485	chr15	+	64443194	64443338	True	NM_024798,NM_000942	chr15,chr15	+,-	SNX22,PPIB	577,12066
chr18:24216833-24217247	chr18	+	24217048	24217245	True	NM_198991,NR_026908	chr18,chr18	-,+	KCTD1,C18orf16	3113,228026
chr4:62404974-62406157	chr4	+	62405072	62405918	True	NM_015236,NM_001010874	chr4,chr4	+,-	LPHN3,TECRL	-42284,2869319
chr5:122110220-122110629	chr5	+	122110313	122110573	True	NM_000943,NM_003100	chr5,chr5	-,+	PPIC,SNX2	261902,176
chr6:90056263-90057790	chr6	+	90056271	90057721	True	NM_014942,NM_016021	chr6,chr6	+,-	ANKRD6,UBE2J1	85175,4948
chr17:6462499-6463137	chr17	+	6462548	6463130	True	NM_001165966,NM_031220,NM_032731	chr17,chr17,chr17	-,-,+	PITPNM3,PITPNM3,TXNDC17	-2671,-2671,81091
chr17:80332263-80332775	chr17	+	80332428	80332658	True	NM_003004,NM_018949	chr17,chr17	-,+	SECTM1,UTS2R	-40507,-278
chr8:63998723-63999200	chr8	+	63998838	63999158	True	NM_152758,NM_000370	chr8,chr8	+,-	YTHDF3,TTPA	81962,-226
chr16:15745589-15745855	chr16	+	15745591	15745679	True	NM_001143979,NM_001184998,NM_014647,NR_030159,NM_001184999,NM_017668	chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,+,-,+	NDE1,KIAA0430,KIAA0430,MIR484,KIAA0430,NDE1	-8523,-8568,-8568,-8496,-8568,-1564
chr9:34120055-34120591	chr9	+	34120335	34120397	True	NM_015397,NM_001171201	chr9,chr9	-,+	DCAF12,UBAP1	6424,58605
chr2:131849142-131849639	chr2	+	131849258	131849428	True	NM_001100623,NM_001009993	chr2,chr2	+,-	PLEKHB2,FAM168B	12991,1626
chr15:60767125-60767402	chr15	+	60767287	60767462	True	NM_012182,NM_001018089,NM_024611	chr15,chr15,chr15	+,-,-	FOXB1,NARG2,NARG2	-470917,3943,3943
chr19:10149260-10149603	chr19	+	10149294	10149642	True	NM_015719,NR_027300	chr19,chr19	-,+	COL5A3,C3P1	-28147,2389
chr2:27072832-27074187	chr2	+	27072977	27074162	True	NM_020134,NM_001029881	chr2,chr2	+,-	DPYSL5,CIB4	-2059,-208766
chr12:11243498-11244872	chr12	+	11243748	11244601	True	NR_036583,NM_176884	chr12,chr12	+,-	LOC100129361,TAS2R43	79178,374
chr9:35861737-35862769	chr9	+	35861787	35862793	True	NM_001004487,NR_024006	chr9,chr9	-,+	OR13J1,LOC92973	7655,-1567
chr17:1359800-1360004	chr17	+	1359801	1359871	True	NM_005206,NM_016823,NR_028514	chr17,chr17,chr17	-,-,+	CRK,CRK,LOC100306951	-257,-257,60341
chr12:87172636-87173410	chr12	+	87172840	87173059	True	NM_006183,NM_013244	chr12,chr12	+,-	NTS,MGAT4C	-904818,59675
chr5:149494121-149495248	chr5	+	149494258	149495053	True	NM_005211,NM_001804	chr5,chr5	-,+	CSF1R,CDX1	-1323,51290
chr7:99644905-99646034	chr7	+	99645310	99645814	True	NM_145914,NM_017715	chr7,chr7	+,-	ZSCAN21,ZNF3	1602,33607
chr7:107768434-107770267	chr7	+	107768595	107769707	True	NM_007356,NM_000108	chr7,chr7	-,+	LAMB4,DLD	1144,-237060
chr3:128598820-128599357	chr3	+	128598825	128599259	True	NR_034179,NM_014049,NR_033426	chr3,chr3,chr3	-,+,+	LOC653712,ACAD9,ACAD9	-8441,-543,-543
chr15:78566621-78567520	chr15	+	78566715	78567468	True	NM_001130182,NM_001130183,NM_025234	chr15,chr15,chr15	+,+,-	DNAJA4,DNAJA4,WDR61	-9777,-8206,24523
chr12:8786660-8786973	chr12	+	8786775	8787009	True	NM_020661,NM_020734	chr12,chr12	-,+	AICDA,RIMKLB	-21333,63508
chr16:48723857-48724996	chr16	+	48724142	48724932	True	NM_153029,NM_031490	chr16,chr16	-,+	N4BP1,LONP2	-80022,-445982
chr4:146032566-146032988	chr4	+	146032792	146033024	True	NM_002940,NM_014885	chr4,chr4	+,-	ABCE1,ANAPC10	-13695,-13424
chr3:112559861-112560621	chr3	+	112560275	112560513	True	NM_001008784,NM_001199215,NM_014170	chr3,chr3,chr3	-,-,+	CD200R1L,CD200R1L,GTPBP8	4334,4334,149286
chr11:94820900-94822084	chr11	+	94820955	94822017	True	NM_015036,NM_016403	chr11,chr11	+,-	ENDOD1,CWC15	956,-114179
chr1:156183158-156183386	chr1	+	156183192	156183262	True	NM_001199654,NM_007221,NM_198406,NM_001199662,NM_001199663,NM_001199661,NM_001199653,NM_001199664	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,+,+,+,+,+	PMF1,PMF1,PAQR6,PMF1-BGLAP,PMF1-BGLAP,PMF1-BGLAP,PMF1,PMF1-BGLAP	-467,-467,34584,-467,-467,-467,-467,-467
chr11:64074699-64074910	chr11	+	64074703	64074959	True	NM_004451,NM_001039496,NM_016404	chr11,chr11,chr11	+,+,-	ESRRA,C11orf20,TRMT112	-1710,-6891,10124
chr16:8964409-8965433	chr16	+	8964795	8965283	True	NM_014316,NM_001042476,NM_000303	chr16,chr16,chr16	-,-,+	CARHSP1,CARHSP1,PMM2	-1932,-2547,-73188
chr15:66648817-66649148	chr15	+	66648850	66649192	True	NM_017858,NR_004388,NM_002755	chr15,chr15,chr15	-,-,+	TIPIN,SCARNA14,MAP2K1	48,-9170,30018
chr13:48667058-48667817	chr13	+	48667069	48667714	True	NM_018283,NM_014166	chr13,chr13	+,-	NUDT15,MED4	-55417,1583
chr2:23636009-23636355	chr2	+	23636008	23636407	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	513586,-27761
chr19:44031789-44032134	chr19	+	44032079	44032147	True	NM_014297,NM_174945	chr19,chr19	-,+	ETHE1,ZNF575	-683,5192
chr6:133135685-133135934	chr6	+	133135786	133135914	True	NM_052831,NR_002436,NR_002435,NM_001016,NR_002434	chr6,chr6,chr6,chr6,chr6	-,+,+,+,+	C6orf192,SNORA33,SNORD100,RPS12,SNORD101	-16039,2443,2026,-129,531
chr3:188907492-188908725	chr3	+	188907499	188908741	True	NM_198485,NM_018192	chr3,chr3	+,-	TPRG1,LEPREL1	-17791,930225
chr18:21454986-21455994	chr18	+	21455117	21455940	True	NM_000227,NM_173505,NM_001127718	chr18,chr18,chr18	+,-,+	LAMA3,ANKRD29,LAMA3	-2192,-212268,-2192
chr1:154909099-154909496	chr1	+	154909207	154909401	True	NM_001826,NM_006556	chr1,chr1	+,-	CKS1B,PMVK	37716,133
chrX:135249957-135250337	chrX	+	135249956	135250302	True	NM_001159704,NM_001173517,NM_001167819	chrX,chrX,chrX	+,-,+	FHL1,MAP7D3,FHL1	1152,83486,1493
chr8:135710677-135710936	chr8	+	135710677	135710895	True	NM_001167583,NM_001029939,NR_002438,NM_001174158	chr8,chr8,chr8,chr8	-,-,+,-	ZFAT,ZFAT,ZFAT-AS1,ZFAT	-1876,-1876,-100422,-1876
chr18:53241835-53243123	chr18	+	53241963	53243153	True	NM_001083962,NM_004163	chr18,chr18	-,+	TCF4,RAB27B	12761,-746183
chr17:73402628-73403214	chr17	+	73402696	73403074	True	NR_037449,NM_002086,NM_203506	chr17,chr17,chr17	+,-,-	MIR3678,GRB2,GRB2	-598,-907,-906
chr19:9877498-9877796	chr19	+	9877589	9877765	True	NM_001048241,NM_001077624	chr19,chr19	+,-	UBL5,ZNF846	60802,1695
chr8:108490496-108491269	chr8	+	108490913	108491301	True	NM_001198535,NM_001146	chr8,chr8	+,-	OXR1,ANGPT1	-752642,19003
chr22:39152890-39153505	chr22	+	39152960	39153484	True	NM_015374,NM_001199580,NM_001199579,NM_004286	chr22,chr22,chr22,chr22	-,-,-,+	SUN2,SUN2,SUN2,GTPBP1	-936,-1493,-936,-51211
chr1:25953142-25954889	chr1	+	25953209	25954612	True	NM_020379,NR_024498	chr1,chr1	+,-	MAN1C1,LOC646471	-9312,195545
chr19:6463756-6464204	chr19	+	6463955	6464249	True	NM_139161,NM_174881,NM_024103	chr19,chr19,chr19	+,+,-	CRB3,CRB3,SLC25A23	10,10,-4174
chr16:58665325-58665948	chr16	+	58665456	58665760	True	NM_016284,NM_206999,NM_024860	chr16,chr16,chr16	-,-,+	CNOT1,CNOT1,SETD6	-1706,-1706,-116124
chr11:64982062-64982407	chr11	+	64982106	64982454	True	NM_172230,NM_001004326,NR_033396	chr11,chr11,chr11	-,+,+	SYVN1,SLC22A20,SLC22A20	-80103,-846,-846
chr6:136610056-136610291	chr6	+	136610088	136610308	True	NM_001077441,NM_001077440,NM_018945,NM_014739	chr6,chr6,chr6,chr6	-,-,+,-	BCLAF1,BCLAF1,PDE7B,BCLAF1	731,731,-437305,731
chr5:79858380-79860261	chr5	+	79858410	79860201	True	NM_205548,NM_001004441	chr5,chr5	+,-	FAM151B,ANKRD34B	-74669,6153
chr11:120975922-120977481	chr11	+	120976122	120977522	True	NM_012101,NM_005422	chr11,chr11	-,+	TRIM29,TECTA	-967259,-2805
chr17:38024926-38026387	chr17	+	38024970	38026303	True	NM_183229,NM_183228,NM_198844,NM_183232,NM_199321,NM_183231,NM_012481,NM_183230	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,-,+,-,-,-	IKZF3,IKZF3,ZPBP2,IKZF3,ZPBP2,IKZF3,IKZF3,IKZF3	-4529,-4529,-566,-4529,-566,-4529,-4529,-4529
chr15:42449053-42449441	chr15	+	42449057	42449259	True	NM_198141,NM_213600,NR_033151	chr15,chr15,chr15	+,-,-	GANC,PLA2G4F,PLA2G4F	117106,-218,-218
chr7:119409456-119409741	chr7	+	119409456	119409793	True	NM_012281,NM_012338	chr7,chr7	+,-	KCND2,TSPAN12	503928,1088438
chr14:100624753-100625116	chr14	+	100624887	100625107	True	NM_003403,NM_206918	chr14,chr14	+,-	YY1,DEGS2	79994,955
chr2:163175119-163175398	chr2	+	163175154	163175416	True	NM_022168,NM_012198	chr2,chr2	-,+	IFIH1,GCA	-115,25166
chr4:23890115-23890320	chr4	+	23890120	23890354	True	NM_003102,NM_013261	chr4,chr4	+,-	SOD3,PPARGC1A	906730,1396
chr20:57559945-57561218	chr20	+	57559982	57561242	True	NM_001336,NM_198976	chr20,chr20	-,+	CTSZ,TH1L	21117,-3722
chr7:102312641-102313295	chr7	+	102312641	102313295	True	NM_032959,NM_001166339	chr7,chr7	-,+	POLR2J2,SPDYE2L	-459,-21920
chr7:102312641-102313295	chr7	+	44059294	44059354	False	NM_175064,NR_003655	chr7,chr7	+,-	SPDYE1,POLR2J4	-18856,-546
chr7:102312641-102313295	chr7	+	102119911	102119971	False	NM_006234,NM_152892	chr7,chr7	-,+	POLR2J,LRWD1	-530,-14572
chr7:102312641-102313295	chr7	+	102213568	102214223	False	NM_001166339,NM_001097615	chr7,chr7	+,-	SPDYE2L,POLR2J3	-21940,-500
chr14:67983019-67983978	chr14	+	67983030	67983922	True	NM_020715,NM_182526	chr14,chr14	+,-	PLEKHH1,TMEM229B	16085,-1009
chr3:125898720-125898988	chr3	+	125898916	125898976	True	NM_012190,NM_001012337	chr3,chr3	-,+	ALDH1L1,ROPN1B	559,-210939
chr3:50341620-50342765	chr3	+	50342051	50342541	True	NM_001200016,NM_001200029,NM_153281,NM_003549,NM_153282,NM_153283,NM_033159,NM_012191,NM_001200018,NM_153285,NM_007312,NM_001200030,NM_153215,NM_001200031,NM_001200032	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,-,-,-,-,-,-,-,-,+,-,-	NAT6,HYAL3,HYAL1,HYAL3,HYAL1,HYAL1,HYAL1,NAT6,NAT6,HYAL1,HYAL1,HYAL3,C3orf45,HYAL3,HYAL3	-5199,-5758,7335,-5152,-1047,-1047,-1047,-5199,-5731,-1047,-1047,-5152,-25584,-5152,-5152
chr4:25320209-25320725	chr4	+	25320479	25320729	True	NM_024936,NM_016955	chr4,chr4	+,-	ZCCHC4,SEPSECS	-6141,-158275
chr16:16028125-16029833	chr16	+	16028217	16029745	True	NM_144600,NM_004996	chr16,chr16	-,+	FOPNL,ABCC1	-45770,13688
chr13:103504504-103505202	chr13	+	103504516	103505174	True	NM_000123,NM_024089	chr13,chr13	+,-	ERCC5,KDELC1	-6387,-53112
chr15:40213581-40215484	chr15	+	40213758	40215161	True	NM_007223,NM_001013703	chr15,chr15	-,+	GPR176,EIF2AK4	-665,11185
chr20:60796505-60797266	chr20	+	60796745	60796883	True	NM_007232,NM_014835	chr20,chr20	-,+	HRH3,OSBPL2	-1422,16696
chr10:38460353-38461592	chr10	+	38460643	38461588	True	NM_145011,NR_024524	chr10,chr10	-,+	ZNF25,LOC100129055	-195190,3010
chr7:130778461-130779566	chr7	+	130779051	130779554	True	NM_001145354,NR_024153	chr7,chr7	+,-	MKLN1,FLJ43663	15300,12285
chr6:107345263-107346664	chr6	+	107346102	107346655	True	NM_001080450,NM_016487,NM_001142468,NM_001142470	chr6,chr6,chr6,chr6	-,+,+,+	BEND3,C6orf203,C6orf203,C6orf203	89031,2751,2751,2751
chrX:74143561-74143962	chrX	+	74143598	74143960	True	NM_145052,NM_001008537	chrX,chrX	+,-	UPRT,KIAA2022	349933,1377
chr17:13494206-13494454	chr17	+	13494232	13494344	True	NR_003261,NM_006042	chr17,chr17	+,-	CDRT15P,HS3ST3A1	433470,10950
chr16:24268020-24268756	chr16	+	24268094	24268790	True	NM_006539,NM_033266	chr16,chr16	+,-	CACNG3,ERN2	-1273,-543273
chr12:88973004-88973478	chr12	+	88973085	88973433	True	NM_003994,NM_000899,NM_181783	chr12,chr12,chr12	-,-,+	KITLG,KITLG,TMTC3	867,867,-437063
chr15:69606015-69607048	chr15	+	69606020	69606937	True	NM_001104554,NM_006305	chr15,chr15	+,-	PAQR5,ANP32A	22,-492759
chr4:57975006-57975357	chr4	+	57975006	57975341	True	NR_034081,NM_001553	chr4,chr4	+,-	LOC255130,IGFBP7	586,1255
chr18:29302674-29303610	chr18	+	29302681	29303545	True	NM_004775,NM_001034172,NM_000371	chr18,chr18,chr18	-,-,+	B4GALT6,MCART2,TTR	-37995,37348,-131002
chr6:4772381-4773557	chr6	+	4772414	4773429	True	NM_006638,NM_004824	chr6,chr6	-,+	RPP40,CDYL	230893,3250
chr19:49316315-49317022	chr19	+	49316507	49316983	True	NM_019113,NR_028451,NM_001164773,NR_028450,NM_001190	chr19,chr19,chr19,chr19,chr19	+,-,-,-,-	FGF21,BCAT2,BCAT2,BCAT2,BCAT2	-57214,-2329,-2187,-2187,-2187
chr1:160782729-160783975	chr1	+	160782969	160783971	True	NM_002348,NM_001166663	chr1,chr1	+,-	LY9,CD244	-17099,48771
chr12:6738762-6739862	chr12	+	6738865	6738928	True	NM_001164094,NM_001142961,NM_020400	chr12,chr12,chr12	+,-,-	COPS7A,LPAR5,LPAR5	94221,1938,6420
chr14:104311245-104312566	chr14	+	104311456	104312600	True	NM_153046,NM_015316	chr14,chr14	+,-	TDRD9,PPP1R13B	82216,1377
chr5:176518662-176519284	chr5	+	176518742	176519308	True	NM_213647,NM_022963,NM_001199298,NM_002011	chr5,chr5,chr5,chr5	+,+,-,+	FGFR4,FGFR4,UIMC1,FGFR4	-4872,-2242,-84947,-4872
chr16:731367-731770	chr16	+	731484	731696	True	NM_032259,NM_001005920,NM_003961,NM_005861	chr16,chr16,chr16,chr16	-,-,+,+	WDR24,JMJD8,RHBDL1,STUB1	8754,2793,-5460,-1420
chr19:14800351-14800621	chr19	+	14800376	14800442	True	NM_032433,NM_032571	chr19,chr19	+,-	ZNF333,EMR3	427,-14646
chr4:106470215-106470884	chr4	+	106470316	106470696	True	NM_176869,NM_017700	chr4,chr4	-,+	PPA2,ARHGEF38	-75089,3080
chr4:184837342-184838108	chr4	+	184837508	184838156	True	NM_020225,NM_152682	chr4,chr4	+,-	STOX2,RWDD4	-11050,-257177
chr6:106772804-106773206	chr6	+	106772843	106773163	True	NM_004849,NM_001624	chr6,chr6	-,+	ATG5,AIM1	582,186566
chr14:70655709-70655987	chr14	+	70655720	70656032	True	NM_058240,NM_182932,NM_033262,NM_003813,NM_183002	chr14,chr14,chr14,chr14,chr14	-,-,-,+,-	SLC8A3,SLC8A3,SLC8A3,ADAM21,SLC8A3	9,9,9,268184,9
chr15:23037531-23037876	chr15	+	23037548	23037843	True	NM_001008892,NM_001184888,NM_030922,NM_001008860,NM_001008894,NM_001033028,NM_001184889	chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,-,-,-,+,-	NIPA2,NIPA2,NIPA2,NIPA2,NIPA2,CYFIP1,NIPA2	-3121,-3121,-3121,-3121,-3121,-81858,-3121
chr7:140814461-140815221	chr7	+	140814516	140815230	True	NM_053035,NM_001195278	chr7,chr7	-,+	MRPS33,LOC100131199	-99735,-40544
chr12:50421531-50422584	chr12	+	50421627	50422148	True	NM_001126103,NM_001126104,NM_001095,NM_013277	chr12,chr12,chr12,chr12	-,-,+,-	RACGAP1,RACGAP1,ACCN2,RACGAP1	-2320,-2320,29338,-2320
chr1:156186036-156186303	chr1	+	156186200	156186290	True	NM_001199654,NM_007221,NM_198406,NM_001199662,NM_001199663,NM_001199661,NM_001199653,NM_001199664	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,+,+,+,+,+	PMF1,PMF1,PAQR6,PMF1-BGLAP,PMF1-BGLAP,PMF1-BGLAP,PMF1,PMF1-BGLAP	-3472,-3472,31552,-3472,-3472,-3472,-3472,-3472
chr7:1174224-1175122	chr7	+	1174622	1174957	True	NM_001134396,NM_001134395,NM_032350,NM_001098201	chr7,chr7,chr7,chr7	-,-,-,+	C7orf50,C7orf50,C7orf50,GPER	2993,2993,2993,-46950
chr5:76383026-76383272	chr5	+	76383132	76383310	True	NR_003014,NR_024398,NM_032367	chr5,chr5,chr5	-,+,-	SNORA47,LOC728723,ZBED3	-6736,-560,-102
chrX:15694059-15694408	chrX	+	15694155	15694400	True	NM_020665,NR_026551	chrX,chrX	-,+	TMEM27,CA5BP1	-11001,-1173
chr20:2779857-2780112	chr20	+	2779913	2780097	True	NM_080739,NM_001184699,NM_019609	chr20,chr20,chr20	+,-,-	C20orf141,CPXM1,CPXM1	15559,1245,1245
chr12:58125681-58126150	chr12	+	58125918	58126067	True	NM_001122772,NR_027032,NM_014770	chr12,chr12,chr12	-,+,-	AGAP2,LOC100130776,AGAP2	6019,-5956,9930
chr17:49337361-49337729	chr17	+	49337508	49337714	True	NM_017643,NM_016001	chr17,chr17	-,+	MBTD1,UTP18	-81,182
chr2:11503592-11504780	chr2	+	11503889	11504829	True	NM_004850,NM_014668	chr2,chr2	-,+	ROCK2,GREB1	-19178,169412
chr3:128918050-128918501	chr3	+	128918280	128918553	True	NM_003418,NM_016128	chr3,chr3	-,+	CNBP,COPG	-15470,49899
chr20:5892414-5893322	chr20	+	5892590	5893359	True	NM_001819,NM_015939	chr20,chr20	+,-	CHGB,TRMT6	-674,37875
chr1:248130379-248130689	chr1	+	248130418	248130501	True	NM_001004491,NM_001001959	chr1,chr1	+,-	OR2AK2,OR11L1	-1842,-125220
chr10:115322497-115323105	chr10	+	115322544	115323142	True	NM_006175,NM_004132	chr10,chr10	-,+	NRAP,HABP2	100715,-9818
chr16:88706749-88707325	chr16	+	88706888	88707320	True	NM_013278,NM_000101	chr16,chr16	+,-	IL17C,CYBA	-1938,10187
chr16:70562566-70562890	chr16	+	70562765	70562919	True	NM_015386,NR_037420,NR_003696,NR_003079,NM_012426,NM_001195139	chr16,chr16,chr16,chr16,chr16,chr16	-,+,+,+,+,-	COG4,MIR3647,SNORD111B,SNORD111,SF3B3,COG4	-5308,482,485,8988,-5128,-5308
chr18:45565099-45565658	chr18	+	45565098	45565686	True	NM_001142397,NM_001039360	chr18,chr18	+,-	CTIF,ZBTB7C	499740,98044
chr17:4802886-4803606	chr17	+	4802942	4803642	True	NM_000080,NM_001145536	chr17,chr17	-,+	CHRNE,C17orf107	2777,-45
chr1:36550432-36550647	chr1	+	36550435	36550673	True	NM_017825,NM_005202,NM_014466	chr1,chr1,chr1	+,-,+	ADPRHL2,COL8A2,TEKT2	3779,15227,-810
chr2:113667167-113668285	chr2	+	113667174	113668314	True	NM_173204,NM_173205,NM_173202,NM_173203,NM_000576,NM_014439	chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,-,+	IL1F7,IL1F7,IL1F7,IL1F7,IL1B,IL1F7	2233,4455,2233,2233,-72818,2233
chr11:32604449-32604724	chr11	+	32604508	32604590	True	NM_024426,NM_006360	chr11,chr11	-,+	WT1,EIF3M	-147427,800
chr18:45571736-45571992	chr18	+	45571762	45571994	True	NM_001142397,NM_001039360	chr18,chr18	+,-	CTIF,ZBTB7C	493432,91736
chr3:178988052-178988731	chr3	+	178988367	178988665	True	NM_016331,NM_171828,NM_001163677	chr3,chr3,chr3	+,-,-	ZNF639,KCNMB3,KCNMB3	52885,-3529,-3529
chrX:13354077-13355384	chrX	+	13354139	13355136	True	NM_001167890,NM_001135995	chrX,chrX	+,-	EGFL6,ATXN3L	232557,-15621
chr22:24642080-24642831	chr22	+	24642181	24642571	True	NM_001099782,NM_001099781,NM_004121,NR_003714	chr22,chr22,chr22,chr22	-,-,-,+	GGT5,GGT5,GGT5,POM121L9P	-1071,-1071,-1071,5017
chr22:24642080-24642831	chr22	+	18758735	18759753	False	NM_017414,NR_003267	chr22,chr22	+,-	USP18,GGT3P	-126996,20739
chr22:24642080-24642831	chr22	+	20363768	20364786	False	NR_003563,NR_026919	chr22,chr22	-,+	PI4KAP1,LOC150197	34927,-170932
chr22:24642080-24642831	chr22	-	20617782	20618800	False	NM_015672,NM_003426	chr22,chr22	-,+	RIMBP3,ZNF74	-155996,129679
chr2:3704920-3705199	chr2	+	3704954	3705220	True	NM_002936,NM_018436	chr2,chr2	-,+	RNASEH1,ALLC	-99014,565
chr3:169580920-169582580	chr3	+	169581319	169582363	True	NM_001080460,NM_024727	chr3,chr3	+,-	LRRIQ4,LRRC31	-41660,5354
chr19:33620573-33621920	chr19	+	33620873	33621705	True	NM_173479,NM_033103	chr19,chr19	+,-	WDR88,RHPN2	1292,-65049
chr5:219906-220791	chr5	+	219942	220664	True	NM_004168,NM_145265	chr5,chr5	+,-	SDHA,CCDC127	-1637,-1645
chr2:101447616-101448921	chr2	+	101447788	101448940	True	NM_001102426,NM_002518	chr2,chr2	-,+	TBC1D8,NPAS2	318956,-11226
chr19:59033924-59034738	chr19	+	59034019	59034671	True	NM_032792,NM_005762	chr19,chr19	-,+	ZBTB45,TRIM28	-3098,21164
chrX:97905141-97906076	chrX	+	97905242	97906086	True	NR_024608,NM_013347	chrX,chrX	-,+	LOC442459,RPA4	1288813,-1766394
chr19:19314326-19314623	chr19	+	19314327	19314468	True	NM_176880,NM_004386	chr19,chr19	-,+	NR2C2AP,NCAN	-89,8313
chr16:2909118-2909655	chr16	+	2909507	2909592	True	NM_001142499,NM_022119	chr16,chr16	+,-	FLYWCH2,PRSS22	23603,-1336
chr3:56695409-56696080	chr3	+	56695496	56695714	True	NR_024460,NM_015224	chr3,chr3	+,-	CCDC66,C3orf63	-104370,2420
chr22:25958305-25960136	chr22	+	25958973	25959786	True	NM_001135772,NM_005160	chr22,chr22	-,+	LRP5L,ADRBK2	-181429,1074
chr2:152210261-152211703	chr2	+	152210443	152211527	True	NM_007115,NM_004688	chr2,chr2	+,-	TNFAIP6,NMI	2578,-64013
chr6:2246256-2246489	chr6	+	2246308	2246528	True	NM_001500,NM_020135	chr6,chr6	-,+	GMDS,WRNIP1	-462,519137
chr1:4039169-4039691	chr1	+	4039269	4039727	True	NR_024455,NM_207356	chr1,chr1	+,-	LOC100133612,C1orf174	-222352,-222412
chr1:45670894-45671338	chr1	+	45670974	45671087	True	NM_020883,NR_024270	chr1,chr1	-,+	ZSWIM5,LOC400752	1214,98494
chr1:44818547-44819537	chr1	+	44818679	44819428	True	NM_018150,NM_024066	chr1,chr1	+,-	RNF220,ERI3	51531,1569
chr12:53688689-53689226	chr12	+	53688880	53689165	True	NM_021640,NM_002624,NM_001173466,NM_145897	chr12,chr12,chr12,chr12	+,+,-,+	C12orf10,PFDN5,AAAS,PFDN5	4304,69,26298,69
chr18:57366033-57367491	chr18	+	57366262	57367426	True	NM_133459,NM_021127	chr18,chr18	-,+	CCBE1,PMAIP1	-1618,199765
chr12:52885598-52886622	chr12	+	52885702	52886521	True	NM_002284,NM_005554	chr12,chr12	+,-	KRT86,KRT6A	-190104,710
chr1:150510623-150510921	chr1	+	150510634	150510857	True	NM_001197320,NM_025008	chr1,chr1	-,+	MCL1,ADAMTSL4	41412,11040
chrX:47095030-47095605	chrX	+	47095058	47095620	True	NR_024235,NM_004651	chrX,chrX	-,+	NDUFB11,USP11	-90449,-2800
chr5:72022492-72023649	chr5	+	72022540	72023460	True	NM_152625,NM_002270	chr5,chr5	-,+	ZNF366,TNPO1	-219291,88957
chr1:91183248-91183459	chr1	+	91183400	91183506	True	NM_020063,NM_182976	chr1,chr1	-,+	BARHL2,ZNF326	-606,-722773
chr2:182322758-182322978	chr2	+	182322878	182322976	True	NM_001030311,NM_000885	chr2,chr2	-,+	CERKL,ITGA4	198908,-1310
chr2:27577620-27578109	chr2	+	27577666	27578117	True	NM_001035521,NM_001521,NM_014748	chr2,chr2,chr2	-,-,+	GTF3C2,GTF3C2,SNX17	1802,1802,15271
chr11:9628773-9629237	chr11	+	9628793	9629189	True	NR_036539,NM_001143976	chr11,chr11	-,+	LOC644656,WEE1	-146548,-32610
chr16:67311928-67312315	chr16	+	67312041	67312317	True	NM_013241,NM_015432,NM_001129728,NM_001129729,NM_001129727,NM_001129731	chr16,chr16,chr16,chr16,chr16,chr16	-,+,+,+,+,+	FHOD1,PLEKHG4,PLEKHG4,PLEKHG4,PLEKHG4,PLEKHG4	-30616,-679,732,1171,-16,1174
chrX:14048306-14048970	chrX	+	14048467	14049009	True	NM_001042480,NM_003611,NM_001042479,NM_017856	chrX,chrX,chrX,chrX	-,+,-,-	GEMIN8,OFD1,GEMIN8,GEMIN8	-432,-295693,-432,-432
chr6:57187232-57189192	chr6	+	57187554	57189158	True	NM_016277,NM_000947	chr6,chr6	-,+	RAB23,PRIM2	-100476,-5183
chr6:26660142-26661337	chr6	+	26660169	26661150	True	NM_013375,NM_024639	chr6,chr6	+,-	ABT1,ZNF322A	-63040,-206
chr19:46390201-46391592	chr19	+	46390385	46391429	True	NM_004497,NM_015649	chr19,chr19	+,-	FOXA3,IRF2BP1	-22918,-1009
chr11:70117342-70117590	chr11	+	70117504	70117574	True	NM_133266,NM_003626,NM_177423	chr11,chr11,chr11	-,+,+	SHANK2,PPFIA1,PPFIA1	390405,-733,-733
chr10:75504697-75505397	chr10	+	75504732	75505294	True	NM_198597,NR_026592,NM_004922	chr10,chr10,chr10	+,-,+	SEC24C,BMS1P4,SEC24C	-656,-14460,-656
chr1:182303617-182305063	chr1	+	182303792	182304746	True	NR_034131,NM_001033056	chr1,chr1	+,-	NCRNA00272,GLUL	72009,55843
chr14:23510013-23511328	chr14	+	23510609	23511343	True	NM_001099780,NM_001144932,NM_002797,NM_001130725	chr14,chr14,chr14,chr14	+,-,-,-	PSMB11,PSMB5,PSMB5,PSMB5	32,-6255,-6255,-6180
chr16:89006620-89006893	chr16	+	89006726	89006896	True	NM_175931,NM_016209	chr16,chr16	-,+	CBFA2T3,TRAPPC2L	762,-83271
chr9:43132710-43133143	chr9	+	43132886	43133146	True	NM_001012419,NR_026558,NM_001012421	chr9,chr9,chr9	-,+,-	ANKRD20A3,AQP7P3,ANKRD20A2	448,-274792,448
chr9:43132710-43133143	chr9	-	42368898	42368960	False	NR_003670,NM_001012419,NM_001012421	chr9,chr9,chr9	-,+,+	KGFLP2,ANKRD20A3,ANKRD20A2	-349314,-650,-650
chr9:43132710-43133143	chr9	-	67927356	67927418	False	NR_027422,NM_001012419,NM_032250	chr9,chr9,chr9	-,+,+	FAM27B,ANKRD20A3,ANKRD20A1	-133167,-650,-650
chr9:43132710-43133143	chr9	-	69382576	69382638	False	NM_001085457,NM_001098805	chr9,chr9	-,+	CBWD6,ANKRD20A4	-119983,-650
chr5:70316913-70317453	chr5	+	70316912	70317127	True	NM_004536,NM_022892,NM_022877	chr5,chr5,chr5	-,-,+	NAIP,NAIP,SMN2	3871,3871,-96199
chr5:70316913-70317453	chr5	-	68902400	68902615	False	NR_027439,NM_001042490	chr5,chr5	-,+	LOC100272216,GTF2H2D	26467,-46384
chr5:70316913-70317453	chr5	-	69757544	69757759	False	NR_033417,NR_033968	chr5,chr5	+,-	GTF2H2B,LOC100049076	-46405,93445
chr22:37417636-37418475	chr22	+	37417803	37418517	True	NM_001013436,NR_024038,NM_021126,NM_003312,NM_001130517	chr22,chr22,chr22,chr22,chr22	+,+,+,-,+	MPST,MPST,MPST,TST,MPST	-2157,-2157,-2157,-2312,-2157
chr14:73525003-73525212	chr14	+	73525017	73525145	True	NM_021239,NM_021260	chr14,chr14	+,-	RBM25,ZFYVE1	75,-31097
chr6:36410266-36410664	chr6	+	36410366	36410614	True	NM_173562,NM_152990	chr6,chr6	+,-	KCTD20,PXT1	-7,102
chr14:61200285-61201395	chr14	+	61200397	61201397	True	NM_002431,NM_001177963,NM_017420	chr14,chr14,chr14	+,+,-	MNAT1,MNAT1,SIX4	61,61,-9545
chr18:68097166-68097479	chr18	+	68097199	68097455	True	NM_173630,NM_004232	chr18,chr18	-,+	RTTN,SOCS6	-224237,-141113
chrX:30876442-30877751	chrX	+	30876548	30877689	True	NM_203391,NM_152787	chrX,chrX	+,-	GK,TAB3	-205126,29872
chr14:100845217-100845815	chr14	+	100845402	100845719	True	NM_001161476,NM_173701,NM_024515,NM_004184,NM_213646,NM_213645	chr14,chr14,chr14,chr14,chr14,chr14	+,-,+,-,-,-	WDR25,WARS,WDR25,WARS,WARS,WARS	-2698,-2722,-2620,-3475,-3475,-2722
chrX:18365734-18366454	chrX	+	18366185	18366470	True	NM_006089,NR_033717,NM_003159	chrX,chrX,chrX	-,-,+	SCML2,SCML2,CDKL5	6431,6431,77254
chrX:64166336-64168115	chrX	+	64166591	64168154	True	NM_001178033,NM_001010888	chrX,chrX	-,+	ZC4H2,ZC3H12B	28310,540460
chrY:14451911-14452335	chrY	+	14452097	14452158	True	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	322139,81282
chr4:145579612-145580765	chr4	+	145580026	145580779	True	NR_037595,NM_022475	chr4,chr4	-,+	LOC646576,HHIP	-12855,-12930
chr5:179127164-179127954	chr5	+	179127174	179127848	True	NM_001746,NM_001164444,NM_001024649	chr5,chr5,chr5	+,-,+	CANX,CBY3,CANX	-1295,-19199,-1295
chr15:72761668-72763077	chr15	+	72761945	72762715	True	NM_000520,NM_005744	chr15,chr15	-,+	HEXA,ARIH1	-93425,3951
chr21:14982522-14983074	chr21	+	14982540	14982962	True	NR_036164,NM_174981	chr21,chr21	-,+	MIR3156-3,POTED	-203759,-93
chr9:130332183-130333052	chr9	+	130332420	130333090	True	NM_001032221,NM_022833,NM_001035534	chr9,chr9,chr9	+,-,-	STXBP1,FAM129B,FAM129B	41395,-1065,8228
chr6:73973175-73974638	chr6	+	73973487	73974661	True	NM_001017361,NM_030568	chr6,chr6	+,-	C6orf221,KHDC1	97738,-580
chr5:35910527-35912197	chr5	+	35910594	35911646	True	NM_002185,NM_001042625	chr5,chr5	+,-	IL7R,CAPSL	-53662,27148
chr22:30867863-30868836	chr22	+	30868063	30868663	True	NR_001580,NM_174975,NM_016498	chr22,chr22,chr22	-,-,+	SDC4P,SEC14L3,MTFP1	9130,-29,-46510
chr7:27493675-27495532	chr7	+	27493705	27495111	True	NM_001989,NM_152740	chr7,chr7	+,-	EVX1,HIBADH	-211592,207559
chr1:183972979-183974285	chr1	+	183973019	183974050	True	NM_015101,NM_001127394	chr1,chr1	-,+	GLT25D2,TSEN15	32863,46760
chr22:26825677-26825910	chr22	+	26825846	26825936	True	NM_152841,NM_020437	chr22,chr22	-,+	HPS4,ASPHD2	49665,-617
chr3:133648439-133649996	chr3	+	133648455	133649833	True	NM_021203,NM_025041	chr3,chr3	+,-	SRPRB,C3orf36	-145629,-11
chr1:14706457-14707856	chr1	+	14706583	14707844	True	NM_015209,NR_027136	chr1,chr1	+,-	KAZN,C1orf126	217368,771166
chr5:134239107-134239406	chr5	+	134239121	134239260	True	NM_032151,NM_002653	chr5,chr5	+,-	PCBD2,PITX1	1549,130763
chr9:108419690-108420433	chr9	+	108419791	108420463	True	NM_005502,NM_005421	chr9,chr9	-,+	ABCA1,TAL2	-729264,4274
chr6:31432600-31433864	chr6_mcf_hap5	+	2812416	2813309	False	NR_002812,NM_006674,NR_003140	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	+,+,-	HCG26,HCP5,SNORD117	5476,-563,70724
chr6:31432600-31433864	chr6	+	31432635	31433528	True	NR_002812,NM_006674,NR_003140	chr6,chr6,chr6	+,+,-	HCG26,HCP5,SNORD117	5477,-1729,70755
chr6:31432600-31433864	chr6_ssto_hap7	+	2763405	2764298	False	NR_002812,NM_006674,NR_003140	chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7	+,+,-	HCG26,HCP5,SNORD117	5473,-1729,70790
chr6:31432600-31433864	chr6_cox_hap2	+	2942289	2943182	False	NR_002812,NM_006674,NR_003140	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,+,-	HCG26,HCP5,SNORD117	5477,-1729,70763
chr19:39233118-39233582	chr19	+	39233122	39233630	True	NM_144691,NM_001042507	chr19,chr19	-,+	CAPN12,LGALS7B	1534,46219
chr20:56285358-56285653	chr20	+	56285506	56285678	True	NM_020182,NM_199169,NM_002591,NM_199170,NM_199171	chr20,chr20,chr20,chr20,chr20	-,-,+,-,-	PMEPA1,PMEPA1,PCK1,PMEPA1,PMEPA1	-475,1,-149420,1,913
chrX:152684872-152686160	chrX	+	152684935	152686161	True	NM_001136273,NM_080701	chrX,chrX	+,-	ZFP92,TREX2	-1205,25834
chr14:105287868-105288226	chr14	+	105287898	105288266	True	NR_024396,NM_001014432	chr14,chr14	+,-	MGC23270,AKT1	-411,-25818
chr11:17250493-17250845	chr11	+	17250506	17250704	True	NM_002645,NM_005013	chr11,chr11	-,+	PIK3C2A,NUCB2	-59152,47581
chr1:155026250-155026978	chr1	+	155026322	155026894	True	NM_144622,NM_207191,NM_207196,NM_207197,NM_207194,NM_207195,NM_003815,NM_182690,NM_005227,NM_182689	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,+,+,+,+,+,+,+	DCST2,ADAM15,ADAM15,ADAM15,ADAM15,ADAM15,ADAM15,EFNA4,EFNA4,EFNA4	-20065,-2611,-2611,-2611,-2611,-2611,-2611,9318,9318,9318
chr16:84331145-84331805	chr16	+	84331331	84331704	True	NM_021197,NM_172347	chr16,chr16	+,-	WFDC1,KCNG4	-2981,-57975
chr9:137968228-137968472	chr9	+	137968270	137968520	True	NM_014279,NM_006334,NM_002003	chr9,chr9,chr9	+,+,-	OLFM1,OLFM1,FCN1	-1232,-1218,-158464
chr5:178367815-178368044	chr5	+	178367884	178367992	True	NM_182594,NM_000843,NM_001178090,NM_001178089	chr5,chr5,chr5,chr5	+,-,+,+	ZNF454,GRM6,ZNF454,ZNF454	201,54182,201,201
chr9:33165928-33166343	chr9	+	33165927	33166335	True	NM_001497,NM_014471	chr9,chr9	-,+	B4GALT1,SPINK4	1071,73860
chr19:8480478-8481080	chr19	+	8480660	8480950	True	NM_016496,NM_001005416,NM_001005415,NM_198471	chr19,chr19,chr19,chr19	+,+,+,-	MARCH2,MARCH2,MARCH2,KANK3	-2524,-2524,-2524,-72514
chr4:81119196-81119479	chr4	+	81119357	81119435	True	NM_001099403,NM_001145794	chr4,chr4	+,-	PRDM8,ANTXR2	-751,-124880
chr22:38449668-38450759	chr22	+	38449820	38450588	True	NM_013356,NM_001039584,NM_012407,NM_001039583	chr22,chr22,chr22,chr22	-,+,+,+	SLC16A8,PICK1,PICK1,PICK1	28640,2673,2673,2673
chr14:20124646-20125610	chr22	+	16392609	16393266	False	NM_001005239,NR_001591	chr22,chr22	-,+	OR11H1,psiTPTE22	56588,689534
chr14:20124646-20125610	chr14	+	20124910	20125567	True	NM_001197287,NM_172194	chr14,chr14	-,+	OR11H2,OR4Q3	56974,90019
chr14:20124646-20125610	chr14	-	19440062	19440719	False	NM_001145442,NM_001013354	chr14,chr14	-,+	POTEM,OR11H12	579611,-62519
chr2:198062254-198063235	chr2	+	198062612	198063218	True	NM_001195144,NM_025147	chr2,chr2	-,+	ANKRD44,COQ10B	112353,255012
chr13:95952254-95952875	chr13	+	95952407	95952911	True	NM_001105515,NM_005845,NM_001160100	chr13,chr13,chr13	-,-,+	ABCC4,ABCC4,CLDN10	826,826,132941
chr1:158736088-158736310	chr1	+	158736087	158736245	True	NM_001005185,NM_001005184	chr1,chr1	-,+	OR6N1,OR6K6	277,-11532
chr1:183155543-183156476	chr1	+	183155632	183156488	True	NM_018891,NM_170706,NM_005562	chr1,chr1,chr1	+,-,+	LAMC2,NMNAT2,LAMC2	-509,117578,-509
chr20:44037622-44038603	chr20	+	44037725	44038537	True	NM_015937,NM_001184730,NM_001197140,NM_014477,NM_001184729,NM_001184728,NM_001197139,NM_001048226,NM_001048225,NM_001048224,NM_001048223,NM_001048222,NM_001048221,NM_018478	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,+,+,-,+,+,+,+,+,+,+,+,+,+	PIGT,PIGT,DBNDD2,TP53TG5,PIGT,PIGT,DBNDD2,DBNDD2,DBNDD2,DBNDD2,DBNDD2,DBNDD2,DBNDD2,DBNDD2	6169,6169,-2955,-30768,6169,6169,-3143,-1147,-1147,-2548,-2548,-3121,-3121,-2915
chr7:102072338-102073043	chr7	+	102072344	102072464	True	NM_017621,NM_032831,NM_001126340	chr7,chr7,chr7	-,+,+	ALKBH4,ORAI2,ORAI2	32907,1531,1531
chr6:24402122-24403223	chr6	+	24402348	24403090	True	NM_001195610,NM_020662	chr6,chr6	-,+	DCDC2,MRS2	-18828,62
chr22:21400962-21401696	chr22	+	21401431	21401725	True	NR_002829,NR_027006	chr22,chr22	-,+	P2RX6P,LOC400891	-2893,-1240
chr7:30214725-30215083	chr7	+	30214868	30215112	True	NM_152793,NR_037513	chr7,chr7	+,-	C7orf41,MIR550B1	-40375,114444
chr11:113750607-113752290	chr11	+	113751397	113752009	True	NM_006028,NM_020886	chr11,chr11	+,-	HTR3B,USP28	23579,-5141
chr19:5789011-5789309	chr19	+	5789131	5789233	True	NM_020175,NM_001134316,NM_001161619,NM_004558	chr19,chr19,chr19,chr19	-,-,-,+	DUS3L,PRR22,DUS3L,NRTN	2066,-4355,2066,34584
chr22:42474748-42474972	chr22	+	42474768	42475016	True	NM_033318,NM_001002034,NM_000262	chr22,chr22,chr22	+,+,-	C22orf32,FAM109B,NAGA	682,-4564,-7922
chr2:207135114-207135384	chr2	+	207135115	207135246	True	NM_020923,NM_005279	chr2,chr2	+,-	ZDBF2,GPR1	4276,-52344
chr9:33403453-33403671	chr9	+	33403476	33403710	True	NM_001170,NM_002504	chr9,chr9	-,+	AQP7,NFX1	-959,-113109
chr4:683204-683525	chr4	+	683208	683574	True	NM_002477,NM_032219	chr4,chr4	+,-	MYL5,MFSD7	-11548,-235
chr3:125554282-125555771	chr3	+	125554546	125555390	True	NR_024250,NR_031687	chr3,chr3	+,-	LOC100125556,MIR548I1	80053,-45151
chr6:106773679-106774170	chr6	+	106773783	106774144	True	NM_004849,NM_001624	chr6,chr6	-,+	ATG5,AIM1	-88,185585
chr4:37690221-37692050	chr4	+	37690528	37691800	True	NM_001085400,NM_018302,NM_001085399	chr4,chr4,chr4	-,+,-	RELL1,C4orf19,RELL1	-2529,-104726,-2529
chr11:64511784-64512037	chr11	+	64511824	64511950	True	NM_001098671,NM_001098670,NM_153378,NM_153819	chr11,chr11,chr11,chr11	-,-,+,-	RASGRP2,RASGRP2,SLC22A12,RASGRP2	-194,429,-153593,1028
chr11:63997833-63998123	chr11	+	63997890	63997998	True	NM_031472,NM_001160389,NM_001033678,NM_032344,NM_005528,NM_003377,NM_001160392,NM_001160393,NM_001160390,NM_001128613,NM_001128612	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,+,+,+,-,-,-,+,+	TRPT1,TRPT1,TRPT1,NUDT22,DNAJC4,VEGFB,TRPT1,TRPT1,TRPT1,NUDT22,NUDT22	-4164,-4164,-4164,-4203,-188,4267,-4164,-4549,-4164,-4203,-4203
chr19:33715494-33716256	chr19	+	33715583	33716143	True	NM_002333,NM_019849	chr19,chr19	+,-	LRP3,SLC7A10	-30035,663
chr14:24506508-24506871	chr14	+	24506565	24506859	True	NM_006177,NM_001082488	chr14,chr14	-,+	NRL,DHRS4L1	47023,-906
chr12:53012143-53012941	chr12	+	53012331	53012729	True	NM_002284,NM_175068	chr12,chr12	+,-	KRT86,KRT73	-316733,12
chr15:40209968-40211756	chr15	+	40210309	40211760	True	NM_007223,NM_001013703	chr15,chr15	-,+	GPR176,EIF2AK4	1383,14586
chr1:95595152-95596001	chr1	+	95595303	95596049	True	NM_001199691,NM_144988	chr1,chr1	+,-	TMEM56-RWDD3,ALG14	-11881,-56796
chr1:145505855-145506262	chr1	+	145506081	145506279	True	NR_002328,NM_005105,NM_003846	chr1,chr1,chr1	-,+,+	GNRHR2,RBM8A,PEX11B	9847,1277,9885
chr17:1393714-1394199	chr17	+	1393921	1394037	True	NM_001080779,NM_001080950,NR_028514,NM_033375	chr17,chr17,chr17,chr17	-,-,+,-	MYO1C,MYO1C,LOC100306951,MYO1C	2014,-4870,26175,985
chr17:17398017-17398217	chr17	+	17398044	17398192	True	NM_016084,NM_018019,NM_001199989	chr17,chr17,chr17	-,+,-	RASD1,MED9,RASD1	1567,-17795,1567
chr4:25531795-25532181	chr4	+	25531898	25532204	True	NM_015187,NM_001177998	chr4,chr4	-,+	SEL1L3,SLC34A2	332456,125230
chr4:4387947-4388495	chr4	+	4388016	4388194	True	NM_017816,NM_014392,NM_001040101	chr4,chr4,chr4	-,+,+	LYAR,D4S234E,D4S234E	-96120,-84,-84
chr20:58519157-58519923	chr20	+	58519264	58519934	True	NM_022106,NM_001190827,NM_006242	chr20,chr20,chr20	+,+,-	C20orf177,C20orf177,PPP1R3D	-3871,-3871,-3912
chr20:62367590-62368401	chr20	+	62367595	62368337	True	NM_020062,NM_003224,NM_017806	chr20,chr20,chr20	+,-,+	SLC2A4RG,ARFRP1,LIME1	2873,-28240,90
chr15:56365579-56366017	chr15	+	56365974	56366064	True	NM_198524,NM_006154	chr15,chr15	+,-	TEX9,NEDD4	291579,-80139
chr7:855135-855363	chr7	+	855262	855382	True	NM_025154,NM_001164759,NM_001171945,NM_001171944,NM_001171946	chr7,chr7,chr7,chr7,chr7	+,-,+,+,+	SUN1,PRKAR1B,SUN1,SUN1,SUN1	869,-87949,869,869,-127
chr19:4669484-4669711	chr19	+	4669669	4669735	True	NM_001167942,NM_019107	chr19,chr19	+,-	TNFAIP8L1,C19orf10	-29691,730
chr2:242127606-242127946	chr2	+	242127673	242127963	True	NM_015148,NM_001001666,NM_001001891	chr2,chr2,chr2	-,+,+	PASK,ANO7,ANO7	-38795,-40,-40
chr2:176949386-176949628	chr2	+	176949483	176949629	True	NM_001080458,NM_000523	chr2,chr2	-,+	EVX2,HOXD13	-793,7902
chr14:50981094-50982014	chr14	+	50981288	50982034	True	NM_001127713,NM_006575	chr14,chr14	+,-	ATL1,MAP4K5	17765,17392
chr1:238025869-238026726	chr1	+	238025896	238026653	True	NR_027247,NM_021186	chr1,chr1	+,-	LOC100130331,ZP4	-472,27626
chr14:81989989-81991140	chr14	+	81990087	81990896	True	NM_005065,NM_000369	chr14,chr14	-,+	SEL1L,TSHR	9366,-568270
chr11:2164081-2164619	chr11	+	2164193	2164661	True	NM_001127598,NR_028043,NM_000612,NR_030158,NM_001007139,NR_028044	chr11,chr11,chr11,chr11,chr11,chr11	-,+,-,-,-,+	IGF2,IGF2AS,IGF2,MIR483,IGF2,IGF2AS	-1852,-2486,-3989,-8754,6222,-2486
chr3:189839113-189839355	chr3	+	189839164	189839371	True	NM_001134418,NM_006580,NM_018192	chr3,chr3,chr3	-,+,-	LEPREL1,CLDN16,LEPREL1	905,266289,-256
chr7:150689698-150690077	chr7	+	150689722	150690094	True	NM_172056,NM_000603,NM_001160110,NM_001160111,NM_001160109	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	KCNH2,NOS3,NOS3,NOS3,NOS3	-14320,-1629,797,797,797
chr10:25238142-25238754	chr10	+	25238348	25238605	True	NM_020200,NM_024838	chr10,chr10	-,+	PRTFDC1,THNSL1	2979,66902
chr11:64885834-64886094	chr11	+	64885911	64886055	True	NM_001997,NR_037568,NR_037567,NM_014205,NM_003273,NM_004927	chr11,chr11,chr11,chr11,chr11,chr11	-,+,+,-,+,+	FAU,MRPL49,MRPL49,ZNHIT2,TM7SF2,MRPL49	3677,3660,3599,-741,-6631,3660
chr12:132904846-132905355	chr12	+	132904965	132905313	True	NM_001122636,NR_024563	chr12,chr12	-,+	GALNT9,LOC100130238	642,-53039
chr21:34398980-34399236	chr21	+	34398993	34399255	True	NR_024102,NM_005806	chr21,chr21	-,+	C21orf54,OLIG2	143336,-805
chr16:80580579-80582473	chr16	+	80580787	80581980	True	NM_152342,NM_130897	chr16,chr16	-,+	CDYL2,DYNLRB2	256246,-5984
chr16:33364371-33365518	chr16	+	33364723	33365424	True	NR_033866,NM_001205265	chr16,chr16	-,+	LOC390705,TP53TG3B	-66021,-102654
chr7:99680063-99680926	chr7	+	99680262	99680743	True	NM_032924,NM_006833,NM_017715	chr7,chr7,chr7	-,+,-	ZNF3,COPS6,ZNF3	-891,5839,-891
chr9:136023080-136023445	chr9	+	136023125	136023415	True	NR_001275,NM_001042368	chr9,chr9	+,-	CELP,RALGDS	-65250,1223
chr1:211513693-211515037	chr1	+	211513950	211514884	True	NM_001164688,NM_145759	chr1,chr1	-,+	RD3,TRAF5	151425,4821
chr8:16858528-16858738	chr8	+	16858614	16858732	True	NM_181723,NM_019851	chr8,chr8	+,-	EFHA2,FGF20	26014,992
chr7:28218247-28218547	chr7	+	28218306	28218587	True	NR_034097,NM_175061	chr7,chr7	+,-	LOC100128081,JAZF1	1488,1907
chr1:104665217-104667099	chr1	+	104665460	104666812	True	NM_001008221,NR_033990	chr1,chr1	-,+	AMY1A,LOC100129138	-426387,-49874
chr7:73095020-73096004	chr7	+	73095141	73096010	True	NR_037776,NM_017528,NM_001202560,NM_032317	chr7,chr7,chr7,chr7	+,+,+,-	WBSCR22,WBSCR22,WBSCR22,DNAJC30	1887,1887,1887,1821
chrX:109257790-109258255	chrX	+	109257814	109258293	True	NM_032227,NR_004379	chrX,chrX	+,-	TMEM164,SNORD96B	-11524,210046
chr3:150669920-150671598	chr3	+	150669925	150671119	True	NR_024066,NM_052995	chr3,chr3	+,-	CLRN1OS,CLRN1	19345,-7902
chr11:78280139-78281352	chr11	+	78280193	78281333	True	NR_027479,NM_024678,NM_020798	chr11,chr11,chr11	-,-,+	NARS2,NARS2,USP35	4633,4633,-380395
chr1:161476378-161477730	chr1	+	161476579	161477571	True	NM_000569,NM_021642,NM_001136219	chr1,chr1,chr1	-,+,+	FCGR3A,FCGR2A,FCGR2A	42309,-1425,-1425
chr14:92587428-92587690	chr14	+	92587526	92587614	True	NM_004545,NM_017437	chr14,chr14	-,+	NDUFB1,CPSF2	589,683
chr6:33548058-33549495	chr6	+	33548306	33548872	True	NR_028361,NM_001188	chr6,chr6	+,-	GGNBP1,BAK1	2603,-236
chr1:16957492-16957873	chr1	+	16957564	16957828	True	NR_026752,NR_027504	chr1,chr1	-,+	CROCCP2,MST1P2	-163,14240
chr11:63954541-63954825	chr11	+	63954557	63954837	True	NM_006819,NM_014067	chr11,chr11	+,-	STIP1,MACROD1	-1022,-20972
chr10:35494606-35495903	chr10	+	35495336	35495874	True	NM_001198777,NM_182725	chr10,chr10	-,+	CUL2,CREM	-115766,-10557
chr14:102784294-102785130	chr14	+	102784331	102785171	True	NM_014226,NM_018335	chr14,chr14	-,+	RAGE,ZNF839	-12800,924
chr10:64565500-64565788	chr10	+	64565569	64565765	True	NM_000399,NM_032804	chr10,chr10	-,+	EGR2,ADO	10411,-1104
chr21:26966721-26968456	chr21	+	26966943	26968207	True	NR_024092,NR_030784,NM_017446	chr21,chr21,chr21	-,+,-	C21orf71,MIR155,MRPL39	-11407,-20702,11651
chr19:18724993-18725883	chr19	+	18725070	18725780	True	NM_012109,NM_004750	chr19,chr19	+,-	TMEM59L,CRLF1	-1439,-7410
chr15:84323457-84323697	chr15	+	84323473	84323677	True	NM_207517,NM_001717	chr15,chr15	+,-	ADAMTSL3,BNC1	-686,-370005
chr19:47126982-47127274	chr19	+	47127021	47127287	True	NM_000960,NM_005184	chr19,chr19	-,+	PTGIR,CALM3	1117,-22560
chr1:113250703-113251267	chr1	+	113250946	113251290	True	NM_001042678,NM_001042679,NM_005167,NM_001004440,NM_175744	chr1,chr1,chr1,chr1,chr1	-,-,-,+,-	RHOC,RHOC,PPM1J,FAM19A3,RHOC	-921,-1268,6710,11898,-921
chr6:41007624-41009568	chr6	+	41007665	41008835	True	NM_173561,NM_001010873,NM_001159726	chr6,chr6,chr6	-,+,+	UNC5CL,TSPO2,TSPO2	-727,1401,1621
chr19:38806872-38807594	chr19	+	38807136	38807642	True	NM_001145462,NM_001145461,NM_001039671,NM_001039672,NM_001039673,NM_033557,NM_001145463,NM_004823	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,+	YIF1B,YIF1B,YIF1B,YIF1B,YIF1B,YIF1B,YIF1B,KCNK6	-691,-691,-691,-530,-530,-6627,-530,2841
chr20:50182446-50182857	chr20	+	50182464	50182802	True	NM_014484,NM_001136021	chr20,chr20	+,-	MOCS3,NFATC2	-607152,-3296
chr14:70917639-70919376	chr14	+	70917833	70919055	True	NR_037933,NM_003813	chr14,chr14	-,+	C14orf55,ADAM21	31478,5161
chr1:59611383-59612595	chr1	+	59611558	59612423	True	NR_027120,NM_001113411	chr1,chr1	-,+	LOC729467,FGGY	106,150201
chr17:11900833-11901583	chr17	+	11900948	11901566	True	NM_144680,NM_003010	chr17,chr17	-,+	ZNF18,MAP2K4	-259,22568
chr11:57308475-57308886	chr11	+	57308480	57308812	True	NM_012456,NM_001105565	chr11,chr11	-,+	TIMM10,SMTNL1	-10248,1301
chr6:33291053-33292381	chr6_qbl_hap6	+	4523609	4524570	False	NM_001145338,NM_001350,NM_172208,NM_001185181,NM_005453,NM_172209,NM_001141970,NM_003190,NM_001141969	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,TAPBP,PFDN6,ZBTB22,TAPBP,DAXX,TAPBP,DAXX	-5643,-567,-9199,-34005,-5850,-9199,-567,-9199,-567
chr6:33291053-33292381	chr6_mcf_hap5	+	4765102	4766064	False	NM_001145338,NM_001350,NM_172208,NM_001185181,NM_005453,NM_172209,NM_001141970,NM_003190,NM_001141969	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,TAPBP,PFDN6,ZBTB22,TAPBP,DAXX,TAPBP,DAXX	-5640,-567,-9196,-33997,-5847,-9196,-567,-9196,-567
chr6:33291053-33292381	chr6_cox_hap2	+	4735178	4736139	False	NM_001145338,NM_001350,NM_172208,NM_001185181,NM_005453,NM_172209,NM_001141970,NM_003190,NM_001141969	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,TAPBP,PFDN6,ZBTB22,TAPBP,DAXX,TAPBP,DAXX	-5644,-567,-9202,-34003,-5851,-9202,-567,-9202,-567
chr6:33291053-33292381	chr6	+	33291360	33292322	True	NR_024517,NM_001350,NM_001145338,NM_172208,NM_001185181,NM_005453,NM_172209,NM_001141970,NM_003190,NM_001141969	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,-,+,-,-,-,-,-	DAXX,DAXX,ZBTB22,TAPBP,PFDN6,ZBTB22,TAPBP,DAXX,TAPBP,DAXX	-567,-567,-5641,-9196,-33999,-5848,-9196,-567,-9196,-567
chr6:33291053-33292381	chr6_dbb_hap3	+	4572687	4573648	False	NM_001145338,NM_001350,NM_172208,NM_001185181,NM_005453,NM_172209,NM_001141970,NM_003190,NM_001141969	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,TAPBP,PFDN6,ZBTB22,TAPBP,DAXX,TAPBP,DAXX	-5644,-567,-9200,-34000,-5851,-9200,-567,-9200,-567
chr2:132383766-132384982	chr2	+	132383837	132385024	True	NR_033885,NM_001085365	chr2,chr2	+,-	POTEKP,MZT2A	-34620,-133773
chr12:123320650-123320872	chr12	+	123320769	123320855	True	NM_003959,NM_024667	chr12,chr12	+,-	HIP1R,VPS37B	-781,59907
chr22:40442942-40443461	chr22	+	40443082	40443319	True	NM_001024843,NM_152512	chr22,chr22	+,-	TNRC6B,ENTHD1	-2313,-153288
chr22:50153635-50155324	chr22	+	50153896	50155076	True	NM_014838,NR_026993	chr22,chr22	+,-	ZBED4,LOC90834	92420,18932
chr10:119303705-119304078	chr10	+	119303904	119304116	True	NM_004098,NR_002791,NM_001165924	chr10,chr10,chr10	+,-,+	EMX2,EMX2OS,EMX2	-2004,513,-2004
chr8:7316662-7317356	chr8	+	7316831	7317304	True	NM_001040703,NM_016512,NM_058206,NM_058207,NM_058200,NM_058201,NM_058202,NM_058203	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	+,-,-,-,-,-,-,-	DEFB105B,SPAG11B,SPAG11B,SPAG11B,SPAG11B,SPAG11B,SPAG11B,SPAG11B	27938,3939,-6944,-6944,3939,3939,3939,3939
chr8:7316662-7317356	chr8	-	7709289	7709762	False	NM_152250,NM_001081552,NM_058203	chr8,chr8,chr8	-,+,+	DEFB105A,SPAG11A,SPAG11B	-27929,-3939,-3939
chr1:215259381-215259801	chr1	+	215259382	215259837	True	NM_001017425,NM_014217,NM_005401	chr1,chr1,chr1	+,+,-	KCNK2,KCNK2,PTPN14	-2881,-2881,-534358
chr5:102259991-102260732	chr5	+	102260210	102260724	True	NR_033440,NM_017676	chr5,chr5	+,-	PAM,GIN1	-58734,195168
chr3:75829012-75829360	chr4	-	49168329	49168484	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-180220,-259514
chr3:75829012-75829360	chr3	+	75829093	75829323	False	NR_036235,NM_001128223	chr3,chr3	+,-	MIR4273,ZNF717	-41714,4982
chr11:451520-451733	chr11	+	451554	451766	True	NM_030783,NM_001012302	chr11,chr11	+,-	PTDSS2,ANO9	-1325,-9543
chr17:43136530-43137747	chr17	+	43136756	43137611	True	NM_021079,NM_001128631,NM_024819	chr17,chr17,chr17	+,-,-	NMT1,DCAKD,DCAKD	1068,-7778,919
chr9:94703179-94703572	chr9	+	94703179	94703618	True	NR_015444,NM_004560	chr9,chr9	+,-	LOC100128076,ROR2	191497,8877
chr11:5535083-5535997	chr11	+	5535083	5535844	True	NM_001005163,NM_145053,NM_017481	chr11,chr11,chr11	+,-,-	OR52D1,UBQLNL,UBQLN3	-25220,2162,-3930
chr7:64766940-64767606	chr7	+	64767296	64767582	True	NM_001007253,NM_007139	chr7,chr7	-,+	ERV3,ZNF92	-300172,71185
chr7:100810025-100811101	chr7	+	100810300	100811004	True	NM_003378,NM_001283	chr7,chr7	-,+	VGF,AP1S1	-1448,-12665
chr2:88750975-88751353	chr2	+	88751004	88751204	True	NM_152670,NM_001135649	chr2,chr2	+,-	C2orf51,FOXI3	72964,899
chr9:139659180-139659575	chr9	+	139659234	139659598	True	NM_178469,NM_203347,NR_033913	chr9,chr9,chr9	-,-,+	LCN8,LCN15,LOC100128593	-6503,-269,-18672
chr19:38186853-38187553	chr19	+	38187050	38187600	True	NM_001172226,NM_152605	chr19,chr19	+,-	ZNF540,ZNF781	-101377,-3834
chr4:1714819-1715172	chr4	+	1714841	1715185	True	NM_006527,NM_138385,NM_006342,NM_001127266	chr4,chr4,chr4,chr4	-,-,+,-	SLBP,TMEM129,TACC3,TMEM129	-811,7949,8080,7949
chr5:157096664-157097753	chr5	+	157096909	157097769	True	NM_001145132,NM_178424	chr5,chr5	+,-	C5orf52,SOX30	791,-17481
chr19:12833296-12833531	chr19	+	12833416	12833570	True	NM_001136196,NM_001136195,NM_004317,NM_013433	chr19,chr19,chr19,chr19	-,-,+,-	TNPO2,TNPO2,ASNA1,TNPO2	2,1290,14735,-311
chr17:33777701-33778931	chr17	+	33777763	33778858	True	NM_144682,NR_003037	chr17,chr17	-,+	SLFN13,SNORD7	-1907,121817
chr19:51015917-51017282	chr19	+	51016005	51017309	True	NM_138334,NM_001024656,NM_001114598,NM_206538	chr19,chr19,chr19,chr19	-,-,-,+	JOSD2,ASPDH,ASPDH,C19orf63	-1660,688,-117,-36320
chr1:227918199-227918652	chr1	+	227918299	227918557	True	NR_024485,NR_024486,NM_053052,NM_001161465,NM_023007	chr1,chr1,chr1,chr1,chr1	+,+,+,-,-	LOC100130093,LOC100130093,SNAP47,JMJD4,JMJD4	-2110,-2110,4139,4605,4605
chr22:20862367-20863909	chr22	+	20862395	20863774	True	NM_001003891,NR_033825,NM_015889	chr22,chr22,chr22	+,-,+	MED15,KLHL22,MED15	-560,-12225,-560
chr9:34976262-34977180	chr9	+	34976293	34977063	True	NM_001135004,NM_007126	chr9,chr9	+,-	DNAJB5,VCP	12661,95734
chr4:6763903-6764484	chr4	+	6764007	6764305	True	NM_001100590,NM_203462	chr4,chr4	+,-	KIAA0232,MRFAP1L1	20153,-52401
chr3:33484354-33486026	chr3	+	33485014	33485903	True	NM_001171713,NM_014517,NM_001128161,NM_001128160	chr3,chr3,chr3,chr3	+,-,-,-	FBXL2,UBP1,UBP1,UBP1	-166136,-3144,-3117,-3144
chr8:68662108-68664042	chr8	+	68662668	68663986	True	NM_020361,NM_025170	chr8,chr8	-,+	CPA6,PREX2	-4048,200616
chr4:123536605-123538488	chr4	+	123536697	123538349	True	NM_001178007,NM_021803	chr4,chr4	+,-	BBS12,IL21	115507,3912
chr6:50682455-50682683	chr6	+	50682456	50682726	True	NM_172238,NM_001037498	chr6,chr6	+,-	TFAP2D,DEFB112	-1250,-666092
chr1:48350157-48350446	chr1	+	48350162	48350236	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	112376,338120
chr3:129244777-129245509	chr3	+	129245052	129245486	True	NM_000539,NM_015103	chr3,chr3	+,-	RHO,PLXND1	1995,80146
chr2:43052318-43054190	chr2	+	43053187	43053841	True	NM_020744,NM_012205	chr2,chr2	+,-	MTA3,HAAO	-257574,-33436
chr5:131394583-131394802	chr5	+	131394642	131394818	True	NM_000588,NM_001205250	chr5,chr5	+,-	IL3,ACSL6	1528,-46881
chr6:75956742-75957895	chr6	+	75956800	75957786	True	NR_029466,NM_001100409,NM_001865	chr6,chr6,chr6	-,+,-	COX7A2,SENP6,COX7A2	-3156,353835,-3156
chr15:72667314-72667637	chr15	+	72667315	72667384	True	NR_027262,NM_000520	chr15,chr15	+,-	C15orf34,HEXA	1069,1187
chr1:225640690-225642011	chr1	+	225641016	225641932	True	NM_194442,NM_001130440	chr1,chr1	-,+	LBR,SRP9	-24459,323582
chr16:84074855-84075211	chr16	+	84074869	84075257	True	NM_001080442,NM_019065	chr16,chr16	-,+	SLC38A8,NECAB2	555,-72683
chr17:40021734-40022220	chr17	+	40021833	40022023	True	NM_018143,NM_152467	chr17,chr17	-,+	KLHL11,KLHL10	-204,-27841
chr1:247263913-247264198	chr1	+	247263995	247264228	True	NM_024804,NM_001142572,NM_173858	chr1,chr1,chr1	-,-,+	ZNF669,ZNF669,VN1R5	3505,3505,155145
chr2:170654833-170655288	chr2	+	170654833	170655270	True	NM_003142,NM_014168	chr2,chr2	+,-	SSB,METTL5	118,26133
chr12:133567603-133567938	chr12	+	133567733	133567811	True	NM_019591,NM_001164715	chr12,chr12	+,-	ZNF26,ZNF605	-4735,-34841
chr17:19093439-19093763	chr17	+	19093439	19093607	True	NM_006613,NM_001102664	chr17,chr17	-,+	GRAP,EPN2	-143103,47082
chr17:19093439-19093763	chr17	-	19091279	19091355	False	NM_006613,NM_001102664	chr17,chr17	-,+	GRAP,EPN2	-140943,49334
chr15:39545096-39546721	chr15	+	39545097	39546178	True	NM_207445,NM_152597	chr15,chr15	+,-	C15orf54,FSIP1	-2263,528924
chr22:19464384-19466376	chr22	+	19465350	19466154	True	NM_005659,NM_001178010,NM_001178011,NM_001035247,NM_003504	chr22,chr22,chr22,chr22,chr22	-,+,+,-,+	UFD1L,CDC45,CDC45,UFD1L,CDC45	634,1259,1259,634,1261
chr11:2907928-2908833	chr11	+	2907952	2908882	True	NM_183233,NM_000076,NM_001122631,NM_001122630	chr11,chr11,chr11,chr11	+,-,-,-	SLC22A18,CDKN1C,CDKN1C,CDKN1C	12068,-957,-957,-957
chr6:44227875-44228159	chr6	+	44227896	44228206	True	NM_001137560,NM_004556,NM_178148	chr6,chr6,chr6	+,-,-	TMEM151B,NFKBIE,SLC35B2	10273,5369,-2613
chr22:27285290-27286204	chr22	+	27285469	27286016	True	NR_033321,NM_001887	chr22,chr22	+,-	MIAT,CRYBB1	-232074,-271478
chr12:26278149-26278624	chr12	+	26278155	26278577	True	NM_001135823,NM_030762	chr12,chr12	+,-	SSPN,BHLHE41	69691,-152
chr19:29372992-29374690	chr19	+	29373444	29374696	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	81341,329490
chr1:161996393-161997311	chr1	+	161996460	161997278	True	NM_001164757,NM_015441	chr1,chr1	+,-	NOS1AP,OLFML2B	42302,-2816
chr1:112075403-112076469	chr1	+	112075448	112076518	True	NM_174896,NM_000677	chr1,chr1	+,-	C1orf162,ADORA3	-58895,-28705
chr10:73611788-73612681	chr10	+	73611890	73612586	True	NM_001042466,NM_001042465,NM_002778,NM_001171936	chr10,chr10,chr10,chr10	-,-,-,+	PSAP,PSAP,PSAP,CDH23	-808,-808,-808,-40306
chr7:29877693-29879164	chr7	+	29877855	29879206	True	NM_001080529,NM_001145515	chr7,chr7	+,-	WIPF3,SCRN1	-3565,150269
chr11:66337109-66338828	chr11	+	66337717	66338433	True	NM_003793,NM_005125	chr11,chr11	-,+	CTSF,CCS	-1670,22256
chr17:74138394-74138808	chr17	+	74138448	74138754	True	NM_180990,NM_001454	chr17,chr17	+,-	ZACN,FOXJ1	-63237,-1068
chr14:61117212-61118364	chr14	+	61117248	61118404	True	NM_001177963,NM_005982	chr14,chr14	+,-	MNAT1,SIX1	83054,-1093
chrX:38422343-38422949	chrX	+	38422347	38422887	True	NM_001034853,NM_004615	chrX,chrX	-,+	RPGR,TSPAN7	-235559,-1667
chr9:95737601-95737820	chr9	+	95737717	95737873	True	NM_031486,NM_033086	chr9,chr9	-,+	ZNF484,FGD3	-97427,-1050
chr19:50170028-50170447	chr19	+	50170400	50170488	True	NM_001040668,NM_138639,NM_001571,NM_001197128,NM_001197127,NM_001197126,NM_001197125,NM_001197124,NM_001197123,NM_001197122	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,-,-,-,-,-,-,-,-	BCL2L12,BCL2L12,IRF3,IRF3,IRF3,IRF3,IRF3,IRF3,IRF3,IRF3	-2052,-2052,-1268,-1268,-1268,-1268,-1268,-1268,-1268,-1268
chr4:159686834-159687803	chr4	+	159687030	159687820	True	NM_005038,NM_020840	chr4,chr4	-,+	PPID,FNIP2	-42478,2361
chr6:149067608-149067819	chr6	+	149067644	149067840	True	NM_207360,NM_005715	chr6,chr6	-,+	ZC3H12D,UST	738358,430
chr21:44311506-44311787	chr21	+	44311542	44311774	True	NM_018669,NM_021075,NM_001001503	chr21,chr21,chr21	-,+,+	WDR4,NDUFV3,NDUFV3	-11864,1603,1603
chr12:96587665-96587889	chr12	+	96587671	96587871	True	NM_000895,NM_005230	chr12,chr12	-,+	LTA4H,ELK3	-158306,335
chr2:27631149-27631687	chr2	+	27631159	27631642	True	NM_177983,NM_013392	chr2,chr2	-,+	PPM1G,NRBP1	904,19830
chr2:60981224-60981934	chr2	+	60981911	60981977	True	NM_022894,NR_033980	chr2,chr2	+,-	PAPOLG,FLJ16341	1387,126522
chr17:30669674-30671647	chr17	+	30670544	30671160	True	NM_001098507,NM_001032293,NR_030362,NM_022344,NM_003457	chr17,chr17,chr17,chr17,chr17	+,+,+,-,+	ZNF207,ZNF207,MIR632,C17orf75,ZNF207	5996,5996,5967,-1355,5996
chr5:159731624-159731979	chr5	+	159731629	159731823	True	NM_001445,NM_024565	chr5,chr5	+,-	FABP6,CCNJL	-75243,7800
chr5:159435568-159436181	chr5	+	159435950	159436158	True	NM_003314,NM_052927	chr5,chr5	+,-	TTC1,PWWP2A	21,110344
chr8:107283808-107284046	chr8	+	107283827	107284040	True	NM_018002,NM_139166,NM_001198533	chr8,chr8,chr8	+,-,+	OXR1,ABRA,OXR1	-1472,498482,-1472
chrX:72218088-72220037	chrX	+	72218140	72220082	True	NR_026595,NM_001042506	chrX,chrX	-,+	NCRNA00246,PABPC1L2B	-54551,3269
chrX:72218088-72220037	chrX	-	72302618	72304560	False	NM_001042506,NM_001012977	chrX,chrX	+,-	PABPC1L2B,PABPC1L2A	-79317,-3267
chrX:153106250-153107735	chrX	+	153106541	153107750	True	NM_032512,NM_006280	chrX,chrX	-,+	PDZD4,SSR4	-10538,-46581
chr18:72201983-72202354	chr18	+	72202044	72202368	True	NR_024484,NM_032649	chr18,chr18	-,+	LOC400657,CNDP1	62753,-403
chr4:52878275-52880139	chr4	+	52878613	52879909	True	NM_145263,NM_001024611	chr4,chr4	+,-	SPATA18,LRRC66	37683,3927
chr16:1204268-1204496	chr16	+	1204333	1204534	True	NM_021098,NM_207419,NM_001005407	chr16,chr16,chr16	+,-,+	CACNA1H,C1QTNF8,CACNA1H	-1143,-58089,-1143
chr3:32990787-32991415	chr3	+	32990787	32991211	True	NM_001039770,NM_005508	chr3,chr3	-,+	TMPPE,CCR4	147132,1854
chr6:15052276-15053809	chr6	+	15052700	15053685	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	192841,609655
chr22:39490610-39490965	chr22	+	39490896	39491008	True	NM_001166004,NM_181773,NM_175709,NM_001166002,NM_001166003	chr22,chr22,chr22,chr22,chr22	+,+,-,+,+	APOBEC3H,APOBEC3H,CBX7,APOBEC3H,APOBEC3H	2220,2220,57580,2220,2220
chr20:43728860-43729514	chr20	+	43728894	43729372	True	NM_002251,NM_002638	chr20,chr20	-,+	KCNS1,PI3	431,74167
chr8:87127892-87128656	chr8	+	87127900	87128510	True	NM_152565,NM_033126	chr8,chr8	+,-	ATP6V0D2,PSKH2	-16825,-46049
chr6:39197798-39198237	chr6	+	39197797	39198285	True	NM_003740,NM_002062	chr6,chr6	-,+	KCNK5,GLP1R	-546,-181291
chr5:100239095-100240057	chr5	+	100239348	100240073	True	NM_005668,NM_175052,NM_198507	chr5,chr5,chr5	-,-,+	ST8SIA4,ST8SIA4,FAM174A	-361,-378,-368277
chr18:3452846-3453123	chr18	+	3452861	3453095	True	NM_019856,NM_173211,NM_173210,NM_003244,NM_170695,NM_173208,NM_173209,NM_173207	chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18	-,+,+,+,+,+,+,+	MYOM1,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1	-232755,676,-1322,-2741,-1322,-2882,-2940,-5305
chr3:111766793-111767881	chr3	+	111766796	111767919	True	NM_001042575,NR_026734,NM_001190259	chr3,chr3,chr3	+,+,-	TMPRSS7,TMPRSS7,GCET2	-8382,-8382,84283
chr17:4457932-4458182	chr17	+	4457938	4458202	True	NM_198501,NM_001122890,NM_014520,NM_153338,NM_001105538	chr17,chr17,chr17,chr17,chr17	+,-,-,-,-	SMTNL2,GGT6,MYBBP1A,GGT6,MYBBP1A	29073,5724,529,5724,529
chr6:31238801-31239215	chr6	+	31238894	31238980	True	NM_002117,NR_026791	chr6,chr6	-,+	HLA-C,HCG27	925,-73408
chr6:31238801-31239215	chr6_cox_hap2	+	2752149	2752235	False	NM_002117,NR_026791	chr6_cox_hap2,chr6_cox_hap2	-,+	HLA-C,HCG27	925,-71890
chr17:7819898-7820223	chr17	+	7819954	7820182	True	NR_003000,NR_024349	chr17,chr17	+,-	SCARNA21,LOC284023	-10564,-689
chr7:28449007-28449284	chr7	+	28449009	28449281	True	NM_182898,NM_175061	chr7,chr7	+,-	CREB5,JAZF1	2862,-228572
chr11:35515723-35515972	chr11	+	35515729	35515833	True	NM_014344,NM_001001991	chr11,chr11	+,-	FJX1,PAMR1	123901,31393
chr12:31081580-31083389	chr12	+	31081770	31083280	True	NM_032156,NM_001080509	chr12,chr12	-,+	CAPRIN2,TSPAN11	-174322,-1983
chr19:39934768-39934984	chr19	+	39934768	39934834	True	NM_001111020,NM_003169,NM_001130825,NM_001130824,NM_001020	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	SUPT5H,SUPT5H,SUPT5H,SUPT5H,RPS16	1351,1453,1351,1351,-8150
chr12:56709153-56709384	chr12	+	56709251	56709371	True	NM_014255,NM_001190991,NM_016584	chr12,chr12,chr12	-,-,+	CNPY2,CNPY2,IL23A	807,807,23291
chr5:140305599-140305890	chr5	+	140305644	140305846	True	NM_018898,NM_031882,NM_002109	chr5,chr5,chr5	+,+,-	PCDHAC1,PCDHAC1,HARS	455,455,-234673
chr1:205290724-205290935	chr1	+	205290852	205290924	True	NM_014858,NM_030952	chr1,chr1	+,-	TMCC2,NUAK2	-93865,9
chr16:68119953-68120278	chr16	+	68119966	68120240	True	NM_004555,NM_173165,NM_173163,NM_018380	chr16,chr16,chr16,chr16	+,+,+,-	NFATC3,NFATC3,NFATC3,DDX28	-748,-748,-748,-62196
chr22:35934950-35936166	chr22	+	35935129	35936043	True	NM_005368,NM_014310	chr22,chr22	-,+	MB,RASD2	77391,1308
chr14:57708705-57709168	chr14	+	57708878	57709132	True	NM_018229,NM_006544	chr14,chr14	+,-	MUDENG,EXOC5	26473,26535
chr6:108280331-108282080	chr6	+	108280437	108281892	True	NM_007214,NM_003269	chr6,chr6	-,+	SEC63,NR2E1	-955,205322
chr5:176511765-176512840	chr5	+	176512178	176512891	True	NM_213647,NM_022963,NM_001199298,NM_002011	chr5,chr5,chr5,chr5	+,+,-,+	FGFR4,FGFR4,UIMC1,FGFR4	1029,3659,-78383,1029
chr10:120786628-120787980	chr10	+	120786631	120787593	True	NR_002917,NM_199461	chr10,chr10	-,+	SNORA19,NANOS1	32108,1634
chr16:24856023-24856952	chr16	+	24856039	24856773	True	NM_001006634,NM_052944	chr16,chr16	-,+	ARHGAP17,SLC5A11	169956,778
chr2:131512940-131513398	chr2	+	131513241	131513401	True	NM_001105193,NM_001079530,NM_001105195,NM_152698,NM_001105194	chr2,chr2,chr2,chr2,chr2	+,-,+,+,+	FAM123C,CFC1B,FAM123C,FAM123C,FAM123C	-69,-155990,462,-216,462
chr6:136222778-136223205	chr6	+	136222810	136223234	True	NM_001099286,NM_018945	chr6,chr6	-,+	FAM54A,PDE7B	348265,-50040
chr6:130534147-130535709	chr6	+	130534486	130535654	True	NM_032438,NM_001017373,NM_152552	chr6,chr6,chr6	+,-,-	L3MBTL3,SAMD3,SAMD3	-194809,8495,890
chrX:128656376-128656864	chrX	+	128656442	128656766	True	NM_003069,NM_000276,NM_139035	chrX,chrX,chrX	-,+,-	SMARCA1,OCRL,SMARCA1	744,17485,744
chr18:53231795-53233299	chr18	+	53231794	53232909	True	NM_001083962,NM_004163	chr18,chr18	-,+	TCF4,RAB27B	23008,-736006
chr3:49894008-49894435	chr3	+	49894019	49894417	True	NM_005879,NM_203370	chr3,chr3	-,+	TRAIP,C3orf54	-27,-53383
chr16:66835678-66835911	chr16	+	66835728	66835958	True	NM_005182,NM_001136505	chr16,chr16	+,-	CA7,CCDC79	42323,-205
chr5:54472282-54472690	chr5	+	54472407	54472739	True	NR_031572,NR_030387,NR_029960,NM_001145734,NM_152623,NM_001170402,NM_001008397	chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,-,-,+	MIR449C,MIR449B,MIR449A,CDC20B,CDC20B,CDC20B,GPX8	-4226,-5837,-5957,-3402,-3402,-3402,-16474
chr1:114423170-114424421	chr1	+	114423389	114424460	True	NR_037864,NM_001010922,NM_015967,NM_001193431,NM_012411,NM_022836	chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,-,-,+	LOC100287722,BCL2L15,PTPN22,PTPN22,PTPN22,DCLRE1B	-24185,5759,-9014,-9014,-9014,23454
chr7:34716410-34716760	chr7	+	34716421	34716809	True	NR_033664,NM_207173	chr7,chr7	-,+	AAA1,NPSR1	81125,-18582
chr22:46061908-46063213	chr22	+	46061933	46062852	True	NM_001167621,NM_148674,NM_013236	chr22,chr22,chr22	+,-,+	ATXN10,SMC1B,ATXN10	4825,-252433,4825
chr16:23767065-23767287	chr16	+	23767103	23767189	True	NM_033266,NM_022097	chr16,chr16	-,+	ERN2,CHP2	-42282,-1206
chrX:89177634-89178795	chrY	+	3447985	3448607	False	NM_003140,NM_139214	chrY,chrY	-,+	SRY,TGIF2LY	-792193,-917
chrX:89177634-89178795	chrX	+	89177785	89178839	True	NM_138960,NM_004538	chrX,chrX	+,-	TGIF2LX,NAP1L3	-903,3749898
chr11:9007339-9008918	chr11	+	9007363	9008772	True	NM_182901,NM_020645	chr11,chr11	+,-	C11orf17,NRIP3	-74612,16881
chr11:118754639-118755766	chr11	+	118754647	118755751	True	NM_001716,NM_182557,NM_032966	chr11,chr11,chr11	+,-,+	CXCR5,BCL9L,CXCR5	-157,25912,8349
chr2:96699243-96700208	chr2	+	96699276	96700150	True	NM_207328,NR_003698	chr2,chr2	-,+	GPAT2,LOC729234	627,-23028
chr2:96699243-96700208	chr2	-	96455926	96456798	False	NM_207328,NM_138800	chr2,chr2	-,+	GPAT2,TRIM43	243979,-198211
chr21:42881015-42881788	chr21	+	42881038	42881651	True	NM_001178046,NM_001135099,NM_005656	chr21,chr21,chr21	+,-,-	MX1,TMPRSS2,TMPRSS2	-82986,-1046,-953
chr9:69376929-69378815	chr9	+	69377775	69378608	True	NM_001085457,NM_001098805	chr9,chr9	-,+	CBWD6,ANKRD20A4	-115182,3372
chr9:69376929-69378815	chr9	+	42364151	42364201	False	NR_003670,NM_001012419,NM_001012421	chr9,chr9,chr9	-,+,+	KGFLP2,ANKRD20A3,ANKRD20A2	-344567,4101,4101
chr9:69376929-69378815	chr9	-	43137209	43137761	False	NM_001012419,NR_026558,NR_027472,NM_001012421	chr9,chr9,chr9,chr9	-,+,-,-	ANKRD20A3,AQP7P3,LOC642929,ANKRD20A2	-3665,-279108,7773,-3665
chr11:4714064-4714805	chr11	+	4714179	4714673	True	NM_030774,NM_152430	chr11,chr11	-,+	OR51E2,OR51E1	4453,-49086
chr7:149539754-149540285	chr7	+	149539763	149540336	True	NM_001099220,NR_027040	chr7,chr7	+,-	ZNF862,LOC401431	-4305,30674
chr14:42075659-42075900	chr14	+	42075668	42075780	True	NM_152447,NM_203301	chr14,chr14	+,-	LRFN5,FBXO33	983,-2173964
chr19:51071819-51072310	chr19	+	51072297	51072359	True	NR_004384,NM_001080457	chr19,chr19	+,-	SNAR-F,LRRC4B	35860,-995
chr17:54670557-54670779	chr17	+	54670692	54670810	True	NM_001085430,NM_005450	chr17,chr17	-,+	C17orf67,NOG	222490,249
chr11:65834155-65835626	chr11	+	65834188	65835542	True	NM_033036,NM_018026	chr11,chr11	-,+	GAL3ST3,PACS1	-17537,2281
chr11:1606114-1606399	chr11	+	1606288	1606384	True	NM_001005922,NR_021489	chr11,chr11	-,+	KRTAP5-1,LOC338651	179,-12368
chr17:37824927-37825425	chr17	+	37824975	37825295	True	NM_002686,NM_003673,NM_033419	chr17,chr17,chr17	+,+,-	PNMT,TCAP,PGAP3	-519,-3427,19065
chr11:121162983-121163413	chr11	+	121163081	121163428	True	NR_029671,NM_001024956,NM_006918	chr11,chr11,chr11	-,+,+	MIR125B1,SC5DL,SC5DL	807174,148,-41
chr9:3525573-3526020	chr9	+	3525716	3525926	True	NM_134428,NM_002919,NR_026663	chr9,chr9,chr9	-,-,+	RFX3,RFX3,C9orf70	107,107,372719
chrX:109529670-109529980	chrX	+	109529914	109530025	True	NM_020769,NM_001025580	chrX,chrX	+,-	RGAG1,AMMECR1	132259,31410
chr11:33097913-33099498	chr11	+	33097963	33099252	True	NR_015451,NM_001326	chr11,chr11	+,-	NCRNA00294,CSTF3	-319,83835
chr7:56673284-56673493	chr7	+	56673284	56673344	True	NR_029420,NR_026929	chr7,chr7	-,+	LOC650226,DKFZp434L192	-157216,-109419
chr2:71693287-71693518	chr2	+	71693435	71693545	True	NM_001130982,NM_001130983,NM_001130986,NM_001130455,NM_001130984,NM_001130985,NM_020459,NM_001130987	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,+,+,-,+	DYSF,DYSF,DYSF,DYSF,DYSF,DYSF,PAIP2B,DYSF	286,286,286,286,286,286,-239202,286
chr2:85831014-85832024	chr2	+	85831203	85832067	True	NR_033179,NM_016494,NM_001013649,NM_001031738	chr2,chr2,chr2,chr2	-,+,-,-	TMEM150A,RNF181,C2orf68,TMEM150A	-1381,-8424,7162,-1381
chr21:19251664-19252482	chr21	+	19252100	19252510	True	NM_001204175,NR_024354	chr21,chr21	+,-	CHODL,NCRNA00157	37146,5465
chr5:10354363-10354869	chr5	+	10354396	10354795	True	NM_005885,NM_138809	chr5,chr5	+,-	MARCH6,CMBL	-619,-46228
chr1:145888451-145888915	chr1	+	145888651	145888727	True	NR_003377,NM_001097616	chr1,chr1	-,+	PDZK1P1,GPR89C	53950,-4847
chr1:145888451-145888915	chr1	+	147430350	147430426	False	NR_003377,NM_001097616	chr1,chr1	-,+	PDZK1P1,GPR89C	53963,-4847
chr1:6051885-6052154	chr1	+	6051891	6052069	True	NM_001199861,NM_015102	chr1,chr1	+,-	KCNAB2,NPHP4	288,514
chr9:15524357-15525017	chr9	+	15524426	15525042	True	NM_173550,NM_033222	chr9,chr9	+,-	C9orf93,PSIP1	28054,-13423
chr22:25167955-25168818	chr22	+	25167966	25168757	True	NM_001008496,NR_001283	chr22,chr22	-,+	PIWIL3,TOP1P2	1977,-7551
chr2:233350857-233351091	chr2	+	233350869	233350993	True	NM_001631,NM_004826	chr2,chr2	+,-	ALPI,ECEL1	-30087,1589
chr12:64845522-64845848	chr12	+	64845548	64845828	True	NM_001170633,NM_013254	chr12,chr12	-,+	C12orf56,TBK1	-61203,11
chr2:85662283-85662636	chr2	+	85662320	85662618	True	NM_001747,NM_198482	chr2,chr2	-,+	CAPG,SH2D6	-24644,-453
chr4:74125095-74125420	chr4	+	74125150	74125458	True	NM_032217,NM_000477,NM_198889	chr4,chr4,chr4	-,+,-	ANKRD17,ALB,ANKRD17	-648,144513,-648
chr8:28245859-28247564	chr8	+	28245968	28247553	True	NM_018660,NM_006228	chr8,chr8	-,+	ZNF395,PNOC	-1991,-71381
chr5:157874874-157875651	chr5	+	157875029	157875693	True	NM_014666,NM_173491	chr5,chr5	-,+	CLINT1,LSM11	-588846,-704325
chr15:23084866-23085440	chr15	+	23084925	23085439	True	NM_001142275,NM_144599,NM_001033028	chr15,chr15,chr15	-,-,+	NIPA1,NIPA1,CYFIP1	1454,1047,-129221
chr11:113743131-113744785	chr11	+	113743382	113744540	True	NM_006028,NM_020886	chr11,chr11	+,-	HTR3B,USP28	31048,1766
chr16:58664013-58664819	chr16	+	58664173	58664665	True	NM_016284,NM_206999,NM_024860	chr16,chr16,chr16	-,-,+	CNOT1,CNOT1,SETD6	-423,-423,-114841
chr16:57391280-57391792	chr16	+	57391435	57391704	True	NM_015993,NM_002990	chr16,chr16	-,+	PLLP,CCL22	-72851,990
chr21:45582508-45582914	chr21	+	45582571	45582911	True	NM_198155,NM_015259	chr21,chr21	+,-	C21orf33,ICOSLG	-29128,77973
chr2:16083643-16084345	chr2	+	16083796	16084348	True	NR_026766,NM_005378	chr2,chr2	-,+	MYCNOS,MYCN	-1951,-3164
chr17:43302425-43302731	chr17	+	43302482	43302570	True	NM_152343,NM_005892	chr17,chr17	-,+	C17orf46,FMNL1	36959,-3241
chr9:127181435-127181814	chr9	+	127181446	127181506	True	NM_002799,NM_001161808	chr9,chr9	-,+	PSMB7,GPR144	-3725,31916
chr19:2327214-2327694	chr19	+	2327213	2327669	True	NM_152988,NM_001077238,NM_016199	chr19,chr19,chr19	+,+,-	SPPL2B,SPPL2B,LSM7	959,959,995
chr12:8785842-8786312	chr12	+	8785906	8786228	True	NM_020661,NM_020734	chr12,chr12	-,+	AICDA,RIMKLB	-20464,64289
chr5:761437-761723	chr5	+	761538	761764	True	NM_001166260,NM_007030	chr5,chr5	+,-	TRIP13,TPPP	131204,-68028
chr12:52943047-52944238	chr12	+	52943130	52944270	True	NM_033448,NM_002284	chr12,chr12	-,+	KRT71,KRT86	2711,-247532
chr16:20805297-20806989	chr16	+	20805387	20807029	True	NM_080663,NM_001144924	chr16,chr16	-,+	ERI2,LOC81691	10816,10737
chr15:28774194-28775096	chr15	+	28774585	28774777	True	NR_036443,NR_033351,NR_033353	chr15,chr15,chr15	+,-,-	HERC2P9,GOLGA8F,GOLGA8G	124810,3416,3416
chr15:28774194-28775096	chr15	-	28627149	28627341	False	NM_004667,NR_033351,NR_033353	chr15,chr15,chr15	-,+,+	HERC2,GOLGA8F,GOLGA8G	-59854,-3416,-3416
chr15:28774194-28775096	chr15	-	20771172	20771232	False	NM_001145004,NR_027411	chr15,chr15	-,+	GOLGA6L6,GOLGA8C	-24058,-3553
chr15:28774194-28775096	chr15	+	22712167	22712227	False	NR_027407,NM_001001413	chr15,chr15	-,+	GOLGA8DP,GOLGA6L1	3555,24018
chr15:28774194-28775096	chr15	-	23438570	23438630	False	NR_002824,NR_033350	chr15,chr15	-,+	HERC2P2,GOLGA8E	-60311,-3555
chr22:25348961-25349300	chr22	+	25348982	25349244	True	NM_001145206,NM_001001663	chr22,chr22	+,-	KIAA1671,TMEM211	74696,-13668
chr19:632317-632534	chr19	+	632396	632524	True	NM_005035,NM_020637	chr19,chr19	-,+	POLRMT,FGF22	1094,7401
chr7:72934393-72935611	chr7	+	72934563	72935386	True	NM_003508,NM_032408	chr7,chr7	+,-	FZD9,BAZ1B	-86505,1292
chr7:45146898-45147269	chr7	+	45146936	45147285	True	NM_030900,NM_199122,NR_002990,NR_002919,NR_002991,NM_004749,NM_005856	chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,-,+	TBRG4,TBRG4,SNORA5B,SNORA5A,SNORA5C,TBRG4,RAMP3	4083,4083,-1238,-2855,-2295,4083,50081
chr10:79794731-79795287	chr10	+	79794857	79795226	True	NM_001026,NM_007055,NM_001142282,NM_001142283,NM_001142284,NM_033022,NM_001142285	chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,-,+,+,+,+,+	RPS24,POLR3A,RPS24,RPS24,RPS24,RPS24,RPS24	-1400,-5559,-1400,-1400,-1400,-1400,-1400
chr20:3827269-3827508	chr20	+	3827314	3827374	True	NM_001810,NM_020746,NR_037922,NR_037921	chr20,chr20,chr20,chr20	-,+,+,+	CENPB,MAVS,MAVS,MAVS	-59977,71,71,71
chr12:49392806-49393025	chr12	+	49392923	49392995	True	NM_015086,NM_005430	chr12,chr12	-,+	DDN,WNT1	143,-20738
chr20:35091028-35091299	chr20	+	35091183	35091347	True	NM_183006,NM_032214,NM_001042486	chr20,chr20,chr20	+,-,+	DLGAP4,SLA2,DLGAP4	-1092,183261,-1392
chr17:27399021-27400827	chr17	+	27399044	27400852	True	NM_016518,NM_004740	chr17,chr17	+,-	PIPOX,TIAF1	-29177,1825
chr10:71209048-71210108	chr10	+	71209059	71209908	True	NM_001057,NM_012339	chr10,chr10	-,+	TACR2,TSPAN15	-32385,1317
chr20:31988010-31988475	chr20	+	31988063	31988465	True	NM_016408,NM_001032999,NM_016082	chr20,chr20,chr20	-,+,-	CDK5RAP1,CBFA2T2,CDK5RAP1	930,89462,930
chr11:11881787-11882936	chr11	+	11881839	11882630	True	NM_017944,NM_001018057	chr11,chr11	+,-	USP47,DKK3	-18929,147615
chr17:75142327-75143113	chr17	+	75142369	75143149	True	NR_036200,NM_001039573,NM_003003,NM_001143999,NM_001143998	chr17,chr17,chr17,chr17,chr17	-,+,+,+,+	MIR4316,SEC14L1,SEC14L1,SEC14L1,SEC14L1	250037,-5422,-5422,-5422,-5422
chr6:15080990-15081574	chr6	+	15081224	15081411	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	165115,581935
chr1:114354105-114354308	chr1	+	114354121	114354295	True	NR_037864,NM_018364	chr1,chr1	+,-	LOC100287722,RSBN1	44961,825
chr17:72920166-72920408	chr17	+	72920199	72920375	True	NM_173477,NM_178160	chr17,chr17	-,+	USH1G,OTOP2	-848,-6
chr19:707141-707857	chr19	+	707232	707760	True	NM_214710,NM_002579,NM_001040134	chr19,chr19,chr19	-,+,+	PRSS57,PALM,PALM	-11771,1192,1192
chr11:44330956-44331212	chr11	+	44330978	44331166	True	NM_021926,NM_000401	chr11,chr11	-,+	ALX4,EXT2	600,-213282
chrX:51574246-51575218	chrX	+	51574246	51574948	True	NM_001005332,NR_033773	chrX,chrX	+,-	MAGED1,LOC441495	-28150,-148799
chr1:26520212-26521497	chr1	+	26520264	26521154	True	NM_198137,NM_001077262	chr1,chr1	+,-	CATSPER4,UBXN11	-3200,112091
chr9:140084074-140084542	chr9	+	140084199	140084481	True	NM_003731,NM_013366	chr9,chr9	+,-	SSNA1,ANAPC2	-1196,-1142
chr10:27793761-27794579	chr10	+	27793809	27794230	True	NM_021252,NM_001034842	chr10,chr10	+,-	RAB18,PTCHD3	-611,-90512
chr1:155908203-155909059	chr1	+	155908208	155908600	True	NM_014949,NM_181885	chr1,chr1	-,+	KIAA0907,RXFP4	-4020,2879
chr1:55198614-55199015	chr1	+	55198970	55199034	True	NM_004623,NM_152268	chr1,chr1	+,-	TTC4,PARS2	-17526,31242
chr20:18446488-18447107	chr20	+	18446487	18447159	True	NR_036160,NM_006466,NM_001099407	chr20,chr20,chr20	+,+,-	MIR3192,POLR3F,C20orf12	4099,873,728
chr9:35618228-35619063	chr9	+	35618258	35619090	True	NM_001782,NM_006285	chr9,chr9	-,+	CD72,TESK1	-4,-13028
chr4:47051301-47053233	chr4	+	47051397	47053259	True	NM_000809,NM_000812	chr4,chr4	-,+	GABRA4,GABRB1	-54973,-18154
chr5:175222661-175223743	chr5	+	175222832	175223310	True	NM_032361,NM_006650	chr5,chr5	-,+	THOC3,CPLX2	172285,299
chr17:25620398-25620948	chr17	+	25620418	25620941	True	NM_015626,NM_000625,NM_134265	chr17,chr17,chr17	+,-,+	WSB1,NOS2,WSB1	164,506665,164
chr13:114461426-114461834	chr13	+	114461439	114461785	True	NM_182614,NR_028064	chr13,chr13	+,-	FAM70B,LOC100130386	430,-7377
chr6:111245028-111246161	chr6	+	111245124	111245924	True	NM_138408,NM_015076	chr6,chr6	+,-	GTF3C6,CDK19	33838,-108712
chr20:3829039-3829722	chr20	+	3829039	3829761	True	NM_001810,NM_020746,NR_037922,NR_037921	chr20,chr20,chr20,chr20	-,+,+,+	CENPB,MAVS,MAVS,MAVS	-61702,-1646,-1646,-1646
chr17:5094446-5094849	chr17	+	5094485	5094799	True	NM_032530,NR_034082	chr17,chr17	-,+	ZNF594,LOC100130950	429,579
chr2:232653392-232654336	chr2	+	232653416	232654314	True	NM_022730,NM_002601	chr2,chr2	+,-	COPS7B,PDE6D	-2305,-7442
chr10:13043885-13044545	chr10	+	13043952	13044360	True	NM_031455,NM_001008211	chr10,chr10	-,+	CCDC3,OPTN	-248,97721
chr13:39550462-39551882	chr13	+	39550473	39551773	True	NM_001012754,NM_001144033	chr13,chr13	+,-	NHLRC3,STOML3	60681,13286
chr1:15929003-15929418	chr1	+	15929023	15929193	True	NM_032341,NM_024758	chr1,chr1	+,-	DDI2,AGMAT	14759,-17418
chr11:126079519-126081234	chr11	+	126079626	126081141	True	NM_001144827,NM_032795,NM_024556	chr11,chr11,chr11	-,-,+	RPUSD4,RPUSD4,FAM118B	496,496,477
chr17:4630791-4632248	chr17	+	4631001	4631817	True	NM_001001683,NM_022059	chr17,chr17	+,-	MED11,CXCL16	2905,11463
chr1:153700636-153701091	chr1	+	153700758	153701130	True	NM_023015,NM_004515	chr1,chr1	+,-	INTS3,ILF2	-242,-57279
chr4:102723259-102724874	chr4	+	102723339	102724469	True	NM_001083907,NM_001130692	chr4,chr4	+,-	BANK1,PPP3CA	10513,-454711
chr3:120168257-120168750	chr3	+	120168277	120168753	True	NM_001168331,NM_007085	chr3,chr3	+,-	NDUFB4,FSTL1	146374,1215
chr1:110168579-110168902	chr1	+	110168581	110168859	True	NM_139156,NM_005272,NM_203404,NM_004037	chr1,chr1,chr1,chr1	+,-,+,+	AMPD2,GNAT2,AMPD2,AMPD2	-6173,-12876,-583,-5356
chr19:7588403-7588855	chr19	+	7588420	7588714	True	NM_018083,NM_080662,NM_020533	chr19,chr19,chr19	+,-,+	ZNF358,PEX11G,MCOLN1	-7467,-34515,-975
chr1:157043098-157043402	chr1	+	157043101	157043163	True	NM_001004341,NR_001560	chr1,chr1	-,+	ETV3L,CYCSP52	26487,54990
chr11:101977616-101977880	chr11	+	101977733	101977803	True	NM_001195045,NM_001195044,NM_001130145,NM_006106,NM_178127	chr11,chr11,chr11,chr11,chr11	+,+,+,+,-	YAP1,YAP1,YAP1,YAP1,ANGPTL5	5367,3388,3388,3388,-190480
chr7:44058437-44058645	chr7	+	44058480	44058694	True	NM_175064,NR_003655	chr7,chr7	+,-	SPDYE1,POLR2J4	-18042,104
chr7:44058437-44058645	chr7	+	102119221	102119289	False	NM_006234,NM_152892	chr7,chr7	-,+	POLR2J,LRWD1	142,-13882
chr19:11483018-11483591	chr19	+	11483184	11483329	True	NM_000121,NM_175871	chr19,chr19	-,+	EPOR,C19orf39	11740,2053
chr19:42830811-42831581	chr19	+	42830818	42831540	True	NM_001145940,NM_001410	chr19,chr19	-,+	PAFAH1B3,MEGF8	-23866,-1115
chr7:1098117-1098603	chr7	+	1098171	1098604	True	NM_138445,NR_029898	chr7,chr7	+,-	GPR146,MIR339	-1081,-35509
chr17:7383893-7385608	chr17	+	7384139	7385648	True	NM_000937,NM_020899,NM_001128833,NM_001102614	chr17,chr17,chr17,chr17	+,-,-,+	POLR2A,ZBTB4,ZBTB4,AMAC1L3	2049,1970,-1195,-253
chr10:17271644-17271894	chr10	+	17271658	17271928	True	NM_003380,NM_004412	chr10,chr10	+,-	VIM,TRDMT1	-1451,-27588
chr16:50321513-50322682	chr16	+	50321665	50322728	True	NM_001114,NM_001173984	chr16,chr16	+,-	ADCY7,BRD7	-5,80167
chr15:64451758-64453454	chr15	+	64451935	64452783	True	NM_024798,NM_000942	chr15,chr15	+,-	SNX22,PPIB	-8070,2621
chr1:40041500-40041705	chr1	+	40041525	40041585	True	NM_001135653,NM_003819,NM_001135654,NR_002983,NM_181809	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	PABPC4,PABPC4,PABPC4,SNORA55,BMP8A	986,986,986,-8343,-84258
chr17:39942937-39943159	chr17	+	39942945	39943155	True	NM_002230,NM_021991,NM_021939	chr17,chr17,chr17	-,-,+	JUP,JUP,FKBP10	9,9,25806
chr1:156399785-156400485	chr1	+	156399784	156400498	True	NM_006365,NR_026549,NR_029691	chr1,chr1,chr1	-,+,-	C1orf61,RHBG,MIR9-1	-600,-60833,-9563
chr17:28300543-28302368	chr17	+	28300852	28302218	True	NM_198529,NM_033389	chr17,chr17	+,-	EFCAB5,SSH2	-32285,-43834
chr9:115876149-115876651	chr9	+	115876462	115876580	True	NR_024376,NR_024366	chr9,chr9	-,+	NCRNA00256B,NCRNA00256A	-2505,-1350
chr9:115876149-115876651	chr9	-	115872552	115872670	False	NR_024376,NR_024366	chr9,chr9	-,+	NCRNA00256B,NCRNA00256A	1350,2505
chr9:99415431-99416213	chr9	+	99415571	99415953	True	NR_026792,NM_153698	chr9,chr9	+,-	LOC441455,C9orf21	72149,1712
chr5:159616407-159617330	chr5	+	159616741	159617243	True	NM_001130958,NM_001040442,NM_001130864	chr5,chr5,chr5	+,+,-	FABP6,FABP6,PWWP2A	-2432,8804,-70289
chr19:13057077-13057733	chr19	+	13057206	13057615	True	NM_005053,NM_004343,NM_052850	chr19,chr19,chr19	+,+,-	RAD23A,CALR,GADD45GIP1	-615,-7855,10486
chr3:6903992-6904245	chr3	+	6904074	6904294	True	NM_000844,NR_033378,NM_181874	chr3,chr3,chr3	+,-,+	GRM7,LOC100288428,GRM7	-1323,1639100,-1323
chr1:55106982-55107289	chr1	+	55107033	55107303	True	NR_026782,NR_037639,NM_001039464,NR_037640,NR_037641,NM_176782	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-	HEATR8,HEATR8-TTC4,HEATR8,HEATR8-TTC4,HEATR8-TTC4,FAM151A	123,123,123,123,123,-17833
chr1:31771390-31773352	chr1	+	31771664	31773388	True	NM_004814,NM_016505	chr1,chr1	-,+	SNRNP40,ZCCHC17	-2020,-1874
chr7:6899020-6899343	chr7	+	6899109	6899391	True	NM_198097,NM_173565	chr7,chr7	-,+	C7orf28B,RSPH10B	-33183,-105420
chr3:52347938-52348843	chr3	+	52348137	52348825	True	NM_015512,NR_029677	chr3,chr3	+,-	DNAH1,MIR135A1	1509,-19813
chr10:75899587-75899920	chr10	+	75899686	75899906	True	NM_001202450,NM_012095	chr10,chr10	+,-	ADK,AP3M1	11036,10970
chrX:20007468-20008654	chrX	+	20007593	20008541	True	NR_024440,NM_001173456	chrX,chrX	-,+	LOC729609,PDHA1	48,-645642
chr4:185719762-185721650	chr4	+	185719892	185721679	True	NR_003542,NM_152683	chr4,chr4	-,+	SLED1,CCDC111	116,-149176
chr1:1677443-1677693	chr1	+	1677476	1677713	True	NM_182838,NM_001199787,NR_002946	chr1,chr1,chr1	-,-,+	SLC35E2,SLC35E2,MMP23A	-38,-38,-46149
chr7:120590884-120591122	chr7	+	120590923	120591129	True	NM_198267,NM_019071,NM_012338	chr7,chr7,chr7	+,+,-	ING3,ING3,TSPAN12	-157,-157,-92746
chr7:75442102-75444022	chr7	+	75442453	75444057	True	NM_002991,NM_001040456	chr7,chr7	-,+	CCL24,RHBDD2	108,64259
chr2:99921891-99922509	chr2	+	99922129	99922258	True	NM_174898,NM_015904	chr2,chr2	-,+	LYG1,EIF5B	-4490,31575
chr20:5930697-5931004	chr20	+	5930715	5930996	True	NM_182802,NM_032485,NM_015939	chr20,chr20,chr20	+,+,-	MCM8,MCM8,TRMT6	301,301,227
chr21:34444448-34444810	chr21	+	34444482	34444599	True	NR_024102,NM_138983	chr21,chr21	-,+	C21orf54,OLIG1	97995,-2083
chr15:78219437-78219847	chr15	+	78219554	78219761	True	NM_001101404,NR_027024	chr15,chr15	+,-	SH2D7,LOC645752	165165,-366
chr2:218808868-218809736	chr2	+	218809210	218809776	True	NR_034176,NM_022648	chr2,chr2	+,-	RUFY4,TNS1	89880,-414
chr1:40033141-40033649	chr1	+	40033213	40033585	True	NR_003929,NM_181809,NM_003819,NR_002983,NM_001135653,NM_001135654	chr1,chr1,chr1,chr1,chr1,chr1	-,+,-,-,-,-	PPIEL,BMP8A,PABPC4,SNORA55,PABPC4,PABPC4	-7843,-75953,8992,-31,8992,8992
chr12:48862094-48862672	chr12	+	48862107	48862273	True	NM_012404,NM_002289	chr12,chr12	+,-	ANP32D,LALBA	4174,101616
chr11:117186113-117186343	chr11	+	117186201	117186379	True	NM_014956,NM_138973,NM_012104,NM_138971,NM_138972	chr11,chr11,chr11,chr11,chr11	+,-,-,-,-	CEP164,BACE1,BACE1,BACE1,BACE1	12191,643,643,643,643
chr20:37353244-37353653	chr20	+	37353376	37353640	True	NM_080552,NR_027241	chr20,chr20	+,-	SLC32A1,LOC388796	-322,-289358
chr19:53726368-53727916	chr19	+	53726939	53727921	True	NM_182609,NM_024733,NM_173856	chr19,chr19,chr19	-,-,+	ZNF677,ZNF665,VN1R2	30240,-30320,33623
chr2:228190498-228190757	chr2	+	228190531	228190801	True	NM_020194,NM_024795	chr2,chr2	+,-	MFF,TM4SF20	1426,53271
chr10:12393183-12393591	chr10	+	12393218	12393561	True	NM_014142,NM_153498,NM_020397	chr10,chr10,chr10	-,+,+	NUDT5,CAMK1D,CAMK1D	-155075,-1686,-1686
chrX:102884674-102884913	chrX	+	102884729	102884913	True	NM_004780,NM_001142418,NM_001006640,NM_001006639	chrX,chrX,chrX,chrX	+,-,+,+	TCEAL1,MORF4L2,TCEAL1,TCEAL1	-888,56883,-1132,-888
chr1:44482972-44483237	chr1	+	44482995	44483267	True	NM_152499,NM_006934,NM_201649	chr1,chr1,chr1	+,-,-	CCDC24,SLC6A9,SLC6A9	-25766,2,2
chr19:51611927-51612406	chr19	+	51611928	51612360	True	NM_145232,NM_014441	chr19,chr19	-,+	CTU1,SIGLEC9	-281,15776
chrY:1469962-1470170	chrY	+	1469991	1470207	True	NM_001636,NR_026710,NR_026711	chrY,chrY,chrY	-,+,+	SLC25A6,ASMTL-AS1,ASMTL-AS1	-8952,-618,-618
chrY:1469962-1470170	chrX	+	1519991	1520207	False	NM_001636,NR_026710,NR_026711	chrX,chrX,chrX	-,+,+	SLC25A6,ASMTL-AS1,ASMTL-AS1	-8952,-618,-618
chr7:124111917-124112423	chr7	+	124111922	124112434	True	NM_005302,NM_001174046	chr7,chr7	-,+	GPR37,SPAM1	293297,-546064
chr2:210635783-210636186	chr2	+	210635783	210636150	True	NM_152519,NM_032504,NM_182587	chr2,chr2,chr2	-,+,+	C2orf67,UNC80,UNC80	399951,566,566
chr1:211663791-211664147	chr1	+	211663949	211664079	True	NM_183059,NM_001164688,NR_026761	chr1,chr1,chr1	-,-,+	RD3,RD3,C1orf97	2230,2230,-107904
chr17:41836561-41837244	chr17	+	41836668	41837158	True	NM_025237,NM_001136483	chr17,chr17	-,+	SOST,C17orf105	-512,20644
chr1:85359098-85359910	chr1	+	85359136	85359906	True	NM_145172,NM_012152	chr1,chr1	+,-	WDR63,LPAR3	168086,-240
chr2:170216503-170217729	chr2	+	170216677	170217627	True	NM_152384,NM_004525	chr2,chr2	+,-	BBS5,LRP2	118378,1545
chr11:68780982-68781200	chr11	+	68780981	68781189	True	NM_139075,NM_001098515,NM_145015	chr11,chr11,chr11	+,-,-	TPCN2,MRGPRF,MRGPRF	35160,-131,-131
chr7:75039108-75039501	chr7	+	75039311	75039467	True	NR_003614,NR_033322	chr7,chr7	-,+	PMS2L2,NSUN5P1	-51096,156
chr7:75039108-75039501	chr7	-	72425439	72425595	False	NR_033323,NR_003602	chr7,chr7	-,+	NSUN5P2,LOC541473	-137,14596
chr11:92106119-92107096	chr11	+	92106157	92107081	True	NM_152313,NM_001008781	chr11,chr11	-,+	SLC36A4,FAT3	824064,-20959
chr16:23723378-23723775	chr16	+	23723537	23723814	True	NM_005030,NM_033266	chr16,chr16	+,-	PLK1,ERN2	-33387,1057
chrX:148677571-148678227	chrX	+	148677575	148678251	True	NM_016153,NM_005365,NM_001164415,NM_001171909,NM_001080790	chrX,chrX,chrX,chrX,chrX	-,-,-,+,-	HSFX1,MAGEA9,HSFX2,CXorf40A,MAGEA9B	-601,-8466,-601,-51560,-8459
chrX:148677571-148678227	chrX	-	148854448	148855124	False	NM_016153,NM_032508,NM_005365,NM_001164415,NM_001080790	chrX,chrX,chrX,chrX,chrX	+,-,+,+,+	HSFX1,TMEM185A,MAGEA9,HSFX2,MAGEA9B	601,-140961,8475,601,8468
chrX:128688851-128689306	chrX	+	128688978	128689098	True	NM_139035,NM_001587	chrX,chrX	-,+	SMARCA1,OCRL	-31518,-14777
chr7:92463714-92464056	chr7	+	92463860	92463995	True	NM_001259,NR_026902,NM_001145306	chr7,chr7,chr7	-,+,-	CDK6,MGC16142,CDK6	-629,-296122,1997
chr6:97411524-97412396	chr6	+	97411652	97412217	True	NM_014165,NM_052904	chr6,chr6	-,+	NDUFAF4,KLHL32	-65885,-39207
chr17:73202099-73202534	chr17	+	73202216	73202550	True	NM_001005849,NM_024844	chr17,chr17	-,+	SUMO2,NUP85	-23118,-670
chr9:99583125-99584044	chr9	+	99583178	99583684	True	NR_028350,NM_001001662	chr9,chr9	+,-	LOC441454,ZNF782	87672,32759
chr16:84404117-84404842	chr16	+	84404166	84404732	True	NM_014861,NM_172347	chr16,chr16	+,-	ATP2C2,KCNG4	-2084,-130810
chr15:40236927-40237791	chr15	+	40236938	40237807	True	NM_007223,NM_001013703	chr15,chr15	-,+	GPR176,EIF2AK4	-23845,-10643
chr17:45917092-45918041	chr17	+	45917131	45917925	True	NM_138355,NR_037575,NM_148887,NM_001145023,NM_033413,NM_145255	chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,+,-	SCRN2,MRPL10,MRPL10,SCRN2,LRRC46,MRPL10	824,-8224,-8224,824,-8189,-8224
chr12:50080602-50081035	chr12	+	50080612	50080828	True	NM_003217,NM_175736	chr12,chr12	+,-	TMBIM6,FMNL3	54464,20421
chr1:101703975-101704510	chr1	+	101704105	101704508	True	NM_001400,NM_015958	chr1,chr1	+,-	S1PR1,DPH5	-1853,-212743
chr14:52791249-52792494	chr14	+	52791500	52792524	True	NM_000956,NM_001160047	chr14,chr14	+,-	PTGER2,TXNDC16	-10543,226827
chr16:31175808-31176302	chr16	+	31175883	31175953	True	NM_173502,NM_001170634	chr16,chr16	-,+	PRSS36,FUS	-14468,15477
chr10:75100076-75101270	chr10	+	75100081	75101267	True	NM_173348,NM_145170	chr10,chr10	+,-	FAM149B1,TTC18	-172255,17400
chr7:131243003-131244025	chr7	+	131243087	131243845	True	NM_001018111,NM_005397,NM_013255	chr7,chr7,chr7	-,-,+	PODXL,PODXL,MKLN1	-1711,-1711,-230544
chrX:72223637-72224133	chrX	+	72223778	72224090	True	NR_026595,NM_001042506	chrX,chrX	-,+	NCRNA00246,PABPC1L2B	-60189,-477
chrX:72223637-72224133	chrX	-	72298616	72298928	False	NM_001042506,NM_001012977	chrX,chrX	+,-	PABPC1L2B,PABPC1L2A	-75315,473
chr19:2868218-2869455	chr19	+	2868322	2869277	True	NM_021217,NM_024967	chr19,chr19	-,+	ZNF77,ZNF556	75742,-1046
chr6:15032686-15033377	chr6	+	15032703	15033109	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	213417,630230
chr6:112374785-112375134	chr6	+	112374786	112375162	True	NM_016262,NM_198239,NM_003880	chr6,chr6,chr6	-,+,+	TUBE1,WISP3,WISP3	33639,208,115
chr19:58398478-58399508	chr19	+	58398628	58399535	True	NM_001144989,NM_032828	chr19,chr19	-,+	ZNF814,ZNF587	957,-37505
chr11:31840146-31840528	chr11	+	31840159	31840457	True	NM_001127612,NR_033971,NM_001604,NM_000280	chr11,chr11,chr11,chr11	-,+,-,-	PAX6,DKFZp686K1684,PAX6,PAX6	-650,-2096,-7280,-7280
chr8:37454324-37455147	chr8	+	37454556	37455081	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	98219,150534
chr7:128413501-128414113	chr7	+	128413506	128413858	True	NM_001201372,NM_001708	chr7,chr7	+,-	CCDC136,OPN1SW	17605,2036
chr9:134375479-134377426	chr9	+	134375577	134376788	True	NM_001136114,NM_001136113,NR_002914,NM_001135954,NM_007171,NM_001077365,NM_001077366,NR_003050	chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9	+,+,+,-,+,+,+,+	POMT1,POMT1,SNORD62A,UCK1,POMT1,POMT1,POMT1,SNORD62B	1500,1500,-9755,29931,1500,1500,1500,-9755
chr10:71333344-71334225	chr10	+	71333596	71333976	True	NM_145306,NM_020999	chr10,chr10	+,-	C10orf35,NEUROG3	56026,-386
chr19:459761-460101	chr19	+	459764	460056	True	NM_012435,NM_130760	chr19,chr19	-,+	SHC2,MADCAM1	990,36433
chr1:22352001-22352420	chr1	+	22352048	22352470	True	NR_023919,NR_023918,NM_005529	chr1,chr1,chr1	+,+,-	HSPC157,HSPC157,HSPG2	-57,-392,-88298
chr17:30772083-30772437	chr17	+	30772165	30772451	True	NM_002815,NM_022344	chr17,chr17	+,-	PSMD11,C17orf75	-714,-102976
chr1:54427006-54427620	chr1	+	54427172	54427533	True	NM_052940,NM_016126	chr1,chr1	+,-	LRRC42,HSPB11	-15186,-15884
chr16:28503995-28505485	chr16	+	28504228	28505382	True	NM_001042432,NM_018690,NM_000086	chr16,chr16,chr16	-,+,-	CLN3,APOBR,CLN3	-605,610,-825
chr1:152595869-152596103	chr1	+	152595901	152596089	True	NM_178433,NM_178431	chr1,chr1	+,-	LCE3B,LCE3A	-9665,-322
chr11:47268146-47269197	chr11	+	47268538	47269232	True	NM_001130102,NM_001610,NM_001131064	chr11,chr11,chr11	+,-,-	NR1H3,ACP2,ACP2	1216,1275,1275
chr5:176778966-176779171	chr5	+	176779045	176779169	True	NM_006816,NM_006480	chr5,chr5	-,+	LMAN2,RGS14	-160,5674
chr22:25774926-25776581	chr22	+	25775592	25776537	True	NM_001135772,NR_029395	chr22,chr22	-,+	LRP5L,IGLL3P	1057,-61420
chr2:30672457-30673798	chr2	+	30672891	30673666	True	NM_182551,NM_001002257,NM_144575	chr2,chr2,chr2	+,+,-	LCLAT1,LCLAT1,CAPN13	-2819,-2805,356695
chr21:46826197-46826566	chr21	+	46826220	46826460	True	NM_130445,NR_028082	chr21,chr21	+,-	COL18A1,NCRNA00175	-1174,18545
chr6:35100513-35101225	chr6	+	35100685	35100879	True	NM_018679,NM_152753,NM_001093728	chr6,chr6,chr6	-,+,-	TCP11,SCUBE3,TCP11	8366,81310,8366
chr20:5293046-5294874	chr20	+	5293095	5294890	True	NM_144773,NR_029405	chr20,chr20	-,+	PROKR2,LOC643406	175,156951
chr11:707695-708027	chr11	+	707806	707970	True	NM_021008,NM_022772	chr11,chr11	-,+	DEAF1,EPS8L2	-12066,-1737
chr14:76127415-76127617	chr14	+	76127516	76127620	True	NM_015072,NM_007176	chr14,chr14	+,-	TTLL5,C14orf1	-16,10
chrX:153745885-153746117	chrX	+	153745891	153746133	True	NM_001171134,NM_021806,NM_001171132,NM_001171133,NM_001099856,NR_033237	chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,+,-	FAM3A,FAM3A,FAM3A,FAM3A,IKBKG,FAM3A	-1325,-1325,-1325,-1325,24325,-1325
chr1:89725576-89725974	chr1	+	89725611	89725841	True	NM_198460,NM_001134486	chr1,chr1	+,-	GBP6,GBP5	103594,12754
chr16:67515936-67517427	chr16	+	67516078	67516792	True	NM_004691,NM_001138,NM_024519	chr16,chr16,chr16	-,-,+	ATP6V0D1,AGRP,FAM65A	-989,974,45924
chr1:43024836-43026332	chr1	+	43025427	43025487	True	NM_032257,NM_001080850	chr1,chr1	-,+	ZMYND12,CCDC30	-103489,-24918
chr7:73497292-73497614	chr7	+	73497350	73497612	True	NM_002314,NM_001204426,NM_002914	chr7,chr7,chr7	+,+,-	LIMK1,LIMK1,RFC2	494,9873,171176
chr14:24105564-24106250	chr14	+	24105829	24106115	True	NM_032452,NM_005794,NM_182908	chr14,chr14,chr14	-,+,+	JPH4,DHRS2,DHRS2	-57820,-308,-308
chr9:139965306-139967230	chr9	+	139965755	139967135	True	NM_207309,NM_178448	chr9,chr9	+,-	UAP1L1,C9orf140	4817,-727
chr10:18545589-18547376	chr10	+	18545969	18547015	True	NM_000724,NM_182543	chr10,chr10	+,-	CACNB2,NSUN6	2568,393585
chr1:172716952-172717410	chr1	+	172717115	172717411	True	NM_000639,NM_005092	chr1,chr1	+,-	FASLG,TNFSF18	-88981,302742
chrY:21728899-21729158	chrY	+	21728918	21729206	True	NM_001005852,NR_033732	chrY,chrY	+,-	CYorf15A,BCORP1	28,-63879
chr16:66994151-66995235	chr16	+	66994154	66995226	True	NM_001185177,NM_001185176,NM_024922,NR_024525	chr16,chr16,chr16,chr16	+,+,+,-	CES3,CES3,CES3,FAM96B	-11,6151,-11,-25834
chr2:242625375-242625803	chr2	+	242625375	242625727	True	NM_012145,NR_033255,NM_001165031,NM_032329	chr2,chr2,chr2,chr2	-,-,-,+	DTYMK,DTYMK,DTYMK,ING5	706,706,706,15728
chr5:140699164-140699903	chr5	+	140699174	140699859	True	NM_005642,NM_031993	chr5,chr5	-,+	TAF7,PCDHGA1	551,10392
chr1:43807829-43809444	chr1	+	43807850	43809208	True	NM_022821,NM_005373	chr1,chr1	-,+	ELOVL1,MPL	24542,-4434
chr6:43969923-43970140	chr6	+	43969922	43970156	True	NM_001171992,NM_153246,NM_032111	chr6,chr6,chr6	+,+,-	C6orf223,C6orf223,MRPL14	-1636,-1636,125085
chr17:42348044-42348422	chr17	+	42348251	42348471	True	NM_001144826,NM_000342	chr17,chr17	+,-	RUNDC3A,SLC4A1	37455,-2749
chr15:65813589-65813917	chr15	+	65813745	65813917	True	NM_130434,NM_017743,NM_197961,NM_197960,NM_016395	chr15,chr15,chr15,chr15,chr15	-,-,-,-,+	DPP8,DPP8,DPP8,DPP8,PTPLAD1	-3710,-3710,-3710,-4136,8909
chr19:17932329-17932621	chr19	+	17932385	17932525	True	NM_014256,NM_005543	chr19,chr19	+,-	B3GNT3,INSL3	-26517,-65
chr8:23337831-23338179	chr8	+	23337849	23338179	True	NM_016612,NM_001128930	chr8,chr8	+,-	SLC25A37,ENTPD4	48183,-22605
chr10:73976645-73976952	chr10	+	73976652	73976935	True	NM_001198799,NM_001198800,NM_173473,NM_015947,NM_001198798	chr10,chr10,chr10,chr10,chr10	-,-,+,-,-	ASCC1,ASCC1,ANAPC16,ASCC1,ASCC1	-469,-469,-897,-901,-901
chr19:38811529-38812315	chr19	+	38811659	38812329	True	NM_001145462,NM_001145461,NM_001039671,NM_001145463,NM_001039673,NM_001039672,NM_004823	chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,+	YIF1B,YIF1B,YIF1B,YIF1B,YIF1B,YIF1B,KCNK6	-5214,-5214,-5214,-5053,-5053,-5053,-1226
chr8:104322700-104323300	chr8	+	104322840	104323302	True	NM_003506,NM_030780	chr8,chr8	+,-	FZD6,SLC25A32	-11832,104216
chr22:37823368-37823573	chr22	+	37823387	37823621	True	NM_152243,NM_052906	chr22,chr22	+,-	CDC42EP1,ELFN2	132849,-66
chr15:70125780-70127099	chr15	+	70126054	70127061	True	NR_026764,NR_030714	chr15,chr15	+,-	C15orf50,MIR629	511,244803
chr11:64086374-64087104	chr11	+	64086463	64086950	True	NM_181652,NM_012094,NM_016404,NM_181651	chr11,chr11,chr11,chr11	+,+,-,+	PRDX5,PRDX5,TRMT112,PRDX5	-945,-945,-1430,-945
chr1:205603820-205604588	chr1	+	205603901	205604295	True	NM_021795,NM_001973,NM_181644	chr1,chr1,chr1	-,-,+	ELK4,ELK4,MFSD4	-1901,-1901,-65847
chr5:79948505-79950030	chr5	+	79948606	79949934	True	NM_001190470,NM_002439,NM_000791	chr5,chr5,chr5	-,+,-	MTRNR2L2,MSH3,DHFR	-1752,359,916
chr19:19007731-19008818	chr19	+	19007790	19008324	True	NM_198207,NM_021267,NM_019070,NM_001492	chr19,chr19,chr19,chr19	-,-,+,-	LASS1,LASS1,DDX49,GDF1	-837,-837,22159,-837
chr14:47764622-47764826	chr14	+	47764622	47764836	True	NM_182830,NM_020937	chr14,chr14	-,+	MDGA2,FANCM	47662,-2159548
chr19:48675081-48675319	chr19	+	48675127	48675319	True	NM_000234,NM_153608	chr19,chr19	-,+	LIG1,ZNF114	-1567,99334
chr3:139188177-139189047	chr3	+	139188239	139188839	True	NM_004164,NM_020191	chr3,chr3	-,+	RBP2,MRPS22	6563,-125430
chr10:18554353-18555537	chr10	+	18554779	18555539	True	NM_000724,NM_182543	chr10,chr10	+,-	CACNB2,NSUN6	-5249,385061
chr19:9217627-9218424	chr19	+	9217971	9218373	True	NM_001005192,NM_001005193,NM_001004456	chr19,chr19,chr19	-,-,+	OR7G1,OR7G2,OR1M1	8116,-3989,-14103
chr4:105411436-105412238	chr4	+	105411475	105412156	True	NM_025212,NM_017628	chr4,chr4	-,+	CXXC4,TET2	361,654875
chr8:117747734-117748822	chr8	+	117747737	117748629	True	NM_003756,NM_032334	chr8,chr8	-,+	EIF3H,UTP23	19490,30112
chr5:87521234-87522083	chr5	+	87521234	87522133	True	NM_153354,NM_022650	chr5,chr5	-,+	TMEM161B,RASA1	42590,-956527
chr14:92979532-92979769	chr14	+	92979537	92979723	True	NM_001008530,NM_024832	chr14,chr14	-,+	LGMN,RIN3	235374,401
chr19:19926137-19927257	chr19	+	19926230	19926664	True	NM_001099269,NM_021047,NM_001145404	chr19,chr19,chr19	-,+,-	ZNF506,ZNF253,ZNF506	5956,50049,5956
chr1:175013893-175014336	chr1	+	175013968	175014288	True	NR_037606,NM_022093	chr1,chr1	-,+	MRPS14,TNN	-21377,22705
chr3:146256759-146257390	chr3	+	146257250	146257406	True	NM_003412,NM_021105	chr3,chr3	+,-	ZIC1,PLSCR1	869774,5274
chr19:53851416-53852676	chr19	+	53851803	53852524	True	NM_138374,NM_033341	chr19,chr19	+,-	ZNF845,BIRC8	-14859,-56928
chr15:45407291-45407976	chr15	+	45407411	45408023	True	NM_207581,NM_014080	chr15,chr15	+,-	DUOXA2,DUOX2	-939,-1052
chr2:24234074-24234867	chr2	+	24234073	24234795	True	NM_001080473,NM_001142319	chr2,chr2	+,-	MFSD2B,C2orf44	-1171,35551
chr17:26989565-26991177	chr17	+	26989594	26991216	True	NM_006923,NM_003170	chr17,chr17	-,+	SDF2,SUPT6H	-661,-343
chr13:20196500-20197003	chr13	+	20196532	20196869	True	NM_199254,NM_017520	chr13,chr13	-,+	TPTE2,MPHOSPH8	-85629,10918
chr10:98481034-98481622	chr10	+	98481037	98481583	True	NM_152309,NM_001170765	chr10,chr10	-,+	PIK3AP1,LCOR	-758,110433
chr12:6938636-6939147	chr12	+	6938651	6939139	True	NM_014262,NM_031299,NM_019858,NM_014449	chr12,chr12,chr12,chr12	+,-,+,+	LEPREL2,CDCA3,GPR162,GPR162	-1130,21367,-7739,-7739
chr4:175699358-175699714	chr4	+	175699357	175699601	True	NM_001130703,NM_001042543	chr4,chr4	+,-	ADAM29,GLRA3	139907,50924
chr1:216897282-216899162	chr1	+	216897287	216899189	True	NM_001438,NR_024099,NM_138796	chr1,chr1,chr1	-,-,+	ESRRG,ESRRG,SPATA17	-480,-492,905505
chr17:28704883-28705167	chr17	+	28704882	28705157	True	NM_206832,NM_001199775,NM_001304	chr17,chr17,chr17	-,+,+	TMIGD1,CPD,CPD	-43817,2338,784
chr20:42870278-42871188	chr20	+	42870579	42871013	True	NM_024034,NM_016470	chr20,chr20	+,-	GDAP1L1,C20orf111	4894,-31148
chr3:89163816-89164227	chr3	+	89163830	89164252	True	NM_182644,NM_001195308,NM_005233	chr3,chr3,chr3	+,-,+	EPHA3,CGGBP1,EPHA3	-7207,-964814,-7207
chr1:165799854-165800058	chr1	+	165799890	165799968	True	NM_019026,NM_012474	chr1,chr1	-,+	TMCO1,UCK2	-61755,-3219
chr12:52396567-52397130	chr12	+	52396570	52397120	True	NM_181711,NM_001013690	chr12,chr12	+,-	GRASP,FIGNL2	3627,-170869
chr6:106546752-106547094	chr6	+	106546779	106547121	True	NM_182907,NM_004849	chr6,chr6	+,-	PRDM1,ATG5	-18,226624
chr19:19498011-19499109	chr19	+	19498022	19498866	True	NM_172231,NM_017660	chr19,chr19	-,+	SUGP1,GATAD2A	-66715,-1431
chr12:57613466-57614063	chr12	+	57613584	57613866	True	NM_005412,NM_020142,NR_029416,NR_029417,NM_001166358,NM_007224,NM_001166356	chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,-,+,+,+,+,+	SHMT2,NDUFA4L2,SHMT2,SHMT2,SHMT2,NXPH4,SHMT2	9489,20659,9961,9489,9961,-3057,9489
chr9:99214229-99215361	chr9	+	99214528	99215193	True	NM_153695,NM_014282	chr9,chr9	-,+	ZNF367,HABP4	-33859,-2174
chr11:18812513-18812722	chr11	+	18812513	18812763	True	NM_153347,NM_001039970,NM_032781,NM_006906	chr11,chr11,chr11,chr11	+,-,-,-	TMEM86A,PTPN5,PTPN5,PTPN5	-92213,676,676,676
chr7:150328768-150329303	chr7	+	150328797	150329327	True	NM_024711,NM_015660,NR_024115	chr7,chr7,chr7	-,+,-	GIMAP6,GIMAP2,GIMAP6	403,53466,403
chr17:15524286-15525041	chr17	+	15524486	15524906	True	NM_006382,NM_001130842	chr17,chr17	-,+	CDRT1,ZNF286A	-1468,77984
chr17:15524286-15525041	chr17	-	18645488	18645904	False	NM_001145045,NM_031456	chr17,chr17	-,+	ZNF286B,FBXW10	-59916,1421
chr13:49953304-49954136	chr13	+	49953921	49953985	True	NM_031915,NM_030925	chr13,chr13	+,-	SETDB2,CAB39L	64443,21804
chr19:8408159-8408377	chr19	+	8408162	8408398	True	NM_001039667,NM_198471	chr19,chr19	+,-	ANGPTL4,KANK3	20612,-16
chr1:179333946-179334233	chr1	+	179333997	179334189	True	NM_001136001,NM_144696	chr1,chr1	-,+	ABL2,AXDND1	-135178,665
chrY:14106331-14106875	chrY	+	14106476	14106842	True	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	667455,426597
chr10:99330445-99331318	chr10	+	99330468	99331362	True	NM_178832,NM_001129981,NM_020349	chr10,chr10,chr10	-,+,+	MORN4,ANKRD2,ANKRD2	62032,893,893
chr12:9356096-9357438	chr12	+	9356246	9357191	True	NM_002864,NR_036466	chr12,chr12	-,+	PZP,LOC100499405	3836,35407
chrX:100634595-100635916	chrX	+	100634667	100635494	True	NM_000061,NM_021029	chrX,chrX	-,+	BTK,RPL36A	5775,10383
chr17:21450956-21451880	chr17	+	21451135	21451865	True	NM_001113434,NM_001194958	chr17,chr17	-,+	C17orf51,KCNJ18	3126,-142744
chr8:23082512-23082968	chr8	+	23082517	23082987	True	NR_033928,NM_003844	chr8,chr8	+,-	LOC389641,TNFRSF10A	-62,-65
chr22:37641629-37642296	chr22	+	37641635	37642102	True	NM_013385,NM_002872	chr22,chr22	+,-	CYTH4,RAC2	36392,-1330
chr4:115558494-115559287	chr4	+	115558494	115559132	True	NM_022569,NM_003360	chr4,chr4	-,+	NDST4,UGT8	475954,-15032
chr2:210636948-210637381	chr2	+	210637068	210637333	True	NM_152519,NM_032504,NM_182587	chr2,chr2,chr2	-,+,+	C2orf67,UNC80,UNC80	398769,-416,-416
chr6:136874005-136875945	chr6	+	136874059	136875795	True	NM_000288,NM_001198616,NM_001198617,NM_003980	chr6,chr6,chr6,chr6	+,-,-,-	PEX7,MAP7,MAP7,MAP7	267906,-2102,-2102,-2102
chr6:79769709-79770882	chr6	+	79769756	79770519	True	NM_001010844,NM_017934	chr6,chr6	+,-	IRAK1BP1,PHIP	-192619,17542
chr13:27746562-27747273	chr13	+	27746675	27747233	True	NM_000982,NM_182488	chr13,chr13	+,-	RPL21,USP12	78458,-642
chr17:53043114-53045025	chr17	+	53043354	53044792	True	NM_001162862,NM_001162861,NM_178509,NR_027941,NR_027942,NM_004375	chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,-,-,-	COX11,COX11,STXBP4,COX11,COX11,COX11	1322,1322,1333,1322,1322,1322
chr1:111957008-111957228	chr1	+	111957009	111957243	True	NM_001688,NM_002557	chr1,chr1	+,-	ATP5F1,OVGP1	34499,13206
chr11:36397566-36397827	chr11	+	36397583	36397847	True	NM_024841,NM_001160168,NM_014186	chr11,chr11,chr11	+,+,-	PRR5L,PRR5L,COMMD9	-99,-99,-86584
chr17:1734150-1735051	chr17	+	1734409	1734699	True	NM_052928,NM_002945	chr17,chr17	-,+	SMYD4,RPA1	-1234,-1195
chr11:87907927-87908302	chr11	+	87908029	87908303	True	NM_022337,NM_000372	chr11,chr11	-,+	RAB38,TYR	382,1002736
chr18:31020241-31020554	chr18	+	31020451	31020533	True	NM_030632,NM_001105528,NM_198995	chr18,chr18,chr18	+,-,-	ASXL3,C18orf34,C18orf34	138007,-406,202
chr2:49287332-49287880	chr2	+	49287343	49287900	True	NM_000145,NM_006872	chr2,chr2	-,+	FSHR,GTF2A1L	93816,-442462
chr3:69937792-69939555	chr3	+	69937806	69939600	True	NM_015123,NM_198177	chr3,chr3	-,+	FRMD4B,MITF	-502376,-22490
chr2:29199091-29201066	chr2	+	29199527	29200767	True	NM_199280,NM_001029883	chr2,chr2	+,-	FAM179A,C2orf71	3396,96410
chr16:57435156-57435758	chr16	+	57435499	57435667	True	NM_020313,NM_002987	chr16,chr16	-,+	CIAPIN1,CCL17	45752,3011
chrX:70503846-70504341	chrX	+	70503884	70504385	True	NM_007363,NM_001171162,NM_001145410,NM_001145409,NM_001145408	chrX,chrX,chrX,chrX,chrX	+,-,+,+,+	NONO,ZMYM3,NONO,NONO,NONO	-893,-28837,-893,-893,-893
chr10:95721408-95721666	chr10	+	95721522	95721714	True	NR_002319,NM_016341	chr10,chr10	-,+	PIPSL,PLCE1	8,32031
chr22:37822721-37822934	chr22	+	37822722	37822786	True	NM_152243,NM_052906	chr22,chr22	+,-	CDC42EP1,ELFN2	133684,769
chr3:140774792-140775108	chr3	+	140774950	140775152	True	NM_001178140,NM_080862	chr3,chr3	-,+	TFDP2,SPSB4	944127,-4258
chr3:48884612-48884824	chr3	+	48884612	48884704	True	NM_006321,NM_004157	chr3,chr3	+,-	ARIH2,PRKAR2A	71576,616
chr11:67718332-67718591	chr11	+	67718335	67718607	True	NM_030930,NM_001161473	chr11,chr11	-,+	UNC93B1,ALDH3B1	53036,57440
chr20:1303649-1304134	chr20	+	1303692	1304166	True	NM_015685,NM_014723,NM_001199784,NM_080489	chr20,chr20,chr20,chr20	-,+,-,-	SDCBP2,SNPH,SDCBP2,SDCBP2	-9375,-56783,2397,5763
chr5:140742015-140743979	chr5	+	140742020	140743842	True	NM_018924,NM_032086,NM_032097,NM_018923,NM_032096,NM_032054,NM_018918,NM_018919,NM_032053,NM_005642,NM_018917	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,+,+,+,-,+	PCDHGB3,PCDHGA6,PCDHGB3,PCDHGB2,PCDHGB2,PCDHGA5,PCDHGA5,PCDHGA6,PCDHGA4,TAF7,PCDHGA4	6119,9808,6119,-2368,-2368,55,55,9808,-7303,-41669,-7303
chr22:32146342-32146688	chr22	+	32146360	32146726	True	NM_001007188,NM_014662,NM_001136029,NM_173566	chr22,chr22,chr22,chr22	+,+,+,-	DEPDC5,DEPDC5,DEPDC5,PRR14L	3342,3342,4126,-240
chr9:130534099-130534681	chr9	+	130534116	130534523	True	NM_001142532,NR_036055,NM_001142531,NM_005489,NM_170600	chr9,chr9,chr9,chr9,chr9	-,+,-,-,-	SH2D3C,MIR2861,SH2D3C,SH2D3C,SH2D3C	-9419,13673,-9397,-495,6578
chr1:57111334-57111585	chr1	+	57111372	57111628	True	NM_003713,NM_006252	chr1,chr1	-,+	PPAP2B,PRKAA2	-66115,-433
chr7:150067541-150068202	chr7	+	150067662	150068205	True	NM_002889,NM_173680,NM_013400,NM_014374,NM_001099695,NM_001099696	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,+,+	RARRES2,ZNF775,REPIN1,REPIN1,REPIN1,REPIN1	-28899,8200,-1842,52,-1842,-1842
chr16:2768477-2768959	chr16	+	2768610	2768822	True	NM_016333,NM_031948	chr16,chr16	+,-	SRRM2,PRSS27	33507,1780
chr7:139476782-139477112	chr7	+	139476831	139477127	True	NM_001166254,NM_022740,NM_001130966,NM_001113239	chr7,chr7,chr7,chr7	+,-,+,-	TBXAS1,HIPK2,TBXAS1,HIPK2	919,616,919,616
chr17:72859061-72859289	chr17	+	72859265	72859337	True	NM_000835,NM_178160,NM_004110,NM_024417	chr17,chr17,chr17,chr17	-,+,-,-	GRIN2C,OTOP2,FDXR,FDXR	-3258,61032,9869,9869
chr16:84152924-84153269	chr16	+	84152950	84153300	True	NM_003791,NM_178452	chr16,chr16	-,+	MBTPS1,LRRC50	-2433,25564
chr10:104498352-104499388	chr10	+	104498359	104499309	True	NM_004311,NM_001083913	chr10,chr10	-,+	ARL3,C10orf26	-24169,4417
chr9:100952057-100952257	chr9	+	100952107	100952172	True	NM_018946,NM_052820	chr9,chr9	+,-	NANS,CORO2A	-133207,2839
chr2:148596197-148597825	chr2	+	148596357	148597785	True	NM_001190882,NM_001616	chr2,chr2	-,+	ORC4,ACVR2A	180583,4784
chr14:90203975-90204684	chr14	+	90204137	90204615	True	NR_024620,NM_001085471	chr14,chr14	+,-	PRO1768,FOXN3	-161629,-118643
chr1:161680279-161681129	chr1	+	161680333	161681035	True	NM_001184866,NM_001184867,NM_001184873,NM_001184872,NM_032738,NM_001184870,NM_001184871,NR_002595	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,+,+,-	FCRLA,FCRLA,FCRLA,FCRLA,FCRLA,FCRLA,FCRLA,RPL31P11	-3622,-3622,-3622,-3622,-3622,-3622,-3622,-25291
chr14:24686789-24687626	chr14	+	24687198	24687650	True	NM_014169,NM_001199821,NM_001199822,NM_138476,NM_174944	chr14,chr14,chr14,chr14,chr14	-,-,-,-,+	CHMP4A,MDP1,MDP1,MDP1,TSSK4	-4162,-1922,-1922,-1922,-12323
chr16:48657056-48657268	chr16	+	48657148	48657224	True	NM_153029,NM_031490	chr16,chr16	-,+	N4BP1,LONP2	-13028,-378988
chr19:4967929-4968305	chr19	+	4967990	4968278	True	NM_015015,NM_001080523	chr19,chr19	+,-	KDM4B,ARRDC5	845,-65111
chr15:34677590-34678773	chr15	+	34677603	34678371	True	NM_175741,NR_036050,NM_181077,NR_036261	chr15,chr15,chr15,chr15	+,-,-,-	C15orf55,MIR1233-1,GOLGA8A,MIR1233-2	-39588,-3252,3680,-3252
chr15:34677590-34678773	chr15	+	34823824	34824422	False	NM_001023567,NM_175741,NR_036050,NR_036261	chr15,chr15,chr15,chr15	-,+,-,-	GOLGA8B,C15orf55,MIR1233-1,MIR1233-2	3850,-185809,-3252,-3252
chr12:53689608-53690351	chr12	+	53689628	53690078	True	NM_021640,NM_002624,NM_001173466,NM_145897	chr12,chr12,chr12,chr12	+,+,-,+	C12orf10,PFDN5,AAAS,PFDN5	3391,-444,25384,-444
chr2:237074646-237074859	chr2	+	237074665	237074825	True	NM_020311,NM_001485	chr2,chr2	+,-	CXCR7,GBX2	403554,1877
chr4:41749603-41749949	chr4	+	41749671	41749966	True	NM_001112720,NM_003924	chr4,chr4	+,-	LIMCH1,PHOX2B	-134803,1072
chr9:139094176-139094427	chr9	+	139094176	139094448	True	NM_015597,NM_014564,NM_178138	chr9,chr9,chr9	+,-,-	GPSM1,LHX3,LHX3	127483,606,2557
chr2:191399778-191400890	chr2	+	191399852	191400935	True	NM_001142645,NM_005966	chr2,chr2	-,+	TMEM194B,NAB1	-384,112912
chr1:26484396-26485334	chr1	+	26484401	26485367	True	NM_024869,NM_032588	chr1,chr1	+,-	GRRP1,TRIM63	143,-90280
chr19:55083099-55084329	chr19	+	55083264	55084282	True	NM_001130917,NM_006866,NM_145057	chr19,chr19,chr19	+,+,-	LILRA2,LILRA2,CDC42EP5	974,974,-98842
chr7:36425686-36427115	chr7	+	36425802	36426953	True	NM_018685,NM_001100425	chr7,chr7	+,-	ANLN,KIAA0895	2478,2842
chr16:55691752-55692143	chr16	+	55691842	55692126	True	NM_001025194,NM_001172501,NM_001043,NM_001172504	chr16,chr16,chr16,chr16	-,+,+,+	CES1,SLC6A2,SLC6A2,SLC6A2	174999,-2351,-1541,-1337
chrX:47061878-47062128	chrX	+	47062003	47062153	True	NM_003334,NR_024235,NR_024616	chrX,chrX,chrX	+,-,+	UBA1,NDUFB11,INE1	-8853,-57394,2093
chr17:16284397-16284644	chr17	+	16284421	16284671	True	NM_018955,NM_181716	chr17,chr17	+,-	UBB,CENPV	-105,-27609
chr22:39013597-39015419	chr22	+	39013671	39015115	True	NM_001002880,NM_001013647	chr22,chr22	+,-	CBY1,LOC646851	37542,37569
chr12:4226794-4227245	chr12	+	4226880	4227285	True	NM_001759,NM_020367	chr12,chr12	+,-	CCND2,PARP11	155616,-244272
chr6:36563993-36564675	chr6	+	36564062	36564652	True	NM_003017,NR_037491,NR_036610	chr6,chr6,chr6	+,-,+	SRSF3,MIR3925,SRSF3	-2029,25687,-2029
chr3:167451743-167452310	chr3	+	167451835	167452099	True	NM_007217,NM_145860,NM_005025,NM_001122752,NM_145859	chr3,chr3,chr3,chr3,chr3	-,-,+,+,-	PDCD10,PDCD10,SERPINI1,SERPINI1,PDCD10	545,581,1411,1332,602
chr20:18488325-18488570	chr20	+	18488360	18488490	True	NM_006606,NM_006363,NM_032986,NM_032985,NM_001172746,NM_001172745	chr20,chr20,chr20,chr20,chr20,chr20	-,+,+,+,+,+	RBBP9,SEC23B,SEC23B,SEC23B,SEC23B,SEC23B	-10473,-223,-223,-223,-201,116
chr2:239111358-239111680	chr2	+	239111362	239111722	True	NM_030768,NR_026923	chr2,chr2	-,+	ILKAP,LOC643387	652,28604
chr11:126044425-126044751	chr11	+	126044429	126044702	True	NM_001144827,NM_024556	chr11,chr11	-,+	RPUSD4,FAM118B	36936,36916
chr2:85554469-85554679	chr2	+	85554478	85554712	True	NM_001135021,NM_006464	chr2,chr2	+,-	ELMOD3,TGOLN2	27130,712
chr8:21912407-21912994	chr8	+	21912433	21913009	True	NM_001978,NM_024815,NM_001114135,NM_001114137,NM_001114136,NM_001114139,NM_001114138	chr8,chr8,chr8,chr8,chr8,chr8,chr8	+,-,+,+,+,+,+	EPB49,NUDT18,EPB49,EPB49,EPB49,EPB49,EPB49	3676,53973,2366,-1403,-156,-156,3676
chr15:69124428-69126392	chr15	+	69124683	69126282	True	NR_031680,NM_006305	chr15,chr15	+,-	MIR548H4,ANP32A	-8438,-11422
chr16:85932935-85934226	chr16	+	85932992	85934140	True	NM_002163,NM_006067	chr16,chr16	+,-	IRF8,COX4NB	-269,-99844
chr3:197686000-197686918	chr3	+	197686095	197686786	True	NR_026787,NR_026786,NM_001134435,NM_032263,NM_000996,NM_001136049,NM_033029	chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,-,-,+,+,+	LMLN,LMLN,IQCG,IQCG,RPL35A,LMLN,LMLN	284,284,-9299,151,-9095,284,284
chr1:17309663-17310016	chr1	+	17309855	17310045	True	NM_014675,NM_002403,NM_001135248,NM_001135247,NM_017459	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	CROCC,MFAP2,MFAP2,MFAP2,MFAP2	-61462,-2682,-2682,-1774,-1774
chr17:76210245-76210499	chr17	+	76210332	76210482	True	NM_001168,NR_002219,NM_001012271,NM_001012270	chr17,chr17,chr17,chr17	+,-,+,+	BIRC5,EPR1,BIRC5,BIRC5	-106,10351,-106,-106
chr3:172244439-172244978	chr3	+	172244620	172244705	True	NM_018098,NR_033994,NM_003810,NM_001190942,NM_001190943	chr3,chr3,chr3,chr3,chr3	+,-,-,-,-	ECT2,TNFSF10,TNFSF10,TNFSF10,TNFSF10	227592,-3323,-3323,-3323,-3355
chr17:43212540-43212857	chr17	+	43212632	43212790	True	NM_024722,NM_001135704,NM_001135707,NM_001135706,NM_001135705,NM_133373	chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,-	ACBD4,ACBD4,ACBD4,ACBD4,ACBD4,PLCD3	223,-2716,223,223,223,-2741
chr10:135236384-135236666	chr10	+	135236394	135236602	True	NM_138384,NM_001012508	chr10,chr10	+,-	MTG1,SPRN	-28824,1569
chr15:41781593-41783137	chr15	+	41781739	41783188	True	NM_002220,NM_001135685	chr15,chr15	+,-	ITPKA,LTK	2933,22950
chr15:43802638-43802880	chr15	+	43802812	43802890	True	NM_002373,NM_005657	chr15,chr15	+,-	MAP1A,TP53BP1	6915,-105
chr12:44151132-44152578	chr12	+	44151366	44152600	True	NM_016123,NM_001114182,NM_031292,NM_001145258,NM_001098615,NM_001098614,NM_001145256,NM_001145257	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,-,+,-,-,+,+	IRAK4,IRAK4,PUS7L,IRAK4,PUS7L,PUS7L,IRAK4,IRAK4	146,146,46,146,11,12,146,146
chr3:87039898-87040119	chr3	+	87039978	87040168	True	NM_016206,NM_014043	chr3,chr3	-,+	VGLL3,CHMP2B	139,236244
chr5:137548166-137548869	chr5	+	137548287	137548781	True	NM_005733,NM_004661	chr5,chr5	+,-	KIF20A,CDC23	-33925,301
chr8:104144883-104146044	chr8	+	104144956	104146066	True	NM_024812,NM_001024372,NR_027071	chr8,chr8,chr8	+,+,-	BAALC,BAALC,C8orf56	6854,6854,7554
chr5:177560871-177561900	chr5	+	177561077	177561573	True	NM_022762,NM_001034833	chr5,chr5	+,-	RMND5B,NHP2	-3100,19438
chr3:9921576-9922780	chr3	+	9921798	9922303	True	NM_032492,NM_022094,NM_001199551,NM_001199552,NM_001199623	chr3,chr3,chr3,chr3,chr3	+,-,-,-,-	JAGN1,CIDEC,CIDEC,CIDEC,CIDEC	9967,-1058,140,140,-1302
chr2:73293087-73293406	chr2	+	73293088	73293314	True	NM_144579,NM_001134462	chr2,chr2	-,+	SFXN5,NOTO	5701,136071
chr20:39319954-39320576	chr20	+	39319977	39320570	True	NM_003286,NM_005461	chr20,chr20	+,-	TOP1,MAFB	336891,-2101
chr12:53439995-53440687	chr12	+	53440351	53440675	True	NM_198316,NM_015319,NR_033854,NM_170754	chr12,chr12,chr12,chr12	+,+,-,+	TENC1,TENC1,LOC283335,TENC1	134,2057,7597,3159
chrX:2667676-2668438	chrY	+	2617684	2618390	False	NR_003254,NM_003140	chrY,chrY	+,-	XGPY2,SRY	1946,37459
chrX:2667676-2668438	chrX	+	2667684	2668390	True	NM_001141919,NM_001141920,NR_003254,NR_037842,NM_175569	chrX,chrX,chrX,chrX,chrX	+,+,+,-,+	XG,XG,XGPY2,NCRNA00102,XG	1702,1702,1946,-134296,1702
chr11:112851678-112852833	chr11	+	112851818	112852776	True	NR_034101,NM_181351	chr11,chr11	-,+	LOC100288346,NCAM1	291897,-19889
chr14:95029052-95029716	chr14	+	95029098	95029656	True	NM_006215,NM_173850	chr14,chr14	+,-	SERPINA4,SERPINA12	-1373,-44917
chr1:68960606-68962347	chr1	+	68961204	68962336	True	NM_017779,NM_001114120,NM_001924	chr1,chr1,chr1	-,-,+	DEPDC1,DEPDC1,GADD45A	513,513,-810395
chr19:54621788-54622281	chr19	+	54621791	54622328	True	NM_013342,NM_015629	chr19,chr19	-,+	TFPT,PRPF31	-2736,-3052
chr10:122891671-122893046	chr10	+	122891817	122893007	True	NM_018117,NR_033850	chr10,chr10	+,-	WDR11,LOC283089	-281181,-281126
chr1:6545956-6546329	chr1	+	6546126	6546188	True	NM_001042665,NM_001042664,NM_020631,NM_031475	chr1,chr1,chr1,chr1	-,-,-,+	PLEKHG5,PLEKHG5,PLEKHG5,ESPN	-112,4502,5622,-61329
chr22:45095297-45096063	chr22	+	45095317	45095924	True	NM_181333,NM_181334,NM_032287	chr22,chr22,chr22	+,+,-	PRR5,PRR5-ARHGAP8,LDOC1L	2153,2457,-201312
chr20:4990663-4991388	chr20	+	4990774	4991284	True	NM_005116,NR_028370,NM_203327	chr20,chr20,chr20	-,+,-	SLC23A2,PCNA-AS1,SLC23A2	-8629,108947,3
chrX:100228476-100228683	chrX	+	100228492	100228710	True	NM_212559,NM_001012990,NM_001162491,NM_001162490	chrX,chrX,chrX,chrX	-,+,+,+	XKRX,ARL13A,ARL13A,ARL13A	-44594,-3854,-3854,-3854
chr16:3448481-3449145	chr16	+	3448592	3448936	True	NM_017810,NM_001032292,NM_003450	chr16,chr16,chr16	-,+,+	ZNF434,ZNF174,ZNF174	2139,2253,2253
chr15:72410463-72410751	chr15	+	72410547	72410767	True	NM_145204,NM_006901,NM_001172109,NM_001166340,NM_001172111,NM_001172110	chr15,chr15,chr15,chr15,chr15,chr15	+,-,+,+,+,+	SENP8,MYO9A,SENP8,SENP8,SENP8,SENP8	33,-125,-1406,-3999,33,-1352
chr1:1312413-1312917	chr1	+	1312443	1312671	True	NM_001127230,NM_017900,NM_001127229,NR_015434	chr1,chr1,chr1,chr1	-,-,-,+	AURKAIP1,AURKAIP1,AURKAIP1,LOC148413	-1881,-1625,-1863,22238
chr2:39992591-39993175	chr2	+	39992861	39993213	True	NM_152390,NM_025264	chr2,chr2	+,-	TMEM178,THUMPD2	-99877,13253
chr11:9447348-9448516	chr11	+	9448064	9448136	True	NR_002962,NR_036539	chr11,chr11	+,-	SNORA23,LOC644656	2176,34167
chr19:43442632-43442989	chr19	+	43442641	43442845	True	NM_002783,NR_036584	chr19,chr19	-,+	PSG7,LOC100289650	-1311,-116677
chr20:5294874-5295257	chr20	+	5294878	5295200	True	NM_144773,NR_029405	chr20,chr20	-,+	PROKR2,LOC643406	29,156641
chr18:57014475-57014743	chr18	+	57014590	57014786	True	NM_005570,NM_002091	chr18,chr18	-,+	LMAN1,GRP	11776,-127249
chr1:145413311-145414707	chr1	+	145413489	145414734	True	NM_213652,NM_145277,NM_032305,NM_213653,NM_202004	chr1,chr1,chr1,chr1,chr1	+,+,-,+,+	HFE2,HFE2,POLR3GL,HFE2,HFE2	-349,-349,55703,-349,-349
chr6:42683734-42684650	chr6	+	42683762	42683986	True	NM_000322,NR_037141	chr6,chr6	-,+	PRPH2,LOC442211	6422,11327
chr19:47812686-47812935	chr19	+	47812843	47812941	True	NM_001736,NM_001127242	chr19,chr19	+,-	C5AR1,BBC3	162,-76820
chr18:72169219-72169817	chr18	+	72169435	72169869	True	NM_018235,NM_001044369,NM_001168499	chr18,chr18,chr18	+,-,+	CNDP2,FAM69C,CNDP2	-5988,-44932,-2665
chr19:6529366-6530757	chr19	+	6529645	6530777	True	NM_003811,NM_006087	chr19,chr19	+,-	TNFSF9,TUBB4	232,-27315
chr16:57829896-57830326	chr16	+	57830096	57830358	True	NM_001130099,NM_001130100,NM_005550,NM_005886	chr16,chr16,chr16,chr16	-,-,-,+	KIFC3,KIFC3,KIFC3,KATNB1	1621,6131,6131,-60488
chr19:19639066-19639312	chr19	+	19639136	19639296	True	NM_032037,NM_153221,NM_001190328,NM_198537	chr19,chr19,chr19,chr19	-,+,+,+	TSSK6,CILP2,YJEFN3,YJEFN3	-12667,9777,373,373
chr12:54363339-54363941	chr12	+	54363343	54363765	True	NM_014212,NR_003716	chr12,chr12	+,-	HOXC11,HOTAIR	3144,-828
chr11:110297212-110298719	chr11	+	110297232	110298468	True	NM_002906,NM_004109	chr11,chr11	-,+	RDX,FDX1	-129795,2125
chr2:114357730-114358427	chr12	+	92330	92380	True	NR_028269,NR_026823	chr12,chr12	+,-	LOC100288778,FAM138D	-4397,57082
chr10:126137464-126137809	chr10	+	126137643	126137723	True	NM_001146340,NM_001167880	chr10,chr10	-,+	NKX1-2,LHPP	877,12617
chr16:2581185-2581759	chr16	+	2581392	2581774	True	NM_001048212,NR_036139,NM_031268,NM_002613	chr16,chr16,chr16,chr16	-,-,+,+	CEMP1,MIR3178,PDPK1,PDPK1	3,282,6195,6195
chr11:94731789-94732300	chr11	+	94731846	94732332	True	NM_016403,NM_018039	chr11,chr11	-,+	CWC15,KDM4D	-25070,-25052
chr19:23865710-23866382	chr19	+	23866024	23866269	True	NM_138330,NR_003662	chr19,chr19	-,+	ZNF675,RPSAP58	3799,79546
chrX:133372561-133373666	chrX	+	133372697	133373691	True	NM_001101357,NR_029523	chrX,chrX	+,-	CCDC160,MIR106A	-1681,-68389
chr1:119908277-119908760	chr1	+	119908441	119908741	True	NM_001005783,NM_016527,NM_201263	chr1,chr1,chr1	+,+,-	HAO2,HAO2,WARS2	2660,2660,-225146
chr2:191877733-191878076	chr2	+	191877788	191878092	True	NM_139266,NM_014905,NM_007315	chr2,chr2,chr2	-,+,-	STAT1,GLS,STAT1	934,-132292,934
chr9:130341311-130341526	chr9	+	130341371	130341519	True	NM_001032221,NM_001035534	chr9,chr9	+,-	STXBP1,FAM129B	32966,-103
chr21:15646375-15646630	chr21	+	15646409	15646655	True	NR_003088,NR_003087,NM_198996	chr21,chr21,chr21	+,+,-	ABCC13,ABCC13,LIPI	-340,-340,-67155
chr6:88867702-88867996	chr6	+	88867723	88868038	True	NM_001160259,NM_001160258,NM_001160226,NM_030960,NM_001160260,NM_016083	chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,+,-,-	CNR1,CNR1,CNR1,SPACA1,CNR1,CNR1	7788,7788,7788,-110270,-6841,7788
chr1:154831633-154832922	chr1	+	154831753	154832969	True	NM_001826,NM_001204087,NM_002249,NM_170782	chr1,chr1,chr1,chr1	+,-,-,-	CKS1B,KCNN3,KCNN3,KCNN3	114148,9835,9835,-95
chr15:45540452-45541757	chr15	+	45540716	45541758	True	NM_138356,NM_004212	chr15,chr15	-,+	SHF,SLC28A2	-47343,2669
chr19:18510016-18510630	chr19	+	18510019	18510120	True	NM_145256,NR_036156	chr19,chr19	-,+	LRRC25,MIR3189	-1604,-12698
chr9:111927720-111929002	chr9	+	111927949	111928725	True	NM_014334,NM_017832	chr9,chr9	-,+	C9orf4,C9orf6	896,-231337
chr13:47063440-47065067	chr13	+	47063585	47065029	True	NM_001164211,NM_025113	chr13,chr13	+,-	LRCH1,C13orf18	62266,-101950
chr7:30182614-30183041	chr7	+	30182617	30183067	True	NM_017946,NM_152793	chr7,chr7	-,+	FKBP14,C7orf41	-116349,-8116
chr13:73631194-73632883	chr13	+	73631760	73632778	True	NM_001730,NM_014953	chr13,chr13	+,-	KLF5,DIS3	363,-275416
chr16:55689556-55689773	chr16	+	55689658	55689822	True	NM_001025194,NM_001172501,NM_001043,NM_001172504	chr16,chr16,chr16,chr16	-,+,+,+	CES1,SLC6A2,SLC6A2,SLC6A2	177303,-167,529,733
chr7:124569784-124570088	chr7	+	124569791	124570063	True	NR_003102,NR_003103,NM_001042594,NR_003104,NM_015450,NM_001174046	chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,+	POT1,POT1,POT1,POT1,POT1,SPAM1	24,24,24,24,24,-1003934
chr16:67565506-67565885	chr16	+	67565603	67565801	True	NM_001138,NM_001193524,NM_001193523,NM_001193522,NM_024519	chr16,chr16,chr16,chr16,chr16	-,+,+,+,+	AGRP,FAM65A,FAM65A,FAM65A,FAM65A	-47887,5563,-2114,-2934,-2937
chr20:3027540-3027892	chr20	+	3027541	3027752	True	NM_001501,NM_178331,NM_000490,NM_178332,NM_030811	chr20,chr20,chr20,chr20,chr20	+,+,-,+,+	GNRH2,GNRH2,AVP,GNRH2,MRPS26	-3324,-3324,37669,-3324,-917
chr6:33387757-33388224	chr6	+	33387839	33388273	True	NM_002636,NM_001014838,NM_006772,NM_001014433,NM_001014837,NM_001014840,NM_024165,NR_027692,NM_015921	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	+,-,+,-,-,-,+,+,-	PHF1,CUTA,SYNGAP1,CUTA,CUTA,CUTA,PHF1,PHF1,CUTA	-9117,-1774,-43,-1774,-1774,-1774,-9117,-9117,-1774
chr6:33387757-33388224	chr6_ssto_hap7	+	4868085	4868519	False	NM_002636,NM_001014838,NM_006772,NM_001014433,NM_001014837,NM_001014840,NM_024165,NR_027692	chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7	+,-,+,-,-,-,+,+	PHF1,CUTA,SYNGAP1,CUTA,CUTA,CUTA,PHF1,PHF1	-9115,-1774,-43,-1774,-1774,-1774,-9115,-9115
chr10:13278555-13279371	chr10	+	13278663	13279050	True	NM_145314,NM_182751	chr10,chr10	-,+	UCMA,MCM10	-2335,-75165
chr17:79877230-79878354	chr17	+	79877239	79878291	True	NM_016538,NR_015454,NM_002861,NM_002359,NM_001184917,NM_032711,NR_033682,NR_033683,NR_033681,NR_033685	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,-,-,-,-,-,-,-,-	SIRT7,LOC92659,PCYT2,MAFG,PCYT2,MAFG,PCYT2,PCYT2,PCYT2,PCYT2	-1181,7413,-7899,7347,-7899,3167,-7899,-8162,-7899,-8162
chr4:56502558-56502847	chr4	+	56502628	56502890	True	NR_003935,NM_006681	chr4,chr4	+,-	LOC644145,NMU	183346,-163
chr10:5437834-5439571	chr10	+	5438139	5439549	True	NM_001047160,NM_001171864,NM_024803	chr10,chr10,chr10	+,-,-	NET1,TUBAL3,TUBAL3	14968,7294,7294
chr11:3662062-3662480	chr11	+	3662311	3662517	True	NM_001079536,NM_053017,NM_004314	chr11,chr11,chr11	-,-,+	ART5,ART5,ART1	1079,1018,3843
chr22:45705230-45705522	chr22	+	45705244	45705472	True	NM_017911,NM_001009880,NM_001104595	chr22,chr22,chr22	+,-,+	FAM118A,KIAA0930,FAM118A	312,-68594,-214
chr11:74112921-74114497	chr11	+	74114268	74114340	True	NM_173582,NM_006591	chr11,chr11	-,+	PGM2L1,POLD3	-4766,189288
chr17:4476895-4477598	chr17	+	4476974	4477590	True	NM_198501,NM_153338	chr17,chr17	+,-	SMTNL2,GGT6	9685,-13098
chr5:165806677-165807915	chr5	+	165806684	165807330	True	NM_001122679,NR_029520	chr5,chr5	+,-	ODZ2,MIR103-1	904512,2180706
chr9:71649307-71649760	chr9	+	71649420	71649571	True	NM_001161706,NM_000144,NM_181425,NM_002732	chr9,chr9,chr9,chr9	+,+,+,-	FXN,FXN,FXN,PRKACG	907,907,907,-20381
chr2:10443954-10444154	chr2	+	10444004	10444117	True	NM_134421,NM_002149,NR_036222	chr2,chr2,chr2	+,+,-	HPCAL1,HPCAL1,MIR4261	-229,-1015,-111207
chr16:1360210-1361051	chr16	+	1360351	1361045	True	NM_194261,NM_194259,NM_001001410,NM_003345,NM_194260	chr16,chr16,chr16,chr16,chr16	+,+,-,+,+	UBE2I,UBE2I,C16orf42,UBE2I,UBE2I	-1227,-769,40878,-769,-1046
chr3:158298070-158299823	chr3	+	158298218	158299629	True	NM_001130157,NM_001130156,NM_020169,NM_001195433,NM_001195432,NM_022443,NM_001195434	chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,-,+,+,+,+	MLF1,MLF1,LXN,MLF1,MLF1,MLF1,MLF1	-9318,-9318,90904,-9318,-9318,-9318,-9318
chr7:128355236-128355674	chr7	+	128355273	128355715	True	NM_032599,NM_001708	chr7,chr7	+,-	FAM71F1,OPN1SW	29,60179
chr19:15132252-15132471	chr19	+	15132260	15132520	True	NM_173482,NM_005071	chr19,chr19	+,-	CCDC105,SLC1A6	-10772,-48530
chr14:24737603-24737945	chr14	+	24737699	24737785	True	NM_000359,NM_004581,NM_182836,NM_174913	chr14,chr14,chr14,chr14	-,-,-,+	TGM1,RABGGTA,RABGGTA,C14orf21	-5283,3008,3068,31312
chr17:18761806-18763098	chr17	+	18761954	18762974	True	NM_002767,NM_001039999	chr17,chr17	+,-	PRPSAP2,FAM83G	-523,145136
chr7:44612023-44612639	chr7	+	44612044	44612669	True	NM_182547,NM_001003941,NM_019082	chr7,chr7,chr7	-,+,-	TMED4,OGDH,DDX56	9209,33451,1519
chr12:133258020-133258872	chr12	+	133258178	133258493	True	NM_018663,NM_006231	chr12,chr12	+,-	PXMP2,POLE	5698,5509
chr2:158484857-158485147	chr2	+	158484890	158485168	True	NM_001111033,NM_001111032,NM_001135098,NM_145259	chr2,chr2,chr2,chr2	-,-,+,-	ACVR1C,ACVR1C,UPP2,ACVR1C	281,281,366522,281
chr15:99645539-99645809	chr15	+	99645582	99645858	True	NM_015286,NM_001167902,NM_145728	chr15,chr15,chr15	+,-,+	SYNM,PGPEP1L,SYNM	-347,-94558,-347
chr12:2988749-2990359	chr12	+	2988813	2990201	True	NR_027364,NR_027365,NM_202002,NR_027363,NM_202003,NM_001160408,NM_021953,NM_003324	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,-,+,-,+,-,+	C12orf32,C12orf32,FOXM1,C12orf32,FOXM1,TULP3,FOXM1,TULP3	-2506,-2506,-2510,-2506,-2510,9831,-2510,9831
chr9:133569262-133569527	chr9	+	133569342	133569576	True	NM_014285,NR_027440	chr9,chr9	+,-	EXOSC2,LOC100272217	-235,-114461
chr16:28856741-28857367	chr16	+	28856810	28857332	True	NM_003321,NM_001145795	chr16,chr16	-,+	TUFM,SH2B1	447,17745
chr13:61989473-61989857	chr13	+	61989588	61989872	True	NM_022843,NM_001146070	chr13,chr13	-,+	PCDH20,TDRD3	-13,-1018212
chr1:42921499-42921725	chr1	+	42921518	42921726	True	NM_032257,NM_001077447,NM_001146192,NM_024664	chr1,chr1,chr1,chr1	-,+,-,+	ZMYND12,PPCS,ZMYND12,PPCS	262,446,262,446
chr3:52719910-52720332	chr3	+	52719995	52720331	True	NR_003047,NM_018313,NM_018165,NR_003687,NM_181042,NM_014366,NR_003057,NM_206825,NM_206826	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,-,-,+,-,+,+,+,+	SNORD19,PBRM1,PBRM1,SNORD19B,PBRM1,GNL3,SNORD69,GNL3,GNL3	2924,-129,-6256,4422,-6256,-110,6420,-110,-110
chr19:56156540-56158116	chr19	+	56156676	56158165	True	NM_007279,NM_001012478,NM_016535,NM_016202,NM_013301,NM_001163423,NM_203374,NM_207115	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,+,-,+	U2AF2,U2AF2,ZNF581,ZNF580,CCDC106,ZNF580,ZNF784,ZNF580	7250,7250,-1741,-3309,788,-3264,-20735,-4335
chrX:19362449-19362699	chrX	+	19362471	19362651	True	NM_001173455,NM_001173454,NM_001173456,NM_000284,NM_001001671	chrX,chrX,chrX,chrX,chrX	+,+,+,+,-	PDHA1,PDHA1,PDHA1,PDHA1,MAP3K15	-511,-511,-511,-511,170778
chr16:2650802-2652066	chr16	+	2650869	2651995	True	NR_036139,NR_015441	chr16,chr16	-,+	MIR3178,LOC652276	-68863,1389
chr16:2650802-2652066	chr16	+	2729281	2729337	False	NM_031948,NM_018992	chr16,chr16	-,+	PRSS27,KCTD5	41271,3157
chr19:5869555-5869812	chr19	+	5869575	5869695	True	NM_002034,NM_001017921	chr19,chr19	-,+	FUT5,VMAC	912,35156
chr6:159469120-159470223	chr6	+	159469170	159470151	True	NM_054114,NM_152133,NM_138810,NM_032532	chr6,chr6,chr6,chr6	-,-,-,+	TAGAP,TAGAP,TAGAP,FNDC1	-2986,-2986,-2986,120277
chr20:271054-271881	chr20	+	271276	271758	True	NM_033089,NM_153269	chr20,chr20	+,-	ZCCHC3,C20orf96	6445,24
chr11:15779651-15780644	chr11	+	15779792	15780658	True	NM_001145819,NM_001042536	chr11,chr11	-,+	SOX6,INSC	643805,-643359
chr10:94335350-94336432	chr10	+	94335591	94336317	True	NM_004969,NM_004523	chr10,chr10	-,+	IDE,KIF11	-1739,16507
chr13:110958688-110958907	chr13	+	110958709	110958847	True	NM_001845,NM_001846	chr13,chr13	-,+	COL4A1,COL4A2	699,783
chr12:72665648-72666031	chr12	+	72665747	72666067	True	NR_026837,NR_026836,NM_013381	chr12,chr12,chr12	-,-,+	LOC283392,LOC283392,TRHDE	1272,1272,461
chr13:51416747-51417467	chr13	+	51416904	51417416	True	NM_198989,NM_024570	chr13,chr13	-,+	DLEU7,RNASEH2B	519,66397
chr2:43033864-43034089	chr2	+	43033940	43034139	True	NM_020744,NM_012205	chr2,chr2	+,-	MTA3,HAAO	-238320,-14189
chr11:57434785-57435080	chr11	+	57434873	57435059	True	NM_145008,NM_015457,NM_001142597,NM_006831	chr11,chr11,chr11,chr11	-,+,+,+	YPEL4,ZDHHC5,CLP1,CLP1	-17456,414,-9708,-9708
chr17:43859537-43860049	chr17_ctg5_hap1	-	1007524	1007981	False	NM_001145146,NM_001145147,NR_024559,NM_004382,NM_001145148	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	-,-,+,-,-	CRHR1,CRHR1,LOC100128977,CRHR1,CRHR1	-1641,-1641,-112881,-1641,-1641
chr17:43859537-43860049	chr17	+	43859550	43860004	True	NM_001145146,NM_001145147,NR_024559,NM_004382,NM_001145148	chr17,chr17,chr17,chr17,chr17	+,+,-,+,+	CRHR1,CRHR1,LOC100128977,CRHR1,CRHR1	1641,1641,112925,1641,1641
chr5:141993261-141993565	chr5	+	141993340	141993461	True	NM_001144892,NM_001135608,NM_033137	chr5,chr5,chr5	-,+,-	FGF1,ARHGAP26,FGF1	7497,156830,316
chr19:56187086-56187389	chr19	+	56187117	56187429	True	NM_001130072,NM_203374,NM_001130071,NM_013333	chr19,chr19,chr19,chr19	+,-,+,+	EPN1,ZNF784,EPN1,EPN1	-608,-51176,561,-608
chr16:67997230-67997815	chr16	+	67997359	67997861	True	NM_001145961,NM_001145962,NM_001145963,NM_001145964,NM_005072,NM_017803	chr16,chr16,chr16,chr16,chr16,chr16	-,-,-,-,-,+	SLC12A4,SLC12A4,SLC12A4,SLC12A4,SLC12A4,DUS2L	4786,4786,157,2970,4786,59342
chr1:219648742-219650734	chr1	+	219649104	219650764	True	NM_138794,NM_018713	chr1,chr1	+,-	LYPLAL1,SLC30A10	-301963,451279
chr11:120082950-120083291	chr11	+	120083095	120083213	True	NM_012101,NM_178507	chr11,chr11	-,+	TRIM29,OAF	-74232,-1399
chr15:42064547-42066202	chr15	+	42064842	42066230	True	NR_036195,NM_014994,NM_001128608	chr15,chr15,chr15	-,+,+	MIR4310,MAPKBP1,MAPKBP1	92569,401,401
chr17:54909600-54910517	chr17	+	54909681	54910461	True	NM_001085430,NM_003647	chr17,chr17	-,+	C17orf67,DGKE	-16431,998
chr17:43512967-43513711	chr17_ctg5_hap1	+	128028	128730	False	NM_001113738,NM_174919,NM_199282	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	+,-,-	ARL17A,ARHGAP27,ARHGAP27	66990,-2621,-9892
chr17:43512967-43513711	chr17	+	43512966	43513668	True	NR_024435,NM_174919,NM_199282	chr17,chr17,chr17	+,-,-	LOC100133991,ARHGAP27,ARHGAP27	-173459,-2684,-9954
chr5:40675368-40675921	chr5	+	40675589	40675965	True	NM_012382,NM_000958	chr5,chr5	-,+	TTC33,PTGER4	80157,4066
chr14:106938913-106939210	chr14	+	106939066	106939246	True	NR_002224	chr14	-	ADAM6	-500708
chr14:106938913-106939210	chr14	+	106858035	106858085	False	NR_002224,NR_027457	chr14,chr14	-,+	ADAM6,NCRNA00221	-419677,80369
chr7:2592823-2593368	chr7	+	2592991	2593233	True	NM_001100390,NM_152558,NM_152743	chr7,chr7,chr7	+,+,-	IQCE,IQCE,BRAT1	5398,5398,2213
chr6:49518836-49519140	chr6	+	49518889	49519107	True	NM_001145652,NM_000324	chr6,chr6	+,-	C6orf141,RHAG	-827,85530
chr5:72865481-72865917	chr5	+	72865481	72865543	True	NM_023039,NM_032175	chr5,chr5	-,+	ANKRA2,UTP15	-3970,-3938
chr10:26223423-26224019	chr10	+	26223636	26224053	True	NM_017433,NR_027333	chr10,chr10	+,-	MYO3A,LOC100128811	-685,-758431
chr5:142784392-142784695	chr5	+	142784415	142784739	True	NM_001024094,NM_001204261,NM_001204260,NM_001204263,NM_001204262,NM_001204265,NM_001204264,NM_000176,NM_021182,NM_001204258,NM_001204259,NM_001018076,NM_001020825	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,-,-,-,-,+,-,-,-,-	NR3C1,NR3C1,NR3C1,NR3C1,NR3C1,NR3C1,NR3C1,NR3C1,HMHB1,NR3C1,NR3C1,NR3C1,NR3C1	-1161,-1161,-1161,-1161,-1161,-1161,-1161,-1161,406986,-1161,-1161,-370,-1161
chrX:70365105-70365391	chrX	+	70365267	70365355	True	NM_001166660,NM_181303,NM_018977,NM_000206	chrX,chrX,chrX,chrX	+,+,+,-	NLGN3,NLGN3,NLGN3,IL2RG	-637,-637,-637,-33786
chr1:48687522-48687987	chr1	+	48687532	48688006	True	NR_026749,NM_001011547,NM_001135181	chr1,chr1,chr1	-,+,+	SKINTL,SLC5A9,SLC5A9	-39432,350,350
chr19:1942719-1942919	chr19	+	1942853	1942915	True	NR_033400,NM_001319	chr19,chr19	-,+	C19orf34,CSNK1G2	11683,-1743
chr19:1205405-1205620	chr19	+	1205413	1205653	True	NM_000455,NM_014963	chr19,chr19	+,-	STK11,SBNO2	144,-31131
chr11:14521349-14522874	chr11	+	14521526	14522713	True	NM_001144062,NM_016451,NM_001144061,NM_000922	chr11,chr11,chr11,chr11	-,-,-,+	COPB1,COPB1,COPB1,PDE3B	-111,-122,-85,142555
chr14:93534986-93535346	chr14	+	93535124	93535306	True	NM_001142594,NR_002808	chr14,chr14	-,+	ITPK1,ITPK1-AS1	47007,-1391
chr10:5062813-5063716	chr10	+	5062822	5063634	True	NM_001354,NM_205845,NM_001353	chr10,chr10,chr10	-,-,+	AKR1C2,AKR1C2,AKR1C1	-2615,-2615,-57421
chr10:5062813-5063716	chr10	-	4982872	4982922	False	NR_026743,NM_001353	chr10,chr10	-,+	tAKR,AKR1C1	-24407,22531
chr2:34271438-34273023	chr2	+	34271478	34273034	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-532598,-318194
chr19:40466744-40467304	chr19	+	40466831	40467144	True	NM_153001,NM_003890,NM_006503	chr19,chr19,chr19	+,-,+	PSMC4,FCGBP,PSMC4	9928,-26298,9928
chr9:138851691-138852347	chr9	+	138851833	138852119	True	NM_016172,NM_020822	chr9,chr9	-,+	UBAC1,KCNT1	1157,-257853
chr2:111142524-111143173	chr2	+	111142690	111143176	True	NR_037626,NR_027244	chr2,chr2	+,-	LOC100507334,LOC151009	-139526,-577
chr2:111142524-111143173	chr2	-	110743478	110744289	False	NR_037627,NR_036225	chr2,chr2	+,-	LOC100288570,MIR4267	-38270,83701
chr16:58329917-58330380	chr16	+	58329973	58330428	True	NM_014157,NM_001080492	chr16,chr16	+,-	CCDC113,PRSS54	-46192,-1022
chr1:150040212-150041609	chr1	+	150040495	150041373	True	NM_007259,NM_020205	chr1,chr1	+,-	VPS45,OTUD7B	-1213,-57809
chr22:22988908-22989245	chr22	+	22989185	22989293	True	NM_199127,NR_024591	chr22,chr22	+,-	GGTLC2,POM121L1P	-454,-2173
chr19:7587901-7588283	chr19	+	7587948	7588194	True	NM_018083,NM_080662,NM_020533	chr19,chr19,chr19	+,-,+	ZNF358,PEX11G,MCOLN1	-6995,-34043,-503
chr16:8762720-8763606	chr16	+	8762949	8763259	True	NM_020686,NM_015421	chr16,chr16	+,-	ABAT,TMEM186	5184,128296
chr16:22451303-22451814	chr16	+	22451491	22451583	True	NR_027154,NR_027460	chr16,chr16	+,-	LOC641298,RRN3P3	-3214,-2455
chr16:22451303-22451814	chr16	-	21510299	21510391	False	NM_001077180,NR_027155	chr16,chr16	+,-	METTL9,LOC100271836	100464,3262
chr16:22451303-22451814	chr16	-	21941801	21941893	False	NM_173806,NM_003366	chr16,chr16	-,+	PDZD9,UQCRC2	70589,22715
chr7:156932669-156933779	chr7	+	156932669	156933544	True	NM_005515,NM_014671	chr7,chr7	-,+	MNX1,UBE3C	-129322,-1074
chr7:44184939-44185422	chr7	+	44184990	44185334	True	NM_021223,NM_001129	chr7,chr7	-,+	MYL7,AEBP1	-4074,-41081
chr7:15741350-15741635	chr7	+	15741350	15741415	True	NM_001195280,NM_005924	chr7,chr7	+,-	LOC100506049,MEOX2	825089,-15042
chr4:83485622-83485934	chr4	+	83485666	83485842	True	NM_001080506,NM_021204	chr4,chr4	-,+	TMEM150C,ENOPH1	-2540,-133992
chrX:11658285-11659922	chrX	+	11658480	11659938	True	NM_078628,NM_013427	chrX,chrX	+,-	MSL3,ARHGAP6	116339,23934
chrX:106451016-106451479	chrX	+	106451151	106451342	True	NM_001169154,NM_017681,NM_173494,NR_033676	chrX,chrX,chrX,chrX	+,-,+,-	CXorf41,NUP62CL,CXorf41,NUP62CL	-1344,-1481,-1344,-1481
chr15:73359649-73359881	chr15	+	73359652	73359793	True	NM_002499,NR_023319	chr15,chr15	+,-	NEO1,ADPGK	-14883,-283526
chr8:41523278-41523991	chr8	+	41523344	41523926	True	NM_020478,NR_030161,NM_178819,NM_020480,NM_001142445	chr8,chr8,chr8,chr8,chr8	-,-,+,-,-	ANK1,MIR486,AGPAT6,ANK1,ANK1	-540,-5318,-87688,-540,-540
chr7:37960571-37960900	chr7	+	37960694	37960798	True	NM_003014,NM_017549	chr7,chr7	-,+	SFRP4,EPDR1	-4169,-582
chr1:152851990-152852776	chr1	+	152852069	152852738	True	NM_178351,NM_030663	chr1,chr1	-,+	LCE1C,SMCP	-72962,-1322
chr1:171248479-171249940	chr1	+	171248654	171249916	True	NM_002021,NR_031627	chr1,chr1	+,-	FMO1,MIR1295	-31042,-177707
chr15:63412458-63414051	chr15	+	63412488	63413959	True	NM_032857,NM_015920,NM_171846	chr15,chr15,chr15	+,-,+	LACTB,RPS27L,LACTB	39,35832,39
chr9:74670463-74672232	chr9	+	74670709	74671763	True	NM_004293,NM_001128618	chr9,chr9	+,-	GDA,C9orf57	92529,3808
chr3:53529275-53529510	chr3	+	53529359	53529469	True	NM_001128840,NM_001128839,NM_000720,NM_018403	chr3,chr3,chr3,chr3	+,+,+,-	CACNA1D,CACNA1D,CACNA1D,DCP1A	-379,-379,-379,-147705
chr7:148583261-148585097	chr7	+	148583482	148584987	True	NM_152998,NM_003592,NM_004456,NM_001203247,NM_001203248,NM_001203249	chr7,chr7,chr7,chr7,chr7,chr7	-,+,-,-,-,-	EZH2,CUL1,EZH2,EZH2,EZH2,EZH2	-2041,-187602,-2041,-2041,-2041,-2881
chr5:57756095-57756318	chr5	+	57756150	57756224	True	NM_006622,NM_152687	chr5,chr5	-,+	PLK2,GAPT	-237,31105
chr1:43204497-43205495	chr1	+	43204794	43205462	True	NM_024097,NM_001123395,NM_148960,NM_001185117	chr1,chr1,chr1,chr1	+,-,-,-	C1orf50,CLDN19,CLDN19,CLDN19	27453,513,513,513
chr6:53525731-53526137	chr6	+	53525841	53526161	True	NM_018214,NM_001003760	chr6,chr6	+,-	LRRC1,KLHL31	133616,4395
chr15:67004365-67004871	chr15	+	67004414	67004713	True	NM_005585,NM_001142861,NM_207338,NR_027654	chr15,chr15,chr15,chr15	+,+,-,+	SMAD6,SMAD6,LCTL,SMAD6	-9796,-3540,-146579,-9796
chr12:110315543-110317137	chr12	+	110315579	110317021	True	NM_016433,NM_001143852	chr12,chr12	-,+	GLTP,TCHP	1322,21057
chr2:101870881-101871811	chr2	+	101870887	101871519	True	NR_003070,NM_017546	chr2,chr2	-,+	SNORD89,C2orf29	18042,-1593
chr20:3802910-3804559	chr20	+	3803061	3804476	True	NM_001204447,NM_001204446,NM_001810,NM_018347	chr20,chr20,chr20,chr20	+,+,-,+	C20orf29,C20orf29,CENPB,C20orf29	-1947,-1947,-35724,-1947
chr3:100439492-100439747	chr3	+	100439633	100439725	True	NM_015429,NM_001195478	chr3,chr3	-,+	ABI3BP,TFG	272667,-11307
chr6:108146501-108147063	chr6	+	108146501	108146635	True	NM_018013,NM_198081	chr6,chr6	+,-	SOBP,SCML4	-335235,-980
chr19:10343590-10344165	chr19	+	10343792	10343902	True	NR_036206,NM_004230	chr19,chr19	+,-	MIR4322,S1PR2	-2754,-1844
chr3:49891478-49893197	chr3	+	49891815	49893221	True	NM_005879,NM_203370	chr3,chr3	-,+	TRAIP,C3orf54	821,-51184
chr6:160211066-160211324	chr6	+	160211126	160211373	True	NM_001008897,NM_030752,NR_002965,NR_002960,NM_173516,NM_014161	chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,-,+,+	TCP1,TCP1,SNORA29,SNORA20,PNLDC1,MRPL18	-391,-391,-4361,-9713,9927,118
chr1:147930463-147930917	chr1	+	147930510	147930966	True	NM_001097616,NR_027468	chr1,chr1	+,-	GPR89C,FLJ39739	-504994,1064
chr1:147930463-147930917	chr1	-	149577725	149577913	False	NM_001024599,NR_024510	chr1,chr1	-,+	HIST2H2BF,LOC728855	-178496,-1323
chr1:147930463-147930917	chr1	+	143742988	143743176	False	NR_033189,NR_027469,NR_027468	chr1,chr1,chr1	+,-,-	LOC100130000,LOC100286793,FLJ39739	-55909,1461,1331
chr1:147930463-147930917	chr1	+	144519651	144519749	False	NR_024584,NM_001037675	chr1,chr1	-,+	LOC728875,NBPF9	2270,95209
chr1:147930463-147930917	chr1	+	144339312	144339768	False	NR_024584,NM_001037675,NR_024510,NR_024511	chr1,chr1,chr1,chr1	-,+,-,-	LOC728875,NBPF9,LOC728855,LOC728855	2037,275190,1055,1055
chr16:30909030-30910069	chr16	+	30909918	30909984	True	NM_001330,NM_004765,NR_031576,NM_001142544	chr16,chr16,chr16,chr16	+,-,+,+	CTF1,BCL7C,MIR762,CTF1	-2048,-4519,-4752,-2048
chr10:18945388-18946701	chr10	+	18945476	18946317	True	NM_178815,NM_182543	chr10,chr10	+,-	ARL5B,NSUN6	1995,-4926
chr3:49757165-49757468	chr3	+	49757329	49757463	True	NM_013334,NM_198722,NM_021971,NM_022064	chr3,chr3,chr3,chr3	-,-,-,+	GMPPB,AMIGO3,GMPPB,RNF123	3971,-91,3971,-30391
chr16:3308116-3309960	chr16	+	3308129	3309623	True	NR_033904,NM_001198536,NM_000243	chr16,chr16,chr16	+,-,-	FLJ39639,MEFV,MEFV	4144,-1502,-1502
chr14:65880694-65881011	chr14	+	65880721	65880976	True	NM_178155,NM_178154,NR_024334,NM_004480,NM_178156	chr14,chr14,chr14,chr14,chr14	+,+,-,+,+	FUT8,FUT8,LOC645431,FUT8,FUT8	-2938,-1243,-1386,-1243,-2938
chr19:14691785-14692226	chr19	+	14691826	14692124	True	NM_004146,NM_207390,NM_001204118	chr19,chr19,chr19	-,+,+	NDUFB7,CLEC17A,CLEC17A	-8937,1771,1771
chr9:130702728-130704012	chr9	+	130702763	130703857	True	NM_001135219,NM_203305,NM_003863,NM_001006641	chr9,chr9,chr9,chr9	-,-,-,+	PIP5KL1,FAM102A,DPM2,SLC25A25	-9687,9189,-2000,126621
chr6:117992890-117993896	chr6	+	117993222	117993938	True	NM_020399,NM_138459	chr6,chr6	-,+	GOPC,NUS1	-69517,2678
chr14:92328483-92329161	chr14	+	92328710	92329133	True	NM_001128596,NM_017437	chr14,chr14	-,+	TC2N,CPSF2	4798,259164
chr4:141490600-141492342	chr4	+	141490651	141492398	True	NM_021833,NM_153702	chr4,chr4	-,+	UCP1,ELMOD2	-692,-45396
chr2:677758-679213	chr2	+	677875	679261	True	NM_018968,NM_152834	chr2,chr2	+,-	SNTG2,TMEM18	267292,-436
chr8:37410441-37410683	chr8	+	37410527	37410715	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	142585,194901
chr12:56625089-56625668	chr12	+	56625158	56625517	True	NM_005785,NM_173596,NM_194359,NM_194358,NM_001135195,NM_024068	chr12,chr12,chr12,chr12,chr12,chr12	-,+,-,-,+,+	RNF41,SLC39A5,RNF41,RNF41,SLC39A5,OBFC2B	-9454,-1389,-9423,-9454,-708,-7084
chr16:23310471-23312016	chr16	+	23310669	23311816	True	NM_020718,NM_000336	chr16,chr16	-,+	USP31,SCNN1B	-150078,1774
chr19:4535444-4536149	chr19	+	4535447	4535576	True	NM_052972,NM_032631,NM_001013706	chr19,chr19,chr19	-,+,-	LRG1,HDGFRP2,PLIN5	4521,-63243,-239
chr9:15423616-15423955	chr9	+	15423775	15423969	True	NM_021144,NM_001039697	chr9,chr9	-,+	PSIP1,SNAPC3	86368,-1044
chr12:69878157-69879421	chr12	+	69878173	69878753	True	NM_006654,NR_037475	chr12,chr12	+,-	FRS2,MIR3913-1	-14096,99900
chr12:52216112-52216318	chr12	+	52216171	52216313	True	NM_001130015,NM_001013690	chr12,chr12	+,-	ANKRD33,FIGNL2	65479,9438
chr9:123344802-123346117	chr9	+	123344843	123345753	True	NR_027442,NM_018249,NM_001011649	chr9,chr9,chr9	+,-,-	LOC100288842,CDK5RAP2,CDK5RAP2	210021,-2406,-2406
chr18:74844890-74845152	chr18	+	74844981	74845049	True	NM_001480,NM_001025101,NM_001025100	chr18,chr18,chr18	+,-,-	GALR1,MBP,MBP	116958,-207,-207
chr2:95692113-95692314	chr2	+	95692135	95692205	True	NR_037597,NM_022440,NM_022438,NM_002371,NM_022439	chr2,chr2,chr2,chr2,chr2	-,+,+,+,+	LOC442028,MAL,MAL,MAL,MAL	-79048,-710,-710,-710,-710
chr13:46287393-46287717	chr13	+	46287415	46287759	True	NM_182542,NM_152719	chr13,chr13	-,+	FAM194B,SPERT	-97541,-11020
chr17:41157300-41157654	chr17	+	41157528	41157596	True	NM_006373,NM_000988,NM_005533	chr17,chr17,chr17	-,+,+	VAT1,RPL27,IFI35	16913,-7133,1145
chr17:1422471-1422806	chr17	+	1422511	1422845	True	NM_130766,NM_016532,NM_001135642,NR_028514	chr17,chr17,chr17,chr17	-,-,-,+	INPP5K,INPP5K,INPP5K,LOC100306951	-2329,-2329,-2329,-2349
chr17:35653386-35653797	chr17	+	35653576	35653655	True	NM_198837,NM_198838,NM_173625	chr17,chr17,chr17	-,-,+	ACACA,ACACA,C17orf78	3096,3096,79329
chr2:74902362-74902994	chr2	+	74902415	74902933	True	NM_138804,NM_004263	chr2,chr2	-,+	C2orf65,SEMA4F	-27251,-21073
chr17:29061443-29062489	chr17	+	29061489	29062304	True	NM_015986,NR_024187	chr17,chr17	-,+	CRLF3,SUZ12P	89534,-24927
chr17:29061443-29062489	chr17	+	30267438	30267498	False	NM_018428,NM_015355	chr17,chr17	-,+	UTP6,SUZ12	-38709,-3455
chrX:1656521-1657274	chrY	+	1606525	1606765	False	NM_178129,NR_027383	chrY,chrY	-,+	P2RY8,AKAP17A	-488,53720
chrX:1656521-1657274	chrX	+	1656525	1656765	True	NM_178129,NR_027383	chrX,chrX	-,+	P2RY8,AKAP17A	-488,53720
chr1:118499795-118501622	chr1	+	118499852	118501586	True	NM_001135589,NM_006784	chr1,chr1	-,+	GDAP2,WDR3	-27550,-27531
chr7:140105179-140105762	chr7	+	140105364	140105771	True	NM_001008749,NM_032295,NM_207113	chr7,chr7,chr7	+,-,-	RAB19,SLC37A3,SLC37A3	-1572,-7053,-7053
chr6:111305086-111305763	chr6	+	111305277	111305532	True	NM_032194,NR_002932	chr6,chr6	+,-	RPF2,GSTM2P1	-2046,63286
chrX:23018976-23019909	chrX	+	23019077	23019866	True	NM_182699,NM_001033583	chrX,chrX	+,-	DDX53,ACOT9	-1041,741592
chr19:16827270-16828418	chr19	+	16827324	16828291	True	NM_001007525,NM_024104	chr19,chr19	+,-	NWD1,C19orf42	2495,-56356
chr12:100672498-100672908	chr12	+	100672693	100672887	True	NM_017988,NM_152317	chr12,chr12	+,-	SCYL2,DEPDC4	-11202,-11836
chr6:108487982-108488597	chr6	+	108488118	108488582	True	NM_003269,NM_014028	chr6,chr6	+,-	NR2E1,OSTM1	-954,-92177
chr22:32594796-32595217	chr22	+	32594831	32595255	True	NM_006605,NR_033411,NM_001098527,NM_001159546,NM_001159545	chr22,chr22,chr22,chr22,chr22	-,+,-,-,-	RFPL2,SLC5A1,RFPL2,RFPL2,RFPL2	-5365,-139725,4259,3332,5513
chr1:201797290-201797720	chr1	+	201797501	201797723	True	NM_012134,NM_018085	chr1,chr1	-,+	LMOD1,IPO9	118043,564
chr5:14663712-14664050	chr5	+	14663755	14663937	True	NM_138348,NR_037899	chr5,chr5	+,-	FAM105B,LOC100128508	845,113254
chr11:65838646-65840521	chr11	+	65838693	65840559	True	NM_033036,NM_018026	chr11,chr11	-,+	GAL3ST3,PACS1	-22042,-920
chr3:197808500-197808731	chr3	+	197808546	197808614	True	NM_001145248	chr3	+	FAM157A	70622
chr9:137534572-137534943	chr9	+	137534773	137534931	True	NR_037469,NM_000093	chr9,chr9	-,+	MIR3689B,COL5A1	207237,-1172
chr1:35219502-35220654	chr1	+	35219546	35220290	True	NM_001164824,NM_153212,NM_005268	chr1,chr1,chr1	-,+,+	C1orf212,GJB4,GJB5	104406,5051,430
chr3:170136703-170137076	chr3	+	170136732	170137124	True	NM_005602,NM_020949,NM_001185056	chr3,chr3,chr3	+,-,+	CLDN11,SLC7A14,CLDN11	-130,166789,1903
chr17:17207285-17208442	chr17	+	17207321	17208470	True	NM_003653,NM_020201	chr17,chr17	-,+	COPS3,NT5M	-22704,-698
chr11:8708070-8709334	chr11	+	8708069	8709178	True	NM_014818,NR_002580,NM_000990,NR_002977	chr11,chr11,chr11,chr11	-,+,+,+	TRIM66,SNORA3,RPL27A,SNORA45	-27686,-2348,-4127,-1136
chr19:7583563-7584239	chr19	+	7583988	7584272	True	NM_018083,NM_080662,NM_020533	chr19,chr19,chr19	+,-,+	ZNF358,PEX11G,MCOLN1	-3035,-30083,3223
chr3:107809796-107810022	chr3	+	107809808	107809920	True	NM_198793,NR_015394,NM_001777	chr3,chr3,chr3	-,+,-	CD47,LOC285205,CD47	65,-207807,65
chr16:3997692-3999450	chr16	+	3998327	3999094	True	NM_005223,NM_004380	chr16,chr16	+,-	DNASE1,CREBBP	-295449,-68206
chr15:57667807-57668420	chr15	+	57667909	57668374	True	NM_032866,NR_015419	chr15,chr15	+,-	CGNL1,LOC145783	330,-457212
chr9:130692596-130692881	chr9	+	130692595	130692805	True	NM_001135219,NM_001018078,NM_173492,NM_003863	chr9,chr9,chr9,chr9	-,+,-,-	PIP5KL1,FPGS,PIP5KL1,DPM2	321,-127138,-2825,8008
chr5:158896995-158898730	chr5	+	158897190	158898579	True	NR_037889,NR_027110	chr5,chr5	+,-	LOC285626,LOC285627	-138715,-3906
chr2:172069087-172070054	chr2	+	172069102	172069702	True	NM_001136554,NM_001164821	chr2,chr2	-,+	TLK1,DCAF17	18172,221058
chr19:40195472-40196284	chr19	+	40195811	40196205	True	NM_020129,NM_203471,NM_001828	chr19,chr19,chr19	+,+,-	LGALS14,LGALS14,CLC	-930,-930,32513
chr1:114447958-114448264	chr1	+	114447971	114448295	True	NM_022836,NM_006594	chr1,chr1	+,-	DCLRE1B,AP4B1	-107,-230
chr19:14377518-14377818	chr19	+	14377580	14377772	True	NM_014921,NM_001025160	chr19,chr19	-,+	LPHN1,CD97	-60583,114440
chr15:98513942-98514577	chr15	+	98514027	98514623	True	NM_183376,NR_024173	chr15,chr15	+,-	ARRDC4,LOC91948	-10155,-96368
chr4:57775768-57777035	chr4	+	57775863	57776913	True	NM_032313,NM_001193508,NM_005612	chr4,chr4,chr4	-,+,+	C4orf14,REST,REST	66963,-843,-1880
chr19:54760499-54760760	chr19	+	54760499	54760751	True	NM_001013,NM_001081442,NM_001081443,NM_006840	chr19,chr19,chr19,chr19	+,-,-,-	RPS9,LILRB5,LILRB5,LILRB5	-55824,466,466,466
chr1:39350399-39351060	chr1	+	39350873	39351109	True	NR_037633,NR_037637,NR_037636,NR_037635,NR_037634,NM_030772,NM_001136275	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,-,+	GJA9-MYCBP,GJA9-MYCBP,GJA9-MYCBP,GJA9-MYCBP,GJA9-MYCBP,GJA9,AKIRIN1	-3575,-3575,-3575,-3575,-3575,-3575,105806
chr3:99592594-99594550	chr3	+	99592836	99594558	True	NM_014890,NM_032359	chr3,chr3	-,+	FILIP1L,C3orf26	538,-56216
chr19:45055352-45056873	chr19	+	45055440	45056785	True	NM_001205280,NR_027754	chr19,chr19	+,-	LOC147710,CEACAM22P	60154,3415
chr1:104067120-104067540	chr1	+	104067206	104067481	True	NM_001008218,NM_017619	chr1,chr1	-,+	AMY1B,RNPC3	171459,1096
chr5:153418040-153418360	chr5	+	153418094	153418292	True	NM_005927,NM_001135037,NR_024152,NM_018691	chr5,chr5,chr5,chr5	+,+,+,-	MFAP3,MFAP3,MFAP3,FAM114A2	226,226,226,255
chr19:13104378-13105388	chr19	+	13104426	13105208	True	NM_002501,NM_052850	chr19,chr19	+,-	NFIX,GADD45GIP1	1375,-36376
chr8:74661437-74662318	chr8	+	74661743	74662230	True	NM_001164381,NM_001164380,NM_001164383,NM_001164382,NM_001164385,NM_001164384,NM_001040613,NM_014393	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,-,-,+,-	STAU2,STAU2,STAU2,STAU2,STAU2,STAU2,TMEM70,STAU2	-2581,-2581,-2581,-2581,-2581,-1800,226146,-2581
chr15:64995215-64995422	chr15	+	64995216	64995392	True	NM_001195059,NM_002537	chr15,chr15	+,-	PLEKHO2,OAZ2	138689,120
chr2:68051941-68052314	chr2	+	68051941	68052351	True	NM_001190263,NM_020143	chr2,chr2	-,+	C1D,PNO1	237859,332653
chr12:56623440-56625089	chr12	+	56623574	56624648	True	NM_005785,NM_173596,NM_194359,NM_194358,NM_001135195,NM_024068	chr12,chr12,chr12,chr12,chr12,chr12	-,+,-,-,+,+	RNF41,SLC39A5,RNF41,RNF41,SLC39A5,OBFC2B	-7870,-174,-7839,-7870,22,-5507
chr11:12983335-12983853	chr11	+	12983339	12983584	True	NM_001080521,NM_032320	chr11,chr11	+,-	RASSF10,BTBD10	47385,501311
chr13:36704494-36704814	chr13	+	36704515	36704769	True	NM_001111046,NM_004734	chr13,chr13	+,-	CCNA1,DCLK1	301197,795
chr22:24322309-24322897	chr22	+	24322467	24322835	True	NM_001355,NM_000854,NM_001084392	chr22,chr22,chr22	-,+,-	DDT,GSTT2,DDT	-448,-204,-5787
chr22:24322309-24322897	chr22	-	24302871	24303239	False	NM_000854,NM_001080843,NM_001084393	chr22,chr22,chr22	-,-,+	GSTT2,GSTT2B,DDTL	204,179,5786
chr3:12884011-12885702	chr3	+	12884364	12885739	True	NM_001007073,NM_012298,NR_002582,NM_000994,NM_001007074	chr3,chr3,chr3,chr3,chr3	-,+,-,-,-	RPL32,CAND2,SNORA7A,RPL32,RPL32	-1283,-46245,-2415,-1283,-2415
chr22:38092483-38093063	chr22	+	38092645	38093045	True	NM_006498,NM_001039141	chr22,chr22	-,+	LGALS2,TRIOBP	-116621,43
chr11:93868350-93869666	chr11	+	93868422	93869638	True	NM_015368,NM_016540	chr11,chr11	+,-	PANX1,GPR83	-6379,265005
chr16:8720714-8722187	chr16	+	8721028	8722197	True	NM_001146336,NM_024109	chr16,chr16	-,+	TMEM114,METTL22	-98802,-5552
chr15:25414722-25415311	chr15	+	25414751	25415350	True	NR_003304,NM_130838,NR_003301,NR_001291,NR_003302,NR_003296,NR_003297,NR_003294,NR_003295	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,-,+,+,+,+,+,+,+	SNORD115-12,UBE3A,SNORD115-9,SNORD115-1,SNORD115-10,SNORD115-4,SNORD115-5,SNORD115-2,SNORD115-3	8537,235353,8537,519,8537,6628,8534,2431,4723
chrX:39644527-39645230	chrX	+	39644526	39645146	True	NM_005765,NM_001123385	chrX,chrX	+,-	ATP6AP2,BCOR	795069,311623
chr5:140502018-140502700	chr5	+	140502022	140502712	True	NM_031947,NM_018938	chr5,chr5	-,+	SLC25A2,PCDHB4	180950,-492
chrX:102966334-102967420	chrX	+	102966531	102967421	True	NM_001024452,NM_182541	chrX,chrX	-,+	GLRA4,TMEM31	16181,-745
chr1:25071103-25071607	chr1	+	25071216	25071370	True	NM_013943,NM_004350	chr1,chr1	+,-	CLIC4,RUNX3	389,185450
chr5:148649008-148649246	chr5	+	148649110	148649252	True	NM_001146337,NM_152406,NM_014443	chr5,chr5,chr5	+,+,-	AFAP1L1,AFAP1L1,IL17B	2148,2148,109636
chr7:6773369-6773892	chr7	+	6773771	6773840	True	NR_002217,NM_016265	chr7,chr7	+,-	PMS2CL,ZNF12	1095,-27205
chr2:33746998-33748260	chr2	+	33747089	33748236	True	NM_015376,NM_015475	chr2,chr2	+,-	RASGRP3,FAM98A	-8198,76185
chr21:30257764-30258640	chr21	+	30257805	30258367	True	NM_013240,NM_001001992,NM_182749	chr21,chr21,chr21	-,+,-	N6AMT1,USP16,N6AMT1	-112,138570,-112
chr2:209147518-209149278	chr2	+	209147727	209148131	True	NM_015040,NM_005896	chr2,chr2	+,-	PIKFYVE,IDH1	-16787,-27921
chr3:15536753-15537376	chr3	+	15536863	15537345	True	NM_033083,NM_080538,NR_036232	chr3,chr3,chr3	+,-,-	EAF1,COLQ,MIR4270	-67862,3084,520
chrX:7810518-7810798	chrX	+	7810716	7810786	True	NM_013452,NM_004650	chrX,chrX	+,-	VCX,PNPLA4	-464,84739
chr19:13873702-13873920	chr19	+	13873829	13873939	True	NR_036515,NM_001031727,NM_032285	chr19,chr19,chr19	-,+,+	LOC284454,MRI1,MRI1	73214,1397,1397
chr5:79594131-79595162	chr5	+	79594603	79595022	True	NM_032567,NR_004845	chr5,chr5	+,-	SPZ1,LOC644936	20767,1325
chr16:71841257-71841959	chr16	+	71841464	71842006	True	NM_001128,NM_001137675,NM_001030007	chr16,chr16,chr16	-,+,-	AP1G1,ATXN1L,AP1G1	1020,37892,1020
chr15:89016947-89017510	chr15	+	89017000	89017519	True	NM_022163,NM_022839,NM_176805	chr15,chr15,chr15	-,+,+	MRPL46,MRPS11,MRPS11	-6367,-6367,-6367
chr1:13181741-13183680	chr1	+	13181793	13183669	True	NM_001100631,NM_001136561	chr1,chr1	+,-	PRAMEF22,LOC440563	-146301,707
chrX:14571279-14571723	chrX	+	14571299	14571708	True	NM_001018113,NM_002063	chrX,chrX	-,+	FANCB,GLRA2	319527,-23937
chr2:48540669-48541342	chr2	+	48540757	48541280	True	NM_001190274,NM_002158	chr2,chr2	-,+	FBXO11,FOXN2	-407825,514
chr2:7053391-7054259	chr2	+	7053432	7054280	True	NR_033997,NM_014746	chr2,chr2	-,+	LOC386597,RNF144A	4583,3242
chr5:168043616-168045128	chr5	+	168044358	168044934	True	NM_024594,NR_031721	chr5,chr5	-,+	PANK3,MIR103-1AS	-37744,-56500
chr5:6631339-6632739	chr5	+	6631383	6632663	True	NM_017755,NR_037947,NM_001193455,NM_001047	chr5,chr5,chr5,chr5	-,-,-,+	NSUN2,NSUN2,NSUN2,SRD5A1	860,860,860,836
chr1:173011855-173012803	chr1	+	173011858	173012840	True	NM_005092,NM_000639	chr1,chr1	-,+	TNFSF18,FASLG	7313,-383732
chr2:3381515-3381721	chr2	+	3381605	3381683	True	NM_016030,NM_003310	chr2,chr2	+,-	TTC15,TSSC1	1762,20
chr6:158733327-158734258	chr6	+	158733341	158734161	True	NM_001007466,NM_020245,NM_032861	chr6,chr6,chr6	+,+,-	TULP4,TULP4,SERAC1	53,53,-144029
chr1:23695006-23695454	chr1	+	23695082	23695264	True	NR_033691,NR_033690,NM_001077195,NM_030634	chr1,chr1,chr1,chr1	+,+,-,-	C1orf213,C1orf213,ZNF436,ZNF436	446,199,1143,-203
chr4:188891600-188892963	chr4	+	188891954	188892806	True	NM_173553,NM_174900	chr4,chr4	-,+	TRIML2,ZFP42	133652,24118
chr3:135110918-135111252	chr3	+	135110991	135111279	True	NM_178554,NM_001190447	chr3,chr3	-,+	KY,PPP2R3A	-741127,573235
chr16:30417920-30418592	chr16	+	30418189	30418497	True	NM_024096,NM_001142305,NM_016643	chr16,chr16,chr16	-,+,+	DCTPP1,ZNF771,ZNF771	22926,237,237
chr3:57742055-57742356	chr3	+	57742082	57742318	True	NM_007159,NM_152678	chr3,chr3	+,-	SLMAP,FAM116A	855,-63266
chr17:6906633-6908616	chr17	+	6906635	6908392	True	NM_174893,NM_001004333,NM_000697,NM_001142798,NM_001142799,NR_037715,NR_037716,NR_037717,NR_029712	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,+,+,+,-	C17orf49,RNASEK,ALOX12,C17orf49,C17orf49,RNASEK,RNASEK,RNASEK-C17ORF49,MIR195	9663,7343,-7310,9663,9663,7343,7343,7343,12679
chr16:69386440-69386880	chr16	+	69386571	69386811	True	NM_016101,NM_144676	chr16,chr16	+,-	NIP7,TMED6	-13207,-859
chr12:132200709-132202366	chr12	+	132200718	132201871	True	NM_175066,NM_004592	chr12,chr12	-,+	DDX51,SFSWAP	427070,-5134
chr10:124216816-124217542	chr10	+	124216877	124217498	True	NM_001099667,NM_001010912,NM_002775	chr10,chr10,chr10	+,-,+	ARMS2,C10orf120,HTRA1	-2749,241897,3542
chr12:120873655-120873969	chr12	+	120873710	120873980	True	NM_016399,NM_004373	chr12,chr12	-,+	TRIAP1,COX6A1	10285,1923
chr22:46402777-46403009	chr22	+	46402799	46403041	True	NM_058238,NR_027240	chr22,chr22	-,+	WNT7B,LOC730668	-29791,-354
chr12:133716931-133718728	chr12	+	133717186	133718448	True	NM_015394,NM_001191054	chr12,chr12	+,-	ZNF10,LOC647589	-10023,94024
chr6:119669199-119669592	chr6	+	119669204	119669587	True	NM_005907,NM_014034	chr6,chr6	-,+	MAN1A1,ASF1A	1390,-454014
chr19:50646754-50647151	chr19	+	50646902	50647084	True	NM_001145809,NR_024243,NR_024231,NR_024230	chr19,chr19,chr19,chr19	+,-,-,-	MYH14,SNAR-D,SNAR-B1,SNAR-B2	59800,-3325,-4408,-4408
chr17:11784570-11784945	chr17	+	11784574	11784946	True	NM_004662,NM_144680	chr17,chr17	+,-	DNAH9,ZNF18	1272,115793
chr2:88049302-88050089	chr6	+	161125195	161125246	True	NM_000301,NM_001168338,NM_005577	chr6,chr6,chr6	+,+,-	PLG,PLG,LPA	-2022,-2022,-37788
chr2:88049302-88050089	chr2	+	88049534	88050129	False	NM_001032392,NM_001078170,NM_002665	chr2,chr2,chr2	+,-,+	PLGLB1,RGPD2,PLGLB2	-1976,75207,-1980
chr1:230986120-230986725	chr1	+	230986124	230986702	True	NM_016452,NM_001136495	chr1,chr1	+,-	CAPN9,C1orf198	-103014,5130
chr11:118878052-118878958	chr11	+	118878534	118878688	True	NM_198489,NR_003040	chr11,chr11	+,-	CCDC84,RPL23AP64	-9735,-4231
chr11:2908985-2909543	chr11	+	2909121	2909582	True	NM_183233,NM_000076,NM_001122631,NM_001122630	chr11,chr11,chr11,chr11	+,-,-,-	SLC22A18,CDKN1C,CDKN1C,CDKN1C	11368,-2126,-2126,-2126
chr15:83775374-83775835	chr15	+	83775408	83775837	True	NM_001144903,NM_023003,NM_025238	chr15,chr15,chr15	+,+,-	TM6SF1,TM6SF1,BTBD1	486,486,-39302
chr11:63331530-63331819	chr11	+	63331568	63331846	True	NM_017878,NM_004585	chr11,chr11	-,+	HRASLS2,RARRES3	-713,-27346
chr1:96911715-96913532	chr1	+	96912148	96913568	True	NM_021190,NM_144988	chr1,chr1	+,-	PTBP2,ALG14	273606,-1373641
chr3:123170196-123170666	chr3	+	123170199	123170418	True	NM_012430,NM_183357	chr3,chr3	+,-	SEC22A,ADCY5	-249476,-2807
chr19:5838312-5838651	chr19	+	5838398	5838658	True	NM_001040701,NM_000150,NM_004558	chr19,chr19,chr19	-,-,+	FUT6,FUT6,NRTN	1134,1134,-14631
chr6:26020546-26020807	chr6	+	26020550	26020756	True	NM_005325,NM_003544,NM_003529,NM_003538	chr6,chr6,chr6,chr6	-,-,+,+	HIST1H1A,HIST1H4B,HIST1H3A,HIST1H4A	-2510,6774,5,1150
chr8:60032154-60032379	chr8	+	60032181	60032285	True	NM_005625,NM_014729	chr8,chr8	+,-	SDCBP,TOX	-566504,-414
chr9:114659749-114660228	chr9	+	114659833	114660174	True	NM_003358,NM_173521	chr9,chr9	+,-	UGCG,C9orf84	-678,-114054
chr9:15301676-15302215	chr9	+	15301831	15301928	True	NM_001168341,NM_001168340,NM_001039697,NM_001168339,NM_152574	chr9,chr9,chr9,chr9,chr9	-,-,+,-,-	TTC39B,TTC39B,SNAPC3,TTC39B,TTC39B	5487,5487,120853,5487,5487
chr14:65383588-65385265	chr14	+	65383804	65385262	True	NM_001202559,NM_001202558,NM_002083,NM_001204063,NM_001204064,NM_145165	chr14,chr14,chr14,chr14,chr14,chr14	+,+,-,+,+,+	CHURC1-FNTB,CHURC1-FNTB,GPX2,CHURC1,CHURC1,CHURC1	-2776,-2776,24319,-2776,-2776,-2776
chr5:133304396-133304893	chr5	+	133304463	133304911	True	NM_003202,NM_020199	chr5,chr5	+,-	TCF7,C5orf15	145490,-57
chr17:30185808-30186010	chr17	+	30185813	30185999	True	NM_018405,NM_015355	chr17,chr17	-,+	C17orf79,SUZ12	377,78044
chr6:26015841-26017043	chr6	+	26016144	26017044	True	NM_005325,NM_003529,NM_003538	chr6,chr6,chr6	-,+,+	HIST1H1A,HIST1H3A,HIST1H4A	1046,3673,4862
chr1:78225647-78226771	chr1	+	78225652	78226784	True	NM_015017,NM_201626,NM_198549,NM_201624	chr1,chr1,chr1,chr1	-,-,+,-	USP33,USP33,FAM73A,USP33	-115,-115,18524,-115
chr17:33570369-33570785	chr17	+	33570555	33570817	True	NM_152462,NM_144975	chr17,chr17	-,+	AMAC1,SLFN5	-49143,-520
chr5:72469394-72470205	chr5	+	72469594	72470244	True	NM_004472,NM_153217	chr5,chr5	-,+	FOXD1,TMEM174	274158,-622
chr17:48071282-48071816	chr17	+	48071498	48071778	True	NM_005220,NM_001934	chr17,chr17	-,+	DLX3,DLX4	860,-21419
chr10:123353652-123355266	chr10	+	123353802	123355248	True	NM_000141,NM_022970,NM_001144916,NM_001144917,NM_001144914,NM_001144915,NM_206861,NM_001144913,NM_001144918,NM_001144919	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,-,-,+,-,-,-	FGFR2,FGFR2,FGFR2,FGFR2,FGFR2,FGFR2,TACC2,FGFR2,FGFR2,FGFR2	2774,2774,-30,2774,-321,961,393440,-321,2774,2774
chr11:67182772-67183038	chr11	+	67182828	67182908	True	NM_001166222,NM_020811,NM_206873	chr11,chr11,chr11	+,+,-	CARNS1,CARNS1,PPP1CA	240,240,-13452
chr3:172430752-172431937	chr3	+	172430951	172431926	True	NM_001146278,NM_020792,NM_018098,NM_001146277,NM_001146276	chr3,chr3,chr3,chr3,chr3	-,-,+,-,-	NCEH1,NCEH1,ECT2,NCEH1,NCEH1	-1943,-1943,40371,-1943,-1943
chr12:44225639-44226299	chr12	+	44225704	44226314	True	NM_002822,NM_032256	chr12,chr12	-,+	TWF1,TMEM117	-25526,3647
chr19:477907-478293	chr19	+	477958	478334	True	NM_182577,NM_130760	chr19,chr19	-,+	ODF3L2,MADCAM1	-2975,18155
chr20:62497973-62498465	chr20	+	62498253	62498394	True	NM_080622,NM_025224,NM_199359,NM_003288,NM_199363,NM_199362,NM_199361,NM_199360	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,-,+,+,+,+,+,+	ABHD16B,ZBTB46,TPD52L2,TPD52L2,TPD52L2,TPD52L2,TPD52L2,TPD52L2	-5738,-61397,-1714,-1714,-1714,-1714,-1714,-1714
chr1:155292066-155292482	chr1	+	155292070	155292462	True	NM_001105205,NM_001105204,NM_014328,NM_001039517,NM_001105203	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	RUSC1,RUSC1,RUSC1,C1orf104,RUSC1	1265,-1481,1755,1526,-1481
chr9:101866105-101867083	chr9	+	101866128	101867059	True	NM_004612,NM_001130916,NM_033087	chr9,chr9,chr9	+,+,-	TGFBR1,TGFBR1,ALG2	352,352,117237
chr11:61160667-61161931	chr11	+	61160732	61161816	True	NM_001173990,NM_001173991,NM_153611,NM_016499	chr11,chr11,chr11,chr11	+,+,-,+	TMEM216,TMEM216,CYBASC3,TMEM216	-951,-951,-30977,-918
chr1:12123306-12123570	chr1	+	12123318	12123524	True	NM_001243,NM_138346	chr1,chr1	+,-	TNFRSF8,KIAA2013	-8,-136833
chr22:46082261-46082553	chr22	+	46082280	46082408	True	NM_013236,NM_148674	chr22,chr22	+,-	ATXN10,SMC1B	-14666,-272780
chr22:47133044-47133319	chr22	+	47133254	47133328	True	NM_022766,NM_014346	chr22,chr22	-,+	CERK,TBC1D22A	874,25189
chr19:51871561-51871847	chr19	+	51871715	51871791	True	NM_001985,NM_152353,NR_033235,NM_005601	chr19,chr19,chr19,chr19	-,-,+,-	ETFB,CLDND2,LOC100129083,NKG7	-2043,516,47368,4219
chr3:172851843-172852201	chr3	+	172851842	172852001	True	NM_014932,NM_031955	chr3,chr3	+,-	NLGN1,SPATA16	264242,7118
chr12:49731187-49731596	chr12	+	49731193	49731462	True	NM_001008223,NM_024902	chr12,chr12	-,+	C1QL4,DNAJC22	-222,9578
chr20:3064278-3064517	chr20	+	3064498	3064562	True	NM_000490,NM_000915	chr20,chr20	-,+	AVP,OXT	858,-12283
chr1:112280883-112281234	chr1	+	112280930	112280998	True	NM_019099,NM_007204	chr1,chr1	-,+	C1orf183,DDX20	1098,17191
chr10:115437144-115438882	chr10	+	115437426	115438882	True	NM_198060,NM_001227,NM_033339,NM_033340,NM_033338	chr10,chr10,chr10,chr10,chr10	-,+,+,+,+	NRAP,CASP7,CASP7,CASP7,CASP7	-13621,543,543,52,543
chr2:73518529-73518744	chr2	+	73518570	73518778	True	NM_001965,NR_029403	chr2,chr2	-,+	EGR4,CCT7	2101,-57257
chr8:38010766-38011388	chr8	+	38010773	38011274	True	NM_001204878,NM_000349	chr8,chr8	+,-	BAG4,STAR	22831,-2173
chr16:735192-735524	chr16	+	735257	735571	True	NM_032259,NM_005861,NM_003961,NM_001005920	chr16,chr16,chr16,chr16	-,+,+,-	WDR24,STUB1,RHBDL1,JMJD8	4879,-5193,-9233,-818
chr19:14544809-14545350	chr19	+	14544867	14545343	True	NM_005804,NM_213560,NM_002741	chr19,chr19,chr19	-,+,+	DDX39A,PKN1,PKN1	-14672,5742,-752
chr11:101795355-101795796	chr11	+	101795505	101795843	True	NM_020802,NM_178127	chr11,chr11	+,-	KIAA1377,ANGPTL5	-9823,-8252
chrX:114824466-114824851	chrX	+	114824508	114824864	True	NM_001136025,NM_020871,NM_001172335	chrX,chrX,chrX	+,-,+	PLS3,LRCH2,PLS3	2954,-355873,2954
chr1:119559085-119559295	chr1	+	119559191	119559345	True	NM_001005783,NM_152380	chr1,chr1	+,-	HAO2,TBX15	352056,-27012
chr11:17742992-17743382	chr11	+	17743136	17743302	True	NM_153676,NM_002478	chr11,chr11	-,+	USH1C,MYOD1	-177173,-2077
chr19:30020281-30020590	chr19	+	30020406	30020632	True	NM_001031726,NM_001146339	chr19,chr19	-,+	C19orf12,VSTM2B	185381,-2966
chr5:140864613-140864839	chr5	+	140864692	140864850	True	NM_002588,NM_018929,NM_018928,NM_001079812,NM_032406,NM_032407,NM_032402,NM_032403	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,-,+,+,+,+	PCDHGC3,PCDHGC5,PCDHGC4,DIAPH1,PCDHGC4,PCDHGC5,PCDHGC3,PCDHGC3	-9174,3957,-2,133822,-2,3957,-9174,-9174
chr19:3030367-3030832	chr19	+	3030410	3030641	True	NM_003260,NM_001144762,NM_024760	chr19,chr19,chr19	-,-,+	TLE2,TLE2,TLE6	-1245,-798,-52932
chr12:128084732-128086089	chr12	+	128084898	128085628	True	NR_033970,NR_033987	chr12,chr12	-,+	LOC440117,FLJ37505	-725662,280533
chr1:225653022-225653862	chr1	+	225653071	225653812	True	NM_194442,NM_001130440	chr1,chr1	-,+	LBR,SRP9	-36514,311702
chr3:14237722-14239567	chr3	+	14237899	14239279	True	NR_027299,NM_014463	chr3,chr3	-,+	XPC,LSM3	-17727,-17722
chrX:53201020-53202226	chrX	+	53201415	53202235	True	NM_022117,NM_001146702	chrX,chrX	+,-	TSPYL2,KDM5C	-89924,52419
chr2:219523186-219523474	chr2	+	219523282	219523408	True	NM_001105537,NM_004328,NM_001079866	chr2,chr2,chr2	-,+,+	ZNF142,BCS1L,BCS1L	903,970,970
chr10:124771489-124772110	chr10	+	124771657	124771743	True	NM_001609,NM_022466	chr10,chr10	+,-	ACADSB,IKZF5	-3287,-3346
chr7:23571041-23571604	chr7	+	23571270	23571519	True	NM_013293,NR_026676	chr7,chr7	-,+	TRA2A,RPS2P32	187,-41314
chr10:135042898-135043308	chr10	+	135042949	135043257	True	NR_030170,NM_014468,NM_003577	chr10,chr10,chr10	-,+,+	MIR202,VENTX,UTF1	17917,8150,520
chr17:40815359-40816046	chr17	+	40815401	40815493	True	NM_024927,NM_016437	chr17,chr17	-,+	PLEKHH3,TUBG2	13605,-4186
chr14:73446062-73447366	chr14	+	73446436	73447210	True	NM_178441,NM_181341	chr14,chr14	-,+	ZFYVE1,DCAF4	6504,-53447
chr19:787885-788233	chr19	+	787944	788085	True	NM_024888,NM_175847,NM_031991,NM_031990,NM_002819	chr19,chr19,chr19,chr19,chr19	-,+,+,+,+	LPPR3,PTBP1,PTBP1,PTBP1,PTBP1	33922,9306,9306,9306,9306
chr2:234464372-234464684	chr2	+	234464395	234464491	True	NM_019076,NM_018218	chr2,chr2	+,-	UGT1A8,USP40	61799,9797
chr5:139421147-139421847	chr5	+	139421146	139421674	True	NM_001184935,NM_013982,NM_013983,NM_013981,NM_004883,NM_005859	chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,-,+	NRG2,NRG2,NRG2,NRG2,NRG2,PURA	1260,1260,1260,1260,1260,72033
chr6:55105078-55106166	chr6	+	55105229	55106203	True	NM_001526,NM_001042406	chr6,chr6	+,-	HCRTR2,HMGCLL1	-66209,337860
chr19:12912314-12912539	chr19	+	12912440	12912588	True	NM_005809,NM_181738,NM_006397	chr19,chr19,chr19	-,-,+	PRDX2,PRDX2,RNASEH2A	156,156,4839
chr3:179169587-179170260	chr3	+	179169747	179170305	True	NM_033540,NM_021629	chr3,chr3	+,-	MFN1,GNB4	-104318,-376
chr18:74518728-74519099	chr18	+	74518747	74518967	True	NM_007345,NM_001025081	chr18,chr18	+,-	ZNF236,MBP	17148,210138
chr1:111679798-111681127	chr1	+	111679923	111680923	True	NM_178454,NM_006090,NM_001007794	chr1,chr1,chr1	-,+,+	DRAM2,CEPT1,CEPT1	1972,1909,1325
chr5:10605731-10607385	chr5	+	10605944	10607394	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-41560,154043
chr11:17411222-17411496	chr11	+	17411255	17411542	True	NM_001166290,NM_001202439,NM_000525	chr11,chr11,chr11	-,+,-	KCNJ11,DKFZp686O24166,KCNJ11	-377,-37997,-1049
chr10:42861056-42861407	chr10	+	42861171	42861236	True	NR_024380,NR_026827	chr10,chr10	-,+	LOC441666,LOC84856	2312,109702
chr11:119236898-119238206	chr11	+	119236925	119238223	True	NM_171997,NR_034160	chr11,chr11	-,+	USP2,LOC100499227	-2033,14264
chr8:37656815-37657169	chr8	+	37656992	37657134	True	NM_018310,NM_032777	chr8,chr8	-,+	BRF2,GPR124	50347,-2642
chr7:2279191-2280420	chr7	+	2279271	2280346	True	NM_003550,NM_198954,NM_002452,NM_198952,NM_198950,NM_013393,NM_001013836,NM_001013837,NM_198948,NM_198949,NM_198953	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,+,-,-,-,+,+,+	MAD1L1,NUDT1,NUDT1,NUDT1,NUDT1,FTSJ2,MAD1L1,MAD1L1,NUDT1,NUDT1,NUDT1	-6688,2193,1510,1549,1549,1540,-6688,-6688,1510,1510,2193
chr4:20296157-20296922	chr4	+	20296341	20296785	True	NM_147181,NM_004787	chr4,chr4	-,+	KCNIP4,SLIT2	555562,-41168
chr17:68120515-68121995	chr17	+	68120677	68121677	True	NM_170742,NR_036534	chr17,chr17	+,-	KCNJ16,FLJ36644	-19733,43929
chr7:156433799-156434401	chr7	+	156433927	156434433	True	NR_026865,NM_001184996,NM_001184997,NM_030936	chr7,chr7,chr7,chr7	-,+,+,+	C7orf13,RNF32,RNF32,RNF32	-579,-537,1237,-625
chr11:122482927-122484807	chr11	+	122483273	122484729	True	NM_032873,NM_001098169	chr11,chr11	+,-	UBASH3B,BSX	41668,367700
chr16:3658040-3658503	chr16	+	3658189	3658495	True	NM_005223,NM_032444	chr16,chr16	+,-	DNASE1,SLX4	44444,3140
chr10:73157362-73157682	chr10	+	73157623	73157729	True	NM_001164375,NM_001171930,NM_001171931,NM_001171932,NM_022124,NM_052836	chr10,chr10,chr10,chr10,chr10,chr10	-,+,+,+,+,+	C10orf105,CDH23,CDH23,CDH23,CDH23,CDH23	321899,-983,-983,-983,-983,-983
chr16:46783398-46784317	chr16	+	46783684	46784323	True	NM_182493,NR_037620	chr16,chr16	-,+	MYLK3,ORC6	-1463,-60184
chr1:27712624-27713456	chr1	+	27712724	27713468	True	NM_207397,NM_005281	chr1,chr1	-,+	CD164L2,GPR3	-2919,5683
chrX:102631566-102631852	chrX	+	102631565	102631900	True	NM_206915,NM_206917,NM_014380,NM_032621	chrX,chrX,chrX,chrX	+,+,+,-	NGFRAP1,NGFRAP1,NGFRAP1,BEX2	-348,-348,208,-65591
chr17:30261745-30261989	chr17	+	30261744	30261888	True	NM_018428,NM_015355	chr17,chr17	-,+	UTP6,SUZ12	-33015,2155
chr4:1898617-1900245	chr4	+	1899269	1899814	True	NM_007331,NM_012318,NM_133330,NM_133331,NM_133334,NM_133335	chr4,chr4,chr4,chr4,chr4,chr4	+,-,+,+,+,+	WHSC1,LETM1,WHSC1,WHSC1,WHSC1,WHSC1	-4811,-41295,-4811,-4811,2538,-4811
chr17:40835099-40835776	chr17	+	40835203	40835709	True	NM_016602,NM_024927,NM_003632	chr17,chr17,chr17	-,-,+	CCR10,PLEKHH3,CNTNAP1	-1358,-6155,-622
chr1:23673573-23674452	chr1	+	23673927	23674373	True	NR_033690,NM_001102398,NM_001102399,NM_005826,NM_001102397	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	C1orf213,HNRNPR,HNRNPR,HNRNPR,HNRNPR	21090,-3074,-3074,-3074,-3074
chr12:120312613-120313646	chr12	+	120312840	120313527	True	NM_207311,NM_007174	chr12,chr12	+,-	CCDC64,CIT	114120,1615
chr7:150549287-150549805	chr7	+	150549305	150549683	True	NM_001091,NM_014020	chr7,chr7	+,-	ABP1,TMEM176B	-41,-50857
chr15:37391309-37391719	chr15	+	37391329	37391746	True	NM_170674,NM_170675,NM_170676,NM_170677,NM_172315,NM_172316,NM_002399,NM_032499	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,-,-,-,-,-,+	MEIS2,MEIS2,MEIS2,MEIS2,MEIS2,MEIS2,MEIS2,C15orf41	1015,1015,1015,1015,-826,-20,1811,-458574
chr7:56124279-56124580	chr7	+	56124436	56124499	True	NM_001762,NM_001042470,NM_004577,NM_001042469,NM_001146333,NM_015411,NR_002957,NM_001130069,NM_001009186	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,+,-,+,+,+,+,+,+	CCT6A,SUMF2,PSPH,SUMF2,SUMF2,SUMF2,SNORA15,SUMF2,CCT6A	-5111,7417,-5168,7417,7417,7417,3663,7417,-5111
chr12:53836799-53838272	chr12	+	53837040	53838112	True	NM_001128911,NM_001128912,NM_001128913,NM_001128914,NM_031989,NM_005016,NM_001005354,NM_001193511,NM_018457,NM_001098620	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,+,+,+,+,+,-,+,+	PCBP2,PCBP2,PCBP2,PCBP2,PCBP2,PCBP2,PRR13,MAP3K12,PRR13,PCBP2	7773,7773,7773,7773,7773,7773,-1662,55382,-1662,7773
chr7:148893968-148894512	chr7	+	148894040	148894530	True	NM_001001661,NM_003575	chr7,chr7	-,+	ZNF425,ZNF282	-70602,-1514
chr5:786214-786561	chr5	+	786264	786424	True	NM_001166260,NM_024786	chr5,chr5	+,-	TRIP13,ZDHHC11	106544,64727
chr5:786214-786561	chr5	+	694932	695092	False	NM_018140,NM_007030	chr5,chr5	+,-	CEP72,TPPP	-82579,-1422
chr11:2721135-2721407	chr11	+	2721348	2721422	True	NR_024627,NR_002728	chr11,chr11	+,-	KCNQ1DN,KCNQ1OT1	169840,-120
chr10:75398971-75399753	chr10	+	75399218	75399736	True	NM_021245,NM_004922	chr10,chr10	-,+	MYOZ1,SEC24C	1829,104394
chr15:64679503-64679722	chr15	+	64679618	64679741	True	NM_001029989,NM_016213,NM_014736	chr15,chr15,chr15	-,+,-	KIAA0101,TRIP4,KIAA0101	-5916,261,-5916
chr3:169940680-169942402	chr3	+	169940954	169942220	True	NM_002740,NM_024947	chr3,chr3	+,-	PRKCI,PHC3	-785,-41417
chr1:15574215-15574930	chr1	+	15574263	15574830	True	NM_052929,NR_027136	chr1,chr1	+,-	FHAD1,C1orf126	-546,-95303
chr16:3491267-3492395	chr16	+	3492004	3492294	True	NM_001083601,NM_152457	chr16,chr16	+,-	NAT15,ZNF597	1373,1250
chr19:53936426-53937130	chr19	+	53936554	53937124	True	NM_001008401,NR_003148,NM_033341	chr19,chr19,chr19	+,+,-	ZNF761,LOC147804,BIRC8	-1378,-1364,-141679
chr6:44194765-44195993	chr6	+	44195018	44196030	True	NM_004955,NM_178148,NM_001078174,NM_001078175,NM_001078176,NM_001078177	chr6,chr6,chr6,chr6,chr6,chr6	+,-,+,+,+,+	SLC29A1,SLC35B2,SLC29A1,SLC29A1,SLC29A1,SLC29A1	-7827,29303,-7827,-3773,-3773,-3706
chr22:24989608-24989914	chr22	+	24989791	24989957	True	NM_005265,NM_207644,NM_001032364	chr22,chr22,chr22	+,-,+	GGT1,C22orf36,GGT1	9222,-756,9166
chr5:126853585-126853836	chr5	+	126853660	126853882	True	NM_130809,NM_001164478	chr5,chr5	+,-	PRRC1,FLJ44606	-402,-444476
chr7:128471598-128472457	chr7	+	128471809	128472430	True	NM_001127487,NM_001708,NM_001458	chr7,chr7,chr7	+,-,+	FLNC,OPN1SW,FLNC	-1377,-55965,-1377
chr9:117271934-117272463	chr9	+	117271944	117272368	True	NM_001083885,NM_004888,NM_001173425,NM_015404	chr9,chr9,chr9,chr9	-,+,-,-	DFNB31,ATP6V1G1,DFNB31,DFNB31	-6449,77625,-4208,-4208
chr11:8605817-8606930	chr11	+	8605853	8606396	True	NM_000990,NM_030906	chr11,chr11	+,-	RPL27A,STK33	97598,9166
chr3:120025102-120025586	chr3	+	120025239	120025449	True	NM_001099678,NM_001168331	chr3,chr3	-,+	LRRC58,NDUFB4	42787,289678
chr3:186524639-186525069	chr3	+	186524662	186525083	True	NR_002588,NM_181573,NM_002916	chr3,chr3,chr3	+,-,-	SNORA4,RFC4,RFC4	-19311,-178,-372
chr1:6660638-6661325	chr1	+	6660677	6661329	True	NM_014851,NM_153812	chr1,chr1	-,+	KLHL21,PHF13	1650,12426
chrX:65717348-65717570	chrX	+	65717408	65717512	True	NM_001199689,NM_014799	chrX,chrX	-,+	EDA2R,HEPH	141430,-333353
chr5:173168192-173169101	chr5	+	173168215	173169096	True	NM_030627,NM_138369	chr5,chr5	+,-	CPEB4,BOD1	146234,-124549
chr14:45371690-45373117	chr14	+	45372056	45373139	True	NM_017658,NM_001017923	chr14,chr14	-,+	KLHL28,C14orf28	58095,-5607
chr9:34120591-34122006	chr9	+	34120686	34121614	True	NM_015397,NM_001171201	chr9,chr9	-,+	DCAF12,UBAP1	5208,57388
chr12:11077859-11079016	chr12	+	11077927	11078999	True	NM_001110213,NM_023922,NM_005042	chr12,chr12,chr12	+,-,+	PRH2,TAS2R14,PRH2	2835,12865,2834
chr2:96935056-96935476	chr2	+	96935056	96935367	True	NM_004804,NM_017849,NM_001193304	chr2,chr2,chr2	+,-,-	CIAO1,TMEM127,TMEM127	-3223,-3305,-3305
chr17:34747391-34747807	chr17	+	34747454	34747520	True	NM_001123392,NM_004773	chr17,chr17	-,+	TBC1D3H,ZNHIT3	9580,94952
chr17:34747391-34747807	chr17	-	36293495	36293579	False	NM_032258,NR_024178,NM_001123391	chr17,chr17,chr17	+,-,+	TBC1D3F,LOC284100,TBC1D3	-9604,-49132,-9604
chr17:34747391-34747807	chr17	+	36339046	36339130	False	NM_032258,NM_001123391	chr17,chr17	-,-	TBC1D3F,TBC1D3	9604,9604
chr17:34747391-34747807	chr17	+	34798505	34798571	False	NM_001040282,NM_004773,NM_001001418	chr17,chr17,chr17	-,+,-	TBC1D3G,ZNHIT3,TBC1D3C	9582,43901,9570
chr17:34747391-34747807	chr17	+	34494394	34494460	False	NM_001001417,NM_001001435	chr17,chr17	-,+	TBC1D3B,CCL4L1	9578,44007
chr17:34747391-34747807	chr17	+	34582420	34582504	False	NM_207007,NM_001001418	chr17,chr17	+,-	CCL4L2,TBC1D3C	-44021,9591
chr14:24025677-24026058	chr14	+	24025697	24026093	True	NR_023314,NM_024328,NM_033400,NM_001126339	chr14,chr14,chr14,chr14	+,+,-,+	THTPA,THTPA,ZFHX2,THTPA	-550,-550,-4839,-550
chr1:38511303-38511718	chr1	+	38511371	38511701	True	NM_016037,NM_002699	chr1,chr1	+,-	UTP11L,POU3F1	-33038,799
chr5:180170259-180171776	chr5	+	180170358	180171739	True	NM_001001657,NR_027183	chr5,chr5	-,+	OR2Y1,LOC729678	-3300,85219
chr12:118809549-118809752	chr12	+	118809634	118809784	True	NM_022491,NM_016281	chr12,chr12	+,-	SUDS3,TAOK3	4573,1016
chr3:187896518-187896941	chr3	+	187896535	187896739	True	NR_024413,NR_036497	chr3,chr3	+,-	FLJ42393,LOC339929	-255,-24659
chrX:30261202-30262375	chrX	+	30261266	30262407	True	NM_177415,NM_177404,NM_002363,NM_000475,NM_002367	chrX,chrX,chrX,chrX,chrX	+,+,+,-,+	MAGEB1,MAGEB1,MAGEB1,NR0B1,MAGEB4	80,2863,80,65144,-1261
chr4:39100477-39100830	chr4	+	39100521	39100617	True	NM_199039,NM_024943	chr4,chr4	+,-	KLHL5,TMEM156	-36722,-66480
chrX:101100635-101102336	chrX	+	101100788	101102370	True	NM_032946,NM_177948	chrX,chrX	-,+	NXF5,ARMCX3	10229,-222495
chr3:195450034-195450863	chr3	+	195450057	195450881	True	NM_001098516,NM_004532,NM_152673	chr3,chr3,chr3	+,-,+	MUC20,MUC4,MUC20	216,88317,-2355
chr3:195450034-195450863	chr3	+	195344124	195344521	False	NM_001647,NR_003265	chr3,chr3	-,+	APOD,SDHAP2	-33048,40388
chr6:170192508-170192859	chr6	+	170192603	170192875	True	NR_026781,NR_026780	chr6,chr6	-,+	NCRNA00242,C6orf208	6096,-2485
chr16:56459657-56461092	chr16	+	56459845	56461105	True	NM_018233,NM_001144	chr16,chr16	+,-	OGFOD1,AMFR	24318,-401
chr12:104425324-104426747	chr12	+	104425751	104426655	True	NM_013320,NM_031302	chr12,chr12	+,-	HCFC2,GLT8D2	31580,17323
chr12:104425324-104426747	chr12	-	94034117	94034167	False	NM_003348,NM_003805	chr12,chr12	-,+	UBE2N,CRADD	-198091,36983
chr11:10592382-10592752	chr11	+	10592427	10592775	True	NM_006691,NR_034093	chr11,chr11	-,+	LYVE1,LOC100129827	-2062,-29655
chr2:229476736-229477072	chr2	+	229476921	229477040	True	NM_178821,NM_030623	chr2,chr2	+,-	WDR69,SPHKAP	-740650,-430560
chrX:138530061-138530418	chrX	+	138530102	138530374	True	NR_028597,NM_001171877	chrX,chrX	+,-	SRD5A1P1,MCF2	-1176,194676
chr1:24524681-24525263	chr1	+	24524698	24525034	True	NM_173065,NR_027087	chr1,chr1	-,+	IL28RA,LOC284632	-10933,1695
chr6:20267821-20268518	chr6	+	20267840	20268564	True	NM_001949,NM_001080480	chr6,chr6	+,-	E2F3,MBOAT1	133572,-55170
chr20:56883837-56884505	chr20	+	56883873	56884320	True	NR_003505,NM_020673	chr20,chr20	-,+	PPP4R1L,RAB22A	225,450
chr22:32650645-32650975	chr22	+	32650835	32651003	True	NM_014227,NM_006604	chr22,chr22	-,+	SLC5A4,RFPL3	365,99868
chr19:43891845-43892589	chr19	+	43891866	43892556	True	NM_031451,NM_014400	chr19,chr19	+,-	TEX101,LYPD3	206,77325
chr19:43891845-43892589	chr19	-	43329260	43329310	False	NR_026824,NR_036584	chr19,chr19	-,+	PSG10P,LOC100289650	30610,-3296
chr19:43891845-43892589	chr19	-	43849227	43849277	False	NM_020406,NR_026881,NM_002784	chr19,chr19,chr19	+,+,-	CD177,PRG1,PSG9	8547,3930,-75545
chr19:49219439-49220260	chr19	+	49219651	49220003	True	NM_001130915,NM_001097638,NM_182574	chr19,chr19,chr19	-,+,-	MAMSTR,FUT2,MAMSTR	3023,-20474,261
chr8:355498-356464	chr8	+	355571	356424	True	NM_175075,NM_183420,NM_183421,NM_012173	chr8,chr8,chr8,chr8	-,+,+,+	C8orf42,FBXO25,FBXO25,FBXO25	138964,383,383,383
chr5:52774640-52775555	chr5	+	52774672	52775348	True	NM_013409,NM_006350,NM_176806	chr5,chr5,chr5	+,+,-	FST,FST,MOCS2	1246,1246,-369074
chr18:21979353-21980352	chr18	+	21979483	21980336	True	NM_080597,NM_018439	chr18,chr18	-,+	OSBPL1A,IMPACT	-1693,26272
chr5:140233719-140235433	chr5	+	140233877	140235460	True	NM_014005,NM_031860,NM_002109,NM_031859,NM_018901,NM_031857	chr5,chr5,chr5,chr5,chr5,chr5	+,+,-,+,+,+	PCDHA9,PCDHA10,HARS,PCDHA10,PCDHA10,PCDHA9	-6583,173,-162906,173,173,-6583
chr1:248058640-248059034	chr1	+	248058654	248059020	True	NM_001001959,NM_001001957	chr1,chr1	-,+	OR11L1,OR2W3	-53456,-22
chr4:148651954-148652179	chr4	+	148651954	148652023	True	NM_138364,NM_024605	chr4,chr4	-,+	PRMT10,ARHGAP10	-46674,1429
chr2:63591159-63592232	chr2	+	63591222	63592270	True	NM_015910,NM_005917	chr2,chr2	-,+	WDPCP,MDH1	223647,223472
chr13:97876457-97878101	chr13	+	97876698	97878047	True	NM_144778,NM_080818,NM_207304	chr13,chr13,chr13	+,-,+	MBNL2,OXGR1,MBNL2	-2176,-230094,-2176
chr3:32232242-32232580	chr3	+	32232477	32232601	True	NM_017784,NM_178868	chr3,chr3	-,+	OSBPL10,CMTM8	-209135,47569
chr20:34118167-34118677	chr20	+	34118391	34118561	True	NM_015966,NR_026933,NM_001145350	chr20,chr20,chr20	+,-,-	ERGIC3,C20orf173,C20orf173	11216,-910,-910
chr12:79946141-79946745	chr12	+	79946147	79946672	True	NR_031700,NM_002583	chr12,chr12	+,-	MIR1252,PAWR	-133161,138177
chr14:50701246-50702593	chr14	+	50701767	50702331	True	NM_006939,NM_015684	chr14,chr14	-,+	SOS2,ATP5S	-3668,76715
chr10:100028927-100029595	chr10	+	100028982	100029630	True	NM_014472,NM_032211	chr10,chr10	+,-	C10orf28,LOXL4	-134652,-975
chr11:76838017-76839241	chr11	+	76838094	76839012	True	NM_182833,NM_001127179,NM_000260,NM_001127180	chr11,chr11,chr11,chr11	-,+,+,+	GDPD4,MYO7A,MYO7A,MYO7A	159501,297,297,303
chr6:4080640-4080875	chr6	+	4080702	4080890	True	NM_001085401,NM_173563	chr6,chr6	+,-	C6orf201,C6orf146	-1321,-1245
chr2:219577403-219579372	chr2	+	219577601	219579354	True	NM_022453,NM_014640	chr2,chr2	-,+	RNF25,TTLL4	-40820,-2084
chr11:58913144-58914525	chr11	+	58913145	58914545	True	NM_198847,NM_001142519,NM_001142520,NM_022074,NM_001142521,NM_001039396	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,-	FAM111A,FAM111A,FAM111A,FAM111A,FAM111A,MPEG1	-944,-2878,-2878,-944,-2878,65999
chr16:28412689-28413769	chr16	+	28412719	28413425	True	NM_003752,NM_018690,NM_001099661,NM_001037808	chr16,chr16,chr16,chr16	-,+,-,-	EIF3C,APOBR,EIF3CL,EIF3C	1790,92567,1787,1790
chr16:28412689-28413769	chr16	-	28724521	28725227	False	NM_003752,NM_001099661,NM_001037808,NM_177536	chr16,chr16,chr16,chr16	+,+,+,-	EIF3C,EIF3CL,EIF3C,SULT1A1	-1790,-1787,-1790,-89655
chrX:106958497-106959171	chrX	+	106958530	106959154	True	NM_001015881,NM_002764,NM_004089	chrX,chrX,chrX	-,+,-	TSC22D3,PRPS1,TSC22D3	607,-86927,1187
chr3:36933352-36934175	chr3	+	36933456	36934046	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	52552,100794
chr10:135123019-135123242	chr10	+	135123093	135123251	True	NM_006659,NM_145806	chr10,chr10	-,+	TUBGCP2,ZNF511	-449,-721
chr14:100149600-100149817	chr14	+	100149652	100149742	True	NM_001144995,NM_006668	chr14,chr14	-,+	CCDC85C,CYP46A1	-78925,1012
chr12:128038155-128039708	chr12	+	128038315	128039703	True	NR_033970,NR_033987	chr12,chr12	-,+	LOC440117,FLJ37505	-679079,326458
chrX:23682024-23682909	chrX	+	23682217	23682835	True	NM_006406,NM_001033583	chrX,chrX	+,-	PRDX4,ACOT9	2809,78622
chr17:34333664-34334079	chr17	+	34333783	34333849	True	NR_027922,NM_002988,NR_027921,NM_032965	chr17,chr17,chr17,chr17	-,+,-,-	CCL14-CCL15,CCL18,CCL14-CCL15,CCL15	-4699,57793,-4699,-4699
chr1:235321072-235322152	chr1	+	235321086	235322118	True	NM_001037277,NM_015014,NR_027762,NM_001161533	chr1,chr1,chr1,chr1	+,-,-,-	GGPS1,RBM34,RBM34,RBM34	169634,2505,2505,2505
chr16:84403897-84404117	chr16	+	84403938	84404096	True	NM_014861,NM_172347	chr16,chr16	+,-	ATP2C2,KCNG4	-1856,-130582
chr21:44743144-44743396	chr21	+	44743151	44743359	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	126544,103693
chr15:40546171-40547408	chr15	+	40546174	40547328	True	NM_020168,NM_001039905	chr15,chr15	+,-	PAK6,C15orf56	-14190,-1064
chr21:45346764-45347961	chr21	+	45347028	45347998	True	NR_026961,NM_001037553	chr21,chr21	-,+	LOC284837,AGPAT3	-114580,-1800
chr1:90293282-90295252	chr1	+	90293332	90295237	True	NM_018103,NM_001134479,NR_002830	chr1,chr1,chr1	+,+,-	LRRC8D,LRRC8D,GEMIN8P4	-5903,-6810,165338
chr10:126433917-126435130	chr10	+	126433958	126435144	True	NM_032182,NM_014661	chr10,chr10	+,-	FAM175B,FAM53B	55209,-1028
chr7:150446024-150446750	chr7	+	150446128	150446670	True	NM_001162367,NM_001101311	chr7,chr7	+,-	LOC100128542,TMEM176B	153,51015
chr1:16370703-16371279	chr1	+	16370793	16371225	True	NM_014424,NM_001165945,NM_000085	chr1,chr1,chr1	-,+,+	HSPB7,CLCNKB,CLCNKB	-25508,4058,-597
chr7:88389048-88389280	chr7	+	88389172	88389328	True	NM_152706,NM_181646	chr7,chr7	-,+	C7orf62,ZNF804B	35753,-470
chr19:15996783-15997015	chr19	+	15996884	15996948	True	NM_001082,NR_015379	chr19,chr19	-,+	CYP4F2,UCA1	11986,-57178
chr20:590283-590571	chr20	+	590438	590584	True	NM_004609,NM_031229	chr20,chr20	-,+	TCF15,RBCK1	376,-201780
chr6:160391123-160391850	chr6	+	160391135	160391780	True	NM_000876,NM_030752	chr6,chr6	+,-	IGF2R,TCP1	-1055,-180400
chr18:55252920-55253578	chr18	+	55252926	55253510	True	NM_001012515,NM_004852,NM_000140	chr18,chr18,chr18	-,+,-	FECH,ONECUT2,FECH	509,-150060,509
chr12:107975399-107976538	chr12	+	107975454	107976496	True	NM_012406,NM_001017523	chr12,chr12	-,+	PRDM4,BTBD11	178468,-871
chr7:56359318-56359865	chr7	+	56359392	56359632	True	NR_029420,NR_026929	chr7,chr7	-,+	LOC650226,DKFZp434L192	156494,204283
chr4:110477641-110478146	chr4	+	110477793	110477938	True	NM_017918,NM_001226	chr4,chr4	+,-	CCDC109B,CASP6	3416,146742
chr12:65153671-65154265	chr12	+	65153724	65154041	True	NM_002076,NM_015279	chr12,chr12	-,+	GNS,TBC1D30	-498,64310
chr18:12306810-12307302	chr18	+	12306810	12307285	True	NM_006796,NM_032525	chr18,chr18	-,+	AFG3L2,TUBB6	70040,971
chr16:57220517-57220767	chr16	+	57220521	57220815	True	NM_133368,NM_024946	chr16,chr16	+,-	RSPRY1,FAM192A	-331,-545
chr11:806876-807401	chr11	+	806879	806941	True	NM_145887,NM_145886,NM_001191060,NM_001191061,NM_001004,NR_002585	chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,+,+	LRDD,LRDD,SLC25A22,SLC25A22,RPLP2,SNORA52	-1629,-1629,-8884,-8610,2994,4739
chrX:38226611-38227264	chrX	+	38226631	38226956	True	NM_001034853,NM_000531	chrX,chrX	-,+	RPGR,OTC	-39843,-14958
chr1:28974240-28974728	chr1	+	28974513	28974775	True	NR_004407,NM_005644,NM_001135218	chr1,chr1,chr1	+,-,-	RNU11,TAF12,TAF12	336,-4909,-4909
chr1:201916018-201916522	chr1	+	201916025	201916479	True	NM_006335,NM_012134	chr1,chr1	+,-	TIMM17A,LMOD1	8139,-309
chr1:20879639-20879851	chr1	+	20879646	20879762	True	NM_024544,NM_207334	chr1,chr1	-,+	MUL1,FAM43B	-44972,-765
chr7:3083444-3083684	chr7	+	3083453	3083600	True	NM_032415,NM_152744	chr7,chr7	-,+	CARD11,SDK1	-34,257479
chr22:43041172-43041467	chr22	+	43041194	43041508	True	NM_001171660,NM_001171661,NM_001129819,NM_000398,NM_007326,NR_029422,NM_001165877	chr22,chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,-,+,-	CYB5R3,CYB5R3,CYB5R3,CYB5R3,CYB5R3,RNU12,ATP5L2	-554,1537,1537,3947,1537,-29994,-4587
chr3:3156151-3157415	chr3	+	3156775	3157106	True	NM_000564,NM_175728,NM_182916,NM_175725,NM_175724,NM_175727,NM_175726	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,+,-,-,-,-	IL5RA,IL5RA,TRNT1,IL5RA,IL5RA,IL5RA,IL5RA	-4717,-4717,11493,-4717,-4717,-4717,-4717
chr2:228037601-228039516	chr2	+	228037689	228039102	True	NM_000091,NM_000092	chr2,chr2	+,-	COL4A3,COL4A4	-8461,-8414
chr1:1984103-1984698	chr1	+	1984157	1984521	True	NM_002744,NM_001080484	chr1,chr1	+,-	PRKCZ,KIAA1751	-2299,-48881
chr11:60989934-60990365	chr11	+	60989951	60990403	True	NM_017966,NM_001079808	chr11,chr11	-,+	VPS37C,PGA4	-61035,-181
chr11:60989934-60990365	chr11	+	60971115	60971567	False	NM_001079807,NM_017966	chr11,chr11	+,-	PGA3,VPS37C	-182,-42199
chr11:60989934-60990365	chr11	+	61008777	61009229	False	NM_014224,NM_152718	chr11,chr11	+,-	PGA5,VWCE	-184,53609
chr6:161413349-161414675	chr6	+	161413509	161414715	True	NM_006724,NR_024277,NM_005922	chr6,chr6,chr6	+,-,+	MAP3K4,NCRNA00241,MAP3K4	-738,168356,-738
chr19:7032802-7033236	chr19	+	7032868	7032940	True	NM_001164419,NM_001136507	chr19,chr19	-,+	MBD3L4,MBD3L5	7294,-2325
chrX:153641623-153642002	chrX	+	153641823	153642043	True	NM_001009932,NM_001009933,NM_001009934,NM_000116,NM_006730,NM_181313,NM_181312,NM_181311,NR_024048	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,+,-,+,+,+,+	DNASE1L1,DNASE1L1,DNASE1L1,TAZ,DNASE1L1,TAZ,TAZ,TAZ,TAZ	-1396,-1396,-1396,-1997,-4248,-1997,-1997,-1997,-1997
chr1:17093645-17094292	chr1	+	17093664	17094312	True	NR_002729,NR_037446	chr1,chr1	-,+	MST1P9,MIR3675	-2689,-85966
chr1:17093645-17094292	chr1	-	234950476	234950904	False	NM_182972,NR_033927	chr1,chr1	-,+	IRF2BP2,NCRNA00184	-205205,-185470
chr17:41796576-41797873	chr17	+	41796773	41797899	True	NM_025237,NM_001136483	chr17,chr17	-,+	SOST,C17orf105	38307,59903
chr11:114310790-114311143	chr11	+	114310849	114311177	True	NM_015523,NM_019021	chr11,chr11	+,-	REXO2,C11orf71	-792,-39710
chr19:41282530-41283894	chr19	+	41282743	41283804	True	NR_037791,NM_198476,NM_016154,NR_037775,NM_001202553,NM_006533	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+	RAB4B-EGLN2,C19orf54,RAB4B,MIA-RAB4B,MIA,MIA	319,-26915,319,-1353,-1713,-1513
chr14:31853823-31855746	chr14	+	31854088	31855792	True	NM_025152,NM_015473	chr14,chr14	+,-	NUBPL,HEATR5A	174798,34047
chr1:169279026-169280376	chr1	+	169279026	169280383	True	NM_003666,NM_013330	chr1,chr1	+,-	BLZF1,NME7	56810,56855
chr20:31872400-31873778	chr20	+	31872400	31873734	True	NM_033197,NM_016082	chr20,chr20	+,-	C20orf114,CDK5RAP1	-1510,115653
chr3:40566839-40568667	chr3	+	40566848	40568331	True	NR_033965,NM_001098414,NM_198484	chr3,chr3,chr3	-,+,+	FLJ33065,ZNF621,ZNF621	-215659,-523,-523
chr8:22927154-22927454	chr8	+	22927286	22927405	True	NM_003842,NM_147187,NR_027140,NM_003841	chr8,chr8,chr8,chr8	-,-,-,+	TNFRSF10B,TNFRSF10B,TNFRSF10B,TNFRSF10C	-586,-586,-586,32921
chr12:104424842-104425125	chr12	+	104424895	104425041	True	NM_013320,NM_031302	chr12,chr12	+,-	HCFC2,GLT8D2	33194,18924
chr12:104424842-104425125	chr12	-	94034877	94035023	False	NM_003348,NM_003805	chr12,chr12	-,+	UBE2N,CRADD	-198851,36127
chr12:104424842-104425125	chr10	+	99190335	99190782	False	NM_002629,NM_016046	chr10,chr10	+,-	PGAM1,EXOSC1	-4359,15036
chr7:81400373-81401232	chr7	+	81400372	81401130	True	NM_001010934,NM_001010932,NM_001010933,NM_001127444,NM_001010931,NM_000601	chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,+,-,-	HGF,HGF,HGF,CD36,HGF,HGF	-920,-920,-920,-1124661,-920,-920
chr17:20615676-20616224	chr17	+	20615896	20616067	True	NM_001190790,NM_001004306	chr17,chr17	+,-	CDRT15L2,CCDC144NL	-132913,183445
chr8:21776262-21776841	chr8	+	21776271	21776723	True	NM_003974,NM_015024	chr8,chr8	-,+	DOK2,XPO7	-5066,456
chr19:42932096-42933270	chr19	+	42932269	42933095	True	NM_001410,NM_005357	chr19,chr19	+,-	MEGF8,LIPE	-102559,-691
chr3:172428838-172430752	chr3	+	172428842	172430189	True	NM_001146278,NM_020792,NM_018098,NM_001146277,NM_001146276	chr3,chr3,chr3,chr3,chr3	-,-,+,-,-	NCEH1,NCEH1,ECT2,NCEH1,NCEH1	-70,-70,42108,-70,-70
chr2:28615194-28615404	chr2	+	28615298	28615390	True	NM_017910,NM_005253	chr2,chr2	-,+	TRMT61B,FOSL2	477835,388
chr3:150412695-150413158	chr3	+	150412764	150413066	True	NM_016275,NM_152394	chr3,chr3	+,-	SELT,FAM194A	-91749,8726
chr8:27472520-27472820	chr8	+	27472541	27472814	True	NM_001171138,NM_016240,NM_203339,NM_001831	chr8,chr8,chr8,chr8	-,+,-,-	CLU,SCARA3,CLU,CLU	-3273,18762,-3603,-214
chr10:102821293-102821519	chr10	+	102821404	102821488	True	NM_024895,NM_030929	chr10,chr10	-,+	PDZD7,KAZALD1	-30490,-456
chr8:101732973-101733215	chr8	+	101732984	101733200	True	NR_033962,NM_002568	chr8,chr8	+,-	FLJ42969,PABPC1	331081,1165
chr6:6795322-6796579	chr6	+	6795370	6796376	True	NM_004271,NR_026970	chr6,chr6	+,-	LY86,LY86-AS1	-206487,-172311
chr11:114175011-114176242	chr11	+	114175065	114175894	True	NM_019021,NM_006169	chr11,chr11	-,+	C11orf71,NNMT	95297,-8588
chr8:134419828-134420207	chr8	+	134419832	134420184	True	NR_037944,NM_006096	chr8,chr8	+,-	WISP1,NDRG1	-216601,-110285
chr1:151798430-151799313	chr1	+	151798729	151799295	True	NR_024237,NM_001001523,NM_005060	chr1,chr1,chr1	+,-,-	LOC100132111,RORC,RORC	11649,-176,5115
chr6:28237880-28239009	chr6	+	28238095	28239054	True	NM_001111039,NM_001023560,NM_019110,NM_152736	chr6,chr6,chr6,chr6	+,+,-,+	ZNF187,ZNF187,ZKSCAN4,ZNF187	-3358,-3358,-18093,-3358
chr10:75405875-75406729	chr10	+	75406091	75406775	True	NM_021245,NM_024875,NM_001114133,NM_004922	chr10,chr10,chr10,chr10	-,-,-,+	MYOZ1,SYNPO2L,SYNPO2L,SEC24C	-4576,4062,9107,97355
chr3:11192441-11193484	chr3	+	11192469	11193529	True	NM_001098212,NR_027102	chr3,chr3	+,-	HRH1,LOC285370	2684,-386592
chr16:3550203-3550460	chr16	+	3550261	3550335	True	NM_015041,NM_024793,NM_001080524	chr16,chr16,chr16	+,+,-	CLUAP1,CLUAP1,C16orf90	627,9558,-4840
chr16:33944943-33945295	chr16	+	33945094	33945236	True	NR_027080,NR_002837	chr16,chr16	+,-	LOC283914,UBE2MP1	652550,459576
chr3:137483682-137484000	chr3	+	137483722	137483892	True	NM_001170538,NM_004189	chr3,chr3	-,+	DZIP1L,SOX14	348480,-639
chr17:37822303-37823472	chr17	+	37822775	37823363	True	NM_002686,NM_003673,NM_033419	chr17,chr17,chr17	+,+,-	PNMT,TCAP,PGAP3	1143,-1227,20997
chr11:74205782-74206573	chr11	+	74205985	74206601	True	NM_006591,NM_001144869	chr11,chr11	+,-	POLD3,LIPT2	97027,-1230
chr1:151035490-151036060	chr1	+	151035505	151035797	True	NM_001038707,NM_144618,NM_006818,NM_020239	chr1,chr1,chr1,chr1	-,+,+,-	CDC42SE1,GABPB2,MLLT11,CDC42SE1	-3380,7282,-3406,-3380
chr4:109680127-109680938	chr4	+	109680608	109680978	True	NM_001146627,NR_027474,NR_027475,NM_021227,NM_001146590,NM_031279	chr4,chr4,chr4,chr4,chr4,chr4	-,-,-,+,-,-	AGXT2L1,AGXT2L1,AGXT2L1,OSTC,AGXT2L1,AGXT2L1	3307,3307,3307,-108930,3307,3307
chr8:22023867-22025243	chr8	+	22024236	22025066	True	NM_139278,NM_001199,NM_001172357,NR_033403,NR_033404,NM_001172410,NM_006129,NM_003018	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,+,+,+,+,+,+,+	LGI3,BMP1,SFTPC,BMP1,BMP1,SFTPC,BMP1,SFTPC	-9892,-1634,-5103,-1634,-1634,-5103,-1634,-5103
chr10:43761468-43761686	chr10	+	43761492	43761610	True	NM_001184963,NM_145313	chr10,chr10	+,-	FXYD4,RASGEF1A	105481,807
chr17:58227888-58228308	chr17	+	58228046	58228224	True	NM_000717,NR_027408	chr17,chr17	+,-	CA4,LOC653653	-795,-47766
chr16:31144651-31145108	chr16	+	31144767	31145145	True	NM_002773,NM_182958	chr16,chr16	-,+	PRSS8,MYST1	2056,-15833
chr20:35397841-35399312	chr20	+	35397843	35399335	True	NM_080628,NM_024918,NM_001145317,NM_001145316,NM_001145315,NM_001145318	chr20,chr20,chr20,chr20,chr20,chr20	+,-,-,-,-,-	C20orf118,DSN1,DSN1,DSN1,DSN1,DSN1	105234,2869,2945,2869,2945,2945
chr7:75621407-75621882	chr7	+	75621457	75621839	True	NM_031925,NR_002955	chr7,chr7	-,+	TMEM120A,SNORA14A	2203,-48407
chr8:144242104-144242446	chr8	+	144242279	144242439	True	NM_178172,NM_001135655,NM_002347,NM_001130478	chr8,chr8,chr8,chr8	+,-,-,-	GPIHBP1,LY6H,LY6H,LY6H	52628,-524,-822,-226
chr2:215672452-215672853	chr2	+	215672464	215672772	True	NM_000465,NM_001080500	chr2,chr2	-,+	BARD1,VWC2L	1722,-396061
chrX:48899093-48900483	chrX	+	48899197	48900381	True	NM_001163322,NM_006521	chrX,chrX	+,-	CCDC120,TFE3	16134,659
chr2:29115321-29115688	chr2	+	29115321	29115453	True	NM_017910,NM_015131	chr2,chr2	-,+	TRMT61B,WDR43	-22146,2079
chr15:75121149-75121494	chr15	+	75121205	75121411	True	NM_001030005,NM_001099436	chr15,chr15	+,-	CPLX3,ULK3	-2305,14207
chr12:121790431-121791402	chr12	+	121790591	121791233	True	NM_001137559,NM_016237,NM_025126	chr12,chr12,chr12	-,-,+	ANAPC5,ANAPC5,RNF34	829,-326,46668
chr17:62917367-62917855	chr17_ctg5_hap1	+	495488	495634	False	NM_001193465,NM_014834	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	KIAA1267,LRRC37A	67863,-36884
chr17:62917367-62917855	chr17_ctg5_hap1	-	1232932	1233078	False	NR_026901,NR_037772	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LOC644172,CRHR1	-44550,-62479
chr17:62917367-62917855	chr17	+	62917524	62917877	True	NM_199340,NM_001165933	chr17,chr17	-,+	LRRC37A3,RGS9	-2621,215578
chr4:57252933-57253188	chr4	+	57253040	57253243	True	NM_006452,NM_181806	chr4,chr4	+,-	PAICS,AASDH	48671,451
chr8:37309657-37311048	chr8	+	37309832	37310838	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	242462,294776
chr5:169814437-169815968	chr5	+	169814729	169815997	True	NM_004137,NM_001034838	chr5,chr5	-,+	KCNMB1,KCNIP1	691,-33899
chr17:60003241-60004630	chr17	+	60003464	60004598	True	NR_026641,NM_020748,NM_001144933	chr17,chr17,chr17	-,-,+	INTS2,INTS2,EFCAB3	829,829,442980
chr19:23577452-23577937	chr19	+	23577610	23577980	True	NR_003662,NM_003430	chr19,chr19	+,-	RPSAP58,ZNF91	367835,339
chr20:12990714-12991799	chr20	+	12990726	12991844	True	NM_018327,NM_017714	chr20,chr20	+,-	SPTLC3,TASP1	-1150,627789
chr1:249208611-249209306	chr1	+	249208614	249209334	True	NM_001193328,NM_001017434	chr1,chr1	-,+	ZNF692,PGBD2	-55299,-8223
chr9:117551819-117552633	chr9	+	117551887	117552586	True	NM_153045,NM_001204344	chr9,chr9	+,-	C9orf91,TNFSF15	-178243,2275
chr9:98272695-98273096	chr9	+	98272817	98272972	True	NM_001010895,NM_000264,NM_001083602,NM_001083603,NM_001083604,NM_001083605,NM_001083606,NM_001083607	chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9	+,-,-,-,-,-,-,-	C9orf102,PTCH1,PTCH1,PTCH1,PTCH1,PTCH1,PTCH1,PTCH1	364927,-1986,6325,6325,-2495,-2495,-3118,-3336
chr1:23571612-23572512	chr1	+	23571630	23572382	True	NR_033690,NM_000864	chr1,chr1	+,-	C1orf213,HTR1D	123081,-50408
chr12:117317702-117318372	chr12	+	117317768	117318328	True	NM_003806,NM_012174	chr12,chr12	-,+	HRK,FBXW8	954,30432
chr1:182805216-182806507	chr1	+	182805275	182806131	True	NM_030933,NM_001357,NR_033302	chr1,chr1,chr1	-,+,+	SHCBP1L,DHX9,DHX9	116472,2307,2307
chr19:1040305-1040548	chr19	+	1040355	1040577	True	NM_033420,NM_019112	chr19,chr19	-,+	C19orf6,ABCA7	-19214,-304
chr20:38616715-38618403	chr20	+	38617059	38618211	True	NR_033905,NM_005461	chr20,chr20	+,-	DHX35,MAFB	-1026140,699727
chr21:43804798-43805591	chr21	+	43804858	43805572	True	NM_001001895,NR_027348	chr21,chr21	+,-	UBASH3A,TMPRSS3	18446,3731
chr15:45815021-45815256	chr15	+	45815195	45815261	True	NR_022014,NM_013309	chr15,chr15	+,-	HMGN2P46,SLC30A4	-11912,-193
chr3:8989298-8989810	chr3	+	8989412	8989838	True	NM_020165,NM_001234	chr3,chr3	-,+	RAD18,CAV3	15371,-213974
chr22:39916545-39916763	chr22	+	39916555	39916623	True	NM_194326,NM_182810,NM_001675	chr22,chr22,chr22	-,+,+	RPS19BP1,ATF4,ATF4	12287,-37,-37
chr12:93771552-93771794	chr12	+	93771693	93771837	True	NM_003348,NM_199040,NM_019094,NR_002212	chr12,chr12,chr12,chr12	-,+,+,+	UBE2N,NUDT4,NUDT4,NUDT4P1	64239,-43,-43,0
chr12:93771552-93771794	chr1	-	145139810	145139928	False	NM_004892,NM_022359	chr1,chr1	+,-	SEC22B,PDE4DIP	-43454,-63624
chr15:78189323-78189646	chr15	+	78189338	78189672	True	NM_001101404,NR_027024	chr15,chr15	+,-	SH2D7,LOC645752	195254,29566
chr15:78189323-78189646	chr15	-	75982088	75982258	False	NM_175881,NM_001897	chr15,chr15	+,-	ODF3L1,CSPG4	34060,22981
chr2:216176210-216176488	chr2	+	216176358	216176483	True	NM_002026,NM_004044	chr2,chr2	-,+	FN1,ATIC	124359,195
chr7:89874819-89875037	chr7	+	89874829	89874891	True	NM_001039706,NM_001160138,NM_152706	chr7,chr7,chr7	+,+,-	C7orf63,C7orf63,C7orf62	-392,-392,-1449798
chr8:128747333-128748153	chr8	+	128747595	128748123	True	NM_002467,NR_024393	chr8,chr8	+,-	MYC,LOC727677	191,-253211
chr22:47158237-47158511	chr22	+	47158407	47158499	True	NM_022766,NM_014346	chr22,chr22	-,+	CERK,TBC1D22A	-24255,18
chr2:239757361-239757598	chr2	+	239757485	239757617	True	NR_034162,NM_057179	chr2,chr2	-,+	FLJ43879,TWIST2	90398,-863
chr19:57675865-57676893	chr19	+	57676108	57676815	True	NM_001012729,NM_003417	chr19,chr19	-,+	DUXA,ZNF264	2097,26052
chr11:89200441-89200670	chr11	+	89200567	89200709	True	NM_001143836,NM_153696	chr11,chr11	-,+	NOX4,FOLH1B	23994,191755
chr16:57472424-57473148	chr16	+	57472648	57473126	True	NM_020313,NM_020312	chr16,chr16	-,+	CIAPIN1,COQ9	8293,8210
chr19:855284-855496	chr19	+	855296	855482	True	NM_001972,NM_001928,NM_024888	chr19,chr19,chr19	+,+,-	ELANE,CFD,LPPR3	-3056,4182,-33344
chr1:165544181-165545108	chr1	+	165544261	165545008	True	NR_026744,NM_001005214	chr1,chr1	-,+	LOC400794,LRRC52	6384,-30835
chr1:1217834-1218751	chr1	+	1217974	1218530	True	NR_037668,NM_194458,NM_194315,NM_194457,NM_001130413,NM_058167	chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,-,+,-	SCNN1D,UBE2J2,UBE2J2,UBE2J2,SCNN1D,UBE2J2	-7387,-8740,-8740,-8740,-7387,-8740
chr7:151134034-151134531	chr7	+	151134067	151134531	True	NR_034013,NM_144727,NR_037468	chr7,chr7,chr7	+,-,-	LOC100131176,CRYGN,MIR3907	-27796,2618,-3342
chr1:230885177-230886288	chr1	+	230885361	230886159	True	NM_016452,NM_000029,NM_006615	chr1,chr1,chr1	+,-,+	CAPN9,AGT,CAPN9	-2264,-35025,-2295
chr12:45289886-45291133	chr12	+	45290088	45290970	True	NM_001025356,NM_001145110	chr12,chr12	+,-	ANO6,NELL2	318799,16803
chrX:101719473-101720112	chrX	+	101719590	101720142	True	NM_017809,NR_002216,NM_001099686	chrX,chrX,chrX	-,+,-	NXF2,NXF4,NXF2B	6640,84750,6640
chrX:101719473-101720112	chrX	-	101476881	101477433	False	NM_001012978,NM_017809,NM_001099686	chrX,chrX,chrX	-,+,+	BEX5,NXF2,NXF2B	-65895,-6652,-6652
chr6:10413443-10413708	chr6	+	10413450	10413756	True	NM_001042425,NM_001032280,NM_003220,NR_033910	chr6,chr6,chr6,chr6	-,-,-,+	TFAP2A,TFAP2A,TFAP2A,LOC100130275	6091,-843,1764,-950
chr16:56691242-56691549	chr16	+	56691258	56691490	True	NM_005947,NM_005949,NM_005950	chr16,chr16,chr16	+,+,-	MT1B,MT1F,MT1G	-5498,364,10537
chr3:37207219-37208067	chr3	+	37207386	37207986	True	NM_017724,NM_006309,NM_001172713,NM_001134369	chr3,chr3,chr3,chr3	-,-,+,-	LRRFIP2,LRRFIP2,GOLGA4,LRRFIP2	9926,9926,76695,9926
chr8:143869532-143869960	chr8	+	143869663	143869999	True	NM_002066,NM_003695	chr8,chr8	+,-	GML,LY6D	46217,-1655
chr20:25370904-25371109	chr20	+	25370921	25371113	True	NM_015600,NM_021067,NM_001042472	chr20,chr20,chr20	-,+,-	ABHD12,GINS1,ABHD12	555,17209,555
chr10:5452642-5453876	chr10	+	5452828	5453925	True	NM_001047160,NM_001171864,NM_024803	chr10,chr10,chr10	+,-,-	NET1,TUBAL3,TUBAL3	592,-6035,-6035
chr7:20869959-20871043	chr7	+	20870126	20870990	True	NM_198956,NR_026673	chr7,chr7	-,+	SP8,RPL23P8	-43618,-3263
chr18:75682326-75684268	chr18	+	75682637	75684230	True	NM_001480,NM_001025100	chr18,chr18	+,-	GALR1,MBP	-720680,-837863
chr11:102672316-102673746	chr11	+	102672518	102673486	True	NM_001080463,NM_002421,NM_001145938	chr11,chr11,chr11	+,-,-	DYNC2H1,MMP1,MMP1	306673,-3552,-3552
chr3:157186286-157187955	chr3	+	157186734	157187998	True	NM_002852,NM_001167917	chr3,chr3	+,-	PTX3,VEPH1	-32206,25352
chr3:12408516-12409135	chr3	+	12408656	12409046	True	NM_001195279,NM_015869	chr3,chr3	-,+	LOC100129480,PPARG	177967,-15720
chr12:119419905-119421882	chr12	+	119420233	119421896	True	NR_024246,NM_194286	chr12,chr12	-,+	LOC144742,SRRM4	319340,-984
chr10:98504132-98504594	chr10	+	98504165	98504384	True	NM_152309,NM_001170765	chr10,chr10	-,+	PIK3AP1,LCOR	-23886,87632
chr12:1730960-1731367	chr12	+	1731016	1731276	True	NM_032642,NM_030775,NM_152441	chr12,chr12,chr12	+,+,-	WNT5B,WNT5B,FBXL14	7135,-4852,-27685
chr11:67241576-67242926	chr11	+	67241680	67242288	True	NM_001078651,NM_001078650,NM_025124,NM_003977	chr11,chr11,chr11,chr11	-,-,-,+	TMEM134,TMEM134,TMEM134,AIP	-4949,-4949,-4949,8216
chr8:74002764-74004106	chr8	+	74002848	74004048	True	NM_153225,NM_017489	chr8,chr8	-,+	C8orf84,TERF1	1509,-81802
chr5:95769061-95770267	chr5	+	95769129	95770244	True	NM_001190442,NM_001177875,NM_000439	chr5,chr5,chr5	+,-,-	CAST,PCSK1,PCSK1	227496,-1266,-144
chr4:40062158-40063829	chr4	+	40062517	40062765	True	NR_027277,NM_018177	chr4,chr4	-,+	LOC344967,N4BP2	-3698,-4053
chr9:95079135-95079387	chr9	+	95079135	95079243	True	NR_024020,NM_001012267,NM_017948	chr9,chr9,chr9	-,+,-	NOL8,CENPP,NOL8	8695,8497,8695
chr2:91935591-91935961	chr12	-	123892208	123892574	False	NM_020382,NM_145058	chr12,chr12	+,-	SETD8,RILPL2	-23555,28740
chr2:91935591-91935961	chr2	+	91935606	91936007	True	NR_003503,NR_027238	chr2,chr2	+,-	GGT8P,LOC654342	27360,-87631
chr11:206031-207126	chr11	+	206162	206875	True	NM_016526,NM_001098787,NM_021932,NM_053280	chr11,chr11,chr11,chr11	-,-,+,+	BET1L,BET1L,RIC8A,ODF3	598,598,1654,-9452
chr2:75906455-75906883	chr2	+	75906455	75906931	True	NM_001201334,NM_014763	chr2,chr2	-,+	C2orf3,MRPL19	30851,-32602
chr10:13141142-13141464	chr10	+	13141241	13141510	True	NM_031455,NM_021980,NM_001008212,NM_001008213,NM_001008211	chr10,chr10,chr10,chr10,chr10	-,+,+,+,+	CCDC3,OPTN,OPTN,OPTN,OPTN	-97537,571,571,571,571
chr17:66923693-66925322	chr17	+	66923693	66925279	True	NM_007168,NM_212472	chr17,chr17	-,+	ABCA8,PRKAR1A	26304,-415202
chr19:39973222-39973532	chr19	+	39973480	39973562	True	NM_001001563,NM_001020	chr19,chr19	+,-	TIMM50,RPS16	-2479,-46862
chr19:40813094-40813795	chr19	+	40813553	40813648	True	NM_001031696,NM_001626	chr19,chr19	+,-	PLD3,AKT2	40683,-22288
chr1:28104320-28105056	chr1	+	28104463	28104894	True	NM_177424,NM_022873	chr1,chr1	+,-	STX12,IFI6	-4821,-105739
chr21:34910374-34911245	chr21	+	34910567	34911095	True	NM_175085,NM_138927,NM_000819,NM_001136005,NM_032195,NM_001136006	chr21,chr21,chr21,chr21,chr21,chr21	-,+,-,-,+,-	GART,SON,GART,GART,SON,GART	3423,4254,3423,4154,4254,4157
chr3:150126020-150126246	chr3	+	150126045	150126275	True	NM_014445,NM_014779	chr3,chr3	-,+	SERP1,TSC22D2	138203,512
chr2:74780830-74781189	chr2	+	74780834	74781074	True	NM_001197260,NM_001381,NM_032603	chr2,chr2,chr2	+,+,-	DOK1,DOK1,LOXL3	-4738,437,38
chr13:36788527-36788730	chr13	+	36788547	36788689	True	NM_017826,NM_001111046	chr13,chr13	-,+	SOHLH2,CCNA1	113,217277
chr10:104473152-104473594	chr10	+	104473203	104473435	True	NM_178858,NM_004311	chr10,chr10	+,-	SFXN2,ARL3	862,805
chr8:75233273-75233535	chr8	+	75233361	75233527	True	NM_018972,NM_020647	chr8,chr8	+,-	GDAP1,JPH1	29090,85
chr19:787211-787423	chr19	+	787410	787462	True	NM_024888,NM_175847,NM_031991,NM_031990,NM_002819	chr19,chr19,chr19,chr19,chr19	-,+,+,+,+	LPPR3,PTBP1,PTBP1,PTBP1,PTBP1	34540,9929,9929,9929,9929
chr12:122651386-122652452	chr12	+	122651455	122652270	True	NM_152759,NM_001014336	chr12,chr12	+,-	LRRC43,IL31	-5,6533
chr19:52640598-52642470	chr19	+	52640820	52642369	True	NM_014225,NM_178523	chr19,chr19	+,-	PPP2R1A,ZNF616	50685,880
chr13:23711330-23711822	chr13	+	23711381	23711678	True	NM_000231,NR_033774	chr13,chr13	+,-	SGCG,BASP1P1	43381,-239061
chr3:183855841-183856656	chr3	+	183855957	183856048	True	NM_003907,NM_005787	chr3,chr3	+,-	EIF2B5,ALG3	-3199,110762
chr4:85815957-85817330	chr4	+	85816333	85817053	True	NM_014991,NR_015359	chr4,chr4	-,+	WDFY3,NCRNA00247	70549,70917
chr14:60977298-60977712	chr14	+	60977340	60977686	True	NM_007374,NM_174978	chr14,chr14	+,-	SIX6,C14orf39	-1453,-24576
chrX:141292077-141292839	chrX	+	141292182	141292784	True	NM_005462,NM_016249	chrX,chrX	+,-	MAGEC1,MAGEC2	-300591,342
chr16:70556059-70557204	chr16	+	70556380	70557162	True	NM_015386,NM_012426,NR_003696,NR_037420,NM_001195139	chr16,chr16,chr16,chr16,chr16	-,+,+,+,-	COG4,SF3B3,SNORD111B,MIR3647,COG4	345,528,6242,6239,345
chr3:49506128-49506589	chr3	+	49506428	49506560	True	NM_001177639,NM_001177638,NM_001177635,NM_001177634,NM_001177637,NM_001177636,NM_004393,NM_001165928,NM_032316,NM_001177644,NM_001177640,NM_001177641,NM_001177642,NM_001177643	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,+,+,+,+,-,+,+,+,+,+	DAG1,DAG1,DAG1,DAG1,DAG1,DAG1,DAG1,DAG1,NICN1,DAG1,DAG1,DAG1,DAG1,DAG1	1004,1004,1004,1004,1004,1004,1004,1004,-39671,1004,1004,1004,1004,-342
chr18:71818314-71819182	chr18	+	71818356	71819030	True	NM_014177,NM_152676,NM_001142958	chr18,chr18,chr18	+,-,-	C18orf55,FBXO15,FBXO15	-2661,-3357,-3256
chr6:52660540-52662311	chr6	+	52660544	52662213	True	NM_145740,NM_014051	chr6,chr6	-,+	GSTA1,TMEM14A	6501,-124713
chr3:49978136-49978434	chr3	+	49978208	49978466	True	NM_001167582,NM_005777,NM_032355	chr3,chr3,chr3	+,+,-	RBM6,RBM6,MON1A	-790,-790,-10763
chr11:26694875-26696037	chr11	+	26694891	26695829	True	NM_178498,NM_203371	chr11,chr11	-,+	SLC5A12,FIBIN	47797,319798
chr19:43912615-43914384	chr19	+	43913096	43914395	True	NM_001130011,NM_014400	chr19,chr19	+,-	TEX101,LYPD3	4639,55486
chr1:104068017-104068455	chr1	+	104068020	104068456	True	NM_001008218,NM_017619	chr1,chr1	-,+	AMY1B,RNPC3	170483,121
chr1:145974734-145976044	chr1	+	145975174	145975810	True	NR_003377,NM_001097616	chr1,chr1	-,+	PDZK1P1,GPR89C	-32555,-91357
chr1:145974734-145976044	chr1	+	147516908	147517544	False	NR_003377,NM_001097616	chr1,chr1	-,+	PDZK1P1,GPR89C	-32577,-91392
chrY:6312183-6313002	chrY	+	6312193	6312915	True	NR_003590,NR_001535,NR_001534,NR_003588,NR_003592	chrY,chrY,chrY,chrY,chrY	-,+,+,+,+	TTTY2B,TTTY21,TTTY7,TTTY21B,TTTY7B	-15708,-769,4593,-769,4593
chrY:6312183-6313002	chrY	-	9557464	9558186	False	NR_001536,NR_001535,NR_001534,NR_003588,NR_003592	chrY,chrY,chrY,chrY,chrY	+,-,-,-,-	TTTY2,TTTY21,TTTY7,TTTY21B,TTTY7B	15708,769,-4593,769,-4593
chr19:54107988-54109444	chr19	+	54108132	54109492	True	NM_001012728,NR_002938	chr19,chr19	+,-	DPRX,LOC284379	25817,-1381
chr16:30392783-30393169	chr16	+	30392860	30393054	True	NM_013292,NM_052838	chr16,chr16	+,-	MYLPF,SEPT1	-6788,1167
chr4:166200829-166202558	chr4	+	166200870	166202226	True	NM_001017369,NR_026575	chr4,chr4	+,-	SC4MOL,GK3P	46591,-173
chr19:18434109-18435002	chr19	+	18434122	18434830	True	NM_017712,NM_012321	chr19,chr19	+,-	PGPEP1,LSM4	16577,-121
chr6:129206587-129207210	chr6	+	129206674	129207241	True	NM_001135648,NM_001079823,NM_000426	chr6,chr6,chr6	-,+,+	PTPRK,LAMA2,LAMA2	-364804,-2439,-2439
chrX:40505768-40506175	chrX	+	40505791	40506103	True	NM_144970,NM_001195522	chrX,chrX	-,+	CXorf38,LOC347411	766,-23024
chr1:221057806-221058068	chr1	+	221057865	221058115	True	NM_021958,NR_024236	chr1,chr1	+,-	HLX,LOC400804	-5173,451573
chrX:12924027-12924307	chrX	+	12924063	12924349	True	NM_138636,NR_030727	chrX,chrX	+,-	TLR8,LOC349408	389,37120
chr7:12671846-12673830	chr7	+	12672147	12673773	True	NM_033128,NM_001135924	chr7,chr7	+,-	SCIN,VWDE	-43052,-228295
chr8:17943410-17944601	chr8	+	17943457	17944481	True	NM_177924,NM_001127505,NM_004315,NM_001160179	chr8,chr8,chr8,chr8	-,-,-,+	ASAH1,ASAH1,ASAH1,NAT1	-1578,-950,-950,83489
chr1:219651061-219651813	chr1	+	219651061	219651829	True	NM_138794,NM_018713	chr1,chr1	+,-	LYPLAL1,SLC30A10	-303927,450214
chr4:37585658-37585981	chr4	+	37585681	37586029	True	NM_018302,NM_001085399	chr4,chr4	+,-	C4orf19,RELL1	-35,102020
chr19:8841548-8842272	chr19	+	8841712	8842302	True	NM_178525,NM_001004699	chr19,chr19	-,+	ACTL9,OR2Z1	-32540,-372
chr3:126114666-126114899	chr3	+	126114761	126114911	True	NM_182628,NM_014079	chr3,chr3	+,-	CCDC37,KLF15	-1030,-38525
chr11:60737990-60738834	chr11	+	60738051	60738855	True	NR_027391,NM_006725	chr11,chr11	-,+	SLC15A3,CD6	-18794,259
chr2:202686041-202686562	chr2	+	202686048	202686390	True	NM_001135745,NM_139158	chr2,chr2	-,+	ALS2,CDK15	-40153,-14901
chr15:77165474-77166324	chr15	+	77165838	77166168	True	NM_002902,NM_020843	chr15,chr15	+,-	RCN2,SCAPER	57793,10107
chr10:104597357-104597920	chr10	+	104597411	104597870	True	NM_000102,NM_001136200	chr10,chr10	-,+	CYP17A1,C10orf32	-121,16096
chrY:4978331-4979297	chrY	+	4978569	4979025	True	NM_032973,NR_001540	chrY,chrY	+,-	PCDH11Y,TTTY23	-54497,1132686
chrY:4978331-4979297	chrX	+	91144075	91144203	False	NM_001168363,NM_004538	chrX,chrX	+,-	PCDH11X,NAP1L3	-53680,1784539
chrX:118531853-118532152	chrX	+	118531952	118532187	True	NM_145305,NR_028443	chrX,chrX	+,-	SLC25A43,LOC100303728	1070,70946
chr18:47091874-47092990	chr18	+	47092047	47092951	True	NM_001035006,NM_006033	chr18,chr18	-,+	RPL17,LIPG	-73112,-3671
chr7:141720552-141720783	chr7	+	141720759	141720831	True	NM_004668,NM_176817	chr7,chr7	+,-	MGAM,TAS2R38	-25131,-47186
chr9:73660686-73661060	chr9	+	73660685	73660909	True	NM_015110,NM_001007471	chr9,chr9	+,-	SMC5,TRPM3	-786866,75663
chr1:1570003-1570537	chr1	+	1570003	1570383	True	NM_001110781,NM_006983,NR_002946	chr1,chr1,chr1	-,+,+	SLC35E2B,MMP23B,MMP23A	53910,-2494,-1895
chr1:1570003-1570537	chr1	+	1633553	1633603	False	NM_001110781,NR_002946	chr1,chr1	-,+	SLC35E2B,MMP23A	-9310,-2226
chr11:6413100-6414477	chr11	+	6413157	6414437	True	NM_000543,NM_001164,NM_001007593	chr11,chr11,chr11	+,-,+	SMPD1,APBB1,SMPD1	-1564,25913,-1564
chr16:89288429-89290307	chr16	+	89288619	89289850	True	NR_037705,NM_001201407,NM_005187,NM_182531	chr16,chr16,chr16,chr16	+,+,-,+	ZNF778,ZNF778,CBFA2T3,ZNF778	-4566,-4566,-245115,-4566
chr20:6195178-6195900	chr20	+	6195309	6195721	True	NM_001127458,NM_017671	chr20,chr20	+,-	CRLS1,FERMT1	-207462,-91118
chr20:3047580-3048296	chr20	+	3047792	3048150	True	NM_000490,NM_000915	chr20,chr20	-,+	AVP,OXT	17278,4115
chr10:38300425-38300975	chr10	+	38300576	38300796	True	NM_006974,NM_145011,NM_006954	chr10,chr10,chr10	+,-,+	ZNF33A,ZNF25,ZNF33A	-1056,-35123,-1056
chr4:15482434-15484064	chr4	+	15482461	15483821	True	NM_001193534,NM_001080522	chr4,chr4	-,+	FBXL5,CC2D2A	173270,-11023
chr7:105222022-105222673	chr7	+	105222157	105222296	True	NR_027068,NM_021930	chr7,chr7	-,+	EFCAB10,RINT1	-181,-49677
chr22:20613972-20614834	chr22	+	20613981	20614883	True	NM_015672,NM_003426	chr22,chr22	-,+	RIMBP3,ZNF74	-152195,133596
chr22:20613972-20614834	chr22	-	18762670	18763554	False	NM_017414,NM_005675,NR_003267	chr22,chr22,chr22	+,+,-	USP18,DGCR6,GGT3P	-129963,130181,15970
chr22:20613972-20614834	chr22	+	22988049	22988354	False	NM_199127,NR_024591	chr22,chr22	+,-	GGTLC2,POM121L1P	427,-1037
chr22:20613972-20614834	chr22	-	21563763	21563813	False	NR_024583,NR_002829	chr22,chr22	+,-	POM121L8P,P2RX6P	72900,-165225
chr22:20613972-20614834	chr22	-	20367704	20368049	False	NR_003563,NR_026919	chr22,chr22	-,+	PI4KAP1,LOC150197	30696,-173900
chr14:104030412-104030810	chr14	+	104030549	104030813	True	NM_032374,NM_001015049,NM_001015048,NM_004873	chr14,chr14,chr14,chr14	+,-,-,-	C14orf153,BAG5,BAG5,BAG5	-1310,-1894,-1398,-1894
chr1:20309333-20310198	chr1	+	20309502	20310209	True	NM_000300,NM_001161728,NM_000929,NM_001161729,NM_001161727	chr1,chr1,chr1,chr1,chr1	-,-,+,-,-	PLA2G2A,PLA2G2A,PLA2G5,PLA2G2A,PLA2G2A	-2570,-2570,86491,-3350,-2570
chr8:145065238-145065454	chr8	+	145065290	145065366	True	NM_000837,NM_032789,NM_001009184	chr8,chr8,chr8	+,-,+	GRINA,PARP10,GRINA	-1115,-4655,-1115
chr1:59096705-59097130	chr2	+	32048631	32048681	True	NM_014946,NM_001137602	chr2,chr2	+,-	SPAST,MEMO1	239998,187067
chr1:59096705-59097130	chr1	+	59096711	59097145	False	NM_002353,NR_034014	chr1,chr1	-,+	TACSTD2,LOC100131060	-53545,153677
chr1:59096705-59097130	chr1	+	33480132	33480182	False	NM_052998,NR_037591	chr1,chr1	+,-	ADC,AK2	66531,22380
chr19:14143540-14145485	chr19	+	14143682	14145101	True	NM_004843,NM_001145028,NM_080864	chr19,chr19,chr19	+,-,+	IL27RA,PALM3,RLN3	-1471,24930,-4716
chr17:4800965-4801189	chr17	+	4801033	4801098	True	NM_000080,NM_001145536	chr17,chr17	-,+	CHRNE,C17orf107	5322,1849
chr8:67931766-67932594	chr8	+	67931819	67932325	True	NM_024790,NM_001013626	chr8,chr8	+,-	CSPP1,LRRC67	44277,8520
chr9:101989015-101990233	chr9	+	101989106	101990042	True	NM_006808,NR_024532,NM_033087	chr9,chr9,chr9	+,-,-	SEC61B,ALG2,ALG2	-4587,-4860,-4860
chr2:27195158-27196461	chr2	+	27195187	27196393	True	NM_012326,NM_001134693	chr2,chr2	+,-	MAPRE3,OST4	-1713,98232
chr1:1242362-1242845	chr1	+	1242456	1242594	True	NM_030649,NM_153339	chr1,chr1	-,+	ACAP3,PUSL1	725,1399
chr16:30022985-30023319	chr16	+	30023018	30023286	True	NM_003586,NM_001109659	chr16,chr16	-,+	DOC2A,C16orf92	-617,11368
chr11:67712360-67714239	chr11	+	67712719	67713927	True	NM_030930,NM_001161473	chr11,chr11	-,+	UNC93B1,ALDH3B1	57716,62120
chr17:62951917-62952658	chr17	+	62952147	62952685	True	NR_026903,NM_001165933	chr17,chr17	-,+	AMZ2P1,RGS9	19068,180770
chr17:62951917-62952658	chr17	-	66265218	66265756	False	NM_014960,NM_001174166	chr17,chr17	+,-	ARSG,SLC16A6	-9946,21700
chr3:196470438-196472076	chr3	+	196470939	196471928	True	NM_032898,NM_002577	chr3,chr3	-,+	C3orf34,PAK2	-31816,-4262
chr22:17489642-17489970	chr22	+	17489665	17489979	True	NR_015352,NM_001037814	chr22,chr22	+,-	CECR7,GAB4	27480,-553
chr9:135996905-135998620	chr9	+	135996935	135998481	True	NR_001275,NM_006266	chr9,chr9	+,-	CELP,RALGDS	-39060,-374
chr7:45807896-45808143	chr7	+	45808064	45808126	True	NR_024271,NM_000596	chr7,chr7	-,+	SEPT7P2,IGFBP1	541,119832
chr1:179048892-179049899	chr1	+	179049018	179049934	True	NM_022371,NM_001136000	chr1,chr1	+,-	TOR3A,ABL2	1177,62340
chr2:24164181-24164663	chr2	+	24164293	24164644	True	NM_181713,NM_017552	chr2,chr2	+,-	UBXN2A,ATAD2B	-976,-14359
chr21:45711567-45711879	chr21	+	45711763	45711827	True	NR_024108,NM_000658,NM_000383,NM_175867,NM_002626	chr21,chr21,chr21,chr21,chr21	+,+,+,-,+	PFKL,AIRE,AIRE,DNMT3L,PFKL	8097,-1540,-6051,-29664,8102
chr21:44747211-44748384	chr21	+	44747311	44748401	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	121502,98651
chr8:17431350-17431871	chr8	+	17431432	17431651	True	NM_020749,NM_006207	chr8,chr8	-,+	MTUS1,PDGFRL	123652,2290
chr14:29253397-29253723	chr14	+	29253396	29253763	True	NM_002742,NR_026731	chr14,chr14	-,+	PRKD1,C14orf23	1143191,-11548
chr7:44917325-44918798	chr7	+	44917436	44918465	True	NM_033224,NM_021130	chr7,chr7	-,+	PURB,PPIA	6550,-81247
chr4:1283645-1283846	chr4	+	1283676	1283774	True	NM_001328,NM_001017405,NM_005882	chr4,chr4,chr4	-,+,+	CTBP1,MAEA,MAEA	-40768,-55,-55
chr22:21088144-21088359	chr22	+	21088179	21088239	True	NM_002650,NR_026815	chr22,chr22	-,+	PI4KA,TMEM191A	766,-32828
chr22:21088144-21088359	chr22	+	20398033	20398093	False	NR_003563,NR_026919	chr22,chr22	-,+	PI4KAP1,LOC150197	652,-204229
chr22:21088144-21088359	chr22	+	21842009	21842069	False	NM_015094,NR_003700	chr22,chr22	+,-	HIC2,PI4KAP2	-70367,29761
chr12:93410582-93412000	chr12	+	93410969	93412038	True	NM_001004330,NM_003566	chr12,chr12	+,-	PLEKHG7,EEA1	-280755,-87862
chr10:79396251-79396479	chr10	+	79396309	79396389	True	NR_024585,NM_001014797,NM_001161353,NM_001161352,NM_002247	chr10,chr10,chr10,chr10,chr10	+,-,-,-,-	LOC100128292,KCNMA1,KCNMA1,KCNMA1,KCNMA1	290180,1238,1238,1238,1238
chr12:45463807-45464520	chr12	+	45463814	45464510	True	NM_001025356,NR_026583	chr12,chr12	+,-	ANO6,RACGAP1P	145259,-4620
chr3:169634358-169635722	chr3	+	169634475	169634962	True	NM_024727,NM_182610	chr3,chr3	-,+	LRRC31,SAMD7	-46815,-5058
chr18:12255393-12255683	chr18	+	12255394	12255662	True	NR_036468,NM_006796,NM_001279	chr18,chr18,chr18	+,-,+	CIDEA,AFG3L2,CIDEA	-1085,121663,-1127
chr2:166185640-166186046	chr2	+	166185666	166186080	True	NM_006922,NM_001040143	chr2,chr2	-,+	SCN3A,SCN2A	-125089,-33434
chr14:31483719-31484192	chr14	+	31483838	31483971	True	NM_007077,NR_030354	chr14,chr14	+,-	AP4S1,MIR624	10711,36
chr11:60690596-60691878	chr11	+	60690767	60691765	True	NM_014502,NM_017870,NM_024092,NM_178031	chr11,chr11,chr11,chr11	-,+,+,+	PRPF19,TMEM132A,TMEM109,TMEM132A	-16706,147,-9463,147
chr6:38696883-38698690	chr6	+	38697031	38698558	True	NM_006708,NM_001371	chr6,chr6	-,+	GLO1,DNAH8	-26079,-6537
chr4:69240588-69242086	chr4_ctg9_hap1	+	70930	71836	False	NM_014058,NM_133370	chr4_ctg9_hap1,chr4_ctg9_hap1	+,-	TMPRSS11E,YTHDC1	71252,-25184
chr4:69240588-69242086	chr4	+	69241008	69241914	True	NM_014058,NM_133370	chr4,chr4	+,-	TMPRSS11E,YTHDC1	71252,-25184
chr10:5454128-5454353	chr10	+	5454130	5454370	True	NM_001047160,NM_001171864,NM_024803	chr10,chr10,chr10	+,-,-	NET1,TUBAL3,TUBAL3	147,-7337,-7337
chr7:133825016-133826159	chr7	+	133825305	133826060	True	NM_032826,NM_144648	chr7,chr7	-,+	SLC35B4,LRGUK	175817,-13263
chr3:37905105-37906151	chr3	+	37905285	37906199	True	NM_005808,NM_001008392,NM_001130964	chr3,chr3,chr3	+,+,-	CTDSPL,CTDSPL,PLCD1	-1667,-1667,160137
chr12:133561951-133562897	chr12	+	133562221	133562939	True	NM_019591,NM_001164715	chr12,chr12	+,-	ZNF26,ZNF605	116,-29329
chr11:65342371-65342591	chr11	+	65342446	65342618	True	NM_001099409,NM_006396,NM_152832,NM_021070,NM_001098785,NM_001098784	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,-,+,+	EHBP1L1,SSSCA1,FAM89B,LTBP3,FAM89B,FAM89B	890,-4554,-2677,-16747,-2677,-2677
chr5:138084073-138084887	chr5	+	138084216	138084536	True	NM_015564,NM_001903	chr5,chr5	-,+	LRRTM2,CTNNA1	126571,4570
chr18:77440325-77441037	chr18	+	77440457	77440997	True	NM_004715,NM_048368,NM_001202504,NM_001146343	chr18,chr18,chr18,chr18	+,+,+,-	CTDP1,CTDP1,CTDP1,PQLC1	-707,-707,432,270706
chr14:76052113-76053047	chr14	+	76052389	76053094	True	NM_017791,NM_007176	chr14,chr14	+,-	FLVCR2,C14orf1	-7500,74494
chr17:77752822-77753176	chr17	+	77752880	77753198	True	NM_005189,NM_020649,NM_032647	chr17,chr17,chr17	+,-,+	CBX2,CBX8,CBX2	-954,17767,-954
chr15:80707422-80707940	chr15	+	80707428	80707910	True	NM_014862,NR_033833	chr15,chr15	+,-	ARNT2,LOC283688	-10788,-73281
chr7:76169576-76170905	chr7	+	76170610	76170744	True	NR_029411,NR_003262	chr7,chr7	+,-	LOC100133091,FDPSL2A	7913,-66293
chrX:150678499-150679568	chrX	+	150678552	150679405	True	NR_029973,NM_173493	chrX,chrX	-,+	MIR452,PASD1	448830,52601
chr16:1346057-1346615	chr16	+	1346444	1346525	True	NM_194261,NM_001001410	chr16,chr16	+,-	UBE2I,C16orf42	12654,55401
chr19:12910467-12910967	chr19	+	12910474	12910798	True	NM_002229,NM_005809,NM_181738,NM_006397	chr19,chr19,chr19,chr19	+,-,-,+	JUNB,PRDX2,PRDX2,RNASEH2A	-8216,1946,1946,6629
chr3:141942400-141942893	chr3	+	141942728	141942920	True	NM_001679,NM_001039547,NR_033289	chr3,chr3,chr3	+,-,-	ATP1B3,GK5,GK5	-347309,1579,1579
chr22:29978283-29979588	chr22	+	29978725	29979143	True	NM_181825,NM_001202502,NM_003634	chr22,chr22,chr22	+,-,-	NF2,NIPSNAP1,NIPSNAP1	20401,-1640,-1399
chr8:42011225-42012343	chr8	+	42011325	42012234	True	NM_006803,NM_001134296,NM_000930	chr8,chr8,chr8	+,+,-	AP3M2,AP3M2,PLAT	-914,-914,53010
chr2:109068390-109068825	chr2	+	109068509	109068740	True	NR_028063,NM_022336,NM_181453	chr2,chr2,chr2	+,-,+	GCC2,EDAR,GCC2	-2990,537155,-2990
chr17:58603713-58604895	chr17	+	58603818	58604664	True	NM_006380,NM_003620	chr17,chr17	-,+	APPBP2,PPM1D	-238,72879
chr13:33107020-33108955	chr13	+	33107396	33108572	True	NM_014887,NM_015032,NM_033111	chr13,chr13,chr13	-,+,-	N4BP2L2,PDS5B,N4BP2L2	4417,51991,4421
chr19:41817686-41818774	chr19	+	41817839	41818555	True	NM_052848,NM_000660	chr19,chr19	+,-	CCDC97,TGFB1	-1796,41326
chr4:185396159-185397139	chr4	+	185396262	185397037	True	NM_002199,NM_152683	chr4,chr4	-,+	IRF2,CCDC111	-536,173729
chr15:82339284-82339484	chr15	+	82339285	82339475	True	NM_032246,NM_001008226	chr15,chr15	-,+	MEX3B,FAM154B	-924,215676
chr4:56474057-56475036	chr4	+	56474608	56474996	True	NM_152401,NR_003935	chr4,chr4	-,+	PDCL2,LOC644145	-16229,211240
chr11:43716954-43717845	chr11	+	43717173	43717855	True	NR_033868,NM_016142	chr11,chr11	-,+	LOC399881,HSD17B12	-426254,-15091
chr10:111766978-111767337	chr10	+	111767177	111767243	True	NM_001121,NM_019903,NR_030724,NM_016824	chr10,chr10,chr10,chr10	+,+,-,+	ADD3,ADD3,XPNPEP1,ADD3	467,-1502,-83866,467
chr11:62552957-62554065	chr11	+	62552957	62554015	True	NM_199337,NM_001080501	chr11,chr11	+,-	TMEM179B,TMEM223	858,5521
chr19:7768389-7768954	chr19	+	7768660	7768868	True	NM_001042461,NM_002002	chr19,chr19	+,-	TRAPPC5,FCER2	-22947,-1628
chr14:51031289-51031862	chr14	+	51031403	51031695	True	NM_181598,NM_015915,NM_198794	chr14,chr14,chr14	+,+,-	ATL1,ATL1,MAP4K5	-4716,-4716,-32027
chr8:38585917-38586299	chr8	+	38585954	38586338	True	NM_001146216,NR_003129	chr8,chr8	+,-	TACC1,RNF5P1	-303,-127179
chr14:50582455-50582695	chr14	+	50582501	50582609	True	NM_024558,NM_001040662,NM_015684	chr14,chr14,chr14	-,-,+	METTL21D,METTL21D,ATP5S	738,738,196437
chr2:74687662-74689154	chr2	+	74687993	74689153	True	NM_001146158,NM_006302,NM_031288,NM_012477,NR_037849	chr2,chr2,chr2,chr2,chr2	-,-,+,+,+	MOGS,MOGS,INO80B,WBP1,INO80B-WBP1	3434,3434,-5894,-2517,-5894
chr7:130789584-130790326	chr7	+	130789704	130790342	True	NR_015431,NM_001145354,NR_024153	chr7,chr7,chr7	-,+,-	FLJ43663,MKLN1,FLJ43663	3270,4512,1497
chr20:54967432-54967757	chr20	+	54967534	54967730	True	NM_003600,NM_198433,NM_198434,NM_198435,NM_198436,NM_198437,NM_001033522,NM_001033521,NM_001324	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	-,-,-,-,-,-,+,+,+	AURKA,AURKA,AURKA,AURKA,AURKA,AURKA,CSTF1,CSTF1,CSTF1	-183,-183,-183,-183,-183,-183,-24,-158,-11
chr4:100137235-100138283	chr4	+	100137234	100138116	True	NM_000672,NM_001102470,NR_037884	chr4,chr4,chr4	-,-,+	ADH6,ADH6,LOC100507053	2346,2346,-127285
chr20:46756048-46756460	chr20	+	46756316	46756470	True	NR_026958,NM_198596	chr20,chr20	+,-	LOC284749,SULF2	232183,-340956
chr12:50615409-50616432	chr12	+	50615416	50616307	True	NM_032901,NM_001113547	chr12,chr12	+,-	C12orf62,LIMA1	-109567,238
chr19:2944888-2945219	chr19	+	2944981	2945219	True	NM_021217,NM_001143986	chr19,chr19	-,+	ZNF77,TLE6	-12,32316
chr1:22958422-22958973	chr1	+	22958421	22958959	True	NM_015991,NR_036214	chr1,chr1	+,-	C1QA,MIR4253	4158,230818
chr1:145578234-145578462	chr1	+	145578397	145578511	True	NM_006099,NM_001012758	chr1,chr1	+,-	PIAS3,NUDT17	-2460,10974
chr14:50858191-50859269	chr14	+	50858430	50859286	True	NR_033761,NM_004196	chr14,chr14	+,-	ATP5S,CDKL1	-79434,3381
chr17:27347385-27347648	chr17	+	27347633	27347697	True	NM_178860,NM_016518	chr17,chr17	-,+	SEZ6,PIPOX	-14552,22220
chr9:131181174-131182020	chr9	+	131181223	131181963	True	NR_029837,NM_016174	chr9,chr9	-,+	MIR219-2,CERCAM	-26230,795
chr5:56592720-56593210	chr5	+	56592726	56593131	True	NM_001127236,NM_001017992	chr5,chr5	+,-	GPBP1,ACTBL2	-82876,185562
chr6:150069799-150070298	chr6	+	150069996	150070176	True	NM_005389,NM_198887	chr6,chr6	+,-	PCMT1,NUP43	654,-2308
chr22:39078028-39078375	chr22	+	39078148	39078418	True	NM_014876,NM_020243	chr22,chr22	-,+	JOSD1,TOMM22	18091,-245
chr9:95708523-95709526	chr9	+	95708975	95709553	True	NM_001083536,NM_031486	chr9,chr9	+,-	FGD3,ZNF484	47,-68685
chr5:171435011-171435895	chr5	+	171435263	171435860	True	NM_012300,NM_001171183,NM_033645,NM_033644	chr5,chr5,chr5,chr5	-,+,-,-	FBXW11,EFCAB9,FBXW11,FBXW11	-1386,185315,-1386,-1386
chr4:176891355-176892451	chr4	+	176891417	176892489	True	NM_170710,NM_005277	chr4,chr4	+,-	WDR17,GPM6A	94495,31209
chr3:121556309-121556698	chr3	+	121556450	121556739	True	NM_001023570,NM_001023571,NM_018456	chr3,chr3,chr3	-,-,+	IQCB1,IQCB1,EAF2	-2524,-2524,-2476
chr5:140012736-140014229	chr5	+	140012745	140014021	True	NM_001040021,NM_000591,NM_018502,NM_001174104,NM_001174105	chr5,chr5,chr5,chr5,chr5	-,-,+,-,-	CD14,CD14,TMCO6,CD14,CD14	121,-12,4990,121,121
chr12:119617654-119617916	chr12	+	119617816	119617938	True	NR_024246,NM_014365	chr12,chr12	-,+	LOC144742,HSPB8	123297,-1275
chr19:33792205-33792462	chr19	+	33792311	33792505	True	NR_026887,NM_004364	chr19,chr19	+,-	LOC80054,CEBPA	1257,975
chr6:14814085-14814760	chr6	+	14814090	14814428	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	432098,848911
chr10:6349726-6351411	chr10	+	6349759	6351211	True	NM_004566,NM_000417	chr10,chr10	+,-	PFKFB3,IL2RA	-104970,-245426
chr11:12412705-12413273	chr11	+	12412746	12413308	True	NM_018222,NM_013253	chr11,chr11	+,-	PARVA,DKK3	-13771,-381829
chr4:170712916-170713181	chr4	+	170712981	170713173	True	NM_173872,NM_017867	chr4,chr4	+,-	CLCN3,C4orf27	-171311,-33888
chr19:48965118-48965458	chr19	+	48965125	48965457	True	NM_013348,NM_017457,NM_004228,NM_001080434,NM_170720	chr19,chr19,chr19,chr19,chr19	+,+,+,-,+	KCNJ14,CYTH2,CYTH2,LMTK3,KCNJ14	-6410,7007,7007,51039,-670
chr18:47792394-47792615	chr18	+	47792393	47792582	True	NM_145020,NM_001039535	chr18,chr18	-,+	CCDC11,SKA1	334,108809
chr4:170948078-170948446	chr4	+	170948081	170948361	True	NM_173872,NM_021647	chr4,chr4	+,-	CLCN3,MFAP3L	-406410,-652
chr4:22744647-22745129	chr4	+	22744860	22745166	True	NM_145290,NM_020973	chr4,chr4	-,+	GPR125,GBA3	-227188,-50378
chr8:37454015-37454324	chr8	+	37454276	37454345	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	98955,151278
chr5:70317544-70319309	chr5	+	70317638	70319170	True	NM_004536,NM_022892,NM_022877	chr5,chr5,chr5	-,-,+	NAIP,NAIP,SMN2	1821,1821,-96928
chr5:70317544-70319309	chr5	-	68900357	68901889	False	NR_027439,NM_001042490	chr5,chr5	-,+	LOC100272216,GTF2H2D	27196,-44334
chr5:70317544-70319309	chr5	-	69755501	69757033	False	NR_033417,NR_033968	chr5,chr5	+,-	GTF2H2B,LOC100049076	-44355,94174
chr2:241631091-241631443	chr2	+	241631221	241631471	True	NM_198998,NM_001102467	chr2,chr2	+,-	AQP12A,AQP12B	-10,-8904
chr2:241631091-241631443	chr2	-	241622129	241622363	False	NM_198998,NM_001102467	chr2,chr2	+,-	AQP12A,AQP12B	8898,106
chr12:124153857-124155030	chr12	+	124154034	124154508	True	NM_001414,NM_024809,NM_001143850	chr12,chr12,chr12	-,+,+	EIF2B1,TCTN2,TCTN2	-35711,1151,1151
chr21:37909434-37910834	chr21	+	37909568	37910686	True	NM_005441,NM_001146078	chr21,chr21	+,-	CHAF1B,CLDN14	-151937,4262
chr18:60195686-60197071	chr18	+	60195885	60196968	True	NM_176787,NM_017742	chr18,chr18	-,+	PIGN,ZCCHC2	-341596,-5287
chr1:207225726-207226127	chr1	+	207226068	207226170	True	NM_001018053,NM_018566,NM_006212	chr1,chr1,chr1	+,-,+	PFKFB2,YOD1,PFKFB2	449,-1646,449
chr20:23970499-23971066	chr20	+	23970503	23971025	True	NM_178312,NM_178311,NR_001279	chr20,chr20,chr20	-,-,+	GGTLC1,GGTLC1,CSTT	-2991,-1087,-470771
chr16:56669608-56670368	chr16	+	56669667	56670347	True	NR_003658,NR_036677,NM_176870,NM_005946,NM_005950,NR_027781	chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,-,+	MT1DP,MT1JP,MT1M,MT1A,MT1G,MT1DP	7368,-67,-3184,2230,31680,7251
chr1:113216331-113217063	chr1	+	113216348	113216989	True	NM_001130079,NM_020963,NM_001042679	chr1,chr1,chr1	+,+,-	MOV10,MOV10,RHOC	58,58,32739
chr15:90216864-90217683	chr15	+	90216955	90217481	True	NM_001145311,NM_020212,NM_002666	chr15,chr15,chr15	-,+,-	PLIN1,WDR93,PLIN1	5221,16546,5221
chr6:31081615-31082402	chr6	+	31081706	31082206	True	NM_014068,NM_001264,NM_014070	chr6,chr6,chr6	+,-,-	PSORS1C1,CDSN,C6orf15	401,6096,-1374
chr6:31081615-31082402	chr6_mann_hap4	+	2430063	2430563	False	NM_014068,NM_001264,NM_014070	chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4	+,-,-	PSORS1C1,CDSN,C6orf15	401,6092,-1385
chr6:31081615-31082402	chr6_dbb_hap3	+	2378878	2379378	False	NM_014068,NM_001264,NM_014070	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	+,-,-	PSORS1C1,CDSN,C6orf15	401,6092,-1374
chr6:31081615-31082402	chr6_mcf_hap5	+	2463631	2464131	False	NM_014068,NM_001264,NM_014070	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	+,-,-	PSORS1C1,CDSN,C6orf15	401,6092,-1374
chr6:31081615-31082402	chr6_qbl_hap6	+	2377968	2378024	False	NM_014068,NM_001264,NM_014070	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	+,-,-	PSORS1C1,CDSN,C6orf15	401,6099,-1818
chr6:31081615-31082402	chr6_cox_hap2	+	2596410	2596486	False	NM_014068,NM_001264,NM_014070	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,-,-	PSORS1C1,CDSN,C6orf15	825,6521,-1374
chr8:32505820-32506082	chr8	+	32505825	32506116	True	NM_013959,NM_032664	chr8,chr8	+,-	NRG1,FUT10	-1625,824598
chr5:28809503-28809739	chr5	+	28809557	28809761	True	NM_016279,NR_033961	chr5,chr5	-,+	CDH9,LOC729862	-1770868,117215
chr7:49812144-49812608	chr7	+	49812318	49812653	True	NM_001159878,NM_198570	chr7,chr7	-,+	ZPBP,VWC2	320258,603
chr3:9409671-9410205	chr3	+	9409797	9409877	True	NM_001114092,NM_015453,NR_027007	chr3,chr3,chr3	+,+,-	THUMPD3,THUMPD3,LOC440944	-5139,-5139,29357
chr15:44486307-44486750	chr15	+	44486312	44486650	True	NM_032892,NM_138423	chr15,chr15	-,+	FRMD5,CASC4	829,94258
chr10:30027283-30027632	chr10	+	30027423	30027673	True	NM_003174,NR_003930	chr10,chr10	-,+	SVIL,LOC387647	-2693,-328973
chr4:70366004-70366842	chr4	+	70366400	70366762	True	NM_053039,NM_021139	chr4,chr4	+,-	UGT2B28,UGT2B4	-220234,-4774
chr14:73603672-73604512	chr14	+	73603695	73604467	True	NM_007318,NM_000021,NM_021260	chr14,chr14,chr14	+,+,-	PSEN1,PSEN1,ZFYVE1	-603,-603,-109775
chr16:55807140-55807347	chr16	+	55807155	55807367	True	NR_003276,NM_001025194	chr16,chr16	+,-	CES1P1,CES1	-12695,59758
chr16:55807140-55807347	chr16	-	55854339	55854397	False	NR_003276,NM_001025194	chr16,chr16	+,-	CES1P1,CES1	-59879,12728
chr9:65618710-65619783	chr9	+	65618959	65619691	True	NR_024496,NM_015667	chr9,chr9	+,-	LOC442421,FAM75A7	874577,-109349
chr9:65618710-65619783	chr9	+	43877361	43878093	False	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	-246631,-192534
chr9:65618710-65619783	chr9	-	39116167	39116469	False	NM_033655,NM_001085452	chr9,chr9	-,+	CNTNAP3,FAM75A1	171893,239229
chr9:65618710-65619783	chr9	+	40294402	40295134	False	NR_026803,NM_033160	chr9,chr9	+,-	FAM74A1,ZNF658	-394260,497036
chr2:220381089-220381589	chr2	+	220381192	220381332	True	NM_001195731,NM_018674,NM_182847	chr2,chr2,chr2	-,+,+	CHPF,ACCN4,ACCN4	26537,-2351,-2351
chr1:52338099-52339726	chr1	+	52338511	52339588	True	NM_001101662,NM_148907,NM_002525	chr1,chr1,chr1	-,+,-	NRD1,OSBPL9,NRD1	5072,-143084,5072
chr14:104605782-104606060	chr14	+	104605872	104606014	True	NM_004894,NM_015656	chr14,chr14	-,+	C14orf2,KIF26A	-217969,-863
chr1:35322837-35324772	chr1	+	35323099	35324796	True	NM_001164824,NM_001164825,NM_138428,NM_002060	chr1,chr1,chr1,chr1	-,-,-,+	C1orf212,C1orf212,C1orf212,GJA4	-100,592,671,-64551
chr5:72868914-72869492	chr5	+	72868913	72869036	True	NM_023039,NM_032175	chr5,chr5	-,+	ANKRA2,UTP15	-7402,-7368
chr7:127985998-127987074	chr7	+	127986147	127987016	True	NM_000230,NM_001166135,NM_018077	chr7,chr7,chr7	+,-,-	LEP,RBM28,RBM28	-104875,-2185,-2185
chrX:153722710-153723708	chrX	+	153722769	153723199	True	NM_014235,NM_017514,NM_001142392,NM_019848,NM_001142391	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	UBL4A,PLXNA3,SLC10A3,SLC10A3,SLC10A3	-7837,-36198,-3767,-3767,-3767
chr11:124134712-124136630	chr11	+	124134850	124136398	True	NM_001005198,NM_001002917	chr11,chr11	+,-	OR8G5,OR8D1	-179,44328
chr17:62657706-62657924	chr17	+	62657762	62657824	True	NM_022739,NM_138363	chr17,chr17	-,+	SMURF2,CCDC45	612,-154659
chr20:30551862-30553730	chr20	+	30552074	30553430	True	NM_030815,NM_001011718	chr20,chr20	-,+	PDRG1,XKR7	-12191,2374
chr20:42572145-42573637	chr20	+	42572221	42573614	True	NM_001098798,NM_176791	chr20,chr20	+,-	TOX2,GTSF1L	921,-216579
chr19:56046703-56047630	chr19	+	56046713	56047512	True	NM_001144950,NM_001199824,NM_001101401	chr19,chr19,chr19	+,-,-	SSC5D,LOC100130827,SBK2	-46894,9447,973
chrX:69274514-69275197	chrX	+	69274564	69275059	True	NM_001002254,NM_207320	chrX,chrX	-,+	AWAT2,OTUD6A	-4776,7281
chr5:175977797-175978423	chr5	+	175977802	175978472	True	NM_014901,NM_017675,NM_001171976	chr5,chr5,chr5	-,+,+	RNF44,CDHR2,CDHR2	-13381,-1510,-8341
chr2:208998331-208998671	chr2	+	208998381	208998487	True	NM_020989,NM_006891,NM_001178000	chr2,chr2,chr2	-,-,+	CRYGC,CRYGD,PIKFYVE	-3827,-9068,132503
chr7:27224461-27224952	chr7	+	27224545	27224885	True	NM_005523,NR_002795,NM_153715,NR_037940,NR_037939	chr7,chr7,chr7,chr7,chr7	-,+,-,-,-	HOXA11,HOXA11-AS1,HOXA10,HOXA10-HOXA9,HOXA10	0,141,-4669,-4665,-4665
chr8:75262270-75262552	chr8	+	75262282	75262424	True	NM_018972,NM_001040875,NM_020647	chr8,chr8,chr8	+,+,-	GDAP1,GDAP1,JPH1	193,228,-28720
chr19:57184152-57184986	chr19	+	57184240	57184912	True	NM_001193628,NM_001005850	chr19,chr19	+,-	LOC147670,ZNF835	-29773,6
chr16:55571157-55572783	chr16	+	55571596	55572831	True	NM_032330,NM_001025194,NM_017839	chr16,chr16,chr16	+,-,+	CAPNS2,CES1,LPCAT2	27752,294305,-28742
chr16:87904801-87905075	chr16	+	87904807	87905053	True	NM_001173539,NM_003486	chr16,chr16	+,-	BANP,SLC7A5	79984,-1707
chr12:12232022-12232993	chr12	+	12232039	12232795	True	NM_138722,NM_138723,NM_030766,NM_002336	chr12,chr12,chr12,chr12	+,+,+,-	BCL2L14,BCL2L14,BCL2L14,LRP6	-7688,-8212,-7688,187066
chr3:48698773-48698994	chr3	+	48698779	48698989	True	NM_033629,NM_001407	chr3,chr3	+,-	TREX1,CELSR3	-191601,1409
chr13:106141413-106142191	chr13	+	106141412	106142216	True	NM_004093,NM_001161812	chr13,chr13	-,+	EFNB2,DAOA	1045222,-22898
chr12:50135051-50135304	chr12	+	50135097	50135331	True	NM_001098576,NM_198900,NM_003217	chr12,chr12,chr12	+,-,+	TMBIM6,FMNL3,TMBIM6	260,-33900,-39
chr14:25043077-25043418	chr14	+	25043163	25043299	True	NM_015299,NM_001911	chr14,chr14	+,-	KHNYN,CTSG	-144073,2217
chr21:15882382-15882744	chr21	+	15882483	15882791	True	NR_003087,NM_022136	chr21,chr21	+,-	ABCC13,SAMSN1	-236415,35923
chr5:138627725-138628204	chr5	+	138627921	138628218	True	NM_005847,NM_018834,NM_001194956,NM_001194955	chr5,chr5,chr5,chr5	-,+,+,+	SLC23A1,MATR3,MATR3,MATR3	90872,1114,1220,1220
chr11:66740523-66742297	chr11	+	66741441	66742345	True	NM_001136485,NM_001040716	chr11,chr11	+,-	C11orf86,PC	408,-15594
chr5:140556886-140557251	chr5	+	140557197	140557291	True	NM_019120,NM_020957,NM_031947,NM_019119,NM_018940	chr5,chr5,chr5,chr5,chr5	+,+,-,+,+	PCDHB8,PCDHB16,SLC25A2,PCDHB9,PCDHB7	138,3688,126371,9601,-5006
chr9:39721634-39721842	chr9	+	39721642	39721860	True	NR_003528,NM_001085452	chr9,chr9	-,+	LOC653501,FAM75A1	-257116,163114
chr9:39721634-39721842	chr9	-	43801604	43801667	False	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	-170874,-116783
chr9:39721634-39721842	chr9	+	40518177	40518240	False	NM_001083124,NM_033160	chr9,chr9	+,-	FAM75A3,ZNF658	182050,273935
chr9:39721634-39721842	chr9	+	39192340	39192558	False	NM_033655,NM_001085452	chr9,chr9	-,+	CNTNAP3,FAM75A1	95796,163140
chrX:134466430-134467154	chrX	+	134466606	134467176	True	NM_007131,NM_152695	chrX,chrX	-,+	ZNF75D,ZNF449	-36641,11519
chr1:241801313-241801698	chr1	+	241801395	241801717	True	NM_014322,NM_144625,NM_001821	chr1,chr1,chr1	-,+,-	OPN3,WDR64,CHML	2034,13862,-2163
chr1:35370532-35370742	chr1	+	35370545	35370631	True	NM_001080418,NM_002060	chr1,chr1	-,+	DLGAP3,GJA4	403,-111997
chr17:57657493-57658072	chr17	+	57657693	57658055	True	NM_016077,NM_024612	chr17,chr17	-,+	PTRH2,DHX40	126851,-14865
chr17:57657493-57658072	chr17	-	58072177	58072539	False	NM_003161,NR_002924	chr17,chr17	+,-	RPS6KB1,DHX40P1	-101785,23854
chr12:54069668-54069912	chr12	+	54069671	54069957	True	NM_001002031,NM_005176,NM_134324	chr12,chr12,chr12	-,-,+	ATP5G2,ATP5G2,TARBP2	605,202,-174345
chr2:98706004-98707586	chr2	+	98706021	98707618	True	NM_015348,NM_144992	chr2,chr2	-,+	TMEM131,VWA3B	-93667,-2478
chr1:245135047-245135842	chr1	+	245135075	245135849	True	NR_026587,NR_026586,NR_026588,NM_001143943,NM_032328,NM_031844	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-	EFCAB2,EFCAB2,EFCAB2,EFCAB2,EFCAB2,HNRNPU	-1505,-1852,-1505,-1505,-1965,-107248
chr19:48325151-48325560	chr19	+	48325320	48325424	True	NM_000554,NM_198479	chr19,chr19	+,-	CRX,TPRX1	-272,-18459
chr7:99217992-99219934	chr7	+	99218063	99219913	True	NM_145115,NM_000777	chr7,chr7	+,-	ZNF498,CYP3A5	-3543,57758
chr22:20120086-20120971	chr22	+	20120286	20120950	True	NM_001185024,NM_013373,NM_182984	chr22,chr22,chr22	+,+,-	ZDHHC8,ZDHHC8,TRMT2A	-973,-973,-15518
chr22:17686297-17687269	chr22	+	17686369	17687081	True	NM_177405,NM_017424,NR_024483	chr22,chr22,chr22	-,-,+	CECR1,CECR1,CECR4	-5824,3750,-46141
chr11:125776575-125777223	chr11	+	125776764	125777194	True	NM_031307,NM_013264	chr11,chr11	-,+	PUS3,DDX25	-3648,-2557
chr7:138717292-138717760	chr7	+	138717492	138717683	True	NM_001144920,NM_080660	chr7,chr7	+,-	TTC26,ZC3HAV1L	100806,3151
chr18:51820068-51820417	chr18	+	51820080	51820458	True	NM_007195,NM_139171	chr18,chr18	+,-	POLI,STARD6	-24288,60537
chr16:857085-857423	chr16	+	857186	857306	True	NM_001013638,NM_016541	chr16,chr16	+,-	PRR25,GNG13	-1794,-6453
chr1:171655588-171656961	chr1	+	171655588	171656345	True	NM_001007239,NM_000261	chr1,chr1	+,-	METTL13,MYOC	94415,-33815
chr15:90895055-90895271	chr15	+	90895198	90895274	True	NR_028287,NM_001004309	chr15,chr15	-,+	GABARAPL3,ZNF774	-2519,202
chr16:14401941-14402635	chr16	+	14402063	14402355	True	NR_029854,NM_001134477,NR_030177	chr16,chr16,chr16	+,-,+	MIR365-1,PARN,MIR193B	786,321815,-4290
chrX:97875384-97876925	chrX	+	97875560	97876962	True	NR_024608,NM_013347	chrX,chrX	-,+	LOC442459,RPA4	1317929,-1736704
chr3:99543058-99544914	chr3	+	99543083	99544320	True	NM_014890,NM_032359	chr3,chr3	-,+	FILIP1L,C3orf26	50788,-6456
chr5:16936056-16936266	chr5	+	16936064	16936208	True	NM_012334,NM_006317	chr5,chr5	-,+	MYO10,BASP1	227,281541
chr1:46713401-46713646	chr1	+	46713400	46713592	True	NM_003579,NM_001142548,NR_024332	chr1,chr1,chr1	+,+,-	RAD54L,RAD54L,POMGNT1	-84,-84,-27423
chr10:134208623-134209345	chr10	+	134208645	134209341	True	NM_001098637,NM_138499,NM_173575	chr10,chr10,chr10	+,+,-	PWWP2B,PWWP2B,STK32C	1360,1360,-87168
chrX:82763839-82764439	chrX	+	82763867	82764416	True	NM_014496,NM_000307	chrX,chrX	-,+	RPS6KA6,POU3F4	678578,-649
chr19:1273774-1274233	chr19	+	1273920	1274146	True	NR_023313,NR_027271,NM_017914,NM_001280,NR_023312	chr19,chr19,chr19,chr19,chr19	+,-,+,+,+	CIRBP,C19orf23,C19orf24,CIRBP,CIRBP	-4704,-3661,1373,-4704,-4704
chr15:42297114-42297691	chr15	+	42297194	42297598	True	NM_001080490,NM_001114633	chr15,chr15	-,+	PLA2G4E,PLA2G4B	4897,-166234
chrX:15382741-15383413	chrX	+	15382743	15383136	True	NM_004469,NM_203281	chrX,chrX	-,+	FIGF,BMX	19456,135763
chr6:71119866-71120646	chr6	+	71119904	71120458	True	NM_020819,NM_001851,NM_001105531	chr6,chr6,chr6	+,-,+	FAM135A,COL9A1,FAM135A	2648,-107118,2648
chr7:100799897-100800379	chr7	+	100799917	100800427	True	NM_003378,NM_001283	chr7,chr7	-,+	VGF,AP1S1	8475,-2282
chr11:3647763-3647999	chr11	+	3647777	3648039	True	NM_053017,NR_002720	chr11,chr11	-,+	ART5,TRPC2	15496,-114
chr6:33387247-33387757	chr6	+	33387277	33387504	True	NM_002636,NM_001014838,NM_006772,NM_001014433,NM_001014837,NM_001014840,NM_024165,NR_027692,NM_015921	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	+,-,+,-,-,-,+,+,-	PHF1,CUTA,SYNGAP1,CUTA,CUTA,CUTA,PHF1,PHF1,CUTA	-8556,-1212,342,-1212,-1212,-1212,-8556,-8556,-1212
chr6:33387247-33387757	chr6_ssto_hap7	+	4867523	4867750	False	NM_002636,NM_001014838,NM_006772,NM_001014433,NM_001014837,NM_001014840,NM_024165,NR_027692	chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7	+,-,+,-,-,-,+,+	PHF1,CUTA,SYNGAP1,CUTA,CUTA,CUTA,PHF1,PHF1	-8554,-1212,342,-1212,-1212,-1212,-8554,-8554
chr10:70659081-70660498	chr10	+	70659141	70660495	True	NM_024045,NM_152707	chr10,chr10	+,-	DDX50,SLC25A16	538,-371861
chr4:152195094-152196397	chr4	+	152195438	152196245	True	NM_183375,NM_001128923	chr4,chr4	+,-	PRSS48,SH3D19	2079,-47778
chr20:47890389-47891379	chr20	+	47890474	47890815	True	NR_003605,NR_003604,NR_002433,NR_003606,NR_003695,NR_036658,NR_036659,NM_021035,NR_003030	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,+,+,+,+,+,+,-,+	NCRNA00275,NCRNA00275,SNORD12C,NCRNA00275,SNORD12B,NCRNA00275,NCRNA00275,ZNFX1,SNORD12	3899,3899,4666,3899,6034,3899,4363,3998,6404
chr2:234296189-234296734	chr2	+	234296208	234296563	True	NM_003648,NM_018218	chr2,chr2	+,-	DGKD,USP40	236,177724
chrX:111889473-111891388	chrX	+	111889595	111890439	True	NM_001004308,NM_178175	chrX,chrX	+,-	ZCCHC16,LHFPL1	-563398,32994
chr10:7827699-7828955	chr10	+	7828050	7828969	True	NM_005174,NM_012311,NM_001001973	chr10,chr10,chr10	+,-,+	ATP5C1,KIN,ATP5C1	1123,1025,1123
chr17:1587474-1587731	chr17	+	1587474	1587684	True	NM_001163673,NM_006445	chr17,chr17	+,-	WDR81,PRPF8	32132,542
chr20:58567482-58569377	chr20	+	58567740	58569194	True	NM_021810,NM_006242	chr20,chr20	+,-	CDH26,PPP1R3D	2222,-52388
chr11:1861900-1862156	chr11	+	1862042	1862136	True	NM_001145829,NR_036185,NM_138567,NM_003282,NM_001145841	chr11,chr11,chr11,chr11,chr11	+,-,+,+,+	TNNI2,MIR4298,SYT8,TNNI2,TNNI2	-1374,18680,-6419,-1860,-661
chr1:156266447-156267578	chr1	+	156267123	156267401	True	NM_144580,NM_032323,NM_001004319	chr1,chr1,chr1	-,+,-	C1orf85,TMEM79,VHLL	-1674,-13104,2085
chr9:103346220-103347460	chr9	+	103346240	103347476	True	NM_017746,NM_001018116	chr9,chr9	-,+	TEX10,MURC	-230981,-5955
chrX:8761407-8762902	chrX	+	8761678	8762943	True	NM_174951,NM_001001888,NM_001171186	chrX,chrX,chrX	-,+,-	FAM9A,VCX3B,FAM9A	6532,-328866,6486
chr13:96102289-96103429	chr13	+	96102568	96103417	True	NM_001105515,NM_182848	chr13,chr13	-,+	ABCC4,CLDN10	-148881,-16769
chr5:83677843-83678181	chr5	+	83677843	83678157	True	NM_005711,NM_004385	chr5,chr5	-,+	EDIL3,VCAN	2504,-910401
chrX:153714541-153714759	chrX	+	153714582	153714666	True	NM_001142392,NM_019848,NM_001142391,NM_014235,NM_017514,NM_006014	chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,+,-	SLC10A3,SLC10A3,SLC10A3,UBL4A,PLXNA3,LAGE3	4386,4386,4386,316,-28010,-6986
chr9:109929812-109931581	chr9	+	109929836	109931474	True	NM_002874,NR_031752	chr9,chr9	+,-	RAD23B,MIR548Q	114069,-81120
chr11:95032877-95034755	chr11	+	95032892	95034587	True	NM_144665,NM_015036	chr11,chr11	-,+	SESN3,ENDOD1	-68646,-209969
chr11:1786765-1787549	chr11	+	1786907	1787445	True	NM_138567,NM_001909,NM_001012416,NM_053005	chr11,chr11,chr11,chr11	+,-,+,-	SYT8,CTSD,KRTAP5-6,MOB2	68228,-1685,-68533,-1406
chr1:20617483-20618154	chr1	+	20617524	20618088	True	NM_001105572,NM_001039500	chr1,chr1	-,+	PLA2G2C,VWA5B1	-115837,-163
chr6:25723472-25723760	chr6	+	25723588	25723750	True	NM_170745,NM_170610	chr6,chr6	-,+	HIST1H2AA,HIST1H2BA	3100,3386
chr13:29295600-29295908	chr13	+	29295745	29295948	True	NM_181785,NM_001135919,NM_015932	chr13,chr13,chr13	-,-,+	SLC46A3,SLC46A3,POMP	-2595,-2595,-62663
chr22:19165211-19165439	chr22	+	19165303	19165387	True	NM_053006,NR_033687,NM_005984	chr22,chr22,chr22	+,-,-	TSSK2,SLC25A1,SLC25A1	-47033,697,964
chr16:3556554-3557482	chr16	+	3556809	3557281	True	NM_015041,NM_024793,NM_001080524	chr16,chr16,chr16	+,+,-	CLUAP1,CLUAP1,C16orf90	-5898,2612,-11388
chr15:45127076-45128139	chr15	+	45127446	45127820	True	NM_182985,NM_001145112	chr15,chr15	+,-	TRIM69,PATL2	-98937,-158360
chr2:6125512-6125743	chr2	+	6125519	6125769	True	NM_207315,NR_026833	chr2,chr2	-,+	CMPK2,LOC400940	880217,-3460
chr17:58203435-58203695	chr17	+	58203444	58203510	True	NM_000717,NR_027408	chr17,chr17	+,-	CA4,LOC653653	23791,-23164
chr17:58203435-58203695	chr17	-	58097757	58097823	False	NM_003161,NR_002924	chr17,chr17	+,-	RPS6KB1,DHX40P1	-127367,-1421
chr8:38582010-38582678	chr8	+	38582082	38582594	True	NM_001146216,NR_003129	chr8,chr8	+,-	TACC1,RNF5P1	3109,-123307
chr11:66114091-66114429	chr11	+	66114137	66114469	True	NM_015399,NM_006876,NM_001024957,NM_153266	chr11,chr11,chr11,chr11	-,-,-,+	BRMS1,B3GNT1,BRMS1,TMEM151A	-1555,742,-1555,-54815
chr3:61548445-61548661	chr3	+	61548641	61548709	True	NM_002841,NM_002012	chr3,chr3	+,-	PTPRG,FHIT	-1449,-311508
chr2:32292221-32293138	chr2	+	32292406	32293017	True	NM_199436,NM_032574,NM_014946	chr2,chr2,chr2	+,-,+	SPAST,DPY30,SPAST	-3777,-27562,-3777
chr1:231475980-231476466	chr1	+	231476293	231476441	True	NM_032018,NM_175876,NM_001010984	chr1,chr1,chr1	+,-,+	C1orf124,EXOC8,C1orf124	-2662,-2715,-2662
chr2:32852010-32852258	chr2	+	32852020	32852140	True	NM_017735,NM_021209,NM_001193509	chr2,chr2,chr2	+,-,+	TTC27,NLRC4,TTC27	946,-361208,946
chr1:144685704-144686186	chr1	+	144685720	144685850	True	NR_037182,NM_001037675	chr1,chr1	-,+	LOC653513,NBPF9	-5695,-70812
chr9:132390166-132390617	chr9	+	132390187	132390619	True	NM_199350,NM_014064	chr9,chr9	-,+	C9orf50,METTL11A	-7132,-1803
chr19:10736592-10737180	chr19	+	10736677	10736997	True	NM_020428,NR_024333	chr19,chr19	+,-	SLC44A2,LOC147727	-557,27601
chr1:65728750-65730349	chr1	+	65728760	65730319	True	NR_029516,NM_014787	chr1,chr1	-,+	MIR101-1,DNAJC6	-204569,110
chr6:112670483-112671179	chr6	+	112670493	112671156	True	NM_001105209,NM_001013734	chr6,chr6	-,+	LAMA4,RFPL4B	-94665,-2012
chr19:1864899-1865826	chr19	+	1865126	1865684	True	NM_079834,NM_031918	chr19,chr19	+,-	SCAMP4,KLF16	39688,-1562
chr6:154361400-154361932	chr6	+	154361449	154361949	True	NM_001130699,NM_001145283,NM_001145282,NM_001145285,NM_001145284,NM_001145286,NM_001008504,NM_001008505,NM_001008503,NM_000914	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,+,+,+,+,+,+,+,+,+	IPCEF1,OPRM1,OPRM1,OPRM1,OPRM1,OPRM1,OPRM1,OPRM1,OPRM1,OPRM1	289316,-1057,-1057,-1057,-954,-1057,-1057,-1057,-1057,-1057
chr2:54685622-54687035	chr2	+	54685933	54686960	True	NM_003128,NM_001003937	chr2,chr2	+,-	SPTBN1,TSPYL6	-2530,-202524
chr3:99372999-99373438	chr3	+	99373277	99373370	True	NM_020351,NM_014890	chr3,chr3	+,-	COL8A1,FILIP1L	-15881,221727
chr20:35967757-35968167	chr20	+	35967807	35968129	True	NM_198291,NM_021081,NM_005417	chr20,chr20,chr20	+,-,+	SRC,GHRH,SRC	6427,-82508,4958
chr6:86302654-86303112	chr6	+	86302798	86303102	True	NM_153816,NM_002526,NM_020468	chr6,chr6,chr6	-,+,-	SNX14,NT5E,SNX14	577,-143554,577
chr2:223731844-223732984	chr2	+	223732277	223733004	True	NM_005687,NM_203372,NM_004457	chr2,chr2,chr2	-,+,+	FARSB,ACSL3,ACSL3	-211450,-6609,-6609
chrX:151867384-151867686	chrX	+	151867480	151867614	True	NM_001129826,NM_005363,NM_175868	chrX,chrX,chrX	-,+,+	CSAG3,MAGEA6,MAGEA6	10106,-286,-286
chrX:151867384-151867686	chrX	-	151937855	151937989	False	NM_001129826,NM_005362	chrX,chrX	+,-	CSAG3,MAGEA3	-10095,301
chrX:41307192-41307586	chrX	+	41307244	41307493	True	NM_022567,NM_001126054	chrX,chrX	+,-	NYX,CASK	-582,474855
chr11:71827633-71829218	chr11	+	71827701	71828939	True	NM_014042,NM_000804	chr11,chr11	-,+	C11orf51,FOLR3	-3879,17831
chr1:26633308-26633630	chr1	+	26633406	26633656	True	NM_001803,NM_183008,NM_001077262	chr1,chr1,chr1	+,-,-	CD52,UBXN11,UBXN11	10754,-211,-211
chr14:52116290-52116635	chr14	+	52116290	52116449	True	NR_037676,NM_152330	chr14,chr14	-,+	C14orf82,FRMD6	2070,2126
chr12:57403052-57403483	chr12	+	57403069	57403155	True	NM_013251,NM_007264,NM_014830,NM_001178054,NR_033654	chr12,chr12,chr12,chr12,chr12	-,+,-,-,-	TAC3,GPR182,ZBTB39,TAC3,TAC3	7251,-14767,-2772,7251,7251
chr11:27526801-27527912	chr11	+	27527025	27527943	True	NR_033312,NR_033313,NR_033314,NR_033315,NR_002832,NM_018362	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,-	BDNF-AS1,BDNF-AS1,BDNF-AS1,BDNF-AS1,BDNF-AS1,LIN7C	455,455,455,455,455,433
chr22:51038280-51038548	chr22	+	51038302	51038590	True	NM_016431,NM_012324,NM_005198	chr22,chr22,chr22	+,+,-	MAPK8IP2,MAPK8IP2,CHKB	2971,540,-16874
chr5:149682874-149683497	chr5	+	149682989	149683527	True	NM_001008657,NM_001012301	chr5,chr5	+,-	TCOF1,ARSI	53674,-464
chr11:7043089-7043360	chr11	+	7043123	7043345	True	NM_013249,NM_176822	chr11,chr11	-,+	ZNF214,NLRP14	-1537,-1482
chr3:122336666-122337941	chr3	+	122336978	122337769	True	NM_031458,NM_152615	chr3,chr3	-,+	PARP9,PARP15	-53455,-2516
chr9:120177487-120178022	chr9	+	120177785	120177863	True	NM_138554,NM_014010	chr9,chr9	+,-	TLR4,ASTN2	288596,-468
chr13:20532121-20532343	chr13	+	20532157	20532339	True	NM_001039650,NM_197968,NM_001190964,NM_003453,NM_001190965	chr13,chr13,chr13,chr13,chr13	-,+,+,+,+	ZMYM5,ZMYM2,ZMYM2,ZMYM2,ZMYM2	-94381,470,508,470,634
chr8:134304579-134306040	chr8	+	134304583	134305913	True	NM_001135242,NR_037944,NM_006096	chr8,chr8,chr8	-,+,-	NDRG1,WISP1,NDRG1	3684,-101353,3684
chr19:50265286-50266378	chr19	+	50265402	50266361	True	NM_130787,NM_014203,NM_021733	chr19,chr19,chr19	+,+,-	AP2A1,AP2A1,TSKS	3818,3818,204
chr1:24119670-24120126	chr1	+	24119755	24120173	True	NM_001008216,NM_000403,NM_001127621,NM_007260	chr1,chr1,chr1,chr1	-,-,-,+	GALE,GALE,GALE,LYPLA2	7171,6911,5937,-2160
chr22:35625306-35625860	chr22	+	35625389	35625706	True	NM_001003681,NM_005368	chr22,chr22	+,-	HMGXB4,MB	27738,387729
chr14:23844204-23844791	chr14	+	23844484	23844732	True	NM_032459,NM_022789,NM_172314,NM_001037288,NM_138460,NM_005864	chr14,chr14,chr14,chr14,chr14,chr14	-,+,+,+,+,-	EFS,IL25,IL25,CMTM5,CMTM5,EFS	-9642,-2478,-2530,1284,1284,-9642
chr11:57364512-57365086	chr11	+	57364549	57365085	True	NM_001032295,NM_000062,NM_198183	chr11,chr11,chr11	+,+,-	SERPING1,SERPING1,UBE2L6	619,-13,-29096
chr20:3999429-4000951	chr20	+	3999445	4000996	True	NM_001134337,NR_029519,NM_001134338,NM_007219	chr20,chr20,chr20,chr20	-,+,-,-	RNF24,MIR103-2,RNF24,RNF24	-3229,-101355,-3229,-3391
chr7:41745224-41745430	chr7	+	41745285	41745445	True	NM_002192,NR_027119	chr7,chr7	-,+	INHBA,LOC285954	-2579,-11790
chr10:10833321-10834365	chr10	+	10833335	10834400	True	NR_027082,NM_001025077	chr10,chr10	-,+	SFTA1P,CELF2	2528,212858
chrX:119698012-119699459	chrX	+	119698506	119699046	True	NM_014060,NM_001079872	chrX,chrX	+,-	MCTS1,CUL4B	38697,-3689
chr3:141593169-141593770	chr3	+	141593387	141593579	True	NM_001679,NM_001178140	chr3,chr3	+,-	ATP1B3,TFDP2	1890,125704
chr17:7653703-7655409	chr17	+	7653769	7654942	True	NR_002778,NM_001126114	chr17,chr17	+,-	RPL29P2,TP53	2695,-62906
chrY:24452660-24453047	chrY	+	24452669	24453077	True	NR_001541,NR_002193,NM_152585	chrY,chrY,chrY	-,+,+	TTTY5,RBMY2FP,RBMY1F	-7646,1928,1932
chr11:111130471-111131105	chr11	+	111130470	111131144	True	NM_198498,NR_034154	chr11,chr11	+,-	C11orf53,C11orf92	-3816,39445
chr15:65824062-65824334	chr15	+	65824197	65824377	True	NM_197961,NM_016395	chr15,chr15	-,+	DPP8,PTPLAD1	-14162,-1427
chr11:76155113-76155837	chr11	+	76155450	76155872	True	NM_020193,NM_004705	chr11,chr11	+,-	C11orf30,PRKRIR	196,-63570
chr19:17569501-17570058	chr19	+	17569875	17570097	True	NM_198580,NM_138454	chr19,chr19	+,-	SLC27A1,NXNL1	11202,1678
chr3:102152149-102152462	chr3	+	102152152	102152346	True	NM_000986,NM_175056	chr3,chr3	-,+	RPL24,ZPLD1	-746589,1512
chr16:29828596-29829134	chr16	+	29828713	29828791	True	NM_006319,NM_024516,NM_017458,NM_145239,NM_005115	chr16,chr16,chr16,chr16,chr16	-,+,+,+,+	CDIPT,C16orf53,MVP,PRRT2,MVP	45845,-1236,2923,-5355,2923
chr3:57530649-57531715	chr3	+	57530770	57531746	True	NM_198564,NM_178504,NM_177966	chr3,chr3,chr3	-,-,+	DNAH12,DNAH12,PDE12	-699,-699,10234
chr16:11924053-11924434	chr16	+	11924145	11924321	True	NR_024050,NM_001192,NR_024049	chr16,chr16,chr16	-,+,-	BCAR4,TNFRSF17,BCAR4	-1456,134642,-1456
chr22:21368025-21368574	chr22	+	21368059	21368577	True	NM_001159554,NR_003608,NM_005446	chr22,chr22,chr22	+,-,+	P2RX6,MGC16703,P2RX6	864,49,886
chr7:132936143-132936416	chr7	+	132936143	132936222	True	NM_001037126,NM_021807,NM_017812	chr7,chr7,chr7	+,+,-	EXOC4,EXOC4,CHCHD3	1600,1600,-169315
chr19:51217920-51219089	chr19	+	51218138	51219010	True	NM_016148,NM_002975	chr19,chr19	-,+	SHANK1,CLEC11A	1235,7594
chr1:70661407-70663271	chr1	+	70661605	70662923	True	NM_017768,NM_004768,NM_001190987	chr1,chr1,chr1	-,+,+	LRRC40,SRSF11,SRSF11	8488,8441,8441
chrX:119005049-119005407	chrX	+	119005056	119005426	True	NM_006978,NM_004541	chrX,chrX	-,+	RNF113A,NDUFA1	415,307
chr17:60497522-60498524	chr17	+	60498060	60498149	True	NR_027486,NM_181725	chr17,chr17	-,+	TBC1D3P2,METTL2A	-145044,3096
chr13:45014022-45014428	chr13	+	45014021	45014427	True	NM_001010897,NM_006022	chr13,chr13	+,-	SERP2,TSC22D1	-66094,-3042
chr7:27156487-27157139	chr7	+	27156627	27157165	True	NM_030661,NM_153631,NR_002795	chr7,chr7,chr7	-,-,+	HOXA3,HOXA3,HOXA11-AS1	2099,9524,67861
chr9:46271143-46272005	chr9	+	46271281	46272033	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2640551,415532
chr9:46271143-46272005	chr9	+	67680195	67680245	False	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	113994,246515
chr9:46271143-46272005	chr9	-	47168529	47168579	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-3537799,-481014
chr9:46271143-46272005	chr9	+	44758965	44759015	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	231220,-1128235
chr9:46271143-46272005	chr9	-	45111308	45112036	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-121123,-1480578
chr2:216298544-216299543	chr2	+	216298996	216299514	True	NM_004044,NM_002026,NM_054034,NM_212476,NM_212474,NM_212482,NM_212478	chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-,-	ATIC,FN1,FN1,FN1,FN1,FN1,FN1	-122375,1327,1327,1327,1327,1327,1327
chr3:125567256-125568851	chr3	+	125567276	125568626	True	NR_024250,NR_031687	chr3,chr3	+,-	LOC100125556,MIR548I1	66817,-57881
chr6:16762087-16762410	chr6	+	16762139	16762439	True	NM_001128164,NM_001190766,NM_000332	chr6,chr6,chr6	-,+,-	ATXN1,FLJ23152,ATXN1	-418,340049,-418
chr22:30940740-30940946	chr22	+	30940784	30940887	True	NM_001193336,NM_000355	chr22,chr22	-,+	LOC730005,TCN2	1839,62182
chr22:30940740-30940946	chr20	+	1919007	1919072	False	NM_001190892,NM_001040023	chr20,chr20	-,+	PDYN,SIRPA	54437,-43242
chr12:122243225-122243438	chr12	+	122243294	122243354	True	NM_015048,NR_002809	chr12,chr12	+,-	SETD1B,LOC338799	-710,-1904
chr18:10526535-10526906	chr18	+	10526655	10526912	True	NM_003826,NM_022068	chr18,chr18	+,-	NAPG,FAM38B	-833,621900
chr18:44555997-44556298	chr18	+	44556018	44556268	True	NM_145653,NM_001100817,NM_016427,NM_031303	chr18,chr18,chr18,chr18	-,-,-,+	TCEB3C,TCEB3CL,TCEB3B,KATNAL2	231,-5,5770,-29282
chr18:44555997-44556298	chr18	+	44561440	44561592	False	NM_145653,NM_001100817,NM_016427,NM_031303	chr18,chr18,chr18,chr18	-,-,-,+	TCEB3C,TCEB3CL,TCEB3B,KATNAL2	-4991,-5227,446,-34704
chr18:44555997-44556298	chr18	+	44544176	44544426	False	NM_145653,NM_001100817,NM_031303	chr18,chr18,chr18	-,-,+	TCEB3C,TCEB3CL,KATNAL2	6158,-5,-17440
chr18:44555997-44556298	chr18	+	44550103	44550353	False	NM_145653,NM_001100817,NM_031303	chr18,chr18,chr18	-,-,+	TCEB3C,TCEB3CL,KATNAL2	231,-5,-23367
chr11:6291909-6292265	chr11	+	6291913	6292295	True	NM_176875,NM_032127	chr11,chr11	+,-	CCKBR,FAM160A2	-10998,-35972
chr6:15084577-15084968	chr6	+	15084885	15084995	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	161531,578344
chr16:27279221-27279914	chr16	+	27279343	27279809	True	NM_145080,NR_037184	chr16,chr16	-,+	NSMCE1,FLJ21408	354,-6
chr2:202193441-202194089	chr2	+	202193678	202193821	True	NM_001127391,NM_033356	chr2,chr2	-,+	ALS2CR12,CASP8	28335,-68512
chr7:106806499-106807258	chr7	+	106806655	106807012	True	NM_012257,NM_006348	chr7,chr7	+,-	HBP1,COG5	2447,398004
chr16:2184609-2185138	chr16	+	2184668	2185107	True	NM_001009944,NM_000296,NR_037467,NM_014353	chr16,chr16,chr16,chr16	-,-,-,+	PKD1,PKD1,MIR3180-5,RAB26	843,843,1074,13543
chr16:2184609-2185138	chr16	+	18494633	18494873	False	NR_036142,NR_003569,NR_036141,NR_036144	chr16,chr16,chr16,chr16	-,+,-,-	MIR3180-2,ABCC6P1,MIR3180-1,MIR3180-3	1301,87696,1305,1305
chr16:2184609-2185138	chr16	-	16404987	16405227	False	NR_036142,NR_036447,NR_036141,NM_001079528,NR_036144	chr16,chr16,chr16,chr16,chr16	+,+,+,-,+	MIR3180-2,PKD1P1,MIR3180-1,ABCC6,MIR3180-3	-1302,6238,-1306,-87659,-1306
chr16:2184609-2185138	chr16	+	15247399	15247639	False	NM_015027,NR_037466	chr16,chr16	+,-	PDXDC1,MIR3180-4	-178617,1270
chr16:2184609-2185138	chr16	-	15006331	15006571	False	NR_036142,NR_023387,NR_036141,NR_036144	chr16,chr16,chr16,chr16	+,-,+,+	MIR3180-2,ABCC6P2,MIR3180-1,MIR3180-3	-1301,-87772,-1305,-1305
chr11:2443966-2444212	chr11	+	2444080	2444226	True	NM_005706,NM_014555	chr11,chr11	+,-	TSSC4,TRPM5	-20608,99
chr3:178971101-178971516	chr3	+	178971100	178971240	True	NM_016331,NR_028135,NM_171829,NM_171830,NM_014407	chr3,chr3,chr3,chr3,chr3	+,-,-,-,-	ZNF639,KCNMB3,KCNMB3,KCNMB3,KCNMB3	70310,6497,6497,-1455,-1697
chr17:7252987-7253331	chr17	+	7252987	7253239	True	NM_032442,NM_198154,NM_001002914	chr17,chr17,chr17	-,+,+	NEURL4,TMEM95,KCTD11	-20349,5257,1968
chr14:104606567-104607188	chr14	+	104606572	104607150	True	NM_004894,NM_015656	chr14,chr14	-,+	C14orf2,KIF26A	-218669,-1563
chrX:69666622-69666942	chrX	+	69666785	69666957	True	NM_020730,NM_016484,NM_021120,NM_001166278	chrX,chrX,chrX,chrX	+,-,+,+	DLG3,PDZD11,DLG3,DLG3	5197,-156987,-2131,7988
chr14:75537683-75538553	chr14	+	75537688	75538329	True	NM_001042430,NM_203488,NM_001107,NM_024643	chr14,chr14,chr14,chr14	+,-,-,+	FAM164C,ACYP1,ACYP1,FAM164C	-1440,-6952,-6952,-1440
chr10:48389372-48389611	chr10	+	48389428	48389638	True	NM_002900,NM_153034	chr10,chr10	-,+	RBP3,ZNF488	1403,-34390
chr1:40974932-40975317	chr1	+	40974945	40975355	True	NM_022774,NM_014747	chr1,chr1	+,-	DEM1,RIMS3	-563,156019
chr5:1547042-1547447	chr5	+	1547042	1547488	True	NM_024830,NM_004553	chr5,chr5	-,+	LPCAT1,NDUFS6	-22966,254007
chr4:185137355-185138244	chr4	+	185137645	185138167	True	NM_020225,NM_153343	chr4,chr4	+,-	STOX2,ENPP6	-311199,1001
chr7:23339873-23340385	chr7	+	23339982	23340298	True	NM_138446,NM_006547	chr7,chr7	+,-	C7orf30,IGF2BP3	-1093,169747
chr7:142644997-142645553	chr7	+	142645002	142645589	True	NM_019841,NM_178829,NM_000420	chr7,chr7,chr7	-,+,-	TRPV5,C7orf34,KEL	-14182,-8450,13971
chr21:46014625-46015471	chr21	+	46015031	46015439	True	NM_198689,NM_198688	chr21,chr21	+,-	KRTAP10-7,KRTAP10-6	5057,-2645
chrX:38664611-38664944	chrX	+	38664641	38664821	True	NM_001034853,NM_001098790,NM_001098791,NM_021242	chrX,chrX,chrX,chrX	-,+,+,+	RPGR,MID1IP1,MID1IP1,MID1IP1	-477853,-4007,-4007,-1619
chr11:63276602-63277287	chr11	+	63276668	63277334	True	NM_001142536,NM_001142537,NM_001142535,NM_033101,NM_001142538,NM_054108	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,-	LGALS12,LGALS12,LGALS12,LGALS12,LGALS12,HRASLS5	-3195,-1260,-3195,-3195,-1260,-17988
chr16:29272871-29273198	chr16	+	29272877	29273245	True	NR_002939,NM_001031827	chr16,chr16	+,-	RUNDC2C,BOLA2	29295,193090
chr16:29272871-29273198	chr16	+	88268329	88268487	False	NM_001127464,NM_001739	chr16,chr16	+,-	ZNF469,CA5A	225391,-298217
chr11:73309379-73309659	chr11	+	73309378	73309698	True	NM_001130033,NM_015159	chr11,chr11	+,-	PLEKHB1,FAM168A	47524,-150
chr17:40330838-40332090	chr17	+	40330956	40331848	True	NM_001524,NM_033194,NM_012285	chr17,chr17,chr17	-,+,-	HCRT,HSPB9,KCNH4	5672,-56251,1498
chr2:231277738-231279611	chr2	+	231277744	231279636	True	NM_001185015,NM_001080391,NM_003113	chr2,chr2,chr2	-,+,+	SP110,SP100,SP100	-187300,1234,1234
chr16:29302479-29302813	chr16	+	29302509	29302861	True	NR_002939,NM_001031827	chr16,chr16	+,-	RUNDC2C,BOLA2	-19,163474
chr16:81129973-81130178	chr16	+	81130014	81130224	True	NM_004483,NR_033249,NR_033247,NM_015251	chr16,chr16,chr16,chr16	-,-,-,+	GCSH,GCSH,LOC100329108,ATMIN	-34,-34,-60,-60607
chr5:154227692-154228381	chr5	+	154227855	154228230	True	NM_004779,NM_032385	chr5,chr5	+,-	CNOT8,C5orf4	9967,2050
chr10:1204616-1205473	chr10	+	1204700	1205437	True	NR_015376,NM_004508	chr10,chr10	+,-	NCRNA00200,IDI1	270,-109639
chr17:30226345-30226884	chr17	+	30226683	30226896	True	NM_015355,NM_018428	chr17,chr17	+,-	SUZ12,UTP6	37147,1889
chr7:155089893-155090122	chr7	+	155089960	155090026	True	NM_001103176,NM_005542,NM_198337,NM_198336	chr7,chr7,chr7,chr7	-,+,+,+	CNPY1,INSIG1,INSIG1,INSIG1	236563,-525,-525,-525
chrX:28604121-28605644	chrX	+	28604203	28605446	True	NM_014271,NM_001017930	chrX,chrX	+,-	IL1RAPL1,DCAF8L1	234,-604637
chr22:38578068-38578512	chr22	+	38578100	38578286	True	NM_003560,NM_001004426,NM_001161572,NM_001199562	chr22,chr22,chr22,chr22	-,-,+,-	PLA2G6,PLA2G6,MAFF,PLA2G6	-339,-339,19652,-264
chr20:43151601-43152627	chr20	+	43151600	43152646	True	NM_198941,NM_007066,NM_006811,NM_181805,NM_181804	chr20,chr20,chr20,chr20,chr20	-,+,-,+,+	SERINC3,PKIG,SERINC3,PKIG,PKIG	-874,7789,-874,7789,7789
chr7:100472107-100472427	chr7	+	100472117	100472299	True	NM_001015072,NM_003302,NM_001128853,NM_001128852,NM_015908,NM_001128854	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,+,+	UFSP1,TRIP6,SRRT,SRRT,SRRT,SRRT	15090,-7219,401,401,401,401
chr22:17602295-17602501	chr22	+	17602346	17602466	True	NM_031890,NM_001163079,NM_014339	chr22,chr22,chr22	-,-,+	CECR6,CECR6,IL17RA	-133,-89,-36546
chr19:58124451-58125536	chr19	+	58124676	58125524	True	NM_003435,NM_017879	chr19,chr19	+,-	ZNF134,ZNF416	305,-34433
chr3:157155747-157156207	chr3	+	157155932	157156194	True	NM_002852,NM_001167917	chr3,chr3	+,-	PTX3,VEPH1	-1403,57151
chr17:73634957-73635225	chr17	+	73635093	73635273	True	NR_028439,NM_001162997,NM_001162995,NM_004259	chr17,chr17,chr17,chr17	+,+,+,-	LOC643008,LOC100130933,LOC643008,RECQL5	-2469,7372,-5630,28042
chrX:63614617-63615017	chrX	+	63614791	63615061	True	NM_001010888,NM_017677	chrX,chrX	+,-	ZC3H12B,MTMR8	1093553,322
chr13:51698422-51700232	chr13	+	51698584	51700168	True	NR_003923,NM_145019	chr13,chr13	-,+	GUCY1B2,FAM124A	-58291,96338
chrX:153604352-153605978	chrX	+	153604641	153605919	True	NM_001110556,NM_000117,NM_001456	chrX,chrX,chrX	-,+,-	FLNA,EMD,FLNA	-1635,1677,-1635
chr3:196693708-196693991	chr3	+	196693710	196693946	True	NR_024388,NM_025163	chr3,chr3	+,-	LOC152217,PIGZ	-24267,1808
chr11:844820-845075	chr11	+	844819	845093	True	NM_003271,NM_021128,NM_001025239,NM_001025238,NM_001025235,NM_001025234,NM_001025237,NM_001025236	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,-,+,+,+,+,+,+	TSPAN4,POLR2L,TSPAN4,TSPAN4,TSPAN4,TSPAN4,TSPAN4,TSPAN4	-2046,-2290,-2046,-2046,-1929,-789,-424,-1929
chr16:89558977-89559673	chr16	+	89559067	89559232	True	NM_199367,NM_013275	chr16,chr16	+,-	SPG7,ANKRD11	15572,-2098
chr6:43334881-43335617	chr6	+	43334926	43335581	True	NM_014345,NM_001198934	chr6,chr6	-,+	ZNF318,ABCC10	1661,59710
chr6:132144354-132145891	chr6	+	132144442	132145435	True	NM_006208,NM_001145659	chr6,chr6	+,-	ENPP1,CTAGE9	-15337,-112285
chr17:7138544-7138980	chr17	+	7138609	7138949	True	NM_001033859,NM_024297,NM_007278,NM_004422	chr17,chr17,chr17,chr17	+,-,-,-	ACADVL,PHF23,GABARAP,DVL2	-15514,3926,6854,-746
chr7:116503060-116503435	chr7	+	116503162	116503355	True	NR_002330,NM_006136	chr7,chr7	-,+	ST7OT1,CAPZA2	91083,-650
chr19:57787286-57788627	chr19	+	57787659	57788478	True	NM_001012729,NM_006635	chr19,chr19	-,+	DUXA,ZNF460	-108803,3374
chr1:16957140-16957456	chr1	+	16957376	16957452	True	NR_026752,NR_027504	chr1,chr1	-,+	CROCCP2,MST1P2	1,14616
chr16:727796-728052	chr16	+	727899	728037	True	NM_001005920,NM_003961,NM_138769,NM_005861	chr16,chr16,chr16,chr16	-,+,+,+	JMJD8,RHBDL1,RHOT2,STUB1	6452,-1875,-9817,2077
chr11:8929284-8930462	chr11	+	8929529	8930473	True	NM_020642,NM_005418,NM_182901	chr11,chr11,chr11	+,-,+	C11orf17,ST5,C11orf17	2227,2075,2328
chr11:67796540-67797286	chr11	+	67796543	67797235	True	NM_030930,NM_006019,NM_002496	chr11,chr11,chr11	-,+,+	UNC93B1,TCIRG1,NDUFS8	-24950,9226,848
chr12:32111474-32112192	chr12	+	32111553	32112180	True	NM_018169,NM_001013699	chr12,chr12	+,-	C12orf35,H3F3C	172,-166378
chr2:234624886-234625853	chr2	+	234624951	234625806	True	NM_001001394,NM_019078,NM_007120	chr2,chr2,chr2	-,+,+	DNAJB3,UGT1A5,UGT1A4	26905,-3371,1631
chr18:54304892-54305358	chr18	+	54305026	54305358	True	NM_015285,NM_004786,NR_024546	chr18,chr18,chr18	+,-,-	WDR7,TXNL1,TXNL1	13257,612,612
chr6:33265320-33265745	chr6_qbl_hap6	+	4497609	4497965	False	NM_001164267,NR_028387,NM_004761,NM_005452,NM_001185181,NM_014260	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	-,-,-,-,+,+	WDR46,RGL2,RGL2,WDR46,PFDN6,PFDN6	-8062,1501,1501,-8062,-8005,-8039
chr6:33265320-33265745	chr6_mcf_hap5	+	4739113	4739469	False	NR_028387,NM_014260,NM_001164267,NM_005452,NM_004761	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	-,+,-,-,-	RGL2,PFDN6,WDR46,WDR46,RGL2	1501,-8042,-8065,-8065,1501
chr6:33265320-33265745	chr6_cox_hap2	+	4709183	4709539	False	NR_028387,NM_014260,NM_001164267,NM_005452,NM_004761	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	-,+,-,-,-	RGL2,PFDN6,WDR46,WDR46,RGL2	1501,-8042,-8065,-8065,1501
chr6:33265320-33265745	chr6	+	33265369	33265725	True	NM_001164267,NR_028387,NM_004761,NM_005452,NM_001185181,NM_014260	chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,-,+,+	WDR46,RGL2,RGL2,WDR46,PFDN6,PFDN6	-8065,1501,1501,-8065,-8008,-8042
chr6:33265320-33265745	chr6_dbb_hap3	+	4546695	4547051	False	NR_028387,NM_014260,NM_001164267,NM_005452,NM_004761	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	-,+,-,-,-	RGL2,PFDN6,WDR46,WDR46,RGL2	1501,-8042,-8065,-8065,1501
chr17:41424508-41425128	chr17	+	41424522	41425172	True	NR_027412,NM_001661	chr17,chr17	-,+	LOC100130581,ARL4D	41144,51180
chr12:77455532-77457426	chr12	+	77455665	77456971	True	NM_203394,NM_015336	chr12,chr12	-,+	E2F7,ZDHHC17	2439,-297862
chr1:185129756-185130195	chr1	+	185129945	185130203	True	NM_017673,NM_030934,NM_001105518,NM_001202423	chr1,chr1,chr1,chr1	+,-,+,-	SWT1,TRMT1L,SWT1,TRMT1L	-3711,-3829,-3810,-3715
chr1:153652151-153652363	chr1	+	153652188	153652268	True	NM_004515,NM_000906	chr1,chr1	-,+	ILF2,NPR1	-8709,-1075
chr3:23988831-23989328	chr3	+	23988965	23989333	True	NM_001145425,NM_005126,NM_020345	chr3,chr3,chr3	+,+,-	NR1D2,NR1D2,NKIRAS1	-1404,-2265,-30428
chr7:98468584-98468795	chr7	+	98468620	98468830	True	NM_001134450,NM_001134451,NM_152913,NM_003496	chr7,chr7,chr7,chr7	-,-,-,+	TMEM130,TMEM130,TMEM130,TRRAP	-947,-947,-947,7282
chr13:24883201-24884123	chr13	+	24883221	24883886	True	NM_178540,NM_006437	chr13,chr13	+,-	C1QTNF9,PARP4	-22,203121
chr4:47456804-47458118	chr4	+	47456904	47457956	True	NM_020453,NM_017845	chr4,chr4	+,-	ATP10D,COMMD8	29453,7777
chr16:89040804-89041375	chr16	+	89040966	89041352	True	NM_005187,NM_016209	chr16,chr16	-,+	CBFA2T3,TRAPPC2L	2202,-117511
chr6:26273513-26273745	chr6	+	26273560	26273746	True	NM_003525,NM_003534	chr6,chr6	+,-	HIST1H2BI,HIST1H3G	-407,-1948
chr14:55554846-55556036	chr14	+	55555084	55555506	True	NM_007086,NM_144578	chr14,chr14	-,+	WDHD1,MAPK1IP1L	-61265,-36779
chr9:137769605-137770543	chr9	+	137769733	137770348	True	NR_037460,NM_015837,NM_004108	chr9,chr9,chr9	-,+,+	MIR3689A,FCN2,FCN2	-27243,2309,2309
chr18:12705356-12707045	chr18	+	12705444	12706944	True	NM_020232,NM_024899	chr18,chr18	+,-	PSMG2,CEP76	-2508,-2741
chr7:136567054-136568015	chr7	+	136567061	136568057	True	NM_001006628,NM_002825	chr7,chr7	+,-	CHRM2,PTN	-13121,460539
chr4:185397661-185397959	chr4	+	185397761	185397923	True	NM_002199,NM_152683	chr4,chr4	-,+	IRF2,CCDC111	-2035,172843
chr1:145611482-145612104	chr1	+	145611547	145612041	True	NM_014455,NM_006468	chr1,chr1	+,-	RNF115,POLR3C	-562,-663
chr1:145611482-145612104	chr1	-	147550634	147551067	False	NM_001101663,NM_001097616	chr1,chr1	-,+	NBPF24,GPR89C	59064,-125118
chr1:145611482-145612104	chr1	-	146008795	146009204	False	NM_001101663,NM_001097616	chr1,chr1	-,+	NBPF24,GPR89C	59095,-124978
chr9:69257589-69258824	chr9	+	69257810	69258606	True	NM_001085457,NM_001098805	chr9,chr9	-,+	CBWD6,ANKRD20A4	4045,123374
chr9:69257589-69258824	chr9	-	70860828	70861622	False	NR_015423,NM_201453	chr9,chr9	-,+	LOC572558,CBWD3	111190,-4048
chr9:69257589-69258824	chr9	+	70485383	70486177	False	NM_001024916,NM_201453	chr9,chr9	-,-	CBWD5,CBWD3	4052,4058
chr3:109029942-109030306	chr3	+	109029941	109030261	True	NM_138815,NM_001145553	chr3,chr3	-,+	DPPA2,FLJ25363	5165,98575
chr13:22175232-22175964	chr13	+	22175242	22175926	True	NM_152726,NM_002010	chr13,chr13	-,+	EFHA1,FGF9	2479,69288
chr19:55247672-55248137	chr19	+	55247941	55248118	True	NM_001127255,NM_015868	chr19,chr19	-,+	NLRP7,KIR2DL3	210805,1855
chr1:155291451-155291776	chr1	+	155291468	155291824	True	NM_001105205,NM_001105204,NM_014328,NM_001039517,NM_001105203	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	RUSC1,RUSC1,RUSC1,C1orf104,RUSC1	1903,-879,2393,2164,-879
chr16:89044168-89044470	chr16	+	89044224	89044484	True	NR_023316,NM_005187	chr16,chr16	+,-	ACSF3,CBFA2T3	115769,-720
chr17:57285642-57286364	chr17	+	57286022	57286174	True	NM_182620,NM_018149	chr17,chr17	-,+	SKA2,C17orf71	-53222,1196
chr16:28937186-28938717	chr16	+	28937286	28938518	True	NM_024816,NM_001770,NM_001178098	chr16,chr16,chr16	-,+,+	RABEP2,CD19,CD19	-754,4741,4741
chr12:103302793-103304214	chr12	+	103302919	103304116	True	NM_000277,NM_004316	chr12,chr12	-,+	PAH,ASCL1	7315,47335
chr9:28712182-28713022	chr9	+	28712239	28712689	True	NM_152570,NM_020124	chr9,chr9	-,+	LINGO2,IFNK	6679,-1187981
chr19:54959355-54959677	chr19	+	54959358	54959698	True	NM_198988,NM_052925	chr19,chr19	-,+	LENG9,LENG8	15246,366
chr1:27645579-27645960	chr1	+	27645909	27646007	True	NR_037576,NM_004672,NR_037577,NM_032125,NR_033926,NR_037580	chr1,chr1,chr1,chr1,chr1,chr1	+,-,+,+,+,+	TMEM222,MAP3K6,TMEM222,TMEM222,LOC644961,TMEM222	2628,47380,2628,2628,4357,2628
chr6:66419014-66420752	chr6	+	66419360	66420757	True	NR_026540,NM_001142800,NM_001142801	chr6,chr6,chr6	+,-,-	MCART3P,EYS,EYS	77014,-2242,-2242
chr1:42629352-42629741	chr1	+	42629368	42629768	True	NM_007102,NM_033553	chr1,chr1	+,-	GUCA2B,GUCA2A	-10327,677
chr12:119419667-119419883	chr12	+	119419673	119419839	True	NR_024246,NM_194286	chr12,chr12	-,+	LOC144742,SRRM4	321396,-424
chrX:52111928-52112671	chrX	+	52111942	52112710	True	NR_033251,NM_130777,NM_001079538	chrX,chrX,chrX	-,+,+	XAGE1C,XAGE2,XAGE2B	147494,13,447
chrX:52111928-52112671	chrX	-	52386463	52387231	False	NM_130777,NM_001097592,NM_001079538	chrX,chrX,chrX	-,+,-	XAGE2,XAGE1A,XAGE2B	-13,124529,-447
chr9:33474016-33474747	chr9	+	33474061	33474365	True	NM_022917,NR_003573,NM_139235	chr9,chr9,chr9	-,+,-	NOL6,ANXA2P2,NOL6	-120,149857,-120
chr1:16063203-16063469	chr1	+	16063203	16063393	True	NM_001089591,NM_001013641,NM_207348	chr1,chr1,chr1	-,+,+	UQCRHL,TMEM82,SLC25A34	70851,5523,-445
chr17:38296509-38296715	chr17	+	38296675	38296737	True	NM_021724,NM_007359	chr17,chr17	-,+	NR1D1,CASC3	-39702,-219
chr3:101300877-101301218	chr3	+	101300877	101301028	True	NM_020654,NM_020357	chr3,chr3	-,+	SENP7,PCNP	-68792,-7891
chr6:152476236-152477088	chr6	+	152476273	152477123	True	NM_000125,NM_133650	chr6,chr6	+,-	ESR1,SYNE1	-347510,23528
chr2:65356391-65356798	chr2	+	65356391	65356727	True	NM_004161,NM_015147,NM_015543	chr2,chr2,chr2	-,+,-	RAB1A,CEP68,RAB1A	758,-72952,758
chr19:38915747-38916237	chr19	+	38915855	38916101	True	NM_170604,NM_001146204,NM_001146205,NM_001146206,NM_001146207,NM_001146202,NM_001146203,NM_000540,NM_001042723	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,+,+	RASGRP4,RASGRP4,RASGRP4,RASGRP4,RASGRP4,RASGRP4,RASGRP4,RYR1,RYR1	894,894,894,894,894,894,894,8238,8238
chr17:4805500-4805984	chr17	+	4805525	4806033	True	NM_000080,NM_001145536	chr17,chr17	-,+	CHRNE,C17orf107	386,-2628
chr21:46358412-46358975	chr21	+	46358502	46358741	True	NM_058190,NR_027128,NR_027129,NM_001127491	chr21,chr21,chr21,chr21	+,-,-,-	C21orf70,C21orf67,C21orf67,ITGB2	1213,1138,1138,-9749
chr19:17972420-17972961	chr19	+	17972425	17972913	True	NM_000453,NM_000980,NM_000215,NR_001593,NR_000012	chr19,chr19,chr19,chr19,chr19	+,+,-,+,+	SLC5A5,RPL18A,JAK3,RPL18AP3,SNORA68	9868,-1745,-13584,-1749,483
chr7:70604698-70606118	chr7	+	70605037	70605711	True	NM_022479,NR_037477	chr7,chr7	+,-	WBSCR17,MIR3914-1	-7301,167095
chr2:73618195-73618580	chr2	+	73618197	73618357	True	NM_001965,NM_015120	chr2,chr2	-,+	EGR4,ALMS1	-97368,-5362
chr10:97320486-97321019	chr10	+	97320617	97320987	True	NM_024991,NM_015385,NM_001098175	chr10,chr10,chr10	-,-,+	SORBS1,SORBS1,ENTPD1	234,234,150548
chr2:43877875-43878499	chr2	+	43878072	43878547	True	NM_001101330,NM_172069	chr2,chr2	-,+	LOC728819,PLEKHH2	24965,-13688
chr2:71560731-71561773	chr2	+	71560786	71561617	True	NM_020459,NM_001014972,NM_014497	chr2,chr2,chr2	-,+,+	PAIP2B,ZNF638,ZNF638	-106553,-1948,-1948
chr5:78402174-78403500	chr5	+	78402219	78403241	True	NM_013391,NM_001713	chr5,chr5	-,+	DMGDH,BHMT	-36770,4362
chr7:73442050-73442320	chr7	+	73442165	73442361	True	NM_001081754,NM_000501,NM_001081752,NM_001081753,NM_152559,NM_001081755	chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,-,+	ELN,ELN,ELN,ELN,WBSCR27,ELN	65,65,65,65,-185310,65
chr22:36928171-36928775	chr22	+	36928401	36928506	True	NM_003753,NM_145343	chr22,chr22	-,+	EIF3D,APOL1	-3124,-279335
chr12:44153253-44153562	chr12	+	44153263	44153381	True	NM_016123,NM_001114182,NM_001145256,NM_001145258,NM_001098615,NM_001098614,NM_031292,NM_001145257	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,+,+,-,-,-,+	IRAK4,IRAK4,IRAK4,IRAK4,PUS7L,PUS7L,PUS7L,IRAK4	-567,-567,-567,-567,-702,-701,-667,-567
chr3:125691430-125692976	chr3	+	125691513	125692972	True	NM_001012337,NM_001195223	chr3,chr3	+,-	ROPN1B,ALG1L	-3542,-35626
chr3:125691430-125692976	chr3	-	123697701	123698454	False	NR_028136,NM_017578	chr3,chr3	+,-	KALRN,ROPN1	115103,11795
chr7:55088981-55089732	chr7	+	55088988	55089708	True	NM_201284,NM_005228,NM_014302,NM_201282,NM_201283	chr7,chr7,chr7,chr7,chr7	+,+,-,+,+	EGFR,EGFR,SEC61G,EGFR,EGFR	-2314,-2314,-262049,-2314,-2314
chr2:113815139-113816842	chr2	+	113815364	113816699	True	NM_173161,NM_173178,NM_012275,NM_173170,NM_014438	chr2,chr2,chr2,chr2,chr2	+,-,+,+,-	IL1F10,IL1F8,IL1F5,IL1F5,IL1F8	8847,-4924,-15,-19,-4924
chr5:63257093-63257481	chr5	+	63257179	63257513	True	NM_000524,NM_178532	chr5,chr5	-,+	HTR1A,RNF180	83,204157
chr21:30958325-30959804	chr21	+	30958596	30959819	True	NM_175611,NR_033368	chr21,chr21	-,+	GRIK1,NCRNA00258	352513,8540
chr8:1994591-1995388	chr8	+	1994615	1995290	True	NR_033895,NM_003970	chr8,chr8	-,+	LOC286083,MYOM2	-743788,-1508
chr1:111889467-111889708	chr1	+	111889510	111889581	True	NR_029429,NM_181643	chr1,chr1	-,+	PGCP1,C1orf88	42943,-367
chr14:93390475-93391704	chr14	+	93390529	93391705	True	NM_005606,NM_001275	chr14,chr14	-,+	LGMN,CHGA	-175482,-1135
chr7:4639175-4640457	chr7	+	4640243	4640341	True	NM_020144,NM_001037165	chr7,chr7	-,+	PAPOLB,FOXK1	261334,81588
chr7:5919678-5920804	chr7	+	5919680	5920654	True	NM_001097622,NM_001099697	chr7,chr7	+,-	OCM,RSPH10B2	-160,89710
chr10:81964316-81964729	chr10	+	81964366	81964672	True	NM_145869,NM_145868,NM_001012973,NM_001157	chr10,chr10,chr10,chr10	-,-,+,-	ANXA11,ANXA11,PLAC9,ANXA11	706,706,-72159,706
chr14:42075404-42075659	chr14	+	42075408	42075704	True	NM_152447,NM_203301	chr14,chr14	+,-	LRFN5,FBXO33	1059,-2173704
chr9:69649444-69650746	chr9	+	69649618	69650778	True	NM_001085457,NR_024443	chr9,chr9	-,+	CBWD6,LOC100133920	-387025,582
chr9:69649444-69650746	chr9	-	67031918	67032716	False	NR_024443,NR_024496	chr9,chr9	-,+	LOC100133920,LOC442421	-936,-537700
chr9:69649444-69650746	chr9	+	67287677	67288827	False	NM_032250,NR_002817	chr9,chr9	+,-	ANKRD20A1,AQP7P1	637933,715
chr9:69649444-69650746	chr9	+	33401782	33401833	False	NM_001170,NM_002504	chr9,chr9	-,+	AQP7,NFX1	735,-111416
chr9:69649444-69650746	chr9	-	42858575	42859729	False	NR_026759,NR_026558	chr9,chr9	-,+	FAM95B1,AQP7P3	173633,-474
chr10:23982566-23982804	chr10	+	23982676	23982806	True	NM_153714,NM_001098500	chr10,chr10	-,+	C10orf67,KIAA1217	-348904,868
chr1:21619148-21619538	chr1	+	21619208	21619504	True	NM_032264,NM_001113349,NM_001397	chr1,chr1,chr1	+,-,-	NBPF3,ECE1,ECE1	147126,-2442,-2226
chr3:49961369-49962034	chr3	+	49961598	49961827	True	NM_001167582,NM_032355,NM_001142501	chr3,chr3,chr3	+,-,-	RBM6,MON1A,MON1A	15649,5669,5669
chr5:159342176-159343155	chr5	+	159342461	159343159	True	NM_000679,NM_052927	chr5,chr5	+,-	ADRA1B,PWWP2A	580,203343
chr16:88869610-88869854	chr16	+	88869764	88869824	True	NM_000485,NM_001030018,NM_030928	chr16,chr16,chr16	-,-,+	APRT,APRT,CDT1	8568,8568,361
chr16:75285849-75286591	chr16	+	75285866	75286636	True	NM_001170719,NM_001906,NM_001170717,NM_014567	chr16,chr16,chr16,chr16	-,+,-,-	BCAR1,CTRB1,BCAR1,BCAR1	-3642,-33033,-340,-340
chr2:109605063-109605632	chr2	+	109605094	109605660	True	NM_022336,NM_001099289	chr2,chr2	-,+	EDAR,SH3RF3	218,140336
chr14:54904819-54906426	chr14	+	54905026	54906253	True	NM_005776,NM_005192	chr14,chr14	-,+	CNIH,CDKN3	1953,-41404
chr2:86424162-86424817	chr2	+	86424194	86424462	True	NM_006839,NM_016622,NM_001100170,NM_145644,NM_001100169	chr2,chr2,chr2,chr2,chr2	-,+,-,+,-	IMMT,MRPL35,IMMT,MRPL35,IMMT	-1301,2093,-1301,2093,-1301
chr9:132389252-132389475	chr9	+	132389255	132389511	True	NM_199350,NM_014064	chr9,chr9	-,+	C9orf50,METTL11A	-6200,-871
chr1:160082394-160083328	chr1	+	160082499	160083079	True	NM_052868,NM_000702	chr1,chr1	-,+	IGSF8,ATP1A2	-14091,2440
chr6:112409801-112410254	chr6	+	112409918	112410284	True	NM_016262,NM_001033564	chr6,chr6	-,+	TUBE1,C6orf225	-1167,-1296
chr6:155543381-155544946	chr6	+	155543785	155544749	True	NM_016020,NM_001010927	chr6,chr6	-,+	TFB1M,TIAM2	90918,-5739
chr8:71637036-71637408	chr8	+	71637120	71637332	True	NM_016027,NM_001011720	chr8,chr8	-,+	LACTB2,XKR9	-55673,-55581
chr1:20440861-20441214	chr1	+	20440895	20441243	True	NM_022819,NM_012400	chr1,chr1	+,-	PLA2G2F,PLA2G2D	24579,4815
chr4:119600046-119601761	chr4	+	119600176	119601715	True	NM_014822,NM_020961	chr4,chr4	-,+	SEC24D,METTL14	155668,4858
chr4:159092172-159092422	chr4	+	159092172	159092460	True	NM_001128424,NM_016613,NM_001031700,NM_018342	chr4,chr4,chr4,chr4	-,-,-,+	FAM198B,FAM198B,FAM198B,TMEM144	1792,1308,1792,38940
chr1:113050160-113050933	chr1	+	113050178	113050960	True	NR_036210,NM_024494	chr1,chr1	-,+	MIR4256,WNT2B	-45723,409
chr16:88637997-88639784	chr16	+	88638148	88639767	True	NM_000101,NM_144604	chr16,chr16	-,+	CYBA,ZC3H18	77749,-1411
chr11:65485720-65486825	chr11	+	65485855	65486609	True	NM_182709,NM_006388,NM_182710,NM_032193	chr11,chr11,chr11,chr11	+,+,+,-	KAT5,KAT5,KAT5,RNASEH2C	-6417,-6417,-6417,1850
chr17:16391943-16392237	chr17	+	16391957	16392249	True	NR_003054,NM_207387,NM_001113567	chr17,chr17,chr17	+,-,-	SNORD65,C17orf76,C17orf76	-47469,3281,3281
chr8:71315962-71316203	chr8	+	71315994	71316160	True	NM_006540,NM_001011720	chr8,chr8	-,+	NCOA2,XKR9	4,265439
chr19:55086773-55087094	chr19	+	55086778	55086876	True	NM_001130917,NM_006866,NM_145057	chr19,chr19,chr19	+,+,-	LILRA2,LILRA2,CDC42EP5	-1572,-1572,-102356
chr19:39825580-39825930	chr19	+	39825812	39825952	True	NM_018028,NM_004877	chr19,chr19	+,-	SAMD4B,GMFG	7155,824
chr11:118230305-118230642	chr11	+	118230309	118230681	True	NM_004788,NM_001040651,NM_001204077	chr11,chr11,chr11	+,-,+	UBE4A,CD3D,UBE4A	-64,-16850,-64
chr4:122076276-122078039	chr4	+	122076408	122077986	True	NM_024873,NR_024365	chr4,chr4	-,+	TNIP3,LOC100192379	7544,607753
chr1:6662519-6662732	chr1	+	6662527	6662667	True	NM_014851,NM_153812	chr1,chr1	-,+	KLHL21,PHF13	312,11088
chr9:139012078-139012299	chr9	+	139012112	139012348	True	NM_015597,NM_152833	chr9,chr9	+,-	GPSM1,C9orf69	209583,-1381
chr19:53235445-53236061	chr19	+	53235845	53235916	True	NR_023311,NM_001161499,NM_001161500,NM_001161501,NM_030972	chr19,chr19,chr19,chr19,chr19	+,-,-,-,-	ZNF137P,ZNF611,ZNF611,ZNF611,ZNF611	-135970,2444,2444,2434,-2710
chrX:47342688-47343017	chrX	+	47342699	47343061	True	NM_001654,NM_153380,NM_007130	chrX,chrX,chrX	+,-,-	ARAF,ZNF41,ZNF41	77454,-354,-354
chr12:50024378-50025825	chr12	+	50024732	50025795	True	NM_012272,NM_001031698,NM_032130	chr12,chr12,chr12	+,+,-	PRPF40B,PRPF40B,FAM186B	-7381,-457,-25299
chr1:184920780-184921621	chr1	+	184920848	184921600	True	NM_052966,NM_007212	chr1,chr1	-,+	FAM129A,RNF2	22134,92950
chr1:55352275-55352524	chr1	+	55352319	55352573	True	NM_014762,NM_152607	chr1,chr1	-,+	DHCR24,C1orf177	398,-80634
chr14:105393901-105394578	chr14	+	105394003	105394365	True	NM_138420,NM_138790	chr14,chr14	-,+	AHNAK2,PLD4	50379,-2867
chr20:30226015-30226374	chr20	+	30226024	30226338	True	NM_032609,NM_001191	chr20,chr20	+,-	COX4I2,BCL2L1	-384,84368
chr6:170162937-170163166	chr6	+	170162941	170163063	True	NM_018341,NM_174910	chr6,chr6	+,-	C6orf70,TCTE3	-11271,-11303
chrX:11777785-11779595	chrX	+	11777964	11779580	True	NM_078628,NM_006800,NM_001193270,NM_006125,NM_078629	chrX,chrX,chrX,chrX,chrX	+,+,+,-,+	MSL3,MSL3,MSL3,ARHGAP6,MSL3	-1745,-288,-1314,-94143,-1745
chr2:71222717-71223487	chr2	+	71222717	71223225	True	NM_144582,NM_024933	chr2,chr2	-,+	TEX261,ANKRD53	-716,-17193
chr15:90196939-90197399	chr15	+	90197105	90197173	True	NM_020212,NM_198525	chr15,chr15	+,-	WDR93,KIF7	36854,1559
chr9:134407834-134408656	chr9	+	134407919	134408595	True	NM_001135954,NM_007171,NM_031432	chr9,chr9,chr9	-,+,-	UCK1,POMT1,UCK1	-1257,-29681,-1257
chr1:218481572-218482947	chr1	+	218481730	218482755	True	NM_016052,NM_018040	chr1,chr1	+,-	RRP15,GPATCH2	-23155,-677321
chr2:154333773-154334292	chr2	+	154333901	154334245	True	NM_019845,NM_052917	chr2,chr2	-,+	RPRM,GALNT13	1128,394180
chr12:105502836-105503631	chr12	+	105502883	105503430	True	NR_027752,NM_015275	chr12,chr12	-,+	ALDH1L2,KIAA1033	-24542,-1451
chr12:71539153-71540819	chr12	+	71539155	71540563	True	NM_003667,NM_004616	chr12,chr12	+,-	LGR5,TSPAN8	293249,11274
chr2:219435999-219436763	chr2	+	219436067	219436777	True	NM_020935,NM_005444	chr2,chr2	-,+	USP37,RQCD1	-2983,-2440
chr3:9932700-9933406	chr3	+	9932878	9933406	True	NM_001199552,NM_032492	chr3,chr3	-,+	CIDEC,JAGN1	-10940,-664
chr19:49256669-49256889	chr19	+	49256672	49256748	True	NM_019113,NM_000148,NM_182575	chr19,chr19,chr19	+,-,-	FGF21,FUT1,IZUMO1	2595,1949,-6506
chr10:75632091-75632747	chr10	+	75632132	75632796	True	NM_001222,NM_172171,NM_172170,NM_172173,NM_001204492,NM_001145031,NM_172169	chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,-,+,-	CAMK2G,CAMK2G,CAMK2G,CAMK2G,CAMK2G,PLAU,CAMK2G	1603,1603,1603,1603,1603,38065,1603
chr6:118260188-118260818	chr6	+	118260365	118260864	True	NM_020399,NM_001029858	chr6,chr6	-,+	GOPC,SLC35F1	-336660,-31734
chr4:174292703-174292939	chr4	+	174292738	174292822	True	NM_007281,NM_003864	chr4,chr4	-,+	SCRG1,SAP30	27845,-696
chr16:4540851-4541370	chr16	+	4540929	4541325	True	NM_020677,NM_001127205	chr16,chr16	-,+	NMRAL1,HMOX2	-16033,4533
chr17:36831440-36831950	chr17	+	36831510	36831900	True	NM_005937,NM_001130677	chr17,chr17	+,-	MLLT6,C17orf96	29972,-323
chr5:176828714-176829107	chr5	+	176828827	176829129	True	NM_001029886,NM_000505,NM_003052	chr5,chr5,chr5	-,-,+	PFN3,F12,SLC34A1	-1190,7498,-17446
chr1:110308248-110309915	chr1	+	110308461	110309969	True	NM_139053,NM_000851,NM_133181,NM_024526	chr1,chr1,chr1,chr1	-,+,-,-	EPS8L3,GSTM5,EPS8L3,EPS8L3	-1817,-53648,-1817,-1817
chr17:79870378-79871803	chr17	+	79870683	79871729	True	NM_016538,NM_002861,NM_148896,NM_001184917,NM_032711,NR_033682,NR_033683,NR_033681,NR_033685	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,-,-,-,-,-,-	SIRT7,PCYT2,NPB,PCYT2,MAFG,PCYT2,PCYT2,PCYT2,PCYT2	4379,-1343,-10662,-1343,9729,-1343,-1606,-1343,-1606
chr9:71790693-71791168	chr9	+	71790803	71791145	True	NM_001170630,NM_201629,NM_002732,NM_004817	chr9,chr9,chr9,chr9	+,+,-,+	TJP2,TJP2,PRKACG,TJP2	-1894,-1894,-161764,-1894
chr20:6023419-6024271	chr20	+	6023578	6024174	True	NM_001127458,NM_152611	chr20,chr20	+,-	CRLS1,LRRN4	-35731,10570
chr10:75500400-75500744	chr10	+	75500725	75500793	True	NM_198597,NR_026592,NM_004922	chr10,chr10,chr10	+,-,+	SEC24C,BMS1P4,SEC24C	3337,-10453,3337
chr10:75500400-75500744	chr10	-	88786727	88786795	False	NM_005271,NM_001146157	chr10,chr10	-,+	GLUD1,FAM25A	68031,-6732
chr17:34270859-34272498	chr17	+	34271001	34272184	True	NM_001199951,NM_002988,NM_020426	chr17,chr17,chr17	-,+,-	LYZL6,CCL18,LYZL6	-298,119458,-4441
chr8:39621307-39622193	chr8	+	39621343	39622219	True	NM_001464,NM_002164	chr8,chr8	-,+	ADAM2,IDO1	73610,149108
chr19:55215509-55216426	chr19	+	55215559	55216431	True	NR_003061,NM_145057	chr19,chr19	+,-	LILRP2,CDC42EP5	3169,-231137
chr9:34656187-34657510	chr9	+	34656419	34657541	True	NM_147162,NM_001142784,NM_000155,NM_004512,NM_006664	chr9,chr9,chr9,chr9,chr9	+,+,+,+,-	IL11RA,IL11RA,GALT,IL11RA,CCL27	-2538,-4288,-9835,-2538,5198
chr11:8931755-8932031	chr11	+	8931788	8931940	True	NM_020642,NM_005418,NM_182901	chr11,chr11,chr11	+,-,+	C11orf17,ST5,C11orf17	760,608,861
chr15:67356385-67356647	chr15	+	67356403	67356581	True	NM_005902,NM_024666	chr15,chr15	+,-	SMAD3,AAGAB	1613,190543
chr5:176450232-176451320	chr5	+	176450377	176450956	True	NM_012279,NM_001199298	chr5,chr5	+,-	ZNF346,UIMC1	-731,-16582
chr9:102668252-102668852	chr9	+	102668266	102668838	True	NM_017919,NM_015051	chr9,chr9	+,-	STX17,ERP44	76,192542
chr1:59249543-59249984	chr1	+	59249589	59249941	True	NM_002228,NR_034014,NR_034015	chr1,chr1,chr1	-,+,+	JUN,LOC100131060,LOC100131060	74,881,881
chrX:70836343-70836825	chrX	+	70836408	70836762	True	NM_001142797,NM_052957,NM_001504	chrX,chrX,chrX	-,+,-	CXCR3,ACRC,CXCR3	1655,-38585,1655
chr12:53841804-53843305	chr12	+	53842177	53843104	True	NM_001128911,NM_001128912,NM_001128913,NM_001128914,NM_031989,NM_005016,NM_001005354,NM_001193511,NM_018457,NM_001098620	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,+,+,+,+,+,-,+,+	PCBP2,PCBP2,PCBP2,PCBP2,PCBP2,PCBP2,PRR13,MAP3K12,PRR13,PCBP2	2781,2781,2781,2781,2781,2781,-6799,50399,-6799,2781
chr12:8234955-8236071	chr12	+	8235035	8235943	True	NM_004054,NM_015509,NR_024260	chr12,chr12,chr12	-,+,+	C3AR1,NECAP1,NECAP1	-16080,-279,-279
chr6:49804345-49805170	chr6	+	49804453	49805158	True	NM_001145652,NM_001131	chr6,chr6	+,-	C6orf141,CRISP1	-286398,29117
chr5:41152798-41153772	chr5	+	41152800	41153796	True	NM_000587,NM_000065	chr5,chr5	+,-	C7,C6	-243259,59921
chr7:128767955-128768843	chr7	+	128767954	128768684	True	NR_002144,NR_034053	chr7,chr7	+,-	LOC407835,TNPO3	-1680,-72727
chr11:1891870-1892184	chr11	+	1891892	1892214	True	NR_036185,NM_001013254,NM_001013255,NM_001013253	chr11,chr11,chr11,chr11	-,+,+,+	MIR4298,LSP1,LSP1,LSP1	-11126,0,41,-2040
chr3:44039460-44039848	chr3	+	44039515	44039727	True	NM_001204834,NR_029700	chr3,chr3	-,+	ANO10,MIR138-1	-375955,115976
chr1:53162137-53163335	chr1	+	53162149	53163102	True	NM_024646,NM_023077	chr1,chr1	+,-	ZYG11B,SELRC1	29028,986
chr11:61596770-61596994	chr11	+	61596779	61596911	True	NM_013402,NM_004265	chr11,chr11	-,+	FADS1,FADS2	-12250,-1117
chr5:32711645-32711943	chr5	+	32711678	32711912	True	NM_001204376,NM_000908,NM_001204375,NM_016107	chr5,chr5,chr5,chr5	+,+,+,-	NPR3,NPR3,NPR3,ZFR	-992,-297,-297,-266834
chr6:111136857-111138083	chr6	+	111136862	111137864	True	NM_001634,NM_015076	chr6,chr6	+,-	AMD1,CDK19	58122,-450
chr9:101476093-101477046	chr9	+	101476305	101477057	True	NM_024642,NM_005458	chr9,chr9	+,-	GALNT12,GABBR2	92923,-4826
chr1:47078258-47078672	chr1	+	47078419	47078645	True	NM_201403,NM_198973,NM_001145474,NM_003684,NR_024174,NM_001135553,NR_024176,NM_145279	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,+,-,-,-,-,-	MOBKL2C,MKNK1,C1orf223,MKNK1,MKNK1,MKNK1,MKNK1,MOBKL2C	3968,-8453,58854,-8453,-8453,-8453,-8453,2210
chr3:69855530-69855868	chr3	+	69855703	69855895	True	NM_015123,NM_006722	chr3,chr3	-,+	FRMD4B,MITF	-420273,-42800
chr3:197478371-197478833	chr3	+	197478623	197478705	True	NM_032288,NM_001145642,NR_027840,NM_001011537	chr3,chr3,chr3,chr3	+,-,+,+	FYTTD1,KIAA0226,FYTTD1,FYTTD1	-2057,-2055,-1420,-2257
chr10:102107497-102108202	chr10	+	102107499	102108187	True	NM_016112,NM_005063	chr10,chr10	-,+	PKD2L1,SCD	-17256,-778
chr3:50376214-50377169	chr3	+	50376220	50377195	True	NM_015896,NM_007022,NM_007182,NM_170713,NM_170712,NM_170714	chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-	ZMYND10,CYB561D2,RASSF1,RASSF1,RASSF1,RASSF1	6011,11101,1222,-1325,-556,1222
chr2:134323077-134324870	chr2	+	134323334	134324890	True	NM_207363,NM_207481,NR_037450	chr2,chr2,chr2	-,-,+	NCKAP5,NCKAP5,MIR3679	1191,1191,559805
chr19:17571721-17572782	chr19	+	17571756	17571906	True	NM_198580,NM_138454	chr19,chr19	+,-	SLC27A1,NXNL1	9393,-31
chr21:15559786-15561441	chr21	+	15559787	15561498	True	NM_144770,NM_198996	chr21,chr21	+,-	RBM11,LIPI	26967,17814
chr17:34593192-34594162	chr17	+	34593242	34593930	True	NM_001001435,NM_001001418	chr17,chr17	+,-	CCL4L1,TBC1D3C	46103,-1215
chr17:34593192-34594162	chr17	-	36282627	36282756	False	NM_032258,NR_024178,NM_001123391	chr17,chr17,chr17	+,-,+	TBC1D3F,LOC284100,TBC1D3	1203,-38264,1203
chr17:34593192-34594162	chr17	+	34505198	34505327	False	NM_001001417,NM_001001435	chr17,chr17	-,+	TBC1D3B,CCL4L1	-1210,33140
chr17:34593192-34594162	chr17	+	34758257	34758386	False	NM_001123392,NM_004773	chr17,chr17	-,+	TBC1D3H,ZNHIT3	-1207,84086
chr17:34593192-34594162	chr17	+	34809306	34809994	False	NM_001001418,NM_004773,NM_001040282	chr17,chr17,chr17	-,+,-	TBC1D3C,ZNHIT3,TBC1D3G	-1215,32478,-1203
chr3:57742842-57743318	chr3	+	57742892	57743344	True	NM_007159,NM_152678	chr3,chr3	+,-	SLMAP,FAM116A	69,-64076
chr19:36984220-36986116	chr19	+	36984873	36986123	True	NM_001145344,NM_001145345,NM_032838,NR_036504,NM_001145343	chr19,chr19,chr19,chr19,chr19	-,-,-,+,-	ZNF566,ZNF566,ZNF566,LOC728752,ZNF566	-4410,-4410,-4536,-4395,-4410
chr10:101941564-101942079	chr10	+	101941612	101942128	True	NM_006459,NM_005063,NM_001100626	chr10,chr10,chr10	-,+,-	ERLIN1,SCD,ERLIN1	3656,164643,3736
chr1:210406791-210407177	chr1	+	210406820	210407188	True	NR_024337,NM_019605	chr1,chr1	-,+	C1orf133,SERTAD4	328,-676
chr10:100029595-100029886	chr10	+	100029722	100029934	True	NM_014472,NM_032211	chr10,chr10	+,-	C10orf28,LOXL4	-135392,-1715
chr14:23627846-23629499	chr14	+	23627848	23629484	True	NM_017924,NM_182728	chr14,chr14	+,-	C14orf119,SLC7A8	-63114,-4238
chr21:15219364-15219574	chr13	+	19316211	19316295	False	NR_027995,NR_026852	chr13,chr13	-,+	LOC284232,LOC348021	129864,266103
chr21:15219364-15219574	chr18	-	14338469	14338553	False	NR_024076,NR_026756	chr18,chr18	-,+	CXADRP3,LOC284233	160202,-1098
chr21:15219364-15219574	chr21	+	15219369	15219505	True	NM_174981,NR_026755	chr21,chr21	+,-	POTED,C21orf15	-236922,1230
chr11:45690600-45692033	chr11	+	45690685	45691982	True	NR_027134,NM_003654	chr11,chr11	+,-	DKFZp779M0652,CHST1	101000,-3513
chr19:15048832-15050519	chr19	+	15049305	15050179	True	NM_005071,NM_012377	chr19,chr19	-,+	SLC1A6,OR7C2	33614,2121
chr19:15164587-15165980	chr19	+	15164592	15165790	True	NM_006844,NM_012114	chr19,chr19	-,+	ILVBL,CASP14	70837,-4352
chr1:165520567-165521121	chr1	+	165520629	165521171	True	NM_001005214,NR_026744	chr1,chr1	+,-	LRRC52,LOC400794	-7215,30222
chr13:45916445-45916952	chr13	+	45916531	45916829	True	NR_002967,NM_003295,NR_024458	chr13,chr13,chr13	-,-,+	SNORA31,TPT1,LOC100190939	-4787,-1234,-1111
chr1:25596431-25597057	chr1	+	25596518	25596682	True	NM_001127691,NM_020317,NM_016124	chr1,chr1,chr1	+,-,+	RHD,C1orf63,RHD	2298,-22533,2298
chr14:90797488-90798289	chr14	+	90797607	90798285	True	NM_199043,NM_017970,NM_006888	chr14,chr14,chr14	-,-,+	C14orf102,C14orf102,CALM1	44,44,65041
chr4:183839134-183839797	chr4	+	183839204	183839769	True	NR_003612,NM_001921,NM_001012732	chr4,chr4,chr4	+,-,-	FAM92A3,DCTD,DCTD	119048,-574,-574
chr12:119733041-119734213	chr12	+	119733149	119734153	True	NR_024246,NM_178499	chr12,chr12	-,+	LOC144742,CCDC60	7082,38363
chr20:983216-983416	chr20	+	983284	983446	True	NM_001040007,NM_001029871,NM_178578	chr20,chr20,chr20	-,-,+	RSPO4,RSPO4,PSMF1	-377,-377,110459
chr12:98986421-98987240	chr12	+	98986536	98987168	True	NM_005888,NR_003015,NM_002635,NM_213611,NM_201612	chr12,chr12,chr12,chr12,chr12	+,+,+,+,-	SLC25A3,SNORA53,SLC25A3,SLC25A3,IKBIP	234,6244,234,234,51471
chr8:63979600-63981433	chr8	+	63979854	63981217	True	NR_027378,NM_000370	chr8,chr8	+,-	LOC643763,TTPA	-89492,17451
chr20:55041927-55042671	chr20	+	55042221	55042506	True	NM_080615,NM_016407	chr20,chr20	-,+	GCNT7,C20orf43	58536,1140
chr10:135173030-135173230	chr10	+	135173151	135173219	True	NM_145202,NM_001098483,NM_198472	chr10,chr10,chr10	+,-,-	PRAP1,C10orf125,C10orf125	-12358,-1622,-1622
chr12:108154457-108154683	chr12	+	108154622	108154686	True	NM_012406,NM_203436	chr12,chr12	-,+	PRDM4,ASCL4	278,13475
chr4:76484603-76485455	chr4	+	76484682	76485486	True	NR_037914,NM_178497	chr4,chr4	-,+	RCHY1,C4orf26	-45042,-3476
chr17:4635748-4637358	chr17	+	4635900	4637172	True	NM_001100812,NM_001136046,NM_032265,NM_001001683,NM_022059	chr17,chr17,chr17,chr17,chr17	-,+,+,+,-	CXCL16,ZMYND15,ZMYND15,MED11,CXCL16	6101,6146,6164,-1228,6101
chr8:40755557-40755837	chr8	+	40755687	40755881	True	NM_001174124,NM_024645,NM_001135731	chr8,chr8,chr8	+,-,-	GOLGA7,ZMAT4,ZMAT4	592199,-344,-344
chr16:15949337-15949715	chr16	+	15949390	15949764	True	NM_002474,NM_001040113,NM_004996,NM_001040114,NM_022844	chr16,chr16,chr16,chr16,chr16	-,-,+,-,-	MYH11,MYH11,ABCC1,MYH11,MYH11	1173,1173,93669,1173,1173
chr10:6391424-6392899	chr10	+	6391725	6392922	True	NM_004566,NM_006257	chr10,chr10	+,-	PFKFB3,PRKCQ	-146946,229367
chr8:87357153-87357797	chr8	+	87357214	87357630	True	NM_007013,NM_138817	chr8,chr8	+,-	WWP1,SLC7A13	-2271,-114610
chr7:74686254-74688242	chr7	+	74686280	74688047	True	NM_001003795,NR_003580	chr7,chr7	+,-	GTF2IRD2B,LOC100093631	-177984,-32821
chr7:74686254-74688242	chr7	+	99886249	99886299	False	NM_001004351,NR_028038	chr7,chr7	+,-	SPDYE3,GATS	19025,-16394
chr7:74686254-74688242	chr7	-	72534588	72536355	False	NR_003664,NR_003580	chr7,chr7	-,+	SPDYE8P,LOC100093631	-34279,32656
chr7:74686254-74688242	chr7	-	74344082	74345849	False	NM_001025202,NM_001145063	chr7,chr7	-,+	STAG3L2,GATSL1	-37351,33233
chr7:74686254-74688242	chr7	+	74900537	74902304	False	NM_001145064,NR_003664	chr7,chr7	-,+	GATSL2,SPDYE8P	-33196,34228
chr16:86611438-86611643	chr16	+	86611582	86611664	True	NM_005250,NR_027490	chr16,chr16	+,-	FOXL1,MTHFSD	450,-22741
chr17:28267388-28267777	chr17	+	28267388	28267758	True	NM_198529,NR_026738,NM_033389	chr17,chr17,chr17	+,+,-	EFCAB5,EFCAB5,SSH2	864,864,-10370
chr2:121101163-121101376	chr2	+	121101259	121101333	True	NM_002193,NR_000034	chr2,chr2	+,-	INHBB,TMEM185B	2385,-120275
chr1:119534704-119535672	chr1	+	119534765	119535606	True	NM_001005783,NM_152380	chr1,chr1	+,-	HAO2,TBX15	375795,-2586
chr6:14729651-14730221	chr6	+	14729661	14730236	True	NM_001031713,NM_004973	chr6,chr6	-,+	CCDC90A,JARID2	-914872,516290
chr4:139695339-139697252	chr4	+	139695820	139697282	True	NM_006874,NM_012118	chr4,chr4	-,+	ELF2,CCRN4L	308415,239660
chr15:40545509-40545744	chr15	+	40545628	40545688	True	NM_020168,NM_001039905	chr15,chr15	+,-	PAK6,C15orf56	-13644,-518
chr1:156469233-156469661	chr1	+	156469261	156469654	True	NM_001105669,NM_005920	chr1,chr1	+,-	TTC24,MEF2D	79864,925
chr1:156561570-156561810	chr1	+	156561630	156561798	True	NM_144772,NM_182679,NM_015590	chr1,chr1,chr1	+,-,-	APOA1BP,GPATCH4,GPATCH4	-123,9531,9531
chr10:72432720-72433270	chr10	+	72432858	72433206	True	NM_139155,NM_080722,NM_005041	chr10,chr10,chr10	+,+,-	ADAMTS14,ADAMTS14,PRF1	-350,-350,-70327
chr7:25017397-25018642	chr7	+	25017659	25018627	True	NM_145321,NM_145322,NM_145320,NM_015550,NM_016447	chr7,chr7,chr7,chr7,chr7	-,-,-,-,+	OSBPL3,OSBPL3,OSBPL3,OSBPL3,MPP6	1183,1183,1183,1183,-404633
chr1:45205138-45205641	chr1	+	45205171	45205673	True	NM_006845,NM_153274	chr1,chr1	+,-	KIF2C,BEST4	-36,47803
chr1:152283853-152284380	chr1	+	152284085	152284369	True	NM_002016,NM_178438	chr1,chr1	-,+	FLG,LCE5A	13360,198950
chr15:22896144-22896815	chr15	+	22896192	22896527	True	NM_014608,NM_001008860	chr15,chr15	+,-	CYFIP1,NIPA2	-3568,137957
chr5:138873621-138873945	chr5	+	138873887	138873993	True	NM_198282,NM_003339	chr5,chr5	-,+	TMEM173,UBE2D2	-11544,66757
chrX:18373604-18374249	chrX	+	18373603	18374170	True	NM_006089,NR_033717,NM_003159	chrX,chrX,chrX	-,-,+	SCML2,SCML2,CDKL5	-759,-759,69554
chr18:44085439-44086059	chr18	+	44085438	44085912	True	NM_001173129,NM_152470	chr18,chr18	-,+	LOXHD1,RNF165	13187,-171308
chr4:25523259-25524347	chr4	+	25523842	25524189	True	NM_015187,NM_001177998	chr4,chr4	-,+	SEL1L3,SLC34A2	340472,133245
chr19:10489086-10489692	chr19	+	10489197	10489385	True	NM_001111307,NM_003331	chr19,chr19	+,-	PDE4A,TYK2	41947,1917
chr8:7691686-7692552	chr8	+	7691791	7692424	True	NM_080389,NM_001040702,NM_152251,NM_001040704,NM_152250	chr8,chr8,chr8,chr8,chr8	+,+,+,+,-	DEFB104A,DEFB104B,DEFB106A,DEFB106B,DEFB105A	1568,1568,-9154,-9154,-10431
chr8:7691686-7692552	chr8	-	7334302	7334612	False	NM_080389,NM_001040702,NM_152251,NM_001040704,NM_001040703	chr8,chr8,chr8,chr8,chr8	-,-,-,-,+	DEFB104A,DEFB104B,DEFB106A,DEFB106B,DEFB105B	-1698,-1698,9356,9356,10630
chr8:88885860-88886241	chr8	+	88885948	88886284	True	NM_152418,NM_173538	chr8,chr8	-,+	DCAF4L2,CNBD1	62,-1007323
chr10:97516345-97517563	chr10	+	97516374	97517477	True	NM_001164178,NM_001164179,NM_001776,NM_001164183,NM_001164182,NM_001164181,NM_001143973	chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,+,-	ENTPD1,ENTPD1,ENTPD1,ENTPD1,ENTPD1,ENTPD1,TCTN3	-1016,-752,-752,-752,-752,-1016,-62474
chr9:32384701-32384940	chr9	+	32384772	32384836	True	NM_014314,NM_002197	chr9,chr9	-,+	DDX58,ACO1	141536,-222
chr7:20042355-20043365	chr7	+	20042993	20043391	True	NM_182762,NM_002214	chr7,chr7	-,+	MACC1,ITGB8	213672,327333
chr4:83295746-83296396	chr4	+	83295753	83296402	True	NM_001003810,NM_031369,NM_021204,NM_002138,NM_031370	chr4,chr4,chr4,chr4,chr4	-,-,+,-,-	HNRNPD,HNRNPD,ENOPH1,HNRNPD,HNRNPD	-604,-604,55323,-604,-604
chr9:136288737-136290364	chr9	+	136288844	136290394	True	NR_024514,NM_020385,NM_139026,NM_139027,NM_139025	chr9,chr9,chr9,chr9,chr9	+,-,+,+,+	ADAMTS13,REXO4,ADAMTS13,ADAMTS13,ADAMTS13	-9436,-5680,-1775,-1775,-1775
chr3:194071992-194072214	chr3	+	194072005	194072215	True	NM_001080513,NR_033929	chr3,chr3	-,+	CPN2,FLJ34208	52,135653
chr10:18940324-18940560	chr10	+	18940364	18940586	True	NM_178815,NM_182543	chr10,chr10	+,-	ARL5B,NSUN6	7726,14
chr12:16762829-16763421	chr12	+	16762919	16763467	True	NM_018640,NM_001001395,NM_145764	chr12,chr12,chr12	-,-,+	LMO3,LMO3,MGST1	-3488,-1895,-256619
chr13:32890994-32892700	chr13	+	32891492	32892532	True	NM_000059,NM_001136571	chr13,chr13	+,-	BRCA2,ZAR1L	-1939,-5401
chr7:99686874-99687692	chr7	+	99686918	99687693	True	NM_017715,NR_029831,NR_029498,NR_029510,NM_032924,NM_006833	chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,+	ZNF3,MIR106B,MIR25,MIR93,ZNF3,COPS6	-7547,4061,3630,3834,-7547,-386
chr19:3986287-3986863	chr19	+	3986345	3986766	True	NR_002602,NM_015897,NM_001961	chr19,chr19,chr19	-,+,-	SNORD37,PIAS4,EEF2	-3775,20982,-884
chr15:41245744-41246085	chr15	+	41245851	41245975	True	NM_024111,NM_133639,NM_001142776	chr15,chr15,chr15	+,-,+	CHAC1,RHOV,CHAC1	-266,-79364,-266
chr19:14640666-14640970	chr19	+	14640665	14640889	True	NR_038104,NR_030369,NM_138501,NM_006145,NR_038103	chr19,chr19,chr19,chr19,chr19	+,+,+,-,+	TECR,MIR639,TECR,DNAJB1,TECR	-337,-361,-337,-11464,-337
chr19:8212813-8213087	chr19	+	8212869	8213135	True	NM_024552,NM_032447	chr19,chr19	+,-	LASS4,FBN3	61081,-484
chr7:97361162-97361419	chr7	+	97361190	97361309	True	NM_001178077,NM_013997,NM_013996,NM_003182,NM_013998	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	ASNS,TAC1,TAC1,TAC1,TAC1	140219,-2,-2,-2,-2
chr1:173612575-173614054	chr1	+	173612822	173613691	True	NM_001195190,NM_198493	chr1,chr1	+,-	LOC730159,ANKRD45	-8213,25366
chr19:12847404-12847733	chr19	+	12847404	12847664	True	NM_024038,NM_004317	chr19,chr19	-,+	C19orf43,ASNA1	-1875,641
chr2:102803682-102804253	chr2	+	102803701	102804277	True	NM_003854,NM_032718	chr2,chr2	+,-	IL1RL2,MFSD9	-319,549110
chr16:33488499-33489627	chr16	+	33488801	33489659	True	NR_033866,NM_001205265	chr16,chr16	-,+	LOC390705,TP53TG3B	-190099,-226740
chr12:49050348-49050885	chr12	+	49050420	49050763	True	NR_031623,NR_002950,NR_029448,NR_002968	chr12,chr12,chr12,chr12	-,-,+,-	MIR1291,SNORA2A,LOC255411,SNORA34	-2107,-27,70454,-2119
chr6:141194860-141195667	chr6	+	141195143	141195306	True	NR_037441,NM_002511	chr6,chr6	+,-	MIR3668,NMBR	-668818,1214687
chr12:10874821-10875195	chr12	+	10874835	10875219	True	NM_003651,NM_001145426,NM_005042	chr12,chr12,chr12	-,-,+	CSDA,CSDA,PRH2	784,784,206614
chr1:156165325-156165863	chr1	+	156165397	156165857	True	NM_014655,NM_198406	chr1,chr1	+,-	SLC25A44,PAQR6	-1725,51985
chr22:43733522-43734928	chr22	+	43733767	43734946	True	NM_173050,NM_001044370	chr22,chr22	-,+	SCUBE1,MPPED1	4459,73073
chr18:61090014-61091272	chr18	+	61090035	61091073	True	NM_004869,NM_002639	chr18,chr18	-,+	VPS4B,SERPINB5	-283,53070
chr8:30603356-30604594	chr8	+	30603614	30604389	True	NM_005671,NM_001195104	chr8,chr8	+,-	UBXN8,GSR	-1980,-18128
chr12:71116040-71116342	chr12	+	71116053	71116371	True	NM_130846,NM_014505	chr12,chr12	-,+	PTPRR,KCNMB4	32044,-356043
chr15:58724214-58724669	chr15	+	58724286	58724673	True	NR_002927,NM_000236	chr15,chr15	-,+	HSP90AB4P,LIPC	260708,-162
chr11:74460555-74460851	chr11	+	74460580	74460899	True	NM_015424,NM_001098638	chr11,chr11	-,+	CHRDL2,RNF169	-18394,-718
chrX:49831267-49832146	chrX	+	49831360	49832159	True	NM_139289,NM_000084	chrX,chrX	-,+	AKAP4,CLCN5	132903,55
chr19:11485847-11486158	chr19	+	11485870	11486134	True	NM_000121,NM_175871,NR_033663	chr19,chr19,chr19	-,+,-	EPOR,C19orf39,EPOR	8934,-538,8934
chr9:130536143-130536457	chr9	+	130536258	130536492	True	NR_036055,NM_005489,NM_170600	chr9,chr9,chr9	+,-,-	MIR2861,SH2D3C,SH2D3C	11704,-2637,4606
chr12:69757066-69758693	chr12	+	69757345	69758742	True	NM_006530,NR_031692	chr12,chr12	+,-	YEATS4,MIR1279	-3879,-90347
chr2:87021446-87022187	chr2	+	87021459	87022027	True	NM_001768,NR_037931,NR_027353,NM_171827	chr2,chr2,chr2,chr2	-,+,-,-	CD8A,LOC100286979,CD8A,CD8A	-2622,66920,-2622,-2622
chr11:18347991-18349475	chr11	+	18348089	18349186	True	NM_007216,NM_005316,NM_181508,NM_001142307,NM_181507	chr11,chr11,chr11,chr11,chr11	-,+,-,+,-	HPS5,GTF2H1,HPS5,GTF2H1,HPS5	-4368,-4325,-4368,-4325,-4368
chr1:47323631-47325374	chr1	+	47323648	47325401	True	NM_001099772,NR_002788	chr1,chr1	+,-	CYP4B1,CYP4Z2P	-59029,40796
chr1:100582704-100583793	chr1	+	100582859	100583606	True	NM_019083,NM_194292	chr1,chr1	+,-	CCDC76,SASS6	15099,14958
chr8:144912250-144912539	chr8	+	144912253	144912511	True	NM_078480,NR_033849,NM_014281,NM_001136033	chr8,chr8,chr8,chr8	-,+,-,-	PUF60,LOC100128338,PUF60,PUF60	-716,-95995,-716,-1057
chr20:60759680-60760390	chr20	+	60759694	60759894	True	NM_007232,NM_015666	chr20,chr20	-,+	HRH3,GTPBP5	35485,-1664
chr3:183901780-183902487	chr3	+	183901792	183902385	True	NM_005787,NM_001025205,NM_018358,NM_004068	chr3,chr3,chr3,chr3	-,+,+,+	ALG3,AP2M1,ABCF3,AP2M1	64425,-9209,1477,-9209
chr11:49455204-49455849	chr11	+	49455205	49455890	True	NR_027044,NM_004476	chr11,chr11	+,-	LOC440040,FOLH1	124189,-224983
chr7:151134531-151134979	chr7	+	151134561	151134991	True	NR_034013,NM_144727,NR_037468	chr7,chr7,chr7	+,-,-	LOC100131176,CRYGN,MIR3907	-28290,2158,-3836
chr2:159825831-159826120	chr2	+	159825854	159825924	True	NM_152528,NM_001145909,NM_033394	chr2,chr2,chr2	-,+,+	WDSUB1,TANC1,TANC1	317189,-761,-761
chrX:11776851-11777110	chrX	+	11776861	11777107	True	NM_078628,NM_078629,NM_001193270,NM_006125,NM_006800	chrX,chrX,chrX,chrX,chrX	+,+,+,-,+	MSL3,MSL3,MSL3,ARHGAP6,MSL3	-634,-634,-203,-93040,627
chr7:131339649-131340587	chr7	+	131339787	131340620	True	NM_005397,NM_013255	chr7,chr7	-,+	PODXL,MKLN1	-98411,-327243
chr3:195452677-195452924	chr3	+	195452693	195452909	True	NM_001098516,NM_004532,NM_152673	chr3,chr3,chr3	+,-,+	MUC20,MUC4,MUC20	-1646,86289,-4991
chr3:195452677-195452924	chr3	+	195346356	195346418	False	NM_001647,NR_003265	chr3,chr3	-,+	APOD,SDHAP2	-35280,38491
chr17:19013771-19014086	chr17	+	19013846	19014084	True	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	16697,-63510
chr17:19013771-19014086	chr17	+	19140009	19140247	False	NM_014964,NM_148921,NM_001102664,NR_031591	chr17,chr17,chr17,chr17	+,+,+,-	EPN2,EPN2,EPN2,MIR1180	442,442,442,107690
chr9:6759673-6761302	chr9	+	6760060	6760956	True	NM_000170,NM_015061,NM_001146695,NM_001146694	chr9,chr9,chr9,chr9	-,+,+,+	GLDC,KDM4C,KDM4C,KDM4C	-114368,-2470,-2470,-2470
chr12:10362066-10362474	chr12	+	10362229	10362493	True	NM_031412,NM_002543	chr12,chr12	+,-	GABARAPL1,OLR1	2995,-37439
chr16:23652121-23652423	chr16	+	23652157	23652375	True	NM_001199011,NM_032486,NR_037573,NM_001199743,NM_024675	chr16,chr16,chr16,chr16,chr16	+,+,+,+,-	DCTN5,DCTN5,DCTN5,DCTN5,PALB2	311,311,311,311,353
chr2:85819846-85820135	chr2	+	85820058	85820136	True	NR_033179,NM_016494,NM_001031738,NM_006634	chr2,chr2,chr2,chr2	-,+,-,+	TMEM150A,RNF181,TMEM150A,VAMP5	9736,2700,9736,-8578
chr12:4432592-4432841	chr12	+	4432664	4432886	True	NM_020638,NM_020375	chr12,chr12	-,+	FGF23,C12orf5	56063,-2370
chrX:135964080-135965782	chrX	+	135964451	135965545	True	NM_001164803,NR_002735,NM_002139,NM_000074,NR_028477,NR_028476	chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,+,-,-	RBMX,SNORD61,RBMX,CD40LG,RBMX,RBMX	-1512,-3021,-1512,-234176,-1512,-1512
chr5:137473609-137474356	chr5	+	137473926	137474391	True	NM_003551,NM_005733	chr5,chr5	-,+	NME5,KIF20A	800,40025
chr6:79926991-79927450	chr6	+	79927052	79927458	True	NM_001201362,NM_001010844	chr6,chr6	-,+	HMGN3,IRAK1BP1	17047,-349914
chr9:100002931-100004484	chr9	+	100003098	100004274	True	NR_036528,NR_036529,NM_199005,NR_036526,NR_036527	chr9,chr9,chr9,chr9,chr9	+,+,-,+,+	LOC57653,LOC57653,ZNF322B,LOC100499484,LOC57653	-2441,-2441,-41188,-2441,-2441
chr10:118034152-118034582	chr10	+	118034158	118034582	True	NM_005264,NM_145793,NM_198515,NM_001145453	chr10,chr10,chr10,chr10	-,-,+,-	GFRA1,GFRA1,C10orf96,GFRA1	-1032,-2339,49357,-1362
chr10:88717442-88717856	chr10	+	88717503	88717893	True	NM_003087,NM_024756	chr10,chr10	+,-	SNCG,MMRN2	394,-78
chr5:73992681-73993478	chr5	+	73992812	73993278	True	NM_003633,NM_000521	chr5,chr5	-,+	ENC1,HEXB	-55563,-11907
chr9:124859922-124860367	chr9	+	124859935	124860393	True	NM_001139442,NM_194252,NM_198469	chr9,chr9,chr9	-,-,+	TTLL11,TTLL11,MORN5	-4050,-4050,61796
chr8:7415162-7415833	chr8	+	7415182	7415880	True	NM_001040705,NM_001136572	chr8,chr8	+,-	DEFB107B,FAM90A7	-61865,1404
chr8:7415162-7415833	chr8	-	7628468	7628549	False	NM_001164448,NM_001164447,NM_001037668	chr8,chr8,chr8	+,+,-	FAM90A9,FAM90A10,DEFB107A	-9668,-2021,44739
chr8:7415162-7415833	chr8	+	7422832	7422913	False	NM_001040705,NM_001136572	chr8,chr8	+,-	DEFB107B,FAM90A7	-69515,-5598
chr8:7415162-7415833	chr8	+	7407534	7408232	False	NM_001040705,NM_001136572	chr8,chr8	+,-	DEFB107B,FAM90A7	-54217,9052
chr1:55462305-55462616	chr1	+	55462363	55462637	True	NM_057176,NM_014762	chr1,chr1	+,-	BSND,DHCR24	1979,-109442
chr21:27021686-27023142	chr21	+	27021874	27023163	True	NM_021219,NM_080794	chr21,chr21	+,-	JAM2,MRPL39	-10338,-42073
chr1:25595293-25596431	chr1	+	25595750	25596436	True	NM_001127691,NM_020317,NM_016124	chr1,chr1,chr1	+,-,+	RHD,C1orf63,RHD	2544,-21765,2544
chr1:25595293-25596431	chr1	-	25750199	25750578	False	NM_020485,NM_138618,NM_138616,NM_138617,NM_018202	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	RHCE,RHCE,RHCE,RHCE,TMEM57	-2836,-2836,-2836,-2836,6809
chr19:51922747-51923355	chr19	+	51923047	51923399	True	NM_033130,NM_001171156,NM_001171157,NR_033235,NM_001171161,NM_001171160,NM_001171158,NM_001171159	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,+,-,-,-,-	SIGLEC10,SIGLEC10,SIGLEC10,LOC100129083,SIGLEC10,SIGLEC10,SIGLEC10,SIGLEC10	-1990,-1990,-1990,-3938,-1990,-1990,-1990,-1990
chr22:39715005-39715346	chr22	+	39715010	39715351	True	NM_001033853,NM_000967,NR_000028,NR_002439,NR_000026,NR_000027,NM_145731	chr22,chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,-,-,+	RPL3,RPL3,SNORD83B,SNORD43,RNU86,SNORD83A,SYNGR1	370,370,-5094,58,-2109,-3698,30602
chr10:104191815-104192182	chr10	+	104191851	104192167	True	NM_024040,NR_030169	chr10,chr10	-,+	CUEDC2,MIR146B	306,4101
chr7:131007622-131009039	chr7	+	131007966	131009047	True	NR_015431,NM_013255	chr7,chr7	-,+	FLJ43663,MKLN1	-214404,3547
chr12:120973944-120974963	chr12	+	120974276	120974799	True	NM_014868,NM_032314	chr12,chr12	+,-	RNF10,COQ5	-2195,-7312
chr21:22153551-22154298	chr21	+	22153619	22154176	True	NM_004540,NR_024090	chr21,chr21	+,-	NCAM2,C21orf131	216456,21301
chr22:40571989-40572219	chr22	+	40571993	40572119	True	NM_152512,NM_001162501,NM_015088	chr22,chr22,chr22	-,+,+	ENTHD1,TNRC6B,TNRC6B	-282199,1809,1809
chr10:105832803-105833562	chr10	+	105832812	105833564	True	NM_145247,NM_000494	chr10,chr10	+,-	MEIR5,COL17A1	48251,12124
chr12:104357147-104358189	chr12	+	104357169	104357913	True	NM_003211,NM_001135570	chr12,chr12	+,-	TDG,C12orf73	1679,-6176
chr1:180166404-180166628	chr1	+	180166424	180166664	True	NR_037642,NR_026900	chr1,chr1	-,+	LOC100527964,FLJ23867	77202,479
chr12:71543070-71543829	chr12	+	71543165	71543246	True	NM_003667,NM_004616	chr12,chr12	+,-	LGR5,TSPAN8	290566,8586
chr11:281189-281493	chr11	+	281201	281449	True	NM_025092,NM_001025295,NM_138329	chr11,chr11,chr11	+,-,+	ATHL1,IFITM5,NLRP6	7688,18127,-2682
chr16:30035328-30035552	chr16	+	30035331	30035593	True	NM_031478,NM_001109660,NM_001109659	chr16,chr16,chr16	-,+,+	FAM57B,C16orf92,C16orf92	6643,-727,-727
chr3:97595358-97597109	chr3	+	97595367	97596881	True	NM_001042533,NM_177976	chr3,chr3	-,+	MINA,ARL6	94393,-111823
chr15:23207631-23208024	chr15	+	23207733	23207999	True	NR_024074,NR_003521	chr15,chr15	+,-	GOLGA8IP,WHAMML1	47242,408
chr15:23207631-23208024	chr15	+	32828096	32828157	False	NM_199357,NR_036650	chr15,chr15	+,-	ARHGAP11A,LOC100288615	79533,-2154
chr15:23207631-23208024	chr15	-	30763970	30764031	False	NM_148911,NR_026858	chr15,chr15	-,+	CHRFAM7A,FAM7A1	-78106,100726
chr11:117185328-117185632	chr11	+	117185421	117185597	True	NM_014956,NM_138973,NM_012104,NM_138971,NM_138972	chr11,chr11,chr11,chr11,chr11	+,-,-,-,-	CEP164,BACE1,BACE1,BACE1,BACE1	12973,1425,1425,1425,1425
chrX:72220816-72222585	chrX	+	72220960	72222451	True	NR_026595,NM_001042506	chrX,chrX	-,+	NCRNA00246,PABPC1L2B	-57371,900
chrX:72220816-72222585	chrX	-	72300249	72301740	False	NM_001042506,NM_001012977	chrX,chrX	+,-	PABPC1L2B,PABPC1L2A	-76949,-898
chr15:74494570-74494898	chr15	+	74494577	74494801	True	NM_001199042,NM_001199040,NM_022369,NM_001142619,NM_001142618,NM_001142617,NM_001142620,NM_201526,NM_001199041	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,-,-,-,-,-,+,-	STRA6,STRA6,STRA6,STRA6,STRA6,STRA6,STRA6,ISLR,STRA6	469,7295,469,6620,805,6620,6620,-27723,5644
chr6:154375426-154376324	chr6	+	154375615	154376253	True	NM_001130699,NM_001145284	chr6,chr6	-,+	IPCEF1,OPRM1	275013,-15120
chr19:53935115-53935474	chr19	+	53935209	53935449	True	NM_001008401,NR_003148,NM_033341	chr19,chr19,chr19	+,+,-	ZNF761,LOC147804,BIRC8	-33,-19,-140334
chr19:36020324-36020866	chr19	+	36020493	36020853	True	NM_001166035,NM_001166034,NM_014364,NM_198538	chr19,chr19,chr19,chr19	-,-,+,-	SBSN,SBSN,GAPDHS,SBSN	-1240,-1240,3460,-1240
chr21:43187340-43187740	chr21	+	43187339	43187702	True	NR_024028,NM_020639	chr21,chr21	+,-	NCRNA00112,RIPK4	-50794,-90
chr12:45681090-45682689	chr12	+	45681245	45682352	True	NM_001142678,NR_037144	chr12,chr12	+,-	ANO6,PLEKHA8P1	4113,-71456
chr3:150279704-150280063	chr3	+	150279850	150279936	True	NM_014445,NM_032025	chr3,chr3	-,+	SERP1,EIF2A	-15422,-15327
chr11:27076969-27077895	chr11	+	27077017	27077609	True	NM_003986,NM_030771	chr11,chr11	+,-	BBOX1,CCDC34	-14559,307236
chr8:17271088-17271326	chr8	+	17271092	17271312	True	NM_001008539,NM_004686	chr8,chr8	+,-	SLC7A2,MTMR7	83284,-52
chr2:73431328-73431597	chr2	+	73431429	73431611	True	NM_006062,NM_032319,NM_001134462	chr2,chr2,chr2	+,-,+	SMYD5,C2orf7,NOTO	9754,28795,-2100
chr16:58127450-58128603	chr16	+	58127684	58128380	True	NM_013242,NM_002428	chr16,chr16	-,+	C16orf80,MMP15	34966,-68453
chr12:133272587-133273103	chr12	+	133272647	133273095	True	NM_018663,NM_006231	chr12,chr12	+,-	PXMP2,POLE	-8506,-8702
chr10:93035356-93036388	chr10	+	93035682	93036435	True	NR_002779,NM_032373	chr10,chr10	-,+	NUDT9P1,PCGF5	-122845,-55380
chr3:108031409-108032226	chr3	+	108031609	108032229	True	NM_007072,NM_018010	chr3,chr3	+,-	HHLA2,IFT57	-10328,-90192
chr6:160148227-160148465	chr6	+	160148316	160148398	True	NM_004906,NM_000636,NM_152857,NM_152858	chr6,chr6,chr6,chr6	+,-,+,+	WTAP,SOD2,WTAP,WTAP	-215,-33963,221,-215
chr22:23852937-23853139	chr22	+	23852957	23853151	True	NM_153615,NM_020070	chr22,chr22	+,-	RGL4,IGLL1	179896,69394
chr10:123924460-123924959	chr10	+	123924509	123924955	True	NM_006997,NM_017615,NM_206860	chr10,chr10,chr10	+,-,+	TACC2,NSMCE4A,TACC2	-1455,-189766,-1455
chr4:184826613-184826839	chr4	+	184826729	184826887	True	NM_020225,NM_152682	chr4,chr4	+,-	STOX2,RWDD4	-271,-246398
chr17:46907577-46908066	chr17	+	46907725	46907877	True	NM_005831,NM_001130918	chr17,chr17	+,-	CALCOCO2,TTLL6	494,-13256
chr12:76952896-76953212	chr12	+	76953078	76953240	True	NM_020841,NM_001003712,NM_015336	chr12,chr12,chr12	-,-,+	OSBPL8,OSBPL8,ZDHHC17	399,399,204613
chr9:101472727-101472936	chr9	+	101472780	101472930	True	NM_024642,NM_005458	chr9,chr9	+,-	GALNT12,GABBR2	97050,-1301
chr6:170163472-170163946	chr6	+	170163579	170163925	True	NM_018341,NM_174910	chr6,chr6	+,-	C6orf70,TCTE3	-11909,-11941
chr22:23851428-23851813	chr22	+	23851663	23851746	True	NM_153615,NM_020070	chr22,chr22	+,-	RGL4,IGLL1	181301,70800
chr4:93225127-93225404	chr4	+	93225156	93225350	True	NM_183049,NM_001510	chr4,chr4	-,+	TMSL3,GRID2	-1464887,199
chr11:66139174-66139426	chr11	+	66139181	66139247	True	NM_001532,NM_178864	chr11,chr11	-,+	SLC29A2,NPAS4	94,49227
chr1:151811630-151812031	chr1	+	151811736	151811888	True	NR_024237,NM_005060,NM_001136003	chr1,chr1,chr1	+,-,-	LOC100132111,RORC,C2CD4D	-842,-7388,1201
chr9:139641976-139643308	chr9	+	139641988	139643232	True	NM_178469,NR_033913,NM_198946,NM_001001712	chr9,chr9,chr9,chr9	-,+,-,-	LCN8,LOC100128593,LCN6,LCN10	9549,-1426,-8,-4577
chr12:29928055-29929714	chr12	+	29928229	29929583	True	NM_018099,NM_001193451,NM_175861	chr12,chr12,chr12	+,-,-	FAR2,TMTC1,TMTC1	-551682,7211,8160
chr5:781131-781953	chr5	+	781246	781938	True	NM_001166260,NM_024786	chr5,chr5	+,-	TRIP13,ZDHHC11	111030,69213
chr5:781131-781953	chr5	+	689187	689879	False	NM_018140,NM_007030	chr5,chr5	+,-	CEP72,TPPP	-76833,3681
chr6:107809355-107809640	chr6	+	107809359	107809533	True	NM_018013,NM_020381	chr6,chr6	+,-	SOBP,PDSS2	1783,-28580
chr2:217560499-217562382	chr2	+	217560666	217562291	True	NM_000597,NM_000599	chr2,chr2	+,-	IGFBP2,IGFBP5	-62593,-394
chr11:71905124-71905534	chr11	+	71905140	71905395	True	NM_016725,NM_000802,NM_005169,NM_016729,NM_016724	chr11,chr11,chr11,chr11,chr11	+,+,-,+,+	FOLR1,FOLR1,PHOX2A,FOLR1,FOLR1	-4596,-4239,49875,-2025,-4596
chr1:111743535-111744106	chr1	+	111743543	111744083	True	NM_024901,NM_001025197	chr1,chr1	-,+	DENND2D,CHI3L2	-262,26197
chr3:126112820-126113632	chr3	+	126112931	126113531	True	NM_182628,NM_014079	chr3,chr3	+,-	CCDC37,KLF15	250,-36695
chr9:97358823-97360267	chr9	+	97359674	97360280	True	NM_003837,NM_001193331	chr9,chr9	-,+	FBP2,C9orf3	-3599,128670
chr2:176867123-176867518	chr2	+	176867158	176867500	True	NM_030650,NM_000523	chr2,chr2	-,+	KIAA1715,HOXD13	-140,90031
chr2:220196451-220196838	chr2	+	220196510	220196878	True	NM_001007089,NM_006736	chr2,chr2	-,+	RESP18,DNAJB2	1071,-52521
chr13:103498653-103498877	chr13	+	103498680	103498878	True	NM_000123,NM_024089	chr13,chr13	+,-	ERCC5,KDELC1	-540,-47276
chr1:45966390-45966595	chr1	+	45966573	45966639	True	NM_007170,NR_033297,NR_033296,NR_033298,NM_015506	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	TESK2,CCDC163P,CCDC163P,CCDC163P,MMACHC	-9733,-822,-822,-822,-768
chr2:215945434-215946889	chr2	+	215945476	215946727	True	NM_004044,NM_015657	chr2,chr2	+,-	ATIC,ABCA12	229951,-48666
chr4:39365254-39365623	chr4	+	39365605	39365665	True	NM_002913,NM_001204747,NM_175737	chr4,chr4,chr4	-,-,+	RFC1,RFC1,KLB	2386,2386,42807
chr3:118958761-118959232	chr3	+	118958760	118959206	True	NM_212543,NM_003778,NM_020754	chr3,chr3,chr3	-,-,+	B4GALT4,B4GALT4,ARHGAP31	596,596,54013
chr17:80660959-80661412	chr17	+	80660978	80661254	True	NM_006822,NM_024619	chr17,chr17	-,+	RAB40B,FN3KRP	-4380,13327
chr16:58060783-58061038	chr16	+	58060837	58061047	True	NM_020807,NM_002428	chr16,chr16	-,+	ZNF319,MMP15	-27075,-1606
chr4:85507806-85509638	chr4	+	85507847	85509611	True	NM_001263,NM_006168	chr4,chr4	+,-	CDS1,NKX6-1	-3848,-88460
chrX:153778237-153779092	chrX	+	153778272	153778748	True	NM_003639,NM_001099856,NM_001099857,NM_001042351,NM_000402,NM_001145255	chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,-,-,+	IKBKG,IKBKG,IKBKG,G6PD,G6PD,IKBKG	-2273,-7876,-2773,-2485,-3039,-2773
chr7:27188656-27188994	chr7	+	27188740	27189010	True	NR_002795,NM_024014,NM_006896,NM_019102	chr7,chr7,chr7,chr7	+,-,-,-	HOXA11-AS1,HOXA6,HOXA7,HOXA5	36016,-1372,7336,-5453
chr1:38412709-38413036	chr1	+	38412746	38413058	True	NM_005540,NM_016037	chr1,chr1	-,+	INPP5B,UTP11L	-17,65325
chr20:9819101-9819305	chr20	+	9819105	9819347	True	NM_177990,NM_022096,NM_020341	chr20,chr20,chr20	-,+,-	PAK7,ANKRD5,PAK7	390,196349,390
chr12:122106987-122107215	chr12	+	122107001	122107263	True	NM_173855,NM_032790	chr12,chr12	-,+	MORN3,ORAI1	347,-42597
chr14:24641942-24642154	chr14	+	24641943	24642103	True	NM_001048205,NM_024658,NM_005132	chr14,chr14,chr14	+,-,+	REC8,IPO4,REC8	-760,16071,-760
chr7:44144410-44144713	chr7	+	44144483	44144713	True	NM_001129,NM_001127218	chr7,chr7	+,-	AEBP1,POLD2	-574,18484
chr1:28557282-28557942	chr1	+	28557306	28557955	True	NM_178191,NM_016311,NM_014280,NM_178190	chr1,chr1,chr1,chr1	+,+,-,+	ATPIF1,ATPIF1,DNAJC8,ATPIF1	4646,4646,1644,4646
chr17:38074751-38075312	chr17	+	38074784	38075010	True	NM_139280,NM_001042471,NM_018530,NM_001165959,NM_001165958,NM_001195545	chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,+	ORMDL3,GSDMB,GSDMB,GSDMB,GSDMB,LOC100505591	8924,19,-991,19,19,22716
chr2:191971236-191972736	chr2	+	191971517	191972515	True	NM_001130158,NM_003151	chr2,chr2	+,-	MYO1B,STAT4	137591,43460
chr1:15249210-15250187	chr1	+	15249458	15250222	True	NM_001018000,NM_001018001,NR_027136	chr1,chr1,chr1	+,+,-	KAZN,KAZN,C1orf126	402,6073,228788
chr4:75479345-75480392	chr4	+	75479674	75480408	True	NM_001657,NM_001729	chr4,chr4	+,-	AREG,BTC	220,239524
chr4:75479345-75480392	chr4	+	75309900	75310632	False	NM_001657,NM_002089	chr4,chr4	+,-	AREG,CXCL2	220,-344903
chr1:117910210-117911043	chr1	+	117910356	117911047	True	NM_006699,NM_024626	chr1,chr1	+,-	MAN1A2,VTCN1	-322,-156807
chr6:170163166-170163472	chr6	+	170163247	170163489	True	NM_018341,NM_174910	chr6,chr6	+,-	C6orf70,TCTE3	-11590,-11609
chr14:105993967-105994352	chr14	+	105994023	105994341	True	NM_025268,NM_001519	chr14,chr14	+,-	TMEM121,BRF1	-1121,-226694
chr5:154135019-154135221	chr5	+	154135114	154135268	True	NM_015315,NM_032385	chr5,chr5	+,-	LARP1,C5orf4	-42703,94995
chr12:67463633-67464214	chr12	+	67463738	67464246	True	NM_021150,NM_018448	chr12,chr12	-,+	GRIP1,CAND1	-390813,198814
chr1:1355956-1357045	chr1	+	1356177	1356911	True	NR_026871,NM_001146685,NM_001145210	chr1,chr1,chr1	-,+,-	LOC441869,TMEM88B,LOC441869	23,4596,23
chr22:36111855-36112410	chr22	+	36111870	36112256	True	NM_030642,NM_203377	chr22,chr22	+,-	APOL5,MB	1662,-92469
chr6:33284495-33284750	chr6_qbl_hap6	+	4516751	4516853	False	NM_001145338,NM_001350,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	1163,6239,6239,-27147,956,-2341,-2341,-2341,6239
chr6:33284495-33284750	chr6_mcf_hap5	+	4758247	4758349	False	NM_001145338,NM_001350,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	1163,6236,6236,-27142,956,-2341,-2341,-2341,6236
chr6:33284495-33284750	chr6_cox_hap2	+	4728317	4728419	False	NM_001145338,NM_001350,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	1165,6242,6242,-27142,958,-2341,-2341,-2341,6242
chr6:33284495-33284750	chr6	+	33284505	33284607	True	NM_001145338,NM_001350,NR_024517,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	1162,6236,6236,6236,-27144,955,-2341,-2341,-2341,6236
chr6:33284495-33284750	chr6_dbb_hap3	+	4565828	4565930	False	NM_001145338,NM_001350,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	1163,6240,6240,-27141,956,-2341,-2341,-2341,6240
chr5:150158922-150159535	chr5	+	150159050	150159573	True	NM_032947,NM_016221	chr5,chr5	+,-	C5orf62,DCTN4	-1600,-20393
chr2:97933265-97933465	chr2	+	97933280	97933514	True	NM_199336,NM_001164315	chr2,chr2	-,+	FAHD2B,ANKRD36	-172698,-154098
chr2:97933265-97933465	chr2	-	98105763	98105997	False	NM_025190,NM_001862	chr2,chr2	-,+	ANKRD36B,COX5B	100481,156523
chr17:73841360-73841736	chr17	+	73841365	73841747	True	NM_012478,NM_199242,NM_001080419	chr17,chr17,chr17	-,-,+	WBP2,UNC13D,UNK	9804,-567,-60735
chr1:173793955-173794317	chr1	+	173794057	173794359	True	NM_033319,NM_001171182,NM_001127181,NM_018122	chr1,chr1,chr1,chr1	-,-,-,+	CENPL,CENPL,CENPL,DARS2	-280,-787,-280,-311
chr1:154936799-154937671	chr1	+	154937251	154937485	True	NM_001202859,NM_001826,NR_024163,NM_020524,NM_138300,NM_001130041,NM_001130040,NM_183001,NM_003029	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,-,-,-,-,-,-	SHC1,CKS1B,CKS1B,PBXIP1,PYGO2,SHC1,SHC1,SHC1,SHC1	9524,9632,9632,-8684,-2993,9524,5788,5788,9524
chr16:1877617-1877821	chr16	+	1877756	1877870	True	NM_001142398,NM_005326,NM_031208,NM_001040427,NM_001018104	chr16,chr16,chr16,chr16,chr16	+,-,+,-,+	FAHD1,HAGH,FAHD1,HAGH,FAHD1	-589,-561,-589,-561,-589
chr9:35672977-35673998	chr9	+	35673059	35673935	True	NM_032818,NM_001216	chr9,chr9	-,+	C9orf100,CA9	-7781,-21
chr10:119001481-119002334	chr10	+	119001492	119002170	True	NR_037436,NM_003054	chr10,chr10	-,+	MIR3663,SLC18A2	-74207,-959
chr1:154838080-154839907	chr1	+	154838097	154839858	True	NM_001826,NM_001204087,NM_002249,NM_170782	chr1,chr1,chr1,chr1	+,-,-,-	CKS1B,KCNN3,KCNN3,KCNN3	107259,2946,2946,-5759
chr9:126771245-126771466	chr9	+	126771311	126771423	True	NM_004789,NM_024820	chr9,chr9	+,-	LHX2,DENND1A	2465,-78894
chr6:139352663-139353188	chr6	+	139352662	139353000	True	NM_031922,NM_021243	chr6,chr6	-,+	REPS1,C6orf115	-43264,-2901
chr10:43571537-43571795	chr10	+	43571704	43571836	True	NM_020975,NM_020630,NM_145313	chr10,chr10,chr10	+,+,-	RET,RET,RASGEF1A	680,680,190581
chr1:64687089-64688560	chr1	+	64687292	64688511	True	NM_152489,NM_014288	chr1,chr1	+,-	UBE2U,ITGB3BP	-17855,-698457
chr9:97091096-97093054	chr9	+	97091193	97092753	True	NM_017561,NR_033937	chr9,chr9	-,+	FAM22F,LOC100132077	-267,2004
chr9:97091096-97093054	chr9	-	99690680	99691018	False	NM_001170741,NM_001045477,NM_001001662	chr9,chr9,chr9	+,+,-	FAM22G,FAM22G,ZNF782	267,267,-74291
chr6:116693066-116693351	chr6	+	116693078	116693272	True	NM_003309,NM_013352	chr6,chr6	-,+	TSPYL1,DSE	-91798,-1019
chr1:226948141-226948623	chr1	+	226948202	226948520	True	NM_002221,NM_000447	chr1,chr1	-,+	ITPKB,PSEN2	-21326,109752
chr20:20028530-20029021	chr20	+	20028549	20029053	True	NM_001167816,NM_015585,NM_016652	chr20,chr20,chr20	+,+,-	C20orf26,C20orf26,CRNKL1	8236,4104,7687
chr17:74300591-74302457	chr17	+	74300642	74302368	True	NM_032134,NM_182565	chr17,chr17	-,+	QRICH2,FAM100B	1443,-39407
chr7:150438767-150439302	chr7	+	150438780	150439332	True	NM_001162367,NM_001101311,NM_018384	chr7,chr7,chr7	+,-,+	LOC100128542,TMEM176B,GIMAP5	7491,58339,-4395
chr3:151178937-151179779	chr3	+	151178948	151179823	True	NR_031678,NM_178822	chr3,chr3	+,-	MIR548H2,IGSF10	167496,-2451
chr19:40007494-40008486	chr19	+	40007802	40008142	True	NM_152361,NM_182704	chr19,chr19	-,+	EID2B,SELV	15402,-2100
chr4:159931907-159932760	chr4	+	159931921	159932553	True	NM_152543,NM_020840	chr4,chr4	-,+	C4orf45,FNIP2	23842,-241790
chr5:137055911-137057671	chr5	+	137056122	137057700	True	NM_017415,NR_002713	chr5,chr5	-,+	KLHL3,NPY6R	14129,79181
chr7:148786337-148786896	chr7	+	148786369	148786751	True	NM_152411,NM_020781	chr7,chr7	-,+	ZNF786,ZNF398	1174,36756
chr10:125650351-125650706	chr10	+	125650399	125650685	True	NM_198148,NM_153442	chr10,chr10	-,+	CPXM2,GPR26	865,-224579
chr17:79197234-79197439	chr17	+	79197289	79197375	True	NM_001009811,NM_014984,NM_001086521	chr17,chr17,chr17	-,-,+	AZI1,AZI1,C17orf89	-538,-538,15735
chr19:18141460-18143168	chr19	+	18141680	18143212	True	NM_015683,NM_005535	chr19,chr19	+,-	ARRDC2,IL12RB1	-22754,54535
chr13:51622630-51623576	chr13	+	51622672	51623598	True	NR_003923,NM_001142279	chr13,chr13	-,+	GUCY1B2,RNASEH2B	16745,-138911
chr20:62131329-62131644	chr20	+	62131355	62131641	True	NM_024299,NM_001958	chr20,chr20	+,-	PPDPF,EEF1A2	20491,-850
chr7:47693137-47693648	chr7	+	47693208	47693658	True	NM_022748,NM_001123065	chr7,chr7	-,+	TNS3,C7orf65	-71466,1183
chr8:75268751-75269108	chr8	+	75268789	75268880	True	NM_018972,NM_001040875,NM_020647	chr8,chr8,chr8	+,+,-	GDAP1,GDAP1,JPH1	-6237,-6202,-35227
chr4:88899827-88900475	chr4	+	88899867	88900289	True	NM_001040058,NM_001040060,NM_000582,NM_004827	chr4,chr4,chr4,chr4	+,+,+,-	SPP1,SPP1,SPP1,ABCG2	-3116,-3116,-3116,179786
chr17:61779437-61779847	chr17	+	61779551	61779879	True	NM_007372,NM_030576	chr17,chr17	+,-	DDX42,LIMD2	71687,-2032
chr1:1552275-1552868	chr1	+	1552291	1552907	True	NM_001170687,NM_080875,NM_001170689,NM_001170688,NM_001170686,NR_033183,NM_014188	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,+,-	MIB2,MIB2,MIB2,MIB2,MIB2,MIB2,SSU72	-1547,-1547,-1097,-1547,-1547,-1547,-42029
chr17:7472557-7472921	chr17	+	7472761	7472970	True	NM_001416,NR_002918,NR_037926,NR_002912,NR_002604,NM_001251,NM_015670,NM_001204510,NM_006942,NM_001040059	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,+,+,+,-,+	EIF4A1,SNORA48,SENP3-EIF4A1,SNORA67,SNORD10,CD68,SENP3,EIF4A1,SOX15,CD68	3053,5060,-7503,8302,7158,9834,-7503,3053,20568,9835
chr3:101305488-101305948	chr3	+	101305678	101305824	True	NM_020654,NM_020357	chr3,chr3	-,+	SENP7,PCNP	-73593,-12694
chr3:130302760-130303617	chr3	+	130302759	130303361	True	NM_001102608,NM_014602	chr3,chr3	+,-	COL6A6,PIK3R4	-23633,162391
chr3:48264751-48266311	chr3	+	48264777	48266351	True	NM_004345,NM_201567	chr3,chr3	+,-	CAMP,CDC25A	34,-34976
chr6:15069667-15071569	chr6	+	15069999	15071605	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	174921,591734
chr17:71822016-71822865	chr17	+	71822140	71822902	True	NM_000999,NR_027146	chr17,chr17	+,-	RPL38,C17orf54	376892,1824
chr3:8546383-8547543	chr3	+	8546431	8547567	True	NM_014583,NR_033378	chr3,chr3	+,-	LMCD1,LOC100288428	-2971,-3087
chr19:7551576-7552467	chr19	+	7552003	7552315	True	NM_080662,NM_198534	chr19,chr19	-,+	PEX11G,C19orf45	1640,10129
chrX:150064354-150064725	chrX	+	150064514	150064581	True	NM_031462,NM_001184808,NM_134446,NM_134445,NM_005342	chrX,chrX,chrX,chrX,chrX	-,-,-,-,+	CD99L2,CD99L2,CD99L2,CD99L2,HMGB3	2761,2761,2761,2761,87181
chr14:60262138-60262345	chr14	+	60262291	60262385	True	NM_022495,NM_206857	chr14,chr14	+,-	C14orf135,RTN1	296243,-67860
chr3:32543593-32543921	chr3	+	32543611	32543847	True	NM_017801,NM_181472	chr3,chr3	-,+	CMTM6,CMTM7	606,-110499
chr1:184006622-184007538	chr1	+	184006785	184007404	True	NM_015101,NM_001127394	chr1,chr1	-,+	GLT25D2,TSEN15	78,13406
chr19:7768114-7768389	chr19	+	7768232	7768342	True	NM_001042461,NM_002002	chr19,chr19	+,-	TRAPPC5,FCER2	-22519,-1200
chr17:1926208-1926490	chr17	+	1926284	1926454	True	NM_178568,NM_001383	chr17,chr17	-,+	RTN4RL1,DPH1	1774,6976
chr1:4043111-4044145	chr1	+	4043141	4043857	True	NR_024455,NM_207356	chr1,chr1	+,-	LOC100133612,C1orf174	-226224,-226284
chr2:68592711-68593244	chr2	+	68592716	68593180	True	NM_015463,NM_002664	chr2,chr2	-,+	CNRIP1,PLEK	-45533,-445
chr1:236686993-236687228	chr1	+	236687000	236687276	True	NM_201545,NM_201544,NM_201543,NR_034040,NM_006499	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	LGALS8,LGALS8,LGALS8,LOC100287902,LGALS8	-5537,-24,-312,582,-312
chr8:19540046-19540310	chr8	+	19540057	19540345	True	NR_024040,NM_018371,NM_018142	chr8,chr8,chr8	-,-,+	CSGALNACT1,CSGALNACT1,INTS10	10,1,134572
chr19:8928934-8930539	chr19	+	8929249	8930346	True	NM_145208,NM_144693	chr19,chr19	+,-	MBD3L1,ZNF558	22922,3269
chr19:43436266-43437132	chr19	+	43436535	43436850	True	NM_002783,NR_036584	chr19,chr19	-,+	PSG7,LOC100289650	4531,-110571
chr2:25895052-25895716	chr2	+	25895214	25895744	True	NM_183360,NM_183361,NM_033147,NM_016131,NM_021907,NM_033148	chr2,chr2,chr2,chr2,chr2,chr2	-,-,-,+,-,-	DTNB,DTNB,DTNB,RAB10,DTNB,DTNB	809,809,809,360984,809,809
chr13:52172302-52172835	chr13	+	52172545	52172885	True	NM_052950,NM_001039938	chr13,chr13	+,-	WDFY2,INTS6	-14112,-145270
chr16:84681312-84681742	chr16	+	84681369	84681599	True	NM_021149,NM_024731	chr16,chr16	-,+	COTL1,KLHL36	-29700,531
chr11:67252034-67253122	chr11	+	67252037	67252951	True	NM_003977,NM_025124	chr11,chr11	+,-	AIP,TMEM134	-1590,-15306
chr16:32938609-32939183	chr16	+	32938612	32939194	True	NR_003083,NM_016212	chr16,chr16	-,+	SLC6A10P,TP53TG3	-42149,265785
chr16:32938609-32939183	chr16	+	31995060	31995642	False	NR_002827,NM_003414	chr16,chr16	-,+	HERC2P4,ZNF267	168282,-110032
chr16:32938609-32939183	chr16	-	33728421	33729003	False	NR_033866,NM_001205265	chr16,chr16	-,+	LOC390705,TP53TG3B	-429719,-466352
chr17:20800345-20800836	chr17	+	20800479	20800847	True	NM_001004306,NM_015510	chr17,chr17	-,+	CCDC144NL,DHRS7B	-1026,229410
chr14:58880692-58881310	chr14	+	58880791	58881143	True	NM_012460,NM_014749	chr14,chr14	-,+	TIMM9,KIAA0586	13145,13566
chr17:29151837-29152063	chr17	+	29151876	29152040	True	NM_015986,NM_024857	chr17,chr17	-,+	CRLF3,ATAD5	-98,6982
chr22:51177582-51177964	chr22	+	51177629	51177947	True	NM_001003789,NM_001097	chr22,chr22	-,+	RABL2B,ACR	44190,-1028
chr11:47616677-47618299	chr11	+	47616683	47617715	True	NM_001164379,NM_031909	chr11,chr11	+,-	FAM180B,C1QTNF4	-8504,-722
chr3:3841990-3842536	chr3	+	3842144	3842570	True	NM_016302,NM_020873	chr3,chr3	-,+	CRBN,LRRN1	-620743,-1074
chr13:36775108-36775762	chr13	+	36775217	36775415	True	NM_017826,NM_001111046	chr13,chr13	-,+	SOHLH2,CCNA1	13397,230551
chrX:77167072-77168897	chrX	+	77167468	77168812	True	NM_000052,NM_032121	chrX,chrX	+,-	ATP7A,MAGT1	-1338,-16403
chr10:104593125-104593372	chr10	+	104593130	104593212	True	NM_000102,NM_001136200	chr10,chr10	-,+	CYP17A1,C10orf32	4128,20754
chr11:124763783-124765358	chr11	+	124763823	124765211	True	NM_019055,NM_001037558	chr11,chr11	-,+	ROBO4,HEPN1	2670,23934
chr9:95947717-95948309	chr9	+	95947781	95948289	True	NM_004148,NM_006648	chr9,chr9	-,+	NINJ1,WNK2	-51211,-620
chr6:154680599-154680962	chr6	+	154680603	154680741	True	NM_015553,NM_001130700,NM_001145287	chr6,chr6,chr6	-,-,+	IPCEF1,IPCEF1,OPRM1	-2703,-2703,-273013
chr1:114301103-114301525	chr1	+	114301266	114301556	True	NR_037864,NM_006608	chr1,chr1	+,-	LOC100287722,PHTF1	97700,271
chr19:1752382-1752856	chr19	+	1752432	1752836	True	NM_001178002,NM_001080488	chr19,chr19	-,+	ATP8B3,ONECUT3	59413,825
chr19:39419168-39420050	chr19	+	39419216	39419908	True	NM_017827,NM_001145901,NM_021107,NM_033362,NM_033363	chr19,chr19,chr19,chr19,chr19	-,-,+,+,+	SARS2,SARS2,MRPS12,MRPS12,MRPS12	1678,1678,1685,1439,1685
chr2:220436160-220436484	chr2	+	220436362	220436478	True	NM_001173431,NM_015311,NM_002191,NM_001173408	chr2,chr2,chr2,chr2	-,-,+,-	OBSL1,OBSL1,INHA,OBSL1	-94,-94,475,-94
chr12:125020781-125022505	chr12	+	125020939	125022247	True	NM_001077261,NM_181709	chr12,chr12	-,+	NCOR2,FAM101A	29813,-247288
chr19:18946310-18946786	chr19	+	18946589	18946767	True	NM_000095,NM_002911	chr19,chr19	-,+	COMP,UPF1	-44475,-3896
chr3:64672406-64673166	chr3	+	64672527	64673066	True	NM_182920,NR_030317	chr3,chr3	-,+	ADAMTS9,MIR548A2	349,32616
chr7:50353999-50354660	chr7	+	50353999	50354260	True	NM_001042762,NM_006060	chr7,chr7	-,+	FIGNL1,IKZF1	163879,-9679
chr1:16175360-16175994	chr1	+	16175427	16175866	True	NR_024279,NM_015001	chr1,chr1	-,+	FLJ37453,SPEN	-785,-1123
chrX:151921407-151921873	chrX	+	151921454	151921872	True	NM_001129826,NM_004909,NM_005361,NM_175742,NM_001129828,NM_175743,NM_153488,NM_001080848	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,-,-,+,-,-,+	CSAG3,CSAG2,MAGEA2,MAGEA2,CSAG3,MAGEA2,MAGEA2B,CSAG2	5938,5861,542,542,5861,542,-1355,5861
chrX:151921407-151921873	chrX	-	151883610	151884028	False	NM_001129826,NM_004909,NM_005361,NM_175742,NM_001129828,NM_175743,NM_153488,NM_001080848	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,+,+,-,+,+,-	CSAG3,CSAG2,MAGEA2,MAGEA2,CSAG3,MAGEA2,MAGEA2B,CSAG2	-5940,-5863,-542,-542,-5863,-542,1355,-5863
chr1:27481080-27481344	chr1	+	27481166	27481380	True	NM_015023,NM_003047	chr1,chr1	+,-	WDTC1,SLC9A1	79626,121
chr5:173127499-173127883	chr5	+	173127504	173127598	True	NR_027109,NM_138369	chr5,chr5	+,-	LOC285593,BOD1	-120898,-83838
chr22:24346014-24346917	chr22	+	24346036	24346564	True	NR_003081,NM_000854	chr22,chr22	-,+	GSTTP1,GSTT2	744,-23773
chr22:24346014-24346917	chr22	+	24400589	24400928	False	NR_003082,NM_012295,NM_001201429,NM_001199281	chr22,chr22,chr22,chr22	-,+,+,+	GSTTP2,CABIN1,CABIN1,CABIN1	1022,6836,6836,6891
chr10:74386743-74387028	chr10	+	74386743	74386846	True	NM_138357,NM_006077,NM_001195518	chr10,chr10,chr10	+,-,-	CCDC109A,CBARA1,CBARA1	65042,-794,-794
chr2:219907466-219909229	chr2	+	219907481	219909046	True	NM_194302,NM_152389,NR_024385	chr2,chr2,chr2	-,-,+	CCDC108,CCDC108,LOC151300	-1236,-1236,-66526
chr19:47162883-47163328	chr19	+	47162963	47163297	True	NM_005184,NM_145056	chr19,chr19	+,-	CALM3,DACT3	-58502,1148
chr3:13922552-13924459	chr3	+	13922755	13924446	True	NM_004625,NR_036481	chr3,chr3	-,+	WNT7A,LOC100132526	-1137,50106
chr16:31713355-31713654	chr16	+	31713369	31713429	True	NR_027011,NR_024034	chr16,chr16	-,+	CSDAP1,KIAA0664L3	-132524,-1486
chr19:33166480-33166714	chr19	+	33166485	33166627	True	NM_207391,NM_032139	chr19,chr19	+,-	RGS9BP,ANKRD27	-223,-383
chr1:237206516-237206719	chr1	+	237206541	237206765	True	NM_001035,NM_018072	chr1,chr1	+,-	RYR2,HEATR1	-890,-438700
chr7:73133000-73133273	chr7	+	73133085	73133270	True	NM_004603,NR_036247,NM_001165903	chr7,chr7,chr7	-,+,-	STX1A,MIR4284,STX1A	797,-7489,797
chr15:82337650-82338073	chr15	+	82337815	82337907	True	NM_032246,NM_001008226	chr15,chr15	-,+	MEX3B,FAM154B	504,217244
chr1:26505096-26505671	chr1	+	26505168	26505571	True	NM_015871,NM_032588,NM_006314,NR_023345	chr1,chr1,chr1,chr1	+,-,+,+	ZNF593,TRIM63,CNKSR1,CNKSR1	-8831,-111047,-1238,-1237
chr8:71616339-71616761	chr8	+	71616588	71616778	True	NM_016027,NM_001011720	chr8,chr8	-,+	LACTB2,XKR9	-35141,-35048
chr7:74186586-74187196	chr7	+	74186863	74187237	True	NM_173537,NM_000265	chr7,chr7	-,+	GTF2IRD2,NCF1	80654,1071
chr7:74186586-74187196	chr7	+	72633162	72633536	False	NR_002164,NR_003186	chr7,chr7	-,+	GTF2IRD2P1,NCF1B	52172,1137
chr7:74186586-74187196	chr7	-	74588893	74589267	False	NM_001003795,NR_003187	chr7,chr7	+,-	GTF2IRD2B,NCF1C	-80597,-1077
chr7:100026288-100026851	chr7	+	100026370	100026900	True	NM_001194992,NM_001194991,NM_001194990,NM_019606,NM_017984,NM_145030	chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,-,-	MEPCE,MEPCE,MEPCE,MEPCE,ZCWPW1,C7orf47	-8,-8,-8,353,-68,7244
chr3:48132067-48132975	chr3	+	48132581	48133023	True	NM_004345,NM_001134364,NM_002375,NM_030885	chr3,chr3,chr3,chr3	+,-,-,-	CAMP,MAP4,MAP4,MAP4	131838,-1812,-1812,-1812
chr15:80710737-80712091	chr15	+	80711120	80712077	True	NM_014862,NR_033833	chr15,chr15	+,-	ARNT2,LOC283688	-14486,-76973
chr4:175850229-175851170	chr4	+	175850228	175850612	True	NM_014269,NM_006529	chr4,chr4	+,-	ADAM29,GLRA3	-10781,-99763
chr6:79575580-79577193	chr6	+	79576113	79577173	True	NM_001010844,NM_017934	chr6,chr6	+,-	IRAK1BP1,PHIP	15,210888
chr3:170135977-170136471	chr3	+	170135978	170136438	True	NM_005602,NM_020949,NM_001185056	chr3,chr3,chr3	+,-,+	CLDN11,SLC7A14,CLDN11	214,167475,2589
chr10:135122792-135123019	chr10	+	135122915	135123019	True	NM_006659,NM_145806	chr10,chr10	-,+	TUBGCP2,ZNF511	-271,-543
chr4:165953246-165953491	chr4	+	165953248	165953330	True	NM_001012414,NM_152620	chr4,chr4	-,+	TRIM61,TRIM60	-54430,-148
chr13:77901381-77903273	chr13	+	77901959	77903320	True	NM_015057,NM_001160706	chr13,chr13	-,+	MYCBP2,SCEL	-782,206488
chr5:171703928-171704498	chr5	+	171704165	171704447	True	NM_001171183,NM_152277	chr5,chr5	+,-	EFCAB9,UBTD2	-83046,6406
chr12:96796338-96796862	chr12	+	96796575	96796635	True	NM_001170464,NM_002595,NM_005230	chr12,chr12,chr12	-,-,+	CDK17,CDK17,ELK3	-2209,-2209,-208419
chr11:66445697-66446314	chr11	+	66445799	66446175	True	NM_001198844,NM_031492	chr11,chr11	+,-	RBM4,RBM4B	-39765,-524
chr16:2272238-2272945	chr16	+	2272285	2272603	True	NM_004424,NM_001042371	chr16,chr16	+,-	E4F1,PGP	963,-7463
chr14:102417367-102417636	chr14	+	102417434	102417612	True	NM_001376,NM_005348	chr14,chr14	+,-	DYNC1H1,HSP90AA1	13252,135950
chr17:40950280-40950517	chr17	+	40950340	40950566	True	NM_173478,NM_001040431	chr17,chr17	+,-	CNTD1,CCDC56	287,188
chr11:61349371-61350029	chr11	+	61349375	61350049	True	NM_004200,NR_002775	chr11,chr11	-,+	SYT7,RPLP0P2	-1077,32458
chrX:151920134-151921364	chrX	+	151920512	151921308	True	NM_001129826,NM_004909,NM_005361,NM_175742,NM_001129828,NM_175743,NM_153488,NM_001080848	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,-,-,+,-,-,+	CSAG3,CSAG2,MAGEA2,MAGEA2,CSAG3,MAGEA2,MAGEA2B,CSAG2	6502,6425,1106,1106,6425,1106,-413,6425
chrX:151920134-151921364	chrX	-	151884174	151884970	False	NM_001129826,NM_004909,NM_005361,NM_175742,NM_001129828,NM_175743,NM_153488,NM_001080848	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,+,+,-,+,+,-	CSAG3,CSAG2,MAGEA2,MAGEA2,CSAG3,MAGEA2,MAGEA2B,CSAG2	-6504,-6427,-1106,-1106,-6427,-1106,413,-6427
chr3:127770715-127771075	chr3	+	127770788	127770916	True	NM_013336,NM_003707	chr3,chr3	+,-	SEC61A1,RUVBL1	295,71805
chr19:57790442-57791201	chr19	+	57790658	57791173	True	NM_001012729,NM_006635	chr19,chr19	-,+	DUXA,ZNF460	-111802,679
chr12:132999047-133000152	chr12	+	132999106	133000030	True	NM_001142641,NM_001122636	chr12,chr12	+,-	FBRSL1,GALNT9	67126,-93201
chr4:24586544-24587561	chr4	+	24586564	24587445	True	NM_001358,NM_003102	chr4,chr4	-,+	DHX15,SOD3	-380,209639
chr14:24600809-24601063	chr14	+	24600961	24601053	True	NM_016049,NM_203402,NM_006263,NM_176783	chr14,chr14,chr14,chr14	-,+,+,+	FAM158A,FITM1,PSME1,PSME1	9794,-337,4324,4324
chr7:97879697-97880254	chr7	+	97879984	97880288	True	NM_015395,NM_015379	chr7,chr7	-,+	TECPR1,BRI3	1230,30690
chr14:77100303-77101996	chr14	+	77100469	77101814	True	NM_015305,NM_014909	chr14,chr14	-,+	ANGEL1,VASH1	177519,126420
chr14:91881578-91881785	chr14	+	91881579	91881800	True	NM_001080414,NR_003709	chr14,chr14	-,+	CCDC88C,SNORA11B	2391,-288868
chr19:42581414-42582912	chr19	+	42581511	42582838	True	NM_022752,NM_002088	chr19,chr19	+,-	ZNF574,GRIK5	-1272,-11554
chr10:43901997-43902251	chr10	+	43902042	43902300	True	NM_004966,NM_001098208,NR_026693,NM_001098204,NM_001098205,NM_001098206,NM_001098207	chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,-,+,-,-,-,-	HNRNPF,HNRNPF,ZNF487P,HNRNPF,HNRNPF,HNRNPF,HNRNPF	2406,-9763,30273,2446,2082,1049,-9248
chr6:14886240-14886521	chr6	+	14886315	14886559	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	359967,776780
chr1:244998626-244998837	chr1	+	244998706	244998828	True	NR_026778,NM_198076	chr1,chr1	-,+	NCRNA00201,FAM36A	11465,-118
chr1:54358444-54359130	chr1	+	54358632	54359126	True	NM_000792,NM_213593,NR_036640,NM_018982,NR_036639,NM_001039716,NM_001039715	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,-,-,+,+	DIO1,DIO1,YIPF1,YIPF1,YIPF1,DIO1,DIO1	734,734,-3145,-3145,-3145,734,734
chr12:11184136-11185888	chr12	+	11184430	11185629	True	NM_176888,NM_001110213,NM_176885	chr12,chr12,chr12	-,+,-	TAS2R19,PRH2,TAS2R31	-9260,-102659,-424
chr15:53083890-53084113	chr15	+	53083896	53084145	True	NM_004498,NM_002748	chr15,chr15	-,+	ONECUT1,MAPK6	-1687,-772536
chr11:65492203-65492938	chr11	+	65492481	65492747	True	NM_182710,NM_032193	chr11,chr11	+,-	KAT5,RNASEH2C	-13052,-4072
chr20:61273376-61273600	chr20	+	61273446	61273636	True	NM_016354,NR_024470	chr20,chr20	+,-	SLCO4A1,LOC100127888	160,24387
chr7:150925059-150925609	chr7	+	150925058	150925526	True	NM_007189,NM_019015,NR_030407,NM_005692	chr7,chr7,chr7,chr7	-,+,+,-	ABCF2,CHPF2,MIR671,ABCF2	-741,4058,9980,-741
chr10:120822350-120823317	chr10	+	120822559	120823308	True	NR_002917,NM_199461	chr10,chr10	-,+	SNORA19,NANOS1	-2909,-33382
chr19:51869469-51869744	chr19	+	51869514	51869784	True	NM_001985,NM_152353,NR_033235,NM_005601	chr19,chr19,chr19,chr19	-,-,+,-	ETFB,CLDND2,LOC100129083,NKG7	-62,2523,49375,6226
chr9:4486991-4487778	chr9	+	4487181	4487692	True	NM_001039395,NM_004170	chr9,chr9	-,+	C9orf68,SLC1A1	179043,2734
chr15:28821956-28822622	chr15	+	28821962	28822513	True	NR_036443,NR_033351	chr15,chr15	+,-	HERC2P9,GOLGA8F	77074,-43819
chr15:28821956-28822622	chr15	-	28579406	28579957	False	NM_004667,NR_033351	chr15,chr15	-,+	HERC2,GOLGA8F	-12111,43826
chr15:28821956-28822622	chr15	-	20723524	20724076	False	NR_036432,NR_027411	chr15,chr15	-,+	HERC2P3,GOLGA8C	-12091,43597
chr15:28821956-28822622	chr15	-	23390414	23390869	False	NR_036470,NR_002824	chr15,chr15	+,-	HERC2P7,HERC2P2	-26,-12155
chr15:28821956-28822622	chr15	-	23678017	23678568	False	NM_005664,NM_019066	chr15,chr15	+,-	MKRN3,MAGEL2	131885,214475
chr5:1444331-1444695	chr5	+	1444421	1444717	True	NM_182632,NM_001044	chr5,chr5	+,-	SLC6A18,SLC6A3	-219002,876
chr1:92951421-92951776	chr1	+	92951564	92951755	True	NM_001127216,NM_001127215,NM_024813,NM_005263	chr1,chr1,chr1,chr1	-,-,+,-	GFI1,GFI1,RPAP2,GFI1	22,-2208,-187093,728
chrX:69661563-69663161	chrX	+	69661703	69662935	True	NM_020730,NM_016484,NM_021120	chrX,chrX,chrX	+,-,+	DLG3,PDZD11,DLG3	9219,-151905,1769
chr5:148722397-148724024	chr5	+	148722574	148723955	True	NM_152407,NM_014443	chr5,chr5	+,-	GRPEL2,IL17B	1021,34938
chr3:50603199-50604576	chr3	+	50603382	50604606	True	NM_016173,NM_001171743,NM_016210,NM_001171741,NM_001171740	chr3,chr3,chr3,chr3,chr3	+,-,-,-,-	HEMK1,C3orf18,C3orf18,C3orf18,C3orf18	2302,667,667,3902,667
chr5:10623377-10623858	chr5	+	10623449	10623723	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-59065,137714
chr12:110892316-110892668	chr12	+	110892481	110892541	True	NM_005719,NM_013300	chr12,chr12	-,+	ARPC3,C12orf24	-4323,13690
chr19:57185561-57187031	chr19	+	57185562	57186908	True	NM_001193628,NM_001005850	chr19,chr19	+,-	LOC147670,ZNF835	-31092,-1316
chr20:32844429-32845187	chr20	+	32844516	32845231	True	NM_001672,NM_000687	chr20,chr20	+,-	ASIP,AHCY	2939,46037
chr9:34623786-34624128	chr9	+	34623901	34624043	True	NM_000155,NM_001017363,NM_024348,NM_007234	chr9,chr9,chr9,chr9	+,-,-,-	GALT,ARID3C,DCTN3,DCTN3	22591,4018,-3405,-3405
chr3:180042401-180042656	chr3	+	180042420	180042662	True	NM_001042601,NM_016559	chr3,chr3	+,-	TTC14,PEX5L	277255,-287903
chr19:44329780-44331151	chr19	+	44330260	44331149	True	NM_182573,NM_181845	chr19,chr19	-,+	LYPD5,ZNF283	-5452,323
chr10:22255910-22256134	chr10	+	22256094	22256170	True	NM_012071,NM_022365	chr10,chr10	+,-	COMMD3,DNAJC1	349141,36530
chr1:41621579-41622201	chr1	+	41621746	41621958	True	NM_001172221,NR_037868,NM_001031694,NM_001172222	chr1,chr1,chr1,chr1	-,+,-,-	SCMH1,LOC100507178,SCMH1,SCMH1	6787,-141543,5202,3703
chr3:160119460-160121018	chr3	+	160119598	160120803	True	NR_029525,NM_001002800,NR_029663,NM_020800,NM_005496,NM_001190241	chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,-,+,-	MIR16-2,SMC4,MIR15B,IFT80,SMC4,IFT80	1729,-2226,1572,-2278,-1309,-2278
chrX:108778995-108780086	chrX	+	108778994	108780098	True	NM_018698,NM_001522	chrX,chrX	+,-	NXT2,GUCY2F	-35,-53709
chr17:3796838-3797931	chr17	+	3797319	3797969	True	NM_172207,NM_172206,NM_032294,NM_031965	chr17,chr17,chr17,chr17	-,-,-,+	CAMKK1,CAMKK1,CAMKK1,GSG2	-982,-3282,-982,-170173
chr7:150495656-150496853	chr7	+	150495789	150496763	True	NM_001101312,NM_001101311,NM_018487,NM_014020,NM_001101314	chr7,chr7,chr7,chr7,chr7	-,-,+,-,-	TMEM176B,TMEM176B,TMEM176A,TMEM176B,TMEM176B	908,908,1090,1735,908
chr17:4490584-4490790	chr17	+	4490640	4490794	True	NM_198501,NM_001114974,NM_153338	chr17,chr17,chr17	+,+,-	SMTNL2,SMTNL2,GGT6	-3415,-2857,-26764
chr22:41986114-41986327	chr22	+	41986198	41986332	True	NM_014460,NM_002676	chr22,chr22	+,-	CSDC2,PMM1	-29235,-327
chr20:38896682-38897194	chr20	+	38896790	38897216	True	NM_003286,NM_005461	chr20,chr20	+,-	TOP1,MAFB	760245,420710
chrX:135335179-135335915	chrX	+	135335285	135335859	True	NM_024597,NM_001173516,NM_001173517,NM_153834	chrX,chrX,chrX,chrX	-,-,-,+	MAP7D3,MAP7D3,MAP7D3,GPR112	-1547,2838,-1547,47262
chr5:178284205-178285514	chr5	+	178284870	178285398	True	NR_024035,NM_058230	chr5,chr5	-,+	AACSP1,ZNF354B	-81593,1555
chr10:131759154-131761021	chr10	+	131759190	131761005	True	NM_001005463,NM_006541	chr10,chr10	-,+	EBF3,GLRX3	1141,173633
chr10:120964006-120965047	chr10	+	120964042	120964508	True	NM_005308,NM_014098	chr10,chr10	+,-	GRK5,PRDX3	2688,-25697
chr19:234331-234886	chr19	+	234507	234567	True	NM_001005240,NR_028324	chr19,chr19	+,-	OR4F17,FLJ45445	-123879,-32298
chr19:234331-234886	chr1	+	704958	705018	False	NR_033908,NR_015368	chr1,chr1	-,+	LOC100288069,LOC643837	9100,58045
chr22:25594699-25594916	chr22	+	25594698	25594954	True	NM_004076,NM_182492	chr22,chr22	+,-	CRYBB3,LRP5L	870,163620
chr12:7280969-7281207	chr12	+	7280969	7281199	True	NM_014718,NM_031491	chr12,chr12	+,-	CLSTN3,RBP5	1767,317
chr7:95064472-95064865	chr7	+	95064471	95064725	True	NM_145872,NM_001018161,NM_000305	chr7,chr7,chr7	+,-,-	ASB4,PON2,PON2	50487,-87,-87
chr2:209149278-209149910	chr2	+	209149347	209149746	True	NM_015040,NM_005896	chr2,chr2	+,-	PIKFYVE,IDH1	-18410,-29541
chr2:169659790-169660864	chr2	+	169659790	169660868	True	NM_020675,NM_001171632,NM_001039724,NM_052946	chr2,chr2,chr2,chr2	-,+,+,+	SPC25,NOSTRIN,NOSTRIN,NOSTRIN	86126,-746,-746,-739
chr22:17078576-17079140	chr7	-	152137242	152137412	False	NR_002935,NM_170606	chr7,chr7	+,-	FABP5P3,MLL3	-3321,-4152
chr22:17078576-17079140	chr22	+	17078594	17078823	True	NM_014406,NR_001591	chr22,chr22	-,+	CCT8L2,psiTPTE22	-4894,3977
chr17:58197673-58197876	chr17	+	58197695	58197851	True	NM_000717,NR_027408	chr17,chr17	+,-	CA4,LOC653653	29450,-17415
chr17:58197673-58197876	chr17	-	58103416	58103572	False	NM_000717,NR_002924	chr17,chr17	+,-	CA4,DHX40P1	123729,-7080
chrX:153798539-153798839	chrX	+	153798636	153798768	True	NM_001042351,NR_027401,NR_027402	chrX,chrX,chrX	-,+,+	G6PD,NCRNA00204,NCRNA00204B	-22849,710,710
chrX:153798539-153798839	chrX	-	153862158	153862290	False	NR_027401,NM_139250,NR_027402	chrX,chrX,chrX	-,+,-	NCRNA00204,CTAG1A,NCRNA00204B	-710,-48791,-710
chr14:65405324-65406294	chr14	+	65405349	65406247	True	NM_001202559,NM_002083	chr14,chr14	+,-	CHURC1-FNTB,GPX2	-24321,3334
chr19:55897367-55897817	chr19	+	55897489	55897795	True	NM_139172,NM_001190764,NM_000991,NM_001136135,NM_001136134,NM_001136137,NM_001136136	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+,+	TMEM190,LOC388564,RPL28,RPL28,RPL28,RPL28,RPL28	-9336,-1862,-240,-240,-240,-240,-240
chr11:61100072-61100274	chr11	+	61100072	61100290	True	NM_001923,NM_015533	chr11,chr11	-,+	DDB1,DAK	426,363
chr14:90861567-90862142	chr14	+	90861570	90862162	True	NM_006888,NM_001166106,NM_199043	chr14,chr14,chr14	+,+,-	CALM1,CALM1,C14orf102	1164,2443,-63291
chr6:170195081-170195433	chr6	+	170195201	170195471	True	NR_026781,NR_026780	chr6,chr6	-,+	NCRNA00242,C6orf208	3500,-5090
chr6:108616096-108616667	chr6	+	108616145	108616707	True	NM_145315,NM_152827	chr6,chr6	+,-	LACE1,SNX3	-98,-33681
chr14:74054179-74054997	chr14	+	74054461	74055045	True	NM_152331,NM_203309	chr14,chr14	+,-	ACOT4,HEATR4	3364,-28810
chr3:181351589-181352381	chr3	+	181351651	181352381	True	NR_033725,NR_004053	chr3,chr3	-,+	DNAJC19,SOX2OT	-644089,-23559
chr12:108538766-108539163	chr12	+	108538775	108539157	True	NM_014653,NM_001142345	chr12,chr12	+,-	WSCD2,CMKLR1	-15315,175332
chr6:144164826-144165327	chr6	+	144164882	144165323	True	NM_001080952,NM_032860	chr6,chr6	-,+	PLAGL1,LTV1	164277,-425
chr13:100623757-100624232	chr13	+	100623770	100624144	True	NM_033132,NM_007129	chr13,chr13	-,+	ZIC5,ZIC2	84,9881
chr1:46644855-46646255	chr1	+	46645034	46645959	True	NM_017739,NM_005727	chr1,chr1	-,+	POMGNT1,TSPAN1	18212,-4336
chr6:153296683-153297569	chr6	+	153296833	153297603	True	NM_194435,NM_012177,NM_001142522	chr6,chr6,chr6	+,-,-	VIP,FBXO5,FBXO5	-224967,6650,7187
chr4:3442029-3443606	chr4	+	3442099	3443512	True	NM_002337,NM_001528	chr4,chr4	-,+	LRPAP1,HGFAC	90762,213
chr4:39367902-39368202	chr4	+	39367907	39368248	True	NM_002913,NM_001204747,NM_175737	chr4,chr4,chr4	-,-,+	RFC1,RFC1,KLB	68,68,40224
chr3:116744913-116745346	chr3	+	116745178	116745308	True	NR_015391,NM_002338	chr3,chr3	+,-	NCRNA00295,LSAMP	-316594,-580793
chr8:134307748-134308630	chr8	+	134307859	134308343	True	NM_001135242,NR_037944,NM_006096	chr8,chr8,chr8	-,+,-	NDRG1,WISP1,NDRG1	1254,-104635,1254
chr3:133467926-133469092	chr3	+	133468054	133468904	True	NM_001063,NM_007027	chr3,chr3	+,-	TF,TOPBP1	-3128,-87317
chr11:67484077-67485478	chr11	+	67485005	67485169	True	NM_007103,NM_001031615	chr11,chr11	+,-	NDUFV1,ALDH3B2	-110733,-36320
chrY:25369004-25369503	chrY	+	25369160	25369347	True	NM_020364,NM_020420,NM_001005786,NM_001005785,NM_020363	chrY,chrY,chrY,chrY,chrY	+,+,+,+,+	DAZ3,DAZ4,DAZ2,DAZ2,DAZ2	-3637,-3637,-3614,-3614,-3614
chrY:25369004-25369503	chrY	-	25341487	25341674	False	NM_020364,NM_020420,NM_001005375,NM_004081	chrY,chrY,chrY,chrY	+,-,-,-	DAZ3,DAZ4,DAZ4,DAZ1	23906,3637,3637,3622
chrY:25369004-25369503	chrY	+	26983626	26983733	False	NM_020364,NM_020420,NM_001005375,NM_001005786,NM_001005785	chrY,chrY,chrY,chrY,chrY	+,+,+,+,+	DAZ3,DAZ4,DAZ4,DAZ2,DAZ2	-3723,-3723,-3723,-3700,-3700
chrY:25369004-25369503	chrY	-	26955872	26955979	False	NM_020364,NM_001005375,NM_020420	chrY,chrY,chrY	-,+,-	DAZ3,DAZ4,DAZ4	3723,23987,3723
chr1:206138860-206139143	chr1	+	206138887	206139158	True	NM_001123168,NM_001007544	chr1,chr1	+,-	FAM72A,C1orf186	-29,149542
chr1:206138860-206139143	chr1	+	120839415	120839686	False	NM_001004340,NM_001100910	chr1,chr1	-,+	FCGR1B,FAM72B	96311,-463
chr1:206138860-206139143	chr1	-	143912441	143912712	False	NM_207418,NR_034178	chr1,chr1	-,+	FAM72D,SRGAP2P2	483,3035
chr19:43442989-43443907	chr19	+	43443069	43443899	True	NM_002783,NR_036584	chr19,chr19	-,+	PSG7,LOC100289650	-1739,-117105
chr10:93687054-93688244	chr10	+	93687397	93688284	True	NM_152429,NM_003972	chr10,chr10	-,+	FGFBP3,BTAF1	-18139,-3722
chr6:15969738-15970803	chr6	+	15969876	15970822	True	NM_013262,NR_036448	chr6,chr6	+,-	MYLIP,DTNBP1	158494,-306587
chr1:154975935-154976177	chr1	+	154975934	154976154	True	NM_015872,NM_018655,NM_003029	chr1,chr1,chr1	+,+,-	ZBTB7B,LENEP,SHC1	-873,-9923,-28975
chr17:17141627-17141976	chr17	+	17141628	17141738	True	NM_144997,NM_020201,NM_144606	chr17,chr17,chr17	-,+,-	FLCN,NT5M,FLCN	-1126,64941,-1126
chr19:1810700-1811013	chr19	+	1810819	1810991	True	NR_031730,NR_034114,NM_138813,NM_001178002	chr19,chr19,chr19,chr19	-,+,-,-	MIR1909,LOC100288123,ATP8B3,ATP8B3	5296,11096,1329,1258
chr5:32315146-32316442	chr5	+	32315241	32316381	True	NM_001040446,NM_006713	chr5,chr5	-,+	MTMR12,SUB1	-2127,269223
chrX:48362524-48364038	chrX	+	48362534	48363834	True	NM_203475,NM_203474,NM_033518,NM_022825,NM_203473	chrX,chrX,chrX,chrX,chrX	+,+,-,+,+	PORCN,PORCN,SLC38A5,PORCN,PORCN	4337,4337,-33890,3536,3536
chr19:19249407-19250099	chr19	+	19249407	19250031	True	NM_017814,NM_003721	chr19,chr19	-,+	TMEM161A,RFXANK	-140,52976
chr7:102106369-102107158	chr7	+	102106625	102106819	True	NM_152892,NM_017621	chr7,chr7	+,-	LRWD1,ALKBH4	-1286,-1304
chr11:17100993-17102428	chr11	+	17101363	17102242	True	NM_005013,NM_001017	chr11,chr11	+,-	NUCB2,RPS13	196043,-2143
chr21:34397318-34397539	chr21	+	34397367	34397457	True	NR_024102,NM_005806	chr21,chr21	-,+	C21orf54,OLIG2	145134,781
chr8:11322610-11322828	chr8	+	11322614	11322858	True	NM_001715,NM_053279	chr8,chr8	+,-	BLK,FAM167A	28662,1468
chr4:76058504-76059176	chr4	+	76058619	76059176	True	NM_001729,NM_015393	chr4,chr4	-,+	BTC,PARM1	-338737,-200394
chr6:26108475-26109061	chr6	+	26108502	26109073	True	NM_003542,NM_005323	chr6,chr6	+,-	HIST1H4C,HIST1H1T	-4385,-138
chr3:156007247-156009086	chr3	+	156007300	156008806	True	NM_007107,NM_172159	chr3,chr3	-,+	SSR3,KCNAB1	264217,-31
chr10:32217089-32217378	chr10	+	32217154	32217380	True	NM_001026383,NM_018287	chr10,chr10	+,-	CCDC7,ARHGAP12	517660,440
chr3:195640203-195640505	chr3	+	195640228	195640482	True	NM_001098516,NM_005781	chr3,chr3	+,-	MUC20,TNK2	-189181,-4348
chr11:74460851-74461683	chr11	+	74460858	74461563	True	NM_015424,NM_001098638	chr11,chr11	-,+	CHRDL2,RNF169	-18672,-996
chr10:134603441-134603676	chr10	+	134603502	134603716	True	NM_005539,NM_177400	chr10,chr10	+,-	INPP5A,NKX6-2	-252200,-3965
chrX:153966119-153966785	chrX	+	153966403	153966817	True	NM_001081573,NM_001142463	chrX,chrX	-,+	GAB3,DKC1	12581,24213
chr15:79736436-79738255	chr15	+	79736466	79738299	True	NM_015206,NM_002891	chr15,chr15	+,-	KIAA1024,RASGRF1	-11659,-353251
chr3:151177210-151178586	chr3	+	151177241	151178459	True	NR_031678,NM_178822	chr3,chr3	+,-	MIR548H2,IGSF10	168860,-744
chr14:55219475-55221342	chr14	+	55220453	55221361	True	NR_036194,NM_001161577	chr14,chr14	-,+	MIR4308,SAMD4A	123600,144
chr8:12990470-12990718	chr8	+	12990575	12990755	True	NM_001099677,NM_006094	chr8,chr8	+,-	KIAA1456,DLC1	-120853,104
chr19:13260080-13260364	chr19	+	13260293	13260413	True	NM_004907,NM_003765	chr19,chr19	+,-	IER2,STX10	868,624
chr4:49322429-49322925	chr4	+	49322660	49322746	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-334459,-413845
chr11:46370205-46370643	chr11	+	46370222	46370664	True	NM_001199266,NM_001199267,NM_000741,NM_001199268,NM_201533,NM_003646	chr11,chr11,chr11,chr11,chr11,chr11	+,+,-,+,+,+	DGKZ,DGKZ,CHRM4,DGKZ,DGKZ,DGKZ	-1317,-1317,37493,-1317,-3456,-1317
chr6:143269709-143270707	chr6	+	143269765	143270528	True	NM_016108,NM_006734	chr6,chr6	+,-	AIG1,HIVEP2	111494,-3427
chr4:74603375-74604283	chr4	+	74603410	74604203	True	NM_000584,NM_201431	chr4,chr4	+,-	IL8,RASSF6	2019,-117070
chr10:82172506-82173315	chr10	+	82172582	82173308	True	NR_024572,NM_032333,NM_138812	chr10,chr10,chr10	+,+,-	C10orf58,C10orf58,DYDC1	282,-4393,-56082
chr6:112045380-112047010	chr6	+	112045485	112047049	True	NR_034109,NM_153047	chr6,chr6	+,-	LOC643749,FYN	-240861,-4220
chrX:13836876-13838646	chrX	+	13836928	13838593	True	NM_001001996,NM_001001995,NM_003611,NM_005278	chrX,chrX,chrX,chrX	-,-,+,-	GPM6B,GPM6B,OFD1,GPM6B	-1614,-1614,-84148,-1614
chr22:45702300-45702564	chr22	+	45702300	45702610	True	NM_017911,NM_001009880,NM_001104595	chr22,chr22,chr22	+,-,+	FAM118A,KIAA0930,FAM118A	3174,-65650,2470
chr6:70454825-70455119	chr6	+	70455013	70455141	True	NM_018368,NM_001858	chr6,chr6	-,+	LMBRD1,COL19A1	51962,121306
chr14:50157250-50158616	chr14	+	50157293	50158156	True	NM_172193,NM_001197330,NM_001197331,NM_002692	chr14,chr14,chr14,chr14	+,-,-,-	KLHDC1,POLE2,POLE2,POLE2	1666,-2195,-2195,-2195
chr8:105526338-105526652	chr8	+	105526342	105526544	True	NM_001385,NM_030788	chr8,chr8	-,+	DPYS,TM7SF4	-47065,-174340
chr16:4819009-4819417	chr16	+	4819090	4819382	True	NM_021646,NR_029453	chr16,chr16	-,+	ZNF500,LOC440335	-1924,19015
chr2:26567555-26568429	chr2	+	26567944	26568478	True	NM_033505,NM_153835	chr2,chr2	+,-	EPT1,GPR113	475,1257
chr1:20964571-20964978	chr1	+	20964600	20964852	True	NM_005216,NM_032409	chr1,chr1	-,+	DDOST,PINK1	23235,-4703
chr6:155584755-155585308	chr6	+	155584800	155585324	True	NM_001001346,NM_016020	chr6,chr6	+,-	CLDN20,TFB1M	-33,50343
chr10:104952333-104952551	chr10	+	104952341	104952453	True	NM_012229,NM_001134373,NM_001143909	chr10,chr10,chr10	-,-,+	NT5C2,NT5C2,LOC729020	653,653,53190
chr8:86153811-86154770	chr8	+	86153999	86154658	True	NM_001099673,NM_198584	chr8,chr8	-,+	C8orf59,CA13	-21356,3057
chr7:99915714-99917133	chr7	+	99915727	99915801	True	NM_001004351,NR_003613	chr7,chr7	+,-	SPDYE3,PMS2P1	-10453,18179
chr1:110581833-110582632	chr1	+	110582096	110582687	True	NM_033088,NM_006492	chr1,chr1	+,-	FAM40A,ALX3	-4913,30698
chr4:99847547-99848526	chr4	+	99847828	99848464	True	NM_001130678,NM_001130679,NM_015143,NM_001968	chr4,chr4,chr4,chr4	-,-,+,-	EIF4E,EIF4E,METAP1,EIF4E	1837,3380,68323,3380
chr1:27977841-27978639	chr1	+	27977873	27978688	True	NM_001143912,NM_005248	chr1,chr1	+,-	FAM76A,FGR	73801,-16146
chr6:91249354-91250239	chr6	+	91249389	91250292	True	NM_145331,NM_032602	chr6,chr6	-,+	MAP3K7,GJA10	46533,-645260
chr1:153939029-153939572	chr1	+	153939167	153939615	True	NM_014437,NM_130898,NM_181715	chr1,chr1,chr1	-,+,-	SLC39A1,CREB3L4,CRTC2	629,781,-8035
chr1:206134680-206134969	chr1	+	206134704	206134994	True	NM_001123168,NM_001007544	chr1,chr1	+,-	FAM72A,C1orf186	3916,153703
chr1:206134680-206134969	chr1	-	143916605	143916895	False	NM_207418,NR_034178	chr1,chr1	-,+	FAM72D,SRGAP2P2	-3462,-908
chr1:206134680-206134969	chr1	+	120835222	120835512	False	NM_001004340,NM_001100910	chr1,chr1	-,+	FCGR1B,FAM72B	100482,3492
chr7:74346990-74347808	chr7	+	74346992	74347280	True	NM_001025202,NM_001145063	chr7,chr7	-,+	STAG3L2,GATSL1	-40261,31802
chr7:74346990-74347808	chr7	+	72537504	72537786	False	NR_003664,NR_003580	chr7,chr7	-,+	SPDYE8P,LOC100093631	-37195,31225
chr7:74346990-74347808	chr7	-	74684849	74685131	False	NM_001003795,NR_003580	chr7,chr7	+,-	GTF2IRD2B,LOC100093631	-176561,-31390
chr7:74346990-74347808	chr7	-	74899106	74899388	False	NM_001145064,NR_003664	chr7,chr7	-,+	GATSL2,SPDYE8P	-31765,37144
chr8:104343259-104343683	chr8	+	104343429	104343703	True	NM_003506,NM_030780	chr8,chr8	+,-	FZD6,SLC25A32	-32429,83815
chr9:133586855-133587544	chr9	+	133587120	133587427	True	NM_007313,NR_027440	chr9,chr9	+,-	ABL1,LOC100272217	1840,-132239
chr6:150464456-150464702	chr6	+	150464527	150464715	True	NM_030949,NM_024518	chr6,chr6	+,-	PPP1R14C,ULBP3	-390,-74325
chr1:26186940-26187909	chr1	+	26187027	26187804	True	NM_024037,NM_178422,NM_001099626	chr1,chr1,chr1	-,-,+	C1orf135,PAQR7,FAM54B	-1179,9990,-39759
chr9:112402797-112403079	chr9	+	112402899	112402967	True	NM_002829,NM_001037293	chr9,chr9	-,+	PTPN3,PALM2	-142306,100
chr22:16435442-16437024	chr22	+	16435786	16436928	True	NM_001005239,NR_001591	chr22,chr22	-,+	OR11H1,psiTPTE22	12934,645872
chr22:16435442-16437024	chr14	+	20168068	20168771	False	NM_001197287,NM_172194	chr14,chr14	-,+	OR11H2,OR4Q3	13771,46815
chr22:16435442-16437024	chr14	-	19390463	19391605	False	NM_001145442,NM_001013354	chr14,chr14	-,+	POTEM,OR11H12	628724,-12928
chr1:47113443-47113905	chr1	+	47113445	47113761	True	NM_001042546,NM_001145474	chr1,chr1	-,+	ATPAF1,C1orf223	20400,23738
chr20:23028783-23029175	chr20	+	23028785	23029195	True	NM_001052,NM_000361	chr20,chr20	+,-	SSTR4,THBD	-12779,1156
chr11:124608369-124609582	chr11	+	124608851	124609387	True	NM_001126181,NM_006176,NM_014312	chr11,chr11,chr11	+,+,-	NRGN,NRGN,VSIG2	441,441,12772
chr11:60471147-60471684	chr11	+	60471207	60471497	True	NM_004778,NM_031457	chr11,chr11	-,+	GPR44,MS4A8B	151997,-4211
chr3:267664-268223	chr3	+	267721	267955	True	NM_000564,NM_006614	chr3,chr3	-,+	IL5RA,CHL1	2884153,-29122
chr10:102025571-102026094	chr10	+	102025654	102025886	True	NM_018294,NM_005063	chr10,chr10	-,+	CWF19L1,SCD	1601,80885
chr11:67235622-67236225	chr11	+	67235630	67236112	True	NM_001078651,NM_001078650,NM_025124,NM_145200	chr11,chr11,chr11,chr11	-,-,-,+	TMEM134,TMEM134,TMEM134,CABP4	669,669,669,-12863
chr1:15853045-15853392	chr1	+	15853057	15853323	True	NM_015291,NM_032996,NM_001229	chr1,chr1,chr1	+,-,-	DNAJC16,CASP9,CASP9	28,-1772,-2117
chr2:227708322-227709003	chr2	+	227708551	227708993	True	NM_001167608,NM_032276,NM_005544	chr2,chr2,chr2	+,+,-	RHBDD1,RHBDD1,IRS1	-7932,-7932,-45045
chr9:26950232-26951751	chr9	+	26950396	26951447	True	NM_001099224,NM_001031689,NM_025103,NM_001099223,NM_001099222	chr9,chr9,chr9,chr9,chr9	+,-,+,+,+	IFT74,PLAA,IFT74,IFT74,IFT74	4923,-2928,4923,-3422,-3149
chr17:38083132-38083358	chr17	+	38083175	38083327	True	NM_139280,NM_001042471,NM_018530,NM_001165959,NM_001165958,NM_001195545	chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,+	ORMDL3,GSDMB,GSDMB,GSDMB,GSDMB,LOC100505591	607,-8272,-9382,-8272,-8272,14399
chr22:39029287-39029637	chr22	+	39029291	39029511	True	NM_001002880,NM_001013647	chr22,chr22	+,-	CBY1,LOC646851	23146,23173
chr1:197278806-197280690	chr1	+	197279028	197280576	True	NM_201253,NM_194314	chr1,chr1	+,-	CRB1,ZBTB41	-41745,-109356
chr11:4668856-4670752	chr11	+	4668978	4670797	True	NM_018073,NM_001004751,NM_152430	chr11,chr11,chr11	-,+,+	TRIM68,OR51D1,OR51E1	-39541,-8091,-3880
chr8:67584786-67585547	chr8	+	67584957	67585025	True	NM_019607,NM_001204173,NM_025054	chr8,chr8,chr8	+,+,-	C8orf44,C8orf44-SGK3,VCPIP1	-5221,-5221,-5505
chr1:156025317-156025925	chr1	+	156025330	156025791	True	NM_020131,NM_014017,NM_001145264,NM_020387	chr1,chr1,chr1,chr1	-,+,+,+	UBQLN4,LAMTOR2,LAMTOR2,RAB25	-1814,-864,-864,5174
chr4:106856849-106858190	chr4	+	106856869	106858189	True	NM_020395,NM_001184693	chr4,chr4	-,+	INTS12,NPNT	-226988,-40333
chr2:242752128-242752337	chr2	+	242752144	242752374	True	NM_001167599,NM_005018,NM_080741,NM_001167601,NM_001167600,NM_001167602	chr2,chr2,chr2,chr2,chr2,chr2	+,-,+,+,+,+	NEU4,PDCD1,NEU4,NEU4,NEU4,NEU4	-165,48734,-165,-2035,-2035,-165
chr1:205089656-205091020	chr1	+	205090025	205090903	True	NM_001193273,NM_001193272,NM_005076,NM_005057	chr1,chr1,chr1,chr1	-,-,+,-	RBBP5,RBBP5,CNTN2,RBBP5	297,297,-77736,297
chr12:54813529-54813832	chr12	+	54813556	54813870	True	NM_005337,NM_002205	chr12,chr12	+,-	NCKAP1L,ITGA5	77624,-506
chr3:47205359-47205619	chr3	+	47205379	47205637	True	NM_014159,NR_033373	chr3,chr3	-,+	SETD2,FLJ39534	72,222
chr1:155033911-155034430	chr1	+	155033922	155034462	True	NM_182689,NM_144622,NM_182690,NM_005227	chr1,chr1,chr1,chr1	+,-,+,+	EFNA4,DCST2,EFNA4,EFNA4	1750,-27665,1750,1750
chr14:27062495-27062725	chr14	+	27062494	27062754	True	NM_002515,NM_006489,NR_036193,NM_006491	chr14,chr14,chr14,chr14	-,-,+,-	NOVA1,NOVA1,MIR4307,NOVA1	4260,4260,315093,4260
chr16:1729416-1729805	chr16	+	1729709	1729785	True	NM_144570,NM_014714	chr16,chr16	+,-	HN1L,IFT140	-1485,-67600
chr14:95109602-95110098	chr14	+	95109648	95110090	True	NM_173850,NR_015340	chr14,chr14	-,+	SERPINA12,SERPINA13	-125467,-2637
chr16:31470479-31470694	chr16	+	31470490	31470694	True	NM_001136509,NM_024742,NM_001105247	chr16,chr16,chr16	-,+,+	ZNF843,ARMC5,ARMC5	-16142,-224,-224
chr3:14990145-14990400	chr3	+	14990182	14990322	True	NM_022497,NM_003298	chr3,chr3	-,+	MRPS25,NR2C2	116544,-997
chr7:27196757-27196990	chr7	+	27196809	27196923	True	NM_152739,NR_002795,NM_024014,NM_006896	chr7,chr7,chr7,chr7	-,+,-,-	HOXA9,HOXA11-AS1,HOXA6,HOXA7	8276,28103,-9441,-513
chrX:49368721-49369169	chrX	+	49368741	49369209	True	NM_003785,NM_001040663,NM_001468	chrX,chrX,chrX	-,+,+	PAGE1,GAGE1,GAGE1	91439,-5185,-5185
chr14:105154992-105155286	chr14	+	105155109	105155221	True	NM_207379,NM_032714,NM_001031714,NM_022489	chr14,chr14,chr14,chr14	-,+,+,+	TMEM179,INF2,INF2,INF2	-84012,721,721,721
chr7:128283830-128285653	chr7	+	128284257	128285135	True	NR_024368,NM_001708	chr7,chr7	+,-	FLJ45340,OPN1SW	-3013,130759
chr1:153508873-153509282	chr1	+	153509011	153509305	True	NM_002962,NM_002961,NM_019554,NM_014624,NM_006271	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	S100A5,S100A4,S100A4,S100A6,S100A1	4986,9027,9027,-294,91567
chr15:79105846-79106357	chr15	+	79105947	79106350	True	NM_014272,NM_006791	chr15,chr15	-,+	ADAMTS7,MORF4L1	-2174,58821
chr2:223518458-223519637	chr2	+	223518614	223519629	True	NM_058165,NM_005687	chr2,chr2	+,-	MOGAT1,FARSB	16827,1249
chr3:100615192-100615576	chr3	+	100615194	100615607	True	NM_015429,NM_001195478	chr3,chr3	-,+	ABI3BP,TFG	96778,-186861
chr1:44497692-44499477	chr1	+	44498168	44499278	True	NM_001024845,NM_152499	chr1,chr1	-,+	SLC6A9,CCDC24	-1034,-40939
chr3:14444747-14445041	chr3	+	14444784	14445004	True	NM_001134367,NM_001080423,NM_001134368,NM_003043	chr3,chr3,chr3,chr3	+,-,+,+	SLC6A6,GRIP2,SLC6A6,SLC6A6	-729,138634,-729,-729
chr15:76356273-76356921	chr15	+	76356309	76356854	True	NM_152335,NM_138573	chr15,chr15	+,-	C15orf27,NRG4	-4061,-51524
chr7:19812780-19813153	chr7	+	19812836	19813139	True	NM_152774,NM_002214	chr7,chr7	-,+	TMEM196,ITGB8	-432,557585
chr5:102593412-102594121	chr5	+	102593454	102594158	True	NM_033211,NM_017676	chr5,chr5	+,-	C5orf30,GIN1	283,-137612
chr20:2362027-2362657	chr20	+	2362061	2362653	True	NR_003684,NM_198994	chr20,chr20	-,+	SNORD119,TGM6	81090,-558
chr2:9349991-9350842	chr2	+	9350128	9350572	True	NM_003887,NM_001135191,NM_138799	chr2,chr2,chr2	+,+,-	ASAP2,ASAP2,MBOAT2	-3292,-3292,-206252
chr7:63505144-63505985	chr7	+	63505276	63505906	True	NM_178558,NM_001159522	chr7,chr7	-,+	ZNF680,ZNF727	517649,18
chr13:44362741-44363558	chr13	+	44362967	44363574	True	NM_017993,NM_001128303	chr13,chr13	-,+	ENOX1,C13orf31	-1861,89845
chr17:33917230-33918350	chr17	+	33917229	33917788	True	NM_001282,NM_001030006,NM_000286	chr17,chr17,chr17	+,+,-	AP2B1,AP2B1,PEX12	-3001,-3001,-11573
chr2:224900517-224902071	chr2	+	224900866	224902079	True	NM_022915,NM_001136530,NM_006216,NM_001136528	chr2,chr2,chr2,chr2	+,-,-,-	MRPL44,SERPINE2,SERPINE2,SERPINE2	-78796,1328,2007,2007
chr2:63274499-63274710	chr2	+	63274549	63274675	True	NR_027069,NM_014562,NM_001199770,NR_033389	chr2,chr2,chr2,chr2	-,+,+,-	LOC100132215,OTX1,OTX1,LOC100132215	221,3261,2516,1031
chr9:101892266-101893973	chr9	+	101892340	101893661	True	NM_004612,NM_033087	chr9,chr9	+,-	TGFBR1,ALG2	-24979,90635
chr3:195539031-195540484	chr3	+	195539489	195540399	True	NM_018406,NM_138297,NM_001098516,NM_004532	chr3,chr3,chr3,chr3	-,-,+,-	MUC4,MUC4,MUC20,MUC4	-341,-341,-88442,-341
chr10:13026002-13027966	chr10	+	13026257	13027579	True	NM_031455,NM_001008211	chr10,chr10	-,+	CCDC3,OPTN	16175,114502
chr11:33741575-33742882	chr11	+	33741610	33742911	True	NM_001127223,NM_001127227,NM_001127226,NM_001127225,NM_012194	chr11,chr11,chr11,chr11,chr11	-,-,-,-,+	CD59,CD59,CD59,CD59,C11orf41	1412,1637,1412,1412,-177784
chr9:95859024-95859420	chr9	+	95859027	95859367	True	NM_032310,NM_004148	chr9,chr9	+,-	C9orf89,NINJ1	-628,37253
chr1:9889068-9889703	chr1	+	9889232	9889748	True	NM_022787,NM_001009566,NM_014944	chr1,chr1,chr1	+,-,-	NMNAT1,CLSTN1,CLSTN1	113737,-4682,-4682
chr9:100744651-100744981	chr9	+	100744725	100744926	True	NM_018437,NM_006401	chr9,chr9	-,+	HEMGN,ANP32B	-37591,562
chr14:23426769-23427155	chr14	+	23426893	23427202	True	NM_017815,NM_173527,NM_001166269,NM_001166270	chr14,chr14,chr14,chr14	-,+,-,-	HAUS4,REM2,HAUS4,HAUS4	-542,-74512,-542,-542
chr4:123661744-123662500	chr4	+	123661869	123662297	True	NM_001178007,NM_152618,NR_024041	chr4,chr4,chr4	+,+,-	BBS12,BBS12,CETN4P	-8063,-8063,-8256
chr17:7136922-7137360	chr17	+	7137037	7137409	True	NM_001033859,NM_024297,NM_007278,NM_004422	chr17,chr17,chr17,chr17	+,-,-,-	ACADVL,PHF23,GABARAP,DVL2	-13935,5466,8394,504
chr16:4354418-4354666	chr16	+	4354422	4354616	True	NM_032575,NM_003223	chr16,chr16	+,-	GLIS2,TFAP4	27608,-31421
chr4:146618507-146620131	chr4	+	146618670	146619750	True	NM_001080531,NM_178835	chr4,chr4	+,-	C4orf51,ZNF827	-17373,239915
chr16:55909391-55909617	chr16	+	55909411	55909593	True	NM_145024,NR_003276,NM_001143685	chr16,chr16,chr16	-,+,-	CES5A,CES1P1,CES5A	-129,-114959,-129
chr19:39694282-39694491	chr19	+	39694347	39694539	True	NM_001080468,NM_001001414	chr19,chr19	-,+	SYCN,NCCRP1	417,-6794
chrX:38206938-38208850	chrX	+	38207008	38208866	True	NM_001034853,NM_000531	chrX,chrX	-,+	RPGR,OTC	-20220,2869
chr12:22696634-22697049	chr12	+	22696662	22697070	True	NM_014802,NM_001039481	chr12,chr12	-,+	KIAA0528,ETNK1	432,81005
chr1:202612516-202612789	chr1	+	202612630	202612806	True	NM_001136504,NM_001197131	chr1,chr1	-,+	SYT2,PPP1R12B	-49,-103439
chr8:22961265-22963096	chr8	+	22961276	22962643	True	NM_003841,NR_027140	chr8,chr8	+,-	TNFRSF10C,TNFRSF10B	-1001,-34576
chr3:39366114-39367206	chr3	+	39366201	39367214	True	NM_005201,NM_001171174	chr3,chr3	+,-	CCR8,CX3CR1	3982,-42975
chr14:39856243-39857822	chr14	+	39856258	39857467	True	NM_203355,NM_203301	chr14,chr14	+,-	CTAGE5,FBXO33	-119981,44298
chr3:12082091-12082680	chr3	+	12082260	12082718	True	NM_003256,NM_133625	chr3,chr3	-,+	TIMP4,SYN2	118183,-36449
chr4:48271105-48271531	chr4	+	48271142	48271530	True	NM_020846,NM_003215	chr4,chr4	+,-	SLAIN2,TEC	72082,334
chr1:201924862-201925809	chr1	+	201924900	201925713	True	NM_006335,NM_012134	chr1,chr1	+,-	TIMM17A,LMOD1	-332,-9184
chr5:43481410-43482035	chr5	+	43481471	43481867	True	NM_022483,NM_012343	chr5,chr5	-,+	C5orf28,NNT	2175,120923
chr18:658881-659426	chr18	+	659005	659361	True	NM_001071,NM_001012716	chr18,chr18	+,-	TYMS,C18orf56	-1459,-665
chr16:30084274-30085253	chr16	+	30084405	30085156	True	NM_002720,NM_004608,NM_184043,NM_184041,NM_001127617	chr16,chr16,chr16,chr16,chr16	+,-,+,+,+	PPP4C,TBX6,ALDOA,ALDOA,ALDOA	2227,18099,-8865,-7421,-8492
chr16:47477645-47479098	chr16	+	47477896	47479010	True	NM_030790,NM_000293	chr16,chr16	-,+	ITFG1,PHKB	16069,16199
chr12:104853156-104854333	chr12	+	104853184	104854124	True	NM_006166,NM_001173982,NM_018413	chr12,chr12,chr12	-,+,+	NFYB,CHST11,CHST11	-321144,-2543,-2543
chr12:97858898-97859106	chr12	+	97858935	97859145	True	NR_024037,NR_036189	chr12,chr12	+,-	RMST,MIR4303	-187,530131
chr1:157804404-157805602	chr1	+	157804575	157805571	True	NM_005894,NM_018240	chr1,chr1	-,+	CD5L,KIRREL	6113,157491
chr7:75989098-75989993	chr7	+	75989182	75989698	True	NM_012479,NM_007155	chr7,chr7	-,+	YWHAG,ZP3	-840,37142
chr17:73718154-73718979	chr17	+	73718218	73718962	True	NM_000154,NM_000213,NM_001005619,NM_001005731	chr17,chr17,chr17,chr17	-,+,+,+	GALK1,ITGB4,ITGB4,ITGB4	42368,-753,1813,-753
chr7:90000242-90000938	chr7	+	90000488	90000984	True	NM_006980,NM_033107	chr7,chr7	-,+	MTERF,GTPBP10	1509086,-24572
chr10:112684751-112685507	chr10	+	112684999	112685560	True	NM_007373,NM_001195305,NM_001195304,NM_001195307,NM_001195306,NR_024141	chr10,chr10,chr10,chr10,chr10,chr10	+,-,-,-,-,-	SHOC2,BBIP1,BBIP1,BBIP1,BBIP1,BBIP1	-5756,-5875,-5875,-5875,-6305,-5875
chr2:38358540-38358924	chr2	+	38358542	38358940	True	NR_027252,NM_000104	chr2,chr2	+,-	C2orf58,CYP1B1	-346,-55219
chr11:67406427-67406719	chr11	+	67406534	67406760	True	NM_007103,NM_181843,NM_005995	chr11,chr11,chr11	+,-,-	NDUFV1,NUDT8,TBX10	-32262,-9133,321
chr5:137420150-137420715	chr5	+	137420225	137420592	True	NM_016603,NM_058244	chr5,chr5	-,+	FAM13B,WNT8A	-51423,-502
chr14:101125006-101125405	chr14	+	101125173	101125315	True	NR_024096,NM_020836	chr14,chr14	+,-	C14orf70,BEGAIN	-1619,-89042
chr10:135090599-135090818	chr10	+	135090720	135090858	True	NM_001164490,NM_001109,NM_145806,NM_001164489	chr10,chr10,chr10,chr10	-,-,+,-	ADAM8,ADAM8,ZNF511,ADAM8	-313,-313,31564,-313
chr1:22301183-22301395	chr1	+	22301199	22301415	True	NM_005529,NM_007352	chr1,chr1	-,+	HSPG2,CELA3B	-37449,2002
chr1:22301183-22301395	chr1	+	22326153	22326231	False	NM_005529,NM_005747	chr1,chr1	-,+	HSPG2,CELA3A	-62403,1917
chr6:43598402-43599727	chr6	+	43598716	43599204	True	NM_014628,NM_001003690,NM_019096	chr6,chr6,chr6	+,+,-	MAD2L1BP,MAD2L1BP,GTPBP2	4372,-1489,-1780
chr9:96215552-96215892	chr9	+	96215629	96215933	True	NM_198841,NM_014612	chr9,chr9	-,+	FAM120AOS,FAM120A	-9,-1508
chr19:46799240-46800280	chr19	+	46799329	46800208	True	NM_152796,NM_152795,NM_022462,NM_152794,NM_032040	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	HIF3A,HIF3A,HIF3A,HIF3A,CCDC8	1424,94,1424,6647,116761
chr3:138724614-138724953	chr3	+	138724664	138724876	True	NM_001040061,NM_001134659	chr3,chr3	+,-	C3orf72,PRR23A	-58639,284
chr9:71316451-71316922	chr9	+	71316474	71316960	True	NM_003558,NM_153237	chr9,chr9	+,-	PIP5K1B,C9orf71	3655,-160691
chr15:81513068-81513623	chr15	+	81513179	81513621	True	NM_181900,NM_172217	chr15,chr15	-,+	STARD5,IL16	102953,4018
chr10:75252888-75254204	chr10	+	75253054	75254032	True	NM_001142353,NM_021132,NM_004922,NM_001142354	chr10,chr10,chr10,chr10	-,-,+,-	PPP3CB,PPP3CB,SEC24C,PPP3CB	1800,1800,250098,1800
chr17:28563251-28563511	chr17	+	28563303	28563411	True	NR_029945,NM_001045	chr17,chr17	+,-	MIR423,SLC6A4	-119265,-349
chr15:80986186-80986737	chr15	+	80986291	80986762	True	NM_021214,NR_030393	chr15,chr15	+,-	FAM108C1,MIR549	889,147707
chr6:2988035-2988918	chr6	+	2988167	2988787	True	NR_026855,NR_026856,NM_004568	chr6,chr6,chr6	+,+,-	DKFZP686I15217,DKFZP686I15217,SERPINB6	-17,-17,-15768
chr9:130888993-130889697	chr9	+	130889490	130889618	True	NR_027812,NR_033374,NR_024425,NR_027811,NM_025072	chr9,chr9,chr9,chr9,chr9	-,-,+,-,-	PTGES2,LOC100289019,LOC389791,PTGES2,PTGES2	1144,-8477,1189,1144,906
chr15:48419267-48419942	chr15	+	48419344	48419611	True	NM_205850,NM_016132	chr15,chr15	+,-	SLC24A5,MYEF2	-6233,51004
chr9:31254389-31254605	chr9	+	31254407	31254641	True	NM_014314,NM_002197	chr9,chr9	-,+	DDX58,ACO1	1271731,1129959
chr19:1755551-1755774	chr19	+	1755618	1755756	True	NM_001178002,NM_001080488	chr19,chr19	-,+	ATP8B3,ONECUT3	56493,-2007
chr17:18164088-18164293	chr17	+	18164249	18164337	True	NM_001144900,NM_002018,NM_148886,NM_139162	chr17,chr17,chr17,chr17	+,-,+,+	SMCR7,FLII,SMCR7,SMCR7	-452,-2194,86,-452
chr17:79764215-79764434	chr17	+	79764226	79764480	True	NM_000160,NM_001093767	chr17,chr17	+,-	GCGR,FAM195B	-2267,26737
chr22:25389133-25389430	chr22	+	25389260	25389470	True	NM_001001663,NM_001145206	chr22,chr22	-,+	TMEM211,KIAA1671	-53946,34470
chr19:58476796-58477436	chr19	+	58477157	58477238	True	NR_036508,NM_152474	chr19,chr19	+,-	LOC100128398,C19orf18	37023,8729
chr19:9930156-9931682	chr19	+	9930196	9930966	True	NM_001048241,NM_024292,NM_017703	chr19,chr19,chr19	+,+,-	UBL5,UBL5,FBXL12	7601,7601,-465
chr14:74083771-74084088	chr14	+	74083826	74084033	True	NM_001037162,NM_203309	chr14,chr14	+,-	ACOT6,HEATR4	-333,-58175
chr1:146643912-146644144	chr1	+	146644028	146644180	True	NR_002305,NM_005399	chr1,chr1	+,-	PDIA3P,PRKAB2	5249,-1
chr10:56556289-56556844	chr10	+	56556295	56556893	True	NM_001142763,NM_033056,NM_001142770,NM_001142771,NM_001142772,NM_001142773,NM_001142767,NM_001142766,NM_001142765,NM_001142764,NM_001190478,NM_001142769,NM_001142768	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,-,-,-,-,-,-,+,-,-	PCDH15,PCDH15,PCDH15,PCDH15,PCDH15,PCDH15,PCDH15,PCDH15,PCDH15,PCDH15,MTRNR2L5,PCDH15,PCDH15	4208,4208,4208,4208,4208,4208,4208,4208,4208,4208,801856,4208,4208
chr1:47655637-47656421	chr1	+	47655658	47656460	True	NM_005764,NM_001010969	chr1,chr1	-,+	PDZK1IP1,CYP4A22	113,-52602
chr22:22241642-22243423	chr22	+	22242551	22242917	True	NM_148176,NM_138957	chr22,chr22	+,-	PPIL2,MAPK1	-222341,-20581
chr20:17680806-17681865	chr20	+	17681015	17681821	True	NM_001014977,NM_001159495,NM_004587,NM_178477	chr20,chr20,chr20,chr20	+,+,-,+	BANF2,BANF2,RRBP1,BANF2	-474,-6747,-18087,-474
chr22:23487025-23487415	chr22	+	23487068	23487339	True	NM_004914,NM_014433	chr22,chr22	+,-	RAB36,RTDR1	173,-2827
chr16:1032950-1033344	chr16	+	1032952	1033390	True	NR_033645,NM_014587,NR_036442	chr16,chr16,chr16	-,+,-	LMF1,SOX8,LMF1	-1634,-1195,-1634
chr8:24770466-24771021	chr8	+	24770539	24771051	True	NM_005382,NM_006158,NM_001105541	chr8,chr8,chr8	+,-,+	NEFM,NEFL,NEFM	222,43130,1403
chr7:100200071-100200779	chr7	+	100200164	100200746	True	NM_001040098,NM_001040097,NM_002593,NM_023948,NM_002319,NM_001040099	chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,-,+	MOSPD3,MOSPD3,PCOLCE,MOSPD3,LRCH4,MOSPD3	9306,8978,-333,9367,-16388,9367
chr14:41126863-41127366	chr14	+	41126986	41127251	True	NM_152447,NM_203301	chr14,chr14	+,-	LRFN5,FBXO33	949512,-1225282
chr22:40741185-40741725	chr22	+	40741476	40741538	True	NM_001123378,NM_000026,NM_020831	chr22,chr22,chr22	+,+,-	ADSL,ADSL,MKL1	965,965,291202
chr19:13228232-13228458	chr19	+	13228231	13228348	True	NM_017722,NM_001136035,NM_001142554,NM_052876	chr19,chr19,chr19,chr19	-,-,-,+	TRMT1,TRMT1,TRMT1,NACC1	-768,-668,-768,760
chr22:31799760-31801449	chr22	+	31799814	31801497	True	NM_032051,NM_004147	chr22,chr22	-,+	PATZ1,DRG1	-57565,-4326
chr17:30676522-30676968	chr17	+	30676628	30676912	True	NM_001098507,NM_022344,NR_030362,NM_001032293,NM_003457	chr17,chr17,chr17,chr17,chr17	+,-,+,+,+	ZNF207,C17orf75,MIR632,ZNF207,ZNF207	244,-7439,215,244,244
chr6:84085049-84086239	chr6	+	84085642	84085754	True	NM_002395,NM_001170423	chr6,chr6	-,+	ME1,PRSS35	55244,136439
chr1:248021027-248021596	chr1	+	248021289	248021473	True	NM_015431,NM_001001959	chr1,chr1	+,-	TRIM58,OR11L1	-849,-16091
chr11:60719759-60720091	chr11	+	60719868	60720140	True	NR_027391,NM_006725,NM_016582	chr11,chr11,chr11	-,+,-	SLC15A3,CD6,SLC15A3	-611,18974,-611
chr18:24282226-24282788	chr18	+	24282230	24282429	True	NR_026908,NR_024259	chr18,chr18	+,-	C18orf16,LOC728606	162842,1232
chr6:52859753-52860097	chr6	+	52859757	52860114	True	NM_001512,NM_033481	chr6,chr6	-,+	GSTA4,FBXO9	114,69681
chr17:11500991-11501870	chr17	+	11501252	11501668	True	NM_144680,NM_001372	chr17,chr17	-,+	ZNF18,DNAH9	399071,79
chr9:120476546-120477910	chr9	+	120476563	120477828	True	NR_024169,NM_014010	chr9,chr9	+,-	TLR4,ASTN2	-10155,-299246
chr17:27045111-27045506	chr17	+	27045158	27045514	True	NR_024575,NR_024579,NM_000984,NR_000014,NM_031934,NM_001142624,NR_000013,NR_000009,NR_000010,NM_138463,NM_001142625,NM_152465,NM_001160407,NM_001144943,NM_001144942	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,+,-,-,+,+,+,-,-,-,-,-,-	RAB34,RAB34,RPL23A,SNORD42A,RAB34,RAB34,SNORD42B,SNORD4B,SNORD4A,TLCD1,RAB34,PROCA1,TLCD1,RAB34,RAB34	93,93,1485,4932,-250,-84,2053,5184,4085,7766,-84,-6286,8485,-84,-250
chr1:161103006-161103731	chr1	+	161103010	161103702	True	NM_001185094,NM_032998,NM_001039712,NM_001039711	chr1,chr1,chr1,chr1	+,-,-,-	NIT1,DEDD,DEDD,DEDD	-15153,-532,-754,-532
chr7:155752862-155753291	chr7	+	155752989	155753279	True	NM_000193,NM_053043	chr7,chr7	-,+	SHH,RBM33	-148022,-315837
chr16:15528407-15528643	chr16	+	15528448	15528570	True	NM_033201,NM_001184998	chr16,chr16	+,-	C16orf45,KIAA0430	-174,208503
chr12:45443937-45444201	chr12	+	45443973	45444195	True	NM_001004329,NM_001025356	chr12,chr12	-,+	DBX2,ANO6	737,165574
chr7:140713728-140714144	chr7	+	140713734	140714188	True	NM_016071,NM_053035,NM_001195278	chr7,chr7,chr7	-,-,+	MRPS33,MRPS33,LOC100131199	341,643,59843
chr6:30898192-30899218	chr6_dbb_hap3	+	2192507	2192575	False	NM_205854,NM_080870	chr6_dbb_hap3,chr6_dbb_hap3	-,+	SFTA2,DPCR1	1537,10317
chr6:30898192-30899218	chr6	+	30898397	30898465	True	NM_205854,NM_080870	chr6,chr6	-,+	SFTA2,DPCR1	1537,10311
chr6:30898192-30899218	chr6_mann_hap4	+	2246478	2246546	False	NM_205854,NM_001167734	chr6_mann_hap4,chr6_mann_hap4	-,+	SFTA2,VARS2	1537,-16342
chr6:30898192-30899218	chr6_cox_hap2	+	2410320	2410388	False	NM_205854,NM_080870	chr6_cox_hap2,chr6_cox_hap2	-,+	SFTA2,DPCR1	1537,10301
chr15:95985621-95986802	chr15	+	95985637	95986763	True	NR_027133,NR_027132,NR_034095	chr15,chr15,chr15	+,+,-	LOC145820,LOC145820,LOC400456	-9366,-9366,-115308
chr6:35109250-35109716	chr6	+	35109332	35109680	True	NM_018679,NM_152753,NM_001093728	chr6,chr6,chr6	-,+,-	TCP11,SCUBE3,TCP11	-145,72509,-145
chr14:94425058-94425311	chr14	+	94425138	94425306	True	NM_016150,NR_024182	chr14,chr14	-,+	ASB2,C14orf48	-1371,38309
chr5:148932316-148932680	chr5	+	148932446	148932637	True	NM_001892,NM_001001669,NM_001025105	chr5,chr5,chr5	-,+,-	CSNK1A1,ARHGEF37,CSNK1A1	-1439,28497,-1439
chr1:20833631-20834365	chr1	+	20833800	20834208	True	NM_024544,NM_207334	chr1,chr1	-,+	MUL1,FAM43B	516,44723
chr17:27228299-27228509	chr17	+	27228322	27228556	True	NM_144683,NM_005702,NM_004475	chr17,chr17,chr17	-,+,-	DHRS13,ERAL1,FLOT2	1583,-46330,-3607
chr13:51660297-51660702	chr13	+	51660470	51660556	True	NR_003923,NM_145019	chr13,chr13	-,+	GUCY1B2,FAM124A	-20177,135950
chr12:15941494-15941848	chr12	+	15941547	15941817	True	NM_004447,NM_007178	chr12,chr12	-,+	EPS8,STRAP	743,93470
chr7:116502527-116502742	chr7	+	116502648	116502712	True	NR_002330,NM_006136	chr7,chr7	-,+	ST7OT1,CAPZA2	91726,-136
chr1:19279448-19280460	chr1	+	19279584	19280454	True	NM_001136265,NM_016183	chr1,chr1	-,+	IFFO2,MRTO4	2422,297620
chrX:103405299-103406376	chrX	+	103405570	103406150	True	NM_001012755,NM_207318	chrX,chrX	-,+	MCART6,FAM199X	-3862,5150
chr20:3662946-3663236	chr20	+	3662976	3663208	True	NM_153202,NM_001197327,NM_025220	chr20,chr20,chr20	-,+,-	ADAM33,HSPA12B,ADAM33	-238,50108,-238
chr2:71454271-71454476	chr2	+	71454285	71454521	True	NM_005791,NM_020459	chr2,chr2	+,-	MPHOSPH10,PAIP2B	-96892,-52
chr16:57574861-57575380	chr16	+	57575024	57575340	True	NM_033212,NM_153837	chr16,chr16	-,+	CCDC102A,GPR114	-4547,1260
chr3:185541727-185542128	chr3	+	185541747	185542121	True	NM_006548,NM_001007225,NR_027317	chr3,chr3,chr3	-,-,+	IGF2BP2,IGF2BP2,C3orf65	756,756,-110758
chr16:2204505-2204871	chr16	+	2204662	2204902	True	NR_002736,NM_014353,NM_032271	chr16,chr16,chr16	-,+,+	SNORD60,RAB26,TRAF7	254,-6062,896
chr7:15719683-15721440	chr7	+	15720019	15721470	True	NM_001195280,NM_005924	chr7,chr7	+,-	LOC100506049,MEOX2	845034,4890
chr17:19620944-19622258	chr17	+	19621190	19621974	True	NM_001099646,NM_000382,NM_152908	chr17,chr17,chr17	-,+,-	SLC47A2,ALDH3A2,SLC47A2	-1147,-69177,-1147
chr1:32712049-32712754	chr1	+	32712376	32712720	True	NM_032648,NR_026850,NM_005356	chr1,chr1,chr1	+,-,+	FAM167B,MTMR9LP,LCK	97,-5065,4119
chr7:92774077-92774881	chr7	+	92774297	92774918	True	NM_024553,NM_152703	chr7,chr7	+,-	CCDC132,SAMD9L	86734,2819
chr10:75254204-75255032	chr10	+	75254341	75254834	True	NM_001142353,NM_021132,NM_004922,NM_001142354	chr10,chr10,chr10,chr10	-,-,+,-	PPP3CB,PPP3CB,SEC24C,PPP3CB	998,998,249296,998
chr1:156586598-156588015	chr1	+	156586909	156587682	True	NM_182679,NM_021817	chr1,chr1	-,+	GPATCH4,HAPLN2	-15630,1403
chr15:84128235-84129556	chr15	+	84128244	84129532	True	NM_001717,NR_026799	chr15,chr15	-,+	BNC1,SH3GL3	-174776,-12204
chr7:44835823-44836142	chr7	+	44835840	44836184	True	NM_138635,NM_021130	chr7,chr7	-,+	H2AFV,PPIA	51591,56
chr16:66876870-66877294	chr16	+	66876908	66877284	True	NM_001014435,NM_005182,NM_003905	chr16,chr16,chr16	+,+,-	CA7,CA7,NAE1	1556,997,-12029
chr8:38761336-38761676	chr8	+	38761339	38761573	True	NM_021623,NM_001024380	chr8,chr8	+,-	PLEKHA2,TM2D2	-2637,92518
chr18:37307734-37308348	chr18	+	37307757	37308349	True	NR_024391,NR_036202	chr18,chr18	-,+	LOC647946,MIR4318	23660,-2070715
chr12:110841227-110841480	chr12	+	110841310	110841512	True	NM_001137664,NM_016238,NM_013300	chr12,chr12,chr12	-,-,+	ANAPC7,ANAPC7,C12orf24	73,73,64719
chr14:77914456-77914845	chr14	+	77914596	77914870	True	NM_012111,NM_022067,NM_001193314,NM_001193315,NM_001193316,NM_001193317	chr14,chr14,chr14,chr14,chr14,chr14	+,-,-,-,-,-	AHSA1,VIPAR,VIPAR,VIPAR,VIPAR,VIPAR	9502,9163,9163,9163,9163,9163
chr12:62865663-62867644	chr12	+	62865669	62867320	True	NM_175895,NM_015026	chr12,chr12	-,+	C12orf61,MON2	129946,-5123
chr8:27099135-27099445	chr8	+	27099202	27099382	True	NM_173174,NM_030795	chr8,chr8	+,-	PTK2B,STMN4	69616,16571
chr4:142055258-142055710	chr4	+	142055345	142055726	True	NM_020724,NM_014487	chr4,chr4	-,+	RNF150,ZNF330	-729,86322
chrY:10037176-10037430	chrY	+	10037251	10037313	True	NR_003593,NR_003589	chrY,chrY	+,-	TTTY23B,TTTY1B	-288895,-425323
chr2:79363025-79363915	chr2	+	79363028	79363886	True	NR_002714,NM_002909	chr2,chr2	-,+	REG1P,REG1A	1717,-15496
chr11:119296833-119298116	chr11	+	119296934	119298090	True	NM_006288,NR_034160	chr11,chr11	-,+	THY1,LOC100499227	-2688,-44499
chr11:64762721-64763017	chr11	+	64762751	64763061	True	NM_001199745,NM_138456	chr11,chr11	+,-	ARL2,BATF2	18523,1506
chr20:55040476-55041055	chr20	+	55040680	55041103	True	NM_080615,NM_016407	chr20,chr20	-,+	GCNT7,C20orf43	59928,2543
chr9:104499280-104499512	chr9	+	104499324	104499446	True	NM_019592,NM_133445	chr9,chr9	+,-	RNF20,GRIN3A	-203242,1466
chr10:18430688-18431412	chr10	+	18430740	18431457	True	NM_001167945,NM_201596,NM_201597,NM_201593,NM_201572,NM_201571,NM_182543	chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,+,-	CACNB2,CACNB2,CACNB2,CACNB2,CACNB2,CACNB2,NSUN6	-1050,-1186,-1186,-1186,-1050,-1050,509150
chr10:1032734-1032952	chr10	+	1032899	1032995	True	NM_033261,NM_012341	chr10,chr10	-,+	IDI2,GTPBP4	38862,1353
chr1:229694958-229695263	chr1	+	229695011	229695136	True	NM_012089,NM_014777	chr1,chr1	-,+	ABCB10,URB2	-569,66844
chr3:173113657-173113876	chr3	+	173113715	173113775	True	NM_014932,NM_031955	chr3,chr3	+,-	NLGN1,SPATA16	2468,-254657
chr6:87663256-87664823	chr6	+	87663259	87664797	True	NM_000735,NM_000865	chr6,chr6	-,+	CGA,HTR1E	140077,-16287
chr5:162887622-162888399	chr5	+	162887626	162888420	True	NM_012484,NM_012485,NM_145266,NM_001142556,NM_001142557	chr5,chr5,chr5,chr5,chr5	+,+,-,+,+	HMMR,HMMR,NUDCD2,HMMR,HMMR	-160,-160,-483,-160,-160
chr7:87563149-87563456	chr7	+	87563162	87563380	True	NM_021723,NM_021722,NM_021721,NM_018843,NM_016351,NM_004194	chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,-,+,+	ADAM22,ADAM22,ADAM22,SLC25A40,ADAM22,ADAM22	185,185,185,-57470,185,185
chr6:160552544-160552801	chr6	+	160552748	160552844	True	NM_003058,NM_153187,NM_003057	chr6,chr6,chr6	-,+,+	SLC22A2,SLC22A1,SLC22A1	127169,-9938,-9938
chr19:44260373-44261214	chr19	+	44260399	44260955	True	NM_019108,NM_019612	chr19,chr19	-,+	C19orf61,IRGC	-1257,-40250
chr2:24233359-24233602	chr2	+	24233405	24233553	True	NM_001080473,NM_001142319	chr2,chr2	+,-	MFSD2B,C2orf44	-503,36793
chr5:17217591-17217792	chr5	+	17217738	17217834	True	NR_027253,NM_006317	chr5,chr5	-,+	LOC285696,BASP1	-207,-39
chrX:101905861-101906101	chrX	+	101906014	101906106	True	NM_021992,NM_014710,NM_001184727,NM_001099410,NM_001099411	chrX,chrX,chrX,chrX,chrX	-,+,+,+,+	TMSB15A,GPRASP1,GPRASP1,GPRASP1,GPRASP1	-134315,187,222,187,187
chr17:3497940-3498246	chr17	+	3497942	3498290	True	NM_080705,NM_080706,NM_018727,NM_001031681	chr17,chr17,chr17,chr17	-,-,-,+	TRPV1,TRPV1,TRPV1,CTNS	885,-1771,2096,41471
chrX:69282812-69283203	chrX	+	69282830	69283204	True	NM_001002254,NM_207320	chrX,chrX	-,+	AWAT2,OTUD6A	-13042,-540
chr16:88923967-88924929	chr16	+	88923977	88924927	True	NM_001080487,NM_000512,NM_016209	chr16,chr16,chr16	-,-,+	PABPN1L,GALNS,TRAPPC2L	8191,-603,-522
chr5:60459038-60459737	chr5	+	60459046	60459770	True	NM_001048249,NM_020928	chr5,chr5	-,+	C5orf43,ZSWIM6	-744,168329
chr3:137912143-137913043	chr3	+	137912478	137912882	True	NM_014154,NM_015396,NM_213654,NM_016216	chr3,chr3,chr3,chr3	+,+,+,-	ARMC8,ARMC8,ARMC8,DBR1	-6388,-6388,-6388,-18687
chr17:7310012-7310575	chr17	+	7310103	7310610	True	NM_020795,NR_037719,NM_152766	chr17,chr17,chr17	+,-,-	NLGN2,C17orf61-PLSCR3,C17orf61	891,-2653,-2653
chr2:241833587-241835107	chr2	+	241833654	241835030	True	NM_024861,NM_001085437,NM_000030	chr2,chr2,chr2	-,-,+	C2orf54,C2orf54,AGXT	-2202,593,-25543
chr12:49177073-49177720	chr12	+	49177166	49177442	True	NM_000725,NM_020983,NM_015270	chr12,chr12,chr12	+,-,-	CACNB3,ADCY6,ADCY6	35069,5428,485
chr21:28219163-28220396	chr21	+	28219286	28220272	True	NM_006988,NR_024357	chr21,chr21	-,+	ADAMTS1,NCRNA00113	-1558,874425
chr21:42873255-42873824	chr21	+	42873641	42873835	True	NM_001178046,NM_001135099,NM_005656	chr21,chr21,chr21	+,-,-	MX1,TMPRSS2,TMPRSS2	-75589,6207,6300
chr20:61904999-61906111	chr20	+	61905029	61906163	True	NM_018209,NM_152864,NM_175609	chr20,chr20,chr20	+,-,+	ARFGAP1,NKAIN4,ARFGAP1	-916,-19137,-916
chr5:140474652-140475047	chr5	+	140474679	140475093	True	NM_018936,NM_018937,NM_031947	chr5,chr5,chr5	+,+,-	PCDHB2,PCDHB3,SLC25A2	-493,5140,208569
chr9:131420263-131421094	chr9	+	131420305	131420365	True	NM_001122821,NM_052844	chr9,chr9	+,-	SET,WDR34	25568,-1176
chr11:577479-577803	chr11	+	577492	577738	True	NR_029623,NM_020901,NR_026967	chr11,chr11,chr11	-,+,-	MIR210,PHRF1,LOC143666	-9294,-1060,-1607
chr4:110388404-110390169	chr4	+	110388547	110390179	True	NM_032518,NM_006323	chr4,chr4	-,+	COL25A1,SEC24B	-164748,-33630
chr12:57645337-57647319	chr12	+	57645710	57647214	True	NM_145064,NM_001166357	chr12,chr12	-,+	STAC3,SHMT2	-741,-21618
chr2:158455566-158455978	chr2	+	158455873	158456025	True	NM_014568,NM_001111031	chr2,chr2	+,-	GALNT5,ACVR1C	-341584,-1801
chr22:35559833-35560724	chr22	+	35559847	35560427	True	NM_001003681,NM_005368	chr22,chr22	+,-	HMGXB4,MB	93017,453007
chr1:172720720-172721858	chr1	+	172720813	172721579	True	NM_000639,NM_005092	chr1,chr1	+,-	FASLG,TNFSF18	-92681,298574
chr8:126011142-126011539	chr8	+	126011261	126011533	True	NM_003129,NM_014846	chr8,chr8	+,-	SQLE,KIAA0196	-592,92578
chr1:170965609-170967325	chr1	+	170965834	170967364	True	NM_025063,NR_031627	chr1,chr1	+,-	C1orf129,MIR1295	-61253,103634
chr19:45504126-45504440	chr19	+	45504216	45504476	True	NM_145288,NM_006509	chr19,chr19	-,+	ZNF296,RELB	75262,230
chr15:28822864-28823071	chr15	+	28822893	28823119	True	NR_036443,NR_033351	chr15,chr15	+,-	HERC2P9,GOLGA8F	76468,-44750
chr15:28822864-28823071	chr15	-	28578958	28579026	False	NM_004667,NR_033351	chr15,chr15	-,+	HERC2,GOLGA8F	-11663,44757
chr15:28822864-28823071	chr15	-	20722918	20723144	False	NR_036432,NR_027411	chr15,chr15	-,+	HERC2P3,GOLGA8C	-11485,44529
chr15:28822864-28823071	chr15	-	23389889	23389939	False	NR_036470,NR_002824	chr15,chr15	+,-	HERC2P7,HERC2P2	782,-11630
chr15:28822864-28823071	chr15	-	23677588	23677638	False	NM_005664,NM_019066	chr15,chr15	+,-	MKRN3,MAGEL2	132815,215405
chr2:220377968-220378330	chr2	+	220378204	220378266	True	NM_001195731,NM_018674,NM_182847	chr2,chr2,chr2	-,+,+	CHPF,ACCN4,ACCN4	29603,625,625
chr17:27276015-27276235	chr17	+	27276158	27276276	True	NM_020889,NM_016518,NM_001033561	chr17,chr17,chr17	-,+,-	PHF12,PIPOX,PHF12	2282,93641,2282
chr1:153331706-153333426	chr1	+	153332473	153333232	True	NM_020393,NM_002965	chr1,chr1	-,+	PGLYRP4,S100A9	-11451,-2194
chr22:28697947-28698703	chr22	+	28698157	28698611	True	NM_001145418,NR_036170	chr22,chr22	-,+	TTC28,MIR3199-2	377292,-381697
chr19:57940600-57942330	chr19	+	57940688	57942004	True	NM_020633,NM_001023561	chr19,chr19	-,+	VN1R1,ZNF749	26153,4688
chr12:27931960-27932566	chr12	+	27932090	27932502	True	NM_001146221,NM_020782	chr12,chr12	-,+	LOC100287284,KLHDC5	-7881,684
chr3:42741291-42742067	chr3	+	42741434	42742116	True	NM_152393,NM_020707,NR_027753	chr3,chr3,chr3	+,-,-	KBTBD5,HHATL,HHATL	-14474,2253,947
chr20:47806079-47807655	chr20	+	47806181	47807436	True	NM_017454,NM_017895,NM_017452,NM_017453,NM_004602,NM_001037328	chr20,chr20,chr20,chr20,chr20,chr20	-,+,-,-,-,-	STAU1,DDX27,STAU1,STAU1,STAU1,STAU1	-1277,28395,-1277,-1277,-1277,-1277
chr7:44058985-44059294	chr7	+	44059005	44059341	True	NM_175064,NR_003655	chr7,chr7	+,-	SPDYE1,POLR2J4	-18567,-257
chr7:44058985-44059294	chr7	+	102312352	102312688	False	NM_032959,NM_001166339	chr7,chr7	-,+	POLR2J2,SPDYE2L	-170,-21631
chr7:44058985-44059294	chr7	+	102119622	102119958	False	NM_006234,NM_152892	chr7,chr7	-,+	POLR2J,LRWD1	-241,-14283
chr7:44058985-44059294	chr7	+	102213279	102213615	False	NM_001166339,NM_001097615	chr7,chr7	+,-	SPDYE2L,POLR2J3	-21651,-211
chr19:55237022-55237551	chr19	+	55237041	55237589	True	NM_153443,NM_001127255	chr19,chr19	+,-	KIR3DL3,NLRP7	-1108,221334
chr18:59841168-59842878	chr18	+	59841477	59842779	True	NM_012327,NM_020854	chr18,chr18	-,+	PIGN,KIAA1468	11567,11744
chr15:81617251-81617669	chr15	+	81617311	81617667	True	NM_181900,NM_004513	chr15,chr15	-,+	STARD5,IL16	-787,-28108
chr6:62995874-62996086	chr6	+	62995873	62996135	True	NM_001190706,NM_152688	chr6,chr6	+,-	MTRNR2L9,KHDRBS2	-711916,15
chr7:66367908-66368115	chr7	+	66367968	66368164	True	NR_003934,NM_017994	chr7,chr7	-,+	LOC729156,C7orf42	-58155,18038
chrX:145701192-145701476	chr16	+	89337265	89337315	False	NR_037705,NM_013275	chr16,chr16	+,-	ZNF778,ANKRD11	-53205,219704
chrX:145701192-145701476	chrX	+	145701263	145701381	True	NM_001144064	chrX	+	CXorf51	189920
chr6:150468006-150468474	chr6	+	150468027	150468199	True	NM_030949,NM_024518	chr6,chr6	+,-	PPP1R14C,ULBP3	-3893,-77825
chr1:34629628-34629998	chr1	+	34629679	34629751	True	NM_052896,NM_032884	chr1,chr1	-,+	CSMD2,C1orf94	1742,2872
chr8:17782463-17783149	chr8	+	17782463	17782911	True	NM_006197,NM_201552	chr8,chr8	+,-	PCM1,FGL1	-2152,-29416
chr2:103233952-103235570	chr2	+	103234032	103235475	True	NM_003048,NM_032718	chr2,chr2	+,-	SLC9A2,MFSD9	690,117912
chr1:211849553-211850806	chr1	+	211849862	211850805	True	NR_026761,NM_002497,NM_001204182,NM_001204183	chr1,chr1,chr1,chr1	+,-,-,-	C1orf97,NEK2,NEK2,NEK2	-293817,-890,-890,-890
chr7:149195389-149196168	chr7	+	149195450	149196109	True	NR_036573,NM_001163474,NM_152557	chr7,chr7,chr7	+,-,-	LOC155060,ZNF746,ZNF746	-213136,-552,-552
chr1:20141608-20142560	chr1	+	20141810	20142529	True	NM_015207,NM_019062	chr1,chr1	+,-	OTUD3,RNF186	66358,-39
chr7:79083357-79083585	chr7	+	79083394	79083568	True	NR_031667,NM_012301	chr7,chr7	+,-	MIR548M,MAGI2	317003,-504
chr3:49910585-49910857	chr3	+	49910592	49910820	True	NM_001167582,NM_024046	chr3,chr3	+,-	RBM6,CAMKV	66656,-3223
chr12:55636205-55636869	chr12	+	55636210	55636528	True	NM_001005493,NM_001005490	chr12,chr12	-,+	OR6C6,OR6C74	52538,4543
chr7:77322347-77323955	chr7	+	77322518	77323410	True	NM_032936,NM_198467	chr7,chr7	-,+	TMEM60,RSBN1L	104387,2332
chr3:51976959-51977253	chr3	+	51977086	51977252	True	NM_005485,NM_001003931,NM_004704	chr3,chr3,chr3	+,+,-	PARP3,PARP3,RRP9	-776,-776,-1164
chr13:21279758-21280118	chr13	+	21279856	21280114	True	NM_138284,NM_174928	chr13,chr13	+,-	IL17D,N6AMT2	-2426,67993
chr10:43970161-43970606	chr10	+	43970359	43970585	True	NR_026693,NM_001098204	chr10,chr10	+,-	ZNF487P,HNRNPF	-37843,-65663
chr20:30555240-30555778	chr20	+	30555354	30555630	True	NM_030815,NM_001011718	chr20,chr20	-,+	PDRG1,XKR7	-15471,174
chr19:43245919-43247191	chr19	+	43246810	43246948	True	NR_036584,NM_021016	chr19,chr19	+,-	LOC100289650,PSG3	79066,-2142
chr10:124738950-124739842	chr10	+	124739385	124739761	True	NM_153336,NM_024942	chr10,chr10	+,-	PSTK,C10orf88	19,-25466
chr10:135187878-135188508	chr10	+	135187965	135188402	True	NM_207127,NM_152911,NM_004092,NR_037509,NM_207128	chr10,chr10,chr10,chr10,chr10	+,+,-,-,+	PAOX,PAOX,ECHS1,MIR3944,PAOX	4338,4338,-1057,-2798,4338
chr20:30537176-30537852	chr20	+	30537490	30537812	True	NM_030815,NM_001011718	chr20,chr20	-,+	PDRG1,XKR7	2127,17992
chr11:107426926-107427668	chr11	+	107427051	107427707	True	NM_138775,NM_001130037	chr11,chr11	-,+	ALKBH8,ELMOD1	8804,34109
chr15:57888193-57888779	chr15	+	57888203	57888767	True	NM_152451,NM_001018100,NM_001018091,NM_001018090,NM_170697	chr15,chr15,chr15,chr15,chr15	+,+,+,+,-	GCOM1,GCOM1,GCOM1,GCOM1,ALDH1A2	-4152,-4152,-4152,-4152,417518
chr15:91541376-91542090	chr15	+	91541483	91542107	True	NM_199413,NM_033544,NM_199414,NM_003981	chr15,chr15,chr15,chr15	-,+,-,-	PRC1,RCCD1,PRC1,PRC1	-3679,-43428,-3679,-3679
chr1:186260223-186261203	chr1	+	186260562	186261257	True	NM_003292,NM_005807,NM_001127708,NM_001127709,NM_001127710	chr1,chr1,chr1,chr1,chr1	-,+,+,+,+	TPR,PRG4,PRG4,PRG4,PRG4	83263,4147,4147,4147,4147
chr17:38279430-38279720	chr17	+	38279513	38279641	True	NM_001012241,NM_021724	chr17,chr17	+,-	MSL1,NR1D1	-774,-22540
chrX:10630265-10631517	chrX	+	10630557	10631555	True	NM_001122608,NM_001098624	chrX,chrX	+,-	HCCS,MID1	497850,14283
chr14:62228160-62229004	chr14	+	62228405	62229011	True	NM_001017970,NM_003082	chr14,chr14	-,+	TMEM30B,SNAPC1	-479875,63
chr12:68598082-68598530	chr12	+	68598243	68598565	True	NM_018402,NM_001010942	chr12,chr12	-,+	IL26,RAP1B	21056,406086
chr8:181888-182099	chr6	+	170921469	170921703	False	NM_001172085,NM_001199461	chr6,chr6	+,-	TBP,PDCD2	-58099,-27689
chr8:181888-182099	chr1	-	763135	763369	False	NR_024321,NR_015368	chr1,chr1	-,+	NCRNA00115,LOC643837	-233,-122
chr8:181888-182099	chr8	+	181914	182148	True	NM_001042416,NM_001042415,NR_003572,NM_173539	chr8,chr8,chr8,chr8	+,+,-,+	ZNF596,ZNF596,RPL23AP53,ZNF596	235,235,220,51
chr6:37225071-37225443	chr6	+	37225088	37225484	True	NM_145316,NM_017772,NM_001162900	chr6,chr6,chr6	-,+,-	TMEM217,TBC1D22B,TMEM217	-21,63,497
chr2:165654112-165655384	chr2	+	165654113	165655134	True	NM_001040142,NM_014900	chr2,chr2	+,-	SCN2A,COBLL1	440777,42844
chr11:60148348-60148863	chr11	+	60148354	60148898	True	NM_021201,NM_206939,NM_206938,NM_206940,NM_022349	chr11,chr11,chr11,chr11,chr11	+,+,+,+,-	MS4A7,MS4A7,MS4A7,MS4A7,MS4A6A	-2447,-2447,-2447,-2447,-197680
chr21:44749405-44749899	chr21	+	44749413	44749767	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	120136,97285
chr11:46958499-46958948	chr11	+	46958619	46958971	True	NM_024113,NM_001003677,NM_001003676,NM_001003678,NM_002334	chr11,chr11,chr11,chr11,chr11	+,+,+,+,-	C11orf49,C11orf49,C11orf49,C11orf49,LRP4	-419,-419,-419,-419,-18446
chr2:229460953-229462550	chr2	+	229461428	229462502	True	NM_178821,NM_030623	chr2,chr2	+,-	WDR69,SPHKAP	-725165,-415067
chr7:64839102-64840586	chr7	+	64839177	64840307	True	NM_152626,NM_001007253,NM_007139	chr7,chr7,chr7	+,-,+	ZNF92,ERV3,ZNF92	-460,-372053,-460
chr1:4053884-4054576	chr1	+	4053924	4054612	True	NR_024455,NM_207356	chr1,chr1	+,-	LOC100133612,C1orf174	-237014,-237067
chr16:11833369-11834872	chr16	+	11833412	11834635	True	NM_003498,NM_015914	chr16,chr16	+,-	SNN,TXNDC11	-71174,2063
chr10:7708314-7708552	chr10	+	7708351	7708522	True	NM_002216,NM_001001851,NM_030569	chr10,chr10,chr10	+,-,-	ITIH2,ITIH5,ITIH5	36713,490,490
chr15:40886104-40886472	chr15	+	40886150	40886457	True	NM_144508,NM_052849,NM_170589	chr15,chr15,chr15	+,-,+	CASC5,C15orf57,CASC5	-11,-28898,-11
chr1:21834966-21835215	chr1	+	21834965	21835251	True	NM_001177520,NM_001145658,NM_000478,NM_001127501	chr1,chr1,chr1,chr1	+,-,+,+	ALPL,RAP1GAP,ALPL,ALPL	606,143147,606,606
chr6:160390872-160391123	chr6	+	160390879	160391127	True	NM_000876,NM_030752	chr6,chr6	+,-	IGF2R,TCP1	-799,-180144
chr12:1795956-1796343	chr12	+	1796037	1796192	True	NM_024551,NR_037422	chr12,chr12	+,-	ADIPOR2,MIR3649	4054,-26491
chr11:6280334-6281075	chr11	+	6280371	6280859	True	NM_176875,NM_032127	chr11,chr11	+,-	CCKBR,FAM160A2	106,-24430
chr8:7707713-7708438	chr8	+	7707763	7708447	True	NM_152250,NM_001081552,NM_058203	chr8,chr8,chr8	-,+,+	DEFB105A,SPAG11A,SPAG11B	-26403,-2412,-2412
chr8:7707713-7708438	chr8	-	7318146	7318830	False	NM_001040703,NM_016512,NM_058206,NM_058207,NM_058200,NM_058201,NM_058202,NM_058203	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	+,-,-,-,-,-,-,-	DEFB105B,SPAG11B,SPAG11B,SPAG11B,SPAG11B,SPAG11B,SPAG11B,SPAG11B	26412,2412,-8259,-8259,2412,2412,2412,2412
chr16:23848165-23848657	chr16	+	23848335	23848655	True	NM_212535,NM_033266,NM_002738	chr16,chr16,chr16	+,-,+	PRKCB,ERN2,PRKCB	-1086,-123514,-1086
chr16:55858572-55860061	chr16	+	55858640	55859920	True	NR_003276,NM_001025194,NM_001025195,NM_001266	chr16,chr16,chr16,chr16	+,-,-,-	CES1P1,CES1,CES1,CES1	-64180,7205,7205,7205
chr7:73498979-73499583	chr7	+	73498986	73499600	True	NM_002314,NM_001204426,NM_002914	chr7,chr7,chr7	+,+,-	LIMK1,LIMK1,RFC2	-930,7885,169188
chr1:3766440-3767817	chr1	+	3766541	3767542	True	NM_004402,NM_014704	chr1,chr1	+,-	DFFB,KIAA0562	6302,6305
chr17:74598942-74600937	chr17	+	74598947	74600742	True	NM_006456,NR_004395	chr17,chr17	-,+	ST6GALNAC2,SNORD1A	-16802,-41283
chr19:50262580-50263668	chr19	+	50262985	50263554	True	NM_130787,NM_014203,NM_021733	chr19,chr19,chr19	+,+,-	AP2A1,AP2A1,TSKS	6625,6625,3013
chr11:66312803-66313108	chr11	+	66312840	66313132	True	NM_001104,NM_207340	chr11,chr11	+,-	ACTN3,ZDHHC24	1258,589
chr3:180042925-180043514	chr3	+	180042990	180043473	True	NM_001042601,NM_016559	chr3,chr3	+,-	TTC14,PEX5L	276444,-288473
chr14:92787239-92788578	chr14	+	92787242	92788401	True	NM_153648,NM_004545,NM_153646,NM_153647	chr14,chr14,chr14,chr14	+,-,+,+	SLC24A4,NDUFB1,SLC24A4,SLC24A4	523,-199089,1750,1135
chr22:31005510-31006549	chr22	+	31005787	31006523	True	NR_036550,NM_000355,NM_001184726	chr22,chr22,chr22	-,+,+	PES1,TCN2,TCN2	-2787,-2769,-2769
chrY:14770011-14771282	chrY	+	14770275	14771127	True	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	3170,-236886
chr11:3689665-3689946	chr11	+	3689774	3689962	True	NM_004314,NM_020402	chr11,chr11	+,-	ART1,CHRNA10	-23472,2702
chr9:37033740-37033943	chr9	+	37033778	37033988	True	NM_016734,NR_036592	chr9,chr9	-,+	PAX5,LOC100506710	538,45904
chrX:134558573-134559532	chrX	+	134558654	134559554	True	NR_024359,NM_007131	chrX,chrX	+,-	NCRNA00086,ZNF75D	-2837,-128689
chr1:25774877-25776432	chr1	+	25775036	25776172	True	NM_018202,NM_138618	chr1,chr1	+,-	TMEM57,RHCE	-17710,-27673
chr1:761296-762295	chr1	+	761343	762318	True	NR_024321,NR_015368	chr1,chr1	-,+	NCRNA00115,LOC643837	634,745
chr17:57969622-57969894	chr17	+	57969788	57969914	True	NM_001193611,NM_001193610,NM_001193613,NM_001193612,NM_001193609,NM_016261,NM_003161	chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,-,+	TUBD1,TUBD1,TUBD1,TUBD1,TUBD1,TUBD1,RPS6KB1	448,448,448,448,448,448,528
chr9:4298857-4299246	chr9	+	4298878	4299286	True	NM_001042413,NM_004170	chr9,chr9	-,+	GLIS3,SLC1A1	799,191140
chrX:8767021-8767439	chrX	+	8767109	8767221	True	NM_174951,NM_001001888,NM_001171186	chrX,chrX,chrX	-,+,-	FAM9A,VCX3B,FAM9A	2253,-334289,2207
chrX:8767021-8767439	chrX	+	8768224	8768336	False	NM_174951,NM_001001888,NM_001171186	chrX,chrX,chrX	-,+,-	FAM9A,VCX3B,FAM9A	1138,-335404,1092
chr17:28705167-28705784	chr17	+	28705274	28705734	True	NM_206832,NM_001199775,NM_001304	chr17,chr17,chr17	-,+,+	TMIGD1,CPD,CPD	-44209,1761,207
chr18:72054337-72056036	chr18	+	72054551	72055846	True	NM_001044369,NM_001174123	chr18,chr18	-,+	FAM69C,DKFZP781G0119	68708,-71492
chr14:71067868-71069271	chr14	+	71067935	71069307	True	NM_015351,NM_005466	chr14,chr14	+,-	TTC9,MED6	39196,-551
chr3:186281640-186281989	chr3	+	186281835	186282037	True	NM_016306,NM_001134415,NM_018138	chr3,chr3,chr3	+,-,-	DNAJB11,TBCCD1,TBCCD1	6429,6345,3154
chr17:62915845-62916469	chr17_ctg5_hap1	+	494163	494248	False	NM_001193465,NM_014834	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	KIAA1267,LRRC37A	69249,-35559
chr17:62915845-62916469	chr17_ctg5_hap1	-	1234313	1234398	False	NR_026901,NR_037772	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LOC644172,CRHR1	-45930,-63860
chr17:62915845-62916469	chr17	+	62916268	62916353	True	NM_199340,NM_001165933	chr17,chr17	-,+	LRRC37A3,RGS9	-1365,217102
chr11:133828254-133828650	chr11	+	133828311	133828701	True	NM_014987,NR_027276	chr11,chr11	-,+	IGSF9B,LOC100128239	-1431,73465
chr1:19987506-19987781	chr1	+	19987545	19987676	True	NM_181719,NM_000871	chr1,chr1	-,+	TMCO4,HTR6	138785,4103
chr19:6331524-6332271	chr19	+	6331822	6331981	True	NM_006012,NM_133492	chr19,chr19	+,-	CLPP,ACER1	29481,1720
chr1:205326138-205326639	chr1	+	205326206	205326644	True	NM_014858,NM_018203	chr1,chr1	+,-	TMCC2,KLHDC8A	-129219,-167
chr9:32054928-32055280	chr9	+	32054960	32055303	True	NM_014314,NM_002197	chr9,chr9	-,+	DDX58,ACO1	471078,329297
chr14:70249148-70249379	chr14	+	70249154	70249252	True	NR_029378,NM_006925	chr14,chr14	-,+	LOC100289511,SRSF5	-14724,-15378
chrX:67867695-67868987	chrX	+	67867849	67868947	True	NM_014725,NM_002547,NM_001142503	chrX,chrX,chrX	+,-,+	STARD8,OPHN1,STARD8	-389,-214550,-389
chr10:104406517-104407400	chr10	+	104406724	104407440	True	NM_030912,NM_004311	chr10,chr10	+,-	TRIM8,ARL3	-2529,66800
chr14:89240385-89241457	chr14	+	89240501	89241489	True	NM_183387,NM_144596	chr14,chr14	-,+	EML5,TTC8	17657,49488
chr5:79595162-79596075	chr5	+	79595352	79596102	True	NM_032567,NR_004845	chr5,chr5	+,-	SPZ1,LOC644936	19687,245
chr5:36246617-36247912	chr5	+	36246747	36247544	True	NM_001085411,NM_153013,NM_032637	chr5,chr5,chr5	-,-,+	C5orf33,C5orf33,SKP2	-4847,-4489,-94609
chr13:97869066-97870380	chr13	+	97869455	97870387	True	NM_144778,NM_080818,NM_207304	chr13,chr13,chr13	+,-,+	MBNL2,OXGR1,MBNL2	4186,-222851,4186
chr10:131761021-131761486	chr10	+	131761198	131761410	True	NM_001005463,NM_006541	chr10,chr10	-,+	EBF3,GLRX3	731,173228
chr12:69345536-69345800	chr12	+	69345552	69345848	True	NM_001874,NM_002392	chr12,chr12	-,+	CPM,MDM2	11222,-143632
chr10:27521202-27522501	chr10	+	27521544	27522037	True	NM_032844,NR_024150,NM_145698,NM_001042473	chr10,chr10,chr10,chr10	+,-,-,-	MASTL,ACBD5,ACBD5,ACBD5	-77850,9081,7821,9081
chr5:180351799-180353363	chr5	+	180351798	180352804	True	NM_001159710,NM_152283	chr5,chr5	+,-	BTNL8,ZFP62	-15294,-63512
chr7:3083823-3084038	chr7	+	3083859	3083945	True	NM_032415,NM_152744	chr7,chr7	-,+	CARD11,SDK1	-350,257134
chr12:72233491-72233693	chr12	+	72233491	72233723	True	NR_027449,NM_022771,NM_001146214,NM_001146213,NR_024072	chr12,chr12,chr12,chr12,chr12	+,+,+,+,-	TBC1D15,TBC1D15,TBC1D15,TBC1D15,MRS2P2	-55,-55,-55,-55,11090
chrX:48330591-48331353	chrX	+	48330646	48331393	True	NM_012280,NM_033518,NM_177439,NM_177434	chrX,chrX,chrX,chrX	+,-,+,+	FTSJ1,SLC38A5,FTSJ1,FTSJ1	3155,-2002,3155,4986
chr1:43642642-43643771	chr1	+	43642701	43643711	True	NM_001159936,NM_001167965,NM_001167966,NR_030778,NM_152498,NM_006824	chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,+,+,-	EBNA1BP2,WDR65,WDR65,WDR65,WDR65,EBNA1BP2	-4460,-4751,-4737,-4751,-4751,-4715
chr11:8103164-8104763	chr11	+	8103518	8104548	True	NM_177972,NM_001135109	chr11,chr11	+,-	TUB,RIC3	-660,86092
chrX:135962389-135962754	chrX	+	135962399	135962761	True	NM_001164803,NR_002735,NM_002139,NM_000074,NR_028477,NR_028476	chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,+,-,-	RBMX,SNORD61,RBMX,CD40LG,RBMX,RBMX	228,-969,228,-232114,228,228
chr18:9335255-9336110	chr18	+	9335318	9335731	True	NM_020648,NM_001042388	chr18,chr18	+,-	TWSG1,PPP4R1	-605,278920
chr22:44256011-44256761	chr22	+	44256016	44256741	True	NM_025225,NM_014351	chr22,chr22	+,-	PNPLA3,SULT4A1	62877,1687
chr9:35658770-35660000	chr9	+	35658904	35659683	True	NM_032818,NM_014450,NR_003051,NM_001195200,NM_001195201,NM_001195217,NM_174923	chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,-,-,+,+,+,+	C9orf100,SIT1,RMRP,CCDC107,CCDC107,CCDC107,CCDC107	5652,-7957,-889,-668,-668,-668,-668
chr9:5897769-5898201	chr9	+	5897771	5897964	True	NM_024896,NM_005511	chr9,chr9	-,+	ERMP1,MLANA	-64690,-6913
chr1:46590489-46591523	chr1	+	46590844	46591429	True	NM_003629,NM_005727,NM_001114172	chr1,chr1,chr1	-,+,-	PIK3R3,TSPAN1,PIK3R3	7010,49319,7338
chr8:1714181-1714443	chr8	+	1714185	1714473	True	NR_033895,NM_018941	chr8,chr8	-,+	LOC286083,CLN8	-463358,-2366
chr22:37393772-37394291	chr22	+	37393781	37394278	True	NM_001013436,NM_178552,NM_001163857	chr22,chr22,chr22	+,-,-	MPST,C22orf33,C22orf33	21423,9656,9656
chr19:37328315-37329135	chr19	+	37328458	37328948	True	NM_003419,NM_206894	chr19,chr19	+,-	ZNF345,ZNF790	12318,386
chr8:47528715-47528916	chr8	+	47528724	47528958	True	NR_027013,NM_005195	chr8,chr8	+,-	NCRNA00293,CEBPD	223549,1121818
chr12:123377317-123378958	chr12	+	123377785	123378976	True	NM_003959,NM_024667	chr12,chr12	+,-	HIP1R,VPS37B	-57797,1786
chr2:241836075-241836550	chr2	+	241836215	241836455	True	NM_024861,NM_001085437,NM_000030	chr2,chr2,chr2	-,-,+	C2orf54,C2orf54,AGXT	-4763,-642,-28104
chr11:117693197-117693688	chr11	+	117693205	117693737	True	NM_001680,NM_001558,NM_021603	chr11,chr11,chr11	-,+,-	FXYD2,IL10RA,FXYD2	1772,163368,5120
chr8:68864557-68864780	chr8	+	68864626	68864778	True	NM_024870,NM_020361,NM_025170	chr8,chr8,chr8	+,-,+	PREX2,CPA6,PREX2	-74,-206006,-74
chr14:70268180-70269476	chr14	+	70268221	70269500	True	NM_003049,NM_006925	chr14,chr14	-,+	SLC10A1,SRSF5	-4215,-34438
chr1:19599540-19600127	chr1	+	19599682	19600170	True	NM_001145289,NM_201252,NM_016183	chr1,chr1,chr1	-,-,+	AKR7L,AKR7L,MRTO4	448,448,-21658
chr1:6675718-6676130	chr1	+	6675726	6675950	True	NM_014851,NM_138350,NM_001195752,NM_153812,NM_001195753	chr1,chr1,chr1,chr1,chr1	-,+,+,+,+	KLHL21,THAP3,THAP3,PHF13,THAP3	-12797,9259,9259,-2028,8974
chr5:60138179-60139129	chr5	+	60138181	60139051	True	NM_001104558,NM_024930,NM_174889	chr5,chr5,chr5	-,-,+	ELOVL7,ELOVL7,NDUFAF2	1100,1100,101904
chr9:118921592-118922501	chr9	+	118921598	118922490	True	NM_002581,NR_024032	chr9,chr9	+,-	PAPPA,C9orf27	-5580,-234221
chr6:43141699-43141952	chr6	+	43141699	43141975	True	NM_006443,NM_003131,NM_015089	chr6,chr6,chr6	-,+,+	C6orf108,SRF,CUL9	55286,-2830,7946
chr4:120131942-120133651	chr4	+	120132392	120133449	True	NM_001001701,NM_019050	chr4,chr4	-,+	C4orf3,USP53	88569,332
chr6:46917936-46918342	chr6	+	46917940	46918080	True	NM_005588,NM_015234	chr6,chr6	+,-	MEP1A,GPR116	-156897,4645
chr6:36957567-36957916	chr6	+	36957684	36957744	True	NM_014341,NM_173558	chr6,chr6	-,+	MTCH1,FGD2	-3735,15678
chr9:73442632-73442925	chr9	+	73442674	73442954	True	NR_029621,NM_015110	chr9,chr9	-,+	MIR204,SMC5	-17674,-568859
chr20:62711856-62712122	chr20	+	62711896	62712046	True	NM_182647,NM_001007125,NM_001039467,NM_001200019,NM_000913,NM_005873	chr20,chr20,chr20,chr20,chr20,chr20	+,-,-,+,+,-	OPRL1,C20orf201,RGS19,OPRL1,OPRL1,RGS19	-476,3716,-572,4322,-476,-1051
chr21:45958664-45959192	chr21	+	45958754	45958890	True	NR_026548,NM_198691	chr21,chr21	+,-	C21orf90,KRTAP10-1	-21710,1238
chr11:19264751-19265945	chr11	+	19264822	19265890	True	NM_001111018,NM_024680	chr11,chr11	+,-	NAV2,E2F8	106380,-2315
chr12:27921137-27921902	chr12	+	27921438	27921950	True	NM_001146221,NM_020782	chr12,chr12	-,+	LOC100287284,KLHDC5	2309,11236
chr17:39869298-39870516	chr17	+	39869515	39870399	True	NM_001079870,NM_000805	chr17,chr17	-,+	HAP1,GAST	20549,-953
chr2:74663881-74664085	chr2	+	74663893	74664100	True	NM_032118,NM_033046,NM_001015056,NM_001015055	chr2,chr2,chr2,chr2	+,-,-,-	WDR54,RTKN,RTKN,RTKN	-15059,3660,3660,5010
chr1:203697907-203698394	chr1	+	203698273	203698356	True	NR_027902,NR_003019	chr1,chr1	-,+	C1orf157,SNORA77	312095,352
chr12:95946650-95947245	chr12	+	95946852	95946990	True	NM_032147,NM_006838,NM_001042403	chr12,chr12,chr12	-,+,-	USP44,METAP2,USP44	-1589,-79081,-4232
chr7:129009551-129010257	chr7	+	129009716	129010182	True	NM_001130722,NM_001130723,NR_034053	chr7,chr7,chr7	+,+,-	AHCYL2,AHCYL2,TNPO3	5301,-1809,-314489
chr22:31518539-31518940	chr22	+	31518621	31518961	True	NM_080430,NM_001002837	chr22,chr22	-,+	SELM,INPP5J	-15070,-1
chr17:32577771-32579346	chr17	+	32577930	32579332	True	NM_002982,NM_001094	chr17,chr17	+,-	CCL2,ACCN1	2963,-94105
chr1:9296651-9297039	chr1	+	9296783	9297002	True	NM_004285,NR_029610	chr1,chr1	+,-	H6PD,MIR34A	-1974,-84947
chr19:52256464-52257567	chr19	+	52257114	52257601	True	NM_002029,NM_001462,NM_001193306,NM_001005738	chr19,chr19,chr19,chr19	-,+,-,+	FPR1,FPR2,FPR1,FPR2	-1964,9040,-1964,6851
chr16:68875917-68876163	chr16	+	68876105	68876181	True	NM_001040146,NM_024562	chr16,chr16	-,+	CHTF8,TMCO7	289931,1327
chr1:54202168-54203421	chr1	+	54202173	54203348	True	NM_147193,NM_000792	chr1,chr1	-,+	GLIS1,DIO1	-2296,156512
chr18:52615076-52616520	chr18	+	52615171	52616565	True	NM_004163,NM_001143829	chr18,chr18	+,-	RAB27B,CCDC68	-119385,8764
chr8:146013715-146015221	chr8	+	146013858	146015064	True	NM_000973,NM_033301,NM_030580,NM_213605	chr8,chr8,chr8,chr8	-,-,-,+	RPL8,RPL8,ZNF34,ZNF517	2791,2715,-1133,9196
chr9:127022973-127023783	chr9	+	127023034	127023754	True	NM_002799,NM_014397,NM_001145001,NM_001166168,NM_001166167	chr9,chr9,chr9,chr9,chr9	-,+,+,+,+	PSMB7,NEK6,NEK6,NEK6,NEK6	154017,-2889,-2889,-2555,-3200
chr17:6773600-6775453	chr17	+	6773735	6774937	True	NM_053285,NR_002710	chr17,chr17	-,+	TEKT1,ALOX12P2	-38675,-16905
chr5:115418208-115419952	chr5	+	115418487	115419961	True	NM_016144,NR_033363	chr5,chr5	+,-	COMMD10,ATG12	765,-240939
chr1:1509360-1509601	chr1	+	1509452	1509522	True	NM_001170686,NM_014188	chr1,chr1	+,-	MIB2,SSU72	41272,790
chr17:59487161-59487526	chr17	+	59487161	59487457	True	NM_199290,NM_005994,NM_203425	chr17,chr17,chr17	-,+,+	NACA2,TBX2,C17orf82	181158,-9955,1654
chrX:70125095-70125757	chrX	+	70125187	70125471	True	NM_001003811,NM_001170931,NM_031276	chrX,chrX,chrX	-,+,-	TEX11,FOXO4,TEX11	3152,190527,3152
chr6:46889469-46889733	chr6	+	46889472	46889782	True	NM_001098518,NM_005588	chr6,chr6	-,+	GPR116,MEP1A	-18,-128429
chr15:80182290-80182728	chr15	+	80182289	80182538	True	NM_006441,NM_001199758,NR_028330,NR_037654	chr15,chr15,chr15,chr15	-,-,+,-	MTHFS,MTHFS,C15orf37,MTHFS	6904,7140,32574,6852
chr21:38829625-38830894	chr21	+	38830264	38830913	True	NM_006052,NM_001396	chr21,chr21	-,+	DSCR3,DYRK1A	-190431,-37713
chr15:43423022-43423885	chr15	+	43423162	43423878	True	NM_024956,NM_174916	chr15,chr15	+,-	TMEM62,UBR1	1843,-24876
chr6:167739616-167741550	chr6	+	167739663	167741565	True	NM_004610,NM_031949	chr6,chr6	-,+	TCP10,TTLL2	56483,-1140
chr1:213087153-213088913	chr1	+	213088072	213088950	True	NM_001136474,NR_027286	chr1,chr1	+,-	VASH2,NCRNA00292	34936,-56592
chr2:70997846-70998164	chr2	+	70997864	70998090	True	NM_017482,NM_001617,NM_017488,NM_001185054,NM_001185055,NM_012476	chr2,chr2,chr2,chr2,chr2,chr2	-,-,-,-,-,+	ADD2,ADD2,ADD2,ADD2,ADD2,VAX2	-2489,-2489,-2489,-3017,-2489,129629
chr7:1021592-1021909	chr7	+	1021680	1021846	True	NM_017781,NM_001031617	chr7,chr7	+,-	CYP2W1,COX19	988,-6445
chr19:49176912-49177502	chr19	+	49176960	49177474	True	NM_000511,NM_145807	chr19,chr19	+,-	FUT2,NTN5	21753,-696
chr8:38458368-38458720	chr6	-	32147323	32147467	True	NM_172197,NR_003129,NM_006411,NM_032741,NM_001136,NM_006913	chr6,chr6,chr6,chr6,chr6,chr6	-,+,-,-,-,+	AGER,RNF5P1,AGPAT1,AGPAT1,AGER,RNF5	4700,-1236,-3407,-1435,4700,-1306
chr16:70474879-70475984	chr16	+	70474884	70475772	True	NM_145059,NM_006927	chr16,chr16	+,-	FUK,ST3GAL2	12725,-1893
chr4:36312539-36312749	chr4	+	36312584	36312742	True	NM_001170700,NM_015230	chr4,chr4	+,-	DTHD1,ARAP2	-26991,-66605
chr5:147763652-147763929	chr5	+	147763866	147763978	True	NM_205836,NM_030793,NM_001040169	chr5,chr5,chr5	+,+,-	FBXO38,FBXO38,HTR4	-371,-371,252696
chr22:19165443-19165652	chr22	+	19165469	19165701	True	NM_053006,NR_033687,NM_005984	chr22,chr22,chr22	+,-,-	TSSK2,SLC25A1,SLC25A1	-47199,383,650
chrX:71404916-71405827	chrX	+	71405021	71405869	True	NR_033187,NM_001170747,NM_017669,NM_006223,NM_001024455	chrX,chrX,chrX,chrX,chrX	+,+,-,+,-	PIN4,PIN4,ERCC6L,PIN4,RGAG4	-3546,-3546,53039,-3546,-53270
chr1:100626339-100627925	chr1	+	100626502	100627938	True	NM_144620,NM_019083	chr1,chr1	-,+	LRRC39,CCDC76	15884,-27852
chr7:30543609-30543945	chr7	+	30543640	30543946	True	NR_037669,NM_001199815,NM_001199817,NM_001199816,NM_024051,NM_002047	chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,+	GGCT,GGCT,GGCT,GGCT,GGCT,GARS	561,561,561,561,561,90234
chr1:68517203-68518130	chr1	+	68517212	68518094	True	NM_004675,NM_001924	chr1,chr1	-,+	DIRAS3,GADD45A	-752,-366403
chr17:17990803-17991107	chr17	+	17990925	17991061	True	NM_145691,NM_001388	chr17,chr17	-,+	ATPAF2,DRG2	-48445,221
chr22:24987546-24988210	chr22	+	24987559	24988237	True	NM_013430,NM_207644	chr22,chr22	+,-	GGT1,C22orf36	-7892,848
chr17:6880637-6881512	chr17	+	6880678	6881359	True	NM_000697,NR_029712	chr17,chr17	+,-	ALOX12,MIR195	18024,39722
chr12:50296974-50297264	chr12	+	50296993	50297181	True	NM_000486,NM_012306,NR_026948	chr12,chr12,chr12	+,-,-	AQP2,FAIM2,LOC283332	47342,629,8515
chr6:89822953-89823408	chr6	+	89823312	89823378	True	NM_001010853,NM_080743	chr6,chr6	+,-	PM20D2,SRSF12	32390,4474
chr3:196261544-196261931	chr3	+	196261661	196261805	True	NM_001105573,NM_001077657	chr3,chr3	+,-	FBXO45,C3orf43	33919,-19424
chrX:36093435-36094468	chrX	+	36093744	36094287	True	NM_173695,NM_031442	chrX,chrX	+,-	CXorf59,TMEM47	-28748,-1418339
chr3:119301117-119301324	chr3	+	119301142	119301302	True	NM_005191,NM_001125	chr3,chr3	-,+	CD80,ADPRH	-22661,-2670
chr6:150388718-150389778	chr6	+	150388861	150389765	True	NM_030949,NM_024518	chr6,chr6	+,-	PPP1R14C,ULBP3	74422,487
chr2:236404100-236404316	chr2	+	236404134	236404304	True	NM_014914,NM_001037131,NM_001485	chr2,chr2,chr2	+,+,-	AGAP1,AGAP1,GBX2	-1449,-1449,672398
chr7:99142921-99144712	chr7	+	99143049	99144638	True	NM_145111,NM_001085366	chr7,chr7	-,+	FAM200A,ZNF655	5183,11406
chr20:17509114-17509840	chr20	+	17509151	17509559	True	NM_001011546,NM_001195	chr20,chr20	+,-	DSTN,BFSP1	41039,2504
chr21:40758434-40760020	chr21	+	40758689	40759785	True	NM_004627,NM_004965,NM_001146218	chr21,chr21,chr21	+,-,+	WRB,HMGN1,WRB	-6538,-37642,6
chr18:28933855-28934950	chr18	+	28934258	28934978	True	NM_024421,NM_001134453	chr18,chr18	-,+	DSC1,DSG4	-191439,21761
chr5:156538042-156539144	chr5	+	156538172	156538857	True	NM_005546,NM_032782	chr5,chr5	+,-	ITK,HAVCR2	69049,-2034
chr11:128772553-128772755	chr11	+	128772567	128772799	True	NM_000890,NM_145013	chr11,chr11	+,-	KCNJ5,C11orf45	-11305,2843
chr6:14963370-14964196	chr6	+	14963394	14964163	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	282363,699177
chrX:133780301-133780898	chrX	+	133780365	133780915	True	NM_021796,NM_001170780	chrX,chrX	-,+	PLAC1,FAM122C	11648,149527
chr9:88874202-88874798	chr9	+	88874270	88874672	True	NM_024635,NM_001010907	chr9,chr9	+,-	NAA35,C9orf153	-318270,49
chr12:123595739-123596304	chr12	+	123595759	123596087	True	NM_020845,NM_152269	chr12,chr12	-,+	PITPNM2,C12orf65	-784,121756
chr21:11097403-11098000	chr21	+	11097528	11097712	True	NR_037458,NM_181704,NM_001187,NM_182482,NM_182481,NM_182484	chr21,chr21,chr21,chr21,chr21,chr21	+,-,-,-,-,-	MIR3687,BAGE4,BAGE,BAGE2,BAGE3,BAGE5	-1271376,1263,1275,1263,1263,1263
chr19:49827977-49828224	chr19	+	49828031	49828111	True	NM_001040031,NM_014037	chr19,chr19	+,-	CD37,SLC6A16	10565,413
chr15:59226507-59227241	chr15	+	59226507	59227165	True	NM_001013843,NM_024755,NM_017610	chr15,chr15,chr15	-,-,+	SLTM,SLTM,RNF111	-655,-655,52699
chr2:119606693-119607069	chr2	+	119606692	119607042	True	NM_001426,NM_006770	chr2,chr2	-,+	EN1,MARCO	-933,92702
chr17:10405192-10406722	chr17	+	10405412	10406296	True	NM_005963,NM_020233	chr17,chr17	-,+	MYH1,C17orf48	15613,194630
chr9:79115874-79117869	chr9	+	79115919	79117798	True	NM_018339,NM_001097636	chr9,chr9	-,+	RFK,GCNT1	-106475,-428
chr20:3663745-3664787	chr20	+	3664112	3664422	True	NM_153202,NM_001197327,NM_025220	chr20,chr20,chr20	-,+,-	ADAM33,HSPA12B,ADAM33	-1374,48894,-1374
chr6:27861724-27862014	chr6	+	27861753	27861843	True	NM_003514,NM_003527,NM_003535	chr6,chr6,chr6	-,+,-	HIST1H2AM,HIST1H2BO,HIST1H3J	-790,-601,-3183
chr11:58000435-58002181	chr11	+	58001129	58002089	True	NM_001004471,NM_001004458	chr11,chr11	-,+	OR10Q1,OR1S1	-4739,-18972
chr1:218520460-218520839	chr1	+	218520465	218520816	True	NM_003238,NM_018040,NM_001135599	chr1,chr1,chr1	+,-,+	TGFB2,GPATCH2,TGFB2	-1840,-716056,-1840
chr5:137549860-137550319	chr5	+	137550058	137550163	True	NM_005733,NM_004661	chr5,chr5	+,-	KIF20A,CDC23	-35701,-1026
chr19:11997488-11998669	chr19	+	11997504	11998474	True	NM_021915,NM_001080411,NM_001080493	chr19,chr19,chr19	+,-,-	ZNF69,ZNF433,ZNF823	195,148101,-147744
chr9:132584094-132584435	chr9	+	132584185	132584269	True	NM_001110303,NM_000113	chr9,chr9	+,-	USP20,TOR1A	13426,2222
chr17:31324002-31324291	chr17	+	31324049	31324337	True	NM_173847,NM_015194	chr17,chr17	+,-	SPACA3,MYO1D	-5218,-120147
chr19:16189688-16190600	chr19	+	16189708	16190368	True	NM_003290,NM_054113	chr19,chr19	+,-	TPM4,CIB3	-2624,93968
chr8:143918216-143919820	chr8	+	143918265	143919831	True	NM_002066,NM_000497	chr8,chr8	+,-	GML,CYP11B1	-2102,41455
chr8:143918216-143919820	chr8	-	143914144	143914201	False	NM_002066,NM_003695	chr8,chr8	+,-	GML,LY6D	2015,-46136
chr1:12777796-12778629	chr1	+	12777963	12778498	True	NM_004753,NM_001103169,NM_001103170	chr1,chr1,chr1	-,+,+	DHRS3,AADACL3,AADACL3	-100143,-1896,-1896
chr20:1874525-1874788	chr20	+	1874669	1874736	True	NM_080792,NM_001190892,NM_001040023,NM_001040022	chr20,chr20,chr20,chr20	+,-,+,+	SIRPA,PDYN,SIRPA,SIRPA	688,98767,1089,76
chrX:101380867-101381137	chrX	+	101381065	101381125	True	NM_001006938,NM_080390	chrX,chrX	-,+	TCEAL6,TCEAL2	16313,-456
chr5:40833337-40834031	chr5	+	40833447	40833924	True	NM_032587,NR_002583,NR_037665,NM_000997	chr5,chr5,chr5,chr5	+,-,-,-	CARD6,SNORD72,LOC100506548,RPL37	7485,-610,-4203,1520
chr15:43804454-43804835	chr15	+	43804456	43804807	True	NM_002373,NM_005657	chr15,chr15	+,-	MAP1A,TP53BP1	4998,-1749
chr15:52821240-52821457	chr15	+	52821329	52821445	True	NM_001142495,NM_002748,NM_000259	chr15,chr15,chr15	-,+,-	MYO5A,MAPK6,MYO5A	-82,-509969,-82
chr3:133384508-133385308	chr3	+	133384812	133385365	True	NM_001063,NM_007027	chr3,chr3	+,-	TF,TOPBP1	79611,-4075
chr10:124909709-124910215	chr10	+	124909798	124910244	True	NM_001007793,NM_004725,NM_022466,NM_005519	chr10,chr10,chr10,chr10	+,+,-,+	BUB3,BUB3,IKZF5,HMX2	3515,3515,-141487,-2214
chr19:42133455-42134126	chr19	+	42133562	42134168	True	NM_033543,NM_001817	chr19,chr19	+,-	CEACAM21,CEACAM4	-51084,-120
chr3:141495398-141496257	chr3	+	141495453	141496159	True	NM_001178140,NM_139209	chr3,chr3	-,+	TFDP2,GRK7	223121,883
chr1:151739331-151740700	chr1	+	151739330	151740715	True	NM_016178,NM_001134939,NM_031420	chr1,chr1,chr1	+,+,-	OAZ3,OAZ3,MRPL9	-257,-3943,-3290
chr14:105995890-105996175	chr14	+	105995890	105996016	True	NM_025268,NM_001519	chr14,chr14	+,-	TMEM121,BRF1	-2988,-228561
chr3:146250347-146251310	chr3	+	146250358	146251326	True	NM_003412,NM_021105	chr3,chr3	+,-	ZIC1,PLSCR1	875854,11352
chrX:24047596-24048896	chrX	+	24047723	24048631	True	NM_030624,NM_001415	chrX,chrX	-,+	KLHL15,EIF2S3	-2420,24433
chr17:29296873-29298049	chr17	+	29297143	29297790	True	NM_001184992,NM_197939,NM_024683,NM_032322,NR_002221	chr17,chr17,chr17,chr17,chr17	+,+,-,+,+	RNF135,RNF135,C17orf42,RNF135,DPRXP4	165,165,-63857,165,4562
chr19:1322220-1323117	chr19	+	1322252	1323052	True	NR_027271,NM_032853	chr19,chr19	-,+	C19orf23,MUM1	-51993,31923
chr9:118235615-118236056	chr9	+	118235801	118235867	True	NM_017418,NM_002160	chr9,chr9	+,-	DEC1,TNC	-331755,-355315
chr12:105630082-105630769	chr12	+	105630148	105630743	True	NM_018171,NM_001145199	chr12,chr12	-,+	APPL2,C12orf75	-140,93670
chr18:72921753-72922498	chr18	+	72921772	72922519	True	NM_005786,NM_175907	chr18,chr18	+,-	TSHZ1,ZADH2	211,-491
chr10:51565737-51566822	chr10	+	51565740	51566424	True	NM_005437,NM_006327,NM_001145263,NM_001145262,NM_001145261,NM_001145260	chr10,chr10,chr10,chr10,chr10,chr10	+,-,+,+,+,+	NCOA4,TIMM23,NCOA4,NCOA4,NCOA4,NCOA4	5939,56966,-683,9860,-683,-683
chr11:533455-533709	chr11	+	533507	533641	True	NM_176795,NM_001130442,NM_005343,NM_198075	chr11,chr11,chr11,chr11	-,-,-,+	HRAS,HRAS,HRAS,LRRC56	1959,1959,1959,3880
chr14:105258079-105258718	chr14	+	105258085	105258651	True	NM_005163,NM_001014432,NM_001014431,NM_001137601	chr14,chr14,chr14,chr14	-,-,-,+	AKT1,AKT1,AKT1,ZBTB42	1337,3479,3479,8281
chr16:2508566-2509124	chr16	+	2508587	2508951	True	NM_001048212,NM_025108	chr16,chr16	-,+	CEMP1,C16orf59	72508,1163
chrY:24331684-24332462	chrY	+	24332173	24332389	True	NM_001006117,NR_002175,NM_152585	chrY,chrY,chrY	-,+,-	RBMY1J,TTTY6B,RBMY1F	-3084,-41090,-3084
chrY:24331684-24332462	chrY	-	24546322	24546538	False	NM_001006117,NR_002175	chrY,chrY	+,-	RBMY1J,TTTY6B	3084,41096
chr18:32957817-32958960	chr18	+	32958189	32958766	True	NM_145756,NR_024566	chr18,chr18	-,+	ZNF396,ZNF271	-888,-88010
chr16:21252939-21253598	chr16	+	21253107	21253448	True	NM_003460,NM_145865	chr16,chr16	-,+	ZP2,ANKS4B	-30239,-8153
chr19:11350155-11350360	chr19	+	11350157	11350323	True	NM_020812,NM_018687	chr19,chr19	-,+	DOCK6,LOC55908	22884,-11
chr5:18707555-18707853	chr5	+	18707700	18707754	True	NM_001167667,NM_006317	chr5,chr5	-,+	CDH18,BASP1	1280649,-1490001
chr17:40717842-40718714	chr17	+	40717944	40718581	True	NM_170607,NM_198204,NM_198205,NM_025233,NM_001042531,NM_001042530,NM_001042532,NM_013290,NM_001042529	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,+,+,-,+	MLX,MLX,MLX,COASY,COASY,COASY,COASY,PSMC3IP,COASY	496,496,496,-3903,-3903,-3903,-3903,11217,-3903
chr19:15084309-15084546	chr19	+	15084311	15084561	True	NM_005071,NM_012377	chr19,chr19	-,+	SLC1A6,OR7C2	-581,-32061
chr17:59490454-59490867	chr17	+	59490606	59490862	True	NM_199290,NM_203425	chr17,chr17	-,+	NACA2,C17orf82	177751,-1545
chr16:27409169-27409857	chr16	+	27409283	27409558	True	NM_181078,NM_181079,NR_037158	chr16,chr16,chr16	+,+,-	IL21R,IL21R,LOC283888	3924,3924,55216
chr3:10180097-10180375	chr3	+	10180132	10180221	True	NM_000551,NM_198156,NM_001164839	chr3,chr3,chr3	+,+,-	VHL,VHL,C3orf24	3097,3097,-30217
chr16:21288730-21289259	chr16	+	21288800	21289282	True	NM_001014444,NR_026675	chr16,chr16	-,+	CRYM,NCRNA00169	25172,22887
chr5:168729845-168730620	chr5	+	168729864	168730609	True	NM_017785,NM_003062	chr5,chr5	+,-	CCDC99,SLIT3	280028,-1731
chr12:14529782-14530448	chr12	+	14529872	14530296	True	NM_024829,NM_018179	chr12,chr12	-,+	PLBD1,ATF7IP	190547,-11315
chr1:166243538-166244968	chr1	+	166243561	166244927	True	NM_001017961,NR_002925	chr1,chr1	-,+	FAM78B,FMO9P	-107603,328225
chr16:52573986-52575218	chr16	+	52574331	52575237	True	NM_001080430,NM_025134,NM_001146188	chr16,chr16,chr16	-,+,-	TOX3,CHD9,TOX3	5619,513707,6527
chr15:102188393-102188743	chr15	+	102188441	102188735	True	NM_078474,NM_025141,NM_001005326	chr15,chr15,chr15	-,-,+	TM2D3,TM2D3,OR4F6	3916,3916,157187
chr10:81705989-81707368	chr10	+	81706131	81707145	True	NR_002724,NM_003019	chr10,chr10	+,-	MBL1P,SFTPD	-26248,1766
chr12:22784402-22786106	chr12	+	22784518	22786151	True	NM_014802,NM_018638,NM_001039481	chr12,chr12,chr12	-,+,+	KIAA0528,ETNK1,ETNK1	-87066,-6495,-6495
chr4:17509984-17511240	chr4	+	17510071	17511062	True	NM_000320,NM_001079827	chr4,chr4	-,+	QDPR,CLRN2	2852,5725
chr11:118536888-118537750	chr11	+	118537053	118537551	True	NM_001144759,NM_007180	chr11,chr11	+,-	PHLDB1,TREH	-58805,12880
chr9:139839852-139840150	chr9	+	139839866	139840144	True	NM_000606,NM_018998,NM_178536	chr9,chr9,chr9	+,-,+	C8G,FBXW5,LCN12	-219,-693,6623
chr6:35185313-35185519	chr6	+	35185325	35185509	True	NM_152753,NM_018679	chr6,chr6	+,-	SCUBE3,TCP11	-3186,-76138
chr22:51218131-51219488	chr22	+	51218765	51219455	True	NM_001003789,NM_001130919,NM_001130920,NM_001130921,NM_001130922,NM_001130923	chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,-,-	RABL2B,RABL2B,RABL2B,RABL2B,RABL2B,RABL2B	2682,2682,2682,2682,2682,2682
chr22:51218131-51219488	chr2	-	114387445	114388121	False	NM_007082,NR_000029,NM_013412,NR_024529,NR_024528,NR_024530,NR_024531	chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,-,+,-,-,-,-	RABL2A,RPL23AP7,RABL2A,RPL23AP7,RPL23AP7,RPL23AP7,RPL23AP7	-2679,-2730,-2679,-2730,-2730,-2730,-2730
chr17:7832032-7832495	chr17	+	7832186	7832432	True	NM_053051,NR_030697,NM_001166621,NR_030684,NM_004732,NM_001037144,NM_021210	chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,-,-,+,-	CNTROB,TRAPPC1,TRAPPC1,TRAPPC1,KCNAB3,CNTROB,TRAPPC1	3040,2937,2937,2887,373,3040,2887
chr22:29948665-29949304	chr22	+	29949252	29949342	True	NM_181825,NM_001002877,NM_001002878,NM_001002879,NM_003678	chr22,chr22,chr22,chr22,chr22	+,-,-,-,-	NF2,THOC5,THOC5,THOC5,THOC5	50202,444,352,352,444
chr17:19027242-19027886	chr17	+	19027242	19027621	True	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	3160,-76906
chr17:19027242-19027886	chr17	-	18953547	18953926	False	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	76855,-3211
chr19:8431228-8431768	chr19	+	8431253	8431719	True	NM_139314,NM_001039667,NM_198471	chr19,chr19,chr19	+,+,-	ANGPTL4,ANGPTL4,KANK3	-2293,-2293,-23107
chr9:127905011-127905352	chr9	+	127905014	127905114	True	NM_001144877,NM_001174152,NM_173690	chr9,chr9,chr9	-,+,-	SCAI,RABEPK,SCAI	774,57706,774
chr11:63444724-63446466	chr11	+	63445107	63446454	True	NM_201428,NM_201429,NM_006054,NM_015459,NM_201430	chr11,chr11,chr11,chr11,chr11	+,+,+,-,+	RTN3,RTN3,RTN3,ATL3,RTN3	2467,2467,2467,-6024,2467
chr6:66250738-66252620	chr6	+	66251022	66252651	True	NR_026540,NM_198283	chr6,chr6	+,-	MCART3P,EYS	245120,37104
chr3:32827875-32828527	chr3	+	32828004	32828089	True	NM_016141,NM_001039111	chr3,chr3	-,+	DYNC1LI1,TRIM71	-215638,31420
chr12:49464053-49464543	chr12	+	49464095	49464478	True	NM_144593,NM_005430	chr12,chr12	-,+	RHEBL1,WNT1	-320,-91912
chr16:53736636-53737639	chr16	+	53736713	53737463	True	NM_001080432,NM_015272,NM_001127897	chr16,chr16,chr16	+,-,-	FTO,RPGRIP1L,RPGRIP1L	411,358,358
chr17:62222552-62223348	chr17	+	62222599	62223257	True	NR_004380,NM_001433,NR_002995	chr17,chr17,chr17	+,-,+	SNORD104,ERN1,SNORA76	180,-15097,441
chr1:35227532-35228277	chr1	+	35227630	35228253	True	NM_001164824,NM_153212,NM_005268	chr1,chr1,chr1	-,+,+	C1orf212,GJB4,GJB5	96443,-2339,-6960
chr1:161188139-161188584	chr1	+	161188219	161188591	True	NM_004106,NM_001643,NM_032174	chr1,chr1,chr1	+,-,+	FCER1G,APOA2,TOMM40L	-3196,4877,7241
chr11:65712294-65712547	chr11	+	65712303	65712363	True	NM_031450,NM_152762	chr11,chr11	-,+	C11orf68,TSGA10IP	-25772,751
chr19:51307254-51307685	chr19	+	51307266	51307652	True	NR_003067,NR_003069,NR_003068,NM_033068,NM_199249,NM_199250	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,+,-,-	SNORD88A,SNORD88C,SNORD88B,ACPT,C19orf48,C19orf48	-4474,-1588,-4884,-13645,372,370
chr19:57101085-57102702	chr19	+	57101304	57102273	True	NM_021216,NM_001005850	chr19,chr19	+,-	ZNF71,ZNF835	4390,82023
chr12:19591046-19591845	chr12	+	19591049	19591901	True	NM_033123,NM_153207,NM_001114176	chr12,chr12,chr12	-,+,+	PLCZ1,AEBP2,AEBP2	-700131,706,706
chr6:31782542-31782759	chr6_qbl_hap6	+	3076200	3076358	False	NM_005345,NM_005527,NM_021177	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	+,-,-	HSPA1A,HSPA1L,LSM2	579,174,-7820
chr6:31782542-31782759	chr6_dbb_hap3	+	3068140	3068298	False	NM_005345,NM_005527,NM_021177	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	+,-,-	HSPA1A,HSPA1L,LSM2	579,174,-7814
chr6:31782542-31782759	chr6	+	31782553	31782711	True	NM_005345,NM_005527,NM_021177	chr6,chr6,chr6	+,-,-	HSPA1A,HSPA1L,LSM2	579,174,-7810
chr6:31782542-31782759	chr6_apd_hap1	+	3097314	3097472	False	NM_005345,NM_005527,NM_021177	chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1	+,-,-	HSPA1A,HSPA1L,LSM2	579,174,-7820
chr6:31782542-31782759	chr6_cox_hap2	+	3292133	3292291	False	NM_005345,NM_005527,NM_021177	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,-,-	HSPA1A,HSPA1L,LSM2	579,174,-7819
chr1:12913894-12914282	chr1	+	12913932	12914202	True	NM_001013631,NM_023014,NM_001146181	chr1,chr1,chr1	-,+,-	HNRNPCL1,PRAMEF2,LOC649330	-5354,2738,-5695
chr19:59056187-59056461	chr19	+	59056301	59056411	True	NM_198426,NM_005762	chr19,chr19	-,+	CHMP2A,TRIM28	9994,-516
chr8:17570004-17570877	chr8	+	17570274	17570918	True	NM_001001931,NM_006207,NM_001166393	chr8,chr8,chr8	-,+,-	MTUS1,PDGFRL,MTUS1	8862,-136383,9216
chr8:145049510-145049947	chr8	+	145049565	145049989	True	NM_201378,NM_000837,NM_000445	chr8,chr8,chr8	-,+,-	PLEC,GRINA,PLEC	-1868,14236,974
chr7:96740180-96741253	chr7	+	96740394	96741123	True	NM_005221,NM_020186	chr7,chr7	-,+	DLX5,ACN9	-86251,4781
chr4:8596590-8597070	chr4	+	8596870	8596964	True	NM_001014447,NM_003501,NM_001014448,NM_003652	chr4,chr4,chr4,chr4	+,-,+,+	CPZ,ACOX3,CPZ,CPZ	-2546,-154418,-2546,-2546
chr17:42923106-42924521	chr17	+	42923312	42924226	True	NM_016438,NM_001080383	chr17,chr17	+,-	HIGD1B,GJC1	1052,-15133
chr4:156770930-156771584	chr4	+	156770929	156771393	True	NM_005651,NM_017419	chr4,chr4	+,-	TDO2,ACCN5	53453,16093
chr11:64073884-64074096	chr11	+	64073913	64074121	True	NM_004451,NM_001039496,NM_016404	chr11,chr11,chr11	+,+,-	ESRRA,C11orf20,TRMT112	-920,-6101,10962
chr19:13056242-13056625	chr19	+	13056457	13056647	True	NM_005053,NM_004343,NM_052850	chr19,chr19,chr19	+,+,-	RAD23A,CALR,GADD45GIP1	6,-7094,11453
chr11:55032451-55032741	chr11	+	55032509	55032624	True	NM_001004700,NM_024114	chr11,chr11	-,+	OR4C11,TRIM48	339276,-2915
chr2:202297108-202298726	chr2	+	202297311	202298651	True	NM_015049,NM_018571	chr2,chr2	-,+	TRAK2,STRADB	17718,17740
chr6:107349711-107350388	chr6	+	107349840	107350206	True	NM_001080450,NM_016487,NM_001142468,NM_001142470	chr6,chr6,chr6,chr6	-,+,+,+	BEND3,C6orf203,C6orf203,C6orf203	85488,-485,-485,-485
chr2:175548813-175549269	chr2	+	175548837	175549285	True	NM_024583,NM_001077269	chr2,chr2	+,-	SCRN3,WIPF1	-288431,-1210
chr11:128761212-128762216	chr11	+	128761219	128762095	True	NM_000890,NM_145013	chr11,chr11	+,-	KCNJ5,C11orf45	43,13547
chr3:108279313-108281267	chr3	+	108279396	108281301	True	NM_020890,NM_014648	chr3,chr3	-,+	KIAA1524,DZIP3	27240,27035
chr18:32290560-32290951	chr18	+	32290689	32290968	True	NM_032978,NM_001198941,NM_003787	chr18,chr18,chr18	+,+,-	DTNA,DTNA,NOL4	-553,-553,-487174
chr6:28105085-28105312	chr6	+	28105138	28105336	True	NR_002936,NM_006298	chr6,chr6	-,+	LOC222699,ZNF192	81421,4379
chr9:135232622-135233166	chr9	+	135232653	135232933	True	NM_207417,NM_015046	chr9,chr9	+,-	C9orf171,SETX	52677,-2281
chr19:45031772-45033537	chr19	+	45031826	45033471	True	NM_001102598,NM_001102599,NM_001205280,NM_001102600,NM_001102597	chr19,chr19,chr19,chr19,chr19	-,-,+,-,-	CEACAM20,CEACAM20,LOC147710,CEACAM20,CEACAM20	127,127,83468,127,127
chr6:36648447-36649322	chr6	+	36648512	36648995	True	NR_037491,NM_078467,NM_000389,NR_037152,NR_037150,NR_037151	chr6,chr6,chr6,chr6,chr6,chr6	-,+,+,+,+,+	MIR3925,CDKN1A,CDKN1A,CDKN1A,CDKN1A,CDKN1A	-58223,-4304,-2115,-4334,-4257,-2084
chr19:16655303-16656210	chr19	+	16655728	16656046	True	NM_006387,NM_032207	chr19,chr19	-,+	CHERP,C19orf44	-2465,-48574
chr1:28969797-28970086	chr1	+	28969798	28970134	True	NM_001135218,NM_005644,NR_004407	chr1,chr1,chr1	-,-,+	TAF12,TAF12,RNU11	-194,-194,4977
chr19:53717494-53718522	chr19	+	53717685	53718431	True	NM_024733,NM_173856	chr19,chr19	-,+	ZNF665,VN1R2	-21066,43113
chr2:160909307-160910289	chr2	+	160909341	160910148	True	NM_001195641,NM_022826,NM_007366,NM_001007267	chr2,chr2,chr2,chr2	-,+,-,-	PLA2R1,MARCH7,PLA2R1,PLA2R1	9028,-340382,9028,9028
chr1:59094327-59096052	chr1	+	59094427	59095893	True	NM_002353,NR_034014	chr1,chr1	-,+	TACSTD2,LOC100131060	-51261,154929
chr11:133770256-133770465	chr11	+	133770311	133770465	True	NR_024344,NR_027276	chr11,chr11	-,+	LOC283174,LOC100128239	1220,131701
chr4:40198602-40198869	chr4	+	40198602	40198919	True	NM_004310,NR_027277	chr4,chr4	+,-	RHOH,LOC344967	-126,-139783
chr19:36342298-36342536	chr19	+	36342302	36342372	True	NM_199180,NM_004646,NM_032123,NM_199179	chr19,chr19,chr19,chr19	+,-,+,+	KIRREL2,NPHS1,KIRREL2,KIRREL2	5437,573,5437,5437
chr16:29273198-29273401	chr16	+	29273205	29273391	True	NR_002939,NM_001031827	chr16,chr16	+,-	RUNDC2C,BOLA2	29149,192944
chr16:29273198-29273401	chr16	+	88268447	88268656	False	NM_001127464,NM_001739	chr16,chr16	+,-	ZNF469,CA5A	225222,-298335
chr10:56518612-56519017	chr10	+	56518678	56519067	True	NM_001190478,NM_001142771	chr10,chr10	+,-	MTRNR2L5,PCDH15	839682,42039
chr5:131562714-131563013	chr5	+	131562805	131563011	True	NM_001017973,NM_001142598,NM_001142599,NM_001017974,NM_001131027,NM_004199	chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,+,-	P4HA2,P4HA2,P4HA2,P4HA2,PDLIM4,P4HA2	-26,595,595,595,30339,-26
chr7:16685979-16686245	chr7	+	16686094	16686245	True	NM_020319,NM_014038,NM_001159767,NR_027624	chr7,chr7,chr7,chr7	-,+,+,+	ANKMY2,BZW2,BZW2,BZW2	-652,-386,-386,-386
chr8:62627219-62628188	chr8	+	62627362	62628061	True	NM_004318,NM_001164756,NM_001164754,NM_001164755,NM_173519,NM_032466	chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,+,-	ASPH,ASPH,ASPH,ASPH,CLVS1,ASPH	-163,-163,-163,-163,-426888,-163
chr19:41035253-41035940	chr19	+	41035598	41035916	True	NM_025213,NM_000713	chr19,chr19	+,-	SPTBN4,BLVRB	478,-63873
chrX:95939695-95939902	chrX	+	95939705	95939773	True	NM_007309,NR_003539,NM_006729	chrX,chrX,chrX	+,-,+	DIAPH2,LOC643486,DIAPH2	-94,-346804,-94
chr6:10411991-10412346	chr6	+	10412001	10412295	True	NM_001042425,NM_001032280,NM_003220,NR_033910	chr6,chr6,chr6,chr6	-,-,-,+	TFAP2A,TFAP2A,TFAP2A,LOC100130275	7565,375,3238,255
chr4:122744136-122744358	chr4	+	122744136	122744316	True	NM_005033,NM_001237	chr4,chr4	+,-	EXOSC9,CCNA2	-21718,822
chr11:77900915-77902001	chr11	+	77900924	77901958	True	NM_001029859,NM_020798	chr11,chr11	-,+	KCTD21,USP35	-1260,-1117
chr19:3483830-3484133	chr19	+	3484042	3484126	True	NM_016263,NM_001136503	chr19,chr19	+,-	FZR1,C19orf77	22168,-3502
chr6:161134392-161135528	chr6	+	161134832	161135575	True	NM_000301,NM_005577	chr6,chr6	+,-	PLG,LPA	-11668,-47425
chr16:21312441-21313065	chr16	+	21312457	21313026	True	NM_001888,NM_001014444,NR_026675	chr16,chr16,chr16	-,-,+	CRYM,CRYM,NCRNA00169	1428,1428,-338
chr6:139694251-139694551	chr6	+	139694285	139694445	True	NM_016217,NM_001168389,NM_001168388,NM_006079	chr6,chr6,chr6,chr6	+,-,-,-	HECA,CITED2,CITED2,CITED2	-238087,955,1104,1390
chr12:21537992-21539663	chr12	+	21538100	21539113	True	NM_134431,NM_000415	chr12,chr12	-,+	SLCO1A2,IAPP	9317,-12358
chr8:56814333-56815699	chr8	+	56814346	56815132	True	NM_002350,NM_152417	chr8,chr8	+,-	LYN,TMEM68	-22018,-128461
chr22:17567736-17568917	chr22	+	17567899	17568747	True	NM_031890,NM_014339	chr22,chr22	-,+	CECR6,IL17RA	33524,-2099
chrX:71351779-71352109	chrX	+	71351920	71352012	True	NM_207422,NM_001024455	chrX,chrX	+,-	FLJ44635,RGAG4	12021,-169
chr17:43301522-43302168	chr17	+	43301528	43302194	True	NM_152343,NM_005892	chr17,chr17	-,+	C17orf46,FMNL1	37335,-2287
chr2:176866073-176866365	chr2	+	176866088	176866380	True	NM_030650,NM_000523	chr2,chr2	-,+	KIAA1715,HOXD13	688,91151
chr8:144373934-144375744	chr8	+	144374345	144375684	True	NM_030895,NM_052963	chr8,chr8	+,-	ZNF696,TOP1MT	-837,41416
chr1:110036978-110037178	chr1	+	110037100	110037176	True	NM_020703,NM_001134403,NM_001134402,NM_182580,NM_001134404,NM_001134400	chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,+,+,+	AMIGO1,CYB561D1,CYB561D1,CYB561D1,CYB561D1,CYB561D1	15210,-450,-493,-450,-450,-450
chr17:75448119-75448403	chr17	+	75448140	75448366	True	NM_001113496,NR_036200	chr17,chr17	+,-	SEPT9,MIR4316	-1578,-55004
chr5:176936880-176937444	chr5	+	176937005	176937383	True	NM_001144875,NM_001174102,NM_024872,NM_001144876,NM_016222	chr5,chr5,chr5,chr5,chr5	-,+,-,-,-	DOK3,PRR7,DOK3,DOK3,DDX41	94,-61730,-147,94,6634
chr11:122751839-122753367	chr11	+	122752584	122753172	True	NM_024806,NM_001098169,NM_199124	chr11,chr11,chr11	+,-,+	C11orf63,BSX,C11orf63	300,99263,300
chr2:85787648-85788203	chr2	+	85787763	85788235	True	NM_003761,NM_001142269,NM_000821	chr2,chr2,chr2	+,-,-	VAMP8,GGCX,GGCX	16378,472,472
chr4:38657228-38658501	chr4	+	38657574	38658379	True	NM_016531,NR_026804	chr4,chr4	+,-	KLF3,FLJ13197	7410,7929
chr5:23505285-23506751	chr5	+	23505772	23506676	True	NM_020227,NM_004061	chr5,chr5	+,-	PRDM9,CDH12	1047,-652041
chr3:53189888-53190396	chr3	+	53190090	53190324	True	NM_006254,NM_052859,NM_212539	chr3,chr3,chr3	+,-,+	PRKCD,RFT1,PRKCD	4898,-25620,4898
chr16:88802531-88803259	chr16	+	88802652	88803308	True	NM_178841,NM_001012762	chr16,chr16	-,+	RNF166,CTU2	-29823,-29812
chr3:149148622-149150473	chr3	+	149149170	149150489	True	NM_004617,NM_014220	chr3,chr3	+,-	TM4SF4,TM4SF1	41878,-53602
chr1:10097378-10098026	chr1	+	10097433	10098051	True	NM_001105562,NM_032368,NM_006048	chr1,chr1,chr1	+,-,+	UBE4B,LZIC,UBE4B	-4457,-94607,-4457
chr1:55272038-55272576	chr1	+	55272084	55272575	True	NM_017904,NM_001114108,NM_152607,NM_001110533	chr1,chr1,chr1,chr1	-,-,+,+	TTC22,TTC22,C1orf177,C1orf177	-5143,-5143,-399,-399
chrX:133371524-133371986	chrX	+	133371694	133372020	True	NM_001101357,NR_029523	chrX,chrX	+,-	CCDC160,MIR106A	-668,-67386
chr20:38551228-38552232	chr20	+	38551607	38552261	True	NR_033905,NR_027124	chr20,chr20	+,-	DHX35,LOC339568	-960678,-698216
chr8:145201755-145201988	chr8	+	145201864	145201988	True	NM_030974,NM_032450,NM_016458,NM_001099281,NM_001099280	chr8,chr8,chr8,chr8,chr8	-,+,+,+,+	SHARPIN,HEATR7A,FAM203A,HEATR7A,HEATR7A	-42724,930,-9243,930,930
chr8:145201755-145201988	chr8	+	145447072	145447196	False	NM_016458,NM_015201	chr8,chr8	+,-	FAM203A,BOP1	-9243,67974
chrX:134556748-134556959	chrX	+	134556752	134556816	True	NR_024359,NM_007131	chrX,chrX	+,-	NCRNA00086,ZNF75D	-935,-126787
chrX:134556748-134556959	chrX	-	134231901	134231951	False	NR_024493,NM_001078171	chrX,chrX	-,+	NCRNA00087,FAM127A	832,-65619
chrY:24584891-24585344	chrY	+	24585002	24585267	True	NM_001006117,NR_002175,NR_001527	chrY,chrY,chrY	+,-,-	RBMY1J,TTTY6B,TTTY6	-35437,2368,2390
chrY:24584891-24585344	chrY	-	24293450	24293715	False	NM_001006117,NR_002175,NR_001527	chrY,chrY,chrY	-,+,+	RBMY1J,TTTY6B,TTTY6	35431,-2368,-2390
chr10:75540954-75541504	chr10	+	75541150	75541462	True	NM_015037,NM_003635,NM_203298,NM_173540	chr10,chr10,chr10,chr10	+,-,+,+	KIAA0913,NDST2,CHCHD1,FUT11	4142,30180,345,-9153
chr4:99051417-99051927	chr4	+	99051649	99051799	True	NM_174952,NM_001100426	chr4,chr4	-,+	C4orf37,RAP1GDS1	12648,130727
chr6:26398964-26399364	chr6	+	26399121	26399406	True	NM_194441,NM_001145009,NM_001145008,NM_003543,NM_007048	chr6,chr6,chr6,chr6,chr6	+,+,+,-,+	BTN3A1,BTN3A1,BTN3A1,HIST1H4H,BTN3A1	3058,3058,3058,-113394,3058
chr15:52126882-52128812	chr15	+	52127061	52128140	True	NM_014547,NM_001143917	chr15,chr15	+,-	TMOD3,LYSMD2	-5287,-83411
chr4:39460312-39460685	chr4	+	39460349	39460701	True	NM_001024921,NM_194451,NM_000661,NM_006859	chr4,chr4,chr4,chr4	-,+,-,+	RPL9,LIAS,RPL9,LIAS	-142,-31,-11,-31
chr19:10544315-10544526	chr19	+	10544409	10544519	True	NM_007065,NM_001111309,NM_001111308	chr19,chr19,chr19	-,+,+	CDC37,PDE4A,PDE4A	-30138,-1349,-2939
chr10:52751604-52751820	chr10	+	52751660	52751724	True	NM_138933,NM_001098512	chr10,chr10	-,+	A1CF,PRKG1	-106225,-766
chr19:21511831-21512131	chr19	+	21511873	21512159	True	NR_027130,NM_021269	chr19,chr19	+,-	ZNF738,ZNF708	29575,103
chr8:27950048-27950317	chr8	+	27950107	27950241	True	NM_018091,NM_001010906	chr8,chr8	+,-	ELP3,C8orf80	342,-8719
chr17:15525592-15526015	chr17	+	15525742	15525990	True	NM_006382,NM_001130842	chr17,chr17	-,+	CDRT1,ZNF286A	-2724,76900
chr17:15525592-15526015	chr17	-	18644416	18644644	False	NM_001145045,NM_031456	chr17,chr17	-,+	ZNF286B,FBXW10	-58844,2681
chr2:95824620-95824905	chr2	+	95824681	95824815	True	NM_021088,NM_032788,NM_001017396	chr2,chr2,chr2	+,-,+	ZNF2,ZNF514,ZNF2	6367,498,6367
chr6:47621509-47621829	chr6	+	47621589	47621867	True	NM_153839,NM_014452	chr6,chr6	+,-	GPR111,TNFRSF21	2458,-343909
chr3:46916068-46916367	chr3	+	46916075	46916331	True	NM_000316,NM_001184744,NM_000258	chr3,chr3,chr3	+,+,-	PTH1R,PTH1R,MYL3	2904,7407,-11102
chr11:76090338-76091362	chr11	+	76090446	76091316	True	NM_020193,NM_004705	chr11,chr11	+,-	C11orf30,PRKRIR	64752,614
chr1:193073729-193073979	chr1	+	193073785	193074008	True	NM_197962,NM_024529,NM_016066	chr1,chr1,chr1	-,+,-	GLRX2,CDC73,GLRX2	599,17079,1287
chr16:2008561-2008931	chr16	+	2008727	2008895	True	NR_003142,NM_174903,NM_005061,NM_002952,NR_002327,NR_002326,NR_003020,NM_004548	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,-,-,-,-,+,+	SNHG9,RNF151,RPL3L,RPS2,SNORA10,SNORA64,SNORA78,NDUFB10	6101,7979,-4048,5982,3622,4262,6289,621
chr1:247243888-247244378	chr1	+	247243917	247244196	True	NM_173858,NR_037894,NM_001204220,NM_033213	chr1,chr1,chr1,chr1	+,-,-,-	VN1R5,ZNF670-ZNF695,ZNF670,ZNF670	175177,-1802,-1802,-1802
chr18:579756-580195	chr18	+	580086	580214	True	NM_004066,NM_001012716	chr18,chr18	+,-	CETN1,C18orf56	154,78176
chr3:58194686-58195068	chr3	+	58194812	58195086	True	NM_020676,NM_004944	chr3,chr3	+,-	ABHD6,DNASE1L3	28172,5362
chr3:167348890-167349666	chr3	+	167349162	167349683	True	NM_178824,NM_001122752	chr3,chr3	-,+	WDR49,SERPINI1	21659,103748
chr2:62943334-62944805	chr2	+	62943443	62944711	True	NM_198276,NM_001142614	chr2,chr2	-,+	TMEM17,EHBP1	-209839,-9462
chr6:52548705-52550429	chr6	+	52548792	52550462	True	NM_014051,NR_033760	chr6,chr6	+,-	TMEM14A,GSTA7P	-12965,59547
chr6:158957526-158957742	chr6	+	158957554	158957790	True	NM_006519,NM_020823	chr6,chr6	-,+	DYNLT1,TMEM181	108064,-137
chr9:98780901-98782318	chr9	+	98781099	98781863	True	NR_033838,NR_024129	chr9,chr9	+,-	LOC158435,NCRNA00092	46257,2224
chr17:8268421-8268631	chr17	+	8268420	8268660	True	NM_213597,NM_153007,NR_024447	chr17,chr17,chr17	-,+,-	KRBA2,ODF4,LOC100128288	6248,-25283,-4561
chr17:8268631-8269162	chr17	+	8268684	8269156	True	NM_213597,NM_153007,NR_024447	chr17,chr17,chr17	-,+,-	KRBA2,ODF4,LOC100128288	5752,-25547,-4825
chr11:1035781-1036305	chr11	+	1035821	1036199	True	NM_002457,NM_005961	chr11,chr11	+,-	MUC2,MUC6	38675,557
chr13:53029818-53030041	chr13	+	53029904	53029984	True	NM_001098525,NM_016075,NM_018204	chr13,chr13,chr13	+,-,+	CKAP2,VPS36,CKAP2	-460,-5141,-460
chr20:59829608-59830180	chr20	+	59829787	59830181	True	NM_001794,NR_031658	chr20,chr20	+,-	CDH4,MIR1257	-2281,698587
chr4:56455755-56456286	chr4	+	56455768	56456092	True	NM_152401,NM_018475	chr4,chr4	-,+	PDCL2,TMEM165	2337,-193734
chr1:6477802-6478799	chr1	+	6477955	6478819	True	NM_019089,NM_031475	chr1,chr1	-,+	HES2,ESPN	1210,6028
chr9:70971204-70971553	chr9	+	70971504	70971566	True	NR_015423,NM_021965	chr9,chr9	-,+	LOC572558,PGM5	1241,248
chrX:48457369-48458027	chrX	+	48457375	48457857	True	NM_001166426,NM_017883,NM_033518,NR_029427	chrX,chrX,chrX,chrX	+,+,-,+	WDR13,WDR13,SLC38A5,WDR13	-1202,-1546,-128731,-1546
chr1:100134089-100134998	chr1	+	100134125	100135021	True	NR_037516,NR_030382	chr1,chr1	+,-	MIR548AA1,MIR548D1	19589,43542
chr5:75010431-75010857	chr5	+	75010436	75010839	True	NM_152408,NM_016218,NM_001099271	chr5,chr5,chr5	-,+,-	POC5,POLK,POC5	-2156,-202830,2529
chr1:146733572-146735009	chr1	+	146733896	146734581	True	NM_004284,NM_001461	chr1,chr1	+,-	CHD1L,FMO5	-19668,-36666
chr12:125810686-125811212	chr12	+	125810740	125811178	True	NM_032656,NM_052907	chr12,chr12	-,+	DHX37,TMEM132B	-337073,-17
chr9:95568809-95569577	chr9	+	95568909	95569599	True	NM_015250,NR_026868	chr9,chr9	-,+	BICD2,ANKRD19	-41826,2293
chr2:69870300-69870521	chr2	+	69870320	69870478	True	NM_014911,NM_001153	chr2,chr2	-,+	AAK1,ANXA4	549,98648
chr19:17185338-17185970	chr19	+	17185617	17185917	True	NM_001130065,NM_001011699,NM_004145,NM_033417	chr19,chr19,chr19,chr19	+,-,+,-	MYO9B,HAUS8,MYO9B,HAUS8	673,476,673,476
chr2:64358719-64359569	chr2	+	64359048	64359614	True	NM_006759,NM_020651	chr2,chr2	+,-	UGP2,PELI1	-290086,12041
chrX:131168615-131168919	chrX	+	131168718	131168948	True	NM_001042452,NM_194277	chrX,chrX	+,-	MST4,FRMD7	-11133,93160
chr6:24503658-24505122	chr6	+	24503720	24505014	True	NM_170740,NM_001503,NM_001080	chr6,chr6,chr6	+,-,+	ALDH5A1,GPLD1,ALDH5A1	-8574,-13870,-8574
chr16:67427988-67428251	chr16	+	67428089	67428209	True	NM_016140,NM_015964,NM_000196	chr16,chr16,chr16	-,-,+	TPPP3,TPPP3,HSD11B2	-668,-668,36826
chr10:73977087-73977820	chr10	+	73977254	73977782	True	NM_001198799,NM_001198800,NM_173473,NM_015947,NM_001198798	chr10,chr10,chr10,chr10,chr10	-,-,+,-,-	ASCC1,ASCC1,ANAPC16,ASCC1,ASCC1	-1071,-1071,-1499,-1503,-1503
chr11:65653800-65655076	chr11	+	65653867	65655073	True	NM_198897,NM_004214,NM_006848,NM_001335	chr11,chr11,chr11,chr11	-,-,+,+	FIBP,FIBP,CCDC85B,CTSW	987,987,2801,-6634
chr8:7825085-7825529	chr8	+	7825088	7825560	True	NR_003668,NR_027424	chr8,chr8	-,+	DEFB109P1B,FAM66E	29533,-12604
chr8:7825085-7825529	chr8	+	11986136	11986300	False	NR_003275,NR_027425	chr8,chr8	-,+	LOC392196,FAM66D	554,-12896
chr8:7825085-7825529	chr8	-	7199853	7200325	False	NR_027423,NR_003668	chr8,chr8	-,+	FAM66B,DEFB109P1B	12601,-29536
chr8:38459952-38460285	chr8	+	38460039	38460325	True	NR_003129,NM_001146216	chr8,chr8	-,+	RNF5P1,TACC1	-1264,125378
chr11:69455038-69455288	chr11	+	69455078	69455256	True	NM_153451,NM_053056	chr11,chr11	-,+	ORAOV1,CCND1	34959,616
chrX:114423905-114424262	chrX	+	114423920	114424240	True	NM_001145346,NM_020871	chrX,chrX	+,-	RBMXL3,LRCH2	-8,44445
chr5:118794981-118795242	chr5	+	118795037	118795153	True	NM_173666,NM_000414,NM_001199292,NM_001199291	chr5,chr5,chr5,chr5	-,+,+,+	DTWD2,HSD17B4,HSD17B4,HSD17B4	-470797,-6952,-6952,-6888
chr18:8724674-8725878	chr18	+	8724734	8725477	True	NM_015210,NR_024419	chr18,chr18	+,-	KIAA0802,LOC100192426	-7427,-357702
chr3:27489679-27490196	chr3	+	27489740	27490237	True	NM_003615,NM_182523	chr3,chr3	-,+	SLC4A7,CMC1	8058,792886
chr10:10836300-10836627	chr10	+	10836435	10836681	True	NR_027082,NM_001025077	chr10,chr10	-,+	SFTA1P,CELF2	251,210577
chr8:117777051-117778704	chr8	+	117777353	117778537	True	NM_003756,NM_032334	chr8,chr8	-,+	EIF3H,UTP23	-9291,204
chr9:112811859-112812059	chr9	+	112811931	112811993	True	NM_001012993,NM_001004065,NM_001198656	chr9,chr9,chr9	-,+,+	C9orf152,AKAP2,AKAP2	158470,-1104,-1104
chr2:55842717-55844347	chr2	+	55843690	55844303	True	NM_080667,NM_020463,NM_001122964	chr2,chr2,chr2	+,-,-	CCDC104,SMEK2,SMEK2	-97001,543,543
chr3:42814196-42814551	chr3	+	42814268	42814502	True	NM_001296,NM_144719	chr3,chr3	+,-	CCBP2,CCDC13	36461,293
chr17:61604429-61605931	chr17	+	61604764	61605918	True	NM_001915,NM_173092,NM_030779	chr17,chr17,chr17	-,+,+	CYB561,KCNH6,KCNH6	-81042,-4120,-4120
chr1:108733910-108734407	chr1	+	108734132	108734424	True	NM_213651,NM_013386,NM_001143987	chr1,chr1,chr1	-,-,+	SLC25A24,SLC25A24,NBPF6	989,8600,258479
chr8:42244966-42246754	chr8	+	42245182	42246809	True	NM_014420,NM_001135694,NM_005662	chr8,chr8,chr8	-,+,+	DKK4,VDAC3,VDAC3	-10508,2536,2536
chr17:20796269-20798105	chr17	+	20797166	20797885	True	NM_001004306,NM_015510	chr17,chr17	-,+	CCDC144NL,DHRS7B	1631,232372
chr17:20796269-20798105	chr17	-	16595177	16595389	False	NM_020787,NM_014695	chr17,chr17	-,+	ZNF624,CCDC144A	-38010,-1605
chr17:20796269-20798105	chr17	+	18526789	18526840	False	NR_036647,NM_001037330	chr17,chr17	-,+	CCDC144B,TRIM16L	2141,98561
chr17:20796269-20798105	chr17	-	20226379	20226591	False	NM_001042685,NR_023380	chr17,chr17	-,+	LGALS9B,CCDC144C	144308,-1959
chr10:15752831-15754522	chr10	+	15753247	15754004	True	NM_183005,NM_003638	chr10,chr10	+,-	RPP38,ITGA8	-614117,7824
chr19:19386520-19387395	chr19	+	19386535	19387437	True	NM_001001524,NM_015329	chr19,chr19	-,+	TM6SF2,MAU2	-2461,44192
chr19:913622-913990	chr19	+	913658	913876	True	NM_138774,NM_032551	chr19,chr19	-,+	C19orf22,KISS1R	-433,3465
chr15:74832011-74833130	chr15	+	74832674	74833140	True	NM_006465,NM_201265	chr15,chr15	+,-	ARID3B,UBL7	407,-79145
chr16:57406660-57407772	chr16	+	57406914	57407784	True	NM_020313,NM_002996	chr16,chr16	-,+	CIAPIN1,CX3CL1	73635,-551
chr22:37259336-37260023	chr22	+	37259381	37260045	True	NM_013416,NM_000631,NM_002854	chr22,chr22,chr22	+,+,-	NCF4,NCF4,PVALB	-2402,-2402,-43864
chr17:36905038-36905267	chr17	+	36905058	36905146	True	NM_007144,NM_002795	chr17,chr17	-,+	PCGF2,PSMB3	-500,3855
chr2:178124582-178125758	chr2	+	178124960	178125420	True	NM_194247,NM_006164,NR_036075,NM_001145412,NM_001145413	chr2,chr2,chr2,chr2,chr2	+,-,-,-,-	HNRNPA3,NFE2L2,MIR3128,NFE2L2,NFE2L2	-47597,4495,-4222,3253,3253
chr4:122619829-122621616	chr4	+	122619918	122621639	True	NR_024365,NM_001154	chr4,chr4	+,-	LOC100192379,ANXA5	64100,-1771
chr20:44717265-44717589	chr20	+	44717273	44717625	True	NM_020967,NM_001250	chr20,chr20	-,+	NCOA5,CD40	1009,29280
chr21:17117204-17118088	chr21	+	17117205	17118131	True	NM_003489,NM_013396	chr21,chr21	-,+	NRIP1,USP25	-680079,-14760
chr5:138737314-138738701	chr5	+	138737384	138738630	True	NM_001033112,NM_194296,NM_001161546	chr5,chr5,chr5	+,-,-	PAIP2,SPATA24,LOC389333	-59301,1196,-6499
chr17:38905354-38907274	chr17	+	38905708	38907276	True	NM_001195387,NM_181534	chr17,chr17	+,-	TMEM99,KRT25	68067,4358
chr19:49947219-49948163	chr19	+	49947761	49947866	True	NM_020309,NM_153329,NM_001145396,NM_017916	chr19,chr19,chr19,chr19	-,+,+,-	SLC17A7,ALDH16A1,ALDH16A1,PIH1D1	-2953,8606,8606,7308
chr7:100472792-100472997	chr7	+	100472793	100472951	True	NM_001015072,NM_003302,NM_001128853,NM_001128852,NM_015908,NM_001128854	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,+,+	UFSP1,TRIP6,SRRT,SRRT,SRRT,SRRT	14438,-7894,-143,-143,-143,-143
chr6:82958833-82959594	chr6	+	82959026	82959316	True	NM_006670,NM_015525	chr6,chr6	+,-	TPBG,IBTK	113606,-1578
chr9:116861871-116862670	chr9	+	116862068	116862618	True	NM_138424,NM_032888	chr9,chr9	-,+	KIF12,COL27A1	-731,55612
chr6:18408374-18409531	chr6	+	18408735	18409262	True	NM_182757,NM_003472	chr6,chr6	+,-	RNF144B,DEK	-21205,-143936
chr13:103407465-103408461	chr13	+	103407469	103407693	True	NM_001159596,NM_001146197	chr13,chr13	+,-	BIVM,C13orf40	43705,3789
chr2:219190926-219191614	chr2	+	219190930	219191528	True	NM_022572,NM_022152	chr2,chr2	+,-	PNKD,TMBIM1	-3092,-33650
chr17:21456236-21456582	chr17	+	21456249	21456459	True	NM_001113434,NM_001194958	chr17,chr17	-,+	C17orf51,KCNJ18	-1308,-147852
chr16:53088746-53088957	chr16	+	53088756	53088952	True	NR_033920,NM_025134	chr16,chr16	-,+	LOC643714,CHD9	-447869,2
chr1:43831192-43832023	chr1	+	43831209	43831919	True	NM_022821,NM_001255	chr1,chr1	-,+	ELOVL1,CDC20	1830,-6634
chr1:29064271-29065162	chr1	+	29064322	29064926	True	NM_016258,NM_005644,NM_001173128,NM_001172828	chr1,chr1,chr1,chr1	+,-,+,+	YTHDF2,TAF12,YTHDF2,YTHDF2	-1237,-94718,-1240,-921
chr2:97427746-97427960	chr2	+	97427765	97427997	True	NR_024521,NM_020184	chr2,chr2	-,+	LMAN2L,CNNM4	-21952,-1177
chr11:60927776-60928285	chr11	+	60927780	60928273	True	NM_001079807,NM_017966	chr11,chr11	+,-	PGA3,VPS37C	42710,694
chr15:90437591-90437926	chr15	+	90437591	90437905	True	NR_023361,NM_005829,NM_198526,NR_037582	chr15,chr15,chr15,chr15	-,-,+,-	AP3S2,AP3S2,ZNF710,AP3S2	26,26,106846,26
chr19:40724531-40726374	chr19	+	40724704	40726375	True	NM_002446,NM_152479,NM_024877	chr19,chr19,chr19	+,-,-	MAP3K10,TTC9B,CNTD2	-27104,-398,6272
chr1:1258124-1258525	chr1	+	1258230	1258348	True	NM_017871,NM_152228,NM_001029885	chr1,chr1,chr1	-,+,+	CPSF3L,TAS1R3,GLTPD1	1748,8377,1794
chr7:112757550-112758179	chr7	+	112757734	112758228	True	NR_024412,NM_182597,NR_015442	chr7,chr7,chr7	-,+,-	LOC401397,C7orf53,LOC401397	459,-636730,459
chr7:4813596-4814514	chr7	+	4813612	4814294	True	NM_020144,NM_014855	chr7,chr7	-,+	PAPOLB,KIAA0415	87381,967
chr7:23287118-23287350	chr7	+	23287136	23287328	True	NM_006547,NM_001005340,NM_002510	chr7,chr7,chr7	-,+,+	IGF2BP3,GPNMB,GPNMB	222717,-871,-871
chr16:58162398-58162877	chr16	+	58162469	58162665	True	NM_013242,NM_002428	chr16,chr16	-,+	C16orf80,MMP15	681,-103245
chr8:146026613-146027021	chr8	+	146026616	146026727	True	NM_000973,NM_033301,NM_213605	chr8,chr8,chr8	-,-,+	RPL8,RPL8,ZNF517	-8811,-8887,-2406
chr3:100974526-100976195	chr3	+	100974534	100976102	True	NM_016247,NR_036433	chr3,chr3	-,+	IMPG2,FAM172B	63374,261613
chr4:9441821-9443541	chr4	+	9442142	9443560	True	NR_031688,NM_001040448	chr4,chr4	-,+	MIR548I2,DEFB131	114427,2699
chr3:183767414-183768509	chr3	+	183767831	183768339	True	NM_001023587,NM_130770	chr3,chr3	-,+	ABCC5,HTR3C	-32104,2495
chr5:30198279-30198590	chr5	+	30198278	30198606	True	NM_004932,NM_001100412	chr5,chr5	+,-	CDH6,DROSHA	995189,1333726
chr16:1757535-1758061	chr16	+	1757705	1758053	True	NM_002513,NM_015133,NM_001040439	chr16,chr16,chr16	-,+,+	NME3,MAPK8IP3,MAPK8IP3	63707,-1535,-1535
chr1:151736278-151736637	chr1	+	151736315	151736659	True	NM_016178,NM_001134939,NM_031420	chr1,chr1,chr1	+,+,-	OAZ3,OAZ3,MRPL9	2471,-922,-275
chr19:48866427-48866685	chr19	+	48866465	48866619	True	NM_012451,NM_018273	chr19,chr19	+,-	SYNGR4,TMEM143	1031,617
chr10:91010103-91011212	chr10	+	91010191	91011072	True	NM_001127605,NM_001547,NM_000235	chr10,chr10,chr10	-,+,-	LIPA,IFIT2,LIPA	638,50633,638
chr5:49962607-49963260	chr5	+	49962606	49963266	True	NM_024615,NM_198449,NM_001178055,NM_001178056	chr5,chr5,chr5,chr5	+,-,+,+	PARP8,EMB,PARP8,PARP8	37,-225372,-924,37
chr5:23507737-23508775	chr5	+	23507801	23508684	True	NM_020227,NM_004061	chr5,chr5	+,-	PRDM9,CDH12	-128,-654070
chr16:85221220-85222195	chr16	+	85221220	85222126	True	NR_033984,NM_198491	chr16,chr16	+,-	LOC400548,FAM92B	-50515,-75106
chr19:2840392-2840631	chr19	+	2840424	2840497	True	NM_152791,NM_001172775,NM_003021	chr19,chr19,chr19	+,+,-	ZNF555,ZNF555,SGTA	935,935,-57070
chr2:6078436-6080103	chr2	+	6078520	6079841	True	NM_207315,NR_026832	chr2,chr2	-,+	CMPK2,LOC150622	926153,-5752
chr10:31269259-31270526	chr10	+	31269261	31270323	True	NM_001143769,NM_001174093	chr10,chr10	-,+	ZNF438,ZEB1	18181,337777
chr14:75183751-75185217	chr14	+	75184063	75185154	True	NM_015962,NM_001039479	chr14,chr14	+,-	FCF1,KIAA0317	-4281,-4256
chr17:19648364-19648733	chr17	+	19648392	19648780	True	NM_000382,NM_001135168,NM_001135167,NM_000691	chr17,chr17,chr17,chr17	+,-,-,-	ALDH3A2,ALDH3A1,ALDH3A1,ALDH3A1	-96379,42,195,3016
chr15:69744814-69745096	chr15	+	69744814	69745031	True	NR_030714,NM_213725,NM_001003	chr15,chr15,chr15	-,+,+	MIR629,RPLP1,RPLP1	626827,127,127
chr3:127880722-127882601	chr3	+	127880771	127882505	True	NM_021937,NM_003707	chr3,chr3	+,-	EEFSEC,RUVBL1	-8509,-38100
chr14:50549667-50550514	chr14	+	50549702	50550433	True	NM_001014830,NM_001663	chr14,chr14	-,+	C14orf183,ARF6	8979,-190017
chr2:43061462-43063084	chr2	+	43061702	43063028	True	NM_020744,NM_012205	chr2,chr2	+,-	MTA3,HAAO	-266082,-41951
chr10:123729841-123730944	chr10	+	123730054	123730746	True	NM_206861,NM_017615,NM_001167865	chr10,chr10,chr10	+,-,-	TACC2,NSMCE4A,NSMCE4A	17942,4048,4048
chr13:46036661-46037878	chr13	+	46036998	46037926	True	NM_001204476,NM_001010875,NM_031431	chr13,chr13,chr13	+,-,+	COG3,SLC25A30,COG3	1103,-44482,1103
chr20:42984662-42984910	chr20	+	42984719	42984955	True	NM_001080472,NM_001030003,NM_001030004,NM_175914	chr20,chr20,chr20,chr20	-,+,+,+	FITM2,HNF4A,HNF4A,HNF4A	-44830,-329,-329,-329
chr19:41868149-41869123	chr19	+	41868295	41868831	True	NM_030578,NM_001098825,NM_000660	chr19,chr19,chr19	-,+,-	B9D2,TMEM91,TGFB1	1297,1039,-8464
chr18:60977972-60979487	chr18	+	60977986	60979503	True	NM_002639,NM_000657,NM_000633	chr18,chr18,chr18	+,-,-	SERPINB5,BCL2,BCL2	164640,7160,7160
chr2:120280616-120280896	chr2	+	120280618	120280932	True	NM_001029996,NM_002980	chr2,chr2	+,-	PCDP1,SCTR	21092,1146
chr5:7867436-7868979	chr5	+	7867481	7868712	True	NM_002454,NM_024010,NR_036553,NM_024091	chr5,chr5,chr5,chr5	+,+,-,-	MTRR,MTRR,FASTKD3,FASTKD3	504,504,488,488
chr3:136550946-136551630	chr3	+	136551203	136551629	True	NM_005862,NM_025246	chr3,chr3	-,+	STAG1,TMEM22	-79958,-13399
chr2:54557932-54558203	chr2	+	54557976	54558052	True	NM_001003937,NM_001100396	chr2,chr2	-,+	TSPYL6,C2orf73	-74567,18
chr22:50943610-50944212	chr22	+	50943705	50944241	True	NM_014551,NM_033200,NM_001185011,NM_152299	chr22,chr22,chr22,chr22	+,-,+,+	NCAPH2,LMF2,NCAPH2,NCAPH2	2403,1944,2403,2403
chr17:80054076-80054289	chr17	+	80054184	80054314	True	NM_004104,NM_212492	chr17,chr17	-,+	FASN,GPS1	1842,-44472
chr1:149836916-149837217	chr1	+	149836919	149837013	True	NM_021059,NM_001034077,NM_003548	chr1,chr1,chr1	+,-,-	HIST2H3C,HIST2H4B,HIST2H4A	-12792,-4194,-4194
chr1:149836916-149837217	chr1	-	149799932	149800026	False	NM_001005464,NM_001034077,NM_003548	chr1,chr1,chr1	-,+,+	HIST2H3A,HIST2H4B,HIST2H4A	12792,4194,4194
chr22:45808212-45808903	chr22	+	45808631	45808821	True	NM_148674,NM_015653	chr22,chr22	-,+	SMC1B,RIBC2	729,752
chr14:19413019-19413710	chr22	-	16413735	16413909	False	NM_001005239,NR_001591	chr22,chr22	-,+	OR11H1,psiTPTE22	35945,668891
chr14:19413019-19413710	chr14	+	19413160	19413656	True	NM_001145442,NM_001013354	chr14,chr14	-,+	POTEM,OR11H12	606668,-35617
chr14:19413019-19413710	chr14	-	20146044	20146218	False	NM_001197287,NM_172194	chr14,chr14	-,+	OR11H2,OR4Q3	36323,69368
chrX:151896331-151898253	chrX	+	151896334	151898292	True	NM_001166387,NM_001166386,NM_001102576,NM_005367,NM_153478	chrX,chrX,chrX,chrX,chrX	-,-,+,-,+	MAGEA12,MAGEA12,CSAG1,MAGEA12,CSAG1	4942,4859,4935,4942,4935
chr22:40743352-40744543	chr22	+	40743388	40743996	True	NM_001123378,NM_000026,NM_020831	chr22,chr22,chr22	+,+,-	ADSL,ADSL,MKL1	-936,-936,288744
chr1:205362091-205362523	chr1	+	205362290	205362445	True	NM_002596,NM_001001552	chr1,chr1	+,-	CDK18,LEMD1	111238,28836
chr11:18337279-18338663	chr11	+	18337354	18338447	True	NM_007216,NM_005316,NM_001142307,NM_181508,NM_181507	chr11,chr11,chr11,chr11,chr11	-,+,+,-,-	HPS5,GTF2H1,GTF2H1,HPS5,HPS5	5331,5368,5368,5331,5331
chrX:13960435-13961972	chrX	+	13961099	13962017	True	NM_001001994,NM_003611	chrX,chrX	-,+	GPM6B,OFD1	-4268,-208318
chr18:3593459-3594171	chr18	+	3593503	3594096	True	NR_024101,NM_001003809	chr18,chr18	+,-	FLJ35776,DLGAP1	15,251250
chr8:125485477-125486571	chr8	+	125485507	125486563	True	NM_001146160,NM_007218	chr8,chr8	-,+	TATDN1,RNF139	64816,444
chr10:103347293-103347731	chr10	+	103347438	103347778	True	NM_015448,NM_013274,NR_033406,NM_001174085,NM_001174084	chr10,chr10,chr10,chr10,chr10	+,-,-,-,-	DPCD,POLL,POLL,POLL,POLL	310,299,299,299,299
chr12:108953764-108954608	chr12	+	108953788	108954512	True	NM_213595,NM_014301,NM_014706	chr12,chr12,chr12	+,+,-	ISCU,ISCU,SART3	1781,1781,703
chr13:88322974-88323450	chr13	+	88323071	88323373	True	NM_015567,NR_033829	chr13,chr13	+,-	SLITRK5,LOC642345	1496,1
chr19:11094403-11094878	chr19	+	11094409	11094749	True	NM_001128846,NM_001128847,NM_024029,NM_001128845,NM_001128848	chr19,chr19,chr19,chr19,chr19	+,+,-,+,+	SMARCA4,SMARCA4,YIPF2,SMARCA4,SMARCA4	78,78,-55052,78,78
chr22:25418892-25419641	chr22	+	25419385	25419645	True	NM_001001663,NM_001145206	chr22,chr22	-,+	TMEM211,KIAA1671	-84071,4295
chr5:140180973-140182138	chr5	+	140181242	140182176	True	NM_002109,NM_031495,NM_031500,NM_031497,NM_018907,NM_018906,NM_018905	chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,+,+,+,+,+,+	HARS,PCDHA2,PCDHA4,PCDHA3,PCDHA4,PCDHA3,PCDHA2	-110271,-6850,4495,-511,4495,-511,-6850
chr7:6674965-6675847	chr7	+	6675041	6675710	True	NM_017560,NM_006956	chr7,chr7	+,-	ZNF853,ZNF12	-19566,70906
chr4:140588285-140588733	chr4	+	140588345	140588736	True	NM_002413,NM_001204366,NM_001204367,NM_001204368,NM_030648	chr4,chr4,chr4,chr4,chr4	+,+,+,+,-	MGST2,MGST2,MGST2,MGST2,SETD7	-1475,-1475,-1475,-1475,-110768
chrX:71932656-71933698	chrX	+	71932785	71933633	True	NM_002637,NM_001122670,NM_001080851,NM_001172436	chrX,chrX,chrX,chrX	-,-,+,-	PHKA1,PHKA1,DMRTC1B,PHKA1	446,446,131242,446
chr5:94610486-94612373	chr5	+	94610721	94612362	True	NM_152548,NM_024717	chr5,chr5	+,-	FAM81B,MCTP1	114685,7976
chr3:171526465-171526705	chr3	+	171526474	171526606	True	NM_001130081,NM_002662,NM_001164436	chr3,chr3,chr3	-,-,+	PLD1,PLD1,TMEM212	1725,1725,34532
chr15:93450669-93451329	chr15	+	93450712	93451360	True	NM_001166286,NR_036136,NM_001271,NM_001042572	chr15,chr15,chr15,chr15	-,+,+,+	RGMA,MIR3175,CHD2,CHD2	165079,-3147,-7225,-7225
chr17:17401024-17401576	chr17	+	17401201	17401623	True	NM_016084,NM_018019,NM_001199989	chr17,chr17,chr17	-,+,-	RASD1,MED9,RASD1	-1492,-20952,-1492
chr3:139654599-139654844	chr3	+	139654614	139654766	True	NM_022131,NM_178177	chr3,chr3	+,-	CLSTN2,NMNAT3	-638,-257729
chr16:1481256-1481621	chr16	+	1481267	1481649	True	NM_001010878,NM_016111	chr16,chr16	-,+	C16orf91,TELO2	-1922,61702
chr15:65355918-65357025	chr15	+	65355925	65356883	True	NM_016563,NM_001101362	chr15,chr15	-,+	RASL12,KBTBD13	3555,12270
chr16:67283236-67284169	chr16	+	67283545	67284187	True	NM_013241,NM_004594	chr16,chr16	-,+	FHOD1,SLC9A5	-2120,-741
chr1:156585521-156586402	chr1	+	156585765	156586429	True	NM_182679,NM_021817	chr1,chr1	-,+	GPATCH4,HAPLN2	-14486,2656
chr16:30598449-30599258	chr16	+	30598928	30599292	True	NM_152458,NM_024031	chr16,chr16	-,+	ZNF785,PRR14	-1836,62948
chr17:1081780-1082223	chr17	+	1081871	1082093	True	NM_001164405,NM_021962,NM_001159746	chr17,chr17,chr17	+,-,-	BHLHA9,ABR,ABR	91764,1088,8573
chr7:53840592-53841241	chr7	+	53840664	53841254	True	NM_182595,NR_004422	chr7,chr7	+,-	POM121L12,HPVC1	-737366,428910
chr21:35285922-35286174	chr21	+	35285929	35286091	True	NM_032476,NM_001697	chr21,chr21	+,-	MRPS6,ATP5O	159731,2125
chr19:16739651-16739853	chr19	+	16739654	16739734	True	NM_004831,NM_024074	chr19,chr19	-,+	MED26,TMEM38A	-639,32203
chr4:119273627-119274114	chr4	+	119273765	119273891	True	NR_002963,NM_003619	chr4,chr4	+,-	SNORA24,PRSS12	-73471,81
chr3:143691339-143691562	chr3	+	143691345	143691551	True	NM_173653,NM_173552,NM_001134470	chr3,chr3,chr3	-,+,+	SLC9A9,C3orf58,C3orf58	-123972,-756,615
chr19:49544921-49545512	chr19	+	49545141	49545483	True	NR_004383,NM_033183,NM_033377,NM_033043	chr19,chr19,chr19,chr19	+,-,-,+	SNAR-G1,CGB8,CGB1,CGB5	-4924,6935,-4950,1618
chr5:140535213-140535770	chr5	+	140535237	140535683	True	NM_018939,NM_031947,NR_001280	chr5,chr5,chr5	+,-,+	PCDHB6,SLC25A2,PCDHB17	-5460,147979,-11
chr2:10260477-10260690	chr2	+	10260501	10260659	True	NM_001034,NM_001165931,NM_001037160	chr2,chr2,chr2	+,+,-	RRM2,RRM2,CYS1	2203,2035,-39963
chr12:56071887-56072224	chr12	+	56072181	56072243	True	NM_001144996,NM_152637	chr12,chr12	-,+	ITGA7,METTL7B	29493,3086
chr6:109774857-109775159	chr6	+	109774859	109775099	True	NM_001159291,NM_022765,NM_003080	chr6,chr6,chr6	-,-,+	MICAL1,MICAL1,SMPD2	2141,2141,-12979
chr7:2670474-2671055	chr7	+	2670936	2671102	True	NM_152743,NM_025250	chr7,chr7	-,+	BRAT1,TTYH3	-75544,500
chr2:128175264-128176119	chr2	+	128175264	128176034	True	NM_000312,NM_006609	chr2,chr2	+,-	PROC,MAP3K2	-39,-74494
chr16:3551246-3551502	chr16	+	3551260	3551508	True	NM_015041,NM_024793,NM_001080524	chr16,chr16,chr16	+,+,-	CLUAP1,CLUAP1,C16orf90	-348,8385,-5839
chr19:36399582-36400676	chr19	+	36399808	36400658	True	NM_001007469,NM_003332,NM_001173514,NM_001173515,NR_033390,NM_198125,NM_139239,NM_014266	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,-,-,-,-,-,+	HCST,TYROBP,TYROBP,TYROBP,TYROBP,TYROBP,NFKBID,HCST	-6481,-597,-597,-597,-597,-597,-8256,-6481
chr7:143104415-143105164	chr7	+	143104438	143104960	True	NR_033897,NM_005232	chr7,chr7	+,-	LOC285965,EPHA1	-1,1075
chr1:201795892-201796298	chr1	+	201796053	201796330	True	NM_012134,NM_018085	chr1,chr1	-,+	LMOD1,IPO9	119437,1957
chr22:50700728-50701465	chr22	+	50700804	50701234	True	NM_031454,NM_002969,NM_002751	chr22,chr22,chr22	+,-,-	SELO,MAPK12,MAPK11	-61447,-715,7595
chr14:91280375-91282192	chr14	+	91280388	91281852	True	NM_001010854,NM_001102366	chr14,chr14	-,+	TTC7B,C14orf159	959,298504
chr19:7953815-7954056	chr19	+	7953861	7954083	True	NM_025061,NR_033250	chr19,chr19	+,-	LRRC8E,LOC388499	-522,-8744
chr1:155100715-155101447	chr1	+	155100783	155101471	True	NM_004428,NM_018973,NM_018845,NM_001122839,NM_001122837,NM_182685	chr1,chr1,chr1,chr1,chr1,chr1	+,-,+,+,+,+	EFNA1,DPM3,SLC50A1,SLC50A1,SLC50A1,EFNA1	-485,11462,6816,6816,6816,-485
chr19:46195134-46195484	chr19	+	46195142	46195483	True	NM_177542,NM_001163377,NM_017659,NM_004597	chr19,chr19,chr19,chr19	-,+,+,-	SNRPD2,QPCTL,QPCTL,SNRPD2	11,257,257,11
chr8:7931363-7931831	chr8	+	7931380	7931786	True	NR_031689,NR_027424	chr8,chr8	-,+	MIR548I3,FAM66E	14875,-118896
chr8:7931363-7931831	chr8	-	12450233	12450639	False	NR_037492,NR_037495	chr8,chr8	-,+	MIR3926-1,MIR3926-2	134224,134106
chr8:7931363-7931831	chr8	-	7070792	7071074	False	NR_027000,NM_001164452	chr8,chr8	-,+	LOC349196,FAM90A14	50001,43351
chr8:7931363-7931831	chr8	-	7529391	7529673	False	NM_001136572,NM_001164452	chr8,chr8	-,+	FAM90A7,FAM90A14	-89216,43291
chr11:117051539-117051926	chr11	+	117051538	117051964	True	NM_001040455,NM_004716	chr11,chr11	+,-	SIDT2,PCSK7	-1650,50897
chr5:175977415-175977729	chr5	+	175977446	175977698	True	NM_014901,NM_017675,NM_001171976	chr5,chr5,chr5	-,+,+	RNF44,CDHR2,CDHR2	-13025,-1154,-7985
chr16:19897153-19897400	chr16	+	19897172	19897384	True	NM_153208,NM_016235	chr16,chr16	+,-	IQCK,GPRC5B	-169445,-1021
chr5:43453452-43455448	chr5	+	43453511	43454809	True	NM_022483,NM_012343	chr5,chr5	-,+	C5orf28,NNT	29233,147981
chr1:205197380-205197776	chr1	+	205197408	205197743	True	NM_014858,NM_199462	chr1,chr1	+,-	TMCC2,DSTYK	-421,-16681
chr2:176033472-176034606	chr2	+	176033597	176034599	True	NM_024583,NM_001880,NR_030630	chr2,chr2,chr2	+,-,-	SCRN3,ATF2,MIR933	-773202,-700,-1160
chr6:33285876-33286092	chr6_qbl_hap6	+	4518160	4518233	False	NM_001145338,NM_001350,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	-194,4864,4864,-28559,-401,-3750,-3750,-3750,4864
chr6:33285876-33286092	chr6_mcf_hap5	+	4759656	4759729	False	NM_001145338,NM_001350,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	-194,4861,4861,-28554,-401,-3750,-3750,-3750,4861
chr6:33285876-33286092	chr6_cox_hap2	+	4729728	4729801	False	NM_001145338,NM_001350,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	-194,4865,4865,-28556,-401,-3752,-3752,-3752,4865
chr6:33285876-33286092	chr6	+	33285913	33285986	True	NM_001145338,NM_001350,NR_024517,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	-194,4862,4862,4862,-28555,-401,-3749,-3749,-3749,4862
chr6:33285876-33286092	chr6_dbb_hap3	+	4567237	4567310	False	NM_001145338,NM_001350,NM_001141970,NM_001185181,NM_005453,NM_172209,NM_172208,NM_003190,NM_001141969	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,DAXX,PFDN6,ZBTB22,TAPBP,TAPBP,TAPBP,DAXX	-194,4865,4865,-28553,-401,-3750,-3750,-3750,4865
chr2:228196981-228197325	chr2	+	228196981	228197353	True	NM_020194,NM_024795	chr2,chr2	+,-	MFF,TM4SF20	-4810,46722
chr2:197041020-197042825	chr2	+	197041050	197042340	True	NM_001080539,NM_004226	chr2,chr2	+,-	CCDC150,STK17B	462015,-4714
chr7:43794096-43794730	chr7	+	43794203	43794587	True	NM_000712,NM_018224	chr7,chr7	+,-	BLVRA,C7orf44	3684,-25120
chr5:140090857-140092059	chr5	+	140090859	140091942	True	NR_026704,NM_002109,NR_026703	chr5,chr5,chr5	+,-,+	VTRNA1-2,HARS,VTRNA1-1	6568,-19888,-49
chr8:19798460-19800400	chr8	+	19798741	19800357	True	NM_001135691,NM_000237	chr8,chr8	-,+	SLC18A1,LPL	240410,-2214
chr9:22010688-22011079	chr9	+	22010804	22011083	True	NR_003529,NM_004936,NM_078487	chr9,chr9,chr9	+,-,-	CDKN2B-AS1,CDKN2B,CDKN2B	-16074,-1492,-1492
chr16:31042791-31043496	chr16	+	31042807	31043523	True	NM_004604,NM_052874	chr16,chr16	+,-	STX4,STX1B	1379,-20978
chr6:170125546-170125795	chr6	+	170125614	170125822	True	NM_018288,NM_133325,NM_001029863	chr6,chr6,chr6	-,-,+	PHF10,PHF10,C6orf120	-1508,-1508,-23408
chr2:180353030-180353864	chr2	+	180353192	180353852	True	NM_001113398,NM_019091	chr2,chr2	-,+	ZNF385B,PLEKHA3	73513,-1008052
chr2:69239869-69240357	chr2	+	69239889	69240331	True	NM_032208,NM_182536,NM_053034,NM_018153	chr2,chr2,chr2,chr2	+,-,+,+	ANTXR1,GKN2,ANTXR1,ANTXR1	-56,-59787,-56,-56
chr9:132567587-132567915	chr9	+	132567743	132567943	True	NM_000113,NM_014506	chr9,chr9	-,+	TOR1A,TOR1B	18548,-2362
chr11:73355958-73356543	chr11	+	73356099	73356581	True	NM_001130036,NM_001130034,NM_001130035,NM_001130033,NM_021200,NM_015159	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,-	PLEKHB1,PLEKHB1,PLEKHB1,PLEKHB1,PLEKHB1,FAM168A	3153,2012,2012,641,641,-46871
chr5:145895162-145895555	chr5	+	145895218	145895518	True	NM_006706,NM_194251	chr5,chr5	+,-	TCERG1,GPR151	-68396,208
chr1:23040721-23041255	chr1	+	23040811	23041217	True	NR_036214,NM_017449,NM_004442	chr1,chr1,chr1	-,+,+	MIR4253,EPHB2,EPHB2	148552,-3531,-3531
chr6:86159288-86159530	chr6	+	86159360	86159452	True	NM_001204813,NM_002526,NM_020468	chr6,chr6,chr6	+,+,-	NT5E,NT5E,SNX14	-118,-118,144227
chr9:136285183-136287171	chr9	+	136285512	136287010	True	NR_024514,NM_020385,NM_139026,NM_139027,NM_139025	chr9,chr9,chr9,chr9,chr9	+,-,+,+,+	ADAMTS13,REXO4,ADAMTS13,ADAMTS13,ADAMTS13	-6104,-2348,109,109,109
chr16:86546372-86546626	chr16	+	86546519	86546623	True	NM_001451,NR_036444,NR_033925	chr16,chr16,chr16	+,-,-	FOXF1,LOC400550,LOC400550	-2437,-4053,-4053
chr11:118663871-118664272	chr11	+	118663870	118664315	True	NM_001716,NM_004397	chr11,chr11	+,-	CXCR5,DDX6	90225,-1898
chr7:128824616-128826342	chr7	+	128824739	128825973	True	NM_005631,NR_034053	chr7,chr7	+,-	SMO,TNPO3	2739,-129512
chr18:45563310-45564577	chr18	+	45563502	45564398	True	NM_001142397,NM_001039360	chr18,chr18	+,-	CTIF,ZBTB7C	501028,99332
chr8:38852362-38853605	chr8	+	38852456	38853504	True	NM_031940,NM_003816,NM_078473,NR_027638,NR_027639,NM_001024380,NM_001024381,NR_027878	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,+,-,+,+,-,-,+	TM2D2,ADAM9,TM2D2,ADAM9,ADAM9,TM2D2,TM2D2,ADAM9	587,1000,587,1000,1000,587,587,1000
chr12:49715251-49716260	chr12	+	49715376	49716290	True	NM_001100620,NM_001008223,NM_005480	chr12,chr12,chr12	+,-,+	TROAP,C1QL4,TROAP	680,14731,680
chr18:606801-607287	chr18	+	606861	606943	True	NM_014410,NM_199167,NM_001012716	chr18,chr18,chr18	+,+,-	CLUL1,CLUL1,C18orf56	-9914,9756,51457
chr16:3289049-3289285	chr16	+	3289226	3289291	True	NR_002169,NM_003454,NM_001145447,NM_001145446,NM_198087,NM_001145448,NM_198088	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,-,-,-,-	OR1F2P,ZNF200,ZNF200,ZNF200,ZNF200,ZNF200,ZNF200	-23720,-4040,-4040,-3769,-3769,-3770,-3770
chr2:173030915-173031326	chr2	+	173031068	173031210	True	NM_178120,NM_004405	chr2,chr2	+,-	DLX1,DLX2	-80919,-63590
chr8:133493529-133493740	chr8	+	133493625	133493761	True	NM_004519,NM_198513	chr8,chr8	-,+	KCNQ3,PHF20L1	-621,293842
chr12:112574380-112574748	chr12	+	112574497	112574756	True	NM_024953,NM_006700	chr12,chr12	-,+	NAA25,TRAFD1	-27862,-11199
chr10:74856500-74856730	chr10	+	74856505	74856731	True	NM_001142595,NM_001017962,NM_001142596,NM_000917,NM_015901	chr10,chr10,chr10,chr10,chr10	-,-,-,-,+	P4HA1,P4HA1,P4HA1,P4HA1,NUDT13	51,51,51,51,13478
chr12:81331144-81331719	chr12	+	81331261	81331718	True	NR_030349,NM_024560,NM_004664	chr12,chr12,chr12	-,+,-	MIR618,ACSS3,LIN7A	-1649,140090,26
chr6:57091514-57092364	chr6	+	57091610	57092091	True	NM_016277,NM_183227,NM_004282	chr6,chr6,chr6	-,-,+	RAB23,RAB23,BAG2	-4532,-5353,-54563
chr15:59279007-59279444	chr15	+	59279233	59279490	True	NM_024755,NM_017610	chr15,chr15	-,+	SLTM,RNF111	-53381,374
chr17:7578468-7579439	chr17	+	7578570	7579388	True	NM_001126116,NM_001126117,NM_001126115,NM_001143990	chr17,chr17,chr17,chr17	-,-,-,+	TP53,TP53,TP53,WRAP53	151,151,151,10000
chr8:76289211-76289914	chr8	+	76289369	76289879	True	NM_004133,NM_020647	chr8,chr8	+,-	HNF4G,JPH1	162323,-1055807
chr2:135619897-135620108	chr2	+	135619901	135620145	True	NM_138326,NR_036549	chr2,chr2	+,-	ACMSD,LOC100129961	-23779,56081
chr10:105677331-105677717	chr10	+	105677378	105677705	True	NM_024928,NM_014720	chr10,chr10	-,+	OBFC1,SLK	391,49764
chr7:2357246-2358025	chr7	+	2357249	2357665	True	NM_001037283,NM_013321	chr7,chr7	+,-	EIF3B,SNX8	36808,-3150
chr1:246894284-246895780	chr1	+	246894377	246895696	True	NM_022366,NM_016002	chr1,chr1	-,+	TFB2M,SCCPDH	-164812,-7050
chr21:15545778-15546965	chr21	+	15545799	15546495	True	NM_144770,NM_198996	chr21,chr21	+,-	RBM11,LIPI	41970,32809
chr10:97513987-97515850	chr10	+	97514099	97515784	True	NM_001164178,NM_001164179,NM_001776,NM_001164183,NM_001164182,NM_001164181,NM_001143973	chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,+,-	ENTPD1,ENTPD1,ENTPD1,ENTPD1,ENTPD1,ENTPD1,TCTN3	138,-112,-112,-112,-112,138,-60199
chr21:45772288-45772617	chr21	+	45772357	45772659	True	NM_003307,NM_004928	chr21,chr21	+,-	TRPM2,C21orf2	824,-13072
chr5:175230949-175231612	chr5	+	175231178	175231602	True	NM_032361,NM_006650	chr5,chr5	-,+	THOC3,CPLX2	163993,-7620
chr13:42029161-42029791	chr13	+	42029198	42029832	True	NM_014059,NM_004294	chr13,chr13	+,-	C13orf15,MTRF1	1709,-191485
chr8:144491368-144491575	chr8	+	144491495	144491583	True	NM_201589,NM_052924	chr8,chr8	-,+	MAFA,RHPN1	21071,-40535
chr17:6458971-6459186	chr17	+	6458993	6459091	True	NM_001165966,NM_031220,NM_032731	chr17,chr17,chr17	-,-,+	PITPNM3,PITPNM3,TXNDC17	836,836,85130
chr22:24096538-24097225	chr22	+	24096563	24097035	True	NM_013378,NM_021916,NM_182520	chr22,chr22,chr22	-,-,+	VPREB3,ZNF70,C22orf15	-1,-3284,8172
chr7:1097825-1098104	chr7	+	1097857	1098061	True	NM_138445,NR_029898	chr7,chr7	+,-	GPR146,MIR339	-767,-35195
chr12:52760994-52762775	chr12	+	52761526	52762778	True	NM_002284,NM_002283	chr12,chr12	+,-	KRT86,KRT85	-65928,-217
chr15:40860287-40861741	chr15	+	40860685	40861617	True	NM_052849,NM_001080792,NM_001080791,NM_152260	chr15,chr15,chr15,chr15	-,-,-,+	C15orf57,C15orf57,C15orf57,RPUSD2	-3433,-3433,-3433,-81
chr12:56233331-56234592	chr12	+	56233558	56234504	True	NR_036479,NM_002429	chr12,chr12	+,-	LOC440104,MMP19	-10217,2281
chr8:20067928-20069460	chr8	+	20068067	20069186	True	NM_001693,NM_003053	chr8,chr8	+,-	ATP6V1B2,SLC18A1	-13414,-27350
chr2:206547254-206547467	chr2	+	206547260	206547390	True	NM_201266,NM_201267,NM_201264,NM_201279,NM_003872,NM_018534,NM_017759	chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,+,+,-	NRP2,NRP2,NRP2,NRP2,NRP2,NRP2,INO80D	-87,-87,-87,-87,-87,-87,403566
chr8:7292023-7293375	chr8	+	7292242	7293385	True	NM_018661,NM_001040703,NM_001081551	chr8,chr8,chr8	-,+,-	DEFB103B,DEFB105B,DEFB103A	-4560,51857,-4372
chr8:7292023-7293375	chr8	-	7733210	7733853	False	NM_152250,NM_018661,NM_001081551	chr8,chr8,chr8	-,+,+	DEFB105A,DEFB103B,DEFB103A	-51850,5060,4872
chr6:26271574-26272635	chr6	+	26271702	26272458	True	NM_003525,NM_003534	chr6,chr6	+,-	HIST1H2BI,HIST1H3G	745,-90
chr11:3819245-3819650	chr11	+	3819317	3819547	True	NR_027018,NM_005387,NM_139131,NM_139132,NR_027017,NR_027014,NR_027015,NM_001145438,NM_016320	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,-,-,-,+,+,+,+,-	PGAP2,NUP98,NUP98,NUP98,PGAP2,PGAP2,PGAP2,PGAP2,NUP98	9692,-295,-295,-295,-178,-414,-236,-319,-295
chr11:9444300-9446145	chr11	+	9444558	9445913	True	NR_002962,NR_036539	chr11,chr11	+,-	SNORA23,LOC644656	4399,36393
chr3:140415623-140416684	chr3	+	140415784	140416434	True	NM_178177,NM_152616	chr3,chr3	-,+	NMNAT3,TRIM42	-1018899,-18976
chr7:6096116-6096854	chr7	+	6096259	6096512	True	NM_001134335,NM_006303,NM_014413	chr7,chr7,chr7	-,+,-	EIF2AK1,AIMP2,EIF2AK1	2407,-47436,2407
chr3:36779070-36780078	chr3	+	36779080	36779772	True	NM_000249,NM_033403	chr3,chr3	+,-	MLH1,DCLK3	255068,1630
chr13:80912959-80913346	chr13	+	80912963	80913213	True	NM_019080,NM_005842	chr13,chr13	+,-	NDFIP2,SPRY2	-857755,1923
chr3:58323989-58324503	chr3	+	58324355	58324422	True	NM_017771,NR_033384	chr3,chr3	+,-	PXK,PDHB	-5796,95201
chr15:75228224-75228486	chr15	+	75228243	75228362	True	NM_002435,NM_004255	chr15,chr15	+,-	MPI,COX5A	-45891,2184
chr11:71928360-71928825	chr11	+	71928434	71928708	True	NM_001113534,NM_005169,NM_001567,NM_000803,NM_001113535,NM_001113536	chr11,chr11,chr11,chr11,chr11,chr11	+,-,+,+,+,+	FOLR2,PHOX2A,INPPL1,FOLR2,FOLR2,FOLR2	-667,26562,7173,-667,-667,-667
chr11:85379900-85381438	chr11	+	85380224	85381197	True	NR_028026,NR_028027,NR_028024,NR_028025,NM_032273,NM_001039618	chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,+,-	CREBZF,CREBZF,CREBZF,CREBZF,TMEM126A,CREBZF	-4042,-4042,-4042,-4042,-21319,-4042
chr21:47513219-47514534	chr21	+	47513324	47514550	True	NM_001849,NM_058174,NM_058175,NM_006657	chr21,chr21,chr21,chr21	+,+,+,-	COL6A2,COL6A2,COL6A2,FTCD	3482,3482,3482,60981
chr16:79828322-79828531	chr16	+	79828394	79828558	True	NM_005360,NM_130897	chr16,chr16	-,+	MAF,DYNLRB2	-193772,746295
chr15:44827849-44828300	chr15	+	44828046	44828336	True	NR_034171,NR_034170,NM_003758	chr15,chr15,chr15	-,-,+	LOC645212,LOC645212,EIF3J	812,835,929
chr17:13928791-13929213	chr17	+	13928829	13929191	True	NR_003261,NM_001007530	chr17,chr17	+,-	CDRT15P,CDRT15	-1065,211009
chr17:13928791-13929213	chr17	-	14138985	14139151	False	NM_001007530,NM_006041	chr17,chr17	-,+	CDRT15,HS3ST3B1	1049,65354
chr1:94919171-94921040	chr1	+	94919850	94920711	True	NM_002858,NM_001178096	chr1,chr1	+,-	ABCD3,F3	-35976,86769
chr6:26240973-26241417	chr6	+	26241028	26241346	True	NM_003547,NM_021018,NM_005320,NM_003540	chr6,chr6,chr6,chr6	-,-,-,+	HIST1H4G,HIST1H3F,HIST1H1D,HIST1H4F	5915,9545,-5812,-425
chr7:101003381-101004319	chr7	+	101003917	101003977	True	NM_022777,NM_133457	chr7,chr7	-,+	RABL5,EMID2	-38824,2144
chr11:63449373-63449848	chr11	+	63449523	63449894	True	NM_201428,NM_201429,NM_006054,NM_015459,NM_201430	chr11,chr11,chr11,chr11,chr11	+,+,+,-,+	RTN3,RTN3,RTN3,ATL3,RTN3	-652,-652,-652,-10440,-652
chr5:159543819-159544186	chr5	+	159544124	159544190	True	NM_001130864,NM_052927,NM_001130958	chr5,chr5,chr5	-,-,+	PWWP2A,PWWP2A,FABP6	2312,2312,70183
chr12:861178-861671	chr12	+	861220	861592	True	NM_001184985,NM_016533,NM_018979,NM_213655,NM_014823	chr12,chr12,chr12,chr12,chr12	+,-,+,+,+	WNK1,NINJ2,WNK1,WNK1,WNK1	496,-88465,496,496,496
chr2:27311585-27313413	chr2	+	27311728	27313245	True	NM_006488,NM_000221,NM_001134693	chr2,chr2,chr2	+,+,-	KHK,KHK,OST4	-2168,-2168,-17161
chr2:175848277-175849188	chr2	+	175848579	175849022	True	NM_001025201,NM_024583	chr2,chr2	-,+	CHN1,SCRN3	21210,-588186
chr1:109616594-109617269	chr1	+	109616606	109616666	True	NM_020141,NM_005645	chr1,chr1	+,-	TMEM167B,TAF13	16736,2008
chr11:8190845-8191606	chr11	+	8190956	8191592	True	NM_177972,NM_024557,NM_001135109	chr11,chr11,chr11	+,-,-	TUB,RIC3,RIC3	-88098,-366,-366
chr19:51979242-51980818	chr19	+	51979561	51980855	True	NM_001080405,NM_014442	chr19,chr19	+,-	CEACAM18,SIGLEC8	-126,-17853
chr1:32804443-32804798	chr1	+	32804476	32804772	True	NM_023009,NM_052841	chr1,chr1	-,+	MARCKSL1,TSSK3	-2642,23089
chr6:44223305-44224035	chr6	+	44223527	44223887	True	NM_007355,NM_004556,NM_178148	chr6,chr6,chr6	+,-,-	HSP90AB1,NFKBIE,SLC35B2	-8729,9690,1448
chr8:95485715-95486078	chr8	+	95485861	95486133	True	NM_001205262,NM_012415,NM_001034915	chr8,chr8,chr8	-,-,+	RAD54B,RAD54B,ESRP1	1266,1266,167230
chr6:5271954-5272960	chr6	+	5272280	5273008	True	NM_006567,NM_001164840	chr6,chr6	+,-	FARS2,LYRM4	-10748,-11108
chr16:324014-324231	chr16	+	324065	324259	True	NM_006849,NM_183337,NM_001176,NM_003834	chr16,chr16,chr16,chr16	+,-,+,-	PDIA2,RGS11,ARHGDIG,RGS11	8858,1705,6346,1705
chr2:231731129-231732532	chr2	+	231731345	231732281	True	NM_001012516,NM_030926,NM_001012514,NM_005683	chr2,chr2,chr2,chr2	+,+,+,-	ITM2C,ITM2C,ITM2C,GPR55	-1776,-1776,-1776,57710
chr7:25223123-25224049	chr7	+	25223162	25224060	True	NM_138811,NM_016447	chr7,chr7	-,+	C7orf31,MPP6	-3345,-610136
chr4:81118544-81118867	chr4	+	81118585	81118913	True	NM_001099403,NM_001145794	chr4,chr4	+,-	PRDM8,ANTXR2	21,-124108
chr6:71122055-71122676	chr6	+	71122187	71122572	True	NM_020819,NM_001851,NM_001105531	chr6,chr6,chr6	+,-,+	FAM135A,COL9A1,FAM135A	534,-109401,534
chr1:85513313-85513537	chr1	+	85513318	85513515	True	NM_145172,NM_018298	chr1,chr1	+,-	WDR63,MCOLN3	14477,704
chr8:42197276-42198092	chr8	+	42197359	42197949	True	NM_014420,NM_002690	chr8,chr8	-,+	DKK4,POLB	36785,-1380
chr5:147473713-147474624	chr5	+	147474002	147474596	True	NM_006846,NM_206966	chr5,chr5	+,-	SPINK5,C5orf46	-30519,-187901
chrX:142112573-142114484	chrX	+	142112579	142114274	True	NM_001009613,NM_001009609	chrX,chrX	+,-	SPANXN4,SPANXN3	-82,491083
chr1:37922151-37923003	chr1	+	37922426	37922974	True	NM_022756,NM_025079	chr1,chr1	-,+	MEAF6,ZC3H12A	57440,17144
chr12:108909657-108910307	chr12	+	108909669	108910333	True	NM_007076,NM_014706	chr12,chr12	+,-	FICD,SART3	-669,44882
chr7:74868464-74869404	chr7	+	74868472	74868749	True	NM_001145064,NR_003664	chr7,chr7	-,+	GATSL2,SPDYE8P	-1131,67783
chr7:74868464-74869404	chr7	-	72567908	72568185	False	NR_002206,NR_003664,NR_003580	chr7,chr7,chr7	+,-,+	GTF2IP1,SPDYE8P,LOC100093631	840,-67599,826
chr7:74868464-74869404	chr7	+	74654285	74654562	False	NR_002206,NM_001003795,NR_003580	chr7,chr7,chr7	-,+,-	GTF2IP1,GTF2IRD2B,LOC100093631	-840,-145989,-826
chr7:74868464-74869404	chr7	-	74378318	74378595	False	NM_001025202,NM_001145063	chr7,chr7	-,+	STAG3L2,GATSL1	-71587,487
chr7:5939789-5940998	chr7	+	5939807	5940793	True	NM_001099697,NM_015622	chr7,chr7	-,+	RSPH10B2,CCZ1	69579,-1526
chr7:5939789-5940998	chr7	-	6863621	6864475	False	NM_198097,NM_173565	chr7,chr7	-,+	C7orf28B,RSPH10B	1510,-69934
chrX:133119874-133120256	chrX	+	133119888	133120304	True	NM_001164617,NM_001101357,NM_004484,NM_001164619,NM_001164618	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	GPC3,CCDC160,GPC3,GPC3,GPC3	-215,250772,-215,-215,-215
chr19:21544101-21544459	chr19	+	21544226	21544392	True	NR_027130,NM_021269	chr19,chr19	+,-	ZNF738,ZNF708	-2545,-32014
chr5:87974502-87974777	chr5	+	87974555	87974775	True	NR_024383,NR_015436,NM_022650,NR_024384	chr5,chr5,chr5,chr5	-,-,+,-	LOC645323,LOC645323,RASA1,LOC645323	-293,5895,-1409840,-5409
chr5:36610423-36610918	chr5	+	36610422	36610920	True	NM_001166695,NM_001166696,NM_004172,NM_145000	chr5,chr5,chr5,chr5	+,+,+,-	SLC1A3,SLC1A3,SLC1A3,RANBP3L	-2044,-4018,-4018,-308411
chr1:241841712-241843274	chr1	+	241841821	241843309	True	NM_014322,NM_144625	chr1,chr1	-,+	OPN3,WDR64	-38120,-26298
chr2:8115008-8116959	chr2	+	8115078	8116879	True	NM_002166,NR_015405	chr2,chr2	+,-	ID2,LOC339788	705233,117
chr2:169755206-169755420	chr2	+	169755213	169755461	True	NM_001081686,NM_020675,NM_021176	chr2,chr2,chr2	+,-,+	G6PC2,SPC25,G6PC2	2288,-8269,2288
chr12:21752585-21753095	chr12	+	21752587	21753048	True	NM_030572,NM_021957	chr12,chr12	+,-	C12orf39,GYS2	-73391,4796
chr6:39196471-39196875	chr6	+	39196515	39196797	True	NM_003740,NM_002062	chr6,chr6	-,+	KCNK5,GLP1R	504,-180009
chr22:18256404-18256682	chr22	+	18256472	18256710	True	NM_001196,NR_036168,NM_197967,NM_197966,NM_015367	chr22,chr22,chr22,chr22,chr22	-,-,-,-,+	BID,MIR3198,BID,BID,BCL2L13	598,-9447,598,119,-135038
chr4:5890293-5890537	chr4	+	5890405	5890515	True	NM_001313,NM_153717,NM_001014809	chr4,chr4,chr4	-,+,-	CRMP1,EVC,CRMP1	-90,-177532,4320
chr1:229823657-229824777	chr1	+	229823851	229824815	True	NM_001025247,NM_014777	chr1,chr1	-,+	TAF5L,URB2	-62057,-61921
chr2:168685965-168686755	chr2	+	168686136	168686776	True	NM_020981,NM_013233	chr2,chr2	+,-	B3GALT1,STK39	-11006,417379
chr11:9290047-9290780	chr11	+	9290046	9290125	True	NM_006391,NM_015213	chr11,chr11	+,-	IPO7,DENND5A	116043,-3175
chr19:51982493-51982987	chr19	+	51982554	51982966	True	NM_033329,NM_001080405,NM_014442	chr19,chr19,chr19	-,+,-	SIGLEC12,CEACAM18,SIGLEC8	20731,-2767,-20846
chr8:128429047-128429938	chr8	+	128429565	128429685	True	NM_001159542,NR_024393	chr8,chr8	+,-	POU5F1B,LOC727677	-1770,64749
chr8:15087561-15089424	chr8	+	15087563	15089477	True	NM_139167,NM_006765	chr8,chr8	-,+	SGCZ,TUSC3	6369,308118
chr12:112448852-112450380	chr12	+	112449183	112450433	True	NM_001193453,NM_138341,NM_006817,NM_001193531,NM_001034025	chr12,chr12,chr12,chr12,chr12	-,-,+,-,+	TMEM116,TMEM116,ERP29,TMEM116,ERP29	650,650,718,650,718
chr2:25017123-25018932	chr2	+	25017166	25018932	True	NM_001013663,NM_001199803,NM_024322	chr2,chr2,chr2	-,+,+	C2orf79,CENPO,CENPO	-915,-1042,-886
chr17:34254366-34255688	chr17	+	34254661	34255447	True	NM_001163124,NM_001163125,NM_001034836,NM_001163120,NM_001163121,NM_001163122,NM_001163130,NM_003487,NM_145654,NR_027999,NR_027998,NR_027997,NR_027996,NR_028000	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,-,-,+,-,-,-,-,-,-	RDM1,RDM1,RDM1,RDM1,RDM1,RDM1,RDM1,TAF15,RDM1,RDM1,RDM1,RDM1,RDM1,RDM1	1906,1906,2383,2383,2383,1906,1906,-118235,2383,1906,2383,2383,2383,1906
chr4:57058480-57058905	chr4	+	57058600	57058747	True	NM_181806,NM_020722	chr4,chr4	-,+	AASDH,KIAA1211	194954,-22302
chr19:18117658-18118296	chr19	+	18117684	18118316	True	NM_015683,NM_001025604,NM_005535	chr19,chr19,chr19	+,+,-	ARRDC2,ARRDC2,IL12RB1	660,-5791,79431
chr5:135364658-135364860	chr5	+	135364677	135364771	True	NM_000358,NR_030583	chr5,chr5	+,-	TGFBI,VTRNA2-1	-144,51565
chr1:206227643-206227959	chr1	+	206227698	206227887	True	NM_000707,NM_001007544	chr1,chr1	+,-	AVPR1B,C1orf186	-3466,60811
chr19:19147114-19147353	chr19	+	19147177	19147336	True	NM_001017392,NM_014884,NM_033415,NM_001199196	chr19,chr19,chr19,chr19	-,-,+,+	SUGP2,SUGP2,ARMC6,ARMC6	-2797,-2797,-2848,-2848
chr11:66053748-66055102	chr11	+	66054165	66054993	True	NM_020470,NM_153266,NM_182553	chr11,chr11,chr11	-,+,+	YIF1A,TMEM151A,CNIH2	1695,4379,-8520
chr3:155882486-155882786	chr3	+	155882490	155882793	True	NM_003471,NM_004733	chr3,chr3	+,-	KCNAB1,SLC33A1	-21790,-310242
chr21:45661791-45662107	chr21	+	45661893	45662029	True	NM_000383,NM_015259	chr21,chr21	+,-	AIRE,ICOSLG	43733,-1059
chr7:124571217-124571523	chr7	+	124571221	124571400	True	NR_003102,NR_003103,NM_001042594,NR_003104,NM_015450,NM_001174046	chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,+	POT1,POT1,POT1,POT1,POT1,SPAM1	-1184,-1184,-1184,-1184,-1184,-1005364
chr9:77642022-77642321	chr9	+	77642021	77642360	True	NM_012383,NM_152420	chr9,chr9	+,-	OSTF1,C9orf41	61037,1001
chr19:40264369-40265300	chr19	+	40264446	40265074	True	NM_001828,NM_001143832	chr19,chr19	-,+	CLC,LEUTX	-35778,2159
chr2:26256146-26256352	chr2	+	26256149	26256375	True	NM_002254,NM_016131	chr2,chr2	-,+	KIF3C,RAB10	-50706,353
chr13:23490005-23490363	chr13	+	23490027	23490409	True	NM_000231,NR_033774	chr13,chr13	+,-	SGCG,BASP1P1	264650,-17707
chr11:57186285-57186553	chr11	+	57186451	57186531	True	NM_199329,NM_014096,NM_178570,NM_017611	chr11,chr11,chr11,chr11	-,-,+,-	SLC43A3,SLC43A3,RTN4RL2,SLC43A3	8113,8042,41807,8572
chr3:142450519-142451229	chr3	+	142450532	142451267	True	NM_003304,NM_001184	chr3,chr3	+,-	TRPC1,ATR	-7318,-152864
chr14:69863819-69864027	chr14	+	69863961	69864049	True	NM_004450,NM_018375	chr14,chr14	-,+	ERH,SLC39A9	1022,1357
chr16:56899392-56899763	chr16	+	56899399	56899703	True	NM_000339,NM_001126108,NR_029680,NM_001126107,NM_005950	chr16,chr16,chr16,chr16,chr16	+,+,+,+,-	SLC12A3,SLC12A3,MIR138-2,SLC12A3,MT1G	-331,-331,-7020,-331,-197422
chr15:91413719-91413937	chr15	+	91413723	91413923	True	NM_198527,NM_002569	chr15,chr15	-,+	HDDC3,FURIN	61901,-1889
chr5:140625418-140625863	chr5	+	140625423	140625785	True	NM_018935,NR_001282,NM_031947	chr5,chr5,chr5	+,+,-	PCDHB15,PCDHB19P,SLC25A2	-327,-5785,57877
chr10:74031738-74032491	chr10	+	74031846	74032457	True	NM_001198800,NM_019058	chr10,chr10	-,+	ASCC1,DDIT4	-55663,1219
chr9:115819535-115821096	chr9	+	115819624	115821031	True	NM_003408,NR_024366	chr9,chr9	-,+	ZFP37,NCRNA00256A	-628,54144
chr18:28621328-28621771	chr18	+	28621364	28621760	True	NM_001941,NM_001942,NM_024423	chr18,chr18,chr18	-,+,-	DSC3,DSG1,DSC3	1071,276291,1071
chr4:96461028-96461478	chr4	+	96461027	96461526	True	NM_005390,NM_003728	chr4,chr4	+,-	PDHA2,UNC5C	299712,8893
chr10:51549128-51550072	chr10	+	51549235	51549794	True	NM_001077685,NM_138634,NM_002443	chr10,chr10,chr10	-,+,+	AGAP7,MSMB,MSMB	-62908,19,19
chr5:55776375-55776603	chr5	+	55776384	55776612	True	NM_024669,NM_005921	chr5,chr5	-,+	ANKRD55,MAP3K1	-247198,334287
chr4:22749172-22749897	chr4	+	22749192	22749938	True	NM_145290,NM_020973	chr4,chr4	-,+	GPR125,GBA3	-231520,-54695
chr22:24990178-24990778	chr22	+	24990243	24990807	True	NM_005265,NM_207644,NM_001032364	chr22,chr22,chr22	+,-,+	GGT1,C22orf36,GGT1	8372,-1208,8316
chr2:101435474-101435777	chr2	+	101435499	101435694	True	NM_001102426,NM_002518	chr2,chr2	-,+	TBC1D8,NPAS2	332202,918
chr7:65113267-65114413	chr7	+	65113379	65114428	True	NM_000181,NR_027392	chr7,chr7	-,+	GUSB,INTS4L2	332923,-653
chr7:65113267-65114413	chr7	+	64602200	64603176	False	NR_027393,NM_001007253	chr7,chr7	+,-	INTS4L1,ERV3	-648,-135076
chr7:65113267-65114413	chr7	-	64972299	64973276	False	NM_152626,NM_000181	chr7,chr7	+,-	ZNF92,GUSB	-133583,474075
chr7:65113267-65114413	chr7	-	65018020	65019071	False	NM_000181,NR_027392	chr7,chr7	-,+	GUSB,INTS4L2	428280,93705
chr6:75915169-75915405	chr6	+	75915180	75915442	True	NM_004370,NM_080645,NM_001100409	chr6,chr6,chr6	-,-,+	COL12A1,COL12A1,SENP6	231,231,396179
chr8:40753449-40754242	chr8	+	40753527	40754126	True	NM_001174124,NM_024645,NM_001135731	chr8,chr8,chr8	+,-,-	GOLGA7,ZMAT4,ZMAT4	593954,1267,1267
chr2:27578309-27579335	chr2	+	27578417	27579325	True	NM_001035521,NM_001521,NM_014748	chr2,chr2,chr2	-,-,+	GTF3C2,GTF3C2,SNX17	593,593,14063
chr11:85956298-85956906	chr11	+	85956379	85956872	True	NM_152991,NM_003797,NM_007166	chr11,chr11,chr11	+,+,-	EED,EED,PICALM	-615,-615,-176271
chr10:35633675-35634911	chr10	+	35634406	35634960	True	NM_001198777,NM_145012	chr10,chr10	-,+	CUL2,CCNY	-254836,-8663
chr4:81951167-81951996	chr4	+	81951310	81951862	True	NM_006259,NM_001201	chr4,chr4	-,+	PRKG2,BMP3	174403,256
chr1:152008403-152008814	chr1	+	152008443	152008737	True	NR_024237,NM_005620	chr1,chr1	+,-	LOC100132111,S100A11	-197549,834
chr8:125384698-125385202	chr8	+	125384744	125385172	True	NM_017956,NM_194291	chr8,chr8	+,-	TRMT12,TMEM65	77875,-162
chr5:176827467-176827700	chr5	+	176827475	176827723	True	NM_001029886,NM_000505,NM_003052	chr5,chr5,chr5	-,-,+	PFN3,F12,SLC34A1	-36,8904,-16094
chrX:107977214-107978077	chrX	+	107977224	107978054	True	NM_033380,NM_003604	chrX,chrX	+,-	COL4A5,IRS4	-294134,1603
chr7:53728177-53729681	chr7	+	53728295	53729718	True	NM_182595,NR_004422	chr7,chr7	+,-	POM121L12,HPVC1	-624997,540446
chr1:53309651-53310432	chr1	+	53309692	53310139	True	NM_001198961,NM_001004339	chr1,chr1	-,+	ECHDC2,ZYG11A	77363,-1560
chr3:142372361-142374282	chr3	+	142372501	142374285	True	NM_001184,NM_001172312	chr3,chr3	-,+	ATR,PLS1	-74833,1453
chr15:81070482-81071342	chr15	+	81070486	81071202	True	NM_018689,NR_030393	chr15,chr15	+,-	KIAA1199,MIR549	509,63262
chr19:19375369-19376751	chr19	+	19375434	19376745	True	NM_023002,NM_001001524,NM_004386	chr19,chr19,chr19	-,-,+	HAPLN4,TM6SF2,NCAN	-1838,7379,-52703
chr3:184450632-184452053	chr3	+	184450653	184451939	True	NM_001009921,NM_022149	chr3,chr3	+,-	VPS8,MAGEF1	77991,-20817
chr10:43957062-43957877	chr10	+	43957350	43957769	True	NR_026693,NM_001098204	chr10,chr10	+,-	ZNF487P,HNRNPF	-24827,-52654
chr12:122668800-122669141	chr12	+	122668932	122669110	True	NM_001014336,NM_001098519	chr12,chr12	-,+	IL31,LRRC43	-10186,-1323
chr19:17355104-17355389	chr19	+	17355226	17355398	True	NM_005234,NM_024578	chr19,chr19	-,+	NR2F6,OCEL1	803,-18222
chr17:47285382-47286652	chr17	+	47285859	47286541	True	NM_016428,NM_001135186,NM_001198755,NM_001198754,NM_001198756,NM_031498	chr17,chr17,chr17,chr17,chr17,chr17	+,+,-,-,-,-	ABI3,ABI3,GNGT2,GNGT2,GNGT2,GNGT2	1047,1047,271,1445,271,252
chr1:109656178-109656438	chr1	+	109656180	109656424	True	NM_001122961,NM_020775	chr1,chr1	-,+	C1orf194,KIAA1324	105,160
chr7:134919017-134920667	chr7	+	134919206	134920005	True	NM_014149,NM_182489	chr7,chr7	-,+	WDR91,STRA8	-22890,-2527
chr6:116600164-116600703	chr6	+	116600166	116600656	True	NM_003309,NM_001080976	chr6,chr6	-,+	TSPYL1,DSE	674,626
chr1:23694456-23694665	chr1	+	23694478	23694604	True	NR_033691,NR_033690,NM_001077195,NM_030634	chr1,chr1,chr1,chr1	+,+,-,-	C1orf213,C1orf213,ZNF436,ZNF436	1106,859,1803,325
chr2:32237750-32238798	chr2	+	32237837	32238802	True	NM_015955,NM_014946,NM_001137602	chr2,chr2,chr2	-,+,-	MEMO1,SPAST,MEMO1	-2139,49877,-2139
chr4:86852113-86853783	chr4	+	86852291	86853653	True	NM_031305,NM_138981	chr4,chr4	+,-	ARHGAP24,MAPK10	-925,175203
chr10:102756535-102756849	chr10	+	102756571	102756639	True	NM_001163812,NM_001163813,NM_001163814,NM_032112,NM_021830,NM_176794,NM_176793,NM_176792,NM_032429	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,-,+,-,-,-,+	C10orf2,C10orf2,C10orf2,MRPL43,C10orf2,MRPL43,MRPL43,MRPL43,LZTS2	-9330,-9330,-9330,-9299,-9330,-9299,-9299,-9299,224
chr16:2562605-2563153	chr16	+	2562662	2563066	True	NM_001145815,NM_001048212,NM_015944,NM_001694,NM_001198569	chr16,chr16,chr16,chr16,chr16	+,-,+,+,+	AMDHD2,CEMP1,AMDHD2,ATP6V0C,ATP6V0C	7296,18393,7296,804,660
chr15:83476724-83477181	chr15	+	83476887	83477167	True	NM_001007122,NM_001080435	chr15,chr15	-,+	FSD2,WHAMM	-2081,805
chr6:26537159-26537546	chr6	+	26537197	26537573	True	NM_006353,NM_024639	chr6,chr6	+,-	HMGN4,ZNF322A	998,122440
chr7:153587554-153588197	chr7	+	153587553	153587713	True	NM_007349,NM_001039350	chr7,chr7	-,+	PAXIP1,DPP6	1207019,-3185
chr1:1335648-1336675	chr1	+	1335863	1336655	True	NM_001039577,NM_017971,NR_015434,NM_030937	chr1,chr1,chr1,chr1	-,-,+,-	CCNL2,MRPL20,LOC148413,CCNL2	-1145,6088,-1004,-1145
chr16:11437370-11438557	chr16	+	11437664	11438589	True	NM_152308,NM_002761	chr16,chr16	+,-	C16orf75,PRM1	721,-62472
chrX:57101452-57102335	chrX	+	57101497	57102158	True	NM_001006681,NM_174912	chrX,chrX	-,+	SPIN2B,FAAH2	45880,210951
chr6:160898291-160899241	chr6	+	160898307	160899284	True	NR_028093,NM_021977	chr6,chr6	-,+	LPAL2,SLC22A3	32925,-128946
chr4:39635790-39637715	chr4	+	39635892	39637429	True	NM_174921,NM_001111112	chr4,chr4	-,+	C4orf34,UBE2K	3103,62234
chr9:84540369-84541293	chr9	+	84540431	84541329	True	NM_001145197,NM_005077	chr9,chr9	+,-	FAM75D4,TLE1	2013,-236835
chr9:84540369-84541293	chr9	+	84555503	84556401	False	NM_005077,NM_207416	chr9,chr9	-,+	TLE1,FAM75D3	-251907,2013
chr7:128430416-128430624	chr7	+	128430439	128430669	True	NM_001201372,NM_001708,NM_022742	chr7,chr7,chr7	+,-,+	CCDC136,OPN1SW,CCDC136	794,-14595,1380
chr10:134900063-134900387	chr10	+	134900095	134900287	True	NM_173572,NM_001083909	chr10,chr10	-,+	C10orf93,GPR123	-144006,1121
chr9:140322077-140322470	chr9	+	140322160	140322394	True	NM_006647,NM_017820	chr9,chr9	+,-	NOXA1,EXD3	-4364,-4446
chr11:65326206-65326578	chr11	+	65326328	65326558	True	NM_001130144,NM_021070,NM_001164266,NM_006396	chr11,chr11,chr11,chr11	-,-,-,+	LTBP3,LTBP3,LTBP3,SSSCA1	-629,-629,-629,11384
chr20:50421129-50422391	chr20	+	50421162	50422444	True	NM_020436,NM_014484	chr20,chr20	-,+	SALL4,MOCS3	-2114,-845864
chr11:131148958-131150430	chr11	+	131148970	131150360	True	NM_001048209,NM_014758	chr11,chr11	+,-	NTM,SNX19	90010,-362588
chr2:95942631-95943171	chr2	+	95942712	95943170	True	NM_001165978,NM_144707,NM_032788,NM_001165977	chr2,chr2,chr2,chr2	+,+,-,+	PROM2,PROM2,ZNF514,PROM2	-2562,-2562,-117449,-2562
chr14:34928958-34930910	chr14	+	34929164	34930939	True	NR_002937,NM_138288	chr14,chr14	+,-	C14orf19,C14orf147	478188,579
chr9:115875613-115876149	chr9	+	115875658	115876050	True	NR_024376,NR_024366	chr9,chr9	-,+	NCRNA00256B,NCRNA00256A	-1701,-533
chr9:115875613-115876149	chr9	-	115873082	115873474	False	NR_024376,NR_024366	chr9,chr9	-,+	NCRNA00256B,NCRNA00256A	533,1701
chr1:212795400-212796906	chr1	+	212795662	212796862	True	NM_153606,NM_018664	chr1,chr1	+,-	FAM71A,BATF3	926,76515
chr17:45264961-45265966	chr17	+	45264999	45265998	True	NM_001114091,NM_001002841,NM_001256	chr17,chr17,chr17	-,+,-	CDC27,MYL4,CDC27	717,20429,717
chrX:151886379-151887386	chrX	+	151886442	151887264	True	NM_001129826,NM_004909,NM_005361,NM_175742,NM_001129828,NM_175743,NM_153488,NM_001080848	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,+,+,-,+,+,-	CSAG3,CSAG2,MAGEA2,MAGEA2,CSAG3,MAGEA2,MAGEA2B,CSAG2	-8772,-8695,-3375,-3375,-8695,-3375,-1110,-8695
chrX:151886379-151887386	chrX	-	151918218	151919040	False	NM_001129826,NM_004909,NM_005361,NM_175742,NM_001129828,NM_175743,NM_153488,NM_001080848	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,-,-,+,-,-,+	CSAG3,CSAG2,MAGEA2,MAGEA2,CSAG3,MAGEA2,MAGEA2B,CSAG2	8770,8693,3375,3375,8693,3375,1110,8693
chr5:42971259-42971467	chr5	+	42971277	42971395	True	NR_015447,NR_034086	chr5,chr5	+,-	LOC153684,LOC648987	70840,47568
chr12:10526905-10527271	chr12	+	10526910	10527323	True	NM_007360,NM_007334	chr12,chr12	-,+	KLRK1,KLRD1	15384,-66552
chr8:67344188-67344698	chr8	+	67344272	67344554	True	NM_001080416,NM_015169,NM_144650	chr8,chr8,chr8	-,+,+	MYBL1,RRS1,ADHFE1	180976,-3065,163
chr3:196065368-196065856	chr3	+	196065404	196065696	True	NM_138461,NM_001204898,NM_152672,NM_001204897,NR_037950	chr3,chr3,chr3,chr3,chr3	-,-,+,-,-	TM4SF19,TM4SF19,OSTalpha,TM4SF19,TM4SF19-TCTEX1D2	-113,-113,-122072,-113,-113
chr7:40174675-40174876	chr7	+	40174695	40174815	True	NM_024728,NM_001193311,NM_001193312,NM_001193313,NM_138701	chr7,chr7,chr7,chr7,chr7	+,+,+,+,-	C7orf10,C7orf10,C7orf10,C7orf10,C7orf11	-171,-171,-171,-171,-444
chr4:8443498-8444333	chr4	+	8443726	8444328	True	NM_152544,NM_001101667,NM_003501	chr4,chr4,chr4	+,-,-	METTL19,ACOX3,ACOX3	-1245,-1274,-1274
chr1:115571375-115572861	chr1	+	115571507	115572903	True	NM_000549,NM_005725	chr1,chr1	+,-	TSHB,TSPAN2	-88,59275
chr15:69744492-69744814	chr15	+	69744508	69744858	True	NR_030714,NM_213725,NM_001003	chr15,chr15,chr15	-,+,+	MIR629,RPLP1,RPLP1	626999,300,300
chr7:148134992-148136598	chr7	+	148135266	148136266	True	NM_145304,NM_001203249	chr7,chr7	+,-	C7orf33,EZH2	151390,444391
chr12:6494218-6494454	chr12	+	6494225	6494467	True	NM_002342,NM_001159576,NM_001159575,NM_001038	chr12,chr12,chr12,chr12	+,-,-,-	LTBR,SCNN1A,SCNN1A,SCNN1A	-919,-9835,-7702,-9320
chr9:130886941-130888275	chr9	+	130887160	130888100	True	NR_027812,NR_033374,NR_024425,NR_027811,NM_025072	chr9,chr9,chr9,chr9,chr9	-,-,+,-,-	PTGES2,LOC100289019,LOC389791,PTGES2,PTGES2	2662,-6147,2707,2662,2424
chr15:64647463-64647865	chr15	+	64647462	64647706	True	NM_022048,NM_016213	chr15,chr15	-,+	CSNK1G1,TRIP4	786,32296
chr9:14313796-14314064	chr9	+	14314044	14314112	True	NM_005596,NR_003920,NM_001190737	chr9,chr9,chr9	-,+,-	NFIB,LOC389705,NFIB	1,679212,1
chr6:33755445-33756062	chr6	+	33755445	33755923	True	NM_001143944,NM_002224,NM_181336	chr6,chr6,chr6	-,+,-	LEMD2,ITPR3,LEMD2	-726,-166340,1033
chr20:37596366-37596872	chr20	+	37596369	37596865	True	NM_001190809,NR_033905,NR_027124,NM_021931	chr20,chr20,chr20,chr20	+,+,-,+	DHX35,DHX35,LOC339568,DHX35	-5439,-5439,256576,-5439
chr10:95242012-95242726	chr10	+	95242093	95242765	True	NM_001127182,NM_013451,NM_133337	chr10,chr10,chr10	+,-,-	CEP55,MYOF,MYOF	13603,-19,-19
chr5:171881213-171881469	chr5	+	171881269	171881341	True	NM_001017995,NM_001142651	chr5,chr5	-,+	SH3PXD2B,NEURL1B	236,186934
chr1:48280379-48281342	chr1	+	48280462	48281358	True	NM_001194986,NM_004474	chr1,chr1	-,+	LOC388630,FOXD2	181254,-378824
chr3:145932203-145933733	chr3	+	145932252	145933714	True	NR_033439,NM_003412	chr3,chr3	-,+	PLSCR4,ZIC1	34988,1193466
chr5:179105662-179106226	chr5	+	179105715	179106237	True	NM_001024649,NM_001164444	chr5,chr5	+,-	CANX,CBY3	19692,1788
chr4:25378030-25378436	chr4	+	25378041	25378474	True	NM_013367,NM_016955	chr4,chr4	+,-	ANAPC4,SEPSECS	373,-215837
chr9:33261105-33262349	chr9	+	33261106	33262373	True	NM_001172415,NM_001195536,NM_004323,NM_016410	chr9,chr9,chr9,chr9	-,+,-,+	BAG1,CHMP5,BAG1,CHMP5	2437,2503,2437,2503
chr17:45910973-45911614	chr17	+	45911288	45911654	True	NM_138355,NR_037575,NM_148887,NM_001145023,NM_033413,NM_145255	chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,+,-	SCRN2,MRPL10,MRPL10,SCRN2,LRRC46,MRPL10	7095,-2381,-2381,7095,-2347,-2381
chr1:152724886-152725755	chr1	+	152724941	152725806	True	NM_001025231,NM_178351	chr1,chr1	+,-	KPRP,LCE1C	4699,53357
chr10:94968564-94970068	chr10	+	94968617	94969642	True	NM_013451,NM_000783	chr10,chr10	-,+	MYOF,CYP26A1	272482,-135021
chr1:114417863-114418855	chr1	+	114417887	114418723	True	NM_012411,NR_037864,NM_001193431,NM_015967	chr1,chr1,chr1,chr1	-,+,-,-	PTPN22,LOC100287722,PTPN22,PTPN22	-3512,-18692,-3512,-3512
chr2:20208774-20209626	chr2	+	20209457	20209606	True	NR_033875,NM_002381	chr2,chr2	+,-	FLJ12334,MATN3	-140898,2904
chr12:58165300-58165614	chr12	+	58165335	58165625	True	NM_206914,NM_023033,NM_005371,NM_015433,NM_000785	chr12,chr12,chr12,chr12,chr12	+,-,-,+,-	METTL21B,METTL1,METTL1,METTL21B,CYP27B1	757,339,339,757,-4359
chr2:166914463-166915159	chr2	+	166914463	166915196	True	NM_024969,NM_001165963	chr2,chr2	+,-	CSRNP3,SCN1A	-485670,15004
chr15:50975785-50976289	chr15	+	50975976	50976074	True	NM_017672,NM_007347	chr15,chr15	-,+	TRPM7,AP4E1	3000,224871
chr19:58874691-58874955	chr19	+	58874850	58874950	True	NM_130786,NM_198458,NR_015380	chr19,chr19,chr19	-,-,+	A1BG,ZNF497,A1BG-AS1	-9985,-730,-11565
chr1:244218083-244218535	chr1	+	244218258	244218540	True	NM_005465,NM_205768,NM_006352	chr1,chr1,chr1	-,+,+	AKT3,ZNF238,ZNF238	-211705,-3748,-1727
chr14:103010460-103010692	chr14	+	103010575	103010733	True	NM_152326,NR_036192	chr14,chr14	-,+	ANKRD9,MIR4309	-34447,-4645
chr12:121789788-121790212	chr12	+	121789803	121790245	True	NM_001137559,NM_016237,NM_025126	chr12,chr12,chr12	-,-,+	ANAPC5,ANAPC5,RNF34	1817,70,47656
chr10:129685900-129686269	chr10	+	129685905	129686279	True	NM_006504,NM_152311	chr10,chr10	+,-	PTPRE,CLRN3	19045,4982
chr11:77850199-77850674	chr11	+	77850204	77850706	True	NM_024079,NM_001007027,NM_020798	chr11,chr11,chr11	-,-,+	ALG8,ALG8,USP35	43,43,49151
chr2:219155312-219156540	chr2	+	219155436	219156520	True	NM_015488,NM_022152	chr2,chr2	+,-	PNKD,TMBIM1	-20372,810
chr2:48792350-48793473	chr2	+	48792652	48793303	True	NM_000233,NM_172311	chr2,chr2	-,+	LHCGR,STON1-GTF2A1L	189634,2855
chr7:72474166-72474444	chr7	+	72474172	72474456	True	NM_001013739,NR_003614	chr7,chr7	-,+	STAG3L3,PMS2L2	2051,2223
chr7:72474166-72474444	chr7	+	74304437	74304508	False	NR_027777,NR_027776,NM_001025202,NR_027775	chr7,chr7,chr7,chr7	+,+,-,+	PMS2P5,PMS2P5,STAG3L2,PMS2P5	2385,2385,2274,2385
chr7:72474166-72474444	chr7	-	74990440	74990724	False	NR_003614,NM_001002840,NM_018991	chr7,chr7,chr7	-,+,+	PMS2L2,STAG3L1,STAG3L1	-2225,-2046,-2046
chr1:54483523-54483894	chr1	+	54483539	54483865	True	NM_001010978,NM_153035	chr1,chr1	-,+	LDLRAD1,TCEANC2	-12,35408
chr9:35657061-35657502	chr9	+	35657155	35657471	True	NM_032818,NM_014450,NM_001195201,NM_001195200,NR_003051,NM_001195217,NM_174923	chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,-,+,+,-,+,+	C9orf100,SIT1,CCDC107,CCDC107,RMRP,CCDC107,CCDC107	7857,-6208,815,815,594,815,815
chr7:64987577-64988825	chr7	+	64987883	64988768	True	NM_000181,NR_027392	chr7,chr7	-,+	GUSB,INTS4L2	458583,124008
chr7:64987577-64988825	chr7	-	65143722	65144607	False	NM_000181,NR_027392	chr7,chr7	-,+	GUSB,INTS4L2	302751,-30996
chr7:64987577-64988825	chr7	-	64632515	64633398	False	NR_027393,NM_001007253	chr7,chr7	+,-	INTS4L1,ERV3	-30963,-165391
chr9:132935983-132936480	chr9	+	132936121	132936469	True	NM_014286,NM_015033	chr9,chr9	+,-	NCS1,FNBP1	-1315,-130648
chr14:94595101-94595546	chr14	+	94595105	94595417	True	NM_032036,NM_005532	chr14,chr14	-,+	IFI27L2,IFI27	592,-18077
chr18:42261336-42262313	chr18	+	42261392	42262135	True	NM_015559,NM_001130110,NR_036203	chr18,chr18,chr18	+,+,-	SETBP1,SETBP1,MIR4319	-582,-1307,288047
chr9:80849962-80850598	chr9	+	80849961	80850407	True	NM_001098802,NM_002072,NM_032171	chr9,chr9,chr9	+,-,+	CEP78,GNAQ,CEP78	583,-203742,583
chr13:64315298-64315669	chr13	+	64315339	64315545	True	NM_022843,NR_002171	chr13,chr13	-,+	PCDH20,OR7E156P	-2325684,-3822
chr11:33891586-33891973	chr11	+	33891649	33891923	True	NM_001142316,NM_203364,NM_001142315	chr11,chr11,chr11	-,+,-	LMO2,CAPRIN1,LMO2	-278,181306,-140
chr8:95898105-95898649	chr8	+	95898229	95898651	True	NM_057749,NM_017864	chr8,chr8	-,+	CCNE2,INTS8	8881,-62753
chr17:27919813-27920027	chr17	+	27919816	27920062	True	NM_014030,NM_001085454,NM_152345	chr17,chr17,chr17	-,-,+	GIT1,GIT1,ANKRD13B	-3206,-3206,464
chr6:158406553-158406822	chr6	+	158406562	158406741	True	NM_003898,NM_032861	chr6,chr6	+,-	SYNJ2,SERAC1	-3725,182622
chr19:14118189-14118564	chr19	+	14118188	14118400	True	NM_002918,NM_080864	chr19,chr19	-,+	RFX1,RLN3	-1054,20616
chr9:129672167-129672865	chr9	+	129672235	129672402	True	NM_001190729,NM_001190730,NM_012098,NM_014636	chr9,chr9,chr9,chr9	+,+,-,+	RALGPS1,RALGPS1,ANGPTL2,RALGPS1	4650,4650,212705,4650
chr21:40760739-40761322	chr21	+	40760885	40760969	True	NM_004627,NM_004965,NM_001146218	chr21,chr21,chr21	+,-,+	WRB,HMGN1,WRB	-8730,-39838,-1251
chr14:36295690-36296016	chr14	+	36295691	36295883	True	NM_194301,NM_032352	chr14,chr14	-,+	RALGAPA1,BRMS1L	-17259,-145
chr21:45597847-45598069	chr21	+	45597869	45598065	True	NM_198155,NM_015259	chr21,chr21	+,-	C21orf33,ICOSLG	-44426,62819
chr19:47921321-47921693	chr19	+	47921326	47921702	True	NM_001009813,NM_014681,NM_020160	chr19,chr19,chr19	-,+,-	MEIS3,DHX34,MEIS3	1133,-68839,1133
chrX:57020067-57021648	chrX	+	57020238	57021484	True	NR_027139,NM_001010862,NR_015367	chrX,chrX,chrX	-,-,+	SPIN3,SPIN3,LOC550643	554,554,-264571
chr13:76333886-76334848	chr13	+	76334107	76334880	True	NM_203497,NM_015842	chr13,chr13	-,+	COMMD6,LMO7	-222116,-10
chr1:207195517-207195865	chr1	+	207195529	207195837	True	NM_001083924,NM_006212	chr1,chr1	-,+	C1orf116,PFKFB2	10314,30782
chr6:150327831-150328897	chr6	+	150327867	150328363	True	NR_024045,NM_025218	chr6,chr6	-,+	RAET1K,ULBP1	-1587,-42775
chr14:55739523-55740486	chr14	+	55739693	55740455	True	NM_152231,NM_014750,NM_017943	chr14,chr14,chr14	+,-,+	FBXO34,DLGAP5,FBXO34	-872,-81297,-1723
chr6:94430326-94431649	chr6	+	94430514	94431686	True	NM_004440,NR_015362	chr6,chr6	-,+	EPHA7,TSG1	-301214,-13764
chr12:6452601-6453976	chr12	+	6452667	6453277	True	NM_001144857,NM_001065	chr12,chr12	+,-	PLEKHG6,TNFRSF1A	-30901,-1384
chr16:81041634-81041842	chr16	+	81041750	81041868	True	NM_020188,NM_001100624,NM_018455,NM_001100625	chr16,chr16,chr16,chr16	-,+,+,+	C16orf61,CENPN,CENPN,CENPN	-1248,-1698,-1698,-1698
chr14:94599897-94601187	chr14	+	94599906	94601223	True	NM_032036,NM_005532	chr14,chr14	-,+	IFI27L2,IFI27	-3949,-22878
chr19:18119866-18120515	chr19	+	18119876	18120492	True	NM_015683,NM_001025604,NM_005535	chr19,chr19,chr19	+,+,-	ARRDC2,ARRDC2,IL12RB1	-950,-7983,77255
chr22:38793426-38793798	chr22	+	38793445	38793648	True	NM_016657,NR_002821	chr22,chr22	+,-	KDELR3,LOC400927	70434,1333
chr4:88928156-88928565	chr4	+	88928167	88928503	True	NM_000297,NM_004827	chr4,chr4	+,-	PKD2,ABCG2	295,151558
chr19:9696458-9697857	chr19	+	9696641	9697789	True	NM_001008727,NM_001172651	chr19,chr19	-,+	ZNF121,ZNF177	-1432,-209700
chr21:45718832-45719402	chr21	+	45719186	45719402	True	NR_024108,NM_000658,NM_002626,NM_175867	chr21,chr21,chr21,chr21	+,+,+,-	PFKL,AIRE,PFKL,DNMT3L	522,-8963,527,-37087
chr11:65777921-65778404	chr11	+	65778127	65778435	True	NM_003860,NM_001143985,NM_001323,NM_032325	chr11,chr11,chr11,chr11	+,+,+,-	BANF1,BANF1,CST6,EIF1AD	-8628,-8628,1026,-8549
chr17:1303787-1304006	chr17	+	1303797	1303903	True	NM_006761,NR_024058,NR_028514	chr17,chr17,chr17	-,-,+	YWHAE,YWHAE,LOC100306951	-241,-241,116309
chr16:2037857-2038680	chr16	+	2038070	2038694	True	NM_144603,NM_172168,NM_004209,NM_172167,NM_005262	chr16,chr16,chr16,chr16,chr16	-,-,+,-,+	NOXO1,NOXO1,SYNGR3,NOXO1,GFER	-6630,-6886,1251,-6886,-3971
chr2:201409888-201410344	chr2	+	201410063	201410343	True	NM_152387,NM_152524	chr2,chr2	-,+	KCTD18,SGOL2	-35271,-19259
chr3:187088578-187089571	chr3	+	187088717	187089611	True	NM_022147,NM_001031849	chr3,chr3	+,-	RTP4,MASP1	-2600,-78907
chr9:93506500-93507220	chr9	+	93506708	93507240	True	NM_001135052,NM_017594	chr9,chr9	+,-	SYK,DIRAS2	56771,-101600
chr1:230204127-230204375	chr1	+	230204149	230204293	True	NM_004481,NM_024554	chr1,chr1	+,-	GALNT2,PGBD5	-1244,309148
chr15:69459477-69460491	chr15	+	69459681	69460237	True	NM_006305,NM_015554	chr15,chr15	-,+	ANP32A,GLCE	-346420,-6766
chr7:55640718-55642625	chr7	+	55640864	55642470	True	NM_018697,NM_030796	chr7,chr7	+,-	LANCL2,VOPP1	-207782,-664
chr11:24615499-24616396	chr11	+	24615498	24616080	True	NM_001009909,NM_001195637	chr11,chr11	+,-	LUZP2,LOC100500938	-96997,-1733526
chr11:61975479-61975708	chr11	+	61975625	61975762	True	NM_206998,NM_002407	chr11,chr11	-,+	SCGB1D4,SCGB2A1	90831,377
chr8:144691546-144691859	chr8	+	144691712	144691906	True	NM_023078,NM_032862,NM_003313	chr8,chr8,chr8	-,+,-	PYCRL,TIGD5,TSTA3	-42,-11689,7876
chr14:36296304-36296619	chr14	+	36296341	36296664	True	NM_194301,NM_032352	chr14,chr14	-,+	RALGAPA1,BRMS1L	-17909,-795
chr16:75149182-75150539	chr16	+	75149216	75150413	True	NM_153486,NM_194436,NM_153688	chr16,chr16,chr16	-,-,+	LDHD,LDHD,ZFP1	307,307,32007
chrX:44704035-44704317	chrX	+	44704075	44704363	True	NM_022076,NM_173794	chrX,chrX	+,-	DUSP21,FUNDC1	-880,-301854
chr4:146000900-146001913	chr4	+	146001308	146001736	True	NM_001040876,NM_014885	chr4,chr4	+,-	ABCE1,ANAPC10	17419,17692
chr11:320112-320312	chr11	+	320248	320316	True	NM_021034,NM_003641	chr11,chr11	-,+	IFITM3,IFITM1	648,-6308
chr11:320112-320312	chr11	-	308686	308754	False	NM_006435,NM_003641,NM_001025295	chr11,chr11,chr11	+,+,-	IFITM2,IFITM1,IFITM5	-630,5236,-9160
chr6:43199276-43200586	chr6	+	43199328	43200515	True	NM_006443,NM_199184,NM_032538	chr6,chr6,chr6	-,-,+	C6orf108,C6orf108,TTBK1	-2117,-2117,10706
chr2:190305606-190305851	chr2	+	190305641	190305887	True	NM_032168,NM_014585	chr2,chr2	+,-	WDR75,SLC40A1	271,139700
chr17:48473755-48474401	chr17	+	48473822	48474415	True	NM_152463,NM_018509	chr17,chr17	+,-	EME1,LRRC59	-23293,549
chrX:144900178-144901499	chrX	+	144900224	144901484	True	NM_004709,NM_032539,NM_001144010,NM_001144003,NM_001144004,NM_001144005,NM_001144006,NR_030589,NM_001144008,NM_001144009	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,+,+,-,+,+	CXorf1,SLITRK2,SLITRK2,SLITRK2,SLITRK2,SLITRK2,SLITRK2,MIR890,SLITRK2,SLITRK2	7443,-928,1381,-928,-928,-928,1381,174436,1381,1381
chr3:56720213-56721307	chr3	+	56720646	56721035	True	NR_024460,NM_001112736	chr3,chr3	+,-	CCDC66,C3orf63	-129520,-3511
chr5:98106235-98106562	chr5	+	98106240	98106591	True	NM_001012761,NR_033932	chr5,chr5	+,-	RGMB,FLJ35946	-1292,2247
chr2:107111917-107112510	chr2	+	107112020	107112256	True	NM_001144013,NR_003506	chr2,chr2	-,+	RGPD3,PLGLA	-27219,-109302
chr2:107111917-107112510	chr2	-	87080580	87080816	False	NR_037931,NM_172101,NM_172102,NM_001178100,NM_172213,NM_004931	chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-	LOC100286979,CD8B,CD8B,CD8B,CD8B,CD8B	8131,8281,8281,8281,8281,8281
chr10:119303483-119303705	chr10	+	119303571	119303691	True	NM_004098,NR_002791,NM_001165924	chr10,chr10,chr10	+,-,+	EMX2,EMX2OS,EMX2	-1666,938,-1666
chrX:19907473-19908739	chrX	+	19907977	19908490	True	NM_031892,NM_001173456	chrX,chrX	-,+	SH3KBP1,PDHA1	-2233,-546024
chr11:78042143-78042939	chr11	+	78042241	78042963	True	NM_020798,NM_012296	chr11,chr11	+,-	USP35,GAB2	-142441,10013
chr21:43922834-43924057	chr21	+	43922859	43924095	True	NM_080860,NM_018964	chr21,chr21	-,+	RSPH1,SLC37A1	-6458,-3168
chr4:190904952-190905475	chr4	+	190904987	190905297	True	NM_020040,NM_004477	chr4,chr4	-,+	TUBB4Q,FRG1	777,-43064
chr6:66252620-66253033	chr6	+	66252619	66252854	True	NR_026540,NM_198283	chr6,chr6	+,-	MCART3P,EYS	244917,36904
chr16:18995821-18996303	chr16	+	18995821	18996311	True	NM_015092,NM_024847,NM_001160364	chr16,chr16,chr16	-,+,+	SMG1,TMC7,TMC7	-58095,-617,-264
chr17:42288029-42288641	chr17	+	42288150	42288690	True	NM_001076683,NM_177441,NM_001076684,NM_014233	chr17,chr17,chr17,chr17	-,+,-,-	UBTF,TMUB2,UBTF,UBTF	9610,-23627,8284,7024
chr6:74081327-74082595	chr6	+	74081939	74082611	True	NM_001080507,NM_001017361	chr6,chr6	-,+	OOEP,C6orf221	-2424,-9591
chr18:61626366-61628161	chr18	+	61627025	61628138	True	NM_198833,NR_027245,NM_002640,NM_001031848	chr18,chr18,chr18,chr18	+,-,+,+	SERPINB8,C18orf20,SERPINB8,SERPINB8	9124,188172,9124,9124
chr9:126031851-126033108	chr9	+	126031868	126032812	True	NM_173689,NM_001171137,NM_018387,NR_033234	chr9,chr9,chr9,chr9	+,-,-,-	CRB2,STRBP,STRBP,STRBP	85635,-1013,-1025,-1025
chr13:50202991-50203760	chr13	+	50203446	50203776	True	NM_138450,NM_018191	chr13,chr13	+,-	ARL11,RCBTB1	-1063,-43727
chr17:41477518-41479215	chr17	+	41477936	41479182	True	NM_001661,NR_027413	chr17,chr17	+,-	ARL4D,LOC100130581	-1639,-11670
chr17:38721701-38723312	chr17	+	38721872	38723362	True	NM_001552,NM_001838	chr17,chr17	+,-	IGFBP4,CCR7	-122247,-136
chr8:17027878-17029802	chr8	+	17028043	17029836	True	NM_013354,NM_016353	chr8,chr8	-,+	CNOT7,ZDHHC2	74601,-14258
chr10:21179679-21181399	chr10	+	21179717	21181413	True	NM_006393,NM_001195627	chr10,chr10	-,+	NEBL,MLLT10	5168,641687
chr2:85786142-85787580	chr2	+	85786237	85787425	True	NM_003761,NM_001142269,NM_000821	chr2,chr2,chr2	+,-,-	VAMP8,GGCX,GGCX	17188,1283,1283
chr1:2985479-2985687	chr1	+	2985483	2985681	True	NM_022114,NR_024371,NR_015440,NM_199454	chr1,chr1,chr1,chr1	+,-,-,+	PRDM16,FLJ42875,FLJ42875,PRDM16	60,-1194,-1194,60
chr20:39767606-39768175	chr20	+	39767785	39768194	True	NM_002660,NM_182811,NM_015035	chr20,chr20,chr20	+,+,-	PLCG1,PLCG1,ZHX3	-1676,-1676,160598
chr11:6643225-6643448	chr11	+	6643324	6643484	True	NM_001014795,NM_000391,NM_006284	chr11,chr11,chr11	+,-,-	ILK,TPP1,TAF10	-18168,-2632,-9879
chr14:35449531-35450240	chr14	+	35449825	35450111	True	NM_182648,NM_003136,NM_001146282	chr14,chr14,chr14	-,+,+	BAZ1A,SRP54,SRP54	-104972,1992,1992
chr13:41241726-41242416	chr13	+	41241731	41242452	True	NM_002015,NM_014252	chr13,chr13	-,+	FOXO1,SLC25A15	-997,121094
chr19:33848248-33850093	chr19	+	33848503	33850129	True	NM_001806,NM_004364	chr19,chr19	+,-	CEBPG,CEBPA	14479,-55073
chr1:25664487-25664719	chr1	+	25664537	25664685	True	NM_020485,NM_014313	chr1,chr1	-,+	RHCE,TMEM50A	82728,103
chr1:25664487-25664719	chr1	+	25594266	25594356	False	NM_001127691,NM_020317,NM_016124	chr1,chr1,chr1	+,-,+	RHD,C1orf63,RHD	4624,-20281,4624
chr11:20594540-20595713	chr11	+	20594761	20595711	True	NM_001029865,NM_004211	chr11,chr11	-,+	DBX1,SLC6A5	-412891,25234
chr22:38797022-38798026	chr22	+	38797031	38797909	True	NM_016657,NR_002821	chr22,chr22	+,-	KDELR3,LOC400927	66173,-2100
chr1:16346912-16348420	chr1	+	16347114	16348421	True	NM_014424,NM_004070,NM_001042704	chr1,chr1,chr1	-,+,+	HSPB7,CLCNKA,CLCNKA	-1829,64,64
chr15:40673031-40674898	chr15	+	40673031	40674917	True	NM_001142762,NM_001142761,NM_207380,NM_033286	chr15,chr15,chr15,chr15	+,+,-,+	C15orf23,C15orf23,C15orf52,C15orf23	4,4,-39863,4
chr19:57627972-57628617	chr19	+	57628238	57628666	True	NM_020903,NM_052882	chr19,chr19	+,-	USP29,ZIM3	2842,27954
chrX:24710778-24711655	chrX	+	24710779	24711617	True	NM_016937,NM_001163264	chrX,chrX	+,-	POLA1,PCYT1B	446,-19800
chr16:29274121-29275694	chr16	+	29274231	29275431	True	NR_002939,NM_001031827	chr16,chr16	+,-	RUNDC2C,BOLA2	27109,190904
chr16:29274121-29275694	chr16	+	88270646	88270696	False	NM_001127464,NM_001739	chr16,chr16	+,-	ZNF469,CA5A	223182,-300534
chr10:104955306-104955850	chr10	+	104955737	104955813	True	NM_012229,NM_001134373,NM_001143909	chr10,chr10,chr10	-,-,+	NT5C2,NT5C2,LOC729020	-2681,-2681,49830
chr6:76463476-76464685	chr6	+	76463648	76464434	True	NM_015687,NM_004999	chr6,chr6	-,+	FILIP1,MYO6	-260152,-4798
chr12:50498021-50498822	chr12	+	50498069	50498871	True	NM_032901,NM_147190,NM_005276	chr12,chr12,chr12	+,-,+	C12orf62,LASS5,GPD1	7028,62276,-319
chr22:39917161-39917789	chr22	+	39917231	39917807	True	NM_194326,NM_182810,NM_001675	chr22,chr22,chr22	-,+,+	RPS19BP1,ATF4,ATF4	11103,-713,-713
chr2:198381366-198382787	chr2	+	198381459	198382495	True	NM_199482,NM_015387,NM_001100819,NM_199440,NM_001204094	chr2,chr2,chr2,chr2,chr2	+,+,+,-,+	MOBKL3,MOBKL3,MOBKL3,HSPD1,MOBKL3	-1229,-757,-757,-16461,-502
chr19:1247601-1248014	chr19	+	1247786	1247858	True	NM_001001975,NM_152769,NM_001687,NM_177401	chr19,chr19,chr19,chr19	+,-,+,+	ATP5D,C19orf26,ATP5D,MIDN	-6088,-9796,-6088,693
chr8:82644829-82646001	chr8	+	82645165	82646027	True	NR_033196,NM_152284	chr8,chr8	-,+	ZFAND1,CHMP4C	-11626,-528
chr3:46739251-46739693	chr3	+	46739253	46739499	True	NM_001190707,NM_147196,NR_033815,NM_147129	chr3,chr3,chr3,chr3	-,+,-,-	ALS2CL,TMIE,ALS2CL,ALS2CL	-4107,3323,-4059,-4059
chrX:119706174-119708011	chrX	+	119706354	119708066	True	NM_014060,NM_003588	chrX,chrX	+,-	MCTS1,CUL4B	29677,1674
chr2:54682555-54683013	chr2	+	54682792	54683022	True	NM_003128,NM_001003937	chr2,chr2	+,-	SPTBN1,TSPYL6	431,-199383
chr3:51985082-51986476	chr3	+	51985303	51986274	True	NM_005485,NM_001003931,NM_080865,NM_004704	chr3,chr3,chr3,chr3	+,+,+,-	PARP3,PARP3,GPR62,RRP9	-8996,-8996,3055,-9381
chr8:102131554-102133327	chr8	+	102132028	102133359	True	NM_001042511,NR_033962	chr8,chr8	-,+	ZNF706,FLJ42969	84564,-67797
chr13:30951154-30952233	chr13	+	30951197	30952264	True	NM_005800,NR_024464	chr13,chr13	+,-	USPL1,LOC100188949	239565,-3161
chr1:64688560-64690125	chr1	+	64688668	64690111	True	NM_152489,NM_014288	chr1,chr1	+,-	UBE2U,ITGB3BP	-19229,-699833
chr22:35873011-35874193	chr22	+	35873047	35874178	True	NM_005368,NM_014310	chr22,chr22	-,+	MB,RASD2	139256,63173
chr5:52858981-52859422	chr5	+	52859193	52859269	True	NR_030307,NM_002495	chr5,chr5	-,+	MIR581,NDUFS4	388210,-2790
chr20:62587775-62588161	chr20	+	62588018	62588144	True	NM_017859,NM_001193379,NR_027287	chr20,chr20,chr20	-,-,+	UCKL1,UCKL1,UCKL1-AS1	-218,-5491,-3334
chr4:155471275-155471482	chr4	+	155471438	155471520	True	NM_002669,NM_001201564,NM_001184741	chr4,chr4,chr4	-,-,+	PLRG1,PLRG1,FGB	115,115,12611
chr5:154201571-154201940	chr5	+	154201675	154201979	True	NM_004779,NM_032385	chr5,chr5	+,-	CNOT8,C5orf4	36218,28284
chr14:95635961-95636597	chr14	+	95636285	95636500	True	NR_015415,NM_177438	chr14,chr14	+,-	FLJ45244,DICER1	-12311,-12526
chr11:129686791-129688733	chr11	+	129686948	129688378	True	NM_138788,NM_006165	chr11,chr11	+,-	TMEM45B,NFRKB	-1258,74576
chr4:119199861-119200102	chr4	+	119199865	119200097	True	NR_003584,NR_034011,NR_002963,NR_034010,NM_003619	chr4,chr4,chr4,chr4,chr4	+,+,+,+,-	SNHG8,SNHG8,SNORA24,SNHG8,PRSS12	1,1,247,1,73875
chr16:811847-812357	chr16	+	811850	812406	True	NM_001025190,NM_005823,NR_030384,NM_001177355,NM_013404,NM_022493	chr16,chr16,chr16,chr16,chr16,chr16	-,+,+,+,+,-	MSLNL,MSLN,MIR662,MSLN,MSLN,NARFL	20570,-1136,7776,-1135,-828,-20853
chr21:35446862-35448213	chr21	+	35446926	35448233	True	NM_032476,NM_006933,NM_001697	chr21,chr21,chr21	+,+,-	MRPS6,SLC5A3,ATP5O	-1155,-1108,-158768
chr6:76159869-76160103	chr6	+	76159982	76160124	True	NM_015687,NM_001100409	chr6,chr6	-,+	FILIP1,SENP6	43422,151497
chr11:85473246-85474850	chr11	+	85473571	85474660	True	NM_001162953,NM_001162951,NM_173556	chr11,chr11,chr11	-,-,+	SYTL2,SYTL2,CCDC83	-4527,-4527,91483
chr20:37435833-37436198	chr20	+	37435840	37436078	True	NM_001172735,NR_027241,NM_015568	chr20,chr20,chr20	+,-,+	PPP1R16B,LOC388796,PPP1R16B	-1543,-371822,-1543
chr9:21967487-21967888	chr9	+	21967487	21967897	True	NM_058197,NM_001195132,NM_000077,NR_024274	chr9,chr9,chr9,chr9	-,-,-,+	CDKN2A,CDKN2A,CDKN2A,C9orf53	6979,7285,7285,-400
chr20:44989481-44989690	chr20	+	44989588	44989691	True	NM_152854,NM_173073,NM_015945,NM_173179	chr20,chr20,chr20,chr20	+,-,-,-	CD40,SLC35C2,SLC35C2,SLC35C2	-242735,3424,3424,3424
chr9:112542191-112542444	chr9	+	112542321	112542465	True	NM_053016,NM_007203,NM_002829,NM_147150	chr9,chr9,chr9,chr9	+,+,-,+	PALM2,PALM2-AKAP2,PTPN3,PALM2-AKAP2	111,111,-281728,111
chr1:228785405-228786071	chr1	+	228785436	228786028	True	NR_002834,NM_033445,NR_037962	chr1,chr1,chr1	+,-,+	DUSP5P,HIST3H2A,RHOU	-4834,-139876,-5097
chr11:63932339-63932688	chr11	+	63932418	63932544	True	NM_006819,NM_014067	chr11,chr11	+,-	STIP1,MACROD1	21042,1091
chr17:7555996-7556816	chr17	+	7556130	7556766	True	NM_001678,NM_001126115	chr17,chr17	+,-	ATP1B2,TP53	-1927,22095
chr9:133716918-133718049	chr9	+	133717256	133717932	True	NM_005157,NM_198180	chr9,chr9	+,-	ABL1,QRFP	-6483,51351
chr11:62850753-62852185	chr11	+	62850752	62852208	True	NR_037193,NM_001136506	chr11,chr11	+,-	SLC3A2,SLC22A24	-201632,59535
chr11:101430537-101431438	chr11	+	101430797	101431440	True	NM_020802,NM_004621	chr11,chr11	+,-	KIAA1377,TRPC6	354305,23270
chr16:33205714-33205937	chr16	+	33205813	33205953	True	NM_001205260,NM_001205265,NM_001205259,NM_001099687,NM_016212,NR_033866	chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,-	LOC653550,TP53TG3B,LOC653550,TP53TG3B,TP53TG3,LOC390705	-279,-279,-279,-279,-884,92799
chr16:33205714-33205937	chr16	+	33262348	33262488	False	NM_001205260,NM_001205265,NM_001205259,NM_001099687,NM_016212,NR_033866	chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,-	LOC653550,TP53TG3B,LOC653550,TP53TG3B,TP53TG3,LOC390705	-279,-279,-279,-279,-884,36264
chr16:33205714-33205937	chr16	+	32264873	32264995	False	NR_033866,NM_003414	chr16,chr16	-,+	LOC390705,ZNF267	36361,-379845
chr16:33205714-33205937	chr16	-	32687079	32687219	False	NM_001205260,NM_016212,NM_001099687,NM_001205259,NM_001205265	chr16,chr16,chr16,chr16,chr16	-,-,-,-,-	LOC653550,TP53TG3,TP53TG3B,LOC653550,TP53TG3B	279,884,279,279,279
chr12:63327201-63327797	chr12	+	63327298	63327796	True	NR_029661,NM_020700	chr12,chr12	+,-	MIRLET7I,PPM1H	-329883,919
chr18:67609151-67610145	chr18	+	67609529	67610101	True	NM_006566,NM_004232	chr18,chr18	-,+	CD226,SOCS6	14181,346035
chr8:27470054-27470416	chr8	+	27470099	27470413	True	NM_001831,NM_016240,NM_203339,NM_001171138	chr8,chr8,chr8,chr8	-,+,-,-	CLU,SCARA3,CLU,CLU	1964,21163,-1161,-831
chrX:77151098-77151665	chrX	+	77151116	77151529	True	NM_001866,NM_032121	chrX,chrX	+,-	COX7B,MAGT1	3431,-51
chrX:120090476-120090783	chrX	+	120090533	120090621	True	NM_012084,NM_001080139,NM_001080138,NM_001080137,NM_173571,NM_001080146,NM_001080144,NM_001080145,NM_001080142,NM_001080143,NM_001080140,NM_001080141	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,-,-,-,-,-,-,-,-,-,-,-	GLUD2,CT47A8,CT47A9,CT47A10,CT47A11,CT47A1,CT47A3,CT47A2,CT47A5,CT47A4,CT47A7,CT47A6	90840,-4939,-4939,-4939,-4939,-4939,-4939,-4939,-4939,-4939,-79,4772
chrX:120090476-120090783	chrX	+	120009858	120009946	False	NM_012084,NM_001145718	chrX,chrX	+,-	GLUD2,CT47B1	171515,-79
chr1:147244776-147245757	chr1	+	147244998	147245623	True	NM_005266,NM_005267	chr1,chr1	-,+	GJA5,GJA8	28,129322
chr18:14488119-14488874	chr18	+	14488415	14488477	True	NR_024076,NR_026756	chr18,chr18	-,+	CXADRP3,LOC284233	10278,-151046
chr20:44193235-44194322	chr20	+	44193828	44194364	True	NM_080753,NM_181510	chr20,chr20	+,-	WFDC10A,WFDC8	64020,13651
chr17:10741327-10741741	chr17	+	10741366	10741790	True	NM_020233,NM_001101387	chr17,chr17	+,-	C17orf48,PIRT	-140490,-18
chr19:55420451-55421216	chr19	+	55420603	55420835	True	NM_004829,NR_027041,NR_027043,NM_001127255,NM_001145457,NM_001145458	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,-,+,+	NCR1,NCR1,NCR1,NLRP7,NCR1,NCR1	-3146,-3146,-3146,38088,-3146,-3146
chr1:229628147-229629732	chr1	+	229628243	229629569	True	NM_018230,NM_014777	chr1,chr1	-,+	NUP133,URB2	14570,132411
chr5:180241862-180242557	chr5	+	180242173	180242583	True	NM_001114618,NR_027183,NM_001114617	chr5,chr5,chr5	-,+,-	MGAT1,LOC729678,MGAT1	-5356,14375,-5036
chr1:12777241-12777796	chr1	+	12777275	12777715	True	NM_004753,NM_001103169,NM_001103170	chr1,chr1,chr1	-,+,+	DHRS3,AADACL3,AADACL3	-99455,-1208,-1208
chr2:91846944-91847505	chr2	+	91847088	91847172	True	NR_003503,NR_027238	chr2,chr2	+,-	GGT8P,LOC654342	116195,853
chr10:30992572-30994199	chr10	+	30992617	30993645	True	NM_183058,NM_005204	chr10,chr10	-,+	LYZL2,MAP3K8	-73970,-269802
chr11:117016387-117016928	chr11	+	117016437	117016733	True	NM_001184747,NM_001184746,NM_001184748,NM_025164,NM_002572	chr11,chr11,chr11,chr11,chr11	+,+,+,-,+	PAFAH1B2,PAFAH1B2,PAFAH1B2,SIK3,PAFAH1B2	-1493,-1493,-1493,-47444,-1493
chr10:43906528-43906918	chr10	+	43906684	43906806	True	NM_001098206,NR_026693,NM_001098204,NM_001098205,NM_004966	chr10,chr10,chr10,chr10,chr10	-,+,-,-,-	HNRNPF,ZNF487P,HNRNPF,HNRNPF,HNRNPF	-3385,25767,-1988,-2352,-2028
chr7:114569252-114569575	chr7	+	114569477	114569595	True	NM_002711,NM_001166346,NM_001166345,NM_199072	chr7,chr7,chr7,chr7	-,+,+,+	PPP1R3A,MDFIC,MDFIC,MDFIC	-1010395,-7319,-7319,-7319
chr7:114569252-114569575	chr7	+	114573629	114573679	False	NM_002711,NM_199072	chr7,chr7	-,+	PPP1R3A,MDFIC	-1014547,-11471
chr5:1203550-1203792	chr5	+	1203566	1203792	True	NM_001003841,NM_001193376,NM_006598	chr5,chr5,chr5	+,-,-	SLC6A19,TERT,SLC12A7	-1907,91420,-91394
chr3:9590272-9592051	chr3	+	9590388	9591836	True	NM_198560,NM_001077525	chr3,chr3	-,+	LHFPL4,MTMR14	3700,99280
chrX:130956799-130957618	chrX	+	130956808	130957403	True	NM_001042453,NR_026975	chrX,chrX	+,-	MST4,LOC286467	199841,7319
chr14:24108543-24108764	chr14	+	24108645	24108751	True	NM_032452,NM_005794,NM_182908	chr14,chr14,chr14	-,+,+	JPH4,DHRS2,DHRS2	-60636,-3123,-3123
chr6:31133322-31134358	chr6	+	31133544	31133614	True	NM_001105563,NM_007109,NM_001173531,NM_001105564,NM_001077511,NM_002701,NM_019052,NM_203289	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,+,-,-,+,-,-,-	CCHCR1,TCF19,POU5F1,CCHCR1,TCF19,POU5F1,CCHCR1,POU5F1	-7978,-7292,1051,-7978,-7292,4887,-7529,1051
chr6:31133322-31134358	chr6_mann_hap4	+	2481890	2481966	False	NM_001105563,NM_007109,NM_001173531,NM_001105564,NM_001077511,NM_002701,NM_019052,NM_203289	chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4	-,+,-,-,+,-,-,-	CCHCR1,TCF19,POU5F1,CCHCR1,TCF19,POU5F1,CCHCR1,POU5F1	-7946,-7266,1061,-7946,-7266,4904,-7497,1061
chr6:31133322-31134358	chr6_dbb_hap3	+	2430670	2430746	False	NM_001105563,NM_007109,NM_001173531,NM_001105564,NM_001077511,NM_002701,NM_019052,NM_203289	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	-,+,-,-,+,-,-,-	CCHCR1,TCF19,POU5F1,CCHCR1,TCF19,POU5F1,CCHCR1,POU5F1	-7976,-7296,1061,-7976,-7296,4903,-7527,1061
chr6:31133322-31134358	chr6_mcf_hap5	+	2515469	2515545	False	NM_001105563,NM_007109,NM_001173531,NM_001105564,NM_001077511,NM_002701,NM_019052,NM_203289	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	-,+,-,-,+,-,-,-	CCHCR1,TCF19,POU5F1,CCHCR1,TCF19,POU5F1,CCHCR1,POU5F1	-7946,-7266,1061,-7946,-7266,4904,-7497,1061
chr6:31133322-31134358	chr6_ssto_hap7	+	2468483	2468559	False	NM_007109,NM_001173531,NM_001077511,NM_002701,NM_203289	chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7	+,-,+,-,-	TCF19,POU5F1,TCF19,POU5F1,POU5F1	-7301,1061,-7301,4901,1061
chr6:31133322-31134358	chr6_qbl_hap6	+	2429398	2429474	False	NM_001105563,NM_007109,NM_001173531,NM_001105564,NM_001077511,NM_002701,NM_019052,NM_203289	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	-,+,-,-,+,-,-,-	CCHCR1,TCF19,POU5F1,CCHCR1,TCF19,POU5F1,CCHCR1,POU5F1	-7981,-7301,1061,-7981,-7301,4902,-7532,1061
chr6:31133322-31134358	chr6_cox_hap2	+	2648299	2648375	False	NM_001105563,NM_007109,NM_001173531,NM_001105564,NM_001077511,NM_002701,NM_019052,NM_203289	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	-,+,-,-,+,-,-,-	CCHCR1,TCF19,POU5F1,CCHCR1,TCF19,POU5F1,CCHCR1,POU5F1	-7976,-7296,1061,-7976,-7296,4903,-7527,1061
chr3:111805447-111805677	chr3	+	111805521	111805697	True	NM_001171747,NM_024616,NM_001190259	chr3,chr3,chr3	+,+,-	C3orf52,C3orf52,GCET2	-390,-390,46505
chrX:153097125-153097761	chrX	+	153097143	153097743	True	NM_032512,NM_006280	chrX,chrX	-,+	PDZD4,SSR4	-1140,-37175
chr5:158527522-158527815	chr5	+	158527523	158527715	True	NM_024007,NM_145049	chr5,chr5	-,+	EBF1,UBLCP1	-735,162373
chr19:10425699-10426050	chr19	+	10425839	10426068	True	NM_001031734,NM_001103167,NM_003259	chr19,chr19,chr19	-,-,+	FDX1L,ZGLP1,ICAM5	673,-5606,-25235
chr9:102583652-102583915	chr9	+	102583664	102583904	True	NM_173199,NM_015051,NM_173200,NM_006981	chr9,chr9,chr9,chr9	+,-,+,+	NR4A3,ERP44,NR4A3,NR4A3	232,277476,5104,232
chr6:26108001-26108233	chr6	+	26108034	26108240	True	NM_003542,NM_005323	chr6,chr6	+,-	HIST1H4C,HIST1H1T	-3909,174
chr9:46272414-46272698	chr9	+	46272481	46272747	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2641751,414818
chr9:46272414-46272698	chr9	+	67681472	67681550	False	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	112689,245210
chr9:46272414-46272698	chr9	-	47167907	47167985	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-3537177,-480392
chr9:46272414-46272698	chr9	-	45110572	45110764	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-120387,-1479842
chrX:105419526-105420177	chrX	+	105419532	105420030	True	NM_001171020,NM_152423,NM_000354	chrX,chrX,chrX	+,+,-	MUM1L1,MUM1L1,SERPINA7	-7293,-7293,-136814
chr8:133721272-133722982	chr8	+	133721282	133723014	True	NM_012472,NM_198513	chr8,chr8	-,+	LRRC6,PHF20L1	-33469,64589
chr8:27165079-27166378	chr8	+	27165227	27166347	True	NM_173174,NM_171982	chr8,chr8	+,-	PTK2B,TRIM35	2651,2537
chr11:64901141-64901416	chr11	+	64901183	64901393	True	NM_032431,NM_172230,NR_037568	chr11,chr11,chr11	-,-,+	SYVN1,SYVN1,MRPL49	660,660,-11520
chr6:150364008-150364457	chr6	+	150364017	150364357	True	NM_025218,NM_130900	chr6,chr6	+,-	ULBP1,RAET1L	-78925,-17349
chr11:61557630-61557876	chr11	+	61557653	61557813	True	NR_030342,NM_014206,NM_004111	chr11,chr11,chr11	-,-,+	MIR611,C11orf10,FEN1	2270,2322,2336
chr9:135458032-135458392	chr9	+	135458163	135458346	True	NM_022779,NM_020064	chr9,chr9	-,+	DDX31,BARHL1	87492,-221
chr17:66923116-66923693	chr17	+	66923475	66923741	True	NM_007168,NM_212472	chr17,chr17	-,+	ABCA8,PRKAR1A	27842,-414993
chr4:83956552-83956792	chr4	+	83956640	83956820	True	NM_016129,NM_001115007	chr4,chr4	+,-	COPS4,LIN54	-452,-22600
chr5:73939654-73940755	chr5	+	73939678	73940327	True	NM_003633,NM_000521	chr5,chr5	-,+	ENC1,HEXB	-2429,40641
chr11:62497840-62498136	chr11	+	62497861	62498033	True	NM_001079559,NR_037946,NM_173810	chr11,chr11,chr11	-,-,+	HNRNPUL2,HNRNPUL2-BSCL2,TTC9C	-3004,-3005,-1970
chr10:105833562-105833962	chr10	+	105833620	105833972	True	NM_145247,NM_000494	chr10,chr10	+,-	MEIR5,COL17A1	47843,11716
chr8:99953372-99953700	chr8	+	99953408	99953654	True	NM_053001,NM_006281,NM_001142462	chr8,chr8,chr8	+,-,+	OSR2,STK3,OSR2	2976,-115499,2976
chr13:108520320-108520534	chr13	+	108520324	108520529	True	NM_032859,NM_001080396	chr13,chr13	+,-	ABHD13,FAM155A	350233,-864
chr8:66556188-66556564	chr8	+	66556249	66556569	True	NM_018120,NM_014637,NM_001145839	chr8,chr8,chr8	-,+,+	ARMC1,MTFR1,MTFR1	-9797,318,318
chr1:169337398-169337682	chr1	+	169337397	169337697	True	NM_003666,NM_013330,NM_197972	chr1,chr1,chr1	+,-,-	BLZF1,NME7,NME7	-254,-211,-211
chr2:170513193-170514082	chr2	+	170513514	170513923	True	NM_001085447,NM_001008489	chr2,chr2	-,+	C2orf77,PHOSPHO2	37063,37040
chr8:102773486-102775444	chr8	+	102773498	102775463	True	NM_024915,NM_032041	chr8,chr8	+,-	GRHL2,NCALD	-268881,28032
chr8:143762184-143762387	chr8	+	143762254	143762350	True	NM_003724,NM_005672	chr8,chr8	-,+	JRK,PSCA	-10853,-431
chr11:130640096-130641545	chr11	+	130640134	130641506	True	NM_139055,NM_014758	chr11,chr11	+,-	ADAMTS15,SNX19	-321316,144926
chr19:58740551-58740785	chr19	+	58740567	58740833	True	NM_014480,NM_024620	chr19,chr19	+,-	ZNF544,ZNF329	-548,-78419
chr1:6482493-6482992	chr1	+	6482835	6482961	True	NM_019089,NR_036218,NM_031475	chr1,chr1,chr1	-,-,+	HES2,MIR4252,ESPN	-2856,7045,1886
chr9:36272540-36272787	chr9	+	36272638	36272785	True	NM_001128227,NM_001190388,NM_007096	chr9,chr9,chr9	-,-,+	GNE,GNE,CLTA	4327,4327,-81836
chr16:67144461-67144873	chr16	+	67144460	67144717	True	NM_025187,NM_033309	chr16,chr16	+,-	C16orf70,B3GNT9	-596,40242
chr8:95654976-95655410	chr8	+	95655033	95655387	True	NM_017697,NR_034034,NM_001122827,NM_001122825,NM_001034915,NM_001122826	chr8,chr8,chr8,chr8,chr8,chr8	+,-,+,+,+,+	ESRP1,LOC100288748,ESRP1,ESRP1,ESRP1,ESRP1	-1720,-3338,-1720,-1720,-1720,-1720
chr7:115850921-115851247	chr7	+	115851039	115851209	True	NM_015641,NM_012252	chr7,chr7	+,-	TES,TFEC	-543,-180241
chr9:19126474-19126759	chr9	+	19126528	19126765	True	NM_001122,NR_038064,NM_006570	chr9,chr9,chr9	-,-,+	PLIN2,PLIN2,RRAGA	890,890,-77207
chr1:52499502-52501102	chr1	+	52499538	52500995	True	NM_001136497,NM_138417	chr1,chr1	+,-	BTF3L4,KTI12	20861,-66
chr12:4702109-4702575	chr12	+	4702113	4702485	True	NM_006422,NM_003845	chr12,chr12	-,+	AKAP3,DYRK4	51916,-2921
chr15:69706729-69706934	chr15	+	69706732	69706930	True	NM_138555,NM_004856,NM_006305	chr15,chr15,chr15	+,+,-	KIF23,KIF23,ANP32A	-95,-95,-593471
chr6:3259278-3259482	chr6	+	3259319	3259441	True	NM_178012,NM_001135750,NM_001128591,NM_001128592	chr6,chr6,chr6,chr6	-,+,+,+	TUBB2B,PSMG4,PSMG4,PSMG4	-31351,-208,-208,-208
chr1:226017018-226017630	chr1	+	226017124	226017463	True	NM_000120,NM_014698	chr1,chr1	+,-	EPHX1,TMEM63A	-4173,53008
chr9:133322974-133324437	chr9	+	133323134	133324346	True	NM_000050,NR_027440,NM_054012	chr9,chr9,chr9	+,-,+	ASS1,LOC100272217,ASS1	-3091,130585,-3091
chr6:161124959-161125751	chr6	+	161125347	161125598	True	NM_000301,NM_001168338,NM_005577	chr6,chr6,chr6	+,+,-	PLG,PLG,LPA	-2173,-2173,-37940
chr1:158220249-158221737	chr1	+	158220407	158221558	True	NM_001763,NM_001764	chr1,chr1	+,-	CD1A,CD1B	2368,79814
chr16:15737201-15737581	chr16	+	15737258	15737432	True	NM_001143979,NM_001184998,NM_014647,NR_030159,NM_001184999,NM_017668	chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,+,-,+	NDE1,KIAA0430,KIAA0430,MIR484,KIAA0430,NDE1	-185,-235,-235,-158,-235,6650
chr8:37552331-37552759	chr8	+	37552398	37552684	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	616,52930
chr7:72988519-72989711	chr7	+	72988742	72989426	True	NM_001077621,NM_012453	chr7,chr7	+,-	VPS37D,TBL2	92747,3637
chr8:21835904-21836715	chr8	+	21835936	21836410	True	NM_003974,NM_182795	chr8,chr8	-,+	DOK2,NPM2	-64731,45943
chr20:26041316-26041930	chr20	+	26041366	26041844	True	NR_003678,NR_026713	chr20,chr20	-,+	C20orf191,FAM182A	52883,-6167
chr20:26041316-26041930	chr20	-	25775332	25775810	False	NR_004846,NR_027061,NR_026714	chr20,chr20,chr20	+,-,-	LOC100134868,FAM182B,FAM182B	214624,1118,6167
chr4:10687767-10689190	chr4	+	10687980	10689228	True	NR_030298,NM_052964	chr4,chr4	+,-	MIR572,CLNK	681222,-1594
chrX:101098051-101098737	chrX	+	101098156	101098781	True	NM_032946,NM_177948	chrX,chrX	-,+	NXF5,ARMCX3	13819,-219856
chr4:68443660-68444326	chr4	+	68443918	68444375	True	NM_012108,NM_001812	chr4,chr4	+,-	STAP1,CENPC1	-19523,-32662
chr13:39552190-39553568	chr13	+	39552724	39553610	True	NM_001012754,NM_001144033	chr13,chr13	+,-	NHLRC3,STOML3	58844,11442
chr13:36859609-36859832	chr13	+	36859785	36859854	True	NM_001198910,NM_001111046	chr13,chr13	-,+	C13orf38-SOHLH2,CCNA1	12189,146112
chrX:74495704-74496160	chrX	+	74495847	74496206	True	NM_145052,NM_004299,NR_030774	chrX,chrX,chrX	+,-,+	UPRT,ABCB7,UPRT	-2004,-119715,-2004
chr3:128879500-128879941	chr3	+	128879501	128879983	True	NM_001199469,NM_001204890,NM_016128,NM_020701	chr3,chr3,chr3,chr3	-,-,+,-	ISY1,ISY1-RAB43,COPG,ISY1	140,140,88469,140
chr7:39991266-39991525	chr7	+	39991427	39991573	True	NM_031267,NM_138701,NM_003718	chr7,chr7,chr7	+,-,+	CDK13,C7orf11,CDK13	-1519,182728,-1519
chr2:191208114-191208334	chr2	+	191208117	191208345	True	NM_001128928,NM_198047,NM_002194	chr2,chr2,chr2	+,-,+	INPP1,HIBCH,INPP1	28,-23346,28
chr2:132555313-132555581	chr2	+	132555313	132555437	True	NM_013310,NM_214461	chr2,chr2	+,-	C2orf27A,C2orf27B	-75300,3847
chr2:132555313-132555581	chr2	-	132522090	132522140	False	NM_013310,NM_214461	chr2,chr2	+,-	C2orf27A,C2orf27B	-42077,37144
chr18:75702797-75703024	chr18	+	75702836	75703026	True	NM_001480,NM_001025100	chr18,chr18	+,-	GALR1,MBP	-740883,-858062
chr2:122285889-122287178	chr2	+	122285948	122287083	True	NR_023343,NM_001142273	chr2,chr2	+,-	RNU4ATAC,CLASP1	1372,120019
chr19:55850139-55850709	chr19	+	55850245	55850565	True	NM_001085488,NM_032701	chr19,chr19	-,+	TMEM150B,SUV420H2	-13537,655
chr2:203502139-203502690	chr2	+	203502246	203502580	True	NM_178231,NM_173511	chr2,chr2	-,+	ICA1L,FAM117B	233679,-2406
chr18:29793519-29795507	chr18	+	29793582	29795482	True	NM_005925,NM_022751	chr18,chr18	+,-	MEP1B,FAM59A	-23646,255019
chr1:50888113-50888330	chr1	+	50888185	50888277	True	NM_021952,NM_032110	chr1,chr1	+,-	ELAVL4,DMRTA2	-313642,914
chr17:39204490-39204920	chr17	+	39204735	39204899	True	NM_033032,NM_001123387,NM_030967,NM_033061	chr17,chr17,chr17,chr17	-,-,-,+	KRTAP2-2,KRTAP2-1,KRTAP1-1,KRTAP4-7	6620,-1167,-7022,35559
chr12:100753106-100755100	chr12	+	100753203	100754841	True	NM_001145288,NM_152317,NM_139319	chr12,chr12,chr12	+,-,+	SLC17A8,DEPDC4,SLC17A8	-2404,-92346,-2404
chr11:72505112-72506128	chr11	+	72505341	72506131	True	NM_033388,NM_006645	chr11,chr11	+,-	ATG16L2,STARD10	19319,-591
chr7:97601029-97601318	chr7	+	97601029	97601295	True	NR_002822,NM_014916	chr7,chr7	-,+	MGC72080,LMTK2	393,134901
chr7:104662415-104663982	chr7	+	104662522	104663604	True	NM_182931,NR_024586,NM_018682	chr7,chr7,chr7	+,-,+	MLL5,LOC100216545,MLL5	-7943,-7934,-7943
chr15:91791044-91791405	chr15	+	91791060	91791291	True	NM_014848,NM_018668	chr15,chr15	+,-	SV2B,VPS33B	-147573,-225227
chr7:23571604-23572025	chr7	+	23571749	23571928	True	NM_013293,NR_026676	chr7,chr7	-,+	TRA2A,RPS2P32	-93,-41793
chr16:31718506-31720455	chr16	+	31718673	31720274	True	NR_027011,NR_024034,NM_001130913	chr16,chr16,chr16	-,+,+	CSDAP1,KIAA0664L3,ZNF720	-137828,-6792,4275
chr18:55889956-55891310	chr18	+	55890312	55891351	True	NM_001144966,NM_052947	chr18,chr18	+,-	NEDD4L,ALPK2	-1603,404888
chr1:171161032-171161759	chr1	+	171161260	171161566	True	NR_031627,NM_001460	chr1,chr1	-,+	MIR1295,FMO2	-90313,-6940
chr8:105479860-105481311	chr8	+	105480021	105480708	True	NM_001385,NM_030788	chr8,chr8	-,+	DPYS,TM7SF4	-744,-128031
chr10:5409788-5410260	chr10	+	5409915	5410305	True	NM_001171864,NM_053049	chr10,chr10	-,+	TUBAL3,UCN3	36538,-2990
chr19:57789183-57790442	chr19	+	57789221	57789669	True	NM_001012729,NM_006635	chr19,chr19	-,+	DUXA,ZNF460	-110365,2183
chr6:151644610-151645413	chr6	+	151644848	151645398	True	NM_144497,NM_020861	chr6,chr6	+,-	AKAP12,ZBTB2	1267,67329
chr5:75028469-75029293	chr5	+	75028813	75029092	True	NM_016218,NM_001099271	chr5,chr5	+,-	POLK,POC5	-221217,-15500
chr16:85220732-85220994	chr16	+	85220744	85220956	True	NR_033984,NM_198491	chr16,chr16	+,-	LOC400548,FAM92B	-50039,-74630
chrX:101396961-101397196	chrX	+	101396964	101397170	True	NM_001006938,NM_080390	chrX,chrX	-,+	TCEAL6,TCEAL2	268,-16355
chr2:74605330-74607131	chr2	+	74605382	74607157	True	NM_001135040,NM_001135041,NM_023019,NM_001190837,NR_024463,NM_004082	chr2,chr2,chr2,chr2,chr2,chr2	-,-,-,-,+,-	DCTN1,DCTN1,DCTN1,DCTN1,LOC100189589,DCTN1	375,-3520,-3520,375,5687,375
chr16:30487494-30488075	chr16	+	30487633	30487956	True	NM_012248,NM_002209,NM_001114380	chr16,chr16,chr16	-,+,+	SEPHS2,ITGAL,ITGAL	-30409,-3707,-3707
chr17:29718490-29718690	chr17	+	29718495	29718739	True	NM_014210,NM_032932	chr17,chr17	-,+	EVI2A,RAB11FIP4	-69728,82
chr12:52583061-52583322	chr12	+	52583214	52583334	True	NM_182507,NM_001081492,NR_027358	chr12,chr12,chr12	-,-,+	KRT80,KRT80,LOC283404	2500,2500,21379
chrY:1469589-1469962	chrY	+	1469749	1469873	True	NM_001636,NR_026710,NR_026711	chrY,chrY,chrY	-,+,+	SLC25A6,ASMTL-AS1,ASMTL-AS1	-8710,-376,-376
chrY:1469589-1469962	chrX	+	1519749	1519873	False	NM_001636,NR_026710,NR_026711	chrX,chrX,chrX	-,+,+	SLC25A6,ASMTL-AS1,ASMTL-AS1	-8710,-376,-376
chrY:1659545-1660259	chrY	+	1660140	1660208	True	NM_005088,NR_027383,NM_004043,NM_178129	chrY,chrY,chrY,chrY	+,+,+,-	AKAP17A,AKAP17A,ASMT,P2RY8	277,277,4139,-54103
chrY:1659545-1660259	chrX	+	1710140	1710208	False	NM_005088,NR_027383,NM_004043,NM_178129	chrX,chrX,chrX,chrX	+,+,+,-	AKAP17A,AKAP17A,ASMT,P2RY8	277,277,4139,-54103
chr3:36956601-36958327	chr3	+	36957016	36958196	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	28402,76644
chr17:79922127-79923348	chr17	+	79922285	79923006	True	NM_178493,NM_024083	chr17,chr17	-,+	NOTUM,ASPSCR1	-3228,12419
chr17:76208442-76208943	chr17	+	76208473	76208869	True	NM_001168,NR_002219,NM_001012271,NM_001012270	chr17,chr17,chr17,chr17	+,-,+,+	BIRC5,EPR1,BIRC5,BIRC5	1407,11970,1407,1407
chr5:141063726-141064544	chr5	+	141063745	141064594	True	NM_022481,NM_173828	chr5,chr5	-,+	ARAP3,RELL2	-1945,-47279
chr10:99528910-99529175	chr10	+	99528910	99529148	True	NM_003015,NM_001002261	chr10,chr10	-,+	SFRP5,ZFYVE27	2658,-30727
chr14:23561126-23561585	chr14	+	23561244	23561600	True	NM_001164815,NM_001164814,NM_017924,NM_014977	chr14,chr14,chr14,chr14	-,-,+,-	ACIN1,ACIN1,C14orf119,ACIN1	3281,3281,3187,3281
chr16:66916630-66918315	chr16	+	66916654	66918341	True	NM_020786,NM_001204744	chr16,chr16	+,-	PDP2,CDH16	-2323,34596
chr12:132689171-132689756	chr12	+	132689171	132689735	True	NM_024078,NM_021808	chr12,chr12	+,-	NOC4L,GALNT9	-60229,888
chr2:74210848-74211216	chr2	+	74210877	74211235	True	NM_080918,NM_001035505	chr2,chr2	+,-	DGUOK,BOLA3	-56975,163854
chr3:52030008-52030274	chr3	+	52030008	52030184	True	NM_000992,NM_001198898	chr3,chr3	-,+	RPL29,ACY1	-50,-12759
chr17:15462365-15463464	chr17	+	15462482	15463350	True	NM_145301,NM_001135036,NR_037924,NM_001204478,NM_001130842	chr17,chr17,chr17,chr17,chr17	-,-,-,-,+	FAM18B2,FAM18B2,FAM18B2-CDRT4,FAM18B2-CDRT4,ZNF286A	3646,3646,3646,3646,139540
chr17:15462365-15463464	chr17	-	18688382	18688861	False	NM_016078,NM_001145045	chr17,chr17	+,-	FAM18B1,ZNF286B	-3852,-102810
chr12:56657753-56658062	chr12	+	56657760	56657831	True	NM_173595,NM_144576,NM_001099337	chr12,chr12,chr12	-,+,+	ANKRD52,COQ10A,COQ10A	-5617,2810,3235
chr1:187318822-187320743	chr1	+	187319256	187320691	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-669697,-521281
chrX:13059452-13060076	chrX	+	13059617	13060112	True	NM_021109,NM_174901	chrX,chrX	+,-	TMSB4X,FAM9C	-66451,2856
chr9:140119418-140119700	chr9	+	140119590	140119720	True	NM_001190228,NM_080877,NM_001177316,NM_001177317,NM_031297,NM_199001	chr9,chr9,chr9,chr9,chr9,chr9	+,+,+,+,-,+	LOC643596,SLC34A3,SLC34A3,SLC34A3,RNF208,C9orf169	2297,5664,5488,5488,-3815,3
chr17:42635155-42635563	chr17	+	42635248	42635550	True	NM_001466,NR_036474	chr17,chr17	+,-	FZD2,GPATCH8	-487,-54291
chr17:7297086-7297301	chr17	+	7297144	7297206	True	NM_020360,NM_003985,NM_001201576	chr17,chr17,chr17	-,+,-	PLSCR3,TNK1,PLSCR3	1006,-12830,1006
chr1:28588566-28589330	chr1	+	28588606	28588880	True	NM_031459,NM_014280	chr1,chr1	+,-	SESN2,DNAJC8	-2694,-29064
chr17:8703891-8705456	chr17	+	8703984	8705148	True	NM_152599,NM_004822	chr17,chr17	-,+	MFSD6L,NTN1	-1317,219710
chr1:155263351-155264327	chr1	+	155263586	155264341	True	NM_001135822,NM_000298,NM_181871	chr1,chr1,chr1	+,-,-	FDPS,PKLR,PKLR	14197,6934,6501
chr9:125546598-125548387	chr9	+	125546643	125548352	True	NM_001001923,NM_005388	chr9,chr9	+,-	OR5C1,PDCL	2859,42634
chr2:204190885-204192741	chr2	+	204190886	204192615	True	NM_213589,NM_005759	chr2,chr2	-,+	RAPH1,ABI2	207493,387
chr20:21496706-21497908	chr20	+	21496725	21497615	True	NM_002509,NM_006192	chr20,chr20	-,+	NKX2-2,PAX1	-2061,188681
chr14:75520311-75521948	chr14	+	75520407	75521625	True	NM_001042430,NM_203488,NM_001107,NM_014381,NM_001040108	chr14,chr14,chr14,chr14,chr14	+,-,-,-,-	FAM164C,ACYP1,ACYP1,MLH3,MLH3	14673,9161,9161,-2172,-2172
chr9:108041402-108041689	chr9	+	108041484	108041554	True	NM_080546,NM_005502	chr9,chr9	+,-	SLC44A1,ABCA1	-34608,-350957
chr10:44878905-44879252	chr10	+	44878941	44879155	True	NM_001178134,NM_000609,NM_199168,NR_033846,NM_001033886	chr10,chr10,chr10,chr10,chr10	-,-,-,+,-	CXCL12,CXCL12,CXCL12,LOC283033,CXCL12	1440,1440,1440,-474240,1440
chr17:43568320-43568550	chr17_ctg5_hap1	+	183403	183667	False	NM_014798,NR_027774,NR_027782,NM_001113738	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	-,-,-,+	PLEKHM1,PLEKHM1,PLEKHM1,ARL17A	-189,-189,-189,12053
chr17:43568320-43568550	chr17	+	43568332	43568596	True	NR_037772,NM_014798,NR_027774,NR_027782	chr17,chr17,chr17,chr17	+,-,-,-	CRHR1,PLEKHM1,PLEKHM1,PLEKHM1	129113,-186,-186,-186
chr17:43568320-43568550	chr17	+	62833489	62833683	False	NR_024386,NM_001165933	chr17,chr17	-,+	PLEKHM1P,RGS9	-187,299772
chr17:36245615-36246456	chr17	+	36245761	36246256	True	NM_032258,NR_024178	chr17,chr17	+,-	TBC1D3F,LOC284100	37703,-1398
chr10:50746986-50747286	chr10	+	50747030	50747294	True	NM_020984,NM_000124	chr10,chr10	+,-	CHAT,ERCC6	69846,-23
chr19:19881118-19882831	chr19	+	19882140	19882750	True	NM_021047,NR_026956	chr19,chr19	+,-	ZNF253,LOC284440	93963,4522
chr15:52860290-52860557	chr15	+	52860389	52860603	True	NM_006628,NM_002748	chr15,chr15	-,+	ARPP19,MAPK6	660,-549034
chr13:100635854-100636274	chr13	+	100635866	100636177	True	NM_033132,NM_007129	chr13,chr13	-,+	ZIC5,ZIC2	-11688,-1891
chr16:421565-422110	chr16	+	421838	422040	True	NM_021259,NM_006428,NR_024453	chr16,chr16,chr16	-,-,+	TMEM8A,MRPL28,LOC100134368	9960,-1269,10200
chr6:32938951-32940052	chr6_qbl_hap6	+	4171899	4171963	False	NR_037625,NM_001113182,NM_005104,NM_006120,NM_001199455,NM_001199456	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	+,+,+,-,+,+	BRD2,BRD2,BRD2,HLA-DMA,BRD2,BRD2	-1142,-1142,-3370,-18871,-435,1041
chr6:32938951-32940052	chr6_mcf_hap5	+	4276620	4276684	False	NR_037625,NM_001113182,NM_005104,NM_006120,NM_001199455,NM_001199456	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	+,+,+,-,+,+	BRD2,BRD2,BRD2,HLA-DMA,BRD2,BRD2	-1142,-1142,-3370,-18865,-435,1041
chr6:32938951-32940052	chr6_mann_hap4	+	4396982	4397046	False	NR_037625,NM_001113182,NM_005104,NM_006120,NM_001199455,NM_001199456	chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4	+,+,+,-,+,+	BRD2,BRD2,BRD2,HLA-DMA,BRD2,BRD2	-1142,-1142,-3370,-18871,-435,1041
chr6:32938951-32940052	chr6	+	32939755	32939819	True	NR_037625,NM_001113182,NM_005104,NM_006120,NM_001199455,NM_001199456	chr6,chr6,chr6,chr6,chr6,chr6	+,+,+,-,+,+	BRD2,BRD2,BRD2,HLA-DMA,BRD2,BRD2	-1142,-1142,-3370,-18856,-435,1041
chr6:32938951-32940052	chr6_cox_hap2	+	4384293	4384357	False	NR_037625,NM_001113182,NM_005104,NM_006120,NM_001199455,NM_001199456	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,+,+,-,+,+	BRD2,BRD2,BRD2,HLA-DMA,BRD2,BRD2	-1142,-1142,-3370,-18865,-435,1041
chr17:54991279-54991509	chr17	+	54991370	54991460	True	NM_021626,NM_005082	chr17,chr17	+,-	SCPEP1,TRIM25	64007,-1
chr9:134363162-134364355	chr9	+	134363181	134364267	True	NR_003050,NR_002914,NM_001135954	chr9,chr9,chr9	+,+,-	SNORD62B,SNORD62A,UCK1	1605,1605,42445
chr11:62413613-62413817	chr11	+	62413741	62413827	True	NM_001043229,NM_030628,NM_198335,NM_198334	chr11,chr11,chr11,chr11	+,-,-,-	METTL12,INTS5,GANAB,GANAB	18951,6997,327,327
chr2:24348521-24349572	chr2	+	24348802	24349453	True	NM_199346,NM_001145710	chr2,chr2	-,+	PFN4,LOC375190	-2651,-2512
chr10:74852769-74853317	chr10	+	74852991	74853275	True	NM_001142595,NM_001017962,NM_001142596,NM_000917,NM_015901	chr10,chr10,chr10,chr10,chr10	-,-,-,-,+	P4HA1,P4HA1,P4HA1,P4HA1,NUDT13	3517,3517,3517,3517,16934
chr4:25514261-25514909	chr4	+	25514275	25514548	True	NM_015187,NM_013367	chr4,chr4	-,+	SEL1L3,ANAPC4	350112,-135478
chr22:19435838-19436468	chr22	+	19435886	19436501	True	NM_001166242,NM_173793,NM_003776	chr22,chr22,chr22	-,-,+	C22orf39,C22orf39,MRPL40	-131,-131,-15901
chr20:57618055-57618315	chr20	+	57618192	57618294	True	NR_037930,NM_016045,NR_037929,NM_030773	chr20,chr20,chr20,chr20	-,-,-,+	SLMO2-ATP5E,SLMO2,SLMO2-ATP5E,TUBB1	-291,-291,-291,-23934
chr9:139892887-139893154	chr9	+	139892974	139893086	True	NM_004669,NM_183241	chr9,chr9	-,+	CLIC3,C9orf142	-1950,-6155
chr3:193097748-193098846	chr3	+	193097835	193098837	True	NR_026877,NM_198505	chr3,chr3	+,-	MGC2889,ATP13A5	-138326,-1321
chrX:153145073-153145430	chrX	+	153145153	153145383	True	NM_000425,NM_001143963,NM_024003,NR_027419	chrX,chrX,chrX,chrX	-,-,-,+	L1CAM,L1CAM,L1CAM,AVPR2	-3754,-3754,-3754,22601
chr5:132199172-132199859	chr5	+	132199363	132199821	True	NM_014402,NM_052971,NM_005260	chr5,chr5,chr5	+,+,-	UQCRQ,LEAP2,GDF9	2497,9536,707
chr19:9945591-9945802	chr19	+	9945596	9945750	True	NM_001048241,NM_024292,NM_006221,NM_017703	chr19,chr19,chr19,chr19	+,+,+,-	UBL5,UBL5,PIN1,FBXL12	-7079,-7079,248,-15865
chr20:62795686-62797438	chr20	+	62795866	62797139	True	NM_004535,NM_005286	chr20,chr20	+,-	MYT1,NPBWR2	-90,-57682
chr5:39218576-39219324	chr5	+	39218896	39219336	True	NM_199335,NM_001465,NM_003999	chr5,chr5,chr5	-,-,+	FYB,FYB,OSMR	381,381,-372846
chr1:55672555-55674155	chr1	+	55672761	55674024	True	NM_015306,NM_174936	chr1,chr1	-,+	USP24,PCSK9	7069,-167663
chr17:59478515-59478888	chr17	+	59478524	59478842	True	NM_199290,NM_005994	chr17,chr17	-,+	NACA2,TBX2	189771,-1318
chr12:100674897-100675466	chr12	+	100675075	100675196	True	NM_017988,NM_152317	chr12,chr12	+,-	SCYL2,DEPDC4	-13586,-14218
chr19:39899351-39900177	chr19	+	39899630	39900078	True	NM_019088,NM_003407,NM_022835	chr19,chr19,chr19	-,+,+	PAF1,ZFP36,PLEKHG2	-17951,-2196,3671
chr5:140097761-140098059	chr5	+	140097920	140098105	True	NR_026705,NR_026704,NM_002109,NR_026703	chr5,chr5,chr5,chr5	+,+,-,+	VTRNA1-3,VTRNA1-2,HARS,VTRNA1-1	7638,405,-26949,-7110
chr17:20944833-20945239	chr17	+	20944926	20945150	True	NM_015276,NM_015510	chr17,chr17	-,+	USP22,DHRS7B	1252,85107
chr19:13029959-13030172	chr19	+	13030030	13030110	True	NM_001105578,NM_004343	chr19,chr19	-,+	SYCE2,CALR	26,19303
chr19:16038839-16040285	chr19	+	16038839	16040313	True	NM_001004465,NM_021187,NM_001128932	chr19,chr19,chr19	+,-,-	OR10H4,CYP4F11,CYP4F11	19504,5413,5413
chr8:7444594-7445860	chr8	+	7444610	7445890	True	NM_001040705,NM_001136572	chr8,chr8	+,-	DEFB107B,FAM90A7	-91294,-4435
chr8:7444594-7445860	chr8	-	7109434	7109485	False	NR_027000,NM_001164456,NM_001164452	chr8,chr8,chr8	-,+,+	LOC349196,FAM90A13,FAM90A14	11580,4940,4940
chr8:7444594-7445860	chr8	-	7567973	7568024	False	NM_001164456,NM_001037668,NM_001164452	chr8,chr8,chr8	+,-,+	FAM90A13,DEFB107A,FAM90A14	4940,105265,4940
chr8:7444594-7445860	chr8	+	7893130	7893882	False	NR_027424,NR_003668	chr8,chr8	+,-	FAM66E,DEFB109P1B	-80647,-38087
chr22:41697227-41697467	chr22	+	41697267	41697395	True	NM_017590,NM_002883	chr22,chr22	+,-	ZC3H7B,RANGAP1	171,-15051
chr14:64970136-64970341	chr14	+	64970161	64970253	True	NM_006977,NM_001123329,NM_014950	chr14,chr14,chr14	-,+,+	ZBTB25,ZBTB1,ZBTB1	351,1038,1038
chr2:25391754-25392583	chr2	+	25391814	25392582	True	NM_001035256,NM_000939,NM_014971	chr2,chr2,chr2	-,-,+	POMC,POMC,EFR3B	-255,-255,-126892
chr4:17821994-17823381	chr4	+	17822298	17822959	True	NM_017741,NM_022346	chr4,chr4	-,+	DCAF16,NCAPG	-9917,-9833
chr6:30910083-30910445	chr6_qbl_hap6	+	2203102	2203366	False	NM_205854,NM_080870	chr6_qbl_hap6,chr6_qbl_hap6	-,+	SFTA2,DPCR1	-10179,-1403
chr6:30910083-30910445	chr6_mcf_hap5	+	2292071	2292335	False	NM_205854,NM_080870	chr6_mcf_hap5,chr6_mcf_hap5	-,+	SFTA2,DPCR1	-10180,-1404
chr6:30910083-30910445	chr6_cox_hap2	+	2422034	2422298	False	NM_205854,NM_080870	chr6_cox_hap2,chr6_cox_hap2	-,+	SFTA2,DPCR1	-10159,-1395
chr6:30910083-30910445	chr6	+	30910130	30910394	True	NM_205854,NM_080870	chr6,chr6	-,+	SFTA2,DPCR1	-10178,-1404
chr6:30910083-30910445	chr6_dbb_hap3	+	2204245	2204509	False	NM_205854,NM_080870	chr6_dbb_hap3,chr6_dbb_hap3	-,+	SFTA2,DPCR1	-10183,-1403
chr1:78445860-78447769	chr1	+	78445859	78447787	True	NM_007034,NM_003902	chr1,chr1	+,-	DNAJB4,FUBP1	22848,-1082
chrX:51806593-51806838	chrX	+	51806639	51806859	True	NM_001098800,NM_177537,NM_177535,NM_030801,NR_003712,NR_003711	chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,+,-	MAGED4,MAGED4B,MAGED4B,MAGED4B,SNORA11E,SNORA11D	5470,5559,5559,5559,-247,-70
chrX:51806593-51806838	chrX	-	51933427	51933647	False	NM_001098800,NM_177537,NM_177535,NM_030801,NR_003712,NR_003711	chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,-,+	MAGED4,MAGED4B,MAGED4B,MAGED4B,SNORA11E,SNORA11D	-5470,-5559,-5559,-5559,247,70
chr11:64864531-64866380	chr11	+	64864739	64866379	True	NM_013265,NM_080668	chr11,chr11	+,-	C11orf2,CDCA5	-1109,-13124
chr2:97934758-97935210	chr2	+	97935024	97935120	True	NM_199336,NM_001164315	chr2,chr2	-,+	FAHD2B,ANKRD36	-174442,-155843
chr2:97934758-97935210	chr2	-	98104157	98104253	False	NM_025190,NM_001862	chr2,chr2	-,+	ANKRD36B,COX5B	102226,158267
chrX:109764796-109765273	chr3	+	46622649	46622699	True	NM_003212,NM_024512,NM_001174136	chr3,chr3,chr3	+,-,+	TDGF1,LRRC2,TDGF1	-3624,-14638,-6655
chr1:200839923-200840939	chr1	+	200840006	200840959	True	NM_005298,NM_017596	chr1,chr1	+,-	GPR25,KIF21B	1206,151919
chr17:8187223-8188786	chr17	+	8187684	8188836	True	NM_201520,NM_001177802,NM_016492,NM_001177801	chr17,chr17,chr17,chr17	-,+,+,+	SLC25A35,RANGRF,RANGRF,RANGRF	9386,3132,3132,3132
chr5:178449944-178450409	chr5	+	178449947	178450091	True	NM_001136116,NM_000843	chr5,chr5	+,-	ZNF879,GRM6	684,-27823
chr5:1113475-1114122	chr5	+	1113481	1114107	True	NM_001003841,NM_006598	chr5,chr5	+,-	SLC6A19,SLC12A7	87602,-1309
chr6:159062762-159064672	chr6	+	159062964	159064381	True	NM_006519,NM_001009991	chr6,chr6	-,+	DYNLT1,SYTL3	1474,6664
chr11:62477225-62478593	chr11	+	62477270	62478354	True	NM_001130702,NR_037949,NR_037948,NM_001122955,NM_012202,NM_032667	chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,+,-	BSCL2,BSCL2,BSCL2,BSCL2,GNG3,BSCL2	-3483,-179,-179,-2091,-2207,-3483
chr7:104897190-104898278	chr7	+	104897284	104898143	True	NM_182931,NM_182691	chr7,chr7	+,-	MLL5,SRPK2	-242698,11391
chrX:193810-194974	chrY	+	144956	145020	False	NR_028057,NM_018390,NM_012227	chrY,chrY,chrY	+,+,-	PLCXD1,PLCXD1,GTPBP6	-2016,3040,35917
chrX:193810-194974	chrX	+	194956	195020	True	NR_028057,NM_018390,NM_012227	chrX,chrX,chrX	+,+,-	PLCXD1,PLCXD1,GTPBP6	-2016,3040,35917
chr10:51475544-51475916	chr10	+	51475824	51475890	True	NM_001077685,NM_002443	chr10,chr10	-,+	AGAP7,MSMB	10491,73662
chr7:26192732-26193116	chr7	+	26192830	26193150	True	NM_002137,NM_004289	chr7,chr7	-,+	HNRNPA2B1,NFE2L3	47313,-1034
chr15:84323961-84324494	chr15	+	84323978	84324494	True	NM_207517,NM_001717	chr15,chr15	+,-	ADAMTSL3,BNC1	-1191,-370510
chr9:42716654-42717684	chr9	+	42717107	42717593	True	NR_026759,NM_199244,NM_001099279	chr9,chr9,chr9	-,+,+	FAM95B1,FOXD4L4,FOXD4L2	315769,45,45
chr9:42716654-42717684	chr9	-	70178455	70178941	False	NM_001126334,NR_024443	chr9,chr9	-,+	FOXD4L5,LOC100133920	-45,-527145
chr9:42716654-42717684	chr9	-	70429371	70429857	False	NM_199244,NM_201453,NM_001099279	chr9,chr9,chr9	-,+,-	FOXD4L4,CBWD3,FOXD4L2	-45,426981,-45
chr17:43663135-43663397	chr17_ctg5_hap1	+	527529	528049	False	NM_001193465,NR_034172	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	KIAA1267,LOC644246	35448,67387
chr17:43663135-43663397	chr17_ctg5_hap1	-	1204881	1204931	False	NR_026901,NR_037772	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LOC644172,CRHR1	-16493,-34428
chr17:43663135-43663397	chr17_ctg5_hap1	-	1424432	1424482	False	NR_002940,NM_016632	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LRRC37A4,ARL17A	56894,89452
chr17:43663135-43663397	chr17	+	43663223	43663329	True	NR_026901,NR_037772	chr17,chr17	-,+	LOC644172,CRHR1	16469,34380
chr18:34412958-34414239	chr18	+	34413198	34413994	True	NM_020776,NM_015476	chr18,chr18	+,-	KIAA1328,C18orf10	-4183,-4040
chr2:132231390-132231761	chr2	+	132231411	132231675	True	NM_001085365,NM_080386	chr2,chr2	-,+	MZT2A,TUBA3D	18449,1990
chr2:132231390-132231761	chr2	-	130957978	130958140	False	NM_025029,NM_207312	chr2,chr2	+,-	MZT2B,TUBA3E	-18538,-1944
chr20:31753690-31753981	chr20	+	31753689	31753751	True	NM_080574,NM_080675	chr20,chr20	+,-	C20orf70,SUN5	2208,-161450
chr21:11171267-11171847	chr21	+	11171281	11171885	True	NM_001187,NR_037458	chr21,chr21	-,+	BAGE,MIR3687	-72344,-1345137
chr21:40552993-40554608	chr21	+	40552994	40554578	True	NM_004627,NM_203433,NM_003720	chr21,chr21,chr21	+,-,-	WRB,PSMG1,PSMG1	197634,912,912
chr2:110979173-110979781	chr2	+	110979221	110979810	True	NR_027063,NR_037626	chr2,chr2	-,+	NCRNA00116,LOC100507334	758,23404
chr13:37007836-37009204	chr13	+	37008181	37009246	True	NM_001111046,NM_001142294,NM_003914,NM_001111047,NM_001111045	chr13,chr13,chr13,chr13,chr13	+,-,+,+,+	CCNA1,SPG20,CCNA1,CCNA1,CCNA1	-2265,-63864,-1823,-2265,-1823
chr13:25744272-25744472	chr13	+	25744276	25744490	True	NM_199138,NM_152704,NM_030979	chr13,chr13,chr13	-,-,+	FAM123A,FAM123A,PABPC3	1417,1417,-74051
chr20:20343632-20344715	chr20	+	20343710	20344665	True	NM_002196,NM_016652	chr20,chr20	+,-	INSM1,CRNKL1	4099,-307020
chr9:27005988-27006402	chr9	+	27006263	27006341	True	NM_025103,NM_022901	chr9,chr9	+,-	IFT74,LRRC19	-49954,-572
chr16:3069539-3069860	chr16	+	3069676	3069743	True	NM_001142350,NM_024339,NM_017885,NM_001002017,NM_016639,NM_021195,NM_020982,NM_001002018	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,-,-,+,-,+,-	THOC6,THOC6,HCFC1R1,HCFC1R1,TNFRSF12A,CLDN6,CLDN9,HCFC1R1	4288,4288,4601,4601,569,-1488,-7270,4601
chr12:16759389-16759791	chr12	+	16759408	16759820	True	NM_018640,NM_001001395,NM_145764	chr12,chr12,chr12	-,-,+	LMO3,LMO3,MGST1	23,1254,-253108
chr16:62069355-62069688	chr16	+	62069474	62069702	True	NM_001796,NM_024860	chr16,chr16	-,+	CDH8,SETD6	1087,-3520142
chr9:37799287-37799630	chr9	+	37799323	37799647	True	NM_001002269,NM_024345	chr9,chr9	-,+	EXOSC3,DCAF10	-14256,1142
chr22:25380979-25381397	chr22	+	25380989	25381257	True	NM_001001663,NM_001145206	chr22,chr22	-,+	TMEM211,KIAA1671	-45675,42683
chr9:111619258-111619883	chr9	+	111619562	111619910	True	NM_006687,NM_006686	chr9,chr9	+,-	ACTL7A,ACTL7B	4692,-1287
chr19:46087971-46089251	chr19	+	46088102	46088922	True	NM_003370,NM_001017989,NM_025136	chr19,chr19,chr19	+,-,-	VASP,OPA3,OPA3	-77465,20,20
chr7:16790080-16791476	chr7	+	16790313	16791518	True	NM_006408,NM_014399	chr7,chr7	-,+	AGR2,TSPAN13	53270,1832
chr17:17289107-17289717	chr17	+	17289111	17289585	True	NM_003653,NM_020201	chr17,chr17	-,+	COPS3,NT5M	-104494,-82482
chr3:121796625-121796981	chr3	+	121796632	121797008	True	NM_006889,NM_001199799	chr3,chr3	+,-	CD86,ILDR1	67,-55505
chr2:47798599-47798890	chr2	+	47798615	47798919	True	NM_022055,NM_000251	chr2,chr2	-,+	KCNK12,MSH2	-1145,-168403
chr1:112083055-112084904	chr1	+	112083074	112084933	True	NM_001081976,NM_174896	chr1,chr1	-,+	ADORA3,C1orf162	21714,-66521
chr7:48129990-48131613	chr7	+	48130155	48131562	True	NM_181597,NM_003364,NM_152782	chr7,chr7,chr7	+,+,-	UPP1,UPP1,SUN3	-1855,-1464,-61439
chr2:88928345-88928693	chr2	+	88928346	88928708	True	NM_144563,NM_004836	chr2,chr2	+,-	RPIA,EIF2AK3	62467,-1252
chr2:220496080-220496470	chr2	+	220496079	220496491	True	NM_001173408,NM_005070,NM_201574	chr2,chr2,chr2	-,+,+	OBSL1,SLC4A3,SLC4A3	-59811,-3838,-3838
chr11:89225012-89226274	chr11	+	89225299	89226258	True	NM_001143836,NM_153696,NM_016931,NR_026571	chr11,chr11,chr11,chr11	-,+,-,-	NOX4,FOLH1B,NOX4,NOX4	-646,166206,-646,-646
chr12:52626844-52627066	chr12	+	52626964	52627100	True	NM_182507,NM_005556	chr12,chr12	-,+	KRT80,KRT7	-41180,-61
chr5:131749925-131751399	chr5	+	131750439	131751070	True	NM_001013717,NR_037898	chr5,chr5	+,-	C5orf56,LOC553103	-3817,-44831
chr19:35605588-35605808	chr19	+	35605717	35605783	True	NM_001136012,NM_001136010,NM_001136011,NM_021910,NR_024562,NR_024561,NM_001136009,NM_001136008,NM_001136007,NM_005971	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,-,-,+,+,+,+	FXYD3,FXYD3,FXYD3,FXYD3,LOC100128675,LOC100128675,FXYD3,FXYD3,FXYD3,FXYD3	948,948,948,948,-8509,-8542,948,948,948,948
chr2:65462024-65463208	chr2	+	65462124	65463113	True	NM_001005386,NM_005722,NM_015543	chr2,chr2,chr2	+,+,-	ACTR2,ACTR2,RAB1A	-7359,-7359,-104689
chr12:4645912-4647501	chr12	+	4646003	4647391	True	NM_006479,NM_001130862,NM_020374	chr12,chr12,chr12	+,+,-	RAD51AP1,RAD51AP1,C12orf4	558,558,296
chr20:48185920-48186231	chr20	+	48185923	48186227	True	NM_015266,NM_000961	chr20,chr20	+,-	SLC9A8,PTGIS	243022,-1216
chr10:77162186-77162741	chr10	+	77162321	77162787	True	NM_032772,NR_024422,NR_024421	chr10,chr10,chr10	-,+,+	ZNF503,NCRNA00245,NCRNA00245	-808,726,-1088
chr13:111816604-111817056	chr13	+	111816631	111817091	True	NM_017664,NM_003899	chr13,chr13	-,+	ANKRD10,ARHGEF7	-249215,-10621
chr2:26987497-26989186	chr2	+	26987502	26989118	True	NM_017877,NM_001029881	chr2,chr2	+,-	C2orf18,CIB4	-411,-123291
chr12:39299737-39300316	chr12	+	39299818	39300311	True	NM_001013620,NM_153634	chr12,chr12	+,-	ALG10B,CPNE8	-589312,-398
chr22:24271703-24272381	chr22	+	24271847	24272048	True	NM_001080843,NM_002415	chr22,chr22	-,+	GSTT2B,MIF	31371,-35334
chr1:196800184-196801271	chr1	+	196800403	196801310	True	NM_002113,NM_198503	chr1,chr1	+,-	CFHR1,KCNT2	-11594,-222904
chr1:196800184-196801271	chr1	+	196715721	196717087	False	NM_001166624,NM_198503	chr1,chr1	+,-	CFHR3,KCNT2	26842,-138222
chr9:135039435-135039708	chr9	+	135039472	135039689	True	NM_032536,NM_004269	chr9,chr9	+,-	NTNG2,MED27	-2189,-84219
chrY:10038614-10039190	chrY	+	10038771	10039226	True	NR_003593,NR_003589	chrY,chrY	+,-	TTTY23B,TTTY1B	-290420,-426843
chr19:1130268-1130888	chr19	+	1130285	1130865	True	NM_001100122,NM_001039848	chr19,chr19	-,+	SBNO2,GPX4	1458,-25687
chr2:96804765-96805797	chr2	+	96804861	96805553	True	NM_004418,NM_001037228,NM_001002036	chr2,chr2,chr2	-,+,-	DUSP2,LOC285033,ASTL	5676,100423,-686
chr9:46326334-46327674	chr9	+	46326636	46327614	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2695906,359951
chr9:46326334-46327674	chr9	-	45056461	45056521	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-66276,-1425731
chr9:46326334-46327674	chr9	-	45791219	45791279	False	NM_001145196,NR_024060	chr9,chr9	-,+	FAM75A6,FAM27A	-2160489,-64241
chr9:46326334-46327674	chr9	-	46176642	46177620	False	NM_001145196,NR_024060	chr9,chr9	-,+	FAM75A6,FAM27A	-2545912,-449664
chr9:139928539-139929042	chr9	+	139928667	139929013	True	NM_004479,NM_001606,NM_212533,NM_207511	chr9,chr9,chr9,chr9	-,-,-,+	FUT7,ABCA2,ABCA2,C9orf139	-1375,-5927,-5293,-6802
chr4:175849355-175850229	chr4	+	175849392	175850254	True	NM_001130704,NM_001130705,NM_014269,NM_006529,NM_001130703	chr4,chr4,chr4,chr4,chr4	+,+,+,-,+	ADAM29,ADAM29,ADAM29,GLRA3,ADAM29	-9934,-9934,-9934,-98927,-9934
chr5:444175-445554	chr5	+	444435	445289	True	NM_007277,NM_138464	chr5,chr5	+,-	EXOC3,C5orf55	-1152,-1177
chr16:1146942-1147254	chr16	+	1146949	1147015	True	NM_207419,NM_001053	chr16,chr16	-,+	C1QTNF8,SSTR5	-705,-18219
chr8:117767633-117767977	chr8	+	117767707	117767961	True	NM_003756,NM_032334	chr8,chr8	-,+	EIF3H,UTP23	151,10780
chr7:37956392-37956686	chr7	+	37956409	37956718	True	NM_003014,NM_017549	chr7,chr7	-,+	SFRP4,EPDR1	-115,3444
chr11:73712979-73714963	chr11	+	73713556	73714822	True	NM_022803,NM_003356,NM_153614	chr11,chr11,chr11	-,-,+	UCP3,UCP3,DNAJB13	5510,5510,-52243
chr17:47074373-47074594	chr17	+	47074406	47074472	True	NM_004123,NM_006546,NM_001160423	chr17,chr17,chr17	-,+,+	GIP,IGF2BP1,IGF2BP1	-28451,301,301
chrX:135857210-135859103	chrX	+	135857287	135858719	True	NM_004840,NM_000074	chrX,chrX	-,+	ARHGEF6,CD40LG	4834,-127007
chr9:100936252-100937767	chr9	+	100936469	100937417	True	NM_018946,NM_003389	chr9,chr9	+,-	NANS,CORO2A	-117561,-1295
chr20:45032577-45033153	chr20	+	45032735	45033202	True	NM_152854,NM_133171,NM_182764	chr20,chr20,chr20	+,-,-	CD40,ELMO2,ELMO2	-285880,2119,2119
chr12:93158133-93158788	chr12	+	93158137	93158670	True	NM_001004330,NM_003566	chr12,chr12	+,-	PLEKHG7,EEA1	-27923,164488
chr17:50234671-50235277	chr17	+	50234686	50235276	True	NM_001082534,NM_020178,NM_001082533,NM_016001	chr17,chr17,chr17,chr17	-,-,-,+	CA10,CA10,CA10,UTP18	2151,906,1935,-896840
chr17:34891080-34891290	chr17	+	34891150	34891304	True	NM_001163735,NM_024835,NM_178517,NM_001033580,NM_025109	chr17,chr17,chr17,chr17,chr17	-,+,+,-,-	MYO19,GGNBP2,PIGW,MYO19,MYO19	51,9432,98,51,51
chrX:130002487-130004382	chrX	+	130002816	130004410	True	NM_144967,NM_006375	chrX,chrX	+,-	ARHGAP36,ENOX2	187805,32860
chr22:50245486-50245705	chr22	+	50245489	50245701	True	NM_014838,NM_014577	chr22,chr22	+,-	ZBED4,BRD1	1795,-27037
chr19:56988283-56988650	chr19	+	56988302	56988584	True	NR_036521,NR_036522,NM_022103,NR_030740	chr19,chr19,chr19,chr19	+,+,-,-	LOC100128252,LOC100128252,ZNF667,ZNF667	658,908,236,236
chr8:38089718-38091369	chr8	+	38089861	38090766	True	NM_001164232,NM_015214,NM_001164234,NM_001102559	chr8,chr8,chr8,chr8	+,+,+,-	DDHD2,DDHD2,DDHD2,PPAPDC1B	-441,-903,-903,36029
chr20:10654686-10654975	chr20	+	10654686	10654748	True	NM_001009608,NM_000214	chr20,chr20	+,-	C20orf94,JAG1	-238786,2
chr19:19885835-19887172	chr19	+	19886140	19887108	True	NM_021047,NR_026956	chr19,chr19	+,-	ZNF253,LOC284440	89605,164
chr1:42922611-42923480	chr1	+	42922662	42923267	True	NM_001146192,NM_032257,NM_024664,NM_001077447	chr1,chr1,chr1,chr1	-,-,+,+	ZMYND12,ZMYND12,PPCS,PPCS	-724,-724,-540,-540
chr11:628617-629123	chr11	+	628650	628822	True	NM_031264,NM_021924,NM_001171968,NM_000797,NM_021920	chr11,chr11,chr11,chr11,chr11	-,-,-,+,-	CDHR5,CDHR5,CDHR5,DRD4,SCT	-3583,-3583,-3583,8482,-1477
chr5:60631809-60632304	chr5	+	60632108	60632271	True	NM_001048249,NM_020928	chr5,chr5	-,+	C5orf43,ZSWIM6	-173806,-4074
chr8:48650374-48650582	chr8	+	48650413	48650533	True	NM_005914,NM_005195	chr8,chr8	+,-	MCM4,CEBPD	222229,243
chr17:76124946-76125245	chr17	+	76125092	76125160	True	NM_152468,NM_001127198,NM_007267	chr17,chr17,chr17	+,-,-	TMC8,TMC6,TMC6	1698,-231,3378
chr20:43727856-43728860	chr20	+	43727900	43728799	True	NM_002251,NM_002638	chr20,chr20	-,+	KCNS1,PI3	1005,74740
chr10:99447988-99448804	chr10	+	99448100	99448588	True	NM_021732,NM_031484	chr10,chr10	-,+	AVPI1,MARVELD1	-1085,24876
chr16:50731009-50731223	chr16	+	50731043	50731269	True	NM_022162,NM_182854	chr16,chr16	+,-	NOD2,SNX20	-44,-15779
chr7:100254743-100255798	chr7	+	100255036	100255847	True	NM_005273,NM_016188	chr7,chr7	+,-	GNB2,ACTL6B	15515,-952
chr5:55764178-55765941	chr5	+	55764251	55765797	True	NM_024669,NM_005921	chr5,chr5	-,+	ANKRD55,MAP3K1	-235065,345102
chr11:10770363-10772035	chr11	+	10770790	10771630	True	NM_014633,NR_004403	chr11,chr11	+,-	CTR9,SNORD97	1180,51577
chr1:12678627-12679100	chr1	+	12678632	12679010	True	NM_004753,NM_001013630	chr1,chr1	-,+	DHRS3,AADACL4	-812,25555
chr3:38206203-38206941	chr3	+	38206237	38206919	True	NM_005109,NR_024024	chr3,chr3	+,-	OXSR1,ACAA1	106,-27504
chr1:25573991-25574298	chr1	+	25573998	25574236	True	NM_001127691,NM_020317	chr1,chr1	+,-	RHD,C1orf63	24744,-13
chr5:61600393-61600735	chr5	+	61600406	61600741	True	NM_004520,NM_014473,NM_001098511	chr5,chr5,chr5	+,-,+	KIF2A,DIMT1L,KIF2A	1247,99038,1247
chrY:16098286-16098713	chrY	+	16098311	16098697	True	NM_181880,NM_004679	chrY,chrY	-,-	VCY1B,VCY	-39,-35
chrY:16098286-16098713	chrY	-	16167792	16168178	False	NM_181880,NM_004679	chrY,chrY	+,+	VCY1B,VCY	39,35
chr5:65221594-65221971	chr5	+	65221699	65221901	True	NR_028474,NM_001006600,NM_018695	chr5,chr5,chr5	-,+,+	LOC100303749,ERBB2IP,ERBB2IP	19550,482,482
chr6:134638970-134639222	chr6	+	134639023	134639217	True	NM_004865,NM_001143676	chr6,chr6	+,-	TBPL1,SGK1	-364773,29
chr8:55049144-55050673	chr8	+	55049174	55050451	True	NM_014175,NM_006330	chr8,chr8	+,-	MRPL15,LYPLA1	-1446,-34597
chr19:53970515-53970801	chr19	+	53970559	53970839	True	NR_002938,NM_001004301	chr19,chr19	-,+	LOC284379,ZNF813	135962,149
chr15:42183491-42184470	chr15	+	42183538	42184392	True	NM_016642,NM_001114633	chr15,chr15	-,+	SPTBN5,PLA2G4B	1933,-52578
chr7:100447653-100449240	chr7	+	100448226	100449052	True	NM_020246,NM_004444	chr7,chr7	+,-	SLC12A9,EPHB4	1305,-23083
chr7:133993954-133995387	chr7	+	133994090	133995292	True	NM_144648,NM_032826	chr7,chr7	+,-	LRGUK,SLC35B4	-182037,6593
chr9:72373685-72374369	chr9	+	72373870	72374406	True	NM_001099666,NM_001010940	chr9,chr9	-,+	PTAR1,C9orf135	520,61324
chr15:40632248-40633091	chr15	+	40632277	40633049	True	NM_001145643,NM_207380	chr15,chr15	+,-	PHGR1,C15orf52	10184,169
chr9:99538776-99540143	chr9	+	99539167	99540121	True	NM_014930,NR_026792	chr9,chr9	-,+	ZNF510,LOC441455	257,-51116
chr3:9290097-9290405	chr3	+	9290228	9290454	True	NM_001114092,NM_014850,NM_001033117	chr3,chr3,chr3	+,-,-	THUMPD3,SRGAP3,SRGAP3	114262,907,907
chr5:306827-307989	chr5	+	306865	307883	True	NM_020731,NM_145265	chr5,chr5	+,-	AHRR,CCDC127	-2625,-88568
chr19:20605049-20605817	chr19	+	20605148	20605702	True	NR_036455,NM_052852	chr19,chr19	-,+	ZNF826P,ZNF486	2119,-327116
chr12:56620508-56622211	chr12	+	56620812	56621705	True	NM_005785,NM_173596,NM_194359,NM_194358,NM_001135195,NM_024068	chr12,chr12,chr12,chr12,chr12,chr12	-,+,-,-,+,+	RNF41,SLC39A5,RNF41,RNF41,SLC39A5,OBFC2B	-5108,2114,-5077,-5108,2795,-2738
chr10:101944294-101945362	chr10	+	101944624	101945278	True	NM_006459,NM_005063,NM_001100626	chr10,chr10,chr10	-,+,-	ERLIN1,SCD,ERLIN1	506,161493,586
chr16:68772328-68773174	chr16	+	68772513	68772807	True	NM_004360,NM_018667	chr16,chr16	+,-	CDH1,SMPD3	-1376,-290104
chrX:49459948-49460537	chrX	+	49459955	49460579	True	NM_003785,NM_001468	chrX,chrX	-,+	PAGE1,GAGE1	67,-96390
chr10:18927903-18928143	chr10	+	18928057	18928152	True	NM_178815,NM_182543	chr10,chr10	+,-	ARL5B,NSUN6	20160,12449
chr22:41809064-41809288	chr22	+	41809063	41809129	True	NM_003216,NM_016272	chr22,chr22	+,-	TEF,TOB2	-31151,33948
chr12:21503625-21504566	chr12	+	21503952	21504371	True	NM_021094,NM_000415	chr12,chr12	-,+	SLCO1A2,IAPP	-16120,21430
chr2:25143670-25144501	chr2	+	25143707	25144259	True	NR_034113,NM_004036	chr2,chr2	+,-	LOC729723,ADCY3	50721,-1652
chr3:142369219-142370021	chr3	+	142369238	142369910	True	NM_001184,NM_001172312	chr3,chr3	-,+	ATR,PLS1	-71570,5828
chr1:29508707-29509146	chr1	+	29508718	29509057	True	NM_005626,NM_001195001	chr1,chr1	-,+	SRSF4,PTPRU	-81,53970
chr17:7465778-7466235	chr17	+	7465787	7466269	True	NM_001416,NM_172087,NM_003808,NR_037926,NM_172088,NM_006942,NM_001198624,NM_015670,NM_001204510,NM_001198623,NM_001198622	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,-,+,+,+,+,+	EIF4A1,TNFSF13,TNFSF13,SENP3-EIF4A1,TNFSF13,SOX15,TNFSF13,SENP3,EIF4A1,TNFSF13,TNFSF13	9754,-4229,-4229,-529,-4229,27269,-4229,-529,9754,-4229,-4229
chr1:15474472-15475156	chr1	+	15474510	15475187	True	NM_001136216,NM_001136217,NM_001136218,NM_018022,NR_027136	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	TMEM51,TMEM51,TMEM51,TMEM51,C1orf126	3840,3840,5041,5041,3823
chr6:144619620-144621519	chr6	+	144619638	144621557	True	NM_007124,NM_031287	chr6,chr6	+,-	UTRN,SF3B5	-6817,-202884
chr12:49176617-49177001	chr12	+	49176750	49176952	True	NM_000725,NM_020983,NM_015270	chr12,chr12,chr12	+,-,-	CACNB3,ADCY6,ADCY6	35559,5918,975
chr3:191053521-191055341	chr3	+	191053727	191055133	True	NM_178335,NM_198152,NM_174908	chr3,chr3,chr3	+,-,+	CCDC50,UTS2D,CCDC50	-6910,-5402,-6910
chrX:13704555-13704941	chrX	+	13704624	13704857	True	NM_001011658,NM_001195328,NM_004251	chrX,chrX,chrX	-,+,+	TRAPPC2,RAB9A,RAB9A	47952,2382,2382
chr20:7920553-7921057	chr20	+	7920553	7921040	True	NM_015192,NM_017545	chr20,chr20	+,-	PLCB1,HAO1	192255,114
chr5:37084845-37085120	chr5	+	37084905	37085159	True	NM_133433,NM_023073	chr5,chr5	+,-	NIPBL,C5orf42	-208102,164421
chr1:33335775-33336220	chr1	+	33335924	33335992	True	NM_001171941,NM_001171940,NM_153756,NM_002143	chr1,chr1,chr1,chr1	-,-,-,+	FNDC5,FNDC5,FNDC5,HPCA	2140,472,472,16105
chr15:37180629-37180903	chr15	+	37180689	37180951	True	NR_024264,NM_032499	chr15,chr15	-,+	LOC145845,C15orf41	-1955,-247934
chr2:51259389-51259784	chr2	+	51259399	51259739	True	NM_001135659,NM_006872,NM_004801	chr2,chr2,chr2	-,+,-	NRXN1,GTF2A1L,NRXN1	-9,-2414513,-9
chr3:16926277-16926589	chr3	+	16926309	16926377	True	NM_001144382,NM_001351	chr3,chr3	+,-	PLCL2,DAZL	74,-279303
chr17:7485628-7486148	chr17	+	7485656	7486098	True	NM_001416,NR_002918,NM_004870,NM_001040059,NR_002912,NR_024603,NR_002604,NM_001251,NM_001204510,NM_006942	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,+,+,+,+,-	EIF4A1,SNORA48,MPDU1,CD68,SNORA67,MPDU1,SNORD10,CD68,EIF4A1,SOX15	-9683,-7676,866,-2901,-4434,866,-5578,-2902,-9683,7440
chr1:111024948-111025848	chr1	+	111025053	111025661	True	NM_005549,NR_003599	chr1,chr1	-,+	KCNA10,CYMP	36186,-1720
chr2:239112782-239113255	chr2	+	239112950	239113236	True	NM_030768,NR_026923	chr2,chr2	-,+	ILKAP,LOC643387	-626,27090
chr19:45541027-45541241	chr19	+	45541144	45541286	True	NM_145288,NM_007056	chr19,chr19	-,+	ZNF296,CLASRP	38452,1011
chr12:56843218-56845177	chr12	+	56843277	56845068	True	NM_003920,NM_012064,NM_207344	chr12,chr12,chr12	-,-,+	TIMELESS,MIP,SPRYD4	-77,3417,17232
chr16:28855495-28855791	chr16	+	28855530	28855738	True	NM_003321,NM_001145795	chr16,chr16	-,+	TUFM,SH2B1	2041,19339
chr9:139332949-139333157	chr9	+	139332949	139333147	True	NM_019892,NM_015160	chr9,chr9	-,+	INPP5E,PMPCA	1159,-27884
chr1:77333604-77333901	chr1	+	77333728	77333794	True	NM_005482,NM_030965	chr1,chr1	-,+	PIGK,ST6GALNAC5	351388,-598
chr19:2052097-2052323	chr19	+	2052131	2052289	True	NM_001031735,NM_017572,NM_199054	chr19,chr19,chr19	+,-,-	IZUMO4,MKNK2,MKNK2	44578,-888,-888
chrX:43510647-43512137	chrX	+	43510751	43512173	True	NM_000898,NM_000240	chrX,chrX	-,+	MAOB,MAOA	229598,3235
chr11:46637727-46638056	chr11	+	46637741	46638087	True	NR_024589,NR_024588,NM_001205119,NR_024587,NM_014741,NM_173811,NM_001205121,NM_001205120,NM_001205122,NM_001142673	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,-,+,+,+,+	ATG13,ATG13,ATG13,ATG13,ATG13,HARBI1,ATG13,ATG13,ATG13,ATG13	738,738,738,738,738,740,738,738,738,738
chr9:101018399-101018729	chr9	+	101018439	101018629	True	NM_018946,NM_018421	chr9,chr9	+,-	NANS,TBC1D2	-199531,-436
chr1:249118043-249119393	chr1	+	249118235	249119319	True	NR_036070,NM_030645	chr1,chr1	+,-	MIR3124,SH3BP5L	1256,885
chr8:72599400-72600617	chr8	+	72599645	72600635	True	NM_005098,NR_033652	chr8,chr8	-,+	MSC,LOC100132891	156146,154722
chr14:65377543-65378676	chr14	+	65377638	65378455	True	NM_001202559,NM_001202558,NM_002083,NM_001204063,NM_001204064,NM_145165	chr14,chr14,chr14,chr14,chr14,chr14	+,+,-,+,+,+	CHURC1-FNTB,CHURC1-FNTB,GPX2,CHURC1,CHURC1,CHURC1	2623,2623,31137,2623,2623,2623
chr1:59606931-59608123	chr1	+	59607178	59608034	True	NR_027120,NM_001113411	chr1,chr1	-,+	LOC729467,FGGY	4495,154590
chr11:128462368-128463222	chr11	+	128462504	128463226	True	NM_001167681,NM_001143820	chr11,chr11	+,-	FLI1,ETS1	100584,-5051
chr17:27054454-27054977	chr17	+	27054473	27055023	True	NM_001144942,NR_024575,NR_024579,NM_001144943,NM_000984,NR_000014,NM_178170,NM_031934,NR_000010,NR_000013,NM_138463,NM_001142625,NM_001160407,NM_001142624,NR_000009	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,+,+,+,-,+,+,-,-,-,-,+	RAB34,RAB34,RAB34,RAB34,RPL23A,SNORD42A,NEK8,RAB34,SNORD4A,SNORD42B,TLCD1,RAB34,TLCD1,RAB34,SNORD4B	-9565,-9222,-9222,-9187,-7524,-4077,808,-9565,-4924,-6956,-1243,-9187,-524,-9187,-3825
chr4:49179134-49180220	chr4	+	49179290	49180268	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-191076,-270475
chr9:34727578-34728062	chr9	+	34727596	34728046	True	NM_004512,NM_001141917	chr9,chr9	+,-	IL11RA,C9orf144B	-73717,1541
chr3:193311379-193312298	chr3	+	193311411	193312050	True	NM_032279,NM_015560,NM_130832,NM_130833,NM_130831,NM_130836,NM_130837,NM_130834,NM_130835	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,+,+,+,+,+,+,+	ATP13A4,OPA1,OPA1,OPA1,OPA1,OPA1,OPA1,OPA1,OPA1	-38715,-529,-529,-529,-529,-529,-529,-529,-529
chr1:156271779-156272468	chr1	+	156271780	156272259	True	NM_144580,NM_032323,NM_001004319	chr1,chr1,chr1	-,+,-	C1orf85,TMEM79,VHLL	-6331,-17761,-2352
chr7:23155405-23156797	chr7	+	23155487	23156509	True	NM_018846,NM_032581	chr7,chr7	+,-	KLHL7,FAM126A	-9625,-101717
chr9:35793055-35793598	chr9	+	35793148	35793565	True	NM_003995,NM_172312	chr9,chr9	+,-	NPR2,SPAG8	-793,18745
chr13:113953377-113955055	chr13	+	113953501	113954504	True	NM_024719,NM_005561	chr13,chr13	-,+	GRTP1,LAMP1	64011,-2094
chr2:68051037-68051926	chr2	+	68051067	68051925	True	NM_001190263,NM_020143	chr2,chr2	-,+	C1D,PNO1	238292,333079
chr8:104161821-104163070	chr8	+	104161903	104163109	True	NR_036106,NM_024812,NR_027071,NM_001024372	chr8,chr8,chr8,chr8	+,+,-,+	MIR3151,BAALC,C8orf56,BAALC	3732,-9033,-8333,-9033
chr5:140503912-140505611	chr5	+	140503968	140505273	True	NM_015669,NM_031947,NM_018938	chr5,chr5,chr5	+,-,+	PCDHB5,SLC25A2,PCDHB4	9526,178398,-2443
chr11:12693718-12694511	chr11	+	12693773	12694255	True	NM_021961,NM_013253	chr11,chr11	+,-	TEAD1,DKK3	1713,-662856
chrX:103217958-103218904	chrX	+	103217973	103218591	True	NM_194324,NM_001002916	chrX,chrX	+,-	TMSB15B,H2BFWT	-831,49722
chr5:139724910-139725267	chr5	+	139725061	139725239	True	NM_001945,NM_031467	chr5,chr5	-,+	HBEGF,SLC4A9	999,14547
chr16:80836872-80837387	chr16	+	80836878	80837220	True	NM_152342,NM_018455	chr16,chr16	-,+	CDYL2,CENPN	1005,202882
chr8:142237186-142237698	chr8	+	142237247	142237669	True	NM_014957,NM_001080431	chr8,chr8	+,-	DENND3,SLC45A4	-98578,1054
chr4:142043885-142044628	chr4	+	142044050	142044591	True	NM_020724,NM_014487	chr4,chr4	-,+	RNF150,ZNF330	10084,97457
chr13:114896752-114897003	chr13	+	114896822	114896988	True	NM_001078645	chr13	+	CDC16	103373
chr3:107926744-107928686	chr3	+	107926924	107928503	True	NM_018010,NM_007072	chr3,chr3	-,+	IFT57,HHLA2	12964,92828
chr22:17604143-17604532	chr22	+	17604237	17604545	True	NM_031890,NM_001163079,NR_024482	chr22,chr22,chr22	-,-,+	CECR6,CECR6,CECR4	-2024,-1980,35733
chrX:11687289-11688151	chrX	+	11687454	11687901	True	NM_078628,NM_013427,NM_006125	chrX,chrX,chrX	+,-,-	MSL3,ARHGAP6,ARHGAP6	88376,-3633,-3633
chr2:84783395-84784490	chr2	+	84783400	84784424	True	NM_003849,NM_001370	chr2,chr2	-,+	SUCLG1,DNAH6	-96814,-39872
chr22:46929866-46930193	chr22	+	46929948	46930224	True	NM_015124,NM_014246	chr22,chr22	+,-	GRAMD4,CELSR1	92433,2893
chr1:40952888-40953398	chr1	+	40953152	40953414	True	NM_001852,NM_198494	chr1,chr1	-,+	COL9A2,ZNF642	-170213,-9913
chr15:43939505-43940595	chr15	+	43939575	43940511	True	NM_054020,NM_172097,NM_172095,NM_001015001	chr15,chr15,chr15,chr15	-,-,-,+	CATSPER2,CATSPER2,CATSPER2,CKMT1A	578,578,578,44572
chrX:70932393-70933300	chrX	+	70932514	70933245	True	NR_034005,NM_001145140,NM_001145139	chrX,chrX,chrX	+,-,-	FLJ46446,CXorf49,CXorf49B	-15519,4940,4940
chrX:70932393-70933300	chrX	-	70988029	70988760	False	NR_001568,NM_001145140,NM_001145139	chrX,chrX,chrX	-,+,+	BCYRN1,CXorf49,CXorf49B	-39067,-4940,-4940
chr1:161084943-161086574	chr1	+	161085182	161086431	True	NM_001185094,NM_012394,NM_001185092,NM_005600,NM_001185093	chr1,chr1,chr1,chr1,chr1	+,-,+,+,+	NIT1,PFDN2,NIT1,NIT1,NIT1	1476,1499,1430,1430,1475
chr1:2484776-2485074	chr1	+	2484953	2485123	True	NR_037844,NR_026927,NM_003820	chr1,chr1,chr1	-,-,+	LOC100133445,LOC115110,TNFRSF14	3377,-669,2681
chr1:2484776-2485074	chr1	-	2499434	2499604	False	NR_037844,NM_003820	chr1,chr1	-,+	LOC100133445,TNFRSF14	-10984,-11680
chr9:136444433-136444858	chr9	+	136444512	136444804	True	NM_014694,NM_001080515	chr9,chr9	+,-	ADAMTSL2,FAM163B	-44588,614
chrX:147583992-147584370	chrX	+	147583991	147584269	True	NM_002025,NR_024503,NM_001169124,NM_001169125,NM_001169122,NM_001169123	chrX,chrX,chrX,chrX,chrX,chrX	+,-,+,+,+,+	AFF2,FMR1-AS1,AFF2,AFF2,AFF2,AFF2	-1912,-580315,-1912,-1912,-1912,-1912
chr1:161388400-161388931	chr1	+	161388451	161388956	True	NM_001136219,NM_001013625	chr1,chr1	+,-	FCGR2A,C1orf192	86248,-50787
chr10:96827073-96828672	chr10	+	96827171	96828531	True	NM_000770,NM_001198855,NM_207321,NM_001198854,NM_001198853	chr10,chr10,chr10,chr10,chr10	-,-,+,-,-	CYP2C8,CYP2C8,C10orf129,CYP2C8,CYP2C8	787,787,125425,787,787
chr8:86963414-86964578	chr8	+	86963805	86964425	True	NM_152565,NM_033126	chr8,chr8	+,-	ATP6V0D2,PSKH2	146713,117485
chr2:74006200-74007062	chr2	+	74006340	74006924	True	NM_001080474,NM_003584	chr2,chr2	+,-	C2orf78,DUSP11	4391,410
chr5:43557587-43558079	chr5	+	43557697	43557773	True	NM_182789,NM_006451,NM_012343,NM_183323	chr5,chr5,chr5,chr5	-,-,+,-	PAIP1,PAIP1,NNT,PAIP1	-502,-502,45017,-176
chr2:233270112-233270948	chr2	+	233270203	233270949	True	NM_031313,NR_028501	chr2,chr2	+,-	ALPPL2,ECEL1P2	602,-18449
chr20:32248733-32250211	chr20	+	32248919	32250197	True	NM_080825,NM_031231,NM_001024675	chr20,chr20,chr20	+,-,+	C20orf144,NECAB3,C20orf134	-106,12117,4106
chr2:109604171-109604588	chr2	+	109604206	109604618	True	NM_022336,NM_001099289	chr2,chr2	-,+	EDAR,SH3RF3	1260,141378
chr15:59402115-59403499	chr15	+	59402430	59403291	True	NM_004701,NR_031750	chr15,chr15	+,-	CCNB2,MIR2116	-5172,60227
chr10:48184462-48184719	chr10	+	48184510	48184764	True	NM_002900,NR_024495	chr10,chr10	-,+	RBP3,LOC642826	206277,1091
chr10:48184462-48184719	chr10	-	48953564	48953818	False	NR_026566,NM_153034,NR_003611	chr10,chr10,chr10	-,+,-	BMS1P1,ZNF488,BMS1P5	-935,-598526,-935
chr10:48184462-48184719	chr10	-	46763827	46764081	False	NR_027632,NR_026566,NR_003611	chr10,chr10,chr10	+,-,-	FAM35B,BMS1P1,BMS1P5	133559,-935,-935
chr10:48184462-48184719	chr10	-	47244592	47244846	False	NR_027634,NR_024495	chr10,chr10	+,-	FAM35B2,LOC642826	134873,-1098
chr22:19109766-19110171	chr22	+	19109891	19110165	True	NM_053006,NM_005137,NM_001173533,NM_001184781,NM_001173534,NR_033674	chr22,chr22,chr22,chr22,chr22,chr22	+,-,-,-,-,-	TSSK2,DGCR2,DGCR2,DGCR2,DGCR2,DGCR2	8155,-56,-56,-56,-56,-56
chr3:193096524-193097748	chr3	+	193096587	193097791	True	NR_026877,NM_198505	chr3,chr3	+,-	MGC2889,ATP13A5	-137072,-73
chr3:49059806-49060193	chr3	+	49059843	49060177	True	NM_001009996,NM_199074,NM_199073,NR_029948,NM_199070,NM_000884,NR_029690,NM_018114,NM_199069	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,+,-,+,-,-,-,+	DALRD3,NDUFAF3,NDUFAF3,MIR425,NDUFAF3,IMPDH2,MIR191,DALRD3,NDUFAF3	-3826,-1986,-1276,-2176,-820,6748,-1701,-1376,-820
chr8:114449117-114449780	chr8	+	114449302	114449814	True	NR_031745,NM_052900,NM_198123	chr8,chr8,chr8	+,-,-	MIR2053,CSMD3,CSMD3	-793631,-60,-60
chr20:32031853-32033472	chr20	+	32031948	32033301	True	NM_003098,NM_001032999	chr20,chr20	-,+	SNTA1,CBFA2T2	-250,44626
chr11:72464592-72465675	chr11	+	72464820	72465712	True	NM_001040118,NM_033388	chr11,chr11	-,+	ARAP1,ATG16L2	-1386,59738
chr19:45910306-45910524	chr19	+	45910411	45910537	True	NM_001142502,NM_012099,NM_006663	chr19,chr19,chr19	-,+,-	PPP1R13L,CD3EAP,PPP1R13L	-804,-995,-2099
chr11:57479037-57479321	chr11	+	57479146	57479354	True	NM_153450,NM_015959,NM_001144012,NR_037646,NR_037645,NR_026593	chr11,chr11,chr11,chr11,chr11,chr11	-,+,+,+,+,+	MED19,TMX2,TMX2,TMX2-CTNND1,TMX2,TMX2	369,640,640,640,640,640
chr1:203152882-203154463	chr1	+	203152914	203154358	True	NM_001276,NM_004997,NM_001048230	chr1,chr1,chr1	-,-,+	CHI3L1,MYBPH,ADORA1	1614,-7972,-56130
chr3:120400573-120401056	chr3	+	120400668	120401074	True	NM_000187,NM_005513	chr3,chr3	-,+	HGD,GTF2E1	394,60483
chr21:32997338-32998668	chr21	+	32997429	32998372	True	NM_000454,NM_003253	chr21,chr21	+,-	SOD1,TIAM1	33562,-66139
chr1:204181225-204182733	chr1	+	204181227	204182747	True	NM_005686,NM_198447	chr1,chr1	+,-	SOX13,GOLT1A	-139032,523
chr14:45718453-45718928	chr14	+	45718657	45718803	True	NM_018353,NM_020937	chr14,chr14	-,+	MIS18BP1,FANCM	3862,-113572
chr13:52702458-52702772	chr13	+	52702516	52702810	True	NM_199289,NM_021645	chr13,chr13	-,+	NEK5,UTP14C	454,-103741
chr17:14142083-14142518	chr17	+	14142102	14142548	True	NM_001007530,NM_006041	chr17,chr17	-,+	CDRT15,HS3ST3B1	-1952,61957
chr17:14142083-14142518	chr17	-	13925426	13925872	False	NR_003261,NM_001007530	chr17,chr17	+,-	CDRT15P,CDRT15	1942,214335
chr9:136397223-136397689	chr9	+	136397233	136397677	True	NM_014694,NM_001080483,NM_001145320	chr9,chr9,chr9	+,-,+	ADAMTSL2,TMEM8C,ADAMTSL2	2297,-7165,0
chr17:8200192-8201421	chr17	+	8200419	8201001	True	NM_016492,NM_001177802,NM_201520,NM_001177801	chr17,chr17,chr17,chr17	+,+,-,+	RANGRF,RANGRF,SLC25A35,RANGRF	-8501,-8501,-2249,-8501
chr1:2518575-2518813	chr1	+	2518580	2518862	True	NR_036637,NM_001195741,NM_001195740,NR_037844,NR_036638,NM_001195738,NM_152371,NM_001195736,NM_001195737	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,-,+,+,+,+,+	C1orf93,C1orf93,C1orf93,LOC100133445,C1orf93,C1orf93,C1orf93,C1orf93,C1orf93	-732,-442,-442,-30130,-732,-442,-442,-442,-442
chr3:58221329-58222072	chr3	+	58221391	58222015	True	NM_020676,NM_004944	chr3,chr3	+,-	ABHD6,DNASE1L3	1243,-20993
chr16:29373070-29373573	chr16	+	29373113	29373379	True	NR_002939,NM_001031827	chr16,chr16	+,-	RUNDC2C,BOLA2	-70623,92956
chr16:29373070-29373573	chr16	+	12142774	12143040	False	NM_001080530,NM_001130007	chr16,chr16	+,-	SNX29,GSPT1	3014,-132255
chr16:29373070-29373573	chr16	+	21393993	21394259	False	NR_026675,NM_130464	chr16,chr16	+,-	NCRNA00169,NPIPL3	-81874,42449
chr22:39004891-39006071	chr22	+	39005223	39005703	True	NM_001002880,NM_007068	chr22,chr22	+,-	CBY1,DMC1	46954,-39034
chr14:35510207-35511501	chr14	+	35510419	35511070	True	NM_001079519,NM_017917,NM_173607	chr14,chr14,chr14	+,-,+	FAM177A1,PPP2R3C,FAM177A1	3042,80512,4539
chr14:32421563-32421904	chr14	+	32421610	32421778	True	NR_027263,NM_001030055	chr14,chr14	-,+	C14orf128,ARHGAP5	124177,124716
chr10:1095304-1095507	chr10	+	1095308	1095517	True	NM_004508,NM_014023	chr10,chr10	-,+	IDI1,WDR37	-247,7258
chr9:35619372-35620548	chr9	+	35619803	35620532	True	NM_001782,NM_006285	chr9,chr9	-,+	CD72,TESK1	-1379,-14573
chr3:49317618-49318811	chr3	+	49318033	49318469	True	NM_198562,NR_036233	chr3,chr3	-,+	C3orf62,MIR4271	-3525,-6531
chr19:8429489-8429813	chr19	+	8429494	8429750	True	NM_139314,NM_001039667,NM_198471	chr19,chr19,chr19	+,+,-	ANGPTL4,ANGPTL4,KANK3	-534,-534,-21348
chr10:47383603-47384647	chr10	+	47383716	47384408	True	NR_024495,NR_027634	chr10,chr10	-,+	LOC642826,FAM35B2	-140222,-4048
chr10:47383603-47384647	chr10	+	88915369	88915419	False	NM_019054,NM_005271	chr10,chr10	+,-	FAM35A,GLUD1	-60467,-60593
chr10:47383603-47384647	chr10	+	49091390	49091843	False	NM_001137548,NM_002750	chr10,chr10	-,+	FAM25C,MAPK8	116042,517843
chr10:47383603-47384647	chr10	+	46901640	46902094	False	NR_027632,NM_181519	chr10,chr10	+,-	FAM35B,SYT15	-4051,68567
chr17:21194809-21195178	chr17	+	21194829	21195211	True	NM_152914,NM_145109,NM_002756	chr17,chr17,chr17	-,+,+	C17orf103,MAP2K3,MAP2K3	-38251,-6912,-3532
chr9:26889135-26889572	chr9	+	26889440	26889581	True	NM_024828,NM_001099223,NM_001167575	chr9,chr9,chr9	-,+,-	C9orf82,IFT74,C9orf82	3296,57455,3296
chr16:58718641-58718907	chr16	+	58718707	58718945	True	NM_018231,NM_024860	chr16,chr16	-,+	SLC38A7,SETD6	-33,-169375
chr3:71836678-71838601	chr3	+	71836781	71838398	True	NM_018971,NM_001126128,NM_021935	chr3,chr3,chr3	+,-,-	GPR27,PROK2,PROK2	-33631,-2424,-2424
chr7:3084127-3085659	chr7	+	3084517	3085415	True	NM_032415,NM_152744	chr7,chr7	-,+	CARD11,SDK1	-1008,255664
chr5:172263037-172263718	chr5	+	172263072	172263658	True	NM_004417,NM_001031711	chr5,chr5	-,+	DUSP1,ERGIC1	-64869,-1900
chr2:109403479-109404550	chr2	+	109403689	109404361	True	NM_144978,NM_022336	chr2,chr2	+,-	CCDC138,EDAR	-527,201526
chr20:34285141-34285656	chr20	+	34285313	34285693	True	NM_080748,NM_001198989,NM_021100,NR_037570	chr20,chr20,chr20,chr20	+,-,-,-	ROMO1,NFS1,NFS1,NFS1	1538,1644,1644,1644
chr7:102284261-102284896	chr7	+	102284285	102284904	True	NM_001114403,NM_001166339,NM_001031618	chr7,chr7,chr7	-,+,+	UPK3BL,SPDYE2L,SPDYE2	-1047,5867,5867
chr7:102284261-102284896	chr7	+	44031288	44031514	False	NM_175064,NR_003655	chr7,chr7	+,-	SPDYE1,POLR2J4	8974,27284
chr7:102284261-102284896	chr7	+	102185192	102185813	False	NM_001031618,NM_001166339,NM_001097615	chr7,chr7,chr7	+,+,-	SPDYE2,SPDYE2L,POLR2J3	5865,5865,27305
chr1:206812897-206813370	chr1	+	206813101	206813269	True	NM_003582,NM_001004023,NM_006893	chr1,chr1,chr1	+,+,-	DYRK3,DYRK3,EIF2D	-4278,-4278,-27197
chr1:224032759-224033001	chr1	+	224032796	224032975	True	NM_001031685,NM_005426,NM_001748	chr1,chr1,chr1	-,-,+	TP53BP2,TP53BP2,CAPN2	751,751,-132728
chr17:40728795-40729460	chr17	+	40728810	40729274	True	NM_016556,NM_170607,NM_198204,NM_198205,NM_013290	chr17,chr17,chr17,chr17,chr17	-,+,+,+,-	PSMC3IP,MLX,MLX,MLX,PSMC3IP	523,-9790,-9790,-9790,523
chr15:91449159-91449910	chr15	+	91449179	91449865	True	NM_006122,NM_198527	chr15,chr15	+,-	MAN2A2,HDDC3	-1810,25959
chr12:92536501-92538418	chr12	+	92536636	92538453	True	NR_027932,NM_001731	chr12,chr12	+,-	CLLU1,BTG1	276853,1270
chr7:108160625-108162459	chr7	+	108160663	108162235	True	NM_015723,NM_012328	chr7,chr7	-,+	PNPLA8,DNAJB9	4455,47953
chrX:16734881-16735683	chrX	+	16735184	16735693	True	NM_032796,NM_019857,NM_175859,NR_033181,NM_001144002	chrX,chrX,chrX,chrX,chrX	+,-,-,+,-	SYAP1,CTPS2,CTPS2,SYAP1,CTPS2	2013,-4125,-4409,2013,-4844
chr10:126490892-126492392	chr10	+	126490927	126491848	True	NM_032182,NM_212554	chr10,chr10	+,-	FAM175B,METTL10	-624,-10488
chr17:37821662-37822303	chr17	+	37821671	37822341	True	NM_002686,NM_003673,NM_033419	chr17,chr17,chr17	+,+,-	PNMT,TCAP,PGAP3	2165,-123,22019
chr6:166793325-166794146	chr6	+	166793326	166794064	True	NM_016098,NR_027284	chr6,chr6	-,+	BRP44L,LOC441177	2480,-392338
chr21:44532509-44534397	chr21	+	44532979	44534097	True	NM_006758,NM_001025203,NM_001025204,NM_000394	chr21,chr21,chr21,chr21	-,-,-,+	U2AF1,U2AF1,U2AF1,CRYAA	-5291,-5291,-5291,55043
chr19:17631462-17631810	chr19	+	17631562	17631778	True	NM_012088,NM_001098524,NM_173544,NM_138454	chr19,chr19,chr19,chr19	+,+,+,-	PGLS,FAM129C,FAM129C,NXNL1	-9181,2331,2331,-59837
chr6:71123884-71124400	chr6	+	71123893	71124449	True	NM_020819,NM_001851,NM_001105531	chr6,chr6,chr6	+,-,+	FAM135A,COL9A1,FAM135A	-837,-111107,-837
chr22:19841051-19841446	chr22	+	19841055	19841439	True	NM_024627,NM_000754,NM_053004	chr22,chr22,chr22	-,+,-	C22orf29,COMT,GNB1L	982,87823,1073
chr3:68056657-68057015	chr3	+	68056675	68057016	True	NM_213609,NM_003848	chr3,chr3	+,-	FAM19A1,SUCLG2	-3272,-351637
chr15:100106846-100107111	chr15	+	100106930	100107155	True	NM_001171894,NM_001130926,NM_001130927,NM_005587,NM_152449	chr15,chr15,chr15,chr15,chr15	+,+,+,+,-	MEF2A,MEF2A,MEF2A,MEF2A,LYSMD4	-848,-848,-848,-848,166522
chr19:12996919-12997890	chr19	+	12997005	12997788	True	NM_006563,NM_001375,NM_000159,NM_013976	chr19,chr19,chr19,chr19	-,-,+,+	KLF1,DNASE2,GCDH,GCDH	279,-4670,4185,4185
chr4:91043670-91044615	chr4	+	91043691	91044659	True	NM_001145065,NM_001146055	chr4,chr4	+,-	FAM190A,SNCA	4024,-284244
chr8:119125431-119126044	chr8	+	119125465	119125833	True	NM_080651,NM_000127	chr8,chr8	+,-	MED30,EXT1	-592551,-1407
chr18:48344826-48345929	chr18	+	48344835	48345882	True	NM_001168335,NM_031939,NM_001127176,NM_001127175,NM_001127174	chr18,chr18,chr18,chr18,chr18	+,-,-,-,-	ME2,MRO,MRO,MRO,MRO	59549,602,602,602,5922
chr12:570441-570710	chr12	+	570443	570635	True	NM_001042603,NM_173593	chr12,chr12	-,+	KDM5A,B4GALNT3	-71823,-956
chr19:55367105-55368002	chr19	+	55367137	55367941	True	NM_006737,NM_001127255	chr19,chr19	+,-	KIR3DL2,NLRP7	-5290,90982
chr11:47597809-47598318	chr11	+	47598016	47598215	True	NM_018095,NR_024222,NM_004551,NM_016506	chr11,chr11,chr11,chr11	-,-,+,-	KBTBD4,KBTBD4,NDUFS3,KBTBD4	2409,2409,2346,2363
chr12:123186152-123186781	chr12	+	123186163	123186765	True	NM_003677,NM_177551	chr12,chr12	+,-	DENR,GPR109A	50605,1189
chr10:118501183-118501425	chr10	+	118501220	118501284	True	NM_025015,NM_005396	chr10,chr10	-,+	HSPA12A,PNLIPRP2	851,-120806
chr6:2752323-2752914	chr6	+	2752330	2752918	True	NM_001012418,NM_020135	chr6,chr6	-,+	MYLK4,WRNIP1	-1176,12747
chr10:50319439-50320471	chr10	+	50319591	50320411	True	NM_144984,NM_001135196,NM_001031746	chr10,chr10,chr10	-,+,-	C10orf72,C10orf71,C10orf72	3198,186775,3198
chr2:38978851-38980101	chr2	+	38978862	38979695	True	NM_001031684,NM_001195446,NM_024775	chr2,chr2,chr2	-,-,+	SRSF7,SRSF7,GEMIN6	-226,-226,25631
chr17:16120031-16120416	chr17	+	16120178	16120428	True	NM_004278,NM_006311	chr17,chr17	+,-	PIGL,NCOR1	80,-1304
chr1:160830755-160831549	chr1	+	160830920	160831300	True	NM_002348,NM_001166663,NM_001166664,NM_016382	chr1,chr1,chr1,chr1	+,-,-,-	LY9,CD244,CD244,CD244	-65043,1442,1442,1442
chr13:41634644-41634881	chr13	+	41634659	41634906	True	NM_172373,NM_007187	chr13,chr13	-,+	ELF1,WBP4	-41151,790
chr9:133527498-133528734	chr9	+	133527497	133528489	True	NR_027440,NM_021619	chr9,chr9	-,+	LOC100272217,PRDM12	-72616,11491
chr15:74466792-74467343	chr15	+	74466866	74467342	True	NM_001199042,NM_201526,NM_005545	chr15,chr15,chr15	-,+,+	STRA6,ISLR,ISLR	27928,-12,-830
chr6:24881394-24882887	chr6	+	24881473	24882691	True	NM_015864,NM_015895	chr6,chr6	-,+	FAM65B,GMNN	-3890,-106367
chr3:49896869-49897210	chr3	+	49896891	49896997	True	NM_005879,NM_203370	chr3,chr3	-,+	TRAIP,C3orf54	-2899,-56255
chr16:66612006-66612480	chr16	+	66612172	66612524	True	NM_144673,NM_001199317,NM_004614	chr16,chr16,chr16	+,+,-	CMTM2,CMTM2,TK2	826,826,-27857
chr3:10148535-10149062	chr3	+	10148603	10148919	True	NM_173472,NM_018462,NM_001164839	chr3,chr3,chr3	-,+,-	C3orf24,C3orf10,C3orf24	1046,8413,1046
chr1:31770218-31770451	chr1	+	31770227	31770487	True	NM_004814,NM_016505	chr1,chr1	-,+	SNRNP40,ZCCHC17	-583,-436
chr4:40750710-40751391	chr4	+	40750828	40751197	True	NM_001166051,NM_024677	chr4,chr4	-,+	APBB2,NSUN7	108030,716
chr19:13876724-13877951	chr19	+	13876765	13877723	True	NR_036515,NM_014047,NM_001031727,NM_032285	chr19,chr19,chr19,chr19	-,+,+,+	LOC284454,C19orf53,MRI1,MRI1	69433,7533,-1479,-1479
chr1:206729457-206729884	chr1	+	206729492	206729868	True	NM_182665,NM_001201478	chr1,chr1	+,-	RASSF5,EIF2D	623,56086
chr1:202611836-202612087	chr1	+	202611869	202612095	True	NM_001136504,NM_001197131	chr1,chr1	-,+	SYT2,PPP1R12B	536,-102678
chr2:74403325-74403611	chr2	+	74403519	74403621	True	NM_018221,NM_006636	chr2,chr2	-,+	MOBKL1B,MTHFD2	2424,22068
chr11:66407211-66407488	chr11	+	66407282	66407522	True	NM_002896,NM_001198844,NM_031492,NM_001198843	chr11,chr11,chr11,chr11	+,+,-,+	RBM4,RBM4,RBM4B,RBM4	-1245,-1245,37803,-1245
chr11:66407211-66407488	chr11	-	66444210	66444450	False	NM_001198844,NM_031492	chr11,chr11	+,-	RBM4,RBM4B	-38173,875
chr3:178789120-178789325	chr3	+	178789207	178789299	True	NM_152240,NM_022470,NM_006218	chr3,chr3,chr3	-,-,+	ZMAT3,ZMAT3,PIK3CA	407,407,77011
chr2:45170210-45170566	chr2	+	45170250	45170502	True	NM_005413,NM_016932	chr2,chr2	+,-	SIX3,SIX2	-1264,66090
chrX:51636430-51637525	chrX	+	51636571	51637559	True	NM_001005333,NR_003711,NM_006986	chrX,chrX,chrX	+,-,+	MAGED1,SNORA11D,MAGED1	0,169060,0
chrX:119713284-119714737	chrX	+	119713635	119714679	True	NM_014060,NM_003588	chrX,chrX	+,-	MCTS1,CUL4B	23064,-3951
chr5:76252520-76253502	chr5	+	76252629	76253159	True	NR_003014,NM_001882	chr5,chr5	-,+	SNORA47,CRHBP	123300,-4013
chr22:18562330-18563186	chr22	+	18562398	18563078	True	NM_001127649,NM_017929,NM_001199319,NM_001136004	chr22,chr22,chr22,chr22	+,+,+,-	PEX26,PEX26,PEX26,MICAL3	-1690,-1764,-1764,-55073
chr12:124455128-124456499	chr12	+	124455160	124456478	True	NM_152437,NM_025140,NM_001204298,NM_001204299	chr12,chr12,chr12,chr12	+,-,+,+	ZNF664,CCDC92,ZNF664,ZNF664-FAM101A	1283,735,1283,1283
chr3:121467758-121468206	chr3	+	121467763	121468129	True	NM_004487,NM_018456	chr3,chr3	-,+	GOLGB1,EAF2	523,85904
chr21:35288073-35289206	chr21	+	35288285	35289159	True	NM_032476,NM_001697	chr21,chr21	+,-	MRPS6,ATP5O	156663,-127
chr18:44706507-44708404	chr18	+	44706787	44708371	True	NM_016097,NM_031303	chr18,chr18	-,+	IER3IP1,KATNAL2	-4042,-180058
chr8:104318889-104320558	chr8	+	104319169	104320596	True	NM_001164616,NM_001164615,NM_003506,NM_030780	chr8,chr8,chr8,chr8	+,+,+,-	FZD6,FZD6,FZD6,SLC25A32	-8161,-8559,-8161,106922
chr4:39634022-39634836	chr4	+	39634453	39634645	True	NM_174921,NM_001111112	chr4,chr4	-,+	C4orf34,UBE2K	5897,65018
chr8:38645392-38645632	chr8	+	38645453	38645609	True	NM_006283,NR_003129,NM_001122824	chr8,chr8,chr8	+,-,+	TACC1,RNF5P1,TACC1	-782,-186678,-782
chr6:14976751-14977183	chr6	+	14976980	14977071	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	269455,686281
chr18:13726954-13727216	chr18	+	13727024	13727238	True	NM_003799,NM_152352,NM_001098801	chr18,chr18,chr18	+,-,-	RNMT,C18orf19,C18orf19	-371,-433,-433
chr10:135194042-135194336	chr10	+	135194048	135194215	True	NM_207127,NR_037509,NM_004092,NM_152911,NM_207128	chr10,chr10,chr10,chr10,chr10	+,-,-,+,+	PAOX,MIR3944,ECHS1,PAOX,PAOX	-1358,-8881,-7140,-1358,-1358
chr13:37396510-37397045	chr13	+	37396610	37397094	True	NM_001127217,NM_000538	chr13,chr13	-,+	SMAD9,RFXAP	97366,-3323
chr2:158846960-158848801	chr2	+	158846999	158848759	True	NM_001111067,NM_001135098	chr2,chr2	-,+	ACVR1,UPP2	-114625,2931
chr2:95538241-95538704	chr2	+	95538349	95538749	True	NR_003366,NM_144705	chr2,chr2	-,+	ANKRD20A8P,TEKT4	-15529,-1168
chr1:39400250-39401375	chr1	+	39400778	39401213	True	NM_001136275,NM_017821	chr1,chr1	+,-	AKIRIN1,RHBDL2	55702,6302
chrX:153096680-153096918	chrX	+	153096709	153096807	True	NM_032512,NM_006280	chrX,chrX	-,+	PDZD4,SSR4	-706,-36741
chr3:165508122-165509005	chr3	+	165508181	165508789	True	NM_000055,NM_001122752	chr3,chr3	-,+	BCHE,SERPINI1	46514,1944642
chrX:46690746-46691906	chrX	+	46691161	46691751	True	NM_032591,NM_006915	chrX,chrX	-,+	SLC9A7,RP2	-72689,4595
chr14:77822156-77823298	chr14	+	77822170	77823354	True	NM_001010860,NM_213601	chr14,chr14	+,-	SAMD15,TMED8	20407,20102
chr16:89005802-89006009	chr16	+	89005909	89006045	True	NM_175931,NM_016209	chr16,chr16	-,+	CBFA2T3,TRAPPC2L	1613,-82454
chr1:3713197-3713509	chr1	+	3713313	3713529	True	NM_020710,NM_001163724	chr1,chr1	-,+	LRRC47,LOC388588	-245,-24012
chr6:39282984-39283985	chr6	+	39282988	39283851	True	NM_001135105,NM_032115,NM_001135107,NM_001135106,NM_001135111,NM_031460,NM_002062	chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,-,-,-,+	KCNK16,KCNK16,KCNK16,KCNK16,KCNK17,KCNK17,GLP1R	6536,6536,6536,6536,-751,-752,-266482
chr1:38274788-38275577	chr1	+	38274936	38275513	True	NM_001142726,NM_198446,NM_024640	chr1,chr1,chr1	+,+,-	C1orf122,C1orf122,YRDC	-1514,-1514,-1071
chr16:67312875-67313091	chr16	+	67312889	67313107	True	NM_013241,NM_015432,NM_001129728,NM_001129729,NM_001129727,NM_001129731	chr16,chr16,chr16,chr16,chr16,chr16	-,+,+,+,+,+	FHOD1,PLEKHG4,PLEKHG4,PLEKHG4,PLEKHG4,PLEKHG4	-31464,-1527,-42,381,-864,384
chr17:73127003-73127224	chr17	+	73127071	73127237	True	NM_014595,NM_024585	chr17,chr17	-,+	NT5C,ARMC7	690,-21040
chr1:205912644-205912857	chr1	+	205912667	205912728	True	NM_052934,NM_001123168,NM_134325	chr1,chr1,chr1	-,+,-	SLC26A9,FAM72A,SLC26A9	-79,226182,-79
chr17:48610070-48610702	chr17	+	48610105	48610740	True	NM_017957,NM_001267	chr17,chr17	+,-	EPN3,CHAD	-108,-63878
chr2:75788329-75788764	chr2	+	75788409	75788809	True	NM_014763,NM_032181,NM_001135032	chr2,chr2,chr2	+,-,-	MRPL19,FAM176A,FAM176A	85099,8089,-317
chr17:64311895-64312551	chr17	+	64311907	64312569	True	NM_002737,NM_000042	chr17,chr17	+,-	PRKCA,APOH	-13033,-86351
chr5:177556251-177556837	chr5	+	177556256	177556630	True	NM_022762,NM_001034833	chr5,chr5	+,-	RMND5B,NHP2	1397,24381
chr19:12994379-12995794	chr19	+	12994650	12995836	True	NM_006563,NM_001375,NM_000159,NM_013976	chr19,chr19,chr19,chr19	-,-,+,+	KLF1,DNASE2,GCDH,GCDH	2231,-2315,6137,6137
chr9:15507471-15508080	chr9	+	15507747	15508097	True	NM_173550,NM_021144,NM_001128217,NM_033222	chr9,chr9,chr9,chr9	+,-,-,-	C9orf93,PSIP1,PSIP1,PSIP1	44999,2246,2962,2962
chr17:8055007-8055337	chr17	+	8055006	8055268	True	NM_002616,NR_037447	chr17,chr17	-,+	PER1,MIR3676	535,35224
chr17:79343159-79343495	chr17	+	79343456	79343518	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	30021,-38982
chr1:144310838-144311498	chr1	+	144310859	144311349	True	NR_024510,NM_001037675	chr1,chr1	-,+	LOC728855,NBPF9	29474,303609
chr1:144310838-144311498	chr1	+	144491088	144491578	False	NR_024584,NM_001037675	chr1,chr1	-,+	LOC728875,NBPF9	30441,123380
chr1:144310838-144311498	chr1	-	149605943	149606433	False	NM_001161334,NR_024510	chr1,chr1	-,+	HIST2H2BF,LOC728855	177550,-29541
chr2:33701283-33701710	chr2	+	33701289	33701755	True	NM_015475,NM_001139488	chr2,chr2	-,+	FAM98A,RASGRP3	122657,-19
chrX:134881923-134882767	chrX	+	134882089	134882679	True	NM_001017436,NM_001017435	chrX,chrX	-,+	CT45A4,CT45A3	54111,808
chrX:134881923-134882767	chrX	-	134937544	134938134	False	NM_018666,NM_001017436	chrX,chrX	+,-	SAGE1,CT45A4	37650,-809
chrX:134881923-134882767	chrX	-	134954799	134955389	False	NM_001007551,NM_018666,NM_001172288	chrX,chrX,chrX	-,+,-	CT45A5,SAGE1,CT45A5	-805,20395,-805
chrX:134881923-134882767	chrX	+	134845818	134845874	False	NM_001017417,NM_001017436	chrX,chrX	+,-	CT45A1,CT45A4	1310,90917
chrX:134881923-134882767	chrX	+	134864814	134865404	False	NM_152582,NM_001017436	chrX,chrX	+,+	CT45A2,CT45A4	809,809
chr5:178989330-178990613	chr5	+	178989599	178990635	True	NM_005520,NM_001040451,NM_001040452	chr5,chr5,chr5	-,+,+	HNRNPH1,RUFY1,RUFY1	60137,-2920,-2920
chr9:91922221-91923752	chr9	+	91922557	91923724	True	NM_016848,NM_001827,NR_036108,NM_024077	chr9,chr9,chr9,chr9	-,+,+,+	SHC3,CKS2,MIR3153,SECISBP2	-128875,2388,3415,9687
chr7:73625478-73625878	chr7	+	73625521	73625587	True	NM_032463,NM_032464,NM_014146,NM_002914	chr7,chr7,chr7,chr7	+,+,+,-	LAT2,LAT2,LAT2,RFC2	-1485,-1485,-1485,43201
chr16:5117846-5118268	chr16	+	5117845	5118135	True	NM_001098514,NM_152459,NM_019109	chr16,chr16,chr16	-,-,+	C16orf89,C16orf89,ALG1	-1734,-1734,3674
chr9:138989145-138989429	chr9	+	138989341	138989477	True	NM_015597,NM_144653	chr9,chr9	+,-	GPSM1,NACC2	232454,-2210
chr19:8673159-8674235	chr19	+	8673168	8674270	True	NM_030957,NM_031203	chr19,chr19	-,+	ADAMTS10,HNRNPM	1368,-163416
chr7:30338957-30339554	chr7	+	30339077	30339397	True	NR_030319,NR_037513	chr7,chr7	+,-	MIR550A1,MIR550B1	-9726,-9571
chr22:35458616-35460130	chr22	+	35458842	35460120	True	NM_001008494,NM_005368	chr22,chr22	+,-	ISX,MB	2009,553315
chr9:116840711-116841261	chr9	+	116840724	116841107	True	NM_032888,NM_001633	chr9,chr9	+,-	COL27A1,AMBP	77123,28
chr1:90109407-90109892	chr1	+	90109406	90109695	True	NR_033981,NM_032270	chr1,chr1	-,+	FLJ27354,LRRC8C	-10953,-10820
chr9:100952257-100952547	chr9	+	100952459	100952589	True	NM_018946,NM_052820	chr9,chr9	+,-	NANS,CORO2A	-133553,2419
chr20:49574847-49575079	chr20	+	49574935	49575125	True	NM_003859,NM_014484	chr20,chr20	-,+	DPM1,MOCS3	-7,237
chr2:62133344-62134497	chr2	+	62133402	62134231	True	NM_006430,NM_152516	chr2,chr2	-,+	CCT4,COMMD1	-17611,-650
chrX:82764439-82764850	chrX	+	82764731	82764901	True	NM_014496,NM_000307	chrX,chrX	-,+	RPS6KA6,POU3F4	678094,-1525
chr16:73127123-73127486	chr16	+	73127151	73127533	True	NM_001164766,NR_027756	chr16,chr16	-,+	ZFHX3,HTA	-34617,-954
chr20:61868662-61869043	chr20	+	61868674	61869042	True	NM_139317,NM_022161,NR_036163,NM_152864	chr20,chr20,chr20,chr20	+,+,+,-	BIRC7,BIRC7,MIR3196,NKAIN4	-1449,-1449,1088,16900
chr5:134870247-134870475	chr5	+	134870247	134870445	True	NM_145282,NM_006161	chr5,chr5	+,-	SLC25A48,NEUROG1	299919,1244
chr6:114379245-114379863	chr6	+	114379248	114379912	True	NR_027060,NM_153612	chr6,chr6	+,-	FLJ34503,HS3ST5	-153748,4179
chr19:841818-842709	chr19	+	842247	842325	True	NM_001972,NM_002777,NM_024888	chr19,chr19,chr19	+,+,-	ELANE,PRTN3,LPPR3	9965,-1313,-20295
chr17:40345028-40345920	chr17	+	40345055	40345861	True	NR_024573,NM_033194,NM_032484,NM_001524,NM_001142622,NM_001142623	chr17,chr17,chr17,chr17,chr17,chr17	-,+,-,-,-,-	GHDC,HSPB9,GHDC,HCRT,GHDC,GHDC	444,-70350,739,-7585,739,739
chr5:762323-762763	chr5	+	762424	762796	True	NM_001166260,NM_007030	chr5,chr5	+,-	TRIP13,TPPP	130172,-68914
chr4:170713318-170714955	chr4	+	170713479	170714654	True	NM_173872,NM_017867	chr4,chr4	+,-	CLCN3,C4orf27	-171808,-34386
chr10:99389983-99391630	chr10	+	99390170	99391194	True	NM_018425,NM_178832,NM_001098831	chr10,chr10,chr10	+,-,-	PI4K2A,MORN4,MORN4	9248,2212,2781
chr19:55971137-55971784	chr19	+	55971423	55971769	True	NM_024710,NM_033113,NM_001136202,NM_001136201	chr19,chr19,chr19,chr19	-,+,-,-	ISOC2,ZNF628,ISOC2,ISOC2	1330,15929,1330,1330
chr19:43689021-43690022	chr19	+	43689126	43690050	True	NM_002781,NM_001130014,NR_026881	chr19,chr19,chr19	-,-,+	PSG5,PSG5,PRG1	688,688,163157
chr21:40983677-40984277	chr21	+	40983751	40984321	True	NR_026543,NR_026542,NM_006057	chr21,chr21,chr21	-,-,+	C21orf88,C21orf88,B3GALT5	478,478,44932
chr3:66541395-66542682	chr3	+	66541476	66542690	True	NR_028475,NM_015541	chr3,chr3	+,-	SLC25A26,LRIG1	-270365,8216
chr16:753071-754296	chr16	+	753085	754287	True	NM_153350,NM_024042	chr16,chr16	-,+	FBXL16,METRN	1588,10885
chr2:178785711-178787340	chr2	+	178786087	178787290	True	NM_001077358,NM_152945	chr2,chr2	-,+	PDE11A,RBM45	324,189891
chr9:42859901-42861499	chr9	+	42860164	42861512	True	NR_026759,NR_026558	chr9,chr9	-,+	FAM95B1,AQP7P3	171850,-2063
chr9:42859901-42861499	chr9	-	69647837	69649185	False	NM_001085457,NR_024443	chr9,chr9	-,+	CBWD6,LOC100133920	-385244,2175
chr9:42859901-42861499	chr9	+	67033164	67034512	False	NR_024443,NR_024496	chr9,chr9	-,+	LOC100133920,LOC442421	-2182,-538946
chr9:42859901-42861499	chr9	-	67285896	67287202	False	NM_032250,NR_002817	chr9,chr9	+,-	ANKRD20A1,AQP7P1	639558,2340
chr11:10710874-10711657	chr11	+	10710878	10711619	True	NM_001100167,NM_130385,NM_014633,NM_001100163	chr11,chr11,chr11,chr11	-,-,+,-	MRVI1,MRVI1,CTR9,MRVI1	3541,3971,61191,3971
chr12:56755175-56757093	chr12	+	56755234	56756808	True	NM_198332,NM_005419,NM_016584,NM_001638	chr12,chr12,chr12,chr12	-,-,+,-	STAT2,STAT2,IL23A,APOF	-1197,-1197,-22622,57
chr16:430017-430457	chr16	+	430027	430351	True	NM_021259,NM_006428,NR_024453	chr16,chr16,chr16	-,-,+	TMEM8A,MRPL28,LOC100134368	1649,-9458,1889
chr5:140773222-140773464	chr5	+	140773366	140773502	True	NM_018925,NM_018921,NM_003736,NM_032099,NM_032098,NM_032088,NM_032089,NM_005642,NM_014004	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,+,-,+	PCDHGB5,PCDHGA9,PCDHGB4,PCDHGB5,PCDHGB4,PCDHGA8,PCDHGA9,TAF7,PCDHGA8	4192,9017,-5972,4192,-5972,-1941,9017,-73015,-1941
chrX:134484203-134485615	chrX	+	134484308	134485431	True	NM_007131,NM_152695	chrX,chrX	-,+	ZNF75D,ZNF449	-54343,-5665
chr14:80666774-80667627	chr14	+	80666868	80667605	True	NM_001018036,NM_001007023	chr14,chr14	+,-	TSHR,DIO2	754263,10294
chr1:161101409-161101625	chr1	+	161101425	161101617	True	NM_001185094,NM_032998,NM_001039712,NM_001039711	chr1,chr1,chr1,chr1	+,-,-,-	NIT1,DEDD,DEDD,DEDD	-13568,911,689,911
chrX:37438155-37438862	chrX	+	37438391	37438747	True	NM_001170331,NM_006520,NM_198511	chrX,chrX,chrX	+,-,+	LANCL3,DYNLT3,LANCL3	-7632,268192,-7632
chr18:3245084-3245976	chr18	+	3245123	3245999	True	NM_019856,NM_006471	chr18,chr18	-,+	MYOM1,MYL12A	-25017,1528
chr18:44702509-44702720	chr18	+	44702550	44702718	True	NM_016097,NM_031303	chr18,chr18	-,+	IER3IP1,KATNAL2	77,-175814
chr2:159333857-159335826	chr2	+	159334006	159335545	True	NM_001171637,NM_003628	chr2,chr2	-,+	CCDC148,PKP4	-20741,-20581
chrX:150564936-150565436	chrX	+	150564946	150565386	True	NM_001017980,NM_134446	chrX,chrX	+,-	VMA21,CD99L2	270,-497657
chr1:160121061-160122546	chr1	+	160121082	160122340	True	NM_144699,NM_052868	chr1,chr1	+,-	ATP1A4,IGSF8	79,-52674
chr1:66998561-66998934	chr1	+	66998677	66998797	True	NM_005478,NM_032291	chr1,chr1	-,+	INSL5,SGIP1	268195,1027
chr8:144817850-144818607	chr8	+	144817896	144818298	True	NR_033849,NM_198488	chr8,chr8	+,-	LOC100128338,FAM83H	-1637,-1982
chr15:41219278-41219776	chr15	+	41219284	41219754	True	NM_019074,NM_133639	chr15,chr15	+,-	DLL4,RHOV	1776,-52797
chr19:14168484-14168746	chr19	+	14168587	14168657	True	NR_024282,NM_001145028	chr19,chr19	+,-	LOC113230,PALM3	15163,1364
chr15:84321563-84322045	chr15	+	84321693	84322091	True	NM_207517,NM_001717	chr15,chr15	+,-	ADAMTSL3,BNC1	746,-368225
chr17:39673387-39674192	chr17	+	39673652	39674082	True	NM_005801,NM_002275	chr17,chr17	+,-	EIF1,KRT15	171044,1238
chr1:48372334-48372582	chr1	+	48372407	48372629	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	89983,315727
chr12:13252875-13253662	chr12	+	13252922	13253609	True	NM_001080555,NM_001080554,NM_031289,NM_020853,NM_153823	chr12,chr12,chr12,chr12,chr12	-,-,-,+,-	GSG1,GSG1,GSG1,KIAA1467,GSG1	3067,3067,-4213,-55658,-4213
chr7:73867179-73867509	chr7	+	73867220	73867558	True	NM_016328,NM_001199207,NM_005685,NM_181471	chr7,chr7,chr7,chr7	+,+,+,-	GTF2IRD1,GTF2IRD1,GTF2IRD1,RFC2	561,561,561,-198482
chr17:57782600-57783843	chr17	+	57782609	57783720	True	NM_030938,NM_016077	chr17,chr17	+,-	VMP1,PTRH2	1142,1186
chr11:118400557-118401019	chr11	+	118400579	118401049	True	NM_001144038,NM_001144035,NM_001144034,NM_001144037,NM_001144036,NM_001080441,NM_001168618,NM_032780	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,+,-,+	TMEM25,TMEM25,TMEM25,TMEM25,TMEM25,TTC36,IFT46,TMEM25	753,753,753,753,753,-2420,35792,753
chr8:8024485-8025382	chr8	+	8024749	8024811	True	NR_031689,NR_024362	chr8,chr8	-,+	MIR548I3,FLJ10661	-78138,61280
chr8:8024485-8025382	chr8	-	12355885	12355947	False	NR_026789,NM_001137610	chr8,chr8	+,-	FAM66A,FAM86B2	-136408,-62033
chrX:70316384-70316603	chrX	+	70316390	70316540	True	NM_005938,NM_001170931,NM_001025265	chrX,chrX,chrX	+,+,-	FOXO4,FOXO4,CXorf65	-442,-442,10148
chr12:91348002-91348203	chr12	+	91348001	91348213	True	NM_152638,NR_028138	chr12,chr12	-,+	C12orf12,LOC338758	790,-1245320
chr9:97489075-97489292	chr9	+	97489127	97489291	True	NM_001127628,NM_032823,NM_001193331	chr9,chr9,chr9	-,+,+	FBP1,C9orf3,C9orf3	-86596,-227,-227
chr1:150894066-150895577	chr1	+	150894424	150895417	True	NM_001145415,NM_001668,NR_026977,NM_012432	chr1,chr1,chr1,chr1	+,-,+,+	SETDB1,ARNT,SETDB1,SETDB1	3397,-45180,3407,3397
chr4:169059271-169060727	chr4	+	169059671	169060758	True	NM_017631,NM_007193	chr4,chr4	-,+	DDX60,ANXA10	179250,-46041
chr19:37156332-37157087	chr19	+	37156683	37156993	True	NM_153257,NM_152603	chr19,chr19	-,+	ZNF461,ZNF567	796,23308
chr19:30446164-30447727	chr19	+	30446183	30447521	True	NM_134447,NM_031448	chr19,chr19	+,-	C19orf2,C19orf12	-12822,-239731
chr17:38083995-38084295	chr17	+	38084014	38084212	True	NM_001165959,NM_139280,NM_001165958,NM_001042471,NM_001195545	chr17,chr17,chr17,chr17,chr17	-,-,-,-,+	GSDMB,ORMDL3,GSDMB,GSDMB,LOC100505591	-9111,-130,-9111,-9111,13514
chr4:99177764-99178096	chr4	+	99177764	99177941	True	NM_021159,NM_174952,NM_001100428,NM_001100429,NM_001100430,NM_001100426,NM_001100427	chr4,chr4,chr4,chr4,chr4,chr4,chr4	+,-,+,+,+,+,+	RAP1GDS1,C4orf37,RAP1GDS1,RAP1GDS1,RAP1GDS1,RAP1GDS1,RAP1GDS1	4585,-113373,4585,4585,4585,4585,4585
chr1:155829407-155830140	chr1	+	155829510	155829872	True	NM_001037533,NM_152280,NM_032292	chr1,chr1,chr1	-,+,-	GON4L,SYT11,GON4L	-2538,-301,-2538
chr10:25283872-25285096	chr10	+	25284003	25284795	True	NM_024838,NM_145010	chr10,chr10	+,-	THNSL1,ENKUR	20712,20285
chr1:35734827-35735099	chr1	+	35734969	35735143	True	NM_005066,NM_005095	chr1,chr1	-,+	SFPQ,ZMYM4	-76226,-465
chr11:74660628-74662182	chr11	+	74660656	74662193	True	NM_182969,NM_014752	chr11,chr11	-,+	XRRA1,SPCS2	-424,-415
chrX:138727795-138729054	chrX	+	138727904	138728997	True	NM_001171879,NM_001171878,NM_005369,NM_000133,NM_001171877	chrX,chrX,chrX,chrX,chrX	-,-,-,+,-	MCF2,MCF2,MCF2,F9,MCF2	-2904,-2904,-2904,-115072,-2904
chr14:23622945-23623629	chr14	+	23622949	23623451	True	NM_017924,NM_182728	chr14,chr14	+,-	C14orf119,SLC7A8	-58212,209
chr17:7217365-7218201	chr17	+	7217383	7218151	True	NM_001970,NM_001143761,NM_004489,NM_001143760,NM_001143762	chr17,chr17,chr17,chr17,chr17	+,+,-,+,+	EIF5A,EIF5A,GPS2,EIF5A,EIF5A	-6578,-6146,557,-7116,-5740
chr13:76054090-76054874	chr13	+	76054237	76054851	True	NM_014832,NM_006002	chr13,chr13	-,+	TBC1D4,UCHL3	1451,69075
chr9:104296130-104297280	chr9	+	104296197	104296981	True	NM_019592,NM_032342	chr9,chr9	+,-	RNF20,C9orf125	-115,-46722
chr5:36612541-36612917	chr5	+	36612729	36612951	True	NM_001166695,NM_001166696,NM_004172,NM_145000	chr5,chr5,chr5,chr5	+,+,+,-	SLC1A3,SLC1A3,SLC1A3,RANBP3L	-4358,-6332,-6332,-310718
chr18:74538373-74539145	chr18	+	74538382	74538830	True	NM_007345,NM_001025081	chr18,chr18	+,-	ZNF236,MBP	-2317,190284
chr17:2616467-2617129	chr17	+	2616968	2617176	True	NM_015229,NM_001100398	chr17,chr17	-,+	KIAA0664,RAP1GAP2	-2041,82555
chr17:19093055-19093293	chr17	+	19093116	19093293	True	NM_006613,NM_001102664	chr17,chr17	-,+	GRAP,EPN2	-142780,47396
chr17:19093055-19093293	chr17	-	19091593	19091770	False	NM_006613,NM_001102664	chr17,chr17	-,+	GRAP,EPN2	-141257,48919
chr17:19093055-19093293	chr17	+	19015506	19015672	False	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	15109,-65170
chr17:19093055-19093293	chr17	+,-	18965501	18967143	False	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	63638,-15165
chr3:31494886-31495899	chr3	+	31495016	31495916	True	NM_178862,NM_001174060	chr3,chr3	+,-	STT3B,OSBPL10	78574,527476
chr19:1251139-1251432	chr19	+	1251151	1251431	True	NM_001001975,NM_152769,NM_001687,NM_177401	chr19,chr19,chr19,chr19	+,-,+,+	ATP5D,C19orf26,ATP5D,MIDN	-9453,-13161,-9453,-2650
chr2:70519774-70520480	chr2	+	70519809	70520447	True	NM_032822,NM_003096,NM_016297	chr2,chr2,chr2	-,-,+	FAM136A,SNRPG,PCYOX1	8828,477,-34636
chr8:40011512-40013107	chr8	+	40011524	40012987	True	NM_020130,NM_001464	chr8,chr8	+,-	C8orf4,ADAM2	-586,-315745
chr7:14826139-14827664	chr7	+	14826471	14827661	True	NM_001195280,NM_004080	chr7,chr7	+,-	LOC100506049,DGKB	1738843,53464
chr1:150520730-150521394	chr1	+	150521001	150521285	True	NM_019032,NM_001197320,NM_025008,NR_036211	chr1,chr1,chr1,chr1	+,-,+,+	ADAMTSL4,MCL1,ADAMTSL4,MIR4257	612,30979,612,3119
chr1:20985507-20987329	chr1	+	20985856	20987192	True	NM_032409,NM_005216	chr1,chr1	+,-	PINK1,DDOST	-25959,895
chr7:6389624-6390678	chr7	+	6389900	6390343	True	NM_006908,NM_001037163	chr7,chr7	+,-	RAC1,C7orf70	23782,-1310
chrX:70288410-70289510	chrX	+	70288476	70289072	True	NM_001170931,NM_013346	chrX,chrX	+,-	FOXO4,SNX12	26926,-245
chr10:24498514-24498888	chr10	+	24498535	24498900	True	NM_019590,NM_001098501,NM_020824	chr10,chr10,chr10	+,+,-	KIAA1217,KIAA1217,ARHGAP21	-867,-867,513748
chr7:112108106-112108645	chr7	+	112108106	112108496	True	NM_014705,NM_001134468	chr7,chr7	-,+	DOCK4,C7orf53	-261644,12411
chr19:54850146-54850639	chr19	+	54850185	54850517	True	NM_012276,NM_001005367	chr19,chr19	-,+	LILRA4,TTYH1	-46,76087
chr6:42858645-42858888	chr6	+	42858678	42858880	True	NM_001008739,NM_198486	chr6,chr6	-,+	C6orf226,RPL7L1	-124,-11058
chrX:74493740-74494075	chrX	+	74493786	74494066	True	NM_145052,NM_004299,NR_030774	chrX,chrX,chrX	+,-,+	UPRT,ABCB7,UPRT	-23,-117654,-23
chr12:93576668-93576900	chr12	+	93576667	93576734	True	NM_019094,NM_003566	chr12,chr12	+,-	NUDT4,EEA1	194966,-253560
chr17:40340588-40340863	chr17	+	40340624	40340912	True	NR_024573,NM_012285,NM_033194,NM_032484,NM_001524,NM_001142622,NM_001142623	chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,-,-,-,-	GHDC,KCNH4,HSPB9,GHDC,HCRT,GHDC,GHDC	5393,-7328,-65919,5688,-3154,5688,5688
chr19:54415984-54416251	chr19	+	54416001	54416277	True	NM_144687,NM_031896	chr19,chr19	-,+	NLRP12,CACNG7	-88353,-61
chr12:76953845-76954889	chr12	+	76953966	76954795	True	NM_020841,NM_001003712,NM_015336	chr12,chr12,chr12	-,-,+	OSBPL8,OSBPL8,ZDHHC17	-377,-377,203058
chr1:12039579-12039806	chr1	+	12039627	12039801	True	NM_001127660,NM_014874,NM_138346	chr1,chr1,chr1	+,+,-	MFN2,MFN2,KIAA2013	436,436,-53142
chr12:21800880-21801292	chr12	+	21800978	21801332	True	NM_030572,NM_002300,NM_001174097	chr12,chr12,chr12	+,-,-	C12orf39,LDHB,LDHB	-121782,9507,9446
chr10:116584059-116585466	chr10	+	116584160	116585451	True	NM_001135051,NM_020940,NM_001003408	chr10,chr10,chr10	+,+,-	FAM160B1,FAM160B1,ABLIM1	-2715,-2715,-139746
chr13:22016816-22018217	chr13	+	22017071	22017767	True	NM_153251,NM_002010	chr13,chr13	-,+	ZDHHC20,FGF9	15798,227447
chr19:30155486-30155798	chr19	+	30155488	30155668	True	NM_001031726,NM_024310	chr19,chr19	-,+	C19orf12,PLEKHF1	50347,658
chr10:29115564-29115800	chr10	+	29115564	29115623	True	NR_033805,NM_012342	chr10,chr10	-,+	LOC220906,BAMBI	-294281,-149191
chr22:25003658-25004206	chr22	+	25003678	25003738	True	NM_005265,NM_207644,NM_001032365,NM_001032364	chr22,chr22,chr22,chr22	+,-,+,+	GGT1,C22orf36,GGT1,GGT1	-4549,-14643,-103,-4605
chr12:51788036-51788389	chr12	+	51788036	51788280	True	NM_004858,NM_007210	chr12,chr12	+,-	SLC4A8,GALNT6	30313,-2836
chr11:76959925-76960233	chr11	+	76959990	76960059	True	NM_182833,NM_001127180	chr11,chr11	-,+	GDPD4,MYO7A	38457,-120727
chr19:47761236-47761805	chr19	+	47761275	47761844	True	NM_015603,NM_001127242	chr19,chr19	+,-	CCDC9,BBC3	-1595,-25252
chr2:112641564-112641771	chr2	+	112641663	112641767	True	NM_022662,NM_006343	chr2,chr2	-,+	ANAPC1,MERTK	24,14423
chr22:21212393-21212752	chr22	+	21212417	21212485	True	NM_058004,NM_004782	chr22,chr22	-,+	PI4KA,SNAP29	635,806
chr16:73127486-73127838	chr16	+	73127543	73127861	True	NM_001164766,NR_027756	chr16,chr16	-,+	ZFHX3,HTA	-35009,-1350
chr22:42896958-42897248	chr22	+	42897148	42897264	True	NR_027786,NM_015703	chr22,chr22	+,-	SERHL,RRP7A	-614,18615
chr16:2867329-2867563	chr16	+	2867407	2867499	True	NR_026864,NM_144956,NM_006799,NM_144957	chr16,chr16,chr16,chr16	-,+,+,+	PRSS30P,PRSS21,PRSS21,PRSS21	25303,-294,-294,-294
chr20:4662757-4664080	chr20	+	4662824	4664126	True	NM_000311,NM_001080121,NM_001080122,NM_001080123,NM_183079,NR_024267	chr20,chr20,chr20,chr20,chr20,chr20	+,+,+,+,+,-	PRNP,PRNP,PRNP,PRNP,PRNP,PRNT	2670,2670,2670,3030,2670,57238
chr17:73201571-73202022	chr17	+	73201582	73202066	True	NM_001005849,NM_024844	chr17,chr17	-,+	SUMO2,NUP85	-22484,-36
chr1:12124267-12124522	chr1	+	12124266	12124442	True	NM_001243,NM_138346	chr1,chr1	+,-	TNFRSF8,KIAA2013	-883,-137781
chr10:82301480-82302244	chr10	+	82301495	82302023	True	NM_207372,NM_138812,NM_001145719	chr10,chr10,chr10	+,-,+	SH2D4B,DYDC1,SH2D4B	-3888,-184995,-971
chr15:50839281-50839670	chr15	+	50839474	50839638	True	NM_005154,NM_203494	chr15,chr15	+,-	USP8,USP50	-122947,-572
chr15:23087859-23088254	chr15	+	23087859	23088258	True	NM_001142275,NM_144599,NM_001033028	chr15,chr15,chr15	-,-,+	NIPA1,NIPA1,CYFIP1	-1016,-1423,-132155
chr4:40197734-40198602	chr4	+	40197817	40198650	True	NM_004310,NR_027277	chr4,chr4	+,-	RHOH,LOC344967	18,-138998
chr1:171640108-171640587	chr1	+	171640205	171640354	True	NM_001007239,NM_000261	chr1,chr1	+,-	METTL13,MYOC	110406,-18432
chr1:190447907-190448124	chr1	+	190447912	190448122	True	NM_199051,NR_033922	chr1,chr1	-,+	FAM5C,LOC440704	-1153,145897
chr12:96309683-96311365	chr12	+	96309837	96311012	True	NM_152435,NM_182496	chr12,chr12	+,-	AMDHD1,CCDC38	26058,25466
chr21:27012125-27012594	chr21	+	27012177	27012561	True	NM_021219,NM_080794	chr21,chr21	+,-	JAM2,MRPL39	-639,-32376
chrX:64755374-64756301	chrX	+	64755570	64755913	True	NM_001170650,NM_031206,NM_001170649,NM_001010888	chrX,chrX,chrX,chrX	-,-,-,+	LAS1L,LAS1L,LAS1L,ZC3H12B	-884,-884,-884,-47006
chr8:117950849-117951591	chr8	+	117951051	117951605	True	NM_006265,NM_001025357	chr8,chr8	-,+	RAD21,C8orf85	-63946,-639
chr7:102922471-102923413	chr7	+	102923119	102923439	True	NR_027768,NR_003561,NM_004279	chr7,chr7,chr7	-,-,+	DPY19L2P2,DPY19L2P2,PMPCB	-2206,-2360,14433
chr7:102922471-102923413	chr7	+	35229642	35229692	False	NM_001077653,NM_207173	chr7,chr7	-,+	TBX20,NPSR1	64069,-531796
chr7:102922471-102923413	chr7	-	89744597	89744904	False	NR_003551,NM_152706	chr7,chr7	+,-	DPY19L2P4,C7orf62	3809,-1319566
chr7:102922471-102923413	chr12	+	64066142	64066449	False	NM_014254,NM_173812	chr12,chr12	+,-	TMEM5,DPY19L2	107187,-3788
chr3:46757075-46757408	chr3	+	46757083	46757399	True	NM_013270,NM_147196	chr3,chr3	-,+	PRSS50,TMIE	2024,-14311
chr4:5705279-5706352	chr4	+	5705390	5706400	True	NM_147127,NM_001166136,NM_153717	chr4,chr4,chr4	-,-,+	EVC2,EVC2,EVC	3944,4925,6523
chr2:26918988-26920105	chr2	+	26919030	26920090	True	NM_002246,NM_001029881	chr2,chr2	+,-	KCNK3,CIB4	-3508,-54819
chr12:120739070-120739322	chr12	+	120739242	120739333	True	NM_000928,NM_012240	chr12,chr12	-,+	PLA2G1B,SIRT4	26310,790
chr3:100698561-100699166	chr3	+	100698576	100699079	True	NM_015429,NM_001195478	chr3,chr3	-,+	ABI3BP,TFG	13312,-270254
chr20:748090-749076	chr20	+	748414	749008	True	NM_033409,NM_001042353	chr20,chr20	-,+	C20orf54,FAM110A	270,65347
chr22:36786017-36787372	chr22	+	36786308	36786734	True	NM_145343,NM_002473	chr22,chr22	+,-	APOL1,MYH9	-137251,-2245
chr3:38180373-38180680	chr3	+	38180425	38180722	True	NM_001172566,NM_001172567,NR_024024,NM_001172568,NM_001172569,NM_001130410,NM_001607,NM_002468	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,-,+,+,-,-,+	MYD88,MYD88,ACAA1,MYD88,MYD88,ACAA1,ACAA1,MYD88	-507,-507,-1692,-507,-507,-1692,-1692,-507
chr20:35578322-35579451	chr20	+	35578327	35579186	True	NM_015474,NM_080628	chr20,chr20	-,+	SAMHD1,C20orf118	1110,-73808
chr17:46693237-46694310	chr17	+	46693248	46694286	True	NM_024016,NM_004502,NR_033205,NM_024017	chr17,chr17,chr17,chr17	-,-,+,-	HOXB8,HOXB7,LOC404266,HOXB9	-947,-4865,-19986,9599
chr5:157880570-157881669	chr5	+	157880709	157881352	True	NM_014666,NM_173491	chr5,chr5	-,+	CLINT1,LSM11	-594526,-710012
chr1:55230405-55231129	chr1	+	55230415	55230841	True	NM_001110533,NM_152268	chr1,chr1	+,-	C1orf177,PARS2	40894,-189
chr16:2962551-2963398	chr16	+	2962550	2963276	True	NM_032296,NM_022119,NM_020912	chr16,chr16,chr16	+,-,+	FLYWCH1,PRSS22,FLYWCH1	-621,-54379,-621
chr16:67512075-67513822	chr16	+	67512101	67513800	True	NM_004691,NM_001138,NM_000196	chr16,chr16,chr16	-,-,+	ATP6V0D1,AGRP,HSD11B2	1339,3966,-47116
chr5:5391049-5392035	chr5	+	5391275	5391866	True	NM_015325,NR_028351	chr5,chr5	+,-	KIAA0947,FLJ33360	30940,945597
chr3:181352381-181352821	chr3	+	181352419	181352638	True	NR_033725,NR_004053	chr3,chr3	-,+	DNAJC19,SOX2OT	-644857,-24319
chr19:22606532-22608047	chr19	+	22606881	22607923	True	NR_033899,NM_001098626	chr19,chr19	+,-	LOC440518,ZNF98	171135,-1733
chr1:116205498-116206715	chr1	+	116205720	116206743	True	NM_001232,NM_001172412	chr1,chr1	-,+	CASQ2,VANGL1	104733,-20521
chr16:88932370-88933180	chr16	+	88932380	88932826	True	NM_001080487,NM_000512,NM_016209	chr16,chr16,chr16	-,-,+	PABPN1L,GALNS,TRAPPC2L	292,-9006,-8925
chr11:47615308-47615751	chr11	+	47615440	47615758	True	NM_001164379,NM_031909	chr11,chr11	+,-	FAM180B,C1QTNF4	-7266,253
chr17:18854858-18855207	chr17	+	18854918	18855234	True	NM_001042450,NM_001039999,NM_152351	chr17,chr17,chr17	+,-,+	SLC5A10,FAM83G,SLC5A10	243,52876,243
chr22:50150084-50151595	chr22	+	50150312	50151640	True	NM_014838,NR_026993	chr22,chr22	+,-	ZBED4,LOC90834	95856,22368
chr14:23833418-23834022	chr14	+	23833465	23833945	True	NM_032459,NM_172314,NM_005864,NM_022789	chr14,chr14,chr14,chr14	-,+,-,+	EFS,IL25,EFS,IL25	947,8072,947,8124
chr3:52811344-52811801	chr3	+	52811353	52811779	True	NM_003157,NM_001166436,NM_001166435,NM_002215,NM_001193533,NM_001166434	chr3,chr3,chr3,chr3,chr3,chr3	-,+,+,+,-,+	NEK4,ITIH1,ITIH1,ITIH1,NEK4,ITIH1	-6388,2157,2157,-3,-6388,743
chr1:210499561-210500386	chr1	+	210499833	210500417	True	NM_001170588,NM_018194,NM_001170580,NM_001170564,NM_001170587,NR_024337,NM_001122834	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-,+	HHAT,HHAT,HHAT,HHAT,HHAT,C1orf133,HHAT	1832,1832,2222,1178,1832,-92367,1178
chr15:84879093-84879535	chr15	+	84879151	84879268	True	NR_027001,NR_033738	chr15,chr15	-,+	LOC388152,LOC440300	19705,-18602
chr15:84879093-84879535	chr15	+	85758241	85758358	False	NM_006738,NM_014300	chr15,chr15	+,-	AKAP13,SEC11A	165512,-498567
chr12:106532139-106532370	chr12	+	106532185	106532307	True	NM_014840,NM_152772	chr12,chr12	-,+	NUAK1,TCP11L2	1554,164273
chr3:187000207-187001573	chr3	+	187000453	187001463	True	NM_022147,NM_001031849,NM_139125,NR_033519,NM_153708,NM_001879	chr3,chr3,chr3,chr3,chr3,chr3	+,-,-,-,+,-	RTP4,MASP1,MASP1,MASP1,RTP1,MASP1	84704,8405,8405,8405,-85230,8405
chr3:48542091-48543971	chr3	+	48542381	48543742	True	NM_033629,NM_016479	chr3,chr3	+,-	TREX1,SHISA5	-35210,-720
chr12:106752115-106752429	chr12	+	106752131	106752458	True	NM_018082,NM_001160708,NM_006825	chr12,chr12,chr12	+,+,-	POLR3B,POLR3B,CKAP4	-752,-328,-110418
chr17:29054272-29055150	chr19	-	14299402	14299453	True	NR_024282,NM_001008701	chr19,chr19	+,-	LOC113230,LPHN1	-115633,17595
chr17:38857523-38857847	chr17	+	38857572	38857878	True	NM_019016,NM_001195387	chr17,chr17	-,+	KRT24,TMEM99	2174,117465
chr8:27166378-27168013	chr8	+	27166387	27167880	True	NM_173174,NM_171982	chr8,chr8	+,-	PTK2B,TRIM35	1118,1004
chr1:67573427-67574731	chr1	+	67573516	67573980	True	NM_001013674,NM_144701	chr1,chr1	-,+	C1orf141,IL23R	20290,58188
chr18:13917642-13918488	chr18	+	13917731	13918229	True	NM_005913,NM_000529	chr18,chr18	+,-	MC5R,MC2R	-92239,-2196
chr13:103492956-103494939	chr13	+	103493152	103494801	True	NM_000123,NM_024089	chr13,chr13	+,-	ERCC5,KDELC1	3389,-41748
chr1:157070799-157071109	chr1	+	157070833	157071109	True	NM_001004341,NR_001560	chr1,chr1	-,+	ETV3L,CYCSP52	-1233,27044
chr16:2589374-2589661	chr16	+	2589488	2589676	True	NM_001048212,NR_036139,NM_031268,NM_002613	chr16,chr16,chr16,chr16	-,-,+,+	CEMP1,MIR3178,PDPK1,PDPK1	-8079,-7482,-1570,-1570
chr3:11179413-11180832	chr3	+	11179460	11180249	True	NM_001098213,NR_027102	chr3,chr3	+,-	HRH1,LOC285370	-732,-373583
chr15:52864104-52864765	chr15	+	52864222	52864526	True	NM_006628,NM_002748	chr15,chr15	-,+	ARPP19,MAPK6	-3009,-552862
chr12:50450234-50450880	chr12	+	50450280	50450862	True	NM_020039,NM_001095,NM_013277	chr12,chr12,chr12	+,+,-	ACCN2,ACCN2,RACGAP1	624,624,-30973
chr9:133538117-133538637	chr9	+	133538213	133538531	True	NR_027440,NM_021619	chr9,chr9	-,+	LOC100272217,PRDM12	-83332,1449
chr3:126236188-126236502	chr3	+	126236221	126236447	True	NM_152889,NM_001165974,NM_144639	chr3,chr3,chr3	+,-,-	CHST13,UROC1,UROC1	6728,219,219
chr22:21126824-21127097	chr22	+	21126826	21127027	True	NM_002650,NM_000185	chr22,chr22	-,+	PI4KA,SERPIND1	-37871,1355
chr5:171704633-171705940	chr5	+	171704905	171705652	True	NM_001171183,NM_152277	chr5,chr5	+,-	EFCAB9,UBTD2	-83793,5200
chr3:196041096-196042425	chr3	+	196041356	196042051	True	NM_152672,NM_152773	chr3,chr3	+,-	OSTalpha,TCTEX1D2	-98032,3172
chr11:45928852-45929077	chr11	+	45928949	45929023	True	NM_152312,NM_001080446	chr11,chr11	+,-	GYLTL1B,C11orf94	14172,-116
chr12:107080793-107082133	chr12	+	107080797	107082182	True	NM_001033050,NM_032491	chr12,chr12	-,+	MTERFD3,RFX4	298797,-2365
chr16:29626780-29628269	chr16	+	29626827	29628089	True	NR_002593,NM_001030288	chr16,chr16	-,+	SLC7A5P1,SPN	-1789,46210
chr16:29626780-29628269	chr16	+	21533559	21533609	False	NM_001077180,NR_002594	chr16,chr16	+,-	METTL9,SLC7A5P2	77246,-1794
chr16:29626780-29628269	chr16	+	21542092	21542142	False	NM_001077180,NR_002594	chr16,chr16	+,-	METTL9,SLC7A5P2	68713,-10327
chr11:87905299-87905757	chr11	+	87905354	87905738	True	NM_022337,NM_000372	chr11,chr11	-,+	RAB38,TYR	2947,1005301
chr4:8872702-8873032	chr4	+	8872702	8873018	True	NM_018942,NM_001040071	chr4,chr4	-,+	HMX1,LOC650293	575,78458
chr1:17382460-17384335	chr1	+	17382498	17384109	True	NM_014675,NM_003000	chr1,chr1	+,-	CROCC,SDHB	-134104,-1833
chr7:140301462-140301824	chr7	+	140301461	140301779	True	NM_015689,NM_052853	chr7,chr7	-,+	DENND2A,ADCK2	613,71173
chr22:21983991-21984208	chr22	+	21984040	21984208	True	NM_152612,NM_001017964	chr22,chr22	+,-	CCDC116,YDJC	2877,182
chr19:18792495-18794389	chr19	+	18792974	18794296	True	NM_004750,NM_001098482,NM_015321	chr19,chr19,chr19	-,+,+	CRLF1,CRTC1,CRTC1	-75314,128,128
chr19:54851282-54851732	chr19	+	54851409	54851703	True	NM_012276,NM_001005367	chr19,chr19	-,+	LILRA4,TTYH1	-988,74901
chr12:123009845-123010459	chr12	+	123010067	123010335	True	NR_036436,NM_014708,NR_036434,NR_036435,NM_023012	chr12,chr12,chr12,chr12,chr12	-,+,-,-,-	RSRC2,KNTC1,RSRC2,RSRC2,RSRC2	1282,1473,1282,1282,1282
chr10:932949-934879	chr10	+	933071	934712	True	NM_015155,NM_012341	chr10,chr10	-,+	LARP4B,GTPBP4	-1369,99636
chr17:33776148-33776378	chr17	+	33776274	33776340	True	NM_144682,NR_003037	chr17,chr17	-,+	SLFN13,SNORD7	-418,124335
chr20:3709875-3710274	chr20	+	3709912	3710272	True	NM_052970,NM_001197327,NM_023068	chr20,chr20,chr20	+,+,-	HSPA12B,HSPA12B,SIGLEC1	3044,3044,-22137
chr6:122795245-122796650	chr6	+	122795298	122796522	True	NM_020755,NM_181794	chr6,chr6	-,+	SERINC1,PKIB	-2346,-2297
chr15:64128432-64129241	chr15	+	64128595	64129277	True	NM_003922,NM_203373	chr15,chr15	-,+	HERC1,FBXL22	-2448,-239094
chr19:37066615-37066841	chr19	+	37066615	37066737	True	NM_020951,NM_032825	chr19,chr19	-,+	ZNF529,ZNF382	-2418,29483
chr10:17660520-17662133	chr10	+	17660590	17662054	True	NM_003473,NM_014241	chr10,chr10	+,-	STAM,PTPLA	24069,-1217
chr3:169939887-169940121	chr3	+	169939892	169940156	True	NM_002740,NM_024947	chr3,chr3	+,-	PRKCI,PHC3	63,-40355
chr17:34058399-34058683	chr17	+	34058492	34058618	True	NM_033315,NM_139285	chr17,chr17	+,-	RASL10B,GAS2L2	60,21329
chrX:40943495-40943889	chrX	+	40943504	40943742	True	NM_001039591,NM_001039590,NR_027761	chrX,chrX,chrX	+,+,-	USP9X,USP9X,LOC100132831	1145,1145,-251055
chr18:43402841-43403515	chr18	+	43403080	43403548	True	NM_213602,NM_020964	chr18,chr18	+,-	SIGLEC15,EPG5	1996,143807
chr16:67061018-67061746	chr16	+	67061021	67061425	True	NR_024525,NM_001755,NM_022845	chr16,chr16,chr16	-,+,+	FAM96B,CBFB,CBFB	-92701,1624,1624
chr7:95409883-95410337	chr7	+	95409883	95410377	True	NM_001135556,NM_001135557,NM_002612,NM_004411	chr7,chr7,chr7,chr7	+,+,-,+	DYNC1I1,DYNC1I1,PDK4,DYNC1I1	-8123,-8123,-183958,-8123
chr16:46605239-46607081	chr16	+	46605289	46606443	True	NR_026556,NM_014321	chr16,chr16	-,+	ANKRD26P1,ORC6	-2280,117114
chr1:202131302-202131859	chr1	+	202131301	202131897	True	NR_002930,NR_037663,NR_037664,NM_001199797,NM_080588,NM_002832	chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,-,-,-	PTPRVP,PTPN7,PTPN7,PTPN7,PTPN7,PTPN7	5281,-585,-585,-585,-2182,-585
chr17:38975407-38976611	chr17	+	38975423	38976577	True	NM_145274,NM_000421,NM_001195387,NM_001195386	chr17,chr17,chr17,chr17	+,-,+,+	TMEM99,KRT10,TMEM99,TMEM99	-100,2337,-130,-37
chr12:4771731-4773307	chr12	+	4771743	4773255	True	NM_006422,NM_005002	chr12,chr12	-,+	AKAP3,NDUFA9	-17400,-13537
chr1:156696469-156696745	chr1	+	156696471	156696783	True	NM_030980,NM_015997,NM_001142560	chr1,chr1,chr1	-,+,+	ISG20L2,RRNAD1,RRNAD1	972,1479,1479
chr2:10834213-10835416	chr2	+	10834442	10835375	True	NM_001039362,NM_024894	chr2,chr2	+,-	ATP6V1C2,NOL10	26399,-4330
chr6:28411337-28411792	chr6	+	28411344	28411639	True	NM_001509,NM_001012455	chr6,chr6	+,-	GPX5,ZSCAN23	82149,-65
chr1:216871783-216872763	chr1	+	216872092	216872701	True	NM_138796,NR_024099	chr1,chr1	+,-	SPATA17,ESRRG	931993,24155
chr8:29600771-29602461	chr8	+	29601161	29602442	True	NR_026765,NR_024473	chr8,chr8	-,+	C8orf75,LOC286135	3233,176586
chr16:58125599-58127450	chr16	+	58125891	58126712	True	NM_013242,NM_002428	chr16,chr16	-,+	C16orf80,MMP15	36635,-66673
chr16:46653869-46654670	chr16	+	46654117	46654594	True	NM_014321,NM_024745	chr16,chr16	+,-	ORC6,SHCBP1	68963,772
chr1:78244459-78244748	chr1	+	78244657	78244730	True	NM_201626,NM_198549	chr1,chr1	-,+	USP33,FAM73A	-19120,578
chr22:19554160-19554588	chr22	+	19554301	19554547	True	NR_024381,NM_003504	chr22,chr22	-,+	LOC150185,CDC45	61,-86936
chr7:18535784-18537276	chr7	+	18535819	18537323	True	NM_175886,NM_178423,NM_178425,NM_001204145,NM_001204146,NM_014707,NM_058176	chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,+,+,+	PRPS1L1,HDAC9,HDAC9,HDAC9,HDAC9,HDAC9,HDAC9	-468333,-502,14,-502,-502,-502,14
chr16:3012948-3013149	chr16	+	3012955	3013099	True	NM_172229,NM_152341,NM_004203,NM_024507	chr16,chr16,chr16,chr16	+,+,-,+	KREMEN2,PAQR4,PKMYT1,KREMEN2	1117,6242,17491,1117
chr9:136398531-136398856	chr9	+	136398677	136398823	True	NM_014694,NM_001080483,NM_001145320	chr9,chr9,chr9	+,-,+	ADAMTSL2,TMEM8C,ADAMTSL2	1151,-8609,-1442
chr11:62312702-62312913	chr11	+	62312702	62312894	True	NM_001620,NM_000327,NM_024060	chr11,chr11,chr11	-,+,-	AHNAK,ROM1,AHNAK	1488,67318,1488
chr10:90723600-90724776	chr10	+	90723655	90724780	True	NM_001613,NM_000043	chr10,chr10	-,+	ACTA2,FAS	-11075,25507
chr9:139699987-139700516	chr9	+	139700090	139700444	True	NM_024718,NM_001173989,NM_001173988,NR_024580,NM_001039374	chr9,chr9,chr9,chr9,chr9	+,+,+,-,+	C9orf86,C9orf86,C9orf86,LOC100131193,KIAA1984	1929,1929,1929,2906,-9359
chr17:73851140-73851740	chr17	+	73851313	73851693	True	NM_012478,NM_001080419	chr17,chr17	-,+	WBP2,UNK	4,-70683
chr7:45129179-45129925	chr7	+	45129183	45129799	True	NM_001146334,NM_001029835	chr7,chr7	-,+	NACAD,CCM2	-690,-62001
chr1:236276735-236277117	chr1	+	236276745	236277097	True	NM_002508,NM_003272	chr1,chr1	-,+	NID1,GPR137B	-48264,28734
chr1:214723475-214724077	chr1	+	214723519	214724011	True	NM_016343,NM_005401	chr1,chr1	+,-	CENPF,PTPN14	52520,1063
chr18:3592402-3593459	chr18	+	3592443	3593407	True	NR_024101,NM_001003809	chr18,chr18	+,-	FLJ35776,DLGAP1	704,251939
chr19:49838890-49839171	chr19	+	49838970	49839210	True	NM_001040031,NM_014037,NM_001774	chr19,chr19,chr19	+,-,+	CD37,SLC6A16,CD37	-344,-10496,-344
chr15:75575418-75575663	chr15	+	75575469	75575537	True	NR_030360,NM_001145224	chr15,chr15	-,+	MIR631,GOLGA6D	70539,-338
chr15:75575418-75575663	chr15	+	72947331	72947399	False	NR_002780,NM_018652	chr15,chr15	-,+	HIGD2B,GOLGA6B	31141,-344
chr15:75575418-75575663	chr15	-	74374529	74374597	False	NM_001130136,NM_001038640	chr15,chr15	+,-	ISLR2,GOLGA6A	47117,344
chr15:75575418-75575663	chr15	+	75551192	75551260	False	NR_030360,NM_001164404	chr15,chr15	-,+	MIR631,GOLGA6C	94816,-344
chr1:234746171-234746639	chr1	+	234746190	234746592	True	NR_033927,NM_001077397,NM_182972	chr1,chr1,chr1	+,-,-	NCRNA00184,IRF2BP2,IRF2BP2	18464,-919,-919
chrX:136648943-136649223	chrX	+	136649011	136649233	True	NM_054021,NM_003413	chrX,chrX	-,+	GPR101,ZIC3	-535178,-716
chr3:134090311-134092219	chr3	+	134090476	134092108	True	NM_001042383,NM_016201	chr3,chr3	+,-	CEP63,AMOTL2	112466,1348
chr1:110307449-110308248	chr1	+	110307463	110308271	True	NM_139053,NM_000851,NM_133181,NM_024526	chr1,chr1,chr1,chr1	-,+,-,-	EPS8L3,GSTM5,EPS8L3,EPS8L3	-819,-52650,-819,-819
chr12:108077568-108078899	chr12	+	108077927	108078860	True	NM_012406,NM_007062	chr12,chr12	-,+	PRDM4,PWP1	76105,729
chr3:13009566-13011198	chr3	+	13009637	13011217	True	NM_014869,NM_012298	chr3,chr3	-,+	IQSEC1,CAND2	-677,-171517
chr15:45819648-45821057	chr15	+	45819808	45821102	True	NR_022014,NM_013309	chr15,chr15	+,-	HMGN2P46,SLC30A4	-16536,-4806
chr4:66960323-66960660	chr4	+	66960332	66960699	True	NM_182472,NR_034138	chr4,chr4	-,+	EPHA5,LOC100144602	-424679,-424704
chr17:61597599-61598423	chr17	+	61597712	61598294	True	NM_001915,NM_173092,NM_030779	chr17,chr17,chr17	-,+,+	CYB561,KCNH6,KCNH6	-73990,2400,2400
chr22:17488351-17488773	chr22	+	17488505	17488739	True	NR_015352,NM_001037814	chr22,chr22	+,-	CECR7,GAB4	28720,423
chr5:136834331-136834571	chr5	+	136834425	136834619	True	NM_004598,NR_002713	chr5,chr5	-,+	SPOCK1,NPY6R	449,302262
chr19:44506827-44507050	chr19	+	44506844	44507050	True	NM_006300,NM_003425	chr19,chr19	+,-	ZNF230,ZNF45	26,-67433
chrX:153208462-153209086	chrX	+	153208483	153209113	True	NM_003491,NM_002910,NM_003492	chrX,chrX,chrX	-,-,+	NAA10,RENBP,TMEM187	-8015,1169,28877
chr5:140853968-140854190	chr5	+	140854041	140854244	True	NM_002588,NM_032402,NM_032403,NM_001079812	chr5,chr5,chr5,chr5	+,+,+,-	PCDHGC3,PCDHGC3,PCDHGC3,DIAPH1	1324,1324,1324,144433
chr2:106049932-106050992	chr2	+	106049950	106050732	True	NM_024093,NM_201557	chr2,chr2	+,-	C2orf49,FHL2	-95988,4549
chr21:46977685-46978346	chr21	+	46977696	46978136	True	NM_130444,NM_194255	chr21,chr21	+,-	COL18A1,SLC19A1	-102323,-15311
chr15:53090830-53091208	chr15	+	53090839	53091237	True	NM_004498,NM_002748	chr15,chr15	-,+	ONECUT1,MAPK6	-8630,-779479
chr5:10571404-10572046	chr5	+	10571663	10572000	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-7279,189446
chr1:21769002-21770545	chr1	+	21769055	21770035	True	NM_032264,NM_001113348	chr1,chr1	+,-	NBPF3,ECE1	-2486,-97021
chr8:79712827-79713243	chr8	+	79712867	79713291	True	NM_001199886,NM_001199887,NM_016010,NM_000880,NM_001199888	chr8,chr8,chr8,chr8,chr8	-,-,+,-,-	IL7,IL7,FAM164A,IL7,IL7	4517,4517,-134650,4517,4517
chr22:19420608-19421444	chr22	+	19420758	19421283	True	NM_003776,NM_003325	chr22,chr22	+,-	MRPL40,HIRA	-781,-1539
chr20:42579186-42579935	chr20	+	42579321	42579907	True	NM_001098798,NM_176791	chr20,chr20	+,-	TOX2,GTSF1L	-4836,-223679
chr20:33758556-33759385	chr20	+	33758555	33759397	True	NM_006404,NR_026728	chr20,chr20	+,-	PROCR,EDEM2	376,-23394
chr6:138192204-138192630	chr6	+	138192273	138192671	True	NM_006290,NM_022121	chr6,chr6	+,-	TNFAIP3,PERP	-3743,236039
chr22:19475289-19476036	chr22	+	19475571	19476035	True	NM_005659,NM_001178010,NM_001178011,NM_001035247,NM_003504	chr22,chr22,chr22,chr22,chr22	-,+,+,-,+	UFD1L,CDC45,CDC45,UFD1L,CDC45	-8833,-8217,-8217,-8833,-8215
chr19:918324-918615	chr19	+	918536	918664	True	NM_138774,NM_005224,NM_032551	chr19,chr19,chr19	-,+,+	C19orf22,ARID3A,KISS1R	-5311,7372,-1245
chrX:16143047-16144085	chrX	+	16143332	16144064	True	NM_005314,NM_003916	chrX,chrX	+,-	GRPR,AP1S2	-1972,-270232
chr9:20622062-20622265	chr9	+	20622101	20622177	True	NM_004529,NM_017794	chr9,chr9	-,+	MLLT3,KIAA1797	387,36131
chr6:14964398-14964881	chr6	+	14964752	14964896	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	281630,698443
chr20:1600436-1601702	chr20	+	1600702	1601561	True	NM_001135844,NM_001083910,NM_006065,NM_001040022	chr20,chr20,chr20,chr20	-,-,-,+	SIRPB1,SIRPB1,SIRPB1,SIRPA	-13,-13,-13,273251
chr1:28911622-28912315	chr1	+	28911790	28912318	True	NR_024127,NR_002987,NR_003077,NM_152304,NR_002976,NM_001193532,NR_003035	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,+,-	SNHG12,SNORA61,SNORD99,RAB42,SNORA44,RAB42,SNORA16A	-3424,-5385,-6456,6393,-4766,6688,-4225
chrX:52532318-52532989	chrX	+	52532319	52532922	True	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,-,-,-,-,-,-,-,-,-,-	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	278,222,222,431,222,222,222,278,431,278,431,431,431,278,278
chrX:52532318-52532989	chrX	-	52239190	52239793	False	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,+,+,+,+,+,+,+,+,+,+	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	-278,-222,-222,-431,-222,-222,-222,-278,-431,-278,-431,-431,-431,-278,-278
chrX:52532318-52532989	chrX	+	52259379	52259982	False	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,-,-,-,-,-,-,-,-,-,-	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	278,222,222,431,222,222,222,278,431,278,431,431,431,278,278
chrX:52532318-52532989	chrX	-	52512141	52512744	False	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,+,+,+,+,+,+,+,+,+,+	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	-278,-222,-222,-431,-222,-222,-222,-278,-431,-278,-431,-431,-431,-278,-278
chrX:52532318-52532989	chrX	+	52545213	52545816	False	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,-,-,-,-,-,-,-,-,-,-	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	278,222,222,431,222,222,222,278,431,278,431,431,431,278,278
chr9:94877668-94878053	chr9	+	94877679	94877968	True	NR_015444,NM_006415,NM_178324	chr9,chr9,chr9	+,-,-	LOC100128076,SPTLC1,SPTLC1	17147,1,1
chr1:154379468-154380307	chr1	+	154379506	154380300	True	NM_001010846,NM_181359,NM_000565	chr1,chr1,chr1	-,+,+	SHE,IL6R,IL6R	94276,-1890,-1890
chr20:44075378-44076161	chr20	+	44075377	44076208	True	NM_006103,NM_014477,NM_006652	chr20,chr20,chr20	+,-,-	WFDC2,TP53TG5,SPINT3	22185,-68420,68106
chr19:19031670-19032501	chr19	+	19031983	19032511	True	NR_033677,NM_199444,NM_199442,NM_019070,NM_007263	chr19,chr19,chr19,chr19,chr19	+,-,-,+,-	DDX49,COPE,COPE,DDX49,COPE	-1550,-1784,-1784,-1550,-1784
chr2:220069013-220070107	chr2	+	220069232	220070151	True	NM_138802,NM_005689	chr2,chr2	+,-	ZFAND2B,ABCB6	1386,13613
chr17:5324641-5325264	chr17	+	5324730	5325099	True	NR_027685,NM_001160243,NM_001160244,NR_027681,NM_001160246,NR_027680,NM_001033002,NM_002532,NR_027682,NR_027684,NR_027683,NM_001160266,NM_001160267,NR_027678,NR_027679	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,+,+,-,+,+,+,+,+,+,+	RPAIN,RPAIN,RPAIN,RPAIN,RPAIN,RPAIN,RPAIN,NUP88,RPAIN,RPAIN,RPAIN,RPAIN,RPAIN,RPAIN,RPAIN	-1820,-1820,-1820,-1820,-1820,-1820,-1820,-1671,-1820,-1820,-1820,-1820,-1820,-1820,-1820
chr10:25010736-25011648	chr10	+	25010742	25011425	True	NM_020824,NM_024838	chr10,chr10	-,+	ARHGAP21,THNSL1	1222,294082
chr16:4001543-4003067	chr16	+	4001702	4003085	True	NM_005223,NM_004380	chr16,chr16	+,-	DNASE1,CREBBP	-298813,-71581
chr19:49375953-49376424	chr19	+	49376117	49376445	True	NM_020904,NM_014330,NM_001161354	chr19,chr19,chr19	-,+,-	PLEKHA4,PPP1R15A,PLEKHA4	-4233,-519,-4233
chr11:120193155-120193902	chr11	+	120193198	120193950	True	NM_001198674,NM_001198675,NM_001198672,NM_001198673,NM_001198670,NM_001198671,NM_012101,NM_174926	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,+,-,+	TMEM136,TMEM136,TMEM136,TMEM136,TMEM136,TMEM136,TRIM29,TMEM136	1887,1887,1887,1887,1887,1887,-184335,1887
chrX:110864457-110865436	chrX	+	110864522	110865461	True	NM_178153,NM_001039210	chrX,chrX	-,+	DCX,ALG13	-209062,58884
chr3:15106913-15107503	chr3	+	15107054	15107262	True	NM_022497,NM_003298	chr3,chr3	-,+	MRPS25,NR2C2	-238,-117876
chr5:76154319-76155325	chr5	+	76154370	76155313	True	NR_003014,NM_130772	chr5,chr5	-,+	SNORA47,S100Z	221134,-8595
chr11:63705740-63706111	chr11	+	63705749	63706105	True	NM_024771,NM_173587	chr11,chr11	+,-	NAA40,RCOR2	336,-21433
chr2:103375406-103376380	chr2	+	103375405	103376422	True	NM_144632,NM_032718	chr2,chr2	+,-	TMEM182,MFSD9	2067,-22068
chr9:139608524-139609117	chr9	+	139608809	139609151	True	NM_152421,NR_002975	chr9,chr9	+,-	FAM69B,SNORA43	-1836,11588
chr6:36241087-36241316	chr6	+	36241113	36241359	True	NM_001145717,NM_001010903	chr6,chr6	+,-	PNPLA1,C6orf222	-2929,63353
chrY:9175266-9175496	chrY	+	9175322	9175384	True	NR_001546,NM_001164471	chrY,chrY	-,+	TTTY20,TSPY4	-2881,20067
chrY:9175266-9175496	chrY	+	9325125	9325187	False	NR_001553,NM_003308	chrY,chrY	-,+	FAM197Y2P,TSPY1	-2862,-20612
chrY:9175266-9175496	chrY	+	9345408	9345470	False	NR_001553,NM_001077697	chrY,chrY	-,+	FAM197Y2P,TSPY3	17457,20018
chr7:47579464-47581266	chr7	+	47579696	47581266	True	NM_001123065,NM_022748	chr7,chr7	+,-	C7orf65,TNS3	113575,40527
chr12:125478949-125479156	chr12	+	125479001	125479105	True	NM_032656,NM_080626	chr12,chr12	-,+	DHX37,BRI3BP	-5334,-859
chrX:147020333-147021534	chrX	+	147020424	147020906	True	NR_033700,NR_024503	chrX,chrX	+,-	FMR1,FMR1-AS1	-27008,-16748
chr3:113213416-113214267	chr3	+	113213737	113214078	True	NM_144718,NM_017699	chr3,chr3	-,+	SPICE1,SIDT1	20006,37139
chr3:63850749-63851287	chr3	+	63850749	63851177	True	NM_000333,NM_025075	chr3,chr3	+,-	ATXN7,THOC7	-570,-1152
chr5:44378692-44379616	chr5	+	44378985	44379656	True	NM_004465,NM_016640	chr5,chr5	-,+	FGF10,MRPS30	9183,429370
chr7:37953973-37954389	chr7	+	37953980	37954138	True	NM_003014,NM_017549	chr7,chr7	-,+	SFRP4,EPDR1	2437,6024
chr2:198379050-198379254	chr2	+	198379054	198379306	True	NM_199482,NM_015387,NM_001100819,NM_199440,NM_001204094	chr2,chr2,chr2,chr2,chr2	+,+,+,-,+	MOBKL3,MOBKL3,MOBKL3,HSPD1,MOBKL3	988,1460,1460,-14056,1715
chr18:33640318-33642000	chr18	+	33640489	33641547	True	NM_018170,NM_018255	chr18,chr18	-,+	RPRD1A,ELP2	5883,68339
chrX:69392594-69394398	chrX	+	69392710	69394303	True	NM_002565,NM_198512	chrX,chrX	-,+	P2RY4,DGAT2L6	85402,3032
chr2:173631134-173632065	chr2	+	173631295	173631868	True	NR_026995,NM_007023	chr2,chr2	-,+	LOC91149,RAPGEF4	-30361,-30829
chr12:96338834-96340601	chr12	+	96338938	96340228	True	NM_152435,NM_182496	chr12,chr12	+,-	AMDHD1,CCDC38	-1931,-2510
chr11:314084-314389	chr11	+	314102	314358	True	NM_006435,NM_021034,NM_003641	chr11,chr11,chr11	+,-,+	IFITM2,IFITM3,IFITM1	-6046,6606,-162
chr9:35096662-35097113	chr9	+	35096762	35096976	True	NM_032634,NM_203299,NM_152850,NM_013442,NM_001201484	chr9,chr9,chr9,chr9,chr9	-,+,-,-,-	PIGO,C9orf131,PIGO,STOML2,PIGO	-216,-54590,-164,6236,-216
chr17:13985615-13986331	chr17	+	13985682	13986300	True	NM_001007530,NM_001303	chr17,chr17	-,+	CDRT15,COX10	153900,-13014
chr19:12595412-12595653	chr19	+	12595455	12595637	True	NM_152601,NM_153358	chr19,chr19	-,+	ZNF709,ZNF791	45,126094
chr8:104337545-104339542	chr8	+	104337569	104339520	True	NM_003506,NM_030780	chr8,chr8	+,-	FZD6,SLC25A32	-26569,88008
chr16:30659934-30660697	chr16	+	30660098	30660498	True	NM_138447,NM_024031	chr16,chr16	-,+	ZNF689,PRR14	-38416,1742
chr4:113508418-113510122	chr4	+	113508430	113509976	True	NM_018392,NM_016648	chr4,chr4	-,+	C4orf21,LARP7	48238,48143
chr22:20068639-20069670	chr22	+	20068650	20069522	True	NR_037412,NM_001190326,NM_022727,NM_022720,NR_031706	chr22,chr22,chr22,chr22,chr22	+,+,-,+,+	MIR3618,DGCR8,TRMT2A,DGCR8,MIR1306	3746,-946,35296,-946,4058
chr12:57642320-57642833	chr12	+	57642505	57642851	True	NM_145064,NM_020142,NM_001166357	chr12,chr12,chr12	-,-,+	STAC3,NDUFA4L2,SHMT2	2168,-8030,-18415
chr19:34919791-34920631	chr19	+	34919798	34920288	True	NR_027620,NM_005499	chr19,chr19	-,+	LOC643719,UBA2	148358,-581
chrX:45051690-45053173	chrX	+	45051898	45053059	True	NM_024689,NM_176819,NM_021140	chrX,chrX,chrX	-,-,+	CXorf36,CXorf36,KDM6A	7138,7138,-319526
chr12:50366469-50367322	chr12	+	50366475	50367367	True	NM_001126103,NM_001652	chr12,chr12	-,+	RACGAP1,AQP6	51990,-10
chr14:105485446-105486833	chr14	+	105485520	105486744	True	NM_017955,NM_174891,NM_145701	chr14,chr14,chr14	-,+,-	CDCA4,C14orf79,CDCA4	731,-32955,731
chr20:30556446-30556649	chr20	+	30556522	30556672	True	NM_030815,NM_001011718	chr20,chr20	-,+	PDRG1,XKR7	-16639,-768
chr9:99689156-99691111	chr9	+	99689450	99691021	True	NM_001170741,NM_001045477,NM_001001662	chr9,chr9,chr9	+,+,-	FAM22G,FAM22G,ZNF782	264,264,-73061
chr9:99689156-99691111	chr9	-	97091190	97092670	False	NM_017561,NR_033937	chr9,chr9	-,+	FAM22F,LOC100132077	-264,2087
chr6:123881374-123883200	chr6	+	123881506	123883006	True	NM_001040214,NM_006073	chr6,chr6	+,-	NKAIN2,TRDN	242062,74986
chr2:162270555-162271119	chr2	+	162270611	162271079	True	NM_006593,NM_001935	chr2,chr2	+,-	TBR1,DPP4	1540,660023
chr8:1918845-1919202	chr8	+	1918952	1919154	True	NR_033895,NM_014867	chr8,chr8	-,+	LOC286083,KBTBD11	-668125,2889
chr4:183242952-183244221	chr4	+	183243432	183244004	True	NM_001080477,NR_027107	chr4,chr4	+,-	ODZ3,MGC45800	1132,-177764
chr2:135022609-135024003	chr2	+	135022608	135023471	True	NM_002410,NM_030923	chr2,chr2	+,-	MGAT5,TMEM163	-10829,453151
chr17:36451621-36452431	chr17	+	36451930	36452476	True	NR_036750,NM_032351	chr17,chr17	-,+	LOC440434,MRPL45	-38674,521
chr17:36451621-36452431	chr17	-	45570473	45571015	False	NR_033934,NM_006310	chr17,chr17	-,+	MRPL45P2,NPEPPS	-487,37428
chr17:18646100-18647634	chr17	+	18646307	18647565	True	NM_001145045,NM_031456	chr17,chr17	-,+	ZNF286B,FBXW10	-60735,-240
chr17:18908162-18908404	chr17	+	18908226	18908450	True	NM_001039999,NM_152351	chr17,chr17	-,+	FAM83G,SLC5A10	-166,-52799
chr1:203316891-203317593	chr1	+	203317017	203317529	True	NM_002023,NM_006763	chr1,chr1	-,+	FMOD,BTG2	2810,-42404
chr16:21170244-21170710	chr16	+	21170338	21170717	True	NM_020422,NM_017539	chr16,chr16	+,-	TMEM159,DNAH3	-477,95
chr16:30021856-30022196	chr16	+	30021915	30021983	True	NM_003586,NM_001109659	chr16,chr16	-,+	DOC2A,C16orf92	468,12671
chr7:97736851-97737099	chr7	+	97736861	97737104	True	NM_006188,NM_014916	chr7,chr7	-,+	OCM2,LMTK2	-117445,-715
chr4:128705529-128705900	chr4	+	128705577	128705949	True	NM_014278,NM_152778	chr4,chr4	+,-	HSPA4L,MFSD8	-2184,181240
chr12:110505931-110507135	chr12	+	110506153	110506948	True	NM_207435,NM_031473	chr12,chr12	-,+	C12orf76,IFT81	-653,55191
chr1:155712094-155713279	chr1	+	155712096	155712525	True	NM_139118,NR_024117	chr1,chr1	-,+	YY1AP1,MSTO2P	-53273,3083
chr1:155712094-155713279	chr1	+	155574020	155574075	False	NM_018116,NM_018489	chr1,chr1	+,-	MSTO1,ASH1L	5931,-41696
chr14:102418146-102418596	chr14	+	102418585	102418645	True	NM_001376,NM_005348	chr14,chr14	+,-	DYNC1H1,HSP90AA1	12219,134917
chr12:27173498-27174938	chr12	+	27173615	27174698	True	NM_004264,NM_016551	chr12,chr12	+,-	MED21,TM7SF3	784,-6276
chr15:74729238-74729978	chr15	+	74729251	74729824	True	NM_001146029,NM_006465,NM_001146030,NM_003612	chr15,chr15,chr15,chr15	-,+,-,-	SEMA7A,ARID3B,SEMA7A,SEMA7A	-2952,103723,-3250,-2952
chr11:637355-637600	chr11	+	637455	637621	True	NM_000797,NM_021920	chr11,chr11	+,-	DRD4,SCT	-201,-10282
chr12:53899827-53900625	chr12	+	53899990	53900564	True	NM_003717,NM_004178,NM_134323,NM_001193511,NM_134324,NM_006301	chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,-,+,-	NPFF,TARBP2,TARBP2,MAP3K12,TARBP2,MAP3K12	908,-5336,-5336,-6546,-4664,-6546
chr11:46369701-46370205	chr11	+	46369724	46370200	True	NM_001199266,NM_001199267,NM_000741,NM_001199268,NM_201533,NM_003646	chr11,chr11,chr11,chr11,chr11,chr11	+,+,-,+,+,+	DGKZ,DGKZ,CHRM4,DGKZ,DGKZ,DGKZ	-819,-819,37957,-819,-2958,-819
chr18:19179730-19180085	chr18	+	19179764	19179937	True	NM_006938,NM_052911	chr18,chr18	+,-	SNRPD1,ESCO1	12322,806
chr2:47598557-47599496	chr2	+	47598572	47599473	True	NR_030286,NM_001743,NM_002354	chr2,chr2,chr2	+,-,+	MIR559,CALM2,EPCAM	5340,-194832,-2336
chr1:10509503-10510293	chr1	+	10509697	10510194	True	NM_004401,NM_001302	chr1,chr1	-,+	DFFA,CORT	22470,28
chr19:51336471-51337185	chr19	+	51336492	51337222	True	NM_138564,NM_001030050,NM_002257,NM_138563,NM_017509	chr19,chr19,chr19,chr19,chr19	-,+,-,-,-	KLK15,KLK3,KLK1,KLK15,KLK15	-1713,20948,-9449,-1713,-1713
chr19:53070498-53070899	chr19	+	53070520	53070671	True	NM_001172655,NM_018260,NM_001105549	chr19,chr19,chr19	+,+,-	ZNF701,ZNF701,ZNF83	3245,2854,71024
chr12:89915173-89916663	chr12	+	89915218	89916689	True	NR_037660,NM_172240,NM_001199781,NR_037659,NM_001199782,NR_028138,NM_003774,NM_001199777	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,-,-,-,-,+,-,-	POC1B,POC1B,POC1B-GALNT4,POC1B,POC1B-GALNT4,LOC338758,GALNT4,POC1B	2705,3400,3400,3400,3400,186042,1944,2705
chr9:126117353-126118102	chr9	+	126117427	126117681	True	NM_173689,NR_030332	chr9,chr9	+,-	CRB2,MIR601	766,47251
chr11:64948377-64948714	chr11	+	64948463	64948597	True	NM_172230,NM_005186,NM_001198870,NM_001198869,NM_001198868	chr11,chr11,chr11,chr11,chr11	-,+,+,+,+	SYVN1,CAPN1,CAPN1,CAPN1,CAPN1	-46460,706,706,552,88
chr7:27157872-27158617	chr7	+	27157942	27158637	True	NM_030661,NM_153631,NR_002795	chr7,chr7,chr7	-,-,+	HOXA3,HOXA3,HOXA11-AS1	627,8052,66389
chr1:149222963-149223527	chr1	+	149223117	149223575	True	NM_001024599,NR_027002	chr1,chr1	-,+	HIST2H2BF,LOC388692	175704,55900
chr19:44644292-44644595	chr19	+	44644362	44644437	True	NM_001144824,NM_006630,NR_033341	chr19,chr19,chr19	+,+,-	ZNF234,ZNF234,LOC100379224	1272,1272,-27026
chrX:13062474-13062763	chrX	+	13062537	13062761	True	NM_021109,NM_174901	chrX,chrX	+,-	TMSB4X,FAM9C	-69362,206
chr9:45356811-45357072	chr9	+	45356964	45357030	True	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-366779,-1726234
chrX:10579680-10581399	chrX	+	10579871	10581291	True	NM_000381,NM_033289,NM_001830	chrX,chrX,chrX	-,-,+	MID1,MID1,CLCN4	7441,7441,-454950
chr8:95203257-95203975	chr8	+	95203286	95204024	True	NM_004063,NM_001161778	chr8,chr8	-,+	CDH17,PDP1	16841,-273345
chr8:56691800-56693576	chr8	+	56691914	56693587	True	NM_152417,NM_024831	chr8,chr8	-,+	TMEM68,TGS1	-6029,-6174
chr16:57490501-57490923	chr16	+	57490531	57490921	True	NM_020313,NM_020312,NM_032940	chr16,chr16,chr16	-,+,+	CIAPIN1,COQ9,POLR2C	-9162,-9245,5629
chr17:27669665-27669999	chr17	+	27669685	27669890	True	NM_020791,NM_020772	chr17,chr17	+,-	TAOK1,NUFIP2	48052,-48519
chr19:28280819-28282578	chr19	+	28281392	28282343	True	NR_027318,NR_027301	chr19,chr19	+,-	LOC148145,LOC148189	1173694,2561
chr8:57124922-57125393	chr8	+	57125038	57125403	True	NM_001011669,NM_001011668,NM_001011667,NM_001011670,NM_001011671,NM_024300,NM_001114634,NM_001114635,NM_002655	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	+,+,+,+,+,+,-,-,-	CHCHD7,CHCHD7,CHCHD7,CHCHD7,CHCHD7,CHCHD7,PLAG1,PLAG1,PLAG1	-774,-774,-774,-774,-774,-774,-1179,-1179,-1179
chr1:201853014-201853246	chr1	+	201853034	201853259	True	NM_198149,NM_012134,NR_030775	chr1,chr1,chr1	+,-,+	SHISA4,LMOD1,SHISA4	4545,62507,4537
chrX:13839806-13841136	chrX	+	13839999	13841075	True	NM_001001996,NM_001001995,NM_003611,NM_005278	chrX,chrX,chrX,chrX	-,-,+,-	GPM6B,GPM6B,OFD1,GPM6B	-4685,-4685,-87221,-4685
chr19:51981796-51982493	chr19	+	51981936	51982486	True	NM_001080405,NM_014442	chr19,chr19	+,-	CEACAM18,SIGLEC8	-2149,-20228
chr6:42160213-42161422	chr6	+	42160635	42161417	True	NM_000409,NM_002098	chr6,chr6	+,-	GUCA1A,GUCA1B	-37549,1327
chr2:172015925-172016314	chr2	+	172016002	172016222	True	NM_012290,NM_015530	chr2,chr2	-,+	TLK1,GORASP2	1238,-231023
chr10:32735133-32736684	chr10	+	32735197	32736342	True	NM_025209,NM_145023,NM_001026383	chr10,chr10,chr10	-,+,+	EPC1,CCDC7,CCDC7	-99084,-207,-207
chr17:74446995-74447934	chr17	+	74447049	74447976	True	NM_022066,NM_001166579	chr17,chr17	-,+	UBE2O,AANAT	1362,1456
chr1:169075639-169075977	chr1	+	169075741	169076015	True	NM_001677,NM_013330	chr1,chr1	+,-	ATP1B1,NME7	-5,261221
chr19:12403843-12404727	chr19	+	12404097	12404623	True	NM_003437,NM_001164276,NM_016264	chr19,chr19,chr19	+,-,-	ZNF136,ZNF44,ZNF44	-130276,1141,1141
chrX:48688189-48689569	chrX	+	48688302	48689410	True	NM_181532,NM_013271	chrX,chrX	+,-	ERAS,PCSK1N	-1070,4600
chr6:26521716-26521946	chr6	+	26521718	26521976	True	NR_026790,NM_024639	chr6,chr6	+,-	HCG11,ZNF322A	-43,138037
chr14:24612611-24612868	chr14	+	24612624	24612910	True	NM_017999,NM_016049,NM_006263,NM_176783,NM_002818	chr14,chr14,chr14,chr14,chr14	+,-,+,+,-	RNF31,FAM158A,PSME1,PSME1,PSME2	3748,-1827,-7298,-7298,2995
chr4:78081043-78081974	chr4	+	78081056	78082025	True	NM_004354,NM_006835	chr4,chr4	+,-	CCNG2,CCNI	-2750,-83931
chr5:145894086-145894832	chr5	+	145894138	145894830	True	NM_006706,NM_194251	chr5,chr5	+,-	TCERG1,GPR151	-67329,896
chr5:157412110-157413280	chr5	+	157412119	157413178	True	NM_014666,NM_173491	chr5,chr5	-,+	CLINT1,LSM11	-125936,-241417
chr22:50217631-50218309	chr22	+	50217683	50218091	True	NM_014838,NM_014577	chr22,chr22	+,-	ZBED4,BRD1	29405,411
chr11:95025564-95026691	chr11	+	95025572	95026587	True	NM_144665,NM_015036	chr11,chr11	-,+	SESN3,ENDOD1	-61326,-202649
chr2:191042283-191043240	chr2	+	191042344	191043104	True	NM_001042519,NM_005259,NM_032321	chr2,chr2,chr2	+,-,+	C2orf88,MSTN,C2orf88	2484,-114889,2576
chr14:24802517-24802937	chr14	+	24802734	24802913	True	NM_139247,NM_181657,NM_001198592,NM_001198568,NM_006871	chr14,chr14,chr14,chr14,chr14	-,+,-,-,-	ADCY4,LTB4R,ADCY4,ADCY4,RIPK3	1415,-20472,1415,1415,6380
chr9:74980993-74981291	chr9	+	74981028	74981229	True	NM_138691,NM_001102420,NM_001102421,NM_006007	chr9,chr9,chr9,chr9	+,-,-,-	TMC1,ZFAND5,ZFAND5,ZFAND5	155487,-865,-865,-865
chr18:67067259-67067582	chr18	+	67067259	67067552	True	NM_152721,NM_006566	chr18,chr18	+,-	DOK6,CD226	731,556730
chr15:34628781-34629198	chr15	+	34628789	34629094	True	NM_133647,NM_001042496,NM_001042497,NM_001042494,NM_001042495,NM_018648,NM_175741	chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,-,-,-,-,+	SLC12A6,SLC12A6,SLC12A6,SLC12A6,SLC12A6,NOP10,C15orf55	13,929,13,929,1233,6330,8971
chr15:29209576-29210048	chr15	+	29209611	29210049	True	NM_001130414,NM_138704,NM_005503	chr15,chr15,chr15	+,-,+	APBA2,NDNL2,APBA2	3790,352026,3790
chr10:98508909-98509717	chr10	+	98508925	98509595	True	NM_152309,NM_001170765	chr10,chr10	-,+	PIK3AP1,LCOR	-28646,82421
chr4:158064550-158065080	chr4	+	158064582	158064994	True	NR_036641,NM_001166060	chr4,chr4	-,+	PDGFC,GLRB	-172036,-67079
chr15:92939050-92939279	chr15	+	92939056	92939244	True	NM_006011,NR_021493	chr15,chr15	+,-	ST8SIA2,LOC100144604	-1967,176299
chr11:66059925-66061717	chr11	+	66060007	66061573	True	NM_020470,NM_153266	chr11,chr11	-,+	YIF1A,TMEM151A	-3369,-685
chr15:34823557-34823811	chr15	+	34823604	34823801	True	NM_001023567,NM_175741,NR_036050,NR_036261	chr15,chr15,chr15,chr15	-,+,-,-	GOLGA8B,C15orf55,MIR1233-1,MIR1233-2	4472,-185589,-3032,-3032
chr15:34823557-34823811	chr15	+	34677383	34677580	False	NM_175741,NR_036050,NM_181077,NR_036261	chr15,chr15,chr15,chr15	+,-,-,-	C15orf55,MIR1233-1,GOLGA8A,MIR1233-2	-39368,-3032,4472,-3032
chr20:21375216-21376364	chr20	+	21375320	21376366	True	NM_012255,NM_033176	chr20,chr20	+,-	XRN2,NKX2-4	-91442,1731
chr11:107477415-107478674	chr11	+	107477767	107478682	True	NM_138775,NR_028328	chr11,chr11	-,+	ALKBH8,LOC643923	-41306,-15354
chr3:186914718-186915477	chr3	+	186914734	186915432	True	NM_052969,NM_153708	chr3,chr3	-,+	RPL39L,RTP1	-57471,-61
chr1:153230905-153232480	chr1	+	153230979	153232167	True	NM_052891,NM_000427	chr1,chr1	-,+	PGLYRP3,LOR	51077,11
chr7:128001117-128001345	chr7	+	128001182	128001290	True	NM_001114726,NM_001098786,NM_001174164	chr7,chr7,chr7	-,+,-	PRRT4,C7orf68,PRRT4	499,94593,499
chr10:32350030-32351720	chr10	+	32350268	32351610	True	NM_004521,NM_001026383	chr10,chr10	-,+	KIF5B,CCDC7	-4897,383430
chr12:48290633-48291248	chr12	+	48290815	48291295	True	NM_001143841,NM_000376,NM_001017536,NM_001017535	chr12,chr12,chr12,chr12	+,-,-,-	TMEM106C,VDR,VDR,VDR	66034,7569,7569,7569
chr6:43208563-43210023	chr6	+	43208810	43209590	True	NM_032538,NM_199184	chr6,chr6	+,-	TTBK1,C6orf108	1631,-11599
chr17:74099401-74099825	chr17	+	74099432	74099764	True	NM_001013839,NM_015219,NM_001145297,NM_180990,NR_028133,NM_001145298,NM_001145299	chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,+,-,-,-	EXOC7,EXOC7,EXOC7,ZACN,EXOC7,EXOC7,EXOC7	154,154,154,-24220,-62,154,154
chr15:43398579-43400512	chr15	+	43398772	43400165	True	NM_024956,NM_174916	chr15,chr15	+,-	TMEM62,UBR1	25556,-486
chr1:20834770-20835688	chr1	+	20834901	20835488	True	NM_024544,NM_207334	chr1,chr1	-,+	MUL1,FAM43B	-227,43443
chr11:65338968-65339958	chr11	+	65339039	65339955	True	NM_001099409,NM_006396,NM_152832,NM_021070,NM_001098785,NM_001098784	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,-,+,+	EHBP1L1,SSSCA1,FAM89B,LTBP3,FAM89B,FAM89B	3553,-1147,56,-13340,56,56
chr12:54957014-54958135	chr12	+	54957050	54958034	True	NM_006741,NM_001165975	chr12,chr12	-,+	PPP1R1A,PDE1B	24459,-2002
chr6:6619562-6620739	chr6	+	6619655	6620767	True	NM_004271,NR_026970	chr6,chr6	+,-	LY86,LY86-AS1	-30784,2342
chr8:53322565-53323518	chr8	+	53322745	53323269	True	NM_014682,NM_005285	chr8,chr8	-,+	ST18,NPBWR1	-306,529198
chrX:47487175-47487597	chrX	+	47487261	47487639	True	NM_001145252,NM_133499,NM_006950,NM_002621,NR_028119	chrX,chrX,chrX,chrX,chrX	-,-,-,-,+	CFP,SYN1,SYN1,CFP,LOC100133957	1780,-8005,-8005,2115,30592
chr11:441454-441674	chr11	+	441572	441716	True	NM_030783,NM_001012302	chr11,chr11	+,-	PTDSS2,ANO9	8563,345
chr1:43765535-43765963	chr1	+	43765611	43765959	True	NM_005424,NM_001164829	chr1,chr1	+,-	TIE1,C1orf210	704,-14323
chr1:246952595-246954369	chr1	+	246952674	246954362	True	NR_015422,NM_015446	chr1,chr1	+,-	LOC149134,AHCTF1	190,140414
chr15:66583443-66585364	chr15	+	66583940	66585136	True	NM_133375,NM_001143688,NM_032445	chr15,chr15,chr15	+,+,-	DIS3L,DIS3L,MEGF11	496,783,-37865
chr1:59041535-59041820	chr1	+	59041675	59041827	True	NM_002353,NR_034014	chr1,chr1	-,+	TACSTD2,LOC100131060	1389,208995
chr10:54526806-54528358	chr10	+	54526893	54528336	True	NM_012242,NM_000242	chr10,chr10	+,-	DKK1,MBL2	-452903,3179
chr16:89686987-89687206	chr16	+	89687000	89687194	True	NM_001083314,NM_001128141,NM_004413	chr16,chr16,chr16	-,+,+	CHMP1A,DPEP1,DPEP1	36985,-7335,-51
chr16:70103027-70103329	chr16	+	70103049	70103111	True	NR_036265,NR_003610	chr16,chr16	+,-	MIR1972-2,PDXDC2P	-38851,-3198
chr16:67679218-67679502	chr16	+	67679369	67679493	True	NM_001013838,NM_001082486	chr16,chr16	+,-	RLTPR,ACD	-390,15275
chr2:11604072-11604846	chr2	+	11604181	11604842	True	NM_014668,NR_003094,NR_003095,NR_003092,NR_003093,NM_198256	chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-	GREB1,E2F6,E2F6,E2F6,E2F6,E2F6	69399,1505,1505,1505,1505,1505
chr19:13988517-13988881	chr19	+	13988516	13988735	True	NM_001098622,NR_030179,NR_029613,NM_024323	chr19,chr19,chr19,chr19	+,+,+,-	NANOS3,MIR181D,MIR181C,C19orf57	-617,-2878,-3054,28229
chr8:29945342-29945621	chr8	+	29945348	29945500	True	NM_001128208,NM_016127,NM_015344	chr8,chr8,chr8	+,-,+	LEPROTL1,TMEM66,LEPROTL1	7421,-4699,7421
chr6:167648913-167649659	chr6	+	167648933	167649363	True	NM_005299,NM_001143947	chr6,chr6	-,+	GPR31,UNC93A	-77614,55439
chr19:38809347-38810413	chr19	+	38809351	38810289	True	NM_001145462,NM_001145461,NM_001039671,NM_001145463,NM_001039673,NM_001039672,NM_033557,NM_004823	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,+	YIF1B,YIF1B,YIF1B,YIF1B,YIF1B,YIF1B,YIF1B,KCNK6	-2906,-2906,-2906,-2745,-2745,-2745,-8842,194
chr22:19843137-19843416	chr22	+	19843195	19843449	True	NM_024627,NM_000754,NM_053004	chr22,chr22,chr22	-,+,-	C22orf29,COMT,GNB1L	-824,85813,-733
chr14:81687752-81688254	chr14	+	81687760	81688282	True	NM_201595,NM_015859,NM_000369	chr14,chr14,chr14	-,-,+	GTF2A1,GTF2A1,TSHR	-185,-466,-265942
chr1:185013194-185013487	chr1	+	185013266	185013508	True	NM_052966,NM_007212	chr1,chr1	-,+	FAM129A,RNF2	-69584,1042
chr4:47915699-47916065	chr4	+	47915707	47915947	True	NM_152995,NM_207330	chr4,chr4	-,+	NFXL1,NIPAL1	736,102843
chr17:27039410-27039714	chr17	+	27039482	27039728	True	NR_024575,NR_024579,NM_000984,NM_152465,NM_001144943,NR_000013,NR_000010,NM_001142625,NM_001144942,NM_001142624,NM_031934	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,-,-,+,+,-,-,-,-	RAB34,RAB34,RPL23A,PROCA1,RAB34,SNORD42B,SNORD4A,RAB34,RAB34,RAB34,RAB34	5573,5573,7271,-610,5608,7839,9871,5608,5230,5608,5230
chr19:54608869-54609343	chr19	+	54608872	54609322	True	NM_015629,NM_133169,NM_133168,NM_004542,NM_206818,NM_013342,NM_130771	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,-,+,-,-,-	PRPF31,OSCAR,OSCAR,NDUFA3,OSCAR,TFPT,OSCAR	9467,-4724,-4724,-2764,-4724,9783,-4724
chr20:30561821-30563018	chr20	+	30562072	30562992	True	NM_030815,NM_001011718	chr20,chr20	-,+	PDRG1,XKR7	-22189,-6319
chr2:70122343-70122985	chr2	+	70122363	70122549	True	NM_006857,NR_037862,NM_152792	chr2,chr2,chr2	+,+,-	SNRNP27,SNRNP27,ASPRV1	-1341,-1341,66908
chr4:53727600-53728066	chr4	+	53727645	53728049	True	NM_022832,NM_023940	chr4,chr4	-,+	USP46,RASL11B	-202143,445
chr8:145138759-145139397	chr8	+	145138838	145139358	True	NM_030974,NM_019037,NM_003801	chr8,chr8,chr8	-,+,+	SHARPIN,EXOSC4,GPAA1	19832,-5367,-1365
chr6:123891582-123892213	chr6	+	123891597	123892212	True	NM_001040214,NM_006073	chr6,chr6	+,-	NKAIN2,TRDN	232856,65780
chr3:121897575-121898512	chr3	+	121897612	121898349	True	NM_000388,NM_001178065,NM_001199799	chr3,chr3,chr3	+,+,-	CASR,CASR,ILDR1	4180,4831,-156485
chr5:10650796-10652347	chr5	+	10650800	10652273	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-86417,109164
chr7:100330585-100332287	chr7	+	100330779	100332334	True	NM_173059,NM_003386,NM_022574	chr7,chr7,chr7	+,+,-	ZAN,ZAN,GIGYF1	7,7,-43909
chr9:132382991-132384214	chr9	+	132383097	132384185	True	NM_199350,NM_014064	chr9,chr9	-,+	C9orf50,METTL11A	-42,4249
chr4:120350130-120351496	chr4	+	120350592	120350670	True	NR_037596,NR_037630	chr4,chr4	-,+	FLJ14186,LOC645513	-18777,25267
chr2:201407881-201409095	chr2	+	201408109	201408762	True	NM_152387,NM_152524	chr2,chr2	-,+	KCTD18,SGOL2	-33317,-17309
chr9:75137176-75138803	chr9	+	75137490	75138844	True	NM_138691,NM_006007	chr9,chr9	+,-	TMC1,ZFAND5	-824,-157327
chr8:8006324-8007043	chr8	+	8006668	8006871	True	NR_031689,NR_024362	chr8,chr8	-,+	MIR548I3,FLJ10661	-60057,79220
chr8:8006324-8007043	chr8	-	12373821	12374024	False	NR_026789,NM_001137610	chr8,chr8	+,-	FAM66A,FAM86B2	-154347,-79969
chr19:55794272-55794892	chr19	+	55794418	55794615	True	NM_012267,NM_032430,NM_001130106	chr19,chr19,chr19	-,+,-	HSPBP1,BRSK1,HSPBP1	-2667,918,-2667
chr10:75573910-75574240	chr10	+	75573963	75574263	True	NM_015037,NM_003635	chr10,chr10	+,-	KIAA0913,NDST2	-28409,-2374
chr2:232819970-232821616	chr2	+	232820032	232821346	True	NM_024409,NM_152383	chr2,chr2	-,+	NPPC,DIS3L2	-29073,4946
chr7:55755183-55756952	chr7	+	55755254	55756815	True	NM_182633,NR_027342,NR_027339,NR_027340	chr7,chr7,chr7,chr7	+,-,-,-	ZNF713,FKBP9L,FKBP9L,FKBP9L	223515,230,389,65
chr7:55755183-55756952	chr7	-	33040041	33040091	False	NM_001166118,NM_007270	chr7,chr7	-,+	NT5C3,FKBP9	40480,-43087
chr4:113559398-113560456	chr4	+	113559528	113560214	True	NR_029835,NM_016648,NR_029857,NR_029858,NR_029860,NM_015454,NR_029859,NM_018392	chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4	-,+,-,-,-,+,-,-	MIR302A,LARP7,MIR302B,MIR302C,MIR367,LARP7,MIR302D,C4orf21	9243,-1469,9549,9422,8933,-977,9063,-1377
chr11:133825600-133825878	chr11	+	133825605	133825695	True	NM_014987,NR_027276	chr11,chr11	-,+	IGSF9B,LOC100128239	1235,76471
chr19:6890138-6890608	chr19	+	6890291	6890573	True	NR_024075,NM_001974	chr19,chr19	-,+	EMR4P,EMR1	100334,-2767
chr10:92614458-92615951	chr10	+	92614591	92615983	True	NM_000872,NM_019860,NM_006413,NM_019859	chr10,chr10,chr10,chr10	-,-,+,-	HTR7,HTR7,RPP30,HTR7	1746,1746,15725,1746
chr19:39369429-39369736	chr19	+	39369514	39369626	True	NM_198445,NM_001001716,NM_001195833	chr19,chr19,chr19	-,+,-	RINL,NFKBIB,RINL	-595,20988,-595
chr5:39219696-39220258	chr5	+	39219730	39220186	True	NM_199335,NM_001465,NM_003999	chr5,chr5,chr5	-,-,+	FYB,FYB,OSMR	-63,-63,-373688
chr3:193944270-193945390	chr3	+	193944291	193945225	True	NR_024480,NM_005524	chr3,chr3	-,+	LOC100131551,HES1	85418,-90411
chr11:128759907-128760259	chr11	+	128760000	128760148	True	NM_000890,NM_145013	chr11,chr11	+,-	KCNJ5,C11orf45	1164,15494
chr17:42301924-42302680	chr17	+	42301948	42302584	True	NM_001076683,NM_001076684,NM_177441,NM_014233	chr17,chr17,chr17,chr17	-,-,+,-	UBTF,UBTF,TMUB2,UBTF	-3698,-5024,-37432,-6284
chr4:9212052-9212711	chr4	+	9212086	9212728	True	NM_001105662,NM_018942	chr4,chr4	+,-	USP17,HMX1	4402,-338543
chr11:3818796-3819092	chr11	+	3818839	3819089	True	NM_005387,NM_139131,NM_139132,NR_027017,NR_027014,NR_027015,NM_001145438,NM_016320	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,+,+,+,+,-	NUP98,NUP98,NUP98,PGAP2,PGAP2,PGAP2,PGAP2,NUP98	-17,-17,-17,100,34,42,-41,-17
chr19:49526991-49527816	chr19	+	49527401	49527765	True	NM_000894,NM_000737,NM_033378,NR_024244	chr19,chr19,chr19,chr19	-,-,+,-	LHB,CGB,CGB2,SNAR-G2	-7054,18,7364,7329
chr19:49526991-49527816	chr19	-	49534541	49534998	False	NR_024244,NM_033378,NM_033377,NR_004383,NM_000737	chr19,chr19,chr19,chr19,chr19	-,+,-,+,-	SNAR-G2,CGB2,CGB1,SNAR-G1,CGB	503,131,5650,5278,-6948
chr19:49526991-49527816	chr19	-	49547243	49547293	False	NR_004383,NM_033183,NM_033377,NM_033043	chr19,chr19,chr19,chr19	+,-,-,+	SNAR-G1,CGB8,CGB1,CGB5	-7017,5125,-7052,-192
chr19:49526991-49527816	chr19	+	49552169	49552393	False	NM_033183,NM_033142,NM_033043	chr19,chr19,chr19	-,-,+	CGB8,CGB7,CGB5	25,6654,-5118
chrX:68834604-68835802	chrX	+	68834677	68835529	True	NM_001002254,NM_001399,NM_001005609,NM_001005610,NM_001005613,NM_001005612	chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,+	AWAT2,EDA,EDA,EDA,EDA,EDA	434317,381,381,381,381,381
chr10:126425863-126427841	chr10	+	126425898	126427599	True	NM_032182,NM_014661	chr10,chr10	+,-	FAM175B,FAM53B	62754,5382
chr12:50495105-50495769	chr12	+	50495245	50495745	True	NM_147190,NM_005276	chr12,chr12	-,+	LASS5,GPD1	65412,2055
chr6:111583088-111584327	chr6	+	111583318	111583895	True	NM_153369,NR_002932	chr6,chr6	+,-	KIAA1919,GSTM2P1	-2887,-214561
chr10:21190698-21191052	chr10	+	21190710	21191058	True	NM_006393,NM_001195627	chr10,chr10	-,+	NEBL,MLLT10	-4179,632042
chr11:66676632-66677080	chr11	+	66676659	66677043	True	NM_024036,NM_022172	chr11,chr11	+,-	LRFN4,PC	-51834,-1319
chr16:65599330-65600398	chr16	+	65599329	65600284	True	NM_001795,NR_027755	chr16,chr16	+,-	CDH5,LOC283867	800240,9976
chr20:36156825-36157869	chr20	+	36156897	36157847	True	NM_005386,NM_001167821,NM_001167820,NM_001167823,NM_001167822,NM_006698,NM_181689	chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,-,-,-,-,-,+	NNAT,BLCAP,BLCAP,BLCAP,BLCAP,BLCAP,NNAT	-7341,-763,-564,-3944,-814,-564,-7341
chr1:109418145-109418569	chr1	+	109418145	109418618	True	NM_013296,NM_152763	chr1,chr1	+,-	GPSM2,AKNAD1	984,-18429
chr11:119235608-119236225	chr11	+	119235780	119236218	True	NM_171997,NR_034160	chr11,chr11	-,+	USP2,LOC100499227	-888,16269
chr5:132008193-132009794	chr5	+	132008605	132009835	True	NM_007054,NM_172348,NM_000589	chr5,chr5,chr5	-,+,+	KIF3A,IL4,IL4	63480,-18,-18
chr2:96781084-96781645	chr2	+	96781270	96781660	True	NR_003698,NM_000682	chr2,chr2	+,-	LOC729234,ADRA2B	-105022,278
chr7:30090809-30091511	chr7	+	30090946	30091259	True	NM_017946,NM_001197027	chr7,chr7	-,+	FKBP14,PLEKHA8	-24678,-23030
chr17:7388512-7388868	chr17	+	7388515	7388669	True	NM_000937,NM_020899,NM_001128833,NM_001102614	chr17,chr17,chr17,chr17	+,-,-,+	POLR2A,ZBTB4,ZBTB4,AMAC1L3	-868,-947,-5571,-3845
chr5:127420614-127421304	chr5	+	127420765	127421359	True	NR_015360,NM_001046	chr5,chr5	-,+	FLJ33630,SLC12A2	-1999,-1333
chr7:111991772-111992796	chr7	+	111991863	111992844	True	NM_001007245,NM_014705	chr7,chr7	+,-	IFRD1,DOCK4	70354,-145401
chr3:36986515-36986803	chr3	+	36986548	36986786	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	0,48054
chr11:62598541-62598970	chr11	+	62598666	62598871	True	NM_003164,NM_018093,NM_001012662	chr11,chr11,chr11	-,-,+	STX5,WDR74,SLC3A2	739,8807,24612
chr9:13252286-13254248	chr9	+	13252779	13254298	True	NM_203403,NM_003829	chr9,chr9	+,-	C9orf150,MPDZ	-477818,-2414
chr21:34597761-34598498	chr21	+	34597852	34598552	True	NM_207585,NM_207584,NR_024102,NM_000874	chr21,chr21,chr21,chr21	+,+,-,+	IFNAR2,IFNAR2,C21orf54,IFNAR2	3678,3678,-55311,3678
chr1:150947739-150947944	chr1	+	150947785	150947966	True	NM_003568,NM_022075,NM_181746	chr1,chr1,chr1	+,-,-	ANXA9,LASS2,LASS2	6532,-345,-345
chr10:105252012-105252718	chr10	+	105252030	105252664	True	NM_001129742,NM_004210	chr10,chr10	-,+	CALHM3,NEURL	-13033,1070
chrX:49000501-49001187	chrX	+	49000654	49001173	True	NM_001099681,NM_015698	chrX,chrX	+,-	MAGIX,GPKOW	18007,-20575
chr9:79073391-79074085	chr9	+	79073428	79073952	True	NM_018339,NM_001490,NM_001097633	chr9,chr9,chr9	-,+,+	RFK,GCNT1,GCNT1	-63984,115,115
chr19:12937431-12938430	chr19	+	12937658	12937952	True	NM_001080997,NM_014975,NM_031429	chr19,chr19,chr19	-,+,-	RTBDN,MAST1,RTBDN	3305,11306,8328
chr11:30038795-30039002	chr11	+	30038972	30039034	True	NM_002233,NM_000510	chr11,chr11	-,+	KCNA4,FSHB	-395,213528
chr2:130987118-130987909	chr2	+	130987251	130987869	True	NM_025029,NM_207312	chr2,chr2	+,-	MZT2B,TUBA3E	-47801,-31217
chr17:42302748-42303210	chr17	+	42302922	42303005	True	NM_001076683,NM_001076684,NM_177441,NM_014233	chr17,chr17,chr17,chr17	-,-,+,-	UBTF,UBTF,TMUB2,UBTF	-4672,-5998,-38399,-7258
chr3:197518714-197519369	chr3	+	197518745	197519327	True	NM_001145642,NM_032773	chr3,chr3	-,+	KIAA0226,LRCH3	-42177,-651
chr17:19016256-19017251	chr17	+	19016432	19017259	True	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	13522,-66096
chr17:19016256-19017251	chr17	-	19090018	19090845	False	NM_006613,NM_001102664	chr17,chr17	-,+	GRAP,EPN2	-139682,49844
chr17:19016256-19017251	chr17	+	19094041	19094868	False	NM_006613,NM_001102664	chr17,chr17	-,+	GRAP,EPN2	-143705,45821
chr17:19016256-19017251	chr17	-	18963914	18964741	False	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	66040,-13578
chr17:19016256-19017251	chr17	+	18967946	18968773	False	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	62008,-17610
chr11:16327981-16328330	chr11	+	16328006	16328158	True	NM_001145819,NM_014267	chr11,chr11	-,+	SOX6,C11orf58	96319,431989
chr7:145822522-145824041	chr7	+	145822710	145824058	True	NR_031645,NM_014141	chr7,chr7	-,+	MIR548F4,CNTNAP2	1251205,-9315
chr22:26826273-26826682	chr22	+	26826284	26826692	True	NM_152841,NM_020437	chr22,chr22	-,+	HPS4,ASPHD2	48909,-1055
chr6:48005941-48006298	chr6	+	48005947	48006105	True	NR_033806,NM_001013732	chr6,chr6	+,-	OPN5,C6orf138	-251195,30378
chr1:24715715-24716798	chr1	+	24715799	24716835	True	NM_020448,NM_001199013	chr1,chr1	+,-	NIPAL3,C1orf201	25409,23477
chr14:61753348-61753845	chr14	+	61753560	61753670	True	NM_001017970,NM_006255	chr14,chr14	-,+	TMEM30B,PRKCH	-5030,34844
chr11:120081035-120081464	chr11	+	120081057	120081381	True	NM_012101,NM_178507	chr11,chr11	-,+	TRIM29,OAF	-72194,365
chr8:144640860-144641333	chr8	+	144641138	144641328	True	NM_024736,NM_001166237,NM_001100878	chr8,chr8,chr8	+,+,-	GSDMD,GSDMD,C8orf73	-712,-5632,13650
chr8:10587377-10587602	chr8	+	10587463	10587613	True	NM_001040032,NM_031439	chr8,chr8	+,-	C8orf74,SOX7	-57367,459
chr20:23499931-23501517	chr20	+	23500126	23501300	True	NM_080610,NR_001279	chr20,chr20	-,+	CST9L,CSTT	48136,-397
chr1:43227864-43229265	chr1	+	43228014	43229057	True	NM_022356,NM_001146289,NM_024097	chr1,chr1,chr1	-,-,+	LEPRE1,LEPRE1,C1orf50	3748,3748,3858
chr10:90341146-90342592	chr10	+	90341411	90342534	True	NM_018363,NM_001031709,NM_001010939	chr10,chr10,chr10	-,-,+	RNLS,RNLS,LIPJ	598,598,3984
chr18:44559451-44559798	chr18	+	44559656	44559790	True	NM_145653,NM_001100817,NM_016427,NM_031303	chr18,chr18,chr18,chr18	-,-,-,+	TCEB3C,TCEB3CL,TCEB3B,KATNAL2	-3207,-3443,2248,-32921
chr11:62600639-62601071	chr11	+	62600847	62601069	True	NM_003164,NM_018093,NM_001012662	chr11,chr11,chr11	-,-,+	STX5,WDR74,SLC3A2	-1287,6609,22414
chr12:122982772-122983974	chr12	+	122983358	122983761	True	NM_014708,NM_017612	chr12,chr12	+,-	KNTC1,ZCCHC8	28047,1818
chr21:47265815-47266643	chr21	+	47265932	47266656	True	NM_194255,NM_020528,NM_001130141	chr21,chr21,chr21	-,+,+	SLC19A1,PCBP3,PCBP3	-303547,3218,3218
chr6:10751410-10753089	chr6	+	10751465	10752444	True	NM_030969,NR_026736,NM_001127711	chr6,chr6,chr6	+,-,+	TMEM14B,C6orf52,TMEM14B	-3522,-56435,-3522
chr3:119261999-119263362	chr3	+	119262062	119263381	True	NM_005191,NM_001125	chr3,chr3	-,+	CD80,ADPRH	15150,35141
chr19:46011409-46011754	chr19	+	46011425	46011738	True	NM_003370,NM_206900,NM_001080401	chr19,chr19,chr19	+,-,+	VASP,RTN2,PPM1N	-788,-11112,-9745
chr5:79330331-79331045	chr5	+	79330341	79330781	True	NM_003248,NM_001167741	chr5,chr5	+,-	THBS4,MTX3	388,-43253
chr2:58317250-58318821	chr2	+	58317631	58318437	True	NM_001114636,NM_001130481	chr2,chr2	-,+	FANCL,VRK2	150128,-43842
chr16:67209078-67210752	chr16	+	67209103	67210659	True	NM_001185058,NM_003946,NM_001040715,NM_001185057	chr16,chr16,chr16,chr16	+,+,-,+	NOL3,NOL3,KIAA0895L,NOL3	-4749,-1398,7274,-1389
chr13:21347442-21347786	chr13	+	21347465	21347681	True	NM_138284,NM_174928	chr13,chr13	+,-	IL17D,N6AMT2	-70034,426
chr22:46730093-46730692	chr22	+	46730203	46730645	True	NR_024009,NM_018006	chr22,chr22	-,+	CN5H6.4,TRMU	-37646,652
chr5:74633394-74633614	chr5	+	74633403	74633657	True	NM_000859,NM_001130996,NM_001164443	chr5,chr5,chr5	+,+,-	HMGCR,HMGCR,ANKRD31	-461,-461,-100700
chr19:52150119-52150545	chr19	+	52150262	52150572	True	NR_029843,NM_001098612	chr19,chr19	+,-	MIR99B,SIGLEC14	45292,-130
chr20:61003874-61004307	chr20	+	61004066	61004356	True	NM_001024,NM_080833	chr20,chr20	+,-	RPS21,C20orf151	-41996,-1437
chr1:26144634-26146237	chr1	+	26144798	26146226	True	NM_019557,NR_024498,NM_001099625,NM_001099627,NM_001099626	chr1,chr1,chr1,chr1,chr1	+,-,+,+,+	FAM54B,LOC646471,FAM54B,FAM54B,FAM54B	457,3921,170,170,1092
chr1:229771049-229771575	chr1	+	229771051	229771603	True	NM_014409,NM_001025247,NM_014777	chr1,chr1,chr1	-,-,+	TAF5L,TAF5L,URB2	-9257,-9257,-9121
chr12:3070286-3071413	chr12	+	3070333	3071253	True	NM_003213,NM_202003,NM_201443,NM_201441	chr12,chr12,chr12,chr12	+,-,+,+	TEAD4,FOXM1,TEAD4,TEAD4	-1906,-84030,-1636,-1906
chr8:23264054-23265147	chr8	+	23264201	23264911	True	NM_001136108,NM_002318	chr8,chr8	+,-	R3HCC1,LOXL2	-118650,-2479
chr9:35066675-35067430	chr9	+	35066683	35067427	True	NM_007126,NM_203299	chr9,chr9	-,+	VCP,C9orf131	5362,-24511
chr15:44072496-44073856	chr15	+	44072669	44073480	True	NM_025165,NM_001199877	chr15,chr15	-,+	ELL3,SERF2	-3167,-3426
chr3:120469464-120469767	chr3	+	120469470	120469784	True	NM_173825,NM_005513	chr3,chr3	-,+	RABL3,GTF2E1	-8086,-7963
chr22:18111878-18112699	chr22	+	18112007	18112711	True	NM_015367,NM_001039366,NM_001039367,NM_001696	chr22,chr22,chr22,chr22	+,-,-,-	BCL2L13,ATP6V1E1,ATP6V1E1,ATP6V1E1	8773,-419,-419,-419
chr11:64322144-64322440	chr11	+	64322206	64322344	True	NM_018484,NM_138734	chr11,chr11	+,-	SLC22A11,NRXN2	753,88493
chr20:25176851-25177200	chr20	+	25176860	25177202	True	NR_027091,NM_001114089,NM_001247	chr20,chr20,chr20	-,+,+	LOC284798,ENTPD6,ENTPD6	-47434,-572,-572
chrX:7806871-7807855	chrX	+	7806946	7807609	True	NM_013452,NM_004650	chrX,chrX	+,-	VCX,PNPLA4	2693,87916
chr2:20209626-20211081	chr2	+	20209981	20210967	True	NR_033875,NM_002381	chr2,chr2	+,-	FLJ12334,MATN3	-141424,1538
chr22:45607911-45608343	chr22	+	45607923	45608333	True	NM_015264,NM_153645	chr22,chr22	-,+	KIAA0930,NUP50	64,-47422
chr5:133341588-133342005	chr5	+	133341593	133341921	True	NR_036625,NR_036624,NM_003374,NM_003202	chr5,chr5,chr5,chr5	-,-,-,+	VDAC1,VDAC1,VDAC1,TCF7	-936,-936,-769,108480
chrX:100547149-100548159	chrX	+	100547461	100548182	True	NM_024885,NM_001939,NM_001168474	chrX,chrX,chrX	-,+,-	TAF7L,DRP2,TAF7L	-64,-72579,-1136
chrX:10799155-10800966	chrX	+	10799399	10800643	True	NM_001122608,NM_033290	chrX,chrX	+,-	HCCS,MID1	328762,51216
chr2:75940181-75941343	chr2	+	75940438	75941214	True	NM_001201334,NM_001201335,NM_014763,NM_003203	chr2,chr2,chr2,chr2	-,-,+,-	C2orf3,C2orf3,MRPL19,C2orf3	-2706,-2327,-66590,-2327
chr1:156644858-156645214	chr1	+	156644860	156645260	True	NM_021948,NM_006617	chr1,chr1	+,-	BCAN,NES	-33171,1979
chr14:103058255-103058485	chr14	+	103058418	103058488	True	NM_152326,NM_015156	chr14,chr14	-,+	ANKRD9,RCOR1	-82290,744
chr10:77574394-77575851	chr10	+	77574509	77575869	True	NM_032772,NM_032024	chr10,chr10	-,+	ZNF503,C10orf11	-412996,-32042
chr1:157514807-157515409	chr1	+	157514852	157515304	True	NM_001195388,NM_031281,NR_001560	chr1,chr1,chr1	-,-,+	FCRL5,FCRL5,CYCSP52	7060,7060,-416756
chr6:47468191-47468573	chr6	+	47468190	47468490	True	NM_014452,NM_012120	chr6,chr6	-,+	TNFRSF21,CD2AP	-190510,-22716
chrY:3447342-3447612	chrY	+	3447368	3447638	True	NM_003140,NM_139214	chrY,chrY	-,+	SRY,TGIF2LY	-791576,-293
chrY:3447342-3447612	chrX	+	89177167	89177437	False	NM_138960,NM_004538	chrX,chrX	+,-	TGIF2LX,NAP1L3	-278,3751295
chr12:8380577-8381514	chr12	+	8380778	8381002	True	NM_018088,NR_026788	chr12,chr12	-,+	FAM90A1,FAM66C	-564,-48024
chr12:8380577-8381514	chr3	+	129813865	129813915	False	NM_001136152,NR_024252	chr3,chr3	+,-	ALG1L2,LOC729375	-13242,16411
chr12:8380577-8381514	chr8	+	12036842	12036892	False	NM_001083537,NR_027425	chr8,chr8	-,+	FAM86B1,FAM66D	14782,-63602
chr8:120220071-120220605	chr8	+	120220110	120220506	True	NM_052886,NM_002546	chr8,chr8	+,-	MAL2,TNFRSF11B	103,-255727
chr2:208033313-208033992	chr2	+	208033334	208033885	True	NM_003709,NM_173077	chr2,chr2	-,+	KLF7,CPO	-2720,-229114
chr2:86561933-86562693	chr2	+	86561947	86562613	True	NM_018433,NM_001164730,NM_001164731,NM_001164732,NM_022912	chr2,chr2,chr2,chr2,chr2	+,-,-,-,-	KDM3A,REEP1,REEP1,REEP1,REEP1	105657,2643,2214,2214,2214
chr12:113497376-113497856	chr12	+	113497545	113497892	True	NM_004416,NM_001193521	chr12,chr12	+,-	DTX1,RASAL1	-1934,75717
chr3:14166479-14166681	chr3	+	14166481	14166715	True	NM_144636,NM_001098502,NM_024334	chr3,chr3,chr3	-,-,+	CHCHD4,CHCHD4,TMEM43	-110,-110,-92
chr2:71226245-71226949	chr2	+	71226554	71226954	True	NM_144582,NM_024933	chr2,chr2	-,+	TEX261,ANKRD53	-4553,-21030
chr9:123963392-123963627	chr9	+	123963403	123963485	True	NM_001127662,NM_016322	chr9,chr9	+,-	GSN,RAB14	66894,930
chr3:57259695-57259954	chr3	+	57259694	57259874	True	NM_012096,NM_003865	chr3,chr3	+,-	APPL1,HESX1	1890,-25414
chr5:158888351-158888645	chr5	+	158888350	158888542	True	NR_037889,NR_027110	chr5,chr5	+,-	LOC285626,LOC285627	-129884,4804
chr1:207949671-207949995	chr1	+	207949766	207949943	True	NM_172361,NR_029832	chr1,chr1	+,-	CD46,MIR29C	-24434,25392
chr22:27026387-27026672	chr22	+	27026456	27026722	True	NM_001886,NM_001887	chr22,chr22	+,-	CRYBA4,CRYBB1	-8579,-12465
chr14:93264185-93266176	chr14	+	93264210	93265396	True	NM_005606,NM_005113	chr14,chr14	-,+	LGMN,GOLGA5	-49163,-3611
chr19:16582905-16583708	chr19	+	16583006	16583074	True	NM_021235,NM_032207	chr19,chr19	-,+	EPS15L1,C19orf44	-244,24130
chr11:117948173-117949591	chr11	+	117948306	117949542	True	NM_001173551,NM_001173552,NM_001142349,NM_001083947,NM_019894	chr11,chr11,chr11,chr11,chr11	+,+,-,+,+	TMPRSS4,TMPRSS4,SCN4B,TMPRSS4,TMPRSS4	-631,-631,66692,-631,-631
chr3:38076893-38077583	chr3	+	38077236	38077463	True	NM_006225,NM_007335,NM_007337	chr3,chr3,chr3	-,+,+	PLCD1,DLEC1,DLEC1	-6082,3232,3232
chr16:89789603-89790695	chr16	+	89789636	89790672	True	NM_001113525,NM_152287,NM_004913	chr16,chr16,chr16	+,+,-	ZNF276,ZNF276,C16orf7	-1735,-2294,-2242
chr22:22307571-22308144	chr22	+	22307584	22307960	True	NM_148176,NM_014634	chr22,chr22	+,-	PPIL2,PPM1F	-287368,-334
chr16:88220652-88220877	chr16	+	88220691	88220885	True	NM_001173543,NM_001739	chr16,chr16	+,-	BANP,CA5A	-217118,-250579
chr16:88220652-88220877	chr16	+	29232488	29232544	False	NR_002939,NM_001031827	chr16,chr16	+,-	RUNDC2C,BOLA2	69996,233791
chr1:6614832-6615090	chr1	+	6614886	6615110	True	NM_177540,NM_024654,NM_138697	chr1,chr1,chr1	+,-,+	TAS1R1,NOL9,TAS1R1	227,-228,227
chr12:76424345-76424842	chr12	+	76424628	76424840	True	NM_007350,NM_006851	chr12,chr12	-,+	PHLDA1,GLIPR1	766,-550166
chr17:47653472-47653674	chr17	+	47653560	47653648	True	NM_001007226,NM_007225	chr17,chr17	-,+	SPOP,NXPH3	101927,-313
chr16:2688637-2689273	chr16	+	2688661	2689211	True	NR_024492,NM_031948	chr16,chr16	+,-	FLJ42627,PRSS27	-19,81391
chr16:2688637-2689273	chr16	-	2610982	2611532	False	NR_036139,NM_031268	chr16,chr16	-,+	MIR3178,PDPK1	-28976,-23063
chr11:120079212-120079881	chr11	+	120079326	120079898	True	NM_012101,NM_178507	chr11,chr11	-,+	TRIM29,OAF	-70463,1848
chr7:75023028-75024020	chr7	+	75023229	75023825	True	NM_198853,NM_198924,NR_003614	chr7,chr7,chr7	+,+,-	TRIM74,TRIM73,PMS2L2	1077,1077,-35014
chr7:75023028-75024020	chr7	-	72441137	72441667	False	NR_033323,NR_003602	chr7,chr7	-,+	NSUN5P2,LOC541473	-15835,-996
chr2:202898044-202898429	chr2	+	202898178	202898292	True	NM_001005781,NM_003507	chr2,chr2	-,+	SUMO1,FZD7	205080,1017
chr11:64981646-64981854	chr11	+	64981670	64981852	True	NM_172230,NM_001004326,NR_033396	chr11,chr11,chr11	-,+,+	SYVN1,SLC22A20,SLC22A20	-79667,-410,-410
chr1:66285060-66285275	chr1	+	66285060	66285173	True	NM_002600,NR_029516	chr1,chr1	+,-	PDE4B,MIR101-1	-26263,-760869
chr17:34992324-34992841	chr17	+	34992462	34992687	True	NM_024864,NM_001033580	chr17,chr17	+,-	MRM1,MYO19	-34493,-101157
chr5:172755132-172755377	chr5	+	172755164	172755420	True	NM_013980,NM_003714	chr5,chr5	+,-	BNIP1,STC2	-183770,1136
chr21:35560103-35560862	chr21	+	35560135	35560911	True	NM_001127670,NR_027267,NR_027266	chr21,chr21,chr21	-,+,+	KCNE1,C21orf82,C21orf82	267202,-7208,-7208
chr19:44037753-44038050	chr19	+	44037846	44038078	True	NM_014297,NM_174945	chr19,chr19	-,+	ETHE1,ZNF575	-6450,-557
chr16:85617757-85618062	chr16	+	85617928	85618104	True	NM_001134473,NM_016095	chr16,chr16	+,-	KIAA0182,GINS2	26924,104534
chr10:27539952-27540478	chr10	+	27539967	27540352	True	NR_003525,NM_032844,NR_024150,NM_001042473	chr10,chr10,chr10,chr10	-,+,-,-	LOC387646,MASTL,ACBD5,ACBD5	934,-96265,-8899,-8899
chr7:74585286-74585673	chr7	+	74585379	74585545	True	NM_001003795,NR_003187	chr7,chr7	+,-	GTF2IRD2B,NCF1C	-77096,2321
chr7:74585286-74585673	chr7	-	72636883	72637049	False	NR_002164,NR_003186	chr7,chr7	-,+	GTF2IRD2P1,NCF1B	48672,-2260
chr7:74585286-74585673	chr7	-	74190583	74190749	False	NM_173537,NM_000265	chr7,chr7	-,+	GTF2IRD2,NCF1	77155,-2325
chrX:153521948-153522235	chrX	+	153522125	153522272	True	NM_001205201,NM_001145933,NM_012253,NM_001586	chrX,chrX,chrX,chrX	-,+,+,-	TEX28,TKTL1,TKTL1,TEX28	1349,1754,1754,1239
chrX:153521948-153522235	chrX	+	153447199	153447346	False	NM_001586,NM_000513,NM_001048181	chrX,chrX,chrX	-,+,+	TEX28,OPN1MW,OPN1MW2	76165,738,738
chrX:153521948-153522235	chrX	+	153484319	153484465	False	NM_001586,NM_000513,NM_001048181	chrX,chrX,chrX	-,+,+	TEX28,OPN1MW,OPN1MW2	39046,737,737
chr16:14404072-14404640	chr16	+	14404093	14404591	True	NR_029854,NM_001134477,NR_030177	chr16,chr16,chr16	+,-,+	MIR365-1,PARN,MIR193B	-1007,319579,-6325
chr11:133400078-133400370	chr11	+	133400078	133400220	True	NR_027276,NM_001012393	chr11,chr11	+,-	LOC100128239,OPCML	501946,2233
chr19:839923-840679	chr19	+	840355	840691	True	NM_002777,NM_024888	chr19,chr19	+,-	PRTN3,LPPR3	293,-18403
chr19:55416786-55417498	chr19	+	55416922	55417448	True	NM_004829,NR_027041,NR_027043,NM_001127255,NM_001145457,NM_001145458	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,-,+,+	NCR1,NCR1,NCR1,NLRP7,NCR1,NCR1	59,59,59,41475,59,59
chr9:99142472-99143048	chr9	+	99142475	99142711	True	NM_007001,NM_014282	chr9,chr9	-,+	SLC35D2,HABP4	3331,69702
chr1:70698973-70699964	chr1	+	70699455	70699995	True	NM_017768,NM_004768	chr1,chr1	-,+	LRRC40,SRSF11	-28094,-28154
chr7:150726749-150727711	chr7	+	150726934	150727110	True	NM_173681,NM_007188	chr7,chr7	-,+	ATG9B,ABCB8	-5348,-1475
chr2:11294583-11294814	chr2	+	11294588	11294819	True	NM_152391,NM_004850	chr2,chr2	+,-	PQLC3,ROCK2	720,189943
chr7:98921606-98922111	chr7	+	98921835	98921985	True	NM_014891,NM_006409,NM_001190996	chr7,chr7,chr7	-,+,+	PDAP1,ARPC1A,ARPC1A	84370,1510,1510
chr11:706783-707022	chr11	+	706904	706974	True	NM_021008,NM_022772	chr11,chr11	-,+	DEAF1,EPS8L2	-11164,-835
chr8:49833970-49834265	chr8	+	49834018	49834147	True	NM_003068,NM_001007176	chr8,chr8	-,+	SNAI2,C8orf22	-19,150755
chr6:26058987-26060561	chr6	+	26059223	26060476	True	NM_005319,NM_003531	chr6,chr6	-,+	HIST1H1C,HIST1H3C	-2524,-13641
chr10:85999378-85999895	chr10	+	85999401	85999911	True	NM_001012720,NM_001012722,NM_002921,NM_015613	chr10,chr10,chr10,chr10	+,+,+,-	RGR,RGR,RGR,LRIT1	4897,4897,4897,1356
chr1:182766582-182767485	chr1	+	182766591	182767271	True	NM_033345,NM_001200052,NM_001200050,NM_001200051,NM_001200056,NM_030769	chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,+,+,+	RGS8,NPL,NPL,NPL,NPL,NPL	-124524,-8058,-8058,-8058,-8058,-8058
chr17:79610559-79611024	chr17	+	79610757	79610851	True	NM_017921,NM_031945	chr17,chr17	-,+	NPLOC4,TSPAN10	-6619,-1459
chr16:32937119-32938023	chr16	+	32937209	32938014	True	NR_003083,NM_016212	chr16,chr16	-,+	SLC6A10P,TP53TG3	-40746,266965
chr16:32937119-32938023	chr16	+	31994412	31994462	False	NR_002827,NM_003414	chr16,chr16	-,+	HERC2P4,ZNF267	169462,-109384
chr16:32937119-32938023	chr16	-	33729601	33730338	False	NR_033866,NM_001205265	chr16,chr16	-,+	LOC390705,TP53TG3B	-430899,-467532
chr13:77501408-77502139	chr13	+	77501689	77502127	True	NR_026983,NM_138444	chr13,chr13	+,-	BTF3P11,KCTD12	457,-41149
chr2:110551931-110552151	chr2	+	110551943	110552155	True	NM_178584,NM_001123363,NM_001037866,NM_032260,NM_005054	chr2,chr2,chr2,chr2,chr2	-,+,+,+,+	SEPT10,RGPD6,RGPD6,RGPD5,RGPD5	-180160,-1659,-1659,-1659,-28
chr2:110551931-110552151	chr2	-	111334488	111334700	False	NM_001142807,NM_001037866,NM_001123363,NM_032260,NM_005054	chr2,chr2,chr2,chr2,chr2	+,-,-,-,-	ACOXL,RGPD6,RGPD6,RGPD5,RGPD5	155449,1659,1659,1659,28
chr2:110551931-110552151	chr2	-	113190975	113191129	False	NM_153712,NM_001164463,NM_005054	chr2,chr2,chr2	+,-,-	TTL,RGPD8,RGPD5	48613,143,28
chr5:59827372-59827702	chr5	+	59827402	59827563	True	NR_028509,NM_001165899	chr5,chr5	+,-	PART1,PDE4D	-43699,-43477
chr15:45724578-45726090	chr15	+	45724913	45725883	True	NM_001482,NM_197955,NM_032413,NR_030599	chr15,chr15,chr15,chr15	-,+,+,+	GATM,C15orf48,C15orf48,MIR147B	-53933,-2201,-2201,8
chr1:231117558-231119080	chr1	+	231117631	231118894	True	NM_001122835,NM_022786,NM_024525	chr1,chr1,chr1	-,+,-	TTC13,ARV1,TTC13	-3013,-2859,-3013
chr18:67873338-67873586	chr18	+	67873366	67873554	True	NM_173630,NM_004232	chr18,chr18	-,+	RTTN,SOCS6	-404,82582
chr11:67418785-67419896	chr11	+	67419034	67419926	True	NM_007103,NM_080658	chr11,chr11	+,-	NDUFV1,ACY3	-44771,-904
chr6:149069349-149069959	chr6	+	149069483	149069905	True	NM_207360,NM_005715	chr6,chr6	-,+	ZC3H12D,UST	736293,-1263
chrX:20009621-20010238	chrX	+	20009647	20010142	True	NR_024440,NM_001173456	chrX,chrX	-,+	LOC729609,PDHA1	-1750,-647688
chr5:176239569-176239905	chr5	+	176239642	176239950	True	NM_133369,NM_002115	chr5,chr5	+,-	UNC5A,HK3	-2133,86433
chr6:134209788-134210037	chr6	+	134209792	134209983	True	NM_003206,NM_145176,NM_198392	chr6,chr6,chr6	+,-,+	TCF21,SLC2A12,TCF21	276,163861,275
chr11:75430889-75431148	chr11	+	75430934	75431196	True	NM_025098,NM_207577	chr11,chr11	+,-	MOGAT2,MAP6	-2051,-51455
chr6:32632641-32632857	chr6_dbb_hap3	+	3911389	3911453	False	NM_020056,NM_002123	chr6_dbb_hap3,chr6_dbb_hap3	+,-	HLA-DQA2,HLA-DQB1	80272,1719
chr6:32632641-32632857	chr6	+	32632732	32632842	True	NM_002122,NM_002123	chr6,chr6	+,-	HLA-DQA1,HLA-DQB1	-27600,1674
chr1:160916023-160916425	chr1	+	160916134	160916199	True	NM_080878,NM_002348	chr1,chr1	-,+	ITLN2,LY9	8445,-150263
chr16:28891412-28891795	chr16	+	28891547	28891749	True	NM_003321,NM_173201,NM_004320	chr16,chr16,chr16	-,+,+	TUFM,ATP2A1,ATP2A1	-33818,-1789,-1789
chr5:56120750-56121133	chr5	+	56120785	56121184	True	NM_152622,NM_005921	chr5,chr5	-,+	MIER3,MAP3K1	126822,-9940
chr19:9204282-9205638	chr19	+	9204305	9205477	True	NM_001005193,NM_001004456	chr19,chr19	-,+	OR7G2,OR1M1	8555,-435
chr6:90139485-90140973	chr6	+	90139580	90140730	True	NM_021244,NM_014942	chr6,chr6	-,+	RRAGD,ANKRD6	-17585,2166
chr1:156828452-156828812	chr1	+	156828468	156828758	True	NM_001012331,NM_002529,NM_014215	chr1,chr1,chr1	+,+,-	NTRK1,NTRK1,INSRR	1912,1912,4
chr6:160210753-160211066	chr6	+	160210777	160211041	True	NR_002965,NR_002960,NM_014161,NM_030752,NM_001008897	chr6,chr6,chr6,chr6,chr6	-,-,+,-,-	SNORA29,SNORA20,MRPL18,TCP1,TCP1	-4012,-9364,450,-42,-42
chr3:137735615-137737269	chr3	+	137735916	137737113	True	NM_016369,NM_001170538	chr3,chr3	+,-	CLDN18,DZIP1L	-6968,95259
chr6:117912936-117913384	chr6	+	117913005	117913130	True	NM_138459,NM_001017408	chr6,chr6	+,-	NUS1,GOPC	83486,10632
chr2:232262456-232262753	chr2	+	232262607	232262789	True	NR_002921,NM_145236	chr2,chr2	-,+	SNORA75,B3GNT7	57908,-2323
chrX:1400808-1402551	chrY	+	1351251	1351943	False	NM_022148,NM_172247,NM_001161530	chrY,chrY,chrY	-,+,+	CRLF2,CSF2RA,CSF2RA	-69721,-131,-131
chrX:1400808-1402551	chrX	+	1401251	1401943	True	NM_022148,NM_172247,NM_001161530	chrX,chrX,chrX	-,+,+	CRLF2,CSF2RA,CSF2RA	-69721,-131,-131
chr10:5407148-5407559	chr10	+	5407154	5407540	True	NM_001171864,NM_053049	chr10,chr10	-,+	TUBAL3,UCN3	39303,-229
chr9:99067089-99067595	chr9	+	99067088	99067612	True	NM_014282,NM_000197	chr9,chr9	+,-	HABP4,HSD17B3	144801,-2654
chr15:23932099-23932624	chr15	+	23932320	23932444	True	NM_005664,NM_002487	chr15,chr15	+,-	MKRN3,NDN	-121917,56
chr17:80707462-80707788	chr17	+	80707580	80707656	True	NM_005993,NM_006822	chr17,chr17	+,-	TBCD,RAB40B	2283,-50982
chr11:67396496-67396720	chr11	+	67396500	67396754	True	NM_007103,NM_181843	chr11,chr11	+,-	NDUFV1,NUDT8	-22228,697
chr14:67878700-67878936	chr14	+	67878700	67878928	True	NM_016445,NM_004094	chr14,chr14	-,+	PLEK2,EIF2S1	-50,-51717
chr6:44237691-44238258	chr6	+	44237711	44237969	True	NM_001137560,NM_004556	chr6,chr6	+,-	TMEM151B,NFKBIE	510,-4186
chr3:121383455-121383847	chr3	+	121383491	121383885	True	NM_005335,NM_016298	chr3,chr3	-,+	HCLS1,FBXO40	-3700,-71372
chr7:6693653-6693857	chr7	+	6693666	6693850	True	NM_017560,NM_006956	chr7,chr7	+,-	ZNF853,ZNF12	-38190,52766
chr5:141546-142180	chr5	+	141659	142226	True	NM_052909,NM_145265	chr5,chr5	+,-	PLEKHG4B,CCDC127	-1337,76121
chr19:12948697-12949099	chr19	+	12948709	12949065	True	NM_001080997,NM_014975,NM_031429	chr19,chr19,chr19	-,+,-	RTBDN,MAST1,RTBDN	-7502,193,-2479
chrX:153143389-153143958	chrX	+	153143479	153143919	True	NM_000425,NM_001143963,NM_024003,NR_027419	chrX,chrX,chrX,chrX	-,-,-,+	L1CAM,L1CAM,L1CAM,AVPR2	-2080,-2080,-2080,24065
chr18:6857778-6858688	chr18	+	6857784	6858453	True	NR_034100,NM_001010000	chr18,chr18	-,+	LOC400643,ARHGAP28	71472,-23413
chr7:42802550-42803117	chr7	+	42802553	42803163	True	NM_031903,NM_001099858	chr7,chr7	+,-	MRPL32,C7orf25	168775,148576
chr14:94526931-94527314	chr14	+	94526969	94527343	True	NM_020414,NM_145249	chr14,chr14	-,+	DDX24,IFI27L1	20265,20295
chr1:40370268-40372096	chr1	+	40370909	40371842	True	NM_001033081,NM_001033082,NM_005376,NM_001136493	chr1,chr1,chr1,chr1	-,-,-,+	MYCL1,MYCL1,MYCL1,MFSD2A	-3222,-3222,-3222,48941
chr2:238501204-238501415	chr2	+	238501234	238501460	True	NM_015893,NM_022449,NR_033308	chr2,chr2,chr2	+,-,-	PRLH,RAB17,RAB17	-26068,-1465,-1465
chr21:18983366-18984278	chr21	+	18983453	18984212	True	NM_001130914,NM_001338,NM_006806	chr21,chr21,chr21	-,+,-	BTG3,CXADR,BTG3	1108,-98180,1108
chr20:30411430-30412014	chr20	+	30411573	30412013	True	NM_004118,NM_033118	chr20,chr20	-,+	FOXS1,MYLK2	21457,-4446
chr22:50912346-50912738	chr22	+	50912435	50912713	True	NM_024866,NM_002972	chr22,chr22	+,-	ADM2,SBF1	7298,801
chr22:22598494-22599062	chr22	+	22598501	22599103	True	NM_007128,NM_003935	chr22,chr22	+,-	VPREB1,TOP3B	96,-261354
chr17:48134070-48134273	chr17	+	48134070	48134322	True	NM_005220,NM_002204,NM_005501	chr17,chr17,chr17	-,+,+	DLX3,ITGA3,ITGA3	-61482,-781,-781
chr16:1386963-1387208	chr16	+	1386963	1387177	True	NM_001001410,NM_001199098,NM_001199099,NM_003933,NM_001199097,NM_001199096	chr16,chr16,chr16,chr16,chr16,chr16	-,+,+,+,+,+	C16orf42,BAIAP3,BAIAP3,BAIAP3,BAIAP3,BAIAP3	14746,-3408,-3408,-2509,-3408,-816
chr9:33402649-33403234	chr9	+	33402649	33403159	True	NM_001170,NM_002504	chr9,chr9	-,+	AQP7,NFX1	-132,-112282
chr18:14336742-14337023	chr18	+	14336835	14337029	True	NR_024076,NR_026756	chr18,chr18	-,+	CXADRP3,LOC284233	161726,392
chr18:14336742-14337023	chr21	-	15221132	15221194	False	NM_174981,NR_026755	chr21,chr21	+,-	POTED,C21orf15	-238685,-447
chr1:16368890-16369921	chr1	+	16368997	16369421	True	NM_014424,NM_001165945,NM_000085	chr1,chr1,chr1	-,+,+	HSPB7,CLCNKB,CLCNKB	-23712,5862,825
chr11:117800274-117800865	chr11	+	117800564	117800876	True	NM_001558,NM_001077263	chr11,chr11	+,-	IL10RA,TMPRSS13	56229,-449
chr11:107995081-107997023	chr11	+	107995381	107996346	True	NM_000019,NM_002519	chr11,chr11	+,-	ACAT1,NPAT	-3174,97071
chr11:71248793-71249135	chr11	+	71248847	71249031	True	NM_021046,NM_001005405	chr11,chr11	+,-	KRTAP5-8,KRTAP5-11	39,44940
chr12:53695924-53696650	chr12	+	53696089	53696685	True	NM_021640,NM_002624,NM_001173466,NM_145897	chr12,chr12,chr12,chr12	+,+,-,+	C12orf10,PFDN5,AAAS,PFDN5	-2677,-6912,18777,-6912
chr21:46047499-46047736	chr21	+	46047523	46047681	True	NM_198698,NM_198690,NM_181688	chr21,chr21,chr21	-,+,+	KRTAP12-4,KRTAP10-9,KRTAP10-10	26945,-534,9591
chr7:1271720-1271923	chr7	+	1271773	1271875	True	NM_001080461,NM_182491	chr7,chr7	+,-	UNCX,ZFAND2A	778,-71918
chr9:107510761-107510997	chr9	+	107510760	107510986	True	NM_015469,NM_001001956	chr9,chr9	+,-	NIPSNAP3A,OR13C9	-846,-130275
chr13:36788866-36789229	chr13	+	36789019	36789213	True	NM_017826,NM_001111046	chr13,chr13	-,+	SOHLH2,CCNA1	-267,216753
chr8:143823444-143823873	chr8	+	143823466	143823916	True	NM_016647,NM_020427	chr8,chr8	+,-	C8orf55,SLURP1	-14896,11
chr14:54861242-54863138	chr14	+	54861609	54862744	True	NM_005192,NM_005776,NM_001130851	chr14,chr14,chr14	+,-,+	CDKN3,CNIH,CDKN3	928,45462,928
chr6:111408684-111408889	chr6	+	111408750	111408938	True	NM_018593,NR_002932	chr6,chr6	+,-	SLC16A10,GSTM2P1	-20,-39993
chr14:23341968-23342580	chr14	+	23342045	23342389	True	NM_001077351,NM_014045	chr14,chr14	-,+	RBM23,LRP10	46057,-1136
chr15:80219474-80219704	chr15	+	80219617	80219703	True	NR_028330,NR_037653,NR_037652,NM_001100880,NM_001199757,NM_001199760	chr15,chr15,chr15,chr15,chr15,chr15	+,-,-,-,-,-	C15orf37,ST20,ST20,ST20,ST20,ST20-MTHFS	-4569,-3521,-3521,-3953,-3953,-4169
chr1:15929418-15929785	chr1	+	15929588	15929722	True	NM_032341,NM_024758	chr1,chr1	+,-	DDI2,AGMAT	14230,-17983
chr19:30097525-30099332	chr19	+	30097730	30099147	True	NM_001031726,NR_027368,NM_006627	chr19,chr19,chr19	-,+,+	C19orf12,POP4,POP4	106878,-613,-613
chr4:107209522-107210847	chr4	+	107209751	107210590	True	NM_001142415,NM_001163435	chr4,chr4	+,-	AIMP1,TBCK	26176,26890
chr19:13048053-13048545	chr19	+	13048228	13048528	True	NM_004461,NM_005053,NM_004343	chr19,chr19,chr19	-,+,+	FARSA,RAD23A,CALR	-3670,8125,885
chr2:242800574-242800792	chr2	+	242800636	242800834	True	NM_173821	chr2	+	C2orf85	11051
chr22:32811427-32812363	chr22	+	32811426	32812404	True	NM_014306,NM_012179,NM_001098535	chr22,chr22,chr22	-,+,+	C22orf28,FBXO7,RFPL3	-3152,58302,-57623
chr7:132262452-132263802	chr7	+	132262548	132263747	True	NM_001037126,NM_001105543,NM_020911	chr7,chr7,chr7	+,-,-	EXOC4,PLXNA4,PLXNA4	674075,-1225,-1225
chr15:25483260-25484039	chr15	+	25483270	25484030	True	NR_003344,NR_003358,NM_130838,NR_003353,NR_003352,NR_003351,NR_003350,NR_003357,NR_003356,NR_003355,NR_003354,NR_003347,NR_003302,NR_003303,NR_003348,NR_003349	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,-,+,+,+,+,+,+,+,+,+,+,+,+,+	SNORD115-29,SNORD115-43,UBE3A,SNORD115-38,SNORD115-37,SNORD115-36,SNORD115-35,SNORD115-42,SNORD115-41,SNORD115-40,SNORD115-39,SNORD115-32,SNORD115-10,SNORD115-11,SNORD115-33,SNORD115-34	-2089,-2089,166673,954,-188,-2089,-3927,8461,6594,4730,2862,-9207,8461,-2089,-7336,-5787
chr22:31356112-31356565	chr22	+	31356236	31356382	True	NM_014941,NR_002323	chr22,chr22	-,+	MORC2,TUG1	7869,9251
chr2:178078106-178078411	chr2	+	178078143	178078413	True	NM_194247,NR_036075	chr2,chr2	+,-	HNRNPA3,MIR3128	-772,42375
chr16:2058432-2058699	chr16	+	2058447	2058699	True	NM_178167,NM_001099456	chr16,chr16	-,+	ZNF598,NPW	1114,10821
chr6:167041221-167041432	chr6	+	167041267	167041369	True	NM_021135,NM_007045	chr6,chr6	-,+	RPS6KA2,FGFR1OP	-541,371446
chr8:39659205-39660501	chr8	+	39659277	39660517	True	NM_001464,NM_002164	chr8,chr8	-,+	ADAM2,IDO1	35313,110810
chr3:167160288-167160986	chr3	+	167160365	167160872	True	NM_006217,NM_001122752	chr3,chr3	-,+	SERPINI2,SERPINI1	31007,292559
chr1:162596438-162598138	chr1	+	162596503	162598141	True	NM_001014796,NM_006182,NM_053282	chr1,chr1,chr1	+,+,-	DDR2,DDR2,SH2D1B	4086,4086,-214575
chr17:41439992-41440721	chr17	+	41440356	41440714	True	NR_027412,NM_001661	chr17,chr17	-,+	LOC100130581,ARL4D	25602,35638
chr19:22194128-22195340	chr19	+	22194448	22195101	True	NM_007153,NM_033468	chr19,chr19	-,+	ZNF208,ZNF257	-703,40164
chr7:145813506-145813717	chr7	+	145813505	145813766	True	NR_031645,NM_014141	chr7,chr7	-,+	MIR548F4,CNTNAP2	1261497,-103
chr10:94351108-94351429	chr10	+	94351309	94351443	True	NM_004969,NM_004523	chr10,chr10	-,+	IDE,KIF11	-17457,1381
chr20:21093594-21095019	chr20	+	21093834	21095034	True	NM_033176,NM_001163022	chr20,chr20	-,+	NKX2-4,PLK1S1	283063,11589
chr5:71403107-71403318	chr5	+	71403256	71403352	True	NM_005909,NM_015084	chr5,chr5	+,-	MAP1B,MRPS27	-189,212782
chr17:39184316-39186217	chr17	+	39184401	39185983	True	NM_033061,NM_030966,NM_031957	chr17,chr17,chr17	+,-,-	KRTAP4-7,KRTAP1-3,KRTAP1-5	54475,5174,-947
chr9:115771001-115772081	chr9	+	115771017	115772131	True	NM_001101338,NR_024366	chr9,chr9	-,+	ZNF883,NCRNA00256A	2392,103044
chr11:12310198-12310596	chr11	+	12310232	12310552	True	NM_013253,NM_032867	chr11,chr11	-,+	DKK3,MICALCL	-279315,-1836
chr17:48047807-48048862	chr17	+	48047965	48048783	True	NM_001934,NM_005220,NM_138281	chr17,chr17,chr17	+,-,+	DLX4,DLX3,DLX4	1346,23855,-1454
chr19:19032501-19032707	chr19	+	19032511	19032711	True	NR_033677,NM_199444,NM_199442,NM_019070,NM_007263	chr19,chr19,chr19,chr19,chr19	+,-,-,+,-	DDX49,COPE,COPE,DDX49,COPE	-2078,-2312,-2312,-2078,-2312
chr1:235671004-235672589	chr1	+	235671011	235672256	True	NM_003193,NM_152490	chr1,chr1	+,-	TBCE,B3GALNT2	-140334,-3230
chr2:86115186-86115477	chr2	+	86115322	86115456	True	NM_003896,NM_032827	chr2,chr2	-,+	ST3GAL5,ATOH8	751,-134464
chr16:48646471-48647300	chr16	+	48646593	48647270	True	NM_153029,NM_031490	chr16,chr16	-,+	N4BP1,LONP2	-2473,-368433
chr18:48724325-48724672	chr18	+	48724340	48724702	True	NM_005359,NM_016626	chr18,chr18	+,-	SMAD4,MEX3C	-167808,-289
chrX:152225179-152225462	chrX	+	152225323	152225441	True	NM_032882,NM_013364	chrX,chrX	-,+	PNMA6A,PNMA3	20567,-608
chrX:77154946-77155718	chrX	+	77155031	77155522	True	NM_032121,NM_001866	chrX,chrX	-,+	MAGT1,COX7B	-3966,-121
chr3:51978531-51980062	chr3	+	51978856	51980060	True	NM_080865,NM_005485,NM_001003931,NM_004704	chr3,chr3,chr3,chr3	+,+,+,-	GPR62,PARP3,PARP3,RRP9	9269,-2546,-2546,-2934
chr6:47012114-47013586	chr6	+	47012299	47013331	True	NM_025048,NM_153840,NM_005588	chr6,chr6,chr6	-,-,+	GPR110,GPR110,MEP1A	-2217,-2217,-251263
chr22:24640019-24640684	chr22	+	24640061	24640575	True	NM_001099782,NM_001099781,NM_004121,NR_003714	chr22,chr22,chr22,chr22	-,-,-,+	GGT5,GGT5,GGT5,POM121L9P	585,585,585,7013
chr4:6991092-6992098	chr4	+	6991096	6991883	True	NM_153376,NM_001113363	chr4,chr4	-,+	CCDC96,TBC1D14	52906,-2258
chr2:113029434-113030368	chr2	+	113029544	113030353	True	NM_198581,NM_032494	chr2,chr2	+,-	ZC3H6,ZC3H8	2824,-16880
chr11:748322-748748	chr11	+	748325	748713	True	NM_006755,NM_182612	chr11,chr11	+,-	TALDO1,PDDC1	-944,28826
chr14:58863174-58863532	chr14	+	58863279	58863510	True	NM_012460,NM_207377	chr14,chr14	-,+	TIMM9,TOMM20L	30779,-686
chr2:23636781-23637133	chr2	+	23636786	23637114	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	512870,-28546
chr16:1833164-1833379	chr16	+	1833189	1833389	True	NM_080861,NM_012225	chr16,chr16	-,+	SPSB3,NUBP2	-608,-307
chr2:87303635-87303846	chr2	+	87303670	87303862	True	NR_026846,NM_001024457	chr2,chr2	-,+	LOC285074,RGPD1	-134,-158983
chr2:87303635-87303846	chr2	-	86947111	86947177	False	NM_022780,NM_001198954	chr2,chr2	+,-	RMND5A,RNF103-VPS24	236,1118
chr16:22306469-22306927	chr16	+	22306557	22306805	True	NM_018119,NM_001802	chr16,chr16	+,-	POLR3E,CDR2	1935,79191
chr9:132816542-132816756	chr9	+	132816638	132816794	True	NM_001136557,NM_015033,NM_020960,NM_001136558	chr9,chr9,chr9,chr9	+,-,+,+	GPR107,FNBP1,GPR107,GPR107	-704,-11165,-704,-704
chr1:208418035-208418644	chr1	+	208418214	208418662	True	NR_026817,NM_025179	chr1,chr1	+,-	LOC148696,PLXNA2	-426542,-549
chr9:139441526-139442155	chr9	+	139441690	139442110	True	NM_017617,NM_152571	chr9,chr9	-,+	NOTCH1,C9orf163	-1452,-63794
chr5:110426713-110427344	chr5	+	110426732	110427380	True	NM_139281,NM_001039763	chr5,chr5	+,-	WDR36,TMEM232	489,-364282
chrX:101409830-101410554	chrX	+	101409829	101410399	True	NM_001012978,NM_001159560,NM_080390	chrX,chrX,chrX	-,-,+	BEX5,BEX5,TCEAL2	637,413,-29222
chr11:74300815-74301470	chr11	+	74300975	74301272	True	NM_006591,NM_001144869	chr11,chr11	+,-	POLD3,LIPT2	2356,-96220
chr1:223097349-223098145	chr1	+	223097428	223098191	True	NM_032890,NM_022831	chr1,chr1	+,-	DISP1,AIDA	-109057,-211564
chr16:67260785-67261030	chr16	+	67260979	67261069	True	NM_014187,NM_012163,NM_001004055	chr16,chr16,chr16	+,-,-	TMEM208,LRRC29,LRRC29	-14,-258,-78
chr18:29599451-29599771	chr18	+	29599500	29599792	True	NM_014939,NM_017831	chr18,chr18	-,+	TRAPPC8,RNF125	-76409,-1106
chr9:34657510-34658363	chr9	+	34657541	34658399	True	NM_147162,NM_006664,NM_004512,NM_001142784	chr9,chr9,chr9,chr9	+,-,+,+	IL11RA,CCL27,IL11RA,IL11RA	-3660,4352,-3660,-5410
chr4:110837728-110838245	chr4	+	110837730	110838263	True	NM_001178131,NM_001178130,NM_001963,NM_000204	chr4,chr4,chr4,chr4	+,+,+,-	EGF,EGF,EGF,CFI	-3741,-3741,-3741,-114395
chr12:107169756-107171310	chr12	+	107169908	107171350	True	NM_001033050,NM_018157	chr12,chr12	-,+	MTERFD3,RIC8B	209629,-1560
chr19:7295379-7295880	chr19	+	7295389	7295595	True	NM_000208,NM_001079817,NM_015318	chr19,chr19,chr19	-,-,+	INSR,INSR,ARHGEF18	-1378,-1378,164403
chr9:95708241-95708523	chr9	+	95708289	95708537	True	NM_001083536,NM_031486	chr9,chr9	+,-	FGD3,ZNF484	1063,-67999
chr12:50452591-50453530	chr12	+	50452722	50453528	True	NM_020039,NM_001095,NM_013277	chr12,chr12,chr12	+,+,-	ACCN2,ACCN2,RACGAP1	-1286,-1286,-33415
chr17:61628674-61629127	chr17	+	61628677	61629074	True	NM_005828,NM_001915	chr17,chr17	+,-	DCAF7,CYB561	-906,-104955
chr19:37824286-37824831	chr19	+	37824290	37824628	True	NM_181786,NR_029390	chr19,chr19	+,-	HKR1,LOC284412	951,-64378
chr2:128642355-128642892	chr2	+	128642363	128642515	True	NM_032740,NM_031445,NM_001199140	chr2,chr2,chr2	+,-,-	SFT2D3,AMMECR1L,AMMECR1L	-183817,-5,1049
chr21:37757527-37757735	chr21	+	37757703	37757775	True	NM_012130,NM_005441	chr21,chr21	-,+	CLDN14,CHAF1B	81000,-65
chr1:113501095-113501683	chr1	+	113501430	113501621	True	NM_003051,NR_002796,NM_001166496	chr1,chr1,chr1	-,+,-	SLC16A1,AKR7A2P1,SLC16A1	-2455,-35513,-2745
chr1:228614017-228615076	chr1	+	228614021	228614493	True	NM_001024940,NM_003493,NM_001134855,NM_175055,NM_016102	chr1,chr1,chr1,chr1,chr1	-,-,-,+,-	TRIM17,HIST3H3,TRIM17,HIST3H2BB,TRIM17	-9438,-995,-9438,31314,-9438
chrX:77155786-77156605	chrX	+	77156008	77156653	True	NM_032121,NM_000052,NM_001866	chrX,chrX,chrX	-,+,+	MAGT1,ATP7A,COX7B	-4943,9540,-1098
chr12:120689542-120691307	chr12	+	120689687	120690955	True	NM_025157,NM_012240	chr12,chr12	-,+	PXN,SIRT4	-1730,49168
chr17:7902616-7904130	chr17	+	7902795	7903656	True	NM_000180,NR_030697	chr17,chr17	+,-	GUCY2D,TRAPPC1	2331,-67478
chr8:11988692-11989257	chr8	+	11989056	11989304	True	NM_201402,NR_003275,NR_027425	chr8,chr8,chr8	-,-,+	USP17L2,LOC392196,FAM66D	7015,-2252,-15816
chr20:38655438-38657314	chr20	+	38655544	38657217	True	NM_003286,NM_005461	chr20,chr20	+,-	TOP1,MAFB	1000244,660715
chr9:127962272-127962556	chr9	+	127962485	127962603	True	NM_002721,NM_001174153,NM_001174152,NM_005833	chr9,chr9,chr9,chr9	-,+,+,+	PPP6C,RABEPK,RABEPK,RABEPK	-10267,217,217,258
chr2:97481233-97481452	chr2	+	97481271	97481479	True	NM_017623,NM_144994,NM_199078	chr2,chr2,chr2	+,-,+	CNNM3,ANKRD23,CNNM3	511,28329,511
chr17:79763817-79764034	chr17	+	79763846	79764030	True	NM_000160,NM_001093767	chr17,chr17	+,-	GCGR,FAM195B	-1887,27187
chr8:144655445-144655694	chr8	+	144655623	144655743	True	NM_145201,NM_024736,NM_001100878	chr8,chr8,chr8	-,+,-	NAPRT1,GSDMD,C8orf73	4820,-15197,-695
chrX:100334439-100335934	chrX	+	100334452	100335926	True	NM_021637,NM_024917	chrX,chrX	+,-	TMEM35,TRMT2B	-675,-27347
chr3:21708947-21710251	chr3	+	21709190	21710117	True	NR_002311,NM_024697	chr3,chr3	+,-	VENTXP7,ZNF385D	-262029,82749
chr2:50560430-50562118	chr2	+	50560591	50562096	True	NM_138735,NM_006872	chr2,chr2	-,+	NRXN1,GTF2A1L	12849,-1715713
chr9:139653685-139654465	chr9	+	139653716	139654402	True	NM_203347,NM_178469,NR_033913	chr9,chr9,chr9	-,-,+	LCN15,LCN8,LOC100128593	4613,-985,-13154
chr3:108380510-108382123	chr3	+	108380704	108382130	True	NM_020890,NM_014648	chr3,chr3	-,+	KIAA1524,DZIP3	-72213,-72418
chr22:39019314-39020264	chr22	+	39019605	39020052	True	NM_001002880,NM_001013647	chr22,chr22	+,-	CBY1,LOC646851	32605,32632
chr5:180687154-180687825	chr5	+	180687211	180687853	True	NM_201627	chr5	+	TRIM41	-36956
chr15:41184937-41186432	chr15	+	41184993	41186301	True	NM_020857,NM_133639	chr15,chr15	+,-	VPS18,RHOV	326,-18506
chr16:21512096-21512478	chr16	+	21512096	21512500	True	NM_001077180,NR_027155	chr16,chr16	+,-	METTL9,LOC100271836	98355,1152
chr16:21512096-21512478	chr16	+	30345585	30345701	False	NR_002453,NM_013292	chr16,chr16	-,+	LOC595101,MYLPF	1044,40421
chr16:21512096-21512478	chr16	+	29605337	29605613	False	NR_002593,NM_001030288	chr16,chr16	-,+	SLC7A5P1,SPN	19475,68686
chr16:21512096-21512478	chr16	+	18936628	18936678	False	NM_015092,NM_024847	chr16,chr16	-,+	SMG1,TMC7	1098,58577
chr16:21512096-21512478	chr16	-	22449382	22449786	False	NR_027154,NR_027460	chr16,chr16	+,-	LOC641298,RRN3P3	-1104,-346
chr19:36499035-36499444	chr19	+	36499200	36499332	True	NM_198867,NM_032878,NM_001039876,NM_001042631	chr19,chr19,chr19,chr19	-,-,-,+	ALKBH6,ALKBH6,C19orf46,SDHAF1	5859,5859,390,-13161
chr7:63695509-63696364	chr7	+	63695585	63695875	True	NM_178558,NM_153363	chr7,chr7	-,+	ZNF680,ZNF679	327687,-6790
chr13:25258090-25259767	chr13	+	25258261	25259534	True	NM_001185085,NM_006437,NM_001676	chr13,chr13,chr13	+,-,+	ATP12A,PARP4,ATP12A	-3763,-171313,-3763
chr19:30100785-30101232	chr19	+	30100872	30101200	True	NM_001031726,NR_027368,NM_006627	chr19,chr19,chr19	-,+,+	C19orf12,POP4,POP4	104813,-3754,-3754
chr5:172482186-172483122	chr5	+	172482327	172483079	True	NM_001168393,NR_026682,NM_001168394,NM_153607	chr5,chr5,chr5,chr5	+,-,+,+	C5orf41,LOC100268168,C5orf41,C5orf41	275,-95956,275,275
chr16:2825455-2825766	chr16	+	2825519	2825816	True	NM_001135086,NM_007108,NM_207013	chr16,chr16,chr16	+,-,-	PRSS41,TCEB2,TCEB2	22669,1533,1533
chr11:68039877-68040269	chr11	+	68039943	68040113	True	NM_022338,NM_002335	chr11,chr11	-,+	C11orf24,LRP5	-474,39994
chr5:130597465-130599401	chr5	+	130597624	130599237	True	NR_024610,NM_001038702,NM_020240	chr5,chr5,chr5	-,+,+	HINT1,CDC42SE2,CDC42SE2	-96590,464,464
chr11:130184820-130185626	chr11	+	130184924	130185588	True	NM_014155,NM_139055	chr11,chr11	-,+	ZBTB44,ADAMTS15	-317,133280
chr6:147525368-147525596	chr6	+	147525468	147525528	True	NM_001127715,NM_139244,NR_034115	chr6,chr6,chr6	+,+,-	STXBP5,STXBP5,LOC729178	-11,-11,272
chr20:62282829-62283382	chr20	+	62282938	62283194	True	NM_015894,NM_016434,NR_037882,NM_032957	chr20,chr20,chr20,chr20	-,+,+,+	STMN3,RTEL1,RTEL1-TNFRSF6B,RTEL1	1636,5968,5968,5968
chr15:83317556-83317798	chr15	+	83317619	83317824	True	NM_030594,NR_003011	chr15,chr15	-,+	CPEB1,SCARNA15	-891,106872
chr4:106068991-106070956	chr4	+	106069071	106070978	True	NM_001127208,NM_006903,NM_017628	chr4,chr4,chr4	+,-,+	TET2,PPA2,TET2	-1287,324299,-2097
chr12:70074247-70075116	chr12	+	70074424	70075126	True	NM_022456,NM_152439	chr12,chr12	+,-	RAB3IP,BEST3	57504,7984
chr9:139652530-139652921	chr9	+	139652534	139652960	True	NM_203347,NM_178469,NR_033913,NM_198946	chr9,chr9,chr9,chr9	-,-,+,-	LCN15,LCN8,LOC100128593,LCN6	6055,-85,-11972,-9554
chrY:4982772-4983872	chrY	+	4982847	4983782	True	NM_032973,NR_001540	chrY,chrY	+,-	PCDH11Y,TTTY23	-58779,1127919
chrY:4982772-4983872	chrX	+	91148019	91148468	False	NM_001168363,NM_004538	chrX,chrX	+,-	PCDH11X,NAP1L3	-57622,1780264
chr17:53341060-53341856	chr17	+	53341209	53341812	True	NM_002126,NM_012329	chr17,chr17	+,-	HLF,MMD	508,157583
chr10:105004001-105004468	chr10	+	105004274	105004472	True	NM_012229,NM_001143909	chr10,chr10	-,+	NT5C2,LOC729020	-51218,1171
chr19:8073310-8074256	chr19	+	8073536	8073870	True	NM_001419,NM_001201359	chr19,chr19	-,+	ELAVL1,CCL25	-3007,43775
chr2:209327224-209327585	chr2	+	209327256	209327560	True	NM_005896,NM_005048	chr2,chr2	-,+	IDH1,PTH2R	-207450,-55759
chr4:20255928-20256241	chr4	+	20255934	20256016	True	NM_147181,NM_004787	chr4,chr4	-,+	KCNIP4,SLIT2	596325,-750
chr1:156830107-156830413	chr1	+	156830156	156830414	True	NM_001012331,NM_002529,NM_014215	chr1,chr1,chr1	+,+,-	NTRK1,NTRK1,INSRR	256,256,-1444
chr3:6904599-6905029	chr3	+	6904710	6905030	True	NM_000844,NR_033378,NM_181874	chr3,chr3,chr3	+,-,+	GRM7,LOC100288428,GRM7	-1959,1638364,-1959
chr3:192404701-192405362	chr3	+	192405162	192405328	True	NM_020386,NM_004113	chr3,chr3	+,-	HRASLS,FGF12	553589,40110
chr12:66581146-66582319	chr12	+	66581503	66582309	True	NM_016056,NM_007199,NM_001142523	chr12,chr12,chr12	-,+,+	TMBIM4,IRAK3,IRAK3	-17696,668,668
chr1:36107258-36107553	chr1	+	36107273	36107560	True	NM_178548,NM_001199779,NM_002794	chr1,chr1,chr1	+,-,-	TFAP2E,PSMB2,PSMB2	-68360,-121,-58
chr12:6235083-6235756	chr12	+	6235300	6235563	True	NM_001769,NM_000552	chr12,chr12	+,-	CD9,VWF	73918,-1464
chr22:51200474-51201262	chr22	+	51200475	51200850	True	NM_001003789,NR_026981	chr22,chr22	-,+	RABL2B,RPL23AP82	21294,-5020
chr22:51200474-51201262	chr2	-	114406186	114406300	False	NR_024531,NM_013412	chr2,chr2	-,+	RPL23AP7,RABL2A	-21471,-21428
chr22:24110266-24110531	chr22	+	24110337	24110411	True	NM_213720,NM_005940,NM_182520	chr22,chr22,chr22	-,+,+	CHCHD10,MMP11,C22orf15	-196,4624,-5180
chr7:29514057-29515872	chr7	+	29514224	29515740	True	NM_001039936,NR_024278	chr7,chr7	+,-	CHN2,LOC646762	3745,209066
chr11:71256574-71257986	chr11	+	71256787	71257819	True	NM_021046,NM_005553,NM_001005405	chr11,chr11,chr11	+,+,-	KRTAP5-8,KRTAP5-9,KRTAP5-11	-7767,1646,36152
chr2:96260178-96262003	chr2	+	96260215	96261932	True	NM_001164464,NM_138800	chr2,chr2	-,+	TRIM43B,TRIM43	-109736,-2512
chr2:96260178-96262003	chr2	-	96146883	96147234	False	NM_001164464,NM_016044	chr2,chr2	-,+	TRIM43B,FAHD2A	3301,-78486
chr5:175965027-175965439	chr5	+	175965034	175965458	True	NM_001171976,NM_014901	chr5,chr5	+,-	CDHR2,RNF44	4053,-613
chr7:63590919-63591439	chr7	+	63590954	63591441	True	NM_001159524,NM_178558	chr7,chr7	+,-	ZNF735,ZNF680	76139,432121
chr17:40191887-40192159	chr17	+	40192022	40192094	True	NM_017595,NR_029431	chr17,chr17	+,-	NKIRAS2,DNAJC7	-19986,-22307
chr5:178014799-178015209	chr5	+	178014809	178015211	True	NM_173465,NM_058230	chr5,chr5	-,+	COL23A1,ZNF354B	2395,271742
chr3:23858767-23860495	chr3	+	23859087	23860172	True	NM_001202476,NM_020345	chr3,chr3	+,-	UBE2E1,NKIRAS1	-7205,98416
chr10:70848920-70849371	chr10	+	70849074	70849218	True	NM_001057,NR_036430,NM_002727	chr10,chr10,chr10	-,+,+	TACR2,SRGN,SRGN	327506,-1304,-1304
chr6:49708668-49709061	chr6	+	49708916	49709089	True	NM_006061,NM_001145652,NM_001190986	chr6,chr6,chr6	-,+,-	CRISP3,C6orf141,CRISP3	3138,-190855,3120
chr5:149320586-149321188	chr5	+	149320613	149321223	True	NM_000440,NM_000112	chr5,chr5	-,+	PDE6A,SLC26A2	3183,19076
chr17:67005496-67006713	chr17	+	67005619	67006577	True	NM_080283,NM_002758	chr17,chr17	-,+	ABCA9,MAP2K6	50616,404260
chr17:40087305-40087662	chr17	+	40087453	40087693	True	NM_198830,NM_031421	chr17,chr17	-,+	ACLY,TTC25	-12181,-616
chr18:33876329-33876854	chr18	+	33876403	33876662	True	NM_001099406,NM_025135	chr18,chr18	-,+	SLC39A6,FHOD3	-167046,1039
chr6:126293892-126294311	chr6	+	126294025	126294213	True	NM_016063,NM_001031712	chr6,chr6	-,+	HDDC2,TRMT11	-670743,13362
chr22:25425717-25426223	chr22	+	25425745	25426177	True	NM_001001663,NM_001145206	chr22,chr22	-,+	TMEM211,KIAA1671	-90431,-1855
chr11:2987053-2988562	chr11	+	2987119	2988253	True	NM_002555,NR_002982	chr11,chr11	+,-	SLC22A18,SNORA54	-63658,-1996
chr12:52627261-52627648	chr12	+	52627336	52627688	True	NM_182507,NM_005556	chr12,chr12	-,+	KRT80,KRT7	-41552,-433
chr13:32316388-32317847	chr13	+	32316465	32317725	True	NM_130806,NM_001166058,NM_001136571	chr13,chr13,chr13	+,+,-	RXFP2,RXFP2,ZAR1L	-2837,-2837,568423
chr4:81106100-81106325	chr4	+	81106162	81106336	True	NM_020226,NM_001145794	chr4,chr4	+,-	PRDM8,ANTXR2	87,-111685
chr8:145979160-145979466	chr8	+	145979165	145979471	True	NM_138367,NM_213605	chr8,chr8	-,+	ZNF251,ZNF517	1549,44789
chr14:56065007-56066314	chr14	+	56065168	56066105	True	NR_027123,NM_182926	chr14,chr14	-,+	C14orf33,KTN1	-18358,-18302
chrX:110420056-110420848	chrX	+	110420269	110420874	True	NM_001128173,NM_014289	chrX,chrX	+,-	PAK3,CAPN6	-54024,92963
chr6:88299766-88301572	chr6	+	88299859	88301302	True	NM_020320,NM_181837,NM_012381,NM_001197259	chr6,chr6,chr6,chr6	-,+,+,+	RARS2,ORC3,ORC3,ORC3	-124,-125,-125,-125
chr10:76857612-76858826	chr10	+	76857745	76858647	True	NM_016364,NM_001174156	chr10,chr10	-,+	DUSP13,SAMD8	651,12745
chr3:173115265-173115508	chr3	+	173115270	173115526	True	NM_014932,NM_031955	chr3,chr3	+,-	NLGN1,SPATA16	717,-256212
chr5:108744942-108745304	chr5	+	108745007	108745339	True	NM_014819,NM_002372	chr5,chr5	-,+	PJA2,MAN2A1	386,279816
chr1:182454339-182455208	chr1	+	182454634	182455256	True	NM_172000,NM_001137669	chr1,chr1	-,+	TEDDM1,RGSL1	-84883,-35429
chr3:25791040-25792648	chr3	+	25791068	25792683	True	NM_001145391,NM_001145293	chr3,chr3	+,-	OXSM,NGLY1	38879,32356
chr2:34092590-34093176	chr2	+	34092629	34093030	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-353745,-139345
chr8:128746069-128747133	chr8	+	128746068	128746933	True	NM_002467,NR_024393	chr8,chr8	+,-	MYC,LOC727677	1381,-251684
chr11:65265525-65265865	chr11	+	65265524	65265792	True	NR_002819,NM_001130144	chr11,chr11	+,-	MALAT1,LTBP3	-342,59957
chr12:72091143-72092648	chr12	+	72091149	72092666	True	NM_018279,NM_144982	chr12,chr12	+,-	TMEM19,ZFC3H1	-11322,-33400
chr11:62342675-62343435	chr11	+	62342715	62343295	True	NM_001404,NM_000327	chr11,chr11	-,+	EEF1G,ROM1	-1255,36917
chr4:100537529-100538714	chr4	+	100537579	100538733	True	NM_001134666,NM_000253	chr4,chr4	-,+	RG9MTD2,MTTP	-52390,-52390
chr10:105156610-105156827	chr10	+	105156766	105156878	True	NM_014976,NR_031707,NM_032747	chr10,chr10,chr10	+,-,-	PDCD11,MIR1307,USMG5	-410,-2608,-543
chr11:33565912-33566687	chr11	+	33565940	33566608	True	NM_012194,NM_001166692	chr11,chr11	+,-	C11orf41,C11orf91	-2114,155728
chrX:24330068-24331654	chrX	+	24330335	24331545	True	NM_001136233,NM_001136234	chrX,chrX	-,+	FAM48B2,FAM48B1	-63,49332
chr7:44517869-44518751	chr7	+	44518197	44518676	True	NM_015332,NM_001003941	chr7,chr7	-,+	NUDCD3,OGDH	11759,127444
chr7:131347351-131348868	chr7	+	131347590	131348819	True	NM_005397,NM_013255	chr7,chr7	-,+	PODXL,MKLN1	-106214,-335046
chr20:43851112-43853053	chr20	+	43851356	43852826	True	NM_003064,NM_003008	chr20,chr20	-,+	SLPI,SEMG2	30430,-1398
chr20:2488522-2488996	chr20	+	2488590	2488916	True	NM_024325,NM_080751	chr20,chr20	-,+	ZNF343,TMC2	912,28336
chr19:18304636-18305279	chr19	+	18304652	18305266	True	NM_002866,NM_032683	chr19,chr19	-,+	RAB3A,MPV17L2	9658,-663
chr9:33025553-33025768	chr9	+	33025552	33025813	True	NM_001539,NR_036577	chr9,chr9	+,-	DNAJA1,APTX	-394,-23913
chr11:62369381-62369650	chr11	+	62369385	62369633	True	NM_004739,NM_000327	chr11,chr11	-,+	MTA2,ROM1	-82,10579
chr17:42926438-42926661	chr17	+	42926511	42926707	True	NM_016438,NM_001080383	chr17,chr17	+,-	HIGD1B,GJC1	-1283,-18332
chr10:126485935-126486891	chr10	+	126486130	126486926	True	NM_032182,NM_212554	chr10,chr10	+,-	FAM175B,METTL10	3427,-5691
chr2:203157283-203158591	chr2	+	203157350	203158640	True	NM_003352,NR_003694,NR_003031	chr2,chr2,chr2	-,+,+	SUMO1,SNORD11B,SNORD11	-54028,-1361,-16
chr1:158151202-158151536	chr1	+	158151274	158151530	True	NR_033946,NM_001766	chr1,chr1	-,+	LOC646268,CD1D	-40844,-1588
chr2:88989903-88990248	chr2	+	88989967	88990283	True	NM_144563,NM_004836	chr2,chr2	+,-	RPIA,EIF2AK3	892,-62873
chr6:25925663-25927014	chr6	+	25925877	25926706	True	NM_006355,NM_005835	chr6,chr6	+,-	TRIM38,SLC17A2	36364,4291
chr18:67621436-67622823	chr18	+	67621466	67622622	True	NM_006566,NM_004232	chr18,chr18	-,+	CD226,SOCS6	1660,333514
chr9:136342334-136343103	chr9	+	136342571	136343009	True	NM_017586,NM_001145099,NM_017585	chr9,chr9,chr9	+,-,-	C9orf7,SLC2A6,SLC2A6	-17535,1317,1317
chrX:48914077-48915350	chrX	+	48914180	48915020	True	NM_001163321,NM_001163322,NM_001163323,NM_006521,NM_033626	chrX,chrX,chrX,chrX,chrX	+,+,+,-,+	CCDC120,CCDC120,CCDC120,TFE3,CCDC120	1502,1495,1502,-13190,1495
chr15:28579293-28579959	chr15	+	28579414	28579957	True	NM_004667,NR_033351	chr15,chr15	-,+	HERC2,GOLGA8F	-12119,43826
chr15:28579293-28579959	chr15	-	28821962	28822505	False	NR_036443,NR_033351	chr15,chr15	+,-	HERC2P9,GOLGA8F	77082,-43819
chr15:28579293-28579959	chr15	+	20723532	20724076	False	NR_036432,NR_027411	chr15,chr15	-,+	HERC2P3,GOLGA8C	-12099,43597
chr15:28579293-28579959	chr15	+	23390338	23390869	False	NR_036470,NR_002824	chr15,chr15	+,-	HERC2P7,HERC2P2	-26,-12079
chr15:28579293-28579959	chr15	+	23678025	23678568	False	NM_005664,NM_019066	chr15,chr15	+,-	MKRN3,MAGEL2	131885,214475
chr1:162467347-162467598	chr1	+	162467351	162467641	True	NM_175866,NM_053282,NM_144624,NM_001184763	chr1,chr1,chr1,chr1	+,-,+,+	UHMK1,SH2D1B,UHMK1,UHMK1	-47,-85423,-47,-438
chr12:64798801-64799689	chr12	+	64798902	64799265	True	NM_001170633,NM_007235	chr12,chr12	-,+	C12orf56,XPOT	-14557,-800
chr1:153917629-153918284	chr1	+	153917842	153918154	True	NM_130898,NM_014856	chr1,chr1	+,-	CREB3L4,DENND4B	22242,1050
chr2:20865550-20865810	chr2	+	20865598	20865784	True	NM_022460,NM_182828	chr2,chr2	-,+	HS1BP3,GDF7	-14734,639
chr8:53320929-53321680	chr8	+	53321004	53321698	True	NM_014682,NM_005285	chr8,chr8	-,+	ST18,NPBWR1	791,530769
chr4:286268-286555	chr4	+	286358	286539	True	NM_001137608,NM_003441	chr4,chr4	-,+	ZNF732,ZNF141	3470,45056
chr19:49537364-49537767	chr19	+	49537456	49537546	True	NM_000737,NM_033378,NR_004383,NM_033377,NR_024244,NM_033043	chr19,chr19,chr19,chr19,chr19,chr19	-,+,+,-,-,+	CGB,CGB2,SNAR-G1,CGB1,SNAR-G2,CGB5	-9863,-2377,2730,2695,-2412,9555
chr19:49537364-49537767	chr19	-	49549832	49549934	False	NR_004383,NM_033183,NM_033377,NM_033142,NM_033043	chr19,chr19,chr19,chr19,chr19	+,-,-,-,+	SNAR-G1,CGB8,CGB1,CGB7,CGB5	-9624,2484,-9641,9113,-2799
chrX:46989880-46991707	chrX	+	46990163	46991094	True	NM_001204466,NM_001135998	chrX,chrX	+,-	RBM10,NDUFB11	13522,13060
chr4:174451436-174451830	chr4	+	174451479	174451812	True	NR_003679,NM_021973	chr4,chr4	+,-	NBLA00301,HAND2	59,-101
chr11:12393937-12394290	chr11	+	12393940	12394124	True	NM_018222,NM_013253	chr11,chr11	+,-	PARVA,DKK3	4901,-363023
chr22:21124520-21126167	chr22	+	21124971	21125827	True	NM_002650,NM_000185	chr22,chr22	-,+	PI4KA,SERPIND1	-36016,2555
chr16:32939183-32939531	chr16	+	32939278	32939410	True	NR_003083,NM_016212	chr16,chr16	-,+	SLC6A10P,TP53TG3	-42815,265569
chr16:32939183-32939531	chr16	+	31995786	31995858	False	NR_002827,NM_003414	chr16,chr16	-,+	HERC2P4,ZNF267	168066,-110760
chr16:32939183-32939531	chr16	-	33728205	33728337	False	NR_033866,NM_001205265	chr16,chr16	-,+	LOC390705,TP53TG3B	-429503,-466136
chr16:8619124-8619729	chr16	+	8619188	8619552	True	NM_001146336,NM_024109	chr16,chr16	-,+	TMEM114,METTL22	2724,95974
chr12:121415925-121416484	chr12	+	121415968	121416343	True	NR_024345,NM_000545	chr12,chr12	-,+	NCRNA00262,HNF1A	-5873,205
chr12:113229633-113229999	chr12	+	113229703	113230011	True	NM_014954,NM_001143854,NM_001193521	chr12,chr12,chr12	+,+,-	RPH3A,RPH3A,RASAL1	-205,-205,343598
chr15:67835454-67835776	chr15	+	67835699	67835795	True	NM_002757,NM_145160,NM_024666	chr15,chr15,chr15	+,+,-	MAP2K5,MAP2K5,AAGAB	-729,-729,-288625
chr1:6260058-6260614	chr1	+	6260062	6260604	True	NM_000983,NM_207396	chr1,chr1	-,+	RPL22,RNF207	-383,5584
chr3:121264940-121265957	chr3	+	121265096	121265928	True	NM_199420,NM_001012659	chr3,chr3	-,+	POLQ,ARGFX	-243,20849
chr11:8061698-8062026	chr11	+	8061713	8061981	True	NM_003320,NM_176821	chr11,chr11	+,-	TUB,NLRP10	-1584,-76654
chr1:32041169-32042127	chr1	+	32041208	32042008	True	NM_001204414,NM_001204415,NM_022164,NR_033688	chr1,chr1,chr1,chr1	+,+,+,-	TINAGL1,TINAGL1,TINAGL1,PEF1	77,1737,77,68260
chr11:49452862-49453986	chr11	+	49452959	49453902	True	NR_027044,NM_004476	chr11,chr11	+,-	LOC440040,FOLH1	126177,-222737
chr14:102603753-102605379	chr14	+	102603950	102605379	True	NM_144574,NM_181308,NM_181302,NM_001017963,NM_181291	chr14,chr14,chr14,chr14,chr14	+,+,+,-,+	WDR20,WDR20,WDR20,HSP90AA1,WDR20	832,832,832,764,832
chr12:4757900-4758258	chr12	+	4757988	4758230	True	NM_006422,NM_005002	chr12,chr12	-,+	AKAP3,NDUFA9	-3645,33
chr15:44955966-44957030	chr15	+	44956070	44956790	True	NM_004048,NM_001160227,NM_025137	chr15,chr15,chr15	+,-,-	B2M,SPG11,SPG11	46894,-194,-194
chr1:40916101-40916872	chr1	+	40916145	40916889	True	NM_023070,NM_001852	chr1,chr1	+,-	ZNF643,COL9A2	45,-133206
chr17:8153307-8155148	chr17	+	8153318	8154967	True	NM_025099,NM_012393	chr17,chr17	-,+	CTC1,PFAS	-1905,-773
chr1:6264170-6264754	chr1	+	6264326	6264429	True	NM_000983,NM_207396	chr1,chr1	-,+	RPL22,RNF207	-4647,1759
chr2:10222852-10224635	chr2	+	10223057	10224613	True	NM_001165931,NM_001177718,NM_001037160	chr2,chr2,chr2	+,+,-	RRM2,KLF11,CYS1	38081,-38736,-2519
chr1:162617181-162617937	chr1	+	162617212	162617971	True	NM_178550,NM_006182	chr1,chr1	-,+	C1orf110,DDR2	220689,-15035
chr12:2986581-2987192	chr12	+	2986747	2986953	True	NR_027364,NR_027365,NM_202002,NR_027363,NM_202003,NM_021953	chr12,chr12,chr12,chr12,chr12,chr12	+,+,-,+,-,-	C12orf32,C12orf32,FOXM1,C12orf32,FOXM1,FOXM1	-433,-433,-444,-433,-444,-444
chr17:8155148-8155812	chr17	+	8155644	8155714	True	NM_025099,NM_012393	chr17,chr17	-,+	CTC1,PFAS	-4231,-3113
chr9:72376310-72376600	chr9	+	72376386	72376603	True	NM_001099666,NM_001010940	chr9,chr9	-,+	PTAR1,C9orf135	-1510,59127
chr16:47152444-47153221	chr16	+	47152443	47153016	True	NM_001142466,NM_001201477	chr16,chr16	+,-	GPT2,NETO2	-233398,24977
chr3:158782785-158784682	chr3	+	158783035	158784499	True	NM_002888,NM_001042706,NM_001042705,NM_001197100,NM_001197113,NM_001197114	chr3,chr3,chr3,chr3,chr3,chr3	-,+,+,+,+,+	RARRES1,IQCJ,IQCJ,IQCJ,IQCJ-SCHIP1,IQCJ-SCHIP1	-332760,2541,2541,2541,2541,2541
chr4:74574063-74575998	chr4	+	74574141	74575963	True	NM_000584,NM_201431	chr4,chr4	+,-	IL8,RASSF6	30259,-87801
chr7:5001109-5002048	chr7	+	5001377	5001437	True	NM_198403,NR_015449,NM_001100600	chr7,chr7,chr7	-,+,-	MMD2,RNF216L,MMD2	-2533,12178,-2533
chr13:53422830-53423761	chr13	+	53423019	53423799	True	NR_031582,NM_032949,NM_002590	chr13,chr13,chr13	+,-,-	MIR759,PCDH8,PCDH8	-38885,-244,-244
chr19:35457460-35458600	chr19	+	35457708	35458496	True	NM_001136199,NM_175872	chr19,chr19	+,-	GRAMD1A,ZNF792	32749,-2755
chr11:6438185-6439519	chr11	+	6438266	6439505	True	NM_001164,NM_145689,NM_001007593	chr11,chr11,chr11	-,-,+	APBB1,APBB1,SMPD1	846,1190,-26673
chr16:66597641-66598464	chr16	+	66597644	66598173	True	NM_181270,NM_181271,NM_181272,NM_181283,NM_181268,NM_181296,NM_004614,NM_181269,NM_052999	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,+,-,+,+	CMTM1,CMTM1,CMTM1,CMTM1,CMTM1,CMTM1,TK2,CMTM1,CMTM1	2120,2120,2120,2120,2176,2120,-13329,2120,2176
chr11:27741975-27742257	chr11	+	27741991	27742281	True	NM_170731,NR_033315,NM_170732,NM_001143805,NM_001143807,NM_001143806	chr11,chr11,chr11,chr11,chr11,chr11	-,+,-,-,-,-	BDNF,BDNF-AS1,BDNF,BDNF,BDNF,BDNF	1374,-213643,95,95,-697,95
chr13:49081299-49082322	chr13	+	49081419	49082314	True	NM_001268,NM_020377	chr13,chr13	-,+	RCBTB2,CYSLTR2	25052,198636
chr1:1710616-1710963	chr1	+	1710726	1710888	True	NM_001198993,NR_002946,NM_023018,NM_001198994	chr1,chr1,chr1,chr1	-,+,-,-	NADK,MMP23A,NADK,NADK	-429,-79399,-817,670
chr19:39441590-39442681	chr19	+	39441774	39442628	True	NM_148169,NM_033363	chr19,chr19	-,+	FBXO17,MRPS12	749,-20231
chr20:33135823-33136232	chr20	+	33135840	33136224	True	NM_080476,NM_181509	chr20,chr20	-,+	PIGU,MAP1LC3A	128915,-1199
chr18:20715221-20715433	chr18	+	20715287	20715407	True	NM_001100619,NR_023359,NM_032933	chr18,chr18,chr18	+,+,-	CABLES1,CABLES1,C18orf45	319,-810,302568
chr18:52613047-52614310	chr18	+	52613089	52614350	True	NM_004163,NM_001143829	chr18,chr18	+,-	RAB27B,CCDC68	-117301,10979
chr10:81443756-81444392	chr10	+	81443823	81444441	True	NR_027512,NM_001098668	chr10,chr10	+,-	LOC650623,SFTPA2	-1143,-123660
chr3:53915235-53915730	chr3	+	53915235	53915713	True	NM_022899,NM_018725	chr3,chr3	-,+	ACTR8,IL17RB	566,-34709
chr1:177112228-177113358	chr1	+	177112266	177113372	True	NM_004319,NM_021165	chr1,chr1	-,+	ASTN1,FAM5B	20702,27260
chr21:26797826-26799094	chr21	+	26797825	26799137	True	NR_024027,NR_001458	chr21,chr21	-,+	NCRNA00158,MIR155HG	4932,135319
chr4:70998892-70999330	chr4	+	70999196	70999308	True	NR_033311,NM_001891	chr4,chr4	+,-	CSN1S2BP,CSN2	12,-172470
chr14:20097508-20098163	chr22	+	16365459	16365667	False	NR_001591,NM_001136213	chr22,chr22	+,-	psiTPTE22,POTEH	717133,-77522
chr14:20097508-20098163	chr2	-	131935719	131935775	True	NM_001009993,NM_001083538	chr2,chr2	-,+	FAM168B,POTEE	-84715,40148
chr18:56887689-56887926	chr18	+	56887709	56887892	True	NM_013435,NM_001012512,NM_001012513,NM_002091	chr18,chr18,chr18,chr18	-,+,+,+	RAX,GRP,GRP,GRP	52783,-360,-360,-360
chr13:51931282-51932280	chr13	+	51931348	51932171	True	NM_001039937,NM_001101320	chr13,chr13	-,+	INTS6,SERPINE3	95167,-16239
chr10:74874655-74876312	chr10	+	74874655	74876230	True	NM_001142596,NM_015901	chr10,chr10	-,+	P4HA1,NUDT13	-17923,-4505
chr18:21980384-21981270	chr18	+	21980421	21981209	True	NM_080597,NM_018439	chr18,chr18	-,+	OSBPL1A,IMPACT	-2631,25399
chr3:9836037-9836949	chr3	+	9836377	9836693	True	NM_001024959,NM_001024960,NM_133480,NM_006354,NM_005718,NM_001198793,NM_001198780	chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,-,-,+,+,+	ARPC4,ARPC4,TADA3,TADA3,ARPC4,ARPC4-TTLL3,ARPC4	-2251,-2251,-1957,-1957,-2198,-2198,-1629
chr12:29906350-29906778	chr12	+	29906526	29906794	True	NM_018099,NM_001193451	chr12,chr12	+,-	FAR2,TMTC1	-529979,29999
chr3:53082530-53083251	chr3	+	53082773	53082951	True	NM_016329,NM_006254,NM_001005158,NM_001005159	chr3,chr3,chr3,chr3	-,+,-,-	SFMBT1,PRKCD,SFMBT1,SFMBT1	-2684,112271,-2684,-3438
chr9:136604171-136604397	chr9	+	136604262	136604435	True	NM_007101,NM_000787,NM_001134707	chr9,chr9,chr9	-,+,-	SARDH,DBH,SARDH	693,-102829,-783
chr16:30378371-30379027	chr16	+	30378551	30379039	True	NM_013292,NM_015527	chr16,chr16	+,-	MYLPF,TBC1D10B	7083,2533
chr5:145718493-145718714	chr5	+	145718589	145718751	True	NM_020117,NM_002700	chr5,chr5	-,+	LARS,POU4F3	-156295,-53
chr4:8596031-8596590	chr4	+	8596158	8596499	True	NM_001014447,NM_003501,NM_001014448,NM_003652	chr4,chr4,chr4,chr4	+,-,+,+	CPZ,ACOX3,CPZ,CPZ	-1822,-153706,-1822,-1822
chr2:131439116-131439508	chr2	+	131439132	131439498	True	NR_023391,NM_001079530	chr2,chr2	+,-	C2orf14,CFC1B	-1561,-81881
chr2:131439116-131439508	chr2	+	132045840	132046206	False	NR_030728,NM_001077637	chr2,chr2	+,-	LOC440910,LOC150786	-9029,75575
chr2:131439116-131439508	chr2	-	131197172	131197538	False	NM_032357,NM_001079530	chr2,chr2	-,+	CCDC115,CFC1B	-97250,81128
chr2:131439116-131439508	chr2	-	130806313	130806679	False	NR_026758,NM_032144	chr2,chr2	-,+	LOC440905,RAB6C	2076,-69129
chr14:24583538-24584004	chr14	+	24583656	24583965	True	NM_016049,NM_001163484,NM_181357,NR_028100,NR_028099,NM_025230	chr14,chr14,chr14,chr14,chr14,chr14	-,+,+,+,+,+	FAM158A,DCAF11,DCAF11,DCAF11,DCAF11,DCAF11	26882,-60,528,526,20,20
chr15:65911823-65912711	chr15	+	65911826	65912659	True	NM_030800,NM_001136043,NM_004727	chr15,chr15,chr15	-,-,+	C15orf44,C15orf44,SLC24A1	-8419,-8357,1610
chr17:79680069-79680801	chr17	+	79680084	79680801	True	NM_001040025,NM_002949,NM_012140	chr17,chr17,chr17	-,+,+	ARL16,MRPL12,SLC25A10	-29130,-9735,-764
chr3:125316276-125318101	chr3	+	125316515	125317658	True	NM_022776,NR_024250	chr3,chr3	-,+	OSBPL11,LOC100125556	-2134,317785
chr9:42468328-42469245	chr9	+	42468332	42469111	True	NR_003670,NR_026759	chr9,chr9	-,+	KGFLP2,FAM95B1	-448748,206
chr9:42468328-42469245	chr9	+	69476362	69476412	False	NM_001085457,NM_001098805	chr9,chr9	-,+	CBWD6,ANKRD20A4	-213769,-94432
chr9:42468328-42469245	chr9	-	43032789	43033568	False	NR_026759,NR_026558	chr9,chr9	-,+	FAM95B1,AQP7P3	-206,-174691
chr19:46003196-46003483	chr19	+	46003254	46003338	True	NM_003370,NM_005619,NM_206900,NM_001080401,NM_206901	chr19,chr19,chr19,chr19,chr19	+,-,-,+,-	VASP,RTN2,RTN2,PPM1N,RTN2	7349,-2943,-2941,-1574,-6780
chr22:36219161-36219916	chr22	+	36219354	36219927	True	NM_030642,NM_001031695	chr22,chr22	+,-	APOL5,RBFOX2	-105486,16753
chr22:40250224-40251998	chr22	+	40250408	40251943	True	NM_004810,NM_152512	chr22,chr22	+,-	GRAP2,ENTHD1	45142,37908
chr5:52710431-52711597	chr5	+	52710604	52711355	True	NM_006350,NM_176806	chr5,chr5	+,-	FST,MOCS2	65239,-305006
chr4:71555166-71556624	chr4	+	71555177	71556472	True	NM_144646,NM_020368	chr4,chr4	-,+	IGJ,UTP3	-22829,-1040
chr22:30938580-30938782	chr22	+	30938654	30938820	True	NM_001193336,NM_000355	chr22,chr22	-,+	LOC730005,TCN2	3899,64249
chr13:43606883-43608018	chr13	+	43607307	43607888	True	NM_013238,NM_033255	chr13,chr13	+,-	DNAJC15,EPSTI1	-10010,-40930
chr1:4038533-4039046	chr1	+	4038561	4038817	True	NR_024455,NM_207356	chr1,chr1	+,-	LOC100133612,C1orf174	-221644,-221704
chr14:64853354-64853721	chr14	+	64853441	64853508	True	NM_005956,NR_033777	chr14,chr14	+,-	MTHFD1,TEX21P	1250,-39112
chr3:49755515-49755982	chr3	+	49755528	49756012	True	NM_013334,NM_198722,NM_021971,NM_022064	chr3,chr3,chr3,chr3	-,-,-,+	GMPPB,AMIGO3,GMPPB,RNF123	5422,1276,5422,-28589
chr2:97357011-97357261	chr2	+	97357190	97357256	True	NM_001142292,NM_001113382	chr2,chr2	-,+	LMAN2L,FER1L5	48607,-48667
chr19:7582330-7583563	chr19	+	7582549	7583193	True	NM_018083,NM_080662,NM_020533	chr19,chr19,chr19	+,-,+	ZNF358,PEX11G,MCOLN1	-1596,-28644,4302
chr1:55681518-55682589	chr1	+	55681693	55682627	True	NM_015306,NM_174936	chr1,chr1	-,+	USP24,PCSK9	-654,-176597
chr2:33176617-33177816	chr2	+	33176908	33177858	True	NM_206943,NM_015475	chr2,chr2	+,-	LTBP1,FAM98A	-4598,646554
chr20:61001978-61002472	chr20	+	61002234	61002362	True	NM_001024,NM_080833	chr20,chr20	+,-	RPS21,C20orf151	-40164,317
chr2:234261500-234261859	chr2	+	234261606	234261812	True	NM_018218,NM_152879	chr2,chr2	-,+	USP40,DGKD	212482,1340
chr22:43539500-43540023	chr22	+	43539537	43539684	True	NM_173467,NM_014507,NM_007311,NM_000714	chr22,chr22,chr22,chr22	-,-,+,+	MCAT,MCAT,TSPO,TSPO	-134,-134,7850,7850
chr1:6616022-6616755	chr1	+	6616258	6616440	True	NM_177540,NM_024654,NM_138697	chr1,chr1,chr1	+,-,+	TAS1R1,NOL9,TAS1R1	-971,-1600,-971
chrX:41193758-41193975	chrX	+	41193881	41194019	True	NM_001193417,NM_001193416,NM_001356,NR_027761	chrX,chrX,chrX,chrX	+,+,+,-	DDX3X,DDX3X,DDX3X,LOC100132831	-1281,-1281,-1281,-501432
chr15:75181200-75181871	chr15	+	75181317	75181738	True	NM_005697,NM_002435	chr15,chr15	-,+	SCAMP2,MPI	-15647,671
chr17:4402621-4402921	chr17	+	4402667	4402905	True	NM_001124758,NM_001105538	chr17,chr17	+,-	SPNS2,MYBBP1A	-589,55826
chr1:46050657-46052066	chr1	+	46050704	46051733	True	NM_002482,NM_001195193,NM_001114938,NM_152298	chr1,chr1,chr1,chr1	+,+,-,+	NASP,NASP,CCDC17,NASP	-1095,-1095,38059,-1095
chr19:9939391-9939950	chr19	+	9939445	9939801	True	NM_001048241,NM_024292,NM_006221,NM_017703	chr19,chr19,chr19,chr19	+,+,+,-	UBL5,UBL5,PIN1,FBXL12	-928,-928,6197,-9714
chr20:2449319-2450261	chr20	+	2449581	2450011	True	NR_003684,NM_003091,NM_080751,NM_198216	chr20,chr20,chr20,chr20	-,-,+,-	SNORD119,SNRPB,TMC2,SNRPB	-5888,1540,67241,1540
chr4:71528530-71529368	chr4	+	71528743	71529276	True	NM_144646,NM_020368	chr4,chr4	-,+	IGJ,UTP3	3129,24919
chr16:23519376-23520465	chr16	+	23519682	23520478	True	NM_019116,NM_015044	chr16,chr16	+,-	UBFD1,GGA2	48383,1387
chr1:44441178-44441987	chr1	+	44441297	44441800	True	NM_001384,NM_001005417,NM_001039457,NM_003780,NM_004047,NM_001039589,NM_006934	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,+,-	DPH2,B4GALT2,ATP6V0B,B4GALT2,ATP6V0B,DPH2,SLC6A9	-5695,4382,-746,3065,-746,-5695,41247
chr2:58477153-58477829	chr2	+	58477315	58477841	True	NM_001114636,NM_001130481,NM_018062	chr2,chr2,chr2	-,+,-	FANCL,VRK2,FANCL	-8800,-203529,-8800
chr5:52859581-52860657	chr5	+	52859619	52860367	True	NR_030307,NM_002495	chr5,chr5	-,+	MIR581,NDUFS4	387120,-3205
chr2:98349535-98350155	chr2	+	98349588	98350048	True	NM_005735,NM_207519	chr2,chr2	-,+	ACTR1B,ZAP70	-69027,820
chr6:27219274-27219530	chr6	+	27219444	27219572	True	NM_005865,NM_033482	chr6,chr6	+,-	PRSS16,POM121L2	-3993,60489
chr4:113216679-113218435	chr4	+	113217729	113218463	True	NM_001102406,NM_052864,NM_025144	chr4,chr4,chr4	+,-,+	ALPK1,TIFA,ALPK1	35,-10670,35
chr16:71666317-71667733	chr16	+	71666322	71667779	True	NM_000353,NM_001017967,NM_052858	chr16,chr16,chr16	-,+,+	TAT,MARVELD3,MARVELD3	-55324,-6311,-6311
chr3:126315360-126317146	chr3	+	126315689	126316807	True	NR_034158,NM_001039783	chr3,chr3	+,-	C3orf46,TXNRD3IT1	64116,10645
chrX:27826248-27826553	chrX	+	27826283	27826479	True	NM_182506,NM_001017930	chrX,chrX	+,-	MAGEB10,DCAF8L1	-227,173144
chr22:42606261-42606941	chr22	+	42606348	42606870	True	NM_005650,NM_181492,NR_036498	chr22,chr22,chr22	-,-,+	TCF20,TCF20,LOC388906	4625,4625,58888
chr17:63770127-63771779	chr17	+	63770215	63771542	True	NM_002737,NM_001037325	chr17,chr17	+,-	PRKCA,CCDC46	527383,51169
chr20:41814869-41816580	chr20	+	41814891	41816264	True	NM_133170,NM_007050,NM_006275	chr20,chr20,chr20	-,-,+	PTPRT,PTPRT,SRSF6	2344,2344,270239
chr3:189528110-189528366	chr3	+	189528126	189528335	True	NR_030642,NM_018192	chr3,chr3	+,-	MIR944,LEPREL1	19375,310630
chr19:44718805-44719365	chr19	+	44718837	44719320	True	NM_004234,NM_182490	chr19,chr19	-,+	ZNF235,ZNF227	89908,-2204
chr4:139934564-139934876	chr4	+	139934675	139934869	True	NM_006874,NM_012118	chr4,chr4	-,+	ELF2,CCRN4L	70828,2073
chr20:42545208-42545588	chr20	+	42545239	42545595	True	NM_176791,NM_032883,NM_001098796,NM_001098797	chr20,chr20,chr20,chr20	-,+,+,+	GTSF1L,TOX2,TOX2,TOX2	-189597,-509,-509,-1799
chr3:125566489-125566870	chr3	+	125566862	125566912	True	NR_024250,NR_031687	chr3,chr3	+,-	LOC100125556,MIR548I1	68531,-57467
chr3:125566489-125566870	chr16	-	5198760	5198810	False	NM_019109,NM_201598	chr16,chr16	+,-	ALG1,FAM86A	-77001,-50971
chr19:43917721-43918853	chr19	+	43917778	43918735	True	NM_001130011,NM_014400	chr19,chr19	+,-	TEX101,LYPD3	299,51146
chr3:196014998-196015447	chr3	+	196015203	196015330	True	NM_005017,NM_152672	chr3,chr3	-,+	PCYT1A,OSTalpha	-619,-71871
chr15:39871749-39872506	chr15	+	39871839	39872500	True	NM_152597,NM_003246	chr15,chr15	-,+	FSIP1,THBS1	202595,779
chr3:112011683-112012942	chr3	+	112011711	112012900	True	NM_183061,NM_001004196	chr3,chr3	-,+	SLC9A10,CD200	224,39015
chr19:59056565-59057053	chr19	+	59056601	59057103	True	NM_198426,NM_014453,NM_005762	chr19,chr19,chr19	-,-,+	CHMP2A,CHMP2A,TRIM28	9308,9439,-816
chr6:154423558-154424566	chr6	+	154423669	154424602	True	NM_001130699,NM_001145287	chr6,chr6	-,+	IPCEF1,OPRM1	226664,-16078
chr5:180464312-180465697	chr5	+	180465092	180465678	True	NM_152547,NM_203297	chr5,chr5	+,-	BTNL9,TRIM7	1546,162302
chr22:21873446-21874126	chr22	+	21873598	21874085	True	NR_003700,NM_003347	chr22,chr22	-,+	PI4KAP2,UBE2L3	-1818,47871
chr22:21873446-21874126	chr22	-	21769380	21769867	False	NM_015094,NR_003700	chr22,chr22	+,-	HIC2,PI4KAP2	1825,101974
chr22:21873446-21874126	chr22	+	20429619	20430106	False	NR_003563,NR_026919	chr22,chr22	-,+	PI4KAP1,LOC150197	-30924,-235826
chr14:62497023-62498500	chr14	+	62497096	62498452	True	NM_031914,NM_001017970	chr14,chr14	+,-	SYT16,TMEM30B	-34611,-748566
chr12:57849546-57850270	chr12	+	57849735	57850211	True	NM_001167609,NM_001080156,NM_031479,NM_005269,NM_001160045	chr12,chr12,chr12,chr12,chr12	+,-,+,+,+	GLI1,ARHGAP9,INHBE,GLI1,GLI1	3722,21567,-690,3722,3706
chr5:161531029-161532729	chr5	+	161531031	161532439	True	NM_198904,NM_021911	chr5,chr5	+,-	GABRG2,GABRB2	-36441,-555901
chr1:93295062-93296360	chr1	+	93295335	93295862	True	NR_000006,NM_000969,NM_005665	chr1,chr1,chr1	+,+,-	SNORD21,RPL5,EVI5	6983,1731,-37374
chr11:61583569-61583887	chr11	+	61583577	61583933	True	NM_013402,NM_004265,NR_031729	chr11,chr11,chr11	-,+,-	FADS1,FADS2,MIR1908	646,11779,-865
chr22:29171171-29171634	chr22	+	29171258	29171564	True	NM_173510,NM_001079539	chr22,chr22	+,-	CCDC117,XBP1	-2652,25054
chr16:82203805-82204059	chr16	+	82203810	82203964	True	NM_005792,NM_002153	chr16,chr16	-,+	MPHOSPH6,HSD17B2	5,-135003
chr1:178512562-178514058	chr1	+	178512690	178514052	True	NR_033186,NM_004673	chr1,chr1	+,-	C1orf220,ANGPTL1	-810,326213
chr18:43408634-43408860	chr18	+	43408728	43408826	True	NM_213602,NM_020964	chr18,chr18	+,-	SIGLEC15,EPG5	-3234,138529
chr19:858505-858758	chr19	+	858614	858782	True	NM_001972,NM_001928,NM_005481	chr19,chr19,chr19	+,+,-	ELANE,CFD,MED16	-6378,882,34486
chr11:3526954-3527545	chr11	+	3526966	3527559	True	NM_007152,NR_002720	chr11,chr11	-,+	ZNF195,TRPC2	-126518,120154
chr2:24349789-24350573	chr2	+	24349989	24350519	True	NM_199346,NM_001145710	chr2,chr2	-,+	PFN4,LOC375190	-3838,-3690
chr20:5110914-5111283	chr20	+	5110952	5111149	True	NM_003818,NM_002592	chr20,chr20	+,-	CDS2,PCNA	-3527,-3684
chr11:124626566-124627422	chr11	+	124626662	124627451	True	NM_138961,NM_006176,NM_014312	chr11,chr11,chr11	-,+,-	ESAM,NRGN,VSIG2	4823,-16884,-4553
chrX:22289168-22290940	chrX	+	22289332	22290983	True	NM_152577,NM_014332	chrX,chrX	+,-	ZNF645,SMPX	76,-513102
chr1:160676672-160678634	chr1	+	160676887	160678671	True	NM_001778,NM_021181	chr1,chr1	-,+	CD48,SLAMF7	2964,30405
chr1:14924187-14924533	chr1	+	14924204	14924572	True	NM_201628,NM_015209,NR_027136	chr1,chr1,chr1	+,+,-	KAZN,KAZN,C1orf126	640,640,554438
chr2:108915939-108916554	chr2	+	108916037	108916557	True	NM_176825,NR_024439	chr2,chr2	+,-	SULT1C2,LOC729121	-10999,-473454
chr13:102099587-102100534	chr13	+	102099587	102100529	True	NM_052867,NM_004791	chr13,chr13	-,+	NALCN,ITGBL1	-30774,4436
chr7:1569022-1569226	chr7	+	1569056	1569138	True	NM_002360,NM_001080453	chr7,chr7	+,-	MAFK,INTS1	1229,-25038
chr19:18314001-18314551	chr19	+	18314060	18314382	True	NM_002866,NM_032683	chr19,chr19	-,+	RAB3A,MPV17L2	542,-10071
chr4:47975386-47975929	chr4	+	47975385	47975793	True	NM_001142564,NM_207330	chr4,chr4	-,+	CNGA1,NIPAL1	7819,42997
chr10:16478505-16478817	chr10	+	16478516	16478790	True	NM_001001484,NM_001010908,NM_030664	chr10,chr10,chr10	+,-,+	PTER,C1QL3,PTER	176,85264,176
chr2:34127532-34128252	chr2	+	34127580	34128153	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-388702,-174296
chr2:85842575-85842911	chr2	+	85842575	85842747	True	NM_006590,NM_001013649	chr2,chr2	+,-	USP39,C2orf68	535,-3396
chr10:111987389-111988028	chr10	+	111987470	111987983	True	NM_005962,NM_005871	chr10,chr10	+,-	MXI1,SMNDC1	-1759,76774
chr4:186987732-186987943	chr4	+	186987857	186987983	True	NM_021069,NM_003265	chr4,chr4	-,+	SORBS2,TLR3	-109987,2325
chr5:10653135-10654871	chr5	+	10653171	10654797	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-88787,106640
chr13:41051733-41053136	chr13	+	41051867	41053157	True	NR_024505,NR_024507,NR_024506,NM_014252	chr13,chr13,chr13,chr13	-,-,-,+	LOC646982,LOC646982,LOC646982,SLC25A15	2036,2036,2036,310389
chr13:37491122-37491380	chr13	+	37491140	37491328	True	NM_001127217,NM_005905,NM_181503	chr13,chr13,chr13	-,-,+	SMAD9,SMAD9,EXOSC8	3143,3143,83349
chr6:131388802-131389317	chr6	+	131388808	131389358	True	NM_001431,NM_016377,NM_001199388,NM_001135554,NM_001135555	chr6,chr6,chr6,chr6,chr6	-,+,-,-,-	EPB41L2,AKAP7,EPB41L2,EPB41L2,EPB41L2	-4346,77102,-4392,-4346,-4392
chr22:35779463-35779906	chr22	+	35779482	35779936	True	NM_005368,NM_002133	chr22,chr22	-,+	MB,HMOX1	233498,-2474
chr19:3187414-3187729	chr19	+	3187413	3187549	True	NM_003775,NM_198969,NM_020170	chr19,chr19,chr19	+,-,+	S1PR4,AES,NCLN	-8728,-124449,-1589
chr17:20228121-20229909	chr17	+	20228254	20229557	True	NM_001042685,NR_023380	chr17,chr17	-,+	LGALS9B,CCDC144C	141352,-3831
chr17:20228121-20229909	chr17	-	20795951	20796014	False	NM_001004306,NM_015510	chr17,chr17	-,+	CCDC144NL,DHRS7B	3502,234243
chr17:20228121-20229909	chr17	+	16597055	16597118	False	NM_020787,NM_014695	chr17,chr17	-,+	ZNF624,CCDC144A	-39888,-3480
chr17:20228121-20229909	chr17	-	18525059	18525122	False	NR_036647,NM_001037330	chr17,chr17	-,+	CCDC144B,TRIM16L	3871,100279
chr17:20228121-20229909	chr17	+	18727510	18727573	False	NM_001145045,NM_002767	chr17,chr17	-,+	ZNF286B,PRPSAP2	-141938,33918
chr8:95214556-95215252	chr8	+	95214747	95215247	True	NM_004063,NM_001161778	chr8,chr8	-,+	CDH17,PDP1	5618,-284806
chr16:129680-129942	chr16	+	129686	129897	True	NM_001015052,NM_022450,NM_002434,NM_001015054	chr16,chr16,chr16,chr16	+,-,+,+	MPG,RHBDF1,MPG,MPG	-1568,-7057,-1568,-2719
chr12:130644699-130644998	chr12	+	130644699	130645018	True	NR_033834,NM_007197	chr12,chr12	-,+	FLJ31485,FZD10	1257,1985
chr19:18383511-18384135	chr19	+	18383710	18383835	True	NM_025249,NR_036155,NM_005354,NM_001145304,NM_001145305	chr19,chr19,chr19,chr19,chr19	-,+,-,-,-	KIAA1683,MIR3188,JUND,KIAA1683,KIAA1683	1549,9051,8662,1549,1549
chr11:125439688-125440100	chr11	+	125439691	125440116	True	NM_001007277,NM_022549,NM_004879	chr11,chr11,chr11	+,-,+	EI24,FEZ1,EI24	-444,-73485,-444
chr16:47484654-47486129	chr16	+	47484790	47486173	True	NM_030790,NM_000293,NM_001031835	chr16,chr16,chr16	-,+,+	ITFG1,PHKB,PHKB	8892,9036,9036
chr17:44590119-44590652	chr17	+	44590189	44590273	True	NM_001006607,NM_016632	chr17,chr17	+,-	LRRC37A2,ARL17A	-164,66865
chr17:44590119-44590652	chr17	-	43627538	43627590	False	NR_002940,NR_037772	chr17,chr17	-,+	LRRC37A4,CRHR1	-29649,70119
chr17:44590119-44590652	chr17	+	44372610	44372662	False	NM_001103154,NM_014834	chr17,chr17	-,+	ARL17B,LRRC37A	66522,-164
chr7:73706061-73706410	chr7	+	73706084	73706258	True	NM_181471,NM_003388,NM_032421	chr7,chr7,chr7	-,+,+	RFC2,CLIP2,CLIP2	-37346,-2330,-2330
chr10:52498672-52499333	chr10	+	52499256	52499344	True	NM_147156,NM_001079516	chr10,chr10	-,+	SGMS1,ASAH2B	-115519,363
chr20:34245906-34246399	chr20	+	34246033	34246135	True	NM_080748,NM_152838,NM_001198863,NM_006047,NM_003915,NM_001198838,NR_037188,NM_152928,NM_152925,NM_152926,NM_152927,NM_001198840	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,-,-,-,-,-,-,-,-,-,-,-	ROMO1,RBM12,CPNE1,RBM12,CPNE1,RBM12,CPNE1,CPNE1,CPNE1,CPNE1,CPNE1,RBM12	41096,6797,6797,6797,-4202,6797,6778,6797,6797,6797,6797,6797
chr3:179754632-179754872	chr3	+	179754675	179754747	True	NM_003940,NM_016559	chr3,chr3	+,-	USP13,PEX5L	-383793,-158
chr6:155617705-155618844	chr6	+	155617723	155618885	True	NM_001001346,NM_016020	chr6,chr6	+,-	CLDN20,TFB1M	-32635,16789
chr1:29565121-29565767	chr1	+	29565363	29565722	True	NM_016011,NM_133177,NM_133178,NM_001195001,NM_001024732,NM_005704	chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,+,-,+	MECR,PTPRU,PTPRU,PTPRU,MECR,PTPRU	-7909,-2386,-2386,-2386,-7909,-2386
chr1:1567037-1567267	chr1	+	1567062	1567280	True	NM_006983,NM_014188,NR_002946	chr1,chr1,chr1	+,-,+	MMP23B,SSU72,MMP23A	279,-56800,878
chr11:3185762-3186099	chr11	+	3185765	3185973	True	NM_001144063,NM_020896,NM_145638,NR_027138	chr11,chr11,chr11,chr11	-,-,-,+	OSBPL5,OSBPL5,OSBPL5,C11orf36	659,659,659,53588
chr11:59523623-59524658	chr11	+	59523655	59524286	True	NM_004177,NM_001005324,NM_001178040	chr11,chr11,chr11	+,-,+	STX3,OR10V1,STX3	-1175,-42337,-1175
chr2:178935865-178936687	chr2	+	178936008	178936658	True	NM_016953,NM_152945	chr2,chr2	-,+	PDE11A,RBM45	874,40523
chr12:48165434-48166033	chr12	+	48165797	48166051	True	NM_001098531,NM_017842	chr12,chr12	-,+	RAPGEF3,SLC48A1	-12908,915
chr19:48494810-48495355	chr19	+	48495191	48495391	True	NM_022142,NM_001128326	chr19,chr19	+,-	ELSPBP1,BSPH1	2516,86
chr20:48099024-48099276	chr20	+	48099153	48099223	True	NM_004975,NR_003030	chr20,chr20	-,+	KCNB1,SNORD12	8,-201984
chr21:45194469-45195211	chr21	+	45194565	45194800	True	NM_000100,NM_003683	chr21,chr21	-,+	CSTB,RRP1	1518,14617
chr1:45141486-45143266	chr1	+	45141636	45143294	True	NM_001145636,NM_024587	chr1,chr1	+,-	C1orf228,TMEM53	-1293,-1537
chr6:39199553-39200547	chr6	+	39199575	39200349	True	NM_003740,NM_002062	chr6,chr6	-,+	KCNK5,GLP1R	-2324,-183070
chr12:2942366-2942693	chr12	+	2942426	2942688	True	NM_018463,NM_031474	chr12,chr12	+,-	ITFG2,NRIP2	-20690,1583
chr1:8878191-8879251	chr1	+	8878243	8878854	True	NM_001215,NM_001042681,NM_012102	chr1,chr1,chr1	+,-,-	CA6,RERE,RERE	127067,-544,-544
chr1:151317805-151318797	chr1	+	151318110	151318844	True	NM_000449,NM_002796,NM_001025603	chr1,chr1,chr1	-,+,-	RFX5,PSMB4,RFX5	975,53196,975
chr19:892730-892969	chr19	+	892756	892980	True	NM_005481,NM_032551	chr19,chr19	-,+	MED16,KISS1R	288,24361
chr3:45068813-45070461	chr3	+	45068821	45070259	True	NM_003278,NM_016598	chr3,chr3	+,-	CLEC3B,ZDHHC3	-1113,-51147
chr10:126486891-126488840	chr10	+	126487062	126488426	True	NM_032182,NM_212554	chr10,chr10	+,-	FAM175B,METTL10	1927,-6623
chr11:61688317-61688744	chr11	+	61688671	61688737	True	NM_013401,NM_001139443	chr11,chr11	-,+	RAB3IL1,BEST1	-3674,28618
chr19:6881863-6882999	chr19	+	6882152	6882842	True	NR_024075,NM_001974	chr19,chr19	-,+	EMR4P,EMR1	108065,4739
chr8:7318151-7318876	chr8	+	7318155	7318831	True	NM_001040703,NM_016512,NM_058206,NM_058207,NM_058200,NM_058201,NM_058202,NM_058203	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	+,-,-,-,-,-,-,-	DEFB105B,SPAG11B,SPAG11B,SPAG11B,SPAG11B,SPAG11B,SPAG11B,SPAG11B	26411,2411,-8268,-8268,2411,2411,2411,2411
chr8:7318151-7318876	chr8	-	7707762	7708438	False	NM_152250,NM_001081552,NM_058203	chr8,chr8,chr8	-,+,+	DEFB105A,SPAG11A,SPAG11B	-26402,-2411,-2411
chr20:2795835-2796242	chr20	+	2795835	2796221	True	NM_001167670,NM_080739,NM_019609	chr20,chr20,chr20	+,+,-	LOC100288797,C20orf141,CPXM1	754,-229,-14543
chr19:45826411-45826628	chr19	+	45826411	45826667	True	NM_001824,NM_177417	chr19,chr19	-,+	CKM,KLC3	-178,17330
chr11:3649671-3650811	chr11	+	3649830	3650468	True	NM_053017,NR_002720	chr11,chr11	-,+	ART5,TRPC2	13073,-2167
chr12:117626654-117627281	chr12	+	117626740	117627138	True	NM_153348,NM_033624,NM_015002	chr12,chr12,chr12	+,-,-	FBXW8,FBXO21,FBXO21	-278030,1212,1212
chrX:38218168-38218967	chrX	+	38218199	38218615	True	NM_001034853,NM_000531	chrX,chrX	-,+	RPGR,OTC	-31411,-6521
chr22:36222108-36223280	chr22	+	36222695	36223278	True	NM_030642,NM_001031695	chr22,chr22	+,-	APOL5,RBFOX2	-108834,13403
chr1:169453015-169453548	chr1	+	169453036	169453590	True	NM_003666,NM_006996	chr1,chr1	+,-	BLZF1,SLC19A2	-115893,1668
chrY:1664950-1665162	chrY	+	1664999	1665207	True	NM_004043,NR_027383,NM_005088,NM_178129	chrY,chrY,chrY,chrY	+,+,+,-	ASMT,AKAP17A,AKAP17A,P2RY8	-702,-4564,-4564,-58962
chrY:1664950-1665162	chrX	+	1714999	1715207	False	NM_004043,NR_027383,NM_005088,NM_178129	chrX,chrX,chrX,chrX	+,+,+,-	ASMT,AKAP17A,AKAP17A,P2RY8	-702,-4564,-4564,-58962
chr11:65323718-65324603	chr11	+	65324014	65324604	True	NM_001130144,NM_021070,NM_001164266,NM_006396	chr11,chr11,chr11,chr11	-,-,-,+	LTBP3,LTBP3,LTBP3,SSSCA1	1145,1145,1145,13338
chr4:99850329-99850662	chr4	+	99850343	99850630	True	NM_001130678,NM_001130679,NM_015143,NM_001968	chr4,chr4,chr4,chr4	-,-,+,-	EIF4E,EIF4E,METAP1,EIF4E	-100,1206,66157,1206
chr13:59102613-59103970	chr13	+	59102646	59103854	True	NM_001040429,NM_030932	chr13,chr13	+,-	PCDH17,DIAPH3	-896908,1483547
chr6:50678482-50679574	chr6	+	50678579	50679450	True	NM_172238,NM_001037498	chr6,chr6	+,-	TFAP2D,DEFB112	1806,-662215
chr12:56475062-56475514	chr12	+	56475124	56475414	True	NM_001982,NM_001130420,NM_001005915	chr12,chr12,chr12	+,-,+	ERBB3,SMARCC2,ERBB3	-1366,107987,-1283
chr19:17446102-17446763	chr19	+	17446106	17446655	True	NM_133644,NM_001195422,NM_001128855,NM_020959,NM_032620	chr19,chr19,chr19,chr19,chr19	+,+,+,-,+	GTPBP3,GTPBP3,GTPBP3,ANO8,GTPBP3	1670,-366,1670,-468,1670
chr18:66382572-66383161	chr18	+	66382596	66383196	True	NM_019022,NM_001093729	chr18,chr18	-,+	TMX3,CCDC102B	-243,-156
chrX:6145459-6145701	chrX	+	6145479	6145647	True	NM_020742,NM_000351,NM_181332	chrX,chrX,chrX	-,+,-	NLGN4X,STS,NLGN4X	291,991824,1109
chr12:6542342-6543022	chr12	+	6542390	6542737	True	NM_001242,NR_015382	chr12,chr12	+,-	CD27,LOC678655	11313,18009
chr17:6678927-6679224	chr17	+	6678938	6679008	True	NM_053285,NM_153230	chr17,chr17	-,+	TEKT1,FBXO39	56102,543
chrX:100354866-100355705	chrX	+	100355053	100355753	True	NM_006733,NM_024917	chrX,chrX	+,-	CENPI,TRMT2B	-313,-47948
chr19:55585010-55585283	chr19	+	55585150	55585256	True	NM_133180,NM_138412,NM_017729	chr19,chr19,chr19	+,-,+	EPS8L1,RDH13,EPS8L1	1964,-4236,6503
chr20:60814217-60814479	chr20	+	60814280	60814456	True	NM_007232,NM_014835,NM_144498	chr20,chr20,chr20	-,+,+	HRH3,OSBPL2,OSBPL2	-18957,-756,-756
chr9:138855663-138856660	chr9	+	138855727	138856495	True	NM_016172,NM_020822	chr9,chr9	-,+	UBAC1,KCNT1	-2501,-261747
chr3:136471902-136472650	chr3	+	136471944	136472676	True	NM_001097599,NM_005862	chr3,chr3	+,-	TMEM22,STAG1	65184,-699
chr17:16389669-16389981	chr17	+	16389753	16389923	True	NR_003054,NM_207387,NM_001113567	chr17,chr17,chr17	+,-,-	SNORD65,C17orf76,C17orf76	-45264,5607,5607
chr4:79499357-79501012	chr4	+	79499661	79500671	True	NM_005139,NM_001040202	chr4,chr4	+,-	ANXA3,PAQR3	-26970,359961
chr21:44495215-44495578	chr21	+	44495248	44495578	True	NM_000394,NM_000071,NM_001178009,NM_001178008	chr21,chr21,chr21,chr21	+,-,-,-	CRYAA,CBS,CBS,CBS	93562,512,944,944
chr19:44576991-44577859	chr19	+	44577161	44577644	True	NM_001037813,NR_033341	chr19,chr19	+,-	ZNF284,LOC100379224	-923,39753
chr19:49372680-49373016	chr19	+	49372682	49372788	True	NM_014330,NM_020904,NM_001161354	chr19,chr19,chr19	+,-,-	PPP1R15A,PLEKHA4,PLEKHA4	2860,-798,-798
chr11:20181329-20181607	chr11	+	20181346	20181568	True	NM_001111019,NM_001029865	chr11,chr11	+,-	NAV2,DBX1	-136761,352
chr1:169385174-169386894	chr1	+	169385286	169386910	True	NM_003666,NM_021179	chr1,chr1	+,-	BLZF1,C1orf114	-48144,9811
chr11:125706357-125708091	chr11	+	125706519	125708066	True	NM_001144874,NM_212555	chr11,chr11	+,-	PATE4,PATE2	-3366,-57805
chr17:38186187-38186639	chr17	+	38186187	38186301	True	NR_003692,NM_001079518	chr17,chr17	+,-	SNORD124,MED24	-2443,24648
chr6:26456228-26458119	chr6	+	26456420	26458097	True	NM_001197233,NM_001197234,NM_078476,NM_003543,NM_007049	chr6,chr6,chr6,chr6,chr6	+,+,+,-,+	BTN2A1,BTN2A1,BTN2A1,HIST1H4H,BTN2A1	80,55,55,-170693,55
chrX:136115375-136115913	chrX	+	136115448	136115802	True	NM_054021,NM_000074	chrX,chrX	-,+	GPR101,CD40LG	-1615,-385163
chrX:12992143-12992488	chrX	+	12992167	12992532	True	NM_183049,NM_021109,NR_030727	chrX,chrX,chrX	+,+,-	TMSL3,TMSB4X,LOC349408	692,693,-30748
chr8:145130422-145132281	chr8	+	145130592	145132229	True	NM_003801,NM_017570,NM_019037	chr8,chr8,chr8	+,-,+	GPAA1,OPLAH,EXOSC4	5294,-15008,1292
chr1:206224018-206224523	chr1	+	206224041	206224415	True	NM_000707,NM_001007544	chr1,chr1	+,-	AVPR1B,C1orf186	21,64282
chr10:5543668-5544187	chr10	+	5543721	5544129	True	NM_017422,NM_005185	chr10,chr10	-,+	CALML5,CALML3	-2188,22794
chr3:13114439-13114646	chr3	+	13114468	13114542	True	NM_012298,NM_001134382	chr3,chr3	+,-	CAND2,IQSEC1	-276348,125
chrX:48433964-48434340	chrX	+	48433989	48434389	True	NM_006743,NM_033518	chrX,chrX	+,-	RBM3,SLC38A5	-1204,-105345
chr5:173148839-173150487	chr5	+	173148860	173150242	True	NR_027109,NM_138369	chr5,chr5	+,-	LOC285593,BOD1	-142254,-105194
chr5:155753879-155754217	chr5	+	155753923	155754257	True	NM_001128209,NM_001146726,NM_000337,NM_172244	chr5,chr5,chr5,chr5	+,-,+,+	SGCD,TIMD4,SGCD,SGCD	-207,636059,-207,-207
chr1:62193011-62193946	chr1	+	62193477	62193818	True	NM_176877,NM_032027	chr1,chr1	+,-	INADL,TM2D1	14330,-2382
chr14:76834609-76835910	chr14	+	76834618	76835241	True	NM_004452,NM_003239	chr14,chr14	+,-	ESRRB,TGFB3	2448,-386526
chr15:86337569-86337798	chr15	+	86337597	86337793	True	NM_022480,NM_144767	chr15,chr15	-,+	KLHL25,AKAP13	446,-117380
chrX:69674124-69674699	chrX	+	69674200	69674672	True	NM_020730,NM_016484,NM_021120,NM_001166278	chrX,chrX,chrX,chrX	+,-,+,+	DLG3,PDZD11,DLG3,DLG3	-2102,-164402,-9552,273
chr15:74975731-74977666	chr15	+	74976897	74977401	True	NM_001142443,NM_000761	chr15,chr15	-,+	EDC3,CYP1A2	11042,63782
chr1:157041573-157043098	chr1	+	157041622	157043027	True	NM_001004341,NM_198236,NR_001560	chr1,chr1,chr1	-,-,+	ETV3L,ARHGEF11,CYCSP52	26623,-26460,55126
chr1:22303702-22304427	chr1	+	22303835	22304052	True	NM_005529,NM_007352	chr1,chr1	-,+	HSPG2,CELA3B	-40085,-468
chr21:16416433-16417464	chr21	+	16416658	16417463	True	NM_003489,NM_013396	chr21,chr21	-,+	NRIP1,USP25	19720,685032
chr13:25946923-25947802	chr13	+	25946938	25947500	True	NM_004685,NM_016529	chr13,chr13	-,+	MTMR6,ATP8A2	-85234,-780
chr16:28633730-28633967	chr16	+	28633740	28633826	True	NM_001199142,NM_177536	chr16,chr16	+,-	EIF3C,SULT1A1	66052,1090
chrY:6112480-6113223	chrY	+	6112654	6113064	True	NM_022573,NR_001540,NR_003593	chrY,chrY,chrY	+,-,-	TSPY2,TTTY23,TTTY23B	1199,-1003,-1003
chrY:6112480-6113223	chrY	-	9746993	9747403	False	NR_001540,NR_003593,NR_003589	chrY,chrY,chrY	+,+,-	TTTY23,TTTY23B,TTTY1B	1003,1003,-135065
chr3:8693683-8695285	chr3	+	8693821	8695329	True	NM_033337,NR_024065,NM_015931	chr3,chr3,chr3	+,+,-	CAV3,LOH3CR2A,C3orf32	80156,-80404,-84
chr11:64571677-64571999	chr11	+	64571804	64572018	True	NM_004579,NM_006244,NM_130799,NM_000244,NM_130804,NM_130803,NM_130802,NM_130801,NM_130800	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,+,-,-,-,-,-,-,-	MAP4K2,PPP2R5B,MEN1,MEN1,MEN1,MEN1,MEN1,MEN1,MEN1	-1091,120124,6220,6220,6798,6798,6245,6067,6067
chr5:158635230-158635942	chr5	+	158635250	158635782	True	NM_001199381,NM_001199380,NM_001199383,NM_001199382,NM_145049,NM_144726	chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,+,-	RNF145,RNF145,RNF145,RNF145,UBLCP1,RNF145	-110,1329,831,-594,54306,-416
chr4:55096405-55096649	chr4	+	55096468	55096570	True	NM_012110,NM_006206	chr4,chr4	-,+	CHIC2,PDGFRA	-165680,-1255
chr1:233082508-233082957	chr1	+	233082659	233082995	True	NM_032324,NM_014801	chr1,chr1	+,-	NTPCR,PCNXL2	3374,348514
chr2:38978513-38978851	chr2	+	38978523	38978890	True	NM_001031684,NM_001195446,NM_024775	chr2,chr2,chr2	-,-,+	SRSF7,SRSF7,GEMIN6	9,9,26436
chrY:22737043-22737503	chrY	+	22737263	22737541	True	NM_004681,NR_001542	chrY,chrY	+,-	EIF1AY,TTTY10	69,-56149
chr5:179228320-179228555	chr5	+	179228322	179228458	True	NR_031598,NM_054013,NM_145867,NM_001142299,NM_001142298,NM_014275	chr5,chr5,chr5,chr5,chr5,chr5	-,-,+,+,+,-	MIR1229,MGAT4B,LTC4S,SQSTM1,SQSTM1,MGAT4B	-2976,1467,-7387,5544,4929,5544
chr6:90346105-90347060	chr6	+	90346145	90347102	True	NM_020466,NR_028495,NR_028494,NR_028493,NM_001137667	chr6,chr6,chr6,chr6,chr6	-,-,-,-,+	LYRM2,LYRM2,LYRM2,LYRM2,CASP8AP2	1433,1175,1175,1175,192516
chr17:28799718-28800349	chr17	+	28799929	28800375	True	NM_001007024,NM_001007025,NM_206832,NM_004871	chr17,chr17,chr17,chr17	+,+,-,+	GOSR1,GOSR1,TMIGD1,GOSR1	4050,4050,-138864,4050
chr1:78715659-78716089	chr1	+	78715720	78716040	True	NR_027310,NM_003902	chr1,chr1	+,-	MGC27382,FUBP1	-20500,-270943
chr1:106621850-106623392	chr1	+	106621850	106623207	True	NM_018137,NM_001079874	chr1,chr1	+,-	PRMT6,VAV3	976059,1607976
chr7:42275710-42276063	chr7	+	42275722	42276040	True	NM_000168,NR_027119	chr7,chr7	-,+	GLI3,LOC285954	628,-542227
chr1:92546229-92547221	chr1	+	92546425	92547113	True	NM_001195684,NM_183242	chr1,chr1	-,+	TGFBR3,BTBD8	-174866,-614
chr6:168198460-168198853	chr6	+	168198732	168198831	True	NR_026773,NM_001040000	chr6,chr6	-,+	C6orf123,MLLT4	-1193,28839
chr1:32168033-32169153	chr1	+	32168207	32169065	True	NM_001856,NM_001525	chr1,chr1	-,+	COL16A1,HCRTR1	753,-84971
chr16:85341917-85342713	chr16	+	85341951	85342753	True	NR_033984,NM_198491	chr16,chr16	+,-	LOC400548,FAM92B	-171246,-195837
chr2:131511326-131512848	chr2	+	131511542	131512571	True	NM_152698,NM_001079530,NM_001105195,NM_001105193,NM_001105194	chr2,chr2,chr2,chr2,chr2	+,-,+,+,+	FAM123C,CFC1B,FAM123C,FAM123C,FAM123C	505,-154291,1292,652,1292
chr17:17109612-17110283	chr17	+	17109730	17110244	True	NM_178836,NM_020201	chr17,chr17	-,+	PLD6,NT5M	-84,96435
chr10:99530915-99531189	chr10	+	99531068	99531234	True	NM_003015,NM_001002261	chr10,chr10	-,+	SFRP5,ZFYVE27	572,-32885
chr4:186456819-186457108	chr4	+	186456850	186457060	True	NM_001114357,NM_001114107,NM_014476	chr4,chr4,chr4	+,-,-	C4orf47,PDLIM3,PDLIM3	-106356,-138,-138
chr3:49760115-49760431	chr3	+	49760151	49760339	True	NM_013334,NM_198722,NM_021971,NM_022064	chr3,chr3,chr3,chr3	-,-,-,+	GMPPB,AMIGO3,GMPPB,RNF123	1095,-2913,1095,-33212
chr12:132380939-132381182	chr12	+	132381023	132381157	True	NM_175066,NM_003565	chr12,chr12	-,+	DDX51,ULK1	247773,-1795
chr16:16427531-16427795	chr16	+	16427533	16427717	True	NR_036447,NM_001079528	chr16,chr16	+,-	PKD1P1,ABCC6	-16118,-110205
chr16:16427531-16427795	chr16	+	15029046	15029230	False	NR_023387,NM_006985	chr16,chr16	-,+	ABCC6P2,NPIP	-110487,2069
chr16:16427531-16427795	chr16	-	18468712	18468896	False	NR_036142,NR_003569	chr16,chr16	-,+	MIR3180-2,ABCC6P1	27278,113673
chr5:64114262-64116011	chr5	+	64114379	64116024	True	NM_173829,NM_005869	chr5,chr5	-,+	SREK1IP1,CWC27	-49883,-49679
chr20:37851919-37853615	chr20	+	37852102	37853375	True	NR_033905,NR_027124	chr20,chr20	+,-	DHX35,LOC339568	-261179,69
chr10:48419393-48420329	chr10	+	48419447	48420218	True	NM_016204,NM_153034	chr10,chr10	-,+	GDF2,ZNF488	-2594,-64409
chr7:56373573-56374142	chr7	+	56373627	56374190	True	NR_029420,NR_026929	chr7,chr7	-,+	LOC650226,DKFZp434L192	141928,189725
chr5:59996182-59997597	chr5	+	59996273	59997147	True	NR_028509,NM_001145208,NM_018369	chr5,chr5,chr5	+,-,-	PART1,DEPDC1B,DEPDC1B	-212565,-280,-280
chr17:6941548-6941932	chr17	+	6941769	6941909	True	NM_153357,NM_201566	chr17,chr17	-,+	SLC16A11,SLC16A13	5383,-2426
chr11:35681971-35683549	chr11	+	35682063	35683576	True	NM_015430,NM_017583	chr11,chr11	-,+	PAMR1,TRIM44	-134887,776
chr22:39917789-39919478	chr22	+	39917873	39919460	True	NM_194326,NM_182810,NM_001675	chr22,chr22,chr22	-,+,+	RPS19BP1,ATF4,ATF4	9450,-1355,-1355
chr18:14971704-14972438	chr18	+	14971764	14972476	True	NR_027417,NR_036153	chr18,chr18	-,+	LOC644669,MIR3156-2	353492,-141650
chr11:113790404-113790841	chr11	+	113790621	113790733	True	NM_020886,NM_006028	chr11,chr11	-,+	USP28,HTR3B	-44365,-15085
chr18:78005543-78005907	chr18	+	78005655	78005855	True	NR_028339	chr18	+	LOC100130522	-99899
chr11:47471451-47472306	chr11	+	47471453	47471847	True	NM_152264,NM_032645,NM_005055	chr11,chr11,chr11	+,-,-	SLC39A13,RAPSN,RAPSN	-41458,-723,-723
chr19:3186887-3187414	chr19	+	3186923	3187453	True	NM_003775,NM_198969,NM_020170	chr19,chr19,chr19	+,-,+	S1PR4,AES,NCLN	-8238,-123959,-1099
chr8:101169627-101170033	chr8	+	101170022	101170082	True	NM_172218,NM_003114,NM_005034,NR_036491	chr8,chr8,chr8,chr8	+,+,+,-	SPAG1,SPAG1,POLR2K,FBXO43	180,480,-7234,-11923
chr17:37730875-37731787	chr17	+	37731010	37731610	True	NM_032192,NM_006160	chr17,chr17	+,-	PPP1R1B,NEUROD2	51568,32615
chr5:78998025-78998946	chr5	+	78998374	78998936	True	NM_004272,NM_153610	chr5,chr5	-,+	HOMER1,CMYA5	-188674,-12766
chr19:1438945-1439352	chr19	+	1439015	1439221	True	NM_138924,NM_001018	chr19,chr19	-,+	GAMT,RPS15	-37463,-703
chr9:102588031-102588773	chr9	+	102588089	102588810	True	NM_173199,NM_015051,NM_173200,NM_006981	chr9,chr9,chr9,chr9	+,-,+,+	NR4A3,ERP44,NR4A3,NR4A3	-4003,272575,198,-4003
chr6:43146854-43147878	chr6	+	43146868	43147246	True	NM_006443,NM_003131,NM_015089	chr6,chr6,chr6	-,+,+	C6orf108,SRF,CUL9	50015,-7999,2675
chr16:89573629-89574020	chr16	+	89573633	89573953	True	NM_199367,NM_003119,NM_013275	chr16,chr16,chr16	+,+,-	SPG7,SPG7,ANKRD11	851,851,-16664
chr9:100281434-100281655	chr9	+	100281448	100281701	True	NM_139246,NM_003275	chr9,chr9	-,+	TSTD2,TMOD1	114312,-17578
chr6:134159397-134160176	chr6	+	134159401	134159687	True	NR_027030,NM_145176	chr6,chr6	+,-	MGC34034,SLC2A12	-17167,214154
chr7:7516764-7518058	chr7	+	7516812	7517387	True	NM_001037763,NM_019005	chr7,chr7	-,+	COL28A1,MIOS	58132,89228
chr12:76952676-76952896	chr12	+	76952693	76952893	True	NM_020841,NM_001003712,NM_015336	chr12,chr12,chr12	-,-,+	OSBPL8,OSBPL8,ZDHHC17	746,746,204960
chr12:55378619-55379226	chr12	+	55378629	55379223	True	NM_001098815,NM_001136030,NM_021191	chr12,chr12,chr12	-,-,+	KIAA0748,KIAA0748,NEUROD4	-3007,-173,34505
chr1:100363791-100365335	chr1	+	100364031	100364530	True	NM_000645,NM_001013660	chr1,chr1	+,-	AGL,FRRS1	-37323,-132682
chr8:25317116-25318564	chr8	+	25317176	25318508	True	NM_017634,NM_152562	chr8,chr8	-,+	KCTD9,CDCA2	-1192,-714
chr7:27157412-27157872	chr7	+	27157576	27157880	True	NM_030661,NM_153631,NR_002795	chr7,chr7,chr7	-,-,+	HOXA3,HOXA3,HOXA11-AS1	1384,8809,67146
chr16:30906244-30907604	chr16	+	30906298	30907516	True	NM_001330,NM_004765,NR_031576,NM_001142544	chr16,chr16,chr16,chr16	+,-,+,+	CTF1,BCL7C,MIR762,CTF1	411,-899,-1128,411
chr20:7921057-7922002	chr20	+	7921177	7921687	True	NM_015192,NM_017545	chr20,chr20	+,-	PLCB1,HAO1	191608,-84
chr21:17477501-17479222	chr21	+	17477973	17479241	True	NM_003489,NR_027790	chr21,chr21	-,+	NRIP1,C21orf34	-1040847,-35195
chr1:204337788-204338459	chr1	+	204337892	204338399	True	NM_001204171,NR_027022,NM_014935	chr1,chr1,chr1	+,-,-	MDM4,LOC127841,PLEKHA6	147107,505,-8848
chr20:45146106-45146475	chr20	+	45146109	45146526	True	NM_018102,NM_030777,NM_199441	chr20,chr20,chr20	-,+,-	ZNF334,SLC2A10,ZNF334	-3915,191752,-3915
chr5:109871889-109873758	chr5	+	109872143	109873741	True	NM_001039763,NM_138773	chr5,chr5	-,+	TMEM232,SLC25A46	188759,201012
chr10:116999315-117000129	chr10	+	116999408	117000038	True	NM_207303,NM_001003408	chr10,chr10	+,-	ATRNL1,ABLIM1	-146335,-554994
chr1:24741973-24742322	chr1	+	24742105	24742371	True	NM_020448,NM_001199013,NM_001199012,NM_001199014,NM_178122	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	NIPAL3,C1orf201,C1orf201,C1orf201,C1orf201	-19,-1843,-518,-1843,-1843
chr5:59803195-59803773	chr5	+	59803403	59803819	True	NR_028509,NM_001165899	chr5,chr5	+,-	PART1,PDE4D	-19703,-19478
chr1:204327914-204328820	chr1	+	204327964	204328840	True	NM_001204171,NM_014935	chr1,chr1	+,-	MDM4,PLEKHA6	156666,254
chr12:132626893-132627257	chr12	+	132626951	132627181	True	NM_175066,NM_024078	chr12,chr12	-,+	DDX51,NOC4L	1749,1811
chr22:20458646-20459161	chr22	+	20458961	20459193	True	NM_015672,NR_026919	chr22,chr22	-,+	RIMBP3,LOC150197	2643,-265157
chr22:20458646-20459161	chr22	-	21740255	21740487	False	NM_001128635,NR_003700,NM_001128633	chr22,chr22,chr22	+,-,+	RIMBP3B,PI4KAP2,RIMBP3C	-2266,131343,-2643
chr22:20458646-20459161	chr22	+	21902925	21903157	False	NM_001128635,NM_003347,NM_001128633	chr22,chr22,chr22	-,+,-	RIMBP3B,UBE2L3,RIMBP3C	2266,18799,2643
chr2:100755125-100756358	chr2	+	100755423	100756350	True	NM_002285,NM_001011717	chr2,chr2	-,+	AFF3,NMS	2750,330593
chr14:23620604-23621917	chr14	+	23620635	23621963	True	NM_017924,NM_182728	chr14,chr14	+,-	C14orf119,SLC7A8	-55898,1697
chr6:43738094-43738390	chr6	+	43738226	43738308	True	NM_018135,NM_001025369,NM_001025368,NM_001025367,NM_001025366,NM_001033756,NM_001025370,NM_003376,NM_001171624,NM_001171625,NM_001171626,NM_001171627,NM_001171622,NM_001171623,NM_001204384,NM_001204385,NM_001171628,NM_001171629,NM_001171630	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+	MRPS18A,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA,VEGFA	-82677,-332,-332,-332,-332,-332,-332,-332,-332,-332,-332,-332,-332,-332,-332,-332,-332,-332,-332
chr2:152146216-152146727	chr2	+	152146371	152146715	True	NM_004688,NM_007115	chr2,chr2	-,+	NMI,TNFAIP6	-39,67390
chr17:41983608-41984160	chr17	+	41983693	41984187	True	NR_026770,NM_005374	chr17,chr17	+,-	C17orf88,MPP2	10388,976
chr2:220116763-220117111	chr2	+	220116769	220117069	True	NM_006000,NR_003063,NR_026909,NM_024506,NM_001008910	chr2,chr2,chr2,chr2,chr2	-,+,+,-,+	TUBA4A,TUBA4B,STK16,GLB1L,STK16	1619,895,-6619,-6638,-6628
chr1:35662790-35664531	chr1	+	35663098	35664422	True	NM_005066,NM_005095	chr1,chr1	-,+	SFPQ,ZMYM4	-4355,70145
chrX:16738168-16738484	chrX	+	16738176	16738477	True	NM_032796,NM_019857,NM_175859,NR_033181,NM_001144002	chrX,chrX,chrX,chrX,chrX	+,-,-,+,-	SYAP1,CTPS2,CTPS2,SYAP1,CTPS2	-520,-7117,-7401,-520,-7836
chrX:132095748-132096147	chrX	+	132095755	132096165	True	NM_001077188,NM_001042452,NM_147175	chrX,chrX,chrX	-,+,-	HS6ST2,MST4,HS6ST2	-332,-938170,-332
chr4:39041748-39042000	chr4	+	39041800	39041860	True	NM_024943,NM_001171654,NM_001007075	chr4,chr4,chr4	-,+,+	TMEM156,KLHL5,KLHL5	-7759,4590,4590
chr5:122972555-122972861	chr5	+	122972579	122972779	True	NM_004384,NM_153223	chr5,chr5	+,-	CSNK1G3,CEP120	-124837,-213293
chrX:150684379-150685819	chrX	+	150684599	150685727	True	NR_029973,NM_173493	chrX,chrX	-,+	MIR452,PASD1	442507,46279
chr19:49573901-49574667	chr19	+	49573930	49574418	True	NM_031886,NM_006179,NM_003089	chr19,chr19,chr19	-,-,+	KCNA7,NTF4,SNRNP70	1830,-6806,14046
chr1:153280561-153281395	chr1	+	153280829	153281433	True	NM_052891,NM_000427,NM_002965	chr1,chr1,chr1	-,+,+	PGLYRP3,LOR,S100A9	1811,-48701,48896
chr17:38475563-38476011	chr17	+	38475597	38475972	True	NM_001145301,NM_001145302,NM_152219	chr17,chr17,chr17	+,+,-	RARA,RARA,GJD3	-1175,-1175,45023
chr2:27356398-27356605	chr2	+	27356407	27356593	True	NM_032604,NM_178553,NM_013388	chr2,chr2,chr2	+,-,-	ABHD1,C2orf53,PREB	-9801,5789,999
chr19:46496144-46496848	chr19	+	46496384	46496890	True	NM_002516,NM_001080402	chr19,chr19	-,+	NOVA2,CCDC61	-19727,1448
chr16:67026534-67027336	chr16	+	67026932	67027182	True	NM_173815,NM_001190202,NM_001190201,NR_024525	chr16,chr16,chr16,chr16	+,+,+,-	CES4A,CES4A,CES4A,FAM96B	-4491,7233,7233,-58612
chr12:54331970-54332179	chr12	+	54331970	54332227	True	NM_017410,NR_003716	chr12,chr12	+,-	HOXC13,HOTAIR	348,30338
chr22:34982809-34984659	chr22	+	34983325	34984315	True	NM_001008494,NM_133642	chr22,chr22	+,-	ISX,LARGE	477814,-666909
chr22:50765099-50765323	chr22	+	50765235	50765315	True	NM_001001794,NM_014678	chr22,chr22	-,+	FAM116B,PPP6R2	224,16444
chr2:70052121-70053078	chr2	+	70052332	70053132	True	NM_178439,NM_152792	chr2,chr2	+,-	GMCL1,ASPRV1	3685,136326
chr12:56368321-56369320	chr12	+	56368374	56369225	True	NM_001798,NM_002868,NM_001200053,NM_006928,NM_001200054,NM_052827	chr12,chr12,chr12,chr12,chr12,chr12	+,+,-,-,-,+	CDK2,RAB5B,PMEL,PMEL,PMEL,CDK2	-7871,-565,-8528,-7878,-8528,-7871
chr12:56863276-56864402	chr12	+	56863354	56864066	True	NM_012064,NM_207344	chr12,chr12	-,+	MIP,SPRYD4	-14919,-1104
chr11:44590322-44590707	chr11	+	44590459	44590695	True	NM_021926,NM_002231,NM_001024844	chr11,chr11,chr11	-,+,+	ALX4,CD82,CD82	-258743,-3369,-3369
chr1:12706246-12706828	chr1	+	12706339	12706747	True	NM_001013630,NM_004753	chr1,chr1	+,-	AADACL4,DHRS3	-1836,-28519
chr18:29339339-29340078	chr18	+	29339339	29340025	True	NM_001034172,NM_000371	chr18,chr18	-,+	MCART2,TTR	868,-167667
chr15:25324297-25325791	chr15	+	25324327	25325803	True	NR_003331,NR_003330,NR_003333,NR_003332,NR_003326,NR_003327,NR_003324,NR_003325,NR_003323,NR_003328,NR_003329,NR_003336,NR_003318,NM_130838,NR_001290,NR_003335,NR_003334	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,+,+,+,+,-,+,+,+	SNORD116-16,SNORD116-15,SNORD116-18,SNORD116-17,SNORD116-11,SNORD116-12,SNORD116-9,SNORD116-10,SNORD116-8,SNORD116-13,SNORD116-14,SNORD116-22,SNORD116-3,UBE3A,SNORD116-19,SNORD116-21,SNORD116-20	2110,629,4727,2930,-3303,-2181,-6125,-5118,-8800,-174,28,9265,-6125,324900,2930,8146,7004
chr13:21100104-21100519	chr13	+	21100183	21100477	True	NM_006531,NM_015974	chr13,chr13	+,-	IFT88,CRYL1	40730,-171
chr13:109886617-109887824	chr13	+	109886627	109887831	True	NM_003749,NM_001198950	chr13,chr13	-,+	IRS2,MYO16	551133,-605121
chr1:212461517-212463371	chr1	+	212461685	212463251	True	NM_006243,NM_001198862	chr1,chr1	+,-	PPP2R5A,TMEM206	-2872,125042
chr10:5529010-5529803	chr10	+	5529107	5529787	True	NM_017422,NM_005185	chr10,chr10	-,+	CALML5,CALML3	11796,37136
chr1:107683851-107684054	chr1	+	107684037	107684103	True	NM_001113226,NM_001113228,NM_001079874,NM_014917	chr1,chr1,chr1,chr1	+,+,-,+	NTNG1,NTNG1,VAV3,NTNG1	-1459,-1459,547073,-1343
chr4:109548317-109548798	chr4	+	109548651	109548749	True	NM_000995,NM_033625,NR_026968	chr4,chr4,chr4	+,+,-	RPL34,RPL34,LOC285456	-6988,-6961,-7038
chr7:93520358-93520768	chr7	+	93520367	93520640	True	NM_021955,NM_006528	chr7,chr7	+,-	GNGT1,TFPI2	15179,-302
chr8:144119382-144119611	chr8	+	144119482	144119660	True	NR_026913,NM_173687	chr8,chr8	-,+	LOC100133669,C8orf31	-19675,1018
chr7:133989997-133991409	chr7	+	133990148	133991440	True	NM_144648,NM_032826	chr7,chr7	+,-	LRGUK,SLC35B4	-178107,10440
chr3:126272525-126273405	chr3	+	126272575	126272807	True	NM_152533,NM_152889	chr3,chr3	-,+	C3orf22,CHST13	5009,-29450
chr9:116342318-116343242	chr9	+	116342371	116342965	True	NM_017443,NM_021106	chr9,chr9	-,+	POLE3,RGS3	-169342,22
chr8:82193665-82194135	chr8	+	82193864	82194182	True	NM_001444,NM_002677	chr8,chr8	+,-	FABP5,PMP2	-1205,165587
chr1:17905808-17906179	chr1	+	17905809	17906104	True	NM_018715,NM_001011722	chr1,chr1	-,+	RCC2,ARHGEF10L	-139589,943
chr16:30567583-30568315	chr16	+	30567639	30568087	True	NM_001172679,NM_002209,NM_033410	chr16,chr16,chr16	-,+,-	ZNF764,ITGAL,ZNF764	1606,-83707,1606
chr2:27308283-27308502	chr2	+	27308368	27308490	True	NM_007046,NM_006488,NM_000221,NM_001134693	chr2,chr2,chr2,chr2	+,+,+,-	EMILIN1,KHK,KHK,OST4	-6984,1120,1120,-13801
chr17:73106080-73106522	chr17	+	73106194	73106570	True	NM_014595,NM_024585	chr17,chr17	-,+	NT5C,ARMC7	21357,-163
chr7:72739443-72740081	chr7	+	72739448	72739866	True	NM_001135211,NM_003602,NM_178125	chr7,chr7,chr7	+,+,-	FKBP6,FKBP6,TRIM50	2288,2433,2269
chr7:64255129-64256454	chr7	+	64255363	64256499	True	NR_027661,NM_006524,NM_001160183,NR_027660,NR_002789	chr7,chr7,chr7,chr7,chr7	+,+,+,+,-	ZNF138,ZNF138,ZNF138,ZNF138,LOC168474	-644,-644,-644,-644,57730
chr17:38940701-38942279	chr17	+	38940913	38942221	True	NM_181537,NM_001195387	chr17,chr17	-,+	KRT27,TMEM99	-2127,33122
chr5:78533241-78534561	chr5	+	78533400	78534412	True	NM_013391,NM_152405	chr5,chr5	-,+	DMGDH,JMY	-167951,-1526
chr9:27573536-27573758	chr9	+	27573558	27573800	True	NM_018325,NM_020124,NM_145005	chr9,chr9,chr9	-,+,-	C9orf72,IFNK,C9orf72	-77,-49297,92
chr13:52420254-52421371	chr13	+	52420289	52421371	True	NR_027047,NR_027048,NM_031290	chr13,chr13,chr13	-,-,+	NCRNA00282,NCRNA00282,CCDC70	-1003,-1003,14745
chr6:159278995-159280602	chr6	+	159279161	159280183	True	NR_028496,NM_001195032	chr6,chr6	-,+	OSTCL,C6orf99	-497,29435
chr17:80022287-80022654	chr17	+	80022290	80022628	True	NM_212492,NM_022156	chr17,chr17	+,-	GPS1,DUS1L	-12585,1102
chr8:79621194-79622119	chr8	+	79621285	79622094	True	NM_016010,NM_000880	chr8,chr8	+,-	FAM164A,IL7	-43059,95714
chr16:30105206-30106170	chr16	+	30105416	30106172	True	NM_002720,NM_004608,NM_001145524,NM_031477	chr16,chr16,chr16,chr16	+,-,-,-	PPP4C,TBX6,YPEL3,YPEL3	-18083,-2211,1415,1399
chr19:54278820-54279471	chr19	+	54278879	54279251	True	NM_033297,NR_029864	chr19,chr19	-,+	NLRP12,MIR371	32758,11677
chr6:3077009-3078066	chr6	+	3077031	3078104	True	NR_033884,NM_003804	chr6,chr6	-,+	LOC401233,RIPK1	-52026,-24
chr4:144812852-144814600	chr4	+	144812892	144813056	True	NM_198682,NR_003675	chr4,chr4	-,+	GYPE,LOC441046	13714,-332331
chr6:66017956-66019631	chr6	+	66018155	66019579	True	NR_026540,NM_198283	chr6,chr6	+,-	MCART3P,EYS	478192,270176
chr6:66017956-66019631	chr1	-	219778264	219779688	False	NM_138794,NM_018713	chr1,chr1	+,-	LYPLAL1,SLC30A10	-431131,322364
chr11:115373040-115373253	chr11	+	115373081	115373291	True	NM_001098517,NM_182495,NM_014333	chr11,chr11,chr11	-,+,-	CADM1,FAM55B,CADM1	2000,-823933,2000
chr19:53899105-53899586	chr19	+	53899108	53899625	True	NM_001040185,NM_033341	chr19,chr19	+,-	ZNF765,BIRC8	-762,-104233
chr8:95556811-95558692	chr8	+	95556921	95558713	True	NM_183009,NM_015496,NM_001034915	chr8,chr8,chr8	-,-,+	KIAA1429,KIAA1429,ESRP1	7084,7084,94650
chrX:100663891-100665750	chrX	+	100664072	100665727	True	NM_001032393,NM_019597,NM_000169,NR_028407	chrX,chrX,chrX,chrX	+,+,-,+	HNRNPH2,HNRNPH2,GLA,ARMCX4	-1002,-1002,-1071,7538
chr5:34228970-34230234	chr6	+	26904378	26904465	False	NR_003504,NR_026775	chr6,chr6	-,+	GUSBL1,NCRNA00240	19935,20306
chr5:34228970-34230234	chr5	+	34229854	34229936	True	NM_016568,NR_037951	chr5,chr5	+,-	RXFP3,C1QTNF3-AMACR	-293426,-105221
chr5:34228970-34230234	chr5	-	21361825	21361912	False	NR_027027,NM_004934	chr5,chr5	+,-	GUSBP1,CDH18	97676,-1373472
chr3:48538277-48540121	chr3	+	48538608	48540097	True	NM_033629,NM_016479	chr3,chr3	+,-	TREX1,SHISA5	-31430,1614
chr12:4217195-4217514	chr12	+	4217423	4217495	True	NM_001759,NM_020367	chr12,chr12	+,-	CCND2,PARP11	165406,-234815
chr19:41933666-41934168	chr19	+	41933671	41934147	True	NM_198540,NM_001130514	chr19,chr19	-,+	B3GNT8,C19orf69	538,14915
chr16:71911677-71912313	chr16	+	71911925	71912363	True	NM_014761,NM_017530,NM_001201554,NM_001201556,NM_001201552,NM_001201553	chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,-,-,-	KIAA0174,ZNF821,ZNF821,ZNF821,ZNF821,ZNF821	17082,5132,5781,5781,5781,5132
chrX:151081944-151082455	chrX	+	151082217	151082287	True	NR_029973,NM_002362,NM_001011548,NM_001011549,NM_001011550	chrX,chrX,chrX,chrX,chrX	-,+,+,+,+	MIR452,MAGEA4,MAGEA4,MAGEA4,MAGEA4	45947,2421,-907,3109,4472
chr15:56037630-56038546	chr15	+	56037899	56038467	True	NM_173814,NM_001198784	chr15,chr15	-,+	PRTG,FLJ27352	-2722,-337240
chr5:68662773-68663022	chr5	+	68662873	68662976	True	NM_003187,NM_002873,NM_133340,NM_133338,NM_133339,NM_001015892,NM_001015891,NM_133344,NM_133341,NM_016283,NM_133343,NM_133342	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,+,+,+,+,-,-,+,+,-,+,+	TAF9,RAD17,RAD17,RAD17,RAD17,TAF9,TAF9,RAD17,RAD17,TAF9,RAD17,RAD17	2490,3555,3885,2662,4304,2921,2921,2662,3885,2490,2147,2662
chr16:20419710-20419996	chr16	+	20419715	20419797	True	NM_174924,NM_017888	chr16,chr16	-,+	PDILT,ACSM5	-3682,1058
chr8:128493103-128493419	chr8	+	128493169	128493419	True	NM_001159542,NR_024393	chr8,chr8	+,-	POU5F1B,LOC727677	-65364,1017
chr22:39186252-39186892	chr22	+	39186296	39186820	True	NM_005740,NM_004286	chr22,chr22	-,+	DNAL4,GTPBP1	3395,-84540
chr8:72217749-72218678	chr8	+	72218153	72218683	True	NM_172058,NR_033652	chr8,chr8	-,+	EYA1,LOC100132891	50348,536674
chr3:46413349-46413741	chr3	+	46413352	46413723	True	NM_001199149,NM_000579,NM_001100168	chr3,chr3,chr3	-,+,+	LTF,CCR5,CCR5	91495,-1778,-1778
chr19:16681352-16682312	chr19	+	16681409	16682205	True	NM_024881,NM_032207	chr19,chr19	-,+	SLC35E1,C19orf44	1038,-74255
chr18:268688-269251	chr18	+	268789	269116	True	NM_005131,NM_005151	chr18,chr18	-,+	THOC1,USP14	-730,-110357
chr1:228354100-228354437	chr1	+	228354189	228354463	True	NM_181465,NM_001010867	chr1,chr1	-,+	MRPL55,IBA57	-57176,-811
chr1:13639592-13640650	chr1	+	13639845	13639931	True	NM_001012276,NM_001098376,NM_001010890	chr1,chr1,chr1	-,+,+	PRAMEF8,PRAMEF15,PRAMEF9	-28295,2041,2041
chr1:13639592-13640650	chr1	+	13419048	13419134	False	NM_001012276,NM_001098376,NM_001010890	chr1,chr1,chr1	-,+,+	PRAMEF8,PRAMEF15,PRAMEF9	-28283,2041,2041
chr17:39865107-39866081	chr17	+	39865184	39866130	True	NM_001079870,NM_000805	chr17,chr17	-,+	HAP1,GAST	24818,2482
chr4:68567073-68567437	chr4	+	68567133	68567421	True	NR_015439,NM_018227	chr4,chr4	+,-	LOC550112,UBA6	-188,-244
chr5:140559637-140559842	chr5	+	140559715	140559891	True	NM_019120,NM_020957,NM_031947,NM_019119,NM_018940	chr5,chr5,chr5,chr5,chr5	+,+,-,+,+	PCDHB8,PCDHB16,SLC25A2,PCDHB9,PCDHB7	-2336,1088,123771,7001,-7523
chr22:35574693-35575140	chr22	+	35574710	35575109	True	NM_001003681,NM_005368	chr22,chr22	+,-	HMGXB4,MB	78335,438338
chr11:57295833-57296060	chr11	+	57295832	57296094	True	NM_012456,NM_001105565	chr11,chr11	-,+	TIMM10,SMTNL1	2188,14019
chr1:150953711-150954655	chr1	+	150953752	150954614	True	NM_003568,NM_022075,NM_181746	chr1,chr1,chr1	+,-,-	ANXA9,LASS2,LASS2	100,-6312,-6312
chr14:23527302-23527991	chr14	+	23527622	23527902	True	NM_144985,NM_022478,NM_001099780	chr14,chr14,chr14	-,-,+	CDH24,CDH24,PSMB11	-875,-875,-16297
chr9:139643972-139644509	chr9	+	139644034	139644518	True	NM_178469,NR_033913,NM_198946,NM_001001712	chr9,chr9,chr9,chr9	-,+,-,-	LCN8,LOC100128593,LCN6,LCN10	8263,-3472,-1054,-6623
chr21:46294530-46294795	chr21	+	46294544	46294838	True	NM_058190,NM_004339	chr21,chr21	+,-	C21orf70,PTTG1IP	65116,-726
chr12:52628442-52629186	chr12	+	52628621	52629155	True	NM_182507,NM_005556	chr12,chr12	-,+	KRT80,KRT7	-42837,-1718
chr16:46723800-46724057	chr16	+	46723819	46724073	True	NM_014321,NR_037620,NM_018206	chr16,chr16,chr16	+,+,-	ORC6,ORC6,VPS35	-312,-312,-675
chr6:4019052-4020133	chr6	+	4019065	4019959	True	NM_173563,NM_003913	chr6,chr6	-,+	C6orf146,PRPF4B	59555,1609
chr17:54912293-54912539	chr17	+	54912313	54912525	True	NM_001085430,NM_003647	chr17,chr17	-,+	C17orf67,DGKE	-19063,-904
chr12:25404851-25406559	chr12	+	25405067	25406558	True	NM_001001660,NM_004985,NM_033360	chr12,chr12,chr12	+,-,-	LYRM5,KRAS,KRAS	-56968,-1213,-1213
chr1:43274526-43276110	chr1	+	43274704	43275723	True	NM_199342,NM_001017922	chr1,chr1	-,+	CCDC23,ERMAP	7389,7052
chr11:65712824-65713767	chr11	+	65712967	65713807	True	NM_031450,NM_152762	chr11,chr11	-,+	C11orf68,TSGA10IP	-26436,15
chr19:55173400-55173990	chr19	+	55173452	55174034	True	NM_006847,NM_001081438,NM_145057	chr19,chr19,chr19	+,+,-	LILRB4,LILRB4,CDC42EP5	89,89,-189030
chr16:66789393-66791031	chr16	+	66789703	66791072	True	NM_005182,NM_006141	chr16,chr16	+,-	CA7,DYNC1LI2	87209,-4178
chr7:27227862-27228245	chr7	+	27227913	27228245	True	NM_005523,NR_002795,NM_153715,NR_037940,NR_037939	chr7,chr7,chr7,chr7,chr7	-,+,-,-,-	HOXA11,HOXA11-AS1,HOXA10,HOXA10-HOXA9,HOXA10	-3078,-2937,-8037,-8033,-8033
chrX:138285618-138285891	chrX	+	138285763	138285919	True	NR_028597,NM_001139501,NM_001139500,NM_001139498	chrX,chrX,chrX,chrX	+,-,-,-	SRD5A1P1,FGF13,FGF13,FGF13	243058,1316,1316,1316
chr7:139879615-139880359	chr7	+	139880090	139880162	True	NM_030647,NR_024451	chr7,chr7	-,+	JHDM1D,LOC100134229	-3349,-3090
chr9:27116445-27117156	chr9	+	27116636	27116844	True	NM_000459,NM_022901	chr9,chr9	+,-	TEK,LRRC19	-7545,-110945
chr1:20915609-20917080	chr1	+	20915950	20916998	True	NM_001785,NM_005216	chr1,chr1	+,-	CDA,DDOST	-557,71089
chr10:3824744-3825637	chr10	+	3824768	3825644	True	NM_001160125,NM_001160124,NM_002627,NR_027653,NM_001300	chr10,chr10,chr10,chr10,chr10	-,-,+,-,-	KLF6,KLF6,PFKP,KLF6,KLF6	1879,1879,-715075,1879,1879
chr1:159869550-159869911	chr1	+	159869653	159869732	True	NM_012337,NM_020125	chr1,chr1	-,+	CCDC19,SLAMF8	225,-73225
chr1:160366188-160367248	chr1	+	160366446	160367280	True	NM_004371,NM_020335	chr1,chr1	-,+	COPA,VANGL2	-53092,3083
chr14:22042362-22043307	chr14	+	22042479	22043182	True	NM_001001912,NM_001005465	chr14,chr14	+,-	OR4E2,OR10G3	90114,-3604
chrX:153363307-153364292	chrX	+	153363337	153364307	True	NM_020061,NM_001110792,NM_004992	chrX,chrX,chrX	+,-,-	OPN1LW,MECP2,MECP2	45417,-149,-149
chr2:239138990-239139909	chr2	+	239139041	239139746	True	NR_026925,NM_001142853,NR_026926,NM_018645,NR_026923	chr2,chr2,chr2,chr2,chr2	-,-,-,-,+	LOC151174,HES6,LOC151174,HES6,LOC643387	623,8986,623,8986,580
chr10:82114164-82116159	chr10	+	82114277	82115975	True	NM_138812,NM_032372	chr10,chr10	-,+	DYDC1,DYDC2	575,582
chr12:28503409-28504539	chr12	+	28503471	28504429	True	NM_018318,NM_002820	chr12,chr12	+,-	CCDC91,PTHLH	-93390,-378555
chr1:11938997-11939443	chr1	+	11939206	11939462	True	NM_002521,NR_037806	chr1,chr1	-,+	NPPB,NPPA-AS1	-20214,-38881
chr11:61277477-61277858	chr11	+	61277502	61277793	True	NM_001145077,NM_004200	chr11,chr11	+,-	LRRC10B,SYT7	-1281,70555
chr8:17569106-17570004	chr8	+	17569220	17569855	True	NM_001001931,NM_006207	chr8,chr8	-,+	MTUS1,PDGFRL	9938,-135336
chr1:45965209-45965626	chr1	+	45965218	45965675	True	NM_007170,NR_033297,NR_033296,NR_033298,NM_015506	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	TESK2,CCDC163P,CCDC163P,CCDC163P,MMACHC	-8378,126,126,126,180
chr8:29950968-29951868	chr8	+	29951437	29951843	True	NM_001128208,NM_016127,NM_015344	chr8,chr8,chr8	+,-,+	LEPROTL1,TMEM66,LEPROTL1	1078,-10788,1078
chr12:12867779-12868678	chr12	+	12867799	12868701	True	NM_004064,NM_006143	chr12,chr12	+,-	CDKN1B,GPR19	1600,-18678
chr1:32713423-32714113	chr1	+	32713428	32713810	True	NM_032648,NR_026850,NM_005356	chr1,chr1,chr1	+,-,+	FAM167B,MTMR9LP,LCK	-661,-6117,3029
chr15:80350002-80350337	chr15	+	80350088	80350378	True	NM_004049,NM_019006	chr15,chr15	-,+	BCL2A1,ZFAND6	-86445,1642
chr17:60352657-60353095	chr17	+	60352814	60353056	True	NR_027486,NM_001144933	chr17,chr17	-,+	TBC1D3P2,EFCAB3	10,94522
chr17:60352657-60353095	chr17	+	58096403	58096453	False	NM_003161,NR_002924	chr17,chr17	+,-	RPS6KB1,DHX40P1	-126011,-67
chr17:37024780-37025264	chr17	+	37024829	37025294	True	NM_000978,NM_006148	chr17,chr17	-,+	RPL23,LASP1	-14776,817
chr7:27196990-27197205	chr7	+	27197037	27197195	True	NM_152739,NR_002795,NM_024014,NM_006896	chr7,chr7,chr7,chr7	-,+,-,-	HOXA9,HOXA11-AS1,HOXA6,HOXA7	8004,27831,-9669,-741
chr19:45502921-45503189	chr19	+	45503078	45503202	True	NM_145288,NM_006509	chr19,chr19	-,+	ZNF296,RELB	76540,1504
chr12:122667899-122668446	chr12	+	122668129	122668325	True	NM_001014336,NM_001098519	chr12,chr12	-,+	IL31,LRRC43	-9383,-513
chr11:111894515-111895633	chr11	+	111894757	111895572	True	NM_001931,NM_001082619	chr11,chr11	+,-	DLAT,PIH1D2	-35,49373
chr3:129608006-129609313	chr3	+	129608134	129609257	True	NM_001128224,NR_037893,NM_001017395	chr3,chr3,chr3	-,+,-	TMCC1,LOC100507032,TMCC1	3213,3456,-8732
chr8:82024732-82026035	chr8	+	82024838	82026064	True	NM_001444,NM_018440	chr8,chr8	+,-	FABP5,PAG1	166653,-535
chr8:95565974-95566841	chr8	+	95566085	95566652	True	NM_183009,NM_015496,NM_001034915	chr8,chr8,chr8	-,-,+	KIAA1429,KIAA1429,ESRP1	-339,-339,86711
chr12:113770866-113771604	chr12	+	113770871	113771453	True	NM_001159727,NM_024959	chr12,chr12	+,-	PLBD2,SLC24A6	24917,1522
chr21:27601452-27602008	chr21	+	27601481	27601551	True	NM_002040,NM_001136131	chr21,chr21	+,-	GABPA,APP	-494203,-58035
chr5:178448788-178449944	chr5	+	178448857	178449969	True	NM_001136116,NM_000843	chr5,chr5	+,-	ZNF879,GRM6	806,-26733
chr2:97484403-97485236	chr2	+	97484463	97485249	True	NM_017623,NM_144994,NM_199078	chr2,chr2,chr2	+,-,+	CNNM3,ANKRD23,CNNM3	-2523,24559,-2523
chr17:17285813-17286303	chr17	+	17285812	17285992	True	NM_003653,NM_020201	chr17,chr17	-,+	COPS3,NT5M	-101195,-79188
chr6:163140711-163141521	chr6	+	163140739	163141435	True	NM_152410,NM_004562,NM_013987,NM_001080379,NM_001080378,NM_013988	chr6,chr6,chr6,chr6,chr6,chr6	+,-,-,+,+,-	PACRG,PARK2,PARK2,PACRG,PACRG,PARK2	6728,7460,7460,7566,6728,7460
chr13:81915322-81916726	chr13	+	81915461	81916707	True	NM_019080,NM_005842	chr13,chr13	+,-	NDFIP2,SPRY2	-1860263,-1000375
chr17:48072083-48072416	chr17	+	48072086	48072450	True	NM_005220,NM_001934	chr17,chr17	-,+	DLX3,DLX4	188,-22007
chr16:1147836-1148054	chr16	+	1147856	1148030	True	NM_207419,NM_001053	chr16,chr16	-,+	C1QTNF8,SSTR5	-1612,-19126
chr9:37907388-37908655	chr9	+	37907424	37908647	True	NM_024345,NM_033412,NR_024873,NR_024872	chr9,chr9,chr9,chr9	+,-,-,-	DCAF10,MCART1,MCART1,MCART1	-106685,-3074,-3074,-3074
chr1:23406-24071	chr19	+	65183	65721	False	NM_001005240,NR_033266	chr19,chr19	+,-	OR4F17,WASH5P	44957,5295
chr1:23406-24071	chr15	-	102507050	102507588	False	NR_034090	chr15	-	DDX11L9	11758
chr1:23406-24071	chr1	+	23575	24113	True	NM_001005221,NR_028325	chr1,chr1	-,+	OR4F29,LOC100132062	597971,299778
chr1:23406-24071	chr9	+	23890	24226	False	NM_182905,NM_203447	chr9,chr9	-,+	WASH1,DOCK8	5563,190638
chr2:159830525-159831035	chr2	+	159830595	159830892	True	NM_152528,NM_001145909,NM_033394	chr2,chr2,chr2	-,+,+	WDSUB1,TANC1,TANC1	312226,-5500,-5500
chr12:6938195-6938416	chr12	+	6938221	6938395	True	NM_014262,NM_031299,NM_019858,NM_014449	chr12,chr12,chr12,chr12	+,-,+,+	LEPREL2,CDCA3,GPR162,GPR162	-700,22111,-7309,-7309
chr7:150691758-150692220	chr7	+	150691885	150692211	True	NM_172056,NM_000603,NM_001160110,NM_001160111,NM_001160109	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	KCNH2,NOS3,NOS3,NOS3,NOS3	-16483,-3792,-1044,-1044,-1044
chr6:15023402-15023617	chr6	+	15023529	15023627	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	222899,639712
chr8:101968060-101969613	chr8	+	101968065	101968940	True	NM_145690,NM_001135702,NM_001135701,NM_001135700,NM_001135699,NM_003406,NR_033962	chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,-,-,+	YWHAZ,YWHAZ,YWHAZ,YWHAZ,YWHAZ,YWHAZ,FLJ42969	-3708,-5266,-4505,-4505,-2844,-2442,95341
chr17:48353568-48354835	chr17	+	48353657	48354720	True	NM_153229,NM_001168215,NM_000088	chr17,chr17,chr17	+,+,-	TMEM92,TMEM92,COL1A1	-1920,-4941,-74657
chr6:146349035-146349584	chr6	+	146349047	146349491	True	NM_001114329,NM_173082,NM_000838	chr6,chr6,chr6	+,-,+	GRM1,SHPRH,GRM1	-316,-63814,-316
chr17:19315343-19315751	chr17	+	19315491	19315735	True	NM_002404,NM_007148	chr17,chr17	-,+	MFAP4,RNF112	-24959,-1051
chr7:15726174-15726494	chr7	+	15726196	15726494	True	NM_001195280,NM_005924	chr7,chr7	+,-	LOC100506049,MEOX2	840010,-50
chr6:114292250-114292529	chr6	+	114292255	114292535	True	NM_001527,NR_027060,NR_033441	chr6,chr6,chr6	-,+,-	HDAC2,FLJ34503,HDAC2	-34,-66755,-34
chr15:91766906-91768533	chr15	+	91767190	91768400	True	NM_014848,NM_018668	chr15,chr15	+,-	SV2B,VPS33B	-123702,-201357
chr6:15022434-15022766	chr6	+	15022462	15022734	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	223792,640605
chr17:37379711-37380368	chr17	+	37379742	37380410	True	NM_198993,NM_000981	chr17,chr17	-,+	STAC2,RPL19	1680,-23257
chr5:156886026-156886968	chr5	+	156886106	156886874	True	NM_001099287,NM_001001343,NM_001172292	chr5,chr5,chr5	+,-,+	NIPAL4,FNDC9,NIPAL4	152,-113377,152
chr17:37606742-37607400	chr17	+	37606794	37607359	True	NM_004774,NM_015083	chr17,chr17	-,+	MED1,CDK12	218,10379
chr14:27066665-27066988	chr14	+	27066762	27066892	True	NM_002515,NM_006489,NR_036193,NM_006491	chr14,chr14,chr14,chr14	-,-,+,-	NOVA1,NOVA1,MIR4307,NOVA1	118,118,310955,118
chr20:35372598-35373236	chr20	+	35372597	35373156	True	NM_032013,NM_080628,NM_022477	chr20,chr20,chr20	-,+,-	NDRG3,C20orf118,NDRG3	1384,131413,1384
chr17:38118158-38119205	chr17	+	38118263	38118847	True	NM_178171,NM_139280	chr17,chr17	+,-	GSDMA,ORMDL3	378,-34379
chr2:233499985-233500248	chr2	+	233500045	233500241	True	NM_145702,NM_025202	chr2,chr2	-,+	TIGD1,EFHD1	-84819,-1889
chr17:72527501-72528747	chr17	+	72527518	72528788	True	NM_152460,NM_174892	chr17,chr17	+,-	C17orf77,CD300LB	52268,95
chr1:31381919-31382134	chr1	+	31381992	31382104	True	NR_002762,NM_014654	chr1,chr1	+,-	PRO0611,SDC3	78807,-512
chr6:32484206-32485394	chr6	+	32484399	32485441	True	NM_002125,NM_019111	chr6,chr6	-,+	HLA-DRB5,HLA-DRA	12615,-76842
chr4:171007502-171008078	chr4	+	171007803	171008057	True	NM_182662,NM_016228,NM_173872	chr4,chr4,chr4	-,-,+	AADAT,AADAT,CLCN3	3367,3178,-466133
chr8:116680735-116680998	chr8	+	116680764	116680881	True	NM_014112,NM_032334	chr8,chr8	-,+	TRPS1,UTP23	398,1097860
chr1:109825929-109826666	chr1	+	109826158	109826554	True	NM_001408,NM_001005290,NM_032636,NM_001032291	chr1,chr1,chr1,chr1	+,-,-,-	CELSR2,PSRC1,PSRC1,PSRC1	-33568,-368,-368,-368
chr7:76256810-76257590	chr7	+	76256816	76257456	True	NR_029411,NM_152992,NM_012230	chr7,chr7,chr7	+,-,-	LOC100133091,POMZP3,POMZP3	-78209,-196,-196
chr7:76256810-76257590	chr7	+	75072404	75072880	False	NM_001099415,NR_033322	chr7,chr7	-,+	POM121C,NSUN5P1	42746,-32835
chr9:140499425-140499752	chr9	+	140499686	140499760	True	NM_152285,NM_032937	chr9,chr9	+,-	ARRDC1,C9orf37	335,13598
chr19:37152862-37153249	chr19	+	37153052	37153160	True	NM_153257,NM_152603	chr19,chr19	-,+	ZNF461,ZNF567	4633,27141
chrX:117260902-117262221	chrX	+	117261585	117262146	True	NM_001168301,NM_001184965	chrX,chrX	-,+	KLHL13,WDR44	-10282,217889
chr2:157190836-157191259	chr2	+	157191145	157191299	True	NM_001083112,NM_006186	chr2,chr2	+,-	GPD2,NR4A2	100665,-1858
chr8:29205892-29206115	chr8	+	29205951	29206055	True	NM_057158,NM_001394,NM_024567	chr8,chr8,chr8	-,-,+	DUSP4,DUSP4,HMBOX1	317,2262,-457777
chr17:17683673-17684238	chr17	+	17683889	17684281	True	NM_030665,NR_024007	chr17,chr17	+,-	RAI1,SMCR5	-99153,-1046
chr4:144480870-144482771	chr4	+	144480920	144482528	True	NM_001168235,NR_003675	chr4,chr4	-,+	FREM3,LOC441046	139350,-346
chr17:39893076-39893805	chr17	+	39893356	39893626	True	NM_000805,NM_177977,NM_001079870,NM_001079871	chr17,chr17,chr17,chr17	+,-,-,-	GAST,HAP1,HAP1,HAP1	-24802,-2458,-2458,-2458
chr1:21614076-21614948	chr1	+	21614099	21614946	True	NM_001113347,NM_032264,NM_001113349,NM_001397	chr1,chr1,chr1,chr1	-,+,-,-	ECE1,NBPF3,ECE1,ECE1	-7916,151684,1870,2086
chr7:76663522-76664218	chr7	+	76663756	76663984	True	NM_006682,NR_028058	chr7,chr7	-,+	FGL2,LOC100132832	165216,4812
chr7:76663522-76664218	chr7	-	99901387	99901529	False	NM_001004351,NR_028038	chr7,chr7	+,-	SPDYE3,GATS	3795,-31532
chr7:76663522-76664218	chr7	+	72502440	72502668	False	NR_003614,NR_003664	chr7,chr7	+,-	PMS2L2,SPDYE8P	-25811,-2131
chr7:76663522-76664218	chr7	-	74934173	74934401	False	NR_003614,NR_003664	chr7,chr7	-,+	PMS2L2,SPDYE8P	53864,2131
chr7:76663522-76664218	chr7	-	74962198	74962426	False	NR_003614,NR_003664	chr7,chr7	-,+	PMS2L2,SPDYE8P	25839,2133
chr7:112726093-112726918	chr7	+	112726094	112726795	True	NM_001146266,NM_001146267,NM_018970,NM_001146265,NM_182597	chr7,chr7,chr7,chr7,chr7	-,-,-,-,+	GPR85,GPR85,GPR85,GPR85,C7orf53	35,-181,1088,1088,-605079
chr1:156471257-156471866	chr1	+	156471274	156471682	True	NM_001105669,NM_005920	chr1,chr1	+,-	TTC24,MEF2D	77836,-745
chr1:114354829-114355035	chr1	+	114354845	114355061	True	NR_037864,NM_018364	chr1,chr1	+,-	LOC100287722,RSBN1	44195,59
chr11:118779045-118779833	chr11	+	118779231	118779802	True	NM_032966,NM_182557	chr11,chr11	+,-	CXCR5,BCL9L	-15181,1861
chr7:21581442-21582451	chr7	+	21581716	21582384	True	NM_003777,NM_001127370	chr7,chr7	+,-	DNAH11,CDCA7L	448,403209
chr17:19279965-19280945	chr17	+	19280218	19280908	True	NM_001198695,NM_002749,NM_002404,NM_139033,NM_139032,NM_139034	chr17,chr17,chr17,chr17,chr17,chr17	-,+,-,+,+,+	MFAP4,MAPK7,MFAP4,MAPK7,MAPK7,MAPK7	9674,865,9674,125,125,865
chr9:140441730-140442247	chr9	+	140441729	140442069	True	NM_032477,NM_152286,NM_001098537	chr9,chr9,chr9	+,-,-	MRPL41,PNPLA7,PNPLA7	4239,2967,2967
chrX:139866203-139867590	chrX	+	139866403	139867631	True	NM_004065,NR_028344	chrX,chrX	-,+	CDR1,RP1-177G6.2	14,-74531
chr15:41058253-41059737	chr15	+	41058325	41059571	True	NM_018145,NM_001130448,NM_005258	chr15,chr15,chr15	-,+,+	FAM82A2,C15orf62,GCHFR	-10867,2587,-2091
chr20:45279672-45279919	chr20	+	45279671	45279819	True	NM_022829,NM_030777,NM_001193342,NM_001193339	chr20,chr20,chr20,chr20	-,+,-,-	SLC13A3,SLC2A10,SLC13A3,SLC13A3	331,58459,331,331
chr1:92419618-92420933	chr1	+	92420179	92420738	True	NM_207189,NM_001195684,NM_001726	chr1,chr1,chr1	+,-,+	BRDT,TGFBR3,BRDT	-5310,-48620,-2529
chrX:153777489-153778237	chrX	+	153777784	153778292	True	NM_003639,NM_001099856,NM_001099857,NM_001042351,NM_000402,NM_001145255	chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,-,-,+	IKBKG,IKBKG,IKBKG,G6PD,G6PD,IKBKG	-1786,-7389,-2286,-1997,-2551,-2286
chr19:41933363-41933666	chr19	+	41933439	41933715	True	NM_198540,NM_001130514	chr19,chr19	-,+	B3GNT8,C19orf69	970,15347
chr8:93074087-93074835	chr8	+	93074169	93074828	True	NM_004349,NM_052832	chr8,chr8	-,+	RUNX1T1,SLC26A7	413,-812713
chr16:29986200-29987599	chr16	+	29986206	29987312	True	NM_004783,NM_016151,NM_003609	chr16,chr16,chr16	+,+,-	TAOK2,TAOK2,HIRIP3	-1035,-1035,20150
chr9:7475676-7477273	chr9	+	7475919	7476906	True	NM_033428,NM_015061	chr9,chr9	-,+	C9orf123,KDM4C	322954,-718329
chr22:47023027-47023625	chr22	+	47023033	47023667	True	NM_015124,NM_014246	chr22,chr22	+,-	GRAMD4,CELSR1	-426,-89966
chr22:50174548-50174906	chr22	+	50174563	50174955	True	NM_014838,NR_026993	chr22,chr22	+,-	ZBED4,LOC90834	72541,-605
chr3:167178543-167180325	chr3	+	167178837	167180371	True	NM_006217,NM_001122752	chr3,chr3	-,+	SERPINI2,SERPINI1	11503,273060
chr5:126853851-126854485	chr5	+	126854018	126854503	True	NM_130809,NM_001164478	chr5,chr5	+,-	PRRC1,FLJ44606	-760,-444834
chr7:48241238-48241492	chr7	+	48241316	48241384	True	NM_152701,NM_152782	chr7,chr7	+,-	ABCA13,SUN3	-30315,-172600
chr1:226961270-226961948	chr1	+	226961296	226961823	True	NM_002221,NM_000447	chr1,chr1	-,+	ITPKB,PSEN2	-34420,96449
chr1:228134938-228135279	chr1	+	228134950	228135288	True	NM_033131,NM_003395	chr1,chr1	+,-	WNT3A,WNT9A	59434,438
chr12:106750254-106751474	chr12	+	106750405	106751457	True	NM_018082,NM_001160708,NM_006825	chr12,chr12,chr12	+,+,-	POLR3B,POLR3B,CKAP4	-22,402,-108692
chr2:110766184-110767685	chr2	+	110766303	110767731	True	NR_037627,NR_036225	chr2,chr2	+,-	LOC100288570,MIR4267	-61087,59938
chr2:110766184-110767685	chr2	-	111118813	111120241	False	NR_037626,NR_027244	chr2,chr2	+,-	LOC100507334,LOC151009	-115649,21922
chr17:72930924-72931840	chr17	+	72931095	72931708	True	NM_178233,NM_173477	chr17,chr17	+,-	OTOP3,USH1G	188,-11744
chrX:153364885-153366628	chrX	+	153364949	153366114	True	NM_020061,NM_001110792,NM_004992	chrX,chrX,chrX	+,-,-	OPN1LW,MECP2,MECP2	43610,-1761,-1761
chr16:57405448-57405672	chr16	+	57405470	57405586	True	NM_020313,NM_002996	chr16,chr16	-,+	CIAPIN1,CX3CL1	75833,827
chr19:30017981-30018187	chr19	+	30018136	30018228	True	NM_001031726,NM_001146339	chr19,chr19	-,+	C19orf12,VSTM2B	187785,-696
chr7:151656138-151657276	chr7	+	151656451	151657301	True	NM_145292,NM_016203,NR_033169	chr7,chr7,chr7	+,-,+	GALNTL5,PRKAG2,GALNTL5	-3038,-82135,-3038
chr5:145213332-145214424	chr5	+	145213341	145214467	True	NM_205846,NM_182960,NM_138492,NM_152550	chr5,chr5,chr5,chr5	-,-,-,+	PRELID2,PRELID2,PRELID2,SH3RF2	450,450,482,101658
chr17:80676231-80676475	chr17	+	80676234	80676518	True	NM_024619,NM_006822	chr17,chr17	+,-	FN3KRP,RAB40B	-1703,-19636
chr5:178772820-178773250	chr5	+	178772916	178773066	True	NM_021599,NM_014244,NM_025158	chr5,chr5,chr5	-,-,+	ADAMTS2,ADAMTS2,RUFY1	-485,-485,204504
chr18:32339567-32339940	chr18	+	32339570	32339988	True	NM_001390,NM_001391,NM_001112734	chr18,chr18,chr18	+,+,-	DTNA,DTNA,ZSCAN30	-3681,-3681,530258
chr9:95145336-95146701	chr9	+	95145605	95146737	True	NM_001012267,NM_014057	chr9,chr9	+,-	CENPP,OGN	-57935,20256
chr8:496525-496737	chr8	+	496531	496689	True	NM_175075,NM_183421	chr8,chr8	-,+	C8orf42,FBXO25	-1200,-139774
chr15:75132583-75133913	chr15	+	75132854	75133860	True	NM_001030005,NM_001099436	chr15,chr15	+,-	CPLX3,ULK3	-13954,1742
chr20:19998723-19999183	chr20	+	19998797	19999191	True	NM_181527,NM_181528,NM_016100,NM_016652	chr20,chr20,chr20,chr20	+,+,+,-	NAA20,NAA20,NAA20,CRNKL1	-312,-918,-918,37550
chr8:8753469-8754857	chr8	+	8753900	8754660	True	NM_153332,NM_004225	chr8,chr8	+,-	ERI1,MFHAS1	105653,-2769
chr1:154953001-154954217	chr1	+	154953340	154954046	True	NM_025207,NM_001202859,NM_001826,NR_036212,NM_001184892,NM_001184891,NR_024163,NM_001130041,NM_201398,NM_003029	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,-,+,+,+,+,+,-,+,-	FLAD1,SHC1,CKS1B,MIR4258,FLAD1,FLAD1,CKS1B,SHC1,FLAD1,SHC1	1723,-6381,-6282,-5231,1723,1723,-6282,-6381,1723,-6381
chr1:212783223-212784732	chr1	+	212783253	212784764	True	NM_001674,NM_018664,NM_001040619	chr1,chr1,chr1	+,-,+	ATF3,BATF3,ATF3	-1311,88620,-1311
chr6:36302846-36303533	chr6	+	36302998	36303472	True	NM_001010903,NM_001145717	chr6,chr6	-,+	C6orf222,PNPLA1	1240,-64812
chr1:32110671-32110939	chr1	+	32110779	32110981	True	NR_033688,NR_033686,NM_001525,NM_012392	chr1,chr1,chr1,chr1	-,-,+,-	PEF1,PEF1,HCRTR1,PEF1	-561,29,-27529,29
chr19:15312342-15314184	chr19	+	15312575	15314091	True	NM_033025,NM_000435	chr19,chr19	+,-	SYDE1,NOTCH3	-94412,-783
chr18:9112775-9113636	chr18	+	9112939	9113543	True	NM_001042388,NM_021074	chr18,chr18	-,+	PPP4R1,NDUFV2	501107,-10369
chr1:150506071-150507484	chr1	+	150506222	150507383	True	NM_001197320,NM_025008	chr1,chr1	-,+	MCL1,ADAMTSL4	44882,14514
chr13:96743773-96743979	chr13	+	96743801	96744013	True	NM_153456,NM_020121	chr13,chr13	+,-	HS6ST3,UGGT2	-759,-38065
chr8:32424519-32426153	chr8	+	32424648	32426186	True	NM_013964,NM_032664	chr8,chr8	+,-	NRG1,FUT10	-18971,904528
chr1:32482781-32483367	chr1	+	32482898	32483109	True	NM_080391,NM_006559	chr1,chr1	-,+	PTP4A2,KHDRBS1	-78910,-3471
chr1:13183680-13183953	chr1	+	13183699	13183892	True	NM_001100631,NM_001136561	chr1,chr1	+,-	PRAMEF22,LOC440563	-148207,485
chr1:13183680-13183953	chr1	+	12907969	12908162	False	NM_001013631,NM_023014,NM_001146181	chr1,chr1,chr1	-,+,-	HNRNPCL1,PRAMEF2,LOC649330	467,8778,126
chr7:100464851-100465152	chr7	+	100464938	100465058	True	NM_001015072,NM_003302,NM_001128853,NM_001128852,NM_015908,NM_001128854	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,+,+	UFSP1,TRIP6,SRRT,SRRT,SRRT,SRRT	22331,-39,7642,7642,7642,7642
chr15:23378226-23378430	chr15	+	23378390	23378478	True	NR_002824,NR_036470	chr15,chr15	-,+	HERC2P2,HERC2P7	-131,12243
chr2:26699317-26700313	chr2	+	26699753	26700341	True	NM_194322,NM_194323,NM_004802,NM_145038	chr2,chr2,chr2,chr2	-,-,-,+	OTOF,OTOF,OTOF,CCDC164	619,619,619,-75020
chr18:59853575-59853830	chr18	+	59853574	59853766	True	NM_176787,NM_012327,NM_020854	chr18,chr18,chr18	-,-,+	PIGN,PIGN,KIAA1468	573,573,757
chr1:158434529-158435925	chr1	+	158434950	158435964	True	NM_001004473,NM_001004476	chr1,chr1	+,-	OR10K1,OR10K2	-28,-44294
chr14:64809549-64811273	chr14	+	64809711	64811093	True	NM_005956,NR_033777,NM_001040276	chr14,chr14,chr14	+,-,-	MTHFD1,TEX21P,ESR2	43665,3286,-4443
chr11:64879712-64879929	chr11	+	64879864	64879934	True	NM_001997,NR_037568,NR_037567,NM_014205,NM_003273,NM_004927	chr11,chr11,chr11,chr11,chr11,chr11	-,+,+,-,+,+	FAU,MRPL49,MRPL49,ZNHIT2,TM7SF2,MRPL49	9788,9781,9720,5286,-574,9781
chr19:5342869-5343907	chr19	+	5342930	5343370	True	NM_130854,NM_130855,NM_002850,NM_181710,NM_130853	chr19,chr19,chr19,chr19,chr19	-,-,-,+,-	PTPRS,PTPRS,PTPRS,ZNRF4,PTPRS	-2116,-2116,-2116,112055,-2116
chr22:29710112-29710819	chr22	+	29710260	29710740	True	NM_006478,NM_152236,NM_152237,NM_001007279,NM_006477	chr22,chr22,chr22,chr22,chr22	+,+,+,-,-	GAS2L1,GAS2L1,GAS2L1,RASL10A,RASL10A	-7314,-7314,-7314,1058,1058
chrX:48859048-48859558	chrX	+	48859133	48859340	True	NM_001163322,NM_207672,NM_020137	chrX,chrX,chrX	+,-,-	CCDC120,GRIPAP1,GRIPAP1	57175,-458,-458
chr19:18549050-18549272	chr19	+	18549101	18549243	True	NM_032627,NM_001170939,NM_001170938,NM_016368	chr19,chr19,chr19,chr19	+,-,-,-	SSBP4,ISYNA1,ISYNA1,ISYNA1	-19006,-180,2,2
chr1:67517112-67519098	chr1	+	67517710	67518933	True	NM_144701,NM_015139	chr1,chr1	+,-	IL23R,SLC35D1	113235,1197
chr12:120884074-120884402	chr12	+	120884088	120884156	True	NM_016399,NM_176818,NM_004373,NR_033684	chr12,chr12,chr12,chr12	-,+,+,+	TRIAP1,GATC,COX6A1,GATC	109,84,-8235,84
chr14:31027411-31027911	chr14	+	31027432	31027939	True	NM_017769,NR_030354	chr14,chr14	+,-	G2E3,MIR624	389,456059
chr22:22854883-22855733	chr22	+	22855411	22855547	True	NR_027426,NM_080764	chr22,chr22	+,-	LOC648691,ZNF280B	46208,8014
chr16:67838872-67839963	chr16	+	67838904	67839937	True	NM_018430,NM_020850	chr16,chr16	+,-	TSNAXIP1,RANBP10	1072,668
chr13:23499943-23500151	chr13	+	23499942	23500162	True	NM_000231,NR_033774	chr13,chr13	+,-	SGCG,BASP1P1	254897,-27622
chr13:23499943-23500151	chr13	+	24912578	24912642	False	NM_178540,NM_006437	chr13,chr13	+,-	C1QTNF9,PARP4	-28924,174356
chr14:96179774-96180143	chr14	+	96179838	96180060	True	NM_001098725,NM_004918,NM_021966	chr14,chr14,chr14	-,+,-	TCL1A,TCL1B,TCL1A	523,-27136,523
chr11:85952329-85953458	chr11	+	85952335	85953459	True	NM_152991,NM_003797,NM_007166	chr11,chr11,chr11	+,+,-	EED,EED,PICALM	2355,2355,-172227
chr7:99914206-99914499	chr7	+	99914215	99914359	True	NM_001004351,NR_003613	chr7,chr7	+,-	SPDYE3,PMS2P1	-8941,19621
chr10:46971253-46971823	chr10	+	46971253	46971702	True	NM_014696,NM_181519,NM_031912	chr10,chr10,chr10	+,-,-	GPRIN2,SYT15,SYT15	21843,-652,-652
chr11:67406719-67406960	chr11	+	67406722	67406952	True	NM_007103,NM_181843,NM_005995	chr11,chr11,chr11	+,-,-	NDUFV1,NUDT8,TBX10	-32450,-9321,129
chr20:31330619-31330903	chr20	+	31330654	31330916	True	NM_006892,NM_001099339,NM_053041	chr20,chr20,chr20	+,-,-	DNMT3B,COMMD7,COMMD7	19274,948,948
chr10:97205541-97206628	chr10	+	97205697	97206522	True	NM_006434,NM_207321,NM_001034956,NM_001034957,NM_001034954,NM_001034955	chr10,chr10,chr10,chr10,chr10,chr10	-,+,-,-,-,-	SORBS1,C10orf129,SORBS1,SORBS1,SORBS1,SORBS1	-4760,-251791,-4760,-4760,-4760,-4760
chr6:144328480-144329011	chr6	+	144328667	144328976	True	NM_002656,NR_002768,NM_001080953,NM_001080952,NM_006718,NM_001080956,NM_003764,NM_001080954	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,-,-,-,+,-	PLAGL1,HYMAI,PLAGL1,PLAGL1,PLAGL1,PLAGL1,STX11,PLAGL1	615,941,615,615,615,615,142677,615
chr1:236553575-236554430	chr1	+	236553969	236554201	True	NM_145861,NM_019891,NM_080738	chr1,chr1,chr1	+,-,+	EDARADD,ERO1LB,EDARADD	3478,-108630,4514
chr6:57063920-57064773	chr6	+	57064193	57064784	True	NM_183227,NM_004282	chr6,chr6	-,+	RAB23,BAG2	21529,-27140
chrX:43829308-43830133	chrX	+	43829367	43830155	True	NM_000266,NM_000240	chrX,chrX	-,+	NDP,MAOA	2816,-314017
chr15:45425627-45425993	chr15	+	45425626	45425958	True	NM_144565,NM_175940,NM_017434	chr15,chr15,chr15	-,+,+	DUOXA1,DUOX1,DUOX1	-3569,-3485,-3485
chr1:213223455-213224343	chr1	+	213223463	213224385	True	NM_012424,NM_144567,NM_001136138	chr1,chr1,chr1	+,-,+	RPS6KC1,ANGEL2,RPS6KC1	202,-34295,202
chr16:15982100-15983277	chr16	+	15982147	15983297	True	NM_144600,NM_004996	chr16,chr16	-,+	FOPNL,ABCC1	-118,60136
chr17:37321789-37322021	chr17	+	37321911	37322037	True	NM_000981,NM_001143968	chr17,chr17	+,-	RPL19,ARL5C	34498,427
chr3:39162994-39163706	chr3	+	39163042	39163445	True	NM_031899,NM_145755	chr3,chr3	-,+	GORASP1,TTC21A	-13912,-13941
chr10:102279906-102280354	chr10	+	102279931	102280161	True	NM_017902,NM_015490,NM_005004	chr10,chr10,chr10	+,-,-	HIF1AN,SEC31B,NDUFB8	15479,-336,9525
chr1:65433002-65433512	chr1	+	65433031	65433477	True	NM_203464,NM_002227	chr1,chr1	+,-	AK4,JAK1	179754,-844
chr15:54269206-54269547	chr15	+	54269287	54269560	True	NM_182758,NM_001080534	chr15,chr15	-,+	WDR72,UNC13C	-217428,35540
chr11:108369157-108369822	chr11	+	108369183	108369692	True	NM_153705,NM_004398	chr11,chr11	-,+	KDELC2,DDX10	-24,166123
chr5:6715120-6715982	chr5	+	6715188	6715970	True	NM_001171805,NR_037947,NM_006999	chr5,chr5,chr5	+,-,+	PAPD7,NSUN2,PAPD7	-529,-81715,-529
chr12:3001768-3002645	chr12	+	3002073	3002454	True	NM_202003,NM_001160408,NM_003324	chr12,chr12,chr12	-,+,+	FOXM1,TULP3,TULP3	-15770,-2091,-2091
chr11:824831-826078	chr11	+	824872	826086	True	NM_001039490,NM_021128,NM_173584,NM_020376,NM_139030,NM_004357,NM_139029	chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,-,+,+,+,+,+	CD151,POLR2L,EFCAB4A,PNPLA2,CD151,CD151,CD151	6865,16493,1498,-6022,6865,6865,6865
chr1:22329061-22330147	chr1	+	22329264	22329948	True	NM_005529,NM_005747	chr1,chr1	-,+	HSPG2,CELA3A	-65514,-1166
chr10:88124438-88124638	chr10	+	88124573	88124687	True	NM_017551,NM_001030015	chr10,chr10	-,+	GRID1,OPN4	1613,289626
chr9:131452664-131453560	chr9	+	131452791	131453597	True	NM_001122821,NM_003011,NM_032799	chr9,chr9,chr9	+,+,-	SET,SET,ZDHHC12	-6908,-1333,32868
chr7:5602780-5603224	chr7	+	5602785	5603121	True	NM_001101,NM_003088	chr7,chr7	-,+	ACTB,FSCN1	-32553,29332
chr21:36057859-36058422	chr21	+	36057890	36058182	True	NM_004414,NM_053277	chr21,chr21	-,+	RCAN1,CLIC6	-70508,-16253
chr10:104629679-104629909	chr10	+	104629705	104629903	True	NM_000102,NM_020682	chr10,chr10	-,+	CYP17A1,AS3MT	-32415,-546
chr10:43930092-43930773	chr10	+	43930433	43930669	True	NR_026693,NM_001098204	chr10,chr10	+,-	ZNF487P,HNRNPF	1904,-25737
chr12:8852077-8852551	chr12	+	8852270	8852606	True	NM_003480,NM_020734	chr12,chr12	-,+	MFAP5,RIMKLB	-36837,-1811
chr9:35746705-35748514	chr9	+	35746971	35748407	True	NM_020944,NM_001080496,NM_001044264	chr9,chr9,chr9	-,+,-	GBA2,RGP1,MSMP	875,869,5924
chr16:69421012-69421367	chr16	+	69421011	69421415	True	NM_030579,NM_005652	chr16,chr16	+,-	CYB5B,TERF2	37082,-1137
chr1:53021739-53023531	chr1	+	53021924	53022853	True	NM_001009881,NM_015696,NM_015269	chr1,chr1,chr1	-,+,-	ZCCHC11,GPX7,ZCCHC11	-3162,45189,-3162
chr7:148581488-148581696	chr7	+	148581516	148581690	True	NM_152998,NM_003592,NM_004456,NM_001203247,NM_001203248,NM_001203249	chr7,chr7,chr7,chr7,chr7,chr7	-,+,-,-,-,-	EZH2,CUL1,EZH2,EZH2,EZH2,EZH2	-75,-185634,-75,-75,-75,-915
chr2:142888977-142890126	chr2	+	142889019	142889895	True	NM_018557,NM_001032998	chr2,chr2	-,+	LRP1B,KYNU	12,745299
chr8:110116052-110117075	chr8	+	110116053	110117080	True	NM_001128211,NM_003301	chr8,chr8	-,+	NUDCD1,TRHR	225137,-16436
chr7:99035378-99036149	chr7	+	99035581	99036128	True	NM_015545,NM_006693,NM_001081559	chr7,chr7,chr7	-,+,+	PTCD1,CPSF4,CPSF4	384,434,434
chr12:66218995-66219209	chr12	+	66219003	66219075	True	NM_003483,NR_026825,NM_003484	chr12,chr12,chr12	+,-,+	HMGA2,RPSAP52,HMGA2	-814,1729,-814
chr14:77294727-77294927	chr14	+	77294728	77294934	True	NM_015305,NM_194287	chr14,chr14	-,+	ANGEL1,C14orf166B	-15445,-2054
chr19:4302491-4302790	chr19	+	4302546	4302606	True	NM_001169126,NM_024333,NM_144615	chr19,chr19,chr19	-,+,-	TMIGD2,FSD1,TMIGD2	-118,1984,-118
chrY:26358342-26359683	chrY	+	26358787	26359714	True	NR_002195,NR_001526,NR_001555	chrY,chrY,chrY	-,+,-	GOLGA2P3Y,TTTY17A,GOLGA2P2Y	1314,271764,1314
chrY:26358342-26359683	chrY	-	27602721	27603648	False	NR_002179,NR_002195,NR_001555	chrY,chrY,chrY	-,+,+	TTTY17C,GOLGA2P3Y,GOLGA2P2Y	-271801,-1314,-1314
chr19:6769417-6769741	chr19	+	6769417	6769521	True	NM_005490,NM_005428	chr19,chr19	-,+	SH2D3A,VAV1	-1894,3200
chr5:34689831-34690702	chr5	+	34690108	34690728	True	NM_001145521,NM_001145523,NM_001145525,NR_026591	chr5,chr5,chr5,chr5	+,+,+,-	RAI14,RAI14,RAI14,RAD1	-5548,-2496,-5548,225053
chr7:158624048-158624256	chr7	+	158624136	158624233	True	NM_018051,NM_020728	chr7,chr7	+,-	WDR60,ESYT2	25035,-1817
chr2:131487494-131487695	chr2	+	131487504	131487716	True	NM_207364,NM_001079530	chr2,chr2	+,-	GPR148,CFC1B	-912,-130253
chr17:62970324-62971333	chr17	+	62970486	62971185	True	NR_026903,NM_001165933	chr17,chr17	-,+	AMZ2P1,RGS9	569,162270
chr1:20466344-20466637	chr1	+	20466505	20466679	True	NM_022819,NM_012400	chr1,chr1	+,-	PLA2G2F,PLA2G2D	-733,-20497
chr6:144163808-144164073	chr6	+	144163807	144164036	True	NM_001080952,NM_032860	chr6,chr6	-,+	PLAGL1,LTV1	165556,471
chr16:29690033-29690402	chr16	+	29690069	29690247	True	NR_002593,NM_014298	chr16,chr16	-,+	SLC7A5P1,QPRT	-65031,193
chr6:87867447-87868314	chr6	+	87867785	87868087	True	NM_000735,NM_015021	chr6,chr6	-,+	CGA,ZNF292	-62961,-2581
chr3:186479879-186480784	chr3	+	186479904	186480281	True	NM_001967,NM_002916	chr3,chr3	+,-	EIF4A2,RFC4	21079,44070
chr11:57228726-57229278	chr11	+	57228838	57229248	True	NM_017611,NM_178570	chr11,chr11	-,+	SLC43A3,RTN4RL2	-33785,-551
chr8:23544397-23545176	chr8	+	23544503	23545051	True	NM_006167,NM_016612	chr8,chr8	-,+	NKX3-1,SLC25A37	-4053,-158198
chr2:68755237-68755539	chr2	+	68755359	68755575	True	NM_173545,NM_001024680	chr2,chr2	+,-	APLF,FBXO48	-60719,-60969
chr3:52567641-52567864	chr3	+	52567653	52567905	True	NM_001124767,NM_001134231,NM_022908	chr3,chr3,chr3	+,-,-	C3orf78,NT5DC2,NT5DC2	2715,-18,1238
chr3:183902571-183903495	chr3	+	183902745	183903377	True	NM_005787,NM_018358	chr3,chr3	-,+	ALG3,ABCF3	63432,485
chr5:118786654-118788313	chr5	+	118787225	118788315	True	NM_173666,NM_000414,NM_001199292,NM_001199291	chr5,chr5,chr5,chr5	-,+,+,+	DTWD2,HSD17B4,HSD17B4,HSD17B4	-462985,100,100,-114
chr1:228193684-228194095	chr1	+	228193690	228194134	True	NM_033131,NM_003395	chr1,chr1	+,-	WNT3A,WNT9A	588,-58014
chr9:19750956-19751355	chr9	+	19751041	19751397	True	NM_001193288,NM_001010887	chr9,chr9	-,+	SLC24A2,ACER2	37248,-342175
chr10:135089521-135089747	chr10	+	135089525	135089693	True	NM_001164490,NM_001109,NM_145806,NM_001164489	chr10,chr10,chr10,chr10	-,-,+,-	ADAM8,ADAM8,ZNF511,ADAM8	764,764,32729,764
chr1:206328675-206328994	chr1	+	206328789	206329023	True	NM_001007544,NM_148964	chr1,chr1	-,+	C1orf186,CTSE	-40142,-11381
chr1:897306-898256	chr1	+	897312	898214	True	NM_015658,NM_198317,NM_001160184,NM_032129	chr1,chr1,chr1,chr1	-,+,+,+	NOC2L,KLHL17,PLEKHN1,PLEKHN1	-2633,-1396,3662,3662
chr22:44208432-44208648	chr22	+	44208451	44208663	True	NM_025225,NM_198856,NM_022785	chr22,chr22,chr22	+,-,-	PNPLA3,EFCAB6,EFCAB6	110955,-234,-234
chr22:42528594-42528856	chr22	+	42528601	42528891	True	NM_001025161,NM_000106,NR_034118	chr22,chr22,chr22	-,-,+	CYP2D6,CYP2D6,LOC100132273	-1718,-1718,-41715
chr22:19710274-19710594	chr22	+	19710314	19710558	True	NM_024627,NM_001009939,NM_002688,NR_037611,NR_037612,NM_000407	chr22,chr22,chr22,chr22,chr22,chr22	-,+,+,+,+,+	C22orf29,SEPT5,SEPT5,SEPT5-GP1BB,SEPT5-GP1BB,GP1BB	131863,-4407,-8378,-5622,-4373,507
chr1:202114197-202114485	chr1	+	202114239	202114417	True	NM_004767,NM_138795	chr1,chr1	+,-	GPR37L1,ARL8A	-22261,-373
chr17:42927099-42927778	chr17	+	42927147	42927745	True	NM_016438,NM_001080383	chr17,chr17	+,-	HIGD1B,GJC1	-1919,-18968
chr11:118763426-118764489	chr11	+	118763659	118764361	True	NM_001716,NM_182557,NM_032966	chr11,chr11,chr11	+,-,+	CXCR5,BCL9L,CXCR5	-9173,17302,-45
chr3:73674144-73674589	chr3	+	73674146	73674633	True	NM_018029,NM_015009	chr3,chr3	+,-	EBLN2,PDZRN3	-563387,-74
chr17:26684923-26685259	chr17	+	26684981	26685275	True	NM_001080837,NM_015584,NM_152464	chr17,chr17,chr17	-,-,+	SEBOX,POLDIP2,TMEM199	7040,-378,-345
chr2:167913689-167913983	chr2	+	167913689	167914019	True	NM_002976,NM_001199144	chr2,chr2	-,+	SCN7A,XIRP2	-570211,129773
chrX:153239634-153241254	chrX	+	153239662	153240559	True	NR_036174,NM_005334,NM_003492,NR_036175	chrX,chrX,chrX,chrX	+,-,+,-	MIR3202-1,HCFC1,TMEM187,MIR3202-2	5988,-2843,-1722,6119
chr22:50781374-50781640	chr22	+	50781426	50781623	True	NM_001001794,NM_014678	chr22,chr22	-,+	FAM116B,PPP6R2	-15937,136
chr13:50263918-50264999	chr13	+	50263959	50264995	True	NM_032565,NM_138450	chr13,chr13	-,+	EBPL,ARL11	678,-61576
chr5:93961381-93961862	chr5	+	93961381	93961651	True	NM_001145678,NM_173665,NM_032290	chr5,chr5,chr5	-,-,+	KIAA0825,KIAA0825,ANKRD32	-7072,-7072,-7043
chrX:19992922-19993552	chrX	+	19993226	19993331	True	NM_001173456,NM_198279	chrX,chrX	+,-	PDHA1,CXorf23	-631274,-4844
chr10:121296817-121297833	chr10	+	121296936	121297790	True	NM_001005339,NM_002925,NM_004281	chr10,chr10,chr10	-,-,+	RGS10,RGS10,BAG3	4482,-891,113091
chr16:49315929-49316160	chr16	+	49315934	49316108	True	NM_144602,NM_004352	chr16,chr16	+,-	C16orf78,CBLN1	91699,-192
chr11:110582571-110582794	chr11	+	110582594	110582774	True	NM_020809,NM_004109	chr11,chr11	-,+	ARHGAP20,FDX1	727,-282051
chrX:133934462-133936002	chrX	+	133934483	133935973	True	NM_001170779,NM_001170782,NM_001166599,NM_001170757,NM_001170756,NM_001166600,NM_001170783,NM_001170784,NM_001170780,NM_138819,NM_001170781,NM_145284	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,-,-,-,-,+,+,+,+,+,-	FAM122C,FAM122C,FAM122B,FAM122B,FAM122B,FAM122B,FAM122C,FAM122C,FAM122C,FAM122C,FAM122C,FAM122B	5249,5231,-3298,-3221,-4098,-3221,5249,5231,-4095,5249,5249,-4098
chr17:16894051-16894810	chr17	+	16894071	16894155	True	NM_015134,NM_012452	chr17,chr17	+,-	MPRIP,TNFRSF13B	51951,-18669
chr17:8127144-8127694	chr17	+	8127261	8127703	True	NR_026951,NM_012393	chr17,chr17	-,+	C17orf44,PFAS	100,24892
chr1:93541138-93542351	chr1	+	93541415	93542156	True	NM_001167830,NM_001164392,NM_001164393,NM_007358,NM_001164391	chr1,chr1,chr1,chr1,chr1	-,+,+,+,+	TMED5,MTF2,MTF2,MTF2,MTF2	104153,2635,2635,2635,2635
chr16:50582978-50583403	chr16	+	50583052	50583422	True	NM_001144972,NM_033119	chr16,chr16	-,+	SNX20,NKD1	131892,-862
chr2:61406568-61407188	chr2	+	61406617	61407215	True	NM_152392,NR_036496	chr2,chr2	+,-	AHSA2,LOC339803	-2113,-34507
chr16:90040415-90040680	chr16	+	90040415	90040579	True	NR_003227,NR_003226,NR_003228,NM_145039	chr16,chr16,chr16,chr16	+,+,+,-	AFG3L1P,AFG3L1P,AFG3L1P,CENPBD1	-1491,-1491,-1491,-1175
chr16:15246750-15247146	chr16	+	15247034	15247096	True	NM_015027,NR_037466	chr16,chr16	+,-	PDXDC1,MIR3180-4	-178253,1813
chr16:15246750-15247146	chr16	+	2184333	2184395	False	NM_001009944,NM_000296,NR_037467,NM_014353	chr16,chr16,chr16,chr16	-,-,-,+	PKD1,PKD1,MIR3180-5,RAB26	1554,1554,1785,14255
chr16:15246750-15247146	chr16	-	16405541	16405592	False	NR_036142,NR_036447,NR_036141,NM_001079528,NR_036144	chr16,chr16,chr16,chr16,chr16	+,+,+,-,+	MIR3180-2,PKD1P1,MIR3180-1,ABCC6,MIR3180-3	-1857,5873,-1861,-88213,-1861
chr16:15246750-15247146	chr16	-	15006874	15006936	False	NR_036142,NR_023387,NR_036141,NR_036144	chr16,chr16,chr16,chr16	+,-,+,+	MIR3180-2,ABCC6P2,MIR3180-1,MIR3180-3	-1844,-88315,-1848,-1848
chr7:157130354-157131743	chr7	+	157130477	157131755	True	NR_029689,NM_058246,NM_005494	chr7,chr7,chr7	-,+,+	MIR153-2,DNAJB6,DNAJB6	235409,-824,-825
chr12:129338868-129339200	chr12	+	129338872	129339040	True	NM_145648,NM_144669	chr12,chr12	-,+	SLC15A4,GLT1D1	-30331,-842
chr12:53495403-53496679	chr12	+	53496323	53496718	True	NM_002178,NM_003578,NM_032840	chr12,chr12,chr12	+,+,-	IGFBP6,SOAT2,SPRYD3	-4945,555,-23119
chr8:145667686-145668754	chr8	+	145667745	145668775	True	NM_145754,NM_013432	chr8,chr8	+,-	KIFC2,TONSL	22962,1087
chr16:66835335-66835537	chr16	+	66835340	66835504	True	NM_005182,NM_001136505	chr16,chr16	+,-	CA7,CCDC79	42777,69
chr1:52521627-52521892	chr1	+	52521636	52521772	True	NR_024350,NM_001136497,NM_152265,NM_015913	chr1,chr1,chr1,chr1	+,+,+,-	BTF3L4,BTF3L4,BTF3L4,TXNDC12	84,84,84,-589
chr18:21080453-21081824	chr18	+	21080624	21081823	True	NM_013326,NM_032933	chr18,chr18	+,-	C18orf8,C18orf45	1638,-62699
chr6:105303172-105304497	chr6	+	105303471	105304304	True	NM_001004317,NM_020771	chr6,chr6	+,-	LIN28B,HACE1	100618,3548
chr12:104685547-104686465	chr12	+	104685604	104686158	True	NM_006166,NM_003330,NM_182743,NM_182729,NM_182742	chr12,chr12,chr12,chr12,chr12	-,+,+,+,+	NFYB,TXNRD1,TXNRD1,TXNRD1,TXNRD1	-153564,-4936,-4936,-4936,-4936
chr7:17910719-17911705	chr7	+	17911013	17911700	True	NM_001204144,NM_015132	chr7,chr7	+,-	HDAC9,SNX13	214871,68482
chr1:28920017-28920226	chr1	+	28920022	28920268	True	NM_152304,NR_024127,NM_001193532	chr1,chr1,chr1	+,-,+	RAB42,SNHG12,RAB42	-1361,-11656,-1066
chr5:121477295-121478873	chr5	+	121477406	121478886	True	NM_002317,NM_207317	chr5,chr5	-,+	LOX,ZNF474	-63351,-12242
chr20:29872574-29873743	chr20	+	29872868	29873732	True	NM_001037731,NM_001037730	chr20,chr20	-,+	DEFB116,DEFB115	22706,-27452
chr12:7052708-7053028	chr12	+	7052748	7052988	True	NM_138425,NM_080548,NM_080549,NR_003010,NM_002831	chr12,chr12,chr12,chr12,chr12	+,+,+,-,+	C12orf57,PTPN6,PTPN6,SCARNA12,PTPN6	214,2751,7445,23833,7445
chr14:54421146-54421464	chr14	+	54421150	54421458	True	NM_130850,NM_001202,NM_130851,NM_001130851	chr14,chr14,chr14,chr14	-,-,-,+	BMP4,BMP4,BMP4,CDKN3	2146,2146,-60,442214
chr11:6415525-6415926	chr11	+	6415543	6415943	True	NM_000543,NM_001164,NM_001007593	chr11,chr11,chr11	+,-,+	SMPD1,APBB1,SMPD1	-3950,24407,-3950
chr8:76471630-76473423	chr8	+	76471814	76473357	True	NM_004133,NR_024360	chr8,chr8	+,-	HNF4G,LOC100192378	-19662,1122210
chr17:46653613-46653981	chr17	+	46653619	46653769	True	NM_024015,NR_029608,NM_002146,NR_033201	chr17,chr17,chr17,chr17	-,-,-,+	HOXB4,MIR10A,HOXB3,LOC404266	2024,3590,-1809,14053
chr5:69712243-69713512	chr5	+	69712542	69713017	True	NR_033417,NR_033968	chr5,chr5	+,-	GTF2H2B,LOC100049076	-1402,138190
chr5:69712243-69713512	chr5	-	70361680	70362155	False	NM_022877,NM_001515	chr5,chr5	+,-	SMN2,GTF2H2	-140970,1398
chr5:69712243-69713512	chr5	+	68857395	68857868	False	NR_027439,NM_001042490,NM_001098728	chr5,chr5,chr5	-,+,+	LOC100272216,GTF2H2D,GTF2H2C	71217,-1378,-1401
chr16:1279553-1279876	chr16	+	1279553	1279681	True	NM_012467,NM_024164,NM_003294	chr16,chr16,chr16	-,-,+	TPSG1,TPSB2,TPSAB1	-4299,554,10996
chr16:1279553-1279876	chr16	-	1291288	1291338	False	NM_024164,NM_003294	chr16,chr16	-,+	TPSB2,TPSAB1	-11103,-661
chr8:11139354-11139681	chr8	+	11139370	11139488	True	NM_173683,NM_015458	chr8,chr8	-,+	XKR6,MTMR9	-80495,2511
chr9:138393842-138394122	chr9	+	138393869	138394021	True	NM_016034,NM_001048265,NM_144654	chr9,chr9,chr9	+,-,-	MRPS2,C9orf116,C9orf116	-1437,-2108,-2108
chr10:121348876-121350076	chr10	+	121349213	121349842	True	NM_001033925,NM_004281,NM_003252	chr10,chr10,chr10	-,+,-	TIAL1,BAG3,TIAL1	6749,61039,6749
chr1:161576820-161577031	chr1	+	161576926	161577010	True	NM_000570,NR_024151	chr1,chr1	-,+	FCGR3B,HSPA7	24198,-1128
chr1:151226281-151226696	chr1	+	151226463	151226609	True	NM_005997,NM_002810	chr1,chr1	-,+	VPS72,PSMD4	-63823,587
chr5:53811239-53812831	chr5	+	53811267	53812656	True	NM_052870,NM_001145427,NM_019087,NM_001102575	chr5,chr5,chr5,chr5	+,+,-,+	SNX18,SNX18,ARL15,SNX18	936,932,-204864,936
chr15:86717693-86719688	chr15	+	86717695	86719515	True	NM_022480,NM_152336	chr15,chr15	-,+	KLHL25,AGBL1	-379506,-32512
chr8:17434249-17434864	chr8	+	17434308	17434830	True	NM_020749,NM_006207	chr8,chr8	-,+	MTUS1,PDGFRL	120466,-417
chr7:50798676-50799680	chr7	+	50798679	50799520	True	NM_001001549,NM_005311,NR_033845	chr7,chr7,chr7	-,-,+	GRB10,GRB10,LOC100129427	580,580,-199273
chr1:9295791-9296206	chr1	+	9295948	9296094	True	NM_004285,NR_029610	chr1,chr1	+,-	H6PD,MIR34A	-1145,-84112
chr16:4586798-4587494	chr16	+	4586941	4587401	True	NM_001199055,NM_001199054,NM_013399,NM_001199056,NM_001145011	chr16,chr16,chr16,chr16,chr16	-,-,-,-,+	C16orf5,C16orf5,C16orf5,C16orf5,LOC342346	1465,1120,1465,1465,19089
chr20:62588691-62589007	chr20	+	62588744	62589018	True	NM_017859,NM_001193379,NR_027287	chr20,chr20,chr20	-,-,+	UCKL1,UCKL1,UCKL1-AS1	-944,-6217,-4058
chr1:24195467-24196034	chr1	+	24195492	24195888	True	NM_000147,NM_007260	chr1,chr1	-,+	FUCA1,LYPLA2	-633,-77898
chr2:33068553-33069390	chr2	+	33068640	33069293	True	NM_021209,NR_027098	chr2,chr2	-,+	NLRC4,LOC285045	-577828,-18189
chr19:11910630-11911494	chr19	+	11910828	11911249	True	NM_152356,NM_001080493	chr19,chr19	+,-	ZNF491,ZNF823	-1489,-61068
chr21:27542261-27542630	chr21	+	27542447	27542511	True	NM_201413,NM_000484,NM_001204302,NM_201414,NM_001204301,NM_001136129,NM_002040,NM_001136131,NM_001136130,NM_001204303	chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21	-,-,-,-,-,-,+,-,-,-	APP,APP,APP,APP,APP,APP,GABPA,APP,APP,APP	677,677,677,677,677,677,-435169,985,677,677
chr9:100955730-100956424	chr9	+	100955834	100956290	True	NM_018946,NM_052820	chr9,chr9	+,-	NANS,CORO2A	-136926,-878
chr6:89826416-89827210	chr6	+	89826567	89827100	True	NM_001010853,NM_080743	chr6,chr6	+,-	PM20D2,SRSF12	28668,750
chr19:11973018-11974268	chr19	+	11973334	11973958	True	NM_152262,NM_001080493	chr19,chr19	+,-	ZNF439,ZNF823	2885,-123574
chr6:131907462-131909066	chr6	+	131907597	131909097	True	NM_015979,NM_000045	chr6,chr6	-,+	MED23,ARG1	40317,-13297
chr16:71741151-71742193	chr16	+	71741217	71741845	True	NM_015020,NR_033337,NM_001017967	chr16,chr16,chr16	-,-,+	PHLPP2,SNORA70D,MARVELD3	6909,-8613,-81199
chr6:35226955-35227193	chr6	+	35227051	35227203	True	NM_018679,NM_003427	chr6,chr6	-,+	TCP11,ZNF76	-117864,306
chr3:101273930-101275855	chr3	+	101274236	101275681	True	NM_020654,NM_017819	chr3,chr3	-,+	SENP7,RG9MTD1	-42151,5030
chr16:86610941-86611301	chr16	+	86611091	86611350	True	NM_005250,NR_027490	chr16,chr16	+,-	FOXL1,MTHFSD	764,-22250
chr6:159069545-159071074	chr6	+	159069664	159070836	True	NM_006519,NM_001009991	chr6,chr6	-,+	DYNLT1,SYTL3	-3860,209
chr1:39545496-39546021	chr1	+	39545703	39545999	True	NM_017821,NM_012090	chr1,chr1	-,+	RHBDL2,MACF1	-138247,1089
chr11:65233226-65233457	chr11	+	65233225	65233485	True	NR_030343,NM_182556	chr11,chr11	+,-	MIR612,SLC25A45	-21347,-83083
chr20:46606732-46607277	chr20	+	46606813	46607277	True	NR_026958,NM_198596	chr20,chr20	+,-	LOC284749,SULF2	381376,-191453
chr20:46606732-46607277	chr20	-	46997017	46997368	False	NR_026958,NM_020820	chr20,chr20	+,-	LOC284749,PREX1	-8414,447102
chrX:47931298-47931511	chrX	+	47931373	47931559	True	NM_001190255,NM_001037735,NR_028366,NR_033730	chrX,chrX,chrX,chrX	-,-,+,-	ZNF630,ZNF630,SSX6,ZNF630	-372,-865,35807,-348
chr12:133533933-133535208	chr12	+	133533986	133535077	True	NM_183238,NM_019591,NM_001164715	chr12,chr12,chr12	-,+,-	ZNF605,ZNF26,ZNF605	-1118,27978,-1094
chr15:83680468-83680988	chr15	+	83680469	83680980	True	NR_027649,NM_031452,NR_027650,NM_001160114,NM_001160115,NM_001160116,NM_001160113,NM_144597	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,+,-,-,-,-,-,-	C15orf40,FAM103A1,C15orf40,C15orf40,C15orf40,C15orf40,C15orf40,C15orf40	-76,-25525,-76,-76,-76,-76,-76,-76
chr17:42266238-42267112	chr17	+	42266294	42267118	True	NM_024107,NM_001098833,NM_178542,NM_001076674,NM_020218,NM_177441	chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,+,-,+	TMUB2,ATXN7L3,C17orf65,TMUB2,ATXN7L3,TMUB2	-1991,8461,-2212,-1991,8461,-1771
chr10:43761259-43761468	chr10	+	43761318	43761468	True	NM_001184963,NM_145313	chr10,chr10	+,-	FXYD4,RASGEF1A	105623,949
chr7:128431899-128432108	chr7	+	128432037	128432103	True	NM_001201372,NM_001708,NM_022742	chr7,chr7,chr7	+,-,+	CCDC136,OPN1SW,CCDC136	-624,-16193,-38
chr11:63754424-63754823	chr11	+	63754548	63754818	True	NM_017670,NR_003089,NM_173587	chr11,chr11,chr11	+,+,-	OTUB1,OTUB1,RCOR2	-1274,-1274,-70232
chr17:42264055-42264347	chr17	+	42264248	42264386	True	NM_178542,NM_001076674,NM_024107,NM_177441	chr17,chr17,chr17,chr17	-,+,+,+	C17orf65,TMUB2,TMUB2,TMUB2	-166,-33,-33,187
chr3:39188180-39188952	chr3	+	39188264	39188946	True	NM_033027,NM_145755	chr3,chr3	-,+	CSRNP1,TTC21A	6206,-39163
chr5:34043798-34044062	chr5	+	34043802	34044016	True	NM_030945,NM_016568,NM_181435	chr5,chr5,chr5	-,+,-	C1QTNF3,RXFP3,C1QTNF3	-431,-107362,-431
chr6:14926887-14927229	chr6	+	14926988	14927184	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	319342,736167
chr14:50066001-50066379	chr14	+	50066094	50066272	True	NM_203467,NR_037792,NR_037793,NM_001030001,NM_152329	chr14,chr14,chr14,chr14,chr14	+,+,+,-,+	LRR1,LRR1,LRR1,RPS29,LRR1	-732,-732,-732,-13000,-732
chr13:41551265-41552235	chr13	+	41551360	41552042	True	NM_007187,NM_001145353	chr13,chr13	+,-	WBP4,ELF1	83654,4433
chr19:39927385-39927696	chr19	+	39927419	39927511	True	NM_001111020,NM_003169,NM_001130825,NM_001130824,NM_001020	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	SUPT5H,SUPT5H,SUPT5H,SUPT5H,RPS16	8674,8776,8674,8674,-801
chr7:102563989-102564539	chr7	+	102564290	102564416	True	NM_145032,NM_005824	chr7,chr7	-,+	FBXL13,LRRC17	150651,-11004
chr1:18429842-18431030	chr1	+	18429958	18431076	True	NM_032880,NM_018715	chr1,chr1	+,-	IGSF21,RCC2	3163,-663738
chr9:132962703-132963012	chr9	+	132962866	132962926	True	NM_001128826,NM_015033	chr9,chr9	+,-	NCS1,FNBP1	-45,-157393
chr4:75032965-75034506	chr4	+	75033035	75034217	True	NM_002089,NM_001144978	chr4,chr4	-,+	CXCL2,MTHFD2L	-68038,-9257
chr1:93937170-93938089	chr1	+	93937306	93938004	True	NR_034089,NM_017737	chr1,chr1	-,+	LOC100131564,FNBP1L	-125938,-23677
chr19:50316771-50318436	chr19	+	50316775	50318206	True	NM_025129,NR_033269,NM_001171937,NM_030973	chr19,chr19,chr19,chr19	-,-,-,+	FUZ,FUZ,FUZ,MED25	-208,-208,-208,3329
chr18:59562118-59562369	chr18	+	59562305	59562369	True	NM_020854,NM_173557	chr18,chr18	+,-	KIAA1468,RNF152	292154,-2001
chr13:33775017-33775516	chr13	+	33775235	33775574	True	NM_004795,NM_052851	chr13,chr13	+,-	KL,STARD13	-184727,4674
chr1:155879658-155881089	chr1	+	155879776	155881129	True	NR_002974,NM_006912,NM_181885	chr1,chr1,chr1	-,-,+	SNORA42,RIT1,RXFP4	8754,98,30350
chr6:62991379-62993365	chr6	+	62991707	62993284	True	NM_001190706,NM_152688	chr6,chr6	+,-	MTRNR2L9,KHDRBS2	-707757,2866
chr11:69592662-69593029	chr11	+	69592749	69592821	True	NM_002007,NM_053056	chr11,chr11	-,+	FGF4,CCND1	-2578,-136932
chr6:10420306-10420748	chr6	+	10420317	10420714	True	NM_001032280,NM_003220,NM_001042425,NR_033910	chr6,chr6,chr6,chr6	-,-,-,+	TFAP2A,TFAP2A,TFAP2A,LOC100130275	-7710,-4847,-520,-7824
chr3:160169227-160169654	chr3	+	160169287	160169597	True	NR_029525,NM_173084	chr3,chr3	+,-	MIR16-2,TRIM59	-46805,-1661
chr2:68545547-68546230	chr2	+	68545585	68546161	True	NM_015463,NM_002664,NM_001111101	chr2,chr2,chr2	-,+,-	CNRIP1,PLEK,CNRIP1	1072,46160,1072
chr1:115323798-115325383	chr1	+	115324408	115325418	True	NM_003176,NM_025073,NM_001102396	chr1,chr1,chr1	+,-,-	SYCP1,SIKE1,SIKE1	72036,-1100,-1100
chr1:6484553-6484811	chr1	+	6484558	6484650	True	NM_019089,NR_036218,NM_031475	chr1,chr1,chr1	-,-,+	HES2,MIR4252,ESPN	-4579,5356,197
chr4:8454059-8454723	chr4	+	8454091	8454768	True	NM_152544,NM_003501	chr4,chr4	+,-	METTL19,ACOX3	-11610,-11639
chr5:111082464-111084037	chr5	+	111082537	111084076	True	NM_001142480,NM_001142478,NR_015370,NM_004772,NM_001142482,NM_001142483,NM_001142479,NM_001142481,NM_001142477,NM_001142476	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,-,+,-,-,-,-,-,-,-	C5orf13,C5orf13,NCRNA00219,C5orf13,C5orf13,C5orf13,C5orf13,C5orf13,C5orf13,C5orf13	9227,9374,412146,8920,9079,7923,9227,9081,9768,9890
chr19:40591508-40592768	chr19	+	40592037	40592589	True	NM_001142577,NM_001010880,NM_178544,NM_001142578,NM_001142579	chr19,chr19,chr19,chr19,chr19	-,-,+,-,-	ZNF780A,ZNF780A,ZNF546,ZNF780A,ZNF780A	4314,4279,-89149,4314,4314
chrX:41307902-41308557	chrX	+	41308250	41308595	True	NM_022567,NM_001126054	chrX,chrX	+,-	NYX,CASK	-1597,473742
chr22:37169415-37170571	chr22	+	37169735	37170481	True	NM_001177701,NR_033531,NM_006860,NM_000631,NM_001177702	chr22,chr22,chr22,chr22,chr22	-,-,-,+,-	IFT27,IFT27,IFT27,NCF4,IFT27	1741,1741,1741,86548,-5661
chr12:6875034-6875517	chr12	+	6875068	6875260	True	NM_002286,NR_026581,NM_002824	chr12,chr12,chr12	+,-,+	LAG3,MLF2,PTMS	6409,-12432,280
chr8:132052820-132053067	chr8	+	132052830	132053112	True	NM_015137,NM_001115	chr8,chr8	+,-	EFR3A,ADCY8	863243,5
chr10:129845105-129845321	chr10	+	129845109	129845321	True	NM_130435,NM_001145966	chr10,chr10	+,-	PTPRE,MKI67	491,79197
chr16:29479579-29479809	chr16	+	29479623	29479715	True	NR_002556,NR_002557,NM_001017390,NM_177552	chr16,chr16,chr16,chr16	-,-,+,+	LOC388242,LOC613038,SULT1A4,SULT1A3	-724,-724,-8474,-8474
chr16:29479579-29479809	chr16	+	30218969	30219061	False	NR_002556,NR_002557,NM_001017390,NM_177552	chr16,chr16,chr16,chr16	-,-,+,+	LOC388242,LOC613038,SULT1A4,SULT1A3	-721,-721,-8478,-8478
chr9:130539929-130540223	chr9	+	130539937	130540145	True	NR_036055,NM_001261,NM_170600,NM_005489	chr9,chr9,chr9,chr9	+,+,-,-	MIR2861,CDK9,SH2D3C,SH2D3C	8051,8159,953,-6316
chr6:109102868-109103642	chr6	+	109103108	109103674	True	NR_033376,NM_001199934	chr6,chr6	+,-	NCRNA00222,SESN1	-30302,226567
chr2:102626039-102626361	chr2	+	102626148	102626415	True	NM_173343,NM_001145664	chr2,chr2	+,-	IL1R2,RFX8	-10740,-534983
chr9:117349619-117350222	chr9	+	117349656	117350208	True	NM_015404,NM_004888	chr9,chr9	-,+	DFNB31,ATP6V1G1	-81920,-7
chr17:39943421-39944456	chr17	+	39943425	39944090	True	NM_002230,NM_021991,NM_021939	chr17,chr17,chr17	-,-,+	JUP,JUP,FKBP10	-461,-461,24871
chr1:231666607-231667707	chr1	+	231666652	231667591	True	NR_028393,NR_028394,NR_028395,NR_028396,NR_028397,NR_028398,NR_028399,NR_033826,NM_005999,NR_028400	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,+,+,-,+,+	TSNAX-DISC1,TSNAX-DISC1,TSNAX-DISC1,TSNAX-DISC1,TSNAX-DISC1,TSNAX-DISC1,TSNAX-DISC1,SNRPD2P2,TSNAX,TSNAX-DISC1	-2304,-2304,-2304,-2304,-2304,-2304,-2304,-54381,-2304,-2304
chr1:161719661-161719875	chr1	+	161719726	161719912	True	NM_007240,NR_002595	chr1,chr1	+,-	DUSP12,RPL31P11	-196,-64684
chr5:176449508-176449717	chr5	+	176449521	176449729	True	NM_012279,NM_001199298	chr5,chr5	+,-	ZNF346,UIMC1	-1,-15726
chr8:22858823-22859847	chr8	+	22858877	22859678	True	NM_003842,NM_015178,NM_001160037	chr8,chr8,chr8	-,+,+	TNFRSF10B,RHOBTB2,RHOBTB2	67073,-1837,-5568
chr5:56472498-56473391	chr5	+	56472497	56472924	True	NM_001203246,NM_001127235,NM_022913,NM_152622	chr5,chr5,chr5,chr5	+,+,+,-	GPBP1,GPBP1,GPBP1,MIER3	-2781,-1281,-2781,-224543
chr6:70415232-70416016	chr6	+	70415671	70416017	True	NM_018368,NM_001858	chr6,chr6	-,+	LMBRD1,COL19A1	91082,160430
chr1:219662557-219663177	chr1	+	219662731	219663177	True	NM_138794,NM_018713	chr1,chr1	+,-	LYPLAL1,SLC30A10	-315598,438866
chr11:128853375-128853988	chr11	+	128853616	128853993	True	NM_014715,NM_000890,NM_022112	chr11,chr11,chr11	-,+,-	ARHGAP32,KCNJ5,TP53AIP1	40148,-92362,-40322
chr1:156676963-156678865	chr1	+	156677629	156678717	True	NM_001199723,NM_001878,NM_001142560	chr1,chr1,chr1	-,-,+	CRABP2,CRABP2,RRNAD1	-2021,-2170,19545
chr22:25777346-25778831	chr22	+	25777362	25778737	True	NM_001135772,NR_029395	chr22,chr22	-,+	LRP5L,IGLL3P	-98,-63189
chr12:123319331-123319656	chr12	+	123319461	123319567	True	NM_003959,NM_024667	chr12,chr12	+,-	HIP1R,VPS37B	471,61195
chr12:57151259-57153122	chr12	+	57151444	57153113	True	NM_000946,NM_003725	chr12,chr12	-,+	PRIM1,HSD17B6	-5298,3994
chr16:20359382-20359748	chr16	+	20359382	20359634	True	NM_001008389,NM_017888,NM_003361	chr16,chr16,chr16	-,+,-	UMOD,ACSM5,UMOD	4453,61221,4453
chr19:11308703-11308985	chr19	+	11308786	11308913	True	NM_015493,NM_018687,NM_001136191	chr19,chr19,chr19	-,+,-	KANK2,LOC55908,KANK2	-3520,41381,-543
chr6:15978169-15979268	chr6	+	15978508	15979311	True	NM_013262,NR_036448	chr6,chr6	+,-	MYLIP,DTNBP1	150005,-315219
chr14:93212250-93213101	chr14	+	93212477	93213006	True	NM_005606,NM_005113,NM_001008530	chr14,chr14,chr14	-,+,-	LGMN,GOLGA5,LGMN	2092,47643,2092
chr9:125703695-125704675	chr9	+	125703850	125704628	True	NM_012197,NM_020924	chr9,chr9	+,-	RABGAP1,ZBTB26	-613,-10071
chr1:33647755-33648157	chr1	+	33647878	33648206	True	NM_152493,NM_018207	chr1,chr1	+,-	ZNF362,TRIM62	73967,-207
chr14:36987837-36988072	chr14	+	36987905	36987983	True	NM_003317,NM_006194,NM_001101341,NM_001079668	chr14,chr14,chr14,chr14	-,+,-,-	NKX2-1,PAX9,SFTA3,NKX2-1	970,138789,-4915,1497
chr19:49999049-49999282	chr19	+	49999171	49999331	True	NR_001285,NR_026712,NR_000020,NR_000021,NM_012423,NR_000019,NR_000018,NM_001015,NR_029703	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,+,+,+,-	SNORD35B,RPL13AP5,SNORD33,SNORD32A,RPL13A,SNORD34,SNORD35A,RPS11,MIR150	1644,-8357,-5348,-5999,-8357,-5058,-4790,302,4844
chr12:57941307-57943039	chr12	+	57941386	57943039	True	NM_004984,NM_006400	chr12,chr12	+,-	KIF5A,DCTN2	807,-408
chrX:101967953-101968885	chrX	+	101968025	101968902	True	NM_030639,NM_001184875,NM_001184874,NM_001184876,NM_001004051,NM_138437,NM_001142528,NM_021992,NM_001142525,NM_001142524,NM_001142527,NM_001142526	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,+,+,-,+,+,+,+	BHLHB9,GPRASP2,GPRASP2,GPRASP2,GPRASP2,GPRASP2,BHLHB9,TMSB15A,BHLHB9,BHLHB9,BHLHB9,BHLHB9	6739,-972,-972,-972,-972,-972,6739,-196326,6739,6739,6739,6739
chr11:124844029-124845020	chr11	+	124844279	124845052	True	NM_152722,NM_025004	chr11,chr11	-,+	HEPACAM,CCDC15	-37971,-20323
chr1:120144831-120146189	chr1	+	120144904	120146204	True	NR_033781,NR_036540	chr1,chr1	+,-	HSD3BP4,LOC644242	-38463,-2990
chr19:54106464-54106683	chr19	+	54106464	54106712	True	NM_001012728,NR_002938	chr19,chr19	+,-	DPRX,LOC284379	28597,89
chr9:116615455-116617164	chr9	+	116615591	116616965	True	NM_133374,NM_001633	chr9,chr9	+,-	ZNF618,AMBP	21596,223837
chr1:11359748-11360146	chr1	+	11359747	11359809	True	NM_004958,NM_013319	chr1,chr1	-,+	MTOR,UBIAD1	-37139,-26543
chr17:63135672-63136915	chr17	+	63135875	63136682	True	NM_006572,NM_003835,NM_001165933,NM_001081955	chr17,chr17,chr17,chr17	-,+,+,+	GNA13,RGS9,RGS9,RGS9	-82955,-2470,-2470,-2470
chr16:3333197-3333446	chr16	+	3333203	3333475	True	NM_005741,NM_033208	chr16,chr16	+,-	ZNF263,TIGD7	11,22014
chr1:15763027-15763428	chr1	+	15763227	15763473	True	NM_001229,NM_007272	chr1,chr1	-,+	CASP9,CTRC	87517,1464
chr9:117853207-117853908	chr9	+	117853369	117853941	True	NM_017418,NM_002160	chr9,chr9	+,-	DEC1,TNC	50155,26595
chrX:69399279-69399548	chrX	+	69399325	69399415	True	NM_002565,NM_198512	chrX,chrX	-,+	P2RY4,DGAT2L6	80289,-2040
chr8:52810909-52811174	chr8	+	52810918	52811174	True	NM_052937,NM_005285	chr8,chr8	-,+	PCMTD1,NPBWR1	611,1041293
chr11:66626812-66627076	chr11	+	66626825	66627005	True	NM_024036,NM_022172	chr11,chr11	+,-	LRFN4,PC	-2000,48385
chr21:22409439-22410776	chr21	+	22409865	22410445	True	NM_004540,NR_024090	chr21,chr21	+,-	NCAM2,C21orf131	-39295,-234439
chr4:1715172-1715545	chr4	+	1715171	1715338	True	NM_006527,NM_138385,NM_006342,NM_001127266	chr4,chr4,chr4,chr4	-,-,+,-	SLBP,TMEM129,TACC3,TMEM129	-1141,7797,7927,7797
chr15:78367631-78369592	chr15	+	78367915	78369272	True	NM_015079,NM_001101404,NM_144572	chr15,chr15,chr15	-,+,-	TBC1D2B,SH2D7,TBC1D2B	772,15654,772
chr19:45029330-45029634	chr19	+	45029369	45029447	True	NM_001102598,NM_001102599,NM_001205280,NM_001102600,NM_001102597	chr19,chr19,chr19,chr19,chr19	-,-,+,-,-	CEACAM20,CEACAM20,LOC147710,CEACAM20,CEACAM20	4151,4151,87492,4151,4151
chr17:73893511-73894288	chr17	+	73893647	73894217	True	NM_173547,NM_001113324,NM_032478	chr17,chr17,chr17	-,+,-	TRIM65,C17orf106,MRPL38	-593,81080,7014
chr12:102566177-102568063	chr12	+	102566285	102568120	True	NM_017915,NM_002674	chr12,chr12	+,-	C12orf48,PMCH	-52393,23557
chr4:99199272-99200093	chr4	+	99199384	99199990	True	NM_021159,NM_174952	chr4,chr4	+,-	RAP1GDS1,C4orf37	-16909,-134993
chr7:133978838-133979815	chr7	+	133978845	133979795	True	NM_144648,NM_032826	chr7,chr7	+,-	LRGUK,SLC35B4	-166791,22082
chrX:70983531-70983742	chrX	+	70983549	70983699	True	NR_001568,NM_001145140,NM_001145139	chrX,chrX,chrX	-,+,+	BCYRN1,CXorf49,CXorf49B	-34587,-460,-460
chrX:70983531-70983742	chrX	-	70937575	70937725	False	NR_034005,NM_001145140,NM_001145139	chrX,chrX,chrX	+,-,-	FLJ46446,CXorf49,CXorf49B	-20580,460,460
chr2:11296786-11297674	chr2	+	11296829	11297471	True	NM_152391,NM_004850	chr2,chr2	+,-	PQLC3,ROCK2	-1340,187290
chr22:17292821-17293894	chr22	+	17293026	17293855	True	NR_003607,NM_175878	chr22,chr22	+,-	HSFY1P1,XKR3	14508,8788
chr12:1727092-1728645	chr12	+	1727383	1728543	True	NM_032642,NM_030775,NM_152441	chr12,chr12,chr12	+,+,-	WNT5B,WNT5B,FBXL14	9868,-1220,-24052
chr2:239196853-239197131	chr2	+	239196914	239197098	True	NM_001139490,NM_022817	chr2,chr2	+,-	TRAF3IP1,PER2	32086,159
chr10:20106465-20106675	chr10	+	20106464	20106656	True	NM_006393,NM_032812	chr10,chr10	-,+	NEBL,PLXDC2	1079925,-1143
chr19:19319279-19319520	chr19	+	19319392	19319546	True	NM_176880,NM_004386	chr19,chr19	-,+	NR2C2AP,NCAN	-5154,3235
chr13:39611075-39611687	chr13	+	39611102	39611724	True	NM_001012754,NM_025138,NM_170719,NM_001017370	chr13,chr13,chr13,chr13	+,-,-,+	NHLRC3,C13orf23,C13orf23,NHLRC3	730,578,578,730
chr14:51139279-51139735	chr14	+	51139447	51139611	True	NM_021818,NM_181598	chr14,chr14	-,+	SAV1,ATL1	-4424,-112755
chr16:67018421-67019764	chr16	+	67018667	67019533	True	NM_173815,NR_024525	chr16,chr16	+,-	CES4A,FAM96B	2958,-50347
chr3:194093126-194093615	chr3	+	194093358	194093632	True	NM_130830,NM_001135057,NR_033929	chr3,chr3,chr3	-,-,+	LRRC15,LRRC15,FLJ34208	-2886,-2886,114236
chr4:188918226-188918674	chr4	+	188918320	188918380	True	NM_173553,NM_174900	chr4,chr4	-,+	TRIML2,ZFP42	108078,-1446
chr12:48499904-48500165	chr12	+	48499999	48500123	True	NM_001166686,NM_014554	chr12,chr12	+,-	PFKM,SENP1	-394,-358
chr3:45927587-45929071	chr3	+	45927615	45929049	True	NM_020347,NM_006641,NM_031200,NR_036525	chr3,chr3,chr3,chr3	-,+,+,+	LZTFL1,CCR9,CCR9,CCR9	-43994,56,56,56
chr11:57275594-57276377	chr11	+	57275780	57276094	True	NM_003627,NM_001198810,NM_001105565	chr11,chr11,chr11	-,-,+	SLC43A1,SLC43A1,SMTNL1	7148,6314,34019
chr1:13609732-13609946	chr1	+	13609738	13609898	True	NM_001012277,NM_001012276,NM_001098376	chr1,chr1,chr1	-,-,+	PRAMEF7,PRAMEF8,PRAMEF15	639,1702,32074
chr1:13609732-13609946	chr1	-	12978101	12978261	False	NM_001012277,NM_001012276,NM_001039361	chr1,chr1,chr1	+,+,-	PRAMEF7,PRAMEF8,PRAMEF10	-639,-1702,-20007
chr1:13609732-13609946	chr1	+	13388953	13389113	False	NM_001012276,NM_001010889	chr1,chr1	-,+	PRAMEF8,PRAMEF6	1702,-29171
chr6:53658403-53658681	chr6	+	53658409	53658675	True	NM_018214,NM_001003760	chr6,chr6	+,-	LRRC1,KLHL31	1102,-127903
chr18:33875823-33876027	chr18	+	33875832	33876000	True	NM_001099406,NM_025135	chr18,chr18	-,+	SLC39A6,FHOD3	-166475,1701
chr19:54340307-54341128	chr19	+	54340807	54340867	True	NM_001020820,NM_144687	chr19,chr19	+,-	MYADM,NLRP12	28743,-13159
chr19:40919792-40920612	chr19	+	40919814	40920503	True	NM_181882,NM_020971,NM_020956	chr19,chr19,chr19	-,+,-	PRX,SPTBN4,PRX	-543,52622,-543
chr6:123885108-123886399	chr6	+	123885285	123886437	True	NM_001040214,NM_006073	chr6,chr6	+,-	NKAIN2,TRDN	238631,71555
chr5:173146980-173147504	chr5	+	173147032	173147497	True	NR_027109,NM_138369	chr5,chr5	+,-	LOC285593,BOD1	-140427,-103366
chrX:109245334-109245620	chrX	+	109245399	109245591	True	NM_032227,NM_017698,NR_004379	chrX,chrX,chrX	+,+,-	TMEM164,TMEM164,SNORD96B	750,271,222747
chr6:160209472-160209940	chr6	+	160209626	160209935	True	NR_002965,NR_002960,NM_014161,NM_030752,NM_001008897	chr6,chr6,chr6,chr6,chr6	-,-,+,-,-	SNORA29,SNORA20,MRPL18,TCP1,TCP1	-2861,-8213,1556,850,850
chr7:142834712-142836082	chr7	+	142835098	142836044	True	NR_002140,NM_002652	chr7,chr7	-,+	OR6W1P,PIP	-74216,-5975
chr10:88715493-88715782	chr10	+	88715497	88715831	True	NM_003087,NM_024756	chr10,chr10	+,-	SNCG,MMRN2	2456,1644
chr14:105069757-105070157	chr14	+	105069760	105070176	True	NM_207379,NM_001008404	chr14,chr14	-,+	TMEM179,C14orf180	971,-23755
chr3:48720409-48721260	chr3	+	48720526	48721276	True	NM_016453,NM_033629,NM_184231	chr3,chr3,chr3	-,+,-	NCKIPSD,TREX1,NCKIPSD	2108,-213348,2108
chr16:75590749-75591651	chr16	+	75590986	75591451	True	NM_001077418,NM_001077419,NM_001077416,NM_007285	chr16,chr16,chr16,chr16	-,-,-,+	TMEM231,TMEM231,TMEM231,GABARAPL2	-816,-816,-850,8797
chr18:21239997-21241389	chr18	+	21240166	21241282	True	NM_001127717,NM_173505	chr18,chr18	+,-	LAMA3,ANKRD29	28279,1617
chr2:232791919-232793363	chr2	+	232792082	232793202	True	NM_024409,NM_152383	chr2,chr2	-,+	NPPC,DIS3L2	-1123,33090
chr8:62223792-62224100	chr8	+	62223878	62224031	True	NR_034003,NM_173519	chr8,chr8	-,+	LOC100130298,CLVS1	-343571,-23408
chr2:145280532-145281912	chr2	+	145280664	145281648	True	NR_033258,NM_001171653,NR_033870,NM_014795	chr2,chr2,chr2,chr2	-,-,+,-	ZEB2,ZEB2,DKFZp686O1327,ZEB2	-2706,-2706,143885,-2706
chr8:95731365-95731691	chr8	+	95731579	95731643	True	NM_181787,NR_034034	chr8,chr8	+,-	DPY19L4,LOC100288748	459,-79884
chr1:207227540-207229367	chr1	+	207227542	207229348	True	NM_001018053,NM_018566,NM_006212	chr1,chr1,chr1	+,-,+	PFKFB2,YOD1,PFKFB2	-974,-3120,-974
chrX:63424323-63424711	chrX	+	63424333	63424707	True	NM_152424,NM_001010888	chrX,chrX	-,+	FAM123B,ZC3H12B	967,1283907
chr4:52733987-52734690	chr4	+	52734245	52734716	True	NM_001024611,NM_015115	chr4,chr4	-,+	LRRC66,DCUN1D4	149129,-25020
chr9:100820271-100821598	chr9	+	100820497	100821646	True	NM_018946,NM_014788	chr9,chr9	+,-	NANS,TRIM14	-1594,59884
chr7:12721037-12722046	chr7	+	12721044	12722076	True	NM_001195396,NM_001037164,NM_001135924,NM_212460,NM_005738	chr7,chr7,chr7,chr7,chr7	+,+,-,+,+	ARL4A,ARL4A,VWDE,ARL4A,ARL4A	4834,4375,-277192,4375,4834
chr1:220265342-220266431	chr1	+	220265474	220266444	True	NM_006085,NM_018060	chr1,chr1	-,+	BPNT1,IARS2	-2283,1010
chr19:5825376-5825587	chr19	+	5825389	5825585	True	NM_004558,NM_000150	chr19,chr19	+,-	NRTN,FUT6	-1622,14207
chr1:41926593-41928445	chr1	+	41927072	41928338	True	NM_001956,NR_037868	chr1,chr1	-,+	EDN2,LOC100507178	22057,-446868
chr1:109791535-109791739	chr1	+	109791555	109791773	True	NM_001408,NM_001005290	chr1,chr1	+,-	CELSR2,PSRC1	867,34067
chr17:1645372-1646420	chr17	+	1645386	1646366	True	NM_001165921,NM_001165920,NM_000934,NR_028505	chr17,chr17,chr17,chr17	+,+,+,-	SERPINF2,SERPINF2,SERPINF2,C17orf91	78,-47,78,-25820
chr3:4358523-4360311	chr3	+	4358628	4360248	True	NR_024022,NM_001164674	chr3,chr3	+,-	SETMAR,SUMF1	-13382,148780
chr11:7110369-7110609	chr11	+	7110412	7110594	True	NM_013249,NM_014469	chr11,chr11	-,+	ZNF214,RBMXL2	-68826,-298
chr4:103734372-103736359	chr4	+	103734465	103735893	True	NM_001008388,NM_181892	chr4,chr4	+,-	CISD2,UBE2D3	54241,12497
chr5:141392062-141392466	chr5	+	141392103	141392374	True	NM_005471,NM_183401	chr5,chr5	-,+	GNPDA1,RNF14	296,-43442
chr4:8200132-8200492	chr4	+	8200148	8200540	True	NM_001130088,NM_018986	chr4,chr4	-,+	ABLIM2,SH3TC1	-39589,519
chr7:23340385-23340970	chr7	+	23340390	23340847	True	NM_138446,NM_006547	chr7,chr7	+,-	C7orf30,IGF2BP3	-1501,169211
chr5:35992254-35993877	chr5	+	35992259	35993909	True	NM_002185,NM_001171873,NM_152404	chr5,chr5,chr5	+,-,-	IL7R,UGT3A1,UGT3A1	-135329,7271,-724
chr11:69591787-69592052	chr11	+	69591797	69592045	True	NM_002007,NM_053056	chr11,chr11	-,+	FGF4,CCND1	-1626,-135975
chr6:14117421-14117628	chr6	+	14117436	14117650	True	NM_001031713,NM_001040280,NM_004233	chr6,chr6,chr6	-,+,+	CCDC90A,CD83,CD83	-302647,214,214
chr10:25462116-25463464	chr10	+	25462245	25463415	True	NM_020752,NR_027333	chr10,chr10	+,-	GPR158,LOC100128811	874,1840
chr10:99446494-99446733	chr10	+	99446505	99446731	True	NM_021732,NM_031484	chr10,chr10	-,+	AVPI1,MARVELD1	334,26733
chr19:3584759-3585099	chr19	+	3584934	3585004	True	NM_001060,NM_133261	chr19,chr19	-,+	TBXA2R,GIPC3	21877,564
chr10:76874019-76875553	chr10	+	76874119	76875429	True	NM_001007271,NM_001007272,NM_144660,NM_001007273,NM_001174156	chr10,chr10,chr10,chr10,chr10	-,-,+,-,+	DUSP13,DUSP13,SAMD8,DUSP13,SAMD8	-5149,-5149,-2777,-5149,-2777
chr22:17469733-17470732	chr22	+	17469777	17470507	True	NR_015352,NM_001037814	chr22,chr22	+,-	CECR7,GAB4	46952,18655
chr3:9958045-9958314	chr3	+	9958064	9958322	True	NR_037807,NM_032732,NM_207351,NM_153460,NM_153461,NM_001203263,NM_001203264,NM_001203265	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,-,+,+,+,+,+	IL17RC,IL17RC,PRRT3,IL17RC,IL17RC,IL17RC,IL17RC,IL17RC	435,435,35806,435,459,435,435,435
chr19:11688161-11688431	chr19	+	11688252	11688376	True	NM_001611,NM_145295,NM_001111036,NM_001111035,NM_001111034	chr19,chr19,chr19,chr19,chr19	-,+,-,-,-	ACP5,ZNF627,ACP5,ACP5,ACP5	227,19858,1475,1475,1266
chr1:55445835-55446072	chr1	+	55445926	55446102	True	NM_014762,NM_182532	chr1,chr1	-,+	DHCR24,TMEM61	-93005,362
chr19:59020607-59022289	chr19	+	59020973	59022027	True	NM_012254,NM_017908,NM_032792,NM_005762	chr19,chr19,chr19,chr19	-,+,-,+	SLC27A5,ZNF446,ZBTB45,TRIM28	1455,-33229,8944,33808
chr17:34259533-34260247	chr17	+	34259539	34260161	True	NM_001163124,NM_001163125,NM_001034836,NM_001163120,NM_001163121,NM_001163122,NM_001163130,NM_020426,NM_145654,NM_003487,NR_027999,NR_027998,NR_027997,NR_027996,NR_028000	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,-,-,-,-,+,-,-,-,-,-	RDM1,RDM1,RDM1,RDM1,RDM1,RDM1,RDM1,LYZL6,RDM1,TAF15,RDM1,RDM1,RDM1,RDM1,RDM1	-2236,-2236,-1759,-1759,-1759,-2236,-2236,6457,-1759,-123116,-2236,-1759,-1759,-1759,-2236
chr15:71095213-71096428	chr15	+	71095290	71096449	True	NM_018003,NM_001199017	chr15,chr15	-,+	UACA,LRRC49	-39440,88478
chr13:114896204-114896681	chr13	+	114896464	114896724	True	NM_001078645	chr13	+	CDC16	103637
chr18:56350771-56351253	chr18	+	56350771	56351048	True	NM_052947,NM_173844	chr18,chr18	-,+	ALPK2,MALT1	-54582,-12211
chr5:77657555-77658758	chr5	+	77657605	77658472	True	NM_003664,NM_004866	chr5,chr5	-,+	AP3B1,SCAMP1	-67077,-1325
chr20:20694013-20694716	chr20	+	20694095	20694729	True	NM_020343,NM_002196	chr20,chr20	-,+	RALGAPA2,INSM1	-829,-345381
chr16:57323359-57323991	chr16	+	57323368	57323824	True	NM_015993,NM_012106	chr16,chr16	-,+	PLLP,ARL2BP	-4784,-44381
chr4:72205021-72205795	chr4	+	72205025	72205655	True	NM_000583,NM_003759	chr4,chr4	-,+	GC,SLC4A4	444476,-306
chr10:35987183-35988671	chr10	+	35987393	35988618	True	NM_153368,NM_031866	chr10,chr10	+,-	GJD4,FZD8	-93112,-57031
chr11:18194512-18195420	chr11	+	18194544	18195360	True	NR_026576,NM_054032	chr11,chr11	-,+	SAA3P,MRGPRX4	-56865,-211
chr15:49443451-49444757	chr15	+	49443707	49444285	True	NM_001001556,NM_001143887,NM_004236,NR_036507	chr15,chr15,chr15,chr15	+,-,-,+	GALK2,COPS2,COPS2,LOC100306975	3690,3630,3630,4209
chr12:112748920-112750853	chr12	+	112749633	112750879	True	NM_002834,NM_001109662	chr12,chr12	+,-	PTPN11,C12orf51	105656,69067
chr11:67805350-67805631	chr11	+	67805355	67805487	True	NM_030930,NM_006019,NM_002496,NM_006053	chr11,chr11,chr11,chr11	-,+,+,+	UNC93B1,TCIRG1,NDUFS8,TCIRG1	-33762,974,-7322,4959
chr19:50382582-50383408	chr19	+	50382583	50382985	True	NM_001168222,NM_024682,NM_032375,NM_001098633,NM_001098632	chr19,chr19,chr19,chr19,chr19	+,+,-,-,-	TBC1D17,TBC1D17,AKT1S1,AKT1S1,AKT1S1	-1952,-1952,-2005,-1971,-1939
chr2:99264885-99265281	chr2	+	99265088	99265280	True	NM_001160154,NM_014044	chr2,chr2	-,+	MGAT4A,UNC50	14706,-40097
chr6:143891973-143892762	chr6	+	143891991	143892467	True	NM_001100166,NR_027114,NR_027113	chr6,chr6,chr6	+,-,-	PHACTR2,LOC285740,LOC285740	36849,-8806,-1515
chr22:30444585-30445696	chr22	+	30444614	30445249	True	NM_152510,NM_002309	chr22,chr22	+,-	HORMAD2,LIF	31203,197606
chr14:74111357-74111559	chr14	+	74111358	74111516	True	NM_031427,NM_001201366,NM_006029	chr14,chr14,chr14	+,+,-	DNAL1,DNAL1,PNMA1	61,61,69662
chr6:41122279-41123084	chr6	+	41122341	41123078	True	NM_018965,NR_026938,NM_178174	chr6,chr6,chr6	-,+,-	TREM2,LOC221442,TREML1	7894,-53620,-271
chr3:37038189-37038589	chr3	+	37038198	37038628	True	NM_001167617,NM_014805,NM_000249,NM_001167618,NM_001167619	chr3,chr3,chr3,chr3,chr3	+,-,+,+,+	MLH1,EPM2AIP1,MLH1,MLH1,MLH1	-2981,-3403,-3408,-2981,-2981
chr6:127438480-127438888	chr6	+	127438612	127438832	True	NM_032784,NM_001139510	chr6,chr6	+,-	RSPO3,ECHDC1	1215,224770
chr2:60781891-60782118	chr2	+	60781923	60782013	True	NM_022894,NM_022893,NM_138559,NM_018014	chr2,chr2,chr2,chr2	+,-,-,-	PAPOLG,BCL11A,BCL11A,BCL11A	201351,-1290,-1290,-1290
chr9:88990582-88991958	chr9	+	88990617	88991124	True	NM_024617,NM_024635	chr9,chr9	-,+	ZCCHC6,NAA35	-21215,-434611
chr9:138437329-138437745	chr9	+	138437365	138437793	True	NM_014582,NM_144654	chr9,chr9	+,-	OBP2A,C9orf116	191,-45604
chr18:57363817-57364046	chr18	+	57363856	57363986	True	NM_133459,NM_021127	chr18,chr18	-,+	CCBE1,PMAIP1	708,203205
chr21:45231490-45231915	chr21	+	45231512	45231930	True	NR_026961,NM_003683	chr21,chr21	-,+	LOC284837,RRP1	568,-22145
chr2:39101037-39101507	chr2	+	39101037	39101211	True	NM_001145450,NM_198963	chr2,chr2	+,-	MORN2,DHX57	1891,1860
chr17:33446877-33447601	chr17	+	33447066	33447258	True	NM_002878,NR_037711,NR_037712,NR_037714,NM_133629,NM_017559,NM_001142571	chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,+,-	RAD51L3,RAD51L3,RAD51L3,RAD51L3-RFFL,RAD51L3,FNDC8,RAD51L3	-178,-178,-178,1347,-178,1372,-178
chr5:56594538-56595887	chr5	+	56594542	56595818	True	NM_001127236,NM_001017992	chr5,chr5	+,-	GPBP1,ACTBL2	-84692,182868
chr4:95370085-95371384	chr4	+	95370084	95370834	True	NM_001011513,NM_001011516,NM_001011515,NM_014485,NM_006457,NR_024179	chr4,chr4,chr4,chr4,chr4,chr4	+,+,+,-,+,+	PDLIM5,PDLIM5,PDLIM5,HPGDS,PDLIM5,PDLIM5	2203,2203,2203,-106057,2203,2203
chr2:36830028-36830989	chr2	+	36830644	36830822	True	NM_001177972,NM_005102,NM_001042548	chr2,chr2,chr2	+,-,-	VIT,FEZ2,FEZ2	93010,-5312,-5312
chr1:53905460-53905666	chr1	+	53905485	53905593	True	NM_033067,NR_002314	chr1,chr1	+,-	DMRTB1,FLJ40434	19478,150
chr12:108080665-108081528	chr12	+	108080791	108081257	True	NM_012406,NM_007062	chr12,chr12	-,+	PRDM4,PWP1	73717,-1254
chr13:102572259-102572530	chr13	+	102572285	102572547	True	NM_004115,NM_004791	chr13,chr13	-,+	FGF14,ITGBL1	-3290,-467370
chr1:55445390-55445805	chr1	+	55445468	55445774	True	NM_014762,NM_182532	chr1,chr1	-,+	DHCR24,TMEM61	-92547,690
chr11:116648298-116650171	chr11	+	116648457	116650154	True	NM_001159736,NM_003904,NM_032725,NM_000040	chr11,chr11,chr11,chr11	-,-,-,+	BUD13,ZNF259,BUD13,APOC3	-4743,8642,-4743,50469
chr4:132311908-132313145	chr4	+	132312053	132312908	True	NM_144643,NM_020815	chr4,chr4	-,+	SCLT1,PCDH10	-2297289,1757561
chr20:47536401-47537593	chr20	+	47536425	47537441	True	NM_006420,NM_020820	chr20,chr20	+,-	ARFGEF2,PREX1	833,-92005
chr18:56975303-56975848	chr18	+	56975323	56975681	True	NM_181654,NM_002091	chr18,chr18	-,+	CPLX4,GRP	10250,-87974
chr3:44496816-44497831	chr3	+	44496841	44497510	True	NM_018651,NM_181489	chr3,chr3	+,-	ZNF167,ZNF445	99202,21715
chr11:64979835-64980578	chr11	+	64979934	64980482	True	NM_172230,NM_001004326,NR_033396	chr11,chr11,chr11	-,+,+	SYVN1,SLC22A20,SLC22A20	-77931,828,828
chr8:11831073-11831856	chr8	+	11831375	11831749	True	NM_001033017,NM_001033018	chr8,chr8	+,-	DEFB135,DEFB136	8080,409
chr2:39665067-39665279	chr2	+	39665131	39665310	True	NR_037875,NM_003618	chr2,chr2	+,-	LOC728730,MAP4K3	-625,-912
chr11:47662262-47662539	chr11	+	47662262	47662362	True	NM_014342,NM_001164379	chr11,chr11	-,+	MTCH2,FAM180B	1904,-54085
chr15:67543740-67545479	chr15	+	67544051	67545323	True	NM_001031715,NM_022784,NM_024666	chr15,chr15,chr15	+,+,-	IQCH,IQCH,AAGAB	1814,1814,1814
chr15:75183002-75184120	chr15	+	75183099	75184115	True	NM_002435,NM_020447	chr15,chr15	+,-	MPI,C15orf17	-742,15397
chr2:219263643-219263949	chr2	+	219263833	219263909	True	NM_022152,NM_021198,NR_029500,NM_182642	chr2,chr2,chr2,chr2	-,+,+,+	TMBIM1,CTDSP1,MIR26B,CTDSP1	-106553,568,3459,904
chr11:788954-789870	chr11	+	789080	789730	True	NM_001004,NM_001191060,NM_024698,NM_001191061,NM_016564	chr11,chr11,chr11,chr11,chr11	+,-,-,-,-	RPLP2,SLC25A22,SLC25A22,SLC25A22,CEND1	20205,8315,6583,8589,446
chr4:91067953-91069035	chr4	+	91067953	91069000	True	NM_001145065,NM_001146055	chr4,chr4	+,-	FAM190A,SNCA	-19331,-308506
chr11:73712638-73712979	chr11	+	73712644	73712944	True	NM_022803,NM_003356,NM_153614	chr11,chr11,chr11	-,-,+	UCP3,UCP3,DNAJB13	7388,7388,-51331
chr4:24324742-24325483	chr4	+	24324761	24324916	True	NR_030299,NM_003102	chr4,chr4	-,+	MIR573,SOD3	197048,472168
chr4:122290342-122291413	chr4	+	122290520	122291432	True	NM_198179,NR_024365	chr4,chr4	-,+	QRFPR,LOC100192379	10799,394307
chr4:110485587-110487345	chr4	+	110485762	110486842	True	NM_017918,NM_001226	chr4,chr4	+,-	CCDC109B,CASP6	-4466,137848
chr7:129591739-129592273	chr7	+	129591744	129592102	True	NM_182697,NM_001202498,NM_003344,NM_014997	chr7,chr7,chr7,chr7	-,-,-,+	UBE2H,UBE2H,UBE2H,KLHDC10	748,731,748,118246
chr20:4805541-4807271	chr20	+	4805571	4807227	True	NM_012409,NM_170774,NM_014737	chr20,chr20,chr20	+,-,-	PRND,RASSF2,RASSF2	-103068,-9802,-1280
chr14:95942233-95942457	chr14	+	95942299	95942505	True	NM_016417,NM_152592	chr14,chr14	+,-	GLRX5,C14orf49	58817,-126
chr2:130690536-130691031	chr2	+	130690624	130690764	True	NR_026740,NM_032144	chr2,chr2	-,+	LOC389033,RAB6C	1176,46470
chr10:12086465-12086906	chr10	+	12086609	12086717	True	NM_018706,NM_080599,NM_015542	chr10,chr10,chr10	+,-,-	DHTKD1,UPF2,UPF2	24216,-1586,-1801
chr11:66104592-66104991	chr11	+	66104668	66105038	True	NM_001024957,NM_015399,NM_004292,NM_153266	chr11,chr11,chr11,chr11	-,-,-,+	BRMS1,BRMS1,RIN1,TMEM151A	7594,7594,-668,-45346
chr14:95786215-95786498	chr14	+	95786214	95786547	True	NR_015415,NM_024734	chr14,chr14	+,-	FLJ45244,CLMN	-162240,27
chr16:57022986-57023514	chr16	+	57023367	57023511	True	NM_024946,NM_032206	chr16,chr16	-,+	FAM192A,NLRC5	196515,-8
chr19:6670263-6670863	chr19	+	6670280	6670910	True	NM_003807,NM_172014,NM_004240	chr19,chr19,chr19	-,-,+	TNFSF14,TNFSF14,TRIP10	109,109,68796
chr12:49069566-49070363	chr12	+	49069594	49070038	True	NR_029448,NR_002951,NM_017822	chr12,chr12,chr12	+,-,-	LOC255411,SNORA2B,C12orf41	51179,-8218,6047
chr2:33364218-33365825	chr2	+	33364252	33365459	True	NM_001166264,NM_001166265,NM_001166266,NM_000627,NM_015475	chr2,chr2,chr2,chr2,chr2	+,+,+,+,-	LTBP1,LTBP1,LTBP1,LTBP1,FAM98A	-4646,-4646,-4646,-4646,458960
chr1:3768905-3769438	chr1	+	3768912	3769482	True	NM_004402,NM_014704	chr1,chr1	+,-	DFFB,KIAA0562	4362,4365
chr11:64490298-64490824	chr11	+	64490590	64490790	True	NM_153378,NM_138732,NM_015080	chr11,chr11,chr11	+,-,-	SLC22A12,NRXN2,NRXN2	-132359,24,24
chr11:44998471-44999268	chr11	+	44998518	44999230	True	NM_006034,NR_026681	chr11,chr11	-,+	TP53I11,LOC221122	-25910,-3123
chr7:151574812-151575034	chr7	+	151574824	151575076	True	NM_145292,NM_016203	chr7,chr7	+,-	GALNTL5,PRKAG2	78387,-508
chr13:25945014-25946017	chr13	+	25945168	25945778	True	NM_004685,NM_016529	chr13,chr13	-,+	MTMR6,ATP8A2	-83464,430
chr1:205474073-205474305	chr1	+	205474089	205474339	True	NM_212503,NM_002596,NR_027086,NM_212502	chr1,chr1,chr1,chr1	+,+,-,+	CDK18,CDK18,LOC284578,CDK18	-456,-456,51474,-456
chr19:39832161-39832368	chr19	+	39832260	39832410	True	NM_018028,NM_004877	chr19,chr19	+,-	SAMD4B,GMFG	697,-5534
chr14:102975023-102975530	chr14	+	102975035	102975475	True	NM_152326,NR_036192	chr14,chr14	-,+	ANKRD9,MIR4309	703,30505
chr19:16312748-16313922	chr19	+	16312976	16313902	True	NM_001130524,NM_032493,NM_054113	chr19,chr19,chr19	+,+,-	AP1M1,AP1M1,CIB3	-4362,-4362,-28690
chr5:139925229-139925839	chr5	+	139925617	139925721	True	NM_001035235,NM_003732	chr5,chr5	-,+	SRA1,EIF4EBP3	12019,1529
chr5:175302992-175303682	chr5	+	175302992	175303720	True	NM_032361,NM_001008220	chr5,chr5	-,+	THOC3,CPLX2	91875,-4543
chr15:73777221-73777716	chr15	+	73777220	73777764	True	NM_001042367,NM_005477	chr15,chr15	+,-	C15orf60,HCN4	-41772,-115615
chrX:18466564-18467268	chrX	+	18466564	18467317	True	NM_001037343,NR_033717	chrX,chrX	+,-	CDKL5,SCML2	-6275,-93720
chr11:124973227-124974191	chr11	+	124973341	124974189	True	NM_198277,NM_001080546	chr11,chr11	+,-	SLC37A2,TMEM218	-40379,-136
chr22:24301483-24301689	chr22	+	24301483	24301620	True	NM_000854,NM_001080843,NM_001084393	chr22,chr22,chr22	-,-,+	GSTT2,GSTT2B,DDTL	1824,1799,7405
chr22:24301483-24301689	chr22	-	24324086	24324223	False	NM_001355,NM_000854,NM_001084392	chr22,chr22,chr22	-,+,-	DDT,GSTT2,DDT	-2067,-1824,-7406
chr5:92920952-92921261	chr5	+	92921005	92921205	True	NR_021490,NR_021491,NM_005654	chr5,chr5,chr5	-,-,+	FLJ42709,FLJ42709,NR2F1	-4002,-4052,-2013
chr9:123604999-123605227	chr9	+	123605003	123605177	True	NM_005047,NR_024408	chr9,chr9	-,+	PSMD5,LOC253039	79,142
chr6:14117986-14118203	chr6	+	14118009	14118241	True	NM_001031713,NM_001040280,NM_004233	chr6,chr6,chr6	-,+,+	CCDC90A,CD83,CD83	-303220,-195,-195
chrX:73165914-73167082	chrX	+	73166258	73167130	True	NR_001564,NR_024582	chrX,chrX	-,+	XIST,NCRNA00183	-93670,-2158
chr15:79104204-79104416	chr15	+	79104291	79104361	True	NR_036495,NM_014272	chr15,chr15	+,-	LOC646938,ADAMTS7	-59963,-518
chr1:24153140-24153384	chr1	+	24153177	24153256	True	NM_000191,NM_001166059,NM_007260	chr1,chr1,chr1	-,-,+	HMGCL,HMGCL,LYPLA2	-1228,-1228,-35585
chr20:34126968-34127522	chr20	+	34127489	34127551	True	NM_015966,NM_198398,NM_001145350	chr20,chr20,chr20	+,+,-	ERGIC3,ERGIC3,C20orf173	2226,2226,-10008
chr5:150227071-150228017	chr5	+	150227144	150228056	True	NM_001172831,NM_001145805	chr5,chr5	-,+	ZNF300,IRGM	56539,-1110
chr8:1456424-1456968	chr8	+	1456706	1456964	True	NM_004745,NR_033895	chr8,chr8	+,-	DLGAP2,LOC286083	-7188,-205879
chr22:48882211-48882561	chr22	+	48882343	48882553	True	NR_033377,NM_001082967	chr22,chr22	-,+	FLJ46257,FAM19A5	-855025,2734
chr18:3262783-3262998	chr18	+	3262785	3263013	True	NM_001144945,NM_001144944,NM_033546,NM_019856	chr18,chr18,chr18,chr18	+,+,+,-	MYL12B,MYL12B,MYL12B,MYOM1	-120,-226,-726,-42679
chr6:152958529-152959653	chr6	+	152958637	152959677	True	NM_025107,NM_182961,NM_033071	chr6,chr6,chr6	+,-,-	MYCT1,SYNE1,SYNE1	59352,-103,-651
chr21:40120549-40120800	chr21	+	40120568	40120690	True	NR_027067,NM_005239	chr21,chr21	-,+	NCRNA00114,ETS2	3541,57158
chr7:156804657-156805385	chr7	+	156804695	156805162	True	NM_005515,NM_138400,NM_001165255	chr7,chr7,chr7	-,+,-	MNX1,NOM1,MNX1	-1348,-62329,-2566
chr1:225842042-225842352	chr1	+	225842082	225842315	True	NM_001130440,NM_018212,NM_001008493	chr1,chr1,chr1	+,-,-	SRP9,ENAH,ENAH	123199,-1237,-1237
chr2:232458596-232459506	chr2	+	232458755	232459501	True	NM_006056,NM_152614	chr2,chr2	-,+	NMUR1,C2orf57	-63573,-1231
chr7:66206610-66206840	chr7	+	66206796	66206856	True	NR_003934,NM_014504	chr7,chr7	-,+	LOC729156,RABGEF1	103007,-1204
chr15:65880345-65880860	chr15	+	65880672	65880742	True	NM_030800,NM_004727	chr15,chr15	-,+	C15orf44,SLC24A1	22719,33527
chr1:160055288-160055633	chr1	+	160055300	160055670	True	NM_052868,NM_004983	chr1,chr1	-,+	IGSF8,KCNJ9	12788,-3994
chr16:18571020-18571314	chr16	+	18571028	18571259	True	NM_001004060,NM_173614,NR_003569	chr16,chr16,chr16	-,-,+	NOMO2,NOMO2,ABCC6P1	2233,2233,11310
chr16:18571020-18571314	chr16	-	14929801	14930032	False	NR_023387,NM_014287	chr16,chr16	-,+	ABCC6P2,NOMO1	-11242,-2217
chr16:18571020-18571314	chr16	-	16328617	16328850	False	NM_001079528,NM_001004067	chr16,chr16	-,+	ABCC6,NOMO3	-11289,-2287
chr19:55742005-55742213	chr19	+	55742004	55742262	True	NM_173804,NM_032430	chr19,chr19	-,+	TMEM86B,BRSK1	-1372,53271
chr9:109878414-109879126	chr9	+	109878602	109878968	True	NM_002874,NR_031752	chr9,chr9	+,-	RAD23B,MIR548Q	166575,-29886
chrX:47504447-47504829	chrX	+	47504474	47504878	True	NM_001114123,NR_028119,NM_005229	chrX,chrX,chrX	-,+,-	ELK1,LOC100133957,ELK1	5175,13353,5175
chrX:91229910-91231210	chrY	+	5067685	5068474	False	NM_032973,NR_001540	chrY,chrY	+,-	PCDH11Y,TTTY23	-143605,1043228
chrX:91229910-91231210	chrX	+	91230048	91231017	True	NM_001168363,NM_004538	chrX,chrX	+,-	PCDH11X,NAP1L3	-139648,1697728
chr17:43302168-43302425	chr17	+	43302256	43302408	True	NM_152343,NM_005892	chr17,chr17	-,+	C17orf46,FMNL1	37121,-3015
chr1:151734237-151734926	chr1	+	151734255	151734943	True	NM_016178,NM_001134939,NM_031420	chr1,chr1,chr1	+,+,-	OAZ3,OAZ3,MRPL9	4187,501,1147
chr17:53828735-53829811	chr17	+	53828856	53829550	True	NM_001102402,NM_021213,NM_001099640	chr17,chr17,chr17	+,+,-	PCTP,PCTP,TMEM100	-441,-567,-19374
chr1:26395040-26395772	chr1	+	26395385	26395458	True	NR_026685,NM_032588	chr1,chr1	+,-	PDIK1L,TRIM63	42197,-1264
chr7:74379607-74380108	chr7	+	74379636	74380105	True	NM_001025202,NM_001145063	chr7,chr7	-,+	STAG3L2,GATSL1	-72905,-604
chr7:74379607-74380108	chr7	-	99868630	99869018	False	NR_028040,NM_001004351,NR_028039,NR_028038,NM_178831	chr7,chr7,chr7,chr7,chr7	-,+,-,-,-	GATS,SPDYE3,GATS,GATS,GATS	887,36306,887,887,887
chr7:74379607-74380108	chr7	+	72569871	72570347	False	NR_002206,NR_003664,NR_003580	chr7,chr7,chr7	+,-,+	GTF2IP1,SPDYE8P,LOC100093631	-896,-69562,-910
chr7:74379607-74380108	chr7	-	74866467	74866788	False	NM_001145064,NR_003664	chr7,chr7	-,+	GATSL2,SPDYE8P	603,69744
chr7:74379607-74380108	chr7	-	74652127	74652599	False	NR_002206,NM_001003795,NR_003580	chr7,chr7,chr7	-,+,-	GTF2IP1,GTF2IRD2B,LOC100093631	896,-143831,910
chr15:72564339-72564555	chr15	+	72564371	72564439	True	NM_020214,NR_027262	chr15,chr15	-,+	PARP6,C15orf34	-743,104014
chr16:30997080-30997361	chr16	+	30997229	30997309	True	NM_001142778,NM_025193,NM_052874,NM_001142777	chr16,chr16,chr16,chr16	+,+,-,+	HSD3B7,HSD3B7,STX1B,HSD3B7	-761,-761,24570,-761
chr16:31521752-31522017	chr16	+	31521883	31522047	True	NM_022744,NM_016633	chr16,chr16	-,+	C16orf58,AHSP	-2177,17155
chr1:224034489-224034880	chr1	+	224034624	224034891	True	NM_001031685,NM_005426,NM_001748	chr1,chr1,chr1	-,-,+	TP53BP2,TP53BP2,CAPN2	-950,-950,-134563
chr18:59559594-59560493	chr18	+	59559597	59560511	True	NM_020854,NM_173557	chr18,chr18	+,-	KIAA1468,RNF152	294012,147
chr22:26960436-26960641	chr22	+	26960575	26960689	True	NM_001008566,NR_031615,NM_001886	chr22,chr22,chr22	-,-,+	TPST2,MIR548J,CRYBA4	731,-9286,57238
chrX:147279796-147280374	chrX	+	147279854	147280155	True	NM_152578,NR_024503	chrX,chrX	+,-	FMR1NB,FMR1-AS1	-217056,-276178
chr12:69078646-69078961	chr12	+	69078754	69078833	True	NM_020401,NR_033335	chr12,chr12	+,-	NUP107,SNORA70G	1897,-57599
chr4:54461825-54463168	chr4	+	54461968	54463214	True	NM_001126328,NM_030917	chr4,chr4	-,+	LNX1,FIP1L1	-4244,-218200
chr16:86545185-86545649	chr16	+	86545311	86545647	True	NM_001451,NR_036444,NR_033925	chr16,chr16,chr16	+,-,-	FOXF1,LOC400550,LOC400550	-1229,-2845,-2845
chr11:125661071-125662043	chr11	+	125661104	125661686	True	NM_212555,NM_001129883	chr11,chr11	-,+	PATE2,PATE3	-12390,-3149
chr3:131736379-131736665	chr3	+	131736381	131736645	True	NM_001099,NM_130808	chr3,chr3	+,-	ACPP,CPNE4	299565,17249
chr2:114513993-114514209	chr2	+	114514032	114514228	True	NM_013412,NM_025181	chr2,chr2	+,-	RABL2A,SLC35F5	-129266,222
chr3:20089195-20090512	chr3	+	20089489	20090203	True	NM_003884,NR_027694	chr3,chr3	+,-	KAT2B,C3orf48	-8016,-35724
chr19:11642310-11642688	chr19	+	11642440	11642500	True	NM_001142464,NM_001142465,NM_016581,NR_024551,NM_001299	chr19,chr19,chr19,chr19,chr19	-,-,-,-,+	ECSIT,ECSIT,ECSIT,ECSIT,CNN1	-2453,-2453,-2453,-2760,7078
chr9:19254849-19256473	chr9	+	19255432	19255923	True	NM_001010,NM_017925	chr9,chr9	-,+	RPS6,DENND4C	124363,34825
chr5:176074620-176074876	chr5	+	176074625	176074887	True	NM_003085,NM_130465,NM_012171,NM_001006616	chr5,chr5,chr5,chr5	-,+,+,+	SNCB,TSPAN17,TSPAN17,TSPAN17	-17068,-288,-288,-288
chr14:74035133-74035342	chr14	+	74035171	74035329	True	NM_203309,NM_006821	chr14,chr14	-,+	HEATR4,ACOT2	-9520,442
chr9:130341534-130341877	chr9	+	130341591	130341917	True	NM_001032221,NM_001035534	chr9,chr9	+,-	STXBP1,FAM129B	32568,-323
chr5:19923518-19924042	chr5	+	19923543	19924091	True	NM_001167667,NR_027027	chr5,chr5	-,+	CDH18,GUSBP1	64312,1535497
chr12:77380337-77382303	chr12	+	77380503	77381885	True	NM_203394,NM_015336	chr12,chr12	-,+	E2F7,ZDHHC17	77526,-222701
chr13:37574139-37574404	chr13	+	37574143	37574207	True	NM_001142364,NM_181503,NM_013338	chr13,chr13,chr13	-,+,-	ALG5,EXOSC8,ALG5	-639,470,-639
chr4:77332409-77333633	chr4	+	77332730	77333141	True	NM_001042784,NM_020859	chr4,chr4	-,+	CCDC158,SHROOM3	-4272,23111
chr15:44085118-44086160	chr15	+	44085160	44085833	True	NM_016400,NM_001199885,NM_001033517,NM_001018108,NR_037673,NR_037672,NM_001199878,NM_001199876,NR_031695,NM_001199875	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,-,+,+,+,+,+,-,+	C15orf63,C15orf63,SERINC4,SERF2,SERF2-C15ORF63,SERF2,SERF2,SERF2,MIR1282,SERF2	6785,6785,6472,-1171,-1037,-1037,-636,-1037,174,-1037
chr1:228194801-228195099	chr1	+	228194875	228195123	True	NM_033131,NM_003395	chr1,chr1	+,-	WNT3A,WNT9A	-203,-59199
chr14:90425048-90426632	chr14	+	90425261	90426621	True	NM_145231,NM_018319,NM_001008744	chr14,chr14,chr14	-,+,+	EFCAB11,TDP1,TDP1	-4172,-3076,-3076
chr3:186081059-186082115	chr3	+	186081237	186081955	True	NM_016306,NM_001080744,NM_001080745,NM_001346	chr3,chr3,chr3,chr3	+,-,-,-	DNAJB11,DGKG,DGKG,DGKG	206511,-1214,-1214,-1214
chr19:56907595-56908611	chr19	+	56908075	56908589	True	NM_001159861,NM_001159860,NM_144690,NR_037161,NR_037160,NR_037159,NM_152478	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,-,+,+,+,+	ZNF583,ZNF583,ZNF582,LOC386758,LOC386758,LOC386758,ZNF583	7128,6793,-3186,-3082,-3082,-3082,7104
chr21:42535466-42537336	chr21	+	42535828	42537361	True	NR_024100,NM_138991,NM_138992,NM_012105,NR_036167	chr21,chr21,chr21,chr21,chr21	-,+,+,+,+	C21orf130,BACE2,BACE2,BACE2,MIR3197	-15837,2366,2366,2366,2122
chr11:65546586-65546913	chr11	+	65546631	65546951	True	NM_138368,NM_004561	chr11,chr11	-,+	DKFZp761E198,OVOL1	921,7577
chr16:2511234-2511841	chr16	+	2511347	2511821	True	NM_001048212,NM_006181,NM_025108	chr16,chr16,chr16	-,+,+	CEMP1,NTN3,C16orf59	69638,9678,-1283
chr1:208071596-208073136	chr1	+	208071709	208073063	True	NM_001025109,NR_026817	chr1,chr1	-,+	CD34,LOC148696	11678,-80036
chr1:186428558-186429271	chr1	+	186428819	186429303	True	NM_002597,NM_022375	chr1,chr1	-,+	PDC,OCLM	986,-59177
chr7:45927584-45928321	chr7	+	45927587	45928106	True	NM_000596,NM_000598	chr7,chr7	+,-	IGFBP1,IGFBP3	24,32815
chr19:12407204-12409102	chr19	+	12407481	12408514	True	NM_003437,NM_001164276,NM_016264	chr19,chr19,chr19	+,-,-	ZNF136,ZNF44,ZNF44	-133667,-1767,-1767
chr2:211036218-211036501	chr2	+	211036255	211036501	True	NM_152519,NM_199229	chr2,chr2	-,+	C2orf67,RPE	-204,-168925
chr6:78174172-78175333	chr6	+	78174477	78175354	True	NM_000863,NM_001010844	chr6,chr6	-,+	HTR1B,IRAK1BP1	-1357,1401834
chr9:117374470-117375009	chr9	+	117374509	117374833	True	NM_153045,NM_001199233	chr9,chr9	+,-	C9orf91,LOC100505478	-854,69586
chr4:100871482-100871727	chr4	+	100871499	100871751	True	NM_001031723,NM_002106,NR_002799	chr4,chr4,chr4	-,-,+	DNAJB14,H2AFZ,LOC256880	-3620,-11,58
chrX:129302481-129302901	chrX	+	129302483	129302774	True	NM_001130847,NM_004794,NM_004208,NM_145812,NM_145813	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	AIFM1,RAB33A,AIFM1,AIFM1,AIFM1	-2622,2998,-2622,-2622,-2622
chr15:31743224-31745214	chr15	+	31743537	31745193	True	NM_015995,NM_130901	chr15,chr15	+,-	KLF13,OTUD7A	-124507,202400
chr8:56679228-56680051	chr8	+	56679233	56680081	True	NM_152417,NM_024831	chr8,chr8	-,+	TMEM68,TGS1	5854,5709
chr5:141499814-141501768	chr5	+	141499901	141501730	True	NM_005471,NM_030571	chr5,chr5	-,+	GNPDA1,NDFIP1	-107281,-11629
chr19:15376322-15376854	chr19	+	15376398	15376584	True	NM_033025,NM_058243	chr19,chr19	+,-	SYDE1,BRD4	-158235,14728
chr15:59397184-59397435	chr15	+	59397192	59397414	True	NM_004701,NR_031750	chr15,chr15	+,-	CCNB2,MIR2116	-31,66097
chr11:129815322-129815551	chr11	+	129815374	129815552	True	NR_024233,NM_199439,NM_199438	chr11,chr11,chr11	+,-,-	NCRNA00167,PRDM10,PRDM10	56966,2015,2015
chr21:33448992-33449220	chr21	+	33449004	33449132	True	NR_024352,NR_038033	chr21,chr21	+,-	NCRNA00159,NCRNA00159	3496,9526
chr8:142518222-142518447	chr8	+	142518334	142518496	True	NM_032611,NM_207414	chr8,chr8	+,-	PTP4A3,FLJ43860	-86378,-1004
chr9:137005110-137006262	chr9	+	137005116	137005946	True	NR_023344,NM_017588,NM_052821	chr9,chr9,chr9	-,+,+	RNU6ATAC,WDR5,WDR5	23790,-3957,-253
chr11:47272583-47272885	chr11	+	47272737	47272902	True	NM_001130102,NM_001610,NM_001130101,NM_005693,NM_001131064	chr11,chr11,chr11,chr11,chr11	+,-,+,+,-	NR1H3,ACP2,NR1H3,NR1H3,ACP2	-2351,-2280,6594,6594,-2280
chr12:6798919-6799942	chr12	+	6799105	6799774	True	NM_001039917,NM_001039916,NM_001039919,NM_001135734,NM_001039920,NM_001039918,NM_133476,NM_001164094	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,-,-,-,-,-,-,+	ZNF384,ZNF384,ZNF384,ZNF384,ZNF384,ZNF384,ZNF384,COPS7A	-436,-1280,-436,-429,-436,-578,-578,33375
chr16:8817012-8817788	chr16	+	8817097	8817670	True	NM_001127448,NM_015421	chr16,chr16	+,-	ABAT,TMEM186	-2576,73890
chr7:105172882-105174441	chr7	+	105172908	105174118	True	NM_021930,NM_019042	chr7,chr7	+,-	RINT1,PUS7	-427,-10223
chr19:11095684-11096195	chr19	+	11095709	11096143	True	NM_001128846,NM_001128847,NM_024029,NM_001128845,NM_001128848	chr19,chr19,chr19,chr19,chr19	+,+,-,+,+	SMARCA4,SMARCA4,YIPF2,SMARCA4,SMARCA4	-932,-932,-56352,-932,-932
chr6:33384177-33385318	chr6	+	33384226	33385271	True	NM_002636,NM_001014838,NM_006772,NM_001014433,NM_001014837,NM_001014840,NM_024165,NR_027692,NM_015921	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	+,-,+,-,-,-,+,+,-	PHF1,CUTA,SYNGAP1,CUTA,CUTA,CUTA,PHF1,PHF1,CUTA	-5516,844,2575,844,844,844,-5516,-5516,844
chr6:33384177-33385318	chr6_ssto_hap7	+	4864472	4865517	False	NM_002636,NM_001014838,NM_006772,NM_001014433,NM_001014837,NM_001014840,NM_024165,NR_027692	chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7	+,-,+,-,-,-,+,+	PHF1,CUTA,SYNGAP1,CUTA,CUTA,CUTA,PHF1,PHF1	-5514,844,2575,844,844,844,-5514,-5514
chrX:135578216-135578663	chrX	+	135578401	135578707	True	NM_001163280,NM_001727,NM_014500,NM_001173516	chrX,chrX,chrX,chrX	+,+,+,-	HTATSF1,BRS3,HTATSF1,MAP7D3	530,-8327,963,-239760
chr8:135727355-135728692	chr8	+	135727387	135728678	True	NM_020863,NR_002438,NM_001174157	chr8,chr8,chr8	-,+,-	ZFAT,ZFAT-AS1,ZFAT	-2095,-117134,-2095
chr13:111266670-111267779	chr13	+	111266670	111267828	True	NM_017817,NM_018210	chr13,chr13	-,+	RAB20,CARKD	-52599,179
chr20:2646001-2646706	chr20	+	2646003	2646631	True	NR_004399,NM_006899,NR_002738,NR_002739,NM_174855,NM_174856	chr20,chr20,chr20,chr20,chr20,chr20	+,-,+,+,-,-	SNORD86,IDH3B,SNORD57,SNORD56,IDH3B,IDH3B	-9312,-1160,-8470,-8785,-1160,-1160
chr2:219471333-219472605	chr2	+	219471620	219472346	True	NM_020935,NM_032726	chr2,chr2	-,+	USP37,PLCD4	-38536,141
chr9:84607749-84608621	chr9	+	84607754	84608638	True	NM_005077,NM_001001670	chr9,chr9	-,+	TLE1,FAM75D1	-304158,-4118
chr9:135286264-135286555	chr9	+	135286310	135286444	True	NM_007344,NM_207417	chr9,chr9	-,+	TTF1,C9orf171	-4089,-750
chrX:153642002-153642951	chrX	+	153642117	153642757	True	NM_001009932,NM_001009933,NM_001009934,NM_000116,NM_006730,NM_181313,NM_181312,NM_181311,NR_024048	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,+,-,+,+,+,+	DNASE1L1,DNASE1L1,DNASE1L1,TAZ,DNASE1L1,TAZ,TAZ,TAZ,TAZ	-1690,-1690,-1690,-2291,-4542,-2291,-2291,-2291,-2291
chr7:65866482-65867300	chr7	+	65866514	65867346	True	NR_026873,NM_003596	chr7,chr7	-,+	NCRNA00174,TPST1	-1119,-196309
chr15:70127099-70127746	chr15	+	70127469	70127781	True	NR_026764,NR_030714	chr15,chr15	+,-	C15orf50,MIR629	-35,244076
chr3:135747853-135748386	chr3	+	135747960	135748434	True	NM_181897,NM_001145417	chr3,chr3	+,-	PPP2R3A,MSL2	-6437,164926
chr3:160168197-160169159	chr3	+	160168227	160168756	True	NR_029525,NM_173084	chr3,chr3	+,-	MIR16-2,TRIM59	-45745,-601
chr11:66626597-66626812	chr11	+	66626675	66626861	True	NM_024036,NM_022172	chr11,chr11	+,-	LRFN4,PC	-1850,48529
chr2:54954697-54955579	chr2	+	54954839	54955623	True	NM_001039753,NM_007008	chr2,chr2	+,-	EML6,RTN4	-2753,281897
chr1:36239053-36239793	chr1	+	36239392	36239625	True	NM_022111,NM_017629,NM_001190481	chr1,chr1,chr1	-,+,-	CLSPN,EIF2C4,CLSPN	-3841,34202,-3841
chr6:37666957-37667308	chr6	+	37666978	37667157	True	NM_153487,NM_021943	chr6,chr6	-,+	MDGA1,ZFAND3	-1212,120149
chr19:17187311-17187575	chr19	+	17187406	17187568	True	NM_001130065,NM_001011699,NM_033417,NM_004145	chr19,chr19,chr19,chr19	+,-,-,+	MYO9B,HAUS8,HAUS8,MYO9B	-866,-1063,-1063,-866
chr13:41897781-41898803	chr13	+	41897940	41898428	True	NM_004294,NM_024561	chr13,chr13	-,+	MTRF1,NAA16	-60227,-12650
chr19:19844055-19844496	chr19	+	19844070	19844348	True	NM_033204,NM_021030	chr19,chr19	+,-	ZNF101,ZNF14	-64460,-149
chr1:24648849-24649082	chr1	+	24648908	24649048	True	NM_198173,NM_021180,NM_001195010,NM_001199013,NM_198174	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	GRHL3,GRHL3,GRHL3,C1orf201,GRHL3	-3147,481,-2903,91264,-3147
chr6:55203865-55205533	chr6	+	55204169	55205349	True	NM_207410,NM_001042406	chr6,chr6	+,-	GFRAL,HMGCLL1	-11953,238726
chr6:149950579-149951619	chr6	+	149950638	149951471	True	NM_138785,NM_001204076	chr6,chr6	+,-	C6orf72,KATNA1	-63168,18528
chr3:167176343-167176953	chr3	+	167176393	167176856	True	NM_006217,NM_001122752	chr3,chr3	-,+	SERPINI2,SERPINI1	15019,276575
chr1:32705697-32705904	chr1	+	32705766	32705896	True	NM_032648,NR_026850	chr1,chr1	+,-	FAM167B,MTMR9LP	6921,1465
chr2:238711126-238711514	chr2	+	238711129	238711524	True	NM_001080504,NR_033308	chr2,chr2	+,-	RBM44,RAB17	-3792,-211360
chr1:26560601-26560864	chr1	+	26560665	26560903	True	NM_022778,NM_001077262	chr1,chr1	+,-	CCDC21,UBXN11	-23,72342
chr1:178063818-178065149	chr1	+	178064054	178064929	True	NR_027982,NM_170692	chr1,chr1	-,+	LOC100302401,RASAL2	-926,-1242
chr1:118470156-118471373	chr1	+	118470204	118471405	True	NM_001135589,NM_006784,NM_017686	chr1,chr1,chr1	-,+,-	GDAP2,WDR3,GDAP2	947,966,947
chr18:12659559-12660613	chr18	+	12659768	12660197	True	NM_147163,NM_001128626,NM_001128627,NM_020148	chr18,chr18,chr18,chr18	+,-,-,-	PSMG2,SPIRE1,SPIRE1,SPIRE1	-1096,-1856,-3037,-1856
chr7:143079492-143079774	chr7	+	143079687	143079801	True	NM_001010972,NM_001031690,NM_003461	chr7,chr7,chr7	+,-,+	ZYX,FAM131B,ZYX	-1378,-19847,-1378
chr9:137220591-137220845	chr9	+	137220662	137220822	True	NM_002957,NR_023344	chr9,chr9	+,-	RXRA,RNU6ATAC	-2397,-190976
chr9:116168291-116168711	chr9	+	116168638	116168712	True	NR_027261,NM_017443,NM_152786,NM_000031	chr9,chr9,chr9,chr9	-,-,+,-	POLE3,POLE3,C9orf43,ALAD	4293,4367,4309,-5020
chr1:112948078-112948527	chr1	+	112948216	112948530	True	NM_018704,NR_036210	chr1,chr1	+,-	CTTNBP2NL,MIR4256	-9478,55975
chr1:149224145-149224541	chr1	+	149224360	149224556	True	NM_001024599,NR_027002	chr1,chr1	-,+	HIST2H2BF,LOC388692	174723,54919
chrX:67646617-67647034	chrX	+	67646751	67646824	True	NM_002547,NM_001195214	chrX,chrX	-,+	OPHN1,YIPF6	6526,71799
chr22:41958191-41959322	chr22	+	41958258	41959264	True	NM_001018052,NM_014460	chr22,chr22	-,+	POLR3H,CSDC2	-17779,-1295
chr19:38715331-38715638	chr19	+	38715375	38715617	True	NM_001135156,NM_004647,NM_001135155,NM_001166103	chr19,chr19,chr19,chr19	-,-,-,+	DPF1,DPF1,DPF1,SPINT2	4750,-485,-485,39480
chr2:23655971-23656202	chr2	+	23656017	23656201	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	493783,-47770
chr15:31395344-31395870	chr15	+	31395369	31395645	True	NM_014967,NM_002420	chr15,chr15	+,-	FAN1,TRPM1	-199344,-1445
chr19:47127430-47128086	chr19	+	47127445	47128107	True	NM_033258,NM_000960,NM_005184	chr19,chr19,chr19	-,-,+	GNG8,PTGIR,CALM3	9882,297,-22984
chr5:158879950-158880274	chr5	+	158879974	158880268	True	NR_037889,NR_027110	chr5,chr5	+,-	LOC285626,LOC285627	-121499,13066
chr20:17949960-17950609	chr20	+	17949982	17950428	True	NR_003045,NM_152227,NM_014426,NM_052865	chr20,chr20,chr20,chr20	-,-,-,+	SNORD17,SNX5,SNX5,C20orf72	-6393,-492,-828,-271
chr15:78585427-78585975	chr15	+	78585641	78586019	True	NM_025234,NM_001130183	chr15,chr15	-,+	WDR61,DNAJA4	5971,-27142
chr2:97427535-97427746	chr2	+	97427627	97427791	True	NR_024521,NM_020184	chr2,chr2	-,+	LMAN2L,CNNM4	-21814,-1039
chr18:29264002-29264429	chr18	+	29264001	29264395	True	NM_004775,NM_000371	chr18,chr18	-,+	B4GALT6,TTR	341,-92327
chr14:94912740-94914519	chr14	+	94912782	94914370	True	NM_001080451,NM_006215	chr14,chr14	-,+	SERPINA11,SERPINA4	4802,113412
chr20:3994287-3995463	chr20	+	3994597	3995487	True	NM_001134337,NR_029519,NM_001134338,NM_007219	chr20,chr20,chr20,chr20	-,+,-,-	RNF24,MIR103-2,RNF24,RNF24	779,-96514,779,617
chr18:8617753-8618598	chr18	+	8617774	8618500	True	NM_001025300,NR_024419	chr18,chr18	+,-	RAB12,LOC100192426	-8382,-250742
chr16:3932137-3933323	chr16	+	3932297	3933331	True	NM_005223,NM_004380,NM_001079846	chr16,chr16,chr16	+,-,-	DNASE1,CREBBP,CREBBP	-229415,-2176,-2176
chr19:57052614-57054224	chr19	+	57052701	57053914	True	NR_030740,NM_020828	chr19,chr19	-,+	ZNF667,ZFP28	-63931,-2435
chr7:26239991-26240271	chr7	+	26240122	26240300	True	NM_002137,NM_007276,NM_031243,NM_016587	chr7,chr7,chr7,chr7	-,+,-,+	HNRNPA2B1,CBX3,HNRNPA2B1,CBX3	163,530,163,1023
chr19:55882895-55883710	chr19	+	55883489	55883581	True	NM_000641,NM_001145402,NM_139172	chr19,chr19,chr19	-,-,+	IL11,FAM71E2,TMEM190	-1675,-8869,4622
chr6:43596307-43596561	chr6	+	43596319	43596393	True	NM_014628,NM_001003690,NM_019096	chr6,chr6,chr6	+,+,-	MAD2L1BP,MAD2L1BP,GTPBP2	7183,885,593
chr19:6372835-6373041	chr19	+	6372873	6373055	True	NM_004158,NM_032306	chr19,chr19	-,+	PSPN,ALKBH7	2855,-480
chr7:6484459-6486360	chr7	+	6484598	6486375	True	NM_001142936,NM_018890,NM_139179	chr7,chr7,chr7	-,+,-	DAGLB,RAC1,DAGLB	1318,-70531,1318
chr8:30709711-30710718	chr8	+	30710091	30710725	True	NM_031271,NM_005671	chr8,chr8	-,+	TEX15,UBXN8	-3558,-108461
chr16:841424-841794	chr16	+	841469	841841	True	NM_001025190,NM_022092,NM_016541,NM_058192	chr16,chr16,chr16,chr16	-,+,-,-	MSLNL,CHTF18,GNG13,RPUSD1	-8543,-2898,8942,-3086
chr15:42567296-42567770	chr15	+	42567641	42567783	True	NM_198141,NM_015497,NM_001110503	chr15,chr15,chr15	+,-,-	GANC,TMEM87A,TMEM87A	-1336,-1886,-1886
chr22:21981931-21982914	chr22	+	21982130	21982816	True	NM_152612,NM_001017964	chr22,chr22	+,-	CCDC116,YDJC	4269,1574
chr2:233405935-233406710	chr2	+	233406069	233406573	True	NM_005199,NM_004846,NM_145702	chr2,chr2,chr2	+,+,-	CHRNG,EIF4E2,TIGD1	-1683,8783,8703
chr10:82167755-82168165	chr10	+	82167802	82168136	True	NR_024572,NM_032333,NM_138812	chr10,chr10,chr10	+,+,-	C10orf58,C10orf58,DYDC1	5454,105,-51302
chr6:28492215-28493354	chr6	+	28492226	28493375	True	NM_001509,NM_182701,NM_003996	chr6,chr6,chr6	+,-,+	GPX5,GPX6,GPX5	413,-8656,413
chr6:28492215-28493354	chr6_cox_hap2	+	14430	15579	False	NM_001509,NM_052923,NM_003996	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,-,+	GPX5,SCAND3,GPX5	413,61793,413
chr19:49468915-49469935	chr19	+	49469008	49469784	True	NM_000146,NM_001161587	chr19,chr19	+,-	FTL,GYS1	-493,26876
chr19:36357698-36359248	chr19	+	36357728	36359194	True	NM_001024807,NM_004646,NM_032123,NM_199179,NM_005166,NM_199180	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+	APLP1,NPHS1,KIRREL2,KIRREL2,APLP1,KIRREL2	206,-14833,-9984,-9984,206,-9984
chr11:102186453-102188212	chr11	+	102186771	102188010	True	NM_001165,NM_052932,NM_182962	chr11,chr11,chr11	+,-,+	BIRC3,TMEM123,BIRC3	183,135815,183
chr11:9448516-9449100	chr11	+	9448729	9449147	True	NR_002962,NR_036539	chr11,chr11	+,-	SNORA23,LOC644656	1165,33148
chr16:20070258-20071231	chr16	+	20070262	20071178	True	NM_001002911,NM_153208	chr16,chr16	-,+	GPR139,IQCK	13972,-342535
chr12:111806082-111806383	chr12	+	111806102	111806274	True	NM_001177996,NM_001177997,NM_005475,NM_144671	chr12,chr12,chr12,chr12	-,-,+,-	FAM109A,FAM109A,SH2B3,FAM109A	701,701,37477,701
chr7:150021919-150022344	chr7	+	150021978	150022244	True	NM_001142928,NM_138434,NM_001164458,NM_023942	chr7,chr7,chr7,chr7	+,+,-,+	LRRC61,C7orf29,ACTR3C,LRRC61	-1736,4693,-1220,-1736
chr16:89679411-89680037	chr16	+	89679546	89679989	True	NM_001083314,NM_001128141,NM_004413	chr16,chr16,chr16	-,+,+	CHMP1A,DPEP1,DPEP1	44190,35,7010
chr7:116590107-116591423	chr7	+	116590728	116591440	True	NR_002329,NR_002330,NM_021908,NM_018412	chr7,chr7,chr7,chr7	+,-,+,+	ST7OT4,ST7OT1,ST7,ST7	2512,3008,1940,1940
chr14:81420468-81421346	chr14	+	81420712	81421227	True	NM_001018036,NM_001142626,NM_152446,NM_000369	chr14,chr14,chr14,chr14	+,+,-,+	TSHR,TSHR,C14orf145,TSHR	641,641,-14828,641
chr16:29874488-29875179	chr16	+	29874502	29875174	True	NM_006319,NR_024370,NR_015396	chr16,chr16,chr16	-,+,+	CDIPT,LOC440356,LOC440356	-71,7,-20
chr6:168714016-168715706	chr6	+	168714145	168715556	True	NM_214462,NM_001166412	chr6,chr6	-,+	DACT2,SMOC2	4903,126274
chr1:2124810-2125047	chr1	+	2124944	2125052	True	NM_003036,NR_024445,NM_182533	chr1,chr1,chr1	+,-,-	SKI,LOC100128003,C1orf86	35081,22,1212
chr10:120967839-120968764	chr10	+	120967922	120968807	True	NM_005308,NM_014098	chr10,chr10	+,-	GRK5,PRDX3	-777,-29577
chr16:14421594-14421895	chr16	+	14421842	14421902	True	NR_029854,NM_001134477	chr16,chr16	+,-	MIR365-1,PARN	-18753,302268
chr1:185142030-185142867	chr1	+	185142293	185142559	True	NM_017673,NM_001202423	chr1,chr1	+,-	SWT1,TRMT1L	-16060,-16063
chr2:219160000-219160729	chr2	+	219160039	219160550	True	NM_015488,NM_022152	chr2,chr2	+,-	PNKD,TMBIM1	-24988,-2759
chr19:46970953-46972456	chr19	+	46970987	46972003	True	NM_006247,NM_018215,NM_001103149	chr19,chr19,chr19	+,-,-	PPP5C,PNMAL1,PNMAL1	-120787,2871,2871
chr11:27697918-27699566	chr11	+	27698047	27699566	True	NM_170735,NR_033315	chr11,chr11	-,+	BDNF,BDNF-AS1	-16851,-169703
chr20:3387180-3388059	chr20	+	3387206	3388030	True	NM_001009984,NM_139322	chr20,chr20	-,+	C20orf194,ATRN	275,63634
chr2:172541993-172543963	chr2	+	172542071	172543822	True	NM_003705,NM_001378	chr2,chr2	-,+	SLC25A12,DYNC1I2	207051,159
chr14:73611894-73612341	chr14	+	73611916	73612390	True	NM_007318,NM_000021,NM_021260	chr14,chr14,chr14	+,+,-	PSEN1,PSEN1,ZFYVE1	-8831,-8831,-117996
chr20:62436668-62437284	chr20	+	62436667	62437067	True	NM_080622,NM_025224	chr20,chr20	+,-	ABHD16B,ZBTB46	55498,3
chr1:41950466-41951236	chr1	+	41950873	41951139	True	NM_001956,NR_037868	chr1,chr1	-,+	EDN2,LOC100507178	-529,-470662
chr15:83379033-83379299	chr15	+	83379071	83379279	True	NR_034139,NM_004644,NR_003011	chr15,chr15,chr15	-,-,+	LOC338963,AP3B2,SCARNA15	3516,-436,45417
chr11:118755963-118756240	chr11	+	118755963	118756181	True	NM_001716,NM_182557,NM_032966	chr11,chr11,chr11	+,-,+	CXCR5,BCL9L,CXCR5	-1473,25482,7919
chr11:209495-210608	chr11	+	209603	210655	True	NM_016526,NM_001098787,NM_021932	chr11,chr11,chr11	-,-,+	BET1L,BET1L,RIC8A	-2181,-2181,-1124
chr19:2279509-2280560	chr19	+	2279655	2279761	True	NM_198532,NM_004152	chr19,chr19	-,+	C19orf35,OAZ1	2470,-10186
chr22:35513748-35514741	chr22	+	35513800	35514686	True	NM_001008494,NM_005368	chr22,chr22	+,-	ISX,MB	-51721,498748
chr18:24218611-24219250	chr18	+	24218711	24219245	True	NM_198991,NR_026908	chr18,chr18	-,+	KCTD1,C18orf16	1113,226026
chr11:128562310-128562677	chr11	+	128562396	128562700	True	NM_001167681,NM_002017,NM_001143820	chr11,chr11,chr11	+,+,-	FLI1,FLI1,ETS1	1110,1112,-104943
chr15:71444683-71444935	chr15	+	71444781	71444933	True	NM_024817,NM_001102658	chr15,chr15	+,-	THSD4,CT62	-11052,-36942
chr19:49496709-49496977	chr19	+	49496745	49496909	True	NM_001161587,NM_006666,NR_027763,NM_002103	chr19,chr19,chr19,chr19	-,+,-,-	GYS1,RUVBL2,GYS1,GYS1	-135,246,-135,-135
chr5:122424468-122424925	chr5	+	122424485	122424941	True	NM_001136239,NM_000943	chr5,chr5	+,-	PRDM6,PPIC	-95,-52060
chr16:22015287-22015784	chr16	+	22015330	22015776	True	NM_173806,NR_033694,NM_001164579	chr16,chr16,chr16	-,-,+	PDZD9,PDZD9,C16orf52	-2899,-2899,3679
chr11:73881258-73881552	chr11	+	73881261	73881589	True	NM_015531,NM_016147	chr11,chr11	-,+	C2CD3,PPME1	525,778
chr1:44401220-44401657	chr1	+	44401231	44401631	True	NM_057090,NM_001136215,NM_006934,NM_057091	chr1,chr1,chr1,chr1	+,+,-,+	ARTN,ARTN,SLC6A9,ARTN	-2290,-2290,81416,-2290
chr6:167649854-167650104	chr6	+	167649981	167650145	True	NM_005299,NM_001143947	chr6,chr6	-,+	GPR31,UNC93A	-78662,54657
chr2:201391202-201391574	chr2	+	201391292	201391590	True	NM_001160033,NM_152524,NM_152387,NM_001160046	chr2,chr2,chr2,chr2	+,+,-,+	SGOL2,SGOL2,KCTD18,SGOL2	-478,-478,-16500,-478
chr13:113952287-113952684	chr13	+	113952323	113952694	True	NM_024719,NM_005561	chr13,chr13	-,+	GRTP1,LAMP1	65820,-906
chr9:65597066-65598041	chr9	+	65597114	65597590	True	NR_024496,NM_015667	chr9,chr9	+,-	LOC442421,FAM75A7	896678,-87504
chr9:65597066-65598041	chr9	-	39138182	39138273	False	NM_033655,NM_001085452	chr9,chr9	-,+	CNTNAP3,FAM75A1	150077,217425
chr9:65597066-65598041	chr9	+	43855546	43856032	False	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	-224816,-170712
chr19:58739247-58739776	chr19	+	58739247	58739747	True	NM_014480,NM_024620	chr19,chr19	+,-	ZNF544,ZNF329	322,-77099
chr19:58897437-58897792	chr19	+	58897454	58897702	True	NM_138466,NM_001009,NM_001195135,NM_001129730	chr19,chr19,chr19,chr19	-,+,+,-	ZNF837,RPS5,LOC646862,ZNF837	-5065,933,9754,-5065
chr2:181912482-181912898	chr2	+	181912604	181912788	True	NM_001030311,NM_006357	chr2,chr2	-,+	CERKL,UBE2E3	609096,-67319
chr1:110996459-110996694	chr1	+	110996468	110996557	True	NM_032414,NM_006402	chr1,chr1	+,-	PROK1,HBXIP	-2731,-45922
chr6:167651346-167651819	chr6	+	167651401	167651813	True	NM_005299,NM_001143947	chr6,chr6	-,+	GPR31,UNC93A	-80082,52989
chr2:91961132-91961426	chr22	+	25004482	25004538	False	NM_005265,NM_207644,NM_001032365,NM_001032364	chr22,chr22,chr22,chr22	+,-,+,+	GGT1,C22orf36,GGT1,GGT1	-5353,-15447,-907,-5409
chr2:91961132-91961426	chr2	+	91961264	91961464	True	NR_003503,NR_027238	chr2,chr2	+,-	GGT8P,LOC654342	1903,-113289
chr14:21977404-21977789	chr14	+	21977492	21977618	True	NM_014828,NM_019852	chr14,chr14	+,-	TOX4,METTL3	-32215,1891
chr1:32663761-32665119	chr1	+	32663986	32664963	True	NM_001160042,NM_018134,NM_001099434,NM_024296,NM_019118	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	IQCC,IQCC,DCDC2B,CCDC28B,TMEM234	6272,6272,9731,1238,23014
chr20:35801198-35803025	chr20	+	35801588	35802867	True	NM_152503,NM_001135771,NM_213632,NM_002951,NM_213631	chr20,chr20,chr20,chr20,chr20	-,+,-,+,-	C20orf132,RPN2,C20orf132,RPN2,C20orf132	5167,4588,5167,4588,5167
chr12:56103999-56105979	chr12	+	56104909	56106013	True	NM_002905,NM_002206,NM_001144996,NM_001144997,NR_037656,NR_037655,NR_037657,NM_001487,NR_037658,NM_001199771	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,-,-,-,+,+,+,+,+,+	RDH5,ITGA7,ITGA7,ITGA7,BLOC1S1,BLOC1S1,BLOC1S1,BLOC1S1,BLOC1S1-RDH5,RDH5	8137,-3223,-3223,126,4062,3804,4062,3804,3804,8137
chr16:2030370-2030707	chr16	+	2030526	2030696	True	NM_005262,NM_144603,NM_172167,NM_006453,NM_172168,NM_004209	chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,+,-,+	GFER,NOXO1,NOXO1,TBL3,NOXO1,SYNGR3	3453,794,538,-8513,538,9249
chr5:34038643-34038965	chr5	+	34038643	34039011	True	NM_030945,NM_016568,NM_181435	chr5,chr5,chr5	-,+,-	C1QTNF3,RXFP3,C1QTNF3	4410,-102208,4410
chr5:13949169-13950516	chr5	+	13949208	13950316	True	NM_007118,NM_001369	chr5,chr5	+,-	TRIO,DNAH5	193512,-4619
chr11:50258372-50259065	chr11	+	50258433	50259018	True	NR_024504,NR_003034	chr11,chr11	+,-	LOC646813,LOC441601	109299,-800
chr9:21027853-21029809	chr9	+	21028228	21029604	True	NR_030166,NM_001010915	chr9,chr9	+,-	MIR491,PTPLAD2	-312176,2087
chr3:46902796-46903209	chr3	+	46902868	46903226	True	NM_000316,NM_000258	chr3,chr3	+,-	PTH1R,MYL3	16009,1797
chr9:4742894-4744227	chr9	+	4743361	4744283	True	NM_001199855,NM_001199854,NM_005772,NM_001199853,NM_001199852,NM_016282	chr9,chr9,chr9,chr9,chr9,chr9	-,-,+,-,-,-	AK3,AK3,RCL1,AK3,AK3,AK3	-1562,-2208,48550,-1318,-2052,-2052
chrX:67723719-67725106	chrX	+	67724035	67724887	True	NM_173834,NM_002547,NM_001195214	chrX,chrX,chrX	+,-,+	YIPF6,OPHN1,YIPF6	-5462,-70736,-5462
chr5:43043429-43044571	chr5	+	43043440	43044516	True	NM_001014279,NR_015447	chr5,chr5	-,+	C5orf39,LOC153684	-2993,-1255
chr19:52599010-52600100	chr19	+	52599278	52600004	True	NM_014225,NM_001136499	chr19,chr19	+,-	PPP2R1A,ZNF841	93050,-260
chr5:150040067-150041067	chr5	+	150040263	150040961	True	NM_001122853,NM_018047,NM_133371	chr5,chr5,chr5	+,-,+	MYOZ3,RBM22,MYOZ3	90,39758,90
chr17:4852709-4852986	chr17	+	4852778	4852892	True	NM_001165418,NM_053013,NM_005022,NM_001165417,NM_003562,NM_001976,NM_001193503,NM_015528	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,-,-,-,+,+,+	SLC25A11,ENO3,PFN1,SLC25A11,SLC25A11,ENO3,ENO3,RNF167	-9316,1491,-953,-9316,-9316,1491,1491,-9199
chr10:121622575-121623095	chr10	+	121622685	121622971	True	NM_024834,NM_007190	chr10,chr10	-,+	MCMBP,SEC23IP	9475,29113
chr1:85355865-85356707	chr1	+	85356081	85356727	True	NM_145172,NM_012152	chr1,chr1	+,-	WDR63,LPAR3	171265,2229
chr15:22954602-22955361	chr15	+	22954606	22955272	True	NM_001033028,NM_001008860	chr15,chr15	+,-	CYFIP1,NIPA2	482,79205
chr10:88824972-88825859	chr10	+	88825193	88825878	True	NM_005271,NM_019054	chr10,chr10	-,+	GLUD1,FAM35A	28949,29074
chr1:12706828-12708282	chr1	+	12706877	12708335	True	NM_001013630,NM_004753	chr1,chr1	+,-	AADACL4,DHRS3	-2362,-29057
chr19:1019416-1019789	chr19	+	1019440	1019782	True	NM_004368,NM_033420,NM_001033026,NM_201277	chr19,chr19,chr19,chr19	+,-,-,+	CNN2,C19orf6,C19orf6,CNN2	6515,1409,1409,6515
chr1:150575324-150575803	chr1	+	150575739	150575845	True	NM_182763,NR_036211	chr1,chr1	-,+	MCL1,MIR4257	-23525,-51385
chr5:131706064-131706762	chr5	+	131706083	131706620	True	NM_003060,NR_037500,NR_037898	chr5,chr5,chr5	+,-,-	SLC22A5,MIR3936,LOC553103	-733,-4792,-475
chr2:228571409-228572270	chr2	+	228571507	228571985	True	NM_001130046,NM_025243	chr2,chr2	+,-	CCL20,SLC19A3	106572,10810
chr1:200381234-200382984	chr1	+	200381505	200381986	True	NM_001105517,NM_012482	chr1,chr1	+,-	FAM58B,ZNF281	-198906,-2339
chr2:55662791-55663640	chr2	+	55662820	55663409	True	NM_080667,NM_018084	chr2,chr2	+,-	CCDC104,CCDC88A	83330,-15763
chr6:84136842-84137450	chr6	+	84136975	84137423	True	NM_002395,NM_001170423	chr6,chr6	-,+	ME1,PRSS35	3577,84770
chr1:179012325-179013083	chr1	+	179012372	179013092	True	NM_014864,NM_001136000	chr1,chr1	+,-	FAM20B,ABL2	-17349,99182
chr12:85809036-85809471	chr12	+	85809255	85809405	True	NM_001100917,NM_006982	chr12,chr12	-,+	TSPAN19,ALX1	-379200,-135275
chr11:101917465-101918008	chr11	+	101917589	101917923	True	NM_178127,NM_032930,NM_001195005	chr11,chr11,chr11	-,+,+	ANGPTL5,C11orf70,C11orf70	-130336,245,245
chr13:28712429-28712646	chr13	+	28712522	28712695	True	NR_029383,NM_175854	chr13,chr13	-,+	LOC100288730,PAN3	666,50
chr19:13068090-13068471	chr19	+	13068161	13068303	True	NM_005053,NM_052850	chr19,chr19	+,-	RAD23A,GADD45GIP1	-11558,-111
chr5:178420814-178421022	chr5	+	178420999	178421071	True	NM_001136116,NM_000843	chr5,chr5	+,-	ZNF879,GRM6	29704,1103
chr16:56226094-56226300	chr16	+	56226166	56226286	True	NM_020988,NR_026889,NR_027078,NM_138736	chr16,chr16,chr16,chr16	+,-,-,+	GNAO1,DKFZP434H168,LOC283856,GNAO1	-966,2201,-1160,-966
chr3:109054433-109054747	chr3	+	109054601	109054682	True	NM_018189,NM_001145553	chr3,chr3	-,+	DPPA4,FLJ25363	1790,74154
chr1:9191384-9193246	chr1	+	9191695	9193223	True	NM_004285,NM_024980	chr1,chr1	+,-	H6PD,GPR157	101639,-2466
chr1:159157575-159158033	chr1	+	159157579	159158011	True	NM_002036,NR_037870	chr1,chr1	+,-	DARC,LOC100131825	15791,14251
chr3:196694372-196694910	chr3	+	196694602	196694928	True	NR_024388,NM_025163	chr3,chr3	+,-	LOC152217,PIGZ	-25159,826
chr19:47760793-47761236	chr19	+	47760955	47761255	True	NM_015603,NM_001127242	chr19,chr19	+,-	CCDC9,BBC3	-1275,-24932
chrY:9548844-9550320	chrY	+	9549144	9550190	True	NR_003591,NR_001535,NR_001534,NR_003588,NR_003592	chrY,chrY,chrY,chrY,chrY	+,-,-,-,-	TTTY8B,TTTY21,TTTY7,TTTY21B,TTTY7B	-20486,8765,2731,8765,2731
chrY:9548844-9550320	chrY	-	6320189	6321235	False	NR_001533,NR_001535,NR_001534,NR_003588,NR_003592	chrY,chrY,chrY,chrY,chrY	-,+,+,+,+	TTTY8,TTTY21,TTTY7,TTTY21B,TTTY7B	20486,-8765,-2731,-8765,-2731
chr2:91762596-91762960	chr2	+	91762624	91762932	True	NR_003503,NR_027238	chr2,chr2	+,-	GGT8P,LOC654342	200435,85093
chr16:84274760-84275852	chr16	+	84274854	84275737	True	NM_139174,NM_172347	chr16,chr16	+,-	ADAD2,KCNG4	-50183,-1498
chr13:27840966-27842701	chr13	+	27840965	27842668	True	NM_182488,NM_206827	chr13,chr13	-,+	USP12,RASL11A	-94932,1795
chr2:128453959-128455141	chr2	+	128454084	128454908	True	NM_032740,NM_001161404	chr2,chr2	+,-	SFT2D3,LIMS2	3688,-14724
chr9:92089976-92090934	chr9	+	92090399	92090983	True	NM_006378,NM_006705,NM_001142287	chr9,chr9,chr9	-,+,-	SEMA4D,GADD45G,SEMA4D	3678,128943,3678
chr17:40831930-40832192	chr17	+	40831946	40832204	True	NM_016602,NM_024927,NM_003632	chr17,chr17,chr17	-,-,+	CCR10,PLEKHH3,CNTNAP1	1691,-2898,2427
chr9:71391700-71392325	chr9	+	71391739	71392208	True	NM_153237,NM_138333	chr9,chr9	-,+	C9orf71,FAM122A	-235956,2755
chr17:50237130-50238062	chr17	+	50237232	50237894	True	NM_001082534,NM_020178,NM_001082533,NM_016001	chr17,chr17,chr17,chr17	-,-,-,+	CA10,CA10,CA10,UTP18	35,-1100,-71,-899386
chr19:44077130-44078676	chr19	+	44077457	44078215	True	NM_001193621,NM_001193622,NM_006297	chr19,chr19,chr19	+,+,-	LOC390940,LOC390940,XRCC1	2736,6480,1565
chr2:178261983-178262799	chr2	+	178261997	178262847	True	NM_003659,NR_026966	chr2,chr2	+,-	AGPS,LOC100130691	-4585,-4578
chr1:12185079-12185369	chr1	+	12185155	12185343	True	NM_152942,NM_138346	chr1,chr1	+,-	TNFRSF8,KIAA2013	614,-198670
chr14:95786665-95786904	chr14	+	95786859	95786933	True	NR_015415,NM_024734	chr14,chr14	+,-	FLJ45244,CLMN	-162885,-614
chr1:100645528-100646192	chr1	+	100645590	100646034	True	NM_144620,NM_019083	chr1,chr1	-,+	LRRC39,CCDC76	-1819,-46948
chr4:99180305-99181391	chr4	+	99180578	99181369	True	NM_021159,NM_174952,NM_001100428,NM_001100429,NM_001100430,NM_001100426,NM_001100427	chr4,chr4,chr4,chr4,chr4,chr4,chr4	+,-,+,+,+,+,+	RAP1GDS1,C4orf37,RAP1GDS1,RAP1GDS1,RAP1GDS1,RAP1GDS1,RAP1GDS1	1157,-116187,1157,1157,1157,1157,1157
chr15:23157001-23157927	chr15	+	23157186	23157576	True	NR_024074,NR_003521	chr15,chr15	+,-	GOLGA8IP,WHAMML1	97665,50831
chr15:23157001-23157927	chr15	-	29035270	29035320	False	NR_036475,NR_033351,NR_037599	chr15,chr15,chr15	+,-,+	LOC100289656,GOLGA8F,LOC646278	-1932,-257127,-341
chr7:72300206-72300471	chr7	+	72300264	72300510	True	NR_001588,NR_024110,NR_024111,NR_024109,NM_001145441,NM_001145440	chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,-,-	SBDSP1,SBDSP1,SBDSP1,SBDSP1,TYW1B,TYW1B	-363,-363,-363,-363,-1451,-1451
chr1:46216607-46217042	chr1	+	46216634	46216891	True	NM_005897,NM_015112,NM_001145349	chr1,chr1,chr1	-,+,-	IPP,MAST2,IPP	-149,52393,-149
chr20:44747796-44748801	chr20	+	44748031	44748781	True	NM_152854,NM_001250,NM_020967	chr20,chr20,chr20	+,+,-	CD40,CD40,NCOA5	-1176,-1176,-29451
chr1:155210604-155211038	chr1	+	155210986	155211080	True	NM_000157,NM_001171812,NM_001171811,NM_198883,NM_001005742,NM_001005741	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,-	GBA,GBA,GBA,MTX1,GBA,GBA	39,36,3623,-32547,3623,3623
chr1:203149904-203150470	chr1	+	203149986	203150418	True	NM_001276,NM_004997,NM_001048230	chr1,chr1,chr1	-,-,+	CHI3L1,MYBPH,ADORA1	5554,-5044,-53201
chr22:31090106-31090431	chr22	+	31090110	31090431	True	NM_152511,NM_030758	chr22,chr22	-,+	DUSP18,OSBP2	-26238,361
chr7:141414019-141415430	chr7	+	141414091	141415467	True	NM_001105558,NM_001080392	chr7,chr7	+,-	WEE2,KIAA1147	-5989,-12138
chr2:235862085-235862656	chr2	+	235862264	235862680	True	NM_014521,NM_005737	chr2,chr2	+,-	SH3BP4,ARL4C	-1688,-456571
chr5:178317929-178319637	chr5	+	178318351	178319505	True	NM_000843,NM_030613	chr5,chr5	-,+	GRM6,ZFP2	102677,3410
chr16:75283548-75284118	chr16	+	75283650	75284028	True	NM_001170719,NM_001906,NM_001170717,NM_014567	chr16,chr16,chr16,chr16	-,+,-,-	BCAR1,CTRB1,BCAR1,BCAR1	-1426,-30817,1548,1548
chr1:156263291-156263819	chr1	+	156263380	156263854	True	NM_144580,NM_032323,NM_001004319	chr1,chr1,chr1	-,+,-	C1orf85,TMEM79,VHLL	1645,-9361,5624
chr19:14531620-14531885	chr19	+	14531720	14531780	True	NM_001204057,NM_005804,NM_002741	chr19,chr19,chr19	-,-,+	DDX39A,DDX39A,PKN1	-1814,-1525,12385
chr1:187347323-187349077	chr1	+	187347325	187349126	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-697766,-549346
chr16:67196898-67197136	chr16	+	67196904	67197158	True	NM_001040667,NM_001538,NM_003789,NM_018378,NM_001185058	chr16,chr16,chr16,chr16,chr16	+,+,-,+,+	HSF4,HSF4,TRADD,FBXL8,NOL3	129,129,-3092,-3064,7246
chr8:143481821-143483444	chr8	+	143482076	143483444	True	NM_145003,NM_001702	chr8,chr8	-,+	TSNARE1,BAI1	1149,61932
chr15:78912077-78912334	chr15	+	78912134	78912318	True	NM_001166694,NM_000743,NM_000745	chr15,chr15,chr15	-,-,+	CHRNA3,CHRNA3,CHRNA5	1369,1369,-54324
chr15:44115327-44115665	chr15	+	44115512	44115583	True	NM_005926,NM_001167941,NM_024908	chr15,chr15,chr15	-,+,+	MFAP1,WDR76,WDR76	1425,3528,3528
chr12:75587171-75587530	chr12	+	75587184	75587431	True	NM_152779,NM_139136	chr12,chr12	+,-	GLIPR1L1,KCNC2	141031,16137
chr13:25086603-25086866	chr13	+	25086674	25086878	True	NM_006437,NR_002815	chr13,chr13	-,+	PARP4,LOC374491	120,67467
chrX:55026178-55026519	chrX	+	55026183	55026549	True	NM_002625,NM_014481	chrX,chrX	-,+	PFKFB1,APEX2	-5672,230
chr4:177144222-177145544	chr4	+	177144308	177145364	True	NM_144644,NM_021928	chr4,chr4	-,+	SPATA4,SPCS3	-27486,95725
chr17:37819341-37819851	chr17	+	37819370	37819808	True	NM_002686,NM_003673,NM_033419	chr17,chr17,chr17	+,+,-	PNMT,TCAP,PGAP3	4698,1790,24552
chr6:14855297-14856531	chr6	+	14855309	14856438	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	390088,806908
chr3:8540508-8542436	chr3	+	8540533	8542272	True	NM_014583,NR_033378	chr3,chr3	+,-	LMCD1,LOC100288428	1238,1122
chr6:127771488-127772742	chr6	+	127771687	127772715	True	NM_014702,NM_001010905	chr6,chr6	-,+	KIAA0408,C6orf58	7870,125603
chr11:57433528-57433757	chr11	+	57433616	57433680	True	NM_145008,NM_015457,NM_001142597,NM_006831	chr11,chr11,chr11,chr11	-,+,+,+	YPEL4,ZDHHC5,CLP1,CLP1	-16199,1793,-8456,-8456
chr1:15944824-15945706	chr1	+	15944867	15945559	True	NM_032341,NM_024758	chr1,chr1	+,-	DDI2,AGMAT	-970,-33262
chr11:130298542-130298948	chr11	+	130298542	130298935	True	NM_007037,NM_139055	chr11,chr11	-,+	ADAMTS8,ADAMTS15	-3,19933
chr1:48697042-48698157	chr1	+	48697220	48698178	True	NR_026749,NM_001011547,NM_001135181	chr1,chr1,chr1	-,+,+	SKINTL,SLC5A9,SLC5A9	-49120,-8914,-8914
chrX:48958829-48959355	chrX	+	48958938	48959328	True	NM_001163323,NM_007075	chrX,chrX	+,-	CCDC120,WDR45	-42466,-879
chr2:131485587-131486346	chr2	+	131485700	131486380	True	NM_207364,NM_001079530	chr2,chr2	+,-	GPR148,CFC1B	262,-128449
chr5:165808454-165808931	chr5	+	165808595	165808896	True	NM_001122679,NR_029520	chr5,chr5	+,-	ODZ2,MIR103-1	902946,2179145
chr12:7038440-7039364	chr12	+	7038459	7039406	True	NM_001940,NM_001007026,NR_003010	chr12,chr12,chr12	+,+,-	ATN1,ATN1,SCARNA12	-1030,-4884,37413
chr15:74374664-74375104	chr15	+	74374752	74374820	True	NM_001130136,NM_001038640	chr15,chr15	+,-	ISLR2,GOLGA6A	46894,125
chr15:74374664-74375104	chr15	-	72947108	72947176	False	NR_002780,NM_018652	chr15,chr15	-,+	HIGD2B,GOLGA6B	31372,-127
chr15:74374664-74375104	chr15	-	75550969	75551037	False	NR_030360,NM_001164404	chr15,chr15	-,+	MIR631,GOLGA6C	95047,-127
chr15:74374664-74375104	chr15	-	75575246	75575314	False	NR_030360,NM_001145224	chr15,chr15	-,+	MIR631,GOLGA6D	70770,-121
chr1:71513450-71513677	chr1	+	71513468	71513640	True	NR_028294,NR_028293,NR_028292,NM_001126044,NM_153742,NM_198719,NM_198718,NM_198715,NM_198714,NM_198717,NM_198716	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,+,-,-,-,-,-,-	PTGER3,PTGER3,PTGER3,PTGER3,CTH,PTGER3,PTGER3,PTGER3,PTGER3,PTGER3,PTGER3	23,23,23,23,-636618,23,23,23,23,23,23
chr6:12013199-12013785	chr6	+	12013594	12013824	True	NM_032744,NM_002114	chr6,chr6	-,+	C6orf105,HIVEP1	-234314,-924
chr5:101833924-101834313	chr5	+	101834011	101834345	True	NM_000919,NM_173488	chr5,chr5	+,-	PAM,SLCO6A1	367181,425
chr11:30039966-30040221	chr11	+	30039965	30040270	True	NM_002233,NM_000510	chr11,chr11	-,+	KCNA4,FSHB	-1388,212292
chr13:45488499-45489669	chr13	+	45488656	45489709	True	NM_012345,NM_018559	chr13,chr13	-,+	NUFIP1,KIAA1704	73954,73977
chr11:64809011-64809214	chr11	+	64809013	64809203	True	NM_005468,NM_013299	chr11,chr11	-,+	NAALADL1,SAC3D1	16856,-688
chr21:45430469-45431806	chr21	+	45430663	45431714	True	NR_026961,NM_003274	chr21,chr21	-,+	LOC284837,TRAPPC10	-198215,491
chr6:26399364-26400472	chr6	+	26399423	26400196	True	NM_194441,NM_001145009,NM_001145008,NM_003543,NM_007048	chr6,chr6,chr6,chr6,chr6	+,+,+,-,+	BTN3A1,BTN3A1,BTN3A1,HIST1H4H,BTN3A1	2268,2268,2268,-113696,2268
chr17:21279054-21279388	chr17	+	21279099	21279293	True	NM_152914,NM_021012	chr17,chr17	-,+	C17orf103,KCNJ12	-122521,405
chr1:17765797-17766060	chr1	+	17765847	17766073	True	NM_001136204,NM_018715,NM_207421	chr1,chr1,chr1	-,-,+	RCC2,RCC2,PADI6	-790,197,-67157
chr11:63743869-63744095	chr11	+	63743880	63744056	True	NM_017670,NM_004074,NM_173587,NR_003089	chr11,chr11,chr11,chr11	+,+,-,+	OTUB1,COX8A,RCOR2,OTUB1	9268,-1855,-59564,9268
chr2:159328841-159330005	chr2	+	159329156	159329403	True	NM_001171637,NM_003628	chr2,chr2	-,+	CCDC148,PKP4	-15891,-15742
chr10:60965458-60967150	chr10	+	60965636	60966789	True	NM_001001971,NM_001143774	chr10,chr10	-,+	FAM13C,PHYHIPL	155622,-28468
chr3:42850576-42852472	chr3	+	42850730	42852213	True	NM_001296,NM_001099669,NM_001099668,NM_014056	chr3,chr3,chr3,chr3	+,-,-,-	CCBP2,HIGD1A,HIGD1A,HIGD1A	-53,-4703,-4796,-4703
chr20:38827130-38828722	chr20	+	38827387	38828582	True	NM_003286,NM_005461	chr20,chr20	+,-	TOP1,MAFB	828879,489351
chr17:48845171-48845511	chr17	+	48845477	48845559	True	NR_024626,NM_016424	chr17,chr17	-,+	C17orf73,LUC7L3	-559,-48602
chr6:42162788-42163925	chr6	+	42163156	42163685	True	NM_000409,NM_002098	chr6,chr6	+,-	GUCA1A,GUCA1B	-40063,-462
chr2:219031083-219031638	chr2	+	219031234	219031674	True	NM_000634,NM_001557	chr2,chr2	-,+	CXCR1,CXCR2	92,-40549
chrX:52841388-52842746	chrX	+	52841637	52842685	True	NM_130775,NM_001009616	chrX,chrX	+,-	XAGE5,SPANXN5	-460,-15249
chr1:154540983-154541209	chr1	+	154541055	154541157	True	NM_000748,NM_017582	chr1,chr1	+,-	CHRNB2,UBE2Q1	-849,-9935
chr17:34990372-34990719	chr17	+	34990409	34990767	True	NM_024864,NM_001033580	chr17,chr17	+,-	MRM1,MYO19	-32435,-99104
chr16:1304924-1306198	chr16	+	1305322	1306112	True	NM_024164,NM_012217	chr16,chr16	-,+	TPSB2,TPSD1	-25137,160
chr17:41561089-41561325	chr17	+	41561160	41561290	True	NM_001986,NM_004941	chr17,chr17	-,+	ETV4,DHX8	62073,43
chr6:167372143-167374103	chr6	+	167372447	167373840	True	NM_003730,NM_007045	chr6,chr6	-,+	RNASET2,FGFR1OP	-2370,38975
chr10:123355266-123355592	chr10	+	123355324	123355636	True	NM_000141,NM_022970,NM_001144916,NM_001144917,NM_001144914,NM_001144915,NM_206861,NM_001144913,NM_001144918,NM_001144919	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,-,-,+,-,-,-	FGFR2,FGFR2,FGFR2,FGFR2,FGFR2,FGFR2,TACC2,FGFR2,FGFR2,FGFR2	2386,2386,-1552,2386,-1843,573,393052,-1843,2386,2386
chr16:51184058-51184396	chr16	+	51184183	51184429	True	NM_001127892,NM_001042412,NM_002968	chr16,chr16,chr16	-,+,-	SALL1,CYLD,SALL1	129,-408205,804
chr5:176074876-176075085	chr5	+	176074923	176075125	True	NM_003085,NM_130465,NM_012171,NM_001006616	chr5,chr5,chr5,chr5	-,+,+,+	SNCB,TSPAN17,TSPAN17,TSPAN17	-17366,-586,-586,-586
chr17:46800743-46800944	chr17	+	46800762	46800990	True	NR_036150,NR_024103,NM_032391,NM_006361	chr17,chr17,chr17,chr17	-,+,-,-	MIR3185,NCRNA00253,PRAC,HOXB13	897,-279,-880,5171
chr18:31254741-31256110	chr18	+	31255018	31255824	True	NM_030632,NM_198995	chr18,chr18	+,-	ASXL3,C18orf34	-96535,-234333
chr2:223288329-223288971	chr2	+	223288355	223288884	True	NM_013942,NM_152386	chr2,chr2	-,+	PAX3,SGPP2	-124640,437
chr2:220117769-220117984	chr2	+	220117791	220118019	True	NM_006000,NR_003063,NR_026909,NM_024506,NM_001008910	chr2,chr2,chr2,chr2,chr2	-,+,+,-,+	TUBA4A,TUBA4B,STK16,GLB1L,STK16	669,-55,-7641,-7660,-7650
chr22:38669207-38669549	chr22	+	38669251	38669589	True	NM_012264,NM_001195072,NM_001195071,NM_001161573	chr22,chr22,chr22,chr22	-,-,-,+	TMEM184B,TMEM184B,TMEM184B,MAFF	-211,-211,-581,-70275
chr17:39644898-39645399	chr17	+	39644897	39645405	True	NM_005801,NM_003771,NM_002280	chr17,chr17,chr17	+,-,-	EIF1,KRT36,KRT35	199721,761,-7505
chr1:229736482-229737389	chr1	+	229736493	229737326	True	NM_014409,NM_014777	chr1,chr1	-,+	TAF5L,URB2	24519,24654
chr20:48346024-48346886	chr20	+	48346254	48346754	True	NM_015266,NM_004776	chr20,chr20	+,-	SLC9A8,B4GALT5	82495,-15833
chrX:151807933-151808807	chrX	+	151807977	151808759	True	NM_001129826,NM_018558	chrX,chrX	-,+	CSAG3,GABRQ	68961,-1391
chr18:3812091-3812727	chr18	+	3812090	3812762	True	NR_024101,NM_001003809	chr18,chr18	+,-	FLJ35776,DLGAP1	-218030,32592
chr17:79284128-79284357	chr17	+	79284131	79284349	True	NM_178519,NR_038080,NM_001086521	chr17,chr17,chr17	-,-,+	C17orf55,C17orf55,C17orf89	-1083,-1083,-71071
chr17:27335346-27335889	chr17	+	27335366	27335924	True	NM_001098635,NM_178860,NM_016518	chr17,chr17,chr17	-,-,+	SEZ6,SEZ6,PIPOX	-2285,-2285,33993
chr10:70586386-70587129	chr10	+	70586551	70587169	True	NM_152709,NM_001130159,NM_001130161,NM_001130162,NM_152707,NM_001130160	chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,-,+	STOX1,STOX1,STOX1,STOX1,SLC25A16,STOX1	124,124,124,393,-299271,124
chr1:150774608-150776535	chr1	+	150775558	150776522	True	NM_000396,NM_001145415	chr1,chr1	-,+	CTSK,SETDB1	4445,122292
chr6:14938698-14940430	chr6	+	14938878	14940212	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	306314,723139
chr17:48226188-48226425	chr17	+	48226193	48226441	True	NM_032595,NM_000023	chr17,chr17	-,+	PPP1R9B,SGCA	1486,16924
chr20:6017305-6017773	chr20	+	6017367	6017816	True	NM_001127458,NM_152611	chr20,chr20	+,-	CRLS1,LRRN4	-29520,16935
chr9:35962237-35963152	chr9	+	35962334	35963196	True	NR_024283,NM_019897	chr9,chr9	+,-	LOC158376,OR2S2	-52905,-4183
chr3:45018712-45019277	chr3	+	45018718	45019314	True	NM_015004,NR_023353,NM_016598,NM_001135179	chr3,chr3,chr3,chr3	+,+,-,-	EXOSC7,EXOSC7,ZDHHC3,ZDHHC3	-1028,-1028,-1044,-1044
chr14:64938163-64938741	chr14	+	64938163	64938702	True	NM_006977,NM_004857	chr14,chr14	-,+	ZBTB25,AKAP5	31915,-6004
chr5:177103984-177105538	chr5	+	177104280	177105383	True	NR_026921,NM_007255	chr5,chr5	-,+	LOC202181,B4GALT7	-5002,-77212
chr5:177103984-177105538	chr5	-	175659838	175660369	False	NR_036494,NM_198567	chr5,chr5	-,+	LOC643201,C5orf25	-33540,5000
chr2:97566520-97567068	chr2	+	97566533	97566905	True	NM_001172667,NM_199078,NM_016490	chr2,chr2,chr2	-,+,-	FAM178B,CNNM3,FAM178B	-5634,-84593,-2663
chr16:329897-330154	chr16	+	330057	330127	True	NM_183337,NM_006849,NM_001176,NM_003834	chr16,chr16,chr16,chr16	-,+,+,-	RGS11,PDIA2,ARHGDIG,RGS11	-4143,2990,478,-4143
chrX:11231286-11233019	chrX	+	11231476	11232889	True	NM_001142,NM_013423	chrX,chrX	+,-	AMELX,ARHGAP6	78643,51256
chr1:156739685-156740432	chr1	+	156739887	156740171	True	NM_001126050,NM_005973	chr1,chr1	-,+	HDGF,PRCC	-17647,-2665
chr9:141044176-141044405	chr18	-	73626	74020	False	NM_005131,NR_033770	chr18,chr18	-,+	THOC1,ROCK1P1	194417,35044
chr9:141044176-141044405	chr9	+	141044363	141044445	True	NM_032937,NR_027156	chr9,chr9	-,+	C9orf37,TUBBP5	-531055,119
chr11:85955455-85955991	chr11	+	85955454	85955992	True	NM_152991,NM_003797,NM_007166	chr11,chr11,chr11	+,+,-	EED,EED,PICALM	56,56,-175346
chr2:88123699-88124247	chr2	+	88123991	88124243	True	NM_001078170,NM_001032392	chr2,chr2	-,+	RGPD2,PLGLB1	1093,-76432
chr2:88123699-88124247	chr2	-	87141686	87172364	False	NM_004931,NM_001024457	chr2,chr2	-,+	CD8B,RGPD1	-52639,-27627
chr2:88123699-88124247	chr2	-	87172507	87172565	False	NM_001032392,NM_001024457	chr2,chr2	-,+	PLGLB1,RGPD1	76454,-27822
chr7:72425401-72425786	chr7	+	72425442	72425593	True	NR_033323,NR_003602	chr7,chr7	-,+	NSUN5P2,LOC541473	-140,14598
chr7:72425401-72425786	chr7	-	75039313	75039464	False	NR_003614,NR_033322	chr7,chr7	-,+	PMS2L2,NSUN5P1	-51098,159
chr6:45325269-45326112	chr6	+	45325551	45326165	True	NM_003599,NM_001024630	chr6,chr6	-,+	SUPT3H,RUNX2	19468,-29564
chr3:66310013-66310506	chr3	+	66310081	66310543	True	NR_028475,NM_015541	chr3,chr3	+,-	SLC25A26,LRIG1	-38964,240352
chr19:35223873-35224321	chr19	+	35223884	35224370	True	NM_001029997,NM_001007248,NM_001145665	chr19,chr19,chr19	+,-,+	ZNF181,ZNF599,ZNF181	1109,39814,1109
chr3:195282505-195282758	chr3	+	195282504	195282570	True	NR_003265,NM_006241	chr3,chr3	+,-	SDHAP2,PPP1R2	102339,-12280
chr1:244517816-244518780	chr1	+	244518037	244518651	True	NM_001012970,NM_001126	chr1,chr1	+,-	C1orf100,ADSS	-2159,96839
chr22:19133908-19134154	chr22	+	19133933	19134097	True	NM_005315,NM_053006,NM_022719	chr22,chr22,chr22	-,+,-	GSC2,TSSK2,DGCR14	3749,-15663,-1743
chr5:175842312-175842719	chr5	+	175842347	175842719	True	NM_001834,NM_007097,NM_138820	chr5,chr5,chr5	-,-,+	CLTB,CLTB,HIGD2A	871,871,-26614
chr7:38217999-38218261	chr7	+	38218043	38218307	True	NM_001003799,NM_032016	chr7,chr7	-,+	TARP,STARD3NL	94991,-161
chr8:48925200-48925564	chr8	+	48925339	48925414	True	NM_003350,NM_006904	chr8,chr8	+,-	UBE2V2,PRKDC	-4403,-52596
chr18:14131421-14132136	chr18	+	14131431	14131951	True	NR_033354,NR_026756,NM_145287	chr18,chr18,chr18	-,+,-	ZNF519,LOC284233,ZNF519	588,205470,588
chr18:14131421-14132136	chr21	-	15400425	15400762	False	NR_027270,NM_144770	chr21,chr21	-,+	C21orf81,RBM11	-47660,187703
chr2:85582039-85582290	chr2	+	85582064	85582298	True	NM_001135022,NM_001135023,NM_001135021,NM_032213,NM_017750	chr2,chr2,chr2,chr2,chr2	+,+,+,+,-	ELMOD3,ELMOD3,ELMOD3,ELMOD3,RETSAT	-272,-272,-272,-272,-243
chr15:89165449-89165834	chr15	+	89165478	89165746	True	NM_022767,NR_026645	chr15,chr15	+,-	AEN,DET1	-1004,-75566
chr22:27021609-27022290	chr22	+	27021626	27022004	True	NM_001886,NM_001887	chr22,chr22	+,-	CRYBA4,CRYBB1	-3749,-7635
chr6:32007148-32007545	chr6_mcf_hap5	+	3387126	3387192	False	NM_001128590,NM_000500,NM_032470	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	+,+,-	CYP21A2,CYP21A2,TNXB	-1239,-1239,6604
chr6:32007148-32007545	chr6_dbb_hap3	+	3286501	3286567	False	NM_001128590,NM_000500,NM_032470	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	+,+,-	CYP21A2,CYP21A2,TNXB	-1243,-1243,6605
chr6:32007148-32007545	chr6	+	32007285	32007351	True	NM_001128590,NM_000500,NM_032470	chr6,chr6,chr6	+,+,-	CYP21A2,CYP21A2,TNXB	-1243,-1243,6604
chr6:32007148-32007545	chr6_ssto_hap7	+	3339993	3340059	False	NM_001002029,NM_032470	chr6_ssto_hap7,chr6_ssto_hap7	+,-	C4B,TNXB	-24762,6604
chr6:32007148-32007545	chr6_cox_hap2	+	3477936	3478002	False	NR_001284,NM_001128590,NM_000500,NM_032470	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	-,+,+,-	TNXA,CYP21A2,CYP21A2,TNXB	6353,-1243,-1243,6604
chr7:103087456-103088197	chr7	+	103087494	103088230	True	NM_206885,NM_206884,NM_206883,NM_002803,NM_198999,NM_001167962	chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,+,-,-	SLC26A5,SLC26A5,SLC26A5,PSMC2,SLC26A5,SLC26A5	-870,-870,-870,-99585,-870,-870
chr7:66827977-66828820	chr7	+	66828061	66828509	True	NM_022906,NR_022007	chr7,chr7	+,-	STAG3L4,PMS2P4	-60505,-60655
chr21:42542546-42543121	chr21	+	42542583	42543131	True	NM_182832,NM_138991,NR_036167,NM_012105,NM_138992	chr21,chr21,chr21,chr21,chr21	-,+,+,+,+	PLAC4,BACE2,MIR3197,BACE2,BACE2	14085,-2906,-3150,-2906,-2906
chr6:30907644-30908785	chr6_qbl_hap6	+	2200692	2201252	False	NM_205854,NM_080870	chr6_qbl_hap6,chr6_qbl_hap6	-,+	SFTA2,DPCR1	-7769,497
chr6:30907644-30908785	chr6_mcf_hap5	+	2289660	2290220	False	NM_205854,NM_080870	chr6_mcf_hap5,chr6_mcf_hap5	-,+	SFTA2,DPCR1	-7769,497
chr6:30907644-30908785	chr6_cox_hap2	+	2419632	2420192	False	NM_205854,NM_080870	chr6_cox_hap2,chr6_cox_hap2	-,+	SFTA2,DPCR1	-7757,497
chr6:30907644-30908785	chr6	+	30907719	30908279	True	NM_205854,NM_080870	chr6,chr6	-,+	SFTA2,DPCR1	-7767,497
chr6:30907644-30908785	chr6_dbb_hap3	+	2201835	2202359	False	NM_205854,NM_080870	chr6_dbb_hap3,chr6_dbb_hap3	-,+	SFTA2,DPCR1	-7773,533
chr9:139839402-139839852	chr9	+	139839450	139839583	True	NM_000606,NM_018998,NM_178536	chr9,chr9,chr9	+,-,+	C8G,FBXW5,LCN12	114,-277,7184
chr17:37617240-37617574	chr17	+	37617457	37617623	True	NM_004774,NM_016507,NM_015083	chr17,chr17,chr17	-,+,+	MED1,CDK12,CDK12	-9930,115,115
chr17:17591721-17591976	chr17	+	17591842	17591906	True	NM_030665,NR_024007	chr17,chr17	+,-	RAI1,SMCR5	-7106,90987
chr6:97267774-97268114	chr6	+	97267884	97268160	True	NM_052904,NM_001143957	chr6,chr6	+,-	KLHL32,GPR63	104335,17243
chr2:101092524-101093154	chr2	+	101092523	101093185	True	NM_004854,NM_001011717	chr2,chr2	-,+	CHST10,NMS	-58393,-5634
chrX:105945421-105947008	chrX	+	105945698	105947049	True	NM_024539,NM_001171706	chrX,chrX	+,-	RNF128,RIPPLY1	-8688,199569
chr1:47016915-47018030	chr1	+	47016972	47017924	True	NM_001097611,NM_172225	chr1,chr1	-,+	KNCN,DMBX1	-85,-44355
chr5:1294445-1294838	chr5	+	1294452	1294748	True	NM_182632,NM_001193376,NM_198253	chr5,chr5,chr5	+,-,-	SLC6A18,TERT,TERT	-69033,464,464
chr13:27842903-27844657	chr13	+	27843047	27844646	True	NM_182488,NM_206827	chr13,chr13	-,+	USP12,RASL11A	-97014,-121
chr1:155291812-155292032	chr1	+	155291916	155292078	True	NM_001105205,NM_001105204,NM_014328,NM_001039517,NM_001105203	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	RUSC1,RUSC1,RUSC1,C1orf104,RUSC1	1649,-1327,2139,1910,-1327
chr8:142351920-142352168	chr8	+	142351941	142352159	True	NR_024441,NM_005293	chr8,chr8	+,-	LOC731779,GPR20	-1344,25256
chr11:61273542-61273860	chr11	+	61273713	61273845	True	NM_001145077,NM_004200	chr11,chr11	+,-	LRRC10B,SYT7	2426,74503
chr8:10694918-10695649	chr8	+	10695149	10695661	True	NM_001040032,NM_017884	chr8,chr8	+,-	C8orf74,PINX1	-165053,1688
chr1:41843291-41844890	chr1	+	41843775	41844937	True	NM_001956,NR_037868	chr1,chr1	-,+	EDN2,LOC100507178	105457,-363571
chr15:50557892-50558926	chr15	+	50557940	50558734	True	NM_002112,NM_003645	chr15,chr15	-,+	HDC,SLC27A2	-54,-83598
chr19:36708709-36709664	chr19	+	36709015	36709368	True	NM_001042474,NM_007145,NM_152477,NM_001099638,NM_001099639	chr19,chr19,chr19,chr19,chr19	-,+,-,+,+	ZNF565,ZNF146,ZNF565,ZNF146,ZNF146	-3029,-3563,-3449,-3563,-3563
chr20:46416233-46416771	chr20	+	46416645	46416820	True	NM_018837,NM_198596,NM_181659,NM_001161841	chr20,chr20,chr20,chr20	-,-,+,-	SULF2,SULF2,NCOA3,SULF2	-1837,-1285,-286102,-1285
chr11:47735434-47736347	chr11	+	47735452	47736272	True	NM_024783,NM_001164379	chr11,chr11	-,+	AGBL2,FAM180B	80,-127281
chr20:23105394-23107128	chr20	+	23105425	23107123	True	NR_034149,NM_001052	chr20,chr20	-,+	LOC200261,SSTR4	6200,-89421
chr1:3607760-3609190	chr1	+	3607959	3609117	True	NM_001126242,NM_001204189,NM_001126240,NM_001126241,NM_001204192,NM_001204191,NM_001204190,NM_017818	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,+,+,-	TP73,TP73,TP73,TP73,TP73,TP73,TP73,WDR8	-774,-774,-774,-774,5492,-774,-774,-41288
chr9:86540088-86540704	chr9	+	86540274	86540529	True	NM_017576,NM_024945	chr9,chr9	-,+	KIF27,RMI1	-3932,55107
chr1:101471461-101472989	chr1	+	101471684	101472949	True	NM_001077394,NM_133496	chr1,chr1	-,+	DPH5,SLC30A7	18476,-110111
chr19:8807747-8807986	chr19	+	8807790	8808028	True	NM_178525,NM_001004699	chr19,chr19	-,+	ACTL9,OR2Z1	1194,33362
chr14:24629156-24630889	chr14	+	24629344	24630778	True	NM_006084,NM_002818	chr14,chr14	+,-	IRF9,PSME2	1,-13489
chr12:6746249-6747138	chr12	+	6746416	6747162	True	NM_001164094,NM_001142961,NM_020400,NM_032489	chr12,chr12,chr12,chr12	+,-,-,-	COPS7A,LPAR5,LPAR5,ACRBP	85987,-5601,-1119,9468
chr20:42966113-42967116	chr20	+	42966251	42967103	True	NM_178491,NM_001080472	chr20,chr20	+,-	R3HDML,FITM2	-676,-26362
chr17:16256102-16256322	chr17	+	16256203	16256371	True	NM_181716,NM_018955	chr17,chr17	-,+	CENPV,UBB	491,27995
chr7:94144924-94146595	chr7	+	94144924	94146177	True	NM_001099400,NM_022900	chr7,chr7	-,+	SGCE,CASD1	139405,-5812
chr1:149375947-149376389	chr1	+	149376083	149376169	True	NR_027484,NM_001024599	chr1,chr1	+,-	FCGR1C,HIST2H2BF	-6840,23110
chr1:149375947-149376389	chr1	-	120929155	120929205	False	NM_001004340,NR_027337,NM_001017986	chr1,chr1,chr1	-,+,-	FCGR1B,HIST2H2BA,FCGR1B	6789,-23172,6789
chr22:17517147-17517401	chr22	+	17517147	17517338	True	NM_001037814,NR_015352	chr22,chr22	-,+	GAB4,CECR7	-28035,121
chr18:53650734-53651453	chr18	+	53650738	53651369	True	NM_003199,NM_015285	chr18,chr18	-,+	TCF4,WDR7	-394878,667246
chr9:128510650-128511115	chr9	+	128510665	128511115	True	NM_001006618,NM_006195,NR_024123,NM_001134778,NR_024122	chr9,chr9,chr9,chr9,chr9	-,+,+,+,+	MAPKAP1,PBX3,PBX3,PBX3,PBX3	-41152,-1099,-1099,-238,-1099
chr2:234593972-234595358	chr2	+	234594063	234595335	True	NM_001072,NM_019077,NM_001001394,NM_205862	chr2,chr2,chr2,chr2	+,+,-,+	UGT1A6,UGT1A7,DNAJB3,UGT1A6	6176,-3530,57377,4985
chr20:17946882-17948724	chr20	+	17947624	17948714	True	NR_003045,NM_152227,NM_014426,NM_052865	chr20,chr20,chr20,chr20	-,-,-,+	SNORD17,SNX5,SNX5,C20orf72	-4035,830,494,1047
chr19:33180245-33181570	chr19	+	33180587	33181508	True	NM_001105570,NM_032139	chr19,chr19	+,-	NUDT19,ANKRD27	1358,-14485
chrX:102191628-102192065	chrX	+	102191829	102192099	True	NM_018476,NM_001031834	chrX,chrX	-,+	BEX1,RAB40AL	127120,100
chr2:27502645-27504503	chr2	+	27502893	27504545	True	NM_003459,NM_173650,NM_187841,NM_032546	chr2,chr2,chr2,chr2	-,+,+,+	SLC30A3,DNAJC5G,TRIM54,TRIM54	-16933,-4655,751,751
chr12:127630312-127630578	chr12	+	127630311	127630477	True	NR_033970,NR_015398	chr12,chr12	-,+	LOC440117,LOC100128554	-271075,-703335
chr22:42017770-42018803	chr22	+	42017865	42018489	True	NM_015704,NM_001469	chr22,chr22	-,+	PPPDE2,XRCC6	-804,-622
chr5:74068449-74070283	chr5	+	74068507	74069726	True	NM_014886,NM_032380,NM_170681,NM_170691	chr5,chr5,chr5,chr5	+,-,-,-	NSA2,GFM2,GFM2,GFM2	-5462,-5465,-5465,-5465
chr13:111807508-111808287	chr13	+	111807562	111807983	True	NM_017664,NM_003899	chr13,chr13	-,+	ANKRD10,ARHGEF7	-240146,-1553
chr2:229420762-229422726	chr2	+	229421144	229422668	True	NM_178821,NM_030623	chr2,chr2	+,-	WDR69,SPHKAP	-684875,-374783
chr4:109675427-109677129	chr4	+	109675620	109676649	True	NM_001146627,NR_027474,NR_027475,NM_021227,NM_001146590,NM_031279	chr4,chr4,chr4,chr4,chr4,chr4	-,-,-,+,-,-	AGXT2L1,AGXT2L1,AGXT2L1,OSTC,AGXT2L1,AGXT2L1	7639,7639,7639,-103938,7639,7639
chr8:30780187-30780690	chr8	+	30780358	30780491	True	NM_031271,NM_000553	chr8,chr8	-,+	TEX15,WRN	-73825,110286
chrX:48326724-48327217	chrX	+	48326863	48327165	True	NM_012280,NM_033518,NM_177439,NM_177434	chrX,chrX,chrX,chrX	+,-,+,+	FTSJ1,SLC38A5,FTSJ1,FTSJ1	7383,1529,7383,9214
chr16:123914-124116	chr16	+	123952	124067	True	NM_022450,NM_001015052,NM_002434,NM_001015054	chr16,chr16,chr16,chr16	-,+,+,+	RHBDF1,MPG,MPG,MPG	-1323,4101,4101,2950
chr11:65666236-65666687	chr11	+	65666300	65666582	True	NM_005438,NM_006848	chr11,chr11	-,+	FOSL1,CCDC85B	1465,-8476
chr3:149531386-149531756	chr3	+	149531436	149531800	True	NM_007282,NM_001144960,NM_183381	chr3,chr3,chr3	+,-,+	RNF13,C3orf16,RNF13	-1012,-20826,-1012
chrX:133507536-133507895	chrX	+	133507635	133507893	True	NM_032458,NM_001015877,NM_032335,NR_030587	chrX,chrX,chrX,chrX	+,+,+,-	PHF6,PHF6,PHF6,MIR450B	-344,-344,-344,166450
chr14:57279082-57279317	chr14	+	57279088	57279312	True	NM_021728,NM_172337,NR_029385	chr14,chr14,chr14	-,-,+	OTX2,OTX2,OTX2OS1	-1904,-6743,588
chr15:99547419-99548747	chr15	+	99548397	99548691	True	NM_001102612,NM_001167902,NM_015286	chr15,chr15,chr15	-,-,+	PGPEP1L,PGPEP1L,SYNM	244,2383,96594
chr9:32567043-32567247	chr9	+	32567089	32567295	True	NM_001199987,NM_002493,NR_033992,NM_182739	chr9,chr9,chr9,chr9	-,-,+,-	NDUFB6,NDUFB6,LOC100129250,NDUFB6	5937,5937,-15369,5937
chr1:166809237-166809900	chr1	+	166809324	166809914	True	NM_017542,NM_053053	chr1,chr1	+,-	POGK,TADA1	-653,35790
chr22:29602267-29604043	chr22	+	29602760	29603810	True	NM_012265,NM_133455	chr22,chr22	-,+	RHBDD3,EMID1	60154,-859
chrX:105068292-105068655	chrX	+	105068291	105068684	True	NM_198465,NM_000354	chrX,chrX	+,-	NRK,SERPINA7	-1806,214084
chr10:127515288-127516395	chr10	+	127515720	127516225	True	NM_000375,NM_016567,NM_078468,NM_078469	chr10,chr10,chr10,chr10	-,+,+,+	UROS,BCCIP,BCCIP,BCCIP	-3883,-3682,-3682,-3682
chr17:16590413-16592095	chr17	+	16590589	16591726	True	NM_020787,NM_014695	chr17,chr17	-,+	ZNF624,CCDC144A	-33422,1912
chr9:103192549-103192766	chr9	+	103192658	103192815	True	NM_080655,NM_001198805,NM_017746,NM_001198807,NM_001198806	chr9,chr9,chr9,chr9,chr9	+,+,-,+,+	C9orf30,C9orf30,TEX10,C9orf30,C9orf30	-3214,-2998,-77399,-3214,-913
chr5:45656332-45658060	chr5	+	45656566	45657586	True	NM_021072,NM_016640	chr5,chr5	-,+	HCN1,MRPS30	38702,-847590
chr11:36401936-36402725	chr11	+	36401937	36402765	True	NM_024841,NM_001160168,NM_014186	chr11,chr11,chr11	+,+,-	PRR5L,PRR5L,COMMD9	-4459,-4459,-90938
chr1:46976635-46976846	chr1	+	46976635	46976835	True	NM_147192,NM_001097611,NM_172225	chr1,chr1,chr1	+,-,+	DMBX1,KNCN,DMBX1	-4018,40102,-4018
chrX:100121915-100123416	chrX	+	100123007	100123441	True	NM_001325,NM_013955,NM_007052	chrX,chrX,chrX	+,-,-	CSTF2,NOX1,NOX1	-47725,5943,5943
chr5:169658529-169659861	chr5	+	169658880	169659874	True	NM_001102609,NM_005565	chr5,chr5	+,-	C5orf58,LCP2	75,64998
chr5:175520956-175522476	chr5	+	175521657	175522501	True	NR_036494,NM_001079529	chr5,chr5	-,+	LOC643201,FAM153B	103847,-9799
chr5:175520956-175522476	chr5	-	177169657	177170502	False	NR_003615,NM_173663	chr5,chr5	+,-	LOC728554,FAM153A	131759,37053
chrY:15815259-15815630	chrY	+	15815397	15815667	True	NM_182660,NM_004202	chrY,chrY	-,+	UTY,TMSB4Y	-222847,-1
chr19:3761988-3762661	chr19	+	3761992	3762700	True	NM_004886,NM_172251,NM_032753	chr19,chr19,chr19	-,+,-	APBA3,MRPL54,RAX2	-319,-36,9569
chr20:4664965-4666900	chr20	+	4665274	4666868	True	NM_000311,NM_001080121,NM_001080122,NM_001080123,NM_183079,NR_024267	chr20,chr20,chr20,chr20,chr20,chr20	+,+,+,+,+,-	PRNP,PRNP,PRNP,PRNP,PRNP,PRNT	-72,-72,-72,288,-72,54496
chr1:70671431-70672640	chr1	+	70671492	70672431	True	NM_017768,NM_004768,NM_001190987	chr1,chr1,chr1	-,+,+	LRRC40,SRSF11,SRSF11	-131,-178,-178
chr11:74702242-74703720	chr11	+	74702480	74703696	True	NM_006656,NM_182969	chr11,chr11	+,-	NEU3,XRRA1	-2581,-42248
chr11:18344235-18345688	chr11	+	18344258	18345511	True	NM_007216,NM_005316,NM_181508,NM_001142307,NM_181507	chr11,chr11,chr11,chr11,chr11	-,+,-,+,-	HPS5,GTF2H1,HPS5,GTF2H1,HPS5	-537,-493,-537,-493,-537
chr5:90572766-90574263	chr5	+	90573002	90574128	True	NM_020801,NR_027435	chr5,chr5	-,+	ARRDC3,LOC100129716	105073,102035
chr9:139011563-139012078	chr9	+	139011764	139012048	True	NM_015597,NM_152833	chr9,chr9	+,-	GPSM1,C9orf69	209883,-1033
chr5:140221710-140222262	chr5	+	140221764	140222298	True	NM_014005,NM_002109,NM_031856,NM_031857,NM_018910,NM_018911,NM_031852	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,-,+,+,+,+,+	PCDHA9,HARS,PCDHA8,PCDHA9,PCDHA7,PCDHA8,PCDHA7	5058,-150793,-915,5058,-7853,-915,-7853
chr5:140221710-140222262	chr5	+	140208654	140208816	False	NM_031849,NM_002109,NM_018908,NM_018909,NM_031848,NM_031501,NM_018910,NM_031852	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,-,+,+,+,+,+,+	PCDHA6,HARS,PCDHA5,PCDHA6,PCDHA6,PCDHA5,PCDHA7,PCDHA7	-1055,-137683,-7344,-1055,-1055,-7344,5152,5152
chr1:3565707-3566146	chr1	+	3565710	3566055	True	NM_001204188,NM_001204184,NM_001204185,NM_001204186,NM_001204187,NM_005427,NM_017818	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,+,-	TP73,TP73,TP73,TP73,TP73,TP73,WDR8	3073,3073,3073,3073,3073,3073,667
chr2:174625454-174626518	chr2	+	174625523	174626387	True	NM_145810,NM_001017371	chr2,chr2	+,-	CDCA7,SP3	-406021,202610
chrX:110925195-110925921	chrX	+	110925239	110925768	True	NM_001168385,NR_033125,NM_001039210,NR_033134,NM_018466,NR_033127,NR_033131,NR_033132,NR_033124,NM_001099922,NR_033129,NR_033128,NM_178153	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,+,+,+,+,+,+,+,-	ALG13,ALG13,ALG13,ALG13,ALG13,ALG13,ALG13,ALG13,ALG13,ALG13,ALG13,ALG13,DCX	-944,-944,-944,-892,-944,-892,-892,-405,-944,-944,-892,-892,-269779
chr14:53196044-53196688	chr14	+	53196140	53196619	True	NM_014584,NM_001130701,NM_145251	chr14,chr14,chr14	-,+,+	ERO1L,STYX,STYX	-33721,263,263
chr8:11625020-11625762	chr8	+	11625364	11625752	True	NM_001135747,NM_001135746,NM_145043,NM_001908,NM_001135748	chr8,chr8,chr8,chr8,chr8	+,+,+,-,+	NEIL2,NEIL2,NEIL2,CTSB,NEIL2	1419,1419,1419,99944,1419
chr21:39500117-39500363	chr21	+	39500124	39500402	True	NR_026842,NR_026839,NR_026840,NR_026841,NR_026838,NM_005867	chr21,chr21,chr21,chr21,chr21,chr21	+,+,+,+,+,-	DSCR8,DSCR8,DSCR8,DSCR8,DSCR8,DSCR4	-6633,-6633,-6633,-6633,-6633,-6670
chr3:158369651-158369941	chr3	+	158369651	158369983	True	NM_024996,NM_020169	chr3,chr3	+,-	GFM1,LXN	-7387,20549
chr2:241762595-241763305	chr2	+	241762637	241763109	True	NM_000030,NM_004321	chr2,chr2	+,-	AGXT,KIF1A	45052,-3013
chr6:42883091-42883582	chr6	+	42883292	42883554	True	NM_138296,NM_001008739	chr6,chr6	+,-	PTCRA,C6orf226	172,-24738
chr3:58486744-58487268	chr3	+	58486801	58487287	True	NM_001128214,NM_003500,NM_153331	chr3,chr3,chr3	+,-,+	KCTD6,ACOX2,KCTD6	-9037,35692,-2768
chr3:49209111-49210027	chr3	+	49209521	49210019	True	NM_173546,NM_022903	chr3,chr3	+,-	KLHDC8B,CCDC71	-558,-5736
chr17:62082504-62082891	chr17	+	62082519	62082747	True	NM_001164257,NM_000873,NM_001191031,NM_001191030,NM_001191029	chr17,chr17,chr17,chr17,chr17	+,-,+,+,+	C17orf72,ICAM2,C17orf72,C17orf72,C17orf72	-6859,1586,-6859,-6859,-6859
chr9:94898831-94899119	chr9	+	94898836	94899106	True	NR_015444,NM_178324,NR_027341	chr9,chr9,chr9	+,-,+	LOC100128076,SPTLC1,C9orf44	-3771,-21146,4642
chr12:124084980-124085781	chr12	+	124085521	124085770	True	NM_001414,NM_020936	chr12,chr12	-,+	EIF2B1,DDX55	32604,901
chr3:128374241-128375078	chr3	+	128374422	128374751	True	NM_004637,NM_002950	chr3,chr3	+,-	RAB7A,RPN1	70227,-4703
chr8:37263861-37265584	chr8	+	37263970	37265163	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	288137,340452
chr5:137370993-137371443	chr5	+	137370994	137371471	True	NM_016603,NM_001101801,NM_001101800,NR_037900	chr5,chr5,chr5,chr5	-,-,-,+	FAM13B,FAM13B,FAM13B,LOC100130172	-2192,-2192,-2192,-2582
chr1:63835782-63837201	chr1	+	63836049	63837208	True	NM_014288,NM_013339	chr1,chr1	-,+	ITGB3BP,ALG6	151677,-2846
chr17:28818392-28820103	chr17	+	28818691	28819982	True	NM_206832,NM_004871	chr17,chr17	-,+	TMIGD1,GOSR1	-157626,-14323
chr22:33455202-33456125	chr22	+	33455207	33456149	True	NM_000362,NM_001135774	chr22,chr22	+,-	TIMP3,SYN3	-258456,-830
chr13:19581933-19583170	chr13	+	19581942	19583166	True	NR_002801,NR_026852	chr13,chr13	-,+	PHF2P1,LOC348021	109307,-54
chr9:125277754-125278673	chr9	+	125277804	125278557	True	NM_012363,NM_054107,NM_001004452	chr9,chr9,chr9	-,+,+	OR1N1,OR1J2,OR1J4	11072,-4774,2862
chr15:78858647-78859314	chr15	+	78858706	78859292	True	NM_001166694,NM_000745	chr15,chr15	-,+	CHRNA3,CHRNA5	54395,-895
chr1:19638238-19638522	chr1	+	19638298	19638440	True	NM_003689,NM_001040125,NM_001040126,NM_017765	chr1,chr1,chr1,chr1	-,+,+,+	AKR7A2,PQLC2,PQLC2,PQLC2	250,299,299,299
chr13:50570392-50570675	chr13	+	50570411	50570675	True	NM_005798,NM_052811,NR_037407,NM_001007278,NM_213590	chr13,chr13,chr13,chr13,chr13	+,+,-,+,+	TRIM13,TRIM13,MIR3613,TRIM13,TRIM13	467,467,12,467,467
chr11:89651048-89651941	chr11	+	89651089	89651949	True	NM_001105522	chr11	-	TRIM49L1	1677
chr11:89651048-89651941	chr11	-	89658858	89659718	False	NM_001105522	chr11	+	TRIM49L1	-1677
chr1:202440586-202441271	chr1	+	202440601	202441287	True	NM_032103,NM_014176,NM_032104	chr1,chr1,chr1	+,-,+	PPP1R12B,UBE2T,PPP1R12B	-8781,-129507,-8781
chr1:38230761-38231297	chr1	+	38230830	38231316	True	NM_001031740,NM_001099439,NM_173641	chr1,chr1,chr1	+,-,-	MANEAL,EPHA10,EPHA10	28457,-6,-6
chr6:26882640-26883572	chr6	+	26883061	26883302	True	NR_003504,NR_026775	chr6,chr6	-,+	GUSBL1,NCRNA00240	41092,41469
chr4:15425532-15426740	chr4	+	15425829	15426791	True	NM_001193534,NM_031911	chr4,chr4	-,+	FBXL5,C1QTNF7	230296,2837
chr16:12143280-12144871	chr16	+	12143854	12144480	True	NM_001080530,NM_001130007	chr16,chr16	+,-	SNX29,GSPT1	1574,-133335
chr7:66041048-66042512	chr7	+	66041271	66042425	True	NM_001167961,NR_002933	chr7,chr7	+,-	KCTD7,LOC493754	51442,1137
chr10:103826312-103826526	chr10	+	103826333	103826539	True	NM_024747,NM_024541	chr10,chr10	+,-	HPS6,C10orf76	-1260,-10401
chr5:139726514-139727164	chr5	+	139726575	139727191	True	NM_001945,NM_031467	chr5,chr5	-,+	HBEGF,SLC4A9	-387,12595
chr16:3161170-3162076	chr16	+	3161632	3162064	True	NM_001042428,NR_024167,NR_024166,NM_003456	chr16,chr16,chr16,chr16	+,-,-,+	ZNF205,MGC3771,MGC3771,ZNF205	498,3585,3585,498
chr12:3602935-3603348	chr12	+	3603110	3603388	True	NM_019854,NM_001144958	chr12,chr12	+,-	PRMT8,EFCAB4B	-2736,259028
chr19:15563722-15564022	chr19	+	15563804	15564022	True	NR_031716,NM_021241	chr19,chr19	+,-	MIR1470,WIZ	-3496,-3042
chr12:49717015-49717264	chr12	+	49717014	49717194	True	NM_001100620,NM_001008223,NM_005480	chr12,chr12,chr12	+,-,+	TROAP,C1QL4,TROAP	-94,13827,-94
chr5:130326319-130327369	chr5	+	130326335	130327150	True	NM_181705,NR_024611	chr5,chr5	+,-	LYRM7,HINT1	179490,173935
chr20:20689042-20689681	chr20	+	20689376	20689522	True	NM_020343,NM_002196	chr20,chr20	-,+	RALGAPA2,INSM1	3808,-340673
chr7:100273278-100273534	chr7	+	100273367	100273560	True	NM_005273,NM_022574	chr7,chr7	+,-	GNB2,GIGYF1	-2055,13360
chr19:50474560-50474900	chr19	+	50474747	50474907	True	NM_052884,NR_002825	chr19,chr19	-,+	SIGLEC11,SIGLEC16	-10318,-1886
chr19:50474560-50474900	chr19	-	50462460	50462510	False	NM_001135163,NM_052884,NR_002825	chr19,chr19,chr19	-,-,+	SIGLEC11,SIGLEC11,SIGLEC16	1969,1969,10401
chr3:196241903-196242842	chr3	+	196241958	196242325	True	NM_001105573,NM_001077657	chr3,chr3	+,-	FBXO45,C3orf43	53399,25
chr17:36494955-36496655	chr17	+	36495127	36496008	True	NM_001004334,NM_014598	chr17,chr17	-,+	GPR179,SOCS7	3736,11998
chr7:155602824-155603125	chr7	+	155602839	155603143	True	NM_000193,NM_053043	chr7,chr7	-,+	SHH,RBM33	1874,-165687
chr19:49622609-49622810	chr19	+	49622799	49622859	True	NM_018111,NM_003660,NM_022165	chr19,chr19,chr19	-,+,+	C19orf73,PPFIA3,LIN7B	-402,-187,-5232
chr4:25379272-25380094	chr4	+	25379330	25380024	True	NM_013367,NM_016955	chr4,chr4	+,-	ANAPC4,SEPSECS	-533,-217126
chr2:238768590-238768847	chr2	+	238768790	238768886	True	NM_005855,NR_033308	chr2,chr2	+,-	RAMP1,RAB17	-654,-269021
chr16:419395-419715	chr16	+	419431	419607	True	NM_006428,NR_024453	chr16,chr16	-,+	MRPL28,LOC100134368	1012,12633
chr9:115485062-115486200	chr9	+	115485555	115486183	True	NM_001012994,NM_021218	chr9,chr9	+,-	SNX30,C9orf80	26950,-5168
chr8:22858000-22858823	chr8	+	22858005	22858707	True	NM_003842,NM_015178,NM_001160037	chr8,chr8,chr8	-,+,+	TNFRSF10B,RHOBTB2,RHOBTB2	68043,-971,-4702
chr20:33545586-33546427	chr20	+	33545607	33546229	True	NM_000178,NM_020884	chr20,chr20	-,+	GSS,MYH7B	-2006,-1955
chr1:78960582-78961288	chr1	+	78960582	78961312	True	NM_022159,NM_001039585,NM_000959	chr1,chr1,chr1	-,+,+	ELTD1,PTGFR,PTGFR	511244,-3913,-3913
chr14:90423048-90423406	chr14	+	90423339	90423441	True	NM_145231,NM_018319,NM_001008744	chr14,chr14,chr14	-,+,+	EFCAB11,TDP1,TDP1	-2250,-1144,-1144
chr4:96761250-96761611	chr4	+	96761256	96761596	True	NM_005390,NM_003728	chr4,chr4	+,-	PDHA2,UNC5C	-68,-290895
chr21:30393841-30394915	chr21	+	30394454	30394590	True	NM_016940,NM_001001992,NM_001032410,NM_006447	chr21,chr21,chr21,chr21	-,+,+,+	RWDD2B,USP16,USP16,USP16	-2769,2347,2347,2347
chr8:75226789-75227429	chr8	+	75226809	75227443	True	NM_018972,NM_020647	chr8,chr8	+,-	GDAP1,JPH1	35174,6169
chr3:49044568-49044950	chr3	+	49044680	49044922	True	NM_001009996,NM_018031	chr3,chr3	-,+	DALRD3,WDR6	11145,-94
chr1:153919166-153920277	chr1	+	153919352	153920116	True	NM_130898,NM_014856	chr1,chr1	+,-	CREB3L4,DENND4B	20280,-198
chr1:26195917-26196630	chr1	+	26196187	26196567	True	NM_178422,NM_001099626	chr1,chr1	-,+	PAQR7,FAM54B	1227,-48920
chr8:25042849-25043149	chr8	+	25042976	25043197	True	NM_024940,NM_006158	chr8,chr8	+,-	DOCK5,NEFL	-740,-228845
chr13:107167721-107168163	chr13	+	107167774	107168156	True	NM_004093,NR_034119	chr13,chr13	-,+	EFNB2,LOC728192	19282,-138927
chr5:10625759-10626224	chr5	+	10625758	10625990	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-61376,135447
chr12:50221313-50221557	chr12	+	50221320	50221380	True	NM_001037806,NR_027500,NR_027501,NR_027499	chr12,chr12,chr12,chr12	-,+,+,+	NCKAP5L,LOC100286844,LOC100286844,LOC100286844	878,945,945,945
chr1:220926424-220927282	chr1	+	220926645	220927086	True	NM_017898,NM_012414	chr1,chr1	+,-	MOSC2,RAB3GAP2	-5021,-480802
chr19:54602233-54602509	chr19	+	54602282	54602349	True	NM_133169,NM_133168,NM_130771,NM_004542,NM_206818	chr19,chr19,chr19,chr19,chr19	-,-,-,+,-	OSCAR,OSCAR,OSCAR,NDUFA3,OSCAR	1856,1856,1856,3810,1856
chr12:103994243-103995292	chr12	+	103994260	103995000	True	NM_017564,NM_001099336	chr12,chr12	+,-	STAB2,C12orf42	-13242,-104511
chr16:28304844-28305924	chr16	+	28305123	28305831	True	NM_001024401,NM_015171	chr16,chr16	+,-	SBK1,XPO6	-1334,-81933
chr7:121034848-121035913	chr7	+	121034930	121035790	True	NM_057168,NM_001040020,NM_014888	chr7,chr7,chr7	+,-,-	WNT16,FAM3C,FAM3C	-65898,682,682
chr4:86954406-86956378	chr4	+	86954423	86956207	True	NM_031305,NM_138981	chr4,chr4	+,-	ARHGAP24,MAPK10	-103048,72651
chr4:25866607-25866944	chr4	+	25866677	25866983	True	NM_001145432,NM_015187	chr4,chr4	+,-	C4orf52,SEL1L3	48830,-2067
chr12:49248466-49249077	chr12	+	49248540	49248826	True	NM_004818,NM_000725	chr12,chr12	-,+	DDX23,CACNB3	-2583,-36086
chr7:6594355-6595568	chr7	+	6594709	6594939	True	NM_001134387,NM_001145118	chr7,chr7	+,-	ZDHHC4,GRID2IP	22125,-3642
chr19:5571537-5572119	chr19	+	5571890	5571983	True	NM_001201338,NR_027064	chr19,chr19	+,-	SAFB,PLAC2	51062,-3885
chr11:93476460-93476744	chr11	+	93476559	93476785	True	NR_031639,NM_014039,NR_002973,NM_024116,NR_002959	chr11,chr11,chr11,chr11,chr11	-,+,-,-,-	MIR1304,C11orf54,SNORA40,TAF1D,SNORA18	-9629,-1817,-8157,-1856,-9796
chr15:62362172-62363481	chr15	+	62362183	62363385	True	NM_017684,NM_001018088,NM_018080,NM_020821,NM_207322	chr15,chr15,chr15,chr15,chr15	-,-,-,-,+	VPS13C,VPS13C,VPS13C,VPS13C,C2CD4A	-9519,-9519,-9519,-9519,-3058
chr21:45606180-45606471	chr21	+	45606215	45606503	True	NM_198155,NM_015259	chr21,chr21	+,-	C21orf33,ICOSLG	-52772,54381
chr3:137906959-137907523	chr3	+	137906973	137907539	True	NM_014154,NM_015396,NM_213654,NM_016216	chr3,chr3,chr3,chr3	+,+,+,-	ARMC8,ARMC8,ARMC8,DBR1	-877,-877,-877,-13182
chr9:32400127-32402115	chr9	+	32400417	32402140	True	NM_014314,NM_002197	chr9,chr9	-,+	DDX58,ACO1	124232,-15867
chr7:154861823-154862045	chr7	+	154861956	154862054	True	NM_007349,NM_024012	chr7,chr7	-,+	PAXIP1,HTR5A	-67274,491
chr11:77706102-77707566	chr11	+	77706153	77707088	True	NM_003251,NM_033547	chr11,chr11	+,-	THRSP,INTS4	67818,-436
chr14:71005605-71007600	chr14	+	71005838	71007490	True	NM_003814,NM_003813	chr14,chr14	-,+	ADAM20,ADAM21	-4106,-81672
chr11:1862241-1862475	chr11	+	1862332	1862436	True	NM_001145829,NR_036185,NM_138567,NM_003282,NM_001145841	chr11,chr11,chr11,chr11,chr11	+,-,+,+,+	TNNI2,MIR4298,SYT8,TNNI2,TNNI2	-1664,18380,-6709,-2150,-951
chr22:31681474-31683447	chr22	+	31681718	31682940	True	NM_001135911,NM_052880,NM_016733	chr22,chr22,chr22	-,-,+	PIK3IP1,PIK3IP1,LIMK2	5630,5630,-37422
chr12:53893553-53893902	chr12	+	53893746	53893832	True	NM_003717,NM_004178,NM_134323,NM_001193511,NM_134324,NM_006301	chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,-,+,-	NPFF,TARBP2,TARBP2,MAP3K12,TARBP2,MAP3K12	7640,872,872,-302,1544,-302
chr7:150783017-150783240	chr7	+	150783065	150783261	True	NM_031434,NM_031946,NM_001042535,NM_001136044,NM_033015,NM_006712	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,-,-,-	TMUB1,AGAP3,AGAP3,TMUB1,FASTK,FASTK	-2652,564,564,-2445,-5114,-5114
chr19:2306123-2306371	chr19	+	2306159	2306351	True	NM_001101391,NM_001077238	chr19,chr19	-,+	LINGO3,SPPL2B	1855,22277
chr17:20799278-20799642	chr17	+	20799419	20799557	True	NM_001004306,NM_015510	chr17,chr17	-,+	CCDC144NL,DHRS7B	-22,230700
chr17:20799278-20799642	chr17	-	16593555	16593628	False	NM_020787,NM_014695	chr17,chr17	-,+	ZNF624,CCDC144A	-36388,10
chr17:20799278-20799642	chr17	+	18528846	18528920	False	NR_036647,NM_001037330	chr17,chr17	-,+	CCDC144B,TRIM16L	84,96481
chr11:116694370-116695458	chr11	+	116694482	116694782	True	NM_000482,NM_000040	chr11,chr11	-,+	APOA4,APOC3	-471,5841
chr3:192449442-192450031	chr3	+	192449448	192450051	True	NM_020386,NM_004113	chr3,chr3	+,-	HRASLS,FGF12	508866,-4060
chrY:8551332-8551797	chrY	+	8551339	8551831	True	NR_001550,NR_001549	chrY,chrY	-,+	TTTY18,TTTY19	138,20681
chr10:736137-736363	chr10	+	736170	736346	True	NR_027152,NM_014974	chr10,chr10	+,-	C10orf108,DIP2C	-40204,-562
chr11:96071462-96072709	chr11	+	96071565	96072536	True	NR_036125,NM_032427	chr11,chr11	+,-	MIR1260B,MAML2	2065,3859
chr19:4244820-4245124	chr19	+	4244892	4244972	True	NM_001169126,NM_018074	chr19,chr19	-,+	TMIGD2,CCDC94	57512,2138
chr13:111971546-111972178	chr13	+	111971555	111972165	True	NM_152324,NM_017664	chr13,chr13	+,-	C13orf16,ANKRD10	849,-404139
chr19:37995984-37997491	chr19	+	37996180	37997486	True	NM_001013659,NM_152484	chr19,chr19	+,-	ZNF793,ZNF569	354,-37841
chr16:74637976-74638866	chr16	+	74638147	74638647	True	NM_002811,NM_001145667,NR_027265,NM_001145666,NR_027264,NM_012201	chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,-,-,-	PSMD7,GLG1,GLG1,GLG1,GLG1,GLG1	-307538,2455,2455,2455,2455,2455
chr17:73934662-73936117	chr17	+	73934971	73936023	True	NM_001080542,NM_001113324	chr17,chr17	-,+	FBF1,C17orf106	1146,39274
chr19:11923411-11924072	chr19	+	11923411	11923698	True	NM_152357,NM_001080493	chr19,chr19	+,-	ZNF440,ZNF823	1408,-73651
chr6:7908862-7909640	chr6	+	7909099	7909597	True	NR_027712,NM_001145549,NM_030810	chr6,chr6,chr6	+,-,-	PIP5K1P1,TXNDC5,TXNDC5	76737,764,1501
chr11:68451676-68451942	chr11	+	68451743	68451991	True	NM_015973,NM_004923	chr11,chr11	+,-	GAL,MTL5	-5,67047
chr19:48323632-48324960	chr19	+	48324071	48324928	True	NM_000554,NM_198479	chr19,chr19	+,-	CRX,TPRX1	170,-17210
chr10:12114065-12114343	chr10	+	12114111	12114196	True	NM_018706,NM_080599	chr10,chr10	+,-	DHTKD1,UPF2	-3238,-29088
chr17:81039786-81040062	chr17	+	81039800	81040100	True	NM_001009905,NM_001004431	chr17,chr17	-,+	B3GNTL1,METRNL	-30114,-2284
chr4:141675623-141676976	chr4	+	141675950	141676956	True	NM_015130,NM_153702	chr4,chr4	-,+	TBC1D9,ELMOD2	565,-230701
chr16:82204327-82204763	chr16	+	82204374	82204531	True	NM_005792,NM_002153	chr16,chr16	-,+	MPHOSPH6,HSD17B2	-545,-135567
chr16:1541339-1541662	chr16	+	1541365	1541597	True	NM_001013658,NM_016111	chr16,chr16	-,+	PTX4,TELO2	-2897,1754
chr10:93001395-93001868	chr10	+	93001439	93001854	True	NR_002779,NM_032373	chr10,chr10	-,+	NUDT9P1,PCGF5	-88602,-21133
chr1:201081380-201081684	chr1	+	201081386	201081678	True	NM_000069,NM_001164586	chr1,chr1	-,+	CACNA1S,IGFN1	66,78274
chr5:140729680-140729994	chr5	+	140729693	140730041	True	NM_032095,NM_018923,NM_018922,NM_032096,NM_005642,NM_032053,NM_032011,NM_018916,NM_018917	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,-,+,+,+,+	PCDHGB1,PCDHGB2,PCDHGB1,PCDHGB2,TAF7,PCDHGA4,PCDHGA3,PCDHGA3,PCDHGA4	-2,9661,-2,9661,-29342,4726,-6143,-6143,4726
chr2:223916705-223916918	chr2	+	223916749	223916967	True	NM_080671,NM_005687	chr2,chr2	+,-	KCNE4,FARSB	18,-395922
chr9:112079606-112080795	chr9	+	112079794	112080834	True	NM_018424,NM_019114,NM_001037293	chr9,chr9,chr9	-,-,+	EPB41L4B,EPB41L4B,PALM2	2237,2237,322233
chr19:39303504-39305098	chr19	+	39303514	39305123	True	NM_006149,NM_001042507	chr19,chr19	-,+	LGALS4,LGALS7B	-52,-23715
chr12:43073068-43073521	chr12	+	43073089	43073560	True	NM_016488,NM_153026	chr12,chr12	+,-	PPHLN1,PRICKLE1	-353194,-89517
chr15:75105198-75105745	chr15	+	75105272	75105760	True	NM_021819,NM_001099436	chr15,chr15	+,-	LMAN1L,ULK3	-129,29842
chr8:39366853-39368466	chr8	+	39367044	39368470	True	NM_001190956,NR_001569	chr8,chr8	+,-	ADAM18,ADAM3A	73616,12050
chr6:16752537-16754407	chr6	+	16752773	16754369	True	NM_001128164,NM_001190766,NM_000332	chr6,chr6,chr6	-,+,-	ATXN1,FLJ23152,ATXN1	7408,348119,7408
chr20:49638550-49638798	chr20	+	49638671	49638755	True	NM_002237,NM_014484	chr20,chr20	-,+	KCNG1,MOCS3	972,-63359
chr3:48541006-48541372	chr3	+	48541050	48541282	True	NM_033629,NM_016479	chr3,chr3	+,-	TREX1,SHISA5	-33872,429
chr6:26216557-26217266	chr6	+	26216644	26217250	True	NM_003532,NM_003518,NM_021052	chr6,chr6,chr6	+,-,+	HIST1H3E,HIST1H2BG,HIST1H2AE	8132,-20,11
chr1:1844695-1845059	chr1	+	1844822	1844918	True	NM_138705,NM_178545	chr1,chr1	+,-	CALML6,TMEM52	1347,5872
chr11:13984065-13984463	chr11	+	13984070	13984416	True	NM_006108,NM_001177315	chr11,chr11	+,-	SPON1,RRAS2	-207,395665
chr6:149661018-149661458	chr6	+	149661017	149661470	True	NM_207360,NM_015093	chr6,chr6	-,+	ZC3H12D,TAB2	144735,-21638
chr5:43398465-43398807	chr5	+	43398518	43398679	True	NM_012343,NM_148672	chr5,chr5	+,-	NNT,CCL28	204111,13870
chr5:175082299-175084151	chr5	+	175082425	175084099	True	NM_001131055,NM_000794	chr5,chr5	+,-	HRH2,DRD1	940,-211262
chr8:47519575-47520071	chr8	+	47519753	47520091	True	NR_027013,NM_005195	chr8,chr8	+,-	NCRNA00293,CEBPD	232416,1130685
chr15:50367059-50367779	chr15	+	50367061	50367820	True	NM_001159629,NM_024837	chr15,chr15	+,-	SLC27A2,ATP8B4	106572,43652
chr10:65275303-65277227	chr10	+	65275478	65277257	True	NM_032776,NM_001001330	chr10,chr10	-,+	JMJD1C,REEP3	-49756,3865
chr20:57268667-57268893	chr20	+	57268672	57268804	True	NR_029844,NM_024663,NM_001204873,NM_001204872	chr20,chr20,chr20,chr20	-,+,+,+	MIR296,NPEPL1,NPEPL1,NPEPL1	123995,-861,-4536,-4536
chr21:33956352-33956922	chr21	+	33956480	33956970	True	NM_058187,NM_144659	chr21,chr21	+,-	C21orf63,TCP10L	-171779,925
chr1:245005292-245007245	chr1	+	245005542	245007263	True	NR_026778,NM_198076	chr1,chr1	-,+	NCRNA00201,FAM36A	3035,-6965
chr10:27391626-27392720	chr10	+	27391763	27392545	True	NM_014915,NM_001172303	chr10,chr10	-,+	ANKRD26,MASTL	-2336,51207
chr1:24283839-24284910	chr1	+	24283943	24284841	True	NM_001191006,NM_017761	chr1,chr1	-,+	SRSF10,PNRC2	22172,1459
chr2:197501065-197501363	chr2	+	197501092	197501368	True	NM_020760,NM_001080539	chr2,chr2	-,+	HECW2,CCDC150	-43757,2987
chr19:49976529-49976852	chr19	+	49976537	49976739	True	NM_001204502,NM_001204503,NM_001459,NM_017916	chr19,chr19,chr19,chr19	+,+,+,-	FLT3LG,FLT3LG,FLT3LG,PIH1D1	726,1078,726,-21422
chr2:223290082-223290357	chr2	+	223290148	223290262	True	NM_013942,NM_152386	chr2,chr2	-,+	PAX3,SGPP2	-126433,-877
chr3:109035850-109036433	chr3	+	109035999	109036435	True	NM_138815,NM_001145553	chr3,chr3	-,+	DPPA2,FLJ25363	-635,92401
chrX:139114542-139114858	chrX	+	139114671	139114869	True	NM_001013403,NM_000133	chrX,chrX	-,+	CXorf66,F9	-66994,-501828
chr2:208581687-208582787	chr2	+	208582051	208582551	True	NM_001142300,NM_152523,NM_003468	chr2,chr2,chr2	+,+,-	CCNYL1,CCNYL1,FZD5	-5844,-5844,51642
chr11:17374551-17375073	chr11	+	17374654	17375024	True	NM_000525,NM_001202439	chr11,chr11	-,+	KCNJ11,DKFZp686O24166	35232,-1396
chr7:79769458-79771084	chr7	+	79769614	79770970	True	NM_001102386,NM_002069	chr7,chr7	-,+	GNAT3,GNAI1	370325,-5538
chr17:7762830-7764224	chr17	+	7762852	7764023	True	NM_032356,NM_144607,NM_203411	chr17,chr17,chr17	-,+,+	LSMD1,CYB5D1,TMEM88	-1680,-1839,-4519
chr14:103240349-103241879	chr14	+	103240999	103241509	True	NM_145726,NM_152326,NM_001199427,NM_003300,NM_145725	chr14,chr14,chr14,chr14,chr14	+,-,+,+,+	TRAF3,ANKRD9,TRAF3,TRAF3,TRAF3	2306,-264871,2306,2306,2306
chr15:33358852-33360020	chr15	+	33359126	33360036	True	NM_001036,NM_001103184	chr15,chr15	+,-	RYR3,FMN1	243140,99
chr22:30791619-30792257	chr22	+	30791643	30792231	True	NM_033382,NM_001204204,NM_001017981,NM_012429	chr22,chr22,chr22,chr22	+,+,-,+	SEC14L2,SEC14L2,RNF215,SEC14L2	698,698,-8341,698
chr1:110610549-110610881	chr1	+	110610574	110610908	True	NM_033088,NM_006492	chr1,chr1	+,-	FAM40A,ALX3	-33384,2464
chr13:77565452-77565920	chr13	+	77565506	77565886	True	NM_006493,NM_012158	chr13,chr13	+,-	CLN5,FBXL3	172,35495
chr12:5603178-5603593	chr12	+	5603304	5603564	True	NM_020373,NM_002527	chr12,chr12	-,+	ANO2,NTF3	451884,-57
chr7:138714818-138715112	chr7	+	138714826	138714901	True	NM_001144920,NM_080660	chr7,chr7	+,-	TTC26,ZC3HAV1L	103588,5933
chr13:25861004-25861238	chr13	+	25861004	25861142	True	NM_001008564,NM_004685	chr13,chr13	+,-	NUPL1,MTMR6	14523,612
chr20:19732568-19733694	chr20	+	19732579	19732663	True	NM_016652,NM_018993	chr20,chr20	-,+	CRNKL1,RIN2	304077,137546
chr3:16555381-16556790	chr3	+	16555705	16556729	True	NM_138381,NM_015150	chr3,chr3	+,-	OXNAD1,RFTN1	-249089,-483
chr1:16482683-16483656	chr1	+	16482811	16483690	True	NM_001165945,NM_004431	chr1,chr1	+,-	CLCNKB,EPHA2	-107578,-229
chr2:17699902-17700336	chr2	+	17699907	17700194	True	NM_003385,NM_001099218	chr2,chr2	+,-	VSNL1,RAD51AP2	21612,-201
chr11:72976303-72977708	chr11	+	72976473	72977719	True	NM_014824,NM_176797,NM_176796,NM_176798,NM_004154	chr11,chr11,chr11,chr11,chr11	-,+,+,+,+	FCHSD2,P2RY6,P2RY6,P2RY6,P2RY6	-123330,-961,-961,3219,5527
chr20:42219225-42219562	chr20	+	42219332	42219584	True	NM_016004,NM_001008901	chr20,chr20	+,-	IFT52,GTSF1L	-6,136108
chr17:37352152-37353134	chr17	+	37352156	37353036	True	NM_199248,NM_000981,NM_000723,NM_199247	chr17,chr17,chr17,chr17	-,+,-,-	CACNB1,RPL19,CACNB1,CACNB1	915,3499,915,915
chr7:158935634-158936626	chr7	+	158935671	158936543	True	NR_024394	chr7	+	LOC154822	-134683
chr10:15411929-15412439	chr10	+	15411985	15412350	True	NM_183005,NM_001010924	chr10,chr10	+,-	RPP38,FAM171A1	-272854,758
chr21:44556368-44557044	chr21	+	44556445	44557088	True	NM_006758,NM_000394	chr21,chr21	-,+	U2AF1,CRYAA	-28757,32052
chr7:150726361-150726749	chr7	+	150726404	150726562	True	NM_173681,NM_007188	chr7,chr7	-,+	ATG9B,ABCB8	-4818,-953
chr20:31366871-31367781	chr20	+	31366919	31367281	True	NM_175850,NM_053041	chr20,chr20	+,-	DNMT3B,COMMD7	376,-35105
chr3:48669722-48670083	chr3	+	48669785	48670057	True	NM_001040454,NM_134263,NM_033629,NM_022911,NM_134426	chr3,chr3,chr3,chr3,chr3	-,-,+,-,-	SLC26A6,SLC26A6,TREX1,SLC26A6,SLC26A6	1272,2919,-162607,2919,2919
chr12:44141921-44142617	chr12	+	44142005	44142417	True	NM_001098615,NM_001114182	chr12,chr12	-,+	PUS7L,IRAK4	10196,10329
chr5:138861845-138862351	chr5	+	138861896	138862368	True	NM_198282,NM_003339	chr5,chr5	-,+	TMEM173,UBE2D2	29,78382
chr22:46644038-46644337	chr22	+	46644092	46644378	True	NM_207327,NM_017931	chr22,chr22	-,+	C22orf40,TTC38	1865,19482
chr17:7219639-7220095	chr17	+	7219700	7219888	True	NM_001970,NM_001143761,NM_004489,NM_001143760,NM_001143762	chr17,chr17,chr17,chr17,chr17	+,+,-,+,+	EIF5A,EIF5A,GPS2,EIF5A,EIF5A	-8895,-8463,-1042,-9433,-8057
chr13:25861695-25862330	chr13	+	25861831	25862329	True	NM_001008564,NM_004685	chr13,chr13	+,-	NUPL1,MTMR6	13336,-127
chr1:48694591-48695912	chr1	+	48694706	48695790	True	NR_026749,NM_001011547,NM_001135181	chr1,chr1,chr1	-,+,+	SKINTL,SLC5A9,SLC5A9	-46606,-6401,-6401
chr10:123350924-123352573	chr10	+	123351050	123352395	True	NM_000141,NM_022970,NM_001144916,NM_001144917,NM_001144914,NM_001144915,NM_206861,NM_001144913,NM_001144918,NM_001144919	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,-,-,+,-,-,-	FGFR2,FGFR2,FGFR2,FGFR2,FGFR2,FGFR2,TACC2,FGFR2,FGFR2,FGFR2	5628,5628,1428,5628,1137,3815,396293,1137,5628,5628
chr11:46407014-46407315	chr11	+	46407030	46407244	True	NM_000741,NM_002391,NM_001012334,NM_001012333	chr11,chr11,chr11,chr11	-,+,+,+	CHRM4,MDK,MDK,MDK	913,-3862,-4463,-3778
chr19:42349328-42349836	chr19	+	42349372	42349493	True	NM_173506,NM_001040283	chr19,chr19	-,+	LYPD4,DMRTC2	-864,-337
chr1:115300640-115300975	chr1	+	115300666	115301018	True	NM_007158,NM_001007553,NM_001130523,NM_003176	chr1,chr1,chr1,chr1	-,-,-,+	CSDE1,CSDE1,CSDE1,SYCP1	-42,-42,5,96436
chr11:67407992-67408422	chr11	+	67408086	67408354	True	NM_007103,NM_080658,NM_005995	chr11,chr11,chr11	+,-,-	NDUFV1,ACY3,TBX10	-33814,9826,-1055
chr4:113992611-113993639	chr4	+	113992646	113993685	True	NM_020977,NR_029857	chr4,chr4	+,-	ANK2,MIR302B	-21919,-422933
chr2:201731019-201731285	chr2	+	201731177	201731242	True	NR_027856,NM_001162407,NR_027855,NM_001136039,NM_004071	chr2,chr2,chr2,chr2,chr2	-,-,-,+,-	CLK1,CLK1,CLK1,NIF3L1,CLK1	-1710,-1893,-1710,22807,-1710
chr9:77643118-77643405	chr9	+	77643171	77643449	True	NM_012383,NM_152420	chr9,chr9	+,-	OSTF1,C9orf41	59948,-43
chr16:67751092-67752940	chr16	+	67751329	67752811	True	NR_027399,NR_027398,NM_030819,NM_001012984	chr16,chr16,chr16,chr16	-,-,-,+	GFOD2,GFOD2,GFOD2,C16orf86	514,514,514,-50677
chr15:90895279-90895481	chr15	+	90895289	90895425	True	NR_028287,NM_001004309	chr15,chr15	-,+	GABARAPL3,ZNF774	-2610,51
chr3:130613169-130613476	chr3	+	130613387	130613447	True	NM_001199185,NM_001199184,NM_001199183,NM_001199179,NM_001001485,NM_001001486,NM_001001487,NM_014065,NM_014382	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,+,+,+,-,+	ATP2C1,ATP2C1,ATP2C1,ATP2C1,ATP2C1,ATP2C1,ATP2C1,ASTE1,ATP2C1	-146,-533,-533,-603,-579,-4,-4,132249,-146
chr12:95465909-95466383	chr12	+	95466300	95466380	True	NM_001127362,NM_017599,NM_001032287,NM_003297	chr12,chr12,chr12,chr12	-,+,-,-	NR2C1,VEZT,NR2C1,NR2C1	1075,145141,1075,1075
chr22:37606983-37607547	chr22	+	37607000	37607546	True	NM_013385,NM_001051	chr22,chr22	+,-	CYTH4,SSTR3	70948,857
chr17:46126913-46128596	chr17	+	46127111	46128548	True	NM_003204,NM_016429	chr17,chr17	+,-	NFE2L1,COPZ2	-1476,-11959
chr13:47468562-47469937	chr13	+	47468574	47469966	True	NM_001164213,NM_000621,NM_001165947	chr13,chr13,chr13	+,-,-	LRCH1,HTR2A,HTR2A	-341336,1253,1253
chr19:11709822-11710440	chr19	+	11709879	11710364	True	NM_001111036,NM_145295	chr19,chr19	-,+	ACP5,ZNF627	-20078,-1696
chr1:9132875-9133156	chr1	+	9133097	9133205	True	NM_001215,NM_003039,NM_001135585	chr1,chr1,chr1	+,-,-	CA6,SLC2A5,SLC2A5	-127230,-3210,-3210
chr5:125711355-125711777	chr5	+	125711395	125711765	True	NM_001146319,NM_001182	chr5,chr5	+,-	GRAMD3,ALDH7A1	-15670,219373
chr11:71799360-71800034	chr11	+	71799472	71799901	True	NM_006185,NM_145309,NM_001145310,NR_026886,NM_001205138,NM_001145307,NM_001145308,NM_001145309	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,+,+,+,+,+,+,+	NUMA1,LRTOMT,LRTOMT,LRTOMT,LRTOMT,LRTOMT,LRTOMT,LRTOMT	-7899,-8147,-8142,-7831,-8147,-8147,-8147,-8142
chr12:111396168-111396496	chr12	+	111396179	111396521	True	NM_000432,NR_036513	chr12,chr12	-,+	MYL2,LOC100131138	-37775,-21824
chr13:110436424-110436641	chr13	+	110436463	110436689	True	NM_003749,NM_001846	chr13,chr13	-,+	IRS2,COL4A2	2275,522941
chr7:92077886-92078125	chr7	+	92077887	92078162	True	NM_000466,NM_021167	chr7,chr7	-,+	PEX1,GATAD1	79734,-1177
chrX:50647383-50648011	chrX	+	50647513	50647887	True	NM_005448,NR_027121,NR_003933	chrX,chrX,chrX	+,-,+	BMP15,SHROOM4,LOC347376	5847,-90469,544
chr8:143859714-143860028	chr8	+	143859743	143859985	True	NM_177477,NM_177476,NM_177457,NM_177458,NM_003695,NM_016647,NM_023946	chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,-,+,-	LYNX1,LYNX1,LYNX1,LYNX1,LY6D,C8orf55,LYNX1	-999,-1306,-103,-8497,8073,-51173,-104
chr2:77715352-77717230	chr2	+	77715532	77716839	True	NM_001134745,NM_198448	chr2,chr2	-,+	LRRTM4,REG3G	32726,1535986
chr17:47574345-47574601	chr17	+	47574350	47574432	True	NM_002634,NM_002507	chr17,chr17	-,+	PHB,NGFR	-82108,-1746
chr15:25492742-25492959	chr15	+	25492817	25492963	True	NR_003353,NR_003358,NM_130838,NR_003344,NR_003352,NR_003351,NR_003357,NR_003356,NR_003355,NR_003354,NR_003302,NR_003303,NR_003359	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,-,+,+,+,+,+,+,+,+,+,+	SNORD115-38,SNORD115-43,UBE3A,SNORD115-29,SNORD115-37,SNORD115-36,SNORD115-42,SNORD115-41,SNORD115-40,SNORD115-39,SNORD115-10,SNORD115-11,SNORD115-44	-7883,1381,157740,1381,-9735,1381,-376,-2243,-4107,-5975,-376,1381,3042
chr16:15244448-15244877	chr16	+	15244540	15244678	True	NM_015027,NR_037466	chr16,chr16	+,-	PDXDC1,MIR3180-4	-175758,4235
chr16:15244448-15244877	chr16	+	2181838	2181913	False	NM_001009944,NM_000296,NR_037467,NM_014353	chr16,chr16,chr16,chr16	-,-,-,+	PKD1,PKD1,MIR3180-5,RAB26	4037,4037,4268,16737
chr16:15244448-15244877	chr16	+	18491780	18491918	False	NR_036142,NR_003569,NR_036141,NR_036144	chr16,chr16,chr16,chr16	-,+,-,-	MIR3180-2,ABCC6P1,MIR3180-1,MIR3180-3	4260,90651,4264,4264
chr16:15244448-15244877	chr16	-	15009351	15009426	False	NR_036142,NR_023387,NR_036141,NR_036144	chr16,chr16,chr16,chr16	+,-,+,+	MIR3180-2,ABCC6P2,MIR3180-1,MIR3180-3	-4322,-90792,-4326,-4326
chr16:15244448-15244877	chr16	-	16407943	16408081	False	NR_036447,NR_036142,NR_036141,NM_001079528,NR_036144	chr16,chr16,chr16,chr16,chr16	+,+,+,-,+	PKD1P1,MIR3180-2,MIR3180-1,ABCC6,MIR3180-3	3384,-4262,-4266,-90615,-4266
chrX:70364829-70365105	chrX	+	70364975	70365081	True	NM_001166660,NM_181303,NM_018977,NM_000206	chrX,chrX,chrX,chrX	+,+,+,-	NLGN3,NLGN3,NLGN3,IL2RG	-345,-345,-345,-33494
chr7:142744522-142745693	chr7	+	142744521	142745397	True	NR_002140,NM_001001667	chr7,chr7	-,+	OR6W1P,OR6V1	15535,4040
chr9:124504630-124505909	chr9	+	124504777	124505872	True	NR_003191,NM_138709	chr9,chr9	-,+	GGTA1,DAB2IP	-242471,-47
chrX:15327332-15328829	chrX	+	15327401	15328740	True	NM_001201583,NM_080873,NM_001012428,NM_203281	chrX,chrX,chrX,chrX	-,-,-,+	ASB11,ASB11,ASB11,BMX	5066,5066,4001,190159
chr5:137420715-137421398	chr5	+	137420937	137421284	True	NM_016603,NM_058244	chr5,chr5	-,+	FAM13B,WNT8A	-52135,-1230
chr20:1516761-1517037	chr20	+	1516760	1517037	True	NM_014723,NM_178460	chr20,chr20	+,-	SNPH,SIRPD	-269851,21365
chr12:69140616-69141140	chr12	+	69140656	69140981	True	NM_018656,NR_033335	chr12,chr12	+,-	SLC35E3,SNORA70G	-778,-119501
chr19:55453546-55454234	chr19	+	55453654	55454166	True	NM_206828,NM_139176,NM_001174081,NM_001127255	chr19,chr19,chr19,chr19	-,-,+,-	NLRP7,NLRP7,NLRP2,NLRP7	4757,4757,22485,4757
chr3:9854121-9854659	chr3	+	9854366	9854682	True	NR_037162,NM_133480,NM_001025930	chr3,chr3,chr3	+,-,+	TTLL3,TADA3,TTLL3	-2785,-19946,-2785
chr3:124603972-124604547	chr3	+	124604170	124604566	True	NM_002213,NR_033437	chr3,chr3	-,+	ITGB5,UMPS	1628,-155015
chr5:133988643-133989567	chr5	+	133989222	133989546	True	NM_021982,NM_016103	chr5,chr5	+,-	SEC24A,SAR1B	-4806,-20689
chr11:16327766-16327981	chr11	+	16327898	16327990	True	NM_001145819,NM_014267	chr11,chr11	-,+	SOX6,C11orf58	96475,432157
chr17:73719903-73720207	chr17	+	73719988	73720250	True	NM_000154,NM_000213,NM_001005619,NM_001005731	chr17,chr17,chr17,chr17	-,+,+,+	GALK1,ITGB4,ITGB4,ITGB4	41080,-2523,525,-2523
chr8:38241735-38243002	chr8	+	38241779	38242887	True	NM_017778,NM_001199660,NM_023034,NM_001199659,NM_144652	chr8,chr8,chr8,chr8,chr8	-,+,-,+,+	WHSC1L1,LETM2,WHSC1L1,LETM2,LETM2	-1989,1761,-1989,1071,1071
chr2:75872958-75873980	chr2	+	75873141	75873927	True	NM_014763,NM_001201334	chr2,chr2	+,-	MRPL19,C2orf3	-19,63855
chr20:1873956-1874177	chr20	+	1873961	1874205	True	NM_080792,NM_001190892,NM_001040023,NM_001040022	chr20,chr20,chr20,chr20	+,-,+,+	SIRPA,PDYN,SIRPA,SIRPA	1219,99297,1620,607
chr11:46409800-46410668	chr11	+	46409932	46410710	True	NM_000741,NM_002391,NM_001012334,NM_001012333	chr11,chr11,chr11,chr11	-,+,+,+	CHRM4,MDK,MDK,MDK	-1825,-6777,-7378,-6693
chr6:7543450-7544336	chr6	+	7543535	7544262	True	NM_004415,NM_001008844,NM_001170693	chr6,chr6,chr6	+,+,-	DSP,DSP,CAGE1	-1723,-1723,-153593
chr1:171808698-171809976	chr1	+	171808796	171809984	True	NR_033704,NM_001136127,NM_015569	chr1,chr1,chr1	-,+,+	VAMP4,DNM3,DNM3	-97417,636,636
chr9:100886386-100887139	chr9	+	100886715	100887181	True	NM_018946,NM_014788,NM_033220,NM_033219	chr9,chr9,chr9,chr9	+,-,-,-	NANS,TRIM14,TRIM14,TRIM14	-67814,-5235,-5227,-5235
chr11:124545253-124546503	chr11	+	124545252	124546532	True	NM_017425,NM_170601,NM_001199922	chr11,chr11,chr11	+,-,-	SPA17,SIAE,SIAE	-1563,-1475,187
chr5:133305089-133306714	chr5	+	133305308	133306589	True	NM_003202,NM_020199	chr5,chr5	+,-	TCF7,C5orf15	143812,-902
chr8:102505035-102505528	chr8	+	102505138	102505512	True	NM_016096,NM_024915	chr8,chr8	-,+	ZNF706,GRHL2	-287178,-523
chr16:30959507-30959791	chr16	+	30959577	30959751	True	NM_014712,NM_152288,NR_024348	chr16,chr16,chr16	+,+,-	SETD1A,ORAI3,FBXL19-AS1	8863,653,-24987
chr6:111584327-111585712	chr6	+	111585017	111585629	True	NM_153369,NR_002932	chr6,chr6	+,-	KIAA1919,GSTM2P1	-4586,-216260
chr2:905951-906954	chr2	+	906115	907003	True	NM_018968,NR_033880	chr2,chr2	+,-	SNTG2,LOC339822	39550,-42003
chr11:107795635-107797052	chr11	+	107795669	107796759	True	NM_017515,NM_017516	chr11,chr11	-,+	SLC35F2,RAB39	-65755,2517
chr4:77293013-77294295	chr4	+	77293274	77294344	True	NM_001042784,NM_020859	chr4,chr4	-,+	CCDC158,SHROOM3	34164,61908
chr19:44809594-44810519	chr19	+	44809647	44810537	True	NM_004234,NM_181756	chr19,chr19	-,+	ZNF235,ZNF233	-469,-45622
chr10:135239055-135239272	chr10	+	135239259	135239319	True	NR_002934,NM_001012508	chr10,chr10	+,-	LOC619207,SPRN	28112,-1138
chr10:135239055-135239272	chr10	+	135384054	135384114	False	NM_001143764,NR_033789,NM_001143763,NM_130784,NM_000773	chr10,chr10,chr10,chr10,chr10	-,-,-,-,+	SYCE1,SPRNP1,SYCE1,SYCE1,CYP2E1	-4916,-592,-4916,-1178,-43238
chr1:75596347-75596795	chr1	+	75596405	75596655	True	NM_001001933,NM_001889	chr1,chr1	+,-	LHX8,CRYZ	-2343,-397313
chr11:57473048-57473890	chr11	+	57473235	57473605	True	NM_153450,NM_015959,NM_001144012,NR_037646,NR_037645,NR_026593	chr11,chr11,chr11,chr11,chr11,chr11	-,+,+,+,+,+	MED19,TMX2,TMX2,TMX2-CTNND1,TMX2,TMX2	6125,6389,6389,6389,6389,6389
chr19:19975088-19975657	chr19	+	19975286	19975472	True	NM_021047,NM_001145404	chr19,chr19	+,-	ZNF253,ZNF506	1241,-42726
chr3:148450825-148452590	chr3	+	148450941	148452635	True	NM_003071,NM_032049	chr3,chr3	-,+	HLTF,AGTR1	351756,-3028
chr16:3070672-3070914	chr16	+	3070713	3070787	True	NM_001142350,NM_024339,NM_017885,NM_001002017,NM_016639,NM_021195,NM_020982,NM_001002018	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,-,-,+,-,+,-	THOC6,THOC6,HCFC1R1,HCFC1R1,TNFRSF12A,CLDN6,CLDN9,HCFC1R1	3244,3244,3550,3550,-451,-2525,-8307,3550
chr6:14738030-14739232	chr6	+	14738124	14739199	True	NM_001031713,NM_004973,NM_032122	chr6,chr6,chr6	-,+,-	CCDC90A,JARID2,DTNBP1	-923335,507327,924153
chr17:57787449-57788257	chr17	+	57787681	57788127	True	NM_030938,NM_016077	chr17,chr17	+,-	VMP1,PTRH2	-2870,-2825
chr1:27115766-27117326	chr1	+	27115974	27117232	True	NM_001202554,NM_018066,NM_017837	chr1,chr1,chr1	+,-,+	PIGV,GPN2,PIGV	-1347,99694,-1572
chr7:17016562-17017320	chr7	+	17016606	17017344	True	NM_176813,NM_014399	chr7,chr7	-,+	AGR3,TSPAN13	-94993,-223306
chr12:104607067-104607430	chr12	+	104607377	104607437	True	NM_006166,NM_001093771	chr12,chr12	-,+	NFYB,TXNRD1	-75337,2121
chr9:5010479-5011719	chr9	+	5010758	5011746	True	NM_007179,NM_004972	chr9,chr9	-,+	INSL6,JAK2	173929,-25579
chr1:175044725-175046645	chr1	+	175044819	175046421	True	NR_037606,NM_022093	chr1,chr1	-,+	MRPS14,TNN	-52228,-7876
chr5:176899609-176899902	chr5	+	176899648	176899854	True	NM_001174102,NM_080881,NM_004395	chr5,chr5,chr5	+,-,-	PRR7,DBN1,DBN1	-24373,67,890
chr8:143760253-143761421	chr8	+	143760264	143761384	True	NR_033343,NM_003724,NM_005672,NM_001077527	chr8,chr8,chr8,chr8	+,-,+,-	PSCA,JRK,PSCA,JRK	-8589,-8863,489,-8863
chr4:148427097-148428552	chr4	+	148427466	148428575	True	NR_028596,NM_138364	chr4,chr4	+,-	EDNRA,PRMT10	-25450,176755
chr7:56133745-56134262	chr7	+	56133837	56134130	True	NM_001130069,NM_004577,NM_001042469,NM_001146333,NM_015411,NR_002957,NM_001042470	chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,-,+,+,+,+,+	SUMF2,PSPH,SUMF2,SUMF2,SUMF2,SNORA15,SUMF2	-1984,-14569,-1984,-1984,-1984,-5738,-1984
chr22:35868486-35868960	chr22	+	35868618	35869006	True	NM_005368,NM_014310	chr22,chr22	-,+	MB,RASD2	144428,68345
chr17:3380905-3381196	chr17	+	3381128	3381206	True	NM_001170696,NM_001170697,NM_001170695,NM_001170698,NM_001170699,NM_000049,NM_032598,NM_001128085	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,+,-,+	SPATA22,SPATA22,SPATA22,SPATA22,SPATA22,ASPA,SPATA22,ASPA	-5986,-6002,-5986,-6029,-6061,-1889,-6087,-3781
chr15:25312452-25313297	chr15	+	25312490	25313282	True	NR_003322,NR_003317,NR_003320,NR_003321,NR_003326,NR_003327,NR_003324,NR_003323,NR_003325,NR_003319,NR_003318,NM_130838	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,+,+,-	SNORD116-7,SNORD116-2,SNORD116-5,SNORD116-6,SNORD116-11,SNORD116-12,SNORD116-9,SNORD116-8,SNORD116-10,SNORD116-4,SNORD116-3,UBE3A	-17,-2369,-17,-2369,7792,8914,4970,2295,5977,-7857,4970,337421
chrX:51559369-51560532	chrX	+	51560022	51560556	True	NM_001005332,NR_033773	chrX,chrX	+,-	MAGED1,LOC441495	-13925,-134575
chr13:30881482-30881701	chr13	+	30881542	30881608	True	NM_005800,NM_032116,NM_001014380	chr13,chr13,chr13	+,-,-	USPL1,KATNAL1,KATNAL1	310221,26,-379
chr18:60194654-60195686	chr18	+	60194834	60195365	True	NM_176787,NM_017742	chr18,chr18	-,+	PIGN,ZCCHC2	-340545,-4227
chr22:41077331-41077610	chr22	+	41077461	41077657	True	NM_020831,NM_005297	chr22,chr22	-,+	MKL1,MCHR1	-44771,-2330
chr12:122017795-122018187	chr12	+	122018062	122018147	True	NM_032590,NM_032790,NM_001005366	chr12,chr12,chr12	-,+,-	KDM2B,ORAI1,KDM2B	824,46307,268
chr22:21355009-21355496	chr22	+	21355141	21355493	True	NM_030573,NM_001008695,NR_027052,NR_027051	chr22,chr22,chr22,chr22	-,-,+,+	THAP7,THAP7,FLJ39582,FLJ39582	961,961,717,717
chr19:573122-573450	chr19	+	573271	573499	True	NM_198589,NM_005035,NM_001728,NM_198591	chr19,chr19,chr19,chr19	+,-,+,+	BSG,POLRMT,BSG,BSG	-785,60119,-785,-1997
chr1:11120379-11121250	chr1	+	11120550	11121246	True	NM_003132,NM_007375	chr1,chr1	-,+	SRM,TARDBP	-459,-47924
chr4:146100981-146101183	chr12	-	3948533	3948611	False	NM_019854,NM_020367	chr12,chr12	+,-	PRMT8,PARP11	-348159,34047
chr4:146100981-146101183	chr4	+	146100981	146101059	True	NM_002940,NM_017493,NM_001102653	chr4,chr4,chr4	+,-,-	ABCE1,OTUD4,OTUD4	-81876,-5085,-149
chr7:30429430-30430109	chr7	+	30429587	30430052	True	NM_006092,NR_002186	chr7,chr7	-,+	NOD1,DKFZP586I1420	88394,-19973
chr3:120068698-120069746	chr3	+	120068702	120069486	True	NM_001099678,NM_001168331	chr3,chr3	-,+	LRRC58,NDUFB4	-516,245641
chr5:34913028-34914602	chr5	+	34913300	34914443	True	NR_026591,NM_018321,NM_002853	chr5,chr5,chr5	-,+,-	RAD1,BRIX1,RAD1	1348,1376,1397
chr6:54181879-54183631	chr6	+	54181913	54183616	True	NM_014464,NM_001003760	chr6,chr6	+,-	TINAG,KLHL31	-8761,-651407
chr4:69071538-69073360	chr4	+	69071769	69072895	True	NR_015446,NM_001129907	chr4,chr4	+,-	FTLP10,TMPRSS11BNL	-23810,10960
chr6:36838559-36840474	chr6	+	36838792	36840282	True	NM_152734,NM_016059	chr6,chr6	+,-	C6orf89,PPIL1	13357,2573
chr19:21332896-21334366	chr19	+	21333006	21334404	True	NM_133473,NM_021269	chr19,chr19	+,-	ZNF431,ZNF708	-8217,177858
chr9:98271596-98272038	chr9	+	98271609	98272075	True	NM_001010895,NM_000264,NM_001083602,NM_001083603,NM_001083604,NM_001083605,NM_001083606,NM_001083607	chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9	+,-,-,-,-,-,-,-	C9orf102,PTCH1,PTCH1,PTCH1,PTCH1,PTCH1,PTCH1,PTCH1	365824,-778,7222,7222,-1287,-1287,-1910,-2128
chr6:3444935-3445180	chr6	+	3444949	3445139	True	NM_021945,NM_001128592	chr6,chr6	-,+	SLC22A23,PSMG4	129,-185841
chr7:44925497-44926229	chr7	+	44925695	44926083	True	NM_033224,NM_021130	chr7,chr7	-,+	PURB,PPIA	-735,-89505
chr7:120480184-120481823	chr7	+	120480320	120481866	True	NM_198267,NM_012338	chr7,chr7	+,-	ING3,TSPAN12	108950,16367
chrX:48692813-48693361	chrX	+	48693061	48693375	True	NM_013271,NM_181532	chrX,chrX	-,+	PCSK1N,ERAS	635,-5829
chr19:37178941-37179429	chr19	+	37178989	37179271	True	NM_152603,NM_153257	chr19,chr19	+,-	ZNF567,ZNF461	1030,-21250
chr12:123237010-123237227	chr12	+	123237027	123237203	True	NM_032554,NM_003677	chr12,chr12	-,+	GPR81,DENR	-21898,167
chr11:63998436-63998904	chr11	+	63998439	63998695	True	NM_031472,NM_001160389,NM_001033678,NM_032344,NM_005528,NM_004470,NM_003377,NM_001160392,NM_001160393,NM_001160390,NM_001128613,NM_001128612,NM_001135208	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,+,+,+,+,-,-,-,+,+,+	TRPT1,TRPT1,TRPT1,NUDT22,DNAJC4,FKBP2,VEGFB,TRPT1,TRPT1,TRPT1,NUDT22,NUDT22,FKBP2	-4713,-4713,-4713,-4752,-737,9717,3570,-4713,-5098,-4713,-4752,-4752,9908
chr8:143915818-143916150	chr8	+	143915943	143916071	True	NM_002066,NM_000497	chr8,chr8	+,-	GML,CYP11B1	145,45215
chr1:150981605-150982019	chr1	+	150981620	150981928	True	NM_001040217,NM_021222,NM_001163258,NM_001163259,NM_018379,NM_001163260	chr1,chr1,chr1,chr1,chr1,chr1	-,+,-,-,-,-	FAM63A,PRUNE,FAM63A,FAM63A,FAM63A,FAM63A	-2235,-698,-766,-2347,-766,-2347
chr3:136702223-136702554	chr3	+	136702369	136702603	True	NM_144717,NM_005862	chr3,chr3	+,-	IL20RB,STAG1	-25724,-231124
chr1:99425483-99426382	chr1	+	99425516	99426356	True	NR_033940,NM_001010861	chr1,chr1	+,-	LOC100129620,LPPR5	43475,44143
chr20:62132177-62132934	chr20	+	62132444	62132974	True	NM_024299,NM_001958	chr20,chr20	+,-	PPDPF,EEF1A2	19158,-1939
chr22:29996614-29997273	chr22	+	29996910	29997190	True	NM_016418,NM_003634,NM_181825,NM_181832,NM_181833,NM_181830,NM_181831,NM_000268,NM_181829,NM_181828	chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22	+,-,+,+,+,+,+,+,+,+	NF2,NIPSNAP1,NF2,NF2,NF2,NF2,NF2,NF2,NF2,NF2	2354,-19584,2354,2354,2354,2354,2354,2354,2354,2354
chr15:31284898-31285413	chr15	+	31284947	31285403	True	NM_017762,NM_014967	chr15,chr15	-,+	MTMR10,FAN1	-1140,-88928
chr4:6764685-6765397	chr4	+	6764852	6765394	True	NM_001100590,NM_203462	chr4,chr4	+,-	KIAA0232,MRFAP1L1	19064,-53246
chr14:104553541-104553925	chr14	+	104553559	104553805	True	NM_004894,NM_001080464	chr14,chr14	-,+	C14orf2,ASPG	-165656,-1587
chr16:28874927-28875166	chr16	+	28874974	28875196	True	NM_001145812,NM_001145797,NM_001145796,NM_001145795,NM_015503,NM_003321	chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,-	SH2B1,SH2B1,SH2B1,SH2B1,SH2B1,TUFM	99,31,31,31,117,-17245
chr19:11707946-11708254	chr19	+	11708085	11708181	True	NM_001111036,NM_145295	chr19,chr19	-,+	ACP5,ZNF627	-18284,53
chr1:1261362-1261674	chr1	+	1261401	1261631	True	NM_001029885,NM_152228,NM_017871	chr1,chr1,chr1	+,+,-	GLTPD1,TAS1R3,CPSF3L	-1309,5094,-1355
chr1:222805997-222806519	chr1	+	222806211	222806561	True	NM_198551,NM_005681	chr1,chr1	+,-	MIA3,TAF1A	-14832,-42936
chr11:117105036-117106003	chr11	+	117105059	117105686	True	NM_004716,NM_207343,NM_001077239	chr11,chr11,chr11	-,+,+	PCSK7,RNF214,RNF214	-2248,-1706,-1658
chr13:45562409-45563308	chr13	+	45562607	45563197	True	NM_012345,NM_018559	chr13,chr13	-,+	NUFIP1,KIAA1704	466,489
chr9:20621850-20622062	chr9	+	20621853	20621993	True	NM_004529,NM_017794	chr9,chr9	-,+	MLLT3,KIAA1797	571,36315
chr1:17045375-17045828	chr1	+	17045375	17045667	True	NR_026567,NR_037446	chr1,chr1	-,+	ESPNP,MIR3675	1035,-37676
chr3:128838487-128839144	chr3	+	128838534	128839138	True	NM_198490,NM_001204888,NM_001204885,NM_001204884,NM_001204887,NM_001204886,NM_001204883,NM_000174	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,-,-,-,+	RAB43,RAB43,RAB43,RAB43,RAB43,RAB43,RAB43,GP9	1559,1559,1677,1769,1559,1559,1905,-58940
chr21:43135947-43136893	chr21	+	43136042	43136644	True	NR_027272,NR_024028	chr21,chr21	-,+	C21orf129,NCRNA00112	-107,-49
chr19:4912246-4913058	chr19	+	4912289	4913099	True	NM_001080523,NM_001048201,NM_013282	chr19,chr19,chr19	-,+,+	ARRDC5,UHRF1,UHRF1	-9410,-2830,-1774
chr17:73180117-73181039	chr17	+	73180185	73181043	True	NM_001005849,NM_024844,NM_006937	chr17,chr17,chr17	-,+,-	SUMO2,NUP85,SUMO2	-1087,20553,-1087
chr2:102925906-102926726	chr2	+	102926211	102926517	True	NM_016232,NM_032718	chr2,chr2	+,-	IL1RL1,MFSD9	1444,426870
chr11:57521020-57521378	chr11	+	57521033	57521102	True	NM_001085468,NM_001145101,NM_001331,NM_001085459,NM_001085458,NM_001085462,NM_001085463,NM_001085460,NM_001085461,NM_001085466,NM_001085467,NM_001085464,NM_001085465,NM_001085469	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,-,+,+,+,+,+,+,+,+,+,+,+,+	CTNND1,BTBD18,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1	8131,-1780,8131,8131,8131,8131,8131,8131,8131,8131,8131,8131,8131,8131
chr14:55602441-55603460	chr14	+	55602577	55603496	True	NM_002306,NR_003225,NM_001146015,NM_001177388	chr14,chr14,chr14,chr14	+,+,-,+	LGALS3,LGALS3,DLGAP5,LGALS3	-6697,204,54957,-6697
chr6:80728195-80728974	chr6	+	80728416	80729002	True	NM_022726,NM_003318	chr6,chr6	-,+	ELOVL4,TTK	-71101,-14157
chr1:217264066-217264289	chr1	+	217264208	217264326	True	NM_138796,NM_206595,NM_206594	chr1,chr1,chr1	+,-,-	SPATA17,ESRRG,ESRRG	540368,-1232,-1232
chr3:49909583-49910099	chr3	+	49909620	49910140	True	NM_001167582,NM_024046	chr3,chr3	+,-	RBM6,CAMKV	67336,-2251
chr20:13956939-13957562	chr20	+	13957064	13957584	True	NM_080676,NM_025229	chr20,chr20	+,-	MACROD2,SEL1L2	18561,13728
chr8:38091369-38092377	chr8	+	38091560	38092110	True	NM_001164232,NM_015214,NM_001164234,NM_001102559	chr8,chr8,chr8,chr8	+,+,+,-	DDHD2,DDHD2,DDHD2,PPAPDC1B	-2151,-2613,-2613,34684
chr1:67266347-67268051	chr1	+	67266389	67267845	True	NM_005478,NM_152665	chr1,chr1	-,+	INSL5,TCTEX1D1	-139,-48300
chr5:179070654-179070896	chr5	+	179070738	179070926	True	NM_001024649,NM_001142306	chr5,chr5	+,-	CANX,C5orf60	55003,1171
chr11:393948-394275	chr11	+	394052	394324	True	NM_007183,NM_001135054	chr11,chr11	+,-	PKP3,SIGIRR	-36,20725
chr4:106391958-106393439	chr4	+	106392007	106393479	True	NR_003586,NM_176869,NM_006903,NM_176867,NM_176866	chr4,chr4,chr4,chr4,chr4	+,-,-,-,-	EEF1A1P9,PPA2,PPA2,PPA2,PPA2	12383,1798,1798,1798,1798
chr18:77749850-77750824	chr18	+	77750000	77750623	True	NM_001136180,NM_006701	chr18,chr18	+,-	HSBP1L1,TXNL4A	-25469,-1468
chr1:82328814-82330427	chr1	+	82328821	82330175	True	NM_012302,NM_024686	chr1,chr1	+,-	LPHN2,TTLL7	-62790,2134722
chr12:149493-151057	chr12	+	149840	150933	True	NM_001170738,NR_026823	chr12,chr12	+,-	IQSEC3,FAM138D	25115,-428
chr12:149493-151057	chr12	-	67119	67179	False	NR_028269,NR_026823	chr12,chr12	+,-	LOC100288778,FAM138D	20804,82283
chr12:149493-151057	chr2	-	114334472	114334532	False	NR_026821,NR_024077,NR_024005	chr2,chr2,chr2	+,+,-	FAM138B,WASH2P,DDX11L2	426,6697,24671
chr2:97358767-97359079	chr2	+	97358931	97359077	True	NM_001142292,NM_001113382	chr2,chr2	-,+	LMAN2L,FER1L5	46786,-50408
chr12:974404-976009	chr12	+	974417	976011	True	NM_134424,NM_213655	chr12,chr12	-,+	RAD52,WNK1	82909,-112381
chr13:45917882-45919140	chr13	+	45918218	45919167	True	NR_002967,NM_003295,NR_024458	chr13,chr13,chr13	-,-,+	SNORA31,TPT1,LOC100190939	-6474,-2921,-2796
chrY:20715248-20716673	chrY	+	20715261	20716704	True	NM_033108,NM_152584,NR_003509,NR_001530,NM_001001877,NR_003510,NM_153716	chrY,chrY,chrY,chrY,chrY,chrY,chrY	+,+,+,-,+,+,+	HSFY1,HSFY1,HSFY2,TTTY9A,HSFY2,HSFY1,HSFY2	-6738,-6735,-6755,35753,-6735,-6735,-6755
chrY:20715248-20716673	chrY	-	20927469	20928912	False	NM_033108,NR_002159,NM_152584,NR_003509,NM_001001877,NR_003510,NM_153716	chrY,chrY,chrY,chrY,chrY,chrY,chrY	-,+,-,-,-,-,-	HSFY1,TTTY9B,HSFY1,HSFY2,HSFY2,HSFY1,HSFY2	6742,-35752,6739,6759,6739,6739,6759
chr21:37540400-37542112	chr21	+	37540692	37542158	True	NM_017438,NM_005128	chr21,chr21	-,+	SETD4,DOPEY2	-107876,-3904
chr16:22219548-22220046	chr16	+	22219883	22219947	True	NM_001802,NM_013302	chr16,chr16	-,+	CDR2,EEF2K	166041,-2351
chr7:99766201-99766647	chr7	+	99766317	99766575	True	NM_024637,NM_152742,NM_012447	chr7,chr7,chr7	-,-,+	GAL3ST4,GPC2,STAG3	56,8465,8962
chr1:228869289-228870819	chr1	+	228869506	228870653	True	NM_033445,NM_021205	chr1,chr1	-,+	HIST3H2A,RHOU	-223946,170
chr17:54265279-54266622	chr17	+	54265471	54266344	True	NM_153228,NM_001099640	chr17,chr17	+,-	ANKFN1,TMEM100	-34694,-455989
chr7:154006597-154007120	chr7	+	154006620	154007100	True	NM_001936,NM_007349	chr7,chr7	+,-	DPP6,PAXIP1	-4324,787632
chr17:44923450-44925237	chr17	+	44923521	44924833	True	NM_003396,NM_030753	chr17,chr17	+,-	WNT9B,WNT3	4134,-27439
chr16:57662524-57663208	chr16	+	57662699	57663143	True	NM_001145771,NM_001145770,NM_001145773,NM_001145772,NM_033212,NM_201525,NM_201524,NM_005682	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,-,+,+,+	GPR56,GPR56,GPR56,GPR56,CCDC102A,GPR56,GPR56,GPR56	-331,-8840,-331,-331,-92222,-331,-331,-8840
chr17:18588143-18588792	chr17	+	18588269	18588821	True	NM_001145045,NM_001037330	chr17,chr17	-,+	ZNF286B,TRIM16L	-2697,36580
chr17:18588143-18588792	chr17	-	15599784	15600336	False	NM_006470,NM_001130842,NM_020652	chr17,chr17,chr17	-,+,+	TRIM16,ZNF286A,ZNF286A	-13591,2554,2554
chr12:113622598-113622841	chr12	+	113622637	113622791	True	NM_024072,NM_001111322,NM_032848	chr12,chr12,chr12	-,-,+	DDX54,DDX54,C12orf52	543,543,763
chr1:95297449-95298825	chr1	+	95297746	95298811	True	NM_152369,NM_001839	chr1,chr1	+,-	SLC44A3,CNN3	-11708,93981
chr3:150336930-150337376	chr3	+	150337336	150337420	True	NM_016275,NM_014445	chr3,chr3	+,-	SELT,SERP1	-16323,-72908
chr1:202314465-202316246	chr1	+	202314925	202316246	True	NM_001167858,NM_002481,NM_014176,NM_001167857	chr1,chr1,chr1,chr1	+,+,-,+	PPP1R12B,PPP1R12B,UBE2T,PPP1R12B	1583,1583,-3831,1583
chr1:11938301-11938598	chr1	+	11938332	11938634	True	NM_002521,NR_037806	chr1,chr1	-,+	NPPB,NPPA-AS1	-19340,-38007
chr5:65465716-65466538	chr5	+	65465944	65466285	True	NR_028474,NM_139168	chr5,chr5	-,+	LOC100303749,SREK1	-224543,-25332
chr3:10804789-10805047	chr3	+	10804831	10805029	True	NR_027102,NM_014229	chr3,chr3	-,+	LOC285370,SLC6A11	898,52887
chr20:2907595-2908578	chr20	+	2908167	2908241	True	NM_022760,NM_080841	chr20,chr20	-,+	FAM113A,PTPRA	-86835,-4365
chr10:80828180-80828572	chr10	+	80828358	80828586	True	NR_024429,NR_015429,NR_024431,NM_020338	chr10,chr10,chr10,chr10	-,-,-,+	LOC283050,LOC283050,LOC283050,ZMIZ1	-1153,-1153,-1153,205
chr1:151017957-151019132	chr1	+	151018181	151019050	True	NM_138278,NM_017860,NM_001159642,NM_001038707	chr1,chr1,chr1,chr1	+,+,+,-	BNIPL,C1orf56,BNIPL,CDC42SE1	-9211,1208,-9211,13126
chr7:44887786-44888305	chr7	+	44887902	44888252	True	NM_201436,NM_012412,NM_201516,NM_201517,NM_021130,NM_138635	chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,+,-	H2AFV,H2AFV,H2AFV,H2AFV,PPIA,H2AFV	-177,-177,-177,-177,-51712,-177
chr6:146243083-146244686	chr6	+	146243133	146244599	True	NM_001042683,NM_000838	chr6,chr6	-,+	SHPRH,GRM1	40685,104182
chr1:162367480-162367870	chr1	+	162367541	162367917	True	NM_001085375,NM_053282	chr1,chr1	+,-	C1orf226,SH2D1B	-16079,14061
chr12:113840469-113840670	chr12	+	113840508	113840618	True	NM_138432,NM_006843	chr12,chr12	+,-	SDSL,SDS	19597,1124
chr20:3147137-3147559	chr20	+	3147141	3147549	True	NM_014731,NM_014948,NM_199415,NM_021826,NM_033453	chr20,chr20,chr20,chr20,chr20	-,-,-,-,+	ProSAPiP1,UBOX5,UBOX5,FASTKD5,ITPA	1708,-6601,-6601,-6609,42506
chr2:145044924-145045512	chr2	+	145045131	145045290	True	NM_001006636,NR_033870	chr2,chr2	-,+	GTDC1,DKFZp686O1327	6821,380243
chr11:62557440-62558103	chr11	+	62557513	62558137	True	NM_199337,NM_001080501	chr11,chr11	+,-	TMEM179B,TMEM223	-2690,1399
chr16:1019046-1019669	chr16	+	1019367	1019669	True	NR_033646,NM_014587,NM_022773	chr16,chr16,chr16	-,+,-	LMF1,SOX8,LMF1	1365,12138,1365
chr1:65731779-65732738	chr1	+	65731888	65732546	True	NR_029516,NM_014787	chr1,chr1	-,+	MIR101-1,DNAJC6	-207697,-1509
chr17:8869252-8869583	chr17	+	8869405	8869485	True	NM_004822,NM_001142633	chr17,chr17	+,-	NTN1,PIK3R5	55373,-381
chr13:45165850-45167256	chr13	+	45166018	45167240	True	NM_001010897,NM_183422	chr13,chr13	+,-	SERP2,TSC22D1	-218091,-15317
chr17:37415956-37417316	chr17	+	37416319	37417141	True	NM_198993,NM_000981	chr17,chr17	-,+	STAC2,RPL19	-34279,-59847
chr6:89926200-89926952	chr6	+	89926205	89926973	True	NM_001010853,NM_002042	chr6,chr6	+,-	PM20D2,GABRR1	-70487,573
chr17:76623979-76624748	chr17	+	76624302	76624728	True	NM_173628,NM_024419	chr17,chr17	-,+	DNAH17,PGS1	-50826,-249618
chr1:90007192-90009145	chr1	+	90007391	90008998	True	NM_015350,NR_033981	chr1,chr1	+,-	LRRC8B,FLJ27354	15273,89512
chr21:37436145-37437127	chr21	+	37436427	37436951	True	NM_017438,NM_001007259,NM_001757	chr21,chr21,chr21	-,-,+	SETD4,SETD4,CBR1	-3611,-3816,5333
chr16:74803612-74805391	chr16	+	74803613	74804987	True	NM_024306,NM_032268	chr16,chr16	-,+	FA2H,ZNRF1	3792,227927
chrX:129524043-129524887	chrX	+	129524180	129524611	True	NM_016024,NM_178471	chrX,chrX	+,-	RBMX2,GPR119	11331,-4669
chr22:39152473-39152756	chr22	+	39152472	39152804	True	NM_015374,NM_001199580,NM_001199579,NM_004286	chr22,chr22,chr22,chr22	-,-,-,+	SUN2,SUN2,SUN2,GTPBP1	-448,-1005,-448,-50717
chr11:1143213-1143807	chr11	+	1143299	1143773	True	NM_002457,NM_005961	chr11,chr11	+,-	MUC2,MUC6	-68475,-106593
chr4:84035459-84036994	chr4	+	84035547	84036826	True	NM_016619,NM_001130716,NM_001130715,NM_016129	chr4,chr4,chr4,chr4	-,-,-,+	PLAC8,PLAC8,PLAC8,COPS4	6,-4535,6,-79360
chr18:74521215-74521720	chr18	+	74521510	74521700	True	NM_007345,NM_001025081	chr18,chr18	+,-	ZNF236,MBP	14415,207405
chr8:49647516-49647985	chr8	+	49647616	49647868	True	NM_001007176,NR_024605,NM_024593,NM_001142857	chr8,chr8,chr8,chr8	+,-,-,-	C8orf22,EFCAB1,EFCAB1,EFCAB1	337034,52,52,52
chr11:50257601-50257921	chr11	+	50257666	50257930	True	NR_024504,NR_003034	chr11,chr11	+,-	LOC646813,LOC441601	110387,-33
chr16:31214605-31215328	chr16	+	31214612	31215270	True	NM_145182,NM_001008274,NM_013258	chr16,chr16,chr16	-,+,-	PYCARD,TRIM72,PYCARD	-515,10071,-515
chr3:111467527-111469505	chr3	+	111467845	111469408	True	NM_024508,NM_001134437	chr3,chr3	-,+	ZBED2,PHLDB2	-153679,-16578
chr17:77750380-77750957	chr17	+	77750402	77750992	True	NM_005189,NM_020649,NM_032647	chr17,chr17,chr17	+,-,+	CBX2,CBX8,CBX2	984,19973,984
chr21:39575542-39576891	chr21	+	39575980	39576906	True	NM_005867,NR_027695	chr21,chr21	-,+	DSCR4,DSCR10	-82526,1343
chr14:76452648-76454109	chr14	+	76452700	76453887	True	NM_001102564,NM_052873,NM_003239	chr14,chr14,chr14	+,+,-	C14orf179,C14orf179,TGFB3	-655,-655,-4608
chr4:36201004-36202170	chr4	+	36201200	36202223	True	NM_015230,NM_001136536	chr4,chr4	-,+	ARAP2,DTHD1	43810,81020
chr19:33361358-33361899	chr19	+	33361406	33361806	True	NM_014270,NM_001126335,NM_152266	chr19,chr19,chr19	-,-,+	SLC7A9,SLC7A9,C19orf40	-723,-723,101341
chr8:70746363-70746652	chr8	+	70746375	70746593	True	NM_001128206,NM_030958,NM_001146008,NM_001146009	chr8,chr8,chr8,chr8	+,-,-,-	SULF1,SLCO5A1,SLCO5A1,SLCO5A1	-341398,756,-750,-971
chr16:33141037-33142161	chr16	+	33141503	33142159	True	NR_033866,NM_016212	chr16,chr16	-,+	LOC390705,TP53TG3	156593,62820
chr16:33141037-33142161	chr16	+	32200520	32201175	False	NR_002827,NM_003414	chr16,chr16	-,+	HERC2P4,ZNF267	-36646,-315492
chr16:33141037-33142161	chr16	-	32750893	32751549	False	NM_016212	chr16	-	TP53TG3	-62840
chr8:22550038-22550344	chr8	+	22550045	22550361	True	NM_021174,NM_004430,NM_001199880,NM_001199881	chr8,chr8,chr8,chr8	+,-,-,-	KIAA1967,EGR3,EGR3,EGR3	-87557,504,-143,48
chrX:135291771-135292403	chrX	+	135292098	135292319	True	NM_001173517,NM_001159699	chrX,chrX	-,+	MAP7D3,FHL1	41469,-13094
chr5:141062944-141063726	chr5	+	141062999	141063681	True	NM_022481,NM_173828	chr5,chr5	-,+	ARAP3,RELL2	-1199,-46533
chr17:3494235-3495366	chr17	+	3494253	3495149	True	NM_080705,NM_080706,NM_018727,NM_001031681	chr17,chr17,chr17,chr17	-,-,-,+	TRPV1,TRPV1,TRPV1,CTNS	4026,1072,5237,44612
chr12:5476193-5476993	chr12	+	5476264	5477009	True	NM_020373,NM_001102654	chr12,chr12	-,+	ANO2,NTF3	578439,64270
chr15:101814775-101816612	chr15	+	101815020	101815944	True	NM_024652,NM_018445,NM_203472	chr15,chr15,chr15	+,-,-	LRRK1,SELS,SELS	-355622,1806,1806
chr11:133773284-133774018	chr11	+	133773287	133774025	True	NR_024344,NR_027276	chr11,chr11	-,+	LOC283174,LOC100128239	-1652,128141
chr4:39182454-39183213	chr4	+	39182491	39183093	True	NM_025132,NM_024943	chr4,chr4	+,-	WDR19,TMEM156	930,-148450
chr11:924688-924903	chr11	+	924747	924877	True	NM_001142675,NM_012305	chr11,chr11	-,+	CHID1,AP2A2	-9689,963
chr10:123355757-123356039	chr10	+	123355900	123356076	True	NM_000141,NM_022970,NM_001144916,NM_001144917,NM_001144914,NM_001144915,NM_206861,NM_001144913,NM_001144918,NM_001144919	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,-,-,+,-,-,-	FGFR2,FGFR2,FGFR2,FGFR2,FGFR2,FGFR2,TACC2,FGFR2,FGFR2,FGFR2	1946,1946,-2128,1946,-2419,133,392612,-2419,1946,1946
chr1:120906352-120907497	chr1	+	120906403	120907356	True	NR_027337,NM_001004340	chr1,chr1	+,-	HIST2H2BA,FCGR1B	-420,28638
chr1:120906352-120907497	chr1	-	149782559	149783517	False	NM_001024599,NM_001161334,NM_001123375,NM_001034077	chr1,chr1,chr1,chr1	-,-,-,+	HIST2H2BF,HIST2H2BF,HIST2H3D,HIST2H4B	461,461,1769,20703
chr1:120906352-120907497	chr1	-	149397865	149398818	False	NR_027484,NM_001024599	chr1,chr1	+,-	FCGR1C,HIST2H2BF	-28622,461
chr2:39665279-39666272	chr2	+	39665349	39666127	True	NR_037875,NM_003618	chr2,chr2	+,-	LOC728730,MAP4K3	-843,-1130
chr11:89486185-89487163	chr11	+	89486256	89487196	True	NM_001146162,NM_020358	chr11,chr11	+,-	TRIM77,TRIM49	-42840,54597
chr11:89486185-89487163	chr11	-	89819055	89819995	False	NM_001143975,NR_028346	chr11,chr11	+,-	UBTFL1,TRIM53	12,-83379
chr11:89486185-89487163	chr11	-	49103405	49104345	False	NM_001014986,NR_027044	chr11,chr11	-,+	FOLH1,LOC440040	125927,475734
chr1:171749834-171750457	chr1	+	171750028	171750474	True	NM_001007239,NM_014955,NM_015935,NR_033704	chr1,chr1,chr1,chr1	+,+,+,-	METTL13,METTL13,METTL13,VAMP4	286,286,286,-38649
chr3:80857087-80857812	chr3	+	80857090	80857685	True	NM_001128929,NM_000158	chr3,chr3	+,-	ROBO2,GBE1	-3709978,953322
chr17:2302489-2302692	chr17	+	2302582	2302670	True	NM_020310,NM_001098509	chr17,chr17	-,+	MNT,SGSM2	1638,-61825
chr14:69264331-69266221	chr14	+	69264338	69265873	True	NM_207442,NM_004926,NM_001193360	chr14,chr14,chr14	-,-,+	C14orf181,ZFP36L1,EXD2	-1148,-4553,392320
chr12:3968451-3969530	chr12	+	3969106	3969562	True	NM_019854,NM_020367	chr12,chr12	+,-	PRMT8,PARP11	-368732,13096
chr17:16257705-16258136	chr17	+	16257837	16258156	True	NM_181716,NM_018955	chr17,chr17	-,+	CENPV,UBB	-1025,26210
chr8:143278293-143278616	chr8	+	143278581	143278646	True	NM_145003,NR_024378	chr8,chr8	-,+	TSNARE1,NCRNA00051	205948,1070
chr22:19140384-19141076	chr22	+	19140705	19140945	True	NM_005315,NM_053006,NM_022719	chr22,chr22,chr22	-,+,-	GSC2,TSSK2,DGCR14	-2909,-22435,-8515
chr20:62285205-62285933	chr20	+	62285437	62285835	True	NM_015894,NM_016434,NR_037882,NM_032957	chr20,chr20,chr20,chr20	-,+,+,+	STMN3,RTEL1,RTEL1-TNFRSF6B,RTEL1	-657,3327,3327,3327
chr14:59663383-59663761	chr14	+	59663526	59663640	True	NM_014992,NM_022571	chr14,chr14	+,-	DAAM1,GPR135	-8188,268479
chr8:6797710-6798124	chr8	+	6797717	6798076	True	NM_018361,NM_001925	chr8,chr8	+,-	AGPAT5,DEFA4	-231890,-1931
chr1:110090753-110090978	chr1	+	110090843	110091027	True	NM_006496,NM_031936,NM_020703	chr1,chr1,chr1	+,+,-	GNAI3,GPR61,AMIGO1	158,-8400,-38507
chr20:61732465-61733207	chr20	+	61732555	61733222	True	NR_003245,NR_003244	chr20,chr20	-,+	HAR1B,HAR1A	499,22
chr15:74218882-74219144	chr15	+	74218942	74219070	True	NM_004809,NM_005576	chr15,chr15	-,+	STOML1,LOXL1	65615,-204
chr14:74109550-74109923	chr14	+	74109650	74109890	True	NM_031427,NM_001201366,NM_006029	chr14,chr14,chr14	+,+,-	DNAL1,DNAL1,PNMA1	1687,1687,71296
chr20:35088169-35089167	chr20	+	35088337	35089215	True	NM_183006,NM_032214,NM_001042486	chr20,chr20,chr20	+,-,+	DLGAP4,SLA2,DLGAP4	926,185393,626
chr16:74643313-74643772	chr16	+	74643525	74643616	True	NM_002811,NM_001145667,NR_027265,NM_001145666,NR_027264,NM_012201	chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,-,-,-	PSMD7,GLG1,GLG1,GLG1,GLG1,GLG1	-312905,-2483,-2483,-2483,-2483,-2483
chr7:102989139-102990084	chr7	+	102989146	102989901	True	NM_001204453,NM_001129887,NM_002803,NM_014377	chr7,chr7,chr7,chr7	+,-,+,-	PSMC2,DNAJC2,PSMC2,DNAJC2	-1227,-3826,-1227,-3826
chr22:45562290-45563310	chr22	+	45562476	45563308	True	NM_007172,NR_031651,NM_153645	chr22,chr22,chr22	+,-,+	NUP50,MIR1249,NUP50	-2802,33643,-1976
chr17:72246605-72247761	chr17	+	72246868	72247586	True	NR_026914,NM_052869	chr17,chr17	-,+	MGC16275,TTYH2	-37408,-2414
chr22:24371700-24372481	chr22	+	24371699	24372437	True	NM_001144931,NM_000853	chr22,chr22	+,-	LOC391322,GSTT1	679,11904
chrX:142794775-142796041	chrX	+	142794929	142796003	True	NM_001012989,NM_001009615	chrX,chrX	+,-	UBE2NL,SPANXN2	171169,8563
chr3:62809399-62811123	chr3	+	62809399	62811126	True	NR_027104,NM_003716	chr3,chr3	+,-	LOC285401,CADPS	277237,49988
chr8:28347850-28348113	chr8	+	28347971	28348087	True	NM_017412,NM_172366,NM_145866	chr8,chr8,chr8	+,-,+	FZD3,FBXO16,FZD3	3634,-187,3634
chr10:28287602-28287813	chr10	+	28287641	28287831	True	NM_021252,NM_018076	chr10,chr10	+,-	RAB18,ARMC4	-494443,196
chr8:70983351-70983565	chr8	+	70983357	70983583	True	NM_024504,NM_001128206	chr8,chr8	-,+	PRDM14,SULF1	29,-578380
chrX:153599216-153599525	chrX	+	153599252	153599490	True	NM_001110556,NM_000117,NM_001456	chrX,chrX,chrX	-,+,-	FLNA,EMD,FLNA	3566,8106,3566
chr6:44096083-44096421	chr6	+	44096174	44096238	True	NM_018426,NM_032111	chr6,chr6	+,-	TMEM63B,MRPL14	-849,-983
chrX:114524884-114525658	chrX	+	114524903	114525310	True	NM_016383,NM_020871	chrX,chrX	+,-	LUZP4,LRCH2	-662,-56268
chr4:49326063-49327274	chr4	+	49326064	49327006	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-337850,-417249
chr4:49326063-49327274	chr4	-	49287290	49288232	False	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-299076,-378475
chr2:96811417-96811839	chr2	+	96811439	96811824	True	NM_004418,NM_001037228,NM_001002036	chr2,chr2,chr2	-,+,-	DUSP2,LOC285033,ASTL	-260,94152,-7264
chr5:1224101-1224924	chr5	+	1224151	1224955	True	NM_182632,NM_001193376	chr5,chr5	+,-	SLC6A18,TERT	514,70257
chr7:150885082-150885600	chr7	+	150885083	150885597	True	NM_001142460,NM_080871,NM_001142459,NM_019015	chr7,chr7,chr7,chr7	-,-,-,+	ASB10,ASB10,ASB10,CHPF2	-605,-164,-605,43987
chr6:132021939-132022304	chr7	+	143956124	143956406	False	NR_002158,NM_001005328,NR_002157	chr7,chr7,chr7	-,-,-	OR2A20P,OR2A7,OR2A9P	-7428,365,-7576
chr6:132021939-132022304	chr6	+	132021944	132022226	True	NM_030908,NM_005021,NM_001145659	chr6,chr6,chr6	-,+,-	OR2A4,ENPP3,CTAGE9	365,-63553,9981
chr14:65452036-65452535	chr14	+	65452123	65452270	True	NM_002028,NM_198686	chr14,chr14	+,-	FNTB,RAB15	1236,-13248
chr7:87100517-87101399	chr7	+	87100849	87101423	True	NM_000443,NM_021151,NM_018850,NM_018849	chr7,chr7,chr7,chr7	-,+,-,-	ABCB4,CROT,ABCB4,ABCB4	3646,-125959,3646,3646
chr17:30455779-30456626	chr17	+	30455945	30456635	True	NM_001033566,NR_002222	chr17,chr17	+,-	RHOT1,ARGFXP2	12837,22005
chr19:36391681-36392632	chr19	+	36392195	36392453	True	NM_001007469,NM_003332,NM_001173514,NM_001173515,NR_033390,NM_198125,NM_139239,NM_014266	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,-,-,-,-,-,+	HCST,TYROBP,TYROBP,TYROBP,TYROBP,TYROBP,NFKBID,HCST	928,6808,6808,6808,6808,6808,-643,928
chr16:1204979-1205229	chr16	+	1205054	1205214	True	NM_021098,NM_207419,NM_001005407	chr16,chr16,chr16	+,-,+	CACNA1H,C1QTNF8,CACNA1H	-1864,-58810,-1864
chr6:15003842-15005419	chr6	+	15003878	15005067	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	241459,658288
chr17:78162350-78162704	chr17	+	78162407	78162580	True	NM_000199,NM_052819	chr17,chr17	-,+	SGSH,CARD14	31670,-863
chr16:67197136-67197834	chr16	+	67197182	67197738	True	NM_001040667,NM_001538,NM_003789,NM_018378,NM_001185058	chr16,chr16,chr16,chr16,chr16	+,+,-,+,+	HSF4,HSF4,TRADD,FBXL8,NOL3	17,17,-3370,-3342,6666
chr2:3521391-3522277	chr2	+	3521607	3522224	True	NM_001011,NM_018269	chr2,chr2	+,-	RPS7,ADI1	100628,1177
chr7:5568736-5569079	chr7	+	5568753	5569073	True	NM_001101,NM_003088	chr7,chr7	-,+	ACTB,FSCN1	1209,63380
chr12:54892528-54892800	chr12	+	54892579	54892662	True	NM_005337,NM_144594,NM_001184976	chr12,chr12,chr12	+,-,+	NCKAP1L,GTSF1,NCKAP1L	-1143,-25193,-70
chr14:24523338-24523928	chr14	+	24523466	24523948	True	NM_138360,NM_006177	chr14,chr14	+,-	LRRC16B,NRL	-2311,29934
chr18:46991759-46992704	chr18	+	46991793	46992121	True	NM_017653,NR_031720	chr18,chr18	-,+	DYM,MIR1539	-4714,21621
chr1:156738912-156739482	chr1	+	156738953	156739351	True	NM_001126050,NM_005973	chr1,chr1	-,+	HDGF,PRCC	-16713,-1732
chr8:65667954-65668194	chr8	+	65668177	65668241	True	NM_152414,NM_004820	chr8,chr8	+,-	BHLHE22,CYP7B1	-175439,43159
chr10:14879901-14880148	chr10	+	14879991	14880109	True	NM_016299,NM_001029954	chr10,chr10	+,-	HSPA14,CDNF	151,-8
chr7:75130631-75131061	chr7	+	75130930	75131082	True	NM_001099415,NM_001099435	chr7,chr7	-,+	POM121C,SPDYE5	-15362,-6682
chr11:117857871-117859388	chr11	+	117857949	117859385	True	NR_026691,NM_001077263,NM_001558	chr11,chr11,chr11	+,-,+	IL10RA,TMPRSS13,IL10RA	-894,-57834,-894
chr9:140486486-140486760	chr9	+	140486574	140486772	True	NM_152285,NM_138462	chr9,chr9	+,-	ARRDC1,ZMYND19	13323,-1637
chr11:107462719-107463174	chr11	+	107462835	107463207	True	NM_138775,NR_028328,NM_018712,NM_001130037	chr11,chr11,chr11,chr11	-,+,+,+	ALKBH8,LOC643923,ELMOD1,ELMOD1	-26374,-415,-1069,-1069
chr18:56941601-56942908	chr18	+	56941694	56942874	True	NM_013435,NM_002091	chr18,chr18	-,+	RAX,GRP	-1069,-54345
chr19:56447720-56448993	chr19	+	56448075	56449006	True	NM_176810,NM_176811	chr19,chr19	-,+	NLRP13,NLRP8	-4373,10191
chr6:46138659-46138884	chr6	+	46138660	46138834	True	NM_014936,NM_021572	chr6,chr6	+,-	ENPP4,ENPP5	-41010,-15
chr19:46232611-46233195	chr19	+	46232728	46233174	True	NM_001080469,NM_017659	chr19,chr19	-,+	FBXO46,QPCTL	1027,-37052
chr4:166248061-166248397	chr4	+	166248086	166248442	True	NM_001017369,NR_026575,NM_006745	chr4,chr4,chr4	+,-,+	SC4MOL,GK3P,SC4MOL	375,-46911,375
chr1:33165626-33166703	chr1	+	33165661	33166493	True	NM_030786,NM_001161708,NM_020888	chr1,chr1,chr1	-,-,+	SYNC,SYNC,KIAA1522	1920,1920,41018
chr12:49414459-49414912	chr12	+	49414465	49414735	True	NM_002733,NM_212461,NM_005430	chr12,chr12,chr12	-,-,+	PRKAG1,PRKAG1,WNT1	-1873,-1873,-42280
chr2:128173950-128175159	chr2	+	128173956	128175192	True	NM_000312,NM_006609	chr2,chr2	+,-	PROC,MAP3K2	803,-73186
chr1:178307557-178307796	chr1	+	178307558	178307815	True	NM_004841,NR_027982	chr1,chr1	+,-	RASAL2,LOC100302401	2790,-244430
chr4:159941701-159942004	chr4	+	159941723	159941903	True	NM_152543,NM_014247	chr4,chr4	-,+	C4orf45,RAPGEF2	14484,247094
chr14:103993316-103993870	chr14	+	103993437	103993887	True	NM_152307,NM_001823	chr14,chr14	+,-	TRMT61A,CKB	1621,-4267
chrX:148717073-148717448	chrX	+	148717083	148717451	True	NM_001011544,NM_001174092,NM_032508	chrX,chrX,chrX	+,-,-	MAGEA11,TMEM185A,TMEM185A	52451,-3596,-3596
chr1:246563812-246565183	chr1	+	246563932	246565033	True	NM_001139459,NM_022743	chr1,chr1	+,-	CNST,SMYD3	164605,15736
chr3:31588992-31589848	chr3	+	31589134	31589805	True	NM_178862,NM_001174060	chr3,chr3	+,-	STT3B,OSBPL10	-14694,433594
chr2:175628737-175629128	chr2	+	175628745	175629015	True	NM_024583,NM_000079,NM_001039523	chr2,chr2,chr2	+,-,-	SCRN3,CHRNA1,CHRNA1	-368339,235,235
chr7:6892775-6893964	chr7	+	6892925	6893893	True	NM_198097,NM_173565	chr7,chr7	-,+	C7orf28B,RSPH10B	-26999,-99236
chr12:45614785-45615197	chr12	+	45614884	45615228	True	NM_001142679,NR_037144,NM_001025356,NM_001142680,NM_001204803	chr12,chr12,chr12,chr12,chr12	+,-,+,+,+	ANO6,PLEKHA8P1,ANO6,ANO6,ANO6	-5165,-5095,-5165,-5059,-5165
chr19:55721452-55721845	chr19	+	55721520	55721834	True	NM_032430,NM_001161440,NM_002842	chr19,chr19,chr19	+,-,-	BRSK1,PTPRH,PTPRH	73699,-646,-646
chr1:24439135-24440293	chr1	+	24439261	24440287	True	NM_152372,NR_027087	chr1,chr1	-,+	MYOM3,LOC284632	-596,86442
chr16:68270509-68271040	chr16	+	68270616	68271068	True	NM_024939,NM_012320	chr16,chr16	-,+	ESRP2,PLA2G15	-480,8178
chrX:104464697-104465042	chrX	+	104464739	104465057	True	NM_031274,NM_198465	chrX,chrX	-,+	TEX13A,NRK	351,601478
chr16:8619948-8620424	chr16	+	8619952	8620320	True	NM_001146336,NM_024109	chr16,chr16	-,+	TMEM114,METTL22	1956,95206
chr8:23538843-23539312	chr8	+	23538885	23539359	True	NM_006167,NM_016612	chr8,chr8	-,+	NKX3-1,SLC25A37	1153,-152574
chr11:102600501-102601769	chr11	+	102600690	102601764	True	NM_001080463,NM_002424	chr11,chr11	+,-	DYNC2H1,MMP8	378395,-5005
chr17:25450111-25451896	chr17	+	25450443	25451540	True	NM_015626,NM_000625	chr17,chr17	+,-	WSB1,NOS2	169565,676074
chr11:56057389-56059312	chr11	+	56057441	56059353	True	NM_001004745,NM_001005199	chr11,chr11	+,-	OR5T1,OR8H1	-14387,91
chr14:23904946-23905694	chr14	+	23905029	23905630	True	NM_000257,NM_001042635	chr14,chr14	-,+	MYH7,NGDN	-159,33267
chr15:36870281-36871115	chr15	+	36870569	36870964	True	NM_001130010,NR_027320	chr15,chr15	+,-	C15orf41,CSNK1A1P1	847,239802
chr19:19919091-19919506	chr19	+	19919236	19919318	True	NM_001099269,NM_021047	chr19,chr19	-,+	ZNF506,ZNF253	13306,57395
chr4:4142399-4143185	chr4	+	4142769	4143153	True	NM_145291,NM_177998	chr4,chr4	+,-	ZBTB49,OTOP1	148770,85518
chr4:4142399-4143185	chr4	-	8967849	8967899	False	NM_018942,NM_001040071	chr4,chr4	-,+	HMX1,LOC650293	-94306,-16423
chr11:56185648-56186822	chr11	+	56185763	56186863	True	NM_001004744,NM_001013356	chr11,chr11	-,+	OR5R1,OR8U8	-55,-42714
chr11:6230934-6231216	chr11	+	6230948	6231154	True	NM_173525,NM_001098794	chr11,chr11	+,-	C11orf42,FAM160A2	-4210,24837
chr12:48114611-48116570	chr12	+	48114651	48116599	True	NM_001172439,NM_006025,NM_001172440,NM_017842	chr12,chr12,chr12,chr12	-,-,-,+	ENDOU,ENDOU,ENDOU,SLC48A1	2806,2806,2806,50367
chr1:36787376-36787726	chr1	+	36787378	36787682	True	NM_024676,NM_018166	chr1,chr1	+,-	SH3D21,FAM176B	-14721,2123
chr16:85211364-85211608	chr16	+	85211396	85211592	True	NR_033984,NM_198491	chr16,chr16	+,-	LOC400548,FAM92B	-40692,-65282
chr17:56296774-56297358	chr17	+	56296778	56297338	True	NM_001165927,NM_017777,NM_001160102	chr17,chr17,chr17	-,-,+	MKS1,MKS1,LPO	-10,-112,18448
chr12:121647853-121648194	chr12	+	121647990	121648226	True	NM_002560,NM_172226	chr12,chr12	+,-	P2RX4,CAMKK2	-377,86380
chr11:64936355-64937384	chr11	+	64936516	64937431	True	NM_001008778,NM_172230	chr11,chr11	+,-	SPDYC,SYVN1	275,-34513
chr1:161015051-161015292	chr1	+	161015051	161015241	True	NM_001113206,NM_001113207,NM_001113205,NR_033385,NM_207005,NM_007122	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,-	TSTD1,TSTD1,TSTD1,KLHDC9,USF1,USF1	-6277,-6277,-6277,52909,566,566
chr19:1905756-1906147	chr19	+	1905794	1906088	True	NM_079834,NM_031213,NM_138422	chr19,chr19,chr19	+,-,+	SCAMP4,FAM108A1,ADAT3	-472,-20276,-428
chr2:25895716-25895924	chr2	+	25895734	25895940	True	NM_183360,NM_183361,NM_033147,NM_016131,NM_021907,NM_033148	chr2,chr2,chr2,chr2,chr2,chr2	-,-,-,+,-,-	DTNB,DTNB,DTNB,RAB10,DTNB,DTNB	613,613,613,360788,613,613
chr11:46868060-46869462	chr11	+	46868198	46869131	True	NM_014756,NM_001003676,NM_001008938	chr11,chr11,chr11	-,+,-	CKAP5,C11orf49,CKAP5	-355,89119,-355
chr1:19940660-19942314	chr1	+	19941167	19942314	True	NM_004930,NM_001204089	chr1,chr1	-,+	CAPZB,C1orf15-NBL1	-129101,-17747
chr11:108368272-108368621	chr11	+	108368287	108368614	True	NM_153705,NM_004398	chr11,chr11	-,+	KDELC2,DDX10	595,167201
chr1:111888875-111889467	chr1	+	111888898	111889442	True	NR_029429,NM_181643	chr1,chr1	-,+	PGCP1,C1orf88	43081,-60
chr5:86563863-86564203	chr5	+	86563875	86564053	True	NM_001199189,NM_022650,NM_002890	chr5,chr5,chr5	-,+,+	CCNH,RASA1,RASA1	144718,712,97
chr15:51977898-51979267	chr15	+	51977931	51979283	True	NM_013243,NM_153374,NM_001165257	chr15,chr15,chr15	+,-,+	SCG3,LYSMD2,SCG3	-4433,51087,-4433
chr4:57327059-57329020	chr4	+	57327176	57328544	True	NM_002703,NM_006947	chr4,chr4	-,+	PPAT,SRP72	-25374,5217
chr18:2571048-2571540	chr18	+	2571055	2571571	True	NM_006101,NM_022840	chr18,chr18	+,-	NDC80,METTL4	-48,-18
chr10:38645535-38647416	chr10	+	38645717	38647423	True	NR_027269,NR_003086	chr10,chr10	-,+	SEPT7L,HSD17B7P2	44407,-460
chr10:38645535-38647416	chr1	+	162761170	162761482	False	NM_178550,NM_016371	chr1,chr1	-,+	C1orf110,HSD17B7	77179,-726
chr16:69369641-69370491	chr16	+	69369774	69370526	True	NM_022341,NM_001199434,NM_016101,NM_032382	chr16,chr16,chr16,chr16	-,+,+,-	PDF,NIP7,NIP7,COG8	-5276,2888,2888,3050
chr22:29946647-29947277	chr22	+	29946672	29947115	True	NM_181825,NM_001002877,NM_001002878,NM_001002879,NM_003678	chr22,chr22,chr22,chr22,chr22	+,-,-,-,-	NF2,THOC5,THOC5,THOC5,THOC5	52429,2678,2586,2586,2678
chr7:66386682-66386913	chr7	+	66386725	66386921	True	NM_017994,NM_016038	chr7,chr7	+,-	C7orf42,SBDS	-573,73717
chr12:53207891-53208323	chr12	+	53207894	53208370	True	NM_199187,NM_002272	chr12,chr12	+,-	KRT18,KRT4	134284,15
chr17:35953845-35954667	chr17	+	35953999	35954151	True	NM_007026,NM_001163544	chr17,chr17	+,-	DUSP14,SYNRG	-104108,15393
chr2:102922896-102924011	chr2	+	102922896	102923612	True	NM_016232,NM_032718	chr2,chr2	+,-	IL1RL1,MFSD9	4349,429777
chr19:36340542-36340976	chr19	+	36340550	36340806	True	NM_199180,NM_004646,NM_032123,NM_199179	chr19,chr19,chr19,chr19	+,-,+,+	KIRREL2,NPHS1,KIRREL2,KIRREL2	7003,2141,7003,7003
chr20:36320566-36321021	chr20	+	36320602	36321066	True	NM_006698,NM_030877	chr20,chr20	-,+	BLCAP,CTNNBL1	-164269,1367
chr5:145216181-145217046	chr5	+	145216273	145216769	True	NM_205846,NM_182960,NM_138492,NM_152550	chr5,chr5,chr5,chr5	-,-,-,+	PRELID2,PRELID2,PRELID2,SH3RF2	-1406,-1406,-1374,99356
chr13:33083405-33084884	chr13	+	33083404	33084338	True	NR_026928,NM_015032	chr13,chr13	-,+	CG030,PDS5B	-16,76225
chr4:75475679-75477125	chr4	+	75475916	75476807	True	NM_001657,NM_001729	chr4,chr4	+,-	AREG,BTC	3821,243126
chr4:75475679-75477125	chr4	+	75306118	75307009	False	NM_001657,NM_002089	chr4,chr4	+,-	AREG,CXCL2	3843,-341121
chr14:20802575-20803678	chr14	+	20802755	20803502	True	NM_182851,NM_182852,NM_001042618,NR_002312,NM_182849,NR_003693,NM_005484,NM_021178	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	-,-,+,-,-,-,+,-	CCNB1IP1,CCNB1IP1,PARP2,RPPH1,CCNB1IP1,SNORD126,PARP2,CCNB1IP1	-5219,-5222,8270,8118,-1298,-8057,8270,-1298
chr12:76673792-76674562	chr12	+	76673837	76674581	True	NM_015336,NM_024685	chr12,chr12	+,-	ZDHHC17,BBS10	483272,67691
chr7:39768167-39768367	chr7	+	39768186	39768266	True	NM_138701,NR_026999	chr7,chr7	-,+	C7orf11,NCRNA00265	406039,4900
chr1:2484496-2484776	chr1	+	2484703	2484781	True	NR_037844,NR_026927,NM_003820	chr1,chr1,chr1	-,-,+	LOC100133445,LOC115110,TNFRSF14	3719,-419,3023
chr1:2484496-2484776	chr1	-	2499792	2499854	False	NR_037844,NM_003820	chr1,chr1	-,+	LOC100133445,TNFRSF14	-11342,-12038
chr8:57303559-57305534	chr8	+	57303581	57305555	True	NM_006211,NM_024300	chr8,chr8	-,+	PENK,CHCHD7	53088,-179317
chr14:74183093-74183699	chr14	+	74183448	74183676	True	NM_031427,NM_006029	chr14,chr14	+,-	DNAL1,PNMA1	-71921,-2320
chr11:123397703-123398197	chr11	+	123397914	123398246	True	NM_020716,NM_001040151	chr11,chr11	+,-	GRAMD1B,SCN3B	-1437,127119
chr7:64020789-64022032	chr7	+	64020864	64021753	True	NM_178558,NM_001130022,NR_033245	chr7,chr7,chr7	-,-,+	ZNF680,ZNF680,LOC641746	1802,1802,21234
chr4:168075762-168076357	chr4	+	168075889	168076062	True	NM_001204353,NM_007193	chr4,chr4	-,+	SPOCK3,ANXA10	79578,937625
chr1:156675026-156675323	chr1	+	156675056	156675344	True	NM_001199723,NM_001878,NM_001142560	chr1,chr1,chr1	-,-,+	CRABP2,CRABP2,RRNAD1	314,165,22918
chrX:34961908-34962220	chrX	+	34961955	34962183	True	NM_152631,NM_031442	chrX,chrX	+,-	FAM47B,TMEM47	-1093,-286550
chr12:2027376-2028154	chr12	+	2027823	2028113	True	NM_001163926,NM_172364	chr12,chr12	+,-	LRTM2,CACNA2D4	-98441,35
chr19:10448015-10448529	chr19	+	10448237	10448545	True	NM_002162,NM_133452,NM_003259	chr19,chr19,chr19	-,-,+	ICAM3,RAVER1,ICAM5	1850,-3923,-47638
chr6:11093658-11094088	chr6	+	11093712	11093802	True	NM_001135575,NM_207582	chr6,chr6	+,-	LOC221710,ERVFRDE1	463,18319
chr4:113709991-113711556	chr4	+	113710155	113711582	True	NR_029857,NM_001127493	chr4,chr4	-,+	MIR302B,ANK2	-140442,27656
chr1:110163425-110163751	chr1	+	110163532	110163706	True	NM_139156,NM_005272,NM_203404,NM_004037	chr1,chr1,chr1,chr1	+,-,+,+	AMPD2,GNAT2,AMPD2,AMPD2	-1124,-7827,4342,-307
chr4:158144005-158144375	chr4	+	158144108	158144394	True	NM_001083619,NM_000826,NR_036641,NM_001083620	chr4,chr4,chr4,chr4	+,+,-,+	GRIA2,GRIA2,PDGFC,GRIA2	-2423,-2423,-251562,-2339
chr15:34729934-34731144	chr15	+	34729957	34731155	True	NM_175741,NR_027409	chr15,chr15	+,-	C15orf55,GOLGA8A	-91942,-290
chr2:95965206-95965906	chr2	+	95965308	95965824	True	NM_013434,NM_032788	chr2,chr2	+,-	KCNIP3,ZNF514	-2287,-140045
chr15:42640392-42641819	chr15	+	42640456	42641624	True	NM_000070,NM_001110503	chr15,chr15	+,-	CAPN3,TMEM87A	10073,-74701
chr1:38480986-38481514	chr1	+	38481039	38481532	True	NM_004468,NM_016037	chr1,chr1	-,+	FHL3,UTP11L	-9805,-2706
chr1:2520326-2520949	chr1	+	2520336	2520988	True	NR_036637,NM_001195741,NM_001195740,NR_037844,NR_036638,NM_001195738,NM_152371,NM_001195736,NM_001195737	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,-,+,+,+,+,+	C1orf93,C1orf93,C1orf93,LOC100133445,C1orf93,C1orf93,C1orf93,C1orf93,C1orf93	-2488,-2198,-2198,-31886,-2488,-2198,-2198,-2198,-2198
chr10:49459843-49460451	chr10	+	49459914	49460492	True	NM_001018071,NM_002750	chr10,chr10	-,+	FRMPD2,MAPK8	22499,149194
chr9:124129342-124130181	chr9	+	124129424	124130161	True	NM_004099,NM_000177,NM_198194	chr9,chr9,chr9	-,+,-	STOM,GSN,STOM	2440,-67396,2440
chr12:115123478-115124294	chr12	+	115123527	115124202	True	NM_138432,NM_016569,NM_005996	chr12,chr12,chr12	+,-,-	SDSL,TBX3,TBX3	-1263362,-1558,-1558
chr11:118044444-118045938	chr11	+	118044574	118045907	True	NM_004588,NM_019894	chr11,chr11	-,+	SCN2B,TMPRSS4	1481,-96898
chr16:67841676-67842303	chr16	+	67841783	67842188	True	NM_018430,NM_020850	chr16,chr16	+,-	TSNAXIP1,RANBP10	-824,-1228
chr10:75928704-75930276	chr10	+	75929160	75930009	True	NM_001123,NM_001202449,NM_207012	chr10,chr10,chr10	+,+,-	ADK,ADK,AP3M1	6237,6237,-18334
chr7:23750159-23750805	chr7	+	23750265	23750763	True	NM_031414,NM_032944,NR_002711,NM_001122833	chr7,chr7,chr7,chr7	+,+,-,+	STK31,STK31,CLK2P,STK31	-478,-319,-124119,-478
chr5:149535308-149536012	chr5	+	149535348	149536010	True	NM_001804,NM_002609	chr5,chr5	+,-	CDX1,PDGFRB	10333,74
chr12:53241716-53242473	chr12	+	53241842	53242360	True	NM_173352,NM_199187	chr12,chr12	-,+	KRT78,KRT18	468,100294
chr19:52642832-52643183	chr19	+	52642933	52643217	True	NM_014225,NM_178523	chr19,chr19	+,-	PPP2R1A,ZNF616	49837,24
chr1:176440367-176440974	chr1	+	176440455	176441012	True	NM_021936,NM_020318,NM_022457	chr1,chr1,chr1	+,+,-	PAPPA2,PAPPA2,RFWD2	-8206,-8206,-264085
chr22:18561403-18561820	chr22	+	18561448	18561811	True	NM_001127649,NM_017929,NM_001199319,NM_001136004	chr22,chr22,chr22,chr22	+,+,+,-	PEX26,PEX26,PEX26,MICAL3	-739,-813,-813,-54123
chr17:17287311-17287632	chr17	+	17287349	17287549	True	NM_003653,NM_020201	chr17,chr17	-,+	COPS3,NT5M	-102732,-80720
chr8:37704208-37704685	chr8	+	37704290	37704702	True	NM_018310,NM_032777	chr8,chr8	-,+	BRF2,GPR124	2779,-49940
chr7:103617477-103617825	chr7	+	103617784	103617872	True	NM_005045,NM_199000	chr7,chr7	-,+	RELN,LHFPL3	12141,351231
chr12:58124672-58125621	chr12	+	58124680	58125624	True	NM_001122772,NR_027032	chr12,chr12	-,+	AGAP2,LOC100130776	6455,-4708
chr18:29673280-29673816	chr18	+	29673405	29673813	True	NM_014939,NM_001191324,NM_016271,NM_198128	chr18,chr18,chr18,chr18	-,+,+,+	TRAPPC8,RNF138,RNF138,RNF138	-150314,-887,-1638,-887
chr9:123605844-123606244	chr9	+	123606106	123606292	True	NM_005047,NR_024408	chr9,chr9	-,+	PSMD5,LOC253039	-900,-837
chr1:38470096-38470499	chr1	+	38470153	38470489	True	NM_004468,NM_016037	chr1,chr1	-,+	FHL3,UTP11L	795,7894
chr3:129411776-129412163	chr3	+	129411921	129412204	True	NM_153833,NR_033361	chr3,chr3	+,-	H1FOO,TMCC1	-149925,-4346
chr15:85426085-85426327	chr15	+	85426188	85426354	True	NM_201651,NM_004213,NM_014300	chr15,chr15,chr15	+,+,-	SLC28A1,SLC28A1,SEC11A	1558,1558,-166514
chr15:25458396-25459156	chr15	+	25458395	25459165	True	NR_003315,NR_003314,NR_003313,NR_003495,NR_003496,NR_003310,NR_003497,NR_003311,NR_022010,NR_003358,NR_003344,NR_003309,NR_003351,NM_130838,NR_003342,NR_003343,NR_003303,NR_003307,NR_003312	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,+,+,+,+,-,+,+,+,+,+	SNORD115-23,SNORD115-22,SNORD115-21,SNORD115-24,HBII-52-27,SNORD115-18,HBII-52-28,SNORD115-19,PAR4,SNORD115-43,SNORD115-29,SNORD115-17,SNORD115-36,UBE3A,SNORD115-25,SNORD115-26,SNORD115-11,SNORD115-15,SNORD115-20	-1503,-3381,-7037,-24,6484,-8942,8335,-8942,-1607,9227,9227,-8942,9227,191538,1522,4598,9227,-7037,-7037
chr19:18719780-18720579	chr19	+	18719965	18720473	True	NM_012109,NM_004750	chr19,chr19	+,-	TMEM59L,CRLF1	3208,-2305
chr17:15242856-15243586	chr17	+	15242856	15243572	True	NM_031898,NR_033371	chr17,chr17	-,+	TEKT3,CDRT7	1448,-308620
chr2:29093714-29094062	chr2	+	29093714	29093894	True	NM_017910,NM_015131	chr2,chr2	-,+	TRMT61B,WDR43	-539,23638
chr22:42018803-42019175	chr22	+	42018990	42019102	True	NM_015704,NM_001469	chr22,chr22	-,+	PPPDE2,XRCC6	-1929,-1752
chr8:125545415-125546241	chr8	+	125545512	125546094	True	NM_001146160,NR_027427,NM_005005,NM_032026	chr8,chr8,chr8,chr8	-,-,+,-	TATDN1,TATDN1,NDUFB9,TATDN1	5295,5295,5248,5295
chr10:75490609-75491441	chr10	+	75490925	75491047	True	NR_026592,NM_004922	chr10,chr10	-,+	BMS1P4,SEC24C	-653,13083
chr5:137220010-137220996	chr5	+	137220131	137221002	True	NM_014386,NM_006805	chr5,chr5	+,-	PKD2L2,HNRNPA0	4122,-130092
chr12:95942810-95943674	chr12	+	95942919	95943659	True	NM_032147,NM_006838,NM_001042403	chr12,chr12,chr12	-,+,-	USP44,METAP2,USP44	1655,-75148,-299
chr1:173838129-173839284	chr1	+	173838162	173839195	True	NR_002746,NM_032522,NR_003944,NR_037605,NR_003942,NR_003943,NR_003940,NR_003941,NR_002750,NM_001122770,NR_002578,NR_002579,NR_003939,NR_003938	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,+,-,+,-,-,-,-,-,+,-,-,-,-	SNORD47,ZBTB37,SNORD78,LOC100506046,SNORD76,SNORD77,SNORD80,SNORD75,SNORD44,ZBTB37,GAS5,SNORD74,SNORD79,SNORD81	-4579,-733,-3338,-5840,-2309,-2653,-4121,-2086,-2996,-733,-1037,-1279,-3594,-4807
chr1:65730550-65731410	chr1	+	65730627	65731330	True	NR_029516,NM_014787	chr1,chr1	-,+	MIR101-1,DNAJC6	-206436,-248
chr22:36556428-36557190	chr22	+	36556453	36557223	True	NM_145641,NM_145640,NM_145642,NM_001136540,NR_027833,NR_027834,NR_027835	chr22,chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,+,-,-,-	APOL3,APOL3,APOL3,APOL1,APOL3,APOL3,APOL3	5052,-80,5052,91893,-80,-80,-80
chr15:50411533-50411827	chr15	+	50411532	50411874	True	NM_001159629,NM_024837	chr15,chr15	+,-	SLC27A2,ATP8B4	62518,-113
chr17:5974425-5974632	chr17	+	5974500	5974596	True	NM_001033054,NM_015253	chr17,chr17	-,+	AIPL1,WSCD1	363973,-617
chr2:70995042-70995404	chr2	+	70995104	70995338	True	NM_017482,NM_001617,NM_017488,NM_001185054,NM_001185055,NM_012476	chr2,chr2,chr2,chr2,chr2,chr2	-,-,-,-,-,+	ADD2,ADD2,ADD2,ADD2,ADD2,VAX2	87,87,87,-257,87,132381
chr8:22925786-22926095	chr8	+	22925790	22926069	True	NM_003842,NM_147187,NR_027140,NM_003841	chr8,chr8,chr8,chr8	-,-,-,+	TNFRSF10B,TNFRSF10B,TNFRSF10B,TNFRSF10C	681,681,681,34257
chr17:51901957-51902310	chr17	+	51902018	51902351	True	NM_032559,NR_027941	chr17,chr17	+,-	KIF2B,COX11	-1830,1143770
chr17:38172444-38173098	chr17	+	38172578	38173038	True	NM_001079518,NM_000759,NR_033662,NM_172220,NM_172219,NM_001178147	chr17,chr17,chr17,chr17,chr17,chr17	-,+,+,+,+,+	MED24,CSF3,CSF3,CSF3,CSF3,CSF3	37901,-1015,-1015,-1015,-1015,-1015
chr21:40716104-40717650	chr21	+	40716469	40717684	True	NM_004627,NM_004965	chr21,chr21	+,-	WRB,HMGN1	34528,3413
chrX:47440256-47441004	chrX	+	47440488	47441041	True	NM_006950,NM_003254	chrX,chrX	-,+	SYN1,TIMP1	38265,648
chr12:7262144-7263364	chr12	+	7262148	7263216	True	NR_026947,NM_016546	chr12,chr12	+,-	LOC283314,C1RL	-1296,-279
chr7:47695912-47696383	chr7	+	47695948	47696384	True	NM_022748,NM_001123065	chr7,chr7	-,+	TNS3,C7orf65	-74206,-1157
chr22:20461559-20462975	chr22	+	20461741	20462962	True	NM_015672,NR_026919	chr22,chr22	-,+	RIMBP3,LOC150197	45,-267937
chr22:20461559-20462975	chr22	+	21905705	21906923	False	NM_001128635,NM_003347,NM_001128633	chr22,chr22,chr22	-,+,-	RIMBP3B,UBE2L3,RIMBP3C	-332,15033,45
chr22:20461559-20462975	chr22	-	21736499	21737707	False	NM_001128635,NR_003700,NM_001128633	chr22,chr22,chr22	+,-,+	RIMBP3B,PI4KAP2,RIMBP3C	332,134123,-45
chr19:2842760-2843794	chr19	+	2843092	2843818	True	NM_152791,NM_001172775,NM_003021	chr19,chr19,chr19	+,+,-	ZNF555,ZNF555,SGTA	-1717,-1717,-59738
chr21:47275660-47276525	chr21	+	47275725	47276491	True	NM_006657,NM_020528,NM_001130141	chr21,chr21,chr21	-,+,+	FTCD,PCBP3,PCBP3	299040,-5901,-5901
chr8:7692552-7693232	chr8	+	7692809	7693196	True	NM_080389,NM_001040702,NM_152250	chr8,chr8,chr8	+,+,-	DEFB104A,DEFB104B,DEFB105A	796,796,-11449
chr8:7692552-7693232	chr8	-	7333400	7333788	False	NM_080389,NM_001040702,NM_001040703	chr8,chr8,chr8	-,-,+	DEFB104A,DEFB104B,DEFB105B	-796,-796,11454
chr1:165407021-165408608	chr1	+	165407069	165408485	True	NM_006917,NR_033824,NM_001005214	chr1,chr1,chr1	-,-,+	RXRG,RXRG,LRRC52	6170,6170,104992
chr5:525256-525550	chr5	+	525349	525449	True	NM_007277,NM_004174	chr5,chr5	+,-	EXOC3,SLC9A3	-82066,-800
chr7:73669116-73669362	chr7	+	73669190	73669365	True	NM_181471,NM_003388,NM_002914	chr7,chr7,chr7	-,+,-	RFC2,CLIP2,RFC2	-452,34439,-452
chr22:37916926-37917489	chr22	+	37917079	37917383	True	NM_014550,NM_152243	chr22,chr22	-,+	CARD10,CDC42EP1	-1869,39087
chr1:153540365-153541068	chr1	+	153540391	153541055	True	NM_006271,NM_005978	chr1,chr1	+,-	S100A1,S100A2	59817,-2085
chr11:66085606-66086398	chr11	+	66085722	66086256	True	NM_020404,NM_153266	chr11,chr11	-,+	CD248,TMEM151A	-1207,-26400
chr11:75237435-75237912	chr11	+	75237536	75237738	True	NM_030792,NM_001235	chr11,chr11	-,+	GDPD5,SERPINH1	-937,35431
chr19:53713714-53714152	chr19	+	53713861	53714208	True	NM_024733,NM_173856	chr19,chr19	-,+	ZNF665,VN1R2	-17242,47336
chr2:198625022-198626789	chr2	+	198625037	198626140	True	NM_033030,NM_006226	chr2,chr2	-,+	BOLL,PLCL1	23991,43285
chr19:58842103-58842673	chr19	+	58842177	58842553	True	NM_181846,NM_130786	chr19,chr19	+,-	ZSCAN22,A1BG	-3844,22364
chr1:12956145-12957371	chr1	+	12956187	12957358	True	NM_001012276,NM_001039361	chr1,chr1	+,-	PRAMEF8,PRAMEF10	19091,786
chr1:12956145-12957371	chr1	-	13409870	13410669	False	NM_001012276,NM_001098376	chr1,chr1	-,+	PRAMEF8,PRAMEF15	-19105,10506
chr1:12956145-12957371	chr1	-	13630667	13631466	False	NM_001012276,NM_001098376	chr1,chr1	-,+	PRAMEF8,PRAMEF15	-19117,10506
chr11:124933627-124934111	chr11	+	124933737	124934115	True	NM_198277,NM_001080546,NM_001145290	chr11,chr11,chr11	+,-,+	SLC37A2,TMEM218,SLC37A2	-775,39140,-775
chr7:128579511-128579874	chr7	+	128579573	128579865	True	NM_199349,NM_001098629,NM_032643,NM_001098627,NM_001098630	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	KCP,IRF5,IRF5,IRF5,IRF5	-28800,-1630,-1353,906,-1630
chr5:152892971-152893982	chr5	+	152893050	152893762	True	NM_018691,NM_001114183	chr5,chr5	-,+	FAM114A2,GRIA1	524785,-23017
chr6:143799756-143800732	chr6	+	143799776	143800776	True	NM_182503,NM_003630	chr6,chr6	-,+	ADAT2,PEX3	-27935,-27916
chr1:166810433-166811831	chr1	+	166810504	166811400	True	NM_017542,NM_053053	chr1,chr1	+,-	POGK,TADA1	-1831,34304
chr2:114462398-114462803	chr2	+	114462537	114462839	True	NM_013412,NM_025181	chr2,chr2	+,-	RABL2A,SLC35F5	-77780,51611
chr1:223192125-223192341	chr1	+	223192189	223192349	True	NM_032890,NM_003268	chr1,chr1	+,-	DISP1,TLR5	-203809,124325
chr20:30405573-30407143	chr20	+	30405625	30406721	True	NM_004118,NM_033118	chr20,chr20	-,+	FOXS1,MYLK2	26749,456
chr16:79734557-79736454	chr16	+	79734612	79736480	True	NM_005360,NM_130897	chr16,chr16	-,+	MAF,DYNLRB2	-99990,838373
chr1:6528055-6528473	chr1	+	6528233	6528485	True	NM_148967,NM_001039664,NM_003790,NM_031475,NM_148970,NM_148966,NM_148965	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,-,-	TNFRSF25,TNFRSF25,TNFRSF25,ESPN,TNFRSF25,TNFRSF25,TNFRSF25	-1978,-1978,-1978,-43436,-1978,-1978,-1978
chr19:36120263-36121559	chr19	+	36120364	36121377	True	NM_000704,NM_024321	chr19,chr19	-,+	ATP4A,RBM42	-65804,-435
chr11:47293165-47295048	chr11	+	47293449	47294714	True	NM_130472,NM_130473,NM_130470,NM_130471,NM_130476,NM_130474,NM_130475,NM_003682,NM_001131064,NM_001135943,NM_001135944	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,+,+,+,-,+,+	MADD,MADD,MADD,MADD,MADD,MADD,MADD,MADD,ACP2,MADD,MADD	-2301,-2301,-2573,-2301,-1829,-2301,-1829,-2301,-22992,-1829,-2301
chr20:55926547-55927972	chr20	+	55926585	55927945	True	NM_001190472,NM_001015885,NM_003610	chr20,chr20,chr20	-,+,+	MTRNR2L3,RAE1,RAE1	6983,-18,-491
chr10:35415037-35415399	chr10	+	35415173	35415377	True	NM_182850,NM_182853,NM_181571,NM_183060,NM_183013,NM_001198777,NM_001881	chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,-,+	CREM,CREM,CREM,CREM,CREM,CUL2,CREM	423,423,1010,1010,423,-35603,423
chrX:145699217-145700836	chr16	+	89334142	89334486	False	NR_037705,NM_013275	chr16,chr16	+,-	ZNF778,ANKRD11	-50089,222533
chrX:145699217-145700836	chrX	+	145699371	145700705	True	NM_001144064	chrX	+	CXorf51	190596
chr5:34226216-34228148	chr5	+	34227543	34227747	True	NM_016568,NR_037951	chr5,chr5	+,-	RXFP3,C1QTNF3-AMACR	-291114,-102910
chr1:46248112-46249365	chr1	+	46248420	46248891	True	NM_005897,NM_015112	chr1,chr1	-,+	IPP,MAST2	-31935,20393
chr18:13009754-13010565	chr18	+	13010183	13010380	True	NM_002828,NM_032142	chr18,chr18	-,+	PTPN2,CEP192	-125849,-18881
chr7:90033064-90033421	chr7	+	90033125	90033279	True	NM_006980,NM_001185072,NM_001185073,NM_012129	chr7,chr7,chr7,chr7	-,+,+,+	MTERF,CLDN12,CLDN12,CLDN12	1476787,-528,-528,-528
chr19:35626108-35626493	chr19	+	35626305	35626495	True	NM_005031,NM_021902,NM_139284,NM_022006	chr19,chr19,chr19,chr19	+,+,-,+	FXYD1,FXYD1,LGI4,FXYD7	3896,3236,-127,7658
chr7:100798644-100799231	chr7	+	100798689	100799153	True	NM_003378,NM_001283	chr7,chr7	-,+	VGF,AP1S1	9749,-1054
chr21:35558140-35558797	chr21	+	35558231	35558667	True	NM_001127670,NR_027267,NR_027266	chr21,chr21,chr21	-,+,+	KCNE1,C21orf82,C21orf82	269446,-5304,-5304
chr5:177629490-177629769	chr5	+	177629673	177629737	True	NR_003281,NM_031266,NM_004499	chr5,chr5,chr5	-,+,+	GMCL1L,HNRNPAB,HNRNPAB	-15240,1770,1770
chr5:126852331-126853172	chr5	+	126852516	126853165	True	NM_130809,NM_001164478	chr5,chr5	+,-	PRRC1,FLJ44606	143,-443332
chr19:35629094-35629741	chr19	+	35629105	35629591	True	NM_005031,NM_021902,NM_139284,NM_022006	chr19,chr19,chr19,chr19	+,+,-,+	FXYD1,FXYD1,LGI4,FXYD7	800,140,-2927,4562
chr14:58669224-58669874	chr14	+	58669563	58669751	True	NM_018477,NM_001001872	chr14,chr14	+,-	ACTR10,C14orf37	-2793,-50716
chr2:87294804-87295256	chr2	+	87295097	87295259	True	NR_026846,NM_001024457	chr2,chr2	-,+	LOC285074,RGPD1	8327,-150413
chr2:87294804-87295256	chr2	-	86955721	86955883	False	NM_022780,NM_001198954	chr2,chr2	+,-	RMND5A,RNF103-VPS24	-8358,-7476
chr6:137364951-137365338	chr6	+	137365014	137365335	True	NM_014432,NM_001008783	chr6,chr6	-,+	IL20RA,SLC35D3	1013,-121671
chr1:64935084-64935369	chr1	+	64935154	64935352	True	NM_002227,NM_020925	chr1,chr1	-,+	JAK1,CACHD1	496885,1123
chr16:1922705-1923198	chr16	+	1923005	1923071	True	NM_152764,NM_001163560,NM_001142398	chr16,chr16,chr16	-,-,+	C16orf73,C16orf73,FAHD1	-903,-826,-45845
chr17:9550294-9551192	chr17	+	9550322	9551008	True	NM_153210,NR_033656	chr17,chr17	+,-	USP43,STX8	-1423,-71047
chr10:50819044-50819398	chr10	+	50819205	50819413	True	NM_000124,NM_003055,NM_001142934,NM_001142933,NM_001142929,NM_020549,NM_020984,NM_020985,NM_020986	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,+,+,+,+,+,+,+,+	ERCC6,SLC18A3,CHAT,CHAT,CHAT,CHAT,CHAT,CHAT,CHAT	-72058,-909,2669,2669,2669,2669,-2115,1740,1740
chr11:86012874-86013121	chr11	+	86012898	86013148	True	NR_024596,NM_016401,NM_007166,NR_024598,NR_024597	chr11,chr11,chr11,chr11,chr11	+,+,-,+,+	C11orf73,C11orf73,PICALM,C11orf73,C11orf73	1249,104,-232790,104,104
chr6:76316783-76318031	chr6	+	76317085	76318072	True	NM_015687,NM_015571,NM_001100409	chr6,chr6,chr6	-,+,+	FILIP1,SENP6,SENP6	-113589,-5514,-5514
chr2:238874797-238875177	chr2	+	238874816	238875058	True	NM_080678,NR_037904,NM_030768	chr2,chr2,chr2	+,+,-	UBE2F,UBE2F-SCLY,ILKAP	528,528,237316
chr14:65406294-65406793	chr14	+	65406311	65406649	True	NM_001202559,NM_002083	chr14,chr14	+,-	CHURC1-FNTB,GPX2	-25283,2932
chr2:242834039-242834338	chr2	+	242834060	242834386	True	NM_173821,NM_005018	chr2,chr2	+,-	C2orf85,PDCD1	-22234,-33002
chr16:72199476-72199948	chr16	+	72199646	72199996	True	NM_001160213,NM_031293,NM_014003	chr16,chr16,chr16	-,-,+	PMFBP1,PMFBP1,DHX38	6403,6118,-72082
chr5:93910589-93911485	chr5	+	93910595	93911486	True	NM_001145678,NM_032290	chr5,chr5	-,+	KIAA0825,ANKRD32	42874,42904
chr1:149280734-149282471	chr1	+	149280919	149282306	True	NM_001024599,NR_027002	chr1,chr1	-,+	HIST2H2BF,LOC388692	116974,-1502
chr1:149280734-149282471	chr1	+	149666489	149667876	False	NM_001161334,NM_000566	chr1,chr1	-,+	HIST2H2BF,FCGR1A	116103,86373
chr17:10589481-10590763	chr17	+	10589956	10590777	True	NM_004589,NM_020233	chr17,chr17	-,+	SCO1,C17orf48	10165,10149
chr15:40731281-40731947	chr15	+	40731386	40731982	True	NR_002208,NM_014952	chr15,chr15	-,+	MRPL42P5,BAHD1	92817,1428
chr20:6091742-6091998	chr20	+	6091782	6092004	True	NM_001127458,NM_017671	chr20,chr20	+,-	CRLS1,FERMT1	-103942,12237
chr19:48212358-48213136	chr19	+	48212412	48213074	True	NM_014601,NM_198479	chr19,chr19	+,-	EHD2,TPRX1	3526,93837
chr13:37493567-37493805	chr13	+	37493597	37493697	True	NM_001127217,NM_005905,NM_181503	chr13,chr13,chr13	-,-,+	SMAD9,SMAD9,EXOSC8	762,762,80980
chr17:37559004-37559525	chr17	+	37559053	37559398	True	NM_001184906,NM_015083,NM_032875	chr17,chr17,chr17	-,+,-	FBXL20,CDK12,FBXL20	-1144,58340,-1144
chr22:18922576-18923191	chr22	+	18922581	18923119	True	NM_001195226,NM_005675,NM_016335	chr22,chr22,chr22	-,+,-	PRODH,DGCR6,PRODH	895,-28896,997
chr22:18922576-18923191	chr22	-	20288105	20288155	False	NR_026919,NM_033257	chr22,chr22	+,-	LOC150197,DGCR6L	-94301,19523
chr17:79870080-79870378	chr17	+	79870091	79870307	True	NM_016538,NM_002861,NM_148896,NM_001184917,NR_033682,NR_033683,NR_033681,NR_033685	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,-,-,-,-,-	SIRT7,PCYT2,NPB,PCYT2,PCYT2,PCYT2,PCYT2,PCYT2	5801,-751,-10070,-751,-751,-1014,-751,-1014
chr15:40227738-40228469	chr15	+	40227839	40228487	True	NM_007223,NM_001013703	chr15,chr15	-,+	GPR176,EIF2AK4	-14746,-1556
chr15:32905870-32906418	chr15	+	32906072	32906414	True	NM_014783,NM_199357,NR_036650	chr15,chr15,chr15	+,+,-	ARHGAP11A,ARHGAP11A,LOC100288615	1276,1276,-80130
chr15:32905870-32906418	chr15	+	30916934	30917030	False	NM_148911,NM_001039841	chr15,chr15	-,+	CHRFAM7A,ARHGAP11B	-231070,1848
chr4:39977235-39978115	chr4	+	39977328	39978111	True	NM_001100399,NM_001100400,NM_018177	chr4,chr4,chr4	-,-,+	PDS5A,PDS5A,N4BP2	1515,1515,80412
chrX:48694613-48696286	chrX	+	48694862	48695661	True	NM_013271,NM_181532	chrX,chrX	-,+	PCSK1N,ERAS	-902,-7630
chr17:17379107-17379603	chr17	+	17379150	17379588	True	NM_018019,NM_001199989	chr17,chr17	+,-	MED9,RASD1	711,20171
chr11:62445445-62445861	chr11	+	62445453	62445909	True	NM_015853,NM_001085372,NM_024099	chr11,chr11,chr11	-,+,-	UBXN1,C11orf83,C11orf48	668,-6378,-6212
chr12:58335719-58336499	chr12	+	58335849	58336185	True	NM_005730,NM_033276	chr12,chr12	-,+	CTDSP2,XRCC6BP1	-95102,-455
chr1:152285015-152285800	chr1	+	152285257	152285771	True	NM_002016,NM_178438	chr1,chr1	-,+	FLG,LCE5A	11958,197548
chr3:184867152-184867586	chr3	+	184867205	184867570	True	NM_004721,NM_001025266	chr3,chr3	+,-	MAP3K13,C3orf70	213399,3283
chr16:68299433-68299768	chr16	+	68299465	68299784	True	NM_003983,NM_001076785,NM_024939	chr16,chr16,chr16	+,+,-	SLC7A6,SLC7A6,ESRP2	-1093,-1093,-29329
chr11:64809860-64810104	chr11	+	64809896	64810005	True	NM_005468,NM_013299	chr11,chr11	-,+	NAALADL1,SAC3D1	16063,-1572
chr19:53191815-53192339	chr19	+	53191894	53192380	True	NR_003936,NR_023311	chr19,chr19	-,+	ZNF83,ZNF137P	1556,-92008
chr2:166624474-166625463	chr2	+	166624920	166625306	True	NM_004482,NM_024969	chr2,chr2	-,+	GALNT3,CSRNP3	25555,-196136
chr3:186558289-186558819	chr3	+	186558302	186558649	True	NM_004797,NM_181573,NM_001177800	chr3,chr3,chr3	+,-,+	ADIPOQ,RFC4,ADIPOQ	1813,-33818,1813
chr16:29366366-29367199	chr16	+	29366602	29367172	True	NR_002939,NM_001031827	chr16,chr16	+,-	RUNDC2C,BOLA2	-64112,99163
chr16:29366366-29367199	chr16	+	12136742	12136792	False	NM_001080530,NM_001130007	chr16,chr16	+,-	SNX29,GSPT1	9262,-126223
chr16:29366366-29367199	chr16	+	21387462	21388033	False	NR_026675,NM_130464	chr16,chr16	+,-	NCRNA00169,NPIPL3	-75343,48675
chr6:33083455-33084812	chr6_mcf_hap5	+	4421351	4421431	False	NM_033554,NR_001435	chr6_mcf_hap5,chr6_mcf_hap5	-,+	HLA-DPA1,HLA-DPB2	-43118,-4291
chr6:33083455-33084812	chr6	+	33084534	33084614	True	NM_033554,NR_001435	chr6,chr6	-,+	HLA-DPA1,HLA-DPB2	-43156,-4292
chr6:33083455-33084812	chr6_ssto_hap7	+	4565021	4565101	False	NM_033554,NR_001435	chr6_ssto_hap7,chr6_ssto_hap7	-,+	HLA-DPA1,HLA-DPB2	-43139,-4301
chr6:33083455-33084812	chr6_apd_hap1	+	4371297	4371377	False	NM_033554	chr6_apd_hap1	-	HLA-DPA1	-43118
chr6:33083455-33084812	chr6_cox_hap2	+	4528643	4528723	False	NM_033554,NR_001435	chr6_cox_hap2,chr6_cox_hap2	-,+	HLA-DPA1,HLA-DPB2	-43085,-4301
chr3:77147929-77148268	chr3	+	77148051	77148209	True	NM_001128929,NM_001128223	chr3,chr3	+,-	ROBO2,ZNF717	-950,-1313796
chr2:220173217-220173648	chr2	+	220173292	220173672	True	NM_001199764,NM_001199763,NM_006736,NM_002846	chr2,chr2,chr2,chr2	-,-,+,-	PTPRN,PTPRN,DNAJB2,PTPRN	107,673,-29303,673
chrX:101807138-101808513	chrX	+	101807202	101808483	True	NR_002216,NM_021992	chrX,chrX	+,-	NXF4,TMSB15A	-2369,-35503
chr17:72210058-72210287	chr17	+	72210240	72210334	True	NR_026914,NM_032646	chr17,chr17	-,+	MGC16275,TTYH2	-780,-595
chr1:58700482-58700735	chr1	+	58700493	58700741	True	NM_021080,NR_034014	chr1,chr1	-,+	DAB1,LOC100131060	15520,550081
chr11:10477023-10477819	chr11	+	10477078	10477772	True	NM_001025390,NM_001025389,NM_000480,NM_001172430,NM_001172431,NM_001190702	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,-	AMPD3,AMPD3,AMPD3,AMPD3,AMPD3,MTRNR2L8	-20,-463,-4905,4905,-5261,53001
chrX:102978996-102979220	chrX	+	102979007	102979213	True	NM_001024452,NM_001172285,NM_182541	chrX,chrX,chrX	-,-,+	GLRA4,GLRA4,TMEM31	4389,4389,-13221
chr8:61431137-61431982	chr8	+	61431211	61432015	True	NM_002865,NM_004056	chr8,chr8	+,-	RAB2A,CA8	-1703,-237257
chr2:74007435-74008271	chr2	+	74007434	74008122	True	NM_001080474,NM_003584	chr2,chr2	+,-	C2orf78,DUSP11	3193,-150
chr16:75569970-75570172	chr16	+	75570038	75570116	True	NM_024533,NM_007285	chr16,chr16	-,+	CHST5,GABARAPL2	-970,30132
chr1:162604425-162604868	chr1	+	162604467	162604909	True	NM_001014796,NM_006182,NM_053282	chr1,chr1,chr1	+,+,-	DDR2,DDR2,SH2D1B	-2290,-2290,-222539
chr20:17663002-17663216	chr20	+	17663005	17663263	True	NM_001042576,NM_001159495,NM_004587	chr20,chr20,chr20	-,+,-	RRBP1,BANF2,RRBP1	-77,11056,-77
chr7:140771117-140771417	chr7	+	140771141	140771361	True	NM_053035,NM_001195278	chr7,chr7	-,+	MRPS33,LOC100131199	-56360,2670
chr7:50770026-50771565	chr7	+	50770203	50771303	True	NR_033845,NM_001001550	chr7,chr7	+,-	LOC100129427,GRB10	-170798,1747
chr12:123863756-123864596	chr12	+	123864005	123864309	True	NM_020382,NM_018183	chr12,chr12	+,-	SETD8,SBNO1	4394,-29017
chr17:43139019-43140277	chr17	+	43139100	43140199	True	NM_021079,NM_024819	chr17,chr17	+,-	NMT1,DCAKD	-471,-627
chr10:126851455-126851679	chr10	+	126851455	126851687	True	NM_001083914,NM_001329,NM_017580	chr10,chr10,chr10	-,-,+	CTBP2,CTBP2,ZRANB1	-1831,-2352,-220816
chr1:175941150-175941691	chr1	+	175941169	175941571	True	NM_021936,NR_002998	chr1,chr1	+,-	PAPPA2,SCARNA3	490735,-3493
chr16:2569962-2570167	chr16	+	2569976	2570140	True	NM_001048212,NM_001198569,NM_015944,NM_001145815,NM_001694	chr16,chr16,chr16,chr16,chr16	-,+,+,+,+	CEMP1,ATP6V0C,AMDHD2,AMDHD2,ATP6V0C	11319,-6312,222,222,-6168
chr1:153601441-153601824	chr1	+	153601635	153601853	True	NM_015607,NM_001024211,NM_001024212,NM_001024213,NM_006271,NM_001024210,NM_005979	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,-,+,-,-	CHTOP,S100A13,S100A13,S100A13,S100A1,S100A13,S100A13	4671,-1518,-1891,-2111,-813,4765,-920
chr1:48414039-48415170	chr1	+	48414063	48415061	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	47551,273295
chr20:30866376-30867427	chr20	+	30866400	30867148	True	NM_002657,NM_004798	chr20,chr20	-,+	PLAGL2,KIF3B	-70854,-997
chr11:911691-912452	chr11	+	911778	912377	True	NM_012305,NM_001142675,NM_001142674,NM_001142677,NM_001142676,NM_023947	chr11,chr11,chr11,chr11,chr11,chr11	+,-,-,-,-,-	AP2A2,CHID1,CHID1,CHID1,CHID1,CHID1	13463,2732,-904,-904,-904,-904
chr19:18390681-18391042	chr19	+	18390784	18390854	True	NM_001145304,NR_036155,NM_005354,NM_001145305,NM_025249	chr19,chr19,chr19,chr19,chr19	-,+,-,-,-	KIAA1683,MIR3188,JUND,KIAA1683,KIAA1683	-5465,2032,1630,-5465,-5465
chr17:74023729-74024010	chr17	+	74023729	74023877	True	NM_001258,NM_001988	chr17,chr17	+,-	CDK3,EVPL	-26793,-222
chr21:44808224-44808444	chr21	+	44808267	44808391	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	61512,38661
chr5:101827466-101828206	chr5	+	101827921	101828122	True	NM_000919,NM_173488	chr5,chr5	+,-	PAM,SLCO6A1	373404,6649
chr7:27225770-27227427	chr7	+	27225846	27227234	True	NM_005523,NR_002795,NM_153715,NR_037940,NR_037939	chr7,chr7,chr7,chr7,chr7	-,+,-,-,-	HOXA11,HOXA11-AS1,HOXA10,HOXA10-HOXA9,HOXA10	-1011,-870,-5970,-5966,-5966
chr17:62774170-62774502	chr17	+	62774260	62774430	True	NR_026899,NM_138363,NR_027487	chr17,chr17,chr17	-,+,-	LOC146880,CCDC45,LOC146880	3737,-271157,3242
chr21:43808630-43809733	chr21	+	43808780	43809721	True	NM_024022,NM_032405,NM_001001895,NR_027348	chr21,chr21,chr21,chr21	-,-,+,-	TMPRSS3,TMPRSS3,UBASH3A,TMPRSS3	6530,6530,14297,1
chr1:86047121-86047483	chr1	+	86047137	86047486	True	NM_001554,NM_001134445	chr1,chr1	+,-	CYR61,DDAH1	-744,-3091
chr6:41130805-41132129	chr6	+	41130844	41132080	True	NM_018965,NR_026938,NM_178174	chr6,chr6,chr6	-,+,-	TREM2,LOC221442,TREML1	78,-62122,-8774
chr4:68814169-68815296	chr4	+	68814354	68815200	True	NM_001114387,NR_015446	chr4,chr4	-,+	TMPRSS11A,FTLP10	14089,232809
chr19:19054453-19055194	chr19	+	19054499	19054839	True	NM_004838,NR_027297,NM_001145722,NM_001145721,NR_033677,NM_001145724	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,+,-	HOMER3,HOMER3,HOMER3,HOMER3,DDX49,HOMER3	-2458,-4055,-3386,-3338,-24066,-4641
chr12:51592340-51593213	chr12	+	51592504	51593203	True	NM_002702,NM_001136264	chr12,chr12	-,+	POU6F1,DAZAP2	-554,39304
chr6:96503487-96503718	chr6	+	96503486	96503766	True	NM_001143957,NM_006581	chr6,chr6	-,+	GPR63,FUT9	781641,-39697
chr16:85222759-85223676	chr16	+	85222808	85223716	True	NR_033984,NM_198491	chr16,chr16	+,-	LOC400548,FAM92B	-52116,-76694
chr15:65370092-65370300	chr15	+	65370188	65370346	True	NM_001101362,NM_016563	chr15,chr15	+,-	KBTBD13,RASL12	-1085,-9800
chr20:42359904-42360369	chr20	+	42359908	42360336	True	NM_001008901,NM_176791,NM_002466	chr20,chr20,chr20	-,-,+	GTSF1L,GTSF1L,MYBL2	-4266,-4266,-64250
chr12:45442365-45443221	chr12	+	45442668	45443265	True	NM_001004329,NM_001025356	chr12,chr12	-,+	DBX2,ANO6	1675,166504
chr19:41820340-41820761	chr19	+	41820340	41820626	True	NM_052848,NM_000660	chr19,chr19	+,-	CCDC97,TGFB1	-4298,39255
chr11:6342443-6342728	chr11	+	6342450	6342732	True	NM_176875,NM_145040	chr11,chr11	+,-	CCKBR,PRKCDBP	-61535,-710
chr1:40780271-40780605	chr1	+	40780277	40780583	True	NM_005857,NM_001852	chr1,chr1	+,-	ZMPSTE24,COL9A2	-56595,2406
chr19:15729456-15730128	chr19	+	15729552	15730128	True	NM_007253,NM_052890	chr19,chr19	+,-	CYP4F8,PGLYRP2	-3575,-139237
chr1:44462021-44462271	chr1	+	44462131	44462271	True	NM_152499,NM_006934	chr1,chr1	+,-	CCDC24,SLC6A9	-4902,20776
chr1:246898992-246899723	chr1	+	246899304	246899547	True	NM_022366,NM_016002	chr1,chr1	-,+	TFB2M,SCCPDH	-169739,-11988
chr9:98786208-98787734	chr9	+	98786282	98787356	True	NR_033838,NR_024129	chr9,chr9	+,-	LOC158435,NCRNA00092	40764,-2245
chr7:71803225-71803749	chr7	+	71803259	71803776	True	NR_001588,NM_001017440	chr7,chr7	+,-	SBDSP1,CALN1	496175,-1051
chr6:35989428-35989739	chr6	+	35989427	35989514	True	NM_052961,NM_001193476,NM_001315,NM_139014,NM_139013,NM_139012,NM_138718	chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,-,+,+,+,+,-	SLC26A8,SLC26A8,MAPK14,MAPK14,MAPK14,MAPK14,SLC26A8	2960,2852,5939,5939,5939,5939,2824
chr22:25830791-25832493	chr22	+	25831097	25832238	True	NM_001135772,NR_033733	chr22,chr22	-,+	LRP5L,CRYBB2P1	-53553,11815
chr2:173626163-173628068	chr2	+	173626478	173628068	True	NR_026995,NM_007023	chr2,chr2	-,+	LOC91149,RAPGEF4	-25544,-26004
chr13:51662106-51662989	chr13	+	51662150	51663005	True	NR_003923,NM_145019	chr13,chr13	-,+	GUCY1B2,FAM124A	-21857,133501
chr14:98667266-98667678	chr14	+	98667373	98667689	True	NR_015430,NM_182560	chr14,chr14	-,+	C14orf64,C14orf177	-222912,510260
chr5:78283741-78284712	chr5	+	78283873	78284412	True	NM_000046,NM_001178005,NM_198709	chr5,chr5,chr5	-,+,-	ARSB,BHMT2,ARSB	-1516,81134,-2107
chr6:138027040-138028526	chr6	+	138027062	138028309	True	NM_175747,NM_006290	chr6,chr6	-,+	OLIG3,TNFAIP3	-211531,160271
chr19:42934039-42934467	chr19	+	42934417	42934479	True	NM_001410,NM_005357	chr19,chr19	+,-	MEGF8,LIPE	-104715,-2839
chr20:5890619-5891656	chr20	+	5890910	5891676	True	NM_001819,NM_015939	chr20,chr20	+,-	CHGB,TRMT6	297,39552
chr16:27323706-27324093	chr16	+	27323919	27324115	True	NM_000418,NM_001008699,NM_145080	chr16,chr16,chr16	+,+,-	IL4R,IL4R,NSMCE1	1135,1135,-43806
chr7:54273787-54275513	chr7	+	54273838	54275547	True	NM_182546,NR_004422	chr7,chr7	+,-	VSTM2A,HPVC1	334471,-3724
chr1:19600267-19600541	chr1	+	19600288	19600454	True	NM_001145289,NM_201252,NM_016183	chr1,chr1,chr1	-,-,+	AKR7L,AKR7L,MRTO4	164,164,-22264
chr8:7441254-7441937	chr8	+	7441736	7441826	True	NM_001040705,NM_001136572	chr8,chr8	+,-	DEFB107B,FAM90A7	-88419,-1561
chr8:7441254-7441937	chr8	+	7889728	7889818	False	NR_027424,NR_003668	chr8,chr8	+,-	FAM66E,DEFB109P1B	-77244,-34685
chr2:165971982-165972831	chr2	+	165971981	165972879	True	NM_001040142,NM_001081676	chr2,chr2	+,-	SCN2A,SCN3A	123032,87756
chr11:108340963-108341316	chr11	+	108341000	108341198	True	NM_004398,NM_152587	chr11,chr11	+,-	DDX10,C11orf65	194617,-2742
chr8:145982817-145983722	chr8	+	145982832	145983560	True	NM_138367,NM_213605	chr8,chr8	-,+	ZNF251,ZNF517	-1862,40700
chr16:21223046-21224488	chr16	+	21223095	21224323	True	NM_145865,NM_003460	chr16,chr16	+,-	ANKS4B,ZP2	20692,-227
chr12:96794838-96795222	chr12	+	96794844	96795247	True	NM_001170464,NM_002595,NM_005230	chr12,chr12,chr12	-,-,+	CDK17,CDK17,ELK3	-478,-478,-206688
chr6:26596073-26596300	chr6	+	26596077	26596339	True	NM_013375,NM_024639	chr6,chr6	+,-	ABT1,ZNF322A	840,63674
chr1:151005111-151005543	chr1	+	151005204	151005270	True	NM_138278,NM_001159642,NM_018379	chr1,chr1,chr1	+,+,-	BNIPL,BNIPL,FAM63A	3758,3758,-24350
chr21:39660973-39662142	chr21	+	39661256	39662191	True	NM_005867,NM_170737	chr21,chr21	-,+	DSCR4,KCNJ15	-167802,-16878
chr1:197106817-197107573	chr1	+	197107039	197107447	True	NM_018136,NM_001193640	chr1,chr1	-,+	ASPM,CRB1	8433,129886
chr6:151645413-151646538	chr6	+	151645470	151646560	True	NM_144497,NM_020861	chr6,chr6	+,-	AKAP12,ZBTB2	105,66167
chrX:54385315-54385519	chrX	+	54385439	54385567	True	NM_001002838,NM_020922,NM_058163	chrX,chrX,chrX	-,-,+	WNK3,WNK3,TSR2	-1001,-1001,81285
chr2:109335095-109335313	chr2	+	109335094	109335233	True	NM_022336,NM_006267	chr2,chr2	-,+	EDAR,RANBP2	270649,703
chr21:46348276-46349086	chr21	+	46348290	46349053	True	NM_058190,NM_000211,NM_001127491	chr21,chr21,chr21	+,-,-	C21orf70,ITGB2,ITGB2	10901,-7325,110
chr7:66092965-66093230	chr7	+	66093113	66093225	True	NM_153033,NM_001167961,NR_002933	chr7,chr7,chr7	+,+,-	KCTD7,KCTD7,LOC493754	642,642,-49615
chr5:34702162-34702902	chr5	+	34702205	34702774	True	NR_026591,NM_001145523	chr5,chr5	-,+	RAD1,RAI14	213014,-14592
chr1:154296222-154297976	chr1	+	154296473	154297785	True	NM_080429,NM_020452,NM_138740,NM_001005855	chr1,chr1,chr1,chr1	+,+,-,+	AQP10,ATP8B2,C1orf43,ATP8B2	-2934,2490,-103200,250
chr3:128998662-129000456	chr3	+	128998695	129000233	True	NM_006026,NM_001006109,NM_020187	chr3,chr3,chr3	-,+,+	H1FX,C3orf37,C3orf37	34949,-929,-1062
chr19:4517802-4518004	chr19	+	4517825	4517953	True	NM_032631,NM_001080400	chr19,chr19	+,-	HDGFRP2,PLIN4	-45621,-109
chr3:149098659-149099572	chr3	+	149099214	149099593	True	NM_004617,NM_014220	chr3,chr3	+,-	TM4SF4,TM4SF1	92774,-3646
chr2:209006651-209007441	chr2	+	209006761	209007410	True	NM_005210,NM_001178000	chr2,chr2	-,+	CRYGB,PIKFYVE	3519,123580
chr3:186648216-186648419	chr3	+	186648240	186648464	True	NM_181573,NM_173217,NM_173216	chr3,chr3,chr3	-,+,+	RFC4,ST6GAL1,ST6GAL1	-123756,10,10
chr16:23653411-23653962	chr16	+	23653541	23653771	True	NM_001199011,NM_032486,NR_037573,NM_001199743,NM_024675	chr16,chr16,chr16,chr16,chr16	+,+,+,+,-	DCTN5,DCTN5,DCTN5,DCTN5,PALB2	-913,-913,-913,-913,-863
chr21:33955821-33956352	chr21	+	33955970	33956163	True	NM_058187,NM_144659	chr21,chr21	+,-	C21orf63,TCP10L	-171269,1733
chr7:20878570-20880396	chr7	+	20878989	20880204	True	NM_198956,NR_026673	chr7,chr7	-,+	SP8,RPL23P8	-52481,-12123
chr9:77501533-77502092	chr9	+	77501541	77501967	True	NM_012383,NM_001177310,NM_001177311,NM_017662	chr9,chr9,chr9,chr9	+,-,-,-	OSTF1,TRPM6,TRPM6,TRPM6	201430,719,346,1093
chr8:6692538-6692829	chr8	+	6692552	6692806	True	NM_207411,NM_018361	chr8,chr8	-,+	XKR5,AGPAT5	410,-126725
chr2:28112815-28113113	chr2	+	28112867	28113027	True	NM_004899,NM_199191,NM_199192,NM_199193,NM_199194,NM_022128,NR_028308	chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,+,-,-	BRE,BRE,BRE,BRE,BRE,RBKS,LOC100302650	529,529,529,454,454,246,1004
chr3:186560384-186561932	chr3	+	186560510	186561901	True	NM_004797,NM_181573,NM_001177800	chr3,chr3,chr3	+,-,+	ADIPOQ,RFC4,ADIPOQ	-98,-36026,-98
chr3:192432600-192433953	chr3	+	192432816	192433889	True	NM_020386,NM_004113	chr3,chr3	+,-	HRASLS,FGF12	525028,11558
chr3:49041166-49042476	chr3	+	49041282	49042489	True	NM_001009996,NM_018031	chr3,chr3	-,+	DALRD3,WDR6	13578,2147
chr17:78312216-78312602	chr17	+	78312215	78312316	True	NR_029376,NM_001164638	chr17,chr17	-,+	LOC100294362,FLJ35220	76711,76650
chr11:131240973-131241400	chr11	+	131241001	131241317	True	NM_001048209,NM_014758	chr11,chr11	+,-	NTM,SNX19	-681,-454619
chr6:14727433-14727695	chr6	+	14727444	14727720	True	NM_001031713,NM_004973	chr6,chr6	-,+	CCDC90A,JARID2	-912655,518806
chr15:91413937-91414377	chr15	+	91414013	91414410	True	NM_198527,NM_002569	chr15,chr15	-,+	HDDC3,FURIN	61414,-2179
chr5:113782313-113783953	chr5	+	113782805	113784005	True	NM_170775,NM_018700	chr5,chr5	+,-	KCNN2,TRIM36	-13642,732295
chr11:68040771-68041909	chr11	+	68040826	68041927	True	NM_022338,NM_002335	chr11,chr11	-,+	C11orf24,LRP5	-1357,38180
chr6:127646489-127647004	chr6	+	127646488	127646946	True	NM_030963,NM_001139510	chr6,chr6	+,-	RNF146,ECHDC1	-58524,16656
chr13:54851342-54851766	chr13	+	54851510	54851790	True	NR_031628,NM_006418	chr13,chr13	-,+	MIR1297,OLFM4	34443,-1248695
chr12:123214906-123215149	chr12	+	123214932	123215200	True	NM_032554,NM_003677	chr12,chr12	-,+	GPR81,DENR	-9,22170
chr16:53535929-53536505	chr16	+	53535982	53536430	True	NM_022476,NM_001012398,NM_005611	chr16,chr16,chr16	-,-,+	AKTIP,AKTIP,RBL2	790,790,-67686
chr10:127441903-127442591	chr10	+	127441987	127442365	True	NM_147191,NM_015608	chr10,chr10	-,+	MMP21,C10orf137	22087,-33955
chr8:104383297-104383645	chr8	+	104383394	104383484	True	NM_138455,NM_030780	chr8,chr8	+,-	CTHRC1,SLC25A32	301,44034
chr7:130367048-130368530	chr7	+	130367613	130368482	True	NR_029899,NM_052933	chr7,chr7	+,-	MIR335,TSGA13	-231712,2981
chr19:694490-695153	chr19	+	694572	695120	True	NM_214710,NM_001040134	chr19,chr19	-,+	PRSS57,PALM	391,13832
chr10:99608962-99609381	chr10	+	99609001	99609223	True	NM_003015,NM_001010917	chr10,chr10	-,+	SFRP5,GOLGA7B	-77245,772
chr9:114388721-114389361	chr9	+	114388822	114389176	True	NM_004125,NM_001015882,NR_037148,NR_034087	chr9,chr9,chr9,chr9	+,+,+,-	DNAJC25-GNG10,DNAJC25,DNAJC25,C9orf29	4455,4455,4455,-12989
chr6:26445687-26446059	chr6	+	26445794	26446074	True	NM_197974,NM_006994,NM_003543	chr6,chr6,chr6	+,+,-	BTN3A3,BTN3A3,HIST1H4H	-5158,-5158,-160067
chr6:145967026-145967414	chr6	+	145967064	145967284	True	NM_000838,NM_001018041	chr6,chr6	+,-	GRM1,EPM2A	381497,89757
chr1:145574557-145574997	chr1	+	145574675	145575019	True	NM_006099,NM_001012758	chr1,chr1	+,-	PIAS3,NUDT17	968,14466
chr10:125428684-125429088	chr10	+	125428714	125429128	True	NM_198148,NM_153442	chr10,chr10	-,+	CPXM2,GPR26	222422,-2894
chr3:122281120-122283001	chr3	+	122281451	122282990	True	NM_031458,NM_001146105,NM_001146106,NM_138287,NM_001146104,NM_001146103,NM_001146102	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,+,-,-,-	PARP9,PARP9,PARP9,DTX3L,PARP9,PARP9,PARP9	583,207,254,194,254,583,207
chr7:37486721-37487415	chr7	+	37486751	37486999	True	NM_181791,NM_014800	chr7,chr7	+,-	GPR141,ELMO1	292996,1562
chr11:93270286-93271010	chr11	+	93270509	93271003	True	NM_033395,NM_020179	chr11,chr11	+,-	KIAA1731,C11orf75	123812,5593
chr21:47404031-47405334	chr21	+	47404093	47404361	True	NM_001848,NM_006657	chr21,chr21	+,-	COL6A1,FTCD	-2481,171170
chr1:43612607-43613171	chr1	+	43612892	43613171	True	NM_001101376,NM_006824	chr1,chr1	+,-	FAM183A,EBNA1BP2	422,24865
chr5:94891037-94892433	chr5	+	94891065	94892326	True	NM_014639,NM_198150	chr5,chr5	-,+	TTC37,ARSK	-356,-291
chr6:11538469-11538733	chr6	+	11538525	11538779	True	NM_001142393,NM_001100829	chr6,chr6	-,+	NEDD9,TMEM170B	-155944,-65
chr16:10969225-10969936	chr16	+	10969228	10969456	True	NM_000246,NM_001079512	chr16,chr16	+,-	CIITA,FAM18A	1598,-56607
chr4:156878494-156879698	chr4	+	156879322	156879712	True	NM_005651,NM_001334	chr4,chr4	+,-	TDO2,CTSO	-54536,-4274
chr18:77792786-77793402	chr18	+	77792871	77793099	True	NM_024805,NM_001171967,NM_006701	chr18,chr18,chr18	+,+,-	RBFA,RBFA,TXNL4A	1246,1246,-44339
chrX:151868569-151869059	chrX	+	151868626	151869090	True	NM_001129826,NM_005363,NM_001129828,NM_175868,NM_004909,NM_001080848	chrX,chrX,chrX,chrX,chrX,chrX	-,+,-,+,-,-	CSAG3,MAGEA6,CSAG3,MAGEA6,CSAG2,CSAG2	8630,-1432,8707,-1432,8707,8707
chrX:151868569-151869059	chrX	-	151936386	151936850	False	NM_001129826,NM_001129828,NM_005362,NM_004909,NM_001080848	chrX,chrX,chrX,chrX,chrX	+,+,-,+,+	CSAG3,CSAG3,MAGEA3,CSAG2,CSAG2	-8626,-8703,1440,-8703,-8703
chr15:40215484-40215857	chr15	+	40215715	40215885	True	NM_007223,NM_001013703	chr15,chr15	-,+	GPR176,EIF2AK4	-2622,10461
chr16:55846639-55847049	chr16	+	55846642	55847080	True	NR_003276,NM_001025194	chr16,chr16	+,-	CES1P1,CES1	-52182,20045
chr14:75594497-75595141	chr14	+	75594532	75595071	True	NM_033116,NM_024643	chr14,chr14	-,+	NEK9,FAM164C	-754,-58284
chr4:57253702-57254367	chr4	+	57253727	57254330	True	NM_006452,NM_181806	chr4,chr4	+,-	PAICS,AASDH	47584,-89
chr3:113417435-113417886	chr3	+	113417537	113417855	True	NM_001690,NM_001009899	chr3,chr3	+,-	ATP6V1A,KIAA2018	48010,-2044
chr17:18009760-18010563	chr17	+	18009853	18010565	True	NM_016239,NM_145691	chr17,chr17	+,-	MYO15A,ATPAF2	1454,-67373
chr1:110024058-110024777	chr1	+	110024294	110024778	True	NM_020703,NM_153340	chr1,chr1	-,+	AMIGO1,ATXN7L2	27608,1782
chr12:56616064-56616739	chr12	+	56616419	56616739	True	NM_173596,NM_194359,NM_005785,NM_194358,NM_001135195,NM_024068	chr12,chr12,chr12,chr12,chr12,chr12	+,-,-,-,+,+	SLC39A5,RNF41,RNF41,RNF41,SLC39A5,OBFC2B	7080,-684,-715,-715,7761,1385
chr1:121280020-121280290	chr1	+	121280046	121280330	True	NR_003955,NM_001017986	chr1,chr1	+,-	EMBP1,FCGR1B	-19188,-344102
chr1:151320131-151321418	chr1	+	151320158	151320862	True	NM_000449,NM_002796,NM_001025603	chr1,chr1,chr1	-,+,-	RFX5,PSMB4,RFX5	-389,51178,-389
chr2:37462720-37462956	chr2	+	37462720	37462787	True	NM_144736,NM_005760,NM_001083946	chr2,chr2,chr2	+,-,+	C2orf56,CEBPZ,C2orf56	-3997,-3980,-3997
chr3:85816459-85817316	chr3	+	85816462	85817045	True	NR_033860,NM_153184	chr3,chr3	-,+	LOC440970,CADM2	-897736,-40882
chr16:66612480-66612872	chr16	+	66612644	66612841	True	NM_144673,NM_001199317,NM_004614	chr16,chr16,chr16	+,+,-	CMTM2,CMTM2,TK2	509,509,-28329
chr18:55815882-55816643	chr18	+	55815992	55816624	True	NM_005603,NM_001144965,NM_001144971,NM_001144969,NM_001144968	chr18,chr18,chr18,chr18,chr18	-,+,+,+,+	ATP8B1,NEDD4L,NEDD4L,NEDD4L,NEDD4L	-345665,-60,-60,-60,-60
chr11:28128044-28129263	chr11	+	28128713	28129261	True	NM_031217,NM_152636,NM_001113528	chr11,chr11,chr11	-,+,+	KIF18A,METTL15,METTL15	535,536,536
chr3:187455334-187455619	chr3	+	187455437	187455660	True	NM_001134738,NM_001130845,NM_001706,NR_034062	chr3,chr3,chr3,chr3	-,-,-,+	BCL6,BCL6,BCL6,LOC100131635	-2742,-1152,7903,-35334
chr8:67686844-67687304	chr8	+	67686859	67687151	True	NR_002734,NM_013257,NM_170709	chr8,chr8,chr8	-,+,+	PTTG3P,SGK3,SGK3	-6619,264,264
chr14:23772414-23772803	chr14	+	23772542	23772704	True	NM_001199864,NM_001199839,NM_004050,NR_026862	chr14,chr14,chr14,chr14	+,+,+,-	BCL2L2-PABPN1,BCL2L2,BCL2L2,PPP1R3E	3266,3364,3266,-485
chr12:72360488-72362375	chr12	+	72360504	72362242	True	NM_173353,NR_024072	chr12,chr12	+,-	TPH2,MRS2P2	-27943,-115741
chr20:23422537-23423484	chr20	+	23422637	23423523	True	NM_080830,NM_138283	chr20,chr20	-,+	CST11,CSTL1	10009,-2366
chr12:25793298-25793687	chr12	+	25793299	25793595	True	NM_001164748,NM_001145727	chr12,chr12	+,-	RASSF8,IFLTD1	318368,7951
chr13:19664921-19666434	chr13	+	19665026	19666345	True	NR_002801,NR_026852	chr13,chr13	-,+	PHF2P1,LOC348021	26129,-82678
chr14:72013348-72014169	chr14	+	72013415	72013781	True	NM_015556,NM_033141	chr14,chr14	+,-	SIPA1L1,MAP3K9	-17437,-737527
chr19:39898297-39898880	chr19	+	39898348	39898878	True	NM_019088,NM_003407,NM_022835	chr19,chr19,chr19	-,+,+	PAF1,ZFP36,PLEKHG2	-16669,-912,4871
chr17:30719636-30721189	chr17	+	30719809	30720954	True	NM_003457,NM_022344	chr17,chr17	+,-	ZNF207,C17orf75	-42716,-50620
chr1:78361023-78361404	chr1	+	78361079	78361272	True	NM_144573,NM_003902,NM_001172309	chr1,chr1,chr1	+,-,+	NEXN,FUBP1,NEXN	-6937,83558,-6937
chr21:41240004-41240748	chr21	+	41240003	41240779	True	NR_026543,NM_006198	chr21,chr21	-,+	C21orf88,PCP4	-255254,-713
chr3:129830358-129830833	chr3	+	129830513	129830727	True	NM_001136152,NR_024252	chr3,chr3	+,-	ALG1L2,LOC729375	-29890,-237
chr21:47601696-47602020	chr21	+	47601751	47601957	True	NR_002776,NM_001142854,NM_032261	chr21,chr21,chr21	+,-,-	MCM3AP-AS1,C21orf56,C21orf56	47200,2466,2466
chr12:72339836-72340048	chr12	+	72339844	72340080	True	NM_173353,NR_024072	chr12,chr12	+,-	TPH2,MRS2P2	-7269,-95081
chr1:7910952-7911183	chr1	+	7910955	7911221	True	NM_006786,NM_021995,NM_016831	chr1,chr1,chr1	-,-,+	UTS2,UTS2,PER3	1933,2380,-66244
chr9:130545563-130547342	chr9	+	130545633	130547237	True	NR_036055,NM_170600,NM_001261	chr9,chr9,chr9	+,-,+	MIR2861,SH2D3C,CDK9	959,-4585,1067
chr11:109959451-109960659	chr11	+	109959623	109960705	True	NM_033390,NM_002906	chr11,chr11	+,-	ZC3H12C,RDX	3381,206790
chr16:67382453-67383957	chr16	+	67382655	67383454	True	NM_001100915,NM_001161575	chr16,chr16	-,+	KCTD19,LRRC36	-21994,-1449
chr2:198841464-198842694	chr2	+	198841483	198842713	True	NM_006226,NM_197970	chr2,chr2	+,-	PLCL1,BOLL	-172108,-190545
chr3:185265466-185265914	chr3	+	185265685	185265819	True	NM_021627,NM_139248	chr3,chr3	+,-	SENP2,LIPH	38211,4600
chr11:57227831-57228177	chr11	+	57227874	57228076	True	NM_017611,NM_178570	chr11,chr11	-,+	SLC43A3,RTN4RL2	-32821,262
chr21:37508896-37509132	chr21	+	37508949	37509013	True	NM_017438,NM_001236	chr21,chr21	-,+	SETD4,CBR3	-76133,-1737
chr11:7718210-7718742	chr11	+	7718246	7718535	True	NM_198185,NR_027711	chr11,chr11	-,+	OVCH2,OR5E1P	9463,152062
chr13:25747386-25749293	chr13	+	25747387	25748733	True	NM_199138,NM_152704,NM_030979	chr13,chr13,chr13	-,-,+	FAM123A,FAM123A,PABPC3	-1530,-1530,-77162
chr2:162908682-162909493	chr2	+	162909162	162909450	True	NM_001935,NM_012198	chr2,chr2	-,+	DPP4,GCA	21652,291132
chr1:12702726-12703634	chr1	+	12702886	12703445	True	NM_001013630,NM_004753	chr1,chr1	+,-	AADACL4,DHRS3	1120,-25066
chr17:81038372-81038635	chr17	+	81038394	81038639	True	NM_001009905,NM_001004431	chr17,chr17	-,+	B3GNTL1,METRNL	-28708,-878
chr20:23805249-23806272	chr20	+	23805270	23806298	True	NM_001322,NR_001279	chr20,chr20	-,+	CST2,CSTT	1064,-305538
chr13:103244702-103246636	chr13	+	103244915	103246564	True	NM_003291,NM_001010977	chr13,chr13	+,-	TPP2,METTL21C	2721,100349
chr3:126235661-126236188	chr3	+	126235691	126236106	True	NM_152889,NM_001165974,NM_144639	chr3,chr3,chr3	+,-,-	CHST13,UROC1,UROC1	7069,561,561
chr3:148445257-148445547	chr3	+	148445295	148445523	True	NM_003071,NM_032049	chr3,chr3	-,+	HLTF,AGTR1	358874,2443
chr18:32956000-32956622	chr18	+	32956077	32956658	True	NM_145756,NR_024566	chr18,chr18	-,+	ZNF396,ZNF271	693,-85894
chr7:74283894-74284198	chr7	+	74284048	74284109	True	NM_173537,NR_027775	chr7,chr7	-,+	GTF2IRD2,PMS2P5	-16207,22784
chr11:17099391-17099764	chr11	+	17099392	17099790	True	NM_005013,NM_001017	chr11,chr11	+,-	NUCB2,RPS13	198495,-172
chr2:198843123-198843899	chr2	+	198843378	198843912	True	NM_006226,NM_197970	chr2,chr2	+,-	PLCL1,BOLL	-174010,-192440
chr17:44372540-44373073	chr17	+	44372610	44372688	True	NM_001103154,NM_014834	chr17,chr17	-,+	ARL17B,LRRC37A	66496,-164
chr17:44372540-44373073	chr17	+	44590189	44590249	False	NM_001006607,NM_016632	chr17,chr17	+,-	LRRC37A2,ARL17A	-164,66889
chr17:44372540-44373073	chr17	-	43627512	43627590	False	NR_002940,NR_037772	chr17,chr17	-,+	LRRC37A4,CRHR1	-29623,70119
chr13:48989708-48990530	chr13	+	48989895	48990577	True	NM_000321,NM_001162498	chr13,chr13	+,-	RB1,LPAR6	-112064,-2242
chr12:71314266-71314526	chr12	+	71314292	71314572	True	NM_002849,NM_003667	chr12,chr12	-,+	PTPRR,LGR5	62,519240
chr2:241396355-241396772	chr2	+	241396470	241396798	True	NR_024014,NR_029702	chr2,chr2	-,+	PP14571,MIR149	-353,-1103
chr13:53024935-53025392	chr13	+	53025018	53025204	True	NM_001098525,NM_018204,NM_016075	chr13,chr13,chr13	+,+,-	CKAP2,CKAP2,VPS36	4290,4290,-255
chr10:73611319-73611788	chr10	+	73611482	73611606	True	NM_001042466,NM_001042465,NM_002778,NM_001171936	chr10,chr10,chr10,chr10	-,-,-,+	PSAP,PSAP,PSAP,CDH23	-400,-400,-400,-39893
chr1:47086448-47087276	chr1	+	47086572	47087145	True	NM_201403,NM_001145474,NM_145279	chr1,chr1,chr1	-,+,-	MOBKL2C,C1orf223,MOBKL2C	-4009,50354,-5767
chr5:150039486-150040067	chr5	+	150039583	150040017	True	NM_001122853,NM_018047,NM_133371	chr5,chr5,chr5	+,-,+	MYOZ3,RBM22,MYOZ3	386,40708,386
chr1:46584318-46586167	chr1	+	46584552	46585899	True	NM_003629,NM_005727	chr1,chr1	-,+	PIK3R3,TSPAN1	12540,54849
chr6:170189223-170189645	chr6	+	170189227	170189681	True	NR_026781,NR_026780	chr6,chr6	-,+	NCRNA00242,C6orf208	9290,487
chr19:43099092-43099843	chr19	+	43099248	43099860	True	NM_001816,NR_036584	chr19,chr19	-,+	CEACAM8,LOC100289650	-166,226154
chr16:18990623-18990836	chr16	+	18990734	18990848	True	NM_015092,NM_024847,NM_001160364	chr16,chr16,chr16	-,+,+	SMG1,TMC7,TMC7	-53008,4407,4760
chr10:126153006-126153729	chr10	+	126153123	126153623	True	NM_001146340,NM_022126,NM_001167880	chr10,chr10,chr10	-,+,+	NKX1-2,LHPP,LHPP	-14573,-2833,-2833
chr1:109642285-109643026	chr1	+	109642421	109642896	True	NM_001122961,NM_020141,NR_003023	chr1,chr1,chr1	-,+,+	C1orf194,TMEM167B,SCARNA2	13633,-9076,56
chr2:232574348-232574651	chr2	+	232574368	232574614	True	NM_001099285,NR_036052,NR_036263,NR_036262,NM_002823,NM_002601	chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,+,-	PTMA,MIR1244-1,MIR1244-3,MIR1244-2,PTMA,PDE6D	-1184,3409,3409,3409,-1184,71410
chr18:47023556-47023803	chr18	+	47023587	47023678	True	NM_001199356,NM_001199340,NM_001199343,NM_001199342,NM_001199345,NM_001199344,NR_031720,NM_001035006,NM_001035005,NM_001199346,NM_000985,NM_001199355,NR_002571,NR_002572,NR_002573,NR_003701,NM_001199341	chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18	-,-,-,-,-,-,+,-,-,-,-,-,-,-,-,-,-	RPL17-C18ORF32,RPL17,RPL17,RPL17,RPL17,RPL17,MIR1539,RPL17,C18orf32,C18orf32,RPL17,RPL17-C18ORF32,SNORD58A,SNORD58B,U58,SNORD58C,RPL17	-4652,-4652,-4753,-4753,-4652,-4753,-9895,-4652,-9943,-9943,-4652,-5633,-5870,-5488,-7909,-7893,-4753
chr1:39348838-39350117	chr1	+	39349054	39349685	True	NR_037633,NR_037637,NR_037636,NR_037635,NR_037634,NM_030772,NM_001136275	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,-,+	GJA9-MYCBP,GJA9-MYCBP,GJA9-MYCBP,GJA9-MYCBP,GJA9-MYCBP,GJA9,AKIRIN1	-1756,-1756,-1756,-1756,-1756,-1756,107230
chr7:92465222-92465718	chr7	+	92465238	92465482	True	NM_001259,NR_026902,NM_001145306	chr7,chr7,chr7	-,+,-	CDK6,MGC16142,CDK6	-2007,-297500,509
chr17:73999369-73999630	chr17	+	73999389	73999641	True	NM_001258,NM_007292,NM_001988	chr17,chr17,chr17	+,-,-	CDK3,ACOX1,EVPL	-2453,-23874,23916
chr20:31822749-31824486	chr20	+	31823168	31824373	True	NM_016583,NM_016082,NM_130852	chr20,chr20,chr20	+,-,+	PLUNC,CDK5RAP1,PLUNC	35,165015,35
chr16:83989012-83990322	chr16	+	83989105	83990339	True	NM_013370,NM_001080442,NM_182981,NM_182980	chr16,chr16,chr16,chr16	+,-,+,+	OSGIN1,SLC38A8,OSGIN1,OSGIN1	-6484,85473,-2329,-6484
chr1:111024304-111024948	chr1	+	111024369	111024931	True	NM_005549,NR_003599	chr1,chr1	-,+	KCNA10,CYMP	36916,-1032
chrX:108780759-108781118	chrX	+	108780812	108781162	True	NM_018698,NM_001522	chrX,chrX	+,-	NXT2,GUCY2F	-1857,-55527
chr20:37596872-37597845	chr20	+	37596999	37597885	True	NM_001190809,NR_033905,NR_027124,NM_021931	chr20,chr20,chr20,chr20	+,+,-,+	DHX35,DHX35,LOC339568,DHX35	-6076,-6076,255556,-6076
chr12:20551850-20553511	chr12	+	20551865	20553243	True	NM_000921,NM_021094	chr12,chr12	+,-	PDE3A,SLCO1A2	-29725,934639
chr3:36940638-36941629	chr3	+	36940716	36941247	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	45358,93593
chr10:17851070-17851503	chr10	+	17851182	17851536	True	NM_002438,NM_014241,NM_001009567	chr10,chr10,chr10	+,-,+	MRC1,PTPLA,MRC1L1	15,-191809,15
chr10:17851070-17851503	chr10	+	18098172	18098526	False	NM_002438,NM_014241,NM_001009567	chr10,chr10,chr10	+,-,+	MRC1,PTPLA,MRC1L1	15,-438799,15
chr9:74384078-74384399	chr9	+	74384102	74384430	True	NM_001135820,NM_013390,NM_182505	chr9,chr9,chr9	-,-,+	TMEM2,TMEM2,C9orf85	-302,-302,141992
chrX:150869315-150869708	chrX	+	150869457	150869670	True	NR_029973,NR_033262,NM_024082	chrX,chrX,chrX	-,+,+	MIR452,PRRG3,PRRG3	258564,-2729,-5778
chr18:3409455-3410047	chr18	+	3409617	3410077	True	NM_019856,NM_174886	chr18,chr18	-,+	MYOM1,TGIF1	-189511,1994
chr20:58302262-58303451	chr20	+	58302352	58303472	True	NM_014258,NM_183246,NM_183244	chr20,chr20,chr20	-,+,+	SYCP2,PHACTR3,PHACTR3	203789,-6138,-6138
chr22:29704944-29705651	chr22	+	29704986	29705450	True	NM_006478,NM_152236,NM_152237,NM_001007279,NM_006477	chr22,chr22,chr22,chr22,chr22	+,+,+,-,-	GAS2L1,GAS2L1,GAS2L1,RASL10A,RASL10A	-2040,-2040,-2040,6348,6348
chr7:116168276-116169041	chr7	+	116168299	116168737	True	NR_002330,NM_001753,NM_001172896,NM_001172897,NM_001172895	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	ST7OT1,CAV1,CAV1,CAV1,CAV1	425701,-3511,-2003,-1938,-3287
chr17:10743348-10745034	chr17	+	10743417	10744780	True	NM_020233,NM_001101387	chr17,chr17	+,-	C17orf48,PIRT	-142541,-1999
chr2:207578443-207579017	chr2	+	207578446	207578904	True	NM_001093730,NM_001136193	chr2,chr2	-,+	DYTN,FASTKD2	4274,51207
chr2:30459858-30461676	chr2	+	30460088	30461692	True	NM_004304,NM_030915	chr2,chr2	-,+	ALK,LBH	-315611,-5744
chr11:17188995-17189982	chr11	+	17189191	17189800	True	NM_002645,NM_005013	chr11,chr11	-,+	PIK3C2A,NUCB2	1617,108485
chr3:152093579-152093881	chr3	+	152093847	152093934	True	NM_207297,NM_001123228	chr3,chr3	+,-	MBNL1,TMEM14E	-76714,-35068
chr10:27442935-27443141	chr10	+	27442958	27443182	True	NM_032844,NM_014263,NM_001172304,NM_001172303,NM_139312	chr10,chr10,chr10,chr10,chr10	+,-,+,+,-	MASTL,YME1L1,MASTL,MASTL,YME1L1	570,189,570,570,189
chr19:39109274-39109516	chr19	+	39109394	39109478	True	NM_013234,NM_007181,NM_001042600	chr19,chr19,chr19	+,-,-	EIF3K,MAP4K1,MAP4K1	243,-751,-751
chr4:49177906-49179134	chr4	+	49178028	49179047	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-189818,-269213
chr4:49177906-49179134	chr4	-	49622255	49622305	False	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-634041,-713440
chr7:62765327-62765631	chr7	+	62765376	62765560	True	NR_028348,NR_003952	chr7,chr7	+,-	LOC100287704,LOC643955	43887,-942
chr7:62765327-62765631	chr7	+	57201039	57201090	False	NM_033273,NR_036102	chr7,chr7	-,+	ZNF479,MIR3147	6532,271640
chr7:62765327-62765631	chr7	-	62903385	62903569	False	NR_028349	chr7	-	LOC100287834	-43966
chr3:180040043-180040724	chr3	+	180040469	180040587	True	NM_001042601,NM_016559	chr3,chr3	+,-	TTC14,PEX5L	279330,-285952
chr17:26878845-26879289	chr17	+	26878850	26879169	True	NM_054035,NM_005148,NM_003593	chr17,chr17,chr17	-,-,+	UNC119,UNC119,FOXN1	527,527,-27942
chr2:29346591-29348075	chr2	+	29346691	29347971	True	NM_001029883,NM_024692	chr2,chr2	-,+	C2orf71,CLIP4	-49564,-8434
chr19:18653710-18653940	chr19	+	18653822	18653890	True	NM_012181,NM_001171948	chr19,chr19	-,+	FKBP8,C19orf50	543,14681
chr6:17599641-17600201	chr6	+	17599670	17600181	True	NM_005124,NM_016255	chr6,chr6	-,+	NUP153,FAM8A1	106688,336
chr10:104223221-104224268	chr10	+	104223318	104223946	True	NM_024789,NM_024886	chr10,chr10	+,-	TMEM180,C10orf95	-2199,-12018
chr16:54966934-54967141	chr16	+	54966992	54967128	True	NM_005853,NR_034105,NR_034106	chr16,chr16,chr16	+,-,-	IRX5,CRNDE,CRNDE	-1932,-3913,-4302
chr17:39017395-39017631	chr17	+	39017484	39017680	True	NM_000223,NM_001195386	chr17,chr17	-,+	KRT12,TMEM99	5832,-42109
chr17:46689102-46689453	chr17	+	46689112	46689382	True	NM_004502,NM_024016,NM_018952,NR_033205	chr17,chr17,chr17,chr17	-,-,-,+	HOXB7,HOXB8,HOXB6,LOC404266	-729,2969,-6778,-15843
chr11:31832712-31832919	chr11	+	31832743	31832901	True	NM_001127612,NM_000280,NM_001604,NR_033971	chr11,chr11,chr11,chr11	-,-,-,+	PAX6,PAX6,PAX6,DKFZp686K1684	6658,28,28,5212
chrX:103499093-103499594	chrX	+	103499143	103499551	True	NM_153448,NM_207318	chrX,chrX	-,+	ESX1,FAM199X	98,-87893
chr11:120112336-120113353	chr11	+	120112389	120113239	True	NM_014352,NM_012101	chr11,chr11	+,-	POU2F3,TRIM29	-1489,-103526
chr16:28890791-28891194	chr16	+	28890853	28891167	True	NM_003321,NM_173201,NM_004320	chr16,chr16,chr16	-,+,+	TUFM,ATP2A1,ATP2A1	-33124,-1095,-1095
chr21:31312103-31312331	chr21	+	31312138	31312358	True	NM_175611,NR_027021,NM_000830	chr21,chr21,chr21	-,+,-	GRIK1,GRIK1-AS1,GRIK1	-14,-191695,-14
chr16:735690-736056	chr16	+	735733	735933	True	NM_032259,NM_005861,NM_003961,NM_001005920	chr16,chr16,chr16,chr16	-,+,+,-	WDR24,STUB1,RHBDL1,JMJD8	4517,-5669,-9709,-1294
chr22:51040010-51040428	chr22	+	51040226	51040394	True	NM_016431,NM_012324,NM_005198	chr22,chr22,chr22	+,+,-	MAPK8IP2,MAPK8IP2,CHKB	1167,-1146,-18798
chr5:132010738-132011199	chr5	+	132010859	132011231	True	NM_007054,NM_172348,NM_000589	chr5,chr5,chr5	-,+,+	KIF3A,IL4,IL4	62084,-1539,-1539
chr1:167054978-167055587	chr1	+	167054991	167055437	True	NM_005814,NM_001080426	chr1,chr1	-,+	GPA33,DUSP27	4481,8649
chrX:54210532-54211029	chrX	+	54210718	54210941	True	NM_198456,NM_058163,NM_017848	chrX,chrX,chrX	-,+,-	FAM120C,TSR2,FAM120C	-1004,255911,-1004
chr1:6613137-6613756	chr1	+	6613258	6613585	True	NM_177540,NM_024654,NM_138697	chr1,chr1,chr1	+,-,+	TAS1R1,NOL9,TAS1R1	1752,1128,1752
chr17:3866719-3867072	chr17	+	3866723	3867029	True	NM_174958,NM_144611,NM_174953,NM_174955,NM_174954,NM_174957,NM_174956,NM_005173	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,-,-,-,-,-,-	ATP2A3,CYB5D2,ATP2A3,ATP2A3,ATP2A3,ATP2A3,ATP2A3,ATP2A3	757,179432,757,757,757,757,757,757
chr1:212459526-212459974	chr1	+	212459549	212460007	True	NM_006243,NM_001198862	chr1,chr1	+,-	PPP2R5A,TMEM206	-721,128286
chr21:37948923-37949167	chr21	+	37948996	37949208	True	NM_001146077,NM_009586	chr21,chr21	-,+	CLDN14,SIM2	-129,122782
chr17:33568574-33568825	chr17	+	33568663	33568817	True	NM_152462,NM_144975	chr17,chr17	-,+	AMAC1,SLFN5	-47251,1268
chr14:37645387-37646964	chr14	+	37645386	37646736	True	NM_001171170,NM_030631,NR_033240	chr14,chr14,chr14	-,-,+	SLC25A21,SLC25A21,LOC100129794	-3521,-3521,-4211
chr4:818370-818991	chr4	+	818445	818893	True	NM_032326,NM_006651	chr4,chr4	+,-	TMEM175,CPLX1	107368,1102
chr14:94941018-94941612	chr14	+	94941198	94941652	True	NM_006215,NM_001042518,NM_175739	chr14,chr14,chr14	+,-,-	SERPINA4,SERPINA9,SERPINA9	86130,1068,1068
chr1:84790646-84791628	chr1	+	84790702	84791474	True	NM_001134664,NR_003927	chr1,chr1	+,-	SAMD13,UOX	-22428,72152
chr5:158524647-158524856	chr5	+	158524753	158524826	True	NM_024007,NM_145049	chr5,chr5	-,+	EBF1,UBLCP1	2013,165262
chr16:46919563-46919859	chr16	+	46919568	46919894	True	NM_133443,NM_001142466,NM_001001436	chr16,chr16,chr16	+,+,-	GPT2,GPT2,C16orf87	-1311,-517,-54494
chr1:6264754-6265129	chr1	+	6264887	6265093	True	NM_000983,NM_207396	chr1,chr1	-,+	RPL22,RNF207	-5208,1095
chr3:32856757-32857776	chr3	+	32856905	32857806	True	NM_016141,NM_001039111	chr3,chr3	-,+	DYNC1LI1,TRIM71	-244539,1703
chr16:81527209-81527425	chr16	+	81527214	81527372	True	NM_001076780,NM_030629	chr16,chr16	-,+	PKD1L2,CMIP	-273239,1581
chr3:10549391-10549688	chr3	+	10549391	10549709	True	NM_001683,NR_024146,NM_001001331	chr3,chr3,chr3	-,+,-	ATP2B2,GHRLOS,ATP2B2	-2123,-222009,-2123
chr2:162035899-162036220	chr2	+	162036121	162036245	True	NM_016836,NM_001199135	chr2,chr2	-,+	RBMS1,TANK	-685803,-19233
chr2:220039769-220040311	chr2	+	220039837	220040338	True	NM_024293,NM_015680,NM_001144890,NM_144712,NM_001144889	chr2,chr2,chr2,chr2,chr2	+,-,-,-,-	FAM134A,CNPPD1,SLC23A3,SLC23A3,SLC23A3	2600,1414,-5020,-5020,-5020
chr20:36148753-36148992	chr20	+	36148907	36149025	True	NM_005386,NM_001167821,NM_001167820,NM_001167823,NM_001167822,NM_006698,NM_181689	chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,-,-,-,-,-,+	NNAT,BLCAP,BLCAP,BLCAP,BLCAP,BLCAP,NNAT	581,7159,7358,3978,7108,7358,581
chr6:74160635-74161009	chr6	+	74160891	74161006	True	NM_001123226,NM_138441	chr6,chr6	+,-	MTO1,MB21D1	10447,1094
chr19:4558121-4558435	chr19	+	4558120	4558406	True	NM_152362,NM_032108	chr19,chr19	+,-	TNFAIP8L1,SEMA6B	81120,1415
chr2:68547653-68548571	chr2	+	68547724	68548533	True	NM_015463,NM_002664,NM_001111101	chr2,chr2,chr2	-,+,-	CNRIP1,PLEK,CNRIP1	-541,43788,-541
chr2:152578938-152579936	chr2	+	152578947	152579903	True	NM_001164507,NM_001177665	chr2,chr2	-,+	NEB,RIF1	11148,-312401
chr7:7702305-7703392	chr7	+	7702695	7703328	True	NR_034084,NM_002947	chr7,chr7	+,-	LOC729852,RPA3	-22416,54968
chr5:148787250-148787827	chr5	+	148787298	148787858	True	NR_027180,NM_014443	chr5,chr5	+,-	LOC728264,IL17B	-909,-28460
chr14:21737500-21737892	chr14	+	21737663	21737875	True	NM_001077443,NM_001077442,NM_020366,NM_004500,NM_031314	chr14,chr14,chr14,chr14,chr14	-,-,+,-,-	HNRNPC,HNRNPC,RPGRIP1,HNRNPC,HNRNPC	-25,-25,18260,-25,-25
chr22:42320677-42321359	chr22	+	42321115	42321407	True	NR_029507,NM_052945	chr22,chr22	+,-	MIR33A,TNFRSF13C	-24218,1464
chr10:96162171-96162379	chr10	+	96162170	96162340	True	NM_022451,NM_015188	chr10,chr10	-,+	NOC3L,TBC1D12	-39487,-35
chr1:156085380-156085758	chr1	+	156085438	156085774	True	NM_001093725,NM_005572,NM_170707,NM_170708	chr1,chr1,chr1,chr1	-,+,+,+	MEX3A,LMNA,LMNA,LMNA	-33649,-1028,-1028,-1028
chr5:767082-767438	chr5	+	767235	767407	True	NM_001166260,NM_007030	chr5,chr5	+,-	TRIP13,TPPP	125561,-73725
chr1:226023383-226023661	chr1	+	226023549	226023655	True	NM_000120,NM_014698	chr1,chr1	+,-	EPHX1,TMEM63A	-10598,46815
chr6:126347824-126348039	chr6	+	126347868	126347940	True	NM_016063,NM_001031712	chr6,chr6	-,+	HDDC2,TRMT11	-724586,-40347
chr1:47183705-47184110	chr1	+	47183719	47184157	True	NM_014774,NM_001145474	chr1,chr1	-,+	KIAA0494,C1orf223	629,-46273
chr17:30816629-30817127	chr17	+	30816670	30817029	True	NM_003885,NM_022344	chr17,chr17	+,-	CDK5R1,C17orf75	-2616,-147481
chr8:102504806-102505035	chr8	+	102504862	102505033	True	NM_016096,NM_024915	chr8,chr8	-,+	ZNF706,GRHL2	-286902,-245
chr1:114506557-114508524	chr1	+	114506696	114508516	True	NM_181358,NM_006594	chr1,chr1	+,-	HIPK1,AP4B1	-10255,-58955
chr14:75746648-75746887	chr14	+	75746748	75746868	True	NM_006827,NM_005252	chr14,chr14	-,+	TMED10,FOS	-103399,-1318
chr7:66769038-66769538	chr7	+	66769307	66769422	True	NM_022906,NR_022007	chr7,chr7	+,-	STAG3L4,PMS2P4	-1754,-1901
chr7:66769038-66769538	chr7	+	99782509	99782565	False	NM_152742,NM_012447	chr7,chr7	-,+	GPC2,STAG3	-7519,-7028
chr5:38539344-38540447	chr5	+	38539357	38540425	True	NM_001127671,NM_182801	chr5,chr5	-,+	LIFR,EGFLAM	16382,-93772
chr1:47609750-47610364	chr1	+	47609809	47610287	True	NM_005764,NM_001010969	chr1,chr1	-,+	PDZK1IP1,CYP4A22	45534,-6753
chr1:47609750-47610364	chr1	-	47399972	47400252	False	NM_000778,NM_178033	chr1,chr1	-,+	CYP4A11,CYP4X1	6954,88987
chr16:67466185-67466400	chr16	+	67466217	67466313	True	NM_013304,NM_000196	chr16,chr16	-,+	ZDHHC1,HSD11B2	-15878,-1232
chr3:101235874-101237437	chr3	+	101236231	101237461	True	NM_001077203,NM_020654,NR_036433	chr3,chr3,chr3	-,-,+	SENP7,SENP7,FAM172B	-4146,-4146,254
chr10:68687884-68688447	chr10	+	68687925	68688385	True	NM_001127384,NM_178011	chr10,chr10	-,+	CTNNA3,LRRTM3	737089,-2184
chr19:45456175-45456520	chr19	+	45456355	45456462	True	NM_001199468,NM_001294,NM_000483,NM_145288	chr19,chr19,chr19,chr19	+,+,+,-	CLPTM1,CLPTM1,APOC2,ZNF296	2136,2136,-7175,123287
chr7:120966933-120968897	chr7	+	120966983	120968810	True	NM_057168,NM_016087,NM_001040020	chr7,chr7,chr7	+,+,-	WNT16,WNT16,FAM3C	279,-1621,67662
chr1:20440627-20440861	chr1	+	20440643	20440893	True	NM_022819,NM_012400	chr1,chr1	+,-	PLA2G2F,PLA2G2D	24929,5165
chr15:28568905-28569813	chr15	+	28569194	28569404	True	NM_004667,NR_033351	chr15,chr15	-,+	HERC2,GOLGA8F	-1899,54379
chr15:28568905-28569813	chr15	-	28832510	28832720	False	NR_036443,NR_033351	chr15,chr15	+,-	HERC2P9,GOLGA8F	66867,-54367
chr15:28568905-28569813	chr15	+	20713322	20713532	False	NR_036432,NR_027411	chr15,chr15	-,+	HERC2P3,GOLGA8C	-1889,54141
chr15:28568905-28569813	chr15	+	23380114	23380324	False	NR_002824,NR_036470	chr15,chr15	-,+	HERC2P2,HERC2P7	-1855,10397
chr3:153838618-153838928	chr3	+	153838646	153838870	True	NR_037901,NM_015595	chr3,chr3	-,+	LOC100507524,ARHGEF26	179,278
chr15:101794402-101794889	chr15	+	101794430	101794924	True	NM_014918,NM_024652	chr15,chr15	-,+	CHSY1,LRRK1	-2293,-335021
chr17:3705763-3706489	chr17	+	3705828	3706530	True	NM_031965,NM_002208	chr17,chr17	+,-	GSG2,ITGAE	-78682,-1291
chr16:66598666-66599841	chr16	+	66598720	66599884	True	NM_181270,NM_181271,NM_181272,NM_181283,NM_181268,NM_181296,NM_004614,NM_181269,NM_052999	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,+,-,+,+	CMTM1,CMTM1,CMTM1,CMTM1,CMTM1,CMTM1,TK2,CMTM1,CMTM1	409,409,409,409,465,409,-14405,409,465
chr8:81177867-81178126	chr8	+	81178008	81178074	True	NM_005079,NM_001105539	chr8,chr8	-,+	TPD52,ZBTB10	-94172,220373
chrX:45051006-45051690	chrX	+	45051112	45051650	True	NM_024689,NM_176819,NM_021140	chrX,chrX,chrX	-,-,+	CXorf36,CXorf36,KDM6A	8546,8546,-318742
chr10:98120266-98121384	chr10	+	98120437	98121257	True	NM_033207,NM_001040102,NM_001040103,NM_004088	chr10,chr10,chr10,chr10	-,-,-,+	OPALIN,OPALIN,OPALIN,DNTT	-1345,-1345,-1345,-56403
chr7:65961965-65962784	chr7	+	65962100	65962621	True	NM_001167961,NR_002933	chr7,chr7	+,-	KCTD7,LOC493754	131246,80928
chr8:124054720-124055379	chr8	+	124054738	124055182	True	NM_001145088,NM_001134671,NM_024295	chr8,chr8,chr8	+,-,-	WDR67,DERL1,DERL1	29737,-90,-90
chr20:3750212-3750519	chr20	+	3750418	3750512	True	NM_001039140,NM_004358	chr20,chr20	-,+	C20orf27,CDC25B	-1966,25888
chrX:44701324-44702228	chrX	+	44701708	44702065	True	NM_022076,NM_173794	chrX,chrX	+,-	DUSP21,FUNDC1	1183,-299487
chr5:82766643-82766882	chr5	+	82766642	82766892	True	NM_001126336,NM_004385,NM_001164097,NM_001884,NM_001164098	chr5,chr5,chr5,chr5,chr5	+,+,+,-,+	VCAN,VCAN,VCAN,HAPLN1,VCAN	600,600,600,250054,600
chr19:12722316-12723146	chr19	+	12722338	12723188	True	NM_153358,NM_020714	chr19,chr19	+,-	ZNF791,ZNF490	-657,-715
chr22:18121973-18123410	chr22	+	18122028	18123219	True	NM_001696,NM_015367	chr22,chr22	-,+	ATP6V1E1,BCL2L13	-10440,-600
chr18:56702323-56703562	chr18	+	56702517	56703525	True	NR_024021,NM_013435	chr18,chr18	+,-	LOC390858,RAX	-79,237150
chr9:17140529-17142153	chr9	+	17141126	17142166	True	NM_017637,NM_001114395,NM_017738	chr9,chr9,chr9	-,+,+	BNC2,CNTLN,CNTLN	-270340,-6139,-6139
chr1:46901425-46902386	chr1	+	46901944	46902418	True	NM_001097611,NM_001441	chr1,chr1	-,+	KNCN,FAAH	114519,-42056
chr8:48872161-48872460	chr8	+	48872406	48872472	True	NM_001081640,NM_182746,NM_006904,NM_005914	chr8,chr8,chr8,chr8	-,+,-,+	PRKDC,MCM4,PRKDC,MCM4	321,290,321,290
chr13:27846563-27847294	chr13	+	27846586	27847274	True	NM_182488,NM_206827	chr13,chr13	-,+	USP12,RASL11A	-100553,-2173
chr12:10531607-10532044	chr12	+	10531842	10532085	True	NM_007360,NM_007334	chr12,chr12	-,+	KLRK1,KLRD1	10621,-71483
chr19:17903241-17903627	chr19	+	17903455	17903669	True	NM_014256,NM_005543	chr19,chr19	+,-	B3GNT3,INSL3	2249,28701
chr5:55523508-55524545	chr5	+	55523622	55524150	True	NM_024669,NM_139017	chr5,chr5	-,+	ANKRD55,IL31RA	5086,-376346
chr8:142376263-142377155	chr8	+	142376403	142377099	True	NR_024441,NM_005293	chr8,chr8	+,-	LOC731779,GPR20	-25806,316
chr3:112938055-112939739	chr3	+	112938417	112939766	True	NR_027796,NM_033254	chr3,chr3	-,+	C3orf17,BOC	-199862,-7094
chr1:154198197-154199457	chr1	+	154198237	154199256	True	NM_001098616,NM_015449,NM_138740,NM_001127320,NM_014847	chr1,chr1,chr1,chr1,chr1	-,-,-,+,+	C1orf43,C1orf43,C1orf43,UBAP2L,UBAP2L	-4964,-4964,-4964,-5639,-4969
chr5:34681758-34682119	chr5	+	34681874	34681954	True	NM_001145521,NM_001145523,NM_001145525,NR_026591	chr5,chr5,chr5,chr5	+,+,+,-	RAI14,RAI14,RAI14,RAD1	2657,5709,2657,233833
chr8:120856309-120857416	chr8	+	120856309	120857236	True	NM_024094,NM_003184,NM_022783	chr8,chr8,chr8	-,-,+	DSCC1,TAF2,DEPTOR	10984,-11235,28663
chr17:8022232-8022474	chr17	+	8022312	8022482	True	NM_001165967,NR_036201,NM_021628,NM_001165960,NM_032580	chr17,chr17,chr17,chr17,chr17	-,+,-,-,-	HES7,MIR4314,ALOXE3,ALOXE3,HES7	4978,-30989,-452,-78,4978
chr3:53914451-53915235	chr3	+	53914459	53915249	True	NM_022899,NM_018725	chr3,chr3	-,+	ACTR8,IL17RB	1030,-33933
chr11:64779873-64780334	chr11	+	64779919	64780382	True	NM_001199745,NR_037650,NM_001667,NM_138456	chr11,chr11,chr11,chr11	+,+,+,-	ARL2,ARL2-SNX15,ARL2,BATF2	1202,1202,1202,-15402
chr10:27228412-27230339	chr10	+	27228432	27230308	True	NR_026795,NM_001172303	chr10,chr10	-,+	NCRNA00202,MASTL	672,213444
chr9:5433179-5433449	chr9	+	5433263	5433397	True	NM_014143,NM_018465	chr9,chr9	+,-	CD274,C9orf46	17105,4513
chr4:128552748-128553915	chr4	+	128553245	128553947	True	NM_152778,NM_015693	chr4,chr4	-,+	MFSD8,INTU	333242,139
chr17:34197767-34198471	chr17	+	34197820	34198521	True	NM_152781,NM_003487,NM_002985	chr17,chr17,chr17	-,+,-	C17orf66,TAF15,CCL5	-1925,-61385,8907
chr1:42843490-42843933	chr1	+	42843742	42843989	True	NM_001198850,NM_173642	chr1,chr1	-,+	FOXJ3,RIMKLA	-42194,2478
chr1:12077265-12077558	chr1	+	12077281	12077433	True	NM_021933,NM_138346	chr1,chr1	+,-	MIIP,KIAA2013	2078,-90796
chr19:7911562-7912100	chr19	+	7911670	7911830	True	NM_001159944,NM_001190467	chr19,chr19	+,-	EVI5L,FLJ22184	-335,27546
chr7:20825837-20826137	chr7	+	20825959	20826033	True	NM_182700,NR_026673,NM_198956	chr7,chr7,chr7	-,+,-	SP8,RPL23P8,SP8	525,40883,525
chr11:34533292-34534291	chr11	+	34533428	34534319	True	NM_001422,NM_001752,NM_198381	chr11,chr11,chr11	-,+,-	ELF5,CAT,ELF5	1065,-73007,-82
chr22:30163065-30164436	chr22	+	30163280	30164382	True	NM_001003692,NM_013387,NM_001003684,NM_019103	chr22,chr22,chr22,chr22	-,+,+,-	ZMAT5,UQCR10,UQCR10,ZMAT5	-311,27,27,-311
chr2:175253048-175253554	chr2	+	175253290	175253429	True	NM_024583,NM_004882,NM_001193528	chr2,chr2,chr2	+,-,+	SCRN3,CIR1,SCRN3	7027,7073,7027
chr4:109684605-109685048	chr4	+	109684606	109684944	True	NM_001146627,NR_027474,NR_027475,NM_021227,NM_001146590,NM_031279	chr4,chr4,chr4,chr4,chr4,chr4	-,-,-,+,-,-	AGXT2L1,AGXT2L1,AGXT2L1,OSTC,AGXT2L1,AGXT2L1	-371,-371,-371,-112916,-371,-371
chr6:136866001-136867725	chr6	+	136866194	136867727	True	NM_000288,NM_001198616,NM_001198617,NM_003980	chr6,chr6,chr6,chr6	+,-,-,-	PEX7,MAP7,MAP7,MAP7	275974,4280,4280,4280
chr4:154604768-154605319	chr4	+	154604810	154605124	True	NM_173662,NM_003264	chr4,chr4	-,+	RNF175,TLR2	76313,316
chr1:14747441-14748333	chr1	+	14747575	14748311	True	NM_015209,NR_027136	chr1,chr1	+,-	KAZN,C1orf126	176901,730699
chr6:168720056-168720288	chr6	+	168720058	168720288	True	NM_214462,NM_001166412	chr6,chr6	-,+	DACT2,SMOC2	164,121542
chr2:85842302-85842575	chr2	+	85842507	85842621	True	NM_006590,NM_001013649	chr2,chr2	+,-	USP39,C2orf68	661,-3328
chr19:53631871-53632119	chr19	+	53631937	53632091	True	NM_001164309,NR_028343,NM_001191055,NM_018355,NM_001136038	chr19,chr19,chr19,chr19,chr19	-,-,+,-,-	ZNF415,ZNF415,HERV-V2,ZNF415,ZNF415	4130,4132,-83997,4104,4130
chr19:53631871-53632119	chr19	+	53602129	53602202	False	NM_001191055,NM_033288,NM_001102603,NM_198893	chr19,chr19,chr19,chr19	+,-,-,-	HERV-V2,ZNF160,ZNF160,ZNF160	-54189,4542,4542,4542
chr1:40915341-40915645	chr1	+	40915341	40915543	True	NM_023070,NM_001852	chr1,chr1	+,-	ZNF643,COL9A2	793,-132402
chr3:17784445-17785310	chr3	+	17784485	17785324	True	NM_014744,NM_001134380,NR_037465	chr3,chr3,chr3	-,-,+	TBC1D5,TBC1D5,MIR3714	-2086,-245,-809848
chrX:133592131-133593469	chrX	+	133592266	133593160	True	NM_000194,NR_030587	chrX,chrX	+,-	HPRT1,MIR450B	1014,81184
chr12:50450880-50451216	chr12	+	50450908	50451216	True	NM_020039,NM_001095,NM_013277	chr12,chr12,chr12	+,+,-	ACCN2,ACCN2,RACGAP1	270,270,-31601
chr11:15094258-15094991	chr11	+	15094419	15095040	True	NM_001741,NM_000728	chr11,chr11	-,+	CALCA,CALCB	-100587,105
chr16:57022650-57022986	chr16	+	57022683	57023003	True	NM_024946,NM_032206	chr16,chr16	-,+	FAM192A,NLRC5	197023,406
chr20:5894901-5896822	chr20	+	5894994	5896748	True	NM_001819,NM_015939	chr20,chr20	+,-	CHGB,TRMT6	-3078,34475
chr8:90711830-90712744	chr8	+	90712522	90712665	True	NM_002485,NM_003821	chr8,chr8	-,+	NBN,RIPK2	284285,57309
chr6:7309549-7310864	chr6	+	7310133	7310749	True	NM_031480,NM_003144	chr6,chr6	+,-	RIOK1,SSR1	79312,2853
chr14:75899820-75901394	chr14	+	75900106	75901407	True	NM_130469,NM_001135049,NM_001135048,NM_007176,NM_001135047	chr14,chr14,chr14,chr14,chr14	+,+,+,-,+	JDP2,JDP2,JDP2,C14orf1,JDP2	-5105,-1328,-5245,226181,-5656
chr20:25039199-25039455	chr20	+	25039221	25039443	True	NM_003650,NM_032501	chr20,chr20	+,-	CST7,ACSS1	-109406,223
chrX:75393000-75393376	chrX	+	75393134	75393424	True	NM_016500,NM_138703	chrX,chrX	+,-	CXorf26,MAGEE2	-414,-388055
chr4:79862467-79863651	chr4	+	79862490	79863457	True	NM_198892,NM_001040202	chr4,chr4	+,-	BMP2K,PAQR3	-165009,-1908
chr12:95630003-95630521	chr12	+	95630286	95630354	True	NM_017599,NM_018351	chr12,chr12	+,-	VEZT,FGD6	-18815,-19046
chr6:31323896-31324174	chr6	+	31323934	31323994	True	NM_005514,NR_036523	chr6,chr6	-,+	HLA-B,MICA	1045,43566
chr11:60608289-60609194	chr11	+	60608351	60609139	True	NM_004778,NM_024098	chr11,chr11	-,+	GPR44,CCDC86	14355,289
chr19:46709767-46711224	chr19	+	46709835	46711130	True	NR_027003,NM_207393	chr19,chr19	+,-	DKFZp434J0226,IGFL3	2368,-81904
chr19:29398622-29399258	chr19	+	29398656	29399121	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	56916,305066
chr3:169626911-169627160	chr3	+	169626930	169627196	True	NM_024727,NM_182610	chr3,chr3	-,+	LRRC31,SAMD7	-39270,2285
chr17:32485048-32485884	chr17	+	32485050	32485832	True	NM_002982,NM_001094	chr17,chr17	+,-	CCL2,ACCN1	96463,-1225
chr21:48054553-48055451	chr21	+	48054612	48055474	True	NM_006272,NM_001535	chr21,chr21	-,+	S100B,PRMT2	-29577,52
chr12:57633384-57633737	chr12	+	57633427	57633643	True	NM_020142,NR_029415,NR_029416,NM_001166358,NM_001166359,NM_001166357	chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,+,+,+	NDUFA4L2,SHMT2,SHMT2,SHMT2,SHMT2,SHMT2	882,-9367,-9650,-9650,-9367,-9335
chr6:90601362-90602906	chr6	+	90601478	90602384	True	NM_014611,NM_032602	chr6,chr6	-,+	MDN1,GJA10	-72036,1803
chr12:50795535-50795884	chr12	+	50795592	50795832	True	NR_033200,NM_052879,NM_001145475,NM_199190,NM_001170804,NM_001170803,NM_199188,NM_001170808	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,-,+,+,+,+,+	LARP4,LARP4,FAM186A,LARP4,LARP4,LARP4,LARP4,LARP4	-1058,-1058,-5187,-1058,-1058,-1058,-1058,-1058
chr9:123635061-123636872	chr9	+	123635386	123636870	True	NM_015651,NR_024408,NM_001009936	chr9,chr9,chr9	-,+,-	PHF19,LOC253039,PHF19	2786,-30117,2786
chr2:231727883-231728536	chr2	+	231727991	231728537	True	NM_001012516,NM_030926,NM_001012514,NM_005683	chr2,chr2,chr2,chr2	+,+,+,-	ITM2C,ITM2C,ITM2C,GPR55	1083,1083,1083,61454
chr13:20537271-20538238	chr13	+	20537291	20538248	True	NM_001039650,NM_197968,NM_003453,NM_001190964,NM_001190965	chr13,chr13,chr13,chr13,chr13	-,+,+,+,+	ZMYM5,ZMYM2,ZMYM2,ZMYM2,ZMYM2	-99515,-4543,-4543,-4505,-4379
chr19:17581612-17581949	chr19	+	17581720	17581798	True	NM_198580,NM_138454	chr19,chr19	+,-	SLC27A1,NXNL1	-471,-9995
chr10:64891637-64893061	chr10	+	64891700	64892914	True	NM_004241,NM_030759	chr10,chr10	-,+	JMJD1C,NRBF2	136118,92
chr2:113381244-113381681	chr2	+	113381412	113381688	True	NR_033871,NM_005415	chr2,chr2	-,+	FLJ42351,SLC20A1	20119,21745
chr11:62433288-62433666	chr11	+	62433295	62433521	True	NR_004390,NM_024099,NM_001085372,NM_001043229	chr11,chr11,chr11,chr11	+,-,+,+	SNORA57,C11orf48,C11orf83,METTL12	-452,5770,5604,-567
chr2:96676562-96677611	chr2	+	96676739	96677411	True	NM_207328,NR_003698	chr2,chr2	-,+	GPAT2,LOC729234	23366,-491
chr2:96676562-96677611	chr2	-	97759506	97760178	False	NM_199336,NM_001164315	chr2,chr2	-,+	FAHD2B,ANKRD36	454,19054
chr19:35597546-35598701	chr19	+	35597551	35598643	True	NM_001136012,NM_001136010,NM_001136011,NM_021910,NR_024562,NR_024561,NM_001136009,NM_001136008,NM_001136007,NM_005971	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,-,-,+,+,+,+	FXYD3,FXYD3,FXYD3,FXYD3,LOC100128675,LOC100128675,FXYD3,FXYD3,FXYD3,FXYD3	8088,8088,8088,8088,-343,-376,8088,8088,8088,8088
chr5:111066303-111067524	chr5	+	111066307	111067512	True	NM_001142483,NR_015370	chr5,chr5	-,+	C5orf13,NCRNA00219	24487,428710
chr19:1607291-1607515	chr19	+	1607387	1607552	True	NM_006830,NR_026557	chr19,chr19	-,+	UQCR11,PLK5P	-1904,-83373
chr6:26252101-26253487	chr6	+	26252233	26253508	True	NM_003547,NM_003524,NM_021018	chr6,chr6,chr6	-,+,-	HIST1H4G,HIST1H2BH,HIST1H3F	-5028,-405,-1398
chr2:175352254-175354246	chr2	+	175352284	175353973	True	NM_001033045,NM_152529,NM_024583	chr2,chr2,chr2	-,-,+	GPR155,GPR155,SCRN3	-473,-473,-91878
chr9:140770172-140770913	chr9	+	140770175	140770911	True	NM_032937,NM_000718	chr9,chr9	-,+	C9orf37,CACNA1B	-256867,1329
chr15:25441223-25441825	chr15	+	25441239	25441823	True	NR_003344,NR_003358,NR_003313,NR_003312,NR_003311,NR_003310,NM_130838,NR_003297,NR_003308,NR_003309,NR_003351,NR_003301,NR_003302,NR_003303,NR_003304,NR_003305,NR_003306,NR_003307	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,-,+,+,+,+,+,+,+,+,+,+,+	SNORD115-29,SNORD115-43,SNORD115-21,SNORD115-20,SNORD115-19,SNORD115-18,UBE3A,SNORD115-5,SNORD115-16,SNORD115-17,SNORD115-36,SNORD115-9,SNORD115-10,SNORD115-11,SNORD115-12,SNORD115-13,SNORD115-14,SNORD115-15	-6729,-6729,9585,9585,4646,4646,208880,-4724,2771,4646,-6729,-4727,-4727,-6729,-4727,-2822,-1222,9585
chr10:121303706-121304501	chr10	+	121303710	121304064	True	NM_001005339,NM_004281,NM_002925	chr10,chr10,chr10	-,+,-	RGS10,BAG3,RGS10	-1488,106817,-7665
chr9:131219371-131219582	chr9	+	131219464	131219540	True	NR_029837,NM_153439,NM_153440,NM_153437,NM_153436,NM_153433,NM_153432,NM_153435,NR_036757,NR_036756,NR_036755,NR_036754	chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,+,+,+,+,+,+,+,+,+,+,+	MIR219-2,ODF2,ODF2,ODF2,ODF2,ODF2,ODF2,ODF2,ODF2,ODF2,ODF2,ODF2	-64471,-1230,-836,-329,-2081,-836,-1230,-1230,-1230,-1230,-1230,-1230
chr13:100257824-100258233	chr13	+	100257836	100258175	True	NM_004951,NM_206808	chr13,chr13	-,+	GPR183,CLYBL	-298087,743
chr19:35646184-35646387	chr19	+	35646183	35646386	True	NM_001164605,NM_144779,NM_139284,NR_028406,NM_014164	chr19,chr19,chr19,chr19,chr19	+,+,-,+,+	FXYD5,FXYD5,LGI4,FXYD5,FXYD5	-389,-562,-20005,-562,-609
chr20:32813006-32813858	chr11	+	2355813	2355871	True	NM_139022,NR_024621	chr11,chr11	+,-	TSPAN32,C11orf21	-32629,-32670
chr1:110164032-110165935	chr1	+	110164154	110165854	True	NM_139156,NM_005272,NM_203404,NM_004037	chr1,chr1,chr1,chr1	+,-,+,+	AMPD2,GNAT2,AMPD2,AMPD2	-1746,-8449,2194,-929
chr17:56234633-56235294	chr17	+	56234642	56235292	True	NR_002307,NM_017777,NM_012374	chr17,chr17,chr17	+,-,+	MSX2P1,MKS1,OR4D1	-373,61424,-2178
chr9:114362052-114362271	chr9	+	114362080	114362250	True	NM_001015882,NM_012212,NM_001146109,NM_001146108	chr9,chr9,chr9,chr9	+,-,-,-	DNAJC25,PTGR1,PTGR1,PTGR1	31381,-369,-51,-51
chr10:104261979-104262251	chr10	+	104261983	104262213	True	NM_001178133,NM_005736,NM_016169	chr10,chr10,chr10	+,-,+	SUFU,ACTR1A,SUFU	1505,349,1505
chr8:38125863-38126104	chr8	+	38125903	38126131	True	NM_001164232,NM_001102560,NM_001102559,NM_032483	chr8,chr8,chr8,chr8	+,-,-,-	DDHD2,PPAPDC1B,PPAPDC1B,PPAPDC1B	-36483,657,657,657
chr11:65687713-65688010	chr11	+	65687805	65688041	True	NM_031450,NM_001135635,NM_006442	chr11,chr11,chr11	-,-,+	C11orf68,C11orf68,DRAP1	-1274,-1274,-1128
chr16:30205760-30205966	chr16	+	30205809	30205981	True	NM_177552,NR_037608,NR_037609,NM_001017390,NM_001014999,NM_001015000,NM_024044,NM_001031827,NR_002454,NM_001039182,NM_178044	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,+,+,-,+,-,+	SULT1A3,SLX1A-SULT1A3,SLX1B-SULT1A4,SULT1A4,SLX1A,SLX1A,SLX1B,BOLA2,LOC606724,BOLA2B,SLX1B	4567,-106,-106,4567,-696,-696,-696,-182,-5855,-182,-696
chr16:30205760-30205966	chr16	+	29466467	29466639	False	NM_177552,NR_037608,NR_037609,NM_001017390,NM_001014999,NM_001015000,NM_024044,NM_001031827,NR_002454,NM_001039182,NM_178044	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,+,+,-,+,-,+	SULT1A3,SLX1A-SULT1A3,SLX1B-SULT1A4,SULT1A4,SLX1A,SLX1A,SLX1B,BOLA2,LOC606724,BOLA2B,SLX1B	4567,-106,-106,4567,-696,-696,-696,-182,-5852,-182,-696
chr15:48512228-48513058	chr15	+	48512393	48513043	True	NM_016132,NM_001184832	chr15,chr15	-,+	MYEF2,SLC12A1	-41835,-13947
chr11:76744299-76746125	chr11	+	76744570	76745818	True	NM_182833,NM_138706	chr11,chr11	-,+	GDPD4,B3GNT6	252695,-42
chr18:14128146-14128894	chr18	+	14128428	14128919	True	NR_033354,NR_026756,NM_145287	chr18,chr18,chr18	-,+,-	ZNF519,LOC284233,ZNF519	3622,208502,3622
chr19:39936653-39937367	chr19	+	39936712	39937266	True	NM_001111020,NM_001130825,NM_003169,NM_001130824,NM_001020	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	SUPT5H,SUPT5H,SUPT5H,SUPT5H,RPS16	-578,-578,-476,-578,-10094
chr9:140657190-140657667	chr9	+	140657242	140657621	True	NM_032937,NR_024341	chr9,chr9	-,+	C9orf37,FLJ40292	-143934,1
chr15:25300445-25301439	chr15	+	25300527	25301455	True	NR_003317,NR_003316,NR_003320,NR_003321,NR_003324,NR_003322,NR_003319,NR_003318,NM_130838	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,-	SNORD116-2,SNORD116-1,SNORD116-5,SNORD116-6,SNORD116-9,SNORD116-7,SNORD116-4,SNORD116-3,UBE3A	-1222,-3955,6023,8716,550,6023,3228,550,349248
chr19:23938981-23940152	chr19	+	23939273	23940161	True	NM_138286,NR_003662	chr19,chr19	-,+	ZNF681,RPSAP58	1586,5654
chr19:1106141-1106626	chr19	+	1106220	1106654	True	NM_001039847,NM_002085,NM_002695,NM_001039848	chr19,chr19,chr19,chr19	+,+,-,+	GPX4,GPX4,POLR2E,GPX4	-2335,-2335,-10829,-1622
chr5:140256893-140257246	chr5	+	140256934	140257186	True	NM_031865,NM_031864,NM_031861,NM_002109,NM_018903,NM_018902,NM_018904	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,-,+,+,+	PCDHA13,PCDHA12,PCDHA11,HARS,PCDHA12,PCDHA11,PCDHA13	4667,-2054,-9154,-185963,-2054,-9154,4667
chr19:706469-706763	chr19	+	706486	706654	True	NM_214710,NM_002579,NM_001040134	chr19,chr19,chr19	-,+,+	PRSS57,PALM,PALM	-11025,2298,2298
chr3:178967812-178969445	chr3	+	178968258	178969456	True	NM_016331,NR_028135,NM_171829,NM_014407,NM_171830	chr3,chr3,chr3,chr3,chr3	+,-,-,-,-	ZNF639,KCNMB3,KCNMB3,KCNMB3,KCNMB3	72094,8273,8273,-3,239
chr15:94836781-94838476	chr15	+	94836986	94838523	True	NM_001159643,NM_018349,NR_034095	chr15,chr15,chr15	+,+,-	MCTP2,MCTP2,LOC400456	2906,2906,1031856
chr17:76185105-76185758	chr17	+	76185109	76185297	True	NM_001010982,NR_027083,NM_001145526,NM_003258	chr17,chr17,chr17,chr17	+,+,+,-	AFMID,AFMID,AFMID,TK1	-1762,-1762,-1762,-1824
chr1:161121703-161121995	chr1	+	161121839	161122000	True	NM_032998,NM_012475,NM_001014443,NM_016406	chr1,chr1,chr1,chr1	-,+,+,+	DEDD,USP21,USP21,UFC1	-19361,7253,7253,1533
chr7:73245176-73245482	chr7	+	73245190	73245450	True	NM_001305,NM_152559	chr7,chr7	+,-	CLDN4,WBSCR27	-48,11455
chr12:51718202-51718429	chr12	+	51718259	51718369	True	NM_001136269,NM_016293	chr12,chr12	+,-	DAZAP2,BIN2	-85802,-321
chr11:926505-926720	chr11	+	926536	926734	True	NM_001142675,NM_012305	chr11,chr11	-,+	CHID1,AP2A2	-11478,-746
chr4:21540396-21541323	chr4	+	21540395	21541247	True	NM_001035004,NM_145048	chr4,chr4	-,+	KCNIP4,PACRGL	5100,-838420
chr9:90342182-90343558	chr9	+	90342210	90343591	True	NM_001039803,NM_145918,NM_001912	chr9,chr9,chr9	-,+,+	CDK20,CTSL1,CTSL1	246154,-1296,-1296
chr5:140226050-140226572	chr5	+	140226250	140226491	True	NM_014005,NM_031860,NM_002109,NM_018911,NM_031859,NM_018901,NM_031857,NM_031856	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,-,+,+,+,+,+	PCDHA9,PCDHA10,HARS,PCDHA8,PCDHA10,PCDHA10,PCDHA9,PCDHA8	865,9142,-155279,-5403,9142,9142,865,-5403
chr2:206948301-206949233	chr2	+	206948375	206949207	True	NM_001037663,NM_017759	chr2,chr2	+,-	EEF1B2,INO80D	75110,1749
chr5:109034439-109035978	chr5	+	109034569	109035969	True	NM_014819,NM_002372	chr5,chr5	-,+	PJA2,MAN2A1	-288894,-9465
chr2:64236608-64238421	chr2	+	64236783	64238135	True	NM_006759,NM_016516,NM_001005739	chr2,chr2,chr2	+,-,-	UGP2,VPS54,VPS54	-167827,8130,8130
chr3:11266207-11267018	chr3	+	11266398	11267024	True	NM_001098211,NM_001128221	chr3,chr3	+,-	HRH1,VGLL4	644,343424
chr17:46983292-46983968	chr17	+	46983409	46983601	True	NM_023079,NM_007241	chr17,chr17	+,-	UBE2Z,SNF8	2129,38603
chr11:635469-635761	chr11	+	635592	635752	True	NM_000797,NM_021920	chr11,chr11	+,-	DRD4,SCT	1552,-8419
chrY:13308726-13309802	chrY	+	13309223	13309743	True	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	1464554,1223696
chr19:17445670-17445893	chr19	+	17445678	17445938	True	NM_133644,NM_020959,NM_001128855,NM_001195422,NM_032620	chr19,chr19,chr19,chr19,chr19	+,-,+,+,+	GTPBP3,ANO8,GTPBP3,GTPBP3,GTPBP3	2387,-40,2387,34,2387
chr12:112544355-112544612	chr12	+	112544361	112544473	True	NM_001143906,NM_024953	chr12,chr12	+,-	TRAFD1,NAA25	18875,2212
chr6:106538693-106539374	chr6	+	106538798	106539320	True	NM_182907,NM_004849,NM_001198	chr6,chr6,chr6	+,-,+	PRDM1,ATG5,PRDM1	7494,234437,-4662
chr2:214298985-214300598	chr2	+	214299089	214300651	True	NM_001079526,NM_024532	chr2,chr2	-,+	IKZF2,SPAG16	-282756,-150027
chr17:42221504-42222377	chr17	+	42221928	42222428	True	NM_001171251,NM_005474,NM_024032	chr17,chr17,chr17	+,-,+	C17orf53,HDAC5,C17orf53	-2705,-20914,-2705
chr19:54041661-54042450	chr19	+	54041677	54042465	True	NM_001079906,NR_002938	chr19,chr19	+,-	ZNF331,LOC284379	-395,64336
chr12:8817758-8818730	chr12	+	8818084	8818743	True	NM_003480,NM_020734	chr12,chr12	-,+	MFAP5,RIMKLB	-2651,31774
chr12:58163686-58164609	chr12	+	58163704	58164592	True	NM_206914,NM_023033,NM_005371,NM_015433,NM_000785	chr12,chr12,chr12,chr12,chr12	+,-,-,+,-	METTL21B,METTL1,METTL1,METTL21B,CYP27B1	1790,1372,1372,1790,-2728
chr1:155214666-155216064	chr1	+	155214668	155215975	True	NM_000157,NM_020897,NM_001171812,NM_001171811,NM_006589,NM_198264,NM_001005742,NM_001005741	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,+,-,-,-,-,-,-	GBA,HCN3,GBA,GBA,FAM189B,FAM189B,GBA,GBA	-3599,31398,-3602,-15,9349,9349,-15,-15
chr19:16296117-16296537	chr19	+	16296123	16296501	True	NM_014077,NM_054113	chr19,chr19	+,-	FAM32A,CIB3	-9,-11837
chr8:110373781-110374567	chr8	+	110373998	110374497	True	NM_177531,NM_032869	chr8,chr8	+,-	PKHD1L1,NUDCD1	208,-27648
chr22:30916497-30918216	chr22	+	30916534	30917626	True	NM_174977,NM_000355	chr22,chr22	-,+	SEC14L4,TCN2	-14836,85443
chr5:96449922-96450214	chr5	+	96450118	96450240	True	NM_153234,NM_175920	chr5,chr5	-,+	LIX1,LNPEP	28330,-156021
chr10:93169502-93169793	chr10	+	93169557	93169721	True	NM_182765,NM_173497,NR_024467	chr10,chr10,chr10	+,+,-	HECTD2,HECTD2,LOC100188947	374,374,201546
chr10:74650550-74651507	chr10	+	74650786	74651242	True	NM_152635,NM_032562	chr10,chr10	+,-	OIT3,PLA2G12B	2096,63318
chr5:175086619-175086979	chr5	+	175086768	175087007	True	NM_001131055,NM_000794	chr5,chr5	+,-	HRH2,DRD1	-1779,-215605
chr11:85566758-85567799	chr11	+	85566785	85567645	True	NM_032943,NM_173556	chr11,chr11	-,+	SYTL2,CCDC83	-44607,-692
chr17:74737724-74738743	chr17	+	74737980	74738586	True	NR_036608,NM_003016,NM_024311,NR_030366,NM_001195427	chr17,chr17,chr17,chr17,chr17	-,-,+,-,-	SRSF2,SRSF2,MFSD11,MIR636,SRSF2	-4487,-4487,-4257,-5350,-4487
chr1:155143962-155145415	chr1	+	155143979	155145128	True	NM_025058,NM_173852	chr1,chr1	+,-	TRIM46,KRTCAP2	1231,726
chr7:1596361-1596815	chr7	+	1596660	1596864	True	NR_021487,NM_001097620	chr7,chr7	+,-	KIAA1908,TMEM184A	12844,-594
chr5:749622-750160	chr5	+	749650	749824	True	NM_018140,NM_007030	chr5,chr5	+,-	CEP72,TPPP	-137296,-56140
chr16:10836357-10837688	chr16	+	10836559	10837701	True	NM_002484,NM_144674	chr16,chr16	+,-	NUBP1,TEKT5	-4,-47757
chr16:31266994-31267367	chr16	+	31266993	31267367	True	NM_001145808,NM_000632,NM_152901	chr16,chr16,chr16	+,+,-	ITGAM,ITGAM,PYDC1	3920,3920,-38598
chr1:196970854-196972432	chr1	+	196970898	196972419	True	NM_030787,NM_001994	chr1,chr1	+,-	CFHR5,F13B	-24283,64028
chr22:36552844-36553302	chr22	+	36552921	36553351	True	NM_145641,NM_145640,NM_145642,NM_001136540,NR_027833,NR_027834,NR_027835	chr22,chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,+,-,-,-	APOL3,APOL3,APOL3,APOL1,APOL3,APOL3,APOL3	8924,3676,8924,95765,3676,3676,3676
chr12:123014647-123015291	chr12	+	123014651	123015334	True	NR_036436,NM_014708,NR_036434,NR_036435,NM_023012	chr12,chr12,chr12,chr12,chr12	-,+,-,-,-	RSRC2,KNTC1,RSRC2,RSRC2,RSRC2	-3091,-2899,-3091,-3091,-3091
chr11:22359804-22361399	chr11	+	22359848	22361430	True	NM_020346,NM_022725	chr11,chr11	+,-	SLC17A6,FANCF	-232,286007
chr15:41806859-41808063	chr15	+	41807219	41807845	True	NM_002220,NM_206961,NM_002344,NM_001135685	chr15,chr15,chr15,chr15	+,-,-,-	ITPKA,LTK,LTK,LTK	-21155,-1134,-1134,-1134
chr10:15754522-15755578	chr10	+	15754673	15755488	True	NM_183005,NM_003638	chr10,chr10	+,-	RPP38,ITGA8	-615543,6339
chr1:53160888-53162004	chr1	+	53161379	53161847	True	NM_024646,NM_023077	chr1,chr1	+,-	ZYG11B,SELRC1	30283,2243
chr8:13320208-13320661	chr8	+	13320207	13320711	True	NM_001007090,NM_182643	chr8,chr8	+,-	C8orf48,DLC1	103640,51770
chr6:14932860-14933900	chr6	+	14932973	14933649	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	312877,729690
chr18:35145522-35145999	chr18	+	35145536	35146018	True	NM_020180,NM_001025088,NM_001025089,NM_001025087,NR_036202	chr18,chr18,chr18,chr18,chr18	-,-,-,-,+	CELF4,CELF4,CELF4,CELF4,MIR4318	32,32,32,32,91079
chr2:181844285-181844866	chr2	+	181844366	181844711	True	NM_001030311,NM_006357,NM_182678	chr2,chr2,chr2	-,+,+	CERKL,UBE2E3,UBE2E3	677173,630,400
chr1:20833234-20833631	chr1	+	20833450	20833520	True	NM_024544,NM_207334	chr1,chr1	-,+	MUL1,FAM43B	1204,45411
chr16:31120767-31121144	chr16	+	31120834	31121142	True	NM_001122957,NM_032188,NM_182958,NM_206824,NM_005881	chr16,chr16,chr16,chr16,chr16	+,+,+,-,+	BCKDK,MYST1,MYST1,VKORC1,BCKDK	-1223,7842,7842,-14558,-1223
chr3:156526266-156527278	chr3	+	156526280	156527065	True	NM_001004316,NR_003284	chr3,chr3	+,-	LEKR1,PA2G4P4	17030,2808
chr1:205537364-205537726	chr1	+	205537514	205537722	True	NM_181644,NR_027086	chr1,chr1	+,-	MFSD4,LOC284578	389,-11751
chr13:53225187-53226388	chr13	+	53225189	53226347	True	NM_006704,NM_001011705,NM_001130912	chr13,chr13,chr13	+,-,+	SUGT1,LECT1,SUGT1	483,87650,483
chr1:153604906-153605365	chr1	+	153605032	153605333	True	NM_001024210,NM_001024211,NM_001024212,NM_001024213,NM_006271,NM_015607,NM_005979	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,+,+,-	S100A13,S100A13,S100A13,S100A13,S100A1,CHTOP,S100A13	1292,-4915,-5288,-5508,-4213,1191,-4317
chr11:820380-820680	chr11	+	820473	820653	True	NM_145887,NR_002585,NM_020376,NM_173584	chr11,chr11,chr11,chr11	-,+,+,+	LRDD,SNORA52,PNPLA2,EFCAB4A	-15223,-8843,-1623,6931
chr8:65492963-65493209	chr8	+	65492963	65493249	True	NM_152414,NR_015374	chr8,chr8	+,-	BHLHE22,LOC401463	-219,-3143
chr3:111392573-111393428	chr3	+	111392657	111393319	True	NM_001185106,NM_024508,NM_153268	chr3,chr3,chr3	+,-,+	PLCXD2,ZBED2,PLCXD2	203,-78491,203
chr5:132941004-132941630	chr5	+	132941033	132941645	True	NM_003202,NM_015082	chr5,chr5	+,-	TCF7,FSTL4	508756,6628
chr1:32085233-32085758	chr1	+	32085248	32085594	True	NM_001525,NR_033688	chr1,chr1	+,-	HCRTR1,PEF1	-1998,24674
chr17:53620848-53621876	chr17	+	53621125	53621741	True	NM_021213,NM_012329	chr17,chr17	+,-	PCTP,MMD	206598,-121784
chr22:39796219-39796552	chr22	+	39796218	39796542	True	NM_006116,NM_153497,NM_001033853	chr22,chr22,chr22	+,+,-	TAB1,TAB1,RPL3	-512,-512,-80548
chr19:12912897-12913647	chr19	+	12912954	12913594	True	NM_005809,NM_181738,NM_006397	chr19,chr19,chr19	-,-,+	PRDX2,PRDX2,RNASEH2A	-260,-260,3833
chr15:44118647-44118929	chr15	+	44118650	44118722	True	NM_005926,NM_001167941,NM_024908	chr15,chr15,chr15	-,+,+	MFAP1,WDR76,WDR76	-1699,389,389
chr2:73431597-73431923	chr2	+	73431683	73431814	True	NM_006062,NM_032319,NM_001134462	chr2,chr2,chr2	+,-,+	SMYD5,C2orf7,NOTO	9551,28601,-2348
chr9:35113917-35114943	chr9	+	35114013	35114851	True	NM_006377,NM_025182	chr9,chr9	+,-	UNC13B,KIAA1539	47137,1092
chr7:99975288-99976607	chr7	+	99975585	99976445	True	NM_178273,NR_003613,NM_178272,NM_013439	chr7,chr7,chr7,chr7	+,-,+,+	PILRA,PMS2P1,PILRA,PILRA	-4579,-41655,-4579,-4579
chr19:14061783-14062304	chr19	+	14061920	14061988	True	NM_138353,NM_001146255,NM_001146254	chr19,chr19,chr19	+,-,-	DCAF15,PODNL1,PODNL1	1330,2270,2270
chr1:204167615-204168813	chr1	+	204167629	204168731	True	NM_005686,NM_002256	chr1,chr1	+,-	SOX13,KISS1	-125434,-2010
chr7:150102755-150102958	chr7	+	150102804	150102954	True	NR_027237,NM_002889	chr7,chr7	+,-	LOC728743,RARRES2	-15,-64041
chr3:11625118-11626421	chr3	+	11625122	11626470	True	NM_006395,NM_001128220	chr3,chr3	+,-	ATG7,VGLL4	-311163,-1286
chr12:27172391-27172889	chr12	+	27172688	27172859	True	NM_004264,NM_016551	chr12,chr12	+,-	MED21,TM7SF3	2623,-5349
chr8:27631858-27632106	chr8	+	27631904	27632104	True	NM_018246,NM_001017420	chr8,chr8	-,+	CCDC25,ESCO2	-1734,11
chr2:178788562-178789438	chr2	+	178788570	178789391	True	NM_001077358,NM_152945	chr2,chr2	-,+	PDE11A,RBM45	-1006,187790
chr19:33791032-33791338	chr19	+	33791094	33791372	True	NR_026887,NM_004364	chr19,chr19	+,-	LOC80054,CEBPA	2390,2108
chr21:15497017-15497238	chr21	+	15497021	15497139	True	NM_144770,NM_198996	chr21,chr21	+,-	RBM11,LIPI	91326,82165
chr4:159084575-159085020	chr4	+	159084789	159085024	True	NM_001128424,NM_016613,NM_001031700,NM_018342	chr4,chr4,chr4,chr4	-,-,-,+	FAM198B,FAM198B,FAM198B,TMEM144	9229,8745,9229,46376
chr1:113465623-113466012	chr1	+	113465937	113466047	True	NR_002796,NM_001166496	chr1,chr1	+,-	AKR7A2P1,SLC16A1	-16,32688
chr16:1275893-1276177	chr16	+	1275920	1276158	True	NM_012467,NM_024164,NM_003294	chr16,chr16,chr16	-,-,+	TPSG1,TPSB2,TPSAB1	-666,4077,14519
chr16:1275893-1276177	chr16	-	1294731	1294801	False	NM_024164,NM_003294	chr16,chr16	-,+	TPSB2,TPSAB1	-14546,-4104
chr2:223517087-223518458	chr2	+	223517193	223518267	True	NM_058165,NM_005687	chr2,chr2	+,-	MOGAT1,FARSB	18189,2621
chr7:99971173-99971886	chr7	+	99971307	99971921	True	NM_178273,NR_003613,NM_178272,NM_013439	chr7,chr7,chr7,chr7	+,-,+,+	PILRA,PMS2P1,PILRA,PILRA	-290,-37377,-290,-290
chr7:99971173-99971886	chr7	+	99956483	99956557	False	NM_178238,NR_003613	chr7,chr7	+,-	PILRB,PMS2P1	-908,-22553
chr5:138844589-138845476	chr5	+	138844589	138845112	True	NM_003339,NM_001077693	chr5,chr5	+,-	UBE2D2,ECSCR	95638,-2269
chr1:97191014-97191355	chr1	+	97191217	97191339	True	NM_000110,NM_021190	chr1,chr1	-,+	DPYD,PTBP2	1195336,-4099
chr21:37377004-37377362	chr21	+	37377006	37377411	True	NM_001007259,NM_001757	chr21,chr21	-,+	SETD4,CBR1	55250,64873
chr15:68118587-68119166	chr15	+	68118615	68119015	True	NM_001031807,NM_001031733	chr15,chr15	+,-	SKOR1,CALML4	-725,379483
chr19:56092603-56092925	chr19	+	56092619	56092945	True	NM_153219,NM_152600	chr19,chr19	+,-	ZNF524,ZNF579	18784,-408
chr1:109826666-109827077	chr1	+	109826672	109827008	True	NM_001408,NM_001005290,NM_032636,NM_001032291	chr1,chr1,chr1,chr1	+,-,-,-	CELSR2,PSRC1,PSRC1,PSRC1	-34082,-882,-882,-882
chr3:142348340-142349447	chr3	+	142348384	142348836	True	NM_001184,NM_002670	chr3,chr3	-,+	ATR,PLS1	-50716,-6169
chr22:39055839-39057337	chr22	+	39055943	39057110	True	NM_001002880,NM_001013647,NM_015373	chr22,chr22,chr22	+,-,+	CBY1,LOC646851,CBY1	-3348,-3309,-3348
chr2:219434788-219435999	chr2	+	219434789	219435912	True	NM_020935,NM_005444	chr2,chr2	-,+	USP37,RQCD1	-1705,-1162
chr20:62200950-62201155	chr20	+	62200959	62201181	True	NM_033405,NM_024059,NM_001037335	chr20,chr20,chr20	-,+,-	PRIC285,C20orf195,PRIC285	-1852,-16637,4461
chr17:66244327-66245605	chr17	+	66244573	66245331	True	NM_001033571,NM_001033570,NM_001033572,NM_001033574,NM_001174166,NM_016627,NM_001033569,NM_014960	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,-,+,+,+	AMZ2,AMZ2,AMZ2,AMZ2,SLC16A6,AMZ2,AMZ2,ARSG	-479,-479,-479,-479,42124,-479,-479,9991
chr19:53934340-53935088	chr19	+	53934921	53935075	True	NR_003148,NM_001008401,NM_033341	chr19,chr19,chr19	+,+,-	LOC147804,ZNF761,BIRC8	165,151,-140046
chrX:19820948-19822423	chrX	+	19820974	19822411	True	NM_001173456,NM_001024666	chrX,chrX	+,-	PDHA1,SH3KBP1	-459014,-3057
chr5:1884009-1884236	chr5	+	1884142	1884220	True	NM_016358,NM_004553	chr5,chr5	-,+	IRX4,NDUFS6	-1262,-82697
chr17:39767692-39768233	chr17	+	39767703	39768279	True	NM_005801,NM_005557	chr17,chr17	+,-	EIF1,KRT16	76847,850
chr1:16836693-16837762	chr1	+	16836918	16837778	True	NR_023386,NR_037446	chr1,chr1	-,+	CROCCP3,MIR3675	-17722,37630
chr1:16836693-16837762	chr1	+	16989663	16989725	False	NR_027504,NR_026752	chr1,chr1	+,-	MST1P2,CROCCP2	-17649,-32262
chr1:16836693-16837762	chr1	-	17070726	17070788	False	NR_002729,NR_037446	chr1,chr1	-,+	MST1P9,MIR3675	20241,-63027
chr11:3861573-3861854	chr11	+	3861604	3861874	True	NM_001665,NM_003156	chr11,chr11	-,+	RHOG,STIM1	389,15058
chr16:84218550-84219059	chr16	+	84218659	84219099	True	NM_139174,NM_139353,NM_005679,NM_001145400	chr16,chr16,chr16,chr16	+,-,-,+	ADAD2,TAF1C,TAF1C,ADAD2	5623,1613,1613,5623
chr3:48281011-48282514	chr3	+	48281409	48282330	True	NM_016089,NM_201567	chr3,chr3	+,-	ZNF589,CDC25A	265,-51608
chr10:48801115-48802997	chr10	+	48801486	48802681	True	NM_001042357,NM_153034,NM_001042389	chr10,chr10,chr10	-,+,-	PTPN20B,ZNF488,PTPN20A	4356,-446455,4356
chr10:48801115-48802997	chr10	+	46614559	46615754	False	NR_027632,NM_001042357,NM_001042389	chr10,chr10,chr10	+,-,-	FAM35B,PTPN20B,PTPN20A	281886,4356,4356
chr10:48801115-48802997	chr10	+	49321999	49323194	False	NR_033172,NM_002750	chr10,chr10	-,+	FRMPD2P1,MAPK8	60098,286492
chr3:138068082-138069053	chr3	+	138068192	138069004	True	NM_012219,NM_001085049,NM_178130	chr3,chr3,chr3	+,+,-	MRAS,MRAS,TXNDC6	-1618,-735,-19464
chr4:113471728-113473153	chr4	+	113472181	113473159	True	NM_016648,NM_024019	chr4,chr4	+,-	LARP7,NEUROG2	84960,-34853
chr17:29890275-29890958	chr17	+	29890791	29890989	True	NR_029710,NM_014210	chr17,chr17	+,-	MIR193A,EVI2A	-3830,-242024
chr10:46992008-46992268	chr10	+	46992008	46992254	True	NM_014696,NM_031912	chr10,chr10	+,-	GPRIN2,SYT15	1291,-21407
chr9:139093122-139093449	chr9	+	139093147	139093473	True	NM_015597,NM_014564,NM_178138	chr9,chr9,chr9	+,-,-	GPSM1,LHX3,LHX3	128458,1581,3532
chr1:28504930-28505763	chr1	+	28505080	28505652	True	NM_016311,NM_001164723,NM_000952	chr1,chr1,chr1	+,-,-	ATPIF1,PTAFR,PTAFR	56949,-1896,-1625
chr19:6111197-6112137	chr19	+	6111400	6111957	True	NM_000635,NM_030924,NM_134433	chr19,chr19,chr19	-,+,-	RFX2,ACSBG2,RFX2	-736,23752,-736
chr2:192124833-192125933	chr2	+	192124882	192125952	True	NM_003151,NM_001161819	chr2,chr2	-,+	STAT4,MYO1B	-108957,-14679
chr6:167370993-167371449	chr6	+	167371040	167371442	True	NM_003730,NM_007045	chr6,chr6	-,+	RNASET2,FGFR1OP	-963,41373
chr11:50372358-50373172	chr11	+	50372369	50373216	True	NR_024504,NR_003034	chr11,chr11	+,-	LOC646813,LOC441601	-4102,-114736
chr1:182302985-182303617	chr1	+	182303268	182303634	True	NR_034131,NM_001033056	chr1,chr1	+,-	NCRNA00272,GLUL	73121,56955
chr6:52108880-52109383	chr6	+	52109147	52109405	True	NM_052872,NM_002190	chr6,chr6	-,+	IL17F,IL17A	23,-58013
chr1:160762749-160763590	chr1	+	160763024	160763524	True	NM_002348,NM_001166663,NM_001033667	chr1,chr1,chr1	+,-,+	LY9,CD244,LY9	2403,69218,2403
chr11:27678112-27679730	chr11	+	27678188	27679585	True	NM_170735,NM_001143816,NR_033315	chr11,chr11,chr11	-,-,+	BDNF,BDNF,BDNF-AS1	1662,1662,-149840
chr10:46994015-46994317	chr10	+	46994021	46994363	True	NM_014696,NM_031912	chr10,chr10	+,-	GPRIN2,SYT15	-526,-23420
chr19:15197355-15198384	chr19	+	15197599	15198273	True	NM_001004713,NM_006844	chr19,chr19	+,-	OR1I1,ILVBL	73,38354
chr15:23158614-23160102	chr15	+	23158644	23159298	True	NR_024074,NR_003521	chr15,chr15	+,-	GOLGA8IP,WHAMML1	95943,49111
chr1:234054367-234055499	chr1	+	234054859	234055497	True	NM_173508,NM_005646	chr1,chr1	+,-	SLC35F3,TARBP1	-14238,559402
chr1:85516850-85517913	chr1	+	85517199	85517496	True	NM_145172,NM_018298	chr1,chr1	+,-	WDR63,MCOLN3	10496,-3030
chr6:11781085-11781580	chr6	+	11781159	11781474	True	NM_001143948,NM_032744,NM_002114	chr6,chr6,chr6	-,-,+	C6orf105,C6orf105,HIVEP1	-1879,-1879,231249
chr5:44388731-44388956	chr5	+	44388748	44388966	True	NM_004465,NM_016640	chr5,chr5	-,+	FGF10,MRPS30	-4,420060
chr10:89085515-89087258	chr10	+	89085679	89087134	True	NR_024397,NR_029408	chr10,chr10	-,+	LOC728190,LOC439994	15243,15033
chr18:56287445-56288108	chr18	+	56287579	56288018	True	NM_006785,NM_052947	chr18,chr18	+,-	MALT1,ALPK2	50599,8221
chr19:54642316-54642877	chr19	+	54642333	54642816	True	NM_014516,NM_024316	chr19,chr19	+,-	CNOT3,LENG1	-948,20680
chr10:60339258-60339942	chr10	+	60339276	60339709	True	NM_001080512,NM_152230	chr10,chr10	+,-	BICC1,IPMK	-66423,-311582
chr12:52760677-52760935	chr12	+	52760728	52760798	True	NM_002284,NM_002283	chr12,chr12	+,-	KRT86,KRT85	-65130,561
chr7:6684141-6684673	chr7	+	6684194	6684485	True	NM_017560,NM_006956	chr7,chr7	+,-	ZNF853,ZNF12	-28718,62132
chr3:185825543-185825885	chr3	+	185825549	185825909	True	NR_033752,NM_004454	chr3,chr3	+,-	LOC344887,ETV5	-139333,1042
chr8:43146485-43146809	chr8	+	43146583	43146777	True	NR_027669,NM_001005365,NM_001002920	chr8,chr8,chr8	-,+,+	RNF170,POTEA,POTEA	-394717,807,807
chr10:82050145-82051832	chr10	+	82050261	82051748	True	NM_000429,NM_032372	chr10,chr10	-,+	MAT1A,DYDC2	-827,64809
chr1:16818539-16818747	chr1	+	16818546	16818636	True	NR_023386,NM_018090	chr1,chr1	-,+	CROCCP3,NECAP2	610,-51440
chr3:129145849-129146878	chr3	+	129146123	129146829	True	NM_018262,NM_207307	chr3,chr3	+,-	IFT122,C3orf25	12138,717
chr2:109405098-109405972	chr2	+	109405287	109405588	True	NM_144978,NM_022336	chr2,chr2	+,-	CCDC138,EDAR	-2127,200299
chr18:55811719-55813650	chr18	+	55811955	55813376	True	NM_005603,NM_001144965,NM_001144971,NM_001144969,NM_001144968	chr18,chr18,chr18,chr18,chr18	-,+,+,+,+	ATP8B1,NEDD4L,NEDD4L,NEDD4L,NEDD4L	-341628,3188,3188,3188,3188
chr7:129287086-129288210	chr7	+	129287151	129288091	True	NM_001040110,NR_029614	chr7,chr7	+,-	NRF1,MIR182	-17295,122303
chr8:17248727-17249260	chr8	+	17248731	17249226	True	NM_001008539,NM_004686	chr8,chr8	+,-	SLC7A2,MTMR7	105370,21870
chr9:116861408-116861698	chr9	+	116861452	116861742	True	NM_138424,NM_032888	chr9,chr9	-,+	KIF12,COL27A1	-115,56488
chr17:34748065-34748275	chr17	+	34748166	34748248	True	NM_001123392,NM_004773	chr17,chr17	-,+	TBC1D3H,ZNHIT3	8852,94224
chr17:34748065-34748275	chr17	+	34799217	34799299	False	NM_001040282,NM_004773,NM_001001418	chr17,chr17,chr17	-,+,-	TBC1D3G,ZNHIT3,TBC1D3C	8854,43173,8842
chr14:95568227-95569564	chr14	+	95568699	95569613	True	NR_015415,NM_001195573	chr14,chr14	+,-	FLJ45244,DICER1	54411,30277
chr16:17565347-17565641	chr16	+	17565354	17565638	True	NR_003569,NM_022166	chr16,chr16	+,-	ABCC6P1,XYLT1	1016931,-616
chr21:35832139-35832474	chr21	+	35832142	35832354	True	NM_001127670,NM_001127669,NM_001127668,NM_058182	chr21,chr21,chr21,chr21	-,-,-,+	KCNE1,KCNE1,KCNE1,FAM165B	-4079,-240,-240,-84444
chr1:948263-948680	chr1	+	948435	948642	True	NM_005101,NM_001142467,NM_198576	chr1,chr1,chr1	+,-,+	ISG15,HES4,AGRN	204,-12883,6860
chr5:176897457-176899007	chr5	+	176897623	176898791	True	NM_001174102,NM_080881,NM_004395	chr5,chr5,chr5	+,-,-	PRR7,DBN1,DBN1	-22348,1130,1953
chr6:90347060-90347989	chr6	+	90347318	90348037	True	NM_020466,NR_028495,NR_028494,NR_028493,NM_001137667	chr6,chr6,chr6,chr6,chr6	-,-,-,-,+	LYRM2,LYRM2,LYRM2,LYRM2,CASP8AP2	487,229,229,229,191581
chr2:27617520-27618993	chr2	+	27617670	27618866	True	NM_014748,NR_002201	chr2,chr2	+,-	SNX17,FTH1P3	-24338,-1227
chr19:14586144-14586705	chr19	+	14586409	14586482	True	NM_000955,NM_001146693	chr19,chr19	-,+	PTGER1,LOC100130932	-235,13275
chr11:33061639-33062654	chr11	+	33061823	33062622	True	NM_018393,NM_001145541,NM_001326	chr11,chr11,chr11	+,+,-	TCP11L1,TCP11L1,CSTF3	-912,-314,120466
chr2:203873687-203874783	chr2	+	203873847	203874476	True	NM_018256,NM_001114132	chr2,chr2	-,+	WDR12,NBEAL1	-96898,5125
chr7:5227889-5229494	chr7	+	5228706	5229307	True	NM_016003,NM_015610,NR_034163,NM_001033519,NM_001033518	chr7,chr7,chr7,chr7,chr7	+,+,-,+,+	WIPI2,WIPI2,ZNF890P,WIPI2,WIPI2	527,527,-44529,527,527
chr7:36193563-36193909	chr7	+	36193574	36193846	True	NM_030636,NM_001199707	chr7,chr7	+,-	EEPD1,KIAA0895	-789,212986
chr14:23822773-23824043	chr14	+	23822861	23824056	True	NM_020372,NM_016609,NM_172314	chr14,chr14,chr14	-,-,+	SLC22A17,SLC22A17,IL25	-1382,-781,17961
chr4:76650656-76651185	chr4	+	76650688	76651156	True	NM_203505,NM_003715	chr4,chr4	-,+	G3BP2,USO1	-52021,-910
chr7:156743155-156743637	chr7	+	156743376	156743580	True	NM_022458,NM_138400	chr7,chr7	-,+	LMBR1,NOM1	-57474,-1010
chr9:34125194-34125807	chr9	+	34125193	34125785	True	NM_015397,NM_001171201	chr9,chr9	-,+	DCAF12,UBAP1	1036,53217
chr5:138774899-138775246	chr5	+	138774942	138775168	True	NM_001033112,NM_152686	chr5,chr5	+,-	PAIP2,DNAJC18	-96859,96
chr7:30632879-30633869	chr7	+	30633030	30633853	True	NR_037669,NM_001202482,NM_002047	chr7,chr7,chr7	-,-,+	GGCT,CRHR2,GARS	-88573,88338,327
chr3:196160647-196161088	chr3	+	196160843	196160913	True	NM_001105573,NM_015562	chr3,chr3	+,-	FBXO45,UBXN7	134811,-1498
chr2:111182054-111182556	chr2	+	111182112	111182604	True	NR_037626,NR_037627,NR_027142,NR_027143	chr2,chr2,chr2,chr2	+,-,-,-	LOC100507334,LOC100288570,LOC440895,LOC440895	-178948,-719,-719,-719
chr2:111182054-111182556	chr2	-	110704055	110704479	False	NR_037627,NR_036225,NR_027142,NR_027143	chr2,chr2,chr2,chr2	+,-,+,+	LOC100288570,MIR4267,LOC440895,LOC440895	787,123190,787,787
chr2:111182054-111182556	chr2	-	111002003	111002427	False	NR_027063,NR_037626	chr2,chr2	-,+	NCRNA00116,LOC100507334	-21486,787
chr2:178076989-178077249	chr2	+	178077021	178077283	True	NM_194247,NR_036075	chr2,chr2	+,-	HNRNPA3,MIR3128	138,43505
chr20:34195371-34195951	chr20	+	34195371	34195807	True	NR_024377,NM_003116	chr20,chr20	-,+	FER1L4,SPAG4	-7,8001
chr10:101086933-101087323	chr10	+	101087156	101087329	True	NM_021828,NM_020348	chr10,chr10	-,+	HPSE2,CNNM1	-91524,1526
chr6:26217338-26218070	chr6	+	26217350	26218054	True	NM_003532,NM_003518,NM_021052	chr6,chr6,chr6	+,-,+	HIST1H3E,HIST1H2BG,HIST1H2AE	7328,-478,-253
chr1:149760270-149760871	chr1	+	149760279	149760695	True	NM_001161334,NM_000566	chr1,chr1	-,+	HIST2H2BF,FCGR1A	23283,-6080
chr1:149760270-149760871	chr1	-	120929516	120929932	False	NM_001004340,NR_027337,NM_001017986	chr1,chr1,chr1	-,+,-	FCGR1B,HIST2H2BA,FCGR1B	6062,-23533,6062
chr1:149760270-149760871	chr1	+	149375358	149375774	False	NR_027484,NM_001024599	chr1,chr1	+,-	FCGR1C,HIST2H2BF	-6115,23505
chr21:46028571-46030099	chr21	+	46028711	46029851	True	NM_198695,NM_198689,NM_198688	chr21,chr21,chr21	+,+,-	KRTAP10-8,KRTAP10-7,KRTAP10-6	2144,-8277,-16325
chr19:3572016-3572408	chr19	+	3572121	3572337	True	NM_174983,NM_006339	chr19,chr19	-,+	C19orf28,HMG20B	-14550,605
chr1:45453132-45453477	chr1	+	45453142	45453486	True	NM_000374,NM_020365,NM_001166588	chr1,chr1,chr1	+,-,-	UROD,EIF2B3,EIF2B3	24318,-781,-781
chr4:86752978-86753378	chr4	+	86753150	86753398	True	NM_001042669,NM_138981	chr4,chr4	+,-	ARHGAP24,MAPK10	-53358,275458
chr7:73584541-73584977	chr7	+	73584769	73585025	True	NM_002914,NM_031992,NM_022170	chr7,chr7,chr7	-,+,+	RFC2,EIF4H,EIF4H	83763,3680,3680
chr9:34567374-34567943	chr9	+	34567505	34567983	True	NR_024369,NM_001842	chr9,chr9	+,-	LOC415056,CNTFR	26,21789
chr13:29247499-29247720	chr13	+	29247601	29247769	True	NM_001135919,NM_015932	chr13,chr13	-,+	SLC46A3,POMP	45431,-14511
chr8:145729707-145730094	chr8	+	145729726	145730030	True	NM_032902,NM_005309,NM_004260,NM_138431	chr8,chr8,chr8,chr8	+,+,-,+	PPP1R16A,GPT,RECQL4,MFSD3	-7668,-312,13230,4521
chr17:56603723-56603988	chr17	+	56603776	56603928	True	NM_002876,NM_004687,NM_004574,NM_080415,NM_080416,NR_037156,NR_037155	chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,-,-,-,-	RAD51C,MTMR4,SEPT4,SEPT4,SEPT4,SEPT4,SEPT4	166034,-8525,2900,5565,5565,1496,2900
chr1:167598591-167599277	chr1	+	167598603	167599231	True	NM_052862,NM_003851	chr1,chr1	+,-	RCSD1,CREG1	242,-75547
chr1:149869532-149870685	chr1	+	149869793	149870663	True	NM_175065,NM_016074	chr1,chr1	-,+	HIST2H2AB,BOLA1	-10327,491
chr3:126244588-126245906	chr3	+	126244596	126245908	True	NM_144639,NM_001165974,NM_152889	chr3,chr3,chr3	-,-,+	UROC1,UROC1,CHST13	-7980,-7980,-1471
chr18:56885943-56887028	chr18	+	56886120	56886950	True	NM_013435,NM_001012512,NM_001012513,NM_002091	chr18,chr18,chr18,chr18	-,+,+,+	RAX,GRP,GRP,GRP	53725,449,449,449
chr17:41020213-41020437	chr17	+	41020371	41020475	True	NR_002773,NR_027254	chr17,chr17	+,-	AOC4,LOC388387	-1260,30326
chr15:25491899-25492312	chr15	+	25492047	25492275	True	NR_003353,NR_003358,NM_130838,NR_003344,NR_003352,NR_003351,NR_003357,NR_003356,NR_003355,NR_003354,NR_003302,NR_003303,NR_003359	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,-,+,+,+,+,+,+,+,+,+,+	SNORD115-38,SNORD115-43,UBE3A,SNORD115-29,SNORD115-37,SNORD115-36,SNORD115-42,SNORD115-41,SNORD115-40,SNORD115-39,SNORD115-10,SNORD115-11,SNORD115-44	-7113,2069,158428,2069,-8965,2069,216,-1473,-3337,-5205,216,2069,3730
chr3:17727016-17728560	chr3	+	17727547	17728589	True	NM_001134381,NR_037465	chr3,chr3	-,+	TBC1D5,MIR3714	12973,-752910
chr17:26371387-26372776	chr17	+	26371387	26372543	True	NM_001076680,NM_016231	chr17,chr17	-,+	C17orf108,NLK	-150978,-1756
chr6:24495767-24496617	chr6	+	24495837	24496479	True	NM_170740,NM_001503,NM_001080,NM_177483	chr6,chr6,chr6,chr6	+,-,+,-	ALDH5A1,GPLD1,ALDH5A1,GPLD1	-691,-5987,-691,-6038
chr3:12837222-12837991	chr3	+	12837357	12837921	True	NM_012298,NM_001162499,NM_018306	chr3,chr3,chr3	+,+,-	CAND2,CAND2,TMEM40	249,249,-36549
chr1:161128374-161128718	chr1	+	161128378	161128748	True	NM_016406,NM_001122764,NM_012475,NM_000309,NM_001199873,NM_001014443	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,-,+	UFC1,PPOX,USP21,PPOX,B4GALT3,USP21	-4895,7432,505,7432,19060,505
chr15:41136997-41137471	chr15	+	41137096	41137270	True	NM_017726,NM_003710,NM_181642,NM_001032367	chr15,chr15,chr15,chr15	-,+,+,+	PPP1R14D,SPINT1,SPINT1,SPINT1	-16189,-901,-901,-504
chr20:4988059-4988346	chr20	+	4988207	4988403	True	NM_005116,NR_028370,NM_203327	chr20,chr20,chr20	-,+,-	SLC23A2,PCNA-AS1,SLC23A2	-6062,111828,2594
chr2:65359069-65359992	chr2	+	65359235	65359966	True	NM_004161,NM_015147,NM_015543	chr2,chr2,chr2	-,+,-	RAB1A,CEP68,RAB1A	-1800,-75791,-1800
chr4:88240256-88241629	chr4	+	88240507	88241446	True	NM_001136230,NM_178135,NM_024047	chr4,chr4,chr4	-,-,+	HSD17B13,HSD17B13,NUDT9	2660,2660,102288
chr8:37825158-37826253	chr8	+	37825163	37826292	True	NM_000025,NM_004095	chr8,chr8	-,+	ADRB3,EIF4EBP1	-979,61727
chr13:111599951-111600842	chr13	+	111600279	111600835	True	NM_017664,NM_001113511	chr13,chr13	-,+	ANKRD10,ARHGEF7	-32863,166788
chr12:109532096-109532930	chr12	+	109532127	109532737	True	NM_001205179,NM_080911,NM_001205180,NM_001145375,NM_001145374,NM_003362,NM_001001655,NR_026930,NR_026931	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,+,-,-,-,+,-,-,-	ALKBH2,UNG,ALKBH2,ALKBH2,ALKBH2,UNG,ALKBH2,ALKBH2,ALKBH2	-834,2661,-834,-834,-834,3185,-834,-834,-834
chr16:32940624-32941355	chr17	+	36638110	36638160	True	NM_025248,NM_001199417	chr17,chr17	-,+	SRCIN1,ARHGAP23	124073,-53441
chr16:32940624-32941355	chr16	+	32940934	32941286	False	NR_003083,NM_016212	chr16,chr16	-,+	SLC6A10P,TP53TG3	-44471,263693
chr16:32940624-32941355	chr16	+	31997403	31997649	False	NR_002827,NM_003414	chr16,chr16	-,+	HERC2P4,ZNF267	166275,-112375
chr15:33360549-33362297	chr15	+	33360701	33361933	True	NM_001036,NM_001103184	chr15,chr15	+,-	RYR3,FMN1	241243,-616
chr1:117453601-117454047	chr1	+	117453694	117454026	True	NM_020440,NM_001145635	chr1,chr1	+,-	PTGFRN,TRIM45	-1056,210435
chr17:45262124-45262703	chr17	+	45262136	45262309	True	NM_001114091,NM_001002841,NM_001256	chr17,chr17,chr17	-,+,-	CDC27,MYL4,CDC27	4417,24118,4417
chr15:79380249-79381027	chr15	+	79380273	79380682	True	NM_001145648,NR_029705,NM_002891	chr15,chr15,chr15	-,+,-	RASGRF1,MIR184,RASGRF1	2594,121447,2594
chr1:25559496-25560307	chr1	+	25559538	25560081	True	NM_001127691,NM_207170,NM_015484	chr1,chr1,chr1	+,-,-	RHD,SYF2,SYF2	38899,-525,-525
chr19:50190206-50190512	chr19	+	50190224	50190504	True	NM_001101340,NR_033397,NM_001136052,NM_198318,NM_152359,NM_001199752,NM_001199753,NM_001536,NM_001571	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,+,+,+,-	C19orf76,PRMT1,CPT1C,PRMT1,CPT1C,CPT1C,CPT1C,PRMT1,IRF3	1437,-9779,3860,-9779,3860,3860,3860,-9779,-21092
chr12:24736115-24736847	chr12	+	24736256	24736843	True	NR_030625,NR_029451	chr12,chr12	+,-	MIR920,C12orf67	-370952,309
chr5:175512819-175513855	chr5	+	175512965	175513904	True	NR_036494,NM_001079529	chr5,chr5	-,+	LOC643201,FAM153B	112444,-1107
chr5:175512819-175513855	chr5	-	177178263	177178766	False	NR_003615,NM_173663	chr5,chr5	+,-	LOC728554,FAM153A	123495,28789
chr5:175512819-175513855	chr5	+	177459030	177459533	False	NM_006261,NM_001079527	chr5,chr5	-,+	PROP1,FAM153C	-35787,-23392
chr9:123476508-123476721	chr9	+	123476636	123476710	True	NR_027442,NM_001080497	chr9,chr9	+,-	LOC100288842,MEGF9	79064,105
chr19:17829198-17829776	chr19	+	17829501	17829819	True	NM_001080421,NM_018174	chr19,chr19	-,+	UNC13A,MAP1S	-30493,483
chr5:140096288-140097761	chr5	+	140096479	140097534	True	NR_026705,NR_026704,NM_002109,NR_026703	chr5,chr5,chr5,chr5	+,+,-,+	VTRNA1-3,VTRNA1-2,HARS,VTRNA1-1	8209,976,-25508,-5673
chrY:24220116-24220578	chrY	+	24220223	24220603	True	NM_001002758,NR_001527	chrY,chrY	-,+	PRY2,TTTY6	21601,70508
chrY:24220116-24220578	chrY	-	28132257	28132461	False	NR_002179,NR_002176	chrY,chrY	-,+	TTTY17C,TTTY3B	-801337,-257671
chrY:24220116-24220578	chrY	+	25829908	25830112	False	NR_001524,NM_020363	chrY,chrY	-,+	TTTY3,DAZ2	257707,-464367
chrY:24220116-24220578	chrY	-	24658086	24658466	False	NM_004676,NR_001527	chrY,chrY	+,-	PRY,TTTY6	-21593,-70480
chr20:33760942-33762472	chr20	+	33760989	33762395	True	NM_006404,NR_026728	chr20,chr20	+,-	PROCR,EDEM2	-1266,-25828
chr11:87910506-87911280	chr11	+	87910736	87911250	True	NM_022337,NM_000372	chr11,chr11	-,+	RAB38,TYR	-2101,999789
chr8:53629958-53630537	chr8	+	53630093	53630352	True	NM_014781,NM_001083617,NM_005285	chr8,chr8,chr8	-,-,+	RB1CC1,RB1CC1,NPBWR1	-3067,-3067,222115
chr3:119379412-119379790	chr3	+	119379412	119379804	True	NM_033364,NM_022135	chr3,chr3	+,-	C3orf15,POPDC2	42064,-8
chr4:186394002-186394922	chr4	+	186394317	186394777	True	NM_152775,NM_001114357,NM_001145411	chr4,chr4,chr4	-,+,-	CCDC110,C4orf47,CCDC110	-1404,-43829,-1404
chr9:103237403-103238106	chr9	+	103237462	103238005	True	NM_003692,NM_017746	chr9,chr9	+,-	TMEFF1,TEX10	-1993,-122203
chr5:131705408-131705767	chr5	+	131705437	131705699	True	NM_003060,NR_037500,NR_037898	chr5,chr5,chr5	+,-,-	SLC22A5,MIR3936,LOC553103	-87,-4146,-41
chr5:149113807-149115408	chr5	+	149114250	149115306	True	NM_001172698,NM_001892,NM_133263	chr5,chr5,chr5	+,-,+	PPARGC1B,CSNK1A1,PPARGC1B	-4486,-183243,-4486
chr11:82784920-82786283	chr11	+	82784920	82786233	True	NM_015885,NM_014488	chr11,chr11	+,-	PCF11,RAB30	81903,-2036
chr1:29450019-29450391	chr1	+	29450193	29450440	True	NM_001003682,NM_001195001,NM_001171868	chr1,chr1,chr1	-,+,-	TMEM200B,PTPRU,TMEM200B	31,112587,-1180
chr18:3245976-3247298	chr18	+	3246369	3247306	True	NM_019856,NM_006471	chr18,chr18	-,+	MYOM1,MYL12A	-26263,221
chr11:60143472-60143918	chr11	+	60143600	60143951	True	NM_021201,NM_206939,NM_206938,NM_206940,NM_022349	chr11,chr11,chr11,chr11,chr11	+,+,+,+,-	MS4A7,MS4A7,MS4A7,MS4A7,MS4A6A	2006,2006,2006,2006,-192926
chr7:50862836-50864133	chr7	+	50862878	50863764	True	NM_001001555,NR_033845	chr7,chr7	-,+	GRB10,LOC100129427	-1719,-263480
chr6:73932342-73933477	chr6	+	73932471	73933514	True	NM_001126063,NM_001017361	chr6,chr6	-,+	KHDC1L,C6orf221	1711,138885
chr5:135671514-135671737	chr5	+	135671612	135671784	True	NM_001167576,NM_001001419	chr5,chr5	-,+	TRPC7,SMAD5	29430,-203134
chr4:6714707-6715586	chr4	+	6714923	6715600	True	NM_203462,NM_018366	chr4,chr4	-,+	MRFAP1L1,CNO	-3317,2241
chr9:130617037-130617253	chr9	+	130617144	130617302	True	NM_000118,NM_001114753,NM_001018078	chr9,chr9,chr9	-,-,+	ENG,ENG,FPGS	-97,-97,-51687
chr11:66234916-66235547	chr11	+	66235075	66235509	True	NM_170739,NM_145065,NM_001098510	chr11,chr11,chr11	-,+,+	MRPL11,PELI3,PELI3	-28765,-790,-790
chr7:54609733-54609934	chr7	+	54609765	54609841	True	NM_182546,NM_001012456	chr7,chr7	+,-	VSTM2A,SEC61G	177,217148
chr19:35071082-35071357	chr19	+	35071123	35071261	True	NR_027620,NM_001012320	chr19,chr19	-,+	LOC643719,ZNF302	-2527,97305
chr12:105217341-105217912	chr12	+	105217341	105217871	True	NM_152318,NM_032148	chr12,chr12	+,-	C12orf45,SLC41A2	162226,104651
chr9:67679606-67679883	chr9	+	67679828	67679900	True	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	114339,246860
chr9:67679606-67679883	chr9	-	47169568	47169640	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-3538838,-482053
chr8:64100150-64100926	chr8	+	64100219	64100572	True	NM_152758,NM_000370	chr8,chr8	+,-	YTHDF3,TTPA	-19162,-101607
chr3:126422447-126422890	chr3	+	126422450	126422794	True	NM_032343,NM_052883	chr3,chr3	+,-	CHCHD6,TXNRD3	323,-48483
chr14:77605737-77605955	chr14	+	77605746	77605924	True	NM_174976,NM_033426	chr14,chr14	-,+	ZDHHC22,KIAA1737	2260,-41219
chr14:74350482-74351712	chr14	+	74350546	74351680	True	NM_152445,NM_021188	chr14,chr14	-,+	FAM161B,ZNF410	65212,1905
chr1:22377828-22378235	chr1	+	22377876	22378066	True	NM_001039802,NM_030761,NM_044472,NM_001791	chr1,chr1,chr1,chr1	+,-,+,+	CDC42,WNT4,CDC42,CDC42	1053,91503,1053,1053
chr12:31404198-31405312	chr12	+	31404398	31405358	True	NR_026806,NM_001135811	chr12,chr12	+,-	FLJ13224,FAM60A	71891,73813
chr8:143834537-143834785	chr8	+	143834546	143834784	True	NM_016647,NM_205545	chr8,chr8	+,-	C8orf55,LYPD2	-25976,-594
chr5:76010513-76010892	chr5	+	76010521	76010815	True	NR_028375,NM_001992,NM_004101	chr5,chr5,chr5	+,+,-	NCRUPAR,F2R,F2RL2	-2809,1052,-91281
chr9:21535588-21536644	chr9	+	21535704	21536623	True	NR_027054,NR_029505,NM_024013	chr9,chr9,chr9	-,-,+	LOC554202,MIR31,IFNA1	23131,-23520,-95321
chr7:75158946-75159373	chr7	+	75159141	75159263	True	NM_001099435,NR_028059	chr7,chr7	+,-	SPDYE5,PMS2P3	-34900,-1688
chr12:53714380-53714999	chr12	+	53714437	53714995	True	NM_021640,NM_001173466,NM_015665	chr12,chr12,chr12	+,-,-	C12orf10,AAAS,AAAS	-21020,467,467
chr8:144975105-144975591	chr8	+	144975308	144975370	True	NM_000837,NM_031308	chr8,chr8	+,-	GRINA,EPPK1	88855,-27874
chr14:58708541-58708997	chr14	+	58708649	58708769	True	NM_152132,NM_002788,NR_029434	chr14,chr14,chr14	+,+,-	PSMA3,PSMA3,FLJ31306	2823,2823,56140
chr11:45937160-45938999	chr11	+	45937599	45938905	True	NM_152312,NM_004813,NM_001080446,NM_057174	chr11,chr11,chr11,chr11	+,-,-,-	GYLTL1B,PEX16,C11orf94,PEX16	4290,819,-8766,819
chr16:31884265-31885076	chr16	+	31884506	31884906	True	NR_002827,NM_003414	chr16,chr16	-,+	HERC2P4,ZNF267	279026,172
chr4:1859536-1859899	chr4	+	1859551	1859849	True	NM_012318,NM_001042424	chr4,chr4	-,+	LETM1,WHSC1	-1577,13273
chr4:172728501-172729778	chr4	+	172728553	172729680	True	NR_036751,NM_001034845	chr4,chr4	-,+	HSP90AA6P,GALNTL6	-1202418,4894
chr11:69454365-69454800	chr11	+	69454476	69454814	True	NM_153451,NM_053056	chr11,chr11	-,+	ORAOV1,CCND1	35409,1058
chrX:49681710-49682429	chrX	+	49682028	49682130	True	NM_001127898,NM_001127899,NR_026742	chrX,chrX,chrX	+,+,-	CLCN5,CLCN5,LOC158572	5094,5094,-38069
chr2:99766064-99767644	chr2	+	99766194	99767522	True	NR_037935,NR_037936,NM_015929,NM_025244,NM_144706,NM_145197,NM_145196,NM_145199,NM_145198,NM_182911,NM_001204830	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,-,+,+,+,+,+,-,+	LIPT1,LIPT1,LIPT1,TSGA10,C2orf15,LIPT1,LIPT1,LIPT1,LIPT1,TSGA10,LIPT1	4014,3895,3895,3722,-8069,3895,3895,3895,3895,-8157,4014
chr12:12231215-12231861	chr12	+	12231361	12231720	True	NM_138722,NM_138723,NM_030766,NM_002336	chr12,chr12,chr12,chr12	+,+,+,-	BCL2L14,BCL2L14,BCL2L14,LRP6	-7015,-7539,-7015,188148
chrX:101911400-101912594	chrX	+	101911609	101912643	True	NM_021992,NM_014710,NM_001099410,NM_001184727,NM_001099411	chrX,chrX,chrX,chrX,chrX	-,+,+,+,+	TMSB15A,GPRASP1,GPRASP1,GPRASP1,GPRASP1	-139910,-5366,-5366,-5331,-5366
chr4:99178096-99179746	chr4	+	99178406	99179784	True	NM_021159,NM_174952,NM_001100428,NM_001100429,NM_001100430,NM_001100426,NM_001100427	chr4,chr4,chr4,chr4,chr4,chr4,chr4	+,-,+,+,+,+,+	RAP1GDS1,C4orf37,RAP1GDS1,RAP1GDS1,RAP1GDS1,RAP1GDS1,RAP1GDS1	2742,-114015,2742,2742,2742,2742,2742
chr18:65176264-65176552	chr18	+	65176337	65176571	True	NM_032160,NR_033921	chr18,chr18	-,+	DSEL,LOC643542	7464,7211
chr17:3379529-3380303	chr17	+	3379531	3380124	True	NM_001170696,NM_001170697,NM_001170695,NM_001170698,NM_001170699,NM_000049,NM_032598,NM_001128085	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,+,-,+	SPATA22,SPATA22,SPATA22,SPATA22,SPATA22,ASPA,SPATA22,ASPA	-4389,-4405,-4389,-4432,-4464,-286,-4490,-2178
chr19:42079083-42079459	chr19	+	42079118	42079502	True	NM_001098506,NM_033543,NM_001817	chr19,chr19,chr19	+,+,-	CEACAM21,CEACAM21,CEACAM4	3028,3028,53990
chr11:3662480-3662767	chr11	+	3662485	3662795	True	NM_001079536,NM_053017,NM_004314	chr11,chr11,chr11	-,-,+	ART5,ART5,ART1	801,740,3565
chr9:96794187-96795753	chr9	+	96794344	96795788	True	NM_177995,NM_021570	chr9,chr9	+,-	PTPDC1,BARX1	-1322,-76736
chr15:25455018-25455544	chr15	+	25455149	25455545	True	NR_003315,NR_003314,NR_003313,NR_003312,NR_003311,NR_003310,NR_022010,NR_003495,NR_003309,NM_130838,NR_003342,NR_003343,NR_003307	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,-,+,+,+	SNORD115-23,SNORD115-22,SNORD115-21,SNORD115-20,SNORD115-19,SNORD115-18,PAR4,SNORD115-24,SNORD115-17,UBE3A,SNORD115-25,SNORD115-26,SNORD115-15	1397,-135,-3791,-3791,-5696,-5696,1293,3260,-5696,195158,5142,8218,-3791
chr8:128748586-128749152	chr8	+	128748635	128749179	True	NM_002467,NR_024393	chr8,chr8	+,-	MYC,LOC727677	-371,-254251
chr7:142633330-142633562	chr7	+	142633357	142633611	True	NM_178829,NM_019841	chr7,chr7	+,-	C7orf34,TRPV5	2991,-2537
chr20:39318870-39319115	chr20	+	39318913	39319157	True	NM_003286,NM_005461	chr20,chr20	+,-	TOP1,MAFB	338304,-1037
chr4:113470192-113470775	chr4	+	113470323	113470757	True	NM_016648,NM_024019	chr4,chr4	+,-	LARP7,NEUROG2	87362,-32995
chr5:133970085-133970873	chr5	+	133970622	133970916	True	NM_021982,NM_016103,NM_001033503	chr5,chr5,chr5	+,-,-	SEC24A,SAR1B,SAR1B	13562,-2089,-2089
chr11:77785513-77786133	chr11	+	77785829	77786009	True	NM_001204054,NM_001204055,NM_003251,NM_001203260,NM_001203261,NM_001203262,NM_004549	chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,+,-,-,-,-	NDUFC2,NDUFC2,THRSP,NDUFC2-KCTD14,NDUFC2-KCTD14,NDUFC2-KCTD14,NDUFC2	5306,5306,-10973,5306,5306,5306,5306
chr14:99738819-99739439	chr14	+	99738875	99739334	True	NM_022898,NM_001099402,NM_138576	chr14,chr14,chr14	-,+,-	BCL11B,CCNK,BCL11B	-1053,208404,-1053
chr12:133610574-133612321	chr12	+	133610574	133611944	True	NM_003428,NM_001164715,NM_001127372	chr12,chr12,chr12	+,-,+	ZNF84,ZNF605,ZNF84	1933,-77682,2035
chr1:161233858-161235618	chr1	+	161234707	161235482	True	NM_001077469,NM_001102566	chr1,chr1	-,+	NR1I3,PCP4L1	-26707,-6248
chr9:39818011-39818876	chr9	+	39818273	39818333	True	NR_003528,NM_001085452	chr9,chr9	-,+	LOC653501,FAM75A1	-353747,66641
chr15:59066401-59068152	chr15	+	59066726	59067846	True	NM_001040450,NM_001110,NM_001040453	chr15,chr15,chr15	+,-,+	FAM63B,ADAM10,FAM63B	-3384,-24549,-3384
chr11:76775669-76777323	chr11	+	76776163	76777240	True	NM_182833,NM_004055	chr11,chr11	-,+	GDPD4,CAPN5	221273,751
chr6:155613223-155614115	chr6	+	155613370	155613963	True	NM_001001346,NM_016020	chr6,chr6	+,-	CLDN20,TFB1M	-28274,21713
chr22:36904172-36905240	chr22	+	36904354	36905220	True	NM_001102371,NM_024955,NM_145343	chr22,chr22,chr22	-,-,+	FOXRED2,FOXRED2,APOL1	-1206,-1264,-255289
chr3:157816328-157816870	chr3	+	157816453	157816867	True	NM_001163678,NM_003030,NM_006884,NM_016625	chr3,chr3,chr3,chr3	-,-,-,+	SHOX2,SHOX2,SHOX2,RSRC1	7135,7135,7135,11024
chr20:61053438-61053660	chr20	+	61053442	61053694	True	NM_001024,NM_080473	chr20,chr20	+,-	RPS21,GATA5	-91372,-2416
chr3:10288492-10289470	chr3	+	10288883	10289384	True	NM_001134941,NM_014760	chr3,chr3	-,+	GHRL,TATDN2	43092,792
chr9:131446243-131446800	chr9	+	131446261	131446676	True	NM_052844,NM_001122821,NM_003011	chr9,chr9,chr9	-,+,+	WDR34,SET,SET	-27132,-378,4832
chr17:29298498-29298968	chr17	+	29298540	29298746	True	NM_001184992,NM_197939,NM_024683,NM_032322,NR_002221	chr17,chr17,chr17,chr17,chr17	+,+,-,+,+	RNF135,RNF135,C17orf42,RNF135,DPRXP4	-636,-636,-65254,-636,3606
chr16:71264951-71266648	chr16	+	71265327	71266645	True	NM_017558,NM_001198542,NM_001198543,NM_001740,NM_032821	chr16,chr16,chr16,chr16,chr16	-,-,-,+,-	HYDIN,HYDIN,HYDIN,CALB2,HYDIN	-735,-702,-702,125970,-758
chr2:118773682-118774851	chr2	+	118773841	118774549	True	NM_019044,NM_016133	chr2,chr2	-,+	CCDC93,INSIG2	-2102,71500
chr12:123267375-123267865	chr12	+	123267710	123267779	True	NM_032554,NM_201435,NM_032573,NR_027918	chr12,chr12,chr12,chr12	-,+,+,+	GPR81,CCDC62,CCDC62,CCDC62	-52581,-8699,-8699,-8699
chr2:228582870-228583380	chr2	+	228582881	228583246	True	NM_001130046,NM_025243	chr2,chr2	+,-	CCL20,SLC19A3	95311,-136
chrX:152011136-152012967	chrX	+	152011435	152012909	True	NM_004344,NM_015922	chrX,chrX	-,+	CETN2,NSDHL	-12134,-11977
chr3:107940282-107940802	chr3	+	107940318	107940755	True	NM_018010,NM_007072	chr3,chr3	-,+	IFT57,HHLA2	716,80576
chr7:128000269-128000804	chr7	+	128000377	128000551	True	NM_001114726,NM_001098786,NM_001174164	chr7,chr7,chr7	-,+,-	PRRT4,C7orf68,PRRT4	1238,95332,1238
chr7:138795508-138796616	chr7	+	138795573	138796376	True	NM_024625,NM_001144920,NM_020119	chr7,chr7,chr7	-,+,-	ZC3HAV1,TTC26,ZC3HAV1	-1108,22113,-1108
chr20:34746808-34747414	chr20	+	34746816	34747411	True	NM_012156,NR_027451	chr20,chr20	+,-	EPB41L1,LOC647979	-4205,-107934
chr14:94853009-94854395	chr14	+	94853180	94854184	True	NM_001127704,NM_001127705,NM_001127706,NM_001127707,NM_001127700,NM_001127701,NM_001127702,NM_001127703,NM_006215,NM_001002236,NM_001002235,NM_000295	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	-,-,-,-,-,-,-,-,+,-,-,-	SERPINA1,SERPINA1,SERPINA1,SERPINA1,SERPINA1,SERPINA1,SERPINA1,SERPINA1,SERPINA4,SERPINA1,SERPINA1,SERPINA1	2895,2895,2895,2895,2895,2895,2895,2895,173598,2895,2895,1019
chr2:219123829-219124245	chr2	+	219123837	219124257	True	NM_001077191,NM_170699,NM_001087,NM_001077194	chr2,chr2,chr2,chr2	+,+,-,+	GPBAR1,GPBAR1,AAMP,GPBAR1	1480,1480,10686,1480
chr4:3370760-3371963	chr4	+	3370989	3371962	True	NM_002337,NM_198227	chr4,chr4	-,+	LRPAP1,RGS12	162313,60
chr9:27573758-27574174	chr9	+	27573776	27574106	True	NM_018325,NM_020124,NM_145005	chr9,chr9,chr9	-,+,-	C9orf72,IFNK,C9orf72	-295,-49515,14
chr2:208632429-208632934	chr2	+	208632507	208632903	True	NM_152523,NM_003468	chr2,chr2	+,-	CCNYL1,FZD5	-56294,1290
chr7:86568886-86570585	chr7	+	86568950	86570407	True	NM_152748,NM_001142326	chr7,chr7	-,+	KIAA1324L,DMTF1	24936,211269
chr12:6754363-6754917	chr12	+	6754433	6754776	True	NM_001164094,NM_020400,NM_032489	chr12,chr12,chr12	+,-,-	COPS7A,LPAR5,ACRBP	78373,-9136,1855
chr10:45870218-45871024	chr10	+	45870453	45871063	True	NM_001004297,NM_000698	chr10,chr10	-,+	OR13A1,ALOX5	-59397,-875
chr7:16684028-16684238	chr7	+	16684038	16684260	True	NM_020319,NM_014038,NM_001159767,NR_027624	chr7,chr7,chr7,chr7	-,+,+,+	ANKMY2,BZW2,BZW2,BZW2	1232,1498,1498,1498
chr6:44063449-44064018	chr6	+	44063819	44064025	True	NM_018426,NM_032111	chr6,chr6	+,-	TMEM63B,MRPL14	31350,31216
chr3:79068663-79069696	chr3	+	79068791	79069399	True	NM_001128929,NM_001145845,NM_133631	chr3,chr3,chr3	+,-,-	ROBO2,ROBO1,ROBO1	-1921679,-182,-182
chr15:41124883-41125512	chr15	+	41125106	41125303	True	NM_017726,NM_003710,NM_001130143	chr15,chr15,chr15	-,+,-	PPP1R14D,SPINT1,PPP1R14D	-4199,10942,-4199
chr12:3858469-3859193	chr12	+	3858475	3859083	True	NM_001144958,NM_001144959,NM_032680,NM_019854	chr12,chr12,chr12,chr12	-,-,-,+	EFCAB4B,EFCAB4B,EFCAB4B,PRMT8	3333,3333,3333,-258101
chr1:76200153-76201622	chr1	+	76200153	76201231	True	NM_152697,NM_001127328	chr1,chr1	-,+	SLC44A5,ACADM	-123354,-10173
chr7:37960972-37962619	chr7	+	37961553	37962649	True	NM_003014,NM_017549	chr7,chr7	-,+	SFRP4,EPDR1	-5028,-1448
chr3:11034011-11034350	chr3	+	11034141	11034357	True	NM_003042,NR_027102	chr3,chr3	+,-	SLC6A1,LOC285370	62,-228264
chr1:28974799-28975234	chr1	+	28974965	28975283	True	NR_004407,NM_005644,NM_001135218	chr1,chr1,chr1	+,-,-	RNU11,TAF12,TAF12	-76,-5361,-5361
chr18:55715366-55716929	chr18	+	55715380	55716827	True	NM_001144967,NM_015277,NM_001144964,NM_005603	chr18,chr18,chr18,chr18	+,+,+,-	NEDD4L,NEDD4L,NEDD4L,ATP8B1	-3812,-3812,-973,-245053
chr7:76607871-76608190	chr7	+	76607892	76608234	True	NR_023383,NM_006682	chr7,chr7	+,-	PMS2P11,FGL2	1904,220966
chr7:76607871-76608190	chr7	+	76109785	76110125	False	NR_003262,NM_001102596	chr7,chr7	-,+	FDPSL2A,DTX2	-5468,-9
chr4:37827652-37828232	chr4	+	37827681	37828127	True	NM_001085400,NM_018290	chr4,chr4	-,+	RELL1,PGM2	-139682,154
chr1:33502378-33502739	chr1	+	33502577	33502787	True	NM_001625,NR_037592,NM_001199199,NM_013411,NR_037591,NM_052998	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,+	AK2,AK2,AK2,AK2,AK2,ADC	-65,-65,-65,-65,-65,43926
chr1:169600144-169601971	chr1	+	169600164	169602007	True	NM_003005,NM_018186	chr1,chr1	-,+	SELP,C1orf112	-787,162542
chr9:139875454-139876056	chr9	+	139875475	139875775	True	NM_000954,NM_004669,NM_207510	chr9,chr9,chr9	+,-,+	PTGDS,CLIC3,LCNL1	-3570,15299,1669
chr16:2197655-2197993	chr16	+	2197827	2197897	True	NR_002736,NM_014353,NM_032271	chr16,chr16,chr16	-,+,+	SNORD60,RAB26,TRAF7	7259,753,7901
chr10:99342100-99343379	chr10	+	99342366	99343294	True	NM_001009997,NM_178832,NM_001134670,NM_138413	chr10,chr10,chr10,chr10	+,-,+,+	C10orf62,MORN4,HOGA1,HOGA1	6155,50102,807,807
chr3:158450447-158450792	chr3	+	158450514	158450670	True	NM_206963,NM_002888,NM_001167903	chr3,chr3,chr3	-,-,+	RARRES1,RARRES1,MFSD1	-239,-239,69044
chr22:35778135-35778503	chr22	+	35778233	35778297	True	NM_005368,NM_002133	chr22,chr22	-,+	MB,HMOX1	235137,-1233
chr2:189857637-189859000	chr2	+	189857928	189858969	True	NR_036076,NR_037401	chr2,chr2	-,+	MIR3129,MIR3606	138919,1386
chr19:7795842-7796087	chr19	+	7795906	7795976	True	NM_198492,NM_001144904	chr19,chr19	-,+	CLEC4G,CLEC4M	1131,32058
chr21:34863189-34863664	chr21	+	34863270	34863627	True	NM_032195,NM_001040192,NM_017833	chr21,chr21,chr21	+,-,-	SON,DNAJC28,DNAJC28	51722,447,214
chrX:228708-229368	chrY	+	178713	179355	False	NM_018390,NM_012227	chrY,chrY	+,-	PLCXD1,GTPBP6	-30703,1582
chrX:228708-229368	chrX	+	228713	229355	True	NM_018390,NM_012227	chrX,chrX	+,-	PLCXD1,GTPBP6	-30703,1582
chr1:152009044-152009494	chr1	+	152009137	152009422	True	NR_024237,NM_005620	chr1,chr1	+,-	LOC100132111,S100A11	-198243,139
chr9:27109194-27109992	chr9	+	27109266	27109815	True	NM_000459,NM_022901	chr9,chr9	+,-	TEK,LRRC19	-170,-103575
chr17:19139184-19139934	chr17	+	19139258	19139904	True	NM_014964,NM_148921,NM_001102664,NR_031591	chr17,chr17,chr17,chr17	+,+,+,-	EPN2,EPN2,EPN2,MIR1180	785,785,785,108033
chr17:19139184-19139934	chr17	+	19013096	19013741	False	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	17040,-62760
chr15:76602159-76603267	chr15	+	76602616	76603254	True	NM_001127716,NM_145805,NM_000126	chr15,chr15,chr15	-,+,-	ETFA,ISL2,ETFA	606,25892,606
chr14:67673135-67674745	chr14	+	67673371	67674681	True	NM_173526,NM_015994	chr14,chr14	+,-	FAM71D,ATP6V1D	-17325,152089
chr3:99378960-99379347	chr3	+	99378965	99379323	True	NM_020351,NM_014890	chr3,chr3	+,-	COL8A1,FILIP1L	-21562,215773
chr19:6134700-6135126	chr19	+	6134832	6134968	True	NM_134433,NM_030924	chr19,chr19	-,+	RFX2,ACSBG2	-24168,741
chr14:103022103-103022308	chr14	+	103022105	103022169	True	NM_152326,NR_036192	chr14,chr14	-,+	ANKRD9,MIR4309	-45977,-16175
chr10:105217028-105217624	chr10	+	105217080	105217612	True	NR_024552,NM_001001412,NM_004210,NM_015916	chr10,chr10,chr10,chr10	-,-,+,-	CALHM2,CALHM1,NEURL,CALHM2	-4918,1086,36122,-4918
chr7:116964594-116964800	chr7	+	116964608	116964736	True	NR_002332,NR_024047,NM_003391	chr7,chr7,chr7	+,-,-	ST7OT3,WNT2,WNT2	-141924,-1265,-1265
chr2:197792123-197793115	chr2	+	197792157	197793030	True	NM_001080539,NM_024989	chr2,chr2	+,-	CCDC150,PGAP1	-287852,-703
chr10:51551319-51552052	chr10	+	51551527	51551837	True	NM_001077685,NM_138634,NM_002443	chr10,chr10,chr10	-,+,+	AGAP7,MSMB,MSMB	-65200,-2025,-2025
chr10:69882001-69882513	chr10	+	69882033	69882250	True	NM_032578,NM_022079	chr10,chr10	+,-	MYPN,HERC4	-12834,-46930
chr8:26241145-26241653	chr8	+	26241271	26241645	True	NM_007257,NM_004331	chr8,chr8	-,+	PNMA2,BNIP3L	129889,-799
chr11:778639-779269	chr11	+	779048	779238	True	NM_001004,NM_182612	chr11,chr11	+,-	RPLP2,PDDC1	30697,-1561
chr5:178319637-178320084	chr5	+	178319749	178320061	True	NM_000843,NM_030613	chr5,chr5	-,+	GRM6,ZFP2	102117,2854
chr1:240255357-240255677	chr1	+	240255414	240255666	True	NM_022469,NM_020066	chr1,chr1	-,+	GREM2,FMN2	519846,-280
chr5:176875182-176875764	chr5	+	176875216	176875800	True	NM_001174102,NM_030567,NM_080881,NM_001174101	chr5,chr5,chr5,chr5	+,+,-,+	PRR7,PRR7,DBN1,PRR7	59,-1471,24121,-1471
chrX:134653198-134654820	chrX	+	134653398	134654371	True	NM_007131,NM_182540	chrX,chrX	-,+	ZNF75D,DDX26B	-223433,183
chr17:47783655-47784987	chr17	+	47783805	47784978	True	NM_005827,NM_001199155	chr17,chr17	-,+	SLC35B1,MYST2	354,81002
chr1:145612884-145613855	chr1	+	145613183	145613903	True	NM_014455,NM_006468	chr1,chr1	+,-	RNF115,POLR3C	-2199,-2299
chr1:145612884-145613855	chr1	-	147549367	147549418	False	NM_001101663,NM_001097616	chr1,chr1	-,+	NBPF24,GPR89C	60714,-123852
chr1:145612884-145613855	chr1	-	146006912	146007644	False	NM_001101663,NM_001097616	chr1,chr1	-,+	NBPF24,GPR89C	60652,-123095
chr1:192778176-192778895	chr1	+	192778191	192778790	True	NM_002923,NM_001199261	chr1,chr1	+,-	RGS2,UCHL5	-73,249790
chr10:14918958-14919201	chr10	+	14918958	14919250	True	NM_001029954,NR_034181,NM_024670,NM_001193426,NM_001193427,NM_001193424,NM_001193425	chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,+,+,+,+,+,+	CDNF,SUV39H2,SUV39H2,SUV39H2,SUV39H2,SUV39H2,SUV39H2	-38975,1531,1648,1531,1614,1531,1614
chr9:125874953-125875713	chr9	+	125875079	125875663	True	NR_030331,NM_005294,NR_026677	chr9,chr9,chr9	-,+,-	MIR600,GPR21,NCRNA00287	-1157,-78284,2143
chr10:64028635-64030262	chr10	+	64028858	64030103	True	NM_014951,NM_145307	chr10,chr10	+,-	ZNF365,RTKN2	103812,-392
chr1:109256520-109257386	chr1	+	109256786	109257221	True	NM_144584,NM_001144937	chr1,chr1	-,+	HENMT1,FNDC7	-52638,-1288
chr12:49320683-49321986	chr12	+	49320952	49321815	True	NM_001143782,NM_001143781,NM_033124,NM_016594	chr12,chr12,chr12,chr12	-,-,+,-	FKBP11,FKBP11,CCDC65,FKBP11	-1622,-2288,-23110,-1622
chr6:43541891-43542963	chr6	+	43542058	43542845	True	NM_020750,NM_006502	chr6,chr6	-,+	XPO5,POLH	1017,1032
chr4:169077947-169078708	chr4	+	169077965	169078757	True	NM_017631,NM_007193	chr4,chr4	-,+	DDX60,ANXA10	161251,-64328
chr5:31208486-31210465	chr5	+	31208589	31210000	True	NM_004932,NM_001100412	chr5,chr5	+,-	CDH6,DROSHA	-14856,322332
chr13:41528085-41528470	chr13	+	41528084	41528311	True	NM_007187,NM_001145353	chr13,chr13	+,-	WBP4,ELF1	107385,28162
chr19:8384366-8384888	chr19	+	8384556	8384662	True	NM_005001,NM_001031	chr19,chr19	-,+	NDUFA7,RPS28	1668,1721
chr1:147139831-147140824	chr1	+	147140120	147140860	True	NM_004326,NM_016361	chr1,chr1	+,-	BCL9,ACP6	-127000,1824
chr6:24914418-24914670	chr6	+	24914598	24914714	True	NM_015895,NM_014722	chr6,chr6	+,-	GMNN,FAM65B	-139495,-3403
chr10:95753148-95753380	chr10	+	95753194	95753294	True	NR_002319,NM_016341	chr10,chr10	-,+	PIPSL,PLCE1	-31522,451
chrX:48334672-48334916	chrX	+	48334671	48334937	True	NM_012280,NM_033518,NM_177439,NM_177434	chrX,chrX,chrX,chrX	+,-,+,+	FTSJ1,SLC38A5,FTSJ1,FTSJ1	-173,-6027,-173,1442
chr6:74104799-74105047	chr6	+	74104815	74105017	True	NM_001080507,NM_018665	chr6,chr6	-,+	OOEP,DDX43	-25300,-581
chr19:3522120-3522499	chr19	+	3522189	3522445	True	NM_001136197,NM_001145165,NM_001136198	chr19,chr19,chr19	+,-,+	FZR1,DOHH,FZR1	508,-21251,508
chr7:153098145-153098835	chr7	+	153098149	153098873	True	NM_005431,NM_001039350	chr7,chr7	-,+	XRCC2,DPP6	-724899,485545
chr12:12223338-12224868	chr12	+	12223695	12224751	True	NM_138722,NM_138723,NM_030766,NM_002336	chr12,chr12,chr12,chr12	+,+,+,-	BCL2L14,BCL2L14,BCL2L14,LRP6	28,-100,28,195110
chr4:171012813-171014145	chr4	+	171013305	171014114	True	NM_016228,NM_182662,NM_173872	chr4,chr4,chr4	-,-,+	AADAT,AADAT,CLCN3	-2122,-1933,-471634
chr2:20644583-20644946	chr2	+	20644587	20644995	True	NM_015317,NM_004040	chr2,chr2	-,+	PUM2,RHOB	-117443,1839
chr15:75232956-75234126	chr15	+	75233200	75234176	True	NM_002435,NM_004255	chr15,chr15	+,-	MPI,COX5A	-50841,-2705
chr5:175811889-175812578	chr5	+	175811888	175812562	True	NM_016391,NM_138820	chr5,chr5	-,+	NOP16,HIGD2A	3028,3221
chr2:21025882-21027047	chr2	+	21025885	21026760	True	NM_021925,NM_182828	chr2,chr2	-,+	C2orf43,GDF7	-3058,-159512
chr1:16562334-16562641	chr1	+	16562528	16562596	True	NM_001114600,NM_030907	chr1,chr1	+,-	C1orf144,RSG1	130986,1113
chr1:167485774-167486479	chr1	+	167485841	167486227	True	NM_052862,NM_000734,NM_198053	chr1,chr1,chr1	+,-,-	RCSD1,CD247,CD247	113246,1670,1670
chr7:2393670-2394122	chr7	+	2393853	2394104	True	NM_013321,NM_001037283,NM_003751	chr7,chr7,chr7	-,+,+	SNX8,EIF3B,EIF3B	-39754,369,369
chr3:195867634-195868087	chr3	+	195867993	195868053	True	NR_034088,NM_001128148	chr3,chr3	+,-	LOC401109,TFRC	1453,-58961
chr10:26504206-26504423	chr10	+	26504223	26504453	True	NM_001134366,NM_001012750,NM_000818	chr10,chr10,chr10	+,-,+	GAD2,ABI1,GAD2	782,645613,782
chr11:57336939-57337393	chr11	+	57336959	57337367	True	NM_004223,NM_001105565,NM_198183	chr11,chr11,chr11	-,+,-	UBE2L6,SMTNL1,UBE2L6	-1779,-26897,-1506
chr12:94543308-94543522	chr12	+	94543413	94543571	True	NM_001042399,NM_005761	chr12,chr12	-,+	CCDC41,PLXNC1	310243,-965
chr19:50429861-50431494	chr19	+	50429887	50431447	True	NM_001193357,NM_016553,NM_012068,NM_012346,NM_001193646,NM_153718,NM_153719,NM_172374	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,+,-,+,-,-,-	NUP62,NUP62,ATF5,NUP62,ATF5,NUP62,NUP62,IL4I1	1402,1591,511,1376,952,1391,1391,1365
chr9:132080893-132081434	chr9	+	132081008	132081185	True	NM_001012715,NM_203434	chr9,chr9	+,-	C9orf106,IER5L	2109,-140468
chr6:35099146-35100513	chr6	+	35099923	35100529	True	NM_018679,NM_152753,NM_001093728	chr6,chr6,chr6	-,+,-	TCP11,SCUBE3,TCP11	8708,81660,8708
chr10:50883536-50885298	chr10	+	50884550	50885316	True	NM_182554,NM_001042427,NM_001143996	chr10,chr10,chr10	+,+,-	C10orf53,C10orf53,OGDHL	2367,2367,85159
chr8:28342404-28343345	chr8	+	28342514	28343355	True	NM_017412,NM_172366,NM_145866	chr8,chr8,chr8	+,-,+	FZD3,FBXO16,FZD3	8366,4480,8366
chr7:16504753-16506260	chr7	+	16504916	16506309	True	NM_001195280,NM_015464	chr7,chr7	+,-	LOC100506049,SOSTDC1	60195,80
chr5:140012179-140012383	chr5	+	140012183	140012405	True	NM_001040021,NM_000591,NM_018502,NM_001174104,NM_001174105	chr5,chr5,chr5,chr5,chr5	-,-,+,-,-	CD14,CD14,TMCO6,CD14,CD14	931,680,6606,931,931
chr5:89921710-89923408	chr5	+	89921772	89923453	True	NM_198273,NR_003149	chr5,chr5	-,+	LYSMD3,GPR98	-96371,-67223
chr5:64776562-64776831	chr5	+	64776564	64776868	True	NM_015342,NM_197941	chr5,chr5	+,-	PPWD1,ADAMTS6	82262,894
chr10:43901393-43901698	chr10	+	43901494	43901606	True	NM_004966,NM_001098208,NR_026693,NM_001098204,NM_001098205,NM_001098206,NM_001098207	chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,-,+,-,-,-,-	HNRNPF,HNRNPF,ZNF487P,HNRNPF,HNRNPF,HNRNPF,HNRNPF	3100,-9215,30967,3140,2776,1743,-8700
chr4:187119584-187120416	chr4	+	187119744	187120450	True	NM_207352,NM_021069	chr4,chr4	+,-	CYP4V2,SORBS2	-7122,-241874
chr1:152594611-152595757	chr1	+	152594813	152595433	True	NM_178433,NM_178431	chr1,chr1	+,-	LCE3B,LCE3A	-8577,196
chr22:40743144-40743352	chr22	+	40743145	40743315	True	NM_001123378,NM_000026,NM_020831	chr22,chr22,chr22	+,+,-	ADSL,ADSL,MKL1	-692,-692,289425
chr5:173116881-173117167	chr5	+	173117036	173117214	True	NR_027109,NM_138369	chr5,chr5	+,-	LOC285593,BOD1	-110430,-73370
chr1:8938150-8938459	chr1	+	8938227	8938311	True	NM_001215,NM_001201483,NM_001428	chr1,chr1,chr1	+,-,-	CA6,ENO1,ENO1	67610,-6592,890
chr1:205328618-205329448	chr1	+	205328759	205329419	True	NM_014858,NM_018203	chr1,chr1	+,-	TMCC2,KLHDC8A	-131772,-2720
chr1:165599040-165599610	chr1	+	165599082	165599640	True	NM_004528,NR_026744	chr1,chr1	+,-	MGST3,LOC400794	809,-47741
chr19:6393800-6394605	chr19	+	6393978	6394340	True	NM_002096,NM_032306	chr19,chr19	-,+	GTF2F1,ALKBH7	-687,-21585
chr2:37516339-37516553	chr2	+	37516418	37516596	True	NM_012413,NM_005813	chr2,chr2	+,-	QPCT,PRKD3	55156,27676
chr5:140103141-140103547	chr5	+	140103337	140103409	True	NR_026705,NR_026704,NM_002109	chr5,chr5,chr5	+,+,-	VTRNA1-3,VTRNA1-2,HARS	2334,-4878,-32366
chr10:15209929-15210164	chr10	+	15210021	15210177	True	NM_183005,NM_004808	chr10,chr10	+,-	RPP38,NMT2	-70890,568
chr17:73585720-73585927	chr17	+	73585719	73585845	True	NR_003587,NM_020753	chr17,chr17	+,-	MYO15B,CASKIN2	-1631,-74092
chr2:23685232-23685724	chr2	+	23685361	23685573	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	464413,-77114
chr2:73969221-73969935	chr2	+	73969227	73969744	True	NM_001080474,NM_016058	chr2,chr2	+,-	C2orf78,TPRKB	41571,-4710
chr9:26890910-26892128	chr9	+	26891018	26892147	True	NM_024828,NM_001099223,NM_001167575	chr9,chr9,chr9	-,+,-	C9orf82,IFT74,C9orf82	729,54889,729
chr5:172486094-172486358	chr5	+	172486093	172486239	True	NM_001168393,NR_026682,NM_001168394,NM_153607	chr5,chr5,chr5,chr5	+,-,+,+	C5orf41,LOC100268168,C5orf41,C5orf41	-2790,-99722,-2790,-2790
chr11:3529193-3530159	chr11	+	3529374	3529971	True	NM_007152,NR_002720	chr11,chr11	-,+	ZNF195,TRPC2	-128926,117742
chr12:67020980-67022536	chr12	+	67021043	67022215	True	NM_001178074,NM_033647	chr12,chr12	-,+	GRIP1,HELB	50760,-324744
chr3:11762370-11763318	chr3	+	11762494	11763145	True	NM_014667,NM_003178	chr3,chr3	-,+	VGLL4,SYN2	-274,282716
chr19:50315804-50316450	chr19	+	50315879	50316459	True	NM_025129,NR_033269,NM_001171937,NM_030973	chr19,chr19,chr19,chr19	-,-,-,+	FUZ,FUZ,FUZ,MED25	158,158,158,5076
chr1:172630433-172631497	chr1	+	172630445	172631269	True	NM_153747,NM_000639	chr1,chr1	-,+	PIGC,FASLG	-217215,-2311
chr16:1281833-1282114	chr16	+	1281857	1282071	True	NM_012467,NM_024164,NM_003294	chr16,chr16,chr16	-,-,+	TPSG1,TPSB2,TPSAB1	-6603,-1672,8606
chr16:1281833-1282114	chr16	-	1289313	1289527	False	NM_024164,NM_003294	chr16,chr16	-,+	TPSB2,TPSAB1	-9128,1150
chr16:1281833-1282114	chr16	-	1304347	1304561	False	NM_024164,NM_012217	chr16,chr16	-,+	TPSB2,TPSD1	-24162,1711
chrX:135057796-135058615	chrX	+	135057795	135058430	True	NM_173470,NM_006359,NM_001042537,NM_001177651	chrX,chrX,chrX,chrX	-,+,+,+	MMGT1,SLC9A6,SLC9A6,SLC9A6	-1661,9155,9155,9152
chr2:217236534-217236756	chr2	+	217236637	217236711	True	NM_014140,NM_020814	chr2,chr2	+,-	SMARCAL1,MARCH4	40425,89
chr11:76493223-76493801	chr11	+	76493291	76493745	True	NM_015516,NR_024042	chr11,chr11	+,-	TSKU,GUCY2E	539,-60458
chr8:42624477-42625034	chr8	+	42624867	42624946	True	NM_001199279,NM_000749,NM_004198	chr8,chr8,chr8	-,+,-	CHRNA6,CHRNB3,CHRNA6	-938,-72356,-938
chr5:111093015-111093337	chr5	+	111093048	111093270	True	NM_001142479,NM_001142481,NR_015370,NM_004772,NM_001142482,NM_001142483,NM_001142480,NM_001142478,NM_001142477,NM_001142476	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,-,+,-,-,-,-,-,-,-	C5orf13,C5orf13,NCRNA00219,C5orf13,C5orf13,C5orf13,C5orf13,C5orf13,C5orf13,C5orf13	32,-32,402952,-103,-34,-1100,32,179,573,695
chr1:203054843-203055660	chr1	+	203054962	203055696	True	NM_015053,NM_002479	chr1,chr1	+,-	PPFIA4,MYOG	-34702,33
chr22:37582699-37583044	chr22	+	37582739	37582959	True	NM_013385,NM_182486,NM_031910	chr22,chr22,chr22	+,-,-	CYTH4,C1QTNF6,C1QTNF6	95535,1421,1421
chr14:23290867-23291077	chr14	+	23290866	23291120	True	NM_181307,NM_181304,NM_003982,NM_181306,NM_181305,NM_180982,NM_001126106,NM_001126105,NM_178336	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,+,-,+,+,+,-,-,+	MRPL52,MRPL52,SLC7A7,MRPL52,MRPL52,MRPL52,SLC7A7,SLC7A7,MRPL52	7971,7971,-5794,7971,7971,7971,-1852,-5794,7971
chr7:16684364-16684836	chr7	+	16684446	16684816	True	NM_020319,NM_014038,NM_001159767,NR_027624	chr7,chr7,chr7,chr7	-,+,+,+	ANKMY2,BZW2,BZW2,BZW2	676,942,942,942
chr12:2921755-2922293	chr12	+	2921798	2922216	True	NM_018463,NM_031474	chr12,chr12	+,-	ITFG2,NRIP2	-62,22059
chr19:46807202-46807425	chr19	+	46807213	46807339	True	NM_152796,NM_152795,NM_152794,NM_022462,NM_032040	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	HIF3A,HIF3A,HIF3A,HIF3A,CCDC8	-5631,-6961,-408,-5631,109630
chr9:91607001-91608808	chr9	+	91607026	91608774	True	NM_001001938,NM_016848,NM_001142413,NM_005226	chr9,chr9,chr9,chr9	+,-,+,+	C9orf47,SHC3,C9orf47,S1PR3	-1299,184958,-1299,-715
chr10:102758401-102758814	chr10	+	102758424	102758758	True	NM_032429,NM_032112	chr10,chr10	+,-	LZTS2,MRPL43	-1611,-11152
chr2:160760958-160761159	chr2	+	160761080	160761150	True	NM_001198760,NM_002349,NM_001198759,NM_022826	chr2,chr2,chr2,chr2	-,-,-,+	LY75-CD302,LY75,LY75-CD302,MARCH7	167,167,167,-192121
chr21:34183531-34185412	chr21	+	34183845	34185442	True	NM_001162496,NM_001162495,NM_019596,NR_024623	chr21,chr21,chr21,chr21	-,-,-,+	C21orf62,C21orf62,C21orf62,C21orf49	663,663,663,-39486
chr19:40030940-40031731	chr19	+	40031007	40031500	True	NM_152361,NM_153232,NM_182704	chr19,chr19,chr19	-,-,+	EID2B,EID2,SELV	-7513,-169,-25306
chr6:42690088-42691464	chr6	+	42690119	42691426	True	NM_000322,NR_037141	chr6,chr6	-,+	PRPH2,LOC442211	15,3887
chr19:6588908-6589559	chr19	+	6588912	6589061	True	NM_001252,NM_003811	chr19,chr19	-,+	CD70,TNFSF9	2152,-57953
chr1:249134231-249134540	chr1	+	249134230	249134299	True	NM_024836,NM_030645	chr1,chr1	+,-	ZNF672,SH3BP5L	-1758,-14076
chr19:49618550-49618903	chr19	+	49618602	49618882	True	NM_022165,NM_003660,NM_018111	chr19,chr19,chr19	+,+,-	LIN7B,PPFIA3,C19orf73	-1036,3780,3565
chr17:16745631-16745894	chr17	+	16745633	16745839	True	NR_026810,NR_029392	chr17,chr17	+,-	FAM106C,KRT16P2	-53627,-9486
chr17:16745631-16745894	chr17	-	18333661	18333737	False	NM_148918,NR_001443	chr17,chr17	-,+	SHMT1,LOC339240	-66805,-8217
chr17:16745631-16745894	chr17	+	20417298	20417374	False	NM_001190790,NR_029393	chr17,chr17	+,-	CDRT15L2,KRT16P3	65662,-9487
chr12:9598375-9598703	chr12	+	9598390	9598694	True	NR_033399,NR_024374	chr12,chr12	-,+	DDX12,LOC642846	2124,-162188
chr12:9598375-9598703	chr12	-	31228906	31229210	False	NM_004399,NM_001135811,NM_030653,NM_152438	chr12,chr12,chr12,chr12	+,-,+,+	DDX11,FAM60A,DDX11,DDX11	-2178,249961,-2178,-2178
chr12:9598375-9598703	chr12	-	9438375	9438679	False	NR_036263,NR_024374	chr12,chr12	-,+	MIR1244-3,LOC642846	-46228,-2173
chr17:25403184-25404682	chr17	+	25403305	25404719	True	NM_015626,NM_000625	chr17,chr17	+,-	WSB1,NOS2	216386,722886
chr5:733248-734715	chr5	+	733478	734666	True	NM_018140,NM_007030	chr5,chr5	+,-	CEP72,TPPP	-121124,-39968
chr5:733248-734715	chr5	+	826028	826078	False	NM_001166260,NM_024786	chr5,chr5	+,-	TRIP13,ZDHHC11	66890,25073
chr13:21666951-21668126	chr13	+	21667222	21667944	True	NM_014572,NM_005870	chr13,chr13	-,+	LATS2,SAP18	-31500,46708
chr18:74726712-74728559	chr18	+	74726917	74728355	True	NM_007345,NM_002385,NM_001025081,NM_001025090,NM_001025092	chr18,chr18,chr18,chr18,chr18	+,-,-,-,-	ZNF236,MBP,MBP,MBP,MBP	-190859,750,750,750,750
chr15:69704087-69705910	chr15	+	69704192	69705913	True	NM_138555,NM_004856,NM_006305	chr15,chr15,chr15	+,+,-	KIF23,KIF23,ANP32A	774,774,-590931
chr22:41213850-41214564	chr22	+	41213938	41214404	True	NM_001204827,NM_006358	chr22,chr22	+,-	XPNPEP3,SLC25A17	38680,1038
chrX:31505611-31507543	chrX	+	31505726	31507144	True	NM_203391,NM_004014	chrX,chrX	+,-	GK,DMD	-834303,19335
chr11:128813540-128813844	chr11	+	128813578	128813884	True	NM_000890,NM_001195194,NM_001195195,NM_022112	chr11,chr11,chr11,chr11	+,-,-,-	KCNJ5,TP53AIP1,TP53AIP1,TP53AIP1	-52316,-5849,-284,-284
chr1:20311917-20312551	chr1	+	20312023	20312456	True	NM_000300,NM_001161728,NM_000929,NM_001161729,NM_001161727	chr1,chr1,chr1,chr1,chr1	-,-,+,-,-	PLA2G2A,PLA2G2A,PLA2G5,PLA2G2A,PLA2G2A	-5091,-5091,84244,-5871,-5091
chr17:19652054-19652447	chr17	+	19652144	19652484	True	NM_000382,NM_001135168,NM_001135167,NM_000691	chr17,chr17,chr17,chr17	+,-,-,-	ALDH3A2,ALDH3A1,ALDH3A1,ALDH3A1	-100131,-3372,-3219,-398
chr6:26182833-26183096	chr6	+	26183011	26183081	True	NM_003523,NM_003539	chr6,chr6	+,-	HIST1H2BE,HIST1H4D	942,6273
chr5:72144161-72144385	chr5	+	72144196	72144344	True	NM_153188,NM_152625	chr5,chr5	+,-	TNPO1,ZNF366	-317,-340947
chr1:6085253-6085914	chr1	+	6085362	6085896	True	NM_001199860,NM_172130,NM_015102,NM_003636	chr1,chr1,chr1,chr1	+,+,-,+	KCNAB2,KCNAB2,NPHP4,KCNAB2	8451,176,-32829,176
chr1:145826825-145827036	chr1	+	145826879	145826949	True	NM_001097612,NM_001097613,NM_001097616,NR_036541	chr1,chr1,chr1,chr1	-,-,+,-	GPR89A,GPR89A,GPR89C,GPR89A	204,204,56918,204
chr1:90102361-90103818	chr1	+	90102603	90103854	True	NR_033981,NM_032270	chr1,chr1	-,+	FLJ27354,LRRC8C	-4150,-4011
chr1:177930772-177932563	chr1	+	177930832	177932370	True	NM_170692,NM_033127	chr1,chr1	+,-	RASAL2,SEC16B	130493,6745
chr6:78172406-78172782	chr6	+	78172405	78172759	True	NM_000863,NM_001010844	chr6,chr6	-,+	HTR1B,IRAK1BP1	411,1404429
chr14:55656368-55656871	chr14	+	55656372	55656883	True	NR_003225,NM_001146015,NM_014750	chr14,chr14,chr14	+,-,-	LGALS3,DLGAP5,DLGAP5	-52723,1564,1564
chr1:201392425-201392783	chr1	+	201392611	201392821	True	NM_003281,NR_026667	chr1,chr1	-,+	TNNI1,RPS10P7	-1737,96210
chr17:4609450-4610392	chr17	+	4609461	4610213	True	NM_004313,NM_199004,NM_014389	chr17,chr17,chr17	+,+,-	ARRB2,ARRB2,PELP1	3575,3575,-1829
chr5:180630870-180631114	chr5	+	180631012	180631120	True	NM_203295,NM_203294,NM_203297,NM_203296,NM_033342,NM_203293,NM_033549	chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,-,-,+	TRIM7,TRIM7,TRIM7,TRIM7,TRIM7,TRIM7,TRIM41	270,270,-3082,270,1107,1107,19185
chr16:3508782-3509842	chr16	+	3508984	3509880	True	NM_001083600,NM_024845,NM_152457	chr16,chr16,chr16	+,+,-	NAT15,NAT15,ZNF597	-1043,-1043,-15494
chr4:128882898-128884540	chr4	+	128883018	128884428	True	NM_001039717,NM_152778	chr4,chr4	+,-	C4orf29,MFSD8	2032,2768
chr11:2323973-2324808	chr11	+	2324127	2324691	True	NM_139022,NM_001142946,NR_024621	chr11,chr11,chr11	+,-,-	TSPAN32,C11orf21,C11orf21	-935,-984,-984
chr3:158392930-158394647	chr3	+	158393526	158394149	True	NM_024996,NM_020169	chr3,chr3	+,-	GFM1,LXN	-31268,-3044
chr4:87280840-87281367	chr4	+	87280946	87281397	True	NM_138982,NM_006264,NM_138980	chr4,chr4,chr4	-,+,-	MAPK10,PTPN13,MAPK10	28,234070,28
chr16:30442687-30442887	chr16	+	30442687	30442763	True	NM_024096,NM_016643	chr16,chr16	-,+	DCTPP1,ZNF771	-1314,-24005
chr21:14409814-14410028	chr21	+	14409890	14410002	True	NR_026916,NR_036164	chr21,chr21	+,-	ANKRD30BP2,MIR3156-3	484,368829
chr1:101361017-101361354	chr1	+	101361168	101361294	True	NM_001439,NM_133496,NM_001144884,NM_001033025	chr1,chr1,chr1,chr1	-,+,+,-	EXTL2,SLC30A7,SLC30A7,EXTL2	-750,339,337,-750
chr16:81039277-81040015	chr16	+	81039291	81039989	True	NM_020188,NM_001100624,NM_018455,NM_001100625	chr16,chr16,chr16,chr16	-,+,+,+	C16orf61,CENPN,CENPN,CENPN	563,113,113,113
chr16:14014217-14014447	chr16	+	14014257	14014317	True	NM_005236,NM_001134477	chr16,chr16	+,-	ERCC4,PARN	-294,709853
chr20:54934503-54934897	chr20	+	54934537	54934889	True	NM_003600,NM_080821	chr20,chr20	-,+	AURKA,C20orf108	32512,-605
chr17:61599754-61600151	chr17	+	61599954	61600162	True	NM_001915,NM_173092,NM_030779	chr17,chr17,chr17	-,+,+	CYB561,KCNH6,KCNH6	-76232,532,532
chr2:230784784-230785060	chr2	+	230784787	230785083	True	NM_174899,NM_004238	chr2,chr2	+,-	FBXO36,TRIP12	2123,1622
chr10:81893305-81894110	chr10	+	81893400	81893958	True	NM_001012973,NR_027432	chr10,chr10	+,-	PLAC9,LOC219347	-1193,-54451
chr11:107250641-107252530	chr11	+	107251088	107252411	True	NM_001130037,NM_152434	chr11,chr11	+,-	ELMOD1,CWF19L2	209405,76223
chrX:1510103-1510445	chrY	+	1460162	1460426	False	NM_001636,NR_026710,NR_026711	chrY,chrY,chrY	-,+,+	SLC25A6,ASMTL-AS1,ASMTL-AS1	663,8997,8997
chrX:1510103-1510445	chrX	+	1510162	1510426	True	NM_001636,NR_026710,NR_026711	chrX,chrX,chrX	-,+,+	SLC25A6,ASMTL-AS1,ASMTL-AS1	663,8997,8997
chr9:124501802-124502020	chr9	+	124501867	124502003	True	NR_003191,NM_138709	chr9,chr9	-,+	GGTA1,DAB2IP	-239561,3060
chr11:118118482-118118881	chr11	+	118118482	118118750	True	NM_198275,NM_000733	chr11,chr11	-,+	MPZL3,CD3E	4323,56544
chr11:442953-443253	chr11	+	443083	443259	True	NM_030783,NM_001012302	chr11,chr11	+,-	PTDSS2,ANO9	7020,-1072
chr10:104264002-104264301	chr10	+	104264040	104264240	True	NM_001178133,NM_005736,NM_016169	chr10,chr10,chr10	+,-,+	SUFU,ACTR1A,SUFU	-372,-1528,-372
chr8:130951703-130951943	chr8	+	130951831	130951893	True	NM_016623,NR_031613	chr8,chr8	-,+	FAM49B,MIR1208	157,-1789520
chr16:3658565-3659124	chr16	+	3658565	3659127	True	NM_005223,NM_032444	chr16,chr16	+,-	DNASE1,SLX4	43812,2508
chrX:105449826-105451053	chrX	+	105449908	105451090	True	NM_152423,NM_000354	chrX,chrX	+,-	MUM1L1,SERPINA7	-37668,-167190
chr11:57508543-57508969	chr11	+	57508568	57509016	True	NM_001145101,NM_170746	chr11,chr11	-,+	BTBD18,C11orf31	10287,-19
chr5:158687849-158688954	chr5	+	158687854	158688628	True	NM_001199380,NM_145049	chr5,chr5	-,+	RNF145,UBLCP1	-50793,1460
chr3:152554428-152555178	chr3	+	152554462	152555206	True	NM_002563,NM_001123228	chr3,chr3	+,-	P2RY1,TMEM14E	-1777,-495683
chr17:45898551-45898809	chr17	+	45898633	45898849	True	NM_145798,NM_033413	chr17,chr17	-,+	OSBPL7,LRRC46	348,10143
chr17:46969703-46970221	chr17	+	46969829	46969997	True	NM_005175,NM_001002027,NM_007241	chr17,chr17,chr17	+,+,-	ATP5G1,ATP5G1,SNF8	150,150,52207
chr15:63673085-63673593	chr15	+	63673158	63673620	True	NM_206925,NM_001218,NM_031301	chr15,chr15,chr15	-,-,+	CA12,CA12,APH1B	505,505,-103469
chr6:148661846-148662239	chr6	+	148661845	148662004	True	NR_034115,NM_015278	chr6,chr6	-,+	LOC729178,SASH1	-1136095,1724
chr7:5821426-5822682	chr7	+	5821553	5822605	True	NR_023382,NM_207111,NM_207116	chr7,chr7,chr7	+,-,-	ZNF815,RNF216,RNF216	40185,-192,-192
chr6:160910971-160911530	chr6	+	160911022	160911541	True	NR_028093,NM_021977	chr6,chr6	-,+	LPAL2,SLC22A3	20666,-141648
chr2:200818983-200819245	chr2	+	200819103	200819167	True	NM_001039693,NM_024520,NR_004862	chr2,chr2,chr2	-,+,-	C2orf60,C2orf47,C2orf60	1344,872,1344
chr21:42880724-42881015	chr21	+	42880766	42881050	True	NM_001178046,NM_001135099,NM_005656	chr21,chr21,chr21	+,-,-	MX1,TMPRSS2,TMPRSS2	-82715,-774,-681
chr20:41820377-41820796	chr20	+	41820385	41820755	True	NM_133170,NM_007050,NM_006275	chr20,chr20,chr20	-,-,+	PTPRT,PTPRT,SRSF6	-1828,-1828,265748
chr3:134515854-134516206	chr3	+	134515882	134516189	True	NM_178554,NM_004441	chr3,chr3	-,+	KY,EPHB1	-146018,-1834
chr16:30393231-30394600	chr16	+	30393250	30394222	True	NM_013292,NM_052838	chr16,chr16	+,-	MYLPF,SEPT1	-7179,-1
chr12:8396234-8396481	chr12	+	8396257	8396525	True	NR_024254,NR_026788	chr12,chr12	-,+	LOC653113,FAM66C	-715,-63503
chr3:93691834-93692612	chr3	+	93692004	93692544	True	NM_144996,NM_000313,NM_182896,NM_001174151,NM_001174150,NR_033427	chr3,chr3,chr3,chr3,chr3,chr3	+,-,+,+,+,+	ARL13B,PROS1,ARL13B,ARL13B,ARL13B,ARL13B	6438,440,6438,6438,6438,6438
chr6:36209170-36209881	chr6	+	36209351	36209793	True	NM_001010903,NM_001145716,NM_173676	chr6,chr6,chr6	-,+,+	C6orf222,PNPLA1,PNPLA1	94919,1186,1151
chr19:820678-821164	chr19	+	820962	821060	True	NM_001700,NM_024888,NR_036154	chr19,chr19,chr19	+,-,+	AZU1,LPPR3,MIR3187	6770,942,-7439
chr20:21494653-21495214	chr20	+	21494694	21495134	True	NM_002509,NM_006192	chr20,chr20	-,+	NKX2-2,PAX1	-30,191162
chr22:38006693-38008191	chr22	+	38006707	38007851	True	NM_001172688,NM_013365,NM_001172687,NM_006498,NM_001001561,NM_001001560	chr22,chr22,chr22,chr22,chr22,chr22	+,+,+,-,+,+	GGA1,GGA1,GGA1,LGALS2,GGA1,GGA1	-1712,-2278,-2278,-30683,-2278,-2278
chr20:13200456-13200683	chr20	+	13200460	13200694	True	NM_080826,NM_017714	chr20,chr20	+,-	ISM1,TASP1	1723,418939
chr4:77351504-77351730	chr4	+	77351558	77351707	True	NM_001042784,NM_020859	chr4,chr4	-,+	CCDC158,SHROOM3	-23100,4545
chr17:56160207-56160516	chr17	+	56160241	56160511	True	NR_034041,NM_080677	chr17,chr17	-,+	SRSF1,DYNLL2	-75534,268
chr2:113994995-113995488	chr2	+	113995001	113995489	True	NR_015377,NM_003466	chr2,chr2	+,-	LOC654433,PAX8	-1206,41059
chr15:76351731-76352027	chr15	+	76351744	76351842	True	NM_152335,NM_138573	chr15,chr15	+,-	C15orf27,NRG4	456,-46959
chr19:19049152-19050969	chr19	+	19049240	19050753	True	NM_004838,NR_027297,NM_001145722,NM_001145721,NR_033677,NM_001145724	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,+,-	HOMER3,HOMER3,HOMER3,HOMER3,DDX49,HOMER3	1338,51,410,458,-18807,-64
chr8:24349442-24350211	chr8	+	24349496	24350183	True	NM_003817,NM_006158	chr8,chr8	+,-	ADAM7,NEFL	-51038,463999
chr4:146853717-146855688	chr4	+	146854101	146855666	True	NM_007080,NM_178835	chr4,chr4	+,-	LSM6,ZNF827	241168,3991
chr3:132440796-132441026	chr3	+	132440798	132440946	True	NR_002811,NR_037804,NM_153240	chr3,chr3,chr3	+,-,-	NCRNA00119,NPHP3-ACAD11,NPHP3	239,407,407
chr8:134106575-134107305	chr8	+	134106787	134107142	True	NM_001045556,NM_001045557,NM_001204869	chr8,chr8,chr8	-,-,+	SLA,SLA,WISP1	8221,8221,96139
chr5:80684607-80686481	chr5	+	80684919	80686211	True	NM_032280,NM_130767	chr5,chr5	+,-	ZCCHC9,ACOT12	-87576,3838
chr1:46864500-46865271	chr1	+	46864686	46865312	True	NM_001441,NM_006369	chr1,chr1	+,-	FAAH,LRRC41	-4806,-95648
chr1:227924434-227926073	chr1	+	227924548	227925596	True	NR_024485,NM_053052,NR_024486,NM_001161465,NM_023007	chr1,chr1,chr1,chr1,chr1	+,+,+,-,-	LOC100130093,SNAP47,LOC100130093,JMJD4,JMJD4	-8359,-1902,-8359,-1436,-1436
chr1:59153007-59153394	chr1	+	59153011	59153414	True	NR_034014,NM_001085487	chr1,chr1	+,-	LOC100131060,MYSM1	97408,12383
chr7:141942611-141943195	chr7	+	141942649	141943193	True	NR_024346,NR_003717	chr7,chr7	-,+	MOXD2P,LOC100124692	3743,-71730
chr16:85929934-85931562	chr16	+	85929941	85931597	True	NM_002163,NM_006067	chr16,chr16	+,-	IRF8,COX4NB	1176,-96793
chr11:46723146-46724375	chr11	+	46723219	46724350	True	NM_004308,NM_001184751,NM_024741	chr11,chr11,chr11	-,+,+	ARHGAP1,ZNF408,ZNF408	-1099,-626,-953
chr12:80271589-80273517	chr12	+	80271627	80273496	True	NM_001143886,NM_173591	chr12,chr12	-,+	PPP1R12A,OTOGL	34245,329736
chr8:104384289-104384673	chr8	+	104384380	104384624	True	NM_138455,NM_030780	chr8,chr8	+,-	CTHRC1,SLC25A32	-645,42894
chr12:33593002-33593629	chr12	+	33593270	33593417	True	NM_198992,NM_032834	chr12,chr12	-,+	SYT10,ALG10	-516,581798
chr16:54965644-54965866	chr16	+	54965702	54965900	True	NM_005853,NR_034105,NR_034106	chr16,chr16,chr16	+,-,-	IRX5,CRNDE,CRNDE	-651,-2623,-3012
chr19:14048785-14049140	chr19	+	14049002	14049076	True	NM_138353,NM_024825	chr19,chr19	+,-	DCAF15,PODNL1	14242,263
chr19:58062785-58063887	chr19	+	58062966	58063864	True	NM_001039654,NM_153263	chr19,chr19	-,+	ZNF550,ZNF549	3911,-24324
chr2:96812459-96813185	chr2	+	96812586	96813024	True	NM_004418,NM_001037228,NM_001002036	chr2,chr2,chr2	-,+,-	DUSP2,LOC285033,ASTL	-1407,92952,-8411
chrX:151304344-151305806	chrX	+	151304725	151305781	True	NM_001204811,NM_001011550,NM_021048,NM_001011543	chrX,chrX,chrX,chrX	-,+,-,-	MAGEA10-MAGEA5,MAGEA4,MAGEA10,MAGEA10	1294,-218025,1294,1294
chr17:41400082-41400502	chr17	+	41400194	41400499	True	NR_027412,NM_145041	chr17,chr17	-,+	LOC100130581,TMEM106A	65818,-36351
chr6:25963964-25965129	chr6	+	25963968	25965015	True	NM_006355,NM_005835	chr6,chr6	+,-	TRIM38,SLC17A2	-948,-33022
chr17:65243938-65244974	chr17	+	65244143	65244815	True	NM_014877,NM_012417	chr17,chr17	-,+	HELZ,PITPNC1	-2824,129108
chr17:18428376-18429922	chr17	+	18428702	18429456	True	NR_026809,NR_003554,NM_001040078	chr17,chr17,chr17	-,-,+	FAM106A,LOC220594,LGALS9C	765,-4136,-48658
chr17:7380849-7381193	chr17	+	7380848	7381175	True	NM_000937,NM_020899,NM_001128833,NM_001102614	chr17,chr17,chr17,chr17	+,-,-,+	POLR2A,ZBTB4,ZBTB4,AMAC1L3	6522,6444,1820,3545
chr20:32899517-32899756	chr20	+	32899695	32899787	True	NM_031483,NM_001161766,NM_000687	chr20,chr20,chr20	+,-,-	ITCH,AHCY,AHCY	51274,-87,-8480
chrX:56258693-56259280	chrX	+	56258820	56259250	True	NM_007250,NM_001159296,NR_002308	chrX,chrX,chrX	+,+,-	KLF8,KLF8,LOC442454	-49,-1,504817
chr5:102590069-102591495	chr5	+	102590507	102591443	True	NM_033211,NM_017676	chr5,chr5	+,-	C5orf30,GIN1	2998,-134665
chr4:157862835-157864321	chr4	+	157862916	157864372	True	NM_000824,NM_016205	chr4,chr4	+,-	GLRB,PDGFC	132904,28226
chr19:29401815-29402847	chr19	+	29401939	29402741	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	53296,301445
chr7:130131482-130131946	chr7	+	130131651	130131945	True	NR_004382,NM_002402,NM_177525,NR_029899,NM_177524	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	MESTIT1,MEST,MEST,MIR335,MEST	-638,-2,-529,4006,-5656
chr14:95027528-95028056	chr14	+	95027659	95028017	True	NM_006215,NM_173850	chr14,chr14	+,-	SERPINA4,SERPINA12	31,-43478
chr19:49777797-49778984	chr19	+	49777987	49778782	True	NM_001040031,NR_036209	chr19,chr19	+,-	CD37,MIR4324	59894,33395
chr3:58522664-58522879	chr3	+	58522663	58522745	True	NM_003500,NM_153331	chr3,chr3	-,+	ACOX2,KCTD6	234,-38622
chr17:48797799-48798708	chr17	+	48797829	48798681	True	NM_052855,NM_016424,NM_006107	chr17,chr17,chr17	-,+,+	ANKRD40,LUC7L3,LUC7L3	-12559,-954,-954
chr10:18549900-18550224	chr10	+	18550043	18550273	True	NM_000724,NM_182543	chr10,chr10	+,-	CACNB2,NSUN6	-511,390327
chr16:4321658-4322003	chr16	+	4321703	4322001	True	NM_032575,NM_003223	chr16,chr16	+,-	GLIS2,TFAP4	60223,1050
chr16:50112926-50114410	chr16	+	50113127	50114121	True	NM_182922,NM_015069	chr16,chr16	+,-	HEATR3,ZNF423	-13305,-252209
chr17:62081526-62082504	chr17	+	62081533	62082503	True	NM_001164257,NM_000873,NM_001191031,NM_001191030,NM_001191029	chr17,chr17,chr17,chr17,chr17	+,-,+,+,+	C17orf72,ICAM2,C17orf72,C17orf72,C17orf72	-5880,1830,-5880,-5880,-5880
chr12:133707204-133707518	chr12	+	133707223	133707463	True	NM_015394,NM_001191054	chr12,chr12	+,-	ZNF10,LOC647589	-60,105015
chr12:79457820-79459019	chr12	+	79457822	79458842	True	NM_001135806,NM_002583	chr12,chr12	+,-	SYT1,PAWR	-18447,625998
chr15:74423396-74423598	chr15	+	74423541	74423613	True	NM_001130137,NM_001130136,NM_001130138,NR_027073,NM_020851	chr15,chr15,chr15,chr15,chr15	+,+,+,-,+	ISLR2,ISLR2,ISLR2,LOC283731,ISLR2	-1596,-1877,-1002,-1922,-849
chr5:157000608-157001536	chr5	+	157000904	157001336	True	NM_001145132,NM_033274	chr5,chr5	+,-	C5orf52,ADAM19	97224,1497
chr9:116222174-116222653	chr9	+	116222335	116222458	True	NM_017443,NM_017790	chr9,chr9	-,+	POLE3,RGS3	-49306,3550
chr10:10838677-10839199	chr10	+	10838677	10839245	True	NR_027082,NM_001025077	chr10,chr10	-,+	SFTA1P,CELF2	-1800,208013
chr4:3534717-3536159	chr4	+	3534802	3536186	True	NM_002337,NM_173660	chr4,chr4	-,+	LRPAP1,DOK7	-578,-69820
chr6:31720419-31721796	chr6_qbl_hap6	+	3014338	3015146	False	NR_037846,NM_001288	chr6_qbl_hap6,chr6_qbl_hap6	+,-	MSH5-C6ORF26,CLIC1	-13026,-16359
chr6:31720419-31721796	chr6_mcf_hap5	+	3100383	3101191	False	NM_001288,NM_001039651	chr6_mcf_hap5,chr6_mcf_hap5	-,+	CLIC1,C6orf26	-16355,9278
chr6:31720419-31721796	chr6_cox_hap2	+	3230288	3231096	False	NM_001288,NM_001039651	chr6_cox_hap2,chr6_cox_hap2	-,+	CLIC1,C6orf26	-16326,9262
chr6:31720419-31721796	chr6	+	31720694	31721502	True	NM_001288,NM_001039651	chr6,chr6	-,+	CLIC1,C6orf26	-16353,9270
chr6:31720419-31721796	chr6_dbb_hap3	+	3006272	3007080	False	NM_001288,NM_001039651	chr6_dbb_hap3,chr6_dbb_hap3	-,+	CLIC1,C6orf26	-16360,9274
chr20:54932154-54933860	chr20	+	54932371	54933749	True	NM_003600,NM_080821	chr20,chr20	-,+	AURKA,C20orf108	33652,233
chr12:58238190-58238574	chr12	+	58238229	58238559	True	NM_005730,NM_001172697	chr12,chr12	-,+	CTDSP2,TSFM	2238,-61752
chr3:52258357-52258815	chr3	+	52258532	52258806	True	NM_017442,NM_144641	chr3,chr3	-,+	TLR9,PPM1M	1423,21002
chr16:1276284-1276636	chr16	+	1276340	1276628	True	NM_012467,NM_024164,NM_003294	chr16,chr16,chr16	-,-,+	TPSG1,TPSB2,TPSAB1	-1086,3607,14049
chr16:1276284-1276636	chr16	-	1294356	1294550	False	NM_024164,NM_003294	chr16,chr16	-,+	TPSB2,TPSAB1	-14171,-3729
chr12:99491217-99492915	chr12	+	99491459	99492907	True	NM_181869,NM_020140	chr12,chr12	+,-	APAF1,ANKS1B	-452439,55720
chr11:13711513-13713434	chr11	+	13711981	13713381	True	NM_032228,NM_000315	chr11,chr11	+,-	FAR1,PTH	-21839,-194414
chr4:71387427-71388513	chr4	+	71387666	71388552	True	NM_144646,NM_212557	chr4,chr4	-,+	IGJ,AMTN	143846,-3420
chr5:766012-766410	chr5	+	766035	766297	True	NM_001166260,NM_007030	chr5,chr5	+,-	TRIP13,TPPP	126671,-72525
chr21:40120800-40121667	chr21	+	40120804	40121682	True	NR_027067,NM_005239	chr21,chr21	-,+	NCRNA00114,ETS2	2549,56166
chr1:153930820-153931038	chr1	+	153930860	153930956	True	NM_014437,NM_130898,NM_181715	chr1,chr1,chr1	-,+,-	SLC39A1,CREB3L4,CRTC2	9282,9440,226
chr5:68935564-68937300	chr5	+	68935918	68935988	True	NR_027439,NM_001042490	chr5,chr5	-,+	LOC100272216,GTF2H2D	-6890,-79895
chr5:68935564-68937300	chr5	+	70516008	70516078	False	NR_003922,NR_033968	chr5,chr5	+,-	PMCHL2,LOC100049076	155533,39094
chr5:68935564-68937300	chr5	+	69515644	69515714	False	NM_022877,NR_024054	chr5,chr5	+,-	SMN2,LOC100170939	-170345,5958
chr5:68935564-68937300	chr5	+	69790750	69790820	False	NR_033417,NR_033968	chr5,chr5	+,-	GTF2H2B,LOC100049076	-79604,60380
chr5:68935564-68937300	chr5	+	69812034	69812104	False	NR_033417,NR_033968	chr5,chr5	+,-	GTF2H2B,LOC100049076	-100888,39096
chr11:92083799-92085531	chr11	+	92084039	92085563	True	NM_152313,NM_001008781	chr11,chr11	-,+	SLC36A4,FAT3	845582,-43
chr6:167652495-167652717	chr6	+	167652496	167652734	True	NM_005299,NM_001143947	chr6,chr6	-,+	GPR31,UNC93A	-81177,52068
chr10:8904247-8905655	chr10	+	8904295	8905382	True	NM_002051,NR_024256	chr10,chr10	+,-	GATA3,FLJ45983	-807680,-808848
chr2:219847134-219847365	chr2	+	219847144	219847363	True	NR_015390,NM_017521,NR_024385	chr2,chr2,chr2	+,-,+	LOC151300,FEV,LOC151300	-6189,3066,-6189
chr20:23013761-23014980	chr20	+	23013777	23014927	True	NM_001052,NM_000361	chr20,chr20	+,-	SSTR4,THBD	1129,15425
chr2:222808893-222810873	chr2	+	222809008	222810753	True	NM_153038,NM_001127366	chr2,chr2	+,-	CCDC140,PAX3	352112,353012
chr1:33285586-33285905	chr1	+	33285586	33285698	True	NM_003680,NM_001017406,NM_022753	chr1,chr1,chr1	-,+,+	YARS,S100PBP,S100PBP	-1953,-2463,-2463
chr4:100736061-100736646	chr4	+	100736087	100736684	True	NM_021970,NM_014395	chr4,chr4	-,+	LAMTOR3,DAPP1	79069,1296
chr4:119757436-119758191	chr4	+	119757495	119758079	True	NM_001128933,NM_014822	chr4,chr4	+,-	SYNPO2,SEC24D	51916,-169
chrX:100488118-100489406	chrX	+	100488177	100489209	True	NM_001939,NM_001168474	chrX,chrX	+,-	DRP2,TAF7L	-13295,57166
chr6:139096365-139097867	chr6	+	139096431	139097414	True	NM_015439,NM_020464	chr6,chr6	+,-	CCDC28A,NHSL1	-1825,-202763
chr6:138508345-138508650	chr6	+	138508369	138508699	True	NM_021635,NM_020340	chr6,chr6	-,+	PBOV1,KIAA1244	30978,-25368
chr4:17782884-17783090	chr4	+	17782894	17782966	True	NM_015688,NM_022346	chr4,chr4	-,+	FAM184B,NCAPG	219,29558
chr2:106013970-106014602	chr2	+	106014055	106014647	True	NM_001450,NM_201555,NM_001039492,NM_024093	chr2,chr2,chr2,chr2	-,-,-,+	FHL2,FHL2,FHL2,C2orf49	1089,1089,983,-60100
chr12:53142406-53143141	chr12	+	53142432	53143078	True	NM_199187,NM_015848	chr12,chr12	+,-	KRT18,KRT76	199576,28101
chrX:119077781-119078364	chrX	+	119077791	119078214	True	NM_024528,NM_178813	chrX,chrX	-,+	NKAP,AKAP14	-56,-47906
chr16:58015507-58016653	chr16	+	58016023	58016659	True	NM_199456,NM_199046,NM_001135639	chr16,chr16,chr16	+,+,-	TEPP,TEPP,CNGB1	-5736,-5736,-11003
chr19:788368-788824	chr19	+	788694	788774	True	NM_024888,NM_175847,NM_031991,NM_031990,NM_002819	chr19,chr19,chr19,chr19,chr19	-,+,+,+,+	LPPR3,PTBP1,PTBP1,PTBP1,PTBP1	33228,8617,8617,8617,8617
chr8:9905368-9906901	chr8	+	9905553	9906922	True	NM_001135670,NR_029668,NM_012331	chr8,chr8,chr8	+,-,+	MSRA,MIR124-1,MSRA	4907,-144571,4907
chr5:729216-729548	chr5	+	729274	729400	True	NM_018140,NM_007030	chr5,chr5	+,-	CEP72,TPPP	-116920,-35764
chr5:729216-729548	chr5	+	813601	813727	False	NM_001166260,NM_024786	chr5,chr5	+,-	TRIP13,ZDHHC11	79241,37424
chr19:14247431-14247673	chr19	+	14247535	14247673	True	NR_024282,NM_018154	chr19,chr19	+,-	LOC113230,ASF1B	-63765,-95
chr20:30795910-30796230	chr20	+	30795916	30796276	True	NM_015352,NM_172236,NM_002657	chr20,chr20,chr20	+,+,-	POFUT1,POFUT1,PLAGL2	-271,-271,-370
chr16:34404853-34405566	chr16	+	34405089	34405611	True	NR_027080,NR_002837	chr16,chr16	+,-	LOC283914,UBE2MP1	192175,-327
chr11:10585797-10587747	chr11	+	10585892	10587198	True	NM_006691,NR_034093	chr11,chr11	-,+	LYVE1,LOC100129827	3217,-23113
chr4:74718949-74719227	chr4	+	74719034	74719186	True	NM_002620,NM_002619	chr4,chr4	+,-	PF4V1,PF4	-72,128579
chr19:33791338-33791985	chr19	+	33791356	33791997	True	NR_026887,NM_004364	chr19,chr19	+,-	LOC80054,CEBPA	1765,1483
chr14:73925187-73925404	chr14	+	73925276	73925392	True	NM_003744,NM_001005745,NM_001005744,NM_001005743,NM_024644	chr14,chr14,chr14,chr14,chr14	-,-,-,-,+	NUMB,NUMB,NUMB,NUMB,C14orf169	4,4,4,4,32251
chr9:99329729-99330101	chr9	+	99329731	99330072	True	NM_001077181,NM_014282	chr9,chr9	-,+	CDC14B,HABP4	-528,-117368
chr6:89823408-89824606	chr6	+	89823680	89824438	True	NM_001010853,NM_080743	chr6,chr6	+,-	PM20D2,SRSF12	31330,3412
chr16:67385004-67385329	chr16	+	67385009	67385241	True	NM_001100915,NM_001161575	chr16,chr16	-,+	KCTD19,LRRC36	-24348,-3802
chr2:233924158-233924799	chr2	+	233924282	233924812	True	NM_001017915,NM_005541,NM_019850	chr2,chr2,chr2	+,+,-	INPP5D,INPP5D,NGEF	223,223,-46331
chrX:35818085-35819269	chrX	+	35818085	35819272	True	NM_001099921,NM_031442	chrX,chrX	+,-	MAGEB16,TMEM47	-1678,-1142680
chr15:96872396-96873278	chr15	+	96872483	96873303	True	NR_031715,NR_034095,NM_001145155,NM_001145157,NM_001145156,NM_021005	chr15,chr15,chr15,chr15,chr15,chr15	+,-,+,+,+,+	MIR1469,LOC400456,NR2F2,NR2F2,NR2F2,NR2F2	3186,-1002154,-3388,3265,2490,807
chr7:35695626-35697237	chr7	+	35695932	35696604	True	NM_022373,NM_001011553	chr7,chr7	-,+	HERPUD2,SEPT7	38227,144022
chr5:141385384-141385870	chr5	+	141385383	141385889	True	NM_005471,NM_183401	chr5,chr5	-,+	GNPDA1,RNF14	6781,-36733
chr9:112085941-112086863	chr9	+	112086025	112086655	True	NM_018424,NM_019114,NM_001037293	chr9,chr9,chr9	-,-,+	EPB41L4B,EPB41L4B,PALM2	-3004,-3004,316412
chr20:31407234-31407530	chr20	+	31407286	31407562	True	NM_012325,NM_053041	chr20,chr20	+,-	MAPRE1,COMMD7	136,-75472
chr20:18294459-18295597	chr20	+	18294836	18295632	True	NM_003434,NM_001099407	chr20,chr20	+,-	ZNF133,C20orf12	-25769,152247
chr2:3643597-3644688	chr2	+	3643627	3644687	True	NM_199235,NM_002936,NM_024027	chr2,chr2,chr2	+,-,+	COLEC11,RNASEH1,COLEC11	-1041,-37687,-1041
chr20:62478905-62479184	chr20	+	62479025	62479199	True	NM_080622,NM_025224	chr20,chr20	+,-	ABHD16B,ZBTB46	13366,-42169
chr1:21056695-21057140	chr1	+	21056701	21057126	True	NM_001103160,NM_001103161,NM_032409	chr1,chr1,chr1	-,-,+	SH2D5,SH2D5,PINK1	2057,2057,-96804
chr9:109626501-109627047	chr9	+	109626553	109626921	True	NR_031752,NM_021224	chr9,chr9	-,+	MIR548Q,ZNF462	221845,-1226
chr17:40338928-40340588	chr17	+	40339414	40340387	True	NR_024573,NM_012285,NM_033194,NM_032484,NM_001524,NM_001142622,NM_001142623	chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,-,-,-,-	GHDC,KCNH4,HSPB9,GHDC,HCRT,GHDC,GHDC	5918,-6118,-64709,6213,-1944,6213,6213
chr16:90040921-90041521	chr16	+	90041105	90041559	True	NR_003227,NR_003226,NR_003228,NM_145039	chr16,chr16,chr16,chr16	+,+,+,-	AFG3L1P,AFG3L1P,AFG3L1P,CENPBD1	-2168,-2168,-2168,-1865
chr17:9808077-9808372	chr17	+	9808109	9808313	True	NM_004246,NM_002903	chr17,chr17	+,-	GLP2R,RCVRN	-78779,421
chr2:100105280-100105710	chr2	+	100105312	100105726	True	NM_015904,NM_001037872,NM_016316	chr2,chr2,chr2	+,-,-	EIF5B,REV1,REV1	-151540,804,804
chr1:171076933-171077372	chr1	+	171076937	171077421	True	NR_031627,NM_006894	chr1,chr1	-,+	MIR1295,FMO3	-5990,-16974
chr10:102733826-102735468	chr10	+	102733850	102735275	True	NR_030339,NM_176792,NM_001203244,NM_017893	chr10,chr10,chr10,chr10	+,-,+,+	MIR608,MRPL43,SEMA4G,SEMA4G	-72,12047,-1615,-1615
chr17:25621705-25622947	chr17	+	25621870	25622545	True	NM_015626,NM_000625,NM_134265	chr17,chr17,chr17	+,-,+	WSB1,NOS2,WSB1	-815,505062,-815
chr12:10339793-10340620	chr12	+	10340317	10340389	True	NM_153022,NM_002543	chr12,chr12	+,-	C12orf59,OLR1	-8811,-15527
chr16:1523465-1523939	chr16	+	1523661	1523791	True	NM_001287,NM_001114331,NM_016111	chr16,chr16,chr16	-,-,+	CLCN7,CLCN7,TELO2	1350,1350,19560
chrX:53712954-53713163	chrX	+	53712953	53713173	True	NM_031407,NM_001031745	chrX,chrX	-,+	HUWE1,RIBC1	550,-263122
chr1:147246847-147247087	chr1	+	147246848	147247032	True	NM_005266,NM_005267	chr1,chr1	-,+	GJA5,GJA8	-1364,127913
chr2:74874388-74874740	chr2	+	74874423	74874745	True	NM_138804,NM_004263	chr2,chr2	-,+	C2orf65,SEMA4F	470,6647
chr9:98634411-98635313	chr9	+	98634634	98635283	True	NM_001010895,NR_023390,NR_023389	chr9,chr9,chr9	+,-,-	C9orf102,C9orf130,C9orf130	2616,3043,3043
chr3:141203938-141205588	chr3	+	141204436	141205573	True	NM_006506,NM_001178140	chr3,chr3	+,-	RASA2,TFDP2	352,513706
chr16:87798081-87798734	chr16	+	87798332	87798693	True	NM_020655,NM_001184856,NM_017566,NM_001184854	chr16,chr16,chr16,chr16	+,-,-,-	JPH3,KLHDC4,KLHDC4,KLHDC4	-161884,955,955,955
chr11:111488198-111489062	chr11	+	111488229	111488801	True	NM_015191,NM_017589	chr11,chr11	+,-	SIK2,BTG4	-15123,-105165
chr11:121158581-121159844	chr11	+	121158891	121159872	True	NR_029671,NM_001024956,NM_006918	chr11,chr11,chr11	-,+,+	MIR125B1,SC5DL,SC5DL	810730,3704,3515
chrY:6779922-6780591	chrY	+	6779947	6780481	True	NM_001143,NM_134259,NM_134258,NM_033284	chrY,chrY,chrY,chrY	-,+,+,+	AMELY,TBL1Y,TBL1Y,TBL1Y	-37879,-1271,-1271,-1271
chr14:89292970-89293360	chr14	+	89293132	89293289	True	NM_183387,NM_144596,NM_198310,NM_198309	chr14,chr14,chr14,chr14	-,+,+,+	EML5,TTC8,TTC8,TTC8	-34036,-2208,-2208,-2208
chr9:38393174-38394025	chr9	+	38393206	38393717	True	NM_001007563,NM_000692	chr9,chr9	-,+	IGFBPL1,ALDH1B1	30777,-555
chr16:87739713-87740052	chr16	+	87739834	87740088	True	NM_020655,NM_001184854	chr16,chr16	+,-	JPH3,KLHDC4	-103386,59560
chr22:19931020-19931530	chr22	+	19931218	19931556	True	NM_006440,NM_001135161,NM_000754,NM_001135162	chr22,chr22,chr22,chr22	-,+,+,+	TXNRD2,COMT,COMT,COMT	-1859,6903,-2006,7488
chr19:55889374-55889579	chr19	+	55889375	55889489	True	NM_139172,NM_000991,NM_001190764,NM_000641,NM_001136135,NM_001136134,NM_001136137,NM_001136136	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,-,-,+,+,+,+	TMEM190,RPL28,LOC388564,IL11,RPL28,RPL28,RPL28,RPL28	-1222,7810,6188,-7561,7810,7810,7810,7810
chr7:44241053-44242851	chr7	+	44241068	44242611	True	NM_006555,NM_000162	chr7,chr7	+,-	YKT6,GCK	-541,-12046
chr4:49511403-49512478	chr4	+	49511895	49512522	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-523688,-603080
chr2:27992572-27993325	chr2	+	27992706	27993350	True	NM_014860,NM_004891,NM_145330	chr2,chr2,chr2	-,+,+	SUPT7L,MRPL33,MRPL33	-106257,1233,1233
chr17:7482004-7483735	chr17	+	7482440	7483777	True	NM_001416,NR_002918,NM_004870,NM_001040059,NR_002912,NR_024603,NR_002604,NM_001251,NM_001204510,NM_006942	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,+,+,+,+,-	EIF4A1,SNORA48,MPDU1,CD68,SNORA67,MPDU1,SNORD10,CD68,EIF4A1,SOX15	-6467,-4460,3187,34,-1218,3187,-2362,33,-6467,9761
chr4:76599773-76599997	chr4	+	76599773	76599874	True	NM_203505,NM_203504,NM_012297,NM_003715	chr4,chr4,chr4,chr4	-,-,-,+	G3BP2,G3BP2,G3BP2,USO1	-1106,-1106,-1430,49954
chr16:11764226-11764626	chr16	+	11764356	11764570	True	NM_003498,NM_015914	chr16,chr16	+,-	SNN,TXNDC11	-2118,72128
chr14:55740682-55742252	chr14	+	55740876	55742229	True	NM_152231,NM_014750,NM_017943	chr14,chr14,chr14	+,-,+	FBXO34,DLGAP5,FBXO34	-2055,-82480,-2906
chr13:48606796-48608347	chr13	+	48606848	48607908	True	NM_003850,NM_018283	chr13,chr13	-,+	SUCLA2,NUDT15	-31386,3794
chr8:67089621-67089959	chr8	+	67089771	67089993	True	NM_000756,NM_184087	chr8,chr8	-,+	CRH,TRIM55	903,-50544
chr11:78267986-78269472	chr11	+	78267986	78269495	True	NM_024678,NM_020798	chr11,chr11	-,+	NARS2,USP35	16471,-368179
chr10:99161146-99161851	chr10	+	99161182	99161314	True	NM_015179,NM_001145114,NM_002629	chr10,chr10,chr10	-,-,+	RRP12,RRP12,PGAM1	-55,-55,24712
chr21:38364982-38365306	chr21	+	38365004	38365311	True	NM_000411,NM_018962	chr21,chr21	-,+	HLCS,DSCR6	-2468,13551
chrX:47489027-47490388	chrX	+	47489267	47490100	True	NM_001145252,NM_002621,NR_028119	chrX,chrX,chrX	-,-,+	CFP,CFP,LOC100133957	102,33,28131
chr10:50603951-50604477	chr10	+	50604143	50604464	True	NM_001080520,NM_199459	chr10,chr10	-,+	DRGX,C10orf71	-4236,-97007
chr17:56834359-56835655	chr17	+	56834385	56835462	True	NM_014906,NM_198393	chr17,chr17	+,-	PPM1E,TEX14	-1204,-64969
chr3:46755914-46756421	chr3	+	46755913	46756411	True	NM_013270,NM_147196	chr3,chr3	-,+	PRSS50,TMIE	3012,-13141
chr10:65281987-65283470	chr10	+	65282249	65283123	True	NM_032776,NM_001001330	chr10,chr10	-,+	JMJD1C,REEP3	-56527,-1185
chr9:136022711-136022994	chr9	+	136022711	136022973	True	NR_001275,NM_001042368	chr9,chr9	+,-	CELP,RALGDS	-64836,1665
chr5:35229906-35230164	chr5	+	35229971	35230093	True	NM_194283,NM_000949	chr5,chr5	+,-	DNAJC21,PRLR	-300337,780
chr14:55035023-55035244	chr14	+	55035045	55035279	True	NM_004124,NM_015589,NM_001161576	chr14,chr14,chr14	-,+,+	GMFB,SAMD4A,SAMD4A	-79301,-459,-459
chr13:19809403-19809762	chr13	+	19809609	19809803	True	NM_006001,NR_034026	chr13,chr13	-,+	TUBA3C,LOC100287114	-53617,109385
chr4:157851950-157853884	chr4	+	157852210	157853467	True	NM_000824,NM_016205	chr4,chr4	+,-	GLRB,PDGFC	143809,39136
chr1:187518642-187519457	chr1	+	187518679	187519425	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-869120,-720699
chr22:20120971-20121655	chr22	+	20121418	20121654	True	NM_001185024,NM_013373,NM_182984	chr22,chr22,chr22	+,+,-	ZDHHC8,ZDHHC8,TRMT2A	-2105,-2105,-16650
chr9:125874476-125874953	chr9	+	125874621	125874931	True	NR_030331,NM_005294,NR_026677	chr9,chr9,chr9	-,+,-	MIR600,GPR21,NCRNA00287	-699,-77826,2875
chr3:77147336-77147718	chr3	+	77147369	77147676	True	NM_001128929,NM_001128223	chr3,chr3	+,-	ROBO2,ZNF717	-257,-1313114
chr19:38001892-38002302	chr19	+	38001915	38002308	True	NM_001013659,NM_152484	chr19,chr19	+,-	ZNF793,ZNF569	-4137,-43576
chr12:6981828-6982382	chr12	+	6981864	6982172	True	NM_032641,NM_000365,NM_001146316,NR_027483,NM_001159287	chr12,chr12,chr12,chr12,chr12	-,+,-,+,+	SPSB2,TPI1,SPSB2,TPI1,TPI1	399,-5222,327,-4637,-5331
chr1:8383119-8383917	chr1	+	8383202	8383782	True	NM_001042682,NM_001080397	chr1,chr1	-,+	RERE,SLC45A1	100016,607
chr9:35604276-35604656	chr9	+	35604289	35604671	True	NM_001782,NM_006285	chr9,chr9	-,+	CD72,TESK1	13803,609
chr22:45071052-45072125	chr22	+	45071281	45071935	True	NM_032287,NM_001198721,NM_001017528,NM_001017529,NM_001017530,NM_015366	chr22,chr22,chr22,chr22,chr22,chr22	-,+,+,+,+,+	LDOC1L,PRR5,PRR5,PRR5,PRR5,PRR5	-177276,752,-6905,-6905,752,752
chr11:64085530-64085748	chr11	+	64085684	64085744	True	NM_181652,NM_012094,NM_016404,NM_181651	chr11,chr11,chr11,chr11	+,+,-,+	PRDX5,PRDX5,TRMT112,PRDX5	-166,-166,-651,-166
chr4:122854139-122854403	chr4	+	122854179	122854445	True	NM_003305,NM_005033	chr4,chr4	-,+	TRPC3,EXOSC9	21,-131758
chr12:50304293-50305306	chr12	+	50304534	50305289	True	NM_000486,NM_012306,NR_026948	chr12,chr12,chr12	+,-,-	AQP2,FAIM2,LOC283332	39234,-6774,408
chr4:111560756-111562165	chr4	+	111560897	111562088	True	NM_153426,NM_153427,NM_001977,NM_001204399,NM_001204398,NM_001204397	chr4,chr4,chr4,chr4,chr4,chr4	-,-,+,-,-,-	PITX2,PITX2,ENPEP,PITX2,PITX2,PITX2	1252,1252,-163719,1252,1252,1252
chrX:153845325-153846409	chrX	+	153845455	153846437	True	NM_139250,NM_001327	chrX,chrX	-,-	CTAG1A,CTAG1B	1135,1135
chrX:153845325-153846409	chrX	+	153880117	153880479	False	NM_172377,NM_020994,NM_139250	chrX,chrX,chrX	-,-,+	CTAG2,CTAG2,CTAG1A	1424,1424,-66750
chrX:153845325-153846409	chrX	-	153814502	153815484	False	NM_139250,NM_001327	chrX,chrX	+,+	CTAG1A,CTAG1B	-1135,-1135
chr1:20126647-20127256	chr1	+	20126839	20127161	True	NM_015207,NM_181719	chr1,chr1	+,-	OTUD3,TMCO4	81726,-429
chr4:684057-684795	chr4	+	684092	684802	True	NM_002477,NM_032219	chr4,chr4	+,-	MYL5,MFSD7	-12432,-1119
chrX:153924413-153925359	chrX	+	153924515	153925355	True	NM_172377,NM_001142463	chrX,chrX	-,+	CTAG2,DKC1	-42662,65675
chr10:126634178-126634651	chr10	+	126634177	126634695	True	NM_022802,NM_017580	chr10,chr10	-,+	CTBP2,ZRANB1	81815,-3543
chr1:10274438-10275527	chr1	+	10274922	10275124	True	NM_015074,NM_004401,NM_183416	chr1,chr1,chr1	+,-,+	KIF1B,DFFA,KIF1B	-4217,257547,-4217
chr2:38303834-38304079	chr2	+	38303886	38304112	True	NR_027252,NM_000104	chr2,chr2	+,-	C2orf58,CYP1B1	54134,-563
chr5:177581504-177581769	chr5	+	177581568	177581764	True	NM_022762,NM_017838,NM_001034833	chr5,chr5,chr5	+,-,-	RMND5B,NHP2,NHP2	-23591,-607,-607
chr3:122103228-122104127	chr3	+	122103239	122104140	True	NM_014367,NM_001017928	chr3,chr3	+,-	FAM162A,CCDC58	-267,-1165
chr12:45251259-45252491	chr12	+	45251333	45252461	True	NM_001145109,NM_001025356	chr12,chr12	-,+	NELL2,ANO6	17043,357308
chr6:15077653-15078052	chr6	+	15077658	15077810	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	168716,585541
chr1:145473081-145473293	chr1	+	145473086	145473234	True	NM_001039888,NM_032305,NM_153713	chr1,chr1,chr1	+,-,+	ANKRD34A,POLR3GL,LIX1L	-2629,-2699,3850
chr9:99966885-99967526	chr9	+	99967089	99967448	True	NM_199005,NR_036526	chr9,chr9	-,+	ZNF322B,LOC100499484	-5179,33259
chr22:23743438-23744068	chr22	+	23743474	23744086	True	NR_033408,NR_003950	chr22,chr22	+,-	FBXW4P1,ZDHHC8P1	-138571,763
chr15:34779712-34780258	chr10	+	50936308	50936373	False	NM_001143996,NM_182554	chr10,chr10	-,+	OGDHL,C10orf53	34117,-48690
chr15:34779712-34780258	chr15	+	34779895	34780037	True	NM_175741,NR_036050	chr15,chr15	+,-	C15orf55,MIR1233-1	-141891,40589
chr14:60713297-60714067	chr14	+	60713522	60714076	True	NM_177951,NM_177952,NM_016029,NM_021003	chr14,chr14,chr14,chr14	+,+,-,+	PPM1A,PPM1A,DHRS7,PPM1A	1889,-1112,-81311,1889
chr4:3318820-3319022	chr4	+	3318822	3319020	True	NM_002926,NM_198229,NM_002337	chr4,chr4,chr4	+,+,-	RGS12,RGS12,LRPAP1	-2999,-2999,215254
chr11:64807768-64808240	chr11	+	64807784	64808267	True	NM_005468,NM_013299	chr11,chr11	-,+	NAALADL1,SAC3D1	17792,108
chr15:42121785-42122525	chr15	+	42121895	42122557	True	NR_036195,NM_001198588,NM_001114632,NM_001114633,NM_005090	chr15,chr15,chr15,chr15,chr15	-,+,+,+,+	MIR4310,JMJD7-PLA2G4B,JMJD7,PLA2G4B,JMJD7-PLA2G4B	36242,-1668,-1668,8453,-1668
chr12:8282522-8283269	chr12	+	8282650	8282868	True	NM_016184,NM_194448,NM_194450,NM_194447,NR_036440	chr12,chr12,chr12,chr12,chr12	+,+,+,+,-	CLEC4A,CLEC4A,CLEC4A,CLEC4A,POU5F1P3	-6473,-6473,-6473,-6473,4636
chr2:36588582-36589206	chr2	+	36588804	36589071	True	NR_037631,NM_016441	chr2,chr2	-,+	LOC100288911,CRIM1	-6091,-5485
chr18:33078654-33079710	chr18	+	33078653	33079702	True	NM_001098817,NM_020474,NM_194281	chr18,chr18,chr18	-,+,-	INO80C,GALNT1,INO80C	-698,154830,-698
chr3:123286997-123288502	chr3	+	123287029	123288551	True	NM_198402,NM_012430	chr3,chr3	-,+	PTPLB,SEC22A	15423,-366306
chr10:114712257-114712464	chr10	+	114712256	114712480	True	NM_030756,NM_001146283,NM_001198531,NM_001198530,NM_001146284,NM_001146285,NM_001146286,NM_001198526,NM_001198527,NM_001198525,NM_022494,NM_001198528,NM_001198529,NM_001146274	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,+,+,+,+,+,-,+,+,+	TCF7L2,TCF7L2,TCF7L2,TCF7L2,TCF7L2,TCF7L2,TCF7L2,TCF7L2,TCF7L2,TCF7L2,ZDHHC6,TCF7L2,TCF7L2,TCF7L2	-2298,-2298,-2298,-2298,-2298,-2298,-2298,-2298,-2298,-2298,-505584,-2298,-2298,-2298
chr19:1238841-1239262	chr19	+	1238918	1239164	True	NM_001001975,NM_177401,NM_001687,NM_152769	chr19,chr19,chr19,chr19	+,+,+,-	ATP5D,MIDN,ATP5D,C19orf26	2584,9387,2584,-928
chr12:70637149-70637349	chr12	+	70637204	70637298	True	NR_037615,NM_014515,NM_002837,NM_001199303,NM_001199302	chr12,chr12,chr12,chr12,chr12	+,+,-,+,+	CNOT2,CNOT2,PTPRB,CNOT2,CNOT2	195,-481,366376,195,-445
chr6:74018511-74019199	chr6	+	74018875	74019237	True	NM_001017361,NR_027005	chr6,chr6	+,-	C6orf221,C6orf147	53162,901
chr17:36613659-36614258	chr17	+	36613679	36614122	True	NM_001004334,NM_001199417	chr17,chr17	-,+	GPR179,ARHGAP23	-113986,-29010
chr13:48567154-48568024	chr13	+	48567484	48567892	True	NM_003850,NM_018283	chr13,chr13	-,+	SUCLA2,NUDT15	7620,43810
chr1:223538128-223538332	chr1	+	223538128	223538328	True	NM_017982,NM_152610,NM_001037175	chr1,chr1,chr1	-,+,-	SUSD4,C1orf65,SUSD4	-584,28386,-584
chr7:82759653-82760788	chr7	+	82760135	82760806	True	NM_033026,NM_001127444	chr7,chr7	-,+	PCLO,CD36	31443,-2484438
chr19:16287863-16288893	chr19	+	16288286	16288653	True	NM_014077,NM_054113	chr19,chr19	+,-	FAM32A,CIB3	7581,-4000
chr13:96298067-96298318	chr13	+	96298276	96298352	True	NM_006260,NM_198968,NM_014934	chr13,chr13,chr13	+,-,-	DNAJC3,DZIP1,DZIP1	31040,-1319,-1319
chr12:120033932-120034387	chr12	+	120033945	120034223	True	NR_031589,NM_001136534	chr12,chr12	-,+	MIR1178,TMEM233	117356,-2732
chr22:32880736-32881081	chr22	+	32880745	32881101	True	NM_174932,NM_001033024	chr22,chr22	-,+	BPIL2,FBXO7	-27372,-9585
chr3:141728408-141729092	chr3	+	141728643	141729149	True	NM_001178140,NM_001679	chr3,chr3	-,+	TFDP2,ATP1B3	-9414,-133234
chr2:97003449-97004707	chr2	+	97003609	97004535	True	NM_014014,NM_015341	chr2,chr2	-,+	SNRNP200,NCAPH	-32302,-2183
chr16:11439897-11440275	chr16	+	11439924	11440106	True	NM_152308,NM_002761	chr16,chr16	+,-	C16orf75,PRM1	-665,-64732
chr22:17566987-17567736	chr22	+	17567211	17567759	True	NM_031890,NM_014339	chr22,chr22	-,+	CECR6,IL17RA	34504,-1417
chr15:34394778-34394997	chr15	+	34394844	34395034	True	NM_152595,NM_020154	chr15,chr15	+,-	PGBD4,C15orf24	-623,-791
chr1:31409480-31409767	chr1	+	31409490	31409726	True	NR_033295,NR_004054,NR_002762	chr1,chr1,chr1	-,-,+	SNORD103B,SNORD103A,PRO0611	-867,-867,51185
chr4:8581417-8582285	chr4	+	8581617	8582235	True	NM_003501,NM_080819	chr4,chr4	-,+	ACOX3,GPR78	-139165,55
chr8:17940149-17941148	chr8	+	17940207	17941161	True	NM_177924,NM_001127505,NM_004315,NM_001160179	chr8,chr8,chr8,chr8	-,-,-,+	ASAH1,ASAH1,ASAH1,NAT1	768,1396,1396,86809
chr9:136325981-136326999	chr9	+	136326203	136326989	True	NM_017586,NM_001145099,NM_001135775	chr9,chr9,chr9	+,-,+	C9orf7,SLC2A6,C9orf7	-1167,17337,-1167
chr11:102220757-102221304	chr11	+	102220776	102221326	True	NM_001166,NM_052932	chr11,chr11	+,-	BIRC2,TMEM123	-2868,102499
chr14:32546328-32546592	chr14	+	32546471	32546539	True	NM_001030055,NM_001173,NR_027263	chr14,chr14,chr14	+,+,-	ARHGAP5,ARHGAP5,C14orf128	-27,-27,-566
chr19:50401162-50401432	chr19	+	50401229	50401303	True	NM_152899,NM_024682	chr19,chr19	-,+	IL4I1,TBC1D17	-1082,-20598
chr1:46149170-46149645	chr1	+	46149169	46149373	True	NM_021639,NM_016486	chr1,chr1	-,+	GPBP1L1,TMEM69	2979,4473
chr10:43933792-43934409	chr10	+	43934047	43934267	True	NR_026693,NM_001098204	chr10,chr10	+,-	ZNF487P,HNRNPF	-1524,-29351
chr10:135160850-135161178	chr10	+	135160850	135160912	True	NM_001145201,NM_015722,NM_145202	chr10,chr10,chr10	+,-,+	PRAP1,CALY,PRAP1	-57,-10375,-57
chr7:91878360-91878754	chr7	+	91878492	91878764	True	NM_019004,NM_004912,NM_194456,NM_194454,NM_194455,NM_001013406	chr7,chr7,chr7,chr7,chr7,chr7	+,-,-,-,-,-	ANKIB1,KRIT1,KRIT1,KRIT1,KRIT1,KRIT1	-2995,-3280,-3078,-3264,-3078,-3264
chr22:50766411-50768043	chr22	+	50766495	50768043	True	NM_001001794,NM_014678	chr22,chr22	-,+	FAM116B,PPP6R2	-1006,13716
chr17:4936379-4937147	chr17	+	4936392	4936931	True	NM_006612,NM_001104577,NM_017986	chr17,chr17,chr17	+,-,-	KIF1C,GPR172B,GPR172B	-35200,1846,1846
chr6:12292652-12293252	chr6	+	12292717	12293278	True	NM_001168319,NM_032744,NM_001955	chr6,chr6,chr6	+,-,+	EDN1,C6orf105,EDN1	-2239,-513437,-2239
chr15:42449441-42451258	chr15	+	42449611	42451079	True	NM_198141,NM_213600,NR_033151	chr15,chr15,chr15	+,-,-	GANC,PLA2G4F,PLA2G4F	115286,-772,-772
chr1:187039672-187040837	chr1	+	187039743	187040885	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-390184,-241778
chr1:223315764-223316284	chr1	+	223315903	223316271	True	NM_003268,NM_152610	chr1,chr1	-,+	TLR5,C1orf65	403,250443
chr2:55845157-55846792	chr2	+	55845186	55846734	True	NM_080667,NM_020463,NM_001122964	chr2,chr2,chr2	+,-,-	CCDC104,SMEK2,SMEK2	-98497,-390,-390
chr1:22777874-22778235	chr1	+	22778181	22778241	True	NM_014870,NM_030761,NM_001083621	chr1,chr1,chr1	+,-,+	ZBTB40,WNT4,ZBTB40	102,-308662,102
chrX:7897347-7898538	chrX	+	7897517	7898421	True	NM_001142389,NM_001172672,NM_013452,NM_004650	chrX,chrX,chrX,chrX	-,-,+,-	PNPLA4,PNPLA4,VCX,PNPLA4	-1737,-1737,-87272,-2042
chr14:70345550-70345868	chr14	+	70345561	70345868	True	NM_001034852,NM_003049,NM_022137	chr14,chr14,chr14	+,-,+	SMOC1,SLC10A1,SMOC1	245,-81555,245
chr22:29701363-29701761	chr22	+	29701457	29701651	True	NM_006478,NM_152236,NM_152237,NM_001007279	chr22,chr22,chr22,chr22	+,+,+,-	GAS2L1,GAS2L1,GAS2L1,RASL10A	1345,1345,1345,10147
chr1:230846555-230847380	chr1	+	230846613	230847291	True	NM_000029,NM_006615	chr1,chr1	-,+	AGT,CAPN9	3095,35838
chr12:56757093-56757385	chr12	+	56757214	56757422	True	NM_198332,NM_005419,NM_016584,NM_001638	chr12,chr12,chr12,chr12	-,-,+,-	STAT2,STAT2,IL23A,APOF	-3177,-3177,-24605,-631
chr6:10420916-10421440	chr6	+	10420917	10421410	True	NM_001032280,NM_003220,NM_001042425,NR_033910	chr6,chr6,chr6,chr6	-,-,-,+	TFAP2A,TFAP2A,TFAP2A,LOC100130275	-8310,-5447,-1120,-8418
chr19:45658498-45658895	chr19	+	45658595	45658845	True	NM_212550,NM_198478	chr19,chr19	+,-	BLOC1S3,NKPD1	23157,4613
chr16:46920416-46920877	chr16	+	46920444	46920854	True	NM_133443,NM_001142466,NM_001001436	chr16,chr16,chr16	+,+,-	GPT2,GPT2,C16orf87	-2187,-1393,-55370
chr11:58940962-58941326	chr11	+	58941097	58941357	True	NM_001039396,NM_015177	chr11,chr11	-,+	MPEG1,DTX4	39187,-1336
chr14:103991398-103992334	chr14	+	103991725	103992315	True	NM_152307,NM_001823	chr14,chr14	+,-	TRMT61A,CKB	3193,-2555
chr14:24659656-24659875	chr14	+	24659790	24659924	True	NM_024658,NM_006405,NM_001014842,NM_001184739	chr14,chr14,chr14,chr14	-,-,-,+	IPO4,TM9SF1,TM9SF1,TSSK4	-1666,5008,5008,15001
chr12:50789386-50789839	chr12	+	50789385	50789890	True	NR_033200,NM_052879,NM_001145475,NM_199190,NM_001170804,NM_001170803,NM_199188,NM_001170808	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,-,+,+,+,+,+	LARP4,LARP4,FAM186A,LARP4,LARP4,LARP4,LARP4,LARP4	4701,4701,571,4701,4701,4701,4701,4701
chr8:23338586-23339529	chr8	+	23338639	23339455	True	NM_016612,NM_001128930	chr8,chr8	+,-	SLC25A37,ENTPD4	46907,-23395
chr1:100319465-100319946	chr1	+	100319770	100319964	True	NM_000643,NM_000642,NM_000645,NM_000644,NM_000646,NM_000028,NM_001013660	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,+,-	AGL,AGL,AGL,AGL,AGL,AGL,FRRS1	-3783,-4188,6801,-3783,-3297,-3783,-88421
chr9:132404437-132404656	chr9	+	132404439	132404641	True	NM_014064,NM_017873,NM_001202403,NM_177999	chr9,chr9,chr9,chr9	+,-,-,-	METTL11A,ASB6,ASB6,ASB6	-16055,-1,-1,-1
chr10:103824159-103824903	chr10	+	103824255	103824846	True	NM_024747,NM_024541	chr10,chr10	+,-	HPS6,C10orf76	277,-8323
chr11:69062018-69062290	chr11	+	69062020	69062254	True	NM_145015,NM_138768	chr11,chr11	-,+	MRGPRF,MYEOV	-281170,-449
chr5:90575481-90575705	chr5	+	90575480	90575546	True	NM_020801,NR_027435	chr5,chr5	-,+	ARRDC3,LOC100129716	103661,100617
chr19:11908501-11908724	chr19	+	11908535	11908761	True	NM_152356,NM_001080493	chr19,chr19	+,-	ZNF491,ZNF823	629,-58775
chr2:109203271-109204373	chr2	+	109203445	109204401	True	NM_004987,NM_022336,NM_001193488	chr2,chr2,chr2	+,-,+	LIMS1,EDAR,LIMS1	365,401477,520
chr7:98030809-98031524	chr7	+	98030817	98031569	True	NM_001159491,NM_018842	chr7,chr7	+,-	BRI3,BAIAP2L1	-119889,-390
chr14:65437080-65437776	chr14	+	65437169	65437821	True	NM_002028,NM_198686	chr14,chr14	+,-	FNTB,RAB15	15685,1104
chr2:207572062-207573978	chr2	+	207572195	207573684	True	NM_001093730,NM_001136193	chr2,chr2	-,+	DYTN,FASTKD2	9486,56427
chr2:128404919-128405382	chr2	+	128404955	128405363	True	NM_005291,NM_001161416,NR_027823,NM_001161417,NM_001161415	chr2,chr2,chr2,chr2,chr2	+,+,-,+,+	GPR17,GPR17,LIMS2,GPR17,GPR17	-1567,-1567,440,-1567,-1567
chr19:47633164-47633995	chr19	+	47633448	47634028	True	NR_027280,NM_015168,NM_001145714,NM_001145713,NM_005500	chr19,chr19,chr19,chr19,chr19	+,-,+,+,+	SAE1,ZC3H4,SAE1,SAE1,SAE1	86,-16439,51,51,51
chrX:48327527-48328992	chrX	+	48327538	48328706	True	NM_012280,NM_033518,NM_177439,NM_177434	chrX,chrX,chrX,chrX	+,-,+,+	FTSJ1,SLC38A5,FTSJ1,FTSJ1	5842,-12,5842,7673
chr16:3063373-3063745	chr16	+	3063546	3063780	True	NM_021195,NM_020982,NM_016639	chr16,chr16,chr16	-,+,+	CLDN6,CLDN9,TNFRSF12A	4458,-1140,6532
chr7:6315127-6315424	chr7	+	6315138	6315289	True	NM_006908,NM_004227	chr7,chr7	+,-	RAC1,CYTH3	98836,-2896
chr1:39173845-39174381	chr1	+	39173973	39174415	True	NM_001136275,NM_022157	chr1,chr1	+,-	AKIRIN1,RRAGC	282500,150975
chr3:9775893-9776402	chr3	+	9775897	9776451	True	NM_004634,NM_003656,NM_001003694	chr3,chr3,chr3	+,-,+	BRPF1,CAMK1,BRPF1	-2514,35267,-2514
chr12:9801578-9802176	chr12	+	9801875	9802119	True	NM_002258,NR_002814	chr12,chr12	-,+	KLRB1,LOC374443	-41378,-1290
chr16:404113-405084	chr16	+	404243	404957	True	NM_181050,NM_003502,NR_024453	chr16,chr16,chr16	-,-,+	AXIN1,AXIN1,LOC100134368	-1567,-1567,27283
chr20:56890144-56890851	chr20	+	56890158	56890708	True	NR_003505,NM_020673	chr20,chr20	-,+	PPP4R1L,RAB22A	-5663,-5438
chr5:32444940-32445368	chr5	+	32445121	32445407	True	NM_016107,NM_006713	chr5,chr5	-,+	ZFR,SUB1	-277,140197
chr11:1858552-1858759	chr11	+	1858694	1858776	True	NM_001145829,NR_036185,NM_138567,NM_001145841,NM_003282	chr11,chr11,chr11,chr11,chr11	+,-,+,+,+	TNNI2,MIR4298,SYT8,TNNI2,TNNI2	1942,22040,-3071,2655,1456
chr14:53196688-53196970	chr14	+	53196811	53197001	True	NM_014584,NM_001130701,NM_145251	chr14,chr14,chr14	-,+,+	ERO1L,STYX,STYX	-34392,21,21
chr1:236687764-236689412	chr1	+	236687808	236689363	True	NM_201545,NM_201544,NM_201543,NR_034040,NM_006499	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	LGALS8,LGALS8,LGALS8,LOC100287902,LGALS8	-6345,-832,-1120,0,-1120
chr19:13105388-13106185	chr19	+	13105584	13106032	True	NM_002501,NM_052850	chr19,chr19	+,-	NFIX,GADD45GIP1	551,-37534
chr12:93410205-93410582	chr12	+	93410205	93410612	True	NM_001004330,NM_003566	chr12,chr12	+,-	PLEKHG7,EEA1	-279993,-87098
chr19:46194547-46195134	chr19	+	46194725	46195172	True	NM_177542,NM_001163377,NM_017659,NM_004597	chr19,chr19,chr19,chr19	-,+,+,-	SNRPD2,QPCTL,QPCTL,SNRPD2	321,568,568,321
chr4:46065899-46067785	chr4	+	46066457	46067453	True	NM_173536,NM_000812	chr4,chr4	-,+	GABRG1,GABRB1	58681,965841
chr1:860408-860661	chr1	+	860545	860615	True	NM_152486,NR_026874	chr1,chr1	+,-	SAMD11,FLJ39609	505,-5728
chr6:46913888-46915717	chr6	+	46914033	46915349	True	NM_005588,NM_015234	chr6,chr6	+,-	MEP1A,GPR116	-152992,7376
chr20:61340974-61341214	chr20	+	61340988	61341214	True	NM_002531,NR_024470	chr20,chr20	+,-	NTSR1,LOC100127888	-850,-43015
chr17:4642117-4642384	chr17	+	4642150	4642358	True	NM_001100812,NM_001001683,NM_032265,NM_022059,NM_001136046	chr17,chr17,chr17,chr17,chr17	-,+,+,-,+	CXCL16,MED11,ZMYND15,CXCL16,ZMYND15	915,-7478,978,915,960
chr22:43505597-43506101	chr22	+	43505615	43505905	True	NM_001197,NR_027779	chr22,chr22	+,-	BIK,TTLL1	851,-20181
chr2:113833316-113834812	chr2	+	113833458	113834772	True	NM_032556,NM_173161,NM_173178	chr2,chr2,chr2	+,+,-	IL1F10,IL1F10,IL1F8	-3614,-7962,-23018
chr1:35326116-35326334	chr1	+	35326116	35326184	True	NM_001164824,NM_001164825,NM_138428,NM_002060	chr1,chr1,chr1,chr1	-,-,-,+	C1orf212,C1orf212,C1orf212,GJA4	-1470,-778,-699,-67568
chr3:180630273-180630698	chr3	+	180630426	180630564	True	NM_005087,NM_001190233,NM_001013438,NM_001013439	chr3,chr3,chr3,chr3	+,-,+,+	FXR1,DNAJC19,FXR1,FXR1	-243,76792,-243,-243
chr8:57123702-57124282	chr8	+	57123749	57124086	True	NM_001011669,NM_002655,NM_001011667,NM_001011670,NM_001011671,NM_024300,NM_001114634,NM_001114635,NM_001011668	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	+,-,+,+,+,+,-,-,+	CHCHD7,PLAG1,CHCHD7,CHCHD7,CHCHD7,CHCHD7,PLAG1,PLAG1,CHCHD7	228,72,228,228,228,228,72,72,228
chr20:2084063-2084541	chr20	+	2084178	2084324	True	NM_080836,NM_024411	chr20,chr20	+,-	STK35,PDYN	-1701,-109247
chr12:109027638-109028771	chr12	+	109027729	109028663	True	NM_003006,NM_213595	chr12,chr12	-,+	SELPLG,ISCU	-59,-71487
chr21:44778076-44779194	chr21	+	44778241	44779113	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	90790,67939
chr9:95434324-95435217	chr9	+	95434517	95435179	True	NM_022755,NR_036505	chr9,chr9	-,+	IPPK,LOC100128361	-1970,-54236
chr4:17579159-17579431	chr4	+	17579166	17579476	True	NM_000320,NM_015907	chr4,chr4	-,+	QDPR,LAP3	-65309,-290
chrX:48553787-48554698	chrX	+	48553831	48554595	True	NM_013271,NM_003173	chrX,chrX	-,+	PCSK1N,SUV39H1	139415,535
chr12:13153706-13154135	chr12	+	13153791	13154022	True	NM_015987,NR_002774	chr12,chr12	-,+	HEBP1,HTR7P1	-548,-466
chr9:97401362-97401599	chr9	+	97401416	97401606	True	NM_000507,NM_001193331,NM_001127628	chr9,chr9,chr9	-,+,-	FBP1,C9orf3,FBP1	367,87344,975
chr6:31600717-31601177	chr6_mcf_hap5	+	2980662	2980747	False	NR_002971,NM_001098534	chr6_mcf_hap5,chr6_mcf_hap5	+,-	SNORA38,BAG6	-10167,19160
chr6:31600717-31601177	chr6_dbb_hap3	+	2886546	2886631	False	NR_002971,NM_001098534	chr6_dbb_hap3,chr6_dbb_hap3	+,-	SNORA38,BAG6	-10169,19175
chr6:31600717-31601177	chr6_mann_hap4	+	2943858	2943943	False	NR_002971,NM_001098534	chr6_mann_hap4,chr6_mann_hap4	+,-	SNORA38,BAG6	-10175,19173
chr6:31600717-31601177	chr6	+	31600974	31601059	True	NR_002971,NM_001098534	chr6,chr6	+,-	SNORA38,BAG6	-10172,19168
chr16:30076433-30076665	chr16	+	30076484	30076634	True	NM_004608,NM_184043,NM_184041,NM_001127617	chr16,chr16,chr16,chr16	-,+,+,+	TBX6,ALDOA,ALDOA,ALDOA	26621,-935,409,-562
chr20:62609425-62609847	chr20	+	62609424	62609840	True	NM_080621,NM_012469,NM_020713	chr20,chr20,chr20	-,+,-	SAMD10,PRPF6,ZNF512B	1205,2590,-8206
chr4:184405058-184406624	chr4	+	184405145	184406175	True	NR_033995,NM_001564	chr4,chr4	-,+	LOC389247,ING2	19553,20044
chr6:26196792-26197344	chr6	+	26196918	26197304	True	NM_021065,NM_003545,NM_003539,NM_003530,NM_003522	chr6,chr6,chr6,chr6,chr6	-,+,-,-,+	HIST1H2AD,HIST1H4E,HIST1H4D,HIST1H3D,HIST1H2BF	2217,7568,-7614,2210,2482
chr5:176853388-176853600	chr5	+	176853394	176853456	True	NM_001004106,NM_000505,NM_001004105,NM_002082	chr5,chr5,chr5,chr5	+,-,+,+	GRK6,F12,GRK6,GRK6	230,-16817,230,230
chr5:115151044-115151347	chr5	+	115151055	115151378	True	NM_001284,NM_001801	chr5,chr5	+,-	AP3S1,CDO1	26240,1077
chr15:59980680-59981233	chr15	+	59980679	59981095	True	NM_004751,NM_004330	chr15,chr15	+,-	GCNT3,BNIP2	-76748,597
chr1:101353413-101354987	chr1	+	101353545	101354598	True	NM_001439,NM_133496,NM_001144884,NM_001033025	chr1,chr1,chr1,chr1	-,+,+,-	EXTL2,SLC30A7,SLC30A7,EXTL2	5879,7035,7033,5879
chr4:75228040-75229299	chr4	+	75228186	75229066	True	NM_001432,NM_002089	chr4,chr4	+,-	EREG,CXCL2	1793,-263189
chr1:224044244-224044716	chr1	+	224044325	224044753	True	NM_005426,NM_001748	chr1,chr1	-,+	TP53BP2,CAPN2	-10651,-144257
chr5:2750161-2750516	chr5	+	2750206	2750477	True	NM_178569,NM_001134222,NM_033267	chr5,chr5,chr5	+,-,-	C5orf38,IRX2,IRX2	1784,1343,1343
chr10:124457904-124458362	chr10	+	124457909	124458365	True	NM_001010912,NR_003570	chr10,chr10	-,+	C10orf120,FLJ46361	1023,57844
chr10:52419434-52420017	chr10	+	52419442	52420056	True	NM_147156,NM_001079516	chr10,chr10	-,+	SGMS1,ASAH2B	-35705,79651
chr3:100365723-100366541	chr3	+	100366038	100366478	True	NM_032787,NM_014820	chr3,chr3	+,-	GPR128,TOMM70A	-37664,-245813
chr3:118762369-118764012	chr3	+	118762398	118763991	True	NM_152539,NM_001015887	chr3,chr3	+,-	C3orf30,IGSF11	101005,-8722
chr7:6746668-6746936	chr7	+	6746721	6746983	True	NR_002217,NM_006956,NM_016265	chr7,chr7,chr7	+,-,-	PMS2CL,ZNF12,ZNF12	27952,-155,-155
chr1:161129686-161129968	chr1	+	161129808	161129968	True	NM_016406,NM_001122764,NM_012475,NM_000309,NM_001199873,NM_001014443	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,-,+	UFC1,PPOX,USP21,PPOX,B4GALT3,USP21	-6325,6212,-605,6212,17840,-605
chr4:82384649-82386092	chr4	+	82384743	82385943	True	NM_152545,NM_001201	chr4,chr4	-,+	RASGEF1B,BMP3	7168,-432683
chr4:21293399-21294195	chr4	+	21293655	21294233	True	NM_145048,NM_147183	chr4,chr4	+,-	PACRGL,KCNIP4	-591681,11346
chr1:55263243-55264061	chr1	+	55263370	55264096	True	NM_152607,NM_001114108,NM_001110533,NM_017904	chr1,chr1,chr1,chr1	+,-,+,-	C1orf177,TTC22,C1orf177,TTC22	7639,2895,7639,2895
chr1:6544818-6545100	chr1	+	6544826	6545132	True	NM_001042665,NM_001042664,NM_020631,NM_031475	chr1,chr1,chr1,chr1	-,-,-,+	PLEKHG5,PLEKHG5,PLEKHG5,ESPN	932,5558,6678,-60029
chr11:69590619-69591367	chr11	+	69590713	69591021	True	NM_002007,NM_053056	chr11,chr11	-,+	FGF4,CCND1	-542,-134891
chr6:70576583-70577065	chr6	+	70576586	70577047	True	NM_018368,NM_001858	chr6,chr6	-,+	LMBRD1,COL19A1	-69537,-189
chr2:232457638-232458094	chr2	+	232457779	232458091	True	NM_006056,NM_152614	chr2,chr2	-,+	NMUR1,C2orf57	-62597,-255
chr20:61473391-61473833	chr20	+	61473397	61473790	True	NM_006602,NM_080750	chr20,chr20	-,+	TCFL5,DPH3P1	19375,2685
chr11:120531314-120531851	chr11	+	120531316	120531890	True	NM_012101,NM_014619	chr11,chr11	-,+	TRIM29,GRIK4	-522453,-340
chr5:77945789-77947401	chr5	+	77945812	77946790	True	NM_004866,NM_005779	chr5,chr5	+,-	SCAMP1,LHFPL2	-289524,-1164
chr5:179285695-179285927	chr5	+	179285753	179285941	True	NM_003900,NM_001017987,NM_016175	chr5,chr5,chr5	+,-,-	SQSTM1,C5orf45,C5orf45	-37962,-51,-51
chr2:180565661-180566009	chr2	+	180565811	180566010	True	NM_019091,NM_001113397	chr2,chr2	+,-	PLEKHA3,ZNF385B	-1220666,44814
chr19:12886489-12886850	chr19	+	12886616	12886689	True	NM_002229,NM_013312,NM_001100176	chr19,chr19,chr19	+,-,-	JUNB,HOOK2,HOOK2	15620,-182,-182
chr1:184357554-184359196	chr1	+	184357578	184359221	True	NM_015101,NM_030806	chr1,chr1	-,+	GLT25D2,C1orf21	-350715,-1479
chr7:102790105-102791076	chr7	+	102790261	102791080	True	NR_026660,NM_198990,NM_001122838,NM_031905	chr7,chr7,chr7,chr7	-,-,-,+	RPL19P12,NAPEPLD,NAPEPLD,ARMC10	-7411,-692,-692,-74986
chr17:36984151-36984926	chr17	+	36984654	36984778	True	NM_017748,NM_006148	chr17,chr17	-,+	CWC25,LASP1	-3065,41333
chr2:87760760-87761526	chr2	+	87760802	87761522	True	NM_001078170,NR_024206,NR_024204,NR_024205	chr2,chr2,chr2,chr2	-,+,+,+	RGPD2,NCRNA00152,NCRNA00152,NCRNA00152	363814,-5889,-5889,-5889
chr2:87760760-87761526	chr2	-	112246091	112246812	False	NR_024373,NM_207003,NR_015395	chr2,chr2,chr2	-,+,-	LOC541471,BCL2L11,LOC541471	5940,-367651,5940
chr14:69864361-69864715	chr14	+	69864655	69864725	True	NM_004450,NM_018375	chr14,chr14	-,+	ERH,SLC39A9	346,681
chr12:71832200-71833068	chr12	+	71832320	71833052	True	NM_003667,NM_144982	chr12,chr12	+,-	LGR5,ZFC3H1	760,224747
chr3:53083568-53083983	chr3	+	53083960	53084029	True	NM_016329,NM_006254,NM_001005158,NM_001005159	chr3,chr3,chr3,chr3	-,+,-,-	SFMBT1,PRKCD,SFMBT1,SFMBT1	-3871,111193,-3871,-4625
chr16:30796966-30797620	chr16	+	30796977	30797667	True	NM_001080417,NM_014771	chr16,chr16	-,+	ZNF629,RNF40	906,-23398
chrX:54384978-54385286	chrX	+	54384982	54385278	True	NM_001002838,NM_020922,NM_058163	chrX,chrX,chrX	-,-,+	WNK3,WNK3,TSR2	-544,-544,81574
chrX:128787153-128787921	chrX	+	128787214	128787778	True	NM_017413,NM_003399	chrX,chrX	-,+	APLN,XPNPEP2	1205,85167
chr15:45875492-45876063	chr15	+	45875676	45876042	True	NM_012388,NM_013309	chr15,chr15	+,-	PLDN,SLC30A4	3374,-60674
chr14:31345055-31346095	chr14	+	31345089	31345997	True	NM_004086,NM_001135058,NR_030354	chr14,chr14,chr14	+,+,-	COCH,COCH,MIR624	-1399,-1399,138014
chr4:189062412-189063048	chr4	+	189062606	189062932	True	NM_173553,NM_178556	chr4,chr4	-,+	TRIML2,TRIML1	-36198,-2066
chr1:228291422-228293304	chr1	+	228291653	228293081	True	NM_181456,NM_181454,NM_181455,NM_181441,NR_037415,NM_181465,NM_181464,NM_024319,NM_181463,NM_181462	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,+,-,-,-,-,-	MRPL55,MRPL55,MRPL55,MRPL55,MIR3620,MRPL55,MRPL55,C1orf35,MRPL55,MRPL55	3982,3982,3982,3982,-6740,3982,3982,-631,3982,3982
chr1:40422152-40423498	chr1	+	40422232	40423433	True	NM_005376,NM_001136493,NM_032793	chr1,chr1,chr1	-,+,+	MYCL1,MFSD2A,MFSD2A	-54545,-1499,-1499
chr11:65222773-65223241	chr11	+	65222787	65223247	True	NR_030343,NM_182556	chr11,chr11	+,-	MIR612,SLC25A45	-10909,-72645
chr1:246949647-246949957	chr1	+	246949778	246949982	True	NR_015422,NM_015446	chr1,chr1	+,-	LOC149134,AHCTF1	2936,144794
chr1:212186606-212187526	chr1	+	212186917	212187524	True	NM_016448,NM_001199809	chr1,chr1	+,-	DTL,INTS7	21394,21533
chr12:58142312-58142647	chr12	+	58142311	58142479	True	NM_005981,NM_014770,NM_138396,NM_000075	chr12,chr12,chr12,chr12	+,-,+,-	TSPAN31,AGAP2,MARCH9,CDK4	-3578,-6371,6420,3735
chr18:13006582-13006983	chr18	+	13006644	13006862	True	NM_002828,NM_032142	chr18,chr18	-,+	PTPN2,CEP192	-122310,-15334
chr9:133452578-133453950	chr9	+	133452684	133453631	True	NR_027440,NM_003934	chr9,chr9	-,+	LOC100272217,FUBP3	1301,1328
chr6:168851874-168853691	chr6	+	168851971	168853413	True	NM_214462,NM_022138	chr6,chr6	-,+	DACT2,SMOC2	-131569,-10198
chr1:236679304-236679647	chr1	+	236679315	236679534	True	NM_201545,NM_201544,NM_201543,NR_034040,NM_006499	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	LGALS8,LGALS8,LGALS8,LOC100287902,LGALS8	1979,7492,7204,8331,7204
chr7:44230898-44232537	chr7	+	44230909	44232548	True	NM_006555,NM_000162	chr7,chr7	+,-	YKT6,GCK	8029,-1887
chr14:96673476-96675138	chr14	+	96673853	96675139	True	NM_000623,NM_018036	chr14,chr14	+,-	BDKRB2,ATG2B	-2769,154589
chr12:50344908-50345501	chr12	+	50344954	50345550	True	NM_000486,NM_001651,NR_026948	chr12,chr12,chr12	+,+,-	AQP2,AQP5,LOC283332	-481,9728,-39308
chr4:170929604-170930388	chr4	+	170929703	170930188	True	NM_001009554,NM_173872	chr4,chr4	-,+	MFAP3L,CLCN3	-4768,-388033
chr19:5913861-5914449	chr19	+	5913878	5914450	True	NR_034166,NM_001193375,NM_001017921,NM_175614,NM_004058,NM_080590	chr19,chr19,chr19,chr19,chr19,chr19	-,-,+,-,+,+	NDUFA11,NDUFA11,VMAC,NDUFA11,CAPS,CAPS	-9854,-9854,-9077,-9854,80,80
chr18:40675273-40676032	chr18	+	40675623	40676064	True	NM_002647,NM_002930	chr18,chr18	+,-	PIK3C3,RIT2	-1140489,19656
chr12:57084019-57084502	chr12	+	57084253	57084502	True	NM_003725,NM_006601	chr12,chr12	+,-	HSD17B6,PTGES3	72605,-2175
chr17:7383331-7383893	chr17	+	7383399	7383747	True	NM_000937,NM_020899,NM_001128833,NM_001102614	chr17,chr17,chr17,chr17	+,-,-,+	POLR2A,ZBTB4,ZBTB4,AMAC1L3	3950,3871,-455,973
chr15:85144547-85145002	chr15	+	85144696	85144935	True	NM_017894,NM_001007072,NM_181877,NR_003661	chr15,chr15,chr15,chr15	+,+,+,-	ZSCAN2,ZSCAN2,ZSCAN2,UBE2Q2P1	-498,-498,-498,-30670
chr21:38827280-38829133	chr21	+	38827840	38829164	True	NM_006052,NM_001396	chr21,chr21	-,+	DSCR3,DYRK1A	-188007,-35290
chr16:89766351-89766568	chr16	+	89766356	89766590	True	NR_036480,NM_152339	chr16,chr16	+,-	LOC100128881,SPATA2L	11673,1581
chr13:58206871-58207118	chr13	+	58206932	58207120	True	NM_001040429,NM_030932	chr13,chr13	+,-	PCDH17,DIAPH3	-1194,2380273
chr15:42446678-42447727	chr15	+	42446813	42447630	True	NM_198141,NM_213600,NR_033151	chr15,chr15,chr15	+,-,-	GANC,PLA2G4F,PLA2G4F	118735,1260,1260
chr3:12042364-12043402	chr3	+	12042422	12043410	True	NM_138807,NM_133625,NM_003178	chr3,chr3,chr3	-,+,+	C3orf31,SYN2,SYN2	-154070,2451,2451
chr14:100148764-100149133	chr14	+	100148941	100149042	True	NM_001144995,NM_006668	chr14,chr14	-,+	CCDC85C,CYP46A1	-78214,1712
chrX:37913573-37914263	chrX	+	37913581	37913817	True	NM_001163334,NM_001170750	chrX,chrX	+,-	SYTL5,SRPX	-20845,166410
chr19:45734491-45735301	chr19	+	45734516	45735296	True	NM_001199867,NM_138568	chr19,chr19	+,-	MARK4,EXOC3L2	19219,2223
chr1:27931075-27931409	chr1	+	27931107	27931387	True	NM_001029882,NM_001143912	chr1,chr1	-,+	AHDC1,FAM76A	-964,121102
chr1:27248613-27248956	chr1	+	27248702	27248990	True	NM_021969,NM_006600	chr1,chr1	-,+	NR0B2,NUDC	-8135,-529
chr1:89995840-89996333	chr1	+	89996021	89996313	True	NR_033981,NM_001134476	chr1,chr1	-,+	FLJ27354,LRRC8B	102190,-5692
chr6:13956849-13958539	chr6	+	13956956	13958178	True	NM_001031713,NM_001165033	chr6,chr6	-,+	CCDC90A,RNF182	-142167,-31584
chr19:17358492-17360038	chr19	+	17358732	17359960	True	NM_005234,NM_014173	chr19,chr19	-,+	NR2F6,BABAM1	-2581,18271
chr1:146057432-146058247	chr1	+	146057647	146057717	True	NM_001101663,NM_001097616	chr1,chr1	-,+	NBPF24,GPR89C	10578,-173830
chr1:146057432-146058247	chr1	+	16918730	16918980	False	NR_037446,NM_017940	chr1,chr1	+,-	MIR3675,NBPF1	-43572,21252
chr1:146057432-146058247	chr1	+	148346966	148347031	False	NM_001164262,NM_001170755	chr1,chr1	-,+	PPIAL4F,NBPF15	-144430,211156
chr1:146057432-146058247	chr1	+	147599484	147599554	False	NM_001101663,NM_001097616	chr1,chr1	-,+	NBPF24,GPR89C	10577,-173968
chr1:146057432-146058247	chr1	-	146395073	146395143	False	NR_024442,NR_002305	chr1,chr1	-,+	LOC728989,PDIA3P	119506,254286
chr1:146057432-146058247	chr1	-	145293150	145293207	False	NM_032305,NM_001039703	chr1,chr1	-,+	POLR3GL,NBPF10	177237,163
chr1:146057432-146058247	chr1	-	144614856	144614933	False	NR_003242,NM_001037675	chr1,chr1	-,+	C1orf152,NBPF9	-2129,25
chr7:6656005-6656647	chr7	+	6656031	6656599	True	NM_017560,NM_001145118	chr7,chr7	+,-	ZNF853,GRID2IP	-555,-64964
chr11:82904697-82904945	chr11	+	82904716	82904972	True	NM_182603,NM_021825	chr11,chr11	+,-	ANKRD42,CCDC90B	318,92455
chr6:80377903-80379217	chr6	+	80377927	80379120	True	NM_031469,NM_181714	chr6,chr6	+,-	SH3BGRL2,LCA5	-36978,-130780
chr12:47609691-47610274	chr12	+	47609988	47610234	True	NM_138371,NR_026544	chr12,chr12	+,-	FAM113B,LOC100233209	13,44
chr17:73105728-73106053	chr17	+	73105798	73105980	True	NM_014595,NM_024585	chr17,chr17	-,+	NT5C,ARMC7	21947,101
chr11:62108250-62108964	chr11	+	62108249	62108634	True	NM_001083926,NM_206998,NM_025080	chr11,chr11,chr11	+,-,+	ASRGL1,SCGB1D4,ASRGL1	-3535,-41713,-3535
chr15:74608595-74609624	chr15	+	74608723	74609345	True	NM_001099773,NM_182791	chr15,chr15	-,+	CYP11A1,CCDC33	49258,1554
chr10:74713575-74714323	chr10	+	74713646	74714323	True	NM_152635,NM_032562	chr10,chr10	+,-	OIT3,PLA2G12B	-60358,237
chr21:45585423-45585866	chr21	+	45585673	45585747	True	NM_198155,NM_015259	chr21,chr21	+,-	C21orf33,ICOSLG	-32230,75137
chr8:11995936-11996595	chr8	+	11996094	11996606	True	NM_201402,NR_003275,NR_027425	chr8,chr8,chr8	-,-,+	USP17L2,LOC392196,FAM66D	-145,-9290,-22854
chr8:11995936-11996595	chr8	+	11991663	11991717	False	NM_201402,NR_003275,NR_027425	chr8,chr8,chr8	-,-,+	USP17L2,LOC392196,FAM66D	4604,-4859,-18423
chr8:11995936-11996595	chr8	-	7194299	7194349	False	NR_027423,NR_003668	chr8,chr8	-,+	FAM66B,DEFB109P1B	18577,-23982
chr8:11995936-11996595	chr8	+	7831060	7831110	False	NR_003668,NR_027424	chr8,chr8	-,+	DEFB109P1B,FAM66E	23983,-18576
chr9:65603163-65603989	chr9	+	65603162	65603882	True	NR_024496,NM_015667	chr9,chr9	+,-	LOC442421,FAM75A7	890386,-93552
chr9:65603163-65603989	chr9	-	39131902	39131952	False	NM_033655,NM_001085452	chr9,chr9	-,+	CNTNAP3,FAM75A1	156398,223746
chr9:65603163-65603989	chr9	+	43861558	43862232	False	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	-230828,-176726
chr18:32392801-32393355	chr18	+	32392801	32393106	True	NM_001198944,NM_001198942,NM_001198943,NM_001112734,NM_032981,NM_032980	chr18,chr18,chr18,chr18,chr18,chr18	+,+,+,-,+,+	DTNA,DTNA,DTNA,ZSCAN30,DTNA,DTNA	5140,5140,4819,477147,5195,5195
chr6:36514611-36514862	chr6	+	36514615	36514899	True	NM_003017,NM_007271	chr6,chr6	+,-	SRSF3,STK38	47190,398
chr20:29952985-29953879	chr20	+	29953153	29953823	True	NM_153289,NM_054112	chr20,chr20	-,+	DEFB119,DEFB118	24639,2597
chr2:32403693-32405592	chr2	+	32403769	32405479	True	NM_017964,NM_001199138	chr2,chr2	+,-	SLC30A6,NLRC4	-12919,84520
chr16:3165936-3166338	chr16	+	3165944	3166332	True	NM_001042428,NR_024167,NR_024166,NM_003456	chr16,chr16,chr16,chr16	+,-,-,+	ZNF205,MGC3771,MGC3771,ZNF205	-3432,-345,-345,-3432
chr20:2451133-2451365	chr20	+	2451158	2451398	True	NR_003684,NM_003091,NM_080751,NM_198216	chr20,chr20,chr20,chr20	-,-,+,-	SNORD119,SNRPB,TMC2,SNRPB	-7465,151,65854,151
chr2:229045641-229045887	chr2	+	229045651	229045936	True	NM_178821,NM_001142644,NM_030623	chr2,chr2,chr2	+,-,-	WDR69,SPHKAP,SPHKAP	-309375,475,475
chr11:66189249-66189659	chr11	+	66189275	66189677	True	NM_178864,NM_016050	chr11,chr11	+,-	NPAS4,MRPL11	-851,16683
chrX:54385815-54386190	chrX	+	54385815	54386240	True	NM_001002838,NM_020922,NM_058163	chrX,chrX,chrX	-,-,+	WNK3,WNK3,TSR2	-1377,-1377,80612
chr13:45492950-45493322	chr13	+	45492985	45493273	True	NM_012345,NM_018559	chr13,chr13	-,+	NUFIP1,KIAA1704	70390,70413
chr22:39021316-39021803	chr22	+	39021483	39021625	True	NM_001002880,NM_001013647	chr22,chr22	+,-	CBY1,LOC646851	31032,31063
chr11:85444935-85446715	chr11	+	85444953	85446027	True	NM_206927,NM_206928,NM_032273	chr11,chr11,chr11	-,-,+	SYTL2,SYTL2,TMEM126A	-7442,-7442,-86049
chr13:33861812-33862115	chr13	+	33861825	33862152	True	NM_004795,NM_178006	chr13,chr13	+,-	KL,STARD13	-271305,-1924
chrX:149865483-149866038	chrX	+	149865495	149866013	True	NM_001184808,NM_003828	chrX,chrX	-,+	CD99L2,MTMR1	201329,-3677
chr14:24034880-24035339	chr14	+	24034911	24035377	True	NR_023314,NM_001126339,NM_024328,NM_003917	chr14,chr14,chr14,chr14	+,+,+,-	THTPA,THTPA,THTPA,AP1G2	-9764,-9764,-9764,1952
chr13:27127279-27127674	chr13	+	27127329	27127656	True	NM_005288,NM_006646	chr13,chr13	-,+	GPR12,WASF3	207325,4183
chr9:43626910-43627505	chr9	+	43627218	43627532	True	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	3248,57352
chr9:32783821-32784429	chr9	+	32783917	32784443	True	NM_212558,NM_153809	chr9,chr9	+,-	TMEM215,TAF1L	-478,-148250
chr17:34809256-34810244	chr17	+	34809306	34810278	True	NM_001001418,NM_004773,NM_001040282	chr17,chr17,chr17	-,+,-	TBC1D3C,ZNHIT3,TBC1D3G	-1215,32194,-1203
chr17:34809256-34810244	chr17	-	36282627	36282756	False	NM_032258,NR_024178,NM_001123391	chr17,chr17,chr17	+,-,+	TBC1D3F,LOC284100,TBC1D3	1203,-38264,1203
chr17:34809256-34810244	chr17	+	34758257	34759223	False	NM_001123392,NM_004773	chr17,chr17	-,+	TBC1D3H,ZNHIT3	-1207,83249
chr17:34809256-34810244	chr17	+	34505198	34505327	False	NM_001001417,NM_001001435	chr17,chr17	-,+	TBC1D3B,CCL4L1	-1210,33140
chr17:34809256-34810244	chr17	+	34593242	34593930	False	NM_001001435,NM_001001418	chr17,chr17	+,-	CCL4L1,TBC1D3C	46103,-1215
chr2:110768072-110769434	chr2	+	110768200	110769458	True	NR_037627,NR_036225	chr2,chr2	+,-	LOC100288570,MIR4267	-62984,58211
chr2:110768072-110769434	chr2	-	111117087	111118344	False	NR_037626,NR_027244	chr2,chr2	+,-	LOC100507334,LOC151009	-113923,23819
chr7:122473495-122474454	chr7	+	122473818	122474337	True	NM_001009571,NR_036484	chr7,chr7	-,+	CADPS2,LOC154860	52530,-530165
chr17:12920778-12921018	chr17	+	12920797	12921053	True	NM_014859,NM_018127,NM_001165962,NM_173717	chr17,chr17,chr17,chr17	+,-,-,-	ARHGAP44,ELAC2,ELAC2,ELAC2	-228019,378,378,378
chr17:41003254-41003626	chr17	+	41003295	41003413	True	NM_001158,NM_003734,NM_009590,NM_003766	chr17,chr17,chr17,chr17	+,+,+,-	AOC2,AOC3,AOC2,BECN1	-6737,-145,-6737,-26985
chr15:91428454-91428745	chr15	+	91428478	91428788	True	NM_002005,NM_001143783,NM_198527,NM_001143784,NM_001143785	chr15,chr15,chr15,chr15,chr15	+,+,-,+,+	FES,FES,HDDC3,FES,FES	-841,-253,47036,-253,-864
chr10:128599455-128600028	chr10	+	128599509	128600000	True	NM_001004298,NM_001380	chr10,chr10	-,+	C10orf90,DOCK1	-389499,-5539
chrX:48957467-48957697	chrX	+	48957498	48957746	True	NM_001163323,NM_007075	chrX,chrX	+,-	CCDC120,WDR45	-41033,365
chr9:103347460-103348319	chr9	+	103347502	103348234	True	NM_017746,NM_001018116	chr9,chr9	-,+	TEX10,MURC	-232243,-7224
chr7:33945506-33945815	chr7	+	33945526	33945862	True	NM_133468,NM_203288	chr7,chr7	+,-	BMPER,RP9	-465,-796524
chr2:113522223-113522492	chr2	+	113522237	113522411	True	NM_152515,NM_005415	chr2,chr2	-,+	CKAP2L,SLC20A1	-3,-118854
chr3:127871504-127872226	chr3	+	127871639	127872262	True	NM_021937,NM_003707	chr3,chr3	+,-	EEFSEC,RUVBL1	50,-28968
chr3:9438918-9439129	chr3	+	9438965	9439153	True	NM_001080517,NR_027007	chr3,chr3	+,-	SETD5,LOC440944	249,71
chr19:51399237-51400571	chr19	+	51399486	51400588	True	NR_002948,NM_005551	chr19,chr19	-,+	KLKP1,KLK2	168,-22848
chr1:154951219-154951603	chr5	-	61808042	61808094	True	NM_181506,NM_014473	chr5,chr5	+,-	LRRC70,DIMT1L	66467,-108314
chr19:50529952-50531036	chr19	+	50530189	50530867	True	NM_001025778,NM_001006656,NM_016440,NM_015428	chr19,chr19,chr19,chr19	-,+,-,+	VRK3,ZNF473,VRK3,ZNF473	-1384,-1028,-1384,-1028
chr17:7217034-7217365	chr17	+	7217049	7217397	True	NM_001970,NM_001143761,NM_004489,NM_001143760,NM_001143762	chr17,chr17,chr17,chr17,chr17	+,+,-,+,+	EIF5A,EIF5A,GPS2,EIF5A,EIF5A	-6244,-5812,1311,-6782,-5406
chr1:37941394-37941925	chr1	+	37941481	37941963	True	NM_022756,NM_025079	chr1,chr1	-,+	MEAF6,ZC3H12A	38451,-1413
chr1:43008517-43009216	chr1	+	43008546	43009264	True	NM_032257,NM_001080850	chr1,chr1	-,+	ZMYND12,CCDC30	-86608,-8041
chr12:16043916-16044596	chr12	+	16044208	16044585	True	NM_004447,NM_007178	chr12,chr12	-,+	EPS8,STRAP	-101698,-8981
chr6:51921511-51922281	chr6	+	51921535	51922224	True	NR_029713,NM_138694	chr6,chr6	+,-	MIR206,PKHD1	86922,30260
chr7:65336341-65337390	chr7	+	65336468	65337313	True	NM_000181,NM_173517	chr7,chr7	-,+	GUSB,VKORC1L1	110044,943
chr7:65336341-65337390	chr7	+	64497167	64497217	False	NR_033416,NM_001007253	chr7,chr7	+,-	CCT6P3,ERV3	1514,-30043
chr4:71770398-71771501	chr4	+	71770594	71771466	True	NM_002092,NM_173468	chr4,chr4	-,+	GRSF1,MOBKL1A	-64967,-2588
chr8:22844380-22844784	chr8	+	22844412	22844716	True	NM_001160037,NM_001160036,NM_144962	chr8,chr8,chr8	+,+,-	RHOBTB2,RHOBTB2,PEBP4	8644,213,-58991
chr10:101087323-101087900	chr10	+	101087586	101087769	True	NM_021828,NM_020348	chr10,chr10	-,+	HPSE2,CNNM1	-91954,1086
chr17:42976860-42977177	chr17	+	42976880	42977114	True	NM_001142605,NM_213607,NM_004247	chr17,chr17,chr17	-,+,-	EFTUD2,CCDC103,EFTUD2	7,39,7
chr4:156680678-156681020	chr4	+	156680880	156681040	True	NM_017419,NM_000857	chr4,chr4	-,+	ACCN5,GUCY1B3	106435,-805
chr6:36807919-36808645	chr6	+	36807955	36808687	True	NM_020939,NM_152734	chr6,chr6	-,+	CPNE5,C6orf89	-735,44952
chr4:82393413-82393721	chr4	+	82393445	82393733	True	NM_152545,NM_001201	chr4,chr4	-,+	RASGEF1B,BMP3	-384,-441384
chr17:3461241-3462011	chr17	+	3461369	3462003	True	NM_145068,NM_001031681	chr17,chr17	-,+	TRPV3,CTNS	-80,77758
chr13:29067704-29067937	chr13	+	29067753	29067819	True	NM_015932,NM_001159920,NM_001160031,NM_001160030,NM_002019	chr13,chr13,chr13,chr13,chr13	+,-,-,-,-	POMP,FLT1,FLT1,FLT1,FLT1	165321,1496,1496,1496,1496
chr7:155757305-155757674	chr7	+	155757343	155757697	True	NM_000193,NM_053043	chr7,chr7	-,+	SHH,RBM33	-152376,-320191
chr11:195620-197012	chr11	+	195686	197053	True	NM_053280,NM_001097610,NM_145651,NM_001098787	chr11,chr11,chr11,chr11	+,+,+,-	ODF3,LOC653486,SCGB1C1,BET1L	5,-2657,-2657,10419
chr12:12220957-12222041	chr12	+	12221164	12222072	True	NM_138722,NM_138723,NM_030766,NM_002336	chr12,chr12,chr12,chr12	+,+,+,-	BCL2L14,BCL2L14,BCL2L14,LRP6	2329,1805,2329,197789
chr11:68228712-68228954	chr11	+	68228732	68228954	True	NM_018312,NM_001164164,NM_001164161,NM_001164160,NM_001164163,NM_001164162,NM_022338	chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,+,-	PPP6R3,PPP6R3,PPP6R3,PPP6R3,PPP6R3,PPP6R3,C11orf24	-597,-597,-597,-597,-597,-597,-189263
chr10:92641738-92642342	chr10	+	92641738	92642114	True	NM_019860,NM_001104546	chr10,chr10	-,+	HTR7,RPP30	-24067,-10081
chr1:76209189-76209995	chr1	+	76209315	76209891	True	NM_152697,NM_001127328	chr1,chr1	-,+	SLC44A5,ACADM	-132516,-19323
chr5:3597702-3597934	chr5	+	3597741	3597973	True	NR_033898,NM_024337	chr5,chr5	-,+	LOC285577,IRX1	-61533,-1628
chrX:71399424-71401382	chrX	+	71399914	71401363	True	NR_033187,NM_001170747,NM_006223,NM_001024455	chrX,chrX,chrX,chrX	+,+,+,-	PIN4,PIN4,PIN4,RGAG4	162,162,162,-48163
chr15:53097166-53097568	chr15	+	53097172	53097555	True	NM_004498,NM_002748	chr15,chr15	-,+	ONECUT1,MAPK6	-14963,-785819
chr20:62369887-62370135	chr20	+	62369936	62370086	True	NM_020062,NM_003224,NM_017806	chr20,chr20,chr20	+,-,+	SLC2A4RG,ARFRP1,LIME1	1124,-30581,-2009
chr4:1893089-1893299	chr4	+	1893147	1893241	True	NM_007331,NM_012318,NM_133330,NM_133331,NM_133334,NM_133335	chr4,chr4,chr4,chr4,chr4,chr4	+,-,+,+,+,+	WHSC1,LETM1,WHSC1,WHSC1,WHSC1,WHSC1	1267,-35173,1267,1267,9111,1267
chr19:2738051-2739178	chr19	+	2738254	2739207	True	NM_003249,NM_213568,NM_144564	chr19,chr19,chr19	+,-,-	THOP1,SLC39A3,SLC39A3	46298,917,917
chr4:172729778-172731577	chr4	+	172730349	172731611	True	NR_036751,NM_001034845	chr4,chr4	-,+	HSP90AA6P,GALNTL6	-1204214,2963
chr11:71162475-71163492	chr11	+	71162559	71163507	True	NM_018161,NM_001360,NM_001163817	chr11,chr11,chr11	+,-,-	NADSYN1,DHCR7,DHCR7	709,-3082,-3082
chr4:186135827-186136238	chr4	+	186135900	186136107	True	NM_020827,NM_031953	chr4,chr4	-,+	KIAA1430,SNX25	-10718,-4680
chr6:155582786-155584755	chr6	+	155583162	155584780	True	NM_001001346,NM_016020	chr6,chr6	+,-	CLDN20,TFB1M	366,50887
chr6:36096546-36097385	chr6	+	36096575	36097225	True	NM_002754,NM_052961	chr6,chr6	+,-	MAPK13,SLC26A8	1036,-104162
chr11:17739706-17740854	chr11	+	17739904	17740740	True	NM_153676,NM_002478	chr11,chr11	-,+	USH1C,MYOD1	-173941,369
chr9:133815778-133816543	chr9	+	133815870	133816407	True	NM_001145106,NM_032843,NM_006059	chr9,chr9,chr9	-,-,+	FIBCD1,FIBCD1,LAMC3	-1415,-1631,68096
chr11:64690066-64690917	chr11	+	64690591	64690929	True	NM_015104,NM_006244	chr11,chr11	-,+	ATG2A,PPP2R5B	-5869,1213
chr14:20147622-20148771	chr14	+	20147625	20148145	True	NM_001197287,NM_172194	chr14,chr14	-,+	OR11H2,OR4Q3	34396,67441
chr5:10658691-10660506	chr5	+	10658812	10660417	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-94429,101027
chr5:178160349-178161103	chr5	+	178160348	178160828	True	NM_005649,NM_058230	chr5,chr5	-,+	ZNF354A,ZNF354B	-2645,126125
chr15:56536680-56537560	chr15	+	56536687	56537503	True	NM_022841,NM_198524	chr15,chr15	-,+	RFX7,TEX9	-1204,120140
chr16:5007738-5007960	chr16	+	5007853	5007960	True	NM_014692,NM_002705	chr16,chr16	+,-	SEC14L5,PPL	357,-20717
chr1:85633292-85633770	chr1	+	85633323	85633485	True	NM_145172,NM_032184	chr1,chr1	+,-	WDR63,SYDE2	-105383,33299
chr11:3076832-3077750	chr11	+	3076836	3077713	True	NM_001194997,NM_001014437,NR_036542,NM_139273,NM_001751,NM_002555	chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,-,+	CARS,CARS,CARS,CARS,CARS,SLC22A18	1018,1018,1018,1018,1018,-153376
chr19:6501461-6501674	chr19	+	6501504	6501666	True	NM_003811,NM_006087	chr19,chr19	+,-	TNFSF9,TUBB4	29343,714
chr11:126155420-126157018	chr11	+	126156322	126156937	True	NM_148910,NM_003139,NM_001039661	chr11,chr11,chr11	+,-,+	TIRAP,SRPR,TIRAP	-3405,-17445,-3405
chr15:89349739-89350797	chr15	+	89349923	89350649	True	NM_001135,NM_178232,NM_013227	chr15,chr15,chr15	+,-,+	ACAN,HAPLN3,ACAN	-3300,88171,-3300
chrX:108715832-108716679	chrX	+	108715848	108716704	True	NM_018698,NM_001522	chrX,chrX	+,-	NXT2,GUCY2F	62305,8631
chr12:52604977-52606659	chr12	+	52605014	52606476	True	NM_182507,NR_027358	chr12,chr12	-,+	KRT80,LOC283404	-19230,-360
chr17:1589967-1590331	chr17	+	1590120	1590336	True	NM_001163673,NM_006445	chr17,chr17	+,-	WDR81,PRPF8	29480,-1944
chr10:43865882-43866272	chr10	+	43866103	43866275	True	NM_001184963,NM_001098208,NM_173160	chr10,chr10,chr10	+,-,+	FXYD4,HNRNPF,FXYD4	816,26054,816
chr2:174631796-174632179	chr2	+	174631850	174632170	True	NM_145810,NM_001017371	chr2,chr2	+,-	CDCA7,SP3	-412341,196827
chr6:31962891-31964661	chr6_qbl_hap6	+	3258070	3258158	False	NR_001284,NM_001128590,NM_000500	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	-,+,+	TNXA,CYP21A2,CYP21A2	16600,8988,8988
chr6:31962891-31964661	chr6_mcf_hap5	+	3376861	3376949	False	NM_001128590,NM_000500,NM_032470	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	+,+,-	CYP21A2,CYP21A2,TNXB	8988,8988,-15967
chr6:31962891-31964661	chr6	+	31964279	31964367	True	NR_001284,NM_001128590,NM_000500	chr6,chr6,chr6	-,+,+	TNXA,CYP21A2,CYP21A2	16483,8991,8991
chr6:31962891-31964661	chr6_dbb_hap3	+	3249861	3249949	False	NR_001284,NM_001128590,NM_000500	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	-,+,+	TNXA,CYP21A2,CYP21A2	16484,8992,8992
chrX:152082052-152082352	chrX	+	152082124	152082390	True	NM_001178108,NM_001178109,NM_001178106,NM_001178107,NM_001178113,NM_007150,NM_001178110,NM_001103150	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,+,+,-	ZNF185,ZNF185,ZNF185,ZNF185,ZNF185,ZNF185,ZNF185,PNMA5	595,595,595,595,4018,595,595,78421
chr15:89766567-89767597	chr15	+	89766834	89766922	True	NM_001113378,NM_000326	chr15,chr15	+,-	FANCI,RLBP1	20271,-1912
chr1:109938588-109939798	chr1	+	109938843	109939785	True	NM_001040709,NM_001205228,NM_002959	chr1,chr1,chr1	+,-,-	SYPL2,SORT1,SORT1	69314,-2864,828
chr2:40006093-40006347	chr2	+	40006246	40006338	True	NM_152390,NM_025264,NR_028102	chr2,chr2,chr2	+,-,-	TMEM178,THUMPD2,THUMPD2	-113262,128,128
chr11:61247221-61248433	chr11	+	61247383	61248389	True	NM_001136040,NM_145017,NM_001170753	chr11,chr11,chr11	-,+,+	CPSF7,C11orf66,C11orf66	-49919,195,195
chrY:9161049-9161429	chrY	+	9161195	9161315	True	NR_001547,NM_001164471	chrY,chrY	-,+	RBMY1A3P,TSPY4	-712,34136
chrX:57022522-57023813	chrX	+	57022582	57023500	True	NR_027139,NM_001010862,NR_015367	chrX,chrX,chrX	-,-,+	SPIN3,SPIN3,LOC550643	-594,-594,-266929
chr7:148895447-148895817	chr7	+	148895452	148895816	True	NM_001001661,NM_003575	chr7,chr7	-,+	ZNF425,ZNF282	-72014,-2926
chr20:4703634-4704469	chr20	+	4703670	4704234	True	NR_024267,NM_012409	chr20,chr20	-,+	PRNT,PRND	17130,-1165
chr1:173447064-173448459	chr1	+	173447247	173448466	True	NR_037845,NM_004905	chr1,chr1	-,+	LOC100506023,PRDX6	-953,-812
chr2:28739899-28740291	chr2	+	28739940	28740285	True	NM_017910,NM_153021	chr2,chr2	-,+	TRMT61B,PLB1	352941,-21053
chr17:43302816-43303557	chr17	+	43302894	43303586	True	NM_152343,NM_005892	chr17,chr17	-,+	C17orf46,FMNL1	35943,-3653
chr12:104442694-104443618	chr12	+	104442699	104443667	True	NM_013320,NM_031302	chr12,chr12	+,-	HCFC2,GLT8D2	14568,298
chr1:67020819-67021882	chr1	+	67020877	67021931	True	NM_005478,NM_032291	chr1,chr1	-,+	INSL5,SGIP1	245061,-21103
chr17:50235326-50235580	chr17	+	50235362	50235628	True	NM_001082534,NM_020178,NM_001082533,NM_016001	chr17,chr17,chr17,chr17	-,-,-,+	CA10,CA10,CA10,UTP18	1799,554,1583,-897516
chr22:38036847-38037136	chr22	+	38036871	38037185	True	NM_006498,NM_018957	chr22,chr22	-,+	LGALS2,SH3BP1	-60847,-1238
chr2:99345334-99346954	chr2	+	99345781	99346718	True	NM_012214,NM_014044	chr2,chr2	-,+	MGAT4A,UNC50	922,-120797
chr2:135679217-135680598	chr2	+	135679258	135680420	True	NM_058241,NM_001241,NR_037649,NR_036549	chr2,chr2,chr2,chr2	+,+,+,-	CCNT2,CCNT2,CCNT2,LOC100129961	-2918,-2918,-2918,-3082
chr10:27390208-27391626	chr10	+	27390370	27391350	True	NM_014915,NM_001172303	chr10,chr10	-,+	ANKRD26,MASTL	-943,52402
chr6:155770653-155771346	chr6	+	155770710	155771132	True	NM_015718,NM_001001346	chr6,chr6	-,+	NOX3,CLDN20	5955,-185616
chr12:120739773-120740343	chr12	+	120740045	120740390	True	NM_000928,NM_012240	chr12,chr12	-,+	PLA2G1B,SIRT4	25252,6
chr15:99055078-99056329	chr15	+	99055235	99056297	True	NM_182562,NM_000875	chr15,chr15	-,+	FAM169B,IGF1R	1375,136463
chr3:64008005-64008457	chr3	+	64008015	64008483	True	NM_014814,NM_001128149	chr3,chr3	-,+	PSMD6,ATXN7	687,-54646
chr15:41836739-41837497	chr15	+	41837122	41837540	True	NM_015540,NM_006293	chr15,chr15	-,+	RPAP1,TYRO3	-658,13679
chr5:172069081-172070151	chr5	+	172069205	172070099	True	NM_001142651,NM_004417	chr5,chr5	+,-	NEURL1B,DUSP1	-989,128154
chr11:130641545-130642901	chr11	+	130641614	130642916	True	NM_139055,NM_014758	chr11,chr11	+,-	ADAMTS15,SNX19	-322802,143516
chr8:79462726-79464029	chr8	+	79462732	79464022	True	NM_000880,NM_181839	chr8,chr8	-,+	IL7,PKIA	253793,-34449
chr7:131375479-131375987	chr7	+	131375495	131375783	True	NM_005397,NM_013255	chr7,chr7	-,+	PODXL,MKLN1	-134119,-362951
chr22:46442415-46443048	chr22	+	46442491	46442735	True	NM_018280,NR_027034,NR_027036	chr22,chr22,chr22	-,+,-	C22orf26,LOC150381,LOC100271722	7339,6990,-1743
chr19:5871858-5872725	chr19	+	5871958	5872593	True	NM_002034,NM_001017921	chr19,chr19	-,+	FUT5,VMAC	-1407,32258
chr1:222887703-222888089	chr1	+	222887872	222888102	True	NM_022831,NM_144695	chr1,chr1	-,+	AIDA,BROX	-2008,-2017
chr20:23498824-23499882	chr20	+	23498908	23499650	True	NM_080610,NR_001279	chr20,chr20	-,+	CST9L,CSTT	49786,132
chr2:152958931-152959630	chr2	+	152959229	152959367	True	NM_000726,NM_001005746,NM_052905,NM_001145798	chr2,chr2,chr2,chr2	-,-,+,-	CACNB4,CACNB4,FMNL2,CACNB4	-3636,-3994,232383,-3636
chr12:56471970-56472687	chr12	+	56472373	56472708	True	NM_001005915,NM_001130420,NM_001982	chr12,chr12,chr12	+,-,+	ERBB3,SMARCC2,ERBB3	1183,110694,1100
chr4:7043852-7044091	chr4	+	7043882	7044074	True	NM_153376,NM_152293,NR_033828	chr4,chr4,chr4	-,+,-	CCDC96,TADA2B,LOC100129931	704,1081,3934
chr6:131148567-131150039	chr6	+	131148752	131150009	True	NM_001195597,NM_001199389	chr6,chr6	+,-	LOC285733,EPB41L2	-258,141664
chr22:38902939-38903160	chr22	+	38902970	38903074	True	NM_006855,NM_001098504,NM_006386	chr22,chr22,chr22	+,-,-	KDELR3,DDX17,DDX17	-38938,-625,-625
chr12:121569473-121570087	chr12	+	121569497	121570087	True	NM_198213,NM_002562,NR_033949,NR_033948,NR_033952,NR_033953,NR_033950,NR_033951,NR_033956,NR_033954,NR_033955	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,+,+,+,+,+,+,+,+	OASL,P2RX7,P2RX7,P2RX7,P2RX7,P2RX7,P2RX7,P2RX7,P2RX7,P2RX7,P2RX7	-92717,543,543,543,543,534,543,543,543,543,543
chr9:139580440-139581020	chr9	+	139580452	139581017	True	NR_029695,NM_006412,NM_001012727	chr9,chr9,chr9	+,-,-	MIR126,AGPAT2,AGPAT2	-15449,944,944
chr6:42014302-42014881	chr6	+	42014471	42014927	True	NM_138572,NM_001136126,NM_001136017	chr6,chr6,chr6	+,-,-	TAF8,CCND3,CCND3	3323,1733,1733
chr19:11199915-11200189	chr19	+	11199927	11200041	True	NM_001195802,NM_001195803,NM_001195800,NM_000527,NM_001195798,NM_001195799,NM_182513	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,+,-	LDLR,LDLR,LDLR,LDLR,LDLR,LDLR,SPC24	0,0,0,0,0,0,66493
chr3:57090780-57091572	chr3	+	57090800	57091594	True	NM_181727,NM_001128615	chr3,chr3	+,-	SPATA12,ARHGEF3	2874,21792
chr16:48661282-48662484	chr16	+	48661473	48662526	True	NM_153029,NM_031490	chr16,chr16	-,+	N4BP1,LONP2	-17353,-383313
chr20:33102175-33103140	chr20	+	33102320	33103177	True	NM_080476,NM_014183	chr20,chr20	-,+	PIGU,DYNLRB1	161962,1026
chr1:155022049-155023060	chr1	+	155022075	155023037	True	NM_144622,NM_207191,NM_207196,NM_207197,NM_207194,NM_207195,NM_003815	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,+,+,+,+	DCST2,ADAM15,ADAM15,ADAM15,ADAM15,ADAM15,ADAM15	-15818,724,724,724,724,724,724
chr4:17809133-17810371	chr4	+	17809133	17810295	True	NM_017741,NM_022346	chr4,chr4	-,+	DCAF16,NCAPG	2136,2229
chr1:109631666-109632647	chr1	+	109631677	109632469	True	NM_020141,NM_005645	chr1,chr1	+,-	TMEM167B,TAF13	933,-13053
chr9:16872000-16872225	chr9	+	16872041	16872261	True	NM_017637,NM_001114395	chr9,chr9	-,+	BNC2,CNTLN	-1255,262776
chr17:25799445-25799683	chr17	+	25799480	25799557	True	NM_014238,NM_000625	chr17,chr17	+,-	KSR1,NOS2	-495,328049
chr9:139608039-139608423	chr9	+	139608127	139608437	True	NM_152421,NR_002975	chr9,chr9	+,-	FAM69B,SNORA43	-1154,12302
chr9:102692842-102693353	chr9	+	102692894	102693087	True	NM_017919,NM_015051	chr9,chr9	+,-	STX17,ERP44	-24030,168300
chr8:29116913-29117950	chr8	+	29117028	29117970	True	NM_015254,NM_024567	chr8,chr8	-,+	KIF13B,HMBOX1	2698,-368861
chr2:169763428-169764396	chr2	+	169763482	169764310	True	NM_001081686,NM_020675,NM_021176	chr2,chr2,chr2	+,-,+	G6PC2,SPC25,G6PC2	-5786,-16538,-5786
chr13:49019594-49020252	chr13	+	49019594	49019987	True	NM_005767,NM_000321	chr13,chr13	-,+	LPAR6,RB1	-754,-141766
chr12:53973190-53974008	chr12	+	53973348	53973628	True	NM_001130059,NM_134324	chr12,chr12	-,+	ATF7,TARBP2	21227,-78022
chr19:7074078-7075054	chr19	+	7074429	7075045	True	NM_001044388,NM_024341,NM_001164425,NM_001044387	chr19,chr19,chr19,chr19	+,+,-,+	ZNF557,ZNF557,MBD3L3,ZNF557	-5016,-5016,-15784,-5016
chr9:116841261-116841618	chr9	+	116841406	116841661	True	NM_032888,NM_001633	chr9,chr9	+,-	COL27A1,AMBP	76569,-654
chr3:109056040-109056616	chr3	+	109056113	109056660	True	NM_018189,NM_001145553	chr3,chr3	-,+	DPPA4,FLJ25363	93,72176
chr1:43647008-43647328	chr1	+	43647047	43647354	True	NM_001159936,NM_001167965,NM_001167966,NR_030778,NM_152498,NM_006824	chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,+,+,-	EBNA1BP2,WDR65,WDR65,WDR65,WDR65,EBNA1BP2	-8806,-9100,-9086,-9100,-9100,-9061
chr12:124017160-124017611	chr12	+	124017263	124017545	True	NR_037470,NM_178314	chr12,chr12	+,-	MIR3908,RILPL1	3410,770
chr2:10441544-10441789	chr2	+	10441543	10441835	True	NM_134421,NM_002149,NR_036222	chr2,chr2,chr2	+,+,-	HPCAL1,HPCAL1,MIR4261	1990,1204,-108746
chr1:43888544-43888816	chr1	+	43888566	43888864	True	NM_001190880,NM_015284	chr1,chr1	-,+	HYI,KIAA0467	30846,-16
chr15:40764829-40766024	chr15	+	40764837	40765691	True	NM_130468,NR_002208	chr15,chr15	+,-	CHST14,MRPL42P5	-1728,59109
chr7:73183976-73184203	chr7	+	73183987	73184195	True	NM_001306,NR_026690	chr7,chr7	-,+	CLDN3,WBSCR26	455,-34639
chr17:1533226-1533483	chr17	+	1533232	1533499	True	NM_001163673,NM_152346	chr17,chr17	+,-	WDR81,SLC43A2	86317,-1102
chr12:120932372-120933133	chr12	+	120932550	120933132	True	NM_003769,NM_001037495,NM_003746	chr12,chr12,chr12	-,+,+	SRSF9,DYNLL1,DYNLL1	-24992,726,726
chr1:57130838-57131560	chr1	+	57131038	57131604	True	NM_003713,NM_006252	chr1,chr1	-,+	PPAP2B,PRKAA2	-85781,-20102
chrX:153448513-153449068	chrX	+	153448519	153449075	True	NM_001586,NM_000513,NM_001048181	chrX,chrX,chrX	-,+,+	TEX28,OPN1MW,OPN1MW2	74429,-485,-485
chrX:153448513-153449068	chrX	+	153485637	153486193	False	NM_001586,NM_000513,NM_001048181	chrX,chrX,chrX	-,+,+	TEX28,OPN1MW,OPN1MW2	37311,-485,-485
chrX:153448513-153449068	chrX	+	153410110	153410665	False	NM_020061,NM_001110792	chrX,chrX	+,-	OPN1LW,MECP2	-436,-46922
chr17:26731571-26731991	chr17	+	26731622	26732034	True	NM_080669,NM_015077	chr17,chr17	-,+	SLC46A1,SARM1	1244,-32686
chr9:99146447-99146994	chr9	+	99146506	99146844	True	NM_007001,NM_014282	chr9,chr9	-,+	SLC35D2,HABP4	-514,65569
chr2:70149979-70150992	chr2	+	70150335	70151013	True	NM_001202513,NM_001202514,NM_002357,NM_152792	chr2,chr2,chr2,chr2	+,+,+,-	MXD1,MXD1,MXD1,ASPRV1	-8213,-8213,-8213,38434
chr6:157749555-157751021	chr6	+	157749927	157751050	True	NM_018452,NM_024630	chr6,chr6	-,+	C6orf35,ZDHHC14	-4674,51506
chr1:167686364-167687151	chr1	+	167686443	167686906	True	NM_003851,NM_024569,NM_001146191,NM_003953	chr1,chr1,chr1,chr1	-,+,+,+	CREG1,MPZL1,MPZL1,MPZL1	-163387,4280,4280,4280
chr6:90012432-90012867	chr6	+	90012568	90012730	True	NM_014942,NM_002043	chr6,chr6	+,-	ANKRD6,GABRR2	130166,12287
chr1:28842384-28843605	chr1	+	28843104	28843388	True	NM_001269,NM_001048195,NM_001048194,NR_003077	chr1,chr1,chr1,chr1	+,+,+,-	RCC1,RCC1,RCC1,SNORD99	1356,1356,1356,61996
chr9:33750045-33750283	chr9	+	33750050	33750328	True	NM_001197097,NR_023917,NM_007343,NM_001197098	chr9,chr9,chr9,chr9	+,-,+,+	PRSS3,PTENP1,PRSS3,PRSS3	135,-72632,135,490
chr13:51935005-51936569	chr13	+	51935032	51936586	True	NM_001039937,NM_001101320	chr13,chr13	-,+	INTS6,SERPINE3	90739,-19922
chr12:20543131-20544367	chr12	+	20543288	20544407	True	NM_000921,NM_021094	chr12,chr12	+,-	PDE3A,SLCO1A2	-21142,943475
chr16:29830581-29830885	chr16	+	29830656	29830868	True	NM_006319,NM_024516,NM_017458,NM_145239,NM_005115	chr16,chr16,chr16,chr16,chr16	-,+,+,+,+	CDIPT,C16orf53,MVP,PRRT2,MVP	43760,-3179,846,-7298,846
chr11:57425697-57426714	chr11	+	57425703	57426046	True	NM_145008,NM_006831,NM_001142597,NM_015457	chr11,chr11,chr11,chr11	-,+,+,+	YPEL4,CLP1,CLP1,ZDHHC5	-8286,-538,-538,9427
chr1:7826009-7827002	chr1	+	7826124	7827030	True	NM_006786,NM_004781	chr1,chr1	-,+	UTS2,VAMP3	86125,4298
chr10:135382411-135382620	chr10	+	135382491	135382557	True	NM_001143764,NR_033789,NM_001143763,NM_130784,NM_000773	chr10,chr10,chr10,chr10,chr10	-,-,-,-,+	SYCE1,SPRNP1,SYCE1,SYCE1,CYP2E1	-3353,955,-3353,369,-41675
chr10:135382411-135382620	chr10	+	135237696	135237779	False	NR_002934,NM_001012508	chr10,chr10	+,-	LOC619207,SPRN	29652,417
chr12:52993081-52994322	chr12	+	52993084	52994158	True	NM_002284,NM_080747,NM_001146226,NM_001146225	chr12,chr12,chr12,chr12	+,-,-,-	KRT86,KRT72,KRT72,KRT72	-297486,1214,1214,1214
chr1:161188584-161190086	chr1	+	161188708	161189964	True	NM_004106,NM_001643,NM_032174	chr1,chr1,chr1	+,-,+	FCER1G,APOA2,TOMM40L	-3679,3504,5868
chr13:111211819-111212101	chr13	+	111211942	111212128	True	NM_017817,NM_018210	chr13,chr13	-,+	RAB20,CARKD	1993,55879
chr12:1802243-1802858	chr12	+	1802345	1802530	True	NM_024551,NR_037422	chr12,chr12	+,-	ADIPOR2,MIR3649	-2156,-32799
chr16:85338199-85339483	chr16	+	85338225	85338883	True	NR_033984,NM_198491	chr16,chr16	+,-	LOC400548,FAM92B	-167520,-192111
chr2:55218211-55219925	chr2	+	55218573	55219680	True	NM_007008,NM_001135592	chr2,chr2	-,+	RTN4,RPS27A	17843,239358
chr15:69222135-69222398	chr15	+	69222136	69222368	True	NR_033672,NM_145658,NM_001184780,NR_033671,NM_006305	chr15,chr15,chr15,chr15,chr15	+,+,+,+,-	NOX5,SPESP1,NOX5,NOX5,ANP32A	470,470,470,495,-108875
chr14:77924719-77925123	chr14	+	77924905	77925169	True	NM_012111,NM_022067,NM_001193314,NM_001193315,NM_001193316,NM_001193317	chr14,chr14,chr14,chr14,chr14,chr14	+,-,-,-,-,-	AHSA1,VIPAR,VIPAR,VIPAR,VIPAR,VIPAR	-583,-922,-922,-922,-922,-922
chr8:85139386-85141088	chr8	+	85139640	85140909	True	NM_001100391,NM_001099670	chr8,chr8	+,-	RALYL,C8orf59	-42605,991797
chrX:13338085-13338873	chrX	+	13338112	13338905	True	NM_001167890,NM_001135995	chrX,chrX	+,-	EGFL6,ATXN3L	248788,40
chr16:21964763-21964975	chr16	+	21964810	21964996	True	NM_173806,NM_003366	chr16,chr16	-,+	PDZD9,UQCRC2	47485,-252
chr15:59277855-59278257	chr15	+	59277855	59278295	True	NM_024755,NM_017610	chr15,chr15	-,+	SLTM,RNF111	-52003,1569
chr7:100285499-100285715	chr7	+	100285604	100285682	True	NM_005273,NM_022574	chr7,chr7	+,-	GNB2,GIGYF1	-14292,1238
chr11:119233959-119234170	chr11	+	119233977	119234093	True	NM_171997,NR_034160	chr11,chr11	-,+	USP2,LOC100499227	849,18394
chr17:79873814-79874196	chr17	+	79873937	79874245	True	NM_016538,NR_015454,NM_002861,NM_001184917,NM_032711,NR_033682,NR_033683,NR_033681,NR_033685	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,-,-,-,-,-,-,-	SIRT7,LOC92659,PCYT2,PCYT2,MAFG,PCYT2,PCYT2,PCYT2,PCYT2	1863,11459,-4597,-4597,7213,-4597,-4860,-4597,-4860
chr16:1429950-1430393	chr16	+	1430094	1430342	True	NM_032520,NM_001193389,NM_023076	chr16,chr16,chr16	+,-,-	GNPTG,UNKL,UNKL	-28245,-410,-410
chr9:95948309-95948802	chr9	+	95948527	95948847	True	NM_004148,NM_006648	chr9,chr9	-,+	NINJ1,WNK2	-51957,-1369
chr17:76014507-76016390	chr17	+	76014645	76016320	True	NM_018996,NM_001127198	chr17,chr17	+,-	TNRC6C,TMC6	-14381,108591
chr7:99746629-99746915	chr7	+	99746780	99746846	True	NM_018275,NM_001008395	chr7,chr7	-,+	C7orf43,C7orf59	9506,-301
chr12:33139408-33139617	chr12	+	33139461	33139611	True	NM_004572,NM_012063	chr12,chr12	-,+	PKP2,DNM1L	-89681,-307375
chr4:2469772-2470108	chr4	+	2469870	2470086	True	NM_001172657,NM_001185010,NM_002938,NM_001185009	chr4,chr4,chr4,chr4	-,+,+,+	ZFYVE28,RNF4,RNF4,RNF4	-49500,708,708,1093
chr12:64236166-64236625	chr12	+	64236399	64236633	True	NM_020762,NM_173812	chr12,chr12	+,-	SRGAP1,DPY19L2	1907,-174045
chr4:68415922-68416684	chr4	+	68416276	68416739	True	NM_001812,NM_012108	chr4,chr4	-,+	CENPC1,STAP1	-5020,7706
chr1:157557179-157559036	chr1	+	157557359	157558968	True	NM_018240,NM_031282	chr1,chr1	+,-	KIRREL,FCRL4	404094,8957
chr17:59479438-59480379	chr17	+	59479548	59480376	True	NM_199290,NM_005994,NM_203425	chr17,chr17,chr17	-,+,+	NACA2,TBX2,C17orf82	188237,-2342,8735
chr7:45065885-45066360	chr7	+	45065886	45066126	True	NR_003697,NM_001029835	chr7,chr7	-,+	C7orf40,CCM2	-39627,1106
chr1:244211564-244211765	chr1	+	244211600	244211814	True	NM_005465,NM_006352,NM_205768	chr1,chr1,chr1	-,+,+	AKT3,ZNF238,ZNF238	-205047,4767,2746
chr2:222437252-222437489	chr2	+	222437370	222437478	True	NM_153038,NM_004438	chr2,chr2	+,-	CCDC140,EPHA4	725387,-360
chr2:97510505-97510847	chr2	+	97510507	97510861	True	NM_144994,NM_199078	chr2,chr2	-,+	ANKRD23,CNNM3	-749,-28567
chr15:74374399-74374644	chr15	+	74374529	74374597	True	NM_001130136,NM_001038640	chr15,chr15	+,-	ISLR2,GOLGA6A	47117,344
chr15:74374399-74374644	chr15	-	72947331	72947399	False	NR_002780,NM_018652	chr15,chr15	-,+	HIGD2B,GOLGA6B	31141,-344
chr15:74374399-74374644	chr15	-	75551192	75551260	False	NR_030360,NM_001164404	chr15,chr15	-,+	MIR631,GOLGA6C	94816,-344
chr15:74374399-74374644	chr15	-	75575469	75575537	False	NR_030360,NM_001145224	chr15,chr15	-,+	MIR631,GOLGA6D	70539,-338
chr2:96993424-96993655	chr2	+	96993423	96993677	True	NM_015341,NM_001163523,NM_001163524,NM_178495,NM_001008949,NM_014014	chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,+,-	NCAPH,ITPRIPL1,ITPRIPL1,ITPRIPL1,ITPRIPL1,SNRNP200	7806,-2405,-1529,-1539,-2412,-22116
chr22:31064495-31065425	chr22	+	31064516	31065346	True	NM_152511,NM_030758	chr22,chr22	-,+	DUSP18,OSBP2	-644,25446
chr4:39147280-39149004	chr4	+	39147607	39148575	True	NM_025132,NM_024943	chr4,chr4	+,-	WDR19,TMEM156	35448,-113566
chr10:99999917-100001821	chr10	+	100000140	100001558	True	NM_014472,NM_032211	chr10,chr10	+,-	C10orf28,LOXL4	-105820,26506
chr15:52039319-52040189	chr15	+	52039948	52040126	True	NM_001143917,NM_014548,NM_153374,NM_001142885	chr15,chr15,chr15,chr15	-,+,-,+	LYSMD2,TMOD2,LYSMD2,TMOD2	3586,3631,-9628,3631
chr21:31300111-31301548	chr21	+	31300296	31301537	True	NM_175611,NR_027021	chr21,chr21	-,+	GRIK1,GRIK1-AS1	10795,-179853
chr19:10125424-10126226	chr19	+	10125619	10125851	True	NM_015719,NM_015725	chr19,chr19	-,+	COL5A3,RDH8	-4472,-1745
chr11:124931369-124932622	chr11	+	124931389	124932492	True	NM_198277,NM_001080546,NM_001145290	chr11,chr11,chr11	+,-,+	SLC37A2,TMEM218,SLC37A2	520,40770,520
chr11:129874139-129874522	chr11	+	129874261	129874548	True	NM_199437,NR_024233,NM_020228	chr11,chr11,chr11	-,+,-	PRDM10,NCRNA00167,PRDM10	-1531,-1797,-1531
chr1:26392904-26393815	chr1	+	26392978	26393850	True	NR_026685,NM_032588	chr1,chr1	+,-	PDIK1L,TRIM63	43805,321
chr19:56109099-56110653	chr19	+	56109471	56110012	True	NM_153219,NM_032836	chr19,chr19	+,-	ZNF524,FIZ1	1717,932
chrX:70472825-70473818	chrX	+	70472993	70473865	True	NM_005096,NM_001145408,NM_001171163,NM_001171162,NM_000166,NM_201599	chrX,chrX,chrX,chrX,chrX,chrX	-,+,-,-,+,-	ZMYM3,NONO,ZMYM3,ZMYM3,GJB1,ZMYM3	684,29176,684,1232,-29988,223
chr7:5598737-5599079	chr7	+	5598857	5598919	True	NM_001101,NM_003088	chr7,chr7	-,+	ACTB,FSCN1	-28625,33534
chr11:62430136-62430738	chr11	+	62430180	62430772	True	NM_030628,NR_004390,NM_024099,NM_001085372,NM_001043229	chr11,chr11,chr11,chr11,chr11	-,+,-,+,+	INTS5,SNORA57,C11orf48,C11orf83,METTL12	-9406,2121,8519,8353,2006
chr8:30891529-30892477	chr8	+	30891727	30892401	True	NM_013357,NM_000553,NM_001015508	chr8,chr8,chr8	-,+,-	PURG,WRN,PURG	-1410,-1007,-496
chr4:2939356-2940836	chr4	+	2939419	2940666	True	NR_015453,NM_001120,NM_001146069	chr4,chr4,chr4	+,-,-	C4orf10,MFSD10,MFSD10	-2193,-3455,-2833
chr1:187186637-187187747	chr1	+	187186835	187187778	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-537276,-388868
chr3:119426393-119426982	chr3	+	119426397	119426708	True	NM_033364,NM_005694	chr3,chr3	+,-	C3orf15,COX17	-4579,-30154
chr1:16938778-16939417	chr1	+	16938939	16939355	True	NR_027504,NM_017940	chr1,chr1	+,-	MST1P2,NBPF1	32713,677
chr7:29604089-29604474	chr7	+	29604108	29604406	True	NR_024278,NM_175887	chr7,chr7	-,+	LOC646762,PRR15	120398,-733
chr21:40752804-40753022	chr21	+	40752861	40753063	True	NM_004627,NM_004965,NM_001146218	chr21,chr21,chr21	+,-,+	WRB,HMGN1,WRB	-699,-31814,6628
chr2:68689210-68689648	chr2	+	68689220	68689423	True	NM_173545,NM_001024680	chr2,chr2	+,-	APLF,FBXO48	5267,5028
chr10:112337240-112337922	chr10	+	112337381	112337685	True	NM_005871,NM_005445	chr10,chr10	-,+	SMNDC1,SMC3	-272674,-9991
chr19:14941951-14942347	chr19	+	14942000	14942246	True	NM_017506,NM_012377	chr19,chr19	-,+	OR7A5,OR7C2	-2724,110054
chr1:20812400-20812704	chr1	+	20812589	20812729	True	NM_207334,NM_018584	chr1,chr1	+,-	FAM43B,CAMK2N1	66202,49
chr1:24300572-24301120	chr1	+	24300782	24300960	True	NM_006625,NR_034035,NM_054016,NM_017761,NM_001191009,NM_001191006,NM_001191007,NM_001191005	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,-,-,-	SRSF10,SRSF10,SRSF10,PNRC2,SRSF10,SRSF10,SRSF10,SRSF10	6043,6043,6043,-14533,6043,6043,6043,6043
chr1:100339283-100339771	chr1	+	100339282	100339717	True	NM_000645,NM_001013660	chr1,chr1	+,-	AGL,FRRS1	-12572,-107933
chr2:70313752-70314012	chr2	+	70313765	70313951	True	NM_006196,NR_033872	chr2,chr2	+,-	PCBP1,LOC400960	633,246
chr12:49260689-49261168	chr12	+	49260991	49261125	True	NM_014470,NM_033124	chr12,chr12	-,+	RND1,CCDC65	-1338,36767
chr2:176979069-176979602	chr2	+	176979161	176979651	True	NM_002148,NM_014213,NM_001080458,NM_021192	chr2,chr2,chr2,chr2	+,+,-,+	HOXD10,HOXD9,EVX2,HOXD11	1840,7761,-30471,-7128
chr15:22709335-22709944	chr15	+	22709341	22709613	True	NR_027407,NM_001001413	chr15,chr15	-,+	GOLGA8DP,GOLGA6L1	6165,26632
chr1:24036341-24036997	chr1	+	24036358	24036908	True	NM_001199802,NM_001127621	chr1,chr1	+,-	RPL11,GALE	-18141,89202
chr4:188911488-188912625	chr4	+	188911739	188912046	True	NM_173553,NM_174900	chr4,chr4	-,+	TRIML2,ZFP42	114421,4878
chr6:4021154-4021458	chr6	+	4021156	4021437	True	NM_173563,NM_003913	chr6,chr6	-,+	C6orf146,PRPF4B	58071,131
chr12:25655389-25655844	chr12	+	25655394	25655882	True	NM_152590,NM_001001660	chr12,chr12	-,+	IFLTD1,LYRM5	50346,-307304
chr12:11326442-11327479	chr12	+	11326732	11327455	True	NR_036583,NR_037918	chr12,chr12	+,-	LOC100129361,PRH1-PRR4	-3013,-2508
chr12:83081343-83081604	chr12	+	83081403	83081609	True	NM_152588,NR_033192	chr12,chr12	+,-	TMTC2,CCDC59	-520,-328819
chr9:118246307-118247772	chr9	+	118246443	118247719	True	NM_017418,NM_002160	chr9,chr9	+,-	DEC1,TNC	-342405,-365957
chr22:19262799-19264213	chr22	+	19262851	19264060	True	NM_001835,NM_053006	chr22,chr22	-,+	CLTCL1,TSSK2	15229,-144581
chr14:36982347-36982687	chr14	+	36982357	36982669	True	NM_003317,NM_006194,NM_001101341,NM_001079668	chr14,chr14,chr14,chr14	-,+,-,-	NKX2-1,PAX9,SFTA3,NKX2-1	6284,144103,371,6811
chr11:67805631-67806082	chr11	+	67805745	67806113	True	NM_030930,NM_006019,NM_002496,NM_006053	chr11,chr11,chr11,chr11	-,+,+,+	UNC93B1,TCIRG1,NDUFS8,TCIRG1	-34152,348,-7712,4333
chr22:22339536-22341254	chr22	+	22339583	22341126	True	NM_007128,NM_003935	chr22,chr22	+,-	VPREB1,TOP3B	258073,-2436
chr12:49991562-49993250	chr12	+	49991876	49993298	True	NM_012272,NR_027450,NM_032130	chr12,chr12,chr12	+,-,-	PRPF40B,FAM186B,FAM186B	24104,6162,6185
chr17:67306538-67307721	chr17	+	67306644	67307491	True	NM_018672,NM_002758	chr17,chr17	-,+	ABCA5,MAP2K6	4342,103346
chr21:39643234-39643884	chr21	+	39643241	39643905	True	NM_005867,NM_170737	chr21,chr21	-,+	DSCR4,KCNJ15	-149787,523
chr8:60031374-60031836	chr8	+	60031400	60031708	True	NM_005625,NM_014729	chr8,chr8	+,-	SDCBP,TOX	-565723,111
chr17:41044831-41045175	chr17	+	41044976	41045072	True	NM_000151,NR_027254	chr17,chr17	+,-	G6PC,LOC388387	7742,5729
chr5:55413439-55414372	chr5	+	55413982	55414182	True	NM_024669,NM_139017	chr5,chr5	-,+	ANKRD55,IL31RA	115060,-266700
chr6:47621829-47622045	chr6	+	47621833	47622035	True	NM_153839,NM_014452	chr6,chr6	+,-	GPR111,TNFRSF21	2290,-344153
chr1:110754869-110755371	chr1	+	110754877	110755409	True	NR_036437,NM_001039574,NR_036595,NM_004978	chr1,chr1,chr1,chr1	+,+,-,+	KCNC4,KCNC4,LOC440600,KCNC4	-1592,-1592,126434,-1592
chr6:35995960-35996357	chr6	+	35995967	35996285	True	NM_052961,NM_001193476,NM_001315,NM_139014,NM_139013,NM_139012,NM_138718	chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,-,+,+,+,+,-	SLC26A8,SLC26A8,MAPK14,MAPK14,MAPK14,MAPK14,SLC26A8	-3554,-3662,-564,-564,-564,-564,-3690
chr5:177434555-177434815	chr5	+	177434655	177434748	True	NM_006261,NM_001079527	chr5,chr5	-,+	PROP1,FAM153C	-11412,940
chr5:177434555-177434815	chr5	+	175489035	175489105	False	NM_032361,NM_001079529	chr5,chr5	-,+	THOC3,FAM153B	-93490,22803
chr5:177434555-177434815	chr5	-	177209117	177209187	False	NR_003615,NM_173663	chr5,chr5	+,-	LOC728554,FAM153A	93074,-1612
chrX:44203710-44204688	chrX	+	44203784	44204353	True	NM_022076,NM_025184	chrX,chrX	+,-	DUSP21,EFHC2	498895,-861
chr8:24298628-24299608	chr8	+	24298628	24299404	True	NM_003817,NM_006158	chr8,chr8	+,-	ADAM7,NEFL	-178,514777
chr3:46903378-46904967	chr3	+	46903810	46904802	True	NM_000316,NM_000258	chr3,chr3	+,-	PTH1R,MYL3	14433,221
chr5:96133950-96135721	chr5	+	96134212	96135688	True	NR_033798,NM_001040458,NM_016442	chr5,chr5,chr5	+,-,-	CAST,ERAP1,ERAP1	-55019,8254,8254
chr11:86506520-86507403	chr11	+	86506569	86507213	True	NM_007173,NM_001161586	chr11,chr11	+,-	PRSS23,ME3	4277,-122891
chr12:4220696-4222362	chr12	+	4220819	4222042	True	NM_001759,NM_020367	chr12,chr12	+,-	CCND2,PARP11	160859,-238211
chr17:47025294-47025750	chr17	+	47025399	47025561	True	NM_023079,NM_007241	chr17,chr17	+,-	UBE2Z,SNF8	-39719,-3245
chr17:72270419-72270840	chr17	+	72270517	72270875	True	NR_026914,NM_001172810,NM_023036	chr17,chr17,chr17	-,+,+	MGC16275,DNAI2,DNAI2	-61057,-182,-182
chr21:36043221-36043721	chr21	+	36043230	36043770	True	NM_004414,NM_053277	chr21,chr21	-,+	RCAN1,CLIC6	-55848,-1593
chr7:138883058-138883918	chr7	+	138883324	138883940	True	NM_173569,NM_024625	chr7,chr7	+,-	UBN2,ZC3HAV1	32290,-88859
chr19:54021548-54022805	chr19	+	54021978	54022842	True	NM_018555,NR_002938	chr19,chr19	+,-	ZNF331,LOC284379	1334,83959
chrX:73164388-73165797	chrX	+	73164440	73165581	True	NR_001564,NR_024582	chrX,chrX	-,+	XIST,NCRNA00183	-91852,-333
chr21:43913298-43914900	chr21	+	43913334	43914798	True	NM_080860,NM_018964	chr21,chr21	-,+	RSPH1,SLC37A1	1653,4943
chr17:76779697-76781392	chr17	+	76779906	76781358	True	NM_017456,NM_030968,NM_004762	chr17,chr17,chr17	-,+,-	CYTH1,C1QTNF1,CYTH1	-1530,238892,-1530
chr12:26112459-26112661	chr12	+	26112529	26112697	True	NM_001164748,NR_036188,NM_007211	chr12,chr12,chr12	+,-,+	RASSF8,MIR4302,RASSF8	-616,-85517,-616
chrX:132163058-132164523	chrX	+	132163127	132164531	True	NM_001042452,NM_031907	chrX,chrX	+,-	MST4,USP26	-1005555,-827
chr3:93736953-93737655	chr3	+	93737107	93737550	True	NR_033427,NM_001001850	chr3,chr3	+,-	ARL13B,STX19	-38186,9954
chr12:56095085-56096055	chr12	+	56095090	56095764	True	NM_001144996,NM_002206,NM_001487	chr12,chr12,chr12	-,-,+	ITGA7,ITGA7,BLOC1S1	5981,5981,14053
chr12:109746980-109747191	chr12	+	109747007	109747099	True	NM_213596,NM_001101421	chr12,chr12	-,+	FOXN4,MYO1H	-8,79424
chr12:5504996-5505232	chr12	+	5505003	5505267	True	NM_020373,NM_001102654	chr12,chr12	-,+	ANO2,NTF3	550181,36012
chr5:10762927-10763404	chr5	+	10763024	10763430	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-198641,-1637
chr9:116356387-116356860	chr9	+	116356549	116356841	True	NM_017443,NM_144489	chr9,chr9	-,+	POLE3,RGS3	-183520,-400
chr2:43038537-43038883	chr2	+	43038586	43038808	True	NM_020744,NM_012205	chr2,chr2	+,-	MTA3,HAAO	-242966,-18835
chr19:1650046-1650657	chr19	+	1650053	1650629	True	NM_003200,NM_001136139,NM_001080488	chr19,chr19,chr19	-,-,+	TCF3,TCF3,ONECUT3	1747,-45,103032
chr20:5091547-5092109	chr20	+	5091852	5091926	True	NM_001009923,NM_182649,NM_001009925,NM_001009924,NR_028370,NM_014145	chr20,chr20,chr20,chr20,chr20,chr20	-,-,-,-,+,-	C20orf30,PCNA,C20orf30,C20orf30,PCNA-AS1,C20orf30	1863,8777,1863,1863,8305,1863
chr14:74019133-74020161	chr14	+	74019192	74019752	True	NM_203309,NM_001037161	chr14,chr14	-,+	HEATR4,ACOT1	5949,-15315
chr14:74019133-74020161	chr14	+	74051379	74051429	False	NM_152331,NM_203309	chr14,chr14	+,-	ACOT4,HEATR4	6980,-25728
chr5:41932831-41933972	chr5	+	41932910	41933786	True	NM_033484,NM_012176,NM_000436	chr5,chr5,chr5	+,+,-	FBXO4,FBXO4,OXCT1	-7605,-7605,-62119
chr12:8849259-8849704	chr12	+	8849289	8849743	True	NM_003480,NM_020734	chr12,chr12	-,+	MFAP5,RIMKLB	-33856,774
chr16:3493806-3494173	chr16	+	3493810	3494168	True	NM_001083601,NM_152457	chr16,chr16	+,-	NAT15,ZNF597	-193,-320
chr5:10662912-10663182	chr5	+	10662966	10663162	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-98584,98275
chr16:70381890-70382248	chr16	+	70381898	70382213	True	NM_018332,NM_001605	chr16,chr16	+,-	DDX19A,AARS	-1132,-58486
chr13:103349331-103350291	chr13	+	103349337	103350087	True	NM_003291,NM_001010977	chr13,chr13	+,-	TPP2,METTL21C	-100102,-2483
chr8:86935591-86937008	chr8	+	86935688	86937029	True	NR_003594,NM_152565	chr8,chr8	-,+	REXO1L2P,ATP6V0D2	-95517,174109
chr3:123813734-123814424	chr3	+	123813739	123814398	True	NR_028136,NM_003947,NM_001024660,NM_017578	chr3,chr3,chr3,chr3	+,+,+,-	KALRN,KALRN,KALRN,ROPN1	-232,-232,-232,-103540
chr11:130297425-130297711	chr11	+	130297488	130297564	True	NM_007037,NM_139055	chr11,chr11	-,+	ADAMTS8,ADAMTS15	1025,21304
chr1:179564818-179566557	chr1	+	179564830	179566409	True	NM_001199085,NM_173533,NM_001199089,NM_014625,NM_001199091,NM_001199092	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,-,+,+	TDRD5,TDRD5,TDRD5,NPHS2,TDRD5,TDRD5	-4126,-4126,-3894,-19746,-4135,8952
chr5:52876822-52877444	chr5	+	52876973	52877292	True	NR_030307,NM_002495	chr5,chr5	-,+	MIR581,NDUFS4	370194,-20559
chr9:139583304-139583598	chr9	+	139583388	139583542	True	NR_029695,NM_006412,NM_001012727	chr9,chr9,chr9	+,-,-	MIR126,AGPAT2,AGPAT2	-18385,-1477,-1477
chr1:28198543-28199030	chr1	+	28198627	28198825	True	NM_001039477,NM_004848,NM_002946,NM_001105556	chr1,chr1,chr1,chr1	+,+,-,+	C1orf38,C1orf38,RPA2,C1orf38	229,229,42461,229
chr6:133561366-133561991	chr6	+	133561378	133561900	True	NM_172105,NM_052831,NM_004100,NM_172103	chr6,chr6,chr6,chr6	+,-,+,+	EYA4,C6orf192,EYA4,EYA4	594,-441631,594,594
chr1:28157785-28158270	chr1	+	28157912	28158294	True	NM_014110,NR_002997,NM_002713,NM_138558,NM_002946	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	PPP1R8,SCARNA1,PPP1R8,PPP1R8,RPA2	-713,2617,-640,-640,82993
chr1:75199494-75201471	chr1	+	75199500	75201431	True	NM_001134759,NM_001162916,NM_001130043,NM_001130042,NR_027962,NM_138467,NM_001889	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,+,-,-,+,+,-	CRYZ,TYW3,CRYZ,CRYZ,TYW3,TYW3,CRYZ	-408,-715,-408,-408,-689,-711,-408
chr14:53163896-53165224	chr14	+	53164105	53164922	True	NM_002806,NM_014584	chr14,chr14	+,-	PSMC6,ERO1L	8973,-1686
chr3:54962418-54963388	chr3	+	54962527	54963321	True	NM_018398,NM_020678	chr3,chr3	+,-	CACNA2D3,LRTM1	-805885,-455
chr21:43187740-43188430	chr21	+	43187845	43188478	True	NR_024028,NM_020639	chr21,chr21	+,-	NCRNA00112,RIPK4	-51300,-596
chr17:19552601-19553383	chr17	+	19552600	19553189	True	NM_001099646,NM_000382,NM_001031806	chr17,chr17,chr17	-,+,+	SLC47A2,ALDH3A2,ALDH3A2	66913,-587,-587
chr19:41285219-41286073	chr19	+	41285264	41286031	True	NR_037791,NM_198476,NM_016154,NR_037775,NM_001202553,NM_006533	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+	RAB4B-EGLN2,C19orf54,RAB4B,MIA-RAB4B,MIA,MIA	-1193,-29436,-1193,-3875,-4235,-4035
chr8:67090099-67090452	chr8	+	67090113	67090339	True	NM_000756,NM_184087	chr8,chr8	-,+	CRH,TRIM55	557,-50886
chr12:7945667-7946634	chr12	+	7945789	7946416	True	NM_024865,NM_203503	chr12,chr12	+,-	NANOG,CLEC4C	-3850,-43720
chr19:55691750-55693467	chr19	+	55691754	55693270	True	NM_017729,NM_003180	chr19,chr19	+,-	EPS8L1,SYT5	-100045,-34
chr2:91759493-91760229	chr2	+	91759548	91759964	True	NR_003503,NR_027238	chr2,chr2	+,-	GGT8P,LOC654342	203403,88061
chr19:3867344-3868332	chr19	+	3867385	3868280	True	NM_001145640,NM_033064,NM_015174,NR_027149	chr19,chr19,chr19,chr19	-,+,-,-	ZFR2,ATCAY,ZFR2,ZFR2	797,12337,797,797
chr19:4455411-4455735	chr19	+	4455410	4455620	True	NM_025241,NM_001171091,NM_001001520	chr19,chr19,chr19	-,-,+	UBXN6,UBXN6,HDGFRP2	2221,-115,16634
chr17:72543750-72545150	chr17	+	72543911	72545069	True	NM_152460,NM_006678	chr17,chr17	+,-	C17orf77,CD300C	35987,-1629
chr8:145597070-145597420	chr8	+	145597135	145597431	True	NM_024555,NM_174922	chr8,chr8	-,+	FBXL6,ADCK5	-15003,299
chr10:91740477-91740728	chr10	+	91740481	91740591	True	NR_026835,NM_016195	chr10,chr10	-,+	FLJ37201,KIF20B	-282796,-279165
chr3:55522248-55522576	chr3	+	55522263	55522617	True	NM_003392,NM_001012506	chr3,chr3	-,+	WNT5A,CCDC66	-932,1068566
chr2:189648526-189650467	chr2	+	189648801	189650386	True	NM_052952,NM_000090	chr2,chr2	-,+	DIRC1,COL3A1	4503,188712
chr6:74163902-74164185	chr6	+	74164032	74164174	True	NM_001123226,NM_012123,NM_133645,NM_138441	chr6,chr6,chr6,chr6	+,+,+,-	MTO1,MTO1,MTO1,MB21D1	7279,7279,7279,-1989
chr6:7317287-7317882	chr6	+	7317515	7317919	True	NM_031480,NM_003144	chr6,chr6	+,-	RIOK1,SSR1	72142,-3974
chr12:108908360-108908641	chr12	+	108908527	108908599	True	NM_007076,NM_014706	chr12,chr12	+,-	FICD,SART3	451,46616
chr2:208490956-208491229	chr2	+	208490994	208491066	True	NM_145280,NM_001127395,NM_001142300	chr2,chr2,chr2	-,-,+	METTL21A,METTL21A,CCNYL1	-1298,-1021,85197
chr1:19182452-19183976	chr1	+	19182619	19184019	True	NM_001135254,NM_152232	chr1,chr1	+,-	PAX7,TAS1R2	-225170,2186
chr20:62886932-62887207	chr20	+	62887020	62887228	True	NM_001104925,NM_005286	chr20,chr20	+,-	PCMTD2,NPBWR2	-23,-148836
chr1:154942526-154942782	chr1	+	154942624	154942684	True	NM_003029,NM_001826,NR_036212,NR_024163,NM_138300,NM_001130041,NM_001130040,NM_183001,NM_001202859	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,+,-,-,-,-,-	SHC1,CKS1B,MIR4258,CKS1B,PYGO2,SHC1,SHC1,SHC1,SHC1	4325,4433,5484,4433,-8366,4325,589,589,4325
chr10:924611-925701	chr10	+	924675	925381	True	NM_015155,NM_012341	chr10,chr10	-,+	LARP4B,GTPBP4	6381,108967
chr6:43211666-43213372	chr6	+	43211730	43213083	True	NM_032538,NM_199184	chr6,chr6	+,-	TTBK1,C6orf108	-559,-14519
chr11:74107756-74108912	chr11	+	74108009	74108908	True	NM_173582,NM_006591	chr11,chr11	-,+	PGM2L1,POLD3	644,194720
chr16:46780654-46781109	chr16	+	46780909	46781087	True	NM_182493,NR_037620	chr16,chr16	-,+	MYLK3,ORC6	1184,-57402
chr17:40119501-40119950	chr17	+	40119586	40119969	True	NM_033133,NM_198830	chr17,chr17	+,-	CNP,ACLY	-878,-44314
chr22:24821329-24821803	chr22	+	24821362	24821762	True	NR_028484,NM_000675	chr22,chr22	-,+	C22orf45,ADORA2A	69071,1767
chr20:39862351-39863861	chr20	+	39862454	39863616	True	NM_015035,NM_182811	chr20,chr20	-,+	ZHX3,PLCG1	65175,-96351
chrX:150155275-150155656	chrX	+	150155457	150155635	True	NM_005342,NM_134446	chrX,chrX	+,-	HMGB3,CD99L2	-3755,-88168
chr16:85214291-85214674	chr16	+	85214422	85214686	True	NR_033984,NM_198491	chr16,chr16	+,-	LOC400548,FAM92B	-43720,-68308
chr5:136839962-136841355	chr5	+	136840135	136841320	True	NM_004598,NR_002713	chr5,chr5	-,+	SPOCK1,NPY6R	-5117,295561
chr11:111249748-111249965	chr11	+	111249848	111249968	True	NM_001136105,NM_006235	chr11,chr11	+,-	C11orf93,POU2AF1	-79923,239
chr7:138344092-138344620	chr7	+	138344492	138344646	True	NM_174959,NM_001085429	chr7,chr7	-,+	SVOPL,TMEM213	4373,138092
chr9:139781666-139781981	chr9	+	139781700	139781962	True	NM_153200,NM_021138	chr9,chr9	-,+	EDF1,TRAF2	-20962,-786
chr20:30100478-30101284	chr20	+	30100673	30101046	True	NM_001037500,NM_178582,NM_178580,NM_030789,NM_178581	chr20,chr20,chr20,chr20,chr20	-,+,+,+,+	DEFB124,HM13,HM13,HM13,HM13	-39857,1194,1194,1194,1194
chr22:36925423-36926098	chr22	+	36925436	36925774	True	NM_003753,NM_145343	chr22,chr22	-,+	EIF3D,APOL1	-159,-276370
chr17:78449422-78449677	chr17	+	78449434	78449520	True	NM_002522,NM_173627	chr17,chr17	-,+	NPTX1,FLJ35220	934,-60518
chr13:114149289-114149883	chr13	+	114149464	114149849	True	NM_001014283,NM_017905	chr13,chr13	-,+	DCUN1D2,TMCO3	-4441,-4215
chr19:4638602-4639217	chr19	+	4638720	4639072	True	NM_152362,NM_001167942,NM_019107	chr19,chr19,chr19	+,+,-	TNFAIP8L1,TNFAIP8L1,C19orf10	454,956,31393
chr1:155949110-155949635	chr1	+	155949247	155949577	True	NM_001162383,NM_004723,NM_181885,NM_001162384	chr1,chr1,chr1,chr1	-,-,+,-	ARHGEF2,ARHGEF2,RXFP4,ARHGEF2	-911,-1281,-37825,-911
chr14:91525606-91526118	chr14	+	91525716	91526127	True	NM_182398,NM_004755,NM_001102366	chr14,chr14,chr14	-,-,+	RPS6KA5,RPS6KA5,C14orf159	917,917,54229
chr9:136024797-136025004	chr9	+	136024812	136025042	True	NR_001275,NM_001042368	chr9,chr9	+,-	CELP,RALGDS	-66937,-224
chr8:82751926-82753430	chr8	+	82751943	82753237	True	NM_022133,NM_152284,NM_152836,NM_152837	chr8,chr8,chr8,chr8	-,+,-,-	SNX16,CHMP4C,SNX16,SNX16	1336,-107314,1336,1336
chr1:71512683-71512935	chr1	+	71512724	71512938	True	NR_028294,NR_028293,NR_028292,NM_001126044,NM_153742,NM_198719,NM_198718,NM_198715,NM_198714,NM_198717,NM_198716	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,+,-,-,-,-,-,-	PTGER3,PTGER3,PTGER3,PTGER3,CTH,PTGER3,PTGER3,PTGER3,PTGER3,PTGER3,PTGER3	603,603,603,603,-635874,603,603,603,603,603,603
chr4:155527016-155528329	chr4	+	155527059	155528329	True	NM_021870,NM_005141,NM_000509	chr4,chr4,chr4	-,+,-	FGG,FGB,FGG	5623,-42978,5623
chr10:71564841-71566125	chr10	+	71564984	71565897	True	NM_080802,NM_080800,NM_001130103,NM_080801,NM_080798,NM_020999,NM_080805	chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,-,+	COL13A1,COL13A1,COL13A1,COL13A1,COL13A1,NEUROG3,COL13A1	-3391,-3391,-3391,-3391,-3391,-231774,-3391
chrX:17394542-17394778	chrX	+	17394639	17394719	True	NR_033348,NM_198270	chrX,chrX	-,+	RAI2,NHS	484278,-1147
chr5:170848575-170849363	chr5	+	170848579	170849411	True	NM_003862,NR_037474	chr5,chr5	+,-	FGF18,MIR3912	-1963,-34815
chr17:79990455-79990726	chr17	+	79990459	79990695	True	NM_016286,NM_005052,NM_001195218,NM_144998,NM_144999	chr17,chr17,chr17,chr17,chr17	-,+,-,-,+	DCXR,RAC3,DCXR,STRA13,LRRC45	4928,-978,4928,-9686,-9230
chr16:70557877-70558225	chr16	+	70557952	70558241	True	NM_012426,NM_015386,NR_003696,NR_037420,NM_001195139	chr16,chr16,chr16,chr16,chr16	+,-,+,+,-	SF3B3,COG4,SNORD111B,MIR3647,COG4	-312,-495,5163,5160,-495
chr14:65459236-65460732	chr14	+	65459236	65460461	True	NM_002028,NM_198686	chr14,chr14	+,-	FNTB,RAB15	-5788,-20361
chr1:110166918-110167150	chr1	+	110166918	110167106	True	NM_139156,NM_005272,NM_203404,NM_004037	chr1,chr1,chr1,chr1	+,-,+,+	AMPD2,GNAT2,AMPD2,AMPD2	-4510,-11213,942,-3693
chrX:139588930-139589707	chrX	+	139589020	139589640	True	NR_028345,NM_005634	chrX,chrX	+,-	RP1-177G6.2,SOX3	202283,-1795
chr9:139100751-139101070	chr9	+	139100758	139101006	True	NM_015597,NM_014564,NM_178138	chr9,chr9,chr9	+,-,-	GPSM1,LHX3,LHX3	120925,-5754,-3803
chr17:31322126-31322543	chr17	+	31322188	31322265	True	NM_173847,NM_015194	chr17,chr17	+,-	SPACA3,MYO1D	-3359,-118286
chr1:172631497-172631997	chr1	+	172631520	172632040	True	NM_153747,NM_000639	chr1,chr1	-,+	PIGC,FASLG	-218290,-3386
chr1:204656851-204658435	chr1	+	204656918	204658256	True	NM_201630,NM_001005389,NM_006338	chr1,chr1,chr1	-,+,-	LRRN2,NFASC,LRRN2	-2321,139525,-2437
chr2:27532411-27532669	chr2	+	27532421	27532636	True	NM_003353,NM_187841	chr2,chr2	-,+	UCN,TRIM54	-1291,-27175
chr16:3061380-3061985	chr16	+	3061836	3062028	True	NM_021195,NM_020982,NM_016639	chr16,chr16,chr16	-,+,+	CLDN6,CLDN9,TNFRSF12A	6210,428,8284
chr17:60559790-60561277	chr7	+	128175525	128175981	False	NM_183243,NM_018396	chr7,chr7	-,+	IMPDH1,METTL2B	-125489,-58793
chr17:60559790-60561277	chr17	+	60560230	60560769	True	NR_027486,NM_001112707,NM_006852	chr17,chr17,chr17	-,+,+	TBC1D3P2,TLK2,TLK2	-207214,-3895,-3895
chr1:225840069-225840269	chr1	+	225840096	225840188	True	NM_001130440,NM_018212,NM_001008493	chr1,chr1,chr1	+,-,-	SRP9,ENAH,ENAH	125326,707,707
chr19:54761820-54762407	chr19	+	54761927	54762325	True	NM_001013,NM_001081442,NM_001081443,NM_006840	chr19,chr19,chr19,chr19	+,-,-,-	RPS9,LILRB5,LILRB5,LILRB5	-57259,-760,-760,-760
chr5:148206451-148206843	chr5	+	148206498	148206882	True	NM_000024,NM_000870	chr5,chr5	+,-	ADRB2,HTR4	-393,-172759
chr15:90451707-90452186	chr15	+	90451796	90451870	True	NM_182616,NM_198526,NM_001199058	chr15,chr15,chr15	-,+,-	C15orf38,ZNF710,C15orf38-AP3S2	4402,92881,4402
chr1:93543649-93544660	chr1	+	93543680	93544653	True	NM_001167830,NM_001164392,NM_001164393,NM_007358,NM_001164391	chr1,chr1,chr1,chr1,chr1	-,+,+,+,+	TMED5,MTF2,MTF2,MTF2,MTF2	101643,138,138,138,138
chr11:126172348-126172946	chr11	+	126172548	126172797	True	NM_014026,NM_003139	chr11,chr11	+,-	DCPS,SRPR	849,-33671
chr13:33161791-33163629	chr13	+	33161964	33163653	True	NM_033111,NM_015032	chr13,chr13	-,+	N4BP2L2,PDS5B	-49028,-1453
chr11:65626750-65626982	chr11	+	65626913	65627027	True	NM_025128,NM_005507	chr11,chr11	+,-	MUS81,CFL1	844,-1109
chr19:54493641-54494552	chr19	+	54494399	54494487	True	NM_145814,NM_145815,NM_198481,NR_030632,NM_031897	chr19,chr19,chr19,chr19,chr19	+,+,-,+,+	CACNG6,CACNG6,VSTM1,MIR935,CACNG6	1054,1054,72770,-8889,1054
chr1:204131495-204131962	chr1	+	204131506	204131998	True	NM_005686,NM_000537	chr1,chr1	+,-	SOX13,REN	-89317,3517
chr7:100238794-100239314	chr7	+	100238800	100239262	True	NM_003227,NM_023948	chr7,chr7	-,+	TFR2,MOSPD3	1,-28737
chr21:27107391-27107669	chr21	+	27107401	27107664	True	NM_001003701,NM_002040,NM_001003703,NM_001003697,NM_001003696,NM_001197297,NM_001685	chr21,chr21,chr21,chr21,chr21,chr21,chr21	-,+,-,-,-,+,-	ATP5J,GABPA,ATP5J,ATP5J,ATP5J,GABPA,ATP5J	351,-123,351,351,351,-194,351
chr1:36040674-36042272	chr1	+	36040872	36042207	True	NM_178548,NM_024874	chr1,chr1	+,-	TFAP2E,KIAA0319L	-1952,-17835
chr2:217559772-217560152	chr2	+	217559840	217560173	True	NM_000597,NM_000599	chr2,chr2	+,-	IGFBP2,IGFBP5	-61764,149
chr10:33624602-33624803	chr10	+	33624769	33624837	True	NM_001024629,NM_001024628,NM_024688,NM_003873	chr10,chr10,chr10,chr10	-,-,+,-	NRP1,NRP1,C10orf68,NRP1	-936,-936,-768169,-936
chr7:66340373-66341140	chr7	+	66340437	66340935	True	NR_003934,NM_017994	chr7,chr7	-,+	LOC729156,C7orf42	-30624,45267
chr2:152952207-152952717	chr2	+	152952452	152952729	True	NM_000726,NM_001005746,NM_052905,NM_001145798	chr2,chr2,chr2,chr2	-,-,+,-	CACNB4,CACNB4,FMNL2,CACNB4	2915,2557,239021,2915
chr8:87130380-87131005	chr8	+	87130713	87130953	True	NM_152565,NM_033126	chr8,chr8	+,-	ATP6V0D2,PSKH2	-19625,-48862
chr4:152144112-152145181	chr4	+	152144199	152145134	True	NM_001128923,NM_001009555,NM_183375	chr4,chr4,chr4	-,-,+	SH3D19,SH3D19,PRSS48	2584,2584,53190
chr18:77793782-77794475	chr18	+	77793867	77794471	True	NM_024805,NM_001171967,NM_006701	chr18,chr18,chr18	+,+,-	RBFA,RBFA,TXNL4A	-126,-126,-45335
chr9:33167882-33168091	chr9	+	33167989	33168139	True	NM_001497,NM_014471	chr9,chr9	-,+	B4GALT1,SPINK4	-633,72056
chr3:12802905-12803620	chr3	+	12803127	12803369	True	NM_001162499,NM_018306	chr3,chr3	+,-	CAND2,TMEM40	34801,-2319
chr7:150147241-150147621	chr7	+	150147284	150147620	True	NM_175571,NM_002889	chr7,chr7	+,-	GIMAP8,RARRES2	341,-108521
chr17:62205664-62206764	chr17	+	62205664	62206684	True	NR_004380,NM_001433	chr17,chr17	+,-	SNORD104,ERN1	16753,868
chr5:81280050-81281246	chr5	+	81280321	81281260	True	NM_031482,NM_012446	chr5,chr5	+,-	ATG10,SSBP2	-12538,-233249
chr5:55295589-55296615	chr5	+	55295708	55296626	True	NM_002184,NM_001190981,NM_175767,NM_139017	chr5,chr5,chr5,chr5	-,-,-,+	IL6ST,IL6ST,IL6ST,IL31RA	-4887,-4887,-4887,-148426
chr20:42880867-42882838	chr20	+	42881557	42882283	True	NM_024034,NM_016470	chr20,chr20	+,-	GDAP1L1,C20orf111	-5700,-42126
chr13:114586707-114587032	chr13	+	114586722	114586838	True	NM_000820,NR_024609	chr13,chr13	-,+	GAS6,FLJ44054	-19676,-163
chr22:32593286-32593836	chr22	+	32593800	32593878	True	NM_001098527,NR_033411,NM_006605,NM_001159546,NM_001159545	chr22,chr22,chr22,chr22,chr22	-,+,-,-,-	RFPL2,SLC5A1,RFPL2,RFPL2,RFPL2	5636,-138694,-4334,4709,6890
chr12:49689068-49689378	chr12	+	49689205	49689345	True	NM_001008223,NM_006262	chr12,chr12	-,+	C1QL4,PRPH	41676,-347
chr19:12915137-12915337	chr19	+	12915167	12915321	True	NM_005809,NM_181738,NM_006397	chr19,chr19,chr19	-,-,+	PRDX2,PRDX2,RNASEH2A	-2473,-2473,2106
chr1:48234788-48234996	chr1	+	48234861	48234971	True	NM_001194986,NM_004474	chr1,chr1	-,+	LOC388630,FOXD2	227641,-333227
chr12:14132281-14133241	chr12	+	14132300	14133190	True	NM_000834,NM_018179	chr12,chr12	-,+	GRIN2B,ATF7IP	-64,385420
chr22:37955677-37955911	chr22	+	37955725	37955854	True	NM_152243,NM_006498	chr22,chr22	+,-	CDC42EP1,LGALS2	616,20227
chr15:67836049-67837249	chr15	+	67836157	67837235	True	NM_002757,NM_145160,NM_024666	chr15,chr15,chr15	+,+,-	MAP2K5,MAP2K5,AAGAB	-1187,-1187,-289083
chr3:196366784-196367505	chr3	+	196366975	196367489	True	NM_032898,NM_198565,NM_182627	chr3,chr3,chr3	-,+,-	C3orf34,LRRC33,WDR53	71684,-370,-71562
chr16:11945845-11946098	chr16	+	11945851	11946003	True	NM_015659,NM_001192	chr16,chr16	-,+	RSL1D1,TNFRSF17	-409,112960
chr2:99549048-99549664	chr2	+	99549149	99549543	True	NM_207362,NM_144706	chr2,chr2	-,+	C2orf55,C2orf15	3191,208641
chr3:125652162-125652647	chr3	+	125652165	125652557	True	NM_001015050,NR_024251,NM_001195223	chr3,chr3,chr3	-,+,-	ALG1L,LOC100125556,ALG1L	3380,-16772,3380
chr17:37711054-37711352	chr17	+	37711163	37711227	True	NM_032192,NM_006160	chr17,chr17	+,-	PPP1R1B,NEUROD2	71951,53000
chr3:105573768-105574611	chr3	+	105573767	105574553	True	NM_170662,NM_001627	chr3,chr3	-,+	CBLB,ALCAM	13392,-488108
chr12:69079442-69080646	chr12	+	69079615	69080490	True	NM_020401,NR_033335	chr12,chr12	+,-	NUP107,SNORA70G	240,-58460
chr12:56101076-56101286	chr12	+	56101077	56101327	True	NM_001144996,NM_001144997,NR_037656,NR_037658,NR_037655,NR_037657,NM_001487,NM_002206	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,-,+,+,+,+,+,-	ITGA7,ITGA7,BLOC1S1,BLOC1S1-RDH5,BLOC1S1,BLOC1S1,BLOC1S1,ITGA7	409,4812,8748,8490,8490,8748,8490,409
chr10:6369389-6370011	chr10	+	6369448	6369863	True	NM_004566,NM_006257	chr10,chr10	+,-	PFKFB3,PRKCQ	-124660,252426
chr15:44487844-44488379	chr15	+	44487882	44488250	True	NM_032892,NM_138423	chr15,chr15	-,+	FRMD5,CASC4	-453,92658
chr7:30953857-30954539	chr7	+	30953882	30954576	True	NM_001185061,NM_001185060,NM_001185062,NM_001202481,NM_198098	chr7,chr7,chr7,chr7,chr7	+,+,+,-,+	AQP1,AQP1,AQP1,CRHR2,AQP1	6528,6338,6542,-214163,-2518
chr3:197684520-197685932	chr3	+	197684553	197685787	True	NR_026787,NR_026786,NM_001134435,NM_032263,NM_000996,NM_001136049,NM_033029	chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,-,-,+,+,+	LMLN,LMLN,IQCG,IQCG,RPL35A,LMLN,LMLN	1283,1283,-7757,1149,-7552,1283,1283
chr1:180881207-180881415	chr1	+	180881206	180881348	True	NM_020950,NM_005819	chr1,chr1	+,-	KIAA1614,STX6	964,110748
chr14:75517396-75517637	chr14	+	75517395	75517686	True	NM_001042430,NM_014381,NM_001040108	chr14,chr14,chr14	+,-,-	FAM164C,MLH3,MLH3	18612,599,599
chr17:3185339-3185591	chr17	+	3185343	3185435	True	NM_002551,NR_024128	chr17,chr17	-,+	OR3A2,OR3A4	-3075,28103
chr1:202829450-202830363	chr1	+	202829820	202830236	True	NM_002871,NR_002929	chr1,chr1	-,+	RABIF,LOC148709	28077,645
chr2:101180495-101180917	chr2	+	101180619	101180757	True	NM_004854,NM_024065	chr2,chr2	-,+	CHST10,PDCL3	-146489,-1252
chr7:20825632-20825837	chr7	+	20825637	20825861	True	NM_182700,NR_026673,NM_198956	chr7,chr7,chr7	-,+,-	SP8,RPL23P8,SP8	697,41055,697
chr1:161366420-161367142	chr1	+	161366668	161367044	True	NM_001013625,NM_003001	chr1,chr1	-,+	C1orf192,SDHC	-29004,-82565
chr1:36916309-36916939	chr1	+	36916355	36916779	True	NM_145047,NM_024676,NM_206837	chr1,chr1,chr1	-,+,-	OSCP1,SH3D21,OSCP1	-269,-143698,-269
chr7:15506463-15507479	chr7	+	15506462	15507528	True	NM_001195280,NM_001004320	chr7,chr7	+,-	LOC100506049,AGMO	1058976,94162
chr11:17300459-17302306	chr11	+	17300864	17302317	True	NM_000525,NM_005013	chr11,chr11	-,+	KCNJ11,NUCB2	107939,-2629
chr2:202674458-202675651	chr2	+	202674508	202675564	True	NM_001135745,NM_139158	chr2,chr2	-,+	ALS2,CDK15	-28613,-3361
chr7:2271133-2271749	chr7	+	2271280	2271691	True	NM_003550,NM_002452,NM_001013836,NM_001013837	chr7,chr7,chr7,chr7	-,+,-,-	MAD1L1,NUDT1,MAD1L1,MAD1L1	945,10165,945,945
chr2:131674129-131674400	chr2	+	131674179	131674395	True	NM_032995,NM_015320,NM_001009993	chr2,chr2,chr2	+,+,-	ARHGEF4,ARHGEF4,FAM168B	-6,-6,176659
chr1:155946649-155947659	chr1	+	155946789	155947627	True	NM_001162383,NM_004723,NM_181885,NM_001162384	chr1,chr1,chr1,chr1	-,-,+,-	ARHGEF2,ARHGEF2,RXFP4,ARHGEF2	759,389,-35360,759
chr9:125551381-125551735	chr9	+	125551521	125551777	True	NM_001001923,NM_005388	chr9,chr9	+,-	OR5C1,PDCL	-360,39208
chr8:144494562-144495049	chr8	+	144494579	144495076	True	NM_201589,NM_052924	chr8,chr8	-,+	MAFA,RHPN1	17576,-43605
chr3:38084137-38085976	chr3	+	38084476	38085447	True	NM_006225,NM_007335,NM_007337	chr3,chr3,chr3	-,+,+	PLCD1,DLEC1,DLEC1	-13322,-3831,-3831
chr20:296534-298189	chr20	+	297091	298169	True	NM_153269,NM_006943	chr20,chr20	-,+	C20orf96,SOX12	-25701,8069
chr3:129694932-129695743	chr3	+	129694949	129695741	True	NM_001128224,NM_007117	chr3,chr3	-,+	TMCC1,TRH	-82530,-1886
chr5:138086856-138088272	chr5	+	138086859	138088047	True	NM_015564,NM_001903	chr5,chr5	-,+	LRRTM2,CTNNA1	123060,1059
chr10:90758832-90760523	chr10	+	90759327	90760423	True	NR_028035,NR_028034,NR_028036,NM_000043,NR_028033,NM_152871,NR_028371,NM_001141945,NM_152872	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,+,-,-,+	FAS,FAS,FAS,FAS,FAS,FAS,FAS-AS1,ACTA2,FAS	-9099,-9099,-9099,-9099,-9099,-9099,-6595,-8180,-9099
chr1:209980865-209982328	chr1	+	209980986	209982232	True	NM_006147,NM_014388	chr1,chr1	-,+	IRF6,DIEXF	-1507,19079
chr16:88705395-88705646	chr16	+	88705395	88705683	True	NM_013278,NM_000101	chr16,chr16	+,-	IL17C,CYBA	-445,11824
chr20:10414960-10415253	chr20	+	10415149	10415297	True	NM_170784,NM_018848,NM_001009608	chr20,chr20,chr20	-,-,+	MKKS,MKKS,C20orf94	-283,-2579,653
chr15:52053486-52054064	chr15	+	52053517	52053647	True	NM_001143917,NM_014548,NM_001142885	chr15,chr15,chr15	-,+,+	LYSMD2,TMOD2,TMOD2	-9867,-9810,-9810
chr9:133969738-133970231	chr9	+	133969829	133970207	True	NM_001185095,NM_001185096,NM_031426,NM_001145106,NR_033701	chr9,chr9,chr9,chr9,chr9	+,+,+,-,+	AIF1L,AIF1L,AIF1L,FIBCD1,AIF1L	1655,1655,1655,-155374,1655
chr6:34757683-34758295	chr6	+	34757963	34758331	True	NM_017754,NM_024294	chr6,chr6	+,-	UHRF1BP1,C6orf106	1462,-93338
chr5:43104934-43105290	chr5	+	43104987	43105123	True	NM_003432,NR_034127	chr5,chr5	+,-	ZNF131,LOC100132356	16518,-37914
chr8:144898670-144899285	chr8	+	144898688	144899148	True	NR_033849,NM_182706,NR_030633,NM_015356	chr8,chr8,chr8,chr8	+,-,-,-	LOC100128338,SCRIB,MIR937,SCRIB	-82429,-1139,-3476,-1139
chr8:103135744-103136000	chr8	+	103135747	103135951	True	NM_001040630,NM_001040627,NM_001040626,NM_001040625,NM_001040624,NM_001040629,NM_001040628,NM_024410	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,-,-,-,+	NCALD,NCALD,NCALD,NCALD,NCALD,NCALD,NCALD,ODF1	1234,661,661,661,661,661,661,427896
chr7:112083839-112085280	chr7	+	112084007	112085074	True	NM_001197079,NM_014705,NM_001550	chr7,chr7,chr7	+,-,+	IFRD1,DOCK4,IFRD1	7038,-237545,5408
chr16:88519065-88519315	chr16	+	88519160	88519220	True	NM_000101,NM_153813	chr16,chr16	-,+	CYBA,ZFPM1	198287,793
chr8:67340972-67341185	chr8	+	67341054	67341232	True	NM_001080416,NM_015169,NM_144650	chr8,chr8,chr8	-,+,+	MYBL1,RRS1,ADHFE1	184298,30,3485
chr5:67532118-67533621	chr5	+	67532508	67533540	True	NM_005582,NM_181523	chr5,chr5	-,+	CD180,PIK3R1	-1039891,-10101
chr12:49412163-49412392	chr12	+	49412171	49412403	True	NM_002733,NM_212461,NM_005430	chr12,chr12,chr12	-,-,+	PRKAG1,PRKAG1,WNT1	239,239,-39986
chr19:15238900-15239672	chr19	+	15238913	15239478	True	NM_006844,NM_033025	chr19,chr19	-,+	ILVBL,SYDE1	-2336,-20750
chr16:12068854-12069095	chr16	+	12068939	12069006	True	NM_001130007,NM_032167	chr16,chr16	-,+	GSPT1,RUNDC2A	-58420,1595
chr10:95654153-95654358	chr10	+	95654154	95654394	True	NR_002319,NM_001134658,NM_153226	chr10,chr10,chr10	-,+,+	PIPSL,TMEM20,TMEM20	67328,-475,-475
chr19:45059463-45061069	chr19	+	45059677	45060506	True	NM_001205280,NR_027754	chr19,chr19	+,-	LOC147710,CEACAM22P	56433,-59
chr17:43971453-43971735	chr17_ctg5_hap1	-	895817	896067	False	NM_016835,NM_016834,NM_005910,NR_024559,NM_001123067,NM_001123066,NM_016841,NR_024560,NM_001203251,NM_001203252	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	-,-,-,+,-,-,-,-,-,-	MAPT,MAPT,MAPT,LOC100128977,MAPT,MAPT,MAPT,LOC100130148,MAPT,MAPT	13,13,13,-1174,13,13,13,-1393,13,13
chr17:43971453-43971735	chr17	+	43971452	43971760	True	NM_016835,NM_016834,NM_005910,NR_024559,NM_001123067,NM_001123066,NM_016841,NR_024560,NM_001203251,NM_001203252	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,-,+,+,+,+,+,+	MAPT,MAPT,MAPT,LOC100128977,MAPT,MAPT,MAPT,LOC100130148,MAPT,MAPT	-13,-13,-13,1169,-13,-13,-13,1388,-13,-13
chr22:43113523-43114564	chr22	+	43113637	43114032	True	NR_029422,NM_017436	chr22,chr22	+,-	RNU12,A4GALT	-102437,2895
chr20:33413564-33414549	chr20	+	33413650	33414074	True	NR_002165,NR_028046,NM_014071	chr20,chr20,chr20	-,+,-	HMGB3P1,ACSS2,NCOA6	8241,48691,-217
chr9:37908655-37909503	chr9	+	37908734	37909514	True	NM_024345,NM_033412,NR_024873,NR_024872	chr9,chr9,chr9,chr9	+,-,-,-	DCAF10,MCART1,MCART1,MCART1	-107995,-4384,-4384,-4384
chr3:134514108-134514334	chr3	+	134514110	134514382	True	NM_178554,NM_004441	chr3,chr3	-,+	KY,EPHB1	-144246,-62
chr18:67954145-67954642	chr18	+	67954246	67954554	True	NM_173630,NM_004232	chr18,chr18	-,+	RTTN,SOCS6	-81284,1582
chr17:27056813-27057219	chr17	+	27056865	27057123	True	NM_000984,NR_000014,NM_178170,NR_000010,NR_000013,NM_138463,NM_001160407,NR_000009	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,-,-,+	RPL23A,SNORD42A,NEK8,SNORD4A,SNORD42B,TLCD1,TLCD1,SNORD4B	-9916,-6469,-1084,-7316,-9348,-3635,-2916,-6217
chr16:8889940-8891321	chr16	+	8890048	8891282	True	NM_000303,NM_015421	chr16,chr16	+,-	PMM2,TMEM186	387,273
chr16:3766147-3766858	chr16	+	3766148	3766782	True	NM_005223,NM_016292	chr16,chr16	+,-	DNASE1,TRAP1	-63265,866
chr2:109604588-109605063	chr2	+	109604604	109605014	True	NM_022336,NM_001099289	chr2,chr2	-,+	EDAR,SH3RF3	864,140982
chr19:7969358-7969697	chr19	+	7969468	7969686	True	NM_206833,NM_145185	chr19,chr19	-,+	CTXN1,MAP2K7	21415,-754
chr2:165689589-165690006	chr2	+	165689881	165689959	True	NM_001040142,NM_014900	chr2,chr2	+,-	SCN2A,COBLL1	405952,8027
chr4:169242198-169243962	chr4	+	169242325	169243907	True	NM_017631,NM_001166108	chr4,chr4	-,+	DDX60,PALLD	-2367,174309
chr7:72937131-72937423	chr7	+	72937193	72937257	True	NM_003508,NM_032408	chr7,chr7	+,-	FZD9,BAZ1B	-89135,-578
chr9:111926969-111927720	chr9	+	111926995	111927682	True	NM_014334,NM_017832	chr9,chr9	-,+	C9orf4,C9orf6	1940,-230373
chr4:44449969-44450176	chr4	+	44450007	44450225	True	NM_198353,NM_021927	chr4,chr4	-,+	KCTD8,GUF1	649,230207
chr5:180628853-180629270	chr5	+	180628901	180629181	True	NM_203295,NM_203294,NM_203297,NM_203296,NM_033342,NM_203293,NM_033549	chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,-,-,+	TRIM7,TRIM7,TRIM7,TRIM7,TRIM7,TRIM7,TRIM41	2215,2215,-971,2215,3052,3052,21124
chr12:12940180-12940467	chr12	+	12940220	12940446	True	NM_030817,NM_006143	chr12,chr12	+,-	APOLD1,GPR19	-1730,-91099
chr8:77465250-77466449	chr8	+	77465335	77466451	True	NM_024721,NR_024360	chr8,chr8	+,-	ZFHX4,LOC100192378	127063,129110
chr13:73365351-73366288	chr13	+	73365559	73366152	True	NM_001128226,NM_006346,NM_014953	chr13,chr13,chr13	-,+,-	DIS3,PIBF1,DIS3	-9215,-9384,-9215
chr19:15308088-15308324	chr19	+	15308090	15308372	True	NM_033025,NM_000435	chr19,chr19	+,-	SYDE1,NOTCH3	-89927,3470
chr1:44118648-44119057	chr1	+	44118653	44119042	True	NR_033827,NM_014663	chr1,chr1	-,+	LOC100132774,KDM4A	54025,-2911
chr11:92087956-92088492	chr11	+	92088083	92088489	True	NM_152313,NM_001008781	chr11,chr11	-,+	SLC36A4,FAT3	842656,-2872
chr14:31925514-31926363	chr14	+	31925663	31926237	True	NM_080664,NM_025152	chr14,chr14	-,+	C14orf126,NUBPL	493,104353
chr10:75102822-75103389	chr10	+	75102991	75103177	True	NM_173348,NM_145170	chr10,chr10	+,-	FAM149B1,TTC18	-175165,15490
chr18:53236748-53237919	chr18	+	53237130	53237649	True	NM_001083962,NM_004163	chr18,chr18	-,+	TCF4,RAB27B	18275,-741348
chr1:10535435-10535775	chr1	+	10535514	10535734	True	NM_213566,NM_004565,NM_004401	chr1,chr1,chr1	-,+,-	DFFA,PEX14,DFFA	-2901,-562,-2901
chr14:57277424-57277948	chr14	+	57277423	57277922	True	NM_021728,NM_172337,NR_029385	chr14,chr14,chr14	-,-,+	OTX2,OTX2,OTX2OS1	-239,-5078,1978
chr17:39344223-39344866	chr17	+	39344409	39344866	True	NM_033062,NM_001190460,NM_033060	chr17,chr17,chr17	-,+,-	KRTAP4-2,KRTAP9-1,KRTAP4-1	-9949,1272,-3262
chr21:40138946-40140393	chr21	+	40139213	40139963	True	NM_005239,NR_027066,NR_027065	chr21,chr21,chr21	+,-,-	ETS2,NCRNA00114,NCRNA00114	37885,985,5488
chr22:24641372-24641700	chr22	+	24641499	24641737	True	NM_001099782,NM_001099781,NM_004121,NR_003714	chr22,chr22,chr22,chr22	-,-,-,+	GGT5,GGT5,GGT5,POM121L9P	-389,-389,-389,5851
chr16:67695016-67695450	chr16	+	67695179	67695497	True	NM_016948,NM_001082487,NM_001082486,NM_022914,NM_001012984,NM_032140,NM_001037281	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,-,+,-,+	PARD6A,ACD,ACD,ACD,C16orf86,C16orf48,PARD6A	-379,-461,-461,-461,5219,5181,-379
chr14:54863270-54863717	chr14	+	54863358	54863696	True	NM_005192,NM_005776,NM_001130851	chr14,chr14,chr14	+,-,+	CDKN3,CNIH,CDKN3	24,44502,24
chr5:173047531-173048684	chr5	+	173047739	173048666	True	NR_027109,NM_001159651,NM_138369	chr5,chr5,chr5	+,-,-	LOC285593,BOD1,BOD1	-41133,-4073,-4073
chr11:62415352-62415832	chr11	+	62415365	62415855	True	NM_001043229,NM_030628,NM_198335,NM_198334	chr11,chr11,chr11,chr11	+,-,-,-	METTL12,INTS5,GANAB,GANAB	16923,4969,-1261,-1261
chr1:20210267-20211299	chr1	+	20210366	20211288	True	NM_015207,NM_014589	chr1,chr1	+,-	OTUD3,PLA2G2E	-1529,38880
chr12:65560961-65561826	chr12	+	65560961	65561725	True	NM_001167614,NM_007191,NM_014319	chr12,chr12,chr12	+,-,+	LEMD3,WIF1,LEMD3	1625,-45615,1625
chr14:103023801-103024345	chr14	+	103023818	103024394	True	NM_152326,NR_036192	chr14,chr14	-,+	ANKRD9,MIR4309	-47690,-17888
chr3:179280520-179280728	chr3	+	179280537	179280711	True	NM_177989,NM_020409,NM_004301,NM_178042	chr3,chr3,chr3,chr3	+,-,+,+	ACTL6A,MRPL47,ACTL6A,ACTL6A	2,41773,2,2
chr6:153322099-153323544	chr6	+	153322513	153323494	True	NM_001114184,NM_194435,NM_019041	chr6,chr6,chr6	-,+,-	MTRF1L,VIP,MTRF1L	481,-250641,481
chr1:155659625-155659876	chr1	+	155659730	155659929	True	NM_001199849,NM_001198903,NM_004632,NM_018253,NM_001198902,NM_033657,NM_001199851,NM_001199850,NM_139121,NM_001198900,NM_001198901,NM_139118,NM_139119,NM_001198904,NM_001198905,NM_001198906	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,-,+,-,-,+,+,+,-,-,-,-,-,-,-,-	DAP3,YY1AP1,DAP3,YY1AP1,YY1AP1,DAP3,DAP3,DAP3,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1	-900,-1283,-897,-1162,-1215,-897,-900,-900,-966,-1162,-911,-907,-1165,-1283,-1162,-907
chr1:161599588-161600920	chr1	+	161599752	161600954	True	NR_024151,NM_000570	chr1,chr1	+,-	HSPA7,FCGR3B	-23954,254
chr1:161599588-161600920	chr1	+	161518982	161519032	False	NM_000569,NM_001127593,NM_001127592,NM_001127595,NM_001127596,NM_002155	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,+	FCGR3A,FCGR3A,FCGR3A,FCGR3A,FCGR3A,HSPA6	836,1431,836,1431,1431,-24997
chr4:134070744-134071661	chr4	+	134070752	134071557	True	NM_032961,NM_001114734,NM_020815	chr4,chr4,chr4	+,-,+	PCDH10,PABPC4L,PCDH10	-342,1051396,-342
chr5:442219-442583	chr5	+	442415	442529	True	NM_007277,NM_138464	chr5,chr5	+,-	EXOC3,C5orf55	804,779
chr18:66463327-66464302	chr18	+	66463414	66464354	True	NM_024781,NM_019022	chr18,chr18	+,-	CCDC102B,TMX3	962,-81061
chr12:123921477-123922049	chr12	+	123921476	123921878	True	NM_145058,NM_022717	chr12,chr12	-,+	RILPL2,SNRNP35	-212,20772
chr13:31306500-31306749	chr13	+	31306501	31306787	True	NM_001629,NM_002128	chr13,chr13	+,-	ALOX5AP,HMGB1	2857,-266420
chr9:84558901-84560087	chr9	+	84559012	84560062	True	NM_005077,NM_207416	chr9,chr9	-,+	TLE1,FAM75D3	-255416,-648
chr9:84558901-84560087	chr9	+	84543940	84544990	False	NM_001145197,NM_005077	chr9,chr9	+,-	FAM75D4,TLE1	-648,-240344
chr18:77749266-77749714	chr18	+	77749415	77749699	True	NM_001136180,NM_006701	chr18,chr18	+,-	HSBP1L1,TXNL4A	-24884,-883
chr6:75977948-75979702	chr6	+	75978017	75979392	True	NM_001143958,NM_001100409	chr6,chr6	-,+	TMEM30A,SENP6	15297,332229
chr1:27650737-27651885	chr1	+	27650918	27651724	True	NR_037576,NM_004672,NR_037577,NM_032125,NR_037580,NR_033926	chr1,chr1,chr1,chr1,chr1,chr1	+,-,+,+,+,+	TMEM222,MAP3K6,TMEM222,TMEM222,TMEM222,LOC644961	-2333,41663,-2333,-2333,-2333,-604
chr9:117272463-117273383	chr9	+	117272646	117273303	True	NM_001083885,NM_004888,NM_001173425,NM_015404	chr9,chr9,chr9,chr9	-,+,-,-	DFNB31,ATP6V1G1,DFNB31,DFNB31	-7151,76690,-4910,-4910
chr17:29152277-29152643	chr17	+	29152391	29152473	True	NM_015986,NM_024857	chr17,chr17	-,+	CRLF3,ATAD5	-613,6549
chr18:3411916-3412162	chr18	+	3411957	3412029	True	NM_019856,NM_174886	chr18,chr18	-,+	MYOM1,TGIF1	-191851,42
chr19:40932477-40932833	chr19	+	40932483	40932562	True	NM_020971,NM_013376	chr19,chr19	+,-	SPTBN4,SERTAD1	40563,-551
chrX:153771301-153772369	chrX	+	153771441	153771883	True	NM_003639,NM_001099856,NM_001099857,NM_001042351,NM_000402,NM_001145255	chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,-,-,+	IKBKG,IKBKG,IKBKG,G6PD,G6PD,IKBKG	4178,-1033,3678,3954,3400,3678
chr1:2324985-2326324	chr1	+	2325069	2326355	True	NM_024848,NM_007033	chr1,chr1	-,+	MORN1,RER1	-2076,-1906
chr3:48594836-48595060	chr3	+	48594840	48594971	True	NM_033629,NM_004567,NM_033199	chr3,chr3,chr3	+,-,-	TREX1,PFKFB4,UCN2	-87662,-613,6281
chr2:86113818-86114909	chr2	+	86113941	86114907	True	NM_003896,NM_032827	chr2,chr2	-,+	ST3GAL5,ATOH8	1300,-133083
chr4:141317801-141318345	chr4	+	141318090	141318383	True	NM_001153663,NR_033939	chr4,chr4	+,-	SCOC,LOC100129858	-23487,-23544
chr2:38374533-38375885	chr2	+	38374770	38375926	True	NR_027252,NM_000104	chr2,chr2	+,-	C2orf58,CYP1B1	-16578,-71447
chr17:64962415-64963952	chr17	+	64962619	64963961	True	NM_014877,NM_014405	chr17,chr17	-,+	HELZ,CACNG4	277408,-1690
chr1:9884664-9885515	chr1	+	9884681	9885475	True	NM_022787,NM_001009566,NM_014944	chr1,chr1,chr1	+,-,-	NMNAT1,CLSTN1,CLSTN1	118010,-131,-131
chr13:36920477-36920683	chr13	+	36920509	36920725	True	NM_015087,NM_001111046,NM_001142296,NM_001142295	chr13,chr13,chr13,chr13	-,+,-,-	SPG20,CCNA1,SPG20,SPG20	1,85241,1,259
chr2:113030708-113031660	chr2	+	113030726	113031499	True	NM_198581,NM_032494	chr2,chr2	+,-	ZC3H6,ZC3H8	1678,-18062
chr22:38429759-38430037	chr22	+	38429794	38429936	True	NM_013356,NM_001039583,NM_006941	chr22,chr22,chr22	-,+,-	SLC16A8,PICK1,SOX10	49284,23325,-49255
chr6:27833997-27834957	chr6	+	27834185	27834851	True	NM_003546,NM_003511,NM_003533,NM_005322	chr6,chr6,chr6,chr6	-,+,-,-	HIST1H4L,HIST1H2AL,HIST1H3I,HIST1H1B	6488,-1130,5298,558
chr7:148392349-148392894	chr7	+	148392443	148392913	True	NM_003592,NM_001203249	chr7,chr7	+,-	CUL1,EZH2	3019,187738
chr14:53170145-53171208	chr14	+	53170215	53171011	True	NM_002806,NM_014584	chr14,chr14	+,-	PSMC6,ERO1L	2884,-7796
chr9:19030117-19030345	chr9	+	19030123	19030372	True	NM_153707,NM_006570	chr9,chr9	-,+	FAM154A,RRAGA	2934,18999
chr12:99036667-99037684	chr12	+	99036666	99037574	True	NM_001160,NM_181869,NM_181868,NM_181861,NM_153687,NM_013229,NM_201613,NM_201612	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,+,+,-,+,-,-	APAF1,APAF1,APAF1,APAF1,IKBIP,APAF1,IKBIP,IKBIP	1503,1503,1503,1503,1065,1503,1065,1065
chr5:140010789-140011452	chr5	+	140010794	140011453	True	NM_001040021,NM_000591,NM_018502,NM_001174104,NM_001174105	chr5,chr5,chr5,chr5,chr5	-,-,+,-,-	CD14,CD14,TMCO6,CD14,CD14	1883,1632,7558,1883,1883
chrX:16668726-16669335	chrX	+	16669026	16669376	True	NM_001144002,NM_004057	chrX,chrX	-,+	CTPS2,S100G	61014,-796
chr3:122420431-122422078	chr3	+	122420458	122422065	True	NM_024610,NM_017554	chr3,chr3	-,+	HSPBAP1,PARP14	90636,-20837
chr22:38985971-38986880	chr22	+	38986337	38986739	True	NM_001002880,NM_007068	chr22,chr22	+,-	CBY1,DMC1	65918,-20148
chr1:33116605-33116889	chr1	+	33116676	33116852	True	NM_001135255,NM_001135256,NM_005610,NM_178547	chr1,chr1,chr1,chr1	+,+,+,-	RBBP4,RBBP4,RBBP4,ZBTB8OS	22,106,22,-491
chr1:40998204-40999792	chr1	+	40998235	40999325	True	NM_152373,NM_014747	chr1,chr1	+,-	ZNF684,RIMS3	-1053,132060
chr22:36878794-36880439	chr22	+	36878893	36880218	True	NM_012473,NM_145343	chr22,chr22	-,+	TXN2,APOL1	-1206,-229827
chr3:39401436-39403160	chr3	+	39402542	39403130	True	NM_001171174,NM_017875	chr3,chr3	-,+	CX3CR1,SLC25A38	-79316,21684
chr19:43385295-43386394	chr19	+	43385599	43386303	True	NM_001184826,NM_006905,NR_036584,NM_001184825	chr19,chr19,chr19,chr19	-,-,+,-	PSG1,PSG1,LOC100289650,PSG1	-1728,-1728,-59635,-1728
chr19:9093394-9094486	chr19	+	9093516	9094480	True	NM_001004456,NM_024690	chr19,chr19	+,-	OR1M1,MUC16	109440,-1498
chr16:69792991-69794322	chr16	+	69792991	69794206	True	NM_014062,NM_199423,NM_007014	chr16,chr16,chr16	-,+,+	NOB1,WWP2,WWP2	-4162,2067,2067
chr3:170586337-170586832	chr3	+	170586347	170586581	True	NM_001099645,NM_001185056	chr3,chr3	-,+	RPL22L1,CLDN11	1518,-447373
chr3:171758680-171759377	chr3	+	171758701	171759414	True	NM_001135095,NM_002662,NM_022763	chr3,chr3,chr3	+,-,+	FNDC3B,PLD1,FNDC3B	-408,-230428,-1334
chr2:169106124-169106517	chr2	+	169106310	169106465	True	NM_203463,NM_013233	chr2,chr2	+,-	LASS6,STK39	206369,-2205
chr19:39933976-39934465	chr19	+	39934032	39934206	True	NM_001111020,NM_003169,NM_001130825,NM_001130824,NM_001020	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	SUPT5H,SUPT5H,SUPT5H,SUPT5H,RPS16	1979,2081,1979,1979,-7414
chr2:239227369-239228474	chr2	+	239227926	239228516	True	NM_015650,NM_022817,NM_001139490	chr2,chr2,chr2	+,-,+	TRAF3IP1,PER2,TRAF3IP1	668,-30719,668
chr3:42543134-42543486	chr3	+	42543236	42543532	True	NM_004624,NM_001201584	chr3,chr3	+,-	VIPR1,SEC22C	571,80038
chr15:60881526-60883324	chr15	+	60881668	60883254	True	NM_134262,NM_012182	chr15,chr15	-,+	RORA,FOXB1	1503,-585298
chr2:111488965-111489622	chr2	+	111488978	111489652	True	NM_004336,NM_001142807	chr2,chr2	-,+	BUB1,ACOXL	-53294,497
chr11:46147523-46148179	chr11	+	46147842	46148220	True	NM_001101802,NM_052854,NM_016621	chr11,chr11,chr11	-,+,-	PHF21A,CREB3L1,PHF21A	-4857,151007,-4857
chr1:9712897-9713286	chr1	+	9712919	9713335	True	NR_027045,NM_005026	chr1,chr1	-,+	C1orf200,PIK3CD	1359,-1180
chr19:17324146-17325108	chr19	+	17324174	17324472	True	NM_005234,NM_018467	chr19,chr19	-,+	NR2F6,USE1	31729,1682
chr20:31594070-31595963	chr20	+	31594231	31596009	True	NM_025227,NM_080675	chr20,chr20	+,-	BPIL1,SUN5	-93,-1992
chr12:67024096-67024876	chr12	+	67024157	67024672	True	NM_001178074,NM_033647	chr12,chr12	-,+	GRIP1,HELB	48312,-327852
chr10:102729740-102731102	chr10	+	102729824	102730967	True	NM_001203244,NM_176792,NR_030339,NM_017893	chr10,chr10,chr10,chr10	+,-,+,+	SEMA4G,MRPL43,MIR608,SEMA4G	1318,16362,3774,1318
chr1:20464328-20464703	chr1	+	20464327	20464607	True	NM_022819,NM_012400	chr1,chr1	+,-	PLA2G2F,PLA2G2D	1215,-18319
chr12:56435154-56435449	chr12	+	56435308	56435436	True	NM_006928,NM_001029	chr12,chr12	-,+	PMEL,RPS26	-74812,249
chr16:55905798-55906175	chr16	+	55905860	55906142	True	NM_145024,NR_003276,NM_001143685	chr16,chr16,chr16	-,+,-	CES5A,CES1P1,CES5A	3190,-111409,3190
chr15:63339268-63340255	chr15	+	63339361	63340255	True	NM_001018006,NM_001018007,NM_001018004,NM_001018005,NM_001018008,NM_000366,NM_001018020,NM_015920	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,-	TPM1,TPM1,TPM1,TPM1,TPM1,TPM1,TPM1,RPS27L	-4574,-4574,-4574,-4574,380,-4574,-4574,109536
chr3:47424508-47425678	chr3	+	47424620	47425600	True	NM_012235,NM_015466	chr3,chr3	-,+	SCAP,PTPN23	91907,-2181
chr2:54015316-54016453	chr2	+	54015415	54016174	True	NM_001127398,NM_145863,NM_016115,NM_001127397,NM_015701,NM_001201965	chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,+,+,-	ERLEC1,ASB3,ASB3,ERLEC1,ERLEC1,ASB3	-1410,-1269,-1269,-1410,-1410,-1430
chr8:21645585-21645988	chr8	+	21645638	21645960	True	NM_001495,NM_001165038,NM_001165039,NM_015024	chr8,chr8,chr8,chr8	-,-,-,+	GFRA2,GFRA2,GFRA2,XPO7	436,436,436,131219
chr7:29233908-29234113	chr7	+	29234008	29234158	True	NM_004067,NM_031311	chr7,chr7	+,-	CHN2,CPVL	-6,-47855
chr2:223161344-223161632	chr2	+	223161349	223161599	True	NM_013942,NM_153038,NM_181458,NM_001127366,NM_181459,NM_181457,NM_000438,NM_181461,NM_181460	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	-,+,-,-,-,-,-,-,-	PAX3,CCDC140,PAX3,PAX3,PAX3,PAX3,PAX3,PAX3,PAX3	2166,1266,2166,2166,2166,2166,2166,2166,2166
chr2:69749858-69751607	chr2	+	69750091	69751228	True	NR_003705,NM_001153	chr2,chr2	-,+	SNORA36C,ANXA4	-2788,217898
chr16:15242427-15242733	chr16	+	15242552	15242780	True	NM_015027,NR_037466	chr16,chr16	+,-	PDXDC1,MIR3180-4	-173770,6129
chr16:15242427-15242733	chr16	+	2179863	2180091	False	NM_001009944,NM_000296,NR_037467,NM_014353	chr16,chr16,chr16,chr16	-,-,-,+	PKD1,PKD1,MIR3180-5,RAB26	5858,5858,6089,18559
chr1:202831697-202833312	chr1	+	202831744	202833162	True	NM_002871,NR_002929	chr1,chr1	-,+	RABIF,LOC148709	25151,-913
chr7:73443080-73443288	chr7	+	73443093	73443325	True	NM_001081754,NM_000501,NM_001081752,NM_001081753,NM_152559,NM_001081755	chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,-,+	ELN,ELN,ELN,ELN,WBSCR27,ELN	-717,-717,-717,-717,-186238,-717
chr1:32085021-32085233	chr1	+	32085048	32085232	True	NM_001525,NR_033688	chr1,chr1	+,-	HCRTR1,PEF1	-1798,25036
chr10:75259797-75260561	chr10	+	75259931	75260603	True	NM_001142353,NM_021132,NM_004922,NM_001142354	chr10,chr10,chr10,chr10	-,-,+,-	PPP3CB,PPP3CB,SEC24C,PPP3CB	-4149,-4149,243527,-4149
chr16:29086383-29087285	chr16	+	29086457	29087275	True	NM_024816,NR_003369	chr16,chr16	-,+	RABEP2,RRN3P2	-149925,-345
chr6:144374564-144375878	chr6	+	144374601	144375394	True	NM_001080951,NM_003764	chr6,chr6	-,+	PLAGL1,STX11	10399,96259
chr5:156536135-156537375	chr5	+	156536140	156537235	True	NM_005546,NM_032782	chr5,chr5	+,-	ITK,HAVCR2	70671,-2
chr12:6666412-6667560	chr12	+	6666467	6667434	True	NM_001039670,NM_001193457,NM_080730,NR_036467,NM_002046	chr12,chr12,chr12,chr12,chr12	-,-,-,-,+	IFFO1,IFFO1,IFFO1,IFFO1,GAPDH	-1218,-1218,-1218,-1218,-22862
chr4:154229328-154231073	chr4	+	154229501	154230734	True	NM_032117,NR_001562	chr4,chr4	+,-	MND1,ANXA2P1	35066,-76
chr2:64752030-64753732	chr2	+	64752213	64753528	True	NM_014755,NM_001002243,NM_017657,NM_203437	chr2,chr2,chr2,chr2	-,+,+,+	SERTAD2,AFTPH,AFTPH,AFTPH	127568,-825,-825,-825
chrY:2558036-2558436	chrY	+	2558051	2558465	True	NM_003140,NM_002414,NM_001122898	chrY,chrY,chrY	-,+,+	SRY,CD99,CD99	97377,762,762
chrY:2558036-2558436	chrX	+	2608051	2608465	False	NR_037842,NM_002414,NM_001122898	chrX,chrX,chrX	-,+,+	NCRNA00102,CD99,CD99	-74663,762,762
chr13:32885092-32885423	chr13	+	32885100	32885266	True	NM_000059,NM_001136571	chr13,chr13	+,-	BRCA2,ZAR1L	4350,879
chr17:7212487-7213058	chr17	+	7212524	7213104	True	NM_001970,NM_001143761,NM_001143762,NM_001143760,NM_004489	chr17,chr17,chr17,chr17,chr17	+,+,+,+,-	EIF5A,EIF5A,EIF5A,EIF5A,GPS2	-1719,-1287,-881,-2257,5604
chr17:29233646-29234239	chr17	+	29233672	29234096	True	NM_024683,NM_018404	chr17,chr17	-,+	C17orf42,ADAP2	-386,14657
chr6:14704163-14704786	chr6	+	14704197	14704819	True	NM_001031713,NM_004973	chr6,chr6	-,+	CCDC90A,JARID2	-889408,541707
chr8:143483575-143484091	chr8	+	143483584	143483868	True	NM_145003,NM_001702	chr8,chr8	-,+	TSNARE1,BAI1	725,61508
chr14:24605826-24607155	chr14	+	24605903	24606979	True	NM_016049,NM_203402,NM_002818,NM_006263,NM_176783,NM_017999	chr14,chr14,chr14,chr14,chr14,chr14	-,+,-,+,+,+	FAM158A,FITM1,PSME2,PSME1,PSME1,RNF31	3868,-5279,8926,-576,-576,9679
chr10:31983469-31984175	chr10	+	31983558	31984050	True	NM_001174094,NM_018287	chr10,chr10	+,-	ZEB1,ARHGAP12	-373551,233770
chr13:51792140-51792824	chr13	+	51792310	51792851	True	NR_003923,NM_145019	chr13,chr13	-,+	GUCY1B2,FAM124A	-152017,3655
chr9:102668978-102669232	chr9	+	102669077	102669225	True	NM_017919,NM_015051	chr9,chr9	+,-	STX17,ERP44	-213,192155
chr6:24121685-24122242	chr6	+	24121770	24122288	True	NM_016356,NM_080723	chr6,chr6	-,+	DCDC2,NRSN1	236042,4125
chr22:41459142-41459483	chr22	+	41459372	41459480	True	NM_138481,NR_031694	chr22,chr22	-,+	CHADL,MIR1281	177505,29036
chr1:156396879-156398105	chr1	+	156396976	156397880	True	NM_006365,NR_026549,NR_029691	chr1,chr1,chr1	-,+,-	C1orf61,RHBG,MIR9-1	1354,-58024,-6755
chrX:110015586-110016676	chrX	+	110015877	110016685	True	NM_001128166,NM_145234	chrX,chrX	+,-	PAK3,CHRDL1	170827,22442
chr19:46480607-46481937	chr19	+	46480922	46481779	True	NM_002516,NM_001080402	chr19,chr19	-,+	NOVA2,CCDC61	-4265,16559
chr14:105450808-105451183	chr14	+	105450838	105451150	True	NM_174891,NM_138420	chr14,chr14	+,-	C14orf79,AHNAK2	1465,-6144
chr11:66037770-66038481	chr11	+	66038180	66038454	True	NM_030981,NM_020470,NM_182553	chr11,chr11,chr11	+,-,+	RAB1B,YIF1A,CNIH2	-2175,18234,7241
chr2:180871823-180873096	chr2	+	180871837	180873039	True	NM_182678,NM_020943	chr2,chr2	+,-	UBE2E3,CWC22	972072,-57
chr1:115212919-115213930	chr1	+	115213023	115213612	True	NM_003176,NM_198459	chr1,chr1	+,-	SYCP1,DENND2C	183842,-291
chr19:5901582-5901839	chr19	+	5901583	5901677	True	NR_034166,NM_175614,NM_001017921,NM_001193375	chr19,chr19,chr19,chr19	-,-,+,-	NDUFA11,NDUFA11,VMAC,NDUFA11	2403,2403,3174,2403
chr13:99856215-99856851	chr13	+	99856225	99856777	True	NM_001144072,NR_026644,NR_036531,NM_177967,NR_036532	chr13,chr13,chr13,chr13,chr13	+,+,-,+,-	UBAC2,UBAC2,LOC100289373,UBAC2,LOC100289373	-3606,-3122,-3214,-3122,-3216
chr12:52840245-52840861	chr12	+	52840247	52840805	True	NM_002284,NM_005555	chr12,chr12	+,-	KRT86,KRT6B	-144649,5163
chrX:9005605-9005909	chrX	+	9005863	9005950	True	NM_001139466,NM_205849	chrX,chrX	+,-	TBL1X,FAM9B	425384,-4747
chr12:33048795-33049156	chr12	+	33048833	33049147	True	NM_001005242,NM_004572,NM_012063	chr12,chr12,chr12	-,-,+	PKP2,PKP2,DNM1L	683,683,-216747
chr3:52010613-52011909	chr3	+	52010763	52011629	True	NM_001198898,NM_001198896,NM_000666,NM_001174100,NM_001198895,NM_001146314,NR_027476,NM_015407,NM_001198897,NR_037192,NM_033008,NM_032750,NM_020418	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,-,+,-,-,+,+,+,-,-,-	ACY1,ACY1,ACY1,PCBP4,ACY1,ABHD14B,ABHD14B,ABHD14A,ACY1,ABHD14A-ACY1,PCBP4,ABHD14B,PCBP4	5670,5670,5670,-9281,5670,-2117,-2117,-1772,5670,-1772,-9281,-2117,-9313
chr1:204463967-204464337	chr1	+	204464068	204464376	True	NM_001204171,NM_002646	chr1,chr1	+,-	MDM4,PIK3C2B	21130,-4594
chr15:86228936-86229946	chr15	+	86228940	86229986	True	NR_031682,NM_144767	chr15,chr15	-,+	MIR1276,AKAP13	83874,-8723
chr14:35518391-35519303	chr14	+	35518393	35519127	True	NM_001079519,NM_017917,NM_173607	chr14,chr14,chr14	+,-,+	FAM177A1,PPP2R3C,FAM177A1	-4332,72450,-2835
chr1:53094578-53095245	chr1	+	53094700	53095222	True	NM_023077,NM_001042693	chr1,chr1	-,+	SELRC1,FAM159A	68866,3843
chr3:12833764-12834059	chr3	+	12833864	12833940	True	NM_012298,NM_001162499,NM_018306	chr3,chr3,chr3	+,+,-	CAND2,CAND2,TMEM40	4230,4230,-33056
chr2:113400552-113400839	chr2	+	113400559	113400701	True	NR_033871,NM_005415	chr2,chr2	-,+	FLJ42351,SLC20A1	1106,2732
chr7:55922414-55922747	chr7	+	55922414	55922702	True	NM_182633,NM_207366	chr7,chr7	+,-	ZNF713,SEPT14	57628,7838
chr1:46267776-46268156	chr1	+	46267792	46268186	True	NM_005897,NM_015112	chr1,chr1	-,+	IPP,MAST2	-51307,1098
chr17:78315032-78316696	chr17	+	78315117	78316644	True	NR_029376,NM_001164638	chr17,chr17	-,+	LOC100294362,FLJ35220	72374,72322
chr17:36953646-36955128	chr17	+	36953748	36955098	True	NM_003559,NM_002795	chr17,chr17	-,+	PIP4K2B,PSMB3	1110,-44797
chr3:186650149-186650636	chr3	+	186650154	186650528	True	NM_181573,NM_173217,NM_173216	chr3,chr3,chr3	-,+,+	RFC4,ST6GAL1,ST6GAL1	-125670,-1890,-1890
chr6:135502306-135502558	chr6	+	135502396	135502477	True	NM_001161658,NM_001161659,NM_001161660,NM_001130173,NM_001130172,NM_001161656,NM_001161657,NM_001145207,NM_005375	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	+,+,+,+,+,+,+,-,+	MYB,MYB,MYB,MYB,MYB,MYB,MYB,HBS1L,MYB	-2,-2,-2,-2,-2,-2,-2,-126360,-2
chr3:36434856-36436109	chr3	+	36434957	36436095	True	NM_003149,NM_033403	chr3,chr3	+,-	STAC,DCLK3	-12911,345315
chr2:88825180-88826477	chr2	+	88825463	88826147	True	NM_152670,NM_001135649	chr2,chr2	+,-	C2orf51,FOXI3	-1352,-73410
chr1:28257464-28258131	chr1	+	28257665	28257973	True	NM_001009568,NM_002946,NM_014474	chr1,chr1,chr1	+,-,+	SMPDL3B,RPA2,SMPDL3B	3530,-16429,3530
chr18:67954642-67955738	chr18	+	67954828	67955568	True	NM_173630,NM_004232	chr18,chr18	-,+	RTTN,SOCS6	-81866,568
chr14:101123388-101123606	chr14	+	101123431	101123651	True	NR_024096,NM_020836	chr14,chr14	+,-	C14orf70,BEGAIN	11,-87300
chr19:51482946-51483328	chr19	+	51483068	51483182	True	NM_005046,NM_005551,NM_139277	chr19,chr19,chr19	-,+,-	KLK7,KLK2,KLK7	4018,-106430,3939
chr17:18130031-18130269	chr17	+	18130168	18130318	True	NM_004140,NM_002018	chr17,chr17	+,-	LLGL1,FLII	-1283,31787
chr3:194072214-194072414	chr3	+	194072265	194072463	True	NM_001080513,NR_033929	chr3,chr3	-,+	CPN2,FLJ34208	-208,135405
chr2:27365488-27367428	chr2	+	27365631	27366637	True	NM_013388,NM_178553,NM_175769	chr2,chr2,chr2	-,-,+	PREB,C2orf53,TCF23	-8089,-3299,5307
chrY:1604864-1605908	chrY	+	1604907	1605907	True	NM_178129,NR_027383	chrY,chrY	-,+	P2RY8,AKAP17A	180,54578
chrY:1604864-1605908	chrX	+	1654907	1655907	False	NM_178129,NR_027383	chrX,chrX	-,+	P2RY8,AKAP17A	180,54578
chr13:80109792-80111110	chr13	+	80109806	80110823	True	NM_019080,NM_022118	chr13,chr13	+,-	NDFIP2,RBM26	-54612,-129883
chr10:102731102-102732898	chr10	+	102731236	102732818	True	NM_001203244,NM_176792,NR_030339,NM_017893	chr10,chr10,chr10,chr10	+,-,+,+	SEMA4G,MRPL43,MIR608,SEMA4G	-41,14504,1923,-41
chr12:49713485-49714348	chr12	+	49713703	49714307	True	NM_001100620,NM_001008223,NM_005480	chr12,chr12,chr12	+,-,+	TROAP,C1QL4,TROAP	2663,16714,2663
chrX:53311853-53312098	chrX	+	53311857	53312089	True	NR_024449,NM_015075,NM_144968	chrX,chrX,chrX	-,-,+	IQSEC2,IQSEC2,RIBC1	-1061,-1061,137749
chr19:52431193-52431518	chr19	+	52431454	52431564	True	NM_024840,NM_001031721,NM_023074	chr19,chr19,chr19	+,+,-	ZNF613,ZNF613,ZNF649	-817,-817,-23149
chr22:31743700-31744087	chr22	+	31743702	31744048	True	NM_014323,NM_004147,NM_032051,NM_032050,NM_032052	chr22,chr22,chr22,chr22,chr22	-,+,-,-,-	PATZ1,DRG1,PATZ1,PATZ1,PATZ1	-1453,51490,-1453,-1453,-1453
chr1:43751814-43752134	chr1	+	43751815	43752003	True	NM_005424,NM_182517,NM_001164829	chr1,chr1,chr1	+,-,-	TIE1,C1orf210,C1orf210	14660,-565,-527
chr1:120257209-120257661	chr1	+	120257403	120257676	True	NM_006623,NM_001166107	chr1,chr1	+,-	PHGDH,HMGCS2	-3035,53936
chr8:12293670-12293877	chr8	+	12293765	12293895	True	NR_026789,NM_001137610	chr8,chr8	+,-	FAM66A,FAM86B2	-74288,7
chr8:12293670-12293877	chr8	+	12051492	12051622	False	NM_001083537,NR_003494,NR_027425	chr8,chr8,chr8	-,-,+	FAM86B1,FAM86B1,FAM66D	52,52,-78252
chr3:185542981-185543217	chr3	+	185543089	185543223	True	NM_006548,NM_001007225,NR_027317	chr3,chr3,chr3	-,-,+	IGF2BP2,IGF2BP2,C3orf65	-262,-262,-112100
chr18:28678508-28680358	chr18	+	28678742	28680343	True	NM_001942,NM_004949,NM_024422	chr18,chr18,chr18	+,-,-	DSG1,DSC2,DSC2	217708,2095,2095
chr19:45446619-45446888	chr19	+	45446619	45446710	True	NM_001646,NM_145288,NR_037932,NM_000483	chr19,chr19,chr19,chr19	+,-,+,+	APOC4,ZNF296,APOC4-APOC2,APOC2	-1186,133035,-1186,2528
chr1:241713276-241714038	chr1	+	241713288	241713946	True	NM_003679,NM_000143	chr1,chr1	+,-	KMO,FH	-17659,-30203
chr9:110253105-110253436	chr9	+	110253304	110253448	True	NM_004235,NM_002874	chr9,chr9	-,+	KLF4,RAD23B	-1257,-207818
chr2:10584624-10585484	chr2	+	10584626	10585450	True	NM_002539,NM_134421,NR_028374	chr2,chr2,chr2	-,+,-	ODC1,HPCAL1,SNORA80B	3059,-140851,1581
chr17:40274590-40274797	chr17	+	40274670	40274844	True	NM_021078,NM_033194,NM_024119	chr17,chr17,chr17	-,+,-	KAT2A,HSPB9,DHX58	-1288,-3,-9919
chr5:170320719-170321797	chr5	+	170320866	170321831	True	NR_037474,NM_022897	chr5,chr5	-,+	MIR3912,RANBP17	491990,-32027
chr12:110210819-110211319	chr12	+	110210839	110211245	True	NR_026662,NM_032829,NR_026661	chr12,chr12,chr12	-,+,-	MGC14436,C12orf34,MGC14436	97,-58703,94
chr19:12884354-12885869	chr19	+	12884360	12885488	True	NM_002229,NM_013312,NM_001100176	chr19,chr19,chr19	+,-,-	JUNB,HOOK2,HOOK2	16821,996,996
chr12:72356953-72358221	chr12	+	72356986	72357856	True	NM_173353,NR_024072	chr12,chr12	+,-	TPH2,MRS2P2	-24420,-112223
chr12:106978297-106978503	chr12	+	106978309	106978509	True	NM_006825,NM_213594	chr12,chr12	-,+	CKAP4,RFX4	-336596,-1327
chr1:248737020-248737257	chr1	+	248737025	248737295	True	NM_001013355,NM_001001821	chr1,chr1	+,-	OR2G6,OR2T34	-52128,813
chr1:248737020-248737257	chr1	-	248637474	248637684	False	NM_001004694,NM_001005495	chr1,chr1	-,+	OR2T29,OR2T3	85140,-873
chr19:36234510-36234941	chr19	+	36234669	36234963	True	NM_024660,NM_144987,NM_172341,NM_001040425,NM_019104	chr19,chr19,chr19,chr19,chr19	-,-,+,-,+	IGFLR1,U2AF1L4,PSENEN,U2AF1L4,LIN37	-1318,1423,1530,1423,4548
chr10:21430959-21432300	chr10	+	21431001	21432109	True	NM_001177483,NM_001010896,NM_001195627	chr10,chr10,chr10	-,-,+	C10orf113,C10orf113,MLLT10	3429,3429,390991
chr7:116364510-116364769	chr7	+	116364596	116364803	True	NR_002330,NM_001127500	chr7,chr7	-,+	ST7OT1,MET	229635,-52195
chr7:41739740-41741205	chr7	+	41739744	41741069	True	NM_002192,NR_027119,NR_027118	chr7,chr7,chr7	-,+,+	INHBA,LOC285954,LOC285954	1687,-6249,-6281
chr21:47707775-47708311	chr21	+	47707976	47708304	True	NM_003906,NM_001006114,NM_058181	chr21,chr21,chr21	-,+,+	MCM3AP,YBEY,YBEY	-2740,-1773,-1773
chr17:40924240-40924639	chr17	+	40924245	40924669	True	NR_024462,NM_032353,NM_032387	chr17,chr17,chr17	-,+,+	LOC100190938,VPS25,WNK4	-10970,784,7979
chr9:4744227-4745253	chr9	+	4744404	4744934	True	NM_001199855,NM_001199854,NM_005772,NM_001199853,NM_001199852,NM_016282	chr9,chr9,chr9,chr9,chr9,chr9	-,-,+,-,-,-	AK3,AK3,RCL1,AK3,AK3,AK3	-2605,-3251,47899,-2361,-3095,-3095
chr1:7910724-7910952	chr1	+	7910775	7910995	True	NM_006786,NM_021995,NM_016831	chr1,chr1,chr1	-,-,+	UTS2,UTS2,PER3	2159,2606,-66071
chr17:63098186-63098463	chr17	+	63098192	63098512	True	NM_006572,NM_001165933	chr17,chr17	-,+	GNA13,RGS9	-45272,34943
chr12:66520026-66520430	chr12	+	66520155	66520383	True	NM_032338,NM_001142523	chr12,chr12	-,+	LLPH,IRAK3	4203,62594
chr11:124972785-124973227	chr11	+	124972785	124973179	True	NM_198277,NM_001080546	chr11,chr11	+,-	SLC37A2,TMEM218	-39823,76
chr14:24540023-24540233	chr14	+	24540064	24540266	True	NM_006032,NM_006177	chr14,chr14	+,-	CPNE6,NRL	489,13616
chr19:37960678-37962208	chr19	+	37960736	37961595	True	NM_144694,NM_152484	chr19,chr19	+,-	ZNF570,ZNF569	-805,-2397
chr6:27791779-27791998	chr6	+	27791795	27791993	True	NM_021968,NM_021066,NM_003521,NM_003541	chr6,chr6,chr6,chr6	+,-,+,-	HIST1H4J,HIST1H2AJ,HIST1H2BM,HIST1H4K	-17,-9277,-9024,7362
chr6:27791779-27791998	chr6	-	27799214	27799412	False	NM_021968,NM_003510,NM_003520,NM_003541	chr6,chr6,chr6,chr6	+,-,+,-	HIST1H4J,HIST1H2AK,HIST1H2BN,HIST1H4K	-7362,6755,7027,17
chr6:24665109-24666358	chr6	+	24665123	24666388	True	NM_018473,NM_016614,NM_001160094	chr6,chr6,chr6	+,-,+	ACOT13,TDP2,ACOT13	874,777,874
chr3:160474507-160474785	chr3	+	160474573	160474831	True	NM_139245,NM_002268	chr3,chr3	+,-	PPM1L,KPNA4	-628,-191197
chr1:32083013-32083239	chr1	+	32083064	32083164	True	NM_001525,NR_033688	chr1,chr1	+,-	HCRTR1,PEF1	136,27104
chr16:67879442-67879767	chr16	+	67879461	67879740	True	NM_025082,NM_020457,NM_005796	chr16,chr16,chr16	-,+,+	CENPT,THAP11,NUTF2	1672,-3299,1078
chr9:35080094-35080529	chr9	+	35080106	35080280	True	NM_007126,NM_203299,NM_004629	chr9,chr9,chr9	-,+,-	VCP,C9orf131,FANCG	-7367,-37934,-93
chr18:28952573-28953689	chr18	+	28952969	28953609	True	NM_177986,NM_024421,NM_001134453	chr18,chr18,chr18	+,-,+	DSG4,DSC1,DSG4	3130,-210150,3130
chr10:93561522-93561930	chr10	+	93561551	93561950	True	NM_025235,NM_152429	chr10,chr10	+,-	TNKS2,FGFBP3	-3457,107369
chr5:17216257-17216570	chr5	+	17216372	17216568	True	NR_027253,NM_006317	chr5,chr5	-,+	LOC285696,BASP1	1013,1181
chr3:195718550-195718965	chr3	+	195718724	195718960	True	NR_034088,NR_003264	chr3,chr3	+,-	LOC401109,SDHAP1	150546,-1574
chr3:195718550-195718965	chr3	+	197356479	197356543	False	NR_003266,NM_001011537	chr3,chr3	-,+	LOC220729,FYTTD1	-1727,119880
chr15:90459060-90459620	chr15	+	90459094	90459621	True	NM_182616,NM_198526,NM_001199058	chr15,chr15,chr15	-,+,-	C15orf38,ZNF710,C15orf38-AP3S2	-2872,85130,-2872
chr9:114423213-114423489	chr9	+	114423265	114423489	True	NM_001017998,NR_034087,NM_001198664	chr9,chr9,chr9	+,-,+	GNG10,C9orf29,GNG10	361,-47432,361
chr11:65648622-65649525	chr11	+	65648686	65649106	True	NR_037718,NM_198897,NM_004214,NM_016938,NM_001335,NM_006848	chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,+,+	EFEMP2,FIBP,FIBP,EFEMP2,CTSW,CCDC85B	-8281,6954,6954,-8281,-1453,8768
chr2:99069091-99071007	chr2	+	99069559	99070838	True	NM_001008215,NM_001134225,NM_001134224,NM_001566,NM_004027	chr2,chr2,chr2,chr2,chr2	-,+,+,+,+	C2orf64,INPP4A,INPP4A,INPP4A,INPP4A	154174,-8295,-8295,-8295,-8295
chr12:2115186-2115456	chr12	+	2115213	2115304	True	NM_000719,NM_152640	chr12,chr12	+,-	CACNA1C,DCP1B	47111,-1536
chr4:187186561-187188020	chr4	+	187187061	187187915	True	NM_000128,NR_033900	chr4,chr4	+,-	F11,LOC285441	-1,234357
chr3:121813448-121814325	chr3	+	121813464	121814374	True	NM_006889,NM_001199799	chr3,chr3	+,-	CD86,ILDR1	-16772,-72337
chr2:207099811-207101601	chr2	+	207099983	207101505	True	NM_020923,NM_005279	chr2,chr2	+,-	ZDBF2,GPR1	38017,-17212
chr12:15102321-15102759	chr12	+	15102321	15102759	True	NM_006205,NM_152321	chr12,chr12	+,-	PDE6H,ERP27	23196,-10858
chr6:33246155-33247082	chr6_qbl_hap6	+	4478647	4479257	False	NM_003782,NM_022551,NM_022553	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	+,+,-	B3GALT4,RPS18,VPS52	-1542,-6610,-6749
chr6:33246155-33247082	chr6_mcf_hap5	+	4720182	4720792	False	NM_003782,NM_022551,NM_022553	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	+,+,-	B3GALT4,RPS18,VPS52	-1542,-6611,-6750
chr6:33246155-33247082	chr6_cox_hap2	+	4690218	4690828	False	NM_003782,NM_022551,NM_022553	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,+,-	B3GALT4,RPS18,VPS52	-1542,-6607,-6746
chr6:33246155-33247082	chr6	+	33246408	33247018	True	NM_003782,NM_022551,NM_022553	chr6,chr6,chr6	+,+,-	B3GALT4,RPS18,VPS52	-1542,-6607,-6746
chr6:33246155-33247082	chr6_dbb_hap3	+	4527730	4528340	False	NM_003782,NM_022551,NM_022553	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	+,+,-	B3GALT4,RPS18,VPS52	-1542,-6607,-6746
chr1:154301962-154303740	chr1	+	154302042	154303770	True	NM_020452,NM_080429,NM_138740,NM_001005855	chr1,chr1,chr1,chr1	+,+,-,+	ATP8B2,AQP10,C1orf43,ATP8B2	-1819,-8503,-108769,-4059
chr19:33718261-33720039	chr19	+	33718567	33719963	True	NM_002333,NM_019849	chr19,chr19	+,-	LRP3,SLC7A10	-33020,-1811
chr5:138628226-138628523	chr5	+	138628229	138628357	True	NM_005847,NM_018834,NM_001194956,NM_001194955	chr5,chr5,chr5,chr5	-,+,+,+	SLC23A1,MATR3,MATR3,MATR3	90732,975,1081,1081
chr13:111837208-111837408	chr13	+	111837212	111837450	True	NM_001113513,NM_017664	chr13,chr13	+,-	ARHGEF7,ANKRD10	1722,-269796
chr1:217263389-217263771	chr1	+	217263388	217263742	True	NM_138796,NM_206595,NM_206594	chr1,chr1,chr1	+,-,-	SPATA17,ESRRG,ESRRG	540952,-412,-412
chr22:30727222-30727753	chr22	+	30727272	30727594	True	NM_001204240,NM_031937,NM_001017437	chr22,chr22,chr22	-,-,+	TBC1D10A,TBC1D10A,CCDC157	-4317,-4317,25032
chr4:68427936-68428203	chr4	+	68428074	68428213	True	NM_012108,NM_001812	chr4,chr4	+,-	STAP1,CENPC1	-3689,-16818
chr10:27541838-27542210	chr10	+	27541893	27541967	True	NR_003525,NM_032844	chr10,chr10	-,+	LOC387646,MASTL	-658,-98191
chr4:102257659-102258810	chr4	+	102257785	102258838	True	NM_001130692,NM_000944,NM_001130691,NR_033874	chr4,chr4,chr4,chr4	-,-,-,+	PPP3CA,PPP3CA,PPP3CA,FLJ20021	9841,9841,9841,10095
chr3:195941207-195941669	chr3	+	195941216	195941473	True	NM_001039617,NM_152672	chr3,chr3	-,+	ZDHHC19,OSTalpha	-2916,1909
chr18:7230033-7230459	chr18	+	7230215	7230479	True	NM_005559,NM_001105581	chr18,chr18	-,+	LAMA1,LRRC30	-112402,657
chr6:43019493-43019977	chr6	+	43019527	43020019	True	NM_015950,NM_001168370,NM_014780,NM_201521,NM_201523,NM_201522,NM_138343	chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,+,+,+,+	MRPL2,CUL7,CUL7,KLC4,KLC4,KLC4,KLC4	7273,1714,1714,7352,7609,8162,7352
chr12:54982680-54982971	chr12	+	54982716	54982932	True	NM_006741,NM_001165975	chr12,chr12	-,+	PPP1R1A,PDE1B	-273,-27668
chr5:141705924-141706431	chr5	+	141706048	141706472	True	NM_030571,NM_001127496,NM_030964	chr5,chr5,chr5	+,-,-	NDFIP1,SPRY4,SPRY4	-217775,-1428,-1428
chr19:55741444-55741841	chr19	+	55741546	55741890	True	NM_173804,NM_032430	chr19,chr19	-,+	TMEM86B,BRSK1	-914,53643
chr1:110026144-110026724	chr1	+	110026234	110026662	True	NM_001134402,NM_020703,NM_153340	chr1,chr1,chr1	+,-,+	CYB561D1,AMIGO1,ATXN7L2	9995,25724,76
chr1:41488504-41489812	chr1	+	41488516	41489676	True	NR_037868,NM_144990,NM_001168247	chr1,chr1,chr1	+,-,-	LOC100507178,SLFNL1,SLFNL1	-8305,-1089,-1119
chr19:52135656-52136271	chr19	+	52135660	52136298	True	NM_003830,NR_029843	chr19,chr19	-,+	SIGLEC5,MIR99B	-1933,59566
chr4:2939093-2939356	chr4	+	2939161	2939375	True	NR_015453,NM_001120,NM_001146069	chr4,chr4,chr4	+,-,-	C4orf10,MFSD10,MFSD10	-1934,-3197,-2575
chr19:7983974-7984197	chr19	+	7984129	7984203	True	NM_206833,NM_001195259,NM_003083,NR_030717	chr19,chr19,chr19,chr19	-,+,+,+	CTXN1,LOC645781,SNAPC2,SNAPC2	6898,-3148,990,1663
chr1:161597917-161598987	chr1	+	161598175	161598907	True	NR_024151,NM_000570	chr1,chr1	+,-	HSPA7,FCGR3B	-22389,2301
chr1:161597917-161598987	chr1	+	161516817	161517549	False	NM_000569,NM_001127593,NM_001127592,NM_001127595,NM_001127596,NM_002155	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,+	FCGR3A,FCGR3A,FCGR3A,FCGR3A,FCGR3A,HSPA6	2319,2914,2319,2914,2914,-22844
chr11:1873202-1873768	chr11	+	1873352	1873760	True	NM_002339,NR_036185	chr11,chr11	+,-	LSP1,MIR4298	439,7056
chr9:140142578-140143601	chr9	+	140142598	140143462	True	NM_001004353,NM_006088,NM_001001710,NM_015456	chr9,chr9,chr9,chr9	+,+,-,+	C9orf173,TUBB2C,FAM166A,COBRA1	2267,-6938,-376,6296
chr20:49350924-49351357	chr20	+	49351335	49351410	True	NM_032521,NM_080829	chr20,chr20	+,-	PARD6B,FAM65C	-3305,-97909
chr1:177932563-177933352	chr1	+	177932828	177933344	True	NM_170692,NM_033127	chr1,chr1	+,-	RASAL2,SEC16B	129519,5756
chr11:129128274-129130029	chr11	+	129128364	129130072	True	NM_001142685,NM_003658	chr11,chr11	-,+	ARHGAP32,BARX2	-66271,115808
chr9:102879234-102879581	chr9	+	102879445	102879619	True	NM_015051,NM_183245	chr9,chr9	-,+	ERP44,INVS	-18115,-17985
chr4:154388639-154389323	chr4	+	154388755	154389349	True	NR_001562,NM_015196,NM_001131007	chr4,chr4,chr4	-,+,+	ANXA2P1,KIAA0922,KIAA0922	-158792,-1308,-1308
chr9:100615907-100616120	chr9	+	100615929	100615999	True	NM_004473,NM_016481	chr9,chr9	+,-	FOXE1,C9orf156	-443,68903
chr20:42984424-42984662	chr20	+	42984563	42984623	True	NM_001080472,NM_001030003,NM_001030004,NM_175914	chr20,chr20,chr20,chr20	-,+,+,+	FITM2,HNF4A,HNF4A,HNF4A	-44674,-173,-173,-173
chr20:6104259-6105025	chr20	+	6104492	6104882	True	NM_001127458,NM_017671	chr20,chr20	+,-	CRLS1,FERMT1	-116645,-301
chr4:144133342-144135080	chr4	+	144133453	144135096	True	NM_032557,NM_003866	chr4,chr4	+,-	USP38,INPP4B	-27434,-365849
chr17:30187770-30189236	chr17	+	30187961	30189000	True	NM_018405,NM_015355	chr17,chr17	-,+	C17orf79,SUZ12	-1635,75043
chr11:89429433-89429705	chr11	+	89429598	89429676	True	NM_001146162,NM_001143837	chr11,chr11	+,-	TRIM77,NOX4	13790,-106819
chrY:26332585-26333093	chrY	+	26332736	26333124	True	NR_001526,NR_001554	chrY,chrY	+,-	TTTY17A,CSPG4P1Y	298354,304
chrY:26332585-26333093	chrY	-	27629308	27629696	False	NR_002179,NR_001554	chrY,chrY	-,+	TTTY17C,CSPG4P1Y	-298388,-304
chr2:129274732-129275590	chr2	+	129275044	129275332	True	NM_004807,NR_027671	chr2,chr2	-,+	HS6ST1,UGGT1	-198873,-426327
chr19:9897875-9898380	chr19	+	9898023	9898411	True	NM_001048241,NM_001077624	chr19,chr19	+,-	UBL5,ZNF846	40156,-18613
chr7:63704550-63705697	chr7	+	63704873	63705263	True	NM_178558,NM_153363	chr7,chr7	-,+	ZNF680,ZNF679	318302,-16074
chr11:5005316-5006159	chr11	+	5005399	5006182	True	NM_021801,NM_001004748	chr11,chr11	+,-	MMP26,OR51A2	3241,-28456
chr1:36931186-36931990	chr1	+	36931365	36931796	True	NM_024676,NM_031280	chr1,chr1	+,-	SH3D21,MRPS15	-158708,-1325
chr1:54663555-54663771	chr1	+	54663745	54663819	True	NM_001031672,NM_016491	chr1,chr1	-,+	CYB5RL,MRPL37	1977,2020
chr1:117211759-117213596	chr1	+	117212086	117213413	True	NR_031564,NM_001007237,NM_001542	chr1,chr1,chr1	+,-,-	MIR320B1,IGSF3,IGSF3	957,-1772,-1772
chr11:46368152-46368780	chr11	+	46368154	46368720	True	NM_001199266,NM_001199267,NM_000741,NM_001199268,NM_201533,NM_003646	chr11,chr11,chr11,chr11,chr11,chr11	+,+,-,+,+,+	DGKZ,DGKZ,CHRM4,DGKZ,DGKZ,DGKZ	235,235,39437,235,-1389,235
chr9:80912594-80913009	chr9	+	80912623	80913028	True	NM_002072,NM_021154,NM_058179	chr9,chr9,chr9	-,+,+	GNAQ,PSAT1,PSAT1	-266404,-615,-615
chr15:66650261-66651413	chr15	+	66650548	66650752	True	NM_017858,NM_002755	chr15,chr15	-,+	TIPIN,MAP2K1	-1494,28458
chr9:139742273-139742855	chr9	+	139742282	139742766	True	NM_003792,NM_206920,NM_014172,NM_001080482,NM_001135861	chr9,chr9,chr9,chr9,chr9	-,+,+,+,+	EDF1,MAMDC4,PHPT1,C9orf172,PHPT1	18022,4052,489,-3466,489
chr2:54482292-54482540	chr2	+	54482315	54482571	True	NM_001003937,NM_001100396	chr2,chr2	-,+	TSPYL6,C2orf73	888,75499
chr11:85953458-85953758	chr11	+	85953598	85953757	True	NM_152991,NM_003797,NM_007166	chr11,chr11,chr11	+,+,-	EED,EED,PICALM	2057,2057,-173490
chr4:186129352-186129603	chr4	+	186129525	186129606	True	NM_020827,NM_031953	chr4,chr4	-,+	KIAA1430,SNX25	-4343,1677
chr5:5052676-5052900	chr5	+	5052675	5052905	True	NR_026994,NR_028351	chr5,chr5	+,-	LOC340094,FLJ33360	-18254,1284550
chr1:44869994-44870217	chr1	+	44869994	44870248	True	NM_018150,NM_024066	chr1,chr1	+,-	RNF220,ERI3	711,-49055
chr16:71258757-71259435	chr16	+	71258805	71259346	True	NM_032821,NM_001198542,NM_001198543,NM_001740,NM_017558	chr16,chr16,chr16,chr16,chr16	-,-,-,+,-	HYDIN,HYDIN,HYDIN,CALB2,HYDIN	5280,5336,5336,133269,5303
chr15:75071040-75072610	chr15	+	75071599	75072476	True	NM_000499,NM_001127190,NM_004383	chr15,chr15,chr15	-,+,+	CYP1A1,CSK,CSK	-53722,1948,1948
chrX:105066640-105066892	chrX	+	105066758	105066914	True	NM_198465,NM_000354	chrX,chrX	+,-	NRK,SERPINA7	-273,215854
chr14:105647049-105647275	chr14	+	105647069	105647207	True	NM_177533,NM_033271	chr14,chr14	-,+	NUDT14,BTBD6	503,67671
chr10:135378515-135378962	chr10	+	135378551	135378871	True	NM_130784,NR_033789,NM_001143763,NM_001143764,NM_000773	chr10,chr10,chr10,chr10,chr10	-,-,-,-,+	SYCE1,SPRNP1,SYCE1,SYCE1,CYP2E1	4055,4641,317,317,-37735
chr17:66455162-66456052	chr17	+	66455243	66455818	True	NM_017983,NM_212471	chr17,chr17	-,+	WIPI1,PRKAR1A	-1590,52291
chr15:38801782-38803346	chr15	+	38802165	38803384	True	NM_173611,NM_001128602	chr15,chr15	+,-	FAM98B,RASGRP1	-55888,53680
chr5:140614395-140615191	chr5	+	140614539	140615166	True	NM_018935,NR_001282,NR_001281,NM_031947	chr5,chr5,chr5,chr5	+,+,+,-	PCDHB15,PCDHB19P,PCDHB18,SLC25A2	9980,4522,-659,68497
chr17:13499139-13499571	chr17	+	13499214	13499596	True	NR_003261,NM_006042	chr17,chr17	+,-	CDRT15P,HS3ST3A1	428218,5700
chr2:203884301-203885248	chr2	+	203884313	203885129	True	NM_018256,NM_001114132	chr2,chr2	-,+	WDR12,NBEAL1	-107364,-4762
chr1:226410214-226410869	chr1	+	226410329	226410681	True	NM_022735,NM_031944	chr1,chr1	-,+	ACBD3,MIXL1	-35906,701
chr19:21202068-21203172	chr19	+	21203001	21203224	True	NM_001172671,NM_025189,NM_021269	chr19,chr19,chr19	+,+,-	ZNF430,ZNF430,ZNF708	201,201,309045
chr11:121321709-121322537	chr11	+	121321714	121322498	True	NR_029671,NM_003105	chr11,chr11	-,+	MIR125B1,SORL1	648104,413
chr7:23508282-23508583	chr7	+	23508357	23508617	True	NR_026676,NM_006547	chr7,chr7	+,-	RPS2P32,IGF2BP3	21389,1428
chr8:125463110-125463324	chr8	+	125463148	125463338	True	NM_017956,NM_194291	chr8,chr8	+,-	TRMT12,TMEM65	-151,-78208
chr4:140216177-140216577	chr4	+	140216184	140216569	True	NM_001184987,NM_001184986,NM_001184990,NM_001184991,NM_001184989,NM_001184988,NM_057175,NM_002494	chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4	-,-,-,-,-,-,+,-	NDUFC1,NDUFC1,NDUFC1,NDUFC1,NDUFC1,NDUFC1,NAA15,NDUFC1	7186,5845,7186,5845,7186,7186,6106,5869
chr3:69994457-69994980	chr3	+	69994471	69994883	True	NM_198178,NM_001184968,NM_000248,NM_015123,NM_198158	chr3,chr3,chr3,chr3,chr3	+,+,+,-,+	MITF,MITF,MITF,FRMD4B,MITF	-8771,-8771,-8771,-559041,-8771
chr17:4617113-4617895	chr17	+	4617309	4617761	True	NM_004313,NM_199004,NM_014389	chr17,chr17,chr17	+,+,-	ARRB2,ARRB2,PELP1	-3571,-3571,-9677
chr1:205175989-205176500	chr1	+	205175999	205176549	True	NM_014858,NM_015375,NM_199462	chr1,chr1,chr1	+,-,-	TMCC2,DSTYK,DSTYK	20488,4230,4230
chr1:228023015-228024104	chr1	+	228023117	228023499	True	NM_183062,NM_023007	chr1,chr1	+,-	PRSS38,JMJD4	-19752,-100005
chr17:20945630-20945914	chr17	+	20945745	20945943	True	NM_015276,NM_015510	chr17,chr17	-,+	USP22,DHRS7B	459,84314
chr16:32894930-32895589	chr16	+	32894976	32895508	True	NR_003083,NM_016212	chr16,chr16	-,+	SLC6A10P,TP53TG3	1005,309471
chr16:32894930-32895589	chr16	-	33779815	33780347	False	NR_033866,NM_001205265	chr16,chr16	-,+	LOC390705,TP53TG3B	-481113,-517746
chr6:28303653-28303868	chr6	+	28303653	28303845	True	NM_024493,NR_024164,NR_024165,NM_030899,NM_001135216	chr6,chr6,chr6,chr6,chr6	+,-,-,-,-	ZKSCAN3,ZNF323,ZNF323,ZNF323,ZNF323	13845,116,357,357,116
chr11:5289318-5291296	chr11	+	5289317	5291181	True	NM_005330,NM_001004750	chr11,chr11	-,+	HBE1,OR51B6	242,81556
chr17:40715198-40717046	chr17	+	40715205	40717076	True	NM_170607,NM_198204,NM_198205,NM_025233,NM_001042531,NM_001042530,NM_001042532,NM_013290,NM_001042529	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,+,+,-,+	MLX,MLX,MLX,COASY,COASY,COASY,COASY,PSMC3IP,COASY	2001,2001,2001,-1164,-1164,-1164,-1164,12721,-1164
chr22:32146141-32146342	chr22	+	32146198	32146390	True	NM_001007188,NM_014662,NM_001136029,NM_173566	chr22,chr22,chr22,chr22	+,+,+,-	DEPDC5,DEPDC5,DEPDC5,PRR14L	3678,3678,4462,-78
chr4:15004664-15004867	chr4	+	15004786	15004852	True	NM_001177384,NM_001177381,NM_001177383,NM_001177382,NM_182646,NM_001193534,NM_182485	chr4,chr4,chr4,chr4,chr4,chr4,chr4	+,+,+,+,+,-,+	CPEB2,CPEB2,CPEB2,CPEB2,CPEB2,FBXL5,CPEB2	-539,-539,-539,-539,-539,652233,-539
chr16:1822577-1822961	chr16	+	1822793	1823009	True	NM_080861,NM_002513,NM_001010865,NM_023936,NM_012225	chr16,chr16,chr16,chr16,chr16	-,-,+,-,+	SPSB3,NME3,EME2,MRPS34,NUBP2	9622,-1083,219,181,9923
chr11:75918559-75918948	chr11	+	75918621	75918963	True	NM_004626,NM_020193	chr11,chr11	-,+	WNT11,C11orf30	-1047,237105
chrX:8698518-8698927	chrX	+	8698553	8698898	True	NM_001001888,NM_000216	chrX,chrX	+,-	VCX3B,KAL1	-265733,1379
chr4:91048565-91048945	chr4	+	91048675	91048989	True	NM_001145065,NM_001146055	chr4,chr4	+,-	FAM190A,SNCA	-42,-289228
chr1:197170675-197171361	chr1	+	197170769	197171341	True	NM_001193640,NM_194314	chr1,chr1	+,-	CRB1,ZBTB41	65992,-1097
chr9:101557998-101558328	chr9	+	101558085	101558331	True	NM_173551,NM_024642	chr9,chr9	-,+	ANKS6,GALNT12	513,11649
chr6:35478917-35479464	chr6	+	35478932	35479297	True	NM_003322,NM_007104	chr6,chr6	-,+	TULP1,RPL10A	1401,-42805
chr4:54427850-54429227	chr4	+	54427868	54428842	True	NM_032622,NM_030917	chr4,chr4	-,+	LNX1,FIP1L1	-3432,-184099
chr11:55105517-55107444	chr11	+	55105903	55107262	True	NM_001004700,NM_001005274	chr11,chr11	-,+	OR4C11,OR4A16	264646,3414
chr1:154541209-154543049	chr1	+	154541389	154543001	True	NM_000748,NM_017582	chr1,chr1	+,-	CHRNB2,UBE2Q1	-1183,-10269
chr12:53068297-53068880	chr12	+	53068409	53068925	True	NM_199187,NM_006121	chr12,chr12	+,-	KRT18,KRT1	273729,5316
chr5:115175335-115176288	chr5	+	115175376	115175900	True	NM_001284,NR_033362,NR_033363,NM_004707	chr5,chr5,chr5,chr5	+,-,-,-	AP3S1,ATG12,ATG12,ATG12	1718,1700,1700,1700
chr22:22900077-22901222	chr22	+	22900110	22901199	True	NR_027426,NM_006115,NM_206953,NM_206955,NM_206954,NM_206956	chr22,chr22,chr22,chr22,chr22,chr22	+,-,-,-,-,-	LOC648691,PRAME,PRAME,PRAME,PRAME,PRAME	556,547,547,401,547,401
chrY:27243311-27245201	chrY	+	27243501	27244889	True	NR_002178,NR_002177,NM_001005786,NR_001525	chrY,chrY,chrY,chrY	-,-,+,-	TTTY4B,TTTY4C,DAZ2,TTTY4	1200,1200,-263565,1200
chrY:27243311-27245201	chrY	-	25083751	25085139	False	NR_002178,NR_002177,NM_004081,NR_001525	chrY,chrY,chrY,chrY	+,+,-,+	TTTY4B,TTTY4C,DAZ1,TTTY4	-1200,-1200,260153,-1200
chrY:27243311-27245201	chrY	-	26717498	26718886	False	NR_002178,NM_020364,NR_002177,NR_001525	chrY,chrY,chrY,chrY	+,-,+,+	TTTY4B,DAZ3,TTTY4C,TTTY4	-1200,240806,-1200,-1200
chr19:51537033-51537826	chr19	+	51537088	51537866	True	NM_145894,NM_145895,NM_001136032,NM_019598,NM_001167605,NM_006853,NM_144947,NM_014441	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,+	KLK12,KLK12,KLK11,KLK12,KLK11,KLK11,KLK11,SIGLEC9	332,332,-7216,332,-5798,-5798,-6203,90270
chr10:47747614-47747865	chr10	+	47747655	47747823	True	NR_024495,NM_001630	chr10,chr10	-,+	LOC642826,ANXA8L2	-504161,-786
chr10:47747614-47747865	chr10	-	47173206	47173374	False	NM_001137549,NM_001137548,NM_005972,NM_001137556,NM_001098845,NM_001040084	chr10,chr10,chr10,chr10,chr10,chr10	-,-,+,-,-,-	FAM25G,FAM25C,PPYR1,FAM25B,ANXA8L1,ANXA8	8364,8364,-89723,8364,716,798
chr10:47747614-47747865	chr10	+	48255972	48256140	False	NM_001137549,NM_001137548,NM_001137556,NM_001098845,NM_001040084,NM_002900	chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,-	FAM25G,FAM25C,FAM25B,ANXA8L1,ANXA8,RBP3	-8361,-8361,-8361,-716,-798,134901
chr10:47747614-47747865	chr10	-	49199025	49199193	False	NM_001137549,NM_001137548,NM_002750,NM_001137556	chr10,chr10,chr10,chr10	-,-,+,-	FAM25G,FAM25C,MAPK8,FAM25B	8682,8682,410493,8682
chr10:103893811-103894339	chr10	+	103893826	103894280	True	NM_001113407,NM_015062	chr10,chr10	-,+	LDB1,PPRC1	-13616,-1090
chr12:133532976-133533286	chr12	+	133533013	133533339	True	NM_183238,NM_019591,NM_001164715	chr12,chr12,chr12	-,+,-	ZNF605,ZNF26,ZNF605	-145,29716,-121
chr2:235864608-235865356	chr2	+	235864622	235865136	True	NM_014521,NM_005737	chr2,chr2	+,-	SH3BP4,ARL4C	-4045,-458929
chrX:31507543-31508399	chrX	+	31507566	31508345	True	NM_203391,NM_004014	chrX,chrX	+,-	GK,DMD	-836150,18123
chr7:120690811-120692572	chr7	+	120691248	120692605	True	NM_001105533,NM_012338	chr7,chr7	+,-	C7orf58,TSPAN12	-61854,-193071
chr19:50832629-50833166	chr19	+	50832844	50833214	True	NM_004977,NM_007121	chr19,chr19	-,+	KCNC3,NR1H2	-210,46470
chr14:76455154-76455718	chr14	+	76455247	76455755	True	NM_001102564,NM_052873,NM_003239	chr14,chr14,chr14	+,+,-	C14orf179,C14orf179,TGFB3	-3202,-3202,-7155
chr16:20752306-20752693	chr16	+	20752362	20752692	True	NM_202000,NM_017736	chr16,chr16	+,-	ACSM3,THUMPD1	22619,557
chr9:109938359-109939427	chr9	+	109938710	109939412	True	NM_002874,NR_031752	chr9,chr9	+,-	RAD23B,MIR548Q	106131,-89994
chr20:24447594-24448857	chr20	+	24448020	24448892	True	NM_024893,NM_178311	chr20,chr20	+,-	TMEM90B,GGTLC1	942,-478604
chr5:68711678-68713166	chr5	+	68711698	68713081	True	NM_001015892,NM_001038603	chr5,chr5	-,+	TAF9,MARVELD2	-45858,-810
chr20:61867018-61867347	chr20	+	61867112	61867198	True	NM_022161,NM_139317,NR_036163,NM_152864	chr20,chr20,chr20,chr20	+,+,+,-	BIRC7,BIRC7,MIR3196,NKAIN4	77,77,2932,18744
chr11:17372360-17373106	chr11	+	17372475	17373056	True	NM_000525,NM_001202439	chr11,chr11	-,+	KCNJ11,DKFZp686O24166	37200,252
chr11:60736285-60737717	chr11	+	60736496	60737745	True	NR_027391,NM_006725	chr11,chr11	-,+	SLC15A3,CD6	-17239,1369
chr1:175713183-175713520	chr1	+	175713208	175713554	True	NM_003285,NM_022093	chr1,chr1	-,+	TNR,TNN	-456,-676265
chr3:197515021-197515324	chr3	+	197515104	197515166	True	NM_001145642,NM_032773	chr3,chr3	-,+	KIAA0226,LRCH3	-38536,2978
chr9:20622648-20622849	chr9	+	20622648	20622856	True	NM_004529,NM_017794	chr9,chr9	-,+	MLLT3,KIAA1797	-134,35452
chr14:24457127-24457941	chr14	+	24457493	24457947	True	NR_023922,NM_198083	chr14,chr14	-,+	C14orf167,DHRS4L2	-33195,79
chr9:139556618-139556856	chr9	+	139556786	139556900	True	NM_201446,NM_016215,NR_029695,NM_001012727	chr9,chr9,chr9,chr9	+,+,+,-	EGFL7,EGFL7,MIR126,AGPAT2	476,481,8153,25061
chr6:149888299-149888699	chr6	+	149888345	149888597	True	NM_139126,NM_138785	chr6,chr6	-,+	PPIL4,C6orf72	-21174,-868
chr2:9772443-9772842	chr2	+	9772447	9772845	True	NM_006826,NM_001039613	chr2,chr2	-,+	YWHAQ,IAH1	-1341,-157828
chr14:73600993-73602234	chr14	+	73601119	73602071	True	NM_007318,NM_000021,NM_021260	chr14,chr14,chr14	+,+,-	PSEN1,PSEN1,ZFYVE1	1071,1071,-107199
chr4:71320117-71320970	chr4	+	71320227	71320922	True	NM_144646,NM_001145007	chr4,chr4	-,+	IGJ,MUC7	211485,16752
chrX:130412586-130413190	chrX	+	130412610	130413135	True	NM_144967,NM_001170963	chrX,chrX	+,-	ARHGAP36,IGSF1	-220445,9950
chr14:23285638-23286897	chr14	+	23285740	23286295	True	NM_178336,NM_001126105,NM_003982,NM_001126106	chr14,chr14,chr14,chr14	+,-,-,-	MRPL52,SLC7A7,SLC7A7,SLC7A7	12796,-668,-668,2782
chr15:90895980-90896290	chr15	+	90896065	90896199	True	NR_028287,NM_001004309	chr15,chr15	-,+	GABARAPL3,ZNF774	-3386,-639
chr1:155559917-155560491	chr1	+	155559921	155560427	True	NM_018116,NM_018489	chr1,chr1	+,-	MSTO1,ASH1L	19579,-27597
chr16:774070-774392	chr16	+	774089	774383	True	NM_001031737,NM_023933,NM_032304,NM_024042	chr16,chr16,chr16,chr16	-,+,+,+	CCDC78,FAM173A,HAGHL,METRN	2140,-2982,2882,-8967
chr3:38395852-38397608	chr3	+	38396342	38397372	True	NM_005108,NR_028389	chr3,chr3	+,-	XYLB,LOC100128640	-8152,98992
chr1:229629799-229631110	chr1	+	229629906	229630857	True	NM_018230,NM_014777	chr1,chr1	-,+	NUP133,URB2	13282,131123
chr5:10563192-10563427	chr5	+	10563266	10563418	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	1016,198019
chr10:86004074-86005036	chr10	+	86004191	86004783	True	NM_001012720,NM_001012722,NM_015613,NM_002921	chr10,chr10,chr10,chr10	+,+,-,+	RGR,RGR,LRIT1,RGR	25,25,-2974,25
chr2:61372056-61372301	chr2	+	61372092	61372294	True	NR_036496,NM_001143960	chr2,chr2	-,+	LOC339803,C2orf74	18,-16
chr18:43915223-43917024	chr18	+	43915890	43917002	True	NM_001173129,NM_152470	chr18,chr18	-,+	LOXHD1,RNF165	182098,-1754
chr2:131099596-131099817	chr2	+	131099654	131099790	True	NM_033416,NM_032357	chr2,chr2	+,-	IMP4,CCDC115	698,182
chr22:35938760-35940354	chr22	+	35938835	35940269	True	NM_005368,NM_014310	chr22,chr22	-,+	MB,RASD2	73165,-1534
chr16:30959026-30959358	chr16	+	30959187	30959363	True	NM_014712,NM_152288,NR_024348	chr16,chr16,chr16	+,+,-	SETD1A,ORAI3,FBXL19-AS1	9251,1041,-24597
chr1:220702598-220703049	chr1	+	220702685	220703069	True	NM_012414,NM_018650	chr1,chr1	-,+	RAB3GAP2,MARK1	-256842,-1169
chr14:77424775-77425406	chr14	+	77424810	77425398	True	NM_194287,NM_024496	chr14,chr14	+,-	C14orf166B,IRF2BPL	-132136,69686
chr2:178262799-178263301	chr2	+	178262857	178263303	True	NM_003659,NR_026966	chr2,chr2	+,-	AGPS,LOC100130691	-5437,-5438
chr4:2758896-2759353	chr4	+	2758951	2759350	True	NM_001122681,NM_001161527,NM_024309	chr4,chr4,chr4	+,-,-	SH3BP2,TNIP2,TNIP2	35399,-1199,-848
chr19:40950635-40951189	chr19	+	40950685	40951168	True	NM_013368,NM_020971,NM_203344	chr19,chr19,chr19	-,+,-	SERTAD3,SPTBN4,SERTAD3	-2180,21957,-403
chr15:80263130-80264270	chr15	+	80263252	80263665	True	NM_001114735,NR_028330,NM_004049	chr15,chr15,chr15	-,+,-	BCL2A1,C15orf37,BCL2A1	29,-48190,29
chr8:25278381-25279810	chr8	+	25278660	25279761	True	NM_000825,NM_001083111,NM_152562	chr8,chr8,chr8	-,-,+	GNRH1,GNRH1,CDCA2	2852,2852,36751
chr12:72152106-72154011	chr12	+	72152151	72153774	True	NM_014999,NR_024072	chr12,chr12	+,-	RAB21,MRS2P2	-3557,91042
chr19:19174486-19174847	chr19	+	19174525	19174747	True	NM_001017392,NM_178526	chr19,chr19	-,+	SUGP2,SLC25A42	-30145,55
chr7:5864608-5865624	chr7	+	5864724	5865549	True	NM_207116,NR_023382	chr7,chr7	-,+	RNF216,ZNF815	-43363,-1998
chr9:131216982-131217379	chr9	+	131217104	131217307	True	NR_029837,NM_153439,NM_153435,NM_153437,NM_153436,NM_153433,NM_153432,NM_153440,NR_036757,NR_036756,NR_036755,NR_036754	chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9	-,+,+,+,+,+,+,+,+,+,+,+	MIR219-2,ODF2,ODF2,ODF2,ODF2,ODF2,ODF2,ODF2,ODF2,ODF2,ODF2,ODF2	-62111,977,977,1878,126,1371,977,1371,977,977,977,977
chr12:32651895-32652259	chr12	+	32651989	32652277	True	NM_001040436,NM_139241	chr12,chr12	-,+	YARS2,FGD4	256660,2763
chr19:48384586-48385026	chr19	+	48384741	48385065	True	NM_003167,NR_004437	chr19,chr19	-,+	SULT2A1,SNAR-A12	4639,25869
chr4:152020696-152020945	chr4	+	152020742	152020976	True	NR_000007,NM_001006,NM_001128924	chr4,chr4,chr4	+,+,-	SNORD73A,RPS3A,SH3D19	4002,-39,75778
chr3:195719240-195720195	chr3	+	195719428	195720133	True	NR_034088,NR_003264	chr3,chr3	+,-	LOC401109,SDHAP1	149373,-2278
chr3:195719240-195720195	chr3	-	195381968	195382018	False	NM_001647,NR_003265	chr3,chr3	-,+	APOD,SDHAP2	-70892,2891
chr11:76568298-76569950	chr11	+	76569021	76569663	True	NM_018367,NR_024042	chr11,chr11	+,-	ACER3,GUCY2E	2253,-136188
chr12:20521131-20521638	chr12	+	20521139	20521522	True	NM_000921,NM_021094	chr12,chr12	+,-	PDE3A,SLCO1A2	674,966360
chr4:122616637-122616977	chr4	+	122616637	122616821	True	NR_024365,NM_001154	chr4,chr4	+,-	LOC100192379,ANXA5	68918,1376
chr10:91296016-91296250	chr10	+	91296064	91296268	True	NM_213606,NM_012420	chr10,chr10	-,+	SLC16A12,IFIT5	-751,-121790
chr2:211341124-211341343	chr2	+	211341234	211341352	True	NM_001136575,NM_001136574,NM_006055,NM_001122633	chr2,chr2,chr2,chr2	-,-,-,+	LANCL1,LANCL1,LANCL1,CPS1	197,127,189,1053
chrX:106960376-106960876	chrX	+	106960428	106960912	True	NM_001015881,NM_002764,NM_004089	chrX,chrX,chrX	-,+,-	TSC22D3,PRPS1,TSC22D3	-717,-88826,-137
chr1:6299170-6300383	chr1	+	6299268	6300382	True	NM_012405,NM_001024598	chr1,chr1	-,+	ICMT,HES3	-3224,3869
chr17:7461773-7462428	chr17	+	7462067	7462462	True	NM_172087,NM_003808,NM_003809,NR_037926,NM_172089,NM_172088,NM_006942,NM_001198624,NM_015670,NM_001198623,NM_001198622,NR_037146	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,+,-,+,+,+,+,+	TNFSF13,TNFSF13,TNFSF12,SENP3-EIF4A1,TNFSF12-TNFSF13,TNFSF13,SOX15,TNFSF13,SENP3,TNFSF13,TNFSF13,TNFSF12	-509,-509,-9743,2846,-9743,-509,31076,-509,2846,-509,-509,-9743
chr3:49507147-49507391	chr3	+	49507152	49507324	True	NM_001177639,NM_001177638,NM_001177635,NM_001177634,NM_001177637,NM_001177636,NM_004393,NM_001165928,NM_032316,NM_001177644,NM_001177640,NM_001177641,NM_001177642,NM_001177643	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,+,+,+,+,-,+,+,+,+,+	DAG1,DAG1,DAG1,DAG1,DAG1,DAG1,DAG1,DAG1,NICN1,DAG1,DAG1,DAG1,DAG1,DAG1	240,240,240,240,240,240,240,240,-40395,240,240,240,240,-1057
chr17:63558156-63558787	chr17	+	63558243	63558677	True	NM_004655,NM_003835	chr17,chr17	-,+	AXIN2,RGS9	-503,-424838
chr2:15731192-15731644	chr2	+	15731200	15731659	True	NM_004939,NM_015909	chr2,chr2	+,-	DDX1,NBAS	110,-29746
chr10:75573633-75573910	chr10	+	75573683	75573791	True	NM_015037,NM_003635	chr10,chr10	+,-	KIAA0913,NDST2	-28129,-2094
chr17:74557642-74558382	chr17	+	74557685	74558268	True	NM_006456,NM_134268,NR_004396,NR_004397,NR_004395	chr17,chr17,chr17,chr17,chr17	-,-,+,+,+	ST6GALNAC2,CYGB,SNORD1B,SNORD1C,SNORD1A	23927,-23903,-552,-2868,-27
chr9:12774919-12775588	chr9	+	12774930	12775594	True	NM_203403,NM_003829	chr9,chr9	+,-	C9orf150,MPDZ	31,474821
chr1:117214072-117215012	chr1	+	117214101	117214839	True	NR_031564,NM_001007237,NM_001542	chr1,chr1,chr1	+,-,-	MIR320B1,IGSF3,IGSF3	-70,-3787,-3787
chr5:94906778-94908202	chr5	+	94906984	94908039	True	NM_014639,NM_198150	chr5,chr5	-,+	TTC37,ARSK	-16275,-16211
chr19:36207707-36208083	chr19	+	36207712	36207970	True	NM_014727,NM_024660,NM_014383	chr19,chr19,chr19	+,-,+	MLL4,IGFLR1,ZBTB32	950,25431,-3933
chr4:8583076-8583296	chr4	+	8583105	8583345	True	NM_003501,NM_080819	chr4,chr4	-,+	ACOX3,GPR78	-140653,-865
chr9:89562902-89563672	chr9	+	89562982	89563656	True	NM_002048,NM_001001709	chr9,chr9	-,+	GAS1,C9orf170	-878,199902
chr7:66046660-66047062	chr7	+	66046701	66046979	True	NM_001167961,NR_002933	chr7,chr7	+,-	KCTD7,LOC493754	46888,-3203
chr12:56323381-56324309	chr12	+	56323468	56324039	True	NM_001345,NM_032345,NM_001143853,NM_201554,NM_201444,NM_201445	chr12,chr12,chr12,chr12,chr12,chr12	+,-,-,+,+,+	DGKA,WIBG,WIBG,DGKA,DGKA,DGKA	906,-1771,-2559,1772,1772,1772
chr11:16463387-16464735	chr11	+	16463448	16464724	True	NM_001145811,NM_014267,NM_033326	chr11,chr11,chr11	-,+,-	SOX6,C11orf58,SOX6	-33018,295423,33267
chr17:37354018-37354292	chr17	+	37354269	37354333	True	NM_199248,NM_000981,NM_000723,NM_199247	chr17,chr17,chr17,chr17	-,+,-,-	CACNB1,RPL19,CACNB1,CACNB1	-368,2202,-368,-368
chr16:81273485-81274233	chr16	+	81273552	81273655	True	NM_017429,NM_001076780	chr16,chr16	+,-	BCMO1,PKD1L2	-1315,-19577
chr5:56239666-56240230	chr5	+	56239726	56239991	True	NM_001171990,NM_152622	chr5,chr5	+,-	C5orf35,MIER3	-34699,8014
chr11:67289628-67290198	chr11	+	67289644	67290056	True	NM_003977,NM_016366	chr11,chr11	+,-	AIP,CABP2	-39190,893
chr20:62373134-62373485	chr20	+	62373151	62373532	True	NM_020062,NM_003224,NM_017806	chr20,chr20,chr20	+,-,+	SLC2A4RG,ARFRP1,LIME1	-1991,-33796,-5224
chr12:121403142-121404700	chr12	+	121403430	121404744	True	NR_024345,NM_000545	chr12,chr12	-,+	NCRNA00262,HNF1A	5414,11804
chr15:45719463-45719745	chr15	+	45719654	45719735	True	NM_001482,NM_197955,NR_030599,NM_032413	chr15,chr15,chr15,chr15	-,+,+,+	GATM,C15orf48,MIR147B,C15orf48	-48674,3027,5512,3027
chr12:38472775-38473180	chr12	+	38472788	38472882	True	NM_001013620,NM_153634	chr12,chr12	+,-	ALG10B,CPNE8	237674,826588
chr17:26694367-26694874	chr17	+	26694455	26694839	True	NM_015584,NM_001080837,NM_000638,NM_152464,NM_015077	chr17,chr17,chr17,chr17,chr17	-,-,-,+,+	POLDIP2,SEBOX,VTN,TMEM199,SARM1	-9852,-2190,2584,-9819,4147
chr1:38326537-38327427	chr1	+	38326811	38327103	True	NM_198446,NM_005955	chr1,chr1	+,-	C1orf122,MTF1	-53389,-1519
chr6:151708672-151710121	chr6	+	151708682	151710161	True	NM_144497,NM_020861,NM_024573	chr6,chr6,chr6	+,-,+	AKAP12,ZBTB2,C6orf211	-62067,2566,63260
chr17:41002329-41003165	chr17	+	41002404	41003163	True	NM_001158,NM_003734,NM_009590,NM_003766	chr17,chr17,chr17,chr17	+,+,+,-	AOC2,AOC3,AOC2,BECN1	-5848,37,-5848,-26094
chr14:71949308-71950596	chr14	+	71949543	71950611	True	NR_027046,NM_033141	chr14,chr14	+,-	LOC145474,MAP3K9	3966,-673655
chr15:28579959-28580451	chr15	+	28580077	28580289	True	NM_004667,NR_033351	chr15,chr15	-,+	HERC2,GOLGA8F	-12782,43494
chr15:28579959-28580451	chr15	-	28821630	28821842	False	NR_036443,NR_033351	chr15,chr15	+,-	HERC2P9,GOLGA8F	77745,-43487
chr15:28579959-28580451	chr15	+	20724220	20724408	False	NR_036432,NR_027411	chr15,chr15	-,+	HERC2P3,GOLGA8C	-12787,43265
chr15:28579959-28580451	chr15	+	23391013	23391201	False	NR_036470,NR_002824	chr15,chr15	+,-	HERC2P7,HERC2P2	-342,-12754
chr15:28579959-28580451	chr15	+	23678712	23678900	False	NM_005664,NM_019066	chr15,chr15	+,-	MKRN3,MAGEL2	131553,214145
chr13:24732931-24734316	chr13	+	24733010	24734269	True	NM_153023,NR_031753,NM_001166271,NM_001007537	chr13,chr13,chr13,chr13	+,+,+,-	SPATA13,MIR2276,SPATA13,C1QTNF9B	591,2285,591,-261885
chr7:130799550-130800784	chr7	+	130799728	130800763	True	NR_015431,NM_001145354,NR_024153	chr7,chr7,chr7	-,+,-	FLJ43663,MKLN1,FLJ43663	-6166,-4929,-7939
chr15:72524010-72524235	chr15	+	72524013	72524241	True	NM_182471,NM_182470,NM_002654,NM_145204	chr15,chr15,chr15,chr15	-,-,-,+	PKM2,PKM2,PKM2,SENP8	-329,-329,-329,-113433
chr19:37994328-37995403	chr19	+	37994646	37995223	True	NM_001013659,NM_152484	chr19,chr19	+,-	ZNF793,ZNF569	2617,-36307
chr16:33206262-33206689	chr16	+	33206347	33206668	True	NM_001205260,NM_001205265,NM_001205259,NM_001099687,NM_016212,NR_033866	chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,-	LOC653550,TP53TG3B,LOC653550,TP53TG3B,TP53TG3,LOC390705	-813,-813,-813,-813,-1418,92085
chr16:33206262-33206689	chr16	+	33262882	33263203	False	NM_001205260,NM_001205265,NM_001205259,NM_001099687,NM_016212,NR_033866	chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,-	LOC653550,TP53TG3B,LOC653550,TP53TG3B,TP53TG3,LOC390705	-813,-813,-813,-813,-1418,35550
chr16:33206262-33206689	chr16	+	32265407	32265695	False	NR_033866,NM_003414	chr16,chr16	-,+	LOC390705,ZNF267	35657,-380379
chr16:33206262-33206689	chr16	-	32686364	32686685	False	NM_001205260,NM_016212,NM_001099687,NM_001205259,NM_001205265	chr16,chr16,chr16,chr16,chr16	-,-,-,-,-	LOC653550,TP53TG3,TP53TG3B,LOC653550,TP53TG3B	813,1418,813,813,813
chr11:111847089-111847467	chr11	+	111847138	111847436	True	NM_001885,NM_033425	chr11,chr11	-,+	CRYAB,DIXDC1	-64665,596
chr1:192146781-192147171	chr1	+	192146780	192147102	True	NM_130782,NM_001199261	chr1,chr1	+,-	RGS18,UCHL5	-19249,881485
chr6:7585747-7585961	chr6	+	7585838	7585956	True	NM_152551,NM_001170693	chr6,chr6	+,-	SNRNP48,CAGE1	4475,-195896
chr11:68816148-68816531	chr11	+	68816151	68816477	True	NM_139075,NM_145015	chr11,chr11	+,-	TPCN2,MRGPRF	-30,-35301
chr10:46225648-46226158	chr10	+	46225831	46226079	True	NM_174890,NM_015262,NM_001169106,NM_001169107	chr10,chr10,chr10,chr10	-,+,+,+	ANUBL1,FAM21C,FAM21C,FAM21C	-57580,-3242,-3242,-3242
chr10:46225648-46226158	chr10	+	51830829	51831077	False	NM_018232,NM_001005751,NM_001143974	chr10,chr10,chr10	+,+,-	FAM21B,FAM21A,ASAH2	6808,-3204,177343
chr11:133734117-133734320	chr11	+	133734219	133734355	True	NM_174927,NR_027276	chr11,chr11	-,+	SPATA19,LOC100128239	-18827,167811
chr1:24035109-24035403	chr1	+	24035200	24035364	True	NM_001199802,NM_001127621	chr1,chr1	+,-	RPL11,GALE	-16989,90746
chr13:42027491-42028429	chr13	+	42027526	42028314	True	NM_014059,NM_004294	chr13,chr13	+,-	C13orf15,MTRF1	3227,-189813
chr1:55264061-55265424	chr1	+	55264154	55265408	True	NM_152607,NM_001114108,NM_001110533,NM_017904	chr1,chr1,chr1,chr1	+,-,+,-	C1orf177,TTC22,C1orf177,TTC22	6327,1583,6327,1583
chr2:225607166-225608008	chr2	+	225607289	225607960	True	NM_003590,NM_020864	chr2,chr2	-,+	CUL3,KIAA1486	-157179,657641
chr7:6865028-6865228	chr7	+	6865175	6865255	True	NM_198097,NM_173565	chr7,chr7	-,+	C7orf28B,RSPH10B	721,-71486
chr7:6865028-6865228	chr7	-	5939031	5939111	False	NM_001099697,NM_015622	chr7,chr7	-,+	RSPH10B2,CCZ1	71253,-741
chr19:15121655-15122279	chr19	+	15121710	15122176	True	NM_173482,NM_005071	chr19,chr19	+,-	CCDC105,SLC1A6	-222,-37980
chr19:44807591-44809108	chr19	+	44807619	44808827	True	NM_004234,NM_181756	chr19,chr19	-,+	ZNF235,ZNF233	401,-43594
chr3:194393197-194393995	chr3	+	194393204	194393838	True	NM_018385,NM_153690	chr3,chr3	-,+	LSG1,FAM43A	2,12783
chr3:185083568-185085130	chr3	+	185083568	185085172	True	NM_001966,NM_004721	chr3,chr3	-,+	EHHADH,MAP3K13	-111682,-2649
chr18:57363284-57363760	chr18	+	57363286	57363784	True	NM_133459,NM_021127	chr18,chr18	-,+	CCBE1,PMAIP1	910,203407
chr20:23112461-23112998	chr20	+	23112489	23112953	True	NR_034149,NM_001052	chr20,chr20	-,+	LOC200261,SSTR4	370,-96483
chr8:143827147-143827769	chr8	+	143827224	143827746	True	NM_016647,NM_020427,NM_205545	chr8,chr8,chr8	+,-,-	C8orf55,SLURP1,LYPD2	-18654,-3395,6256
chr7:74685751-74686254	chr7	+	74686024	74686154	True	NM_001003795,NR_003580	chr7,chr7	+,-	GTF2IRD2B,LOC100093631	-177728,-32565
chr7:74685751-74686254	chr7	+	99885985	99886136	False	NM_001004351,NR_028038	chr7,chr7	+,-	SPDYE3,GATS	19188,-16130
chr7:74685751-74686254	chr7	-	72536481	72536611	False	NR_003664,NR_003580	chr7,chr7	-,+	SPDYE8P,LOC100093631	-36172,32400
chr7:74685751-74686254	chr7	-	74345975	74346105	False	NM_001025202,NM_001145063	chr7,chr7	-,+	STAG3L2,GATSL1	-39244,32977
chr7:74685751-74686254	chr7	+	74900281	74900411	False	NM_001145064,NR_003664	chr7,chr7	-,+	GATSL2,SPDYE8P	-32940,36121
chr19:12170477-12170717	chr19	+	12170573	12170772	True	NM_001136501,NM_001080404	chr19,chr19	+,-	ZNF844,ZNF878	4773,-3446
chr1:225642011-225643453	chr1	+	225642068	225643345	True	NM_194442,NM_001130440	chr1,chr1	-,+	LBR,SRP9	-25511,322169
chr2:128433438-128433797	chr2	+	128433464	128433832	True	NM_001161404,NM_001136037,NM_001161403,NM_032740	chr2,chr2,chr2,chr2	-,-,-,+	LIMS2,LIMS2,LIMS2,SFT2D3	5579,-700,-700,24764
chrX:67719068-67719775	chrX	+	67719077	67719823	True	NM_173834,NM_002547,NM_001195214	chrX,chrX,chrX	+,-,+	YIPF6,OPHN1,YIPF6	-504,-65778,-504
chr2:127961764-127962560	chr2	+	127962192	127962556	True	NM_001001665,NM_000312	chr2,chr2	-,+	CYP27C1,PROC	837,213439
chr13:25845339-25846235	chr13	+	25845443	25846253	True	NM_001008564,NM_004685	chr13,chr13	+,-	NUPL1,MTMR6	29412,15507
chr7:139040978-139042559	chr7	+	139041204	139042305	True	NM_016019,NR_033999	chr7,chr7	+,-	LUC7L2,LOC100129148	2328,70029
chr1:26513387-26514272	chr1	+	26513673	26514102	True	NM_198137,NM_001077262,NM_006314,NR_023345	chr1,chr1,chr1,chr1	+,-,+,+	CATSPER4,UBXN11,CNKSR1,CNKSR1	3016,119144,-9743,-9742
chr4:648067-648706	chr4	+	648264	648704	True	NM_007100,NM_001145292	chr4,chr4	-,+	ATP5I,PDE6B	19473,-1349
chr5:140339613-140341263	chr5	+	140339877	140341319	True	NM_018899,NM_031883,NM_002109	chr5,chr5,chr5	+,+,-	PCDHAC2,PCDHAC2,HARS	4427,5032,-268906
chr2:26098815-26100036	chr2	+	26099040	26100060	True	NM_018263,NM_016131	chr2,chr2	-,+	ASXL2,RAB10	1303,156668
chr1:26437295-26437580	chr1	+	26437310	26437444	True	NR_026685,NR_026686,NM_032588,NM_152835	chr1,chr1,chr1,chr1	+,+,-,+	PDIK1L,PDIK1L,TRIM63,PDIK1L	211,823,-43189,823
chr5:55405767-55407005	chr5	+	55406421	55406980	True	NM_139017,NM_175767	chr5,chr5	+,-	IL31RA,IL6ST	-259148,-115600
chr18:76863993-76864902	chr18	+	76864090	76864715	True	NM_198531,NM_001146343	chr18,chr18	+,-	ATP9B,PQLC1	-34744,846994
chr3:15140079-15140545	chr3	+	15140117	15140425	True	NM_022340,NM_014296	chr3,chr3	-,+	ZFYVE20,CAPN7	280,107307
chr19:55661143-55661470	chr19	+	55661257	55661499	True	NM_017729,NM_001126132,NM_001126133,NM_000363,NM_003283	chr19,chr19,chr19,chr19,chr19	+,-,-,-,-	EPS8L1,TNNT1,TNNT1,TNNI3,TNNT1	-69548,-651,-651,7651,-651
chr17:72624261-72625066	chr17	+	72624430	72624984	True	NM_181449,NM_175738	chr17,chr17	-,+	CD300E,RAB37	-4533,42271
chr9:46117416-46117861	chr9	+	46117439	46117907	True	NM_001145196,NR_024060	chr9,chr9	-,+	FAM75A6,FAM27A	-2486709,-390461
chr9:46117416-46117861	chr9	-	67785675	67786131	False	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	8108,140629
chr9:46117416-46117861	chr9	+	44998269	44998725	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-8084,-1367539
chr9:46117416-46117861	chr9	-	46386408	46386876	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2755678,300689
chr9:46117416-46117861	chr9	+	45733644	45734164	False	NM_001145196,NR_024060	chr9,chr9	-,+	FAM75A6,FAM27A	-2102914,-6930
chr6:29798385-29799290	chr6	+	29798545	29799127	True	NM_002127,NR_002139	chr6,chr6	+,-	HLA-G,HCG4	-3840,-37695
chr6:29798385-29799290	chr6_mann_hap4	+	1098874	1098938	False	NM_002127,NR_002139	chr6_mann_hap4,chr6_mann_hap4	+,-	HLA-G,HCG4	-3839,-37605
chr6:29798385-29799290	chr6_dbb_hap3	+	1099166	1099230	False	NM_002127,NR_002139	chr6_dbb_hap3,chr6_dbb_hap3	+,-	HLA-G,HCG4	-3840,-37523
chr6:29798385-29799290	chr6_mcf_hap5	+	1098824	1098888	False	NM_002127,NR_002139	chr6_mcf_hap5,chr6_mcf_hap5	+,-	HLA-G,HCG4	-3840,-37515
chr6:29798385-29799290	chr6_ssto_hap7	+	1136097	1136161	False	NM_002127,NR_002139	chr6_ssto_hap7,chr6_ssto_hap7	+,-	HLA-G,HCG4	-3854,-37575
chr6:29798385-29799290	chr6_qbl_hap6	+	1099130	1099208	False	NM_002127,NR_002139	chr6_qbl_hap6,chr6_qbl_hap6	+,-	HLA-G,HCG4	-3854,-37499
chr19:55720532-55720815	chr19	+	55720552	55720692	True	NM_032430,NM_001161440,NM_002842	chr19,chr19,chr19	+,-,-	BRSK1,PTPRH,PTPRH	74841,232,232
chr18:56356238-56357746	chr18	+	56356700	56357586	True	NM_052947,NM_173844	chr18,chr18	-,+	ALPK2,MALT1	-60511,-18133
chr19:2819763-2820004	chr19	+	2819766	2820000	True	NM_003021,NM_001102651	chr19,chr19	-,+	SGTA,ZNF554	-36412,55
chr19:57970616-57971537	chr19	+	57971271	57971507	True	NM_020633,NM_001023561	chr19,chr19	-,+	VN1R1,ZNF749	-3164,-24636
chr8:79578974-79579411	chr8	+	79578981	79579448	True	NM_016010,NM_000880	chr8,chr8	+,-	FAM164A,IL7	-750,138361
chr1:220378100-220379001	chr1	+	220378682	220379002	True	NM_018060,NR_002994,NR_031705	chr1,chr1,chr1	+,-,-	IARS2,SNORA36B,MIR664	-111278,-4664,-4721
chr7:140615393-140616951	chr7	+	140615630	140616433	True	NM_001195278,NM_004333	chr7,chr7	+,-	LOC100131199,BRAF	157598,8188
chr18:77906404-77906648	chr18	+	77906429	77906640	True	NM_032510,NR_028339	chr18,chr18	-,+	PARD6G,LOC100130522	98808,-673
chr8:145203588-145203929	chr8	+	145203634	145203974	True	NM_030974,NM_032450,NM_001099281,NM_001099280	chr8,chr8,chr8,chr8	-,+,+,+	SHARPIN,HEATR7A,HEATR7A,HEATR7A	-44494,-766,-766,-766
chr8:145203588-145203929	chr8	+	145448842	145449182	False	NM_016458,NM_015201	chr8,chr8	+,-	FAM203A,BOP1	-11013,65988
chr4:185569250-185569591	chr4	+	185569314	185569626	True	NM_152683,NM_032991,NM_004346	chr4,chr4,chr4	+,-,-	CCDC111,CASP3,CASP3	1140,1053,1053
chr1:51803189-51804433	chr1	+	51803437	51804273	True	NM_014372,NM_001144832	chr1,chr1	+,-	RNF11,TTC39A	-101552,6562
chr5:160226007-160227072	chr5	+	160226064	160226991	True	NR_029701,NM_025153	chr5,chr5	+,-	MIR146A,ATP10B	-313764,52285
chr17:20526757-20527349	chr17	+	20526921	20527238	True	NM_001190790,NR_029393	chr17,chr17	+,-	CDRT15L2,KRT16P3	-43936,-119110
chr11:64862498-64862806	chr11	+	64862520	64862589	True	NM_013265,NM_080668	chr11,chr11	+,-	C11orf2,CDCA5	1093,-10905
chr6:167648194-167648913	chr6	+	167648469	167648649	True	NM_005299,NM_001143947	chr6,chr6	-,+	GPR31,UNC93A	-77150,56153
chr11:6627325-6628349	chr11	+	6627445	6628354	True	NM_015324,NM_001014794,NM_001014795,NM_004517,NM_006284	chr11,chr11,chr11,chr11,chr11	-,+,+,+,-	RRP8,ILK,ILK,ILK,TAF10	-2634,-2532,-2289,-2532,5141
chrX:52684939-52685140	chrX	+	52685012	52685072	True	NR_027250,NM_173358	chrX,chrX	+,-	SSX8,SSX7	-33079,-1062
chrX:30891062-30891374	chrX	+	30891079	30891329	True	NM_203391,NM_152787	chrX,chrX	+,-	GK,TAB3	-219664,16232
chr5:150947568-150948276	chr5	+	150947573	150948265	True	NM_001447,NM_078483	chr5,chr5	-,+	FAT2,SLC36A1	290,-120461
chr7:100318736-100318973	chr7	+	100318881	100318999	True	NM_000799,NM_022574	chr7,chr7	+,-	EPO,GIGYF1	-509,-32011
chr3:5018851-5019399	chr3	+	5018930	5019390	True	NR_037903,NM_003670	chr3,chr3	-,+	LOC100507582,BHLHE40	-70744,1706
chr3:123166235-123166793	chr3	+	123166359	123166765	True	NM_012430,NM_183357	chr3,chr3	+,-	SEC22A,ADCY5	-245636,677
chr12:120764236-120764493	chr12	+	120764259	120764501	True	NM_000928,NM_012240	chr12,chr12	-,+	PLA2G1B,SIRT4	1145,-24195
chr22:21985432-21986236	chr22	+	21985486	21986014	True	NM_152612,NM_001017964	chr22,chr22	+,-	CCDC116,YDJC	1071,-1146
chr16:75654280-75654534	chr16	+	75654377	75654479	True	NR_036460,NM_012091,NM_018975	chr16,chr16,chr16	-,-,+	ADAT1,ADAT1,TERF2IP	2792,2792,27155
chr2:136294362-136296342	chr2	+	136294664	136295965	True	NM_015361,NM_032143	chr2,chr2	+,-	R3HDM1,ZRANB3	-5634,-5858
chr8:144818607-144819662	chr8	+	144818728	144819604	True	NR_033849,NM_198488	chr8,chr8	+,-	LOC100128338,FAM83H	-2469,-2814
chr8:101308633-101309176	chr8	+	101308751	101309205	True	NM_003114,NM_015435	chr8,chr8	+,-	SPAG1,RNF19A	-138254,6332
chr22:23921038-23921319	chr22	+	23921176	23921318	True	NM_153615,NM_152855,NM_020070	chr22,chr22,chr22	+,-,-	RGL4,IGLL1,IGLL1	111729,1227,1227
chr6:56111736-56112317	chr6	+	56111740	56112314	True	NM_152731,NM_030820	chr6,chr6	+,-	BEND6,COL21A1	707458,114
chr15:85106958-85107741	chr15	+	85107146	85107726	True	NM_017894,NR_003661	chr15,chr15	+,-	ZSCAN2,UBE2Q2P1	36522,6356
chr15:85106958-85107741	chr15	-	84922290	84922346	False	NR_027001,NR_033738	chr15,chr15	-,+	LOC388152,LOC440300	-23370,-61747
chr15:85106958-85107741	chr15	-	85727489	85727894	False	NM_006738,NM_014300	chr15,chr15	+,-	AKAP13,SEC11A	195976,-467815
chr7:44365356-44366205	chr7	+	44365475	44366078	True	NM_172078,NM_172079,NM_172081,NM_172080,NM_172083,NM_172082,NM_172084,NM_001220,NM_006555	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,-,-,-,+	CAMK2B,CAMK2B,CAMK2B,CAMK2B,CAMK2B,CAMK2B,CAMK2B,CAMK2B,YKT6	-245,-245,-245,-245,-245,-245,-245,-245,-124948
chr3:179180346-179182109	chr3	+	179180898	179182146	True	NM_004301,NM_021629	chr3,chr3	+,-	ACTL6A,GNB4	98561,-11527
chr14:64805618-64805952	chr14	+	64805748	64805926	True	NM_005956,NR_033777,NM_001040276	chr14,chr14,chr14	+,-,-	MTHFD1,TEX21P,ESR2	48832,8453,-480
chr2:105471100-105471346	chr2	+	105471114	105471380	True	NM_006236,NR_037883	chr2,chr2	+,-	POU3F3,LOC100506421	588,-3180
chr20:39993226-39993683	chr20	+	39993245	39993639	True	NM_022896,NM_052846	chr20,chr20	+,-	LPIN3,EMILIN3	-23736,1909
chr21:33653526-33653982	chr21	+	33653850	33654030	True	NM_178817,NM_018944	chr21,chr21	+,-	MRAP,MIS18A	10093,-2474
chr19:49944846-49945344	chr19	+	49944928	49945392	True	NM_020309,NM_001145396,NM_017916	chr19,chr19,chr19	-,+,-	SLC17A7,ALDH16A1,PIH1D1	-120,11080,9773
chr12:52777426-52778735	chr12	+	52777468	52778564	True	NM_033045,NM_002284	chr12,chr12	-,+	KRT84,KRT86	903,-81870
chr8:104306740-104307262	chr8	+	104306942	104307276	True	NM_001164616,NM_001164615,NM_003506,NM_030780	chr8,chr8,chr8,chr8	+,+,+,-	FZD6,FZD6,FZD6,SLC25A32	3782,3384,3782,120242
chr4:4225996-4227601	chr4	+	4226367	4227377	True	NM_145291,NM_177998	chr4,chr4	+,-	ZBTB49,OTOP1	64546,1294
chr6:87670281-87671230	chr6	+	87670369	87671271	True	NM_000735,NM_000865	chr6,chr6	-,+	CGA,HTR1E	133609,-23396
chr19:1851348-1851557	chr19	+	1851360	1851596	True	NR_034114,NM_020695	chr19,chr19	+,-	LOC100288123,REXO1	-29323,-2908
chr2:132920009-132921331	chr2	+	132920071	132921229	True	NM_001508,NR_027019	chr2,chr2	+,-	GPR39,ANKRD30BL	252917,-546
chr5:79703080-79703343	chr5	+	79703102	79703356	True	NR_003665,NM_014733,NM_001105251	chr5,chr5,chr5	-,+,+	CRSP8P,ZFYVE16,ZFYVE16	-55317,481,481
chr7:57512198-57513629	chr7	+	57512543	57513073	True	NR_030766,NM_001159279	chr7,chr7	-,+	LOC642006,ZNF716	-264680,-2711
chr5:159843907-159845752	chr5	+	159844476	159845737	True	NM_006425,NM_004219	chr5,chr5	-,+	SLU7,PTTG1	487,3127
chr1:17574609-17574851	chr1	+	17574708	17574784	True	NM_016233,NM_007365	chr1,chr1	+,-	PADI3,PADI2	808,-128760
chr12:49209436-49209637	chr12	+	49209449	49209521	True	NM_000725,NM_020983	chr12,chr12	+,-	CACNB3,ADCY6	2990,-26629
chr1:217820699-217821156	chr1	+	217820723	217821065	True	NM_138796,NM_018040	chr1,chr1	+,-	SPATA17,GPATCH2	-16084,-16314
chr2:242640671-242640930	chr2	+	242640689	242640779	True	NR_033255,NM_032329	chr2,chr2	-,+	DTYMK,ING5	-14306,676
chr9:117550322-117551753	chr9	+	117550355	117551468	True	NM_153045,NM_001204344	chr9,chr9	+,-	C9orf91,TNFSF15	-176712,3399
chr5:92603179-92604105	chr5	+	92603306	92604128	True	NR_015369,NM_005654	chr5,chr5	-,+	FLJ42709,NR2F1	302421,314914
chr5:140531575-140531863	chr5	+	140531630	140531772	True	NR_001280,NM_031947,NM_018939	chr5,chr5,chr5	+,-,+	PCDHB17,SLC25A2,PCDHB6	3807,151890,-1842
chr5:140531575-140531863	chr5	+	140595493	140595571	False	NM_018934,NM_018932,NM_018933,NM_031947	chr5,chr5,chr5,chr5	+,+,+,-	PCDHB14,PCDHB12,PCDHB13,SLC25A2	7506,-7253,-2035,88091
chr19:39826675-39826925	chr19	+	39826692	39826934	True	NM_018028,NM_004877	chr19,chr19	+,-	SAMD4B,GMFG	6173,10
chr6:36098605-36099029	chr6	+	36098613	36099071	True	NM_002754,NM_052961	chr6,chr6	+,-	MAPK13,SLC26A8	-402,-106200
chr17:40196556-40197026	chr17	+	40196659	40196921	True	NM_017595,NR_029431	chr17,chr17	+,-	NKIRAS2,DNAJC7	-24631,-26944
chr1:179558112-179558952	chr1	+	179558359	179559002	True	NM_001199091,NM_001199085,NM_173533,NM_014625,NM_001199089	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	TDRD5,TDRD5,TDRD5,NPHS2,TDRD5	1745,1754,1754,-13275,1986
chr19:53795288-53796842	chr19	+	53795490	53796894	True	NM_001195187,NM_033341	chr19,chr19	+,-	LOC646508,BIRC8	-10730,-615
chr11:413450-414841	chr11	+	413558	414631	True	NM_001135053,NM_007183,NM_021805,NM_001135054	chr11,chr11,chr11,chr11	-,+,-,-	SIGIRR,PKP3,SIGIRR,SIGIRR	2816,-19392,2816,418
chr12:863708-864289	chr12	+	863723	864313	True	NM_001184985,NM_016533,NM_018979,NM_213655,NM_014823	chr12,chr12,chr12,chr12,chr12	+,-,+,+,+	WNK1,NINJ2,WNK1,WNK1,WNK1	-1685,-90968,-1685,-1685,-1685
chr1:155005729-155006972	chr1	+	155005782	155006992	True	NM_152494,NM_144622,NM_001143687	chr1,chr1,chr1	+,-,+	DCST1,DCST2,DCST1	-14,-15,-14
chr21:11140220-11141156	chr21	+	11140252	11140898	True	NM_001187,NR_037458	chr21,chr21	-,+	BAGE,MIR3687	-41315,-1314101
chr2:70782085-70782608	chr2	+	70782181	70782581	True	NM_001099691,NM_016297,NM_003236	chr2,chr2,chr2	-,+,-	TGFA,PCYOX1,TGFA	-1076,-297002,-1076
chr22:32748666-32749071	chr22	+	32748686	32749038	True	NM_006604,NR_001450,NM_001098535	chr22,chr22,chr22	+,-,+	RFPL3,RFPL3S,RFPL3	1833,17984,4815
chr12:118499446-118499684	chr12	+	118499575	118499713	True	NM_018639,NM_181578	chr12,chr12	-,+	WSB2,RFC5	-624,-45118
chr17:75284633-75284909	chr17	+	75284645	75284857	True	NM_001113492,NM_001113491,NR_036200	chr17,chr17,chr17	+,+,-	SEPT9,SEPT9,MIR4316	-723,-7204,108329
chr8:17400362-17400892	chr8	+	17400524	17400936	True	NM_001164771,NM_003046,NM_004686	chr8,chr8,chr8	+,+,-	SLC7A2,SLC7A2,MTMR7	-4297,-4297,-129484
chr12:107457895-107459090	chr12	+	107458224	107458699	True	NM_004075,NM_152261	chr12,chr12	-,+	CRY1,C12orf23	28950,-108731
chr4:5051054-5051607	chr4	+	5051219	5051663	True	NM_018659,NM_018401	chr4,chr4	-,+	CYTL1,STK32B	-30022,1863
chr14:93798081-93798649	chr14	+	93798295	93798668	True	NM_020818,NM_018167,NM_001002860	chr14,chr14,chr14	+,-,-	KIAA1409,BTBD7,BTBD7	896,768,768
chr14:79745995-79746261	chr14	+	79746035	79746309	True	NM_001007023,NM_001105250,NM_138970	chr14,chr14,chr14	-,+,+	DIO2,NRXN3,NRXN3	931584,-432,-432
chr5:54326862-54328279	chr5	+	54326917	54328269	True	NM_002104,NM_007036	chr5,chr5	+,-	GZMK,ESM1	-6861,-45503
chr6:128088327-128089467	chr6	+	128088604	128089501	True	NM_001010923,NM_001010905	chr6,chr6	-,+	THEMIS,C6orf58	132776,-190342
chr8:65488306-65488743	chr8	+	65488309	65488637	True	NM_152414,NR_015374	chr8,chr8	+,-	BHLHE22,LOC401463	4157,1233
chr10:99890163-99891072	chr10	+	99890173	99891111	True	NM_014472,NM_018058	chr10,chr10	+,-	C10orf28,CRTAC1	3269,-99588
chr17:58502156-58503114	chr17	+	58502232	58503036	True	NM_181707,NM_032582	chr17,chr17	+,-	C17orf64,USP32	-2419,-32646
chr5:159799987-159800615	chr5	+	159800059	159800617	True	NM_031908,NM_004219	chr5,chr5	-,+	C1QTNF2,PTTG1	-2411,48247
chr11:62625532-62625908	chr11	+	62625576	62625835	True	NR_003098,NR_002559,NR_002561,NR_002563,NR_002562,NM_001012662,NR_002560,NM_001012664,NR_002565,NR_002564,NM_002394,NR_000008	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,-,+,-,+,-,-,+,-	SNHG1,SNORD29,SNORD30,SNORD27,SNORD28,SLC3A2,SNORD31,SLC3A2,SNORD25,SNORD26,SLC3A2,SNORD22	-2216,-4136,-4372,-3021,-3409,-2155,-4711,-2155,-2473,-2738,-2155,-5069
chr15:99793619-99794137	chr15	+	99793658	99794107	True	NM_001040658,NM_001040659,NM_001040656,NM_001040657,NM_001040655,NM_144598,NM_022905,NM_001040660	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,-,-,-,+,-,-	TTC23,TTC23,TTC23,TTC23,TTC23,LRRC28,TTC23,TTC23	-3843,-3843,-3843,-3843,-3843,-2057,-3843,-3843
chr12:52308034-52308316	chr12	+	52308062	52308364	True	NM_001077401,NM_000020,NM_001013690	chr12,chr12,chr12	+,+,-	ACVRL1,ACVRL1,FIGNL2	-2000,-6911,-82361
chr14:50357635-50358641	chr14	+	50358170	50358516	True	NM_004713,NM_001663	chr14,chr14	-,+	NEMF,ARF6	-38631,1219
chr17:3572782-3573180	chr17	+	3572798	3573120	True	NM_001204698,NM_001014764,NM_014604,NM_031298	chr17,chr17,chr17,chr17	-,+,-,+	TAX1BP3,TMEM93,TAX1BP3,TMEM93	-825,-759,-825,-759
chr9:136499785-136501524	chr9	+	136499807	136501335	True	NM_000787,NM_001080515	chr9,chr9	+,-	DBH,FAM163B	149,-54439
chr18:49865443-49866492	chr18	+	49865474	49866508	True	NM_005215,NM_016626	chr18,chr18	+,-	DCC,MEX3C	33,-1141423
chr1:153949357-153949587	chr1	+	153949402	153949462	True	NM_130898,NM_014437,NM_002870,NM_006694	chr1,chr1,chr1,chr1	+,-,-,-	CREB3L4,SLC39A1,RAB13,JTB	-9056,-9214,9394,1039
chr16:77221784-77223653	chr16	+	77222049	77223129	True	NM_014940,NM_199355	chr16,chr16	+,-	MON1B,ADAMTS18	1706,245932
chr8:101156465-101156879	chr8	+	101156585	101156794	True	NM_001029860,NR_036491,NM_005034	chr8,chr8,chr8	-,-,+	FBXO43,FBXO43,POLR2K	1366,1366,6044
chr11:3013560-3013789	chr11	+	3013601	3013755	True	NM_005969,NM_002555	chr11,chr11	-,+	NAP1L4,SLC22A18	6,-90140
chr21:32931768-32932295	chr21	+	32931782	32932337	True	NM_000454,NM_003253	chr21,chr21	+,-	SOD1,TIAM1	99597,-492
chr12:53815032-53815722	chr12	+	53815126	53815729	True	NM_001193511,NM_020547,NM_001164691,NM_001164690	chr12,chr12,chr12,chr12	-,+,+,+	MAP3K12,AMHR2,AMHR2,AMHR2	77772,1909,1909,1909
chr11:130786445-130786694	chr11	+	130786556	130786710	True	NM_001048209,NM_014758	chr11,chr11	+,-	NTM,SNX19	453660,-174
chr19:6740155-6740414	chr19	+	6740199	6740259	True	NM_004240,NM_001080452	chr19,chr19	+,-	TRIP10,GPR108	-543,-2566
chr4:2966040-2967259	chr4	+	2966253	2967277	True	NM_003703,NM_182982,NM_001004056,NM_001004057	chr4,chr4,chr4,chr4	-,+,+,+	NOP14,GRK4,GRK4,GRK4	-1135,-961,-961,-961
chr13:45993919-45995368	chr13	+	45994286	45995196	True	NM_001204476,NM_001010875	chr13,chr13	+,-	COG3,SLC25A30	43833,-1770
chr1:6675367-6675621	chr1	+	6675479	6675574	True	NM_014851,NM_138350,NM_001195752,NM_153812,NM_001195753	chr1,chr1,chr1,chr1,chr1	-,+,+,+,+	KLHL21,THAP3,THAP3,PHF13,THAP3	-12550,9635,9635,-1777,9350
chr5:80599311-80600003	chr5	+	80599454	80600032	True	NM_032280,NR_034122,NR_034123,NR_034121,NM_001131035,NM_001131036	chr5,chr5,chr5,chr5,chr5,chr5	+,-,-,-,+,+	ZCCHC9,LOC100131067,LOC100131067,LOC100131067,ZCCHC9,ZCCHC9	-2116,-2066,-2066,-2066,-2116,-2116
chr3:9831511-9832973	chr3	+	9831578	9832922	True	NM_001024959,NM_133480,NM_001024960,NM_006354,NM_005718,NM_001198793,NM_001198780	chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,-,+,-,+,+,+	ARPC4,TADA3,ARPC4,TADA3,ARPC4,ARPC4-TTLL3,ARPC4	1256,1548,1256,1548,1309,1309,1878
chr5:74167158-74167962	chr5	+	74167478	74167806	True	NM_015566,NM_014886	chr5,chr5	-,+	FAM169A,NSA2	-4863,-104436
chr5:6341534-6342777	chr5	+	6341550	6342810	True	NM_001145161,NR_028351	chr5,chr5	+,-	UBE2QL1,FLJ33360	105925,-4145
chr8:7852597-7852925	chr8	+	7852747	7852965	True	NR_027424,NR_003668	chr8,chr8	+,-	FAM66E,DEFB109P1B	-40263,2128
chr8:7852597-7852925	chr8	-	7172445	7172663	False	NR_027000,NR_003668	chr8,chr8	-,+	LOC349196,DEFB109P1B	-28565,-2128
chr5:72676743-72677217	chr5	+	72676806	72677176	True	NM_004472,NM_001037637	chr5,chr5	-,+	FOXD1,BTF3	67226,117073
chr10:28288412-28288667	chr10	+	28288411	28288607	True	NM_021252,NM_018076	chr10,chr10	+,-	RAB18,ARMC4	-495213,-434
chr10:28288412-28288667	chr10	-	27547259	27547313	False	NR_003525,NM_032844	chr10,chr10	-,+	LOC387646,MASTL	-6024,-103557
chr10:123730944-123732283	chr10	+	123731150	123732332	True	NM_206861,NM_017615,NM_001167865	chr10,chr10,chr10	+,-,-	TACC2,NSMCE4A,NSMCE4A	16356,2461,2461
chr1:55017544-55018453	chr1	+	55017589	55018117	True	NM_015547,NM_147161,NM_176782	chr1,chr1,chr1	+,+,-	ACOT11,ACOT11,FAM151A	-3840,-3840,71133
chr1:168196918-168198548	chr1	+	168196919	168198379	True	NR_026844,NM_199344	chr1,chr1	-,+	ANKRD36BP1,SFT2D2	18346,-1715
chr17:62780213-62780449	chr17	+	62780234	62780372	True	NR_026899,NM_138363,NR_027487	chr17,chr17,chr17	-,+,-	LOC146880,CCDC45,LOC146880	-2117,-277127,-2612
chr7:56031828-56032129	chr7	+	56031970	56032126	True	NM_001202469,NM_001483,NM_004577	chr7,chr7,chr7	+,+,-	GBAS,GBAS,PSPH	143,143,87192
chrX:16802374-16802610	chrX	+	16802482	16802549	True	NM_019857,NM_001168683,NM_018360	chrX,chrX,chrX	-,+,+	CTPS2,TXLNG,TXLNG	-71423,2005,2005
chr10:49605931-49607580	chr10	+	49606484	49607578	True	NM_139046,NM_139047,NM_002750,NM_001018071,NM_139049	chr10,chr10,chr10,chr10,chr10	+,+,+,-,+	MAPK8,MAPK8,MAPK8,FRMPD2,MAPK8	2108,2108,2108,-123543,2108
chr2:236401087-236401567	chr2	+	236401104	236401602	True	NM_014914,NM_001037131,NM_001485	chr2,chr2,chr2	+,+,-	AGAP1,AGAP1,GBX2	1133,1133,675100
chr18:24220206-24221971	chr18	+	24220656	24222016	True	NM_198991,NR_026908	chr18,chr18	-,+	KCTD1,C18orf16	-348,223255
chr19:985463-985892	chr19	+	985571	985941	True	NM_024100,NM_001033026	chr19,chr19	+,-	WDR18,C19orf6	-1294,35250
chr9:113018377-113018659	chr9	+	113018405	113018565	True	NM_001136562,NM_003329	chr9,chr9	+,-	AKAP2,TXN	-130675,263
chr10:23393170-23393998	chr10	+	23393172	23393978	True	NM_012228,NM_153714	chr10,chr10	+,-	MSRB2,C10orf67	-8796,239844
chr22:38984546-38985971	chr22	+	38985116	38985722	True	NM_001002880,NM_007068	chr22,chr22	+,-	CBY1,DMC1	66935,-18927
chr2:113378290-113379705	chr2	+	113378666	113379703	True	NR_033871,NM_005415	chr2,chr2	-,+	FLJ42351,SLC20A1	22104,23730
chr11:57090224-57091613	chr11	+	57090318	57091308	True	NM_002559,NM_033396	chr11,chr11	+,-	P2RX3,TNKS1BP1	14640,1161
chrX:69355480-69356715	chrX	+	69355541	69356513	True	NM_001002254,NM_001551	chrX,chrX	-,+	AWAT2,IGBP1	-85753,-2281
chr5:140718987-140719291	chr5	+	140718991	140719331	True	NM_031993,NM_005642,NM_032009,NM_032011,NM_018915,NM_018916,NM_018912	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,-,+,+,+,+,+	PCDHGA1,TAF7,PCDHGA2,PCDHGA3,PCDHGA2,PCDHGA3,PCDHGA1	-8790,-18640,-688,4269,-688,4269,-8790
chr20:30192228-30192504	chr20	+	30192347	30192519	True	NM_181353,NR_036161,NM_001191,NM_002165	chr20,chr20,chr20,chr20	+,+,-,+	ID1,MIR3193,BCL2L1,ID1	572,2469,118187,572
chr1:7845394-7845655	chr1	+	7845406	7845690	True	NM_006786,NM_016831	chr1,chr1	-,+	UTS2,PER3	67464,-694
chr3:53902874-53903230	chr3	+	53902881	53903045	True	NM_022899,NM_018725	chr3,chr3	-,+	ACTR8,IL17RB	13234,-22362
chr17:77071802-77073021	chr17	+	77071827	77072861	True	NM_138793,NM_001042573	chr17,chr17	-,+	CANT1,ENGASE	-65928,-860
chr12:124116669-124116922	chr12	+	124116844	124116932	True	NM_001414,NM_001516	chr12,chr12	-,+	EIF2B1,GTF2H3	1441,1448
chr3:149197929-149198683	chr3	+	149197998	149198505	True	NM_004617,NM_014220	chr3,chr3	+,-	TM4SF4,TM4SF1	-5681,-102430
chr9:112552045-112552903	chr9	+	112552071	112552897	True	NM_053016,NM_007203,NM_002829,NM_147150	chr9,chr9,chr9,chr9	+,+,-,+	PALM2,PALM2-AKAP2,PTPN3,PALM2-AKAP2	-9547,-9547,-291478,-9547
chr22:22222895-22223891	chr22	+	22222987	22223628	True	NM_148176,NM_002745,NM_138957	chr22,chr22,chr22	+,-,-	PPIL2,MAPK1,MAPK1	-202766,-1017,-1017
chr16:18994021-18995077	chr16	+	18994038	18994837	True	NM_015092,NM_024847,NM_001160364	chr16,chr16,chr16	-,+,+	SMG1,TMC7,TMC7	-56312,418,771
chr11:27491028-27492899	chr11	+	27491287	27492785	True	NM_018490,NR_002832	chr11,chr11	-,+	LGR4,BDNF-AS1	1599,35613
chr7:139027723-139028535	chr7	+	139027727	139028131	True	NR_033999,NM_197964	chr7,chr7	-,+	LOC100129148,C7orf55	84192,-1883
chr22:51002457-51002761	chr22	+	51002461	51002547	True	NM_001123225,NM_138433	chr22,chr22	-,+	C22orf41,KLHDC7B	-1133,-16050
chr2:101177264-101177899	chr2	+	101177739	101177911	True	NM_004854,NM_024065	chr2,chr2	-,+	CHST10,PDCL3	-143609,1506
chr22:41841663-41842084	chr22	+	41841713	41842089	True	NM_001098,NM_016272	chr22,chr22	+,-	ACO2,TOB2	23039,988
chr3:35681297-35681515	chr3	+	35681390	35681484	True	NM_033403,NM_016300	chr3,chr3	-,+	DCLK3,ARPP21	1099918,2364
chr1:2036400-2036651	chr1	+	2036457	2036659	True	NR_024445,NM_001033582	chr1,chr1	-,+	LOC100128003,PRKCZ	88415,-353
chr19:12662961-12663485	chr19	+	12663289	12663536	True	NM_153358,NM_144976	chr19,chr19	+,-	ZNF791,ZNF564	58195,-933
chr12:7016966-7017480	chr12	+	7016995	7017427	True	NM_032641,NM_201650,NM_006992,NM_001135217,NM_001975	chr12,chr12,chr12,chr12,chr12	-,+,+,+,+	SPSB2,LRRC23,LRRC23,LRRC23,ENO2	-34474,-3149,-3149,-3149,6186
chr11:36299917-36300602	chr11	+	36299997	36300593	True	NM_001101653,NM_001160167	chr11,chr11	-,+	COMMD9,PRR5L	10456,17131
chr8:79578168-79578528	chr8	+	79578253	79578509	True	NM_016010,NM_000880	chr8,chr8	+,-	FAM164A,IL7	-22,139299
chr19:53101638-53101882	chr19	+	53101722	53101854	True	NR_023311,NM_001105549	chr19,chr19	+,-	ZNF137P,ZNF83	-1836,39840
chr18:61449553-61450092	chr18	+	61449568	61450076	True	NM_003784,NM_006919	chr18,chr18	+,-	SERPINB7,SERPINB3	-7007,-120371
chr16:65248901-65250413	chr16	+	65248902	65250332	True	NM_001795,NM_001797	chr16,chr16	+,-	CDH5,CDH11	1150192,-92983
chr18:44237899-44238222	chr18	+	44238038	44238139	True	NM_144612,NM_031303	chr18,chr18	-,+	LOXHD1,KATNAL2	-1042,288647
chr10:45404939-45405298	chr10	+	45404966	45405281	True	NR_033842,NM_001123376	chr10,chr10	-,+	LOC220980,TMEM72	49907,1482
chr11:19213843-19214294	chr11	+	19213886	19214322	True	NM_001127656,NM_003476,NM_019028	chr11,chr11,chr11	-,-,+	CSRP3,CSRP3,ZDHHC13	9258,9317,-75245
chr11:113852088-113853724	chr11	+	113852136	113853724	True	NM_000869,NM_213621,NM_001161772,NM_020886	chr11,chr11,chr11,chr11	+,+,+,-	HTR3A,HTR3A,HTR3A,USP28	-6390,-6390,-3965,-105880
chr10:75447525-75448953	chr10	+	75448647	75448761	True	NM_001144000,NM_004922	chr10,chr10	-,+	AGAP5,SEC24C	8843,55369
chr14:97401356-97402572	chr14	+	97401399	97402566	True	NM_003384,NM_018036	chr14,chr14	+,-	VRK1,ATG2B	-137766,-571721
chr8:103669023-103669628	chr8	+	103669138	103669463	True	NM_024410,NM_005655,NM_001032282	chr8,chr8,chr8	+,-,-	ODF1,KLF10,KLF10	-105341,-1155,-2970
chr4:156875156-156875370	chr4	+	156875213	156875275	True	NM_005651,NM_001334	chr4,chr4	+,-	TDO2,CTSO	-50417,-165
chr12:53227433-53227814	chr12	+	53227437	53227601	True	NM_199187,NM_175834	chr12,chr12	+,-	KRT18,KRT79	115053,526
chr17:43027719-43028289	chr17	+	43028048	43028136	True	NM_001080443,NM_213607	chr17,chr17	-,+	KIF18B,CCDC103	-2966,-50951
chr6:127828017-127828842	chr6	+	127828017	127828663	True	NM_001010905,NM_001012279	chr6,chr6	+,-	C6orf58,C6orf174	69655,11899
chr11:36417732-36419165	chr11	+	36417832	36418960	True	NM_001160169,NM_014186	chr11,chr11	+,-	PRR5L,COMMD9	3586,-106833
chr8:39187076-39187698	chr8	+	39187226	39187647	True	NR_001448,NR_001569	chr8,chr8	+,-	ADAM5P,ADAM3A	-15096,192874
chr1:17535397-17535744	chr1	+	17535456	17535744	True	NM_007365,NM_013358	chr1,chr1	-,+	PADI2,PADI1	-89508,-3886
chr9:130679669-130679973	chr9	+	130679713	130679914	True	NM_175039,NM_173492,NM_001018078,NM_175040	chr9,chr9,chr9,chr9	-,-,+,-	ST6GALNAC4,PIP5KL1,FPGS,ST6GALNAC4	-408,9913,-114256,-408
chr11:118081998-118083009	chr11	+	118082324	118083006	True	NM_153206,NM_000733	chr11,chr11	-,+	AMICA1,CD3E	1118,92288
chrX:9432249-9432475	chrX	+	9432262	9432474	True	NM_001139466,NM_001139467,NM_005647,NM_001139468,NM_000273	chrX,chrX,chrX,chrX,chrX	+,+,+,+,-	TBL1X,TBL1X,TBL1X,TBL1X,GPR143	-978,-978,726,-978,301581
chr9:131708254-131708514	chr9	+	131708352	131708552	True	NM_015354,NM_014908	chr9,chr9	+,-	NUP188,DOLK	1424,1510
chr7:156683808-156685039	chr7	+	156684045	156684977	True	NM_022458,NM_138400	chr7,chr7	-,+	LMBR1,NOM1	975,57439
chr1:155242435-155243055	chr1	+	155242438	155242824	True	NM_003993,NM_020897	chr1,chr1	-,+	CLK2,HCN3	507,4549
chr5:148725794-148726391	chr5	+	148725803	148726207	True	NM_152407,NM_014443	chr5,chr5	+,-	GRPEL2,IL17B	-883,32681
chr18:499803-500043	chr18	+	499894	500036	True	NM_130386,NM_004066	chr18,chr18	-,+	COLEC12,CETN1	743,80332
chr9:17156088-17157645	chr9	+	17156157	17157669	True	NM_017637,NM_017738	chr9,chr9	-,+	BNC2,CNTLN	-285371,-21170
chr19:40501057-40502372	chr19	+	40501107	40502411	True	NM_001005851,NM_003890,NM_178544	chr19,chr19,chr19	-,-,+	ZNF780B,FCGBP,ZNF546	59754,-60574,531
chr8:11204645-11204987	chr8	+	11204726	11204940	True	NR_001578,NM_053279	chr8,chr8	+,-	TDH,FAM167A	-7631,119386
chr7:2350023-2350972	chr7	+	2350443	2350986	True	NM_001037283,NM_013321	chr7,chr7	+,-	EIF3B,SNX8	43487,3164
chr17:62487029-62487599	chr17	+	62487036	62487226	True	NM_138363,NM_007215	chr17,chr17	+,-	CCDC45,POLG2	15931,6014
chr1:54870104-54870654	chr1	+	54870222	54870619	True	NM_018070,NM_145716,NM_147161,NM_001009955	chr1,chr1,chr1,chr1	-,-,+,-	SSBP3,SSBP3,ACOT11,SSBP3	1411,1411,143187,1524
chr7:123578973-123579230	chr7	+	123579061	123579141	True	NM_001174046,NM_001136002	chr7,chr7	+,-	SPAM1,TMEM229A	-13218,94446
chr7:111202628-111203135	chr7	+	111202667	111203050	True	NM_032549,NM_018334	chr7,chr7	-,+	IMMP2L,LRRN3	-320,-471656
chr11:67725222-67726103	chr11	+	67725537	67726117	True	NM_030930,NM_001161473	chr11,chr11	-,+	UNC93B1,ALDH3B1	45526,49930
chr5:148204808-148205434	chr5	+	148204999	148205447	True	NM_000024,NM_000870	chr5,chr5	+,-	ADRB2,HTR4	708,-171260
chr17:72197734-72198309	chr17	+	72197766	72198100	True	NM_000999,NR_026914,NM_001035258	chr17,chr17,chr17	+,-,+	RPL38,MGC16275,RPL38	1694,11410,1694
chr17:46622097-46622520	chr17	+	46622137	46622544	True	NM_002145,NR_033201	chr17,chr17	-,+	HOXB2,LOC404266	-67,45278
chr1:148931490-148931704	chr1	+	148931490	148931676	True	NR_027355,NR_027354,NM_001024599,NR_027356	chr1,chr1,chr1,chr1	+,+,-,+	LOC645166,LOC645166,HIST2H2BF,LOC645166	-3255,-1136,467603,-3255
chr10:28035378-28035862	chr10	+	28035614	28035674	True	NM_021252,NM_173576	chr10,chr10	+,-	RAB18,MKX	-242416,-836
chr8:36656569-36657143	chr8	+	36656572	36657060	True	NM_001031836,NR_003671	chr8,chr8	+,-	KCNU1,LOC728024	-14781,948559
chr9:99616757-99617052	chr9	+	99616871	99617072	True	NR_028350,NM_001001662	chr9,chr9	+,-	LOC441454,ZNF782	54284,-482
chr16:71919052-71920666	chr16	+	71919337	71920672	True	NM_014761,NM_017530,NM_001201554,NM_001201556,NM_001201552,NM_001201553	chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,-,-,-	KIAA0174,ZNF821,ZNF821,ZNF821,ZNF821,ZNF821	8773,-1893,-1244,-1244,-1244,-1893
chr19:19887172-19887599	chr19	+	19887176	19887618	True	NM_021047,NR_026956	chr19,chr19	+,-	ZNF253,LOC284440	89095,-34
chr11:104031547-104031757	chr11	+	104031567	104031752	True	NM_033135,NM_025208,NM_001001711	chr11,chr11,chr11	-,-,+	PDGFD,PDGFD,DDI1	3326,3326,-124323
chr1:6294406-6294654	chr1	+	6294450	6294554	True	NM_012405,NM_001024598	chr1,chr1	-,+	ICMT,HES3	1540,9697
chr6:26656857-26657196	chr6	+	26656936	26657205	True	NM_013375,NM_024639	chr6,chr6	+,-	ABT1,ZNF322A	-59815,2808
chr10:103817102-103817772	chr10	+	103817672	103817808	True	NM_024747,NM_024541	chr10,chr10	+,-	HPS6,C10orf76	7315,-1740
chr19:55874261-55874498	chr19	+	55874265	55874467	True	NM_000641,NM_144613,NM_001145402,NM_139172	chr19,chr19,chr19,chr19	-,-,-,+	IL11,COX6B2,FAM71E2,TMEM190	7397,-8083,203,13736
chr11:18435100-18435505	chr11	+	18435326	18435551	True	NM_017448,NM_181508,NM_002301	chr11,chr11,chr11	+,-,+	LDHC,HPS5,LDHC	-1533,-91605,-1533
chr19:6359659-6360195	chr19	+	6359675	6360205	True	NM_006012,NM_004158	chr19,chr19	+,-	CLPP,PSPN	1257,15705
chr14:54858684-54859249	chr14	+	54858696	54859242	True	NM_005192,NM_005776,NM_001130851	chr14,chr14,chr14	+,-,+	CDKN3,CNIH,CDKN3	4430,48956,4430
chr22:50926454-50927914	chr22	+	50926772	50927868	True	NM_024866,NM_017584,NM_002972	chr22,chr22,chr22	+,+,-	ADM2,MIOX,SBF1	-6811,-1610,-13308
chr1:151138587-151138919	chr1	+	151138598	151138842	True	NM_024575,NM_001204848,NM_013353,NR_037937,NM_001204856,NM_001136543,NM_024041,NM_212551	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,+,+,-,+,-	TNFAIP8L2,TNFAIP8L2-SCNM1,TMOD4,SCNM1,SCNM1,LYSMD1,SCNM1,LYSMD1	-9545,-9545,9755,-152,-152,-174,-152,-228
chr17:61934521-61935271	chr17	+	61934566	61935308	True	NM_001098426,NR_002947	chr17,chr17	-,+	SMARCD2,TCAM1P	-14215,-241
chr21:38638377-38638750	chr21	+	38638553	38638785	True	NM_006052,NR_026719	chr21,chr21	-,+	DSCR3,DSCR9	1098,-57650
chr5:128301295-128301694	chr5	+	128301304	128301680	True	NM_014031,NM_001999,NM_001017372	chr5,chr5,chr5	+,-,+	SLC27A6,FBN2,SLC27A6	-145,-427569,-142
chr7:100730469-100730856	chr7	+	100730526	100730856	True	NM_003378,NM_030961	chr7,chr7	-,+	VGF,TRIM56	78046,-1791
chr18:57683826-57684718	chr18	+	57684230	57684714	True	NM_133459,NM_021127	chr18,chr18	-,+	CCBE1,PMAIP1	-319586,-117089
chr12:7060915-7061381	chr12	+	7060923	7061343	True	NM_138425,NM_080548,NM_080549,NR_003010,NM_002831	chr12,chr12,chr12,chr12,chr12	+,+,+,-,+	C12orf57,PTPN6,PTPN6,SCARNA12,PTPN6	-7771,-5234,-540,15476,-540
chr8:62221158-62221509	chr8	+	62221234	62221552	True	NR_034003,NM_173519	chr8,chr8	-,+	LOC100130298,CLVS1	-340927,-20773
chr1:145728102-145729812	chr1	+	145728155	145729667	True	NM_002614,NM_001201326,NM_001201325,NM_007053	chr1,chr1,chr1,chr1	+,+,+,-	PDZK1,PDZK1,PDZK1,CD160	-544,-544,-544,-12590
chr11:58174942-58175687	chr11	+	58175139	58175498	True	NM_001197051,NM_001005469	chr11,chr11	+,-	ZFP91,OR5B3	171088,-4257
chr12:104351848-104353210	chr12	+	104352179	104353181	True	NM_003211,NM_001135570	chr12,chr12	+,-	TDG,C12orf73	6411,-1186
chr6:21667582-21668041	chr6	+	21667814	21668013	True	NR_034143,NR_015410	chr6,chr6	-,+	LOC729177,FLJ22536	479466,-1190
chr19:55767119-55768358	chr19	+	55767337	55768403	True	NM_032430,NM_014931	chr19,chr19	+,-	BRSK1,PPP6R1	27130,1685
chr12:120106329-120106776	chr12	+	120106349	120106748	True	NR_031589,NM_006253	chr12,chr12	-,+	MIR1178,PRKAB1	44836,-639
chrX:150150763-150151324	chrX	+	150150771	150151251	True	NM_005342,NM_134446	chrX,chrX	+,-	HMGB3,CD99L2	511,-83482
chr16:21515327-21515740	chr16	+	21515464	21515526	True	NM_001077180,NR_027155	chr16,chr16	+,-	METTL9,LOC100271836	95329,-1862
chr15:59494580-59495565	chr15	+	59494712	59495566	True	NM_033195,NR_031750	chr15,chr15	+,-	LDHAL6B,MIR2116	3475,-31251
chr9:116066096-116066359	chr9	+	116066096	116066164	True	NM_145051,NM_004697	chr9,chr9	-,+	RNF183,PRPF4	-4776,-28173
chr1:169764320-169765050	chr1	+	169764345	169765068	True	NM_018186,NM_033418	chr1,chr1	+,-	C1orf112,METTL18	-76,-314
chr10:125750928-125751135	chr10	+	125751092	125751168	True	NM_198148,NM_153442	chr10,chr10	-,+	CPXM2,GPR26	-99592,-325273
chr21:35897240-35897610	chr21	+	35897248	35897610	True	NM_053277,NM_203418	chr21,chr21	+,-	CLIC6,RCAN1	144077,1701
chr13:95363740-95363956	chr13	+	95363739	95364005	True	NM_180989,NM_007084	chr13,chr13	+,-	GPR180,SOX21	-109686,434
chr5:140018508-140019177	chr5	+	140018620	140018886	True	NM_000591,NM_001185012,NR_037428,NM_006083,NM_001174104,NM_001174105,NM_018502,NM_002488,NM_001040021,NR_033697	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,-,+,+,-,-,+,-,-,-	CD14,NDUFA2,MIR3655,IK,CD14,CD14,TMCO6,NDUFA2,CD14,NDUFA2	-5585,8534,8542,8497,-5334,-5334,125,8534,-5334,8534
chr17:6855323-6855801	chr17	+	6855708	6855844	True	NM_000697,NR_029712	chr17,chr17	+,-	ALOX12,MIR195	43539,65226
chr21:31865481-31866881	chr21	+	31865504	31866683	True	NM_181623,NM_181609,NM_181608,NM_181610,NM_181611	chr21,chr21,chr21,chr21,chr21	+,-,-,-,-	KRTAP15-1,KRTAP19-3,KRTAP19-2,KRTAP19-4,KRTAP19-5	-52910,-1229,-5837,2808,7788
chr3:39093800-39094348	chr3	+	39093888	39094336	True	NM_020839,NM_031899	chr3,chr3	+,-	WDR48,GORASP1	-432,54844
chr2:233415704-233416081	chr2	+	233415774	233416074	True	NM_004846,NM_145702	chr2,chr2	+,-	EIF4E2,TIGD1	-468,-548
chr5:10663182-10664083	chr5	+	10663342	10664122	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-98958,97315
chr6:30859695-30859937	chr6_qbl_hap6	+	2152817	2152963	False	NM_013993,NM_001202521,NM_001202522,NM_001202523,NM_013994,NM_001954,NM_205854	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	+,+,+,+,+,+,-	DDR1,DDR1,DDR1,DDR1,DDR1,DDR1,SFTA2	-7554,-3416,-3416,-7124,-3416,-8020,40010
chr6:30859695-30859937	chr6_dbb_hap3	+	2153946	2154092	False	NM_013993,NM_001202521,NM_001202522,NM_001202523,NM_013994,NM_001954,NM_205854	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	+,+,+,+,+,+,-	DDR1,DDR1,DDR1,DDR1,DDR1,DDR1,SFTA2	-7568,-3430,-3430,-7138,-3430,-8034,40020
chr6:30859695-30859937	chr6_mann_hap4	+	2207909	2208055	False	NM_013993,NM_001202521,NM_001202522,NM_001202523,NM_013994,NM_001954,NM_205854	chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4	+,+,+,+,+,+,-	DDR1,DDR1,DDR1,DDR1,DDR1,DDR1,SFTA2	-7548,-3410,-3410,-7118,-3410,-8014,40028
chr6:30859695-30859937	chr6	+	30859828	30859974	True	NM_013993,NM_001202521,NM_001202522,NM_001202523,NM_013994,NM_001954,NM_205854	chr6,chr6,chr6,chr6,chr6,chr6,chr6	+,+,+,+,+,+,-	DDR1,DDR1,DDR1,DDR1,DDR1,DDR1,SFTA2	-7552,-3414,-3414,-7122,-3414,-8018,40028
chr6:30859695-30859937	chr6_cox_hap2	+	2371928	2372074	False	NM_013993,NM_001202521,NM_001202522,NM_001202523,NM_013994,NM_001954,NM_205854	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,+,+,+,+,+,-	DDR1,DDR1,DDR1,DDR1,DDR1,DDR1,SFTA2	-7554,-3416,-3416,-7124,-3416,-8020,39851
chr5:62073121-62074922	chr5	+	62073611	62074955	True	NM_181506,NM_014473	chr5,chr5	+,-	LRRC70,DIMT1L	-199101,-373883
chr22:19843425-19844173	chr22	+	19843521	19844005	True	NM_024627,NM_000754,NM_053004	chr22,chr22,chr22	-,+,-	C22orf29,COMT,GNB1L	-1150,85257,-1059
chr22:42528380-42528594	chr22	+	42528519	42528635	True	NM_001025161,NM_000106,NR_034118	chr22,chr22,chr22	-,-,+	CYP2D6,CYP2D6,LOC100132273	-1636,-1636,-41633
chr16:1727297-1728020	chr16	+	1727491	1727939	True	NM_144570,NM_014714	chr16,chr16	+,-	HN1L,IFT140	338,-65382
chr2:24404982-24406968	chr2	+	24405064	24406724	True	NM_001040710,NM_199346	chr2,chr2	+,-	C2orf84,PFN4	-7152,-58913
chr5:140021362-140022314	chr5	+	140021402	140022338	True	NM_001040021,NM_001174104,NM_001185012,NM_006083,NR_037428,NM_001174105,NM_018502,NM_002488,NM_000591,NR_033697	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,+,+,-,+,-,-,-	CD14,CD14,NDUFA2,IK,MIR3655,CD14,TMCO6,NDUFA2,CD14,NDUFA2	-8116,-8116,5082,5045,5090,-8116,-2441,5082,-8367,5082
chr8:1775633-1777268	chr8	+	1775836	1777197	True	NM_014629,NR_033895	chr8,chr8	+,-	ARHGEF10,LOC286083	-3738,-525009
chr4:68792332-68793853	chr4	+	68792772	68793766	True	NR_015439,NM_001114387	chr4,chr4	+,-	LOC550112,TMPRSS11A	-225827,35520
chr17:55058071-55058895	chr17	+	55058370	55058848	True	NM_021626,NM_004645	chr17,chr17	+,-	SCPEP1,COIL	-2953,-19959
chr19:46711224-46711527	chr19	+	46711367	46711519	True	NR_027003,NM_207393	chr19,chr19	+,-	DKFZp434J0226,IGFL3	1979,-83436
chr10:11049389-11049643	chr10	+	11049534	11049660	True	NR_024411,NM_001025077	chr10,chr10	-,+	LOC254312,CELF2	-55408,-2326
chr11:124091282-124092143	chr11	+	124091337	124092049	True	NM_001002917,NM_001007249	chr11,chr11	-,+	OR8D1,OR8G2	88673,3348
chr17:60004908-60005122	chr17	+	60004914	60005130	True	NR_026641,NM_020748,NM_001144933	chr17,chr17,chr17	-,-,+	INTS2,INTS2,EFCAB3	297,297,442448
chr2:24398168-24398412	chr2	+	24398187	24398451	True	NM_001040710,NM_199346	chr2,chr2	+,-	C2orf84,PFN4	-266,-52036
chr9:2289517-2290924	chr9	+	2289606	2290969	True	NM_139045,NR_015375	chr9,chr9	+,-	SMARCA2,FLJ35024	-274316,331455
chr4:38804698-38805966	chr4	+	38804744	38805992	True	NM_003263,NM_138389	chr4,chr4	-,+	TLR1,FAM114A1	470,63361
chr11:105948023-105948360	chr11	+	105948089	105948253	True	NM_198439,NM_015423,NM_152433	chr11,chr11,chr11	-,+,-	KBTBD3,AASDHPPT,KBTBD3	262,38,262
chr5:175816419-175817105	chr5	+	175816796	175816876	True	NM_138820,NM_016391	chr5,chr5	+,-	HIGD2A,NOP16	-1063,-1256
chr1:158153429-158153807	chr1	+	158153438	158153834	True	NR_033946,NM_001766	chr1,chr1	-,+	LOC646268,CD1D	-43008,-3752
chr11:66609195-66609523	chr11	+	66609285	66609393	True	NM_001032279,NM_005133,NM_022172	chr11,chr11,chr11	+,+,-	RCE1,RCE1,PC	1489,1489,65997
chr3:142318464-142318688	chr3	+	142318464	142318543	True	NM_001184,NM_001145319	chr3,chr3	-,+	ATR,PLS1	-20796,-3286
chr17:42345182-42346474	chr17	+	42345464	42346508	True	NM_001144826,NM_000342	chr17,chr17	+,-	RUNDC3A,SLC4A1	39418,38
chr10:44099716-44101089	chr10	+	44100100	44100890	True	NM_001099284,NM_145312	chr10,chr10	-,+	ZNF239,ZNF485	-30034,964
chr6:2976847-2977319	chr6	+	2976883	2977273	True	NR_026855,NM_001195291,NM_004568	chr6,chr6,chr6	+,-,-	DKFZP686I15217,SERPINB6,SERPINB6	10927,-4484,-4484
chr22:35875172-35875854	chr22	+	35875384	35875891	True	NM_005368,NM_014310	chr22,chr22	-,+	MB,RASD2	137547,61460
chr17:43222578-43222914	chr17	+	43222582	43222786	True	NM_024722,NM_001135707,NM_001135706,NM_001135705,NM_133373,NM_006460	chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,-,+	ACBD4,ACBD4,ACBD4,ACBD4,PLCD3,HEXIM1	-9619,-9619,-9619,-9619,-12691,1897
chr19:42076921-42078821	chr19	+	42076966	42078632	True	NM_001098506,NM_033543,NM_001817	chr19,chr19,chr19	+,+,-	CEACAM21,CEACAM21,CEACAM4	3898,3898,54860
chr20:10015966-10017215	chr20	+	10016097	10017195	True	NM_198798,NM_177990,NM_022096	chr20,chr20,chr20	+,-,+	ANKRD5,PAK7,ANKRD5	-451,-196410,-451
chr6:111305763-111306710	chr6	+	111306192	111306744	True	NM_032194,NR_002932	chr6,chr6	+,-	RPF2,GSTM2P1	-2954,62063
chr8:17655178-17655932	chr8	+	17655252	17655810	True	NM_006197,NM_001001925,NM_001001924	chr8,chr8,chr8	+,-,-	PCM1,MTUS1,MTUS1	124555,2678,2678
chr6:34726251-34728144	chr6	+	34726487	34728202	True	NM_024294,NR_029472,NM_003093	chr6,chr6,chr6	-,+,+	C6orf106,SNRPC,SNRPC	-61862,-1677,-1677
chr17:79829641-79830126	chr17	+	79829670	79830098	True	NM_001185077,NM_001002244,NM_004309,NM_001185078	chr17,chr17,chr17,chr17	-,+,-,-	ARHGDIA,ANAPC11,ARHGDIA,ARHGDIA	-880,19500,-388,-388
chr17:66956376-66957613	chr17	+	66956627	66957593	True	NM_007168,NM_212472	chr17,chr17	-,+	ABCA8,PRKAR1A	-5094,-448142
chr11:65556811-65557409	chr11	+	65556819	65557315	True	NM_138368,NM_004561	chr11,chr11	-,+	DKFZp761E198,OVOL1	-8997,-2341
chr11:59383285-59383522	chr11	+	59383285	59383571	True	NM_001004711,NM_002556	chr11,chr11	+,-	OR4D9,OSBP	-100950,96
chr17:18220608-18221082	chr17	+	18220612	18221058	True	NM_004618,NM_144775	chr17,chr17	-,+	TOP3A,SMCR8	-2291,-2069
chr13:51796125-51796408	chr13	+	51796184	51796320	True	NR_003923,NM_145019	chr13,chr13	-,+	GUCY1B2,FAM124A	-155891,186
chr22:35871385-35871764	chr22	+	35871467	35871695	True	NM_005368,NM_014310	chr22,chr22	-,+	MB,RASD2	141739,65656
chr18:3252465-3253567	chr18	+	3252573	3253605	True	NM_019856,NM_006471,NM_001144945,NM_033546,NM_001144944	chr18,chr18,chr18,chr18,chr18	-,+,+,+,+	MYOM1,MYL12A,MYL12B,MYL12B,MYL12B	-32467,-5108,9111,8505,9005
chr8:80942561-80943974	chr8	+	80942678	80943814	True	NM_007029,NM_014018	chr8,chr8	+,-	STMN2,MRPS28	-419681,-172
chr12:5299560-5300989	chr12	+	5299914	5300914	True	NM_006422,NM_002234	chr12,chr12	-,+	AKAP3,KCNA5	-545571,-146892
chr6:111579429-111580251	chr6	+	111579505	111580201	True	NM_153369,NR_002932	chr6,chr6	+,-	KIAA1919,GSTM2P1	280,-210748
chr15:29858087-29859351	chr15	+	29858252	29859326	True	NM_015307,NR_026859	chr15,chr15	-,+	FAM189A1,FAM7A3	3651,536608
chr19:34971625-34972005	chr19	+	34971705	34971847	True	NR_027620,NM_001080436	chr19,chr19	-,+	LOC643719,WTIP	96799,1032
chr11:85419128-85420174	chr11	+	85419458	85419808	True	NM_032379,NM_032273	chr11,chr11	-,+	SYTL2,TMEM126A	6044,-60554
chr11:111471954-111472722	chr11	+	111472033	111472761	True	NM_015191,NM_017589	chr11,chr11	+,-	SIK2,BTG4	408,-88969
chr3:51707962-51708393	chr3	+	51708039	51708413	True	NM_015926,NM_001129884,NR_024012,NM_001143833	chr3,chr3,chr3,chr3	+,+,+,-	TEX264,TEX264,TEX264,IQCF6	-2870,-2870,-2870,104840
chr6:131586365-131587208	chr6	+	131586572	131587186	True	NM_001431,NM_138633	chr6,chr6	-,+	EPB41L2,AKAP7	-202110,-15119
chr1:157790358-157792084	chr1	+	157790358	157791810	True	NM_001159397,NM_018240,NM_052938,NM_001159398	chr1,chr1,chr1,chr1	-,+,-,-	FCRL1,KIRREL,FCRL1,FCRL1	-418,171252,-418,-418
chr15:90222553-90223140	chr15	+	90222735	90223179	True	NM_001145311,NM_020212,NM_002666	chr15,chr15,chr15	-,+,-	PLIN1,WDR93,PLIN1	-87,10848,-87
chr9:135905219-135905505	chr9	+	135905399	135905475	True	NM_001122823,NM_001162427,NM_012087	chr9,chr9,chr9	+,-,+	GTF3C5,TSC1,GTF3C5	586,-85379,586
chr1:28242444-28242894	chr1	+	28242609	28242691	True	NM_001009568,NM_002946	chr1,chr1	+,-	SMPDL3B,RPA2	18812,-1373
chr12:103299324-103299538	chr12	+	103299324	103299534	True	NM_000277,NM_004316	chr12,chr12	-,+	PAH,ASCL1	11899,51917
chr13:24735614-24736919	chr13	+	24735634	24736799	True	NM_153023,NR_031753,NM_001166271,NM_001007537	chr13,chr13,chr13,chr13	+,+,+,-	SPATA13,MIR2276,SPATA13,C1QTNF9B	-824,-68,-824,-264509
chr22:25438186-25438592	chr22	+	25438188	25438411	True	NM_001001663,NM_001145206	chr22,chr22	-,+	TMEM211,KIAA1671	-102874,-14309
chr3:68113271-68113742	chr3	+	68113278	68113784	True	NM_213609,NM_003848	chr3,chr3	+,-	FAM19A1,SUCLG2	-59875,-408240
chr8:30012859-30013406	chr8	+	30012863	30013327	True	NM_006571,NM_001100916	chr8,chr8	+,-	DCTN6,MBOAT4	485,-10663
chr10:85955766-85957321	chr10	+	85955918	85957254	True	NM_033100,NM_001171971,NM_001017924	chr10,chr10,chr10	+,+,-	CDHR1,CDHR1,LRIT2	-1557,-1557,28080
chr8:65674202-65675686	chr8	+	65674239	65675378	True	NM_152414,NM_004820	chr8,chr8	+,-	BHLHE22,CYP7B1	-181495,36024
chr11:9596722-9597481	chr11	+	9596725	9597397	True	NR_036539,NM_003390,NM_001143976	chr11,chr11,chr11	-,+,+	LOC644656,WEE1,WEE1	-114480,-1549,-543
chr11:66084658-66084892	chr11	+	66084832	66084940	True	NM_020404,NM_153266	chr11,chr11	-,+	CD248,TMEM151A	-317,-25510
chr8:87082362-87082856	chr8	+	87082383	87082905	True	NM_152565,NM_033126	chr8,chr8	+,-	ATP6V0D2,PSKH2	28233,-532
chr9:94896614-94896828	chr9	+	94896616	94896816	True	NR_015444,NM_178324,NR_027341	chr9,chr9,chr9	+,-,+	LOC100128076,SPTLC1,C9orf44	-1551,-18926,6932
chr17:62210867-62212654	chr17	+	62211041	62212699	True	NR_004380,NM_001433	chr17,chr17	+,-	SNORD104,ERN1	10738,-3539
chr7:95402457-95404169	chr7	+	95402546	95404048	True	NM_001135556,NM_001135557,NM_002612,NM_004411	chr7,chr7,chr7,chr7	+,+,-,+	DYNC1I1,DYNC1I1,PDK4,DYNC1I1	-779,-779,-176621,-779
chr1:28396964-28397564	chr1	+	28397195	28397424	True	NM_018053,NM_001990	chr1,chr1	+,-	XKR8,EYA3	-110752,17785
chr6:138997165-138997882	chr6	+	138997187	138997781	True	NM_020464,NR_033896	chr6,chr6	-,+	NHSL1,FLJ46906	-103519,15023
chr6:26086449-26087686	chr6	+	26086548	26087562	True	NM_139008,NM_139009,NM_005323,NM_000410,NM_139003,NM_139004,NM_139006,NM_139007,NM_139011,NM_139010	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	+,+,-,+,+,+,+,+,+,+	HFE,HFE,HIST1H1T,HFE,HFE,HFE,HFE,HFE,HFE,HFE	-54,-54,20852,-54,-54,-54,-54,-54,-54,-54
chr15:60689495-60689751	chr15	+	60689497	60689703	True	NM_012182,NM_001002858,NM_004039,NM_001002857,NM_001136015	chr15,chr15,chr15,chr15,chr15	+,-,-,-,-	FOXB1,ANXA2,ANXA2,ANXA2,ANXA2	-393127,532,532,532,532
chr12:32830695-32831598	chr12	+	32830994	32831539	True	NM_001040436,NM_012062,NM_005690,NM_012063	chr12,chr12,chr12,chr12	-,+,+,+	YARS2,DNM1L,DNM1L,DNM1L	77399,597,597,597
chr15:69452552-69452941	chr15	+	69452615	69452820	True	NM_006305,NM_015554	chr15,chr15	-,+	ANP32A,GLCE	-339354,152
chr10:124133566-124133950	chr10	+	124133571	124133949	True	NM_001001974,NM_001010912	chr10,chr10	+,-	PLEKHA1,C10orf120	144,325439
chr5:158635942-158636191	chr5	+	158635984	158636122	True	NM_001199381,NM_001199380,NM_001199383,NM_001199382,NM_145049,NM_144726	chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,+,-	RNF145,RNF145,RNF145,RNF145,UBLCP1,RNF145	-844,989,491,-1328,53966,-1150
chr3:46874978-46875224	chr3	+	46875005	46875223	True	NM_000316,NM_182702	chr3,chr3	+,-	PTH1R,PRSS42	44012,412
chrX:48659198-48659949	chrX	+	48659280	48659986	True	NM_006044,NM_013271	chrX,chrX	+,-	HDAC6,PCSK1N	500,34024
chr11:61010978-61011280	chr11	+	61011129	61011293	True	NM_014224,NM_152718	chr11,chr11	+,-	PGA5,VWCE	-2547,51545
chr11:61010978-61011280	chr11	+	60973588	60973638	False	NM_001079807,NM_017966	chr11,chr11	+,-	PGA3,VPS37C	-2655,-44672
chr11:61010978-61011280	chr11	+	60992303	60992467	False	NM_017966,NM_001079808	chr11,chr11	-,+	VPS37C,PGA4	-63387,-2544
chr9:125031367-125031723	chr9	+	125031465	125031727	True	NR_027126,NM_001173512,NR_027125,NM_033117,NM_138777,NM_199177	chr9,chr9,chr9,chr9,chr9,chr9	-,+,-,-,+,+	RBM18,MRRF,RBM18,RBM18,MRRF,MRRF	-4322,-4647,-4322,-4322,-4647,1415
chr18:74520241-74521010	chr18	+	74520514	74520922	True	NM_007345,NM_001025081	chr18,chr18	+,-	ZNF236,MBP	15193,208183
chr7:142583350-142584787	chr7	+	142583729	142584755	True	NM_004445,NM_018646	chr7,chr7	+,-	EPHB6,TRPV6	-30988,-252
chr1:68913386-68914507	chr1	+	68913599	68914409	True	NM_000329,NM_001924	chr1,chr1	-,+	RPE65,GADD45A	1284,-762790
chr16:50770572-50772435	chr16	+	50771040	50772456	True	NM_001042355,NM_001042412,NM_015247,NM_182854	chr16,chr16,chr16,chr16	+,+,+,-	CYLD,CYLD,CYLD,SNX20	3504,3572,3504,-55776
chr17:19282619-19284292	chr17	+	19282666	19284266	True	NM_001198695,NM_002749,NM_002404,NM_139033,NM_139032,NM_139034	chr17,chr17,chr17,chr17,chr17,chr17	-,+,-,+,+,+	MFAP4,MAPK7,MFAP4,MAPK7,MAPK7,MAPK7	6316,-943,6316,-1683,-1683,-943
chr2:129278218-129278589	chr2	+	129278262	129278560	True	NM_004807,NR_027671	chr2,chr2	-,+	HS6ST1,UGGT1	-202091,-429532
chr17:73586355-73586870	chr17	+	73586369	73586775	True	NR_003587,NM_020753	chr17,chr17	+,-	MYO15B,CASKIN2	-2281,-74742
chr5:21461229-21462549	chr5	+	21461505	21462272	True	NR_027027,NR_027026,NM_004061,NR_027028	chr5,chr5,chr5,chr5	+,+,-,+	GUSBP1,GUSBP1,CDH12,GUSBP1	-1967,-1967,1391509,-1967
chr2:128404043-128404310	chr2	+	128404079	128404359	True	NM_005291,NR_027823,NM_001161416,NM_001161417,NM_001161415	chr2,chr2,chr2,chr2,chr2	+,-,+,+,+	GPR17,LIMS2,GPR17,GPR17,GPR17	-691,1444,-691,-691,-691
chr2:23615983-23616729	chr2	+	23616046	23616641	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	533344,-7809
chr19:48830448-48831154	chr19	+	48830567	48831065	True	NM_144577,NM_001425	chr19,chr19	-,+	CCDC114,EMP3	-7235,-1989
chr20:62179002-62179454	chr20	+	62179352	62179472	True	NM_024059,NM_080823	chr20,chr20	+,-	C20orf195,SRMS	4900,-495
chr16:18938987-18939852	chr16	+	18939196	18939273	True	NM_015092,NM_024847	chr16,chr16	-,+	SMG1,TMC7	-1470,55982
chr8:9007865-9008168	chr8	+	9007912	9008178	True	NM_153332,NM_024607,NM_001201329	chr8,chr8,chr8	+,-,-	ERI1,PPP1R3B,PPP1R3B	-147649,92,1024
chr2:108904330-108905318	chr2	+	108904487	108905358	True	NM_001056,NM_176825,NR_024439	chr2,chr2,chr2	+,+,-	SULT1C2,SULT1C2,LOC729121	47,47,-461904
chr5:176515212-176515781	chr5	+	176515364	176515778	True	NM_213647,NM_022963,NM_001199298,NM_002011	chr5,chr5,chr5,chr5	+,+,-,+	FGFR4,FGFR4,UIMC1,FGFR4	-1494,772,-81569,-1494
chr19:58892705-58893045	chr19	+	58892771	58892879	True	NM_138466,NM_001009,NM_001129730	chr19,chr19,chr19	-,+,-	ZNF837,RPS5,ZNF837	-382,5756,-382
chr2:99268953-99270812	chr2	+	99269368	99270786	True	NM_001160154,NM_014044	chr2,chr2	-,+	MGAT4A,UNC50	9209,-44384
chr11:45307995-45308236	chr11	+	45308078	45308274	True	NM_020826,NM_020229	chr11,chr11	-,+	SYT13,PRDM11	-194,-192565
chr19:41899751-41900204	chr19	+	41899751	41900028	True	NM_020158,NM_000709,NM_001164783	chr19,chr19,chr19	-,+,+	EXOSC5,BCKDHA,BCKDHA	3285,3665,3665
chr19:58459000-58459216	chr19	+	58459007	58459171	True	NR_036508,NM_005773	chr19,chr19	+,-	LOC100128398,ZNF256	55090,-2
chr15:40227053-40227738	chr15	+	40227056	40227373	True	NM_007223,NM_001013703	chr15,chr15	-,+	GPR176,EIF2AK4	-13963,-760
chr22:16288472-16288800	chr22	+	16288703	16288785	True	NR_001591,NM_001136213	chr22,chr22	+,-	psiTPTE22,POTEH	794015,-766
chr2:178123884-178124582	chr2	+	178124036	178124385	True	NM_194247,NM_006164,NR_036075,NM_001145412,NM_001145413	chr2,chr2,chr2,chr2,chr2	+,-,-,-,-	HNRNPA3,NFE2L2,MIR3128,NFE2L2,NFE2L2	-46666,5525,-3298,4283,4283
chrX:18374622-18376302	chrX	+	18374873	18376105	True	NM_006089,NR_033717,NM_003159	chrX,chrX,chrX	-,-,+	SCML2,SCML2,CDKL5	-2029,-2029,67619
chr20:31871801-31872400	chr20	+	31871870	31872435	True	NM_033197,NM_016082	chr20,chr20	+,-	C20orf114,CDK5RAP1	-980,116953
chr6:35101489-35102648	chr6	+	35101618	35102655	True	NM_018679,NM_152753,NM_001093728	chr6,chr6,chr6	-,+,-	TCP11,SCUBE3,TCP11	6582,79534,6582
chr1:109849703-109850131	chr1	+	109849893	109850121	True	NM_001408,NM_001010985	chr1,chr1	+,-	CELSR2,MYBPHL	-57303,-230
chr4:24797082-24798169	chr4	+	24797291	24798013	True	NM_001130726,NM_003102	chr4,chr4	-,+	CCDC149,SOD3	116637,-257
chr5:79273840-79274131	chr5	+	79273890	79274103	True	NM_003248,NM_001010891	chr5,chr5	+,-	THBS4,MTX3	57066,13036
chr7:73442878-73443080	chr7	+	73443001	73443069	True	NM_001081754,NM_000501,NM_001081752,NM_001081753,NM_152559,NM_001081755	chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,-,+	ELN,ELN,ELN,ELN,WBSCR27,ELN	-625,-625,-625,-625,-186146,-625
chr13:20134330-20134610	chr13	+	20134380	20134658	True	NM_199254,NM_017520	chr13,chr13	-,+	TPTE2,MPHOSPH8	-23477,73129
chr13:20134330-20134610	chr13	-	21835444	21835494	False	NM_145061,NM_024026	chr13,chr13	-,+	SKA3,MRP63	-84703,-85123
chr9:133589187-133590906	chr9	+	133589195	133590767	True	NM_007313,NR_027440	chr9,chr9	+,-	ABL1,LOC100272217	22,-134314
chr3:9854682-9855323	chr3	+	9854744	9855192	True	NR_037162,NM_133480,NM_001025930	chr3,chr3,chr3	+,-,+	TTLL3,TADA3,TTLL3	-3151,-20324,-3151
chr17:36756271-36756860	chr17	+	36756347	36756769	True	NM_025248,NM_005937	chr17,chr17	-,+	SRCIN1,MLLT6	5464,105103
chr3:136584091-136585240	chr3	+	136584534	136585101	True	NM_006153,NM_005862	chr3,chr3	+,-	NCK1,STAG1	-3545,-113289
chr17:21520614-21521194	chr17	+	21521003	21521247	True	NM_001113434,NM_001194958	chr17,chr17	-,+	C17orf51,KCNJ18	-66062,-212614
chr14:50156345-50157049	chr14	+	50156448	50156844	True	NM_172193,NM_001197330,NM_001197331,NM_002692	chr14,chr14,chr14,chr14	+,-,-,-	KLHDC1,POLE2,POLE2,POLE2	2978,-1350,-1350,-1350
chr9:139949046-139949259	chr9	+	139949051	139949281	True	NM_207309,NM_001246,NM_203468,NM_015392	chr9,chr9,chr9,chr9	+,-,-,-	UAP1L1,ENTPD2,ENTPD2,NPDC1	22671,-546,-546,-8375
chr7:75729714-75730397	chr7	+	75729923	75730162	True	NM_005918,NM_016086	chr7,chr7	+,-	MDH2,STYXL1	-52589,-52602
chr11:32606008-32606277	chr11	+	32606170	32606234	True	NM_024426,NM_006360	chr11,chr11	-,+	WT1,EIF3M	-149089,-830
chr1:1150102-1150485	chr1	+	1150252	1150484	True	NM_004195,NM_148901,NM_148902,NM_003327,NM_080605	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	TNFRSF18,TNFRSF18,TNFRSF18,TNFRSF4,B3GALT6	-8163,-8163,-8163,-704,17144
chr2:217500172-217500404	chr2	+	217500178	217500443	True	NM_000597,NM_000599	chr2,chr2	+,-	IGFBP2,IGFBP5	-2102,59879
chr1:110026875-110027796	chr1	+	110027019	110027835	True	NM_020703,NM_153340,NM_001134403,NM_001134402,NM_182580,NM_001134404,NM_001134400	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,+,+,+,+	AMIGO1,ATXN7L2,CYB561D1,CYB561D1,CYB561D1,CYB561D1,CYB561D1	24551,-509,8865,8822,8865,8865,8865
chr7:74190906-74191215	chr7	+	74191015	74191235	True	NM_173537,NM_000265	chr7,chr7	-,+	GTF2IRD2,NCF1	76656,-2757
chr7:74190906-74191215	chr7	+	72637315	72637535	False	NR_002164,NR_003186	chr7,chr7	-,+	GTF2IRD2P1,NCF1B	48173,-2692
chr7:74190906-74191215	chr7	-	74584893	74585113	False	NM_001003795,NR_003187	chr7,chr7	+,-	GTF2IRD2B,NCF1C	-76597,2753
chr3:181430697-181430947	chr3	+	181430727	181430837	True	NR_033725,NM_003106	chr3,chr3	-,+	DNAJC19,SOX2	-723165,-1066
chr6:150470122-150470727	chr6	+	150470251	150470776	True	NM_030949,NM_024518	chr6,chr6	+,-	PPP1R14C,ULBP3	-6115,-80049
chr7:117823703-117824031	chr7	+	117823721	117824053	True	NM_033427,NM_016200	chr7,chr7	-,+	CTTNBP2,NAA38	-310160,32
chr19:50709123-50709422	chr19	+	50709122	50709438	True	NM_024729,NM_001145809,NM_001077186,NM_152358	chr19,chr19,chr19,chr19	+,+,+,-	MYH14,MYH14,MYH14,IZUMO2	-2288,-2288,-2288,-42584
chr2:113994164-113994651	chr2	+	113994307	113994687	True	NR_015377,NM_003466	chr2,chr2	+,-	LOC654433,PAX8	-512,41861
chr7:47840376-47841388	chr7	+	47840487	47841389	True	NM_025031,NM_138295	chr7,chr7	+,-	C7orf69,PKD1L1	-5649,146732
chr4:46994608-46994984	chr4	+	46994659	46994917	True	NM_000809,NM_000812,NM_001204267,NM_001204266	chr4,chr4,chr4,chr4	-,+,-,-	GABRA4,GABRB1,GABRA4,GABRA4	1557,38377,655,655
chr7:150674486-150674736	chr7	+	150674494	150674702	True	NM_000238,NM_172056,NM_000603	chr7,chr7,chr7	-,-,+	KCNH2,KCNH2,NOS3	750,750,13441
chrX:19498866-19500220	chrX	+	19499258	19499734	True	NM_001173456,NM_001001671	chrX,chrX	+,-	PDHA1,MAP3K15	-137311,33700
chr2:23689850-23691634	chr2	+	23690074	23691336	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	458648,-81827
chr6:131581074-131582057	chr6	+	131581943	131582070	True	NM_001431,NM_138633	chr6,chr6	-,+	EPB41L2,AKAP7	-197481,-10494
chr4:48780096-48781140	chr4	+	48780251	48781134	True	NM_001079840,NM_015030	chr4,chr4	+,-	OCIAD1,FRYL	51925,1232
chr19:21544806-21546719	chr19	+	21544941	21546365	True	NR_027130,NM_021269	chr19,chr19	+,-	ZNF738,ZNF708	-3258,-32729
chr1:247496254-247496492	chr1	+	247496274	247496508	True	NM_032752,NM_173858	chr1,chr1	-,+	ZNF496,VN1R5	-1229,-76951
chr9:31998556-31999530	chr9	+	31998555	31999306	True	NM_014314,NM_002197	chr9,chr9	-,+	DDX58,ACO1	527083,385294
chr9:19104372-19104880	chr9	+	19104581	19104889	True	NM_006570,NM_017645	chr9,chr9	+,-	RRAGA,HAUS6	-55268,-1679
chr3:50655465-50656413	chr3	+	50655562	50656462	True	NM_013324,NM_145071,NM_004635	chr3,chr3,chr3	-,-,+	CISH,CISH,MAPKAPK3	-6300,-6300,-1012
chr8:11205108-11205310	chr8	+	11205163	11205225	True	NR_001578,NM_053279	chr8,chr8	+,-	TDH,FAM167A	-8068,119101
chr19:1385434-1386098	chr19	+	1385858	1386066	True	NM_000156,NM_024407	chr19,chr19	-,+	GAMT,NDUFS7	15536,-2026
chr3:8775212-8775422	chr3	+	8775224	8775430	True	NM_033337,NM_000916,NM_001234	chr3,chr3,chr3	+,-,+	CAV3,OXTR,CAV3	55,35920,65
chr2:87016138-87016498	chr2	+	87016154	87016542	True	NM_022780,NM_001768,NR_027353,NM_171827	chr2,chr2,chr2,chr2	+,-,-,-	RMND5A,CD8A,CD8A,CD8A	-68791,2345,2345,2345
chr15:38751928-38752964	chr15	+	38751978	38753013	True	NM_001042429,NM_001128602,NM_173611	chr15,chr15,chr15	+,-,+	FAM98B,RASGRP1,FAM98B	-5701,104046,-5701
chr8:31076822-31078115	chr8	+	31076940	31078008	True	NM_000553,NM_001015508	chr8,chr8	+,-	WRN,PURG	-186222,-185709
chr1:156648791-156649023	chr1	+	156648800	156648878	True	NM_021948,NM_006617	chr1,chr1	+,-	BCAN,NES	-37111,-1611
chr3:44752621-44753831	chr3	+	44752811	44753849	True	NM_020696,NM_033210,NM_001134442,NM_001134441,NM_001134440	chr3,chr3,chr3,chr3,chr3	-,+,+,+,+	KIAA1143,ZNF502,ZNF502,ZNF502,ZNF502	49374,285,285,285,285
chr1:26645800-26646465	chr1	+	26646158	26646224	True	NM_145345,NM_001803	chr1,chr1	-,+	UBXN11,CD52	-1402,-1798
chr1:46897947-46898927	chr1	+	46898202	46898794	True	NM_001097611,NM_001441	chr1,chr1	-,+	KNCN,FAAH	118143,-38315
chr15:74043449-74043987	chr15	+	74043761	74043979	True	NM_025240,NM_001039614	chr15,chr15	+,-	CD276,C15orf59	-67190,55
chr16:57567625-57567875	chr16	+	57567625	57567817	True	NM_153837,NM_033212	chr16,chr16	+,-	GPR114,CCDC102A	8783,2710
chr20:3714046-3715477	chr20	+	3714388	3715280	True	NM_052970,NM_001197327,NM_023068	chr20,chr20,chr20	+,+,-	HSPA12B,HSPA12B,SIGLEC1	-1122,-1122,-26613
chr6:27730692-27731470	chr6	+	27730691	27731393	True	NM_003509,NM_003519	chr6,chr6	+,-	HIST1H2AI,HIST1H2BL	44583,44371
chr8:124554338-124556180	chr8	+	124554448	124555885	True	NM_018024,NM_058229	chr8,chr8	+,-	WDYHV1,FBXO32	-125534,-1002
chr19:48283384-48284023	chr19	+	48283513	48284021	True	NM_198479,NM_003009	chr19,chr19	-,+	TPRX1,SEPW1	22890,-1722
chrX:28609889-28610566	chrX	+	28609888	28610496	True	NM_014271,NM_001017930	chrX,chrX	+,-	IL1RAPL1,DCAF8L1	-4258,-610322
chr4:53522927-53523914	chr4	+	53523276	53523770	True	NM_022832,NR_024031,NM_001134223	chr4,chr4,chr4	-,+,-	USP46,KIAA0114,USP46	1782,54850,-517
chr14:77578330-77580193	chr14	+	77578344	77580230	True	NM_174976,NM_033426	chr14,chr14	-,+	ZDHHC22,KIAA1737	27954,-13817
chr11:132813140-132813575	chr11	+	132813322	132813510	True	NM_002545,NM_016522	chr11,chr11	-,+	OPCML,NTM	-285,-1032661
chr1:147236213-147236855	chr1	+	147236270	147236644	True	NM_005266,NM_005267,NM_181703	chr1,chr1,chr1	-,+,-	GJA5,GJA8,GJA5	8890,138301,-3556
chrY:20293875-20295671	chrY	+	20293985	20295422	True	NM_004677,NM_001002906,NR_028083	chrY,chrY,chrY	+,+,-	XKRY,XKRY2,FAM41AY1	1912,1912,271573
chrY:20293875-20295671	chrY	-	19884352	19885790	False	NM_004677,NM_004825,NM_001002906	chrY,chrY,chrY	-,+,-	XKRY,CDY2A,XKRY2	-1912,251876,-1912
chr1:205538557-205538829	chr1	+	205538632	205538732	True	NM_181644,NR_027086	chr1,chr1	+,-	MFSD4,LOC284578	-571,-12869
chr1:225842751-225844411	chr1	+	225842800	225844013	True	NM_001130440,NM_018212,NM_001008493	chr1,chr1,chr1	+,-,-	SRP9,ENAH,ENAH	121501,-1955,-1955
chr14:102426335-102426864	chr14	+	102426654	102426902	True	NM_001376,NM_005348	chr14,chr14	+,-	DYNC1H1,HSP90AA1	3962,126660
chr9:95180460-95181741	chr9	+	95180771	95181476	True	NM_005014,NM_001012267	chr9,chr9	-,+	OMD,CENPP	5417,-93094
chr1:43315383-43316392	chr1	+	43315448	43316432	True	NM_015911,NM_199342	chr1,chr1	+,-	ZNF691,CCDC23	-3219,-32389
chr15:75918417-75919362	chr15	+	75918568	75919238	True	NM_001042588,NM_001042581,NM_153271,NM_005701	chr15,chr15,chr15,chr15	-,-,+,-	SNUPN,SNUPN,SNX33,SNUPN	-13,-122,22109,-122
chr1:46711925-46712679	chr1	+	46712338	46712622	True	NM_003579,NM_001142548,NR_024332	chr1,chr1,chr1	+,+,-	RAD54L,RAD54L,POMGNT1	744,744,-26361
chr5:162931216-162931935	chr5	+	162931343	162931936	True	NM_182796,NM_145266,NM_013283	chr5,chr5,chr5	+,-,+	MAT2B,NUDCD2,MAT2B	-1168,-44200,648
chrY:16637805-16638244	chrY	+	16637816	16638245	True	NR_028318,NR_028319,NM_004679,NM_014893	chrY,chrY,chrY,chrY	+,+,-,+	NLGN4Y,NLGN4Y,VCY,NLGN4Y	-3379,-1413,-539424,-2241
chr12:105305883-105306480	chr12	+	105305890	105306438	True	NM_152318,NM_032148	chr12,chr12	+,-	C12orf45,SLC41A2	73659,16090
chr15:35264423-35264861	chr15	+	35264643	35264746	True	NR_003144,NM_014691	chr15,chr15	+,-	LOC723972,AQR	264780,-2648
chrX:153599629-153599872	chrX	+	153599660	153599768	True	NM_001110556,NM_000117,NM_001456	chrX,chrX,chrX	-,+,-	FLNA,EMD,FLNA	3288,7828,3288
chr1:165508267-165509360	chr1	+	165508497	165509373	True	NM_001005214,NR_026744	chr1,chr1	+,-	LRRC52,LOC400794	4104,42018
chr13:40303093-40303315	chr13	+	40303149	40303305	True	NM_001145079,NR_036190	chr13,chr13	+,-	COG6,MIR4305	-73448,-64877
chr15:50649777-50650212	chr15	+	50649944	50650188	True	NR_026891,NR_024490,NM_181427,NM_016655,NM_005254,NM_002041,NM_016654	chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,+,-,-,-,-,-	FLJ10038,LOC100129387,GABPB1,GABPB1,GABPB1,GABPB1,GABPB1	-2868,-3624,-2339,-2339,-2339,-2339,-2339
chr6:35773462-35773897	chr6	+	35773483	35773851	True	NM_001832,NM_182548	chr6,chr6	-,+	CLPS,LHFPL5	-8381,-463
chr2:99250850-99252743	chr2	+	99250938	99252783	True	NM_001008215,NM_001160154,NM_014044	chr2,chr2,chr2	-,-,+	C2orf64,MGAT4A,UNC50	-25983,27203,-25948
chr5:139928658-139930059	chr5	+	139928830	139929968	True	NM_001035235,NM_003732	chr5,chr5	-,+	SRA1,EIF4EBP3	7760,-1630
chr10:111967671-111967873	chr10	+	111967719	111967835	True	NM_001008541,NM_005871,NM_130439	chr10,chr10,chr10	+,-,+	MXI1,SMNDC1,MXI1	2153,96922,-407
chrY:10015179-10016695	chrY	+	10015318	10016692	True	NR_003593,NR_003589	chrY,chrY	+,-	TTTY23B,TTTY1B	-266962,-403390
chr5:37364532-37364829	chr5	+	37364568	37364702	True	NM_153485,NM_018034,NM_004298	chr5,chr5,chr5	-,+,-	NUP155,WDR70,NUP155	6551,14709,6241
chr6:151707468-151708672	chr6	+	151707871	151708706	True	NM_144497,NM_020861	chr6,chr6	+,-	AKAP12,ZBTB2	-61260,4021
chrX:153979557-153979907	chrX	+	153979615	153979951	True	NM_001081573,NM_080612,NM_001142463	chrX,chrX,chrX	-,-,+	GAB3,GAB3,DKC1	-267,-267,11079
chrX:153191195-153191564	chrX	+	153191217	153191565	True	NM_001164741,NM_003491,NM_001666,NM_001146151	chrX,chrX,chrX,chrX	-,-,-,+	ARHGAP4,NAA10,ARHGAP4,AVPR2	199,8953,199,-20739
chr2:158486875-158487134	chr2	+	158486874	158487108	True	NM_001111033,NM_001111032,NM_001135098,NM_145259	chr2,chr2,chr2,chr2	-,-,+,-	ACVR1C,ACVR1C,UPP2,ACVR1C	-1475,-1475,364582,-1475
chr13:24468313-24469136	chr13	+	24468382	24468842	True	NM_001135816,NM_005932,NM_001014442,NM_001007537	chr13,chr13,chr13,chr13	+,-,+,-	PCOTH,MIPEP,PCOTH,C1QTNF9B	-4841,-4795,-5405,2335
chr13:24468313-24469136	chr13	-	24892455	24892913	False	NM_178540,NM_006437	chr13,chr13	+,-	C1QTNF9,PARP4	-8792,194087
chr9:6015683-6016035	chr9	+	6015722	6015884	True	NM_001017969,NR_024095,NR_024094,NM_012416,NM_005511	chr9,chr9,chr9,chr9,chr9	-,-,-,-,+	KIAA2026,RANBP6,RANBP6,RANBP6,MLANA	-7719,-82,-82,-104,-124864
chr6:164722392-164723126	chr6	+	164722480	164723170	True	NM_206855,NR_037593	chr6,chr6	+,-	QKI,LOC100526820	-886871,-887498
chr9:39447416-39447820	chr9	+	39447415	39447533	True	NR_027861,NM_001040065	chr9,chr9	-,+	ZNF658B,FAM75A2	-227,-91772
chr9:39447416-39447820	chr9	+	40775058	40775124	False	NR_026801,NM_033160	chr9,chr9	+,-	FAM74A3,ZNF658	-59599,17050
chr9:39447416-39447820	chr9	+	41592434	41592552	False	NM_001113541,NR_027861	chr9,chr9	+,-	FAM75A5,ZNF658B	-91811,-227
chr1:215225537-215226737	chr1	+	215225567	215226782	True	NM_001017425,NM_005401	chr1,chr1	+,-	KCNK2,PTPN14	29777,-500543
chr22:25353521-25353926	chr22	+	25353565	25353633	True	NM_001145206,NM_001001663	chr22,chr22	+,-	KIAA1671,TMEM211	70307,-18251
chr10:47734753-47736570	chr10	+	47735223	47735965	True	NR_024495,NM_001630	chr10,chr10	-,+	LOC642826,ANXA8L2	-491729,10954
chr10:47734753-47736570	chr10	-	47186025	47186275	False	NM_001137549,NM_001137548,NM_005972,NM_001137556	chr10,chr10,chr10,chr10	-,-,+,-	FAM25G,FAM25C,PPYR1,FAM25B	-4337,-4337,-102742,-4337
chr10:47734753-47736570	chr10	-	49212335	49212889	False	NM_001137549,NM_001137548,NM_002750,NM_001137556	chr10,chr10,chr10,chr10	-,-,+,-	FAM25G,FAM25C,MAPK8,FAM25B	-4510,-4510,396797,-4510
chr16:29790925-29791667	chr16	+	29790925	29791705	True	NM_175900,NM_152338	chr16,chr16	-,+	C16orf54,ZG16	-33585,-1415
chr3:190122718-190122938	chr3	+	190122774	190122945	True	NM_207316,NM_006580	chr3,chr3	-,+	TMEM207,CLDN16	44779,-17164
chr1:166808313-166808559	chr1	+	166808324	166808456	True	NM_017542,NM_053053	chr1,chr1	+,-	POGK,TADA1	267,37248
chr14:102021200-102021811	chr14	+	102021606	102021860	True	NR_002770,NR_031649,NM_001362	chr14,chr14,chr14	-,-,+	DIO3OS,MIR1247,DIO3	203,4949,5827
chr4:57345804-57346516	chr4	+	57345939	57346384	True	NM_002703,NM_006947	chr4,chr4	-,+	PPAT,SRP72	-44137,-12233
chrX:16736742-16737747	chrX	+	16737272	16737786	True	NM_032796,NM_019857,NM_175859,NR_033181,NM_001144002	chrX,chrX,chrX,chrX,chrX	+,-,-,+,-	SYAP1,CTPS2,CTPS2,SYAP1,CTPS2	-80,-6213,-6497,-80,-6932
chr2:26986789-26987098	chr2	+	26986992	26987084	True	NM_017877,NM_001029881	chr2,chr2	+,-	C2orf18,CIB4	57,-122781
chr5:79786136-79787402	chr5	+	79786471	79787391	True	NM_205548,NM_001004441	chr5,chr5	+,-	FAM151B,ANKRD34B	-2733,78972
chr17:79763003-79763238	chr17	+	79763131	79763203	True	NM_000160,NM_001093767	chr17,chr17	+,-	GCGR,FAM195B	-1172,28014
chr19:46141529-46141779	chr19	+	46141533	46141821	True	NR_029886,NM_012155,NM_001193268,NM_001193269,NM_000164,NR_034098	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,+,-	MIR330,EML2,EML2,EML2,GIPR,EML2	574,904,7004,5214,29680,904
chr9:133970979-133971644	chr9	+	133971067	133971637	True	NM_001185095,NM_001185096,NM_031426,NM_001145106,NR_033701	chr9,chr9,chr9,chr9,chr9	+,+,+,-,+	AIF1L,AIF1L,AIF1L,FIBCD1,AIF1L	225,225,225,-156612,225
chr5:56595887-56596274	chr5	+	56595896	56596177	True	NM_001127236,NM_001017992	chr5,chr5	+,-	GPBP1,ACTBL2	-86047,182516
chr11:10590998-10592382	chr11	+	10591017	10591978	True	NM_006691,NR_034093	chr11,chr11	-,+	LYVE1,LOC100129827	-652,-28246
chr12:133462818-133463411	chr12	+	133462986	133463452	True	NM_018223,NM_019591,NM_001161346,NM_001161347,NM_001161344,NM_001161345	chr12,chr12,chr12,chr12,chr12,chr12	-,+,-,-,-,-	CHFR,ZNF26,CHFR,CHFR,CHFR,CHFR	802,99603,802,802,802,802
chr1:52869333-52869917	chr1	+	52869431	52869871	True	NM_032864,NM_004153,NM_001190818,NM_001190819	chr1,chr1,chr1,chr1	+,-,-,-	PRPF38A,ORC1,ORC1,ORC1	347,322,322,322
chr7:30793495-30793913	chr7	+	30793620	30793902	True	NM_001202481,NM_006774,NR_037598,NM_001199219	chr7,chr7,chr7,chr7	-,+,+,+	CRHR2,INMT,INMT-FAM188B,INMT	-53901,-1920,-1920,-1920
chr2:66664757-66664958	chr2	+	66664764	66664830	True	NM_181784,NM_002398	chr2,chr2	-,+	SPRED2,MEIS1	-1005108,-2283
chr11:71813311-71813925	chr11	+	71813330	71813837	True	NR_026886,NM_017907	chr11,chr11	+,-	LRTOMT,LAMTOR1	-21689,647
chr17:4048373-4049304	chr17	+	4048392	4049026	True	NM_144611,NM_015113,NR_023346,NR_023347	chr17,chr17,chr17,chr17	+,-,+,+	CYB5D2,ZZEF1,CYB5D2,CYB5D2	-1981,-2139,-1981,-1981
chr1:200860201-200860701	chr1	+	200860349	200860706	True	NM_001142569,NM_018265,NM_017596	chr1,chr1,chr1	+,+,-	C1orf106,C1orf106,KIF21B	3292,33,132175
chr12:120103620-120104414	chr12	+	120103657	120104443	True	NR_031589,NM_006253	chr12,chr12	-,+	MIR1178,PRKAB1	47136,1317
chr2:47377917-47379038	chr2	+	47378057	47378748	True	NM_020458,NM_001163561,NM_173649	chr2,chr2,chr2	+,-,-	TTC7A,C2orf61,C2orf61	-209796,3820,3820
chr4:9535977-9536518	chr4	+	9536166	9536526	True	NR_031688,NM_001040448	chr4,chr4	-,+	MIR548I2,DEFB131	21461,-89957
chr13:77567069-77568132	chr13	+	77567259	77568094	True	NM_006493,NM_012158	chr13,chr13	+,-	CLN5,FBXL3	-1251,33287
chr1:149284144-149284533	chr1	+	149284184	149284577	True	NM_001024599,NR_027002	chr1,chr1	-,+	HIST2H2BF,LOC388692	114702,-4761
chr1:149284144-149284533	chr1	+	149670045	149670095	False	NM_001161334,NM_000566	chr1,chr1	-,+	HIST2H2BF,FCGR1A	113883,84154
chr14:94424232-94425058	chr14	+	94424324	94425056	True	NM_016150,NR_024182,NM_138344	chr14,chr14,chr14	-,+,+	ASB2,C14orf48,FAM181A	-557,38559,-39117
chr1:204121558-204122028	chr1	+	204121741	204121989	True	NM_018208,NM_005686	chr1,chr1	-,+	ETNK2,SOX13	-434,-79546
chr10:48862521-48862992	chr10	+	48862626	48863041	True	NR_033172,NM_153034	chr10,chr10	-,+	FRMPD2P1,ZNF488	-16,-507596
chr10:48862521-48862992	chr10	+	46675726	46676141	False	NR_027632,NM_015605	chr10,chr10	+,-	FAM35B,PTPN20B	221499,-34723
chr10:48862521-48862992	chr10	+	49383178	49383593	False	NR_033178,NR_033172,NM_002750	chr10,chr10,chr10	-,-,+	FRMPD2,FRMPD2P1,MAPK8	18,18,226093
chr11:72433969-72435358	chr11	+	72434507	72435237	True	NM_015242,NM_001135190,NM_033388	chr11,chr11,chr11	-,-,+	ARAP1,ARAP1,ATG16L2	-1104,-1104,90213
chr3:184970963-184971673	chr3	+	184971038	184971657	True	NM_001966,NM_004721,NM_001166415	chr3,chr3,chr3	-,+,-	EHHADH,MAP3K13,EHHADH	279,109312,279
chr22:23524375-23524772	chr22	+	23524383	23524749	True	NM_004327,NM_021574,NM_014433	chr22,chr22,chr22	+,+,-	BCR,BCR,RTDR1	-1882,-1882,-40142
chr20:35917654-35918004	chr20	+	35917832	35918046	True	NM_022077,NM_021081,NM_001003897	chr20,chr20,chr20	+,-,+	MANBAL,GHRH,MANBAL	4,-32533,4
chr19:46273924-46274218	chr19	+	46274021	46274103	True	NM_175875,NM_001081563,NM_017659	chr19,chr19,chr19	-,-,+	SIX5,DMPK,QPCTL	-1524,9808,-78331
chr16:14724915-14725190	chr16	+	14725102	14725214	True	NM_002582,NM_001134477,NM_016561	chr16,chr16,chr16	-,-,+	PARN,PARN,BFAR	-978,-982,1453
chr19:52771436-52771807	chr19	+	52771738	52771861	True	NM_001010851,NM_001102657	chr19,chr19	+,-	ZNF766,ZNF836	962,-96842
chr17:58470947-58472263	chr17	+	58470964	58471880	True	NM_181707,NM_032582	chr17,chr17	+,-	C17orf64,USP32	27984,-1378
chr11:8986691-8987025	chr11	+	8986743	8986981	True	NM_182901,NM_020644	chr11,chr11	+,-	C11orf17,TMEM9B	-53992,-754
chr16:75252681-75253241	chr16	+	75252746	75253178	True	NM_001025200,NM_001906	chr16,chr16	-,+	CTRB2,CTRB1	-11674,-51
chr15:42647496-42648150	chr15	+	42647681	42647903	True	NM_173087,NM_000070,NM_024344,NM_001110503	chr15,chr15,chr15,chr15	+,+,+,-	CAPN3,CAPN3,CAPN3,TMEM87A	3794,3794,3794,-81926
chr9:112260761-112261189	chr9	+	112260847	112261213	True	NM_001145368,NM_002829,NM_001037293	chr9,chr9,chr9	-,-,+	PTPN3,PTPN3,PALM2	-254,-254,141854
chr17:72540747-72542115	chr17	+	72540763	72542020	True	NM_152460,NM_006678	chr17,chr17	+,-	C17orf77,CD300C	39036,313
chr3:24537203-24537557	chr3	+	24537242	24537586	True	NM_001145425,NM_001128176,NM_000461,NM_001128177	chr3,chr3,chr3,chr3	+,-,-,-	NR1D2,THRB,THRB,THRB	-549681,-976,-929,-929
chr19:49924606-49925676	chr19	+	49924615	49925707	True	NM_001195256,NM_178449	chr19,chr19	+,-	LOC645971,PTH2	3980,1041
chr1:51425837-51426046	chr1	+	51425937	51426059	True	NM_001262,NM_007051,NM_078626	chr1,chr1,chr1	+,-,+	CDKN2C,FAF1,CDKN2C	8307,-1,9582
chr11:63997398-63997661	chr11	+	63997440	63997570	True	NM_031472,NM_001160389,NM_001033678,NM_032344,NM_005528,NM_003377,NM_001160392,NM_001160393,NM_001160390,NM_001128613,NM_001128612	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,+,+,+,-,-,-,+,+	TRPT1,TRPT1,TRPT1,NUDT22,DNAJC4,VEGFB,TRPT1,TRPT1,TRPT1,NUDT22,NUDT22	-3714,-3714,-3714,-3754,182,4695,-3714,-4099,-3714,-3754,-3754
chr2:28113682-28114460	chr2	+	28113735	28114476	True	NM_004899,NM_199191,NM_199192,NM_199193,NM_199194,NM_022128,NR_028308	chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,+,-,-	BRE,BRE,BRE,BRE,BRE,RBKS,LOC100302650	-229,-229,-229,-304,-304,-512,-48
chr6:117740635-117741359	chr6	+	117740701	117741393	True	NM_173674,NM_002944	chr6,chr6	+,-	DCBLD1,ROS1	62426,5675
chr4:165953698-165954196	chr4	+	165953758	165954058	True	NM_001012414,NM_152620	chr4,chr4	-,+	TRIM61,TRIM60	-54940,-659
chr7:28448494-28448780	chr7	+	28448511	28448726	True	NM_182898,NM_175061	chr7,chr7	+,-	CREB5,JAZF1	3417,-228074
chr19:44561539-44562773	chr19	+	44561747	44562791	True	NR_033341,NM_013361	chr19,chr19	-,+	LOC100379224,ZNF223	54595,-5643
chr7:99096921-99097464	chr7	+	99097050	99097464	True	NM_145102,NM_014569,NM_032164	chr7,chr7,chr7	+,+,-	ZKSCAN5,ZKSCAN5,ZNF394	4808,5108,463
chr11:69062658-69063099	chr11	+	69062716	69063132	True	NM_145015,NM_138768	chr11,chr11	-,+	MRGPRF,MYEOV	-281866,-1145
chr15:45877836-45879070	chr15	+	45877995	45879043	True	NM_012388,NM_013309	chr15,chr15	+,-	PLDN,SLC30A4	373,-62993
chr22:30687538-30688687	chr22	+	30687559	30688409	True	NM_001037666,NM_001017437	chr22,chr22	-,+	GATSL3,CCDC157	-1943,64217
chr5:65439044-65439858	chr5	+	65439044	65439890	True	NR_028474,NM_001077199,NM_139168	chr5,chr5,chr5	-,+,+	LOC100303749,SREK1,SREK1	-197643,194,772
chr11:32851684-32851916	chr11	+	32851769	32851963	True	NM_001008391,NM_024081	chr11,chr11	-,+	CCDC73,PRRG4	-35582,-331
chr12:74930758-74931260	chr12	+	74930833	74931318	True	NM_001136262,NM_139136	chr12,chr12	+,-	ATXN7L3B,KCNC2	232,672253
chr7:39601388-39602467	chr7	+	39601667	39602522	True	NM_138701,NM_020192	chr7,chr7	-,+	C7orf11,C7orf36	571788,3480
chr22:36116260-36116541	chr22	+	36116293	36116571	True	NM_030642,NM_203377	chr22,chr22	+,-	APOL5,MB	-2433,-96892
chr7:142915110-142916124	chr7	+	142915393	142916074	True	NM_176882,NM_014690	chr7,chr7	+,-	TAS2R40,FAM131B	3097,143156
chr19:53447980-53449121	chr19	+	53448151	53449016	True	NM_152473,NR_037805	chr19,chr19	+,-	HERV-V1,ZNF321	68327,-2304
chr1:153584307-153584744	chr1	+	153584459	153584571	True	NM_080388,NM_006271,NM_020672	chr1,chr1,chr1	-,+,-	S100A16,S100A1,S100A14	993,16301,4269
chr5:75699497-75699746	chr5	+	75699516	75699770	True	NM_006633,NM_004101	chr5,chr5	+,-	IQGAP2,F2RL2	-418,219520
chr5:1293729-1294030	chr5	+	1293896	1294034	True	NM_182632,NM_001193376,NM_198253	chr5,chr5,chr5	+,-,-	SLC6A18,TERT,TERT	-68477,1178,1178
chr15:93017208-93017638	chr15	+	93017356	93017686	True	NR_021493,NM_153040	chr15,chr15	-,+	LOC100144604,C15orf32	97857,-2500
chr7:44363147-44363488	chr7	+	44363189	44363397	True	NM_172078,NM_172079,NM_172081,NM_172080,NM_172083,NM_172082,NM_172084,NM_001220,NM_006555	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,-,-,-,+	CAMK2B,CAMK2B,CAMK2B,CAMK2B,CAMK2B,CAMK2B,CAMK2B,CAMK2B,YKT6	1883,1883,1883,1883,1883,1883,1883,1883,-122662
chr1:48427871-48429511	chr1	+	48428216	48429560	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	33052,258796
chr1:236680222-236681263	chr1	+	236680345	236680823	True	NM_201545,NM_201544,NM_201543,NR_034040,NM_006499	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	LGALS8,LGALS8,LGALS8,LOC100287902,LGALS8	690,6203,5915,7042,5915
chr1:46929817-46930423	chr1	+	46929915	46930433	True	NM_147192,NM_001097611	chr1,chr1	+,-	DMBX1,KNCN	42234,86504
chr1:217804734-217805244	chr1	+	217804737	217805187	True	NM_138796,NM_018040	chr1,chr1	+,-	SPATA17,GPATCH2	-93,-328
chrX:70987260-70987617	chrX	+	70987275	70987633	True	NR_001568,NM_001145140,NM_001145139	chrX,chrX,chrX	-,+,+	BCYRN1,CXorf49,CXorf49B	-38313,-4186,-4186
chrX:70987260-70987617	chrX	-	70933641	70933999	False	NR_034005,NM_001145140,NM_001145139	chrX,chrX,chrX	+,-,-	FLJ46446,CXorf49,CXorf49B	-16646,4186,4186
chr5:180256794-180257393	chr5	+	180256952	180257410	True	NR_027183,NM_001114617	chr5,chr5	+,-	LOC729678,MGAT1	-44,-19815
chr13:113025584-113027046	chr13	+	113025782	113026790	True	NM_006322,NM_145248	chr13,chr13	-,+	TUBGCP3,SPACA7	215741,3860
chr16:10275902-10276224	chr16	+	10276104	10276272	True	NM_024997,NM_001134408,NM_001134407,NM_000833	chr16,chr16,chr16,chr16	+,-,-,-	ATF7IP2,GRIN2A,GRIN2A,GRIN2A	246452,-180,41,389
chr13:107206954-107207559	chr13	+	107207253	107207431	True	NM_018011,NR_034119	chr13,chr13	-,+	ARGLU1,LOC728192	13133,-178401
chr19:1755074-1755316	chr19	+	1755092	1755274	True	NM_001178002,NM_001080488	chr19,chr19	-,+	ATP8B3,ONECUT3	56975,-1481
chr19:37077905-37078972	chr19	+	37078348	37078837	True	NM_020951,NM_032825	chr19,chr19	-,+	ZNF529,ZNF382	-14151,17383
chr17:62833477-62833707	chr17_ctg5_hap1	+	183403	183597	False	NM_014798,NR_027774,NR_027782,NM_001113738	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	-,-,-,+	PLEKHM1,PLEKHM1,PLEKHM1,ARL17A	-189,-189,-189,12123
chr17:62833477-62833707	chr17	+	62833489	62833753	True	NR_024386,NM_001165933	chr17,chr17	-,+	PLEKHM1P,RGS9	-187,299702
chr17:62833477-62833707	chr17	+	43568332	43568526	False	NR_037772,NM_014798,NR_027774,NR_027782	chr17,chr17,chr17,chr17	+,-,-,-	CRHR1,PLEKHM1,PLEKHM1,PLEKHM1	129183,-186,-186,-186
chr12:56545647-56545960	chr12	+	56545687	56545961	True	NM_021019,NM_002475,NM_079423,NM_001130420,NM_001199629	chr12,chr12,chr12,chr12,chr12	+,+,+,-,+	MYL6,MYL6B,MYL6,SMARCC2,MYL6B	6083,242,6083,37440,242
chr1:154533667-154534037	chr1	+	154533823	154534063	True	NM_000748,NM_017582	chr1,chr1	+,-	CHRNB2,UBE2Q1	6193,-2703
chr12:123317998-123319279	chr12	+	123318027	123319067	True	NM_003959,NM_024667	chr12,chr12	+,-	HIP1R,VPS37B	971,61695
chr3:128446522-128446748	chr3	+	128446557	128446785	True	NM_002950,NM_004637	chr3,chr3	-,+	RPN1,RAB7A	-76838,-1636
chr10:48255655-48255931	chr10	+	48255824	48255948	True	NM_001137549,NM_001137548,NM_001137556,NM_001098845,NM_001040084,NM_002900	chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,-	FAM25G,FAM25C,FAM25B,ANXA8L1,ANXA8,RBP3	-8213,-8213,-8213,-568,-650,135093
chr10:48255655-48255931	chr10	-	49199217	49199341	False	NM_001137549,NM_001137548,NM_002750,NM_001137556	chr10,chr10,chr10,chr10	-,-,+,-	FAM25G,FAM25C,MAPK8,FAM25B	8534,8534,410345,8534
chr10:48255655-48255931	chr10	-	47173398	47173522	False	NM_001137549,NM_001137548,NM_005972,NM_001137556,NM_001098845,NM_001040084	chr10,chr10,chr10,chr10,chr10,chr10	-,-,+,-,-,-	FAM25G,FAM25C,PPYR1,FAM25B,ANXA8L1,ANXA8	8216,8216,-89915,8216,568,650
chr10:48255655-48255931	chr10	+	47747507	47747631	False	NR_024495,NM_001630	chr10,chr10	-,+	LOC642826,ANXA8L2	-504013,-638
chr11:62034457-62034810	chr11	+	62034457	62034825	True	NM_002411,NM_206998	chr11,chr11	+,-	SCGB2A2,SCGB1D4	2804,31761
chr6:33422484-33423044	chr6	+	33422661	33423081	True	NM_152735,NM_015921	chr6,chr6	+,-	ZBTB9,CUTA	-356,-36596
chr6:33422484-33423044	chr6_ssto_hap7	+	4902905	4903325	False	NM_001014840	chr6_ssto_hap7	-	CUTA	-36594
chr14:104603151-104603387	chr14	+	104603172	104603428	True	NM_004894,NM_015656	chr14,chr14	-,+	C14orf2,KIF26A	-215269,1631
chr2:61291389-61292892	chr2	+	61291846	61292675	True	NM_032506,NM_144709,NM_001129993	chr2,chr2,chr2	+,-,+	KIAA1841,PUS10,KIAA1841	687,-46481,330
chr6:51907898-51908382	chr6	+	51907969	51908403	True	NR_029713,NM_138694	chr6,chr6	+,-	MIR206,PKHD1	100743,44070
chr19:50318436-50318691	chr19	+	50318659	50318725	True	NM_025129,NR_033269,NM_001171937,NM_030973	chr19,chr19,chr19,chr19	-,-,-,+	FUZ,FUZ,FUZ,MED25	-2092,-2092,-2092,2810
chr12:56581970-56582189	chr12	+	56582020	56582204	True	NM_139067,NM_003075,NM_001130420,NM_079423	chr12,chr12,chr12,chr12	-,-,-,+	SMARCC2,SMARCC2,SMARCC2,MYL6	1197,1197,1197,-30026
chr1:93812288-93812561	chr1	+	93812306	93812581	True	NR_034089,NM_001938	chr1,chr1	-,+	LOC100131564,DR1	-938,-879
chr8:92979523-92980613	chr8	+	92979531	92980638	True	NM_175636,NM_052832	chr8,chr8	-,+	RUNX1T1,SLC26A7	49320,-718066
chr12:31797663-31798511	chr12	+	31797690	31798523	True	NM_001135864,NM_144973	chr12,chr12	+,-	METTL20,DENND5B	1570,-53738
chr9:115141391-115142039	chr9	+	115141484	115141834	True	NM_032303,NR_036085,NM_001195822,NR_036651	chr9,chr9,chr9,chr9	+,-,+,+	HSDL2,MIR3134,HSDL2,HSDL2	354,-28939,354,354
chr16:2889921-2891065	chr16	+	2890224	2891072	True	NR_026864,NM_145252	chr16,chr16	-,+	PRSS30P,ZG16B	1730,-10102
chr16:75019214-75019491	chr16	+	75019216	75019326	True	NM_030581,NM_032268	chr16,chr16	-,+	WDR59,ZNRF1	-199,13588
chr15:101081531-101083164	chr15	+	101081818	101082913	True	NM_024708,NM_178842	chr15,chr15	+,-	ASB7,LASS3	59841,2069
chr13:52371976-52373614	chr13	+	52372012	52373513	True	NM_031290,NM_001031719,NM_024705	chr13,chr13,chr13	+,-,-	CCDC70,DHRS12,DHRS12	62603,4771,4830
chr4:81186962-81187537	chr4	+	81187028	81187530	True	NM_001145794,NM_004464,NM_033143	chr4,chr4,chr4	-,+,+	ANTXR2,FGF5,FGF5	-192551,211,211
chr3:53291037-53292298	chr3	+	53291113	53292337	True	NM_001064,NM_001135055,NM_212539	chr3,chr3,chr3	-,-,+	TKT,TKT,PRKCD	-983,-983,-95954
chr12:64783570-64784041	chr12	+	64783569	64783947	True	NM_007235,NM_001170633,NM_001099676	chr12,chr12,chr12	+,-,-	XPOT,C12orf56,C12orf56	14205,448,448
chr16:56659645-56660395	chr16	+	56659653	56660203	True	NM_175617,NR_036677,NM_176870,NR_001447,NM_005950	chr16,chr16,chr16,chr16,chr16	+,+,+,+,-	MT1E,MT1JP,MT1M,MT1L,MT1G	-119,9447,6330,-8331,41824
chr16:31711686-31712032	chr16	+	31711728	31712068	True	NR_027011,NR_024034	chr16,chr16	-,+	CSDAP1,KIAA0664L3	-130883,-33
chr22:42916463-42917196	chr22	+	42916631	42917175	True	NR_027786,NM_015703	chr22,chr22	+,-	SERHL,RRP7A	-20097,-802
chr1:44871295-44871632	chr1	+	44871351	44871650	True	NM_018150,NM_024066	chr1,chr1	+,-	RNF220,ERI3	-442,-50412
chr3:143691599-143691935	chr3	+	143691601	143691931	True	NM_173653,NM_001134470,NM_173552	chr3,chr3,chr3	-,+,+	SLC9A9,C3orf58,C3orf58	-124228,235,-1012
chr19:45407229-45407648	chr19	+	45407239	45407483	True	NM_145288,NM_000041	chr19,chr19	-,+	ZNF296,APOE	172255,1555
chr7:152143886-152144691	chr7	+	152143914	152144740	True	NR_002935,NM_170606	chr7,chr7	+,-	FABP5P3,MLL3	-9985,-10824
chr8:27470416-27470758	chr8	+	27470534	27470652	True	NM_001831,NM_016240,NM_203339,NM_001171138	chr8,chr8,chr8,chr8	-,+,-,-	CLU,SCARA3,CLU,CLU	1725,20924,-1596,-1266
chr14:55499793-55501737	chr14	+	55499825	55501290	True	NM_199421,NM_007086,NM_001008396,NM_080867	chr14,chr14,chr14,chr14	+,-,-,+	SOCS4,WDHD1,WDHD1,SOCS4	-6038,-6006,-6006,-6038
chrX:38421501-38421702	chrX	+	38421506	38421734	True	NM_001034853,NM_004615	chrX,chrX	-,+	RPGR,TSPAN7	-234718,-826
chr14:24584840-24586493	chr14	+	24585029	24586479	True	NM_016049,NM_001163484,NM_181357,NR_028100,NR_028099,NM_025230	chr14,chr14,chr14,chr14,chr14,chr14	-,+,+,+,+,+	FAM158A,DCAF11,DCAF11,DCAF11,DCAF11,DCAF11	24368,-1174,-586,-588,-1094,-1094
chr15:83209676-83210651	chr15	+	83209685	83210351	True	NM_001199057,NR_033579,NM_001021	chr15,chr15,chr15	-,+,-	LOC100505503,LOC440297,RPS17	-477,-79708,-477
chr15:83209676-83210651	chr15	+	82825343	82826009	False	NM_001199057,NR_033579,NM_001021	chr15,chr15,chr15	-,+,-	LOC100505503,LOC440297,RPS17	-478,-71952,-478
chrX:40137440-40137862	chrX	+	40137543	40137781	True	NM_001123384,NM_005765	chrX,chrX	-,+	BCOR,ATP6AP2	-100961,302434
chr1:92416436-92417185	chr1	+	92416621	92417010	True	NM_207189,NM_001195684,NM_001726	chr1,chr1,chr1	+,-,+	BRDT,TGFBR3,BRDT	-1744,-45062,698
chr11:128739018-128739547	chr11	+	128739078	128739540	True	NM_153765,NM_153764,NM_153767,NM_153766,NM_000890	chr11,chr11,chr11,chr11,chr11	-,-,-,-,+	KCNJ1,KCNJ1,KCNJ1,KCNJ1,KCNJ5	-1810,-1810,-1810,-1810,21772
chr11:47870260-47870992	chr11	+	47870303	47870977	True	NM_015231,NM_001098503	chr11,chr11	-,+	NUP160,PTPRJ	-246,131132
chr22:30983370-30984768	chr22	+	30983605	30984317	True	NM_000355,NM_014303	chr22,chr22	+,-	TCN2,PES1	18752,3627
chr11:46367058-46367972	chr11	+	46367070	46367790	True	NM_001199266,NM_001199267,NM_000741,NM_001199268,NM_201533,NM_003646	chr11,chr11,chr11,chr11,chr11,chr11	+,+,-,+,+,+	DGKZ,DGKZ,CHRM4,DGKZ,DGKZ,DGKZ	1165,1165,40367,1165,-304,1165
chr15:73071882-73072492	chr15	+	73071944	73072453	True	NM_031284,NR_023319,NR_023318,NM_033028	chr15,chr15,chr15,chr15	-,-,-,+	ADPGK,ADPGK,ADPGK,BBS4	3726,3726,3726,-93469
chr13:113777787-113778418	chr13	+	113777875	113778435	True	NM_000504,NM_001127202	chr13,chr13	+,-	F10,PCID2	-813,84644
chr1:67377884-67379385	chr1	+	67378362	67379342	True	NM_001077700,NM_024763	chr1,chr1	+,-	MIER1,WDR78	11235,11278
chr8:26241653-26242183	chr8	+	26241656	26242180	True	NM_007257,NM_004331	chr8,chr8	-,+	PNMA2,BNIP3L	129353,-1185
chr16:8961912-8962127	chr16	+	8961924	8962086	True	NM_014316,NM_001042476,NM_000303	chr16,chr16,chr16	-,-,+	CARHSP1,CARHSP1,PMM2	827,212,-70305
chr16:25121977-25122382	chr16	+	25122025	25122269	True	NM_018054,NM_001032391,NM_016309	chr16,chr16,chr16	-,+,+	ARHGAP17,LCMT1,LCMT1	-95350,777,777
chr9:130952965-130953518	chr9	+	130953016	130953438	True	NM_001005336,NM_001131018,NM_001131017,NM_001131016	chr9,chr9,chr9,chr9	+,-,-,-	DNM1,CIZ1,CIZ1,CIZ1	12224,480,480,480
chr5:68485836-68486639	chr5	+	68485883	68486338	True	NM_176816,NM_022909	chr5,chr5	-,+	CCDC125,CENPH	130126,-559
chr16:28619682-28620027	chr16	+	28619842	28619934	True	NM_177529,NM_138414,NM_177530,NM_001055,NM_177534	chr16,chr16,chr16,chr16,chr16	-,+,-,-,-	SULT1A1,CCDC101,SULT1A1,SULT1A1,SULT1A1	1473,-54644,765,1473,765
chr21:44773513-44774160	chr21	+	44773669	44774209	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	95694,72843
chr19:54498045-54498957	chr19	+	54498052	54498876	True	NM_145814,NM_145815,NM_198481,NM_031897	chr19,chr19,chr19,chr19	+,+,-,+	CACNG6,CACNG6,VSTM1,CACNG6	-2561,-2561,68381,-2561
chr11:89535660-89537226	chr11	+	89536165	89537155	True	NM_020358,NR_028346	chr11,chr11	-,+	TRIM49,TRIM53	4638,38009
chr11:89535660-89537226	chr11	-	89769422	89769709	False	NM_001195234,NR_028346	chr11,chr11	+,-	TRIM49L2,TRIM53	-5202,-33746
chr19:12247975-12249556	chr19	+	12248136	12249340	True	NM_003437,NM_001203250,NM_021143	chr19,chr19,chr19	+,-,-	ZNF136,ZNF20,ZNF20	24531,1933,1933
chr2:71691589-71692285	chr2	+	71691804	71692294	True	NM_001130982,NM_001130983,NM_001130986,NM_001130455,NM_001130984,NM_001130985,NM_020459,NM_001130987	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,+,+,-,+	DYSF,DYSF,DYSF,DYSF,DYSF,DYSF,PAIP2B,DYSF	1537,1537,1537,1537,1537,1537,-237571,1537
chr6:80721183-80721481	chr6	+	80721183	80721509	True	NM_022726,NM_001166691,NM_003318	chr6,chr6,chr6	-,+,+	ELOVL4,TTK,TTK	-63868,-6912,-6912
chr6:165471147-165472356	chr6	+	165471420	165472386	True	NM_144980,NR_027284	chr6,chr6	-,+	C6orf118,LOC441177	250776,928652
chr14:63499437-63500759	chr14	+	63499546	63500232	True	NM_139318,NM_020663	chr14,chr14	-,+	KCNH5,RHOJ	11773,170912
chr14:38679100-38679363	chr14	+	38679113	38679409	True	NM_001049,NM_175060	chr14,chr14	+,-	SSTR1,CLEC14A	-1960,46215
chr10:120504459-120506435	chr10	+	120504702	120506364	True	NM_199461,NM_153810	chr10,chr10	+,-	NANOS1,C10orf46	282863,8454
chr12:49657925-49658277	chr12	+	49658081	49658210	True	NM_001008223,NM_032704	chr12,chr12	-,+	C1QL4,TUBA1C	72811,654
chrX:8138268-8138486	chrX	+	8138334	8138412	True	NR_030380,NM_016378	chrX,chrX	+,-	MIR651,VCX2	-43379,946
chrX:8138268-8138486	chrX	+	6452188	6452266	False	NM_000351,NM_016379	chrX,chrX	+,-	STS,VCX3A	685205,943
chrX:8138268-8138486	chrX	-	7811516	7811594	False	NM_013452,NM_004650	chrX,chrX	+,-	VCX,PNPLA4	-1264,83931
chrX:8138268-8138486	chrX	-	8433763	8433841	False	NM_001001888,NM_000216	chrX,chrX	+,-	VCX3B,KAL1	-943,266436
chr19:16185791-16186017	chr19	+	16185902	16186028	True	NM_001145160,NM_003290,NM_054113	chr19,chr19,chr19	+,+,-	TPM4,TPM4,CIB3	-7637,1106,98308
chr2:242716017-242716293	chr2	+	242716118	242716182	True	NM_005018,NM_022134	chr2,chr2	-,+	PDCD1,GAL3ST2	84926,57
chr3:58295646-58296379	chr3	+	58295992	58296293	True	NM_007042,NM_004944,NM_001098783	chr3,chr3,chr3	+,-,+	RPP14,DNASE1L3,RPP14	-4069,-95594,-4071
chr4:4288779-4290321	chr4	+	4288780	4290146	True	NM_017816,NM_145291,NM_001145725	chr4,chr4,chr4	-,+,-	LYAR,ZBTB49,LYAR	1800,1777,1652
chr21:44857772-44858190	chr21	+	44857782	44858239	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	11664,-10780
chr2:38895080-38895799	chr2	+	38895213	38895812	True	NM_138801,NM_138394	chr2,chr2	+,-	GALM,HNRPLL	-2223,-65035
chr19:13049037-13049443	chr19	+	13049050	13049464	True	NM_004461,NM_005053,NM_004343	chr19,chr19,chr19	-,+,+	FARSA,RAD23A,CALR	-4492,7189,-51
chr9:127624379-127624887	chr9	+	127624488	127624696	True	NM_007209,NM_030978,NM_001045476	chr9,chr9,chr9	-,+,+	RPL35,ARPC5L,WDR38	-248,6787,-8784
chr16:14414121-14414989	chr16	+	14414369	14415017	True	NR_029854,NM_001134477	chr16,chr16	+,-	MIR365-1,PARN	-11278,309153
chr14:75593790-75594003	chr14	+	75593804	75594052	True	NM_033116,NM_024643	chr14,chr14	-,+	NEK9,FAM164C	-26,-57556
chr17:18679351-18680533	chr17	+	18679757	18680080	True	NM_016078,NM_001145045	chr17,chr17	+,-	FAM18B1,ZNF286B	4501,-94185
chr6:146349584-146349977	chr6	+	146349744	146350012	True	NM_001114329,NM_173082,NM_000838	chr6,chr6,chr6	+,-,+	GRM1,SHPRH,GRM1	-1013,-64511,-1013
chr7:45195186-45196956	chr7	+	45195473	45196797	True	NM_199122,NM_005856	chr7,chr7	-,+	TBRG4,RAMP3	-44156,569
chr4:25562902-25563356	chr4	+	25563032	25563250	True	NM_015187,NM_001177998	chr4,chr4	-,+	SEL1L3,SLC34A2	301416,94184
chr6:25281483-25282168	chr6	+	25281642	25282034	True	NM_017640,NM_001173977,NR_027626	chr6,chr6,chr6	+,+,-	LRRC16A,LRRC16A,CMAH	-2040,-2040,-143022
chr15:77713480-77714880	chr15	+	77713586	77714605	True	NM_018200,NM_024776	chr15,chr15	+,-	HMG20A,PEAK1	-394,-136253
chr16:56716365-56717094	chr16	+	56716389	56717047	True	NM_005952,NM_005950,NR_003669	chr16,chr16,chr16	+,-,+	MT1X,MT1G,MT1IP	-58,-14412,-6791
chr10:11068292-11069928	chr10	+	11068543	11069859	True	NR_024411,NM_006561	chr10,chr10	-,+	LOC254312,CELF2	-74417,-8701
chr3:44902780-44902985	chr3	+	44902786	44902881	True	NR_030290,NM_020696,NM_144638	chr3,chr3,chr3	+,-,+	MIR564,KIAA1143,TMEM42	498,-99613,526
chr2:231277457-231277728	chr2	+	231277512	231277774	True	NM_001185015,NM_001080391,NM_003113	chr2,chr2,chr2	-,+,+	SP110,SP100,SP100	-187068,3096,3096
chr14:60184125-60184703	chr14	+	60184186	60184751	True	NM_016475,NM_206857	chr14,chr14	+,-	JKAMP,RTN1	-233076,9732
chr10:98115019-98115517	chr10	+	98115046	98115393	True	NM_033207,NM_001040102,NM_001040103,NM_004088	chr10,chr10,chr10,chr10	-,-,-,+	OPALIN,OPALIN,OPALIN,DNTT	3758,3758,3758,-51012
chr8:99095995-99096405	chr8	+	99095996	99096454	True	NM_173549,NM_005836	chr8,chr8	+,-	C8orf47,HRSP12	-19297,33014
chr5:10602736-10603219	chr5	+	10602787	10603265	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-38416,158172
chr12:54579316-54580217	chr12	+	54579602	54580064	True	NR_026656,NM_014311	chr12,chr12	+,-	LOC400043,SMUG1	-59804,2743
chr17:49242102-49243248	chr17	+	49242477	49243181	True	NM_001198682,NM_002512,NM_003971,NM_001018137,NM_001018138,NM_001018139	chr17,chr17,chr17,chr17,chr17,chr17	+,+,-,+,+,+	NME2,NME2,SPAG9,NME2,NME2,NME2	451,451,-44251,101,901,680
chr22:29071459-29072997	chr22	+	29071752	29072010	True	NM_001145418,NM_172002	chr22,chr22	-,+	TTC28,HSCB	3901,66032
chr5:10654881-10655551	chr5	+	10654941	10655599	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-90557,105838
chr17:66248143-66248798	chr17	+	66248214	66248556	True	NM_001033571,NM_001033570,NM_001033572,NM_001033574,NM_001174166,NM_016627,NM_001033569,NM_014960	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,-,+,+,+	AMZ2,AMZ2,AMZ2,AMZ2,SLC16A6,AMZ2,AMZ2,ARSG	-4125,-4125,-4125,-4125,38899,-4125,-4125,6766
chr17:66248143-66248798	chr17	-	62967585	62967642	False	NR_026903,NM_001165933	chr17,chr17	-,+	AMZ2P1,RGS9	4118,165813
chr19:49245897-49246280	chr19	+	49245900	49245966	True	NM_019113,NM_017805,NM_182575	chr19,chr19,chr19	+,-,-	FGF21,RASIP1,IZUMO1	13377,-1930,4251
chr4:77868691-77869130	chr4	+	77868701	77869177	True	NM_001029870,NM_018243	chr4,chr4	-,+	ANKRD56,SEPT11	-49699,1717
chr12:57483113-57483523	chr12	+	57483302	57483380	True	NM_015257,NM_005967	chr12,chr12	-,+	TMEM194A,NAB2	-10728,-676
chr3:98623568-98624319	chr3	+	98623659	98624088	True	NM_006100,NM_080927	chr3,chr3	+,-	ST3GAL6,DCBLD2	-172139,-3126
chr6:142621288-142622234	chr6	+	142621741	142622283	True	NM_198569,NM_020455,NM_002511,NM_001032394,NM_001032395	chr6,chr6,chr6,chr6,chr6	+,+,-,+,+	GPR126,GPR126,NMBR,GPR126,GPR126	772,772,-211805,772,772
chr10:35462601-35462909	chr10	+	35462643	35462924	True	NM_001198777,NM_182769,NM_182770,NM_182771,NM_182772	chr10,chr10,chr10,chr10,chr10	-,+,+,+,+	CUL2,CREM,CREM,CREM,CREM	-83073,1599,1599,-6227,-6227
chr11:76155837-76156164	chr11	+	76155840	76156038	True	NM_020193,NM_004705	chr11,chr11	+,-	C11orf30,PRKRIR	30,-63960
chr12:111127740-111127964	chr12	+	111127783	111127987	True	NM_001040107,NM_032369,NM_001173975	chr12,chr12,chr12	-,-,+	HVCN1,HVCN1,TCTN1	-166,-837,-75922
chr7:140399485-140400216	chr7	+	140399488	140400270	True	NM_004546,NR_024454	chr7,chr7	+,-	NDUFB2,LOC100134713	-3058,-2611
chr12:116971573-116971917	chr12	+	116971670	116971853	True	NR_027346,NR_027345,NM_024738	chr12,chr12,chr12	+,+,-	NCRNA00173,NCRNA00173,C12orf49	-481,-494,204040
chr10:74868782-74869727	chr10	+	74868870	74869774	True	NM_001142596,NM_015901	chr10,chr10	-,+	P4HA1,NUDT13	-12138,435
chr22:21045644-21045939	chr22	+	21045644	21045778	True	NM_002650,NR_026815,NR_024592	chr22,chr22,chr22	-,+,+	PI4KA,TMEM191A,POM121L4P	43227,9623,-1852
chr6:160114187-160114405	chr6	+	160114190	160114266	True	NM_001024466,NM_001024465,NM_152858,NM_000636	chr6,chr6,chr6,chr6	-,-,+,-	SOD2,SOD2,WTAP,SOD2	137,137,33885,137
chr3:121311443-121312279	chr3	+	121311489	121312324	True	NM_199420,NM_016298	chr3,chr3	-,+	POLQ,FBXO40	-46636,-155
chr6:117114202-117116127	chr6	+	117114287	117116164	True	NM_001085480,NM_173560	chr6,chr6	-,+	FAM162B,RFX6	-27401,82211
chr20:1876723-1876977	chr20	+	1876744	1876966	True	NM_080792,NM_001190892,NM_001040023,NM_001040022	chr20,chr20,chr20,chr20	+,-,+,+	SIRPA,PDYN,SIRPA,SIRPA	-1370,96536,-969,-1982
chr17:53343750-53344172	chr17	+	53343755	53344185	True	NM_002126,NM_012329	chr17,chr17	+,-	HLF,MMD	-1485,155206
chr20:25727148-25727674	chr20	+	25727318	25727712	True	NR_004846,NR_027061	chr20,chr20	+,-	LOC100134868,FAM182B	262722,49216
chr6:22567946-22568623	chr6	+	22567955	22568666	True	NM_001163558,NM_138574	chr6,chr6	-,+	PRL,HDGFL1	-264873,1011
chr1:39881330-39883309	chr1	+	39881345	39883160	True	NR_003929,NM_015038	chr1,chr1	-,+	PPIEL,KIAA0754	142260,-6226
chr9:66365094-66366914	chr9	+	66366340	66366928	True	NR_024443,NR_024496	chr9,chr9	-,+	LOC100133920,LOC442421	664104,127340
chr9:66365094-66366914	chr9	+	44018903	44019491	False	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	-388173,-334069
chr15:23890796-23891103	chr15	+	23890835	23891107	True	NM_005664,NM_019066	chr15,chr15	+,-	MKRN3,MAGEL2	-80432,1936
chr2:70531497-70533013	chr2	+	70531702	70532877	True	NM_032822,NM_016297	chr2,chr2	-,+	FAM136A,PCYOX1	-2482,-46522
chr17:58677089-58677323	chr17	+	58677095	58677349	True	NM_003620,NM_006380	chr17,chr17	+,-	PPM1D,APPBP2	194,-73515
chr1:27239631-27239898	chr1	+	27239788	27239854	True	NM_021969,NM_006600	chr1,chr1	-,+	NR0B2,NUDC	763,8369
chr6:160768457-160768725	chr6	+	160768502	160768568	True	NM_003058,NM_021977	chr6,chr6	-,+	SLC22A2,SLC22A3	-88539,856
chr10:6017827-6018140	chr10	+	6017897	6018169	True	NM_032807,NR_033494,NM_002189,NM_172200	chr10,chr10,chr10,chr10	+,-,-,-	FBXO18,IL15RA,IL15RA,IL15RA	-81599,2023,1455,1455
chr2:202212610-202213177	chr2	+	202212626	202213094	True	NM_139163,NM_001127391,NM_033356	chr2,chr2,chr2	-,-,+	ALS2CR12,ALS2CR12,CASP8	9057,9057,-87454
chr2:42418496-42418919	chr2	+	42418532	42418901	True	NM_019063,NM_004718	chr2,chr2	+,-	EML4,COX7A2L	-22099,169512
chr2:234182820-234183910	chr2	+	234182887	234183809	True	NR_003008,NM_018218	chr2,chr2	+,-	SCARNA5,USP40	562,290477
chr18:28974462-28976439	chr18	+	28974807	28976269	True	NM_177986,NM_024421	chr18,chr18	+,-	DSG4,DSC1	-18130,-231988
chr20:61561446-61561759	chr20	+	61561584	61561752	True	NM_001193370,NM_033081,NM_017896,NM_001193369,NM_022105,NM_080797,NM_080796	chr20,chr20,chr20,chr20,chr20,chr20,chr20	-,-,+,-,-,-,-	DIDO1,DIDO1,C20orf11,DIDO1,DIDO1,DIDO1,DIDO1	-3681,7602,7688,-3681,7602,7602,-3681
chr15:75498129-75498462	chr15	+	75498158	75498272	True	NM_015492,NR_030360	chr15,chr15	+,-	C15orf39,MIR631	-3988,147804
chr11:40315539-40316098	chr11	+	40315561	40316097	True	NM_020929,NM_001142930	chr11,chr11	-,+	LRRC4C,API5	-57,3017407
chr15:28567306-28567510	chr15	+	28567426	28567558	True	NM_004667,NR_033351	chr15,chr15	-,+	HERC2,GOLGA8F	-131,56225
chr15:28567306-28567510	chr15	-	28834412	28834488	False	NR_036443,NR_033351	chr15,chr15	+,-	HERC2P9,GOLGA8F	65099,-56269
chr15:28567306-28567510	chr15	+	23378346	23378396	False	NR_002824,NR_036470	chr15,chr15	-,+	HERC2P2,HERC2P7	-87,12325
chr15:28567306-28567510	chr15	+	20711566	20711642	False	NR_036432,NR_027411	chr15,chr15	-,+	HERC2P3,GOLGA8C	-133,56031
chr2:27441261-27441779	chr2	+	27441277	27441817	True	NM_021095,NM_001170795,NM_004341,NR_028323,NM_016085,NM_080592	chr2,chr2,chr2,chr2,chr2,chr2	-,+,+,-,+,+	SLC5A6,C2orf28,CAD,SLC5A6,C2orf28,C2orf28	-6102,-6109,-1070,-6102,-6109,-6429
chr11:66245093-66246998	chr11	+	66245433	66247031	True	NM_170739,NM_130443,NM_005700	chr11,chr11,chr11	-,+,+	MRPL11,DPP3,DPP3	-39123,848,848
chrX:10800966-10802723	chrX	+	10801106	10802557	True	NM_001122608,NM_033290	chrX,chrX	+,-	HCCS,MID1	326848,49310
chr15:24921906-24922626	chr15	+	24921910	24922674	True	NM_018958,NR_026647	chr15,chr15	+,-	C15orf2,PWRN2	-1420,-506857
chr1:151021011-151021748	chr1	+	151021058	151021571	True	NM_001038707,NM_017860	chr1,chr1	-,+	CDC42SE1,C1orf56	10615,-850
chr1:52342782-52343903	chr1	+	52343187	52343760	True	NM_001101662,NM_148907,NM_002525	chr1,chr1,chr1	-,+,-	NRD1,OSBPL9,NRD1	900,-147760,900
chr20:55042671-55043458	chr20	+	55042871	55043326	True	NM_080615,NM_016407	chr20,chr20	-,+	GCNT7,C20orf43	57714,320
chr12:57384705-57386479	chr12	+	57384778	57386520	True	NM_007264,NM_014830	chr12,chr12	+,-	GPR182,ZBTB39	1834,13827
chr16:23848657-23848961	chr16	+	23848781	23849007	True	NM_212535,NM_033266,NM_002738	chr16,chr16,chr16	+,-,+	PRKCB,ERN2,PRKCB	-1537,-123960,-1537
chr5:178419050-178419653	chr5	+	178419099	178419651	True	NM_001136116,NM_000843	chr5,chr5	+,-	ZNF879,GRM6	31124,2523
chr22:51015432-51015922	chr22	+	51015566	51015950	True	NM_001145137,NM_001145136,NM_001145135,NM_001145134,NR_021492,NM_005198,NM_152245,NR_027928,NM_004377,NM_152246	chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,+,-,-,-,-,-	CPT1B,CPT1B,CPT1B,CPT1B,LOC100144603,CHKB,CPT1B,CHKB-CPT1B,CPT1B,CPT1B	606,1196,1196,1196,5504,5528,1196,5528,994,994
chr8:55371497-55371720	chr8	+	55371601	55371757	True	NM_022454,NM_006330	chr8,chr8	+,-	SOX17,LYPLA1	-1157,-357024
chr7:2671270-2671539	chr7	+	2671352	2671418	True	NM_152743,NM_025250	chr7,chr7	-,+	BRAT1,TTYH3	-75960,184
chr14:20762812-20763926	chr14	+	20762837	20763925	True	NM_001042618,NM_138376	chr14,chr14	+,-	PARP2,TTC5	47847,10278
chr11:62528793-62529059	chr11	+	62528921	62529097	True	NM_002696,NM_006473,NM_024784	chr11,chr11,chr11	+,+,-	POLR2G,TAF6L,ZBTB3	7,9777,-7265
chr7:75624130-75624362	chr7	+	75624203	75624331	True	NM_031925,NR_002955	chr7,chr7	-,+	TMEM120A,SNORA14A	-211,-51153
chr17:38952631-38953236	chr17	+	38952665	38953277	True	NM_001195387,NM_181535	chr17,chr17	+,-	TMEM99,KRT28	22066,2984
chr5:79863698-79865112	chr5	+	79863701	79864597	True	NM_205548,NM_001004441	chr5,chr5	+,-	FAM151B,ANKRD34B	-79952,1757
chr9:120176054-120176391	chr9	+	120176101	120176431	True	NM_138554,NM_014010	chr9,chr9	+,-	TLR4,ASTN2	290028,936
chr2:107138176-107138563	chr2	+	107138272	107138561	True	NM_001144013,NR_003506	chr2,chr2	-,+	RGPD3,PLGLA	-53471,-135554
chr10:89421478-89422726	chr10	+	89421615	89422620	True	NM_001015880,NM_004670,NM_032810	chr10,chr10,chr10	+,+,-	PAPSS2,PAPSS2,ATAD1	-2190,-2190,155355
chr11:67777067-67777471	chr11	+	67777072	67777441	True	NM_001161473,NM_030930,NM_000694,NM_001030010	chr11,chr11,chr11,chr11	+,-,+,+	ALDH3B1,UNC93B1,ALDH3B1,ALDH3B1	-1075,-5479,348,348
chr17:80796759-80797828	chr17	+	80796759	80797753	True	NM_024702,NM_005993	chr17,chr17	-,+	ZNF750,TBCD	228,-86870
chr1:112162834-112163157	chr1	+	112162928	112163194	True	NM_002884,NM_001010935,NR_034126	chr1,chr1,chr1	+,+,-	RAP1A,RAP1A,LOC100129269	-574,-574,-11988
chr7:76139688-76139950	chr7	+	76139734	76139972	True	NM_030570,NR_003262,NM_182684	chr7,chr7,chr7	+,-,+	UPK3B,FDPSL2A,UPK3B	-40,-35417,-40
chr1:111822041-111822459	chr1	+	111822061	111822481	True	NR_003928,NM_024901	chr1,chr1	+,-	LOC149620,DENND2D	664,-78780
chr19:17488729-17489168	chr19	+	17488944	17489208	True	NM_031310,NM_133644	chr19,chr19	-,+	PLVAP,GTPBP3	-807,-40676
chr2:208577080-208577919	chr2	+	208577181	208577959	True	NM_001142300,NM_152523,NM_003468	chr2,chr2,chr2	+,+,-	CCNYL1,CCNYL1,FZD5	-968,-968,56236
chr16:23690056-23690292	chr16	+	23690134	23690260	True	NM_005030,NM_033266	chr16,chr16	+,-	PLK1,ERN2	8,34611
chrX:119009333-119011127	chrX	+	119009632	119010765	True	NM_006978,NM_004541	chrX,chrX	-,+	RNF113A,NDUFA1	-3841,-3950
chr8:42395555-42396241	chr8	+	42395692	42396209	True	NM_138436,NM_006749,NM_001135676,NM_001135675,NM_001135674	chr8,chr8,chr8,chr8,chr8	+,-,+,+,+	C8orf40,SLC20A2,C8orf40,C8orf40,C8orf40	508,916,88,729,555
chrX:49131653-49133390	chrX	+	49131815	49133362	True	NM_033215,NM_001184745,NM_014009	chrX,chrX,chrX	+,+,-	PPP1R3F,PPP1R3F,FOXP3	-5561,-5561,-10527
chr2:101768051-101768489	chr2	+	101768119	101768529	True	NM_001102426,NM_017546	chr2,chr2	-,+	TBC1D8,C2orf29	-273,100815
chr2:20499227-20500001	chr2	+	20499506	20499844	True	NM_015317,NM_004040	chr2,chr2	-,+	PUM2,RHOB	27358,146990
chr12:80310986-80312817	chr12	+	80311732	80312467	True	NM_001143886,NM_173591	chr12,chr12	-,+	PPP1R12A,OTOGL	-4041,290765
chr10:88777851-88779016	chr10	+	88778203	88779027	True	NM_024756,NM_001146157	chr10,chr10	-,+	MMRN2,FAM25A	-60778,1018
chr10:88777851-88779016	chr10	-	75425356	75425408	False	NM_004922,NM_001114133	chr10,chr10	+,-	SEC24C,SYNPO2L	78722,-9524
chrX:128914520-128914743	chrX	+	128914532	128914704	True	NM_001008222,NM_018990	chrX,chrX	-,+	ZDHHC9,SASH3	62907,-691
chr9:107327643-107328940	chr9	+	107327650	107328611	True	NM_001004483,NM_001001961	chr9,chr9	+,-	OR13C8,OR13C3	2837,-28556
chr7:127879918-127881048	chr7	+	127880352	127880772	True	NM_000230,NM_001166135	chr7,chr7	+,-	LEP,RBM28	558,103240
chr14:95110107-95110513	chr14	+	95110190	95110460	True	NM_173849,NM_173850,NR_015340	chr14,chr14,chr14	-,-,+	GSC,SERPINA12,SERPINA13	126089,-126009,-3179
chr4:7945288-7947022	chr4	+	7946132	7946842	True	NM_001134647,NR_026892,NM_198595	chr4,chr4,chr4	-,+,-	AFAP1,AFAP1-AS1,AFAP1	-4479,-190367,-4479
chr2:96675124-96675681	chr2	+	96675129	96675621	True	NM_207328,NR_003698	chr2,chr2	-,+	GPAT2,LOC729234	25156,677
chrY:13307207-13308726	chrY	+	13308257	13308534	True	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	1465763,1224906
chr11:46940259-46940484	chr11	+	46940411	46940477	True	NM_001003676,NM_002334	chr11,chr11	+,-	C11orf49,LRP4	17773,-238
chr6:41751417-41753118	chr6	+	41751685	41753015	True	NM_001134493,NM_013397,NM_006653	chr6,chr6,chr6	+,+,-	TOMM6,PRICKLE4,FRS3	2165,-3236,-4055
chr16:2889635-2889836	chr16	+	2889644	2889844	True	NR_026864,NM_145252	chr16,chr16	-,+	PRSS30P,ZG16B	2958,-9522
chr14:54864174-54864476	chr14	+	54864206	54864504	True	NM_005192,NM_005776,NM_001130851	chr14,chr14,chr14	+,-,+	CDKN3,CNIH,CDKN3	-584,43694,-584
chr4:25314588-25315134	chr4	+	25314671	25315122	True	NM_024936,NM_016955	chr4,chr4	+,-	ZCCHC4,SEPSECS	-326,-152467
chr6:117809936-117810767	chr6	+	117810021	117810704	True	NM_173674,NM_002944	chr6,chr6	+,-	DCBLD1,ROS1	-6265,-63003
chr5:180072770-180073135	chr5	+	180072773	180073173	True	NM_002020,NM_182925,NM_015455	chr5,chr5,chr5	-,-,+	FLT4,FLT4,CNOT6	3501,3501,-151407
chr22:45708694-45710218	chr22	+	45708775	45710072	True	NM_017911,NM_001009880,NM_001104595	chr22,chr22,chr22	+,-,+	FAM118A,KIAA0930,FAM118A	-3048,-72125,-3752
chr4:57333464-57333758	chr4	+	57333589	57333731	True	NM_002703,NM_006947	chr4,chr4	-,+	PPAT,SRP72	-31787,30
chr7:107197507-107198971	chr7	+	107197579	107198716	True	NM_001161520,NM_181733,NM_006348,NM_181581	chr7,chr7,chr7,chr7	-,-,-,+	COG5,COG5,COG5,DUS4L	6305,6305,6305,5715
chr1:21112810-21113089	chr1	+	21112816	21113138	True	NM_016287,NM_032409	chr1,chr1	-,+	HP1BP3,PINK1	93,-152919
chr6:13486116-13486597	chr6	+	13486145	13486425	True	NM_033069,NM_018988,NM_031244	chr6,chr6,chr6	-,-,+	C6orf114,GFOD1,SIRT5	40,1412,88366
chr14:103592200-103592524	chr14	+	103592205	103592573	True	NR_033938,NM_006291	chr14,chr14	-,+	LOC100131366,TNFAIP2	62842,90
chr1:153948859-153949171	chr1	+	153949069	153949217	True	NM_130898,NM_014437,NM_002870,NM_006694	chr1,chr1,chr1,chr1	+,-,-,-	CREB3L4,SLC39A1,RAB13,JTB	-8736,-8881,9639,1284
chr4:49284329-49284825	chr4	+	49284494	49284558	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-296280,-375679
chr4:49284329-49284825	chr4	-	49329738	49329802	False	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-341524,-420923
chr1:25073115-25073402	chr1	+	25073160	25073228	True	NM_013943,NM_004350	chr1,chr1	+,-	CLIC4,RUNX3	-1454,183592
chr17:36605123-36605624	chr17	+	36605334	36605528	True	NM_001004334,NM_001199417	chr17,chr17	-,+	GPR179,ARHGAP23	-105641,-20679
chr8:42392486-42393075	chr8	+	42392580	42393109	True	NM_138436,NM_006749,NM_001135676,NM_001135675,NM_001135674	chr8,chr8,chr8,chr8,chr8	+,-,+,+,+	C8orf40,SLC20A2,C8orf40,C8orf40,C8orf40	3608,4016,3188,3829,3655
chr3:46394709-46395736	chr3	+	46394872	46395621	True	NM_001123396,NM_001123041,NM_001199149	chr3,chr3,chr3	+,+,-	CCR2,CCR2,LTF	24,24,109591
chr1:205408923-205409389	chr1	+	205408923	205409387	True	NM_002596,NR_029893	chr1,chr1	+,-	CDK18,MIR135B	64296,8189
chr6:101847316-101847580	chr6	+	101847317	101847509	True	NM_022091,NM_001166247,NM_021956,NM_175768	chr6,chr6,chr6,chr6	-,+,+,+	ASCC3,GRIK2,GRIK2,GRIK2	-518093,-507,-507,-507
chr17:36886771-36887513	chr17	+	36886831	36887472	True	NM_007144,NM_001136498	chr17,chr17	-,+	PCGF2,CISD3	17136,-372
chr6:135221025-135221604	chr6	+	135221213	135221589	True	NM_001193480,NM_005375	chr6,chr6	-,+	ALDH8A1,MYB	49721,280863
chrX:102612156-102613705	chrX	+	102612390	102613663	True	NM_016303,NM_001006612,NM_001006613,NM_001006614,NM_032621	chrX,chrX,chrX,chrX,chrX	+,+,+,+,-	WBP5,WBP5,WBP5,WBP5,BEX2	-1068,-1068,-1068,-1068,-46416
chr7:99755049-99755283	chr7	+	99755101	99755259	True	NM_018275,NM_001008395	chr7,chr7	-,+	C7orf43,C7orf59	1093,-8622
chr14:62192223-62192749	chr14	+	62192425	62192544	True	NM_001017970,NM_181054	chr14,chr14	-,+	TMEM30B,HIF1A	-443895,-30369
chr6:44057086-44057482	chr6	+	44057206	44057507	True	NM_018426,NM_032111	chr6,chr6	+,-	TMEM63B,MRPL14	37868,37735
chr8:23535218-23536759	chr8	+	23535618	23536790	True	NM_006167,NM_016612	chr8,chr8	-,+	NKX3-1,SLC25A37	3710,-149306
chr12:53442320-53442917	chr12	+	53442462	53442915	True	NM_198316,NM_170754,NM_015319,NR_033854	chr12,chr12,chr12,chr12	+,+,+,-	TENC1,TENC1,TENC1,LOC283335	-1703,919,10,5357
chr20:2359998-2360662	chr20	+	2360174	2360566	True	NR_003684,NM_198994	chr20,chr20	-,+	SNORD119,TGM6	83177,987
chr8:144450827-144451034	chr8	+	144450898	144450964	True	NR_026785,NM_052924	chr8,chr8	-,+	C8orf51,RHPN1	-93,60
chr11:64053368-64053613	chr11	+	64053368	64053624	True	NM_020155,NM_001177358,NM_001170880,NM_004322,NM_001170881,NM_001170726,NM_033310,NM_032989	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,-,+,+,+,-	GPR137,GPR137,GPR137,BAD,GPR137,GPR137,KCNK4,BAD	-31,-1136,-31,-1192,-1134,-1608,5168,-1192
chr13:28541418-28541738	chr13	+	28541441	28541575	True	NM_001265,NR_002162	chr13,chr13	-,+	CDX2,ATP5EP2	1792,-22149
chr22:32752413-32752870	chr22	+	32752520	32752830	True	NM_006604,NR_001450,NM_001098535	chr22,chr22,chr22	+,-,+	RFPL3,RFPL3S,RFPL3	-1702,14192,1023
chr4:99848729-99849381	chr4	+	99848905	99849345	True	NM_001130678,NM_001130679,NM_015143,NM_001968	chr4,chr4,chr4,chr4	-,-,+,-	EIF4E,EIF4E,METAP1,EIF4E	948,2491,67442,2491
chr1:13713743-13714386	chr1	+	13714007	13714202	True	NM_001099850,NM_001099851	chr1,chr1	-,+	PRAMEF18,PRAMEF17	-15602,1885
chr1:13713743-13714386	chr1	+	13493174	13493369	False	NM_001045480,NM_001099850	chr1,chr1	+,-	PRAMEF16,PRAMEF18	1884,-15605
chr10:29920626-29921138	chr10	+	29920781	29921123	True	NM_021738,NR_003930	chr10,chr10	-,+	SVIL,LOC387647	2832,-222331
chr19:48899072-48899622	chr19	+	48899192	48899432	True	NM_000836,NM_006801	chr19,chr19	+,-	GRIN2D,KDELR1	-1111,-4382
chr16:66401002-66402365	chr16	+	66401038	66402056	True	NM_001795,NM_001172643	chr16,chr16	+,-	CDH5,TK2	-564,182188
chr12:4918272-4918582	chr12	+	4918296	4918390	True	NM_006422,NM_002235	chr12,chr12	-,+	AKAP3,KCNA6	-163953,-5
chr10:11863508-11865207	chr10	+	11863950	11865125	True	NM_014688,NM_153256	chr10,chr10	-,+	USP6NL,C10orf47	-210271,271
chr4:109088165-109088557	chr4	+	109088253	109088437	True	NM_001130714,NM_001130713,NM_001166119,NM_016269,NR_029374,NR_029373	chr4,chr4,chr4,chr4,chr4,chr4	-,-,-,-,+,+	LEF1,LEF1,LEF1,LEF1,LOC641518,LOC641518	1725,1725,-300,1725,243,4838
chr3:129036062-129037101	chr3	+	129036119	129037099	True	NM_006026,NR_026991	chr3,chr3	-,+	H1FX,C3orf47	-999,-1056
chr12:122242447-122242695	chr12	+	122242541	122242741	True	NM_015048,NR_002809	chr12,chr12	+,-	SETD1B,LOC338799	-14,-1151
chr19:11073596-11073836	chr19	+	11073666	11073776	True	NM_001128844,NM_024029,NM_003072,NM_001128849	chr19,chr19,chr19,chr19	+,-,+,+	SMARCA4,YIPF2,SMARCA4,SMARCA4	-2119,-34309,-2119,-1909
chr11:55650179-55652112	chr11	+	55650419	55652127	True	NM_032681,NM_001001960	chr11,chr11	+,-	SPRYD5,OR5W2	11,29981
chr11:55650179-55652112	chr11	-	49861986	49862066	False	NM_001005270,NM_001001955	chr11,chr11	-,+	OR4C12,OR4C13	142085,111876
chr11:55650179-55652112	chr11	+	48966047	48966127	False	NM_001014986,NM_001005512	chr11,chr11	-,+	FOLH1,OR4A47	264175,-455783
chr11:55650179-55652112	chr11	-	49004361	49004441	False	NM_001014986,NM_001005512	chr11,chr11	-,+	FOLH1,OR4A47	225861,-494097
chr7:2283645-2283951	chr7	+	2283708	2283944	True	NM_198954,NM_002452,NM_198952,NM_198950,NM_013393,NM_198948,NM_198949,NM_198953	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,-,+,+,+	NUDT1,NUDT1,NUDT1,NUDT1,FTSJ2,NUDT1,NUDT1,NUDT1	-1219,-1902,-1863,-1863,-1875,-1902,-1902,-1219
chr16:2891391-2891983	chr16	+	2891398	2892022	True	NR_026864,NM_145252	chr16,chr16	-,+	PRSS30P,ZG16B	780,-11276
chr11:67209646-67210041	chr11	+	67209700	67210088	True	NM_020441,NM_145200,NM_001018070,NM_005608	chr11,chr11,chr11,chr11	-,+,-,-	CORO1B,CABP4,CORO1B,PTPRCAP	945,12729,1225,-4547
chr15:21003608-21003915	chr2	-	132417561	132417613	False	NM_214461,NM_013310	chr2,chr2	-,+	C2orf27B,C2orf27A	141671,62450
chr15:21003608-21003915	chr15	+	21003654	21003856	True	NR_027992,NR_027411	chr15,chr15	-,+	BCL8,GOLGA8C	-42174,-236031
chr15:21003608-21003915	chr15	+	22010337	22010539	False	NR_015416,NR_024387	chr15,chr15	+,-	LOC727924,CXADRP2	267492,6389
chr19:35451747-35453220	chr19	+	35451781	35453216	True	NR_024018,NM_175872	chr19,chr19	+,-	ZNF30,ZNF792	-34025,1789
chr6:117994802-117996167	chr6	+	117994942	117996082	True	NM_020399,NM_138459	chr6,chr6	-,+	GOPC,NUS1	-71237,534
chr7:108097750-108098878	chr7	+	108097756	108098868	True	NM_001193584,NM_005010,NM_012328,NM_001193583,NM_001193582	chr7,chr7,chr7,chr7,chr7	-,-,+,-,-	NRCAM,NRCAM,DNAJB9,NRCAM,NRCAM	-915,-915,111320,-915,-915
chr2:241082512-241083329	chr2	+	241082613	241083154	True	NM_001163424,NM_148961,NM_138336,NM_002081	chr2,chr2,chr2,chr2	-,-,-,+	MYEOV2,OTOS,MYEOV2,GPC1	-6866,-2540,-6849,291960
chr11:1873882-1874244	chr11	+	1873888	1874243	True	NM_002339,NR_036185	chr11,chr11	+,-	LSP1,MIR4298	-44,6573
chrX:53450029-53451603	chrX	+	53450061	53450730	True	NM_006306,NM_001031745,NM_144968	chrX,chrX,chrX	-,+,+	SMC1A,RIBC1,RIBC1	-443,-222,-273
chrX:110418163-110420056	chrX	+	110418204	110420000	True	NM_001128173,NM_014289	chrX,chrX	+,-	PAK3,CAPN6	-51957,93826
chr4:77379249-77379655	chr4	+	77379346	77379586	True	NM_001042784,NM_020859	chr4,chr4	-,+	CCDC158,SHROOM3	-50888,-23152
chr4:117521633-117522421	chr4	+	117521662	117522361	True	NM_152402,NR_031737	chr4,chr4	-,+	TRAM1L1,MIR1973	484426,-300841
chr1:32479760-32480010	chr1	+	32479891	32479967	True	NM_080391,NM_006559	chr1,chr1	-,+	PTP4A2,KHDRBS1	-75903,-451
chr17:33464116-33464334	chr17	+	33464131	33464353	True	NM_001014445,NM_001033576,NM_018096	chr17,chr17,chr17	-,+,-	NLE1,UNC45B,NLE1	5019,10482,5019
chr11:62367686-62368539	chr11	+	62367752	62368540	True	NM_004739,NM_022830,NM_000327	chr11,chr11,chr11	-,-,+	MTA2,TUT1,ROM1	813,-8643,11672
chr5:149886224-149887112	chr5	+	149886586	149887131	True	NM_001025070,NM_001543	chr5,chr5	-,+	RPS14,NDST1	-57267,542
chr20:38897194-38897849	chr20	+	38897196	38897638	True	NM_003286,NM_005461	chr20,chr20	+,-	TOP1,MAFB	759823,420294
chr15:41954139-41955826	chr15	+	41954193	41955313	True	NM_001080541,NM_015540,NM_001164273	chr15,chr15,chr15	+,-,+	MGA,RPAP1,MGA	-1634,-117729,-1634
chr7:99611409-99611746	chr7	+	99611408	99611471	True	NM_001185,NM_003439	chr7,chr7	-,+	AZGP1,ZKSCAN1	-37673,1747
chr1:27321412-27322212	chr1	+	27321639	27322046	True	NM_052943,NM_001013642	chr1,chr1	-,+	FAM46B,TRNP1	17338,-1495
chr7:37954389-37955164	chr7	+	37954501	37955201	True	NM_003014,NM_017549	chr7,chr7	-,+	SFRP4,EPDR1	1374,4961
chr20:34823297-34824048	chr20	+	34823627	34824081	True	NR_027451,NM_015511	chr20,chr20	-,+	LOC647979,C20orf4	-184745,365
chr2:71679957-71680567	chr2	+	71679959	71680543	True	NM_001130980,NM_001130981,NM_003494,NM_020459,NM_001130977,NM_001130976,NM_001130979,NM_001130978	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,-,+,+,+,+	DYSF,DYSF,DYSF,PAIP2B,DYSF,DYSF,DYSF,DYSF	209,209,209,-225726,209,209,209,209
chr12:42533905-42534745	chr12	+	42534137	42534794	True	NM_173601,NM_001099650,NM_201438	chr12,chr12,chr12	-,-,+	GXYLT1,GXYLT1,PPHLN1	3936,3936,185152
chr19:17958547-17958795	chr19	+	17958553	17958783	True	NR_001593,NM_000215	chr19,chr19	+,-	RPL18AP3,JAK3	11943,108
chr15:77712625-77713111	chr15	+	77712869	77713152	True	NM_018200,NM_024776	chr15,chr15	+,-	HMG20A,PEAK1	90,-135536
chr2:134303563-134304536	chr2	+	134303707	134304368	True	NM_207363,NR_037450	chr2,chr2	-,+	NCKAP5,MIR3679	21714,580327
chr7:65112413-65112652	chr7	+	65112537	65112613	True	NM_000181,NR_027392	chr7,chr7	-,+	GUSB,INTS4L2	334738,163
chr7:65112413-65112652	chr7	-	64974023	64974097	False	NM_152626,NM_000181	chr7,chr7	+,-	ZNF92,GUSB	-135306,473254
chr7:65112413-65112652	chr7	-	65019837	65019913	False	NM_000181,NR_027392	chr7,chr7	-,+	GUSB,INTS4L2	427438,92863
chr7:65112413-65112652	chr16	-	32822718	32823089	False	NR_003083,NM_016212	chr16,chr16	-,+	SLC6A10P,TP53TG3	73743,381890
chr5:180374131-180374649	chr5	+	180374130	180374666	True	NM_001159710,NM_152283	chr5,chr5	+,-	BTNL8,ZFP62	-37617,-85844
chr11:6636408-6637289	chr11	+	6636529	6637234	True	NM_001014795,NM_000391,NM_006284	chr11,chr11,chr11	+,-,-	ILK,TPP1,TAF10	-11373,3509,-3084
chr9:103113356-103114181	chr9	+	103113356	103114219	True	NM_001161584,NM_001198807,NM_017746	chr9,chr9,chr9	-,+,-	TEX10,C9orf30,TEX10	684,75275,1090
chr8:67836930-67837335	chr8	+	67836974	67837232	True	NR_002598,NR_002599,NM_001136160	chr8,chr8,chr8	-,-,+	SNORD87,SNHG6,C8orf45	-2190,597,-53288
chr1:148194261-148194745	chr7	-	55539775	55540077	False	NM_018697,NM_030796	chr7,chr7	+,-	LANCL2,VOPP1	-106687,100173
chr1:148194261-148194745	chr1	+	148194326	148194693	True	NM_001164262,NM_001170755,NM_001164261	chr1,chr1,chr1	-,+,-	PPIAL4F,NBPF15,PPIAL4D	7894,363494,7894
chr17:39114460-39114960	chr17	+	39114473	39114936	True	NM_033061,NM_213656	chr17,chr17	+,-	KRTAP4-7,KRT39	125522,8258
chr12:82152356-82152570	chr12	+	82152392	82152494	True	NM_032230,NM_003625	chr12,chr12	+,-	C12orf26,PPFIA2	599781,665
chr16:1922071-1922297	chr16	+	1922083	1922346	True	NM_152764,NM_001163560,NM_001142398	chr16,chr16,chr16	-,-,+	C16orf73,C16orf73,FAHD1	-7,70,-44909
chr16:75029561-75031187	chr16	+	75030354	75031109	True	NM_030581,NM_032268	chr16,chr16	-,+	WDR59,ZNRF1	-11337,1805
chr14:74082356-74083116	chr14	+	74082676	74083135	True	NM_001037162,NM_203309	chr14,chr14	+,-	ACOT6,HEATR4	412,-57025
chr7:73096206-73097198	chr7	+	73096310	73097187	True	NR_037776,NM_017528,NM_001202560,NM_032317	chr7,chr7,chr7,chr7	+,+,+,-	WBSCR22,WBSCR22,WBSCR22,DNAJC30	710,710,710,644
chr8:95233356-95233652	chr8	+	95233355	95233462	True	NM_001161778,NM_001144663	chr8,chr8	+,-	PDP1,CDH17	-303426,-3824
chr4:48486110-48486314	chr4	+	48486117	48486249	True	NM_175619,NM_152679,NM_003215	chr4,chr4,chr4	+,+,-	ZAR1,SLC10A4,TEC	6059,-808,-214303
chr16:67964333-67965077	chr16	+	67964406	67965096	True	NM_006742,NM_001907,NM_002801	chr16,chr16,chr16	+,-,-	PSKH1,CTRL,PSMB10	-37282,732,5734
chrX:153991811-153992165	chrX	+	153991871	153992141	True	NM_080612,NR_002969,NM_001363,NM_001142463	chrX,chrX,chrX,chrX	-,+,+,+	GAB3,SNORA36A,DKC1,DKC1	-12523,4661,-895,-895
chr6:37788244-37789700	chr6	+	37788297	37789545	True	NM_153487,NM_021943	chr6,chr6	-,+	MDGA1,ZFAND3	-122531,-1041
chr1:161634783-161636479	chr1	+	161634933	161636261	True	NM_004001,NM_001002273,NM_001190828,NM_001002274,NM_001002275,NR_002595	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-	FCGR2B,FCGR2B,FCGR2B,FCGR2B,FCGR2B,RPL31P11	-2087,-2087,-2087,-2087,-2087,18831
chr1:161634783-161636479	chr1	+	161553341	161554457	False	NM_201563,NM_001127596	chr1,chr1	+,-	FCGR2C,FCGR3A	-2265,-32928
chr19:45310717-45311096	chr19	+	45310792	45310858	True	NM_001013257,NM_005581,NR_027754	chr19,chr19,chr19	+,+,-	BCAM,BCAM,CEACAM22P	1479,1479,-250642
chr19:7553610-7553810	chr19	+	7553669	7553815	True	NM_080662,NM_198534	chr19,chr19	-,+	PEX11G,C19orf45	140,8629
chr17:27170715-27171530	chr17	+	27170758	27171330	True	NM_018182,NM_001077498,NM_005702	chr17,chr17,chr17	-,-,+	C17orf63,C17orf63,ERAL1	-917,-917,10712
chr16:30904224-30904879	chr16	+	30904396	30904738	True	NM_001330,NM_004765,NR_031576,NM_001142544	chr16,chr16,chr16,chr16	+,-,+,+	CTF1,BCL7C,MIR762,CTF1	3189,711,485,3189
chr6:123105765-123106702	chr6	+	123105927	123106465	True	NM_006714,NM_001446,NM_020755	chr6,chr6,chr6	+,+,-	SMPDL3A,FABP7,SERINC1	3505,-5342,-312975
chr17:55166192-55166958	chr17	+	55166195	55166973	True	NM_004645,NM_003488	chr17,chr17	-,+	COIL,AKAP1	-127784,-3694
chr2:113762781-113763755	chr2	+	113762842	113763774	True	NM_014440,NM_014438	chr2,chr2	+,-	IL1F6,IL1F8	8,46716
chr14:25075941-25076361	chr14	+	25075969	25076385	True	NM_033423,NM_015299	chr14,chr14	-,+	GZMH,KHNYN	2529,-176879
chr19:56092925-56093848	chr19	+	56093173	56093723	True	NM_153219,NM_152600	chr19,chr19	+,-	ZNF524,ZNF579	18006,-962
chr16:30455587-30455803	chr16	+	30455618	30455826	True	NM_001114380,NM_012248	chr16,chr16	+,-	ITGAL,SEPHS2	28156,1448
chrX:102965249-102965496	chrX	+	102965255	102965539	True	NM_001024452,NM_182541	chrX,chrX	-,+	GLRA4,TMEM31	18063,297
chr1:159765666-159767580	chr1	+	159765981	159767388	True	NM_001134233,NM_001004310	chr1,chr1	-,+	C1orf204,FCRL6	57799,4784
chr2:37194179-37196076	chr2	+	37194342	37196091	True	NM_174931,NM_003162	chr2,chr2	+,-	CCDC75,STRN	115502,-727
chr17:48448444-48449116	chr17	+	48448625	48449152	True	NM_152463,NM_001166131,NM_016504	chr17,chr17,chr17	+,+,-	EME1,EME1,MRPL27	1428,1428,1461
chr2:206951233-206951769	chr2	+	206951323	206951704	True	NM_001037663,NM_017759	chr2,chr2	+,-	EEF1B2,INO80D	72613,-417
chr11:56258786-56259733	chr11	+	56258816	56259669	True	NM_001005282,NM_001013356	chr11,chr11	-,+	OR5M8,OR8U8	30,-115768
chr14:75987335-75989009	chr14	+	75987407	75988773	True	NM_006399,NM_007176	chr14,chr14	+,-	BATF,C14orf1	10,138815
chr7:53070980-53071619	chr7	+	53071120	53071540	True	NM_182595,NR_004422	chr7,chr7	+,-	POM121L12,HPVC1	31808,1198624
chr15:90648965-90650048	chr15	+	90649804	90650034	True	NM_002168,NM_020210	chr15,chr15	-,+	IDH2,SEMA4B	-4096,78117
chr9:132389752-132390166	chr9	+	132389775	132390191	True	NM_199350,NM_014064	chr9,chr9	-,+	C9orf50,METTL11A	-6720,-1399
chr7:95952028-95952721	chr7	+	95952084	95952455	True	NR_027662,NM_004411,NM_014251,NM_001160210	chr7,chr7,chr7,chr7	-,+,-,-	SLC25A13,DYNC1I1,SLC25A13,SLC25A13	-625,-550327,-625,-625
chr22:47134743-47135639	chr22	+	47134880	47135513	True	NM_022766,NM_014346	chr22,chr22	-,+	CERK,TBC1D22A	-728,23004
chr17:61994842-61995317	chr17	+	61995028	61995214	True	NM_001318,NM_022579,NM_022581,NM_000515,NM_022560,NM_022561,NM_022562,NM_022580,NR_002947,NM_022559	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,-,-,-,+,-	CSHL1,CSHL1,CSHL1,GH1,GH1,GH1,GH1,CSHL1,TCAM1P,GH1	-6410,-6410,-6410,1034,1034,1034,1034,-6410,-60703,1034
chr4:153457184-153457725	chr4	+	153457253	153457767	True	NM_033632,NR_033797	chr4,chr4	-,+	FBXW7,DKFZP434I0714	-1081,112
chr7:100059332-100059927	chr7	+	100059623	100059782	True	NM_001004323,NM_173564	chr7,chr7	-,+	C7orf61,C7orf51	2163,21767
chr1:12565904-12566180	chr1	+	12565962	12566226	True	NR_003025,NM_004753,NR_003022	chr1,chr1,chr1	+,-,+	SNORA59A,DHRS3,SNORA59B	1073,111644,1073
chr1:39345794-39346308	chr1	+	39346120	39346182	True	NR_037633,NR_037632,NR_037637,NR_037636,NR_037635,NR_037634,NM_012333,NM_030772,NM_001136275	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,-,-,-,+	GJA9-MYCBP,MYCBP,GJA9-MYCBP,GJA9-MYCBP,GJA9-MYCBP,GJA9-MYCBP,MYCBP,GJA9,AKIRIN1	1166,-7070,1166,1166,1166,1166,-7070,1166,110733
chr4:113197519-113199088	chr4	+	113197641	113199086	True	NM_001102406,NM_052864	chr4,chr4	+,-	ALPK1,TIFA	19412,8023
chr1:79471982-79472400	chr1	+	79471992	79472356	True	NM_022159,NM_006417	chr1,chr1	-,+	ELTD1,IFI44	189,-356566
chr11:77348871-77349739	chr11	+	77348870	77349399	True	NM_173039,NM_001293	chr11,chr11	+,-	AQP11,CLNS1A	-48241,-19
chr17:80170498-80170711	chr17	+	80170652	80170760	True	NM_001042422,NM_198082	chr17,chr17	+,-	SLC16A3,CCDC57	15532,3
chr9:75138803-75139840	chr9	+	75138888	75139853	True	NM_138691,NM_006007	chr9,chr9	+,-	TMC1,ZFAND5	-2232,-158725
chr12:120639856-120640715	chr12	+	120639958	120640718	True	NM_053275,NM_012240,NM_006836,NM_001002	chr12,chr12,chr12,chr12	-,+,-,-	RPLP0,SIRT4,GCN1L1,RPLP0	-944,99405,-7445,-944
chr19:55106739-55106998	chr19	+	55106764	55106902	True	NM_006863,NM_145057	chr19,chr19	+,-	LILRA1,CDC42EP5	-1702,-122342
chr19:55106739-55106998	chr19	+	55086397	55086453	False	NM_001130917,NM_006866,NM_145057	chr19,chr19,chr19	+,+,-	LILRA2,LILRA2,CDC42EP5	-1191,-1191,-101975
chr19:55106739-55106998	chr19	+	55143647	55143723	False	NM_001081639,NM_001081638,NM_001081637,NM_145057	chr19,chr19,chr19,chr19	+,+,+,-	LILRB1,LILRB1,LILRB1,CDC42EP5	-1790,-1790,-1730,-159225
chr22:25003457-25003658	chr22	+	25003494	25003648	True	NM_005265,NM_207644,NM_001032365,NM_001032364	chr22,chr22,chr22,chr22	+,-,+,+	GGT1,C22orf36,GGT1,GGT1	-4365,-14459,-23,-4421
chr17:47923932-47924391	chr17	+	47923933	47924431	True	NM_001077504,NM_001077505,NM_001077506,NM_007067,NM_001077503,NM_170685	chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,+,-,-	TAC4,TAC4,TAC4,MYST2,TAC4,TAC4	998,998,998,-58003,998,998
chr15:42788085-42788634	chr15	+	42788115	42788515	True	NM_003825,NM_022473,NM_130798	chr15,chr15,chr15	+,-,+	SNAP23,ZFP106,SNAP23	-331,-38385,-331
chr22:46448698-46448944	chr22	+	46448799	46448967	True	NM_018280,NR_027034,NR_027036	chr22,chr22,chr22	-,+,-	C22orf26,LOC150381,LOC100271722	1107,758,-8051
chr17:2304104-2304314	chr17	+	2304114	2304362	True	NM_020310,NM_001098509	chr17,chr17	-,+	MNT,SGSM2	6,-63357
chr13:41240605-41240811	chr13	+	41240612	41240788	True	NM_002015,NM_014252	chr13,chr13	-,+	FOXO1,SLC25A15	-2,122758
chr9:130852769-130853591	chr9	+	130853100	130853550	True	NM_197956,NM_001006643,NM_052901,NM_001006642	chr9,chr9,chr9,chr9	-,+,+,+	NAIF1,SLC25A25,SLC25A25,SLC25A25	-23501,7285,7266,577
chr12:19243110-19244298	chr12	+	19243393	19243939	True	NM_033123,NM_001190860	chr12,chr12	-,+	PLCZ1,PLEKHA5	-352475,38686
chr7:148392894-148394798	chr7	+	148392955	148394736	True	NM_003592,NM_001203249	chr7,chr7	+,-	CUL1,EZH2	1196,185915
chr14:77968375-77969840	chr14	+	77968567	77969818	True	NM_182509,NM_012111,NM_199296	chr14,chr14,chr14	-,+,-	ISM2,AHSA1,ISM2	-3357,-44252,-3357
chr3:135913647-135913887	chr3	+	135913654	135913874	True	NM_000532,NM_001145417,NM_018133	chr3,chr3,chr3	+,-,-	PCCB,MSL2,MSL2	55292,-344,864
chr19:42382175-42382601	chr19	+	42382411	42382569	True	NM_198977,NM_001783,NM_021601,NM_004706,NM_199002,NM_173506	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,-	ARHGEF1,CD79A,CD79A,ARHGEF1,ARHGEF1,LYPD4	4697,-1272,-1272,4697,5876,-33903
chr20:43029830-43030361	chr20	+	43029858	43030378	True	NM_178850,NR_037419,NM_000457,NM_001080472,NM_178849	chr20,chr20,chr20,chr20,chr20	+,+,+,-,+	HNF4A,MIR3646,HNF4A,FITM2,HNF4A	15,6381,15,-89969,15
chr13:33001059-33001273	chr13	+	33001121	33001321	True	NM_000059,NM_052818,NM_001079691	chr13,chr13,chr13	+,-,-	BRCA2,N4BP2L1,N4BP2L1	-111555,1044,1044
chr15:21006169-21006394	chr15	+	21006173	21006377	True	NR_027992,NR_027411	chr15,chr15	-,+	BCL8,GOLGA8C	-44693,-238550
chr15:21006169-21006394	chr15	+	22012856	22013060	False	NR_015416,NR_024387	chr15,chr15	+,-	LOC727924,CXADRP2	264971,3868
chrY:251996-252228	chrY	+	252006	252194	True	NR_027232,NM_013239	chrY,chrY	+,-	NCRNA00107,PPP2R3B	-20672,45546
chrY:251996-252228	chrX	+	302006	302194	False	NR_027232,NM_013239	chrX,chrX	+,-	NCRNA00107,PPP2R3B	-20672,45546
chr4:7757747-7758018	chr4	+	7757768	7758044	True	NM_001134647,NR_026892	chr4,chr4	-,+	AFAP1,AFAP1-AS1	183659,-2010
chr7:111130209-111130492	chr7	+	111130463	111130526	True	NM_032549,NM_018334	chr7,chr7	-,+	IMMP2L,LRRN3	71871,-399452
chr9:112551072-112551329	chr9	+	112551225	112551355	True	NM_053016,NM_007203,NM_002829,NM_147150	chr9,chr9,chr9,chr9	+,+,-,+	PALM2,PALM2-AKAP2,PTPN3,PALM2-AKAP2	-8709,-8709,-290632,-8709
chr14:67981086-67981431	chr14	+	67981110	67981464	True	NM_020715,NM_182526	chr14,chr14	+,-	PLEKHH1,TMEM229B	18543,607
chr6:38581117-38582406	chr6	+	38581528	38582406	True	NM_152733,NM_001371	chr6,chr6	-,+	BTBD9,DNAH8	-17685,108145
chr16:31098998-31100136	chr16	+	31099021	31099911	True	NM_024006,NM_001039503,NM_014699,NM_206824	chr16,chr16,chr16,chr16	-,-,+,-	VKORC1,PRSS53,ZNF646,VKORC1	6415,269,-13329,6415
chr16:607928-608173	chr16	+	608008	608214	True	NM_176677,NM_145270,NR_024121	chr16,chr16,chr16	+,+,-	NHLRC4,C16orf11,NCRNA00235	8817,2207,-30601
chr12:27403854-27405003	chr12	+	27404308	27404925	True	NM_001080406,NM_015000	chr12,chr12	-,+	C12orf71,STK38L	-168853,-7282
chr11:33914389-33914644	chr11	+	33914394	33914672	True	NM_203364,NM_005574	chr11,chr11	+,-	CAPRIN1,LMO2	158557,-558
chr11:114426421-114427909	chr11	+	114426727	114427348	True	NM_015523,NM_152315	chr11,chr11	+,-	REXO2,FAM55A	-116673,3282
chr15:63793708-63794521	chr15	+	63793799	63794477	True	NR_034080,NM_006537	chr15,chr15	-,+	LOC100130855,USP3	98601,2332
chr15:42118439-42119537	chr15	+	42118475	42119085	True	NR_036195,NM_001198588,NM_001114632,NM_005090	chr15,chr15,chr15,chr15	-,+,+,+	MIR4310,JMJD7-PLA2G4B,JMJD7,JMJD7-PLA2G4B	39714,1197,1197,1197
chrX:118830528-118831069	chrX	+	118830641	118831023	True	NM_145802,NM_145799,NM_145800,NM_001105576,NM_015129	chrX,chrX,chrX,chrX,chrX	-,-,-,+,-	SEPT6,SEPT6,SEPT6,ANKRD58,SEPT6	-3308,-3308,-3308,61552,-3308
chr7:53790582-53791619	chr7	+	53790958	53791587	True	NM_182595,NR_004422	chr7,chr7	+,-	POM121L12,HPVC1	-687660,478578
chr1:32572829-32573058	chr1	+	32573008	32573072	True	NM_012316,NM_019118	chr1,chr1	+,-	KPNA6,TMEM234	571,114904
chr11:101000162-101000616	chr11	+	101000187	101000661	True	NM_032021,NM_001202474,NM_000926	chr11,chr11,chr11	+,-,-	TMEM133,PGR,PGR	-137427,-393,-67
chr2:103057622-103058067	chr2	+	103057679	103058036	True	NM_003853,NM_032718	chr2,chr2	+,-	IL18RAP,MFSD9	-22476,295362
chr3:52707162-52708906	chr3	+	52707293	52708950	True	NM_014366,NM_018165,NM_181042	chr3,chr3,chr3	+,-,-	GNL3,PBRM1,PBRM1	10985,4839,4839
chr14:20883742-20885344	chr14	+	20883964	20885142	True	NM_007110,NM_001641	chr14,chr14	-,+	TEP1,APEX1	-2385,38147
chr10:58121069-58121460	chr10	+	58121089	58121499	True	NM_001005413,NM_001190478,NM_007057,NM_032997	chr10,chr10,chr10,chr10	-,+,-,-	ZWINT,MTRNR2L5,ZWINT,ZWINT	-55,-762390,-55,-55
chr2:109745345-109745580	chr2	+	109745349	109745513	True	NR_029193,NM_001099289	chr2,chr2	-,+	LOC100287216,SH3RF3	1112,483
chr19:13987401-13987798	chr19	+	13987434	13987631	True	NM_001098622,NR_030179,NR_029613,NM_024323	chr19,chr19,chr19,chr19	+,+,+,-	NANOS3,MIR181D,MIR181C,C19orf57	318,-1796,-1972,29329
chrX:70476723-70477077	chrX	+	70476815	70476999	True	NM_001171163,NM_001171162,NM_001145408,NM_201599,NM_005096	chrX,chrX,chrX,chrX,chrX	-,-,+,-,-	ZMYM3,ZMYM3,NONO,ZMYM3,ZMYM3	-2316,-1768,26042,-2777,-2316
chr20:17536220-17536867	chr20	+	17536498	17536691	True	NM_001011546,NM_001161705	chr20,chr20	+,-	DSTN,BFSP1	13907,2973
chr3:184431457-184433334	chr3	+	184431456	184433267	True	NM_001009921,NM_022149	chr3,chr3	+,-	VPS8,MAGEF1	96663,-1620
chr3:29326468-29326717	chr3	+	29326480	29326720	True	NM_014483,NM_001003793,NM_001003792,NM_001177712,NM_001134433,NM_001177711	chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,-,+	RBMS3,RBMS3,RBMS3,RBMS3,AZI2,RBMS3	-3735,-3735,-3735,-3735,-935862,-3735
chr17:7472921-7473143	chr17	+	7472936	7473186	True	NM_001416,NR_002918,NR_037926,NR_002912,NR_002604,NM_001251,NM_015670,NM_001204510,NM_006942,NM_001040059	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,+,+,+,-,+	EIF4A1,SNORA48,SENP3-EIF4A1,SNORA67,SNORD10,CD68,SENP3,EIF4A1,SOX15,CD68	2837,4844,-7678,8086,6942,9618,-7678,2837,20354,9619
chr7:6490005-6490419	chr7	+	6490149	6490369	True	NM_001142936,NM_018890,NM_139179	chr7,chr7,chr7	-,+,-	DAGLB,RAC1,DAGLB	-2506,-76075,-2506
chr7:6490005-6490419	chr7	+	6489434	6489518	False	NM_001142936,NM_018890,NM_139179	chr7,chr7,chr7	-,+,-	DAGLB,RAC1,DAGLB	-1791,-75360,-1791
chr1:235288823-235289587	chr1	+	235288853	235289020	True	NM_001037277,NR_002956,NM_014765	chr1,chr1,chr1	+,-,-	GGPS1,SNORA14B,TOMM20	202732,2284,3288
chr12:42983758-42984086	chr12	+	42983814	42984109	True	NM_016488,NM_153026	chr12,chr12	+,-	PPHLN1,PRICKLE1	-263918,-242
chr1:159895354-159895706	chr1	+	159895411	159895643	True	NM_003564,NM_020125	chr1,chr1	-,+	TAGLN2,SLAMF8	-127,-98983
chr17:80605624-80605871	chr17	+	80605637	80605794	True	NM_019613,NM_024619	chr17,chr17	-,+	WDR45L,FN3KRP	667,68787
chr3:47622620-47623137	chr3	+	47622639	47623135	True	NM_006574,NM_015466	chr3,chr3	-,+	CSPG5,PTPN23	-2280,-200207
chr1:200859404-200859906	chr1	+	200859665	200859883	True	NM_001142569,NM_018265,NM_017596	chr1,chr1,chr1	+,+,-	C1orf106,C1orf106,KIF21B	4115,755,132995
chr1:861609-862295	chr1	+	861651	862195	True	NM_152486,NR_026874	chr1,chr1	+,-	SAMD11,FLJ39609	-581,-6834
chr3:187462511-187462792	chr3	+	187462585	187462701	True	NM_001134738,NM_001130845,NM_001706,NR_034062	chr3,chr3,chr3,chr3	-,-,-,+	BCL6,BCL6,BCL6,LOC100131635	-9890,-8300,862,-42482
chr13:78116458-78117061	chr13	+	78116591	78117081	True	NM_003843,NM_144777,NR_037438,NM_001160706	chr13,chr13,chr13,chr13	+,+,-,+	SCEL,SCEL,MIR3665,SCEL	-6838,-6838,155220,-6838
chr5:7395176-7395393	chr5	+	7395245	7395411	True	NR_033906,NM_020546	chr5,chr5	-,+	LOC442132,ADCY2	-88418,931
chr11:22849752-22850864	chr11	+	22849803	22850873	True	NM_005256,NM_148893	chr11,chr11	+,-	GAS2,SVIP	-153535,559
chr22:37883786-37884180	chr22	+	37883818	37883944	True	NM_001166343,NM_152243,NR_029413,NM_002405	chr22,chr22,chr22,chr22	-,+,-,-	MFNG,CDC42EP1,MFNG,MFNG	-1393,72526,-1340,-1340
chr1:153312071-153312909	chr1	+	153312270	153312894	True	NM_020393,NM_002965	chr1,chr1	-,+	PGLYRP4,S100A9	8178,17435
chr15:30337378-30337640	chr17	+	76167924	76167974	False	NM_003258,NM_004710	chr17,chr17	-,+	TK1,SYNGR2	15361,-3304
chr15:30337378-30337640	chr15	+	30337405	30337647	True	NR_026859,NM_175610	chr15,chr15	+,-	FAM7A3,TJP1	58287,-222699
chr17:45401437-45401700	chr17	+	45401626	45401700	True	NM_001195192,NM_001256,NM_152347	chr17,chr17,chr17	+,-,+	C17orf57,CDC27,C17orf57	-350,-134961,-350
chr6:110299613-110300306	chr6	+	110299854	110300350	True	NM_001024934,NM_005284	chr6,chr6	-,+	WASF1,GPR6	200907,-53
chr22:42540390-42540828	chr22	+	42540543	42540837	True	NR_002570,NR_034118	chr22,chr22	-,+	CYP2D7P1,LOC100132273	0,-53657
chr22:42540390-42540828	chr22	+	42526871	42526921	False	NM_001025161,NM_000106,NR_034118	chr22,chr22,chr22	-,-,+	CYP2D6,CYP2D6,LOC100132273	12,12,-39985
chr16:31165237-31165537	chr16	+	31165298	31165380	True	NM_173502,NM_001170634	chr16,chr16	-,+	PRSS36,FUS	-3883,26050
chr6:159589021-159589595	chr6	+	159589075	159589635	True	NM_032532,NM_138810	chr6,chr6	+,-	FNDC1,TAGAP	793,-122891
chr19:57677969-57678653	chr19	+	57677995	57678626	True	NM_001012729,NM_003417	chr19,chr19	-,+	DUXA,ZNF264	291,24241
chr1:228136501-228136941	chr1	+	228136514	228136990	True	NM_033131,NM_003395	chr1,chr1	+,-	WNT3A,WNT9A	57732,-838
chrX:117482292-117483611	chrX	+	117482310	117483161	True	NM_019045,NM_001168301,NM_001184966,NM_001184965	chrX,chrX,chrX,chrX	+,-,+,+	WDR44,KLHL13,WDR44,WDR44	-2338,-231007,-2338,-2338
chrX:118986952-118987216	chrX	+	118987043	118987257	True	NM_004541,NM_080632,NM_023010	chrX,chrX,chrX	+,-,-	NDUFA1,UPF3B,UPF3B	18476,-52,-52
chr4:184021300-184022393	chr4	+	184021388	184022243	True	NR_024008,NM_024949	chr4,chr4	-,+	C4orf38,WWC2	-1036,-976
chr9:5833075-5833498	chr9	+	5833111	5833545	True	NM_024896,NM_005511	chr9,chr9	-,+	ERMP1,MLANA	-30,57363
chr11:13031303-13031535	chr11	+	13031385	13031539	True	NM_001080521,NM_032320	chr11,chr11	+,-	RASSF10,BTBD10	-466,453349
chr12:118498962-118499282	chr12	+	118498962	118499022	True	NM_018639,NM_181578	chr12,chr12	-,+	WSB2,RFC5	-11,-44505
chr1:110082790-110083915	chr1	+	110082831	110083797	True	NM_006496,NM_031936,NM_020703	chr1,chr1,chr1	+,+,-	GNAI3,GPR61,AMIGO1	7388,-388,-30495
chr2:80530050-80530324	chr2	+	80530132	80530366	True	NM_004389,NM_178839	chr2,chr2	+,-	CTNNA2,LRRTM1	-790123,1171
chr13:43568717-43569526	chr13	+	43568789	43569309	True	NM_001002264,NM_013238,NM_033255	chr13,chr13,chr13	-,+,-	EPSTI1,DNAJC15,EPSTI1	-2412,28052,-2412
chr6:52546655-52548027	chr6	+	52546659	52547944	True	NM_014051,NR_033760	chr6,chr6	+,-	TMEM14A,GSTA7P	-10827,62063
chr10:46170521-46170953	chr10	+	46170524	46171002	True	NM_174890,NM_001169106,NM_001128324	chr10,chr10,chr10	-,+,-	ANUBL1,FAM21C,ANUBL1	-2273,51645,-2273
chr15:76349811-76351319	chr15	+	76350013	76351337	True	NM_152335,NM_138573	chr15,chr15	+,-	C15orf27,NRG4	961,-45228
chr19:7031858-7032448	chr19	+	7031974	7032490	True	NM_001164419,NM_001136507	chr19,chr19	-,+	MBD3L4,MBD3L5	7744,-1431
chr19:7031858-7032448	chr19	-	7019574	7020085	False	NR_024372,NM_001136507	chr19,chr19	-,+	FLJ25758,MBD3L5	-13148,10508
chr19:7031858-7032448	chr19	-	7038286	7038802	False	NM_001164419,NM_001136507	chr19,chr19	-,+	MBD3L4,MBD3L5	1432,-7743
chr19:7031858-7032448	chr19	-	7056747	7057263	False	NM_001164425,NM_144614	chr19,chr19	-,+	MBD3L3,MBD3L2	1432,-7447
chr19:7031858-7032448	chr19	+	7050707	7051218	False	NM_144614,NM_001164425	chr19,chr19	+,-	MBD3L2,MBD3L3	-1407,7477
chr16:77463977-77464883	chr16	+	77464259	77464913	True	NM_001129979,NM_199355	chr16,chr16	+,-	SYCE1L,ADAMTS18	-230961,4148
chr17:29234791-29235146	chr17	+	29234962	29235156	True	NM_024683,NM_018404	chr17,chr17	-,+	C17orf42,ADAP2	-1676,13597
chr4:48493304-48493634	chr4	+	48493367	48493661	True	NM_175619,NM_152679,NM_003215	chr4,chr4,chr4	+,+,-	ZAR1,SLC10A4,TEC	-1109,-8058,-221553
chr3:97202785-97204271	chr3	+	97202797	97204290	True	NM_001042533,NM_173655	chr3,chr3	-,+	MINA,EPHA6	486987,-44367
chr14:75643328-75643684	chr14	+	75643373	75643635	True	NM_006827,NM_005252	chr14,chr14	-,+	TMED10,FOS	-24,101845
chr8:26435324-26435713	chr8	+	26435330	26435667	True	NM_001386,NM_007257	chr8,chr8	+,-	DPYSL2,PNMA2	24,-63847
chr1:24647894-24648211	chr1	+	24647922	24648184	True	NM_198173,NM_021180,NM_001195010,NM_001199013,NM_198174	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	GRHL3,GRHL3,GRHL3,C1orf201,GRHL3	-2161,1345,-1917,92128,-2161
chr7:100472427-100472710	chr7	+	100472575	100472645	True	NM_001015072,NM_003302,NM_001128853,NM_001128852,NM_015908,NM_001128854	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,+,+	UFSP1,TRIP6,SRRT,SRRT,SRRT,SRRT	14744,-7676,55,55,55,55
chr17:7381671-7382282	chr17	+	7381730	7382262	True	NM_000937,NM_020899,NM_001128833,NM_001102614	chr17,chr17,chr17,chr17	+,-,-,+	POLR2A,ZBTB4,ZBTB4,AMAC1L3	5435,5356,732,2458
chr4:111542378-111542589	chr4	+	111542422	111542590	True	NM_001977,NM_000325	chr4,chr4	+,-	ENPEP,PITX2	-145244,1714
chr20:34543935-34545145	chr20	+	34544008	34545172	True	NM_033630,NM_080834,NM_016558	chr20,chr20,chr20	-,+,-	SCAND1,C20orf152,SCAND1	-1460,11356,-727
chr8:38012783-38013752	chr8	+	38013111	38013801	True	NM_001204878,NM_000349	chr8,chr8	+,-	BAG4,STAR	20304,-4511
chr17:48942648-48942905	chr17	+	48942659	48942814	True	NM_005749,NM_175575	chr17,chr17	-,+	TOB1,WFIKKN2	-1246,-30105
chr6:165487087-165487901	chr6	+	165487121	165487922	True	NM_144980,NR_027284	chr6,chr6	-,+	C6orf118,LOC441177	235239,913116
chr19:57742019-57742253	chr19	+	57742025	57742197	True	NM_001012729,NM_001145078,NM_001023563,NM_001015878,NM_001015879,NM_003160	chr19,chr19,chr19,chr19,chr19,chr19	-,+,+,+,+,+	DUXA,ZNF805,ZNF805,AURKC,AURKC,AURKC	-63169,9855,9855,230,179,179
chr8:142375838-142376263	chr8	+	142375961	142376210	True	NR_024441,NM_005293	chr8,chr8	+,-	LOC731779,GPR20	-25364,1212
chr7:100888944-100889924	chr7	+	100889066	100889558	True	NM_016068,NM_006349,NM_014343,NM_001185080	chr7,chr7,chr7,chr7	-,+,-,-	FIS1,ZNHIT1,CLDN15,CLDN15	-695,-28132,-7839,-6965
chr11:95019730-95020432	chr11	+	95019766	95020330	True	NM_144665,NM_015036	chr11,chr11	-,+	SESN3,ENDOD1	-55520,-196851
chr16:81042237-81043775	chr16	+	81042247	81043509	True	NM_020188,NM_001100624,NM_018455,NM_001100625	chr16,chr16,chr16,chr16	-,+,+,+	C16orf61,CENPN,CENPN,CENPN	-1745,-2195,-2195,-2195
chr9:136225149-136225432	chr9	+	136225314	136225450	True	NR_000017,NR_002447,NM_003172,NM_017503,NR_002448,NR_000016	chr9,chr9,chr9,chr9,chr9,chr9	+,+,-,+,+,+	SNORD36B,SNORD24,SURF1,SURF2,SNORD36A,SNORD36C	-8420,-9118,-1953,-1948,-8058,-7668
chr7:31604623-31604825	chr7	+	31604703	31604816	True	NM_194300,NM_022728	chr7,chr7	+,-	CCDC129,NEUROD6	-47776,-224165
chr12:64782166-64783086	chr12	+	64782656	64783063	True	NM_007235,NM_001170633,NM_001099676	chr12,chr12,chr12	+,-,-	XPOT,C12orf56,C12orf56	15089,1332,1332
chr15:79382822-79383072	chr15	+	79382967	79383031	True	NM_001145648,NR_029705,NM_002891	chr15,chr15,chr15	-,+,-	RASGRF1,MIR184,RASGRF1	234,119098,234
chr5:140624120-140625016	chr5	+	140624473	140625059	True	NM_018935,NR_001282,NM_031947	chr5,chr5,chr5	+,+,-	PCDHB15,PCDHB19P,SLC25A2	87,-4847,58603
chr7:39070169-39070541	chr7	+	39070170	39070454	True	NM_007252,NM_080631	chr7,chr7	+,-	POU6F2,VPS41	-52619,-121370
chr17:40574196-40574500	chr17	+	40574275	40574401	True	NM_001130020,NM_012232	chr17,chr17	+,-	ATP6V0A1,PTRF	36460,987
chr7:150721442-150722333	chr7	+	150721522	150722050	True	NM_173681,NM_007188	chr7,chr7	-,+	ATG9B,ABCB8	-16,3459
chr10:120789963-120790196	chr10	+	120789962	120790132	True	NR_002917,NM_199461	chr10,chr10	-,+	SNORA19,NANOS1	29568,-785
chr1:146675282-146676485	chr1	+	146675492	146676404	True	NR_002305,NM_001144829	chr1,chr1	+,-	PDIA3P,FMO5	-26113,20876
chr14:74004918-74005171	chr14	+	74004974	74005052	True	NM_203309,NM_001037161	chr14,chr14	-,+	HEATR4,ACOT1	20649,-1097
chr14:74004918-74005171	chr14	+	74036930	74036993	False	NM_203309,NM_006821	chr14,chr14	-,+	HEATR4,ACOT2	-11279,-1209
chr19:50093329-50093663	chr19	+	50093522	50093684	True	NM_000951,NM_015953,NM_020719	chr19,chr19,chr19	+,-,+	PRRG2,NOSIP,PRR12	-8986,-9719,1227
chr1:182993387-182994414	chr1	+	182993440	182994455	True	NM_030933,NM_002293	chr1,chr1	-,+	SHCBP1L,LAMC1	-70887,-896
chr10:64575707-64576029	chr10	+	64575715	64576073	True	NM_001136179,NM_001136178,NM_032804,NM_001136177,NM_000399	chr10,chr10,chr10,chr10,chr10	-,-,+,-,-	EGR2,EGR2,ADO,EGR2,EGR2	103,2904,-11250,103,103
chr11:36396707-36397566	chr11	+	36396883	36397475	True	NM_024841,NM_001160168,NM_014186	chr11,chr11,chr11	+,+,-	PRR5L,PRR5L,COMMD9	59,59,-85884
chr7:150722975-150723951	chr7	+	150723170	150723930	True	NM_173681,NM_007188	chr7,chr7	-,+	ATG9B,ABCB8	-1584,1579
chr7:137687085-137688306	chr7	+	137687174	137688003	True	NM_194071,NM_001190906	chr7,chr7	-,+	CREB3L2,AKR1D1	-328,73174
chr1:151959769-151960297	chr1	+	151959831	151960350	True	NR_024237,NM_002966	chr1,chr1	+,-	LOC100132111,S100A10	-148950,6423
chr2:71247063-71247538	chr2	+	71247062	71247206	True	NR_002185,NM_144582	chr2,chr2	+,-	OR7E91P,TEX261	3998,-25061
chrX:30672762-30674331	chrX	+	30673216	30674375	True	NM_203391,NM_000167,NM_001205019,NM_025159,NM_001128127	chrX,chrX,chrX,chrX,chrX	+,+,+,-,+	GK,GK,GK,CXorf21,GK	-1791,-1791,-1791,-77183,-1791
chr5:35990880-35991206	chr5	+	35990889	35991193	True	NM_002185,NM_001171873,NM_152404	chr5,chr5,chr5	+,-,-	IL7R,UGT3A1,UGT3A1	-133949,9987,392
chr2:162597740-162599318	chr2	+	162597928	162599286	True	NM_001935,NM_022058	chr2,chr2	-,+	DPP4,SLC4A10	331816,-117144
chrX:49125402-49125931	chrX	+	49125554	49125958	True	NM_001114377,NM_033215,NM_001184745,NM_014009	chrX,chrX,chrX,chrX	-,+,+,-	FOXP3,PPP1R3F,PPP1R3F,FOXP3	-4266,347,347,-4266
chr1:236431257-236431906	chr1	+	236431276	236431809	True	NM_145861,NM_003272,NM_019891	chr1,chr1,chr1	+,+,-	EDARADD,GPR137B,ERO1LB	125870,-125509,13586
chr22:29832518-29834217	chr22	+	29832761	29833924	True	NR_002727,NM_021026	chr22,chr22	-,+	RFPL1S,RFPL1	4244,647
chr7:65017696-65018031	chr7	+	65017994	65018070	True	NM_000181,NR_027392	chr7,chr7	-,+	GUSB,INTS4L2	429281,94706
chr7:65017696-65018031	chr7	-	64603225	64603275	False	NR_027393,NM_001007253	chr7,chr7	+,-	INTS4L1,ERV3	-1673,-136101
chr7:65017696-65018031	chr7	+	64972200	64972250	False	NM_152626,NM_000181	chr7,chr7	+,-	ZNF92,GUSB	-133483,475101
chr7:65017696-65018031	chr7	-	65114378	65114454	False	NM_000181,NR_027392	chr7,chr7	-,+	GUSB,INTS4L2	332897,-1652
chr19:49312705-49313146	chr19	+	49312840	49313127	True	NM_019113,NR_028451,NM_001164773,NR_028450,NM_001190	chr19,chr19,chr19,chr19,chr19	+,-,-,-,-	FGF21,BCAT2,BCAT2,BCAT2,BCAT2	-53547,1101,1243,1243,1243
chr1:16091918-16092168	chr1	+	16091926	16092148	True	NM_001024215,NM_001024216,NM_001089591,NM_017556	chr1,chr1,chr1,chr1	+,+,-,+	FBLIM1,FBLIM1,UQCRHL,FBLIM1	-983,-518,42096,-6722
chr7:76679490-76680893	chr7	+	76679516	76680936	True	NM_006682,NR_028058	chr7,chr7	-,+	FGL2,LOC100132832	148264,-10770
chr15:99548845-99549045	chr15	+	99548913	99549055	True	NM_001102612,NM_001167902,NM_015286	chr15,chr15,chr15	-,-,+	PGPEP1L,PGPEP1L,SYNM	-28,2019,96230
chrX:53198904-53200883	chrX	+	53198919	53200822	True	NM_022117,NM_001146702	chrX,chrX	+,-	TSPYL2,KDM5C	-87440,53832
chr22:39050299-39051390	chr22	+	39050372	39050519	True	NM_001002880,NM_001013647,NM_015373	chr22,chr22,chr22	+,-,+	CBY1,LOC646851,CBY1	2138,2176,2138
chr20:17992592-17994236	chr20	+	17992641	17994143	True	NM_021220,NM_152227,NM_052865	chr20,chr20,chr20	-,-,+	OVOL2,SNX5,C20orf72	44433,-43151,-42930
chr2:55460336-55460831	chr2	+	55460392	55460768	True	NM_152385,NM_002954,NM_001135592,NM_001135598,NM_001177413	chr2,chr2,chr2,chr2,chr2	-,+,+,-,+	C2orf63,RPS27A,RPS27A,C2orf63,RPS27A	-943,-902,-1404,-693,-629
chr8:28244456-28244767	chr8	+	28244457	28244816	True	NM_018660,NM_006228	chr8,chr8	-,+	ZNF395,PNOC	-480,-69859
chr12:50344189-50344473	chr12	+	50344270	50344510	True	NM_000486,NR_026948	chr12,chr12	+,-	AQP2,LOC283332	13,-38624
chr10:85900226-85901282	chr10	+	85900242	85901064	True	NM_001017924,NM_014394	chr10,chr10	-,+	LRIT2,GHITM	84270,-1108
chr16:617092-617418	chr16	+	617230	617460	True	NM_176677,NM_148920,NM_145270,NR_024121,NM_004204	chr16,chr16,chr16,chr16,chr16	+,+,+,-,+	NHLRC4,PIGQ,C16orf11,NCRNA00235,PIGQ	-249,2543,-6859,-39823,2543
chr1:84608989-84610124	chr1	+	84609382	84610161	True	NM_182948,NM_024686	chr1,chr1	+,-	PRKACB,TTLL7	-7,-144549
chr12:110840840-110841144	chr12	+	110840928	110841184	True	NM_001137664,NM_016238,NM_013300	chr12,chr12,chr12	-,-,+	ANAPC7,ANAPC7,C12orf24	401,401,65047
chr6:3752903-3754202	chr6	+	3753086	3754238	True	NM_183373,NM_012135	chr6,chr6	-,+	C6orf145,FAM50B	-840,95393
chr15:90039545-90039792	chr15	+	90039571	90039651	True	NM_016321,NM_152259	chr15,chr15	-,+	RHCG,C15orf42	198,79166
chr19:41622186-41623081	chr19	+	41622252	41622974	True	NM_030589,NM_000774	chr19,chr19	-,+	CYP2A7,CYP2F1	-233595,-1950
chr5:159849008-159850694	chr5	+	159849033	159850728	True	NM_006425,NM_004219	chr5,chr5	-,+	SLU7,PTTG1	-2865,-219
chr18:55105232-55105663	chr18	+	55105245	55105649	True	NM_000140,NM_004852	chr18,chr18	-,+	FECH,ONECUT2	148370,-2379
chr1:160992471-160992907	chr1	+	160992642	160992815	True	NR_033385,NM_016946	chr1,chr1	+,-	KLHDC9,F11R	75335,-1509
chr12:54671409-54671861	chr12	+	54671470	54671824	True	NM_002136,NM_012117,NM_031157,NR_002944	chr12,chr12,chr12,chr12	+,-,+,+	HNRNPA1,CBX5,HNRNPA1,HNRNPA1P10	2663,2148,2663,2708
chrX:153882546-153882851	chrX	+	153882661	153882889	True	NM_172377,NM_020994,NM_139250	chrX,chrX,chrX	-,-,+	CTAG2,CTAG2,CTAG1A	-808,-808,-69294
chr5:94734045-94734445	chr5	+	94734162	94734422	True	NM_024717,NM_152548	chr5,chr5	-,+	MCTP1,FAM81B	-113883,-7178
chr1:51432008-51433244	chr1	+	51432207	51433269	True	NM_001262,NM_007051,NM_078626	chr1,chr1,chr1	+,-,+	CDKN2C,FAF1,CDKN2C	1097,-6271,2372
chr12:54473706-54474034	chr12	+	54473980	54474072	True	NR_026657,NR_026658	chr12,chr12	+,-	LOC100240734,LOC100240735	21920,1585
chr20:43936208-43936874	chr20	+	43936302	43936742	True	NM_003833,NM_030592,NM_030590,NM_014276	chr20,chr20,chr20,chr20	-,-,-,+	MATN4,MATN4,MATN4,RBPJL	275,275,275,-869
chr3:12595815-12596702	chr3	+	12595829	12596442	True	NM_001195279,NM_014160	chr3,chr3	-,+	LOC100129480,MKRN2	-8866,2151
chr16:779294-779603	chr16	+	779324	779630	True	NM_001031737,NM_023933,NM_032304	chr16,chr16,chr16	-,+,+	CCDC78,FAM173A,HAGHL	-2851,-8217,-2109
chr1:155231539-155231825	chr1	+	155231637	155231873	True	NM_020897,NM_198264,NM_052837,NM_005698,NM_006589	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	HCN3,FAM189B,SCAMP3,SCAMP3,FAM189B	15500,-6363,372,372,-6363
chr19:14117920-14118189	chr19	+	14118132	14118238	True	NM_002918,NM_080864	chr19,chr19	-,+	RFX1,RLN3	-998,20778
chr5:37087717-37088083	chr5	+	37087872	37088116	True	NM_133433,NM_023073	chr5,chr5	+,-	NIPBL,C5orf42	-211066,161464
chrX:73834487-73835084	chrX	+	73834512	73834860	True	NM_183353,NM_016120,NM_006517	chrX,chrX,chrX	-,-,+	RLIM,RLIM,SLC16A2	-51,-51,-193478
chr4:166034125-166034750	chr4	+	166034227	166034787	True	NM_001100389,NM_152620	chr4,chr4	-,+	TMEM192,TRIM60	-203,-81133
chr17:41394442-41394704	chr17	+	41394441	41394521	True	NR_027412,NM_145041	chr17,chr17	-,+	LOC100130581,TMEM106A	71795,-30599
chrX:103215778-103216789	chrX	+	103215785	103216581	True	NM_194324,NM_001002916	chrX,chrX	+,-	TMSB15B,H2BFWT	618,51727
chr2:39147639-39148531	chr2	+	39147871	39148580	True	NM_001145451,NR_028386	chr2,chr2	+,-	ARHGEF33,LOC375196	-1418,38962
chr7:99610352-99611409	chr7	+	99610396	99611309	True	NM_001185,NM_003439	chr7,chr7	-,+	AZGP1,ZKSCAN1	-36661,1909
chr2:120300810-120301889	chr2	+	120301025	120301888	True	NM_001029996,NM_002980	chr2,chr2	+,-	PCDP1,SCTR	136,-18997
chr7:120498572-120499524	chr7	+	120498602	120499387	True	NM_198267,NM_012338	chr7,chr7	+,-	ING3,TSPAN12	91429,-425
chr12:49391171-49391385	chr12	+	49391251	49391311	True	NM_015086,NM_005430	chr12,chr12	-,+	DDN,WNT1	1827,-19066
chr19:1845968-1846607	chr19	+	1845968	1846607	True	NR_034114,NM_020695	chr19,chr19	+,-	LOC100288123,REXO1	-23931,1896
chr11:89537561-89538030	chr11	+	89537799	89537875	True	NM_020358,NR_028346	chr11,chr11	-,+	TRIM49,TRIM53	3918,37289
chr11:89537561-89538030	chr11	-	89768141	89768191	False	NM_001195234,NR_028346	chr11,chr11	+,-	TRIM49L2,TRIM53	-3918,-32465
chr3:48602237-48602677	chr3	+	48602272	48602622	True	NM_033629,NM_004567,NM_033199	chr3,chr3,chr3	+,-,-	TREX1,PFKFB4,UCN2	-95094,-8045,-1071
chr1:53528302-53528507	chr1	+	53528356	53528418	True	NM_153703,NM_006671,NM_001199082,NM_001199080,NM_001199081	chr1,chr1,chr1,chr1,chr1	+,-,+,+,+	PODN,SLC1A7,PODN,PODN,PODN	-683,79921,-683,-683,-522
chr3:186615166-186616404	chr3	+	186615466	186616374	True	NM_181573,NM_173216	chr3,chr3	-,+	RFC4,ST6GAL1	-90982,31940
chr21:47472082-47472348	chr21	+	47472090	47472360	True	NM_058174,NM_006657	chr21,chr21	+,-	COL6A2,FTCD	45672,103171
chr14:100771200-100771447	chr14	+	100771294	100771484	True	NM_001039355,NR_029906	chr14,chr14	-,+	SLC25A29,MIR345	1426,2711
chr3:185658491-185659324	chr3	+	185658643	185659041	True	NM_004593,NR_033752	chr3,chr3	-,+	TRA2B,LOC344887	-2719,27225
chr2:107133880-107134259	chr2	+	107133891	107134125	True	NM_001144013,NR_003506	chr2,chr2	-,+	RGPD3,PLGLA	-49090,-131173
chr20:33411784-33412856	chr20	+	33411783	33412821	True	NR_002165,NR_028046,NM_014071	chr20,chr20,chr20	-,+,-	HMGB3P1,ACSS2,NCOA6	9494,49944,662
chr2:122041477-122041889	chr2	+	122041493	122041874	True	NR_023343,NM_014553	chr2,chr2	+,-	RNU4ATAC,TFCP2L1	246581,955
chr20:22383860-22384095	chr20	+	22383868	22384144	True	NR_027090,NM_001052	chr20,chr20	-,+	LOC284788,SSTR4	17187,631912
chr9:138329001-138329676	chr9	+	138329087	138329662	True	NM_014811,NM_001048265	chr9,chr9	+,-	KIAA0649,C9orf116	41985,62149
chr18:42259715-42260061	chr18	+	42259716	42260079	True	NM_015559,NM_001130110,NR_036203	chr18,chr18,chr18	+,+,-	SETBP1,SETBP1,MIR4319	783,58,290102
chr12:64242415-64243982	chr12	+	64242987	64243999	True	NM_020762,NM_173812	chr12,chr12	+,-	SRGAP1,DPY19L2	-4498,-180633
chr1:197116556-197117347	chr1	+	197116798	197117187	True	NM_018136,NM_001193640	chr1,chr1	-,+	ASPM,CRB1	-974,120146
chr5:78809446-78809765	chr5	+	78809480	78809764	True	NM_004272,NM_001114393	chr5,chr5	-,+	HOMER1,PAPD4	-14,98478
chr7:767472-767778	chr7	+	767483	767811	True	NM_017802,NM_001164760,NM_001164758,NM_001164759	chr7,chr7,chr7,chr7	+,-,-,-	HEATR2,PRKAR1B,PRKAR1B,PRKAR1B	-1196,-505,-170,-170
chr7:27158617-27159881	chr7	+	27158633	27159889	True	NM_030661,NM_153631,NR_002795	chr7,chr7,chr7	-,-,+	HOXA3,HOXA3,HOXA11-AS1	31,6800,65137
chr5:134075055-134075687	chr5	+	134075089	134075423	True	NM_001745,NM_016103	chr5,chr5	+,-	CAMLG,SAR1B	-970,-106556
chr20:966949-967625	chr20	+	967066	967642	True	NM_001029871,NM_178578	chr20,chr20	-,+	RSPO4,PSMF1	15315,126263
chr15:84873568-84873991	chr15	+	84873834	84873898	True	NR_027001,NR_033738	chr15,chr15	-,+	LOC388152,LOC440300	25072,-13285
chr15:84873568-84873991	chr15	-	84949335	84949399	False	NR_027001,NR_033738	chr15,chr15	-,+	LOC388152,LOC440300	-50415,-88786
chr15:84873568-84873991	chr15	+	85752912	85752976	False	NM_006738,NM_014300	chr15,chr15	+,-	AKAP13,SEC11A	170894,-493238
chr4:156609302-156610933	chr4	+	156609473	156610935	True	NM_001130684,NM_017419	chr4,chr4	+,-	GUCY1A3,ACCN5	-20716,176540
chr7:74584464-74584909	chr7	+	74584465	74584781	True	NM_001003795,NR_003187	chr7,chr7	+,-	GTF2IRD2B,NCF1C	-76169,3085
chr7:74584464-74584909	chr7	-	72637647	72637963	False	NR_002164,NR_003186	chr7,chr7	-,+	GTF2IRD2P1,NCF1B	47745,-3024
chr7:74584464-74584909	chr7	-	74191347	74191665	False	NM_173537,NM_000265	chr7,chr7	-,+	GTF2IRD2,NCF1	76226,-3089
chrX:36978621-36980333	chrX	+	36978712	36980309	True	NM_006520,NM_001013736	chrX,chrX	-,+	DYNLT3,FAM47C	726630,46122
chr21:17496045-17497330	chr21	+	17496237	17497366	True	NM_003489,NR_027790	chr21,chr21	-,+	NRIP1,C21orf34	-1059111,-53459
chr12:127650202-127650613	chr12	+	127650249	127650509	True	NR_033970,NR_033987	chr12,chr12	-,+	LOC440117,FLJ37505	-291013,715652
chrX:25210755-25211421	chrX	+	25210758	25211342	True	NM_139058,NR_003007	chrX,chrX	-,+	ARX,SCARNA23	-176693,-448253
chr2:232457069-232457638	chr2	+	232457271	232457623	True	NM_006056,NM_152614	chr2,chr2	-,+	NMUR1,C2orf57	-62089,-49
chrX:153098077-153098483	chrX	+	153098089	153098483	True	NM_032512,NM_006280	chrX,chrX	-,+	PDZD4,SSR4	-2086,-38121
chr1:31383107-31384475	chr1	+	31383586	31384228	True	NR_002762,NM_014654	chr1,chr1	+,-	PRO0611,SDC3	76683,-2106
chr19:17984620-17984848	chr19	+	17984626	17984808	True	NM_000215,NM_000453	chr19,chr19	-,+	JAK3,SLC5A5	-25785,-1895
chr8:79585663-79585916	chr8	+	79585869	79585953	True	NM_016010,NM_000880	chr8,chr8	+,-	FAM164A,IL7	-7644,131855
chr3:42003783-42004228	chr3	+	42003882	42004224	True	NM_001042646,NM_017886	chr3,chr3	+,-	TRAK1,ULK4	128521,-222
chr1:40140076-40140625	chr1	+	40140113	40140587	True	NM_203456,NM_032526	chr1,chr1	+,-	PPIE,NT5C1A	63929,-2403
chr3:122046298-122047203	chr3	+	122046439	122047035	True	NM_005213,NM_001017928	chr3,chr3	+,-	CSTA,CCDC58	-2479,55089
chr22:46644475-46645266	chr22	+	46644582	46645198	True	NM_207327,NM_017931	chr22,chr22	-,+	C22orf40,TTC38	1045,18662
chr20:23015326-23015571	chr20	+	23015388	23015602	True	NM_001052,NM_000361	chr20,chr20	+,-	SSTR4,THBD	454,14749
chr9:46706079-46707030	chr9	+	46706318	46707050	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-3075588,-18803
chr9:46706079-46707030	chr9	-	46824746	46825478	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-3194016,-137231
chr9:46706079-46707030	chr9	-	42000204	42000720	False	NR_003670,NM_001012421	chr9,chr9	-,+	KGFLP2,ANKRD20A2	18914,367582
chr9:46706079-46707030	chr9	-	44383055	44383571	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	606664,-752325
chr22:31002989-31004670	chr22	+	31002995	31004356	True	NR_036550,NM_000355,NM_001184726	chr22,chr22,chr22	-,+,+	PES1,TCN2,TCN2	5,24,24
chr11:46869768-46871073	chr11	+	46870361	46871121	True	NM_014756,NM_001003676,NM_001008938	chr11,chr11,chr11	-,+,-	CKAP5,C11orf49,CKAP5	-2518,87129,-2518
chr19:42381279-42382175	chr19	+	42381315	42382055	True	NM_198977,NM_001783,NM_021601,NM_004706,NM_199002,NM_173506	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,-	ARHGEF1,CD79A,CD79A,ARHGEF1,ARHGEF1,LYPD4	5211,-176,-176,5211,6390,-32807
chr17:38133838-38134654	chr17	+	38133837	38134666	True	NM_139280,NM_002809	chr17,chr17	-,+	ORMDL3,PSMD3	-49953,2393
chr5:60687332-60687715	chr5	+	60687342	60687714	True	NM_001048249,NM_020928	chr5,chr5	-,+	C5orf43,ZSWIM6	-229040,-59293
chr15:55487414-55488905	chr15	+	55487473	55488657	True	NM_004855,NM_016304	chr15,chr15	+,-	PIGB,RSL24D1	122475,626
chr12:122326941-122327417	chr12	+	122327054	122327474	True	NM_001171993,NM_002813	chr12,chr12	-,+	HPD,PSMD9	-537,-467
chr7:141907384-141908162	chr7	+	141907525	141908135	True	NR_024346,NR_003717	chr7,chr7	-,+	MOXD2P,LOC100124692	38807,-36611
chr7:129592922-129593510	chr7	+	129592965	129593484	True	NM_182697,NM_001202498,NM_003344,NM_014997	chr7,chr7,chr7,chr7	-,-,-,+	UBE2H,UBE2H,UBE2H,KLHDC10	-165,-182,-165,116864
chr1:1850900-1851253	chr1	+	1850919	1851295	True	NM_138705,NM_178545	chr1,chr1	+,-	CALML6,TMEM52	-4704,-179
chr3:3215838-3216044	chr3	+	3215843	3215958	True	NM_001173482,NM_016302,NM_182916	chr3,chr3,chr3	-,-,+	CRBN,CRBN,TRNT1	5506,5506,-47294
chr10:17163531-17164476	chr10	+	17163822	17164410	True	NM_001081,NM_003380	chr10,chr10	-,+	CUBN,VIM	7464,105847
chr15:42566201-42566891	chr15	+	42566206	42566872	True	NM_198141,NM_015497,NM_001110503	chr15,chr15,chr15	+,-,-	GANC,TMEM87A,TMEM87A	-17,-451,-451
chr17:29234239-29234723	chr17	+	29234374	29234551	True	NM_024683,NM_018404	chr17,chr17	-,+	C17orf42,ADAP2	-1088,14202
chr19:1131352-1131594	chr19	+	1131359	1131627	True	NM_001100122,NM_001039848	chr19,chr19	-,+	SBNO2,GPX4	696,-26761
chrX:100914306-100914639	chrX	+	100914322	100914652	True	NM_014782,NM_177949,NM_177948	chrX,chrX,chrX	-,-,+	ARMCX2,ARMCX2,ARMCX3	261,261,-36022
chr22:35534832-35535706	chr22	+	35534905	35535737	True	NM_001008494,NM_005368	chr22,chr22	+,-	ISX,MB	-72826,477697
chr17:35850619-35850852	chr17	+	35850696	35850908	True	NM_198839,NM_007026	chr17,chr17	-,+	ACACA,DUSP14	-83794,-796
chr2:54684429-54684833	chr2	+	54684512	54684786	True	NM_003128,NM_001003937	chr2,chr2	+,-	SPTBN1,TSPYL6	-1109,-201103
chr2:97480588-97481233	chr2	+	97480739	97481197	True	NM_017623,NM_144994,NM_199078	chr2,chr2,chr2	+,-,+	CNNM3,ANKRD23,CNNM3	793,28611,793
chr2:231280679-231281299	chr2	+	231280810	231281348	True	NM_001185015,NM_001080391,NM_003113	chr2,chr2,chr2	-,+,+	SP110,SP100,SP100	-190366,10,10
chr16:84536331-84538210	chr16	+	84536488	84537982	True	NM_014861,NM_020947	chr16,chr16	+,-	ATP2C2,KIAA1609	-134413,356
chr1:78515879-78516477	chr1	+	78515903	78516183	True	NM_003902,NM_017655	chr1,chr1	-,+	FUBP1,GIPC2	-71126,-4373
chr19:5851253-5851586	chr19	+	5851253	5851551	True	NM_001097641,NM_001097640,NM_004558,NM_001097639,NM_000149	chr19,chr19,chr19,chr19,chr19	-,-,+,-,-	FUT3,FUT3,NRTN,FUT3,FUT3	-4,-4,-27486,-4,-4
chr17:72858385-72858834	chr17	+	72858605	72858785	True	NM_000835,NM_178160	chr17,chr17	-,+	GRIN2C,OTOP2	-2598,61584
chr5:151151043-151151493	chr5	+	151151215	151151441	True	NM_005754,NM_198395,NM_004045	chr5,chr5,chr5	+,+,-	G3BP1,G3BP1,ATOX1	34,34,-13005
chr10:70749035-70749423	chr10	+	70749121	70749345	True	NM_001057,NM_015634	chr10,chr10	-,+	TACR2,KIAA1279	427379,-695
chr21:43770496-43771118	chr21	+	43770653	43771139	True	NM_005423,NM_001001895	chr21,chr21	-,+	TFF2,UBASH3A	119,52879
chr17:27274292-27275983	chr17	+	27274661	27275960	True	NM_020889,NM_005702,NM_001033561	chr17,chr17,chr17	-,+,-	PHF12,ERAL1,PHF12	2598,-92676,2598
chr6:159416896-159418462	chr6	+	159417107	159418302	True	NM_031924,NM_001195032	chr6,chr6	-,+	RSPH3,C6orf99	2959,-107544
chr22:35844537-35844807	chr22	+	35844648	35844784	True	NM_005368,NM_006739	chr22,chr22	-,+	MB,MCM5	168650,-48583
chr21:19617437-19617706	chr21	+	19617460	19617630	True	NM_002772,NM_024944,NM_001204174	chr21,chr21,chr21	-,+,+	TMPRSS15,CHODL,CHODL	158390,-361,561
chr13:31783096-31783751	chr13	+	31783153	31783617	True	NM_194318,NM_006644	chr13,chr13	+,-	B3GALTL,HSPH1	-9092,-47036
chrX:55290648-55290914	chrX	+	55290731	55290811	True	NM_001013435,NR_033460	chrX,chrX	+,-	PAGE5,PAGE3	-43990,404
chr9:86596063-86596881	chr9	+	86596168	86596899	True	NM_002140,NM_031263,NM_024945,NM_031262	chr9,chr9,chr9,chr9	-,-,+,-	HNRNPK,HNRNPK,RMI1,HNRNPK	-599,-984,-588,-599
chrX:120009801-120010108	chrX	+	120009858	120009946	True	NM_012084,NM_001145718	chrX,chrX	+,-	GLUD2,CT47B1	171515,-79
chrX:120009801-120010108	chrX	+	120090533	120090621	False	NM_012084,NM_001080139,NM_001080138,NM_001080137,NM_173571,NM_001080146,NM_001080144,NM_001080145,NM_001080142,NM_001080143,NM_001080140,NM_001080141	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,-,-,-,-,-,-,-,-,-,-,-	GLUD2,CT47A8,CT47A9,CT47A10,CT47A11,CT47A1,CT47A3,CT47A2,CT47A5,CT47A4,CT47A7,CT47A6	90840,-4939,-4939,-4939,-4939,-4939,-4939,-4939,-4939,-4939,-79,4772
chr5:137142027-137143130	chr5	+	137142043	137143116	True	NM_006805,NR_002713	chr5,chr5	-,+	HNRNPA0,NPY6R	-52004,-5212
chr3:142610918-142612800	chr3	+	142611340	142612108	True	NM_013363,NM_001080415	chr3,chr3	-,+	PCOLCE2,U2SURP	-3295,108263
chr2:60980912-60981224	chr2	+	60981053	60981233	True	NM_022894,NR_033980	chr2,chr2	+,-	PAPOLG,FLJ16341	2131,127266
chr19:15575650-15576443	chr19	+	15575654	15576287	True	NM_022904,NR_031716	chr19,chr19	-,+	RASAL3,MIR1470	-272,-15346
chr17:67269687-67271143	chr17	+	67269940	67270975	True	NM_080282,NM_002758	chr17,chr17	-,+	ABCA10,MAP2K6	-28984,139862
chr11:67611706-67612275	chr11	+	67611705	67611769	True	NM_001161473,NR_024249	chr11,chr11	+,-	ALDH3B1,LOC645332	164278,-38898
chr10:32855608-32857093	chr10	+	32856351	32856823	True	NM_024688,NM_025209	chr10,chr10	+,-	C10orf68,EPC1	-76,-220238
chr6:159064672-159065212	chr6	+	159064873	159065185	True	NM_006519,NM_001009991	chr6,chr6	-,+	DYNLT1,SYTL3	669,5860
chr16:27280631-27282012	chr16	+	27280740	27281921	True	NM_145080,NR_037184	chr16,chr16	-,+	NSMCE1,FLJ21408	-627,-1265
chr3:183770169-183770675	chr3	+	183770466	183770631	True	NM_001023587,NM_130770	chr3,chr3	-,+	ABCC5,HTR3C	-34739,203
chrX:49837204-49837863	chrX	+	49837203	49837866	True	NM_139289,NM_000084	chrX,chrX	-,+	AKAP4,CLCN5	127189,-5039
chr11:48000399-48000609	chr11	+	48000510	48000580	True	NM_002843,NM_015231,NM_001098503	chr11,chr11,chr11	+,-,+	PTPRJ,NUP160,PTPRJ	1529,-130453,1529
chr12:54867841-54868288	chr12	+	54867988	54868332	True	NM_005337,NM_144594	chr12,chr12	+,-	NCKAP1L,GTSF1	23162,-602
chr5:135527237-135527811	chr5	+	135527343	135527780	True	NR_024418,NM_001001419	chr5,chr5	-,+	LOC389332,SMAD5	1121,-58858
chr7:117819771-117820701	chr7	+	117819789	117820518	True	NM_033427,NM_016200	chr7,chr7	-,+	CTTNBP2,NAA38	-306228,3567
chr17:56769980-56770180	chr17	+	56769986	56770174	True	NM_001201457,NM_198393,NM_031272,NM_058216,NM_002876	chr17,chr17,chr17,chr17,chr17	-,-,-,+,+	TEX14,TEX14,TEX14,RAD51C,RAD51C	-570,-570,-570,-74,-74
chr19:55137658-55138230	chr19	+	55137858	55138228	True	NM_006669,NM_001081639,NM_001081638,NM_001081637,NM_145057	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	LILRB1,LILRB1,LILRB1,LILRB1,CDC42EP5	-9290,3679,3679,3739,-153436
chr9:107300268-107300768	chr9	+	107300281	107300815	True	NM_001004483,NM_001001961	chr9,chr9	+,-	OR13C8,OR13C3	30633,-1187
chr6:149434922-149436169	chr6	+	149435082	149435973	True	NM_207360,NM_015093	chr6,chr6	-,+	ZC3H12D,TAB2	370225,203462
chr16:30831424-30832294	chr16	+	30831861	30832185	True	NM_001080417,NM_014771	chr16,chr16	-,+	ZNF629,RNF40	-33338,-58287
chr7:30067573-30067940	chr7	+	30067597	30067809	True	NM_017946,NM_032639,NM_001197026,NM_001197027	chr7,chr7,chr7,chr7	-,+,+,+	FKBP14,PLEKHA8,PLEKHA8,PLEKHA8	-1329,167,167,167
chrX:83355826-83356535	chrX	+	83356225	83356579	True	NM_021118,NM_014496	chrX,chrX	+,-	CYLC1,RPS6KA6	-240117,86414
chr3:52866620-52867364	chr3	+	52866867	52867383	True	NM_002218,NM_001166449,NM_205853,NM_002217	chr3,chr3,chr3,chr3	-,-,-,+	ITIH4,ITIH4,MUSTN1,ITIH3	-2150,-2150,1902,-38134
chr13:77599878-77600585	chr13	+	77599881	77600578	True	NM_006493,NM_012158	chr13,chr13	+,-	CLN5,FBXL3	-33873,803
chr2:9983847-9984077	chr2	+	9983913	9984035	True	NM_006826,NM_005680	chr2,chr2	-,+	YWHAQ,TAF1B	-212807,-393
chr19:49313853-49314159	chr19	+	49314066	49314198	True	NM_019113,NR_028451,NM_001164773,NR_028450,NM_001190	chr19,chr19,chr19,chr19,chr19	+,-,-,-,-	FGF21,BCAT2,BCAT2,BCAT2,BCAT2	-54773,30,172,172,172
chr12:120905843-120906192	chr12	+	120906100	120906202	True	NM_003769,NM_001037494	chr12,chr12	-,+	SRSF9,DYNLL1	1406,1457
chr1:155003584-155004233	chr1	+	155003636	155004214	True	NM_152494,NM_144622,NM_001143687	chr1,chr1,chr1	+,-,+	DCST1,DCST2,DCST1	2067,2093,2067
chr11:118047309-118047673	chr11	+	118047396	118047579	True	NM_004588,NM_019894	chr11,chr11	-,+	SCN2B,TMPRSS4	-59,-99723
chr1:245027700-245027921	chr1	+	245027734	245027878	True	NM_004501,NM_198076,NM_031844	chr1,chr1,chr1	-,+,-	HNRNPU,FAM36A,HNRNPU	-1,-29146,-1
chr2:47790797-47792042	chr2	+	47790815	47791827	True	NM_022055,NM_000251	chr2,chr2	-,+	KCNK12,MSH2	5695,-160603
chr22:36635342-36635588	chr22	+	36635406	36635630	True	NM_030882,NM_145637,NM_001136540	chr22,chr22,chr22	-,-,+	APOL2,APOL2,APOL1	109,420,13486
chr11:64054030-64054369	chr11	+	64054072	64054368	True	NM_020155,NM_001177358,NM_001170880,NM_004322,NM_001170881,NM_001170726,NM_033310,NM_032989	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,-,+,+,+,-	GPR137,GPR137,GPR137,BAD,GPR137,GPR137,KCNK4,BAD	-541,-1840,-541,-1896,-1838,-2312,4424,-1896
chr16:88493658-88493956	chr16	+	88493658	88493786	True	NM_000101,NM_001127464	chr16,chr16	-,+	CYBA,ZNF469	223721,92
chr19:11305610-11305888	chr19	+	11305661	11305930	True	NM_015493,NM_018687,NM_001136191	chr19,chr19,chr19	-,+,-	KANK2,LOC55908,KANK2	-395,44364,2363
chr1:113463110-113463481	chr1	+	113463300	113463503	True	NR_002796,NM_001166496	chr1,chr1	+,-	AKR7A2P1,SLC16A1	2468,35232
chr2:63274002-63274499	chr2	+	63274239	63274455	True	NR_027069,NM_014562,NM_001199770,NR_033389	chr2,chr2,chr2,chr2	-,+,+,-	LOC100132215,OTX1,OTX1,LOC100132215	441,3481,2736,1251
chr16:85339550-85340065	chr16	+	85339728	85340074	True	NR_033984,NM_198491	chr16,chr16	+,-	LOC400548,FAM92B	-169023,-193614
chr12:133336642-133337114	chr12	+	133336734	133337016	True	NM_001170544,NM_015114	chr12,chr12	+,-	PGAM5,ANKLE2	-49392,1485
chr11:62520770-62521091	chr11	+	62520771	62521079	True	NM_002696,NM_024784	chr11,chr11	+,-	POLR2G,ZBTB3	7931,627
chr1:155224677-155224908	chr1	+	155224677	155224741	True	NM_020897,NM_198264,NM_052837,NM_006589,NM_005698	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	HCN3,FAM189B,SCAMP3,FAM189B,SCAMP3	22632,583,7504,583,7504
chr1:25258529-25258746	chr1	+	25258541	25258709	True	NM_013943,NM_004350	chr1,chr1	+,-	CLIC4,RUNX3	-186832,-1771
chr19:36507846-36508325	chr19	+	36507986	36508240	True	NM_198867,NM_032878,NM_001039876,NM_001042631	chr19,chr19,chr19,chr19	-,-,-,+	ALKBH6,ALKBH6,C19orf46,SDHAF1	-2845,-2845,-8314,-21947
chr19:41902408-41902714	chr19	+	41902407	41902735	True	NM_020158,NM_000709,NM_001164783	chr19,chr19,chr19	-,+,+	EXOSC5,BCKDHA,BCKDHA	571,958,958
chr5:49715991-49716423	chr5	+	49716034	49716444	True	NM_198449,NM_001178055	chr5,chr5	-,+	EMB,PARP8	20846,245288
chr2:9697375-9698334	chr2	+	9697422	9698382	True	NM_001039613,NM_003183	chr2,chr2	+,-	IAH1,ADAM17	-82803,-1505
chr12:5265263-5266346	chr12	+	5265317	5266147	True	NM_006422,NM_002234	chr12,chr12	-,+	AKAP3,KCNA5	-510974,-112283
chr17:42219712-42221436	chr17	+	42219761	42221335	True	NM_001171251,NM_005474,NM_024032	chr17,chr17,chr17	+,-,+	C17orf53,HDAC5,C17orf53	-538,-18747,-538
chr1:156032273-156032564	chr1	+	156032326	156032570	True	NM_020131,NM_014017,NM_001145264,NM_020387	chr1,chr1,chr1,chr1	-,+,+,+	UBQLN4,LAMTOR2,LAMTOR2,RAB25	-8810,-7860,-7860,-1411
chr4:17511919-17512817	chr4	+	17511925	17512827	True	NM_000320,NM_001079827	chr4,chr4	-,+	QDPR,CLRN2	1080,3960
chr3:126292817-126294225	chr3	+	126292853	126294161	True	NM_152533,NM_152889	chr3,chr3	-,+	C3orf22,CHST13	-15095,-49736
chr17:79936019-79936256	chr17	+	79936032	79936122	True	NM_178493,NM_024083	chr17,chr17	-,+	NOTUM,ASPSCR1	-16975,-657
chr2:148778307-148778508	chr2	+	148778349	148778543	True	NM_001190881,NM_001190882,NM_001190879,NM_018328,NM_181741,NM_181742,NM_002552	chr2,chr2,chr2,chr2,chr2,chr2,chr2	-,-,-,+,-,-,-	ORC4,ORC4,ORC4,MBD5,ORC4,ORC4,ORC4	-19,-43,-33,36,-22,680,-20
chr22:50965400-50965611	chr22	+	50965399	50965625	True	NM_005138,NM_001953,NM_001169111,NM_001169110,NM_001014440,NM_152299,NM_001169109,NM_001113755,NM_001113756	chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,-,+,-,-,-	SCO2,TYMP,SCO2,SCO2,ODF3B,NCAPH2,SCO2,TYMP,TYMP	-1365,2939,-1366,-825,5433,-18805,-531,2939,2683
chr12:57872893-57873174	chr12	+	57872896	57873220	True	NM_032496,NM_004990,NM_001080157,NM_001080156	chr12,chr12,chr12,chr12	-,+,-,-	ARHGAP9,MARS,ARHGAP9,ARHGAP9	463,8515,254,-1168
chr4:144943921-144944809	chr4	+	144944131	144944742	True	NM_002100,NR_003675	chr4,chr4	-,+	GYPB,LOC441046	-3635,-463557
chr4:144943921-144944809	chr4	+	144833899	144833949	False	NM_198682,NR_003675,NM_002102	chr4,chr4,chr4	-,+,-	GYPE,LOC441046,GYPE	-7183,-353325,-7183
chr4:144943921-144944809	chr4	+	145066030	145066087	False	NM_022475,NM_002099	chr4,chr4	+,-	HHIP,GYPA	501060,-4126
chr7:27279967-27280576	chr7	+	27280034	27280562	True	NM_001989,NM_000522	chr7,chr7	+,-	EVX1,HOXA13	1601,-40309
chr17:30465795-30466632	chr17	+	30466066	30466299	True	NM_001033566,NR_002222,NM_018307,NM_001033568	chr17,chr17,chr17,chr17	+,-,+,+	RHOT1,ARGFXP2,RHOT1,RHOT1	3173,12342,3173,3173
chr8:94756190-94757254	chr8	+	94756280	94757217	True	NM_203390,NR_027259,NM_001142301,NM_153704,NR_024522	chr8,chr8,chr8,chr8,chr8	-,+,+,+,+	RBM12B,C8orf39,TMEM67,TMEM67,TMEM67	-3056,-3992,9854,9854,9854
chr10:47746934-47747338	chr10	+	47747045	47747375	True	NR_024495,NM_001630	chr10,chr10	-,+	LOC642826,ANXA8L2	-503551,-176
chr10:47746934-47747338	chr10	-	47173654	47173868	False	NM_001137549,NM_001137548,NM_005972,NM_001137556,NM_001098845,NM_001040084	chr10,chr10,chr10,chr10,chr10,chr10	-,-,+,-,-,-	FAM25G,FAM25C,PPYR1,FAM25B,ANXA8L1,ANXA8	7870,7870,-90171,7870,222,304
chr10:47746934-47747338	chr10	+	48255478	48255692	False	NM_001137549,NM_001137548,NM_001137556,NM_001098845,NM_001040084,NM_002900	chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,-	FAM25G,FAM25C,FAM25B,ANXA8L1,ANXA8,RBP3	-7867,-7867,-7867,-222,-304,135349
chr10:47746934-47747338	chr10	-	49199473	49199803	False	NM_001137549,NM_001137548,NM_002750,NM_001137556	chr10,chr10,chr10,chr10	-,-,+,-	FAM25G,FAM25C,MAPK8,FAM25B	8072,8072,409883,8072
chr16:4895924-4896767	chr16	+	4896052	4896644	True	NM_001079514,NM_016936,NM_032569	chr16,chr16,chr16	+,+,-	UBN1,UBN1,GLYR1	1267,5432,709
chr11:63654768-63655953	chr11	+	63654889	63655929	True	NM_017490,NM_173587	chr11,chr11	+,-	MARK2,RCOR2	57,28437
chr16:21658501-21658710	chr16	+	21658516	21658758	True	NM_144672,NM_005849	chr16,chr16	+,-	OTOA,IGSF6	31076,5264
chr7:151326370-151327954	chr7	+	151326498	151327714	True	NR_034013,NM_024429	chr7,chr7	+,-	LOC100131176,PRKAG2	-220227,1682
chr11:46401445-46401703	chr13	+	44545284	44545587	False	NM_144974,NR_026955	chr13,chr13	-,+	CCDC122,NCRNA00284	-91458,50883
chr11:46401445-46401703	chr11	+	46401446	46401750	True	NM_001012333,NM_002391,NM_001012334,NM_000741	chr11,chr11,chr11,chr11	+,+,+,-	MDK,MDK,MDK,CHRM4	1552,1468,867,6407
chr1:85515766-85516850	chr1	+	85515792	85516664	True	NM_145172,NM_018298	chr1,chr1	+,-	WDR63,MCOLN3	11328,-1623
chrX:84357261-84357525	chrX	+	84357308	84357577	True	NM_001012980,NM_198450	chrX,chrX	-,+	SATL1,APOOL	6454,-98469
chr1:32689179-32689692	chr1	+	32689217	32689672	True	NM_003757,NM_019118	chr1,chr1	+,-	EIF3I,TMEM234	-1297,-1291
chr2:27718305-27719482	chr2	+	27718404	27719248	True	NM_022823,NM_015662,NM_001486	chr2,chr2,chr2	-,-,+	FNDC4,IFT172,GCKR	-278,-5833,457
chr11:18343666-18343920	chr11	+	18343745	18343905	True	NM_007216,NM_005316,NM_181508,NM_001142307,NM_181507	chr11,chr11,chr11,chr11,chr11	-,+,-,+,-	HPS5,GTF2H1,HPS5,GTF2H1,HPS5	-24,0,-24,0,-24
chr5:131627292-131628959	chr5	+	131627611	131628925	True	NM_003059,NM_001142599	chr5,chr5	+,-	SLC22A4,P4HA2	1219,-64055
chr19:49115956-49116248	chr19	+	49116068	49116284	True	NM_001204159,NM_001204158,NM_000979,NM_017708,NM_133498,NM_020126	chr19,chr19,chr19,chr19,chr19,chr19	+,+,-,-,+,+	SPHK2,SPHK2,RPL18,FAM83E,SPACA4,SPHK2	6506,6263,6199,460,-6119,6263
chr1:110525906-110526189	chr1	+	110526000	110526188	True	NM_006621,NM_006492	chr1,chr1	+,-	AHCYL1,ALX3	1119,87184
chr5:81267803-81268007	chr5	+	81267834	81268036	True	NM_031482,NM_012446,NM_001131028	chr5,chr5,chr5	+,-,+	ATG10,SSBP2,ATG10	-41,-220762,-41
chr1:10510362-10511061	chr1	+	10510371	10511011	True	NM_004401,NM_001302	chr1,chr1	-,+	DFFA,CORT	21660,-646
chr8:35094306-35094600	chr8	+	35094366	35094623	True	NM_080872,NM_024025	chr8,chr8	+,-	UNC5D,DUSP26	-1450,-1636927
chr3:195537565-195537869	chr3	+	195537582	195537864	True	NM_018406,NM_138297,NM_001098516,NM_004532	chr3,chr3,chr3,chr3	-,-,+,-	MUC4,MUC4,MUC20,MUC4	1334,1334,-86535,1334
chr8:146127921-146128161	chr8	+	146127929	146128183	True	NM_001109689,NM_021061,NM_003416	chr8,chr8,chr8	-,-,+	ZNF250,ZNF250,ZNF7	-1083,-1083,-75077
chr5:169930289-169930839	chr5	+	169930479	169930699	True	NM_001034837,NM_004137,NM_014592	chr5,chr5,chr5	+,-,+	KCNIP1,KCNMB1,KCNIP1	348,-113841,348
chr2:34130993-34131913	chr2	+	34131052	34131132	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-392169,-177768
chr18:14975163-14975633	chr18	+	14975296	14975532	True	NR_027417,NR_036153	chr18,chr18	-,+	LOC644669,MIR3156-2	350436,-145182
chr1:34328905-34330319	chr1	+	34329134	34330292	True	NM_145205,NR_033264,NM_052896	chr1,chr1,chr1	+,+,-	HMGB4,HMGB4,CSMD2	-3109,-51,301203
chr1:235189077-235190763	chr1	+	235189246	235190345	True	NM_001037277,NR_002956	chr1,chr1	+,-	GGPS1,SNORA14B	301407,100958
chr15:55789721-55790371	chr15	+	55789889	55790339	True	NM_001198784,NR_037923	chr15,chr15	+,-	FLJ27352,DYX1C1-CCPG1	-89217,493
chr17:42419040-42419811	chr17	+	42419536	42419610	True	NM_002087,NM_016016	chr17,chr17	+,-	GRN,SLC25A39	2880,-17319
chr15:69099704-69101428	chr15	+	69099976	69101400	True	NR_031680,NR_026808,NR_036197	chr15,chr15,chr15	+,-,-	MIR548H4,C15orf28,MIR4312	14902,-536,-5712
chr5:133747937-133749455	chr5	+	133747992	133749115	True	NM_003337,NM_080656	chr5,chr5	+,-	UBE2B,CDKN2AIPNL	-41173,-394
chr10:71334446-71334682	chr10	+	71334499	71334701	True	NM_145306,NM_020999	chr10,chr10	+,-	C10orf35,NEUROG3	55301,-1289
chrX:23795519-23796293	chrX	+	23795690	23795864	True	NM_001037171,NM_002970,NR_027783	chrX,chrX,chrX	-,+,+	ACOT9,SAT1,SAT1	-34283,5410,5410
chr6:114270822-114272722	chr6	+	114270881	114272288	True	NM_001527,NR_027060	chr6,chr6	-,+	HDAC2,FLJ34503	20121,-45388
chr13:111361734-111362596	chr13	+	111361754	111362372	True	NM_198218,NM_198219,NM_005537,NM_024537,NM_198217	chr13,chr13,chr13,chr13,chr13	+,+,+,-,+	ING1,ING1,ING1,CARS2,ING1	3237,3252,4986,-3274,2710
chr19:4009112-4009964	chr19	+	4009166	4009942	True	NM_015897,NM_001961	chr19,chr19	+,-	PIAS4,EEF2	-1468,-23705
chr16:4741814-4742955	chr16	+	4741914	4742890	True	NM_001193452,NM_032349,NM_133450	chr16,chr16,chr16	+,+,-	NUDT16L1,NUDT16L1,ANKS3	803,803,41323
chr7:29519592-29520491	chr7	+	29519619	29520383	True	NM_001039936,NR_024278	chr7,chr7	+,-	CHN2,LOC646762	-184,204421
chr2:98331961-98332582	chr2	+	98331990	98332622	True	NM_001079,NM_005735	chr2,chr2	+,-	ZAP70,ACTR1B	-2010,-51429
chr11:102961563-102961986	chr11	+	102961748	102962040	True	NM_001080463,NM_032299	chr11,chr11	+,-	DYNC2H1,DCUN1D5	18119,960
chr1:114520673-114522562	chr1	+	114520768	114522484	True	NM_006594,NM_020190	chr1,chr1	-,+	AP4B1,OLFML3	-73027,-227
chr7:154862916-154863872	chr7	+	154863044	154863841	True	NM_007349,NM_024012	chr7,chr7	-,+	PAXIP1,HTR5A	-68362,-549
chr2:3382852-3383365	chr2	+	3383004	3383257	True	NM_016030,NM_003310	chr2,chr2	+,-	TTC15,TSSC1	188,-1351
chr1:26514405-26514772	chr1	+	26514589	26514761	True	NM_198137,NM_001077262	chr1,chr1	+,-	CATSPER4,UBXN11	2357,118484
chr20:44509999-44510645	chr20	+	44510045	44510437	True	NM_080749,NM_080608,NM_001167594,NM_080603,NM_000308,NM_001127695	chr20,chr20,chr20,chr20,chr20,chr20	-,-,+,+,+,+	NEURL2,C20orf165,CTSA,ZSWIM1,CTSA,CTSA	9516,5853,9153,-248,9153,9153
chr7:158748831-158749168	chr7	+	158748839	158749129	True	NR_024394,NM_020728	chr7,chr7	+,-	LOC154822,ESYT2	51915,-126520
chr7:72440872-72442464	chr7	+	72441137	72442292	True	NR_033323,NR_003602	chr7,chr7	-,+	NSUN5P2,LOC541473	-15835,-996
chr7:72440872-72442464	chr7	-	75022604	75023759	False	NM_198853,NM_198924,NR_003614	chr7,chr7,chr7	+,+,-	TRIM74,TRIM73,PMS2L2	1143,1143,-34389
chr17:35771385-35771600	chr17	+	35771425	35771517	True	NM_001488,NM_001166105,NM_133439,NM_198839,NM_198834	chr17,chr17,chr17,chr17,chr17	+,+,+,-,-	TADA2A,TADA2A,TADA2A,ACACA,ACACA	-4164,-4499,-4164,-4523,-4523
chr7:102300082-102300723	chr7	+	102300194	102300490	True	NM_032959,NM_001031618,NM_001166339	chr7,chr7,chr7	-,+,+	POLR2J2,SPDYE2,SPDYE2L	11742,-9473,-9473
chr7:102300082-102300723	chr7	-	101988763	101988873	False	NM_024653,NM_001146210	chr7,chr7	+,-	PRKRIP1,SPDYE6	47930,8066
chr7:102300082-102300723	chr7	+	102201104	102201400	False	NM_001031618,NM_001166339,NM_001097615	chr7,chr7,chr7	+,+,-	SPDYE2,SPDYE2L,POLR2J3	-9476,-9476,11718
chr11:65154538-65155302	chr11	+	65154689	65155350	True	NM_031904,NM_182556,NM_001077241	chr11,chr11,chr11	+,-,-	FRMD8,SLC25A45,SLC25A45	-710,-4547,-4547
chr8:117778828-117779036	chr8	+	117778857	117778943	True	NM_003756,NM_032334	chr8,chr8	-,+	EIF3H,UTP23	-10795,-166
chrX:26210572-26210978	chrX	+	26210584	26210971	True	NM_139058,NM_173523	chrX,chrX	-,+	ARX,MAGEB6	-1176519,-78
chr13:82261157-82262458	chr13	+	82261160	82262106	True	NM_019080,NM_005842	chr13,chr13	+,-	NDFIP2,SPRY2	-2205958,-1346074
chr17:4848637-4849966	chr17	+	4848734	4849892	True	NM_001165418,NM_053013,NM_005022,NM_001165417,NM_003562,NM_001193503,NM_001976,NM_015528	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,-,-,-,+,+,+	SLC25A11,ENO3,PFN1,SLC25A11,SLC25A11,ENO3,ENO3,RNF167	-5272,4491,1983,-5272,-5272,4491,4491,-5155
chr1:9970919-9971578	chr1	+	9970924	9971403	True	NM_022787,NM_001012329,NM_020248	chr1,chr1,chr1	+,-,-	NMNAT1,CTNNBIP1,CTNNBIP1	32082,-608,-608
chr16:85833740-85833959	chr16	+	85833761	85833861	True	NM_001142288,NM_001861,NM_006067	chr16,chr16,chr16	-,+,-	COX4NB,COX4I1,COX4NB	-613,-639,-613
chr2:106017390-106018862	chr2	+	106017390	106018211	True	NM_001450,NM_201555,NM_001039492,NM_024093	chr2,chr2,chr2,chr2	-,-,-,+	FHL2,FHL2,FHL2,C2orf49	-1709,-1709,-1815,-63428
chr17:26685259-26686354	chr17	+	26685325	26686253	True	NM_001080837,NM_015584,NM_152464	chr17,chr17,chr17	-,-,+	SEBOX,POLDIP2,TMEM199	6062,-722,-697
chr9:31916968-31918479	chr9	+	31916986	31918324	True	NM_014314,NM_002197	chr9,chr9	-,+	DDX58,ACO1	608048,466276
chr20:33143040-33143939	chr20	+	33143347	33143454	True	NM_080476,NM_032514,NM_181509	chr20,chr20,chr20	-,+,+	PIGU,MAP1LC3A,MAP1LC3A	121696,3064,-8714
chr4:185748588-185748793	chr4	+	185748626	185748824	True	NM_152683,NM_001995	chr4,chr4	+,-	CCDC111,ACSL1	-177910,-1411
chr2:74725527-74725931	chr2	+	74725558	74725920	True	NR_024606,NM_001009812,NM_032673	chr2,chr2,chr2	+,-,-	LOC151534,LBX2,PCGF1	3823,4573,8951
chr18:63418795-63419080	chr18	+	63418839	63419095	True	NM_021153,NM_004361,NM_033646	chr18,chr18,chr18	-,+,+	CDH19,CDH7,CDH7	852171,-733,-1402
chr6:42014881-42015865	chr6	+	42014907	42015844	True	NM_138572,NM_001136126,NM_001136017	chr6,chr6,chr6	+,-,-	TAF8,CCND3,CCND3	2406,819,819
chr7:103843856-103845628	chr7	+	103843866	103845215	True	NM_002553,NM_199000,NM_181747	chr7,chr7,chr7	-,+,-	ORC5,LHFPL3,ORC5	3346,123888,3346
chr7:143894799-143896564	chr7	+	143895335	143896405	True	NM_001003702,NM_198495	chr7,chr7	-,+	ARHGEF35,CTAGE4	-2544,-14839
chr7:143894799-143896564	chr7	-	144048775	144049845	False	NM_005435,NM_001080413	chr7,chr7	+,-	ARHGEF5,NOBOX	2643,50992
chr1:90053015-90053572	chr1	+	90053158	90053573	True	NM_015350,NR_033981	chr1,chr1	+,-	LRRC8B,FLJ27354	-28945,44931
chr17:33289323-33290051	chr17	+	33289333	33290098	True	NM_006584,NM_052857,NM_001193530,NM_001193529	chr17,chr17,chr17,chr17	-,+,-,-	CCT6B,ZNF830,CCT6B,CCT6B	-805,-835,-805,-805
chr9:40788446-40789240	chr9	+	40788501	40789134	True	NR_026801,NM_033160	chr9,chr9	+,-	FAM74A3,ZNF658	-73028,3035
chr9:40788446-40789240	chr9	+	39460913	39461461	False	NM_001040065,NR_003528	chr9,chr9	+,-	FAM75A2,LOC653501	-105265,3127
chr9:40788446-40789240	chr9	+	41605931	41606479	False	NM_001113541,NR_003528	chr9,chr9	+,-	FAM75A5,LOC653501	-105303,3127
chr6:108879345-108879728	chr6	+	108879499	108879729	True	NM_201559,NM_152827,NM_001455	chr6,chr6,chr6	+,-,+	FOXO3,SNX3,FOXO3	1296,-297035,2339
chr19:6140582-6141371	chr19	+	6140687	6141375	True	NM_134433,NM_030924	chr19,chr19	-,+	RFX2,ACSBG2	-30023,-5037
chr15:41406761-41407858	chr15	+	41407083	41407643	True	NM_017553,NM_007236	chr15,chr15	-,+	INO80,CHP	747,115793
chr1:4044482-4044847	chr1	+	4044489	4044779	True	NR_024455,NM_207356	chr1,chr1	+,-	LOC100133612,C1orf174	-227572,-227632
chr9:131842817-131843335	chr9	+	131842851	131843333	True	NM_000755,NM_020438,NM_001135917	chr9,chr9,chr9	-,+,+	CRAT,DOLPP1,DOLPP1	29787,49,49
chrX:153625563-153625864	chrX	+	153625642	153625776	True	NM_006013,NM_006730,NR_000011,NR_026898	chrX,chrX,chrX,chrX	+,-,+,+	RPL10,DNASE1L1,SNORA70,RPL10	794,11849,2845,794
chr6:3445727-3446006	chr6	+	3445733	3446037	True	NM_021945,NM_001128592	chr6,chr6	-,+	SLC22A23,PSMG4	-515,-186634
chr3:48960755-48961044	chr3	+	48960895	48960962	True	NM_006321,NM_001123040	chr3,chr3	+,-	ARIH2,C3orf71	-4670,-4077
chr11:71928825-71929954	chr11	+	71928925	71930003	True	NM_001113534,NM_005169,NM_001567,NM_000803,NM_001113535,NM_001113536	chr11,chr11,chr11,chr11,chr11,chr11	+,-,+,+,+,+	FOLR2,PHOX2A,INPPL1,FOLR2,FOLR2,FOLR2	-1157,25267,5878,-1157,-1157,-1157
chr11:6408427-6409205	chr11	+	6408562	6409022	True	NM_000543,NM_001164,NM_001007593	chr11,chr11,chr11	+,-,+	SMPD1,APBB1,SMPD1	2621,31332,2621
chr16:67206156-67207720	chr16	+	67206181	67207655	True	NM_001538,NM_003946,NM_001040715,NM_001040667,NM_001185058,NM_001185057	chr16,chr16,chr16,chr16,chr16,chr16	+,+,-,+,+,+	HSF4,NOL3,KIAA0895L,HSF4,NOL3,NOL3	-8944,100,10278,-8944,-1827,109
chr10:104474428-104474671	chr10	+	104474533	104474593	True	NM_178858,NM_004311	chr10,chr10	+,-	SFXN2,ARL3	-286,-343
chr1:39336439-39336835	chr1	+	39336555	39336647	True	NR_037632,NM_001136275,NM_012333	chr1,chr1,chr1	-,+,-	MYCBP,AKIRIN1,MYCBP	2453,120268,2453
chr4:110653935-110655250	chr4	+	110654419	110655009	True	NM_018983,NM_030821	chr4,chr4	+,-	GAR1,PLA2G12A	81656,-3177
chr3:118820076-118821935	chr3	+	118820620	118821772	True	NM_152539,NM_152538	chr3,chr3	+,-	C3orf30,IGSF11	43224,43176
chr14:24627391-24627961	chr14	+	24627515	24627937	True	NM_006084,NM_002818	chr14,chr14	+,-	IRF9,PSME2	2484,-11660
chr7:44582324-44582712	chr7	+	44582384	44582734	True	NM_001101648,NM_001003941,NM_013389	chr7,chr7,chr7	-,+,-	NPC1L1,OGDH,NPC1L1	-1470,63386,-1470
chr19:59025802-59026136	chr19	+	59025879	59026103	True	NM_012254,NM_032792,NM_005762	chr19,chr19,chr19	-,-,+	SLC27A5,ZBTB45,TRIM28	-2447,4868,29732
chr1:185337464-185339229	chr1	+	185337596	185339124	True	NM_017673,NM_006469	chr1,chr1	+,-	SWT1,IVNS1ABP	-211369,-51135
chr8:96032349-96032875	chr8	+	96032435	96032887	True	NR_037484,NM_152416	chr8,chr8	-,+	MIR3150B,C8orf38	52387,4333
chr7:32100890-32102209	chr7	+	32101316	32102149	True	NM_006658,NM_001191057,NM_001191056,NM_001191059,NM_005020	chr7,chr7,chr7,chr7,chr7	+,-,-,-,-	C7orf16,PDE1C,PDE1C,PDE1C,PDE1C	-374745,8372,8372,8886,8951
chr1:158980532-158980891	chr1	+	158980531	158980883	True	NM_004833,NM_005531	chr1,chr1	-,+	AIM2,IFI16	65821,-900
chr19:36205599-36206568	chr19	+	36205598	36206366	True	NM_014727,NM_024660,NM_014383	chr19,chr19,chr19	+,-,+	MLL4,IGFLR1,ZBTB32	2554,27035,-1819
chr20:62793753-62794065	chr20	+	62793910	62794050	True	NM_004535,NM_005286	chr20,chr20	+,-	MYT1,NPBWR2	1776,-55726
chr3:196159507-196160128	chr3	+	196159543	196160099	True	NM_001105573,NM_015562	chr3,chr3	+,-	FBXO45,UBXN7	135625,-198
chr11:110301331-110301620	chr11	+	110301335	110301657	True	NM_002906,NM_004109	chr11,chr11	-,+	RDX,FDX1	-133898,-792
chr12:6881832-6882386	chr12	+	6881970	6882286	True	NM_002286,NR_026581,NM_002824	chr12,chr12,chr12	+,-,+	LAG3,MLF2,PTMS	-351,-19334,-6480
chr1:153538291-153538962	chr1	+	153538394	153538800	True	NM_006271,NM_005978	chr1,chr1	+,-	S100A1,S100A2	62072,-88
chr3:72498616-72499299	chr3	+	72498812	72498976	True	NM_001080393,NM_012234	chr3,chr3	+,-	GXYLT2,RYBP	438408,-3038
chr12:123199613-123200235	chr12	+	123199615	123200219	True	NM_006018,NM_003677	chr12,chr12	-,+	GPR109B,DENR	1270,37151
chr4:54966110-54966315	chr4	+	54966191	54966293	True	NM_133267,NM_012110	chr4,chr4	+,-	GSX2,CHIC2	2,-35403
chr13:103344821-103345777	chr13	+	103344949	103345543	True	NM_003291,NM_001010977	chr13,chr13	+,-	TPP2,METTL21C	-95721,1361
chr19:17864433-17864862	chr19	+	17864432	17864811	True	NM_001161359,NM_001161358,NM_001080421,NM_015122,NM_001161357	chr19,chr19,chr19,chr19,chr19	+,+,-,+,+	FCHO1,FCHO1,UNC13A,FCHO1,FCHO1	-2200,-5959,-65424,-2200,-5959
chr6:29855117-29855471	chr6	+	29855354	29855430	True	NR_001317,NR_001434	chr6,chr6	-,+	HCG4P6,HLA-H	38048,-22
chr5:6372912-6373492	chr5	+	6373061	6373127	True	NM_001145161,NM_032286	chr5,chr5	+,-	UBE2QL1,MED10	75608,5562
chr20:34024961-34025250	chr20	+	34025070	34025202	True	NM_007186,NM_000557	chr20,chr20	+,-	CEP250,GDF5	18020,875
chrY:59216674-59216887	chrY	+	59216675	59216789	True	NM_005638,NR_033714,NR_033715,NM_001185183,NR_002179,NM_001145149	chrY,chrY,chrY,chrY,chrY,chrY	+,+,+,+,-,+	VAMP7,VAMP7,VAMP7,VAMP7,TTTY17C,VAMP7	-2783,-2783,-2783,-2783,-31885755,-2783
chrY:59216674-59216887	chrX	+	155113669	155113783	False	NM_005638,NR_033714,NR_033715,NM_018196,NM_001185183,NM_001145149	chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,-,+,+	VAMP7,VAMP7,VAMP7,TMLHE,VAMP7,VAMP7	-2783,-2783,-2783,-271047,-2783,-2783
chr7:154862522-154862916	chr7	+	154862590	154862950	True	NM_007349,NM_024012	chr7,chr7	-,+	PAXIP1,HTR5A	-67908,-95
chr14:20112495-20112997	chr22	+	16380408	16380623	False	NM_001005239,NR_001591	chr22,chr22	-,+	OR11H1,psiTPTE22	69238,702177
chr14:20112495-20112997	chr14	+	20112670	20112983	True	NM_001197287,NM_172194	chr14,chr14	-,+	OR11H2,OR4Q3	69565,102603
chr14:20112495-20112997	chr14	-	19452767	19452884	False	NM_001145442,NM_001013354	chr14,chr14	-,+	POTEM,OR11H12	567438,-75231
chr13:20810952-20812270	chr13	+	20811195	20812207	True	NM_001110221,NM_001110219,NM_001190965,NM_006783,NM_001110220	chr13,chr13,chr13,chr13,chr13	-,-,+,-,-	GJB6,GJB6,ZMYM2,GJB6,GJB6	-4661,-4661,-278272,-5823,-4661
chr3:195662583-195663963	chr3	+	195662654	195663166	True	NR_034088,NM_005781	chr3,chr3	+,-	LOC401109,TNK2	206340,-26774
chr5:31532854-31533310	chr5	+	31532878	31533047	True	NM_018356,NM_013235,NM_001100412	chr5,chr5,chr5	+,-,-	C5orf22,DROSHA,DROSHA	-556,-596,-596
chr17:79492061-79493120	chr17	+	79492763	79492883	True	NM_001077182,NM_012418,NR_037688	chr17,chr17,chr17	+,+,-	FSCN2,FSCN2,ACTG1	2533,2533,-12871
chr17:38209475-38209942	chr17	+	38209540	38209856	True	NM_014815,NM_001079518,NM_199334,NM_001190919,NM_001190918,NM_003250	chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,+,+,+	MED24,MED24,THRA,THRA,THRA,THRA	1083,1083,9211,8589,9211,9211
chr7:12624141-12624848	chr7	+	12624159	12624893	True	NM_033128,NM_001135924	chr7,chr7	+,-	SCIN,VWDE	4254,-180307
chr1:26633630-26634477	chr1	+	26633638	26634456	True	NM_001803,NM_183008,NM_001077262	chr1,chr1,chr1	+,-,-	CD52,UBXN11,UBXN11	9954,-443,-443
chr12:10469295-10470286	chr12	+	10469313	10470320	True	NM_007360,NM_007334,NM_002262	chr12,chr12,chr12	-,+,+	KLRK1,KLRD1,KLRD1	72383,-8953,-8953
chr10:30331517-30332740	chr10	+	30331661	30332515	True	NM_020848,NM_005204	chr10,chr10	-,+	KIAA1462,MAP3K8	16023,390350
chr1:62204866-62206124	chr1	+	62204987	62205934	True	NM_176877,NM_032027	chr1,chr1	+,-	INADL,TM2D1	2214,-13892
chr8:128482109-128484040	chr8	+	128482126	128483831	True	NM_001159542,NR_024393	chr8,chr8	+,-	POU5F1B,LOC727677	-54328,10603
chrX:103409905-103411058	chrX	+	103409956	103410940	True	NM_001012755,NM_207318	chrX,chrX	-,+	MCART6,FAM199X	-8248,360
chr2:211035275-211035580	chr2	+	211035315	211035547	True	NM_152519,NM_199229	chr2,chr2	-,+	C2orf67,RPE	554,-167992
chr20:6033358-6034217	chr20	+	6033729	6034205	True	NM_001127458,NM_152611	chr20,chr20	+,-	CRLS1,LRRN4	-45882,539
chr11:67029400-67029815	chr11	+	67029426	67029822	True	NM_001619,NM_021173	chr11,chr11	+,-	ADRBK1,POLD4	4082,91280
chr6:44233877-44235208	chr6	+	44234108	44235242	True	NM_001137560,NM_004556,NM_178148	chr6,chr6,chr6	+,-,-	TMEM151B,NFKBIE,SLC35B2	3237,-583,-8825
chr1:204807845-204808206	chr1	+	204807862	204808224	True	NM_201630,NM_015090	chr1,chr1	-,+	LRRN2,NFASC	-153265,-10138
chr16:19180391-19180665	chr16	+	19180407	19180714	True	NM_016524,NM_015092	chr16,chr16	+,-	SYT17,SMG1	-820,-242681
chrX:110032049-110032712	chrX	+	110032074	110032685	True	NM_001128166,NM_145234,NM_001143981,NM_001143982,NM_001143983	chrX,chrX,chrX,chrX,chrX	+,-,-,-,-	PAK3,CHRDL1,CHRDL1,CHRDL1,CHRDL1	154827,6452,6662,6662,6662
chr7:98805417-98805740	chr7	+	98805568	98805734	True	NM_001145715,NR_002147	chr7,chr7	-,+	KPNA7,MYH16	-479,65189
chr1:151740700-151741677	chr1	+	151740751	151741123	True	NM_016178,NM_001134939,NM_031420	chr1,chr1,chr1	+,+,-	OAZ3,OAZ3,MRPL9	-1685,-5371,-4711
chr12:113625944-113626705	chr12	+	113626393	113626453	True	NM_024072,NM_001111322,NM_032848	chr12,chr12,chr12	-,-,+	DDX54,DDX54,C12orf52	-3109,-3109,-2889
chr3:12198943-12199658	chr3	+	12199042	12199640	True	NM_003256,NM_005037	chr3,chr3	-,+	TIMP4,PPARG	1261,129708
chr18:47722765-47723315	chr18	+	47722839	47723302	True	NM_001039535,NM_001080467	chr18,chr18	+,-	SKA1,MYO5B	178089,-1388
chr11:61596340-61596558	chr11	+	61596487	61596607	True	NM_013402,NM_004265	chr11,chr11	-,+	FADS1,FADS2	-11958,-825
chr2:119915137-119915435	chr2	+	119915213	119915433	True	NM_001008410,NM_182528	chr2,chr2	+,-	STEAP3,C1QL2	65950,1088
chr8:99831625-99832206	chr8	+	99831625	99832251	True	NM_006281,NM_001142462	chr8,chr8	-,+	STK3,OSR2	5708,124379
chr19:36347189-36347407	chr19	+	36347256	36347326	True	NM_199180,NM_004646,NM_032123,NM_199179	chr19,chr19,chr19,chr19	+,-,+,+	KIRREL2,NPHS1,KIRREL2,KIRREL2	483,-4361,483,483
chr10:97049059-97049287	chr10	+	97049124	97049335	True	NM_207321,NM_020992	chr10,chr10	+,-	C10orf129,PDLIM1	-95218,1496
chr15:43986472-43987459	chr15	+	43986628	43987454	True	NM_001015001,NM_172097	chr15,chr15	+,-	CKMT1A,CATSPER2	-1595,-45589
chr15:43986472-43987459	chr15	+	43886796	43887622	False	NM_001190214,NM_014659,NM_001130858,NM_001130859,NM_020990	chr15,chr15,chr15,chr15,chr15	-,-,-,-,+	PPIP5K1,PPIP5K1,PPIP5K1,PPIP5K1,CKMT1B	-4345,-9706,-4345,-4345,-1595
chr17:73877183-73877906	chr17	+	73877503	73877799	True	NM_033452,NM_001080419	chr17,chr17	-,+	TRIM47,UNK	-2847,-96873
chr7:149530436-149531996	chr7	+	149530609	149531871	True	NM_001099220,NR_027040	chr7,chr7	+,-	ZNF862,LOC401431	3637,39130
chr11:32113902-32114117	chr11	+	32113905	32114155	True	NM_001127612,NM_002901	chr11,chr11	-,+	PAX6,RCN1	-274396,-1479
chr11:57192249-57192743	chr11	+	57192393	57192787	True	NM_199329,NM_014096,NM_178570,NM_017611	chr11,chr11,chr11,chr11	-,-,+,-	SLC43A3,SLC43A3,RTN4RL2,SLC43A3	1857,1786,35551,2316
chr7:102118723-102119032	chr7	+	102118769	102119029	True	NM_006234,NM_152892	chr7,chr7	-,+	POLR2J,LRWD1	402,-13430
chr7:102118723-102119032	chr7	+	44058370	44058434	False	NM_175064,NR_003655	chr7,chr7	+,-	SPDYE1,POLR2J4	-17932,364
chr7:102118723-102119032	chr7	+	102212432	102212693	False	NM_001166339,NM_001097615	chr7,chr7	+,-	SPDYE2L,POLR2J3	-20804,425
chr7:102118723-102119032	chr7	+	102311512	102311773	False	NM_032959,NM_001166339	chr7,chr7	-,+	POLR2J2,SPDYE2L	459,-20791
chr6:170870891-170871220	chr6	+	170870891	170871241	True	NM_001172085,NM_002793	chr6,chr6	+,-	TBP,PSMB1	-7521,-8474
chr10:124189149-124189436	chr10	+	124189162	124189460	True	NM_001010912,NR_037506	chr10,chr10	-,+	C10orf120,MIR3941	269928,-12732
chr6:4077024-4078378	chr6	+	4077302	4078206	True	NM_001085401,NM_173563	chr6,chr6	+,-	C6orf201,C6orf146	1233,1301
chr10:85995974-85996998	chr10	+	85996258	85996951	True	NM_001012720,NM_001012722,NM_002921,NM_015613	chr10,chr10,chr10,chr10	+,+,+,-	RGR,RGR,RGR,LRIT1	7857,7857,7857,4317
chr19:44771828-44773740	chr19	+	44771915	44773253	True	NM_004234,NM_181756	chr19,chr19	-,+	ZNF235,ZNF233	35975,-7890
chrX:119003965-119005049	chrX	+	119004145	119005096	True	NM_006978,NM_004541	chrX,chrX	-,+	RNF113A,NDUFA1	745,637
chr2:99791347-99792910	chr2	+	99791564	99792757	True	NM_145212,NR_028356,NM_138798	chr2,chr2,chr2	+,+,-	MRPL30,MRPL30,MITD1	4784,4784,4786
chr5:70197848-70198522	chr5	+	70198147	70198323	True	NM_001178087,NM_022968,NM_004536,NM_021967,NM_022978	chr5,chr5,chr5,chr5,chr5	+,+,-,+,+	SERF1B,SERF1A,NAIP,SERF1A,SERF1B	-1702,-1708,122668,-1708,-1702
chr5:70197848-70198522	chr5	+	69322729	69322905	False	NM_001178087,NM_022968,NR_024054,NM_021967,NM_022978	chr5,chr5,chr5,chr5,chr5	+,+,-,+,+	SERF1B,SERF1A,LOC100170939,SERF1A,SERF1B	-1702,-1708,198767,-1708,-1702
chr19:57702018-57702440	chr19	+	57702043	57702349	True	NM_001012729,NM_003417	chr19,chr19	-,+	DUXA,ZNF264	-23187,518
chr5:180629725-180630577	chr5	+	180629859	180630469	True	NM_203295,NM_203294,NM_203297,NM_203296,NM_033342,NM_203293,NM_033549	chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,-,-,+	TRIM7,TRIM7,TRIM7,TRIM7,TRIM7,TRIM7,TRIM41	921,921,-1929,921,1758,1758,19836
chr16:12144871-12146164	chr16	+	12145429	12146106	True	NM_001080530,NM_001130007	chr16,chr16	+,-	SNX29,GSPT1	-52,-134910
chr5:126641878-126642782	chr5	+	126641883	126642615	True	NM_032446,NM_001164478	chr5,chr5	+,-	MEGF10,FLJ44606	-15478,-232699
chr20:23856084-23856833	chr20	+	23856133	23856873	True	NM_001900,NR_001279	chr20,chr20	-,+	CST5,CSTT	3557,-356401
chr16:56713769-56714016	chr16	+	56713791	56714051	True	NM_005952,NM_005950,NR_003669	chr16,chr16,chr16	+,-,+	MT1X,MT1G,MT1IP	2330,-11814,-4193
chr19:53792609-53793606	chr19	+	53792934	53793640	True	NM_001195187,NM_033341	chr19,chr19	+,-	LOC646508,BIRC8	-8174,1285
chr12:31477887-31478158	chr12	+	31477949	31478185	True	NM_021238,NR_026806,NM_001135812,NM_001135811	chr12,chr12,chr12,chr12	-,+,-,-	FAM60A,FLJ13224,FAM60A,FAM60A	986,-750,1024,986
chr15:78237776-78238357	chr15	+	78237993	78238330	True	NM_001101404,NR_027024	chr15,chr15	+,-	SH2D7,LOC645752	146596,-18805
chr2:102315315-102316295	chr2	+	102315363	102316267	True	NM_145687,NM_145686,NM_004834,NM_001145664	chr2,chr2,chr2,chr2	+,+,+,-	MAP4K4,MAP4K4,MAP4K4,RFX8	-926,-926,-926,-224198
chr19:58400043-58400423	chr19	+	58400059	58400405	True	NM_001144989,NM_032828	chr19,chr19	-,+	ZNF814,ZNF587	87,-38929
chr16:8768073-8768303	chr16	+	8768116	8768176	True	NM_020686,NM_015421	chr16,chr16	+,-	ABAT,TMEM186	267,123379
chr21:37840729-37841351	chr21	+	37840922	37841400	True	NM_012130,NM_005441	chr21,chr21	-,+	CLDN14,CHAF1B	-2197,-83292
chr4:5990022-5990263	chr4	+	5990021	5990287	True	NR_037863,NM_001014809	chr4,chr4	+,-	LOC285484,CRMP1	212172,-95236
chr5:137774989-137775292	chr5	+	137774999	137775231	True	NM_004730,NM_016606	chr5,chr5	-,+	ETF1,REEP2	103751,-274
chr19:20989038-20990477	chr19	+	20989517	20990380	True	NR_034060,NM_145297	chr19,chr19	+,-	ZNF85,ZNF626	115678,-145115
chr6:116362233-116362644	chr6	+	116362270	116362628	True	NM_002031,NR_027338	chr6,chr6	-,+	FRK,TPI1P3	19347,-2438
chr3:11624531-11625118	chr3	+	11624566	11625061	True	NM_006395,NM_001128220	chr3,chr3	+,-	ATG7,VGLL4	-310608,-730
chrY:15816153-15818018	chrY	+	15816167	15818004	True	NM_182660,NM_004202	chrY,chrY	-,+	UTY,TMSB4Y	-223617,-771
chr16:69165352-69165694	chr16	+	69165433	69165721	True	NM_001039690,NR_033227,NM_001040146,NM_032830	chr16,chr16,chr16,chr16	-,-,-,+	CHTF8,CHTF8,CHTF8,CIRH1A	822,822,391,777
chr17:7323901-7324749	chr17	+	7323941	7324783	True	NM_152766,NM_199339,NM_175734	chr17,chr17,chr17	-,+,+	C17orf61,SPEM1,C17orf74	-16491,-313,4151
chr1:78349510-78350661	chr1	+	78349684	78350158	True	NM_144573,NM_003902,NM_001172309	chr1,chr1,chr1	+,-,+	NEXN,FUBP1,NEXN	4041,94671,4041
chr19:15051880-15052713	chr19	+	15051996	15052684	True	NM_005071,NM_012377	chr19,chr19	-,+	SLC1A6,OR7C2	31096,-138
chr19:983555-983759	chr19	+	983575	983706	True	NM_024100,NM_001033026	chr19,chr19	+,-	WDR18,C19orf6	621,37488
chr20:897058-897543	chr20	+	897112	897542	True	NM_015985,NM_031424	chr20,chr20	-,+	ANGPT4,FAM110A	-152,-71878
chr10:11625910-11627255	chr10	+	11626202	11627182	True	NM_014688,NM_024693	chr10,chr10	-,+	USP6NL,ECHDC3	26555,157173
chr1:177140540-177142174	chr1	+	177140850	177142169	True	NM_207108,NM_004319,NM_021165	chr1,chr1,chr1	-,-,+	ASTN1,ASTN1,FAM5B	-6826,-6826,-268
chr3:50273980-50275398	chr3	+	50274020	50275385	True	NM_002070,NM_001166425,NM_006764	chr3,chr3,chr3	+,+,-	GNAI2,GNAI2,IFRD2	-424,8940,54691
chr16:57127186-57127928	chr16	+	57127223	57127799	True	NM_152727,NM_024946	chr16,chr16	+,-	CPNE2,FAM192A	-820,92227
chr6:88118318-88119022	chr6	+	88118351	88118876	True	NM_001031743,NM_198568	chr6,chr6	+,-	C6orf165,GJB7	-712,-79355
chr20:60643127-60643358	chr20	+	60643254	60643386	True	NM_144703,NM_003185	chr20,chr20	+,-	LSM14B,TAF4	54130,-2388
chr3:142608206-142608485	chr3	+	142608447	142608531	True	NM_013363,NM_001080415	chr3,chr3	-,+	PCOLCE2,U2SURP	-402,111840
chr14:31343114-31343451	chr14	+	31343198	31343364	True	NM_004086,NM_001135058,NR_030354	chr14,chr14,chr14	+,+,-	COCH,COCH,MIR624	376,376,140634
chr22:20105284-20105509	chr22	+	20105284	20105532	True	NM_182984,NM_022727,NM_002882	chr22,chr22,chr22	-,-,+	TRMT2A,TRMT2A,RANBP1	-516,-516,-311
chr10:114134876-114136051	chr10	+	114134882	114135818	True	NM_016234,NR_028134,NM_203379,NM_203380	chr10,chr10,chr10,chr10	+,-,+,+	ACSL5,GUCY2GP,ACSL5,ACSL5	137,-18529,-1017,-10
chr6:143268847-143269709	chr6	+	143268905	143269647	True	NM_016108,NM_006734	chr6,chr6	+,-	AIG1,HIVEP2	112375,-2567
chr5:112869168-112869882	chr5	+	112869340	112869888	True	NM_022828,NM_001085377	chr5,chr5	+,-	YTHDC2,MCC	-20011,-44813
chr19:41860253-41860565	chr19	+	41860277	41860547	True	NM_030578,NM_001098825,NM_000660	chr19,chr19,chr19	-,+,-	B9D2,TMEM91,TGFB1	9581,9323,-446
chr19:45872370-45873352	chr19	+	45872485	45873346	True	NM_001130867,NM_177417,NM_000400	chr19,chr19,chr19	-,+,-	ERCC2,KLC3,ERCC2	549,-28538,549
chr17:17138909-17140268	chr17	+	17139000	17139952	True	NM_144997,NM_020201,NM_144606	chr17,chr17,chr17	-,+,-	FLCN,NT5M,FLCN	600,66727,600
chr13:53309391-53310422	chr13	+	53309394	53309966	True	NR_031582,NM_007015,NM_001011705	chr13,chr13,chr13	+,-,-	MIR759,LECT1,LECT1	74218,4031,4031
chr17:61991131-61992041	chr17	+	61991316	61992040	True	NM_001318,NM_022579,NM_022581,NM_000515,NM_022560,NM_022580,NM_022562,NM_022561,NR_002947,NM_022559	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,-,-,-,+,-	CSHL1,CSHL1,CSHL1,GH1,GH1,CSHL1,GH1,GH1,TCAM1P,GH1	-2698,-2698,-2698,4208,4208,-2698,4208,4208,-56991,4208
chr11:94275351-94275749	chr11	+	94275352	94275796	True	NM_005591,NM_002033	chr11,chr11	-,+	MRE11A,FUT4	-48312,1220
chr4:79698069-79699822	chr4	+	79698106	79699467	True	NM_198892,NM_017593,NM_001040202	chr4,chr4,chr4	+,+,-	BMP2K,BMP2K,PAQR3	-625,-625,161173
chr20:61487980-61488548	chr20	+	61488083	61488529	True	NM_006602,NM_080750	chr20,chr20	-,+	TCFL5,DPH3P1	4636,-11658
chr16:29912451-29912665	chr16	+	29912464	29912682	True	NM_012410,NM_181718,NM_001114100,NM_001114099,NM_201575	chr16,chr16,chr16,chr16,chr16	-,+,-,-,-	SEZ6L2,ASPHD1,SEZ6L2,SEZ6L2,SEZ6L2	-1884,-368,-1884,-1884,-1884
chr1:109289460-109289676	chr1	+	109289481	109289557	True	NM_144584,NM_007269	chr1,chr1	-,+	HENMT1,STXBP3	-85333,-247
chr6:159277513-159277810	chr6	+	159277525	159277693	True	NR_028496,NM_001195032	chr6,chr6	-,+	OSTCL,C6orf99	1021,31925
chr2:182544359-182545207	chr2	+	182544472	182545202	True	NM_002500,NM_001130445	chr2,chr2	-,+	NEUROD1,SSFA2	241,211269
chr20:30135250-30136097	chr20	+	30135271	30135974	True	NM_001037500,NR_003677	chr20,chr20	-,+	DEFB124,PSIMCT-1	-74455,-137
chr1:173795216-173795843	chr1	+	173795420	173795892	True	NM_033319,NM_001171182,NM_001127181,NM_018122	chr1,chr1,chr1,chr1	-,-,-,+	CENPL,CENPL,CENPL,DARS2	-1643,-2150,-1643,-1683
chr14:23526147-23526496	chr14	+	23526308	23526518	True	NM_144985,NM_022478,NM_001099780	chr14,chr14,chr14	-,-,+	CDH24,CDH24,PSMB11	279,279,-14983
chr17:5341448-5342142	chr17	+	5341677	5342125	True	NR_027685,NM_001212	chr17,chr17	+,-	RPAIN,C1QBP	-18769,396
chr20:34701653-34702824	chr20	+	34701761	34702736	True	NM_177996,NR_027451	chr20,chr20	+,-	EPB41L1,LOC647979	-1464,-62879
chr16:88718084-88718304	chr16	+	88718142	88718350	True	NM_000101,NR_024402	chr16,chr16	-,+	CYBA,MGC23284	-685,11430
chr4:965981-966317	chr4	+	966077	966345	True	NM_000203,NM_001347	chr4,chr4	+,-	IDUA,DGKQ	14439,1049
chr1:47124835-47126835	chr1	+	47124966	47126589	True	NM_022745,NM_001042546,NM_001145474	chr1,chr1,chr1	-,-,+	ATPAF1,ATPAF1,C1orf223	7573,7573,10910
chr2:217219988-217221465	chr2	+	217220098	217221166	True	NM_014140,NM_020814	chr2,chr2	+,-	SMARCAL1,MARCH4	55970,15634
chr9:41434023-41434907	chr9	+	41434191	41434776	True	NM_015667	chr9	+	FAM75A7	65902
chr9:41434023-41434907	chr9	-	65575571	65576170	False	NR_024496,NM_015667	chr9,chr9	+,-	LOC442421,FAM75A7	918098,-65961
chr9:41434023-41434907	chr9	+	40634259	40634309	False	NM_001083124,NM_033160	chr9,chr9	+,-	FAM75A3,ZNF658	65981,157853
chr9:41434023-41434907	chr9	+	39289342	39289406	False	NM_033655,NM_001085452	chr9,chr9	-,+	CNTNAP3,FAM75A1	-1042,66292
chr9:41434023-41434907	chr9	+	39818587	39818651	False	NR_003528,NM_001085452	chr9,chr9	-,+	LOC653501,FAM75A1	-354061,66323
chr12:53400705-53401053	chr12	+	53400810	53401072	True	NM_001417,NR_033854	chr12,chr12	+,-	EIF4B,LOC283335	-799,47200
chr7:100493940-100494317	chr7	+	100494065	100494323	True	NM_000665,NM_015908,NM_015831,NM_001015072	chr7,chr7,chr7,chr7	-,+,-,-	ACHE,SRRT,ACHE,UFSP1	-524,-21415,-524,-6726
chrX:50212134-50212400	chrX	+	50212133	50212341	True	NM_033670,NM_001013742	chrX,chrX	+,-	CCNB3,DGKK	-184644,1430
chr17:41995199-41995487	chr17	+	41995285	41995397	True	NR_026770,NM_005374	chr17,chr17	+,-	C17orf88,MPP2	-760,-10172
chr8:55016581-55016843	chr8	+	55016638	55016702	True	NM_014175,NM_006330	chr8,chr8	+,-	MRPL15,LYPLA1	31078,-2061
chr7:129831824-129833301	chr7	+	129831828	129832947	True	NM_145268,NM_032842	chr7,chr7	+,-	C7orf45,TMEM209	14756,12447
chr20:52825036-52825294	chr20	+	52825035	52825329	True	NM_001128915,NM_002623	chr20,chr20	-,+	CYP24A1,PFDN4	-34519,-584
chr11:60633914-60634448	chr11	+	60633984	60634470	True	NM_004778,NM_207341	chr11,chr11	-,+	GPR44,ZP1	-10540,544
chr5:39721016-39721599	chr5	+	39721104	39721580	True	NM_001343,NM_003999	chr5,chr5	-,+	DAB2,OSMR	-295769,-875054
chr4:54243698-54244012	chr4	+	54243754	54244054	True	NM_001134938,NM_001134937,NM_030917,NM_152540	chr4,chr4,chr4,chr4	+,+,+,-	FIP1L1,FIP1L1,FIP1L1,SCFD2	15,15,15,-11512
chr2:85805636-85806235	chr2	+	85805680	85806218	True	NM_003761,NM_001142269,NM_006634	chr2,chr2,chr2	+,-,+	VAMP8,GGCX,VAMP5	-1117,-17023,5312
chr8:126102800-126103589	chr8	+	126102934	126103603	True	NM_014846,NM_173685	chr8,chr8	-,+	KIAA0196,NSMCE2	509,479
chr11:10562524-10562754	chr11	+	10562596	10562786	True	NM_016422,NR_034093,NR_034094	chr11,chr11,chr11	-,+,+	RNF141,LOC100129827,LOC100129827	38,43,0
chr12:511131-512043	chr12	+	511310	512077	True	NM_001130146,NM_001042603,NM_032358	chr12,chr12,chr12	+,-,+	CCDC77,KDM5A,CCDC77	-620,-12690,-620
chr17:72745992-72746267	chr17	+	72746093	72746165	True	NM_004252,NM_015654,NR_037409	chr17,chr17,chr17	+,-,+	SLC9A3R1,NAT9,MIR3615	-1381,26355,-1392
chr21:33959710-33960353	chr21	+	33959713	33960358	True	NM_058187,NM_144659	chr21,chr21	+,-	C21orf63,TCP10L	-175012,-1868
chr19:10152169-10153031	chr19	+	10152269	10153011	True	NM_015719,NR_027300	chr19,chr19	-,+	COL5A3,C3P1	-31122,-288
chr13:111570795-111572002	chr13	+	111570844	111571757	True	NM_017664,NM_001113511	chr13,chr13	-,+	ANKRD10,ARHGEF7	-3428,195866
chr12:54982971-54984577	chr12	+	54983226	54984534	True	NM_006741,NM_001165975	chr12,chr12	-,+	PPP1R1A,PDE1B	-783,-28179
chr8:145048437-145048765	chr8	+	145048473	145048813	True	NM_201378,NM_000837,NM_000445	chr8,chr8,chr8	-,+,-	PLEC,GRINA,PLEC	-776,15412,2150
chr6:159588261-159589021	chr6	+	159588355	159588889	True	NM_032532,NM_138810	chr6,chr6	+,-	FNDC1,TAGAP	1539,-122171
chr9:90631619-90631968	chr9	+	90631647	90631772	True	NM_178432,NM_001145124	chr9,chr9	-,+	CDK20,FAM75C1	-41952,-98821
chr22:50944370-50944573	chr22	+	50944387	50944607	True	NM_014551,NM_033200,NM_001185011,NM_152299	chr22,chr22,chr22,chr22	+,-,+,+	NCAPH2,LMF2,NCAPH2,NCAPH2	2037,1578,2037,2037
chr10:15413435-15414181	chr10	+	15413647	15414219	True	NM_183005,NM_001010924	chr10,chr10	+,-	RPP38,FAM171A1	-274516,-589
chr16:3020498-3020733	chr16	+	3020639	3020781	True	NM_172229,NM_152341,NM_182687,NM_004203,NM_024507	chr16,chr16,chr16,chr16,chr16	+,+,-,-,+	KREMEN2,PAQR4,PKMYT1,PKMYT1,KREMEN2	-6475,-1350,9809,9809,-6475
chr11:67889250-67889487	chr11	+	67889264	67889446	True	NM_001277,NM_212469,NM_006053	chr11,chr11,chr11	-,-,+	CHKA,CHKA,TCIRG1	-406,-406,-78868
chr17:12919121-12919494	chr17	+	12919165	12919511	True	NM_014859,NM_018127,NM_001165962,NM_173717	chr17,chr17,chr17,chr17	+,-,-,-	ARHGAP44,ELAC2,ELAC2,ELAC2	-226387,1920,1920,1920
chr1:205718543-205718784	chr1	+	205718643	205718833	True	NM_022731,NM_181644	chr1,chr1	-,+	NUCKS1,MFSD4	589,-180582
chr5:138942501-138943237	chr5	+	138942635	138943163	True	NM_003339,NM_181838,NM_198282	chr5,chr5,chr5	+,+,-	UBE2D2,UBE2D2,TMEM173	-1935,-1935,-80292
chr5:53626963-53628765	chr5	+	53627225	53628456	True	NM_006308,NM_019087	chr5,chr5	+,-	HSPB3,ARL15	122974,-20822
chr20:61866611-61866876	chr20	+	61866620	61866834	True	NM_022161,NM_152864,NM_139317,NR_036163,NM_017798	chr20,chr20,chr20,chr20,chr20	+,-,+,+,-	BIRC7,NKAIN4,BIRC7,MIR3196,YTHDF1	441,19108,441,3296,-19082
chr8:67525396-67525675	chr8	+	67525447	67525565	True	NM_019607,NM_001080416,NM_001144755	chr8,chr8,chr8	+,-,-	C8orf44,MYBL1,MYBL1	54221,-25,-25
chr16:85215789-85216102	chr16	+	85215816	85216142	True	NR_033984,NM_198491	chr16,chr16	+,-	LOC400548,FAM92B	-45111,-69702
chr10:69836146-69836600	chr10	+	69836185	69836608	True	NM_015601,NM_032578,NM_022079	chr10,chr10,chr10	-,+,-	HERC4,MYPN,HERC4	-1082,32641,-1082
chr9:37647400-37649039	chr9	+	37647704	37648930	True	NM_014907,NM_001134485	chr9,chr9	+,-	FRMPD1,TOMM5	2121,-55068
chr18:47086291-47086930	chr18	+	47086305	47086782	True	NM_001035006,NM_006033	chr18,chr18	-,+	RPL17,LIPG	-67370,1644
chr17:9479222-9480030	chr17	+	9479231	9479979	True	NM_145054,NR_033656,NM_001080556,NM_004853	chr17,chr17,chr17,chr17	+,-,+,-	WDR16,STX8,WDR16,STX8	-36,-34,-36,-34
chr2:34269513-34270640	chr2	+	34269633	34270648	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-530742,-316349
chr19:842709-843305	chr19	+	842866	843303	True	NM_001972,NM_002777,NM_024888	chr19,chr19,chr19	+,+,-	ELANE,PRTN3,LPPR3	8987,-1932,-20914
chr3:195634202-195635429	chr3	+	195634407	195635190	True	NM_001098516,NM_005781	chr3,chr3	+,-	MUC20,TNK2	-183360,741
chr3:39096831-39097906	chr3	+	39097064	39097943	True	NM_020839,NM_031899	chr3,chr3	+,-	WDR48,GORASP1	-3608,51238
chr19:13107477-13107995	chr19	+	13107573	13108011	True	NM_002501,NM_052850	chr19,chr19	+,-	NFIX,GADD45GIP1	-1040,-39523
chr11:76775340-76775669	chr11	+	76775349	76775687	True	NM_182833,NM_004055	chr11,chr11	-,+	GDPD4,CAPN5	222826,2304
chr4:55990997-55991406	chr4	+	55990996	55991344	True	NM_024592,NM_002253	chr4,chr4	+,-	SRD5A3,KDR	221043,468
chr10:85898501-85898840	chr10	+	85898599	85898896	True	NM_001017924,NM_014394	chr10,chr10	-,+	LRIT2,GHITM	86449,288
chr14:92500621-92502080	chr14	+	92500787	92501375	True	NM_004239,NM_017437	chr14,chr14	-,+	TRIP11,CPSF2	5078,86922
chr19:17514741-17515151	chr19	+	17514927	17515017	True	NM_004335,NM_138401	chr19,chr19	-,+	BST2,FAM125A	1417,15894
chr6:21665673-21666018	chr6	+	21665791	21666067	True	NR_034143,NR_015410	chr6,chr6	-,+	LOC729177,FLJ22536	481405,607
chr8:52799908-52800392	chr8	+	52799934	52800225	True	NM_052937,NM_005285	chr8,chr8	-,+	PCMTD1,NPBWR1	11569,1052242
chr10:1779970-1781651	chr10	+	1780121	1781455	True	NR_033387,NM_018702	chr10,chr10	+,-	NCRNA00168,ADARB2	-211347,-403
chr16:81480108-81480620	chr16	+	81480285	81480582	True	NM_001076780,NM_198390	chr16,chr16	-,+	PKD1L2,CMIP	-226310,-1561
chr15:83622672-83623821	chr15	+	83622887	83623534	True	NM_031452,NM_004839,NM_199330,NM_199331,NM_199332	chr15,chr15,chr15,chr15,chr15	+,-,-,-,-	FAM103A1,HOMER2,HOMER2,HOMER2,HOMER2	31460,-1414,-1414,-1414,-1414
chr1:249209306-249210332	chr1	+	249209314	249210257	True	NM_001193328,NM_001017434	chr1,chr1	-,+	ZNF692,PGBD2	-55999,-8924
chr10:17499455-17500850	chr10	+	17499470	17500680	True	NM_001004470,NR_034129	chr10,chr10	-,+	ST8SIA6,LOC100128098	-3216,-70586
chr12:69632970-69633181	chr12	+	69632979	69633165	True	NM_007007,NR_031692	chr12,chr12	+,-	CPSF6,MIR1279	151,33883
chr3:183874188-183874460	chr3	+	183874207	183874493	True	NM_005787,NM_004423	chr3,chr3	-,+	ALG3,DVL3	92316,-974
chr3:52929732-52930675	chr3	+	52929742	52930664	True	NM_001198974,NM_198563,NM_002217	chr3,chr3,chr3	-,-,+	TMEM110-MUSTN1,TMEM110,ITIH3	983,983,-101009
chr17:34396310-34397084	chr17	+	34396504	34396788	True	NM_002988,NM_002983	chr17,chr17	+,-	CCL18,CCL3	-4912,20768
chr17:638545-639069	chr17	+	638672	638932	True	NM_015721,NM_024792	chr17,chr17	-,+	GEMIN4,FAM57A	16619,-2892
chr15:25095755-25096771	chr15	+	25095755	25096820	True	NM_022805,NM_130838	chr15,chr15	+,-	SNRPN,UBE3A	4877,553883
chr11:70245212-70245578	chr11	+	70245269	70245626	True	NM_133266,NM_138565,NM_005231,NM_001184740	chr11,chr11,chr11,chr11	-,+,+,+	SHANK2,CTTN,CTTN,CTTN	262347,-708,-708,-708
chr1:113255061-113255487	chr1	+	113255068	113255446	True	NM_001042678,NM_001042679,NM_175744,NM_001004440,NM_005167,NM_182759	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,+	RHOC,RHOC,RHOC,FAM19A3,PPM1J,FAM19A3	-5043,-5390,-5043,7742,2554,7742
chr6:46601448-46603422	chr6	+	46601630	46603259	True	NM_016593,NM_001204051	chr6,chr6	-,+	CYP39A1,SLC25A27	17318,17392
chr18:53585804-53586877	chr18	+	53585867	53586739	True	NM_003199,NM_015285	chr18,chr18	-,+	TCF4,WDR7	-330007,731876
chr2:112810602-112812131	chr2	+	112810915	112811807	True	NM_022662,NM_032824	chr2,chr2	-,+	ANAPC1,TMEM87B	-169174,992
chr2:28719283-28720879	chr2	+	28719498	28720578	True	NM_017910,NM_153021,NM_001170585	chr2,chr2,chr2	-,+,+	TRMT61B,PLB1,PLB1	372647,-625,-625
chr1:161365827-161366420	chr1	+	161366163	161366219	True	NM_001013625,NM_003001	chr1,chr1	-,+	C1orf192,SDHC	-28499,-82050
chr16:29831756-29832066	chr16	+	29831792	29832068	True	NM_006319,NM_024516,NM_017458,NM_145239,NM_005115	chr16,chr16,chr16,chr16,chr16	-,+,+,+,+	CDIPT,C16orf53,MVP,PRRT2,MVP	42560,-4315,-128,-8434,-128
chr2:88989048-88989903	chr2	+	88989047	88989726	True	NM_144563,NM_004836	chr2,chr2	+,-	RPIA,EIF2AK3	1449,-61953
chr17:5139495-5139723	chr17	+	5139625	5139705	True	NM_207103,NR_034082	chr17,chr17	-,+	C17orf87,LOC100130950	-1542,-44297
chr16:53732737-53733585	chr16	+	53733383	53733535	True	NM_001080432,NM_015272,NM_001127897	chr16,chr16,chr16	+,-,-	FTO,RPGRIP1L,RPGRIP1L	4339,4298,4298
chr11:125934218-125936197	chr11	+	125934438	125936230	True	NM_016952,NM_024556	chr11,chr11	-,+	CDON,FAM118B	-1251,145388
chrY:26088064-26089562	chrY	+	26088077	26089569	True	NR_001526,NR_002176,NR_001524	chrY,chrY,chrY	+,-,-	TTTY17A,TTTY3B,TTTY3	541909,-308,-308
chrY:26088064-26089562	chrY	-	27872836	27874328	False	NR_002179,NR_002176,NR_001524	chrY,chrY,chrY	-,+,+	TTTY17C,TTTY3B,TTTY3	-541916,308,308
chr3:3099402-3100124	chr3	+	3099628	3099880	True	NM_000564,NM_182916	chr3,chr3	-,+	IL5RA,TRNT1	52236,68719
chr1:860117-860352	chr1	+	860120	860308	True	NM_152486,NR_026874	chr1,chr1	+,-	SAMD11,FLJ39609	812,-5303
chrX:119749569-119751137	chrX	+	119749573	119750949	True	NM_001137554,NM_001011551	chrX,chrX	+,-	MCTS1,C1GALT1C1	-11072,13116
chr11:129936052-129937844	chr11	+	129936185	129937864	True	NR_024516,NR_024515,NM_001642,NM_001142278,NM_199437,NM_001142277,NM_001142276	chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,-,+,+	APLP2,APLP2,APLP2,APLP2,PRDM10,APLP2,APLP2	1851,1851,1851,1851,-63455,1851,1851
chr5:159345179-159345987	chr5	+	159345190	159346030	True	NM_000679,NM_052927	chr5,chr5	+,-	ADRA1B,PWWP2A	-1501,200472
chr8:141468289-141468579	chr8	+	141468368	141468603	True	NM_001160372,NM_017444,NM_031466	chr8,chr8,chr8	-,+,-	TRAPPC9,CHRAC1,TRAPPC9	-507,52797,125
chr5:128795339-128795668	chr5	+	128795345	128795587	True	NM_133638,NM_001999	chr5,chr5	+,-	ADAMTS19,FBN2	515,-921610
chr3:197882500-197883889	chr7	-	31769	33010	False	NM_002607,NM_020223	chr7,chr7	-,+	PDGFA,FAM20C	526521,159958
chr3:197882500-197883889	chr3	+	197882589	197883830	True	NR_003291	chr3	-	LOC348840	-75047
chr7:20875020-20875452	chr7	+	20875150	20875349	True	NM_198956,NR_026673	chr7,chr7	-,+	SP8,RPL23P8	-48642,-8290
chr1:32687543-32687796	chr1	+	32687592	32687805	True	NM_003757,NM_019118	chr1,chr1	+,-	EIF3I,TMEM234	165,171
chr8:74884580-74885023	chr8	+	74884624	74885063	True	NM_001204858,NM_001204859,NM_001204857,NM_017866,NM_001204861,NR_033334,NM_001204863,NM_001204862,NM_005648,NM_001204860,NM_001204864,NM_001040613	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,+,-,+,-,-,-,-,-,+	TCEB1,TCEB1,TCEB1,TMEM70,TCEB1,TMEM70,TCEB1,TCEB1,TCEB1,TCEB1,TCEB1,TMEM70	-102,-102,-102,3313,-481,3313,-102,-481,-102,-102,-102,3313
chr7:150756278-150756581	chr7	+	150756416	150756520	True	NM_001164410,NM_001199693,NM_001199692,NM_003040,NM_004935,NM_001199694	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,-,+	CDK5,SLC4A2,SLC4A2,SLC4A2,CDK5,SLC4A2	-1364,3113,-1168,136,-1364,3218
chr6:32547802-32548551	chr6	+	32547976	32548222	True	NM_002124,NM_002122	chr6,chr6	-,+	HLA-DRB1,HLA-DQA1	9390,56960
chr1:162760354-162760612	chr10	+	38645214	38645402	False	NR_027269,NR_003086	chr10,chr10	-,+	SEPT7L,HSD17B7P2	46428,-27
chr1:162760354-162760612	chr1	+	162760422	162760610	True	NM_178550,NM_016371	chr1,chr1	-,+	C1orf110,HSD17B7	78045,23
chr12:110836478-110836916	chr12	+	110836763	110836831	True	NM_001137664,NM_016238,NM_013300	chr12,chr12,chr12	-,-,+	ANAPC7,ANAPC7,C12orf24	4760,4760,69400
chr1:11715604-11716169	chr1	+	11715627	11716213	True	NM_001014765,NM_018438,NM_012168,NM_033182,NM_183412,NM_183413	chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,+,+,+	FBXO44,FBXO6,FBXO2,FBXO44,FBXO44,FBXO44	-764,7936,-739,-764,-1246,-764
chr1:228868361-228869289	chr1	+	228868367	228868995	True	NM_033445,NM_021205	chr1,chr1	-,+	HIST3H2A,RHOU	-222807,1828
chr1:44819537-44820564	chr1	+	44819584	44820462	True	NM_018150,NM_024066	chr1,chr1	+,-	RNF220,ERI3	50497,527
chr16:3088415-3089381	chr16	+	3088422	3089234	True	NM_001103175,NM_022468	chr16,chr16	-,+	CCDC64B,MMP25	-2880,7447
chr1:200861052-200861339	chr1	+	200861155	200861305	True	NM_001142569,NM_018265,NM_017596	chr1,chr1,chr1	+,+,-	C1orf106,C1orf106,KIF21B	2693,-567,131573
chr7:148130065-148131739	chr7	+	148130067	148131678	True	NM_145304,NM_001203249	chr7,chr7	+,-	C7orf33,EZH2	155978,448973
chr15:43400718-43401362	chr15	+	43400718	43401299	True	NM_024956,NM_174916	chr15,chr15	+,-	TMEM62,UBR1	24422,-2432
chr20:57230822-57231619	chr20	+	57230967	57231642	True	NR_037945,NR_037941,NR_037943,NR_037942,NM_153360,NM_001134773,NM_001134772,NM_003763,NM_001204868,NM_001001433	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,+,+,+,-,+,+,+,+,+	STX16-NPEPL1,STX16,STX16,STX16,APCDD1L,STX16,STX16,STX16,STX16,STX16	-4717,-4717,-4717,-4717,-141018,-4717,-4717,-4717,-4717,-4717
chr21:38580810-38581542	chr21	+	38580919	38581527	True	NM_006052,NR_026719	chr21,chr21	-,+	DSCR3,DSCR9	58356,-15
chr2:204193651-204194154	chr2	+	204193778	204194201	True	NM_213589,NM_005759	chr2,chr2	-,+	RAPH1,ABI2	205907,-826
chr22:20747552-20748258	chr22	+	20747561	20748247	True	NM_153334,NR_003253,NM_003426	chr22,chr22,chr22	-,+,+	SCARF2,ZNF74,ZNF74	43949,232,232
chr5:34040558-34042519	chr5	+	34040775	34042334	True	NM_030945,NM_016568,NM_181435	chr5,chr5,chr5	-,+,-	C1QTNF3,RXFP3,C1QTNF3	1102,-104335,1102
chr22:19136737-19136967	chr22	+	19136757	19136943	True	NM_005315,NM_053006,NM_022719	chr22,chr22,chr22	-,+,-	GSC2,TSSK2,DGCR14	903,-18487,-4567
chr3:196236228-196236899	chr3	+	196236371	196236772	True	NM_001105573,NM_152617,NM_001077657	chr3,chr3,chr3	+,-,-	FBXO45,RNF168,C3orf43	58952,-5732,5515
chr7:39988177-39988936	chr7	+	39988206	39988897	True	NM_031267,NM_138701,NM_003718	chr7,chr7,chr7	+,-,+	CDK13,C7orf11,CDK13	1061,185404,1061
chr11:95532800-95533626	chr11	+	95532892	95533548	True	NM_144664,NM_014679	chr11,chr11	-,+	FAM76B,CEP57	-9938,-9303
chr3:137722734-137723230	chr3	+	137723120	137723218	True	NM_016369,NM_001002026,NM_001170538	chr3,chr3,chr3	+,+,-	CLDN18,CLDN18,DZIP1L	5787,-5520,109154
chr2:46705062-46705348	chr2	+	46705249	46705373	True	NM_080653,NM_001145051	chr2,chr2	-,+	ATP6V1E2,LOC388946	41773,1330
chr5:179920939-179921210	chr5	+	179921046	179921172	True	NM_052863,NM_015455	chr5,chr5	-,+	SCGB3A1,CNOT6	97365,244
chr19:14376342-14376718	chr19	+	14376350	14376704	True	NM_014921,NM_001025160	chr19,chr19	-,+	LPHN1,CD97	-59353,115508
chr8:39573361-39574993	chr8	+	39573382	39574808	True	NM_001464,NM_014237	chr8,chr8	-,+	ADAM2,ADAM18	121034,-131352
chr6:142917019-142918639	chr6	+	142917612	142918628	True	NR_027311,NM_198569	chr6,chr6	-,+	LOC153910,GPR126	40396,-294607
chr17:76618831-76620813	chr17	+	76619389	76620800	True	NM_173628,NM_024419	chr17,chr17	-,+	DNAH17,PGS1	-45913,-244705
chr1:24967977-24968455	chr1	+	24968038	24968492	True	NM_005839,NM_001199012	chr1,chr1	+,-	SRRM1,C1orf201	1101,-226451
chr2:108443361-108443579	chr2	+	108443361	108443489	True	NM_182588,NR_024439	chr2,chr2	+,-	RGPD4,LOC729121	-24,-778
chr20:42577260-42577951	chr20	+	42577346	42577912	True	NM_001098798,NM_176791	chr20,chr20	+,-	TOX2,GTSF1L	-2861,-221704
chr8:33328467-33329061	chr8	+	33328621	33329109	True	NM_032509,NM_032664	chr8,chr8	+,-	MAK16,FUT10	13575,1605
chr11:14381413-14381629	chr11	+	14381475	14381655	True	NM_000922,NM_001102669,NM_012250,NM_001177314,NM_001177315	chr11,chr11,chr11,chr11,chr11	+,-,-,-,-	PDE3B,RRAS2,RRAS2,RRAS2,RRAS2	283613,-1402,-745,4447,-1444
chr19:50873096-50874672	chr19	+	50873473	50874636	True	NM_007121,NM_004851	chr19,chr19	+,-	NR1H2,NAPSA	5048,-4542
chr9:140471731-140472266	chr9	+	140471809	140472254	True	NM_032477,NM_138778	chr9,chr9	+,-	MRPL41,WDR85	-25551,1183
chr9:26956524-26957906	chr9	+	26956599	26957664	True	NM_001099224,NM_001031689,NM_025103,NM_001099223,NM_001099222	chr9,chr9,chr9,chr9,chr9	+,-,+,+,+	IFT74,PLAA,IFT74,IFT74,IFT74	-279,-9131,-279,-9613,-9340
chr3:3152856-3153825	chr3	+	3152856	3153609	True	NM_000564,NM_175728,NM_182916,NM_175725,NM_175724,NM_175727,NM_175726	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,+,-,-,-,-	IL5RA,IL5RA,TRNT1,IL5RA,IL5RA,IL5RA,IL5RA	-798,-798,14990,-798,-798,-798,-798
chr5:180466561-180467801	chr5	+	180466665	180467787	True	NM_152547,NM_203297	chr5,chr5	+,-	BTNL9,TRIM7	-22,160193
chr6:33757357-33758054	chr6	+	33757400	33758082	True	NM_001143944,NM_002224,NM_181336	chr6,chr6,chr6	-,+,-	LEMD2,ITPR3,LEMD2	-2681,-168295,-494
chr4:115849156-115850393	chr4	+	115849156	115850412	True	NM_022569,NR_030303	chr4,chr4	-,+	NDST4,MIR577	184670,-271298
chr15:48624673-48625021	chr15	+	48624794	48625056	True	NM_001948,NM_001025248,NM_001025249,NM_016132	chr15,chr15,chr15,chr15	+,+,+,-	DUT,DUT,DUT,MYEF2	-484,-1228,-1228,-154236
chr3:118892291-118892519	chr3	+	118892332	118892506	True	NM_006952,NM_152538	chr3,chr3	+,-	UPK1B,IGSF11	-4,-27434
chr11:74166863-74167299	chr11	+	74167016	74167099	True	NM_006591,NM_005472	chr11,chr11	+,-	POLD3,KCNE3	136529,11554
chr8:57300011-57301698	chr8	+	57300031	57301553	True	NM_006211,NM_024300	chr8,chr8	-,+	PENK,CHCHD7	57090,-175774
chr17:37310062-37310537	chr17	+	37310067	37310573	True	NM_020405,NM_000981	chr17,chr17	-,+	PLXDC1,RPL19	-2165,45962
chr10:96969298-96969744	chr10	+	96969338	96969784	True	NM_207321,NM_020992	chr10,chr10	+,-	C10orf129,PDLIM1	-15432,81048
chr1:32800609-32800903	chr1	+	32800661	32800839	True	NM_023009,NM_052841	chr1,chr1	-,+	MARCKSL1,TSSK3	1045,27022
chr12:121149013-121150228	chr12	+	121149144	121150246	True	NM_001080533,NM_198202	chr12,chr12	+,-	UNC119B,POP5	-1376,-129943
chr17:8297988-8299582	chr17	+	8298086	8299626	True	NM_001146684,NM_001025579	chr17,chr17	-,+	RNF222,NDEL1	1568,39552
chr11:66792978-66793903	chr11	+	66793005	66793636	True	NM_177963,NM_001040716,NM_001177880	chr11,chr11,chr11	+,-,+	SYT12,PC,SYT12	-2240,-67158,-2866
chrX:70442139-70442691	chrX	+	70442407	70442735	True	NM_000166,NM_001097642,NM_201599	chrX,chrX,chrX	+,+,-	GJB1,GJB1,ZMYM3	320,-7396,31353
chr8:37593868-37594110	chr8	+	37593942	37594132	True	NR_003671,NM_007175,NM_001003790,NM_001003791	chr8,chr8,chr8,chr8	-,+,+,+	LOC728024,ERLIN2,ERLIN2,ERLIN2	11482,-20,66,-20
chr9:140195135-140195576	chr9	+	140195296	140195524	True	NM_017723,NM_001004354	chr9,chr9	+,-	C9orf167,NRARP	-23067,1229
chr1:16063469-16063954	chr1	+	16063621	16063709	True	NM_001089591,NM_001013641,NM_207348	chr1,chr1,chr1	-,+,+	UQCRHL,TMEM82,SLC25A34	70535,5207,-863
chr7:106508399-106508627	chr7	+	106508462	106508676	True	NM_175884,NM_002649	chr7,chr7	-,+	FLJ36031,PIK3CG	-206828,-2589
chr6:75995429-75995897	chr6	+	75995521	75995709	True	NM_001143958,NM_018247,NM_001100409	chr6,chr6,chr6	-,-,+	TMEM30A,TMEM30A,SENP6	-889,-889,315912
chr11:111173325-111173882	chr11	+	111173386	111173916	True	NM_001136105,NR_034154	chr11,chr11	+,-	C11orf93,C11orf92	-3461,-2847
chr6:49493198-49493735	chr6	+	49493368	49493778	True	NM_000255,NM_001145652	chr6,chr6	-,+	MUT,C6orf141	-62327,24334
chr4:100519979-100521090	chr4	+	100520191	100521129	True	NM_001134666,NM_000253	chr4,chr4	-,+	RG9MTD2,MTTP	-35002,-35002
chr9:41999298-42000004	chr9	+	41999318	42000040	True	NR_003670,NM_001012421	chr9,chr9	-,+	KGFLP2,ANKRD20A2	19594,368262
chr9:41999298-42000004	chr9	+	44382540	44382750	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	607485,-751810
chr9:41999298-42000004	chr9	+	46824077	46824657	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-3193347,-136563
chr9:41999298-42000004	chr9	-	46707139	46707719	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-3076409,-19624
chr17:41130939-41131353	chr17	+	41131071	41131371	True	NM_001142653,NM_001136042,NM_025267,NM_173079,NM_001142654	chr17,chr17,chr17,chr17,chr17	-,-,-,+,-	AARSD1,AARSD1,AARSD1,RUNDC1,AARSD1	1224,1224,699,1210,1224
chr1:205649892-205651450	chr1	+	205650012	205651005	True	NM_033102,NM_181644	chr1,chr1	-,+	SLC45A3,MFSD4	-382,-111952
chr7:66091077-66092965	chr7	+	66091271	66092550	True	NM_153033,NM_001167961,NR_002933	chr7,chr7,chr7	+,+,-	KCTD7,KCTD7,LOC493754	1317,1317,-47773
chr17:900083-900404	chr17	+	900108	900340	True	NM_013337,NM_022463	chr17,chr17	+,-	TIMM22,NXN	16,-17098
chr9:126692578-126693650	chr9	+	126692799	126693665	True	NM_004789,NM_020946,NM_024820	chr9,chr9,chr9	+,-,-	LHX2,DENND1A,DENND1A	80223,-382,-382
chr1:160232304-160232837	chr1	+	160232343	160232809	True	NR_028105,NR_028104,NR_028106,NR_028103,NR_002190,NM_015726	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,+,-	DCAF8,DCAF8,DCAF8,DCAF8,SUMO1P3,DCAF8	-25,-25,-66,-25,54245,7
chr22:31502700-31502902	chr22	+	31502699	31502881	True	NM_080430,NM_001002837	chr22,chr22	-,+	SELM,INPP5J	720,16079
chr3:161039500-161040725	chr3	+	161039567	161040680	True	NM_015938,NM_001040100	chr3,chr3	+,-	NMD3,C3orf57	-100525,49250
chr6:7310864-7312818	chr6	+	7311180	7312737	True	NM_031480,NM_003144	chr6,chr6	+,-	RIOK1,SSR1	77324,854
chr10:124211179-124212994	chr10	+	124211295	124212666	True	NM_001099667,NM_001010912,NM_002775	chr10,chr10,chr10	+,-,+	ARMS2,C10orf120,HTRA1	1512,246739,8374
chr6:33547384-33547592	chr6	+	33547466	33547608	True	NR_028361,NM_001188	chr6,chr6	+,-	GGNBP1,BAK1	3867,512
chr16:789602-790132	chr16	+	789628	790108	True	NM_032304,NM_022493	chr16,chr16	+,-	HAGHL,NARFL	-12413,939
chr4:141682085-141682787	chr4	+	141682099	141682821	True	NM_015130,NM_153702	chr4,chr4	-,+	TBC1D9,ELMOD2	-4628,-236839
chr3:108046902-108048484	chr3	+	108047166	108048480	True	NM_007072,NM_018010	chr3,chr3	+,-	HHLA2,IFT57	-25886,-105749
chr5:140801069-140801566	chr5	+	140801109	140801605	True	NM_032091,NM_032090,NM_018927,NM_032092,NM_032094,NM_032101,NM_005642,NM_018914,NM_018913,NM_003735,NR_001297	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,-,+,+,+,+	PCDHGA11,PCDHGA10,PCDHGB7,PCDHGA11,PCDHGA12,PCDHGB7,TAF7,PCDHGA11,PCDHGA10,PCDHGA12,PCDHGB8P	-623,-8417,-3900,-623,8552,-3946,-100758,-623,-8417,8552,4247
chr3:131742624-131743085	chr3	+	131742630	131742856	True	NM_001099,NM_130808	chr3,chr3	+,-	ACPP,CPNE4	293354,11046
chr20:43594238-43594929	chr20	+	43594303	43594965	True	NM_006809,NM_006282	chr20,chr20	-,+	TOMM34,STK4	-5189,154
chr7:55984829-55986609	chr7	+	55985068	55986396	True	NM_182633,NM_207366	chr7,chr7	+,-	ZNF713,SEPT14	-4789,-54586
chr11:134197951-134199664	chr11	+	134198285	134199425	True	NM_138342,NM_199298	chr11,chr11	+,-	GLB1L2,THYN1	2342,-75025
chr9:100177056-100177997	chr9	+	100177199	100177919	True	NR_026847,NM_014290	chr9,chr9	-,+	LOC286359,TDRD7	-18226,-2948
chr1:149789196-149789520	chr1	+	149789292	149789448	True	NM_001024599,NM_001161334,NM_001123375,NM_001034077	chr1,chr1,chr1,chr1	-,-,-,+	HIST2H2BF,HIST2H2BF,HIST2H3D,HIST2H4B	-5364,-5364,-4056,14772
chr1:149789196-149789520	chr1	-	120900466	120900542	False	NR_027337,NM_001004340	chr1,chr1	+,-	HIST2H2BA,FCGR1B	5491,35453
chr1:149789196-149789520	chr1	+	149404669	149404745	False	NR_027484,NM_001024599	chr1,chr1	+,-	FCGR1C,HIST2H2BF	-35427,-5440
chr1:149789196-149789520	chr1	-	149847520	149847676	False	NM_003517,NM_003528	chr1,chr1	+,-	HIST2H2AC,HIST2H2BE	10848,10613
chr1:180458882-180459775	chr1	+	180459189	180459410	True	NM_001135669,NM_032360	chr1,chr1	+,-	XPR1,ACBD6	141735,12663
chr1:110916850-110918792	chr1	+	110917021	110918838	True	NM_001201546,NM_022768	chr1,chr1	-,+	SLC16A4,RBM15	14916,-35134
chr3:122051544-122053246	chr3	+	122051552	122053227	True	NM_005213,NM_001017928	chr3,chr3	+,-	CSTA,CCDC58	-7592,48904
chr19:46917106-46917436	chr19	+	46917164	46917224	True	NM_006247,NM_032040	chr19,chr19	+,-	PPP5C,CCDC8	-66964,-245
chr2:111117107-111118468	chr2	+	111117139	111118487	True	NR_037626,NR_027244	chr2,chr2	+,-	LOC100507334,LOC151009	-113975,23676
chr2:111117107-111118468	chr2	-	110768057	110769406	False	NR_037627,NR_036225	chr2,chr2	+,-	LOC100288570,MIR4267	-62841,58263
chr20:42087312-42087908	chr20	+	42087436	42087956	True	NR_034009,NM_001008901,NM_006275	chr20,chr20,chr20	+,-,+	SRSF6,GTSF1L,SRSF6	-990,267736,-990
chr22:16204312-16205452	chr22	+	16204432	16205425	True	NR_001591,NM_001136213	chr22,chr22	+,-	psiTPTE22,POTEH	877375,82562
chr22:16204312-16205452	chr14	-	19637730	19638116	False	NM_001145442,NR_027480	chr14,chr14	-,+	POTEM,POTEG	382207,-84416
chr22:16204312-16205452	chr14	+	19937271	19937658	False	NM_001145442,NM_172194	chr14,chr14	-,+	POTEM,OR4Q3	82664,277928
chr19:15234366-15235510	chr19	+	15234485	15235376	True	NM_006844,NM_033025	chr19,chr19	-,+	ILVBL,SYDE1	1251,-16324
chr1:43206735-43208149	chr1	+	43207075	43208191	True	NM_024097,NM_001123395,NM_148960,NM_001185117	chr1,chr1,chr1,chr1	+,-,-,-	C1orf50,CLDN19,CLDN19,CLDN19	24724,-1150,-1150,-1150
chr1:48911186-48913045	chr1	+	48911367	48912888	True	NM_001135181,NM_019073	chr1,chr1	+,-	SLC5A9,SPATA6	-223062,25041
chr18:29308082-29308610	chr18	+	29308092	29308477	True	NM_001034172,NM_000371	chr18,chr18	-,+	MCART2,TTR	32417,-136414
chr10:103986204-103986443	chr10	+	103986282	103986420	True	NM_005029,NM_152310	chr10,chr10	-,+	PITX3,ELOVL3	14861,-190
chr14:64931231-64931878	chr14	+	64931247	64931913	True	NM_006977,NM_004857	chr14,chr14	-,+	ZBTB25,AKAP5	38691,303
chr10:74715398-74716356	chr10	+	74715725	74716186	True	NM_152635,NM_032562	chr10,chr10	+,-	OIT3,PLA2G12B	-62444,-1215
chr17:38938750-38940701	chr17	+	38938765	38940158	True	NM_181537,NM_001195387	chr17,chr17	-,+	KRT27,TMEM99	21,35185
chr16:58420393-58421634	chr16	+	58420591	58421549	True	NM_001126130,NM_001126129,NM_022770,NM_001080492	chr16,chr16,chr16,chr16	+,+,+,-	GINS3,GINS3,GINS3,PRSS54	4748,4748,4748,-91640
chr5:77056852-77058787	chr5	+	77057646	77058792	True	NM_003719,NM_004607	chr5,chr5	+,-	PDE8B,TBCA	-550991,13443
chr11:43902060-43902274	chr11	+	43902077	43902319	True	NM_021926,NM_139178	chr11,chr11	-,+	ALX4,ALKBH3	429447,37
chr10:99247234-99247768	chr10	+	99247365	99247573	True	NM_022362,NM_024954	chr10,chr10	-,+	MMS19,UBTD1	10849,11194
chr12:69200402-69201167	chr12	+	69200568	69201030	True	NM_001005502,NM_002392	chr12,chr12	-,+	CPM,MDM2	126010,940
chr19:39756529-39756823	chr19	+	39756571	39756685	True	NM_172139,NM_172138	chr19,chr19	-,+	IL28B,IL28A	-20960,2471
chr19:39756529-39756823	chr19	-	39737544	39737642	False	NM_172139,NM_172138	chr19,chr19	-,+	IL28B,IL28A	-1933,21514
chrX:137792694-137793021	chrX	+	137792777	137793069	True	NM_004114,NR_028597	chrX,chrX	-,+	FGF13,SRD5A1P1	808,735908
chr11:10673280-10673575	chr11	+	10673323	10673501	True	NM_014633,NM_001098579	chr11,chr11	+,-	CTR9,MRVI1	99309,397
chr19:45581641-45582378	chr19	+	45581742	45582158	True	NM_145288,NM_001007269,NM_001007270,NM_024707	chr19,chr19,chr19,chr19	-,+,+,+	ZNF296,GEMIN7,GEMIN7,GEMIN7	-2054,371,359,371
chr18:77157421-77157758	chr18	+	77157518	77157783	True	NM_006162,NM_172388,NM_172389,NM_172387,NM_001146343,NM_172390	chr18,chr18,chr18,chr18,chr18,chr18	+,+,+,+,-,+	NFATC1,NFATC1,NFATC1,NFATC1,PQLC1,NFATC1	-1797,-1797,2542,2542,553920,-1797
chr2:163040755-163041049	chr2	+	163040764	163041050	True	NM_012198,NM_002054	chr2,chr2	+,-	GCA,GCG	159532,-31850
chr12:112203995-112204396	chr12	+	112204101	112204419	True	NR_015404,NM_001204889,NM_000690	chr12,chr12,chr12	-,+,+	C12orf47,ALDH2,ALDH2	76337,271,271
chr2:18766832-18767579	chr2	+	18766837	18767627	True	NM_033253,NM_002252,NM_001199088,NM_001002006,NM_001199086,NM_001199087,NM_001199104,NM_001199103	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	-,+,-,-,-,-,-,-	NT5C1B,KCNS3,NT5C1B,NT5C1B,NT5C1B,NT5C1B,NT5C1B-RDH14,NT5C1B-RDH14	3269,-706951,3269,3269,3269,3269,3269,3269
chr17:7624881-7625407	chr17	+	7624960	7625292	True	NM_001126114,NM_020877	chr17,chr17	-,+	TP53,DNAH2	-34097,-1974
chr6:10833025-10833412	chr6	+	10833178	10833461	True	NM_001040274,NM_005906	chr6,chr6	+,-	SYCP2L,MAK	53602,-2068
chr7:158379086-158379292	chr7	+	158379221	158379297	True	NM_130843,NM_130842,NM_018051,NM_002847	chr7,chr7,chr7,chr7	-,-,+,-	PTPRN2,PTPRN2,WDR60,PTPRN2	1239,1239,269971,1239
chr1:207831398-207832576	chr1	+	207831420	207832478	True	NM_175710,NR_029832	chr1,chr1	+,-	CR1L,MIR29C	-13027,142856
chr1:173965314-173965814	chr1	+	173965350	173965842	True	NM_172071,NM_001122770	chr1,chr1	-,+	RC3H1,ZBTB37	-3140,-127921
chr2:61391210-61392307	chr2	+	61391236	61392108	True	NM_001143959,NR_036496	chr2,chr2	+,-	C2orf74,LOC339803	-1658,-19126
chr18:30352554-30353697	chr18	+	30352619	30353697	True	NR_003558,NM_020805	chr18,chr18	+,-	WBP11P1,KLHL14	-261044,70
chr10:64134745-64136195	chr10	+	64134906	64136137	True	NM_145307,NM_199451,NM_014951,NM_199450	chr10,chr10,chr10,chr10	-,+,+,+	RTKN2,ZNF365,ZNF365,ZNF365	-106440,-1041,-1041,-1041
chr19:1382935-1383286	chr19	+	1382938	1383334	True	NM_000156,NM_024407	chr19,chr19	-,+	GAMT,NDUFS7	18268,548
chr7:140617154-140618463	chr7	+	140617188	140618466	True	NM_001195278,NM_004333	chr7,chr7	+,-	LOC100131199,BRAF	155565,6148
chr6:80774481-80774814	chr6	+	80774492	80774818	True	NM_022726,NM_000056	chr6,chr6	-,+	ELOVL4,BCKDHB	-117177,41525
chr6:80774481-80774814	chr10	+	24873831	24874157	False	NM_020824,NR_030334	chr10,chr10	-,+	ARHGAP21,MIR603	138490,-309269
chr15:45543460-45544959	chr15	+	45543600	45544977	True	NM_138356,NM_004212	chr15,chr15	-,+	SHF,SLC28A2	-50227,95
chr6:26204976-26205584	chr6	+	26205055	26205582	True	NM_021065,NM_003545,NM_003530,NM_003522	chr6,chr6,chr6,chr6	-,+,-,+	HIST1H2AD,HIST1H4E,HIST1H3D,HIST1H2BF	-5584,-233,-5591,-5319
chr6:34854373-34854800	chr6	+	34854593	34854801	True	NM_005643,NM_015245	chr6,chr6	-,+	TAF11,ANKS1A	1068,2236
chr11:73692520-73693002	chr11	+	73692525	73693041	True	NM_153614,NM_003355	chr11,chr11	+,-	DNAJB13,UCP2	-31212,898
chr14:99180552-99181597	chr14	+	99180959	99181597	True	NM_022898,NM_182560	chr14,chr14	-,+	BCL11B,C14orf177	556275,-3073
chr7:65971962-65972862	chr7	+	65972355	65972903	True	NM_001167961,NR_002933	chr7,chr7	+,-	KCTD7,LOC493754	120964,70645
chr2:27615292-27616235	chr2	+	27615582	27616138	True	NM_014748,NR_002201	chr2,chr2	+,-	SNX17,FTH1P3	-22244,355
chr9:34130683-34131996	chr9	+	34131470	34132004	True	NM_015397,NM_001171201	chr9,chr9	-,+	DCAF12,UBAP1	-4699,46998
chrX:153848461-153849145	chrX	+	153848603	153849181	True	NM_139250,NM_001327	chrX,chrX	-,-	CTAG1A,CTAG1B	-1081,-1081
chrX:153848461-153849145	chrX	-	153811758	153812336	False	NM_139250,NM_001327	chrX,chrX	+,+	CTAG1A,CTAG1B	1081,1081
chr15:80352673-80353137	chr15	+	80352822	80352992	True	NM_004049,NM_019006	chr15,chr15	-,+	BCL2A1,ZFAND6	-89179,-858
chr3:42950420-42951131	chr3	+	42950419	42950548	True	NM_207404,NM_004391,NM_001134656	chr3,chr3,chr3	+,-,+	ZNF662,CYP8B1,ZNF662	-3077,-32786,-2821
chr7:105746762-105747906	chr7	+	105747317	105747917	True	NM_152750,NM_006754,NM_182715	chr7,chr7,chr7	+,-,-	CDHR3,SYPL1,SYPL1	-143719,5198,4899
chrX:51546178-51546391	chrX	+	51546178	51546386	True	NM_001005332,NR_033773	chrX,chrX	+,-	MAGED1,LOC441495	-74,-120731
chr4:37892041-37892290	chr4	+	37892054	37892274	True	NM_001085400,NM_015173	chr4,chr4	-,+	RELL1,TBC1D1	-204055,445
chr19:5823350-5823732	chr19	+	5823475	5823761	True	NM_004558,NM_000150	chr19,chr19	+,-	NRTN,FUT6	56,16031
chr7:95946441-95947244	chr7	+	95946570	95947014	True	NR_027662,NM_004411,NM_014251,NM_001160210	chr7,chr7,chr7,chr7	-,+,-,-	SLC25A13,DYNC1I1,SLC25A13,SLC25A13	4495,-544803,4495,4495
chr14:92040867-92041616	chr14	+	92041047	92041439	True	NR_003709,NM_001080113	chr14,chr14	+,-	SNORA11B,C14orf184	-448328,2
chr19:44952670-44954545	chr19	+	44952846	44954331	True	NM_001205280,NM_014518	chr19,chr19	+,-	LOC147710,ZNF229	162608,-181
chr11:61889157-61889699	chr11	+	61889227	61889672	True	NM_001040694,NM_002032,NM_020238	chr11,chr11,chr11	+,-,+	INCENP,FTH1,INCENP	1772,-154095,1772
chr2:240322518-240322743	chr2	+	240322554	240322742	True	NR_036229,NM_006037	chr2,chr2	+,-	MIR4269,HDAC4	-95448,1
chr19:50667090-50668703	chr19	+	50667701	50668380	True	NM_001145809,NM_152358	chr19,chr19	+,-	MYH14,IZUMO2	38504,-1163
chr2:30367835-30368458	chr2	+	30368019	30368245	True	NM_004304,NM_001127399,NM_016061,NM_001127401,NM_001127400	chr2,chr2,chr2,chr2,chr2	-,+,+,+,+	ALK,YPEL5,YPEL5,YPEL5,YPEL5	-223542,1504,1504,1504,1504
chr15:41047930-41048194	chr15	+	41047929	41048204	True	NM_018145,NM_005258	chr15,chr15	-,+	FAM82A2,GCHFR	-471,8080
chr13:24734316-24734543	chr13	+	24734320	24734390	True	NM_153023,NR_031753,NM_001166271,NM_001007537	chr13,chr13,chr13,chr13	+,+,+,-	SPATA13,MIR2276,SPATA13,C1QTNF9B	470,2164,470,-263195
chr12:51157591-51158062	chr12	+	51157618	51157948	True	NM_005171,NM_001174130	chr12,chr12	+,-	ATF1,SLC11A2	40,245155
chr20:35582544-35583121	chr20	+	35582730	35582942	True	NM_015474,NM_080628	chr20,chr20	-,+	SAMHD1,C20orf118	-2484,-78217
chr21:46238301-46238507	chr21	+	46238356	46238536	True	NM_058190,NM_198699,NM_006936	chr21,chr21,chr21	+,+,-	C21orf70,KRTAP10-12,SUMO3	121418,-121320,-312
chr19:7295912-7297195	chr19	+	7296231	7297038	True	NM_000208,NM_001079817,NM_015318	chr19,chr19,chr19	-,-,+	INSR,INSR,ARHGEF18	-2220,-2220,162960
chr1:17909053-17909292	chr1	+	17909093	17909263	True	NM_018715,NM_001011722	chr1,chr1	-,+	RCC2,ARHGEF10L	-142873,-2096
chr5:7873599-7875446	chr5	+	7873606	7875466	True	NM_002454,NR_036553,NM_024010,NM_024091	chr5,chr5,chr5,chr5	+,-,+,-	MTRR,FASTKD3,MTRR,FASTKD3	-4440,-4456,-4440,-4456
chr15:44941442-44942485	chr15	+	44941751	44942448	True	NM_004048,NM_001160227	chr15,chr15	+,-	B2M,SPG11	61236,13487
chr6:5247272-5247539	chr6	+	5247280	5247578	True	NM_006567,NM_001164841	chr6,chr6	+,-	FARS2,LYRM4	14005,13644
chr3:123680327-123681098	chr3	+	123680429	123680665	True	NR_028136,NM_022757	chr3,chr3	+,-	KALRN,CCDC14	132892,-174
chr11:5706399-5706822	chr11	+	5706413	5706820	True	NM_033092,NM_033093,NM_033034,NM_006074,NM_001199573	chr11,chr11,chr11,chr11,chr11	-,-,-,+,+	TRIM5,TRIM5,TRIM5,TRIM22,TRIM22	-74,-74,-74,3996,3996
chr21:19256717-19257743	chr21	+	19256849	19257783	True	NM_001204175,NR_024354	chr21,chr21	+,-	CHODL,NCRNA00157	31873,192
chr1:45986429-45986874	chr1	+	45986577	45986655	True	NM_181696,NM_002574,NM_001202431,NM_015506,NM_181697	chr1,chr1,chr1,chr1,chr1	-,-,-,+,-	PRDX1,PRDX1,PRDX1,MMACHC,PRDX1	1007,1007,1959,-20772,1007
chr4:119609514-119611354	chr4	+	119609624	119611136	True	NM_014822,NM_020961	chr4,chr4	-,+	SEC24D,METTL14	146247,-3106
chr9:100685547-100687337	chr9	+	100685660	100687344	True	NM_016481,NM_006401	chr9,chr9	-,+	C9orf156,ANP32B	-808,58144
chr10:54075613-54076335	chr10	+	54075641	54076350	True	NM_012242,NM_000242	chr10,chr10	+,-	DKK1,MBL2	-1651,455160
chr7:102713443-102715064	chr7	+	102713584	102715000	True	NM_031905,NM_001161012,NM_001161013,NM_001161010,NM_001161011,NM_001161009,NM_001111038,NM_145032	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,+,+,-,-	ARMC10,ARMC10,ARMC10,ARMC10,ARMC10,ARMC10,FBXL13,FBXL13	327,327,327,327,327,327,338,65
chr15:102257218-102258493	chr15	+	102257426	102258267	True	NM_152334,NM_001005326	chr15,chr15	-,+	TARSL2,OR4F6	6429,87655
chr6:28324653-28325871	chr6	+	28324830	28325854	True	NM_024493,NM_145909,NM_001135215	chr6,chr6,chr6	+,-,-	ZKSCAN3,ZNF323,ZNF323	-7192,-2858,-782
chr19:12147012-12147357	chr19	+	12147316	12147384	True	NM_001136501,NM_001080411	chr19,chr19	+,-	ZNF844,ZNF433	28161,-791
chr2:183903759-183905351	chr2	+	183903906	183904920	True	NM_013436,NM_001142314,NM_205842	chr2,chr2,chr2	-,+,-	NCKAP1,DUSP19,NCKAP1	-677,38366,-677
chr3:170619503-170620351	chr3	+	170619649	170620184	True	NM_020390,NM_001185056	chr3,chr3	-,+	EIF5A2,CLDN11	6299,-480672
chr19:12918154-12918526	chr19	+	12918172	12918338	True	NM_005809,NM_181738,NM_006397	chr19,chr19,chr19	-,-,+	PRDX2,PRDX2,RNASEH2A	-5478,-5478,-795
chrX:142722492-142722772	chrX	+	142722722	142722792	True	NM_001012989,NM_001184750,NM_001184749,NM_173078	chrX,chrX,chrX,chrX	+,-,-,-	UBE2NL,SLITRK4,SLITRK4,SLITRK4	244380,-403,1184,277
chr12:72666363-72666807	chr12	+	72666638	72666742	True	NR_026837,NR_026836,NM_013381	chr12,chr12,chr12	-,-,+	LOC283392,LOC283392,TRHDE	597,597,-160
chr4:80935144-80935442	chr4	+	80935195	80935415	True	NM_020226,NM_058172	chr4,chr4	+,-	PRDM8,ANTXR2	171008,59116
chr5:132208556-132209233	chr5	+	132208585	132209253	True	NM_014402,NM_052971,NM_005260	chr5,chr5,chr5	+,+,-	UQCRQ,LEAP2,GDF9	-6320,104,-8108
chr1:53608960-53610936	chr1	+	53609171	53610855	True	NM_000098,NM_006671	chr1,chr1	+,-	CPT2,SLC1A7	51245,-882
chr3:107845743-107846283	chr3	+	107846046	107846283	True	NM_007072,NM_198793	chr3,chr3	+,-	HHLA2,CD47	175048,-36111
chr3:181346669-181347773	chr3	+	181346679	181347659	True	NR_033725,NR_004053	chr3,chr3	-,+	DNAJC19,SOX2OT	-639117,-18579
chr2:85354394-85356363	chr2	+	85354653	85356201	True	NM_006464,NM_031283	chr2,chr2	-,+	TGOLN2,TCF7L1	199231,4381
chr14:53418172-53418376	chr14	+	53418258	53418425	True	NM_001134999,NM_006832,NM_001135000,NM_145251	chr14,chr14,chr14,chr14	-,-,-,+	FERMT2,FERMT2,FERMT2,STYX	-443,-443,-443,-221426
chr16:85144993-85145306	chr16	+	85144992	85145066	True	NR_033984,NM_198491	chr16,chr16	+,-	LOC400548,FAM92B	25689,1098
chr2:86784530-86786437	chr2	+	86784594	86786385	True	NM_016079,NM_001146688,NR_036454,NM_001193517,NM_001005753	chr2,chr2,chr2,chr2,chr2	-,+,-,-,-	VPS24,KDM3A,VPS24,VPS24,VPS24	4285,-116063,4285,4285,4285
chr7:74681290-74681870	chr7	+	74681677	74681762	True	NM_001003795,NR_003580	chr7,chr7	+,-	GTF2IRD2B,LOC100093631	-173389,-28218
chr7:74681290-74681870	chr7	-	72540865	72540950	False	NR_003664,NR_003580	chr7,chr7	-,+	SPDYE8P,LOC100093631	-40556,28061
chr7:74681290-74681870	chr7	+	74895931	74896016	False	NM_001145064,NR_003664	chr7,chr7	-,+	GATSL2,SPDYE8P	-28590,40516
chr22:37175357-37176771	chr22	+	37175434	37176704	True	NM_001177701,NR_033531,NM_006860,NM_000631	chr22,chr22,chr22,chr22	-,-,-,+	IFT27,IFT27,IFT27,NCF4	-3262,-3262,-3262,80325
chr4:141272831-141274723	chr4	+	141272877	141274413	True	NM_001153446,NM_001153585,NM_001153690,NM_001153635,NR_033939	chr4,chr4,chr4,chr4,chr4	+,+,+,+,-	SCOC,SCOC,SCOC,SCOC,LOC100129858	-8332,-8314,-8314,-8332,20183
chr11:73359475-73360579	chr11	+	73359550	73360480	True	NM_001130036,NM_001130034,NM_001130035,NM_001130033,NM_021200,NM_015159	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,-	PLEKHB1,PLEKHB1,PLEKHB1,PLEKHB1,PLEKHB1,FAM168A	38,-1008,-1008,-2379,-2379,-50322
chr9:33077723-33078573	chr9	+	33077892	33078261	True	NM_001539,NM_018225	chr9,chr9	+,-	DNAJA1,SMU1	-52745,-1178
chr1:110650334-110650618	chr1	+	110650346	110650486	True	NM_006492,NM_203412	chr1,chr1	-,+	ALX3,UBL4B	-37024,4575
chr16:57504801-57506036	chr16	+	57504980	57505950	True	NM_018110,NM_032940	chr16,chr16	-,+	DOK4,POLR2C	14485,-8487
chr11:114317941-114318417	chr11	+	114318029	114318383	True	NM_015523,NM_019021	chr11,chr11	+,-	REXO2,C11orf71	-7972,-46890
chr2:74740578-74740866	chr2	+	74740586	74740806	True	NM_016170,NM_032673	chr2,chr2	+,-	TLX2,PCGF1	789,-5765
chr15:76135990-76136196	chr15	+	76136035	76136099	True	NM_001145335,NM_173469,NR_036198	chr15,chr15,chr15	+,+,-	UBE2Q2,UBE2Q2,MIR4313	285,-464,-81379
chr1:1359956-1360328	chr1	+	1360121	1360193	True	NR_026871,NM_001146685,NM_001145210	chr1,chr1,chr1	-,+,-	LOC441869,TMEM88B,LOC441869	-3471,1314,-3471
chr5:126339364-126340919	chr5	+	126339471	126340796	True	NM_001198557,NM_178450	chr5,chr5	+,-	LMNB1,MARCH3	-226684,25694
chr2:74648202-74648727	chr2	+	74648329	74648765	True	NM_001145054,NM_032118	chr2,chr2	-,+	C2orf81,WDR54	-3485,119
chr6:149066794-149067608	chr6	+	149066904	149067624	True	NM_207360,NM_005715	chr6,chr6	-,+	ZC3H12D,UST	738574,646
chr17:62779856-62780213	chr17	+	62779982	62780178	True	NR_026899,NM_138363,NR_027487	chr17,chr17,chr17	-,+,-	LOC146880,CCDC45,LOC146880	-1865,-276875,-2360
chr12:65155676-65156894	chr12	+	65155681	65156751	True	NM_002076,NM_015279	chr12,chr12	-,+	GNS,TBC1D30	-2455,61600
chr20:61432878-61433167	chr20	+	61432991	61433135	True	NM_007346,NM_018270,NM_006602	chr20,chr20,chr20	+,+,-	OGFR,C20orf20,TCFL5	3041,-5237,60030
chrX:107079574-107080301	chrX	+	107079841	107080236	True	NM_052817,NM_198057	chrX,chrX	+,-	MID2,TSC22D3	-10812,-60824
chr16:30031388-30032795	chr16	+	30031686	30032646	True	NM_031478,NM_001109660,NM_003586,NM_001109659	chr16,chr16,chr16,chr16	-,+,-,+	FAM57B,C16orf92,DOC2A,C16orf92	9590,2008,-9285,2008
chr15:41577172-41578589	chr15	+	41577172	41578408	True	NM_007280,NR_026757	chr15,chr15	-,+	OIP5,LOC729082	46469,-1025
chr22:25594916-25595928	chr22	+	25595225	25595895	True	NM_004076,NM_182492	chr22,chr22	+,-	CRYBB3,LRP5L	-71,162679
chr4:672707-673179	chr4	+	672743	672999	True	NM_007100,NM_002477,NR_033743	chr4,chr4,chr4	-,+,-	ATP5I,MYL5,ATP5I	-4616,-1083,-4616
chr9:130615419-130615679	chr9	+	130615418	130615716	True	NM_000118,NM_001114753,NM_001018078	chr9,chr9,chr9	-,-,+	ENG,ENG,FPGS	1381,1381,-49961
chr12:46121044-46121282	chr12	+	46121074	46121184	True	NR_028408,NM_152641	chr12,chr12	-,+	LOC400027,ARID2	570,2435
chr1:55462987-55463196	chr1	+	55463019	55463219	True	NM_057176,NM_014762	chr1,chr1	+,-	BSND,DHCR24	1397,-110098
chr6:135785840-135786187	chr6	+	135785884	135786212	True	NM_001134830,NR_026805	chr6,chr6	-,+	AHI1,NCRNA00271	32743,32726
chr15:48934497-48936076	chr15	+	48935100	48936115	True	NM_014335,NM_000138	chr15,chr15	+,-	EID1,FBN1	234174,1921
chr9:25678681-25678884	chr9	+	25678680	25678931	True	NM_001004125,NM_001099223	chr9,chr9	-,+	TUSC1,IFT74	-25,1268105
chr10:116580892-116581330	chr10	+	116580891	116581261	True	NM_001135051,NM_020940,NM_001003408	chr10,chr10,chr10	+,+,-	FAM160B1,FAM160B1,ABLIM1	241,241,-136477
chr18:47808948-47809163	chr18	+	47809023	47809135	True	NM_001101654,NM_001204143,NM_001204139,NM_015844,NM_015847,NM_015846,NM_001204140,NM_001204141,NM_001204142,NM_001204136,NM_001204151,NM_001039535,NM_015845,NM_002384,NM_014593,NM_001204137,NM_001204138	chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18	-,-,-,-,-,-,-,-,-,-,-,+,-,-,-,-,-	CXXC1,MBD1,MBD1,MBD1,MBD1,MBD1,MBD1,MBD1,MBD1,MBD1,MBD1,SKA1,MBD1,MBD1,CXXC1,MBD1,MBD1	5607,-886,-879,-879,-879,-879,-879,-879,-879,-879,-2636,92256,-879,-879,5607,-879,-879
chr3:49396324-49397808	chr3	+	49396370	49397789	True	NM_201397,NM_022171,NM_000581	chr3,chr3,chr3	-,+,-	GPX1,TCTA,GPX1	-579,51849,-579
chr1:12975047-12975800	chr1	+	12975109	12975614	True	NM_001012277,NM_001012276,NM_001039361	chr1,chr1,chr1	+,+,-	PRAMEF7,PRAMEF8,PRAMEF10	1898,835,-17015
chr1:12975047-12975800	chr1	-	13391600	13392094	False	NM_001012276,NM_001098376	chr1,chr1	-,+	PRAMEF8,PRAMEF15	-835,29081
chr1:12975047-12975800	chr1	-	13612385	13612891	False	NM_001012277,NM_001012276,NM_001098376	chr1,chr1,chr1	-,-,+	PRAMEF7,PRAMEF8,PRAMEF15	-1898,-835,29081
chr4:39146323-39147280	chr4	+	39146357	39147071	True	NM_025132,NM_024943	chr4,chr4	+,-	WDR19,TMEM156	36952,-112316
chr21:46104170-46104906	chr21	+	46104459	46104897	True	NM_181686,NM_198699	chr21,chr21	-,+	KRTAP12-1,KRTAP10-12	-2381,12189
chr16:3031789-3032767	chr16	+	3031833	3032457	True	NR_033861,NM_004203,NM_182687	chr16,chr16,chr16	+,-,-	LOC283875,PKMYT1,PKMYT1	6597,-1293,-1293
chr15:38545292-38545503	chr15	+	38545382	38545542	True	NM_152594,NM_001128602	chr15,chr15	+,-	SPRED1,RASGRP1	-381,311515
chr1:161335843-161336468	chr1	+	161335887	161336461	True	NM_001013625,NM_003001	chr1,chr1	-,+	C1orf192,SDHC	1253,-51773
chr7:98742396-98744056	chr7	+	98742741	98743926	True	NM_020429,NM_001199847,NR_002147,NM_181349	chr7,chr7,chr7,chr7	-,-,+,-	SMURF1,SMURF1,MYH16,SMURF1	-998,-998,126997,-998
chr22:42915050-42915516	chr22	+	42915171	42915463	True	NR_027786,NM_015703	chr22,chr22	+,-	SERHL,RRP7A	-18638,416
chr22:42915050-42915516	chr22	+	42977387	42977587	False	NR_002184,NM_014509	chr22,chr22	-,+	RRP7B,SERHL2	480,-27514
chr17:34310970-34311379	chr17	+	34311048	34311424	True	NM_004590,NM_032963,NM_032962,NM_002988	chr17,chr17,chr17,chr17	-,-,-,+	CCL16,CCL14,CCL14,CCL18	-2525,2390,2390,80218
chr1:209819546-209820525	chr1	+	209819680	209820540	True	NM_001127641,NM_001017402,NM_015714,NM_000228	chr1,chr1,chr1,chr1	-,-,+,-	LAMB3,LAMB3,G0S2,LAMB3	5184,4189,28129,5330
chr10:96801460-96802701	chr10	+	96801626	96802607	True	NM_000771,NM_000770	chr10,chr10	+,-	CYP2C9,CYP2C8	-103262,26701
chr14:92507942-92508978	chr14	+	92508089	92508777	True	NM_004239,NM_017437	chr14,chr14	-,+	TRIP11,CPSF2	-1686,79520
chr15:34726648-34727308	chr15	+	34726690	34727304	True	NM_175741,NR_027409	chr15,chr15	+,-	C15orf55,GOLGA8A	-88675,2413
chr7:2272179-2272418	chr7	+	2272189	2272451	True	NM_003550,NM_002452,NM_198952,NM_198950,NM_013393,NM_001013836,NM_001013837,NM_198948,NM_198949	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,-,-,-,+,+	MAD1L1,NUDT1,NUDT1,NUDT1,FTSJ2,MAD1L1,MAD1L1,NUDT1,NUDT1	182,9405,9444,9444,9432,182,182,9405,9405
chrX:17660918-17662094	chrX	+	17661087	17662128	True	NM_001136024,NR_033348	chrX,chrX	+,-	NHS,RAI2	-7725,216878
chrX:37430586-37430906	chrX	+	37430623	37430733	True	NM_001170331,NM_006520,NM_198511	chrX,chrX,chrX	+,-,+	LANCL3,DYNLT3,LANCL3	88,276206,88
chr8:134203302-134203761	chr8	+	134203326	134203618	True	NR_037944,NM_003882,NM_001045557,NM_001204870,NM_080838,NM_001204869	chr8,chr8,chr8,chr8,chr8,chr8	+,+,-,+,+,+	WISP1,WISP1,SLA,WISP1,WISP1,WISP1	-95,-95,-88016,-95,-95,-95
chr16:67598662-67598995	chr16	+	67598662	67598909	True	NM_001191022,NM_001138,NM_006565	chr16,chr16,chr16	+,-,+	CTCF,AGRP,CTCF	-2403,-80946,-2403
chr19:40338843-40339110	chr19	+	40338991	40339079	True	NM_001143832,NM_001436	chr19,chr19	+,-	LEUTX,FBL	-71808,-1937
chrX:71401502-71401750	chrX	+	71401501	71401783	True	NR_033187,NM_001170747,NM_006223,NM_001024455	chrX,chrX,chrX,chrX	+,+,+,-	PIN4,PIN4,PIN4,RGAG4	-26,-26,-26,-49750
chr5:179639065-179640147	chr5	+	179639123	179640183	True	NM_015455,NM_175062	chr5,chr5	+,-	CNOT6,RASGEF1C	281233,-2993
chr5:154090993-154092398	chr5	+	154091078	154092374	True	NM_015315,NR_036094	chr5,chr5	+,-	LARP1,MIR3141	87,-115446
chr12:9436584-9436872	chr12	+	9436598	9436864	True	NR_036263,NR_024374	chr12,chr12	-,+	MIR1244-3,LOC642846	-44451,-396
chr12:9436584-9436872	chr12	-	9600205	9600405	False	NR_033399,NR_024374	chr12,chr12	-,+	DDX12,LOC642846	426,-164003
chr19:17392522-17392803	chr19	+	17392673	17392779	True	NM_152363,NM_031941	chr19,chr19	+,-	ANKLE1,USHBP1	-270,-17129
chr19:55278880-55279426	chr19	+	55279329	55279399	True	NM_014218,NM_001127255	chr19,chr19	+,-	KIR2DL1,NLRP7	1865,179528
chr11:64938665-64938896	chr11	+	64938707	64938859	True	NM_001008778,NM_172230,NM_001198868	chr11,chr11,chr11	+,-,+	SPDYC,SYVN1,CAPN1	-1051,-36704,9826
chr17:39768233-39768830	chr17	+	39768237	39768661	True	NM_005801,NM_005557	chr17,chr17	+,-	EIF1,KRT16	76465,468
chr22:16415012-16415319	chr22	+	16415018	16415244	True	NM_001005239,NR_001591	chr22,chr22	-,+	OR11H1,psiTPTE22	34614,667556
chr22:16415012-16415319	chr14	+	20147367	20147547	False	NM_001197287,NM_172194	chr14,chr14	-,+	OR11H2,OR4Q3	34998,68039
chr22:16415012-16415319	chr14	-	19412147	19412373	False	NM_001145442,NM_001013354	chr14,chr14	-,+	POTEM,OR11H12	607949,-34608
chr5:148407350-148407686	chr5	+	148407435	148407667	True	NM_024577,NM_014945	chr5,chr5	-,+	SH3TC2,ABLIM3	35120,113386
chr14:35760052-35760515	chr14	+	35760054	35760118	True	NM_002791,NM_020529	chr14,chr14	+,-	PSMA6,NFKBIA	1455,113892
chr17:686221-686735	chr17	+	686242	686578	True	NM_018146,NM_016080	chr17,chr17	+,-	RNMTL1,GLOD4	-787,-671
chr9:44760093-44760378	chr9	+	44760235	44760313	True	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	229922,-1129505
chr17:49337059-49337271	chr17	+	49337156	49337234	True	NM_017643,NM_016001	chr17,chr17	-,+	MBTD1,UTP18	243,662
chr11:132814248-132815768	chr11	+	132814435	132815487	True	NM_002545,NM_016522	chr11,chr11	-,+	OPCML,NTM	-1398,-1033774
chr12:121399309-121400015	chr12	+	121399485	121400047	True	NR_024345,NM_000545	chr12,chr12	-,+	NCRNA00262,HNF1A	10098,16501
chr7:29185787-29186093	chr7	+	29185787	29186139	True	NM_031311,NM_004067,NM_019029	chr7,chr7,chr7	-,+,-	CPVL,CHN2,CPVL	64,47981,64
chrX:70987617-70987900	chrX	+	70987667	70987843	True	NR_001568,NM_001145140,NM_001145139	chrX,chrX,chrX	-,+,+	BCYRN1,CXorf49,CXorf49B	-38705,-4578,-4578
chrX:70987617-70987900	chrX	-	70933431	70933607	False	NR_034005,NM_001145140,NM_001145139	chrX,chrX,chrX	+,-,-	FLJ46446,CXorf49,CXorf49B	-16436,4578,4578
chrX:119443840-119444865	chrX	+	119443846	119444763	True	NM_001104545,NM_001104544,NM_001142447,NM_017938	chrX,chrX,chrX,chrX	-,-,+,-	FAM70A,FAM70A,ATP1B4,FAM70A	678,678,51176,678
chr12:132906816-132908088	chr12	+	132907050	132908082	True	NM_001122636,NR_024563	chr12,chr12	-,+	GALNT9,LOC100130238	-1145,-55124
chr8:80942259-80942561	chr8	+	80942288	80942504	True	NM_007029,NM_014018	chr8,chr8	+,-	STMN2,MRPS28	-419290,52
chr3:45835513-45835965	chr3	+	45835538	45835958	True	NM_006641,NM_020208,NM_022405	chr3,chr3,chr3	+,-,-	CCR9,SLC6A20,SLC6A20	92037,2127,2127
chr1:119682898-119683216	chr1	+	119682975	119683255	True	NM_001005783,NM_201263,NM_015836	chr1,chr1,chr1	+,-,-	HAO2,WARS2,WARS2	228146,90,90
chr19:35783150-35783796	chr19	+	35783194	35783640	True	NM_001199216,NM_152481,NM_021175,NM_080600,NM_002361	chr19,chr19,chr19,chr19,chr19	+,-,+,+,+	MAG,FAM187B,HAMP,MAG,MAG	-256,-63566,-9835,-256,-256
chr19:9897280-9897807	chr19	+	9897499	9897663	True	NM_001048241,NM_001077624	chr19,chr19	+,-	UBL5,ZNF846	40904,-18089
chr15:30318450-30320184	chr15	+	30318607	30319939	True	NR_026859,NM_175610	chr15,chr15	+,-	FAM7A3,TJP1	75995,-203901
chr1:179924378-179924578	chr1	+	179924450	179924620	True	NM_014810,NM_022347	chr1,chr1	+,-	CEP350,TOR1AIP2	-593,-77509
chr1:153322486-153323449	chr1	+	153322541	153323446	True	NM_020393,NM_002965	chr1,chr1	-,+	PGLYRP4,S100A9	-1519,6883
chr11:67238791-67240737	chr11	+	67238805	67240605	True	NM_001078651,NM_001078650,NM_025124,NM_003977	chr11,chr11,chr11,chr11	-,-,-,+	TMEM134,TMEM134,TMEM134,AIP	-2074,-2074,-2074,9899
chr2:74122416-74122955	chr2	+	74122426	74122971	True	NM_001199893,NM_001615,NM_003584	chr2,chr2,chr2	+,+,-	ACTG2,ACTG2,DUSP11	-2384,-2384,-115142
chr1:162532469-162533246	chr1	+	162532473	162533149	True	NM_053282,NM_003115	chr1,chr1	-,+	SH2D1B,UAP1	-150545,-1229
chr12:4740540-4741965	chr12	+	4740587	4741790	True	NM_006422,NM_005002	chr12,chr12	-,+	AKAP3,NDUFA9	12609,16473
chr2:74648962-74649358	chr2	+	74649177	74649397	True	NM_001145054,NM_032118	chr2,chr2	-,+	C2orf81,WDR54	-4333,-343
chr10:5543377-5543668	chr10	+	5543453	5543713	True	NM_017422,NM_005185	chr10,chr10	-,+	CALML5,CALML3	-1920,23210
chr1:10005098-10005680	chr1	+	10005371	10005449	True	NM_032368,NM_022787	chr1,chr1	-,+	LZIC,NMNAT1	-2545,-1945
chr16:30664605-30664857	chr16	+	30664707	30664853	True	NM_138447,NM_024031	chr16,chr16	-,+	ZNF689,PRR14	-43025,-2517
chr11:67171992-67172556	chr11	+	67172070	67172546	True	NM_198517,NM_002708,NM_001008709,NM_206873	chr11,chr11,chr11,chr11	+,-,-,-	TBC1D10C,PPP1CA,PPP1CA,PPP1CA	-709,-2694,-2694,-2694
chr19:18303380-18303665	chr19	+	18303476	18303654	True	NM_002866,NM_032683	chr19,chr19	-,+	RAB3A,MPV17L2	11270,385
chr12:132567966-132568484	chr12	+	132568105	132568531	True	NM_175066,NR_003290	chr12,chr12	-,+	DDX51,EP400NL	60399,296
chr2:25391543-25391754	chr2	+	25391678	25391738	True	NM_001035256,NM_000939,NM_014971	chr2,chr2,chr2	-,-,+	POMC,POMC,EFR3B	-119,-119,-126756
chr1:46088910-46090687	chr1	+	46089118	46090378	True	NM_001190182,NM_001114938,NM_152298	chr1,chr1,chr1	-,-,+	CCDC17,CCDC17,NASP	-101,-101,-39509
chr18:43757686-43758656	chr18	+	43757926	43758210	True	NM_001008239,NM_145055,NM_001001937	chr18,chr18,chr18	+,+,-	C18orf25,C18orf25,ATP5A1	-3989,-3989,-73727
chr1:229768628-229770111	chr1	+	229768650	229769423	True	NM_014409,NM_001025247,NM_014777	chr1,chr1,chr1	-,-,+	TAF5L,TAF5L,URB2	-6856,-6856,-6731
chr10:43903020-43903236	chr10	+	43903027	43903231	True	NR_026693,NM_001098204,NM_001098205,NM_001098206,NM_004966	chr10,chr10,chr10,chr10,chr10	+,-,-,-,-	ZNF487P,HNRNPF,HNRNPF,HNRNPF,HNRNPF	29342,1515,1151,118,1475
chr1:150727984-150729283	chr1	+	150728240	150729166	True	NM_001199739,NM_004079,NM_001145415	chr1,chr1,chr1	-,-,+	CTSS,CTSS,SETDB1	9330,9330,169648
chr17:39743574-39744446	chr17	+	39743802	39744098	True	NM_005801,NM_000526	chr17,chr17	+,-	EIF1,KRT14	101028,-655
chr6:86303238-86303550	chr6	+	86303256	86303586	True	NM_153816,NM_002526,NM_020468	chr6,chr6,chr6	-,+,-	SNX14,NT5E,SNX14	93,-144005,93
chr6:70976815-70977184	chr6	+	70976819	70976991	True	NM_078485,NM_001105531	chr6,chr6	-,+	COL9A1,FAM135A	15970,146115
chr20:328517-328813	chr20	+	328620	328786	True	NM_153269,NM_024958	chr20,chr20	-,+	C20orf96,NRSN2	-57230,-1301
chr2:172965983-172966233	chr2	+	172966031	172966277	True	NM_178120,NM_004405	chr2,chr2	+,-	DLX1,DLX2	-15874,1251
chr2:37396929-37398101	chr2	+	37396991	37398079	True	NR_037879,NM_002759	chr2,chr2	+,-	LOC100505876,EIF2AK2	25555,-12801
chr15:65282311-65283606	chr15	+	65282479	65283473	True	NM_001127890,NM_178859,NM_001127889,NM_016630	chr15,chr15,chr15,chr15	-,+,-,-	SPG21,OSTBETA,SPG21,SPG21	-228,54234,-667,-228
chr11:67352293-67353608	chr11	+	67352682	67353632	True	NM_000852,NR_033791	chr11,chr11	+,-	GSTP1,DOC2GP	-1667,29553
chr10:103545024-103546336	chr10	+	103545130	103546251	True	NM_006993,NM_033164,NM_033165,NM_033163,NR_036114,NM_006119	chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,+,-	NPM3,FGF8,FGF8,FGF8,MIR3158-1,FGF8	-1960,-9371,-9371,-9371,-184007,-9371
chr11:76778992-76779468	chr11	+	76779003	76779453	True	NM_182833,NM_004055	chr11,chr11	-,+	GDPD4,CAPN5	219060,-1062
chr7:66310683-66312642	chr7	+	66310686	66312674	True	NR_003934,NM_017994	chr7,chr7	-,+	LOC729156,C7orf42	-873,73528
chr7:66310683-66312642	chr7	-	65956062	65956112	False	NM_001167961,NR_002933	chr7,chr7	+,-	KCTD7,LOC493754	137755,87436
chr1:201339098-201339526	chr1	+	201339184	201339504	True	NM_000364,NM_001005337,NM_001001431,NM_001001430,NM_001001432	chr1,chr1,chr1,chr1,chr1	-,+,-,-,-	TNNT2,PKP1,TNNT2,TNNT2,TNNT2	7351,-86655,7351,7351,7351
chr9:140354078-140354389	chr9	+	140354091	140354434	True	NM_001130971,NM_001130970,NM_006647,NM_001178064,NM_015537,NM_001130969	chr9,chr9,chr9,chr9,chr9,chr9	-,-,+,-,-,-	NELF,NELF,NOXA1,NELF,NELF,NELF	-305,-305,-36295,-305,-305,-305
chr6:148885717-148887166	chr6	+	148885882	148887150	True	NM_207360,NM_005715	chr6,chr6	-,+	ZC3H12D,UST	919048,181120
chr14:60865416-60866005	chr1	+	145509807	145510183	False	NR_002328,NM_005105,NM_003846,NM_001184795	chr1,chr1,chr1,chr1	-,+,+,+	GNRHR2,RBM8A,PEX11B,PEX11B	5943,-2314,5981,6376
chr14:60865416-60866005	chr14	+	60865462	60865972	True	NM_007374,NM_174978	chr14,chr14	+,-	SIX6,C14orf39	109965,86842
chr16:1525976-1526194	chr16	+	1526042	1526139	True	NM_001287,NM_001114331,NM_016111	chr16,chr16,chr16	-,-,+	CLCN7,CLCN7,TELO2	-957,-957,17212
chr11:1144299-1144573	chr11	+	1144359	1144613	True	NM_002457,NM_005961	chr11,chr11	+,-	MUC2,MUC6	-69535,-107653
chr1:87018419-87018825	chr1	+	87018506	87018858	True	NR_024602,NM_020729,NM_012128	chr1,chr1,chr1	+,-,+	CLCA4,ODF2L,CLCA4	-5806,-156481,-5806
chr21:44315446-44316425	chr21	+	44315883	44316079	True	NM_018669,NM_021075,NM_001001503	chr21,chr21,chr21	-,+,+	WDR4,NDUFV3,NDUFV3	-16205,-2561,-2561
chr5:111194063-111195389	chr5	+	111194087	111195212	True	NM_001142476,NR_015370	chr5,chr5	-,+	C5orf13,NCRNA00219	-100172,301010
chrX:124100365-124101276	chrX	+	124100608	124101187	True	NM_014253,NM_001163278,NM_001163279,NM_001195272	chrX,chrX,chrX,chrX	-,-,-,+	ODZ1,ODZ1,ODZ1,LOC100129520	-2942,-2942,-2942,352781
chr7:89783678-89784073	chr7	+	89783813	89784029	True	NM_012449,NM_152706	chr7,chr7	+,-	STEAP1,C7orf62	-175,-1358782
chr2:85637564-85638719	chr2	+	85637856	85638710	True	NM_001747,NM_198482	chr2,chr2	-,+	CAPG,SH2D6	-180,23207
chr1:6322245-6322785	chr1	+	6322332	6322704	True	NM_207370,NM_001024598	chr1,chr1	-,+	GPR153,HES3	-1297,-18131
chr17:19619389-19619874	chr17	+	19619421	19619801	True	NM_001099646,NM_000382,NM_152908	chr17,chr17,chr17	-,+,-	SLC47A2,ALDH3A2,SLC47A2	292,-67408,292
chr2:198511493-198512037	chr2	+	198511716	198511933	True	NM_144629,NM_138395	chr2,chr2	-,+	RFTN2,MARS2	28716,58094
chr14:45605313-45605530	chr14	+	45605376	45605566	True	NM_002013,NM_020937	chr14,chr14	-,+	FKBP3,FANCM	-1644,-291
chr3:196264237-196264625	chr3	+	196264338	196264662	True	NM_001105573,NM_001077657	chr3,chr3	+,-	FBXO45,C3orf43	31062,-22101
chrX:75004165-75004788	chrX	+	75004171	75004737	True	NM_016500,NM_138703	chrX,chrX	+,-	CXorf26,MAGEE2	388033,392
chr16:12896489-12896903	chr16	+	12896488	12896920	True	NM_001145205,NM_018340,NM_001099455	chr16,chr16,chr16	+,-,-	SHISA9,CPPED1,CPPED1	98556,874,874
chr3:123811755-123813502	chr3	+	123811877	123813403	True	NR_028136,NM_003947,NM_001024660,NM_017578	chr3,chr3,chr3,chr3	+,+,+,-	KALRN,KALRN,KALRN,ROPN1	154,154,154,-101678
chrX:69395911-69396940	chrX	+	69396042	69396959	True	NM_002565,NM_198512	chrX,chrX	-,+	P2RY4,DGAT2L6	82746,376
chr12:52466844-52468165	chr12	+	52466877	52467832	True	NM_001098673,NM_021934,NM_001081492	chr12,chr12,chr12	+,+,-	C12orf44,C12orf44,KRT80	-3170,-3170,118002
chr1:217309800-217310042	chr1	+	217309935	217310083	True	NM_001134285,NM_138796	chr1,chr1	-,+	ESRRG,SPATA17	1064,494611
chr3:52006175-52007151	chr3	+	52006714	52006850	True	NM_001174100,NR_027476,NM_033010,NM_001146314,NM_015407,NR_037192,NM_033008,NM_032750,NM_020418	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,+,+,-,-,-	PCBP4,ABHD14B,PCBP4,ABHD14B,ABHD14A,ABHD14A-ACY1,PCBP4,ABHD14B,PCBP4	-5232,1846,-9806,1846,2191,2191,-5232,1846,-5264
chrX:70935465-70936043	chrX	+	70935477	70935793	True	NR_034005,NM_001145140,NM_001145139	chrX,chrX,chrX	+,-,-	FLJ46446,CXorf49,CXorf49B	-18482,2392,2392
chrX:70935465-70936043	chrX	-	70985481	70985797	False	NR_001568,NM_001145140,NM_001145139	chrX,chrX,chrX	-,+,+	BCYRN1,CXorf49,CXorf49B	-36519,-2392,-2392
chr12:14134865-14135121	chr12	+	14134870	14135138	True	NM_000834,NM_018179	chr12,chr12	-,+	GRIN2B,ATF7IP	-1848,383472
chr20:38725753-38726391	chr20	+	38726011	38726072	True	NM_003286,NM_005461	chr20,chr20	+,-	TOP1,MAFB	931389,591861
chr17:56315929-56316559	chr17	+	56316004	56316549	True	NM_006151,NR_027647,NM_001160102,NM_001165927	chr17,chr17,chr17,chr17	+,+,+,-	LPO,LPO,LPO,MKS1	-268,-268,-268,-19038
chr6:15065855-15067545	chr6	+	15065911	15067536	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	178990,595804
chr1:948874-949231	chr1	+	948873	949217	True	NM_005101,NM_001142467,NM_198576	chr1,chr1,chr1	+,-,+	ISG15,HES4,AGRN	-77,-13321,6285
chr17:8151437-8151667	chr17	+	8151437	8151545	True	NM_025099,NM_012393	chr17,chr17	-,+	CTC1,PFAS	-24,1050
chr17:73266288-73266662	chr17	+	73266289	73266691	True	NM_015971,NR_036520,NM_001172703,NM_001172704,NM_138619,NM_020679,NR_033345,NM_014001	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,-,-,-,-,-,-	MRPS7,LOC100287042,GGA3,GGA3,GGA3,MIF4GD,GGA3,GGA3	-8591,688,-7845,-7845,-8582,662,-8582,-8582
chr18:32196261-32198078	chr18	+	32196420	32198087	True	NM_001198940,NM_003787	chr18,chr18	+,-	DTNA,NOL4	-23192,-392905
chr20:13971340-13973004	chr20	+	13971363	13972845	True	NM_080676,NM_025229	chr20,chr20	+,-	MACROD2,SEL1L2	3300,-101
chr21:47269241-47271148	chr21	+	47269611	47270929	True	NM_006657,NM_020528,NM_001130141	chr21,chr21,chr21	-,+,+	FTCD,PCBP3,PCBP3	304615,-40,-40
chr11:93475895-93476257	chr11	+	93475901	93476137	True	NM_024116,NR_031639,NR_002973,NM_014039,NR_002959,NR_003033	chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,+,-,-	TAF1D,MIR1304,SNORA40,C11orf54,SNORA18,SNORD5	-1198,-8971,-7499,-1159,-9138,-9435
chr11:26352782-26353616	chr11	+	26352945	26353520	True	NM_031418,NM_001135091	chr11,chr11	+,-	ANO3,MUC15	157,240345
chr12:7082213-7082758	chr12	+	7082291	7082728	True	NR_029779,NM_007273,NR_029682,NM_001144831,NR_003010,NM_006331	chr12,chr12,chr12,chr12,chr12,chr12	+,-,+,-,-,+	MIR200C,PHB2,MIR141,PHB2,SCARNA12,EMG1	-9480,-2400,-9082,-2375,-5522,-2398
chr12:102132436-102132887	chr12	+	102132679	102132845	True	NM_153694,NM_001177949,NM_001177948,NM_020244	chr12,chr12,chr12,chr12	-,-,-,+	SYCP3,SYCP3,SYCP3,CHPT1	455,455,455,-41313
chr4:13634250-13635176	chr4	+	13634366	13634878	True	NM_148894,NR_003132	chr4,chr4	-,+	BOD1L,HSP90AB2P	-5038,-299386
chr7:107306300-107307489	chr7	+	107306368	107307510	True	NM_000441,NR_028137	chr7,chr7	+,-	SLC26A4,LOC286002	-5346,-4125
chr5:178451825-178452484	chr5	+	178451866	178452126	True	NM_001136116,NM_000843	chr5,chr5	+,-	ZNF879,GRM6	-1141,-29742
chr3:11889687-11890607	chr3	+	11889687	11890627	True	NM_138807,NM_003178	chr3,chr3	-,+	C3orf31,SYN2	-1335,155234
chr19:56703283-56705051	chr19	+	56703365	56704927	True	NM_033106,NM_001080456	chr19,chr19	+,-	GALP,ZSCAN5B	-16034,-34
chr6:35308565-35309400	chr6	+	35308840	35309104	True	NM_001171819,NM_006238,NM_003214,NM_001171820,NM_001171818,NM_177435	chr6,chr6,chr6,chr6,chr6,chr6	+,+,-,+,+,+	PPARD,PPARD,TEAD3,PPARD,PPARD,PPARD	1230,1230,155813,1230,1230,1230
chr17:79905234-79906856	chr17	+	79905406	79906531	True	NM_001145113,NR_015454	chr17,chr17	-,+	MYADML2,LOC92659	-297,-19752
chr6:117737129-117738207	chr6	+	117737175	117738075	True	NM_173674,NM_002944	chr6,chr6	+,-	DCBLD1,ROS1	65744,8993
chr8:37888987-37889332	chr8	+	37888996	37889326	True	NM_000025,NM_004095	chr8,chr8	-,+	ADRB3,EIF4EBP1	-64812,-1027
chr15:52312467-52314268	chr15	+	52312582	52313764	True	NM_138792,NM_002748	chr15,chr15	-,+	LEO1,MAPK6	-48624,-1232
chr19:56048212-56048444	chr19	+	56048248	56048492	True	NM_001144950,NM_001199824,NM_001101401	chr19,chr19,chr19	+,-,-	SSC5D,LOC100130827,SBK2	-48429,8467,-1
chr16:18582516-18582739	chr16	+	18582521	18582711	True	NR_003569,NM_173614,NM_001004060	chr16,chr16,chr16	+,-,-	ABCC6P1,NOMO2,NOMO2	-2,-9087,-9087
chr16:18582516-18582739	chr16	-	14918412	14918602	False	NR_023387,NM_014287	chr16,chr16	-,+	ABCC6P2,NOMO1	7,9040
chr16:18582516-18582739	chr16	-	16317177	16317367	False	NM_001171,NM_001079528,NM_001004067	chr16,chr16,chr16	-,-,+	ABCC6,ABCC6,NOMO3	11,11,9021
chr21:31653350-31654183	chr21	+	31653674	31654232	True	NM_181599,NM_001085455,NM_001128598	chr21,chr21,chr21	+,-,-	KRTAP13-1,KRTAP24-1,KRTAP25-1	114159,1100,7656
chr6:100396243-100396852	chr6	+	100396303	100396841	True	NM_021620,NM_001040179	chr6,chr6	+,-	PRDM13,MCHR2	-341704,45308
chr6:7729321-7729755	chr6	+	7729348	7729755	True	NM_001145549,NM_001718	chr6,chr6	-,+	TXNDC5,BMP6	180605,-2388
chr12:21445771-21446091	chr12	+	21445818	21445970	True	NM_021094,NM_000415	chr12,chr12	-,+	SLCO1A2,IAPP	41920,79831
chr2:183385517-183386685	chr2	+	183385605	183386723	True	NM_018981,NM_001003683,NM_005019	chr2,chr2,chr2	+,-,-	DNAJC10,PDE1A,PDE1A	194275,792,580
chr1:44436053-44436417	chr1	+	44436175	44436357	True	NM_001384,NM_001005417,NM_003780,NM_004047,NM_001039457,NM_006934,NM_001039589	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-,+	DPH2,B4GALT2,B4GALT2,ATP6V0B,ATP6V0B,SLC6A9,DPH2	-573,9825,8508,4244,4244,46690,-573
chr12:58119977-58120278	chr12	+	58120067	58120307	True	NM_001122772,NR_027032	chr12,chr12	-,+	AGAP2,LOC100130776	11772,-95
chr21:44751537-44752951	chr21	+	44751599	44752811	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	117092,94241
chr10:23218772-23219947	chr10	+	23218810	23219783	True	NM_005028,NM_173081	chr10,chr10	-,+	PIP4K2A,ARMC3	-215307,-1915
chr2:191015415-191016447	chr2	+	191015424	191016447	True	NM_005259,NM_001042520	chr2,chr2	-,+	MSTN,C2orf88	-87969,-503
chr12:93159327-93160250	chr12	+	93159721	93160264	True	NM_001004330,NM_003566	chr12,chr12	+,-	PLEKHG7,EEA1	-29508,162900
chr3:193940555-193941640	chr3	+	193940716	193941660	True	NR_024480,NM_005524	chr3,chr3	-,+	LOC100131551,HES1	88983,-86836
chr2:170653598-170654833	chr2	+	170653608	170654854	True	NM_003142,NM_014168	chr2,chr2	+,-	SSB,METTL5	534,26556
chr3:155586842-155588014	chr3	+	155587140	155587966	True	NM_003875,NM_004733	chr3,chr3	+,-	GMPS,SLC33A1	358,-14892
chr19:55575258-55575510	chr19	+	55575359	55575517	True	NR_027382,NM_001145971,NR_027381,NM_138412,NM_133180	chr19,chr19,chr19,chr19,chr19	-,-,-,-,+	RDH13,RDH13,RDH13,RDH13,EPS8L1	-774,-774,-774,5447,11703
chr2:25900178-25900566	chr2	+	25900325	25900468	True	NM_183360,NM_183361,NM_033147,NM_016131,NM_021907,NM_033148	chr2,chr2,chr2,chr2,chr2,chr2	-,-,-,+,-,-	DTNB,DTNB,DTNB,RAB10,DTNB,DTNB	-3822,-3822,-3822,356260,-3822,-3822
chr22:19712087-19712815	chr22	+	19712252	19712500	True	NM_000407,NM_001009939,NM_024627,NR_037611,NR_037612	chr22,chr22,chr22,chr22,chr22	+,+,-,+,+	GP1BB,SEPT5,C22orf29,SEPT5-GP1BB,SEPT5-GP1BB	-1237,-6345,129921,-7560,-6311
chr11:64612343-64612557	chr11	+	64612424	64612606	True	NM_017525,NM_006244	chr11,chr11	-,+	CDC42BPG,PPP2R5B	-383,79536
chr9:32942049-32942814	chr9	+	32942184	32942827	True	NM_001539,NM_001195249	chr9,chr9	+,-	DNAJA1,APTX	82381,58797
chr16:1429139-1429421	chr16	+	1429143	1429465	True	NM_032520,NM_001193389,NM_023076	chr16,chr16,chr16	+,-,-	GNPTG,UNKL,UNKL	-27294,269,269
chr15:42652377-42652958	chr15	+	42652461	42652973	True	NM_173087,NM_000070,NM_024344,NM_001110503	chr15,chr15,chr15,chr15	+,+,+,-	CAPN3,CAPN3,CAPN3,TMEM87A	-814,-814,-814,-86706
chr11:14913627-14913955	chr11	+	14913734	14914002	True	NM_024514,NM_000728	chr11,chr11	-,+	CYP2R1,CALCB	17,181143
chr1:145710218-145712193	chr1	+	145710995	145712162	True	NM_001201325,NM_007053	chr1,chr1	+,-	PDZK1,CD160	15503,3460
chr12:56511727-56511980	chr12	+	56511732	56512010	True	NM_001130420,NM_021104,NM_001184796,NM_015292,NM_032786,NM_001035267	chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,+,+,+	SMARCC2,RPL41,ESYT1,ESYT1,ZC3H10,RPL41	71391,-1409,9975,9975,19,-1409
chr19:55721088-55721452	chr19	+	55721160	55721460	True	NM_032430,NM_001161440,NM_002842	chr19,chr19,chr19	+,-,-	BRSK1,PTPRH,PTPRH	74073,-286,-286
chr1:207697329-207697647	chr1	+	207697357	207697694	True	NM_000651,NR_029832	chr1,chr1	+,-	CR1,MIR29C	-27935,277649
chr1:168262024-168262275	chr1	+	168262154	168262262	True	NR_026844,NM_005149	chr1,chr1	-,+	ANKRD36BP1,TBX19	-45486,-11929
chr2:95779832-95780093	chr2	+	95779943	95780008	True	NM_031902,NM_001017396	chr2,chr2	-,+	MRPS5,ZNF2	7799,51174
chr12:98992832-98994171	chr12	+	98993281	98993927	True	NM_005888,NR_003015,NM_002635,NM_213611,NM_201612	chr12,chr12,chr12,chr12,chr12	+,+,+,+,-	SLC25A3,SNORA53,SLC25A3,SLC25A3,IKBIP	-5929,-35,-5929,-5929,44720
chr1:20446970-20447442	chr1	+	20447266	20447433	True	NM_022819,NM_012400	chr1,chr1	+,-	PLA2G2F,PLA2G2D	18389,-1258
chr1:171077372-171078976	chr1	+	171077379	171079023	True	NR_031627,NM_006894	chr1,chr1	-,+	MIR1295,FMO3	-6432,-17413
chr7:48082470-48083449	chr7	+	48082516	48083480	True	NM_152782,NM_001100159	chr7,chr7	-,+	SUN3,C7orf57	-13800,-7450
chr11:44129705-44130011	chr11	+	44129718	44130032	True	NM_021926,NM_000401	chr11,chr11	-,+	ALX4,EXT2	201734,-12022
chr16:30962282-30963586	chr16	+	30962374	30963322	True	NM_014712,NM_152288,NR_024348	chr16,chr16,chr16	+,+,-	SETD1A,ORAI3,FBXL19-AS1	5292,-2020,-27784
chr2:131514177-131514586	chr2	+	131514183	131514589	True	NM_001105193,NM_001079530,NM_001105195,NM_001105194,NM_152698	chr2,chr2,chr2,chr2,chr2	+,-,+,+,+	FAM123C,CFC1B,FAM123C,FAM123C,FAM123C	-1010,-156932,-370,-370,-1157
chr16:66956248-66956676	chr16	+	66956319	66956576	True	NM_003869,NM_001204746,NM_001204744,NM_001204745,NM_001128850,NM_004165,NM_004062	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,-,-,-,-	CES2,CDH16,CDH16,CDH16,RRAD,RRAD,CDH16	11770,-3432,-3432,-3432,2918,2918,-3432
chr1:171750801-171751018	chr1	+	171750800	171751018	True	NM_001007239,NM_014955,NM_015935,NR_033704	chr1,chr1,chr1,chr1	+,+,+,-	METTL13,METTL13,METTL13,VAMP4	-90,-90,-90,-39421
chr20:33562662-33563609	chr20	+	33562699	33563497	True	NR_030223,NM_000178	chr20,chr20	+,-	MIR499,GSS	14681,-19098
chr14:91313859-91314330	chr14	+	91313973	91314363	True	NM_001010854,NM_001102366	chr14,chr14	-,+	TTC7B,C14orf159	-31212,265993
chr22:32445998-32446802	chr22	+	32446085	32446793	True	NM_015372,NR_033411,NM_000343	chr22,chr22,chr22	-,+,+	C22orf24,SLC5A1,SLC5A1	-104749,8363,-7117
chr5:176788804-176789471	chr5	+	176789145	176789409	True	NM_006816,NM_006480	chr5,chr5	-,+	LMAN2,RGS14	-10260,-4352
chr9:141106788-141107524	chr7	-	35980	36031	False	NM_002607,NM_020223	chr7,chr7	-,+	PDGFA,FAM20C	523501,156937
chr9:141106788-141107524	chr3	+	197879487	197879634	True	NR_003291	chr3	-	LOC348840	-71945
chr12:122062864-122063141	chr12	+	122062863	122063108	True	NM_032590,NM_032790	chr12,chr12	-,+	KDM2B,ORAI1	-43943,1346
chr18:71957336-71958350	chr18	+	71957385	71958303	True	NM_001914,NM_148923,NM_001190807,NM_001174123	chr18,chr18,chr18,chr18	-,-,-,+	CYB5A,CYB5A,CYB5A,DKFZP781G0119	998,998,998,24806
chr17:76975552-76976089	chr17	+	76975901	76976113	True	NM_005567,NM_030968	chr17,chr17	-,+	LGALS3BP,C1QTNF1	-2,44137
chr16:21719821-21720670	chr16	+	21719954	21720219	True	NM_170664,NM_005849	chr16,chr16	+,-	OTOA,IGSF6	-3721,-55982
chr12:3072610-3073195	chr12	+	3072626	3073132	True	NM_003213,NM_202003,NM_201443,NM_201441	chr12,chr12,chr12,chr12	+,-,+,+	TEAD4,FOXM1,TEAD4,TEAD4	-4199,-86323,-3929,-4199
chr11:60720091-60720295	chr11	+	60720100	60720274	True	NR_027391,NM_006725,NM_016582	chr11,chr11,chr11	-,+,-	SLC15A3,CD6,SLC15A3	-843,18840,-843
chr9:131536629-131537596	chr9	+	131536829	131536912	True	NM_006336,NM_018201	chr9,chr9	-,+	ZER1,TBC1D13	-2631,12597
chr17:4271457-4272713	chr17	+	4271533	4272248	True	NM_003342,NM_182538	chr17,chr17	-,+	UBE2G1,SPNS3	-1564,64970
chr9:117694655-117695956	chr9	+	117694820	117695998	True	NM_017418,NM_001244	chr9,chr9	+,-	DEC1,TNFSF8	208098,-2050
chr12:132569427-132569739	chr12	+	132569498	132569786	True	NM_175066,NR_003290	chr12,chr12	-,+	DDX51,EP400NL	59146,-721
chr3:172475738-172477527	chr3	+	172475966	172477579	True	NM_018098,NM_020792	chr3,chr3	+,-	ECT2,NCEH1	-3730,-46958
chr14:81376846-81377562	chr14	+	81377040	81377529	True	NM_152446,NM_001018036	chr14,chr14	-,+	C14orf145,TSHR	28414,44339
chr8:125989883-125991818	chr8	+	125989944	125991388	True	NM_014846,NM_152412	chr8,chr8	-,+	KIAA0196,ZNF572	112723,-4457
chr13:47127805-47128036	chr13	+	47127879	47128001	True	NM_001164213,NM_001164211,NM_025113,NM_015116	chr13,chr13,chr13,chr13	+,+,-,+	LRCH1,LRCH1,C13orf18,LRCH1	-634,-634,-166244,-634
chr20:390359-392006	chr20	+	390362	391670	True	NM_144628,NM_031229,NM_006462	chr20,chr20,chr20	-,+,+	TBC1D20,RBCK1,RBCK1	51568,-1704,-1704
chr1:160256342-160256919	chr1	+	160256440	160256802	True	NR_036492,NR_002190,NM_002857,NM_001193644,NR_036493	chr1,chr1,chr1,chr1,chr1	-,+,-,-,-	PEX19,SUMO1P3,PEX19,PEX19,PEX19	-1499,30252,-1499,-1499,-1499
chr19:12167311-12167544	chr19	+	12167358	12167446	True	NM_001136501,NM_001080404	chr19,chr19	+,-	ZNF844,ZNF878	8099,-231
chr12:50099948-50100446	chr12	+	50099962	50100296	True	NM_198900,NM_175736,NM_003217	chr12,chr12,chr12	-,-,+	FMNL3,FMNL3,TMBIM6	951,951,34996
chr6:84936970-84937183	chr6	+	84937011	84937079	True	NM_014895,NM_138409	chr6,chr6	-,+	KIAA1009,MRAP2	306,-193642
chr6:24909723-24910121	chr6	+	24909737	24910087	True	NM_015895,NM_014722	chr6,chr6	+,-	GMNN,FAM65B	-134624,1158
chr1:152007238-152008141	chr1	+	152007303	152008120	True	NR_024237,NM_005620	chr1,chr1	+,-	LOC100132111,S100A11	-196416,1442
chrX:6452504-6452925	chrY	+	16098425	16098495	False	NM_181880,NM_004679	chrY,chrY	-,-	VCY1B,VCY	-37,-33
chrX:6452504-6452925	chrY	-	16167994	16168064	False	NM_181880,NM_004679	chrY,chrY	+,+	VCY1B,VCY	37,33
chrX:6452504-6452925	chrX	+	6452643	6452727	True	NM_000351,NM_016379	chrX,chrX	+,-	STS,VCX3A	684744,482
chr3:8697194-8698463	chr3	+	8697332	8698358	True	NM_033337,NM_015931	chr3,chr3	+,-	CAV3,C3orf32	77127,-3595
chr15:67278247-67279543	chr15	+	67278412	67279362	True	NM_005902,NM_024666	chr15,chr15	+,-	SMAD3,AAGAB	78832,267762
chr13:53023333-53024216	chr13	+	53023548	53024154	True	NM_001098525,NM_018204,NM_016075	chr13,chr13,chr13	+,+,-	CKAP2,CKAP2,VPS36	5340,5340,659
chr17:60706494-60706751	chr17	+	60706617	60706783	True	NM_001100875,NM_006039	chr17,chr17	-,+	MARCH10,MRC2	177278,-1906
chr10:98273909-98274262	chr10	+	98273939	98274281	True	NM_004088,NM_012465	chr10,chr10	+,-	DNTT,TLL2	-209905,-256
chr11:3252317-3253023	chr11	+	3252361	3253005	True	NR_027138,NM_001039165	chr11,chr11	+,-	C11orf36,MRGPRE	-12850,661
chr4:49304731-49305325	chr4	+	49304859	49304935	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-316658,-396044
chr4:49304731-49305325	chr4	-	49320623	49320699	False	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-332409,-411808
chr19:508888-509274	chr19	+	508955	509303	True	NM_033513,NM_182577	chr19,chr19	+,-	C19orf20,ODF3L2	-1509,-33972
chr10:27438723-27440664	chr10	+	27439180	27440533	True	NM_032844,NM_014263,NM_001172304,NM_001172303,NM_139312	chr10,chr10,chr10,chr10,chr10	+,-,+,+,-	MASTL,YME1L1,MASTL,MASTL,YME1L1	3219,2839,3219,3219,2839
chr1:6447163-6448259	chr1	+	6447166	6447985	True	NM_007274,NM_181864,NM_031475	chr1,chr1,chr1	-,-,+	ACOT7,ACOT7,ESPN	5891,-1283,36862
chr12:3189592-3190478	chr12	+	3189960	3190502	True	NM_202003,NM_006675,NM_001168320	chr12,chr12,chr12	-,+,+	FOXM1,TSPAN9,TSPAN9	-203657,-3490,-3490
chr16:66403606-66405269	chr16	+	66403640	66405092	True	NM_001795,NM_001172643	chr16,chr16	+,-	CDH5,TK2	-3166,179152
chr7:24785965-24787937	chr7	+	24786031	24787233	True	NM_016447,NM_001127453	chr7,chr7	+,-	MPP6,DFNA5	-172998,9908
chr15:31286279-31287793	chr15	+	31286429	31287578	True	NM_017762,NM_014967	chr15,chr15	-,+	MTMR10,FAN1	-2622,-90405
chr5:140768337-140768792	chr5	+	140768386	140768828	True	NM_018925,NM_018920,NM_003736,NM_032099,NM_032098,NM_032088,NM_005642,NM_014004,NM_032087	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,-,+,+	PCDHGB5,PCDHGA7,PCDHGB4,PCDHGB5,PCDHGB4,PCDHGA8,TAF7,PCDHGA8,PCDHGA7	8866,-5970,-985,8866,-985,2654,-68035,2654,-5970
chr17:76123901-76124134	chr17	+	76123900	76124138	True	NM_152468,NM_001127198,NM_007267	chr17,chr17,chr17	+,-,-	TMC8,TMC6,TMC6	2720,773,4400
chr16:89225719-89225947	chr16	+	89225724	89225980	True	NR_024347,NM_005187	chr16,chr16	+,-	C16orf81,CBFA2T3	-147,-182220
chr12:12227226-12228656	chr12	+	12227272	12228702	True	NM_138722,NM_138723,NM_030766,NM_002336	chr12,chr12,chr12,chr12	+,+,+,-	BCL2L14,BCL2L14,BCL2L14,LRP6	-2921,-3445,-2921,191160
chr11:64051736-64051988	chr11	+	64051794	64051886	True	NM_020155,NM_001170881,NM_001170880,NM_004322,NM_001177358,NM_001170726,NM_033310,NM_032989	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,-,+,+,+,-	GPR137,GPR137,GPR137,BAD,GPR137,GPR137,KCNK4,BAD	1695,398,1695,340,396,-34,6906,340
chr12:53894535-53894854	chr12	+	53894641	53894797	True	NM_003717,NM_004178,NM_134323,NM_001193511,NM_134324,NM_006301	chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,-,+,-	NPFF,TARBP2,TARBP2,MAP3K12,TARBP2,MAP3K12	6675,-1,-1,-1197,579,-1197
chr12:100379002-100379876	chr12	+	100379044	100379875	True	NM_152788,NR_031728	chr12,chr12	-,+	ANKS1B,MIR1827	-612,203786
chr15:51203011-51203770	chr15	+	51203269	51203664	True	NM_032802,NM_007347	chr15,chr15	-,+	SPPL2A,AP4E1	-145359,-2375
chr17:6349926-6350522	chr17	+	6349993	6350371	True	NM_019013,NM_014336,NM_001195228	chr17,chr17,chr17	+,-,+	FAM64A,AIPL1,FAM64A	-2309,-11474,-2309
chr7:11027565-11029533	chr7	+	11027702	11028932	True	NM_002489,NR_033436	chr7,chr7	-,+	NDUFA4,PHF14	-47889,-14262
chr12:26122182-26122691	chr12	+	26122201	26122737	True	NR_036188,NM_001164747	chr12,chr12	-,+	MIR4302,RASSF8	-95189,3950
chr11:128391807-128392045	chr11	+	128391818	128392036	True	NM_001162422,NM_001167681,NM_005238	chr11,chr11,chr11	-,+,-	ETS1,FLI1,ETS1	220,171774,220
chr14:74058800-74059088	chr14	+	74058913	74058983	True	NM_152331,NM_203309	chr14,chr14	+,-	ACOT4,HEATR4	-554,-33262
chr9:113018110-113018312	chr9	+	113018155	113018215	True	NM_001136562,NM_003329	chr9,chr9	+,-	AKAP2,TXN	-130425,613
chr2:54198487-54199166	chr2	+	54198524	54199106	True	NM_014614,NM_138448	chr2,chr2	-,+	PSME4,ACYP2	-547,143303
chr16:68770410-68770942	chr16	+	68770883	68770943	True	NM_004360,NM_018667	chr16,chr16	+,-	CDH1,SMPD3	251,-288474
chr17:29057584-29058140	chr19	-	14296495	14296555	False	NR_024282,NM_001008701	chr19,chr19	+,-	LOC113230,LPHN1	-112725,20492
chr17:29057584-29058140	chr17	+	29057593	29057945	True	NM_015986,NR_024187	chr17,chr17	-,+	CRLF3,SUZ12P	93883,-21018
chr1:211433304-211433579	chr1	+	211433325	211433518	True	NM_001136225,NM_001136224,NM_172362,NM_001136223,NM_018254	chr1,chr1,chr1,chr1,chr1	+,+,-,+,+	RCOR3,RCOR3,KCNH1,RCOR3,RCOR3	-668,-668,-125868,-668,-87
chr10:73848206-73848575	chr10	+	73848225	73848547	True	NM_001134434,NM_004273,NM_014767	chr10,chr10,chr10	-,+,-	SPOCK2,CHST3,SPOCK2	293,-124156,293
chr4:142054516-142055258	chr4	+	142054747	142055278	True	NM_020724,NM_014487	chr4,chr4	-,+	RNF150,ZNF330	-131,86770
chr8:37963237-37963676	chr8	+	37963244	37963694	True	NM_004674,NM_000349,NM_001105214	chr8,chr8,chr8	+,-,+	ASH2L,STAR,ASH2L	-284,44956,54
chr2:55258112-55260019	chr2	+	55258328	55259636	True	NM_207521,NM_001135592	chr2,chr2	-,+	RTN4,RPS27A	16749,199402
chr7:141690576-141691140	chr7	+	141690589	141691116	True	NM_004668,NM_176817	chr7,chr7	+,-	MGAM,TAS2R38	4562,-17016
chr19:31636662-31637102	chr19	+	31636662	31637008	True	NM_020856,NR_026894	chr19,chr19	-,+	TSHZ3,DKFZp566F0947	203232,3774
chr16:29937112-29937329	chr16	+	29937154	29937244	True	NM_178863,NM_181718	chr16,chr16	-,+	KCTD13,ASPHD1	351,-25058
chr16:69460325-69461821	chr16	+	69460663	69461398	True	NM_030579,NM_005652	chr16,chr16	+,-	CYB5B,TERF2	-2226,-40789
chr5:140594463-140595309	chr5	+	140594543	140595035	True	NM_018934,NM_018932,NM_018933,NM_031947	chr5,chr5,chr5,chr5	+,+,+,-	PCDHB14,PCDHB12,PCDHB13,SLC25A2	8042,-6310,-1092,88627
chr3:184094052-184094352	chr3	+	184094162	184094361	True	NM_001177598,NM_003741,NM_000460,NM_001177597	chr3,chr3,chr3,chr3	-,+,-,-	THPO,CHRD,THPO,THPO	1622,3499,1622,1622
chr10:135192532-135192753	chr10	+	135192740	135192802	True	NM_207127,NR_037509,NM_004092,NM_152911,NM_207128	chr10,chr10,chr10,chr10,chr10	+,-,-,+,+	PAOX,MIR3944,ECHS1,PAOX,PAOX	-50,-7573,-5832,-50,-50
chr17:26800332-26800892	chr17	+	26800423	26800802	True	NM_080669,NM_003984,NM_001145976,NM_001145975,NR_027384	chr17,chr17,chr17,chr17,chr17	-,+,+,+,+	SLC46A1,SLC13A2,SLC13A2,SLC13A2,SLC13A2	-67195,13,13,13,13
chr4:17812132-17812333	chr4	+	17812131	17812275	True	NM_017741,NM_022346	chr4,chr4	-,+	DCAF16,NCAPG	156,249
chr3:195381512-195381902	chr3	+	195381516	195381880	True	NM_001647,NR_003265	chr3,chr3	-,+	APOD,SDHAP2	-70440,3029
chr3:195381512-195381902	chr3	-	195720361	195720419	False	NR_034088,NR_003264	chr3,chr3	+,-	LOC401109,SDHAP1	149087,-3211
chr5:35918204-35919606	chr5	+	35918860	35919645	True	NM_002185,NM_001042625	chr5,chr5	+,-	IL7R,CAPSL	-61931,19142
chr6:89914135-89915504	chr6	+	89914165	89915449	True	NM_001010853,NM_002042	chr6,chr6	+,-	PM20D2,GABRR1	-58447,12097
chr20:34329249-34329509	chr20	+	34329253	34329537	True	NM_184234,NM_004902,NM_016436	chr20,chr20,chr20	-,-,+	RBM39,RBM39,PHF20	706,706,30385
chr7:107747463-107747700	chr7	+	107747462	107747662	True	NM_007356,NM_000108	chr7,chr7	-,+	LAMB4,DLD	23189,-215935
chr9:114657860-114658549	chr9	+	114658313	114658593	True	NM_003358,NM_173521	chr9,chr9	+,-	UGCG,C9orf84	612,-112534
chr11:117017432-117017700	chr11	+	117017624	117017686	True	NM_001184747,NM_001184746,NM_001184748,NM_025164,NM_002572	chr11,chr11,chr11,chr11,chr11	+,+,+,-,+	PAFAH1B2,PAFAH1B2,PAFAH1B2,SIK3,PAFAH1B2	-2675,-2675,-2675,-48631,-2675
chr16:85618559-85618845	chr16	+	85618591	85618797	True	NM_001134473,NM_016095	chr16,chr16	+,-	KIAA0182,GINS2	26231,103841
chr5:179229198-179229462	chr5	+	179229211	179229447	True	NR_031598,NM_054013,NM_145867,NM_001142299,NM_001142298,NM_014275	chr5,chr5,chr5,chr5,chr5,chr5	-,-,+,+,+,-	MIR1229,MGAT4B,LTC4S,SQSTM1,SQSTM1,MGAT4B	-3865,478,-8277,4555,3940,4555
chr3:10029015-10029294	chr3	+	10029193	10029308	True	NM_018447,NM_033084	chr3,chr3	-,+	TMEM111,FANCD2	-671,38804
chr11:73020705-73021163	chr11	+	73020764	73021116	True	NM_014824,NM_014786	chr11,chr11	-,+	FCHSD2,ARHGEF17	-167621,-1152
chr22:43041746-43041960	chr22	+	43041750	43042000	True	NM_001171660,NM_001171661,NM_001129819,NM_000398,NM_007326,NR_029422,NM_001165877	chr22,chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,-,+,-	CYB5R3,CYB5R3,CYB5R3,CYB5R3,CYB5R3,RNU12,ATP5L2	-1110,1045,1045,3455,1045,-30550,-5143
chr7:30793913-30795125	chr7	+	30794378	30795112	True	NM_001202481,NM_006774,NR_037598,NM_001199219	chr7,chr7,chr7,chr7	-,+,+,+	CRHR2,INMT,INMT-FAM188B,INMT	-54659,-2686,-2686,-2686
chr2:32504334-32504557	chr2	+	32504344	32504414	True	NM_032312,NM_021209	chr2,chr2	+,-	YIPF4,NLRC4	-1444,-13532
chr22:41778490-41778693	chr22	+	41778495	41778687	True	NM_003216,NM_016272	chr22,chr22	+,-	TEF,TOB2	-583,64390
chr6:56688299-56689015	chr6	+	56688568	56688776	True	NM_152731,NM_001723	chr6,chr6	+,-	BEND6,DST	130996,-180874
chr14:78263026-78263940	chr14	+	78263381	78263691	True	NM_020421,NM_012245,NM_001142545	chr14,chr14,chr14	+,-,+	ADCK1,SNW1,ADCK1	2734,-35884,2734
chr11:62472986-62473591	chr11	+	62473145	62473539	True	NM_001130702,NR_037949,NR_037948,NM_001122955,NM_012202,NM_032667	chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,+,-	BSCL2,BSCL2,BSCL2,BSCL2,GNG3,BSCL2	298,3602,3602,1690,1574,298
chr3:154143794-154145714	chr3	+	154144170	154145748	True	NM_001038705,NM_015595	chr3,chr3	-,+	GPR149,ARHGEF26	1806,-305085
chr19:42084095-42084563	chr19	+	42084098	42084582	True	NM_001098506,NM_033543,NM_001817	chr19,chr19,chr19	+,+,-	CEACAM21,CEACAM21,CEACAM4	-1618,-1618,48910
chr18:74522504-74523644	chr18	+	74522595	74523682	True	NM_007345,NM_001025081	chr18,chr18	+,-	ZNF236,MBP	12433,205423
chr7:129912716-129912995	chr7	+	129912849	129913041	True	NM_001869,NM_032842	chr7,chr7	+,-	CPA2,TMEM209	-6214,-67511
chr19:50268575-50270191	chr19	+	50268748	50270111	True	NM_021733,NM_130787,NM_014203	chr19,chr19,chr19	-,+,+	TSKS,AP2A1,AP2A1	-2233,68,68
chr5:180469255-180469801	chr5	+	180469360	180469745	True	NM_152547,NM_203297	chr5,chr5	+,-	BTNL9,TRIM7	-2192,158240
chr8:22783647-22784493	chr8	+	22783777	22784535	True	NM_144962,NM_001160036	chr8,chr8	-,+	PEBP4,RHOBTB2	936,60394
chr17:9730345-9731079	chr17	+	9730563	9731003	True	NM_001105571,NM_004246	chr17,chr17	-,+	DHRS7C,GLP2R	-35962,-1234
chr15:64443599-64443829	chr15	+	64443626	64443740	True	NM_024798,NM_000942	chr15,chr15	+,-	SNX22,PPIB	175,11664
chr11:56040940-56042756	chr11	+	56041405	56042734	True	NM_001004745,NM_001005199	chr11,chr11	+,-	OR5T1,OR8H1	380,15854
chr12:123458865-123459103	chr12	+	123458892	123459105	True	NM_203444,NM_024623,NM_018694,NM_001002251,NM_001002252,NM_019625,NM_019624,NM_016638	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,+,+,-,-,+	ABCB9,OGFOD2,ARL6IP4,ARL6IP4,ARL6IP4,ABCB9,ABCB9,ARL6IP4	698,248,5774,5774,5774,-7836,-7836,5774
chr19:11374533-11374993	chr19	+	11374532	11374703	True	NM_020812,NM_018687	chr19,chr19	-,+	DOCK6,LOC55908	-1375,-24288
chr8:133886271-133887146	chr8	+	133886594	133887128	True	NM_003235,NM_144649	chr8,chr8	+,-	TG,TMEM71	-7440,-113680
chr6:37225741-37225947	chr6	+	37225776	37225924	True	NM_001162900,NM_017772,NM_145316	chr6,chr6,chr6	-,+,-	TMEM217,TBC1D22B,TMEM217	57,-279,-363
chr7:138483552-138484241	chr7	+	138483551	138484231	True	NM_020632,NM_130840,NM_001085429	chr7,chr7,chr7	-,-,+	ATP6V0A4,ATP6V0A4,TMEM213	-610,-610,-863
chr19:49110758-49111860	chr19	+	49110813	49111240	True	NM_017708,NM_133498	chr19,chr19	-,+	FAM83E,SPACA4	5511,-864
chr16:81479347-81479835	chr16	+	81479354	81479863	True	NM_001076780,NM_198390	chr16,chr16	-,+	PKD1L2,CMIP	-225379,-630
chr16:57220111-57220338	chr16	+	57220112	57220312	True	NM_133368,NM_024946	chr16,chr16	+,-	RSPRY1,FAM192A	-50,-136
chr1:161601719-161603017	chr1	+	161602260	161602777	True	NR_024151,NM_000570	chr1,chr1	+,-	HSPA7,FCGR3B	-26462,-1102
chr8:96149990-96151451	chr8	+	96150009	96151457	True	NR_037484,NM_024613	chr8,chr8	-,+	MIR3150B,PLEKHF2	-64785,-4111
chr2:54373705-54374334	chr2	+	54373726	54374391	True	NM_001003937,NM_138448	chr2,chr2	-,+	TSPYL6,ACYP2	109077,-31374
chr12:47472823-47473267	chr12	+	47472883	47473229	True	NM_181847,NM_138371,NM_001143668	chr12,chr12,chr12	-,+,-	AMIGO2,FAM113B,AMIGO2	557,136822,557
chr5:115419952-115420609	chr5	+	115420029	115420567	True	NM_016144,NR_033363	chr5,chr5	+,-	COMMD10,ATG12	159,-242481
chr11:61595564-61595765	chr11	+	61595567	61595789	True	NM_013402,NM_004265	chr11,chr11	-,+	FADS1,FADS2	-11038,9
chr19:51818133-51819245	chr19	+	51818176	51819291	True	NM_001163922,NM_001101372	chr19,chr19	-,+	VSIG10L,IGLON5	26137,-3125
chr7:88469648-88469963	chr7	+	88469647	88470021	True	NM_152706,NM_181646	chr7,chr7	-,+	C7orf62,ZNF804B	-44616,-80951
chr4:139722807-139724762	chr4	+	139722880	139724801	True	NM_006874,NM_012118	chr4,chr4	-,+	ELF2,CCRN4L	280897,212141
chr16:756357-756628	chr16	+	756368	756600	True	NM_153350,NM_024042	chr16,chr16	-,+	FBXL16,METRN	-543,8572
chr6:132030356-132032262	chr7	+	143964562	143964639	False	NR_002158,NM_001005328,NM_198495	chr7,chr7,chr7	+,-,-	OR2A20P,OR2A7,CTAGE4	31826,-7841,1806
chr6:132030356-132032262	chr7	-	143882300	143882377	False	NM_001003702,NM_198495	chr7,chr7	-,+	ARHGEF35,CTAGE4	10464,-1806
chr6:132030356-132032262	chr6	+	132030376	132030916	True	NM_030908,NM_005021,NM_001145659	chr6,chr6,chr6	-,+,-	OR2A4,ENPP3,CTAGE9	-7835,-71985,1291
chr8:30056229-30057030	chr8	+	30056352	30056770	True	NM_006571,NM_001100916	chr8,chr8	+,-	DCTN6,MBOAT4	-42600,-54152
chr4:49267993-49269988	chr4	+	49269740	49269810	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-281535,-360925
chr4:69515292-69515641	chr4_ctg9_hap1	+	227920	228134	False	NM_014058,NM_001076	chr4_ctg9_hap1,chr4_ctg9_hap1	+,-	TMPRSS11E,UGT2B15	-84903,20879
chr4:69515292-69515641	chr4	+	69515331	69515545	True	NM_001075,NM_001076	chr4,chr4	+,-	UGT2B10,UGT2B15	166167,20881
chr12:40620879-40622666	chr12	+	40620878	40622713	True	NM_052885,NM_198578	chr12,chr12	-,+	SLC2A13,LRRK2	-121217,-2117
chr3:130279269-130280587	chr3	+	130279380	130280480	True	NM_001102608,NM_014602	chr3,chr3	+,-	COL6A6,PIK3R4	-260,185274
chr13:21514018-21514328	chr13	+	21514093	21514374	True	NM_022459,NM_005870	chr13,chr13	-,+	XPO4,SAP18	-37180,200278
chr9:35970097-35971309	chr9	+	35970218	35970904	True	NR_024283,NM_019897	chr9,chr9	+,-	LOC158376,OR2S2	-60790,-12067
chr20:33812326-33813984	chr20	+	33812462	33813833	True	NM_006690,NM_181468	chr20,chr20	+,-	MMP24,EIF6	705,58723
chr2:132919134-132919432	chr2	+	132919349	132919461	True	NM_001508,NR_027019	chr2,chr2	+,-	GPR39,ANKRD30BL	254685,114
chr6:34215579-34216281	chr6	+	34215652	34216270	True	NM_001008704,NM_145905,NM_178508,NM_001008703	chr6,chr6,chr6,chr6	-,+,-,-	C6orf1,HMGA1,C6orf1,C6orf1	684,-9135,684,684
chrX:134953643-134954191	chrX	+	134954087	134954167	True	NM_001007551,NM_018666,NM_001172288	chrX,chrX,chrX	-,+,-	CT45A5,SAGE1,CT45A5	-93,21617,-93
chrX:134953643-134954191	chrX	-	134883314	134883394	False	NM_001017436,NM_001017435	chrX,chrX	-,+	CT45A4,CT45A3	53391,93
chr19:7030561-7031858	chr19	+	7030603	7031577	True	NM_001164419,NM_001136507	chr19,chr19	-,+	MBD3L4,MBD3L5	8658,-60
chr19:7030561-7031858	chr19	-	7039199	7040174	False	NM_001164419,NM_144614,NM_001136507	chr19,chr19,chr19	-,+,+	MBD3L4,MBD3L2,MBD3L5	60,9176,-8657
chr19:7030561-7031858	chr19	-	7057660	7058635	False	NM_001164425,NM_144614	chr19,chr19	-,+	MBD3L3,MBD3L2	60,-8361
chr1:174978636-174979012	chr1	+	174978838	174979028	True	NM_014412,NM_022100	chr1,chr1	+,-	CACYBP,MRPS14	-9998,13613
chr2:181905897-181906232	chr2	+	181905993	181906178	True	NM_001030311,NM_006357	chr2,chr2	-,+	CERKL,UBE2E3	615713,-60706
chr3:183818370-183819018	chr3	+	183818393	183819067	True	NM_182589,NM_001023587	chr3,chr3	+,-	HTR3E,ABCC5	-477,-82666
chr15:81588290-81588913	chr15	+	81588297	81588879	True	NM_004513,NM_181900	chr15,chr15	+,-	IL16,STARD5	374,27695
chr22:42343583-42344709	chr22	+	42343933	42344631	True	NM_024053,NM_001002876,NR_024355,NM_001110215	chr22,chr22,chr22,chr22	-,-,+,-	CENPM,CENPM,LOC339674,CENPM	-785,-785,3559,-7710
chr17:53800552-53801886	chr17	+	53800607	53801854	True	NM_021213,NM_018286,NM_001099640	chr17,chr17,chr17	+,-,-	PCTP,TMEM100,TMEM100	26485,-382,7678
chr4:111436998-111438190	chr4	+	111437086	111438045	True	NM_000325,NM_001977	chr4,chr4	-,+	PITX2,ENPEP	106267,-39909
chr8:144491066-144491368	chr8	+	144491077	144491251	True	NM_201589,NM_052924	chr8,chr8	-,+	MAFA,RHPN1	21401,-40103
chr15:45541757-45543460	chr15	+	45542252	45543176	True	NM_138356,NM_004212	chr15,chr15	-,+	SHF,SLC28A2	-48879,1251
chr17:39139142-39139937	chr17	+	39139304	39139809	True	NM_033061,NM_182497	chr17,chr17	+,-	KRTAP4-7,KRT40	100649,3641
chr9:102822921-102823580	chr9	+	102822921	102823351	True	NM_015051,NM_014425	chr9,chr9	-,+	ERP44,INVS	38036,38159
chr15:83876895-83877107	chr15	+	83877093	83877155	True	NM_016073,NM_023003	chr15,chr15	-,+	HDGFRP3,TM6SF1	-772,-100820
chr7:2444799-2445375	chr7	+	2445107	2445389	True	NM_018641,NM_013321	chr7,chr7	+,-	CHST12,SNX8	-1900,-91008
chr22:24112395-24112782	chr22	+	24112583	24112689	True	NM_213720,NM_005940,NM_182520	chr22,chr22,chr22	-,+,+	CHCHD10,MMP11,C22orf15	-2442,2346,-7426
chr14:65380180-65381173	chr14	+	65380607	65381195	True	NM_001202559,NM_001202558,NM_002083,NM_001204063,NM_001204064,NM_145165	chr14,chr14,chr14,chr14,chr14,chr14	+,+,-,+,+,+	CHURC1-FNTB,CHURC1-FNTB,GPX2,CHURC1,CHURC1,CHURC1	-77,-77,28386,-77,-77,-77
chr2:237075518-237075780	chr2	+	237075561	237075695	True	NM_020311,NM_001485	chr2,chr2	+,-	CXCR7,GBX2	402684,1007
chr22:39021803-39022159	chr22	+	39021967	39022160	True	NM_001002880,NM_001013647	chr22,chr22	+,-	CBY1,LOC646851	30497,30527
chr11:66384877-66385491	chr11	+	66385054	66385518	True	NM_018219,NM_001198845,NM_006328,NM_001198846,NM_001198836,NM_001198837	chr11,chr11,chr11,chr11,chr11,chr11	-,+,+,+,+,+	CCDC87,RBM14-RBM4,RBM14,RBM14-RBM4,RBM14,RBM14	-24500,-1052,-1052,-1052,-1052,-1052
chr17:48228618-48229155	chr17	+	48228656	48229110	True	NM_032595,NM_000023	chr17,chr17	-,+	PPP1R9B,SGCA	-779,14255
chrX:127183922-127185280	chrX	+	127183984	127185221	True	NM_138289,NM_001122716	chrX,chrX	-,+	ACTRT1,CXorf64	1211,-1230301
chr7:97499360-97499816	chr7	+	97499435	97499833	True	NM_133436,NM_183356,NM_001178076,NM_001178077,NM_001178075,NM_001673,NM_013998	chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,-,+	ASNS,ASNS,ASNS,ASNS,ASNS,ASNS,TAC1	1695,2072,2072,1695,2072,2072,-138215
chr9:124062050-124062291	chr9	+	124062050	124062216	True	NM_004099,NM_000177	chr9,chr9	-,+	STOM,GSN	70379,-22
chr17:16319184-16319569	chr17	+	16319221	16319533	True	NM_016113,NM_181716	chr17,chr17	+,-	TRPV2,CENPV	-416,-62409
chr21:44531939-44532509	chr21	+	44532105	44532254	True	NM_006758,NM_001025203,NM_001025204,NM_000394	chr21,chr21,chr21,chr21	-,-,-,+	U2AF1,U2AF1,U2AF1,CRYAA	-4417,-4417,-4417,56886
chr1:232942523-232943497	chr1	+	232942643	232943501	True	NM_020808,NM_019090	chr1,chr1	-,+	SIPA1L2,KIAA1383	-291400,-2056
chr12:6450288-6450537	chr12	+	6450341	6450569	True	NM_001144857,NM_001065	chr12,chr12	+,-	PLEKHG6,TNFRSF1A	-28575,764
chr3:14267178-14268200	chr3	+	14267293	14268220	True	NR_027299,NM_014463	chr3,chr3	-,+	XPC,LSM3	-47121,-47116
chr2:169097847-169098482	chr2	+	169097869	169098459	True	NM_203463,NM_013233	chr2,chr2	+,-	LASS6,STK39	214375,5696
chr19:51585634-51585940	chr19	+	51585642	51585872	True	NM_022046,NM_014441	chr19,chr19	-,+	KLK14,SIGLEC9	1680,42264
chr1:173793124-173793698	chr1	+	173793225	173793741	True	NM_033319,NM_018122,NM_001127181,NM_001171182	chr1,chr1,chr1,chr1	-,+,-,-	CENPL,DARS2,CENPL,CENPL	86,55,86,45
chrX:77539988-77540584	chrX	+	77540198	77540623	True	NM_006639,NM_000291	chrX,chrX	-,+	CYSLTR1,PGK1	42516,-180584
chr12:20522675-20522948	chr12	+	20522841	20522947	True	NM_000921,NM_021094	chr12,chr12	+,-	PDE3A,SLCO1A2	-695,964935
chr22:32548418-32548688	chr22	+	32548425	32548645	True	NM_001010859,NR_033411	chr22,chr22	-,+	C22orf42,SLC5A1	6648,-93320
chr22:32548418-32548688	chr22	-	29804503	29804679	False	NM_145730,NM_021026	chr22,chr22	-,+	AP1B1,RFPL1	-19931,29892
chr22:32548418-32548688	chr22	+	32547350	32547570	False	NM_001010859,NR_033411	chr22,chr22	-,+	C22orf42,SLC5A1	7723,-92245
chr1:182759187-182759824	chr1	+	182759188	182759606	True	NM_033345,NM_001200052,NM_001200050,NM_001200051,NM_001200056,NM_030769	chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,+,+,+	RGS8,NPL,NPL,NPL,NPL,NPL	-117121,-655,-655,-655,-655,-655
chr2:97357659-97357880	chr2	+	97357668	97357916	True	NM_001142292,NM_001113382	chr2,chr2	-,+	LMAN2L,FER1L5	47947,-49145
chr6:168480927-168481216	chr6	+	168480995	168481231	True	NM_030615,NM_001122841,NM_024919	chr6,chr6,chr6	+,-,-	KIF25,FRMD1,FRMD1	-62493,-4463,-1156
chr1:44411671-44411951	chr1	+	44411794	44411990	True	NM_014652,NM_006934	chr1,chr1	+,-	IPO13,SLC6A9	487,71057
chr9:122121705-122123276	chr9	+	122121961	122123252	True	NR_027442,NM_014618	chr9,chr9	+,-	LOC100288842,DBC1	1432522,8537
chr11:44120099-44120642	chr11	+	44120271	44120505	True	NM_021926,NM_001178083,NM_207122,NM_000401	chr11,chr11,chr11,chr11	-,+,+,+	ALX4,EXT2,EXT2,EXT2	211261,-3223,-3223,-2575
chr5:137514624-137514915	chr5	+	137514631	137514959	True	NM_005733,NM_139199,NM_001164326,NM_006696	chr5,chr5,chr5,chr5	+,-,-,-	KIF20A,BRD8,BRD8,BRD8	-265,-273,-273,-273
chr8:145547840-145548446	chr8	+	145547901	145548433	True	NM_012079,NM_005526	chr8,chr8	-,+	DGAT1,HSF1	2184,-32682
chr19:19323451-19324626	chr19	+	19323515	19324399	True	NM_176880,NM_004386	chr19,chr19	-,+	NR2C2AP,NCAN	-9277,-784
chr1:40839934-40840191	chr1	+	40839957	40840181	True	NM_022733,NM_001198978,NM_001852	chr1,chr1,chr1	+,+,-	SMAP2,SMAP2,COL9A2	-630,123,-57018
chr5:132078284-132079497	chr5	+	132078470	132079123	True	NM_007054,NM_001039780	chr5,chr5	-,+	KIF3A,CCNI2	-5205,4013
chr3:11181056-11181776	chr3	+	11181247	11181811	True	NM_001098213,NR_027102	chr3,chr3	+,-	HRH1,LOC285370	-2519,-375370
chr15:93458794-93459362	chr15	+	93458819	93459402	True	NM_001166286,NR_036136	chr15,chr15	-,+	RGMA,MIR3175	157037,-11248
chr2:27347728-27349666	chr2	+	27348046	27349637	True	NM_032604,NM_001166240,NM_006569,NM_013388,NM_001166239	chr2,chr2,chr2,chr2,chr2	+,-,-,-,-	ABHD1,CGREF1,CGREF1,PREB,CGREF1	-1443,-6051,-6051,7955,-6273
chr22:45702759-45704118	chr22	+	45702758	45703962	True	NM_017911,NM_001009880,NM_001104595	chr22,chr22,chr22	+,-,+	FAM118A,KIAA0930,FAM118A	1822,-66108,1118
chr15:48462616-48464344	chr15	+	48462803	48464269	True	NM_001145668,NM_016132	chr15,chr15	+,-	CTXN2,MYEF2	19597,6346
chrY:20488009-20488404	chrY	+	20488014	20488396	True	NR_028083,NR_002161,NR_002160	chrY,chrY,chrY	-,+,+	FAM41AY1,NCRNA00230A,NCRNA00230B	78586,22,43
chrY:20488009-20488404	chrY	-	19691375	19691758	False	NR_028084,NR_002161,NR_002160	chrY,chrY,chrY	+,-,-	FAM41AY2,NCRNA00230A,NCRNA00230B	-78588,-22,-43
chr7:99747488-99747991	chr7	+	99747720	99748031	True	NM_018275,NM_001008395	chr7,chr7	-,+	C7orf43,C7orf59	8322,-1249
chr19:10612160-10612710	chr19	+	10612493	10612703	True	NM_203500,NM_012289,NM_032885	chr19,chr19,chr19	-,-,+	KEAP1,KEAP1,ATG4D	1401,828,41943
chr14:25043837-25044598	chr14	+	25043871	25044417	True	NM_015299,NM_001911	chr14,chr14	+,-	KHNYN,CTSG	-144784,1099
chr14:104386455-104387100	chr14	+	104386755	104387149	True	NM_001127393,NM_153046,NM_004894	chr14,chr14,chr14	-,+,-	C14orf2,TDRD9,C14orf2	804,7667,804
chrX:154452687-154453692	chrX	+	154452924	154453494	True	NM_003372,NM_171998	chrX,chrX	+,-	VBP1,RAB39B	-8281,40408
chr5:135170718-135170982	chr5	+	135170760	135170966	True	NM_145282,NM_000590	chr5,chr5	+,-	SLC25A48,IL9	-446,60600
chr19:45447638-45447915	chr19	+	45447841	45447957	True	NM_001646,NM_145288,NR_037932,NM_000483	chr19,chr19,chr19,chr19	+,-,+,+	APOC4,ZNF296,APOC4-APOC2,APOC2	-2397,131781,-2397,1281
chr17:33569394-33569707	chr17	+	33569401	33569709	True	NM_152462,NM_144975	chr17,chr17	-,+	AMAC1,SLFN5	-47989,376
chr11:57414717-57416198	chr11	+	57415172	57416190	True	NM_001142597,NR_029673,NM_145008,NM_006831	chr11,chr11,chr11,chr11	+,+,-,+	CLP1,MIR130A,YPEL4,CLP1	9025,-6558,1277,9025
chr8:72985001-72986150	chr8	+	72985135	72986127	True	NM_007332,NR_033651	chr8,chr8	-,+	TRPA1,LOC100132891	1749,-228848
chr6:33589830-33590060	chr6	+	33589868	33590094	True	NR_027908,NM_002224	chr6,chr6	-,+	C6orf227,ITPR3	-28753,-763
chr1:247615122-247615877	chr1	+	247615255	247615755	True	NM_183395,NM_001004492	chr1,chr1	+,-	NLRP3,OR2B11	-33956,29
chr12:14133450-14133755	chr12	+	14133450	14133678	True	NM_000834,NM_018179	chr12,chr12	-,+	GRIN2B,ATF7IP	-428,384932
chrX:129473308-129473541	chrX	+	129473359	129473515	True	NM_022810,NM_003951,NM_178471	chrX,chrX,chrX	+,+,-	SLC25A14,SLC25A14,GPR119	531,531,46046
chr9:138414217-138414583	chr9	+	138414252	138414580	True	NM_144654,NM_002297	chr9,chr9	-,+	C9orf116,LCN1	-22491,-1017
chr14:20937105-20937373	chr14	+	20937203	20937365	True	NM_144568,NM_000270,NM_001100814	chr14,chr14,chr14	-,+,-	TMEM55B,PNP,TMEM55B	-7566,172,-7566
chr22:39006071-39006787	chr22	+	39006339	39006793	True	NM_001002880,NM_007068	chr22,chr22	+,-	CBY1,DMC1	45864,-40150
chr6:14839732-14840648	chr6	+	14839917	14840586	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	405940,822760
chr10:99396234-99398009	chr10	+	99396437	99397509	True	NM_018425,NM_178832,NM_001098831	chr10,chr10,chr10	+,-,-	PI4K2A,MORN4,MORN4	2933,-3093,-2524
chr11:61938743-61939610	chr11	+	61938809	61939585	True	NM_006552,NM_206998	chr11,chr11	+,-	SCGB1D1,SCGB1D4	18124,127003
chr6:44374572-44376132	chr6	+	44374801	44376188	True	NM_001253,NM_020745	chr6,chr6	+,-	CDC5L,AARS2	-19555,-93738
chr4:71581753-71583367	chr4	+	71582180	71583233	True	NM_144646,NM_014961,NM_001037442	chr4,chr4,chr4	-,+,+	IGJ,RUFY3,RUFY3	-49832,4462,4462
chr1:145075925-145076219	chr1	+	145076020	145076192	True	NM_004892,NM_022359	chr1,chr1	+,-	SEC22B,PDE4DIP	20214,50
chrX:53350893-53351270	chrX	+	53351042	53351232	True	NM_001111125,NM_144968	chrX,chrX	-,+	IQSEC2,RIBC1	-520,98606
chr7:39989669-39989909	chr7	+	39989709	39989883	True	NM_031267,NM_138701,NM_003718	chr7,chr7,chr7	+,-,+	CDK13,C7orf11,CDK13	75,184418,75
chr7:73082702-73082950	chr7	+	73082879	73082967	True	NM_001077621,NM_032317	chr7,chr7	+,-	VPS37D,DNAJC30	-756,14864
chr17:2698465-2699503	chr17	+	2698683	2699307	True	NM_001100398,NM_015085,NR_031654	chr17,chr17,chr17	+,+,-	RAP1GAP2,RAP1GAP2,MIR1253	424,424,-47207
chrX:153522810-153523303	chrX	+	153523171	153523312	True	NM_001205201,NM_001145933,NM_012253,NM_001586	chrX,chrX,chrX,chrX	-,+,+,-	TEX28,TKTL1,TKTL1,TEX28	303,714,714,193
chr3:189841200-189842116	chr3	+	189841382	189842046	True	NM_001134418,NM_006580,NM_018192	chr3,chr3,chr3	-,+,-	LEPREL1,CLDN16,LEPREL1	-1156,263614,-2474
chr2:198650256-198650705	chr2	+	198650323	198650735	True	NM_033030,NM_006226,NM_197970	chr2,chr2,chr2	-,+,-	BOLL,PLCL1,BOLL	-249,18690,253
chr1:59096052-59096469	chr1	+	59096058	59096509	True	NM_002353,NR_034014	chr1,chr1	-,+	TACSTD2,LOC100131060	-52892,154313
chr19:49522215-49522772	chr19	+	49522462	49522736	True	NM_000894,NM_000737,NM_033378	chr19,chr19,chr19	-,-,+	LHB,CGB,CGB2	-2115,4907,12393
chr1:119683216-119683814	chr1	+	119683219	119683659	True	NM_001005783,NM_201263,NM_015836	chr1,chr1,chr1	+,-,-	HAO2,WARS2,WARS2	227742,6,6
chr2:177016748-177017077	chr2	+	177016768	177016968	True	NR_033979,NM_014621,NR_029609	chr2,chr2,chr2	-,+,+	LOC401022,HOXD4,MIR10B	36768,-706,-1788
chr7:129595303-129596113	chr7	+	129595303	129596120	True	NM_182697,NM_001202498,NM_003344,NM_014997	chr7,chr7,chr7,chr7	-,-,-,+	UBE2H,UBE2H,UBE2H,KLHDC10	-2503,-2520,-2503,114228
chr2:201730592-201731019	chr2	+	201730611	201730898	True	NR_027856,NM_001162407,NR_027855,NM_001136039,NM_004071	chr2,chr2,chr2,chr2,chr2	-,-,-,+,-	CLK1,CLK1,CLK1,NIF3L1,CLK1	-1144,-1327,-1144,23151,-1144
chr10:69278681-69280253	chr10	+	69278689	69280289	True	NM_001127384,NM_012238	chr10,chr10	-,+	CTNNA3,SIRT1	145177,364137
chr6:89788248-89789648	chr6	+	89788495	89789617	True	NM_006813,NM_080743	chr6,chr6	+,-	PNRC1,SRSF12	811,38241
chr20:12320489-12321656	chr20	+	12320646	12321427	True	NM_017714,NM_014962	chr20,chr20	-,+	TASP1,BTBD3	1298206,-422146
chr16:84179109-84179417	chr16	+	84179314	84179408	True	NM_031463,NM_001146051,NM_178452	chr16,chr16,chr16	-,-,+	HSDL1,HSDL1,LRRC50	-514,-514,-503
chr9:65604192-65604872	chr9	+	65604199	65604894	True	NR_024496,NM_015667	chr9,chr9	+,-	LOC442421,FAM75A7	889374,-94589
chr9:65604192-65604872	chr9	+	43862595	43863290	False	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	-231865,-177761
chr9:65604192-65604872	chr9	-	39130844	39131539	False	NM_033655,NM_001085452	chr9,chr9	-,+	CNTNAP3,FAM75A1	156811,224159
chr2:24579502-24580874	chr2	+	24580584	24580757	True	NM_001040710,NM_006277,NM_019595,NM_147152	chr2,chr2,chr2,chr2	+,-,-,-	C2orf84,ITSN2,ITSN2,ITSN2	-182669,2699,2699,2699
chr18:61553556-61554347	chr18	+	61553920	61554398	True	NM_002575,NM_001143818,NM_006919	chr18,chr18,chr18	+,+,-	SERPINB2,SERPINB2,SERPINB3	540,540,-224723
chr6:15025876-15026600	chr6	+	15025875	15026497	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	220029,636848
chr16:2066631-2067260	chr16	+	2066701	2067207	True	NM_001130012,NM_178167,NM_001099456,NM_004785	chr16,chr16,chr16,chr16	+,-,+,+	SLC9A3R2,ZNF598,NPW,SLC9A3R2	9680,-6938,2313,9680
chr15:22544820-22545043	chr15	+	22544905	22545083	True	NR_027407,NR_033735	chr15,chr15	-,+	GOLGA8DP,REREP3	170695,1481
chr7:1544396-1545224	chr7	+	1544439	1544880	True	NM_002360,NM_001080453	chr7,chr7	+,-	MAFK,INTS1	25487,-421
chr15:66642390-66642989	chr15	+	66642567	66643007	True	NM_017858,NR_004388,NM_002755	chr15,chr15,chr15	-,-,+	TIPIN,SCARNA14,MAP2K1	6099,-2887,36203
chr10:15395664-15396417	chr10	+	15395741	15396137	True	NM_183005,NM_001010924	chr10,chr10	+,-	RPP38,FAM171A1	-256610,16971
chrX:2671910-2673038	chrY	+	2621996	2622500	False	NR_003254,NM_003140	chrY,chrY	+,-	XGPY2,SRY	-1710,33342
chrX:2671910-2673038	chrX	+	2671996	2672500	True	NM_001141919,NM_001141920,NR_003254,NR_037842,NM_175569	chrX,chrX,chrX,chrX,chrX	+,+,+,-,+	XG,XG,XGPY2,NCRNA00102,XG	-1954,-1954,-1710,-138608,-1954
chr14:78268206-78268916	chr14	+	78268291	78268963	True	NM_020421,NM_012245,NM_001142545	chr14,chr14,chr14	+,-,+	ADCK1,SNW1,ADCK1	-1922,-40794,-1922
chr16:29939274-29940277	chr16	+	29939420	29939798	True	NM_178863,NM_181718	chr16,chr16	-,+	KCTD13,ASPHD1	-1875,-27324
chr1:6638575-6639706	chr1	+	6638592	6639586	True	NM_014851,NM_024654,NM_005341	chr1,chr1,chr1	-,-,+	KLHL21,NOL9,ZBTB48	23393,-23934,476
chr12:24737403-24737777	chr12	+	24737456	24737816	True	NR_030625,NR_029451	chr12,chr12	+,-	MIR920,C12orf67	-372152,-354
chr11:31517700-31519290	chr11	+	31517867	31518995	True	NM_144981,NM_019040	chr11,chr11	-,+	IMMP1L,ELP4	12229,12301
chr17:43679190-43679463	chr17_ctg5_hap1	+	545439	545680	False	NM_001193465,NR_034172	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	KIAA1267,LOC644246	17817,49757
chr17:43679190-43679463	chr17_ctg5_hap1	-	1188742	1188983	False	NR_026901,NR_037772	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LOC644172,CRHR1	-355,-18289
chr17:43679190-43679463	chr17_ctg5_hap1	-	1408302	1408543	False	NR_002940,NM_016632	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LRRC37A4,ARL17A	72833,105391
chr17:43679190-43679463	chr17	+	43679189	43679444	True	NR_026901,NR_037772	chr17,chr17	-,+	LOC644172,CRHR1	355,18265
chr17:43679190-43679463	chr17	-	44321224	44321301	False	NM_001193465,NR_034172	chr17,chr17	-,+	KIAA1267,LOC644246	-18484,-50337
chr19:2150774-2151102	chr19	+	2150781	2151031	True	NM_001077523,NM_003938,NM_032482	chr19,chr19,chr19	-,-,+	AP3D1,AP3D1,DOT1L	575,575,13116
chr5:150631392-150632213	chr5	+	150631397	150632226	True	NM_000405,NM_015621,NM_001167607	chr5,chr5,chr5	+,-,+	GM2A,CCDC69,GM2A	386,-27743,386
chr16:77751324-77752667	chr16	+	77751681	77752661	True	NR_024154,NM_001105663,NM_199355	chr16,chr16,chr16	+,+,-	NUDT7,NUDT7,ADAMTS18	3749,3749,-282670
chr21:27544833-27545381	chr21	+	27545127	27545293	True	NM_201413,NM_000484,NM_001204302,NM_201414,NM_001204301,NM_001136129,NM_002040,NM_001136131,NM_001136130,NM_001204303	chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21	-,-,-,-,-,-,+,-,-,-	APP,APP,APP,APP,APP,APP,GABPA,APP,APP,APP	-1989,-1989,-1989,-1989,-1989,-1989,-437854,-1681,-1989,-1989
chr13:84455344-84456256	chr13	+	84455378	84456099	True	NM_015567,NM_052910	chr13,chr13	+,-	SLITRK5,SLITRK1	3868770,479
chr10:106015064-106015304	chr10	+	106015124	106015332	True	NM_004832,NM_001191002,NM_001191003,NM_025145	chr10,chr10,chr10,chr10	+,+,+,-	GSTO1,GSTO1,GSTO1,WDR96	-707,-707,-1223,-23004
chr6:52429180-52430224	chr6	+	52429363	52430243	True	NM_012288,NR_024403	chr6,chr6	-,+	TRAM2,LOC730101	11669,98955
chr17:38333501-38333825	chr17	+	38333531	38333613	True	NM_016339,NM_021724	chr17,chr17	+,-	RAPGEFL1,NR1D1	628,-76558
chr2:202221619-202223230	chr2	+	202221689	202222777	True	NM_139163,NM_001127391,NM_018571	chr2,chr2,chr2	-,-,+	ALS2CR12,ALS2CR12,STRADB	-6,-6,93614
chr3:9291390-9292023	chr3	+	9291389	9291980	True	NM_001114092,NM_014850,NM_001033117	chr3,chr3,chr3	+,-,-	THUMPD3,SRGAP3,SRGAP3	112736,-78,-78
chr12:133006914-133007184	chr12	+	133006935	133007183	True	NM_001142641,NM_001122636	chr12,chr12	+,-	FBRSL1,GALNT9	59973,-101030
chr17:18946864-18947557	chr17	+	18946967	18947592	True	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	83189,2794
chr17:18946864-18947557	chr17	-	19033579	19034204	False	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	-2848,-83243
chr12:47474934-47475226	chr12	+	47474951	47475265	True	NM_181847,NM_138371,NM_001143668	chr12,chr12,chr12	-,+,-	AMIGO2,FAM113B,AMIGO2	-1217,134786,-1217
chr5:37839137-37839341	chr5	+	37839148	37839300	True	NM_152403,NM_000514,NM_001190469,NM_001190468,NM_199231	chr5,chr5,chr5,chr5,chr5	+,-,-,-,-	EGFLAM,GDNF,GDNF,GDNF,GDNF	419232,532,-3219,-3219,-3555
chr1:16538060-16538745	chr1	+	16538221	16538737	True	NM_153213,NM_001114600	chr1,chr1	-,+	ARHGEF19,C1orf144	417,154845
chr15:89921834-89922037	chr15	+	89921883	89921977	True	NR_015411,NM_002693	chr15,chr15	+,-	LOC254559,POLG	-661,-43857
chr9:139737576-139738099	chr9	+	139737677	139738117	True	NM_003792,NM_206920,NM_014172,NM_001080482,NM_001135861	chr9,chr9,chr9,chr9,chr9	-,+,+,+,+	EDF1,MAMDC4,PHPT1,C9orf172,PHPT1	22671,8701,5138,749,5138
chr22:39238152-39238358	chr22	+	39238191	39238401	True	NM_014293,NM_145699	chr22,chr22	-,+	NPTXR,APOBEC3A	1666,115125
chr6:17707328-17708732	chr6	+	17707438	17708094	True	NM_005124,NM_016255	chr6,chr6	-,+	NUP153,FAM8A1	-620,-106971
chr16:23728162-23729504	chr16	+	23728306	23729464	True	NM_022097,NM_033266	chr16,chr16	+,-	CHP2,ERN2	36483,-3485
chr6:44193097-44194293	chr6	+	44193295	44194315	True	NM_004955,NM_178148,NM_001078174,NM_001078175,NM_001078176,NM_001078177	chr6,chr6,chr6,chr6,chr6,chr6	+,-,+,+,+,+	SLC29A1,SLC35B2,SLC29A1,SLC29A1,SLC29A1,SLC29A1	-6114,31019,-6114,-2060,-2060,-1993
chr3:186915477-186915973	chr3	+	186915510	186916007	True	NM_052969,NM_153708	chr3,chr3	-,+	RPL39L,RTP1	-58247,-287
chr9:35592264-35592859	chr9	+	35592376	35592882	True	NM_001782,NM_006285	chr9,chr9	-,+	CD72,TESK1	25592,12398
chr11:130185801-130186896	chr11	+	130185873	130186795	True	NM_014155,NM_139055	chr11,chr11	-,+	ZBTB44,ADAMTS15	-1266,132073
chr21:46066804-46067182	chr21	+	46066810	46067048	True	NM_198698,NM_181688,NM_198692	chr21,chr21,chr21	-,+,+	KRTAP12-4,KRTAP10-10,KRTAP10-11	7578,-9588,-530
chr19:3521590-3522120	chr19	+	3521790	3522147	True	NM_001136197,NM_001145165,NM_001136198	chr19,chr19,chr19	+,-,+	FZR1,DOHH,FZR1	806,-20852,806
chrX:26211245-26212994	chrX	+	26211247	26212875	True	NM_139058,NM_173523	chrX,chrX	-,+	ARX,MAGEB6	-1177182,-741
chr19:9215805-9217627	chr19	+	9215993	9216813	True	NM_001005192,NM_001005193,NM_001004456	chr19,chr19,chr19	-,-,+	OR7G1,OR7G2,OR1M1	9677,-2011,-12133
chr19:52430924-52431193	chr19	+	52430956	52431098	True	NM_024840,NM_001031721,NM_023074	chr19,chr19,chr19	+,+,-	ZNF613,ZNF613,ZNF649	-319,-319,-22651
chrX:113818462-113818903	chrX	+	113818599	113818903	True	NM_000868,NM_000640	chrX,chrX	+,-	HTR2C,IL13RA2	-99,433354
chr19:36348307-36348754	chr19	+	36348382	36348610	True	NM_199180,NM_004646,NM_032123,NM_199179	chr19,chr19,chr19,chr19	+,-,+,+	KIRREL2,NPHS1,KIRREL2,KIRREL2	-623,-5487,-623,-623
chr22:35881169-35882091	chr22	+	35881257	35881653	True	NM_005368,NM_014310	chr22,chr22	-,+	MB,RASD2	131781,55698
chr19:49828945-49829281	chr19	+	49828944	49829152	True	NM_001040031,NM_014037,NM_001774	chr19,chr19,chr19	+,-,+	CD37,SLC6A16,CD37	9524,-470,9524
chr11:6341280-6341660	chr11	+	6341302	6341530	True	NM_176875,NM_145040	chr11,chr11	+,-	CCKBR,PRKCDBP	-60387,260
chr3:168864824-168865149	chr3	+	168864855	168865182	True	NM_001163999,NR_030294,NM_001164000,NM_005241,NM_001105078,NM_001105077	chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-	MECOM,MIR551B,MECOM,MECOM,MECOM,MECOM	-762,-595264,390,-762,-455,-762
chr19:42344847-42345247	chr19	+	42345051	42345251	True	NM_173506,NM_001040283	chr19,chr19	-,+	LYPD4,DMRTC2	3307,3834
chr16:2509124-2509829	chr16	+	2509191	2509831	True	NM_001048212,NM_025108	chr16,chr16	-,+	CEMP1,C16orf59	71628,283
chr19:46369607-46370270	chr19	+	46369678	46370184	True	NM_004819,NM_004497	chr19,chr19	-,+	SYMPK,FOXA3	-3130,-2211
chr16:31483841-31484100	chr16	+	31483841	31484099	True	NM_015927,NM_001164719,NM_001042454,NM_001136509	chr16,chr16,chr16,chr16	+,+,+,-	TGFB1I1,TGFB1I1,TGFB1I1,ZNF843	426,-363,-416,-29493
chr13:88325323-88325878	chr13	+	88325367	88325906	True	NM_015567,NR_033829	chr13,chr13	+,-	SLITRK5,LOC642345	-548,-2149
chr16:76269347-76270790	chr16	+	76269387	76270726	True	NM_005548,NM_033401	chr16,chr16	-,+	KARS,CNTNAP4	-587802,40449
chr16:3087873-3088227	chr16	+	3087878	3088084	True	NM_001103175,NM_022468	chr16,chr16	-,+	CCDC64B,MMP25	-2336,8597
chr22:31006549-31006921	chr22	+	31006579	31006929	True	NR_036550,NM_000355,NM_001184726	chr22,chr22,chr22	-,+,+	PES1,TCN2,TCN2	-3579,-3560,-3560
chr6:154833154-154834000	chr6	+	154833195	154834021	True	NM_173515,NM_014892	chr6,chr6	-,+	CNKSR3,SCAF8	-1442,220490
chr3:184973561-184974200	chr3	+	184973780	184974042	True	NM_001966,NM_004721,NM_001166415	chr3,chr3,chr3	-,+,-	EHHADH,MAP3K13,EHHADH	-1894,106927,-1894
chr1:17310083-17311390	chr1	+	17310269	17311214	True	NM_014675,NM_002403,NM_001135248,NM_001135247,NM_017459	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	CROCC,MFAP2,MFAP2,MFAP2,MFAP2	-61875,-3096,-3096,-2188,-2188
chr16:87969053-87969498	chr16	+	87969057	87969203	True	NM_001173539,NM_001739	chr16,chr16	+,-	BANP,CA5A	15834,959
chr14:59098778-59099975	chr14	+	59098868	59099624	True	NM_016651,NM_012460,NM_001079520	chr14,chr14,chr14	+,-,+	DACT1,TIMM9,DACT1	5132,-204636,5132
chr12:83543442-83545281	chr12	+	83543585	83545323	True	NM_152588,NR_033192	chr12,chr12	+,-	TMTC2,CCDC59	-462702,-791001
chr11:66062136-66062692	chr11	+	66062176	66062670	True	NM_020470,NM_153266	chr11,chr11	-,+	YIF1A,TMEM151A	-5538,-2854
chr1:21114275-21115464	chr1	+	21114320	21114986	True	NM_016287,NM_032409	chr1,chr1	-,+	HP1BP3,PINK1	-1139,-154430
chr1:115238211-115238455	chr1	+	115238239	115238501	True	NM_000036,NM_003176,NM_001172626	chr1,chr1,chr1	-,+,-	AMPD1,SYCP1,AMPD1	0,158953,0
chr3:38833620-38835231	chr3	+	38833723	38835260	True	NM_020839,NM_006514	chr3,chr3	+,-	WDR48,SCN10A	258246,291
chr1:74702216-74703578	chr1	+	74702248	74703609	True	NM_015978,NM_001105659	chr1,chr1	+,-	TNNI3K,LRRIQ3	-1236,-38377
chr3:128902975-128903250	chr3	+	128902987	128903243	True	NM_001127195,NM_001127194,NM_001127196,NM_001127193,NM_001127192,NM_016128,NM_003418	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,-,+,-	CNBP,CNBP,CNBP,CNBP,CNBP,COPG,CNBP	-177,-177,-177,-177,-177,65209,-177
chr2:210318846-210319218	chr2	+	210318897	210319056	True	NM_152519,NM_001039538	chr2,chr2	-,+	C2orf67,MAP2	717058,-30186
chr6:147533080-147534480	chr6	+	147533116	147534332	True	NM_139244,NR_034115,NM_001127715	chr6,chr6,chr6	+,-,+	STXBP5,LOC729178,STXBP5	-7661,-7366,-7661
chr5:179103931-179104332	chr5	+	179104037	179104320	True	NM_001024649,NM_001164444	chr5,chr5	+,-	CANX,CBY3	21609,3706
chr13:114311693-114311921	chr13	+	114311692	114311872	True	NM_000705,NM_002929	chr13,chr13	-,+	ATP4B,GRK1	691,9724
chr2:34268439-34269308	chr2	+	34268457	34269213	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-529573,-315173
chr7:141404196-141404947	chr7	+	141404288	141404978	True	NM_001080392,NM_001105558	chr7,chr7	-,+	KIAA1147,WEE2	-2335,3174
chr19:20017408-20019371	chr19	+	20017734	20019347	True	NM_001145404,NM_031218	chr19,chr19	-,+	ZNF506,ZNF93	-85174,-6073
chr16:69142167-69142408	chr16	+	69142182	69142424	True	NM_138612,NM_001199280,NM_005329,NM_001040146	chr16,chr16,chr16,chr16	+,+,+,-	HAS3,HAS3,HAS3,CHTF8	-2111,-2773,-797,23688
chr18:73126390-73126690	chr18	+	73126390	73126726	True	NM_005786,NM_001037331	chr18,chr18	+,-	TSHZ1,C18orf62	-203710,12913
chr4:25536415-25537523	chr4	+	25536415	25537411	True	NM_015187,NM_001177998	chr4,chr4	-,+	SEL1L3,SLC34A2	327249,120023
chr6:73939222-73940255	chr6	+	73939657	73940306	True	NM_001126063,NM_001017361	chr6,chr6	-,+	KHDC1L,C6orf221	-4482,132093
chr11:76092745-76093397	chr11	+	76092765	76093303	True	NM_020193,NM_004705	chr11,chr11	+,-	C11orf30,PRKRIR	62765,-885
chr10:104190467-104191194	chr10	+	104190565	104191243	True	NM_024040,NR_030169	chr10,chr10	-,+	CUEDC2,MIR146B	1230,5025
chr6:107434614-107434838	chr6	+	107434663	107434853	True	NM_001080450,NM_016487	chr6,chr6	-,+	BEND3,C6orf203	833,-85308
chr19:36139423-36139712	chr19	+	36139429	36139629	True	NM_000704,NM_001863,NM_014209	chr19,chr19,chr19	-,+,+	ATP4A,COX6B1,ETV2	-84869,-356,-6834
chr20:60716131-60716410	chr20	+	60716331	60716451	True	NM_198935,NM_002792	chr20,chr20	+,-	SS18L1,PSMA7	2370,2073
chr1:162526654-162527476	chr1	+	162526784	162527470	True	NM_053282,NM_003115	chr1,chr1	-,+	SH2D1B,UAP1	-144856,3825
chr9:123885207-123885627	chr9	+	123885207	123885503	True	NM_007018,NM_001735	chr9,chr9	+,-	CEP110,C5	-34684,-72653
chr16:67233746-67233971	chr16	+	67233793	67233893	True	NM_178516,NM_001950,NM_024712,NR_029887	chr16,chr16,chr16,chr16	-,+,+,-	EXOC3L1,E2F4,ELMO3,MIR328	-9686,-7776,-816,2455
chr11:122078184-122078685	chr11	+	122078209	122078673	True	NM_032873,NR_024430	chr11,chr11	+,-	UBASH3B,MIR100HG	447724,-4439
chr3:72937626-72939147	chr3	+	72937906	72938966	True	NM_001080393,NM_018130	chr3,chr3	+,-	GXYLT2,SHQ1	-579,-40308
chr17:40120030-40120350	chr17	+	40120085	40120347	True	NM_033133,NM_198830	chr17,chr17	+,-	CNP,ACLY	-1377,-44813
chr19:36203510-36204904	chr19	+	36203576	36204880	True	NM_014727,NM_024660,NM_014383	chr19,chr19,chr19	+,-,+	MLL4,IGFLR1,ZBTB32	4040,28521,-85
chr16:23462234-23463969	chr16	+	23462536	23463982	True	NM_019116,NM_153603	chr16,chr16	+,-	UBFD1,COG7	104879,580
chr16:30759759-30759983	chr16	+	30759832	30759898	True	NM_001172432,NM_000294,NM_001014979	chr16,chr16,chr16	+,+,-	PHKG2,PHKG2,C16orf93	-263,-263,13717
chr12:88175791-88176078	chr12	+	88175834	88175908	True	NM_001009894,NR_033410	chr12,chr12	+,-	C12orf29,MKRN9P	253359,2644
chr19:54851732-54852567	chr19	+	54851909	54852502	True	NM_012276,NM_001005367	chr19,chr19	-,+	LILRA4,TTYH1	-1488,74102
chr19:47250109-47250544	chr19	+	47250209	47250593	True	NM_013403,NM_001039877,NM_001039885,NM_024301	chr19,chr19,chr19,chr19	-,-,+,+	STRN4,STRN4,FKRP,FKRP	-489,-489,-957,-957
chr19:12832523-12832754	chr19	+	12832572	12832680	True	NM_001136196,NM_001136195,NM_004317,NM_013433	chr19,chr19,chr19,chr19	-,-,+,-	TNPO2,TNPO2,ASNA1,TNPO2	832,2180,15625,475
chr8:17402997-17404010	chr8	+	17403229	17404038	True	NM_001164771,NM_003046,NM_004686	chr8,chr8,chr8	+,+,-	SLC7A2,SLC7A2,MTMR7	-6996,-6996,-132189
chr3:169584195-169585136	chr3	+	169584248	169584948	True	NM_001080460,NM_182610,NM_024727	chr3,chr3,chr3	+,+,-	LRRIQ4,SAMD7,LRRC31	-44601,44533,2762
chr20:42983081-42984097	chr20	+	42983234	42984055	True	NM_001080472,NM_001030003,NM_001030004,NM_175914	chr20,chr20,chr20,chr20	-,+,+,+	FITM2,HNF4A,HNF4A,HNF4A	-43345,385,385,385
chr3:147127202-147127564	chr3	+	147127227	147127531	True	NM_001168378,NM_001168379,NM_003412,NM_032153	chr3,chr3,chr3,chr3	-,-,+,-	ZIC4,ZIC4,ZIC1,ZIC4	-5156,-3920,-102,-2820
chr1:100714706-100715240	chr1	+	100714784	100715256	True	NM_001130841,NM_001918	chr1,chr1	+,-	RTCD1,DBT	16457,203
chr2:162356716-162357866	chr2	+	162356762	162357906	True	NM_006593,NM_001935	chr2,chr2	+,-	TBR1,DPP4	-84201,573196
chr2:162356716-162357866	chr1	+	247003474	247003990	False	NR_015422,NM_015446	chr1,chr1	+,-	LOC149134,AHCTF1	-50614,90794
chr5:175106198-175108069	chr5	+	175106579	175108095	True	NM_022304,NM_000794	chr5,chr5	+,-	HRH2,DRD1	368,-235416
chr10:65025104-65027070	chr10	+	65025104	65026710	True	NM_004241,NM_030759	chr10,chr10	-,+	JMJD1C,NRBF2	2327,-132154
chr18:46986969-46987548	chr18	+	46987114	46987570	True	NM_017653,NR_031720	chr18,chr18	-,+	DYM,MIR1539	-35,26172
chr1:87800379-87800834	chr1	+	87800497	87800675	True	NM_006769,NM_203341	chr1,chr1	+,-	LMO4,SEP15	-6397,-420390
chr1:241524133-241525493	chr1	+	241524137	241525516	True	NM_002924,NM_003679	chr1,chr1	-,+	RGS7,KMO	-3659,170163
chr7:49815745-49816334	chr7	+	49815904	49816372	True	NM_001159878,NM_198570	chr7,chr7	-,+	ZPBP,VWC2	316538,-2698
chr7:131379396-131380675	chr7	+	131379726	131380414	True	NM_005397,NM_013255	chr7,chr7	-,+	PODXL,MKLN1	-138350,-367182
chr14:93670499-93671903	chr14	+	93670630	93671733	True	NM_001100417,NM_175748,NM_032490	chr14,chr14,chr14	+,+,-	UBR7,UBR7,C14orf142	1667,1667,1777
chr2:202338906-202339395	chr2	+	202339067	202339403	True	NM_015049,NM_018571	chr2,chr2	-,+	TRAK2,STRADB	-22748,-22731
chr20:46988475-46988705	chr20	+	46988521	46988699	True	NR_026958,NM_020820	chr20,chr20	+,-	LOC284749,PREX1	24,455771
chr17:79794112-79794548	chr17	+	79794324	79794530	True	NM_001007533,NM_000160,NM_001093767,NM_207368	chr17,chr17,chr17,chr17	-,+,-,-	DYSFIP1,GCGR,FAM195B,FAM195B	-1398,-32370,-3157,-3157
chr17:40172273-40173947	chr17	+	40172432	40173887	True	NM_003315,NM_001144766,NR_029431,NM_001144929,NM_001144928,NM_017595,NM_001144927,NM_001001349	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,+,+,+,+,+	DNAJC7,DNAJC7,DNAJC7,NKIRAS2,NKIRAS2,NKIRAS2,NKIRAS2,NKIRAS2	-2717,-3249,-2717,-396,-396,-396,-396,-2889
chr1:203313258-203314993	chr1	+	203313473	203314748	True	NM_002023,NM_006763	chr1,chr1	-,+	FMOD,BTG2	5592,-38860
chr11:111126788-111127281	chr11	+	111126869	111127185	True	NM_198498,NR_034154	chr11,chr11	+,-	C11orf53,C11orf92	-213,43416
chr11:70243044-70244228	chr11	+	70243377	70244211	True	NM_133266,NM_138565,NM_005231,NM_001184740	chr11,chr11,chr11,chr11	-,+,+,+	SHANK2,CTTN,CTTN,CTTN	263762,400,400,400
chr3:195348423-195348885	chr3	+	195348515	195348831	True	NM_001647,NR_003265	chr3,chr3	-,+	APOD,SDHAP2	-37439,36078
chr3:195348423-195348885	chr3	+	195476801	195476852	False	NM_001098516,NM_004532	chr3,chr3	+,-	MUC20,MUC4	-25755,62347
chr4:75859918-75860139	chr4	+	75859946	75860177	True	NM_001729,NM_015393	chr4,chr4	-,+	BTC,PARM1	-140064,-1714
chr12:6449988-6450288	chr12	+	6449987	6450271	True	NM_001144857,NM_001065	chr12,chr12	+,-	PLEKHG6,TNFRSF1A	-28221,1062
chr7:91762874-91763101	chr7	+	91762884	91763146	True	NM_000786,NM_001146152,NM_019004	chr7,chr7,chr7	-,-,+	CYP51A1,CYP51A1,ANKIB1	744,963,112401
chr20:36887693-36888532	chr20	+	36887704	36888572	True	NM_001029864,NM_001725	chr20,chr20	-,+	KIAA1755,BPI	652,43979
chr12:57869594-57869931	chr12	+	57869606	57869960	True	NM_032496,NM_004990,NM_001080157,NM_001080156	chr12,chr12,chr12,chr12	-,+,-,-	ARHGAP9,MARS,ARHGAP9,ARHGAP9	3723,11775,3514,1818
chr3:99537976-99539334	chr3	+	99538044	99539029	True	NM_014890,NM_032359	chr3,chr3	-,+	FILIP1L,C3orf26	56069,-1423
chr8:75257149-75258153	chr8	+	75257407	75258181	True	NM_018972,NM_001040875,NM_020647	chr8,chr8,chr8	+,+,-	GDAP1,GDAP1,JPH1	4436,4471,-23845
chr12:52914050-52914295	chr12	+	52914054	52914266	True	NM_002284,NM_000424	chr12,chr12	+,-	KRT86,KRT5	-218456,27
chr17:79341149-79341777	chr17	+	79341287	79341395	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	32144,-36813
chr4:41982121-41982673	chr4	+	41982265	41982507	True	NM_001159547,NM_001029955	chr4,chr4	-,+	BEND4,DCAF4L1	172438,1205
chr1:204338459-204338801	chr1	+	204338486	204338782	True	NM_001204171,NR_027022,NM_014935	chr1,chr1,chr1	+,-,-	MDM4,LOC127841,PLEKHA6	146724,115,-9442
chr20:50158055-50158289	chr20	+	50158172	50158329	True	NM_173091,NM_014484,NM_012340	chr20,chr20,chr20	-,+,-	NFATC2,MOCS3,NFATC2	979,-582861,979
chr1:184383226-184383469	chr1	+	184383225	184383310	True	NM_025191,NM_030806	chr1,chr1	-,+	EDEM3,C1orf21	340790,-27132
chr12:76426477-76426866	chr12	+	76426582	76426910	True	NM_007350,NM_006851	chr12,chr12	-,+	PHLDA1,GLIPR1	-1026,-552120
chr9:28661439-28662750	chr9	+	28661831	28662564	True	NM_152570,NM_020124	chr9,chr9	-,+	LINGO2,IFNK	56802,-1137571
chr2:128567452-128567924	chr2	+	128567508	128567908	True	NM_032740,NM_018383,NM_001006622,NM_001006623	chr2,chr2,chr2,chr2	+,-,-,-	SFT2D3,WDR33,WDR33,WDR33	-108972,903,903,903
chr5:100240668-100241068	chr5	+	100240687	100240944	True	NM_005668,NM_175052,NM_198507	chr5,chr5,chr5	-,-,+	ST8SIA4,ST8SIA4,FAM174A	-1700,-1717,-369614
chr5:169019312-169021234	chr5	+	169019637	169021250	True	NM_017785,NM_003062	chr5,chr5	+,-	CCDC99,SLIT3	-9051,-291504
chr19:13080434-13081653	chr19	+	13080452	13081388	True	NM_152654,NM_052850	chr19,chr19	+,-	DAND5,GADD45GIP1	-71,-12402
chr3:193930973-193931669	chr3	+	193930980	193931516	True	NR_024480,NM_005524	chr3,chr3	-,+	LOC100131551,HES1	99133,-77100
chr11:83949059-83950345	chr11	+	83949124	83950041	True	NM_182603,NM_001142700	chr11,chr11	+,-	ANKRD42,DLG2	-1043884,34332
chr11:4676363-4678288	chr11	+	4676374	4678124	True	NM_030774,NM_152430	chr11,chr11	-,+	OR51E2,OR51E1	41016,-11270
chr15:65822845-65823063	chr15	+	65822979	65823071	True	NM_197961,NM_016395	chr15,chr15	-,+	DPP8,PTPLAD1	-12944,-203
chr19:46807507-46808490	chr19	+	46807624	46808474	True	NM_152796,NM_152795,NM_152794,NM_022462,NM_032040	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	HIF3A,HIF3A,HIF3A,HIF3A,CCDC8	-6042,-7372,-819,-6042,108495
chr22:33199357-33200578	chr22	+	33199537	33200399	True	NM_003490,NM_000362	chr22,chr22	-,+	SYN3,TIMP3	202458,-2786
chr13:29170478-29171360	chr13	+	29170509	29171168	True	NM_001160031,NM_015932	chr13,chr13	-,+	FLT1,POMP	-101244,61972
chr19:38806149-38806487	chr19	+	38806223	38806517	True	NM_001039673,NM_001145461,NM_001039671,NM_001039672,NM_001145462,NM_033557,NM_001145463,NM_004823	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,+	YIF1B,YIF1B,YIF1B,YIF1B,YIF1B,YIF1B,YIF1B,KCNK6	139,-22,-22,139,-22,-5714,139,3966
chr8:68254035-68254784	chr8	+	68254439	68254827	True	NM_024790,NM_006421	chr8,chr8	+,-	CSPP1,ARFGEF1	-277897,1135
chr6:58284124-58284488	chr6	+	58284243	58284303	True	NM_000947,NR_003660	chr6,chr6	+,-	PRIM2,GUSBP4	-1101875,3471
chr6:58284124-58284488	chr5	-	21462984	21463044	False	NR_027027,NR_027026,NM_004061,NR_027028	chr5,chr5,chr5,chr5	+,+,-,+	GUSBP1,GUSBP1,CDH12,GUSBP1	-3446,-3446,1390740,-3446
chrX:18708288-18709256	chrX	+	18708392	18709294	True	NM_000330,NM_152224,NM_152226,NM_006240	chrX,chrX,chrX,chrX	-,+,+,+	RS1,PPEF1,PPEF1,PPEF1	-18169,36,36,36
chr19:45312515-45313014	chr19	+	45312579	45312997	True	NM_001013257,NM_005581,NR_027754	chr19,chr19,chr19	+,+,-	BCAM,BCAM,CEACAM22P	-292,-292,-252429
chrX:136648493-136648797	chrX	+	136648539	136648811	True	NM_054021,NM_003413	chrX,chrX	-,+	GPR101,ZIC3	-534706,-248
chr5:175133741-175135005	chr5	+	175133755	175134601	True	NM_022304,NM_032361	chr5,chr5	+,-	HRH2,THOC3	-25342,260994
chr2:28742886-28743696	chr2	+	28743319	28743543	True	NM_017910,NM_153021	chr2,chr2	-,+	TRMT61B,PLB1	349682,-24442
chr17:19439947-19440450	chr17	+	19439950	19440424	True	NM_002404,NM_018242	chr17,chr17	-,+	MFAP4,SLC47A1	-149418,-2834
chr19:49866059-49866301	chr19	+	49866086	49866343	True	NM_014419,NM_003598,NM_001197302,NM_001197301	chr19,chr19,chr19,chr19	+,-,+,+	DKKL1,TEAD2,DKKL1,DKKL1	698,-372,643,698
chr1:24018279-24018518	chr1	+	24018322	24018546	True	NM_001199802,NM_001127621,NM_000975	chr1,chr1,chr1	+,-,+	RPL11,GALE,RPL11	-104,107564,-104
chr10:43952187-43952616	chr10	+	43952378	43952527	True	NR_026693,NM_001098204	chr10,chr10	+,-	ZNF487P,HNRNPF	-19856,-47682
chr3:19988757-19989094	chr3	+	19988916	19988978	True	NM_144715,NM_004162	chr3,chr3	-,+	EFHB,RAB5A	-13210,-395
chr8:103540364-103541117	chr8	+	103540450	103541142	True	NM_024410,NM_015902	chr8,chr8	+,-	ODF1,UBR5	22705,-115533
chr9:34589723-34590134	chr9	+	34589785	34589989	True	NR_024369,NM_001842,NM_147164	chr9,chr9,chr9	+,-,-	LOC415056,CNTFR,CNTFR	-21826,-63,-63
chr16:48657915-48658191	chr16	+	48657922	48657996	True	NM_153029,NM_031490	chr16,chr16	-,+	N4BP1,LONP2	-13802,-379762
chr6:31325193-31325815	chr6	+	31325488	31325709	True	NM_005514,NR_036523	chr6,chr6	-,+	HLA-B,MICA	-499,41851
chr6:31325193-31325815	chr6_cox_hap2	+	2838176	2838397	False	NM_005514,NR_036523	chr6_cox_hap2,chr6_cox_hap2	-,+	HLA-B,MICA	-499,41859
chr2:97404568-97405493	chr2	+	97404792	97405394	True	NM_020184,NR_024518,NR_024519,NM_001142292,NR_024521,NR_024520,NM_030805	chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-,-	CNNM4,LMAN2L,LMAN2L,LMAN2L,LMAN2L,LMAN2L,LMAN2L	21244,469,469,469,469,469,469
chr20:30026247-30027888	chr20	+	30026402	30027936	True	NM_153324,NM_001171832	chr20,chr20	+,-	DEFB123,DEFB121	474,-25761
chr6:150259156-150259756	chr6	+	150259481	150259805	True	NM_025217,NM_001001788	chr6,chr6	+,-	ULBP2,RAET1G	3330,-15267
chr8:75258153-75259052	chr8	+	75258201	75258880	True	NM_018972,NM_001040875,NM_020647	chr8,chr8,chr8	+,+,-	GDAP1,GDAP1,JPH1	3737,3772,-24639
chr10:72363270-72363726	chr10	+	72363402	72363772	True	NM_001083116,NM_080722,NM_005041	chr10,chr10,chr10	-,+,-	PRF1,ADAMTS14,PRF1	-871,68786,-871
chr3:15185153-15185798	chr11	-	67691474	67691524	True	NM_030930,NM_001161473	chr11,chr11	-,+	UNC93B1,ALDH3B1	80119,84523
chrY:23759184-23759771	chrY	+	23759515	23759805	True	NM_001006120,NR_001537	chrY,chrY	+,-	RBMY1D,TTTY13	-62761,-2963
chr16:90083870-90084772	chr16	+	90083960	90084768	True	NM_001042610,NR_023348,NM_024043	chr16,chr16,chr16	-,+,-	DBNDD1,GAS8,DBNDD1	1219,4239,-7431
chr1:8000337-8000861	chr1	+	8000338	8000878	True	NM_001561,NM_001123377	chr1,chr1	-,+	TNFRSF9,PARK7	2397,20835
chr1:48452827-48453430	chr1	+	48452878	48453404	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	9208,234952
chr5:72020863-72022136	chr5	+	72021204	72022012	True	NM_152625,NM_002270	chr5,chr5	-,+	ZNF366,TNPO1	-217955,90405
chr7:36193909-36194362	chr7	+	36193990	36194160	True	NM_030636,NM_001199707	chr7,chr7	+,-	EEPD1,KIAA0895	-1205,212672
chr22:37882729-37883710	chr22	+	37882766	37883753	True	NM_001166343,NM_152243,NR_029413,NM_002405	chr22,chr22,chr22,chr22	-,+,-,-	MFNG,CDC42EP1,MFNG,MFNG	-341,72717,-288,-288
chr1:1951610-1953036	chr1	+	1951829	1952951	True	NM_000815,NM_001080484	chr1,chr1	+,-	GABRD,KIAA1751	-1112,-16553
chr14:73359485-73359778	chr14	+	73359513	73359659	True	NM_012074,NM_001163508	chr14,chr14	-,+	DPF3,DCAF4	1200,33380
chr2:164593468-164593974	chr2	+	164593651	164594007	True	NM_012198,NM_018086	chr2,chr2	+,-	GCA,FIGN	-1393127,-1138
chr22:39852138-39852479	chr22	+	39852152	39852242	True	NM_002409,NM_194326	chr22,chr22	+,-	MGAT3,RPS19BP1	1082,76668
chr17:33756336-33757224	chr17	+	33756442	33757211	True	NR_003037,NM_018042	chr17,chr17	+,-	SNORD7,SLFN12	143464,2384
chr9:33278365-33279783	chr9	+	33278365	33279382	True	NM_147134,NM_004323	chr9,chr9	+,-	NFX1,BAG1	11035,-13606
chr22:25002393-25002842	chr22	+	25002584	25002680	True	NM_005265,NM_207644,NM_001032365,NM_001032364	chr22,chr22,chr22,chr22	+,-,+,+	GGT1,C22orf36,GGT1,GGT1	-3455,-13549,945,-3511
chr22:25002393-25002842	chr22	-	24014148	24014198	False	NM_153615,NM_016449	chr22,chr22	+,-	RGL4,C22orf43	18849,-39640
chr12:48098532-48099389	chr12	+	48098814	48099304	True	NM_001146076,NM_001146075,NM_017842,NM_024604	chr12,chr12,chr12,chr12	-,-,+,-	RPAP3,RPAP3,SLC48A1,RPAP3	590,590,67662,590
chr7:65862564-65863582	chr7	+	65862649	65863507	True	NR_026873,NM_003596	chr7,chr7	-,+	NCRNA00174,TPST1	1938,-192441
chr19:20277276-20278002	chr19	+	20277439	20278050	True	NM_033196,NM_052852	chr19,chr19	-,+	ZNF682,ZNF486	-127162,32
chr9:113080451-113080940	chr9	+	113080459	113080679	True	NM_001136562,NM_001003936	chr9,chr9	+,-	AKAP2,TXNDC8	-192729,19504
chr1:226071857-226072224	chr1	+	226071857	226072048	True	NM_020997,NM_000120,NM_014698	chr1,chr1,chr1	-,+,-	LEFTY1,EPHX1,TMEM63A	4861,-58906,-1437
chr2:88050089-88050623	chr2	+	88050143	88050609	True	NM_001032392,NM_001078170,NM_002665	chr2,chr2,chr2	+,-,+	PLGLB1,RGPD2,PLGLB2	-2584,74727,-2588
chr2:88050089-88050623	chr2	-	87245967	87246433	False	NM_001032392,NM_002665,NM_001024457	chr2,chr2,chr2	-,-,+	PLGLB1,PLGLB2,RGPD1	2586,2590,-101280
chr6:148887166-148887449	chr6	+	148887168	148887385	True	NM_207360,NM_005715	chr6,chr6	-,+	ZC3H12D,UST	918818,180885
chrX:57021769-57021998	chrX	+	57021772	57021980	True	NR_027139,NM_001010862,NR_015367	chrX,chrX,chrX	-,-,+	SPIN3,SPIN3,LOC550643	58,58,-266105
chr17:18214698-18216346	chr17	+	18214923	18216137	True	NM_004618,NM_144775	chr17,chr17	-,+	TOP3A,SMCR8	2235,2456
chr11:134283508-134284560	chr11	+	134283632	134284521	True	NM_018644,NR_033852	chr11,chr11	-,+	B3GAT1,LOC283177	-1820,21854
chr1:33502739-33503158	chr1	+	33502739	33503167	True	NM_001625,NR_037592,NM_001199199,NM_013411,NR_037591,NM_052998	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,+	AK2,AK2,AK2,AK2,AK2,ADC	-227,-227,-227,-227,-227,43546
chr19:5914967-5915339	chr19	+	5915098	5915318	True	NR_034166,NM_004058,NM_080590	chr19,chr19,chr19	-,+,+	NDUFA11,CAPS,CAPS	-11074,-956,-956
chr12:72233057-72233420	chr12	+	72233181	72233304	True	NR_027449,NM_022771,NM_001146214,NM_001146213,NR_024072	chr12,chr12,chr12,chr12,chr12	+,+,+,+,-	TBC1D15,TBC1D15,TBC1D15,TBC1D15,MRS2P2	182,182,182,182,11516
chr1:236445308-236445516	chr1	+	236445392	236445516	True	NM_145861,NM_019891	chr1,chr1	+,-	EDARADD,ERO1LB	112163,-53
chr13:21834522-21834733	chr13	+	21834528	21834782	True	NM_145061,NM_024026	chr13,chr13	-,+	SKA3,MRP63	-83787,-84207
chr2:154335434-154335723	chr2	+	154335486	154335722	True	NM_019845,NM_052917	chr2,chr2	-,+	RPRM,GALNT13	-164,392703
chr15:42841940-42842317	chr15	+	42841982	42842333	True	NM_001130447,NM_153260,NM_018097	chr15,chr15,chr15	+,-,+	HAUS2,LRRC57,HAUS2	-1025,-980,-1025
chr6:41866657-41867897	chr6	+	41866831	41867342	True	NM_018561,NM_004053	chr6,chr6	-,+	USP49,BYSL	-3732,21622
chr21:17445745-17447039	chr21	+	17445757	17447077	True	NM_003489,NR_027790	chr21,chr21	-,+	NRIP1,C21orf34	-1008631,-2975
chr12:120767076-120768142	chr12	+	120767076	120767707	True	NM_000928,NM_012240	chr12,chr12	-,+	PLA2G1B,SIRT4	-1484,-27010
chrX:57333704-57334717	chrX	+	57333704	57334390	True	NM_019003,NM_174912	chrX,chrX	-,+	SPIN2A,FAAH2	-169646,-20658
chr2:217363362-217363795	chr2	+	217363368	217363516	True	NM_000998,NM_020814	chr2,chr2	+,-	RPL37A,MARCH4	3,-126618
chr15:75251151-75251366	chr15	+	75251305	75251415	True	NM_017793,NM_001178111	chr15,chr15	-,+	RPP25,SCAMP5	-1530,36460
chr12:121570087-121570776	chr12	+	121570101	121570703	True	NM_198213,NM_002562,NR_033949,NR_033948,NR_033952,NR_033953,NR_033950,NR_033951,NR_033956,NR_033954,NR_033955	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,+,+,+,+,+,+,+,+	OASL,P2RX7,P2RX7,P2RX7,P2RX7,P2RX7,P2RX7,P2RX7,P2RX7,P2RX7,P2RX7	-93321,-40,-40,-40,-40,-49,-40,-40,-40,-40,-40
chr6:52931049-52931483	chr6	+	52931141	52931507	True	NM_012347,NM_014920,NM_033481,NM_033480,NM_016513	chr6,chr6,chr6,chr6,chr6	+,-,+,+,-	FBXO9,ICK,FBXO9,FBXO9,ICK	4263,-4541,-1396,-935,-4541
chr7:102254918-102255962	chr7	+	102255081	102255869	True	NM_001079877,NM_001031618,NM_006989	chr7,chr7,chr7	-,+,-	RASA4,SPDYE2,RASA4	1386,34902,1386
chr7:102254918-102255962	chr7	+	102156102	102156890	False	NM_001031618,NM_006234	chr7,chr7	+,-	SPDYE2,POLR2J	34788,-36721
chr3:20227480-20227836	chr3	+	20227537	20227847	True	NM_001012409,NM_003884,NM_001012413,NM_001012412,NM_001012411,NM_001012410,NM_001199257,NM_001199256,NM_001199255,NM_001199254,NM_001199253,NM_138484,NM_001199251,NM_001199252	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-,-,-,-,-,-,-,-,-	SGOL1,KAT2B,SGOL1,SGOL1,SGOL1,SGOL1,SGOL1,SGOL1,SGOL1,SGOL1,SGOL1,SGOL1,SGOL1,SGOL1	19,-146064,19,19,19,19,45,45,45,45,45,19,45,45
chrX:77164892-77165330	chrX	+	77164953	77165373	True	NM_000052,NM_032121	chrX,chrX	+,-	ATP7A,MAGT1	820,-13888
chr17:42203421-42203819	chr17	+	42203607	42203791	True	NM_001015053,NM_001171251,NM_005474	chr17,chr17,chr17	-,+,-	HDAC5,C17orf53,HDAC5	-2593,15482,-2593
chr10:102045177-102045476	chr10	+	102045331	102045517	True	NM_005063,NM_001001342,NM_173809	chr10,chr10,chr10	+,-,-	SCD,BLOC1S2,BLOC1S2	61254,647,972
chr6:139353394-139354136	chr6	+	139353423	139354062	True	NM_031922,NM_021243	chr6,chr6	-,+	REPS1,C6orf115	-44025,-3656
chr12:15710912-15711346	chr12	+	15711172	15711394	True	NM_004447,NM_030671	chr12,chr12	-,+	EPS8,PTPRO	231170,-11938
chr3:122100429-122101061	chr3	+	122100639	122100965	True	NM_014367,NM_001017928	chr3,chr3	+,-	FAM162A,CCDC58	2057,1169
chr11:101375525-101376465	chr11	+	101375577	101376459	True	NR_037485,NM_020802	chr11,chr11	-,+	MIR3920,KIAA1377	14227,409286
chr10:100206923-100208207	chr10	+	100207040	100207721	True	NM_182639,NM_014472,NM_000195	chr10,chr10,chr10	-,+,-	HPS1,C10orf28,HPS1	-336,-312711,-336
chr10:29584584-29586325	chr10	+	29584584	29586358	True	NR_030335,NM_032517	chr10,chr10	-,+	MIR604,LYZL1	247718,-6645
chr22:43806404-43807276	chr22	+	43806570	43807264	True	NM_173050,NM_001044370	chr22,chr22	-,+	SCUBE1,MPPED1	-67215,755
chr5:10587506-10588799	chr5	+	10587559	10588761	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-23190,172684
chr15:30864791-30865029	chr15	+	30864836	30864916	True	NR_027470,NM_148911,NR_026858	chr15,chr15,chr15	+,-,+	FAM7A2,CHRFAM7A,FAM7A1	-129,-178972,-129
chr15:30864791-30865029	chr15	-	32727091	32727171	False	NR_027470,NR_026859,NR_026858,NM_199357	chr15,chr15,chr15,chr15	-,-,-,+	FAM7A2,FAM7A3,FAM7A1,ARHGAP11A	129,-26,129,180519
chr15:30864791-30865029	chr15	+	30395828	30395908	False	NR_026859,NM_175610	chr15,chr15	+,-	FAM7A3,TJP1	26,-281122
chr15:30864791-30865029	chr15	-	30685757	30685837	False	NM_148911,NM_139320,NR_026858	chr15,chr15,chr15	-,-,+	CHRFAM7A,CHRFAM7A,FAM7A1	77,77,178920
chr17:73510669-73511105	chr17	+	73510751	73511083	True	NM_207346,NM_020753,NM_001142643	chr17,chr17,chr17	+,-,-	TSEN54,CASKIN2,CASKIN2	1525,594,-4793
chr3:121770621-121771511	chr3	+	121770621	121771371	True	NM_175862,NM_001199799	chr3,chr3	+,-	CD86,ILDR1	2849,-29494
chr14:105937760-105938445	chr14	+	105937846	105938386	True	NM_001312,NM_001519	chr14,chr14	+,-	CRIP2,BRF1	2744,-170517
chr16:90112062-90113246	chr16	+	90112519	90113045	True	NR_027336,NR_027335,NR_023348	chr16,chr16,chr16	-,-,+	LOC100130015,LOC100130015,GAS8	1196,1038,-23562
chr19:47635444-47636641	chr19	+	47635824	47636472	True	NM_015168,NR_027280,NM_001145713,NM_005500,NM_001145714	chr19,chr19,chr19,chr19,chr19	-,+,+,+,+	ZC3H4,SAE1,SAE1,SAE1,SAE1	-18815,-1760,-1795,-1795,-1795
chr17:36508925-36509506	chr17	+	36508972	36509476	True	NM_001004334,NM_014598	chr17,chr17	-,+	GPR179,SOCS7	-9279,-1017
chr19:17338422-17339084	chr19	+	17338609	17339127	True	NM_005234,NM_024578	chr19,chr19	-,+	NR2F6,OCEL1	17074,-1605
chr2:163142822-163143477	chr2	+	163142849	163143409	True	NM_022168,NM_012198	chr2,chr2	-,+	IFIH1,GCA	31690,57173
chr16:57768643-57769044	chr16	+	57768668	57769022	True	NM_001130099,NM_005886	chr16,chr16	-,+	KIFC3,KATNB1	62957,637
chr4:70619298-70620299	chr4	+	70619297	70620347	True	NM_014465,NM_001025104	chr4,chr4	-,+	SULT1B1,CSN1S1	6146,176451
chr4:88890126-88892052	chr4	+	88890461	88892053	True	NM_001040058,NM_001040060,NM_000582,NM_004827	chr4,chr4,chr4,chr4	+,+,+,-	SPP1,SPP1,SPP1,ABCG2	4748,4748,4748,188016
chr4:52708393-52708816	chr4	+	52708504	52708806	True	NM_001040402,NM_015115,NM_001024611	chr4,chr4,chr4	+,+,-	DCUN1D4,DCUN1D4,LRRC66	469,469,175030
chr1:119533067-119534642	chr1	+	119533443	119534657	True	NM_001005783,NM_152380	chr1,chr1	+,-	HAO2,TBX15	376744,-1264
chr2:131852271-131853193	chr2	+	131852460	131853202	True	NM_001100623,NM_001009993,NM_017958	chr2,chr2,chr2	+,-,+	PLEKHB2,FAM168B,PLEKHB2	9217,-1456,9217
chr19:17583127-17584525	chr19	+	17583227	17584297	True	NM_198580,NM_138454	chr19,chr19	+,-	SLC27A1,NXNL1	-1978,-11502
chr12:50299187-50301043	chr12	+	50299703	50301006	True	NM_000486,NM_012306,NR_026948	chr12,chr12,chr12	+,-,-	AQP2,FAIM2,LOC283332	43517,-1943,4697
chr6:168837627-168838178	chr6	+	168837667	168838170	True	NM_214462,NM_001166412,NM_022138	chr6,chr6,chr6	-,+,+	DACT2,SMOC2,SMOC2	-117265,3660,3660
chr6:43398649-43399662	chr6	+	43398860	43399690	True	NM_023932,NM_033450,NM_001198934	chr6,chr6,chr6	-,+,+	DLK2,ABCC10,ABCC10	23646,-49,-3621
chrX:9751287-9752317	chrX	+	9751324	9752217	True	NM_000273,NM_001649	chrX,chrX	-,+	GPR143,SHROOM2	-17319,2278
chr19:48213306-48214172	chr19	+	48213494	48214057	True	NM_014601,NM_198479	chr19,chr19	+,-	EHD2,TPRX1	2543,92861
chr2:105858277-105858501	chr2	+	105858303	105858533	True	NM_001142621,NM_007227	chr2,chr2	-,+	TGFBRAP1,GPR45	87665,-154
chr3:151055979-151056471	chr3	+	151056035	151056516	True	NM_053002,NM_176876,NM_176894	chr3,chr3,chr3	+,-,-	MED12L,P2RY12,P2RY13	-251422,2126,-8698
chr5:124077041-124078286	chr5	+	124077191	124078152	True	NM_004384,NM_020747	chr5,chr5	+,-	CSNK1G3,ZNF608	-1229450,2704
chr4:56417149-56417775	chr4	+	56417626	56417794	True	NM_004898,NM_018475	chr4,chr4	-,+	CLOCK,TMEM165	-4629,-155601
chr17:17287838-17289107	chr17	+	17287939	17289007	True	NM_003653,NM_020201	chr17,chr17	-,+	COPS3,NT5M	-103322,-81310
chr21:45704035-45704354	chr21	+	45704075	45704233	True	NM_175867,NM_000658,NM_000383	chr21,chr21,chr21	-,+,+	DNMT3L,AIRE,AIRE	-21976,6040,1529
chr1:154955977-154956488	chr1	+	154955988	154956274	True	NM_025207,NM_001202859,NM_001826,NM_018655,NR_036212,NM_001184892,NM_001184891,NR_024163,NM_001130041,NM_201398,NM_003029	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,-,+,+,+,+,+,+,-,+,-	FLAD1,SHC1,CKS1B,LENEP,MIR4258,FLAD1,FLAD1,CKS1B,SHC1,FLAD1,SHC1	-269,-9029,-8921,9787,-7870,-269,-269,-8921,-9029,-269,-9029
chr11:119041774-119042586	chr11	+	119041855	119042387	True	NM_001145018,NM_170722,NM_024618	chr11,chr11,chr11	-,+,+	CCDC153,NLRX1,NLRX1	24247,-2466,-2466
chr8:142139936-142141173	chr8	+	142140036	142141211	True	NM_001080431,NM_014957	chr8,chr8	-,+	SLC45A4,DENND3	97512,-1367
chr4:88343972-88344183	chr4	+	88343999	88344211	True	NM_198038,NM_024047,NM_016245	chr4,chr4,chr4	+,+,-	NUDT9,NUDT9,HSD17B11	-315,-315,-31544
chr10:104615813-104616940	chr10	+	104615895	104616901	True	NM_000102,NM_144591,NR_037644,NM_001136200	chr10,chr10,chr10,chr10	-,+,+,+	CYP17A1,C10orf32,C10orf32-AS3MT,C10orf32	-18605,-1980,-1980,-1980
chr3:197351684-197352161	chr3	+	197351683	197351903	True	NR_003266,NM_001011537	chr3,chr3	-,+	LOC220729,FYTTD1	2902,124520
chr3:197351684-197352161	chr3	+	195714161	195714310	False	NR_034088,NR_003264	chr3,chr3	+,-	LOC401109,SDHAP1	155196,2893
chr3:197351684-197352161	chr3	-	195387791	195387940	False	NM_001647,NR_003265	chr3,chr3	-,+	APOD,SDHAP2	-76715,-2935
chr8:27696795-27697082	chr8	+	27696799	27697043	True	NM_001017420,NM_018492	chr8,chr8	+,-	ESCO2,PBK	-64792,-1450
chr22:32598029-32598513	chr22	+	32598099	32598461	True	NM_006605,NR_033411,NM_001098527,NM_001159546,NM_001159545	chr22,chr22,chr22,chr22,chr22	-,+,-,-,-	RFPL2,SLC5A1,RFPL2,RFPL2,RFPL2	-8633,-142993,1053,126,2307
chr12:128102861-128104720	chr12	+	128103047	128104720	True	NR_033970,NR_033987	chr12,chr12	-,+	LOC440117,FLJ37505	-743811,261441
chr16:29972389-29972667	chr16	+	29972483	29972703	True	NM_001083613,NM_003609,NM_194280	chr16,chr16,chr16	+,-,+	TMEM219,HIRIP3,TMEM219	647,34759,647
chr7:74185861-74186586	chr7	+	74185956	74186563	True	NM_173537,NM_000265	chr7,chr7	-,+	GTF2IRD2,NCF1	81328,1745
chr7:74185861-74186586	chr7	-	74589567	74590176	False	NM_001003795,NR_003187	chr7,chr7	+,-	GTF2IRD2B,NCF1C	-81271,-1751
chr7:74185861-74186586	chr7	+	72632251	72632862	False	NR_002164,NR_003186	chr7,chr7	-,+	GTF2IRD2P1,NCF1B	52846,1811
chr12:6931523-6932201	chr12	+	6931567	6932159	True	NM_014262,NM_031299,NM_019858,NM_014449	chr12,chr12,chr12,chr12	+,-,+,+	LEPREL2,CDCA3,GPR162,GPR162	5412,28347,-655,-655
chr21:46295004-46295563	chr21	+	46295076	46295601	True	NM_058190,NM_004339	chr21,chr21	+,-	C21orf70,PTTG1IP	64353,-1258
chr15:57893873-57894902	chr15	+	57894020	57894848	True	NM_152451,NM_001018100,NM_001018091,NM_001018090,NM_170697	chr15,chr15,chr15,chr15,chr15	+,+,+,+,-	GCOM1,GCOM1,GCOM1,GCOM1,ALDH1A2	-9969,-9969,-9969,-9969,411437
chr19:57715506-57716185	chr19	+	57715648	57716202	True	NM_001012729,NM_003417	chr19,chr19	-,+	DUXA,ZNF264	-36792,-12831
chr1:11254811-11255780	chr1	+	11254842	11255806	True	NM_021146,NM_004958	chr1,chr1	+,-	ANGPTL7,MTOR	-5495,66852
chr18:10528037-10529489	chr18	+	10528303	10529181	True	NM_003826,NM_022068	chr18,chr18	+,-	NAPG,FAM38B	-2483,619630
chr5:140735609-140735850	chr5	+	140735681	140735899	True	NM_032095,NM_018923,NM_018922,NM_032096,NM_032054,NM_018918,NM_032053,NM_005642,NM_018917	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,+,-,+	PCDHGB1,PCDHGB2,PCDHGB1,PCDHGB2,PCDHGA5,PCDHGA5,PCDHGA4,TAF7,PCDHGA4	-5906,3803,-5906,3803,7998,7998,-966,-35330,-966
chr19:10681079-10681769	chr19	+	10681424	10681598	True	NM_079421,NM_023008,NR_031603,NM_001800	chr19,chr19,chr19,chr19	-,-,+,-	CDKN2D,KRI1,MIR1238,CDKN2D	-1769,-4722,-18677,-1793
chr4:16219745-16221084	chr4	+	16220107	16221133	True	NM_153365,NR_027696,NR_027697	chr4,chr4,chr4	-,+,+	TAPT1,FLJ39653,FLJ39653	7078,7152,7152
chr17:61904322-61904749	chr17	+	61904432	61904659	True	NM_002805,NM_001199163,NM_017647	chr17,chr17,chr17	+,+,-	PSMC5,PSMC5,FTSJ3	110,384,423
chr4:159455692-159456921	chr4	+	159455877	159456943	True	NM_001008393,NM_021634	chr4,chr4	-,+	C4orf46,RXFP1	136311,-12881
chr13:19583906-19585269	chr13	+	19583952	19585280	True	NR_002801,NR_026852	chr13,chr13	-,+	PHF2P1,LOC348021	107193,-1611
chrX:138892536-138894226	chrX	+	138892862	138894201	True	NM_000133,NM_001010986	chrX,chrX	+,-	F9,ATP11C	-280024,20311
chr17:46507743-46507970	chr17	+	46507801	46507895	True	NM_001075099,NR_033201,NM_003726	chr17,chr17,chr17	-,+,-	SKAP1,LOC404266,SKAP1	-207,159927,-207
chr1:36348989-36349199	chr1	+	36349001	36349151	True	NM_012199,NM_022111	chr1,chr1	+,-	EIF2C1,CLSPN	-242,-113450
chr20:1253741-1254456	chr20	+	1253846	1254492	True	NM_014723,NM_015685	chr20,chr20	+,-	SNPH,SDCBP2	-6937,39877
chr12:62585748-62586222	chr12	+	62585901	62586257	True	NM_178539,NM_006313	chr12,chr12	-,+	FAM19A2,USP15	344,67929
chr6:52940024-52940700	chr6	+	52940114	52940521	True	NM_012347,NM_016513,NM_033480	chr6,chr6,chr6	+,-,+	FBXO9,ICK,FBXO9	-4399,-13514,-9913
chr8:145162562-145162788	chr8	+	145162569	145162739	True	NM_030974,NR_024207,NM_032272	chr8,chr8,chr8	-,+,+	SHARPIN,KIAA1875,MAF1	-3429,9,-3315
chr20:62204410-62204799	chr20	+	62204521	62204809	True	NM_033405,NM_024059,NM_001037335	chr20,chr20,chr20	-,+,-	PRIC285,C20orf195,PRIC285	-5414,-20199,833
chr16:31213136-31213443	chr16	+	31213203	31213491	True	NM_145182,NM_001008274,NM_013258	chr16,chr16,chr16	-,+,-	PYCARD,TRIM72,PYCARD	656,11850,656
chr22:43537877-43538347	chr22	+	43537931	43538266	True	NM_173467,NM_014507,NM_007311,NM_000714	chr22,chr22,chr22,chr22	-,-,+,+	MCAT,MCAT,TSPO,TSPO	1188,1188,9268,9268
chr22:50970882-50971599	chr22	+	50970895	50971298	True	NM_005138,NM_001953,NM_001169111,NM_001169110,NM_001113756,NM_001169109,NM_001113755,NM_001014440,NM_138433	chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,-,-,-,-,+	SCO2,TYMP,SCO2,SCO2,TYMP,SCO2,TYMP,ODF3B,KLHDC7B	-6861,-2381,-6862,-6321,-2637,-6027,-2381,103,15163
chr20:33879805-33880041	chr20	+	33879846	33880040	True	NM_006690,NM_002212,NM_181466,NM_178468,NM_181468	chr20,chr20,chr20,chr20,chr20	+,-,-,-,-	MMP24,EIF6,EIF6,FAM83C,EIF6	-65358,-7252,-7252,235,-7340
chr14:32027638-32029308	chr14	+	32027654	32028574	True	NR_036675,NM_025152	chr14,chr14	-,+	GPR33,NUBPL	-70503,2016
chr6:14946884-14948724	chr6	+	14947065	14948704	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	297822,714648
chr21:34913734-34914375	chr21	+	34913816	34914236	True	NM_175085,NM_138927,NM_000819,NM_001136005,NM_032195,NM_001136006	chr21,chr21,chr21,chr21,chr21,chr21	-,+,-,-,+,-	GART,SON,GART,GART,SON,GART	278,1113,278,1009,1113,1012
chr2:16083022-16083250	chr2	+	16083036	16083218	True	NR_026766,NM_005378	chr2,chr2	-,+	MYCNOS,MYCN	-1191,-2404
chr8:37757931-37758827	chr8	+	37758034	37758868	True	NM_001002814,NM_025151,NM_032777	chr8,chr8,chr8	-,-,+	RAB11FIP1,RAB11FIP1,GPR124	-1019,-1019,-103684
chr12:3951142-3951872	chr12	+	3951145	3951850	True	NM_019854,NM_020367	chr12,chr12	+,-	PRMT8,PARP11	-350771,30808
chr2:70315433-70315638	chr2	+	70315446	70315686	True	NM_006196,NR_033872	chr2,chr2	+,-	PCBP1,LOC400960	-912,-1299
chr1:157552156-157552695	chr1	+	157552212	157552673	True	NM_018240,NM_031282	chr1,chr1	+,-	KIRREL,FCRL4	410389,15248
chr11:62497001-62497638	chr11	+	62497354	62497540	True	NM_001079559,NR_037946,NM_173810	chr11,chr11,chr11	-,-,+	HNRNPUL2,HNRNPUL2-BSCL2,TTC9C	-2497,-2498,-1463
chr8:22088474-22088997	chr8	+	22088517	22088959	True	NM_001722,NM_001099335,NM_014759	chr8,chr8,chr8	+,-,-	POLR3D,PHYHIP,PHYHIP	13659,942,942
chr16:10971414-10971804	chr16	+	10971438	10971690	True	NM_000246,NM_001079512	chr16,chr16	+,-	CIITA,FAM18A	-434,-58817
chrX:127185603-127186479	chrX	+	127185633	127186339	True	NM_138289,NM_001122716	chrX,chrX	-,+	ACTRT1,CXorf64	93,-1231937
chr11:68779882-68780354	chr11	+	68779937	68780339	True	NM_139075,NM_001098515,NM_145015	chr11,chr11,chr11	+,-,-	TPCN2,MRGPRF,MRGPRF	36010,561,561
chr16:4666813-4667076	chr16	+	4666868	4666952	True	NM_001142289,NM_001142291,NM_001142290,NM_145253,NM_015246	chr16,chr16,chr16,chr16,chr16	+,+,+,-,+	MGRN1,MGRN1,MGRN1,FAM100A,MGRN1	7873,7873,7873,-1941,7873
chr2:241524691-241524934	chr2	+	241524697	241524979	True	NM_017844,NM_023083,NM_023085	chr2,chr2,chr2	-,+,+	ANKMY1,CAPN10,CAPN10	-27292,1153,1153
chr7:134143720-134144994	chr7	+	134143769	134145011	True	NM_001628,NM_020299	chr7,chr7	-,+	AKR1B1,AKR1B10	119,67332
chr10:12873647-12874188	chr10	+	12873672	12874234	True	NR_027322,NM_031455	chr10,chr10	+,-	LOC283070,CCDC3	898,169520
chr9:115125094-115126296	chr9	+	115125101	115126319	True	NR_036085,NM_001195822	chr9,chr9	-,+	MIR3134,HSDL2	-12556,15869
chr6:42989688-42989927	chr6	+	42989688	42989832	True	NM_057161,NM_033112,NM_014623	chr6,chr6,chr6	+,+,-	KLHDC3,RRP36,MEA1	-7762,-354,-8070
chr9:131311613-131313556	chr9	+	131311910	131313327	True	NM_001195532,NM_001130438,NM_052844,NM_003127	chr9,chr9,chr9,chr9	+,+,-,+	SPTAN1,SPTAN1,WDR34,SPTAN1	1509,1509,105853,1509
chr4:40760230-40761046	chr4	+	40760266	40761057	True	NM_001166051,NM_024677	chr4,chr4	-,+	APBB2,NSUN7	98165,-8404
chr1:92545212-92545766	chr1	+	92545214	92545744	True	NM_001195684,NM_183242	chr1,chr1	-,+	TGFBR3,BTBD8	-173655,117
chr5:176874704-176874927	chr5	+	176874706	176874958	True	NM_001174102,NM_030567,NM_080881,NM_001174101	chr5,chr5,chr5,chr5	+,+,-,+	PRR7,PRR7,DBN1,PRR7	367,-961,24963,-961
chr10:104212415-104213286	chr10	+	104212437	104213171	True	NM_024789,NM_024886	chr10,chr10	+,-	TMEM180,C10orf95	7998,-1137
chr6:66804816-66806638	chr6	+	66804815	66805901	True	NR_026540,NM_001142801	chr6,chr6	+,-	MCART3P,EYS	-307102,-387697
chr5:140503320-140503608	chr5	+	140503458	140503540	True	NM_031947,NM_018938	chr5,chr5	-,+	SLC25A2,PCDHB4	180122,-1928
chr5:140503320-140503608	chr5	+	140574006	140574072	False	NM_031947,NM_019119,NM_018930,NM_018931	chr5,chr5,chr5,chr5	-,+,+,+	SLC25A2,PCDHB9,PCDHB10,PCDHB11	109590,-7164,-2105,5275
chr3:169381048-169382104	chr3	+	169381100	169382110	True	NM_001205194,NM_004991,NM_001185118	chr3,chr3,chr3	-,-,+	MECOM,MECOM,MYNN	55,55,108742
chrX:51078092-51079340	chrX	+	51078249	51079302	True	NM_018159,NM_153183	chrX,chrX	-,+	NUDT11,NUDT10	160207,-3225
chr12:101801575-101801820	chr12	+	101801629	101801839	True	NM_152323,NM_001177	chr12,chr12	+,-	SPIC,ARL1	69495,-57
chr21:44076613-44077347	chr21	+	44076627	44077299	True	NM_001001585,NM_001001584,NM_001001574,NM_080860,NM_002606,NM_001001578,NM_001001579,NM_001001569,NM_001001568,NM_001001581,NM_001001580,NM_001001583,NM_001001582,NM_001001570,NM_001001571,NM_001001572,NM_001001573,NM_001001567,NM_001001575,NM_001001576,NM_001001577	chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21	+,+,+,-,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+	PDE9A,PDE9A,PDE9A,RSPH1,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A,PDE9A	-2816,-2816,-2816,-160226,-2816,-2816,-2816,-2816,-2816,-2816,-2816,-2816,-2816,-2816,-2816,-2816,-2816,-2816,-2816,-2816,-2816
chr5:180231295-180231942	chr5	+	180231461	180231970	True	NM_001114617,NM_001114618,NM_001114619,NR_027183,NM_002406,NM_001114620	chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,+,-,-	MGAT1,MGAT1,MGAT1,LOC729678,MGAT1,MGAT1	5217,4897,-559,24988,-1413,-559
chr2:86338431-86339246	chr2	+	86338717	86338777	True	NM_015425,NM_017952	chr2,chr2	-,+	POLR1A,PTCD3	-5439,-5464
chr10:30962530-30962753	chr10	+	30962540	30962790	True	NM_183058,NM_005204	chr10,chr10	-,+	LYZL2,MAP3K8	-43893,-239725
chr10:30962530-30962753	chr10	-	29799503	29799753	False	NR_030335,NR_003930	chr10,chr10	-,+	MIR604,LOC387647	34323,-101053
chr22:20010339-20011037	chr22	+	20010358	20011001	True	NM_152906,NR_029706,NM_001670	chr22,chr22,chr22	+,+,-	C22orf25,MIR185,ARVCF	-1778,9660,-6049
chr9:96868177-96869333	chr9	+	96868372	96869154	True	NM_021570,NM_152422	chr9,chr9	-,+	BARX1,PTPDC1	-150764,-21682
chr2:133031757-133033132	chr2	+	133031774	133032875	True	NM_001508,NR_027020	chr2,chr2	+,-	GPR39,ANKRD30BL	141271,-16232
chr16:30121912-30123592	chr16	+	30122199	30123513	True	NR_027081,NM_024307	chr16,chr16	+,-	LOC100271831,GDPD3	1919,1415
chr9:35400997-35401994	chr9	+	35401065	35402039	True	NM_001099951,NR_003582,NR_003581	chr9,chr9,chr9	-,+,+	FAM166B,ATP8B5P,ATP8B5P	161907,4712,4725
chr3:14220298-14222081	chr3	+	14220388	14221691	True	NM_004628,NM_001145769,NR_027299,NM_014463	chr3,chr3,chr3,chr3	-,-,-,+	XPC,XPC,XPC,LSM3	-216,-216,-216,-211
chr8:143486149-143486601	chr8	+	143486274	143486602	True	NM_145003,NM_001702	chr8,chr8	-,+	TSNARE1,BAI1	-1731,58774
chr1:233464970-233465255	chr1	+	233465006	233465126	True	NM_032435,NM_014801	chr1,chr1	+,-	KIAA1804,PCNXL2	-1552,-33547
chr4:128565124-128566373	chr4	+	128565182	128566422	True	NM_152778,NM_015693	chr4,chr4	-,+	MFSD8,INTU	320767,-11146
chrX:128873194-128874679	chrX	+	128873457	128874254	True	NM_017413,NM_003399	chrX,chrX	-,+	APLN,XPNPEP2	-84524,-566
chr20:62603656-62604315	chr20	+	62603814	62604310	True	NM_080621,NM_012469,NM_020713	chr20,chr20,chr20	-,+,-	SAMD10,PRPF6,ZNF512B	6735,8120,-2596
chr5:131630204-131630444	chr5	+	131630241	131630327	True	NM_003059,NM_001142599	chr5,chr5	+,-	SLC22A4,P4HA2	-147,-66685
chr21:33247249-33248585	chr21	+	33247668	33248383	True	NM_020706,NM_014586	chr21,chr21	-,+	SCAF4,HUNK	-143237,-2091
chr10:99078684-99078894	chr10	+	99078731	99078909	True	NM_005479,NM_012083	chr10,chr10	+,-	FRAT1,FRAT2	112,15599
chr19:51537826-51538231	chr19	+	51538022	51538268	True	NM_145894,NM_145895,NM_001136032,NM_019598,NM_001167605,NM_006853,NM_144947,NM_014441	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,+	KLK12,KLK12,KLK11,KLK12,KLK11,KLK11,KLK11,SIGLEC9	0,0,-8150,0,-6732,-6732,-7137,89868
chr10:102749076-102749512	chr10	+	102749148	102749532	True	NM_001163812,NM_001163813,NM_001163814,NM_032112,NM_021830,NM_176794,NM_176793,NM_176792,NM_032429	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,-,+,-,-,-,+	C10orf2,C10orf2,C10orf2,MRPL43,C10orf2,MRPL43,MRPL43,MRPL43,LZTS2	-1906,-1906,-1906,-1876,-1906,-1876,-1876,-1876,7331
chr17:46872960-46873836	chr17	+	46872972	46873665	True	NM_005831,NM_173623	chr17,chr17	+,-	CALCOCO2,TTLL6	34706,-1286
chr13:30015318-30016089	chr13	+	30015354	30016128	True	NM_015233,NM_003045	chr13,chr13	+,-	MTUS2,SLC7A1	-12628,153747
chr5:79550693-79551182	chr5	+	79550704	79551220	True	NM_001174072,NM_178276,NM_001174071,NM_032567	chr5,chr5,chr5,chr5	-,-,-,+	SERINC5,SERINC5,SERINC5,SPZ1	728,728,728,64569
chr20:38876109-38877010	chr20	+	38876139	38876806	True	NM_003286,NM_005461	chr20,chr20	+,-	TOP1,MAFB	780655,441121
chr7:151039108-151040053	chr7	+	151039240	151039890	True	NM_016118,NM_003078	chr7,chr7	+,-	NUB1,SMARCD3	-440,-65009
chr17:10634596-10635578	chr17	+	10634694	10635626	True	NM_001004313,NM_020233	chr17,chr17	-,+	TMEM220,C17orf48	-1048,-33818
chr19:55838019-55838258	chr19	+	55838034	55838240	True	NM_001085488,NM_032701	chr19,chr19	-,+	TMEM150B,SUV420H2	-1326,12980
chr5:96242654-96243305	chr5	+	96242798	96243237	True	NM_001198541,NM_005575	chr5,chr5	-,+	ERAP1,LNPEP	-92950,28108
chr17:4892781-4893896	chr17	+	4892949	4893814	True	NM_001171168,NM_015099,NM_001167986,NM_001167987,NM_006612,NM_001167985,NM_001171167,NM_001171166,NM_213726	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,+,-,-,-,-	CAMTA2,CAMTA2,INCA1,INCA1,KIF1C,INCA1,CAMTA2,CAMTA2,INCA1	-2284,-1989,7142,7142,7428,7142,-2284,-1989,7142
chr6:41606072-41606288	chr6	+	41606203	41606267	True	NM_005586,NM_007162	chr6,chr6	+,-	MDFI,TFEB	-59,96581
chr15:75073871-75074174	chr15	+	75073918	75074154	True	NM_000499,NM_001127190,NM_004383	chr15,chr15,chr15	-,+,+	CYP1A1,CSK,CSK	-56041,270,270
chr20:30799167-30800227	chr20	+	30799361	30800031	True	NM_015352,NM_172236,NM_002657	chr20,chr20,chr20	+,+,-	POFUT1,POFUT1,PLAGL2	-3716,-3716,-3815
chr7:75408115-75408941	chr7	+	75408580	75408646	True	NM_001040456,NM_006072	chr7,chr7	+,-	RHBDD2,CCL26	99670,10468
chr10:35983229-35984531	chr10	+	35983259	35983996	True	NM_153368,NM_031866	chr10,chr10	+,-	GJD4,FZD8	-88981,-52897
chr16:67185214-67185609	chr16	+	67185222	67185608	True	NM_003789,NM_033309,NM_018378	chr16,chr16,chr16	-,-,+	TRADD,B3GNT9,FBXL8	8254,-320,8282
chr3:33841466-33841927	chr3	+	33841654	33841942	True	NM_001162429,NR_027868,NM_013374,NM_015097	chr3,chr3,chr3,chr3	+,+,+,-	PDCD6IP,PDCD6IP,PDCD6IP,CLASP2	-1645,-1645,-1645,-81806
chr14:103754654-103755706	chr14	+	103754785	103755226	True	NR_033938,NM_001969	chr14,chr14	-,+	LOC100131366,EIF5	-99420,45266
chr19:38804192-38804824	chr19	+	38804212	38804661	True	NM_001039673,NM_001145461,NM_001039671,NM_001039672,NM_001145462,NM_033520,NM_033557,NM_001145463,NM_004823	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,+,-,-,+	YIF1B,YIF1B,YIF1B,YIF1B,YIF1B,C19orf33,YIF1B,YIF1B,KCNK6	1996,1835,1835,1996,1835,-9471,-3703,1996,5822
chr15:60296349-60296583	chr15	+	60296411	60296533	True	NM_012182,NM_004330	chr15,chr15	+,-	FOXB1,BNIP2	-41,-314769
chr3:45201285-45201576	chr3	+	45201339	45201577	True	NM_003278,NM_178181	chr3,chr3	+,-	CLEC3B,CDCP1	-133639,-13425
chr17:38575237-38575684	chr17	+	38575245	38575732	True	NM_001552,NM_001067	chr17,chr17	+,-	IGFBP4,TOP2A	23943,-1043
chr17:80172762-80173119	chr17	+	80172912	80173166	True	NM_001042422,NM_198082	chr17,chr17	+,-	SLC16A3,CCDC57	13126,-2223
chr10:11205031-11206754	chr10	+	11205122	11206432	True	NM_001083591,NR_024411,NM_001025076	chr10,chr10,chr10	+,-,+	CELF2,LOC254312,CELF2	560,-210996,560
chr1:151696870-151697434	chr1	+	151696991	151697269	True	NM_001144956,NM_001172649,NM_007185,NM_001172648	chr1,chr1,chr1,chr1	+,-,-,-	RIIAD1,CELF3,CELF3,CELF3	-3029,-8109,-7701,-8199
chr19:58194401-58194949	chr19	+	58194400	58194950	True	NM_001085384,NM_138347	chr19,chr19	-,+	ZNF154,ZNF551	25679,-1098
chr1:149824371-149824642	chr1	+	149824537	149824675	True	NM_001040874,NM_001005464,NM_003548,NR_036461,NM_001034077,NM_003516,NM_021059	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,-,-,+,+	HIST2H2AA4,HIST2H3A,HIST2H4A,HIST2H2BC,HIST2H4B,HIST2H2AA3,HIST2H3C	-1960,-407,8100,-2197,8100,-1960,-407
chr1:149824371-149824642	chr1	-	149812270	149812408	False	NM_001040874,NM_001005464,NM_003548,NR_036461,NM_001034077,NM_003516,NM_021059	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,+,-,+,-,-	HIST2H2AA4,HIST2H3A,HIST2H4A,HIST2H2BC,HIST2H4B,HIST2H2AA3,HIST2H3C	1960,407,-8100,9982,-8100,1960,407
chr3:129158342-129158571	chr3	+	129158428	129158612	True	NM_052985,NM_018262,NM_003925,NM_052990,NM_052989	chr3,chr3,chr3,chr3,chr3	+,+,-,+,+	IFT122,IFT122,MBD4,IFT122,IFT122	355,355,290,355,355
chr3:48412101-48414087	chr3	+	48412108	48414059	True	NM_001159929,NM_207102,NM_001080525,NM_001159927	chr3,chr3,chr3,chr3	+,+,-,+	FBXW12,FBXW12,SPINK8,FBXW12	129,129,-42277,129
chr8:21769964-21770284	chr8	+	21769971	21770323	True	NM_003974,NM_015024	chr8,chr8	-,+	DOK2,XPO7	932,6856
chr19:4473886-4474155	chr19	+	4473965	4474185	True	NM_025241,NM_032631,NM_001001520	chr19,chr19,chr19	-,+,+	UBXN6,HDGFRP2,HDGFRP2	-16174,-1761,-1761
chr5:150400458-150402304	chr5	+	150400478	150402349	True	NM_002084,NM_006058	chr5,chr5	+,-	GPX3,TNIP1	-530,58698
chr1:109007864-109009047	chr5	+	85586698	85587486	False	NR_003719,NR_036243	chr5,chr5	+,-	NBPF22P,MIR4280	-8487,823336
chr1:109007864-109009047	chr1	+	109007863	109008854	True	NM_001102592,NM_001143988	chr1,chr1	-,+	HENMT1,NBPF6	194941,-15010
chr1:109007864-109009047	chr1	-	108770733	108771460	False	NM_001143987,NM_001143989	chr1,chr1	+,-	NBPF6,NBPF4	221443,15293
chr1:234510035-234512010	chr1	+	234510068	234511928	True	NM_001012985,NM_005646	chr1,chr1	+,-	C1orf31,TARBP1	-697,102972
chr9:140100915-140101743	chr9	+	140100918	140101792	True	NM_001144028,NM_001128228,NM_001144026,NM_001144027,NM_053045,NM_014434	chr9,chr9,chr9,chr9,chr9,chr9	+,-,+,+,-,+	NDOR1,TPRN,NDOR1,NDOR1,TMEM203,NDOR1	-854,-5755,-854,-854,-828,-854
chr1:43147898-43148162	chr1	+	43147903	43148111	True	NM_001123395,NM_004559	chr1,chr1	-,+	CLDN19,YBX1	57864,-18
chr17:16875684-16875938	chr17	+	16875724	16875984	True	NM_015134,NM_012452	chr17,chr17	+,-	MPRIP,TNFRSF13B	70122,-322
chr14:91285678-91286269	chr14	+	91285824	91286116	True	NM_001010854,NM_001102366	chr14,chr14	-,+	TTC7B,C14orf159	-3063,294240
chrX:55113833-55115533	chrX	+	55114038	55115574	True	NM_001037968,NM_207339	chrX,chrX	-,+	ALAS2,PAGE2	-56541,46
chr17:1957435-1957669	chr17	+	1957476	1957718	True	NM_006497,NM_001098202,NR_029674,NR_029625	chr17,chr17,chr17,chr17	+,+,-,-	HIC1,HIC1,MIR132,MIR212	674,1885,-4174,-3802
chr16:50733133-50733735	chr16	+	50733169	50733653	True	NM_022162,NM_182854	chr16,chr16	+,-	NOD2,SNX20	-2177,-17905
chr11:107729921-107730166	chr11	+	107729968	107730046	True	NM_017515,NM_017516	chr11,chr11	-,+	SLC35F2,RAB39	-54,69230
chr5:158524909-158525436	chr5	+	158524983	158525453	True	NM_024007,NM_145049	chr5,chr5	-,+	EBF1,UBLCP1	1391,164635
chr19:22234022-22234500	chr19	+	22234201	22234412	True	NM_007153,NM_033468	chr19,chr19	-,+	ZNF208,ZNF257	-40456,853
chr17:6556268-6557347	chr17	+	6556612	6557298	True	NM_016060,NM_001105520	chr17,chr17	-,+	MED31,C17orf100	-1658,-1610
chr17:45723920-45724358	chr17	+	45724011	45724192	True	NM_002265,NR_033934	chr17,chr17	+,-	KPNB1,MRPL45P2	3082,-154025
chr2:70121097-70121328	chr2	+	70121096	70121382	True	NM_006857,NR_037862,NM_152792	chr2,chr2,chr2	+,+,-	SNRNP27,SNRNP27,ASPRV1	-72,-72,68071
chr9:110251402-110251690	chr9	+	110251552	110251717	True	NM_004235,NM_002874	chr9,chr9	-,+	KLF4,RAD23B	380,-206063
chr13:27827180-27828622	chr13	+	27827315	27828231	True	NM_000982,NR_002574,NM_182488,NR_026911,NR_002575	chr13,chr13,chr13,chr13,chr13	+,+,-,+,+	RPL21,SNORD102,USP12,RPL21P28,SNORA27	-1675,969,-81282,-1674,1306
chr4:2814148-2814520	chr4	+	2814154	2814566	True	NM_001145855,NM_001145856,NM_024309,NM_003023	chr4,chr4,chr4,chr4	+,+,-,+	SH3BP2,SH3BP2,TNIP2,SH3BP2	-259,5345,-56051,5974
chr12:4132907-4133721	chr12	+	4133319	4133593	True	NM_001759,NM_020367	chr12,chr12	+,-	CCND2,PARP11	249308,-150711
chr14:94971828-94972221	chr14	+	94971874	94972110	True	NM_173850,NM_006215	chr14,chr14	-,+	SERPINA12,SERPINA4	12121,55672
chr19:46419911-46421537	chr19	+	46419940	46421316	True	NM_004497,NM_001029861	chr19,chr19	+,-	FOXA3,NANOS2	-52473,-1904
chr22:25354541-25355824	chr22	+	25354982	25355832	True	NM_001145206,NM_001001663	chr22,chr22	+,-	KIAA1671,TMEM211	68108,-19668
chr2:95821990-95822931	chr2	+	95822090	95822924	True	NM_021088,NM_032788,NM_001017396	chr2,chr2,chr2	+,-,+	ZNF2,ZNF514,ZNF2	8258,2389,8258
chr1:78514578-78515879	chr1	+	78514687	78515923	True	NM_003902,NM_017655	chr1,chr1	-,+	FUBP1,GIPC2	-69910,-3163
chr14:90798303-90798529	chr14	+	90798493	90798577	True	NM_199043,NM_017970,NM_006888	chr14,chr14,chr14	-,-,+	C14orf102,C14orf102,CALM1	-214,-214,64749
chr3:128367977-128368968	chr3	+	128368146	128368952	True	NM_004637,NM_002950	chr3,chr3	+,-	RAB7A,RPN1	76026,817
chr2:27298817-27300616	chr2	+	27299071	27300363	True	NM_007046,NM_001134693,NM_000221,NM_006488	chr2,chr2,chr2,chr2	+,-,+,+	EMILIN1,OST4,KHK,KHK	1071,-4504,9247,9247
chr21:18883776-18884660	chr21	+	18884034	18884656	True	NM_001130914,NM_001338	chr21,chr21	-,+	BTG3,CXADR	100666,673
chr17:8113941-8114207	chr17	+	8113948	8114070	True	NM_004217,NR_037447	chr17,chr17	-,+	AURKB,MIR3676	-65,-23506
chr9:65630470-65632016	chr9	+	65630684	65631767	True	NR_024496,NM_015667	chr9,chr9	+,-	LOC442421,FAM75A7	862501,-121074
chr9:65630470-65632016	chr9	-	39105084	39105136	False	NM_033655,NM_001085452	chr9,chr9	-,+	CNTNAP3,FAM75A1	183216,250562
chr9:65630470-65632016	chr9	+	43888762	43889135	False	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	-258032,-204251
chr7:102986871-102988019	chr7	+	102987358	102988006	True	NM_001204453,NM_001129887,NM_002803,NM_014377	chr7,chr7,chr7,chr7	+,-,+,-	PSMC2,DNAJC2,PSMC2,DNAJC2	-13,-2038,-13,-2038
chr19:36360675-36361405	chr19	+	36360748	36361404	True	NM_001024807,NM_004646,NM_005166	chr19,chr19,chr19	+,-,+	APLP1,NPHS1,APLP1	-1398,-17853,-1398
chrX:152012967-152013318	chrX	+	152013097	152013283	True	NM_004344,NM_015922	chrX,chrX	-,+	CETN2,NSDHL	-13796,-13638
chr7:128396917-128398507	chr7	+	128397246	128398358	True	NM_001708,NM_001219	chr7,chr7	-,+	OPN1SW,CALU	17543,-17958
chr4:39043795-39044797	chr4	+	39043878	39044846	True	NM_024943,NM_001171654,NM_001007075	chr4,chr4,chr4	-,+,+	TMEM156,KLHL5,KLHL5	-9837,1604,1604
chr10:47174091-47174440	chr10	+	47174164	47174408	True	NM_001137549,NM_001137548,NM_005972,NM_001137556,NM_001098845,NM_001040084	chr10,chr10,chr10,chr10,chr10,chr10	-,-,+,-,-,-	FAM25G,FAM25C,PPYR1,FAM25B,ANXA8L1,ANXA8	7330,7330,-90681,7330,-124,-42
chr10:47174091-47174440	chr10	-	47746803	47746865	False	NR_024495,NM_001630	chr10,chr10	-,+	LOC642826,ANXA8L2	-503309,54
chr10:47174091-47174440	chr10	-	48254938	48255182	False	NM_001137549,NM_001137548,NM_001137556,NM_001098845,NM_001040084,NM_002900	chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,-	FAM25G,FAM25C,FAM25B,ANXA8L1,ANXA8,RBP3	-7327,-7327,-7327,124,42,135859
chr7:151332755-151333044	chr7	+	151332781	151332937	True	NR_034013,NM_024429	chr7,chr7	+,-	LOC100131176,PRKAG2	-226510,-3437
chr17:57298499-57299123	chr17	+	57298703	57299081	True	NM_182569,NM_182620,NM_001165994,NM_001165993	chr17,chr17,chr17,chr17	+,-,+,+	GDPD1,SKA2,GDPD1,GDPD1	-926,-65903,-926,-926
chr14:100272744-100273304	chr14	+	100272992	100273344	True	NM_004434,NM_001144995	chr14,chr14	+,-	EML1,CCDC85C	-13298,-202265
chr1:114299643-114300725	chr1	+	114300006	114300400	True	NR_037864,NM_006608	chr1,chr1	+,-	LOC100287722,PHTF1	98856,1427
chr4:24796237-24796975	chr4	+	24796419	24797019	True	NM_001130726,NM_003102	chr4,chr4	-,+	CCDC149,SOD3	117631,65
chr10:121578171-121579193	chr10	+	121578198	121579214	True	NM_024834,NR_003252	chr10,chr10	-,+	MCMBP,INPP5F	53230,-95
chr11:1644180-1644556	chr11	+	1644393	1644562	True	NM_001012709,NM_001001480	chr11,chr11	-,+	KRTAP5-4,KRTAP5-5	-1025,6470
chr7:105311652-105312454	chr7	+	105311805	105312459	True	NM_138495,NM_021930	chr7,chr7	-,+	ATXN7L1,RINT1	7200,-139331
chr1:151965089-151965453	chr1	+	151965156	151965503	True	NR_024237,NM_002966	chr1,chr1	+,-	LOC100132111,S100A10	-154262,1262
chr10:124464191-124465176	chr10	+	124464280	124464952	True	NM_001010912,NR_003570	chr10,chr10	-,+	C10orf120,FLJ46361	-4942,51257
chr4:41362826-41363090	chr4	+	41362846	41363030	True	NM_001112717,NM_173075,NM_014988,NM_001112718	chr4,chr4,chr4,chr4	+,-,+,+	LIMCH1,APBB2,LIMCH1,LIMCH1	-93,-146211,-93,-93
chr11:69198736-69200359	chr11	+	69198869	69200243	True	NM_153451,NM_138768	chr11,chr11	-,+	ORAOV1,MYEOV	289972,-137305
chr12:124245612-124245931	chr12	+	124245762	124245967	True	NM_207437,NM_001414	chr12,chr12	+,-	DNAH10,EIF2B1	1074,-127439
chr17:26940688-26941122	chr17	+	26940731	26941051	True	NM_001174103,NM_003170	chr17,chr17	-,+	SGK494,SUPT6H	210,48250
chr1:165326318-165327591	chr1	+	165326400	165327406	True	NM_177398,NM_001174069,NM_001005214	chr1,chr1,chr1	-,-,+	LMX1A,LMX1A,LRRC52	-448,-922,186071
chr11:124542682-124543353	chr11	+	124542795	124543208	True	NM_170601,NM_017425,NM_001199922	chr11,chr11,chr11	-,+,-	SIAE,SPA17,SIAE	620,531,3042
chr6:141184993-141186893	chr6	+	141185005	141186385	True	NR_037441,NM_002511	chr6,chr6	+,-	MIR3668,NMBR	-658677,1223602
chr20:43156108-43157127	chr20	+	43156179	43156569	True	NM_198941,NM_007066,NM_006811,NM_181805,NM_181804	chr20,chr20,chr20,chr20,chr20	-,+,-,+,+	SERINC3,PKIG,SERINC3,PKIG,PKIG	-5453,3866,-5453,3866,3866
chr13:21477248-21477586	chr13	+	21477253	21477495	True	NM_022459,NM_138284	chr13,chr13	-,+	XPO4,IL17D	-340,-199822
chr5:180286168-180286667	chr5	+	180286167	180286703	True	NR_027183,NM_152283,NM_001172638	chr5,chr5,chr5	+,-,-	LOC729678,ZFP62,ZFP62	-29259,1633,1633
chr20:7922002-7923617	chr20	+	7922192	7923320	True	NM_015192,NM_017545	chr20,chr20	+,-	PLCB1,HAO1	189975,-1099
chr17:27504627-27506453	chr17	+	27504642	27506342	True	NM_203318,NM_005208,NM_078471	chr17,chr17,chr17	-,+,-	MYO18A,CRYBA1,MYO18A	1115,67532,1115
chr22:37679385-37680156	chr22	+	37679398	37680042	True	NM_013385,NM_002872	chr22,chr22	+,-	CYTH4,RAC2	-954,-39093
chr2:15729580-15730846	chr2	+	15729603	15730717	True	NM_004939,NM_015909	chr2,chr2	+,-	DDX1,NBAS	1052,-28149
chr19:36053430-36054496	chr19	+	36053625	36054449	True	NM_000704,NM_032635	chr19,chr19	-,+	ATP4A,TMEM147	161,-17131
chr15:64455541-64456086	chr15	+	64455630	64456116	True	NM_024798,NM_000942	chr15,chr15	+,-	SNX22,PPIB	-11765,-276
chr11:65726668-65727189	chr11	+	65726898	65727226	True	NM_031450,NM_005146	chr11,chr11	-,+	C11orf68,SART1	-40367,1933
chr5:180337077-180338423	chr5	+	180337342	180338408	True	NM_001159710,NM_152283	chr5,chr5	+,-	BTNL8,ZFP62	-830,-49056
chr17:31687-32159	chr17	+	31814	32148	True	NM_001013672,NM_003585	chr17,chr17	+,-	C17orf97,DOC2B	227969,-394
chr12:11289635-11291561	chr12	+	11289694	11290630	True	NR_036583,NM_001097643	chr12,chr12	+,-	LOC100129361,TAS2R30	33149,-2851
chrX:150890829-150891113	chrX	+	150890839	150891139	True	NR_029973,NM_033085	chrX,chrX	-,+	MIR452,FATE1	237095,-6382
chr12:76464706-76466610	chr12	+	76465167	76466646	True	NM_004537,NM_006851	chr12,chr12	-,+	NAP1L1,GLIPR1	12149,-590718
chr15:44828386-44828710	chr15	+	44828418	44828670	True	NR_034171,NR_034170,NM_003758	chr15,chr15,chr15	-,-,+	LOC645212,LOC645212,EIF3J	478,501,595
chr17:27373246-27374419	chr17	+	27373341	27374448	True	NM_016518,NM_004740	chr17,chr17	+,-	PIPOX,TIAF1	-3474,28229
chr13:73355472-73355804	chr13	+	73355505	73355803	True	NM_006346,NM_001128226,NM_014953	chr13,chr13,chr13	+,-,-	PIBF1,DIS3,DIS3	426,591,591
chr21:42791563-42792037	chr21	+	42791741	42792017	True	NM_002462,NM_001135099,NM_001178046,NM_001144925	chr21,chr21,chr21,chr21	+,-,+,+	MX1,TMPRSS2,MX1,MX1	5960,88025,6085,502
chr6:39685132-39687017	chr6	+	39685160	39686676	True	NM_145027,NM_001201427	chr6,chr6	-,+	KIF6,DAAM2	6557,73482
chr14:103522501-103522881	chr14	+	103522500	103522711	True	NM_001077594,NM_006035	chr14,chr14	+,-	EXOC3L4,CDC42BPB	43769,1082
chr3:124920338-124921651	chr3	+	124920565	124921475	True	NM_001195483,NR_033437	chr3,chr3	-,+	SLC12A8,UMPS	8824,-471410
chr1:143352683-143353945	chr1	+	143353492	143353900	True	NR_033189,NR_027468	chr1,chr1	+,-	LOC100130000,FLJ39739	333229,390613
chr1:143352683-143353945	chr1	+	142801753	142801803	False	NR_033189,NR_027468	chr1,chr1	+,-	LOC100130000,FLJ39739	885326,942704
chr1:143352683-143353945	chr1	-	143234770	143234820	False	NR_033189,NR_027468	chr1,chr1	+,-	LOC100130000,FLJ39739	452309,509687
chr1:143352683-143353945	chr21	+	9744350	9744759	False	NM_001033515,NR_037421	chr21,chr21	-,+	LOC100132288,MIR3648	223882,81072
chr19:7703018-7704128	chr19	+	7703024	7704173	True	NM_006949,NR_033242,NM_020196,NM_174895,NM_001127396,NM_001171155	chr19,chr19,chr19,chr19,chr19,chr19	+,+,-,-,+,+	STXBP2,LOC100131801,XAB2,PCP2,STXBP2,LOC100131801	-1085,-8405,-8585,-4454,-1085,-8405
chr22:32150169-32150468	chr22	+	32150299	32150519	True	NM_001007188,NM_014662,NM_001136029,NM_173566	chr22,chr22,chr22,chr22	+,+,+,-	DEPDC5,DEPDC5,DEPDC5,PRR14L	-281,-281,333,-4179
chr1:109229946-109230172	chr1	+	109229946	109230019	True	NR_037185,NM_018061,NM_144584	chr1,chr1,chr1	+,+,-	PRPF38B,PRPF38B,HENMT1	4915,4912,-25798
chr12:7812001-7812621	chr12	+	7812001	7812161	True	NM_001644,NM_199286	chr12,chr12	-,+	APOBEC1,DPPA3	6391,51927
chr19:291387-291686	chr19	+	291386	291735	True	NM_003712,NM_177543,NM_001005240,NM_177526	chr19,chr19,chr19,chr19	-,-,+,-	PPAP2C,PPAP2C,OR4F17,PPAP2C	49,-217,-180758,49
chr8:42234572-42236149	chr8	+	42234694	42236072	True	NM_014420,NM_001135694	chr8,chr8	-,+	DKK4,VDAC3	-20,13273
chr19:54977538-54979007	chr19	+	54977683	54979056	True	NM_198988,NM_052925,NM_145057	chr19,chr19,chr19	-,+,-	LENG9,LENG8,CDC42EP5	-2789,-17669,5416
chr17:61907275-61907644	chr17	+	61907381	61907689	True	NM_002805,NM_001199163,NM_017647	chr17,chr17,chr17	+,+,-	PSMC5,PSMC5,FTSJ3	-2662,-2388,-2350
chr19:46010195-46010766	chr19	+	46010334	46010768	True	NM_003370,NM_206900,NM_001080401	chr19,chr19,chr19	+,-,+	VASP,RTN2,PPM1N	55,-10021,-8654
chr1:110163751-110163983	chr1	+	110163792	110163958	True	NM_139156,NM_005272,NM_203404,NM_004037	chr1,chr1,chr1,chr1	+,-,+,+	AMPD2,GNAT2,AMPD2,AMPD2	-1384,-8087,4090,-567
chr8:23338179-23338467	chr8	+	23338185	23338395	True	NM_016612,NM_001128930	chr8,chr8	+,-	SLC25A37,ENTPD4	47967,-22941
chr20:29612253-29612529	chr20	+	29612288	29612576	True	NM_001037731,NR_003579	chr20,chr20	-,+	DEFB116,FRG1B	283862,-460
chrX:139114858-139116568	chrX	+	139115079	139116424	True	NM_001013403,NM_000133	chrX,chrX	-,+	CXorf66,F9	-67402,-502242
chr10:103578244-103578447	chr10	+	103578297	103578379	True	NR_036114,NM_012215,NM_001142434	chr10,chr10,chr10	+,-,-	MIR3158-1,MGEA5,MGEA5	-217174,-75,-75
chr19:48405228-48405988	chr19	+	48405430	48405989	True	NM_003167,NR_004437,NR_024216	chr19,chr19,chr19	-,+,+	SULT2A1,SNAR-A12,SNAR-A13	-15776,4945,4945
chr3:5020222-5020499	chr3	+	5020229	5020547	True	NR_037903,NM_003670	chr3,chr3	-,+	LOC100507582,BHLHE40	-72043,549
chr1:23884985-23885491	chr1	+	23885157	23885525	True	NM_002167,NR_027042	chr1,chr1	-,+	ID3,MDS2	847,68298
chr6:41041326-41041547	chr6	+	41041404	41041596	True	NM_021705,NM_145063,NM_002505	chr6,chr6,chr6	+,-,+	NFYA,C6orf130,NFYA	-748,-1216,-748
chr11:118957087-118959031	chr11	+	118957621	118958932	True	NM_000190,NM_001024382,NM_002105	chr11,chr11,chr11	+,+,-	HMBS,HMBS,H2AFX	-2087,157,7295
chr5:145317058-145317274	chr5	+	145317142	145317310	True	NM_152550,NM_001080516	chr5,chr5	+,-	SH3RF2,GRXCR2	-1067,-64611
chr7:53878138-53879626	chr7	+	53878273	53879636	True	NM_182546,NR_004422	chr7,chr7	+,-	VSTM2A,HPVC1	730382,390528
chrX:2923709-2924398	chrX	+	2923769	2924100	True	NM_000047,NM_001011719	chrX,chrX	-,+	ARSE,ARSH	-41275,553
chrX:52857356-52859123	chrX	+	52857661	52858680	True	NM_130775,NM_001009616	chrX,chrX	+,-	XAGE5,SPANXN5	-16485,-31273
chr16:30241878-30243329	chr16	+	30242524	30242599	True	NR_002555,NM_177552	chr16,chr16	-,+	LOC613037,SULT1A3	14386,-32030
chr16:30241878-30243329	chr16	+	29502551	29502626	False	NR_002557,NM_177552	chr16,chr16	-,+	LOC613038,SULT1A3	-23652,-31399
chr16:30241878-30243329	chr16	-	22539455	22539530	False	NM_001135865,NR_027460	chr16,chr16	+,-	LOC100132247,RRN3P3	-14665,-90419
chr16:30241878-30243329	chr16	+	21422018	21422093	False	NR_026675,NM_130464	chr16,chr16	+,-	NCRNA00169,NPIPL3	-109903,14618
chr16:30241878-30243329	chr16	+	21854470	21854545	False	NM_003366,NR_003370	chr16,chr16	+,-	UQCRC2,RRN3P1	110063,-23975
chr17:1397135-1397663	chr17	+	1397166	1397682	True	NM_001080779,NM_001080950,NR_028514,NM_033375	chr17,chr17,chr17,chr17	-,-,+,-	MYO1C,MYO1C,LOC100306951,MYO1C	-1165,-8115,22530,-2194
chr4:165865286-165865837	chr4	+	165865339	165865821	True	NM_153027,NM_001012414	chr4,chr4	+,-	C4orf39,TRIM61	12278,33055
chr12:103293559-103294092	chr12	+	103293694	103293772	True	NM_000277,NM_004316	chr12,chr12	-,+	PAH,ASCL1	17659,57679
chr1:9709082-9709447	chr1	+	9709195	9709301	True	NR_027045,NM_005026	chr1,chr1	-,+	C1orf200,PIK3CD	5393,2488
chr10:124547187-124547981	chr10	+	124547196	124547966	True	NM_022034,NR_003570	chr10,chr10	-,+	CUZD1,FLJ46361	57775,-31037
chr1:87184021-87185398	chr1	+	87184261	87185305	True	NM_016009,NM_004261	chr1,chr1	+,-	SH3GLB1,SEP15	-14055,194852
chr10:28964759-28965388	chr10	+	28964890	28965427	True	NR_033805,NM_012342	chr10,chr10	-,+	LOC220906,BAMBI	-143607,996
chr4:86987878-86988592	chr4	+	86987938	86988129	True	NM_031305,NM_138981	chr4,chr4	+,-	ARHGAP24,MAPK10	-136574,40736
chr19:291913-292246	chr19	+	291964	292202	True	NM_003712,NM_177543,NM_001005240,NM_177526	chr19,chr19,chr19,chr19	-,-,+,-	PPAP2C,PPAP2C,OR4F17,PPAP2C	-529,-795,-181336,-529
chr5:177305077-177305545	chr5	+	177305317	177305566	True	NR_003615,NM_173663	chr5,chr5	+,-	LOC728554,FAM153A	-3116,-97812
chr5:177305077-177305545	chr5	-	175392236	175392287	False	NM_032361,NM_001008220	chr5,chr5	-,+	THOC3,CPLX2	3309,-93787
chr11:46954839-46956436	chr11	+	46955056	46956282	True	NM_024113,NM_001003677,NM_001003676,NM_001003678,NM_002334	chr11,chr11,chr11,chr11,chr11	+,+,+,+,-	C11orf49,C11orf49,C11orf49,C11orf49,LRP4	1968,1968,1968,1968,-14883
chr22:35586742-35587945	chr22	+	35586745	35587719	True	NM_001003681,NM_005368	chr22,chr22	+,-	HMGXB4,MB	65725,425715
chr12:55025461-55027058	chr12	+	55025487	55026823	True	NM_001165975,NM_033277	chr12,chr12	+,-	PDE1B,LACRT	-70440,1896
chr11:46382723-46383188	chr11	+	46382747	46383096	True	NM_000741,NM_001105540	chr11,chr11	-,+	CHRM4,DGKZ	25061,48
chr3:128598611-128598820	chr3	+	128598615	128598835	True	NR_034179,NM_014049,NR_033426	chr3,chr3,chr3	-,+,+	LOC653712,ACAD9,ACAD9	-8231,-333,-333
chr6:43135871-43137205	chr6	+	43135980	43137153	True	NM_006443,NM_003131	chr6,chr6	-,+	C6orf108,SRF	60108,1766
chr21:47474150-47475185	chr21	+	47474381	47475205	True	NM_058174,NM_006657	chr21,chr21	+,-	COL6A2,FTCD	42827,100326
chr5:180687825-180688192	chr5	+	180687885	180688223	True	NM_201627	chr5	+	TRIM41	-37630
chr6:36802286-36802732	chr6	+	36802442	36802621	True	NM_020939,NM_152734	chr6,chr6	-,+	CPNE5,C6orf89	4650,51018
chr22:35844150-35844537	chr22	+	35844184	35844312	True	NM_005368,NM_006739	chr22,chr22	-,+	MB,MCM5	169122,-48119
chr19:11348861-11349118	chr19	+	11348881	11349167	True	NM_020812,NM_018687	chr19,chr19	-,+	DOCK6,LOC55908	24040,1127
chr1:6686760-6688288	chr1	+	6686929	6688097	True	NM_014851,NM_001195752,NM_001195753,NM_138350	chr1,chr1,chr1,chr1	-,+,+,+	KLHL21,THAP3,THAP3,THAP3	-24000,-1770,-2055,-1770
chr13:31531081-31532899	chr13	+	31531251	31532947	True	NM_152325,NM_006644	chr13,chr13	+,-	C13orf26,HSPH1	-24468,203220
chr10:1205473-1205690	chr10	+	1205501	1205727	True	NR_015376,NM_004508	chr10,chr10	+,-	NCRNA00200,IDI1	-20,-110440
chr18:55712627-55713478	chr18	+	55712674	55713378	True	NM_001144967,NM_015277,NM_001144964,NM_005603	chr18,chr18,chr18,chr18	+,+,+,-	NEDD4L,NEDD4L,NEDD4L,ATP8B1	-1106,-1106,1079,-242347
chrX:141295785-141296087	chrX	+	141296010	141296126	True	NM_005462,NM_016249	chrX,chrX	+,-	MAGEC1,MAGEC2	-304420,-2934
chr8:146216444-146217666	chr8	+	146216675	146217495	True	NR_002807,NR_023392	chr8,chr8	+,-	TMED10P1,ZNF252	2755,10848
chr8:145113219-145113554	chr8	+	145113250	145113548	True	NM_019037,NM_017570	chr8,chr8	+,-	EXOSC4,OPLAH	19973,2086
chrX:120337922-120338426	chrX	+	120337934	120338440	True	NM_001080146,NM_012084	chrX,chrX	-,+	CT47A1,GLUD2	-218296,-156523
chr22:50052405-50052703	chr22	+	50052446	50052734	True	NR_026997,NM_014838	chr22,chr22	-,+	C22orf34,ZBED4	-1256,194762
chr12:31078238-31078800	chr12	+	31078292	31078742	True	NM_032156,NM_001080509	chr12,chr12	-,+	CAPRIN2,TSPAN11	-170844,1095
chr1:234617226-234617728	chr1	+	234617558	234617768	True	NM_001012985,NM_005646	chr1,chr1	+,-	C1orf31,TARBP1	-108180,-2709
chr16:31486014-31487517	chr16	+	31486049	31487274	True	NM_022744,NM_001042454,NM_001136509,NM_001164719,NM_015927,NM_003041	chr16,chr16,chr16,chr16,chr16,chr16	-,+,-,+,+,+	C16orf58,TGFB1I1,ZNF843,TGFB1I1,TGFB1I1,SLC5A2	32482,-2624,-31701,-2571,-1574,7164
chr17:1420967-1421515	chr17	+	1421051	1421531	True	NM_130766,NM_016532,NM_001135642,NR_028514	chr17,chr17,chr17,chr17	-,-,-,+	INPP5K,INPP5K,INPP5K,LOC100306951	-869,-869,-869,-889
chr2:86090311-86091122	chr2	+	86090318	86090798	True	NM_032827,NM_001042437	chr2,chr2	+,-	ATOH8,ST3GAL5	-109460,4045
chr11:5705402-5706399	chr11	+	5705427	5706271	True	NM_033092,NM_033093,NM_033034,NM_006074,NM_001199573	chr11,chr11,chr11,chr11,chr11	-,-,-,+,+	TRIM5,TRIM5,TRIM5,TRIM22,TRIM22	118,118,118,4545,4545
chr1:11995977-11996532	chr1	+	11996284	11996575	True	NM_000302,NM_138346	chr1,chr1	+,-	PLOD1,KIAA2013	-1611,-9799
chr21:37433104-37433354	chr21	+	37433252	37433396	True	NM_017438,NM_001007259,NM_001757	chr21,chr21,chr21	-,-,+	SETD4,SETD4,CBR1	-436,-641,8888
chr5:139938199-139939826	chr5	+	139938487	139939675	True	NM_133172,NM_001035235,NM_133174,NM_133173,NM_080670,NM_006051	chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,+,-	APBB3,SRA1,APBB3,APBB3,SLC35A4,APBB3	4564,-809,4564,4564,4744,4564
chr10:102987639-102987915	chr10	+	102987642	102987910	True	NM_006562,NR_029380	chr10,chr10	-,+	LBX1,FLJ41350	857,1440
chr8:21997852-21998417	chr8	+	21997911	21998353	True	NM_005144,NM_001172357,NM_018411,NM_025232	chr8,chr8,chr8,chr8	-,+,-,-	HR,SFTPC,HR,REEP4	-9346,20830,-9346,1145
chr11:125365573-125365933	chr11	+	125365736	125365888	True	NM_005103,NM_001007277,NM_022549	chr11,chr11,chr11	-,+,-	FEZ1,EI24,FEZ1	368,73409,368
chr15:41186688-41186904	chr15	+	41186731	41186867	True	NM_020857,NM_133639	chr15,chr15	+,-	VPS18,RHOV	-154,-20244
chr20:62129847-62130153	chr20	+	62129933	62130017	True	NM_024299,NM_001958	chr20,chr20	+,-	PPDPF,EEF1A2	22115,538
chr13:43565123-43565512	chr13	+	43565159	43565414	True	NM_001002264,NM_013238,NM_033255	chr13,chr13,chr13	-,+,-	EPSTI1,DNAJC15,EPSTI1	1018,31947,1018
chr15:69854564-69855108	chr15	+	69854567	69855033	True	NR_026979,NR_030714	chr15,chr15	+,-	LOC145837,MIR629	-559,516825
chr22:39353934-39355714	chr22	+	39354081	39355643	True	NM_014292,NM_001193289,NM_145699	chr22,chr22,chr22	-,+,+	CBX6,APOBEC3A,APOBEC3A	-85823,-611,-611
chr7:112160327-112161077	chr7	+	112160341	112160983	True	NM_182597,NM_022484	chr7,chr7	+,-	C7orf53,TMEM168	-39326,269545
chr19:21018213-21018521	chr19	+	21018212	21018341	True	NR_034060,NM_145297	chr19,chr19	+,-	ZNF85,ZNF626	87717,-173810
chr5:131706762-131707757	chr5	+	131707025	131707653	True	NM_003060,NR_037500,NR_037898	chr5,chr5,chr5	+,-,-	SLC22A5,MIR3936,LOC553103	-1675,-5734,-1417
chr16:67681063-67681764	chr16	+	67681194	67681628	True	NM_001013838,NM_001082486	chr16,chr16	+,-	RLTPR,ACD	-2215,13140
chr3:27408393-27409503	chr3	+	27408803	27409510	True	NM_052953,NM_199347	chr3,chr3	+,-	LRRC3B,NEK10	-744555,1452
chr17:56564480-56564786	chr17	+	56564553	56564729	True	NM_001080439,NM_002876	chr17,chr17	-,+	HSF5,RAD51C	1080,205233
chr6:119671467-119672587	chr6	+	119671526	119672314	True	NM_005907,NM_014034	chr6,chr6	-,+	MAN1A1,ASF1A	-600,-456343
chr9:95241099-95241533	chr9	+	95241215	95241415	True	NM_001193335,NM_017680,NR_036505	chr9,chr9,chr9	-,-,+	ASPN,ASPN,LOC100128361	3479,3479,138916
chr11:10471412-10472068	chr11	+	10471519	10471999	True	NM_001025389,NM_001172431,NM_001190702,NM_001025390,NM_000480	chr11,chr11,chr11,chr11,chr11	+,+,-,+,+	AMPD3,AMPD3,MTRNR2L8,AMPD3,AMPD3	4666,-10,58774,5481,224
chr14:52736108-52736985	chr14	+	52736120	52736899	True	NM_007361,NM_000953	chr14,chr14	-,+	NID2,PTGDR	-200174,-1751
chr18:32398244-32399292	chr18	+	32398272	32399335	True	NM_001198944,NM_001198942,NM_001198943,NM_001112734,NM_032981,NM_032980	chr18,chr18,chr18,chr18,chr18,chr18	+,+,+,-,+,+	DTNA,DTNA,DTNA,ZSCAN30,DTNA,DTNA	-76,-76,-397,470918,-21,-21
chr2:97757344-97759302	chr2	+	97757484	97759046	True	NM_199336,NM_001164315	chr2,chr2	-,+	FAHD2B,ANKRD36	1586,20186
chr2:97757344-97759302	chr2	-	96070686	96070757	False	NM_001164464,NM_016044	chr2,chr2	-,+	TRIM43B,FAHD2A	79793,-2310
chr2:97757344-97759302	chr2	-	96678855	96678926	False	NM_207328,NR_003698	chr2,chr2	-,+	GPAT2,LOC729234	21872,-2628
chr17:33415820-33416078	chr17	+	33415819	33415929	True	NM_017559,NR_037713	chr17,chr17	+,-	FNDC8,RFFL	32701,469
chr1:79081387-79083366	chr1	+	79081728	79083402	True	NM_022159,NM_006820	chr1,chr1	-,+	ELTD1,IFI44L	389143,2685
chr19:44764291-44764835	chr19	+	44764318	44764810	True	NM_004234,NM_181756	chr19,chr19	-,+	ZNF235,ZNF233	44419,-293
chr3:148803958-148804219	chr3	+	148803957	148804145	True	NM_032383,NM_139048,NM_003071	chr3,chr3,chr3	+,-,-	HPS3,HLTF,HLTF	43225,246,246
chr3:133966267-133967079	chr3	+	133966716	133967052	True	NM_002958,NM_001042383,NM_001005861	chr3,chr3,chr3	-,+,-	RYK,CEP63,RYK	2584,237522,2584
chr1:27531631-27532190	chr1	+	27531646	27531968	True	NM_015023,NM_003047	chr1,chr1	+,-	WDTC1,SLC9A1	29038,-50195
chr16:21722880-21724442	chr16	+	21723086	21724258	True	NM_170664,NM_005849	chr16,chr16	+,-	OTOA,IGSF6	-6853,-59114
chr3:39425888-39426383	chr3	+	39426017	39426218	True	NM_001171174,NM_017875	chr3,chr3	-,+	CX3CR1,SLC25A38	-102791,-1253
chr11:71826197-71827633	chr11	+	71826245	71827591	True	NM_014042,NM_000804	chr11,chr11	-,+	C11orf51,FOLR3	-2423,19179
chr17:27921700-27922036	chr17	+	27921799	27922033	True	NM_014030,NM_001085454,NM_152345	chr17,chr17,chr17	-,-,+	GIT1,GIT1,ANKRD13B	-5189,-5189,-1323
chr11:62458042-62458583	chr11	+	62458274	62458624	True	NM_203422,NM_012202	chr11,chr11	-,+	LRRN4CL,GNG3	-903,16489
chr12:32664529-32664789	chr12	+	32664528	32664825	True	NM_001040436,NM_139241	chr12,chr12	-,+	YARS2,FGD4	244113,-9545
chr5:39219324-39219696	chr5	+	39219338	39219678	True	NM_199335,NM_001465,NM_003999	chr5,chr5,chr5	-,-,+	FYB,FYB,OSMR	39,39,-373289
chr1:12919350-12920529	chr1	+	12919486	12920572	True	NM_001013631,NM_023014	chr1,chr1	-,+	HNRNPCL1,PRAMEF2	-10908,-2596
chr6:41243960-41244638	chr6	+	41243992	41244650	True	NR_002794,NM_018643	chr6,chr6	+,-	TREML2P1,TREM1	-26928,9857
chr11:62750052-62750607	chr11	+	62750055	62750515	True	NR_037193,NM_153278,NM_153277,NM_153276,NM_004790	chr11,chr11,chr11,chr11,chr11	+,-,-,-,-	SLC3A2,SLC22A6,SLC22A6,SLC22A6,SLC22A6	-100935,2004,2004,2004,2004
chr16:58283869-58284071	chr16	+	58283905	58283975	True	NM_014157,NM_001142302,NM_001080492	chr16,chr16,chr16	+,+,-	CCDC113,CCDC113,PRSS54	-116,-116,45026
chr3:196064088-196064893	chr3	+	196064136	196064892	True	NM_138461,NM_001204898,NM_152672,NM_001204897,NR_037950	chr3,chr3,chr3,chr3,chr3	-,-,+,-,-	TM4SF19,TM4SF19,OSTalpha,TM4SF19,TM4SF19-TCTEX1D2	449,449,-120811,449,449
chr5:96078408-96079112	chr5	+	96078417	96079001	True	NR_033798,NM_016442	chr5,chr5	+,-	CAST,ERAP1	242,64941
chr1:27929998-27930686	chr1	+	27930045	27930695	True	NM_001029882,NM_001143912	chr1,chr1	-,+	AHDC1,FAM76A	86,121794
chr4:143771639-143773566	chr4	+	143771712	143773572	True	NM_001101669,NM_032557,NM_003866	chr4,chr4,chr4	-,+,-	INPP4B,USP38,INPP4B	-4108,332497,-4108
chr2:238972583-238974406	chr2	+	238972811	238974228	True	NM_016510,NM_030768	chr2,chr2	+,-	SCLY,ILKAP	-3298,138157
chr5:54274521-54275153	chr5	+	54274523	54275188	True	NM_002104,NM_007036,NM_001135604	chr5,chr5,chr5	+,-,-	GZMK,ESM1,ESM1	44918,6276,6276
chr2:219647834-219648144	chr2	+	219648073	219648193	True	NM_000784,NM_017431	chr2,chr2	+,-	CYP27A1,PRKAG3	-1659,48369
chrX:153534378-153535147	chrX	+	153534669	153534932	True	NM_001205201,NM_001145934	chrX,chrX	-,+	TEX28,TKTL1	-11105,-1311
chr12:57999684-58000750	chr12	+	57999729	58000741	True	NM_001111270,NM_182947,NM_178502,NM_001478	chr12,chr12,chr12,chr12	+,+,+,-	ARHGEF25,ARHGEF25,DTX3,B4GALNT1	3221,4476,-1176,26294
chr15:25439576-25440332	chr15	+	25439721	25440217	True	NR_003344,NR_003358,NR_003311,NR_003310,NM_130838,NR_003297,NR_003308,NR_003309,NR_003351,NR_003301,NR_003302,NR_003303,NR_003304,NR_003305,NR_003306	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,-,+,+,+,+,+,+,+,+,+,+	SNORD115-29,SNORD115-43,SNORD115-19,SNORD115-18,UBE3A,SNORD115-5,SNORD115-16,SNORD115-17,SNORD115-36,SNORD115-9,SNORD115-10,SNORD115-11,SNORD115-12,SNORD115-13,SNORD115-14	-5211,-5211,6252,6252,210486,-3206,4377,6252,-5211,-3209,-3209,-5211,-3209,-1304,-42
chr11:46381461-46382258	chr11	+	46381485	46381945	True	NM_000741,NM_001105540	chr11,chr11	-,+	CHRM4,DGKZ	26213,1199
chr17:40073250-40074417	chr17	+	40073411	40074257	True	NM_031421,NM_198830,NM_001096	chr17,chr17,chr17	+,-,-	TTC25,ACLY,ACLY	12630,1065,1065
chr9:90631310-90631619	chr9	+	90631523	90631635	True	NM_178432,NM_001145124	chr9,chr9	-,+	CDK20,FAM75C1	-41828,-98697
chr21:38736650-38738263	chr21	+	38736667	38738035	True	NM_101395,NM_006052	chr21,chr21	+,-	DYRK1A,DSCR3	1823,-96834
chr7:76139346-76139688	chr7	+	76139346	76139648	True	NM_030570,NR_003262,NM_182684	chr7,chr7,chr7	+,-,+	UPK3B,FDPSL2A,UPK3B	96,-35029,96
chr4:125632401-125633045	chr4	+	125632502	125633077	True	NM_020337,NM_024582,NM_001167882	chr4,chr4,chr4	-,+,-	ANKRD50,FAT4,ANKRD50	860,604489,860
chr12:15930363-15932003	chr12	+	15930413	15931835	True	NM_004447,NM_007178	chr12,chr12	-,+	EPS8,STRAP	10738,103452
chrX:69266345-69267532	chrX	+	69266633	69267573	True	NM_001002254,NM_207320	chrX,chrX	-,+	AWAT2,OTUD6A	2265,14767
chr16:53079605-53080390	chr16	+	53079617	53080281	True	NR_033920,NM_025134	chr16,chr16	-,+	LOC643714,CHD9	-438730,8663
chr16:90076612-90077111	chr16	+	90077025	90077092	True	NM_001042610,NM_024043,NR_023348	chr16,chr16,chr16	-,-,+	DBNDD1,DBNDD1,GAS8	8902,-496,11915
chr8:53853150-53853466	chr8	+	53853157	53853457	True	NM_014781,NM_005285	chr8,chr8	-,+	RB1CC1,NPBWR1	-226131,-740
chr6:119251570-119253233	chr6	+	119251595	119253260	True	NM_017696,NM_153255,NM_014034	chr6,chr6,chr6	-,-,+	MCM9,MCM9,ASF1A	59,3117,-36412
chr17:4851312-4851519	chr17	+	4851374	4851454	True	NM_001165418,NM_053013,NM_005022,NM_001165417,NM_003562,NM_001976,NM_001193503,NM_015528	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,-,-,-,+,+,+	SLC25A11,ENO3,PFN1,SLC25A11,SLC25A11,ENO3,ENO3,RNF167	-7912,2929,421,-7912,-7912,2929,2929,-7795
chr16:61088116-61089017	chr16	+	61088438	61088879	True	NM_001796,NM_024860	chr16,chr16	-,+	CDH8,SETD6	981920,-2539106
chr11:61734746-61735018	chr11	+	61734755	61734819	True	NM_004183,NM_002032	chr11,chr11	+,-	BEST1,FTH1	-17450,363
chr16:66949980-66951515	chr16	+	66950231	66951451	True	NM_003869,NM_001204746,NM_001204744,NM_001204745,NM_001128850,NM_004165,NM_004062	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,-,-,-,-	CES2,CDH16,CDH16,CDH16,RRAD,RRAD,CDH16	16895,1488,1488,1488,8040,8040,1488
chr3:12527010-12528277	chr3	+	12527036	12528134	True	NM_001195279,NM_025265,NM_001145393,NM_001145392,NM_001145395,NM_001145394	chr3,chr3,chr3,chr3,chr3,chr3	-,+,+,+,+,+	LOC100129480,TSEN2,TSEN2,TSEN2,TSEN2,TSEN2	58879,-1084,-1163,-1084,-1084,-1163
chr1:231296269-231296605	chr1	+	231296466	231296592	True	NM_152379,NM_001004342	chr1,chr1	-,+	C1orf131,TRIM67	80382,2081
chrY:6110712-6111355	chrY	+	6110722	6111392	True	NM_022573,NR_001540,NR_003593	chrY,chrY,chrY	+,-,-	TSPY2,TTTY23,TTTY23B	2871,309,309
chrY:6110712-6111355	chrY	-	9748665	9749335	False	NR_001540,NR_003593,NR_003589	chrY,chrY,chrY	+,+,-	TTTY23,TTTY23B,TTTY1B	-309,-309,-136737
chr20:60983003-60983204	chr20	+	60983031	60983253	True	NM_001024,NM_031215	chr20,chr20	+,-	RPS21,CABLES2	-20961,-692
chr16:19474685-19475411	chr16	+	19474789	19475319	True	NM_024780,NM_016641	chr16,chr16	+,-	TMC5,GDE1	-7068,58181
chr10:61662451-61663261	chr10	+	61662592	61663129	True	NM_005436,NM_001143774	chr10,chr10	-,+	CCDC6,PHYHIPL	3338,-725425
chr8:21998417-21998927	chr8	+	21998435	21998855	True	NM_005144,NM_001172357,NM_018411,NM_025232	chr8,chr8,chr8,chr8	-,+,-,-	HR,SFTPC,HR,REEP4	-9870,20328,-9870,643
chr17:4809128-4810573	chr17	+	4809184	4810585	True	NM_000080,NM_001145536	chr17,chr17	-,+	CHRNE,C17orf107	-2815,-6287
chr12:122109234-122109507	chr12	+	122109412	122109482	True	NM_001080825,NM_173855	chr12,chr12	+,-	TMEM120B,MORN3	41175,-1852
chr5:11878717-11880211	chr5	+	11878735	11880222	True	NM_001332,NR_033383	chr5,chr5	-,+	CTNND2,TAG	23943,694746
chr11:17097788-17098942	chr11	+	17098328	17098896	True	NM_005013,NM_001017	chr11,chr11	+,-	NUCB2,RPS13	199389,374
chr2:210866532-210867266	chr2	+	210866625	210867149	True	NM_152519,NM_006916,NM_199229	chr2,chr2,chr2	-,+,+	C2orf67,RPE,RPE	168952,202,231
chr16:638448-638659	chr16	+	638534	638678	True	NM_001172665,NM_001172664,NM_001172666,NM_001040160,NM_001172663,NM_021168	chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,-,+,+	RAB40C,RAB40C,RAB40C,C16orf13,RAB40C,RAB40C	1398,990,1398,47719,678,1494
chr17:14203035-14203255	chr17	+	14203085	14203171	True	NR_026880,NM_006041,NM_001007530	chr17,chr17,chr17	+,+,-	MGC12916,HS3ST3B1,CDRT15	3885,1334,-62935
chr11:63276387-63276602	chr11	+	63276424	63276596	True	NM_001142536,NM_001142537,NM_001142535,NM_033101,NM_001142538,NM_054108	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,-	LGALS12,LGALS12,LGALS12,LGALS12,LGALS12,HRASLS5	-2951,-1016,-2951,-2951,-1016,-17744
chr22:45680887-45681785	chr22	+	45681056	45681784	True	NM_006953,NM_001009880,NM_001167574	chr22,chr22,chr22	+,-,+	UPK3A,KIAA0930,UPK3A	-241,-44406,-241
chr6:1612307-1613846	chr6	+	1612316	1613799	True	NM_001453,NR_027116	chr6,chr6	+,-	FOXC1,LOC285768	-1686,-510749
chr3:152880426-152881049	chr3	+	152880552	152880976	True	NM_002886,NM_001123228	chr3,chr3	+,-	RAP2B,TMEM14E	-574,-821773
chr11:1686845-1687078	chr11	+	1686958	1687124	True	NR_026642,NR_026643	chr11,chr11	-,+	FAM99B,FAM99A	19785,-180
chr11:1686845-1687078	chr11	-	1706537	1706703	False	NR_026642,NM_001012416	chr11,chr11	-,+	FAM99B,KRTAP5-6	206,11721
chr1:89643483-89645302	chr1	+	89643482	89645318	True	NM_198460,NM_207398	chr1,chr1	+,-	GBP6,GBP7	184117,-1759
chr10:134757675-134758225	chr10	+	134757769	134758215	True	NM_173572,NM_001083909	chr10,chr10	-,+	C10orf93,GPR123	-1680,143193
chr16:2932630-2932973	chr16	+	2932675	2932899	True	NM_001142499,NM_138439,NM_022119,NM_001142500	chr16,chr16,chr16,chr16	+,+,-,+	FLYWCH2,FLYWCH2,PRSS22,FLYWCH2	296,296,-24504,296
chr12:110504415-110505474	chr12	+	110504661	110505405	True	NM_207435,NM_031473	chr12,chr12	-,+	C12orf76,IFT81	145,56734
chr3:133291113-133291923	chr3	+	133291323	133291939	True	NM_017548,NM_001134422,NM_001134423,NM_007027	chr3,chr3,chr3,chr3	+,+,+,-	CDV3,CDV3,CDV3,TOPBP1	494,494,1361,88849
chr12:66397397-66398261	chr12	+	66397599	66398081	True	NM_032338,NM_003483	chr12,chr12	-,+	LLPH,HMGA2	126510,-179419
chr12:48920485-48921200	chr12	+	48920670	48921161	True	NM_001005203,NM_002289	chr12,chr12	+,-	OR8S1,LALBA	-1313,42719
chr11:66382769-66383152	chr11	+	66382774	66383056	True	NM_018219,NM_001198845,NM_006328,NM_001198846,NM_001198836,NM_001198837	chr11,chr11,chr11,chr11,chr11,chr11	-,+,+,+,+,+	CCDC87,RBM14-RBM4,RBM14,RBM14-RBM4,RBM14,RBM14	-22220,996,996,996,996,996
chrX:52546007-52546289	chrX	+	52546086	52546298	True	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,-,-,-,-,-,-,-,-,-,-	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	-42,-98,-98,-37,-98,-98,-98,-42,-37,-42,-37,-37,-37,-42,-42
chrX:52546007-52546289	chrX	-	52511659	52511871	False	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,+,+,+,+,+,+,+,+,+,+	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	42,98,98,37,98,98,98,42,37,42,37,37,37,42,42
chrX:52546007-52546289	chrX	+	52533192	52533404	False	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,-,-,-,-,-,-,-,-,-,-	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	-42,-98,-98,-37,-98,-98,-98,-42,-37,-42,-37,-37,-37,-42,-42
chrX:52546007-52546289	chrX	-	52238708	52238920	False	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,+,+,+,+,+,+,+,+,+,+	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	42,98,98,37,98,98,98,42,37,42,37,37,37,42,42
chrX:52546007-52546289	chrX	+	52260252	52260464	False	NM_133430,NR_033251,NR_033253,NM_020411,NR_033254,NR_033257,NR_033256,NM_001097605,NM_001097604,NM_001097593,NM_001097592,NM_001097594,NM_001097597,NM_001097596,NM_001097598	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,-,-,-,-,-,-,-,-,-,-	XAGE1D,XAGE1C,XAGE1A,XAGE1D,XAGE1B,XAGE1E,XAGE1D,XAGE1E,XAGE1E,XAGE1A,XAGE1A,XAGE1B,XAGE1C,XAGE1B,XAGE1C	-42,-98,-98,-37,-98,-98,-98,-42,-37,-42,-37,-37,-37,-42,-42
chr4:124594354-124595806	chr4	+	124594491	124595821	True	NM_198041,NR_027105	chr4,chr4	-,+	NUDT6,LOC285419	-750368,-20602
chr2:218986107-218986374	chr11	-	93851900	93851954	False	NM_015368,NM_001144871	chr11,chr11	+,-	PANX1,C11orf90	10139,-268232
chr2:218986107-218986374	chr2	+	218986163	218986223	True	NM_000634,NM_001557,NM_001168298	chr2,chr2,chr2	-,+,+	CXCR1,CXCR2,CXCR2	45543,4512,3789
chr1:109146843-109147438	chr1	+	109146935	109147387	True	NM_001010883,NM_001102592	chr1,chr1	+,-	FAM102B,HENMT1	-44016,56411
chr2:171924556-171925840	chr2	+	171925075	171925892	True	NM_015530,NM_001136555	chr2,chr2	+,-	GORASP2,TLK1	-140097,-1592
chr19:15488927-15489175	chr19	+	15488952	15489188	True	NM_005858,NR_031716	chr19,chr19	-,+	AKAP8,MIR1470	1465,71170
chr16:11944840-11945163	chr16	+	11944867	11945065	True	NM_015659,NM_001192	chr16,chr16	-,+	RSL1D1,TNFRSF17	427,113898
chr20:37556435-37558042	chr20	+	37556556	37557928	True	NM_030919,NR_027124	chr20,chr20	+,-	FAM83D,LOC339568	-1652,295513
chr11:3692216-3692530	chr11	+	3692280	3692506	True	NM_004314,NM_020402	chr11,chr11	+,-	ART1,CHRNA10	-25970,158
chr5:156711855-156712984	chr5	+	156711870	156712986	True	NM_001001343,NM_014376	chr5,chr5	-,+	FNDC9,CYFIP2	59793,-15572
chr12:117012839-117013702	chr12	+	117013119	117013673	True	NM_001085481,NM_024738	chr12,chr12	+,-	MAP1LC3B2,C12orf49	-15984,162220
chr2:121011153-121011588	chr2	+	121011260	121011606	True	NM_002881,NR_000034	chr2,chr2	+,-	RALB,TMEM185B	-898,-30276
chr10:82117190-82117402	chr10	+	82117227	82117393	True	NM_138812,NM_032372	chr10,chr10	-,+	DYDC1,DYDC2	-727,-720
chr16:87527177-87527399	chr16	+	87527232	87527320	True	NM_022818,NM_015144	chr16,chr16	+,-	MAP1LC3B,ZCCHC14	-101482,-1772
chr8:75902321-75904054	chr8	+	75902598	75903810	True	NM_031461,NM_020647	chr8,chr8	+,-	CRISPLD1,JPH1	-5943,-669036
chr7:27159881-27160565	chr7	+	27160182	27160603	True	NM_030661,NM_153631,NM_002141,NR_002795	chr7,chr7,chr7,chr7	-,-,-,+	HOXA3,HOXA3,HOXA4,HOXA11-AS1	-968,6086,9846,64423
chr1:155716691-155717159	chr1	+	155716769	155717131	True	NM_139118,NR_024117	chr1,chr1	-,+	YY1AP1,MSTO2P	-57946,-1211
chr1:155716691-155717159	chr1	+	155581189	155581551	False	NM_018116,NM_018489	chr1,chr1	+,-	MSTO1,ASH1L	-1233,-48865
chr9:36572896-36573661	chr9	+	36572901	36573460	True	NM_014791,NM_194330	chr9,chr9	+,-	MELK,RNF38	-47,-171706
chr16:4464495-4464814	chr16	+	4464513	4464857	True	NM_001201473,NM_001201472,NM_001201479,NM_024535,NM_001135110	chr16,chr16,chr16,chr16,chr16	-,-,-,-,+	CORO7,CORO7,CORO7-PAM16,CORO7,DNAJA3	2155,2155,2155,2155,11000
chr10:105037175-105037882	chr10	+	105037208	105037848	True	NM_032727,NM_001011663	chr10,chr10	+,-	INA,PCGF6	-339,73093
chr12:93093881-93095822	chr12	+	93094208	93095692	True	NM_001178097,NM_001037671,NM_003566	chr12,chr12,chr12	+,+,-	C12orf74,C12orf74,EEA1	926,926,227466
chr12:8768566-8770064	chr12	+	8768818	8769767	True	NM_020661,NM_020734	chr12,chr12	-,+	AICDA,RIMKLB	-3376,80750
chr22:22596509-22598448	chr22	+	22596865	22597947	True	NM_007128,NM_003935	chr22,chr22	+,-	VPREB1,TOP3B	1252,-259718
chr3:98251061-98251806	chr3	+	98251066	98251828	True	NM_001040199,NM_005290,NM_001040182,NM_001040183,NM_001040181,NM_019895,NM_001040200	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-,-	CLDND1,GPR15,CLDND1,CLDND1,CLDND1,CLDND1,CLDND1	-9156,-239,-9156,-9156,-9156,-9156,-9156
chr22:46934219-46934429	chr22	+	46934264	46934477	True	NM_015124,NM_014246	chr22,chr22	+,-	GRAMD4,CELSR1	88180,-1197
chr19:36103843-36104341	chr19	+	36103963	36104317	True	NM_000704,NM_015302	chr19,chr19	-,+	ATP4A,HAUS5	-49403,-368
chr2:26861131-26861540	chr2	+	26861214	26861544	True	NM_002246,NM_001029881	chr2,chr2	+,-	KCNK3,CIB4	54036,2717
chr9:130862523-130862802	chr9	+	130862542	130862801	True	NM_052901,NR_033374,NM_001006643,NM_001006642	chr9,chr9,chr9,chr9	+,-,+,+	SLC25A25,LOC100289019,SLC25A25,SLC25A25	-1776,18262,-1757,-8465
chr3:187463650-187464560	chr3	+	187463684	187464598	True	NR_034062,NM_001130845,NM_001706	chr3,chr3,chr3	+,-,-	LOC100131635,BCL6,BCL6	-43582,-9399,-171
chr3:38033500-38034029	chr3	+	38033642	38034000	True	NM_015873,NM_001130964	chr3,chr3	+,-	VILL,PLCD1	1077,32328
chr20:50159824-50160819	chr20	+	50160142	50160508	True	NM_173091,NM_014484,NM_012340	chr20,chr20,chr20	-,+,-	NFATC2,MOCS3,NFATC2	-884,-584830,-884
chr22:42465473-42466272	chr22	+	42465639	42466247	True	NM_000262,NM_001002034,NM_033318	chr22,chr22,chr22	-,+,+	NAGA,FAM109B,C22orf32	649,4007,9451
chr13:28183380-28184038	chr13	+	28183642	28184066	True	NM_153371,NM_152705	chr13,chr13	-,+	LNX2,POLR1D	10711,11936
chr7:99527198-99528844	chr7	+	99527355	99528564	True	NM_181538,NR_036679	chr7,chr7	-,+	GJC3,AZGP1P1	-112,49820
chr19:47525168-47525510	chr19	+	47525271	47525497	True	NM_002517,NM_017854	chr19,chr19	+,-	NPAS1,TMEM160	-1179,26435
chr7:152455487-152456090	chr7	+	152455682	152455911	True	NM_005431,NM_020445,NM_001040135	chr7,chr7,chr7	-,+,+	XRCC2,ACTR3B,ACTR3B	-82432,939,939
chr9:117372478-117373217	chr9	+	117372715	117373157	True	NM_153045,NM_001199233	chr9,chr9	+,-	C9orf91,LOC100505478	548,71269
chr1:43312642-43313818	chr1	+	43312647	43313868	True	NM_015911,NM_199342	chr1,chr1	+,-	ZNF691,CCDC23	-418,-29588
chr7:99101890-99102167	chr7	+	99101964	99102216	True	NM_145102,NM_014569,NM_032164	chr7,chr7,chr7	+,+,-	ZKSCAN5,ZKSCAN5,ZNF394	56,356,-4087
chr8:141470863-141471832	chr8	+	141471172	141471497	True	NM_001160372,NM_017444,NM_031466	chr8,chr8,chr8	-,+,-	TRAPPC9,CHRAC1,TRAPPC9	-3311,49903,-2494
chr3:73046451-73046964	chr3	+	73046621	73047013	True	NM_174907,NM_018130	chr3,chr3	+,-	PPP4R2,SHQ1	-557,-149023
chr19:35781757-35782139	chr19	+	35781947	35782131	True	NM_001199216,NM_152481,NM_021175,NM_080600,NM_002361	chr19,chr19,chr19,chr19,chr19	+,-,+,+,+	MAG,FAM187B,HAMP,MAG,MAG	857,-62319,-8588,857,857
chr17:37010596-37011146	chr17	+	37010850	37011168	True	NR_002576,NM_000978,NM_006148	chr17,chr17,chr17	-,-,+	SNORA21,RPL23,LASP1	-1602,-797,14943
chr2:102610380-102610640	chr2	+	102610463	102610637	True	NM_173343,NM_004633,NM_001145664	chr2,chr2,chr2	+,+,-	IL1R2,IL1R2,RFX8	4821,-2208,-519298
chr16:56899014-56899383	chr16	+	56899071	56899367	True	NM_000339,NM_001126108,NR_029680,NM_001126107,NM_005950	chr16,chr16,chr16,chr16,chr16	+,+,+,+,-	SLC12A3,SLC12A3,MIR138-2,SLC12A3,MT1G	-3,-3,-6692,-3,-197094
chr1:157064627-157065056	chr1	+	157064782	157065100	True	NM_001004341,NR_001560	chr1,chr1	-,+	ETV3L,CYCSP52	4550,33053
chr7:99914729-99915714	chr7	+	99914897	99915316	True	NM_001004351,NR_003613	chr7,chr7	+,-	SPDYE3,PMS2P1	-9631,18665
chr21:46011494-46012217	chr21	+	46011621	46012025	True	NM_198689,NM_198688	chr21,chr21	+,-	KRTAP10-7,KRTAP10-6	8471,411
chr21:46011494-46012217	chr21	-	45994006	45994185	False	NM_198694,NM_198687	chr21,chr21	-,+	KRTAP10-5,KRTAP10-4	6346,-544
chr21:46011494-46012217	chr21	-	46020876	46021253	False	NM_198689,NM_198688	chr21,chr21	+,-	KRTAP10-7,KRTAP10-6	-578,-8490
chr10:75402083-75402543	chr10	+	75402205	75402373	True	NM_021245,NM_024875,NM_004922	chr10,chr10,chr10	-,-,+	MYOZ1,SYNPO2L,SEC24C	-690,8464,101757
chr2:24397533-24397800	chr2	+	24397537	24397841	True	NM_001040710,NM_199346	chr2,chr2	+,-	C2orf84,PFN4	130,-51386
chr19:10360248-10360940	chr19	+	10360761	10360899	True	NM_015956,NM_146387,NM_004230,NM_146388	chr19,chr19,chr19,chr19	+,+,-,+	MRPL4,MRPL4,S1PR2,MRPL4	1740,1740,-18813,1740
chr4:2756611-2756986	chr4	+	2756763	2757025	True	NM_001122681,NM_001161527,NM_024309	chr4,chr4,chr4	+,-,-	SH3BP2,TNIP2,TNIP2	37724,779,1130
chr17:41273622-41274928	chr17	+	41273927	41274572	True	NR_003108,NM_007299,NM_007298,NM_007297,NM_007294,NR_027676,NM_007300	chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,-,-,-,-	NBR2,BRCA1,BRCA1,BRCA1,BRCA1,BRCA1,BRCA1	3027,2946,1610,2946,2978,2818,2978
chr7:55431430-55432889	chr7	+	55431516	55432860	True	NM_018697,NM_030796	chr7,chr7	+,-	LANCL2,VOPP1	280,207399
chr13:41359390-41360191	chr13	+	41359389	41359997	True	NM_005830,NM_014252	chr13,chr13	-,+	MRPS31,SLC25A15	-14042,3549
chr17:38276109-38276768	chr17	+	38276210	38276813	True	NM_001012241,NM_021724	chr17,chr17	+,-	MSL1,NR1D1	1976,-19237
chr4:79473157-79473436	chr4	+	79473288	79473368	True	NM_005139,NM_001040202	chr4,chr4	+,-	ANXA3,PAQR3	-597,387264
chr22:29703431-29704084	chr22	+	29703512	29703988	True	NM_006478,NM_152236,NM_152237,NM_001007279,NM_006477	chr22,chr22,chr22,chr22,chr22	+,+,+,-,-	GAS2L1,GAS2L1,GAS2L1,RASL10A,RASL10A	-566,-566,-566,7810,7810
chr1:149192458-149192759	chr1	+	149192462	149192772	True	NM_001024599,NR_027002	chr1,chr1	-,+	HIST2H2BF,LOC388692	206507,86703
chr5:14870664-14870957	chr5	+	14870747	14870987	True	NM_138348,NM_054027	chr5,chr5	+,-	FAM105B,ANKH	-206015,950
chr12:52840861-52841260	chr12	+	52840945	52841277	True	NM_002284,NM_005555	chr12,chr12	+,-	KRT86,KRT6B	-145347,4683
chr6:99960624-99961012	chr6	+	99960626	99961051	True	NM_001080481,NM_001195131	chr6,chr6	-,+	USP45,LOC100130890	2252,7818
chr18:51742330-51743341	chr18	+	51742628	51742994	True	NR_002970,NM_007195,NM_015832,NM_003927	chr18,chr18,chr18,chr18	-,+,-,-	SNORA37,POLI,MBD2,MBD2	5846,52854,8222,8222
chr8:42065142-42065643	chr8	+	42065277	42065687	True	NM_006803,NM_033011,NM_000930	chr8,chr8,chr8	+,-,-	AP3M2,PLAT,PLAT	-54864,-83,-83
chr2:33702637-33703555	chr2	+	33702646	33703586	True	NM_015475,NM_001139488	chr2,chr2	-,+	FAM98A,RASGRP3	120826,-1376
chr3:123169286-123170196	chr3	+	123169349	123170237	True	NM_012430,NM_183357	chr3,chr3	+,-	SEC22A,ADCY5	-248632,-1957
chr22:23487562-23487770	chr22	+	23487562	23487782	True	NM_004914,NM_014433	chr22,chr22	+,-	RAB36,RTDR1	-100,-3321
chr12:77159639-77161621	chr12	+	77159914	77161360	True	NM_001321,NM_015336	chr12,chr12	-,+	CSRP2,ZDHHC17	111490,-2121
chr3:125634842-125635419	chr3	+	125634860	125634938	True	NM_001015050,NR_024251,NR_024250	chr3,chr3,chr3	-,+,+	ALG1L,LOC100125556,LOC100125556	20999,505,505
chr17:15469519-15469965	chr17	+	15469545	15469841	True	NM_145301,NM_001135036,NR_037924,NM_001204478,NM_001130842	chr17,chr17,chr17,chr17,chr17	-,-,-,-,+	FAM18B2,FAM18B2,FAM18B2-CDRT4,FAM18B2-CDRT4,ZNF286A	-2600,-2600,-2600,-2600,133049
chr17:15469519-15469965	chr17	-	18681616	18681912	False	NM_016078,NM_001145045	chr17,chr17	+,-	FAM18B1,ZNF286B	2669,-96044
chr6:146874631-146875617	chr6	+	146874680	146875648	True	NR_003954,NM_006834	chr6,chr6	-,+	LOC729176,RAB32	249362,-9903
chr11:55866528-55868435	chr11	+	55866559	55868479	True	NM_001003750,NM_001004064,NM_001005200	chr11,chr11,chr11	+,-,+	OR8I2,OR8J3,OR8H2	-5826,36772,4039
chrY:59333284-59333741	chrY	+	59333335	59333785	True	NR_002179,NM_002186	chrY,chrY	-,+	TTTY17C,IL9R	-32002415,-3134
chrY:59333284-59333741	chrX	+	155230329	155230779	False	NM_002186,NM_018196	chrX,chrX	+,-	IL9R,TMLHE	-3134,-387707
chr19:57338882-57339178	chr19	+	57338881	57339206	True	NM_001146186,NR_024059	chr19,chr19	-,+	PEG3,MIMT1	-2507,13063
chr15:43506880-43508183	chr15	+	43506953	43507854	True	NM_000119,NM_001114134,NM_037370	chr15,chr15,chr15	-,-,+	EPB42,EPB42,CCNDBP1	5534,5534,-28866
chr7:124116522-124117306	chr7	+	124116548	124117320	True	NM_005302,NM_001174046	chr7,chr7	-,+	GPR37,SPAM1	288411,-550690
chr14:77790156-77791324	chr14	+	77790231	77791276	True	NM_001513,NM_145870,NM_145871,NM_013382	chr14,chr14,chr14,chr14	+,+,+,-	GSTZ1,GSTZ1,GSTZ1,POMT2	-2576,-3052,-3052,-3006
chr7:105745322-105746762	chr7	+	105745520	105746697	True	NM_152750,NM_006754,NM_182715	chr7,chr7,chr7	+,-,-	CDHR3,SYPL1,SYPL1	-141914,6427,6128
chr7:152162074-152162679	chr7	+	152162077	152162533	True	NM_170606,NR_027387	chr7,chr7	-,+	MLL3,LOC100128822	-28987,-919
chr4:1106173-1106501	chr4	+	1106253	1106395	True	NM_001193318,NM_001131034,NM_021923,NM_194439	chr4,chr4,chr4,chr4	-,-,+,-	RNF212,RNF212,FGFRL1,RNF212	1007,1007,-100059,1007
chr1:51840130-51840832	chr1	+	51840314	51840412	True	NM_014372,NM_001144832	chr1,chr1	+,-	RNF11,TTC39A	-138431,-29529
chrX:17765338-17765864	chrX	+	17765627	17765918	True	NR_033348,NM_006746	chrX,chrX	-,+	RAI2,SCML1	113084,-10086
chr10:105002994-105003273	chr10	+	105002994	105003155	True	NM_012229,NM_001143909	chr10,chr10	-,+	NT5C2,LOC729020	-49938,2488
chr2:172747732-172748826	chr2	+	172747817	172748676	True	NM_003705,NM_003642	chr2,chr2	-,+	SLC25A12,HAT1	2188,30258
chr4:6909627-6910276	chr4	+	6909692	6910300	True	NM_020773,NM_153376,NM_001113361	chr4,chr4,chr4	+,-,+	TBC1D14,CCDC96,TBC1D14	1194,134478,870
chr6:42714994-42715701	chr6	+	42715004	42715516	True	NM_003192,NR_037141	chr6,chr6	-,+	TBCC,LOC442211	-1120,-19741
chr1:149576806-149577097	chr1	+	149576966	149577100	True	NM_001024599,NR_024510	chr1,chr1	-,+	HIST2H2BF,LOC728855	-177737,-564
chr10:27387636-27388991	chr10	+	27387850	27389036	True	NM_014915,NM_001172303	chr10,chr10	-,+	ANKRD26,MASTL	441,54716
chr19:1275898-1276117	chr19	+	1275943	1276131	True	NR_023313,NR_027271,NM_017914,NM_001280,NR_023312	chr19,chr19,chr19,chr19,chr19	+,-,+,+,+	CIRBP,C19orf23,C19orf24,CIRBP,CIRBP	-6727,-5684,-474,-6727,-6727
chr5:115496777-115497032	chr5	+	115496829	115497054	True	NM_016144,NR_033363	chr5,chr5	+,-	COMMD10,ATG12	-76166,-319281
chr17:19282048-19282265	chr17	+	19282062	19282208	True	NM_001198695,NM_002749,NM_002404,NM_139033,NM_139032,NM_139034	chr17,chr17,chr17,chr17,chr17,chr17	-,+,-,+,+,+	MFAP4,MAPK7,MFAP4,MAPK7,MAPK7,MAPK7	8374,-339,8374,-1079,-1079,-339
chr20:6102938-6103259	chr20	+	6102940	6103298	True	NM_001127458,NM_017671	chr20,chr20	+,-	CRLS1,FERMT1	-115093,943
chr10:88128459-88130368	chr10	+	88128479	88129770	True	NM_017551,NM_001030015	chr10,chr10	-,+	GRID1,OPN4	-2229,284543
chr9:115482615-115483854	chr9	+	115482848	115483735	True	NM_001012994,NM_021218	chr9,chr9	+,-	SNX30,C9orf80	29398,-2461
chrY:10016728-10017240	chrY	+	10016908	10017234	True	NR_003593,NR_003589	chrY,chrY	+,-	TTTY23B,TTTY1B	-268552,-404980
chr3:125239172-125239411	chr3	+	125239285	125239466	True	NR_024250,NM_003794	chr3,chr3	+,-	LOC100125556,SNX4	395977,-227
chr8:37388809-37389325	chr8	+	37389186	37389374	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	163926,216240
chr19:51390359-51390973	chr19	+	51390378	51391018	True	NR_002948,NM_005551	chr19,chr19	-,+	KLKP1,KLK2	8686,-13741
chr19:22882070-22883195	chr19	+	22882089	22882507	True	NM_020855,NM_001080409	chr19,chr19	+,-	ZNF492,ZNF99	-65015,70337
chr2:21023913-21024950	chr2	+	21023912	21024956	True	NM_021925,NM_182828	chr2,chr2	-,+	C2orf43,GDF7	-1085,-157539
chr3:48601360-48601900	chr3	+	48601394	48601898	True	NM_033629,NM_004567,NM_033199	chr3,chr3,chr3	+,-,-	TREX1,PFKFB4,UCN2	-94216,-7167,-193
chr11:9593938-9594365	chr11	+	9594268	9594414	True	NR_036539,NM_003390,NM_001143976	chr11,chr11,chr11	-,+,+	LOC644656,WEE1,WEE1	-112023,813,1819
chr19:43421404-43422734	chr19	+	43421978	43422730	True	NM_002782,NM_001031850,NR_036584	chr19,chr19,chr19	-,-,+	PSG6,PSG6,LOC100289650	11,9,-96014
chr15:23257289-23258410	chr15	+	23257684	23258216	True	NR_024074,NR_003521	chr15,chr15	+,-	GOLGA8IP,WHAMML1	-2500,-49327
chr15:23257289-23258410	chr15	-	28954598	28955044	False	NR_033351,NR_026589	chr15,chr15	-,+	GOLGA8F,WHAMML2	-176455,27684
chr22:24091569-24092172	chr22	+	24092003	24092215	True	NM_013378,NM_021916,NM_182520	chr22,chr22,chr22	-,-,+	VPREB3,ZNF70,C22orf15	4465,1114,12992
chr2:208546865-208547600	chr2	+	208547071	208547307	True	NM_001142300,NM_001127395	chr2,chr2	+,-	CCNYL1,METTL21A	28956,-57098
chr3:98312532-98313038	chr3	+	98312658	98313028	True	NM_005290,NM_000097	chr3,chr3	+,-	GPR15,CPOX	-61831,-203
chr1:66299818-66301715	chr1	+	66300347	66301603	True	NM_002600,NR_029516	chr1,chr1	+,-	PDE4B,MIR101-1	-41549,-776156
chr20:62586454-62586781	chr20	+	62586612	62586700	True	NM_017859,NM_001193379,NR_027287	chr20,chr20,chr20	-,-,+	UCKL1,UCKL1,UCKL1-AS1	1150,-4085,-1926
chrX:38184277-38185550	chrX	+	38184517	38185551	True	NM_001034853,NM_000328,NM_000531	chrX,chrX,chrX	-,-,+	RPGR,RPGR,OTC	1288,1288,26184
chrX:56590535-56591888	chrX	+	56590546	56591670	True	NM_013444,NR_002308	chrX,chrX	+,-	UBQLN2,LOC442454	-572,172397
chr8:87974733-87975311	chr8	+	87975037	87975289	True	NM_019098,NM_173538	chr8,chr8	-,+	CNGB3,CNBD1	-219134,-96413
chr1:179107026-179107935	chr1	+	179107033	179107799	True	NM_022371,NM_001168239,NM_001136000,NM_005158	chr1,chr1,chr1,chr1	+,-,-,-	TOR3A,ABL2,ABL2,ABL2	-55980,4475,4475,4475
chr17:68084608-68085207	chr17	+	68084663	68085254	True	NM_170741,NR_036534	chr17,chr17	+,-	KCNJ16,FLJ36644	-13292,80341
chr20:4980332-4981012	chr20	+	4980389	4980949	True	NM_005116,NR_028370	chr20,chr20	-,+	SLC23A2,PCNA-AS1	1246,119282
chr1:27244180-27245475	chr1	+	27244394	27244657	True	NM_021969,NM_006600	chr1,chr1	-,+	NR0B2,NUDC	-3827,3566
chr16:66957600-66958422	chr16	+	66957755	66958289	True	NM_003869,NM_001204746,NM_001204744,NM_001204745,NM_001128850,NM_004165,NM_004062	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,-,-,-,-	CES2,CDH16,CDH16,CDH16,RRAD,RRAD,CDH16	10057,-4868,-4868,-4868,1200,1200,-4868
chr12:39813756-39815349	chr12	+	39813935	39815064	True	NM_001031748,NM_001173463	chr12,chr12	+,-	C12orf40,KIF21A	204907,22179
chr2:24584356-24584853	chr2	+	24584614	24584676	True	NM_001040710,NM_006277,NM_019595,NM_147152	chr2,chr2,chr2,chr2	+,-,-,-	C2orf84,ITSN2,ITSN2,ITSN2	-186695,-1217,-1217,-1217
chr3:50396346-50396546	chr3	+	50396375	50396537	True	NM_007022,NM_007024,NM_006545	chr3,chr3,chr3	+,-,-	CYB561D2,TMEM115,NPRL2	-8129,452,-7889
chr8:133119706-133121575	chr8	+	133119835	133121575	True	NM_015137,NM_001145095	chr8,chr8	+,-	EFR3A,HHLA1	-203530,-2323
chr1:23960427-23961592	chr1	+	23960659	23961237	True	NM_002167,NR_027042	chr1,chr1	-,+	ID3,MDS2	-74337,-6893
chr7:130021649-130022123	chr7	+	130021651	130022071	True	NM_001868,NM_018718	chr7,chr7	+,-	CPA1,TSGA14	-1412,58833
chr19:52269977-52270347	chr19	+	52269997	52270168	True	NM_002029,NM_001462,NM_001005738	chr19,chr19,chr19	-,+,+	FPR1,FPR2,FPR2	-14847,-3419,-5608
chr9:138592443-138592669	chr9	+	138592512	138592596	True	NM_020822,NM_001012415,NM_001101677	chr9,chr9,chr9	+,-,-	KCNT1,SOHLH1,SOHLH1	1434,-1138,-1138
chr17:33569707-33569970	chr17	+	33569711	33570009	True	NM_152462,NM_144975	chr17,chr17	-,+	AMAC1,SLFN5	-48299,76
chr22:32841378-32841836	chr22	+	32841564	32841882	True	NM_174932,NM_012179	chr22,chr22	-,+	BPIL2,FBXO7	11541,28824
chr1:161720569-161721051	chr1	+	161720728	161720888	True	NM_007240,NR_002595	chr1,chr1	+,-	DUSP12,RPL31P11	-1203,-65686
chr12:14923958-14925390	chr12	+	14924070	14925310	True	NM_177925,NR_027716,NM_175054	chr12,chr12,chr12	+,+,-	H2AFJ,H2AFJ,HIST4H4	1959,1959,-5
chr15:71091025-71092017	chr15	+	71091109	71091771	True	NM_018003,NM_001199017	chr15,chr15	-,+	UACA,LRRC49	-35259,93156
chr19:8371630-8372030	chr19	+	8371696	8371822	True	NM_001031,NM_016579,NM_001165895	chr19,chr19,chr19	+,-,-	RPS28,CD320,CD320	14561,1468,1468
chr18:13222011-13222564	chr18	+	13222208	13222564	True	NM_002828,NM_181482,NM_181481	chr18,chr18,chr18	-,+,+	PTPN2,C18orf1,C18orf1	-337874,-3473,-3473
chr22:32643486-32643784	chr22	+	32643514	32643830	True	NM_014227,NM_006604	chr22,chr22	-,+	SLC5A4,RFPL3	7538,107041
chr3:158833569-158835093	chr3	+	158834116	158835027	True	NM_002888,NM_001197114	chr3,chr3	-,+	RARRES1,IQCJ-SCHIP1	-383841,-47133
chr1:45242272-45242902	chr1	+	45242292	45242720	True	NR_001456,NR_001457,NM_153274,NR_000024,NR_000015,NM_001012	chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,+,+,+	SNORD38A,SNORD38B,BEST4,SNORD46,SNORD55,RPS8	793,1341,10756,-179,-806,-1097
chr5:762763-764283	chr5	+	762816	764125	True	NM_001166260,NM_007030	chr5,chr5	+,-	TRIP13,TPPP	128843,-69306
chr7:128314422-128315738	chr7	+	128314459	128315577	True	NM_001708,NM_001012454,NM_001128926	chr7,chr7,chr7	-,+,+	OPN1SW,FAM71F2,FAM71F2	100317,-2175,-2175
chr1:46940418-46941266	chr1	+	46940469	46941187	True	NM_147192,NM_001097611	chr1,chr1	+,-	DMBX1,KNCN	31480,75758
chr18:29544571-29546265	chr18	+	29545323	29546063	True	NM_014939,NM_017831	chr18,chr18	-,+	TRAPPC8,RNF125	-22232,52381
chr14:53258550-53259055	chr14	+	53258578	53259092	True	NM_198066,NM_145251	chr14,chr14	-,+	GNPNAT1,STYX	-192,-61746
chr5:180020442-180021143	chr5	+	180020548	180021188	True	NM_052863,NM_015455	chr5,chr5	-,+	SCGB3A1,CNOT6	-2061,-99182
chr8:66579365-66579753	chr8	+	66579520	66579663	True	NM_018120,NM_001145838	chr8,chr8	-,+	ARMC1,MTFR1	-33068,2444
chr19:30018731-30019100	chr19	+	30018784	30019052	True	NM_001031726,NM_001146339	chr19,chr19	-,+	C19orf12,VSTM2B	186961,-1344
chr1:6761318-6761536	chr1	+	6761318	6761570	True	NM_018198,NM_138350	chr1,chr1	-,+	DNAJC11,THAP3	446,-76159
chr2:148602705-148603204	chr2	+	148602729	148603245	True	NM_001190882,NM_001616	chr2,chr2	-,+	ORC4,ACVR2A	175111,-210
chrX:75393423-75394497	chrX	+	75393545	75394533	True	NM_016500,NM_138703	chrX,chrX	+,-	CXorf26,MAGEE2	-825,-388466
chr12:85306810-85307078	chr12	+	85306874	85307123	True	NM_001146335,NM_018057,NM_182767,NM_032165	chr12,chr12,chr12,chr12	-,-,-,+	SLC6A15,SLC6A15,SLC6A15,LRRIQ1	-268,-268,-268,122975
chr2:178774701-178775632	chr2	+	178774801	178775579	True	NM_001077358,NM_152945	chr2,chr2	-,+	PDE11A,RBM45	12036,201602
chr16:66728538-66729105	chr16	+	66728633	66728969	True	NR_037619,NM_178818,NM_181521	chr16,chr16,chr16	+,-,-	CMTM3,CMTM4,CMTM4	-90050,1691,1691
chr17:7282374-7283840	chr17	+	7282733	7283879	True	NM_003985,NM_001201576	chr17,chr17	+,-	TNK1,PLSCR3	485,14333
chr2:11887352-11887652	chr2	+	11887414	11887684	True	NM_012344,NM_145693	chr2,chr2	-,+	NTSR2,LPIN1	-77085,-725
chr11:3076540-3076832	chr11	+	3076662	3076880	True	NM_001194997,NM_001014437,NR_036542,NM_139273,NM_001751,NM_002555	chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,-,+	CARS,CARS,CARS,CARS,CARS,SLC22A18	1851,1851,1851,1851,1851,-153202
chr1:38231741-38232666	chr1	+	38231786	38232494	True	NM_001031740,NM_001099439,NM_173641	chr1,chr1,chr1	+,-,-	MANEAL,EPHA10,EPHA10	27279,-962,-962
chr4:1976028-1976359	chr4	+	1976249	1976335	True	NR_030641,NR_003004	chr4,chr4	-,+	MIR943,SCARNA22	11919,27
chr13:88349744-88350646	chr13	+	88349886	88350610	True	NM_015567,NR_033829	chr13,chr13	+,-	SLITRK5,LOC642345	-25073,-26668
chr9:130831055-130831468	chr9	+	130831070	130831432	True	NM_197956,NM_001006641	chr9,chr9	-,+	NAIF1,SLC25A25	-1471,-642
chr19:10947945-10948476	chr19	+	10947950	10948150	True	NM_001136482,NM_006858	chr19,chr19	+,-	C19orf38,TMED1	10955,-967
chr16:27074499-27075073	chr16	+	27074616	27075050	True	NM_145080,NM_001145545	chr16,chr16	-,+	NSMCE1,C16orf82	205113,3168
chr9:140194667-140195135	chr9	+	140194699	140195068	True	NM_017723,NM_001004354	chr9,chr9	+,-	C9orf167,NRARP	-22470,1685
chr1:153649796-153650371	chr1	+	153649867	153650327	True	NM_004515,NM_000906	chr1,chr1	-,+	ILF2,NPR1	-6388,836
chrX:45917819-45918479	chrX	+	45918086	45918420	True	NR_029636,NM_001129898	chrX,chrX	-,+	MIR222,ZNF673	-311556,388203
chr11:17100575-17100790	chr11	+	17100575	17100755	True	NM_005013,NM_001017	chr11,chr11	+,-	NUCB2,RPS13	197530,-1355
chr14:94936107-94937565	chr14	+	94936131	94937607	True	NM_006215,NM_001042518,NM_175739	chr14,chr14,chr14	+,-,-	SERPINA4,SERPINA9,SERPINA9	90175,5113,5113
chr7:107525559-107526722	chr7	+	107525717	107526648	True	NM_000111,NM_000108	chr7,chr7	-,+	SLC26A3,DLD	-82039,4937
chr5:89894430-89895936	chr5	+	89894478	89895953	True	NM_198273,NR_003149	chr5,chr5	-,+	LYSMD3,GPR98	-69077,-39913
chr11:7020602-7022047	chr11	+	7020670	7022086	True	NM_013249,NM_176822	chr11,chr11	-,+	ZNF214,NLRP14	19550,19613
chr2:55458847-55459311	chr2	+	55458866	55459360	True	NM_152385,NM_002954,NM_001135592,NM_001177413,NM_001135598	chr2,chr2,chr2,chr2,chr2	-,+,+,+,-	C2orf63,RPS27A,RPS27A,RPS27A,C2orf63	139,180,-12,453,389
chr3:147128688-147128982	chr3	+	147128739	147128983	True	NM_001168378,NM_001168379,NM_003412,NM_032153	chr3,chr3,chr3,chr3	-,-,+,-	ZIC4,ZIC4,ZIC1,ZIC4	-6668,-5432,-1609,-4332
chr6:14943093-14944198	chr6	+	14943293	14943956	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	302570,719394
chr2:91757195-91757401	chr2	+	91757250	91757404	True	NR_003503,NR_027238	chr2,chr2	+,-	GGT8P,LOC654342	205963,90621
chr2:91757195-91757401	chr2	-	87569466	87569542	False	NR_026846,NR_024204	chr2,chr2	-,+	LOC285074,NCRNA00152	-265930,185431
chr13:52586606-52586985	chr13	+	52586646	52587005	True	NR_036571,NM_000053,NM_001005918,NM_001004127	chr13,chr13,chr13,chr13	+,-,-,+	ALG11,ATP7B,ATP7B,ALG11	-174,-1016,-1016,-174
chr6:690625-692398	chr6	+	690789	692374	True	NM_018303,NR_036585	chr6,chr6	-,+	EXOC2,IRF4	785,-299109
chr5:131709626-131710160	chr5	+	131709928	131710114	True	NM_003060,NR_037500,NR_037898	chr5,chr5,chr5	+,-,-	SLC22A5,MIR3936,LOC553103	-4578,-8637,-4320
chrX:48696860-48697812	chrX	+	48696909	48697703	True	NM_013271,NM_181532	chrX,chrX	-,+	PCSK1N,ERAS	-2949,-9685
chr15:57206654-57207359	chr15	+	57206726	57207358	True	NM_003205,NM_207038,NM_207037,NR_015419,NM_207036	chr15,chr15,chr15,chr15,chr15	+,+,+,-,+	TCF12,TCF12,TCF12,LOC145783,TCF12	3474,3474,3474,3389,3474
chr10:10839199-10839622	chr10	+	10839199	10839603	True	NR_027082,NM_001025077	chr10,chr10	-,+	SFTA1P,CELF2	-2322,207655
chr16:48644721-48646471	chr16	+	48645149	48646210	True	NM_153029,NM_031490	chr16,chr16	-,+	N4BP1,LONP2	-1029,-366996
chr13:45694140-45694615	chr13	+	45694224	45694596	True	NM_004128,NM_198404	chr13,chr13	+,-	GTF2F2,KCTD4	34,80629
chr14:23283090-23283412	chr14	+	23283293	23283409	True	NM_178336,NM_001126105,NM_003982,NM_001126106	chr14,chr14,chr14,chr14	+,-,-,-	MRPL52,SLC7A7,SLC7A7,SLC7A7	15682,1713,1713,5655
chr11:72527828-72528424	chr11	+	72527867	72528259	True	NM_033388,NM_006645	chr11,chr11	+,-	ATG16L2,STARD10	-2467,-23117
chr13:100151095-100151298	chr13	+	100151124	100151332	True	NM_004951,NM_004800	chr13,chr13	-,+	GPR183,TM9SF2	-191375,2395
chr9:136151219-136151479	chr9	+	136151402	136151466	True	NM_000972,NM_020469	chr9,chr9	+,-	RPL7A,ABO	63602,-772
chr7:44364082-44364434	chr7	+	44364086	44364296	True	NM_172078,NM_172079,NM_172081,NM_172080,NM_172083,NM_172082,NM_172084,NM_001220,NM_006555	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,-,-,-,+	CAMK2B,CAMK2B,CAMK2B,CAMK2B,CAMK2B,CAMK2B,CAMK2B,CAMK2B,YKT6	984,984,984,984,984,984,984,984,-123559
chrX:77149391-77150943	chrX	+	77149412	77150698	True	NM_001866,NM_032121	chrX,chrX	+,-	COX7B,MAGT1	4262,417
chr17:38116778-38117317	chr17	+	38116858	38117218	True	NM_178171,NM_139280	chr17,chr17	+,-	GSDMA,ORMDL3	2007,-32974
chr17:54226516-54228297	chr17	+	54226784	54228228	True	NM_153228,NM_001099640	chr17,chr17	+,-	ANKFN1,TMEM100	2607,-417302
chr20:13976823-13977610	chr20	+	13977041	13977645	True	NM_080676,NM_025229	chr20,chr20	+,-	MACROD2,SEL1L2	-946,-5779
chr18:29170463-29171031	chr18	+	29170530	29170864	True	NM_004775,NM_000371	chr18,chr18	-,+	B4GALT6,TTR	93872,865
chr1:149824044-149824250	chr1	+	149824057	149824251	True	NM_001040874,NM_001005464,NM_003548,NR_036461,NM_001034077,NM_003516,NM_021059	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,-,-,+,+	HIST2H2AA4,HIST2H3A,HIST2H4A,HIST2H2BC,HIST2H4B,HIST2H2AA3,HIST2H3C	-1480,29,8524,-1717,8524,-1480,29
chr1:149824044-149824250	chr1	-	149812694	149812888	False	NM_001040874,NM_001005464,NM_003548,NR_036461,NM_001034077,NM_003516,NM_021059	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,+,-,+,-,-	HIST2H2AA4,HIST2H3A,HIST2H4A,HIST2H2BC,HIST2H4B,HIST2H2AA3,HIST2H3C	1480,-29,-8524,9502,-8524,1480,-29
chr16:18934879-18936656	chr16	+	18935121	18936297	True	NM_015092,NM_024847	chr16,chr16	-,+	SMG1,TMC7	1486,58958
chr3:197677289-197677644	chr3	+	197677292	197677682	True	NR_026787,NR_026786,NM_001134435,NM_032263,NM_000996,NM_001136049,NM_033029	chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,-,-,+,+,+	LMLN,LMLN,IQCG,IQCG,RPL35A,LMLN,LMLN	9388,9388,-496,9254,-291,9388,9388
chr17:64225348-64225788	chr17	+	64225421	64225694	True	NM_002737,NM_000042	chr17,chr17	+,-	PRKCA,APOH	73231,57
chr8:89340137-89340478	chr8	+	89340141	89340415	True	NM_005941,NM_003821	chr8,chr8	-,+	MMP16,RIPK2	-424,1429559
chr1:115053716-115053959	chr1	+	115053778	115054006	True	NM_003176,NM_015906,NM_033020	chr1,chr1,chr1	+,-,-	SYCP1,TRIM33,TRIM33	343448,3,3
chr4:49256828-49258575	chr4	+	49257961	49258589	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-269756,-349146
chr4:49256828-49258575	chr4	-	49540783	49541407	False	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-552569,-631968
chr4:49256828-49258575	chr1	+	143255287	143255914	False	NR_033189,NR_027468	chr1,chr1	+,-	LOC100130000,FLJ39739	431215,488593
chr4:49256828-49258575	chr21	-	9724017	9724072	False	NM_001033515,NR_037421	chr21,chr21	-,+	LOC100132288,MIR3648	244568,101759
chr21:41240748-41241927	chr21	+	41240747	41241866	True	NR_026543,NM_006198	chr21,chr21	-,+	C21orf88,PCP4	-255998,-1451
chr1:150039427-150039635	chr1	+	150039457	150039533	True	NM_007259,NM_020205	chr1,chr1	+,-	VPS45,OTUD7B	-166,-56771
chr8:145066354-145066718	chr8	+	145066394	145066756	True	NM_000837,NM_032789,NM_001009184	chr8,chr8,chr8	+,-,+	GRINA,PARP10,GRINA	-2219,-5759,-2219
chr15:93345657-93345990	chr15	+	93345713	93345892	True	NR_033769,NM_207446	chr15,chr15	+,-	ASB9P1,FAM174B	-7050,-146682
chr5:1881262-1881724	chr5	+	1881621	1881723	True	NM_016358,NM_004553	chr5,chr5	-,+	IRX4,NDUFS6	1207,-80176
chr2:240987887-240988213	chr2	+	240987903	240988236	True	NR_037808,NM_173351,NM_001080835	chr2,chr2,chr2	+,-,-	LOC150935,OR6B3,PRR21	-303400,-2414,-5504
chr14:37125766-37126038	chr14	+	37125805	37126055	True	NM_006194,NM_014360	chr14,chr14	+,-	PAX9,NKX2-8	717,-74019
chr1:89828265-89829863	chr1	+	89828420	89829765	True	NM_052942,NM_198460	chr1,chr1	-,+	GBP5,GBP6	-89876,-68
chr21:19736824-19738173	chr21	+	19736840	19737760	True	NM_002772,NM_001204174	chr21,chr21	-,+	TMPRSS15,CHODL	38270,-118709
chr19:47128806-47129720	chr19	+	47128823	47129655	True	NM_033258,NM_000960,NM_005184	chr19,chr19,chr19	-,-,+	GNG8,PTGIR,CALM3	8334,-469,-24362
chr1:228394898-228395345	chr1	+	228395204	228395394	True	NM_181465,NM_001098623,NM_052843	chr1,chr1,chr1	-,+,+	MRPL55,OBSCN,OBSCN	-98191,466,466
chr2:113190920-113191137	chr2	+	113190919	113191165	True	NM_153712,NM_001164463,NM_005054	chr2,chr2,chr2	+,-,-	TTL,RGPD8,RGPD5	48577,107,-8
chr2:113190920-113191137	chr2	-	110551907	110552097	False	NM_178584,NM_001123363,NM_001037866,NM_032260,NM_005054	chr2,chr2,chr2,chr2,chr2	-,+,+,+,+	SEPT10,RGPD6,RGPD6,RGPD5,RGPD5	-180124,-1623,-1623,-1623,8
chr2:113190920-113191137	chr2	+	111334546	111334736	False	NM_001142807,NM_001037866,NM_001123363,NM_032260,NM_005054	chr2,chr2,chr2,chr2,chr2	+,-,-,-,-	ACOXL,RGPD6,RGPD6,RGPD5,RGPD5	155413,1623,1623,1623,-8
chrX:73524258-73525408	chrX	+	73524261	73525312	True	NM_203303,NR_028379	chrX,chrX	+,-	ZCCHC13,MIR374AHG	-287,-10852
chr17:18576718-18577793	chr17	+	18576846	18577589	True	NM_001145045,NM_001037330,NR_026718	chr17,chr17,chr17	-,+,-	ZNF286B,TRIM16L,FOXO3B	8034,47812,-352
chr17:18576718-18577793	chr17	-	15615552	15616300	False	NM_006470,NM_020652	chr17,chr17	-,+	TRIM16,ZNF286A	-29359,-12713
chr1:242162362-242162965	chr1	+	242162510	242162862	True	NM_006027,NM_001004343	chr1,chr1	+,-	EXO1,MAP1LC3C	-150528,-125
chr2:121554977-121555826	chr2	+	121555084	121555729	True	NR_027181,NM_005270	chr2,chr2	-,+	LOC84931,GLI2	-331159,-268
chr2:136742924-136743223	chr2	+	136742961	136743239	True	NM_001349,NM_014607	chr2,chr2	-,+	DARS,UBXN4	33,-243823
chr16:81477429-81477782	chr16	+	81477472	81477690	True	NM_001076780,NM_198390	chr16,chr16	-,+	PKD1L2,CMIP	-223497,1084
chr8:38239647-38239861	chr8	+	38239652	38239884	True	NM_017778,NM_001199660,NM_023034,NM_001199659,NM_144652	chr8,chr8,chr8,chr8,chr8	-,+,-,+,+	WHSC1L1,LETM2,WHSC1L1,LETM2,LETM2	-44,4764,-44,4074,4074
chr19:44598808-44599048	chr19	+	44598926	44598987	True	NR_033341,NM_013398	chr19,chr19	-,+	LOC100379224,ZNF224	18400,-495
chr16:53700571-53701152	chr16	+	53700638	53701131	True	NM_001080432,NM_001127897	chr16,chr16	+,-	FTO,RPGRIP1L	36743,36690
chr9:131873142-131873392	chr9	+	131873315	131873395	True	NM_178003,NM_178001,NM_178000,NM_021131,NR_028048,NM_001193397,NM_000755	chr9,chr9,chr9,chr9,chr9,chr9,chr9	+,+,+,+,-,+,-	PPP2R4,PPP2R4,PPP2R4,PPP2R4,CRAT,PPP2R4,CRAT	197,197,197,-138,-245,571,-245
chr19:1451744-1451984	chr19	+	1451775	1451959	True	NM_152482,NM_005883	chr19,chr19	-,+	C19orf25,APC2	27319,-1678
chr10:48416843-48418010	chr10	+	48416896	48417898	True	NM_016204,NM_153034	chr10,chr10	-,+	GDF2,ZNF488	-43,-61858
chr3:123304429-123305028	chr3	+	123304469	123305001	True	NM_198402,NM_012430	chr3,chr3	-,+	PTPLB,SEC22A	-545,-383746
chr6:5004315-5004585	chr6	+	5004375	5004491	True	NM_001145115,NM_006638	chr6,chr6	+,-	PPP1R3G,RPP40	81228,-104
chr8:57026505-57026732	chr8	+	57026603	57026773	True	NM_005372,NM_001011667	chr8,chr8	-,+	MOS,CHCHD7	-62,97541
chr9:130662174-130663589	chr9	+	130662256	130663374	True	NM_001018078,NM_013443	chr9,chr9	+,-	FPGS,ST6GALNAC6	-96799,-385
chr2:170441358-170441930	chr2	+	170441357	170441719	True	NM_004792,NM_024622	chr2,chr2	+,-	PPIG,FASTKD1	-558,-10933
chr11:94302837-94303776	chr11	+	94303149	94303559	True	NM_005591,NM_152431	chr11,chr11	-,+	MRE11A,PIWIL4	-76109,-2727
chr1:46664289-46665561	chr1	+	46664344	46665589	True	NM_001013615,NM_017739	chr1,chr1	+,-	C1orf190,POMGNT1	3416,-223
chr19:56459101-56459365	chr19	+	56459101	56459363	True	NM_176810,NM_176811	chr19,chr19	-,+	NLRP13,NLRP8	-15399,46
chr3:160474039-160474251	chr3	+	160474069	160474275	True	NM_139245,NM_002268	chr3,chr3	+,-	PPM1L,KPNA4	-131,-190693
chrX:13408407-13410352	chrX	+	13408871	13409877	True	NM_001167890,NM_001135995	chrX,chrX	+,-	EGFL6,ATXN3L	177816,-70353
chr19:2283122-2283639	chr19	+	2283223	2283386	True	NM_198532,NM_004152	chr19,chr19	-,+	C19orf35,OAZ1	-1042,-13754
chr5:14870957-14871402	chr5	+	14871021	14871363	True	NM_138348,NM_054027	chr5,chr5	+,-	FAM105B,ANKH	-206293,574
chr16:30964960-30965206	chr16	+	30965049	30965143	True	NM_014712,NM_152288,NR_024348	chr16,chr16,chr16	+,+,-	SETD1A,ORAI3,FBXL19-AS1	3471,-4695,-30459
chr12:49070363-49071786	chr12	+	49070456	49071802	True	NR_029448,NR_002951,NM_017822	chr12,chr12,chr12	+,-,-	LOC255411,SNORA2B,C12orf41	49415,-9080,4283
chrX:30262506-30262929	chrX	+	30262576	30262968	True	NM_177415,NM_177404,NM_002363,NM_000475,NM_002367	chrX,chrX,chrX,chrX,chrX	+,+,+,-,+	MAGEB1,MAGEB1,MAGEB1,NR0B1,MAGEB4	-790,2302,-790,64577,-2581
chr8:61423430-61425071	chr8	+	61423898	61425029	True	NM_002865,NM_004056	chr8,chr8	+,-	RAB2A,CA8	4529,-229944
chr8:128098245-128098839	chr8	+	128098274	128098827	True	NM_001159542,NR_024393	chr8,chr8	+,-	POU5F1B,LOC727677	329029,395607
chr2:113520985-113521724	chr2	+	113520993	113521661	True	NM_152515,NM_005415	chr2,chr2	-,+	CKAP2L,SLC20A1	643,-117610
chr20:42543019-42543267	chr20	+	42543042	42543250	True	NM_176791,NM_032883,NM_001098796,NM_001098797	chr20,chr20,chr20,chr20	-,+,+,+	GTSF1L,TOX2,TOX2,TOX2	-187400,1531,1531,241
chr7:139877585-139878212	chr7	+	139877654	139877877	True	NM_030647,NR_024451	chr7,chr7	-,+	JHDM1D,LOC100134229	-913,-644
chr5:177019815-177020093	chr5	+	177019815	177020017	True	NR_024019,NM_017510,NM_007255	chr5,chr5,chr5	-,+,+	FAM193B,TMED9,B4GALT7	-38267,-659,7101
chr3:3840626-3840844	chr3	+	3840635	3840863	True	NM_016302,NM_020873	chr3,chr3	-,+	CRBN,LRRN1	-619234,257
chr19:44618174-44618822	chr19	+	44618178	44618471	True	NM_013362,NR_033341	chr19,chr19	+,-	ZNF225,LOC100379224	-681,-842
chr11:126043768-126044291	chr11	+	126043961	126044317	True	NM_001144827,NM_024556	chr11,chr11	-,+	RPUSD4,FAM118B	37320,37301
chr3:44750607-44751137	chr3	+	44750876	44751156	True	NM_020696,NM_033210,NM_001134442,NM_001134441,NM_001134440	chr3,chr3,chr3,chr3,chr3	-,+,+,+,+	KIAA1143,ZNF502,ZNF502,ZNF502,ZNF502	52067,2978,2978,2978,2978
chr6:168594597-168594836	chr6	+	168594684	168594794	True	NM_030615,NM_024919	chr6,chr6	+,-	KIF25,FRMD1	-176182,-114845
chr17:79360999-79361200	chr17	+	79361057	79361201	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	12338,-56583
chr19:48960458-48961025	chr19	+	48960567	48960832	True	NM_013348,NM_001080434,NM_170720	chr19,chr19,chr19	+,-,+	KCNJ14,LMTK3,KCNJ14	-1852,55664,3673
chr7:20708949-20710252	chr7	+	20709449	20710237	True	NM_178559,NM_182700	chr7,chr7	+,-	ABCB5,SP8	-22536,116328
chr6:27805977-27806420	chr6	+	27806131	27806407	True	NM_003510,NM_003520,NM_003541	chr6,chr6,chr6	-,+,-	HIST1H2AK,HIST1H2BN,HIST1H4K	-14,32,-6826
chr11:615332-615576	chr11	+	615416	615618	True	NM_004031,NM_000797,NM_004029,NM_001171968,NM_021924,NM_001572,NM_031264	chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,+,-,-,-,-,-	IRF7,DRD4,IRF7,CDHR5,CDHR5,IRF7,CDHR5	160,21686,431,9499,9499,431,9499
chr14:34928201-34928588	chr14	+	34928297	34928366	True	NR_002937,NM_138288	chr14,chr14	+,-	C14orf19,C14orf147	480761,3159
chr6:150344404-150345163	chr6	+	150344463	150345143	True	NM_025218,NM_130900	chr6,chr6	+,-	ULBP1,RAET1L	-59371,1575
chr6:150344404-150345163	chr6	-	150264872	150265360	False	NM_025217,NM_001001788	chr6,chr6	+,-	ULBP2,RAET1G	-1787,-20658
chr12:52969842-52970201	chr12	+	52969845	52970188	True	NM_175053,NM_002284	chr12,chr12	-,+	KRT74,KRT86	-2236,-274248
chr8:99084582-99085861	chr8	+	99084891	99085368	True	NM_001170806,NM_000989,NM_173549	chr8,chr8,chr8	+,-,+	C8orf47,RPL30,C8orf47	-8202,-27073,-8202
chr4:4227601-4228171	chr4	+	4227689	4228131	True	NM_145291,NM_177998	chr4,chr4	+,-	ZBTB49,OTOP1	63792,540
chr15:83104924-83105842	chr15	+	83105669	83105738	True	NR_026811,NM_198181	chr15,chr15	-,+	LOC80154,GOLGA6L9	77214,-7010
chr15:83104924-83105842	chr15	+	90839442	90839566	False	NR_028287,NR_028052	chr15,chr15	-,+	GABARAPL3,NGRN	53237,-30672
chr15:83104924-83105842	chr15	+	83195657	83195780	False	NR_033936,NR_033579	chr15,chr15	-,+	LOC727849,LOC440297	-12727,-65748
chr15:83104924-83105842	chr15	-	82931803	82931945	False	NR_033936,NR_033579	chr15,chr15	+,-	LOC727849,LOC440297	12847,54605
chr15:83104924-83105842	chr15	-	83010760	83010902	False	NM_001164465,NR_004847	chr15,chr15	-,+	GOLGA6L10,UBE2Q2P2	7419,12870
chr15:83104924-83105842	chr15	-	82634476	82634618	False	NM_001164465,NR_004847	chr15,chr15	-,+	GOLGA6L10,UBE2Q2P2	7211,12667
chr15:83104924-83105842	chr15	+	82811314	82811437	False	NR_033936,NR_033579	chr15,chr15	-,+	LOC727849,LOC440297	-12962,-57991
chr15:83104924-83105842	chr15	+	82729144	82729213	False	NR_026811,NM_198181	chr15,chr15	-,+	LOC80154,GOLGA6L9	69161,-7010
chr15:83104924-83105842	chr15	-	78206832	78207011	False	NM_001101404,NR_027024	chr15,chr15	+,-	SH2D7,LOC645752	177915,12302
chr15:83104924-83105842	chr15	+	72959198	72959323	False	NR_002780,NM_018652	chr15,chr15	-,+	HIGD2B,GOLGA6B	19292,-12286
chr15:83104924-83105842	chr15	-	74362610	74362735	False	NM_001130136,NM_001038640	chr15,chr15	+,-	ISLR2,GOLGA6A	58979,12281
chr15:83104924-83105842	chr15	+	75563052	75563177	False	NR_030360,NM_001145224	chr15,chr15	-,+	MIR631,GOLGA6D	82974,12004
chr15:83104924-83105842	chr15	+	75587331	75587456	False	NR_030360,NM_001145224	chr15,chr15	-,+	MIR631,GOLGA6D	58695,-12275
chr6:70507785-70508138	chr6	+	70507807	70508150	True	NM_018368,NM_001858	chr6,chr6	-,+	LMBRD1,COL19A1	-758,68297
chr15:63409162-63410377	chr15	+	63409455	63410069	True	NM_032857,NM_015920,NM_171846	chr15,chr15,chr15	+,-,+	LACTB,RPS27L,LACTB	3929,39725,3929
chr18:30055199-30056214	chr18	+	30055493	30056153	True	NR_003558,NM_022751	chr18,chr18	+,-	WBP11P1,FAM59A	35472,-5046
chr12:2923880-2925586	chr12	+	2924066	2924911	True	NM_018463,NM_031474	chr12,chr12	+,-	ITFG2,NRIP2	-2341,19360
chr1:46088073-46088294	chr1	+	46088082	46088292	True	NM_001190182,NM_001114938,NM_152298	chr1,chr1,chr1	-,-,+	CCDC17,CCDC17,NASP	1489,1489,-38473
chr6:130335573-130337173	chr6	+	130335647	130337192	True	NM_001007102,NM_032438,NM_001010876	chr6,chr6,chr6	+,+,-	L3MBTL3,L3MBTL3,C6orf191	2535,2535,-153231
chr15:76255840-76256986	chr15	+	76256435	76256993	True	NR_003136,NR_037623	chr15,chr15	-,+	FBXO22OS,FBXO22	-30964,-60293
chr20:56064146-56065352	chr20	+	56064164	56065179	True	NM_002591,NM_080618	chr20,chr20	+,-	PCK1,CTCFL	70957,35026
chr19:53029669-53029985	chr19	+	53029885	53029950	True	NM_001039886,NM_001105549	chr19,chr19	+,-	ZNF808,ZNF83	958,111749
chr15:66998265-66998776	chr15	+	66998348	66998814	True	NM_005585,NM_001142861,NM_207338,NR_027654	chr15,chr15,chr15,chr15	+,+,-,+	SMAD6,SMAD6,LCTL,SMAD6	-3725,2115,-140513,-3725
chr17:61677523-61678087	chr17	+	61677554	61678128	True	NM_016360,NM_030576	chr17,chr17	+,-	TACO1,LIMD2	102,99441
chr6:41023377-41023951	chr6	+	41023420	41023826	True	NM_173561,NM_145063,NM_006789	chr6,chr6,chr6	-,-,+	UNC5CL,C6orf130,APOBEC2	-16482,16412,-2531
chr3:44295867-44296998	chr3	+	44296195	44296785	True	NM_181489,NM_001145030	chr3,chr3	-,+	ZNF445,C3orf77	222433,-12869
chr8:22437137-22437372	chr8	+	22437140	22437308	True	NR_027715,NM_198042,NM_176871,NM_021630	chr8,chr8,chr8,chr8	-,+,+,+	FLJ14107,PDLIM2,PDLIM2,PDLIM2	62464,678,678,-937
chr20:36793184-36793477	chr20	+	36793193	36793517	True	NM_004613,NM_021215,NM_198951	chr20,chr20,chr20	-,+,-	TGM2,RPRD1B,TGM2	233,-131296,233
chr17:40576583-40578150	chr17	+	40576738	40577743	True	NM_001130020,NM_012232	chr17,chr17	+,-	ATP6V0A1,PTRF	33118,-1400
chr16:15487977-15488519	chr16	+	15488292	15488367	True	NM_001128423,NR_037466,NM_173803	chr16,chr16,chr16	+,-,+	MPV17L,MIR3180-4,MPV17L	1243,-239433,1243
chr16:15487977-15488519	chr16	-	28636202	28636271	False	NM_001199142,NM_177536	chr16,chr16	+,-	EIF3C,SULT1A1	63607,-1336
chr15:63333327-63333557	chr15	+	63333326	63333554	True	NM_001018020,NM_001018007,NM_001018004,NM_001018005,NM_001018008,NM_000366,NM_001018006,NM_015920	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,-	TPM1,TPM1,TPM1,TPM1,TPM1,TPM1,TPM1,RPS27L	1283,1283,1283,1283,7081,1283,1283,116237
chr6:46138955-46139904	chr6	+	46139177	46139900	True	NM_014936,NM_021572	chr6,chr6	+,-	ENPP4,ENPP5	-41527,-460
chr6:114270557-114270822	chr6	+	114270607	114270871	True	NM_001527,NR_027060	chr6,chr6	-,+	HDAC2,FLJ34503	21538,-45117
chr1:33205710-33206198	chr1	+	33205843	33206201	True	NM_020888,NM_030786	chr1,chr1	+,-	KIAA1522,SYNC	1310,-37482
chr17:41409161-41410222	chr17	+	41409268	41410240	True	NR_027412,NM_145041	chr17,chr17	-,+	LOC100130581,TMEM106A	56076,-45425
chr1:156571537-156572025	chr1	+	156571546	156572072	True	NM_144772,NM_182679,NM_015590	chr1,chr1,chr1	+,-,-	APOA1BP,GPATCH4,GPATCH4	-10040,-267,-267
chr7:116825699-116826507	chr7	+	116826073	116826492	True	NR_002332,NR_002331	chr7,chr7	+,-	ST7OT3,ST7OT2	-3390,-40459
chr1:241869238-241870319	chr1	+	241869553	241870306	True	NM_014322,NM_144625	chr1,chr1	-,+	OPN3,WDR64	-65852,-54024
chr12:102114779-102116419	chr12	+	102115236	102116263	True	NM_001177948,NM_020244	chr12,chr12	-,+	SYCP3,CHPT1	17047,-23877
chr15:52819893-52820389	chr15	+	52819993	52820403	True	NM_001142495,NM_002748,NM_000259	chr15,chr15,chr15	-,+,-	MYO5A,MAPK6,MYO5A	894,-508641,894
chr9:115244882-115245781	chr9	+	115245088	115245484	True	NR_036085,NM_133465	chr9,chr9	-,+	MIR3134,KIAA1958	-132543,3763
chr19:42351175-42352135	chr19	+	42351595	42352125	True	NM_173506,NM_001040283	chr19,chr19	-,+	LYPD4,DMRTC2	-3087,-2560
chr20:42838852-42839199	chr20	+	42838896	42839178	True	NM_024034,NM_016470	chr20,chr20	+,-	GDAP1L1,C20orf111	36729,303
chr5:153573771-153574059	chr5	+	153573890	153574078	True	NM_018691,NM_198321	chr5,chr5	-,+	FAM114A2,GALNT10	-155393,-3652
chr1:6088558-6089315	chr1	+	6088610	6089088	True	NM_001199860,NM_172130,NM_015102,NM_003636	chr1,chr1,chr1,chr1	+,+,-,+	KCNAB2,KCNAB2,NPHP4,KCNAB2	5259,-2588,-36077,-2588
chr6:41745882-41747163	chr6	+	41745969	41746986	True	NM_001134493,NM_013397,NM_006653	chr6,chr6,chr6	+,+,-	TOMM6,PRICKLE4,FRS3	8194,1513,694
chr8:146011528-146011738	chr8	+	146011655	146011747	True	NM_000973,NM_033301,NM_030580,NM_213605	chr8,chr8,chr8,chr8	-,-,-,+	RPL8,RPL8,ZNF34,ZNF517	6110,6034,1030,12513
chr3:137902658-137902964	chr3	+	137902692	137902834	True	NM_014154,NM_015396,NM_213654,NM_016216	chr3,chr3,chr3,chr3	+,+,+,-	ARMC8,ARMC8,ARMC8,DBR1	3313,3313,3313,-8901
chr14:74181213-74183093	chr14	+	74181382	74183080	True	NM_031427,NM_006029	chr14,chr14	+,-	DNAL1,PNMA1	-69855,-254
chr4:49284007-49284329	chr4	+	49284060	49284328	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-295846,-375245
chr4:49284007-49284329	chr4	-	49329968	49330236	False	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-341754,-421153
chr6:154376377-154377550	chr6	+	154376600	154377598	True	NM_001130699,NM_001145284	chr6,chr6	-,+	IPCEF1,OPRM1	273667,-16105
chr12:4930435-4931294	chr12	+	4930667	4930893	True	NM_006422,NM_002235	chr12,chr12	-,+	AKAP3,KCNA6	-176324,-12376
chr3:33139015-33139215	chr3	+	33139022	33139102	True	NM_001039770,NM_001136238,NM_006371,NM_000404,NM_001079811,NM_001135602	chr3,chr3,chr3,chr3,chr3,chr3	-,-,+,-,-,-	TMPPE,TMPPE,CRTAP,GLB1,GLB1,GLB1	-729,-729,16347,-328,-708,-328
chr19:14940056-14941951	chr19	+	14940448	14941893	True	NM_017506,NM_012377	chr19,chr19	-,+	OR7A5,OR7C2	-1172,110407
chr20:2843922-2844262	chr20	+	2843961	2844123	True	NM_002836,NM_022760	chr20,chr20	+,-	PTPRA,FAM113A	717,-22629
chr5:150714174-150714976	chr5	+	150714491	150714937	True	NM_001167607,NM_181776	chr5,chr5	+,-	GM2A,SLC36A2	-81933,12264
chr7:6957713-6957954	chr7	+	6957732	6957886	True	NM_198097,NM_173565	chr7,chr7	-,+	C7orf28B,RSPH10B	-91806,-164044
chr17:71306693-71306974	chr17	+	71306710	71306872	True	NM_012121,NM_017941	chr17,chr17	-,+	CDC42EP4,C17orf80	1321,-77985
chr9:139970535-139971020	chr9	+	139970783	139970867	True	NM_207309,NM_178448	chr9,chr9	+,-	UAP1L1,C9orf140	1085,-5755
chr1:240253724-240255169	chr1	+	240253782	240254951	True	NM_022469,NM_020066	chr1,chr1	-,+	GREM2,FMN2	520562,233
chr10:29919577-29920425	chr10	+	29919623	29920229	True	NM_021738,NR_003930	chr10,chr10	-,+	SVIL,LOC387647	3722,-221173
chr7:57081246-57081603	chr7	+	57081366	57081473	True	NR_036270,NR_036102	chr7,chr7	-,+	MIR4283-2,MIR3147	-57795,391257
chr7:57081246-57081603	chr7	-	63023541	63023591	False	NR_028349,NR_036246	chr7,chr7	-,+	LOC100287834,MIR4283-1	-164122,57876
chr14:70282068-70283969	chr14	+	70282197	70283771	True	NM_003049,NM_006925	chr14,chr14	-,+	SLC10A1,SRSF5	-18191,-48414
chr15:69112489-69112745	chr15	+	69112671	69112743	True	NR_031680,NM_006305	chr15,chr15	+,-	MIR548H4,ANP32A	3559,568
chr17:21113895-21114346	chr17	+	21114014	21114282	True	NM_003876,NM_145109,NR_024547	chr17,chr17,chr17	-,+,-	TMEM11,MAP2K3,TMEM11	3676,73685,3676
chr16:3493505-3493712	chr16	+	3493522	3493752	True	NM_001083601,NM_152457	chr16,chr16	+,-	NAT15,ZNF597	31,-32
chr7:100272446-100272673	chr7	+	100272445	100272719	True	NM_005273,NM_022574	chr7,chr7	+,-	GNB2,GIGYF1	-1133,14201
chr1:161102678-161102916	chr1	+	161102680	161102956	True	NM_001185094,NM_032998,NM_001039712,NM_001039711	chr1,chr1,chr1,chr1	+,-,-,-	NIT1,DEDD,DEDD,DEDD	-14823,-202,-424,-202
chr4:48988532-48988799	chr4	+	48988576	48988792	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-362,-79761
chr18:11696426-11697256	chr18	+	11696513	11697123	True	NM_023075,NM_182978	chr18,chr18	-,+	MPPE1,GNAL	211568,-7441
chr11:22646682-22646939	chr11	+	22646705	22646951	True	NM_001143830,NM_022725	chr11,chr11	+,-	GAS2,FANCF	41208,486
chr2:232328333-232328551	chr2	+	232328333	232328552	True	NR_002921,NM_005381,NR_004398,NM_145236,NR_002908	chr2,chr2,chr2,chr2,chr2	-,-,-,+,-	SNORA75,NCL,SNORD82,B3GNT7,SNORD20	-7686,703,-3180,-68055,-7099
chr3:69060602-69061274	chr3	+	69060779	69061282	True	NM_006407,NM_173654	chr3,chr3	+,-	ARL6IP5,C3orf64	72807,1542
chr1:203140629-203141777	chr1	+	203140920	203141808	True	NM_004997,NM_001048230	chr1,chr1	-,+	MYBPH,ADORA1	3184,-44135
chr19:7986396-7986943	chr19	+	7986567	7986967	True	NM_206833,NM_001195259,NM_003083,NR_030717	chr19,chr19,chr19,chr19	-,+,+,+	CTXN1,LOC645781,SNAPC2,SNAPC2	4134,-5586,-1424,-751
chr4:57975357-57975791	chr4	+	57975698	57975834	True	NR_034081,NM_001553	chr4,chr4	+,-	LOC255130,IGFBP7	93,755
chr2:68467961-68468700	chr2	+	68467997	68468708	True	NM_000945,NM_020143	chr2,chr2	-,+	PPP3R1,PNO1	10993,-83046
chr11:102744497-102745754	chr11	+	102745146	102745811	True	NM_002426,NM_001080463	chr11,chr11	-,+	MMP12,DYNC2H1	11,234348
chr15:93451329-93452253	chr15	+	93451502	93451970	True	NM_001166286,NR_036136,NM_001271,NM_001042572	chr15,chr15,chr15,chr15	-,+,+,+	RGMA,MIR3175,CHD2,CHD2	164476,-3935,-8013,-8013
chr16:56692008-56693578	chr16	+	56692051	56693548	True	NM_005947,NM_005949,NM_005950	chr16,chr16,chr16	+,+,-	MT1B,MT1F,MT1G	-6291,-247,8484
chr14:106383479-106384028	chr14	+	106383511	106384037	True	NR_002224,NR_026800	chr14,chr14	-,+	ADAM6,KIAA0125	54371,-186
chr14:51344507-51345585	chr14	+	51344675	51345547	True	NM_181533,NM_181814,NM_182944	chr14,chr14,chr14	+,+,-	ABHD12B,ABHD12B,NIN	-5848,-5848,-46836
chr7:6794445-6794876	chr7	+	6794740	6794914	True	NM_173565,NM_016265,NM_001099697	chr7,chr7,chr7	+,-,+	RSPH10B,ZNF12,RSPH10B2	-1051,-48174,-1051
chr7:6794445-6794876	chr7	-	6009139	6009313	False	NM_006303,NM_173565,NM_001099697	chr7,chr7,chr7	+,-,-	AIMP2,RSPH10B,RSPH10B2	39568,1051,1051
chrX:74494397-74494688	chrX	+	74494416	74494704	True	NM_145052,NM_004299,NR_030774	chrX,chrX,chrX	+,-,+	UPRT,ABCB7,UPRT	-573,-118284,-573
chr1:6842537-6842883	chr1	+	6842567	6842643	True	NM_001195563,NM_018198,NM_015215	chr1,chr1,chr1	+,-,+	CAMTA1,DNAJC11,CAMTA1	2740,-80601,2740
chr15:25492445-25492742	chr15	+	25492575	25492665	True	NR_003353,NR_003358,NM_130838,NR_003344,NR_003352,NR_003351,NR_003357,NR_003356,NR_003355,NR_003354,NR_003302,NR_003303,NR_003359	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,-,+,+,+,+,+,+,+,+,+,+	SNORD115-38,SNORD115-43,UBE3A,SNORD115-29,SNORD115-37,SNORD115-36,SNORD115-42,SNORD115-41,SNORD115-40,SNORD115-39,SNORD115-10,SNORD115-11,SNORD115-44	-7641,1679,158038,1679,-9493,1679,-134,-2001,-3865,-5733,-134,1679,3340
chr10:81837046-81837571	chr10	+	81837237	81837618	True	NR_027430,NR_027431,NR_027432,NR_027429,NR_027428,NM_025125	chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,-,+	LOC219347,LOC219347,LOC219347,LOC219347,LOC219347,C10orf57	1382,1382,1382,1382,1382,807
chr3:15105547-15105986	chr3	+	15105630	15105974	True	NM_022497,NM_003298	chr3,chr3	-,+	MRPS25,NR2C2	892,-116445
chr1:182029893-182031853	chr1	+	182029941	182031811	True	NR_034131,NM_001009992	chr1,chr1	+,-	NCRNA00272,ZNF648	344944,260
chr21:45196116-45196431	chr21	+	45196360	45196422	True	NM_000100,NM_003683	chr21,chr21	-,+	CSTB,RRP1	-101,12995
chr13:25493680-25494849	chr13	+	25494269	25494594	True	NM_018451,NM_031277	chr13,chr13	-,+	CENPJ,RNF17	2552,-156019
chr2:27888182-27889248	chr2	+	27888232	27888928	True	NM_014860,NM_018158	chr2,chr2	-,+	SUPT7L,SLC4A1AP	-1783,-1959
chr3:12882606-12883111	chr3	+	12882612	12883134	True	NM_001007073,NM_012298,NR_002582,NM_000994,NM_001007074	chr3,chr3,chr3,chr3,chr3	-,+,-,-,-	RPL32,CAND2,SNORA7A,RPL32,RPL32	-3,-44492,-663,-3,-663
chr10:73849056-73849470	chr10	+	73849089	73849446	True	NM_001134434,NM_004273,NM_014767	chr10,chr10,chr10	-,+,-	SPOCK2,CHST3,SPOCK2	-299,-125020,-299
chr19:55171752-55172513	chr19	+	55171931	55172439	True	NM_006847,NM_001081438,NM_145057	chr19,chr19,chr19	+,+,-	LILRB4,LILRB4,CDC42EP5	1684,1684,-187509
chr6:135263280-135263513	chr6	+	135263450	135263538	True	NM_170771,NM_022568,NM_001193480,NM_005375	chr6,chr6,chr6,chr6	-,-,-,+	ALDH8A1,ALDH8A1,ALDH8A1,MYB	7772,7772,7772,238914
chr19:14629347-14629616	chr19	+	14629455	14629587	True	NM_006145,NR_030369	chr19,chr19	-,+	DNAJB1,MIR639	-254,10767
chr5:39220258-39222075	chr5	+	39220806	39221748	True	NM_199335,NM_001465,NM_003999	chr5,chr5,chr5	-,-,+	FYB,FYB,OSMR	-1139,-1139,-374756
chr1:118688231-118689913	chr1	+	118688563	118689920	True	NM_006784,NM_206996	chr1,chr1	+,-	WDR3,SPAG17	-216243,37984
chr6:165574982-165576231	chr6	+	165575277	165576031	True	NM_144980,NR_027284	chr6,chr6	-,+	C6orf118,LOC441177	147138,825007
chr3:58562620-58562898	chr3	+	58562623	58562921	True	NM_001076778,NM_007177,NM_153331	chr3,chr3,chr3	-,-,+	FAM107A,FAM107A,KCTD6	620,620,-78584
chr11:62528143-62528591	chr11	+	62528144	62528423	True	NM_002696,NM_024784	chr11,chr11	+,-	POLR2G,ZBTB3	587,-6488
chr16:68118179-68118639	chr16	+	68118214	68118544	True	NM_004555,NM_173165,NM_173163,NM_018380	chr16,chr16,chr16,chr16	+,+,+,-	NFATC3,NFATC3,NFATC3,DDX28	724,724,724,-60444
chr3:129265670-129266085	chr3	+	129265670	129265771	True	NM_153833,NM_015103	chr3,chr3	+,-	H1FOO,PLXND1	-3665,59864
chr2:27498355-27498981	chr2	+	27498361	27498856	True	NM_003459,NM_173650,NM_187841,NM_032546	chr2,chr2,chr2,chr2	-,+,+,+	SLC30A3,DNAJC5G,TRIM54,TRIM54	-12401,-123,6440,6440
chr19:51471816-51472548	chr19	+	51472078	51472586	True	NM_005551,NM_002774,NM_001012965,NM_001012964	chr19,chr19,chr19,chr19	+,-,-,-	KLK2,KLK6,KLK6,KLK6	-95440,393,-31,-31
chr15:41850113-41850764	chr15	+	41850212	41850756	True	NM_015540,NM_006293	chr15,chr15	-,+	RPAP1,TYRO3	-13748,463
chr5:54564411-54564995	chr5	+	54564464	54564823	True	NM_021147,NM_015360	chr5,chr5	-,+	CCNO,SKIV2L2	-34956,38752
chr5:70882979-70883204	chr5	+	70883061	70883247	True	NM_022132,NR_033968	chr5,chr5	+,-	MCCC2,LOC100049076	-1,-327939
chr13:99998514-99998760	chr13	+	99998609	99998807	True	NM_004951,NR_030353,NR_024013	chr13,chr13,chr13	-,+,+	GPR183,MIR623,FKSG29	-38860,9577,4866
chr15:78426465-78426795	chr15	+	78426465	78426549	True	NM_006383,NM_005530	chr15,chr15	-,+	CIB2,IDH3A	-2587,15169
chr21:34599081-34599967	chr21	+	34599322	34599900	True	NM_207585,NM_207584,NR_024102,NM_000874	chr21,chr21,chr21,chr21	+,+,-,+	IFNAR2,IFNAR2,C21orf54,IFNAR2	2330,2330,-56781,2330
chr19:983759-984087	chr19	+	983883	984071	True	NM_024100,NM_001033026	chr19,chr19	+,-	WDR18,C19orf6	256,37120
chr8:12176656-12177802	chr8	+	12176656	12177625	True	NM_001195257,NM_001037804,NR_026789	chr8,chr8,chr8	-,-,+	LOC100133267,DEFB130,FAM66A	-831,-831,41902
chr8:12176656-12177802	chr8	+	11930087	11931056	False	NM_001195257,NM_001037804,NM_001039615	chr8,chr8,chr8	-,-,+	LOC100133267,DEFB130,ZNF705D	-831,-831,15790
chr15:27009219-27010199	chr15	+	27009557	27009991	True	NM_000814,NM_000810,NM_021912	chr15,chr15,chr15	-,+,-	GABRB3,GABRA5,GABRB3	8282,101874,8994
chr6:24911569-24911801	chr6	+	24911607	24911679	True	NM_015895,NM_014722	chr6,chr6	+,-	GMNN,FAM65B	-136494,-412
chr17:48289680-48290151	chr17	+	48289706	48290150	True	NM_001135697,NM_000088	chr17,chr17	+,-	SGCA,COL1A1	-46392,-10706
chr15:75659243-75659953	chr15	+	75659294	75659720	True	NM_006715,NM_024608	chr15,chr15	-,+	MAN2C1,NEIL1	1271,-20014
chr20:51592582-51593701	chr20	+	51592583	51593722	True	NM_006526,NM_173485	chr20,chr20	-,+	ZNF217,TSHZ2	605964,-3693
chr1:31850748-31852340	chr1	+	31850750	31852388	True	NM_001199038,NM_004102	chr1,chr1	+,-	SERINC2,FABP3	30023,-4827
chr17:43044317-43044763	chr17	+	43044536	43044604	True	NM_213607,NM_006688	chr17,chr17	+,-	CCDC103,C1QL1	-67433,1090
chr10:64000654-64002478	chr10	+	64000654	64001839	True	NM_014951,NM_145307	chr10,chr10	+,-	ZNF365,RTKN2	132076,26677
chr12:53399972-53400233	chr12	+	53400058	53400260	True	NM_001417,NR_033854	chr12,chr12	+,-	EIF4B,LOC283335	-47,48012
chr2:204104473-204105166	chr2	+	204104532	204105180	True	NM_213589,NM_177538	chr2,chr2	-,+	RAPH1,CYP20A1	294928,-1419
chr8:120885906-120886192	chr8	+	120885910	120886084	True	NM_024094,NM_022783	chr8,chr8	-,+	DSCC1,DEPTOR	-17740,-61
chr15:72979868-72980845	chr15	+	72980448	72980640	True	NR_002780,NM_033028	chr15,chr15	-,+	HIGD2B,BBS4	-1958,-1987
chr3:179366275-179368105	chr3	+	179366467	179368022	True	NM_177988,NM_003940	chr3,chr3	-,+	MRPL47,USP13	-44033,2910
chr5:140754252-140754612	chr5	+	140754308	140754656	True	NM_018924,NM_032086,NM_018920,NM_032097,NM_018919,NM_005642,NM_032087	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,-,+	PCDHGB3,PCDHGA6,PCDHGA7,PCDHGB3,PCDHGA6,TAF7,PCDHGA7	-4397,-708,7810,-4397,-708,-53957,7810
chr5:32443050-32443463	chr5	+	32443177	32443499	True	NM_016107,NM_006713	chr5,chr5	-,+	ZFR,SUB1	1395,142105
chr19:14680078-14680490	chr19	+	14680318	14680538	True	NM_004146,NM_001204118	chr19,chr19	-,+	NDUFB7,CLEC17A	2401,13357
chr19:50643573-50643897	chr19	+	50643583	50643765	True	NM_001145809,NR_024243,NR_024231,NR_024230	chr19,chr19,chr19,chr19	+,-,-,-	MYH14,SNAR-D,SNAR-B1,SNAR-B2	63119,-6,-1089,-1089
chr1:9648167-9648585	chr1	+	9648307	9648499	True	NM_001130924,NR_027045,NM_001010866	chr1,chr1,chr1	+,-,+	TMEM201,C1orf200,TMEM201	432,66195,432
chr2:88478726-88479429	chr2	+	88478889	88479457	True	NM_018271,NM_001443	chr2,chr2	+,-	THNSL2,FABP1	-9105,-51239
chr12:124067665-124068273	chr12	+	124067783	124067967	True	NM_178314,NM_006815	chr12,chr12	-,+	RILPL1,TMED2	-49518,1108
chr8:77912757-77913003	chr8	+	77912860	77912960	True	NM_024721,NM_001172087,NM_001172086,NM_001079867,NM_000318	chr8,chr8,chr8,chr8,chr8	+,-,-,-,-	ZFHX4,PEX2,PEX2,PEX2,PEX2	-319396,370,370,-336,-336
chr17:18966945-18967184	chr17	+	18967093	18967233	True	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	63548,-16757
chr17:18966945-18967184	chr17	+,-	19091544	19093342	False	NM_006613,NM_001102664	chr17,chr17	-,+	GRAP,EPN2	-141208,47347
chr17:18966945-18967184	chr17	-	18965440	18965490	False	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	65291,-15104
chr17:18966945-18967184	chr17	+	19015593	19015733	False	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	15048,-65257
chr3:148578049-148578901	chr3	+	148578091	148578929	True	NM_001870,NM_003071	chr3,chr3	+,-	CPA3,HLTF	4113,225462
chr2:63833369-63834460	chr2	+	63833646	63834405	True	NM_015910,NM_001199112	chr2,chr2	-,+	WDPCP,MDH1	-17779,-17420
chr2:96675681-96676079	chr2	+	96675683	96676003	True	NM_207328,NR_003698	chr2,chr2	-,+	GPAT2,LOC729234	24774,295
chr2:96675681-96676079	chr2	+	96068096	96068273	False	NM_001164464,NM_016044	chr2,chr2	-,+	TRIM43B,FAHD2A	82383,174
chr12:123466368-123466570	chr12	+	123466492	123466608	True	NM_203444,NM_024623,NM_018694,NM_001002251,NM_001002252,NM_016638	chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,+,+,+	ABCB9,OGFOD2,ARL6IP4,ARL6IP4,ARL6IP4,ARL6IP4	-6740,-7189,-1663,-1663,-1663,-1663
chr4:24960889-24961559	chr4	+	24960950	24961606	True	NM_003102,NM_173463	chr4,chr4	+,-	SOD3,CCDC149	-163923,20278
chr3:193943231-193944270	chr3	+	193943281	193944286	True	NR_024480,NM_005524	chr3,chr3	-,+	LOC100131551,HES1	86358,-89401
chr5:10617885-10618445	chr5	+	10618051	10618479	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-53667,142958
chr9:36137226-36137494	chr9	+	36137281	36137477	True	NM_001190383,NM_022343	chr9,chr9	-,+	GNE,GLIPR2	121069,-590
chr12:54894201-54895564	chr12	+	54894312	54894893	True	NM_005337,NM_144594,NM_001184976	chr12,chr12,chr12	+,-,+	NCKAP1L,GTSF1,NCKAP1L	-2875,-26926,-1802
chr4:146031907-146032441	chr4	+	146031934	146032386	True	NM_002940,NM_014885	chr4,chr4	+,-	ABCE1,ANAPC10	-12838,-12566
chr2:217357525-217358715	chr2	+	217357569	217358674	True	NM_000998,NM_020814	chr2,chr2	+,-	RPL37A,MARCH4	4845,-120819
chr12:132311433-132311743	chr12	+	132311730	132311792	True	NM_175066,NM_016155	chr12,chr12	-,+	DDX51,MMP17	317138,1148
chr11:35163300-35164930	chr11	+	35163558	35164932	True	NM_001001390,NM_001001391,NM_001001392,NM_000610,NM_001202555,NM_001202557,NM_001202556,NM_015957,NM_001001389	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,+,+,-,+	CD44,CD44,CD44,CD44,CD44,CD44,CD44,APIP,CD44	-3192,-3192,-3192,-3192,-3192,-3192,-3192,-225619,-3192
chr17:21032037-21032550	chr17	+	21032248	21032530	True	NR_024547,NM_015510	chr17,chr17	-,+	TMEM11,DHRS7B	85428,-2041
chr2:242752337-242752600	chr2	+	242752392	242752572	True	NM_001167599,NM_005018,NM_080741,NM_001167601,NM_001167600,NM_001167602	chr2,chr2,chr2,chr2,chr2,chr2	+,-,+,+,+,+	NEU4,PDCD1,NEU4,NEU4,NEU4,NEU4	-413,48536,-413,-2283,-2283,-413
chr2:120772316-120772757	chr2	+	120772377	120772503	True	NM_020909,NM_001184937,NM_001184938,NM_001184939,NR_000034	chr2,chr2,chr2,chr2,chr2	+,+,+,+,-	EPB41L5,EPB41L5,EPB41L5,EPB41L5,TMEM185B	-1824,-1824,-1643,-1824,208531
chr1:202442973-202443534	chr1	+	202443003	202443371	True	NM_014176,NM_032104	chr1,chr1	-,+	UBE2T,PPP1R12B	-131909,-11184
chr16:80836564-80836872	chr16	+	80836584	80836912	True	NM_152342,NM_018455	chr16,chr16	-,+	CDYL2,CENPN	1313,203190
chr22:46660832-46662828	chr22	+	46662314	46662744	True	NM_006071,NM_017931	chr22,chr22	-,+	PKDREJ,TTC38	-3095,1116
chr6:6677932-6678880	chr6	+	6678118	6678700	True	NM_004271,NR_026970	chr6,chr6	+,-	LY86,LY86-AS1	-89236,-55059
chr17:2615873-2616139	chr17	+	2615909	2616095	True	NM_015229,NM_001100398	chr17,chr17	-,+	KIAA0664,RAP1GAP2	-982,83636
chr4:48846487-48848485	chr4	+	48846799	48848429	True	NM_001014446,NM_001168254	chr4,chr4	-,+	OCIAD2,OCIAD1	60436,-13538
chr9:5958575-5960281	chr9	+	5958708	5960012	True	NM_001017969,NM_005511	chr9,chr9	-,+	KIAA2026,MLANA	48053,-67855
chr3:52187224-52187956	chr3	+	52187227	52187917	True	NM_015426,NM_199166,NM_001161580,NM_001161581	chr3,chr3,chr3,chr3	-,+,-,-	POC1A,ALAS1,POC1A,POC1A	839,44198,839,839
chr2:233793537-233793761	chr2	+	233793537	233793723	True	NM_001114090,NM_206895	chr2,chr2	-,+	NGEF,C2orf82	-676,-58594
chr19:13103857-13104378	chr19	+	13104324	13104414	True	NM_002501,NM_052850	chr19,chr19	+,-	NFIX,GADD45GIP1	2169,-36274
chrX:50029458-50030344	chrX	+	50029969	50030252	True	NM_003886,NM_033031,NM_033670	chrX,chrX,chrX	-,+,+	AKAP4,CCNB3,CCNB3	-64305,-2493,-2493
chr12:80855076-80856424	chr12	+	80855417	80855831	True	NR_030348,NM_001145026	chr12,chr12	-,+	MIR617,PTPRQ	370627,-17344
chr6:144282923-144284591	chr6	+	144283015	144284597	True	NM_001013623,NM_001080952	chr6,chr6	+,-	C6orf94,PLAGL1	-97493,44994
chr3:44795610-44796063	chr3	+	44795687	44796083	True	NM_020242,NM_020696	chr3,chr3	+,-	KIF15,KIAA1143	7125,7140
chr3:186501322-186501587	chr3	+	186501340	186501562	True	NR_002989,NM_001967,NR_002588,NR_031650,NM_002916,NR_002587,NR_002586	chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,-,+,+	SNORA81,EIF4A2,SNORA4,MIR1248,RFC4,SNORD2,SNORA63	2901,-30,3839,2898,22778,1022,3525
chr2:27603081-27603398	chr2	+	27603152	27603250	True	NM_001201459,NM_015636,NM_001034116,NM_014748,NM_144631	chr2,chr2,chr2,chr2,chr2	-,-,-,+,-	ZNF513,EIF2B4,EIF2B4,SNX17,ZNF513	111,-9828,-9828,-9814,411
chr3:187009490-187010146	chr3	+	187009533	187010137	True	NM_001879,NM_139125,NR_033519,NM_022147,NM_001031849	chr3,chr3,chr3,chr3,chr3	-,-,-,+,-	MASP1,MASP1,MASP1,RTP4,MASP1	141,141,141,76030,141
chr8:60028648-60029700	chr8	+	60028678	60029621	True	NM_005625,NM_014729	chr8,chr8	+,-	SDCBP,TOX	-563008,2205
chr16:15529486-15530381	chr16	+	15529533	15529873	True	NM_033201,NM_001184998	chr16,chr16	+,-	C16orf45,KIAA0430	-1259,207200
chr14:103014573-103015959	chr14	+	103014779	103015507	True	NM_152326,NR_036192	chr14,chr14	-,+	ANKRD9,MIR4309	-38651,-8852
chr17:41984999-41985206	chr17	+	41985051	41985237	True	NR_026770,NM_005374	chr17,chr17	+,-	C17orf88,MPP2	9338,62
chr8:38088800-38089043	chr8	+	38088813	38088939	True	NM_001164232,NM_015214,NM_001164234,NM_001102559	chr8,chr8,chr8,chr8	+,+,+,-	DDHD2,DDHD2,DDHD2,PPAPDC1B	531,69,69,37849
chr4:99227455-99229163	chr4	+	99227457	99229091	True	NM_021159,NM_174952	chr4,chr4	+,-	RAP1GDS1,C4orf37	-44981,-163066
chr1:38025602-38027167	chr1	+	38026275	38027199	True	NM_024700,NM_003462	chr1,chr1	-,+	SNIP1,DNALI1	-6372,-3806
chr13:101188131-101188609	chr13	+	101188258	101188650	True	NM_001178004,NM_033110	chr13,chr13	+,-	PCCA,A2LD1	-447048,-2202
chr20:61338703-61339102	chr20	+	61338766	61339100	True	NM_002531,NR_024470	chr20,chr20	+,-	NTSR1,LOC100127888	1088,-40793
chr20:43596153-43596512	chr20	+	43596177	43596526	True	NM_006809,NM_006282	chr20,chr20	-,+	TOMM34,STK4	-7063,-1108
chr19:39695419-39696466	chr19	+	39695492	39696446	True	NM_001080468,NM_001001414	chr19,chr19	-,+	SYCN,NCCRP1	-586,-7940
chr13:30425795-30426607	chr13	+	30425950	30426564	True	NM_007106,NR_033889	chr13,chr13	-,+	UBL3,LOC440131	-1130,84103
chr18:49867528-49867952	chr18	+	49867687	49867945	True	NM_005215,NM_016626	chr18,chr18	+,-	DCC,MEX3C	-1196,-1143636
chrX:48456591-48457158	chrX	+	48456601	48457155	True	NM_001166426,NM_017883,NM_033518,NR_029427	chrX,chrX,chrX,chrX	+,+,-,+	WDR13,WDR13,SLC38A5,WDR13	-428,-772,-127957,-772
chr9:37637053-37637279	chr9	+	37637068	37637284	True	NM_014907,NM_001134485	chr9,chr9	+,-	FRMPD1,TOMM5	13767,-44432
chr11:129815551-129816035	chr11	+	129815572	129815863	True	NR_024233,NM_199439,NM_199438	chr11,chr11,chr11	+,-,-	NCRNA00167,PRDM10,PRDM10	56655,1711,1711
chr20:57873149-57873498	chr20	+	57873232	57873508	True	NR_037930,NM_207033,NM_207032,NM_000114,NM_207034	chr20,chr20,chr20,chr20,chr20	-,+,+,+,+	SLMO2-ATP5E,EDN3,EDN3,EDN3,EDN3	-255331,1990,1990,1990,1990
chr2:198510672-198511493	chr2	+	198510834	198511498	True	NM_144629,NM_138395	chr2,chr2	-,+	RFTN2,MARS2	29142,58529
chr3:15005136-15006180	chr3	+	15005249	15005968	True	NM_022497,NM_003298	chr3,chr3	-,+	MRPS25,NR2C2	100899,-16072
chr22:25027747-25028400	chr22	+	25027814	25028218	True	NR_024593,NR_024494	chr22,chr22	-,+	POM121L10P,BCRP3	26946,663
chr3:126708394-126709991	chr3	+	126708536	126710034	True	NM_032242,NM_052883	chr3,chr3	+,-	PLXNA1,TXNRD3	-1150,-334569
chr2:100748466-100750114	chr2	+	100748534	100749825	True	NM_002285,NM_001011717	chr2,chr2	-,+	AFF3,NMS	9271,337118
chr11:66742825-66743028	chr11	+	66742954	66743030	True	NM_001136485,NM_001040716	chr11,chr11	+,-	C11orf86,PC	-251,-17107
chr8:141522520-141523348	chr8	+	141522594	141523387	True	NR_023360,NM_031466,NM_017444	chr8,chr8,chr8	+,-,+	CHRAC1,TRAPPC9,CHRAC1	-1231,-53916,-1245
chr6:10552394-10553846	chr6	+	10552414	10553829	True	NR_027793,NM_001491	chr6,chr6	-,+	C6orf218,GCNT2	-117359,2119
chr1:46667091-46669003	chr1	+	46667661	46668959	True	NM_001013615,NM_017739	chr1,chr1	+,-	C1orf190,POMGNT1	46,-3540
chr2:130735487-130737301	chr2	+	130735903	130737323	True	NR_036537,NM_032144	chr2,chr2	-,+	LOC100131320,RAB6C	772,-89
chr12:55044456-55044698	chr12	+	55044467	55044658	True	NM_053283,NM_001165975	chr12,chr12	-,+	DCD,PDE1B	-2318,-89420
chr12:109747884-109748727	chr12	+	109748024	109748581	True	NM_213596,NM_001101421	chr12,chr12	-,+	FOXN4,MYO1H	-999,77942
chr17:4888335-4889012	chr17	+	4888531	4888711	True	NM_006612,NM_001171168,NM_001171167,NM_001171166,NM_015099	chr17,chr17,chr17,chr17,chr17	+,-,-,-,-	KIF1C,CAMTA2,CAMTA2,CAMTA2,CAMTA2	12531,2004,2004,2299,2299
chr6:35424382-35425271	chr6	+	35424615	35425241	True	NM_003214,NM_021922	chr6,chr6	-,+	TEAD3,FANCE	39670,-4529
chr5:849716-850272	chr5	+	849915	850225	True	NM_001166260,NM_024786	chr5,chr5	+,-	TRIP13,ZDHHC11	42743,926
chr19:33213183-33213744	chr19	+	33213187	33213504	True	NM_001110822,NM_032139	chr19,chr19	+,-	TDRD12,ANKRD27	-2559,-47085
chr1:207071675-207072526	chr1	+	207071692	207072574	True	NM_001185157,NM_001185156,NM_001185158,NM_006850,NM_001193338	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	IL24,IL24,IL24,IL24,FAIM3	-955,-955,-955,-955,22711
chr1:226374530-226375446	chr1	+	226374827	226375321	True	NM_022735,NM_031944	chr1,chr1	-,+	ACBD3,MIXL1	-404,36061
chr1:112161733-112162181	chr1	+	112161840	112162146	True	NM_002884,NM_001010935,NR_034126	chr1,chr1,chr1	+,+,-	RAP1A,RAP1A,LOC100129269	258,258,-10900
chr22:38599393-38599765	chr22	+	38599543	38599809	True	NM_001161573,NM_001161572,NM_001161574,NM_012323,NM_001199562	chr22,chr22,chr22,chr22,chr22	+,+,+,+,-	MAFF,MAFF,MAFF,MAFF,PLA2G6	-567,-1655,-1655,-1655,-21707
chr8:76471132-76471630	chr8	+	76471166	76471465	True	NM_004133,NR_024360	chr8,chr8	+,-	HNF4G,LOC100192378	-19014,1124106
chr1:158978887-158980532	chr1	+	158978913	158980561	True	NM_004833,NM_005531	chr1,chr1	-,+	AIM2,IFI16	66136,-80
chrX:48541804-48542270	chrX	+	48541836	48542196	True	NM_013271,NM_000377	chrX,chrX	-,+	PCSK1N,WAS	151814,-11
chr6:83075016-83075253	chr6	+	83075051	83075187	True	NM_006670,NM_001166392,NM_015525	chr6,chr6,chr6	+,+,-	TPBG,TPBG,IBTK	-2179,-1141,-117603
chr19:57859176-57859575	chr19	+	57859361	57859623	True	NM_020633,NM_020657	chr19,chr19	-,+	VN1R1,ZNF304	108534,3021
chr7:112059838-112060809	chr7	+	112060307	112060745	True	NM_001007245,NM_014705,NM_001197080	chr7,chr7,chr7	+,-,+	IFRD1,DOCK4,IFRD1	2453,-213845,2453
chr15:91778772-91779150	chr15	+	91778790	91779188	True	NM_014848,NM_018668	chr15,chr15	+,-	SV2B,VPS33B	-135317,-212957
chr22:34318082-34318307	chr22	+	34318089	34318355	True	NM_133642,NM_000362,NM_004737	chr22,chr22,chr22	-,+,-	LARGE,TIMP3,LARGE	-1673,-1121338,-1673
chr5:140589094-140589634	chr5	+	140589273	140589681	True	NM_018932,NM_018933,NM_031947,NM_018931	chr5,chr5,chr5,chr5	+,+,-,+	PCDHB12,PCDHB13,SLC25A2,PCDHB11	-1035,3827,93987,-9978
chr7:150039015-150039459	chr7	+	150039159	150039495	True	NM_138434,NM_002889	chr7,chr7	+,-	C7orf29,RARRES2	-12272,-396
chr9:115448-117177	chr2	-	114257891	114257941	True	NM_012184,NR_024005	chr2,chr2	+,-	FOXD4L1,DDX11L2	-1281,101262
chr2:201640185-201641848	chr2	+	201640210	201641819	True	NM_014670,NR_037886	chr2,chr2	+,-	BZW1,LOC100507140	34827,-40310
chrY:14532811-14533168	chrY	+	14532993	14533147	True	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	241150,292
chr10:70934761-70935714	chr10	+	70934770	70935766	True	NM_001057,NM_003171	chr10,chr10	-,+	TACR2,SUPV3L1	240961,4226
chr1:173616054-173617172	chr1	+	173616053	173616918	True	NM_001195190,NM_198493	chr1,chr1	+,-	LOC730159,ANKRD45	-11449,22134
chr19:42189028-42189846	chr19	+	42189064	42189784	True	NM_004363,NM_006890	chr19,chr19	+,-	CEACAM5,CEACAM7	22745,2362
chr3:195869792-195870064	chr3	+	195869848	195870038	True	NR_034088,NM_001128148	chr3,chr3	+,-	LOC401109,TFRC	-392,-60816
chr16:70323152-70323410	chr16	+	70323286	70323458	True	NM_001014451,NM_001014449,NM_007242,NM_001605	chr16,chr16,chr16,chr16	+,+,+,-	DDX19B,DDX19B,DDX19B,AARS	9613,9613,9613,4
chr6:111140414-111141733	chr6	+	111140692	111141354	True	NM_001634,NM_015076	chr6,chr6	+,-	AMD1,CDK19	54632,-4280
chr16:67930536-67931050	chr16	+	67930562	67931079	True	NM_006742,NM_001907	chr16,chr16	+,-	PSKH1,CTRL	-3438,34750
chr1:33354915-33355909	chr1	+	33355062	33355921	True	NM_033504,NM_002143	chr1,chr1	-,+	TMEM54,HPCA	11089,-3023
chr12:97075670-97076444	chr12	+	97075678	97076495	True	NM_002595,NM_001135176	chr12,chr12	-,+	CDK17,NEDD1	-281312,224505
chr15:44036606-44037131	chr15	+	44036677	44037053	True	NR_002318,NM_005313	chr15,chr15	-,+	CATSPER2P1,PDIA3	1493,1536
chr2:202046062-202047238	chr2	+	202046568	202047125	True	NM_001230,NM_032977,NM_032974,NM_173822	chr2,chr2,chr2,chr2	+,+,+,-	CASP10,CASP10,CASP10,FAM126B	495,495,495,-110176
chr15:78727507-78728228	chr15	+	78727597	78728077	True	NM_025234,NM_004136	chr15,chr15	-,+	WDR61,IREB2	-135657,2440
chr6:33288330-33288802	chr6_qbl_hap6	+	4520586	4521086	False	NM_001145338,NM_001350,NM_172208,NM_001185181,NM_005453,NM_172209,NM_001141970,NM_003190,NM_001141969	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,TAPBP,PFDN6,ZBTB22,TAPBP,DAXX,TAPBP,DAXX	-2620,2006,-6176,-30982,-2827,-6176,2006,-6176,2006
chr6:33288330-33288802	chr6_mcf_hap5	+	4762079	4762579	False	NM_001145338,NM_001350,NM_172208,NM_001185181,NM_005453,NM_172209,NM_001141970,NM_003190,NM_001141969	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,TAPBP,PFDN6,ZBTB22,TAPBP,DAXX,TAPBP,DAXX	-2617,2006,-6173,-30974,-2824,-6173,2006,-6173,2006
chr6:33288330-33288802	chr6_cox_hap2	+	4732153	4732653	False	NM_001145338,NM_001350,NM_172208,NM_001185181,NM_005453,NM_172209,NM_001141970,NM_003190,NM_001141969	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,TAPBP,PFDN6,ZBTB22,TAPBP,DAXX,TAPBP,DAXX	-2619,2008,-6177,-30978,-2826,-6177,2008,-6177,2008
chr6:33288330-33288802	chr6	+	33288337	33288837	True	NR_024517,NM_001350,NM_001145338,NM_172208,NM_001185181,NM_005453,NM_172209,NM_001141970,NM_003190,NM_001141969	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,-,+,-,-,-,-,-	DAXX,DAXX,ZBTB22,TAPBP,PFDN6,ZBTB22,TAPBP,DAXX,TAPBP,DAXX	2006,2006,-2618,-6173,-30976,-2825,-6173,2006,-6173,2006
chr6:33288330-33288802	chr6_dbb_hap3	+	4569662	4570162	False	NM_001145338,NM_001350,NM_172208,NM_001185181,NM_005453,NM_172209,NM_001141970,NM_003190,NM_001141969	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	-,-,-,+,-,-,-,-,-	ZBTB22,DAXX,TAPBP,PFDN6,ZBTB22,TAPBP,DAXX,TAPBP,DAXX	-2619,2008,-6175,-30975,-2826,-6175,2008,-6175,2008
chr3:174571022-174572922	chr3	+	174571233	174572975	True	NM_207015,NM_031955	chr3,chr3	+,-	NAALADL2,SPATA16	4135,-1712175
chr19:43174566-43174900	chr19	+	43174677	43174947	True	NR_036584,NM_021016	chr19,chr19	+,-	LOC100289650,PSG3	151067,69771
chr15:52308508-52310383	chr15	+	52308772	52310177	True	NM_138792,NM_002748	chr15,chr15	-,+	LEO1,MAPK6	-44814,1233
chr20:1181062-1181417	chr20	+	1181097	1181273	True	NM_018354,NM_001009612	chr20,chr20	-,+	C20orf46,C20orf202	-15980,2824
chr5:10666096-10667739	chr5	+	10666410	10667718	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-102026,93719
chr22:45064946-45065310	chr22	+	45065004	45065064	True	NM_032287,NM_001198721,NM_001017528,NM_001017529,NM_001017530,NM_015366	chr22,chr22,chr22,chr22,chr22,chr22	-,+,+,+,+,+	LDOC1L,PRR5,PRR5,PRR5,PRR5,PRR5	-170999,7623,-628,-628,7623,7623
chr14:95267451-95268898	chr14	+	95267539	95268409	True	NR_015340,NM_173849	chr14,chr14	+,-	SERPINA13,GSC	-160528,-31040
chrY:16637140-16637373	chrY	+	16637156	16637422	True	NR_028318,NR_028319,NM_004679,NM_014893	chrY,chrY,chrY,chrY	+,+,-,+	NLGN4Y,NLGN4Y,VCY,NLGN4Y	-2719,-753,-538764,-1581
chrX:103411365-103411577	chrX	+	103411454	103411514	True	NM_001012755,NM_207318	chrX,chrX	-,+	MCART6,FAM199X	-9746,-204
chr15:34269651-34270584	chr15	+	34269673	34270520	True	NM_012125,NM_020371	chr15,chr15	+,-	CHRM5,AVEN	-8635,60833
chr11:44971305-44971550	chr11	+	44971305	44971559	True	NM_006034,NR_026681,NM_001076787	chr11,chr11,chr11	-,+,-	TP53I11,LOC221122,TP53I11	1099,23893,1099
chr16:53501593-53502239	chr16	+	53501780	53502173	True	NM_001012398,NM_005611	chr16,chr16	-,+	AKTIP,RBL2	35056,-33487
chr6:114180290-114180783	chr6	+	114180373	114180601	True	NM_001527,NM_002356	chr6,chr6	-,+	HDAC2,MARCKS	111808,-1903
chr16:28075287-28075777	chr16	+	28075425	28075799	True	NM_001024401,NM_001109763	chr16,chr16	+,-	SBK1,GSG1L	228040,-595
chr1:159871237-159871561	chr1	+	159871276	159871417	True	NM_012337,NM_020125	chr1,chr1	-,+	CCDC19,SLAMF8	-1370,-74849
chr7:32980386-32981352	chr7	+	32980733	32981131	True	NM_007270,NR_003500	chr7,chr7	+,-	FKBP9,RP9P	15873,1702
chr14:102091244-102092719	chr14	+	102091482	102092754	True	NR_031649,NM_001362	chr14,chr14	-,+	MIR1247,DIO3	-64723,-63845
chr6:153447480-153448112	chr6	+	153447557	153447943	True	NM_194435,NM_012419	chr6,chr6	+,-	VIP,RGS17	-375676,4506
chr21:45711879-45712238	chr21	+	45712077	45712195	True	NR_024108,NM_000658,NM_000383,NM_175867,NM_002626	chr21,chr21,chr21,chr21,chr21	+,+,+,-,+	PFKL,AIRE,AIRE,DNMT3L,PFKL	7729,-1854,-6365,-29978,7734
chr19:10543866-10544315	chr19	+	10543871	10544315	True	NM_007065,NM_001111309,NM_001111308	chr19,chr19,chr19	-,+,+	CDC37,PDE4A,PDE4A	-29600,-811,-2401
chr7:56127620-56129195	chr7	+	56127870	56128858	True	NM_001762,NM_001130069,NM_004577,NM_001042469,NM_001146333,NM_015411,NR_002957,NM_001042470,NM_001009186	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,+,-,+,+,+,+,+,+	CCT6A,SUMF2,PSPH,SUMF2,SUMF2,SUMF2,SNORA15,SUMF2,CCT6A	-8550,3058,-8602,3058,3058,3058,-39,3058,-8550
chr17:73662586-73663026	chr17	+	73662631	73663024	True	NM_001003716,NM_004259,NM_001003715,NM_013260	chr17,chr17,chr17,chr17	-,-,-,+	RECQL5,RECQL5,RECQL5,SAP30BP	295,291,295,374
chr9:140444130-140444902	chr9	+	140444250	140444920	True	NM_032477,NM_152286,NM_001098537	chr9,chr9,chr9	+,-,-	MRPL41,PNPLA7,PNPLA7	1388,116,116
chr6:167422114-167422920	chr6	+	167422251	167422474	True	NR_037504,NM_194429,NM_007045	chr6,chr6,chr6	-,+,+	MIR3939,FGFR1OP,FGFR1OP	-10851,-9486,-9486
chr11:58940174-58940669	chr11	+	58940233	58940603	True	NM_001039396,NM_015177	chr11,chr11	-,+	MPEG1,DTX4	39941,-472
chr18:43914378-43915110	chr18	+	43914474	43915016	True	NM_001173129,NM_152470	chr18,chr18	-,+	LOXHD1,RNF165	184083,-338
chr17:75285783-75286430	chr17	+	75285958	75286281	True	NM_001113492,NM_001113491,NR_036200	chr17,chr17,chr17	+,+,-	SEPT9,SEPT9,MIR4316	-2047,-8528,106906
chr4:106394111-106394438	chr4	+	106394117	106394487	True	NR_003586,NM_176869,NM_006903,NM_176867,NM_176866	chr4,chr4,chr4,chr4,chr4	+,-,-,-,-	EEF1A1P9,PPA2,PPA2,PPA2,PPA2	11375,790,790,790,790
chr9:37465094-37465526	chr9	+	37465286	37465472	True	NM_022490,NM_014872	chr9,chr9	+,-	POLR1E,ZBTB5	20472,-1
chr12:125348523-125349548	chr12	+	125348820	125349252	True	NM_005505,NM_080626,NM_001082959	chr12,chr12,chr12	-,+,-	SCARB1,BRI3BP,SCARB1	-301,128941,-301
chr19:5456677-5457022	chr19	+	5456812	5457060	True	NM_181710,NR_027064	chr19,chr19	+,-	ZNRF4,PLAC2	-1443,110995
chr2:160761356-160761673	chr2	+	160761416	160761624	True	NM_001198760,NM_002349,NM_001198759,NM_022826	chr2,chr2,chr2,chr2	-,-,-,+	LY75-CD302,LY75,LY75-CD302,MARCH7	-149,-149,-149,-192457
chr22:22303802-22304081	chr22	+	22303880	22304078	True	NM_148176,NM_014634	chr22,chr22	+,-	PPIL2,PPM1F	-283658,3222
chr1:9968713-9969702	chr1	+	9968941	9969671	True	NM_022787,NM_001012329,NM_020248	chr1,chr1,chr1	+,-,-	NMNAT1,CTNNBIP1,CTNNBIP1	33814,695,695
chrX:152991756-152992062	chrX	+	152991889	152991955	True	NM_001139441,NM_001139457,NM_000033,NM_005745,NR_024450	chrX,chrX,chrX,chrX,chrX	-,-,+,-,-	BCAP31,BCAP31,ABCD1,BCAP31,BCAP31	-2307,-2340,-1617,-2051,-1688
chr6:15031458-15032686	chr6	+	15031782	15032619	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	213907,630728
chr8:120847669-120848080	chr8	+	120847804	120848104	True	NM_003184,NM_022783	chr8,chr8	-,+	TAF2,DEPTOR	-2730,37795
chr22:46643645-46644038	chr22	+	46643650	46644024	True	NM_207327,NM_017931	chr22,chr22	-,+	C22orf40,TTC38	2219,19836
chr7:75676299-75676730	chr7	+	75676609	75676731	True	NM_016086,NM_005918	chr7,chr7	-,+	STYXL1,MDH2	640,661
chr6:111928311-111928754	chr6	+	111928351	111928497	True	NM_001164281,NR_028338,NM_147686,NR_034109	chr6,chr6,chr6,chr6	-,-,-,+	TRAF3IP2,TRAF3IP2,TRAF3IP2,LOC643749	-877,-877,-877,-123727
chr22:41776787-41776994	chr22	+	41776821	41777007	True	NM_003216,NM_016272	chr22,chr22	+,-	TEF,TOB2	955,66070
chr8:37298717-37300429	chr8	+	37299022	37299892	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	253408,305737
chr17:27718333-27719156	chr17	+	27718373	27718809	True	NM_025142,NM_020791,NM_020772	chr17,chr17,chr17	+,+,-	TAOK1,TAOK1,NUFIP2	-481,-481,-97207
chr7:92463446-92463714	chr7	+	92463573	92463731	True	NM_001259,NR_026902,NM_001145306	chr7,chr7,chr7	-,+,-	CDK6,MGC16142,CDK6	-342,-295843,2260
chrX:48366922-48367164	chrX	+	48367096	48367170	True	NM_203475,NM_203474,NM_033518,NM_022825,NM_203473	chrX,chrX,chrX,chrX,chrX	+,+,-,+,+	PORCN,PORCN,SLC38A5,PORCN,PORCN	1001,1001,-38452,200,200
chr1:182992889-182993089	chr1	+	182992988	182993084	True	NM_030933,NM_002293	chr1,chr1	-,+	SHCBP1L,LAMC1	-70435,-444
chr14:76454109-76455154	chr14	+	76454113	76455199	True	NM_001102564,NM_052873,NM_003239	chr14,chr14,chr14	+,+,-	C14orf179,C14orf179,TGFB3	-2071,-2071,-6021
chr6:7986214-7986610	chr6	+	7986321	7986567	True	NM_030810,NR_027712	chr6,chr6	-,+	TXNDC5,PIP5K1P1	-75274,-37
chr8:145723977-145724958	chr8	+	145724120	145724844	True	NM_032902,NM_005309,NM_138431,NM_004260	chr8,chr8,chr8,chr8	+,+,+,-	PPP1R16A,GPT,MFSD3,RECQL4	-2062,4620,9707,18416
chr2:46822080-46823275	chr2	+	46822221	46823081	True	NM_002643,NM_014171	chr2,chr2	-,+	PIGF,CRIPT	21228,21243
chr1:33547983-33548333	chr1	+	33548017	33548307	True	NR_037592,NM_052998	chr1,chr1	-,+	AK2,ADC	-45505,-1354
chr10:73633193-73633425	chr10	+	73633302	73633448	True	NM_001171936,NM_002778	chr10,chr10	+,-	CDH23,PSAP	-61713,-22220
chr2:175548023-175548813	chr2	+	175548215	175548487	True	NM_024583,NM_001077269	chr2,chr2	+,-	SCRN3,WIPF1	-287809,-588
chr6:34203780-34204292	chr6	+	34203905	34204241	True	NM_002131,NM_145899,NM_001008703,NM_145902,NM_145903,NM_145901,NM_145905	chr6,chr6,chr6,chr6,chr6,chr6,chr6	+,+,-,+,+,+,+	HMGA1,HMGA1,C6orf1,HMGA1,HMGA1,HMGA1,HMGA1	335,335,12713,408,335,408,2326
chr16:86598171-86599109	chr16	+	86598171	86599015	True	NM_001159380,NM_001159378,NM_001159379,NR_027490,NR_027489,NM_022764,NM_001159377,NM_005251,NR_026674	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	-,-,-,-,-,-,-,+,+	MTHFSD,MTHFSD,MTHFSD,MTHFSD,MTHFSD,MTHFSD,MTHFSD,FOXC2,FLJ30679	-9362,-9330,-9330,-9330,-9330,-9330,-9330,1841,-9296
chr6:44096959-44097876	chr6	+	44097141	44097868	True	NM_018426,NM_032111	chr6,chr6	+,-	TMEM63B,MRPL14	-1820,-1950
chr1:153598861-153599245	chr1	+	153598879	153599277	True	NM_015607,NM_001024211,NM_001024212,NM_001024213,NM_006271,NM_001024210,NM_005979	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,-,+,-,-	CHTOP,S100A13,S100A13,S100A13,S100A1,S100A13,S100A13	7247,890,517,297,1595,7341,1488
chr1:155948345-155948616	chr1	+	155948419	155948637	True	NM_001162383,NM_004723,NM_181885,NM_001162384	chr1,chr1,chr1,chr1	-,-,+,-	ARHGEF2,ARHGEF2,RXFP4,ARHGEF2	-83,-453,-36990,-83
chr9:42368699-42369131	chr9	+	42368874	42368961	True	NR_003670,NM_001012419,NM_001012421	chr9,chr9,chr9	-,+,+	KGFLP2,ANKRD20A3,ANKRD20A2	-349290,-626,-626
chr9:42368699-42369131	chr9	-	43132885	43132972	False	NM_001012419,NR_026558,NM_001012421	chr9,chr9,chr9	-,+,-	ANKRD20A3,AQP7P3,ANKRD20A2	626,-274789,626
chr9:42368699-42369131	chr9	+	67927356	67927419	False	NR_027422,NM_001012419,NM_032250	chr9,chr9,chr9	-,+,+	FAM27B,ANKRD20A3,ANKRD20A1	-133167,-651,-651
chr9:42368699-42369131	chr9	+	69382552	69382639	False	NM_001085457,NM_001098805	chr9,chr9	-,+	CBWD6,ANKRD20A4	-119959,-626
chr17:57967303-57968789	chr17	+	57967501	57968415	True	NM_001193611,NM_001193610,NM_001193613,NM_001193612,NM_001193609,NM_016261,NM_003161	chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,-,+	TUBD1,TUBD1,TUBD1,TUBD1,TUBD1,TUBD1,RPS6KB1	1948,1948,1948,1948,1948,1948,2027
chr19:48392704-48393385	chr19	+	48392881	48393226	True	NM_003167,NR_004437	chr19,chr19	-,+	SULT2A1,SNAR-A12	-3227,17708
chr12:8847283-8847806	chr12	+	8847330	8847764	True	NM_003480,NM_020734	chr12,chr12	-,+	MFAP5,RIMKLB	-31897,2753
chr16:50774004-50775669	chr16	+	50774375	50775509	True	NM_001042355,NM_001042412,NM_015247,NM_182854	chr16,chr16,chr16,chr16	+,+,+,-	CYLD,CYLD,CYLD,SNX20	451,519,451,-59111
chr3:23243914-23244220	chr3	+	23244004	23244267	True	NM_020345,NM_152653	chr3,chr3	-,+	NKIRAS1,UBE2E2	714320,516
chr7:101988526-101989167	chr7	+	101988758	101988950	True	NM_024653,NM_001146210	chr7,chr7	+,-	PRKRIP1,SPDYE6	47853,7989
chr7:101988526-101989167	chr7	-	102201213	102201405	False	NM_001031618,NM_001166339,NM_001097615	chr7,chr7,chr7	+,+,-	SPDYE2,SPDYE2L,POLR2J3	-9585,-9585,11713
chr7:101988526-101989167	chr7	-	102300303	102300495	False	NM_032959,NM_001031618,NM_001166339	chr7,chr7,chr7	-,+,+	POLR2J2,SPDYE2,SPDYE2L	11737,-9582,-9582
chr4:123299363-123299632	chr4	+	123299478	123299665	True	NM_000586,NM_139243,NM_001159295,NM_001159285	chr4,chr4,chr4,chr4	-,+,+,+	IL2,ADAD1,ADAD1,ADAD1	78040,455,929,929
chr9:99067595-99068946	chr9	+	99067718	99068964	True	NM_014282,NM_000197	chr9,chr9	+,-	HABP4,HSD17B3	143449,-3284
chr11:84633395-84633708	chr11	+	84633406	84633707	True	NM_001364,NM_001193537	chr11,chr11	-,+	DLG2,TMEM126B	809,705914
chr5:768485-768915	chr5	+	768709	768895	True	NM_001166260,NM_007030	chr5,chr5	+,-	TRIP13,TPPP	124073,-75199
chr5:768485-768915	chr5	+	879668	879854	False	NM_001009877,NM_001166260	chr5,chr5	-,+	BRD9,TRIP13	12870,13114
chr8:104163080-104163404	chr8	+	104163113	104163241	True	NR_036106,NR_027071	chr8,chr8	+,-	MIR3151,C8orf56	3600,-9543
chr22:51222149-51222423	chr22	+	51222236	51222438	True	NM_001003789,NM_001130919,NM_001130920,NM_001130921,NM_001130922,NM_001130923	chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,-,-	RABL2B,RABL2B,RABL2B,RABL2B,RABL2B,RABL2B	-149,-149,-149,-149,-149,-149
chr22:51222149-51222423	chr2	-	114384468	114384544	False	NM_007082,NR_000029,NM_013412,NR_024529,NR_024528,NR_024530,NR_024531	chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,-,+,-,-,-,-	RABL2A,RPL23AP7,RABL2A,RPL23AP7,RPL23AP7,RPL23AP7,RPL23AP7	272,225,272,225,225,225,225
chr2:114648247-114648516	chr2	+	114648335	114648556	True	NM_005721,NR_034130	chr2,chr2	+,-	ACTR3,LOC100499194	-849,89058
chr16:31131050-31131663	chr16	+	31131321	31131699	True	NM_002773,NM_032188,NM_182958	chr16,chr16,chr16	-,+,+	PRSS8,MYST1,MYST1	15502,-2387,-2387
chrX:11233419-11233872	chrX	+	11233657	11233863	True	NM_001142,NM_013423	chrX,chrX	+,-	AMELX,ARHGAP6	77669,50282
chr1:42618223-42618871	chr1	+	42618282	42618856	True	NM_007102,NM_033553	chr1,chr1	+,-	GUCA2B,GUCA2A	235,11589
chr6:14668857-14670773	chr6	+	14669123	14670627	True	NM_001031713,NM_004233	chr6,chr6	-,+	CCDC90A,CD83	-854334,-551309
chr15:34322705-34323466	chr15	+	34323155	34323294	True	NM_020371,NM_012125	chr15,chr15	-,+	AVEN,CHRM5	8068,-62126
chr5:171615454-171615766	chr5	+	171615608	171615714	True	NM_005990,NM_001171183	chr5,chr5	-,+	STK10,EFCAB9	-262,5461
chr2:153032925-153033602	chr2	+	153032989	153033606	True	NM_052905,NM_005843	chr2,chr2	+,-	FMNL2,STAM2	158144,-483
chr10:11783888-11784149	chr10	+	11783909	11784175	True	NM_014688,NM_024693	chr10,chr10	-,+	USP6NL,ECHDC3	-130230,180
chr16:74644414-74646239	chr16	+	74644574	74645961	True	NM_002811,NM_001145667,NR_027265,NM_001145666,NR_027264,NM_012201	chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,-,-,-	PSMD7,GLG1,GLG1,GLG1,GLG1,GLG1	-313952,-3532,-3532,-3532,-3532,-3532
chr2:151342637-151342842	chr2	+	151342663	151342885	True	NM_007115,NM_005168	chr2,chr2	+,-	TNFAIP6,RND3	871220,1345
chr12:7282079-7282319	chr12	+	7282079	7282367	True	NM_014718,NM_031491	chr12,chr12	+,-	CLSTN3,RBP5	599,-613
chr5:160202846-160204601	chr5	+	160203123	160204645	True	NR_029701,NM_025153	chr5,chr5	+,-	MIR146A,ATP10B	-290816,74632
chr9:35069540-35070639	chr9	+	35069758	35070392	True	NM_007126,NM_203299,NM_004629	chr9,chr9,chr9	-,+,-	VCP,C9orf131,FANCG	2397,-27591,9671
chr11:2170466-2171096	chr11	+	2170570	2171134	True	NM_001127598,NR_028043,NR_028044,NM_001007139	chr11,chr11,chr11,chr11	-,+,+,-	IGF2,IGF2AS,IGF2AS,IGF2	-8229,-8863,-8863,39
chr17:6541770-6542416	chr17	+	6541836	6542464	True	NM_014804,NM_032731	chr17,chr17	-,+	KIAA0753,TXNDC17	1833,1757
chr1:6556961-6557266	chr1	+	6556988	6557050	True	NM_001042664,NM_020631,NM_138697,NM_001042663	chr1,chr1,chr1,chr1	-,-,+,-	PLEKHG5,PLEKHG5,TAS1R1,PLEKHG5	-6348,-5228,58287,484
chr6:111429151-111430068	chr6	+	111429641	111430108	True	NM_018593,NR_002932	chr6,chr6	+,-	SLC16A10,GSTM2P1	-20918,-60884
chr10:70092481-70092690	chr10	+	70092536	70092712	True	NM_001033083,NM_021644,NM_022129,NM_012207	chr10,chr10,chr10,chr10	-,+,-,+	PBLD,HNRNPH3,PBLD,HNRNPH3	22,-819,22,-819
chr19:53446051-53446724	chr19	+	53446195	53446750	True	NM_152473,NR_037805	chr19,chr19	+,-	HERV-V1,ZNF321	70593,-348
chr11:64359691-64360712	chr11	+	64359876	64360748	True	NM_153378,NM_144585,NM_138734	chr11,chr11,chr11	+,+,-	SLC22A12,SLC22A12,NRXN2	-1645,-1645,50089
chr1:3663314-3663610	chr1	+	3663351	3663645	True	NR_033709,NR_033708,NR_033710,NR_033711,NR_033712,NM_152492	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,+	KIAA0495,KIAA0495,KIAA0495,KIAA0495,KIAA0495,CCDC27	342,342,342,342,-16,5319
chr19:39421578-39422988	chr19	+	39421585	39422954	True	NM_017827,NM_001145901,NM_021107,NM_033362,NM_033363	chr19,chr19,chr19,chr19,chr19	-,-,+,+,+	SARS2,SARS2,MRPS12,MRPS12,MRPS12	-49,-49,-42,-288,-42
chr8:18625179-18625500	chr8	+	18625309	18625415	True	NM_000015,NM_206909	chr8,chr8	+,-	NAT2,PSD3	-376618,41046
chr17:7757285-7757497	chr17	+	7757397	7757457	True	NM_032356,NM_144607,NM_203411	chr17,chr17,chr17	-,+,+	LSMD1,CYB5D1,TMEM88	3765,3606,926
chr10:71557531-71557962	chr10	+	71557626	71558006	True	NM_080802,NM_080800,NM_001130103,NM_080801,NM_080798,NM_020999,NM_080805	chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,-,+	COL13A1,COL13A1,COL13A1,COL13A1,COL13A1,NEUROG3,COL13A1	3637,3637,3637,3637,3637,-224416,3637
chr11:17028097-17029279	chr11	+	17028243	17028786	True	NM_175058,NM_014267	chr11,chr11	-,+	PLEKHA7,C11orf58	7242,-268153
chr14:92573076-92573392	chr14	+	92573082	92573397	True	NM_001164776,NM_001164777,NR_028453,NR_028457,NR_028456,NR_028455,NR_028454,NM_001164778,NM_001164779,NR_028459,NR_028458,NR_028470,NM_017437,NR_031765,NM_001164781,NM_001164780,NM_001164782,NM_004993,NR_028468,NR_028469,NR_028466,NR_028467,NR_028464,NR_028465,NR_028462,NR_028463,NR_028460,NR_028461,NM_030660,NM_001127696,NM_001127697,NM_001164774	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	-,-,-,-,-,-,-,-,-,-,-,-,+,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-	ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,CPSF2,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3	-117,-117,-117,-117,-117,-117,-117,-117,-117,-117,-117,-117,14900,-117,-117,-117,-117,-117,-117,-117,-117,-117,-117,-117,-117,-117,-117,-117,-117,-117,-117,-117
chr14:102094528-102094812	chr14	+	102094539	102094653	True	NR_031649,NM_001362	chr14,chr14	-,+	MIR1247,DIO3	-67780,-66902
chr17:47491029-47491968	chr17	+	47491245	47491947	True	NM_002634,NM_002507	chr17,chr17	-,+	PHB,NGFR	345,80707
chr4:154125239-154125765	chr4	+	154125339	154125741	True	NR_001562,NM_015271	chr4,chr4	-,+	ANXA2P1,TRIM2	104272,-20
chr15:43563214-43565131	chr15	+	43563253	43563632	True	NM_201631,NM_001012969,NM_004245	chr15,chr15,chr15	-,+,-	TGM5,ADAL,TGM5	-4198,59239,-4198
chr6:14710403-14710944	chr6	+	14710402	14710984	True	NM_001031713,NM_004973	chr6,chr6	-,+	CCDC90A,JARID2	-895613,535542
chr13:41840985-41842138	chr13	+	41841327	41842168	True	NM_001110798,NM_004294	chr13,chr13	+,-	NAA16,MTRF1	43172,-3614
chr3:48937149-48937937	chr3	+	48937590	48937926	True	NM_006321,NM_000387	chr3,chr3	+,-	ARIH2,SLC25A20	18354,-1164
chrX:33229687-33229983	chrX	+	33229695	33229892	True	NM_004006,NM_152631	chrX,chrX	-,+	DMD,FAM47B	-22,1731020
chr16:616360-616825	chr16	+	616412	616868	True	NM_176677,NM_148920,NM_145270,NR_024121,NM_004204	chr16,chr16,chr16,chr16,chr16	+,+,+,-,+	NHLRC4,PIGQ,C16orf11,NCRNA00235,PIGQ	163,3135,-6041,-39005,3135
chr21:46824339-46824570	chr21	+	46824393	46824465	True	NM_130445,NR_028082	chr21,chr21	+,-	COL18A1,NCRNA00175	631,20540
chr9:37898631-37900368	chr9	+	37898844	37899845	True	NM_024345,NM_033412,NR_024873,NR_024872	chr9,chr9,chr9,chr9	+,-,-,-	DCAF10,MCART1,MCART1,MCART1	-98105,4556,4556,4556
chr8:103137108-103137583	chr8	+	103137198	103137602	True	NM_001040630,NM_001040627,NM_001040626,NM_001040625,NM_001040624,NM_001040629,NM_001040628,NM_024410	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,-,-,-,+	NCALD,NCALD,NCALD,NCALD,NCALD,NCALD,NCALD,ODF1	-63,-636,-636,-636,-636,-636,-636,426245
chr10:65661787-65662962	chr10	+	65661823	65662867	True	NM_032776,NM_001001330	chr10,chr10	-,+	JMJD1C,REEP3	-436101,-380752
chr1:230513275-230513520	chr1	+	230513323	230513563	True	NM_001145036,NM_024554	chr1,chr1	+,-	COG2,PGBD5	264638,26
chr7:92748451-92749979	chr7	+	92748639	92749897	True	NM_024553,NM_001193307,NM_017654	chr7,chr7,chr7	+,-,-	CCDC132,SAMD9,SAMD9	111755,-1303,-1303
chr13:53313763-53314042	chr13	+	53313770	53313956	True	NR_031582,NM_007015,NM_001011705	chr13,chr13,chr13	+,-,-	MIR759,LECT1,LECT1	70228,41,41
chr15:65366663-65366891	chr15	+	65366662	65366729	True	NM_001101362,NM_016563	chr15,chr15	+,-	KBTBD13,RASL12	2424,-6274
chr16:1349850-1350282	chr16	+	1349893	1350229	True	NM_194261,NM_194260,NM_001001410,NM_003345,NM_194259	chr16,chr16,chr16,chr16,chr16	+,+,-,+,+	UBE2I,UBE2I,C16orf42,UBE2I,UBE2I	8950,9131,51694,9408,9408
chr1:222792588-222794541	chr1	+	222792595	222794541	True	NM_198551,NM_005681	chr1,chr1	+,-	MIA3,TAF1A	-1202,-29320
chr14:36984334-36984575	chr14	+	36984376	36984612	True	NM_003317,NM_006194,NM_001101341,NM_001079668	chr14,chr14,chr14,chr14	-,+,-,-	NKX2-1,PAX9,SFTA3,NKX2-1	4341,142160,-1386,4868
chr19:12833596-12833901	chr19	+	12833610	12833942	True	NM_001136196,NM_001136195,NM_004317,NM_013433	chr19,chr19,chr19,chr19	-,-,+,-	TNPO2,TNPO2,ASNA1,TNPO2	-148,918,14363,-505
chr3:50397110-50398133	chr3	+	50397267	50397799	True	NM_007022,NM_007024,NM_006545	chr3,chr3,chr3	+,-,-	CYB561D2,TMEM115,NPRL2	-9021,-328,-8781
chr14:21268961-21269849	chr14	+	21268986	21269802	True	NM_198232,NM_005615,NM_198234,NM_002933,NM_198235	chr14,chr14,chr14,chr14,chr14	-,+,-,-,-	RNASE1,RNASE6,RNASE1,RNASE1,RNASE1	806,-19828,1284,1284,1284
chr19:13214730-13215257	chr19	+	13215030	13215095	True	NM_005583,NM_052876	chr19,chr19	-,+	LYL1,NACC1	-1056,14013
chr19:7008296-7009031	chr19	+	7008549	7008951	True	NR_024372,NM_001136507	chr19,chr19	-,+	FLJ25758,MBD3L5	-2123,21642
chr22:18257368-18257884	chr22	+	18257407	18257501	True	NM_001196,NM_197967,NM_197966,NM_015367	chr22,chr22,chr22,chr22	-,-,-,+	BID,BID,BID,BCL2L13	-149,-149,-628,-135973
chr17:3513880-3514090	chr17	+	3513962	3514098	True	NM_080704,NM_001031681	chr17,chr17	-,+	TRPV1,CTNS	-1257,25663
chr3:172428263-172428558	chr3	+	172428267	172428579	True	NM_001146278,NM_020792,NM_018098,NM_001146277,NM_001146276	chr3,chr3,chr3,chr3,chr3	-,-,+,-,-	NCEH1,NCEH1,ECT2,NCEH1,NCEH1	479,479,43718,479,479
chr7:101926597-101927500	chr7	+	101926695	101927471	True	NR_036245,NM_020979,NM_001146210	chr7,chr7,chr7	+,+,-	MIR4285,SH2B2,SPDYE6	8897,933,69468
chr5:56119021-56120750	chr5	+	56119251	56120250	True	NM_152622,NM_005921	chr5,chr5	-,+	MIER3,MAP3K1	127761,-8402
chr9:35035853-35036153	chr9	+	35035886	35036184	True	NM_001040410,NM_001040411,NM_001040412,NM_007126,NM_203299	chr9,chr9,chr9,chr9,chr9	+,+,+,-,+	C9orf131,C9orf131,C9orf131,VCP,C9orf131	6038,4917,4917,36605,6038
chr17:78192714-78193480	chr17	+	78193048	78193514	True	NM_000199,NM_173626,NM_001166349,NM_001166348,NM_001166347	chr17,chr17,chr17,chr17,chr17	-,+,+,+,+	SGSH,SLC26A11,SLC26A11,SLC26A11,SLC26A11	735,685,685,685,685
chr4:121844169-121845114	chr4	+	121844348	121845024	True	NM_018699,NR_024365	chr4,chr4	-,+	PRDM5,LOC100192379	-335,840715
chr1:86942946-86943582	chr1	+	86942972	86943590	True	NM_001285,NM_020729	chr1,chr1	+,-	CLCA1,ODF2L	-8498,-80947
chr8:10589753-10590019	chr8	+	10589870	10590010	True	NM_001040032,NM_031439	chr8,chr8	+,-	C8orf74,SOX7	-59774,-1848
chr5:79783512-79783826	chr5	+	79783585	79783781	True	NM_205548,NM_001004441	chr5,chr5	+,-	FAM151B,ANKRD34B	18,82573
chr4:9532793-9533046	chr4	+	9532848	9532930	True	NR_031688,NM_001040448	chr4,chr4	-,+	MIR548I2,DEFB131	25057,-86639
chr3:93739662-93741263	chr3	+	93739741	93740944	True	NM_022072,NR_033427,NM_001001850	chr3,chr3,chr3	+,+,-	NSUN3,ARL13B,STX19	40910,-40809,6572
chr5:67596158-67598007	chr5	+	67596170	67597494	True	NM_181504,NM_176816	chr5,chr5	+,-	PIK3R1,CCDC125	-9739,1018967
chr14:81994462-81994748	chr14	+	81994469	81994787	True	NM_005065,NM_000369	chr14,chr14	-,+	SEL1L,TSHR	5468,-572654
chr10:94429579-94429997	chr10	+	94429630	94429701	True	NM_002729,NM_004969	chr10,chr10	+,-	HHEX,IDE	19979,-95778
chr3:183413155-183414512	chr3	+	183413559	183414550	True	NM_024871,NM_018023	chr3,chr3	-,+	MAP6D1,YEATS2	128893,1055
chr8:87076620-87077581	chr8	+	87076622	87077600	True	NM_152565,NM_033126	chr8,chr8	+,-	ATP6V0D2,PSKH2	33538,4302
chr9:72455173-72455764	chr9	+	72455355	72455803	True	NM_001099666,NM_001010940	chr9,chr9	-,+	PTAR1,C9orf135	-80479,-19687
chr2:27532669-27533054	chr2	+	27532689	27532972	True	NM_003353,NM_187841	chr2,chr2	-,+	UCN,TRIM54	-1559,-27443
chr8:23316762-23317853	chr8	+	23316951	23317592	True	NM_016612,NM_001128930,NM_004901	chr8,chr8,chr8	+,-,-	SLC25A37,ENTPD4,ENTPD4	68770,-1707,-1815
chr3:47051753-47052192	chr3	+	47051776	47052170	True	NR_024046,NM_144716	chr3,chr3	+,-	NRADDP,CCDC12	861,-33506
chr3:38393786-38394887	chr3	+	38393866	38394655	True	NM_005108,NR_028389	chr3,chr3	+,-	XYLB,LOC100128640	-5678,101714
chr12:50087767-50088549	chr12	+	50087998	50088427	True	NM_003217,NM_175736	chr12,chr12	+,-	TMBIM6,FMNL3	46865,12828
chr20:45136780-45137995	chr20	+	45136888	45137990	True	NM_018102,NM_030777,NM_199441	chr20,chr20,chr20	-,+,-	ZNF334,SLC2A10,ZNF334	4254,200288,4254
chr4:149363906-149364809	chr4	+	149364032	149364851	True	NM_001166104,NM_000901,NM_024605	chr4,chr4,chr4	-,-,+	NR3C2,NR3C2,ARHGAP10	-360,-360,-710630
chr15:93188079-93188774	chr15	+	93188259	93188759	True	NR_033769,NM_207446	chr15,chr15	+,-	ASB9P1,FAM174B	149954,10322
chr20:2643525-2644355	chr20	+	2643841	2644281	True	NR_004399,NR_002981,NR_003078,NM_006899,NR_002738,NR_002739,NM_174855,NM_174856	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,+,+,-,+,+,-,-	SNORD86,SNORA51,SNORD110,IDH3B,SNORD57,SNORD56,IDH3B,IDH3B	-7150,-8180,-9035,612,-6308,-6623,612,612
chr11:120008679-120008942	chr11	+	120008690	120008958	True	NM_012101,NM_178507	chr11,chr11	-,+	TRIM29,OAF	-45,72788
chr1:89725974-89727392	chr1	+	89726090	89727137	True	NM_198460,NM_001134486	chr1,chr1	+,-	GBP6,GBP5	102298,11464
chr1:241715222-241715797	chr1	+	241715249	241715723	True	NM_003679,NM_000143	chr1,chr1	+,-	KMO,FH	-19629,-32164
chr12:57703001-57703714	chr12	+	57703109	57703718	True	NM_014925,NM_001166357	chr12,chr12	-,+	R3HDM2,SHMT2	583,-79018
chr1:33336656-33337348	chr1	+	33336960	33337380	True	NM_001171941,NM_001171940,NM_153756,NM_002143	chr1,chr1,chr1,chr1	-,-,-,+	FNDC5,FNDC5,FNDC5,HPCA	752,-546,-546,14717
chr3:149684448-149686202	chr3	+	149684570	149686242	True	NM_053024,NM_002628,NR_036538	chr3,chr3,chr3	-,-,+	PFN2,PFN2,LOC646903	2549,2549,2823
chr12:96394373-96395667	chr12	+	96394822	96395329	True	NM_152435,NM_002108	chr12,chr12	+,-	AMDHD1,HAL	-57802,-4751
chr8:13321258-13321595	chr8	+	13321261	13321559	True	NM_001007090,NM_182643	chr8,chr8	+,-	C8orf48,DLC1	102792,50930
chr9:117268060-117268280	chr9	+	117268122	117268306	True	NM_001083885,NM_004888,NM_001173425,NM_015404	chr9,chr9,chr9,chr9	-,+,-,-	DFNB31,ATP6V1G1,DFNB31,DFNB31	-2627,81687,-386,-386
chr15:66796185-66796646	chr15	+	66796234	66796622	True	NM_006049,NM_000968,NR_003105,NR_002440,NR_002441,NR_002442,NR_002443,NM_017975	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,+,-,-,-,-,+	SNAPC5,RPL4,ZWILCH,SNORD16,SNORD18A,SNORD18B,SNORD18C,ZWILCH	-6088,614,808,-986,-582,-1805,-2578,808
chr2:85660744-85661561	chr2	+	85660866	85661610	True	NM_001747,NM_198482	chr2,chr2	-,+	CAPG,SH2D6	-23190,307
chr21:44775742-44776105	chr21	+	44775759	44776059	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	93844,70993
chr7:36748352-36750029	chr7	+	36748401	36750019	True	NM_018685,NM_001177506	chr7,chr7	+,-	ANLN,AOAH	-319021,14185
chr16:4380751-4381068	chr16	+	4380754	4380982	True	NM_032575,NM_016069	chr16,chr16	+,-	GLIS2,PAM16	1242,20441
chr11:105948759-105949104	chr11	+	105948795	105949104	True	NM_198439,NM_015423,NM_152433	chr11,chr11,chr11	-,+,-	KBTBD3,AASDHPPT,KBTBD3	-330,-554,-330
chr22:50638407-50638657	chr22	+	50638472	50638678	True	NM_031454,NM_020461	chr22,chr22	+,-	SELO,TUBGCP6	729,44772
chr7:44648017-44649150	chr7	+	44648490	44649192	True	NM_182547,NM_001003941,NM_001165036,NM_002541	chr7,chr7,chr7,chr7	-,+,+,+	TMED4,OGDH,OGDH,OGDH	-26663,-2429,-2429,-2429
chr2:219825923-219826475	chr2	+	219825975	219826367	True	NM_003936,NM_017521	chr2,chr2	+,-	CDK5R2,FEV	-1628,24062
chr16:15147506-15147925	chr16	+	15147799	15147967	True	NM_015027,NM_173474	chr16,chr16	+,-	PDXDC1,NTAN1	-79020,1916
chr17:48547305-48547995	chr17	+	48547481	48547703	True	NM_018346,NM_001267	chr17,chr17	+,-	RSAD1,CHAD	8486,-1254
chr3:119332662-119333738	chr3	+	119332798	119333757	True	NM_015900,NM_022135	chr3,chr3	+,-	PLA1A,POPDC2	-16128,45697
chr1:244996840-244997164	chr1	+	244997121	244997196	True	NR_026778,NM_198076	chr1,chr1	-,+	NCRNA00201,FAM36A	13104,1442
chr14:21459148-21459780	chr14	+	21459357	21459651	True	NM_014579,NM_201538,NM_001029991,NR_033419,NM_022734	chr14,chr14,chr14,chr14,chr14	+,-,+,+,+	SLC39A2,NDRG2,METTL17,SLC39A2,METTL17	7762,33671,-1443,7762,-1443
chr15:90894477-90895048	chr15	+	90894708	90895010	True	NR_028287,NM_001004309	chr15,chr15	-,+	GABARAPL3,ZNF774	-2029,466
chr18:9706524-9708007	chr18	+	9706634	9707788	True	NM_006868,NM_005134	chr18,chr18	+,-	RAB31,PPP4R1	439,-92034
chr12:128039708-128040500	chr12	+	128039745	128040517	True	NR_033970,NR_033987	chr12,chr12	-,+	LOC440117,FLJ37505	-680509,325644
chr19:55580922-55582117	chr19	+	55580985	55582000	True	NM_001145971,NR_027381,NM_017729,NR_027382,NM_133180,NM_138412	chr19,chr19,chr19,chr19,chr19,chr19	-,-,+,-,+,-	RDH13,RDH13,EPS8L1,RDH13,EPS8L1,RDH13	-6400,-6400,9759,-6400,5220,-71
chr1:160001470-160001671	chr1	+	160001508	160001684	True	NM_145167,NM_004983	chr1,chr1	-,+	PIGM,KCNJ9	149,49675
chr8:77509976-77511723	chr8	+	77510147	77511475	True	NM_024721,NR_024360	chr8,chr8	+,-	ZFHX4,LOC100192378	82039,84085
chr19:18549272-18549547	chr19	+	18549315	18549575	True	NM_032627,NM_001170939,NM_001170938,NM_016368	chr19,chr19,chr19,chr19	+,-,-,-	SSBP4,ISYNA1,ISYNA1,ISYNA1	-19220,-394,-204,-204
chr8:67406482-67408306	chr8	+	67406485	67407923	True	NM_001080416,NM_152765	chr8,chr8	-,+	MYBL1,C8orf46	117608,-1045
chr15:74494898-74496590	chr15	+	74494917	74496515	True	NM_001199042,NM_001199040,NM_022369,NM_001142619,NM_001142618,NM_001142617,NM_001142620,NM_201526,NM_001199041	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,-,-,-,-,-,+,-	STRA6,STRA6,STRA6,STRA6,STRA6,STRA6,STRA6,ISLR,STRA6	-301,5581,-301,4906,35,4906,4906,-28063,3930
chrX:48060915-48061602	chrX	+	48061018	48061407	True	NM_175723,NM_021015,NM_005635	chrX,chrX,chrX	-,-,+	SSX5,SSX5,SSX1	-4819,-4819,53389
chr19:14552426-14553210	chr19	+	14552428	14552694	True	NM_005804,NM_213560,NM_002741	chr19,chr19,chr19	-,+,+	DDX39A,PKN1,PKN1	-22233,-1393,-8313
chr6:137533680-137534521	chr6	+	137533710	137534541	True	NM_000416,NM_001008783	chr6,chr6	-,+	IFNGR1,SLC35D3	6086,-290368
chr10:120791401-120792434	chr10	+	120791410	120792272	True	NR_002917,NM_199461	chr10,chr10	-,+	SNORA19,NANOS1	27428,-2233
chr8:28556432-28557116	chr8	+	28556532	28557028	True	NM_001172562,NM_001440	chr8,chr8	-,+	INTS9,EXTL3	190456,2124
chr12:62585455-62585748	chr12	+	62585483	62585779	True	NM_178539,NM_006313	chr12,chr12	-,+	FAM19A2,USP15	822,68407
chr22:30640988-30641659	chr22	+	30641108	30641416	True	NM_001017437,NM_002309	chr22,chr22	+,-	CCDC157,LIF	111210,1430
chr10:7761076-7762703	chr10	+	7761133	7762679	True	NM_001001851,NM_002216	chr10,chr10	-,+	ITIH5,ITIH2	-52172,-15948
chr1:47899363-47899567	chr1	+	47899362	47899582	True	NR_026878,NM_004474	chr1,chr1	-,+	MGC12982,FOXD2	781,2106
chr11:43385571-43386514	chr11	+	43385897	43386295	True	NM_018259,NR_033868	chr11,chr11	+,-	TTC17,LOC399881	-5521,-94978
chr5:172095951-172096798	chr5	+	172096008	172096688	True	NM_001142651,NM_004417	chr5,chr5	+,-	NEURL1B,DUSP1	-27783,101569
chr11:6341660-6341906	chr11	+	6341682	6341762	True	NM_176875,NM_145040	chr11,chr11	+,-	CCKBR,PRKCDBP	-60767,28
chr14:21894017-21894836	chr14	+	21894139	21894673	True	NM_001170629,NM_014828	chr14,chr14	-,+	CHD8,TOX4	5252,50661
chr14:23820990-23821227	chr14	+	23820998	23821234	True	NM_020372,NM_016609,NM_172314	chr14,chr14,chr14	-,-,+	SLC22A17,SLC22A17,IL25	295,896,20783
chr13:51728195-51729068	chr13	+	51728586	51729116	True	NR_003923,NM_145019	chr13,chr13	-,+	GUCY1B2,FAM124A	-88293,67390
chr19:8842272-8843122	chr19	+	8842298	8842696	True	NM_178525,NM_001004699	chr19,chr19	-,+	ACTL9,OR2Z1	-33126,-958
chr9:96214932-96215189	chr9	+	96214969	96215221	True	NM_198841,NM_014612	chr9,chr9	-,+	FAM120AOS,FAM120A	703,-847
chr8:128168191-128170047	chr8	+	128168231	128169124	True	NM_001159542,NR_024393	chr8,chr8	+,-	POU5F1B,LOC727677	258732,325320
chr12:107001889-107003087	chr12	+	107002184	107003138	True	NM_006825,NM_002920	chr12,chr12	-,+	CKAP4,RFX4	-360471,-7286
chr22:29729106-29729318	chr22	+	29729164	29729314	True	NR_037426,NR_003686,NM_152237	chr22,chr22,chr22	-,-,+	MIR3653,SNORD125,GAS2L1	6,-3,-26218
chr11:107303854-107304090	chr11	+	107303992	107304109	True	NM_001130037,NM_152434	chr11,chr11	+,-	ELMOD1,CWF19L2	157707,24516
chr15:89531968-89533605	chr15	+	89532765	89533473	True	NM_007011,NM_005928	chr15,chr15	+,-	ABHD2,MFGE8	97907,-76102
chr19:58065060-58066727	chr19	+	58065166	58066633	True	NM_001039654,NM_153263	chr19,chr19	-,+	ZNF550,ZNF549	1142,-26525
chr12:108710611-108711921	chr12	+	108711011	108711909	True	NM_001142345,NM_014653	chr12,chr12	-,+	CMKLR1,WSCD2	2580,-187554
chr17:5390638-5391100	chr17	+	5390771	5390851	True	NM_016041,NM_024039	chr17,chr17	-,+	DERL2,MIS12	-1277,-581
chr11:3837463-3838303	chr11	+	3837557	3838257	True	NM_139131,NR_027018,NM_014489,NR_027016	chr11,chr11,chr11,chr11	-,+,+,+	NUP98,PGAP2,PGAP2,PGAP2	-18535,-8368,-7842,-7842
chr16:56782835-56783414	chr16	+	56782972	56783448	True	NM_005950,NM_014669	chr16,chr16	-,+	MT1G,NUP93	-80995,-19006
chr19:14315155-14315383	chr19	+	14315229	14315413	True	NM_014921,NR_024282,NM_001008701	chr19,chr19,chr19	-,+,-	LPHN1,LOC113230,LPHN1	1634,-131459,1634
chr1:58704754-58705564	chr1	+	58704797	58705600	True	NM_021080,NR_034014	chr1,chr1	-,+	DAB1,LOC100131060	10661,545222
chr1:159999345-160000905	chr1	+	160000044	160000946	True	NM_145167,NM_004983	chr1,chr1	-,+	PIGM,KCNJ9	887,50413
chr15:25471746-25472073	chr15	+	25471888	25471994	True	NR_003358,NR_003496,NR_003497,NR_003351,NR_003344,NR_003345,NR_003346,NR_003347,NM_130838,NR_003343,NR_003303,NR_003348,NR_003349,NR_003350	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,-,+,+,+,+,+	SNORD115-43,HBII-52-27,HBII-52-28,SNORD115-36,SNORD115-29,SNORD115-30,SNORD115-31,SNORD115-32,UBE3A,SNORD115-26,SNORD115-11,SNORD115-33,SNORD115-34,SNORD115-35	-3546,-6289,-4438,-3546,-3546,-1589,261,2119,178709,-8175,-3546,3990,5539,7399
chrX:49165035-49166913	chrX	+	49165118	49166892	True	NM_001098413,NM_014009	chrX,chrX	+,-	GAGE10,FOXP3	-5044,-43830
chr11:32913002-32913996	chr11	+	32913175	32913996	True	NM_001008391,NM_001076786	chr11,chr11	-,+	CCDC73,QSER1	-96988,795
chr20:62339072-62339313	chr20	+	62339117	62339349	True	NM_032527,NM_003224,NM_001195653,NM_001195654,NM_181485,NM_001083113,NM_001134758	chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,-,+,+,+,+,-	ZGPAT,ARFRP1,ZGPAT,ZGPAT,ZGPAT,ZGPAT,ARFRP1	30,56,30,30,30,-374,56
chrX:20161077-20162231	chrX	+	20161359	20162119	True	NR_023358,NM_001173456,NM_001412	chrX,chrX,chrX	-,+,-	SCARNA9L,PDHA1,EIF1AX	-6828,-799400,-1393
chrY:1606521-1607274	chrY	+	1606525	1606765	True	NM_178129,NR_027383	chrY,chrY	-,+	P2RY8,AKAP17A	-488,53720
chrY:1606521-1607274	chrX	+	1656525	1656765	False	NM_178129,NR_027383	chrX,chrX	-,+	P2RY8,AKAP17A	-488,53720
chr22:38053509-38053912	chr22	+	38053539	38053913	True	NM_020315,NM_006498	chr22,chr22	+,-	PDXP,LGALS2	823,-77515
chr13:21512319-21512734	chr13	+	21512399	21512779	True	NM_022459,NM_005870	chr13,chr13	-,+	XPO4,SAP18	-35486,201873
chr2:63541912-63543518	chr2	+	63541956	63543025	True	NM_014562,NR_036635	chr2,chr2	+,-	OTX1,DBIL5P2	-264083,-195279
chr7:75670045-75671883	chr7	+	75670328	75671547	True	NM_016086,NM_005918	chr7,chr7	-,+	STYXL1,MDH2	5824,5845
chr3:79815005-79815727	chr3	+	79815052	79815651	True	NM_001128929,NM_002941	chr3,chr3	+,-	ROBO2,ROBO1	-2667940,1458
chr2:47382901-47383949	chr2	+	47382961	47383997	True	NM_001163561,NM_002354,NM_173649	chr2,chr2,chr2	-,+,-	C2orf61,EPCAM,C2orf61	-444,212289,-444
chr16:20356629-20357474	chr16	+	20356953	20357411	True	NM_001008389,NM_017888,NM_003361	chr16,chr16,chr16	-,+,-	UMOD,ACSM5,UMOD	6676,63444,6676
chr13:78291885-78292578	chr13	+	78292024	78292513	True	NR_037438,NM_001040153	chr13,chr13	-,+	MIR3665,SLAIN1	-19773,-19605
chr16:68139278-68140622	chr16	+	68139550	68140174	True	NM_173165,NM_018380	chr16,chr16	+,-	NFATC3,DDX28	-20343,-81780
chrX:101395999-101396451	chrX	+	101396078	101396274	True	NM_001006938,NM_080390	chrX,chrX	-,+	TCEAL6,TCEAL2	1164,-15469
chrX:101395999-101396451	chrX	-	102864021	102864097	False	NM_001142418,NM_032926,NM_001006933	chrX,chrX,chrX	-,+,+	MORF4L2,TCEAL3,TCEAL3	77701,-1238,-1238
chr10:51484397-51485113	chr10	+	51485004	51485080	True	NM_001077685,NM_002443	chr10,chr10	-,+	AGAP7,MSMB	1299,64472
chr10:51484397-51485113	chr10	+	46341599	46341675	False	NM_133446,NM_015262	chr10,chr10	-,+	AGAP4,FAM21C	1298,-119008
chr2:177017513-177017733	chr2	+	177017530	177017674	True	NR_033979,NM_014621,NR_029609	chr2,chr2,chr2	-,+,+	LOC401022,HOXD4,MIR10B	36062,-1469,-2551
chr2:242798899-242799227	chr2	+	242799002	242799204	True	NM_173821	chr2	+	C2orf85	12681
chr11:98940481-98941714	chr11	+	98940574	98941744	True	NM_175566,NM_001202474	chr11,chr11	+,-	CNTN5,PGR	-48754,2058100
chr17:7380564-7380789	chr17	+	7380564	7380762	True	NM_000937,NM_020899,NM_001128833,NM_001102614	chr17,chr17,chr17,chr17	+,-,-,+	POLR2A,ZBTB4,ZBTB4,AMAC1L3	6935,6856,2232,3958
chr11:67416520-67418039	chr11	+	67416727	67418023	True	NM_007103,NM_080658,NM_005995	chr11,chr11,chr11	+,-,-	NDUFV1,ACY3,TBX10	-42455,157,-9696
chr6:56498317-56498826	chr6	+	56498635	56498878	True	NM_152731,NM_015548,NM_001723	chr6,chr6,chr6	+,-,-	BEND6,DST,DST	320894,8875,8875
chr10:98338552-98339900	chr10	+	98338937	98339924	True	NM_020123,NM_001170765	chr10,chr10	-,+	TM9SF3,LCOR	6935,252092
chr7:12604154-12605283	chr7	+	12604404	12605248	True	NM_001112706,NM_001135924	chr7,chr7	+,-	SCIN,VWDE	4954,-160552
chr4:156703318-156704108	chr4	+	156703530	156704128	True	NM_017419,NM_000857	chr4,chr4	-,+	ACCN5,GUCY1B3	83347,-23455
chr6:73963081-73964473	chr6	+	73963308	73964455	True	NM_001017361,NM_030568	chr6,chr6	+,-	C6orf221,KHDC1	107944,8508
chr10:129923515-129924091	chr10	+	129923547	129924065	True	NM_130435,NM_002417,NM_001145966	chr10,chr10,chr10	+,-,-	PTPRE,MKI67,MKI67	-77800,453,453
chr17:81036526-81036805	chr17	+	81036591	81036651	True	NM_001009905,NM_001004431	chr17,chr17	-,+	B3GNTL1,METRNL	-26905,915
chr22:29949304-29949519	chr22	+	29949308	29949518	True	NM_181825,NM_001002877,NM_001002878,NM_001002879,NM_003678	chr22,chr22,chr22,chr22,chr22	+,-,-,-,-	NF2,THOC5,THOC5,THOC5,THOC5	50026,268,176,176,268
chr1:110950537-110951166	chr1	+	110950538	110951042	True	NM_032414,NM_006402	chr1,chr1	+,-	PROK1,HBXIP	42745,8
chr6:128176047-128177821	chr6	+	128176182	128177847	True	NM_001010923,NM_001010905	chr6,chr6	-,+	THEMIS,C6orf58	44436,-277922
chr15:68871864-68872080	chr15	+	68871921	68872127	True	NM_006091,NM_001004439	chr15,chr15	+,-	CORO2B,ITGA11	-399,-147429
chr16:20332627-20334384	chr16	+	20332662	20334212	True	NM_017888,NM_001502,NM_001007240,NM_001007241,NM_001007242	chr16,chr16,chr16,chr16,chr16	+,-,-,-,-	ACSM5,GP2,GP2,GP2,GP2	86643,4673,4673,4673,4673
chr1:109656934-109658109	chr1	+	109657130	109657815	True	NM_020775,NM_001122961	chr1,chr1	+,-	KIAA1324,C1orf194	-596,-651
chr7:42954246-42955578	chr7	+	42954382	42955530	True	NM_024054,NM_001099858,NM_031903	chr7,chr7,chr7	-,-,+	C7orf25,C7orf25,MRPL32	-2693,-2693,16408
chr12:123189728-123190210	chr12	+	123189958	123190131	True	NM_003677,NM_177551	chr12,chr12	+,-	DENR,GPR109A	47239,-2054
chr9:82188370-82188981	chr9	+	82188530	82188980	True	NM_002072,NM_007005	chr9,chr9	-,+	GNAQ,TLE4	-1542311,-1703
chr14:103594049-103595136	chr14	+	103594053	103595007	True	NR_033938,NM_006291	chr14,chr14	-,+	LOC100131366,TNFAIP2	60408,-1440
chr7:23286854-23287118	chr7	+	23286860	23287138	True	NM_006547,NM_001005340,NM_002510	chr7,chr7,chr7	-,+,+	IGF2BP3,GPNMB,GPNMB	222907,-597,-597
chr11:67716860-67718332	chr11	+	67717825	67718373	True	NM_030930,NM_001161473	chr11,chr11	-,+	UNC93B1,ALDH3B1	53270,57674
chr19:12776838-12777143	chr19	+	12776847	12777191	True	NM_001099737,NM_001173498,NM_032332,NM_000528,NM_016145,NR_029375	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,-,-,+	WDR83,MAN2B1,WDR83,MAN2B1,C19orf56,WDR83	426,450,3325,450,3324,426
chr12:6487675-6488816	chr12	+	6487718	6488728	True	NM_001159576,NM_002342,NM_001159575,NM_001038	chr12,chr12,chr12,chr12	-,+,-,-	SCNN1A,LTBR,SCNN1A,SCNN1A	-3328,4628,-1195,-2813
chr9:10511378-10512437	chr9	+	10511758	10512474	True	NM_000550,NM_002839	chr9,chr9	+,-	TYRP1,PTPRD	2180911,100299
chr12:70194666-70195459	chr12	+	70194816	70195484	True	NM_001024647,NM_032735	chr12,chr12	+,-	RAB3IP,BEST3	-22114,-101620
chr21:38446911-38447739	chr21	+	38447063	38447784	True	NM_003316,NM_153681,NM_153682,NR_028352,NM_001001894	chr21,chr21,chr21,chr21,chr21	+,-,-,-,+	TTC3,PIGP,PIGP,PIGP,TTC3	7462,-1960,-1605,-1605,-1543
chrX:134125003-134126721	chrX	+	134125325	134126649	True	NM_001163438,NM_001078173	chrX,chrX	+,-	LOC644538,FAM127C	-409,29976
chr21:34544084-34545763	chr21	+	34544474	34545700	True	NR_024102,NM_000874	chr21,chr21	-,+	C21orf54,IFNAR2	-1933,56530
chr11:111796817-111797346	chr11	+	111796823	111797389	True	NM_001885,NM_080659	chr11,chr11	-,+	CRYAB,C11orf52	-14350,-7273
chr1:900186-900477	chr1	+	900216	900474	True	NM_015658,NM_198317,NM_001160184,NM_032129	chr1,chr1,chr1,chr1	-,+,+,+	NOC2L,KLHL17,PLEKHN1,PLEKHN1	-5537,-4300,1402,1402
chr11:47603039-47603773	chr11	+	47603069	47603701	True	NM_004551,NR_024222,NM_018095,NM_001164379,NM_016506	chr11,chr11,chr11,chr11,chr11	+,-,-,+,-	NDUFS3,KBTBD4,KBTBD4,FAM180B,KBTBD4	-2569,-2502,-2502,4528,-2548
chr3:132038587-132039388	chr3	+	132038681	132039433	True	NM_001099,NM_001134194,NM_130808	chr3,chr3,chr3	+,+,-	ACPP,ACPP,CPNE4	-2521,-2521,-284837
chr1:32573058-32573393	chr1	+	32573360	32573444	True	NM_012316,NM_019118	chr1,chr1	+,-	KPNA6,TMEM234	199,114536
chr17:26732174-26732555	chr17	+	26732176	26732602	True	NM_080669,NM_015077	chr17,chr17	-,+	SLC46A1,SARM1	676,-33240
chr16:3067768-3068012	chr16	+	3067799	3068020	True	NM_024339,NM_001142350,NM_017885,NM_001002017,NM_001002018,NM_021195,NM_020982,NM_016639	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,-,-,-,-,+,+	THOC6,THOC6,HCFC1R1,HCFC1R1,HCFC1R1,CLDN6,CLDN9,TNFRSF12A	6011,6011,6317,6317,6317,218,-5393,2292
chr9:138594250-138594640	chr9	+	138594281	138594635	True	NM_020822,NM_001012415,NM_001101677	chr9,chr9,chr9	+,-,-	KCNT1,SOHLH1,SOHLH1	-301,-2907,-2907
chr19:47424478-47424844	chr19	+	47424506	47424838	True	NM_021575,NM_004491	chr19,chr19	-,+	AP2S1,GRLF1	-70303,-2625
chr10:65225851-65227214	chr10	+	65225929	65226912	True	NR_027182,NM_032776	chr10,chr10	+,-	LOC84989,JMJD1C	-991,-207
chr18:40682912-40683219	chr18	+	40682942	40683124	True	NM_002647,NM_002930	chr18,chr18	+,-	PIK3C3,RIT2	-1147804,12583
chrX:72097854-72099093	chrX	+	72098054	72099077	True	NM_001080851,NM_033053	chrX,chrX	-,-	DMRTC1B,DMRTC1	-2432,-2432
chrX:72097854-72099093	chrX	-	72061416	72062443	False	NM_001080851,NM_033053	chrX,chrX	+,+	DMRTC1B,DMRTC1	2432,2432
chr1:183460309-183460960	chr1	+	183460309	183460993	True	NM_201569,NM_015039	chr1,chr1	+,-	SMG7,NMNAT2	-18861,-72675
chr13:99173833-99174310	chr13	+	99173982	99174266	True	NM_003576,NR_036129	chr13,chr13	-,+	STK24,MIR3170	125,-313255
chr22:38431724-38432073	chr22	+	38431850	38431918	True	NM_013356,NM_001039583	chr22,chr22	-,+	SLC16A8,PICK1	47302,21343
chr6:41888891-41889118	chr6	+	41888988	41889124	True	NM_004275,NM_004053	chr6,chr6	-,+	MED20,BYSL	-111,-74
chr11:12695924-12696124	chr11	+	12695932	12696122	True	NM_021961,NM_013253	chr11,chr11	+,-	TEAD1,DKK3	-14,-665015
chr6:88108333-88108763	chr6	+	88108416	88108527	True	NR_026784,NM_001031743,NM_198568	chr6,chr6,chr6	+,+,-	C6orf164,C6orf165,GJB7	-1626,9162,-69420
chr11:33257348-33257832	chr11	+	33257678	33257748	True	NM_001033506,NM_001048200	chr11,chr11	-,+	CSTF3,HIPK3	-74641,21419
chr1:110038643-110039764	chr1	+	110038687	110039663	True	NM_020703,NM_001134403,NM_001134402,NM_182580,NM_001134404,NM_001134400	chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,+,+,+	AMIGO1,CYB561D1,CYB561D1,CYB561D1,CYB561D1,CYB561D1	12723,-2037,-2080,-2037,-2037,-2037
chr22:36041403-36042594	chr22	+	36041424	36042018	True	NM_203377,NM_030641	chr22,chr22	-,+	MB,APOL6	-22023,2405
chr12:95867346-95867639	chr12	+	95867350	95867654	True	NM_006838,NM_001042403	chr12,chr12	+,-	METAP2,USP44	167,75016
chr3:193715148-193715927	chr3	+	193715346	193715914	True	NR_027764,NR_033944,NM_005524	chr3,chr3,chr3	-,-,+	LOC100128023,LOC647323,HES1	-3319,5584,138016
chr3:138827278-138828256	chr3	+	138827278	138828292	True	NM_001134657,NR_026783	chr3,chr3	-,+	PRR23C,BPESC1	-63544,-4302
chr3:119217753-119218099	chr3	+	119217838	119217922	True	NM_016589,NM_018266	chr3,chr3	+,-	C3orf1,TMEM39A	-521,-35367
chr4:90757137-90757636	chr4	+	90757141	90757635	True	NM_000345,NM_001146054,NM_007351,NM_001146055,NM_007308	chr4,chr4,chr4,chr4,chr4	-,-,+,-,-	SNCA,SNCA,MMRN1,SNCA,SNCA	765,542,58416,1862,542
chr3:193712063-193713301	chr3	+	193712320	193713350	True	NR_027764,NR_033944,NM_005524	chr3,chr3,chr3	-,-,+	LOC100128023,LOC647323,HES1	-293,8148,140580
chr16:12993218-12994299	chr16	+	12993368	12994285	True	NM_001145205,NM_001145204,NM_018340	chr16,chr16,chr16	+,+,-	SHISA9,SHISA9,CPPED1	1191,1191,-95624
chr1:179855673-179856198	chr1	+	179855816	179856246	True	NM_015602,NM_145034,NM_001199260,NM_022347	chr1,chr1,chr1,chr1	+,-,-,-	TOR1AIP1,TOR1AIP2,TOR1AIP2,TOR1AIP2	-4460,-8875,-8875,-8875
chr9:116211573-116212439	chr9	+	116211602	116212002	True	NM_144488,NM_017443	chr9,chr9	+,-	RGS3,POLE3	-4643,-38573
chr22:38478108-38478475	chr22	+	38478259	38478443	True	NM_013356,NM_012407	chr22,chr22	-,+	SLC16A8,PICK1	777,-25048
chr14:105562463-105562981	chr14	+	105562664	105562956	True	NM_174891,NM_013345	chr14,chr14	+,-	C14orf79,GPR132	-110099,-30910
chr17:13505556-13506282	chr17	+	13505820	13506242	True	NR_003261,NM_006042	chr17,chr17	+,-	CDRT15P,HS3ST3A1	421572,-576
chr4:40337298-40338307	chr4	+	40337429	40338308	True	NM_019027,NM_017581	chr4,chr4	-,+	RBM47,CHRNA9	179733,-11
chr1:1334624-1334862	chr1	+	1334775	1334873	True	NM_001039577,NM_017971,NR_015434,NM_030937	chr1,chr1,chr1,chr1	-,-,+,-	CCNL2,MRPL20,LOC148413,CCNL2	-57,7870,36,-57
chr19:11372206-11372678	chr19	+	11372205	11372612	True	NM_020812,NM_018687	chr19,chr19	-,+	DOCK6,LOC55908	595,-21961
chr9:99691111-99692526	chr9	+	99691151	99692523	True	NM_001170741,NM_001045477,NM_001001662	chr9,chr9,chr9	+,+,-	FAM22G,FAM22G,ZNF782	84,84,-74762
chr9:99691111-99692526	chr9	-	97089684	97091060	False	NM_017561,NR_033937	chr9,chr9	-,+	FAM22F,LOC100132077	-84,3697
chr16:18472228-18473018	chr16	+	18472247	18472810	True	NR_036142,NR_003569	chr16,chr16	-,+	MIR3180-2,ABCC6P1	23364,109759
chr16:18472228-18473018	chr16	-	15025638	15025695	False	NR_023387,NM_006985	chr16,chr16	-,+	ABCC6P2,NPIP	-107079,5604
chr16:18472228-18473018	chr16	-	16423618	16424181	False	NR_036447,NM_001079528	chr16,chr16	+,-	PKD1P1,ABCC6	-12203,-106290
chr7:135195837-135196178	chr7	+	135195884	135196084	True	NM_001190847,NM_001190850,NM_001190849,NM_001190848,NM_001008225,NM_015135,NM_013316	chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,+,-	CNOT4,CNOT4,CNOT4,CNOT4,CNOT4,NUP205,CNOT4	-1009,-1009,-1009,-1009,-1009,46577,-1009
chr8:74000800-74001645	chr8	+	74000935	74001483	True	NM_153225,NM_017489	chr8,chr8	-,+	C8orf84,TERF1	4074,-79892
chr3:125800869-125801588	chr3	+	125800965	125801551	True	NM_017836,NM_001008486,NM_001008485,NM_001012337	chr3,chr3,chr3,chr3	-,-,-,+	SLC41A3,SLC41A3,SLC41A3,ROPN1B	1633,1633,1633,-112988
chr3:108032473-108033441	chr3	+	108032539	108033359	True	NM_007072,NM_018010	chr3,chr3	+,-	HHLA2,IFT57	-11258,-91122
chr7:74509884-74510130	chr7	+	74509890	74510144	True	NM_030798,NM_001003795	chr7,chr7	-,+	WBSCR16,GTF2IRD2B	-20191,-1594
chr7:74509884-74510130	chr7	-	74266107	74266361	False	NM_173537,NR_027775	chr7,chr7	-,+	GTF2IRD2,PMS2P5	1530,40532
chr8:97170799-97171198	chr8	+	97170870	97171188	True	NM_001001557,NM_014754	chr8,chr8	-,+	GDF6,PTDSS1	1882,102978
chr20:3775977-3776272	chr20	+	3776034	3776192	True	NM_021873,NM_021872,NM_001810,NM_004358	chr20,chr20,chr20,chr20	+,+,-,+	CDC25B,CDC25B,CENPB,CDC25B	208,208,-8697,208
chr13:60742445-60743822	chr13	+	60742480	60743742	True	NM_001042517,NM_001146071	chr13,chr13	-,+	DIAPH3,TDRD3	-4361,226848
chrX:46402476-46404233	chrX	+	46402832	46404223	True	NM_001039891,NM_001146291,NR_015378,NM_001190417	chrX,chrX,chrX,chrX	-,-,+,-	ZNF674,ZNF674,LOC401588,ZNF674	719,719,704,719
chr5:140744564-140744981	chr5	+	140744563	140745023	True	NM_018924,NM_032086,NM_018923,NM_032097,NM_032096,NM_032054,NM_018918,NM_018919,NM_032053,NM_005642,NM_018917	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,+,+,+,-,+	PCDHGB3,PCDHGA6,PCDHGB2,PCDHGB3,PCDHGB2,PCDHGA5,PCDHGA5,PCDHGA6,PCDHGA4,TAF7,PCDHGA4	4938,8627,-4911,4938,-4911,-716,-716,8627,-9846,-44212,-9846
chr17:41177837-41179221	chr17	+	41177994	41179249	True	NM_005440,NM_006373	chr17,chr17	+,-	RND2,VAT1	-787,-3535
chr6:3446243-3447913	chr6	+	3446311	3447731	True	NM_021945,NM_015482,NM_001128592	chr6,chr6,chr6	-,-,+	SLC22A23,SLC22A23,PSMG4	-1093,9112,-187200
chrX:114522606-114523148	chrX	+	114522605	114523015	True	NM_016383,NM_020871	chrX,chrX	+,-	LUZP4,LRCH2	1276,-53970
chr11:125494456-125494876	chr11	+	125494481	125494925	True	NM_001114122,NM_001114121,NM_001274,NM_001612	chr11,chr11,chr11,chr11	+,+,+,-	CHEK1,CHEK1,CHEK1,ACRV1	110,110,1386,55918
chr4:1684331-1684826	chr4	+	1684355	1684874	True	NM_001013622,NM_001174070,NM_006342	chr4,chr4,chr4	-,-,+	FAM53A,FAM53A,TACC3	894,1164,38391
chr9:115984312-115985017	chr9	+	115984378	115985032	True	NM_015258,NM_001859	chr9,chr9	-,+	FKBP15,SLC31A1	-737,-621
chr17:72771287-72772079	chr17	+	72771741	72772056	True	NM_015654,NM_017728	chr17,chr17	-,+	NAT9,TMEM104	465,565
chrX:135231405-135232536	chrX	+	135231432	135232589	True	NM_001173517,NM_001159700,NR_027621,NM_001449,NM_001159703,NM_001159702	chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,+	MAP7D3,FHL1,FHL1,FHL1,FHL1,FHL1	101203,-747,-2623,-1925,-1925,-1925
chr17:61560734-61561302	chr17	+	61560765	61561263	True	NM_152830,NM_001915,NM_000789,NM_001178057	chr17,chr17,chr17,chr17	+,-,+,+	ACE,CYB561,ACE,ACE	914,-37043,-6400,914
chrX:10849786-10851774	chrX	+	10849794	10851454	True	NM_001122608,NM_033290	chrX,chrX	+,-	HCCS,MID1	277951,406
chr13:113759633-113760004	chr13	+	113759729	113759927	True	NM_001127202,NM_019616,NM_000131	chr13,chr13,chr13	-,+,+	PCID2,F7,F7	103152,177,177
chr12:56653663-56654512	chr12	+	56653993	56654342	True	NM_173595,NM_144576,NM_001099337	chr12,chr12,chr12	-,+,+	ANKRD52,COQ10A,COQ10A	-1850,6299,6724
chr6:149807900-149808369	chr6	+	149807899	149808234	True	NM_207360,NM_138785	chr6,chr6	-,+	ZC3H12D,C6orf72	-1751,79293
chr1:46914294-46914522	chr1	+	46914381	46914541	True	NM_001097611,NM_001441	chr1,chr1	-,+	KNCN,FAAH	102396,-54493
chr6:4124117-4125256	chr6	+	4124321	4125282	True	NM_001085401,NM_001166010	chr6,chr6	+,-	C6orf201,ECI2	-44932,10479
chr20:893099-893357	chr20	+	893110	893190	True	NM_015985,NM_031424	chr20,chr20	-,+	ANGPT4,FAM110A	3820,-67876
chr1:150041869-150042575	chr1	+	150041949	150042580	True	NM_007259,NM_020205	chr1,chr1	+,-	VPS45,OTUD7B	-2660,-59263
chr1:110051209-110051588	chr1	+	110051214	110051576	True	NM_182580,NM_020703	chr1,chr1	+,-	CYB561D1,AMIGO1	-14564,810
chr8:37753682-37755252	chr8	+	37754042	37755176	True	NM_001002814,NM_025151,NM_032777	chr8,chr8,chr8	-,-,+	RAB11FIP1,RAB11FIP1,GPR124	1889,1889,-99692
chr13:111562963-111563516	chr13	+	111562962	111563498	True	NM_017664,NM_005537	chr13,chr13	-,+	ANKRD10,ING1	3970,-195654
chr19:58862820-58863128	chr19	+	58862854	58863166	True	NM_130786,NR_015380	chr19,chr19	-,+	A1BG,A1BG-AS1	1749,169
chr21:47575285-47575528	chr21	+	47575287	47575539	True	NM_001849,NM_006657,NM_206965	chr21,chr21,chr21	+,-,-	COL6A2,FTCD,FTCD	-57305,8,8
chr6:13804477-13804726	chr6	+	13804641	13804728	True	NM_001165034,NM_001031713	chr6,chr6	+,-	RNF182,CCDC90A	119948,10112
chr20:32889045-32889898	chr20	+	32889202	32889745	True	NM_001672,NM_000687,NM_001161766	chr20,chr20,chr20	+,-,-	ASIP,AHCY,AHCY	-41082,1527,9920
chr21:30394915-30395302	chr21	+	30394931	30395315	True	NM_016940,NM_001001992,NM_001032410,NM_006447	chr21,chr21,chr21,chr21	-,+,+,+	RWDD2B,USP16,USP16,USP16	-3246,1622,1622,1622
chr14:32416349-32416595	chr14	+	32416410	32416608	True	NR_027263,NM_001030055	chr14,chr14	-,+	C14orf128,ARHGAP5	129347,129886
chr15:40762831-40763059	chr15	+	40762871	40763015	True	NM_130468,NR_002208	chr15,chr15	+,-	CHST14,MRPL42P5	144,61784
chr5:140553227-140553539	chr5	+	140553297	140553521	True	NM_019120,NM_020957,NM_031947,NM_018940	chr5,chr5,chr5,chr5	+,+,-,+	PCDHB8,PCDHB16,SLC25A2,PCDHB7	3908,7458,130141,-1105
chr1:47078945-47079521	chr1	+	47078945	47079533	True	NM_201403,NM_198973,NM_001145474,NM_003684,NR_024174,NM_001135553,NR_024176,NM_145279	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,+,-,-,-,-,-	MOBKL2C,MKNK1,C1orf223,MKNK1,MKNK1,MKNK1,MKNK1,MOBKL2C	3080,-8979,57966,-8979,-8979,-8979,-8979,1322
chr4:81257872-81258795	chr4	+	81257935	81258424	True	NM_001145794,NM_152770	chr4,chr4	-,+	ANTXR2,C4orf22	-263458,-1112
chrX:153210971-153211606	chrX	+	153211191	153211429	True	NM_002910,NM_003492	chrX,chrX	-,+	RENBP,TMEM187	-959,26561
chr14:21453215-21454696	chr14	+	21453363	21454589	True	NM_001029991,NM_201538,NM_022734	chr14,chr14,chr14	+,-,+	METTL17,NDRG2,METTL17	3375,38727,3375
chr2:24150809-24151173	chr2	+	24151120	24151187	True	NM_181713,NM_017552	chr2,chr2	+,-	UBXN2A,ATAD2B	12188,-1186
chr14:77435175-77435566	chr14	+	77435304	77435543	True	NM_024496,NM_033426	chr14,chr14	-,+	IRF2BPL,KIAA1737	59546,129034
chr4:76484375-76484603	chr4	+	76484380	76484586	True	NR_037914,NM_178497	chr4,chr4	-,+	RCHY1,C4orf26	-44740,-3173
chr5:180673673-180673957	chr5	+	180673703	180673869	True	NR_002592,NM_006098,NR_002591,NM_201627	chr5,chr5,chr5,chr5	-,-,-,+	SNORD96A,GNB2L1,SNORD95,TRIM41	-4814,-2797,-3327,-23448
chr17:38854964-38855394	chr17	+	38854967	38855058	True	NM_019016,NM_001195387	chr17,chr17	-,+	KRT24,TMEM99	4995,120285
chr16:30537564-30537786	chr16	+	30537597	30537665	True	NM_023931,NM_024671,NM_002209	chr16,chr16,chr16	-,-,+	ZNF747,ZNF768,ITGAL	8579,295,-53665
chr1:26143567-26144634	chr1	+	26143600	26144594	True	NM_019557,NR_024498,NM_001099625,NM_001099627,NM_001099626	chr1,chr1,chr1,chr1,chr1	+,-,+,+,+	FAM54B,LOC646471,FAM54B,FAM54B,FAM54B	2089,5553,1802,1802,2724
chr1:204044468-204044812	chr1	+	204044472	204044818	True	NM_005686,NR_027902	chr1,chr1	+,-	SOX13,C1orf157	-2277,-34080
chr18:56936591-56936799	chr18	+	56936661	56936745	True	NM_013435,NM_002091	chr18,chr18	-,+	RAX,GRP	3930,-49312
chr17:19266996-19268264	chr17	+	19267336	19267998	True	NM_015681,NM_139032	chr17,chr17	-,+	B9D1,MAPK7	-1290,13035
chr11:65607109-65607349	chr11	+	65607223	65607314	True	NM_005507,NM_152760	chr11,chr11	-,+	CFL1,SNX32	18549,-5875
chr20:31754202-31754752	chr20	+	31754203	31754579	True	NM_080574,NM_080675	chr20,chr20	+,-	C20orf70,SUN5	1380,-161964
chr8:125739063-125739505	chr8	+	125739167	125739444	True	NM_005005,NM_014751	chr8,chr8	+,-	NDUFB9,MTSS1	-187875,1336
chr17:40193461-40195015	chr17	+	40193476	40195006	True	NM_017595,NR_029431	chr17,chr17	+,-	NKIRAS2,DNAJC7	-21440,-23761
chr19:55886959-55887650	chr19	+	55887015	55887625	True	NM_139172,NM_000991,NM_000641,NM_001190764,NM_001136135,NM_001136134,NM_001136137,NM_001136136	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,-,-,+,+,+,+	TMEM190,RPL28,IL11,LOC388564,RPL28,RPL28,RPL28,RPL28	578,9674,-5201,8052,9674,9674,9674,9674
chr1:152537768-152538492	chr1	+	152537787	152538415	True	NM_178434,NM_178435	chr1,chr1	+,-	LCE3C,LCE3E	34722,883
chr7:93518515-93519402	chr7	+	93518622	93519397	True	NM_021955,NM_006528	chr7,chr7	+,-	GNGT1,TFPI2	16422,718
chr6:38675742-38677613	chr6	+	38676078	38677652	True	NM_006708,NM_001371	chr6,chr6	-,+	GLO1,DNAH8	-5126,12899
chr20:17991957-17992478	chr20	+	17991975	17992511	True	NM_152227,NM_052865	chr20,chr20	-,+	SNX5,C20orf72	-42485,-42264
chr12:21291255-21292848	chr12	+	21291604	21292884	True	NM_021094,NM_006446	chr12,chr12	-,+	SLCO1A2,SLCO1B1	194998,-7537
chr10:26504423-26504883	chr10	+	26504510	26504811	True	NM_001134366,NM_001012750,NM_000818	chr10,chr10,chr10	+,-,+	GAD2,ABI1,GAD2	424,645255,424
chr3:156879685-156880981	chr3	+	156879737	156880963	True	NR_034008,NM_020307	chr3,chr3	+,-	LOC100498859,CCNL1	-72119,-1255
chr21:44849997-44850299	chr21	+	44850023	44850299	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	19604,-3021
chr6:43459707-43460233	chr6	+	43459844	43460280	True	NM_001012974,NM_001146017	chr6,chr6	-,+	C6orf154,TJAP1	18194,-2573
chr10:88511783-88512239	chr10	+	88512017	88512287	True	NM_024756,NM_004329	chr10,chr10	-,+	MMRN2,BMPR1A	205188,4108
chr11:66335478-66335708	chr11	+	66335491	66335723	True	NM_003793,NM_001104	chr11,chr11	-,+	CTSF,ACTN3	374,-21151
chr1:62207029-62207854	chr1	+	62207303	62207812	True	NM_176877,NM_032027	chr1,chr1	+,-	INADL,TM2D1	336,-16208
chr2:128048512-128048926	chr2	+	128048713	128048837	True	NM_000122,NM_000312	chr2,chr2	-,+	ERCC3,PROC	2965,127158
chr9:35116017-35116258	chr9	+	35116154	35116306	True	NM_006377,NM_025182	chr9,chr9	+,-	UNC13B,KIAA1539	45682,-261
chr12:54405075-54406279	chr12	+	54405188	54406306	True	NM_014620,NR_003716,NM_153693,NM_022658,NR_003084	chr12,chr12,chr12,chr12,chr12	+,-,+,+,+	HOXC4,HOTAIR,HOXC6,HOXC8,HOXC5	4335,-42673,4335,-2353,4335
chr8:145577295-145577601	chr8	+	145577316	145577650	True	NM_024531,NM_012162,NR_015428,NM_024555	chr8,chr8,chr8,chr8	+,-,-,-	GPR172A,FBXL6,C8ORFK29,FBXL6	4574,4532,905,4532
chr10:35929429-35929665	chr10	+	35929434	35929646	True	NM_153368,NM_031866	chr10,chr10	+,-	GJD4,FZD8	-35147,766
chr1:181055135-181056098	chr1	+	181055237	181055760	True	NM_016545,NM_005819	chr1,chr1	+,-	IER5,STX6	1877,-63191
chrX:72665583-72666644	chrX	+	72665586	72666661	True	NM_005193,NR_029423	chrX,chrX	+,-	CDX4,LOC139201	428,116310
chr14:31095936-31096672	chr14	+	31096039	31096645	True	NM_016106,NR_030354,NM_182835	chr14,chr14,chr14	+,-,+	SCFD1,MIR624,SCFD1	-4582,387367,-4582
chr11:116652650-116653640	chr11	+	116652766	116653634	True	NM_001159736,NM_001166598,NM_000040,NM_032725,NM_052968,NM_003904	chr11,chr11,chr11,chr11,chr11,chr11	-,-,+,-,-,-	BUD13,APOA5,APOC3,BUD13,APOA5,ZNF259	-9052,9552,46989,-9052,9552,5155
chr14:60075376-60076399	chr14	+	60075428	60076399	True	NM_016475,NM_206852	chr14,chr14	+,-	JKAMP,RTN1	-124318,21171
chr15:41222311-41222639	chr15	+	41222435	41222639	True	NM_019074,NM_133639	chr15,chr15	+,-	DLL4,RHOV	-955,-55948
chr7:65446309-65446775	chr7	+	65446682	65446758	True	NM_000181,NM_000048	chr7,chr7	-,+	GUSB,ASL	593,94017
chr5:159728827-159730303	chr5	+	159729079	159730173	True	NM_001445,NM_024565	chr5,chr5	+,-	FABP6,CCNJL	-72702,9461
chr19:55462834-55463209	chr19	+	55463030	55463126	True	NM_206828,NM_139176,NM_001174081,NM_001127255	chr19,chr19,chr19,chr19	-,-,+,-	NLRP7,NLRP7,NLRP2,NLRP7	-4157,-4157,13525,-4157
chr12:21721273-21721898	chr12	+	21721296	21721912	True	NM_030572,NM_021957	chr12,chr12	+,-	C12orf39,GYS2	-42091,35919
chr14:51020663-51022090	chr14	+	51020702	51021933	True	NM_181598,NM_015915,NM_198794	chr14,chr14,chr14	+,+,-	ATL1,ATL1,MAP4K5	4809,4809,-21326
chr11:62493043-62494051	chr11	+	62493067	62493853	True	NM_001079559,NR_037946,NM_173810	chr11,chr11,chr11	-,-,+	HNRNPUL2,HNRNPUL2-BSCL2,TTC9C	1054,1053,2098
chr12:49076519-49078125	chr12	+	49076962	49077916	True	NR_024266,NR_029448,NM_017822	chr12,chr12,chr12	-,+,-	LOC144438,LOC255411,C12orf41	8375,43301,-927
chr3:52476275-52476765	chr3	+	52476274	52476746	True	NM_020163,NM_007184	chr3,chr3	-,+	SEMA3G,NISCH	2347,12777
chr22:26874459-26875550	chr22	+	26874570	26875578	True	NM_152841,NM_001013694,NM_022081	chr22,chr22,chr22	-,+,-	HPS4,SRRD,HPS4	23,4271,4292
chr20:2445438-2446189	chr20	+	2445570	2446005	True	NR_003684,NM_003091,NM_080751,NM_198216	chr20,chr20,chr20,chr20	-,-,+,-	SNORD119,SNRPB,TMC2,SNRPB	-1877,5551,71247,5551
chrX:101971488-101971958	chrX	+	101971526	101971998	True	NM_030639,NM_001184875,NM_001184874,NM_001184876,NM_001004051,NM_138437,NM_001142528,NM_021992,NM_001142525,NM_001142524,NM_001142527,NM_001142526	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,+,+,-,+,+,+,+	BHLHB9,GPRASP2,GPRASP2,GPRASP2,GPRASP2,GPRASP2,BHLHB9,TMSB15A,BHLHB9,BHLHB9,BHLHB9,BHLHB9	3643,-4473,-4473,-4473,-4473,-4473,3643,-199827,3643,3643,3643,3643
chr6:42955697-42956958	chr6	+	42956107	42956881	True	NM_006245,NM_000287,NM_180976,NM_180977	chr6,chr6,chr6,chr6	+,-,+,+	PPP2R5D,PEX6,PPP2R5D,PPP2R5D	-3828,-9126,-3828,-3828
chr16:89897476-89897964	chr16	+	89897612	89897756	True	NM_032451,NM_001018112	chr16,chr16	+,-	SPIRE2,FANCA	-2756,-14547
chr11:113568944-113569400	chr11	+	113568946	113569170	True	NM_001101389,NM_030770	chr11,chr11	+,-	CLDN25,TMPRSS5	81347,7952
chr7:99813863-99814580	chr7	+	99813862	99814596	True	NM_024070,NM_152742	chr7,chr7	+,-	PVRIG,GPC2	2274,-38872
chr18:6836284-6837699	chr18	+	6836524	6837699	True	NR_034100,NM_001010000	chr18,chr18	-,+	LOC400643,ARHGAP28	92219,-2143
chr22:21637565-21637837	chr22	+	21637679	21637743	True	NR_003700,NR_024583	chr22,chr22	-,+	PI4KAP2,POM121L8P	234087,-1016
chr13:53313551-53313763	chr13	+	53313692	53313764	True	NR_031582,NM_007015,NM_001011705	chr13,chr13,chr13	+,-,-	MIR759,LECT1,LECT1	70420,233,233
chr20:971790-973607	chr20	+	971971	973476	True	NM_001040007,NM_001029871,NM_178578	chr20,chr20,chr20	-,-,+	RSPO4,RSPO4,PSMF1	9481,9481,120429
chr14:95106377-95107859	chr14	+	95106397	95107847	True	NM_173850,NR_015340	chr14,chr14	-,+	SERPINA12,SERPINA13	-122216,98
chr22:35937686-35938102	chr22	+	35937687	35938057	True	NM_005368,NM_014310	chr22,chr22	-,+	MB,RASD2	75377,-386
chr21:41028081-41028290	chr21	+	41028122	41028270	True	NR_026543,NM_006057,NM_033171,NM_033170,NM_033173,NM_033172	chr21,chr21,chr21,chr21,chr21,chr21	-,+,+,+,+,+	C21orf88,B3GALT5,B3GALT5,B3GALT5,B3GALT5,B3GALT5	-43373,983,983,983,983,983
chr3:184077402-184078067	chr3	+	184077637	184078107	True	NM_004366,NM_001171087,NM_001171088,NM_001171089,NM_006232	chr3,chr3,chr3,chr3,chr3	-,-,-,-,+	CLCN2,CLCN2,CLCN2,CLCN2,POLR2H	1334,1334,1334,1334,3086
chrX:40440622-40440838	chrX	+	40440624	40440870	True	NM_005765,NM_144970	chrX,chrX	+,-	ATP6AP2,CXorf38	-459,66005
chr3:158368664-158369651	chr3	+	158368916	158369691	True	NM_024996,NM_020169	chr3,chr3	+,-	GFM1,LXN	-6657,20843
chr1:173788092-173788649	chr1	+	173788391	173788459	True	NM_033319,NM_018122,NM_001127181,NM_001171182	chr1,chr1,chr1,chr1	-,+,-,-	CENPL,DARS2,CENPL,CENPL	5376,5337,5376,4869
chr14:94774533-94776110	chr14	+	94774710	94776140	True	NM_058237,NM_001756	chr14,chr14	+,-	PPP4R4,SERPINA6	-134113,13598
chr11:62779889-62781793	chr11	+	62780289	62781754	True	NM_001184736,NR_037193,NM_001184732,NM_001184733,NM_004254	chr11,chr11,chr11,chr11,chr11	-,+,-,-,-	SLC22A8,SLC3A2,SLC22A8,SLC22A8,SLC22A8	1613,-131170,1613,1613,1613
chr10:75175393-75176177	chr10	+	75175591	75175692	True	NM_173348,NM_001156,NM_004034	chr10,chr10,chr10	+,-,-	FAM149B1,ANXA7,ANXA7	-247765,-1750,-1750
chr7:93520121-93520358	chr7	+	93520279	93520373	True	NM_021955,NM_006528	chr7,chr7	+,-	GNGT1,TFPI2	15446,-214
chr10:17849853-17850440	chr10	+	17849935	17850107	True	NM_002438,NM_014241,NM_001009567	chr10,chr10,chr10	+,-,+	MRC1,PTPLA,MRC1L1	1254,-190562,1254
chr10:17849853-17850440	chr10	+	18096925	18097097	False	NM_002438,NM_014241,NM_001009567	chr10,chr10,chr10	+,-,+	MRC1,PTPLA,MRC1L1	1254,-437552,1254
chr10:73610864-73611089	chr10	+	73610960	73611026	True	NM_001042466,NM_001042465,NM_002778,NM_001171936	chr10,chr10,chr10,chr10	-,-,-,+	PSAP,PSAP,PSAP,CDH23	106,106,106,-39371
chr7:134467862-134468085	chr7	+	134467927	134468127	True	NM_001628,NM_033138,NM_004342,NM_033157	chr7,chr7,chr7,chr7	-,+,+,+	AKR1B1,CALD1,CALD1,CALD1	-324039,-3814,-3814,-3814
chr4:154266139-154266525	chr4	+	154266180	154266526	True	NM_032117,NR_001562	chr4,chr4	+,-	MND1,ANXA2P1	-430,-36217
chr1:159915188-159915629	chr1	+	159915302	159915660	True	NM_001135050,NM_033438,NM_001146173,NM_020125,NM_001146172,NM_020789	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,-	IGSF9,SLAMF9,SLAMF9,SLAMF8,SLAMF9,IGSF9	30,8434,8434,-118874,8434,30
chr11:34071097-34073068	chr11	+	34071352	34073044	True	NM_203364,NM_005574,NM_005898	chr11,chr11,chr11	+,-,+	CAPRIN1,LMO2,CAPRIN1	185,-157516,185
chr5:101632765-101633147	chr5	+	101633008	101633161	True	NM_000919,NM_180991	chr5,chr5	+,-	PAM,SLCO4C1	568365,-755
chr20:56136208-56138112	chr20	+	56136393	56137849	True	NM_080618,NM_002591	chr20,chr20	-,+	CTCFL,PCK1	-36239,-308
chr22:17684716-17686203	chr22	+	17684725	17685607	True	NM_177405,NM_017424,NR_024483	chr22,chr22,chr22	-,-,+	CECR1,CECR1,CECR4	-4180,5222,-44497
chr20:34285713-34286458	chr20	+	34285725	34286437	True	NM_080748,NM_001198989,NM_021100,NR_037570	chr20,chr20,chr20,chr20	+,-,-,-	ROMO1,NFS1,NFS1,NFS1	794,900,900,900
chr17:7579544-7579921	chr17	+	7579682	7579864	True	NM_001126116,NM_001126117,NM_001126115,NM_001143990	chr17,chr17,chr17,chr17	-,-,-,+	TP53,TP53,TP53,WRAP53	-871,-871,-871,9524
chr19:35261752-35262257	chr19	+	35261847	35262274	True	NM_001007248,NM_001145665	chr19,chr19	-,+	ZNF599,ZNF181	1910,-36421
chr22:30754795-30756212	chr22	+	30754838	30755661	True	NM_001005409,NM_005877,NM_001017437	chr22,chr22,chr22	-,-,+	SF3A1,SF3A1,CCDC157	-1925,-1925,-2265
chr16:30441287-30441957	chr16	+	30441477	30441761	True	NM_024096,NM_016643	chr16,chr16	-,+	DCTPP1,ZNF771	-104,-22793
chr19:8383777-8384164	chr19	+	8383922	8384098	True	NM_005001,NM_001031	chr19,chr19	-,+	NDUFA7,RPS28	2237,2285
chr19:6465154-6465927	chr19	+	6465252	6465872	True	NM_139161,NM_174881,NM_024103	chr19,chr19,chr19	+,+,-	CRB3,CRB3,SLC25A23	-1043,-1043,-5471
chr1:148556390-148556661	chr1	+	148556393	148556459	True	NM_001164262,NM_173638,NM_001170755	chr1,chr1,chr1	-,+,+	PPIAL4F,NBPF15,NBPF15	-353857,4387,1728
chrX:40691598-40691978	chrX	+	40691677	40691823	True	NR_027761,NM_001195522	chrX,chrX	-,+	LOC100132831,LOC347411	676,-208910
chr18:14747814-14748066	chr18	+	14747814	14748112	True	NM_001145029,NM_001137671	chr18,chr18	+,-	ANKRD30B,POTEC	126,-204215
chr1:226681559-226682590	chr1	+	226681580	226682273	True	NM_001618,NM_001003665	chr1,chr1	-,+	PARP1,C1orf95	-85779,54227
chr19:8512776-8513452	chr19	+	8512926	8513256	True	NM_032152,NM_005968,NM_031203	chr19,chr19,chr19	-,+,+	PRAM1,HNRNPM,HNRNPM	54340,-3174,-3174
chr6:52251481-52252899	chr6	+	52251675	52252420	True	NM_133367,NM_002388	chr6,chr6	+,-	PAQR8,MCM3	-24812,-102093
chr8:21990502-21990740	chr8	+	21990509	21990735	True	NM_005144,NM_001172357,NM_018411,NM_025232	chr8,chr8,chr8,chr8	-,+,-,-	HR,SFTPC,HR,REEP4	-1944,28448,-1944,8763
chr2:20513829-20514287	chr2	+	20513971	20514332	True	NM_015317,NM_004040	chr2,chr2	-,+	PUM2,RHOB	12868,132502
chr12:85674716-85674942	chr12	+	85674784	85674943	True	NM_001100917,NM_006982	chr12,chr12	-,+	TSPAN19,ALX1	-244729,-806
chr11:56040337-56040940	chr11	+	56040339	56040751	True	NM_001004745,NM_001005199	chr11,chr11	+,-	OR5T1,OR8H1	2363,17849
chrY:27604089-27605517	chrY	+	27604175	27605475	True	NR_002179,NR_002195,NR_001555	chrY,chrY,chrY	-,+,+	TTTY17C,GOLGA2P3Y,GOLGA2P2Y	-273255,-2768,-2768
chrY:27604089-27605517	chrY	-	26356960	26358260	False	NR_002195,NR_001526,NR_001555	chrY,chrY,chrY	-,+,-	GOLGA2P3Y,TTTY17A,GOLGA2P2Y	2768,273218,2768
chr10:104211386-104212094	chr10	+	104211427	104211805	True	NM_024789,NM_024886	chr10,chr10	+,-	TMEM180,C10orf95	9364,-127
chr15:88797645-88797908	chr15	+	88797712	88797822	True	NM_002530,NM_001012338,NM_022839,NM_001007156	chr15,chr15,chr15,chr15	-,-,+,-	NTRK3,NTRK3,MRPS11,NTRK3	1889,1889,212861,1889
chr17:79211678-79212272	chr17	+	79211730	79212128	True	NM_144679,NM_001086521	chr17,chr17	-,+	C17orf56,C17orf89	813,982
chr20:31671446-31671759	chr20	+	31671538	31671670	True	NM_182519,NM_080675	chr20,chr20	+,-	C20orf186,SUN5	-2271,-79299
chrX:7898740-7899474	chrX	+	7898741	7899491	True	NM_001142389,NM_001172672,NM_013452,NM_004650	chrX,chrX,chrX,chrX	-,-,+,-	PNPLA4,PNPLA4,VCX,PNPLA4	-2961,-2961,-88489,-3266
chr17:63555488-63555715	chr17	+	63555637	63555763	True	NM_004655,NM_003835	chr17,chr17	-,+	AXIN2,RGS9	2027,-422232
chr6:111300376-111301254	chr6	+	111300502	111301293	True	NM_032194,NR_002932	chr6,chr6	+,-	RPF2,GSTM2P1	1997,67514
chr16:67143407-67143800	chr16	+	67143488	67143710	True	NM_025187,NM_033309	chr16,chr16	+,-	C16orf70,B3GNT9	204,41242
chrY:6779217-6779435	chrY	+	6779302	6779408	True	NM_001143,NM_134259,NM_134258,NM_033284	chrY,chrY,chrY,chrY	-,+,+,+	AMELY,TBL1Y,TBL1Y,TBL1Y	-37234,-626,-626,-626
chr16:67215237-67216074	chr16	+	67215287	67215873	True	NM_178516,NM_003946,NM_001040715,NM_001185057	chr16,chr16,chr16,chr16	-,+,-,+	EXOC3L1,NOL3,KIAA0895L,NOL3	8284,-7589,2060,-7580
chr6:84217914-84218523	chr6	+	84217916	84218548	True	NM_002395,NM_001170423,NM_153362	chr6,chr6,chr6	-,+,+	ME1,PRSS35,PRSS35	-76978,3645,3645
chr4:75028542-75029683	chr4	+	75028719	75029579	True	NM_002089,NM_001144978	chr4,chr4	-,+	CXCL2,MTHFD2L	-63722,-4947
chr8:37410683-37411026	chr8	+	37410721	37411075	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	142225,194539
chr4:41999959-42000571	chr4	+	42000004	42000393	True	NM_006345,NM_001159547	chr4,chr4	+,-	SLC30A9,BEND4	-7533,154559
chr14:91590430-91590909	chr14	+	91590598	91590843	True	NM_001102367,NR_003709,NM_182398	chr14,chr14,chr14	+,+,-	C14orf159,SNORA11B,RPS6KA5	-9670,1926,-63605
chr5:175085728-175086105	chr5	+	175085790	175086040	True	NM_001131055,NM_000794	chr5,chr5	+,-	HRH2,DRD1	-801,-214627
chr2:85785693-85786142	chr2	+	85785764	85786093	True	NM_003761,NM_001142269,NM_000821	chr2,chr2,chr2	+,-,-	VAMP8,GGCX,GGCX	18520,2614,2614
chr2:54312478-54313375	chr2	+	54312504	54313083	True	NM_014614,NM_138448	chr2,chr2	-,+	PSME4,ACYP2	-114527,29326
chr1:67634678-67635531	chr1	+	67634843	67635563	True	NM_001013674,NM_144701	chr1,chr1	-,+	C1orf141,IL23R	-40623,-2733
chr9:133709229-133710104	chr9	+	133709236	133710092	True	NM_005157,NM_198180	chr9,chr9	+,-	ABL1,QRFP	738,59183
chr7:27214900-27215119	chr7	+	27214912	27215150	True	NM_005523,NM_018951,NR_037940,NR_037939,NR_029911,NM_153715,NR_002795,NM_152739	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,-,+,-	HOXA11,HOXA10,HOXA10-HOXA9,HOXA10,MIR196B,HOXA10,HOXA11-AS1,HOXA9	9735,-957,4780,4780,-5730,4776,9876,-9763
chr14:21572368-21572570	chr14	+	21572367	21572587	True	NM_016423,NM_001101672,NM_001146683,NM_001102454	chr14,chr14,chr14,chr14	-,-,+,-	ZNF219,ZNF219,C14orf176,ZNF219	-5559,-5194,-5322,326
chr3:10353691-10353896	chr3	+	10353829	10353901	True	NM_001136232,NR_024272,NM_183352,NR_024273,NR_024146	chr3,chr3,chr3,chr3,chr3	-,-,-,-,+	SEC13,SEC13,SEC13,SEC13,GHRLOS	8878,9011,9008,9011,-26444
chr10:76585722-76586076	chr10	+	76585741	76586114	True	NM_001003892,NM_012330	chr10,chr10	-,+	DUPD1,MYST4	232208,264
chr11:68049891-68050142	chr11	+	68049933	68050167	True	NM_022338,NM_002335	chr11,chr11	-,+	C11orf24,LRP5	-10464,29940
chr20:43587323-43588719	chr20	+	43587327	43588478	True	NM_006809,NM_006282	chr20,chr20	-,+	TOMM34,STK4	686,6641
chr11:58869426-58869939	chr11	+	58869430	58869916	True	NM_001142704,NR_033853,NM_001142703,NM_198947	chr11,chr11,chr11,chr11	+,-,+,+	FAM111B,LOC283194,FAM111B,FAM111B	4741,-43505,4741,4741
chr22:29663153-29663426	chr22	+	29663234	29663466	True	NM_012265,NM_005243,NM_013986,NM_001163285,NM_001163287,NM_001163286	chr22,chr22,chr22,chr22,chr22,chr22	-,+,+,+,+,+	RHBDD3,EWSR1,EWSR1,EWSR1,EWSR1,EWSR1	498,531,531,531,531,531
chr11:94318153-94319402	chr11	+	94318622	94319451	True	NM_005591,NM_152431	chr11,chr11	-,+	MRE11A,PIWIL4	-91582,-18206
chr19:44862226-44863370	chr19	+	44862502	44863358	True	NM_001083335,NM_013380,NM_181756	chr19,chr19,chr19	-,-,+	ZFP112,ZFP112,ZNF233	-1646,-1646,-98489
chr19:46295271-46295685	chr19	+	46295412	46295648	True	NM_004943,NM_004409,NM_001081560,NM_004497,NM_001081562	chr19,chr19,chr19,chr19,chr19	-,-,-,+,-	DMWD,DMPK,DMPK,FOXA3,DMPK	462,-9597,-9597,71869,-9597
chr4:3547294-3549147	chr4	+	3548535	3548844	True	NM_002337,NM_173660	chr4,chr4	-,+	LRPAP1,DOK7	-14311,-83553
chr19:42944626-42945009	chr19	+	42944693	42945003	True	NM_198477,NM_001410	chr19,chr19	-,+	CXCL17,MEGF8	2183,-114983
chr10:105212678-105213470	chr10	+	105212714	105213485	True	NR_024552,NM_015916,NM_004210,NM_001001412	chr10,chr10,chr10,chr10	-,-,+,-	CALHM2,CALHM2,NEURL,CALHM1	-552,-552,40249,5213
chr1:16958720-16959179	chr1	+	16958776	16959118	True	NR_026752,NR_027504	chr1,chr1	-,+	CROCCP2,MST1P2	-1375,12950
chr1:16958720-16959179	chr1	+	16812290	16812340	False	NR_023386,NM_018090	chr1,chr1	-,+	CROCCP3,NECAP2	6906,-45174
chr6:64287552-64288032	chr6	+	64287900	64288074	True	NM_016571,NM_003463	chr6,chr6	-,+	LGSN,PTP4A1	-258018,-6038
chr11:46741754-46742104	chr11	+	46741757	46742117	True	NM_000506,NM_004308	chr11,chr11	+,-	F2,ARHGAP1	-1065,-19637
chr1:156542651-156543448	chr1	+	156542656	156543164	True	NM_001105669,NM_178229	chr1,chr1	+,-	TTC24,IQGAP3	6354,-260
chr20:4227636-4228135	chr20	+	4227798	4228100	True	NM_000678,NR_033917	chr20,chr20	-,+	ADRA1D,LOC728228	1609,-54112
chr11:118433044-118433584	chr11	+	118433296	118433374	True	NM_020153,NM_001142281,NM_001168618,NM_001655	chr11,chr11,chr11,chr11	-,+,-,+	IFT46,ARCN1,IFT46,ARCN1	3467,9727,3467,9727
chr1:12224326-12225312	chr1	+	12224358	12225244	True	NM_001066,NM_138346	chr1,chr1	+,-	TNFRSF1B,KIAA2013	1815,-237873
chr11:63279155-63279825	chr11	+	63279286	63279866	True	NM_001142536,NM_001142537,NM_001142535,NM_033101,NM_001142538,NM_054108	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,-	LGALS12,LGALS12,LGALS12,LGALS12,LGALS12,HRASLS5	-5813,-3878,-5813,-5813,-3878,-20606
chr17:76999076-76999456	chr17	+	76999159	76999446	True	NM_001159772,NM_001159773,NM_138793,NM_030968	chr17,chr17,chr17,chr17	-,-,-,+	CANT1,CANT1,CANT1,C1QTNF1	6504,6504,6504,20804
chr5:95190032-95190768	chr5	+	95190155	95190631	True	NR_026936,NM_002064	chr5,chr5	+,-	C5orf27,GLRX	-2270,-31578
chr6:30883760-30883984	chr6	+	30883860	30883930	True	NM_205854,NM_001167733,NM_020442,NM_001167734,NM_001517	chr6,chr6,chr6,chr6,chr6	-,+,+,+,+	SFTA2,VARS2,VARS2,VARS2,GTF2H4	16072,-1929,-1929,-1803,-7934
chr6:30883760-30883984	chr6_mann_hap4	+	2231939	2232009	False	NM_205854,NM_001167733,NM_020442,NM_001167734,NM_001517	chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4,chr6_mann_hap4	-,+,+,+,+	SFTA2,VARS2,VARS2,VARS2,GTF2H4	16074,-1929,-1929,-1803,-7934
chr1:949559-949891	chr1	+	949579	949933	True	NM_005101,NM_001142467,NM_198576	chr1,chr1,chr1	+,-,+	ISG15,HES4,AGRN	-783,-14027,5569
chr7:127256686-127258360	chr7	+	127256691	127257702	True	NM_006193,NM_020369	chr7,chr7	-,+	PAX4,FSCN3	-911,-23053
chr10:88124873-88125087	chr10	+	88124941	88125113	True	NM_017551,NM_001030015	chr10,chr10	-,+	GRID1,OPN4	1187,289200
chr14:65171269-65171485	chr14	+	65171320	65171502	True	NM_015549,NM_001024858	chr14,chr14	+,-	PLEKHG3,SPTB	-178,118414
chr7:129986675-129987154	chr7	+	129986740	129987182	True	NM_001127442,NM_001127441,NM_080385,NM_018718	chr7,chr7,chr7,chr7	+,+,+,-	CPA5,CPA5,CPA5,TSGA14	-2161,-2161,-2161,93722
chr11:112037517-112037784	chr11	+	112037529	112037765	True	NM_001562,NM_031938,NM_001037290,NM_031275	chr11,chr11,chr11,chr11	-,+,+,+	IL18,BCO2,BCO2,TEX12	-2689,8442,9323,329
chr21:40030360-40031345	chr21	+	40030364	40031315	True	NM_005239,NM_004449,NM_001136154	chr21,chr21,chr21	+,-,-	ETS2,ERG,ERG	146533,2439,2439
chr4:110633811-110634138	chr4	+	110634014	110634174	True	NM_018983,NM_001226,NM_032992	chr4,chr4,chr4	+,-,-	GAR1,CASP6,CASP6	102491,-9385,-9385
chr6:35993161-35994823	chr6	+	35993260	35994799	True	NM_052961,NM_001193476,NM_001315,NM_139014,NM_139013,NM_139012,NM_138718	chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,-,+,+,+,+,-	SLC26A8,SLC26A8,MAPK14,MAPK14,MAPK14,MAPK14,SLC26A8	-847,-955,654,654,654,654,-983
chr14:48143631-48143850	chr14	+	48143644	48143822	True	NR_037792,NM_001113498	chr14,chr14	+,-	LRR1,MDGA2	1921592,385
chr5:139945883-139946897	chr5	+	139945899	139946857	True	NM_133172,NM_001035235,NM_133174,NM_133173,NM_080670,NM_006051	chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,+,-	APBB3,SRA1,APBB3,APBB3,SLC35A4,APBB3	-1710,-8221,-1710,-1710,-1530,-1710
chr22:50999724-51000342	chr22	+	50999815	51000285	True	NM_001123225,NM_138433	chr22,chr22	-,+	C22orf41,KLHDC7B	1093,-13404
chrX:120124315-120126310	chrX	+	120124359	120125937	True	NM_012084,NM_001080139,NM_001080138,NM_001080137,NM_173571,NM_001080146,NM_001080144,NM_001080145,NM_001080142,NM_001080143,NM_001080141	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,-,-,-,-,-,-,-,-,-,-	GLUD2,CT47A8,CT47A9,CT47A10,CT47A11,CT47A1,CT47A3,CT47A2,CT47A5,CT47A4,CT47A6	55524,-9581,-9581,-9581,-9581,-4721,-9581,-9581,-9581,-9581,-4721
chr6:49429404-49430954	chr6	+	49429678	49430830	True	NM_000255,NM_018132	chr6,chr6	-,+	MUT,CENPQ	261,265
chr10:126106291-126106592	chr10	+	126106294	126106640	True	NM_000274,NM_001171814,NM_001167880	chr10,chr10,chr10	-,-,+	OAT,OAT,LHPP	955,955,43700
chr19:37020828-37021406	chr19	+	37020849	37021322	True	NM_001012756,NM_001166036,NM_001166037,NR_036504,NM_001166038	chr19,chr19,chr19,chr19,chr19	-,-,-,+,-	ZNF260,ZNF260,ZNF260,LOC728752,ZNF260	-1601,-1601,-1601,-40377,-1601
chr11:74858541-74860099	chr11	+	74858659	74860057	True	NM_001005285,NM_001145212,NM_007256	chr11,chr11,chr11	-,+,+	OR2AT4,SLCO2B1,SLCO2B1	-57901,1974,1974
chr1:167598237-167598512	chr1	+	167598243	167598479	True	NM_052862,NM_003851	chr1,chr1	+,-	RCSD1,CREG1	994,-75187
chr4:20859551-20860727	chr4	+	20860079	20860714	True	NM_147181,NM_145048	chr4,chr4	-,+	KCNIP4,PACRGL	-7788,-158095
chr5:168004497-168005661	chr5	+	168004677	168005669	True	NM_024594,NR_031721	chr5,chr5	-,+	PANK3,MIR103-1AS	996,-16824
chr16:20552210-20553095	chr16	+	20552245	20552901	True	NM_001105069,NM_001010845	chr16,chr16	-,+	ACSM2B,ACSM2A	34852,-89437
chr9:4285712-4286318	chr9	+	4285721	4286293	True	NM_001042413,NM_004170	chr9,chr9	-,+	GLIS3,SLC1A1	13792,204133
chr3:129326092-129326319	chr3	+	129326113	129326317	True	NM_153833,NM_015103	chr3,chr3	+,-	H1FOO,PLXND1	-64107,-531
chr8:146053870-146055688	chr8	+	146053991	146055335	True	NM_001081004,NM_003416	chr8,chr8	-,+	COMMD5,ZNF7	23166,-1140
chr8:142349863-142350376	chr8	+	142349922	142350351	True	NR_024441,NM_005293	chr8,chr8	+,-	LOC731779,GPR20	296,27070
chr1:235324647-235326095	chr1	+	235324680	235325071	True	NM_001037277,NM_015014,NR_027762,NM_001161533	chr1,chr1,chr1,chr1	+,-,-,-	GGPS1,RBM34,RBM34,RBM34	166681,-109,-109,-109
chr12:46766246-46766447	chr12	+	46766277	46766491	True	NM_152641,NM_018976	chr12,chr12	+,-	ARID2,SLC38A2	-642708,204
chr19:19638586-19638947	chr19	+	19638682	19638962	True	NM_032037,NM_001190328,NM_198537	chr19,chr19,chr19	-,+,+	TSSK6,YJEFN3,YJEFN3	-12213,707,707
chr11:69197282-69198495	chr11	+	69197421	69198319	True	NM_153451,NM_138768	chr11,chr11	-,+	ORAOV1,MYEOV	291896,-135850
chr12:102004628-102004918	chr12	+	102004686	102004953	True	NM_206821,NM_001177948	chr12,chr12	+,-	MYBPC1,SYCP3	-15990,128348
chr7:21258434-21259666	chr7	+	21258706	21259595	True	NM_198956,NM_003112	chr7,chr7	-,+	SP8,SP4	-432198,208093
chr1:152192785-152193160	chr1	+	152192850	152193208	True	NM_001009931,NM_178438	chr1,chr1	-,+	HRNR,LCE5A	3511,290111
chr15:52405031-52405332	chr15	+	52405036	52405188	True	NM_002748,NM_020396	chr15,chr15	+,-	MAPK6,BCL2L10	-93676,-64
chr6:88186627-88187880	chr6	+	88186827	88187899	True	NM_006416,NM_020320,NM_001168398	chr6,chr6,chr6	+,-,+	SLC35A1,RARS2,SLC35A1	-4237,111893,-4237
chr20:57268298-57268667	chr20	+	57268496	57268690	True	NR_029844,NM_024663,NM_001204873,NM_001204872	chr20,chr20,chr20,chr20	-,+,+,+	MIR296,NPEPL1,NPEPL1,NPEPL1	124109,-685,-4360,-4360
chr7:149573387-149574273	chr7	+	149573469	149574310	True	NM_001100592,NM_145230,NR_027040	chr7,chr7,chr7	+,+,-	ATP6V0E2,ATP6V0E2,LOC401431	-3464,-3464,-2518
chr9:125512267-125512491	chr9	+	125512323	125512443	True	NM_005388,NM_001004453	chr9,chr9	-,+	PDCL,OR1L6	78542,-249
chr9:125512267-125512491	chr9	+	125486465	125486517	False	NM_001004450,NM_001005235	chr9,chr9	-,+	OR1B1,OR1L4	-94651,-249
chrY:2657506-2657808	chrY	+	2657548	2657773	True	NR_003254,NM_003140	chrY,chrY	+,-	XGPY2,SRY	-37265,-1756
chr16:46849687-46851522	chr16	+	46850358	46851110	True	NM_133443,NM_001001436	chr16,chr16	+,-	GPT2,C16orf87	67197,14015
chr1:61547387-61547630	chr1	+	61547434	61547564	True	NM_001145511,NM_005595,NM_001145512,NM_032027,NM_001134673	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	NFIA,NFIA,NFIA,TM2D1,NFIA	-4539,415,-5,643581,415
chr20:60879071-60879321	chr20	+	60879197	60879283	True	NM_007002,NM_175573,NM_005560	chr20,chr20,chr20	+,+,-	ADRM1,ADRM1,LAMA5	-1228,-1228,63135
chr2:241623949-241624201	chr2	+	241624009	241624151	True	NM_198998,NM_001102467	chr2,chr2	+,-	AQP12A,AQP12B	7110,-1692
chr2:241623949-241624201	chr2	-	241629437	241629497	False	NM_198998,NM_001102467	chr2,chr2	+,-	AQP12A,AQP12B	1764,-7120
chr1:55350504-55352243	chr1	+	55350649	55352050	True	NM_014762,NM_152607	chr1,chr1	-,+	DHCR24,C1orf177	928,-78964
chr4:39047233-39048892	chr4	+	39047268	39048764	True	NM_024943,NM_001171654,NM_001007075	chr4,chr4,chr4	-,+,+	TMEM156,KLHL5,KLHL5	-13227,-869,-869
chr4:86753836-86754231	chr4	+	86753893	86754284	True	NM_001042669,NM_138981	chr4,chr4	+,-	ARHGAP24,MAPK10	-54099,274577
chr1:144676593-144677526	chr1	+	144676646	144677441	True	NR_037182,NM_001037675	chr1,chr1	-,+	LOC653513,NBPF9	2643,-61738
chr1:144676593-144677526	chr1	+	144951973	144952768	False	NM_004892,NM_001002811	chr1,chr1	+,-	SEC22B,PDE4DIP	143638,-19941
chr5:84763171-84763683	chr5	+	84763208	84763475	True	NM_005711,NR_003719	chr5,chr5	-,+	EDIL3,NBPF22P	-1082597,814786
chr11:748006-748276	chr11	+	748047	748181	True	NM_006755,NM_182612	chr11,chr11	+,-	TALDO1,PDDC1	-666,29356
chr1:156698526-156698746	chr1	+	156698573	156698781	True	NM_001142560,NM_015997,NM_030980	chr1,chr1,chr1	+,+,-	RRNAD1,RRNAD1,ISG20L2	-361,-361,-868
chr12:57410263-57410766	chr12	+	57410299	57410667	True	NR_033654,NM_007264,NM_013251,NM_001178054	chr12,chr12,chr12,chr12	-,+,-,-	TAC3,GPR182,TAC3,TAC3	45,-21995,45,45
chr20:24932656-24932974	chr20	+	24932768	24933014	True	NM_003650,NM_020531	chr20,chr20	+,-	CST7,C20orf3	-2973,40461
chr9:98278141-98278411	chr9	+	98278353	98278419	True	NM_001010895,NM_001083607,NM_001083602,NM_001083603,NM_001083604,NM_001083605,NM_001083606,NM_000264	chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9	+,-,-,-,-,-,-,-	C9orf102,PTCH1,PTCH1,PTCH1,PTCH1,PTCH1,PTCH1,PTCH1	359480,-8872,878,878,-8031,-8031,-8654,-7522
chr7:73586263-73588161	chr7	+	73586656	73588072	True	NM_002914,NM_031992,NM_022170	chr7,chr7,chr7	-,+,+	RFC2,EIF4H,EIF4H	80716,633,633
chr11:130030909-130031319	chr11	+	130030920	130031324	True	NM_014155,NM_021978	chr11,chr11	-,+	ZBTB44,ST14	153333,-1289
chr2:23653628-23654339	chr2	+	23653642	23654228	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	495756,-45395
chr11:118978933-118979649	chr11	+	118978937	118979693	True	NM_014807,NM_001382	chr11,chr11	+,-	C2CD2L,DPAGT1	-895,-6152
chr7:155606517-155606726	chr7	+	155606550	155606704	True	NM_000193,NM_053043	chr7,chr7	-,+	SHH,RBM33	-1583,-169398
chr2:213401702-213401931	chr2	+	213401711	213401865	True	NM_001042599,NM_005235,NM_001025436	chr2,chr2,chr2	-,-,+	ERBB4,ERBB4,SPAG16	1537,1537,747250
chr5:170738437-170738648	chr5	+	170738445	170738605	True	NM_021025,NR_037474	chr5,chr5	+,-	TLX3,MIR3912	-2208,75209
chr15:34678773-34679753	chr15	+	34678833	34679566	True	NM_175741,NR_036050,NM_181077,NR_036261	chr15,chr15,chr15,chr15	+,-,-,-	C15orf55,MIR1233-1,GOLGA8A,MIR1233-2	-40818,-4482,2492,-4482
chr15:34678773-34679753	chr15	+	34825054	34825787	False	NR_036050,NM_175741,NM_001023567,NR_036261	chr15,chr15,chr15,chr15	-,+,-,-	MIR1233-1,C15orf55,GOLGA8B,MIR1233-2	-4482,-187039,2492,-4482
chr19:15563202-15563536	chr19	+	15563248	15563584	True	NR_031716,NM_021241	chr19,chr19	+,-	MIR1470,WIZ	-2940,-2486
chr11:6637289-6637729	chr11	+	6637299	6637689	True	NM_001014795,NM_000391,NM_006284	chr11,chr11,chr11	+,-,-	ILK,TPP1,TAF10	-12151,3053,-3854
chr3:101290509-101291234	chr3	+	101290568	101291199	True	NM_020654,NM_020357,NM_017819	chr3,chr3,chr3	-,+,+	SENP7,PCNP,RG9MTD1	-58483,1842,-9913
chr11:111413878-111414597	chr11	+	111414057	111414561	True	NM_178834,NM_017589	chr11,chr11	+,-	LAYN,BTG4	-2876,-30993
chr14:74559542-74560119	chr14	+	74559954	74560029	True	NM_005589,NM_001024674	chr14,chr14	-,+	ALDH6A1,LIN52	-8758,-8356
chr10:88715782-88717152	chr10	+	88715803	88716993	True	NM_003087,NM_024756	chr10,chr10	+,-	SNCG,MMRN2	1294,482
chr1:207139889-207141404	chr1	+	207140162	207141389	True	NM_001122979,NM_006850,NM_032029,NM_001170631	chr1,chr1,chr1,chr1	-,+,-,-	FCAMR,IL24,FCAMR,FCAMR	2642,-69425,2642,2642
chr16:25228707-25229920	chr16	+	25228844	25229842	True	NM_001012981,NM_001169	chr16,chr16	-,+	ZKSCAN2,AQP8	39063,-610
chr8:134582022-134582239	chr8	+	134582084	134582224	True	NM_003033,NR_037944,NM_173344	chr8,chr8,chr8	-,+,-	ST3GAL1,WISP1,ST3GAL1	2009,-378853,2009
chr2:50573492-50573849	chr2	+	50573560	50573892	True	NM_138735,NM_006872	chr2,chr2	-,+	NRXN1,GTF2A1L	1052,-1728674
chr20:9086674-9088089	chr20	+	9087058	9087902	True	NM_001172646,NM_020341	chr20,chr20	+,-	PLCB4,PAK7	-37420,731845
chr8:59407615-59407875	chr8	+	59407713	59407775	True	NM_000780,NM_001007067	chr8,chr8	-,+	CYP7A1,SDCBP	4995,57952
chr12:125470760-125471621	chr12	+	125470760	125470987	True	NM_032656,NM_080626	chr12,chr12	-,+	DHX37,BRI3BP	2737,7206
chr6:41708836-41709103	chr6	+	41708843	41709103	True	NM_001167827,NM_007162,NM_013397,NM_001166424,NM_002630	chr6,chr6,chr6,chr6,chr6	-,-,+,-,-	TFEB,TFEB,PRICKLE4,PGC,PGC	-4846,-6045,39396,6086,6086
chr1:29063956-29064209	chr1	+	29064060	29064214	True	NM_016258,NM_005644,NM_001173128,NM_001172828	chr1,chr1,chr1,chr1	+,-,+,+	YTHDF2,TAF12,YTHDF2,YTHDF2	-975,-94456,-978,-659
chr19:51567667-51568094	chr19	+	51567817	51567997	True	NM_015596,NM_014441	chr19,chr19	-,+	KLK13,SIGLEC9	420,60139
chr22:24033710-24034599	chr22	+	24033712	24034636	True	NM_153615,NR_024448	chr22,chr22	+,-	RGL4,LOC91316	-715,25024
chr16:57519985-57520230	chr16	+	57519986	57520128	True	NM_018110,NM_032940	chr16,chr16	-,+	DOK4,POLR2C	307,-23486
chr16:58663049-58663340	chr16	+	58663105	58663269	True	NM_016284,NM_206999,NM_024860	chr16,chr16,chr16	-,-,+	CNOT1,CNOT1,SETD6	531,531,-113773
chr20:42838110-42838606	chr20	+	42838169	42838566	True	NM_024034,NM_016470	chr20,chr20	+,-	GDAP1L1,C20orf111	37341,915
chr14:24803477-24803834	chr14	+	24803480	24803827	True	NM_139247,NM_181657,NM_001198592,NM_001198568,NM_006871	chr14,chr14,chr14,chr14,chr14	-,+,-,-,-	ADCY4,LTB4R,ADCY4,ADCY4,RIPK3	500,-21218,500,500,5465
chr4:39048892-39049560	chr4	+	39049130	39049588	True	NM_024943,NM_001171654,NM_001007075	chr4,chr4,chr4	-,+,+	TMEM156,KLHL5,KLHL5	-15089,-2735,-2735
chr20:328891-330431	chr20	+	329024	330182	True	NM_153269,NM_024958	chr20,chr20	-,+	C20orf96,NRSN2	-57634,-1705
chr17:45975504-45977040	chr17	+	45975767	45976902	True	NM_003110,NM_199262	chr17,chr17	+,-	SP2,SP6	-2302,-42527
chrX:104463558-104464071	chrX	+	104463575	104464091	True	NM_031274,NM_198465	chrX,chrX	-,+	TEX13A,NRK	1317,602444
chr19:35840928-35841231	chr19	+	35841097	35841251	True	NM_005303,NM_152481,NM_005304	chr19,chr19,chr19	+,-,+	FFAR1,FAM187B,FFAR3	1193,-121469,8236
chr17:7554001-7554340	chr17	+	7554120	7554386	True	NM_001678,NM_133491	chr17,chr17	+,-	ATP1B2,SAT2	-3,-22926
chr10:18428024-18428475	chr10	+	18428232	18428363	True	NM_201593,NM_201596,NM_201597,NM_001167945,NM_201572,NM_201571,NM_182543	chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,+,-	CACNB2,CACNB2,CACNB2,CACNB2,CACNB2,CACNB2,NSUN6	1242,1242,1242,1378,1378,1378,512244
chr1:223204378-223204961	chr1	+	223204383	223204813	True	NM_032890,NM_003268	chr1,chr1	+,-	DISP1,TLR5	-216004,111861
chr10:95654358-95654750	chr10	+	95654360	95654767	True	NR_002319,NM_001134658,NM_153226	chr10,chr10,chr10	-,+,+	PIPSL,TMEM20,TMEM20	66955,-681,-681
chr14:24899737-24900074	chr14	+	24899803	24900019	True	NM_001039771,NM_015299	chr14,chr14	-,+	CBLN3,KHNYN	-1072,-713
chr19:4910796-4911157	chr19	+	4910812	4911205	True	NM_001080523,NM_001048201,NM_013282	chr19,chr19,chr19	-,+,+	ARRDC5,UHRF1,UHRF1	-7933,-1353,-297
chr3:101397058-101397326	chr3	+	101397117	101397179	True	NM_000986,NR_024407,NM_014415	chr3,chr3,chr3	-,+,-	RPL24,LOC100009676,ZBTB11	8434,-1896,-1129
chr8:101572560-101573282	chr8	+	101572566	101573103	True	NM_198401,NM_003114	chr8,chr8	-,+	ANKRD46,SPAG1	-554,-402054
chr1:213126132-213127853	chr1	+	213126265	213127718	True	NM_001136474,NM_001136475,NM_144567,NM_024749	chr1,chr1,chr1,chr1	+,+,-,+	VASH2,VASH2,ANGEL2,VASH2	-2430,-2430,61500,-2430
chr7:43913777-43914579	chr7	+	43913796	43914551	True	NM_032014,NM_015983	chr7,chr7	-,+	MRPS24,UBE2D4	-4651,51483
chr11:8680331-8680727	chr11	+	8680417	8680767	True	NM_000990,NM_014818	chr11,chr11	+,-	RPL27A,TRIM66	23227,-34
chr1:182921257-182921849	chr1	+	182921417	182921871	True	NM_030933,NM_002293	chr1,chr1	-,+	SHCBP1L,LAMC1	732,70723
chr10:46900884-46901324	chr10	+	46900968	46901234	True	NR_027632,NM_181519	chr10,chr10	+,-	FAM35B,SYT15	-3390,69425
chr10:46900884-46901324	chr10	+	88914636	88914695	False	NM_019054,NM_005271	chr10,chr10	+,-	FAM35A,GLUD1	-59743,-59860
chr10:46900884-46901324	chr10	+	47383213	47383312	False	NR_024495,NR_027634	chr10,chr10	-,+	LOC642826,FAM35B2	-139719,-3552
chr10:46900884-46901324	chr10	+	49090886	49090984	False	NM_001137548,NM_002750	chr10,chr10	-,+	FAM25C,MAPK8	116899,518702
chr14:24626929-24627198	chr14	+	24627089	24627219	True	NM_006084,NM_002818	chr14,chr14	+,-	IRF9,PSME2	3202,-11234
chr9:69724493-69724794	chr9	+	69724602	69724652	True	NM_001126334,NR_024443	chr9,chr9	-,+	FOXD4L5,LOC100133920	454213,-73292
chr9:69724493-69724794	chr9	-	66957728	66957778	False	NR_024443,NR_024496	chr9,chr9	-,+	LOC100133920,LOC442421	73254,-463510
chr4:138450986-138452461	chr4	+	138451008	138452450	True	NM_012118,NM_019035	chr4,chr4	+,-	CCRN4L,PCDH18	1484492,1229
chr11:64880765-64881049	chr11	+	64880770	64881082	True	NM_001997,NR_037568,NR_037567,NM_014205,NM_003273,NM_004927	chr11,chr11,chr11,chr11,chr11,chr11	-,+,+,-,+,+	FAU,MRPL49,MRPL49,ZNHIT2,TM7SF2,MRPL49	8640,8633,8572,4138,-1480,8633
chr2:101892196-101893736	chr2	+	101892318	101893774	True	NR_003070,NM_017546	chr2,chr2	-,+	SNORD89,C2orf29	-2807,-23031
chr19:21263236-21264224	chr19	+	21263430	21264221	True	NM_182515,NM_021269	chr19,chr19	+,-	ZNF714,ZNF708	731,248041
chr1:42383934-42384156	chr1	+	42383943	42384077	True	NM_024503,NM_007102,NM_001127714	chr1,chr1,chr1	-,+,-	HIVEP3,GUCA2B,HIVEP3	469,235014,469
chr10:103533954-103534418	chr10	+	103534010	103534402	True	NM_006993,NM_033164,NM_033165,NM_033163,NR_036114,NM_006119	chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,+,-	NPM3,FGF8,FGF8,FGF8,MIR3158-1,FGF8	8818,1407,1407,1407,-172890,1407
chr12:22093744-22093958	chr12	+	22093802	22094006	True	NM_020298,NM_018686,NM_020297,NM_005691	chr12,chr12,chr12,chr12	-,+,-,-	ABCC9,CMAS,ABCC9,ABCC9	-4174,105152,-4174,-4174
chr13:51685120-51685487	chr13	+	51685138	51685520	True	NR_003923,NM_145019	chr13,chr13	-,+	GUCY1B2,FAM124A	-44845,110986
chr3:10072555-10073041	chr3	+	10072743	10072901	True	NR_002786,NM_033084,NM_001018115	chr3,chr3,chr3	-,+,+	CIDECP,FANCD2,FANCD2	-4923,-4685,-4685
chr8:145019615-145019914	chr8	+	145019721	145019911	True	NM_000837,NR_030383,NM_201379,NM_201384,NM_201381,NM_201380,NM_201383,NM_201382	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	+,-,-,-,-,-,-,-	GRINA,MIR661,PLEC,PLEC,PLEC,PLEC,PLEC,PLEC	44314,-274,8227,-5963,-816,5183,-3029,-1611
chr9:91151086-91151761	chr9	+	91151217	91151799	True	NM_001161625,NM_145283,NM_001100111	chr9,chr9,chr9	+,+,-	NXNL2,NXNL2,LOC286238	-1252,-1252,115326
chr9:90998179-90999218	chr9	+	90998492	90999060	True	NM_006717,NM_001166137	chr9,chr9	+,-	SPIN1,FAM75C2	4236,-248592
chr1:26199104-26200465	chr1	+	26199415	26200064	True	NM_178422,NM_001099626	chr1,chr1	-,+	PAQR7,FAM54B	-1671,-52148
chr16:25702298-25702899	chr16	+	25702303	25702877	True	NM_001012981,NM_006040	chr16,chr16	-,+	ZKSCAN2,HS3ST4	-433448,469
chr22:39711964-39712692	chr22	+	39712256	39712556	True	NM_001033853,NM_000967,NR_000028,NR_002439,NR_000026,NR_000027,NM_145731	chr22,chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,-,-,+	RPL3,RPL3,SNORD83B,SNORD43,RNU86,SNORD83A,SYNGR1	3164,3164,-2340,2612,395,-944,33397
chr9:98269743-98270154	chr9	+	98269748	98270169	True	NM_001010895,NM_001083607,NM_001083602,NM_001083603,NM_001083604,NM_001083605,NM_001083606,NM_000264	chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9	+,-,-,-,-,-,-,-	C9orf102,PTCH1,PTCH1,PTCH1,PTCH1,PTCH1,PTCH1,PTCH1	367730,-267,9128,9128,203,203,-49,712
chr17:21437229-21437449	chr17	+	21437243	21437361	True	NM_001113434,NM_001194958	chr17,chr17	-,+	C17orf51,KCNJ18	17630,-128846
chr10:51546616-51547308	chr10	+	51546790	51547333	True	NM_001077685,NM_138634,NM_002443	chr10,chr10,chr10	-,+,+	AGAP7,MSMB,MSMB	-60463,2219,2219
chrX:2996271-2996999	chrX	+	2996832	2997048	True	NM_000047,NM_004042	chrX,chrX	-,+	ARSE,ARSF	-114338,-12053
chr15:30303845-30305386	chr15	+	30304405	30305421	True	NR_026859,NM_175610	chr15,chr15	+,-	FAM7A3,TJP1	90513,-189699
chr5:140754612-140754882	chr5	+	140754616	140754918	True	NM_018924,NM_032086,NM_018920,NM_032097,NM_018919,NM_005642,NM_032087	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,-,+	PCDHGB3,PCDHGA6,PCDHGA7,PCDHGB3,PCDHGA6,TAF7,PCDHGA7	-4705,-1016,7548,-4705,-1016,-54265,7548
chr17:41992671-41993335	chr17	+	41992740	41993367	True	NR_026770,NM_005374	chr17,chr17	+,-	C17orf88,MPP2	1208,-7627
chr15:101083164-101084209	chr15	+	101083480	101084175	True	NM_024708,NM_178842	chr15,chr15	+,-	ASB7,LASS3	58579,804
chr4:47496245-47497894	chr4	+	47496314	47497288	True	NM_020453,NM_017845	chr4,chr4	+,-	ATP10D,COMMD8	-8955,-30638
chr15:55583143-55583428	chr15	+	55583154	55583390	True	NM_004855,NM_183235	chr15,chr15	+,-	PIGB,RAB27A	27742,-1153
chr4:2627574-2628017	chr4	+	2627760	2627976	True	NM_003704,NM_001161527	chr4,chr4	+,-	FAM193A,TNIP2	-652,129826
chr6:150347469-150347921	chr6	+	150347474	150347880	True	NM_025218,NM_130900	chr6,chr6	+,-	ULBP1,RAET1L	-62384,-806
chr10:18685093-18686202	chr10	+	18685207	18685982	True	NM_201570,NM_182543	chr10,chr10	+,-	CACNB2,NSUN6	3530,254625
chr2:101766683-101767076	chr2	+	101766743	101767070	True	NM_001102426,NM_017546	chr2,chr2	-,+	TBC1D8,C2orf29	826,102274
chrX:9005909-9007599	chrX	+	9005943	9007591	True	NM_001139466,NM_205849	chrX,chrX	+,-	TBL1X,FAM9B	423743,-4827
chr12:107078446-107080111	chr12	+	107078492	107079521	True	NM_001033050,NM_032491	chr12,chr12	-,+	MTERFD3,RFX4	301465,-57
chr3:139109049-139109301	chr3	+	139109135	139109300	True	NM_004766,NR_023350,NM_020191	chr3,chr3,chr3	-,-,+	COPB2,COPB2,MRPS22	-613,-613,-46338
chr15:43621085-43621832	chr15	+	43621227	43621867	True	NM_001159280,NM_014793,NM_001012969	chr15,chr15,chr15	+,-,+	ADAL,LCMT2,ADAL	1004,1003,1004
chrX:18237477-18237880	chrX	+	18237509	18237753	True	NM_153346,NM_001184767,NM_003159	chrX,chrX,chrX	-,-,+	BEND2,BEND2,CDKL5	1321,1321,205971
chrX:18237477-18237880	chrX	+	18239478	18239528	False	NM_153346,NM_001184767,NM_003159	chrX,chrX,chrX	-,-,+	BEND2,BEND2,CDKL5	-454,-454,204196
chr19:16683728-16683977	chr19	+	16683755	16683877	True	NM_024881,NM_032207	chr19,chr19	-,+	SLC35E1,C19orf44	-562,-76601
chr19:50371355-50371807	chr19	+	50371550	50371840	True	NM_032375,NM_024682,NM_007254,NM_001168222,NM_001098633,NM_001098632	chr19,chr19,chr19,chr19,chr19,chr19	-,+,-,+,-,-	AKT1S1,TBC1D17,PNKP,TBC1D17,AKT1S1,AKT1S1	8788,8841,-728,8841,8822,8854
chr16:31158463-31159738	chr16	+	31158530	31159594	True	NM_173502,NM_182958	chr16,chr16	-,+	PRSS36,MYST1	1871,-29596
chr16:57726961-57728171	chr16	+	57726990	57728188	True	NM_001130099,NM_032269	chr16,chr16	-,+	KIFC3,CCDC135	103791,524
chr7:100333659-100333985	chr7	+	100333777	100334033	True	NM_173059,NM_003386,NM_022574	chr7,chr7,chr7	+,+,-	ZAN,ZAN,GIGYF1	-2579,-2579,-46907
chr3:141052025-141053544	chr3	+	141052095	141053439	True	NM_001178140,NM_001080412	chr3,chr3	-,+	TFDP2,ZBTB38	665840,-9091
chr19:7767372-7767900	chr19	+	7767395	7767626	True	NM_001042461,NM_002002	chr19,chr19	+,-	TRAPPC5,FCER2	-21685,-363
chr16:58426363-58426601	chr16	+	58426446	58426628	True	NM_001126130,NM_001126129,NM_022770,NM_001080492	chr16,chr16,chr16,chr16	+,+,+,-	GINS3,GINS3,GINS3,PRSS54	-199,-199,-199,-97495
chr22:48972925-48973189	chr22	+	48972971	48973183	True	NR_033377,NM_015381	chr22,chr22	-,+	FLJ46257,FAM19A5	-945653,-904
chr1:2983080-2983680	chr1	+	2983144	2983720	True	NM_022114,NR_024371,NR_015440,NM_199454	chr1,chr1,chr1,chr1	+,-,-,+	PRDM16,FLJ42875,FLJ42875,PRDM16	2021,619,619,2021
chr3:166579315-166579757	chr3	+	166579496	166579805	True	NM_001122752,NM_001199202	chr3,chr3	+,-	SERPINI1,ZBBX	873626,518316
chr3:54670404-54671136	chr3	+	54670901	54671042	True	NR_027122,NM_018398	chr3,chr3	-,+	ESRG,CACNA2D3	2893,-514261
chr1:160151062-160152619	chr1	+	160151464	160152433	True	NM_001231,NR_028106,NM_001001734	chr1,chr1,chr1	+,-,+	CASQ1,DCAF8,ATP1A4	7851,79895,-4314
chr11:57525246-57525563	chr11	+	57525268	57525371	True	NM_001085468,NM_001085469,NM_001085459,NM_001085458,NM_001085462,NM_001085463,NM_001085460,NM_001085461,NM_001085466,NM_001085467,NM_001085464,NM_001085465,NM_001331,NM_001145101	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,+,+,+,+,+,+,+,+,-	CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,BTBD18	3862,3862,3862,3862,3862,3862,3862,3862,3862,3862,3862,3862,3862,-6015
chr2:55647200-55647981	chr2	+	55647274	55647919	True	NM_080667,NM_001135597,NM_018084	chr2,chr2,chr2	+,-,-	CCDC104,CCDC88A,CCDC88A	98820,-217,-217
chr22:31091279-31091702	chr22	+	31091289	31091651	True	NM_152511,NM_030758	chr22,chr22	-,+	DUSP18,OSBP2	-27417,-547
chrX:69665891-69666265	chrX	+	69665905	69666265	True	NM_020730,NM_016484,NM_021120,NM_001166278	chrX,chrX,chrX,chrX	+,-,+,+	DLG3,PDZD11,DLG3,DLG3	5889,-156107,-1251,8680
chr18:1302597-1303940	chr18	+	1302715	1303970	True	NM_001117,NR_023925	chr18,chr18	+,-	ADCYAP1,C18orf2	-397477,55711
chr17:39676661-39677531	chr17	+	39676734	39677520	True	NM_002276,NM_005801,NM_002275	chr17,chr17,chr17	-,+,-	KRT19,EIF1,KRT15	7171,167606,-1464
chr7:138360258-138360494	chr7	+	138360436	138360516	True	NM_001139456,NM_001085429	chr7,chr7	-,+	SVOPL,TMEM213	3324,122222
chr11:64020174-64020455	chr11	+	64020196	64020278	True	NM_138689,NM_000932,NM_001184883	chr11,chr11,chr11	-,+,+	PPP1R14B,PLCB3,PLCB3	-5783,-1256,-1256
chr13:54890465-54891160	chr13	+	54890703	54890839	True	NR_031628,NM_006418	chr13,chr13	-,+	MIR1297,OLFM4	-4520,-1287878
chr8:146018410-146018985	chr8	+	146018441	146018732	True	NM_000973,NM_033301,NM_030580,NM_213605	chr8,chr8,chr8,chr8	-,-,-,+	RPL8,RPL8,ZNF34,ZNF517	-636,-712,-5716,5528
chr17:76342854-76343928	chr17	+	76342868	76343967	True	NM_003955,NM_024419	chr17,chr17	-,+	SOCS3,PGS1	12241,30767
chr2:85818191-85818599	chr2	+	85818203	85818643	True	NM_016494,NM_001031738,NM_006634	chr2,chr2,chr2	+,-,+	RNF181,TMEM150A,VAMP5	4193,11229,-6723
chr14:70654896-70655167	chr14	+	70654913	70654980	True	NM_058240,NM_182932,NM_033262,NM_003813,NM_183002	chr14,chr14,chr14,chr14,chr14	-,-,-,+,-	SLC8A3,SLC8A3,SLC8A3,ADAM21,SLC8A3	864,864,864,269236,864
chr1:19936856-19937536	chr1	+	19937025	19937402	True	NM_004930,NM_001204089	chr1,chr1	-,+	CAPZB,C1orf15-NBL1	-124959,-13609
chr16:74454355-74454769	chr16	+	74454372	74454602	True	NM_001011880,NM_002811	chr16,chr16	-,+	CLEC18B,PSMD7	816,-123750
chr16:74454355-74454769	chr16	-	69985825	69986055	False	NM_001136214,NR_003610,NM_182619	chr16,chr16,chr16	+,-,+	CLEC18A,PDXDC2P,CLEC18A	-1250,113846,-1066
chr16:74454355-74454769	chr16	-	70208737	70208967	False	NR_033959,NM_173619	chr16,chr16	-,+	LOC729513,CLEC18C	51019,-860
chr12:53836187-53836413	chr12	+	53836329	53836455	True	NM_001128911,NM_001128912,NM_001128913,NM_001128914,NM_031989,NM_005016,NM_001005354,NM_001193511,NM_018457,NM_001098620	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,+,+,+,+,+,-,+,+	PCBP2,PCBP2,PCBP2,PCBP2,PCBP2,PCBP2,PRR13,MAP3K12,PRR13,PCBP2	9430,9430,9430,9430,9430,9430,-948,57039,-948,9430
chr17:47862596-47864061	chr17	+	47862948	47863857	True	NM_007067,NM_001199155,NM_001199156,NM_001199157,NM_001199158,NM_030802	chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,-	MYST2,MYST2,MYST2,MYST2,MYST2,FAM117A	2123,2123,2123,2123,2123,-21430
chr20:42297597-42298598	chr20	+	42298174	42298435	True	NM_001008901,NM_002466	chr20,chr20	-,+	GTSF1L,MYBL2	57264,-2516
chr12:10363904-10364642	chr12	+	10364180	10364506	True	NM_031412,NM_002543	chr12,chr12	+,-	GABARAPL1,OLR1	982,-39390
chr16:791363-791730	chr16	+	791377	791585	True	NM_032304,NM_022493	chr16,chr16	+,-	HAGHL,NARFL	-14162,-380
chr1:200842358-200842673	chr1	+	200842373	200842621	True	NM_005298,NM_017596	chr1,chr1	+,-	GPR25,KIF21B	-258,150257
chr9:139736722-139736956	chr9	+	139736899	139736961	True	NM_003792,NM_206920,NM_014172,NM_001080482,NM_001135861	chr9,chr9,chr9,chr9,chr9	-,+,+,+,+	EDF1,MAMDC4,PHPT1,C9orf172,PHPT1	23827,9857,6294,1905,6294
chr1:6546329-6546539	chr1	+	6546488	6546584	True	NM_001042665,NM_001042664,NM_020631,NM_031475	chr1,chr1,chr1,chr1	-,-,-,+	PLEKHG5,PLEKHG5,PLEKHG5,ESPN	-474,4106,5226,-61691
chr16:78130291-78132159	chr16	+	78130504	78132197	True	NM_199355,NM_016373,NM_130791,NM_130844	chr16,chr16,chr16,chr16	-,+,+,+	ADAMTS18,WWOX,WWOX,WWOX	-661493,1353,1353,1353
chr1:22109634-22109914	chr1	+	22109773	22109963	True	NM_001032730,NM_001013693,NM_032236	chr1,chr1,chr1	-,+,-	USP48,LDLRAD2,USP48	-85,28794,-85
chr4:176987238-176987575	chr4	+	176987250	176987574	True	NM_170710,NM_201592,NM_181265	chr4,chr4,chr4	+,-,+	WDR17,GPM6A,WDR17	-316,-63602,-316
chr17:74306236-74307493	chr17	+	74306882	74307536	True	NM_032134,NM_182565	chr17,chr17	-,+	QRICH2,FAM100B	-3121,-45648
chr6:116860051-116860993	chr6	+	116860173	116860937	True	NM_001139444,NM_153036	chr6,chr6	-,+	BET3L,FAM26D	5889,-10036
chr5:52776831-52777849	chr5	+	52776865	52777700	True	NM_013409,NM_006350,NM_176806	chr5,chr5,chr5	+,+,-	FST,FST,MOCS2	-322,-322,-371267
chr5:61710658-61711081	chr5	+	61710743	61710995	True	NM_014473,NM_016338,NM_001134779	chr5,chr5,chr5	-,+,+	DIMT1L,IPO11,IPO11	-11015,-2228,3715
chr5:16181949-16182184	chr5	+	16181965	16182143	True	NM_012304,NM_001102562	chr5,chr5	+,-	FBXL7,MARCH11	-681711,-2068
chr7:2594441-2594723	chr7	+	2594498	2594722	True	NM_001100390,NM_152558,NM_152743	chr7,chr7,chr7	+,+,-	IQCE,IQCE,BRAT1	3909,3909,720
chr12:71551028-71552455	chr12	+	71551047	71552445	True	NM_003667,NM_004616	chr12,chr12	+,-	LGR5,TSPAN8	281367,71
chr12:95048104-95050017	chr12	+	95048547	95049765	True	NM_020698,NR_030171	chr12,chr12	-,+	TMCC3,MIR492	-4223,178408
chr15:23127915-23129536	chr15	+	23128075	23128640	True	NM_001142275,NR_024074	chr15,chr15	-,+	NIPA1,GOLGA8IP	-41232,126601
chr15:23127915-23129536	chr15	-	29064064	29064402	False	NR_033351,NR_037599	chr15,chr15	-,+	GOLGA8F,LOC646278	-285921,-29135
chr19:4722205-4722609	chr19	+	4722390	4722616	True	NR_027148,NM_139159	chr19,chr19	+,-	C19orf30,DPP9	46500,1289
chr1:1114345-1114577	chr1	+	1114397	1114579	True	NM_004195,NM_153254,NM_001130045	chr1,chr1,chr1	-,+,+	TNFRSF18,TTLL10,TTLL10	27560,497,-5162
chr17:43973901-43974388	chr17_ctg5_hap1	-	893287	893338	True	NM_016835,NM_016834,NM_005910,NR_024559,NM_001123067,NM_001123066,NM_016841,NR_024560,NM_001203251,NM_001203252	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	-,-,-,+,-,-,-,-,-,-	MAPT,MAPT,MAPT,LOC100128977,MAPT,MAPT,MAPT,LOC100130148,MAPT,MAPT	2543,2543,2543,1355,2543,2543,2543,1137,2543,2543
chr11:61007435-61007701	chr11	+	61007436	61007650	True	NM_014224,NM_152718	chr11,chr11	+,-	PGA5,VWCE	993,55188
chr11:61007435-61007701	chr11	+	60969865	60969915	False	NM_001079807,NM_017966	chr11,chr11	+,-	PGA3,VPS37C	1068,-40949
chr11:61007435-61007701	chr11	+	60988610	60988824	False	NM_017966,NM_001079808	chr11,chr11	-,+	VPS37C,PGA4	-59694,996
chr3:9439641-9440671	chr3	+	9439651	9440565	True	NR_027007,NM_001080517	chr3,chr3	-,+	LOC440944,SETD5	-477,-299
chr4:89680528-89681475	chr4	+	89680616	89681474	True	NR_002806,NM_153757	chr4,chr4	+,-	FAM13AOS,NAP1L5	-49735,-61593
chr14:77290137-77290675	chr14	+	77290571	77290659	True	NM_015305,NM_194287	chr14,chr14	-,+	ANGEL1,C14orf166B	-11288,2065
chr10:111683380-111683584	chr10	+	111683474	111683614	True	NM_020383,NM_019903,NR_030724,NM_001167604	chr10,chr10,chr10,chr10	-,+,-,-	XPNPEP1,ADD3,XPNPEP1,XPNPEP1	-163,82111,-163,-163
chr6:3257679-3259056	chr6	+	3257697	3258844	True	NM_178012,NM_001135750,NM_001128591,NM_001128592	chr6,chr6,chr6,chr6	-,+,+,+	TUBB2B,PSMG4,PSMG4,PSMG4	-29729,317,317,317
chr12:57998084-57998302	chr12	+	57998115	57998183	True	NM_001111270,NM_182947,NM_178502,NM_001478	chr12,chr12,chr12,chr12	+,+,+,-	ARHGEF25,ARHGEF25,DTX3,B4GALNT1	5779,7034,420,28852
chr2:204824397-204825202	chr2	+	204824400	204825218	True	NM_203365,NM_012092	chr2,chr2	-,+	RAPH1,ICOS	-424342,-22980
chr4:39103351-39105300	chr4	+	39103817	39105166	True	NM_199039,NM_024943	chr4,chr4	+,-	KLHL5,TMEM156	-40023,-69776
chr17:79372594-79373089	chr17	+	79372761	79372997	True	NM_001080519,NR_036152	chr17,chr17	+,-	BAHCC1,MIR3186	542,45267
chr11:55888485-55889736	chr11	+	55888484	55889340	True	NM_001004064,NM_001005201	chr11,chr11	-,+	OR8J3,OR8H3	15914,508
chr7:24612374-24612647	chr7	+	24612395	24612641	True	NM_016447,NM_001127453	chr7,chr7	+,-	MPP6,DFNA5	443,184492
chr5:81572722-81573859	chr5	+	81573182	81573870	True	NM_001017971,NM_001025	chr5,chr5	+,-	ATP6AP1L,RPS23	27295,415
chr7:5463748-5463970	chr7	+	5463845	5463949	True	NM_001080495,NM_153247	chr7,chr7	-,+	TNRC18,SLC29A4	-668,-141335
chr11:74441959-74442259	chr11	+	74441959	74442219	True	NM_015424,NM_001098638	chr11,chr11	-,+	CHRDL2,RNF169	17,17693
chr8:124212529-124213630	chr8	+	124212623	124213675	True	NR_024479,NM_207006	chr8,chr8	-,+	LOC100131726,FAM83A	1358,-17923
chr3:50543547-50544011	chr3	+	50543570	50543944	True	NM_006030,NM_016173,NM_001005505,NM_001174051	chr3,chr3,chr3,chr3	-,+,-,-	CACNA2D2,HEMK1,CACNA2D2,CACNA2D2	-2678,62964,-2678,-2678
chr5:49737605-49737863	chr5	+	49737691	49737842	True	NM_198449,NM_001178055	chr5,chr5	-,+	EMB,PARP8	-457,223890
chr8:99310361-99310912	chr8	+	99310406	99310850	True	NM_024759,NM_020697	chr8,chr8	-,+	NIPAL2,KCNS2	-3785,128399
chr21:45705388-45705599	chr21	+	45705473	45705549	True	NM_175867,NM_000658,NM_000383	chr21,chr21,chr21	-,+,+	DNMT3L,AIRE,AIRE	-23374,4724,213
chr11:71638278-71639077	chr11	+	71638678	71639099	True	NR_024147,NR_029192,NR_024148,NM_018320	chr11,chr11,chr11,chr11	+,-,+,+	RNF121,LOC100133315,RNF121,RNF121	668,444,668,668
chr7:130363832-130364438	chr7	+	130363907	130364291	True	NR_029899,NM_052933	chr7,chr7	+,-	MIR335,TSGA13	-228013,7165
chrX:37903250-37904779	chrX	+	37903470	37904797	True	NM_001163334,NM_001170750	chrX,chrX	+,-	SYTL5,SRPX	-10745,175437
chr2:128612889-128614464	chr2	+	128613038	128613582	True	NM_032740,NM_004805	chr2,chr2	+,-	SFT2D3,POLR2D	-154494,2197
chr9:91921422-91922221	chr9	+	91921567	91922059	True	NM_016848,NM_001827,NR_036108	chr9,chr9,chr9	-,+,+	SHC3,CKS2,MIR3153	-127885,4053,5080
chr11:7947939-7949404	chr11	+	7947981	7949446	True	NM_003754,NM_001004461	chr11,chr11	+,-	EIF3F,OR10A6	59420,814
chr17:26552885-26554045	chr17	+	26552904	26554083	True	NR_003064,NR_028334	chr17,chr17	+,-	PYY2,FLJ40504	-118,80375
chr14:96506625-96507028	chr14	+	96506691	96506985	True	NM_018036,NR_023938	chr14,chr14	-,+	ATG2B,C14orf132	322743,-1080
chr1:20467398-20468121	chr1	+	20467529	20468063	True	NM_022819,NM_012400	chr1,chr1	+,-	PLA2G2F,PLA2G2D	-1757,-21521
chr13:22244343-22244588	chr13	+	22244361	22244497	True	NM_152726,NM_002010	chr13,chr13	-,+	EFHA1,FGF9	-66006,717
chr10:125649972-125650283	chr10	+	125649993	125650263	True	NM_198148,NM_153442	chr10,chr10	-,+	CPXM2,GPR26	1287,-224173
chr17:30348369-30348581	chr17	+	30348395	30348597	True	NM_018428,NM_052888	chr17,chr17	-,+	UTP6,LRRC37B	-119666,-291
chr18:47814690-47815215	chr18	+	47814705	47815043	True	NM_001204137,NM_001204138,NM_001204139,NM_015844,NM_015847,NM_015846,NM_001204140,NM_001204141,NM_001101654,NM_001204136,NM_001204151,NM_001039535,NM_001204143,NM_015845,NM_002384,NM_001204142,NM_014593	chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18,chr18	-,-,-,-,-,-,-,-,-,-,-,+,-,-,-,-,-	MBD1,MBD1,MBD1,MBD1,MBD1,MBD1,MBD1,MBD1,CXXC1,MBD1,MBD1,SKA1,MBD1,MBD1,MBD1,MBD1,CXXC1	-6561,-6561,-6561,-6561,-6561,-6561,-6561,-6561,-13,-6561,-8318,86348,-6568,-6561,-6561,-6561,-13
chr1:6557849-6558065	chr1	+	6557864	6558020	True	NM_001042664,NM_020631,NM_138697,NM_001042663	chr1,chr1,chr1,chr1	-,-,+,-	PLEKHG5,PLEKHG5,TAS1R1,PLEKHG5	-7224,-6104,57317,-380
chr5:63459589-63461303	chr5	+	63459693	63461241	True	NM_000524,NM_178532,NM_001113561	chr5,chr5,chr5	-,+,+	HTR1A,RNF180,RNF180	-202147,429,429
chr5:131405188-131405548	chr5	+	131405203	131405585	True	NM_001205250,NM_000588,NM_000758	chr5,chr5,chr5	-,+,+	ACSL6,IL3,CSF2	-57442,-8907,3899
chr3:124654055-124655790	chr3	+	124654134	124655529	True	NM_033049,NR_033437	chr3,chr3	-,+	MUC13,UMPS	-539,-204982
chrY:2711627-2712569	chrY	+	2711755	2712283	True	NM_003140,NM_001008	chrY,chrY	-,+	SRY,RPS4Y1	-55963,-2190
chr17:65712588-65712956	chr17	+	65712681	65712915	True	NM_015462,NM_181655	chr17,chr17	+,-	NOL11,C17orf58	1145,276910
chr5:65891186-65891979	chr5	+	65891210	65891842	True	NM_001164664,NM_198828,NM_005582	chr5,chr5,chr5	+,+,-	MAST4,MAST4,CD180	333,333,600825
chr2:74213838-74214639	chr2	+	74213949	74214630	True	NM_144993,NM_001035505	chr2,chr2	+,-	TET3,BOLA3	58819,160459
chr9:125275908-125277754	chr9	+	125276082	125277778	True	NM_012363,NM_054107,NM_001004452	chr9,chr9,chr9	-,+,+	OR1N1,OR1J2,OR1J4	11844,-3052,3641
chr1:10489205-10490351	chr1	+	10489508	10490240	True	NM_198544,NM_004401,NR_036462,NM_199294,NM_199006,NR_037187,NR_037186	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,-,+,+,+,+,+	APITD1-CORT,DFFA,APITD1,APITD1,APITD1-CORT,APITD1-CORT,APITD1-CORT	-3,42423,563,-3,-3,563,563
chr17:11143088-11143507	chr17	+	11143166	11143476	True	NM_001101387,NM_001173461,NM_001173462,NM_207386	chr17,chr17,chr17,chr17	-,+,+,+	PIRT,SHISA6,SHISA6,SHISA6	-401748,1263,1263,1263
chr16:58768409-58768758	chr16	+	58768453	58768581	True	NM_002080,NM_024860	chr16,chr16	-,+	GOT2,SETD6	-207,-219128
chr11:10669793-10670508	chr11	+	10669917	10670471	True	NM_014633,NM_001098579	chr11,chr11	+,-	CTR9,MRVI1	102339,3427
chr3:138723615-138724226	chr3	+	138723710	138724216	True	NM_001040061,NM_001134659	chr3,chr3	+,-	C3orf72,PRR23A	-57691,944
chr20:11887205-11887722	chr20	+	11887205	11887761	True	NM_000214,NM_014962	chr20,chr20	-,+	JAG1,BTBD3	-1232511,10803
chr10:17176528-17177539	chr10	+	17176629	17177393	True	NM_001081,NM_003380	chr10,chr10	-,+	CUBN,VIM	-4813,92864
chr3:149094814-149096670	chr3	+	149094822	149096588	True	NM_004617,NM_014220	chr3,chr3	+,-	TM4SF4,TM4SF1	95779,132
chr1:87378838-87379751	chr1	+	87378874	87379742	True	NM_203341,NM_001134492,NM_004261,NM_012262	chr1,chr1,chr1,chr1	-,+,-,+	SEP15,HS2ST1,SEP15,HS2ST1	415,592,415,592
chr3:63850312-63850749	chr3	+	63850313	63850780	True	NM_000333,NM_025075	chr3,chr3	+,-	ATXN7,THOC7	-131,-716
chr17:59940454-59940800	chr17	+	59940458	59940748	True	NM_032043,NM_018488	chr17,chr17	-,+	BRIP1,TBX4	222,-406702
chr3:150804200-150804462	chr3	+	150804214	150804454	True	NM_053002,NM_174878	chr3,chr3	+,-	MED12L,CLRN1	221,-113428
chr7:134896661-134897046	chr7	+	134896710	134897016	True	NM_014149,NM_182489	chr7,chr7	-,+	WDR91,STRA8	-394,19714
chr16:53077975-53078276	chr16	+	53078008	53078218	True	NR_033920,NM_025134	chr16,chr16	-,+	LOC643714,CHD9	-437121,10726
chr5:137871264-137872191	chr5	+	137871748	137872151	True	NM_004730,NM_001964	chr5,chr5	-,+	ETF1,EGR1	6832,-70625
chr17:38658874-38659167	chr17	+	38658913	38659019	True	NM_032865,NM_001552	chr17,chr17	-,+	TNS4,IGFBP4	-1059,-59288
chr2:179188347-179188680	chr2	+	179188523	179188717	True	NM_001139518,NM_145739	chr2,chr2	-,+	PRKRA,OSBPL6	126688,-3616
chr1:223900893-223901196	chr1	+	223900959	223901223	True	NM_001143962,NM_001748	chr1,chr1	-,+	CAPN8,CAPN2	-47523,-891
chr17:66587533-66587796	chr17	+	66587549	66587751	True	NM_212472,NM_017565	chr17,chr17	+,-	PRKAR1A,FAM20A	-79057,9394
chr1:43129158-43130476	chr1	+	43129546	43130486	True	NM_006347,NM_001123395	chr1,chr1	+,-	PPIH,CLDN19	-5550,75489
chr15:54056141-54057645	chr15	+	54056188	54057630	True	NM_182758,NM_001080534	chr15,chr15	-,+	WDR72,UNC13C	-4329,247470
chr14:23791162-23791532	chr14	+	23791191	23791551	True	NR_026862,NM_004643	chr14,chr14	-,+	PPP1R3E,PABPN1	-19134,-1845
chr19:38748270-38749627	chr19	+	38748801	38748997	True	NM_021102,NM_001166103,NM_033256	chr19,chr19,chr19	+,+,-	SPINT2,SPINT2,PPP1R14A	6100,6100,-1629
chr6:110299166-110299418	chr6	+	110299206	110299446	True	NM_001024934,NM_005284	chr6,chr6	-,+	WASF1,GPR6	201811,851
chr11:46725576-46726045	chr11	+	46725633	46726007	True	NM_004308,NM_001184751,NM_024741	chr11,chr11,chr11	-,+,+	ARHGAP1,ZNF408,ZNF408	-3513,-3040,-3367
chr7:99477258-99477521	chr7	+	99477399	99477523	True	NM_001005276,NM_057096	chr7,chr7	-,+	OR2AE1,CYP3A43	-2743,-51823
chr4:68426525-68427511	chr4	+	68426646	68427455	True	NM_012108,NM_001812	chr4,chr4	+,-	STAP1,CENPC1	-2251,-15390
chr2:187587385-187588904	chr2	+	187587462	187588872	True	NM_182521,NM_177454	chr2,chr2	-,+	ZSWIM2,FAM171B	125075,-28724
chr3:185828096-185828843	chr3	+	185828296	185828655	True	NR_033752,NM_004454	chr3,chr3	+,-	LOC344887,ETV5	-142081,-1395
chrX:51812685-51813068	chrX	+	51812697	51813091	True	NM_001098800,NM_177537,NM_177535,NR_003712,NM_030801,NR_003711	chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,+,-,-	MAGED4,MAGED4B,MAGED4B,SNORA11E,MAGED4B,SNORA11D	-418,-329,-329,-6313,-329,-6128
chrX:51812685-51813068	chrX	-	51927195	51927589	False	NM_001098800,NM_177537,NM_177535,NR_003712,NM_030801,NR_003711	chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,-,+,+	MAGED4,MAGED4B,MAGED4B,SNORA11E,MAGED4B,SNORA11D	418,329,329,6313,329,6128
chrX:153411078-153411283	chrX	+	153411082	153411322	True	NM_020061,NM_001110792	chrX,chrX	+,-	OPN1LW,MECP2	-1408,-47894
chrX:153411078-153411283	chrX	+	153449492	153449733	False	NM_001586,NM_000513,NM_001048181	chrX,chrX,chrX	-,+,+	TEX28,OPN1MW,OPN1MW2	73771,-1458,-1458
chrX:153411078-153411283	chrX	+	153486610	153486851	False	NM_001586,NM_000513,NM_001048181	chrX,chrX,chrX	-,+,+	TEX28,OPN1MW,OPN1MW2	36653,-1458,-1458
chr19:56687476-56687676	chr19	+	56687475	56687549	True	NM_001145546,NM_001080456,NM_033106	chr19,chr19,chr19	+,-,+	GALP,ZSCAN5B,GALP	-137,16922,-137
chr3:18464557-18464993	chr3	+	18464563	18465012	True	NM_002971,NM_144633,NM_001195470	chr3,chr3,chr3	-,+,-	SATB1,KCNH8,SATB1	1867,725004,1867
chr11:65665670-65666236	chr11	+	65665924	65666123	True	NM_198897,NM_004214,NM_005438,NM_006848	chr11,chr11,chr11,chr11	-,-,-,+	FIBP,FIBP,FOSL1,CCDC85B	-9914,-9914,1933,-8100
chr7:74990819-74991288	chr7	+	74991004	74991309	True	NR_003614,NM_001002840,NM_018991	chr7,chr7,chr7	-,+,+	PMS2L2,STAG3L1,STAG3L1	-2789,-2611,-2611
chr7:74990819-74991288	chr7	-	72473592	72473897	False	NM_001013739,NR_003614	chr7,chr7	-,+	STAG3L3,PMS2L2	2611,2782
chr7:74990819-74991288	chr7	-	74303852	74304157	False	NR_027777,NR_027776,NM_001025202,NR_027775	chr7,chr7,chr7,chr7	+,+,-,+	PMS2P5,PMS2P5,STAG3L2,PMS2P5	2736,2736,2627,2736
chr14:20147051-20147315	chr14	+	20147175	20147353	True	NM_001197287,NM_172194	chr14,chr14	-,+	OR11H2,OR4Q3	35188,68233
chr19:2426432-2426838	chr19	+	2426535	2426857	True	NM_182973,NM_012458	chr19,chr19	+,-	TMPRSS9,TIMM13	-36802,1068
chr16:21718343-21718766	chr16	+	21718482	21718718	True	NM_170664,NM_005849	chr16,chr16	+,-	OTOA,IGSF6	-2256,-54510
chr6:34101493-34101881	chr6	+	34101560	34101855	True	NM_002131,NM_000841	chr6,chr6	+,-	HMGA1,GRM4	102721,-117
chr11:67350580-67350942	chr11	+	67350864	67350972	True	NM_000852,NR_033791	chr11,chr11	+,-	GSTP1,DOC2GP	93,32213
chr11:913627-914303	chr11	+	914217	914279	True	NM_012305,NM_001142675,NM_001142674,NM_001142677,NM_001142676,NM_023947	chr11,chr11,chr11,chr11,chr11,chr11	+,-,-,-,-,-	AP2A2,CHID1,CHID1,CHID1,CHID1,CHID1	11561,829,-3343,-3343,-3343,-3343
chr9:65625707-65627545	chr9	+	65626047	65627528	True	NR_024496,NM_015667	chr9,chr9	+,-	LOC442421,FAM75A7	866740,-116437
chr9:65625707-65627545	chr9	+	43885595	43885645	False	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	-254865,-200761
chr9:65625707-65627545	chr9	+	40301764	40302094	False	NM_001083124,NM_033160	chr9,chr9	+,-	FAM75A3,ZNF658	398196,490068
chr20:2638174-2638853	chr20	+	2638219	2638805	True	NR_004399,NR_002981,NR_002738,NR_003078,NM_006899,NR_027700,NM_006392,NR_031699,NR_002739,NM_174855,NM_174856	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,+,+,+,-,+,+,+,+,-,-	SNORD86,SNORA51,SNORD57,SNORD110,IDH3B,NOP56,NOP56,MIR1292,SNORD56,IDH3B,IDH3B	-1529,-2559,-687,-3414,6088,-5018,-5018,-4849,-1002,6088,6088
chr6:111768474-111769683	chr6	+	111768473	111769382	True	NM_002912,NR_034111	chr6,chr6	-,+	REV3L,LOC643749	35084,35292
chr3:183355861-183356843	chr3	+	183355871	183356713	True	NM_130446,NM_017644	chr3,chr3	-,+	KLHL6,KLHL24	-82372,-2513
chr17:79886385-79887608	chr17	+	79886598	79887630	True	NM_002359,NM_006907,NM_032711,NM_153824,NR_015454	chr17,chr17,chr17,chr17,chr17	-,-,-,-,+	MAFG,PYCR1,MAFG,PYCR1,LOC92659	-1010,7388,-5190,7388,-944
chr22:50911179-50911385	chr22	+	50911193	50911399	True	NM_024866,NM_002972	chr22,chr22	+,-	ADM2,SBF1	8612,2115
chr6:43486710-43488250	chr6	+	43486815	43488113	True	NM_004875,NM_001012974,NM_203290,NM_015388	chr6,chr6,chr6,chr6	+,-,+,-	POLR1C,C6orf154,POLR1C,YIPF3	-2083,-8391,-2097,-2087
chr16:641376-641750	chr16	+	641433	641565	True	NM_001172665,NM_001172664,NM_001172666,NM_001040160,NM_001172663,NM_021168	chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,-,+,+	RAB40C,RAB40C,RAB40C,C16orf13,RAB40C,RAB40C	-1407,-1815,-1407,44840,-2127,-1311
chr16:66641907-66642597	chr16	+	66642150	66642520	True	NM_181553,NM_144601,NR_037619,NM_004614,NR_037613	chr16,chr16,chr16,chr16,chr16	+,+,+,-,+	CMTM3,CMTM3,CMTM3,TK2,CMTM3	-3634,-3973,-3567,-57835,-4266
chr22:21357086-21357830	chr22	+	21357085	21357558	True	NR_027051,NM_030573,NR_027052,NM_001008695	chr22,chr22,chr22,chr22	+,-,+,-	FLJ39582,THAP7,FLJ39582,THAP7	-928,-681,-928,-681
chr7:150975584-150976846	chr7	+	150975711	150976827	True	NM_001003802,NR_030407,NM_003078	chr7,chr7,chr7	-,+,-	SMARCD3,MIR671,SMARCD3	-1891,-40255,-1480
chr19:18724616-18724837	chr19	+	18724688	18724822	True	NM_012109,NM_004750	chr19,chr19	+,-	TMEM59L,CRLF1	-1057,-7028
chr11:9683596-9684432	chr11	+	9683705	9684481	True	NR_033972,NM_015055	chr11,chr11	-,+	LOC440028,SWAP70	96656,1146
chr19:697177-697471	chr19	+	697275	697515	True	NM_214710,NM_001040134	chr19,chr19	-,+	PRSS57,PALM	-1814,11437
chr12:98911445-98911660	chr12	+	98911492	98911668	True	NM_001032284,NM_001032283,NR_027157,NM_003276	chr12,chr12,chr12,chr12	+,+,-,+	TMPO,TMPO,LOC100128191,TMPO	-2196,-2196,-1488,-2196
chr6:167041607-167042058	chr6	+	167041808	167042072	True	NM_021135,NM_007045	chr6,chr6	-,+	RPS6KA2,FGFR1OP	-1082,370743
chr19:4006648-4007173	chr19	+	4006956	4007086	True	NM_015897,NM_001961	chr19,chr19	+,-	PIAS4,EEF2	662,-21495
chr13:49955435-49956716	chr13	+	49955435	49956764	True	NM_031915,NM_030925	chr13,chr13	+,-	SETDB2,CAB39L	61664,19021
chr11:34536147-34536520	chr11	+	34536169	34536573	True	NM_001422,NM_001752,NM_198381	chr11,chr11,chr11	-,+,-	ELF5,CAT,ELF5	-839,-75755,-2823
chr7:107537438-107538114	chr7	+	107537709	107538009	True	NM_000111,NM_000108	chr7,chr7	-,+	SLC26A3,DLD	-94031,-6181
chr5:5140857-5141925	chr5	+	5140903	5141963	True	NM_139056,NR_028351	chr5,chr5	+,-	ADAMTS16,FLJ33360	-511,1195494
chr15:89011161-89011960	chr15	+	89011170	89011962	True	NM_022163,NM_022839,NM_176805	chr15,chr15,chr15	-,+,+	MRPL46,MRPS11,MRPS11	-537,-537,-537
chr19:36507602-36507846	chr19	+	36507644	36507892	True	NM_198867,NM_032878,NM_001039876,NM_001042631	chr19,chr19,chr19,chr19	-,-,-,+	ALKBH6,ALKBH6,C19orf46,SDHAF1	-2503,-2503,-7972,-21606
chr9:37754030-37754404	chr9	+	37754057	37754453	True	NM_016042,NM_144964	chr9,chr9	-,+	EXOSC3,RG9MTD3	30662,-306
chr8:146277459-146277858	chr8	+	146277462	146277902	True	NR_023392	chr8	-	ZNF252	-49177
chr11:69457263-69457513	chr11	+	69457366	69457428	True	NM_153451,NM_053056	chr11,chr11	-,+	ORAOV1,CCND1	32787,-1544
chr6:137105379-137106604	chr6	+	137105730	137106582	True	NM_000288,NM_005923	chr6,chr6	+,-	PEX7,MAP3K5	37119,7124
chr19:41857450-41857899	chr19	+	41857591	41857899	True	NM_001098825,NM_000660	chr19,chr19	+,-	TMEM91,TGFB1	11971,1982
chr2:179655490-179655835	chr2	+	179655503	179655849	True	NM_019091,NM_003319	chr2,chr2	+,-	PLEKHA3,TTN	-310355,16351
chr21:38377701-38377913	chr21	+	38377833	38377955	True	NM_000411,NM_018962	chr21,chr21	-,+	HLCS,DSCR6	-15297,907
chr15:78442294-78443586	chr15	+	78442381	78443627	True	NM_006383,NM_005530	chr15,chr15	-,+	CIB2,IDH3A	-18503,-713
chr8:139925850-139926304	chr8	+	139926000	139926202	True	NM_017444,NM_152888	chr8,chr8	+,-	CHRAC1,COL22A1	1595198,84
chr4:48987789-48987997	chr4	+	48987792	48988026	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	238,-78977
chr1:12289008-12289613	chr1	+	12289145	12289570	True	NM_138346,NM_018156,NM_015378	chr1,chr1,chr1	-,+,+	KIAA2013,VPS13D,VPS13D	-302660,542,542
chr11:60623565-60624974	chr11	+	60623695	60624836	True	NM_004778,NM_207341	chr11,chr11	-,+	GPR44,ZP1	-251,10178
chr20:44421479-44421921	chr20	+	44421504	44421871	True	NM_080614,NM_052951	chr20,chr20	-,+	WFDC3,DNTTIP1	-957,-980
chr8:145632925-145633436	chr8	+	145633221	145633435	True	NR_031600,NM_130849,NM_017767,NM_174922,NM_013291	chr8,chr8,chr8,chr8,chr8	-,-,-,+,-	MIR1234,SLC39A4,SLC39A4,ADCK5,CPSF1	-7662,8888,8532,-35541,1348
chr11:19149623-19151359	chr11	+	19150274	19150932	True	NM_054030,NM_019028	chr11,chr11	-,+	MRGPRX2,ZDHHC13	-68046,-11638
chr6:76310439-76311431	chr6	+	76310462	76311419	True	NM_015687,NM_015571,NM_001100409	chr6,chr6,chr6	-,+,+	FILIP1,SENP6,SENP6	-106966,202,202
chr6:10882367-10882800	chr6	+	10882384	10882506	True	NM_004752,NM_001040274	chr6,chr6	-,+	GCM2,SYCP2L	-286,4557
chr14:102274739-102276031	chr14	+	102274871	102276056	True	NM_002719,NM_178587,NM_178586,NR_031649	chr14,chr14,chr14,chr14	+,+,+,-	PPP2R5C,PPP2R5C,PPP2R5C,MIR1247	83,83,83,-248112
chr17:18427639-18428376	chr17	+	18427759	18428207	True	NR_026809,NR_003554,NM_001040078	chr17,chr17,chr17	-,-,+	FAM106A,LOC220594,LGALS9C	2004,-3193,-47716
chr17:18427639-18428376	chr17	-	58252624	58253151	False	NM_000717,NR_002999	chr17,chr17	+,-	CA4,SCARNA20	-25373,55912
chr17:18427639-18428376	chr17	-	20322674	20322745	False	NR_023380,NM_001042685	chr17,chr17	+,-	CCDC144C,LGALS9B	-98239,48153
chr17:18427639-18428376	chr17	-	16694146	16694573	False	NR_026810,NR_029392,NR_003190	chr17,chr17,chr17	+,-,+	FAM106C,KRT16P2,LOC162632	-2140,41629,-3991
chr12:109458752-109459022	chr12	+	109458967	109459071	True	NM_032663,NM_018711	chr12,chr12	+,-	USP30,SVOP	31308,-122
chr11:50148722-50149078	chr11	+	50148794	50149116	True	NR_003034,NM_001001955	chr11,chr11	-,+	LOC441601,OR4C13	108567,-174909
chr1:116519534-116519802	chr1	+	116519610	116519790	True	NM_018420,NM_005599	chr1,chr1	+,-	SLC22A15,NHLH2	-542,-135863
chr1:14032331-14032917	chr1	+	14032495	14032955	True	NM_015866,NM_001135610,NM_012231,NM_001010847	chr1,chr1,chr1,chr1	+,+,+,-	PRDM2,PRDM2,PRDM2,LRRC38	-1202,-5817,-1202,-192253
chr7:140860137-140860948	chr7	+	140860284	140860610	True	NM_053035,NM_001195278	chr7,chr7	-,+	MRPS33,LOC100131199	-145503,-86303
chr22:44208648-44209285	chr22	+	44208697	44209323	True	NM_025225,NM_198856,NM_022785	chr22,chr22,chr22	+,-,-	PNPLA3,EFCAB6,EFCAB6	110295,-480,-480
chr8:26723971-26724325	chr8	+	26724019	26724308	True	NM_033302,NM_033303,NM_000680,NM_033304,NM_001386	chr8,chr8,chr8,chr8,chr8	-,-,-,-,+	ADRA1A,ADRA1A,ADRA1A,ADRA1A,DPYSL2	-1097,-1097,-1097,-1097,-288649
chr12:123233696-123234895	chr12	+	123233982	123234766	True	NM_032554,NM_003677	chr12,chr12	-,+	GPR81,DENR	-18853,2604
chr17:55979254-55979820	chr17	+	55979686	55979862	True	NM_080677,NM_017949	chr17,chr17	+,-	DYNLL2,CUEDC1	180917,938
chr6:36373246-36374510	chr6	+	36373486	36374178	True	NM_016135,NM_173562	chr6,chr6	-,+	ETV7,KCTD20	-18019,36365
chr9:4300116-4300419	chr9	+	4300143	4300471	True	NM_001042413,NM_004170	chr9,chr9	-,+	GLIS3,SLC1A1	-108,189955
chr6:40346327-40346601	chr6	+	40346400	40346578	True	NR_024015,NM_020737	chr6,chr6	+,-	TDRG1,LRFN2	-288,208598
chr9:132933781-132934075	chr9	+	132933821	132933975	True	NM_014286,NM_015033	chr9,chr9	+,-	NCS1,FNBP1	881,-128348
chrX:134186231-134187184	chrX	+	134186298	134186917	True	NM_001078171,NM_001078172,NM_001134321	chrX,chrX,chrX	+,-,-	FAM127A,FAM127B,FAM127B	-20016,-77,-77
chr4:21285556-21286492	chr4	+	21285944	21286460	True	NM_145048,NM_147183	chr4,chr4	+,-	PACRGL,KCNIP4	-583959,19119
chr19:49404251-49405213	chr19	+	49404340	49405250	True	NM_003323,NM_006184	chr19,chr19	-,+	TULP2,NUCB1	-2344,-1084
chr3:44626536-44626770	chr3	+	44626576	44626816	True	NM_173658,NM_181489	chr3,chr3	+,-	ZNF660,ZNF445	-171,-107414
chr19:15996303-15996783	chr19	+	15996340	15996746	True	NM_001082,NR_015379	chr19,chr19	-,+	CYP4F2,UCA1	12188,-56634
chr21:46057164-46057577	chr21	+	46057346	46057536	True	NM_198698,NM_181688,NM_198692	chr21,chr21,chr21	-,+,+	KRTAP12-4,KRTAP10-10,KRTAP10-11	17090,-124,8794
chr10:51841159-51841788	chr10	+	51841296	51841820	True	NM_018232,NM_001143974	chr10,chr10	+,-	FAM21B,ASAH2	-3463,166600
chr10:51841159-51841788	chr10	+	47897886	47897936	False	NM_018232,NM_002900	chr10,chr10	+,-	FAM21B,RBP3	-3914,493105
chr10:51841159-51841788	chr10	+	46236299	46236389	False	NM_174890,NM_015262	chr10,chr10	-,+	ANUBL1,FAM21C	-68048,-13704
chr11:55031487-55032205	chr11	+	55031515	55032168	True	NM_001004700,NM_024114	chr11,chr11	-,+	OR4C11,TRIM48	339738,-1908
chrX:119379111-119380096	chrX	+	119379143	119380144	True	NR_027131,NM_006777,NM_001184742	chrX,chrX,chrX	-,+,+	NKAPP1,ZBTB33,ZBTB33	-21,4462,4465
chr10:121400285-121400923	chr10	+	121400631	121400959	True	NM_004281,NM_003252	chr10,chr10	+,-	BAG3,TIAL1	9922,-44090
chr14:105554988-105555699	chr14	+	105555065	105555451	True	NM_174891,NM_013345	chr14,chr14	+,-	C14orf79,GPR132	-102500,-23311
chr5:76933020-76933222	chr5	+	76933020	76933208	True	NM_032109,NM_003719	chr5,chr5	-,+	OTP,PDE8B	1364,-426365
chr10:47378988-47379489	chr10	+	47379125	47379539	True	NR_024495,NR_027634	chr10,chr10	-,+	LOC642826,FAM35B2	-135631,180
chr10:47378988-47379489	chr10	+	46897045	46897459	False	NR_027632,NM_181519	chr10,chr10	+,-	FAM35B,SYT15	181,73196
chr10:47378988-47379489	chr10	+	49086795	49087209	False	NM_001137548,NM_002750	chr10,chr10	-,+	FAM25C,MAPK8	120670,522477
chr19:40815339-40817003	chr19	+	40815420	40816870	True	NM_001031696,NM_001626	chr19,chr19	+,-	PLD3,AKT2	37461,-24155
chr14:89289807-89290069	chr14	+	89289808	89290108	True	NM_183387,NM_144596,NM_198310,NM_198309	chr14,chr14,chr14,chr14	-,+,+,+	EML5,TTC8,TTC8,TTC8	-30712,869,869,869
chr14:37617137-37618674	chr14	+	37617577	37618562	True	NM_001171170,NR_033240	chr14,chr14	-,+	SLC25A21,LOC100129794	23364,22668
chr17:73716589-73717043	chr17	+	73716700	73716928	True	NM_000154,NM_000213,NM_001005619,NM_001005731	chr17,chr17,chr17,chr17	-,+,+,+	GALK1,ITGB4,ITGB4,ITGB4	44402,587,3847,587
chr13:96079465-96080996	chr13	+	96079757	96079823	True	NM_001105515,NM_182848,NM_001160100	chr13,chr13,chr13	-,+,+	ABCC4,CLDN10,CLDN10	-126070,6029,6029
chr10:71984577-71985063	chr10	+	71984775	71984933	True	NM_018649,NM_021129	chr10,chr10	+,-	H2AFY2,PPA1	-172477,8317
chr17:1929357-1929858	chr17	+	1929499	1929857	True	NM_178568,NM_001383	chr17,chr17	-,+	RTN4RL1,DPH1	-1321,3573
chr5:176739757-176740033	chr5	+	176739808	176740048	True	NM_130781,NM_013237,NM_001142935,NM_031300,NM_001031677	chr5,chr5,chr5,chr5,chr5	-,+,-,-,-	RAB24,PRELID1,MXD3,MXD3,RAB24	-9064,-9024,-516,-516,-9064
chr1:186321610-186322426	chr1	+	186321696	186322236	True	NM_003292,NM_001164245	chr1,chr1	-,+	TPR,C1orf27	22279,22653
chr22:41700319-41701070	chr22	+	41700430	41700966	True	NM_017590,NM_002883	chr22,chr22	+,-	ZC3H7B,RANGAP1	-2914,-18214
chr2:222435665-222436215	chr2	+	222435675	222436121	True	NM_153038,NM_004438	chr2,chr2	+,-	CCDC140,EPHA4	726744,939
chr7:150028416-150029003	chr7	+	150028485	150029043	True	NM_001142928,NM_138434,NM_002889,NM_001164458,NM_023942	chr7,chr7,chr7,chr7,chr7	+,+,-,-,+	LRRC61,C7orf29,RARRES2,ACTR3C,LRRC61	-8240,-1598,9770,-7727,-8240
chr13:52437976-52439531	chr13	+	52438125	52439286	True	NR_027048,NM_031290	chr13,chr13	-,+	NCRNA00282,CCDC70	-18839,-2074
chr15:63669694-63670509	chr15	+	63669803	63670301	True	NM_206925,NM_001218,NM_031301	chr15,chr15,chr15	-,-,+	CA12,CA12,APH1B	3826,3826,-100111
chr17:20537156-20538080	chr17	+	20537233	20537979	True	NM_001190790,NR_029393	chr17,chr17	+,-	CDRT15L2,KRT16P3	-54247,-129422
chr17:20537156-20538080	chr17	+	15721720	15722470	False	NM_006470,NR_002211	chr17,chr17	-,+	TRIM16,MEIS3P1	-135527,-31607
chr22:36045476-36046831	chr22	+	36045654	36046592	True	NM_203377,NM_030641	chr22,chr22	-,+	MB,APOL6	-26253,-1281
chr12:56512910-56514354	chr12	+	56512970	56514308	True	NM_001130420,NM_021104,NM_001184796,NM_015292,NM_032786,NM_001035267	chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,+,+,+	SMARCC2,RPL41,ESYT1,ESYT1,ZC3H10,RPL41	69093,-2647,7677,7677,-991,-2647
chr17:78448593-78448825	chr17	+	78448612	78448768	True	NM_002522,NM_173627	chr17,chr17	-,+	NPTX1,FLJ35220	1686,-59696
chr16:81347426-81348082	chr16	+	81347456	81348118	True	NM_001076780,NM_022041	chr16,chr16	-,+	PKD1L2,GAN	-93481,452
chr4:85817330-85818324	chr4	+	85817523	85818358	True	NM_014991,NR_015359	chr4,chr4	-,+	WDFY3,NCRNA00247	69236,69612
chr15:78525117-78525418	chr15	+	78525302	78525372	True	NM_015162,NM_018602,NM_001199377	chr15,chr15,chr15	-,+,-	ACSBG1,DNAJA4,ACSBG1	1727,31114,1727
chr19:8811190-8811938	chr19	+	8811352	8811935	True	NM_178525,NM_001004699	chr19,chr19	-,+	ACTL9,OR2Z1	-2180,29455
chr12:108078899-108079456	chr12	+	108078939	108079404	True	NM_012406,NM_007062	chr12,chr12	-,+	PRDM4,PWP1	75560,185
chr17:72577098-72578845	chr17	+	72577409	72578743	True	NM_152460,NM_001115152	chr17,chr17	+,-	C17orf77,CD300LD	2313,9677
chr22:29656268-29656696	chr22	+	29656307	29656735	True	NM_012265,NM_005243,NM_013986,NM_001163285,NM_001163287,NM_001163286	chr22,chr22,chr22,chr22,chr22,chr22	-,+,+,+,+,+	RHBDD3,EWSR1,EWSR1,EWSR1,EWSR1,EWSR1	7229,7262,7262,7262,7262,7262
chr1:13612195-13612949	chr1	+	13612391	13612981	True	NM_001012277,NM_001012276,NM_001098376	chr1,chr1,chr1	-,-,+	PRAMEF7,PRAMEF8,PRAMEF15	-1904,-841,28991
chr1:13612195-13612949	chr1	+	13391606	13392184	False	NM_001012276,NM_001098376	chr1,chr1	-,+	PRAMEF8,PRAMEF15	-841,28991
chr1:13612195-13612949	chr1	-	12975019	12975608	False	NM_001012277,NM_001012276,NM_001039361	chr1,chr1,chr1	+,+,-	PRAMEF7,PRAMEF8,PRAMEF10	1904,841,-16925
chr8:103541274-103541871	chr8	+	103541306	103541895	True	NM_024410,NM_015902	chr8,chr8	+,-	ODF1,UBR5	21952,-116389
chr6:89766980-89768718	chr6	+	89767296	89768758	True	NM_006813,NM_080743	chr6,chr6	+,-	PNRC1,SRSF12	21670,59092
chr6:27441346-27441730	chr6	+	27441481	27441637	True	NM_001076781,NM_007149	chr6,chr6	+,-	ZNF391,ZNF184	-85012,-584
chr2:99553828-99554971	chr2	+	99553866	99555002	True	NM_207362,NM_144706	chr2,chr2	-,+	C2orf55,C2orf15	-1182,203182
chr1:202975469-202975826	chr1	+	202975636	202975744	True	NR_036557,NM_138391,NM_001079809	chr1,chr1,chr1	-,+,+	LOC401980,TMEM183A,TMEM183B	705,789,791
chr1:46597138-46597762	chr1	+	46597196	46597762	True	NM_003629,NM_005727,NM_001114172	chr1,chr1,chr1	-,+,-	PIK3R3,TSPAN1,PIK3R3	668,42986,996
chr3:169683919-169684512	chr3	+	169683930	169684256	True	NM_003262,NR_027622,NR_024409	chr3,chr3,chr3	+,-,-	SEC62,LOC100128164,LOC100128164	323,316,316
chr8:11185469-11187031	chr8	+	11185503	11186377	True	NM_054028,NM_173683	chr8,chr8	+,-	AMAC1L2,XKR6	2117,-126628
chr1:154958783-154959712	chr1	+	154958913	154959509	True	NM_025207,NM_003029,NM_018655,NM_001184892,NM_001184891,NM_201398	chr1,chr1,chr1,chr1,chr1,chr1	+,-,+,+,+,+	FLAD1,SHC1,LENEP,FLAD1,FLAD1,FLAD1	-3205,-11954,6552,-3205,-3205,-3205
chr16:12071305-12072705	chr16	+	12071315	12072588	True	NM_001130007,NM_032167	chr16,chr16	-,+	GSPT1,RUNDC2A	-60796,-771
chr10:118114090-118115564	chr10	+	118114328	118114983	True	NM_005264,NM_198515	chr10,chr10	-,+	GFRA1,C10orf96	-81202,-30439
chr10:29105014-29105912	chr10	+	29105148	29105878	True	NR_033805,NM_012342	chr10,chr10	-,+	LOC220906,BAMBI	-283865,-138783
chr6:117088130-117089545	chr6	+	117088230	117089112	True	NM_001085480,NM_002269	chr6,chr6	-,+	FAM162B,KPNA5	-1344,-85914
chr17:7757571-7757804	chr17	+	7757663	7757729	True	NM_032356,NM_144607,NM_203411	chr17,chr17,chr17	-,+,+	LSMD1,CYB5D1,TMEM88	3497,3334,654
chr2:107125822-107126097	chr2	+	107125835	107126087	True	NM_001144013,NR_003506	chr2,chr2	-,+	RGPD3,PLGLA	-41034,-123117
chr2:107125822-107126097	chr2	-	87066811	87066949	False	NR_037931,NM_001178100	chr2,chr2	+,-	LOC100286979,CD8B	21998,22148
chr8:9411333-9411707	chr8	+	9411430	9411744	True	NM_003747,NR_024281	chr8,chr8	+,-	TNKS,LOC157627	1700,349145
chr15:66642989-66644795	chr15	+	66643611	66644576	True	NM_017858,NR_004388,NM_002755	chr15,chr15,chr15	-,-,+	TIPIN,SCARNA14,MAP2K1	4528,-3931,34634
chr8:67781170-67781746	chr8	+	67781316	67781799	True	NR_002598,NM_173518,NM_001136160,NM_001136161	chr8,chr8,chr8,chr8	-,+,+,+	SNORD87,C8orf45,C8orf45,C8orf45	53039,1184,1937,1184
chr1:225646730-225647805	chr1	+	225646856	225647711	True	NM_194442,NM_001130440	chr1,chr1	-,+	LBR,SRP9	-30299,317803
chr2:203139040-203140915	chr2	+	203139297	203140764	True	NR_003058,NM_015934,NM_003352	chr2,chr2,chr2	+,+,-	SNORD70,NOP58,SUMO1	389,-8834,-35975
chr5:76934314-76934636	chr5	+	76934321	76934405	True	NM_032109,NM_003719	chr5,chr5	-,+	OTP,PDE8B	167,-427666
chr20:30714696-30715333	chr20	+	30714874	30715297	True	NR_002781,NM_014742	chr20,chr20	-,+	TSPY26P,TM9SF4	62917,-17623
chr17:17400315-17401024	chr17	+	17400553	17401023	True	NM_016084,NM_018019,NM_001199989	chr17,chr17,chr17	-,+,-	RASD1,MED9,RASD1	-844,-20304,-844
chr9:14686039-14687388	chr9	+	14686283	14687350	True	NR_003920,NM_178566	chr9,chr9	+,-	LOC389705,ZDHHC21	305974,6190
chr1:45476968-45477634	chr1	+	45477067	45477623	True	NM_024602,NR_036510,NM_000374	chr1,chr1,chr1	-,+,+	HECTD3,UROD,UROD	-40,181,181
chr14:23308617-23309876	chr14	+	23308633	23309577	True	NM_004995,NM_181304,NM_181305,NM_181306,NM_181307,NM_180982,NM_001126106,NM_178336	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,+,+,+,-,+	MMP14,MRPL52,MRPL52,MRPL52,MRPL52,MRPL52,SLC7A7,MRPL52	-2891,-9592,-9592,-9592,-9592,-9592,-19619,-9592
chr12:108525948-108527507	chr12	+	108526160	108527134	True	NM_014653,NM_001142345	chr12,chr12	+,-	WSCD2,CMKLR1	-2700,187365
chr1:169455276-169455574	chr1	+	169455281	169455611	True	NM_003666,NM_006996	chr1,chr1	+,-	BLZF1,SLC19A2	-118138,-73
chr10:15393255-15395027	chr10	+	15393261	15395011	True	NM_183005,NM_001010924	chr10,chr10	+,-	RPP38,FAM171A1	-254130,18097
chr9:34627903-34628236	chr9	+	34627980	34628241	True	NM_000155,NM_001017363,NM_147157,NM_024348,NM_007234,NM_005866	chr9,chr9,chr9,chr9,chr9,chr9	+,-,-,-,-,-	GALT,ARID3C,SIGMAR1,DCTN3,DCTN3,SIGMAR1	18393,31,9577,-7484,-7484,9577
chr1:27119111-27120365	chr1	+	27119182	27120098	True	NM_001202554,NM_018066,NM_017837	chr1,chr1,chr1	+,-,+	PIGV,GPN2,PIGV	-4554,96822,-4779
chr6:33379191-33379659	chr6_qbl_hap6	+	4611443	4611780	False	NM_001350,NM_002263	chr6_qbl_hap6,chr6_qbl_hap6	-,+	DAXX,KIFC1	-88401,-19955
chr6:33379191-33379659	chr6	+	33379209	33379546	True	NM_002636,NM_001014838,NM_006772,NM_001014433,NM_001014837,NM_001014840,NM_024165,NR_027692,NM_015921	chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6,chr6	+,-,+,-,-,-,+,+,-	PHF1,CUTA,SYNGAP1,CUTA,CUTA,CUTA,PHF1,PHF1,CUTA	-488,6569,8300,6569,6569,6569,-488,-488,6569
chr6:33379191-33379659	chr6_ssto_hap7	+	4859457	4859794	False	NM_002636,NM_001014838,NM_006772,NM_001014433,NM_001014837,NM_001014840,NM_024165,NR_027692	chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7,chr6_ssto_hap7	+,-,+,-,-,-,+,+	PHF1,CUTA,SYNGAP1,CUTA,CUTA,CUTA,PHF1,PHF1	-488,6567,8298,6567,6567,6567,-488,-488
chr8:33370315-33370618	chr8	+	33370448	33370666	True	NM_001102401,NM_025115,NM_032509	chr8,chr8,chr8	-,-,+	C8orf41,C8orf41,MAK16	87,40,-27817
chr4:88900475-88901091	chr4	+	88900651	88901130	True	NM_001040058,NM_001040060,NM_000582,NM_004827	chr4,chr4,chr4,chr4	+,+,+,-	SPP1,SPP1,SPP1,ABCG2	-3907,-3907,-3907,178931
chr16:122753-123351	chr16	+	122880	123282	True	NM_022450,NM_001015052,NM_002434,NM_001015054	chr16,chr16,chr16,chr16	-,+,+,+	RHBDF1,MPG,MPG,MPG	-251,4886,4886,3735
chr2:174622924-174624757	chr2	+	174623063	174624787	True	NM_145810,NM_001017371	chr2,chr2	+,-	CDCA7,SP3	-403553,204210
chr19:58568534-58570430	chr19	+	58568716	58570424	True	NM_001164530,NM_001145543,NM_007134,NM_003436,NM_001164529,NM_001164527	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+	ZNF135,ZSCAN18,ZNF135,ZNF135,ZNF135,ZNF135	182,39356,182,182,182,182
chr11:35430162-35431601	chr11	+	35430489	35431569	True	NM_014344,NM_004171	chr11,chr11	+,-	FJX1,SLC1A2	208165,9586
chr10:102503513-102503842	chr10	+	102503543	102503881	True	NM_003990,NM_005004,NM_003989,NM_003988,NM_003987,NM_000278	chr10,chr10,chr10,chr10,chr10,chr10	+,-,+,+,+,+	PAX2,NDUFB8,PAX2,PAX2,PAX2,PAX2	1586,-213907,1586,1586,1586,1586
chr13:60581344-60582247	chr13	+	60581652	60582189	True	NM_030932,NM_001146071	chr13,chr13	-,+	DIAPH3,TDRD3	5213,388401
chr19:54371075-54371402	chr19	+	54371136	54371384	True	NM_138373,NM_144687,NM_001020821,NM_001020820,NM_001020818,NM_001020819	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+	MYADM,NLRP12,MYADM,MYADM,MYADM,MYADM	-50,-43488,1275,-1576,1396,-50
chr12:50015088-50015637	chr12	+	50015169	50015591	True	NM_012272,NM_001031698,NM_032130	chr12,chr12,chr12	+,+,-	PRPF40B,PRPF40B,FAM186B	1811,8735,-15736
chr9:103951603-103952704	chr9	+	103951691	103952731	True	NM_001127610,NM_017753	chr9,chr9	-,+	BAAT,LPPR1	193120,-4433
chr4:156690331-156691919	chr4	+	156690380	156691916	True	NM_017419,NM_000857	chr4,chr4	-,+	ACCN5,GUCY1B3	95559,-10305
chr1:2282638-2282962	chr1	+	2282682	2283004	True	NM_007033,NR_024489	chr1,chr1	+,-	RER1,LOC100129534	40209,1146
chr5:139723577-139724910	chr5	+	139723771	139724939	True	NM_001945,NM_031467	chr5,chr5	-,+	HBEGF,SLC4A9	1299,14847
chr22:35595803-35597378	chr22	+	35596105	35597191	True	NM_001003681,NM_005368	chr22,chr22	+,-	HMGXB4,MB	56253,416243
chr15:50365113-50367059	chr15	+	50365951	50367101	True	NM_001159629,NM_024837	chr15,chr15	+,-	SLC27A2,ATP8B4	107291,44368
chr7:28725356-28725622	chr7	+	28725419	28725573	True	NM_014817,NM_001011666	chr7,chr7	-,+	TRIL,CREB5	272506,147
chr12:12503378-12504630	chr12	+	12503633	12504432	True	NM_058169,NM_018050,NR_024061	chr12,chr12,chr12	+,-,-	LOH12CR1,MANSC1,LOH12CR2	5587,-464,5626
chr4:166199857-166200829	chr4	+	166200062	166200742	True	NM_001017369,NR_026575	chr4,chr4	+,-	SC4MOL,GK3P	48075,483
chr4:166199857-166200829	chr4	+	120316007	120316057	False	NR_037596,NR_037630	chr4,chr4	-,+	FLJ14186,LOC645513	15808,59880
chr8:121426664-121428454	chr8	+	121426912	121428210	True	NM_022045,NM_014078	chr8,chr8	+,-	MTBP,MRPL13	29455,29487
chr16:3545368-3545904	chr16	+	3545372	3545816	True	NM_015041,NM_001080524	chr16,chr16	+,-	CLUAP1,C16orf90	5146,49
chr22:19131223-19131901	chr22	+	19131391	19131862	True	NM_005315,NM_053006,NM_022719	chr22,chr22,chr22	-,+,-	GSC2,TSSK2,DGCR14	5984,-13121,378
chr12:95397845-95399318	chr12	+	95398051	95399111	True	NR_036685,NM_018838	chr12,chr12	+,-	KRT19P2,NDUFA12	-169879,-540
chr2:108450385-108451618	chr2	+	108450470	108450541	True	NM_182588,NR_024439	chr2,chr2	+,-	RGPD4,LOC729121	-7133,-7887
chr1:3711197-3711472	chr1	+	3711197	3711347	True	NM_020710,NM_001163724	chr1,chr1	-,+	LRRC47,LOC388588	1775,-21905
chr1:228295695-228296588	chr1	+	228295827	228296504	True	NM_181456,NM_181454,NM_181455,NM_181441,NR_037415,NM_181465,NM_181464,NM_024319,NM_181463,NM_181462	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,+,-,-,-,-,-	MRPL55,MRPL55,MRPL55,MRPL55,MIR3620,MRPL55,MRPL55,C1orf35,MRPL55,MRPL55	559,559,559,559,-10914,559,559,-4805,559,559
chr5:140090156-140090636	chr5	+	140090493	140090558	True	NR_026704,NM_002109,NR_026703	chr5,chr5,chr5	+,-,+	VTRNA1-2,HARS,VTRNA1-1	7952,-19522,302
chr10:91064032-91065832	chr10	+	91064049	91065878	True	NM_001547,NM_000235	chr10,chr10	+,-	IFIT2,LIPA	-2394,-52389
chr17:36955128-36955427	chr17	+	36955184	36955350	True	NM_003559,NM_002795	chr17,chr17	-,+	PIP4K2B,PSMB3	858,-46233
chr17:41365166-41366089	chr17	+	41365184	41366066	True	NM_007300,NM_145041	chr17,chr17	-,+	BRCA1,TMEM106A	-87684,-1341
chr19:14640308-14640666	chr19	+	14640389	14640715	True	NR_038104,NR_030369,NM_138501,NM_006145,NR_038103	chr19,chr19,chr19,chr19,chr19	+,+,+,-,+	TECR,MIR639,TECR,DNAJB1,TECR	-61,-85,-61,-11188,-61
chr7:7250253-7250931	chr7	+	7250258	7250844	True	NM_020156,NR_034022	chr7,chr7	+,-	C1GALT1,LOC100131257	-28063,-113841
chr19:34893007-34894177	chr19	+	34893232	34893972	True	NR_027620,NM_032346	chr19,chr19	-,+	LOC643719,PDCD2L	174674,1330
chr8:67034138-67035301	chr8	+	67034184	67035341	True	NM_000756,NM_184086,NM_184085,NM_033058,NM_184087	chr8,chr8,chr8,chr8,chr8	-,+,+,+,+	CRH,TRIM55,TRIM55,TRIM55,TRIM55	55555,3936,3936,3936,3936
chr5:146257109-146257354	chr5	+	146257129	146257385	True	NM_001127381,NM_145001,NM_004576,NM_181675	chr5,chr5,chr5,chr5	-,+,-,-	PPP2R2B,STK32A,PPP2R2B,PPP2R2B	1122,357193,824,992
chr19:10198143-10198960	chr19	+	10198149	10198649	True	NM_018381,NM_031917	chr19,chr19	+,-	C19orf66,ANGPTL6	-1394,14826
chr20:44639929-44640351	chr20	+	44640038	44640392	True	NM_004994,NM_001134771,NM_022095	chr20,chr20,chr20	+,+,-	MMP9,SLC12A5,ZNF335	-2542,9936,-39205
chrX:153283437-153283643	chrX	+	153283487	153283585	True	NR_031757,NM_001569,NR_036174,NM_001025242,NM_001025243	chrX,chrX,chrX,chrX,chrX	-,-,+,-,-	MIR718,IRAK1,MIR3202-1,IRAK1,IRAK1	1905,1807,-36990,1807,1807
chr2:85183955-85184673	chr2	+	85183982	85184505	True	NM_020122,NM_001080824	chr2,chr2	+,-	KCMF1,C2orf89	13725,-75730
chr19:1353420-1353676	chr19	+	1353591	1353666	True	NR_024247,NM_000156,NM_032853	chr19,chr19,chr19	+,-,+	MUM1,GAMT,MUM1	2656,47937,1309
chr15:31116379-31116951	chr15	+	31116561	31116996	True	NM_017762,NM_001146095	chr15,chr15	-,+	MTMR10,FAN1	166861,79058
chr3:108048484-108049935	chr3	+	108048498	108049922	True	NM_007072,NM_018010	chr3,chr3	+,-	HHLA2,IFT57	-27217,-107081
chr22:42092972-42093358	chr22	+	42092976	42093260	True	NM_001003796,NM_001142964,NM_152513	chr22,chr22,chr22	-,+,+	NHP2L1,C22orf46,MEI1	-8063,-6482,2257
chr9:140144829-140145114	chr9	+	140144848	140145146	True	NM_001004353,NM_015456,NM_001001710,NM_006088	chr9,chr9,chr9,chr9	+,+,-,+	C9orf173,COBRA1,FAM166A,TUBB2C	583,4612,-2626,-9188
chr5:140763068-140763698	chr5	+	140763238	140763714	True	NM_032086,NM_032087,NM_003736,NM_032098,NM_032088,NM_018919,NM_005642,NM_014004,NM_018920	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,-,+,+	PCDHGA6,PCDHGA7,PCDHGB4,PCDHGB4,PCDHGA8,PCDHGA6,TAF7,PCDHGA8,PCDHGA7	-9638,-822,3737,3737,7768,-9638,-62887,7768,-822
chrX:134046595-134048484	chrX	+	134047856	134048530	True	NM_019556,NM_001163438	chrX,chrX	-,+	MOSPD1,LOC644538	817,76437
chr17:46682414-46683015	chr17	+	46682414	46683032	True	NM_004502,NM_024016,NM_018952,NR_033205	chr17,chr17,chr17,chr17	-,-,-,+	HOXB7,HOXB8,HOXB6,LOC404266	5401,9319,-80,-9151
chr16:25707910-25709285	chr16	+	25707951	25709001	True	NM_001012981,NM_006040	chr16,chr16	-,+	ZKSCAN2,HS3ST4	-439096,-4662
chrX:129537533-129538635	chrX	+	129537694	129538572	True	NM_016024,NM_178471	chrX,chrX	+,-	RBMX2,GPR119	-1802,-18183
chr10:31602572-31603042	chr10	+	31602772	31603089	True	NM_001174093,NM_001174094,NM_001174095,NM_001174096,NM_030751,NR_024284,NM_001128128	chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,-,+	ZEB1,ZEB1,ZEB1,ZEB1,ZEB1,LOC220930,ZEB1	5011,6974,5011,5011,5011,4988,6974
chr4:22698227-22698755	chr4	+	22698337	22698797	True	NM_001128432,NM_145290,NM_020973	chr4,chr4,chr4	+,-,+	GBA3,GPR125,GBA3	-3851,-180665,-3851
chr17:73449074-73449859	chr17	+	73449334	73449622	True	NM_014738,NM_203506	chr17,chr17	+,-	KIAA0195,GRB2	3041,-47544
chr2:26702187-26702394	chr2	+	26702191	26702443	True	NM_194322,NM_194323,NM_004802,NM_145038	chr2,chr2,chr2,chr2	-,-,-,+	OTOF,OTOF,OTOF,CCDC164	-1281,-1281,-1281,-77458
chrX:47062348-47062697	chrX	+	47062353	47062735	True	NM_003334,NR_024235,NR_024616	chrX,chrX,chrX	+,-,+	UBA1,NDUFB11,INE1	-9203,-57744,1511
chr7:117820701-117822617	chr7	+	117820827	117822312	True	NM_033427,NM_016200	chr7,chr7	-,+	CTTNBP2,NAA38	-307266,1773
chr1:225608384-225608915	chr1	+	225608504	225608757	True	NM_194442,NM_002296,NM_001130440	chr1,chr1,chr1	-,-,+	LBR,LBR,SRP9	7859,7117,356757
chr7:151511745-151511995	chr7	+	151511771	151512011	True	NM_145292,NM_001040633	chr7,chr7	+,-	GALNTL5,PRKAG2	141452,-4
chr2:238767457-238768079	chr2	+	238767467	238768063	True	NM_005855,NR_033308	chr2,chr2	+,-	RAMP1,RAB17	123,-267698
chr3:52805117-52805850	chr3	+	52805155	52805540	True	NM_003157,NM_001193533,NM_001166435,NM_001166434,NM_001166436,NM_002215	chr3,chr3,chr3,chr3,chr3,chr3	-,-,+,+,+,+	NEK4,NEK4,ITIH1,ITIH1,ITIH1,ITIH1	-190,-190,8396,6982,8396,6067
chr1:28259979-28260846	chr1	+	28260113	28260190	True	NM_001009568,NM_002946,NM_014474	chr1,chr1,chr1	+,-,+	SMPDL3B,RPA2,SMPDL3B	1313,-18877,1313
chr5:33442903-33443138	chr5	+	33442904	33443176	True	NM_152295,NM_030955	chr5,chr5	+,-	TARS,ADAMTS12	-2060,449002
chr16:29908406-29909599	chr16	+	29908433	29909590	True	NM_012410,NM_001114099,NM_001114100,NM_181718,NM_201575	chr16,chr16,chr16,chr16,chr16	-,-,-,+,-	SEZ6L2,SEZ6L2,SEZ6L2,ASPHD1,SEZ6L2	1040,1040,1040,2556,1040
chr7:751506-751764	chr7	+	751640	751758	True	NM_001164762,NM_002735,NM_001164761,NM_017802	chr7,chr7,chr7,chr7	-,-,-,+	PRKAR1B,PRKAR1B,PRKAR1B,HEATR2	869,453,1136,14579
chr5:166719839-166720365	chr5	+	166719838	166720178	True	NM_001122679,NR_029520	chr5,chr5	+,-	ODZ2,MIR103-1	-8046,1267850
chr4:119750153-119750821	chr4	+	119750194	119750335	True	NM_001128933,NM_014822	chr4,chr4	+,-	SYNPO2,SEC24D	59660,7050
chr4:1723923-1724149	chr4	+	1724082	1724142	True	NM_001127266,NM_006342,NM_138385	chr4,chr4,chr4	-,+,-	TMEM129,TACC3,TMEM129	-998,-867,-998
chr19:40812400-40812786	chr19	+	40812590	40812658	True	NM_001031696,NM_001626	chr19,chr19	+,-	PLD3,AKT2	41673,-21325
chr19:6670863-6671743	chr19	+	6670880	6671229	True	NM_003807,NM_172014,NM_004240	chr19,chr19,chr19	-,-,+	TNFSF14,TNFSF14,TRIP10	-281,-281,68477
chrX:77035457-77036647	chrX	+	77035456	77036623	True	NM_138270,NM_001866,NM_000489	chrX,chrX,chrX	-,+,-	ATRX,COX7B,ATRX	5147,118337,5147
chr18:24127673-24127917	chr18	+	24127685	24127947	True	NM_001136205,NR_026908,NM_001142730	chr18,chr18,chr18	-,+,-	KCTD1,C18orf16,KCTD1	1502,317324,603
chr11:69488919-69489123	chr11	+	69488926	69489144	True	NM_053056,NM_153451	chr11,chr11	+,-	CCND1,ORAOV1	-33104,1071
chr9:135035707-135036316	chr9	+	135035748	135036260	True	NM_032536,NM_004269	chr9,chr9	+,-	NTNG2,MED27	1073,-80495
chr17:3514717-3515188	chr17	+	3514904	3515096	True	NM_080704,NM_001031681	chr17,chr17	-,+	TRPV1,CTNS	-2199,24665
chr2:86425085-86425985	chr2	+	86425369	86425867	True	NM_006839,NM_016622,NM_001100170,NM_145644,NM_001100169	chr2,chr2,chr2,chr2,chr2	-,+,-,+,-	IMMT,MRPL35,IMMT,MRPL35,IMMT	-2476,688,-2476,688,-2476
chr3:32022951-32023196	chr3	+	32022981	32023243	True	NM_017784,NM_001137674,NM_001174060	chr3,chr3,chr3	-,+,-	OSBPL10,ZNF860,OSBPL10	149,22,149
chr7:120496688-120497075	chr7	+	120496701	120497107	True	NM_198267,NM_012338	chr7,chr7	+,-	ING3,TSPAN12	93709,1120
chr17:38717439-38717832	chr17	+	38717544	38717841	True	NM_001552,NM_001838	chr17,chr17	+,-	IGFBP4,CCR7	-117919,3946
chrX:47052822-47053169	chrX	+	47052892	47053156	True	NM_003334,NM_153280,NR_024235	chrX,chrX,chrX	+,+,-	UBA1,UBA1,NDUFB11	44,-2751,-48283
chr14:31676708-31676922	chr14	+	31676747	31676823	True	NM_015382,NM_001128126	chr14,chr14	-,+	HECTD1,AP4S1	-58,-182115
chr12:96434195-96435465	chr12	+	96434216	96435186	True	NM_000895,NM_152435	chr12,chr12	-,+	LTA4H,AMDHD1	-4851,-97198
chr15:74530207-74531450	chr15	+	74530839	74531365	True	NM_001199040,NM_025055	chr15,chr15	-,+	STRA6,CCDC33	-28793,-2229
chr2:176032556-176032955	chr2	+	176032687	176032907	True	NM_024583,NM_001880,NR_030630	chr2,chr2,chr2	+,-,-	SCRN3,ATF2,MIR933	-772281,40,-250
chr9:138370298-138370821	chr9	+	138370326	138370711	True	NM_014811,NM_001048265	chr9,chr9	+,-	KIAA0649,C9orf116	936,21100
chr12:54396352-54396848	chr12	+	54396362	54396688	True	NM_006897,NM_022658,NR_003716	chr12,chr12,chr12	+,+,-	HOXC9,HOXC8,HOTAIR	-2536,6201,-33847
chr19:378072-378308	chr19	+	378071	378187	True	NM_016585,NM_130760,NM_199202	chr19,chr19,chr19	-,+,-	THEG,MADCAM1,THEG	-2062,118302,-2062
chr17:28623643-28624154	chr17	+	28623927	28624018	True	NM_001304,NM_000386	chr17,chr17	+,-	CPD,BLMH	81923,-4743
chr14:104179379-104179697	chr14	+	104179549	104179679	True	NM_024071,NM_005432,NM_001198953,NM_001100118,NM_001100119	chr14,chr14,chr14,chr14,chr14	+,-,+,-,-	ZFYVE21,XRCC3,ZFYVE21,XRCC3,XRCC3	2401,2194,2401,2194,2194
chr16:15737581-15738867	chr16	+	15737627	15738353	True	NM_001143979,NM_001184998,NM_014647,NR_030159,NM_001184999,NM_017668	chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,+,-,+	NDE1,KIAA0430,KIAA0430,MIR484,KIAA0430,NDE1	-554,-604,-604,-527,-604,5729
chr4:37467580-37468642	chr4	+	37467603	37468386	True	NM_001104629,NM_001085399	chr4,chr4	+,-	C4orf19,RELL1	-12110,219670
chr14:65441320-65441944	chr14	+	65441324	65441656	True	NM_002028,NM_198686	chr14,chr14	+,-	FNTB,RAB15	11850,-2449
chr17:46049284-46049840	chr17	+	46049377	46049830	True	NM_024320,NM_176096	chr17,chr17	-,+	PRR15L,CDK5RAP3	-14267,-1000
chr17:78154039-78154577	chr17	+	78154039	78154486	True	NM_052819,NM_024110,NM_014740	chr17,chr17,chr17	+,+,-	CARD14,CARD14,EIF4A3	7112,-1809,-33057
chr6:44310531-44311029	chr6	+	44310656	44311028	True	NM_145026,NM_020745	chr6,chr6	+,-	SPATS1,AARS2	-310,-29593
chr11:46740030-46741294	chr11	+	46740053	46741315	True	NM_000506,NM_004308	chr11,chr11	+,-	F2,ARHGAP1	3,-17933
chr2:43827417-43828840	chr2	+	43828506	43828715	True	NM_022065,NM_001083953,NM_172069	chr2,chr2,chr2	-,-,+	THADA,THADA,PLEKHH2	-5321,-5393,35723
chr8:29386319-29386602	chr8	+	29386401	29386486	True	NR_024473,NM_001394	chr8,chr8	+,-	LOC286135,DUSP4	392542,-178134
chr2:204571017-204571860	chr2	+	204571088	204571730	True	NM_006139,NM_203365	chr2,chr2	+,-	CD28,RAPH1	30,-171030
chrY:27455058-27456972	chrY	+	27455554	27456669	True	NR_002179,NR_001555	chrY,chrY	-,+	TTTY17C,GOLGA2P2Y	-124634,144788
chrY:27455058-27456972	chrY	-	26505760	26506875	False	NR_002195,NR_001526	chrY,chrY	-,+	GOLGA2P3Y,TTTY17A	-144782,124603
chr7:115851537-115852528	chr7	+	115851605	115852542	True	NM_015641,NM_012252	chr7,chr7	+,-	TES,TFEC	-1109,-180807
chr1:23858735-23859464	chr1	+	23858754	23859512	True	NM_004091,NR_027042	chr1,chr1	-,+	E2F2,MDS2	-1042,94311
chr2:91883418-91885067	chr7	+	151917757	151917823	False	NM_022087,NM_170606	chr7,chr7	+,-	GALNT11,MLL3	-195030,215317
chr2:91883418-91885067	chr2	+	91883557	91884825	True	NR_003503,NR_027238	chr2,chr2	+,-	GGT8P,LOC654342	78542,-35582
chr2:91883418-91885067	chr1	-	148891393	148892672	False	NR_027355,NM_001024599	chr1,chr1	+,-	LOC645166,HIST2H2BF	35613,506618
chr11:129814833-129815316	chr11	+	129814864	129815272	True	NR_024233,NM_199439,NM_199438	chr11,chr11,chr11	+,-,-	NCRNA00167,PRDM10,PRDM10	57246,2309,2309
chr1:67588808-67590295	chr1	+	67588908	67589943	True	NM_001013674,NM_144701	chr1,chr1	-,+	C1orf141,IL23R	4330,42225
chr11:67573796-67575540	chr11	+	67573995	67575588	True	NM_007103,NM_001161473,NR_024249	chr11,chr11,chr11	+,+,-	NDUFV1,ALDH3B1,LOC645332	-199724,200459,-1188
chr9:27517568-27517795	chr9	+	27517665	27517762	True	NM_024761,NM_020124	chr9,chr9	-,+	MOBKL2B,IFNK	12151,6549
chr15:40329302-40330936	chr15	+	40329499	40330831	True	NM_001013703,NM_003134	chr15,chr15	+,-	EIF2AK4,SRP14	-103203,608
chr3:64008891-64009140	chr3	+	64008909	64009177	True	NM_014814,NM_001128149	chr3,chr3	-,+	PSMD6,ATXN7	-7,-55540
chr5:112628790-112629017	chr5	+	112628835	112629035	True	NM_002387,NM_022828	chr5,chr5	-,+	MCC,YTHDC2	1627,220355
chr7:37907997-37908352	chr7	+	37908045	37908394	True	NM_003014,NM_016616	chr7,chr7	-,+	SFRP4,TXNDC3	48184,-19904
chr12:49657404-49657925	chr12	+	49657453	49657729	True	NM_001008223,NM_032704	chr12,chr12	-,+	C1QL4,TUBA1C	73292,1135
chr2:108458844-108459565	chr2	+	108458908	108459256	True	NM_182588,NR_024439	chr2,chr2	+,-	RGPD4,LOC729121	-15571,-16325
chr2:108458844-108459565	chr2	+	87184546	87184596	False	NM_001032392,NM_001024457	chr2,chr2	-,+	PLGLB1,RGPD1	64423,-39859
chr2:108458844-108459565	chr2	-	88111957	88112007	False	NM_001078170,NM_001032392	chr2,chr2	-,+	RGPD2,PLGLB1	13329,-64398
chr2:108458844-108459565	chr2	+	109351431	109351481	False	NM_022336,NM_006267	chr2,chr2	-,+	EDAR,RANBP2	254397,-15545
chr2:108458844-108459565	chr2	-	107069590	107069938	False	NM_001144013,NR_003506	chr2,chr2	-,+	RGPD3,PLGLA	14913,-66872
chr8:56686138-56687596	chr8	+	56686171	56687492	True	NM_152417,NM_024831	chr8,chr8	-,+	TMEM68,TGS1	-286,-431
chr3:111311962-111312889	chr3	+	111312027	111312873	True	NM_024508,NM_198196	chr3,chr3	-,+	ZBED2,CD96	1343,-51152
chr6:168268404-168269601	chr6	+	168268404	168269444	True	NR_027906,NM_001040000	chr6,chr6	-,+	C6orf124,MLLT4	-40928,-40786
chr7:5252091-5253407	chr7	+	5252476	5253028	True	NM_001033520,NR_034163	chr7,chr7	+,-	WIPI2,ZNF890P	871,-68299
chr19:51889131-51889565	chr19	+	51889173	51889249	True	NM_001161748,NM_001193623,NR_033235,NM_030657	chr19,chr19,chr19,chr19	-,-,+,-	LIM2,LOC147646,LOC100129083,LIM2	2011,4629,29910,2011
chr10:51465415-51465716	chr10	+	51465429	51465491	True	NM_001077685,NM_002443	chr10,chr10	-,+	AGAP7,MSMB	20886,84061
chr12:8186515-8187113	chr12	+	8186536	8187052	True	NM_004054,NM_018416	chr12,chr12	-,+	C3AR1,FOXJ2	31953,-1228
chr14:21230968-21231890	chr14	+	21231075	21231734	True	NM_198232,NM_022360	chr14,chr14	-,+	RNASE1,EDDM3B	38875,4851
chr1:19613097-19613657	chr1	+	19613203	19613459	True	NM_012067,NR_037847,NM_001040125	chr1,chr1,chr1	-,-,+	AKR7A3,LOC100506730,PQLC2	1871,8821,25280
chr11:2920126-2920733	chr11	+	2920152	2920772	True	NM_183233,NM_007105,NM_002555	chr11,chr11,chr11	+,-,+	SLC22A18,SLC22A18AS,SLC22A18	178,4453,2739
chr9:33023878-33025023	chr9	+	33023877	33024764	True	NM_001539,NR_036577	chr9,chr9	+,-	DNAJA1,APTX	444,-22238
chr1:110196553-110197191	chr1	+	110196949	110197235	True	NM_000850,NM_147148,NR_024538,NM_005272	chr1,chr1,chr1,chr1	+,+,+,-	GSTM4,GSTM4,GSTM4,GNAT2	1462,1462,1462,-41244
chr5:153824646-153825307	chr5	+	153824651	153825086	True	NR_037897,NM_001131062,NM_024632,NR_024084,NM_001131063	chr5,chr5,chr5,chr5,chr5	-,+,+,+,+	FLJ38109,SAP30L,SAP30L,SAP30L,SAP30L	346,430,430,430,430
chr12:49488685-49489335	chr12	+	49488685	49489303	True	NM_021044,NM_005430	chr12,chr12	-,+	DHH,WNT1	-83,-116500
chr17:47573865-47574081	chr17	+	47573884	47574130	True	NM_002634,NM_002507	chr17,chr17	-,+	PHB,NGFR	-81642,-1280
chr13:50266081-50266288	chr13	+	50266151	50266215	True	NM_032565,NM_138450	chr13,chr13	-,+	EBPL,ARL11	-528,-63767
chrX:46617887-46618156	chrX	+	46617950	46618194	True	NM_032591,NM_006915	chrX,chrX	-,+	SLC9A7,RP2	328,78152
chr9:132221381-132221711	chr9	+	132221439	132221757	True	NM_199350,NM_001012715	chr9,chr9	-,+	C9orf50,C9orf106	161348,-138195
chr19:18313292-18313559	chr19	+	18313326	18313526	True	NM_002866,NM_032683	chr19,chr19	-,+	RAB3A,MPV17L2	1398,-9337
chr7:100198559-100198801	chr7	+	100198566	100198758	True	NM_002319,NM_002593	chr7,chr7	-,+	LRCH4,PCOLCE	-14790,1123
chr1:178058643-178058868	chr1	+	178058699	178058872	True	NR_027982,NM_170692	chr1,chr1	-,+	LOC100302401,RASAL2	4307,3991
chr1:52497444-52498500	chr1	+	52497444	52498488	True	NM_001136497,NM_138417	chr1,chr1	+,-	BTF3L4,KTI12	23368,1034
chr3:68961351-68961801	chr3	+	68961403	68961821	True	NM_006407,NM_001005527	chr3,chr3	+,-	ARL6IP5,FAM19A4	172268,19940
chr7:141489908-141490497	chr7	+	141489913	141490517	True	NM_018980,NM_001008270	chr7,chr7	+,-	TAS2R5,PRSS37	53,50754
chr1:205710350-205711672	chr1	+	205710668	205711486	True	NM_022731,NM_181644	chr1,chr1	-,+	NUCKS1,MFSD4	7948,-172612
chr12:69633281-69633533	chr12	+	69633432	69633504	True	NM_007007,NR_031692	chr12,chr12	+,-	CPSF6,MIR1279	-166,33544
chr17:46608872-46609777	chr17	+	46609192	46609791	True	NM_002144,NR_033201	chr17,chr17	-,+	HOXB1,LOC404266	-920,58031
chr7:31729188-31730873	chr7	+	31729428	31730843	True	NM_022728,NM_006658,NM_001145123	chr7,chr7,chr7	-,+,+	NEUROD6,C7orf16,C7orf16	-348890,-2850,-2850
chr19:16608051-16608453	chr19	+	16608053	16608501	True	NM_145046,NM_032207	chr19,chr19	-,+	CALR3,C19orf44	-1050,-905
chr5:140095700-140096288	chr5	+	140095826	140096105	True	NR_026705,NR_026704,NM_002109,NR_026703	chr5,chr5,chr5,chr5	+,+,-,+	VTRNA1-3,VTRNA1-2,HARS,VTRNA1-1	9638,2405,-24855,-5020
chr15:51648326-51649884	chr15	+	51648512	51649735	True	NM_181789,NM_031226	chr15,chr15	+,-	GLDN,CYP19A1	-14850,-17717
chr20:3022002-3022923	chr20	+	3022176	3022908	True	NM_001501,NM_178331,NM_000490,NM_178332,NM_030811	chr20,chr20,chr20,chr20,chr20	+,+,-,+,+	GNRH2,GNRH2,AVP,GNRH2,MRPS26	1359,1359,42518,1359,3766
chr1:149224737-149225824	chr1	+	149224744	149225652	True	NM_001024599,NR_027002	chr1,chr1	-,+	HIST2H2BF,LOC388692	173633,53823
chr18:72057769-72059093	chr18	+	72057864	72059085	True	NM_001044369,NM_001174123	chr18,chr18	-,+	FAM69C,DKFZP781G0119	65481,-74805
chr6:127439797-127440006	chr6	+	127439800	127440054	True	NM_032784,NM_001139510	chr6,chr6	+,-	RSPO3,ECHDC1	1,223548
chr4:2010093-2010343	chr4	+	2010122	2010261	True	NM_005663,NM_001168243	chr4,chr4	-,+	WHSC2,C4orf48	748,33458
chr10:103871462-103873438	chr10	+	103871645	103873481	True	NM_001113407,NM_015062,NM_003893	chr10,chr10,chr10	-,+,-	LDB1,PPRC1,LDB1	6779,19305,1292
chr17:4696574-4697251	chr17	+	4696989	4697071	True	NM_002798,NM_001014985,NM_001144939,NM_001144941,NM_001144940,NM_182566	chr17,chr17,chr17,chr17,chr17,chr17	+,+,-,-,-,-	PSMB6,GLTPD2,VMO1,VMO1,VMO1,VMO1	2385,-4796,-7260,-7260,-7260,-7260
chr6:2747670-2748643	chr6	+	2747865	2748633	True	NM_001012418,NM_020135	chr6,chr6	-,+	MYLK4,WRNIP1	2571,17032
chr11:68450891-68451375	chr11	+	68450959	68451311	True	NM_015973,NM_004923	chr11,chr11	+,-	GAL,MTL5	671,67727
chr14:92137269-92138286	chr14	+	92137353	92137646	True	NM_024764,NM_017437	chr14,chr14	-,+	CATSPERB,CPSF2	60826,450651
chr1:114691956-114693141	chr1	+	114692118	114693147	True	NM_205848,NM_020190	chr1,chr1	-,+	SYT6,OLFML3	3376,-170139
chr7:142643771-142644728	chr7	+	142643805	142644643	True	NM_019841,NM_178829	chr7,chr7	-,+	TRPV5,C7orf34	-12985,-7253
chr9:34653118-34654926	chr9	+	34653147	34654789	True	NM_147162,NM_001142784,NM_000155,NM_004512,NM_006664	chr9,chr9,chr9,chr9,chr9	+,+,+,+,-	IL11RA,IL11RA,GALT,IL11RA,CCL27	-216,-1016,-6563,-216,7950
chr17:36501258-36501612	chr17	+	36501418	36501535	True	NM_001004334,NM_014598	chr17,chr17	-,+	GPR179,SOCS7	-1725,6471
chr1:207089098-207090752	chr1	+	207089117	207090755	True	NM_005449,NM_001142473,NM_006850,NM_001193338	chr1,chr1,chr1,chr1	-,-,+,-	FAIM3,FAIM3,IL24,FAIM3	4673,4673,-18380,4530
chr21:15350808-15351150	chr18	-	14180454	14180505	True	NR_026756,NM_145287	chr18,chr18	+,-	LOC284233,ZNF519	156916,-47965
chr6:88853766-88854000	chr6	+	88853827	88854019	True	NM_033181,NM_030960,NM_001160260	chr6,chr6,chr6	-,+,-	CNR1,SPACA1,CNR1	1087,-96371,6913
chr17:79846829-79847777	chr17	+	79847112	79847720	True	NM_016476,NM_005782,NM_001002249,NM_001002248,NM_001002247,NM_001002246,NM_001002245,NM_001002244	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,-,+,+,+,+,+,+	ANAPC11,THOC4,ANAPC11,ANAPC11,ANAPC11,ANAPC11,ANAPC11,ANAPC11	1878,1792,2097,1878,1878,1878,1878,1878
chr17:29889492-29890275	chr17	+	29889605	29890013	True	NR_029710,NM_014210	chr17,chr17	+,-	MIR193A,EVI2A	-2641,-240838
chrX:70366668-70366944	chrX	+	70366698	70366974	True	NM_001166660,NM_181303,NM_018977,NM_000206	chrX,chrX,chrX,chrX	+,+,+,-	NLGN3,NLGN3,NLGN3,IL2RG	-2069,-2069,-2069,-35217
chr1:226076454-226076695	chr1	+	226076505	226076667	True	NM_020997,NM_000120,NM_014698	chr1,chr1,chr1	-,+,-	LEFTY1,EPHX1,TMEM63A	229,-63554,-6085
chr5:169713725-169714978	chr5	+	169713853	169714988	True	NM_005565,NR_026945	chr5,chr5	-,+	LCP2,LOC257358	9884,43446
chr8:37344281-37344499	chr8	+	37344283	37344531	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	208769,261083
chr17:48712586-48712824	chr17	+	48712615	48712873	True	NM_052855,NM_001144070,NM_003786	chr17,chr17,chr17	-,+,+	ANKRD40,ABCC3,ABCC3	72447,-448,-448
chr8:12662164-12664140	chr8	+	12662442	12664118	True	NR_015383,NR_037495	chr8,chr8	-,+	LOC340357,MIR3926-2	4842,-77747
chr3:111851627-111852956	chr3	+	111851652	111852944	True	NR_030292,NM_152785,NM_001190259,NM_001190260	chr3,chr3,chr3,chr3	+,-,-,-	MIR567,GCET2,GCET2,GCET2	-20057,-50,-50,-50
chr3:189842116-189843820	chr3	+	189842220	189843783	True	NM_001134418,NM_006580,NM_018192	chr3,chr3,chr3	-,+,-	LEPREL1,CLDN16,LEPREL1	-1994,261877,-3312
chr22:41492916-41494466	chr22	+	41492943	41494316	True	NM_138481,NM_001429,NR_031694	chr22,chr22,chr22	-,+,+	CHADL,EP300,MIR1281	142678,-4388,-4485
chr6:89673264-89673511	chr6	+	89673289	89673559	True	NM_006813,NM_003800	chr6,chr6	+,-	PNRC1,RNGTT	116869,-43
chr1:145208992-145209471	chr1	+	145209089	145209249	True	NM_203458,NM_022359	chr1,chr1	+,-	NOTCH2NL,PDE4DIP	-29,-132903
chr1:145208992-145209471	chr1	-	120612134	120612185	False	NM_001200001,NM_024408,NM_001100910	chr1,chr1,chr1	-,-,+	NOTCH2,NOTCH2,FAM72B	183,183,226819
chr21:11170066-11170406	chr21	+	11170121	11170252	True	NM_001187,NR_037458	chr21,chr21	-,+	BAGE,MIR3687	-71184,-1343970
chr6:110734519-110735218	chr6	+	110734533	110734951	True	NM_004032,NM_003649,NM_015891	chr6,chr6,chr6	-,-,+	DDO,DDO,CDC40	1852,1852,-232960
chr1:149375349-149375947	chr1	+	149375359	149375798	True	NR_027484,NM_001024599	chr1,chr1	+,-	FCGR1C,HIST2H2BF	-6116,23482
chr1:149375349-149375947	chr1	-	120929492	120929931	False	NM_001004340,NR_027337,NM_001017986	chr1,chr1,chr1	-,+,-	FCGR1B,HIST2H2BA,FCGR1B	6063,-23510,6063
chr1:149375349-149375947	chr1	+	149760280	149760719	False	NM_001161334,NM_000566	chr1,chr1	-,+	HIST2H2BF,FCGR1A	23260,-6081
chr2:201465656-201466578	chr2	+	201465711	201466331	True	NM_001159,NM_152387	chr2,chr2	+,-	AOX1,KCTD18	-15040,-90919
chr12:56072427-56073287	chr12	+	56072550	56073110	True	NM_001144996,NM_152637	chr12,chr12	-,+	ITGA7,METTL7B	28634,2219
chr1:110091311-110091576	chr1	+	110091351	110091527	True	NM_006496,NM_031936,NM_020703	chr1,chr1,chr1	+,+,-	GNAI3,GPR61,AMIGO1	-216,-8908,-39015
chr20:38821019-38821843	chr20	+	38821198	38821635	True	NM_003286,NM_005461	chr20,chr20	+,-	TOP1,MAFB	835826,496292
chr2:231900704-231901028	chr2	+	231900742	231901018	True	NR_033879,NM_001144994	chr2,chr2	-,+	LOC348761,C2orf72	-39995,1262
chr6:111435082-111436570	chr6	+	111435214	111436307	True	NM_018593,NR_002932	chr6,chr6	+,-	SLC16A10,GSTM2P1	-26485,-66457
chr13:61067345-61067650	chr13	+	61067380	61067524	True	NM_001042517,NM_001146070	chr13,chr13	-,+	DIAPH3,TDRD3	-329261,-96010
chr10:52840554-52842240	chr10	+	52840566	52842182	True	NM_006258,NM_138933	chr10,chr10	+,-	PRKG1,A1CF	-6389,-195131
chr6:21595341-21595614	chr6	+	21595343	21595663	True	NM_003107,NR_034143	chr6,chr6	+,-	SOX4,LOC729177	-1422,551809
chr9:140446729-140447211	chr9	+	140446798	140447238	True	NM_032477,NM_152286,NM_001098537	chr9,chr9,chr9	+,-,-	MRPL41,PNPLA7,PNPLA7	-540,-1812,-1812
chr11:13300663-13301001	chr11	+	13300665	13301032	True	NM_001030273,NM_001030272,NM_001178,NM_032320	chr11,chr11,chr11,chr11	+,+,+,-	ARNTL,ARNTL,ARNTL,BTBD10	-1391,-1391,-1391,183863
chr4:38802658-38803537	chr4	+	38802696	38803362	True	NM_003263,NM_138389	chr4,chr4	-,+	TLR1,FAM114A1	3100,65991
chr9:90501248-90501482	chr9	+	90501276	90501518	True	NM_001039803,NM_178828	chr9,chr9	-,+	CDK20,C9orf79	88227,-3555
chr11:108205550-108206178	chr11	+	108205549	108206201	True	NM_000051,NM_002519	chr11,chr11	+,-	ATM,NPAT	-112046,-112184
chr11:77732266-77733842	chr11	+	77732395	77733549	True	NM_023930,NM_003251	chr11,chr11	-,+	KCTD14,THRSP	821,41357
chr6:53412375-53412844	chr6	+	53412388	53412760	True	NM_018214,NM_001498,NM_001197115	chr6,chr6,chr6	+,-,-	LRRC1,GCLC,GCLC	247017,-2461,-2461
chr12:1102789-1103982	chr12	+	1103266	1103907	True	NM_134424,NR_027946,NM_178039,NR_027948,NR_027949,NM_178040	chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,+,+,+	RAD52,ERC1,ERC1,ERC1,ERC1,ERC1	-44403,-2922,-2922,-2922,-2922,-2922
chr3:99979068-99979820	chr3	+	99979150	99979864	True	NM_018309,NM_014820,NM_001199198	chr3,chr3,chr3	+,-,+	TBC1D23,TOMM70A,TBC1D23	121,140411,121
chr15:91500031-91500438	chr15	+	91500065	91500403	True	NM_033544,NM_001017919,NM_198527	chr15,chr15,chr15	+,+,-	RCCD1,RCCD1,HDDC3	-2010,-2010,-24291
chr2:180596582-180598364	chr2	+	180596669	180598094	True	NM_182678,NM_001113397	chr2,chr2	+,-	UBE2E3,ZNF385B	1247017,12736
chr1:40421325-40421821	chr1	+	40421466	40421814	True	NM_005376,NM_001136493,NM_032793	chr1,chr1,chr1	-,+,+	MYCL1,MFSD2A,MFSD2A	-53779,-733,-733
chr17:6896363-6897715	chr17	+	6896747	6897730	True	NM_000697,NR_029712	chr17,chr17	+,-	ALOX12,MIR195	1653,23352
chr15:41408853-41409818	chr15	+	41409063	41409522	True	NM_017553,NM_007236	chr15,chr15	-,+	INO80,CHP	-723,113914
chr14:79745186-79745577	chr14	+	79745315	79745575	True	NM_001007023,NM_001105250,NM_138970	chr14,chr14,chr14	-,+,+	DIO2,NRXN3,NRXN3	932318,78,78
chr2:191744352-191745043	chr2	+	191744427	191745016	True	NM_014905,NM_007315	chr2,chr2	+,-	GLS,STAT1	530,134017
chr14:96671046-96671287	chr14	+	96671119	96671305	True	NM_000623,NM_018036	chr14,chr14	+,-	BDKRB2,ATG2B	-35,158423
chr1:202114743-202115439	chr1	+	202114831	202115341	True	NM_138795,NR_002930	chr1,chr1	-,+	ARL8A,PTPRVP	-965,21837
chr15:75291271-75292697	chr15	+	75291430	75292248	True	NM_001178111,NM_017793,NM_001178112,NR_033660,NM_138967	chr15,chr15,chr15,chr15,chr15	+,-,+,+,+	SCAMP5,RPP25,SCAMP5,SCAMP5,SCAMP5	-3605,-41655,-3605,-3605,-3605
chr3:39520411-39522175	chr3	+	39520905	39522162	True	NM_001171174,NR_003090	chr3,chr3	-,+	CX3CR1,MOBP	-197679,-11898
chr4:821625-822679	chr4	+	821704	822579	True	NM_032326,NM_006651	chr4,chr4	+,-	TMEM175,CPLX1	103682,-1759
chr19:58489950-58491924	chr19	+	58490024	58491488	True	NR_036508,NM_152474	chr19,chr19	+,-	LOC100128398,C19orf18	22773,-4122
chr6:83759464-83761225	chr6	+	83759463	83761240	True	NM_001199942,NM_198920	chr6,chr6	+,-	DOPEY1,UBE2CBP	16144,14362
chr22:19006487-19006742	chr22	+	19006496	19006640	True	NR_024157,NR_026651,NR_024159	chr22,chr22,chr22	-,+,+	DGCR11,DGCR10,DGCR9	29298,3496,-1200
chr6:31461650-31461977	chr6_qbl_hap6	+	2755452	2755512	False	NM_005931,NR_003140	chr6_qbl_hap6,chr6_qbl_hap6	+,-	MICB,SNORD117	4061,42444
chr6:31461650-31461977	chr6	+	31461752	31461812	True	NM_005931,NR_003140	chr6,chr6	+,-	MICB,SNORD117	4042,42464
chr6:31461650-31461977	chr6_ssto_hap7	+	2792550	2792610	False	NM_005931,NR_003140	chr6_ssto_hap7,chr6_ssto_hap7	+,-	MICB,SNORD117	4060,42471
chr6:31461650-31461977	chr6_apd_hap1	+	2776459	2776519	False	NM_005931,NR_003140	chr6_apd_hap1,chr6_apd_hap1	+,-	MICB,SNORD117	4042,42445
chr11:66385491-66385987	chr11	+	66385502	66386008	True	NM_018219,NM_001198845,NM_006328,NM_001198846,NM_001198836,NM_001198837	chr11,chr11,chr11,chr11,chr11,chr11	-,+,+,+,+,+	CCDC87,RBM14-RBM4,RBM14,RBM14-RBM4,RBM14,RBM14	-24948,-1506,-1506,-1506,-1506,-1506
chr6:159587939-159588242	chr6	+	159588001	159588279	True	NM_032532,NM_138810	chr6,chr6	+,-	FNDC1,TAGAP	2149,-121817
chr6:38564499-38564797	chr6	+	38564690	38564849	True	NM_152733,NM_001172418,NM_001371	chr6,chr6,chr6	-,-,+	BTBD9,BTBD9,DNAH8	-847,-847,125702
chr5:10581564-10583059	chr5	+	10581652	10583106	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-17269,178331
chr13:96206769-96207463	chr13	+	96206833	96207212	True	NM_006984,NM_014934	chr13,chr13	+,-	CLDN10,DZIP1	-1937,89806
chr22:36651736-36653287	chr22	+	36652330	36653263	True	NM_145637,NM_145343,NM_001136540,NM_001136541,NM_003661	chr22,chr22,chr22,chr22,chr22	-,+,+,+,+	APOL2,APOL1,APOL1,APOL1,APOL1	-16330,-3264,-3264,-3264,-3264
chr19:46195653-46195968	chr19	+	46195654	46195968	True	NM_177542,NM_001163377,NM_017659,NM_004597	chr19,chr19,chr19,chr19	-,+,+,-	SNRPD2,QPCTL,QPCTL,SNRPD2	-211,-6,-6,-211
chr12:52602936-52603565	chr12	+	52602950	52603248	True	NM_182507,NR_027358	chr12,chr12	-,+	KRT80,LOC283404	-17166,1465
chr9:130921884-130922287	chr9	+	130922246	130922312	True	NR_027812,NM_024112	chr9,chr9	-,+	PTGES2,C9orf16	-31534,226
chr10:134145656-134145938	chr10	+	134145664	134145934	True	NR_026559,NM_030626,NM_173575,NM_001143757,NM_001143759,NM_001143758	chr10,chr10,chr10,chr10,chr10,chr10	+,+,-,+,+,+	LRRC27,LRRC27,STK32C,LRRC27,LRRC27,LRRC27	4676,-101,-24187,26,-101,-101
chr19:56049189-56049466	chr19	+	56049262	56049488	True	NM_001144950,NM_001199824,NM_001101401	chr19,chr19,chr19	+,-,-	SSC5D,LOC100130827,SBK2	-49443,7471,-827
chr4:139995768-139996741	chr4	+	139996114	139996592	True	NM_006874,NM_012118	chr4,chr4	-,+	ELF2,CCRN4L	9115,-59231
chr13:25668390-25668912	chr13	+	25668445	25668714	True	NM_152704,NM_030979	chr13,chr13	-,+	FAM123A,PABPC3	77194,1561
chr1:35260524-35261250	chr1	+	35260564	35261270	True	NM_001164824,NM_002060	chr1,chr1	-,+	C1orf212,GJA4	63426,-2016
chr8:124253625-124253904	chr8	+	124253708	124253846	True	NM_032847,NM_207006	chr8,chr8	-,+	C8orf76,FAM83A	-70,-59007
chr20:10652189-10652466	chr20	+	10652306	10652462	True	NM_001009608,NM_000214	chr20,chr20	+,-	C20orf94,JAG1	-236406,2282
chr1:33210617-33211081	chr1	+	33210787	33210851	True	NM_020888,NM_030786	chr1,chr1	+,-	KIAA1522,SYNC	-3327,-42426
chr9:36036475-36036816	chr9	+	36036488	36036798	True	NM_021111,NM_019897	chr9,chr9	+,-	RECK,OR2S2	111,-78337
chr19:48896234-48896701	chr19	+	48896332	48896722	True	NM_006801,NM_000836	chr19,chr19	-,+	KDELR1,GRIN2D	-1522,1409
chr3:161084682-161085183	chr3	+	161085050	161085227	True	NM_001080440,NM_001040100	chr3,chr3	+,-	OTOL1,C3orf57	129368,4695
chr10:126716112-126716585	chr10	+	126716281	126716539	True	NM_022802,NM_017580,NR_036178	chr10,chr10,chr10	-,+,-	CTBP2,ZRANB1,MIR4296	-6,-85640,4950
chr17:79009672-79010005	chr17	+	79009725	79009961	True	NM_001144888,NR_026857,NM_017450,NM_017451,NM_006340	chr17,chr17,chr17,chr17,chr17	+,-,+,+,+	BAIAP2,FLJ90757,BAIAP2,BAIAP2,BAIAP2	-829,-1206,-829,-829,-829
chrX:48898751-48899093	chrX	+	48898761	48899103	True	NM_001163322,NM_006521	chrX,chrX	+,-	CCDC120,TFE3	17412,1937
chr15:77572402-77573371	chr15	+	77572800	77573224	True	NM_018200,NM_024776	chr15,chr15	+,-	HMG20A,PEAK1	140018,4166
chr5:99389861-99390137	chr5	+	99389890	99390135	True	NM_198507,NR_027503	chr5,chr5	+,-	FAM174A,LOC100133050	480988,333880
chr14:105887782-105888111	chr14	+	105887783	105888125	True	NM_004689,NM_001203258,NM_001519	chr14,chr14,chr14	+,+,-	MTA1,MTA1,BRF1	-1648,-1648,-120454
chr1:200588772-200589114	chr1	+	200588783	200589101	True	NM_014875,NM_203459	chr1,chr1	-,+	KIF14,CAMSAP1L1	817,119584
chr10:52500185-52501031	chr10	+	52500292	52501064	True	NM_147156,NM_001079516	chr10,chr10	-,+	SGMS1,ASAH2B	-116555,-635
chr20:38783232-38784716	chr20	+	38783408	38784562	True	NM_003286,NM_005461	chr20,chr20	+,-	TOP1,MAFB	872899,533366
chr10:95327065-95327598	chr10	+	95327115	95327511	True	NM_001195755,NM_181745,NM_006744	chr10,chr10,chr10	+,+,-	O3FAR1,O3FAR1,RBP4	-757,-757,33532
chr10:129915093-129915753	chr10	+	129915253	129915774	True	NM_130435,NM_002417,NM_001145966	chr10,chr10,chr10	+,-,-	PTPRE,MKI67,MKI67	-69501,8746,8746
chr22:44568939-44569691	chr22	+	44569176	44569606	True	NR_024426,NR_024427,NM_022141,NM_001099294,NM_001137605,NM_001137606,NR_024428	chr22,chr22,chr22,chr22,chr22,chr22,chr22	+,+,+,-,+,+,+	PARVG,PARVG,PARVG,KIAA1644,PARVG,PARVG,PARVG	7163,-391,7163,139175,-391,7650,7609
chr7:151216816-151217126	chr7	+	151216941	151217174	True	NM_005614,NR_034013	chr7,chr7	-,+	RHEB,LOC100131176	-17,-110670
chr9:138452860-138453423	chr9	+	138452922	138453218	True	NM_144654,NM_002571,NM_001018049	chr9,chr9,chr9	-,+,+	C9orf116,PAEP,PAEP	-61161,385,385
chr2:168670991-168672192	chr2	+	168671282	168672234	True	NM_020981,NM_013233	chr2,chr2	+,-	B3GALT1,STK39	2947,431921
chr12:6981012-6981461	chr12	+	6981042	6981496	True	NM_032641,NM_000365,NM_001146316,NR_027483,NM_001159287	chr12,chr12,chr12,chr12,chr12	-,+,-,+,+	SPSB2,TPI1,SPSB2,TPI1,TPI1	1075,-4400,1003,-3815,-4509
chr4:83804904-83805230	chr4	+	83804997	83805138	True	NM_001191049,NM_024672,NM_014933,NM_016211,NM_001077206,NM_001077207,NM_001077208	chr4,chr4,chr4,chr4,chr4,chr4,chr4	-,+,-,-,-,-,-	SEC31A,THAP9,SEC31A,SEC31A,SEC31A,SEC31A,SEC31A	7256,16698,7340,7333,7333,7333,7333
chr20:32318008-32318404	chr20	+	32318057	32318141	True	NM_032819,NM_007238,NM_183397	chr20,chr20,chr20	+,-,-	ZNF341,PXMP4,PXMP4	1666,-9921,-9921
chr3:158390421-158391459	chr3	+	158390598	158391284	True	NM_024996,NM_020169	chr3,chr3	+,-	GFM1,LXN	-28334,-116
chr20:23339255-23340499	chr20	+	23339254	23340368	True	NM_022482,NM_022080,NM_013248	chr20,chr20,chr20	+,-,+	GZF1,NAPB,NXT1	4652,61848,-7939
chr19:43892589-43893105	chr19	+	43892784	43892866	True	NM_031451,NM_014400	chr19,chr19	+,-	TEX101,LYPD3	-72,77015
chr7:100199542-100199762	chr7	+	100199738	100199810	True	NM_002319,NM_001040097,NM_002593	chr7,chr7,chr7	-,+,+	LRCH4,MOSPD3,PCOLCE	-15962,9914,71
chr19:18507795-18508012	chr19	+	18507844	18508028	True	NM_145256,NR_036156	chr19,chr19	-,+	LRRC25,MIR3189	437,-10523
chr8:120884497-120885037	chr8	+	120884548	120884922	True	NM_024094,NM_022783	chr8,chr8	-,+	DSCC1,DEPTOR	-16378,977
chr9:135456337-135456558	chr9	+	135456400	135456552	True	NM_022779,NM_020064	chr9,chr9	-,+	DDX31,BARHL1	89286,1440
chr1:86622003-86622328	chr1	+	86622037	86622327	True	NM_152890,NM_006536	chr1,chr1	-,+	COL24A1,CLCA2	-2,267441
chr8:37335524-37336975	chr8	+	37335610	37336593	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	216707,269034
chr17:18546758-18547790	chr17	+	18546767	18547719	True	NM_001037330,NM_001039397	chr17,chr17	+,-	TRIM16L,TBC1D28	77682,71
chr17:18546758-18547790	chr17	-	15635597	15636533	False	NM_006470,NM_178571	chr17,chr17	-,+	TRIM16,TBC1D26	-49404,-57
chr15:78285898-78286546	chr15	+	78285910	78286590	True	NM_001101404,NR_026998	chr15,chr15	+,-	SH2D7,LOC91450	98336,27
chr17:56770636-56771994	chr17	+	56770746	56771787	True	NM_001201457,NM_198393,NM_031272,NM_058216,NM_002876	chr17,chr17,chr17,chr17,chr17	-,-,-,+,+	TEX14,TEX14,TEX14,RAD51C,RAD51C	-1330,-1330,-1330,-834,-834
chr16:3116909-3117150	chr16	+	3117139	3117199	True	NM_032805,NM_004221,NM_001012718,NM_001012636,NM_001012635,NM_001012634,NM_001012633,NM_001012632,NM_001012631	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	-,+,+,+,+,+,+,+,+	ZSCAN10,IL32,IL32,IL32,IL32,IL32,IL32,IL32,IL32	25712,-1877,-1877,-1405,-1578,-1551,-1877,-1527,-1877
chr7:137002987-137004060	chr7	+	137003098	137004098	True	NM_002825,NR_030165	chr7,chr7	-,+	PTN,MIR490	24506,-415235
chr19:3357891-3358265	chr19	+	3357928	3358226	True	NM_005597,NM_001136503,NM_205843	chr19,chr19,chr19	+,-,+	NFIC,C19orf77,NFIC	8346,122364,1389
chr16:23768888-23769517	chr16	+	23768895	23769515	True	NM_033266,NM_022097	chr16,chr16	-,+	ERN2,CHP2	-44074,-2998
chr18:2579719-2580678	chr18	+	2579815	2580621	True	NM_006101,NM_022840	chr18,chr18	+,-	NDC80,METTL4	-8361,-8326
chr15:22832781-22833104	chr15	+	22832966	22833056	True	NR_027407,NM_001102610,NM_052903	chr15,chr15,chr15	-,+,+	GOLGA8DP,TUBGCP5,TUBGCP5	-117238,338,338
chr8:67623660-67624560	chr8	+	67623885	67624443	True	NM_001033578,NM_025054	chr8,chr8	+,-	SGK3,VCPIP1	209,-44433
chr18:20738342-20739088	chr18	+	20738394	20738914	True	NM_138375,NM_032933	chr18,chr18	+,-	CABLES1,C18orf45	-2656,279061
chr15:78441564-78441787	chr15	+	78441687	78441805	True	NM_006383,NM_005530	chr15,chr15	-,+	CIB2,IDH3A	-17809,-19
chr2:219221330-219221584	chr2	+	219221420	219221624	True	NM_198559,NM_022152	chr2,chr2	+,-	C2orf62,TMBIM1	18,-64140
chr9:2274816-2275318	chr9	+	2274820	2275294	True	NM_139045,NR_015375	chr9,chr9	+,-	SMARCA2,FLJ35024	-259530,347129
chr22:41349287-41350580	chr22	+	41349344	41350590	True	NM_014248,NM_145174	chr22,chr22	+,-	RBX1,DNAJB7	-2055,-91214
chr18:77156638-77156877	chr18	+	77156652	77156926	True	NM_006162,NM_172388,NM_172389,NM_172387,NM_001146343,NM_172390	chr18,chr18,chr18,chr18,chr18,chr18	+,+,+,+,-,+	NFATC1,NFATC1,NFATC1,NFATC1,PQLC1,NFATC1	-931,-931,3399,3399,554777,-931
chr16:31714566-31714820	chr16	+	31714587	31714801	True	NR_027011,NR_024034,NM_001130913	chr16,chr16,chr16	-,+,+	CSDAP1,KIAA0664L3,ZNF720	-133742,-2704,9748
chr9:140148837-140149146	chr9	+	140148899	140149086	True	NM_015456,NM_001004353,NM_001001710	chr9,chr9,chr9	+,+,-	COBRA1,C9orf173,FAM166A	672,-3220,-6677
chr2:18056411-18057683	chr2	+	18056629	18057631	True	NM_024624,NM_002252	chr2,chr2	-,+	SMC6,KCNS3	-121533,2313
chr5:41068807-41070098	chr5	+	41068894	41070136	True	NM_000587,NM_173489	chr5,chr5	+,-	C7,HEATR7B2	-159348,1358
chr1:180991198-180991747	chr1	+	180991279	180991787	True	NM_001194999,NM_005819	chr1,chr1	+,-	MR1,STX6	10773,309
chr4:140377110-140378611	chr4	+	140377190	140378651	True	NM_031296,NM_030648	chr4,chr4	+,-	RAB33B,SETD7	-2283,98976
chr4:3956964-3957170	chr4	+	3957060	3957158	True	NM_000683,NR_024253	chr4,chr4	+,-	ADRA2C,LOC348926	-188815,40
chr20:62327514-62328032	chr20	+	62327560	62328016	True	NM_001134758,NM_003823	chr20,chr20	-,+	ARFRP1,TNFRSF6B	11389,-13
chr11:3011318-3013048	chr11	+	3011368	3012745	True	NM_005969,NM_002555	chr11,chr11	-,+	NAP1L4,SLC22A18	912,-87921
chr9:115479157-115479857	chr9	+	115479309	115479872	True	NM_001012994,NM_021218	chr9,chr9	+,-	SNX30,C9orf80	33261,565
chr2:230915718-230916743	chr2	+	230915734	230916572	True	NM_174899,NM_152527	chr2,chr2	+,-	FBXO36,SLC16A14	-128578,17197
chr2:23656681-23656908	chr2	+	23656801	23656871	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	493113,-48561
chr22:18508213-18509856	chr22	+	18508277	18509891	True	NM_001136004,NM_015241,NR_024417,NM_001122731	chr22,chr22,chr22,chr22	-,-,+,-	MICAL3,MICAL3,FLJ41941,MICAL3	-952,-952,2259,-952
chr11:1940622-1940854	chr11	+	1940647	1940903	True	NM_001042782,NM_001042780,NM_001042781,NR_036185,NM_006757	chr11,chr11,chr11,chr11,chr11	+,+,+,-,+	TNNT3,TNNT3,TNNT3,MIR4298,TNNT3	35,35,35,-59881,35
chr9:139963226-139963489	chr9	+	139963251	139963443	True	NM_207309,NM_178448	chr9,chr9	+,-	UAP1L1,C9orf140	8509,1635
chr14:95048459-95048885	chr14	+	95048609	95048765	True	NM_173850,NM_000624	chr14,chr14	-,+	SERPINA12,SERPINA5	-64428,-929
chr16:50732506-50732929	chr16	+	50732537	50732825	True	NM_022162,NM_182854	chr16,chr16	+,-	NOD2,SNX20	-1538,-17273
chr17:19648733-19649417	chr17	+	19648740	19649354	True	NM_000382,NM_001135168,NM_001135167,NM_000691	chr17,chr17,chr17,chr17	+,-,-,-	ALDH3A2,ALDH3A1,ALDH3A1,ALDH3A1	-96727,32,-111,2442
chr3:46741763-46742378	chr3	+	46741819	46742405	True	NM_001190707,NM_147196,NR_033815,NM_147129	chr3,chr3,chr3,chr3	-,+,-,-	ALS2CL,TMIE,ALS2CL,ALS2CL	-6673,417,-6625,-6625
chr19:59065555-59065764	chr19	+	59065554	59065764	True	NM_198426,NR_027334,NM_003969,NM_014453,NM_005762	chr19,chr19,chr19,chr19,chr19	-,+,-,-,+	CHMP2A,LOC100131691,UBE2M,CHMP2A,TRIM28	641,4788,4629,772,-9769
chr17:68089609-68091599	chr17	+	68089996	68091501	True	NM_170742,NR_036534	chr17,chr17	+,-	KCNJ16,FLJ36644	9493,74093
chr9:34958469-34958935	chr9	+	34958610	34958974	True	NM_007126,NM_015297	chr9,chr9	-,+	VCP,KIAA1045	113815,-469
chr19:55627755-55628005	chr19	+	55627847	55628045	True	NM_017607,NM_017729	chr19,chr19	-,+	PPP1R12C,EPS8L1	932,-36138
chr12:102271900-102272223	chr12	+	102271974	102272223	True	NM_018370,NM_024312	chr12,chr12	+,-	DRAM1,GNPTAB	-923,-47329
chr15:64126662-64128364	chr15	+	64126662	64128234	True	NM_003922,NM_203373	chr15,chr15	-,+	HERC1,FBXL22	-515,-237161
chr22:20256616-20256869	chr22	+	20256647	20256881	True	NM_023004,NR_026919	chr22,chr22	-,+	RTN4R,LOC150197	-831,-62843
chr22:20256616-20256869	chr22	-	18957065	18957149	False	NR_002733,NM_016335	chr22,chr22	+,-	DGCR5,PRODH	877,-32999
chr22:20256616-20256869	chr22	+	23745760	23745818	False	NR_033408,NR_003950	chr22,chr22	+,-	FBXW4P1,ZDHHC8P1	-140857,-961
chr17:1421515-1422471	chr17	+	1421655	1422509	True	NM_130766,NM_016532,NM_001135642,NR_028514	chr17,chr17,chr17,chr17	-,-,-,+	INPP5K,INPP5K,INPP5K,LOC100306951	-1473,-1473,-1473,-1493
chr19:19754504-19754718	chr19	+	19754504	19754658	True	NM_033204,NM_016573	chr19,chr19	+,-	ZNF101,GMIP	25004,-49
chr14:69447208-69447474	chr14	+	69447210	69447288	True	NM_001130004,NM_001193360,NM_001130005,NM_001102	chr14,chr14,chr14,chr14	-,+,-,-	ACTN1,EXD2,ACTN1,ACTN1	-1127,210905,-1127,-1127
chr9:84546039-84546300	chr9	+	84546086	84546320	True	NM_001145197,NM_005077	chr9,chr9	+,-	FAM75D4,TLE1	-2794,-242490
chr9:84546039-84546300	chr9	+	84561178	84561412	False	NM_005077,NM_207416	chr9,chr9	-,+	TLE1,FAM75D3	-257582,-2814
chr1:160118211-160119915	chr1	+	160118223	160119732	True	NM_144699,NM_052868	chr1,chr1	+,-	ATP1A4,IGSF8	1619,-49815
chr5:133863367-133863568	chr5	+	133863518	133863588	True	NM_001033503,NM_015288	chr5,chr5	-,+	SAR1B,PHF15	104995,-1771
chr1:95285355-95285630	chr1	+	95285382	95285664	True	NM_001114106,NM_152369,NM_001839	chr1,chr1,chr1	+,+,-	SLC44A3,SLC44A3,CNN3	236,435,107121
chr9:129883298-129883681	chr9	+	129883331	129883661	True	NM_032293,NM_012098	chr9,chr9	+,-	GARNL3,ANGPTL2	143094,1433
chr5:77941564-77943251	chr5	+	77941897	77943264	True	NM_004866,NM_005779	chr5,chr5	+,-	SCAMP1,LHFPL2	-285609,1435
chr8:81774329-81775692	chr8	+	81774465	81775556	True	NM_001033723,NM_023929	chr8,chr8	-,+	ZNF704,ZBTB10	11514,-376076
chr15:83774086-83775098	chr15	+	83774245	83774705	True	NM_001144903,NM_023003,NM_025238	chr15,chr15,chr15	+,+,-	TM6SF1,TM6SF1,BTBD1	1618,1618,-38139
chr11:6290190-6291224	chr11	+	6290244	6291149	True	NM_176875,NM_032127	chr11,chr11	+,-	CCKBR,FAM160A2	-9329,-34303
chr19:17861741-17862128	chr19	+	17861997	17862131	True	NM_001161359,NM_001161358,NM_001080421,NM_015122,NM_001161357	chr19,chr19,chr19,chr19,chr19	+,+,-,+,+	FCHO1,FCHO1,UNC13A,FCHO1,FCHO1	154,-3521,-62989,154,-3521
chr3:114010559-114011431	chr3	+	114010770	114011401	True	NR_030293,NM_173799	chr3,chr3	-,+	MIR568,TIGIT	24065,1431
chr17:38927027-38927981	chr17	+	38927220	38927990	True	NM_181539,NM_001195387	chr17,chr17	-,+	KRT26,TMEM99	471,47353
chr7:128169155-128169532	chr7	+	128169209	128169293	True	NM_183243,NM_018396	chr7,chr7	-,+	IMPDH1,METTL2B	-119173,-52477
chr15:69745717-69746016	chr15	+	69745766	69745973	True	NR_030714,NM_213725,NM_001003	chr15,chr15,chr15	-,+,+	MIR629,RPLP1,RPLP1	625893,-658,-658
chr3:142162407-142163372	chr3	+	142162556	142163017	True	NM_019001,NM_001145319,NM_001042604	chr3,chr3,chr3	-,+,-	XRN1,PLS1,XRN1	3888,152211,3888
chr12:93092223-93092953	chr12	+	93092239	93092789	True	NM_001178097,NM_001037671,NM_003566	chr12,chr12,chr12	+,+,-	C12orf74,C12orf74,EEA1	3829,3829,230382
chr13:76352661-76354067	chr13	+	76352674	76353908	True	NM_203497,NM_015842	chr13,chr13	-,+	COMMD6,LMO7	-240683,-17929
chr6:167576214-167577327	chr6	+	167576304	167576886	True	NM_005299,NM_001145121	chr6,chr6	-,+	GPR31,TCP10L2	-4985,7194
chrX:153862083-153862383	chrX	+	153862153	153862290	True	NR_027401,NM_139250,NR_027402	chrX,chrX,chrX	-,+,-	NCRNA00204,CTAG1A,NCRNA00204B	-705,-48786,-705
chrX:153862083-153862383	chrX	-	153798636	153798773	False	NM_001042351,NR_027401,NR_027402	chrX,chrX,chrX	-,+,+	G6PD,NCRNA00204,NCRNA00204B	-22849,705,705
chr16:89770581-89771518	chr16	+	89770649	89771506	True	NR_036480,NM_152339	chr16,chr16	+,-	LOC100128881,SPATA2L	6757,-2528
chr10:25449563-25450632	chr10	+	25449614	25450290	True	NM_020752,NR_027333	chr10,chr10	+,-	GPR158,LOC100128811	13999,14975
chr10:75007173-75008349	chr10	+	75007235	75008382	True	NM_173348,NM_015190,NM_016065	chr10,chr10,chr10	+,-,-	FAM149B1,DNAJC9,MRPS16	-79409,-210,4119
chr5:114598631-114599341	chr5	+	114598706	114599388	True	NM_005023,NM_001284	chr5,chr5	-,+	PGGT1B,AP3S1	-137,578230
chr1:10530775-10531042	chr1	+	10530775	10530847	True	NM_213566,NM_004565,NM_004401	chr1,chr1,chr1	-,+,-	DFFA,PEX14,DFFA	1820,4155,1820
chr17:30478015-30478622	chr17	+	30478129	30478508	True	NM_001033566,NM_018307,NM_001033568,NR_002222	chr17,chr17,chr17,chr17	+,+,+,-	RHOT1,RHOT1,RHOT1,ARGFXP2	-8708,-8708,-8708,133
chr11:129011353-129012088	chr11	+	129011612	129012055	True	NM_001142685,NM_003658	chr11,chr11	-,+	ARHGAP32,BARX2	50100,233825
chr1:187538230-187538769	chr1	+	187538389	187538810	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-888830,-740421
chr5:173484823-173486690	chr5	+	173484831	173486691	True	NM_138369,NM_015980	chr5,chr5	-,+	BOD1,HMP19	-441165,-12158
chr3:97221306-97223186	chr3	+	97221347	97223097	True	NM_001042533,NM_173655	chr3,chr3	-,+	MINA,EPHA6	468177,-62914
chr1:116310984-116312404	chr1	+	116311034	116312384	True	NM_001232,NM_001172412	chr1,chr1	-,+	CASQ2,VANGL1	-122,-125835
chr14:21354720-21355113	chr14	+	21354920	21354990	True	NM_002935,NM_198235	chr14,chr14	+,-	RNASE3,RNASE1	4571,-83884
chr2:190632200-190633830	chr2	+	190632375	190633518	True	NM_022353,NM_000534	chr2,chr2	-,+	OSGEPL1,PMS1	-4451,15292
chr14:90724227-90725142	chr14	+	90724231	90725182	True	NM_017970,NM_002802	chr14,chr14	-,+	C14orf102,PSMC1	73156,-1395
chrX:33147487-33148762	chrX	+	33147817	33148451	True	NM_004010,NM_152631,NM_004009	chrX,chrX,chrX	-,+,-	DMD,FAM47B,DMD	-1273,1812461,-1272
chrX:22055139-22056534	chrX	+	22055372	22056548	True	NM_014332,NM_000444	chrX,chrX	-,+	SMPX,PHEX	-279142,-4510
chr5:173121739-173122089	chr5	+	173121767	173122125	True	NR_027109,NM_138369	chr5,chr5	+,-	LOC285593,BOD1	-115161,-78101
chr10:6104645-6105105	chr10	+	6104664	6105141	True	NM_032905,NM_000417	chr10,chr10	+,-	RBM17,IL2RA	25807,-331
chr4:164471356-164471703	chr4	+	164471473	164471750	True	NM_017923,NM_018352	chr4,chr4	-,+	MARCH1,C4orf43	63076,-55854
chr4:159942206-159943903	chr4	+	159942218	159943858	True	NM_152543,NM_014247	chr4,chr4	-,+	C4orf45,RAPGEF2	12525,245139
chr12:8787641-8789071	chr12	+	8787645	8788166	True	NM_020661,NM_020734	chr12,chr12	-,+	AICDA,RIMKLB	-22203,62351
chr6:8103014-8104645	chr6	+	8103054	8104438	True	NM_001135650,NR_027712,NR_037618,NM_004280	chr6,chr6,chr6,chr6	-,+,-,-	EEF1E1,PIP5K1P1,EEF1E1-MUTED,EEF1E1	-226,-116771,-226,-226
chr20:23434358-23436097	chr20	+	23434477	23436146	True	NM_130794,NM_138283,NM_080830	chr20,chr20,chr20	-,+,-	CST11,CSTL1,CST11	-995,-14206,-995
chr12:27920003-27920357	chr12	+	27920227	27920352	True	NM_001146221,NM_020782	chr12,chr12	-,+	LOC100287284,KLHDC5	3912,12834
chr20:33459475-33459826	chr20	+	33459503	33459827	True	NM_178026,NM_018677,NM_001076552,NR_028046	chr20,chr20,chr20,chr20	-,+,+,+	GGT7,ACSS2,ACSS2,ACSS2	884,4500,4500,2938
chr7:74353118-74353318	chr7	+	74353179	74353369	True	NM_001025202,NM_001145063	chr7,chr7	-,+	STAG3L2,GATSL1	-46448,25713
chr7:74353118-74353318	chr7	+	72543760	72543898	False	NR_003664,NR_003580	chr7,chr7	-,+	SPDYE8P,LOC100093631	-43451,25113
chr7:74353118-74353318	chr7	-	74893039	74893121	False	NM_001145064,NR_003664	chr7,chr7	-,+	GATSL2,SPDYE8P	-25698,43411
chr7:74353118-74353318	chr7	-	74678726	74678864	False	NM_001003795,NR_003580	chr7,chr7	+,-	GTF2IRD2B,LOC100093631	-170433,-25267
chr14:74958071-74958588	chr14	+	74958088	74958472	True	NM_194279,NM_006432	chr14,chr14	+,-	ISCA2,NPC2	1977,1662
chr19:14049292-14049516	chr19	+	14049319	14049495	True	NM_138353,NM_024825	chr19,chr19	+,-	DCAF15,PODNL1	13823,-30
chr7:99512523-99513046	chr7	+	99512847	99513074	True	NM_033091,NM_033017,NR_036679	chr7,chr7,chr7	-,-,+	TRIM4,TRIM4,AZGP1P1	4208,4208,65310
chr10:90360796-90362771	chr10	+	90361006	90362503	True	NM_001031709,NM_001010939	chr10,chr10	-,+	RNLS,LIPJ	-17924,-14538
chr20:4629944-4630448	chr20	+	4629959	4630406	True	NR_024267,NM_000311	chr20,chr20	-,+	PRNT,PRNP	90961,36390
chr21:45992487-45993278	chr21	+	45992558	45993142	True	NM_198694,NM_198687	chr21,chr21	-,+	KRTAP10-5,KRTAP10-4	7389,463
chr2:224894505-224895889	chr2	+	224894701	224895891	True	NM_022915,NM_001136530,NM_006216,NM_001136528	chr2,chr2,chr2,chr2	+,-,-,-	MRPL44,SERPINE2,SERPINE2,SERPINE2	-72643,7516,8195,8195
chr17:67199589-67200309	chr17	+	67199731	67200293	True	NM_080282,NM_002758	chr17,chr17	-,+	ABCA10,MAP2K6	40713,210544
chr5:139725267-139725538	chr5	+	139725385	139725543	True	NM_001945,NM_031467	chr5,chr5	-,+	HBEGF,SLC4A9	695,14243
chr17:61960925-61962072	chr17	+	61961389	61961835	True	NM_022556,NM_022557,NM_002059,NM_022558,NR_002947	chr17,chr17,chr17,chr17,chr17	-,-,-,-,+	GH2,GH2,GH2,GH2,TCAM1P	-2166,-2166,-2166,-2166,-27064
chr7:82073797-82074140	chr7	+	82073796	82074168	True	NM_000722,NM_001127444	chr7,chr7	-,+	CACNA2D1,CD36	-765,-1798085
chr4:44628838-44629493	chr4	+	44629118	44629515	True	NM_021927,NM_182592	chr4,chr4	+,-	GUF1,YIPF7	50917,24198
chr18:7568822-7569158	chr18	+	7568873	7569177	True	NM_005559,NM_002845,NM_001105244	chr18,chr18,chr18	-,+,+	LAMA1,PTPRM,PTPRM	-451060,-1610,-1610
chr9:129089659-129090541	chr9	+	129089995	129090523	True	NM_001006618,NM_001011703,NM_033446	chr9,chr9,chr9	-,+,+	MAPKAP1,FAM125B,FAM125B	-620482,-919,-919
chr2:68588993-68589403	chr2	+	68589164	68589430	True	NM_015463,NM_002664	chr2,chr2	-,+	CNRIP1,PLEK	-41981,2891
chr15:79235865-79236593	chr15	+	79235871	79236472	True	NM_004390,NM_206839	chr15,chr15	-,+	CTSH,MORF4L1	998,-70753
chr4:49273042-49273617	chr4	+	49273106	49273552	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-284892,-364291
chr4:49273042-49273617	chr4	-	49525711	49525761	False	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-537497,-616896
chr18:77905125-77905446	chr18	+	77905195	77905407	True	NM_032510,NR_028339	chr18,chr18	-,+	PARD6G,LOC100130522	100040,399
chr12:58087570-58088017	chr12	+	58087586	58087986	True	NM_006812,NM_001017958,NM_001122772,NM_001017957,NM_001017956	chr12,chr12,chr12,chr12,chr12	+,+,-,+,+	OS9,OS9,AGAP2,OS9,OS9	-29,-29,44093,-29,-29
chr20:18562432-18563897	chr20	+	18562514	18563577	True	NM_006606,NM_080820	chr20,chr20	-,+	RBBP9,DTD1	-84627,4978
chr17:77006026-77006508	chr17	+	77006057	77006453	True	NM_001159772,NM_001159773,NM_138793,NM_030968	chr17,chr17,chr17,chr17	-,-,-,+	CANT1,CANT1,CANT1,C1QTNF1	-158,-158,-158,13797
chr2:65220074-65220680	chr2	+	65220135	65220667	True	NR_036586,NM_003038,NM_001193493	chr2,chr2,chr2	-,+,+	LOC400958,SLC1A4,SLC1A4	-60554,-3691,-4607
chr14:52232258-52232702	chr14	+	52232588	52232748	True	NR_037676,NM_053064	chr14,chr14	-,+	C14orf82,GNG2	-114126,94301
chr1:154531730-154532144	chr1	+	154531860	154532180	True	NM_000748,NM_017582	chr1,chr1	+,-	CHRNB2,UBE2Q1	8076,-740
chr9:36077933-36079051	chr9	+	36078268	36078854	True	NM_021111,NM_019897	chr9,chr9	+,-	RECK,OR2S2	-41415,-120117
chr3:195448752-195449517	chr3	+	195448979	195449415	True	NM_001098516,NM_004532,NM_152673	chr3,chr3,chr3	+,-,+	MUC20,MUC4,MUC20	1682,89783,-1292
chr3:195448752-195449517	chr3	+	195343174	195343364	False	NM_001647,NR_003265	chr3,chr3	-,+	APOD,SDHAP2	-32098,41545
chr1:46669693-46670083	chr1	+	46669698	46670128	True	NM_001013615,NM_017739	chr1,chr1	+,-	C1orf190,POMGNT1	-743,-5577
chr6:11233340-11234016	chr6	+	11233452	11234052	True	NM_001135575,NM_182966,NM_006403	chr6,chr6,chr6	+,-,-	LOC221710,NEDD9,NEDD9	-139238,-537,-537
chr19:14135885-14136727	chr19	+	14136652	14136774	True	NM_004843,NM_002918,NM_080864	chr19,chr19,chr19	+,-,+	IL27RA,RFX1,RLN3	5487,-19518,2242
chr2:85828984-85829226	chr2	+	85828994	85829222	True	NR_033179,NM_016494,NM_001031738	chr2,chr2,chr2	-,+,-	TMEM150A,RNF181,TMEM150A	650,-6208,650
chr2:74705873-74706358	chr2	+	74706328	74706406	True	NM_053050,NM_032779,NR_027749,NM_022492	chr2,chr2,chr2,chr2	-,-,+,+	MRPL53,CCDC142,TTC31,TTC31	-6386,4001,3793,3793
chr1:203764741-203764947	chr1	+	203764747	203764940	True	NM_001174108,NM_014827,NR_027902	chr1,chr1,chr1	+,+,-	ZBED6,ZC3H11A,C1orf157	1710,-47,245503
chr17:8194818-8195221	chr17	+	8194859	8195099	True	NM_201520,NM_001177802,NM_016492,NM_001177801	chr17,chr17,chr17,chr17	-,+,+,+	SLC25A35,RANGRF,RANGRF,RANGRF	3121,-2941,-2941,-2941
chr2:55909762-55911521	chr2	+	55910063	55911273	True	NM_080667,NM_033109	chr2,chr2	+,-	CCDC104,PNPT1	-163384,9795
chr19:46233524-46233959	chr19	+	46233594	46233984	True	NM_001080469,NM_017659	chr19,chr19	-,+	FBXO46,QPCTL	217,-37904
chr3:45019277-45019670	chr3	+	45019276	45019669	True	NM_015004,NR_023353,NM_016598,NM_001135179	chr3,chr3,chr3,chr3	+,+,-,-	EXOSC7,EXOSC7,ZDHHC3,ZDHHC3	-1586,-1586,-1602,-1602
chr7:155088084-155088589	chr7	+	155088297	155088471	True	NM_001103176,NM_005542,NM_198337,NM_198336	chr7,chr7,chr7,chr7	-,+,+,+	CNPY1,INSIG1,INSIG1,INSIG1	238118,1014,1014,1014
chr14:59293159-59295077	chr14	+	59293522	59294842	True	NM_012460,NM_016651	chr14,chr14	-,+	TIMM9,DACT1	-399290,-188824
chr12:47477685-47479074	chr12	+	47478399	47478998	True	NM_181847,NM_138371,NM_001143668	chr12,chr12,chr12	-,+,-	AMIGO2,FAM113B,AMIGO2	-4665,131053,-4665
chr7:128285653-128287317	chr7	+	128286065	128286447	True	NR_024368,NM_001708	chr7,chr7	+,-	FLJ45340,OPN1SW	-4823,129447
chr1:25560487-25560991	chr1	+	25560538	25560784	True	NM_001127691,NM_207170,NM_015484	chr1,chr1,chr1	+,-,-	RHD,SYF2,SYF2	38196,-1525,-1525
chr6:109760717-109761460	chr6	+	109760849	109761427	True	NM_173672,NM_003080,NM_001111298	chr6,chr6,chr6	-,+,-	PPIL6,SMPD2,PPIL6	997,503,997
chr8:37731223-37731534	chr8	+	37731227	37731507	True	NM_018310,NM_032777	chr8,chr8	-,+	BRF2,GPR124	-23796,-76877
chr9:123814994-123816597	chr9	+	123815022	123816278	True	NM_007018,NM_001735	chr9,chr9	+,-	CEP110,C5	34295,-2468
chr1:43147457-43147706	chr1	+	43147488	43147628	True	NM_001123395,NM_004559	chr1,chr1	-,+	CLDN19,YBX1	58347,437
chr2:220302740-220304465	chr2	+	220302742	220304182	True	NM_012100,NM_005876	chr2,chr2	-,+	DNPEP,SPEG	-50080,-3093
chr19:49438928-49439669	chr19	+	49439363	49439647	True	NM_003323,NM_014475	chr19,chr19	-,+	TULP2,DHDH	-37367,-2475
chr8:91804062-91805111	chr8	+	91804183	91804908	True	NM_001146273,NM_022351	chr8,chr8	-,+	TMEM64,NECAB1	-146050,-313
chr3:48700359-48700634	chr3	+	48700388	48700654	True	NM_033629,NM_001407	chr3,chr3	+,-	TREX1,CELSR3	-193210,-40
chr14:23528398-23528953	chr14	+	23528434	23528866	True	NM_144985,NM_022478,NM_001099780	chr14,chr14,chr14	-,-,+	CDH24,CDH24,PSMB11	-1687,-1687,-17109
chr1:154157311-154157702	chr1	+	154157397	154157528	True	NM_001043352,NM_001043353,NM_001043351,NM_153649,NR_030600,NM_152263,NM_001127320	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,-,+	TPM3,TPM3,TPM3,TPM3,MIR190B,TPM3,UBAP2L	-1672,-1672,-1672,-1672,8748,7138,35126
chr21:32999413-32999691	chr21	+	32999504	32999732	True	NM_000454,NM_003253	chr21,chr21	+,-	SOD1,TIAM1	32202,-68214
chr11:12982030-12983335	chr11	+	12982363	12983373	True	NM_001080521,NM_032320	chr11,chr11	+,-	RASSF10,BTBD10	47596,501515
chr17:46030558-46030772	chr17	+	46030562	46030731	True	NM_018129,NM_024320	chr17,chr17	+,-	PNPO,PRR15L	-11724,4429
chrX:71525739-71525982	chrX	+	71525867	71526031	True	NM_004143,NM_001170747,NM_001144885,NM_001144886,NM_001144887	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	CITED1,PIN4,CITED1,CITED1,CITED1	856,-124392,-103,1056,-103
chr2:74647020-74648202	chr2	+	74647155	74647890	True	NM_001145054,NM_032118	chr2,chr2	-,+	C2orf81,WDR54	-2311,994
chr6:114228833-114229561	chr6	+	114228838	114229476	True	NM_001527,NR_027060	chr6,chr6	-,+	HDAC2,FLJ34503	62933,-3338
chr2:183987097-183988931	chr2	+	183987508	183988871	True	NM_138285,NM_205842	chr2,chr2	+,-	NUP35,NCKAP1	211,-84279
chr12:58024926-58025722	chr12	+	58024949	58025627	True	NM_001478,NM_133489	chr12,chr12	-,+	B4GALNT1,SLC26A10	1408,-11307
chr14:75353385-75353735	chr14	+	75353384	75353784	True	NR_033814,NM_001080408,NM_001933	chr14,chr14,chr14	+,-,+	DLST,PROX2,DLST	-4843,-22847,-4843
chr22:36818084-36818616	chr22	+	36818452	36818648	True	NM_145343,NM_002473	chr22,chr22	+,-	APOL1,MYH9	-169386,-34389
chr1:166940855-166941168	chr1	+	166940979	166941175	True	NM_199351,NM_032858	chr1,chr1	-,+	ILDR2,MAEL	3444,17343
chr2:42079729-42080448	chr2	+	42080046	42080213	True	NR_033996,NM_004718	chr2,chr2	+,-	LOC388942,COX7A2L	24481,508202
chr17:74382286-74382818	chr17	+	74382350	74382780	True	NM_021972,NM_182965,NM_002766,NM_001142601,NM_001142602	chr17,chr17,chr17,chr17,chr17	+,+,-,+,+	SPHK1,SPHK1,PRPSAP1,SPHK1,SPHK1	-1711,-1711,-32120,-1711,-1112
chr17:73042808-73043158	chr17	+	73043036	73043170	True	NM_015353,NM_006356,NM_001003785	chr17,chr17,chr17	+,-,-	KCTD2,ATP5H,ATP5H	108,30,30
chr22:19455774-19457599	chr22	+	19455819	19457493	True	NM_005659,NM_001178010,NM_001178011,NM_001035247,NM_003504	chr22,chr22,chr22,chr22,chr22	-,+,+,-,+	UFD1L,CDC45,CDC45,UFD1L,CDC45	9297,9920,9920,9297,9922
chr8:181472-181853	chr6	+	170921276	170921378	False	NM_001172085,NM_001199461	chr6,chr6	+,-	TBP,PDCD2	-57911,-27496
chr8:181472-181853	chr1	-	763460	763562	False	NR_024321,NR_015368	chr1,chr1	-,+	NCRNA00115,LOC643837	-558,-449
chr8:181472-181853	chr8	+	181575	181823	True	NM_001042416,NM_001042415,NR_003572,NM_173539	chr8,chr8,chr8,chr8	+,+,-,+	ZNF596,ZNF596,RPL23AP53,ZNF596	560,560,547,376
chrX:149738044-149738454	chrX	+	149738047	149738485	True	NM_001184808,NM_000252	chrX,chrX	-,+	CD99L2,MTM1	328854,-1051
chr5:137773832-137774621	chr5	+	137774201	137774559	True	NM_004730,NM_016606	chr5,chr5	-,+	ETF1,REEP2	104423,216
chr1:154188606-154189512	chr1	+	154188613	154188731	True	NM_015449,NM_138740,NM_014847,NM_001098616,NM_001010979,NM_001127320	chr1,chr1,chr1,chr1,chr1,chr1	-,-,+,-,-,+	C1orf43,C1orf43,UBAP2L,C1orf43,C1orf189,UBAP2L	4598,4598,4593,4598,-9804,3923
chr12:97042659-97044296	chr12	+	97042677	97044041	True	NM_002595,NM_001135176	chr12,chr12	-,+	CDK17,NEDD1	-248311,256959
chr19:35609023-35609530	chr19	+	35609274	35609512	True	NM_001136012,NM_001136010,NM_001136011,NM_021910,NR_024562,NM_001136009,NM_001136008,NM_001136007,NM_005971	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,-,+,+,+,+	FXYD3,FXYD3,FXYD3,FXYD3,LOC100128675,FXYD3,FXYD3,FXYD3,FXYD3	-2594,-2594,-2594,-2594,-12066,-2594,-2594,-2594,-2594
chr19:8808332-8808585	chr19	+	8808368	8808612	True	NM_178525,NM_001004699	chr19,chr19	-,+	ACTL9,OR2Z1	610,32778
chr21:46422524-46422816	chr21	+	46422528	46422816	True	NR_033840,NR_024089,NM_058190	chr21,chr21,chr21	-,-,+	NCRNA00163,NCRNA00162,C21orf70	-8527,1876,-62624
chr2:234583461-234584598	chr2	+	234583471	234584353	True	NM_019077,NM_001001394,NM_021027	chr2,chr2,chr2	+,-,+	UGT1A7,DNAJB3,UGT1A9	6230,68369,-2978
chr9:124854623-124854944	chr9	+	124854639	124854862	True	NM_001139442,NM_194252,NM_198469	chr9,chr9,chr9	-,-,+	TTLL11,TTLL11,MORN5	1073,1073,67327
chr1:179199133-179200310	chr1	+	179199240	179200328	True	NM_001168238,NM_001168237,NM_001168236,NM_007314,NM_001136001,NM_003101	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,+	ABL2,ABL2,ABL2,ABL2,ABL2,SOAT1	-421,-421,-421,-421,-421,62688
chr6:110455922-110457177	chr6	+	110456534	110456905	True	NM_001024934,NM_015891	chr6,chr6	-,+	WASF1,CDC40	44360,44718
chr17:36501815-36502981	chr17	+	36501820	36502562	True	NM_001004334,NM_014598	chr17,chr17	-,+	GPR179,SOCS7	-2127,5444
chr6:14948724-14948935	chr6	+	14948785	14948967	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	297559,714372
chr15:90193233-90193715	chr15	+	90193317	90193634	True	NM_020212,NM_198525	chr15,chr15	+,-	WDR93,KIF7	40393,5105
chr10:25011804-25012056	chr10	+	25011813	25011875	True	NM_020824,NM_024838	chr10,chr10	-,+	ARHGAP21,THNSL1	772,293632
chrX:105861103-105861724	chrX	+	105861294	105861705	True	NM_001184782,NM_018015,NM_001171706	chrX,chrX,chrX	+,+,-	CXorf57,CXorf57,RIPPLY1	-6190,-6190,284917
chr15:25435676-25436680	chr15	+	25435705	25436711	True	NR_003308,NR_003358,NR_003311,NR_003310,NM_130838,NR_003305,NR_003344,NR_003309,NR_003351,NR_003299,NR_003300,NR_003301,NR_003302,NR_003303,NR_003304,NR_003297,NR_003306	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,-,+,+,+,+,+,+,+,+,+,+,+,+	SNORD115-16,SNORD115-43,SNORD115-19,SNORD115-18,UBE3A,SNORD115-13,SNORD115-29,SNORD115-17,SNORD115-36,SNORD115-7,SNORD115-8,SNORD115-9,SNORD115-10,SNORD115-11,SNORD115-12,SNORD115-5,SNORD115-14	7883,-1195,9758,9758,213992,1756,-1195,9758,-1195,-8224,-6303,-149,-149,-1195,-149,-146,3356
chr7:102715915-102716136	chr7	+	102715944	102716172	True	NM_001111038,NM_001161012,NM_001161013,NM_001161010,NM_001161011,NM_001161009,NM_031905,NM_145032	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,+,+,+,-	FBXL13,ARMC10,ARMC10,ARMC10,ARMC10,ARMC10,ARMC10,FBXL13	-656,-667,-667,-667,-667,-667,-667,-929
chr3:47955894-47956390	chr3	+	47956169	47956411	True	NR_031595,NM_003074	chr3,chr3	+,-	MIR1226,SMARCC1	-65186,-132764
chr19:50167416-50167646	chr19	+	50167435	50167581	True	NM_001040668,NM_001197128,NM_001571,NM_001197126,NM_001197127,NM_138639,NM_001197125,NM_001197124,NM_001197123,NM_001197122	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,-,-,-,+,-,-,-,-	BCL2L12,IRF3,IRF3,IRF3,IRF3,BCL2L12,IRF3,IRF3,IRF3,IRF3	817,1601,1601,1601,1601,817,1601,1601,1601,1601
chr16:57493589-57494059	chr16	+	57493656	57494100	True	NM_020313,NM_032940	chr16,chr16	-,+	CIAPIN1,POLR2C	-12287,2450
chr16:89785986-89786631	chr16	+	89785989	89786535	True	NM_152287,NR_036480,NM_001113525,NM_004913	chr16,chr16,chr16,chr16	+,+,+,-	ZNF276,LOC100128881,ZNF276,C16orf7	857,-7776,1416,909
chr16:30196765-30197410	chr16	+	30196768	30197337	True	NR_037608,NR_037609,NM_001014999,NM_007074,NM_001015000,NM_024044,NM_001031827,NR_002454,NM_001039182,NM_178044,NM_001193333	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,+,-,+,-,+,+	SLX1A-SULT1A3,SLX1B-SULT1A4,SLX1A,CORO1A,SLX1A,SLX1B,BOLA2,LOC606724,BOLA2B,SLX1B,CORO1A	8416,8416,7826,-2088,7826,7826,8340,2667,8340,7826,-2088
chr8:37387444-37387865	chr8	+	37387538	37387906	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	165394,217708
chr2:148778508-148779305	chr2	+	148778507	148779237	True	NM_001190881,NM_001190882,NM_001190879,NM_018328,NM_181741,NM_181742,NM_002552	chr2,chr2,chr2,chr2,chr2,chr2,chr2	-,-,-,+,-,-,-	ORC4,ORC4,ORC4,MBD5,ORC4,ORC4,ORC4	-177,-201,-191,22,-44,-14,-178
chr5:140572475-140573855	chr5	+	140572483	140573369	True	NM_031947,NM_019119,NM_018930,NM_018931	chr5,chr5,chr5,chr5	-,+,+,+	SLC25A2,PCDHB9,PCDHB10,PCDHB11	110293,-5641,-582,5978
chrX:103014221-103014650	chrX	+	103014250	103014486	True	NM_001172285,NM_001128834	chrX,chrX	-,+	GLRA4,PLP1	-30698,16952
chr7:72423068-72423668	chr7	+	72423430	72423632	True	NR_033323,NR_003602	chr7,chr7	-,+	NSUN5P2,LOC541473	1720,16559
chr7:72423068-72423668	chr7	-	75041274	75041476	False	NR_003614,NR_033322	chr7,chr7	-,+	PMS2L2,NSUN5P1	-53059,-1701
chr19:18113068-18113320	chr19	+	18113114	18113360	True	NM_001025604,NM_015683,NM_005535	chr19,chr19,chr19	+,+,-	ARRDC2,ARRDC2,IL12RB1	-1221,5616,84387
chr10:98741493-98742249	chr10	+	98741500	98742210	True	NM_003061,NM_015652	chr10,chr10	-,+	SLIT1,C10orf12	203523,-510
chr17:5030987-5031832	chr17	+	5031023	5031771	True	NM_014519,NM_004505	chr17,chr17	-,+	ZNF232,USP6	-4626,77
chr10:73157856-73159597	chr10	+	73157975	73159385	True	NM_001164375,NM_001171930,NM_001171931,NM_001171932,NM_022124,NM_052836	chr10,chr10,chr10,chr10,chr10,chr10	-,+,+,+,+,+	C10orf105,CDH23,CDH23,CDH23,CDH23,CDH23	320243,-1335,-1335,-1335,-1335,-1335
chrX:65241880-65242570	chrX	+	65241910	65242533	True	NR_029637,NM_001100431	chrX,chrX	+,-	MIR223,VSIG4	-3249,17485
chr3:138329584-138329859	chr3	+	138329735	138329885	True	NM_018147,NM_001033030,NM_001033032,NM_024491,NM_001033031	chr3,chr3,chr3,chr3,chr3	+,+,+,-,+	FAIM,FAIM,FAIM,CEP70,FAIM	-1867,-2244,-2244,-16606,-2244
chr4:146557655-146559241	chr4	+	146557663	146559143	True	NM_178835,NM_172250	chr4,chr4	-,+	ZNF827,MMAA	300514,-17174
chr2:192015444-192015912	chr2	+	192015515	192015883	True	NM_001130158,NM_003151	chr2,chr2	+,-	MYO1B,STAT4	94223,92
chr1:115124942-115126147	chr1	+	115125046	115125936	True	NM_003176,NM_005872	chr1,chr1	+,-	SYCP1,BCAS2	271518,-781
chr16:48275484-48277166	chr16	+	48276782	48276852	True	NM_032583,NM_145186,NM_031490	chr16,chr16,chr16	-,-,+	ABCC11,ABCC11,LONP2	-7694,-7694,1358
chr14:21498449-21500102	chr14	+	21498483	21500135	True	NM_001012264,NM_201536,NM_201537,NM_201535,NM_173846,NM_201541,NM_016250,NM_201540,NM_201538,NM_201539	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	-,-,-,-,+,-,-,-,-,-	RNASE13,NDRG2,NDRG2,NDRG2,TPPP2,NDRG2,NDRG2,NDRG2,NDRG2,NDRG2	2859,-4548,-4548,-4548,-189,-5219,-4548,-5219,-5219,-5219
chr1:197886416-197886939	chr1	+	197886445	197886723	True	NM_001014434,NM_001195216,NM_020204	chr1,chr1,chr1	+,-,+	LHX9,DENND1B,LHX9	-4862,-141822,20
chr7:6654140-6654721	chr7	+	6654388	6654676	True	NM_017560,NM_001145118	chr7,chr7	+,-	ZNF853,GRID2IP	850,-63321
chr2:11888830-11889076	chr2	+	11888832	11889070	True	NM_012344,NM_145693	chr2,chr2	-,+	NTSR2,LPIN1	-78503,-2143
chr17:27917605-27918759	chr17	+	27917746	27918742	True	NM_001085454,NM_014030,NM_152345	chr17,chr17,chr17	-,-,+	GIT1,GIT1,ANKRD13B	-1136,-1136,1784
chr22:46546836-46547054	chr22	+	46546993	46547059	True	NM_018280,NM_001001928,NM_005036	chr22,chr22,chr22	-,+,+	C22orf26,PPARA,PPARA	-96969,-545,-545
chr16:680875-681128	chr16	+	680996	681056	True	NM_001040165,NM_001040160,NM_032366,NM_001040162,NM_053284,NM_001040161	chr16,chr16,chr16,chr16,chr16,chr16	-,-,-,-,+,-	C16orf13,C16orf13,C16orf13,C16orf13,WFIKKN1,C16orf13	5341,5341,5341,5341,-35,5341
chr9:95302440-95303905	chr9	+	95303065	95303151	True	NR_036505,NM_001393,NM_001197295,NM_001197296	chr9,chr9,chr9,chr9	+,-,-,-	LOC100128361,ECM2,ECM2,ECM2	77180,-4691,-4691,-4691
chr1:26231582-26231957	chr1	+	26231581	26231895	True	NR_037481,NM_203401,NM_203399,NM_005563,NM_001099626,NM_001145454	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,+,-	MIR3917,STMN1,STMN1,STMN1,FAM54B,STMN1	1100,799,1523,1148,-84313,1148
chr3:999413-1000484	chr3	+	999613	1000361	True	NM_000564,NM_014461	chr3,chr3	-,+	IL5RA,CNTN6	2151755,134267
chr5:175664228-175665098	chr5	+	175664292	175664994	True	NR_036494,NM_198567	chr5,chr5	-,+	LOC643201,C5orf25	-37994,375
chr5:175664228-175665098	chr5	-	177099667	177100370	False	NR_026921,NM_007255	chr5,chr5	-,+	LOC202181,B4GALT7	-389,-72600
chr14:96844545-96845374	chr14	+	96844730	96845380	True	NM_018036,NM_016472	chr14,chr14	-,+	ATG2B,C14orf129	-15052,641
chr18:711970-712297	chr18	+	712033	712244	True	NM_001126123,NM_001071,NM_017512,NM_202758	chr18,chr18,chr18,chr18	-,+,-,-	ENOSF1,TYMS,ENOSF1,ENOSF1	469,-54480,469,324
chr8:101967382-101968060	chr8	+	101967477	101967975	True	NM_145690,NM_001135702,NM_001135701,NM_001135700,NM_001135699,NM_003406,NR_033962	chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,-,-,+	YWHAZ,YWHAZ,YWHAZ,YWHAZ,YWHAZ,YWHAZ,FLJ42969	-3120,-4678,-3917,-3917,-2256,-1854,96306
chr1:161391903-161392249	chr1	+	161391963	161392055	True	NM_001136219,NM_001013625	chr1,chr1	+,-	FCGR2A,C1orf192	83149,-54299
chr19:49551760-49552584	chr19	+	49552056	49552424	True	NM_033183,NM_033142,NM_033043	chr19,chr19,chr19	-,-,+	CGB8,CGB7,CGB5	-6,6623,-5005
chr19:49551760-49552584	chr19	-	49547038	49547238	False	NR_004383,NM_033183,NM_033377,NM_033043	chr19,chr19,chr19,chr19	+,-,-,+	SNAR-G1,CGB8,CGB1,CGB5	-6812,5180,-6847,13
chr19:49551760-49552584	chr19	+	49527408	49527656	False	NM_000894,NM_000737,NM_033378,NR_024244	chr19,chr19,chr19,chr19	-,-,+,-	LHB,CGB,CGB2,SNAR-G2	-7061,-13,7473,7438
chr3:149793100-149793415	chr3	+	149793109	149793351	True	NM_053024,NR_036538	chr3,chr3	-,+	PFN2,LOC646903	-104368,-104101
chr13:96298318-96299108	chr13	+	96298476	96298868	True	NM_006260,NM_198968,NM_014934	chr13,chr13,chr13	+,-,-	DNAJC3,DZIP1,DZIP1	30524,-1519,-1519
chr11:61449577-61449842	chr11	+	61449584	61449788	True	NR_026882,NM_006133	chr11,chr11	-,+	DKFZP434K028,DAGLA	75398,-1730
chr10:89102950-89103752	chr10	+	89103024	89103335	True	NR_024397,NR_029408	chr10,chr10	-,+	LOC728190,LOC439994	-709,-907
chr10:89102950-89103752	chr10	+	81586977	81587286	False	NR_029407,NM_003019	chr10,chr10	+,-	LOC642361,SFTPD	-1370,121625
chr3:122345679-122347130	chr3	+	122345688	122347144	True	NM_031458,NM_152615	chr3,chr3	-,+	PARP9,PARP15	-62165,-11227
chr14:93807516-93808380	chr14	+	93808118	93808406	True	NM_020818,NM_001002860,NM_018167,NM_182971	chr14,chr14,chr14,chr14	+,-,-,+	KIAA1409,BTBD7,BTBD7,COX8C	-8604,-8733,-8733,5130
chr9:98782386-98782671	chr9	+	98782467	98782709	True	NR_033838,NR_024129	chr9,chr9	+,-	LOC158435,NCRNA00092	45411,1378
chr16:79822114-79822866	chr16	+	79822180	79822866	True	NM_005360,NM_130897	chr16,chr16	-,+	MAF,DYNLRB2	-187558,751987
chr2:27991722-27992423	chr2	+	27991721	27992032	True	NM_014860,NM_004891,NM_145330	chr2,chr2,chr2	-,+,+	SUPT7L,MRPL33,MRPL33	-105272,2551,2551
chr10:102790640-102790893	chr10	+	102790702	102790902	True	NM_001195263,NM_024895,NM_030971	chr10,chr10,chr10	-,-,+	PDZD7,PDZD7,SFXN3	62,62,93
chr15:63247026-63248212	chr15	+	63247092	63248212	True	NM_000366,NM_015920	chr15,chr15	+,-	TPM1,RPS27L	86625,201579
chr21:46341052-46341727	chr21	+	46341129	46341611	True	NM_058190,NM_000211,NM_001127491	chr21,chr21,chr21	+,-,-	C21orf70,ITGB2,ITGB2	18343,-164,7200
chr13:40229108-40229742	chr13	+	40229136	40229644	True	NM_020751,NM_001145079,NR_026745,NR_036190	chr13,chr13,chr13,chr13	+,+,+,-	COG6,COG6,COG6,MIR4305	119,119,119,8680
chrX:119737171-119737856	chrX	+	119737329	119737893	True	NM_014060,NM_001137554,NM_001011551	chrX,chrX,chrX	+,+,-	MCTS1,MCTS1,C1GALT1C1	-4,658,26162
chr19:42388824-42389623	chr19	+	42388918	42389430	True	NM_198977,NM_001783,NM_021601,NM_004706,NM_199002,NM_173506	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,-	ARHGEF1,CD79A,CD79A,ARHGEF1,ARHGEF1,LYPD4	-1702,-7779,-7779,-1702,-523,-40410
chr2:106682542-106683307	chr2	+	106682563	106683272	True	NM_025076,NM_032411	chr2,chr2	-,+	UXS1,C2orf40	127573,-501
chr10:96162849-96163088	chr10	+	96162900	96162978	True	NM_022451,NM_015188	chr10,chr10	-,+	NOC3L,TBC1D12	-40217,-765
chr14:71111232-71111683	chr14	+	71111252	71111548	True	NM_015351,NM_005466	chr14,chr14	+,-	TTC9,MED6	-2800,-43868
chr10:70940301-70940896	chr10	+	70940479	70940897	True	NM_001057,NM_003171	chr10,chr10	-,+	TACR2,SUPV3L1	235827,-537
chr1:43629007-43630291	chr1	+	43629528	43630213	True	NM_001159936,NM_001167965,NM_001167966,NR_030778,NM_152498,NM_006824	chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,+,+,-	EBNA1BP2,WDR65,WDR65,WDR65,WDR65,EBNA1BP2	8078,7787,7801,7787,7787,7823
chr22:50610771-50611248	chr22	+	50610770	50610868	True	NR_027691,NM_052839,NM_001160300,NM_020461	chr22,chr22,chr22,chr22	+,+,+,-	PANX2,PANX2,PANX2,TUBGCP6	-1661,-1661,-1661,72582
chr8:98655482-98655916	chr8	+	98655635	98655961	True	NM_033512,NM_178812	chr8,chr8	-,+	TSPYL5,MTDH	-365459,445
chr8:42257642-42258473	chr8	+	42257914	42258522	True	NM_014420,NM_001135694,NM_005662	chr8,chr8,chr8	-,+,+	DKK4,VDAC3,VDAC3	-23240,-8633,-8633
chr22:51174291-51175362	chr22	+	51174366	51175390	True	NM_001003789,NM_001097	chr22,chr22	-,+	RABL2B,ACR	46748,1261
chr3:113160073-113160275	chr3	+	113160111	113160313	True	NM_018338,NM_017699,NM_001164496	chr3,chr3,chr3	-,+,-	WDR52,SIDT1,WDR52	98,90904,98
chr1:165183637-165184274	chr1	+	165183692	165184200	True	NM_001174069,NM_001005214	chr1,chr1	-,+	LMX1A,LRRC52	141328,329277
chr1:156696935-156698034	chr1	+	156697027	156697913	True	NM_030980,NM_015997,NM_001142560	chr1,chr1,chr1	-,+,+	ISG20L2,RRNAD1,RRNAD1	-58,349,349
chr1:20395438-20396711	chr1	+	20395459	20396577	True	NM_000929,NM_012400	chr1,chr1	+,-	PLA2G5,PLA2G2D	123,49481
chr15:31125549-31126193	chr15	+	31125722	31126160	True	NM_017762,NM_001146095	chr15,chr15	-,+	MTMR10,FAN1	157697,69894
chr3:145879314-145879652	chr3	+	145879339	145879651	True	NM_182943,NM_000935,NM_003412	chr3,chr3,chr3	-,-,+	PLOD2,PLOD2,ZIC1	-57,-57,1247529
chr14:38062044-38063736	chr14	+	38062102	38063725	True	NM_138731,NM_004496	chr14,chr14	+,-	MIPOL1,FOXA1	-395035,814
chr9:130909542-130910274	chr9	+	130909998	130910322	True	NR_027812,NM_005564	chr9,chr9	-,+	PTGES2,LCN2	-19286,1409
chr7:137525256-137526732	chr7	+	137525370	137526750	True	NM_004717,NM_001190906	chr7,chr7	-,+	DGKI,AKR1D1	4916,234427
chr12:53401151-53402540	chr12	+	53401150	53402451	True	NM_001417,NR_033854	chr12,chr12	+,-	EIF4B,LOC283335	-1139,45831
chr2:75196442-75196677	chr2	+	75196445	75196713	True	NM_019896,NM_001058	chr2,chr2	+,-	POLE4,TACR1	-10721,229982
chr22:38071683-38072099	chr22	+	38071905	38071999	True	NM_002305,NM_006498	chr22,chr22	+,-	LGALS1,LGALS2	-347,-95881
chr2:17720414-17721068	chr2	+	17720547	17721018	True	NM_003385,NM_001099218	chr2,chr2	+,-	VSNL1,RAD51AP2	788,-20841
chr19:6483126-6483392	chr19	+	6483259	6483411	True	NM_174881,NM_024898	chr19,chr19	+,-	CRB3,DENND1C	-19062,-1461
chr13:42845947-42846179	chr13	+	42846058	42846152	True	NM_016248,NM_001009814	chr13,chr13	+,-	AKAP11,KIAA0564	136,-310837
chr14:23307402-23308470	chr14	+	23307581	23308157	True	NM_004995,NM_181304,NM_181305,NM_181306,NM_181307,NM_180982,NM_001126106,NM_178336	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,+,+,+,-,+	MMP14,MRPL52,MRPL52,MRPL52,MRPL52,MRPL52,SLC7A7,MRPL52	-1839,-8540,-8540,-8540,-8540,-8540,-18567,-8540
chr1:236563024-236564013	chr1	+	236563031	236563863	True	NM_145861,NM_019891,NM_080738	chr1,chr1,chr1	+,-,+	EDARADD,ERO1LB,EDARADD	-5402,-117692,-4366
chr1:46925993-46927403	chr1	+	46926130	46927312	True	NM_147192,NM_001097611	chr1,chr1	+,-	DMBX1,KNCN	45355,89625
chr3:160116794-160117454	chr3	+	160116922	160117455	True	NR_029525,NM_001002800,NR_029663,NM_020800,NM_005496,NM_001190241	chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,-,+,-	MIR16-2,SMC4,MIR15B,IFT80,SMC4,IFT80	5077,0,4920,9,891,9
chr16:30065563-30065781	chr16	+	30065664	30065808	True	NM_000034,NM_031478,NM_184043	chr16,chr16,chr16	+,-,+	ALDOA,FAM57B,ALDOA	-1227,-23478,9791
chr12:12764496-12764807	chr12	+	12764560	12764856	True	NM_001310,NM_030640	chr12,chr12	+,-	CREBL2,DUSP16	-26,-49112
chr1:28501070-28501716	chr1	+	28501143	28501765	True	NM_016311,NM_001164723,NM_000952	chr1,chr1,chr1	+,-,-	ATPIF1,PTAFR,PTAFR	60836,1469,1740
chr17:40934513-40935811	chr17	+	40934574	40935786	True	NM_032353,NM_032387,NM_001040431	chr17,chr17,chr17	+,+,-	VPS25,WNK4,CCDC56	-9171,-1976,14968
chr8:90975548-90975981	chr8	+	90975551	90976011	True	NM_002485,NM_001359	chr8,chr8	-,+	NBN,DECR1	20938,37568
chr6:53009519-53011311	chr6	+	53010053	53010867	True	NM_012347,NM_003643	chr6,chr6	+,-	FBXO9,GCM1	-74333,2807
chr2:119916569-119916993	chr2	+	119916753	119916991	True	NM_001008410,NM_182528	chr2,chr2	+,-	STEAP3,C1QL2	64392,-282
chr16:1755540-1755772	chr16	+	1755663	1755785	True	NM_002513,NM_015133,NM_001040439	chr16,chr16,chr16	-,+,+	NME3,MAPK8IP3,MAPK8IP3	65975,435,435
chr15:77363323-77363532	chr15	+	77363336	77363408	True	NM_003978,NM_005724,NM_198902,NM_001168412	chr15,chr15,chr15,chr15	+,-,-,-	PSTPIP1,TSPAN3,TSPAN3,TSPAN3	-75922,212,212,212
chr3:146193874-146194462	chr3	+	146193905	146194441	True	NM_003412,NM_001199978	chr3,chr3	+,-	ZIC1,PLSCR2	932739,-6817
chr2:152817599-152818559	chr2	+	152817695	152818531	True	NM_001005747,NM_052905	chr2,chr2	-,+	CACNB4,FMNL2	12004,373219
chr8:87355371-87356565	chr8	+	87355420	87356605	True	NM_007013,NM_138817	chr8,chr8	+,-	WWP1,SLC7A13	-477,-112816
chrX:7164770-7165433	chrX	+	7164784	7165433	True	NM_000351,NM_001178135	chrX,chrX	+,-	STS,HDHD1	-27364,-98553
chr12:50677479-50678439	chr12	+	50677556	50678388	True	NM_016357,NM_001170804,NM_001113546	chr12,chr12,chr12	-,+,-	LIMA1,LARP4,LIMA1	-203,116203,-203
chr13:99623884-99624626	chr13	+	99623994	99624618	True	NM_001144072,NM_001130050,NM_001130048	chr13,chr13,chr13	+,-,-	UBAC2,DOCK9,DOCK9	228060,5770,5770
chr12:57917832-57918538	chr12	+	57917855	57918471	True	NM_004083,NM_052897,NM_001195053,NM_001195055,NM_001195054,NM_001195057,NM_001195056	chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,+,-,-,-,-,-	DDIT3,MBD6,DDIT3,DDIT3,DDIT3,DDIT3,DDIT3	-3555,-1247,-3555,-3555,-3555,-3555,-3555
chr2:220095619-220096208	chr2	+	220095744	220096104	True	NM_024085,NM_018089,NM_001077198,NM_001042410	chr2,chr2,chr2,chr2	-,+,-,+	ATG9A,ANKZF1,ATG9A,ANKZF1	-1383,-1316,-1383,-1185
chr18:9883958-9884652	chr18	+	9884074	9884518	True	NM_005134,NM_001098529,NM_032243	chr18,chr18,chr18	-,+,+	PPP4R1,TXNDC2,TXNDC2	-269474,1204,1204
chr14:23876345-23876726	chr14	+	23876350	23876710	True	NM_138460,NM_002471	chr14,chr14	+,-	CMTM5,MYH6	-30384,826
chr19:6361181-6361532	chr19	+	6361371	6361573	True	NM_006012,NM_004158	chr19,chr19	+,-	CLPP,PSPN	9,14337
chr6:167038853-167039099	chr6	+	167038883	167039084	True	NM_021135,NM_007045	chr6,chr6	-,+	RPS6KA2,FGFR1OP	1701,373731
chrX:151902184-151902514	chrX	+	151902208	151902540	True	NM_001166387,NM_001166386,NM_001102576,NM_005367,NM_153478	chrX,chrX,chrX,chrX,chrX	-,-,+,-,+	MAGEA12,MAGEA12,CSAG1,MAGEA12,CSAG1	694,611,687,694,687
chr6:11232631-11232856	chr6	+	11232689	11232813	True	NM_001135575,NM_182966,NM_006403	chr6,chr6,chr6	+,-,-	LOC221710,NEDD9,NEDD9	-138474,152,152
chr3:3166698-3167351	chr3	+	3167138	3167389	True	NM_175727,NM_182916	chr3,chr3	-,+	IL5RA,TRNT1	-15080,1210
chr3:51536132-51536427	chr3	+	51536222	51536290	True	NM_001171904,NM_014703,NM_015106	chr3,chr3,chr3	-,-,+	VPRBP,VPRBP,RAD54L2	-2204,-2204,39305
chr11:3253325-3253530	chr11	+	3253405	3253529	True	NR_027138,NM_001039165	chr11,chr11	+,-	C11orf36,MRGPRE	-13894,137
chr7:35141439-35142118	chr7	+	35141537	35142131	True	NR_002833,NM_207173	chr7,chr7	-,+	DPY19L2P1,NPSR1	5265,-443692
chr7:35141439-35142118	chr7	+	102834954	102835032	False	NM_004279,NM_198990	chr7,chr7	+,-	PMPCB,NAPEPLD	102840,-45385
chr6:36969986-36971910	chr6	+	36969991	36971696	True	NM_173558,NM_014341	chr6,chr6	+,-	FGD2,MTCH1	1726,-16042
chr20:21493104-21493426	chr20	+	21493173	21493475	True	NM_002509,NM_006192	chr20,chr20	-,+	NKX2-2,PAX1	1239,192821
chrX:13363409-13364800	chrX	+	13363409	13364739	True	NM_001167890,NM_001135995	chrX,chrX	+,-	EGFL6,ATXN3L	222954,-24891
chr22:50247989-50248357	chr22	+	50248207	50248325	True	NM_014838,NM_014577	chr22,chr22	+,-	ZBED4,BRD1	-762,-29755
chr1:241586222-241587138	chr1	+	241586416	241587099	True	NM_002924,NM_003679	chr1,chr1	-,+	RGS7,KMO	-65938,108580
chr15:25306591-25307362	chr15	+	25306601	25307349	True	NR_003322,NR_003317,NR_003320,NR_003321,NR_003324,NR_003323,NR_003319,NR_003318,NM_130838	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,-	SNORD116-7,SNORD116-2,SNORD116-5,SNORD116-6,SNORD116-9,SNORD116-8,SNORD116-4,SNORD116-3,UBE3A	129,2822,129,2822,-4646,8228,-1968,-4646,343354
chr18:3261150-3261887	chr18	+	3261191	3261649	True	NM_001144945,NM_001144944,NM_033546,NM_019856	chr18,chr18,chr18,chr18	+,+,+,-	MYL12B,MYL12B,MYL12B,MYOM1	1067,961,461,-41085
chr9:19128405-19128877	chr9	+	19128587	19128806	True	NM_001122,NR_038064,NM_006570	chr9,chr9,chr9	-,-,+	PLIN2,PLIN2,RRAGA	-983,-983,-79267
chrX:14867036-14868326	chrX	+	14867136	14868001	True	NM_001018113,NM_152581	chrX,chrX	-,+	FANCB,MOSPD2	23240,23525
chr21:37508352-37508643	chr21	+	37508356	37508667	True	NM_017438,NM_001236	chr21,chr21	-,+	SETD4,CBR3	-75540,-1150
chr12:1054995-1056346	chr12	+	1055204	1056188	True	NM_134424,NM_178039	chr12,chr12	-,+	RAD52,ERC1	2727,44215
chr1:43889300-43889676	chr1	+	43889416	43889662	True	NM_001190880,NM_015284	chr1,chr1	-,+	HYI,KIAA0467	30048,-670
chr19:16125338-16126525	chr19	+	16125580	16126534	True	NR_026828,NM_021187	chr19,chr19	+,-	LOC126536,CYP4F11	-91,-79904
chr1:168218632-168219183	chr1	+	168218781	168219212	True	NR_026844,NM_199344	chr1,chr1	-,+	ANKRD36BP1,SFT2D2	-2113,-23583
chr20:57467342-57467608	chr20	+	57467470	57467580	True	NM_001077489,NM_001077488,NM_000516,NR_002785,NR_003259,NM_080426	chr20,chr20,chr20,chr20,chr20,chr20	+,+,+,-,+,+	GNAS,GNAS,GNAS,GNAS-AS1,GNAS,GNAS	-1095,-1095,-1095,-41512,-3341,-1095
chr14:91577073-91577465	chr14	+	91577219	91577433	True	NM_001102369,NM_001102368,NM_001102367,NM_001102366,NM_024952,NM_182398	chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,+,+,-	C14orf159,C14orf159,C14orf159,C14orf159,C14orf159,RPS6KA5	2923,2923,3545,2923,2923,-50226
chr4:3768569-3769185	chr4	+	3768639	3769049	True	NM_000683,NR_034136	chr4,chr4	+,-	ADRA2C,LOC100133461	-394,-89057
chr3:9919238-9920349	chr3	+	9919391	9920195	True	NM_032492,NM_022094,NM_001199623,NM_001199552,NM_001199551	chr3,chr3,chr3,chr3,chr3	+,-,-,-,-	JAGN1,CIDEC,CIDEC,CIDEC,CIDEC	12075,595,351,1793,1793
chr12:56915158-56915832	chr12	+	56915345	56915882	True	NM_013267,NM_002898	chr12,chr12	-,+	GLS2,RBMS2	-33164,3
chr4:186129603-186130411	chr4	+	186129982	186130453	True	NM_020827,NM_031953	chr4,chr4	-,+	KIAA1430,SNX25	-4800,830
chr1:46808250-46809020	chr1	+	46808568	46809014	True	NM_006369,NM_199044	chr1,chr1	-,+	LRRC41,NSUN4	-39530,-2229
chr2:187464900-187466747	chr2	+	187464911	187466785	True	NM_182521,NM_001144999	chr2,chr2	-,+	ZSWIM2,ITGAV	247162,-32
chr1:220220866-220221332	chr1	+	220221185	220221381	True	NM_004446,NM_018060	chr1,chr1	-,+	EPRS,IARS2	-1185,46073
chr16:21433558-21435044	chr16	+	21433684	21434674	True	NR_026675,NM_130464	chr16,chr16	+,-	NCRNA00169,NPIPL3	-121565,2034
chr16:21433558-21435044	chr16	+	21865962	21866952	False	NM_003366,NR_003370	chr16,chr16	+,-	UQCRC2,RRN3P1	97656,-35467
chr16:21433558-21435044	chr16	-	22526875	22527865	False	NM_001135865,NR_027460	chr16,chr16	+,-	LOC100132247,RRN3P3	-2082,-77839
chr16:21433558-21435044	chr16	+	29514859	29515179	False	NR_002557,NM_177552	chr16,chr16	-,+	LOC613038,SULT1A3	-35960,-43703
chr16:21433558-21435044	chr16	+	30254828	30255148	False	NR_002555,NM_177552	chr16,chr16	-,+	LOC613037,SULT1A3	1834,-44330
chr5:172263718-172264855	chr5	+	172263778	172264827	True	NM_004417,NM_001031711	chr5,chr5	-,+	DUSP1,ERGIC1	-65575,-2606
chrX:123481393-123482875	chrX	+	123481403	123482905	True	NM_002351,NM_001114937,NM_001163278,NM_001081550	chrX,chrX,chrX,chrX	+,+,-,-	SH2D1A,SH2D1A,ODZ1,THOC2	-1322,-1322,614811,-614499
chr1:32718977-32720272	chr1	+	32719306	32719750	True	NM_032648,NR_026850,NM_005356	chr1,chr1,chr1	+,-,+	FAM167B,MTMR9LP,LCK	-6539,-11995,-2517
chr2:44292755-44294024	chr2	+	44292998	44293326	True	NM_133259,NM_001033556	chr2,chr2	-,+	LRPPRC,PPM1B	-69854,102673
chr12:93412000-93412540	chr12	+	93412358	93412577	True	NM_001004330,NM_003566	chr12,chr12	+,-	PLEKHG7,EEA1	-282150,-89251
chr10:134741062-134741487	chr10	+	134741123	134741451	True	NM_173572,NM_001083909	chr10,chr10	-,+	C10orf93,GPR123	14688,159957
chr11:111250221-111250825	chr11	+	111250320	111250848	True	NM_001136105,NM_006235	chr11,chr11	+,-	C11orf93,POU2AF1	-80395,-163
chr5:56777227-56777822	chr5	+	56777274	56777690	True	NM_001127236,NM_001017992	chr5,chr5	+,-	GPBP1,ACTBL2	-267430,996
chr7:26904741-26906142	chr7	+	26904744	26905757	True	NM_003930,NM_001145531	chr7,chr7	-,+	SKAP2,C7orf71	-403,-227306
chr7:33953184-33953664	chr7	+	33953200	33953574	True	NM_133468,NM_203288	chr7,chr7	+,-	BMPER,RP9	-8144,-804198
chr18:56974508-56975074	chr18	+	56974536	56974966	True	NM_181654,NM_002091	chr18,chr18	-,+	CPLX4,GRP	10965,-87187
chr9:19126962-19127335	chr9	+	19127042	19127216	True	NM_001122,NR_038064,NM_006570	chr9,chr9,chr9	-,-,+	PLIN2,PLIN2,RRAGA	438,438,-77722
chr15:71059647-71061418	chr15	+	71060428	71061390	True	NM_018003,NM_001199017	chr15,chr15	-,+	UACA,LRRC49	-4578,123537
chr12:120884572-120885037	chr12	+	120884654	120884852	True	NM_016399,NM_176818,NM_004373,NR_033684	chr12,chr12,chr12,chr12	-,+,+,+	TRIAP1,GATC,COX6A1,GATC	-439,-464,-8801,-464
chr2:132232073-132233197	chr2	+	132232455	132233245	True	NM_001085365,NM_080386	chr2,chr2	-,+	MZT2A,TUBA3D	16869,420
chr4:178365709-178366215	chr4	+	178365735	178366056	True	NR_033655,NM_000027,NM_018248,NM_001171988	chr4,chr4,chr4,chr4	-,-,+,-	AGA,AGA,NEIL3,AGA	-2078,-2078,-134804,-2078
chr11:188096-189433	chr11	+	189382	189452	True	NM_053280,NM_001097610,NM_145651,NM_001098787	chr11,chr11,chr11,chr11	+,+,+,-	ODF3,LOC653486,SCGB1C1,BET1L	7308,3627,3627,18020
chr2:219221584-219221849	chr2	+	219221588	219221898	True	NM_198559,NM_022152	chr2,chr2	+,-	C2orf62,TMBIM1	-60,-64308
chr10:46925532-46927155	chr10	+	46925543	46927035	True	NR_027632,NM_181519	chr10,chr10	+,-	FAM35B,SYT15	-27958,43624
chr10:46925532-46927155	chr10	+	47407610	47409106	False	NR_024495,NR_027634	chr10,chr10	-,+	LOC642826,FAM35B2	-164116,-27946
chr10:46925532-46927155	chr10	+	88938069	88938762	False	NM_005271,NM_001099338	chr10,chr10	-,+	GLUD1,FAM22A	-83293,46442
chr19:46805824-46807063	chr19	+	46806269	46806689	True	NM_152796,NM_152795,NM_152794,NM_022462,NM_032040	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	HIF3A,HIF3A,HIF3A,HIF3A,CCDC8	-4688,-6018,166,-4688,110280
chr8:15406773-15407698	chr8	+	15407286	15407360	True	NM_139167,NM_178234,NM_006765	chr8,chr8,chr8	-,+,+	SGCZ,TUSC3,TUSC3	-311494,-9750,-9750
chr16:1755153-1755540	chr16	+	1755309	1755391	True	NM_002513,NM_015133,NM_001040439	chr16,chr16,chr16	-,+,+	NME3,MAPK8IP3,MAPK8IP3	66369,829,829
chr12:96347652-96349541	chr12	+	96347724	96349465	True	NM_152435,NM_182496	chr12,chr12	+,-	AMDHD1,CCDC38	-10711,-11296
chr3:129726530-129727111	chr3	+	129726694	129726842	True	NM_007117,NR_024252	chr3,chr3	+,-	TRH,LOC729375	-33631,103484
chr7:97622279-97622856	chr7	+	97622407	97622856	True	NM_006188,NM_014916	chr7,chr7	-,+	OCM2,LMTK2	-2991,113340
chr6:20206832-20208398	chr6	+	20206946	20208393	True	NM_001949,NM_001080480	chr6,chr6	+,-	E2F3,MBOAT1	193743,4327
chr3:88028557-88030503	chr3	+	88028562	88030334	True	NM_001008390,NM_000866	chr3,chr3	-,+	CGGBP1,HTR1F	77862,1391
chr4:467716-467952	chr4	+	467772	467850	True	NR_002451,NM_001127178	chr4,chr4	-,+	ABCA11P,PIGG	198,25138
chr14:65569904-65570311	chr14	+	65569927	65570345	True	NM_002028,NM_197957,NM_145113,NM_145112,NM_145114,NM_145116,NM_002382	chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,-,-,-,-,-,-	FNTB,MAX,MAX,MAX,MAX,MAX,MAX	-116471,-700,-700,-700,-700,-700,-700
chr8:22785710-22786042	chr8	+	22785773	22785981	True	NM_144962,NM_001160036	chr8,chr8	-,+	PEBP4,RHOBTB2	-352,58948
chr12:100559468-100560060	chr12	+	100559468	100560022	True	NR_036632,NR_024261,NR_031728	chr12,chr12,chr12	-,-,+	GOLGA2B,GOLGA2B,MIR1827	7149,7149,23639
chr1:24236998-24238255	chr1	+	24237222	24238286	True	NM_001841,NM_017761	chr1,chr1	-,+	CNR2,PNRC2	1581,48014
chr19:21689863-21691093	chr19	+	21689904	21691142	True	NM_001001415,NM_021269	chr19,chr19	+,-	ZNF429,ZNF708	-1518,-177692
chr19:2255491-2255914	chr19	+	2255682	2255764	True	NR_036207,NM_000479,NM_144616	chr19,chr19,chr19	+,+,-	MIR4321,AMH,JSRP1	-5095,-6620,708
chr16:69364791-69365070	chr16	+	69364877	69364985	True	NM_022341,NM_001199434,NM_016101,NM_032382	chr16,chr16,chr16,chr16	-,+,+,-	PDF,NIP7,NIP7,COG8	-379,8429,8429,8591
chr6:28879256-28879977	chr6_qbl_hap6	+	182696	183209	False	NM_001195202,NM_006510	chr6_qbl_hap6,chr6_qbl_hap6	+,-	LOC100129636,TRIM27	124187,12010
chr6:28879256-28879977	chr6	+	28879295	28879808	True	NM_001195202,NM_006510	chr6,chr6	+,-	LOC100129636,TRIM27	124191,12010
chr6:28879256-28879977	chr6_ssto_hap7	+	220210	220723	False	NM_001195202,NM_006510	chr6_ssto_hap7,chr6_ssto_hap7	+,-	LOC100129636,TRIM27	124156,12009
chr6:28879256-28879977	chr6_apd_hap1	+	182697	183210	False	NM_001195202,NM_006510	chr6_apd_hap1,chr6_apd_hap1	+,-	LOC100129636,TRIM27	124231,12010
chr6:28879256-28879977	chr6_cox_hap2	+	402318	402831	False	NM_001195202,NM_006510	chr6_cox_hap2,chr6_cox_hap2	+,-	LOC100129636,TRIM27	119988,12015
chr10:91462947-91463305	chr10	+	91463059	91463327	True	NR_026835,NM_016195	chr10,chr10	-,+	FLJ37201,KIF20B	-5374,-1754
chr2:43902585-43903507	chr2	+	43902670	43903482	True	NM_001101330,NM_172069	chr2,chr2	-,+	LOC728819,PLEKHH2	29,-38292
chr6:86159053-86159288	chr6	+	86159082	86159278	True	NM_001204813,NM_002526,NM_020468	chr6,chr6,chr6	+,+,-	NT5E,NT5E,SNX14	23,23,144401
chr6:35420535-35420735	chr6	+	35420711	35420783	True	NM_003214,NM_021922	chr6,chr6	-,+	TEAD3,FANCE	44128,-624
chr12:120431064-120431797	chr12	+	120431064	120431816	True	NM_207311,NM_007174	chr12,chr12	+,-	CCDC64,CIT	-3469,-115972
chr14:23290617-23290867	chr14	+	23290764	23290910	True	NM_181307,NM_181304,NM_003982,NM_181306,NM_181305,NM_180982,NM_001126106,NM_001126105,NM_178336	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,+,-,+,+,+,-,-,+	MRPL52,MRPL52,SLC7A7,MRPL52,MRPL52,MRPL52,SLC7A7,SLC7A7,MRPL52	8181,8181,-5692,8181,8181,8181,-1750,-5692,8181
chr12:121022696-121023029	chr12	+	121022757	121022935	True	NM_014868,NM_015918,NM_198202	chr12,chr12,chr12	+,-,-	RNF10,POP5,POP5	-50676,-3560,-3556
chr16:74698619-74699065	chr16	+	74698668	74699006	True	NM_018124,NM_032268	chr16,chr16	-,+	RFWD3,ZNRF1	1823,333908
chr11:102743714-102744397	chr11	+	102743883	102744421	True	NM_002426,NM_001080463	chr11,chr11	-,+	MMP12,DYNC2H1	1400,235738
chr3:195311589-195313481	chr3	+	195311708	195313403	True	NM_001647,NR_003265	chr3,chr3	-,+	APOD,SDHAP2	-632,71506
chr5:111753847-111754363	chr5	+	111753910	111754278	True	NR_027706,NM_022140	chr5,chr5	+,-	FLJ11235,EPB41L4A	1001,782
chr12:121029616-121030106	chr12	+	121029703	121030137	True	NM_001033677,NM_198202	chr12,chr12	+,-	CABP1,POP5	48284,-10502
chrX:147058596-147059924	chrX	+	147058679	147059661	True	NM_152578,NR_024503	chrX,chrX	+,-	FMR1NB,FMR1-AS1	3187,-55003
chr9:118917320-118917962	chr9	+	118917325	118917863	True	NM_002581,NR_024032	chr9,chr9	+,-	PAPPA,C9orf27	-1305,-229948
chr15:63673593-63673846	chr15	+	63673598	63673842	True	NM_206925,NM_001218,NM_031301	chr15,chr15,chr15	-,-,+	CA12,CA12,APH1B	283,283,-103900
chr16:3355747-3355976	chr16	+	3355824	3356024	True	NM_153028,NM_033208	chr16,chr16	+,-	ZNF75A,TIGD7	-442,-385
chr7:4996400-4996719	chr7	+	4996430	4996518	True	NM_198403,NR_015449,NM_001100600	chr7,chr7,chr7	-,+,-	MMD2,RNF216L,MMD2	2376,17097,2376
chr10:135340869-135341072	chr10	+	135341007	135341125	True	NM_000773,NM_001143763	chr10,chr10	+,-	CYP2E1,SYCE1	-191,38069
chr7:105927297-105928171	chr7	+	105927466	105927865	True	NM_152750,NM_005746	chr7,chr7	+,-	CDHR3,NAMPT	-323873,-1828
chr19:14315837-14316116	chr19	+	14316001	14316135	True	NM_014921,NR_024282,NM_001008701	chr19,chr19,chr19	-,+,-	LPHN1,LOC113230,LPHN1	912,-132231,912
chr12:68644390-68644975	chr12	+	68644401	68645005	True	NM_020525,NM_001010942	chr12,chr12	-,+	IL22,RAP1B	2326,359646
chr4:15657101-15657413	chr4	+	15657154	15657460	True	NM_001193534,NM_001193535,NM_012161,NM_001145191,NR_036464	chr4,chr4,chr4,chr4,chr4	-,-,-,+,-	FBXL5,FBXL5,FBXL5,FAM200B,FBXL5	-119,-119,-119,25891,-119
chr2:129272495-129272922	chr2	+	129272528	129272952	True	NM_004807,NR_027671	chr2,chr2	-,+	HS6ST1,UGGT1	-196357,-423798
chr9:136603464-136604171	chr9	+	136603526	136604026	True	NM_007101,NM_000787,NM_001134707	chr9,chr9,chr9	-,+,-	SARDH,DBH,SARDH	1101,-102092,-47
chr1:150204974-150205464	chr1	+	150205133	150205329	True	NM_012113,NM_001136478,NM_001136479,NM_030920	chr1,chr1,chr1,chr1	+,-,-,-	CA14,ANP32E,ANP32E,ANP32E	24888,3225,1747,3225
chr6:42858888-42859089	chr6	+	42858938	42859046	True	NM_001008739,NM_198486	chr6,chr6	-,+	C6orf226,RPL7L1	-384,-11318
chr8:58190861-58191295	chr8	+	58190868	58191284	True	NR_026772,NM_017813	chr8,chr8	+,-	C8orf71,IMPAD1	817,-284441
chr22:31533903-31534124	chr22	+	31533954	31534164	True	NM_015715,NM_001002837	chr22,chr22	-,+	PLA2G3,INPP5J	2355,-15044
chr6:69343587-69344574	chr6	+	69343663	69344592	True	NM_018368,NM_001704	chr6,chr6	-,+	LMBRD1,BAI3	1162507,1039
chr12:128049429-128049974	chr12	+	128049458	128050008	True	NR_033970,NR_033987	chr12,chr12	-,+	LOC440117,FLJ37505	-690222,316153
chr13:96738505-96739000	chr13	+	96738537	96739035	True	NM_153456,NM_020121	chr13,chr13	+,-	HS6ST3,UGGT2	4057,-32801
chr20:1592210-1592444	chr20	+	1592270	1592484	True	NM_001135844,NM_001083910,NM_006065,NM_001040022	chr20,chr20,chr20,chr20	-,-,-,+	SIRPB1,SIRPB1,SIRPB1,SIRPA	8255,8255,8255,282328
chr15:25429406-25430321	chr15	+	25429547	25430259	True	NR_003358,NR_003296,NR_003351,NR_003305,NR_003344,NR_003298,NR_003299,NM_130838,NR_003300,NR_003301,NR_003302,NR_003303,NR_003304,NR_003297,NR_003306,NR_003295	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,-,+,+,+,+,+,+,+,+	SNORD115-43,SNORD115-4,SNORD115-36,SNORD115-13,SNORD115-29,SNORD115-6,SNORD115-7,UBE3A,SNORD115-8,SNORD115-9,SNORD115-10,SNORD115-11,SNORD115-12,SNORD115-5,SNORD115-14,SNORD115-3	4301,-7619,4301,8208,4301,-3954,-2066,220444,-145,518,518,4301,518,521,9808,-9524
chr10:1574183-1574934	chr10	+	1574182	1574902	True	NR_033387,NM_018702	chr10,chr10	+,-	NCRNA00168,ADARB2	-5416,204866
chr16:66400387-66401002	chr16	+	66400422	66400962	True	NM_001795,NM_001172643	chr16,chr16	+,-	CDH5,TK2	52,183282
chr2:29032310-29033006	chr2	+	29032343	29032678	True	NM_182756,NM_001142634,NM_001008779,NM_017910	chr2,chr2,chr2,chr2	+,+,+,-	SPDYA,SPDYA,SPDYA,TRMT61B	1021,1021,6184,60554
chr13:29070593-29071011	chr13	+	29070700	29071024	True	NM_015932,NM_001159920,NM_001160031,NM_001160030,NM_002019	chr13,chr13,chr13,chr13,chr13	+,-,-,-,-	POMP,FLT1,FLT1,FLT1,FLT1	162116,-1435,-1435,-1435,-1435
chr10:31270729-31271121	chr10	+	31270835	31271019	True	NM_001143769,NM_001174093	chr10,chr10	-,+	ZNF438,ZEB1	17485,337081
chr22:32142873-32143515	chr22	+	32143423	32143560	True	NM_001007188,NM_014662,NM_001136029,NM_173566	chr22,chr22,chr22,chr22	+,+,+,-	DEPDC5,DEPDC5,DEPDC5,PRR14L	6508,6508,7292,2615
chr1:45804728-45805110	chr1	+	45804731	45804882	True	NM_001128425,NM_012222,NM_025077,NM_001048174,NM_001048173,NM_001048172,NM_001048171	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,+,-,-,-,-	MUTYH,MUTYH,TOE1,MUTYH,MUTYH,MUTYH,MUTYH	1313,1313,459,800,958,958,1313
chr6:15001798-15002187	chr6	+	15001857	15002168	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	244358,661172
chr9:116062991-116064935	chr9	+	116063322	116064851	True	NM_145051,NM_004697	chr9,chr9	-,+	RNF183,PRPF4	-2002,-25400
chr8:28352493-28352802	chr8	+	28352581	28352841	True	NM_017412,NR_036250,NM_172366,NM_145866	chr8,chr8,chr8,chr8	+,-,-,+	FZD3,MIR4288,FBXO16,FZD3	-910,9908,-4797,-910
chr5:150946642-150946860	chr5	+	150946665	150946821	True	NM_001447,NM_078483	chr5,chr5	-,+	FAT2,SLC36A1	1734,-119567
chr11:50371824-50372172	chr11	+	50371823	50372199	True	NR_024504,NR_003034	chr11,chr11	+,-	LOC646813,LOC441601	-3556,-114190
chr5:55291156-55291523	chr5	+	55291305	55291503	True	NM_002184,NM_001190981,NM_175767,NM_139017	chr5,chr5,chr5,chr5	-,-,-,+	IL6ST,IL6ST,IL6ST,IL31RA	-484,-484,-484,-144022
chr5:138212883-138213175	chr5	+	138212901	138213055	True	NM_015564,NM_001903	chr5,chr5	-,+	LRRTM2,CTNNA1	-1844,-123849
chr8:33334048-33335163	chr8	+	33334396	33335201	True	NM_032509,NM_032664	chr8,chr8	+,-	MAK16,FUT10	7483,-3732
chr11:64903789-64904574	chr11	+	64903851	64904407	True	NM_032431,NM_172230,NR_037568	chr11,chr11,chr11	-,-,+	SYVN1,SYVN1,MRPL49	-1848,-1848,-14194
chr11:75380511-75381019	chr11	+	75380551	75380967	True	NM_033063,NM_025098,NM_207577	chr11,chr11,chr11	-,+,-	MAP6,MOGAT2,MAP6	-1072,47966,-1072
chr13:51621793-51622630	chr13	+	51621796	51622596	True	NR_003923,NM_001142279	chr13,chr13	-,+	GUCY1B2,RNASEH2B	17747,-138033
chr13:39549936-39550462	chr13	+	39550145	39550429	True	NM_001012754,NM_001144033	chr13,chr13	+,-	NHLRC3,STOML3	62025,14617
chr11:102961986-102962429	chr11	+	102961986	102962405	True	NM_001080463,NM_032299	chr11,chr11	+,-	DYNC2H1,DCUN1D5	17754,589
chr6:3754202-3754638	chr6	+	3754386	3754604	True	NM_183373,NM_012135	chr6,chr6	-,+	C6orf145,FAM50B	-2140,95027
chr11:60294466-60295200	chr11	+	60294550	60295014	True	NM_001100909,NM_004778	chr11,chr11	+,-	MS4A13,GPR44	-11722,328486
chr4:142142246-142142466	chr4	+	142142416	142142514	True	NM_020724,NM_014487	chr4,chr4	-,+	RNF150,ZNF330	-87800,-418
chr16:10671840-10673391	chr16	+	10671940	10673345	True	NM_024997,NM_001424	chr16,chr16	+,-	ATF7IP2,EMP2	-149266,1252
chr17:18164293-18164579	chr17	+	18164353	18164531	True	NM_001144900,NM_002018,NM_148886,NM_139162	chr17,chr17,chr17,chr17	+,-,+,+	SMCR7,FLII,SMCR7,SMCR7	-556,-2298,20,-556
chr19:30863273-30864658	chr19	+	30863328	30864627	True	NM_014717,NM_031448	chr19,chr19	+,-	ZNF536,C19orf12	-51,-656876
chrX:47373369-47375013	chrX	+	47373411	47374743	True	NM_001654,NM_153380	chrX,chrX	+,-	ARAF,ZNF41	45772,-31066
chr3:52569687-52570414	chr3	+	52569864	52570321	True	NM_001124767,NM_001134231,NM_022908	chr3,chr3,chr3	+,-,-	C3orf78,NT5DC2,NT5DC2	299,-2071,-771
chr19:15564284-15564975	chr19	+	15564706	15564854	True	NR_031716,NM_021241	chr19,chr19	+,-	MIR1470,WIZ	-4400,-3944
chr8:127597066-127598367	chr8	+	127597089	127598256	True	NM_001159542,NM_174911	chr8,chr8	+,-	POU5F1B,FAM84B	829600,-26378
chr1:19812986-19813788	chr1	+	19813092	19813622	True	NM_001032363,NM_004930	chr1,chr1	+,-	C1orf151,CAPZB	109848,-1026
chr13:29600995-29601973	chr13	+	29601034	29602017	True	NM_181785,NM_001033602	chr13,chr13	-,+	SLC46A3,MTUS2	-307884,-2352
chr5:150020115-150020336	chr5	+	150020176	150020346	True	NM_018047,NM_007286,NM_001109974	chr5,chr5,chr5	-,+,+	RBM22,SYNPO,SYNPO	60373,-21,-21
chr21:45583805-45584961	chr21	+	45583903	45584855	True	NM_198155,NM_015259	chr21,chr21	+,-	C21orf33,ICOSLG	-30460,76029
chr19:48440656-48441414	chr19	+	48441345	48441427	True	NR_024219,NR_024218,NR_024217,NR_024216,NR_024220,NM_003167,NR_004437,NR_004436,NR_004435	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,-,+,+,+	SNAR-C5,SNAR-C4,SNAR-C2,SNAR-A13,SNAR-C1,SULT2A1,SNAR-A12,SNAR-A2,SNAR-A1	-9331,1370,-9331,6751,-9331,-51691,6751,-3968,-3968
chr19:48440656-48441414	chr19	+	48414861	48414943	False	NR_024219,NR_024220,NR_024217,NR_024216,NM_003167,NR_004437,NR_004436,NR_004435	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,-,+,+,+	SNAR-C5,SNAR-C1,SNAR-C2,SNAR-A13,SULT2A1,SNAR-A12,SNAR-A2,SNAR-A1	1364,1364,1364,-3987,-25207,-3987,6742,6742
chr19:48440656-48441414	chr19	+	48430630	48430712	False	NR_024219,NR_024220,NR_024223,NR_024224,NR_024225,NR_024226,NR_024227,NR_024228,NR_024229,NR_024215,NR_024214,NR_024217,NM_003167,NR_004436,NR_004435,NR_024242	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,+,+,+,+,+,+,+,-,+,+,+	SNAR-C5,SNAR-C1,SNAR-A5,SNAR-A7,SNAR-A11,SNAR-A9,SNAR-A6,SNAR-A8,SNAR-A10,SNAR-A4,SNAR-A3,SNAR-C2,SULT2A1,SNAR-A2,SNAR-A1,SNAR-A14	1362,1362,-3655,-3655,-3655,-3655,-3655,-3655,-3655,-3655,-3655,1362,-40976,6725,6725,-3655
chr21:45972196-45972593	chr21	+	45972452	45972582	True	NM_198696,NM_198687,NM_198693	chr21,chr21,chr21	-,+,-	KRTAP10-3,KRTAP10-4,KRTAP10-2	6111,21023,-1064
chr12:6689588-6691059	chr12	+	6690191	6691018	True	NR_003012,NM_002046	chr12,chr12	-,+	SCARNA11,GAPDH	85,-46585
chr5:122425369-122425576	chr5	+	122425503	122425563	True	NM_001136239,NM_000943	chr5,chr5	+,-	PRDM6,PPIC	-713,-53078
chr3:33158453-33159038	chr3	+	33158694	33159076	True	NM_001135602,NM_006371	chr3,chr3	-,+	GLB1,CRTAP	-20000,-3295
chr1:166843432-166845039	chr1	+	166843697	166844967	True	NM_017542,NM_053053	chr1,chr1	+,-	POGK,TADA1	-35028,737
chr11:113258837-113259122	chr11	+	113258962	113259086	True	NM_178510,NR_036183	chr11,chr11	+,-	ANKK1,MIR4301	-507,61774
chr17:1548555-1548814	chr17	+	1548718	1548858	True	NM_001163673,NR_028075,NM_031430,NR_028076,NM_145352,NM_145350,NM_003693	chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,-,-,-,-	WDR81,SCARF1,RILP,SCARF1,SCARF1,SCARF1,SCARF1	70958,233,4584,233,233,233,233
chr6:41606569-41607093	chr6	+	41606681	41607035	True	NM_005586,NM_007162	chr6,chr6	+,-	MDFI,TFEB	-537,95813
chr1:120188168-120188743	chr1	+	120188168	120188760	True	NM_006623,NM_001080470	chr1,chr1	+,-	PHGDH,ZNF697	65658,1680
chr8:42013175-42013533	chr8	+	42013182	42013534	True	NM_006803,NM_001134296,NM_000930	chr8,chr8,chr8	+,+,-	AP3M2,AP3M2,PLAT	-2776,-2776,51718
chr9:132517117-132518111	chr9	+	132517453	132518088	True	NM_014506,NM_004878	chr9,chr9	+,-	TOR1B,PTGES	47343,-2109
chr1:241714038-241714355	chr1	+	241714071	241714305	True	NM_003679,NM_000143	chr1,chr1	+,-	KMO,FH	-18449,-30986
chrX:16967689-16969023	chrX	+	16967922	16968797	True	NM_004726,NM_002893,NM_001080975	chrX,chrX,chrX	+,-,+	REPS2,RBBP7,REPS2	-3159,-79388,-3159
chr17:18580172-18580875	chr17	+	18580423	18580703	True	NM_001145045,NM_001037330,NR_026718	chr17,chr17,chr17	-,+,-	ZNF286B,TRIM16L,FOXO3B	4919,44698,-3929
chr5:137366595-137367296	chr5	+	137366766	137367020	True	NR_037900,NM_001101801,NM_001101800,NM_016603	chr5,chr5,chr5,chr5	+,-,-,-	LOC100130172,FAM13B,FAM13B,FAM13B	1442,1842,1842,1842
chr7:104568386-104569246	chr7	+	104568391	104569209	True	NM_018682,NR_027374	chr7,chr7	+,-	MLL5,LOC723809	85427,-1299
chr1:208421813-208422522	chr1	+	208421898	208422555	True	NR_026817,NM_025179	chr1,chr1	+,-	LOC148696,PLXNA2	-430231,-4233
chrX:129300992-129301571	chrX	+	129301000	129301451	True	NM_001130847,NM_004794,NM_004208,NM_145812,NM_145813	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	AIFM1,RAB33A,AIFM1,AIFM1,AIFM1	-1139,4321,-1139,-1139,-1139
chr15:41247302-41247546	chr15	+	41247385	41247487	True	NM_024111,NM_133639,NM_001142776	chr15,chr15,chr15	+,-,+	CHAC1,RHOV,CHAC1	-1800,-80898,-1800
chr13:41372764-41373213	chr13	+	41372917	41373235	True	NM_005830,NM_014252	chr13,chr13	-,+	MRPS31,SLC25A15	-27570,-9421
chr17:54890494-54891054	chr17	+	54890503	54891036	True	NM_001085430,NM_003647	chr17,chr17	-,+	C17orf67,DGKE	2264,20423
chr16:227144-228315	chr16	+	227390	228361	True	NM_001077350,NM_000558,NM_000517,NM_005331	chr16,chr16,chr16,chr16	-,+,+,+	NPRL3,HBA1,HBA2,HBQ1	-38718,-762,-4595,1971
chr1:110578929-110579535	chr1	+	110579095	110579431	True	NM_033088,NM_006492	chr1,chr1	+,-	FAM40A,ALX3	-1918,33949
chr2:241835336-241835868	chr2	+	241835550	241835826	True	NM_024861,NM_001085437,NM_000030	chr2,chr2,chr2	-,-,+	C2orf54,C2orf54,AGXT	-4098,9,-27441
chr22:41075642-41076461	chr22	+	41076087	41076509	True	NM_020831,NM_005297	chr22,chr22	-,+	MKL1,MCHR1	-43397,-956
chr1:53527335-53527598	chr1	+	53527399	53527589	True	NM_153703,NM_006671,NM_001199082,NM_001199080,NM_001199081	chr1,chr1,chr1,chr1,chr1	+,-,+,+,+	PODN,SLC1A7,PODN,PODN,PODN	134,80750,134,134,295
chr19:54694481-54694714	chr19	+	54694497	54694695	True	NM_001146056,NM_001146082,NM_001146083,NM_024075,NM_024298,NM_001077446	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,+,-,+	MBOAT7,MBOAT7,MBOAT7,TSEN34,MBOAT7,TSEN34	-764,-764,-764,-429,-764,408
chr16:18492237-18493254	chr16	+	18492602	18493199	True	NR_036142,NR_003569,NR_036141,NR_036144	chr16,chr16,chr16,chr16	-,+,-,-	MIR3180-2,ABCC6P1,MIR3180-1,MIR3180-3	2975,89370,2979,2979
chr16:18492237-18493254	chr16	+	2182749	2182800	False	NM_001009944,NM_000296,NR_037467,NM_014353	chr16,chr16,chr16,chr16	-,-,-,+	PKD1,PKD1,MIR3180-5,RAB26	3150,3150,3381,15850
chr16:18492237-18493254	chr16	-	16406661	16407258	False	NR_036142,NR_036447,NR_036141,NM_001079528,NR_036144	chr16,chr16,chr16,chr16,chr16	+,+,+,-,+	MIR3180-2,PKD1P1,MIR3180-1,ABCC6,MIR3180-3	-2976,4207,-2980,-89333,-2980
chr16:18492237-18493254	chr16	+	15245363	15245506	False	NM_015027,NR_037466	chr16,chr16	+,-	PDXDC1,MIR3180-4	-176581,3404
chr16:18492237-18493254	chr16	-	15008461	15008604	False	NR_036142,NR_023387,NR_036141,NR_036144	chr16,chr16,chr16,chr16	+,-,+,+	MIR3180-2,ABCC6P2,MIR3180-1,MIR3180-3	-3432,-89902,-3436,-3436
chr6:89851613-89852467	chr6	+	89851837	89852255	True	NM_001010853,NM_080743	chr6,chr6	+,-	PM20D2,SRSF12	3513,-24037
chr22:31886550-31887855	chr22	+	31886610	31887904	True	NM_001164501,NM_014775,NM_001007467,NM_001164502,NM_019843	chr22,chr22,chr22,chr22,chr22	-,+,+,-,-	EIF4ENIF1,SFI1,SFI1,EIF4ENIF1,EIF4ENIF1	-1063,4356,4356,-736,-736
chr12:99040911-99041441	chr12	+	99041061	99041137	True	NM_001160,NM_181869,NM_181868,NM_181861,NM_153687,NM_013229,NM_201613,NM_201612	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,+,+,-,+,-,-	APAF1,APAF1,APAF1,APAF1,IKBIP,APAF1,IKBIP,IKBIP	-2040,-2040,-2040,-2040,-2472,-2040,-2472,-2472
chr5:180231942-180233007	chr5	+	180231964	180232901	True	NM_001114617,NM_001114618,NM_001114619,NR_027183,NM_002406,NM_001114620	chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,+,-,-	MGAT1,MGAT1,MGAT1,LOC729678,MGAT1,MGAT1	4296,3976,-1062,24057,-1916,-1062
chr16:73082533-73083080	chr16	+	73082596	73083026	True	NM_006885,NM_001164766,NR_027756	chr16,chr16,chr16	-,-,+	ZFHX3,ZFHX3,HTA	-322,9558,43221
chr2:232646133-232646366	chr2	+	232646138	232646308	True	NM_022730,NM_002601	chr2,chr2	+,-	COPS7B,PDE6D	4853,-164
chr6:14911570-14912663	chr6	+	14911880	14912526	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	334000,750813
chr7:33080494-33081804	chr7	+	33080536	33081435	True	NM_016489,NM_001166118,NM_007270	chr7,chr7,chr7	-,-,+	NT5C3,NT5C3,FKBP9	-14,-15,-83582
chr1:1362656-1362922	chr1	+	1362655	1362721	True	NM_199121,NM_022834,NR_026871,NM_001146685,NM_001145210	chr1,chr1,chr1,chr1,chr1	+,+,-,+,-	VWA1,VWA1,LOC441869,TMEM88B,LOC441869	8181,8181,-6005,-1198,-6005
chr18:70531174-70532064	chr18	+	70531415	70532035	True	NM_014177,NM_138999,NM_001201465,NM_138966	chr18,chr18,chr18,chr18	+,-,-,-	C18orf55,NETO1,NETO1,NETO1	1283710,949,2825,2825
chr1:28424407-28426130	chr1	+	28424467	28426078	True	NR_027268,NM_018053,NM_001990,NM_016311	chr1,chr1,chr1,chr1	-,+,-,+	LOC653566,XKR8,EYA3,ATPIF1	-1398,-138025,-9319,136523
chr2:177052973-177053199	chr2	+	177052977	177053179	True	NM_024501,NR_033979	chr2,chr2	+,-	HOXD1,LOC401022	127,557
chr2:85556290-85557843	chr2	+	85556685	85557897	True	NM_001135021,NM_006464	chr2,chr2	+,-	ELMOD3,TGOLN2	23945,-1311
chr1:112532193-112532419	chr1	+	112532240	112532326	True	NM_172198,NM_007204,NM_004980	chr1,chr1,chr1	-,+,-	KCND3,DDX20,KCND3	-463,-234101,-463
chr3:62811123-62811343	chr3	+	62811178	62811389	True	NR_027104,NM_003716	chr3,chr3	+,-	LOC285401,CADPS	276974,49726
chr3:57741496-57742022	chr3	+	57741530	57742042	True	NM_007159,NM_152678	chr3,chr3	+,-	SLMAP,FAM116A	1131,-62714
chr19:39695009-39695419	chr19	+	39695041	39695185	True	NM_001080468,NM_001001414	chr19,chr19	-,+	SYCN,NCCRP1	-135,-7488
chr20:37101951-37102320	chr20	+	37102001	37102359	True	NM_020336,NR_027241	chr20,chr20	+,-	RALGAPB,LOC388796	-566,-37983
chr11:70050440-70051589	chr11	+	70050444	70051613	True	NM_003824,NM_005247	chr11,chr11	+,-	FADD,FGF3	-1226,-416252
chr15:45490881-45491092	chr15	+	45490908	45491038	True	NM_138356,NM_004212	chr15,chr15	-,+	SHF,SLC28A2	2385,53389
chr2:108448988-108450214	chr2	+	108449534	108449836	True	NM_182588,NR_024439	chr2,chr2	+,-	RGPD4,LOC729121	-6197,-6951
chr2:108448988-108450214	chr2	+	109341260	109341706	False	NM_022336,NM_006267	chr2,chr2	-,+	EDAR,RANBP2	264568,-5770
chr1:156216471-156216818	chr1	+	156216505	156216651	True	NM_024897,NM_199173,NM_198406	chr1,chr1,chr1	-,+,-	PAQR6,BGLAP,PAQR6	1242,-4605,1191
chr6:158241195-158241799	chr6	+	158241514	158241715	True	NM_016224,NM_032861	chr6,chr6	+,-	SNX9,SERAC1	2578,347656
chr10:120861805-120862309	chr10	+	120861892	120862142	True	NM_207009,NR_027141,NM_003750	chr10,chr10,chr10	+,+,-	FAM45A,FAM45B,EIF3A	1468,1486,-21558
chr1:149370882-149371594	chr1	+	149370956	149371546	True	NR_027484,NM_001024599	chr1,chr1	+,-	FCGR1C,HIST2H2BF	-1713,27739
chr1:149370882-149371594	chr1	-	120934131	120934233	False	NM_001004340,NR_027337,NM_001017986	chr1,chr1,chr1	-,+,-	FCGR1B,HIST2H2BA,FCGR1B	1762,-28148,1762
chr1:149370882-149371594	chr1	+	149755958	149756475	False	NM_001161334,NM_000566	chr1,chr1	-,+	HIST2H2BF,FCGR1A	27509,-1760
chr20:44212432-44213771	chr20	+	44212458	44213816	True	NM_080753,NM_181510,NM_130896	chr20,chr20,chr20	+,-,-	WFDC10A,WFDC8,WFDC8	44568,-4493,-4493
chr1:2407267-2407507	chr1	+	2407470	2407530	True	NM_014638,NM_018216	chr1,chr1	+,-	PLCH2,PANK4	223,50555
chr22:29276360-29277254	chr22	+	29276602	29276995	True	NM_005080,NM_032173	chr22,chr22	-,+	XBP1,ZNRF3	-80042,2894
chr20:62715623-62716111	chr20	+	62715790	62716044	True	NM_182647,NM_001007125,NM_001039467,NM_001200019,NM_000913,NM_005873	chr20,chr20,chr20,chr20,chr20,chr20	+,-,-,+,+,-	OPRL1,C20orf201,RGS19,OPRL1,OPRL1,RGS19	-4370,-78,-4466,324,-4370,-4945
chr14:23400139-23400703	chr14	+	23400223	23400289	True	NM_006109,NM_173527,NM_001039619	chr14,chr14,chr14	-,+,-	PRMT5,REM2,PRMT5	-1562,-47843,-1562
chr5:172072412-172073399	chr5	+	172072555	172073364	True	NM_001142651,NM_004417	chr5,chr5	+,-	NEURL1B,DUSP1	-4330,124890
chr7:123672428-123672813	chr7	+	123672496	123672802	True	NM_001174046,NM_001136002	chr7,chr7	+,-	SPAM1,TMEM229A	-106638,771
chr13:95249597-95251181	chr13	+	95249632	95250580	True	NM_014305,NM_180989	chr13,chr13	-,+	TGDS,GPR180	-1121,3523
chr13:24884582-24885176	chr13	+	24884582	24885206	True	NM_178540,NM_006437	chr13,chr13	+,-	C1QTNF9,PARP4	-927,201792
chr7:91874977-91875238	chr7	+	91874984	91875287	True	NM_019004,NM_004912,NM_194456,NM_194454,NM_194455,NM_001013406	chr7,chr7,chr7,chr7,chr7,chr7	+,-,-,-,-,-	ANKIB1,KRIT1,KRIT1,KRIT1,KRIT1,KRIT1	260,-25,177,-9,177,-9
chr12:9259270-9261014	chr12	+	9259539	9260426	True	NM_000014,NR_026971	chr12,chr12	-,+	A2M,LOC144571	8195,-41817
chr10:13627827-13628788	chr10	+	13628443	13628826	True	NM_003675,NM_001100912	chr10,chr10	+,-	PRPF18,BEND7	112,-83467
chr14:71995549-71996681	chr14	+	71996020	71996638	True	NM_015556,NM_033141	chr14,chr14	+,-	SIPA1L1,MAP3K9	-36,-720132
chr2:113299620-113300002	chr2	+	113299684	113300044	True	NM_001137604,NR_033871,NM_019014	chr2,chr2,chr2	+,-,+	POLR1B,FLJ42351,POLR1B	-243,101763,-243
chr4:109548798-109549221	chr4	+	109549033	109549267	True	NM_000995,NM_033625,NR_026968	chr4,chr4,chr4	+,+,-	RPL34,RPL34,LOC285456	-7369,-7342,-7420
chr12:39834310-39836241	chr12	+	39834332	39836004	True	NM_001173464,NM_001173465,NM_001031748,NM_017641,NM_001173463	chr12,chr12,chr12,chr12,chr12	-,-,+,-,-	KIF21A,KIF21A,C12orf40,KIF21A,KIF21A	1238,1238,183967,1238,1238
chr19:8119607-8120095	chr19	+	8119607	8119707	True	NM_005624,NM_001419,NM_001201359	chr19,chr19,chr19	+,-,+	CCL25,ELAVL1,CCL25	-2012,-49078,-2012
chr9:127212668-127213038	chr9	+	127212736	127213012	True	NM_002799,NM_001161808	chr9,chr9	-,+	PSMB7,GPR144	-35015,410
chr12:114397952-114398447	chr12	+	114398067	114398376	True	NM_016196,NM_001146699,NM_001146698,NM_138432	chr12,chr12,chr12,chr12	-,-,-,+	RBM19,RBM19,RBM19,SDSL	5857,5857,5857,-537903
chr7:72297841-72298522	chr7	+	72298245	72298529	True	NR_001588,NR_024110,NR_024111,NR_024109,NM_001145441,NM_001145440	chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,-,-	SBDSP1,SBDSP1,SBDSP1,SBDSP1,TYW1B,TYW1B	1422,1422,1422,1422,334,334
chr19:49663467-49664211	chr19	+	49663787	49664239	True	NM_001195227,NM_017636,NM_002152	chr19,chr19,chr19	+,+,-	TRPM4,TRPM4,HRC	-2831,-2831,-5106
chr19:7809629-7810087	chr19	+	7809629	7810057	True	NM_021155,NM_001144893,NM_001144897,NM_001144896,NM_001144895,NM_001144894,NR_026692,NM_001144899,NM_001144904	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,-,+	CD209,CD209,CD209,CD209,CD209,CD209,CD209,CD209,CLEC4M	2457,2457,2457,2457,2457,2457,2457,2457,17977
chr2:42588774-42590137	chr2	+	42588823	42589887	True	NM_019063,NM_004718	chr2,chr2	+,-	EML4,COX7A2L	-192384,-467
chr1:76038730-76038951	chr1	+	76038746	76038918	True	NM_000016,NM_001130058	chr1,chr1	+,-	ACADM,SLC44A5	151124,37941
chr20:57524278-57525124	chr20	+	57524304	57524694	True	NM_001336,NM_198976	chr20,chr20	-,+	CTSZ,TH1L	57671,31616
chr16:128706-128943	chr16	+	128808	128942	True	NM_001015052,NM_022450,NM_002434,NM_001015054	chr16,chr16,chr16,chr16	+,-,+,+	MPG,RHBDF1,MPG,MPG	-690,-6179,-690,-1841
chr17:39017631-39018411	chr17	+	39017630	39018283	True	NM_000223,NM_001195386	chr17,chr17	-,+	KRT12,TMEM99	5235,-42244
chr14:71274129-71274973	chr14	+	71274490	71274986	True	NM_033141,NM_014982	chr14,chr14	-,+	MAP3K9,PCNX	952,99135
chr8:103426307-103427132	chr8	+	103426433	103427136	True	NM_024410,NM_015902	chr8,chr8	+,-	ODF1,UBR5	136711,-1516
chr9:98278755-98279018	chr9	+	98278771	98278896	True	NM_001010895,NM_001083607,NM_001083602,NM_001083603,NM_001083604,NM_001083605,NM_001083606,NM_000264	chr9,chr9,chr9,chr9,chr9,chr9,chr9,chr9	+,-,-,-,-,-,-,-	C9orf102,PTCH1,PTCH1,PTCH1,PTCH1,PTCH1,PTCH1,PTCH1	359003,-9290,401,401,-8449,-8449,-9072,-7940
chr1:159506619-159508487	chr1	+	159506751	159507689	True	NM_001004469,NM_001639	chr1,chr1	-,+	OR10J5,APCS	-954,49926
chr22:19118828-19119313	chr22	+	19118916	19119304	True	NM_053006,NM_005137,NM_001173533,NM_001184781,NM_001173534,NR_033674	chr22,chr22,chr22,chr22,chr22,chr22	+,-,-,-,-,-	TSSK2,DGCR2,DGCR2,DGCR2,DGCR2,DGCR2	-646,-8949,-8949,-8949,-8949,-8949
chr19:798981-799339	chr19	+	799001	799263	True	NM_024888,NM_175847,NM_031991,NM_031990,NM_002819	chr19,chr19,chr19,chr19,chr19	-,+,+,+,+	LPPR3,PTBP1,PTBP1,PTBP1,PTBP1	22739,-1660,-1660,-1660,-1660
chr17:38216656-38217424	chr17	+	38216981	38217403	True	NM_014815,NM_001079518,NM_199334,NM_001190919,NM_001190918,NM_003250	chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,+,+,+	MED24,MED24,THRA,THRA,THRA,THRA	-6092,-6092,1664,1042,1664,1664
chr6:117738207-117739623	chr6	+	117738311	117739662	True	NM_173674,NM_002944	chr6,chr6	+,-	DCBLD1,ROS1	64157,7407
chr14:101293012-101293566	chr14	+	101293073	101293519	True	NR_003531,NR_003530,NR_033360,NR_002766,NR_033358,NR_033359,NM_001134888	chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,+,+,+,-	MEG3,MEG3,MEG3,MEG3,MEG3,MEG3,RTL1	-679,-679,-679,-679,-679,-679,57715
chr20:18486063-18486621	chr20	+	18486271	18486479	True	NM_006606,NM_006363,NM_032986,NM_032985,NM_001172746,NM_001172745	chr20,chr20,chr20,chr20,chr20,chr20	-,+,+,+,+,+	RBBP9,SEC23B,SEC23B,SEC23B,SEC23B,SEC23B	-8384,1708,1708,1708,1730,2127
chr16:56452575-56452976	chr16	+	56452729	56452890	True	NM_018233,NM_001144	chr16,chr16	+,-	OGFOD1,AMFR	32533,6611
chr2:179666464-179667001	chr2	+	179666478	179667008	True	NM_133432,NM_133437,NM_003319,NM_019091,NM_133378,NM_133379	chr2,chr2,chr2,chr2,chr2,chr2	-,-,-,+,-,-	TTN,TTN,TTN,PLEKHA3,TTN,TTN	5192,5192,5192,-321337,5192,5192
chrX:49041834-49042715	chrX	+	49041885	49042458	True	NM_002668,NM_006150	chrX,chrX	+,-	PLP2,PRICKLE3	-13752,368
chr6:146921293-146922719	chr6	+	146921405	146922689	True	NM_024694,NR_003954	chr6,chr6	+,-	C6orf103,LOC729176	-1322,202321
chr15:76604573-76605230	chr15	+	76604730	76605260	True	NM_001127716,NM_145805,NM_000126	chr15,chr15,chr15	-,+,-	ETFA,ISL2,ETFA	-920,23886,-920
chr17:46871871-46872409	chr17	+	46871878	46872386	True	NM_005831,NM_173623	chr17,chr17	+,-	CALCOCO2,TTLL6	35985,-192
chr2:8018860-8019222	chr2	+	8019012	8019220	True	NM_002166,NR_015405	chr2,chr2	+,-	ID2,LOC339788	802892,97775
chr5:176437800-176438114	chr5	+	176437827	176437942	True	NM_001199297,NM_012279,NM_016290,NM_001199298	chr5,chr5,chr5,chr5	-,+,-,-	UIMC1,ZNF346,UIMC1,UIMC1	-4047,11754,-4384,-4032
chr2:219190021-219190926	chr2	+	219190406	219190962	True	NM_022572,NM_022152	chr2,chr2	+,-	PNKD,TMBIM1	-2556,-33126
chr15:89792844-89793762	chr15	+	89792948	89793264	True	NM_001113378,NM_000326,NM_018193	chr15,chr15,chr15	+,-,+	FANCI,RLBP1,FANCI	-5811,-28026,-5811
chr6:26529273-26531027	chr6	+	26529274	26530197	True	NM_006353,NR_026790,NM_024639	chr6,chr6,chr6	+,+,-	HMGN4,HCG11,ZNF322A	8374,-7391,129816
chr19:18436606-18437689	chr19	+	18436738	18437738	True	NM_017712,NM_012321	chr19,chr19	+,-	PGPEP1,LSM4	13669,-2737
chr8:87755253-87756526	chr8	+	87755294	87756572	True	NM_019098,NM_173538	chr8,chr8	-,+	CNGB3,CNBD1	-75,122103
chr1:143915077-143915291	chr1	+	143915082	143915176	True	NM_207418,NR_034178	chr1,chr1	-,+	FAM72D,SRGAP2P2	-1939,571
chr1:143915077-143915291	chr1	-	120836942	120837036	False	NM_001004340,NM_001100910	chr1,chr1	-,+	FCGR1B,FAM72B	98958,1968
chr1:143915077-143915291	chr1	-	206136423	206136517	False	NM_001123168,NM_001007544	chr1,chr1	+,-	FAM72A,C1orf186	2393,152180
chrX:68727383-68728368	chrX	+	68727394	68728280	True	NM_145119,NM_015686	chrX,chrX	-,+	PJA1,FAM155B	-342029,-2367
chr3:128720947-128721174	chr3	+	128720956	128721222	True	NM_020741,NM_024768	chr3,chr3	-,+	KIAA1257,CCDC48	-7970,-535
chr2:26784359-26785128	chr2	+	26784374	26785154	True	NM_001105519,NM_194248	chr2,chr2	+,-	C2orf70,OTOF	326,-2808
chrX:49685065-49685610	chrX	+	49685087	49685658	True	NM_001127898,NM_001127899,NR_026742	chrX,chrX,chrX	+,+,-	CLCN5,CLCN5,LOC158572	1566,1566,-41128
chr9:19292368-19292634	chr9	+	19292368	19292540	True	NM_001010,NM_017925	chr9,chr9	-,+	RPS6,DENND4C	87751,-1676
chr13:33761351-33762157	chr13	+	33761438	33762201	True	NM_004795,NM_178007	chr13,chr13	+,-	KL,STARD13	-170937,-1222
chr3:136539090-136540379	chr3	+	136539094	136540182	True	NM_001097599,NM_005862,NM_001097600,NM_025246	chr3,chr3,chr3,chr3	+,-,+,+	TMEM22,STAG1,TMEM22,TMEM22	-1284,-67849,-1284,-1284
chr20:24932974-24933466	chr20	+	24932978	24933502	True	NM_003650,NM_020531	chr20,chr20	+,-	CST7,C20orf3	-3163,39973
chr1:3816994-3817586	chr1	+	3817031	3817623	True	NR_024455,NM_207356	chr1,chr1	+,-	LOC100133612,C1orf174	-114,-174
chr1:26600107-26601930	chr1	+	26600684	26601621	True	NM_031286,NM_001077262	chr1,chr1	+,-	SH3BGRL3,UBXN11	4591,31625
chr3:121608574-121609405	chr3	+	121608724	121609214	True	NM_021082,NM_001023571,NM_001145998	chr3,chr3,chr3	+,-,+	SLC15A2,IQCB1,SLC15A2	3956,-54798,3956
chr2:241494750-241496547	chr2	+	241495020	241496555	True	NM_001033575,NM_017844,NM_016552	chr2,chr2,chr2	+,-,-	DUSP28,ANKMY1,ANKMY1	2915,901,901
chr18:5542874-5543081	chr18	+	5542892	5543064	True	NM_012307,NR_015389	chr18,chr18	-,+	EPB41L3,LOC339290	972,-304844
chr19:33165900-33166199	chr19	+	33165953	33166193	True	NM_207391,NM_032139	chr19,chr19	+,-	RGS9BP,ANKRD27	119,-29
chr12:102000288-102000892	chr12	+	102000406	102000593	True	NM_206821,NM_001177948	chr12,chr12	+,-	MYBPC1,SYCP3	-11718,132718
chr8:118161657-118162935	chr8	+	118161656	118162845	True	NM_173851,NM_006265	chr8,chr8	+,-	SLC30A8,RAD21	-14373,-274551
chr5:180671493-180672796	chr5	+	180671816	180672772	True	NR_002592,NM_006098,NR_002591,NM_201627	chr5,chr5,chr5,chr5	-,-,-,+	SNORD96A,GNB2L1,SNORD95,TRIM41	-2927,-910,-1440,-21561
chr19:57109867-57110113	chr19	+	57109897	57110117	True	NM_021216,NM_001005850	chr19,chr19	+,-	ZNF71,ZNF835	-3284,74181
chr1:154167098-154168515	chr1	+	154167119	154168449	True	NR_030600,NM_152263,NM_001127320	chr1,chr1,chr1	-,-,+	MIR190B,TPM3,UBAP2L	-900,-2510,24205
chr14:67969461-67969706	chr14	+	67969479	67969755	True	NM_020715,NM_182526	chr14,chr14	+,-	PLEKHH1,TMEM229B	30252,12316
chr21:42877636-42878478	chr21	+	42877710	42878364	True	NM_001178046,NM_001135099,NM_005656	chr21,chr21,chr21	+,-,-	MX1,TMPRSS2,TMPRSS2	-79658,1678,1771
chr19:42352588-42352895	chr19	+	42352689	42352840	True	NM_173506,NM_001040283	chr19,chr19	-,+	LYPD4,DMRTC2	-4181,-3658
chr6:159240752-159241991	chr6	+	159240778	159241648	True	NM_001111077,NM_003379,NM_001195032	chr6,chr6,chr6	-,-,+	EZR,EZR,C6orf99	-322,-1438,67970
chr16:20915617-20917527	chr16	+	20915636	20917294	True	NM_001128301,NM_001128302,NM_173475,NM_020424	chr16,chr16,chr16,chr16	+,+,-,+	LYRM1,LYRM1,DCUN1D3,LYRM1	-3619,-3619,-4075,-4137
chr9:39766375-39767268	chr9	+	39766433	39766799	True	NR_003528,NM_001085452	chr9,chr9	-,+	LOC653501,FAM75A1	-301907,118175
chr9:39766375-39767268	chr9	+	39237210	39237576	False	NM_033655,NM_001085452	chr9,chr9	-,+	CNTNAP3,FAM75A1	50774,118122
chr21:9961849-9963394	chr21	+	9962250	9962822	True	NM_001033515,NR_037458	chr21,chr21	-,+	LOC100132288,MIR3687	5813,-136102
chr9:139705459-139705789	chr9	+	139705462	139705746	True	NM_024718,NM_001173989,NM_001173988,NR_024580	chr9,chr9,chr9,chr9	+,+,+,-	C9orf86,C9orf86,C9orf86,LOC100131193	-3142,-3142,-3142,-2162
chr3:119814069-119814396	chr3	+	119814086	119814438	True	NM_002093,NM_001146156,NM_022002	chr3,chr3,chr3	-,-,+	GSK3B,GSK3B,NR1I2	-822,-822,-312580
chr16:4291858-4292115	chr16	+	4291863	4292141	True	NM_001098814,NM_032575	chr16,chr16	-,+	SRL,GLIS2	4,90083
chr21:45434445-45435586	chr21	+	45434620	45435187	True	NR_026961,NM_003274	chr21,chr21	-,+	LOC284837,TRAPPC10	-202172,-2472
chr9:138854406-138854774	chr9	+	138854431	138854815	True	NM_016172,NM_020822	chr9,chr9	-,+	UBAC1,KCNT1	-1205,-260453
chr15:68345505-68346378	chr15	+	68345509	68346340	True	NM_016166,NM_001031733	chr15,chr15	+,-	PIAS1,CALML4	231,152158
chrX:152687113-152689062	chrX	+	152687607	152689095	True	NM_001136273,NM_080701	chrX,chrX	+,-	ZFP92,TREX2	-3883,22900
chr10:82170552-82172506	chr10	+	82170648	82172485	True	NR_024572,NM_032333,NM_138812	chr10,chr10,chr10	+,+,-	C10orf58,C10orf58,DYDC1	1105,-2457,-54148
chr22:17678850-17679614	chr22	+	17679224	17679540	True	NM_177405,NR_024483	chr22,chr22	-,+	CECR1,CECR4	1055,-38996
chr15:89162841-89163802	chr15	+	89163086	89163601	True	NM_022767,NR_029606,NR_026645	chr15,chr15,chr15	+,+,-	AEN,MIR7-2,DET1	925,-8081,-73174
chr12:56619280-56619674	chr12	+	56619296	56619590	True	NM_173596,NM_194359,NM_005785,NM_194358,NM_001135195,NM_024068	chr12,chr12,chr12,chr12,chr12,chr12	+,-,-,-,+,+	SLC39A5,RNF41,RNF41,RNF41,SLC39A5,OBFC2B	4229,-3561,-3592,-3592,4910,-1222
chr1:4058374-4058995	chr1	+	4058485	4058971	True	NR_024455,NM_207356	chr1,chr1	+,-	LOC100133612,C1orf174	-241568,-241628
chr4:122619324-122619829	chr4	+	122619438	122619880	True	NR_024365,NM_001154	chr4,chr4	+,-	LOC100192379,ANXA5	65859,-1291
chr2:219221849-219222082	chr2	+	219221852	219222076	True	NM_198559,NM_022152	chr2,chr2	+,-	C2orf62,TMBIM1	-324,-64572
chr17:45057045-45057908	chr17	+	45057238	45057857	True	NM_203400,NM_054022	chr17,chr17	-,+	RPRML,GOSR2	-624,-56803
chr11:1410915-1411407	chr11	+	1410930	1411108	True	NM_019009,NM_003957	chr11,chr11	-,+	TOLLIP,BRSK2	-80038,20
chr9:123958504-123958708	chr9	+	123958536	123958729	True	NM_001127662,NM_016322	chr9,chr9	+,-	GSN,RAB14	71650,5695
chr6:26058363-26058660	chr6	+	26058363	26058487	True	NM_005319,NM_003531	chr6,chr6	-,+	HIST1H1C,HIST1H3C	-1664,-12782
chr16:12010696-12011241	chr16	+	12010712	12011065	True	NM_001192,NM_002094,NM_001130007,NM_001130006	chr16,chr16,chr16,chr16	+,-,-,-	TNFRSF17,GSPT1,GSPT1,GSPT1	47898,-887,-193,-887
chr11:8009796-8010656	chr11	+	8009821	8010657	True	NM_003754,NM_176821	chr11,chr11	+,-	EIF3F,NLRP10	-1005,-24762
chr12:112728371-112729597	chr12	+	112728683	112729061	True	NM_002834,NM_001109662	chr12,chr12	+,-	PTPN11,C12orf51	127474,90893
chr22:29465587-29466092	chr22	+	29465619	29465863	True	NM_015370,NM_032045,NM_001039570	chr22,chr22,chr22	-,+,+	C22orf31,KREMEN1,KREMEN1	-7712,3202,3202
chr11:3184953-3185702	chr11	+	3184957	3185495	True	NM_001144063,NM_020896,NM_145638,NR_027138	chr11,chr11,chr11,chr11	-,-,-,+	OSBPL5,OSBPL5,OSBPL5,C11orf36	1137,1137,1137,54066
chr16:75241977-75242637	chr16	+	75242169	75242479	True	NM_001025200,NM_001906	chr16,chr16	-,+	CTRB2,CTRB1	-1097,10404
chr2:39440095-39441222	chr2	+	39440193	39441004	True	NR_037875,NM_001009565	chr2,chr2	+,-	LOC728730,CDKL4	223552,15719
chr9:130183991-130184366	chr9	+	130183994	130184276	True	NM_007135,NR_002449	chr9,chr9	+,-	ZNF79,SNORA65	2376,26690
chr10:18238290-18238924	chr10	+	18238430	18238929	True	NM_001145195,NM_014241,NM_152725	chr10,chr10,chr10	+,-,+	SLC39A12,PTPLA,SLC39A12	1838,-579057,1838
chr16:67527941-67528260	chr16	+	67528014	67528199	True	NM_001138,NM_024519	chr16,chr16	-,+	AGRP,FAM65A	-10298,34517
chr17:7241875-7242531	chr17	+	7241890	7242339	True	NM_001005408,NM_032442,NM_014716	chr17,chr17,chr17	-,-,+	NEURL4,NEURL4,ACAP1	-9252,-9252,-2093
chr3:185544235-185544642	chr3	+	185544369	185544643	True	NM_006548,NM_001007225,NR_027317	chr3,chr3,chr3	-,-,+	IGF2BP2,IGF2BP2,C3orf65	-1542,-1542,-113380
chr1:214448833-214449648	chr1	+	214449378	214449536	True	NM_020197,NM_005401	chr1,chr1	+,-	SMYD2,PTPN14	5028,275540
chr18:47907457-47908254	chr18	+	47907485	47907972	True	NM_145060,NM_001039535,NM_014593	chr18,chr18,chr18	+,+,-	SKA1,SKA1,CXXC1	-6144,-6144,-92793
chr2:201633139-201633976	chr2	+	201633143	201633989	True	NM_014670,NR_037886	chr2,chr2	+,-	BZW1,LOC100507140	42657,-33243
chr6:163153516-163154723	chr6	+	163153667	163154609	True	NM_152410,NM_004562,NM_013987,NM_001080379,NM_001080378,NM_013988	chr6,chr6,chr6,chr6,chr6,chr6	+,-,-,+,+,-	PACRG,PARK2,PARK2,PACRG,PACRG,PARK2	-5554,-4833,-4833,-4716,-5554,-4833
chr18:21452160-21452928	chr18	+	21452236	21452853	True	NM_000227,NM_173505,NM_001127718	chr18,chr18,chr18	+,-,+	LAMA3,ANKRD29,LAMA3	130,-209387,130
chr11:60718583-60718817	chr11	+	60718597	60718861	True	NR_027391,NM_006725,NM_016582	chr11,chr11,chr11	-,+,-	SLC15A3,CD6,SLC15A3	446,20253,446
chrX:151995086-151995441	chrX	+	151995086	151995454	True	NM_015922,NM_004344,NM_001129765	chrX,chrX,chrX	+,-,+	NSDHL,CETN2,NSDHL	4056,3897,4056
chr3:33139761-33140552	chr3	+	33139930	33140607	True	NM_001039770,NM_001136238,NM_006371,NM_000404,NM_001079811,NM_001135602	chr3,chr3,chr3,chr3,chr3,chr3	-,-,+,-,-,-	TMPPE,TMPPE,CRTAP,GLB1,GLB1,GLB1	-1637,-1637,14842,-1236,-1616,-1236
chr19:46364718-46365684	chr19	+	46365334	46365679	True	NM_004819,NM_004497	chr19,chr19	-,+	SYMPK,FOXA3	920,1838
chr10:102089880-102090349	chr10	+	102089935	102090340	True	NM_016112,NM_005063	chr10,chr10	-,+	PKD2L1,SCD	-31,16431
chr10:72362616-72362875	chr10	+	72362728	72362838	True	NM_001083116,NM_080722,NM_005041	chr10,chr10,chr10	-,+,-	PRF1,ADAMTS14,PRF1	-197,69720,-197
chr16:30458559-30459229	chr16	+	30458822	30459142	True	NM_001114380,NM_012248	chr16,chr16	+,-	ITGAL,SEPHS2	24840,-1598
chr1:15766862-15767122	chr1	+	15766999	15767071	True	NM_001229,NM_007272	chr1,chr1	-,+	CASP9,CTRC	83919,-2112
chr16:15598575-15600191	chr16	+	15598740	15599908	True	NM_001184998,NM_001142469	chr16,chr16	-,+	KIAA0430,C16orf45	137166,-2668
chr2:208395443-208396933	chr2	+	208395513	208396769	True	NM_004379,NM_134442,NM_145280	chr2,chr2,chr2	+,+,-	CREB1,CREB1,METTL21A	-953,-953,92985
chr1:161006777-161007719	chr1	+	161006911	161007623	True	NM_001113206,NM_001113207,NM_007122,NR_033385,NM_207005,NM_001113205	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,-	TSTD1,TSTD1,USF1,KLHDC9,USF1,TSTD1	1201,1201,8184,60527,8184,1201
chr7:72425786-72426148	chr7	+	72425914	72426190	True	NR_033323,NR_003602	chr7,chr7	-,+	NSUN5P2,LOC541473	-612,14001
chr7:72425786-72426148	chr7	-	75038708	75038984	False	NR_003614,NR_033322	chr7,chr7	-,+	PMS2L2,NSUN5P1	-50493,639
chrX:105432501-105433701	chrX	+	105432577	105433058	True	NM_152423,NM_000354	chrX,chrX	+,-	MUM1L1,SERPINA7	-20337,-149859
chr18:51884372-51884937	chr18	+	51884387	51884929	True	NM_173529,NM_139171	chr18,chr18	+,-	C18orf54,STARD6	241,-3444
chr10:46896520-46896908	chr10	+	46896660	46896745	True	NR_027632,NM_181519	chr10,chr10	+,-	FAM35B,SYT15	895,73907
chr10:46896520-46896908	chr10	+	88910134	88910205	False	NM_019054,NM_005271	chr10,chr10	+,-	FAM35A,GLUD1	-55236,-55358
chr10:46896520-46896908	chr10	+	47378740	47378825	False	NR_024495,NR_027634	chr10,chr10	-,+	LOC642826,FAM35B2	-135246,894
chr10:46896520-46896908	chr10	+	49086410	49086495	False	NM_001137548,NM_002750	chr10,chr10	-,+	FAM25C,MAPK8	121381,523191
chr1:26758031-26758424	chr1	+	26758213	26758463	True	NM_024887,NM_205861,NM_173574	chr1,chr1,chr1	+,+,-	DHDDS,DHDDS,ZNF683	338,338,-58947
chr6:55743838-55745154	chr6	+	55744170	55745144	True	NM_021073,NM_207410	chr6,chr6	-,+	BMP5,GFRAL	-3795,-551961
chr13:113757476-113758039	chr13	+	113757659	113758025	True	NM_001127202,NM_019616,NM_000131	chr13,chr13,chr13	-,+,+	PCID2,F7,F7	105054,2079,2079
chr1:57354878-57356411	chr1	+	57354905	57356426	True	NM_000562,NM_001004303	chr1,chr1	+,-	C8A,C1orf168	-34529,-69536
chr4:81117740-81118265	chr4	+	81117905	81118227	True	NM_001099403,NM_001145794	chr4,chr4	+,-	PRDM8,ANTXR2	429,-123428
chr10:115318888-115319484	chr10	+	115318961	115319524	True	NM_006175,NM_004132,NM_001177660	chr10,chr10,chr10	-,+,+	NRAP,HABP2,HABP2	104332,-6234,-8422
chr9:137805863-137806342	chr9	+	137805874	137806086	True	NM_015837,NM_002003	chr9,chr9	+,-	FCN2,FCN1	-33267,3770
chrX:134975760-134976265	chrX	+	134975764	134976132	True	NM_001017438,NM_018666	chrX,chrX	-,+	CT45A6,SAGE1	-4520,-30
chr11:89894636-89896502	chr11	+	89894694	89896508	True	NM_005467,NM_001144073	chr11,chr11	+,-	NAALAD2,CHORDC1	-26936,60075
chr8:144911974-144912250	chr8	+	144912003	144912297	True	NM_078480,NR_033849,NM_014281,NM_001136033	chr8,chr8,chr8,chr8	-,+,-,-	PUF60,LOC100128338,PUF60,PUF60	-466,-95744,-466,-807
chr10:35932366-35932810	chr10	+	35932493	35932852	True	NM_153368,NM_031866	chr10,chr10	+,-	GJD4,FZD8	-38206,-2131
chr4:39184202-39185162	chr4	+	39184214	39184758	True	NM_025132,NM_024943	chr4,chr4	+,-	WDR19,TMEM156	-241,-150173
chr10:96579674-96580695	chr10	+	96580256	96580553	True	NM_000770,NM_000769	chr10,chr10	-,+	CYP2C8,CYP2C19	248760,-57854
chr1:11106363-11107020	chr1	+	11106416	11106979	True	NM_006610,NM_007375,NM_139208	chr1,chr1,chr1	-,+,-	MASP2,TARDBP,MASP2	367,-33788,367
chr15:78390432-78390757	chr15	+	78390490	78390746	True	NM_001101404,NM_144572	chr15,chr15	+,-	SH2D7,TBC1D2B	-5615,-20496
chr11:43920849-43921864	chr11	+	43920918	43921320	True	NR_026952,NM_021926	chr11,chr11	+,-	LOC729799,ALX4	-2116,410452
chr5:55003793-55005751	chr5	+	55003937	55005506	True	NM_173514,NM_001166533	chr5,chr5	-,+	SLC38A9,DDX4	2714,28338
chr2:37316682-37318187	chr2	+	37316798	37317779	True	NM_174931,NM_019024	chr2,chr2	+,-	CCDC75,HEATR5B	-5255,-5313
chr9:99143048-99144591	chr9	+	99143090	99144296	True	NM_007001,NM_014282	chr9,chr9	-,+	SLC35D2,HABP4	1756,68117
chr3:52185481-52186305	chr3	+	52185656	52185903	True	NM_015426,NM_199166,NM_001161580,NM_001161581	chr3,chr3,chr3,chr3	-,+,-,-	POC1A,ALAS1,POC1A,POC1A	2854,46212,2854,2854
chr3:52571187-52571819	chr3	+	52571190	52571862	True	NM_001124767,NM_001134231,NM_022908	chr3,chr3,chr3	+,-,-	C3orf78,NT5DC2,NT5DC2	-620,-3397,-2097
chr1:26854727-26855193	chr1	+	26854976	26855180	True	NM_002953,NM_173574	chr1,chr1	+,-	RPS6KA1,ZNF683	1068,-155710
chrX:132541854-132542616	chrX	+	132541878	132542410	True	NM_001101357,NM_001448	chrX,chrX	+,-	CCDC160,GPC4	828666,6853
chr1:151585522-151586255	chr1	+	151585644	151586273	True	NM_030918,NM_001172648	chr1,chr1	+,-	SNX27,CELF3	-1034,102569
chr17:26627189-26628758	chr17	+	26627386	26628808	True	NM_014573,NR_028334	chr17,chr17	+,-	TMEM97,FLJ40504	17312,5651
chr19:15194571-15195139	chr19	+	15194832	15195082	True	NM_001004713,NM_006844	chr19,chr19	+,-	OR1I1,ILVBL	2794,41553
chr9:135279690-135280363	chr9	+	135279798	135280264	True	NM_007344,NM_207417	chr9,chr9	-,+	TTF1,C9orf171	2013,5346
chr16:84002852-84003248	chr16	+	84002996	84003062	True	NM_001080442,NM_019065	chr16,chr16	-,+	SLC38A8,NECAB2	72750,-810
chr19:36525552-36526108	chr19	+	36525590	36526060	True	NM_001083961,NM_001199570,NM_015526	chr19,chr19,chr19	+,-,-	WDR62,CLIP3,CLIP3	19722,-2017,-1793
chr10:105877991-105878836	chr10	+	105877996	105878522	True	NM_000494,NM_145247,NM_001002759	chr10,chr10,chr10	-,+,+	COL17A1,MEIR5,MEIR5	-32358,3293,3406
chrX:49021117-49021346	chrX	+	49021162	49021338	True	NM_002668,NM_006150,NM_001099682,NM_001099681,NM_001099680,NM_024859	chrX,chrX,chrX,chrX,chrX,chrX	+,-,+,+,+,+	PLP2,PRICKLE3,MAGIX,MAGIX,MAGIX,MAGIX	6845,21488,-2032,-2032,-943,-2032
chr4:118953596-118954560	chr4	+	118953710	118954306	True	NM_004784,NM_003619	chr4,chr4	+,-	NDST3,PRSS12	1193,319673
chr17:39040068-39040802	chr17	+	39040125	39040812	True	NM_019010,NM_001195386	chr17,chr17	-,+	KRT20,TMEM99	746,-64746
chr11:121162560-121162983	chr11	+	121162647	121162966	True	NR_029671,NM_001024956,NM_006918	chr11,chr11,chr11	-,+,+	MIR125B1,SC5DL,SC5DL	807643,610,421
chr22:50914450-50915381	chr22	+	50914916	50915344	True	NM_024866,NM_017584,NM_002972	chr22,chr22,chr22	+,+,-	ADM2,MIOX,SBF1	4667,9868,-1452
chr12:7169152-7171048	chr12	+	7169199	7170967	True	NM_001734,NM_201442,NM_005768	chr12,chr12,chr12	+,+,-	C1S,C1S,LPCAT3	-1270,-1270,-43357
chr10:22291436-22291868	chr10	+	22291498	22291744	True	NM_012071,NM_022365	chr10,chr10	+,-	COMMD3,DNAJC1	313567,956
chr15:34328102-34329164	chr15	+	34328342	34328934	True	NM_020371,NM_152595	chr15,chr15	-,+	AVEN,PGBD4	2427,65339
chr1:91965820-91966141	chr1	+	91965840	91966158	True	NM_003503,NM_001134419,NM_001017975,NM_001134420	chr1,chr1,chr1,chr1	+,+,-,+	CDC7,CDC7,HFM1,CDC7	245,245,-95414,506
chr11:19371389-19371705	chr11	+	19371444	19371736	True	NM_001111018,NM_024680	chr11,chr11	+,-	NAV2,E2F8	534,-108937
chr3:125534006-125534563	chr3	+	125534228	125534564	True	NR_024250,NR_031687	chr3,chr3	+,-	LOC100125556,MIR548I1	100879,-24833
chr16:89008576-89009500	chr16	+	89008610	89009419	True	NM_175931,NM_016209	chr16,chr16	-,+	CBFA2T3,TRAPPC2L	-1002,-85155
chr13:21277250-21277537	chr13	+	21277353	21277571	True	NM_138284,NM_174928	chr13,chr13	+,-	IL17D,N6AMT2	-28,70536
chr22:37170710-37171913	chr22	+	37170878	37171708	True	NM_001177701,NR_033531,NM_006860,NM_000631,NM_001177702	chr22,chr22,chr22,chr22,chr22	-,-,-,+,-	IFT27,IFT27,IFT27,NCF4,IFT27	514,514,514,85321,-6804
chr1:209980394-209980865	chr1	+	209980456	209980898	True	NM_006147,NM_014388	chr1,chr1	-,+	IRF6,DIEXF	-977,20413
chr7:99725783-99726930	chr7	+	99725811	99726215	True	NM_139315,NM_152755,NM_001190415,NR_033792,NM_203397,NM_005641	chr7,chr7,chr7,chr7,chr7,chr7	-,+,-,-,+,-	TAF6,CNPY4,TAF6,TAF6,MBLAC1,TAF6	-8790,-8597,-8330,-8816,-1542,-8816
chr19:12781422-12781861	chr19	+	12781500	12781562	True	NM_001099737,NM_001173498,NM_032332,NM_000528,NM_016145,NR_029375	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,-,-,+	WDR83,MAN2B1,WDR83,MAN2B1,C19orf56,WDR83	-3933,-3909,-1034,-3909,-1035,-3933
chr2:47915228-47916137	chr2	+	47915516	47916162	True	NM_022055,NM_000179	chr2,chr2	-,+	KCNK12,MSH6	-118046,94058
chr5:68484286-68485017	chr5	+	68484485	68484959	True	NM_176816,NM_022909	chr5,chr5	-,+	CCDC125,CENPH	131501,415
chr3:16218423-16220032	chr3	+	16218432	16219891	True	NM_001047434,NM_054110	chr3,chr3	-,+	DPH3,GALNTL2	86655,-2299
chr3:127872319-127872591	chr3	+	127872365	127872529	True	NM_021937,NM_003707	chr3,chr3	+,-	EEFSEC,RUVBL1	-103,-29694
chr19:54982959-54984215	chr19	+	54982974	54983034	True	NM_198988,NM_052925,NM_145057	chr19,chr19,chr19	-,+,-	LENG9,LENG8,CDC42EP5	-8080,-22960,1438
chr4:85887892-85889225	chr4	+	85888248	85889070	True	NM_014991,NR_015359	chr4,chr4	-,+	WDFY3,NCRNA00247	-704,-328
chr19:49519486-49519819	chr19	+	49519486	49519696	True	NM_000894,NM_000737,NM_033378	chr19,chr19,chr19	-,-,+	LHB,CGB,CGB2	701,7947,15433
chr12:48578722-48579224	chr12	+	48578838	48579189	True	NM_001013635,NM_001004134	chr12,chr12	+,-	C12orf68,OR10AD1	-1528,17936
chr13:100740478-100741011	chr13	+	100740715	100741047	True	NM_001127692,NM_001178004,NM_000282,NM_033132	chr13,chr13,chr13,chr13	+,+,+,-	PCCA,PCCA,PCCA,ZIC5	221,221,221,-116537
chr20:37381754-37382701	chr20	+	37381802	37382712	True	NR_027241,NM_024855	chr20,chr20	-,+	LOC388796,ACTR5	-317784,-4756
chrY:16637373-16637805	chrY	+	16637374	16637846	True	NR_028318,NR_028319,NM_004679,NM_014893	chrY,chrY,chrY,chrY	+,+,-,+	NLGN4Y,NLGN4Y,VCY,NLGN4Y	-2937,-971,-538982,-1799
chr15:60767402-60769118	chr15	+	60767721	60769155	True	NM_012182,NM_001018089,NM_024611	chr15,chr15,chr15	+,-,-	FOXB1,NARG2,NARG2	-471363,2239,2239
chr2:37462956-37463846	chr2	+	37463224	37463561	True	NM_144736,NM_005760,NM_001083946	chr2,chr2,chr2	+,-,+	C2orf56,CEBPZ,C2orf56	-4507,-4484,-4507
chr5:178285604-178286777	chr5	+	178285983	178286748	True	NR_024035,NM_058230	chr5,chr5	-,+	AACSP1,ZNF354B	-82706,205
chr9:46280279-46280645	chr9	+	46280383	46280677	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2649653,406888
chr12:109460462-109461529	chr12	+	109460467	109461076	True	NM_032663,NM_018711	chr12,chr12	+,-	USP30,SVOP	29303,-1622
chr18:28972936-28974256	chr18	+	28973243	28974152	True	NM_177986,NM_024421	chr18,chr18	+,-	DSG4,DSC1	-16564,-230424
chr14:65878822-65879089	chr14	+	65878853	65879125	True	NM_178155,NM_178154,NR_024334,NM_004480,NM_178156	chr14,chr14,chr14,chr14,chr14	+,+,-,+,+	FUT8,FUT8,LOC645431,FUT8,FUT8	-1066,409,260,409,-1066
chr22:41602145-41602657	chr22	+	41602285	41602521	True	NM_138481,NM_031488	chr22,chr22	-,+	CHADL,L3MBTL2	34464,-1025
chr14:105262411-105262815	chr14	+	105262491	105262851	True	NM_005163,NM_001014432,NM_001014431,NM_001137601	chr14,chr14,chr14,chr14	-,-,-,+	AKT1,AKT1,AKT1,ZBTB42	-2553,-411,-411,4081
chr2:189158530-189159044	chr2	+	189158696	189159093	True	NR_030287,NM_052952,NM_016315	chr2,chr2,chr2	+,-,+	MIR561,DIRC1,GULP1	3125,495799,-1365
chr14:100789622-100790855	chr14	+	100789739	100790495	True	NM_001039355,NM_207117	chr14,chr14	-,+	SLC25A29,SLC25A47	-16879,-111
chr11:64950358-64950691	chr11	+	64950379	64950667	True	NM_172230,NM_001198868,NM_001198870,NM_001198869,NM_005186	chr11,chr11,chr11,chr11,chr11	-,+,+,+,+	SYVN1,CAPN1,CAPN1,CAPN1,CAPN1	-48376,-1744,-1126,-1280,-1126
chr2:25141462-25141678	chr2	+	25141475	25141717	True	NR_034113,NM_004036	chr2,chr2	+,-	LOC729723,ADCY3	53263,388
chr1:64239474-64239751	chr1	+	64239524	64239726	True	NM_001083592,NM_014288,NM_005012	chr1,chr1,chr1	+,-,+	ROR1,ITGB3BP,ROR1	-21,-250689,-21
chr15:41125646-41126011	chr15	+	41125807	41125888	True	NM_017726,NM_003710,NM_001130143	chr15,chr15,chr15	-,+,-	PPP1R14D,SPINT1,PPP1R14D	-4900,10357,-4900
chr8:134074081-134074718	chr8	+	134074213	134074625	True	NM_006748,NM_001204869	chr8,chr8	-,+	SLA,WISP1	-1610,128656
chr7:74306345-74306722	chr7	+	74306491	74306685	True	NR_027777,NR_027776,NM_001025202,NR_027775	chr7,chr7,chr7,chr7	+,+,-,+	PMS2P5,PMS2P5,STAG3L2,PMS2P5	208,208,96,208
chr7:74306345-74306722	chr7	+	72476234	72476411	False	NM_001013739,NR_003614	chr7,chr7	-,+	STAG3L3,PMS2L2	167,268
chr7:74306345-74306722	chr7	-	74988483	74988659	False	NR_003614,NM_001002840,NM_018991	chr7,chr7,chr7	-,+,+	PMS2L2,STAG3L1,STAG3L1	-268,-111,-111
chr3:134369646-134370044	chr3	+	134369736	134370042	True	NM_178554,NM_004441	chr3,chr3	-,+	KY,EPHB1	116,144056
chr7:130121724-130122963	chr7	+	130121728	130122975	True	NR_004382,NM_177525,NM_177524,NM_002402	chr7,chr7,chr7,chr7	-,+,+,+	MESTIT1,MEST,MEST,MEST	8089,8197,3070,8962
chr6:29943406-29944429	chr6	+	29943960	29944167	True	NR_001317,NR_028032	chr6,chr6	-,+	HCG4P6,HCG9	-50532,-1119
chr6:29943406-29944429	chr6_mann_hap4	+	1242536	1242746	False	NR_001317,NR_028032	chr6_mann_hap4,chr6_mann_hap4	-,+	HCG4P6,HCG9	-54858,-1114
chr6:29943406-29944429	chr6_dbb_hap3	+	1237447	1237502	False	NR_001317,NR_028032	chr6_dbb_hap3,chr6_dbb_hap3	-,+	HCG4P6,HCG9	-49013,-1272
chr6:29943406-29944429	chr6_ssto_hap7	+	1273279	1273329	False	NR_001317,NR_028032	chr6_ssto_hap7,chr6_ssto_hap7	-,+	HCG4P6,HCG9	-48595,-1114
chr6:29943406-29944429	chr6_qbl_hap6	+	1236907	1236962	False	NR_001317,NR_028032	chr6_qbl_hap6,chr6_qbl_hap6	-,+	HCG4P6,HCG9	-48832,-1274
chr10:111683629-111685357	chr10	+	111683762	111685172	True	NM_020383,NM_019903,NR_030724,NM_001167604	chr10,chr10,chr10,chr10	-,+,-,-	XPNPEP1,ADD3,XPNPEP1,XPNPEP1	-451,80553,-451,-451
chr22:43341665-43342894	chr22	+	43341759	43342831	True	NM_001197,NM_007229	chr22,chr22	+,-	BIK,PACSIN2	163925,266
chr22:30819908-30820160	chr22	+	30819909	30820163	True	NM_001017981,NM_001003704,NM_016498	chr22,chr22,chr22	-,+,+	RNF215,MTFP1,MTFP1	-36607,1447,1447
chr17:8152911-8153307	chr17	+	8152978	8153346	True	NM_025099,NM_012393	chr17,chr17	-,+	CTC1,PFAS	-1565,-444
chr5:150949998-150951046	chr5	+	150950032	150951086	True	NM_001447,NM_078483	chr5,chr5	-,+	FAT2,SLC36A1	-1527,-122922
chr1:204043438-204043679	chr1	+	204043498	204043622	True	NM_005686,NR_027902	chr1,chr1	+,-	SOX13,C1orf157	-1303,-33106
chr9:67681331-67681615	chr9	+	67681398	67681550	True	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	112689,245210
chr9:67681331-67681615	chr9	-	45110686	45110764	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-120501,-1479956
chr9:67681331-67681615	chr9	+	46272555	46272633	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2641825,414932
chr9:67681331-67681615	chr9	-	47167907	47167985	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-3537177,-480392
chr10:82298799-82299604	chr10	+	82298848	82299594	True	NM_207372,NM_138812,NM_001145719	chr10,chr10,chr10	+,-,+	SH2D4B,DYDC1,SH2D4B	-1241,-182348,980
chr19:15218658-15219761	chr19	+	15218905	15219727	True	NM_006844,NM_033025	chr19,chr19	-,+	ILVBL,SYDE1	16900,-742
chr16:81255213-81255516	chr16	+	81255364	81255530	True	NM_017429,NM_052892,NM_001076780	chr16,chr16,chr16	+,-,-	BCMO1,PKD1L2,PKD1L2	16765,-1389,-1389
chr3:126078983-126079665	chr3	+	126079035	126079479	True	NM_182628,NM_014079	chr3,chr3	+,-	CCDC37,KLF15	34302,-2799
chr4:184428411-184430352	chr4	+	184428647	184430388	True	NR_033995,NM_001564	chr4,chr4	-,+	LOC389247,ING2	-2979,-2487
chr9:130689040-130689446	chr9	+	130689143	130689397	True	NM_001135219,NM_175039,NM_001018078,NM_173492,NM_175040	chr9,chr9,chr9,chr9,chr9	-,-,+,-,-	PIP5KL1,ST6GALNAC4,FPGS,PIP5KL1,ST6GALNAC4	3729,-9838,-123686,423,-9838
chr2:238323338-238324601	chr2	+	238323377	238324520	True	NM_001042467,NM_057164,NM_057165,NM_057166,NM_057167,NM_004369	chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-	MLPH,COL6A3,COL6A3,COL6A3,COL6A3,COL6A3	71357,-527,-527,-527,-527,-527
chr2:209026055-209027301	chr2	+	209026282	209027110	True	NM_014617,NM_001178000	chr2,chr2	-,+	CRYGA,PIKFYVE	1252,103880
chr8:144921613-144921823	chr8	+	144921670	144921764	True	NR_033849,NM_178564	chr8,chr8	+,-	LOC100128338,NRBP2	-105411,1432
chr6:97440396-97441759	chr6	+	97440466	97441774	True	NM_014165,NM_052904	chr6,chr6	-,+	NDUFAF4,KLHL32	-94699,-68021
chr22:19838727-19839769	chr22	+	19838999	19839745	True	NM_024627,NM_000754,NM_053004	chr22,chr22,chr22	-,+,-	C22orf29,COMT,GNB1L	2676,89517,2767
chr16:29788461-29789261	chr16	+	29788887	29789119	True	NM_175900,NM_152338	chr16,chr16	-,+	C16orf54,ZG16	-31547,441
chr15:44116641-44116919	chr15	+	44116649	44116943	True	NM_005926,NM_001167941,NM_024908	chr15,chr15,chr15	-,+,+	MFAP1,WDR76,WDR76	58,2168,2168
chr14:72425166-72425581	chr14	+	72425249	72425636	True	NM_004296,NM_012074	chr14,chr14	+,-	RGS6,DPF3	-25515,935230
chr16:56597481-56598020	chr16	+	56597495	56597975	True	NM_031885,NM_032935	chr16,chr16	-,+	BBS2,MT4	-43487,985
chr20:9495950-9496380	chr20	+	9496081	9496287	True	NM_012261,NM_001199897,NM_020341	chr20,chr20,chr20	+,+,-	C20orf103,C20orf103,PAK7	-1136,-1136,323450
chr18:28891673-28893661	chr18	+	28891692	28892861	True	NM_001942,NM_024421	chr18,chr18	+,-	DSG1,DSC1	5190,-148873
chr17:16320046-16320645	chr17	+	16320089	16320545	True	NM_016113,NM_181716	chr17,chr17	+,-	TRPV2,CENPV	-1290,-63277
chr17:46049840-46051415	chr17	+	46049859	46051405	True	NM_024320,NM_176096	chr17,chr17	-,+	PRR15L,CDK5RAP3	-14749,-1481
chr7:29721546-29722474	chr7	+	29721610	29722505	True	NR_036482,NR_024278,NR_036554,NR_027347	chr7,chr7,chr7,chr7	+,-,+,-	DPY19L2P3,LOC646762,DPY19L2P3,LOC100271874	2264,2299,3182,2982
chr7:29721546-29722474	chr7	-	32770918	32770984	False	NR_003502,NR_030320,NR_036680	chr7,chr7,chr7	+,+,-	LOC441208,MIR550A2,DPY19L1P1	-3423,1608,-12138
chr1:227917382-227918003	chr1	+	227917455	227917991	True	NR_024485,NR_024486,NM_053052,NM_001161465,NM_023007	chr1,chr1,chr1,chr1,chr1	+,+,+,-,-	LOC100130093,LOC100130093,SNAP47,JMJD4,JMJD4	-1266,-1266,4705,5171,5171
chr3:47619592-47619808	chr3	+	47619694	47619762	True	NM_006574,NM_015466	chr3,chr3	-,+	CSPG5,PTPN23	647,-197254
chr20:61638563-61638790	chr20	+	61638596	61638810	True	NM_080606,NR_033370	chr20,chr20	-,+	BHLHE23,LOC63930	-209,1924
chr6:168481414-168481999	chr6	+	168481591	168481987	True	NM_030615,NM_001122841,NM_024919	chr6,chr6,chr6	+,-,-	KIF25,FRMD1,FRMD1	-63089,-5059,-1752
chr13:54844848-54846793	chr13	+	54844873	54846692	True	NR_031628,NM_006418	chr13,chr13	-,+	MIR1297,OLFM4	39548,-1242063
chr8:29997897-29998445	chr8	+	29998004	29998335	True	NM_001100916,NM_006571	chr8,chr8	-,+	MBOAT4,DCTN6	3916,15477
chr17:33415195-33415513	chr17	+	33415199	33415437	True	NM_017559,NR_037713	chr17,chr17	+,-	FNDC8,RFFL	33193,961
chr2:208890363-208890643	chr2	+	208890423	208890654	True	NM_001080475,NM_001178000	chr2,chr2	-,+	PLEKHM3,PIKFYVE	-139,240336
chr15:100107313-100109028	chr15	+	100107346	100108980	True	NM_001171894,NM_001130926,NM_001130927,NM_005587,NM_152449	chr15,chr15,chr15,chr15,chr15	+,+,+,+,-	MEF2A,MEF2A,MEF2A,MEF2A,LYSMD4	-1270,-1270,-1270,-1270,164704
chr7:26314104-26314747	chr7	+	26314103	26314648	True	NM_031243,NM_001199835	chr7,chr7	-,+	HNRNPA2B1,SNX10	-73690,16866
chr22:25429704-25430306	chr22	+	25429878	25430006	True	NM_001001663,NM_001145206	chr22,chr22	-,+	TMEM211,KIAA1671	-94564,-6001
chr1:21767259-21767919	chr1	+	21767327	21767751	True	NM_032264,NM_001113348	chr1,chr1	+,-	NBPF3,ECE1	-747,-95293
chr2:10283603-10284086	chr2	+	10283603	10283719	True	NR_036222,NM_182626	chr2,chr2	-,+	MIR4261,C2orf48	49128,-2145
chr17:76975247-76975552	chr17	+	76975325	76975423	True	NM_005567,NM_030968	chr17,chr17	-,+	LGALS3BP,C1QTNF1	688,44827
chr19:40858248-40860139	chr19	+	40858305	40859401	True	NM_012268,NM_001031696,NM_178830	chr19,chr19,chr19	+,+,-	PLD3,PLD3,C19orf47	-4024,-4024,-4012
chr12:41864475-41866070	chr12	+	41864529	41865763	True	NM_001099650,NM_013377	chr12,chr12	-,+	GXYLT1,PDZRN4	672969,-33046
chr5:140228185-140228695	chr5	+	140228240	140228723	True	NM_014005,NM_031860,NM_002109,NM_018911,NM_031859,NM_031856,NM_031857,NM_018901	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,-,+,+,+,+,+	PCDHA9,PCDHA10,HARS,PCDHA8,PCDHA10,PCDHA8,PCDHA9,PCDHA10	-934,6910,-157269,-7384,6910,-7384,-934,6910
chr5:140228185-140228695	chr5	+	140214494	140214611	False	NM_031849,NM_002109,NM_018909,NM_031848,NM_031856,NM_018910,NM_018911,NM_031852	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,-,+,+,+,+,+,+	PCDHA6,HARS,PCDHA6,PCDHA6,PCDHA8,PCDHA7,PCDHA8,PCDHA7	-6895,-143523,-6895,-6895,6295,-576,6295,-576
chr17:33521017-33522034	chr17	+	33521093	33521475	True	NM_173167,NM_152462	chr17,chr17	+,-	UNC45B,AMAC1	-46308,-13
chr2:229347139-229348608	chr2	+	229348114	229348627	True	NM_178821,NM_030623	chr2,chr2	+,-	WDR69,SPHKAP	-611852,-301753
chr16:475088-475520	chr16	+	475236	475390	True	NM_014700,NM_021259	chr16,chr16	+,-	RAB11FIP3,TMEM8A	277,-43286
chr2:191746825-191747651	chr2	+	191746857	191747691	True	NM_014905,NM_007315	chr2,chr2	+,-	GLS,STAT1	-1361,131337
chr15:42842317-42843025	chr15	+	42842626	42842852	True	NM_001130447,NM_153260,NM_018097	chr15,chr15,chr15	+,-,+	HAUS2,LRRC57,HAUS2	-1673,-1624,-1673
chr11:18287207-18287645	chr11	+	18287337	18287659	True	NM_000331,NM_001178006,NM_199161,NM_030754	chr11,chr11,chr11,chr11	+,+,+,-	SAA1,SAA1,SAA1,SAA2	148,148,148,-17116
chr2:88926948-88927158	chr2	+	88927084	88927178	True	NM_144563,NM_004836	chr2,chr2	+,-	RPIA,EIF2AK3	63997,0
chr9:86322952-86323568	chr9	+	86323096	86323592	True	NM_053067,NM_013438,NM_001190727	chr9,chr9,chr9	-,-,+	UBQLN1,UBQLN1,C9orf103	42,42,-85114
chr22:39017061-39018803	chr22	+	39017401	39018579	True	NM_001002880,NM_001013647	chr22,chr22	+,-	CBY1,LOC646851	34078,34105
chr20:60941416-60941618	chr20	+	60941480	60941640	True	NM_001024,NM_005560	chr20,chr20	+,-	RPS21,LAMA5	20480,778
chr1:149772633-149773215	chr1	+	149772654	149773229	True	NM_001161334,NM_000566	chr1,chr1	-,+	HIST2H2BF,FCGR1A	10752,-18455
chr1:149772633-149773215	chr1	+	149388161	149388214	False	NR_027484,NM_001024599	chr1,chr1	+,-	FCGR1C,HIST2H2BF	-18921,11068
chr1:149772633-149773215	chr1	-	120917005	120917576	False	NR_027337,NM_001004340	chr1,chr1	+,-	HIST2H2BA,FCGR1B	-11025,18418
chr2:23679149-23679447	chr2	+	23679297	23679461	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	470523,-71050
chr8:82601199-82601662	chr8	+	82601303	82601705	True	NM_152284,NM_005536,NM_001144879,NM_001144878,NM_001010893	chr8,chr8,chr8,chr8,chr8	+,-,-,-,-	CHMP4C,IMPA1,IMPA1,IMPA1,SLC10A5	42982,-2714,-2714,-2714,5552
chr1:1949419-1950413	chr1	+	1949831	1950145	True	NM_000815,NM_001080484	chr1,chr1	+,-	GABRD,KIAA1751	622,-14555
chr13:78508577-78509205	chr13	+	78508671	78508783	True	NM_001201397,NM_144595	chr13,chr13	-,+	EDNRB,SLAIN1	-14768,-193427
chr1:177940992-177941809	chr1	+	177941053	177941849	True	NM_170692,NM_033127	chr1,chr1	+,-	RASAL2,SEC16B	121014,-2003
chr19:55418209-55419884	chr7	-	94431336	94431394	True	NM_003919,NM_001166160	chr7,chr7	-,+	SGCE,PPP1R9A	-145815,105554
chr14:96857225-96857561	chr14	+	96857376	96857537	True	NM_152327,NM_018036	chr14,chr14	+,-	AK7,ATG2B	910,-27698
chr11:74805234-74806242	chr11	+	74805282	74806256	True	NM_001005285,NM_001145212	chr11,chr11	-,+	OR2AT4,SLCO2B1	-4524,55775
chr13:21524362-21525582	chr13	+	21524778	21525628	True	NM_022459,NM_005870	chr13,chr13	-,+	XPO4,SAP18	-47865,189024
chr12:72055002-72055384	chr12	+	72055145	72055227	True	NM_031435,NM_144982	chr12,chr12	+,-	THAP2,ZFC3H1	2449,2572
chr2:172544116-172544334	chr2	+	172544178	172544266	True	NM_003705,NM_001378	chr2,chr2	-,+	SLC25A12,DYNC1I2	206597,-247
chr7:1016801-1017196	chr7	+	1016813	1017143	True	NM_001031617,NM_017781	chr7,chr7	-,+	COX19,CYP2W1	-1578,5691
chr15:63494399-63494653	chr15	+	63494510	63494692	True	NM_016530,NM_015920	chr15,chr15	+,-	RAB8B,RPS27L	-12839,-44769
chr2:26788730-26788985	chr2	+	26788882	26789028	True	NM_001105519,NM_194248	chr2,chr2	+,-	C2orf70,OTOF	-3452,-7316
chr4:57976871-57978218	chr4	+	57976889	57977840	True	NR_034081,NM_001553	chr4,chr4	+,-	LOC255130,IGFBP7	-1013,-350
chr10:64142459-64143907	chr10	+	64142548	64143643	True	NM_145307,NM_199451,NM_014951,NM_199450	chr10,chr10,chr10,chr10	-,+,+,+	RTKN2,ZNF365,ZNF365,ZNF365	-114082,-8683,-8683,-8683
chr7:44653251-44654417	chr7	+	44654070	44654401	True	NM_182547,NM_001003941,NM_001165036,NM_002541	chr7,chr7,chr7,chr7	-,+,+,+	TMED4,OGDH,OGDH,OGDH	-32243,-8008,-8008,-8008
chr5:132042809-132043695	chr5	+	132042925	132043678	True	NM_007054,NM_172348	chr5,chr5	-,+	KIF3A,IL4	29651,-33610
chr7:128580818-128581176	chr7	+	128580993	128581073	True	NM_199349,NM_001098629,NM_032643,NM_001098627,NM_001098630	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	KCP,IRF5,IRF5,IRF5,IRF5	-30220,-3050,-2773,-272,-3050
chr14:58048560-58049688	chr14	+	58048562	58049694	True	NM_001080455,NM_001011713	chr14,chr14	-,+	SLC35F4,NAA30	13971,-191342
chr1:45477634-45477988	chr1	+	45477661	45478011	True	NM_000374,NM_024602,NR_036510	chr1,chr1,chr1	+,-,+	UROD,HECTD3,UROD	-43,-634,-43
chr1:212872328-212872571	chr1	+	212872352	212872588	True	NM_153606,NM_018664	chr1,chr1	+,-	FAM71A,BATF3	-74614,789
chr16:1020238-1020468	chr16	+	1020267	1020341	True	NR_033646,NM_014587,NM_022773	chr16,chr16,chr16	-,+,-	LMF1,SOX8,LMF1	693,11466,693
chr2:39993175-39994464	chr2	+	39993518	39994420	True	NM_152390,NM_025264	chr2,chr2	+,-	TMEM178,THUMPD2	-100544,12054
chr3:23958915-23959208	chr3	+	23958958	23959018	True	NM_002948,NM_020345	chr3,chr3	+,-	RPL15,NKIRAS1	-370,-421
chr19:59087376-59088040	chr19	+	59087431	59087699	True	NM_003422	chr19	-	MZF1	-2489
chr3:15898882-15900187	chr3	+	15899118	15900221	True	NM_015199,NR_030289	chr3,chr3	-,+	ANKRD28,MIR563	883,15056
chr7:48243432-48243897	chr7	+	48243436	48243678	True	NM_152701,NM_152782	chr7,chr7	+,-	ABCA13,SUN3	-32430,-174720
chr3:189441121-189442279	chr3	+	189441216	189442033	True	NM_018192,NM_001114982	chr3,chr3	-,+	LEPREL1,TP63	396937,65415
chr11:57300048-57300655	chr11	+	57300163	57300467	True	NM_012456,NM_001105565	chr11,chr11	-,+	TIMM10,SMTNL1	-1931,9646
chr3:156876465-156877151	chr3	+	156876586	156877100	True	NR_034008,NM_020307	chr3,chr3	+,-	LOC100498859,CCNL1	-68975,1432
chr17:76209713-76209916	chr17	+	76209748	76209832	True	NM_001168,NR_002219,NM_001012271,NM_001012270	chr17,chr17,chr17,chr17	+,-,+,+	BIRC5,EPR1,BIRC5,BIRC5	444,11001,444,444
chr7:94024289-94024549	chr7	+	94024325	94024569	True	NM_001099400,NM_000089	chr7,chr7	-,+	SGCE,COL1A2	261002,-503
chr1:43617851-43618288	chr1	+	43617871	43618244	True	NM_001101376,NM_006824	chr1,chr1	+,-	FAM183A,EBNA1BP2	-4328,19793
chr1:45965795-45966256	chr1	+	45965835	45966151	True	NM_007170,NR_033297,NR_033296,NR_033298,NM_015506	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	TESK2,CCDC163P,CCDC163P,CCDC163P,MMACHC	-8995,-84,-84,-84,-30
chr6:15079245-15080215	chr6	+	15079364	15080084	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	166442,583255
chr3:44917652-44918794	chr3	+	44917706	44918333	True	NM_003241,NM_001135179	chr3,chr3	+,-	TGM4,ZDHHC3	-1659,99398
chr20:49252319-49252618	chr20	+	49252337	49252547	True	NR_030375,NM_080829	chr20,chr20	+,-	MIR645,FAM65C	-50065,929
chr11:67211306-67211581	chr11	+	67211352	67211431	True	NM_020441,NM_145200,NM_206997,NM_001018070,NM_005608	chr11,chr11,chr11,chr11,chr11	-,+,-,-,-	CORO1B,CABP4,GPR152,CORO1B,PTPRCAP	-369,11386,8828,-89,-6199
chr5:169406101-169406748	chr5	+	169406232	169406772	True	NM_012188,NM_001129891	chr5,chr5	+,-	FOXI1,FAM196B	126144,1022
chr16:23465162-23466991	chr16	+	23465391	23466659	True	NM_019116,NM_153603	chr16,chr16	+,-	UBFD1,COG7	102202,-879
chr20:62794065-62795462	chr20	+	62794162	62795428	True	NM_004535,NM_005286	chr20,chr20	+,-	MYT1,NPBWR2	398,-55978
chrX:9981976-9982372	chrX	+	9982062	9982380	True	NM_015691,NM_000273	chrX,chrX	+,-	WWC3,GPR143	1414,-248057
chr1:207925792-207927384	chr1	+	207925834	207927411	True	NM_153826,NM_172359,NM_172361,NR_029832,NM_002389,NM_172351,NM_172350,NM_172353,NM_172352	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,-,+,+,+,+,+	CD46,CD46,CD46,MIR29C,CD46,CD46,CD46,CD46,CD46	-502,-502,-502,47932,-502,-502,-502,-502,-502
chr16:29301951-29302479	chr16	+	29302009	29302411	True	NR_002939,NM_001031827	chr16,chr16	+,-	RUNDC2C,BOLA2	129,163924
chr16:29301951-29302479	chr16	+	88298588	88298638	False	NM_001127464,NM_001739	chr16,chr16	+,-	ZNF469,CA5A	195240,-328476
chr12:31948162-31948600	chr12	+	31948183	31948301	True	NM_001135863,NM_001013699	chr12,chr12	+,-	METTL20,H3F3C	-135626,-3008
chr19:14550023-14551091	chr19	+	14550193	14550992	True	NM_005804,NM_213560,NM_002741	chr19,chr19,chr19	-,+,+	DDX39A,PKN1,PKN1	-19998,93,-6081
chrX:113291633-113292159	chrX	+	113291769	113292164	True	NM_000868,NM_000640	chrX,chrX	+,-	HTR2C,IL13RA2	526386,960098
chr14:38066980-38067495	chr14	+	38066999	38067541	True	NM_138731,NM_004496	chr14,chr14	+,-	MIPOL1,FOXA1	-399932,-2510
chr16:67429101-67429407	chr16	+	67429137	67429401	True	NM_016140,NM_015964,NM_000196	chr16,chr16,chr16	-,-,+	TPPP3,TPPP3,HSD11B2	-1716,-1716,35634
chr12:125349548-125349809	chr12	+	125349666	125349810	True	NM_005505,NM_080626,NM_001082959	chr12,chr12,chr12	-,+,-	SCARB1,BRI3BP,SCARB1	-1147,128383,-1147
chr10:75016515-75017985	chr10	+	75016736	75017963	True	NM_173348,NM_015190,NM_016065	chr10,chr10,chr10	+,-,-	FAM149B1,DNAJC9,MRPS16	-88918,-9711,-4285
chr1:224614518-224616319	chr1	+	224615070	224616294	True	NM_001115113,NM_014184,NM_025160	chr1,chr1,chr1	-,+,-	WDR26,CNIH4,WDR26	5758,-70526,5758
chr5:74162922-74163951	chr5	+	74162947	74163814	True	NM_015566,NM_014886	chr5,chr5	-,+	FAM169A,NSA2	-332,-99895
chr18:59986949-59988069	chr18	+	59987417	59987674	True	NM_176787,NM_003839	chr18,chr18	-,+	PIGN,TNFRSF11A	-133128,4873
chr12:101680883-101681663	chr12	+	101680883	101681707	True	NM_014503,NM_145913	chr12,chr12	+,-	UTP20,SLC5A8	-7036,-76867
chr8:20055078-20056936	chr8	+	20055808	20056977	True	NM_001693,NM_003053	chr8,chr8	+,-	ATP6V1B2,SLC18A1	-1156,-15091
chr4:1201474-1201689	chr4	+	1201479	1201583	True	NM_001199021,NR_033339,NR_024569	chr4,chr4,chr4	-,+,-	SPON2,C4orf42,LOC100130872	1217,41644,1217
chr19:7894748-7895131	chr19	+	7894847	7894977	True	NM_145245,NM_001190467	chr19,chr19	+,-	EVI5L,FLJ22184	183,44399
chr1:39546021-39546638	chr1	+	39546071	39546525	True	NM_017821,NM_012090	chr1,chr1	-,+	RHBDL2,MACF1	-138615,563
chr17:41854462-41855227	chr17	+	41854687	41855177	True	NM_004090,NM_001136483	chr17,chr17	-,+	DUSP3,C17orf105	1249,2625
chr17:59534580-59534787	chr17	+	59534611	59534788	True	NM_199290,NM_018488	chr17,chr17	-,+	NACA2,TBX4	133826,-855
chr4:57845590-57845969	chr4	+	57845627	57845815	True	NM_032313,NM_000938	chr4,chr4	-,+	C4orf14,POLR2B	-1801,-574
chr19:17357768-17358492	chr19	+	17357771	17358421	True	NM_005234,NM_014173	chr19,chr19	-,+	NR2F6,BABAM1	-1620,19810
chr2:105952925-105953536	chr2	+	105953246	105953464	True	NM_001142621,NM_024093,NM_004257	chr2,chr2,chr2	-,+,-	TGFBRAP1,C2orf49,TGFBRAP1	-7098,548,-7098
chr1:8939698-8940458	chr1	+	8939710	8940485	True	NM_001215,NM_001201483,NM_001428	chr1,chr1,chr1	+,-,-	CA6,ENO1,ENO1	65436,-8075,-559
chr7:5014702-5015362	chr7	+	5014970	5015238	True	NM_198403,NR_023384,NR_023385,NR_015449	chr7,chr7,chr7,chr7	-,+,+,+	MMD2,RNF216L,RNF216L,RNF216L	-16126,-1416,-1416,-1416
chr1:893788-894255	chr1	+	894011	894193	True	NM_015658,NM_198317,NM_001160184,NM_032129	chr1,chr1,chr1,chr1	-,+,+,+	NOC2L,KLHL17,PLEKHN1,PLEKHN1	536,1773,7683,7683
chr19:19843777-19844055	chr19	+	19843776	19843984	True	NM_033204,NM_021030	chr19,chr19	+,-	ZNF101,ZNF14	-64164,-13
chr19:47852354-47852581	chr19	+	47852358	47852618	True	NM_001009813,NM_014681	chr19,chr19	-,+	MEIS3,DHX34	70217,-45
chr7:56231312-56231796	chr7	+	56231418	56231766	True	NM_015411,NM_001145712	chr7,chr7	+,-	SUMF2,LOC389493	-99566,-47328
chr1:119559295-119561273	chr1	+	119559315	119561253	True	NM_001005783,NM_152380	chr1,chr1	+,-	HAO2,TBX15	350148,-27136
chr4:39090927-39092699	chr4	+	39090926	39091997	True	NM_199039,NM_024943	chr4,chr4	+,-	KLHL5,TMEM156	-27127,-56885
chrX:44336536-44337863	chrX	+	44336687	44337818	True	NM_022076,NM_173794	chrX,chrX	+,-	DUSP21,FUNDC1	365430,64460
chr7:1785453-1785664	chr7	+	1785480	1785660	True	NM_001134340,NM_001128636	chr7,chr7	-,+	PSMG3,ELFN1	-175812,-36733
chr6:41885060-41885961	chr6	+	41885356	41885891	True	NM_004275,NM_004053	chr6,chr6	-,+	MED20,BYSL	3036,3073
chr9:101018097-101018374	chr9	+	101018209	101018291	True	NM_018946,NM_018421	chr9,chr9	+,-	NANS,TBC1D2	-199301,-206
chr7:35840728-35840929	chr7	+	35840727	35840975	True	NM_022373,NM_001788,NM_001011553	chr7,chr7,chr7	-,+,+	HERPUD2,SEPT7,SEPT7	-105955,-151,-151
chr3:169490330-169490531	chr3	+	169490393	169490567	True	NM_001185119,NM_001185118,NM_032487,NM_018657,NR_033702,NR_001566,NR_033703	chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,-,+,+,-,+	MYNN,MYNN,ARPM1,MYNN,MYNN,TERC,MYNN	1485,285,-2710,285,285,-7545,285
chr4:76421817-76423168	chr4	+	76421849	76422780	True	NM_001008925,NM_144721	chr4,chr4	-,+	RCHY1,THAP6	16915,16873
chr19:20748034-20748261	chr19	+	20748039	20748309	True	NM_001159293,NR_034060	chr19,chr19	-,+	ZNF737,ZNF85	367,357749
chr3:128779971-128780349	chr3	+	128780097	128780378	True	NM_001204886,NM_000174	chr3,chr3	-,+	RAB43,GP9	60319,-503
chr1:207141404-207142501	chr1	+	207141860	207142469	True	NM_001122979,NM_006850,NM_032029,NM_001170631	chr1,chr1,chr1,chr1	-,+,-,-	FCAMR,IL24,FCAMR,FCAMR	1558,-71123,1558,1558
chr12:110906067-110906538	chr12	+	110906073	110906387	True	NM_013300,NM_001164372,NM_016301,NM_001164373	chr12,chr12,chr12,chr12	+,-,-,-	C12orf24,GPN3,GPN3,GPN3	-44,189,16,16
chr15:85523183-85523586	chr15	+	85523222	85523580	True	NM_173454,NM_014300,NM_002605	chr15,chr15,chr15	+,-,+	PDE8A,SEC11A,PDE8A	1624,-263548,1624
chr22:18596082-18597061	chr22	+	18596123	18597095	True	NM_001136004,NM_001193414,NM_018943	chr22,chr22,chr22	-,+,+	MICAL3,TUBA8,TUBA8	-88798,-2721,-2721
chr2:132384982-132386060	chr2	+	132385663	132385750	True	NR_033885,NM_001085365	chr2,chr2	+,-	POTEKP,MZT2A	-36456,-135599
chr11:65668419-65670327	chr11	+	65668698	65670099	True	NM_005438,NM_006848	chr11,chr11	-,+	FOSL1,CCDC85B	-701,-10874
chr8:101572215-101572560	chr8	+	101572215	101572396	True	NM_198401,NM_003114	chr8,chr8	-,+	ANKRD46,SPAG1	-203,-401703
chr10:38298373-38299214	chr10	+	38298650	38299228	True	NM_006974,NM_145011,NM_006954	chr10,chr10,chr10	+,-,+	ZNF33A,ZNF25,ZNF33A	349,-33197,349
chr19:48950931-48952396	chr19	+	48951104	48952338	True	NM_013348,NM_006801,NM_031485	chr19,chr19,chr19	+,-,+	KCNJ14,KDELR1,GRWD1	6427,-56294,-2138
chr7:35297554-35297972	chr7	+	35297599	35297791	True	NM_001166220,NM_001077653,NM_001011553	chr7,chr7,chr7	-,-,+	TBX20,TBX20,SEPT7	-3888,-3888,542835
chr19:4793319-4793585	chr19	+	4793318	4793458	True	NM_182919,NM_018708	chr19,chr19	-,+	TICAM1,FEM1A	38329,-1641
chr7:77166474-77166685	chr7	+	77166605	77166703	True	NM_001131008,NM_002835,NM_017439,NM_001131009	chr7,chr7,chr7,chr7	+,+,-,+	PTPN12,PTPN12,PION,PTPN12	648,69,-120888,648
chr16:46654689-46655032	chr16	+	46654695	46654897	True	NM_014321,NM_024745	chr16,chr16	+,-	ORC6,SHCBP1	68660,464
chr17:41924788-41925464	chr17	+	41924799	41925133	True	NR_003562,NM_001168324,NM_001168323,NM_001168322,NM_145273	chr17,chr17,chr17,chr17,chr17	-,+,+,+,+	MPP3,CD300LG,CD300LG,CD300LG,CD300LG	-14252,-334,-334,-334,-334
chr4:122724228-122724834	chr4	+	122724249	122724638	True	NM_005033,NM_001237,NM_001034194	chr4,chr4,chr4	+,-,+	EXOSC9,CCNA2,EXOSC9	-1839,20500,-1839
chr10:89417734-89419088	chr10	+	89417930	89419089	True	NM_001015880,NM_004670,NM_032810	chr10,chr10,chr10	+,+,-	PAPSS2,PAPSS2,ATAD1	386,386,158879
chr9:135993400-135994522	chr9	+	135993672	135994504	True	NR_001275,NM_006266	chr9,chr9	+,-	CELP,RALGDS	-35798,2107
chrX:152760691-152761036	chrX	+	152760747	152760987	True	NM_001711,NM_017518	chrX,chrX	+,-	BGN,HAUS7	-451,-24144
chr19:50083983-50084613	chr19	+	50084066	50084551	True	NM_000951,NM_015953	chr19,chr19	+,-	PRRG2,NOSIP	35,-263
chr4:122291413-122291687	chr4	+	122291524	122291726	True	NM_198179,NR_024365	chr4,chr4	-,+	QRFPR,LOC100192379	10505,394013
chr12:113908380-113908902	chr12	+	113908542	113908945	True	NM_022363,NM_138432	chr12,chr12	-,+	LHX5,SDSL	982,-48377
chr5:69322430-69323104	chr5	+	69322729	69322905	True	NM_001178087,NM_022968,NR_024054,NM_021967,NM_022978	chr5,chr5,chr5,chr5,chr5	+,+,-,+,+	SERF1B,SERF1A,LOC100170939,SERF1A,SERF1B	-1702,-1708,198767,-1708,-1702
chr5:69322430-69323104	chr5	+	70198147	70198323	False	NM_001178087,NM_022968,NM_004536,NM_021967,NM_022978	chr5,chr5,chr5,chr5,chr5	+,+,-,+,+	SERF1B,SERF1A,NAIP,SERF1A,SERF1B	-1702,-1708,122668,-1708,-1702
chr3:149469929-149470253	chr3	+	149469988	149470252	True	NM_007282,NM_016094	chr3,chr3	+,-	RNF13,COMMD2	60222,84
chr8:42065966-42066709	chr8	+	42065965	42066660	True	NM_006803,NM_033011,NM_000930	chr8,chr8,chr8	+,-,-	AP3M2,PLAT,PLAT	-55553,-771,-771
chr20:49410778-49411013	chr20	+	49410796	49411036	True	NM_198799,NM_015339,NM_017843,NM_001010974	chr20,chr20,chr20,chr20	+,-,+,+	BCAS4,ADNP,BCAS4,BCAS4	430,136541,430,430
chr4:79856168-79857250	chr4	+	79856195	79857165	True	NM_198892,NM_001040202	chr4,chr4	+,-	BMP2K,PAQR3	-158714,3467
chr7:150038632-150038833	chr7	+	150038691	150038757	True	NM_138434,NM_002889	chr7,chr7	+,-	C7orf29,RARRES2	-11804,56
chr5:177661391-177661688	chr5	+	177661414	177661736	True	NM_153373,NM_031266	chr5,chr5	-,+	AGXT2L2,HNRNPAB	-1611,-29957
chr7:72741037-72741909	chr7	+	72741076	72741760	True	NM_001135211,NM_003602,NM_178125	chr7,chr7,chr7	+,+,-	FKBP6,FKBP6,TRIM50	394,539,375
chr7:72741037-72741909	chr7	+	72439537	72439673	False	NR_033323,NR_003602	chr7,chr7	-,+	NSUN5P2,LOC541473	-14235,518
chr7:72741037-72741909	chr7	-	75025226	75025362	False	NM_198853,NM_198924,NR_003614	chr7,chr7,chr7	+,+,-	TRIM74,TRIM73,PMS2L2	-374,-374,-37011
chr10:94620-94880	chr10	+	94742	94882	True	NM_001164154,NM_177987,NM_006624	chr10,chr10,chr10	-,-,+	TUBB8,TUBB8,ZMYND11	672,346,85522
chr2:208488997-208489495	chr2	+	208489027	208489427	True	NM_145280,NM_001127395,NM_001142300	chr2,chr2,chr2	-,-,+	METTL21A,METTL21A,CCNYL1	319,596,86836
chr6:13803415-13804477	chr6	+	13803580	13804290	True	NM_001165034,NM_001031713	chr6,chr6	+,-	RNF182,CCDC90A	120386,10554
chr2:99953260-99953660	chr2	+	99953309	99953709	True	NM_015904,NM_005783	chr2,chr2	+,-	EIF5B,TXNDC9	124,-449
chr1:28200757-28201886	chr1	+	28201412	28201898	True	NM_001039477,NM_004848,NM_002946,NM_001105556	chr1,chr1,chr1,chr1	+,+,-,+	C1orf38,C1orf38,RPA2,C1orf38	-2408,-2408,39388,-2408
chr20:47895196-47895575	chr20	+	47895200	47895616	True	NR_003605,NR_003604,NR_002433,NR_003606,NR_003695,NR_036658,NR_036659,NM_021035,NR_003030	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,+,+,+,+,+,+,-,+	NCRNA00275,NCRNA00275,SNORD12C,NCRNA00275,SNORD12B,NCRNA00275,NCRNA00275,ZNFX1,SNORD12	-536,-536,-91,-536,1233,-536,-72,-444,1603
chr21:46877197-46877552	chr21	+	46877239	46877349	True	NM_130444,NR_027498,NM_030582	chr21,chr21,chr21	+,-,+	COL18A1,NCRNA00175,COL18A1	-1866,-32254,-1866
chr5:149829391-149829693	chr5	+	149829410	149829706	True	NM_001025071,NM_001025070,NM_005617,NM_001543	chr5,chr5,chr5,chr5	-,-,-,+	RPS14,RPS14,RPS14,NDST1	-91,-91,-91,57967
chr22:17075715-17076776	chr7	-	152139368	152139459	False	NR_002935,NM_170606	chr7,chr7	+,-	FABP5P3,MLL3	-5452,-6278
chr22:17075715-17076776	chr22	+	17075952	17076637	True	NM_014406,NR_001591	chr22,chr22	-,+	CCT8L2,psiTPTE22	-2252,6163
chr2:135016995-135017733	chr2	+	135016997	135017781	True	NM_002410,NM_030923	chr2,chr2	+,-	MGAT5,TMEM163	-5219,458840
chr4:7437302-7439076	chr4	+	7437328	7439016	True	NR_036238,NM_001085382	chr4,chr4	+,-	MIR4274,PSAPL1	22738,-628
chr12:118497917-118498304	chr12	+	118498049	118498345	True	NM_018639,NM_181578	chr12,chr12	-,+	WSB2,RFC5	656,-43593
chr6:50014948-50015751	chr6	+	50014957	50015445	True	NM_001145652,NM_001037498	chr6,chr6	+,-	C6orf141,DEFB112	-496895,973
chr18:77629147-77629405	chr18	+	77629152	77629432	True	NM_012283,NM_001146343	chr18,chr18	+,-	KCNG2,PQLC1	-5535,82271
chr19:55874698-55875255	chr19	+	55874908	55875282	True	NM_000641,NM_144613,NM_001145402,NM_139172	chr19,chr19,chr19,chr19	-,-,-,+	IL11,COX6B2,FAM71E2,TMEM190	6582,-8726,-288,12921
chr4:187466466-187467172	chr4	+	187466488	187467174	True	NM_000128,NM_005958	chr4,chr4	+,-	F11,MTNR1A	-279421,9413
chr1:167205631-167206670	chr1	+	167205890	167206545	True	NR_037163,NM_005814	chr1,chr1	+,-	POU2F1,GPA33	-15820,-146022
chr16:3013312-3013650	chr16	+	3013368	3013693	True	NM_172229,NM_152341,NM_004203,NM_024507	chr16,chr16,chr16,chr16	+,+,-,+	KREMEN2,PAQR4,PKMYT1,KREMEN2	523,5648,16897,523
chr6:4137306-4138637	chr6	+	4137495	4138655	True	NM_006117,NR_028588,NM_001085401,NM_206836,NM_001166010	chr6,chr6,chr6,chr6,chr6	-,-,+,-,-	ECI2,ECI2,C6orf201,ECI2,ECI2	-1664,-1664,-58106,-1664,-1793
chr11:69196699-69197282	chr11	+	69196841	69197229	True	NM_153451,NM_138768	chr11,chr11	-,+	ORAOV1,MYEOV	292986,-135270
chr6:111926744-111927009	chr6	+	111926757	111927003	True	NM_001164281,NR_028338,NM_147686,NR_034109	chr6,chr6,chr6,chr6	-,-,-,+	TRAF3IP2,TRAF3IP2,TRAF3IP2,LOC643749	521,521,521,-122134
chr8:134103768-134104669	chr8	+	134104048	134104674	True	NM_001045556,NM_001204869	chr8,chr8	-,+	SLA,WISP1	10686,98607
chr10:104537562-104538975	chr10	+	104537668	104538862	True	NM_000102,NM_017787	chr10,chr10	-,+	CYP17A1,C10orf26	58478,-1832
chr1:14677976-14679877	chr1	+	14678083	14679615	True	NM_015209,NR_027136	chr1,chr1	+,-	KAZN,C1orf126	245597,799395
chr1:156863067-156863354	chr1	+	156863076	156863370	True	NM_014215,NM_001080471	chr1,chr1	-,+	INSRR,PEAR1	-34364,152
chr21:30396962-30397219	chr21	+	30396986	30397256	True	NM_016940,NM_001001992,NM_001032410,NM_006447	chr21,chr21,chr21,chr21	-,+,+,+	RWDD2B,USP16,USP16,USP16	-5301,-99,-99,-99
chr17:80232689-80233498	chr17	+	80232708	80233478	True	NM_001893,NM_001042423,NM_139062	chr17,chr17,chr17	-,+,-	CSNK1D,SLC16A3,CSNK1D	-1114,-42615,-1114
chr9:72658396-72658888	chr9	+	72658416	72658750	True	NM_153267,NM_001099666	chr9,chr9	+,-	MAMDC2,PTAR1	-1,-283540
chr17:70116916-70117229	chr17	+	70117087	70117229	True	NM_000346,NR_036488	chr17,chr17	+,-	SOX9,LOC100499467	17,471764
chr10:72141458-72141733	chr10	+	72141552	72141670	True	NM_018239,NM_207119,NM_018205,NM_004096	chr10,chr10,chr10,chr10	-,-,-,+	LRRC20,LRRC20,LRRC20,EIF4EBP2	762,-138,762,22190
chr4:3550945-3551325	chr4	+	3551064	3551374	True	NM_002337,NM_173660	chr4,chr4	-,+	LRPAP1,DOK7	-16840,-86082
chr4:3550945-3551325	chr9	+	47170545	47170595	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-3539815,-483030
chr6:41190598-41191269	chr6	+	41190697	41191233	True	NM_198153,NR_027256	chr6,chr6	+,-	TREML4,TREML3	4828,-5012
chr1:213124686-213124888	chr1	+	213124689	213124919	True	NM_001136474,NM_001136475,NM_144567,NM_024749	chr1,chr1,chr1,chr1	+,+,-,+	VASH2,VASH2,ANGEL2,VASH2	-853,-853,64299,-853
chr11:62380399-62380672	chr11	+	62380604	62380700	True	NM_153265,NM_012200,NM_000327	chr11,chr11,chr11	-,-,+	EML3,B3GAT3,ROM1	-367,8798,-442
chr1:89989945-89990421	chr1	+	89990110	89990448	True	NR_033981,NM_001134476	chr1,chr1	-,+	FLJ27354,LRRC8B	108055,6
chr16:85648291-85648503	chr16	+	85648294	85648535	True	NM_001134473,NM_014615,NM_016095	chr16,chr16,chr16	+,+,-	KIAA0182,KIAA0182,GINS2	-3320,-1425,74103
chr1:233753541-233754552	chr1	+	233753800	233754355	True	NM_002245,NM_014801	chr1,chr1	+,-	KCNK1,PCNXL2	-4102,-322341
chr13:27846147-27846411	chr13	+	27846150	27846268	True	NM_182488,NM_206827	chr13,chr13	-,+	USP12,RASL11A	-100117,-1737
chr19:56442929-56443957	chr19	+	56443106	56443860	True	NM_176810,NM_176811	chr19,chr19	-,+	NLRP13,NLRP8	8,15337
chr11:6052852-6054746	chr11	+	6052916	6054788	True	NM_001001917,NM_001005181	chr11,chr11	-,+	OR56A1,OR56B4	-3945,74220
chr19:53142829-53144292	chr19	+	53143360	53144217	True	NM_001105551,NM_001105550,NM_001105553,NM_001105552,NM_001105554,NM_018300,NR_023311,NM_001105549	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,+,-	ZNF83,ZNF83,ZNF83,ZNF83,ZNF83,ZNF83,ZNF137P,ZNF83	-1716,-1716,-1716,-1716,-1716,-1716,-43474,-1716
chr16:27416647-27416962	chr16	+	27416719	27416883	True	NM_181078,NM_181079,NR_037158	chr16,chr16,chr16	+,+,-	IL21R,IL21R,LOC283888	-3303,-3303,47881
chr19:1093884-1094140	chr19	+	1094002	1094164	True	NM_001039847,NM_002695,NM_002085	chr19,chr19,chr19	+,-,+	GPX4,POLR2E,GPX4	9771,1277,9771
chr19:18794428-18794670	chr19	+	18794504	18794574	True	NM_004750,NM_001098482,NM_015321	chr19,chr19,chr19	-,+,+	CRLF1,CRTC1,CRTC1	-76844,-130,-130
chr19:51889565-51890509	chr19	+	51890061	51890459	True	NM_001161748,NM_001193623,NR_033235,NM_030657	chr19,chr19,chr19,chr19	-,-,+,-	LIM2,LOC147646,LOC100129083,LIM2	801,3419,28700,801
chr19:5718870-5719433	chr19	+	5718877	5719425	True	NM_152784,NM_004793	chr19,chr19	+,-	TMEM146,LONP1	1262,801
chr2:9694114-9695606	chr2	+	9694414	9695296	True	NM_001039613,NM_003183	chr2,chr2	+,-	IAH1,ADAM17	-79795,671
chr13:111359848-111361383	chr13	+	111360163	111360740	True	NM_198218,NM_198219,NM_005537,NM_024537,NM_198217	chr13,chr13,chr13,chr13,chr13	+,+,+,-,+	ING1,ING1,ING1,CARS2,ING1	4869,4884,6618,-1683,4342
chr17:43649752-43650024	chr17_ctg5_hap1	+	262907	263018	False	NM_001006607,NM_016632	chr17_ctg5_hap1,chr17_ctg5_hap1	-,+	LRRC37A2,ARL17A	-22238,-26829
chr17:43649752-43650024	chr17_ctg5_hap1	+	480851	480962	False	NM_001193465,NM_014834	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	KIAA1267,LRRC37A	82535,-22247
chr17:43649752-43650024	chr17	+	43649897	43650066	True	NR_026901,NR_037772	chr17,chr17	-,+	LOC644172,CRHR1	29735,47643
chr17:43649752-43650024	chr17	-	44567692	44567803	False	NM_001006607,NM_016632	chr17,chr17	+,-	LRRC37A2,ARL17A	22272,89338
chr10:49205815-49206075	chr10	+	49205923	49206097	True	NM_001137549,NM_001137548,NM_002750,NM_001137556	chr10,chr10,chr10,chr10	-,-,+,-	FAM25G,FAM25C,MAPK8,FAM25B	1778,1778,403589,1778
chr10:49205815-49206075	chr10	+	47179786	47179840	False	NM_001137549,NM_001137548,NM_001098845,NM_001137556,NM_001040084,NM_005972	chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,-,+	FAM25G,FAM25C,ANXA8L1,FAM25B,ANXA8,PPYR1	1898,1898,-5746,1898,-5664,-96303
chr10:49205815-49206075	chr10	-	48249509	48249563	False	NM_001137549,NM_001137548,NM_001098845,NM_001137556,NM_001040084,NM_002900	chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,-	FAM25G,FAM25C,ANXA8L1,FAM25B,ANXA8,RBP3	-1898,-1898,5743,-1898,5661,141478
chr3:18465942-18466341	chr3	+	18465957	18466233	True	NM_002971,NM_144633,NM_001195470	chr3,chr3,chr3	-,+,-	SATB1,KCNH8,SATB1	646,723783,646
chr1:236028599-236029437	chr1	+	236028628	236029393	True	NM_000081,NM_003272	chr1,chr1	-,+	LYST,GPR137B	880,276438
chr14:103591747-103592179	chr14	+	103591757	103591903	True	NR_033938,NM_006291	chr14,chr14	-,+	LOC100131366,TNFAIP2	63512,760
chr4:17942804-17944738	chr4	+	17943168	17944562	True	NM_153686,NM_022346	chr4,chr4	-,+	LCORL,NCAPG	78973,-130707
chr19:34400863-34401923	chr19	+	34401141	34401967	True	NM_001166057,NM_024076	chr19,chr19	-,+	PEPD,KCTD15	-388342,-113444
chr19:57187031-57187398	chr19	+	57187088	57187256	True	NM_001193628,NM_001005850	chr19,chr19	+,-	LOC147670,ZNF835	-32617,-2842
chr9:21965988-21967295	chr9	+	21966109	21967327	True	NM_058197,NM_001195132,NM_000077,NR_024274	chr9,chr9,chr9,chr9	-,-,-,+	CDKN2A,CDKN2A,CDKN2A,C9orf53	7549,7855,7855,49
chr5:141488832-141489231	chr5	+	141488877	141489287	True	NM_005471,NM_030571	chr5,chr5	-,+	GNPDA1,NDFIP1	-96257,-604
chr12:53646210-53646474	chr12	+	53646237	53646379	True	NM_001170790,NM_032889,NM_000966	chr12,chr12,chr12	+,+,-	MFSD5,MFSD5,RARG	-918,-412,-20201
chr18:32643364-32644243	chr18	+	32643387	32644282	True	NM_001112734,NR_026570	chr18,chr18	-,+	ZSCAN30,MAPRE2	225964,-22121
chr12:7130053-7130574	chr12	+	7130370	7130616	True	NM_001734,NM_005768	chr12,chr12	+,-	C1S,LPCAT3	37363,-4528
chr5:54471845-54472234	chr5	+	54471857	54472245	True	NR_031572,NR_030387,NR_029960,NM_001145734,NM_152623,NM_001170402,NM_001008397	chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,-,-,+	MIR449C,MIR449B,MIR449A,CDC20B,CDC20B,CDC20B,GPX8	-3676,-5287,-5407,-2852,-2852,-2852,-15924
chr1:110655717-110655918	chr1	+	110655721	110655897	True	NM_006492,NM_203412	chr1,chr1	-,+	ALX3,UBL4B	-42399,-710
chr21:44527945-44528153	chr21	+	44528113	44528195	True	NM_006758,NM_001025203,NM_001025204,NM_000394	chr21,chr21,chr21,chr21	-,-,-,+	U2AF1,U2AF1,U2AF1,CRYAA	-425,-425,-425,60945
chr6:15965249-15965575	chr6	+	15965290	15965608	True	NM_013262,NR_036448	chr6,chr6	+,-	MYLIP,DTNBP1	163708,-302001
chr17:19280945-19281209	chr17	+	19280964	19281230	True	NM_001198695,NM_002749,NM_002404,NM_139033,NM_139032,NM_139034	chr17,chr17,chr17,chr17,chr17,chr17	-,+,-,+,+,+	MFAP4,MAPK7,MFAP4,MAPK7,MAPK7,MAPK7	9352,543,9352,12,12,543
chr1:8002798-8004327	chr1	+	8003002	8004334	True	NM_001561,NM_001123377	chr1,chr1	-,+	TNFRSF9,PARK7	-15,17379
chr13:23759864-23760899	chr13	+	23759938	23760776	True	NM_000231,NM_014363	chr13,chr13	+,-	SGCG,SACS	-4929,247115
chr3:167453516-167453718	chr3	+	167453642	167453752	True	NM_007217,NM_145859,NM_145860,NM_001122752,NM_005025	chr3,chr3,chr3,chr3,chr3	-,-,-,+,+	PDCD10,PDCD10,PDCD10,SERPINI1,SERPINI1	-1048,-991,-1012,-265,-186
chr19:893251-893688	chr19	+	893260	893498	True	NM_005481,NM_032551	chr19,chr19	-,+	MED16,KISS1R	-42,23843
chr11:84633708-84634101	chr11	+	84633708	84634125	True	NM_001364,NM_001193537	chr11,chr11	-,+	DLG2,TMEM126B	390,705496
chr15:84117065-84118655	chr15	+	84117086	84118683	True	NM_003027,NM_001717,NR_026799	chr15,chr15,chr15	+,-,+	SH3GL3,BNC1,SH3GL3	-1053,-163618,-1053
chr17:36995761-36996436	chr17	+	36996073	36996435	True	NM_006148,NM_001080465	chr17,chr17	+,-	LASP1,C17orf98	29676,1257
chr2:64232886-64234046	chr2	+	64232959	64233573	True	NM_006759,NM_001005739	chr2,chr2	+,-	UGP2,VPS54	-163996,12701
chr2:181845938-181846158	chr2	+	181846040	181846198	True	NM_001030311,NM_006357,NM_182678	chr2,chr2,chr2	-,+,+	CERKL,UBE2E3,UBE2E3	675686,-750,-980
chr19:49590298-49591240	chr19	+	49590495	49591108	True	NM_031886,NM_003089	chr19,chr19	-,+	KCNA7,SNRNP70	-14297,-2082
chr6:79944160-79944388	chr6	+	79944179	79944409	True	NM_001201363,NM_001201362,NM_001010844,NM_004242,NM_138730	chr6,chr6,chr6,chr6,chr6	-,-,+,-,-	HMGN3,HMGN3,IRAK1BP1,HMGN3,HMGN3	96,96,-367041,96,96
chr18:55102199-55102506	chr18	+	55102286	55102420	True	NM_000140,NM_004852	chr18,chr18	-,+	FECH,ONECUT2	151599,496
chr1:12957371-12958401	chr1	+	12957388	12958403	True	NM_001012276,NM_001039361	chr1,chr1	+,-	PRAMEF8,PRAMEF10	18046,14
chr1:12957371-12958401	chr1	-	13408825	13409290	False	NM_001012276,NM_001098376	chr1,chr1	-,+	PRAMEF8,PRAMEF15	-18060,11885
chr1:12957371-12958401	chr1	-	13629622	13630087	False	NM_001012276,NM_001098376	chr1,chr1	-,+	PRAMEF8,PRAMEF15	-18072,11885
chr22:28201000-28202377	chr22	+	28201210	28202209	True	NM_002430,NR_026962	chr22,chr22	-,+	MN1,TTC28-AS1	-3724,113154
chr6:167527648-167528227	chr6	+	167527672	167528242	True	NM_005299,NM_031409,NM_004367	chr6,chr6,chr6	-,+,+	GPR31,CCR6,CCR6	43127,7998,-2428
chr12:120972535-120972747	chr12	+	120972643	120972795	True	NM_014868,NM_032314	chr12,chr12	+,-	RNF10,COQ5	-562,-5679
chr12:58139381-58139723	chr12	+	58139471	58139711	True	NM_005981,NM_001122772,NM_014770,NM_138396,NM_000075	chr12,chr12,chr12,chr12,chr12	+,-,-,+,-	TSPAN31,AGAP2,AGAP2,MARCH9,CDK4	-738,-7442,-3531,9188,6503
chr8:56803904-56805651	chr8	+	56804291	56805665	True	NM_002350,NM_152417	chr8,chr8	+,-	LYN,TMEM68	-11968,-118406
chr1:16092168-16092368	chr1	+	16092194	16092378	True	NM_001024215,NM_001024216,NM_001089591,NM_017556	chr1,chr1,chr1,chr1	+,+,-,+	FBLIM1,FBLIM1,UQCRHL,FBLIM1	-1251,-786,41866,-6990
chr8:6856513-6856780	chr8	+	6856565	6856741	True	NM_001042500,NM_004084,NM_001164452,NR_036687,NR_036686	chr8,chr8,chr8,chr8,chr8	-,-,+,-,-	DEFA1B,DEFA1,FAM90A14,DEFT1P2,DEFT1P	33,33,257684,-9322,-9322
chr8:6856513-6856780	chr8	+	6837455	6837631	False	NM_001042500,NM_018361,NM_004084,NR_036687,NR_036686	chr8,chr8,chr8,chr8,chr8	-,+,-,-,-	DEFA1B,AGPAT5,DEFA1,DEFT1P2,DEFT1P	33,-271628,33,9662,9662
chr8:6856513-6856780	chr8	+	6875708	6875840	False	NM_005217,NR_036686,NR_036687,NM_001164452,NM_001042500,NM_004084	chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,+,-,-	DEFA3,DEFT1P,DEFT1P2,FAM90A14,DEFA1B,DEFA1	26,-9362,-9362,238585,33,33
chr16:11678580-11678783	chr16	+	11678633	11678805	True	NM_003498,NM_001136473,NR_024320,NM_001136472,NM_004862	chr16,chr16,chr16,chr16,chr16	+,-,-,-,-	SNN,LITAF,LITAF,LITAF,LITAF	83483,2052,2568,2052,1475
chr12:10084740-10086060	chr12	+	10084850	10085833	True	NM_138337,NM_001130711	chr12,chr12	+,-	CLEC12A,CLEC2A	38174,-4
chr5:124222546-124224040	chr5	+	124222994	124223982	True	NM_004384,NM_020747	chr5,chr5	+,-	CSNK1G3,ZNF608	-1375252,-142189
chr8:145558856-145559384	chr8	+	145558858	145559428	True	NM_024531,NM_012079,NM_031309	chr8,chr8,chr8	+,-,-	GPR172A,DGAT1,SCRT1	22796,-8291,565
chr3:127842904-127843611	chr3	+	127842915	127843571	True	NM_021937,NM_003707	chr3,chr3	+,-	EEFSEC,RUVBL1	28741,-244
chr5:52081728-52083618	chr5	+	52082339	52083616	True	NM_004531,NM_015946,NM_181501	chr5,chr5,chr5	-,+,+	MOCS2,PELO,ITGA1	321759,157,519
chr5:122971115-122971766	chr5	+	122971399	122971795	True	NM_004384,NM_153223	chr5,chr5	+,-	CSNK1G3,CEP120	-123665,-212113
chr5:173043783-173044088	chr5	+	173043822	173044129	True	NR_027109,NM_001159651,NM_138369	chr5,chr5,chr5	+,-,-	LOC285593,BOD1,BOD1	-37216,-156,-156
chrX:151288876-151289419	chrX	+	151289059	151289415	True	NM_001011550,NM_021049	chrX,chrX	+,-	MAGEA4,MAGEA5	-202350,-2615
chr2:179664250-179665287	chr2	+	179664407	179665318	True	NM_133432,NM_133437,NM_003319,NM_019091,NM_133378,NM_133379	chr2,chr2,chr2,chr2,chr2,chr2	-,-,-,+,-,-	TTN,TTN,TTN,PLEKHA3,TTN,TTN	6882,6882,6882,-319260,6882,6882
chr4:1007373-1007805	chr4	+	1007424	1007852	True	NM_001004358,NM_001004356,NM_021923,NM_213613	chr4,chr4,chr4,chr4	+,+,+,-	FGFRL1,FGFRL1,FGFRL1,SLC26A1	-1715,-1865,-1223,-20200
chr5:134911894-134913234	chr5	+	134912016	134912928	True	NM_004887,NM_145282	chr5,chr5	-,+	CXCL14,SLC25A48	2097,257436
chr15:83775163-83775374	chr15	+	83775328	83775406	True	NM_001144903,NM_023003,NM_025238	chr15,chr15,chr15	+,+,-	TM6SF1,TM6SF1,BTBD1	917,917,-39222
chr1:43298196-43299645	chr1	+	43298357	43299568	True	NM_018538,NM_199342	chr1,chr1	+,-	ERMAP,CCDC23	-7159,-15298
chr7:48073542-48074166	chr7	+	48073669	48074189	True	NM_001030019,NM_001100159,NM_152782	chr7,chr7,chr7	-,+,-	SUN3,C7orf57,SUN3	-4953,927,-4953
chr19:44100591-44100873	chr19	+	44100595	44100911	True	NM_001007561,NM_001145347,NM_024327	chr19,chr19,chr19	-,+,+	IRGQ,ZNF576,ZNF576	-308,-74,-102
chr2:170684778-170686227	chr2	+	170684877	170685696	True	NM_172070,NM_014168	chr2,chr2	+,-	UBR3,METTL5	-910,-3524
chr11:123912093-123913398	chr11	+	123912101	123913296	True	NM_001004464,NM_001004463	chr11,chr11	+,-	OR10G8,OR10G7	-11822,-2393
chrX:20283516-20283746	chrX	+	20283607	20283793	True	NM_001173456,NM_004586	chrX,chrX	+,-	PDHA1,RPS6KA3	-921647,1007
chr3:108213970-108215862	chr3	+	108214022	108215281	True	NM_014648,NM_014981	chr3,chr3	+,-	DZIP3,MYH15	93055,32945
chr3:125635438-125635698	chr3	+	125635458	125635552	True	NM_001015050,NR_024251,NR_024250	chr3,chr3,chr3	-,+,+	ALG1L,LOC100125556,LOC100125556	20385,-65,-65
chr19:51390100-51390359	chr19	+	51390342	51390417	True	NR_002948,NM_005551	chr19,chr19	-,+	KLKP1,KLK2	9296,-13707
chr2:54311587-54311904	chr2	+	54311762	54311856	True	NM_014614,NM_138448	chr2,chr2	-,+	PSME4,ACYP2	-113785,30553
chr15:86340076-86341346	chr15	+	86340260	86341188	True	NM_022480,NM_144767	chr15,chr15	-,+	KLHL25,AKAP13	-2071,-120049
chr1:22351258-22351498	chr1	+	22351398	22351484	True	NR_023919,NR_023918,NM_005529	chr1,chr1,chr1	+,+,-	HSPC157,HSPC157,HSPG2	557,222,-87648
chr14:100257972-100259190	chr14	+	100258328	100259050	True	NM_004434,NM_001008707,NM_001144995	chr14,chr14,chr14	+,+,-	EML1,EML1,CCDC85C	694,694,-187601
chr9:34048342-34048638	chr9	+	34048384	34048684	True	NM_018449,NR_003690	chr9,chr9	-,+	UBAP2,SNORD121B	313,-114149
chr2:44404212-44404850	chr2	+	44404305	44404905	True	NM_001033557,NM_001033556,NM_177969,NM_177968,NM_002706,NM_133259	chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,+,-	PPM1B,PPM1B,PPM1B,PPM1B,PPM1B,LRPPRC	-8365,-8365,-8365,-8365,-8365,-181161
chr5:34682119-34683923	chr5	+	34682692	34683694	True	NM_001145521,NM_001145523,NM_001145525,NR_026591	chr5,chr5,chr5,chr5	+,+,+,-	RAI14,RAI14,RAI14,RAD1	917,3969,917,232087
chr2:142888353-142888977	chr2	+	142888383	142888987	True	NM_018557,NM_001032998	chr2,chr2	-,+	LRP1B,KYNU	333,746207
chr22:35515187-35516227	chr22	+	35515244	35516033	True	NM_001008494,NM_005368	chr22,chr22	+,-	ISX,MB	-53165,497402
chr1:114480280-114480769	chr1	+	114480292	114480588	True	NM_152696,NM_198268,NM_006594	chr1,chr1,chr1	+,+,-	HIPK1,HIPK1,AP4B1	-8355,-8355,-32551
chr22:30753799-30754038	chr22	+	30753932	30754066	True	NM_001005409,NM_005877,NM_001017437	chr22,chr22,chr22	-,-,+	SF3A1,SF3A1,CCDC157	-1019,-1019,-1356
chr20:1245505-1246742	chr20	+	1245505	1246759	True	NM_014723,NM_015685	chr20,chr20	+,-	SNPH,SDCBP2	200,47608
chr3:105086737-105087771	chr3	+	105086966	105087808	True	NM_170662,NM_001627	chr3,chr3	-,+	CBLB,ALCAM	500129,-1304
chr12:75687870-75688235	chr12	+	75688178	75688264	True	NM_032606,NM_152779	chr12,chr12	-,+	CAPS2,GLIPR1L1	35622,40198
chr22:22652896-22653422	chr22	+	22652960	22653402	True	NM_080764,NR_027293	chr22,chr22	-,+	ZNF280B,LOC96610	210153,-548
chr22:22652896-22653422	chr15	+	20354101	20354189	False	NR_036432,NR_027411	chr15,chr15	-,+	HERC2P3,GOLGA8C	357332,413484
chr22:22652896-22653422	chr15	+	21360698	21360786	False	NR_027411,NR_028506	chr15,chr15	+,-	GOLGA8C,NF1P1	-593113,-226073
chr17:77811681-77812264	chr17	+	77811777	77812289	True	NM_005189,NM_003655	chr17,chr17	+,-	CBX2,CBX4	-59851,974
chr13:111214895-111215390	chr13	+	111214986	111215304	True	NM_017817,NM_018210	chr13,chr13	-,+	RAB20,CARKD	-915,52703
chr12:53692842-53693483	chr12	+	53692934	53693278	True	NM_021640,NM_002624,NM_001173466,NM_145897	chr12,chr12,chr12,chr12	+,+,-,+	C12orf10,PFDN5,AAAS,PFDN5	191,-3752,22184,-3752
chr11:18652410-18653413	chr11	+	18652740	18653422	True	NM_153347,NM_194285	chr11,chr11	+,-	TMEM86A,SPTY2D1	66928,2656
chr11:14613807-14614224	chr11	+	14613806	14614272	True	NM_148976,NM_000922	chr11,chr11	-,+	PSMA1,PDE3B	50958,50996
chr3:154103581-154105556	chr3	+	154104109	154105349	True	NM_001038705,NM_015595	chr3,chr3	-,+	GPR149,ARHGEF26	42205,-265018
chr4:25255524-25256194	chr4	+	25255715	25255928	True	NM_018323,NM_016955	chr4,chr4	+,-	PI4K2B,SEPSECS	-20127,-93511
chr7:44084884-44086089	chr7	+	44084946	44085901	True	NR_024116,NM_001014436,NM_001122956,NR_015401,NM_014063,NR_024416	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,+,+,+	RASA4P,DBNL,DBNL,FLJ35390,DBNL,FLJ35390	-4724,-758,-758,-6299,-758,-5930
chr6:42886215-42886618	chr6	+	42886338	42886518	True	NM_138296,NM_001008739	chr6,chr6	+,-	PTCRA,C6orf226	-2663,-27784
chr14:64971436-64971661	chr14	+	64971440	64971678	True	NM_006977,NM_001123329,NM_014950	chr14,chr14,chr14	-,+,+	ZBTB25,ZBTB1,ZBTB1	-886,-199,-199
chr5:150603634-150603870	chr5	+	150603635	150603869	True	NM_000405,NM_015621	chr5,chr5	+,-	GM2A,CCDC69	28743,19
chr11:65235471-65235790	chr11	+	65235571	65235767	True	NR_030343,NM_182556	chr11,chr11	+,-	MIR612,SLC25A45	-23704,-85429
chr16:28414655-28414883	chr16	+	28414661	28414881	True	NM_003752,NM_018690,NM_001099661,NM_001037808	chr16,chr16,chr16,chr16	-,+,-,-	EIF3C,APOBR,EIF3CL,EIF3C	334,91111,331,334
chr16:28414655-28414883	chr16	-	28723065	28723285	False	NM_003752,NM_001099661,NM_001037808,NM_177536	chr16,chr16,chr16,chr16	+,+,+,-	EIF3C,EIF3CL,EIF3C,SULT1A1	-334,-331,-334,-88199
chr19:57673553-57674481	chr19	+	57673715	57674475	True	NM_001012729,NM_003417	chr19,chr19	-,+	DUXA,ZNF264	4438,28392
chr10:81894110-81894866	chr10	+	81894350	81894766	True	NM_001012973,NR_027432	chr10,chr10	+,-	PLAC9,LOC219347	-2157,-55401
chr20:43107156-43107520	chr20	+	43107155	43107381	True	NM_198941,NM_024331,NM_001039199	chr20,chr20,chr20	-,+,+	SERINC3,TTPAL,TTPAL	43407,-2659,-2659
chr1:29563375-29563629	chr1	+	29563381	29563612	True	NM_016011,NM_133177,NM_133178,NM_001195001,NM_001024732,NM_005704	chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,+,-,+	MECR,PTPRU,PTPRU,PTPRU,MECR,PTPRU	-5927,-404,-404,-404,-5927,-404
chr12:54403261-54404331	chr12	+	54403281	54403779	True	NM_006897,NM_022658,NR_003084,NM_014620,NR_003716,NM_153693	chr12,chr12,chr12,chr12,chr12,chr12	+,+,+,+,-,+	HOXC9,HOXC8,HOXC5,HOXC4,HOTAIR,HOXC6	-9455,-442,6862,6862,-40766,6862
chr19:44890837-44892160	chr19	+	44891332	44892108	True	NM_181756,NM_152354	chr19,chr19	+,-	ZNF233,ZNF285	-127308,13719
chr1:234508365-234509097	chr1	+	234508365	234509128	True	NM_001012985,NM_005646	chr1,chr1	+,-	C1orf31,TARBP1	300,105771
chr2:201936738-201937646	chr2	+	201936784	201937445	True	NM_002491,NM_173822	chr2,chr2	+,-	NDUFB3,FAM126B	-373,-392
chr9:124922215-124923033	chr9	+	124922227	124922762	True	NM_198469,NM_014222	chr9,chr9	+,-	MORN5,NDUFA8	-88,-129
chr17:45290541-45292347	chr17	+	45290542	45292372	True	NM_002476,NM_001002841,NM_001256	chr17,chr17,chr17	+,+,-	MYL4,MYL4,CDC27	-3879,-4165,-23877
chr4:151504464-151504694	chr4	+	151504513	151504705	True	NM_006439,NM_001199282	chr4,chr4	+,-	MAB21L2,LRBA	-1487,431781
chr12:124155030-124155352	chr12	+	124155243	124155392	True	NM_001414,NM_024809,NM_001143850	chr12,chr12,chr12	-,+,+	EIF2B1,TCTN2,TCTN2	-36920,267,267
chr12:132565831-132566250	chr12	+	132565990	132566292	True	NM_175066,NR_003290	chr12,chr12	-,+	DDX51,EP400NL	62638,2535
chr17:66256493-66256927	chr17	+	66256492	66256975	True	NM_014960,NM_001174166	chr17,chr17	+,-	ARSG,SLC16A6	-1221,30480
chr4:152328812-152329315	chr4	+	152328881	152329227	True	NM_001128923,NM_001109977	chr4,chr4	-,+	SH3D19,FAM160A1	-181221,1170
chr17:38441933-38442538	chr17	+	38442144	38442349	True	NM_001254,NM_152219	chr17,chr17	+,-	CDC6,GJD3	1796,78653
chr7:22862275-22862570	chr7	+	22862274	22862608	True	NR_003075,NM_019059	chr7,chr7	+,-	SNORD93,TOMM7	33623,-69
chr9:71652348-71654091	chr9	+	71652437	71653891	True	NM_001161706,NM_000144,NM_181425,NM_002732	chr9,chr9,chr9,chr9	+,+,+,-	FXN,FXN,FXN,PRKACG	-2009,-2009,-2009,-23398
chr6:27807182-27807457	chr6	+	27807279	27807506	True	NM_003510,NM_003520,NM_003541	chr6,chr6,chr6	-,+,-	HIST1H2AK,HIST1H2BN,HIST1H4K	-1162,-904,-7974
chr6:42980231-42981116	chr6	+	42980316	42981116	True	NM_014623,NM_033112,NM_057161	chr6,chr6,chr6	-,+,+	MEA1,RRP36,KLHDC3	552,8268,860
chr3:14169162-14170928	chr3	+	14169236	14170958	True	NM_144636,NM_001098502,NM_024334	chr3,chr3,chr3	-,-,+	CHCHD4,CHCHD4,TMEM43	-2865,-2865,-2847
chr18:3879661-3880074	chr18	+	3879667	3880103	True	NR_024101,NM_004746	chr18,chr18	+,-	FLJ35776,DLGAP1	-285606,82
chr1:230883298-230883544	chr1	+	230883327	230883593	True	NM_016452,NM_000029,NM_006615	chr1,chr1,chr1	+,-,+	CAPN9,AGT,CAPN9	-217,-32991,-248
chr4:100452961-100453744	chr4	+	100453147	100453787	True	NM_152292,NM_032149	chr4,chr4	-,+	RG9MTD2,C4orf17	31088,-21041
chr12:52886924-52887261	chr12	+	52887127	52887306	True	NM_002284,NM_005554	chr12,chr12	+,-	KRT86,KRT6A	-191536,-46
chr15:44954770-44955311	chr15	+	44954874	44955278	True	NM_004048,NM_001160227,NM_025137	chr15,chr15,chr15	+,-,-	B2M,SPG11,SPG11	48406,648,648
chr5:75698207-75698437	chr5	+	75698245	75698466	True	NM_006633,NM_004101	chr5,chr5	+,-	IQGAP2,F2RL2	682,220825
chr1:48285348-48286260	chr1	+	48285414	48286206	True	NM_001194986,NM_004474	chr1,chr1	-,+	LOC388630,FOXD2	176406,-383776
chr19:55327944-55328447	chr19	+	55250123	55328484	True	NM_013289,NM_001127255	chr19,chr19	+,-	KIR3DL1,NLRP7	-184,130445
chr1:101491737-101492022	chr1	+	101491783	101492023	True	NM_001077395,NM_001077394,NM_133496,NM_015958	chr1,chr1,chr1,chr1	-,-,+,-	DPH5,DPH5,SLC30A7,DPH5	-421,-421,-130200,-421
chr10:12110492-12110810	chr10	+	12110533	12110693	True	NM_018706,NM_080599	chr10,chr10	+,-	DHTKD1,UPF2	240,-25510
chr6:52858996-52859598	chr6	+	52859002	52859577	True	NM_001512,NM_033481	chr6,chr6	-,+	GSTA4,FBXO9	651,70218
chr1:48241238-48241771	chr1	+	48241279	48241793	True	NM_001194986,NM_004474	chr1,chr1	-,+	LOC388630,FOXD2	220819,-339643
chr2:220462603-220462899	chr2	+	220462636	220462876	True	NM_001173408,NM_052902	chr2,chr2	-,+	OBSL1,STK11IP	-26368,-91
chr2:27310353-27311585	chr2	+	27310400	27311199	True	NM_007046,NM_006488,NM_000221,NM_001134693	chr2,chr2,chr2,chr2	+,+,+,-	EMILIN1,KHK,KHK,OST4	-9023,-847,-847,-15833
chr1:169076309-169076983	chr1	+	169076379	169076876	True	NM_001677,NM_013330	chr1,chr1	+,-	ATP1B1,NME7	-483,260361
chr19:16770422-16770733	chr19	+	16770439	16770601	True	NM_024104,NM_024074	chr19,chr19	-,+	C19orf42,TMEM38A	417,1336
chr2:113830082-113831201	chr2	+	113830132	113831164	True	NM_032556,NM_173161,NM_173178	chr2,chr2,chr2	+,+,-	IL1F10,IL1F10,IL1F8	-288,-4636,-19692
chr9:135459336-135460160	chr9	+	135459342	135460032	True	NM_022779,NM_020064	chr9,chr9	-,+	DDX31,BARHL1	85806,-1400
chr17:72198309-72198912	chr17	+	72198350	72198860	True	NM_000999,NR_026914,NM_001035258	chr17,chr17,chr17	+,-,+	RPL38,MGC16275,RPL38	934,10651,934
chr19:51455964-51456306	chr19	+	51456013	51456121	True	NM_001077492,NM_012427,NM_005551,NM_001077491	chr19,chr19,chr19,chr19	-,-,+,-	KLK5,KLK5,KLK2,KLK5	273,273,-79375,273
chr1:3569220-3569450	chr1	+	3569252	3569476	True	NM_001204188,NM_001204184,NM_005427,NM_001204186,NM_001204187,NM_001204185,NM_017818	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,+,-	TP73,TP73,TP73,TP73,TP73,TP73,WDR8	-174,-174,-174,-174,-174,-174,-2581
chr8:132053386-132053612	chr8	+	132053422	132053630	True	NM_015137,NM_001115	chr8,chr8	+,-	EFR3A,ADCY8	862725,-587
chr13:36675638-36675839	chr13	+	36675642	36675872	True	NM_001111046,NM_004734	chr13,chr13	+,-	CCNA1,DCLK1	330094,29692
chr19:7851351-7852212	chr19	+	7851426	7852132	True	NR_026692,NR_002931	chr19,chr19	-,+	CD209,CLEC4GP1	-38962,237
chr1:224517612-224517876	chr1	+	224517751	224517841	True	NM_002533,NM_206840,NM_014184	chr1,chr1,chr1	-,-,+	NVL,NVL,CNIH4	81,81,26753
chr3:121266805-121267612	chr3	+	121266871	121267243	True	NM_199420,NM_001012659	chr3,chr3	-,+	POLQ,ARGFX	-2018,19534
chrX:30599912-30601542	chrX	+	30600238	30601480	True	NM_000167,NM_025159	chrX,chrX	+,-	GK,CXorf21	69995,-4205
chr5:125968399-125969344	chr5	+	125968734	125969046	True	NM_001202404,NM_207408	chr5,chr5	-,+	ALDH7A1,C5orf48	-37652,-1382
chr6:41099975-41100766	chr6	+	41100086	41100800	True	NR_026938,NM_178174	chr6,chr6	+,-	LOC221442,TREML1	-31365,21320
chr17:7196444-7196816	chr17	+	7196560	7196834	True	NM_001042,NM_015982	chr17,chr17	+,-	SLC2A4,YBX2	-11557,1092
chr16:3141364-3141915	chr16	+	3141565	3141931	True	NM_001042428,NM_032805	chr16,chr16	+,-	ZNF205,ZSCAN10	20631,980
chrX:55186591-55187390	chrX	+	55186679	55187345	True	NM_001166703,NM_001166702,NR_030722,NM_001166700,NM_001166699,NM_130467,NM_001166704,NM_001166701,NM_138362	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,+,-,-,-	FAM104B,FAM104B,FAM104B,FAM104B,FAM104B,PAGE5,FAM104B,FAM104B,FAM104B	240,272,333,333,333,59445,333,333,333
chr19:9201403-9201911	chr19	+	9201407	9201915	True	NM_001005193,NM_001004456	chr19,chr19	-,+	OR7G2,OR1M1	12117,2005
chr10:38691768-38691991	chr10	+	38691767	38691879	True	NR_027269,NR_024497	chr10,chr10	-,+	SEPT7L,LOC399744	7,25194
chr13:51386483-51388383	chr13	+	51386608	51388399	True	NM_198989,NM_024570	chr13,chr13	-,+	DLEU7,RNASEH2B	29536,95414
chr15:102251657-102252397	chr15	+	102251879	102252385	True	NM_152334,NM_001005326	chr15,chr15	-,+	TARSL2,OR4F6	12310,93537
chr16:47007492-47007911	chr16	+	47007607	47007909	True	NM_005880,NM_001142466	chr16,chr16	-,+	DNAJA2,GPT2	18,-88556
chr3:44663978-44664448	chr3	+	44663986	44664449	True	NM_001024855,NM_020696,NM_006991	chr3,chr3,chr3	+,-,+	ZNF197,KIAA1143,ZNF197	2061,138781,2061
chr14:67707185-67707453	chr14	+	67707196	67707498	True	NM_022474,NM_015994	chr14,chr14	+,-	MPP5,ATP6V1D	522,119272
chr8:21819385-21820926	chr8	+	21819564	21820886	True	NM_003974,NM_015024	chr8,chr8	-,+	DOK2,XPO7	-48359,-42443
chr6:28411058-28411269	chr6	+	28411146	28411306	True	NM_001509,NM_001012455	chr6,chr6	+,-	GPX5,ZSCAN23	82482,23
chr22:36012186-36013762	chr22	+	36012201	36013449	True	NM_005368,NM_030641,NM_203378,NM_203377	chr22,chr22,chr22,chr22	-,+,-,-	MB,APOL6,MB,MB	-15,30974,156,6002
chr8:27937617-27939164	chr8	+	27937748	27939121	True	NM_018091,NM_001010906	chr8,chr8	+,-	ELP3,C8orf80	11462,2317
chr9:41431940-41433347	chr9	+	41431952	41432742	True	NM_015667	chr9	+	FAM75A7	67936
chr9:41431940-41433347	chr9	-	65577618	65578408	False	NR_024496,NM_015667	chr9,chr9	+,-	LOC442421,FAM75A7	915860,-68008
chr9:41431940-41433347	chr9	+	40632663	40632713	False	NM_001083124,NM_033160	chr9,chr9	+,-	FAM75A3,ZNF658	67577,159449
chr9:41431940-41433347	chr9	+	39286696	39286804	False	NM_033655,NM_001085452	chr9,chr9	-,+	CNTNAP3,FAM75A1	1546,68894
chr9:41431940-41433347	chr9	+	39815946	39816368	False	NR_003528,NM_001085452	chr9,chr9	-,+	LOC653501,FAM75A1	-351420,68606
chr9:34401679-34402782	chr9	+	34401785	34402747	True	NM_012144,NM_032596	chr9,chr9	+,-	DNAI1,C9orf24	56063,-3936
chr2:113342497-113343586	chr2	+	113342515	113343539	True	NM_032309,NR_033871	chr2,chr2	+,-	CHCHD5,FLJ42351	-530,58268
chr1:235186646-235188304	chr1	+	235186816	235188324	True	NM_001037277,NR_002956	chr1,chr1	+,-	GGPS1,SNORA14B	303428,102978
chr12:11178615-11179055	chr12	+	11178942	11179102	True	NM_176888,NM_001110213,NM_176885	chr12,chr12,chr12	-,+,-	TAS2R19,PRH2,TAS2R31	-3772,-97158,4954
chr18:47720689-47720918	chr18	+	47720885	47720967	True	NM_001039535,NM_001080467	chr18,chr18	+,-	SKA1,MYO5B	180424,534
chr9:3528816-3530227	chr9	+	3528858	3530206	True	NM_134428,NM_002919,NR_026663	chr9,chr9,chr9	-,-,+	RFX3,RFX3,C9orf70	-2875,-2875,368439
chr2:20788664-20789829	chr2	+	20788887	20789790	True	NM_022460,NM_182828	chr2,chr2	-,+	HS1BP3,GDF7	61125,76633
chr3:123810474-123811755	chr3	+	123810573	123811773	True	NR_028136,NM_003947,NM_001024660,NM_017578	chr3,chr3,chr3,chr3	+,+,+,-	KALRN,KALRN,KALRN,ROPN1	1784,1784,1784,-100374
chr22:41956531-41957624	chr22	+	41956704	41957540	True	NM_001018052,NM_014460	chr22,chr22	-,+	POLR3H,CSDC2	-16225,43
chr9:138800268-138800611	chr9	+	138800355	138800649	True	NM_015447,NM_020822	chr9,chr9	-,+	CAMSAP1,KCNT1	-1350,-206375
chr3:44903909-44905389	chr3	+	44904037	44905340	True	NR_030290,NM_020696,NM_144638	chr3,chr3,chr3	+,-,+	MIR564,KIAA1143,TMEM42	-708,-100864,-680
chr17:25400102-25401250	chr17	+	25400133	25401183	True	NM_015626,NM_000625	chr17,chr17	+,-	WSB1,NOS2	219922,726422
chr1:24066308-24066684	chr1	+	24066325	24066687	True	NM_003198,NM_001127621	chr1,chr1	+,-	TCEB3,GALE	3168,59423
chr19:1512174-1512534	chr19	+	1512234	1512388	True	NR_026557,NM_213604	chr19,chr19	+,-	PLK5P,ADAMTSL5	11689,850
chr2:26093114-26094551	chr2	+	26093689	26094435	True	NM_018263,NM_016131	chr2,chr2	-,+	ASXL2,RAB10	6932,162293
chr5:24609886-24611393	chr5	+	24609946	24611123	True	NM_020227,NM_006727	chr5,chr5	+,-	PRDM9,CDH10	-1102273,34019
chr22:31477709-31478400	chr22	+	31477761	31478427	True	NM_134269,NM_006932,NM_134270,NM_080430	chr22,chr22,chr22,chr22	+,+,+,-	SMTN,SMTN,SMTN,SELM	-507,-507,-507,25174
chr3:195449517-195449743	chr3	+	195449591	195449747	True	NM_001098516,NM_004532,NM_152673	chr3,chr3,chr3	+,-,+	MUC20,MUC4,MUC20	1350,89451,-1889
chr1:150459395-150459723	chr1	+	150459436	150459753	True	NM_025150,NM_001197320	chr1,chr1	+,-	TARS2,MCL1	166,92511
chr1:13392152-13393416	chr1	+	13392266	13393464	True	NM_001012276,NM_001098376	chr1,chr1	-,+	PRAMEF8,PRAMEF15	-1501,27711
chr1:13392152-13393416	chr1	-	12973739	12974937	False	NM_001012277,NM_001012276,NM_001039361	chr1,chr1,chr1	+,+,-	PRAMEF7,PRAMEF8,PRAMEF10	2575,1512,-15645
chr1:13392152-13393416	chr1	+	13613063	13614261	False	NM_001012277,NM_001012276,NM_001098376	chr1,chr1,chr1	-,-,+	PRAMEF7,PRAMEF8,PRAMEF15	-2576,-1513,27711
chr8:80523383-80524232	chr8	+	80523390	80524009	True	NM_001040708,NM_007029,NM_001199214	chr8,chr8,chr8	-,+,+	HEY1,STMN2,STMN2	156139,-392,-392
chr1:226251366-226252086	chr1	+	226251458	226252062	True	NM_152608,NM_002107,NR_002315	chr1,chr1,chr1	-,+,+	C1orf55,H3F3A,LOC440926	-64392,-1101,-1081
chr19:41037340-41037692	chr19	+	41037549	41037735	True	NM_025213,NM_000713	chr19,chr19	+,-	SPTBN4,BLVRB	-1205,-65824
chr1:103572101-103572376	chr1	+	103572249	103572425	True	NM_080629,NM_001854,NM_080630,NM_017619,NM_001190709	chr1,chr1,chr1,chr1,chr1	-,-,-,+,-	COL11A1,COL11A1,COL11A1,RNPC3,COL11A1	1677,1677,1677,496152,1677
chr11:118186205-118187359	chr11	+	118186221	118187373	True	NM_000733,NM_000732	chr11,chr11	+,-	CD3E,CD3D	-10977,26136
chr12:121160922-121161783	chr12	+	121161089	121161626	True	NM_000017,NM_198202	chr12,chr12	+,-	ACADS,POP5	1944,-141888
chr4:111560327-111560756	chr4	+	111560331	111560635	True	NM_153426,NM_153427,NM_001977,NM_001204399,NM_001204398,NM_001204397	chr4,chr4,chr4,chr4,chr4,chr4	-,-,+,-,-,-	PITX2,PITX2,ENPEP,PITX2,PITX2,PITX2	2694,2694,-163153,2694,2694,2694
chr17:75316080-75316372	chr17	+	75316149	75316415	True	NM_006640,NR_036200	chr17,chr17	+,-	SEPT9,MIR4316	-609,76771
chr6:114379863-114381504	chr6	+	114379864	114381042	True	NR_027060,NM_153612	chr6,chr6	+,-	FLJ34503,HS3ST5	-154364,3049
chr13:19757374-19758331	chr13	+	19757474	19758224	True	NM_006001,NR_034026	chr13,chr13	-,+	TUBA3C,LOC100287114	-1482,160964
chr6:26519503-26520791	chr6	+	26519637	26520756	True	NR_026790,NM_024639	chr6,chr6	+,-	HCG11,ZNF322A	1177,139257
chr3:52445805-52447506	chr3	+	52445812	52447417	True	NM_173341,NM_004656,NM_016483	chr3,chr3,chr3	+,-,+	PHF7,BAP1,PHF7	-1337,-1803,-1337
chr1:36948311-36948542	chr1	+	36948434	36948504	True	NM_000760,NM_024676,NM_172313,NM_156039	chr1,chr1,chr1,chr1	-,+,-,-	CSF3R,SH3D21,CSF3R,CSF3R	461,-175777,461,461
chr2:135207410-135207885	chr2	+	135207543	135207772	True	NM_030923,NR_024275	chr2,chr2	-,+	TMEM163,LOC151162	268852,-634
chr8:133475259-133476105	chr8	+	133475306	133475999	True	NM_001204824,NM_198513	chr8,chr8	-,+	KCNQ3,PHF20L1	-15797,311604
chr19:54496566-54498045	chr19	+	54496574	54498030	True	NM_145814,NM_145815,NM_198481,NM_031897	chr19,chr19,chr19,chr19	+,+,-,+	CACNG6,CACNG6,VSTM1,CACNG6	-1083,-1083,69227,-1083
chr2:191518519-191519597	chr2	+	191518519	191519630	True	NM_005966,NM_001142645	chr2,chr2	+,-	NAB1,TMEM194B	-4723,-119051
chr4:7756128-7756507	chr4	+	7756228	7756544	True	NM_001134647,NR_026892	chr4,chr4	-,+	AFAP1,AFAP1-AS1	185159,-462
chr1:24510310-24511228	chr1	+	24510517	24511193	True	NM_170743,NM_173064,NM_173065,NR_027087	chr1,chr1,chr1,chr1	-,-,-,+	IL28RA,IL28RA,IL28RA,LOC284632	2622,2622,2622,15536
chr14:23059359-23059745	chr14	+	23059389	23059569	True	NM_022060,NM_001344	chr14,chr14	+,-	ABHD4,DAD1	7577,-1246
chr1:16847945-16848516	chr1	+	16848127	16848533	True	NR_023386,NR_037446	chr1,chr1	-,+	CROCCP3,MIR3675	-28931,26875
chr1:16847945-16848516	chr1	-	17215158	17215208	False	NM_014675,NR_037446	chr1,chr1	+,-	CROCC,MIR3675	33236,-29642
chr5:88160678-88161871	chr5	+	88161032	88161659	True	NM_001193350,NM_022650	chr5,chr5	-,+	MEF2C,RASA1	17674,-1596324
chr17:61920286-61920614	chr17	+	61920290	61920652	True	NR_002947,NM_001098426	chr17,chr17	+,-	TCAM1P,SMARCD2	13723,61
chr2:108916554-108916919	chr2	+	108916842	108916946	True	NM_176825,NR_024439	chr2,chr2	+,-	SULT1C2,LOC729121	-11812,-474259
chrX:15701017-15701698	chrX	+	15701280	15701706	True	NM_020665,NR_026551	chrX,chrX	-,+	TMEM27,CA5BP1	-18126,-8292
chr19:55476116-55476605	chr19	+	55476222	55476637	True	NM_001174083,NM_001174082,NM_001174081,NM_017852,NM_206828	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	NLRP2,NLRP2,NLRP2,NLRP2,NLRP7	1073,1073,14,1073,-17349
chr19:55476116-55476605	chr19	+	55477312	55477727	False	NM_001174083,NM_001174082,NM_017852,NM_001174081,NM_206828	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	NLRP2,NLRP2,NLRP2,NLRP2,NLRP7	-17,-17,-17,-724,-18439
chr8:42547950-42548891	chr8	+	42548161	42548780	True	NM_001199279,NM_000749	chr8,chr8	-,+	CHRNA6,CHRNB3	75206,3781
chr3:193923887-193924292	chr3	+	193923887	193924199	True	NR_024480,NM_005524	chr3,chr3	-,+	LOC100131551,HES1	106444,-70007
chr5:31531502-31531849	chr5	+	31531501	31531787	True	NM_018356,NM_013235,NM_001100412	chr5,chr5,chr5	+,-,-	C5orf22,DROSHA,DROSHA	585,545,545
chr18:55713478-55715366	chr18	+	55713848	55715344	True	NM_001144967,NM_015277,NM_001144964,NM_005603	chr18,chr18,chr18,chr18	+,+,+,-	NEDD4L,NEDD4L,NEDD4L,ATP8B1	-2288,-2288,47,-243521
chr1:117575511-117575919	chr1	+	117575517	117575869	True	NM_003594,NM_001145635	chr1,chr1	+,-	TTF2,TRIM45	27079,88592
chr19:16297168-16297747	chr19	+	16297371	16297765	True	NM_014077,NM_054113	chr19,chr19	+,-	FAM32A,CIB3	-1187,-13085
chr18:77998650-78000271	chr18	+	77998662	78000195	True	NR_028339	chr18	+	LOC100130522	-92906
chr5:162864456-162864684	chr5	+	162864462	162864652	True	NM_004060,NM_199246,NM_145266	chr5,chr5,chr5	+,+,-	CCNG1,CCNG1,NUDCD2	36,36,22541
chr9:136287609-136288189	chr9	+	136287834	136287930	True	NR_024514,NM_020385,NM_139026,NM_139027,NM_139025	chr9,chr9,chr9,chr9,chr9	+,-,+,+,+	ADAMTS13,REXO4,ADAMTS13,ADAMTS13,ADAMTS13	-8426,-4670,-765,-765,-765
chr16:66616699-66618095	chr16	+	66616837	66617901	True	NM_144673,NM_001199317,NM_004614	chr16,chr16,chr16	+,+,-	CMTM2,CMTM2,TK2	-3549,-3549,-32522
chr10:116982959-116983337	chr10	+	116983043	116983394	True	NM_207303,NM_001003408	chr10,chr10	+,-	ATRNL1,ABLIM1	-129976,-538629
chr19:10047772-10048022	chr19	+	10047827	10047979	True	NM_058164,NM_015725	chr19,chr19	-,+	OLFM2,RDH8	-757,75945
chr18:28602423-28602978	chr18	+	28602604	28603030	True	NM_001941,NM_001942	chr18,chr18	-,+	DSC3,DSG1	19807,295021
chr14:65288542-65289341	chr14	+	65288759	65289259	True	NM_001204063,NM_000347,NM_001024858	chr14,chr14,chr14	+,-,-	CHURC1,SPTB,SPTB	91819,657,657
chr1:24728228-24729382	chr1	+	24728586	24729361	True	NM_020448,NM_001199013	chr1,chr1	+,-	NIPAL3,C1orf201	12883,10959
chr4:25553056-25553577	chr4	+	25553055	25553451	True	NM_015187,NM_001177998	chr4,chr4	-,+	SEL1L3,SLC34A2	311217,103983
chr22:46480176-46480507	chr22	+	46480201	46480501	True	NR_037413,NM_018280,NR_027033	chr22,chr22,chr22	+,-,+	MIR3619,C22orf26,LOC400931	6422,-30177,1375
chr9:4814024-4814393	chr9	+	4814193	4814430	True	NM_005772,NM_001199853	chr9,chr9	+,-	RCL1,AK3	-21418,-72150
chr19:1406672-1407266	chr19	+	1406675	1407241	True	NM_138924,NM_018959,NM_170711,NM_000156	chr19,chr19,chr19,chr19	-,+,+,-	GAMT,DAZAP1,DAZAP1,GAMT	-5123,342,342,-5123
chr17:78233717-78234014	chr17	+	78233813	78233879	True	NM_000199,NM_020914,NM_020954	chr17,chr17,chr17	-,+,+	SGSH,RNF213,RNF213	-39614,787,787
chr2:79762623-79763918	chr2	+	79762810	79763614	True	NM_004389,NR_036231	chr2,chr2	+,-	CTNNA2,MIR4264	-22808,112931
chr14:103672282-103672716	chr14	+	103672344	103672576	True	NR_033938,NM_006291	chr14,chr14	-,+	LOC100131366,TNFAIP2	-16979,-79731
chr19:56687776-56687976	chr19	+	56687779	56688025	True	NM_001145546,NM_001080456,NM_033106	chr19,chr19,chr19	+,-,+	GALP,ZSCAN5B,GALP	-441,16446,-441
chr19:56687776-56687976	chr19	+	56687529	56687579	False	NM_001145546,NM_001080456,NM_033106	chr19,chr19,chr19	+,-,+	GALP,ZSCAN5B,GALP	-191,16892,-191
chr1:20496509-20496739	chr1	+	20496583	20496781	True	NM_001105572,NM_152376	chr1,chr1	-,+	PLA2G2C,UBXN10	4956,15796
chr12:53848631-53850164	chr12	+	53848848	53849910	True	NM_001128911,NM_001128912,NM_001128913,NM_001128914,NM_031989,NM_005016,NM_001193511,NM_001098620	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,+,+,+,+,-,+	PCBP2,PCBP2,PCBP2,PCBP2,PCBP2,PCBP2,MAP3K12,PCBP2	-3019,-3019,-3019,-3019,-3019,-3019,43585,-3019
chr1:162757950-162758935	chr10	+	38643034	38643475	False	NR_027269,NR_003086	chr10,chr10	-,+	SEPT7L,HSD17B7P2	48356,1832
chr1:162757950-162758935	chr1	+	162758244	162758687	True	NM_178550,NM_016371	chr1,chr1	-,+	C1orf110,HSD17B7	79969,1808
chr6:90020958-90021298	chr6	+	90020977	90021205	True	NM_014942,NM_002043	chr6,chr6	+,-	ANKRD6,GABRR2	121691,3812
chr15:37112147-37113078	chr15	+	37112147	37112888	True	NR_027320,NM_032499	chr15,chr15	-,+	CSNK1A1P1,C15orf41	-1440,-179397
chr7:156743637-156743946	chr7	+	156743682	156743863	True	NM_022458,NM_138400	chr7,chr7	-,+	LMBR1,NOM1	-57780,-1316
chr16:53537879-53538291	chr16	+	53537916	53538310	True	NM_022476,NM_001012398,NM_005611	chr16,chr16,chr16	-,-,+	AKTIP,AKTIP,RBL2	-746,-746,-69616
chr1:43853988-43854947	chr1	+	43854100	43854984	True	NM_001012961,NM_201542,NM_052877	chr1,chr1,chr1	+,-,-	C1orf84,MED8,MED8	571,549,549
chr9:79007936-79008416	chr9	+	79007935	79008469	True	NM_018339,NR_026890	chr9,chr9	-,+	RFK,RPSAP9	1029,5045
chr12:96342357-96343919	chr12	+	96342974	96343953	True	NM_152435,NM_182496	chr12,chr12	+,-	AMDHD1,CCDC38	-5954,-6546
chr16:12026487-12027942	chr16	+	12027702	12027789	True	NM_001192,NM_001130007	chr16,chr16	+,-	TNFRSF17,GSPT1	31174,-17183
chr3:158835093-158835654	chr3	+	158835126	158835687	True	NM_002888,NM_001197114	chr3,chr3	-,+	RARRES1,IQCJ-SCHIP1	-384851,-48136
chr22:45683010-45683702	chr22	+	45683044	45683468	True	NM_006953,NM_001009880,NM_001167574	chr22,chr22,chr22	+,-,+	UPK3A,KIAA0930,UPK3A	-2227,-46394,-2227
chrX:2995009-2995399	chrX	+	2995124	2995313	True	NM_000047,NM_004042	chrX,chrX	-,+	ARSE,ARSF	-112630,-10335
chr5:125759243-125759445	chr5	+	125759295	125759413	True	NM_023927,NM_001182,NM_001146321,NM_001146320	chr5,chr5,chr5,chr5	+,-,+,+	GRAMD3,ALDH7A1,GRAMD3,GRAMD3	-477,171719,-477,-477
chr2:185504652-185505827	chr2	+	185504773	185505674	True	NM_194250,NM_205842	chr2,chr2	+,-	ZNF804A,NCKAP1	-41741,-1601544
chr5:92605854-92607601	chr5	+	92606070	92607336	True	NR_015369,NM_005654	chr5,chr5	-,+	FLJ42709,NR2F1	299213,311706
chr16:19535205-19535447	chr16	+	19535234	19535480	True	NM_001199022,NM_014711,NM_016641	chr16,chr16,chr16	+,+,-	CP110,CP110,GDE1	-106,-106,-1784
chr17:61628459-61628674	chr17	+	61628485	61628723	True	NM_005828,NM_001915	chr17,chr17	+,-	DCAF7,CYB561	-714,-104763
chr3:21448064-21448407	chr3	+	21448125	21448457	True	NR_002311,NM_024697	chr3,chr3	+,-	VENTXP7,ZNF385D	-963,344410
chr1:227751597-227752523	chr1	+	227751678	227752367	True	NR_036753,NR_033184,NM_178549	chr1,chr1,chr1	-,+,+	ZNF847P,ZNF678,ZNF678	133102,-509,-509
chr4:186876455-186877445	chr4	+	186876531	186877385	True	NM_021069,NM_003265	chr4,chr4	-,+	SORBS2,TLR3	535,112923
chr16:31439222-31439548	chr16	+	31439313	31439485	True	NM_001105247,NM_005205	chr16,chr16	+,-	ARMC5,COX6A2	30831,314
chr22:39549569-39550013	chr22	+	39549670	39550034	True	NM_181773,NM_175709	chr22,chr22	+,-	APOBEC3H,CBX7	-56492,-1132
chr8:146127492-146127895	chr8	+	146127513	146127943	True	NM_001109689,NM_021061,NM_003416	chr8,chr8,chr8	-,-,+	ZNF250,ZNF250,ZNF7	-667,-667,-74661
chr11:59269964-59270407	chr11	+	59270252	59270408	True	NM_001001954,NM_001004706	chr11,chr11	-,+	OR5A2,OR4D11	-79826,640
chr5:140864839-140865423	chr5	+	140864868	140865380	True	NM_002588,NM_018929,NM_018928,NM_001079812,NM_032406,NM_032407,NM_032402,NM_032403	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,-,+,+,+,+	PCDHGC3,PCDHGC5,PCDHGC4,DIAPH1,PCDHGC4,PCDHGC5,PCDHGC3,PCDHGC3	-9350,3427,-178,133292,-178,3427,-9350,-9350
chr13:110437597-110437864	chr13	+	110437633	110437745	True	NM_003749,NM_001846	chr13,chr13	-,+	IRS2,COL4A2	1219,521885
chr11:8178437-8179096	chr11	+	8178523	8179134	True	NM_177972,NM_001135109	chr11,chr11	+,-	TUB,RIC3	-75675,11507
chr2:220119403-220119863	chr2	+	220119459	220119673	True	NM_006000,NR_003063,NR_026909,NM_024506,NM_001008910	chr2,chr2,chr2,chr2,chr2	-,+,+,-,+	TUBA4A,TUBA4B,STK16,GLB1L,STK16	-821,-1545,-9309,-9328,-9318
chr6:135221604-135222857	chr6	+	135221996	135222500	True	NM_001193480,NM_005375	chr6,chr6	-,+	ALDH8A1,MYB	48811,279952
chr2:220037396-220038029	chr2	+	220037501	220038043	True	NM_024293,NM_001144889,NM_001144890,NM_015680,NM_144712	chr2,chr2,chr2,chr2,chr2	+,-,-,-,-	FAM134A,SLC23A3,SLC23A3,CNPPD1,SLC23A3	4895,-2684,-2684,3709,-2684
chr1:146735009-146736108	chr1	+	146735316	146736118	True	NM_004284,NM_001461	chr1,chr1	+,-	CHD1L,FMO5	-21076,-38086
chr5:64776831-64777358	chr5	+	64777074	64777403	True	NM_015342,NM_197941	chr5,chr5	+,-	PPWD1,ADAMTS6	81727,351
chr11:17502373-17504289	chr11	+	17502538	17504231	True	NM_000352,NM_001202439	chr11,chr11	-,+	ABCC8,DKFZp686O24166	-4089,-129280
chr2:222824121-222825659	chr2	+	222824164	222825583	True	NM_153038,NM_001127366	chr2,chr2	+,-	CCDC140,PAX3	337282,338182
chrX:13741580-13742776	chrX	+	13741717	13742751	True	NM_001011658,NM_003611	chrX,chrX	-,+	TRAPPC2,OFD1	10053,10080
chr1:20917688-20919271	chr1	+	20917912	20919279	True	NM_001785,NM_005216	chr1,chr1	+,-	CDA,DDOST	-2519,68808
chr6:149886163-149886408	chr6	+	149886249	149886451	True	NM_139126,NM_138785	chr6,chr6	-,+	PPIL4,C6orf72	-19078,1076
chr5:523362-523678	chr5	+	523440	523698	True	NM_007277,NM_004174	chr5,chr5	+,-	EXOC3,SLC9A3	-80157,901
chr10:47657863-47658395	chr10	+	47657884	47658252	True	NR_003601,NR_024495	chr10,chr10	+,-	ANTXRL,LOC642826	-15,-414390
chrX:84256846-84258175	chrX	+	84257062	84258021	True	NM_001012980,NM_198450	chrX,chrX	-,+	SATL1,APOOL	106010,876
chr8:71551688-71551917	chr8	+	71551688	71551874	True	NM_016027,NM_001011720	chr8,chr8	-,+	LACTB2,XKR9	29629,29725
chr4:74573268-74574053	chr4	+	74573369	74574079	True	NM_000584,NM_201431	chr4,chr4	+,-	IL8,RASSF6	32143,-87029
chr7:129691248-129691517	chr7	+	129691332	129691480	True	NM_016478,NM_014997	chr7,chr7	-,+	ZC3HC1,KLHDC10	-99,18868
chr22:21319788-21320990	chr22	+	21319952	21321010	True	NM_001018060,NM_001008695,NR_027464,NM_001146288,NM_144704	chr22,chr22,chr22,chr22,chr22	+,-,+,+,+	AIFM3,THAP7,AIFM3,AIFM3,AIFM3	-585,35444,436,436,-585
chr1:204653892-204654223	chr1	+	204653900	204654174	True	NM_201630,NM_001005389,NM_006338	chr1,chr1,chr1	-,+,-	LRRN2,NFASC,LRRN2	473,143607,357
chr1:86850894-86852364	chr1	+	86851039	86851864	True	NM_001184765,NM_006536	chr1,chr1	-,+	ODF2L,CLCA2	10218,37904
chr19:12999651-13000716	chr19	+	12999949	13000738	True	NM_006563,NM_001375,NM_000159,NM_013976	chr19,chr19,chr19,chr19	-,-,+,+	KLF1,DNASE2,GCDH,GCDH	-1932,-7614,1235,1235
chr10:92631294-92631835	chr10	+	92631359	92631787	True	NM_019860,NM_001104546,NM_006413	chr10,chr10,chr10	-,+,+	HTR7,RPP30,RPP30	-13688,37,37
chr20:58517254-58519157	chr20	+	58517470	58519053	True	NM_022106,NM_001190827,NM_006242,NM_001190826	chr20,chr20,chr20,chr20	+,+,-,+	C20orf177,C20orf177,PPP1R3D,C20orf177	-2077,-2077,-2118,-8702
chr20:36667157-36667897	chr20	+	36667282	36667783	True	NM_021215,NM_014657	chr20,chr20	+,-	RPRD1B,TTI1	-5393,-5449
chr13:28764171-28766035	chr13	+	28765029	28765766	True	NR_029383,NM_175854	chr13,chr13	-,+	LOC100288730,PAN3	-51718,-52448
chr13:49996428-49996867	chr13	+	49996550	49996913	True	NM_031915,NM_030925	chr13,chr13	+,-	SETDB2,CAB39L	21515,-20815
chr6:72128698-72129099	chr6	+	72128729	72129086	True	NM_024576,NR_026807	chr6,chr6	+,-	OGFRL1,C6orf155	-130316,1419
chr5:95159148-95159456	chr5	+	95159165	95159459	True	NR_026936,NM_002064,NM_001118890	chr5,chr5,chr5	+,-,-	C5orf27,GLRX,GLRX	28476,-588,-588
chr19:57049278-57049637	chr19	+	57049292	57049504	True	NR_030740,NM_020828	chr19,chr19	-,+	ZNF667,ZFP28	-60522,812
chr11:67145125-67145707	chr11	+	67145177	67145565	True	NM_001166212,NM_004584,NM_013246	chr11,chr11,chr11	-,+,-	CLCF1,RAD9A,CLCF1	-3529,13857,-3971
chr1:67412789-67413595	chr1	+	67412811	67413505	True	NM_001077704,NM_207014	chr1,chr1	+,-	MIER1,WDR78	-16947,-22241
chr4:21307269-21308188	chr4	+	21307279	21308206	True	NM_145048,NM_147183	chr4,chr4	+,-	PACRGL,KCNIP4	-605294,-1750
chr17:7483942-7484714	chr17	+	7484037	7484687	True	NM_001416,NR_002918,NM_004870,NM_001040059,NR_002912,NR_024603,NR_002604,NM_001251,NM_001204510,NM_006942	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,+,+,+,+,-	EIF4A1,SNORA48,MPDU1,CD68,SNORA67,MPDU1,SNORD10,CD68,EIF4A1,SOX15	-8064,-6057,2277,-1282,-2815,2277,-3959,-1283,-8064,8851
chr2:3623352-3623813	chr2	+	3623355	3623780	True	NM_001011,NM_002936	chr2,chr2	+,-	RPS7,RNASEH1	-553,-17415
chr6:122754045-122755362	chr6	+	122754089	122755156	True	NM_020755,NM_004506	chr6,chr6	-,+	SERINC1,HSF2	37857,-33458
chr19:19145243-19145488	chr19	+	19145248	19145382	True	NM_001017392,NM_014884,NM_033415,NM_001199196	chr19,chr19,chr19,chr19	-,-,+,+	SUGP2,SUGP2,ARMC6,ARMC6	-868,-868,-912,-912
chr17:6731556-6732324	chr17	+	6731605	6732031	True	NR_002710,NM_053285	chr17,chr17	+,-	ALOX12P2,TEKT1	24863,3079
chr1:937943-938527	chr1	+	938315	938385	True	NM_005101,NM_021170,NM_001142467	chr1,chr1,chr1	+,-,-	ISG15,HES4,HES4	10461,-2763,-2763
chr12:69201198-69201475	chr12	+	69201425	69201503	True	NM_001005502,NM_002392	chr12,chr12	-,+	CPM,MDM2	125526,467
chr1:118148177-118148540	chr1	+	118148302	118148508	True	NM_017686,NM_017709	chr1,chr1	-,+	GDAP2,FAM46C	323844,95
chr19:4904162-4905287	chr19	+	4904683	4905054	True	NM_001080523,NM_001048201,NM_013282	chr19,chr19,chr19	-,+,+	ARRDC5,UHRF1,UHRF1	-1804,4455,5511
chr11:60609730-60610035	chr11	+	60609873	60610027	True	NM_004778,NM_024098	chr11,chr11	-,+	GPR44,CCDC86	13467,-495
chr17:39728433-39729245	chr17	+	39728504	39729270	True	NM_000226,NM_005801	chr17,chr17	-,+	KRT9,EIF1	-194,115856
chr9:88968066-88968660	chr9	+	88968072	88968645	True	NM_001185059,NM_001185074,NM_024617,NM_024635	chr9,chr9,chr9,chr9	-,-,-,+	ZCCHC6,ZCCHC6,ZCCHC6,NAA35	807,807,807,-412074
chr2:207830473-207831741	chr2	+	207830569	207831692	True	NM_173077,NR_036227	chr2,chr2	+,-	CPO,MIR2355	-26344,143155
chr16:81269900-81270573	chr16	+	81270292	81270409	True	NM_017429,NM_001076780	chr16,chr16	+,-	BCMO1,PKD1L2	1886,-16317
chr9:116038059-116038507	chr9	+	116038197	116038559	True	NM_139286,NM_004697	chr9,chr9	-,+	CDC26,PRPF4	-328,-274
chr7:150929190-150929426	chr7	+	150929189	150929307	True	NM_007189,NM_005692,NR_030407,NM_019015	chr7,chr7,chr7,chr7	-,-,+,+	ABCF2,ABCF2,MIR671,CHPF2	-4872,-4872,6199,277
chr11:56170060-56171232	chr11	+	56170510	56171248	True	NM_001004744,NM_001013356	chr11,chr11	-,+	OR5R1,OR8U8	14510,-27461
chr17:9480159-9480361	chr17	+	9480253	9480409	True	NR_033656,NM_001080556,NM_145054,NM_004853	chr17,chr17,chr17,chr17	-,+,+,-	STX8,WDR16,WDR16,STX8	-978,-360,-360,-978
chr7:99102276-99102521	chr7	+	99102292	99102480	True	NM_145102,NM_014569,NM_032164	chr7,chr7,chr7	+,+,-	ZKSCAN5,ZKSCAN5,ZNF394	-70,92,-4415
chr15:65495565-65496823	chr15	+	65495665	65496753	True	NM_001101362,NM_003613	chr15,chr15	+,-	KBTBD13,CILP	-126562,7137
chr19:54330956-54331190	chr19	+	54330979	54331062	True	NM_001020820,NM_144687	chr19,chr19	+,-	MYADM,NLRP12	38548,-3331
chr9:138373946-138374994	chr9	+	138373983	138374743	True	NM_014811,NM_001048265	chr9,chr9	+,-	KIAA0649,C9orf116	-2393,17070
chr21:43826563-43827297	chr21	+	43826702	43827220	True	NM_018961,NM_032405,NM_001001895	chr21,chr21,chr21	+,-,+	UBASH3A,TMPRSS3,UBASH3A	-2745,-10502,-2745
chr10:118504567-118505637	chr10	+	118504582	118505379	True	NM_025015,NM_005396	chr10,chr10	-,+	HSPA12A,PNLIPRP2	-2497,-124169
chr21:47514768-47515635	chr21	+	47514780	47515566	True	NM_001849,NM_058174,NM_058175,NM_006657	chr21,chr21,chr21,chr21	+,+,+,-	COL6A2,COL6A2,COL6A2,FTCD	2466,2466,2466,59965
chr1:27973550-27974283	chr1	+	27973617	27974197	True	NM_001143912,NM_005248	chr1,chr1	+,-	FAM76A,FGR	78292,-11890
chr17:43023945-43024293	chr17	+	43023966	43024168	True	NM_001080443,NM_213607	chr17,chr17	-,+	KIF18B,CCDC103	964,-46876
chr19:37828638-37829183	chr19	+	37828687	37829002	True	NM_181786,NR_029390	chr19,chr19	+,-	HKR1,LOC284412	-3168,-68775
chr11:131159551-131161057	chr11	+	131159722	131160900	True	NM_001048209,NM_014758	chr11,chr11	+,-	NTM,SNX19	79470,-373340
chr10:60312186-60314095	chr10	+	60312521	60314101	True	NM_001080512,NM_152230	chr10,chr10	+,-	BICC1,IPMK	-39670,-284827
chr10:69595420-69595942	chr10	+	69595569	69595776	True	NM_201262,NM_021800,NM_012238	chr10,chr10,chr10	-,-,+	DNAJC12,DNAJC12,SIRT1	2224,2224,48650
chr6:14867957-14868688	chr6	+	14867963	14868523	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	378003,794816
chr1:110254089-110254484	chr1	+	110254145	110254421	True	NM_000851,NM_000849	chr1,chr1	+,-	GSTM5,GSTM3	442,29289
chr1:110254089-110254484	chr1	+	110229705	110229766	False	NM_000561,NM_000849,NM_146421	chr1,chr1,chr1	+,-,+	GSTM1,GSTM3,GSTM1	651,53955,651
chr13:72441169-72441376	chr13	+	72441216	72441412	True	NM_004392,NM_080760,NM_024808,NM_080759	chr13,chr13,chr13,chr13	-,-,+,-	DACH1,DACH1,C13orf34,DACH1	-22,-22,860629,-22
chr2:20184866-20185364	chr2	+	20184869	20185343	True	NM_001006657,NR_033875,NM_020779	chr2,chr2,chr2	-,+,-	WDR35,FLJ12334,WDR35	4597,-116305,4597
chr8:144098837-144099233	chr8	+	144098908	144099246	True	NM_002346,NM_001127213,NR_026913	chr8,chr8,chr8	+,+,-	LY6E,LY6E,LOC100133669	655,655,611
chr1:203054642-203054843	chr1	+	203054684	203054892	True	NM_015053,NM_002479	chr1,chr1	+,-	PPFIA4,MYOG	-34424,535
chr3:14719098-14721015	chr3	+	14719624	14720758	True	NM_001184957,NM_001080423,NM_001184958,NM_032137	chr3,chr3,chr3,chr3	+,-,+,+	C3orf20,GRIP2,C3orf20,C3orf20	-3069,-136036,-3069,-3069
chr5:79710454-79711577	chr5	+	79710498	79711494	True	NR_003665,NM_014733,NM_001105251	chr5,chr5,chr5	-,+,+	CRSP8P,ZFYVE16,ZFYVE16	-62713,-6721,-6721
chr8:19537445-19537921	chr8	+	19537446	19537675	True	NR_024040,NM_018371,NM_018142	chr8,chr8,chr8	-,-,+	CSGALNACT1,CSGALNACT1,INTS10	2641,2474,137242
chr2:172375734-172377291	chr2	+	172376063	172377129	True	NM_024843,NM_001127383,NM_024770	chr2,chr2,chr2	+,+,-	CYBRD1,CYBRD1,METTL8	1736,1736,-84751
chr22:24980755-24981932	chr22	+	24980766	24981834	True	NM_207644,NM_013430	chr22,chr22	-,+	C22orf36,GGT1	7251,-1099
chr9:133770340-133770684	chr9	+	133770384	133770718	True	NM_005157,NM_198180	chr9,chr9	+,-	ABL1,QRFP	-59604,-1159
chr12:70195839-70197449	chr12	+	70196009	70197172	True	NM_001024647,NM_032735	chr12,chr12	+,-	RAB3IP,BEST3	-23313,-102813
chr17:53037443-53038313	chr17	+	53037938	53038356	True	NM_001162862,NM_001162861,NM_178509,NR_027941,NR_027942,NM_004375	chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,-,-,-	COX11,COX11,STXBP4,COX11,COX11,COX11	7758,7758,7769,7758,7758,7758
chr5:127856293-127857449	chr5	+	127856293	127857407	True	NM_001046,NM_001999	chr5,chr5	+,-	SLC12A2,FBN2	-436861,16378
chr12:48103284-48103577	chr12	+	48103286	48103600	True	NM_001146076,NM_001146075,NM_017842,NM_024604	chr12,chr12,chr12,chr12	-,-,+,-	RPAP3,RPAP3,SLC48A1,RPAP3	-3442,-3442,63366,-3442
chr11:1609535-1610532	chr11	+	1609738	1610581	True	NM_001005922,NR_021489,NM_001004325	chr11,chr11,chr11	-,+,-	KRTAP5-1,LOC338651,KRTAP5-2	-3225,-15818,8993
chr3:53105296-53106294	chr3	+	53105312	53106252	True	NM_016329,NM_006254	chr3,chr3	-,+	SFMBT1,PRKCD	-25223,88970
chrX:73834126-73834487	chrX	+	73834140	73834476	True	NM_183353,NM_016120,NM_006517	chrX,chrX,chrX	-,-,+	RLIM,RLIM,SLC16A2	35,35,-193106
chr18:55020253-55020658	chr18	+	55020335	55020509	True	NM_015879,NM_000140	chr18,chr18	+,-	ST8SIA3,FECH	-665,233510
chr12:132851042-132851669	chr12	+	132851117	132851623	True	NM_001122636,NR_024563	chr12,chr12	-,+	GALNT9,LOC100130238	54332,353
chr5:67578505-67579574	chr5	+	67578541	67579597	True	NM_181524,NM_181504,NM_176816	chr5,chr5,chr5	+,+,-	PIK3R1,PIK3R1,CCDC125	4654,6897,1036863
chr1:247577858-247578838	chr1	+	247578246	247578874	True	NM_183395,NM_001079821,NM_004895,NM_001127461,NM_001004492,NM_001127462	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,-,+	NLRP3,NLRP3,NLRP3,NLRP3,OR2B11,NLRP3	2476,583,2476,583,36460,2476
chr11:5637474-5639454	chr11	+	5637739	5639363	True	NM_033034,NM_021616,NM_001003827	chr11,chr11,chr11	-,+,+	TRIM5,TRIM34,TRIM34	67026,6843,1810
chr6:109406645-109407281	chr6	+	109406766	109407189	True	NM_014454,NM_001083535	chr6,chr6	-,+	SESN1,CEP57L1	8581,9166
chr16:30663204-30664133	chr16	+	30663321	30664030	True	NM_138447,NM_024031	chr16,chr16	-,+	ZNF689,PRR14	-41639,-1131
chr4:103749008-103749249	chr4	+	103749096	103749264	True	NM_001008388,NM_003340,NM_181887,NM_181886,NM_181892,NM_181889,NM_181888,NM_181891	chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4	+,-,-,-,-,-,-,-	CISD2,UBE2D3,UBE2D3,UBE2D3,UBE2D3,UBE2D3,UBE2D3,UBE2D3	40870,1,-388,1,-756,93,1,-388
chr10:102791417-102791785	chr10	+	102791416	102791764	True	NM_001195263,NM_024895,NM_030971	chr10,chr10,chr10	-,-,+	PDZD7,PDZD7,SFXN3	-502,-502,-471
chr1:159827287-159827901	chr1	+	159827419	159827943	True	NM_020125,NM_001013661,NM_001134233	chr1,chr1,chr1	+,-,-	SLAMF8,VSIG8,C1orf204	-30991,4554,-2282
chr2:223724113-223725557	chr2	+	223724455	223725298	True	NM_005687,NM_203372,NM_004457	chr2,chr2,chr2	-,+,+	FARSB,ACSL3,ACSL3	-203628,433,433
chr4:154074143-154074480	chr4	+	154074226	154074488	True	NM_001130067,NR_001562	chr4,chr4	+,-	TRIM2,ANXA2P1	-7,155525
chr9:139845034-139846189	chr9	+	139845152	139846040	True	NM_000606,NM_018998,NM_178536	chr9,chr9,chr9	+,-,+	C8G,FBXW5,LCN12	-5505,-5979,727
chr19:10444217-10444519	chr19	+	10444226	10444557	True	NM_002162,NM_133452,NM_003259	chr19,chr19,chr19	-,-,+	ICAM3,RAVER1,ICAM5	5838,88,-43622
chr19:10956963-10958208	chr19	+	10957281	10958029	True	NM_001136482,NM_006858	chr19,chr19	+,-	C19orf38,TMED1	1076,-10298
chr1:200864025-200864507	chr1	+	200864056	200864436	True	NM_001142569,NM_018265,NM_017596	chr1,chr1,chr1	+,+,-	C1orf106,C1orf106,KIF21B	-108,-3468,128442
chr2:161053120-161053729	chr2	+	161053261	161053603	True	NM_000888,NM_022826	chr2,chr2	-,+	ITGB6,MARCH7	3043,-484309
chr8:22784493-22785401	chr8	+	22784503	22785417	True	NM_144962,NM_001160036	chr8,chr8	-,+	PEBP4,RHOBTB2	54,59512
chr5:149547979-149548514	chr5	+	149548068	149548427	True	NM_001804,NM_002609	chr5,chr5	+,-	CDX1,PDGFRB	-1782,-12646
chrX:152759824-152760288	chrX	+	152759897	152760283	True	NM_001711,NM_017518	chrX,chrX	+,-	BGN,HAUS7	63,-23294
chr22:39473984-39474369	chr22	+	39474315	39474377	True	NM_021822,NM_175709	chr22,chr22	+,-	APOBEC3G,CBX7	-1361,74213
chr22:32590862-32591526	chr22	+	32590922	32591314	True	NM_001098527,NR_033411,NM_006605,NM_001159546,NM_001159545	chr22,chr22,chr22,chr22,chr22	-,+,-,-,-	RFPL2,SLC5A1,RFPL2,RFPL2,RFPL2	8206,-135825,-1456,7279,9460
chr22:32590862-32591526	chr22	-	29832734	29832800	False	NR_002727,NM_021026	chr22,chr22	-,+	RFPL1S,RFPL1	5377,1771
chr15:41705148-41707107	chr15	+	41706118	41706725	True	NM_016013,NM_015138	chr15,chr15	-,+	NDUFAF1,RTF1	-11476,2576
chr12:85484246-85485473	chr12	+	85484250	85485508	True	NM_001100917,NM_001079910	chr12,chr12	-,+	TSPAN19,LRRIQ1	-54195,-54202
chr6:87831636-87832163	chr6	+	87831715	87832143	True	NM_000735,NM_015021	chr6,chr6	-,+	CGA,ZNF292	-26891,33125
chr5:132009794-132010098	chr5	+	132009801	132010123	True	NM_007054,NM_172348,NM_000589	chr5,chr5,chr5	-,+,+	KIF3A,IL4,IL4	63192,-479,-479
chr3:101291367-101292683	chr3	+	101291807	101292705	True	NM_020654,NM_020357	chr3,chr3	-,+	SENP7,PCNP	-59722,336
chr9:123643516-123644170	chr9	+	123643775	123644003	True	NM_015651,NR_024408,NM_001009936	chr9,chr9,chr9	-,+,-	PHF19,LOC253039,PHF19	-4169,-38506,-4169
chr12:4833287-4833578	chr12	+	4833339	4833621	True	NM_006422,NM_017417	chr12,chr12	-,+	AKAP3,GALNT8	-78996,-3650
chr19:16580209-16581052	chr19	+	16580227	16580863	True	NM_021235,NM_032207	chr19,chr19	-,+	EPS15L1,C19orf44	1949,26341
chr6:41709993-41711033	chr6	+	41710135	41710955	True	NM_001166424,NM_007162,NM_013397,NM_001167827,NM_002630	chr6,chr6,chr6,chr6,chr6	-,-,+,-,-	PGC,TFEB,PRICKLE4,TFEB,PGC	4234,-7337,37544,-6138,4234
chr13:88324376-88324612	chr13	+	88324512	88324574	True	NM_015567,NR_033829	chr13,chr13	+,-	SLITRK5,LOC642345	295,-1294
chr17:32485884-32487101	chr17	+	32485898	32487035	True	NM_002982,NM_001094	chr17,chr17	+,-	CCL2,ACCN1	95260,-2073
chr5:132209233-132209745	chr5	+	132209301	132209793	True	NM_014402,NM_052971,NM_005260	chr5,chr5,chr5	+,+,-	UQCRQ,LEAP2,GDF9	-7040,-1,-8824
chr1:234612853-234613691	chr1	+	234613018	234613732	True	NM_001012985,NM_005646	chr1,chr1	+,-	C1orf31,TARBP1	-103648,1167
chr2:70419031-70420066	chr2	+	70419344	70419889	True	NM_016297,NM_017880	chr2,chr2	+,-	PCYOX1,C2orf42	65341,-1193
chr6:34543013-34543301	chr6	+	34543021	34543319	True	NM_001199583,NM_012391	chr6,chr6	+,-	PACSIN1,SPDEF	-60423,-18930
chr11:3664200-3664601	chr11	+	3664248	3664444	True	NM_001079536,NM_053017,NM_004314	chr11,chr11,chr11	-,-,+	ART5,ART5,ART1	-702,-763,1916
chr4:186317604-186317818	chr4	+	186317652	186317796	True	NM_181726,NM_018409	chr4,chr4	+,-	ANKRD37,LRP2BP	43,-17500
chr14:67655972-67657233	chr14	+	67656056	67656482	True	NM_173526,NM_015994	chr14,chr14	+,-	FAM71D,ATP6V1D	1,170288
chr7:66136198-66137087	chr7	+	66136319	66136669	True	NM_153033,NR_002933	chr7,chr7	+,-	KCTD7,LOC493754	-42502,-92821
chr7:66136198-66137087	chr7	+	66099540	66099590	False	NM_153033,NM_001167961,NR_002933	chr7,chr7,chr7	+,+,-	KCTD7,KCTD7,LOC493754	-5723,-5723,-56042
chr16:28983828-28984634	chr16	+	28983827	28984156	True	NM_024816,NM_001142448,NM_001142449,NM_001142451,NM_001142450,NM_032038	chr16,chr16,chr16,chr16,chr16,chr16	-,+,+,+,+,+	RABEP2,SPNS1,SPNS1,SPNS1,SPNS1,SPNS1	-47295,1939,1939,1939,1939,1939
chr7:74346758-74346990	chr7	+	74346886	74347034	True	NM_001025202,NM_001145063	chr7,chr7	-,+	STAG3L2,GATSL1	-40155,32048
chr7:74346758-74346990	chr7	-	99884783	99885119	False	NM_001004351,NR_028038	chr7,chr7	+,-	SPDYE3,GATS	20205,-14928
chr7:74346758-74346990	chr7	+	72537392	72537496	False	NR_003664,NR_003580	chr7,chr7	-,+	SPDYE8P,LOC100093631	-37083,31515
chr7:74346758-74346990	chr7	-	74685139	74685243	False	NM_001003795,NR_003580	chr7,chr7	+,-	GTF2IRD2B,LOC100093631	-176843,-31680
chr7:74346758-74346990	chr7	-	74899396	74899500	False	NM_001145064,NR_003664	chr7,chr7	-,+	GATSL2,SPDYE8P	-32055,37032
chr4:90204563-90205005	chr4	+	90204619	90205047	True	NM_145715,NM_198281	chr4,chr4	+,-	TIGD2,GPRIN3	-170703,24164
chr2:107102906-107103195	chr2	+	107102931	107102991	True	NM_001144013,NR_003506	chr2,chr2	-,+	RGPD3,PLGLA	-18130,-100213
chr2:107102906-107103195	chr2	-	87089879	87089933	False	NR_037931,NM_172101,NM_172102,NM_001178100,NM_172213,NM_004931	chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-	LOC100286979,CD8B,CD8B,CD8B,CD8B,CD8B	-982,-832,-832,-832,-832,-832
chr17:20526075-20526757	chr17	+	20526295	20526628	True	NM_001190790,NR_029393	chr17,chr17	+,-	CDRT15L2,KRT16P3	-43321,-118484
chr19:33572188-33573864	chr19	+	33572234	33573458	True	NM_033103,NM_018025	chr19,chr19	-,+	RHPN2,GPATCH1	-16410,-499
chr2:173422933-173423343	chr2	+	173423113	173423365	True	NR_026995,NM_002610	chr2,chr2	-,+	LOC91149,PDK1	177619,-2396
chr1:233464556-233464970	chr1	+	233464754	233464990	True	NM_032435,NM_014801	chr1,chr1	+,-	KIAA1804,PCNXL2	-1291,-33295
chr7:30721589-30721939	chr7	+	30721603	30721975	True	NM_001202483,NM_001202482,NM_001199219,NM_001883	chr7,chr7,chr7,chr7	-,-,+,-	CRHR2,CRHR2,INMT,CRHR2	216,216,69775,216
chr21:33985202-33985447	chr21	+	33985239	33985447	True	NR_036552,NR_024622,NM_021254	chr21,chr21,chr21	-,+,-	C21orf59,C21orf49,C21orf59	-326,158963,-321
chr14:64805952-64806845	chr14	+	64806182	64806827	True	NM_005956,NR_033777,NM_001040276	chr14,chr14,chr14	+,-,-	MTHFD1,TEX21P,ESR2	47931,7565,-914
chr3:122101166-122101794	chr3	+	122101208	122101774	True	NM_014367,NM_001017928	chr3,chr3	+,-	FAM162A,CCDC58	1248,350
chr10:5740591-5742548	chr10	+	5740898	5742583	True	NM_017782,NR_037164	chr10,chr10	+,-	C10orf18,ASB13	-14159,-32340
chr11:64685322-64685649	chr11	+	64685355	64685698	True	NM_015104,NM_006244	chr11,chr11	-,+	ATG2A,PPP2R5B	-633,6444
chr14:50233443-50234279	chr14	+	50233652	50234277	True	NM_001197331,NM_014315	chr14,chr14	-,+	POLE2,KLHDC2	-78554,509
chr14:20896482-20898045	chr14	+	20896560	20897996	True	NM_001109997,NM_001641	chr14,chr14	-,+	KLHL33,APEX1	5855,25293
chr1:35546811-35548300	chr1	+	35546846	35548275	True	NM_024772,NM_007167	chr1,chr1	+,-	ZMYM1,ZMYM6	-1934,-49277
chr18:51883322-51883787	chr18	+	51883389	51883759	True	NM_173529,NM_139171	chr18,chr18	+,-	C18orf54,STARD6	1411,-2446
chr1:16678987-16679223	chr1	+	16679064	16679271	True	NM_018994,NM_001114600	chr1,chr1	-,+	FBXO42,C1orf144	-116,14311
chr8:61189247-61190985	chr8	+	61189359	61190862	True	NM_004056,NM_002865	chr8,chr8	-,+	CA8,RAB2A	3148,238696
chr20:3447176-3448608	chr20	+	3447179	3448575	True	NM_139321,NM_001009984,NM_139322	chr20,chr20,chr20	+,-,+	ATRN,C20orf194,ATRN	3089,-58924,3089
chr14:24611124-24611628	chr14	+	24611157	24611573	True	NM_017999,NM_016049,NM_006263,NM_176783,NM_002818	chr14,chr14,chr14,chr14,chr14	+,-,+,+,-	RNF31,FAM158A,PSME1,PSME1,PSME2	5085,-360,-5830,-5830,4334
chr11:14382724-14384375	chr11	+	14382874	14384315	True	NM_000922,NM_001102669,NM_012250,NM_001177314,NM_001177315	chr11,chr11,chr11,chr11,chr11	+,-,-,-,-	PDE3B,RRAS2,RRAS2,RRAS2,RRAS2	280953,-2801,-2144,1788,-2843
chr17:32482939-32483178	chr17	+	32483004	32483134	True	NM_002982,NM_001094	chr17,chr17	+,-	CCL2,ACCN1	99161,741
chr1:162335594-162336714	chr1	+	162335693	162336579	True	NM_001126060,NM_182581	chr1,chr1	+,-	NOS1AP,C1orf111	-2971,10117
chr6:37791188-37791826	chr6	+	37791193	37791509	True	NM_153487,NM_021943	chr6,chr6	-,+	MDGA1,ZFAND3	-125427,-3937
chr17:1620617-1621502	chr17	+	1620660	1621366	True	NM_001163811,NR_028503,NR_028502,NR_028505,NR_028504,NM_001164407,NM_001163809,NM_001163673,NM_152348,NR_029494	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,-,-,-,+,+,+,-	WDR81,C17orf91,C17orf91,C17orf91,C17orf91,TLCD2,WDR81,WDR81,WDR81,MIR22	6467,-1094,-1094,-1094,-1094,-6998,6758,-894,-894,-3379
chrX:133947677-133948447	chrX	+	133947822	133948352	True	NM_001170757,NM_001170781,NM_001170782,NM_001170783,NM_001170779,NM_138819,NM_001170784	chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,+,+	FAM122B,FAM122C,FAM122C,FAM122C,FAM122C,FAM122C,FAM122C	-16560,-6651,-6669,-6651,-6651,-6651,-6669
chr1:207272771-207274595	chr1	+	207272794	207274071	True	NM_018566,NM_000715	chr1,chr1	-,+	YOD1,C4BPA	-48372,3535
chr12:133197666-133198061	chr12	+	133197705	133198105	True	NM_174872,NM_174873,NM_170683,NM_170682,NM_012226,NM_016318,NM_001195520	chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,+,+,+,+,-	P2RX2,P2RX2,P2RX2,P2RX2,P2RX2,P2RX2,LOC645277	-2353,-2353,-2353,-2353,-2353,-2353,-10668
chr14:81406914-81407956	chr14	+	81407295	81407972	True	NM_152446,NM_001018036	chr14,chr14	-,+	C14orf145,TSHR	-1411,13896
chr19:37023701-37024658	chr19	+	37023921	37024699	True	NM_001012756,NM_001166036,NM_001166037,NR_036504,NM_001166038	chr19,chr19,chr19,chr19,chr19	-,-,-,+,-	ZNF260,ZNF260,ZNF260,LOC728752,ZNF260	-4673,-4673,-4673,-43449,-4673
chr11:505395-505921	chr11	+	505394	505638	True	NM_002939,NM_198075,NM_203389,NM_203388,NM_203387,NM_203386,NM_203385,NM_203384,NM_203383	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,+,-,-,-,-,-,-,-	RNH1,LRRC56,RNH1,RNH1,RNH1,RNH1,RNH1,RNH1,RNH1	1233,31883,1685,1685,1685,1685,1233,1233,1233
chr1:183548205-183548581	chr1	+	183548352	183548551	True	NM_000433,NM_015149	chr1,chr1	-,+	NCF2,RGL1	11239,56656
chr15:79165557-79165803	chr15	+	79165556	79165850	True	NM_014272,NM_206839,NM_006791	chr15,chr15,chr15	-,+,+	ADAMTS7,MORF4L1,MORF4L1	-61783,-435,-435
chr19:7967411-7967723	chr19	+	7967552	7967768	True	NR_033250,NM_145185	chr19,chr19	-,+	LOC388499,MAP2K7	-22435,996
chr3:118714472-118715537	chr3	+	118714929	118715371	True	NM_152539,NM_001015887	chr3,chr3	+,-	C3orf30,IGSF11	149625,38363
chr3:32612459-32612679	chr3	+	32612495	32612711	True	NM_016141,NM_015442	chr3,chr3	-,+	DYNC1LI1,CNOT10	-129,113986
chr3:169901943-169902305	chr3	+	169902128	169902297	True	NM_002740,NM_024947	chr3,chr3	+,-	PRKCI,PHC3	37922,-2591
chr10:134351808-134352056	chr10	+	134351955	134352021	True	NM_005539,NM_173575	chr10,chr10	+,-	INPP5A,STK32C	-653,-230478
chr14:73393871-73394149	chr14	+	73393878	73394052	True	NM_181340,NM_181341,NM_015604,NM_012074,NM_001163508,NM_001163509	chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,-,+,+	DCAF4,DCAF4,DCAF4,DPF3,DCAF4,DCAF4	-889,-889,-889,-33069,-889,-889
chrX:72989001-72990030	chrX	+	72989073	72989917	True	NR_001564,NR_003255	chrX,chrX	-,+	XIST,TSIX	82721,22122
chr1:244812188-244812684	chr1	+	244812438	244812678	True	NM_001126,NM_016076	chr1,chr1	-,+	ADSS,PPPDE1	-197002,3673
chr12:2985220-2985583	chr12	+	2985268	2985608	True	NM_202003,NM_202002,NR_027365,NR_027363,NM_021953,NR_027364	chr12,chr12,chr12,chr12,chr12,chr12	-,-,+,+,-,+	FOXM1,FOXM1,C12orf32,C12orf32,FOXM1,C12orf32	745,745,756,756,745,756
chr20:42839932-42840783	chr20	+	42839986	42840796	True	NM_024034,NM_016470	chr20,chr20	+,-	GDAP1L1,C20orf111	35111,-555
chr13:108922541-108924397	chr13	+	108922730	108924357	True	NM_006573,NM_001145645,NM_001098268	chr13,chr13,chr13	+,+,-	TNFSF13B,TNFSF13B,LIG4	-804,-804,-52014
chr21:46021917-46022434	chr21	+	46021926	46022095	True	NM_198695,NM_198689,NM_198688	chr21,chr21,chr21	+,+,-	KRTAP10-8,KRTAP10-7,KRTAP10-6	9900,-1480,-9540
chr11:58297005-58297307	chr11	+	58297134	58297346	True	NM_001005218,NM_001197051	chr11,chr11	-,+	OR5B21,ZFP91	-21556,49240
chrX:54977318-54977665	chrX	+	54977432	54977664	True	NM_002625,NM_177556	chrX,chrX	-,+	PFKFB1,TRO	42897,-30234
chr15:40599738-40600277	chr15	+	40599847	40600298	True	NM_004573,NM_001145643	chr15,chr15	-,+	PLCB2,PHGR1	-60,42935
chr5:41057817-41058109	chr5	+	41057960	41058140	True	NM_000587,NM_173489	chr5,chr5	+,-	C7,HEATR7B2	-148420,13354
chr1:9601643-9602017	chr1	+	9601693	9601868	True	NR_027045,NM_032315	chr1,chr1	-,+	C1orf200,SLC25A33	112831,-2220
chr12:54939290-54940066	chr12	+	54939329	54939729	True	NM_006741,NM_000924	chr12,chr12	-,+	PPP1R1A,PDE1B	42764,3447
chr14:24868587-24869877	chr14	+	24868796	24869878	True	NM_001039771,NM_025081	chr14,chr14	-,+	CBLN3,NYNRIN	28904,-855
chr19:41934290-41934886	chr19	+	41934536	41934910	True	NM_198540,NM_001130514	chr19,chr19	-,+	B3GNT8,C19orf69	-9,14152
chr5:80528734-80529046	chr5	+	80528742	80529038	True	NM_001099736,NM_001099735,NM_001825,NR_034121	chr5,chr5,chr5,chr5	+,+,+,-	CKMT2,CKMT2,CKMT2,LOC100131067	100,100,100,68400
chr3:178289493-178290888	chr3	+	178289925	178290550	True	NM_022470,NM_005832	chr3,chr3	-,+	ZMAT3,KCNMB2	499163,-13358
chr22:37545243-37545443	chr22	+	37545242	37545442	True	NM_000878,NM_024681	chr22,chr22	-,+	IL2RB,KCTD17	570,-97514
chr13:52732305-52733176	chr13	+	52732489	52733090	True	NM_001146099,NM_152720,NR_027415,NM_002498,NM_021645	chr13,chr13,chr13,chr13,chr13	-,-,-,-,+	NEK3,NEK3,NEK3,NEK3,UTP14C	957,631,957,957,-133723
chr19:55985812-55987069	chr19	+	55985837	55986859	True	NM_024710,NM_020378,NM_033113	chr19,chr19,chr19	-,+,+	ISOC2,NAT14,ZNF628	-12788,9697,839
chr9:4117363-4117723	chr9	+	4117410	4117620	True	NR_026663,NM_152629	chr9,chr9	+,-	C9orf70,GLIS3	-218815,34615
chr3:57541774-57541991	chr3	+	57541792	57542022	True	NM_178504,NM_177966	chr3,chr3	-,+	DNAH12,PDE12	-11721,4
chr19:13049693-13050013	chr19	+	13049770	13050046	True	NM_004461,NM_005053,NM_004343	chr19,chr19,chr19	-,+,+	FARSA,RAD23A,CALR	-5212,6607,-407
chr11:64512775-64513003	chr11	+	64512775	64512967	True	NM_001098671,NM_001098670,NM_153378,NM_153819	chr11,chr11,chr11,chr11	-,-,+,-	RASGRP2,RASGRP2,SLC22A12,RASGRP2	-1145,-446,-154544,11
chr6:153312977-153314010	chr6	+	153313257	153314022	True	NM_001114184,NM_194435,NM_012177,NM_019041,NM_001142522	chr6,chr6,chr6,chr6,chr6	-,+,-,-,-	MTRF1L,VIP,FBXO5,MTRF1L,FBXO5	9954,-241377,-9054,9954,-8517
chr8:146128459-146129949	chr8	+	146128477	146129920	True	NM_001109689,NM_021061,NM_003416	chr8,chr8,chr8	-,-,+	ZNF250,ZNF250,ZNF7	-1631,-1631,-75625
chrX:107224841-107225318	chrX	+	107224889	107225333	True	NM_001170553,NM_031273	chrX,chrX	+,-	VSIG1,TEX13B	62866,317
chr22:38888784-38889303	chr22	+	38888806	38889116	True	NM_030881,NM_001098505,NM_006855	chr22,chr22,chr22	-,-,+	DDX17,DDX17,KDELR3	-4271,-4271,-24780
chr1:155558808-155559917	chr1	+	155559109	155559963	True	NM_018116,NM_018489	chr1,chr1	+,-	MSTO1,ASH1L	20043,-26785
chr1:155558808-155559917	chr1	+	155681468	155681518	False	NM_139118,NM_033657	chr1,chr1	-,+	YY1AP1,DAP3	-22645,-22634
chr19:41279677-41280363	chr19	+	41279826	41279954	True	NR_037791,NM_198476,NM_006533,NR_037775,NM_001202553,NM_016154	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+	RAB4B-EGLN2,C19orf54,MIA,MIA-RAB4B,MIA,RAB4B	4169,-23998,1327,1487,1127,4169
chr3:139655134-139656508	chr3	+	139655247	139656127	True	NM_022131,NM_178177	chr3,chr3	+,-	CLSTN2,NMNAT3	-1271,-258362
chr11:118017242-118018542	chr11	+	118017409	118018275	True	NR_024527,NM_001142349,NM_001142348,NM_019894,NM_174934	chr11,chr11,chr11,chr11,chr11	-,-,-,+,-	SCN4B,SCN4B,SCN4B,TMPRSS4,SCN4B	-1225,-1225,5405,-69735,5405
chr1:210189147-210189571	chr1	+	210189386	210189623	True	NR_027459,NM_006147	chr1,chr1	+,-	SYT14,IRF6	-77899,-209907
chr13:37633952-37634407	chr13	+	37634113	37634196	True	NM_017569,NM_001014286,NM_181503	chr13,chr13,chr13	-,-,+	FAM48A,FAM48A,EXOSC8	-263,-263,-59489
chr3:131731058-131732142	chr3	+	131731323	131731790	True	NM_001099,NM_130808	chr3,chr3	+,-	ACPP,CPNE4	304420,22111
chr3:169482337-169482568	chr3	+	169482377	169482565	True	NR_001566,NM_001185118,NR_033703,NR_033702,NM_018657,NM_032487,NM_001185119	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,+,+,+,-,+	TERC,MYNN,MYNN,MYNN,MYNN,ARPM1,MYNN	333,8287,8287,8287,8287,5168,9487
chr11:64576053-64577484	chr11	+	64576058	64577442	True	NM_004579,NM_006244,NM_130799,NM_000244,NM_130804,NM_130803,NM_130802,NM_130801,NM_130800	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,+,-,-,-,-,-,-,-	MAP4K2,PPP2R5B,MEN1,MEN1,MEN1,MEN1,MEN1,MEN1,MEN1	-5345,114700,796,796,1374,1374,821,643,643
chr21:30692089-30692595	chr21	+	30692159	30692595	True	NR_027655,NM_006585	chr21,chr21	+,-	BACH1,CCT8	-14657,-246149
chr16:89226476-89226700	chr16	+	89226560	89226736	True	NR_024347,NM_005187	chr16,chr16	+,-	C16orf81,CBFA2T3	-983,-183056
chr20:58634063-58635190	chr20	+	58634149	58635149	True	NM_173644,NM_006242	chr20,chr20	+,-	C20orf197,PPP1R3D	-3220,-118797
chr6:41515148-41515364	chr6	+	41515184	41515376	True	NM_001012426,NM_001012427,NM_007162,NM_138457	chr6,chr6,chr6,chr6	+,+,-,+	FOXP4,FOXP4,TFEB,FOXP4	-1071,-1071,187472,-1071
chr17:61522703-61523029	chr17	+	61522779	61522853	True	NM_001915,NM_001017916,NM_001017917,NM_000789	chr17,chr17,chr17,chr17	-,-,-,+	CYB561,CYB561,CYB561,ACE	921,744,-4572,31568
chr17:7308941-7309251	chr17	+	7309023	7309125	True	NM_152766,NR_037719,NM_020795	chr17,chr17,chr17	-,-,+	C17orf61,C17orf61-PLSCR3,NLGN2	-1573,-1573,2376
chr12:5603977-5604364	chr12	+	5604002	5604402	True	NM_020373,NM_002527	chr12,chr12	-,+	ANO2,NTF3	451046,-756
chr3:71804276-71804857	chr3	+	71804279	71804760	True	NM_173359,NM_001134649,NM_018971	chr3,chr3,chr3	-,-,+	EIF4E3,EIF4E3,GPR27	-355,-747,-1129
chr10:97889817-97890030	chr10	+	97889830	97890072	True	NM_014803,NR_036113	chr10,chr10	+,-	ZNF518A,MIR3157	-409,-65674
chr5:79866523-79867032	chr5	+	79866538	79866764	True	NM_205548,NM_001004441	chr5,chr5	+,-	FAM151B,ANKRD34B	-82789,-234
chr3:111392317-111392573	chr3	+	111392401	111392613	True	NM_001185106,NM_024508,NM_153268	chr3,chr3,chr3	+,-,+	PLCXD2,ZBED2,PLCXD2	909,-78235,909
chr15:63570560-63572155	chr15	+	63570641	63571929	True	NM_001218,NM_031301,NM_001145646	chr15,chr15,chr15	-,+,+	CA12,APH1B,APH1B	102205,-943,-943
chr17:3186816-3187511	chr17	+	3186837	3187231	True	NM_002551,NM_002550,NR_024128	chr17,chr17,chr17	-,-,+	OR3A2,OR3A1,OR3A4	-4569,8695,26307
chr19:55107475-55107688	chr19	+	55107546	55107696	True	NM_006863,NM_145057	chr19,chr19	+,-	LILRA1,CDC42EP5	-2484,-123124
chr2:160567012-160568684	chr2	+	160567187	160568594	True	NM_001198763,NM_022826	chr2,chr2	-,+	CD302,MARCH7	86223,415
chr20:24970795-24971768	chr20	+	24971000	24971780	True	NM_003650,NM_020531	chr20,chr20	+,-	CST7,C20orf3	-41198,1695
chr12:31229426-31230501	chr12	+	31229433	31230451	True	NM_004399,NM_001135811,NM_030653,NM_152438	chr12,chr12,chr12,chr12	+,-,+,+	DDX11,FAM60A,DDX11,DDX11	-2705,248720,-2705,-2705
chr1:42628620-42629352	chr1	+	42628630	42629158	True	NM_007102,NM_033553	chr1,chr1	+,-	GUCA2B,GUCA2A	-9589,1287
chr4:78429083-78430478	chr4	+	78429093	78430522	True	NM_144571,NM_006419	chr4,chr4	-,+	CNOT6L,CXCL13	310079,2384
chr18:24219332-24220206	chr18	+	24219347	24220115	True	NM_198991,NR_026908	chr18,chr18	-,+	KCTD1,C18orf16	244,225156
chr19:13860111-13860537	chr19	+	13860226	13860442	True	NR_036515,NM_030818	chr19,chr19	-,+	LOC284454,CCDC130	86719,-1538
chr4:39481484-39481686	chr4	+	39481483	39481667	True	NR_026854,NM_000661	chr4,chr4	+,-	LOC401127,RPL9	207,-20915
chr12:48396397-48396599	chr12	+	48396412	48396592	True	NM_024056,NM_033150,NM_001844	chr12,chr12,chr12	+,-,-	TMEM106C,COL2A1,COL2A1	-39133,1743,1743
chr1:89457820-89458049	chr1	+	89457960	89458060	True	NM_019610,NM_001008662,NM_001008661,NM_001162536,NM_006256	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	RBMXL1,CCBL2,CCBL2,RBMXL1,PKN2	633,633,633,633,-308096
chr17:8272247-8272467	chr17	+	8272308	8272506	True	NM_213597,NM_153007,NR_024447	chr17,chr17,chr17	-,+,-	KRBA2,ODF4,LOC100128288	2402,-29171,-8449
chr6:43613331-43613782	chr6	+	43613356	43613616	True	NM_014628,NM_152732,NM_019096,NM_001193341	chr6,chr6,chr6,chr6	+,+,-,+	MAD2L1BP,RSPH9,GTPBP2,RSPH9	-9830,-640,-16420,-640
chr15:43508183-43508574	chr15	+	43508247	43508547	True	NM_000119,NM_001114134,NM_037370	chr15,chr15,chr15	-,-,+	EPB42,EPB42,CCNDBP1	4826,4826,-30161
chr20:4618615-4619887	chr20	+	4618842	4619647	True	NR_024267,NM_000311	chr20,chr20	-,+	PRNT,PRNP	101724,47149
chr22:25028632-25029205	chr22	+	25028745	25028907	True	NR_024593,NR_024494	chr22,chr22	-,+	POM121L10P,BCRP3	26257,-10
chr22:25028632-25029205	chr22	-	24641132	24641279	False	NM_001099782,NM_001099781,NM_004121,NR_003714	chr22,chr22,chr22,chr22	-,-,-,+	GGT5,GGT5,GGT5,POM121L9P	-22,-22,-22,6309
chr15:52403124-52403457	chr15	+	52403126	52403251	True	NM_002748,NM_020396	chr15,chr15	+,-	MAPK6,BCL2L10	-91766,1774
chr2:102838966-102840391	chr2	+	102839062	102840386	True	NM_003854,NM_032718	chr2,chr2	+,-	IL1RL2,MFSD9	-35687,513001
chr6:94128876-94129275	chr6	+	94128924	94129308	True	NR_015362,NM_004440	chr6,chr6	+,-	TSG1,EPHA7	287492,42
chr5:173138422-173139467	chr5	+	173138551	173139347	True	NR_027109,NM_138369	chr5,chr5	+,-	LOC285593,BOD1	-131945,-94885
chr7:2285510-2285760	chr7	+	2285582	2285744	True	NM_198954,NM_002452,NM_198952,NM_198950,NM_013393,NM_198948,NM_198949,NM_198953	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,-,+,+,+	NUDT1,NUDT1,NUDT1,NUDT1,FTSJ2,NUDT1,NUDT1,NUDT1	-3093,-3776,-3737,-3737,-3749,-3776,-3776,-3093
chr18:21722138-21723774	chr18	+	21722375	21723833	True	NM_012189,NM_138643,NM_018030,NM_138644,NM_153770,NM_153769,NM_153768	chr18,chr18,chr18,chr18,chr18,chr18,chr18	+,+,-,+,+,+,+	CABYR,CABYR,OSBPL1A,CABYR,CABYR,CABYR,CABYR	-3471,-3471,128423,-2978,-3471,-3471,-3471
chr2:234183910-234184357	chr2	+	234184073	234184393	True	NR_003008,NM_018218	chr2,chr2	+,-	SCARNA5,USP40	-22,289893
chr4:56263327-56264059	chr4	+	56263373	56263761	True	NM_018475,NR_037969	chr4,chr4	+,-	TMEM165,LOC100506462	-1334,-11626
chr4:113558642-113559398	chr4	+	113558648	113559076	True	NM_018392,NM_015454,NM_016648	chr4,chr4,chr4	-,+,+	C4orf21,LARP7,LARP7	-497,-87,-579
chr7:76089190-76089399	chr7	+	76089223	76089440	True	NM_020892,NR_003262,NM_001102594,NM_001102595	chr7,chr7,chr7,chr7	+,-,+,+	DTX2,FDPSL2A,DTX2,DTX2	1531,14932,1531,1531
chr7:76089190-76089399	chr7	+	76587331	76587548	False	NR_023383,NM_006682	chr7,chr7	+,-	PMS2P11,FGL2	22590,241657
chr13:98829378-98829648	chr13	+	98829403	98829627	True	NM_178861,NR_036129	chr13,chr13	-,+	RNF113B,MIR3170	12,31150
chr9:35860524-35861183	chr9	+	35860537	35861111	True	NM_001004487,NR_024006	chr9,chr9	-,+	OR13J1,LOC92973	9337,-317
chr22:39639149-39639365	chr22	+	39639176	39639412	True	NM_145731,NM_002608,NM_033016	chr22,chr22,chr22	+,-,-	SYNGR1,PDGFB,PDGFB	106541,1595,-2262
chr19:3065377-3065891	chr19	+	3065676	3065922	True	NM_002067,NM_198970,NM_198969,NM_001130	chr19,chr19,chr19,chr19	+,-,-,-	GNA11,AES,AES,AES	28485,-3305,-2712,-3305
chr13:53223267-53224921	chr13	+	53223421	53224941	True	NM_006704,NM_001011705,NM_001130912	chr13,chr13,chr13	+,-,+	SUGT1,LECT1,SUGT1	1889,89056,1889
chr1:93296512-93297652	chr1	+	93296535	93297580	True	NR_000006,NR_002444,NM_000969,NM_005665	chr1,chr1,chr1,chr1	+,+,+,-	SNORD21,SNORA66,RPL5,EVI5	5265,8695,13,-38574
chr7:45924812-45926193	chr7	+	45925005	45926215	True	NM_000596,NM_000598	chr7,chr7	+,-	IGFBP1,IGFBP3	1743,34706
chr4:141347075-141348052	chr4	+	141347166	141348042	True	NM_004362,NM_001153663,NM_001130675	chr4,chr4,chr4	-,+,-	CLGN,SCOC,CLGN	823,-52553,823
chr2:211499076-211499960	chr2	+	211499228	211500008	True	NM_001136575,NR_002763	chr2,chr2	-,+	LANCL1,CPS1-IT1	-157729,-16984
chr1:234512010-234513164	chr1	+	234512037	234512671	True	NM_001012985,NM_005646	chr1,chr1	+,-	C1orf31,TARBP1	-2666,102228
chr7:194007-194416	chr7	+	194051	194387	True	NM_002607,NM_020223	chr7,chr7	-,+	PDGFA,FAM20C	365144,-1133
chr2:33170788-33171328	chr2	+	33170796	33171373	True	NM_206943,NM_015475	chr2,chr2	+,-	LTBP1,FAM98A	995,653039
chr15:72772503-72773196	chr15	+	72772546	72772609	True	NM_000520,NM_005744	chr15,chr15	-,+	HEXA,ARIH1	-104026,-5937
chr22:38852332-38852976	chr22	+	38852420	38853018	True	NM_016657,NM_152868	chr22,chr22	+,-	KDELR3,KCNJ4	11064,-1217
chr2:69004483-69005921	chr2	+	69004508	69005869	True	NM_014482,NM_001166276,NM_014882	chr2,chr2,chr2	-,+,+	BMP10,ARHGAP25,ARHGAP25	92834,-2638,-2638
chr6:15017373-15017650	chr6	+	15017373	15017687	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	228839,645652
chr9:99183674-99183922	chr9	+	99183674	99183778	True	NM_153695,NM_014282	chr9,chr9	-,+	ZNF367,HABP4	-3005,28635
chr1:161674144-161675212	chr1	+	161674362	161675077	True	NM_001184866,NM_001184867,NM_001184873,NM_001184872,NM_032738,NM_001184870,NM_001184871,NR_002595	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,+,+,-	FCRLA,FCRLA,FCRLA,FCRLA,FCRLA,FCRLA,FCRLA,RPL31P11	1684,1684,1684,1684,1684,1684,1684,-19320
chr6:4855655-4856592	chr6	+	4855737	4856623	True	NM_001143970,NM_006638	chr6,chr6	+,-	CDYL,RPP40	-19456,147698
chr3:108310697-108312614	chr3	+	108310843	108312475	True	NM_020890,NM_014648	chr3,chr3	-,+	KIAA1524,DZIP3	-2352,-2557
chr1:150948192-150949222	chr1	+	150948537	150948696	True	NM_003568,NM_022075,NM_181746	chr1,chr1,chr1	+,-,-	ANXA9,LASS2,LASS2	5802,-1097,-1097
chr7:30950237-30950977	chr7	+	30950464	30950760	True	NM_001202481,NM_198098	chr7,chr7	-,+	CRHR2,AQP1	-210745,654
chr13:61985941-61987573	chr13	+	61985947	61987501	True	NM_022843,NM_001146070	chr13,chr13	-,+	PCDH20,TDRD3	2204,-1014572
chr20:3217311-3218599	chr20	+	3217648	3218538	True	NM_001174090,NM_001174089,NM_032034,NM_181493	chr20,chr20,chr20,chr20	-,-,-,+	SLC4A11,SLC4A11,SLC4A11,ITPA	347,1399,51,-27643
chr22:38036228-38036448	chr22	+	38036359	38036487	True	NM_006498,NM_018957	chr22,chr22	-,+	LGALS2,SH3BP1	-60335,-726
chr5:70377082-70377684	chr5	+	70377251	70377624	True	NM_022877,NR_026578	chr5,chr5	+,-	SMN2,LOC647859	-156544,11328
chr5:70377082-70377684	chr5	-	68841925	68842298	False	NR_027439,NM_001098728	chr5,chr5	-,+	LOC100272216,GTF2H2C	86790,13752
chr19:36909911-36910434	chr19	+	36910053	36910308	True	NM_133466,NR_033748	chr19,chr19	-,+	ZFP82,LOC644189	-503,2130
chr20:61568138-61568717	chr20	+	61568318	61568636	True	NM_033081,NM_017896,NM_022105,NM_080797	chr20,chr20,chr20,chr20	-,+,-,-	DIDO1,C20orf11,DIDO1,DIDO1	718,804,718,718
chr14:35591936-35592236	chr14	+	35592093	35592289	True	NM_017917,NM_014672	chr14,chr14	-,+	PPP2R3C,KIAA0391	-574,-368
chr1:9295436-9295791	chr1	+	9295464	9295628	True	NM_004285,NR_029610	chr1,chr1	+,-	H6PD,MIR34A	-652,-83628
chr2:133035065-133036007	chr2	+	133035107	133036056	True	NM_001508,NR_027020	chr2,chr2	+,-	GPR39,ANKRD30BL	138090,-19565
chr17:56085328-56085561	chr17	+	56085358	56085577	True	NR_034041,NM_001078166,NM_006924,NM_080677	chr17,chr17,chr17,chr17	-,-,-,+	SRSF1,SRSF1,SRSF1,DYNLL2	-651,-651,-651,75202
chr18:13821174-13821854	chr18	+	13821364	13821720	True	NM_005913,NM_000529	chr18,chr18	+,-	MC5R,MC2R	3822,93871
chr2:239198062-239198510	chr2	+	239198094	239198502	True	NM_001139490,NM_022817	chr2,chr2	+,-	TRAF3IP1,PER2	30682,-887
chr11:58316721-58317827	chr11	+	58317115	58317867	True	NM_004811,NM_001197051	chr11,chr11	-,+	LPXN,ZFP91	25573,28719
chr12:9802176-9803261	chr12	+	9802180	9802987	True	NM_002258,NR_002814	chr12,chr12	-,+	KLRB1,LOC374443	-41683,-1588
chr15:75170605-75170991	chr15	+	75170698	75170992	True	NM_005697,NM_002435	chr15,chr15	-,+	SCAMP2,MPI	-5028,11417
chr12:48298857-48299245	chr12	+	48298952	48299100	True	NM_001143841,NM_000376,NM_001017536,NM_001017535	chr12,chr12,chr12,chr12	+,-,-,-	TMEM106C,VDR,VDR,VDR	58229,-138,-138,-138
chr6:160182948-160183182	chr6	+	160183063	160183217	True	NR_037166,NM_005891	chr6,chr6	-,+	LOC100129518,ACAT2	197,-125
chr7:98741969-98742396	chr7	+	98742115	98742281	True	NM_020429,NM_001199847,NR_002147,NM_181349	chr7,chr7,chr7,chr7	-,-,+,-	SMURF1,SMURF1,MYH16,SMURF1	-372,-372,128642,-372
chr16:87966701-87968028	chr16	+	87966712	87967832	True	NM_001173539,NM_001739	chr16,chr16	+,-	BANP,CA5A	17205,2330
chr2:114441864-114442093	chr2	+	114442049	114442113	True	NR_024531,NM_013412	chr2,chr2	-,+	RPL23AP7,RABL2A	-57334,-57291
chrX:15621989-15622513	chrX	+	15622036	15622562	True	NR_026551,NM_021804	chrX,chrX	+,-	CA5BP1,ACE2	70476,-1844
chr22:21387966-21388573	chr22	+	21388035	21388409	True	NM_004173,NR_027006	chr22,chr22	-,+	SLC7A4,LOC400891	-1188,11839
chr10:71814983-71816193	chr10	+	71815048	71815969	True	NM_018649,NM_001198696	chr10,chr10	+,-	H2AFY2,AIFM2	-2752,76780
chr21:46011247-46011494	chr21	+	46011247	46011465	True	NM_198689,NM_198688	chr21,chr21	+,-	KRTAP10-7,KRTAP10-6	9031,971
chr21:46011247-46011494	chr21	-	46057892	46058110	False	NM_198698,NM_181688,NM_198692	chr21,chr21,chr21	-,+,+	KRTAP12-4,KRTAP10-10,KRTAP10-11	16516,-670,8220
chr1:168264033-168264250	chr1	+	168264066	168264233	True	NR_026844,NM_005149	chr1,chr1	-,+	ANKRD36BP1,TBX19	-47398,-13839
chr5:140868989-140869284	chr5	+	140868996	140869324	True	NM_032406,NM_032407,NM_018929,NM_018928,NM_001079812	chr5,chr5,chr5,chr5,chr5	+,+,+,+,-	PCDHGC4,PCDHGC5,PCDHGC5,PCDHGC4,DIAPH1	-4306,-239,-239,-4306,129348
chr19:17582061-17582414	chr19	+	17582142	17582412	True	NM_198580,NM_138454	chr19,chr19	+,-	SLC27A1,NXNL1	-893,-10417
chr4:41210572-41212173	chr4	+	41210634	41211780	True	NM_173075,NM_001166050,NM_004307,NM_004181	chr4,chr4,chr4,chr4	-,-,-,+	APBB2,APBB2,APBB2,UCHL1	4913,4913,4913,47117
chr3:122205592-122207081	chr3	+	122205813	122207017	True	NM_002264,NM_138287	chr3,chr3	-,+	KPNA1,DTX3L	26819,76167
chr8:62226528-62228459	chr8	+	62226540	62228072	True	NR_034003,NM_173519	chr8,chr8	-,+	LOC100130298,CLVS1	-346233,-26067
chr5:147111721-147113199	chr5	+	147111986	147112981	True	NM_014790,NM_054023	chr5,chr5	-,+	JAKMIP2,SCGB3A2	49322,145292
chr12:62584452-62584855	chr12	+	62584476	62584748	True	NM_178539,NM_006313	chr12,chr12	-,+	FAM19A2,USP15	1853,69438
chr1:154965417-154966091	chr1	+	154965452	154966078	True	NM_025207,NM_003029,NM_018655,NM_001184892,NM_001184891,NM_015872,NM_201398	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,-,+,+,+,+,+	FLAD1,SHC1,LENEP,FLAD1,FLAD1,ZBTB7B,FLAD1	-9733,-18493,-17,-9733,-9733,9033,-9733
chr7:4921977-4922683	chr7	+	4922230	4922716	True	NM_018059,NR_015449	chr7,chr7	-,+	RADIL,RNF216L	669,90899
chr1:29447422-29447651	chr1	+	29447467	29447619	True	NM_001003682,NM_001195001,NM_001171868	chr1,chr1,chr1	-,+,-	TMEM200B,PTPRU,TMEM200B	2852,115408,1444
chr15:72947280-72947525	chr15	+	72947331	72947399	True	NR_002780,NM_018652	chr15,chr15	-,+	HIGD2B,GOLGA6B	31141,-344
chr15:72947280-72947525	chr15	-	74374529	74374597	False	NM_001130136,NM_001038640	chr15,chr15	+,-	ISLR2,GOLGA6A	47117,344
chr15:72947280-72947525	chr15	+	75551192	75551260	False	NR_030360,NM_001164404	chr15,chr15	-,+	MIR631,GOLGA6C	94816,-344
chr15:72947280-72947525	chr15	+	75575469	75575537	False	NR_030360,NM_001145224	chr15,chr15	-,+	MIR631,GOLGA6D	70539,-338
chr17:71825995-71826273	chr17	+	71826005	71826291	True	NM_000999,NR_027146	chr17,chr17	+,-	RPL38,C17orf54	373503,-1329
chr1:6544551-6544818	chr1	+	6544756	6544822	True	NM_001042665,NM_001042664,NM_020631,NM_031475	chr1,chr1,chr1,chr1	-,-,-,+	PLEKHG5,PLEKHG5,PLEKHG5,ESPN	1242,5868,6988,-59959
chr10:135154621-135155011	chr10	+	135154622	135154813	True	NM_001145201,NM_015722,NM_145202	chr10,chr10,chr10	+,-,+	PRAP1,CALY,PRAP1	6030,-4147,6030
chr19:2308364-2308894	chr19	+	2308397	2308689	True	NM_001101391,NM_001077238	chr19,chr19	-,+	LINGO3,SPPL2B	-241,19939
chr2:157296213-157297520	chr2	+	157296498	157297404	True	NM_006186,NM_001083112,NM_000408	chr2,chr2,chr2	-,+,+	NR4A2,GPD2,GPD2	-107211,-4590,-3655
chr5:149111978-149112197	chr5	+	149112021	149112237	True	NM_001172698,NM_001892,NM_133263	chr5,chr5,chr5	+,-,+	PPARGC1B,CSNK1A1,PPARGC1B	-2257,-181014,-2257
chr22:21213461-21213666	chr22	+	21213510	21213714	True	NM_004782,NM_058004	chr22,chr22	+,-	SNAP29,PI4KA	-269,-440
chr13:21715167-21716993	chr13	+	21715171	21717031	True	NM_001166017,NM_005870	chr13,chr13	-,+	SKA3,SAP18	33760,-570
chr7:134671686-134673682	chr7	+	134671754	134673133	True	NM_178563,NM_024033	chr7,chr7	+,-	AGBL3,C7orf49	-546,182457
chr19:10945450-10945772	chr19	+	10945468	10945770	True	NM_001136482,NM_006858	chr19,chr19	+,-	C19orf38,TMED1	13335,1263
chr11:68040269-68040503	chr11	+	68040434	68040552	True	NM_022338,NM_002335	chr11,chr11	-,+	C11orf24,LRP5	-965,39555
chr11:72929617-72929867	chr11	+	72929622	72929848	True	NM_014824,NM_002564,NM_176071,NM_176072	chr11,chr11,chr11,chr11	-,+,+,+	FCHSD2,P2RY2,P2RY2,P2RY2	-76479,-329,-171,-329
chr4:106831469-106833253	chr4	+	106831516	106833293	True	NM_020395,NM_001184693	chr4,chr4	-,+	INTS12,NPNT	-201635,-14983
chr7:74303869-74304338	chr7	+	74303869	74304157	True	NR_027777,NR_027776,NM_001025202,NR_027775	chr7,chr7,chr7,chr7	+,+,-,+	PMS2P5,PMS2P5,STAG3L2,PMS2P5	2736,2736,2627,2736
chr7:74303869-74304338	chr7	+	72473609	72473897	False	NM_001013739,NR_003614	chr7,chr7	-,+	STAG3L3,PMS2L2	2611,2782
chr7:74303869-74304338	chr7	-	74991004	74991292	False	NR_003614,NM_001002840,NM_018991	chr7,chr7,chr7	-,+,+	PMS2L2,STAG3L1,STAG3L1	-2789,-2611,-2611
chr12:122356847-122358393	chr12	+	122356853	122357763	True	NM_001178003,NM_144668,NM_001171993	chr12,chr12,chr12	+,+,-	WDR66,WDR66,HPD	-441,-424,-30336
chr11:36531059-36531852	chr11	+	36531087	36531766	True	NM_145803,NM_000448,NM_004620	chr11,chr11,chr11	-,+,-	TRAF6,RAG1,TRAF6	106,57796,106
chr6:108616943-108618552	chr6	+	108617027	108618290	True	NM_145315,NM_152827	chr6,chr6	+,-	LACE1,SNX3	-987,-34563
chr17:3537788-3538320	chr17	+	3537883	3538175	True	NM_004937,NM_001031681,NM_013276	chr17,chr17,chr17	+,+,-	CTNS,CTNS,SHPK	1586,1586,1491
chr19:11641248-11641862	chr19	+	11641321	11641655	True	NM_001142464,NM_001142465,NM_016581,NR_024551,NM_001299	chr19,chr19,chr19,chr19,chr19	-,-,-,-,+	ECSIT,ECSIT,ECSIT,ECSIT,CNN1	-1334,-1334,-1334,-1641,7923
chr22:50779675-50780143	chr22	+	50779684	50780118	True	NM_001001794,NM_014678	chr22,chr22	-,+	FAM116B,PPP6R2	-14195,1641
chr11:71159161-71159458	chr11	+	71159300	71159506	True	NM_018161,NM_001360,NM_001163817	chr11,chr11,chr11	+,-,-	NADSYN1,DHCR7,DHCR7	4710,21,21
chr3:48721260-48721568	chr3	+	48721264	48721562	True	NM_016453,NM_033629,NM_184231	chr3,chr3,chr3	-,+,-	NCKIPSD,TREX1,NCKIPSD	1822,-214086,1822
chr17:73634415-73634727	chr17	+	73634605	73634673	True	NR_028439,NM_001162997,NM_001162995,NM_004259	chr17,chr17,chr17,chr17	+,+,+,-	LOC643008,LOC100130933,LOC643008,RECQL5	-1981,7972,-5142,28642
chr12:129310779-129311276	chr12	+	129310808	129310933	True	NM_145648,NM_144669	chr12,chr12	-,+	SLC15A4,GLT1D1	-2267,27147
chr10:95454075-95454507	chr10	+	95454115	95454553	True	NM_005097,NM_145246	chr10,chr10	+,-	LGI1,FRA10AC1	63012,7826
chr19:49518412-49519486	chr19	+	49518476	49519180	True	NM_000894,NM_000737,NM_033378	chr19,chr19,chr19	-,-,+	LHB,CGB,CGB2	1217,8463,15949
chr22:20253932-20254909	chr22	+	20254124	20254800	True	NM_023004,NR_026919	chr22,chr22	-,+	RTN4R,LOC150197	1066,-60320
chr22:20253932-20254909	chr22	-	18959361	18959411	False	NR_002733,NM_016335	chr22,chr22	+,-	DGCR5,PRODH	-1385,-35295
chr1:225117748-225118390	chr1	+	225117758	225118184	True	NM_144989,NM_001145154,NM_025160,NM_001373	chr1,chr1,chr1,chr1	+,+,-,+	DNAH14,DNAH14,WDR26,DNAH14	-446,-453,-495757,-453
chr5:131893021-131893340	chr5	+	131893025	131893345	True	NM_005732,NM_000879	chr5,chr5	+,-	RAD50,IL5	-460,-13811
chr9:91150240-91150456	chr9	+	91150314	91150504	True	NM_001161625,NM_145283,NM_001100111	chr9,chr9,chr9	+,+,-	NXNL2,NXNL2,LOC286238	-349,-349,116621
chr12:16058431-16059588	chr12	+	16058545	16059609	True	NM_004447,NM_015954	chr12,chr12	-,+	EPS8,DERA	-116035,4576
chr12:7024653-7025019	chr12	+	7024814	7025046	True	NM_032641,NM_001007026,NM_001975	chr12,chr12,chr12	-,+,+	SPSB2,ATN1,ENO2	-42293,8579,-1251
chr16:84220014-84220287	chr16	+	84220179	84220249	True	NM_139174,NM_139353,NM_005679,NM_001145400	chr16,chr16,chr16,chr16	+,-,-,+	ADAD2,TAF1C,TAF1C,ADAD2	4473,463,463,4473
chr4:153866980-153867821	chr4	+	153867081	153867791	True	NM_033393,NM_145720	chr4,chr4	+,-	FHDC1,TIGD4	-3006,-166165
chr2:96258412-96258735	chr2	+	96258446	96258645	True	NM_001164464,NM_138800	chr2,chr2	-,+	TRIM43B,TRIM43	-107967,-731
chr2:96258412-96258735	chr2	-	97698495	97698696	False	NM_001122646,NM_001164315	chr2,chr2	-,+	FAM178B,ANKRD36	-46194,80536
chr7:142748533-142749841	chr7	+	142748561	142749748	True	NR_002140,NM_001001667	chr7,chr7	-,+	OR6W1P,OR6V1	11184,-37
chr22:35556051-35557109	chr22	+	35556135	35556914	True	NM_001008494,NM_005368	chr22,chr22	+,-	ISX,MB	-94064,456531
chr1:152281464-152282655	chr1	+	152281501	152282687	True	NM_002016,NM_178438	chr1,chr1	-,+	FLG,LCE5A	15042,200632
chr7:94024549-94024891	chr7	+	94024620	94024893	True	NM_001099400,NM_000089	chr7,chr7	-,+	SGCE,COL1A2	260679,-798
chr20:48733400-48734099	chr20	+	48733547	48734055	True	NM_021988,NM_001032288,NM_022442,NM_005194,NM_199144	chr20,chr20,chr20,chr20,chr20	-,-,-,+,-	UBE2V1,UBE2V1,UBE2V1,CEBPB,UBE2V1	-1053,-3837,-1056,73320,-1053
chr15:81489539-81490335	chr15	+	81489575	81490168	True	NM_001172128,NM_181900	chr15,chr15	+,-	IL16,STARD5	-407,126406
chr20:3683943-3684165	chr20	+	3683974	3684070	True	NM_001197327,NM_023068	chr20,chr20	+,-	HSPA12B,SIGLEC1	29246,3755
chr16:28304626-28304844	chr16	+	28304724	28304786	True	NM_001024401,NM_015171	chr16,chr16	+,-	SBK1,XPO6	-935,-81534
chr1:27706778-27707697	chr1	+	27706795	27707625	True	NM_207397,NM_005281,NM_003665,NM_173452	chr1,chr1,chr1,chr1	-,+,-,-	CD164L2,GPR3,FCN3,FCN3	2230,11526,-5480,-5480
chr18:25756423-25756731	chr18	+	25756451	25756533	True	NR_026908,NM_001792	chr18,chr18	+,-	C18orf16,CDH2	-1311230,962
chr7:1016085-1016539	chr7	+	1016105	1016221	True	NM_001031617,NM_017781	chr7,chr7	-,+	COX19,CYP2W1	-870,6613
chr12:57635056-57635304	chr12	+	57635067	57635145	True	NM_145064,NM_020142,NM_001166357	chr12,chr12,chr12	-,-,+	STAC3,NDUFA4L2,SHMT2	9874,-592,-10975
chr19:53447687-53447980	chr19	+	53447919	53447991	True	NM_152473,NR_037805	chr19,chr19	+,-	HERV-V1,ZNF321	69352,-2072
chr11:65228036-65229746	chr11	+	65228126	65229390	True	NR_030343,NM_182556	chr11,chr11	+,-	MIR612,SLC25A45	-16255,-77984
chr5:150079837-150080224	chr5	+	150079855	150080028	True	NM_018047,NM_133371	chr5,chr5	-,+	RBM22,MYOZ3	692,-39502
chr16:29821027-29821958	chr16	+	29821160	29821749	True	NM_017458,NM_024516,NM_005115,NM_006319,NM_145239,NM_001042539,NM_002383	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,-,+,+,+	MVP,C16orf53,MVP,CDIPT,PRRT2,MAZ,MAZ	9965,5778,9965,52880,1659,-3356,-3356
chr2:88745196-88747116	chr2	+	88745208	88746847	True	NM_152670,NM_001135649	chr2,chr2	+,-	C2orf51,FOXI3	77321,5257
chr6:29893603-29893824	chr6	+	29893653	29893731	True	NR_001317,NM_002116	chr6,chr6	-,+	HCG4P6,HLA-A	-225,16577
chr16:29988575-29989107	chr16	+	29988574	29989058	True	NM_004783,NM_016151,NM_003609	chr16,chr16,chr16	+,+,-	TAOK2,TAOK2,HIRIP3	-3403,-3403,18404
chr19:34894919-34895151	chr19	+	34895065	34895132	True	NR_027620,NM_032346	chr19,chr19	-,+	LOC643719,PDCD2L	173515,170
chr20:45947548-45947784	chr20	+	45947558	45947790	True	NR_024594,NM_012408	chr20,chr20	+,-	LOC100131496,ZMYND8	-363,37734
chr3:50647696-50647992	chr3	+	50647737	50647949	True	NM_013324,NM_145071,NM_004635	chr3,chr3,chr3	-,-,+	CISH,CISH,MAPKAPK3	1363,1363,6651
chr5:126114013-126114226	chr5	+	126114119	126114193	True	NM_005573,NM_001198557,NM_001202404	chr5,chr5,chr5	+,+,-	LMNB1,LMNB1,ALDH7A1	-1855,-1325,-183037
chr17:7199218-7199621	chr17	+	7199252	7199616	True	NM_001143760,NM_015982	chr17,chr17	+,-	EIF5A,YBX2	10701,-1376
chr3:58201510-58201966	chr3	+	58201614	58201808	True	NM_020676,NM_004944	chr3,chr3	+,-	ABHD6,DNASE1L3	21450,-1216
chr16:5113418-5113982	chr16	+	5113510	5113815	True	NM_001098514,NM_152459,NM_019109	chr16,chr16,chr16	-,-,+	C16orf89,C16orf89,ALG1	2357,2357,7994
chr5:178487975-178488251	chr5	+	178487990	178488090	True	NM_014594,NM_000843	chr5,chr5	+,-	ZNF354C,GRM6	-434,-65866
chr16:89987728-89987993	chr16	+	89987759	89987985	True	NM_002386,NM_145039,NM_001197181,NM_006086	chr16,chr16,chr16,chr16	+,-,+,+	MC1R,CENPBD1,TUBB3,TUBB3	-3523,51305,431,1701
chr2:11295579-11295822	chr2	+	11295591	11295769	True	NM_152391,NM_004850	chr2,chr2	+,-	PQLC3,ROCK2	-102,188992
chr6:26538979-26539656	chr6	+	26539038	26539493	True	NM_006353,NM_024639	chr6,chr6	+,-	HMGN4,ZNF322A	-517,120521
chr14:103799530-103800027	chr14	+	103799550	103800058	True	NM_183004,NR_002964,NR_033938,NM_001969	chr14,chr14,chr14,chr14	+,+,-,+	EIF5,SNORA28,LOC100131366,EIF5	1177,4127,-144185,434
chr12:128086117-128086441	chr12	+	128086252	128086460	True	NR_033970,NR_033987	chr12,chr12	-,+	LOC440117,FLJ37505	-727016,279701
chr19:9296819-9297685	chr19	+	9296887	9297582	True	NM_175883,NM_001005191	chr19,chr19	+,-	OR7D2,OR7D4	-668,28022
chr6:88183179-88183543	chr6	+	88183247	88183553	True	NM_006416,NM_020320,NM_001168398	chr6,chr6,chr6	+,-,+	SLC35A1,RARS2,SLC35A1	-657,116232,-657
chr8:108508353-108509557	chr8	+	108508352	108509603	True	NM_001198535,NM_001199859,NM_001146	chr8,chr8,chr8	+,-,-	OXR1,ANGPT1,ANGPT1	-770075,701,701
chr20:9496678-9496890	chr20	+	9496716	9496800	True	NM_012261,NM_001199897,NM_020341	chr20,chr20,chr20	+,+,-	C20orf103,C20orf103,PAK7	-1762,-1762,322937
chr17:15603558-15604306	chr17	+	15603677	15604307	True	NM_006470,NM_001130842,NM_020652	chr17,chr17,chr17	-,+,+	TRIM16,ZNF286A,ZNF286A	-17484,-837,-837
chr17:15603558-15604306	chr17	-	18584300	18584930	False	NM_001145045,NM_001037330,NR_026718	chr17,chr17,chr17	-,+,-	ZNF286B,TRIM16L,FOXO3B	692,40471,-7806
chr3:46037506-46039288	chr3	+	46037517	46038939	True	NM_024513,NM_006564	chr3,chr3	-,+	FYCO1,CXCR6	-210,-52595
chr20:31642844-31643724	chr20	+	31642883	31643723	True	NM_182658,NM_080675	chr20,chr20	+,-	C20orf185,SUN5	146,-50644
chr19:45408432-45409095	chr19	+	45408715	45409063	True	NM_145288,NM_001645,NM_000041	chr19,chr19,chr19	-,+,+	ZNF296,APOC1,APOE	170675,8857,-25
chr1:46688312-46688681	chr1	+	46688316	46688567	True	NM_001013615,NR_024332	chr1,chr1	+,-	C1orf190,POMGNT1	-19361,-2339
chr1:154581250-154583006	chr1	+	154581357	154582994	True	NM_015841,NM_015840,NM_001193495,NM_000748,NM_001111	chr1,chr1,chr1,chr1,chr1	-,-,-,+,-	ADAR,ADAR,ADAR,CHRNB2,ADAR	-633,-633,-2581,-41152,-633
chr1:1169432-1169641	chr1	+	1169431	1169537	True	NM_080605,NM_016547,NM_016176	chr1,chr1,chr1	+,-,-	B3GALT6,SDF4,SDF4	-1853,-1984,-1984
chr22:39100596-39100985	chr22	+	39100657	39101001	True	NM_014876,NM_004286	chr22,chr22	-,+	JOSD1,GTPBP1	-4198,805
chrX:137795107-137796729	chrX	+	137795250	137796534	True	NM_004114,NR_028597	chrX,chrX	-,+	FGF13,SRD5A1P1	-1423,732443
chr6:151771809-151772792	chr6	+	151772365	151772827	True	NM_017909,NM_024573	chr6,chr6	-,+	RMND1,C6orf211	545,594
chr7:150027651-150027911	chr7	+	150027661	150027851	True	NM_001142928,NM_138434,NM_001164458,NM_023942	chr7,chr7,chr7,chr7	+,+,-,+	LRRC61,C7orf29,ACTR3C,LRRC61	-7416,-774,-6903,-7416
chr3:158305644-158307091	chr3	+	158305814	158306837	True	NM_022443,NM_020169	chr3,chr3	+,-	MLF1,LXN	-16912,83695
chr17:63055719-63057293	chr17	+	63056699	63057082	True	NM_006572,NM_001165933	chr17,chr17	-,+	GNA13,RGS9	-3779,76373
chr11:78036558-78037874	chr11	+	78036560	78037731	True	NM_020798,NM_012296	chr11,chr11	+,-	USP35,GAB2	-136760,15246
chrX:39725109-39725859	chrX	+	39725210	39725612	True	NM_005765,NM_001123385	chrX,chrX	+,-	ATP6AP2,BCOR	714603,231157
chr2:48118188-48119604	chr2	+	48118316	48119619	True	NM_025133,NM_000179	chr2,chr2	-,+	FBXO11,MSH6	-2458,-108156
chr14:21519609-21521506	chr14	+	21519743	21521368	True	NM_001012264,NM_032572,NM_138331	chr14,chr14,chr14	-,+,+	RNASE13,RNASE7,RNASE8	-16799,-9409,4683
chr6:34521480-34521688	chr6	+	34521580	34521672	True	NM_001199583,NM_012391	chr6,chr6	+,-	PACSIN1,SPDEF	-38982,2469
chr7:131372001-131372338	chr7	+	131372023	131372273	True	NM_005397,NM_013255	chr7,chr7	-,+	PODXL,MKLN1	-130647,-359479
chr18:7231532-7231976	chr18	+	7231541	7231969	True	NM_005559,NM_001105581	chr18,chr18	-,+	LAMA1,LRRC30	-113728,-455
chr1:22890741-22890971	chr1	+	22890783	22891019	True	NM_020526,NR_036214,NM_001006943	chr1,chr1,chr1	+,-,+	EPHA8,MIR4253,EPHA8	-830,298750,-830
chr11:14996028-14996978	chr11	+	14996130	14996945	True	NM_000728,NM_001033953,NM_001033952,NM_001741	chr11,chr11,chr11,chr11	+,-,-,-	CALCB,CALCA,CALCA,CALCA	98200,-2298,-2298,-2298
chr1:187581595-187582317	chr1	+	187581827	187582260	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-932268,-783852
chr20:3149318-3150855	chr20	+	3149330	3150838	True	NM_014731,NM_014948,NM_199415,NM_021826,NM_033453	chr20,chr20,chr20,chr20,chr20	-,-,-,-,+	ProSAPiP1,UBOX5,UBOX5,FASTKD5,ITPA	-123,-8790,-8790,-8798,39217
chr9:131940160-131940404	chr9	+	131940163	131940309	True	NM_203434,NM_001193397	chr9,chr9	-,+	IER5L,PPP2R4	281,-66247
chr7:36429402-36429741	chr7	+	36429401	36429685	True	NM_018685,NM_001100425	chr7,chr7	+,-	ANLN,KIAA0895	-20,99
chr7:1097420-1097813	chr7	+	1097515	1097741	True	NM_138445,NR_029898	chr7,chr7	+,-	GPR146,MIR339	-425,-34853
chr15:33604139-33605248	chr15	+	33604253	33605284	True	NM_001036,NM_001103184	chr15,chr15	+,-	RYR3,FMN1	-1134,-244168
chr17:47840091-47840399	chr17	+	47840090	47840338	True	NM_030802,NM_001199155	chr17,chr17	-,+	FAM117A,MYST2	1232,25642
chr8:98290783-98291220	chr8	+	98290822	98291228	True	NM_033512,NM_178812	chr8,chr8	-,+	TSPYL5,MTDH	-646,365178
chr7:2373430-2373960	chr7	+	2373430	2373508	True	NM_001037283,NM_013321	chr7,chr7	+,-	EIF3B,SNX8	20965,-19331
chr11:119293599-119293805	chr11	+	119293711	119293789	True	NM_006288,NR_034160	chr11,chr11	-,+	THY1,LOC100499227	507,-41274
chr14:89022789-89024374	chr14	+	89022883	89024241	True	NM_207660,NM_207661,NM_001160104,NM_001160103,NM_007039,NM_024824	chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,+,-,+	ZC3H14,ZC3H14,ZC3H14,ZC3H14,PTPN21,ZC3H14	5011,5449,5011,5011,-1760,5011
chr16:88751061-88751618	chr16	+	88751465	88751576	True	NM_001012759,NM_178310	chr16,chr16	+,-	CTU2,SNAI3	21314,1357
chr11:1628859-1629514	chr11	+	1628862	1629516	True	NM_001012708,NM_001001480,NM_001004325	chr11,chr11,chr11	-,+,-	KRTAP5-3,KRTAP5-5,KRTAP5-2	227,21516,-9338
chr15:99646940-99647980	chr15	+	99647193	99647898	True	NM_015286,NM_001167902,NM_145728	chr15,chr15,chr15	+,-,+	SYNM,PGPEP1L,SYNM	-1958,-96169,-1958
chr17:80797840-80798434	chr17	+	80797955	80798292	True	NM_024702,NM_005993	chr17,chr17	-,+	ZNF750,TBCD	-24,-88066
chr11:67054273-67054883	chr11	+	67054298	67054926	True	NM_021173,NR_030767,NM_207354	chr11,chr11,chr11	-,+,+	POLD4,ANKRD13D,ANKRD13D	66176,1889,1835
chr11:126044751-126044999	chr11	+	126044783	126045045	True	NM_001144827,NM_024556	chr11,chr11	-,+	RPUSD4,FAM118B	36592,36573
chr11:46298754-46299202	chr11	+	46298866	46299022	True	NM_000741,NM_052854	chr11,chr11	-,+	CHRM4,CREB3L1	109141,205
chr11:114577598-114578111	chr11	+	114577598	114577740	True	NM_017678,NM_182495	chr11,chr11	-,+	FAM55D,FAM55B	-111114,-28458
chr2:101434561-101435057	chr2	+	101434574	101435020	True	NM_001102426,NM_002518	chr2,chr2	-,+	TBC1D8,NPAS2	332876,1592
chr5:6372668-6372912	chr5	+	6372775	6372909	True	NM_001145161,NM_032286	chr5,chr5	+,-	UBE2QL1,MED10	75826,5780
chr19:19731774-19732906	chr19	+	19731942	19732473	True	NM_004720,NM_025245,NM_033204	chr19,chr19,chr19	-,-,+	LPAR2,PBX4,ZNF101	6623,-2503,47189
chr16:28077533-28077776	chr16	+	28077620	28077776	True	NM_001024401,NM_001109763	chr16,chr16	+,-	SBK1,GSG1L	226063,-2790
chr2:97539150-97539740	chr2	+	97539178	97539676	True	NM_017789,NM_199078	chr2,chr2	-,+	SEMA4C,CNNM3	-3443,-57238
chr1:38457222-38458406	chr1	+	38457447	38457811	True	NM_016037,NM_006802	chr1,chr1	+,-	UTP11L,SF3A3	20572,-1686
chr6:4020655-4021154	chr6	+	4020988	4021190	True	NM_173563,NM_003913	chr6,chr6	-,+	C6orf146,PRPF4B	58317,378
chr22:24315082-24315700	chr22	+	24315241	24315655	True	NM_001355,NM_001084393,NM_001084392,NM_000854	chr22,chr22,chr22,chr22	-,+,-,+	DDT,DDTL,DDT,GSTT2	6414,-6268,1075,6658
chr22:24315082-24315700	chr22	-	24310050	24310464	False	NM_000854,NM_001080843,NM_001084393,NM_001084392	chr22,chr22,chr22,chr22	-,-,+,-	GSTT2,GSTT2B,DDTL,DDT	-6657,-6682,-1075,6268
chr13:19976968-19977505	chr13	+	19976970	19977506	True	NR_034026,NR_027248	chr13,chr13	+,-	LOC100287114,ANKRD26P3	-57832,-57857
chr13:37248657-37248933	chr13	+	37248677	37248925	True	NM_001127217,NM_203451	chr13,chr13	-,+	SMAD9,C13orf36	245534,-679
chr4:15373028-15373336	chr4	+	15373058	15373328	True	NM_001193534,NM_001135171	chr4,chr4	-,+	FBXL5,C1QTNF7	283757,2846
chr12:54071192-54072570	chr12	+	54071208	54072530	True	NM_001002031,NM_005176,NM_134324	chr12,chr12,chr12	-,-,+	ATP5G2,ATP5G2,TARBP2	-696,-1099,-175882
chr9:93401858-93403689	chr9	+	93401864	93403488	True	NM_017594,NM_001135052	chr9,chr9	-,+	DIRAS2,SYK	1670,160523
chr16:69343259-69343772	chr16	+	69343292	69343608	True	NM_022341,NM_013245	chr16,chr16	-,+	PDF,VPS4A	20940,1678
chr16:30063872-30064147	chr16	+	30064068	30064174	True	NM_000034,NM_031478	chr16,chr16	+,-	ALDOA,FAM57B	316,-21882
chr4:4252820-4253427	chr4	+	4252859	4253469	True	NM_032927,NM_145291	chr4,chr4	-,+	TMEM128,ZBTB49	-2925,38454
chr3:67686155-67686867	chr3	+	67686159	67686688	True	NM_001177599,NM_213609	chr3,chr3	-,+	SUCLG2,FAM19A1	18401,366765
chr17:26695048-26695467	chr17	+	26695145	26695457	True	NM_001080837,NM_000638,NM_015077	chr17,chr17,chr17	-,-,+	SEBOX,VTN,SARM1	-2880,1966,3529
chr17:66192619-66192986	chr17	+	66192811	66192961	True	NR_027283,NM_001174166	chr17,chr17	+,-	LOC440461,SLC16A6	1839,94494
chr1:243421999-243422267	chr1	+	243422030	243422315	True	NM_006642,NM_001042405,NM_001042404,NM_014812	chr1,chr1,chr1,chr1	+,-,-,-	SDCCAG8,CEP170,CEP170,CEP170	-2782,-3322,-3322,-3322
chr19:20750603-20752217	chr19	+	20750772	20751740	True	NM_001159293,NR_034060	chr19,chr19	-,+	ZNF737,ZNF85	-2146,354318
chr17:8028120-8028663	chr17	+	8028178	8028656	True	NM_001165967,NR_036201,NM_021628,NM_001165960,NM_032580	chr17,chr17,chr17,chr17,chr17	-,+,-,-,-	HES7,MIR4314,ALOXE3,ALOXE3,HES7	-768,-36863,-6318,-5944,-768
chr1:162350218-162351773	chr1	+	162350341	162351705	True	NM_001135240,NM_001085375,NM_182581	chr1,chr1,chr1	+,+,-	C1orf226,C1orf226,C1orf111	-1696,-186,-3697
chr11:108464244-108464611	chr11	+	108464267	108464512	True	NM_015065,NM_004398	chr11,chr11	-,+	EXPH5,DDX10	-30,71303
chr11:22364415-22364813	chr11	+	22364506	22364766	True	NM_020346,NM_022725	chr11,chr11	+,-	SLC17A6,FANCF	-4890,282671
chr6:112187838-112188512	chr6	+	112187946	112188405	True	NM_002037,NM_003880	chr6,chr6	-,+	FYN,WISP3	6277,186872
chr5:121413600-121413934	chr5	+	121413640	121413842	True	NM_002317,NM_207317,NM_001178102	chr5,chr5,chr5	-,+,-	LOX,ZNF474,LOX	263,51372,-722
chr19:2460145-2460795	chr19	+	2460204	2460350	True	NM_032737,NM_015675	chr19,chr19	-,+	LMNB2,GADD45B	-3246,15772
chr6:72129581-72129803	chr6	+	72129585	72129733	True	NM_024576,NR_026807	chr6,chr6	+,-	OGFRL1,C6orf155	-131159,765
chr3:192118248-192120093	chr3	+	192118586	192119899	True	NM_020386,NM_021032	chr3,chr3	+,-	HRASLS,FGF12	839018,6990
chr13:32884031-32885092	chr13	+	32884086	32885126	True	NM_000059,NM_001136571	chr13,chr13	+,-	BRCA2,ZAR1L	4490,1017
chr7:155253025-155253423	chr7	+	155253041	155253293	True	NM_001103176,NM_001427	chr7,chr7	-,+	CNPY1,EN2	73296,-2269
chr19:40730105-40730384	chr19	+	40730154	40730326	True	NM_002446,NM_152479,NM_024877	chr19,chr19,chr19	+,-,-	MAP3K10,TTC9B,CNTD2	-32554,-5848,2321
chr3:44462013-44462899	chr3	+	44462224	44462862	True	NM_173826,NM_181489	chr3,chr3	+,-	C3orf23,ZNF445	-82331,56350
chr17:48229868-48230106	chr17	+	48229872	48230072	True	NM_032595,NM_000023	chr17,chr17	-,+	PPP1R9B,SGCA	-1995,13293
chr7:99772379-99773974	chr7	+	99772411	99773433	True	NM_024637,NM_152742,NM_012447	chr7,chr7,chr7	-,-,+	GAL3ST4,GPC2,STAG3	-6038,1607,2104
chr10:69829653-69830330	chr10	+	69829826	69829908	True	NM_015601,NM_032578,NM_022079	chr10,chr10,chr10	-,+,-	HERC4,MYPN,HERC4	5251,39341,5251
chr1:165798209-165798427	chr1	+	165798231	165798427	True	NM_019026,NM_012474	chr1,chr1	-,+	TMCO1,UCK2	-60096,-1550
chr9:33289625-33290188	chr19	+	13251857	13251917	False	NM_004907,NM_003765	chr19,chr19	+,-	IER2,STX10	9364,9120
chr9:33289625-33290188	chr9	+	33289687	33290001	True	NM_147134,NM_002504,NM_004323,NM_147133	chr9,chr9,chr9,chr9	+,+,-,+	NFX1,NFX1,BAG1,NFX1	416,416,-24928,416
chr1:117907446-117908310	chr1	+	117907445	117908333	True	NM_006699,NM_024626	chr1,chr1	+,-	MAN1A2,VTCN1	1751,-153896
chr20:18485678-18486063	chr20	+	18485899	18486088	True	NM_006606,NM_006363,NM_032986,NM_032985,NM_001172746,NM_001172745	chr20,chr20,chr20,chr20,chr20,chr20	-,+,+,+,+,+	RBBP9,SEC23B,SEC23B,SEC23B,SEC23B,SEC23B	-8012,2099,2099,2099,2121,2518
chr11:796359-796567	chr11	+	796468	796604	True	NM_145887,NM_145886,NM_024698,NM_001191060,NM_001191061,NM_001004,NM_016564	chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,-,+,-	LRDD,LRDD,SLC25A22,SLC25A22,SLC25A22,RPLP2,CEND1	8696,8696,-205,1441,1715,13331,-6342
chr15:25296239-25297001	chr15	+	25296277	25297049	True	NR_003317,NR_003316,NR_003324,NR_001289,NR_003318,NM_130838,NR_003319,NR_001295	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,-,+,+	SNORD116-2,SNORD116-1,SNORD116-9,SNORD109B,SNORD116-3,UBE3A,SNORD116-4,SNORD109A	2306,-107,4956,-9207,4956,353654,7634,-9207
chrX:49120377-49121781	chrX	+	49120388	49121495	True	NM_001114377,NM_033215,NM_001184745,NM_014009	chrX,chrX,chrX,chrX	-,+,+,-	FOXP3,PPP1R3F,PPP1R3F,FOXP3	96,4810,4810,96
chr1:92628834-92630309	chr1	+	92629213	92629687	True	NM_053274,NM_015237	chr1,chr1	-,+	GLMN,KIAA1107	134934,2921
chr19:18547761-18547971	chr19	+	18547767	18547971	True	NM_032627,NM_001170939,NM_001170938,NM_016368	chr19,chr19,chr19,chr19	+,-,-,-	SSBP4,ISYNA1,ISYNA1,ISYNA1	-17672,1000,1190,1190
chr1:23810083-23810456	chr1	+	23810167	23810447	True	NR_033691,NM_001143778,NM_017707	chr1,chr1,chr1	+,-,-	C1orf213,ASAP3,ASAP3	-114507,353,353
chr19:16186017-16187022	chr19	+	16186056	16186937	True	NM_001145160,NM_003290,NM_054113	chr19,chr19,chr19	+,+,-	TPM4,TPM4,CIB3	-7790,197,97399
chrX:123480723-123480935	chrX	+	123480765	123480953	True	NM_002351,NM_001114937,NM_001081550	chrX,chrX,chrX	+,+,-	SH2D1A,SH2D1A,THOC2	-684,-684,-613861
chr2:224462307-224462856	chr2	+	224462394	224462798	True	NM_022915,NM_003469	chr2,chr2	+,-	MRPL44,SCG2	359322,4469
chr19:47733363-47733717	chr19	+	47733366	47733596	True	NM_001127241,NM_001127240,NM_001127242,NR_036159,NR_036158,NM_014417	chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,+,-	BBC3,BBC3,BBC3,MIR3191,MIR3190,BBC3	2477,2477,2477,-3090,-3218,905
chr10:104209712-104210056	chr10	+	104209953	104210073	True	NM_024789,NM_024886	chr10,chr10	+,-	TMEM180,C10orf95	11096,1277
chr6:42187160-42188628	chr6	+	42187723	42188328	True	NM_000409,NM_018141	chr6,chr6	+,-	GUCA1A,MRPS10	-64637,-2090
chr17:38953469-38953720	chr17	+	38953563	38953733	True	NM_001195387,NM_181535	chr17,chr17	+,-	TMEM99,KRT28	21610,2528
chr14:61787171-61787437	chr14	+	61787365	61787437	True	NM_001017970,NM_006255	chr14,chr14	-,+	TMEM30B,PRKCH	-38835,1077
chrX:85269612-85270177	chrX	+	85269625	85270134	True	NM_001139514,NM_000390	chrX,chrX	+,-	DACH2,CHM	133320,32482
chr20:34118746-34120138	chr20	+	34118903	34119942	True	NM_198398,NM_015966,NR_026933,NM_001145350	chr20,chr20,chr20,chr20	+,+,-,-	ERGIC3,ERGIC3,C20orf173,C20orf173	9835,9835,-1422,-1422
chr2:62129563-62131304	chr2	+	62129812	62131078	True	NM_006430,NM_152516	chr2,chr2	-,+	CCT4,COMMD1	-14021,1724
chr11:61383691-61384366	chr11	+	61383690	61384164	True	NM_004200,NR_002775	chr11,chr11	-,+	SYT7,RPLP0P2	-35392,-1233
chr10:121292766-121293621	chr10	+	121293049	121293495	True	NM_001005339,NM_002925,NM_004281	chr10,chr10,chr10	-,-,+	RGS10,RGS10,BAG3	8785,2608,117386
chrX:55187706-55187966	chrX	+	55187751	55187965	True	NM_138362,NM_001166702,NR_030722,NM_001166700,NM_001166699,NM_130467,NM_001166704,NM_001166701,NM_001166703	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,-,+,-,-,-	FAM104B,FAM104B,FAM104B,FAM104B,FAM104B,PAGE5,FAM104B,FAM104B,FAM104B	-123,-184,-123,-123,-123,58825,-123,-123,-216
chr1:227922079-227922653	chr1	+	227922155	227922547	True	NR_024485,NM_053052,NR_024486,NM_001161465,NM_023007	chr1,chr1,chr1,chr1,chr1	+,+,+,-,-	LOC100130093,SNAP47,LOC100130093,JMJD4,JMJD4	-5966,149,-5966,615,615
chr1:86861604-86861988	chr1	+	86861623	86862012	True	NM_001184765,NM_001184766,NM_006536,NM_020729,NM_001007022	chr1,chr1,chr1,chr1,chr1	-,-,+,-,-	ODF2L,ODF2L,CLCA2,ODF2L,ODF2L	63,63,27756,63,63
chr13:31306749-31307012	chr13	+	31306763	31306915	True	NM_001629,NM_002128	chr13,chr13	+,-	ALOX5AP,HMGB1	2729,-266682
chr4:164394684-164395013	chr4	+	164394688	164394914	True	NM_032136,NM_018352	chr4,chr4	-,+	TKTL2,C4orf43	183,20758
chr7:105171655-105172545	chr7	+	105171853	105172459	True	NM_021930,NM_019042	chr7,chr7	+,-	RINT1,PUS7	72,-9168
chr12:101603310-101603680	chr12	+	101603327	101603611	True	NM_014503,NM_145913	chr12,chr12	+,-	UTP20,SLC5A8	70293,455
chr17:31255563-31256422	chr17	+	31255656	31256340	True	NM_001033504,NM_015544,NM_015194	chr17,chr17,chr17	+,+,-	TMEM98,TMEM98,MYO1D	-779,-779,-51754
chrX:17757507-17757891	chrX	+	17757510	17757696	True	NM_006746,NM_001037540,NR_033348,NM_001037535,NM_001037536	chrX,chrX,chrX,chrX,chrX	+,+,-,+,+	SCML1,SCML1,RAI2,SCML1,SCML1	-1970,-1970,121305,-1970,-1970
chr19:7829536-7830728	chr19	+	7830022	7830600	True	NR_026709,NM_001144910,NR_026707,NM_001144911,NR_026692,NM_014257,NM_001144905,NM_001144904,NM_001144907,NM_001144906,NM_001144909,NM_001144908,NR_026708	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,-,+,+,+,+,+,+,+,+	CLEC4M,CLEC4M,CLEC4M,CLEC4M,CD209,CLEC4M,CLEC4M,CLEC4M,CLEC4M,CLEC4M,CLEC4M,CLEC4M,CLEC4M	-2038,-2038,-2038,-2038,-17558,-2038,-2038,-2038,-2038,-2038,-2038,-2038,-2038
chr10:121632163-121632545	chr10	+	121632173	121632533	True	NM_024834,NM_007190	chr10,chr10	-,+	MCMBP,SEC23IP	49,19551
chr14:62299124-62299449	chr14	+	62299444	62299500	True	NM_001017970,NM_003082	chr14,chr14	-,+	TMEM30B,SNAPC1	-550914,-70420
chr18:29305965-29306364	chr18	+	29305984	29306350	True	NM_001034172,NM_000371	chr18,chr18	-,+	MCART2,TTR	34543,-134316
chr4:85882222-85884120	chr4	+	85882383	85884172	True	NM_014991,NR_015359	chr4,chr4	-,+	WDFY3,NCRNA00247	3431,3798
chr2:73299014-73299328	chr2	+	73299044	73299310	True	NM_144579,NM_001134462	chr2,chr2	-,+	SFXN5,NOTO	-79,130075
chr13:113776326-113777787	chr13	+	113776351	113777499	True	NM_000504,NM_001127202	chr13,chr13	+,-	F10,PCID2	15,85580
chr12:7455541-7456341	chr12	+	7455541	7456371	True	NM_174941,NM_001080454	chr12,chr12	-,+	CD163L1,ACSM4	140428,556
chr4:152345340-152346828	chr4	+	152345637	152346462	True	NM_001128923,NM_001109977	chr4,chr4	-,+	SH3D19,FAM160A1	-197977,-15296
chr4:40334420-40336048	chr4	+	40334653	40335787	True	NM_019027,NM_017581	chr4,chr4	-,+	RBM47,CHRNA9	182253,1681
chr19:1020637-1020866	chr19	+	1020758	1020886	True	NM_004368,NM_033420,NM_001033026,NM_201277	chr19,chr19,chr19,chr19	+,-,-,+	CNN2,C19orf6,C19orf6,CNN2	5411,305,305,5411
chr8:92041442-92042049	chr8	+	92041600	92041962	True	NM_016023,NM_018710	chr8,chr8	+,-	OTUD6B,TMEM55A	40461,11307
chr16:79634301-79634706	chr16	+	79634326	79634707	True	NM_005360,NM_130897,NM_001031804	chr16,chr16,chr16	-,+,-	MAF,DYNLRB2,MAF	7,940146,7
chr16:3406098-3406320	chr16	+	3406117	3406321	True	NM_012368,NM_001190476	chr16,chr16	+,-	OR2C1,MTRNR2L4	-279,16012
chr16:11680969-11681200	chr16	+	11680988	11681216	True	NM_003498,NM_004862,NR_024320,NM_001136472,NM_001136473	chr16,chr16,chr16,chr16,chr16	+,-,-,-,-	SNN,LITAF,LITAF,LITAF,LITAF	81072,-759,156,-182,-182
chr17:61905121-61906882	chr17	+	61905236	61906655	True	NM_002805,NM_001199163,NM_017647	chr17,chr17,chr17	+,+,-	PSMC5,PSMC5,FTSJ3	-517,-243,-205
chr16:728962-729352	chr16	+	728967	729209	True	NM_001005920,NM_003961,NM_005861	chr16,chr16,chr16	-,+,+	JMJD8,RHBDL1,STUB1	5280,-2943,905
chr11:113840890-113842709	chr11	+	113841006	113842515	True	NM_000869,NM_213621,NM_001161772,NM_020886	chr11,chr11,chr11,chr11	+,+,+,-	HTR3A,HTR3A,HTR3A,USP28	3281,3281,5706,-94750
chr4:164509276-164509763	chr4	+	164509336	164509747	True	NM_017923,NM_018352	chr4,chr4	-,+	MARCH1,C4orf43	25088,-93714
chr18:13622145-13623196	chr18	+	13622254	13623196	True	NM_001098801,NM_181483,NM_004338	chr18,chr18,chr18	-,+,+	C18orf19,C18orf1,C18orf1	103445,-1438,-1438
chrX:152485509-152486148	chrX	+	152485756	152486190	True	NM_001080485,NM_004988	chrX,chrX	+,-	ZNF275,MAGEA1	113422,-24
chr8:6738307-6739146	chr8	+	6738959	6739141	True	NM_005218,NM_018361	chr8,chr8	-,+	DEFB1,AGPAT5	-3430,-173139
chr11:7982728-7983873	chr11	+	7982820	7983692	True	NM_003754,NM_176821	chr11,chr11	+,-	EIF3F,NLRP10	25174,1417
chr16:50093561-50094892	chr16	+	50093588	50094821	True	NM_182922,NM_015069	chr16,chr16	+,-	HEATR3,ZNF423	5059,-232670
chr17:42083343-42083635	chr17	+	42083375	42083621	True	NM_004160,NM_032376,NM_153006	chr17,chr17,chr17	-,-,+	PYY,TMEM101,NAGS	-1538,8774,-1394
chr1:192778895-192779363	chr1	+	192778935	192779352	True	NM_002923,NM_001199261	chr1,chr1	+,-	RGS2,UCHL5	-824,249221
chr19:15732071-15733986	chr19	+	15732720	15734006	True	NM_007253,NM_052890	chr19,chr19	+,-	CYP4F8,PGLYRP2	-6742,-142405
chr10:85949444-85950514	chr10	+	85949618	85950466	True	NM_033100,NM_001171971,NM_001017924	chr10,chr10,chr10	+,+,-	CDHR1,CDHR1,LRIT2	3945,3945,34868
chr1:41251313-41252165	chr1	+	41251618	41252163	True	NM_004700,NM_172163,NM_133467	chr1,chr1,chr1	+,+,-	KCNQ4,KCNQ4,CITED4	-1985,-1985,75905
chr1:55273108-55273577	chr1	+	55273217	55273544	True	NM_017904,NM_001114108,NM_152607,NM_001110533	chr1,chr1,chr1,chr1	-,-,+,+	TTC22,TTC22,C1orf177,C1orf177	-6276,-6276,-1532,-1532
chr8:77594279-77594585	chr8	+	77594369	77594429	True	NM_024721,NR_024360	chr8,chr8	+,-	ZFHX4,LOC100192378	-905,1131
chr12:103888656-103889183	chr12	+	103888708	103889101	True	NM_198521,NM_017564,NM_001099336	chr12,chr12,chr12	-,+,-	C12orf42,STAB2,C12orf42	695,91967,698
chr20:43147407-43147927	chr20	+	43147648	43147944	True	NM_198941,NM_007066,NM_006811	chr20,chr20,chr20	-,+,-	SERINC3,PKIG,SERINC3	2832,12491,2832
chr3:19194282-19195215	chr3	+	19194530	19195039	True	NM_001131010,NM_144633	chr3,chr3	-,+	SATB1,KCNH8	-714265,-4573
chr15:43478093-43479166	chr15	+	43478234	43479131	True	NR_027513,NM_000119,NR_027514,NM_012142,NM_037370	chr15,chr15,chr15,chr15,chr15	+,-,+,+,+	CCNDBP1,EPB42,CCNDBP1,CCNDBP1,CCNDBP1	-819,34250,-819,-819,-147
chr3:194158059-194158743	chr3	+	194158059	194158465	True	NR_033929,NM_024524	chr3,chr3	+,-	FLJ34208,ATP13A3	49403,30559
chr19:41353752-41354104	chr19	+	41353913	41353999	True	NM_000762,NM_053046	chr19,chr19	-,+	CYP2A6,EGLN2	2403,-48630
chr3:170744962-170745824	chr3	+	170744976	170745838	True	NM_000340,NM_001185056	chr3,chr3	-,+	SLC2A2,CLDN11	-208,-606000
chr7:39606266-39607691	chr7	+	39606285	39607416	True	NM_138701,NM_020192	chr7,chr7	-,+	C7orf11,C7orf36	566885,-341
chr10:6095474-6095918	chr10	+	6095473	6095866	True	NM_032905,NM_000417	chr10,chr10	+,-	RBM17,IL2RA	35082,8517
chr4:89618531-89619637	chr4	+	89618660	89619584	True	NR_002806,NM_153757	chr4,chr4	+,-	FAM13AOS,NAP1L5	11355,-43
chr1:95005666-95006144	chr1	+	95005665	95006185	True	NM_001178096,NM_001993,NM_002858	chr1,chr1,chr1	-,-,+	F3,F3,ABCD3	1278,1278,-121783
chr2:241624201-241624639	chr2	+	241624285	241624481	True	NM_198998,NM_001102467	chr2,chr2	+,-	AQP12A,AQP12B	6780,-1968
chr2:241624201-241624639	chr2	-	241629107	241629303	False	NM_198998,NM_001102467	chr2,chr2	+,-	AQP12A,AQP12B	1958,-6790
chr5:175225066-175225661	chr5	+	175225128	175225700	True	NM_032361,NM_006650	chr5,chr5	-,+	THOC3,CPLX2	169895,-1569
chr1:28878737-28879415	chr1	+	28878736	28879463	True	NM_017846,NR_003109,NR_003077	chr1,chr1,chr1	+,+,-	TRNAU1AP,TRNAU1AP,SNORD99	65,65,25921
chr14:105329585-105330013	chr14	+	105329605	105329895	True	NM_015005,NM_001112726,NM_001014432	chr14,chr14,chr14	+,+,-	KIAA0284,KIAA0284,AKT1	1754,1754,-67525
chr1:228132780-228133234	chr1	+	228132783	228133275	True	NM_033131,NM_003395	chr1,chr1	+,-	WNT3A,WNT9A	61447,2451
chr2:132483882-132485271	chr2	+	132484036	132485311	True	NM_214461,NM_013310	chr2,chr2	-,+	C2orf27B,C2orf27A	73976,-4027
chr10:1071900-1072140	chr10	+	1071907	1072050	True	NM_033261,NR_024628,NR_024629,NR_027708,NR_027709	chr10,chr10,chr10,chr10,chr10	-,+,+,+,+	IDI2,IDI2-AS1,IDI2-AS1,IDI2-AS1,IDI2-AS1	-108,-3393,-3393,-3393,-3393
chr19:10339114-10339382	chr19	+	10339170	10339258	True	NR_036206,NM_004230	chr19,chr19	+,-	MIR4322,S1PR2	1830,2740
chr15:34502972-34503236	chr15	+	34503025	34503275	True	NM_024713,NM_016454	chr15,chr15	-,+	C15orf29,TMEM85	-728,13969
chr7:73584977-73585535	chr7	+	73585135	73585544	True	NM_002914,NM_031992,NM_022170	chr7,chr7,chr7	-,+,+	RFC2,EIF4H,EIF4H	83248,3161,3161
chr5:56507569-56508801	chr5	+	56507681	56508844	True	NM_152622,NM_001127236	chr5,chr5	-,+	MIER3,GPBP1	-259727,1056
chr15:41062359-41062770	chr15	+	41062413	41062743	True	NM_018145,NM_001130448,NM_005258	chr15,chr15,chr15	-,+,+	FAM82A2,C15orf62,GCHFR	-14955,-305,-6179
chr10:53458897-53459171	chr10	+	53458971	53459213	True	NR_030336,NM_015235	chr10,chr10	+,-	MIR605,CSTF2T	-399689,192
chr3:196296216-196296500	chr3	+	196296257	196296499	True	NM_001105573,NM_182627	chr3,chr3	+,-	FBXO45,WDR53	-583,-844
chr1:16172263-16172516	chr1	+	16172363	16172526	True	NR_024279,NM_015001	chr1,chr1	-,+	FLJ37453,SPEN	2171,1832
chr9:19380562-19381646	chr9	+	19380951	19381689	True	NM_001010,NM_001010887	chr9,chr9	-,+	RPS6,ACER2	-716,27235
chr2:27341955-27342426	chr2	+	27342012	27342376	True	NM_032604,NM_001166240,NM_006569,NM_001166239,NM_001166241	chr2,chr2,chr2,chr2,chr2	+,-,-,-,-	ABHD1,CGREF1,CGREF1,CGREF1,CGREF1	4280,-17,-17,-239,-8042
chr4:124323360-124323681	chr4	+	124323385	124323663	True	NM_198041,NM_199327,NM_005841	chr4,chr4,chr4	-,+,+	NUDT6,SPRY1,SPRY1	-479262,-5480,-2753
chr6:35653681-35655657	chr6	+	35654349	35655684	True	NM_004117,NM_145028,NM_001145777,NM_001145776	chr6,chr6,chr6,chr6	-,+,-,-	FKBP5,C6orf81,FKBP5,FKBP5	1085,49174,1085,1058
chr22:31358106-31359048	chr22	+	31358655	31358961	True	NM_014941,NR_002323	chr22,chr22	-,+	MORC2,TUG1	5288,6672
chr10:6611451-6613135	chr10	+	6611706	6613161	True	NR_036502,NR_036503,NM_006257	chr10,chr10,chr10	+,+,-	LOC439949,LOC439949,PRKCQ	9225,9225,9127
chr17:40908929-40910568	chr17	+	40909315	40910599	True	NR_024462,NR_024461,NM_005854	chr17,chr17,chr17	-,-,+	LOC100190938,LOC100190938,RAMP2	2727,2727,2612
chr5:102461495-102462542	chr5	+	102461625	102462401	True	NM_017676,NM_015216	chr5,chr5	-,+	GIN1,PPIP5K2	-5783,2855
chr17:61029242-61030137	chr17	+	61029370	61030157	True	NM_152598,NM_025185	chr17,chr17	-,+	MARCH10,TANC2	-143665,56740
chr14:96507028-96507267	chr14	+	96507177	96507313	True	NM_018036,NR_023938	chr14,chr14	-,+	ATG2B,C14orf132	322415,-1573
chr12:48497916-48499398	chr12	+	48498075	48499381	True	NM_014554,NM_001166686	chr12,chr12	-,+	SENP1,PFKM	311,274
chr17:43393607-43393890	chr17_ctg5_hap1	+	8803	9053	False	NM_001159330,NM_001113738	chr17_ctg5_hap1,chr17_ctg5_hap1	-,+	ARHGAP27,ARL17A	89582,186667
chr17:43393607-43393890	chr17	+	43393667	43393917	True	NM_003954,NR_024435	chr17,chr17	-,+	MAP3K14,LOC100133991	547,-54160
chr5:125966961-125968399	chr5	+	125967277	125968305	True	NM_001202404,NM_207408	chr5,chr5	-,+	ALDH7A1,C5orf48	-36195,86
chr11:5669044-5669315	chr11	+	5669061	5669360	True	NM_033034,NR_002777	chr11,chr11	-,+	TRIM5,TRIM78P	37036,-4701
chr17:7119652-7120739	chr17	+	7119819	7120472	True	NM_001365,NR_029896,NM_001128827,NM_000018,NM_001033859	chr17,chr17,chr17,chr17,chr17	-,-,-,+,+	DLG4,MIR324,DLG4,ACADVL,ACADVL	2947,6276,506,2680,2680
chr3:46916367-46916787	chr3	+	46916495	46916835	True	NM_000316,NM_001184744,NM_000258	chr3,chr3,chr3	+,+,-	PTH1R,PTH1R,MYL3	2400,6903,-11522
chr1:156551185-156551821	chr1	+	156551229	156551861	True	NM_144772,NM_178229,NM_001105669	chr1,chr1,chr1	+,-,+	APOA1BP,IQGAP3,TTC24	9696,-8833,-1761
chr17:72362541-72363054	chr17	+	72362991	72363061	True	NM_181790,NM_001080466	chr17,chr17	+,-	GPR142,BTBD17	583,-5033
chr7:76253086-76254169	chr7	+	76253270	76254169	True	NR_029411,NM_152992,NM_012230	chr7,chr7,chr7	+,-,-	LOC100133091,POMZP3,POMZP3	-74663,2501,2501
chr7:76253086-76254169	chr7	+	75069512	75069566	False	NM_001099415,NR_033322	chr7,chr7	-,+	POM121C,NSUN5P1	46052,-29943
chr7:76253086-76254169	chr7	-	76081967	76082024	False	NM_020892,NR_003262,NM_001102594,NM_001102595	chr7,chr7,chr7,chr7	+,-,+,+	DTX2,FDPSL2A,DTX2,DTX2	8947,22350,8947,8947
chr7:76253086-76254169	chr7	-	76580049	76580106	False	NR_023383,NM_006682	chr7,chr7	+,-	PMS2P11,FGL2	30032,249101
chr19:49559233-49559516	chr19	+	49559396	49559462	True	NM_033183,NM_006179,NM_033043,NM_033142	chr19,chr19,chr19,chr19	-,-,+,-	CGB8,NTF4,CGB5,CGB7	-7028,7712,-12345,-399
chr17:30267951-30268962	chr17	+	30268047	30268125	True	NM_018428,NM_015355	chr17,chr17	-,+	UTP6,SUZ12	-39318,-4062
chr17:30267951-30268962	chr17	+	29062671	29062733	False	NM_015986,NR_024187	chr17,chr17	-,+	CRLF3,SUZ12P	89099,-26103
chr16:23314339-23314672	chr16	+	23314376	23314528	True	NM_153603,NM_000336	chr16,chr16	-,+	COG7,SCNN1B	150034,-836
chrX:123099771-123100825	chrX	+	123099917	123100713	True	NM_001042751,NM_001042750,NM_006603,NM_001081550,NM_001042749	chrX,chrX,chrX,chrX,chrX	+,+,+,-,+	STAG2,STAG2,STAG2,THOC2,STAG2	-4412,-4412,-4412,-233013,-5493
chr17:38210305-38210781	chr17	+	38210402	38210798	True	NM_014815,NM_001079518,NM_199334,NM_001190919,NM_001190918,NM_003250	chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,+,+,+	MED24,MED24,THRA,THRA,THRA,THRA	141,141,8269,7647,8269,8269
chr21:40177546-40177850	chr21	+	40177576	40177898	True	NR_027065,NM_005239	chr21,chr21	-,+	NCRNA00114,ETS2	-32175,-20
chr19:53693479-53693906	chr19	+	53693596	53693914	True	NM_024733,NM_173856	chr19,chr19	-,+	ZNF665,VN1R2	2755,67630
chr6:132276025-132277931	chr6	+	132276048	132277467	True	NM_006208,NM_001901	chr6,chr6	+,-	ENPP1,CTGF	-146943,-3530
chr16:433038-433502	chr16	+	433268	433520	True	NM_021259,NR_024453	chr16,chr16	-,+	TMEM8A,LOC100134368	-1318,-1078
chr9:19049764-19050334	chr9	+	19049868	19050290	True	NM_006570,NR_003009	chr9,chr9	+,-	RRAGA,SCARNA8	-552,13544
chr2:68956118-68957636	chr2	+	68956264	68957365	True	NM_001007231,NM_001166277,NM_014482	chr2,chr2,chr2	+,+,-	ARHGAP25,ARHGAP25,BMP10	4547,4547,141339
chr1:205409389-205410330	chr1	+	205409619	205410149	True	NM_002596,NR_029893	chr1,chr1	+,-	CDK18,MIR135B	63534,7427
chr17:29421414-29421653	chr17	+	29421487	29421551	True	NM_001128147,NM_001042492,NM_000267,NM_024683	chr17,chr17,chr17,chr17	+,+,+,-	NF1,NF1,NF1,C17orf42	393,393,393,-188201
chr1:6454134-6454446	chr1	+	6454221	6454480	True	NM_007274,NM_181864,NM_031475	chr1,chr1,chr1	-,-,+	ACOT7,ACOT7,ESPN	-395,-8338,30367
chr10:104539448-104539678	chr10	+	104539456	104539634	True	NM_000102,NM_017787	chr10,chr10	-,+	CYP17A1,C10orf26	57706,-3619
chr16:48401383-48402463	chr16	+	48401407	48402185	True	NM_001006610,NM_031490	chr16,chr16	-,+	SIAH1,LONP2	-1623,-123254
chr19:57832744-57834650	chr19	+	57832800	57834360	True	NM_020633,NM_213598	chr19,chr19	-,+	VN1R1,ZNF543	133797,-996
chr5:177592125-177592572	chr5	+	177592408	177592500	True	NM_022762,NM_017838	chr5,chr5	+,-	RMND5B,NHP2	-34431,-11447
chr4:1858616-1858922	chr4	+	1858731	1858859	True	NM_012318,NM_001042424	chr4,chr4	-,+	LETM1,WHSC1	-757,14263
chr20:35580553-35582544	chr20	+	35580566	35582082	True	NM_015474,NM_080628	chr20,chr20	-,+	SAMHD1,C20orf118	-320,-76048
chrX:64627380-64627630	chrX	+	64627491	64627577	True	NM_001010888,NM_001170649	chrX,chrX	+,-	ZC3H12B,LAS1L	81037,127159
chr7:99572616-99573039	chr7	+	99572615	99573057	True	NM_001185,NR_036679	chr7,chr7	-,+	AZGP1,AZGP1P1	728,5327
chr10:94832702-94833230	chr10	+	94832809	94833249	True	NM_013451,NM_057157,NM_000783	chr10,chr10,chr10	-,+,+	MYOF,CYP26A1,CYP26A1	408875,-18,397
chr14:24777070-24777526	chr14	+	24777124	24777520	True	NM_001164692,NM_174913,NM_001136050,NM_019839,NM_138452,NM_001143919,NM_181657,NM_014430	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,+,-,+,-,+,+,-	LTB4R2,C14orf21,DHRS1,LTB4R2,DHRS1,LTB4R,LTB4R,CIDEB	1836,-8077,-8085,1836,-8458,3184,4792,3106
chr8:101662825-101663171	chr8	+	101662881	101663057	True	NR_033962,NM_152628	chr8,chr8	+,-	FLJ42969,SNX31	401224,-988
chr11:62691154-62691803	chr11	+	62691220	62691700	True	NR_037193,NM_000738	chr11,chr11	+,-	SLC3A2,CHRM1	-42100,-2208
chr9:132816756-132817729	chr9	+	132816790	132817469	True	NM_001136557,NM_015033,NM_020960,NM_001136558	chr9,chr9,chr9,chr9	+,-,+,+	GPR107,FNBP1,GPR107,GPR107	-856,-11317,-856,-856
chr17:60353548-60354135	chr17	+	60353702	60354121	True	NR_027486,NM_001144933	chr17,chr17	-,+	TBC1D3P2,EFCAB3	-686,93457
chr17:60353548-60354135	chr17	+	36349666	36349723	False	NM_032258,NM_001123391	chr17,chr17	-,-	TBC1D3F,TBC1D3	-1000,-1000
chr17:60353548-60354135	chr17	+	58097123	58097554	False	NM_003161,NR_002924	chr17,chr17	+,-	RPS6KB1,DHX40P1	-126731,-787
chr17:60353548-60354135	chr17	-	58203713	58204144	False	NM_000717,NR_027408	chr17,chr17	+,-	CA4,LOC653653	23157,-23433
chr12:32109796-32110883	chr12	+	32110064	32110704	True	NM_018169,NM_001013699	chr12,chr12	+,-	C12orf35,H3F3C	1648,-164889
chr7:150779361-150779708	chr7	+	150779461	150779695	True	NM_031434,NM_031946,NM_001042535,NM_001136044,NM_033015,NM_006712	chr7,chr7,chr7,chr7,chr7,chr7	-,+,+,-,-,-	TMUB1,AGAP3,AGAP3,TMUB1,FASTK,FASTK	768,4130,4130,975,-1510,-1510
chr9:131791715-131792180	chr9	+	131791725	131792086	True	NM_020145,NM_032809	chr9,chr9	-,+	SH3GLB2,FAM73B	-1146,7166
chr19:2455721-2455951	chr19	+	2455750	2455922	True	NM_032737,NM_015675	chr19,chr19	-,+	LMNB2,GADD45B	1086,20200
chr13:45480540-45482017	chr13	+	45480766	45481798	True	NM_012345,NM_018559	chr13,chr13	-,+	NUFIP1,KIAA1704	81865,81888
chr5:95086331-95087425	chr5	+	95086371	95087075	True	NM_031952,NM_014899	chr5,chr5	-,+	SPATA9,RHOBTB3	-67657,-19572
chr1:171452560-171452858	chr1	+	171452606	171452673	True	NM_000261,NM_015172	chr1,chr1	-,+	MYOC,PRRC2C	169157,1992
chr11:8177475-8178437	chr11	+	8177485	8178387	True	NM_177972,NM_001135109	chr11,chr11	+,-	TUB,RIC3	-74627,12253
chr17:79347705-79348109	chr17	+	79347757	79347927	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	25612,-43283
chr19:10399437-10399719	chr19	+	10399569	10399719	True	NM_022377,NM_001544,NM_001039132,NM_003259,NM_001103167	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	ICAM4,ICAM4,ICAM4,ICAM5,ZGLP1	-1970,-1970,-1970,935,20564
chr17:73721871-73722873	chr17	+	73721874	73722206	True	NM_000154,NM_000213,NM_001005619,NM_001005731	chr17,chr17,chr17,chr17	-,+,+,+	GALK1,ITGB4,ITGB4,ITGB4	39124,-4409,-1149,-4409
chr17:17481185-17482711	chr17	+	17481356	17482703	True	NM_007169,NM_018019,NM_030665,NM_148173	chr17,chr17,chr17,chr17	-,+,+,-	PEMT,MED9,RAI1,PEMT	3092,-101107,102083,-577
chr12:40624591-40625831	chr12	+	40624623	40625461	True	NM_052885,NM_198578	chr12,chr12	-,+	SLC2A13,LRRK2	-124962,-5873
chr16:70145001-70145317	chr16	+	70145107	70145363	True	NM_017990,NR_003610	chr16,chr16	+,-	PDPR,PDXDC2P	2165,-45256
chr16:70145001-70145317	chr16	-	74405044	74405178	False	NR_026950,NM_002811	chr16,chr16	-,+	LOC283922,PSMD7	-2891,-74422
chr11:101982709-101983407	chr11	+	101982712	101983368	True	NM_001130145,NM_001195045,NM_001195044,NM_006106,NM_178127	chr11,chr11,chr11,chr11,chr11	+,+,+,+,-	YAP1,YAP1,YAP1,YAP1,ANGPTL5	-1571,-122,-1571,-1571,-195459
chr2:25140323-25140530	chr2	+	25140399	25140529	True	NR_034113,NM_004036	chr2,chr2	+,-	LOC729723,ADCY3	54451,1576
chr19:15341754-15342182	chr19	+	15341797	15342207	True	NM_033025,NM_001142886,NM_024794	chr19,chr19,chr19	+,-,-	SYDE1,EPHX3,EPHX3	-123634,1701,1074
chr19:42131591-42133455	chr19	+	42131804	42132959	True	NM_033543,NM_001817	chr19,chr19	+,-	CEACAM21,CEACAM4	-49325,540
chr15:83680988-83681616	chr15	+	83681063	83681605	True	NR_027649,NM_031452,NR_027650,NM_001160114,NM_001160115,NM_001160116,NM_001160113,NM_144597	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,+,-,-,-,-,-,-	C15orf40,FAM103A1,C15orf40,C15orf40,C15orf40,C15orf40,C15orf40,C15orf40	-670,-26119,-670,-670,-670,-670,-670,-670
chr4:1243699-1244022	chr4	+	1243871	1243977	True	NM_001012614,NR_033339,NM_001328	chr4,chr4,chr4	-,+,-	CTBP1,C4orf42,CTBP1	-963,-694,-963
chr20:46755304-46756003	chr20	+	46755368	46755633	True	NR_026958,NM_198596	chr20,chr20	+,-	LOC284749,SULF2	233020,-340008
chr5:72247462-72247879	chr5	+	72247556	72247858	True	NM_001146032,NM_138782,NM_152625	chr5,chr5,chr5	+,+,-	FCHO2,FCHO2,ZNF366	3949,3949,-444307
chr4:151017005-151017264	chr4	+	151017019	151017301	True	NM_001199282,NR_036614	chr4,chr4	-,+	LRBA,DCLK2	919185,-17657
chr8:82600819-82601199	chr8	+	82600918	82601228	True	NM_152284,NM_005536,NM_001144879,NM_001144878,NM_001010893	chr8,chr8,chr8,chr8,chr8	+,-,-,-,-	CHMP4C,IMPA1,IMPA1,IMPA1,SLC10A5	43459,-2329,-2329,-2329,6037
chr11:68521014-68522447	chr11	+	68521039	68522476	True	NM_001039656,NM_015973,NM_004923	chr11,chr11,chr11	-,+,-	MTL5,GAL,MTL5	-2051,-69107,-2051
chr13:20439294-20440018	chr13	+	20439498	20440062	True	NM_001142684,NM_001039649,NM_003453,NM_001039650	chr13,chr13,chr13,chr13	-,-,+,-	ZMYM5,ZMYM5,ZMYM2,ZMYM5	-1722,-1722,92747,-1722
chr10:100995868-100996138	chr10	+	100995952	100996184	True	NM_021828,NM_001166246,NM_020348,NM_001166244,NM_001166245	chr10,chr10,chr10,chr10,chr10	-,-,+,-,-	HPSE2,HPSE2,CNNM1,HPSE2,HPSE2	-320,-320,92671,-320,-320
chr11:128773244-128773731	chr11	+	128773316	128773664	True	NM_000890,NM_145013	chr11,chr11	+,-	KCNJ5,C11orf45	-12054,1978
chr14:105887109-105887423	chr14	+	105887113	105887443	True	NM_004689,NM_001203258,NM_001519	chr14,chr14,chr14	+,+,-	MTA1,MTA1,BRF1	-978,-978,-119784
chr16:4423671-4424283	chr16	+	4423681	4424299	True	NM_016069,NM_138440	chr16,chr16	-,+	PAM16,VASN	-22308,-1884
chr16:641750-642383	chr16	+	641889	642247	True	NM_001172665,NM_001172664,NM_001172666,NM_001040160,NM_001172663,NM_021168	chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,-,+,+	RAB40C,RAB40C,RAB40C,C16orf13,RAB40C,RAB40C	-1869,-2277,-1869,44150,-2589,-1773
chr15:73348803-73349859	chr15	+	73348818	73349881	True	NM_001172623,NM_002499,NR_023319,NM_001172624	chr15,chr15,chr15,chr15	+,+,-,+	NEO1,NEO1,ADPGK,NEO1	-4053,-4053,-272692,-4053
chr2:219245410-219246068	chr2	+	219245479	219245593	True	NM_022152,NM_000578	chr2,chr2	-,+	TMBIM1,SLC11A1	-88199,1158
chr1:181452444-181452920	chr1	+	181452458	181452860	True	NM_005819,NM_000721	chr1,chr1	-,+	STX6,CACNA1E	-460412,9
chr6:37321252-37321697	chr6	+	37321292	37321677	True	NM_183078,NM_001162900,NM_003958	chr6,chr6,chr6	+,-,+	RNF8,TMEM217,RNF8	70,-95361,70
chr1:197888224-197888845	chr1	+	197888392	197888874	True	NM_001014434,NM_001195216,NM_020204	chr1,chr1,chr1	+,-,+	LHX9,DENND1B,LHX9	-6808,-143769,-1926
chr9:114287623-114287990	chr9	+	114287822	114288036	True	NM_001007169,NM_001080398,NM_133464	chr9,chr9,chr9	+,-,+	ZNF483,KIAA0368,ZNF483	-426,-40797,-426
chr16:89881271-89881603	chr16	+	89881386	89881454	True	NM_032451,NM_000135,NM_001018112	chr16,chr16,chr16	+,-,-	SPIRE2,FANCA,FANCA	13452,1667,1667
chr22:43737254-43738119	chr22	+	43737306	43738118	True	NM_173050,NM_001044370	chr22,chr22	-,+	SCUBE1,MPPED1	1287,69901
chr5:138776264-138776877	chr5	+	138776567	138776752	True	NM_001033112,NM_152686	chr5,chr5	+,-	PAIP2,DNAJC18	-98490,-1353
chr1:1404177-1404520	chr1	+	1404262	1404322	True	NR_026871,NM_031921	chr1,chr1	-,+	LOC441869,ATAD3B	-47612,2841
chr1:1404177-1404520	chr1	+	1445077	1445137	False	NM_001170536,NM_001170535,NM_018188,NM_001114748	chr1,chr1,chr1,chr1	+,+,+,-	ATAD3A,ATAD3A,ATAD3A,C1orf70	2772,2385,2385,30653
chr21:38826661-38827280	chr21	+	38826717	38827301	True	NM_006052,NM_001396	chr21,chr21	-,+	DSCR3,DYRK1A	-186884,-34178
chr16:67969340-67969748	chr16	+	67969390	67969758	True	NM_006742,NM_001907,NM_002801,NM_000229	chr16,chr16,chr16,chr16	+,-,-,-	PSKH1,CTRL,PSMB10,LCAT	-42266,-3612,1072,8307
chr11:44885692-44886578	chr11	+	44886131	44886579	True	NM_130783,NM_001076787	chr11,chr11	+,-	TSPAN18,TP53I11	-100206,86079
chr7:27780399-27780726	chr7	+	27780512	27780778	True	NM_006024,NM_152740,NM_001079864	chr7,chr7,chr7	+,-,+	TAX1BP1,HIBADH,TAX1BP1	-825,-77892,-825
chr1:209849322-209850337	chr1	+	209849485	209850274	True	NM_181755,NM_015714,NM_000228	chr1,chr1,chr1	+,+,-	HSD11B1,G0S2,LAMB3	9275,-866,-23665
chr1:226408530-226409336	chr1	+	226408573	226409231	True	NM_022735,NM_031944	chr1,chr1	-,+	ACBD3,MIXL1	-34150,2151
chr15:52954889-52956693	chr15	+	52955281	52956741	True	NM_002748,NM_019600	chr15,chr15	+,-	MAPK6,KIAA1370	-643922,14134
chr1:55505113-55505320	chr1	+	55505190	55505256	True	NM_014762,NM_174936	chr1,chr1	-,+	DHCR24,PCSK9	-152269,-92
chr21:34961615-34962407	chr21	+	34961759	34962310	True	NM_138927,NM_017613	chr21,chr21	+,-	SON,DONSON	-46467,-745
chr5:135472025-135472475	chr5	+	135472137	135472322	True	NM_001001420,NR_026763,NM_005903,NM_001001419	chr5,chr5,chr5,chr5	+,-,+,+	SMAD5,SMAD5OS,SMAD5,SMAD5	-3664,-1558,-3664,-3664
chr16:30133376-30133654	chr16	+	30133418	30133570	True	NM_002746,NM_001109891,NR_027081,NM_001040056,NM_024307	chr16,chr16,chr16,chr16,chr16	-,-,+,-,-	MAPK3,MAPK3,LOC100271831,MAPK3,GDPD3	1110,1110,-8036,1110,-8540
chr1:48379326-48380341	chr1	+	48379387	48380298	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	82314,308058
chr4:79489556-79490863	chr4	+	79489636	79490634	True	NM_005139,NM_001040202	chr4,chr4	+,-	ANXA3,PAQR3	-16945,369998
chr11:47196992-47197533	chr11	+	47197203	47197511	True	NM_032389,NM_000107,NM_001184975	chr11,chr11,chr11	-,+,-	ARFGAP2,DDB2,PACSIN3	958,38981,9971
chr4:54254795-54255287	chr4	+	54254817	54255325	True	NM_030917,NM_152540	chr4,chr4	+,-	FIP1L1,SCFD2	-11048,-22575
chr1:206222752-206223087	chr1	+	206222903	206223125	True	NM_000707,NM_001007544	chr1,chr1	+,-	AVPR1B,C1orf186	1157,65572
chr10:699359-700121	chr10	+	699424	700154	True	NR_027152,NR_027151,NM_014974	chr10,chr10,chr10	+,+,-	C10orf108,C10orf108,DIP2C	-3458,-3587,35504
chr4:113199088-113200913	chr4	+	113199200	113200397	True	NM_001102406,NM_052864	chr4,chr4	+,-	ALPK1,TIFA	18101,6712
chr19:57351703-57352009	chr19	+	57351763	57352017	True	NM_006210,NM_001146187,NM_001146326,NM_001146185,NM_001146184,NM_001146327,NR_024059,NM_015363	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,+,-	PEG3,PEG3,ZIM2,PEG3,PEG3,ZIM2,MIMT1,ZIM2	127,127,130,127,127,130,252,130
chr12:52604231-52604886	chr12	+	52604402	52604800	True	NM_182507,NR_027358	chr12,chr12	-,+	KRT80,LOC283404	-18618,73
chr11:16761111-16761504	chr11	+	16761110	16761545	True	NM_014267,NM_033326	chr11,chr11	+,-	C11orf58,SOX6	-1018,-263175
chr5:138608517-138609252	chr5	+	138608519	138609298	True	NR_003141,NR_002915,NR_036536,NR_036535,NM_022464,NM_199189,NM_001194954	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,-,+,+	SNHG4,SNORA74A,SNHG4,MATR3,SIL1,MATR3,MATR3	142,5170,142,142,-74454,142,142
chr16:1494338-1494757	chr16	+	1494420	1494778	True	NM_001143980,NM_016111	chr16,chr16	-,+	CCDC154,TELO2	-62,48573
chr22:36425175-36425384	chr22	+	36425315	36425397	True	NM_001082579,NM_001082578,NM_001136540	chr22,chr22,chr22	-,-,+	RBFOX2,RBFOX2,APOL1	-730,-730,223719
chr5:124216839-124217198	chr5	+	124216902	124217246	True	NM_004384,NM_020747	chr5,chr5	+,-	CSNK1G3,ZNF608	-1369160,-136097
chr8:74786589-74787516	chr8	+	74786722	74787531	True	NM_001001481,NM_018299,NM_001040613	chr8,chr8,chr8	-,-,+	UBE2W,UBE2W,TMEM70	3629,3629,100845
chr12:103350477-103351137	chr12	+	103350563	103351105	True	NM_000277,NM_004316	chr12,chr12	-,+	PAH,ASCL1	-39182,346
chr2:232793854-232794969	chr2	+	232793869	232794732	True	NM_024409,NM_152383	chr2,chr2	-,+	NPPC,DIS3L2	-2910,31560
chr17:28655904-28657207	chr17	+	28656067	28657188	True	NM_206832,NM_001304	chr17,chr17	-,+	TMIGD1,CPD	3931,48753
chr1:78704339-78704654	chr1	+	78704370	78704555	True	NR_027310,NM_003902	chr1,chr1	+,-	MGC27382,FUBP1	-9142,-259593
chr19:6669416-6669847	chr19	+	6669560	6669896	True	NM_003807,NM_172014,NM_004240	chr19,chr19,chr19	-,-,+	TNFSF14,TNFSF14,TRIP10	753,753,69810
chr2:220281434-220282460	chr2	+	220281582	220282412	True	NM_012100,NM_001927	chr2,chr2	-,+	DNPEP,DES	-28920,686
chr15:82949668-82951585	chr15	+	82950178	82951398	True	NR_026811,NR_033936,NR_033579	chr15,chr15,chr15	+,+,-	LOC80154,LOC727849,LOC440297	-5415,-5444,35081
chr15:82949668-82951585	chr15	-	83165070	83165774	False	NR_026811,NR_033579	chr15,chr15	-,+	LOC80154,LOC440297	17181,-35090
chr15:82949668-82951585	chr15	-	84892285	84893505	False	NR_027001,NR_033738	chr15,chr15	-,+	LOC388152,LOC440300	5473,-31738
chr15:82949668-82951585	chr15	-	85771391	85772611	False	NM_006738,NM_014300	chr15,chr15	+,-	AKAP13,SEC11A	151259,-511717
chr2:228339069-228339849	chr2	+	228339077	228339793	True	NM_024795,NM_001135187,NM_001135189,NM_001135188,NM_004504	chr2,chr2,chr2,chr2,chr2	-,+,+,+,+	TM4SF20,AGFG1,AGFG1,AGFG1,AGFG1	-95055,-2252,-2252,-2252,-2252
chr17:80190949-80192009	chr17	+	80191217	80192066	True	NM_001042423,NM_001042422,NM_004207,NM_198082	chr17,chr17,chr17,chr17	+,+,+,-	SLC16A3,SLC16A3,SLC16A3,CCDC57	-1124,-4975,-4379,-20528
chr6:147829713-147830053	chr6	+	147829855	147830100	True	NM_001030060,NR_034115	chr6,chr6	+,-	SAMD5,LOC729178	-78,-304105
chr8:52703835-52704205	chr8	+	52703877	52704230	True	NM_144651,NM_005285	chr8,chr8	-,+	PXDNL,NPBWR1	17826,1148237
chr11:60150072-60151171	chr11	+	60150156	60150930	True	NM_021201,NM_206939,NM_206938,NM_206940,NM_022349	chr11,chr11,chr11,chr11,chr11	+,+,+,+,-	MS4A7,MS4A7,MS4A7,MS4A7,MS4A6A	-4249,-4249,-4249,-4249,-199482
chr1:165180561-165181178	chr1	+	165180644	165181176	True	NM_001174069,NM_001005214	chr1,chr1	-,+	LMX1A,LRRC52	144352,332301
chr19:36135098-36135355	chr19	+	36135186	36135346	True	NM_000704,NM_001863,NM_014209	chr19,chr19,chr19	-,+,+	ATP4A,COX6B1,ETV2	-80626,3778,-2590
chr9:139973488-139973929	chr9	+	139973494	139973914	True	NM_207309,NM_178448,NM_016219,NR_027447	chr9,chr9,chr9,chr9	+,-,+,-	UAP1L1,C9orf140,MAN1B1,LOC100289341	-1592,-8466,7502,7405
chr14:23296062-23297032	chr14	+	23296300	23296703	True	NM_004995,NM_181304,NM_181305,NM_181306,NM_181307,NM_180982,NM_001126106,NM_178336	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,+,+,+,-,+	MMP14,MRPL52,MRPL52,MRPL52,MRPL52,MRPL52,SLC7A7,MRPL52	9089,2388,2388,2388,2388,2388,-7286,2388
chr2:239754569-239754979	chr2	+	239754609	239754955	True	NR_034162,NM_057179	chr2,chr2	-,+	FLJ43879,TWIST2	93060,1717
chr13:40281356-40281726	chr13	+	40281553	40281775	True	NM_001145079,NR_036190	chr13,chr13	+,-	COG6,MIR4305	-51848,-43281
chr2:162360208-162360809	chr2	+	162360211	162360773	True	NM_006593,NM_001935	chr2,chr2	+,-	TBR1,DPP4	-87643,570329
chr2:162360208-162360809	chr1	+	247024497	247025402	False	NR_015422,NM_015446	chr1,chr1	+,-	LOC149134,AHCTF1	-71629,69374
chr1:175885108-175887096	chr1	+	175885107	175886801	True	NM_021936,NR_002998	chr1,chr1	+,-	PAPPA2,SCARNA3	545505,50935
chr6:134273497-134273723	chr6	+	134273562	134273772	True	NM_004865,NM_145176	chr6,chr6	+,-	TBPL1,SLC2A12	528,100067
chr22:47160099-47161775	chr22	+	47160102	47161251	True	NM_022766,NM_014346	chr22,chr22	-,+	CERK,TBC1D22A	-25950,-1635
chr2:202692542-202694131	chr2	+	202692634	202694155	True	NM_001135745,NM_139158	chr2,chr2	-,+	ALS2,CDK15	-46739,-21501
chr22:30991809-30992809	chr22	+	30991808	30992688	True	NM_000355,NM_014303	chr22,chr22	+,-	TCN2,PES1	10381,-3914
chrX:118926062-118927137	chrX	+	118926193	118926951	True	NM_001000,NR_002584,NM_001105576	chrX,chrX,chrX	-,-,+	RPL39,SNORA69,ANKRD58	-587,-4746,-33668
chr15:72695880-72696999	chr15	+	72695883	72696935	True	NM_001080462,NM_000520	chr15,chr15	+,-	TMEM202,HEXA	-5275,-27363
chr18:18824746-18825769	chr18	+	18824772	18825236	True	NM_005406,NM_001142966	chr18,chr18	-,+	ROCK1,GREB1L	-132960,-2620
chr2:21265319-21266322	chr2	+	21265360	21266107	True	NM_182828,NM_000384	chr2,chr2	+,-	GDF7,APOB	-398987,888
chr10:99345866-99347506	chr10	+	99345932	99347244	True	NM_001009997,NM_178832,NM_001134670,NM_138413	chr10,chr10,chr10,chr10	+,-,+,+	C10orf62,MORN4,HOGA1,HOGA1	2205,46158,-1881,-1881
chr12:4647501-4647895	chr12	+	4647515	4647873	True	NM_006479,NM_001130862,NM_020374	chr12,chr12,chr12	+,+,-	RAD51AP1,RAD51AP1,C12orf4	76,76,-8
chr21:22369603-22370219	chr21	+	22369609	22370001	True	NM_004540,NR_024090	chr21,chr21	+,-	NCAM2,C21orf131	631,-194183
chr17:204078-204824	chr17	+	204281	204815	True	NM_001190412,NM_001190413,NM_001190411,NM_001013672,NM_006987	chr17,chr17,chr17,chr17,chr17	-,-,-,+,-	RPH3AL,RPH3AL,RPH3AL,C17orf97,RPH3AL	-1648,-1648,-1648,55302,-1648
chr5:92908188-92908405	chr5	+	92908232	92908384	True	NR_021490,NR_021491,NR_015369,NM_005654	chr5,chr5,chr5,chr5	-,-,-,+	FLJ42709,FLJ42709,FLJ42709,NR2F1	8669,8619,-1733,10658
chr16:30020837-30021429	chr16	+	30020840	30021334	True	NM_001109659,NM_003586,NM_173618	chr16,chr16,chr16	+,-,+	C16orf92,DOC2A,INO80E	13320,1117,-13360
chr14:54422008-54422409	chr14	+	54422088	54422375	True	NM_130850,NM_001202,NM_130851,NM_001130851	chr14,chr14,chr14,chr14	-,-,-,+	BMP4,BMP4,BMP4,CDKN3	1229,1229,-818,441297
chr22:50219739-50219993	chr22	+	50219771	50219981	True	NM_014838,NM_014577	chr22,chr22	+,-	ZBED4,BRD1	27515,-1319
chr17:66190348-66192335	chr17	+	66190489	66191831	True	NR_027283,NM_001174166	chr17,chr17	+,-	LOC440461,SLC16A6	2969,95624
chr9:133972623-133973650	chr9	+	133972796	133973574	True	NM_001185095,NM_001185096,NM_031426,NM_001145106,NR_033701	chr9,chr9,chr9,chr9,chr9	+,+,+,-,+	AIF1L,AIF1L,AIF1L,FIBCD1,AIF1L	-984,-984,-984,-158341,-984
chr19:19638328-19638586	chr19	+	19638510	19638602	True	NM_032037,NM_001190328,NM_198537	chr19,chr19,chr19	-,+,+	TSSK6,YJEFN3,YJEFN3	-12041,1067,1067
chr19:51628898-51629144	chr19	+	51629088	51629150	True	NM_145232,NM_001198558,NM_014441	chr19,chr19,chr19	-,+,+	CTU1,SIGLEC9,SIGLEC9	-17441,-1002,-1002
chr2:66661948-66662244	chr2	+	66662027	66662273	True	NM_181784,NM_002398	chr2,chr2	-,+	SPRED2,MEIS1	-1002371,258
chr21:44741036-44741236	chr21	+	44741049	44741153	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	128750,105899
chr9:95219652-95221194	chr9	+	95219692	95221069	True	NM_001193335,NM_001012267	chr9,chr9	-,+	ASPN,CENPP	23825,-132010
chr7:129851156-129852419	chr7	+	129851286	129852289	True	NM_145268,NM_032842	chr7,chr7	+,-	C7orf45,TMEM209	-3633,-5948
chr7:75933499-75933777	chr7	+	75933579	75933775	True	NM_012479,NM_001540	chr7,chr7	-,+	YWHAG,HSPB1	54617,-1755
chr3:49313570-49314007	chr3	+	49313596	49313980	True	NM_198562,NR_036233	chr3,chr3	-,+	C3orf62,MIR4271	578,-2101
chrX:30586209-30587849	chrX	+	30586465	30587820	True	NM_000167,NM_025159	chrX,chrX	+,-	GK,CXorf21	83655,8263
chr10:72971215-72971809	chr10	+	72971295	72971842	True	NM_000281,NM_170744	chr10,chr10	-,+	PCBD1,UNC5B	-322754,455
chr1:154839907-154840394	chr1	+	154839978	154840296	True	NM_001826,NM_001204087,NM_002249,NM_170782	chr1,chr1,chr1,chr1	+,-,-,-	CKS1B,KCNN3,KCNN3,KCNN3	106821,2508,2508,-7640
chr19:38861682-38863038	chr19	+	38861977	38862785	True	NM_152657,NM_002812	chr19,chr19	-,+	GGN,PSMD8	15933,2404
chr7:117196209-117196664	chr7	+	117196449	117196571	True	NR_023315,NM_000492	chr7,chr7	-,+	ASZ1,CFTR	-128872,-76487
chr10:105038331-105038738	chr10	+	105038431	105038761	True	NM_032727,NM_001011663	chr10,chr10	+,-	INA,PCGF6	-1562,72180
chr1:153928404-153930365	chr1	+	153928447	153930191	True	NM_130898,NM_181715,NM_014856	chr1,chr1,chr1	+,-,-	CREB3L4,CRTC2,DENND4B	10205,991,-9293
chr5:172574129-172575701	chr5	+	172574445	172575702	True	NM_001166175,NM_001205,NM_013980,NM_013979,NM_013978	chr5,chr5,chr5,chr5,chr5	-,+,+,+,+	NKX2-5,BNIP1,BNIP1,BNIP1,BNIP1	86670,-3051,-3051,-3051,-3051
chr4:54964848-54965741	chr4	+	54965006	54965720	True	NM_133267,NM_012110	chr4,chr4	+,-	GSX2,CHIC2	527,-34218
chrX:148622824-148623078	chrX	+	148622988	148623060	True	NM_001171909,NM_001171907,NM_178124,NM_001171908,NR_027455	chrX,chrX,chrX,chrX,chrX	+,+,+,+,-	CXorf40A,CXorf40A,CXorf40A,CXorf40A,LOC100131434	3005,-520,-520,-520,-1676
chr11:64725259-64725480	chr11	+	64725310	64725380	True	NM_001037225,NM_006244	chr11,chr11	-,+	C11orf85,PPP2R5B	2287,-33230
chr5:134984639-134985136	chr5	+	134984760	134985136	True	NM_145282,NR_027127	chr5,chr5	+,-	SLC25A48,LOC340074	185228,4538
chr15:37389120-37389362	chr15	+	37389120	37389402	True	NM_170674,NM_170675,NM_170676,NM_170677,NM_172315,NM_172316,NM_002399,NM_032499	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,-,-,-,-,-,+	MEIS2,MEIS2,MEIS2,MEIS2,MEIS2,MEIS2,MEIS2,C15orf41	3352,3352,3352,3352,1151,2245,4148,-456367
chr4:6204221-6204837	chr4	+	6204347	6204667	True	NM_001099433,NR_037863,NM_144720	chr4,chr4,chr4	-,+,-	JAKMIP1,LOC285484,JAKMIP1	-2029,-1939,-2029
chr1:162038830-162039238	chr1	+	162038831	162039264	True	NM_014697,NM_001164757,NM_015441	chr1,chr1,chr1	+,+,-	NOS1AP,NOS1AP,OLFML2B	316,316,-45187
chr8:6800516-6800828	chr8	+	6800583	6800877	True	NM_018361,NM_001925	chr8,chr8	+,-	AGPAT5,DEFA4	-234756,-4797
chr19:52953241-52954496	chr19	+	52953360	52954545	True	NM_001099694,NM_001105549	chr19,chr19	+,-	ZNF578,ZNF83	2283,187149
chr12:95396071-95397409	chr12	+	95396664	95397426	True	NR_036685,NM_018838	chr12,chr12	+,-	KRT19P2,NDUFA12	-168487,135
chr2:48542557-48542785	chr2	+	48542602	48542824	True	NM_001190274,NM_002158	chr2,chr2	-,+	FBXO11,FOXN2	-409670,-858
chr2:24344062-24345056	chr2	+	24344090	24344638	True	NM_001145710,NM_199346	chr2,chr2	+,-	LOC375190,PFN4	1711,1563
chr16:56966839-56967136	chr16	+	56966911	56967181	True	NM_001010990,NM_001010989,NM_014685,NM_024946	chr16,chr16,chr16,chr16	+,+,+,-	HERPUD1,HERPUD1,HERPUD1,FAM192A	-1214,-1214,-1214,252845
chr9:39464693-39465584	chr9	+	39464709	39465332	True	NM_001040065,NR_003528	chr9,chr9	+,-	FAM75A2,LOC653501	-109061,-183
chr9:39464693-39465584	chr9	+	40792418	40792926	False	NR_026801,NM_033160	chr9,chr9	+,-	FAM74A3,ZNF658	-76951,-306
chr9:39464693-39465584	chr9	+	41609727	41610351	False	NM_001113541,NR_003528	chr9,chr9	+,-	FAM75A5,LOC653501	-109099,-183
chr14:54987289-54988101	chr14	+	54987362	54987908	True	NM_004124,NM_006568	chr14,chr14	-,+	GMFB,CGRRF1	-31618,-10837
chr3:128968666-128969925	chr3	+	128968859	128969714	True	NM_003418,NM_016128,NM_006026	chr3,chr3,chr3	-,+,-	CNBP,COPG,H1FX	-66049,-457,65457
chr22:19710710-19710914	chr22	+	19710736	19710868	True	NM_024627,NM_001009939,NM_002688,NR_037611,NR_037612,NM_000407	chr22,chr22,chr22,chr22,chr22,chr22	-,+,+,+,+,+	C22orf29,SEPT5,SEPT5,SEPT5-GP1BB,SEPT5-GP1BB,GP1BB	131553,-4829,-8800,-6044,-4795,197
chr1:41951381-41952545	chr1	+	41951447	41952524	True	NM_001956,NR_037868	chr1,chr1	-,+	EDN2,LOC100507178	-1103,-471236
chr11:57473890-57474592	chr11	+	57473908	57474400	True	NM_153450,NM_015959,NM_001144012,NR_037646,NR_037645,NR_026593	chr11,chr11,chr11,chr11,chr11,chr11	-,+,+,+,+,+	MED19,TMX2,TMX2,TMX2-CTNND1,TMX2,TMX2	5332,5594,5594,5594,5594,5594
chr14:100770215-100771087	chr14	+	100770260	100771130	True	NM_001039355,NR_029906	chr14,chr14	-,+	SLC25A29,MIR345	1780,3065
chr5:159799578-159799784	chr5	+	159799629	159799695	True	NM_031908,NM_004219	chr5,chr5	-,+	C1QTNF2,PTTG1	-1981,49169
chr5:6866880-6867587	chr5	+	6866889	6867515	True	NM_001171806,NR_036242	chr5,chr5	+,-	PAPD7,MIR4278	-120839,-38855
chr12:54330729-54330954	chr12	+	54330787	54330985	True	NM_017410,NR_003716	chr12,chr12	+,-	HOXC13,HOTAIR	1590,31580
chr2:95692542-95692796	chr2	+	95692556	95692846	True	NR_037597,NM_022440,NM_022438,NM_002371,NM_022439	chr2,chr2,chr2,chr2,chr2	-,+,+,+,+	LOC442028,MAL,MAL,MAL,MAL	-79469,-1128,-1128,-1128,-1128
chr10:28823000-28824557	chr10	+	28823034	28824588	True	NM_016628,NR_033805,NR_024557,NM_100486	chr10,chr10,chr10,chr10	+,-,+,+	WAC,LOC220906,WAC,WAC	-661,-1751,-1658,-661
chr6:10418326-10418862	chr6	+	10418334	10418773	True	NM_001032280,NM_003220,NM_001042425,NR_033910	chr6,chr6,chr6,chr6	-,-,-,+	TFAP2A,TFAP2A,TFAP2A,LOC100130275	-5727,-2864,1074,-5836
chr10:74656872-74657757	chr10	+	74657152	74657782	True	NM_152635,NM_032562	chr10,chr10	+,-	OIT3,PLA2G12B	-3877,56778
chr17:74100945-74101432	chr17	+	74100981	74101335	True	NM_001013839,NM_015219,NM_001145297,NM_180990,NM_001145299,NM_001145298,NR_028133	chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,+,-,-,-	EXOC7,EXOC7,EXOC7,ZACN,EXOC7,EXOC7,EXOC7	-1113,-1113,-1113,-25769,-1113,-1113,-1329
chr2:86965521-86966319	chr2	+	86965720	86966306	True	NM_022780,NM_001198954	chr2,chr2	+,-	RMND5A,RNF103-VPS24	-18364,-17475
chr2:86965521-86966319	chr2	-	87284667	87285253	False	NR_026846,NM_001024457	chr2,chr2	-,+	LOC285074,RGPD1	18340,-139980
chr14:20803678-20804783	chr14	+	20803978	20804828	True	NM_182851,NM_182852,NM_001042618,NR_002312,NM_182849,NR_003693,NM_005484,NM_021178	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	-,-,+,-,-,-,+,-	CCNB1IP1,CCNB1IP1,PARP2,RPPH1,CCNB1IP1,SNORD126,PARP2,CCNB1IP1	-6442,-6445,6944,6792,-2521,-9280,6944,-2521
chr20:31591846-31592071	chr20	+	31591861	31592009	True	NM_025227,NM_080675	chr20,chr20	+,-	BPIL1,SUN5	3397,280
chr5:1801803-1802205	chr5	+	1801917	1802114	True	NM_032479,NM_004553	chr5,chr5	-,+	MRPL36,NDUFS6	-1961,-472
chr7:1129642-1130048	chr7	+	1129769	1129841	True	NM_001098201,NM_001134395,NM_001505,NM_001039966	chr7,chr7,chr7,chr7	+,-,+,+	GPER,C7orf50,GPER,GPER	-2100,48102,-3380,-3380
chr12:68044149-68044711	chr12	+	68044222	68044722	True	NM_003583,NM_000619,NM_006482	chr12,chr12,chr12	+,-,+	DYRK2,IFNG,DYRK2	-1768,508849,-1768
chr12:7012125-7013861	chr12	+	7012475	7013897	True	NM_032641,NM_201650,NM_006992,NM_001135217,NM_001975	chr12,chr12,chr12,chr12,chr12	-,+,+,+,+	SPSB2,LRRC23,LRRC23,LRRC23,ENO2	-29954,-1,-1,-1,9716
chr17:19549867-19551134	chr17	+	19549947	19551120	True	NM_001099646,NM_000382,NM_001031806	chr17,chr17,chr17	-,+,+	SLC47A2,ALDH3A2,ALDH3A2	68973,943,943
chrX:111325231-111325918	chrX	+	111325336	111325700	True	NM_012471,NM_001004308	chrX,chrX	-,+	TRPC5,ZCCHC16	354,552
chr17:72986027-72986323	chr17	+	72986102	72986276	True	NM_014603,NM_030630	chr17,chr17	+,-	CDR2L,C17orf28	-2426,-17202
chr16:49432466-49433163	chr16	+	49432476	49433192	True	NM_144602,NM_004352	chr16,chr16	+,-	C16orf78,CBLN1	-24720,-116734
chrX:9979455-9980260	chrX	+	9979495	9980253	True	NM_015691,NM_000273	chrX,chrX	+,-	WWC3,GPR143	3541,-245490
chr16:85831556-85831886	chr16	+	85831556	85831724	True	NM_001142288,NM_001861,NM_006067	chr16,chr16,chr16	-,+,-	COX4NB,COX4I1,COX4NB	1482,1448,1482
chr4:110360749-110362678	chr4	+	110360951	110362462	True	NM_032518,NM_001042734,NM_006323	chr4,chr4,chr4	-,+,+	COL25A1,SEC24B,SEC24B	-137152,-6035,-6035
chr20:45528218-45529076	chr20	+	45528224	45529108	True	NM_005244,NM_172110,NM_033550	chr20,chr20,chr20	+,+,-	EYA2,EYA2,TP53RK	-5012,-5012,-209948
chrX:104464071-104464380	chrX	+	104464095	104464173	True	NM_031274,NM_198465	chrX,chrX	-,+	TEX13A,NRK	1235,602362
chr8:120629447-120629908	chr8	+	120629457	120629889	True	NM_002514,NM_001040092	chr8,chr8	+,-	NOV,ENPP2	-200956,21277
chr12:4431321-4432592	chr12	+	4431471	4432619	True	NM_020638,NM_020375	chr12,chr12	-,+	FGF23,C12orf5	56330,-1163
chr13:111590040-111590303	chr13	+	111590060	111590321	True	NM_017664,NM_001113511	chr13,chr13	-,+	ANKRD10,ARHGEF7	-22644,177302
chr1:153957054-153958526	chr1	+	153957162	153958238	True	NM_002870,NM_006694,NM_001030	chr1,chr1,chr1	-,-,+	RAB13,JTB,RPS27	618,-6711,5000
chr1:209941644-209941995	chr1	+	209941721	209942031	True	NM_152485,NM_025228	chr1,chr1	-,+	C1orf74,TRAF3IP3	15909,-12387
chr22:30280009-30280597	chr22	+	30280008	30280346	True	NM_021090,NM_153051,NM_153050,NM_032204	chr22,chr22,chr22,chr22	+,+,+,-	MTMR3,MTMR3,MTMR3,ASCC2	-908,-908,-908,-45754
chr11:113788148-113789791	chr11	+	113788621	113789733	True	NM_020886,NM_006028	chr11,chr11	-,+	USP28,HTR3B	-42365,-13094
chr21:38445994-38446911	chr21	+	38446259	38446955	True	NM_003316,NM_153681,NM_153682,NR_028352,NM_001001894	chr21,chr21,chr21,chr21,chr21	+,-,-,-,+	TTC3,PIGP,PIGP,PIGP,TTC3	8291,-1156,-801,-801,-739
chr20:31348319-31349671	chr20	+	31348550	31349532	True	NM_006892,NM_175848,NM_175849,NM_053041	chr20,chr20,chr20,chr20	+,+,+,-	DNMT3B,DNMT3B,DNMT3B,COMMD7	658,658,658,-16736
chr2:216301570-216301822	chr2	+	216301662	216301802	True	NM_004044,NM_002026,NM_054034,NM_212476,NM_212474,NM_212482,NM_212478	chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-,-	ATIC,FN1,FN1,FN1,FN1,FN1,FN1	-125034,-871,-871,-871,-871,-871,-871
chr12:53400233-53400705	chr12	+	53400382	53400712	True	NM_001417,NR_033854	chr12,chr12	+,-	EIF4B,LOC283335	-371,47560
chr13:41242803-41243258	chr13	+	41242811	41243175	True	NM_002015,NM_014252	chr13,chr13	-,+	FOXO1,SLC25A15	-2077,120371
chr5:55142993-55144523	chr5	+	55143515	55144379	True	NM_139017,NM_173514	chr5,chr5	+,-	IL31RA,SLC38A9	2954,-135352
chr17:38120477-38121837	chr17	+	38121029	38121825	True	NM_178171,NM_139280	chr17,chr17	+,-	GSDMA,ORMDL3	-1854,-37145
chr20:57088244-57088695	chr20	+	57088376	57088672	True	NM_153360,NR_034147	chr20,chr20	-,+	APCDD1L,LOC149773	1327,1762
chr12:122654185-122654898	chr12	+	122654635	122654868	True	NM_152759,NM_001014336	chr12,chr12	+,-	LRRC43,IL31	-2426,3935
chr11:71899964-71900174	chr11	+	71899975	71900181	True	NM_016725,NM_016724,NM_005169,NM_016729,NM_000802	chr11,chr11,chr11,chr11,chr11	+,+,-,+,+	FOLR1,FOLR1,PHOX2A,FOLR1,FOLR1	420,420,55089,2991,777
chr15:52478447-52480068	chr15	+	52478613	52479783	True	NM_006578,NM_016194,NM_002748	chr15,chr15,chr15	-,-,+	GNB5,GNB5,MAPK6	-6451,3842,-167253
chrX:21874374-21874647	chrX	+	21874557	21874683	True	NM_014332,NM_206923	chrX,chrX	-,+	SMPX,YY2	-98327,-503
chr6:166797072-166797411	chr6	+	166797149	166797415	True	NM_016098,NR_027284	chr6,chr6	-,+	BRP44L,LOC441177	-663,-396161
chr20:62325966-62326353	chr20	+	62326206	62326280	True	NM_001134758,NM_003823	chr20,chr20	-,+	ARFRP1,TNFRSF6B	13125,1723
chr22:45556997-45558764	chr22	+	45557231	45558721	True	NM_007172,NR_031651,NM_153645	chr22,chr22,chr22	+,-,+	NUP50,MIR1249,NUP50	1004,38229,1830
chr2:69610916-69611569	chr2	+	69611123	69611590	True	NM_002056,NR_036073	chr2,chr2	-,+	GFPT1,MIR3126	2843,-280369
chr17:20490613-20492141	chr17	+	20490888	20492156	True	NM_001190790,NR_029393	chr17,chr17	+,-	CDRT15L2,KRT16P3	-7908,-83077
chr17:20490613-20492141	chr17	+	15675871	15676127	False	NM_006470,NR_033865	chr17,chr17	-,+	TRIM16,CDRT15L1	-89678,-7911
chr17:20490613-20492141	chr17	+	15689221	15689495	False	NM_006470,NR_002211	chr17,chr17	-,+	TRIM16,MEIS3P1	-103028,668
chr10:127264628-127264842	chr10	+	127264734	127264888	True	NR_023362,NM_001128202	chr10,chr10	+,-	LOC100169752,C10orf122	-1845,106875
chr19:52489328-52489888	chr19	+	52489542	52489808	True	NM_024840,NM_021632	chr19,chr19	+,-	ZNF613,ZNF350	-58905,321
chr1:145507491-145507840	chr1	+	145507519	145507867	True	NR_002328,NM_005105,NM_003846,NM_001184795	chr1,chr1,chr1,chr1	-,+,+,+	GNRHR2,RBM8A,PEX11B,PEX11B	8259,-13,8297,8692
chr10:33626172-33626394	chr10	+	33626223	33626437	True	NM_001024629,NM_001024628,NM_024688,NM_003873	chr10,chr10,chr10,chr10	-,-,+,-	NRP1,NRP1,C10orf68,NRP1	-2390,-2390,-769624,-2390
chrX:152239491-152239810	chrX	+	152239576	152239808	True	NM_032882,NM_001170944	chrX,chrX	+,+	PNMA6A,LOC100287428	1030,1010
chrX:152239491-152239810	chrX	-	152246988	152247220	False	NM_032882,NM_001170944	chrX,chrX	-,+	PNMA6A,LOC100287428	-1030,-6220
chrX:152239491-152239810	chrX	+	152337038	152337270	False	NM_032882	chrX	-	PNMA6A	-91080
chrX:152239491-152239810	chrX	-	152344450	152344682	False	NM_032882	chrX	-	PNMA6A	-98492
chr16:67965077-67965470	chr16	+	67965082	67965454	True	NM_006742,NM_001907,NM_002801	chr16,chr16,chr16	+,-,-	PSKH1,CTRL,PSMB10	-37958,374,5376
chr3:129410481-129411776	chr3	+	129410700	129411582	True	NM_153833,NR_033361	chr3,chr3	+,-	H1FOO,TMCC1	-148702,-3125
chr2:158454172-158454381	chr2	+	158454270	158454420	True	NM_014568,NM_001111031	chr2,chr2	+,-	GALNT5,ACVR1C	-339995,-198
chr12:130531201-130531705	chr12	+	130531516	130531710	True	NR_024457,NM_007197	chr12,chr12	-,+	LOC100190940,FZD10	-4629,115293
chr4:47452639-47453954	chr4	+	47452638	47453972	True	NM_020453,NM_017845	chr4,chr4	+,-	ATP10D,COMMD8	33437,11754
chr15:59665571-59666158	chr15	+	59665638	59666031	True	NM_152450,NM_004998	chr15,chr15	+,-	FAM81A,MYO1E	64340,-567
chr2:136287688-136287943	chr2	+	136287805	136287941	True	NM_015361,NM_032143	chr2,chr2	+,-	R3HDM1,ZRANB3	1141,915
chr19:45972731-45972987	chr19	+	45972732	45973030	True	NM_001114171,NM_006732,NM_206901	chr19,chr19,chr19	+,+,-	FOSB,FOSB,RTN2	-1530,-1530,23494
chr3:190040386-190041213	chr3	+	190040423	190041131	True	NM_021101,NM_006580	chr3,chr3	-,+	CLDN1,CLDN16	-188,64529
chr7:97363078-97364796	chr7	+	97363103	97364834	True	NM_001178077,NM_013997,NM_013996,NM_003182,NM_013998	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	ASNS,TAC1,TAC1,TAC1,TAC1	136693,-1883,-1883,-1883,-1883
chr9:842841-843220	chr9	+	842887	843265	True	NM_021951,NM_152569	chr9,chr9	+,-	DMRT1,C9orf66	-1248,-626994
chr1:165664998-165665382	chr1	+	165665005	165665430	True	NM_000696,NR_036683	chr1,chr1	-,+	ALDH9A1,LOC440700	2520,2556
chr6:167620674-167621046	chr6	+	167620709	167620947	True	NM_005299,NM_001145121	chr6,chr6	-,+	GPR31,TCP10L2	-49390,-36679
chr7:72363655-72363977	chr7	+	72363686	72363851	True	NR_003666,NM_172020	chr7,chr7	-,+	SPDYE7P,POM121	-24031,-13801
chr7:72363655-72363977	chr7	-	75101550	75101606	False	NM_001099415,NM_001099435	chr7,chr7	-,+	POM121C,SPDYE5	14012,22692
chr3:1144712-1145042	chr3	+	1144855	1145057	True	NM_000564,NM_014461	chr3,chr3	-,+	IL5RA,CNTN6	2007057,-10285
chr19:1204057-1204844	chr19	+	1204305	1204663	True	NM_000455,NM_014963	chr19,chr19	+,-	STK11,SBNO2	1134,-30023
chr1:155990213-155990668	chr1	+	155990274	155990716	True	NM_014017,NM_003145	chr1,chr1	+,-	LAMTOR2,SSR2	33800,92
chr20:33458864-33459475	chr20	+	33459023	33459341	True	NM_178026,NM_018677,NM_001076552,NR_028046	chr20,chr20,chr20,chr20	-,+,+,+	GGT7,ACSS2,ACSS2,ACSS2	1370,4986,4986,3424
chr7:128001895-128002097	chr7	+	128001894	128002146	True	NM_001114726,NM_001098786,NM_001174164	chr7,chr7,chr7	-,+,-	PRRT4,C7orf68,PRRT4	-155,93737,-155
chr19:1025749-1026354	chr19	+	1026027	1026347	True	NM_004368,NM_033420,NM_001033026,NM_201277	chr19,chr19,chr19,chr19	+,-,-,+	CNN2,C19orf6,C19orf6,CNN2	-50,-4886,-4886,-50
chr17:16745894-16747276	chr17	+	16745903	16746307	True	NR_026810,NR_029392	chr17,chr17	+,-	FAM106C,KRT16P2	-53897,-9756
chr17:16745894-16747276	chr17	-	18333416	18333467	False	NM_148918,NR_001443	chr17,chr17	-,+	SHMT1,LOC339240	-66560,-7973
chr17:16745894-16747276	chr17	+	20417568	20417619	False	NM_001190790,NR_029393	chr17,chr17	+,-	CDRT15L2,KRT16P3	65417,-9757
chr15:65893972-65894500	chr15	+	65893983	65894282	True	NM_030800,NM_001136043,NM_004727	chr15,chr15,chr15	-,-,+	C15orf44,C15orf44,SLC24A1	9180,9242,19987
chr8:124664533-124664962	chr8	+	124664539	124664995	True	NM_001081675,NM_144963	chr8,chr8	-,+	KLHL38,FAM91A1	245,115886
chr3:186518039-186519666	chr3	+	186518038	186518978	True	NR_002588,NM_181573,NM_002916	chr3,chr3,chr3	+,-,-	SNORA4,RFC4,RFC4	-12694,5557,5363
chr14:24521841-24522072	chr14	+	24521898	24522070	True	NM_138360,NM_006177	chr14,chr14	+,-	LRRC16B,NRL	-743,31812
chr1:27248956-27249952	chr1	+	27249014	27249886	True	NM_021969,NM_006600	chr1,chr1	-,+	NR0B2,NUDC	-8447,-842
chr2:96010650-96010936	chr2	+	96010670	96010917	True	NM_001164464,NM_001034914	chr2,chr2	-,+	TRIM43B,KCNIP3	139615,1850
chr1:43750021-43751190	chr1	+	43750134	43750877	True	NM_182517,NM_001164829,NM_144626	chr1,chr1,chr1	-,-,+	C1orf210,C1orf210,TMEM125	426,464,-14520
chr1:154291476-154292649	chr1	+	154291698	154292452	True	NM_080429,NM_020452,NM_138740,NM_001005855	chr1,chr1,chr1,chr1	+,+,-,+	AQP10,ATP8B2,C1orf43,ATP8B2	1139,7823,-98425,5583
chr12:105260036-105260814	chr12	+	105260192	105260858	True	NM_152318,NM_032148	chr12,chr12	+,-	C12orf45,SLC41A2	119239,61671
chr3:50606079-50606501	chr3	+	50606235	50606367	True	NM_016173,NM_001171743,NM_016210,NM_001171741,NM_001171740	chr3,chr3,chr3,chr3,chr3	+,-,-,-,-	HEMK1,C3orf18,C3orf18,C3orf18,C3orf18	541,-1012,-1012,2141,-1012
chr5:90574263-90574769	chr5	+	90574444	90574546	True	NM_020801,NR_027435	chr5,chr5	-,+	ARRDC3,LOC100129716	104653,101617
chr17:53805835-53806379	chr17	+	53805855	53806423	True	NM_021213,NM_018286,NM_001099640	chr17,chr17,chr17	+,-,-	PCTP,TMEM100,TMEM100	21916,-5630,3109
chr16:24857664-24857956	chr16	+	24857663	24857929	True	NM_001006634,NM_052944	chr16,chr16	-,+	ARHGAP17,SLC5A11	168796,-162
chr15:69101428-69102088	chr15	+	69101530	69102104	True	NR_031680,NR_026808,NR_036197	chr15,chr15,chr15	+,-,-	MIR548H4,C15orf28,MIR4312	14198,-2090,-7266
chr21:34848990-34849585	chr21	+	34849133	34849331	True	NM_032195,NM_006134	chr21,chr21	+,-	SON,TMEM50B	66018,3000
chr5:138609926-138610137	chr5	+	138609962	138610158	True	NR_003141,NR_002915,NR_036536,NR_036535,NM_022464,NM_199189,NM_001194954	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,-,+,+	SNHG4,SNORA74A,SNHG4,MATR3,SIL1,MATR3,MATR3	-572,4310,-572,-572,-75897,-572,-572
chr19:49017643-49017856	chr19	+	49017690	49017806	True	NM_177973,NM_001080434	chr19,chr19	+,-	SULT2B1,LMTK3	37622,-1244
chr17:19435342-19435854	chr17	+	19435467	19435825	True	NM_002404,NM_018242	chr17,chr17	-,+	MFAP4,SLC47A1	-144935,1341
chr5:175814824-175815347	chr5	+	175814843	175815346	True	NM_016391,NM_138820	chr5,chr5	-,+	NOP16,HIGD2A	244,437
chr2:149632287-149632565	chr2	+	149632318	149632604	True	NM_015702,NM_004522	chr2,chr2	-,+	MMADHC,KIF5C	811776,214
chr14:94496920-94497174	chr14	+	94497075	94497222	True	NM_023112,NM_020414	chr14,chr14	+,-	OTUB2,DDX24	-4402,50386
chr19:48257388-48257674	chr19	+	48257539	48257619	True	NM_015710,NM_198479,NR_003048	chr19,chr19,chr19	+,-,+	GLTSCR2,TPRX1,SNORD23	-8797,49292,1490
chr20:56286419-56286669	chr20	+	56286477	56286661	True	NM_020182,NM_199169,NM_002591,NM_199170,NM_199171	chr20,chr20,chr20,chr20,chr20	-,-,+,-,-	PMEPA1,PMEPA1,PCK1,PMEPA1,PMEPA1	-1446,-852,-150391,-852,12
chrX:70944181-70945948	chrX	+	70944185	70945472	True	NR_034005,NM_001145140,NM_001145139,NR_001568	chrX,chrX,chrX,chrX	+,-,-,-	FLJ46446,CXorf49,CXorf49B,BCYRN1	-27190,-6050,-6050,3540
chrX:70944181-70945948	chrX	-	70975754	70977041	False	NR_001568,NM_001145140,NM_001145139	chrX,chrX,chrX	-,+,+	BCYRN1,CXorf49,CXorf49B	-26792,6098,6098
chr19:38861313-38861682	chr19	+	38861317	38861641	True	NM_152657,NM_002812	chr19,chr19	-,+	GGN,PSMD8	17077,3548
chr8:110381366-110382151	chr8	+	110381771	110382187	True	NM_177531,NM_032869	chr8,chr8	+,-	PKHD1L1,NUDCD1	-7130,-35421
chr16:31107687-31108398	chr16	+	31107701	31107944	True	NM_001122957,NM_024006,NM_206824,NM_001039503	chr16,chr16,chr16,chr16	+,-,-,-	BCKDK,VKORC1,VKORC1,PRSS53	11717,-1425,-1425,-7571
chr3:183147798-183148139	chr3	+	183148114	183148189	True	NM_015078,NM_032047	chr3,chr3	-,+	MCF2L2,B3GNT5	-2259,-177133
chr19:43832795-43833951	chr19	+	43833553	43833975	True	NR_026881,NM_002784	chr19,chr19	+,-	PRG1,PSG9	19232,-59871
chr8:66586701-66587439	chr8	+	66586909	66587135	True	NM_018120,NM_001145838	chr8,chr8	-,+	ARMC1,MTFR1	-40457,-4853
chr9:71392325-71393781	chr9	+	71392441	71393722	True	NM_002732,NM_138333	chr9,chr9	-,+	PRKACG,FAM122A	235368,1241
chr10:70981202-70981543	chr10	+	70981227	70981389	True	NM_001057,NM_025130	chr10,chr10	-,+	TACR2,HKDC1	195335,-1219
chr19:48895106-48896063	chr19	+	48895109	48895868	True	NM_006801,NM_000836	chr19,chr19	-,+	KDELR1,GRIN2D	-299,2263
chr6:30905856-30906625	chr6_qbl_hap6	+	2199007	2199565	False	NM_205854,NM_080870	chr6_qbl_hap6,chr6_qbl_hap6	-,+	SFTA2,DPCR1	-6084,2184
chr6:30905856-30906625	chr6_mcf_hap5	+	2287975	2288533	False	NM_205854,NM_080870	chr6_mcf_hap5,chr6_mcf_hap5	-,+	SFTA2,DPCR1	-6084,2184
chr6:30905856-30906625	chr6_cox_hap2	+	2417946	2418504	False	NM_205854,NM_080870	chr6_cox_hap2,chr6_cox_hap2	-,+	SFTA2,DPCR1	-6071,2185
chr6:30905856-30906625	chr6	+	30906035	30906593	True	NM_205854,NM_080870	chr6,chr6	-,+	SFTA2,DPCR1	-6083,2183
chr6:30905856-30906625	chr6_dbb_hap3	+	2200150	2200708	False	NM_205854,NM_080870	chr6_dbb_hap3,chr6_dbb_hap3	-,+	SFTA2,DPCR1	-6088,2184
chr1:27113558-27113987	chr1	+	27113565	27113725	True	NM_017837,NM_018066,NM_001202554	chr1,chr1,chr1	+,-,+	PIGV,GPN2,PIGV	728,103194,953
chr19:48052928-48053391	chr19	+	48052986	48053242	True	NM_015711,NM_001101419	chr19,chr19	+,-	GLTSCR1,ZNF541	58210,5927
chr18:61312316-61314064	chr18	+	61312658	61314027	True	NM_080475,NM_002974	chr18,chr18	+,-	SERPINB11,SERPINB4	56166,-1156
chr1:42384388-42385011	chr1	+	42384423	42384981	True	NM_024503,NM_007102,NM_001127714	chr1,chr1,chr1	-,+,-	HIVEP3,GUCA2B,HIVEP3	43,234110,43
chr12:72144641-72145627	chr12	+	72144761	72145656	True	NM_014999,NM_144982	chr12,chr12	+,-	RAB21,ZFC3H1	3001,-87012
chr1:201437767-201437997	chr1	+	201437792	201438046	True	NM_012396,NR_026667	chr1,chr1	-,+	PHLDA3,RPS10P7	303,50985
chr1:10460568-10461994	chr1	+	10460588	10461615	True	NM_004401,NM_002631	chr1,chr1	-,+	DFFA,PGD	71055,-1554
chr12:188093-189450	chr12	+	188220	189430	True	NM_015232,NR_026823	chr12,chr12	+,-	IQSEC3,FAM138D	-1729,-38808
chr12:113234777-113235260	chr12	+	113234856	113235295	True	NM_014954,NM_001143854,NM_001193521	chr12,chr12,chr12	+,+,-	RPH3A,RPH3A,RASAL1	-5365,-5365,338315
chr3:39140187-39141957	chr3	+	39140332	39141996	True	NM_031899,NM_145755,NM_001105513	chr3,chr3,chr3	-,+,+	GORASP1,TTC21A,TTC21A	7184,7155,7155
chr6:41707817-41708822	chr6	+	41707829	41708441	True	NM_001167827,NM_007162,NM_013397,NM_001166424,NM_002630	chr6,chr6,chr6,chr6,chr6	-,-,+,-,-	TFEB,TFEB,PRICKLE4,PGC,PGC	-3832,-5031,40058,6748,6748
chr1:114395719-114396264	chr1	+	114395842	114395927	True	NR_037864,NM_001193431	chr1,chr1	+,-	LOC100287722,PTPN22	3329,18511
chr7:27181980-27182373	chr7	+	27182051	27182340	True	NR_002795,NM_019102,NM_024014	chr7,chr7,chr7	+,-,-	HOXA11-AS1,HOXA5,HOXA6	42686,997,5078
chr4:25526589-25527196	chr4	+	25526590	25527232	True	NM_015187,NM_001177998	chr4,chr4	-,+	SEL1L3,SLC34A2	337428,130202
chr19:53141600-53141810	chr19	+	53141748	53141810	True	NM_001105551,NM_001105550,NM_001105553,NM_001105552,NM_001105554,NM_018300,NR_023311,NM_001105549	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,+,-	ZNF83,ZNF83,ZNF83,ZNF83,ZNF83,ZNF83,ZNF137P,ZNF83	-104,-104,-104,-104,-104,-104,-41862,-104
chr13:114059959-114060405	chr13	+	114060263	114060419	True	NM_024719,NM_017905	chr13,chr13	-,+	GRTP1,TMCO3	-41800,84888
chr15:66996770-66998227	chr15	+	66996799	66998082	True	NM_005585,NR_027654,NM_207338,NM_001142861	chr15,chr15,chr15,chr15	+,+,-,+	SMAD6,SMAD6,LCTL,SMAD6	-2176,-2176,-138964,2847
chr17:37378810-37379680	chr17	+	37378862	37379666	True	NM_198993,NM_000981	chr17,chr17	-,+	STAC2,RPL19	2424,-22377
chr17:73874730-73875230	chr17	+	73874852	73875125	True	NM_033452,NM_001080419	chr17,chr17	-,+	TRIM47,UNK	-196,-94222
chr19:29371904-29372549	chr19	+	29371956	29372526	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	83511,331660
chr16:68343756-68344128	chr16	+	68343769	68344107	True	NM_032178,NM_019023,NM_001184824	chr16,chr16,chr16	-,+,+	SLC7A6OS,PRMT7,PRMT7	813,769,769
chrX:110922894-110923553	chrX	+	110923136	110923358	True	NM_001168385,NR_033132,NM_018466,NR_033134,NR_033127,NM_001039210,NR_033125,NR_033124,NM_001099922,NR_033129,NR_033128,NM_178153,NR_033131	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,+,+,+,+,+,+,+,-,+	ALG13,ALG13,ALG13,ALG13,ALG13,ALG13,ALG13,ALG13,ALG13,ALG13,ALG13,DCX,ALG13	987,1526,987,1039,1039,987,987,987,987,1039,1039,-267676,1039
chr6:37464749-37465485	chr6	+	37464753	37465232	True	NM_015050,NM_138493	chr6,chr6	+,-	FTSJD2,C6orf129	-63897,2533
chr12:6991090-6992310	chr12	+	6991207	6992127	True	NM_032641,NR_033796,NM_001146316,NR_002803	chr12,chr12,chr12,chr12	-,+,-,+	SPSB2,DSTNP2,SPSB2,RPL13P5	-8686,1718,-8758,1017
chr10:16861348-16861698	chr10	+	16861359	16861717	True	NM_012425,NM_030664,NM_152724	chr10,chr10,chr10	-,+,-	RSU1,PTER,RSU1	-1906,-382454,-1906
chr11:298876-299106	chr11	+	298884	299078	True	NM_006435,NM_001025295,NM_025092	chr11,chr11,chr11	+,-,+	IFITM2,IFITM5,ATHL1	9028,498,-9797
chr16:88871661-88871894	chr16	+	88871690	88871940	True	NM_000485,NM_001030018,NM_030928	chr16,chr16,chr16	-,-,+	APRT,APRT,CDT1	6452,6452,-1555
chr17:21456582-21456903	chr17	+	21456832	21456897	True	NM_001113434,NM_001194958	chr17,chr17	-,+	C17orf51,KCNJ18	-1891,-148436
chr15:48414442-48414857	chr15	+	48414470	48414895	True	NM_205850,NM_016132	chr15,chr15	+,-	SLC24A5,MYEF2	-1360,55713
chr5:7394607-7394914	chr5	+	7394618	7394963	True	NR_033906,NM_020546	chr5,chr5	-,+	LOC442132,ADCY2	-87791,1379
chr3:125575857-125576725	chr3	+	125576610	125576737	True	NR_024250,NR_031687	chr3,chr3	+,-	LOC100125556,MIR548I1	58706,-67215
chr11:69200452-69200791	chr11	+	69200543	69200840	True	NM_153451,NM_138768	chr11,chr11	-,+	ORAOV1,MYEOV	289375,-138980
chr5:96270545-96270866	chr5	+	96270603	96270915	True	NM_001198541,NM_005575	chr5,chr5	-,+	ERAP1,LNPEP	-120755,430
chr2:178911908-178913902	chr2	+	178912348	178913937	True	NM_016953,NM_152945	chr2,chr2	-,+	PDE11A,RBM45	23595,63244
chr2:70056306-70056531	chr2	+	70056305	70056531	True	NM_178439,NM_152792	chr2,chr2	+,-	GMCL1,ASPRV1	286,132916
chrX:48931938-48933553	chrX	+	48932085	48933381	True	NM_007213,NM_001163323,NM_001029896	chrX,chrX,chrX	-,+,-	PRAF2,CCDC120,WDR45	-423,-15615,4233
chr13:113345700-113345942	chr13	+	113345884	113345986	True	NM_006322,NM_015205,NM_032189	chr13,chr13,chr13	-,+,+	TUBGCP3,ATP11A,ATP11A	-103403,-1292,-1292
chr3:155522637-155523745	chr3	+	155522643	155523729	True	NM_003875,NM_173657	chr3,chr3	+,-	GMPS,C3orf33	64595,376
chr8:143763739-143763955	chr8	+	143763800	143764000	True	NM_003724,NM_005672	chr8,chr8	-,+	JRK,PSCA	-12399,-1977
chr2:136281747-136283137	chr2	+	136281975	136283102	True	NM_015361,NM_032143	chr2,chr2	+,-	R3HDM1,ZRANB3	5980,5761
chr1:22352592-22352810	chr1	+	22352659	22352749	True	NR_023919,NR_023918,NM_005529	chr1,chr1,chr1	+,+,-	HSPC157,HSPC157,HSPG2	-675,-1010,-88909
chr11:92894299-92895565	chr11	+	92894629	92895441	True	NM_152313,NM_181645	chr11,chr11	-,+	SLC36A4,CCDC67	35708,168441
chr10:38485936-38487440	chr10	+	38486114	38487322	True	NR_027269,NR_024524	chr10,chr10	-,+	SEPT7L,LOC100129055	204522,-21568
chr20:46040518-46042151	chr20	+	46040804	46042184	True	NM_183048,NM_001174087	chr20,chr20	-,+	ZMYND8,NCOA3	-55330,88416
chr8:42947171-42947570	chr8	+	42947268	42947472	True	NR_027669,NM_032237	chr8,chr8	-,+	RNF170,SGK196	-195402,1184
chrX:118891495-118891741	chrX	+	118891559	118891789	True	NM_001105576,NR_002584	chrX,chrX	+,-	ANKRD58,SNORA69	786,29708
chr19:49223502-49224982	chr19	+	49223695	49224480	True	NM_001130915,NM_001097638,NM_182574	chr19,chr19,chr19	-,+,-	MAMSTR,FUT2,MAMSTR	-719,-24518,-3481
chr19:51457247-51457478	chr19	+	51457403	51457480	True	NM_001077492,NM_012427,NM_005551,NM_001077491	chr19,chr19,chr19,chr19	-,-,+,-	KLK5,KLK5,KLK2,KLK5	-1059,-1059,-80773,-1059
chr8:65490420-65490699	chr8	+	65490457	65490647	True	NM_152414,NR_015374	chr8,chr8	+,-	BHLHE22,LOC401463	2147,-637
chr19:3029728-3030367	chr19	+	3030092	3030316	True	NM_003260,NM_001144762,NM_024760	chr19,chr19,chr19	-,-,+	TLE2,TLE2,TLE6	-927,-480,-52607
chr4:111120389-111120881	chr4	+	111120431	111120858	True	NM_001130721,NM_024090,NM_001977	chr4,chr4,chr4	-,-,+	ELOVL6,ELOVL6,ENPEP	-660,-611,276370
chr5:96245679-96247431	chr5	+	96245989	96247279	True	NM_001198541,NM_005575	chr5,chr5	-,+	ERAP1,LNPEP	-96141,24066
chr2:69011515-69012053	chr2	+	69011551	69012078	True	NM_014482,NM_001166276,NM_014882	chr2,chr2,chr2	-,+,+	BMP10,ARHGAP25,ARHGAP25	86628,-9679,-9679
chr21:46338307-46339033	chr21	+	46338355	46339021	True	NM_058190,NM_000211,NM_001127491	chr21,chr21,chr21	+,-,-	C21orf70,ITGB2,ITGB2	20933,1994,9782
chr21:46338307-46339033	chr21	-	44262218	44262268	False	NM_033661,NM_001001503	chr21,chr21	-,+	WDR4,NDUFV3	37460,51109
chr1:54364340-54366046	chr1	+	54364448	54365948	True	NM_000792,NM_213593,NR_036640,NM_018982,NR_036639,NM_001039716,NM_001039715	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,-,-,-,+,+	DIO1,DIO1,YIPF1,YIPF1,YIPF1,DIO1,DIO1	-4638,-4638,-8961,-8961,-8961,-4638,-4638
chr1:47903342-47903576	chr1	+	47903398	47903550	True	NR_026878,NM_004474	chr1,chr1	-,+	MGC12982,FOXD2	-3085,-1760
chr4:54243301-54243698	chr4	+	54243322	54243712	True	NM_001134938,NM_001134937,NM_030917,NM_152540	chr4,chr4,chr4,chr4	+,+,+,-	FIP1L1,FIP1L1,FIP1L1,SCFD2	107,107,107,-11080
chrX:103810413-103810620	chrX	+	103810414	103810658	True	NM_153448,NM_017416	chrX,chrX	-,+	ESX1,IL1RAPL2	-310815,337
chr22:24106142-24106516	chr22	+	24106146	24106564	True	NM_213720,NM_013378,NM_182520,NM_005940	chr22,chr22,chr22,chr22	-,-,+,+	CHCHD10,VPREB3,C22orf15,MMP11	3627,-9516,-989,8471
chr16:29373573-29375152	chr16	+	29374185	29374815	True	NR_002939,NM_001031827	chr16,chr16	+,-	RUNDC2C,BOLA2	-71696,91520
chr16:29373573-29375152	chr16	+	21395065	21395695	False	NR_026675,NM_130464	chr16,chr16	+,-	NCRNA00169,NPIPL3	-82947,41013
chr3:51423021-51423472	chr3	+	51423031	51423521	True	NM_001171904,NM_006010,NM_013286	chr3,chr3,chr3	-,+,+	VPRBP,MANF,RBM15B	110547,-391,5177
chr17:6557347-6558107	chr17	+	6557500	6558078	True	NM_016060,NM_001105520	chr17,chr17	-,+	MED31,C17orf100	-2546,-2492
chr19:18264625-18265111	chr19	+	18264709	18264977	True	NM_002866,NM_005027	chr19,chr19	-,+	RAB3A,PIK3R2	49947,-744
chr5:140027216-140027496	chr5	+	140027294	140027536	True	NM_001185012,NM_006083,NR_037428,NM_018502,NM_002488,NR_033697	chr5,chr5,chr5,chr5,chr5,chr5	-,+,+,+,-,-	NDUFA2,IK,MIR3655,TMCO6,NDUFA2,NDUFA2	76,39,-68,-8333,76,76
chr5:93078980-93080063	chr5	+	93079008	93079720	True	NM_005654,NM_153216	chr5,chr5	+,-	NR2F1,POU5F2	-160016,-1699
chr6:42930045-42930246	chr6	+	42930206	42930288	True	NM_018960,NM_000287	chr6,chr6	+,-	GNMT,PEX6	-1758,16743
chrX:52653081-52653951	chrX	+	52653430	52653654	True	NR_027250,NM_173358	chrX,chrX	+,-	SSX8,SSX7	-1496,30346
chr7:102198430-102198945	chr7	+	102198535	102198613	True	NM_001031618,NM_001166339,NM_001097615	chr7,chr7,chr7	+,+,-	SPDYE2,SPDYE2L,POLR2J3	-6907,-6907,14505
chr1:204122072-204122283	chr1	+	204122086	204122331	True	NM_018208,NM_005686	chr1,chr1	-,+	ETNK2,SOX13	-779,-79891
chr16:15071432-15072942	chr10	+	93875678	93875736	True	NM_017824,NM_001178137	chr10,chr10	+,-	MARCH5,CPEB3	175183,127358
chr16:15071432-15072942	chr16	+	15071905	15072969	False	NM_015027,NM_173474	chr16,chr16	+,-	PDXDC1,NTAN1	-3131,76914
chr8:91803410-91803719	chr8	+	91803445	91803635	True	NM_001146273,NM_022351	chr8,chr8	-,+	TMEM64,NECAB1	-145312,285
chr6:153311813-153312772	chr6	+	153312003	153312638	True	NM_194435,NM_012177,NM_001142522	chr6,chr6,chr6	+,-,-	VIP,FBXO5,FBXO5	-240124,-7800,-7263
chr5:36905936-36907160	chr5	+	36906249	36907182	True	NM_133433,NM_023073	chr5,chr5	+,-	NIPBL,C5orf42	-29445,342405
chr2:158970723-158971748	chr2	+	158970896	158971786	True	NM_001111067,NM_173355	chr2,chr2	-,+	ACVR1,UPP2	-238522,-12578
chrX:149732923-149734676	chrX	+	149733217	149734567	True	NM_001184808,NM_000252	chrX,chrX	-,+	CD99L2,MTM1	332772,2479
chr9:44756775-44757375	chr4	-	3551860	3551940	False	NM_002337,NM_173660	chr4,chr4	-,+	LRPAP1,DOK7	-17636,-86878
chr9:44756775-44757375	chr9	+	44756985	44757157	True	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	233078,-1126255
chr9:44756775-44757375	chr9	-	45113841	45113921	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-123656,-1483111
chr9:44756775-44757375	chr9	+	46269396	46269476	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2638666,418089
chr8:76451079-76453000	chr8	+	76451327	76452889	True	NM_004133,NR_024360	chr8,chr8	+,-	HNF4G,LOC100192378	-46,1142671
chr16:90014081-90014471	chr16	+	90014147	90014447	True	NM_207514,NM_017702,NM_145039	chr16,chr16,chr16	+,+,-	DEF8,DEF8,CENPBD1	735,703,24843
chr20:42084888-42085824	chr20	+	42085346	42085797	True	NR_034009,NM_133170,NM_006275	chr20,chr20,chr20	+,-,+	SRSF6,PTPRT,SRSF6	706,-266789,706
chr8:144813623-144814257	chr8	+	144813677	144814297	True	NM_198488,NR_033849	chr8,chr8	-,+	FAM83H,LOC100128338	1667,2012
chr22:39384025-39384842	chr22	+	39384106	39384811	True	NM_014292,NM_004900	chr22,chr22	-,+	CBX6,APOBEC3B	-115848,-5752
chrX:153485631-153486186	chrX	+	153485637	153486193	True	NM_001586,NM_000513,NM_001048181	chrX,chrX,chrX	-,+,+	TEX28,OPN1MW,OPN1MW2	37311,-485,-485
chrX:153485631-153486186	chrX	+	153448519	153449075	False	NM_001586,NM_000513,NM_001048181	chrX,chrX,chrX	-,+,+	TEX28,OPN1MW,OPN1MW2	74429,-485,-485
chrX:153485631-153486186	chrX	+	153410110	153410665	False	NM_020061,NM_001110792	chrX,chrX	+,-	OPN1LW,MECP2	-436,-46922
chr6:52282984-52284841	chr6	+	52283224	52284702	True	NM_018100,NM_001172420,NM_002388,NR_033327	chr6,chr6,chr6,chr6	+,+,-,+	EFHC1,EFHC1,MCM3,EFHC1	291,1102,-133642,291
chr12:48211947-48212878	chr12	+	48211992	48212776	True	NM_015401,NM_017842,NM_001098416	chr12,chr12,chr12	-,+,-	HDAC7,SLC48A1,HDAC7	1037,-45076,1037
chr1:28258199-28259648	chr1	+	28258294	28259545	True	NM_001009568,NM_002946,NM_014474	chr1,chr1,chr1	+,-,+	SMPDL3B,RPA2,SMPDL3B	1958,-17058,1958
chr11:72928371-72928699	chr11	+	72928407	72928719	True	NM_014824,NM_002564,NM_176071,NM_176072	chr11,chr11,chr11,chr11	-,+,+,+	FCHSD2,P2RY2,P2RY2,P2RY2	-75264,624,782,624
chr22:29472694-29473428	chr22	+	29472901	29473316	True	NM_015370,NM_032045,NM_001039570	chr22,chr22,chr22	-,+,+	C22orf31,KREMEN1,KREMEN1	-14994,-3896,-3896
chr6:165558666-165558872	chr6	+	165558675	165558907	True	NM_144980,NR_027284	chr6,chr6	-,+	C6orf118,LOC441177	164262,842131
chr19:17666654-17667114	chr19	+	17666667	17667129	True	NM_138454,NM_024656	chr19,chr19	-,+	NXNL1,GLT25D1	-94942,-207
chr20:48746648-48748595	chr20	+	48746741	48748327	True	NM_005194,NM_199144	chr20,chr20	+,-	CEBPB,UBE2V1	59048,-14247
chr1:23518547-23519252	chr1	+	23518569	23519021	True	NR_036057,NM_000864	chr1,chr1	+,-	MIR3115,HTR1D	-147822,2251
chr12:101566658-101567680	chr12	+	101566847	101567575	True	NM_014503,NM_145913	chr12,chr12	+,-	UTP20,SLC5A8	106329,36491
chr2:197036450-197036655	chr2	+	197036589	197036665	True	NM_001080539,NM_004226	chr2,chr2	+,-	CCDC150,STK17B	467690,-253
chr22:26960641-26962409	chr22	+	26960659	26962097	True	NM_001008566,NR_031615,NM_001886	chr22,chr22,chr22	-,-,+	TPST2,MIR548J,CRYBA4	57,-9370,55830
chr17:77774106-77774681	chr17	+	77774239	77774663	True	NM_005189,NM_020649	chr17,chr17	+,-	CBX2,CBX8	-22317,-3324
chr3:112052698-112053454	chr3	+	112052855	112053471	True	NM_005944,NM_183061,NM_001004196	chr3,chr3,chr3	+,-,+	CD200,SLC9A10,CD200	-1001,-39781,-1001
chr19:58845773-58846133	chr19	+	58845912	58846050	True	NM_181846,NM_130786	chr19,chr19	+,-	ZSCAN22,A1BG	-7585,18865
chr11:35429490-35430162	chr11	+	35429507	35429828	True	NM_014344,NM_004171	chr11,chr11	+,-	FJX1,SLC1A2	209906,11334
chr9:67677508-67677858	chr9	+	67677581	67677873	True	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	116366,248887
chr9:67677508-67677858	chr9	+	44756358	44756408	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	233827,-1125628
chr9:67677508-67677858	chr9	+	46268691	46268741	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2637961,418824
chr9:67677508-67677858	chr9	-	47171572	47171864	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-3540842,-484057
chr6:52662311-52664005	chr6	+	52662329	52663936	True	NM_145740,NM_014051	chr6,chr6	-,+	GSTA1,TMEM14A	4791,-126499
chr22:21620834-21621141	chr22	+	21620836	21621182	True	NR_024583,NR_002829	chr22,chr22	+,-	POM121L8P,P2RX6P	15531,-222298
chr22:21620834-21621141	chr22	-	21497927	21498273	False	NR_037566,NR_002829	chr22,chr22	+,-	BCRP2,P2RX6P	-40673,-99389
chr22:21620834-21621141	chr22	+	18819595	18819941	False	NM_005675,NR_003267	chr22,chr22	+,-	DGCR6,GGT3P	73794,-40121
chr7:100240539-100241681	chr7	+	100240611	100241410	True	NM_005273,NM_003227,NM_023948	chr7,chr7,chr7	+,-,+	GNB2,TFR2,MOSPD3	29952,-1438,-30548
chr20:58581503-58581806	chr20	+	58581511	58581799	True	NM_021810,NM_006242	chr20,chr20	+,-	CDH26,PPP1R3D	-10145,-66159
chr12:57119931-57120221	chr12	+	57119930	57120072	True	NM_001113202,NM_001113203,NM_005594,NM_001113201,NM_003725	chr12,chr12,chr12,chr12,chr12	-,-,-,-,+	NACA,NACA,NACA,NACA,HSD17B6	-604,-604,-864,-864,37035
chr6:26017043-26017595	chr6	+	26017045	26017592	True	NM_005325,NM_003544,NM_003529,NM_003538	chr6,chr6,chr6,chr6	-,-,+,+	HIST1H1A,HIST1H4B,HIST1H3A,HIST1H4A	498,9938,3125,4314
chr10:35535072-35535394	chr10	+	35535134	35535440	True	NM_001198777,NM_181698	chr10,chr10	-,+	CUL2,CCNY	-155564,512
chr7:100488299-100488587	chr7	+	100488319	100488507	True	NM_000665,NM_015908,NM_015831,NM_001015072	chr7,chr7,chr7,chr7	-,+,-,-	ACHE,SRRT,ACHE,UFSP1	5084,-15674,5084,-980
chr1:179105317-179106382	chr1	+	179106064	179106353	True	NM_022371,NM_001168239,NM_001136000,NM_005158	chr1,chr1,chr1,chr1	+,-,-,-	TOR3A,ABL2,ABL2,ABL2	-55013,5930,5930,5930
chr20:36532050-36532269	chr20	+	36532077	36532279	True	NM_080607,NM_014657	chr20,chr20	+,-	VSTM2L,TTI1	-629,129604
chr3:8696590-8696841	chr3	+	8696563	8696882	True	NM_033337,NM_015931	chr3,chr3	+,-	CAV3,C3orf32	78603,-2826
chr3:8696590-8696841	chr3	+	8697167	8697217	False	NM_033337,NM_015931	chr3,chr3	+,-	CAV3,C3orf32	78268,-3430
chr11:35965114-35965508	chr11	+	35965210	35965502	True	NM_174902,NM_001101653	chr11,chr11	+,-	LDLRAD3,COMMD9	109,345547
chr3:101531171-101531377	chr3	+	101531171	101531345	True	NM_001005474,NM_000986	chr3,chr3	+,-	NFKBIZ,RPL24	15488,-125608
chr20:23031811-23032024	chr20	+	23031853	23031975	True	NM_001052,NM_000361	chr20,chr20	+,-	SSTR4,THBD	-15847,-1552
chr17:40977022-40978624	chr17	+	40977157	40978366	True	NM_176863,NM_003766,NM_005789	chr17,chr17,chr17	+,-,+	PSME3,BECN1,PSME3	7056,-847,7056
chr10:81701216-81702241	chr10	+	81701331	81702105	True	NR_002724,NM_003019	chr10,chr10	+,-	MBL1P,SFTPD	-21456,6806
chr11:111803164-111804152	chr11	+	111803361	111803683	True	NM_001885,NM_001037954	chr11,chr11	-,+	CRYAB,DIXDC1	-20888,4243
chr2:196539294-196540250	chr2	+	196539386	196540048	True	NM_020342,NM_018897	chr2,chr2	+,-	SLC39A10,DNAH7	-17587,393538
chr2:157191482-157191984	chr2	+	157191498	157192021	True	NM_001083112,NM_006186	chr2,chr2	+,-	GPD2,NR4A2	99943,-2211
chr20:1978365-1978960	chr20	+	1978509	1978881	True	NM_001190900,NM_001190892,NM_001040023,NM_024411,NM_001190898,NM_001190899	chr20,chr20,chr20,chr20,chr20,chr20	-,-,+,-,-,-	PDYN,PDYN,SIRPA,PDYN,PDYN,PDYN	-4115,-5057,-102736,-3578,-3578,-3578
chr10:28827250-28828646	chr10	+	28827525	28828290	True	NM_016628,NR_033805,NR_024557,NM_100486	chr10,chr10,chr10,chr10	+,-,+,+	WAC,LOC220906,WAC,WAC	-5152,-6242,-6149,-5152
chr7:141628326-141630156	chr7	+	141628366	141630196	True	NM_013252,NM_001001656	chr7,chr7	-,+	CLEC5A,OR9A4	16637,-9752
chr19:53356266-53357997	chr19	+	53356542	53357700	True	NM_199132,NM_152473,NM_001008801	chr19,chr19,chr19	-,+,-	ZNF468,HERV-V1,ZNF468	3252,159643,3252
chr19:36348754-36349316	chr19	+	36348956	36349352	True	NM_199180,NM_004646,NM_032123,NM_199179	chr19,chr19,chr19,chr19	+,-,+,+	KIRREL2,NPHS1,KIRREL2,KIRREL2	-1197,-6061,-1197,-1197
chr7:141618350-141619149	chr7	+	141618375	141619199	True	NM_013252,NM_001001656	chr7,chr7	-,+	CLEC5A,OR9A4	27646,-31
chr8:98656077-98656508	chr8	+	98656137	98656442	True	NM_033512,NM_178812	chr8,chr8	-,+	TSPYL5,MTDH	-365961,-36
chr4:186304955-186305826	chr4	+	186305049	186305805	True	NM_181726,NM_018409	chr4,chr4	+,-	ANKRD37,LRP2BP	12034,-4897
chr5:125804473-125805121	chr5	+	125804484	125804937	True	NM_001146322,NM_001182	chr5,chr5	+,-	GRAMD3,ALDH7A1	-3749,126202
chr2:88272502-88272822	chr2	+	88272630	88272848	True	NM_198274,NM_001024457	chr2,chr2	+,-	SMYD1,RGPD1	94450,12511
chr2:88272502-88272822	chr2	+	74687440	74687490	False	NM_001146158,NM_006302,NM_031288,NM_012477,NR_037849	chr2,chr2,chr2,chr2,chr2	-,-,+,+,+	MOGS,MOGS,INO80B,WBP1,INO80B-WBP1	5097,5097,-5341,-1964,-5341
chr2:88272502-88272822	chr2	-	87157203	87157421	False	NM_004931,NM_001024457	chr2,chr2	-,+	CD8B,RGPD1	-68156,-12516
chr9:116210963-116211573	chr9	+	116211058	116211555	True	NM_144488,NM_017443	chr9,chr9	+,-	RGS3,POLE3	-4107,-38029
chr1:153938356-153939029	chr1	+	153938355	153938818	True	NM_014437,NM_130898,NM_181715	chr1,chr1,chr1	-,+,-	SLC39A1,CREB3L4,CRTC2	1421,1578,-7223
chr3:184093746-184094052	chr3	+	184093757	184093895	True	NM_001177598,NM_003741,NM_000460,NM_001177597	chr3,chr3,chr3,chr3	-,+,-,-	THPO,CHRD,THPO,THPO	2087,3965,2087,2087
chr2:180098131-180099224	chr2	+	180098464	180099230	True	NM_178123,NM_019091	chr2,chr2	-,+	SESTD1,PLEKHA3	30170,-753326
chr10:101688755-101689265	chr10	+	101688995	101689299	True	NR_024130,NM_015221	chr10,chr10	+,-	DNMBP-AS1,DNMBP	-2091,80427
chr1:215177439-215178669	chr1	+	215177439	215178640	True	NM_001017424,NM_005401	chr1,chr1	+,-	KCNK2,PTPN14	244,-452415
chr3:27764599-27764808	chr3	+	27764640	27764803	True	NM_005442,NM_182523	chr3,chr3	-,+	EOMES,CMC1	-855,518320
chrX:48396401-48396653	chrX	+	48396470	48396603	True	NM_033518,NM_002536	chrX,chrX	-,+	SLC38A5,TBC1D25	-67826,1471
chr4:153864524-153865025	chr4	+	153864575	153865055	True	NM_033393,NM_145720	chr4,chr4	+,-	FHDC1,TIGD4	-492,-163659
chrX:48376902-48378103	chrX	+	48377074	48378089	True	NM_033518,NM_203475,NM_203474,NM_022825,NM_203473,NM_006579	chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,+	SLC38A5,PORCN,PORCN,PORCN,PORCN,EBP	-48430,-8961,-8961,-9762,-9762,2074
chr6:26383570-26383774	chr6	+	26383666	26383802	True	NM_006995,NM_003543,NM_181531,NM_001197237,NM_001197239,NM_001197238,NM_001197240	chr6,chr6,chr6,chr6,chr6,chr6,chr6	+,-,+,+,+,+,+	BTN2A2,HIST1H4H,BTN2A2,BTN2A2,BTN2A2,BTN2A2,BTN2A2	-388,-97939,-388,-278,-388,-393,-388
chr19:17326581-17326804	chr19	+	17326620	17326852	True	NM_005234,NM_018467	chr19,chr19	-,+	NR2F6,USE1	29349,-516
chr12:49391435-49391729	chr12	+	49391491	49391583	True	NM_015086,NM_005430	chr12,chr12	-,+	DDN,WNT1	1555,-19306
chr22:50218309-50218881	chr22	+	50218405	50218879	True	NM_014838,NM_014577	chr22,chr22	+,-	ZBED4,BRD1	28617,-37
chr20:61476943-61477619	chr20	+	61477041	61477602	True	NM_006602,NM_080750	chr20,chr20	-,+	TCFL5,DPH3P1	15565,-616
chr12:7847337-7848346	chr12	+	7847425	7848294	True	NM_199286,NM_020634	chr12,chr12	+,-	DPPA3,GDF3	15794,117
chr4:71704837-71705082	chr4	+	71704931	71705033	True	NM_001098477,NM_173468,NM_002092	chr4,chr4,chr4	-,+,-	GRSF1,MOBKL1A,GRSF1	237,63030,644
chr4:2963492-2964009	chr4	+	2963544	2964008	True	NM_003703,NM_182982,NM_001004056,NM_001004057	chr4,chr4,chr4,chr4	-,+,+,+	NOP14,GRK4,GRK4,GRK4	1160,1334,1334,1334
chr20:18568380-18568598	chr20	+	18568491	18568627	True	NM_006606,NM_080820	chr20,chr20	-,+	RBBP9,DTD1	-90604,0
chr8:95653289-95653558	chr8	+	95653376	95653593	True	NM_017697,NR_034034,NM_001122827,NM_001122825,NM_001034915,NM_001122826	chr8,chr8,chr8,chr8,chr8,chr8	+,-,+,+,+,+	ESRP1,LOC100288748,ESRP1,ESRP1,ESRP1,ESRP1	-63,-1681,-63,-63,-63,-63
chrX:148586870-148587353	chrX	+	148586879	148587285	True	NM_006123,NM_001166550,NM_000202,NM_001171907	chrX,chrX,chrX,chrX	-,-,-,+	IDS,IDS,IDS,CXorf40A	5,5,5,35233
chr9:136323600-136324004	chr9	+	136323704	136324042	True	NM_017586,NM_001145099,NM_001135775	chr9,chr9,chr9	+,-,+	C9orf7,SLC2A6,C9orf7	1044,20284,1044
chr22:29975577-29976763	chr22	+	29975701	29976689	True	NM_181825,NM_001202502,NM_003634	chr22,chr22,chr22	+,-,-	NF2,NIPSNAP1,NIPSNAP1	22855,446,687
chr18:55861577-55862109	chr18	+	55861577	55862145	True	NM_001144970,NM_005603	chr18,chr18	+,-	NEDD4L,ATP8B1	491,-391250
chr6:43458478-43458759	chr6	+	43458482	43458772	True	NM_001012974,NM_001146017	chr6,chr6	-,+	C6orf154,TJAP1	19702,-1211
chr19:35642896-35644121	chr19	+	35643173	35643933	True	NM_022006,NM_139284,NM_144779,NM_001164605,NM_014164,NR_028406	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+	FXYD7,LGI4,FXYD5,FXYD5,FXYD5,FXYD5	-9070,-16995,1738,1911,1691,1738
chr5:99382556-99383458	chr5	+	99382850	99383491	True	NM_198507,NR_027503	chr5,chr5	+,-	FAM174A,LOC100133050	487632,340520
chr17:27046336-27046566	chr17	+	27046358	27046482	True	NR_024575,NR_024579,NM_000984,NR_000014,NM_178170,NM_031934,NM_001142624,NR_000013,NR_000009,NR_000010,NM_138463,NM_001144942,NM_152465,NM_001160407,NM_001144943,NM_001142625	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,+,+,-,-,+,+,+,-,-,-,-,-,-	RAB34,RAB34,RPL23A,SNORD42A,NEK8,RAB34,RAB34,SNORD42B,SNORD4B,SNORD4A,TLCD1,RAB34,PROCA1,TLCD1,RAB34,RAB34	-1107,-1107,517,3964,9349,-1450,-1072,1085,4216,3117,6798,-1450,-7486,7517,-1072,-1072
chr1:16767778-16768564	chr1	+	16767898	16768456	True	NM_018090,NM_198546,NM_001145277,NM_001145278	chr1,chr1,chr1,chr1	+,-,+,+	NECAP2,SPATA21,NECAP2,NECAP2	-786,-3979,-786,-786
chr19:10629877-10630197	chr19	+	10629952	10630242	True	NM_001166215,NM_030760,NM_032885	chr19,chr19,chr19	-,-,+	S1PR5,S1PR5,ATG4D	-1284,-1826,24404
chr14:88734635-88735336	chr14	+	88734785	88735153	True	NM_001040428,NM_138318	chr14,chr14	+,-	SPATA7,KCNK10	116834,2152
chr3:111394941-111395396	chr3	+	111395029	111395445	True	NM_001185106,NM_024508,NM_153268	chr3,chr3,chr3	+,-,+	PLCXD2,ZBED2,PLCXD2	-1557,-80863,-1557
chr1:173960591-173961496	chr1	+	173960618	173961238	True	NM_172071,NM_001122770	chr1,chr1	-,+	RC3H1,ZBTB37	1022,-123184
chr4:141489763-141489972	chr4	+	141489771	141489999	True	NM_021833,NM_153702	chr4,chr4	-,+	UCP1,ELMOD2	10,-44510
chr22:31503825-31504307	chr22	+	31503859	31504306	True	NM_080430,NM_001002837	chr22,chr22	-,+	SELM,INPP5J	-308,14654
chr12:121147878-121148152	chr12	+	121147888	121148088	True	NM_001080533,NM_198202	chr12,chr12	+,-	UNC119B,POP5	-108,-128687
chr11:57479664-57479979	chr11	+	57479668	57480028	True	NM_153450,NM_015959,NM_001144012,NR_037646,NR_037645,NR_026593	chr11,chr11,chr11,chr11,chr11,chr11	-,+,+,+,+,+	MED19,TMX2,TMX2,TMX2-CTNND1,TMX2,TMX2	5,6,6,6,6,6
chr9:85673390-85674726	chr9	+	85673438	85674505	True	NM_152573,NM_001001551	chr9,chr9	-,+	RASEF,C9orf103	3588,563527
chr17:58213111-58213510	chr17	+	58213110	58213524	True	NM_000717,NR_027408	chr17,chr17	+,-	CA4,LOC653653	13777,-32830
chr9:132566724-132567271	chr9	+	132566728	132566817	True	NM_000113,NM_014506	chr9,chr9	-,+	TOR1A,TOR1B	19675,-1347
chr3:39142281-39142558	chr3	+	39142330	39142548	True	NM_031899,NM_145755,NM_001105513	chr3,chr3,chr3	-,+,+	GORASP1,TTC21A,TTC21A	6632,6603,6603
chr1:203017769-203018112	chr1	+	203017774	203018126	True	NM_015053,NM_002479	chr1,chr1	+,-	PPFIA4,MYOG	2184,37301
chr14:65019061-65020574	chr14	+	65019241	65020540	True	NM_006977,NM_172365	chr14,chr14	-,+	ZBTB25,C14orf50	-48687,-2680
chr5:17216625-17217509	chr5	+	17216628	17217158	True	NR_027253,NM_006317	chr5,chr5	-,+	LOC285696,BASP1	423,591
chr19:50432833-50433937	chr19	+	50432916	50433848	True	NM_001193357,NM_016553,NM_012068,NM_012346,NM_001193646,NM_153718,NM_153719,NM_172374	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,+,-,+,-,-,-	NUP62,NUP62,ATF5,NUP62,ATF5,NUP62,NUP62,IL4I1	-117,14,-1008,-143,-567,-128,-128,-154
chr11:48264250-48264739	chr11	+	48264305	48264763	True	NM_001004727,NM_001005513	chr11,chr11	+,-	OR4X2,OR4C45	1892,109286
chr12:124157519-124158437	chr12	+	124157612	124158486	True	NM_001414,NM_024809,NM_001143850	chr12,chr12,chr12	-,+,+	EIF2B1,TCTN2,TCTN2	-39289,-2004,-2004
chr9:115813059-115814694	chr9	+	115813198	115814704	True	NM_003408,NR_024366	chr9,chr9	-,+	ZFP37,NCRNA00256A	4343,60471
chr1:208422522-208423761	chr1	+	208422533	208423658	True	NR_026817,NM_025179	chr1,chr1	+,-	LOC148696,PLXNA2	-430864,-4868
chr19:6718485-6719194	chr19	+	6718489	6719228	True	NM_004240,NM_000064	chr19,chr19	+,-	TRIP10,C3	20478,1484
chr19:42896105-42896340	chr19	+	42896150	42896291	True	NM_032488,NM_001410	chr19,chr19	-,+	CNFN,MEGF8	-1706,-66440
chr1:205289685-205290473	chr1	+	205289686	205290368	True	NM_014858,NM_030952	chr1,chr1	+,-	TMCC2,NUAK2	-92710,565
chr2:30670419-30670630	chr2	+	30670545	30670677	True	NM_182551,NM_001002257,NM_144575	chr2,chr2,chr2	+,+,-	LCLAT1,LCLAT1,CAPN13	-473,-459,359684
chr8:37886037-37887497	chr8	+	37886654	37887353	True	NM_000025,NM_004095	chr8,chr8	-,+	ADRB3,EIF4EBP1	-62470,666
chr14:53177003-53178226	chr14	+	53177180	53178263	True	NM_002806,NM_014584	chr14,chr14	+,-	PSMC6,ERO1L	-3347,-14761
chr11:18253102-18253924	chr11	+	18253112	18253780	True	NM_006512,NR_026563	chr11,chr11	-,+	SAA4,LOC494141	4654,-22331
chr16:30596965-30597171	chr16	+	30596999	30597187	True	NM_152458,NM_024031	chr16,chr16	-,+	ZNF785,PRR14	-33,65053
chr4:47498467-47499192	chr4	+	47498467	47498673	True	NM_020453,NM_017845	chr4,chr4	+,-	ATP10D,COMMD8	-11108,-32791
chr1:112096161-112096868	chr1	+	112096160	112096907	True	NM_001081976,NM_001010935	chr1,chr1	-,+	ADORA3,RAP1A	9744,65497
chr20:7923617-7925346	chr20	+	7923775	7925363	True	NM_015192,NM_017545	chr20,chr20	+,-	PLCB1,HAO1	187932,-2682
chr12:7452483-7454150	chr12	+	7452789	7454104	True	NM_174941,NM_001080454	chr12,chr12	-,+	CD163L1,ACSM4	142702,2823
chr19:1240486-1240773	chr19	+	1240568	1240666	True	NM_001001975,NM_177401,NM_001687,NM_152769	chr19,chr19,chr19,chr19	+,+,+,-	ATP5D,MIDN,ATP5D,C19orf26	1082,7885,1082,-2578
chr12:6899729-6900567	chr12	+	6899950	6900298	True	NM_001195015,NM_001195014,NM_001195017,NM_001195016,NR_026581,NR_036545,NM_000616	chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,+,+,-,+,+	CD4,CD4,CD4,CD4,MLF2,CD4,CD4	-1310,-1310,-1310,-1310,-37314,-1310,-1364
chr19:4908852-4909146	chr19	+	4909115	4909183	True	NM_001080523,NM_001048201,NM_013282	chr19,chr19,chr19	-,+,+	ARRDC5,UHRF1,UHRF1	-6236,326,1382
chr2:37315908-37316564	chr2	+	37316006	37316434	True	NM_174931,NM_019024	chr2,chr2	+,-	CCDC75,HEATR5B	-4471,-4521
chr22:50640272-50640523	chr22	+	50640347	50640523	True	NM_031454,NM_020461	chr22,chr22	+,-	SELO,TUBGCP6	-990,42927
chr17:36756944-36757252	chr17	+	36756985	36757063	True	NM_025248,NM_005937	chr17,chr17	-,+	SRCIN1,MLLT6	5170,104809
chr7:99970777-99971173	chr7	+	99970819	99971199	True	NM_178273,NR_003613,NM_178272,NM_013439	chr7,chr7,chr7,chr7	+,-,+,+	PILRA,PMS2P1,PILRA,PILRA	-2,-36889,-2,-2
chr5:131891366-131891672	chr5	+	131891548	131891679	True	NM_005732,NM_000879	chr5,chr5	+,-	RAD50,IL5	936,-12334
chr15:74609788-74610681	chr15	+	74609859	74610305	True	NM_001099773,NM_182791	chr15,chr15	-,+	CYP11A1,CCDC33	48298,594
chr3:52442573-52443290	chr3	+	52442572	52443241	True	NM_004656,NM_173341,NM_016483	chr3,chr3,chr3	-,+,+	BAP1,PHF7,PHF7	819,1285,1285
chr8:124195200-124195400	chr8	+	124195234	124195420	True	NM_032899,NR_024479,NM_207006	chr8,chr8,chr8	+,-,+	FAM83A,LOC100131726,FAM83A	-533,19613,-533
chr3:191047976-191048694	chr3	+	191048016	191048740	True	NM_178335,NM_198152,NM_174908	chr3,chr3,chr3	+,-,+	CCDC50,UTS2D,CCDC50	-1193,-7,-1193
chr4:146398474-146399226	chr4	+	146398724	146399053	True	NM_001003688,NM_005900,NM_001102653	chr4,chr4,chr4	+,+,-	SMAD1,SMAD1,OTUD4	4903,3897,-297892
chr2:9346025-9346299	chr2	+	9346150	9346236	True	NM_003887,NM_001135191,NM_138799	chr2,chr2,chr2	+,+,-	ASAP2,ASAP2,MBOAT2	657,657,-202274
chr15:39872688-39872900	chr15	+	39872842	39872922	True	NM_152597,NM_003246	chr15,chr15	-,+	FSIP1,THBS1	202167,357
chr17:57231934-57232197	chr17	+	57231938	57232216	True	NM_182620,NR_029842,NM_018304,NM_001100595	chr17,chr17,chr17,chr17	-,-,+,-	SKA2,MIR301A,PRR11,SKA2	634,-3356,643,634
chr12:79186069-79187511	chr12	+	79186196	79187548	True	NM_001135805,NM_002583	chr12,chr12	+,-	SYT1,PAWR	70224,897295
chr17:67324862-67326775	chr17	+	67325135	67326761	True	NM_172232,NM_002758	chr17,chr17	-,+	ABCA5,MAP2K6	-1812,84076
chr9:112810445-112810956	chr9	+	112810444	112810826	True	NM_001012993,NM_001004065,NM_001198656	chr9,chr9,chr9	-,+,+	C9orf152,AKAP2,AKAP2	159637,51,51
chr8:94749284-94750849	chr8	+	94749348	94750663	True	NM_203390,NR_027259	chr8,chr8	-,+	RBM12B,C8orf39	2617,1675
chr5:154200201-154200967	chr5	+	154200210	154200983	True	NM_004779,NM_032385	chr5,chr5	+,-	CNOT8,C5orf4	37214,29280
chr11:104010062-104010485	chr11	+	104010167	104010489	True	NM_025208,NM_001001711	chr11,chr11	-,+	PDGFD,DDI1	24588,-102918
chr6:139696769-139697538	chr6	+	139696894	139697460	True	NM_016217,NM_001168389,NM_006079,NM_001168388	chr6,chr6,chr6,chr6	+,-,-,-	HECA,CITED2,CITED2,CITED2	-240696,-1544,-1109,-1395
chr22:29074791-29075151	chr22	+	29074820	29075144	True	NM_001145418,NM_172002	chr22,chr22	-,+	TTC28,HSCB	759,62898
chr11:48004706-48005067	chr11	+	48004747	48005107	True	NM_002843,NM_015231,NM_001098503	chr11,chr11,chr11	+,-,+	PTPRJ,NUP160,PTPRJ	-2695,-134690,-2695
chr3:149465657-149466892	chr3	+	149465838	149466649	True	NM_007282,NM_016094	chr3,chr3	+,-	RNF13,COMMD2	63825,3688
chr16:25232091-25232658	chr16	+	25232395	25232655	True	NM_001012981,NM_001169	chr16,chr16	-,+	ZKSCAN2,AQP8	36250,-4161
chr1:39456074-39456693	chr1	+	39456232	39456566	True	NM_024595,NM_001136275,NM_017821	chr1,chr1,chr1	+,+,-	AKIRIN1,AKIRIN1,RHBDL2	349,349,-48776
chr17:65731658-65732349	chr17	+	65731658	65732219	True	NR_003706,NM_181655	chr17,chr17	+,-	SNORA38B,C17orf58	4566,257598
chr22:31687399-31687741	chr22	+	31687553	31687777	True	NM_001135911,NM_052880,NM_016733	chr22,chr22,chr22	-,-,+	PIK3IP1,PIK3IP1,LIMK2	793,793,-43256
chr5:132300789-132301655	chr5	+	132300855	132301452	True	NM_014423,NM_002154	chr5,chr5	-,+	AFF4,HSPA4	-1501,86209
chr1:46930596-46931058	chr1	+	46930715	46931051	True	NM_147192,NM_001097611	chr1,chr1	+,-	DMBX1,KNCN	41616,85886
chr1:68510940-68512366	chr1	+	68511030	68512272	True	NM_004675,NM_001924	chr1,chr1	-,+	DIRAS3,GADD45A	4238,-360233
chr11:117069983-117070359	chr11	+	117070085	117070359	True	NM_003186,NM_001001522,NM_004716	chr11,chr11,chr11	+,+,-	TAGLN,TAGLN,PCSK7	-96,-96,32502
chr7:26438446-26439780	chr7	+	26438767	26439825	True	NR_022006,NR_015364	chr7,chr7	-,+	KIAA0087,LOC441204	138669,3281
chr3:122919201-122919553	chr3	+	122919353	122919602	True	NM_012430,NM_001031702	chr3,chr3	+,-	SEC22A,SEMA5B	1171,-172777
chr14:92200565-92201139	chr14	+	92200814	92201054	True	NM_024764,NM_017437	chr14,chr14	-,+	CATSPERB,CPSF2	-2401,387243
chr14:89065888-89066675	chr14	+	89065934	89066724	True	NM_207662,NM_007039	chr14,chr14	+,-	ZC3H14,PTPN21	-5255,-44811
chr10:70978581-70979390	chr10	+	70978889	70979056	True	NM_001057,NM_025130	chr10,chr10	-,+	TACR2,HKDC1	197669,1002
chr1:154911462-154911882	chr1	+	154911539	154911845	True	NM_001826,NM_006556	chr1,chr1	+,-	CKS1B,PMVK	35272,-2055
chr9:140352045-140352296	chr9	+	140352171	140352291	True	NM_001130971,NM_001130970,NM_006647,NM_001178064,NM_015537,NM_001130969	chr9,chr9,chr9,chr9,chr9,chr9	-,-,+,-,-,-	NELF,NELF,NOXA1,NELF,NELF,NELF	1545,1545,-34375,1545,1545,1545
chr21:46873936-46874675	chr21	+	46873941	46874693	True	NM_130444,NR_027498,NM_030582	chr21,chr21,chr21	+,-,+	COL18A1,NCRNA00175,COL18A1	730,-28956,730
chr18:48086972-48087205	chr18	+	48086995	48087252	True	NM_002747,NM_001127175	chr18,chr18	+,-	MAPK4,MRO	-562,259232
chr2:197779070-197780680	chr2	+	197779472	197780713	True	NM_001080539,NM_024989	chr2,chr2	+,-	CCDC150,PGAP1	-275167,10791
chr12:52245802-52247437	chr12	+	52245912	52246996	True	NM_001130015,NM_001013690	chr12,chr12	+,-	ANKRD33,FIGNL2	34796,-20211
chr14:54979206-54981004	chr14	+	54979221	54981040	True	NM_004124,NM_006568	chr14,chr14	-,+	GMFB,CGRRF1	-23477,-2686
chr10:81652467-81652819	chr10	+	81652598	81652850	True	NR_033857,NM_003019	chr10,chr10	+,-	LOC100288974,SFTPD	11803,56061
chr19:8118085-8118590	chr19	+	8118115	8118431	True	NM_005624,NM_001419,NM_001201359	chr19,chr19,chr19	+,-,+	CCL25,ELAVL1,CCL25	-520,-47586,-520
chr17:16341372-16342177	chr17	+	16341568	16342064	True	NR_027178,NR_027166,NR_027167,NR_027164,NR_027165,NR_027162,NR_027163,NR_027160,NR_027161,NR_027168,NR_027169,NR_002744,NR_027667,NR_027158,NR_003043,NR_003054,NR_027175,NR_027174,NR_027177,NR_027176,NR_027171,NR_027170,NR_027173,NR_027172,NR_027179,NR_027159,NM_001113567	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,+,-	NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,SNORD49A,NCRNA00188,NCRNA00188,SNORD49B,SNORD65,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,NCRNA00188,C17orf76	236,236,236,236,236,236,236,236,236,236,236,1285,236,236,758,2475,236,236,236,236,236,236,236,236,236,236,53466
chr17:42144522-42145706	chr17	+	42144737	42145422	True	NR_028581,NR_028582,NM_138387,NM_152344	chr17,chr17,chr17,chr17	+,+,+,-	G6PC3,G6PC3,G6PC3,LSM12	2675,2675,2675,-22
chr20:3448608-3450356	chr20	+	3448611	3450078	True	NM_139321,NM_001009984,NM_139322	chr20,chr20,chr20	+,-,+	ATRN,C20orf194,ATRN	1586,-60356,1586
chrX:9737712-9738231	chrX	+	9738004	9738075	True	NM_001649,NM_000273	chrX,chrX	+,-	SHROOM2,GPR143	16420,-3999
chr5:132388591-132389510	chr5	+	132388604	132388928	True	NM_017665,NM_002154	chr5,chr5	-,+	ZCCHC10,HSPA4	-26364,-993
chr1:43232484-43232687	chr1	+	43232609	43232671	True	NM_022356,NM_001146289,NM_024097	chr1,chr1,chr1	-,-,+	LEPRE1,LEPRE1,C1orf50	134,134,244
chr5:172198210-172198414	chr5	+	172198309	172198417	True	NM_004417,NM_001031711	chr5,chr5	-,+	DUSP1,ERGIC1	-106,62805
chr19:4305062-4305652	chr19	+	4305269	4305691	True	NM_024333,NM_001169126,NM_144615	chr19,chr19,chr19	+,-,-	FSD1,TMIGD2,TMIGD2	-729,-2841,-2841
chr7:148790377-148790825	chr7	+	148790384	148790877	True	NM_152411,NM_020781	chr7,chr7	-,+	ZNF786,ZNF398	-2515,32630
chr10:6321678-6321952	chr10	+	6321687	6321965	True	NM_004566,NM_000417	chr10,chr10	+,-	PFKFB3,IL2RA	-76905,-217354
chr11:68746964-68747609	chr11	+	68747112	68747232	True	NM_139075,NM_198923	chr11,chr11	+,-	TPCN2,MRGPRD	69117,1279
chr14:68005917-68007062	chr14	+	68005999	68006757	True	NM_020715,NM_182526	chr14,chr14	+,-	PLEKHH1,TMEM229B	-6042,-23978
chr3:119511361-119511888	chr3	+	119511454	119511874	True	NM_005694,NM_022002	chr3,chr3	-,+	COX17,NR1I2	-115211,-9948
chr7:40174299-40174509	chr7	+	40174325	40174477	True	NM_024728,NM_138701,NM_001193312,NM_001193313,NM_001193311	chr7,chr7,chr7,chr7,chr7	+,-,+,+,+	C7orf10,C7orf11,C7orf10,C7orf10,C7orf10	97,-74,97,97,97
chr8:144496776-144498054	chr8	+	144496974	144497639	True	NM_201589,NM_052924	chr8,chr8	-,+	MAFA,RHPN1	15016,-46000
chr12:132691281-132691532	chr12	+	132691309	132691369	True	NM_024078,NM_021808	chr12,chr12	+,-	NOC4L,GALNT9	-62367,-736
chr15:31197974-31198301	chr15	+	31197986	31198340	True	NM_017762,NM_014967,NM_001146095,NM_001146094,NM_001146096	chr15,chr15,chr15,chr15,chr15	-,+,+,+,+	MTMR10,FAN1,FAN1,FAN1,FAN1	85519,-1961,-1982,-1961,-1961
chr2:220015397-220016544	chr2	+	220015876	220016378	True	NM_024782,NM_024293	chr2,chr2	-,+	NHEJ1,FAM134A	9269,26560
chr7:141738022-141738383	chr7	+	141738077	141738373	True	NM_004668,NM_176817	chr7,chr7	+,-	MGAM,TAS2R38	-42449,-64504
chr1:120900849-120901152	chr1	+	120900888	120901007	True	NR_027337,NM_001004340	chr1,chr1	+,-	HIST2H2BA,FCGR1B	5026,34998
chr1:120900849-120901152	chr1	-	149404204	149404265	False	NR_027484,NM_001024599	chr1,chr1	+,-	FCGR1C,HIST2H2BF	-34972,-4975
chr13:111607522-111608471	chr13	+	111607542	111608164	True	NM_017664,NM_001113511	chr13,chr13	-,+	ANKRD10,ARHGEF7	-40126,159459
chrX:73075519-73076693	chrX	+	73075589	73076221	True	NR_001564,NR_003255	chrX,chrX	-,+	XIST,TSIX	-3001,-63600
chr9:99213624-99214229	chr9	+	99213775	99214113	True	NM_153695,NM_014282	chr9,chr9	-,+	ZNF367,HABP4	-33106,-1412
chr1:7829793-7831166	chr1	+	7830086	7831090	True	NM_006786,NM_004781	chr1,chr1	-,+	UTS2,VAMP3	82064,238
chr9:36574987-36576687	chr9	+	36575244	36576354	True	NM_014791,NM_194330	chr9,chr9	+,-	MELK,RNF38	-2390,-174049
chr5:177421748-177422808	chr5	+	177421882	177422779	True	NM_006261,NM_001079527	chr5,chr5	-,+	PROP1,FAM153C	515,12909
chr12:49961428-49961679	chr12	+	49961508	49961708	True	NM_006337,NM_012284,NM_001012300	chr12,chr12,chr12	-,+,-	MCRS1,KCNH3,MCRS1	253,-28619,-1286
chr2:108604805-108605172	chr2	+	108604838	108605198	True	NR_024439,NM_021815	chr2,chr2	-,+	LOC729121,SLC5A7	-162255,-1894
chr5:75921305-75922618	chr5	+	75921352	75922649	True	NR_028375,NM_004101	chr5,chr5	+,-	NCRUPAR,F2RL2	85113,-2112
chr5:130504590-130506391	chr5	+	130504876	130506337	True	NM_181705,NR_024611,NR_024610,NM_005340	chr5,chr5,chr5,chr5	+,-,-,-	LYRM7,HINT1,HINT1,HINT1	303,-3850,-3842,-3842
chr7:8006463-8007996	chr7	+	8006911	8008023	True	NM_138426,NM_002947	chr7,chr7	+,-	GLCCI1,RPA3	399,-248673
chr13:104115024-104116872	chr13	+	104115259	104116554	True	NR_026965,NM_000452	chr13,chr13	+,-	LOC121952,SLC10A2	-582869,-396063
chr7:75026099-75026917	chr7	+	75026356	75026493	True	NM_198853,NM_198924,NR_003614	chr7,chr7,chr7	+,+,-	TRIM74,TRIM73,PMS2L2	-1505,-1505,-38141
chr7:75026099-75026917	chr7	-	72438406	72438543	False	NR_033323,NR_003602	chr7,chr7	-,+	NSUN5P2,LOC541473	-13104,1648
chr12:39264430-39265791	chr12	+	39264662	39265522	True	NM_001013620,NM_153634	chr12,chr12	+,-	ALG10B,CPNE8	-554158,33961
chr2:29210075-29210448	chr2	+	29210075	29210508	True	NM_199280,NM_001029883	chr2,chr2	+,-	FAM179A,C2orf71	-5965,86680
chr4:2038617-2039033	chr4	+	2038660	2038962	True	NM_001168243,NM_001141936,NM_005663	chr4,chr4,chr4	+,+,-	C4orf48,C4orf48,WHSC2	4757,4814,-27701
chr12:9065206-9065789	chr12	+	9065253	9065827	True	NM_004426,NM_002355	chr12,chr12	+,-	PHC1,M6PR	1488,36475
chr17:16943480-16943920	chr17	+	16943554	16943859	True	NM_015134,NM_201274,NM_012452	chr17,chr17,chr17	+,+,-	MPRIP,MPRIP,TNFRSF13B	2247,2247,-68152
chr3:48757006-48757515	chr3	+	48757082	48757480	True	NM_001005910,NM_001005911,NR_027437,NR_027438,NM_001146178,NM_001146179,NM_006321,NM_001190317,NM_001190316,NM_001005909,NM_016291	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,-,-,+,-,-,-,-	IP6K2,IP6K2,IP6K2,IP6K2,IP6K2,IP6K2,ARIH2,IP6K2,IP6K2,IP6K2,IP6K2	-2371,-2371,-2371,-2371,-2371,-2371,198800,-2371,-2371,-2371,-2371
chr3:186287406-186288113	chr3	+	186287542	186288048	True	NM_016306,NM_001134415,NM_018138	chr3,chr3,chr3	+,-,-	DNAJB11,TBCCD1,TBCCD1	418,334,-2401
chr2:105858501-105858840	chr2	+	105858573	105858785	True	NM_001142621,NM_007227	chr2,chr2	-,+	TGFBRAP1,GPR45	87413,-424
chr17:39660218-39661313	chr17	+	39660467	39661343	True	NM_005801,NM_002274,NM_153490	chr17,chr17,chr17	+,-,-	EIF1,KRT13,KRT13	183783,572,572
chr15:92397568-92397789	chr15	+	92397703	92397819	True	NM_013272,NM_001145044,NR_021493	chr15,chr15,chr15	+,+,-	SLCO3A1,SLCO3A1,LOC100144604	-816,-816,717724
chr4:6786823-6788629	chr4	+	6786969	6788568	True	NM_001100590,NM_203462,NM_014743	chr4,chr4,chr4	+,-,+	KIAA0232,MRFAP1L1,KIAA0232	-2569,-75363,-2569
chr15:41624769-41625137	chr15	+	41624850	41625166	True	NM_007280,NM_018454,NM_001129897,NM_016359	chr15,chr15,chr15,chr15	-,+,+,+	OIP5,NUSAP1,NUSAP1,NUSAP1	-31,-11,-11,-11
chr14:23877551-23878590	chr14	+	23877805	23878477	True	NR_030624,NM_002471,NM_138460	chr14,chr14,chr14	-,-,+	MIR208B,MYH6,CMTM5	8845,-319,-31839
chr14:98671407-98672654	chr14	+	98671531	98672692	True	NR_015430,NM_182560	chr14,chr14	-,+	C14orf64,C14orf177	-227070,505257
chr7:44163349-44163622	chr7	+	44163541	44163621	True	NM_001129,NM_006230,NM_001127218	chr7,chr7,chr7	+,-,-	AEBP1,POLD2,POLD2	-19632,-394,-394
chr4:120346622-120348041	chr4	+	120347197	120348079	True	NR_037596,NR_037630	chr4,chr4	-,+	FLJ14186,LOC645513	-15382,27858
chr4:120346622-120348041	chr4	-	119534797	119535679	False	NM_014822,NM_020961	chr4,chr4	-,+	SEC24D,METTL14	221709,70894
chr7:127231417-127232192	chr7	+	127231688	127232072	True	NM_024523,NM_020369,NM_001662	chr7,chr7,chr7	-,+,+	GCC1,FSCN3,ARF5	-6034,1616,-3333
chr17:75314367-75315419	chr17	+	75314423	75315277	True	NM_006640,NR_036200	chr17,chr17	+,-	SEPT9,MIR4316	319,77909
chr12:43946243-43946449	chr12	+	43946242	43946443	True	NM_025003,NM_001114182	chr12,chr12	-,+	ADAMTS20,IRAK4	-518,206303
chr15:23035739-23037531	chr15	+	23036284	23037434	True	NM_001008892,NM_001184888,NM_030922,NM_001008860,NM_001008894,NM_001033028,NM_001184889	chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,-,-,-,+,-	NIPA2,NIPA2,NIPA2,NIPA2,NIPA2,CYFIP1,NIPA2	-1857,-1857,-1857,-1857,-1857,-80587,-1857
chr2:34087205-34088444	chr2	+	34087440	34088426	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-348549,-134156
chr2:190526827-190527596	chr2	+	190526875	190527371	True	NM_019048,NM_014585	chr2,chr2	+,-	ASNSD1,SLC40A1	-801,-81338
chr19:15847429-15848187	chr19	+	15847634	15848012	True	NM_013939,NM_013938,NR_033864	chr19,chr19,chr19	+,+,-	OR10H2,OR10H3,CYP4F24P	-8852,4190,42836
chr17:72363054-72364793	chr17	+	72363351	72364704	True	NM_181790,NM_001080466	chr17,chr17	+,-	GPR142,BTBD17	-20,-5393
chr17:48047025-48047807	chr17	+	48047171	48047771	True	NM_001934,NM_005220,NM_138281	chr17,chr17,chr17	+,-,+	DLX4,DLX3,DLX4	2358,24867,-660
chr18:659426-660243	chr18	+	659487	660187	True	NM_001071,NM_001012716	chr18,chr18	+,-	TYMS,C18orf56	-1934,-1147
chr6:6680089-6681552	chr6	+	6680118	6681454	True	NM_004271,NR_026970	chr6,chr6	+,-	LY86,LY86-AS1	-91235,-57059
chr5:125701419-125702458	chr5	+	125701543	125702502	True	NM_001146319,NM_001182	chr5,chr5	+,-	GRAMD3,ALDH7A1	-5809,228637
chr16:66993950-66994151	chr16	+	66993950	66994200	True	NM_001185177,NM_001185176,NM_024922,NR_024525	chr16,chr16,chr16,chr16	+,+,+,-	CES3,CES3,CES3,FAM96B	931,7177,931,-25630
chr17:7324838-7325192	chr17	+	7324857	7325158	True	NM_152766,NM_199339,NM_175734	chr17,chr17,chr17	-,+,+	C17orf61,SPEM1,C17orf74	-17407,-1229,3776
chr12:41094250-41094935	chr12	+	41094394	41094961	True	NM_175038,NM_001843,NM_052885	chr12,chr12,chr12	+,+,-	CNTN1,CNTN1,SLC2A13	-8099,-8099,-594733
chr4:74719595-74720675	chr4	+	74719612	74720718	True	NM_002620,NM_002619	chr4,chr4	+,-	PF4V1,PF4	-650,127047
chr1:201978072-201978947	chr1	+	201978390	201978834	True	NM_012134,NM_004433,NM_001114309	chr1,chr1,chr1	-,+,+	LMOD1,ELF3,ELF3	-62674,855,855
chr21:43814851-43815214	chr21	+	43814872	43815084	True	NM_018961,NM_024022,NM_032405,NM_001001895,NR_027348	chr21,chr21,chr21,chr21,chr21	+,-,-,+,-	UBASH3A,TMPRSS3,TMPRSS3,UBASH3A,TMPRSS3	8934,1166,1166,8934,-5619
chr10:118954460-118955499	chr10	+	118954464	118955379	True	NR_037436,NM_181840	chr10,chr10	-,+	MIR3663,KCNK18	-27179,1620
chr14:64107738-64108274	chr14	+	64107953	64108244	True	NM_080666,NM_001008726,NM_015180	chr14,chr14,chr14	-,-,+	WDR89,WDR89,SYNE2	400,60,211438
chr5:159847216-159848934	chr5	+	159847261	159848907	True	NM_006425,NM_004219	chr5,chr5	-,+	SLU7,PTTG1	-1093,-43
chr3:13522858-13523462	chr3	+	13522995	13523323	True	NM_001136041,NM_024827,NM_024923	chr3,chr3,chr3	+,+,-	HDAC11,HDAC11,NUP210	-1202,-1331,-61186
chr10:72201189-72201540	chr10	+	72201214	72201480	True	NM_018055,NM_014431	chr10,chr10	-,+	NODAL,KIAA1274	35,37083
chr1:206776203-206777512	chr1	+	206776285	206777511	True	NM_006893,NM_001201478,NM_001004023	chr1,chr1,chr1	-,-,+	EIF2D,EIF2D,DYRK3	8449,8449,31369
chr2:55747729-55748052	chr2	+	55747760	55748100	True	NM_080667,NM_001122964	chr2,chr2	+,-	CCDC104,SMEK2	-1071,96746
chr22:21919674-21919964	chr22	+	21919679	21919777	True	NM_001128633,NR_028437,NM_003347,NR_028436	chr22,chr22,chr22,chr22	-,+,+,+	RIMBP3C,UBE2L3,UBE2L3,UBE2L3	-13929,2179,2179,2179
chr1:161681129-161681927	chr1	+	161681137	161681699	True	NM_001184866,NM_001184867,NM_001184873,NM_001184872,NM_032738,NM_001184870,NM_001184871,NR_002595	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,+,+,-	FCRLA,FCRLA,FCRLA,FCRLA,FCRLA,FCRLA,FCRLA,RPL31P11	-4426,-4426,-4426,-4426,-4426,-4426,-4426,-26095
chr5:139737856-139739681	chr5	+	139738049	139739523	True	NM_001945,NM_031467	chr5,chr5	-,+	HBEGF,SLC4A9	-11861,263
chr11:60718185-60718430	chr11	+	60718277	60718337	True	NR_027391,NM_006725,NM_016582	chr11,chr11,chr11	-,+,-	SLC15A3,CD6,SLC15A3	970,20777,970
chr2:70476619-70477909	chr2	+	70477010	70477755	True	NM_016297,NM_022173,NM_022037	chr2,chr2,chr2	+,-,-	PCYOX1,TIA1,TIA1	7475,-1231,-1231
chr12:110272287-110272966	chr12	+	110272360	110273014	True	NM_021625,NM_001143852	chr12,chr12	-,+	TRPV4,TCHP	-1148,65064
chr16:90100297-90100751	chr16	+	90100511	90100759	True	NM_001214,NR_023348	chr16,chr16	-,+	C16orf3,GAS8	-4202,-11554
chr1:246905294-246906606	chr1	+	246905397	246906568	True	NM_022366,NM_016002	chr1,chr1	-,+	TFB2M,SCCPDH	-175832,-18084
chr3:148581253-148581698	chr3	+	148581284	148581626	True	NM_001870,NM_003071	chr3,chr3	+,-	CPA3,HLTF	1416,222765
chr5:41507661-41509067	chr5	+	41507777	41509107	True	NM_175921,NM_001005473	chr5,chr5	+,-	C5orf51,PLCXD3	395362,1673
chr22:24577548-24577750	chr22	+	24577622	24577790	True	NM_001099781,NM_019601	chr22,chr22	-,+	GGT5,SUSD2	63370,-229
chr11:33564919-33565912	chr11	+	33565114	33565828	True	NM_012194,NM_001166692	chr11,chr11	+,-	C11orf41,C11orf91	-1288,156508
chr6:126273992-126275963	chr6	+	126274449	126275817	True	NM_016063,NM_138571	chr6,chr6	-,+	HDDC2,HINT3	-651167,2043
chr4:76485455-76486148	chr4	+	76485604	76486000	True	NR_037914,NM_178497	chr4,chr4	-,+	RCHY1,C4orf26	-45964,-4404
chr16:78132746-78133243	chr16	+	78132761	78133229	True	NM_199355,NM_016373,NM_130791,NM_130844	chr16,chr16,chr16,chr16	-,+,+,+	ADAMTS18,WWOX,WWOX,WWOX	-663750,321,321,321
chr12:118542213-118542617	chr12	+	118542217	118542475	True	NM_002567,NM_019086	chr12,chr12	+,-	PEBP1,VSIG10	31394,-407
chr10:127461906-127462150	chr10	+	127461976	127462054	True	NM_147191,NM_078468	chr10,chr10	-,+	MMP21,BCCIP	2386,50049
chr16:69986578-69987072	chr16	+	69986733	69987063	True	NM_001136214,NR_003610,NM_182619	chr16,chr16,chr16	+,-,+	CLEC18A,PDXDC2P,CLEC18A	-2158,112838,-1974
chr3:195807268-195807707	chr3	+	195807403	195807712	True	NM_003234,NR_034088,NM_001128148	chr3,chr3,chr3	-,+,-	TFRC,LOC401109,TFRC	1300,61794,1371
chr15:79706867-79708518	chr15	+	79706987	79708559	True	NM_015206,NM_002891	chr15,chr15	+,-	KIAA1024,RASGRF1	16298,-323772
chr12:57708732-57709756	chr12	+	57709326	57709588	True	NM_014925,NM_001166357	chr12,chr12	-,+	R3HDM2,SHMT2	-5080,-85234
chr10:27266117-27267307	chr10	+	27266151	27267063	True	NR_026795,NM_001172303	chr10,chr10	-,+	NCRNA00202,MASTL	-35221,176689
chr3:195936282-195936700	chr3	+	195936541	195936747	True	NM_001039617,NM_152672	chr3,chr3	-,+	ZDHHC19,OSTalpha	1603,6635
chr1:9650408-9651373	chr1	+	9650492	9651322	True	NM_001130924,NR_027045,NM_001010866	chr1,chr1,chr1	+,-,+	TMEM201,C1orf200,TMEM201	-1611,63372,-1611
chr10:103575942-103577485	chr10	+	103576241	103577440	True	NR_036114,NM_012215,NM_001142434	chr10,chr10,chr10	+,-,-	MIR3158-1,MGEA5,MGEA5	-215118,832,832
chr4:39644187-39645405	chr4	+	39644247	39644877	True	NM_174921,NM_001111112	chr4,chr4	-,+	C4orf34,UBE2K	-3766,54786
chr9:38445832-38446390	chr9	+	38445864	38446310	True	NM_001007563,NM_000692	chr9,chr9	-,+	IGFBPL1,ALDH1B1	-21420,-53220
chr19:48823959-48824349	chr19	+	48824008	48824206	True	NM_144577,NM_001425	chr19,chr19	-,+	CCDC114,EMP3	-676,4422
chr20:2854610-2854841	chr20	+	2854682	2854834	True	NM_002836,NM_022760,NM_080840	chr20,chr20,chr20	+,-,+	PTPRA,FAM113A,PTPRA	-9894,-33350,-593
chr9:131103451-131104108	chr9	+	131103558	131103924	True	NM_015679,NM_005094	chr9,chr9	-,+	TRUB2,SLC27A4	-18861,-771
chr19:47103204-47103823	chr19	+	47103296	47103802	True	NM_001205281,NM_005184	chr19,chr19	-,+	LOC100506012,CALM3	705,709
chr10:70484144-70484817	chr10	+	70484246	70484627	True	NM_018237,NM_152707	chr10,chr10	+,-	CCAR1,SLC25A16	-3326,-196966
chr4:984129-984688	chr4	+	984327	984465	True	NM_022042,NM_000203,NM_134425,NM_213613	chr4,chr4,chr4,chr4	-,+,-,-	SLC26A1,IDUA,SLC26A1,SLC26A1	2768,-3593,2768,2809
chr19:55580126-55580385	chr19	+	55580341	55580421	True	NR_027382,NM_001145971,NR_027381,NM_138412,NM_133180	chr19,chr19,chr19,chr19,chr19	-,-,-,-,+	RDH13,RDH13,RDH13,RDH13,EPS8L1	-5756,-5756,-5756,543,6799
chr17:67234225-67235837	chr17	+	67234343	67235762	True	NM_080282,NM_002758	chr17,chr17	-,+	ABCA10,MAP2K6	5245,175075
chr1:43283144-43283683	chr1	+	43283148	43283695	True	NM_018538,NM_199342,NM_001017922	chr1,chr1,chr1	+,-,+	ERMAP,CCDC23,ERMAP	7553,-89,-423
chr7:17950980-17952124	chr7	+	17951466	17951974	True	NM_001204144,NM_015132	chr7,chr7	+,-	HDAC9,SNX13	174597,28207
chr16:84076178-84076469	chr16	+	84076286	84076442	True	NM_001080442,NM_019065	chr16,chr16	-,+	SLC38A8,NECAB2	-524,-74100
chr2:201935297-201936193	chr2	+	201935402	201936216	True	NM_002491,NM_173822	chr2,chr2	+,-	NDUFB3,FAM126B	245,226
chr16:28987515-28988140	chr16	+	28987645	28988172	True	NM_001014987,NM_024816,NM_001014989,NM_001014988,NM_001142448,NM_001142449,NM_001142451,NM_001142450,NM_032038,NM_014387	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,-,+,+,+,+,+,+,+,+	LAT,RABEP2,LAT,LAT,SPNS1,SPNS1,SPNS1,SPNS1,SPNS1,LAT	8214,-51113,7974,8214,-1600,-1600,-1600,-1600,-1600,8214
chr7:102788857-102789651	chr7	+	102788951	102789661	True	NR_026660,NM_198990,NM_001122838,NM_031905	chr7,chr7,chr7,chr7	-,-,-,+	RPL19P12,NAPEPLD,NAPEPLD,ARMC10	-6101,-42,-42,-73681
chr19:52254929-52255411	chr19	+	52254989	52255411	True	NM_002029,NM_001193306,NM_001005738	chr19,chr19,chr19	-,-,+	FPR1,FPR1,FPR2	25,25,9041
chr22:31744595-31744985	chr22	+	31744706	31744964	True	NM_014323,NM_004147,NM_032051,NM_032050,NM_032052	chr22,chr22,chr22,chr22,chr22	-,+,-,-,-	PATZ1,DRG1,PATZ1,PATZ1,PATZ1	-2457,50574,-2457,-2457,-2457
chr2:242801594-242801821	chr2	+	242801616	242801752	True	NM_173821	chr2	+	C2orf85	10133
chr7:10979043-10979845	chr7	+	10979135	10979887	True	NM_002489,NM_014660	chr7,chr7	-,+	NDUFA4,PHF14	-24,33611
chr14:63785332-63787181	chr14	+	63785351	63787168	True	NM_145171,NM_020663	chr14,chr14	-,+	GPHB5,RHOJ	-788,-114258
chr3:190594148-190594350	chr19	+	47870124	47870338	False	NM_001009813,NM_014681	chr19,chr19	-,+	MEIS3,DHX34	52497,-17638
chr3:190594148-190594350	chr3	+	190594148	190594362	True	NR_024343,NM_001146686	chr3,chr3	+,-	SNAR-I,GEMC1	1356,-13683
chr3:52726490-52727692	chr3	+	52726763	52727709	True	NR_003047,NM_018313,NR_003687,NM_152932,NM_014366,NR_003057,NM_206825,NM_206826	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,-,+,-,+,+,+,+	SNORD19,PBRM1,SNORD19B,GLT8D1,GNL3,SNORD69,GNL3,GNL3	-3559,-6897,-2061,9963,-6879,-63,-6879,-6879
chr12:70006727-70008571	chr12	+	70006846	70008060	True	NM_201550,NM_001198842	chr12,chr12	-,+	LRRC10,CCT2	-1904,-27435
chr7:138142006-138142403	chr7	+	138142142	138142216	True	NM_174959,NM_015905,NM_003852	chr7,chr7,chr7	-,+,+	SVOPL,TRIM24,TRIM24	206803,2862,2862
chr12:56729780-56730105	chr12	+	56729911	56729975	True	NM_001127460,NM_014871,NM_001166279,NM_016584	chr12,chr12,chr12,chr12	-,-,-,+	PAN2,PAN2,PAN2,IL23A	-2378,-2074,-2074,2687
chr5:150159985-150161301	chr5	+	150160037	150161174	True	NM_032947,NM_016221	chr5,chr5	+,-	C5orf62,DCTN4	-2580,-21380
chr2:8021777-8023004	chr2	+	8021914	8022802	True	NM_002166,NR_015405	chr2,chr2	+,-	ID2,LOC339788	799310,94193
chr12:50305512-50306545	chr12	+	50305566	50306376	True	NM_000486,NM_012306,NR_026948	chr12,chr12,chr12	+,-,-	AQP2,FAIM2,LOC283332	38147,-7806,80
chr2:74646230-74647020	chr2	+	74646494	74646669	True	NM_001145054,NM_032118	chr2,chr2	-,+	C2orf81,WDR54	-1650,2215
chr17:61714347-61715977	chr17	+	61714412	61715853	True	NM_203351,NM_030576	chr17,chr17	+,-	MAP3K3,LIMD2	-14663,61717
chr8:37372257-37373188	chr8	+	37372300	37373228	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	180072,232386
chr7:99098506-99099101	chr7	+	99098573	99099135	True	NM_145102,NM_014569,NM_032164	chr7,chr7,chr7	+,+,-	ZKSCAN5,ZKSCAN5,ZNF394	3137,3437,-696
chr14:24594107-24595820	chr14	+	24594476	24595774	True	NM_016049,NM_203402,NM_006263,NM_176783	chr14,chr14,chr14,chr14	-,+,+,+	FAM158A,FITM1,PSME1,PSME1	15073,4900,9603,9603
chr12:25148975-25149537	chr12	+	25149107	25149519	True	NM_001101339,NM_001204126	chr12,chr12	-,+	C12orf77,LRMP	904,55661
chrX:77151872-77152274	chrX	+	77151905	77152228	True	NM_001866,NM_032121	chrX,chrX	+,-	COX7B,MAGT1	2732,-840
chr16:15591735-15592181	chr16	+	15591749	15591983	True	NM_001184998,NM_001142469	chr16,chr16	-,+	KIAA0430,C16orf45	145090,4139
chr17:42422791-42423034	chr17	+	42422797	42423041	True	NM_198475,NM_002087	chr17,chr17	-,+	FAM171A2,GRN	18244,-357
chr20:19193720-19193987	chr20	+	19193864	19194028	True	NR_024564,NM_020689	chr20,chr20	-,+	LOC100130264,SLC24A3	71262,-625
chr2:238321566-238321779	chr2	+	238321592	238321764	True	NM_001042467,NM_057164,NM_057165,NM_057166,NM_057167,NM_004369	chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-	MLPH,COL6A3,COL6A3,COL6A3,COL6A3,COL6A3	74113,1136,1136,1136,1136,1136
chr1:168195860-168196216	chr1	+	168195957	168196055	True	NR_026844,NM_199344	chr1,chr1	-,+	ANKRD36BP1,SFT2D2	20663,-753
chr1:147613912-147614774	chr1	+	147614115	147614597	True	NM_001101663,NM_001097616,NM_183372	chr1,chr1,chr1	-,+,-	NBPF24,GPR89C,NBPF11	-4034,-188599,9932
chr1:147613912-147614774	chr1	-	146379967	146380035	False	NR_024442,NR_002305	chr1,chr1	-,+	LOC728989,PDIA3P	134623,269394
chr1:147613912-147614774	chr1	+	146072279	146072761	False	NM_001101663,NM_001097616,NM_183372	chr1,chr1,chr1	-,+,-	NBPF24,GPR89C,NBPF11	-4034,-188462,9932
chr3:10205445-10206123	chr3	+	10205568	10205959	True	NM_001570,NM_001164839	chr3,chr3	+,-	IRAK2,C3orf24	603,-55653
chr12:42603893-42605705	chr12	+	42604154	42604876	True	NM_001190977,NM_201438	chr12,chr12	-,+	YAF2,PPHLN1	27273,115070
chr11:67449980-67450652	chr11	+	67450326	67450538	True	NM_007103,NM_000695,NM_001031615	chr11,chr11,chr11	+,-,-	NDUFV1,ALDH3B2,ALDH3B2	-76055,-8224,-1641
chr18:11378688-11379919	chr18	+	11378824	11379577	True	NM_022068,NM_182978	chr18,chr18	-,+	FAM38B,GNAL	-230063,309558
chr19:45682296-45682507	chr19	+	45682472	45682540	True	NM_212550,NM_024108	chr19,chr19	+,-	BLOC1S3,TRAPPC6A	-520,-987
chrX:111326135-111326568	chrX	+	111326556	111326616	True	NM_012471,NM_001004308	chrX,chrX	-,+	TRPC5,ZCCHC16	-552,-354
chr11:57155430-57156169	chr11	+	57155460	57156207	True	NM_002728,NM_006093,NM_002559	chr11,chr11,chr11	-,-,+	PRG2,PRG3,P2RX3	1973,-6837,-49562
chr20:40238789-40239120	chr20	+	40238789	40239084	True	NM_032221,NM_022896	chr20,chr20	-,+	CHD6,LPIN3	8104,-269286
chrX:54071451-54072737	chrX	+	54071602	54072700	True	NM_001184897,NM_001184896,NM_015107,NM_058163,NM_001184898	chrX,chrX,chrX,chrX,chrX	-,-,-,+,-	PHF8,PHF8,PHF8,TSR2,PHF8	-995,-33,-995,394152,-1975
chr6:163837173-163837483	chr6	+	163837189	163837511	True	NM_206854,NM_206855,NM_006775,NR_037593,NM_206853	chr6,chr6,chr6,chr6,chr6	+,+,+,-,+	QKI,QKI,QKI,LOC100526820,QKI	-1566,-1566,-1566,-2207,-1566
chr15:28981437-28982772	chr15	+	28981596	28982558	True	NR_033351,NR_026589	chr15,chr15	-,+	GOLGA8F,WHAMML2	-203453,170
chr15:28981437-28982772	chr15	-	23209077	23209274	False	NR_024074,NR_003521	chr15,chr15	+,-	GOLGA8IP,WHAMML1	45967,-720
chr17:17380493-17381440	chr17	+	17380551	17381189	True	NM_018019,NM_001199989	chr17,chr17	+,-	MED9,RASD1	-303,18577
chr14:77791438-77792223	chr14	+	77791607	77792263	True	NM_001513,NM_145870,NM_145871,NM_013382	chr14,chr14,chr14,chr14	+,+,+,-	GSTZ1,GSTZ1,GSTZ1,POMT2	-3952,-4428,-4428,-4382
chr7:154796145-154797737	chr7	+	154796329	154797788	True	NR_028090,NM_007349	chr7,chr7	+,-	LOC202781,PAXIP1	-1243,-1647
chr13:113867021-113868960	chr13	+	113867191	113868651	True	NM_001127203,NM_003589,NM_001127202,NM_001008895,NM_018386	chr13,chr13,chr13,chr13,chr13	-,+,-,+,-	PCID2,CUL4A,PCID2,CUL4A,PCID2	-4162,-4156,-4162,-3311,-4162
chr6:166754859-166755788	chr6	+	166755045	166755670	True	NM_145169,NR_027284	chr6,chr6	-,+	SFT2D1,LOC441177	371,-354057
chr18:33229395-33230106	chr18	+	33229608	33230094	True	NM_194281,NM_020474	chr18,chr18	-,+	INO80C,GALNT1	-151653,4438
chr12:64201503-64202530	chr12	+	64201704	64202566	True	NM_014254,NM_173812	chr12,chr12	+,-	TMEM5,DPY19L2	-28119,-139350
chr7:29602716-29603175	chr7	+	29602803	29603173	True	NR_024278,NM_175887	chr7,chr7	-,+	LOC646762,PRR15	121631,253
chr14:61191087-61192740	chr14	+	61191227	61192529	True	NM_017420,NM_001177963,NM_002431	chr14,chr14,chr14	-,+,+	SIX4,MNAT1,MNAT1	-375,8929,8929
chr17:80375417-80375995	chr17	+	80375513	80375873	True	NM_173620,NM_175902,NR_033265,NM_024648	chr17,chr17,chr17,chr17	+,-,-,-	HEXDC,C17orf101,C17orf101,C17orf101	378,690,690,690
chr9:127538004-127538398	chr9	+	127538141	127538323	True	NM_001489,NM_033334,NM_182487	chr9,chr9,chr9	-,-,+	NR6A1,NR6A1,OLFML2A	-4565,-4565,1113
chr22:39916949-39917161	chr22	+	39917025	39917097	True	NM_194326,NM_182810,NM_001675	chr22,chr22,chr22	-,+,+	RPS19BP1,ATF4,ATF4	11813,-507,-507
chr14:35098175-35098719	chr14	+	35098191	35098767	True	NR_002937,NM_021249,NM_152233	chr14,chr14,chr14	+,-,-	C14orf19,SNX6,SNX6	310360,598,649
chr12:82752651-82754534	chr12	+	82753006	82754542	True	NM_032230,NM_014167,NR_033192	chr12,chr12,chr12	+,-,-	C12orf26,CCDC59,CCDC59	-781,-807,-422
chrX:135057090-135057796	chrX	+	135057211	135057851	True	NM_173470,NM_006359,NM_001042537,NM_001177651	chrX,chrX,chrX,chrX	-,+,+,+	MMGT1,SLC9A6,SLC9A6,SLC9A6	-1077,9734,9734,9731
chrX:69483189-69484357	chrX	+	69483365	69484388	True	NM_004312,NM_002565	chrX,chrX	+,-	ARR3,P2RY4	3796,-3711
chr1:53066457-53067837	chr1	+	53066463	53067653	True	NM_015696,NM_015269	chr1,chr1	+,-	GPX7,ZCCHC11	389,-47701
chr4:159462114-159463048	chr4	+	159462292	159462931	True	NM_001008393,NM_021634	chr4,chr4	-,+	C4orf46,RXFP1	130322,-19300
chr19:35820673-35821595	chr19	+	35820688	35821574	True	NM_152481,NM_001771,NM_001185099,NM_001185100,NM_001185101	chr19,chr19,chr19,chr19,chr19	-,+,+,+,+	FAM187B,CD22,CD22,CD22,CD22	-101060,-667,-667,-667,-667
chr12:97881587-97882971	chr12	+	97881602	97882695	True	NR_031653,NR_036189	chr12,chr12	+,-	MIR1251,MIR4303	2991,506582
chr2:231791699-231792802	chr2	+	231791820	231792492	True	NM_030926,NM_005683	chr2,chr2	+,-	ITM2C,GPR55	-62250,-1879
chr8:66560872-66562232	chr8	+	66560872	66561247	True	NM_018120,NM_014637,NM_001145839	chr8,chr8,chr8	-,+,+	ARMC1,MTFR1,MTFR1	-14420,-4042,-4042
chr17:60145904-60146347	chr17	+	60145989	60146171	True	NM_001144933,NM_005121	chr17,chr17	+,-	EFCAB3,MED13	301407,-3346
chr2:207648092-207648719	chr2	+	207648128	207648622	True	NR_036077,NR_036078	chr2,chr2	-,+	MIR3130-1,MIR3130-2	-96,-226
chr13:25540382-25541581	chr13	+	25540664	25541487	True	NR_026730,NM_030979	chr13,chr13	-,+	TPTE2P1,PABPC3	1179,128788
chr11:119063515-119065389	chr11	+	119063659	119064804	True	NM_001145018,NM_001168468,NR_033122,NM_024791	chr11,chr11,chr11,chr11	-,+,+,+	CCDC153,PDZD3,PDZD3,PDZD3	1837,-7544,-7544,-7544
chr8:22019380-22019714	chr8	+	22019465	22019719	True	NM_139278,NM_001199,NM_001172357,NR_033403,NR_033404,NM_001172410,NM_006129,NM_003018	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,+,+,+,+,+,+,+	LGI3,BMP1,SFTPC,BMP1,BMP1,SFTPC,BMP1,SFTPC	-5121,2933,-339,2933,2933,-339,2933,-339
chrX:23916524-23918511	chrX	+	23916755	23918430	True	NM_024122,NM_001169574,NR_026545,NM_152761	chrX,chrX,chrX,chrX	-,+,-,+	APOO,CXorf58,APOO,CXorf58	7686,7692,7686,7692
chr1:26491212-26492525	chr1	+	26491538	26492360	True	NM_015871,NM_024869,NM_032588	chr1,chr1,chr1	+,+,-	ZNF593,GRRP1,TRIM63	4027,-6078,-97417
chr17:33478314-33480082	chr17	+	33478510	33479980	True	NM_018096,NM_173167,NM_001014445,NM_001033576	chr17,chr17,chr17,chr17	-,+,-,+	NLE1,UNC45B,NLE1,UNC45B	-9188,-3725,-9188,-3725
chr6:109871160-109871444	chr6	+	109871253	109871461	True	NM_001164313,NM_003080	chr6,chr6	-,+	ZBTB24,SMPD2	-66813,-109376
chr15:64648468-64649251	chr15	+	64648550	64649258	True	NM_022048,NM_016213	chr15,chr15	-,+	CSNK1G1,TRIP4	-108,30744
chr17:27531874-27532333	chr17	+	27531993	27532313	True	NM_203318,NM_005208	chr17,chr17	-,+	MYO18A,CRYBA1	-24586,41561
chr8:139927304-139928111	chr8	+	139927312	139928142	True	NM_017444,NM_152888	chr8,chr8	+,-	CHRAC1,COL22A1	1593258,-1076
chr11:77348555-77348848	chr11	+	77348622	77348838	True	NM_173039,NM_001293	chr11,chr11	+,-	AQP11,CLNS1A	-47993,63
chr7:79764782-79764992	chr7	+	79764809	79765040	True	NM_001102386,NM_002069	chr7,chr7	-,+	GNAT3,GNAI1	376252,-720
chr16:2580269-2581185	chr16	+	2580380	2581102	True	NM_001048212,NR_036139,NM_031268,NM_002613	chr16,chr16,chr16,chr16	-,-,+,+	CEMP1,MIR3178,PDPK1,PDPK1	357,954,6867,6867
chr15:93015210-93015423	chr15	+	93015213	93015431	True	NR_021493,NM_153040	chr15,chr15	-,+	LOC100144604,C15orf32	100112,-357
chr5:141348316-141348542	chr5	+	141348321	141348523	True	NM_183399,NM_183398,NM_001201365,NM_016580,NM_183401,NM_183400,NM_004290	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,-,+,+,+	RNF14,RNF14,RNF14,PCDH12,RNF14,RNF14,RNF14	-1970,15,-1970,-9694,188,15,15
chr2:9144627-9146097	chr2	+	9144752	9145737	True	NM_001135191,NM_138799	chr2,chr2	+,-	ASAP2,MBOAT2	201156,-876
chr9:73661060-73661505	chr9	+	73661193	73661499	True	NM_015110,NM_001007471	chr9,chr9	+,-	SMC5,TRPM3	-787375,75065
chr8:67524689-67524899	chr8	+	67524705	67524923	True	NM_019607,NM_001080416,NM_001144755	chr8,chr8,chr8	+,-,-	C8orf44,MYBL1,MYBL1	54863,607,607
chr22:51115006-51116092	chr22	+	51115032	51116140	True	NM_001080420,NM_001085428	chr22,chr22	+,-	SHANK3,ARSA	-2013,-48431
chr16:67280599-67281002	chr16	+	67280639	67281043	True	NM_013241,NM_004594	chr16,chr16	-,+	FHOD1,SLC9A5	432,1811
chr6:49449951-49450545	chr6	+	49450109	49450415	True	NM_000255,NM_001010904	chr6,chr6	-,+	MUT,GLYATL3	-19068,17255
chr10:134350013-134350301	chr10	+	134350107	134350301	True	NM_005539,NM_173575	chr10,chr10	+,-	INPP5A,STK32C	1051,-228630
chr9:44762181-44762988	chr9	+	44762407	44762887	True	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	227348,-1131677
chr18:75699343-75700356	chr18	+	75699596	75700343	True	NM_001480,NM_001025100	chr18,chr18	+,-	GALR1,MBP	-737650,-854822
chr20:6024807-6025939	chr20	+	6024826	6025808	True	NM_001127458,NM_152611	chr20,chr20	+,-	CRLS1,LRRN4	-36979,8939
chr15:92938381-92938974	chr15	+	92938550	92938910	True	NM_006011,NR_021493	chr15,chr15	+,-	ST8SIA2,LOC100144604	-1461,176633
chr9:27528603-27529029	chr9	+	27528677	27528743	True	NM_024761,NM_020124	chr9,chr9	-,+	MOBKL2B,IFNK	1157,-4416
chr10:104678898-104679155	chr10	+	104678933	104679175	True	NM_199077,NM_017649,NM_000102,NM_199076	chr10,chr10,chr10,chr10	+,+,-,+	CNNM2,CNNM2,CYP17A1,CNNM2	-870,-870,-81643,-870
chr4:5721165-5721622	chr4	+	5721171	5721674	True	NM_001166136,NM_153717	chr4,chr4	-,+	EVC2,EVC	-9896,-8298
chr12:49301655-49302474	chr12	+	49301676	49302363	True	NM_001143781,NM_033124	chr12,chr12	-,+	FKBP11,CCDC65	16362,-3838
chr3:187449513-187451403	chr3	+	187449634	187451426	True	NM_001134738,NM_001130845,NR_034062	chr3,chr3,chr3	-,-,+	BCL6,BCL6,LOC100131635	1319,2909,-29531
chr18:56700973-56701326	chr18	+	56701051	56701285	True	NR_024021,NM_013435	chr18,chr18	+,-	LOC390858,RAX	1685,239392
chr17:2494849-2495295	chr17	+	2495139	2495322	True	NM_000430,NM_024086	chr17,chr17	+,-	PAFAH1B1,METTL16	1600,-79939
chr7:155452491-155454232	chr7	+	155452596	155453710	True	NM_001103176,NM_053043	chr7,chr7	-,+	CNPY1,RBM33	-126057,-15444
chr11:7537482-7538002	chr11	+	7537491	7537944	True	NM_003621,NM_016229	chr11,chr11	+,-	PPFIBP2,CYB5R2	-2541,156927
chr20:973607-973966	chr20	+	973648	974006	True	NM_001040007,NM_001029871,NM_178578	chr20,chr20,chr20	-,-,+	RSPO4,RSPO4,PSMF1	8951,8951,119899
chr7:148726976-148727646	chr7	+	148727296	148727647	True	NM_004911,NM_020781	chr7,chr7	-,+	PDIA4,ZNF398	-1514,95860
chr4:140005072-140005285	chr4	+	140005076	140005328	True	NM_006874,NM_012118	chr4,chr4	-,+	ELF2,CCRN4L	369,-68184
chr19:18529386-18529944	chr19	+	18529574	18529976	True	NM_032627,NM_001170939,NM_001009998	chr19,chr19,chr19	+,-,+	SSBP4,ISYNA1,SSBP4	169,18995,169
chr13:24155151-24155375	chr13	+	24155168	24155251	True	NM_001204458,NM_014363,NM_018647	chr13,chr13,chr13	+,-,+	TNFRSF19,SACS,TNFRSF19	-1720,-147327,-1720
chr22:42541633-42542496	chr22	+	42541937	42542507	True	NR_002570,NR_034118	chr22,chr22	-,+	CYP2D7P1,LOC100132273	-1362,-55057
chr11:111383778-111384749	chr11	+	111383870	111384771	True	NM_001100388,NR_029839,NM_017589,NM_207430,NR_029840	chr11,chr11,chr11,chr11,chr11	+,+,-,+,+	C11orf88,MIR34B,BTG4,C11orf88,MIR34C	738,-258,-806,738,-55
chr7:71796189-71797836	chr7	+	71796420	71797790	True	NR_001588,NM_001017440	chr7,chr7	+,-	SBDSP1,CALN1	502161,4468
chrX:6143783-6144171	chrX	+	6143837	6144117	True	NM_020742,NM_000351,NM_181332	chrX,chrX,chrX	-,+,-	NLGN4X,STS,NLGN4X	1822,993354,2640
chrY:21903855-21904449	chrY	+	21903913	21904403	True	NM_032576,NM_001146705,NM_004653,NM_001146706	chrY,chrY,chrY,chrY	+,-,-,-	CYorf15B,KDM5D,KDM5D,KDM5D	-145535,2484,2484,2484
chr1:42620361-42620685	chr1	+	42620366	42620636	True	NM_007102,NM_033553	chr1,chr1	+,-	GUCA2B,GUCA2A	-1325,9809
chr1:202311778-202312900	chr1	+	202312004	202312859	True	NM_014176,NM_001167858,NM_002481,NM_001167857	chr1,chr1,chr1,chr1	-,+,+,+	UBE2T,PPP1R12B,PPP1R12B,PPP1R12B	-910,4970,4970,4970
chr2:79347472-79348718	chr2	+	79347477	79348587	True	NR_002714,NM_002909	chr2,chr2	-,+	REG1P,REG1A	17016,-34
chr12:125017839-125018400	chr12	+	125018067	125018399	True	NM_001077261,NM_181709	chr12,chr12	-,+	NCOR2,FAM101A	33661,-244408
chr6:16128343-16128864	chr6	+	16128368	16128910	True	NM_013262,NR_036448	chr6,chr6	+,-	MYLIP,DTNBP1	406,-465079
chr8:131412959-131413216	chr8	+	131413048	131413128	True	NM_015137,NM_018482	chr8,chr8	+,-	EFR3A,ASAP1	1503227,1145
chr3:141202082-141202698	chr3	+	141202083	141202684	True	NM_006506,NM_001178140	chr3,chr3	+,-	RASA2,TFDP2	3241,516604
chr17:79896809-79897066	chr17	+	79896809	79897099	True	NR_015454,NM_001145113,NM_153824,NM_006907	chr17,chr17,chr17,chr17	+,-,-,-	LOC92659,MYADML2,PYCR1,PYCR1	-11155,8060,-1841,-1841
chr2:242254616-242255196	chr2	+	242254951	242255195	True	NM_005336,NM_001008492,NM_001008491,NM_006155,NM_004404	chr2,chr2,chr2,chr2,chr2	-,+,+,+,+	HDLBP,SEPT2,SEPT2,SEPT2,SEPT2	109,85,-279,-279,85
chr16:50772435-50773748	chr16	+	50772552	50773779	True	NM_001042355,NM_001042412,NM_015247,NM_182854	chr16,chr16,chr16,chr16	+,+,+,-	CYLD,CYLD,CYLD,SNX20	2181,2249,2181,-57288
chr2:10089212-10089761	chr2	+	10089224	10089755	True	NM_001037160,NM_198182	chr2,chr2	-,+	CYS1,GRHL1	130833,2036
chr3:61208411-61210174	chr3	+	61208499	61209885	True	NM_002841,NM_001166243	chr3,chr3	+,-	PTPRG,FHIT	337357,27298
chr4:168155235-168155492	chr4	+	168155246	168155452	True	NM_001204359,NM_001204358,NM_001204355,NM_001204354,NM_001204357,NM_001204356,NM_001204353,NM_001204352,NM_001040159,NM_016950,NM_007193	chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4	-,-,-,-,-,-,-,-,-,-,+	SPOCK3,SPOCK3,SPOCK3,SPOCK3,SPOCK3,SPOCK3,SPOCK3,SPOCK3,SPOCK3,SPOCK3,ANXA10	339,339,339,339,339,339,175,339,339,339,858235
chr19:44283470-44284933	chr19	+	44283602	44284391	True	NM_181845,NM_002250	chr19,chr19	+,-	ZNF283,KCNN4	47081,1068
chr17:48844562-48845171	chr17	+	48844692	48845064	True	NR_024626,NM_016424	chr17,chr17	-,+	C17orf73,LUC7L3	-60,-47818
chr3:192626967-192627643	chr3	+	192627099	192627447	True	NM_020386,NM_178496	chr3,chr3	+,-	HRASLS,MB21D2	331470,8553
chr2:134321511-134323077	chr2	+	134321812	134323097	True	NM_207363,NM_207481,NR_037450	chr2,chr2,chr2	-,-,+	NCKAP5,NCKAP5,MIR3679	2985,2985,561598
chr3:9790194-9790715	chr3	+	9790249	9790511	True	NM_016826,NM_016827,NM_016820,NM_016821,NM_016828,NM_016829,NM_016819,NM_003656,NM_002542	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,+,+,+,-,+	OGG1,OGG1,OGG1,OGG1,OGG1,OGG1,OGG1,CAMK1,OGG1	1116,1116,1116,1116,1116,1116,1116,21207,1116
chr19:36504503-36504719	chr19	+	36504534	36504608	True	NM_198867,NM_032878,NM_001039876,NM_001042631	chr19,chr19,chr19,chr19	-,-,-,+	ALKBH6,ALKBH6,C19orf46,SDHAF1	583,583,-4862,-18495
chr1:21060844-21061313	chr1	+	21061148	21061264	True	NM_001103160,NM_001103161,NM_032409	chr1,chr1,chr1	-,-,+	SH2D5,SH2D5,PINK1	-2015,-2015,-101260
chr4:109578069-109579178	chr4	+	109578230	109579063	True	NR_026968,NM_021227	chr4,chr4	-,+	LOC285456,OSTC	-36617,-6544
chr3:56813611-56815433	chr3	+	56813965	56815077	True	NM_001128616,NR_024460	chr3,chr3	-,+	ARHGEF3,CCDC66	-4220,-222832
chr18:64273411-64275261	chr18	+	64273543	64274631	True	NM_004361,NM_021153	chr18,chr18	+,-	CDH7,CDH19	-855449,-2327
chr15:74905273-74906052	chr15	+	74905284	74905956	True	NM_001130028,NM_003992,NM_001142443	chr15,chr15,chr15	+,+,-	CLK3,CLK3,EDC3	1378,-4622,82480
chr19:38757953-38758410	chr19	+	38758149	38758403	True	NM_021102,NM_033256,NM_001166103	chr19,chr19,chr19	+,-,+	SPINT2,PPP1R14A,SPINT2	-3102,-10977,-3102
chr12:53231796-53232838	chr12	+	53231832	53232752	True	NM_199187,NM_175834	chr12,chr12	+,-	KRT18,KRT79	109902,-3755
chr17:44896384-44896629	chr17_ctg5_hap1	+	1663587	1663873	False	NR_033799,NM_016632	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	NSFP1,ARL17A	-138725,-149703
chr17:44896384-44896629	chr17	+	44896390	44896676	True	NM_003396,NM_030753	chr17,chr17	+,-	WNT9B,WNT3	32291,-308
chr11:10326340-10326547	chr11	+	10326346	10326532	True	NM_030962,NM_001124	chr11,chr11	-,+	SBF2,ADM	-10592,109
chr16:56668960-56669235	chr16	+	56668975	56669205	True	NR_003658,NR_036677,NM_176870,NM_175617,NM_005946,NM_005950,NR_027781	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,-,+	MT1DP,MT1JP,MT1M,MT1E,MT1A,MT1G,MT1DP	8510,445,-2492,-9441,3372,32822,8393
chr7:57657409-57658028	chr7	+	57657615	57657884	True	NR_030766,NM_001159279	chr7,chr7	-,+	LOC642006,ZNF716	-409752,-147783
chr19:58950133-58950819	chr19	+	58950464	58950814	True	NM_207395,NM_003433	chr19,chr19	+,-	ZNF324B,ZNF132	12156,825
chr17:47781928-47783655	chr17	+	47782473	47783604	True	NM_005827,NM_001199155	chr17,chr17	-,+	SLC35B1,MYST2	1728,82376
chr11:94277931-94278160	chr11	+	94277941	94278209	True	NM_005591,NM_002033	chr11,chr11	-,+	MRE11A,FUT4	-50901,-975
chr5:141274729-141276553	chr5	+	141274817	141276604	True	NR_033244,NM_001142603	chr5,chr5	-,+	LOC729080,KIAA0141	38,26780
chr7:131438992-131439384	chr7	+	131438997	131439081	True	NM_005397,NM_013255	chr7,chr7	-,+	PODXL,MKLN1	-197621,-426453
chrX:23354570-23355813	chrX	+	23354915	23355792	True	NM_173495,NM_001033583	chrX,chrX	+,-	PTCHD1,ACOT9	-1989,405672
chr17:29628485-29629186	chr17	+	29628485	29629224	True	NM_002544,NM_032932	chr17,chr17	-,+	OMG,RAB11FIP4	-4105,89417
chr7:5823686-5824306	chr7	+	5823704	5824133	True	NR_023382,NM_207111,NM_207116	chr7,chr7,chr7	+,-,-	ZNF815,RNF216,RNF216	38657,-2343,-2343
chr1:236274509-236275338	chr1	+	236274592	236275248	True	NM_002508,NM_003272	chr1,chr1	-,+	NID1,GPR137B	-46111,30583
chr15:79165235-79165478	chr15	+	79165356	79165476	True	NM_014272,NM_206839,NM_006791	chr15,chr15,chr15	-,+,+	ADAMTS7,MORF4L1,MORF4L1	-61583,-235,-235
chr7:30792823-30793461	chr7	+	30793016	30793478	True	NM_001202481,NM_006774,NR_037598,NM_001199219	chr7,chr7,chr7,chr7	-,+,+,+	CRHR2,INMT,INMT-FAM188B,INMT	-53297,-1326,-1326,-1326
chr3:158391459-158392797	chr3	+	158391593	158392685	True	NM_024996,NM_020169	chr3,chr3	+,-	GFM1,LXN	-29327,-1111
chr6:7398297-7399609	chr6	+	7398425	7399496	True	NM_205864,NM_031480,NM_001170692,NM_153005,NM_001170693	chr6,chr6,chr6,chr6,chr6	-,+,-,+,-	CAGE1,RIOK1,CAGE1,RIOK1,CAGE1	-8483,-8414,-8483,3383,-8483
chr20:60694985-60695527	chr20	+	60695069	60695540	True	NM_144703,NM_002792	chr20,chr20	+,-	LSM14B,PSMA7	1976,22984
chr4:5989624-5989845	chr4	+	5989623	5989861	True	NR_037863,NM_001014809	chr4,chr4	+,-	LOC285484,CRMP1	212598,-94838
chr16:28873048-28873442	chr16	+	28873105	28873423	True	NM_001145812,NM_001145797,NM_001145796,NM_001145795,NM_015503,NM_003321	chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,-	SH2B1,SH2B1,SH2B1,SH2B1,SH2B1,TUFM	1872,1654,1654,1654,1890,-15376
chr1:1210392-1210609	chr1	+	1210396	1210518	True	NR_037668,NM_194458,NM_194315,NM_194457,NM_001130413,NM_058167	chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,-,+,-	SCNN1D,UBE2J2,UBE2J2,UBE2J2,SCNN1D,UBE2J2	119,-1162,-1162,-1162,119,-1162
chr15:31126600-31127621	chr15	+	31126708	31127416	True	NM_017762,NM_001146095	chr15,chr15	-,+	MTMR10,FAN1	156441,68638
chr14:35010109-35011751	chr14	+	35010151	35011416	True	NM_018453,NR_002937	chr14,chr14	-,+	EAPP,C14orf19	-1208,397711
chr14:35010109-35011751	chr14	-	35030110	35031375	False	NM_018453,NR_002937	chr14,chr14	-,+	EAPP,C14orf19	-21167,377752
chr19:19428418-19429747	chr19	+	19428835	19429689	True	NM_172231,NM_015329	chr19,chr19	-,+	SUGP1,MAU2	1668,1940
chr12:131649412-131649640	chr12	+	131649431	131649657	True	NR_026670,NM_194356	chr12,chr12	+,-	LOC116437,STX2	10,-325620
chr12:131649412-131649640	chr12	-	131977437	131977645	False	NM_175066,NM_004592	chr12,chr12	-,+	DDX51,SFSWAP	651285,217989
chr14:102434989-102435445	chr14	+	102435173	102435352	True	NM_001376,NM_005348	chr14,chr14	+,-	DYNC1H1,HSP90AA1	-4359,118215
chr20:44564217-44564589	chr20	+	44564240	44564612	True	NM_022104,NM_182676	chr20,chr20	+,-	PCIF1,PLTP	-974,-23454
chr5:25238926-25239483	chr5	+	25239037	25239448	True	NR_037896,NM_020227	chr5,chr5	-,+	LOC340107,PRDM9	-398345,-1731367
chr19:51728618-51729103	chr19	+	51728632	51729134	True	NM_001177608,NM_001772,NM_001082618,NM_001163922	chr19,chr19,chr19,chr19	+,+,+,-	CD33,CD33,CD33,VSIG10L	-348,-348,-348,116294
chr20:45604408-45605115	chr20	+	45604526	45604986	True	NM_172110,NM_033550	chr20,chr20	+,-	EYA2,TP53RK	-81333,-286250
chr15:78797205-78797610	chr15	+	78797353	78797459	True	NM_001083612,NM_001166694,NM_001013619	chr15,chr15,chr15	+,-,+	AGPHD1,CHRNA3,AGPHD1	2446,116238,2446
chr1:157669276-157670284	chr1	+	157669311	157670212	True	NM_018240,NM_052939	chr1,chr1	+,-	KIRREL,FCRL3	292850,486
chr17:37354414-37354805	chr17	+	37354626	37354806	True	NM_199248,NM_000981,NM_000723,NM_199247	chr17,chr17,chr17,chr17	-,+,-,-	CACNB1,RPL19,CACNB1,CACNB1	-725,1729,-725,-725
chr9:132386231-132386489	chr9	+	132386372	132386486	True	NM_199350,NM_014064	chr9,chr9	-,+	C9orf50,METTL11A	-3317,1948
chr12:118869769-118870213	chr12	+	118869981	118870228	True	NM_022491,NM_016281	chr12,chr12	+,-	SUDS3,TAOK3	-55681,-59231
chr11:61586940-61588091	chr11	+	61587365	61588084	True	NM_013402,NM_004265,NR_031729	chr11,chr11,chr11	-,+,-	FADS1,FADS2,MIR1908	-2836,7628,-4653
chr15:55697414-55698153	chr15	+	55697911	55698054	True	NM_020739,NM_001198784,NM_001204451,NM_004748,NM_001204450	chr15,chr15,chr15,chr15,chr15	-,+,-,-,-	CCPG1,FLJ27352,CCPG1,CCPG1,CCPG1	2713,2668,2713,2579,2713
chr13:114320448-114320923	chr13	+	114320653	114320925	True	NM_000705,NM_002929	chr13,chr13	-,+	ATP4B,GRK1	-8140,671
chr6:99391168-99392060	chr6	+	99391526	99392099	True	NM_005604,NM_012160	chr6,chr6	+,-	POU3F2,FBXL4	-109007,3801
chr16:2688091-2688589	chr16	+	2688257	2688589	True	NR_024492,NM_031948	chr16,chr16	+,-	FLJ42627,PRSS27	393,82013
chr16:2688091-2688589	chr16	-	2611604	2611936	False	NR_036139,NM_031268	chr16,chr16	-,+	MIR3178,PDPK1	-29598,-23685
chr16:71392646-71392931	chr16	+	71392756	71392980	True	NM_007088,NR_027910,NM_018348,NM_001740	chr16,chr16,chr16,chr16	+,+,-,+	CALB2,CALB2,FTSJD1,CALB2	-191,-191,-69247,-191
chr19:12662259-12662494	chr19	+	12662409	12662483	True	NM_153358,NM_144976	chr19,chr19	+,-	ZNF791,ZNF564	59248,-53
chr11:61523649-61523890	chr11	+	61523691	61523893	True	NR_026882,NM_013279,NM_001127392	chr11,chr11,chr11	-,+,+	DKFZP434K028,C11orf9,C11orf9	1293,-881,-3621
chr8:145756367-145757854	chr8	+	145756450	145757860	True	NM_001001795,NM_001024678,NM_014665	chr8,chr8,chr8	-,-,+	C8orf82,LRRC24,LRRC14	-1992,-4034,-13138
chr2:242835584-242836327	chr2	+	242835778	242836186	True	NM_173821,NM_005018	chr2,chr2	+,-	C2orf85,PDCD1	-23949,-34720
chr22:51020195-51020713	chr22	+	51020229	51020643	True	NM_001145137,NM_001145136,NM_001145135,NM_001145134,NR_021492,NM_005198,NM_152245,NR_027928,NM_004377,NM_152246	chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22,chr22	-,-,-,-,+,-,-,-,-,-	CPT1B,CPT1B,CPT1B,CPT1B,LOC100144603,CHKB,CPT1B,CHKB-CPT1B,CPT1B,CPT1B	-3723,-3133,-3133,-3133,811,835,-3133,835,-3335,-3335
chr19:18635130-18636594	chr19	+	18635172	18636643	True	NM_001171948,NM_006532	chr19,chr19	+,-	C19orf50,ELL	31928,-2235
chr19:39110529-39111253	chr19	+	39110756	39111204	True	NM_013234,NM_007181,NM_001042600	chr19,chr19,chr19	+,-,-	EIF3K,MAP4K1,MAP4K1	-1085,-2113,-2113
chr2:218936979-218937980	chr2	+	218937027	218937979	True	NM_198483,NR_002712	chr2,chr2	+,-	RUFY4,CXCR2P1	-3340,-11014
chr5:175966164-175966410	chr5	+	175966177	175966355	True	NM_001171976,NM_014901,NM_017675	chr5,chr5,chr5	+,-,+	CDHR2,RNF44,CDHR2	3156,-1756,9987
chr1:43316392-43316817	chr1	+	43316394	43316794	True	NM_015911,NM_199342	chr1,chr1	+,-	ZNF691,CCDC23	-4171,-33335
chr1:90051290-90052947	chr1	+	90051744	90052793	True	NM_015350,NR_033981	chr1,chr1	+,-	LRRC8B,FLJ27354	-27523,45711
chr16:75018098-75018781	chr16	+	75018216	75018528	True	NM_030581,NM_032268	chr16,chr16	-,+	WDR59,ZNRF1	539,14386
chr11:129870924-129871700	chr11	+	129871123	129871653	True	NM_199437,NR_024233,NM_020228	chr11,chr11,chr11	-,+,-	PRDM10,NCRNA00167,PRDM10	1127,865,1127
chr2:207576980-207578443	chr2	+	207577112	207578479	True	NM_001093730,NM_001136193	chr2,chr2	-,+	DYTN,FASTKD2	4698,51632
chr12:120557131-120558029	chr12	+	120557230	120557918	True	NM_006861,NM_207311,NM_001167606	chr12,chr12,chr12	-,+,-	RAB35,CCDC64,RAB35	-2587,-129634,-2587
chrX:135251739-135252897	chrX	+	135251794	135252890	True	NM_001159704,NM_001173517,NM_001167819	chrX,chrX,chrX	+,-,+	FHL1,MAP7D3,FHL1	-390,80898,-49
chr16:57580721-57582347	chr16	+	57580964	57582358	True	NM_033212,NM_153837	chr16,chr16	-,+	CCDC102A,GPR114	-10487,-4427
chr17:4457131-4457932	chr17	+	4457310	4457960	True	NM_198501,NM_001122890,NM_014520,NM_153338,NM_001105538	chr17,chr17,chr17,chr17,chr17	+,-,-,-,-	SMTNL2,GGT6,MYBBP1A,GGT6,MYBBP1A	29315,5966,771,5966,771
chr9:96715610-96715958	chr9	+	96715655	96716001	True	NM_177995,NM_021570	chr9,chr9	+,-	PTPDC1,BARX1	77074,1657
chr22:30232291-30232640	chr22	+	30232387	30232545	True	NM_021090,NM_032204	chr22,chr22	+,-	MTMR3,ASCC2	46612,1765
chr1:183975024-183975438	chr1	+	183975038	183975412	True	NM_015101,NM_001127394	chr1,chr1	-,+	GLT25D2,TSEN15	31509,45398
chr6:90060959-90061853	chr6	+	90061160	90061869	True	NM_014942,NM_016021	chr6,chr6	+,-	ANKRD6,UBE2J1	81027,807
chr5:157878587-157879504	chr5	+	157878616	157879370	True	NM_014666,NM_173491	chr5,chr5	-,+	CLINT1,LSM11	-592433,-707912
chr11:8104763-8106263	chr11	+	8104846	8106294	True	NM_177972,NM_001135109	chr11,chr11	+,-	TUB,RIC3	-1988,84346
chr6:14864274-14865917	chr6	+	14864278	14865644	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	380882,797695
chr19:12271968-12272219	chr19	+	12271967	12272227	True	NM_003437,NR_037801,NR_037802,NM_145233	chr19,chr19,chr19,chr19	+,-,-,-	ZNF136,ZNF625,ZNF625-ZNF20,ZNF625	1644,-4421,-4421,-4421
chr1:117602703-117603020	chr1	+	117602762	117602930	True	NM_003594,NM_001145635	chr1,chr1	+,-	TTF2,TRIM45	18,61531
chr16:79753788-79755252	chr16	+	79754076	79755099	True	NM_005360,NM_130897	chr16,chr16	-,+	MAF,DYNLRB2	-119454,819754
chr17:72358423-72359426	chr17	+	72358546	72359254	True	NM_181790,NM_001080466	chr17,chr17	+,-	GPR142,BTBD17	4390,-588
chr1:111922421-111922822	chr1	+	111922619	111922771	True	NR_029429,NM_181643	chr1,chr1	-,+	PGCP1,C1orf88	9762,-33475
chr19:54467521-54468254	chr19	+	54467559	54468287	True	NM_198481,NM_031895	chr19,chr19	-,+	VSTM1,CACNG8	98970,-1320
chr17:10559321-10560551	chr17	+	10559338	10560473	True	NM_002470,NM_020233	chr17,chr17	-,+	MYH3,C17orf48	-39,40453
chr19:47853970-47855265	chr19	+	47854071	47855141	True	NM_001009813,NM_014681	chr19,chr19	-,+	MEIS3,DHX34	67694,-1585
chr3:196593921-196594629	chr3	+	196594140	196594612	True	NM_152699,NM_001042540	chr3,chr3	+,-	SENP5,NCBP2	114,74902
chr8:104513156-104513429	chr8	+	104513213	104513323	True	NM_001100117,NM_030780	chr8,chr8	+,-	RIMS2,SLC25A32	-288,-85745
chr7:753856-754542	chr7	+	754003	754551	True	NM_001164762,NM_001164761,NM_002735,NM_017802	chr7,chr7,chr7,chr7	-,-,-,+	PRKAR1B,PRKAR1B,PRKAR1B,HEATR2	-1426,-1159,-1842,11786
chr10:72575081-72575591	chr10	+	72575136	72575526	True	NM_003901,NM_152710	chr10,chr10	+,-	SGPL1,C10orf27	177,-29979
chr4:77019859-77020663	chr4	+	77020040	77020667	True	NM_001179,NM_017426	chr4,chr4	+,-	ART3,NUP54	-24246,49043
chr17:73399575-73399914	chr17	+	73399863	73399923	True	NR_037449,NM_002086,NM_203506	chr17,chr17,chr17	+,-,-	MIR3678,GRB2,GRB2	2226,1916,1917
chr11:119597530-119597920	chr11	+	119597579	119597969	True	NM_203286,NM_203285,NR_034160,NM_002855	chr11,chr11,chr11,chr11	-,-,+,-	PVRL1,PVRL1,LOC100499227,PVRL1	1516,1516,-345142,1516
chr8:121137323-121137843	chr8	+	121137479	121137837	True	NM_024094,NM_021110	chr8,chr8	-,+	DSCC1,COL14A1	-269309,-178
chr17:9809217-9809735	chr17	+	9809275	9809415	True	NM_004246,NM_002903	chr17,chr17	+,-	GLP2R,RCVRN	-79946,-591
chr20:16729552-16730424	chr20	+	16729665	16730405	True	NM_001199866,NM_020157	chr20,chr20	-,+	KIF16B,OTOR	-175586,-717
chr12:93475047-93476060	chr12	+	93475391	93476056	True	NM_019094,NM_003566	chr12,chr12	+,-	NUDT4,EEA1	295644,-152284
chr2:25016513-25016743	chr2	+	25016660	25016770	True	NM_001013663,NM_001199803,NM_024322	chr2,chr2,chr2	-,+,+	C2orf79,CENPO,CENPO	-409,-536,-380
chr20:46022700-46023570	chr20	+	46023195	46023340	True	NM_183048,NR_024594	chr20,chr20	-,+	ZMYND8,LOC100131496	-37721,-76002
chr11:17248774-17249389	chr11	+	17248862	17248998	True	NM_002645,NM_005013	chr11,chr11	-,+	PIK3C2A,NUCB2	-57508,49287
chr15:89440845-89441102	chr15	+	89440846	89441100	True	NM_178232,NM_013227	chr15,chr15	-,+	HAPLN3,ACAN	-2076,-94223
chr3:112000207-112000922	chr3	+	112000219	112000972	True	NM_183061,NM_001004196	chr3,chr3	-,+	SLC9A10,CD200	12157,50943
chr14:103997247-103997858	chr14	+	103997252	103997752	True	NM_152307,NM_001823	chr14,chr14	+,-	TRMT61A,CKB	-1794,-8082
chr20:48598556-48598838	chr20	+	48598578	48598814	True	NM_006038,NM_005985	chr20,chr20	-,+	SPATA2,SNAI1	-66498,698
chr9:108209527-108209782	chr9	+	108209628	108209782	True	NM_001145313,NM_031919,NM_207647,NM_005502	chr9,chr9,chr9,chr9	+,+,+,-	FSD1L,FSD1L,FSD1L,ABCA1	532,532,542,-519101
chr19:18449398-18449836	chr19	+	18449559	18449787	True	NM_017712,NM_012321	chr19,chr19	+,-	PGPEP1,LSM4	1620,-15558
chr17:38499855-38501082	chr17	+	38499922	38501122	True	NM_001024809,NM_152219	chr17,chr17	+,-	RARA,GJD3	-1702,19873
chr15:93447530-93447752	chr15	+	93447544	93447798	True	NM_001166286,NR_036136,NM_001271,NM_001042572	chr15,chr15,chr15,chr15	-,+,+,+	RGMA,MIR3175,CHD2,CHD2	168641,34,-4044,-4044
chr12:87136357-87137350	chr12	+	87136356	87137393	True	NM_006183,NM_013244	chr12,chr12	+,-	NTS,MGAT4C	-868342,95345
chr2:85788710-85789094	chr2	+	85788929	85789091	True	NM_003761,NM_001142269,NM_000821	chr2,chr2,chr2	+,-,-	VAMP8,GGCX,GGCX	15522,-272,-272
chr1:9715437-9716179	chr1	+	9715518	9716206	True	NR_027045,NM_005026	chr1,chr1	-,+	C1orf200,PIK3CD	-874,-3779
chr3:100213134-100215058	chr3	+	100213579	100215107	True	NM_014820,NM_018004	chr3,chr3	-,+	TOMM70A,TMEM45A	-93354,-2167
chr20:46991410-46992407	chr20	+	46991472	46992254	True	NR_026958,NM_020820	chr20,chr20	+,-	LOC284749,PREX1	-2869,452223
chr22:25092207-25092500	chr22	+	25092216	25092390	True	NR_024593,NR_024494	chr22,chr22	-,+	POM121L10P,BCRP3	-37102,-63385
chr6:5266986-5267841	chr6	+	5267241	5267518	True	NM_001164840,NM_006567,NM_020408,NM_001164841	chr6,chr6,chr6,chr6	-,+,-,-	LYRM4,FARS2,LYRM4,LYRM4	-6069,-5716,-6069,-6069
chr19:41510057-41511090	chr19	+	41510125	41510975	True	NM_030589,NM_000767	chr19,chr19	-,+	CYP2A7,CYP2B6	-121468,-12972
chr14:94759248-94759469	chr14	+	94759257	94759503	True	NM_001100607,NM_058237,NM_016186	chr14,chr14,chr14	-,+,-	SERPINA10,PPP4R4,SERPINA10	143,-118659,2
chr3:193965805-193966732	chr3	+	193966148	193966546	True	NR_024480,NM_005524	chr3,chr3	-,+	LOC100131551,HES1	64097,-112268
chrX:85439419-85439813	chrX	+	85439563	85439830	True	NM_053281,NM_001145414	chrX,chrX	+,-	DACH2,CHM	-36168,-136997
chr19:55720275-55720483	chr19	+	55720402	55720528	True	NM_032430,NM_001161440,NM_002842	chr19,chr19,chr19	+,-,-	BRSK1,PTPRH,PTPRH	75005,396,396
chr20:52789730-52789940	chr20	+	52789739	52789989	True	NM_002623,NM_001128915,NM_000782	chr20,chr20,chr20	+,-,-	PFDN4,CYP24A1,CYP24A1	34512,577,577
chr21:37851895-37852240	chr21	+	37851919	37852159	True	NM_005441,NM_144492,NM_001146079	chr21,chr21,chr21	+,-,-	CHAF1B,CLDN14,CLDN14	-94281,279,279
chrX:135290589-135291054	chrX	+	135290624	135291040	True	NM_001173517,NM_001159699	chrX,chrX	-,+	MAP7D3,FHL1	42748,-11620
chr1:17308961-17309663	chr1	+	17309476	17309654	True	NM_014675,NM_002403,NM_001135248,NM_001135247,NM_017459	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	CROCC,MFAP2,MFAP2,MFAP2,MFAP2	-61084,-2303,-2303,-1395,-1395
chr1:204914958-204915499	chr1	+	204915080	204915490	True	NM_203376,NM_001160331	chr1,chr1	-,+	TMEM81,NFASC	138148,-1777
chr1:120835540-120836077	chr1	+	120835583	120835977	True	NM_001004340,NM_001100910	chr1,chr1	-,+	FCGR1B,FAM72B	100017,3027
chr1:120835540-120836077	chr1	-	143916140	143916534	False	NM_207418,NR_034178	chr1,chr1	-,+	FAM72D,SRGAP2P2	-2997,-443
chr1:120835540-120836077	chr1	+	206135066	206135460	False	NM_001123168,NM_001007544	chr1,chr1	+,-	FAM72A,C1orf186	3450,153237
chr11:125708243-125709700	chr11	+	125708313	125709401	True	NM_001144874,NM_212555	chr11,chr11	+,-	PATE4,PATE2	-5154,-59599
chr18:56333357-56334353	chr18	+	56333521	56334259	True	NM_006785,NM_052947,NM_173844	chr18,chr18,chr18	+,-,+	MALT1,ALPK2,MALT1	4358,-37332,4358
chr2:27072062-27072294	chr2	+	27072098	27072275	True	NM_020134,NM_001029881	chr2,chr2	+,-	DPYSL5,CIB4	-1180,-207887
chr15:89761662-89762092	chr15	+	89761668	89762124	True	NM_001113378,NM_000326	chr15,chr15	+,-	FANCI,RLBP1	25069,2848
chr21:19252565-19254217	chr21	+	19252798	19253993	True	NM_001204175,NR_024354	chr21,chr21	+,-	CHODL,NCRNA00157	35663,3982
chr4:154625000-154625272	chr4	+	154625000	154625330	True	NM_173662,NM_003264	chr4,chr4	-,+	RNF175,TLR2	56116,-19619
chr17:66032346-66034183	chr17	+	66032431	66033818	True	NM_002266,NM_181656	chr17,chr17	+,-	KPNA2,C17orf58	-634,-42666
chr19:38878598-38878850	chr19	+	38878813	38878877	True	NM_001042522,NM_152657,NM_001039616	chr19,chr19,chr19	+,-,+	SPRED3,GGN,SPRED3	2061,-145,2061
chr17:69619236-69620215	chr17	+	69619428	69619910	True	NM_000346,NR_036488	chr17,chr17	+,-	SOX9,LOC100499467	497250,969083
chr10:38145979-38146328	chr10	+	38145997	38146257	True	NM_021045,NM_006954	chr10,chr10	-,+	ZNF248,ZNF33A	279,153320
chr3:48630577-48632248	chr3	+	48630676	48632122	True	NM_000094,NM_033629	chr3,chr3	-,+	COL7A1,TREX1	521,-123498
chr12:49581032-49581274	chr12	+	49581075	49581330	True	NM_006009,NM_032704	chr12,chr12	-,+	TUBA1A,TUBA1C	1588,77534
chr20:49536293-49536535	chr20	+	49536296	49536538	True	NM_015339,NM_014484	chr20,chr20	-,+	ADNP,MOCS3	11039,38824
chr19:18682866-18683230	chr19	+	18682999	18683098	True	NM_012181,NM_001033930,NM_003333	chr19,chr19,chr19	-,+,+	FKBP8,UBA52,UBA52	-28616,-436,-436
chr2:176968742-176969381	chr2	+	176968906	176969398	True	NM_001080458,NM_021192,NM_021193	chr2,chr2,chr2	-,+,+	EVX2,HOXD11,HOXD12	-20216,2685,-4427
chr5:40843062-40845060	chr5	+	40843167	40844727	True	NM_032587,NM_000997	chr5,chr5	+,-	CARD6,RPL37	-1808,-7780
chr19:752446-752709	chr19	+	752697	752757	True	NM_214710,NM_173481	chr19,chr19	-,+	PRSS57,C19orf21	-57236,-1602
chr20:3220983-3221262	chr20	+	3220983	3221257	True	NM_001174090,NM_001174089,NM_032034,NM_181493	chr20,chr20,chr20,chr20	-,-,-,+	SLC4A11,SLC4A11,SLC4A11,ITPA	-2148,-1096,-2610,-30978
chr21:34866668-34867870	chr21	+	34866816	34867919	True	NM_032195,NM_001040192,NM_017833	chr21,chr21,chr21	+,-,-	SON,DNAJC28,DNAJC28	47430,-2793,-3026
chr5:36283425-36284176	chr5	+	36283579	36284085	True	NM_032637,NM_001161429	chr5,chr5	+,-	SKP2,RANBP3L	-131451,17978
chr11:13301001-13302686	chr11	+	13301419	13302713	True	NM_001030273,NM_001030272,NM_001178,NM_032320	chr11,chr11,chr11,chr11	+,+,+,-	ARNTL,ARNTL,ARNTL,BTBD10	-2145,-2145,-2145,182175
chr17:33760281-33760636	chr17	+	33760280	33760650	True	NR_003037,NM_018042	chr17,chr17	+,-	SNORD7,SLFN12	140025,-737
chr3:184097228-184097430	chr3	+	184097244	184097458	True	NM_001177598,NM_003741,NM_000460,NM_001177597	chr3,chr3,chr3,chr3	-,+,-,-	THPO,CHRD,THPO,THPO	-1312,402,-1312,-1312
chr1:50513449-50513815	chr1	+	50513453	50513677	True	NM_032785,NM_001144777	chr1,chr1	-,+	AGBL4,ELAVL4	-23827,8
chr8:125385394-125385863	chr8	+	125385502	125385894	True	NM_017956,NM_194291	chr8,chr8	+,-	TRMT12,TMEM65	77153,-562
chr3:42844924-42845125	chr3	+	42844978	42845131	True	NM_001296,NM_001099669,NM_001099668,NM_014056	chr3,chr3,chr3,chr3	+,-,-,-	CCBP2,HIGD1A,HIGD1A,HIGD1A	5832,947,854,947
chr2:113990076-113990923	chr2	+	113990201	113990898	True	NR_015377,NM_003466	chr2,chr2	+,-	LOC654433,PAX8	2947,45650
chr5:104434203-104435060	chr5	+	104434413	104435091	True	NR_000039,NM_031438	chr5,chr5	+,-	RAB9BP1,NUDT12	83,-1535923
chr13:49969462-49970698	chr13	+	49969704	49970371	True	NM_031915,NM_030925	chr13,chr13	+,-	SETDB2,CAB39L	48057,5423
chr1:120436582-120436832	chr1	+	120436596	120436867	True	NM_021794,NM_006623	chr1,chr1	-,+	ADAM30,PHGDH	2333,-182234
chr1:178488234-178490057	chr1	+	178488397	178489961	True	NM_001170724,NM_032126,NM_001170722,NM_001170723,NM_004673	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	C1orf49,C1orf49,C1orf49,C1orf49,ANGPTL1	-6236,-6236,-6236,-6236,350304
chr6:34434750-34435426	chr6	+	34434807	34435333	True	NM_001204091,NM_020804	chr6,chr6	-,+	RPS10,PACSIN1	-40905,-1005
chr19:50473317-50473563	chr19	+	50473389	50473458	True	NM_001135163,NM_052884,NR_002825	chr19,chr19,chr19	-,-,+	SIGLEC11,SIGLEC11,SIGLEC16	-8960,-8960,-536
chr4:122854403-122855986	chr4	+	122854493	122855820	True	NM_003305,NM_005033	chr4,chr4	-,+	TRPC3,EXOSC9	-225,-132073
chr17:17936402-17938397	chr17	+	17936765	17938282	True	NM_024052,NM_145691	chr17,chr17	+,-	C17orf39,ATPAF2	4328,4255
chr20:2087980-2089078	chr20	+	2087979	2088719	True	NM_080836,NM_024411	chr20,chr20	+,-	STK35,PDYN	-5503,-113048
chr3:122234522-122235082	chr3	+	122234582	122235099	True	NM_002264,NM_138287,NR_026698	chr3,chr3,chr3	-,+,-	KPNA1,DTX3L,KPNA1	-796,48085,-796
chr13:111567035-111567290	chr13	+	111567040	111567254	True	NM_017664,NM_005537	chr13,chr13	-,+	ANKRD10,ING1	212,-199732
chr3:118923643-118924373	chr3	+	118923777	118924282	True	NM_006952,NM_003778	chr3,chr3	+,-	UPK1B,B4GALT4	-31404,35521
chr1:40134878-40135345	chr1	+	40134938	40135142	True	NM_203456,NM_032526	chr1,chr1	+,-	PPIE,NT5C1A	69374,2618
chr22:19418193-19418447	chr22	+	19418218	19418410	True	NM_003776,NM_003325	chr22,chr22	+,-	MRPL40,HIRA	1625,859
chr15:101080603-101081531	chr15	+	101080857	101081451	True	NM_024708,NM_178842	chr15,chr15	+,-	ASB7,LASS3	61303,3524
chr19:49248790-49249075	chr19	+	49248892	49249056	True	NM_019113,NM_000148,NM_017805,NM_182575	chr19,chr19,chr19,chr19	+,-,-,-	FGF21,FUT1,RASIP1,IZUMO1	10287,9641,-4922,1160
chr2:216970986-216971872	chr2	+	216971147	216971541	True	NM_018441,NM_021141	chr2,chr2	-,+	PECR,XRCC5	-24608,2478
chr15:52971829-52972037	chr15	+	52971834	52971898	True	NM_002748,NM_019600	chr15,chr15	+,-	MAPK6,KIAA1370	-660474,-1014
chr14:64686535-64687386	chr14	+	64686545	64687225	True	NM_182910,NM_182913,NM_001040275	chr14,chr14,chr14	+,+,-	SYNE2,SYNE2,ESR2	-3925,-5738,73953
chr17:21030767-21031934	chr17	+	21030817	21031456	True	NM_015276,NM_015510	chr17,chr17	-,+	USP22,DHRS7B	-84465,-610
chr10:72161050-72161655	chr10	+	72161190	72161390	True	NM_018239,NM_004096	chr10,chr10	-,+	LRRC20,EIF4EBP2	-18808,2470
chr5:134734695-134734896	chr5	+	134734778	134734944	True	NM_138609,NM_138610,NM_004893,NM_001040158,NM_178019	chr5,chr5,chr5,chr5,chr5	-,-,-,-,+	H2AFY,H2AFY,H2AFY,H2AFY,CATSPER3	34,34,683,34,-431233
chr20:34202510-34202946	chr20	+	34202594	34202752	True	NR_024377,NM_003116	chr20,chr20	-,+	FER1L4,SPAG4	-7110,1056
chr20:62583944-62584322	chr20	+	62584199	62584277	True	NM_017859,NM_001193379,NR_027287	chr20,chr20,chr20	-,-,+	UCKL1,UCKL1,UCKL1-AS1	3573,-1672,459
chr11:116967976-116968414	chr11	+	116968027	116968341	True	NM_025164,NM_002572	chr11,chr11	-,+	SIK3,PAFAH1B2	702,46658
chr3:11684569-11684785	chr3	+	11684638	11684796	True	NM_001128219,NM_003178	chr3,chr3	-,+	VGLL4,SYN2	652,361065
chr11:118661199-118661462	chr11	+	118661310	118661374	True	NM_001716,NM_004397	chr11,chr11	+,-	CXCR5,DDX6	93166,648
chr19:16177647-16177986	chr19	+	16177651	16177845	True	NM_001145160,NM_003290,NM_054113	chr19,chr19,chr19	+,+,-	TPM4,TPM4,CIB3	471,9289,106497
chr22:46443048-46443946	chr22	+	46443171	46443709	True	NM_018280,NR_027034,NR_027036	chr22,chr22,chr22	-,+,-	C22orf26,LOC150381,LOC100271722	6365,6016,-2423
chr12:113798087-113798619	chr12	+	113798089	113798431	True	NM_001159727,NM_173542,NM_024959	chr12,chr12,chr12	+,+,-	PLBD2,PLBD2,SLC24A6	-1769,-1769,-25164
chr4:6385799-6386819	chr4	+	6385980	6386834	True	NM_006005,NM_181876	chr4,chr4	+,-	WFS1,PPP2R2C	-114463,-2383
chr4:170154478-170155226	chr4	+	170154841	170155234	True	NM_020870,NM_001829	chr4,chr4	-,+	SH3RF1,CLCN3	37066,386487
chr11:65815186-65815815	chr11	+	65815250	65815806	True	NM_033036,NM_006842	chr11,chr11	-,+	GAL3ST3,SF3B2	895,4009
chr3:189527850-189528110	chr3	+	189527876	189528140	True	NR_030642,NM_018192	chr3,chr3	+,-	MIR944,LEPREL1	19570,310818
chr1:174841936-174842365	chr1	+	174841958	174842144	True	NM_001035230,NM_022100	chr1,chr1	+,-	RABGAP1L,MRPS14	2539,150497
chr6:151773157-151773407	chr6	+	151773165	151773455	True	NM_017909,NM_024573	chr6,chr6	-,+	RMND1,C6orf211	3,28
chr4:71058992-71059986	chr4	+	71058998	71060019	True	NM_001891,NM_017855	chr4,chr4	-,+	CSN2,ODAM	-232272,2224
chr19:10680653-10680945	chr19	+	10680860	10680944	True	NM_079421,NM_023008,NR_031603,NM_001800	chr19,chr19,chr19,chr19	-,-,+,-	CDKN2D,KRI1,MIR1238,CDKN2D	-1205,-4158,-18113,-1229
chr11:111784372-111784845	chr11	+	111784388	111784844	True	NR_037651,NM_001885,NM_080659,NM_001541	chr11,chr11,chr11,chr11	+,-,+,+	HSPB2-C11ORF52,CRYAB,C11orf52,HSPB2	-979,-1915,4756,-979
chr9:108422005-108423177	chr9	+	108422012	108423177	True	NM_005502,NM_005421	chr9,chr9	-,+	ABCA1,TAL2	-731485,1560
chr5:170848079-170848486	chr5	+	170848114	170848529	True	NM_003862,NR_037474	chr5,chr5	+,-	FGF18,MIR3912	-1498,-34350
chr7:66823510-66824993	chr7	+	66823513	66825004	True	NM_022906,NR_022007	chr7,chr7	+,-	STAG3L4,PMS2P4	-55950,-56107
chr3:48231453-48231982	chr3	+	48231667	48232023	True	NM_001789,NM_004345,NM_201567	chr3,chr3,chr3	-,+,-	CDC25A,CAMP,CDC25A	-1866,32838,-1866
chr14:103058489-103058760	chr14	+	103058504	103058758	True	NM_152326,NM_015156	chr14,chr14	-,+	ANKRD9,RCOR1	-82376,474
chr2:190624065-190625021	chr2	+	190624283	190624424	True	NM_022353,NM_000534	chr2,chr2	-,+	OSGEPL1,PMS1	3559,24386
chr7:108635929-108637101	chr7	+	108636260	108637071	True	NM_001024607,NM_012328	chr7,chr7	-,+	C7orf66,DNAJB9	-111623,-426128
chr14:45756642-45757416	chr14	+	45756778	45757463	True	NM_018353,NM_020937	chr14,chr14	-,+	MIS18BP1,FANCM	-34173,-151702
chr2:237476889-237477203	chr2	+	237476891	237477167	True	NM_020311,NM_024726	chr2,chr2	+,-	CXCR7,IQCA1	1212,-60799
chrX:131350269-131351430	chrX	+	131350469	131351320	True	NM_021183,NM_001042452	chrX,chrX	-,+	RAP2C,MST4	919,-192891
chr17:67003599-67005496	chr17	+	67003681	67005507	True	NM_007168,NM_080283,NM_002758	chr17,chr17,chr17	-,-,+	ABCA8,ABCA9,MAP2K6	-52148,51679,405330
chr1:224622780-224623060	chr1	+	224622958	224623056	True	NM_001115113,NM_014184,NM_025160	chr1,chr1,chr1	-,+,-	WDR26,CNIH4,WDR26	-957,-78414,-957
chr7:65339514-65340495	chr7	+	65339858	65340296	True	NM_000181,NM_173517	chr7,chr7	-,+	GUSB,VKORC1L1	107067,-1670
chr3:164911541-164911937	chr3	+	164911686	164911888	True	NM_001122752,NM_014926	chr3,chr3	+,-	SERPINI1,SLITRK3	2541543,2631
chr13:76118753-76119796	chr13	+	76119100	76119515	True	NM_203497,NM_203495,NM_006002	chr13,chr13,chr13	-,-,+	COMMD6,COMMD6,UCHL3	-7109,-7109,4411
chr6:43423430-43423851	chr6	+	43423478	43423849	True	NM_023932,NM_206539,NM_001146016	chr6,chr6,chr6	-,-,+	DLK2,DLK2,TJAP1	-192,10,21411
chr8:63937738-63938021	chr8	+	63937765	63938045	True	NR_027378,NM_003878	chr8,chr8	+,-	LOC643763,GGH	-47407,13615
chr10:23384745-23384991	chr10	+	23384794	23384913	True	NM_012228,NM_153714	chr10,chr10	+,-	MSRB2,C10orf67	-418,248916
chr20:47542256-47544147	chr20	+	47542358	47543638	True	NM_006420,NM_020820	chr20,chr20	+,-	ARFGEF2,PREX1	-4141,-97938
chr3:187389125-187390263	chr3	+	187389155	187389975	True	NM_001048,NR_034062	chr3,chr3	-,+	SST,LOC100131635	-954,30178
chr2:115204084-115204865	chr2	+	115204174	115204595	True	NR_034130,NM_020868	chr2,chr2	-,+	LOC100499194,DPP10	-466613,-4332
chr14:51951456-51952843	chr14	+	51951733	51952746	True	NM_001042481,NR_037676	chr14,chr14	+,-	FRMD6,C14orf82	3108,165771
chr7:102200992-102201633	chr7	+	102201103	102201391	True	NM_001031618,NM_001166339,NM_001097615	chr7,chr7,chr7	+,+,-	SPDYE2,SPDYE2L,POLR2J3	-9475,-9475,11727
chr7:102200992-102201633	chr7	-	101988772	101988872	False	NM_024653,NM_001146210	chr7,chr7	+,-	PRKRIP1,SPDYE6	47931,8067
chr7:102200992-102201633	chr7	+	102300193	102300481	False	NM_032959,NM_001031618,NM_001166339	chr7,chr7,chr7	-,+,+	POLR2J2,SPDYE2,SPDYE2L	11751,-9472,-9472
chr4:70467107-70468640	chr4	+	70467134	70468365	True	NM_001105677,NM_053039	chr4,chr4	-,+	UGT2A2,UGT2B28	37027,-320969
chr6:149868263-149869136	chr6	+	149868361	149868837	True	NM_139126,NM_138785	chr6,chr6	-,+	PPIL4,C6orf72	-1190,18690
chr1:24646146-24647155	chr1	+	24646164	24647192	True	NM_198173,NM_021180,NM_001195010,NM_001199013,NM_198174	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	GRHL3,GRHL3,GRHL3,C1orf201,GRHL3	-403,2337,-159,93120,-403
chr12:48211249-48211947	chr12	+	48211500	48211926	True	NM_015401,NM_017842,NM_001098416	chr12,chr12,chr12	-,+,-	HDAC7,SLC48A1,HDAC7	1887,-44584,1887
chr7:156805638-156806460	chr7	+	156805655	156806402	True	NM_005515,NM_138400,NM_001165255	chr7,chr7,chr7	-,+,-	MNX1,NOM1,MNX1	-2308,-63290,-3526
chr7:3339236-3339507	chr7	+	3339379	3339553	True	NM_152744,NM_032415	chr7,chr7	+,-	SDK1,CARD11	1526,-255870
chr2:24150310-24150645	chr2	+	24150386	24150630	True	NM_181713,NM_017552	chr2,chr2	+,-	UBXN2A,ATAD2B	12745,-452
chr4:22749897-22751579	chr4	+	22749896	22751253	True	NM_145290,NM_020973	chr4,chr4	-,+	GPR125,GBA3	-232224,-55402
chr15:33602815-33603193	chr15	+	33602917	33603197	True	NM_001036,NM_001103184	chr15,chr15	+,-	RYR3,FMN1	-21,-242832
chr22:46410892-46412334	chr22	+	46410914	46411950	True	NR_027036,NR_027240	chr22,chr22	-,+	LOC100271722,LOC730668	28848,-8469
chr12:93092953-93093747	chr12	+	93093163	93093537	True	NM_001178097,NM_001037671,NM_003566	chr12,chr12,chr12	+,+,-	C12orf74,C12orf74,EEA1	3081,3081,229628
chr16:3452751-3454577	chr16	+	3452893	3454360	True	NM_017810,NM_001032292,NM_003450	chr16,chr16,chr16	-,+,+	ZNF434,ZNF174,ZNF174	-1868,-1754,-1754
chr10:45871698-45872344	chr10	+	45871723	45872318	True	NM_001004297,NM_000698	chr10,chr10	-,+	OR13A1,ALOX5	-60667,-2145
chr7:56160056-56160330	chr7	+	56160244	56160366	True	NM_015411,NM_006213	chr7,chr7	+,-	SUMF2,PHKG1	-28378,373
chr18:34507890-34509200	chr18	+	34507890	34509157	True	NM_020776,NM_015476	chr18,chr18	+,-	KIAA1328,C18orf10	-98861,-98732
chr9:46380878-46381854	chr9	+	46380878	46381692	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2750148,305873
chr9:46380878-46381854	chr9	-	46122616	46123430	False	NM_001145196,NR_024060	chr9,chr9	-,+	FAM75A6,FAM27A	-2491886,-395638
chr8:87082856-87083276	chr8	+	87082865	87083218	True	NM_152565,NM_033126	chr8,chr8	+,-	ATP6V0D2,PSKH2	27920,-1014
chr19:7951480-7951873	chr19	+	7951491	7951575	True	NM_025061,NR_033250	chr19,chr19	+,-	LRRC8E,LOC388499	1814,-6374
chr19:927985-928269	chr19	+	928071	928293	True	NM_138774,NM_005224	chr19,chr19	-,+	C19orf22,ARID3A	-14846,-2085
chr3:50602957-50603199	chr3	+	50602964	50603206	True	NM_016173,NM_001171743,NM_016210,NM_001171741,NM_001171740	chr3,chr3,chr3,chr3,chr3	+,-,-,-,-	HEMK1,C3orf18,C3orf18,C3orf18,C3orf18	3702,2067,2067,5302,2067
chr2:105658663-105660131	chr2	+	105658710	105660040	True	NR_037883,NM_182640	chr2,chr2	-,+	LOC100506421,MRPS9	-190776,-4278
chr1:156893012-156893440	chr1	+	156893017	156893319	True	NM_144702,NR_030527	chr1,chr1	+,-	LRRC71,MIR765	-2644,12767
chr6:13818277-13818726	chr6	+	13818276	13818708	True	NM_001165034,NM_001031713	chr6,chr6	+,-	RNF182,CCDC90A	105968,-3487
chr12:95866730-95867346	chr12	+	95866842	95867342	True	NM_006838,NM_001042403	chr12,chr12	+,-	METAP2,USP44	479,75328
chr1:212588209-212590029	chr1	+	212588500	212589750	True	NM_018252,NM_001198862,NM_013349	chr1,chr1,chr1	-,-,+	TMEM206,TMEM206,NENF	-233,-257,16478
chr15:75659953-75660486	chr15	+	75659982	75660338	True	NM_006715,NM_024608	chr15,chr15	-,+	MAN2C1,NEIL1	653,-20702
chr12:16067868-16069475	chr12	+	16067960	16069350	True	NM_004447,NM_015954	chr12,chr12	-,+	EPS8,DERA	-125450,-3826
chr8:32510729-32512198	chr8	+	32510949	32511714	True	NM_013959,NM_032664	chr8,chr8	+,-	NRG1,FUT10	-6749,819007
chr2:219522445-219522982	chr2	+	219522498	219522772	True	NM_001105537,NM_004328,NM_001079866	chr2,chr2,chr2	-,+,+	ZNF142,BCS1L,BCS1L	1545,1606,1606
chr17:5385260-5385661	chr17	+	5385314	5385700	True	NM_016041,NM_024039	chr17,chr17	-,+	DERL2,MIS12	3844,4546
chr19:7733580-7733869	chr19	+	7733627	7733813	True	NM_020415,NM_174918,NM_001193374,NM_002002	chr19,chr19,chr19,chr19	+,+,+,-	RETN,C19orf59,RETN,FCER2	158,8129,158,33269
chr1:243989023-243989356	chr1	+	243989022	243989249	True	NM_181690,NR_033883	chr1,chr1	-,+	AKT3,LOC339529	17354,91454
chr17:48291096-48291685	chr17	+	48291370	48291444	True	NM_001135697,NM_000088	chr17,chr17	+,-	SGCA,COL1A1	-48055,-12370
chr17:42145881-42146287	chr17	+	42145971	42146297	True	NR_028581,NR_028582,NM_138387,NM_152344	chr17,chr17,chr17,chr17	+,+,+,-	G6PC3,G6PC3,G6PC3,LSM12	1800,1800,1800,-984
chr18:12374779-12375703	chr18	+	12375079	12375241	True	NM_006796,NM_001142405	chr18,chr18	-,+	AFG3L2,SLMO1	2084,32653
chr16:21702308-21703428	chr16	+	21702795	21703208	True	NM_001161683,NM_005849	chr16,chr16	+,-	OTOA,IGSF6	-7100,-38823
chr8:28348598-28348942	chr8	+	28348597	28348782	True	NM_017412,NM_172366,NM_145866	chr8,chr8,chr8	+,-,+	FZD3,FBXO16,FZD3	2939,-813,2939
chr14:23506205-23506754	chr14	+	23506273	23506499	True	NM_001144932,NM_001099780,NM_002797,NM_001130725	chr14,chr14,chr14,chr14	-,+,-,-	PSMB5,PSMB11,PSMB5,PSMB5	-1919,4876,-1919,-1844
chr16:48420842-48421818	chr16	+	48420938	48421655	True	NM_003031,NM_031490	chr16,chr16	-,+	SIAH1,LONP2	-1709,-142780
chr7:35294520-35295105	chr7	+	35294625	35295133	True	NM_001166220,NM_001077653,NM_001011553	chr7,chr7,chr7	-,-,+	TBX20,TBX20,SEPT7	-914,-914,545493
chr15:45425993-45426346	chr15	+	45426072	45426274	True	NM_144565,NM_175940,NM_017434	chr15,chr15,chr15	-,+,+	DUOXA1,DUOX1,DUOX1	-4015,-3931,-3931
chr7:100881177-100881694	chr7	+	100881330	100881470	True	NM_014343,NM_006349,NM_016068,NM_001185080	chr7,chr7,chr7,chr7	-,+,-,-	CLDN15,ZNHIT1,FIS1,CLDN15	-103,-20396,6951,681
chr5:59819228-59820005	chr5	+	59819329	59819881	True	NR_028509,NM_001165899	chr5,chr5	+,-	PART1,PDE4D	-35622,-35404
chr7:150439302-150439551	chr7	+	150439306	150439528	True	NM_001162367,NM_001101311,NM_018384	chr7,chr7,chr7	+,-,+	LOC100128542,TMEM176B,GIMAP5	7295,58143,-4921
chr7:21468160-21469470	chr7	+	21468602	21469500	True	NM_003112,NM_001127370	chr7,chr7	+,-	SP4,CDCA7L	-970,516092
chr9:127623680-127623940	chr9	+	127623684	127623860	True	NM_007209,NM_030978,NM_001045476	chr9,chr9,chr9	-,+,+	RPL35,ARPC5L,WDR38	430,7623,-7980
chr3:163719920-163720294	chr3	+	163720190	163720310	True	NM_001080440,NR_033945	chr3,chr3	+,-	OTOL1,LOC647107	-2505645,-699101
chr2:232357039-232357486	chr2	+	232357234	232357299	True	NR_024079,NM_145236	chr2,chr2	-,+	C2orf52,B3GNT7	21806,-96956
chr21:46794127-46795783	chr21	+	46794542	46795710	True	NM_130445,NR_028082	chr21,chr21	+,-	COL18A1,NCRNA00175	29386,49295
chr10:124221905-124222163	chr10	+	124222015	124222169	True	NM_001099667,NM_001010912,NM_002775	chr10,chr10,chr10	+,-,+	ARMS2,C10orf120,HTRA1	-7887,237219,-1025
chr4:89205455-89205781	chr4	+	89205459	89205749	True	NM_001165136,NM_152542	chr4,chr4	+,-	HERC6,PPM1K	94141,189
chr12:123010662-123011411	chr12	+	123010708	123011408	True	NR_036436,NM_014708,NR_036434,NR_036435,NM_023012	chr12,chr12,chr12,chr12,chr12	-,+,-,-,-	RSRC2,KNTC1,RSRC2,RSRC2,RSRC2	202,400,202,202,202
chr3:101697336-101698731	chr3	+	101697347	101698747	True	NR_026934,NM_000986	chr3,chr3	+,-	LOC152225,RPL24	-37698,-291784
chr6:4836426-4837789	chr6	+	4836461	4837668	True	NM_001143970,NM_006638	chr6,chr6	+,-	CDYL,RPP40	-185,166659
chr10:959602-960663	chr10	+	959955	960315	True	NM_015155,NM_012341	chr10,chr10	-,+	LARP4B,GTPBP4	-28253,74033
chr8:21964207-21965815	chr8	+	21964379	21965313	True	NM_024815,NM_022749	chr8,chr8	-,+	NUDT18,FAM160B2	1669,-17716
chr9:843220-844879	chr9	+	843265	844672	True	NM_021951,NM_152569	chr9,chr9	+,-	DMRT1,C9orf66	-1626,-627372
chr7:132769286-132770956	chr7	+	132769569	132770779	True	NM_001037126,NM_017812	chr7,chr7	+,-	EXOC4,CHCHD3	167043,-2741
chrX:51811783-51812035	chrX	+	51811846	51812018	True	NM_001098800,NM_177537,NM_177535,NR_003712,NM_030801,NR_003711	chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,+,-,-	MAGED4,MAGED4B,MAGED4B,SNORA11E,MAGED4B,SNORA11D	311,400,400,-5454,400,-5277
chrX:51811783-51812035	chrX	-	51928268	51928440	False	NM_001098800,NM_177537,NM_177535,NR_003712,NM_030801,NR_003711	chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,-,+,+	MAGED4,MAGED4B,MAGED4B,SNORA11E,MAGED4B,SNORA11D	-311,-400,-400,5454,-400,5277
chr16:2770301-2770678	chr16	+	2770312	2770522	True	NM_016333,NM_031948	chr16,chr16	+,-	SRRM2,PRSS27	31807,80
chr10:99206770-99207504	chr10	+	99206850	99207276	True	NM_016046,NM_032327,NM_198043,NM_198045,NM_198044,NM_198046	chr10,chr10,chr10,chr10,chr10,chr10	-,+,+,+,+,+	EXOSC1,ZDHHC16,ZDHHC16,ZDHHC16,ZDHHC16,ZDHHC16	-1082,-971,-971,-971,-971,-954
chr18:13007099-13008561	chr18	+	13007176	13008535	True	NM_002828,NM_032142	chr18,chr18	-,+	PTPN2,CEP192	-122842,-15866
chr6:106554697-106554928	chr6	+	106554774	106554930	True	NM_182907,NM_004849	chr6,chr6	+,-	PRDM1,ATG5	-8010,218815
chr12:106642327-106642896	chr12	+	106642334	106642836	True	NM_006825,NM_152772	chr12,chr12	-,+	CKAP4,TCP11L2	-621,53744
chr4:53511314-53512441	chr4	+	53511468	53512380	True	NR_024031,NM_001134223	chr4,chr4	+,-	KIAA0114,USP46	66240,10429
chr21:47519408-47520421	chr21	+	47519439	47520406	True	NM_001849,NM_058174,NM_058175,NM_006657	chr21,chr21,chr21,chr21	+,+,+,-	COL6A2,COL6A2,COL6A2,FTCD	-1457,-1457,-1457,55132
chr6:39895626-39896062	chr6	+	39895625	39895845	True	NM_001075098,NR_033233,NM_005943,NM_015345	chr6,chr6,chr6,chr6	-,-,-,+	MOCS1,MOCS1,MOCS1,DAAM2	6495,6495,-170,-134903
chr17:54669672-54670066	chr17	+	54669674	54669904	True	NM_001085430,NM_005450	chr17,chr17	-,+	C17orf67,NOG	223396,1155
chr6:44280214-44280889	chr6	+	44280217	44280843	True	NM_145026,NM_020745	chr6,chr6	+,-	SPATS1,AARS2	29553,270
chr14:21510477-21511157	chr14	+	21510487	21511111	True	NM_001012264,NM_032572	chr14,chr14	-,+	RNASE13,RNASE7	-7543,-153
chr10:21466617-21467392	chr10	+	21466769	21467434	True	NM_001173484,NM_001195627,NM_213569	chr10,chr10,chr10	-,+,-	NEBL,MLLT10,NEBL	-3653,355666,-3653
chr19:693898-694490	chr19	+	694244	694310	True	NM_214710,NM_001040134	chr19,chr19	-,+	PRSS57,PALM	1203,14642
chr7:72344086-72346068	chr7	+	72344097	72345849	True	NR_003666,NM_172020	chr7,chr7	-,+	SPDYE7P,POM121	-4442,4086
chr7:72344086-72346068	chr7	+	102000122	102000175	False	NM_024653,NM_001146210	chr7,chr7	+,-	PRKRIP1,SPDYE6	36628,-3233
chr7:72344086-72346068	chr7	-	66740806	66740856	False	NM_022906,NR_022007	chr7,chr7	+,-	STAG3L4,PMS2P4	26759,26600
chr7:72344086-72346068	chr7	+	76173692	76174581	False	NR_029411,NR_003262	chr7,chr7	+,-	LOC100133091,FDPSL2A	4076,-69375
chr7:72344086-72346068	chr7	-	75119633	75121360	False	NM_001099415,NM_001099435	chr7,chr7	-,+	POM121C,SPDYE5	-4065,2938
chr9:98077665-98078884	chr9	+	98077972	98078925	True	NM_000136,NR_029496	chr9,chr9	-,+	FANCC,MIR24-1	1117,-229720
chr2:85582290-85582977	chr2	+	85582424	85582886	True	NM_001135022,NM_001135023,NM_001135021,NM_032213,NM_017750	chr2,chr2,chr2,chr2,chr2	+,+,+,+,-	ELMOD3,ELMOD3,ELMOD3,ELMOD3,RETSAT	-634,-634,-634,-634,-603
chr3:69061274-69061573	chr3	+	69061290	69061623	True	NM_006407,NM_173654	chr3,chr3	+,-	ARL6IP5,C3orf64	72466,1203
chr12:112738983-112740430	chr12	+	112739330	112740396	True	NM_002834,NM_001109662	chr12,chr12	+,-	PTPN11,C12orf51	116139,79553
chr8:38329853-38330580	chr8	+	38329859	38330487	True	NM_001174065,NM_001174064,NM_015850,NM_001174066,NM_001174063,NM_023110,NM_023105,NM_001174067,NM_023106,NM_001199660	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,-,-,-,-,-,+	FGFR1,FGFR1,FGFR1,FGFR1,FGFR1,FGFR1,FGFR1,FGFR1,FGFR1,LETM2	-4496,-3507,-3507,-4496,-3507,-3507,-3507,-4496,-3507,-85261
chr21:45756391-45756890	chr21	+	45756403	45756615	True	NM_003307,NM_004928	chr21,chr21	+,-	TRPM2,C21orf2	16868,2720
chr7:1499958-1500611	chr7	+	1500024	1500644	True	NM_002360,NM_182924	chr7,chr7	+,-	MAFK,MICALL2	69723,-915
chr6:88984478-88985631	chr6	+	88984524	88985624	True	NM_030960,NM_016083	chr6,chr6	+,-	SPACA1,CNR1	-227078,-108757
chr1:179561104-179561578	chr1	+	179561384	179561620	True	NM_001199091,NM_001199085,NM_173533,NM_014625,NM_001199089	chr1,chr1,chr1,chr1,chr1	+,+,+,-,+	TDRD5,TDRD5,TDRD5,NPHS2,TDRD5	-687,-678,-678,-16300,-446
chr16:70149185-70149526	chr16	+	70149307	70149535	True	NM_017990,NR_003610	chr16,chr16	+,-	PDPR,PDXDC2P	-1829,-49456
chr16:70149185-70149526	chr16	-	74400807	74400903	False	NR_026950,NM_002811	chr16,chr16	-,+	LOC283922,PSMD7	1300,-70185
chr11:119692743-119693140	chr11	+	119692761	119693180	True	NM_203286,NM_178507	chr11,chr11	-,+	PVRL1,OAF	-93326,388566
chr1:32109482-32109850	chr1	+	32109531	32109817	True	NR_033688,NR_033686,NM_001525,NM_012392	chr1,chr1,chr1,chr1	-,-,+,-	PEF1,PEF1,HCRTR1,PEF1	451,1071,-26281,1071
chr19:12836611-12837029	chr19	+	12836910	12837029	True	NM_001136196,NM_001136195,NM_004317,NM_024038,NM_013433	chr19,chr19,chr19,chr19,chr19	-,-,+,-,-	TNPO2,TNPO2,ASNA1,C19orf43,TNPO2	-3448,-2100,11276,8551,-3805
chr20:31755108-31755461	chr20	+	31755125	31755420	True	NM_080574,NM_080675	chr20,chr20	+,-	C20orf70,SUN5	539,-162886
chr1:226961051-226961270	chr1	+	226961070	226961314	True	NM_002221,NM_000447	chr1,chr1	-,+	ITPKB,PSEN2	-34194,96958
chr17:48073421-48074049	chr17	+	48073421	48073877	True	NM_005220,NM_001934	chr17,chr17	-,+	DLX3,DLX4	-833,-23343
chr17:79340862-79341149	chr17	+	79340919	79341139	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	32400,-36445
chr10:126479627-126480209	chr10	+	126479629	126479973	True	NM_032182,NM_212554	chr10,chr10	+,-	FAM175B,METTL10	10380,516
chr2:85199696-85201621	chr2	+	85199866	85201551	True	NM_020122,NM_001080824	chr2,chr2	+,-	KCMF1,C2orf89	-1697,-91614
chr2:239110788-239111358	chr2	+	239110880	239111394	True	NM_030768,NR_026923	chr2,chr2	-,+	ILKAP,LOC643387	980,28932
chr2:16848507-16849651	chr2	+	16848668	16849621	True	NM_005378,NM_030797	chr2,chr2	+,-	MYCN,FAM49A	-768036,-1534
chr19:36156453-36156681	chr19	+	36156521	36156723	True	NM_024660,NM_007000	chr19,chr19	-,+	IGFLR1,UPK1A	76678,991
chr8:7932161-7933816	chr8	+	7932325	7933611	True	NR_031689,NR_027424	chr8,chr8	-,+	MIR548I3,FAM66E	13050,-119847
chr8:7932161-7933816	chr8	-	12449640	12449696	False	NR_037492,NR_037495	chr8,chr8	-,+	MIR3926-1,MIR3926-2	135173,135049
chr8:7932161-7933816	chr8	-	7528467	7528851	False	NM_001136572,NM_001164452	chr8,chr8	-,+	FAM90A7,FAM90A14	-88292,44113
chr8:7932161-7933816	chr8	-	7068946	7070249	False	NR_027000,NM_001164452	chr8,chr8	-,+	LOC349196,FAM90A14	50821,44176
chr17:60500192-60501040	chr7	+	128116402	128116452	True	NM_183243,NM_018396	chr7,chr7	-,+	IMPDH1,METTL2B	-66366,330
chr4:42398899-42399228	chr4	+	42398963	42399221	True	NM_207406,NM_001080505	chr4,chr4	-,+	BEND4,SHISA3	-244068,634
chr19:37326045-37327376	chr19	+	37326223	37327323	True	NM_003419,NM_206894	chr19,chr19	+,-	ZNF345,ZNF790	13943,2018
chr10:21783979-21784266	chr10	+	21783979	21784190	True	NM_001010911,NM_001195627,NR_031736	chr10,chr10,chr10	-,+,-	C10orf114,MLLT10,MIR1915	2074,38910,1431
chr19:29452067-29453918	chr19	+	29452237	29453939	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	2098,250247
chr19:10675598-10676503	chr19	+	10675647	10676449	True	NM_023008,NM_079421,NR_031603,NM_001800	chr19,chr19,chr19,chr19	-,-,+,-	KRI1,CDKN2D,MIR1238,CDKN2D	303,3256,-12900,3232
chr8:32504963-32505332	chr8	+	32504991	32505349	True	NM_013959,NM_032664	chr8,chr8	+,-	NRG1,FUT10	-798,825365
chr11:124005683-124006328	chr11	+	124005864	124006185	True	NM_014622,NM_001004463	chr11,chr11	+,-	VWA5A,OR10G7	-19804,-96156
chr12:323485-324680	chr12	+	323700	324424	True	NM_001122848,NM_015232,NM_003044,NM_001122847	chr12,chr12,chr12,chr12	-,+,-,-	SLC6A12,IQSEC3,SLC6A12,SLC6A12	-329,-137209,-1208,-866
chr7:138819307-138819746	chr7	+	138819324	138819721	True	NM_001144923,NM_024926,NM_001144920,NM_024625	chr7,chr7,chr7,chr7	+,+,+,-	TTC26,TTC26,TTC26,ZC3HAV1	-899,-899,-899,-24859
chr20:32078590-32079629	chr20	+	32078743	32079492	True	NM_001032999,NM_003098	chr20,chr20	+,-	CBFA2T2,SNTA1	-866,-47045
chr17:55981928-55982250	chr17	+	55982000	55982234	True	NM_080677,NM_017949	chr17,chr17	+,-	DYNLL2,CUEDC1	178545,-1250
chr12:6795713-6796043	chr12	+	6795713	6796083	True	NM_001039917,NM_001039916,NM_001039920,NM_001135734,NM_001039919,NM_001039918,NM_133476,NM_001164094	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,-,-,-,-,-,-,+	ZNF384,ZNF384,ZNF384,ZNF384,ZNF384,ZNF384,ZNF384,COPS7A	2644,1800,2644,2651,2644,2502,2502,37066
chr6:126337001-126338275	chr6	+	126337037	126337944	True	NM_016063,NM_001031712	chr6,chr6	-,+	HDDC2,TRMT11	-713755,-29519
chr22:22984955-22985226	chr22	+	22985187	22985259	True	NM_199127,NR_024591	chr22,chr22	+,-	GGTLC2,POM121L1P	3522,1803
chr11:123601475-123601977	chr11	+	123601482	123601913	True	NM_003455,NM_001005197	chr11,chr11	-,+	ZNF202,OR8D4	10501,175225
chr4:1683687-1684331	chr4	+	1683713	1684361	True	NM_001013622,NM_001174070,NM_006342	chr4,chr4,chr4	-,-,+	FAM53A,FAM53A,TACC3	1409,1679,38904
chr19:18900054-18900286	chr19	+	18900161	18900297	True	NM_000095,NM_002911	chr19,chr19	-,+	COMP,UPF1	1867,42446
chr3:190965915-190967885	chr3	+	190965938	190967917	True	NM_198184,NM_198152	chr3,chr3	+,-	OSTN,UTS2D	-35676,80459
chr7:6386340-6387700	chr7	+	6386401	6387415	True	NM_006908,NM_001037163	chr7,chr7	+,-	RAC1,C7orf70	26710,1234
chr1:20839563-20840307	chr1	+	20839929	20840113	True	NM_024544,NM_207334	chr1,chr1	-,+	MUL1,FAM43B	-5255,38818
chr10:98077915-98078250	chr10	+	98077915	98078265	True	NM_001040102,NM_004088	chr10,chr10	-,+	OPALIN,DNTT	40877,-13881
chr17:20800068-20800345	chr17	+	20800073	20800145	True	NM_001004306,NM_015510	chr17,chr17	-,+	CCDC144NL,DHRS7B	-620,230112
chr17:20800068-20800345	chr17	-	16592725	16592874	False	NM_020787,NM_014695	chr17,chr17	-,+	ZNF624,CCDC144A	-35558,764
chr17:20800068-20800345	chr17	-	20223639	20223788	False	NM_001042685,NR_023380	chr17,chr17	-,+	LGALS9B,CCDC144C	147110,698
chr8:25903777-25904062	chr8	+	25903904	25904048	True	NM_002717,NM_022659	chr8,chr8	+,-	PPP2R2A,EBF2	244958,-1512
chr6:37320235-37320568	chr6	+	37320474	37320557	True	NM_183078,NM_001162900,NM_003958	chr6,chr6,chr6	+,-,+	RNF8,TMEM217,RNF8	1190,-94543,1190
chr20:34043875-34045541	chr20	+	34044193	34045001	True	NM_007186,NM_000557	chr20,chr20	+,-	CEP250,GDF5	-1022,-18166
chr12:53901439-53902065	chr12	+	53901444	53901824	True	NM_003717,NM_004178,NM_134323,NM_001193511,NM_134324,NM_006301	chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,-,+,-	NPFF,TARBP2,TARBP2,MAP3K12,TARBP2,MAP3K12	-22,-6792,-6792,-8000,-6120,-8000
chr5:172754130-172754369	chr5	+	172754170	172754400	True	NM_013980,NM_003714	chr5,chr5	+,-	BNIP1,STC2	-182776,2156
chrX:48165661-48166581	chrX	+	48165732	48166234	True	NM_021014,NM_005635	chrX,chrX	-,+	SSX3,SSX1	49958,-50986
chr12:108153998-108154420	chr12	+	108154048	108154394	True	NM_012406,NM_203436	chr12,chr12	-,+	PRDM4,ASCL4	570,13767
chr8:95276572-95278415	chr8	+	95277011	95278455	True	NM_005261,NM_181702,NM_001161778	chr8,chr8,chr8	-,-,+	GEM,GEM,PDP1	-2464,-2464,-347070
chr1:156676615-156676963	chr1	+	156676688	156677012	True	NM_001199723,NM_001878,NM_001142560	chr1,chr1,chr1	-,-,+	CRABP2,CRABP2,RRNAD1	-1080,-1229,21250
chr2:209130614-209130894	chr2	+	209130614	209130852	True	NM_015040,NM_005896,NM_152671,NM_001178000	chr2,chr2,chr2,chr2	+,-,+,+	PIKFYVE,IDH1,PIKFYVE,PIKFYVE	138,-10808,138,138
chr4:91163283-91164490	chr4	+	91163485	91164070	True	NM_001146055,NM_207491	chr4,chr4	-,+	SNCA,FAM190A	-404038,-7360
chr17:44668193-44668518	chr17_ctg5_hap1	-	380193	380299	False	NM_001113738,NR_033799,NM_006178	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	+,-,-	ARL17A,NSFP1,NSF	11283,304,366
chr17:44668193-44668518	chr17_ctg5_hap1	+	1525166	1525272	False	NM_016632	chr17_ctg5_hap1	-	ARL17A	-11282
chr17:44668193-44668518	chr17	+	44668353	44668459	True	NM_001113738,NR_033799,NM_006178	chr17,chr17,chr17	-,+,+	ARL17A,NSFP1,NSF	-11265,-304,-366
chr17:44668193-44668518	chr17	+	44450432	44450538	False	NM_001113738,NR_033799	chr17,chr17	-,+	ARL17A,NSFP1	-11269,-304
chr6:24648729-24649728	chr6	+	24648908	24649546	True	NM_001160094,NM_001168374,NM_001168375,NM_001168376,NM_014809,NM_001168377	chr6,chr6,chr6,chr6,chr6,chr6	+,-,-,-,-,-	ACOT13,KIAA0319,KIAA0319,KIAA0319,KIAA0319,KIAA0319	17716,-2525,-2659,-2659,-2525,-2525
chr10:15392057-15393255	chr10	+	15392101	15393238	True	NM_183005,NM_001010924	chr10,chr10	+,-	RPP38,FAM171A1	-252970,19877
chr8:42751056-42751265	chr8	+	42751097	42751263	True	NM_001160223,NM_001160224,NM_001160225,NM_032410,NM_030954,NR_027669,NR_027668	chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,+,-,-,-	RNF170,RNF170,RNF170,HOOK3,RNF170,RNF170,RNF170	653,653,653,769,653,653,653
chr14:23387526-23387934	chr14	+	23387663	23387947	True	NM_001077351,NM_173527,NM_001077352,NM_018107	chr14,chr14,chr14,chr14	-,+,-,-	RBM23,REM2,RBM23,RBM23	499,-35282,499,499
chr3:46603066-46604374	chr3	+	46603221	46604184	True	NM_001174136,NM_024512	chr3,chr3	+,-	TDGF1,LRRC2	11860,3877
chr2:68384444-68384723	chr2	+	68384477	68384687	True	NM_138458,NM_020143	chr2,chr2	-,+	WDR92,PNO1	19,317
chr7:23760438-23762086	chr7	+	23760448	23761439	True	NM_032944,NR_002711	chr7,chr7	+,-	STK31,CLK2P	-10509,-134302
chr21:44859375-44860996	chr21	+	44859684	44860964	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	8939,-12682
chr11:416905-417166	chr11	+	416927	417186	True	NM_001135053,NM_007183,NM_001135054,NM_021805	chr11,chr11,chr11,chr11	-,+,-,-	SIGIRR,PKP3,SIGIRR,SIGIRR	261,-22761,-1928,261
chr2:43455095-43457060	chr2	+	43455263	43456759	True	NR_027251,NM_006887	chr2,chr2	+,-	LOC100129726,ZFP36L2	-970,-1518
chr1:227062828-227063213	chr1	+	227062910	227063186	True	NM_002221,NM_012486,NM_000447	chr1,chr1,chr1	-,+,+	ITPKB,PSEN2,PSEN2	-136034,-4695,-4695
chr9:74675254-74676691	chr9	+	74675466	74676451	True	NM_004293,NM_001128618	chr9,chr9	+,-	GDA,C9orf57	87841,25
chr6:24673795-24675131	chr6	+	24673866	24674743	True	NM_018473,NM_001160094,NM_016614	chr6,chr6,chr6	+,+,-	ACOT13,ACOT13,TDP2	-6660,-6660,-6751
chrX:150343710-150343982	chrX	+	150343710	150343990	True	NR_036256,NM_134446,NM_004224	chrX,chrX,chrX	+,-,+	MIR4330,CD99L2,GPR50	-7067,-276421,1065
chr3:148851379-148852811	chr3	+	148851476	148852833	True	NM_032383,NM_139048	chr3,chr3	+,-	HPS3,HLTF	-4164,-47135
chr12:31885538-31886579	chr12	+	31885684	31886176	True	NR_004854,NM_001135863,NM_001113402	chr12,chr12,chr12	-,+,-	AMN1,METTL20,AMN1	-3576,-73126,-3576
chr22:42083976-42084669	chr22	+	42083976	42084705	True	NM_001003796,NM_001142964,NM_005008	chr22,chr22,chr22	-,+,-	NHP2L1,C22orf46,NHP2L1	258,1841,-5420
chr7:100023836-100025176	chr7	+	100024159	100024961	True	NM_001194992,NM_001194991,NM_001194990,NM_019606,NM_017984,NM_145030	chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,-,-	MEPCE,MEPCE,MEPCE,MEPCE,ZCWPW1,C7orf47	1451,1451,1451,2292,1391,9183
chr7:119434955-119435910	chr7	+	119435070	119435710	True	NM_012281,NM_012338	chr7,chr7	+,-	KCND2,TSPAN12	478011,1062517
chr6:109708021-109708528	chr6	+	109708330	109708402	True	NM_001142404,NM_001142402,NM_001142403,NM_001142401,NM_006016,NM_003080	chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,-,-,+	CD164,CD164,CD164,CD164,CD164,SMPD2	-4568,-4568,-4568,-4568,-4568,53528
chr2:46706137-46706756	chr2	+	46706215	46706695	True	NM_080653,NM_001145051	chr2,chr2	-,+	ATP6V1E2,LOC388946	40451,8
chr16:33262472-33262797	chr16	+	33262480	33262816	True	NM_001205260,NM_001205265,NM_001205259,NM_001099687,NM_016212,NR_033866	chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,-	LOC653550,TP53TG3B,LOC653550,TP53TG3B,TP53TG3,LOC390705	-411,-411,-411,-411,-1016,35936
chr16:33262472-33262797	chr16	+	33205945	33206281	False	NM_001205260,NM_001205265,NM_001205259,NM_001099687,NM_016212,NR_033866	chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,+,-	LOC653550,TP53TG3B,LOC653550,TP53TG3B,TP53TG3,LOC390705	-411,-411,-411,-411,-1016,92471
chr16:33262472-33262797	chr16	+	32265005	32265341	False	NR_033866,NM_003414	chr16,chr16	-,+	LOC390705,ZNF267	36011,-379977
chr16:33262472-33262797	chr16	-	32686751	32687087	False	NM_001205260,NM_016212,NM_001099687,NM_001205259,NM_001205265	chr16,chr16,chr16,chr16,chr16	-,-,-,-,-	LOC653550,TP53TG3,TP53TG3B,LOC653550,TP53TG3B	411,1016,411,411,411
chr2:47799163-47799403	chr2	+	47799167	47799429	True	NM_022055,NM_000251	chr2,chr2	-,+	KCNK12,MSH2	-1697,-168955
chr16:2029875-2030178	chr16	+	2029898	2030222	True	NM_005262,NM_144603,NM_172167,NM_006453,NM_172168,NM_004209	chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,+,-,+	GFER,NOXO1,NOXO1,TBL3,NOXO1,SYNGR3	3927,1268,1012,-7885,1012,9723
chr15:25230632-25230866	chr15	+	25230747	25230905	True	NR_022008,NR_022011,NM_130838,NR_001292,NR_001293,NR_001294	chr15,chr15,chr15,chr15,chr15,chr15	+,+,-,+,+,+	PAR5,PAR-SN,UBE3A,SNORD108,SNORD107,SNORD64	-799,-3665,419798,1166,-3665,-559
chr19:55866129-55866497	chr19	+	55866261	55866461	True	NM_144613,NM_032701,NM_001145402	chr19,chr19,chr19	-,+,-	COX6B2,SUV420H2,FAM71E2	-79,-15091,8209
chr8:110550716-110551999	chr8	+	110550914	110551729	True	NM_004215,NM_198120,NM_001099756	chr8,chr8,chr8	+,+,-	EBAG9,EBAG9,SYBU	580,199,103740
chr9:33956620-33957883	chr9	+	33956619	33957925	True	NR_003685,NR_003690	chr9,chr9	-,+	SNORD121A,SNORD121B	-3767,-22390
chr12:71888019-71888824	chr12	+	71888179	71888757	True	NM_003667,NM_144982	chr12,chr12	+,-	LGR5,ZFC3H1	-54427,169042
chr1:40272321-40273373	chr1	+	40272646	40272973	True	NM_001720,NM_001195007	chr1,chr1	-,+	BMP8B,PPIE	-18113,-68188
chr8:57905721-57906043	chr8	+	57905768	57906078	True	NR_026772,NM_017813	chr8,chr8	+,-	C8orf71,IMPAD1	286023,399
chr2:162271945-162272311	chr2	+	162271945	162272357	True	NM_006593,NM_001935	chr2,chr2	+,-	TBR1,DPP4	262,658745
chr14:96150465-96152006	chr14	+	96150492	96151954	True	NM_001098725,NM_004918	chr14,chr14	-,+	TCL1A,TCL1B	28629,799
chr21:45935442-45936543	chr21	+	45935517	45936527	True	NR_026548,NR_026547,NM_198691	chr21,chr21,chr21	+,+,-	C21orf90,C21orf90,KRTAP10-1	570,570,23601
chr16:57570664-57571025	chr16	+	57570748	57571004	True	NM_153837,NM_033212	chr16,chr16	+,-	GPR114,CCDC102A	5596,-271
chr11:47662735-47663618	chr11	+	47662743	47663548	True	NM_014342,NM_001164379	chr11,chr11	-,+	MTCH2,FAM180B	715,-54565
chr18:5197186-5197418	chr18	+	5197313	5197401	True	NM_001145194,NR_015389	chr18,chr18	-,+	LOC642597,LOC339290	-58,40697
chr11:78131227-78131485	chr11	+	78131244	78131450	True	NM_080491,NM_020798	chr11,chr11	-,+	GAB2,USP35	-2376,-231437
chr2:183732005-183733969	chr2	+	183732302	183733825	True	NM_018981,NM_001463	chr2,chr2	+,-	DNAJC10,FRZB	-151354,-804
chr22:43114564-43114945	chr22	+	43114655	43114923	True	NR_029422,NM_017436	chr22,chr22	+,-	RNU12,A4GALT	-103463,2003
chr4:154385738-154386833	chr4	+	154385850	154386694	True	NR_001562,NM_015196,NM_001131007	chr4,chr4,chr4	-,+,+	ANXA2P1,KIAA0922,KIAA0922	-155887,803,803
chr17:73267975-73268306	chr17	+	73267985	73268049	True	NR_036520,NM_001172703,NM_001172704,NM_020679	chr17,chr17,chr17,chr17	+,-,-,-	LOC100287042,GGA3,GGA3,MIF4GD	-656,-9541,-9541,-682
chr16:332679-332943	chr16	+	332719	332781	True	NM_183337,NM_006849,NM_001176,NM_003834	chr16,chr16,chr16,chr16	-,+,+,-	RGS11,PDIA2,ARHGDIG,RGS11	-6805,336,-2164,-6805
chr1:159870913-159871237	chr1	+	159870958	159871272	True	NM_012337,NM_020125	chr1,chr1	-,+	CCDC19,SLAMF8	-1052,-74530
chr8:7814093-7815284	chr8	+	7814150	7814277	True	NR_003668,NR_027424	chr8,chr8	-,+	DEFB109P1B,FAM66E	40829,-1666
chr8:7814093-7815284	chr8	+	12221205	12221276	False	NR_024044,NR_026789	chr8,chr8	-,+	DEFB109P1,FAM66A	36661,-1741
chr4:165898823-165899394	chr4	+	165898999	165899397	True	NM_153027,NM_001012414	chr4,chr4	+,-	C4orf39,TRIM61	-20951,-181
chr17:68164917-68165130	chr17	+	68164958	68165046	True	NR_036534,NM_000891	chr17,chr17	-,+	FLJ36644,KCNJ2	547,629
chr3:124306085-124307430	chr3	+	124306205	124307233	True	NM_007064,NM_002213	chr3,chr3	+,-	KALRN,ITGB5	-2750,298969
chr2:113006491-113008164	chr2	+	113006833	113008198	True	NM_032494,NM_198581	chr2,chr2	-,+	ZC3H8,ZC3H6	4516,24979
chr22:43254166-43254551	chr22	+	43254197	43254427	True	NM_001142293,NM_014570,NR_029422	chr22,chr22,chr22	-,-,+	ARFGAP3,ARFGAP3,RNU12	-789,-789,-242997
chr16:21443969-21445024	chr16	+	21444560	21444640	True	NR_024456,NR_026675,NM_130464	chr16,chr16,chr16	-,+,-	LOC100190986,NCRNA00169,NPIPL3	1186,-132453,-7902
chr16:21443969-21445024	chr16	-	22516905	22516985	False	NM_001135865,NR_027460	chr16,chr16	+,-	LOC100132247,RRN3P3	7858,-67869
chr16:21443969-21445024	chr16	+	21876840	21876920	False	NM_003366,NR_003370	chr16,chr16	+,-	UQCRC2,RRN3P1	87688,-46345
chr16:21443969-21445024	chr16	+	29525038	29525118	False	NR_002557,NM_177552	chr16,chr16	-,+	LOC613038,SULT1A3	-46139,-53894
chr16:21443969-21445024	chr16	+	30265023	30265103	False	NR_002555,NM_177552	chr16,chr16	-,+	LOC613037,SULT1A3	-8091,-54537
chr1:213124949-213126132	chr1	+	213125209	213126155	True	NM_001136474,NM_001136475,NM_144567,NM_024749	chr1,chr1,chr1,chr1	+,+,-,+	VASH2,VASH2,ANGEL2,VASH2	-1373,-1373,63063,-1373
chr11:536169-536489	chr11	+	536279	536432	True	NM_176795,NM_001130442,NM_005343,NM_198075	chr11,chr11,chr11,chr11	-,-,-,+	HRAS,HRAS,HRAS,LRRC56	-729,-729,-729,1089
chr2:220252635-220252986	chr2	+	220252725	220252947	True	NM_012100,NM_001927	chr2,chr2	-,+	DNPEP,DES	-63,30151
chr7:130791731-130792113	chr7	+	130791772	130792087	True	NR_015431,NM_001145354,NR_024153	chr7,chr7,chr7	-,+,-	FLJ43663,MKLN1,FLJ43663	1536,2767,11
chr11:111251210-111252325	chr11	+	111251226	111252164	True	NM_001136105,NM_006235	chr11,chr11	+,-	C11orf93,POU2AF1	-81301,-1069
chr19:58011633-58013469	chr19	+	58011983	58013312	True	NM_001144068,NM_198542	chr19,chr19	-,+	ZNF772,ZNF773	-23045,-726
chr13:42623645-42624226	chr13	+	42623792	42624089	True	NM_178009,NM_001204504,NM_152910,NM_001009814	chr13,chr13,chr13,chr13	+,+,+,-	DGKH,DGKH,DGKH,KIAA0564	-1000,-9671,-1000,-88571
chr13:103544081-103545255	chr13	+	103544489	103545176	True	NM_024089,NR_026965	chr13,chr13	-,+	KDELC1,LOC121952	-93085,-12101
chr16:83983373-83983628	chr16	+	83983430	83983666	True	NM_013370,NM_001080442,NM_182981,NM_182980	chr16,chr16,chr16,chr16	+,-,+,+	OSGIN1,SLC38A8,OSGIN1,OSGIN1	-809,92146,3160,-809
chr6:37662187-37662976	chr6	+	37662316	37662912	True	NM_153487,NM_021943	chr6,chr6	-,+	MDGA1,ZFAND3	2904,124394
chr22:42475949-42476508	chr22	+	42476044	42476492	True	NM_033318,NM_001002034,NM_000262	chr22,chr22,chr22	+,+,-	C22orf32,FAM109B,NAGA	-396,-5840,-9198
chr8:124666137-124666374	chr8	+	124666146	124666310	True	NM_001081675,NM_144963	chr8,chr8	-,+	KLHL38,FAM91A1	-956,114571
chr9:35489511-35489747	chr9	+	35489618	35489716	True	NM_014806,NM_001099951	chr9,chr9	+,-	RUSC2,FAM166B	290,74230
chr7:103970223-103971804	chr7	+	103970271	103971752	True	NM_199000,NM_181747	chr7,chr7	+,-	LHFPL3,ORC5	-1227,-121776
chr20:34204247-34204642	chr20	+	34204304	34204516	True	NR_024377,NM_003116	chr20,chr20	-,+	FER1L4,SPAG4	-8820,-546
chr10:61665864-61666239	chr10	+	61665871	61666137	True	NM_005436,NM_001143774	chr10,chr10	-,+	CCDC6,PHYHIPL	327,-728695
chr11:66883111-66883983	chr11	+	66883369	66883796	True	NM_012308,NM_001040716,NR_027473	chr11,chr11,chr11	+,-,+	KDM2A,PC,KDM2A	2943,-157522,2943
chr8:66928634-66930473	chr8	+	66928939	66930425	True	NM_000756,NM_033105	chr8,chr8	-,+	CRH,DNAJC5B	160471,3365
chr5:92915843-92916112	chr5	+	92915892	92916108	True	NR_021490,NR_021491,NR_015369,NM_005654	chr5,chr5,chr5,chr5	-,-,-,+	FLJ42709,FLJ42709,FLJ42709,NR2F1	945,895,-9393,2934
chr8:144895818-144896048	chr8	+	144895833	144896083	True	NR_033849,NM_182706,NR_030633,NM_015356	chr8,chr8,chr8,chr8	+,-,-,-	LOC100128338,SCRIB,MIR937,SCRIB	-79574,1516,-621,1516
chr6:144481230-144482798	chr6	+	144481615	144482847	True	NM_031287,NM_003764	chr6,chr6	-,+	SF3B5,STX11	-64861,-10016
chr6:33095301-33096053	chr6_dbb_hap3	+	4376941	4377001	False	NM_033554,NM_002121	chr6_dbb_hap3,chr6_dbb_hap3	-,+	HLA-DPA1,HLA-DPB1	-54224,-51893
chr6:33095301-33096053	chr6	+	33095635	33095695	True	NM_033554,NR_001435	chr6,chr6	-,+	HLA-DPA1,HLA-DPB2	-54257,-15393
chr6:33095301-33096053	chr6_ssto_hap7	+	4575800	4575860	False	NM_033554,NR_001435	chr6_ssto_hap7,chr6_ssto_hap7	-,+	HLA-DPA1,HLA-DPB2	-53918,-15080
chr6:33095301-33096053	chr6_apd_hap1	+	4382395	4382455	False	NM_033554,NR_001435	chr6_apd_hap1,chr6_apd_hap1	-,+	HLA-DPA1,HLA-DPB2	-54216,-15389
chr18:28682418-28682903	chr18	+	28682545	28682937	True	NM_001942,NM_004949,NM_024422	chr18,chr18,chr18	+,-,-	DSG1,DSC2,DSC2	215114,-157,-157
chr1:1142289-1142530	chr1	+	1142288	1142474	True	NM_004195,NM_148901,NM_148902,NM_003327,NM_080605	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	TNFRSF18,TNFRSF18,TNFRSF18,TNFRSF4,B3GALT6	-199,-199,-199,7124,25154
chr8:146176329-146176928	chr8	+	146176403	146176702	True	NM_001029976,NM_006958,NR_002807	chr8,chr8,chr8	-,-,+	ZNF16,ZNF16,TMED10P1	-129,-129,43548
chr17:76163296-76163579	chr17	+	76163411	76163598	True	NM_003258,NM_004710	chr17,chr17	-,+	TK1,SYNGR2	19737,1072
chr15:23931569-23931917	chr15	+	23931580	23931902	True	NM_005664,NM_002487	chr15,chr15	+,-	MKRN3,NDN	-121177,598
chr6:2836472-2837972	chr6	+	2836617	2837947	True	NM_130395,NM_030666	chr6,chr6	+,-	WRNIP1,SERPINB1	-71005,4184
chr12:46121950-46122506	chr12	+	46122171	46122500	True	NR_028408,NM_152641	chr12,chr12	-,+	LOC400027,ARID2	-467,1119
chr13:103415304-103415682	chr13	+	103415446	103415610	True	NM_001159596,NM_001146197	chr13,chr13	+,-	BIVM,C13orf40	35788,-4024
chr22:25616217-25617825	chr22	+	25616360	25617786	True	NM_182492,NM_000496	chr22,chr22	-,+	LRP5L,CRYBB2	140788,-799
chr17:38173124-38174371	chr17	+	38173256	38174249	True	NM_001079518,NM_000759,NR_003692,NR_033662,NM_172220,NM_172219,NM_001178147	chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,+,+,+,+,+	MED24,CSF3,SNORD124,CSF3,CSF3,CSF3,CSF3	36697,-1694,9545,-1694,-1694,-1694,-1694
chr15:90646210-90647429	chr15	+	90646569	90647464	True	NM_002168,NM_020210	chr15,chr15	-,+	IDH2,SEMA4B	-861,80687
chr7:5324729-5325014	chr7	+	5324745	5324883	True	NM_153247,NM_001040661,NM_001080495	chr7,chr7,chr7	+,+,-	SLC29A4,SLC29A4,TNRC18	-2235,-2235,138344
chr4:25030343-25031105	chr4	+	25030360	25030961	True	NR_037934,NM_018176	chr4,chr4	+,-	LOC285540,LGI2	131332,1510
chr6:66547735-66548468	chr6	+	66547808	66548523	True	NR_026540,NM_001142801	chr6,chr6	+,-	MCART3P,EYS	-50087,-130690
chr18:25758741-25758956	chr18	+	25758785	25758903	True	NR_026908,NM_001792	chr18,chr18	+,-	C18orf16,CDH2	-1313571,-1340
chr19:38211565-38212202	chr19	+	38211569	38212252	True	NM_001172226,NM_032689,NM_001172677	chr19,chr19,chr19	+,-,-	ZNF540,ZNF607,ZNF607	-125889,-878,-1480
chr1:203148506-203149484	chr1	+	203148558	203149454	True	NM_001276,NM_004997,NM_001048230	chr1,chr1,chr1	-,-,+	CHI3L1,MYBPH,ADORA1	6518,-3616,-51773
chr19:42791794-42792268	chr19	+	42792221	42792288	True	NM_015125,NM_002573	chr19,chr19	+,-	CIC,PAFAH1B3	-3455,14559
chr10:102990265-102990816	chr10	+	102990265	102990763	True	NR_029380,NM_006562	chr10,chr10	+,-	FLJ41350,LBX1	-965,-1548
chr2:32852326-32852645	chr2	+	32852469	32852683	True	NM_017735,NM_021209,NM_001193509	chr2,chr2,chr2	+,-,+	TTC27,NLRC4,TTC27	403,-361657,403
chr1:161732292-161732714	chr1	+	161732459	161732618	True	NM_007348,NR_002595	chr1,chr1	+,-	ATF6,RPL31P11	3465,-77417
chr1:241680244-241680595	chr1	+	241680466	241680617	True	NM_003679,NM_000143	chr1,chr1	+,-	KMO,FH	15062,2523
chr4:103789518-103790086	chr4	+	103789578	103790029	True	NM_001008388,NM_181890,NM_181893	chr4,chr4,chr4	+,-,-	CISD2,UBE2D3,UBE2D3	105,53,24
chr15:71146851-71147068	chr15	+	71146930	71146994	True	NM_018357,NM_001199017,NM_197958	chr15,chr15,chr15	-,+,-	LARP6,LRRC49,LARP6	-432,37933,-432
chr22:23410600-23411010	chr22	+	23410614	23410962	True	NM_002073,NM_014433	chr22,chr22	+,-	GNAZ,RTDR1	1706,73329
chr1:1218798-1219276	chr1	+	1219088	1219254	True	NR_037668,NM_194458,NM_194315,NM_194457,NM_001130413,NM_058167	chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,-,+,-	SCNN1D,UBE2J2,UBE2J2,UBE2J2,SCNN1D,UBE2J2	-8501,-9854,-9854,-9854,-8501,-9854
chr11:57506796-57507151	chr11	+	57506813	57506953	True	NM_001145101,NM_170746	chr11,chr11	-,+	BTBD18,C11orf31	12350,1768
chr19:46416372-46416620	chr19	+	46416441	46416636	True	NM_004497,NM_001029861	chr19,chr19	+,-	FOXA3,NANOS2	-48977,1450
chr18:43199983-43200977	chr18	+	43200064	43201016	True	NM_007163,NM_020964	chr18,chr18	+,-	SLC14A2,EPG5	-5349,346340
chr7:73257095-73257460	chr7	+	73257152	73257268	True	NM_001305,NM_152559	chr7,chr7	+,-	CLDN4,WBSCR27	-12010,-297
chr3:28286827-28287091	chr3	+	28286827	28287138	True	NM_022461,NM_182523	chr3,chr3	-,+	AZI2,CMC1	103530,-3758
chr19:10342223-10343590	chr19	+	10342365	10343037	True	NR_036206,NM_004230	chr19,chr19	+,-	MIR4322,S1PR2	-1334,-417
chr9:108456831-108457049	chr9	+	108456900	108457064	True	NM_018112,NM_005502	chr9,chr9	+,-	TMEM38B,ABCA1	-126,-766373
chr1:168698827-168699847	chr1	+	168698858	168699320	True	NR_024160,NM_001937	chr1,chr1	+,-	MGC4473,DPT	56858,-416
chr10:101989517-101989721	chr10	+	101989516	101989632	True	NM_005063,NR_002954,NM_001278	chr10,chr10,chr10	+,-,-	SCD,SNORA12,CHUK	117139,7477,-172
chr2:74732717-74733329	chr2	+	74732721	74733375	True	NR_024606,NM_001009812,NM_032673,NM_016170	chr2,chr2,chr2,chr2	+,-,-,+	LOC151534,LBX2,PCGF1,TLX2	-3028,-2278,1496,8220
chr1:161227913-161228518	chr1	+	161228119	161228511	True	NM_001077469,NM_001102566	chr1,chr1	-,+	NR1I3,PCP4L1	-20119,5
chr17:72542115-72543407	chr17	+	72542313	72543177	True	NM_152460,NM_006678	chr17,chr17	+,-	C17orf77,CD300C	37879,-31
chr15:74525772-74527096	chr15	+	74525785	74526653	True	NM_001199040,NM_025055	chr15,chr15	-,+	STRA6,CCDC33	-23739,2013
chr2:118572502-118572790	chr2	+	118572635	118572829	True	NM_019044,NM_006773	chr2,chr2	-,+	CCDC93,DDX18	198960,-431
chr4:8584386-8584947	chr4	+	8584417	8584909	True	NM_001014447,NM_003501,NM_080819,NM_001014448,NM_003652	chr4,chr4,chr4,chr4,chr4	+,-,+,+,+	CPZ,ACOX3,GPR78,CPZ,CPZ	9477,-141965,-2177,9477,9477
chr19:48249161-48249779	chr19	+	48249200	48249363	True	NM_015710,NM_198479,NR_003048	chr19,chr19,chr19	+,-,+	GLTSCR2,TPRX1,SNORD23	-465,57559,9746
chr10:75540218-75540954	chr10	+	75540480	75540841	True	NM_015037,NM_003635,NM_203298,NM_173540	chr10,chr10,chr10,chr10	+,-,+,+	KIAA0913,NDST2,CHCHD1,FUT11	4763,30811,966,-8488
chr5:175514222-175516145	chr5	+	175514222	175515984	True	NR_036494,NM_001079529	chr5,chr5	-,+	LOC643201,FAM153B	110378,-2364
chr5:175514222-175516145	chr5	+	177459851	177461158	False	NM_006261,NM_001079527	chr5,chr5	-,+	PROP1,FAM153C	-36608,-24213
chr5:175514222-175516145	chr5	-	177176181	177177633	False	NR_003615,NM_173663	chr5,chr5	+,-	LOC728554,FAM153A	124628,29929
chr14:35899841-35900698	chr14	+	35899911	35900697	True	NM_032594,NM_020529	chr14,chr14	+,-	INSM2,NFKBIA	102550,-25951
chr6:80246635-80247015	chr6	+	80246640	80247062	True	NM_031469,NM_001122769,NM_181714	chr6,chr6,chr6	+,-,-	SH3BGRL2,LCA5,LCA5	93937,135,135
chr17:17684238-17685163	chr17	+	17684245	17685127	True	NM_030665,NR_024007	chr17,chr17	+,-	RAI1,SMCR5	-99509,-1402
chr17:17205906-17206526	chr17	+	17206227	17206495	True	NM_003653,NM_020201	chr17,chr17	-,+	COPS3,NT5M	-21610,184
chr18:29671330-29671756	chr18	+	29671407	29671747	True	NM_014939,NM_001191324,NM_198128,NM_016271	chr18,chr18,chr18,chr18	-,+,+,+	TRAPPC8,RNF138,RNF138,RNF138	-148316,821,821,70
chr17:47025818-47026806	chr17	+	47026238	47026775	True	NM_023079,NM_007241	chr17,chr17	+,-	UBE2Z,SNF8	-40558,-4084
chr15:90747064-90747405	chr15	+	90747103	90747183	True	NM_198925,NM_006384	chr15,chr15	+,-	SEMA4B,CIB1	-2593,30146
chr1:211299774-211301553	chr1	+	211300090	211301324	True	NM_001136225,NM_002238,NM_172362	chr1,chr1,chr1	+,-,-	RCOR3,KCNH1,KCNH1	131383,6183,6183
chr10:17794023-17794859	chr10	+	17794089	17794495	True	NM_014241,NM_001098844	chr10,chr10	-,+	PTPLA,FAM23A	-134716,29
chr10:17794023-17794859	chr10	+	18041056	18041462	False	NM_014241,NM_001098844	chr10,chr10	-,+	PTPLA,FAM23A	-381683,29
chr12:31880806-31881396	chr12	+	31881069	31881407	True	NR_004854,NM_001135863,NM_001113402	chr12,chr12,chr12	-,+,-	AMN1,METTL20,AMN1	751,-68522,751
chr18:29789372-29791153	chr18	+	29789490	29790918	True	NM_005925,NM_022751	chr18,chr18	+,-	MEP1B,FAM59A	-19564,259586
chr3:108667906-108668320	chr3	+	108668062	108668366	True	NM_005459,NM_016388	chr3,chr3	-,+	GUCA1C,TRAT1	4361,-126491
chr18:19322035-19322950	chr18	+	19322118	19322798	True	NM_138340,NM_020774	chr18,chr18	-,+	ABHD3,MIB1	-37352,-624
chr17:42303210-42304382	chr17	+	42303776	42304387	True	NM_001076683,NM_001076684,NM_177441,NM_014233	chr17,chr17,chr17,chr17	-,-,+,-	UBTF,UBTF,TMUB2,UBTF	-5526,-6852,-39261,-8112
chr8:11184401-11185144	chr8	+	11184641	11184980	True	NM_054028,NM_173683	chr8,chr8	+,-	AMAC1L2,XKR6	3514,-125766
chrX:21762362-21763255	chrX	+	21762423	21763291	True	NM_015884,NM_014332	chrX,chrX	+,-	MBTPS2,SMPX	94364,12989
chr2:166650619-166650887	chr2	+	166650618	166650936	True	NM_004482,NM_024969	chr2,chr2	-,+	GALNT3,CSRNP3	-23,-221823
chr15:99191669-99191939	chr15	+	99191691	99191957	True	NM_182562,NM_000875	chr15,chr15	-,+	FAM169B,IGF1R	-134080,803
chr8:30585032-30585320	chr8	+	30585031	30585271	True	NM_001195103,NM_001195102,NM_000637,NM_005671,NM_001195104	chr8,chr8,chr8,chr8,chr8	-,-,-,+,-	GSR,GSR,GSR,UBXN8,GSR	265,265,265,16418,265
chr2:191223102-191224205	chr2	+	191223311	191224099	True	NM_198047,NM_002194	chr2,chr2	-,+	HIBCH,INPP1	-38540,-15166
chr13:79176952-79177184	chr13	+	79177037	79177221	True	NM_006237,NM_144595	chr13,chr13	-,+	POU4F1,SLAIN1	524,-861793
chr12:102267971-102269079	chr12	+	102268104	102268377	True	NM_018370,NM_024312	chr12,chr12	+,-	DRAM1,GNPTAB	2727,-43459
chr18:71817935-71818314	chr18	+	71818036	71818314	True	NM_014177,NM_152676,NM_001142958	chr18,chr18,chr18	+,-,-	C18orf55,FBXO15,FBXO15	-2341,-3037,-2936
chr19:19640073-19640744	chr19	+	19640190	19640780	True	NM_032037,NM_153221,NM_001190328,NM_198537	chr19,chr19,chr19,chr19	-,+,+,+	TSSK6,CILP2,YJEFN3,YJEFN3	-13721,8293,-571,-571
chr17:73126800-73127003	chr17	+	73126820	73127044	True	NM_014595,NM_024585	chr17,chr17	-,+	NT5C,ARMC7	883,-20789
chr14:32421003-32421354	chr14	+	32421002	32421400	True	NR_027263,NM_001030055	chr14,chr14	-,+	C14orf128,ARHGAP5	124555,125094
chr15:43592719-43593225	chr15	+	43593065	43593151	True	NM_001012969,NM_052955	chr15,chr15	+,-	ADAL,TGM7	29720,1352
chr10:71811620-71812475	chr10	+	71811630	71812460	True	NM_018649,NM_001198696	chr10,chr10	+,-	H2AFY2,AIFM2	-104,80280
chr1:154161530-154162316	chr1	+	154162303	154162365	True	NM_001043352,NM_001043353,NM_001043351,NM_153649,NR_030600,NM_152263,NM_001127320	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,-,+	TPM3,TPM3,TPM3,TPM3,MIR190B,TPM3,UBAP2L	-6578,-6578,-6578,-6578,3904,2294,30289
chr16:29625466-29625687	chr16	+	29625578	29625712	True	NR_002593,NM_001030288	chr16,chr16	-,+	SLC7A5P1,SPN	-540,48587
chr16:29625466-29625687	chr16	+	87903691	87903741	False	NM_001173539,NM_003486	chr16,chr16	+,-	BANP,SLC7A5	81296,-591
chr16:29625466-29625687	chr16	+	21532310	21532444	False	NM_001077180,NR_002594	chr16,chr16	+,-	METTL9,SLC7A5P2	78411,-545
chr14:96859158-96860300	chr14	+	96859350	96860032	True	NM_152327,NM_018036	chr14,chr14	+,-	AK7,ATG2B	-960,-29672
chr12:123594805-123595253	chr12	+	123594819	123595241	True	NM_020845,NM_152269	chr12,chr12	-,+	PITPNM2,C12orf65	0,122602
chr11:118973256-118973760	chr11	+	118973274	118973486	True	NM_014807,NM_001382,NM_002105	chr11,chr11,chr11	+,-,-	C2CD2L,DPAGT1,H2AFX	4606,-489,-7097
chr20:3766396-3766658	chr20	+	3766414	3766582	True	NM_021873,NM_021872,NM_001810,NM_015417,NM_004358	chr20,chr20,chr20,chr20,chr20	+,+,-,-,+	CDC25B,CDC25B,CENPB,SPEF1,CDC25B	9818,9818,805,-4312,9818
chr4:113970658-113970976	chr4	+	113970671	113971001	True	NM_001148,NM_020977,NR_029857	chr4,chr4,chr4	+,+,-	ANK2,ANK2,MIR302B	55,55,-400958
chr11:18433801-18434169	chr11	+	18433858	18434218	True	NM_017448,NM_181508,NM_002301	chr11,chr11,chr11	+,-,+	LDHC,HPS5,LDHC	-56,-90137,-56
chr2:70190731-70191034	chr2	+	70190730	70190903	True	NM_152792,NM_002357	chr2,chr2	-,+	ASPRV1,MXD1	-1333,-48608
chr1:201924625-201924862	chr1	+	201924630	201924860	True	NM_006335,NM_012134	chr1,chr1	+,-	TIMM17A,LMOD1	-62,-8914
chr3:52528134-52528679	chr3	+	52528288	52528698	True	NM_015136,NM_001134231	chr3,chr3	+,-	STAB1,NT5DC2	657,39145
chr12:48113106-48114584	chr12	+	48113747	48114549	True	NM_001172439,NM_006025,NM_001172440,NM_017842	chr12,chr12,chr12,chr12	-,-,-,+	ENDOU,ENDOU,ENDOU,SLC48A1	4856,4856,4856,52417
chr1:151295962-151297589	chr1	+	151296304	151297400	True	NM_002651,NM_001198775,NM_001198774,NM_001198773,NM_020832	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	PI4KB,PI4KB,PI4KB,PI4KB,ZNF687	2783,2783,2841,2783,-41564
chr20:56962513-56964146	chr20	+	56962732	56964059	True	NM_004738,NR_003505,NR_036633,NM_001195677	chr20,chr20,chr20,chr20	+,-,+,+	VAPB,PPP4R1L,VAPB,VAPB	115,-78237,115,115
chr20:62197823-62198131	chr20	+	62197827	62198103	True	NM_033405,NM_024059,NM_001037335	chr20,chr20,chr20	-,+,-	PRIC285,C20orf195,PRIC285	1054,-13505,7539
chr10:99444550-99446315	chr10	+	99444761	99446191	True	NM_021732,NM_031484	chr10,chr10	-,+	AVPI1,MARVELD1	874,27273
chr3:141945828-141946091	chr3	+	141945868	141945965	True	NM_001679,NM_001039547,NR_033289	chr3,chr3,chr3	+,-,-	ATP1B3,GK5,GK5	-350460,-1419,-1419
chr1:8879251-8880135	chr1	+	8879276	8880157	True	NM_001215,NM_001042681,NM_012102	chr1,chr1,chr1	+,-,-	CA6,RERE,RERE	125764,-1577,-1577
chr3:132368694-132369632	chr3	+	132368696	132369651	True	NM_032169,NM_198329,NM_024818	chr3,chr3,chr3	-,+,+	ACAD11,UBA5,UBA5	9374,3638,9488
chr4:90872003-90873734	chr4	+	90872576	90873774	True	NM_001146055,NM_007351	chr4,chr4	-,+	SNCA,MMRN1	-113129,-56575
chr5:131561233-131561434	chr5	+	131561259	131561417	True	NM_001017973,NM_001142598,NM_001142599,NM_001017974,NM_001131027,NM_004199	chr5,chr5,chr5,chr5,chr5,chr5	-,-,-,-,+,-	P4HA2,P4HA2,P4HA2,P4HA2,PDLIM4,P4HA2	1568,2189,2189,2189,31933,1568
chr14:88735336-88736401	chr14	+	88735555	88736320	True	NM_001040428,NM_138318	chr14,chr14	+,-	SPATA7,KCNK10	115667,986
chr2:108457296-108458844	chr2	+	108458568	108458642	True	NM_182588,NR_024439	chr2,chr2	+,-	RGPD4,LOC729121	-15242,-15985
chr2:108457296-108458844	chr2	-	107070204	107070278	False	NM_001144013,NR_003506	chr2,chr2	-,+	RGPD3,PLGLA	14584,-67486
chr16:1430393-1431340	chr16	+	1430476	1431220	True	NM_032520,NM_001193389,NM_023076	chr16,chr16,chr16	+,-,-	GNPTG,UNKL,UNKL	-28627,-792,-792
chr1:201389320-201390204	chr1	+	201389437	201390087	True	NM_003281,NR_026667	chr1,chr1	-,+	TNNI1,RPS10P7	837,98944
chr19:16053747-16055076	chr19	+	16053798	16054999	True	NM_001004465,NM_021187,NM_001128932	chr19,chr19,chr19	+,-,-	OR10H4,CYP4F11,CYP4F11	4818,-8122,-8122
chr11:3184369-3184613	chr11	+	3184393	3184565	True	NM_001144063,NM_020896,NM_145638,NR_027138	chr11,chr11,chr11,chr11	-,-,-,+	OSBPL5,OSBPL5,OSBPL5,C11orf36	2067,2067,2067,54996
chr3:133527120-133527589	chr3	+	133527182	133527453	True	NM_016577,NM_021203	chr3,chr3	-,+	RAB6B,SRPRB	87303,-24364
chr17:48610702-48611730	chr17	+	48610702	48611394	True	NM_017957,NM_001267	chr17,chr17	+,-	EPN3,CHAD	-705,-64475
chrX:135283042-135284061	chrX	+	135283357	135284103	True	NM_001173517,NM_001159701,NM_001159699	chrX,chrX,chrX	-,+,+	MAP7D3,FHL1,FHL1	49685,-4505,-4363
chr18:21165796-21166089	chr18	+	21165864	21166118	True	NM_013326,NM_000271	chr18,chr18	+,-	C18orf8,NPC1	-82460,513
chr12:372244-373054	chr12	+	372312	373065	True	NM_016615,NM_001190997,NM_001130147,NR_034028	chr12,chr12,chr12,chr12	-,-,+,-	SLC6A13,SLC6A13,CCDC77,SLC6A13	-273,-273,125450,-273
chr12:104350763-104350978	chr12	+	104350768	104350994	True	NM_003211,NM_001135570	chr12,chr12	+,-	TDG,C12orf73	8598,49
chr12:110723887-110724773	chr12	+	110724020	110724764	True	NM_001135765,NM_170665,NM_001681,NM_016238	chr12,chr12,chr12,chr12	+,+,+,-	ATP2A2,ATP2A2,ATP2A2,ANAPC7	-5044,-5044,-5044,116828
chr4:110482321-110483044	chr4	+	110482326	110482871	True	NM_017918,NM_001226	chr4,chr4	+,-	CCDC109B,CASP6	-1022,141814
chr4:113436084-113436355	chr4	+	113436134	113436332	True	NM_016648,NM_024019	chr4,chr4	+,-	LARP7,NEUROG2	121787,1046
chr12:58213257-58213575	chr12	+	58213419	58213509	True	NR_029847,NM_001172697,NM_006576	chr12,chr12,chr12	-,+,-	MIR26A2,TSFM,AVIL	5016,-36942,-3567
chr12:109920486-109921185	chr12	+	109920596	109921228	True	NM_183415,NM_031954,NM_130466	chr12,chr12,chr12	+,-,+	UBE3B,KCTD10,UBE3B	-5208,-5441,-5208
chr1:233085221-233086026	chr1	+	233085221	233086051	True	NM_032324,NM_014801	chr1,chr1	+,-	NTPCR,PCNXL2	318,345458
chr1:46973654-46974438	chr1	+	46973890	46974432	True	NM_147192,NM_001097611,NM_172225	chr1,chr1,chr1	+,-,+	DMBX1,KNCN,DMBX1	-1273,42505,-1273
chr13:50072550-50074187	chr13	+	50072628	50074174	True	NM_001079670,NM_001040444,NM_001040443	chr13,chr13,chr13	-,+,+	CAB39L,PHF11,PHF11	-54407,-2158,-2885
chr20:61991314-61991801	chr20	+	61991397	61991799	True	NM_020882,NM_000744	chr20,chr20	+,-	COL20A1,CHRNA4	-66910,946
chr2:85817496-85818191	chr2	+	85817571	85818231	True	NM_016494,NM_001031738,NM_006634	chr2,chr2,chr2	+,-,+	RNF181,TMEM150A,VAMP5	4605,11641,-6091
chr19:35850838-35851441	chr19	+	35850861	35851439	True	NM_005303,NM_207392,NM_005304	chr19,chr19,chr19	+,-,+	FFAR1,KRTDAP,FFAR3	-8467,129967,-1424
chr19:35850838-35851441	chr19	+	35863410	35863907	False	NM_207392,NM_005304	chr19,chr19	-,+	KRTDAP,FFAR3	117499,-13973
chr12:50695921-50696644	chr12	+	50696055	50696644	True	NM_016357,NM_001170804	chr12,chr12	-,+	LIMA1,LARP4	-18702,97947
chr20:3778245-3779187	chr20	+	3778328	3779169	True	NM_021873,NM_021872,NM_001810,NM_004358	chr20,chr20,chr20,chr20	+,+,-,+	CDC25B,CDC25B,CENPB,CDC25B	-1978,-1978,-10991,-1978
chr10:99092163-99092501	chr10	+	99092302	99092481	True	NM_005479,NM_012083	chr10,chr10	+,-	FRAT1,FRAT2	-13332,2027
chr17:7323683-7323901	chr17	+	7323709	7323857	True	NM_152766,NM_199339,NM_175734	chr17,chr17,chr17	-,+,+	C17orf61,SPEM1,C17orf74	-16259,-81,5077
chrX:106241559-106242076	chrX	+	106241633	106242075	True	NM_001085354,NM_020384,NM_024657	chrX,chrX,chrX	-,+,-	MORC4,CLDN2,MORC4	1449,-78079,1449
chr3:128841420-128843071	chr3	+	128841569	128842701	True	NM_198490,NM_001204888,NM_001204885,NM_001204884,NM_001204887,NM_001204886,NM_001204883,NM_000174	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,-,-,-,+	RAB43,RAB43,RAB43,RAB43,RAB43,RAB43,RAB43,GP9	-922,-922,-804,-712,-922,-922,-576,-61975
chr16:30042558-30042864	chr16	+	30042783	30042913	True	NM_031478,NM_001109660,NM_001109659	chr16,chr16,chr16	-,+,+	FAM57B,C16orf92,C16orf92	-597,-8179,-8179
chr13:31039044-31039271	chr13	+	31039243	31039317	True	NM_005800,NM_002128	chr13,chr13	+,-	USPL1,HMGB1	152512,814
chrX:119694650-119694951	chrX	+	119694656	119694961	True	NM_014060,NM_001079872	chrX,chrX	+,-	MCTS1,CUL4B	42782,-76
chr2:85979224-85979503	chr2	+	85979229	85979475	True	NM_198843,NM_032827	chr2,chr2	-,+	SFTPB,ATOH8	-83365,1433
chr1:14717955-14718931	chr1	+	14718030	14718954	True	NM_015209,NR_027136	chr1,chr1	+,-	KAZN,C1orf126	206258,760056
chr11:58978298-58978544	chr11	+	58978398	58978538	True	NM_001039396,NM_015177	chr11,chr11	-,+	MPEG1,DTX4	2006,-38637
chr9:36256535-36257520	chr9	+	36256574	36257442	True	NM_001190383,NM_007096,NM_001190384,NM_005476	chr9,chr9,chr9,chr9	-,+,-,-	GNE,CLTA,GNE,GNE	1104,-65780,1104,1104
chr1:119681898-119682313	chr1	+	119682073	119682332	True	NM_001005783,NM_201263,NM_015836	chr1,chr1,chr1	+,-,-	HAO2,WARS2,WARS2	229069,1026,1026
chr5:176901451-176902177	chr5	+	176901511	176901953	True	NM_001174102,NM_080881,NM_004395	chr5,chr5,chr5	+,-,-	PRR7,DBN1,DBN1	-26236,-1640,-817
chr10:104002540-104004438	chr10	+	104003022	104004471	True	NM_001199378,NM_001199379,NM_005029,NM_004193	chr10,chr10,chr10,chr10	+,+,-,+	GBF1,GBF1,PITX3,GBF1	783,783,-1791,783
chr14:77796636-77797501	chr14	+	77796663	77797429	True	NM_001513,NM_145870,NM_145871,NM_013382	chr14,chr14,chr14,chr14	+,+,+,-	GSTZ1,GSTZ1,GSTZ1,POMT2	-9008,-9484,-9484,-9438
chr15:58361121-58363010	chr15	+	58361223	58362946	True	NM_170696,NM_020980,NM_003888	chr15,chr15,chr15	-,+,-	ALDH1A2,AQP9,ALDH1A2	-3317,67461,-3317
chr15:43517671-43518022	chr15	+	43517734	43518027	True	NM_000119,NM_001114134,NM_037370	chr15,chr15,chr15	-,-,+	EPB42,EPB42,CCNDBP1	-4411,-4411,-39647
chr1:248284929-248285261	chr1	+	248284954	248285216	True	NR_002141,NM_001004695	chr1,chr1	+,-	OR2M1P,OR2T33	221,151952
chrX:134123676-134124837	chrX	+	134124276	134124873	True	NM_001163438,NM_001078173	chrX,chrX	+,-	LOC644538,FAM127C	94,31743
chr20:36147984-36148273	chr20	+	36148117	36148261	True	NM_005386,NM_001167821,NM_001167820,NM_001167823,NM_001167822,NM_006698,NM_181689	chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,-,-,-,-,-,+	NNAT,BLCAP,BLCAP,BLCAP,BLCAP,BLCAP,NNAT	1345,7923,8122,4742,7872,8122,1345
chr14:82382565-82383994	chr14	+	82382604	82384024	True	NM_005065,NM_000369	chr14,chr14	-,+	SEL1L,TSHR	-382399,-960786
chr8:11724124-11724438	chr8	+	11724360	11724435	True	NM_001908,NM_147782,NM_147783,NM_147780,NM_147781,NM_004462	chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,-,+	CTSB,CTSB,CTSB,CTSB,CTSB,FDFT1	1262,1262,1262,1262,1262,-64221
chr3:42639910-42640616	chr3	+	42640156	42640362	True	NM_001201572,NM_016305,NM_005385	chr3,chr3,chr3	-,+,+	SEC22C,SS18L2,NKTR	2260,-7916,1784
chr1:159772154-159773416	chr1	+	159772272	159773464	True	NM_001134233,NM_001004310	chr1,chr1	-,+	C1orf204,FCRL6	51723,-150
chrX:79266893-79268108	chrX	+	79266926	79267999	True	NM_001109878,NM_001109879,NM_004867,NM_016954	chrX,chrX,chrX,chrX	+,+,-,+	TBX22,TBX22,ITM2A,TBX22	2255,2255,-643877,9742
chr2:10825119-10825541	chr2	+	10825144	10825375	True	NM_001039362,NM_024894	chr2,chr2	+,-	ATP6V1C2,NOL10	36399,4796
chrX:46618895-46620438	chrX	+	46618930	46620226	True	NM_032591,NM_006915	chrX,chrX	-,+	SLC9A7,RP2	-458,76120
chr16:75150539-75151660	chr16	+	75150731	75151597	True	NM_153486,NM_194436,NM_153688	chr16,chr16,chr16	-,-,+	LDHD,LDHD,ZFP1	-61,-61,30823
chr10:26877136-26877377	chr10	+	26877139	26877398	True	NM_001012750,NR_026793	chr10,chr10	-,+	ABI1,NCRNA00264	272671,1395
chr1:150593908-150595264	chr1	+	150594111	150595036	True	NM_207168,NM_004436,NM_207045,NM_207046,NM_207047,NM_207042,NM_207043,NM_207044,NR_036211	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,-,-,-,+	ENSA,ENSA,ENSA,ENSA,ENSA,ENSA,ENSA,ENSA,MIR4257	7113,7113,6624,6624,6624,7113,7113,7113,-69758
chr6:2753281-2753530	chr6	+	2753281	2753555	True	NM_001012418,NM_020135	chr6,chr6	-,+	MYLK4,WRNIP1	-2127,12110
chr1:47399683-47399891	chr1	+	47399690	47399782	True	NM_000778,NM_178033	chr1,chr1	-,+	CYP4A11,CYP4X1	7424,89457
chr1:47399683-47399891	chr1	-	47610477	47610569	False	NM_005764,NM_001010969	chr1,chr1	-,+	PDZK1IP1,CYP4A22	45252,-7421
chr16:25269854-25271108	chr16	+	25269954	25270719	True	NM_001012981,NM_001169	chr16,chr16	-,+	ZKSCAN2,AQP8	-1099,-41720
chr15:69607314-69608578	chr15	+	69607319	69608373	True	NM_001104554,NM_006305	chr15,chr15	+,-	PAQR5,ANP32A	-628,-494058
chr11:11644159-11644930	chr11	+	11644171	11644945	True	NM_198516,NM_017944	chr11,chr11	-,+	GALNTL4,USP47	-610,218024
chr6:31164592-31164846	chr6_dbb_hap3	+	2461872	2461956	False	NR_026816,NR_026791	chr6_dbb_hap3,chr6_dbb_hap3	-,+	PSORS1C3,HCG27	-19054,720
chr6:31164592-31164846	chr6	+	31164730	31164814	True	NR_026816,NR_026791	chr6,chr6	-,+	PSORS1C3,HCG27	-19054,722
chr6:31164592-31164846	chr6_ssto_hap7	+	2499675	2499759	False	NR_026816,NR_026791	chr6_ssto_hap7,chr6_ssto_hap7	-,+	PSORS1C3,HCG27	-19045,722
chr6:31164592-31164846	chr6_cox_hap2	+	2679505	2679589	False	NR_026816,NR_026791	chr6_cox_hap2,chr6_cox_hap2	-,+	PSORS1C3,HCG27	-19058,720
chr19:10984608-10984924	chr19	+	10984646	10984972	True	NM_199141,NM_006858	chr19,chr19	+,-	CARM1,TMED1	-2452,-37663
chr2:904511-905221	chr2	+	904553	905267	True	NM_018968,NR_033880	chr2,chr2	+,-	SNTG2,LOC339822	41286,-40441
chr1:110755371-110756210	chr1	+	110755377	110756101	True	NR_036437,NM_001039574,NR_036595,NM_004978	chr1,chr1,chr1,chr1	+,+,-,+	KCNC4,KCNC4,LOC440600,KCNC4	-2092,-2092,125742,-2092
chr1:221912480-221913889	chr1	+	221912484	221913860	True	NM_021958,NM_144729,NM_144728,NM_007207	chr1,chr1,chr1,chr1	+,-,-,-	HLX,DUSP10,DUSP10,DUSP10	-859792,1706,-1682,1706
chr17:37894942-37895147	chr17	+	37895072	37895168	True	NM_032339,NM_001030002,NM_005310	chr17,chr17,chr17	-,+,+	C17orf37,GRB7,GRB7	-8284,-533,-936
chr8:23540466-23541280	chr8	+	23540793	23541325	True	NM_006167,NM_016612	chr8,chr8	-,+	NKX3-1,SLC25A37	-343,-154481
chr17:1386181-1386880	chr17	+	1386302	1386836	True	NM_001080779,NM_001080950,NR_028514,NM_033375	chr17,chr17,chr17,chr17	-,-,+,-	MYO1C,MYO1C,LOC100306951,MYO1C	9215,2265,33376,8186
chr19:50017432-50017748	chr19	+	50017510	50017776	True	NM_004107,NM_001136019,NR_029703	chr19,chr19,chr19	+,+,-	FCGRT,FCGRT,MIR150	-1125,-2025,-13385
chr22:23744068-23744293	chr22	+	23744116	23744342	True	NR_033408,NR_003950	chr22,chr22	+,-	FBXW4P1,ZDHHC8P1	-139213,507
chr6:42418734-42419395	chr6	+	42418892	42419296	True	NM_001184801,NM_033502	chr6,chr6	+,-	UBR2,TRERF1	112463,537
chr7:17053820-17055345	chr7	+	17054089	17055336	True	NM_176813,NM_014399	chr7,chr7	-,+	AGR3,TSPAN13	-132476,-260801
chr12:95044262-95044478	chr12	+	95044302	95044527	True	NM_020698,NR_030171	chr12,chr12	-,+	TMCC3,MIR492	10,183646
chr16:74703132-74704637	chr16	+	74703282	74704341	True	NM_018124,NM_032268	chr16,chr16	-,+	RFWD3,ZNRF1	-2503,328573
chr3:150476620-150476987	chr3	+	150476955	150477038	True	NM_005067,NM_016275	chr3,chr3	-,+	SIAH2,SELT	4278,-155940
chr1:21608705-21609525	chr1	+	21609166	21609427	True	NM_001113347,NM_032264,NM_001113349,NM_001397	chr1,chr1,chr1,chr1	-,+,-,-	ECE1,NBPF3,ECE1,ECE1	-2983,157203,7402,7618
chr11:1075839-1076182	chr11	+	1075847	1076079	True	NM_002457,NM_005961	chr11,chr11	+,-	MUC2,MUC6	-1023,-39141
chr17:78073617-78073986	chr17	+	78073655	78073911	True	NM_001079804,NM_001079803,NM_014740,NM_000152	chr17,chr17,chr17,chr17	+,+,-,+	GAA,GAA,EIF4A3,GAA	1443,1443,47121,1443
chr21:34774438-34774840	chr21	+	34774584	34774862	True	NM_005534,NM_006134	chr21,chr21	+,-	IFNGR2,TMEM50B	339,77469
chrX:151288270-151288833	chrX	+	151288497	151288869	True	NM_001011550,NM_021049	chrX,chrX	+,-	MAGEA4,MAGEA5	-201788,-2053
chr20:1181417-1182442	chr20	+	1182099	1182263	True	NM_018354,NM_001009612	chr20,chr20	-,+	C20orf46,C20orf202	-16982,1834
chr1:95540916-95542226	chr1	+	95541009	95541724	True	NM_001199679,NM_144988	chr1,chr1	+,-	TMEM56,ALG14	16348,-2502
chr7:151325568-151326332	chr7	+	151325794	151326301	True	NR_034013,NM_024429	chr7,chr7	+,-	LOC100131176,PRKAG2	-219525,3100
chr15:42486804-42487520	chr15	+	42486955	42487363	True	NM_198141,NR_030357	chr15,chr15	+,-	GANC,MIR627	79002,4552
chr17:76372881-76373081	chr17	+	76372884	76373054	True	NM_003955,NM_024419	chr17,chr17	-,+	SOCS3,PGS1	-16726,1680
chr8:133894798-133895215	chr8	+	133894802	133895162	True	NM_003235,NM_144649	chr8,chr8	+,-	TG,TMEM71	-15648,-121888
chr21:38378034-38378302	chr21	+	38378049	38378189	True	NM_000411,NM_018962	chr21,chr21	-,+	HLCS,DSCR6	-15513,673
chr19:34747037-34747242	chr19	+	34747037	34747122	True	NR_027620,NM_014686	chr19,chr19	-,+	LOC643719,KIAA0355	321531,-1633
chr3:196670364-196671755	chr3	+	196670410	196671437	True	NM_007362,NR_024388,NM_001042540	chr3,chr3,chr3	-,+,-	NCBP2,LOC152217,NCBP2	-946,-967,-946
chr22:39098475-39098901	chr22	+	39098771	39098845	True	NM_014876,NM_004286	chr22,chr22	-,+	JOSD1,GTPBP1	-2312,2961
chr15:25301439-25302116	chr15	+	25301443	25301895	True	NR_003317,NR_003316,NR_003320,NR_003321,NR_003324,NR_003322,NR_003319,NR_003318,NM_130838	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,-	SNORD116-2,SNORD116-1,SNORD116-5,SNORD116-6,SNORD116-9,SNORD116-7,SNORD116-4,SNORD116-3,UBE3A	-2145,-4878,5583,8276,110,5583,2788,110,348808
chr20:43101128-43101751	chr20	+	43101325	43101679	True	NM_198941,NM_024331,NM_001039199	chr20,chr20,chr20	-,+,+	SERINC3,TTPAL,TTPAL	49099,2867,2867
chr11:62414424-62414698	chr11	+	62414501	62414709	True	NM_001043229,NM_030628,NM_198335,NM_198334	chr11,chr11,chr11,chr11	+,-,-,-	METTL12,INTS5,GANAB,GANAB	18069,6115,-397,-397
chr5:134367670-134368207	chr5	+	134367752	134368234	True	NM_002653,NM_178019	chr5,chr5	-,+	PITX1,CATSPER3	1786,-64207
chr20:3868255-3868954	chr20	+	3868268	3868795	True	NM_024960,NM_153638,NM_153640,NR_031722	chr20,chr20,chr20,chr20	+,+,+,-	PANK2,PANK2,PANK2,MIR103-2AS	690,946,1667,29466
chr4:141214630-141215500	chr4	+	141214681	141215514	True	NM_032547,NR_033939	chr4,chr4	+,-	SCOC,LOC100129858	-36292,79082
chr4:16083817-16084124	chr4	+	16083848	16084114	True	NM_001145849,NM_001145848,NM_001145847,NM_001145850,NM_001145851,NM_001145852,NM_006017,NR_027696	chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4	-,-,-,-,-,-,-,+	PROM1,PROM1,PROM1,PROM1,PROM1,PROM1,PROM1,FLJ39653	-6107,1559,1530,-6107,-6107,-6107,-6107,144171
chr9:140498972-140499237	chr9	+	140499020	140499086	True	NM_152285,NM_138462	chr9,chr9	+,-	ARRDC1,ZMYND19	1009,-14083
chr6:26221695-26222255	chr6	+	26221749	26222055	True	NM_003518,NM_003532,NM_021052	chr6,chr6,chr6	-,+,+	HIST1H2BG,HIST1H3E,HIST1H2AE	-4877,3327,-4662
chr21:43431544-43432615	chr21	+	43432140	43432586	True	NR_027273,NM_020727,NM_001098402,NM_001098403	chr21,chr21,chr21,chr21	+,-,-,-	C21orf121,ZNF295,ZNF295,ZNF295	9526,-1644,-1644,-1644
chr17:62077518-62077848	chr17	+	62077570	62077677	True	NM_001164257,NM_001191029,NM_001191031,NM_001191030,NM_000873	chr17,chr17,chr17,chr17,chr17	+,+,+,+,-	C17orf72,C17orf72,C17orf72,C17orf72,ICAM2	-1910,-1910,-1910,-1910,6663
chr16:2878641-2878843	chr16	+	2878660	2878888	True	NR_026864,NM_145252	chr16,chr16	-,+	PRSS30P,ZG16B	13914,1284
chr10:97802134-97803043	chr10	+	97802201	97802968	True	NM_001134375,NM_019084,NR_036113,NM_001134376	chr10,chr10,chr10,chr10	+,+,-,+	CCNJ,CCNJ,MIR3157,CCNJ	190,190,21238,190
chr11:67224791-67225895	chr11	+	67224810	67225903	True	NM_145200,NM_206997	chr11,chr11	+,-	CABP4,GPR152	-2043,-4610
chr19:50193735-50194073	chr19	+	50193784	50194110	True	NM_001101340,NM_001136052,NM_001571,NM_152359,NM_001199752,NM_001199753	chr19,chr19,chr19,chr19,chr19,chr19	+,+,-,+,+,+	C19orf76,CPT1C,IRF3,CPT1C,CPT1C,CPT1C	-1893,254,-24652,254,254,254
chr3:63083275-63084243	chr3	+	63083353	63084289	True	NM_183394,NR_027104	chr3,chr3	-,+	CADPS,LOC285401	-222289,4074
chr11:85357519-85358910	chr11	+	85357989	85358893	True	NM_001039618,NM_032273	chr11,chr11	-,+	CREBZF,TMEM126A	17339,69
chr15:37393280-37393665	chr15	+	37393292	37393704	True	NM_170674,NM_170675,NM_170676,NM_170677,NM_172315,NM_172316,NM_002399,NM_032499	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,-,-,-,-,-,-,+	MEIS2,MEIS2,MEIS2,MEIS2,MEIS2,MEIS2,MEIS2,C15orf41	-588,-588,-588,-588,-2789,-1695,38,-460546
chr2:204198747-204200192	chr2	+	204199151	204200110	True	NM_213589,NM_005759	chr2,chr2	-,+	RAPH1,ABI2	199998,-6208
chr2:27604417-27605783	chr2	+	27604784	27605666	True	NM_001201459,NM_014748,NM_144631	chr2,chr2,chr2	-,+,-	ZNF513,SNX17,ZNF513	-1473,-11446,-1173
chr2:23624212-23624619	chr2	+	23624238	23624518	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	525466,-15991
chr12:107350726-107351305	chr12	+	107350755	107351326	True	NM_001033050,NM_152261	chr12,chr12	-,+	MTERFD3,C12orf23	29660,-1267
chr15:65325709-65326959	chr15	+	65325830	65326826	True	NM_178859,NM_139242	chr15,chr15	+,-	OSTBETA,MTFMT	10881,-3853
chr6:111132744-111133079	chr6	+	111132743	111132963	True	NM_001634,NM_015076	chr6,chr6	+,-	AMD1,CDK19	63023,3506
chr16:57769097-57769651	chr16	+	57769156	57769699	True	NM_001130099,NM_005886	chr16,chr16	-,+	KIFC3,KATNB1	62280,-40
chr16:8889037-8889940	chr16	+	8889122	8889902	True	NM_000303,NM_015421	chr16,chr16	+,-	PMM2,TMEM186	1767,1653
chr5:25908296-25909386	chr5	+	25908354	25909243	True	NR_037896,NM_020227	chr5,chr5	-,+	LOC340107,PRDM9	-1067662,-2400685
chr3:158447397-158447831	chr3	+	158447578	158447833	True	NM_206963,NM_002888,NM_001167903	chr3,chr3,chr3	-,-,+	RARRES1,RARRES1,MFSD1	2493,2493,71881
chr7:155605391-155606517	chr7	+	155605420	155606445	True	NM_000193,NM_053043	chr7,chr7	-,+	SHH,RBM33	-453,-168269
chrX:70149577-70150288	chrX	+	70149664	70150237	True	NM_001048164,NM_032803,NM_001170931	chrX,chrX,chrX	-,-,+	SLC7A3,SLC7A3,FOXO4	795,795,165761
chr21:15221746-15222020	chr21	+	15221801	15222007	True	NM_174981,NR_026755	chr21,chr21	+,-	POTED,C21orf15	-239354,-1116
chr3:77149954-77151336	chr3	+	77150106	77151254	True	NM_001128929,NM_001128223	chr3,chr3	+,-	ROBO2,ZNF717	-2995,-1315851
chr18:160177-161221	chr18	+	160581	161279	True	NM_005131,NM_005151,NM_001037334	chr18,chr18,chr18	-,+,+	THOC1,USP14,USP14	106839,-2159,-2159
chr3:66552408-66553918	chr3	+	66552525	66553906	True	NR_028475,NM_015541	chr3,chr3	+,-	SLC25A26,LRIG1	-281408,-1680
chr20:60961815-60962024	chr20	+	60961921	60962071	True	NM_001024,NM_005560	chr20,chr20	+,-	RPS21,LAMA5	49,-19553
chr13:41495575-41495816	chr13	+	41495629	41495847	True	NR_030352,NR_003365	chr13,chr13	+,-	MIR621,SUGT1P3	-110778,89
chr19:18061153-18061588	chr19	+	18061179	18061551	True	NM_002248,NM_000215	chr19,chr19	+,-	KCNN1,JAK3	559,-102338
chr9:118918195-118919450	chr9	+	118918221	118919475	True	NM_002581,NR_024032	chr9,chr9	+,-	PAPPA,C9orf27	-2201,-230844
chr17:45501673-45502227	chr17	+	45501820	45502190	True	NR_027416,NR_033934	chr17,chr17	+,-	LOC100272146,MRPL45P2	-1035,67854
chr12:16506784-16508633	chr12	+	16507187	16508663	True	NM_145792,NM_145791,NM_001170798,NM_020300,NM_145764	chr12,chr12,chr12,chr12,chr12	+,+,-,+,+	MGST1,MGST1,SLC15A5,MGST1,MGST1	-7163,-6527,-76568,-6660,-888
chr2:42652030-42652250	chr2	+	42652034	42652158	True	NM_020744,NM_004718	chr2,chr2	+,-	MTA3,COX7A2L	143512,-63678
chr14:69728993-69729687	chr14	+	69729039	69729545	True	NM_003861,NM_020692,NM_001168368	chr14,chr14,chr14	-,+,+	DCAF5,GALNTL1,GALNTL1	-109125,-2409,-2409
chr8:135795753-135796220	chr8	+	135795779	135796269	True	NR_029666,NR_002438	chr8,chr8	-,+	MIR30B,ZFAT-AS1	16631,-185527
chrX:50653523-50653962	chrX	+	50653573	50654011	True	NM_005448,NR_027121,NR_003933	chrX,chrX,chrX	+,-,+	BMP15,SHROOM4,LOC347376	-17,-96529,-5192
chrX:21777642-21777997	chrX	+	21777653	21778011	True	NM_015884,NM_014332	chrX,chrX	+,-	MBTPS2,SMPX	79644,-1423
chr17:46655094-46655361	chr17	+	46655213	46655383	True	NM_024015,NR_029608,NM_002146,NR_033201	chr17,chr17,chr17,chr17	-,-,-,+	HOXB4,MIR10A,HOXB3,LOC404266	410,1976,-3403,12439
chr11:126048436-126050287	chr11	+	126048774	126049914	True	NM_001144827,NM_024556	chr11,chr11	-,+	RPUSD4,FAM118B	31723,31704
chr2:263567-263896	chr2	+	263617	263885	True	NM_007099,NM_001040649,NM_004300,NR_024080,NM_001159597,NM_015677	chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,-,-	ACP1,ACP1,ACP1,ACP1,SH3YL1,SH3YL1	983,983,983,983,233,233
chr21:35743845-35744488	chr21	+	35743998	35744459	True	NM_001127670,NM_058182,NM_172201	chr21,chr21,chr21	-,+,+	KCNE1,FAM165B,KCNE2	83654,3289,-7732
chr19:47291830-47292036	chr19	+	47291831	47292051	True	NM_001145144,NM_001145145,NM_005628,NM_024301	chr19,chr19,chr19,chr19	-,-,-,+	SLC1A5,SLC1A5,SLC1A5,FKRP	-1286,-3697,5,-42579
chr12:50896182-50897083	chr12	+	50896390	50896823	True	NM_173602,NM_001145475	chr12,chr12	+,-	DIP2B,FAM186A	1944,-105985
chr3:69914803-69915121	chr3	+	69914849	69915161	True	NM_015123,NM_198177	chr3,chr3	-,+	FRMD4B,MITF	-479419,213
chr1:1676447-1676939	chr1	+	1676603	1676974	True	NM_182838,NM_001199787,NR_002946	chr1,chr1,chr1	-,-,+	SLC35E2,SLC35E2,MMP23A	514,514,-45276
chr1:1676447-1676939	chr1	+	1623328	1623699	False	NR_002946,NM_001110781	chr1,chr1	+,-	MMP23A,SLC35E2B	7678,594
chr7:82073071-82073337	chr7	+	82073214	82073360	True	NM_000722,NM_001127444	chr7,chr7	-,+	CACNA2D1,CD36	-183,-1797503
chr21:15558055-15559786	chr21	+	15558341	15559800	True	NM_144770,NM_198996	chr21,chr21	+,-	RBM11,LIPI	28665,19505
chr3:113876059-113876871	chr3	+	113876238	113876623	True	NM_000796,NM_024638	chr3,chr3	-,+	DRD3,QTRTD1	21333,-100682
chr2:188373535-188375321	chr2	+	188374569	188375061	True	NM_006287,NM_016315	chr2,chr2	-,+	TFPI,GULP1	44208,782328
chr2:74010303-74010619	chr2	+	74010347	74010616	True	NM_001080474,NM_003584	chr2,chr2	+,-	C2orf78,DUSP11	699,-3063
chr3:146218134-146218657	chr3	+	146218264	146218633	True	NM_003412,NM_001199979	chr3,chr3	+,-	ZIC1,PLSCR2	908547,-4486
chr14:56066314-56068198	chr14	+	56066492	56067966	True	NR_027123,NM_182926	chr14,chr14	-,+	C14orf33,KTN1	-19682,-19626
chr3:171178039-171178348	chr3	+	171178135	171178287	True	NM_015028,NM_001164436,NR_027767,NM_001161566,NM_001161564,NM_001161565,NM_001161562,NM_001161563,NM_001161560,NM_001161561	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-,-,-,-,-	TNIK,TMEM212,TNIK,TNIK,TNIK,TNIK,TNIK,TNIK,TNIK,TNIK	26,382851,26,26,26,26,26,26,26,26
chr22:25003208-25003457	chr22	+	25003394	25003456	True	NM_005265,NM_207644,NM_001032365,NM_001032364	chr22,chr22,chr22,chr22	+,-,+,+	GGT1,C22orf36,GGT1,GGT1	-4265,-14359,169,-4321
chr14:23307010-23307230	chr14	+	23307078	23307140	True	NM_004995,NM_181304,NM_181305,NM_181306,NM_181307,NM_180982,NM_001126106,NM_178336	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	+,+,+,+,+,+,-,+	MMP14,MRPL52,MRPL52,MRPL52,MRPL52,MRPL52,SLC7A7,MRPL52	-1336,-8037,-8037,-8037,-8037,-8037,-18064,-8037
chr2:61369324-61369792	chr2	+	61369360	61369690	True	NR_036496,NM_001143960	chr2,chr2	-,+	LOC339803,C2orf74	2470,2552
chr5:54323608-54324223	chr5	+	54323733	54324243	True	NM_002104,NM_007036	chr5,chr5	+,-	GZMK,ESM1	-3678,-42319
chr11:125699576-125700136	chr11	+	125699713	125700169	True	NM_001144874,NM_212555	chr11,chr11	+,-	PATE4,PATE2	3041,-50999
chr2:219135785-219136149	chr2	+	219135785	219136145	True	NM_015488,NM_001087,NM_001077399	chr2,chr2,chr2	+,-,+	PNKD,AAMP,PNKD	-721,-892,-721
chr1:67896120-67896516	chr1	+	67896159	67896521	True	NM_001018068,NM_001018069,NM_001559,NM_015640,NM_001018067	chr1,chr1,chr1,chr1,chr1	-,-,+,-,-	SERBP1,SERBP1,IL12RB2,SERBP1,SERBP1	-36,-36,-123163,-36,-36
chr9:139139305-139139600	chr9	+	139139361	139139563	True	NM_015597,NM_181701	chr9,chr9	+,-	GPSM1,QSOX2	82368,-1674
chr1:53159987-53160888	chr1	+	53160232	53160622	True	NM_024646,NM_023077	chr1,chr1	+,-	ZYG11B,SELRC1	31508,3466
chr7:97913047-97913860	chr7	+	97913103	97913901	True	NM_001159491,NM_015395,NM_015379	chr7,chr7,chr7	+,-,+	BRI3,TECPR1,BRI3	-2175,-31635,-2175
chr16:86611889-86612196	chr16	+	86611902	86612124	True	NM_005250,NR_027490	chr16,chr16	+,-	FOXL1,MTHFSD	-10,-23061
chr7:30952922-30953857	chr7	+	30953160	30953700	True	NM_001185061,NM_001185060,NM_001185062,NM_001202481,NM_198098	chr7,chr7,chr7,chr7,chr7	+,+,+,-,+	AQP1,AQP1,AQP1,CRHR2,AQP1	7404,7214,7418,-213441,-1796
chr2:118572274-118572502	chr2	+	118572283	118572433	True	NM_019044,NM_006773	chr2,chr2	-,+	CCDC93,DDX18	199356,-79
chr14:92572752-92572986	chr14	+	92572852	92572916	True	NM_001164776,NM_001164777,NR_028453,NR_028457,NR_028456,NR_028455,NR_028454,NM_001164778,NM_001164779,NR_028459,NR_028458,NR_028470,NM_017437,NR_031765,NM_001164781,NM_001164780,NM_001164782,NM_004993,NR_028468,NR_028469,NR_028466,NR_028467,NR_028464,NR_028465,NR_028462,NR_028463,NR_028460,NR_028461,NM_030660,NM_001127696,NM_001127697,NM_001164774	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	-,-,-,-,-,-,-,-,-,-,-,-,+,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-	ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,CPSF2,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3,ATXN3	99,99,99,99,99,99,99,99,99,99,99,99,15381,99,99,99,99,99,99,99,99,99,99,99,99,99,99,99,99,99,99,99
chr15:56036496-56037630	chr15	+	56036700	56037417	True	NM_173814,NM_001198784	chr15,chr15	-,+	PRTG,FLJ27352	-1523,-336035
chr9:74382819-74383076	chr9	+	74382822	74383036	True	NM_001135820,NM_013390,NM_182505	chr9,chr9,chr9	-,-,+	TMEM2,TMEM2,C9orf85	814,814,143386
chr20:21378195-21378547	chr20	+	21378224	21378567	True	NM_012255,NM_033176	chr20,chr20	+,-	XRN2,NKX2-4	-94333,-177
chr11:107479217-107480361	chr11	+	107479217	107480393	True	NM_138775,NR_028328	chr11,chr11	-,+	ALKBH8,LOC643923	-42756,-16798
chr7:55638489-55639316	chr7	+	55638673	55639339	True	NM_018697,NM_030796	chr7,chr7	+,-	LANCL2,VOPP1	-205595,911
chr22:44577293-44577513	chr22	+	44577311	44577437	True	NR_024426,NR_024427,NM_022141,NM_001099294,NM_001137605,NM_001137606,NR_024428	chr22,chr22,chr22,chr22,chr22,chr22,chr22	+,+,+,-,+,+,+	PARVG,PARVG,PARVG,KIAA1644,PARVG,PARVG,PARVG	-592,-8526,-592,131344,-8526,-105,-146
chr1:109751070-109752906	chr1	+	109751262	109752853	True	NM_006513,NM_001005290,NR_034072	chr1,chr1,chr1	+,-,+	SARS,PSRC1,SARS	3661,72987,3661
chr2:61293713-61294592	chr2	+	61293717	61294573	True	NM_032506,NM_144709,NM_001129993	chr2,chr2,chr2	+,-,+	KIAA1841,PUS10,KIAA1841	-405,-48352,-762
chr2:110363914-110364458	chr2	+	110364015	110364190	True	NM_023016,NM_178584,NM_144710	chr2,chr2,chr2	+,-,-	ANKRD57,SEPT10,SEPT10	7720,7652,7652
chr10:91062601-91064032	chr10	+	91062665	91063981	True	NM_001547,NM_000235	chr10,chr10	+,-	IFIT2,LIPA	-1010,-51005
chr7:75724000-75724354	chr7	+	75724002	75724249	True	NM_005918,NM_016086	chr7,chr7	+,-	MDH2,STYXL1	-46660,-46681
chr7:75724000-75724354	chr7	+	65867360	65867418	False	NR_026873,NM_003596	chr7,chr7	-,+	NCRNA00174,TPST1	-1965,-197160
chr3:8811025-8811254	chr3	+	8811024	8811302	True	NM_001234,NM_000916	chr3,chr3	+,-	CAV3,OXTR	-35579,48
chr20:13977610-13979455	chr20	+	13977669	13978779	True	NM_080676,NM_025229	chr20,chr20	+,-	MACROD2,SEL1L2	-1574,-6407
chr17:60216147-60216490	chr19	+	621826	622178	False	NM_005035,NM_020637	chr19,chr19	-,+	POLRMT,FGF22	11742,17747
chr17:60216147-60216490	chr17	+	60216152	60216458	True	NM_001144933,NM_005121	chr17,chr17	+,-	EFCAB3,MED13	231120,-73509
chr16:50711494-50712641	chr16	+	50711652	50712656	True	NM_153337,NM_022162,NM_182854,NM_001144972	chr16,chr16,chr16,chr16	-,+,-,-	SNX20,NOD2,SNX20,SNX20	2658,18393,2658,2658
chr1:205649605-205649892	chr1	+	205649746	205649904	True	NM_033102,NM_181644	chr1,chr1	-,+	SLC45A3,MFSD4	-116,-111685
chr11:93074860-93075390	chr11	+	93074978	93075382	True	NM_152313,NM_181645	chr11,chr11	-,+	SLC36A4,CCDC67	-143883,-11146
chr19:9362135-9363579	chr19	+	9362163	9363492	True	NM_001005191,NM_001079935	chr19,chr19	-,+	OR7D4,OR7E24	-36616,-494
chr5:137696574-137697728	chr5	+	137696713	137697718	True	NM_022809,NM_016604	chr5,chr5	-,+	CDC25C,KDM3B	-29197,-8479
chr7:127882391-127883046	chr7	+	127882468	127883026	True	NM_000230,NM_001166135	chr7,chr7	+,-	LEP,RBM28	-1188,100989
chr10:89274563-89274863	chr10	+	89274759	89274833	True	NM_001178118,NR_024397	chr10,chr10	+,-	MINPP1,LOC728190	-7220,-172444
chr2:79384726-79384951	chr2	+	79384763	79385000	True	NM_002580,NM_138938,NM_138937,NM_002909	chr2,chr2,chr2,chr2	-,-,-,+	REG3A,REG3A,REG3A,REG1A	1931,1930,1931,-37230
chr15:21359443-21359746	chr15	+	21359549	21359793	True	NR_027411,NR_028506	chr15,chr15	+,-	GOLGA8C,NF1P1	-591926,-224924
chr15:21359443-21359746	chr15	+	20352934	20353178	False	NR_036432,NR_027411	chr15,chr15	-,+	HERC2P3,GOLGA8C	358305,414495
chr18:60378785-60379248	chr18	+	60378843	60379042	True	NM_194449,NM_176787	chr18,chr18	+,-	PHLPP1,PIGN	3629,-524554
chr18:48562818-48563247	chr18	+	48562837	48563254	True	NM_005359,NM_016626	chr18,chr18	+,-	SMAD4,MEX3C	-6315,160854
chr7:5324500-5324729	chr7	+	5324523	5324677	True	NM_153247,NM_001040661,NM_001080495	chr7,chr7,chr7	+,+,-	SLC29A4,SLC29A4,TNRC18	-2013,-2013,138550
chr5:150599710-150600000	chr5	+	150599714	150599992	True	NM_000405,NM_015621	chr5,chr5	+,-	GM2A,CCDC69	32620,3712
chr19:1564865-1566104	chr19	+	1564942	1565955	True	NR_026557,NM_203304,NM_001174118	chr19,chr19,chr19	+,-,-	PLK5P,MEX3D,MEX3D	-40915,2152,2152
chr20:30225669-30226015	chr20	+	30225726	30226020	True	NM_032609,NM_001191	chr20,chr20	+,-	COX4I2,BCL2L1	-86,84686
chr20:652659-653542	chr20	+	652694	653552	True	NM_033129,NM_001042353	chr20,chr20	-,+	SCRT2,FAM110A	3321,160803
chr1:226593344-226595300	chr1	+	226593371	226595186	True	NM_001618,NM_001003665	chr1,chr1	-,+	PARP1,C1orf95	673,141314
chr18:7118700-7119598	chr18	+	7118965	7119456	True	NM_005559,NM_001105581	chr18,chr18	-,+	LAMA1,LRRC30	-1152,111680
chr4:30722664-30722876	chr4	+	30722712	30722832	True	NM_002589,NM_000730,NM_032457,NM_001173523,NM_032456	chr4,chr4,chr4,chr4,chr4	+,-,+,+,+	PCDH7,CCKAR,PCDH7,PCDH7,PCDH7	-726,-4230670,-726,-726,-733
chr21:34640854-34642256	chr21	+	34641007	34641734	True	NM_000628,NR_024102	chr21,chr21	+,-	IL10RB,C21orf54	-2387,-98466
chr11:45791749-45792118	chr11	+	45791814	45792041	True	NR_027134,NM_003654	chr11,chr11	+,-	DKFZp779M0652,CHST1	941,-104642
chr7:45039269-45039503	chr7	+	45039343	45039415	True	NR_003697,NR_030770,NM_031443,NM_001167935,NM_001167934	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	C7orf40,CCM2,CCM2,CCM2,CCM2	-13084,-49,371,371,371
chr12:46132395-46133055	chr12	+	46132595	46133115	True	NR_028408,NM_152641	chr12,chr12	-,+	LOC400027,ARID2	-10891,-9026
chr16:3068244-3068783	chr16	+	3068260	3068569	True	NM_001142350,NM_024339,NM_017885,NM_001002017,NM_001002018,NM_021195,NM_020982,NM_016639	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,-,-,-,-,+,+	THOC6,THOC6,HCFC1R1,HCFC1R1,HCFC1R1,CLDN6,CLDN9,TNFRSF12A	5462,5462,5771,5771,5771,-72,-5854,1743
chr2:54952612-54954198	chr2	+	54952726	54954223	True	NM_001039753,NM_007008	chr2,chr2	+,-	EML6,RTN4	-628,283297
chr13:52002753-52003871	chr13	+	52002782	52003612	True	NM_001039937,NM_001101320	chr13,chr13	-,+	INTS6,SERPINE3	23725,-87674
chr14:94490219-94490451	chr14	+	94490229	94490379	True	NM_023112,NM_001202429	chr14,chr14	+,-	OTUB2,ASB2	2344,-47153
chrX:24379362-24380329	chrX	+	24379447	24380318	True	NM_001136233,NM_001136234	chrX,chrX	-,+	FAM48B2,FAM48B1	-48015,559
chr5:71615660-71615966	chr5	+	71615711	71615907	True	NM_015084,NM_024754	chr5,chr5	-,+	MRPS27,PTCD2	227,292
chr11:63683357-63683588	chr11	+	63683391	63683567	True	NM_024771,NM_173587	chr11,chr11	+,-	NAA40,RCOR2	22874,799
chrX:49089353-49090351	chrX	+	49089427	49089941	True	NM_005183,NM_014008	chrX,chrX	-,+	CACNA1F,CCDC22	-58,1985
chr17:14139318-14140732	chr17	+	14139326	14140768	True	NM_001007530,NM_006041	chr17,chr17	-,+	CDRT15,HS3ST3B1	-22,63737
chr17:14139318-14140732	chr17	-	13927206	13927808	False	NR_003261,NM_001007530	chr17,chr17	+,-	CDRT15P,CDRT15	6,212392
chr9:95526130-95526411	chr9	+	95526249	95526423	True	NR_026868,NM_015250,NM_001003800	chr9,chr9,chr9	+,-,-	ANKRD19,BICD2,BICD2	45469,710,710
chr1:47185041-47186083	chr1	+	47185117	47185795	True	NM_014774,NM_001145474	chr1,chr1	-,+	KIAA0494,C1orf223	-381,-47676
chr14:23352947-23353934	chr14	+	23353066	23353932	True	NM_001077351,NM_173527	chr14,chr14	-,+	RBM23,REM2	34514,-685
chr22:39102297-39102586	chr22	+	39102363	39102575	True	NM_014876,NM_004286	chr22,chr22	-,+	JOSD1,GTPBP1	-5904,-607
chr5:157879504-157880570	chr5	+	157879632	157880588	True	NM_014666,NM_173491	chr5,chr5	-,+	CLINT1,LSM11	-593449,-708930
chr7:72423668-72424291	chr7	+	72423690	72424306	True	NR_033323,NR_003602	chr7,chr7	-,+	NSUN5P2,LOC541473	1046,15885
chr7:72423668-72424291	chr7	-	75040600	75041216	False	NR_003614,NR_033322	chr7,chr7	-,+	PMS2L2,NSUN5P1	-52385,-1027
chr2:74694627-74695019	chr2	+	74694633	74694833	True	NM_001146158,NM_006302,NM_012477,NM_053050	chr2,chr2,chr2,chr2	-,-,+,-	MOGS,MOGS,WBP1,MRPL53	-2096,-2096,-9157,5173
chr20:56135388-56135826	chr20	+	56135429	56135811	True	NM_080618,NM_002591	chr20,chr20	-,+	CTCFL,PCK1	-35275,325
chr1:55012009-55013417	chr1	+	55012265	55013342	True	NM_015547,NM_147161,NM_176782	chr1,chr1,chr1	+,+,-	ACOT11,ACOT11,FAM151A	464,464,75915
chr12:6486047-6486376	chr12	+	6486121	6486415	True	NM_001159576,NM_002342,NM_001159575,NM_001038	chr12,chr12,chr12,chr12	-,+,-,-	SCNN1A,LTBR,SCNN1A,SCNN1A	-1731,6941,158,-1216
chr19:40952020-40952399	chr19	+	40952020	40952293	True	NM_013368,NM_020971,NM_203344	chr19,chr19,chr19	-,+,-	SERTAD3,SPTBN4,SERTAD3	-3515,20832,-1738
chr11:125354915-125355697	chr11	+	125354916	125355488	True	NM_005103,NM_001007277	chr11,chr11	-,+	FEZ1,EI24	10768,83809
chr5:727296-729216	chr5	+	727461	728820	True	NM_018140,NM_007030	chr5,chr5	+,-	CEP72,TPPP	-115107,-33951
chr5:727296-729216	chr5	+	811776	812196	False	NM_001166260,NM_024786	chr5,chr5	+,-	TRIP13,ZDHHC11	80772,38958
chr1:27305095-27306277	chr1	+	27305438	27305776	True	NM_152365,NM_001013642	chr1,chr1	-,+	C1orf172,TRNP1	-18537,14418
chr9:136935067-136935480	chr9	+	136935071	136935521	True	NM_007371,NR_015427	chr9,chr9	-,+	BRD3,NCRNA00094	-1930,-44561
chr5:60614199-60615992	chr5	+	60614391	60615981	True	NM_001048249,NM_020928	chr5,chr5	-,+	C5orf43,ZSWIM6	-156089,12118
chr15:35262404-35262771	chr15	+	35262589	35262663	True	NR_003144,NM_014691	chr15,chr15	+,-	LOC723972,AQR	266863,-594
chr11:2892515-2892755	chr11	+	2892547	2892755	True	NR_024627,NM_000076	chr11,chr11	+,-	KCNQ1DN,CDKN1C	-1342,14290
chr11:20410145-20410421	chr11	+	20410144	20410456	True	NM_001029865,NM_005788,NM_001145166,NM_001145167	chr11,chr11,chr11,chr11	-,+,+,+	DBX1,PRMT3,PRMT3,PRMT3	-228274,-1119,-1119,-1119
chr12:6808264-6809254	chr12	+	6808428	6809122	True	NM_001039917,NM_001039919,NM_001135734,NM_001039920,NM_001039918,NM_133476,NM_001164094,NM_153685	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,-,-,-,-,-,+,-	ZNF384,ZNF384,ZNF384,ZNF384,ZNF384,ZNF384,COPS7A,C12orf53	-9759,-9759,-9752,-9759,-9901,-9901,24027,740
chr19:4225649-4226323	chr19	+	4225831	4226177	True	NM_005755,NM_016539	chr19,chr19	+,-	EBI3,SIRT6	3362,-43235
chr17:43323590-43323901	chr17	+	43323612	43323916	True	NR_024434,NM_152343	chr17,chr17	+,-	LOC100133991,C17orf46	1386,15613
chr15:51059322-51060197	chr15	+	51059433	51060227	True	NM_032802,NM_007347	chr15,chr15	-,+	SPPL2A,AP4E1	-1523,140718
chr16:15491144-15491768	chr16	+	15491297	15491795	True	NM_001128423,NR_037466,NM_173803	chr16,chr16,chr16	+,-,+	MPV17L,MIR3180-4,MPV17L	-1737,-242438,-1737
chr3:49466076-49466504	chr3	+	49466250	49466498	True	NR_028435,NM_022171,NM_000481,NM_032316,NM_001164712,NM_001164710,NM_001164711	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-,-	AMT,TCTA,AMT,NICN1,AMT,AMT,AMT	-6139,-16663,-6139,309,-6139,-6139,-6139
chr8:95950932-95952349	chr8	+	95951137	95952365	True	NM_152416,NM_001135733,NM_033285	chr8,chr8,chr8	+,-,-	C8orf38,TP53INP1,TP53INP1	84855,9300,9300
chrX:106242311-106242771	chrX	+	106242401	106242750	True	NM_001085354,NM_020384,NM_024657	chrX,chrX,chrX	-,+,-	MORC4,CLDN2,MORC4	774,-78846,774
chr1:20209330-20210267	chr1	+	20209424	20210319	True	NM_015207,NM_014589	chr1,chr1	+,-	OTUD3,PLA2G2E	-587,39844
chr4:100010058-100011010	chr4	+	100010132	100011053	True	NM_000671,NR_037884	chr4,chr4	-,+	ADH5,LOC100507053	-201,-182
chr16:6069132-6069536	chr16	+	6069162	6069394	True	NM_018723,NM_001142333,NM_201598	chr16,chr16,chr16	+,+,-	RBFOX1,RBFOX1,FAM86A	-82,-82,-921373
chr8:56988253-56988912	chr8	+	56988398	56988552	True	NM_001011667,NM_001146227,NR_002437,NM_001023	chr8,chr8,chr8,chr8	+,-,-,-	CHCHD7,RPS20,SNORD54,RPS20	135762,-1258,-1938,-1258
chr22:24381961-24383168	chr22	+	24382086	24382910	True	NM_001144931,NM_000853	chr22,chr22	+,-	LOC391322,GSTT1	-9020,1424
chr12:53774436-53774826	chr12	+	53774599	53774677	True	NM_138473,NM_001173467,NM_003109	chr12,chr12,chr12	+,-,+	SP1,SP7,SP1	-671,-44595,-222
chr7:100427171-100427572	chr7	+	100427311	100427373	True	NM_020246,NM_004444	chr7,chr7	+,-	SLC12A9,EPHB4	22984,-2168
chr6:4771506-4772381	chr6	+	4771648	4772418	True	NM_006638,NM_004824	chr6,chr6	-,+	RPP40,CDYL	231903,4261
chr19:14141532-14142502	chr19	+	14141725	14142360	True	NM_004843,NM_002918,NM_080864	chr19,chr19,chr19	+,-,+	IL27RA,RFX1,RLN3	46,-24591,-2759
chr19:15378473-15379274	chr19	+	15378587	15379239	True	NM_033025,NM_058243	chr19,chr19	+,-	SYDE1,BRD4	-160424,12073
chr9:14314553-14314769	chr9	+	14314614	14314794	True	NM_005596,NR_003920,NM_001190737	chr9,chr9,chr9	-,+,-	NFIB,LOC389705,NFIB	-569,678530,-569
chr8:144697520-144697781	chr8	+	144697553	144697823	True	NM_003313,NM_032862,NM_023078	chr8,chr8,chr8	-,+,-	TSTA3,TIGD5,PYCRL	1959,-17530,-5769
chr3:179282955-179283737	chr3	+	179283332	179283770	True	NM_177989,NM_020409,NM_004301,NM_178042	chr3,chr3,chr3,chr3	+,-,+,+	ACTL6A,MRPL47,ACTL6A,ACTL6A	-2677,38714,-2677,-2677
chr6:34662682-34663540	chr6	+	34662850	34663578	True	NM_022758,NM_024294,NM_003093	chr6,chr6,chr6	-,-,+	C6orf106,C6orf106,SNRPC	1097,1097,61292
chr13:50264999-50265223	chr13	+	50265043	50265207	True	NM_032565,NM_138450	chr13,chr13	-,+	EBPL,ARL11	466,-62667
chr7:140371187-140371480	chr7	+	140371187	140371435	True	NR_024454,NM_052853	chr7,chr7	-,+	LOC100134713,ADCK2	25506,1517
chr16:74699735-74700370	chr16	+	74699873	74700343	True	NM_018124,NM_032268	chr16,chr16	-,+	RFWD3,ZNRF1	486,332571
chr6:1388619-1389271	chr6	+	1388655	1389320	True	NM_001452,NR_027116	chr6,chr6	+,-	FOXF2,LOC285768	748,-287088
chr7:152141641-152142636	chr7	+	152142064	152142442	True	NR_002935,NM_170606	chr7,chr7	+,-	FABP5P3,MLL3	-8140,-8974
chr11:117800865-117802533	chr11	+	117801100	117802426	True	NM_001558,NM_001077263	chr11,chr11	+,-	IL10RA,TMPRSS13	54679,-985
chr9:36573797-36574302	chr9	+	36573809	36574312	True	NM_014791,NM_194330	chr9,chr9	+,-	MELK,RNF38	-955,-172614
chr19:56160550-56160778	chr19	+	56160560	56160826	True	NM_007279,NM_016535,NM_016202,NM_013301,NM_001163423,NM_203374,NM_207115,NM_001012478	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,-,+,+	U2AF2,ZNF581,ZNF580,CCDC106,ZNF580,ZNF784,ZNF580,U2AF2	4589,-5625,-7193,-1657,-7148,-24619,-8219,4589
chr14:31838588-31839062	chr14	+	31838689	31838749	True	NM_025152,NM_015473	chr14,chr14	+,-	NUBPL,HEATR5A	191841,51089
chr9:140118381-140118736	chr9	+	140118508	140118582	True	NM_001190228,NM_080877,NM_001177316,NM_001177317,NM_031297,NM_199001	chr9,chr9,chr9,chr9,chr9,chr9	+,+,+,+,-,+	LOC643596,SLC34A3,SLC34A3,SLC34A3,RNF208,C9orf169	3435,6802,6626,6626,-2733,1061
chr19:7658582-7658985	chr19	+	7658720	7658890	True	NM_020196,NM_020902,NM_001080429	chr19,chr19,chr19	-,+,+	XAB2,KIAA1543,KIAA1543	35599,1897,1897
chr4:71003099-71004954	chr4	+	71003158	71004746	True	NR_033311,NM_001891	chr4,chr4	+,-	CSN1S2BP,CSN2	-3894,-176432
chr12:51353196-51353589	chr12	+	51353308	51353388	True	NM_001109619,NM_001174130	chr12,chr12	+,-	HIGD1C,SLC11A2	-5583,49721
chr1:51985174-51986651	chr1	+	51985186	51986676	True	NM_001981,NM_024586	chr1,chr1	-,+	EPS15,OSBPL9	-191,95869
chr9:127616623-127617135	chr9	+	127616627	127616866	True	NM_007209,NM_001045476	chr9,chr9	-,+	RPL35,WDR38	7431,-923
chr3:15532477-15533177	chr3	+	15532480	15533221	True	NM_033083,NM_080538,NR_036232	chr3,chr3,chr3	+,-,-	EAF1,COLQ,MIR4270	-63467,7217,4653
chr12:123835475-123836517	chr12	+	123835695	123836518	True	NM_018183,NM_020382,NM_001167856	chr12,chr12,chr12	-,+,-	SBNO1,SETD8,SBNO1	-707,32185,-707
chr19:37668022-37669331	chr19	+	37668028	37669348	True	NM_152655,NM_152604,NM_199126	chr19,chr19,chr19	-,+,-	ZNF585A,ZNF383,ZNF585A	-4413,48017,-4695
chr10:88282043-88282812	chr10	+	88282259	88282824	True	NM_015045,NM_001030015	chr10,chr10	-,+	WAPAL,OPN4	-718,131489
chrX:110653560-110654434	chrX	+	110653566	110654298	True	NM_000555,NR_033974,NM_001195553,NM_178151,NM_178153,NM_178152	chrX,chrX,chrX,chrX,chrX,chrX	-,+,-,-,-,-	DCX,DKFZp686D0853,DCX,DCX,DCX,DCX	126,100591,1212,1171,1212,1212
chr1:231166020-231167742	chr1	+	231166071	231167677	True	NM_198552,NM_022786	chr1,chr1	-,+	FAM89A,ARV1	8382,-51299
chr1:224800889-224801739	chr1	+	224801053	224801413	True	NM_152495,NM_025160	chr1,chr1	+,-	CNIH3,WDR26	2765,-179052
chr7:6521923-6522183	chr7	+	6521943	6522215	True	NM_006854,NM_001134387,NM_001100603	chr7,chr7,chr7	-,+,-	KDELR2,ZDHHC4,KDELR2	1684,94849,1684
chr12:15113648-15114172	chr12	+	15113755	15114118	True	NM_001175,NM_006205	chr12,chr12	-,+	ARHGDIB,PDE6H	495,11837
chr20:35235839-35237125	chr20	+	35236122	35236654	True	NM_199483,NM_001199534,NM_032214,NM_018840,NR_026562	chr20,chr20,chr20,chr20,chr20	+,+,-,+,+	C20orf24,C20orf24,SLA2,C20orf24,C20orf24	-2036,-2036,37958,-2036,-2036
chr3:39853498-39854761	chr3	+	39853506	39854589	True	NR_033965,NM_015460	chr3,chr3	-,+	FLJ33065,MYRIP	496650,-2262
chr22:38507865-38508086	chr22	+	38507936	38508084	True	NM_012407,NM_025045	chr22,chr22	+,-	PICK1,BAIAP2L2	-54725,-1260
chr20:2631627-2632777	chr20	+	2631877	2632716	True	NR_004399,NR_002981,NR_027700,NR_003078,NM_006899,NM_006392,NR_031699,NR_002739,NR_002738	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,+,+,+,-,+,+,+,+	SNORD86,SNORA51,NOP56,SNORD110,IDH3B,NOP56,MIR1292,SNORD56,SNORD57	4026,2996,537,2141,12178,537,706,4553,4868
chr16:2037069-2037857	chr16	+	2037167	2037752	True	NM_144603,NM_172168,NM_004209,NM_172167,NM_005262	chr16,chr16,chr16,chr16,chr16	-,-,+,-,+	NOXO1,NOXO1,SYNGR3,NOXO1,GFER	-5727,-5983,2193,-5983,-3068
chr7:6629865-6630130	chr7	+	6629908	6630108	True	NM_024067,NM_001145118	chr7,chr7	+,-	C7orf26,GRID2IP	-44,-38841
chr4:166322449-166323536	chr4	+	166322493	166323556	True	NR_030304,NR_026575	chr4,chr4	+,-	MIR578,GK3P	-15163,-121318
chr3:195871258-195871993	chr3	+	195871326	195871854	True	NR_034088,NM_001128148	chr3,chr3	+,-	LOC401109,TFRC	-1870,-62294
chr5:175110862-175111125	chr5	+	175110866	175111144	True	NM_022304,NM_000794	chr5,chr5	+,-	HRH2,DRD1	-2453,-239703
chr15:65338357-65339105	chr15	+	65338815	65338903	True	NM_178859,NM_139242	chr15,chr15	+,-	OSTBETA,MTFMT	-1159,-16838
chr14:65411979-65412529	chr14	+	65411982	65412554	True	NM_001202559,NM_002083	chr14,chr14	+,-	CHURC1-FNTB,GPX2	-30959,-2451
chr1:165600938-165601499	chr1	+	165600951	165601430	True	NM_004528,NR_026744	chr1,chr1	+,-	MGST3,LOC400794	-552,-49610
chr10:6243885-6244159	chr10	+	6243932	6244120	True	NM_004566,NM_000417	chr10,chr10	+,-	PFKFB3,IL2RA	719,-139599
chr4:42925857-42927539	chr4	+	42926023	42927359	True	NM_001080476,NM_006095	chr4,chr4	+,-	GRXCR1,ATP8A1	-30798,-266901
chr10:76860364-76861954	chr10	+	76860502	76861726	True	NM_001007271,NM_001007273,NM_001007272,NM_016364,NM_144660,NM_001174156	chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,+,+	DUSP13,DUSP13,DUSP13,DUSP13,SAMD8,SAMD8	7294,7294,7294,-1254,9666,9666
chr1:145730621-145731073	chr1	+	145730661	145730895	True	NM_002614,NM_001201326,NM_001201325,NM_007053	chr1,chr1,chr1,chr1	+,+,+,-	PDZK1,PDZK1,PDZK1,CD160	-3046,-3046,-3046,-15096
chr1:894343-894557	chr1	+	894353	894435	True	NM_015658,NM_198317,NM_001160184,NM_032129	chr1,chr1,chr1,chr1	-,+,+,+	NOC2L,KLHL17,PLEKHN1,PLEKHN1	294,1531,7441,7441
chr15:29210048-29210442	chr15	+	29210249	29210459	True	NM_001130414,NM_138704,NM_005503	chr15,chr15,chr15	+,-,+	APBA2,NDNL2,APBA2	3380,351608,3380
chr12:105725462-105725765	chr12	+	105725498	105725666	True	NM_018171,NM_001145199	chr12,chr12	-,+	APPL2,C12orf75	-95490,-1135
chr17:7185673-7185986	chr17	+	7185783	7186029	True	NM_001042,NM_015982	chr17,chr17	+,-	SLC2A4,YBX2	-780,11897
chr2:124784058-124784476	chr2	+	124784086	124784440	True	NM_032390,NM_130773	chr2,chr2	-,+	MKI67IP,CNTNAP5	-2289583,-1280
chr17:76219904-76220953	chr17	+	76219942	76220983	True	NR_002219,NM_001168,NM_001012271,NM_001012270,NM_001204210,NM_001204211,NM_001204212	chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,+,+,+,+,+	EPR1,BIRC5,BIRC5,BIRC5,TMEM235,TMEM235,TMEM235	-24,-9716,-9716,-9716,6407,6407,6407
chr3:169483023-169483604	chr3	+	169483024	169483478	True	NR_001566,NM_001185118,NR_033703,NR_033702,NM_018657,NM_032487,NM_001185119	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,+,+,+,-,+	TERC,MYNN,MYNN,MYNN,MYNN,ARPM1,MYNN	-176,7374,7374,7374,7374,4264,8574
chr1:45306021-45306697	chr1	+	45306060	45306374	True	NM_003738,NM_001166292,NM_001136537	chr1,chr1,chr1	-,-,+	PTCH2,PTCH2,BTBD19	2292,2292,-31957
chr3:169755267-169755543	chr3	+	169755408	169755476	True	NM_014373,NR_024409	chr3,chr3	+,-	GPR160,LOC100128164	258,-70886
chr12:12883469-12883929	chr12	+	12883660	12883768	True	NM_001130415,NM_006143	chr12,chr12	+,-	APOLD1,GPR19	-4871,-34539
chr7:44786123-44787845	chr7	+	44786167	44787748	True	NM_174929,NM_031449,NM_138635	chr7,chr7,chr7	+,+,-	ZMIZ2,ZMIZ2,H2AFV	8038,781,100027
chr2:27482514-27483098	chr2	+	27482683	27483135	True	NM_173650,NM_003459	chr2,chr2	+,-	DNAJC5G,SLC30A3	15153,2875
chr21:47574883-47575285	chr21	+	47574905	47575311	True	NM_001849,NM_006657,NM_206965	chr21,chr21,chr21	+,-,-	COL6A2,FTCD,FTCD	-56923,220,220
chr16:48710543-48712129	chr16	+	48710885	48712167	True	NM_153029,NM_031490	chr16,chr16	-,+	N4BP1,LONP2	-66765,-432725
chr2:187454412-187454701	chr2	+	187454422	187454644	True	NM_002210,NM_001145000,NM_182521	chr2,chr2,chr2	+,+,-	ITGAV,ITGAV,ZSWIM2	145,145,259303
chr22:35625860-35627332	chr22	+	35625929	35627321	True	NM_001003681,NM_005368	chr22,chr22	+,-	HMGXB4,MB	26123,386113
chr4:138449227-138450002	chr4	+	138449287	138450038	True	NM_012118,NM_019035	chr4,chr4	+,-	CCRN4L,PCDH18	1486904,3641
chr19:37958860-37959079	chr19	+	37958859	37958959	True	NM_144694,NM_152484	chr19,chr19	+,-	ZNF570,ZNF569	1022,-520
chr1:55505995-55506426	chr1	+	55506124	55506340	True	NM_014762,NM_174936	chr1,chr1	-,+	DHCR24,PCSK9	-153203,-1026
chr12:48508234-48509011	chr12	+	48508364	48509046	True	NM_000289,NM_001166686,NM_001166688,NM_014554,NM_001166687	chr12,chr12,chr12,chr12,chr12	+,+,+,-,+	PFKM,PFKM,PFKM,SENP1,PFKM	3966,-8759,7383,-8723,7383
chr20:32317418-32317796	chr20	+	32317550	32317612	True	NM_032819,NM_007238,NM_183397	chr20,chr20,chr20	+,-,-	ZNF341,PXMP4,PXMP4	2195,-9414,-9414
chr7:152138925-152140282	chr7	+	152139405	152140049	True	NR_002935,NM_170606	chr7,chr7	+,-	FABP5P3,MLL3	-5476,-6315
chr12:101802043-101802312	chr12	+	101802125	101802320	True	NM_152323,NM_001177	chr12,chr12	+,-	SPIC,ARL1	69014,-553
chr16:57023852-57024596	chr16	+	57023905	57024507	True	NM_024946,NM_032206	chr16,chr16	-,+	FAM192A,NLRC5	195519,-549
chr4:3532726-3533291	chr4	+	3533080	3533255	True	NM_002337,NM_173660	chr4,chr4	-,+	LRPAP1,DOK7	1026,-68110
chr1:156217185-156218089	chr1	+	156217315	156218047	True	NM_024897,NM_199173,NM_198406	chr1,chr1,chr1	-,+,-	PAQR6,BGLAP,PAQR6	116,-5415,65
chrX:16735683-16736742	chrX	+	16735715	16736368	True	NM_032796,NM_019857,NM_175859,NR_033181,NM_001144002	chrX,chrX,chrX,chrX,chrX	+,-,-,+,-	SYAP1,CTPS2,CTPS2,SYAP1,CTPS2	1338,-4656,-4940,1338,-5375
chr15:99193742-99194157	chr15	+	99193863	99194083	True	NM_182562,NM_000875	chr15,chr15	-,+	FAM169B,IGF1R	-136252,-1153
chr2:204196623-204197069	chr2	+	204196853	204197078	True	NM_213589,NM_005759	chr2,chr2	-,+	RAPH1,ABI2	203031,-3905
chr19:35820254-35820509	chr19	+	35820298	35820486	True	NM_152481,NM_001771,NM_001185099,NM_001185100,NM_001185101	chr19,chr19,chr19,chr19,chr19	-,+,+,+,+	FAM187B,CD22,CD22,CD22,CD22	-100670,-277,-277,-277,-277
chr12:133004405-133004826	chr12	+	133004443	133004741	True	NM_001142641,NM_001122636	chr12,chr12	+,-	FBRSL1,GALNT9	62415,-98538
chr19:39935077-39935602	chr19	+	39935497	39935582	True	NM_001111020,NM_003169,NM_001130825,NM_001130824,NM_001020	chr19,chr19,chr19,chr19,chr19	+,+,+,+,-	SUPT5H,SUPT5H,SUPT5H,SUPT5H,RPS16	603,705,603,603,-8879
chr10:126716731-126717198	chr10	+	126716763	126717139	True	NM_022802,NM_017580,NR_036178	chr10,chr10,chr10	-,+,-	CTBP2,ZRANB1,MIR4296	-310,-86122,4350
chr6:17399048-17399587	chr6	+	17399082	17399224	True	NM_006366,NM_005124	chr6,chr6	+,-	CAP2,NUP153	-5404,307644
chr7:6684967-6685237	chr7	+	6684978	6685045	True	NM_017560,NM_006956	chr7,chr7	+,-	ZNF853,ZNF12	-29510,61572
chr12:112846573-112846977	chr12	+	112846593	112846941	True	NM_002834,NM_000970,NM_001024662	chr12,chr12,chr12	+,-,-	PTPN11,RPL6,RPL6	9594,552,552
chr17:72773975-72775355	chr17	+	72774214	72775259	True	NM_015654,NM_017728	chr17,chr17	-,+	NAT9,TMEM104	-1744,-1645
chr19:8809119-8809489	chr19	+	8809324	8809444	True	NM_178525,NM_001004699	chr19,chr19	-,+	ACTL9,OR2Z1	-152,31946
chr2:107069998-107071546	chr2	+	107070205	107070273	True	NM_001144013,NR_003506	chr2,chr2	-,+	RGPD3,PLGLA	14586,-67487
chr2:107069998-107071546	chr2	-	108458573	108458641	False	NM_182588,NR_024439	chr2,chr2	+,-	RGPD4,LOC729121	-15244,-15990
chr9:91792047-91792462	chr9	+	91792051	91792389	True	NM_016848,NM_001827	chr9,chr9	-,+	SHC3,CKS2	1343,133723
chr16:56667269-56667619	chr16	+	56667477	56667569	True	NM_005946,NM_175617,NR_036677,NM_176870,NM_005950	chr16,chr16,chr16,chr16,chr16	+,+,+,+,-	MT1A,MT1E,MT1JP,MT1M,MT1G	5008,-7943,2081,-994,34458
chrX:40794760-40794984	chr12	-	118683993	118684043	True	NM_002567,NM_016281	chr12,chr12	+,-	PEBP1,TAOK3	-110174,126757
chr4:25914208-25915107	chr4	+	25914356	25914843	True	NM_001145432,NM_015187	chr4,chr4	+,-	C4orf52,SEL1L3	970,-49746
chr11:73356543-73357340	chr11	+	73356547	73357217	True	NM_001130036,NM_001130034,NM_001130035,NM_001130033,NM_021200,NM_015159	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,-	PLEKHB1,PLEKHB1,PLEKHB1,PLEKHB1,PLEKHB1,FAM168A	2517,1376,1376,5,5,-47319
chr17:38075778-38076582	chr17	+	38075798	38076573	True	NM_139280,NM_001042471,NM_018530,NM_001165959,NM_001165958,NM_001195545	chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,+	ORMDL3,GSDMB,GSDMB,GSDMB,GSDMB,LOC100505591	7361,-895,-2005,-895,-895,21153
chr9:35669549-35670944	chr9	+	35669563	35670731	True	NM_032818,NM_001216	chr9,chr9	-,+	C9orf100,CA9	-4285,3183
chr1:12855294-12855841	chr1	+	12855491	12855849	True	NM_023013,NM_001146344	chr1,chr1	+,-	PRAMEF1,PRAMEF11	-3997,35465
chr1:12855294-12855841	chr1	-	13448522	13448703	False	NM_001099854,NM_001024661,NM_001010890	chr1,chr1,chr1	-,-,+	PRAMEF14,PRAMEF13,PRAMEF9	4004,4004,-27404
chr1:12855294-12855841	chr1	-	13669377	13669558	False	NM_001099854,NM_001010890	chr1,chr1	-,+	PRAMEF14,PRAMEF9	4004,-27462
chr9:70346068-70346504	chr9	+	70346330	70346380	True	NM_201453,NM_001099279	chr9,chr9	+,-	CBWD3,FOXD4L2	510458,83401
chr9:70346068-70346504	chr9	-	42800241	42800291	False	NR_026759,NR_026558	chr9,chr9	-,+	FAM95B1,AQP7P3	233071,57860
chr1:23569371-23570484	chr1	+	23569389	23570352	True	NR_033690,NM_000864	chr1,chr1	+,-	C1orf213,HTR1D	125111,-48167
chrX:48644636-48646242	chrX	+	48644739	48646070	True	NM_002049,NM_013271	chrX,chrX	+,-	GATA1,PCSK1N	192,47940
chr11:1716743-1718509	chr11	+	1716746	1718392	True	NR_026642,NM_001012416	chr11,chr11	-,+	FAM99B,KRTAP5-6	-9887,32
chr13:95249350-95249597	chr13	+	95249444	95249536	True	NM_014305,NM_180989	chr13,chr13	-,+	TGDS,GPR180	-933,4567
chr19:21207440-21209036	chr19	+	21207676	21208807	True	NM_001172671,NM_025189,NM_021269	chr19,chr19,chr19	+,+,-	ZNF430,ZNF430,ZNF708	-4308,-4308,303462
chr8:97171330-97171615	chr8	+	97171341	97171629	True	NM_001001557,NM_014754	chr8,chr8	-,+	GDF6,PTDSS1	1441,102537
chr15:27017652-27017904	chr15	+	27017829	27017921	True	NM_000814,NM_000810,NM_021912	chr15,chr15,chr15	-,+,-	GABRB3,GABRA5,GABRB3	352,93944,1064
chr14:95265900-95266456	chr14	+	95265914	95266432	True	NR_015340,NM_173849	chr14,chr14	+,-	SERPINA13,GSC	-158912,-29415
chr19:12861539-12862634	chr19	+	12861572	12862536	True	NM_024038,NM_017682	chr19,chr19	-,+	C19orf43,BEST2	-16043,870
chr22:28198560-28199336	chr22	+	28198573	28199258	True	NM_002430,NR_026962	chr22,chr22	-,+	MN1,TTC28-AS1	-1087,116105
chr2:166876713-166877178	chr2	+	166876713	166877037	True	NM_024969,NM_001165963	chr2,chr2	+,-	CSRNP3,SCN1A	-447921,53176
chr2:16849651-16850780	chr2	+	16849779	16850772	True	NM_005378,NM_030797	chr2,chr2	+,-	MYCN,FAM49A	-769147,-2645
chr6:76311557-76311795	chr6	+	76311655	76311843	True	NM_015687,NM_015571,NM_001100409	chr6,chr6,chr6	-,+,+	FILIP1,SENP6,SENP6	-108159,-84,-84
chr17:45120837-45122446	chr17	+	45121102	45122453	True	NM_203400,NM_054022	chr17,chr17	-,+	RPRML,GOSR2	-64488,-120672
chr17:45120837-45122446	chr17	-	43601497	43601562	False	NR_002940,NR_037772	chr17,chr17	-,+	LRRC37A4,CRHR1	-3608,96147
chr9:139258263-139258596	chr9	+	139258382	139258586	True	NM_052813,NM_001200003,NM_001080849,NM_052814	chr9,chr9,chr9,chr9	-,+,-,-	CARD9,GPSM1,DNLZ,CARD9	9597,-9181,-141,9597
chr17:21114929-21116861	chr17	+	21114970	21116836	True	NM_003876,NM_145109,NR_024547	chr17,chr17,chr17	-,+,-	TMEM11,MAP2K3,TMEM11	1122,71131,1122
chr2:185490962-185492761	chr2	+	185490982	185492575	True	NM_194250,NM_205842	chr2,chr2	+,-	ZNF804A,NCKAP1	-27952,-1587753
chr11:62108964-62109569	chr11	+	62108993	62109611	True	NM_001083926,NM_206998,NM_025080	chr11,chr11,chr11	+,-,+	ASRGL1,SCGB1D4,ASRGL1	-4277,-42457,-4277
chr9:77503700-77504079	chr9	+	77503778	77503882	True	NM_012383,NM_001177310,NM_001177311,NM_017662	chr9,chr9,chr9,chr9	+,-,-,-	OSTF1,TRPM6,TRPM6,TRPM6	199515,-1142,-1515,-768
chr16:31192893-31193402	chr16	+	31192976	31193280	True	NM_004960,NM_001170937,NM_013258,NM_001170634,NR_028388	chr16,chr16,chr16,chr16,chr16	+,+,-,+,+	FUS,FUS,PYCARD,FUS,FUS	-1596,-1596,20867,-1596,-1596
chr13:25671265-25672212	chr13	+	25671284	25672149	True	NM_152704,NM_030979	chr13,chr13	-,+	FAM123A,PABPC3	73759,-1060
chrX:40131556-40132237	chrX	+	40131620	40132237	True	NM_001123384,NM_005765	chrX,chrX	-,+	BCOR,ATP6AP2	-95038,307978
chr14:25044598-25045605	chr14	+	25044631	25045647	True	NM_015299,NM_001911	chr14,chr14	+,-	KHNYN,CTSG	-145541,-131
chr11:74950094-74951133	chr11	+	74950233	74950705	True	NM_001195528,NR_029891	chr11,chr11	+,-	LOC441617,MIR326	1244,95575
chr12:30847744-30848342	chr12	+	30847804	30848322	True	NM_006390,NM_001080509	chr12,chr12	-,+	IPO8,TSPAN11	657,231515
chr10:131933830-131934355	chr10	+	131933836	131934378	True	NM_006541,NM_001199868,NR_034125	chr10,chr10,chr10	+,+,-	GLRX3,GLRX3,LOC387723	260,260,-24755
chr1:205473292-205473545	chr1	+	205473335	205473577	True	NM_212503,NM_002596,NR_027086,NM_212502	chr1,chr1,chr1,chr1	+,+,-,+	CDK18,CDK18,LOC284578,CDK18	106,106,52236,106
chr9:130477450-130477754	chr9	+	130477658	130477792	True	NM_001002913,NM_144965,NM_001012502	chr9,chr9,chr9	-,+,+	PTRH1,TTC16,C9orf117	194,565,-8438
chr2:231060330-231061771	chr2	+	231060385	231061075	True	NM_004509,NM_001005176	chr2,chr2	-,+	SP110,SP140	23812,29369
chr2:288911-289259	chr2	+	289108	289268	True	NR_024080,NM_001002919	chr2,chr2	+,-	ACP1,FAM150B	-24291,-800
chr6:78425597-78426773	chr6	+	78425804	78426638	True	NM_000863,NM_001010844	chr6,chr6	-,+	HTR1B,IRAK1BP1	-252684,1150550
chr11:61521846-61522716	chr11	+	61521933	61522589	True	NR_026882,NM_013279,NM_001127392	chr11,chr11,chr11	-,+,+	DKFZP434K028,C11orf9,C11orf9	2597,271,-1863
chr17:27892504-27892864	chr17	+	27892694	27892912	True	NM_138349,NM_198147	chr17,chr17	+,-	TP53I13,ABHD15	2826,1180
chr17:79359412-79359709	chr17	+	79359585	79359679	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	13860,-55111
chr2:191179363-191179764	chr2	+	191179494	191179668	True	NM_001128928,NM_014362,NM_198047	chr2,chr2,chr2	+,-,-	INPP1,HIBCH,HIBCH	28527,5153,5153
chr4:49620687-49621352	chr4	+	49620841	49621385	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-632627,-712026
chr8:25319862-25321254	chr8	+	25320472	25321279	True	NM_017634,NM_152562	chr8,chr8	-,+	KCTD9,CDCA2	-4488,-4010
chr7:19184969-19185265	chr7	+	19185107	19185223	True	NM_152898,NM_001204148	chr7,chr7	-,+	FERD3L,HDAC9	-63,-636265
chr19:1653262-1653613	chr19	+	1653291	1653417	True	NM_001136139,NM_003200,NM_001080488	chr19,chr19,chr19	-,-,+	TCF3,TCF3,ONECUT3	-3005,-965,100244
chr17:3866165-3866719	chr17	+	3866210	3866757	True	NM_174958,NM_144611,NM_174953,NM_174955,NM_174954,NM_174957,NM_174956,NM_005173	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,+,-,-,-,-,-,-	ATP2A3,CYB5D2,ATP2A3,ATP2A3,ATP2A3,ATP2A3,ATP2A3,ATP2A3	1029,179704,1029,1029,1029,1029,1029,1029
chr19:12599260-12599678	chr19	+	12599403	12599473	True	NM_152601,NM_153358	chr19,chr19	-,+	ZNF709,ZNF791	-3771,122258
chr22:45065310-45065771	chr22	+	45065314	45065734	True	NM_032287,NM_001198721,NM_001017528,NM_001017529,NM_001017530,NM_015366	chr22,chr22,chr22,chr22,chr22,chr22	-,+,+,+,+,+	LDOC1L,PRR5,PRR5,PRR5,PRR5,PRR5	-171309,6953,-938,-938,6953,6953
chr7:150974311-150974619	chr7	+	150974392	150974618	True	NM_001003802,NR_030407,NM_003078	chr7,chr7,chr7	-,+,-	SMARCD3,MIR671,SMARCD3	-572,-38936,-161
chr4:57346584-57348327	chr4	+	57346763	57347828	True	NM_002703,NM_006947	chr4,chr4	-,+	PPAT,SRP72	-44961,-13065
chr12:49409445-49409843	chr12	+	49409635	49409697	True	NM_002733,NM_212461,NM_005430	chr12,chr12,chr12	-,-,+	PRKAG1,PRKAG1,WNT1	2945,2945,-37450
chr2:46925698-46926047	chr2	+	46925700	46925930	True	NM_144949,NM_173074,NM_014011	chr2,chr2,chr2	+,-,+	SOCS5,PIGF,SOCS5	418,-81449,168
chr3:191033095-191034005	chr3	+	191033210	191034018	True	NM_198152,NM_174908	chr3,chr3	-,+	UTS2D,CCDC50	14357,12855
chr18:75690239-75691995	chr18	+	75690342	75691804	True	NM_001480,NM_001025100	chr18,chr18	+,-	GALR1,MBP	-728387,-845568
chr16:833270-833868	chr16	+	833346	833892	True	NM_001025190,NM_058192,NM_022092	chr16,chr16,chr16	-,-,+	MSLNL,RPUSD1,CHTF18	-420,4541,4729
chr17:43685918-43687540	chr17_ctg5_hap1	+	552634	552692	False	NM_001193465,NR_034172	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	KIAA1267,LOC644246	10805,42752
chr17:43685918-43687540	chr17_ctg5_hap1	-	1401285	1401343	False	NR_002940,NM_016632	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LRRC37A4,ARL17A	80033,112599
chr17:43685918-43687540	chr17_ctg5_hap1	-	1181140	1181471	False	NR_026901,NR_037772	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LOC644172,CRHR1	6967,-10687
chr17:43685918-43687540	chr17	+	43686398	43687035	True	NR_026901,NR_037772	chr17,chr17	-,+	LOC644172,CRHR1	-6650,10674
chr1:225158278-225160213	chr1	+	225158840	225159756	True	NM_144989,NM_002296	chr1,chr1	+,-	DNAH14,LBR	-41540,456116
chr16:22021234-22021959	chr16	+	22021640	22021964	True	NM_173806,NR_033694,NM_001164579	chr16,chr16,chr16	-,-,+	PDZD9,PDZD9,C16orf52	-9209,-9209,-2240
chr9:115484108-115485062	chr9	+	115484468	115484916	True	NM_001012994,NM_021218	chr9,chr9	+,-	SNX30,C9orf80	28217,-4081
chr3:129926840-129928671	chr3	+	129927899	129927972	True	NR_027898,NR_024252	chr3,chr3	+,-	COL6A4P2,LOC729375	3690,-97623
chr1:11329313-11330399	chr1	+	11329419	11330257	True	NM_004958,NM_013319	chr1,chr1	-,+	MTOR,UBIAD1	-6811,2997
chr2:42991868-42992175	chr2	+	42991946	42992130	True	NM_148962,NM_020744	chr2,chr2	-,+	OXER1,MTA3	-545,-196326
chr6:13329093-13329904	chr6	+	13329222	13329859	True	NM_001143966,NM_001143964,NM_001143965,NM_016495,NM_031244	chr6,chr6,chr6,chr6,chr6	-,-,-,-,+	TBC1D7,TBC1D7,TBC1D7,TBC1D7,SIRT5	-435,-435,-435,-435,244932
chr17:30453964-30454598	chr17	+	30454085	30454547	True	NM_001033566,NR_002222	chr17,chr17	+,-	RHOT1,ARGFXP2	14925,24093
chr11:102947851-102948821	chr11	+	102947976	102948822	True	NM_001080463,NM_032299	chr11,chr11	+,-	DYNC2H1,DCUN1D5	31337,14172
chr6:66011540-66013004	chr6	+	66011617	66013029	True	NR_026540,NM_198283	chr6,chr6	+,-	MCART3P,EYS	484742,276720
chr6:66011540-66013004	chr1	+	203798968	203799020	False	NM_003094,NR_027902	chr1,chr1	+,-	SNRPE,C1orf157	31719,211424
chr6:66011540-66013004	chr1	-	219784789	219786072	False	NM_138794,NM_018713	chr1,chr1	+,-	LYPLAL1,SLC30A10	-437650,315971
chr2:190032958-190034527	chr2	+	190032982	190033981	True	NM_000393,NR_037401	chr2,chr2	-,+	COL5A2,MIR3606	10687,-172677
chr1:179335311-179335596	chr1	+	179335429	179335620	True	NM_001136001,NM_144696	chr1,chr1	-,+	ABL2,AXDND1	-136610,-629
chr16:30966326-30966649	chr16	+	30966367	30966507	True	NM_014712,NM_152288,NR_024348	chr16,chr16,chr16	+,+,-	SETD1A,ORAI3,FBXL19-AS1	2107,-6013,-31777
chr3:38205930-38206203	chr3	+	38205944	38206110	True	NM_005109,NR_024024	chr3,chr3	+,-	OXSR1,ACAA1	915,-27211
chr8:22439317-22439829	chr8	+	22439430	22439866	True	NR_027715,NM_198042,NM_176871,NM_021630	chr8,chr8,chr8,chr8	-,+,+,+	FLJ14107,PDLIM2,PDLIM2,PDLIM2	59906,-1494,-1494,-3227
chr6:28185724-28186085	chr6	+	28185753	28186079	True	NR_002936,NM_001199479,NM_006299,NM_001199480	chr6,chr6,chr6,chr6	-,+,+,+	LOC222699,ZNF193,ZNF193,ZNF193	678,6949,6949,6949
chr11:67169970-67171013	chr11	+	67170192	67170593	True	NM_198517,NM_002708,NM_001008709,NM_206873	chr11,chr11,chr11,chr11	+,-,-,-	TBC1D10C,PPP1CA,PPP1CA,PPP1CA	818,-816,-816,-816
chr18:29171031-29172862	chr18	+	29171154	29172871	True	NM_004775,NM_000371	chr18,chr18	-,+	B4GALT6,TTR	91865,17
chr10:32347061-32347867	chr10	+	32347320	32347830	True	NM_004521,NM_001026383	chr10,chr10	-,+	KIF5B,CCDC7	-1949,387210
chr1:63833435-63833676	chr1	+	63833436	63833632	True	NM_014288,NM_013339	chr1,chr1	-,+	ITGB3BP,ALG6	155253,-226
chr13:107220492-107220744	chr13	+	107220551	107220769	True	NM_018011,NR_034119	chr13,chr13	-,+	ARGLU1,LOC728192	-37,-191691
chr3:138824410-138825363	chr3	+	138824432	138825278	True	NM_001134657,NR_026783	chr3,chr3	-,+	PRR23C,BPESC1	-60698,-1456
chrX:152486887-152487198	chrX	+	152486965	152487245	True	NM_001080485,NM_004988	chrX,chrX	+,-	ZNF275,MAGEA1	112367,-849
chr8:12294793-12296421	chr8	+	12295015	12296043	True	NR_026789,NM_001137610	chr8,chr8	+,-	FAM66A,FAM86B2	-75545,-1163
chr8:12294793-12296421	chr8	+	12053110	12053770	False	NM_001083537,NR_003494,NR_027425	chr8,chr8,chr8	-,-,+	FAM86B1,FAM86B1,FAM66D	-1486,-1486,-79871
chr21:45287563-45288566	chr21	+	45287572	45288517	True	NR_026961,NM_020132	chr21,chr21	-,+	LOC284837,AGPAT3	-55124,-2507
chr12:29940620-29941947	chr12	+	29940670	29941592	True	NM_018099,NM_001193451,NM_175861	chr12,chr12,chr12	+,-,-	FAR2,TMTC1,TMTC1	-564130,-3927,-2978
chrX:70799218-70799584	chrX	+	70799288	70799626	True	NM_052957,NM_001142797	chrX,chrX	+,-	ACRC,CXCR3	-1465,38791
chr10:70849506-70851230	chr10	+	70849966	70851248	True	NM_001057,NR_036430,NM_002727	chr10,chr10,chr10	-,+,+	TACR2,SRGN,SRGN	325477,-2189,-2189
chr3:56802380-56803447	chr3	+	56802607	56803475	True	NM_001128616,NR_024460	chr3,chr3	-,+	ARHGEF3,CCDC66	6320,-211474
chr2:11051910-11052151	chr2	+	11051985	11052117	True	NM_005742,NM_002236	chr2,chr2	-,+	PDIA6,KCNF1	-99025,-1
chr6:27097518-27099257	chr6	+	27097666	27099267	True	NM_021064,NM_003495,NM_021058	chr6,chr6,chr6	+,+,-	HIST1H2AG,HIST1H4I,HIST1H2BJ	1549,7820,1358
chr15:40635878-40636180	chr15	+	40635887	40636193	True	NM_001145643,NM_207380	chr15,chr15	+,-	PHGR1,C15orf52	7040,-2719
chr15:60913615-60913966	chr15	+	60913735	60913964	True	NM_012182,NM_002943,NM_134260	chr15,chr15,chr15	+,-,-	FOXB1,RORA,RORA	-617366,5818,5818
chr3:43140368-43141945	chr3	+	43140576	43141992	True	NM_001129908,NM_032806	chr3,chr3	+,-	FAM198A,C3orf39	-119868,5623
chr1:21875095-21875538	chr1	+	21875113	21875513	True	NM_001177520,NM_001145658	chr1,chr1	+,-	ALPL,RAP1GAP	-39306,102885
chr21:36094581-36094937	chr21	+	36094585	36094911	True	NM_004414,NR_024351	chr21,chr21	-,+	RCAN1,NCRNA00160	-107203,1193
chr1:245134597-245135047	chr1	+	245134655	245135078	True	NR_026587,NR_026586,NR_026588,NM_001143943,NM_032328,NM_031844	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-	EFCAB2,EFCAB2,EFCAB2,EFCAB2,EFCAB2,HNRNPU	-1075,-1422,-1075,-1075,-1535,-106828
chr14:69258457-69259333	chr14	+	69258614	69259312	True	NM_004926,NM_207442,NM_001193360	chr14,chr14,chr14	-,-,+	ZFP36L1,C14orf181,EXD2	523,3928,398881
chr2:172862311-172864012	chr2	+	172862519	172863980	True	NM_199227,NM_004405	chr2,chr2	+,-	METAP1D,DLX2	823,103555
chr19:49548515-49549215	chr19	+	49548612	49548702	True	NR_004383,NM_033183,NM_033377,NM_033043	chr19,chr19,chr19,chr19	+,-,-,+	SNAR-G1,CGB8,CGB1,CGB5	-8386,3716,-8421,-1561
chr19:49548515-49549215	chr19	+	49536549	49536668	False	NR_024244,NM_033378,NM_033377,NR_004383,NM_000737	chr19,chr19,chr19,chr19,chr19	-,+,-,+,-	SNAR-G2,CGB2,CGB1,SNAR-G1,CGB	-1505,-1476,3622,3608,-8956
chr19:49548515-49549215	chr19	-	49550719	49550850	False	NM_033183,NM_033142,NM_033043	chr19,chr19,chr19	-,-,+	CGB8,CGB7,CGB5	1568,8197,-3717
chr1:153600595-153601441	chr1	+	153600873	153601199	True	NM_015607,NM_001024211,NM_001024212,NM_001024213,NM_006271,NM_001024210,NM_005979	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,-,-,-,+,-,-	CHTOP,S100A13,S100A13,S100A13,S100A1,S100A13,S100A13	5325,-756,-1129,-1349,-51,5419,-158
chr6:10586109-10586821	chr6	+	10586125	10586862	True	NM_001145020,NM_145655	chr6,chr6	-,+	C6orf52,GCNT2	108030,-190
chr12:131002384-131003961	chr12	+	131002562	131003988	True	NM_004764,NM_015347	chr12,chr12	+,-	PIWIL1,RIMBP2	-180181,-152
chr17:58194281-58195203	chr17	+	58194567	58195079	True	NM_000717,NR_027408	chr17,chr17	+,-	CA4,LOC653653	32222,-14287
chr17:58194281-58195203	chr17	-	58106188	58106700	False	NM_000717,NR_002924	chr17,chr17	+,-	CA4,DHX40P1	120601,-9852
chr1:33429360-33429658	chr1	+	33429378	33429580	True	NM_002143,NM_001127361,NM_153341	chr1,chr1,chr1	+,-,-	HPCA,RNF19B,RNF19B	-77331,756,756
chr9:35900476-35901742	chr9	+	35900574	35901609	True	NR_024283,NM_001004487,NM_001039792	chr9,chr9,chr9	+,-,+	LOC158376,OR13J1,HRCT1	7870,-30176,4579
chr2:91844818-91845218	chr2	+	91844824	91845166	True	NR_003503,NR_027238	chr2,chr2	+,-	GGT8P,LOC654342	118201,2859
chr13:29607880-29608718	chr13	+	29607931	29608647	True	NM_181785,NM_001033602	chr13,chr13	-,+	SLC46A3,MTUS2	-314781,-9234
chrX:55046075-55046548	chrX	+	55046074	55046419	True	NM_014481,NM_000032	chrX,chrX	+,-	APEX2,ALAS2	-19345,11135
chr6:150185935-150186466	chr6	+	150185985	150186502	True	NM_025217,NM_032832	chr6,chr6	+,-	ULBP2,LRP11	76633,-505
chr8:37731534-37732031	chr8	+	37731563	37731982	True	NM_018310,NM_032777	chr8,chr8	-,+	BRF2,GPR124	-24132,-77213
chr5:6711585-6712361	chr5	+	6711820	6712355	True	NM_001171805,NR_037947,NM_006999	chr5,chr5,chr5	+,-,+	PAPD7,NSUN2,PAPD7	2362,-78347,2362
chrX:49969375-49969856	chrX	+	49969396	49969750	True	NM_003886,NM_033031,NM_139289	chrX,chrX,chrX	-,+,-	AKAP4,CCNB3,AKAP4	-3732,57789,-4392
chr21:43188776-43189029	chr21	+	43188800	43189076	True	NR_024028,NM_020639	chr21,chr21	+,-	NCRNA00112,RIPK4	-52261,-1551
chr6:24720430-24720907	chr6	+	24720527	24720701	True	NM_030939,NM_018473	chr6,chr6	-,+	C6orf62,ACOT13	-1124,-53315
chr1:44412673-44413187	chr1	+	44412726	44413106	True	NM_014652,NM_006934	chr1,chr1	+,-	IPO13,SLC6A9	-299,69941
chr12:8538014-8538242	chr12	+	8538066	8538224	True	NM_001007033,NR_024420	chr12,chr12	+,-	CLEC6A,LOC389634	70366,5174
chr11:108389558-108390600	chr11	+	108389575	108390202	True	NM_153705,NM_004398	chr11,chr11	-,+	KDELC2,DDX10	-20416,145613
chr8:143777635-143779052	chr8	+	143777819	143778881	True	NM_017527,NM_003724,NM_001160354,NM_001160355	chr8,chr8,chr8,chr8	+,-,+,+	LY6K,JRK,LY6K,LY6K	2647,-26418,2647,2647
chrX:113280749-113282245	chrX	+	113280860	113282248	True	NM_000868,NM_000640	chrX,chrX	+,-	HTR2C,IL13RA2	536302,970009
chr1:18434941-18435451	chr1	+	18434946	18435444	True	NM_032880,NM_018715	chr1,chr1	+,-	IGSF21,RCC2	-757,-668726
chrX:153776025-153777489	chrX	+	153776230	153777126	True	NM_003639,NM_001099856,NM_001099857,NM_001042351,NM_000402,NM_001145255	chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,-,-,+	IKBKG,IKBKG,IKBKG,G6PD,G6PD,IKBKG	-219,-5822,-719,-443,-997,-719
chr5:140249078-140249303	chr5	+	140249094	140249338	True	NM_018903,NM_018902,NM_031861,NM_002109,NM_031864	chr5,chr5,chr5,chr5,chr5	+,+,+,-,+	PCDHA12,PCDHA11,PCDHA11,HARS,PCDHA12	5592,-1314,-1314,-178123,5592
chr2:9983355-9983581	chr2	+	9983365	9983601	True	NM_006826,NM_005680	chr2,chr2	-,+	YWHAQ,TAF1B	-212259,-31
chr5:131889553-131891298	chr5	+	131889670	131891187	True	NM_005732,NM_000879	chr5,chr5	+,-	RAD50,IL5	1428,-10456
chr6:157744687-157745061	chr6	+	157744897	157744979	True	NM_018452,NM_024630	chr6,chr6	-,+	C6orf35,ZDHHC14	324,57577
chr13:41495191-41495575	chr13	+	41495197	41495563	True	NR_030352,NR_003365	chr13,chr13	+,-	MIR621,SUGT1P3	-110346,373
chr18:21270780-21271829	chr18	+	21270983	21271882	True	NM_001127717,NM_173505,NM_198129	chr18,chr18,chr18	+,-,+	LAMA3,ANKRD29,LAMA3	-1473,-28134,-1473
chr7:64992761-64993662	chr7	+	64993040	64993718	True	NM_000181,NR_027392	chr7,chr7	-,+	GUSB,INTS4L2	453641,119058
chr7:64992761-64993662	chr7	-	64627562	64628240	False	NR_027393,NM_001007253	chr7,chr7	+,-	INTS4L1,ERV3	-26018,-160438
chr7:64992761-64993662	chr7	-	65138768	65139447	False	NM_000181,NR_027392	chr7,chr7	-,+	GUSB,INTS4L2	307905,-26050
chr7:64992761-64993662	chr11	+	77652213	77652901	False	NM_024684,NM_033547	chr11,chr11	+,-	C11orf67,INTS4	-120056,52874
chr19:54370398-54370646	chr19	+	54370480	54370660	True	NM_138373,NM_144687,NM_001020821,NM_001020820,NM_001020818,NM_001020819	chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+	MYADM,NLRP12,MYADM,MYADM,MYADM,MYADM	476,-42832,1999,-920,2120,476
chr16:2029337-2029656	chr16	+	2029412	2029628	True	NM_144603,NM_172168,NM_172167,NM_005262,NM_006453	chr16,chr16,chr16,chr16,chr16	-,-,-,+,+	NOXO1,NOXO1,NOXO1,GFER,TBL3	1862,1606,1606,4521,-7399
chr16:5147858-5148245	chr16	+	5148126	5148238	True	NM_019109,NM_201400,NM_201598	chr16,chr16,chr16	+,-,-	ALG1,FAM86A,FAM86A	-26367,-337,-337
chr2:238534884-238535308	chr2	+	238534985	238535335	True	NM_001137550,NR_033308	chr2,chr2	+,-	LRRFIP1,RAB17	888,-35216
chr18:48725648-48727145	chr18	+	48725876	48727056	True	NM_005359,NM_016626	chr18,chr18	+,-	SMAD4,MEX3C	-169344,-1825
chr1:31660908-31661999	chr1	+	31660918	31661932	True	NM_024522,NM_016505	chr1,chr1	-,+	NKAIN1,ZCCHC17	50853,107909
chr2:69197170-69198181	chr2	+	69197202	69198152	True	NM_182536,NM_019617	chr2,chr2	-,+	GKN2,GKN1	-17100,3552
chr4:113604885-113605879	chr4	+	113605372	113605532	True	NM_015454,NR_029857	chr4,chr4	+,-	LARP7,MIR302B	-46818,-35659
chr2:47598277-47598552	chr2	+	47598290	47598594	True	NR_030286,NM_001743,NM_002354	chr2,chr2,chr2	+,-,+	MIR559,CALM2,EPCAM	6219,-194550,-2062
chr12:57029611-57029942	chr12	+	57029630	57029832	True	NR_003046,NM_002898,NM_013449,NR_002737	chr12,chr12,chr12,chr12	-,+,-,-	SNORD59B,RBMS2,BAZ2A,SNORD59A	7756,-114075,381,9103
chr17:4460491-4461799	chr17	+	4460493	4461452	True	NM_198501,NM_001122890,NM_014520,NM_153338,NM_001105538	chr17,chr17,chr17,chr17,chr17	+,-,-,-,-	SMTNL2,GGT6,MYBBP1A,GGT6,MYBBP1A	25823,2474,-1812,2474,-1812
chr17:10369384-10370643	chr17	+	10369560	10370674	True	NM_017533,NM_020233	chr17,chr17	-,+	MYH4,C17orf48	2263,230252
chr19:45874440-45876413	chr19	+	45874640	45875977	True	NM_001130867,NM_177417,NM_000400	chr19,chr19,chr19	-,+,-	ERCC2,KLC3,ERCC2	-795,-30694,-795
chr20:34561422-34563014	chr20	+	34561705	34562855	True	NM_080834,NM_016558	chr20,chr20	+,-	C20orf152,SCAND1	-5228,-18424
chr3:38316053-38316608	chr3	+	38316085	38316601	True	NM_004256,NR_024024	chr3,chr3	+,-	SLC22A13,ACAA1	-8838,-137352
chr13:32890029-32890381	chr13	+	32890082	32890374	True	NM_000059,NM_001136571	chr13,chr13	+,-	BRCA2,ZAR1L	-523,-3991
chr2:85360012-85360418	chr2	+	85360031	85360453	True	NM_006464,NM_031283	chr2,chr2	-,+	TGOLN2,TCF7L1	194971,129
chr17:37782149-37782349	chr17	+	37782152	37782326	True	NM_181505,NM_006160,NM_032192	chr17,chr17,chr17	+,-,+	PPP1R1B,NEUROD2,PPP1R1B	2426,-17977,852
chr11:72463617-72464114	chr11	+	72463650	72464104	True	NM_001040118,NM_033388	chr11,chr11	-,+	ARAP1,ATG16L2	-216,61346
chr19:49259624-49260099	chr19	+	49259623	49260145	True	NM_019113,NM_000148,NM_182575	chr19,chr19,chr19	+,-,-	FGF21,FUT1,IZUMO1	-330,-976,-9457
chr22:16204000-16204312	chr22	+	16204021	16204348	True	NR_001591,NM_001136213	chr22,chr22	+,-	psiTPTE22,POTEH	878452,83639
chr22:16204000-16204312	chr14	-	19638674	19639001	False	NM_001145442,NR_027480	chr14,chr14	-,+	POTEM,POTEG	381323,-85360
chr22:16204000-16204312	chr14	+	19936386	19936713	False	NM_001145442,NM_172194	chr14,chr14	-,+	POTEM,OR4Q3	83609,278873
chr1:112300773-112301485	chr1	+	112301040	112301486	True	NM_198926,NM_007204	chr1,chr1	-,+	C1orf183,DDX20	-2621,-2908
chr5:79787402-79788268	chr5	+	79787488	79788254	True	NM_205548,NM_001004441	chr5,chr5	+,-	FAM151B,ANKRD34B	-3740,78100
chr1:110282666-110283079	chr1	+	110282726	110282940	True	NM_000851,NR_024537,NM_000849	chr1,chr1,chr1	+,-,-	GSTM5,GSTM3,GSTM3	-27913,770,770
chr2:106684381-106686199	chr2	+	106684700	106686189	True	NM_025076,NM_032411	chr2,chr2	-,+	UXS1,C2orf40	124656,-2645
chr10:61665377-61665592	chr10	+	61665377	61665437	True	NM_005436,NM_001143774	chr10,chr10	-,+	CCDC6,PHYHIPL	1027,-728201
chr17:72582739-72583311	chr17	+	72582777	72583353	True	NM_152460,NM_001115152	chr17,chr17	+,-	C17orf77,CD300LD	-1771,5073
chr7:149569265-149570034	chr7	+	149569485	149569915	True	NM_001100592,NM_145230,NR_027040	chr7,chr7,chr7	+,+,-	ATP6V0E2,ATP6V0E2,LOC401431	141,141,1086
chr2:27717328-27717703	chr2	+	27717330	27717396	True	NM_022823,NM_015662,NM_001486	chr2,chr2,chr2	-,-,+	FNDC4,IFT172,GCKR	780,-4759,2309
chr6:55098163-55100017	chr6	+	55098744	55100072	True	NM_001526,NM_001042406	chr6,chr6	+,-	HCRTR2,HMGCLL1	-59732,343997
chr2:206952765-206954655	chr2	+	206952913	206954508	True	NM_001037663,NM_017759	chr2,chr2	+,-	EEF1B2,INO80D	69809,-2007
chr19:34744743-34744960	chr19	+	34744823	34745004	True	NR_027620,NM_014686	chr19,chr19	-,+	LOC643719,KIAA0355	323642,451
chr19:45170472-45172137	chr19	+	45170519	45170725	True	NM_001127893,NM_020219,NR_027754	chr19,chr19,chr19	+,+,-	CEACAM19,CEACAM19,CEACAM22P	3998,3998,-110369
chr9:39741372-39742636	chr9	+	39741978	39742170	True	NR_003528,NM_001085452	chr9,chr9	-,+	LOC653501,FAM75A1	-277452,142804
chr9:39741372-39742636	chr9	+	39212763	39212848	False	NM_033655,NM_001085452	chr9,chr9	-,+	CNTNAP3,FAM75A1	75509,142850
chr7:7567160-7568653	chr7	+	7567215	7568508	True	NM_001037763,NM_019005	chr7,chr7	-,+	COL28A1,MIOS	7011,38107
chr19:53609787-53610601	chr19	+	53609969	53610445	True	NM_001191055,NM_033288,NM_001102603,NM_198893	chr19,chr19,chr19,chr19	+,-,-,-	HERV-V2,ZNF160,ZNF160,ZNF160	-62038,-3282,-3282,-3282
chr19:50400883-50401162	chr19	+	50400887	50401169	True	NM_152899,NM_024682	chr19,chr19	-,+	IL4I1,TBC1D17	-740,-20256
chr15:85292418-85293252	chr15	+	85292635	85293259	True	NM_014630,NM_014300	chr15,chr15	+,-	ZNF592,SEC11A	-868,-32961
chr17:35712967-35713614	chr17	+	35713259	35713669	True	NM_198836,NM_173625	chr17,chr17	-,+	ACACA,C17orf78	2448,19315
chr18:57567868-57568082	chr18	+	57567918	57568014	True	NM_133459,NM_021127	chr18,chr18	-,+	CCBE1,PMAIP1	-203274,-784
chr19:39108493-39109210	chr19	+	39108801	39109210	True	NM_013234,NM_007181,NM_001042600	chr19,chr19,chr19	+,-,-	EIF3K,MAP4K1,MAP4K1	511,-158,-158
chr13:46622638-46623209	chr13	+	46622749	46622970	True	NM_015070,NM_152719	chr13,chr13	-,+	ZC3H13,SPERT	3983,-346361
chr2:29394543-29395709	chr2	+	29394889	29395724	True	NM_001029883,NM_024692	chr2,chr2	-,+	C2orf71,CLIP4	-97762,-56644
chr22:25093040-25093335	chr22	+	25093064	25093276	True	NR_024593,NR_024494	chr22,chr22	-,+	POM121L10P,BCRP3	-37950,-64233
chr2:232575874-232576355	chr2	+	232575918	232576355	True	NM_001099285,NR_036052,NR_036263,NR_036262,NM_002823,NM_002601	chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,+,-	PTMA,MIR1244-1,MIR1244-3,MIR1244-2,PTMA,PDE6D	-2734,1668,1668,1668,-2734,69670
chr6:55211326-55213304	chr6	+	55212108	55213266	True	NM_207410,NM_001042406	chr6,chr6	+,-	GFRAL,HMGCLL1	-19892,230796
chr19:58481043-58482039	chr19	+	58481278	58481949	True	NR_036508,NM_152474	chr19,chr19	+,-	LOC100128398,C19orf18	32312,4014
chr4:6781591-6781838	chr4	+	6781601	6781863	True	NM_001100590,NM_203462,NM_014743	chr4,chr4,chr4	+,-,+	KIAA0232,MRFAP1L1,KIAA0232	2595,-69995,2595
chr1:51422340-51423182	chr1	+	51422722	51423007	True	NM_001262,NM_007051	chr1,chr1	+,-	CDKN2C,FAF1	11359,2986
chr17:72357799-72358040	chr17	+	72357866	72358052	True	NM_181790,NM_001080466	chr17,chr17	+,-	GPR142,BTBD17	5592,-28
chr17:61996903-61997253	chr17	+	61996928	61997054	True	NM_001318,NM_022579,NM_022581,NM_000515,NM_022560,NM_022561,NM_022562,NM_022580,NR_002947,NM_022559	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,-,-,-,+,-	CSHL1,CSHL1,CSHL1,GH1,GH1,GH1,GH1,CSHL1,TCAM1P,GH1	-8310,-8310,-8310,-730,-730,-730,-730,-8310,-62603,-730
chr2:193058330-193058906	chr2	+	193058411	193058879	True	NM_001031716,NM_016192	chr2,chr2	+,-	OBFC2A,TMEFF2	-515601,815
chr13:114313034-114313338	chr13	+	114313160	114313244	True	NM_000705,NM_002929	chr13,chr13	-,+	ATP4B,GRK1	-647,8352
chr16:3285317-3285966	chr16	+	3285454	3286015	True	NR_002169,NM_003454,NM_001145447,NM_198088,NM_198087,NM_001145448,NM_001145446	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,-,-,-,-	OR1F2P,ZNF200,ZNF200,ZNF200,ZNF200,ZNF200,ZNF200	-19943,-268,-268,2,3,2,3
chr1:11255780-11256124	chr1	+	11255842	11256127	True	NM_021146,NM_004958	chr1,chr1	+,-	ANGPTL7,MTOR	-6499,66531
chr19:49546873-49547698	chr19	+	49547063	49547135	True	NR_004383,NM_033183,NM_033377,NM_033043	chr19,chr19,chr19,chr19	+,-,-,+	SNAR-G1,CGB8,CGB1,CGB5	-6837,5283,-6872,-12
chr9:99383515-99384595	chr9	+	99383569	99384394	True	NR_026792,NM_003671,NM_033331	chr9,chr9,chr9	+,-,-	LOC441455,CDC14B,CDC14B	103708,-1457,-1457
chr16:86775072-86775294	chr16	+	86775100	86775234	True	NM_005250,NR_027490	chr16,chr16	+,-	FOXL1,MTHFSD	-163036,-186259
chr14:76127888-76128758	chr14	+	76127950	76128655	True	NM_015072,NM_007176	chr14,chr14	+,-	TTLL5,C14orf1	-450,-412
chr11:118764489-118765226	chr11	+	118764609	118765263	True	NM_182557,NM_032966	chr11,chr11	-,+	BCL9L,CXCR5	16400,-559
chr19:4794095-4795336	chr19	+	4794272	4795102	True	NM_182919,NM_018708	chr19,chr19	-,+	TICAM1,FEM1A	36685,-2595
chr11:121326324-121326625	chr11	+	121326324	121326440	True	NR_029671,NM_003105	chr11,chr11	-,+	MIR125B1,SORL1	644162,-3471
chr18:22049900-22051493	chr18	+	22049931	22051155	True	NM_021624,NM_001160166,NM_080597,NM_001143828	chr18,chr18,chr18,chr18	+,+,-,+	HRH4,HRH4,OSBPL1A,HRH4	-9389,-9389,-72141,-9389
chr13:51421758-51423249	chr13	+	51421902	51423124	True	NM_198989,NM_024570	chr13,chr13	-,+	DLEU7,RNASEH2B	-4017,60689
chr8:37395651-37397221	chr8	+	37395881	37397171	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	156129,208443
chr19:58875390-58876070	chr19	+	58875392	58875978	True	NM_198458,NR_015380	chr19,chr19	-,+	ZNF497,A1BG-AS1	-1272,-12107
chr3:105086188-105086470	chr3	+	105086213	105086519	True	NM_170662,NM_001627	chr3,chr3	-,+	CBLB,ALCAM	501418,-551
chr9:138453695-138454080	chr9	+	138453822	138454066	True	NM_144654,NM_002571,NM_001018049	chr9,chr9,chr9	-,+,+	C9orf116,PAEP,PAEP	-62061,-269,-269
chr16:29823805-29824597	chr16	+	29823865	29824465	True	NM_017458,NM_024516,NM_005115,NM_006319,NM_145239,NM_001042539,NM_002383	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,-,+,+,+	MVP,C16orf53,MVP,CDIPT,PRRT2,MAZ,MAZ	7249,3062,7249,50163,-507,-6061,-6061
chr14:51133888-51134115	chr14	+	51133975	51134137	True	NM_021818,NM_181598	chr14,chr14	-,+	SAV1,ATL1	936,-107290
chr8:134584890-134585332	chr8	+	134584973	134585322	True	NM_003033,NR_037944,NM_173344	chr8,chr8,chr8	-,+,-	ST3GAL1,WISP1,ST3GAL1	-790,-381742,-790
chr3:132039388-132040342	chr3	+	132039401	132040378	True	NM_001099,NM_001134194,NM_130808	chr3,chr3,chr3	+,+,-	ACPP,ACPP,CPNE4	-3255,-3255,-285557
chr1:151513667-151514355	chr1	+	151513892	151514352	True	NM_001126337,NM_145796,NM_020127,NR_030280	chr1,chr1,chr1,chr1	+,-,+,+	TUFT1,POGZ,TUFT1,MIR554	-1169,-81951,-1169,3919
chr8:119634211-119634432	chr8	+	119634220	119634480	True	NM_207506,NM_006438,NM_001101676	chr8,chr8,chr8	-,+,-	SAMD12,COLEC10,SAMD12	-36,444943,-36
chr6:27883422-27885250	chr6	+	27883707	27885278	True	NM_033057,NM_003527	chr6,chr6	-,+	OR2B2,HIST1H2BO	-3533,-22555
chr18:19288539-19288997	chr18	+	19288691	19288995	True	NM_138340,NR_031565	chr18,chr18	-,+	ABHD3,MIR320C1	-3925,-25284
chr17:4853854-4855147	chr17	+	4853978	4855102	True	NM_005022,NM_001976,NM_001193503,NM_053013	chr17,chr17,chr17,chr17	-,+,+,+	PFN1,ENO3,ENO3,ENO3	-2153,-113,-113,-113
chr15:93342745-93344218	chr15	+	93342787	93343832	True	NR_033769,NM_207446	chr15,chr15	+,-	ASB9P1,FAM174B	-4130,-143756
chr9:97136848-97137064	chr9	+	97136868	97136938	True	NM_017561,NM_032558	chr9,chr9	-,+	FAM22F,HIATL1	-45942,-86
chr9:97136848-97137064	chr9	-	99775799	99775849	False	NM_001045477,NR_002894	chr9,chr9	+,-	FAM22G,HIATL2	-84564,63
chr1:111774284-111775854	chr1	+	111774679	111775701	True	NM_001025199,NM_004000,NM_024901,NM_001025197	chr1,chr1,chr1,chr1	+,+,-,+	CHI3L2,CHI3L2,DENND2D,CHI3L2	-2399,-4451,-31398,-4451
chr11:57526962-57527981	chr11	+	57527006	57527640	True	NM_001085468,NM_001085469,NM_001085459,NM_001085458,NM_001085462,NM_001085463,NM_001085460,NM_001085461,NM_001085466,NM_001085467,NM_001085464,NM_001085465,NM_001331,NM_001145101	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,+,+,+,+,+,+,+,+,-	CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,CTNND1,BTBD18	1593,1593,1593,1593,1593,1593,1593,1593,1593,1593,1593,1593,1593,-7753
chr1:196972432-196972905	chr1	+	196972665	196972925	True	NM_030787,NM_001994	chr1,chr1	+,-	CFHR5,F13B	-26064,63530
chr8:87383185-87384343	chr8	+	87383418	87384074	True	NM_007013,NM_016033	chr8,chr8	+,-	WWP1,FAM82B	-28486,136995
chr6:116574205-116574735	chr6	+	116574329	116574567	True	NM_021648,NM_001080976	chr6,chr6	-,+	TSPYL4,DSE	744,26715
chr18:32957496-32957817	chr18	+	32957576	32957824	True	NM_145756,NR_024566	chr18,chr18	-,+	ZNF396,ZNF271	-275,-87391
chr12:43963540-43964305	chr12	+	43963566	43964192	True	NM_025003,NM_001114182	chr12,chr12	-,+	ADAMTS20,IRAK4	-17842,188554
chr11:110583349-110583758	chr11	+	110583354	110583752	True	NM_020809,NM_004109	chr11,chr11	-,+	ARHGAP20,FDX1	97,-282811
chr7:29186093-29186939	chr7	+	29186157	29186903	True	NM_031311,NM_004067,NM_019029	chr7,chr7,chr7	-,+,-	CPVL,CHN2,CPVL	-4,47217,-4
chr12:48151758-48152036	chr12	+	48151775	48151995	True	NM_001098532,NM_001098531,NM_006105,NM_017842	chr12,chr12,chr12,chr12	-,-,-,+	RAPGEF3,RAPGEF3,RAPGEF3,SLC48A1	236,944,299,14971
chr11:63752742-63753374	chr11	+	63752979	63753372	True	NM_017670,NR_003089,NM_173587	chr11,chr11,chr11	+,+,-	OTUB1,OTUB1,RCOR2	-48,-48,-68663
chr21:46347845-46348144	chr21	+	46347990	46348088	True	NM_058190,NM_000211,NM_001127491	chr21,chr21,chr21	+,-,-	C21orf70,ITGB2,ITGB2	11866,-7025,715
chr3:50711661-50711957	chr3	+	50711711	50711949	True	NM_145071,NM_004947	chr3,chr3	-,+	CISH,DOCK3	-62449,722
chr8:102136602-102137265	chr8	+	102137054	102137197	True	NM_001042511,NR_033962	chr8,chr8	-,+	ZNF706,FLJ42969	80727,-72837
chr12:97856760-97857021	chr12	+	97856907	97857073	True	NR_024037,NR_036189	chr12,chr12	+,-	RMST,MIR4303	1725,532207
chr10:124743940-124745193	chr10	+	124744252	124745162	True	NM_153336,NM_022466	chr10,chr10	+,-	PSTK,IKZF5	-4756,23199
chr15:25455989-25456235	chr15	+	25455991	25456257	True	NR_003315,NR_003314,NR_003313,NR_003312,NR_003311,NR_003310,NR_003496,NR_022010,NR_003495,NR_003309,NM_130838,NR_003342,NR_003343,NR_003307	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,+,-,+,+,+	SNORD115-23,SNORD115-22,SNORD115-21,SNORD115-20,SNORD115-19,SNORD115-18,HBII-52-27,PAR4,SNORD115-24,SNORD115-17,UBE3A,SNORD115-25,SNORD115-26,SNORD115-15	685,-977,-4633,-4633,-6538,-6538,9392,581,2548,-6538,194446,4430,7506,-4633
chr17:40332532-40332956	chr17	+	40332603	40332923	True	NM_001524,NM_033194,NM_012285	chr17,chr17,chr17	-,+,-	HCRT,HSPB9,KCNH4	4597,-57898,423
chr9:104160655-104161120	chr9	+	104160666	104161084	True	NM_197977,NM_003452,NM_019051	chr9,chr9,chr9	+,+,-	ZNF189,ZNF189,MRPL50	78,78,83
chr8:42626385-42626909	chr8	+	42626643	42626915	True	NM_001199279,NM_000749,NM_004198	chr8,chr8,chr8	-,+,-	CHRNA6,CHRNB3,CHRNA6	-2714,-74143,-2714
chr4:83797422-83798935	chr4	+	83797550	83798789	True	NM_024672,NM_001191049	chr4,chr4	+,-	THAP9,SEC31A	23047,13608
chr9:21802596-21802817	chr9	+	21802628	21802750	True	NM_058197,NM_002451	chr9,chr9	-,+	CDKN2A,MTAP	172126,-44
chr19:45003539-45003981	chr19	+	45003553	45003999	True	NM_001205280,NM_013256	chr19,chr19	+,-	LOC147710,ZNF180	112940,625
chr16:66967494-66967942	chr16	+	66967509	66967969	True	NM_003869,NM_016062,NM_198061,NM_001128850,NM_004165,NR_024525,NR_036684	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,-,+,-,-,-,+	CES2,FAM96B,CES2,RRAD,RRAD,FAM96B,CES2	377,401,377,-8070,-8070,401,404
chr17:4837246-4837671	chr17	+	4837284	4837544	True	NM_000173,NM_001165417,NM_015528,NM_003562,NM_001165418	chr17,chr17,chr17,chr17,chr17	+,-,+,-,-	GP1BA,SLC25A11,RNF167,SLC25A11,SLC25A11	-1743,5968,6085,5968,5968
chr22:41865429-41866488	chr22	+	41865642	41866533	True	NM_032758,NM_001098	chr22,chr22	-,+	PHF5A,ACO2	-934,-564
chr7:29689583-29689805	chr7	+	29689668	29689732	True	NR_036482,NR_024278	chr7,chr7	+,-	DPY19L2P3,LOC646762	35037,35072
chr7:32535464-32535716	chr7	+	32535517	32535681	True	NM_012322,NM_001130710,NR_024466,NM_001139499,NM_015060	chr7,chr7,chr7,chr7,chr7	-,-,-,-,+	LSM5,LSM5,LSM5,LSM5,AVL9	-5494,-647,-5042,-647,-392
chr12:57035871-57036564	chr12	+	57036069	57036522	True	NR_003046,NM_002898,NM_003725,NM_001686,NM_013449,NR_002737	chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,-,-,-	SNORD59B,RBMS2,HSD17B6,ATP5B,BAZ2A,SNORD59A	1073,-120513,120585,3387,-5906,2420
chr1:170500748-170501209	chr1	+	170500830	170501176	True	NM_001146039,NM_152281,NR_027397,NR_026957	chr1,chr1,chr1,chr1	+,+,+,-	GORAB,GORAB,GORAB,LOC284688	86,86,86,-247481
chr8:104071754-104072286	chr8	+	104071761	104072077	True	NM_001695,NR_027071	chr8,chr8	+,-	ATP6V1C1,C8orf56	-38572,81543
chr17:45774574-45775022	chr17	+	45774622	45775044	True	NM_014726,NM_145798	chr17,chr17	+,-	TBKBP1,OSBPL7	-2043,124153
chr1:150663679-150665578	chr1	+	150664022	150665630	True	NM_018178,NR_036211	chr1,chr1	-,+	GOLPH3L,MIR4257	4100,-139675
chr1:27668996-27669600	chr1	+	27669072	27669464	True	NM_032872,NM_001193308,NM_004672	chr1,chr1,chr1	+,+,-	SYTL1,SYTL1,MAP3K6	-640,-640,23923
chr8:102182729-102184396	chr8	+	102182777	102184427	True	NM_001042511,NR_033962	chr8,chr8	-,+	ZNF706,FLJ42969	33496,-118546
chr16:49317842-49318745	chr16	+	49317987	49318767	True	NM_144602,NM_004352	chr16,chr16	+,-	C16orf78,CBLN1	89040,-2245
chr8:141644141-141644408	chr8	+	141644161	141644351	True	NR_023360,NM_001164623,NM_012154	chr8,chr8,chr8	+,-,-	CHRAC1,EIF2C2,EIF2C2	-122797,1345,1345
chr22:50690258-50690496	chr22	+	50690290	50690520	True	NM_032019,NM_002969,NM_031454,NM_020461,NM_001159286	chr22,chr22,chr22,chr22,chr22	-,-,+,-,-	HDAC10,MAPK12,SELO,TUBGCP6,HDAC10	-456,9619,-50933,-6890,-456
chr20:19736678-19738091	chr20	+	19737415	19738000	True	NM_016652,NM_018993	chr20,chr20	-,+	CRNKL1,RIN2	298741,132209
chr12:72077734-72079234	chr12	+	72077830	72079144	True	NM_018279,NM_144982	chr12,chr12	+,-	TMEM19,ZFC3H1	733,-20081
chr12:54718800-54719010	chr12	+	54718802	54718924	True	NM_016057,NM_001136023	chr12,chr12	+,-	COPZ1,NFE2	-14,-24011
chr10:100173325-100174571	chr10	+	100173578	100174478	True	NM_014472,NM_032709	chr10,chr10	+,-	C10orf28,PYROXD2	-279250,550
chr12:107714089-107714367	chr12	+	107714201	107714415	True	NM_001018072,NM_004075	chr12,chr12	+,-	BTBD11,CRY1	-2055,-226603
chr8:27629502-27629848	chr8	+	27629574	27629774	True	NM_018246,NM_001017420	chr8,chr8	-,+	CCDC25,ESCO2	446,2283
chr6:45340974-45341378	chr6	+	45341012	45341211	True	NM_003599,NM_001024630,NM_181356	chr6,chr6,chr6	-,+,-	SUPT3H,RUNX2,SUPT3H	4415,-45015,4510
chr3:39117484-39117914	chr3	+	39117569	39117788	True	NM_020839,NM_031899	chr3,chr3	+,-	WDR48,GORASP1	-24115,31393
chr12:112122766-112123435	chr12	+	112122853	112123377	True	NM_006768,NM_001136538,NM_025247	chr12,chr12,chr12	-,+,+	BRAP,ACAD10,ACAD10	463,479,479
chr22:42394693-42395049	chr22	+	42394833	42394977	True	NM_152613,NM_024053	chr22,chr22	+,-	WBP2NL,CENPM	-155,-51685
chr2:27369792-27370290	chr2	+	27369791	27370101	True	NM_178553,NM_175769	chr2,chr2	-,+	C2orf53,TCF23	-7459,1843
chr1:57045449-57045697	chr1	+	57045514	57045729	True	NM_003713,NM_006252	chr1,chr1	-,+	PPAP2B,PRKAA2	-257,65260
chr11:8987310-8988739	chr11	+	8987407	8988429	True	NM_182901,NM_020644	chr11,chr11	+,-	C11orf17,TMEM9B	-54657,-1418
chr19:18667318-18668096	chr19	+	18667486	18667970	True	NM_001171949,NM_001171948,NM_012181,NM_024069	chr19,chr19,chr19,chr19	+,+,-,+	C19orf50,C19orf50,FKBP8,C19orf50	601,601,-13103,601
chr10:26727193-26727672	chr10	+	26727233	26727635	True	NM_001012750,NM_019043	chr10,chr10	-,+	ABI1,APBB1IP	422431,-18
chr5:76386155-76387321	chr5	+	76386658	76387007	True	NR_024398,NM_032367	chr5,chr5	+,-	LOC728723,ZBED3	-4099,-3628
chr2:178075554-178076989	chr2	+	178075841	178076682	True	NM_194247,NR_036075	chr2,chr2	+,-	HNRNPA3,MIR3128	739,44107
chr1:209605522-209605935	chr1	+	209605526	209605954	True	NR_029622,NM_001104548,NR_036213	chr1,chr1,chr1	+,+,-	MIR205,LOC642587,MIR4260	-99,-3409,190951
chr9:130714018-130714512	chr9	+	130714162	130714482	True	NM_203305,NM_001006641	chr9,chr9	-,+	FAM102A,SLC25A25	-1169,115996
chr9:103097776-103098303	chr9	+	103097776	103097974	True	NM_001161584,NM_001198807	chr9,chr9	-,+	TEX10,C9orf30	16937,91520
chr17:79605618-79606392	chr17	+	79605661	79606234	True	NM_017921,NM_031945	chr17,chr17	-,+	NPLOC4,TSPAN10	-1523,3114
chr17:33896997-33898051	chr17	+	33897401	33897718	True	NR_003037,NM_000286	chr17,chr17	+,-	SNORD7,PEX12	2957,7995
chr19:44144101-44144545	chr19	+	44144226	44144554	True	NM_001145641,NM_145296	chr19,chr19	+,-	SRRM5,CADM4	-28024,-235
chr6:133135934-133136264	chr6	+	133135994	133136278	True	NM_052831,NR_002436,NR_002435,NM_001016,NR_002434	chr6,chr6,chr6,chr6,chr6	-,+,+,+,+	C6orf192,SNORA33,SNORD100,RPS12,SNORD101	-16247,2079,1662,-337,167
chr15:33008924-33009282	chr15	+	33008970	33009323	True	NM_013372,NM_001191323,NM_001191322,NR_036650	chr15,chr15,chr15,chr15	+,+,+,-	GREM1,GREM1,GREM1,LOC100288615	881,881,881,-183028
chr20:44462935-44463673	chr20	+	44463176	44463586	True	NM_003279,NM_033421,NM_001042632,NM_001042633,NM_152897	chr20,chr20,chr20,chr20,chr20	-,+,+,+,+	TNNC2,SNX21,SNX21,SNX21,SNX21	-7223,-757,-757,-757,-757
chr8:41751838-41753099	chr8	+	41752102	41752990	True	NM_001134296,NM_001142446	chr8,chr8	+,-	AP3M2,ANK1	257473,1340
chr9:115146979-115148199	chr9	+	115147067	115147583	True	NM_032303,NR_036085,NM_001195822,NR_036651	chr9,chr9,chr9,chr9	+,-,+,+	HSDL2,MIR3134,HSDL2,HSDL2	-4936,-34522,-4936,-4936
chr6:73329487-73330691	chr6	+	73329688	73330600	True	NM_019842,NM_001160132,NM_001160133,NM_001160130,NR_036244,NM_001160134	chr6,chr6,chr6,chr6,chr6,chr6	+,+,+,+,-,+	KCNQ5,KCNQ5,KCNQ5,KCNQ5,MIR4282,KCNQ5	970,970,970,970,346928,970
chr16:67699370-67700062	chr16	+	67699569	67699831	True	NM_016948,NM_001082487,NM_001082486,NM_022914,NM_001012984,NM_032140,NM_001037281	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,-,+,-,+	PARD6A,ACD,ACD,ACD,C16orf86,C16orf48,PARD6A	-4786,-4851,-4851,-4851,885,847,-4786
chr1:145473584-145473795	chr1	+	145473638	145473822	True	NM_001039888,NM_032305,NM_153713	chr1,chr1,chr1	+,-,+	ANKRD34A,POLR3GL,LIX1L	-3181,-3251,3262
chr11:64880470-64880765	chr11	+	64880664	64880814	True	NM_001997,NR_037568,NR_037567,NM_014205,NM_003273,NM_004927	chr11,chr11,chr11,chr11,chr11,chr11	-,+,+,-,+,+	FAU,MRPL49,MRPL49,ZNHIT2,TM7SF2,MRPL49	8908,8901,8840,4406,-1374,8901
chr8:42190918-42191147	chr8	+	42191002	42191122	True	NM_014420,NM_002690	chr8,chr8	-,+	DKK4,POLB	43602,4907
chr3:11320125-11321292	chr3	+	11320238	11321095	True	NM_006395,NM_001144912,NM_001136031,NM_001128221	chr3,chr3,chr3,chr3	+,+,+,-	ATG7,ATG7,ATG7,VGLL4	-6279,-6279,-6279,289354
chr2:10090654-10090883	chr2	+	10090659	10090883	True	NM_001037160,NM_198182	chr2,chr2	-,+	CYS1,GRHL1	129705,908
chr12:19283515-19283725	chr12	+	19283573	19283773	True	NM_019012,NM_033123,NM_001143821,NM_001190860	chr12,chr12,chr12,chr12	+,-,+,+	PLEKHA5,PLCZ1,PLEKHA5,PLEKHA5	-998,-392655,-998,-998
chr10:35928537-35928849	chr10	+	35928564	35928884	True	NM_153368,NM_031866	chr10,chr10	+,-	GJD4,FZD8	-34277,1528
chr20:3764377-3764981	chr20	+	3764388	3764850	True	NM_001810,NM_015417,NM_004358	chr20,chr20,chr20	-,-,+	CENPB,SPEF1,CDC25B	2537,-2286,11550
chr1:149763045-149764233	chr1	+	149763136	149764127	True	NM_001161334,NM_000566	chr1,chr1	-,+	HIST2H2BF,FCGR1A	19858,-8945
chr1:149763045-149764233	chr1	-	120926082	120926715	False	NM_001004340,NR_027337,NM_001017986	chr1,chr1,chr1	-,+,-	FCGR1B,HIST2H2BA,FCGR1B	9280,-20106,9280
chr1:149763045-149764233	chr1	+	149378566	149379197	False	NR_027484,NM_001024599	chr1,chr1	+,-	FCGR1C,HIST2H2BF	-9324,20089
chr1:20250532-20251203	chr1	+	20250592	20251192	True	NM_015207,NM_014589	chr1,chr1	+,-	OTUD3,PLA2G2E	-41755,-482
chr19:46523525-46524209	chr19	+	46523701	46524097	True	NR_030412,NM_005091	chr19,chr19	+,-	MIR769,PGLYRP1	-1562,2509
chr4:176921937-176923146	chr4	+	176922109	176923111	True	NM_170710,NM_005277,NM_201592	chr4,chr4,chr4	+,-,-	WDR17,GPM6A,GPM6A	63873,587,587
chr6:160769649-160769891	chr6	+	160769726	160769890	True	NM_003058,NM_021977	chr6,chr6	-,+	SLC22A2,SLC22A3	-89763,-352
chr17:15632479-15634429	chr17	+	15633026	15634462	True	NM_006470,NM_178571	chr17,chr17	-,+	TRIM16,TBC1D26	-46833,1128
chr17:15632479-15634429	chr17	-	18549227	18550281	False	NM_001037330,NM_001039397	chr17,chr17	+,-	TRIM16L,TBC1D28	75120,-1487
chr1:2285210-2285443	chr1	+	2285308	2285423	True	NM_007033,NR_024489	chr1,chr1	+,-	RER1,LOC100129534	37790,-1208
chr16:79782372-79782996	chr16	+	79782376	79782984	True	NM_005360,NM_130897	chr16,chr16	-,+	MAF,DYNLRB2	-147754,791869
chr6:83776501-83777318	chr6	+	83776810	83777297	True	NM_001199942,NM_198920,NM_015018	chr6,chr6,chr6	+,-,+	DOPEY1,UBE2CBP,DOPEY1	87,-1265,87
chr15:58454497-58456090	chr15	+	58454538	58456108	True	NM_020980,NM_170696	chr15,chr15	+,-	AQP9,ALDH1A2	-24181,-96632
chr18:77868731-77869331	chr18	+	77868753	77869359	True	NM_014913,NM_006701	chr18,chr18	+,-	ADNP2,TXNL4A	-1889,-120221
chrX:101802209-101802434	chrX	+	101802208	101802468	True	NR_002216,NM_021992	chrX,chrX	+,-	NXF4,TMSB15A	2424,-30509
chr4:32110489-32111287	chr4	+	32110585	32110953	True	NM_015230,NM_032457	chr4,chr4	-,+	ARAP2,PCDH7	4135086,-1388608
chrX:54817295-54817510	chrX	+	54817310	54817530	True	NM_177433,NM_198510	chrX,chrX	+,-	MAGED2,ITIH5L	16640,7193
chr1:35368244-35369243	chr1	+	35368441	35369123	True	NM_001080418,NM_002060	chr1,chr1	-,+	DLGAP3,GJA4	1911,-109893
chr2:33662712-33663575	chr2	+	33662748	33663336	True	NM_015475,NM_170672	chr2,chr2	-,+	FAM98A,RASGRP3	161086,-1383
chr11:18656463-18657009	chr11	+	18656512	18656932	True	NM_153347,NM_194285	chr11,chr11	+,-	TMEM86A,SPTY2D1	63418,-492
chr19:55290111-55291509	chr19	+	55290177	55291323	True	NM_014218,NM_001127255	chr19,chr19	+,-	KIR2DL1,NLRP7	-8963,167602
chr12:58207674-58208211	chr12	+	58207748	58208168	True	NM_001172697,NM_006576	chr12,chr12	+,-	TSFM,AVIL	-31272,1734
chr4:73935647-73936930	chr4	+	73935709	73936451	True	NM_000477,NM_173827	chr4,chr4	+,-	ALB,COX18	333520,-237
chr3:56801534-56802025	chr3	+	56801631	56801761	True	NM_001128616,NR_024460	chr3,chr3	-,+	ARHGEF3,CCDC66	8042,-210507
chr3:9773334-9773540	chr3	+	9773373	9773563	True	NM_004634,NM_003656,NM_001003694	chr3,chr3,chr3	+,-,+	BRPF1,CAMK1,BRPF1	0,38155,0
chr3:133116933-133118112	chr3	+	133116933	133117989	True	NM_003571,NM_007027	chr3,chr3	+,-	BFSP2,TOPBP1	800,262798
chr9:134582152-134582610	chr9	+	134582269	134582650	True	NM_007171,NM_198679	chr9,chr9	+,-	POMT1,RAPGEF1	-204031,2630
chr1:158221912-158222809	chr1	+	158221931	158222268	True	NM_001763,NM_001764	chr1,chr1	+,-	CD1A,CD1B	1658,79104
chr10:104630239-104630496	chr10	+	104630331	104630457	True	NM_000102,NM_020682	chr10,chr10	-,+	CYP17A1,AS3MT	-33041,-1172
chr17:18911934-18912919	chr17	+	18912412	18912962	True	NM_001039999,NM_152351	chr17,chr17	-,+	FAM83G,SLC5A10	-4352,-56986
chr19:50144279-50144664	chr19	+	50144387	50144543	True	NM_021228,NM_006270	chr19,chr19	+,-	SCAF1,RRAS	838,-987
chr9:69181485-69181885	chr9	+	69181539	69181911	True	NR_015361,NM_001098805	chr9,chr9	-,+	LOC440896,ANKRD20A4	-498,200069
chr9:69181485-69181885	chr9	-	70937491	70938024	False	NR_015423,NM_199135	chr9,chr9	-,+	LOC572558,FOXD4L3	34929,-19840
chr1:52518857-52520810	chr1	+	52518974	52520700	True	NM_015913,NM_001136497,NM_152265,NR_024350	chr1,chr1,chr1,chr1	-,+,+,+	TXNDC12,BTF3L4,BTF3L4,BTF3L4	397,1156,1156,1156
chr1:46155589-46155893	chr1	+	46155683	46155867	True	NM_021639,NM_016486	chr1,chr1	-,+	GPBP1L1,TMEM69	-3381,-1898
chr19:10220418-10220730	chr19	+	10220442	10220636	True	NM_002566,NM_031917,NM_001198690,NR_003688,NR_004381,NM_001040664,NM_020230	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+,+	P2RY11,ANGPTL6,PPAN-P2RY11,SNORD105B,SNORD105,PPAN-P2RY11,PPAN	1560,-7017,-3594,-68,-2166,-3594,-3594
chr6:127777557-127778843	chr6	+	127777612	127778876	True	NM_014702,NM_001010905	chr6,chr6	-,+	KIAA0408,C6orf58	1709,119442
chr16:75034088-75034356	chr16	+	75034109	75034403	True	NM_030581,NM_032268	chr16,chr16	-,+	WDR59,ZNRF1	-15092,-1245
chr21:33953887-33954400	chr21	+	33954124	33954371	True	NM_058187,NM_144659	chr21,chr21	+,-	C21orf63,TCP10L	-169427,3531
chr2:24268393-24269357	chr2	+	24269035	24269381	True	NM_004116,NM_025203,NM_054033,NM_001142319	chr2,chr2,chr2,chr2	+,-,+,-	FKBP1B,C2orf44,FKBP1B,C2orf44	3202,965,3202,965
chr3:49056294-49056597	chr3	+	49056360	49056511	True	NM_001009996,NM_199074,NM_199073,NR_029948,NM_199070,NR_029690,NM_018114,NM_199069	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,+,-,+,-,-,+	DALRD3,NDUFAF3,NDUFAF3,MIR425,NDUFAF3,MIR191,DALRD3,NDUFAF3	-343,1396,2106,1212,2562,1687,2012,2562
chr7:29185022-29185740	chr7	+	29185121	29185641	True	NM_031311,NM_004067,NM_019029	chr7,chr7,chr7	-,+,-	CPVL,CHN2,CPVL	562,48479,562
chr19:2840642-2840878	chr19	+	2840774	2840845	True	NM_152791,NM_001172775,NM_003021	chr19,chr19,chr19	+,+,-	ZNF555,ZNF555,SGTA	587,587,-57420
chr2:27276901-27278037	chr2	+	27276978	27277782	True	NM_001035507,NM_021831,NM_001134693	chr2,chr2,chr2	+,+,-	AGBL5,AGBL5,OST4	-2546,-2546,16835
chr2:27434260-27434464	chr2	+	27434324	27434508	True	NM_021095,NM_001170795,NM_004341,NR_028323,NM_016085,NM_080592	chr2,chr2,chr2,chr2,chr2,chr2	-,+,+,-,+,+	SLC5A6,C2orf28,CAD,SLC5A6,C2orf28,C2orf28	717,710,5749,717,710,390
chr10:92616878-92617222	chr10	+	92616891	92617215	True	NM_000872,NM_019860,NM_006413,NM_019859	chr10,chr10,chr10,chr10	-,-,+,-	HTR7,HTR7,RPP30,HTR7	506,506,14493,506
chr13:101328699-101329412	chr13	+	101328709	101329139	True	NM_032813,NM_001178004,NM_001079669	chr13,chr13,chr13	-,+,-	TMTC4,PCCA,TMTC4	-1606,-587491,-1606
chr1:209406469-209406698	chr1	+	209406557	209406747	True	NM_001104548,NR_036213	chr1,chr1	+,-	LOC642587,MIR4260	195420,390158
chr15:28821464-28821956	chr15	+	28821632	28821834	True	NR_036443,NR_033351	chr15,chr15	+,-	HERC2P9,GOLGA8F	77753,-43489
chr15:28821464-28821956	chr15	-	28580085	28580287	False	NM_004667,NR_033351	chr15,chr15	-,+	HERC2,GOLGA8F	-12790,43496
chr15:28821464-28821956	chr15	-	20723854	20724406	False	NR_036432,NR_027411	chr15,chr15	-,+	HERC2P3,GOLGA8C	-12421,43267
chr15:28821464-28821956	chr15	-	23390647	23391199	False	NR_036470,NR_002824	chr15,chr15	+,-	HERC2P7,HERC2P2	-334,-12388
chr15:28821464-28821956	chr15	-	23678346	23678898	False	NM_005664,NM_019066	chr15,chr15	+,-	MKRN3,MAGEL2	131555,214145
chr13:25087222-25088600	chr13	+	25087279	25088438	True	NM_006437,NR_002815	chr13,chr13	-,+	PARP4,LOC374491	-331,65907
chr6:132722898-132724331	chr6	+	132723146	132724212	True	NM_015529,NM_175057	chr6,chr6	-,+	MOXD1,TAAR9	-482,135214
chr19:36705545-36706128	chr19	+	36705549	36705928	True	NM_001042474,NM_007145,NM_152477,NM_001099638,NM_001099639	chr19,chr19,chr19,chr19,chr19	-,+,-,+,+	ZNF565,ZNF146,ZNF565,ZNF146,ZNF146	109,-96,5,-96,-96
chr2:131977819-131978254	chr2	+	131978135	131978211	True	NM_001009993,NM_001083538	chr2,chr2	-,+	FAM168B,POTEE	-127131,-2264
chr2:131977819-131978254	chr2	-	130875853	130875929	False	NM_001099771,NR_033903	chr2,chr2	-,+	POTEF,LOC285103	10918,11266
chr17:46692562-46693181	chr17	+	46692783	46693186	True	NM_024016,NM_004502,NR_033205	chr17,chr17,chr17	-,-,+	HOXB8,HOXB7,LOC404266	-482,-4400,-19514
chr1:178481864-178482859	chr1	+	178481998	178482856	True	NM_001170724,NM_032126,NM_001170722,NM_001170723,NM_004673	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	C1orf49,C1orf49,C1orf49,C1orf49,ANGPTL1	-7,-7,-7,-7,357409
chr19:56511286-56511821	chr19	+	56511318	56511694	True	NM_176810,NM_153447	chr19,chr19	-,+	NLRP13,NLRP5	-67616,-277
chr3:38081162-38081465	chr3	+	38081233	38081447	True	NM_006225,NM_007335,NM_007337	chr3,chr3,chr3	-,+,+	PLCD1,DLEC1,DLEC1	-10079,-588,-588
chr16:23767287-23768888	chr16	+	23767505	23768927	True	NM_033266,NM_022097	chr16,chr16	-,+	ERN2,CHP2	-42684,-1608
chr14:71109572-71109843	chr14	+	71109645	71109889	True	NM_015351,NM_005466	chr14,chr14	+,-	TTC9,MED6	-1192,-42261
chr13:111357569-111358032	chr13	+	111357619	111357994	True	NM_198218,NM_198219,NM_005537,NM_024537,NM_198217	chr13,chr13,chr13,chr13,chr13	+,+,+,-,+	ING1,ING1,ING1,CARS2,ING1	7615,7630,9364,549,7088
chr21:43640105-43640419	chr21	+	43640123	43640385	True	NM_207174,NM_004915,NM_003226,NM_016818,NM_207629	chr21,chr21,chr21,chr21,chr21	+,+,-,+,+	ABCG1,ABCG1,TFF3,ABCG1,ABCG1	-166,-907,95371,-907,-3987
chr11:3189205-3189628	chr11	+	3189259	3189625	True	NM_001144063,NM_020896,NM_145638,NR_027138	chr11,chr11,chr11,chr11	-,-,-,+	OSBPL5,OSBPL5,OSBPL5,C11orf36	-2677,-2677,-2677,49936
chr3:12416633-12417741	chr3	+	12416993	12417438	True	NM_001195279,NM_015869	chr3,chr3	-,+	LOC100129480,PPARG	169582,-24051
chr2:63279691-63279948	chr2	+	63279701	63279929	True	NR_027069,NM_014562,NM_001199770,NR_033389	chr2,chr2,chr2,chr2	-,+,+,-	LOC100132215,OTX1,OTX1,LOC100132215	-4855,-1815,-2560,-4045
chr22:25434462-25434791	chr22	+	25434477	25434837	True	NM_001001663,NM_001145206	chr22,chr22	-,+	TMEM211,KIAA1671	-99163,-10596
chr7:72969654-72970922	chr7	+	72969799	72970937	True	NM_001077621,NR_036682,NM_001707,NM_001197244	chr7,chr7,chr7,chr7	+,-,-,-	VPS37D,BCL7B,BCL7B,BCL7B	111236,715,1178,1178
chr4:7435734-7436009	chr4	+	7435956	7436054	True	NR_036238,NM_001085382	chr4,chr4	+,-	MIR4274,PSAPL1	25700,696
chrX:69267532-69267955	chrX	+	69267541	69267997	True	NM_001002254,NM_207320	chrX,chrX	-,+	AWAT2,OTUD6A	1841,14343
chr3:63427240-63429142	chr3	+	63427521	63429181	True	NM_025075,NM_144642	chr3,chr3	-,+	THOC7,SYNPR	420468,-169
chr3:108656839-108658264	chr3	+	108657262	108658044	True	NM_005459,NM_016388	chr3,chr3	-,+	GUCA1C,TRAT1	14685,-115695
chr19:49993489-49993795	chr19	+	49993521	49993651	True	NR_001285,NR_000020,NR_026712,NR_000021,NM_012423,NR_000019,NR_000018,NM_001015,NR_029703	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,+,+,+,-	SNORD35B,SNORD33,RPL13AP5,SNORD32A,RPL13A,SNORD34,SNORD35A,RPS11,MIR150	7324,222,-2711,-353,-2711,512,780,5982,10524
chr17:6339787-6340457	chr17	+	6340275	6340497	True	NM_019013,NM_014336,NM_001195228,NM_001033054,NM_001033055	chr17,chr17,chr17,chr17,chr17	+,-,+,-,-	FAM64A,AIPL1,FAM64A,AIPL1,AIPL1	7237,-1756,7237,-1756,-1756
chr5:43603545-43603901	chr5	+	43603694	43603904	True	NM_182977,NM_012343,NM_183323	chr5,chr5,chr5	+,+,-	NNT,NNT,PAIP1	-516,-954,-46173
chr2:101179942-101180395	chr2	+	101180121	101180284	True	NM_004854,NM_024065	chr2,chr2	-,+	CHST10,PDCL3	-145991,-760
chr4:187645142-187645639	chr4	+	187645158	187645499	True	NM_000128,NM_005245	chr4,chr4	+,-	F11,FAT1	-458091,-171
chr17:7183901-7184190	chr17	+	7183951	7184127	True	NM_001042,NM_015982	chr17,chr17	+,-	SLC2A4,YBX2	926,13799
chr9:138592669-138592912	chr9	+	138592744	138592854	True	NM_020822,NM_001012415,NM_001101677	chr9,chr9,chr9	+,-,-	KCNT1,SOHLH1,SOHLH1	1176,-1370,-1370
chr5:125936041-125936497	chr5	+	125936094	125936458	True	NM_001201377,NM_032177,NM_001202404,NM_001182	chr5,chr5,chr5,chr5	-,+,-,-	ALDH7A1,PHAX,ALDH7A1,ALDH7A1	-5012,148,-5012,-5012
chr16:72094030-72094800	chr16	+	72094265	72094711	True	NM_020995,NM_001126102,NM_017853,NM_005143	chr16,chr16,chr16,chr16	+,+,-,+	HPR,HP,TXNL4B,HP	2413,-5808,32878,-5808
chr1:229642509-229643720	chr1	+	229642605	229643673	True	NM_018230,NM_014777	chr1,chr1	-,+	NUP133,URB2	468,118307
chr20:31063716-31063993	chr20	+	31063726	31064010	True	NM_080616,NR_034152	chr20,chr20	-,+	C20orf112,LOC149950	7328,111270
chr2:96071869-96072405	chr2	+	96071955	96072388	True	NM_001164464,NM_016044	chr2,chr2	-,+	TRIM43B,FAHD2A	78142,-3559
chr2:96071869-96072405	chr2	-	97756561	97756794	False	NM_199336,NM_001164315	chr2,chr2	-,+	FAHD2B,ANKRD36	3839,22438
chr2:96071869-96072405	chr2	+	96680123	96680556	False	NM_207328,NR_003698	chr2,chr2	-,+	GPAT2,LOC729234	20222,-3876
chr4:459379-460727	chr4	+	459511	460646	True	NR_002451,NM_001127178	chr4,chr4	-,+	ABCA11P,PIGG	7406,32342
chr12:66217353-66217727	chr12	+	66217438	66217774	True	NM_003483,NR_026825,NM_003484	chr12,chr12,chr12	+,-,+	HMGA2,RPSAP52,HMGA2	465,3030,465
chr2:49315619-49316310	chr2	+	49315635	49316348	True	NM_000145,NM_006872	chr2,chr2	-,+	FSHR,GTF2A1L	65375,-470757
chr12:8117459-8117830	chr12	+	8117624	8117739	True	NM_006931,NM_018416	chr12,chr12	-,+	SLC2A3,FOXJ2	-28732,67619
chr19:39686435-39687096	chr19	+	39686525	39687137	True	NM_001080468,NM_001001414	chr19,chr19	-,+	SYCN,NCCRP1	7819,466
chr14:105300164-105301808	chr14	+	105300196	105301647	True	NR_024396,NM_001014432	chr14,chr14	+,-	MGC23270,AKT1	-12723,-38116
chr2:239760746-239762592	chr2	+	239761170	239762502	True	NR_034162,NM_057179	chr2,chr2	-,+	FLJ43879,TWIST2	85513,-4558
chr1:47651902-47652479	chr1	+	47652001	47652457	True	NM_005764,NM_001010969	chr1,chr1	-,+	PDZK1IP1,CYP4A22	3364,-48946
chr17:42440550-42440771	chr17	+	42440630	42440696	True	NM_198475,NM_002087	chr17,chr17	-,+	FAM171A2,GRN	589,-18190
chr17:56351179-56352035	chr17	+	56351185	56351888	True	NR_027647,NM_000250	chr17,chr17	+,-	LPO,MPO	-35449,6459
chr22:30686056-30686343	chr22	+	30686183	30686385	True	NM_001037666,NM_001017437	chr22,chr22	-,+	GATSL3,CCDC157	-567,66241
chr3:49906832-49907174	chr3	+	49906911	49907085	True	NM_203370,NM_024046	chr3,chr3	+,-	C3orf54,CAMKV	-66275,334
chr21:43916116-43916391	chr21	+	43916132	43916386	True	NM_080860,NM_018964	chr21,chr21	-,+	RSPH1,SLC37A1	65,3355
chr10:124219340-124219988	chr10	+	124219343	124220005	True	NM_001099667,NM_001010912,NM_002775	chr10,chr10,chr10	+,-,+	ARMS2,C10orf120,HTRA1	-5215,239383,1035
chr22:39356271-39356883	chr22	+	39356293	39356747	True	NM_014292,NM_001193289,NM_145699	chr22,chr22,chr22	-,+,+	CBX6,APOBEC3A,APOBEC3A	-88035,-2817,-2817
chr22:39356271-39356883	chr22	+	39386238	39386692	False	NM_014292,NM_004900	chr22,chr22	-,+	CBX6,APOBEC3B	-117980,-7884
chr1:155825695-155826064	chr1	+	155825829	155825935	True	NM_001037533,NM_032292,NM_152280	chr1,chr1,chr1	-,-,+	GON4L,GON4L,SYT11	1087,1087,3324
chr2:233404332-233404711	chr2	+	233404353	233404759	True	NM_005199,NM_145702	chr2,chr2	+,-	CHRNG,TIGD1	33,10517
chr18:57014743-57015229	chr18	+	57014925	57015274	True	NM_005570,NM_002091	chr18,chr18	-,+	LMAN1,GRP	11285,-127584
chr12:53835340-53836119	chr12	+	53835387	53836012	True	NM_001128911,NM_001128912,NM_001128913,NM_001128914,NM_031989,NM_005016,NM_001005354,NM_001193511,NM_018457,NM_001098620	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,+,+,+,+,+,-,+,+	PCBP2,PCBP2,PCBP2,PCBP2,PCBP2,PCBP2,PRR13,MAP3K12,PRR13,PCBP2	9873,9873,9873,9873,9873,9873,-5,57483,-5,9873
chr6:35181529-35181828	chr6	+	35181687	35181877	True	NM_152753,NM_018679	chr6,chr6	+,-	SCUBE3,TCP11	312,-72500
chr9:137965944-137966496	chr9	+	137965968	137966386	True	NM_014279,NM_006334,NM_002003	chr9,chr9,chr9	+,+,-	OLFM1,OLFM1,FCN1	702,716,-156162
chr3:137482265-137482541	chr3	+	137482278	137482482	True	NM_001170538,NM_004189	chr3,chr3	-,+	DZIP1L,SOX14	349890,651
chrX:102332473-102332701	chrX	+	102332620	102332696	True	NM_018476,NM_001127688	chrX,chrX	-,+	BEX1,BEX4	-13452,137323
chr12:95943809-95945271	chr12	+	95944220	95945257	True	NM_032147,NM_006838,NM_001042403	chr12,chr12,chr12	-,+,-	USP44,METAP2,USP44	57,-76455,-1600
chr8:104151393-104152242	chr8	+	104151415	104152183	True	NM_024812,NM_001024372,NR_027071	chr8,chr8,chr8	+,+,-	BAALC,BAALC,C8orf56	737,737,1437
chr7:1542313-1542667	chr7	+	1542353	1542601	True	NM_002360,NM_001080453	chr7,chr7	+,-	MAFK,INTS1	27766,1467
chr7:74282980-74283329	chr7	+	74283203	74283273	True	NM_173537,NR_027775	chr7,chr7	-,+	GTF2IRD2,PMS2P5	-15362,23620
chr5:125801688-125802361	chr5	+	125801733	125802061	True	NM_001146322,NM_001182	chr5,chr5	+,-	GRAMD3,ALDH7A1	-1003,129073
chr17:8080651-8081013	chr17	+	8080700	8080888	True	NM_032354,NM_183065,NR_037447	chr17,chr17,chr17	-,-,+	TMEM107,TMEM107,MIR3676	-986,-986,9604
chrX:53108358-53108896	chrX	+	53108390	53108928	True	NM_022117,NM_014138	chrX,chrX	+,-	TSPYL2,FAM156A	2613,-122214
chr19:1492272-1492869	chr19	+	1492607	1492879	True	NM_138393,NM_017573	chr19,chr19	+,-	REEP6,PCSK4	-1493,-2200
chr8:38828172-38829195	chr8	+	38828342	38829134	True	NM_001024380,NM_153692	chr8,chr8	-,+	TM2D2,HTRA4	24963,2533
chr5:80510281-80511180	chr5	+	80510317	80510853	True	NR_034121,NR_002754,NR_002755	chr5,chr5,chr5	-,+,+	LOC100131067,RNU5E,RNU5D	86585,-8906,-8905
chr5:11857364-11857576	chr5	+	11857363	11857621	True	NM_001332,NR_033383	chr5,chr5	-,+	CTNND2,TAG	46539,717347
chr17:59475766-59476097	chr17	+	59475791	59476135	True	NM_199290,NM_005994	chr17,chr17	-,+	NACA2,TBX2	192478,1121
chr1:230884195-230885177	chr1	+	230884239	230885079	True	NM_016452,NM_000029,NM_006615	chr1,chr1,chr1	+,-,+	CAPN9,AGT,CAPN9	-1129,-33903,-1160
chr19:11922627-11923411	chr19	+	11923109	11923449	True	NM_152357,NM_001080493	chr19,chr19	+,-	ZNF440,ZNF823	1657,-73349
chr6:71010999-71012763	chr6	+	71011303	71012545	True	NM_001105531,NM_001851	chr6,chr6	+,-	FAM135A,COL9A1	110561,291
chr1:187522417-187524020	chr1	+	187522722	187523975	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-873163,-724741
chr9:42469520-42470758	chr9	+	42469537	42470415	True	NR_003670,NR_026759	chr9,chr9	-,+	KGFLP2,FAM95B1	-449953,-999
chr9:42469520-42470758	chr9	-	43031487	43032363	False	NR_026759,NR_026558	chr9,chr9	-,+	FAM95B1,AQP7P3	999,-173386
chr9:42469520-42470758	chr9	+	69476965	69477843	False	NM_001085457,NM_001098805	chr9,chr9	-,+	CBWD6,ANKRD20A4	-214372,-95035
chr19:10451323-10453293	chr19	+	10451615	10452614	True	NM_002162,NM_133452,NM_003259	chr19,chr19,chr19	-,-,+	ICAM3,RAVER1,ICAM5	-1270,-7301,-51011
chrX:23761730-23763547	chrX	+	23762054	23763490	True	NM_001037171,NM_002970,NM_001033583	chrX,chrX,chrX	-,+,-	ACOT9,SAT1,ACOT9	-647,37784,-647
chr3:107242676-107243094	chr3	+	107242713	107243093	True	NM_001142568,NM_020235,NR_028303	chr3,chr3,chr3	+,+,-	BBX,BBX,LOC100302640	-981,-981,-283228
chr16:11351085-11352068	chr16	+	11351119	11351715	True	NM_003745,NM_152308	chr16,chr16	-,+	SOCS1,C16orf75	-1080,87595
chr12:50481187-50481899	chr12	+	50481260	50481938	True	NM_003076,NM_139071,NM_013277	chr12,chr12,chr12	+,+,-	SMARCD1,SMARCD1,RACGAP1	-2328,-2328,-61953
chr2:39455808-39456045	chr2	+	39455850	39455926	True	NR_037875,NM_001009565	chr2,chr2	+,-	LOC728730,CDKL4	208630,805
chr2:102772322-102774092	chr2	+	102772448	102774080	True	NM_000877,NM_032718	chr2,chr2	+,-	IL1R1,MFSD9	-2097,579314
chr17:45972164-45972977	chr17	+	45972272	45972874	True	NM_003110,NM_199262	chr17,chr17	+,-	SP2,SP6	641,-39032
chr20:36935304-36936392	chr20	+	36935817	36936405	True	NM_001725,NM_001029864	chr20,chr20	+,-	BPI,KIAA1755	-3316,-46643
chr7:132315429-132316917	chr7	+	132315565	132316726	True	NM_001037126,NM_181775	chr7,chr7	+,-	EXOC4,PLXNA4	621096,16772
chr12:109127664-109128314	chr12	+	109127667	109128356	True	NM_001917,NM_014325	chr12,chr12	+,-	DAO,CORO1C	145500,-2372
chr15:25493921-25494472	chr15	+	25494027	25494521	True	NR_003353,NR_003358,NM_130838,NR_003344,NR_003351,NR_003357,NR_003356,NR_003355,NR_003354,NR_003302,NR_003303,NR_003359	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,-,+,+,+,+,+,+,+,+,+	SNORD115-38,SNORD115-43,UBE3A,SNORD115-29,SNORD115-36,SNORD115-42,SNORD115-41,SNORD115-40,SNORD115-39,SNORD115-10,SNORD115-11,SNORD115-44	-9093,-35,156182,-35,-35,-1586,-3453,-5317,-7185,-1586,-35,1484
chr15:31284405-31284898	chr15	+	31284421	31284773	True	NM_017762,NM_014967	chr15,chr15	-,+	MTMR10,FAN1	-614,-88396
chr8:61589699-61590395	chr8	+	61590041	61590448	True	NR_034003,NM_017780	chr8,chr8	-,+	LOC100130298,CHD7	289917,890
chr1:145821382-145822698	chr1	+	145821487	145822708	True	NM_001097612,NM_001097613,NM_001097616,NR_036541	chr1,chr1,chr1,chr1	-,-,+,-	GPR89A,GPR89A,GPR89C,GPR89A	4446,4446,61159,4446
chr1:145821382-145822698	chr1	-	147404860	147405589	False	NR_003377,NM_016334	chr1,chr1	-,+	PDZK1P1,GPR89B	78799,-4406
chr9:34665564-34665863	chr9	+	34665612	34665836	True	NM_006664,NM_004512	chr9,chr9	-,+	CCL27,IL11RA	-2923,-11731
chr14:50774828-50776000	chr14	+	50775427	50775715	True	NR_033761,NM_024884,NM_001003805,NM_001003803,NM_015684	chr14,chr14,chr14,chr14,chr14	+,-,+,+,+	ATP5S,L2HGDH,ATP5S,ATP5S,ATP5S	3331,3282,3331,3331,3331
chr13:37246880-37247134	chr13	+	37246884	37247130	True	NM_001127217,NM_203451	chr13,chr13	-,+	SMAD9,C13orf36	247329,918
chr10:26224019-26225418	chr10	+	26224145	26225164	True	NM_017433,NR_027333	chr10,chr10	+,-	MYO3A,LOC100128811	-1194,-758940
chr1:33334876-33335669	chr1	+	33334880	33335190	True	NM_001171941,NM_001171940,NM_153756,NM_002143	chr1,chr1,chr1,chr1	-,-,-,+	FNDC5,FNDC5,FNDC5,HPCA	2942,1274,1274,16907
chr3:4535013-4535264	chr3	+	4535023	4535237	True	NM_001099952,NM_001168272,NM_002222,NM_182760	chr3,chr3,chr3,chr3	+,+,+,-	ITPR1,ITPR1,ITPR1,SUMF1	-42,-42,-42,-26057
chr16:2304027-2304833	chr16	+	2304054	2304136	True	NR_037448,NM_001178029,NM_001919	chr16,chr16,chr16	+,-,-	MIR3677,ECI1,ECI1	16577,-2452,-2452
chr19:52487049-52488979	chr19	+	52487747	52488918	True	NM_024840,NM_021632	chr19,chr19	+,-	ZNF613,ZNF350	-57110,1211
chr6:42124861-42125280	chr6	+	42124861	42125093	True	NM_001164446,NM_000409	chr6,chr6	-,+	C6orf132,GUCA1A	-14146,-1782
chr11:66743081-66743707	chr11	+	66743324	66743620	True	NM_001136485,NM_001040716	chr11,chr11	+,-	C11orf86,PC	-628,-17477
chr1:241520787-241521168	chr1	+	241520905	241521203	True	NM_002924,NM_003679	chr1,chr1	-,+	RGS7,KMO	-427,174476
chr17:60499255-60500121	chr17	+	60499515	60499887	True	NR_027486,NM_181725	chr17,chr17	-,+	TBC1D3P2,METTL2A	-146499,1358
chr16:403650-404113	chr16	+	403655	404073	True	NM_181050,NM_003502,NR_024453	chr16,chr16,chr16	-,-,+	AXIN1,AXIN1,LOC100134368	-979,-979,28167
chr15:91477713-91478083	chr15	+	91477715	91478035	True	NM_018671,NM_198527,NM_001039675	chr15,chr15,chr15	+,-,+	UNC45A,HDDC3,UNC45A	179,-1941,-4356
chr14:90532398-90534350	chr14	+	90532934	90534346	True	NM_022054,NM_145231	chr14,chr14	+,-	KCNK13,EFCAB11	-4889,-111845
chrX:150343982-150344230	chrX	+	150343992	150344218	True	NR_036256,NM_134446,NM_004224	chrX,chrX,chrX	+,-,+	MIR4330,CD99L2,GPR50	-7349,-276703,837
chr13:114899303-114900159	chr13	+	114899431	114900159	True	NM_001078645	chr13	+	CDC16	100202
chr11:118089101-118090399	chr11	+	118089108	118090442	True	NM_001098526,NM_153206,NM_000733	chr11,chr11,chr11	-,-,+	AMICA1,AMICA1,CD3E	5417,-5034,84852
chr19:41934886-41935151	chr19	+	41934924	41935184	True	NM_198540,NM_001130514	chr19,chr19	-,+	B3GNT8,C19orf69	-289,13878
chr12:79519658-79520131	chr12	+	79519708	79520018	True	NM_001135806,NM_002583	chr12,chr12	+,-	SYT1,PAWR	-80337,564832
chr3:10028525-10029015	chr3	+	10028524	10029043	True	NM_018447,NM_033084	chr3,chr3	-,+	TMEM111,FANCD2	-2,39069
chr1:120302536-120304108	chr1	+	120302544	120303611	True	NM_001166107,NM_006623,NM_005518	chr1,chr1,chr1	-,+,-	HMGCS2,PHGDH,HMGCS2	7995,-48176,7995
chr11:120205625-120206475	chr11	+	120205648	120206362	True	NM_001198665,NM_001198674,NM_001198675,NM_001198672,NM_001198673,NM_001198670,NM_001198671,NM_012101,NM_174926,NM_015313	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,+,+,-,+,+	ARHGEF12,TMEM136,TMEM136,TMEM136,TMEM136,TMEM136,TMEM136,TRIM29,TMEM136,ARHGEF12	1255,-9861,-9861,-9861,-9861,-9861,-9861,-196785,-9861,1255
chr17:80407588-80408013	chr17	+	80407587	80407869	True	NM_012336,NM_001193655,NM_001193654,NM_001193657,NM_031968,NM_001193653,NM_001083608,NM_001033046,NM_001100408,NR_036514,NR_036517,NR_036516,NR_036519,NR_036518,NM_001038618,NM_001100407	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,-,+,-,+,-,-,-,-,-,-,-,+,-	NARF,C17orf62,C17orf62,C17orf62,NARF,C17orf62,NARF,C17orf62,C17orf62,C17orf62,C17orf62,C17orf62,C17orf62,C17orf62,NARF,C17orf62	8670,15,892,892,8670,892,8670,892,892,892,892,892,892,892,8190,892
chr17:73999630-73999864	chr17	+	73999661	73999801	True	NM_001258,NM_001988	chr17,chr17	+,-	CDK3,EVPL	-2726,23756
chr19:52851457-52852916	chr19	+	52851720	52852640	True	NM_001102657,NM_173530	chr19,chr19	-,+	ZNF836,ZNF610	-176824,-3089
chr8:104420247-104422142	chr8	+	104420722	104422094	True	NM_030780,NM_015420	chr8,chr8	-,+	SLC25A32,DCAF13	5424,4847
chr12:53626244-53626445	chr12	+	53626280	53626490	True	NM_000966,NM_001170790	chr12,chr12	-,+	RARG,MFSD5	-244,18879
chr3:193926157-193927307	chr3	+	193926316	193927077	True	NR_024480,NM_005524	chr3,chr3	-,+	LOC100131551,HES1	103573,-72436
chr11:129686359-129686723	chr11	+	129686383	129686631	True	NM_138788,NM_006165	chr11,chr11	+,-	TMEM45B,NFRKB	-693,76329
chr11:129686359-129686723	chr9	+	33751342	33751566	False	NM_001197097,NR_023917,NM_007343,NM_001197098	chr9,chr9,chr9,chr9	+,-,+,+	PRSS3,PTENP1,PRSS3,PRSS3	-929,-73924,-929,-574
chr18:656434-656726	chr18	+	656468	656585	True	NM_001071,NM_001012716	chr18,chr18	+,-	TYMS,C18orf56	1018,1806
chr19:12903757-12904368	chr19	+	12903840	12904401	True	NM_002229,NM_005809,NM_181738	chr19,chr19,chr19	+,-,-	JUNB,PRDX2,PRDX2	-1591,8343,8343
chr2:86852025-86852344	chr2	+	86852029	86852324	True	NM_022780,NM_001198952,NM_001198951,NM_005667	chr2,chr2,chr2,chr2	+,-,-,-	RMND5A,RNF103,RNF103,RNF103	95089,-1029,-1029,-1029
chr8:103253841-103254724	chr8	+	103253987	103254773	True	NM_015713,NM_001172477,NM_001172478,NM_024410	chr8,chr8,chr8,chr8	-,-,-,+	RRM2B,RRM2B,RRM2B,ODF1	-2641,-2928,-2641,309074
chr11:118794760-118795108	chr11	+	118794861	118795151	True	NM_032966,NM_182557	chr11,chr11	+,-	CXCR5,BCL9L	-30811,-13248
chrX:147583359-147583992	chrX	+	147583427	147584047	True	NM_002025,NR_024503,NM_001169124,NM_001169125,NM_001169122,NM_001169123	chrX,chrX,chrX,chrX,chrX,chrX	+,-,+,+,+,+	AFF2,FMR1-AS1,AFF2,AFF2,AFF2,AFF2	-1347,-579751,-1347,-1347,-1347,-1347
chr2:55844611-55844853	chr2	+	55844619	55844859	True	NM_080667,NM_020463,NM_001122964	chr2,chr2,chr2	+,-,-	CCDC104,SMEK2,SMEK2	-97930,-13,-13
chr12:111474118-111474894	chr12	+	111474169	111474918	True	NM_000432,NM_015267	chr12,chr12	-,+	MYL2,CUX2	-115765,-2392
chr3:40429491-40429735	chr3	+	40429500	40429752	True	NM_001248,NR_033965	chr3,chr3	+,-	ENTPD3,FLJ33065	-878,-78311
chr8:134201621-134203302	chr8	+	134201691	134203259	True	NR_037944,NM_003882,NM_001045557,NM_001204870,NM_080838,NM_001204869	chr8,chr8,chr8,chr8,chr8,chr8	+,+,-,+,+,+	WISP1,WISP1,SLA,WISP1,WISP1,WISP1	22,22,-86381,22,22,22
chr2:190585265-190585804	chr2	+	190585440	190585635	True	NM_144708,NM_022353	chr2,chr2	+,-	ANKAR,OSGEPL1	-44792,42350
chr18:14128894-14129768	chr18	+	14129201	14129787	True	NR_033354,NR_026756,NM_145287	chr18,chr18,chr18	-,+,-	ZNF519,LOC284233,ZNF519	2752,207634,2752
chr5:87972062-87973739	chr5	+	87972246	87973751	True	NR_024383,NR_030741,NR_015436,NM_022650,NR_024384	chr5,chr5,chr5,chr5,chr5	-,-,-,+,-	LOC645323,MIR9-2,LOC645323,RASA1,LOC645323	562,-9489,6920,-1407531,-3100
chr9:131798242-131798889	chr9	+	131798292	131798816	True	NM_020145,NM_032809	chr9,chr9	-,+	SH3GLB2,FAM73B	-7713,436
chr7:45151389-45152005	chr7	+	45151415	45151823	True	NM_030900,NM_199122,NR_002990,NR_002919,NR_002991,NM_004749,NM_005856	chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,-,+	TBRG4,TBRG4,SNORA5B,SNORA5A,SNORA5C,TBRG4,RAMP3	-98,-98,-5717,-7334,-6774,-98,45543
chr7:89783199-89783433	chr7	+	89783301	89783477	True	NM_012449,NM_152706	chr7,chr7	+,-	STEAP1,C7orf62	211,-1358270
chr7:89783199-89783433	chr7	-	22540229	22540288	False	NM_001164460,NM_207342,NM_000600	chr7,chr7,chr7	-,-,+	MGC87042,MGC87042,IL6	-328,-328,226477
chr4:103423226-103423621	chr4	+	103423329	103423625	True	NM_003998,NM_001165412,NM_001135146	chr4,chr4,chr4	+,+,-	NFKB1,NFKB1,SLC39A8	-894,-894,-156674
chr10:99400973-99401178	chr10	+	99401018	99401182	True	NM_018425,NM_178832,NM_001098831	chr10,chr10,chr10	+,-,-	PI4K2A,MORN4,MORN4	-626,-7674,-7105
chr3:53081275-53082358	chr3	+	53081414	53082179	True	NM_016329,NM_006254,NM_001005158,NM_001005159	chr3,chr3,chr3,chr3	-,+,-,-	SFMBT1,PRKCD,SFMBT1,SFMBT1	-1325,113043,-1325,-2079
chr9:79518797-79520210	chr9	+	79518987	79520206	True	NM_001013735,NM_015225	chr9,chr9	+,-	FOXB2,PRUNE2	114364,848
chr1:25961165-25962448	chr1	+	25961460	25962442	True	NM_020379,NR_024498	chr1,chr1	+,-	MAN1C1,LOC646471	-17563,187711
chr12:55635811-55636166	chr12	+	55635840	55636204	True	NM_001005493,NM_001005490	chr12,chr12	-,+	OR6C6,OR6C74	52862,4867
chr13:47471476-47472062	chr13	+	47471542	47472110	True	NM_001164213,NM_000621,NM_001165947	chr13,chr13,chr13	+,-,-	LRCH1,HTR2A,HTR2A	-344297,-373,-373
chr1:16845412-16846917	chr1	+	16845689	16846947	True	NR_023386,NR_037446	chr1,chr1	-,+	CROCCP3,MIR3675	-26493,28461
chr7:20044162-20044768	chr7	+	20044177	20044808	True	NM_182762,NM_002214	chr7,chr7	-,+	MACC1,ITGB8	212268,325916
chr3:40352421-40353555	chr3	+	40352431	40353592	True	NM_005875,NR_033965	chr3,chr3	+,-	EIF1B,FLJ33065	-1311,-1242
chr3:196363867-196365632	chr3	+	196364354	196365680	True	NM_198565,NM_182627	chr3,chr3	+,-	LRRC33,WDR53	975,-68941
chr19:49536442-49536746	chr19	+	49536517	49536621	True	NR_024244,NM_033378,NM_033377,NR_004383,NM_000737	chr19,chr19,chr19,chr19,chr19	-,+,-,+,-	SNAR-G2,CGB2,CGB1,SNAR-G1,CGB	-1473,-1438,3620,3655,-8924
chr19:49536442-49536746	chr19	-	49538699	49538751	False	NR_004383,NM_033378,NM_033377,NR_024244,NM_033043	chr19,chr19,chr19,chr19,chr19	+,+,-,-,+	SNAR-G1,CGB2,CGB1,SNAR-G2,CGB5	1525,-3620,1490,-3655,8350
chr19:49536442-49536746	chr19	-	49557456	49557508	False	NM_033183,NM_006179,NM_033043,NM_033142	chr19,chr19,chr19,chr19	-,-,+,-	CGB8,NTF4,CGB5,CGB7	-5088,9668,-10407,1541
chr19:49536442-49536746	chr19	+	49548620	49548680	False	NR_004383,NM_033183,NM_033377,NM_033043	chr19,chr19,chr19,chr19	+,-,-,+	SNAR-G1,CGB8,CGB1,CGB5	-8401,3744,-8429,-1576
chr19:49536442-49536746	chr19	-	49550766	49550869	False	NM_033183,NM_033142,NM_033043	chr19,chr19,chr19	-,-,+	CGB8,CGB7,CGB5	1568,8197,-3715
chr1:156336896-156337903	chr1	+	156336940	156337788	True	NR_036565,NM_020407,NR_026549	chr1,chr1,chr1	-,+,+	CCT3,RHBG,RHBG	-28734,1214,1214
chr10:104264301-104264963	chr10	+	104264500	104264960	True	NM_001178133,NM_005736,NM_016169	chr10,chr10,chr10	+,-,+	SUFU,ACTR1A,SUFU	-832,-1988,-832
chr6:109407477-109408056	chr6	+	109407565	109407898	True	NM_014454,NM_001083535	chr6,chr6	-,+	SESN1,CEP57L1	7871,8457
chr1:154975341-154975572	chr1	+	154975451	154975621	True	NM_015872,NM_018655,NM_003029	chr1,chr1,chr1	+,+,-	ZBTB7B,LENEP,SHC1	-390,-9440,-28492
chr4:75719147-75719517	chr4	+	75719185	75719347	True	NM_001729,NM_015393	chr4,chr4	-,+	BTC,PARM1	585,138937
chr6:154679939-154680429	chr6	+	154680263	154680475	True	NM_015553,NM_001130700,NM_001145287	chr6,chr6,chr6	-,-,+	IPCEF1,IPCEF1,OPRM1	-2363,-2363,-272672
chr1:27340501-27342297	chr1	+	27340528	27341825	True	NM_052943,NM_001013642	chr1,chr1	-,+	FAM46B,TRNP1	-1195,-20384
chr13:49955172-49955435	chr13	+	49955389	49955496	True	NM_031915,NM_030925	chr13,chr13	+,-	SETDB2,CAB39L	62932,20302
chr19:29407569-29408733	chr19	+	29407568	29408612	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	47425,295574
chr10:100994439-100995486	chr10	+	100994562	100995379	True	NM_021828,NM_001166246,NM_020348,NM_001166244,NM_001166245	chr10,chr10,chr10,chr10,chr10	-,-,+,-,-	HPSE2,HPSE2,CNNM1,HPSE2,HPSE2	303,303,93476,303,303
chr3:172474832-172475738	chr3	+	172474846	172475552	True	NM_018098,NM_020792	chr3,chr3	+,-	ECT2,NCEH1	-2608,-45838
chr4:25930634-25931176	chr4	+	25930642	25931162	True	NM_001145432,NM_015187	chr4,chr4	+,-	C4orf52,SEL1L3	-14880,-66032
chr21:38747918-38749580	chr21	+	38748166	38749081	True	NM_101395,NM_006052	chr21,chr21	+,-	DYRK1A,DSCR3	-8365,-108333
chr1:16092491-16093130	chr1	+	16092490	16092598	True	NM_001024215,NM_001024216,NM_001089591,NM_017556	chr1,chr1,chr1,chr1	+,+,-,+	FBLIM1,FBLIM1,UQCRHL,FBLIM1	-1547,-1082,41646,-7286
chr12:106995011-106995330	chr12	+	106995199	106995379	True	NM_006825,NM_002920	chr12,chr12	-,+	CKAP4,RFX4	-353486,-300
chr20:58557857-58558146	chr20	+	58557859	58558135	True	NM_021810,NM_006242	chr20,chr20	+,-	CDH26,PPP1R3D	13281,-42507
chr2:62894808-62896541	chr2	+	62894915	62896499	True	NM_198276,NM_001142615	chr2,chr2	-,+	TMEM17,EHBP1	-161311,4486
chr2:174824991-174825558	chr2	+	174825017	174825422	True	NM_003111,NM_001145250,NM_001017371,NM_001172712	chr2,chr2,chr2,chr2	-,+,-,-	SP3,SP9,SP3,SP3	5065,374398,3582,5065
chr2:145086456-145086781	chr2	+	145086456	145086525	True	NR_033870,NM_001164629	chr2,chr2	+,-	DKFZp686O1327,GTDC1	339008,3611
chr10:73849470-73851330	chr10	+	73849558	73851050	True	NM_173473,NM_001134434,NM_004273,NM_014767	chr10,chr10,chr10,chr10	+,-,+,-	ANAPC16,SPOCK2,CHST3,SPOCK2	124755,-768,-125489,-768
chr5:177208258-177208810	chr5	+	177208601	177208699	True	NR_003615,NM_173663	chr5,chr5	+,-	LOC728554,FAM153A	93562,-1096
chr5:177208258-177208810	chr5	-	175489523	175489621	False	NM_032361,NM_001079529	chr5,chr5	-,+	THOC3,FAM153B	-93978,22287
chr5:177208258-177208810	chr5	-	177435139	177435237	False	NM_006261,NM_001079527	chr5,chr5	-,+	PROP1,FAM153C	-11896,451
chr16:29988077-29988575	chr16	+	29988154	29988556	True	NM_004783,NM_016151,NM_003609	chr16,chr16,chr16	+,+,-	TAOK2,TAOK2,HIRIP3	-2983,-2983,18906
chr1:169782999-169784328	chr1	+	169783018	169784087	True	NM_018186,NM_033418	chr1,chr1	+,-	C1orf112,METTL18	-18519,-18987
chr1:92104309-92104948	chr1	+	92104529	92104755	True	NM_001017975,NR_003130	chr1,chr1	-,+	HFM1,HSP90B3P	-234103,-4017
chr22:25369221-25369456	chr22	+	25369278	25369358	True	NM_001145206,NM_001001663	chr22,chr22	+,-	KIAA1671,TMEM211	54582,-33964
chr2:70476143-70476619	chr2	+	70476159	70476624	True	NM_016297,NM_022173,NM_022037	chr2,chr2,chr2	+,-,-	PCYOX1,TIA1,TIA1	8606,-380,-380
chr10:81322302-81324102	chr10	+	81322703	81323858	True	NM_001093770,NM_001098668	chr10,chr10	+,-	SFTPA1,SFTPA2	46836,-2540
chr9:129675828-129676510	chr9	+	129676109	129676450	True	NM_001190729,NM_001190730,NM_012098,NM_014636	chr9,chr9,chr9,chr9	+,+,-,+	RALGPS1,RALGPS1,ANGPTL2,RALGPS1	602,602,208653,602
chr5:141257422-141257727	chr5	+	141257486	141257624	True	NM_001142603,NM_032420,NM_002587	chr5,chr5,chr5	+,-,-	KIAA0141,PCDH1,PCDH1	45760,370,370
chr19:14531159-14531552	chr19	+	14531226	14531316	True	NM_001204057,NM_005804,NM_002741	chr19,chr19,chr19	-,-,+	DDX39A,DDX39A,PKN1	-1320,-1031,12849
chr7:127224978-127225335	chr7	+	127225035	127225361	True	NM_024523,NM_020369,NM_001662	chr7,chr7,chr7	-,+,+	GCC1,FSCN3,ARF5	343,8327,3044
chrX:133591695-133592131	chrX	+	133591695	133591891	True	NM_000194,NR_030587	chrX,chrX	+,-	HPRT1,MIR450B	2283,82459
chr15:89089393-89089613	chr15	+	89089448	89089572	True	NM_001144074,NR_031590,NR_026645,NM_017996	chr15,chr15,chr15,chr15	-,+,-,-	DET1,MIR1179,DET1,DET1	390,61765,390,390
chr1:158899083-158900120	chr1	+	158899083	158900104	True	NM_004833,NM_152501,NM_198930,NM_198928,NM_198929	chr1,chr1,chr1,chr1,chr1	-,+,+,+,+	AIM2,PYHIN1,PYHIN1,PYHIN1,PYHIN1	146594,1237,1237,1237,1237
chr8:1712572-1713385	chr8	+	1713043	1713399	True	NR_033895,NM_018941	chr8,chr8	-,+	LOC286083,CLN8	-462216,-1233
chr12:32911581-32912589	chr12	+	32911753	32912607	True	NM_001040436,NM_012063	chr12,chr12	-,+	YARS2,DNM1L	-2866,-79667
chr1:48343518-48344699	chr1	+	48344020	48344413	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	118206,343943
chrX:70932096-70932393	chrX	+	70932200	70932380	True	NR_034005,NM_001145140,NM_001145139	chrX,chrX,chrX	+,-,-	FLJ46446,CXorf49,CXorf49B	-15205,5805,5805
chrX:70932096-70932393	chrX	-	70988894	70989074	False	NR_001568,NM_001145140,NM_001145139	chrX,chrX,chrX	-,+,+	BCYRN1,CXorf49,CXorf49B	-39932,-5805,-5805
chr1:150337387-150337943	chr1	+	150337618	150337968	True	NM_016022,NM_015203	chr1,chr1	-,+	APH1A,RPRD2	-96086,-679
chr1:160092964-160093225	chr1	+	160093003	160093253	True	NM_052868,NM_000702	chr1,chr1	-,+	IGSF8,ATP1A2	-24595,-7534
chr5:173163338-173163632	chr5	+	173163367	173163681	True	NM_030627,NM_138369	chr5,chr5	+,-	CPEB4,BOD1	151649,-119701
chr11:46401086-46401391	chr11	+	46401090	46401440	True	NM_001012333,NM_002391,NM_001012334,NM_000741	chr11,chr11,chr11,chr11	+,+,+,-	MDK,MDK,MDK,CHRM4	1862,1778,1177,6717
chr7:72848424-72848669	chr7	+	72848470	72848680	True	NM_003508,NM_032408	chr7,chr7	+,-	FZD9,BAZ1B	-412,87985
chr14:105532844-105533147	chr14	+	105532911	105533067	True	NM_174891,NM_013345	chr14,chr14	+,-	C14orf79,GPR132	-80346,-1157
chr7:6147333-6147641	chr7	+	6147419	6147495	True	NM_032172,NM_014413	chr7,chr7	+,-	USP42,EIF2AK1	-2925,-48559
chr6:14752204-14754091	chr6	+	14752292	14753554	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	492972,909785
chr21:34148219-34148853	chr21	+	34148333	34148869	True	NM_013329,NR_027873,NM_016631,NR_024622,NR_024623	chr21,chr21,chr21,chr21,chr21	-,-,-,+,+	GCFC1,GCFC1,GCFC1,C21orf49,C21orf49	-4164,-4164,-4164,-3973,-3973
chr4:118006798-118007193	chr4	+	118006802	118007232	True	NM_152402,NR_031737	chr4,chr4	-,+	TRAM1L1,MIR1973	-66,-785972
chr5:68615870-68617754	chr5	+	68616049	68617635	True	NM_176816,NM_133343	chr5,chr5	-,+	CCDC125,RAD17	71,47488
chr17:42265237-42266238	chr17	+	42265306	42266234	True	NM_024107,NM_001098833,NM_178542,NM_001076674,NM_020218,NM_177441	chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,+,-,+	TMUB2,ATXN7L3,C17orf65,TMUB2,ATXN7L3,TMUB2	-1011,9345,-1224,-1011,9345,-791
chr19:29376676-29377811	chr19	+	29376868	29377840	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	78197,326347
chr2:132184520-132186298	chr2	+	132184562	132186217	True	NR_002826,NR_036499	chr2,chr2	-,+	LOC401010,LOC389043	16300,-24139
chr10:128208486-128208835	chr10	+	128208486	128208874	True	NM_001004298,NM_001380	chr10,chr10	-,+	C10orf90,DOCK1	1186,385148
chr8:86157413-86157639	chr8	+	86157421	86157639	True	NM_001099673,NM_198584	chr8,chr8	-,+	C8orf59,CA13	-24778,76
chr10:72576002-72576247	chr10	+	72576024	72576268	True	NM_003901,NM_152710	chr10,chr10	+,-	SGPL1,C10orf27	-371,-30867
chr5:57921538-57923214	chr5	+	57921694	57923063	True	NM_006622,NM_138453	chr5,chr5	-,+	PLK2,RAB3C	-165781,-42811
chr2:176956897-176957255	chr2	+	176956896	176957126	True	NM_001080458,NM_021193,NM_000523	chr2,chr2,chr2	-,+,+	EVX2,HOXD12,HOXD13	-8206,7403,405
chr1:47696890-47697656	chr1	+	47696902	47697610	True	NM_001010969,NM_003189	chr1,chr1	+,-	CYP4A22,TAL1	-93846,-1459
chr19:36202781-36203510	chr19	+	36202974	36203090	True	NM_014727,NM_024660,NM_014383	chr19,chr19,chr19	+,-,+	MLL4,IGFLR1,ZBTB32	5830,30311,739
chr8:49836228-49837006	chr8	+	49836362	49836903	True	NM_003068,NM_001007176	chr8,chr8	-,+	SNAI2,C8orf22	-2363,147999
chr10:15088624-15089549	chr10	+	15088772	15089418	True	NM_001039844,NM_018324,NM_001039702	chr10,chr10,chr10	-,+,+	ACBD7,OLAH,OLAH	41407,-2933,-2933
chr4:24322429-24322781	chr4	+	24322466	24322823	True	NR_030299,NM_003102	chr4,chr4	-,+	MIR573,SOD3	199141,474261
chr7:149474053-149474378	chr7	+	149474161	149474359	True	NM_207336,NM_198455	chr7,chr7	-,+	ZNF467,SSPO	-3866,-1081
chr7:128370096-128371011	chr7	+	128370333	128371062	True	NM_001219,NM_001199674,NM_001199671,NM_001199673,NM_001199672,NM_001708,NM_001130674	chr7,chr7,chr7,chr7,chr7,chr7,chr7	+,+,+,+,+,-,+	CALU,CALU,CALU,CALU,CALU,OPN1SW,CALU	8283,8283,8283,8283,8283,44836,8283
chr12:120763160-120763623	chr12	+	120763293	120763485	True	NM_000928,NM_012240	chr12,chr12	-,+	PLA2G1B,SIRT4	2157,-23227
chr6:31105986-31107562	chr6_qbl_hap6	+	2402439	2402499	False	NM_014069,NM_001077511	chr6_qbl_hap6,chr6_qbl_hap6	-,+	PSORS1C2,TCF19	523,19654
chr6:31105986-31107562	chr6_mcf_hap5	+	2488539	2488599	False	NM_014069,NM_001077511	chr6_mcf_hap5,chr6_mcf_hap5	-,+	PSORS1C2,TCF19	523,19660
chr6:31105986-31107562	chr6_mann_hap4	+	2454962	2455022	False	NM_014069,NM_001077511	chr6_mann_hap4,chr6_mann_hap4	-,+	PSORS1C2,TCF19	523,19658
chr6:31105986-31107562	chr6	+	31106594	31106654	True	NM_014069,NM_001077511	chr6,chr6	-,+	PSORS1C2,TCF19	523,19648
chr11:58948299-58949461	chr11	+	58948448	58949440	True	NM_001039396,NM_015177	chr11,chr11	-,+	MPEG1,DTX4	31104,-8695
chr16:20497977-20499504	chr16	+	20497976	20499553	True	NM_174924,NM_001010845	chr16,chr16	-,+	PDILT,ACSM2A	-81943,-35168
chr10:118115764-118116833	chr10	+	118115948	118116562	True	NM_005264,NM_198515	chr10,chr10	-,+	GFRA1,C10orf96	-82822,-32060
chr20:31801289-31803132	chr20	+	31801581	31803050	True	NM_001042439,NM_178466,NM_016082	chr20,chr20,chr20	+,+,-	C20orf71,C20orf71,CDK5RAP1	2084,2084,186338
chr2:238768847-238769305	chr2	+	238768850	238769287	True	NM_005855,NR_033308	chr2,chr2	+,-	RAMP1,RAB17	-714,-269081
chr13:76044598-76045598	chr13	+	76044614	76045608	True	NM_014832,NM_006002	chr13,chr13	-,+	TBC1D4,UCHL3	10694,78318
chr16:79818037-79818319	chr16	+	79818112	79818286	True	NM_005360,NM_130897	chr16,chr16	-,+	MAF,DYNLRB2	-183490,756567
chr6:127441107-127441668	chr6	+	127441134	127441404	True	NM_032784,NM_001139510	chr6,chr6	+,-	RSPO3,ECHDC1	-1137,222198
chr8:26718909-26720899	chr8	+	26719040	26720485	True	NM_033302,NM_033303,NM_000680,NM_033304,NM_001386	chr8,chr8,chr8,chr8,chr8	-,-,-,-,+	ADRA1A,ADRA1A,ADRA1A,ADRA1A,DPYSL2	2488,2488,2488,2488,-283671
chr3:15632442-15632957	chr3	+	15632592	15632911	True	NM_000060,NM_012260	chr3,chr3	+,-	BTD,HACL1	10343,10278
chr1:173554825-173556004	chr1	+	173555207	173555652	True	NM_001195190,NM_178527	chr1,chr1	+,-	LOC730159,SLC9A11	49008,16632
chr9:46292039-46292399	chr9	+	46292102	46292188	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2661372,395377
chr4:159085020-159085562	chr4	+	159085103	159085499	True	NM_001128424,NM_016613,NM_001031700,NM_018342	chr4,chr4,chr4,chr4	-,-,-,+	FAM198B,FAM198B,FAM198B,TMEM144	8753,8269,8753,45901
chr2:742156-742463	chr2	+	742163	742427	True	NM_018968,NM_152834	chr2,chr2	+,-	SNTG2,TMEM18	204126,-64724
chrX:150730046-150730325	chrX	+	150730118	150730186	True	NR_029973,NM_173493	chrX,chrX	-,+	MIR452,PASD1	398048,1820
chr11:8282429-8283822	chr11	+	8282475	8283803	True	NM_002315,NM_177972	chr11,chr11	-,+	LMO1,TUB	1653,-179617
chr13:53308399-53309391	chr13	+	53308438	53309378	True	NR_031582,NM_007015,NM_001011705	chr13,chr13,chr13	+,-,-	MIR759,LECT1,LECT1	74806,4619,4619
chr5:53608052-53609372	chr5	+	53608301	53609277	True	NM_006308,NM_019087	chr5,chr5	+,-	HSPB3,ARL15	142153,-1898
chr17:42578707-42579220	chr17	+	42578855	42579234	True	NM_001466,NM_001002909,NR_036474	chr17,chr17,chr17	+,-,-	FZD2,GPATCH8,GPATCH8	55577,1778,1778
chr12:53493765-53494931	chr12	+	53494332	53494958	True	NM_002178,NM_003578,NM_032840	chr12,chr12,chr12	+,+,-	IGFBP6,SOAT2,SPRYD3	-2954,2315,-21128
chr15:44583091-44584553	chr15	+	44583357	44584364	True	NM_032892,NM_177974,NM_138423	chr15,chr15,chr15	-,+,+	FRMD5,CASC4,CASC4	-95928,-2499,-2499
chr16:8349114-8350792	chr16	+	8349362	8350800	True	NM_001146336,NM_024109	chr16,chr16	-,+	TMEM114,METTL22	271476,364726
chr3:98452219-98452509	chr3	+	98452234	98452544	True	NM_006100,NM_000097	chr3,chr3	+,-	ST3GAL6,CPOX	-713,-139779
chr16:58060313-58060706	chr16	+	58060371	58060635	True	NM_020807,NM_002428	chr16,chr16	-,+	ZNF319,MMP15	-26609,-1140
chr22:27012176-27013060	chr22	+	27012266	27012946	True	NM_001886,NM_001887	chr22,chr22	+,-	CRYBA4,CRYBB1	4981,1095
chr3:179039579-179040675	chr3	+	179039624	179040604	True	NM_016331,NM_171828	chr3,chr3	+,-	ZNF639,KCNMB3	946,-54786
chr1:206785820-206786172	chr1	+	206786006	206786178	True	NM_006893,NM_001201478,NM_001004023	chr1,chr1,chr1	-,-,+	EIF2D,EIF2D,DYRK3	-102,-102,22702
chr15:90070541-90071775	chr15	+	90070612	90071645	True	NR_027074,NR_027075,NR_027076,NR_027077,NM_152259	chr15,chr15,chr15,chr15,chr15	-,-,-,-,+	LOC283761,LOC283761,LOC283761,LOC283761,C15orf42	-3347,-3347,-3347,-3347,47172
chrX:103810868-103811086	chrX	+	103810887	103811111	True	NM_153448,NM_017416	chrX,chrX	-,+	ESX1,IL1RAPL2	-311288,50
chr3:68981495-68981734	chr3	+	68981527	68981731	True	NM_006407,NM_001005527,NM_182522	chr3,chr3,chr3	+,-,-	ARL6IP5,FAM19A4,FAM19A4	152358,30,30
chr19:12946419-12946668	chr19	+	12946453	12946539	True	NM_001080997,NM_014975,NM_031429	chr19,chr19,chr19	-,+,-	RTBDN,MAST1,RTBDN	-5246,2719,-223
chr18:20716698-20716898	chr18	+	20716760	20716926	True	NM_001100619,NR_023359,NM_032933	chr18,chr18,chr18	+,+,-	CABLES1,CABLES1,C18orf45	-1084,-2283,301049
chr19:30156792-30157332	chr19	+	30156888	30157334	True	NM_001031726,NM_024310	chr19,chr19	-,+	C19orf12,PLEKHF1	48679,-612
chr6:389868-390683	chr6	+	389869	390527	True	NM_148959,NM_002460,NM_001195286,NR_036585	chr6,chr6,chr6,chr6	-,+,+,+	HUS1B,IRF4,IRF4,IRF4	266487,1211,1211,1211
chr8:144816472-144817394	chr8	+	144816756	144817284	True	NR_033849,NM_198488	chr8,chr8	+,-	LOC100128338,FAM83H	-497,-842
chr9:127174511-127175267	chr9	+	127174615	127175291	True	NM_002799,NM_001161808	chr9,chr9	-,+	PSMB7,GPR144	2480,38131
chr15:24802631-24803112	chr15	+	24802639	24802961	True	NR_026646,NR_026647	chr15,chr15	+,-	PWRN1,PWRN2	342,-387586
chr15:24802631-24803112	chr15	+	24588044	24588106	False	NR_026646,NR_026647	chr15,chr15	+,-	PWRN1,PWRN2	215197,-172991
chr11:117700480-117700817	chr11	+	117700484	117700616	True	NM_001680,NM_001558,NM_021603	chr11,chr11,chr11	-,+,-	FXYD2,IL10RA,FXYD2	-5025,156489,-1677
chr12:18237833-18239734	chr12	+	18238325	18239763	True	NM_004570,NM_024730	chr12,chr12	+,-	PIK3C2G,RERGL	174710,3401
chr10:46080271-46081887	chr10	+	46080314	46081918	True	NM_001002265,NM_145021,NM_001169106	chr10,chr10,chr10	-,-,+	MARCH8,MARCH8,FAM21C	8495,8495,140729
chr1:70879240-70879708	chr1	+	70879249	70879359	True	NM_001190463,NM_153742,NM_030816,NM_001902	chr1,chr1,chr1,chr1	+,+,-,+	CTH,CTH,ANKRD13C,CTH	-2406,-2406,-58832,-2406
chr2:119727711-119728243	chr2	+	119727727	119728053	True	NM_001426,NM_006770	chr2,chr2	-,+	EN1,MARCO	-121968,-28033
chr2:240118655-240119045	chr2	+	240118741	240119071	True	NR_036229,NR_026664	chr2,chr2	+,-	MIR4269,MGC16025	108085,-1588
chr12:93824857-93825862	chr12	+	93825057	93825731	True	NM_003348,NM_014050	chr12,chr12	-,+	UBE2N,MRPL42	10345,35538
chr11:15095172-15095527	chr11	+	15095228	15095570	True	NM_001741,NM_000728	chr11,chr11	-,+	CALCA,CALCB	-101396,-133
chr16:75591651-75592580	chr16	+	75591970	75592321	True	NM_001077418,NM_001077419,NM_001077416,NM_007285	chr16,chr16,chr16,chr16	-,-,-,+	TMEM231,TMEM231,TMEM231,GABARAPL2	-1800,-1800,-1834,7927
chr6:2897554-2898771	chr6	+	2897971	2898691	True	NR_026855,NM_004155	chr6,chr6	+,-	DKFZP686I15217,SERPINB9	89509,4904
chr6:160912408-160913962	chr6	+	160912514	160913970	True	NR_028093,NM_021977	chr6,chr6	-,+	LPAL2,SLC22A3	18236,-143140
chr5:132037113-132037832	chr5	+	132037294	132037860	True	NM_007054,NM_172348	chr5,chr5	-,+	KIF3A,IL4	35455,-27981
chr12:53225447-53227335	chr12	+	53225564	53227315	True	NM_199187,NM_175834	chr12,chr12	+,-	KRT18,KRT79	115339,812
chr12:123190210-123190477	chr12	+	123190320	123190476	True	NM_003677,NM_177551	chr12,chr12	+,-	DENR,GPR109A	46894,-2416
chr12:123190210-123190477	chr12	+	123203850	123203900	False	NM_006018,NM_003677	chr12,chr12	-,+	GPR109B,DENR	-2411,33470
chr17:20367817-20368390	chr17	+	20367821	20368347	True	NM_001190790,NM_001042685	chr17,chr17	+,-	CDRT15L2,LGALS9B	114689,2551
chr17:20367817-20368390	chr17	-	18382603	18383057	False	NR_003554,NM_001040078	chr17,chr17	-,+	LOC220594,LGALS9C	41559,-2555
chr19:10420194-10420406	chr19	+	10420240	10420358	True	NM_001031734,NM_001103167,NM_003259	chr19,chr19,chr19	-,-,+	FDX1L,ZGLP1,ICAM5	6383,-7,-19636
chr19:16650723-16650997	chr19	+	16650783	16650867	True	NM_006387,NM_032207	chr19,chr19	-,+	CHERP,C19orf44	2446,-43634
chr2:201813818-201814775	chr2	+	201814016	201814780	True	NR_033915,NM_001142356	chr2,chr2	-,+	ORC2,NIF3L1	13695,-57441
chr16:11763139-11763517	chr16	+	11763274	11763549	True	NM_003498,NM_015914	chr16,chr16	+,-	SNN,TXNDC11	-1036,73150
chr3:42546231-42546496	chr3	+	42546265	42546361	True	NM_004624,NM_001201584	chr3,chr3	+,-	VIPR1,SEC22C	-2215,77209
chr14:105392636-105393142	chr14	+	105392983	105393127	True	NM_138420,NM_138790	chr14,chr14	-,+	AHNAK2,PLD4	51617,-1847
chr16:29674634-29674957	chr16	+	29674679	29674946	True	NR_002593,NM_003123,NM_001030288	chr16,chr16,chr16	-,+,+	SLC7A5P1,SPN,SPN	-49641,-150,-430
chr22:39641933-39642983	chr22	+	39641950	39642991	True	NM_145731,NM_002608,NM_033016	chr22,chr22,chr22	+,-,-	SYNGR1,PDGFB,PDGFB	102962,-993,-5036
chr8:103423053-103423707	chr8	+	103423073	103423545	True	NM_024410,NM_015902	chr8,chr8	+,-	ODF1,UBR5	140302,1422
chr6:32099277-32099580	chr6_mcf_hap5	+	3479246	3479392	False	NM_001136153,NM_138717,NM_022110,NM_004381	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	-,+,-,-	ATF6B,PPT2,FKBPL,ATF6B	-3401,21659,-1351,-3401
chr6:32099277-32099580	chr6_dbb_hap3	+	3378592	3378738	False	NM_001136153,NM_138717,NM_022110,NM_004381	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	-,+,-,-	ATF6B,PPT2,FKBPL,ATF6B	-3403,21663,-1353,-3403
chr6:32099277-32099580	chr6	+	32099419	32099565	True	NM_001136153,NM_138717,NM_022110,NM_004381	chr6,chr6,chr6,chr6	-,+,-,-	ATF6B,PPT2,FKBPL,ATF6B	-3402,21663,-1352,-3402
chr6:32099277-32099580	chr6_ssto_hap7	+	3447147	3447293	False	NM_030651,NM_138717	chr6_ssto_hap7,chr6_ssto_hap7	-,+	PRRT1,PPT2	20202,21660
chr6:32099277-32099580	chr6_cox_hap2	+	3570082	3570228	False	NM_001136153,NM_138717,NM_022110,NM_004381	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	-,+,-,-	ATF6B,PPT2,FKBPL,ATF6B	-3405,21668,-1355,-3405
chr15:75107890-75108410	chr15	+	75107978	75108410	True	NM_021819,NM_001099436	chr15,chr15	+,-	LMAN1L,ULK3	-2835,27192
chr20:45607340-45608377	chr20	+	45607425	45608400	True	NM_172110,NM_033550	chr20,chr20	+,-	EYA2,TP53RK	-84213,-289149
chr17:61775927-61776369	chr17	+	61775932	61776236	True	NM_007372,NM_030576	chr17,chr17	+,-	DDX42,LIMD2	75330,1333
chr22:24111461-24111942	chr22	+	24111460	24111942	True	NM_213720,NM_005940,NM_182520	chr22,chr22,chr22	-,+,+	CHCHD10,MMP11,C22orf15	-1319,3093,-6303
chr7:99814580-99815180	chr7	+	99814676	99815110	True	NM_024070,NM_152742	chr7,chr7	+,-	PVRIG,GPC2	1760,-39686
chr18:2571540-2572408	chr18	+	2571597	2572422	True	NM_006101,NM_022840	chr18,chr18	+,-	NDC80,METTL4	-138,-108
chr19:55549158-55549720	chr19	+	55549306	55549769	True	NM_001083899,NM_133180,NM_016363	chr19,chr19,chr19	-,+,-	GP6,EPS8L1,GP6	-87,37451,-87
chr2:70141009-70141269	chr2	+	70141167	70141273	True	NM_001202513,NM_001202514,NM_002357,NM_152792	chr2,chr2,chr2,chr2	+,+,+,-	MXD1,MXD1,MXD1,ASPRV1	899,899,899,48176
chr1:155896279-155896616	chr1	+	155896509	155896636	True	NM_014949,NR_002974,NM_181885,NR_003005	chr1,chr1,chr1,chr1	-,-,+,-	KIAA0907,SNORA42,RXFP4,SCARNA4	7609,-6676,14843,-632
chr19:34290116-34291414	chr19	+	34290123	34291325	True	NM_001129995,NM_001129994,NM_001166057,NM_024076	chr19,chr19,chr19,chr19	+,+,-,+	KCTD15,KCTD15,PEPD,KCTD15	-2431,-2431,-277324,-2431
chr14:23481204-23481699	chr14	+	23481257	23481376	True	NM_001130706,NM_021944,NM_001130708,NM_001099780	chr14,chr14,chr14,chr14	-,-,-,+	C14orf93,C14orf93,C14orf93,PSMB11	-1897,-1897,-1897,29999
chr3:48671440-48672405	chr3	+	48671659	48672371	True	NM_001040454,NM_134263,NM_033629,NM_022911,NM_134426	chr3,chr3,chr3,chr3,chr3	-,-,+,-,-	SLC26A6,SLC26A6,TREX1,SLC26A6,SLC26A6	-380,605,-164481,605,605
chr17:48586164-48586426	chr17	+	48586365	48586475	True	NM_032133,NM_001267	chr17,chr17	+,-	MYCBPAP,CHAD	-671,-40138
chr2:242042219-242042894	chr2	+	242042323	242042768	True	NR_028049,NM_182501,NM_002712,NR_028051,NR_028050	chr2,chr2,chr2,chr2,chr2	-,-,+,-,-	MTERFD2,MTERFD2,PPP1R7,MTERFD2,MTERFD2	-576,-576,47133,-576,-576
chr7:127291070-127291404	chr7	+	127291209	127291442	True	NM_006193,NM_014390	chr7,chr7	-,+	PAX4,SND1	-35429,759
chr12:96389064-96389481	chr12	+	96389087	96389495	True	NM_152435,NM_002108	chr12,chr12	+,-	AMDHD1,HAL	-52074,626
chr5:107009056-107009589	chr5	+	107009144	107009634	True	NM_005246,NM_001962	chr5,chr5	+,-	FER,EFNA5	1073888,-2548
chr4:17463872-17465747	chr4	+	17464154	17465786	True	NM_000320,NM_001079827	chr4,chr4	-,+	QDPR,CLRN2	48122,51001
chr4:85504941-85506866	chr4	+	85505055	85506893	True	NM_001263,NM_006168	chr4,chr4	+,-	CDS1,NKX6-1	-1049,-85668
chr2:183882338-183882697	chr2	+	183882392	183882618	True	NM_013436,NM_001142314	chr2,chr2	-,+	NCKAP1,DUSP19	20669,60668
chr11:65224471-65226008	chr11	+	65224755	65226059	True	NR_030343,NM_182556	chr11,chr11	+,-	MIR612,SLC25A45	-12883,-74613
chr8:110343667-110344094	chr8	+	110343766	110344143	True	NM_001193557,NR_036472,NM_020189,NR_036471,NM_001128211,NM_032869	chr8,chr8,chr8,chr8,chr8,chr8	+,+,+,+,-,-	ENY2,ENY2,ENY2,ENY2,NUDCD1,NUDCD1	2408,2408,2408,2408,-1604,2262
chrX:48859895-48860475	chrX	+	48860165	48860491	True	NM_001163322,NM_207672,NM_020137	chrX,chrX,chrX	+,-,-	CCDC120,GRIPAP1,GRIPAP1	56024,-1490,-1490
chrX:73011429-73012581	chrX	+	73011444	73012510	True	NR_001564,NR_003255	chrX,chrX	-,+	XIST,TSIX	60137,195
chr3:135772565-135773191	chr3	+	135772566	135773092	True	NM_181897,NM_001145417	chr3,chr3	+,-	PPP2R3A,MSL2	-31040,140280
chr11:6441391-6442256	chr11	+	6441687	6442283	True	NM_001164,NM_145689,NM_001007593	chr11,chr11,chr11	-,-,+	APBB1,APBB1,SMPD1	-1387,-1043,-30094
chr19:50463690-50463939	chr19	+	50463796	50463868	True	NM_001135163,NM_052884,NR_002825	chr19,chr19,chr19	-,-,+	SIGLEC11,SIGLEC11,SIGLEC16	611,611,9043
chrX:118110203-118110464	chrX	+	118110258	118110398	True	NM_001031855,NM_024778,NM_020721	chrX,chrX,chrX	+,+,-	LONRF3,LONRF3,KIAA1210	-1596,-1596,174194
chr12:109220394-109221422	chr12	+	109220448	109221420	True	NM_001917,NM_001161331	chr12,chr12	+,-	DAO,SSH1	52436,-43
chr10:103986449-103986760	chr10	+	103986486	103986712	True	NM_005029,NM_152310	chr10,chr10	-,+	PITX3,ELOVL3	14569,-395
chr9:34520196-34521190	chr9	+	34520241	34521078	True	NR_024369,NM_198573	chr9,chr9	+,-	LOC415056,ENHO	46931,2010
chr4:44366907-44367811	chr4	+	44366925	44367849	True	NM_198353,NM_021927	chr4,chr4	-,+	KCTD8,GUF1	83033,312583
chr1:243968003-243968388	chr1	+	243968282	243968434	True	NM_181690,NR_033883	chr1,chr1	-,+	AKT3,LOC339529	38177,112269
chr9:140197981-140198204	chr9	+	140198009	140198145	True	NM_017723,NM_001004354	chr9,chr9	+,-	C9orf167,NRARP	-25780,-1306
chr15:41167956-41169467	chr15	+	41168169	41169341	True	NM_020857,NM_133639	chr15,chr15	+,-	VPS18,RHOV	17286,-1682
chr15:49860745-49861625	chr15	+	49860745	49861668	True	NM_152647,NM_001144955	chr15,chr15	-,+	C15orf33,DTWD1	51506,51557
chr2:135676715-135676985	chr2	+	135676840	135677026	True	NM_058241,NM_001241,NR_037649,NR_036549	chr2,chr2,chr2,chr2	+,+,+,-	CCNT2,CCNT2,CCNT2,LOC100129961	-499,-499,-499,-664
chr19:9608133-9608671	chr19	+	9608335	9608693	True	NM_152476,NM_001172651	chr19,chr19	-,+	ZNF560,ZNF177	641,-121403
chr17:18380542-18381468	chr17	+	18380732	18381516	True	NR_003554,NM_001040078	chr17,chr17	-,+	LOC220594,LGALS9C	43100,-684
chr17:18380542-18381468	chr17	-	20369643	20370121	False	NM_001190790,NM_001042685	chr17,chr17	+,-	CDRT15L2,LGALS9B	112915,777
chrX:152992350-152992644	chrX	+	152992355	152992611	True	NM_001139441,NM_001139457,NM_000033,NM_005745,NR_024450	chrX,chrX,chrX,chrX,chrX	-,-,+,-,-	BCAP31,BCAP31,ABCD1,BCAP31,BCAP31	-2773,-2806,-2083,-2517,-2154
chr17:30422155-30423447	chr17	+	30422314	30423209	True	NM_001033566,NR_002222	chr17,chr17	+,-	RHOT1,ARGFXP2	46263,55431
chr17:30422155-30423447	chr17	-	30350957	30351013	False	NM_018428,NM_052888	chr17,chr17	-,+	UTP6,LRRC37B	-122228,-2859
chr17:30422155-30423447	chr17	+	29372661	29373555	False	NM_001128147,NM_024683	chr17,chr17	+,-	NF1,C17orf42	48389,-139375
chr11:47372495-47373740	chr11	+	47372773	47373490	True	NM_000256,NM_001128225	chr11,chr11	-,+	MYBPC3,SLC39A13	813,56555
chr1:154956488-154956909	chr1	+	154956510	154956915	True	NM_025207,NM_001202859,NM_001826,NM_018655,NR_036212,NM_001184892,NM_001184891,NR_024163,NM_001130041,NM_201398,NM_003029	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,-,+,+,+,+,+,+,-,+,-	FLAD1,SHC1,CKS1B,LENEP,MIR4258,FLAD1,FLAD1,CKS1B,SHC1,FLAD1,SHC1	-792,-9551,-9444,9146,-8393,-792,-792,-9444,-9551,-792,-9551
chr1:154161005-154161462	chr1	+	154161167	154161329	True	NM_001043352,NM_001043353,NM_001043351,NM_153649,NR_030600,NM_152263,NM_001127320	chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,-,-,+	TPM3,TPM3,TPM3,TPM3,MIR190B,TPM3,UBAP2L	-5442,-5442,-5442,-5442,4940,3330,31325
chr6:42184630-42185501	chr6	+	42184692	42185538	True	NM_000409,NM_018141	chr6,chr6	+,-	GUCA1A,MRPS10	-61599,145
chr1:95305238-95306403	chr1	+	95305277	95306430	True	NM_152369,NM_001839	chr1,chr1	+,-	SLC44A3,CNN3	-19228,86355
chr22:32342226-32344127	chr22	+	32342475	32344027	True	NM_015372,NM_003405	chr22,chr22	-,+	C22orf24,YWHAH	-1139,-2047
chr10:112685507-112686899	chr10	+	112685539	112686920	True	NM_007373,NM_001195305,NM_001195304,NM_001195307,NM_001195306,NR_024141	chr10,chr10,chr10,chr10,chr10,chr10	+,-,-,-,-,-	SHOC2,BBIP1,BBIP1,BBIP1,BBIP1,BBIP1	-6289,-6415,-6415,-6415,-6845,-6415
chr12:105721604-105723479	chr12	+	105721763	105723528	True	NM_018171,NM_001145199	chr12,chr12	-,+	APPL2,C12orf75	-91755,885
chr2:61246673-61247912	chr2	+	61246799	61247693	True	NM_144709,NM_002618	chr2,chr2	-,+	PUS10,PEX13	-1434,-2048
chr10:72017853-72018933	chr10	+	72018068	72018801	True	NM_022146,NM_021129,NM_004096	chr10,chr10,chr10	-,-,+	NPFFR1,PPA1,EIF4EBP2	24706,-24878,145059
chr1:36092790-36094015	chr1	+	36092928	36094052	True	NM_001199780,NM_178548	chr1,chr1	-,+	PSMB2,TFAP2E	3136,-54009
chr11:60172118-60172845	chr11	+	60172120	60172893	True	NM_022349,NM_001079692,NM_032597	chr11,chr11,chr11	-,+,+	MS4A6A,MS4A14,MS4A14	-221446,-8691,-8691
chr19:49250559-49250840	chr19	+	49250563	49250840	True	NM_019113,NM_000148,NM_017805,NM_182575	chr19,chr19,chr19,chr19	+,-,-,-	FGF21,FUT1,RASIP1,IZUMO1	8503,7858,-6593,-397
chr3:52100634-52100858	chr3	+	52100688	52100838	True	NM_001198898,NR_027331	chr3,chr3	+,-	ACY1,C3orf74	-83439,-1560
chr1:52524564-52525557	chr1	+	52524802	52525442	True	NR_024350,NM_001136497,NM_152265,NM_015913	chr1,chr1,chr1,chr1	+,+,+,-	BTF3L4,BTF3L4,BTF3L4,TXNDC12	-3009,-3009,-3009,-3755
chr9:99775885-99776099	chr9	+	99776042	99776136	True	NM_001045477,NR_002894	chr9,chr9	+,-	FAM22G,HIATL2	-84807,-180
chr1:36039236-36039555	chr1	+	36039254	36039466	True	NM_178548,NM_024874	chr1,chr1	+,-	TFAP2E,KIAA0319L	-334,-16217
chr1:18956251-18956588	chr1	+	18956328	18956588	True	NM_001135254,NM_002584,NM_152232,NM_013945	chr1,chr1,chr1,chr1	+,+,-,+	PAX7,PAX7,TAS1R2,PAX7	911,911,229617,911
chr3:75484080-75484285	chr3	+	75484172	75484234	True	NR_031714,NR_024241	chr3,chr3	+,-	MIR1324,FAM86DP	195679,82
chr11:63383261-63384022	chr11	+	63383573	63383895	True	NM_006054,NM_001128203,NM_007069	chr11,chr11,chr11	+,-,-	RTN3,PLA2G16,PLA2G16	65026,-1632,-1664
chr18:21235979-21236932	chr18	+	21236153	21236794	True	NM_001127717,NM_173505	chr18,chr18	+,-	LAMA3,ANKRD29	32767,6112
chr13:96344113-96345120	chr13	+	96344537	96345071	True	NM_006260,NM_198968	chr13,chr13	+,-	DNAJC3,DZIP1	-15201,-47580
chr16:67537188-67538015	chr16	+	67537565	67538006	True	NM_001138,NM_024519	chr16,chr16	-,+	AGRP,FAM65A	-19849,24710
chr2:26539165-26539728	chr2	+	26539181	26539587	True	NM_001145168,NM_001145169,NM_033505	chr2,chr2,chr2	-,-,+	GPR113,GPR113,EPT1	2380,2433,29366
chr19:54135991-54136404	chr19	+	54136042	54136284	True	NM_001012728,NR_002938	chr19,chr19	+,-	DPRX,LOC284379	-783,-29291
chr17:9940319-9941172	chr17	+	9940463	9941173	True	NM_201432,NM_004246	chr17,chr17	-,+	GAS7,GLP2R	-399,-211133
chr11:370581-370876	chr11	+	370580	370912	True	NM_178537,NM_001135054	chr11,chr11	+,-	B4GALNT4,SIGIRR	-836,44137
chr10:51367010-51368021	chr10	+	51367194	51367932	True	NR_029388,NM_003631,NM_002443	chr10,chr10,chr10	-,-,+	LOC728407,PARG,MSMB	3448,3463,181620
chr10:51367010-51368021	chr10	-	51626823	51627529	False	NM_001145262,NM_006327	chr10,chr10	+,-	NCOA4,TIMM23	-50603,-3487
chr2:211456264-211457659	chr2	+	211456587	211457652	True	NM_001136575,NM_001122634	chr2,chr2	-,+	LANCL1,CPS1	-115088,426
chr18:5542591-5542874	chr18	+	5542605	5542845	True	NM_012307,NR_015389	chr18,chr18	-,+	EPB41L3,LOC339290	1191,-304557
chr5:85591158-85592442	chr5	+	85591190	85592404	True	NR_003719,NR_036243	chr5,chr5	+,-	NBPF22P,MIR4280	-12979,818418
chr7:115851247-115851537	chr7	+	115851281	115851573	True	NM_015641,NM_012252	chr7,chr7	+,-	TES,TFEC	-785,-180483
chr14:63779248-63779730	chr14	+	63779247	63779719	True	NM_145171,NM_020663	chr14,chr14	-,+	GPHB5,RHOJ	4894,-108158
chr8:10516504-10516929	chr8	+	10516597	10516959	True	NM_001040032,NM_178857	chr8,chr8	+,-	C8orf74,RP1L1	13187,-3980
chrX:125606097-125606468	chrX	+	125606112	125606280	True	NM_001122716,NM_178470	chrX,chrX	+,-	CXorf64,DCAF12L1	347466,80612
chr12:53534619-53535251	chr12	+	53534950	53535153	True	NM_003578,NM_015989	chr12,chr12	+,-	SOAT2,CSAD	-37736,39328
chr4:147443845-147444202	chr4	+	147444095	147444241	True	NM_001029998,NM_032128,NM_004575	chr4,chr4,chr4	-,-,+	SLC10A7,SLC10A7,POU4F2	-972,-972,115803
chrX:154028872-154029840	chrX	+	154028950	154029736	True	NM_001166462,NR_002984,NM_001166460,NM_001166461,NM_002436	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	MPP1,SNORA56,MPP1,MPP1,MPP1	4124,-25728,4124,4124,4124
chr7:91763514-91763963	chr7	+	91763694	91764011	True	NM_000786,NM_001146152,NM_019004	chr7,chr7,chr7	-,-,+	CYP51A1,CYP51A1,ANKIB1	-33,98,111536
chr3:10297076-10297594	chr3	+	10297089	10297327	True	NM_001134941,NM_014760	chr3,chr3	-,+	GHRL,TATDN2	35152,-6971
chr2:190583768-190585265	chr2	+	190583916	190584731	True	NM_144708,NM_022353	chr2,chr2	+,-	ANKAR,OSGEPL1	-43256,43244
chr17:1618711-1618915	chr17	+	1618774	1618930	True	NM_001163811,NR_028503,NR_028502,NR_028505,NR_028504,NM_001164407,NM_001163809,NM_001163673,NM_152348,NR_029494	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,-,-,-,+,+,+,-	WDR81,C17orf91,C17orf91,C17orf91,C17orf91,TLCD2,WDR81,WDR81,WDR81,MIR22	8903,686,686,686,686,-5112,9194,886,886,-1493
chr8:56787542-56788126	chr8	+	56787698	56788017	True	NM_002350,NM_152417,NM_001111097	chr8,chr8,chr8	+,-,+	LYN,TMEM68,LYN	4368,-101813,4368
chr17:79354453-79354656	chr17	+	79354511	79354685	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	18854,-50037
chr21:34599967-34601591	chr21	+	34600048	34601638	True	NM_207585,NM_207584,NR_024102,NM_000874	chr21,chr21,chr21,chr21	+,+,-,+	IFNAR2,IFNAR2,C21orf54,IFNAR2	592,592,-57507,592
chr3:130463521-130464587	chr3	+	130463563	130464380	True	NM_014602,NM_001199181	chr3,chr3	-,+	PIK3R4,ATP2C1	1373,104988
chr12:112450380-112450980	chr12	+	112450395	112450897	True	NM_001193453,NM_138341,NM_006817,NM_001193531,NM_001034025	chr12,chr12,chr12,chr12,chr12	-,-,+,-,+	TMEM116,TMEM116,ERP29,TMEM116,ERP29	176,176,254,176,254
chr10:103873438-103873942	chr10	+	103873437	103873942	True	NM_001113407,NM_015062,NM_003893	chr10,chr10,chr10	-,+,-	LDB1,PPRC1,LDB1	6318,18844,831
chr3:178867157-178867477	chr3	+	178867192	178867466	True	NM_152240,NM_006218	chr3,chr3	-,+	ZMAT3,PIK3CA	-77536,-932
chr12:52587263-52588079	chr12	+	52587485	52588119	True	NM_182507,NM_001081492,NR_027358	chr12,chr12,chr12	-,-,+	KRT80,KRT80,LOC283404	-1701,-1701,16594
chr14:105157382-105157935	chr14	+	105157484	105157894	True	NM_207379,NM_032714,NM_001031714,NM_022489	chr14,chr14,chr14,chr14	-,+,+,+	TMEM179,INF2,INF2,INF2	-86387,-1592,-1592,-1592
chr22:35872174-35873011	chr22	+	35872304	35872810	True	NM_005368,NM_014310	chr22,chr22	-,+	MB,RASD2	140625,64541
chrX:140930536-140931121	chrX	+	140930592	140931156	True	NM_138702,NM_145665	chrX,chrX	+,-	MAGEC3,SPANXE	-4553,-143937
chr1:117112313-117112625	chr1	+	117112522	117112584	True	NM_001779,NM_001144822,NR_031564,NR_026665	chr1,chr1,chr1,chr1	-,-,+,-	CD58,CD58,MIR320B1,CD58	1181,1181,101786,1181
chr16:24550146-24550577	chr16	+	24550354	24550545	True	NM_032626,NM_001006634,NM_018703,NM_006910	chr16,chr16,chr16,chr16	+,-,+,+	RBBP6,ARHGAP17,RBBP6,RBBP6	362,476181,362,362
chr12:6560202-6560534	chr12	+	6560253	6560481	True	NM_001242,NM_018009,NR_015382	chr12,chr12,chr12	+,+,-	CD27,TAPBPL,LOC678655	-6253,695,252
chr10:112328298-112329144	chr10	+	112328364	112329085	True	NM_005871,NM_005445	chr10,chr10	-,+	SMNDC1,SMC3	-263657,-973
chr11:34128164-34128671	chr11	+	34128167	34128499	True	NM_001144030,NM_024662,NM_005574	chr11,chr11,chr11	+,+,-	NAT10,NAT10,LMO2	-1107,-1107,-214331
chr11:46384556-46384982	chr11	+	46384576	46384822	True	NM_000741,NM_001105540	chr11,chr11	-,+	CHRM4,DGKZ	23335,-1482
chr12:52831897-52833084	chr12	+	52832089	52832995	True	NM_004693,NM_002284	chr12,chr12	-,+	KRT75,KRT86	-3979,-136491
chr5:58860339-58861132	chr5	+	58860363	58861059	True	NM_006203,NR_024617	chr5,chr5	-,+	PDE4D,PART1	21315,922480
chr2:175485101-175485511	chr2	+	175485309	175485484	True	NM_003387,NM_024583	chr2,chr2	-,+	WIPF1,SCRN3	13874,-224911
chr16:86591789-86592588	chr16	+	86591819	86592293	True	NM_001159380,NM_001159378,NM_001159379,NR_027490,NM_005251,NM_022764,NM_001159377,NR_027489,NR_026674	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	-,-,-,-,+,-,-,-,+	MTHFSD,MTHFSD,MTHFSD,MTHFSD,FOXC2,MTHFSD,MTHFSD,MTHFSD,FLJ30679	-3010,-2978,-2978,-2978,8563,-2978,-2978,-2978,-2944
chr9:139223161-139223753	chr9	+	139223300	139223706	True	NM_015597,NM_001145638,NR_026964	chr9,chr9,chr9	+,+,-	GPSM1,GPSM1,LOC26102	-1419,-1419,-1521
chr7:44225805-44226583	chr7	+	44226145	44226617	True	NM_006555,NM_000162	chr7,chr7	+,-	YKT6,GCK	13960,2455
chr15:64385950-64386721	chr15	+	64386030	64386702	True	NM_032231,NM_148955,NM_001014812,NM_003099,NM_152826	chr15,chr15,chr15,chr15,chr15	-,+,-,+,+	FAM96A,SNX1,FAM96A,SNX1,SNX1	-19,1474,-19,1474,1474
chr7:99954282-99955520	chr7	+	99954387	99955376	True	NM_178238,NR_003613	chr7,chr7	+,-	PILRB,PMS2P1	249,-20457
chr19:15619568-15620527	chr19	+	15619647	15620421	True	NM_173483,NM_052890	chr19,chr19	+,-	CYP4F22,PGLYRP2	-362,-29332
chr12:112276003-112276941	chr12	+	112276219	112276781	True	NR_015404,NM_139078,NM_003668	chr12,chr12,chr12	-,+,+	C12orf47,MAPKAPK5,MAPKAPK5	3975,3497,3497
chr19:7989114-7989520	chr19	+	7989117	7989431	True	NM_206833,NM_001195259,NM_003083,NR_030717	chr19,chr19,chr19,chr19	-,+,+,+	CTXN1,LOC645781,SNAPC2,SNAPC2	1670,-8136,-3974,-3301
chr11:66277559-66277786	chr11	+	66277658	66277804	True	NM_024649,NM_207340	chr11,chr11	+,-	BBS1,ZDHHC24	314,35917
chr2:189638426-189639667	chr2	+	189638425	189639493	True	NM_052952,NM_000090	chr2,chr2	-,+	DIRC1,COL3A1	15388,199605
chr20:48346954-48347171	chr20	+	48347038	48347114	True	NM_015266,NM_004776	chr20,chr20	+,-	SLC9A8,B4GALT5	82135,-16617
chr17:28250738-28252453	chr17	+	28250948	28252102	True	NM_033389,NM_001145053	chr17,chr17	-,+	SSH2,EFCAB5	4971,4771
chr14:102095356-102095710	chr14	+	102095426	102095758	True	NR_031649,NM_001362	chr14,chr14	-,+	MIR1247,DIO3	-68667,-67789
chr8:37350751-37351709	chr8	+	37350904	37351748	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	201552,253866
chr11:86017896-86019783	chr11	+	86019503	86019602	True	NR_024596,NM_016401,NM_007166,NR_024598,NR_024597	chr11,chr11,chr11,chr11,chr11	+,+,-,+,+	C11orf73,C11orf73,PICALM,C11orf73,C11orf73	-5162,-6307,-239395,-6307,-6307
chr3:119218099-119218567	chr3	+	119218555	119218619	True	NM_016589,NM_018266	chr3,chr3	+,-	C3orf1,TMEM39A	-1238,-36084
chr12:103352370-103352635	chr12	+	103352387	103352681	True	NM_000277,NM_004316	chr12,chr12	-,+	PAH,ASCL1	-41006,-986
chr19:44004245-44005426	chr19	+	44004397	44005159	True	NM_198850,NM_174945	chr19,chr19	-,+	PHLDB3,ZNF575	3884,32180
chrX:152162920-152164034	chrX	+	152162929	152163457	True	NM_001184924,NM_001178115,NM_052926,NM_001103151,NM_001103150	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	PNMA5,ZNF185,PNMA5,PNMA5,PNMA5	-258,-52765,-2168,-2168,-2168
chr10:81788809-81790258	chr10	+	81788911	81790128	True	NR_027428,NM_025125	chr10,chr10	-,+	LOC219347,C10orf57	48871,48297
chr8:144727960-144729489	chr8	+	144727994	144729267	True	NM_014789,NM_001082480,NM_003313	chr8,chr8,chr8	+,+,-	ZNF623,ZNF623,TSTA3	2686,-9678,-28262
chr20:1470972-1471546	chr20	+	1470974	1471548	True	NM_014723,NM_001122962,NM_001134836	chr20,chr20,chr20	+,-,-	SNPH,SIRPB2,SIRPB2	-224065,743,743
chr15:48500268-48501299	chr15	+	48500310	48501262	True	NM_000338,NM_016132,NM_001184832	chr15,chr15,chr15	+,-,+	SLC12A1,MYEF2,SLC12A1	-1863,-29752,-1863
chr8:17270306-17270606	chr8	+	17270326	17270512	True	NM_001008539,NM_004686	chr8,chr8	+,-	SLC7A2,MTMR7	84084,578
chr5:179104878-179105242	chr5	+	179104989	179105263	True	NM_001024649,NM_001164444	chr5,chr5	+,-	CANX,CBY3	20666,2762
chr9:6412696-6413108	chr9	+	6412719	6413128	True	NM_000170,NM_152896	chr9,chr9	-,+	GLDC,UHRF2	232614,22
chr19:54676992-54677582	chr19	+	54677077	54677552	True	NM_001145303,NM_144686,NM_024075	chr19,chr19,chr19	-,-,+	TMC4,TMC4,TSEN34	-133,-133,16566
chr17:7759731-7759969	chr17	+	7759884	7760018	True	NM_032356,NM_144607,NM_203411	chr17,chr17,chr17	-,+,+	LSMD1,CYB5D1,TMEM88	1204,1045,-1551
chr20:19270136-19271823	chr20	+	19270143	19271727	True	NR_024564,NM_020689	chr20,chr20	-,+	LOC100130264,SLC24A3	-4903,-76904
chr12:49504495-49505499	chr12	+	49504570	49505194	True	NM_005430,NM_018113	chr12,chr12	+,-	WNT1,LMBR1L	-132385,26
chr14:92786664-92787239	chr14	+	92786670	92787274	True	NM_153648,NM_004545,NM_153646,NM_153647	chr14,chr14,chr14,chr14	+,-,+,+	SLC24A4,NDUFB1,SLC24A4,SLC24A4	1650,-198517,2877,2262
chr11:58320528-58321504	chr11	+	58320936	58321502	True	NM_004811,NM_001197051	chr11,chr11	-,+	LPXN,ZFP91	21938,25084
chr8:11324433-11324925	chr8	+	11324492	11324966	True	NM_001715,NM_053279	chr8,chr8	+,-	BLK,FAM167A	26554,-216
chr19:17970082-17970327	chr19	+	17970111	17970327	True	NM_000980,NM_000215,NR_001593,NR_000012	chr19,chr19,chr19,chr19	+,-,+,+	RPL18A,JAK3,RPL18AP3,SNORA68	403,-11270,399,3069
chr19:51141331-51142386	chr19	+	51141346	51142416	True	NM_001160328,NM_001195076,NM_001160329,NM_032298	chr19,chr19,chr19,chr19	-,+,-,-	SYT3,LOC342918,SYT3,SYT3	726,10285,726,-44
chr15:74725220-74725441	chr15	+	74725224	74725486	True	NM_001146029,NM_006465,NM_001146030,NM_003612	chr15,chr15,chr15,chr15	-,+,-,-	SEMA7A,ARID3B,SEMA7A,SEMA7A	863,108061,565,863
chrX:48620463-48620721	chrX	+	48620574	48620762	True	NM_013271,NM_001080489	chrX,chrX	-,+	PCSK1N,GLOD5	73248,-471
chr3:142451229-142452208	chr3	+	142451255	142451983	True	NM_003304,NM_001184	chr3,chr3	+,-	TRPC1,ATR	-8040,-153587
chr17:47308267-47308857	chr17	+	47308368	47308896	True	NM_001143804,NM_178500,NR_034161	chr17,chr17,chr17	-,-,+	PHOSPHO1,PHOSPHO1,FLJ40194	-240,-240,16708
chr11:46261755-46262417	chr11	+	46261765	46262229	True	NM_016621,NM_052854	chr11,chr11	-,+	PHF21A,CREB3L1	-118780,36998
chr10:105991614-105991856	chr10	+	105991615	105991729	True	NM_001191003,NM_025145	chr10,chr10	+,-	GSTO1,WDR96	22222,441
chr4:2934849-2935507	chr4	+	2934899	2935517	True	NR_015453,NM_001120,NM_001146069	chr4,chr4,chr4	+,-,-	C4orf10,MFSD10,MFSD10	1760,497,1119
chr2:33105859-33106813	chr2	+	33106112	33106509	True	NR_027100,NM_021209,NR_027099	chr2,chr2,chr2	+,-,+	LOC285045,NLRC4,LOC285045	1358,-615300,1256
chr19:54822316-54822689	chr19	+	54822527	54822737	True	NM_021250,NM_181879,NM_181986,NM_001005367,NM_181985	chr19,chr19,chr19,chr19,chr19	-,-,-,+,-	LILRA5,LILRA5,LILRA5,TTYH1,LILRA5	1722,1681,1681,103867,1681
chr16:28996651-28997418	chr16	+	28996798	28997444	True	NM_001014987,NM_024816,NM_014387,NM_001014989,NM_001014988	chr16,chr16,chr16,chr16,chr16	+,-,+,+,+	LAT,RABEP2,LAT,LAT,LAT	-462,-60266,-462,-702,-462
chr1:176431409-176432170	chr1	+	176431408	176432198	True	NM_021936,NM_020318,NM_022457	chr1,chr1,chr1	+,+,-	PAPPA2,PAPPA2,RFWD2	108,108,-255038
chr11:61938114-61938743	chr11	+	61938185	61938791	True	NM_006552,NM_206998	chr11,chr11	+,-	SCGB1D1,SCGB1D4	18918,127795
chr6:31775517-31776182	chr6_qbl_hap6	+	3069411	3069626	False	NM_005345,NM_005527,NM_021177	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	+,-,-	HSPA1A,HSPA1L,LSM2	7311,6914,-1031
chr6:31775517-31776182	chr6_dbb_hap3	+	3061357	3061571	False	NM_005345,NM_005527,NM_021177	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	+,-,-	HSPA1A,HSPA1L,LSM2	7306,6909,-1031
chr6:31775517-31776182	chr6	+	31775774	31775988	True	NM_005345,NM_005527,NM_021177	chr6,chr6,chr6	+,-,-	HSPA1A,HSPA1L,LSM2	7302,6905,-1031
chr6:31775517-31776182	chr6_apd_hap1	+	3090525	3090739	False	NM_005345,NM_005527,NM_021177	chr6_apd_hap1,chr6_apd_hap1,chr6_apd_hap1	+,-,-	HSPA1A,HSPA1L,LSM2	7312,6915,-1031
chr6:31775517-31776182	chr6_cox_hap2	+	3285347	3285561	False	NM_005345,NM_005527,NM_021177	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,-,-	HSPA1A,HSPA1L,LSM2	7309,6912,-1033
chr6:142623143-142623600	chr6	+	142623287	142623621	True	NM_198569,NM_020455,NM_002511,NM_001032394,NM_001032395	chr6,chr6,chr6,chr6,chr6	+,+,-,+,+	GPR126,GPR126,NMBR,GPR126,GPR126	-282,-282,-213351,-282,-282
chr11:625380-625892	chr11	+	625409	625921	True	NM_004031,NM_000797,NM_004029,NM_001171968,NM_021924,NM_021920,NM_001572,NM_031264	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,+,-,-,-,-,-,-	IRF7,DRD4,IRF7,CDHR5,CDHR5,SCT,IRF7,CDHR5	-9681,11383,-9410,-342,-342,1302,-9410,-342
chr11:55334240-55334894	chr11	+	55334256	55334629	True	NM_001004700,NM_001004701	chr11,chr11	-,+	OR4C11,OR4C16	37283,4974
chr9:139761696-139762253	chr9	+	139761879	139762298	True	NM_003792,NM_153200,NM_206920	chr9,chr9,chr9	-,-,+	EDF1,EDF1,MAMDC4	-1141,-1141,-15117
chr10:83636330-83637824	chr10	+	83636575	83637759	True	NM_001165973,NM_001165972,NM_138812,NM_001010848	chr10,chr10,chr10,chr10	+,+,-,+	NRG3,NRG3,DYDC1,NRG3	116,-1556,-1520075,-1556
chr19:46003483-46004386	chr19	+	46003746	46004332	True	NM_003370,NM_005619,NM_206900,NM_001080401,NM_206901	chr19,chr19,chr19,chr19,chr19	+,-,-,+,-	VASP,RTN2,RTN2,PPM1N,RTN2	6355,-3435,-3433,-2066,-7272
chr6:15014369-15014917	chr6	+	15014445	15014925	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	231601,648416
chr13:45167256-45167883	chr13	+	45167717	45167890	True	NM_001010897,NM_183422	chr13,chr13	+,-	SERP2,TSC22D1	-219801,-17016
chr22:18894046-18894288	chr22	+	18894070	18894336	True	NM_001195226,NM_005675	chr22,chr22	-,+	PRODH,DGCR6	29678,-385
chr22:18894046-18894288	chr22	-	20307183	20307233	False	NR_026919,NM_033257	chr22,chr22	+,-	LOC150197,DGCR6L	-113379,445
chr17:20494028-20494676	chr17	+	20494136	20494642	True	NM_001190790,NR_029393	chr17,chr17	+,-	CDRT15L2,KRT16P3	-11161,-86325
chr17:20494028-20494676	chr17	+	15691464	15691969	False	NM_006470,NR_002211	chr17,chr17	-,+	TRIM16,MEIS3P1	-105271,-1362
chr21:46113979-46114775	chr21	+	46113978	46114808	True	NM_181686,NM_198699	chr21,chr21	-,+	KRTAP12-1,KRTAP10-12	-11900,2278
chr9:72662290-72663164	chr9	+	72662575	72663141	True	NM_153267,NM_001099666	chr9,chr9	+,-	MAMDC2,PTAR1	-4137,-287699
chr18:5891489-5891726	chr18	+	5891499	5891749	True	NM_001080209,NR_015389	chr18,chr18	-,+	TMEM200C,LOC339290	404,-653451
chrY:24064206-24065126	chrY	+	24064508	24064576	True	NM_001006120,NM_001006121,NR_001527,NM_001006118	chrY,chrY,chrY,chrY	-,-,+,-	RBMY1D,RBMY1B,TTTY6,RBMY1E	-334,-294,226535,-334
chrY:24064206-24065126	chrY	+	9162790	9162846	False	NR_001546,NR_001547,NM_001164471	chrY,chrY,chrY	-,-,+	TTTY20,RBMY1A3P,TSPY4	9645,-2307,32605
chrY:24064206-24065126	chrY	+	24040967	24041035	False	NM_005058,NM_001006121,NR_001527,NM_001006120,NM_001006118	chrY,chrY,chrY,chrY,chrY	-,-,+,-,-	RBMY1A1,RBMY1B,TTTY6,RBMY1D,RBMY1E	-328,-294,250076,-334,-334
chrY:24064206-24065126	chrY	-	23672861	23672929	False	NM_005058,NM_001006121,NM_001006120,NR_001537,NM_001006118	chrY,chrY,chrY,chrY,chrY	+,+,+,-,+	RBMY1A1,RBMY1B,RBMY1D,TTTY13,RBMY1E	328,294,334,83673,334
chrY:24064206-24065126	chrY	-	23696402	23696470	False	NM_005058,NM_001006121,NM_001006120,NR_001537	chrY,chrY,chrY,chrY	+,+,+,-	RBMY1A1,RBMY1B,RBMY1D,TTTY13	328,294,334,60132
chr19:52379237-52379851	chr19	+	52379239	52379899	True	NR_024181,NM_001031721	chr19,chr19	-,+	ZNF577,ZNF613	11340,50788
chr20:47894031-47894497	chr20	+	47894440	47894502	True	NR_003605,NR_003604,NR_002433,NR_003606,NR_003695,NR_036658,NR_036659,NM_021035,NR_003030	chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,+,+,+,+,+,+,-,+	NCRNA00275,NCRNA00275,SNORD12C,NCRNA00275,SNORD12B,NCRNA00275,NCRNA00275,ZNFX1,SNORD12	212,212,979,212,2347,212,676,304,2717
chr7:36403855-36405160	chr7	+	36404262	36405030	True	NM_015314,NM_018685,NM_001199708,NM_001199707,NM_001199706	chr7,chr7,chr7,chr7,chr7	-,+,-,-,-	KIAA0895,ANLN,KIAA0895,KIAA0895,KIAA0895	1870,24401,1898,1802,1862
chr17:37702341-37703479	chr17	+	37702795	37703309	True	NM_032192,NM_006160	chr17,chr17	+,-	PPP1R1B,NEUROD2	79869,60916
chr17:41156541-41157232	chr17	+	41156769	41157113	True	NM_006373,NM_000988,NM_005533	chr17,chr17,chr17	-,+,+	VAT1,RPL27,IFI35	17396,-6385,1628
chr6:10831704-10833025	chr6	+	10832032	10832728	True	NM_001040274,NM_005906	chr6,chr6	+,-	SYCP2L,MAK	54335,-922
chr3:135746013-135747354	chr3	+	135746275	135747387	True	NM_181897,NM_001145417	chr3,chr3	+,-	PPP2R3A,MSL2	-4750,165973
chr12:125019804-125020385	chr12	+	125020150	125020364	True	NM_001077261,NM_181709	chr12,chr12	-,+	NCOR2,FAM101A	31696,-246491
chrX:46696454-46696701	chrX	+	46696464	46696666	True	NM_032591,NM_006915	chrX,chrX	-,+	SLC9A7,RP2	-77992,-168
chr1:222763808-222764112	chr1	+	222763828	222764107	True	NM_001201536,NM_139352,NM_198551,NM_005681	chr1,chr1,chr1,chr1	-,-,+,-	TAF1A,TAF1A,MIA3,TAF1A	-553,-553,27336,-553
chr1:241597255-241597905	chr1	+	241597378	241597935	True	NM_002924,NM_003679	chr1,chr1	-,+	RGS7,KMO	-76900,97744
chr19:50977955-50978199	chr19	+	50978098	50978168	True	NM_138411,NM_175063,NM_206538	chr19,chr19,chr19	-,+,+	FAM71E1,C19orf63,C19orf63	1885,1567,1567
chr17:7529131-7529366	chr17	+	7529151	7529219	True	NM_001040,NM_133491,NM_001146279,NM_001146280,NM_001146281,NR_027462	chr17,chr17,chr17,chr17,chr17,chr17	+,-,+,+,+,+	SHBG,SAT2,SHBG,SHBG,SHBG,SHBG	4233,2025,4233,4233,4233,2067
chr17:60705314-60705533	chr17	+	60705394	60705460	True	NM_001100875,NM_006039	chr17,chr17	-,+	MARCH10,MRC2	178601,-683
chr1:7910188-7910724	chr1	+	7910331	7910699	True	NM_006786,NM_021995,NM_016831	chr1,chr1,chr1	-,-,+	UTS2,UTS2,PER3	2455,2902,-65620
chr11:65815942-65816426	chr11	+	65815946	65816260	True	NM_033036,NM_006842	chr11,chr11	-,+	GAL3ST3,SF3B2	441,3555
chr2:74901710-74902311	chr2	+	74902035	74902327	True	NM_138804,NM_004263	chr2,chr2	-,+	C2orf65,SEMA4F	-26871,-20693
chr1:160283883-160285359	chr1	+	160283934	160285388	True	NM_001098398,NR_002190,NR_036493	chr1,chr1,chr1	-,+,-	COPA,SUMO1P3,PEX19	28017,1666,-28993
chr19:13906551-13907671	chr19	+	13906567	13907709	True	NR_036515,NM_023072	chr19,chr19	-,+	LOC284454,ZSWIM4	39444,-344
chr11:61713714-61714110	chr11	+	61713803	61713981	True	NM_001139443,NM_004183,NM_002032	chr11,chr11,chr11	+,+,-	BEST1,BEST1,FTH1	3374,3374,21201
chr17:39843399-39843883	chr17	+	39843607	39843755	True	NM_005801,NR_033415,NM_001079870	chr17,chr17,chr17	+,-,-	EIF1,KRT42P,HAP1	1371,-47156,47205
chr11:6519451-6520661	chr11	+	6519494	6520668	True	NM_173589,NM_144666,NM_012402	chr11,chr11,chr11	+,+,-	DNHD1,DNHD1,ARFIP2	-1019,-1019,-16899
chr3:142681274-142681986	chr3	+	142681432	142681966	True	NM_001080415,NM_198504	chr3,chr3	+,-	U2SURP,PAQR9	38405,262
chr2:176965269-176965506	chr2	+	176965287	176965415	True	NM_001080458,NM_000523,NM_021192,NM_021193	chr2,chr2,chr2,chr2	-,+,+,+	EVX2,HOXD13,HOXD11,HOXD12	-16597,-7806,6668,-808
chr22:42194726-42195952	chr22	+	42195077	42195929	True	NM_001003796,NM_024821	chr22,chr22	-,+	NHP2L1,CCDC134	-110164,748
chr11:26355122-26355792	chr11	+	26355171	26355811	True	NM_031418,NM_001135091	chr11,chr11	+,-	ANO3,MUC15	-1546,238054
chr8:120844922-120845430	chr8	+	120844963	120845454	True	NM_003184,NM_022783	chr8,chr8	-,+	TAF2,DEPTOR	49,40445
chr16:4893969-4895661	chr16	+	4894198	4895682	True	NM_001079514,NM_016936,NM_032569	chr16,chr16,chr16	+,+,-	UBN1,UBN1,GLYR1	2229,6394,1671
chr15:67541531-67543084	chr15	+	67541735	67543060	True	NM_001031715,NM_022784,NM_024666	chr15,chr15,chr15	+,+,-	IQCH,IQCH,AAGAB	4077,4077,4064
chr12:122668446-122668732	chr12	+	122668545	122668643	True	NM_001014336,NM_001098519	chr12,chr12	-,+	IL31,LRRC43	-9799,-939
chr3:52281288-52281967	chr3	+	52281301	52281939	True	NM_001122870,NM_007284,NM_144641	chr3,chr3,chr3	+,-,+	PPM1M,TWF2,PPM1M	-1166,-8118,-1543
chr2:32493181-32494849	chr2	+	32493333	32494647	True	NM_032312,NM_021209,NM_001199138,NM_001199139	chr2,chr2,chr2,chr2	+,-,-,-	YIPF4,NLRC4,NLRC4,NLRC4	8310,-2521,-3384,-2644
chr20:43279013-43279739	chr20	+	43279355	43279481	True	NM_003881,NM_000022	chr20,chr20	+,-	WISP2,ADA	64403,945
chr6:43268120-43269339	chr6	+	43268150	43269305	True	NM_006672,NM_153320,NM_206922	chr6,chr6,chr6	+,+,-	SLC22A7,SLC22A7,CRIP3	-2203,-2203,7275
chr15:65824334-65824817	chr15	+	65824443	65824591	True	NM_197961,NM_016395	chr15,chr15	-,+	DPP8,PTPLAD1	-14408,-1674
chr12:50559056-50559825	chr12	+	50559235	50559829	True	NM_032901,NM_147190	chr12,chr12	+,-	C12orf62,LASS5	-53387,1318
chr6:15068205-15069667	chr6	+	15068684	15069290	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	177236,594049
chrX:71348884-71349426	chrX	+	71348948	71349410	True	NM_207422,NM_001024455	chrX,chrX	+,-	FLJ44635,RGAG4	14623,2391
chr12:12419051-12419370	chr12	+	12419056	12419393	True	NM_058169,NM_002336	chr12,chr12	+,-	LOH12CR1,LRP6	90626,468
chr11:64019653-64019997	chr11	+	64019718	64020042	True	NM_138689,NM_000932,NM_001184883	chr11,chr11,chr11	-,+,+	PPP1R14B,PLCB3,PLCB3	-5305,-774,-774
chr17:38294205-38294841	chr17	+	38294498	38294738	True	NM_021724,NM_007359	chr17,chr17	-,+	NR1D1,CASC3	-37525,1768
chrX:64196076-64196341	chrX	+	64196121	64196341	True	NM_018684,NM_001178033,NM_001010888	chrX,chrX,chrX	-,-,+	ZC4H2,ZC4H2,ZC3H12B	122,122,512273
chr9:43032651-43033568	chr9	+	43032790	43033609	True	NR_026759,NR_026558	chr9,chr9	-,+	FAM95B1,AQP7P3	-231,-174697
chr9:43032651-43033568	chr9	-	42468291	42469110	False	NR_003670,NR_026759	chr9,chr9	-,+	KGFLP2,FAM95B1	-448707,231
chr9:43032651-43033568	chr9	-	69475719	69476412	False	NM_001085457,NM_001098805	chr9,chr9	-,+	CBWD6,ANKRD20A4	-213126,-93789
chr11:2905183-2905386	chr11	+	2905313	2905377	True	NR_024627,NM_000076,NM_001122631,NM_001122630	chr11,chr11,chr11,chr11	+,-,-,-	KCNQ1DN,CDKN1C,CDKN1C,CDKN1C	-14101,1668,1668,1668
chr21:11099888-11100694	chr21	+	11099986	11100569	True	NR_037458,NM_181704,NM_001187,NM_182482,NM_182481,NM_182484	chr21,chr21,chr21,chr21,chr21,chr21	+,-,-,-,-,-	MIR3687,BAGE4,BAGE,BAGE2,BAGE3,BAGE5	-1273834,-1061,-1049,-1061,-1061,-1061
chr1:25940928-25942516	chr1	+	25941118	25942496	True	NM_020379,NM_138618	chr1,chr1	+,-	MAN1C1,RHCE	1462,-193755
chr14:51284274-51284573	chr14	+	51284307	51284463	True	NM_181533,NM_020921	chr14,chr14	+,-	ABHD12B,NIN	54414,13430
chr1:149902850-149903058	chr1	+	149902852	149903100	True	NM_181873,NM_005850,NM_016074,NM_001145862	chr1,chr1,chr1,chr1	-,-,+,-	MTMR11,SF3B4,BOLA1,MTMR11	5220,-2708,-31749,5745
chr9:35971757-35972168	chr1	-	43162372	43162449	False	NM_001123395,NM_004559	chr1,chr1	-,+	CLDN19,YBX1	43527,-14358
chr9:35971757-35972168	chr9	+	35971760	35972125	True	NR_024283,NM_019897	chr9,chr9	+,-	LOC158376,OR2S2	-62331,-13609
chr6:31084681-31085002	chr6	+	31084750	31084982	True	NM_014068,NM_001264,NM_014070	chr6,chr6,chr6	+,-,-	PSORS1C1,CDSN,C6orf15	-2193,3320,-4418
chr6:31084681-31085002	chr6_cox_hap2	+	2599454	2599524	False	NM_014068,NM_001264,NM_014070	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	+,-,-	PSORS1C1,CDSN,C6orf15	-2193,3483,-4418
chr10:43046741-43047589	chr10	+	43046924	43047510	True	NR_026827,NR_026777	chr10,chr10	+,-	LOC84856,ZNF37BP	-76038,820
chr22:39269103-39270553	chr22	+	39269412	39270448	True	NM_014292,NM_145699	chr22,chr22	-,+	CBX6,APOBEC3A	-1154,83078
chr9:97490780-97492286	chr9	+	97490817	97492276	True	NM_001127628,NM_032823,NM_001193331	chr9,chr9,chr9	-,+,+	FBP1,C9orf3,C9orf3	-88286,-1921,-1921
chr15:22561877-22562264	chr15	+	22561920	22562326	True	NR_027407,NR_033735	chr15,chr15	-,+	GOLGA8DP,REREP3	153465,-15406
chr14:57077253-57077843	chr14	+	57077252	57077669	True	NM_017799,NM_172337	chr14,chr14	+,-	C14orf101,OTX2	-30796,194733
chr20:34192373-34194042	chr20	+	34192663	34194026	True	NR_024377,NM_003116	chr20,chr20	-,+	FER1L4,SPAG4	1508,9782
chr12:80084691-80084943	chr12	+	80084696	80084890	True	NR_031700,NM_002583	chr12,chr12	+,-	MIR1252,PAWR	-271710,-50
chr14:45603839-45604839	chr14	+	45603866	45604824	True	NM_002013,NM_020937	chr14,chr14	-,+	FKBP3,FANCM	-134,311
chr21:30746481-30747246	chr21	+	30746607	30747239	True	NR_027655,NM_006585	chr21,chr21	+,-	BACH1,CCT8	-69108,-300597
chr11:67808910-67809185	chr11	+	67809058	67809122	True	NM_030930,NM_006019,NM_006053	chr11,chr11,chr11	-,+,+	UNC93B1,TCIRG1,TCIRG1	-37465,-2647,1324
chr17:21282189-21282500	chr17	+	21282263	21282472	True	NM_152914,NM_021012	chr17,chr17	-,+	C17orf103,KCNJ12	-125685,-2615
chr5:92917270-92917863	chr5	+	92917833	92917893	True	NR_021490,NR_021491,NM_005654	chr5,chr5,chr5	-,-,+	FLJ42709,FLJ42709,NR2F1	-830,-880,1149
chr7:143803060-143803458	chr7	+	143803113	143803467	True	NM_001005480,NM_001003702	chr7,chr7	+,-	OR2A2,ARHGEF35	3208,89374
chr12:118815332-118816408	chr12	+	118815380	118816057	True	NM_022491,NM_016281	chr12,chr12	+,-	SUDS3,TAOK3	-1073,-4630
chr17:80313266-80314118	chr17	+	80313350	80314102	True	NM_003004,NM_207459	chr17,chr17	-,+	SECTM1,TEX19	-21429,3020
chr2:198056789-198058460	chr2	+	198056896	198058045	True	NM_001195144,NM_025147	chr2,chr2	-,+	ANKRD44,COQ10B	117530,260185
chr7:22742052-22743043	chr7	+	22742256	22742894	True	NM_000600,NM_019059	chr7,chr7	+,-	IL6,TOMM7	23871,119577
chr9:96213942-96214146	chr9	+	96213941	96214069	True	NM_198841,NM_014612	chr9,chr9	-,+	FAM120AOS,FAM120A	1855,103
chr6:159071074-159072344	chr6	+	159071088	159072323	True	NM_006519,NM_001009991	chr6,chr6	-,+	DYNLT1,SYTL3	-5284,-93
chr1:149897745-149899024	chr1	+	149898065	149899025	True	NM_181873,NM_001145862,NM_005850,NM_014849,NM_016074	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	MTMR11,MTMR11,SF3B4,SV2A,BOLA1	9298,9823,1176,-8631,-26963
chr18:33284766-33286190	chr18	+	33284918	33286133	True	NR_029616,NM_020474	chr18,chr18	-,+	MIR187,GALNT1	198806,-50446
chr2:114038133-114039835	chr2	+	114038304	114039851	True	NR_015377,NM_003466,NM_013952,NM_013953,NM_013992	chr2,chr2,chr2,chr2,chr2	+,-,-,-,-	LOC654433,PAX8,PAX8,PAX8,PAX8	-44517,-1806,-1806,-1806,-1806
chr7:27183696-27184157	chr7	+	27183914	27184140	True	NR_002795,NM_019102,NM_024014	chr7,chr7,chr7	+,-,-	HOXA11-AS1,HOXA5,HOXA6	40886,-627,3288
chr1:9139158-9139457	chr1	+	9139187	9139419	True	NM_001215,NR_024180,NM_003039,NM_001135585	chr1,chr1,chr1,chr1	+,-,-,-	CA6,SLC2A5,SLC2A5,SLC2A5	-133316,9141,-9300,-9300
chr14:69260674-69260992	chr14	+	69260686	69261041	True	NM_004926,NM_207442,NM_001193360	chr14,chr14,chr14	-,-,+	ZFP36L1,C14orf181,EXD2	-901,2199,397152
chr8:143914477-143915774	chr8	+	143914519	143915771	True	NM_002066,NM_003695,NM_000497	chr8,chr8,chr8	+,-,-	GML,LY6D,CYP11B1	445,-46511,45515
chr8:143914477-143915774	chr8	-	143919305	143919355	False	NM_002066,NM_000497	chr8,chr8	+,-	GML,CYP11B1	-3139,41931
chr13:84457256-84457505	chr13	+	84457284	84457544	True	NM_015567,NM_052910	chr13,chr13	+,-	SLITRK5,SLITRK1	3867325,-756
chr20:46416771-46417610	chr20	+	46416833	46417500	True	NM_018837,NM_198596,NM_181659,NM_001161841	chr20,chr20,chr20,chr20	-,-,+,-	SULF2,SULF2,NCOA3,SULF2	-2025,-1473,-286283,-1473
chr9:34375193-34376235	chr9	+	34375249	34376057	True	NM_147168,NM_147169,NM_020702,NM_147173	chr9,chr9,chr9,chr9	-,-,-,+	C9orf24,C9orf24,KIAA1161,NUDT2	5591,5591,887,-45797
chr19:44666990-44668987	chr19	+	44667045	44669001	True	NR_033341,NM_001032372,NM_001032373,NM_001032374,NM_015919,NM_001146220	chr19,chr19,chr19,chr19,chr19,chr19	-,+,+,+,+,+	LOC100379224,ZNF226,ZNF226,ZNF226,ZNF226,ZNF226	-49709,315,247,247,247,213
chr17:40761816-40762056	chr17	+	40761863	40762033	True	NM_001070,NR_026697,NM_178126	chr17,chr17,chr17	+,-,-	TUBG1,FAM134C,FAM134C	-556,-418,-418
chr3:23987859-23988831	chr3	+	23988077	23988801	True	NM_001145425,NM_005126,NM_020345	chr3,chr3,chr3	+,+,-	NR1D2,NR1D2,NKIRAS1	-516,-1377,-29540
chr3:32612760-32613050	chr3	+	32612819	32613097	True	NM_016141,NM_015442	chr3,chr3	-,+	DYNC1LI1,CNOT10	-453,113600
chr17:41858986-41860376	chr17	+	41859105	41860391	True	NM_004090,NM_001136483	chr17,chr17	-,+	DUSP3,C17orf105	-2737,-1353
chr1:241868766-241869048	chr1	+	241868889	241868991	True	NM_014322,NM_144625	chr1,chr1	-,+	OPN3,WDR64	-65188,-53363
chr12:6811104-6812106	chr12	+	6811149	6811755	True	NM_001164094,NM_153685	chr12,chr12	+,-	COPS7A,C12orf53	21394,-1337
chr13:77575948-77576454	chr13	+	77575968	77576454	True	NM_006493,NM_012158	chr13,chr13	+,-	CLN5,FBXL3	-9960,24927
chr9:114396054-114396759	chr9	+	114396053	114396743	True	NM_004125,NM_001015882,NR_037148,NR_034087	chr9,chr9,chr9,chr9	+,+,+,-	DNAJC25-GNG10,DNAJC25,DNAJC25,C9orf29	-2472,-2472,-2472,-20220
chr10:75932586-75933007	chr10	+	75932715	75932805	True	NM_001123,NM_001202449,NM_207012	chr10,chr10,chr10	+,+,-	ADK,ADK,AP3M1	3441,3441,-21889
chr4:172733695-172733980	chr4	+	172733802	172733916	True	NR_036751,NM_001034845	chr4,chr4	-,+	HSP90AA6P,GALNTL6	-1207667,658
chr7:44507188-44507716	chr7	+	44507271	44507612	True	NM_015332,NM_001003941	chr7,chr7	-,+	NUDCD3,OGDH	22823,138508
chr1:956907-957621	chr1	+	956958	957670	True	NM_005101,NM_001142467,NM_198576	chr1,chr1,chr1	+,-,+	ISG15,HES4,AGRN	-8162,-21406,-1506
chr1:217312020-217312566	chr1	+	217312048	217312428	True	NM_001134285,NM_138796	chr1,chr1	-,+	ESRRG,SPATA17	-951,492266
chrX:131352524-131353441	chrX	+	131352650	131353364	True	NM_021183,NM_001042452	chrX,chrX	-,+	RAP2C,MST4	-461,-195065
chr10:103895429-103896066	chr10	+	103895459	103896065	True	NM_001113407,NM_015062	chr10,chr10	-,+	LDB1,PPRC1	-15249,-2724
chr11:126873972-126875625	chr11	+	126874077	126875651	True	NM_001161707,NM_006278,NM_032531	chr11,chr11,chr11	-,+,-	KIRREL3,ST3GAL4,KIRREL3	-3311,-648032,-3311
chr17:71256760-71257176	chr17	+	71257051	71257135	True	NM_001129885,NM_017941	chr17,chr17	-,+	CPSF4L,C17orf80	934,-28326
chr9:131532649-131533457	chr9	+	131532739	131533441	True	NM_006336,NM_018201	chr9,chr9	-,+	ZER1,TBC1D13	807,16068
chr21:27895835-27896467	chr21	+	27895837	27896472	True	NM_002040,NM_052954	chr21,chr21	+,-	GABPA,CYYR1	-788566,49162
chr19:1593645-1594100	chr19	+	1593852	1594004	True	NR_026557,NM_003926	chr19,chr19	+,-	PLK5P,MBD3	-69825,-1200
chr1:230513968-230515116	chr1	+	230514039	230515099	True	NM_001145036,NM_024554	chr1,chr1	+,-	COG2,PGBD5	263102,-648
chr7:99613763-99614005	chr7	+	99613771	99614053	True	NM_001185,NM_003439	chr7,chr7	-,+	AZGP1,ZKSCAN1	-40036,-603
chr9:34614810-34616802	chr9	+	34614811	34616703	True	NM_000155,NM_024348,NM_148178,NM_148179,NM_007234	chr9,chr9,chr9,chr9,chr9	+,-,-,-,-	GALT,DCTN3,C9orf23,C9orf23,DCTN3	29931,3844,-2710,-2710,3844
chr18:15330781-15330995	chr18	+	15330811	15330975	True	NR_027417,NR_036153	chr18,chr18	-,+	LOC644669,MIR3156-2	-4893,-500697
chr19:11783057-11783955	chr19	+	11783425	11783817	True	NR_028594,NM_001080493	chr19,chr19	+,-	ZNF833P,ZNF823	995,65993
chr2:213378426-213379451	chr2	+	213378590	213379259	True	NM_001042599,NM_001025436	chr2,chr2	-,+	ERBB4,SPAG16	24154,769856
chr2:85662636-85662865	chr2	+	85662719	85662913	True	NM_001747,NM_198482	chr2,chr2	-,+	CAPG,SH2D6	-25043,-852
chr14:39583380-39583596	chr14	+	39583389	39583641	True	NM_006364,NM_003616,NM_001009183,NM_001009182	chr14,chr14,chr14,chr14	-,+,+,+	SEC23A,SIP1,SIP1,SIP1	-10952,-16,-16,-16
chr19:49115399-49115752	chr19	+	49115398	49115508	True	NM_001204159,NM_001204158,NM_000979,NM_017708,NM_133498,NM_020126	chr19,chr19,chr19,chr19,chr19,chr19	+,+,-,-,+,+	SPHK2,SPHK2,RPL18,FAM83E,SPACA4,SPHK2	7282,7039,6975,1236,-5449,7039
chr2:107123942-107124921	chr2	+	107123962	107124648	True	NM_001144013,NR_003506	chr2,chr2	-,+	RGPD3,PLGLA	-39161,-121252
chr2:107123942-107124921	chr2	-	87068177	87068481	False	NR_037931,NM_001178100	chr2,chr2	+,-	LOC100286979,CD8B	20466,20616
chr10:126853156-126853660	chr10	+	126853188	126853659	True	NM_001083914,NM_001329,NM_017580	chr10,chr10,chr10	-,-,+	CTBP2,CTBP2,ZRANB1	-3564,-4085,-222548
chr4:84406110-84406329	chr4	+	84406124	84406216	True	NM_139076,NM_016067	chr4,chr4	-,+	FAM175A,MRPS18C	124,-29057
chr2:175113687-175115592	chr2	+	175113853	175115584	True	NM_013341,NM_001011708,NM_001145250	chr2,chr2,chr2	-,-,+	OLA1,OLA1,SP9	-488,-488,84236
chrX:70314857-70315713	chrX	+	70314910	70315587	True	NM_005938,NM_001170931,NM_001025265	chrX,chrX,chrX	+,+,-	FOXO4,FOXO4,CXorf65	411,411,11101
chr12:8694061-8694629	chr12	+	8694327	8694495	True	NM_014358,NM_080387	chr12,chr12	-,+	CLEC4E,CLEC4D	-769,-28249
chr18:10696231-10696481	chr18	+	10696292	10696524	True	NM_003826,NM_022068	chr18,chr18	+,-	NAPG,FAM38B	-170470,452287
chr4:86396966-86398924	chr4	+	86397085	86398946	True	NM_001025616,NM_014991	chr4,chr4	+,-	ARHGAP24,WDFY3	-858,-509541
chr1:22326321-22326543	chr1	+	22326347	22326459	True	NM_005529,NM_005747	chr1,chr1	-,+	HSPG2,CELA3A	-62597,1689
chr1:22326321-22326543	chr1	+	22301421	22301473	False	NM_005529,NM_007352	chr1,chr1	-,+	HSPG2,CELA3B	-37671,1944
chr9:134302925-134303600	chr9	+	134303115	134303247	True	NM_001135954,NM_013318	chr9,chr9	-,+	UCK1,PRRC2B	103477,2229
chr6:112575272-112575964	chr6	+	112575338	112575946	True	NM_001013734,NM_001105209,NM_001105208,NM_002290,NM_001105207,NM_001105206	chr6,chr6,chr6,chr6,chr6,chr6	+,-,-,-,-,-	RFPL4B,LAMA4,LAMA4,LAMA4,LAMA4,LAMA4	92585,68,68,68,68,68
chr6:34544937-34545284	chr6	+	34544938	34545250	True	NM_001199583,NM_012391	chr6,chr6	+,-	PACSIN1,SPDEF	-62347,-20847
chr4:147561375-147561595	chr4	+	147561414	147561644	True	NM_032128,NM_004575	chr4,chr4	-,+	SLC10A7,POU4F2	-118291,-1420
chr11:47277377-47278372	chr11	+	47277510	47278285	True	NM_001130102,NM_001610,NM_001130101,NM_001131064,NM_005693	chr11,chr11,chr11,chr11,chr11	+,-,+,-,+	NR1H3,ACP2,NR1H3,ACP2,NR1H3	-7120,-7053,1211,-7053,1211
chr19:55288836-55290111	chr19	+	55289169	55290025	True	NM_014218,NM_001127255	chr19,chr19	+,-	KIR2DL1,NLRP7	-7958,168898
chr19:55288836-55290111	chr19	+	55274447	55274500	False	NM_014218,NM_001127255	chr19,chr19	+,-	KIR2DL1,NLRP7	6764,184426
chr20:44144063-44144686	chr20	+	44144143	44144671	True	NM_006103,NM_006652	chr20,chr20	+,-	WFDC2,SPINT3	-45801,107
chr11:60382721-60383254	chr11	+	60382780	60382948	True	NR_026946,NM_004778	chr11,chr11	+,-	C11orf64,GPR44	275,240546
chr13:39263581-39263845	chr13	+	39263650	39263845	True	NM_207361,NM_001144033	chr13,chr13	+,-	FREM2,STOML3	-2528,301202
chr18:19286827-19288539	chr18	+	19287977	19288171	True	NM_138340,NR_031565	chr18,chr18	-,+	ABHD3,MIR320C1	-3211,-24557
chr20:962794-963193	chr20	+	962892	963151	True	NM_001029871,NM_178578	chr20,chr20	-,+	RSPO4,PSMF1	19807,130754
chr22:21089466-21089808	chr22	+	21089470	21089682	True	NM_002650,NR_026815	chr22,chr22	-,+	PI4KA,TMEM191A	-515,-34119
chr22:21089466-21089808	chr22	+	21843298	21843434	False	NM_015094,NR_003700	chr22,chr22	+,-	HIC2,PI4KAP2	-71656,28396
chr22:21089466-21089808	chr22	+	20399322	20399534	False	NR_003563,NR_026919	chr22,chr22	-,+	PI4KAP1,LOC150197	-627,-205518
chr10:46630356-46631694	chr10	+	46630538	46631658	True	NM_015605,NM_001042387,NM_001042359,NM_001042396,NM_001042361,NM_001042391,NM_001042390,NM_001042393,NM_001042392,NM_001042395,NM_001042394,NM_001042397,NM_001042365,NR_027632,NM_001042364,NM_001042360,NM_001042358,NM_001042362,NM_001042363	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,-,-,-,-,-,-,-,-,-,+,-,-,-,-,-	PTPN20B,PTPN20A,PTPN20B,PTPN20A,PTPN20B,PTPN20A,PTPN20A,PTPN20A,PTPN20A,PTPN20A,PTPN20A,PTPN20A,PTPN20B,FAM35B,PTPN20B,PTPN20B,PTPN20B,PTPN20B,PTPN20B	9395,9395,9052,9395,9052,9052,9052,9052,9052,9395,9052,9395,9395,265982,9395,9052,9052,9052,9395
chr10:46630356-46631694	chr10	+	48817469	48818589	False	NM_015605,NM_001042387,NM_001042359,NM_153034,NM_001042358,NM_001042391,NM_001042390,NM_001042393,NM_001042392,NM_001042395,NM_001042394,NM_001042397,NM_001042396,NM_001042364,NM_001042365,NM_001042360,NM_001042361,NM_001042362,NM_001042363	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,+,-,-,-,-,-,-,-,-,-,-,-,-,-,-,-	PTPN20B,PTPN20A,PTPN20B,ZNF488,PTPN20B,PTPN20A,PTPN20A,PTPN20A,PTPN20A,PTPN20A,PTPN20A,PTPN20A,PTPN20A,PTPN20B,PTPN20B,PTPN20B,PTPN20B,PTPN20B,PTPN20B	9385,9385,9042,-462437,9042,9042,9042,9042,9042,9385,9042,9385,9385,9385,9385,9042,9042,9042,9385
chr10:46630356-46631694	chr10	+	49338004	49339124	False	NR_033172,NM_002750	chr10,chr10	-,+	FRMPD2P1,MAPK8	44166,270562
chr14:53256936-53257736	chr14	+	53256984	53257609	True	NM_198066,NM_145251	chr14,chr14	-,+	GNPNAT1,STYX	828,-60152
chr2:105044281-105045928	chr2	+	105044416	105045950	True	NR_015399,NR_037885	chr2,chr2	+,-	LOC150568,LOC100287010	4854,-19626
chr9:99660259-99660919	chr9	+	99660258	99660706	True	NR_028350,NM_001001662	chr9,chr9	+,-	LOC441454,ZNF782	10650,-43869
chr9:99660259-99660919	chr9	-	97121469	97121873	False	NM_017561,NM_032558	chr9,chr9	-,+	FAM22F,HIATL1	-30543,14959
chr7:45615335-45615545	chr7	+	45615355	45615575	True	NM_021116,NR_024271	chr7,chr7	+,-	ADCY1,SEPT7P2	-1281,193092
chr6:139094135-139094531	chr6	+	139094220	139094558	True	NM_015439,NM_020464	chr6,chr6	+,-	CCDC28A,NHSL1	98,-200552
chr14:20117043-20117344	chr14	+	20117046	20117134	True	NM_001197287,NM_172194	chr14,chr14	-,+	OR11H2,OR4Q3	65417,98452
chr5:140788486-140789203	chr5	+	140788485	140789113	True	NM_032090,NM_032101,NM_032100,NM_018921,NM_032089,NM_018927,NM_018926,NM_005642,NM_018913	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,+,+,+,-,+	PCDHGA10,PCDHGB7,PCDHGB6,PCDHGA9,PCDHGA9,PCDHGB7,PCDHGB6,TAF7,PCDHGA10	3629,8100,-768,-6018,-6018,8146,-768,-88134,3629
chr12:9156198-9157786	chr12	+	9156977	9157461	True	NM_002355,NM_005810	chr12,chr12	-,+	M6PR,KLRG1	-54725,-14820
chr6:134157260-134157833	chr6	+	134157327	134157600	True	NR_027030,NM_145176	chr6,chr6	+,-	MGC34034,SLC2A12	-15093,216240
chr8:22499845-22500703	chr8	+	22499948	22500690	True	NR_027715,NM_021174	chr8,chr8	-,+	FLJ14107,KIAA1967	-226,-37460
chr14:64107297-64107535	chr14	+	64107477	64107545	True	NM_080666,NM_001008726,NM_015180	chr14,chr14,chr14	-,-,+	WDR89,WDR89,SYNE2	1096,630,212137
chr4:5712590-5712803	chr4	+	5712636	5712750	True	NM_147127,NM_001166136,NM_153717	chr4,chr4,chr4	-,-,+	EVC2,EVC2,EVC	-2342,-1361,173
chr19:54806626-54807408	chr19	+	54806815	54807406	True	NM_001172654,NM_001013,NM_006865	chr19,chr19,chr19	-,+,-	LILRA3,RPS9,LILRA3	-2594,-102151,-2550
chr1:118148943-118149230	chr1	+	118148986	118149172	True	NM_017686,NM_017709	chr1,chr1	-,+	GDAP2,FAM46C	323180,-433
chr3:49824286-49824725	chr3	+	49824300	49824726	True	NM_153273,NM_001006115,NM_203370	chr3,chr3,chr3	-,-,+	IP6K1,IP6K1,C3orf54	-327,-327,15960
chr15:50841353-50842001	chr15	+	50841860	50842027	True	NM_005154,NM_203494	chr15,chr15	+,-	USP8,USP50	-125335,-2958
chr3:129120632-129122042	chr3	+	129120751	129121952	True	NR_003111,NM_018262,NR_002992	chr3,chr3,chr3	-,+,-	RPL32P3,IFT122,SNORA7B	-2469,37015,-4560
chr2:132248536-132249522	chr2	+	132248589	132249181	True	NM_001085365,NR_026922	chr2,chr2	-,+	MZT2A,LOC150776	933,1204
chr2:132248536-132249522	chr2	-	130940777	130940827	False	NM_017951,NM_025029,NM_017751,NR_033232,NR_033231,NR_033230,NM_001171083	chr2,chr2,chr2,chr2,chr2,chr2,chr2	-,+,-,-,-,-,-	SMPD4,MZT2B,SMPD4,SMPD4,SMPD4,SMPD4,SMPD4	-1447,-1327,-1447,-1447,-1447,-454,-1447
chr1:14691856-14692261	chr1	+	14692019	14692273	True	NM_015209,NR_027136	chr1,chr1	+,-	KAZN,C1orf126	232939,786739
chr19:43858757-43859356	chr19	+	43858785	43859186	True	NM_020406,NR_026881,NM_002784	chr19,chr19,chr19	+,+,-	CD177,PRG1,PSG9	-1021,-5638,-85103
chr19:43858757-43859356	chr19	-	43883871	43883922	False	NM_031451,NM_014400	chr19,chr19	+,-	TEX101,LYPD3	8840,85960
chr8:146126755-146127072	chr8	+	146126787	146127009	True	NM_001109689,NM_021061,NM_003416	chr8,chr8,chr8	-,-,+	ZNF250,ZNF250,ZNF7	59,59,-73935
chr16:2008931-2009336	chr16	+	2009127	2009357	True	NR_003142,NM_174903,NM_005061,NM_002952,NR_002327,NR_002326,NR_003020,NM_004548	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,-,-,-,-,+,+	SNHG9,RNF151,RPL3L,RPS2,SNORA10,SNORA64,SNORA78,NDUFB10	5639,7517,-4448,5520,3160,3800,5827,159
chr13:50201814-50202500	chr13	+	50202255	50202457	True	NM_138450,NM_018191	chr13,chr13	+,-	ARL11,RCBTB1	-23,-42536
chr19:50528592-50529952	chr19	+	50528615	50529547	True	NM_001025778,NM_001006656,NM_016440,NM_015428	chr19,chr19,chr19,chr19	-,+,-,+	VRK3,ZNF473,VRK3,ZNF473	-56,79,-56,79
chr19:46089251-46089854	chr19	+	46089421	46089719	True	NM_003370,NM_001017989,NM_025136	chr19,chr19,chr19	+,-,-	VASP,OPA3,OPA3	-78784,-1299,-1299
chr20:57465491-57465722	chr20	+	57465584	57465726	True	NM_001077489,NM_001077488,NM_000516,NR_002785,NR_003259,NM_080426	chr20,chr20,chr20,chr20,chr20,chr20	+,+,+,-,+,+	GNAS,GNAS,GNAS,GNAS-AS1,GNAS,GNAS	699,699,699,-39626,-1455,699
chr9:123638905-123639162	chr9	+	123638982	123639100	True	NM_015651,NR_024408,NM_001009936	chr9,chr9,chr9	-,+,-	PHF19,LOC253039,PHF19	556,-33713,556
chr21:36419972-36420784	chr21	+	36420208	36420806	True	NR_024351,NR_026812,NM_001754	chr21,chr21,chr21	+,-,-	NCRNA00160,C21orf96,RUNX1	-324155,-8485,839
chr7:99934268-99934626	chr7	+	99934444	99934525	True	NR_036570,NR_003613,NR_036569	chr7,chr7,chr7	+,-,+	PILRB,PMS2P1,PILRB	-818,-514,-818
chr2:228019764-228020830	chr2	+	228019834	228020720	True	NM_000091,NM_000092	chr2,chr2	+,-	COL4A3,COL4A4	8560,8605
chr12:70082883-70083094	chr12	+	70082885	70083117	True	NM_022456,NM_152439	chr12,chr12	+,-	RAB3IP,BEST3	49513,-11
chr17:44075951-44076708	chr17_ctg5_hap1	-	791199	791758	False	NM_001007532,NR_024559	chr17_ctg5_hap1,chr17_ctg5_hap1	-,+	STH,LOC100128977	-66,102935
chr17:44075951-44076708	chr17	+	44075990	44076684	True	NM_001007532,NR_024559	chr17,chr17	+,-	STH,LOC100128977	66,-103111
chr5:146619153-146620896	chr5	+	146619158	146620566	True	NM_181678,NM_145001,NM_001112724	chr5,chr5,chr5	-,+,+	PPP2R2B,STK32A,STK32A	-158125,-4630,-4630
chr20:32274469-32275009	chr20	+	32274506	32275000	True	NM_005225,NM_001024675	chr20,chr20	-,+	E2F1,C20orf134	-296,-20253
chr7:131013187-131013467	chr7	+	131013245	131013483	True	NR_015431,NM_013255	chr7,chr7	-,+	FLJ43663,MKLN1	-219683,-708
chr11:61957338-61957693	chr11	+	61957345	61957453	True	NM_006552,NM_206998	chr11,chr11	+,-	SCGB1D1,SCGB1D4	256,109133
chr18:55290276-55290775	chr18	+	55290642	55290785	True	NM_004852,NM_004539	chr18,chr18	+,-	ONECUT2,NARS	-187776,-1465
chr3:167787083-167788103	chr3	+	167787083	167787872	True	NM_014498,NR_033843	chr3,chr3	-,+	GOLIM4,LOC646168	25595,-173401
chr17:5973091-5973443	chr17	+	5973135	5973431	True	NM_001033054,NM_015253	chr17,chr17	-,+	AIPL1,WSCD1	365138,502
chr20:31365864-31366871	chr20	+	31366181	31366831	True	NM_175850,NM_053041	chr20,chr20	+,-	DNMT3B,COMMD7	826,-34367
chr17:2305589-2305941	chr17	+	2305627	2305973	True	NM_020310,NM_001098509	chr17,chr17	-,+	MNT,SGSM2	-1369,-64870
chr13:30424612-30425795	chr13	+	30424830	30425674	True	NM_007106,NR_033889	chr13,chr13	-,+	UBL3,LOC440131	-10,84993
chrX:128703249-128703861	chrX	+	128703253	128703810	True	NM_139035,NM_001587	chrX,chrX	-,+	SMARCA1,OCRL	-45793,-29052
chr6:39276274-39276954	chr6	+	39276392	39276762	True	NM_031460,NM_001135111,NM_002062	chr6,chr6,chr6	-,-,+	KCNK17,KCNK17,GLP1R	5524,5525,-259894
chr1:52831522-52831764	chr1	+	52831526	52831786	True	NM_032864,NM_032449	chr1,chr1	+,-	PRPF38A,CC2D1B	38432,141
chr7:28319362-28319587	chr7	+	28319508	28319626	True	NM_182899,NM_175061	chr7,chr7	+,-	CREB5,JAZF1	19313,-99071
chr19:4541660-4542494	chr19	+	4541659	4541837	True	NM_052972,NM_032631,NM_001013706	chr19,chr19,chr19	-,+,-	LRG1,HDGFRP2,PLIN5	-1623,-69455,-6451
chr11:93434892-93436341	chr11	+	93435058	93436098	True	NR_002569,NR_003028	chr11,chr11	+,-	SCARNA9,SNORA25	18581,27776
chr11:18812075-18812502	chr11	+	18812076	18812485	True	NM_153347,NM_001039970,NM_032781,NM_006906	chr11,chr11,chr11,chr11	+,-,-,-	TMEM86A,PTPN5,PTPN5,PTPN5	-91776,954,954,954
chr16:30087721-30089018	chr16	+	30087726	30089016	True	NM_002720,NM_004608	chr16,chr16	+,-	PPP4C,TBX6	-393,14239
chr22:23521159-23522204	chr22	+	23521319	23522225	True	NM_004327,NM_021574,NM_014433	chr22,chr22,chr22	+,+,-	BCR,BCR,RTDR1	326,326,-37078
chr16:70285717-70285937	chr16	+	70285743	70285907	True	NM_058219,NM_001014449	chr16,chr16	-,+	EXOSC6,DDX19B	-2,47164
chr10:81109724-81110462	chr10	+	81109788	81110510	True	NM_005729,NM_153367	chr10,chr10	+,-	PPIF,ZCCHC24	-2619,94923
chr5:156995992-156997159	chr5	+	156996093	156996949	True	NM_001145132,NM_033274	chr5,chr5	+,-	C5orf52,ADAM19	101611,5884
chr19:48545990-48547318	chr19	+	48546143	48547021	True	NM_022142,NM_019855	chr19,chr19	+,-	ELSPBP1,CABP5	-48295,333
chr4:39697262-39698230	chr4	+	39697293	39697977	True	NM_005339,NM_174921,NM_001111112,NM_001111113	chr4,chr4,chr4,chr4	+,-,+,+	UBE2K,C4orf34,UBE2K,UBE2K	1686,-56812,1686,1686
chr10:115803304-115803518	chr10	+	115803391	115803463	True	NM_000684,NR_031747	chr10,chr10	+,-	ADRB1,MIR2110	342,130525
chr17:44319603-44320997	chr17_ctg5_hap1	-	546452	546891	False	NM_001193465,NR_034172	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	KIAA1267,LOC644246	16606,48552
chr17:44319603-44320997	chr17_ctg5_hap1	+	1187516	1187955	False	NR_026901,NR_037772	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LOC644172,CRHR1	483,-17063
chr17:44319603-44320997	chr17_ctg5_hap1	+	1407076	1407515	False	NR_002940,NM_016632	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LRRC37A4,ARL17A	73861,106427
chr17:44319603-44320997	chr17	+	44320013	44320452	True	NM_001193465,NR_034172	chr17,chr17	-,+	KIAA1267,LOC644246	-17273,-49132
chr17:44319603-44320997	chr17	-	43680227	43680666	False	NR_026901,NR_037772	chr17,chr17	-,+	LOC644172,CRHR1	-479,17043
chr7:83261325-83263043	chr7	+	83261485	83263003	True	NM_001178129,NM_001127444	chr7,chr7	-,+	SEMA3E,CD36	7794,-2985785
chr11:61159488-61159846	chr11	+	61159503	61159820	True	NM_001173990,NM_001173991,NM_153611,NM_016499	chr11,chr11,chr11,chr11	+,+,-,+	TMEM216,TMEM216,CYBASC3,TMEM216	11,11,-29748,44
chr8:82754515-82754834	chr8	+	82754804	82754882	True	NM_022133,NM_152284,NM_152836,NM_152837	chr8,chr8,chr8,chr8	-,+,-,-	SNX16,CHMP4C,SNX16,SNX16	-283,-110167,-283,-283
chr17:4336443-4336763	chr17	+	4336461	4336801	True	NM_003342,NM_182538	chr17,chr17	-,+	UBE2G1,SPNS3	-66492,417
chr17:4485173-4486198	chr17	+	4485228	4486088	True	NM_198501,NM_001114974,NM_153338	chr17,chr17,chr17	+,+,-	SMTNL2,SMTNL2,GGT6	1187,1745,-21352
chr4:100755232-100756372	chr4	+	100755356	100756112	True	NM_021970,NM_014395	chr4,chr4	-,+	LAMTOR3,DAPP1	59641,-17435
chr6:43042418-43043203	chr6	+	43042516	43043068	True	NM_002821,NM_015950,NM_152882,NM_152881,NM_152880	chr6,chr6,chr6,chr6,chr6	+,-,+,+,+	PTK7,MRPL2,PTK7,PTK7,PTK7	960,-15274,960,960,960
chr12:122151065-122151515	chr12	+	122151132	122151476	True	NM_173855,NM_001080825	chr12,chr12	-,+	MORN3,TMEM120B	-43572,-525
chr17:43395747-43397741	chr17_ctg5_hap1	+	10963	12244	False	NM_001159330,NM_001113738	chr17_ctg5_hap1,chr17_ctg5_hap1	-,+	ARHGAP27,ARL17A	86394,183476
chr17:43395747-43397741	chr17	+	43395827	43397108	True	NM_003954,NR_024435	chr17,chr17	-,+	MAP3K14,LOC100133991	-1413,-56320
chr15:75315872-75316157	chr15	+	75315876	75316156	True	NM_017793,NM_021823	chr15,chr15	-,+	RPP25,PPCDC	-66101,0
chr13:50567799-50569329	chr13	+	50567963	50568641	True	NM_005798,NM_052811,NR_037407,NM_001007278,NM_213590	chr13,chr13,chr13,chr13,chr13	+,+,-,+,+	TRIM13,TRIM13,MIR3613,TRIM13,TRIM13	2501,2501,2046,2501,2501
chr2:96932198-96933807	chr2	+	96932372	96933781	True	NM_004804,NM_017849,NM_001193304	chr2,chr2,chr2	+,-,-	CIAO1,TMEM127,TMEM127	-539,-621,-621
chr10:35624587-35624888	chr10	+	35624639	35624755	True	NM_001198777,NM_145012	chr10,chr10	-,+	CUL2,CCNY	-245069,1046
chr5:133453212-133454054	chr5	+	133453236	133454000	True	NM_001134851,NR_033449,NM_003202,NM_213648,NM_006930,NM_201632,NM_201634	chr5,chr5,chr5,chr5,chr5,chr5,chr5	+,+,+,+,-,+,+	TCF7,TCF7,TCF7,TCF7,SKP1,TCF7,TCF7	-1989,-1937,-2885,-1989,58774,-1989,-1989
chr9:140338717-140338955	chr9	+	140338885	140338955	True	NM_001033113,NM_006647,NM_198585	chr9,chr9,chr9	-,+,-	ENTPD8,NOXA1,ENTPD8	-2984,-21090,-2984
chr1:28201886-28202302	chr1	+	28201912	28202197	True	NM_001039477,NM_004848,NM_002946,NM_001105556	chr1,chr1,chr1,chr1	+,+,-,+	C1orf38,C1orf38,RPA2,C1orf38	-2908,-2908,39100,-2908
chr17:46509713-46511119	chr17	+	46510237	46511147	True	NM_001075099,NR_033201,NM_003726	chr17,chr17,chr17	-,+,-	SKAP1,LOC404266,SKAP1	-2643,156675,-2643
chr2:53998371-53999402	chr2	+	53998838	53999322	True	NM_001201965,NM_001008708	chr2,chr2	-,+	ASB3,CHAC2	14719,-3966
chr15:25442569-25442883	chr15	+	25442705	25442903	True	NR_003344,NR_003358,NR_003313,NR_003312,NR_003311,NR_003310,NM_130838,NR_003297,NR_003308,NR_003309,NR_003351,NR_003301,NR_003302,NR_003303,NR_003304,NR_003305,NR_003306,NR_003307	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,-,+,+,+,+,+,+,+,+,+,+,+	SNORD115-29,SNORD115-43,SNORD115-21,SNORD115-20,SNORD115-19,SNORD115-18,UBE3A,SNORD115-5,SNORD115-16,SNORD115-17,SNORD115-36,SNORD115-9,SNORD115-10,SNORD115-11,SNORD115-12,SNORD115-13,SNORD115-14,SNORD115-15	-8195,-8195,8505,8505,3566,3566,207800,-6190,1691,3566,-8195,-6193,-6193,-8195,-6193,-4288,-2688,8505
chr11:67440850-67441515	chr11	+	67440855	67441501	True	NM_007103,NM_000695,NM_001031615	chr11,chr11,chr11	+,-,-	NDUFV1,ALDH3B2,ALDH3B2	-66583,651,7234
chr9:140097966-140099320	chr9	+	140098265	140099341	True	NM_001144028,NM_001128228,NM_001144026,NM_001144027,NM_053045,NM_014434	chr9,chr9,chr9,chr9,chr9,chr9	+,-,+,+,-,+	NDOR1,TPRN,NDOR1,NDOR1,TMEM203,NDOR1	777,-3102,777,777,799,777
chr11:68750977-68752407	chr11	+	68751126	68752086	True	NM_139075,NM_198923	chr11,chr11	+,-	TPCN2,MRGPRD	64263,-2671
chr19:57947082-57949014	chr19	+	57947269	57948566	True	NM_020633,NM_001023561	chr19,chr19	-,+	VN1R1,ZNF749	19592,-627
chr3:125577903-125579252	chr3	+	125577940	125579277	True	NR_024250,NR_031687	chr3,chr3	+,-	LOC100125556,MIR548I1	56166,-68545
chr3:27411138-27411627	chr3	+	27411140	27411652	True	NM_052953,NM_199347	chr3,chr3	+,-	LRRC3B,NEK10	-746891,-228
chr7:48966276-48967705	chr7	+	48966529	48967740	True	NR_003595,NM_152782	chr7,chr7	+,-	CDC14C,SUN3	-2424,-897813
chr7:48966276-48967705	chr7	-	48884411	48884461	False	NR_003595,NM_152782	chr7,chr7	+,-	CDC14C,SUN3	79695,-815695
chr15:25297001-25297885	chr15	+	25297003	25297915	True	NR_003317,NR_003316,NR_003320,NR_003324,NR_003322,NR_001289,NR_003318,NM_130838,NR_003319,NR_001295	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,-,+,+	SNORD116-2,SNORD116-1,SNORD116-5,SNORD116-9,SNORD116-7,SNORD109B,SNORD116-3,UBE3A,SNORD116-4,SNORD109A	1440,-431,9563,4090,9563,-9933,4090,352788,6768,-9933
chr3:181352821-181353073	chr3	+	181352935	181353102	True	NR_033725,NR_004053	chr3,chr3	-,+	DNAJC19,SOX2OT	-645373,-24848
chr7:102988368-102988574	chr7	+	102988374	102988616	True	NM_001204453,NM_001129887,NM_002803,NM_014377	chr7,chr7,chr7,chr7	+,-,+,-	PSMC2,DNAJC2,PSMC2,DNAJC2	-455,-3054,-455,-3054
chr5:99398657-99399573	chr5	+	99398658	99398928	True	NM_198507,NR_027503	chr5,chr5	+,-	FAM174A,LOC100133050	472195,325080
chr5:99398657-99399573	chr5	+	99712153	99712345	False	NM_198507,NR_027503	chr5,chr5	+,-	FAM174A,LOC100133050	158778,11805
chr5:73935412-73935724	chr5	+	73935451	73935691	True	NM_003633,NM_000521	chr5,chr5	-,+	ENC1,HEXB	1608,45277
chr6:105304603-105305686	chr6	+	105304672	105305355	True	NM_001004317,NM_020771	chr6,chr6	+,-	LIN28B,HACE1	99567,2496
chr17:3211679-3212493	chr17	+	3211693	3212539	True	NM_002550,NR_024128	chr17,chr17	-,+	OR3A1,OR3A4	-15817,999
chr11:16400934-16402470	chr11	+	16401383	16402487	True	NM_001145819,NM_014267	chr11,chr11	-,+	SOX6,C11orf58	21976,357660
chr14:78086584-78087543	chr14	+	78086583	78087159	True	NM_031210,NM_004863	chr14,chr14	+,-	C14orf156,SPTLC2	87265,-3473
chr2:11296271-11296771	chr2	+	11296343	11296505	True	NM_152391,NM_004850	chr2,chr2	+,-	PQLC3,ROCK2	-862,188256
chrX:129247349-129248900	chrX	+	129247726	129248750	True	NM_001127197,NM_001421,NM_004794	chrX,chrX,chrX	-,-,+	ELF4,ELF4,RAB33A	-3038,-3251,57022
chr1:20617281-20617483	chr1	+	20617346	20617444	True	NM_001105572,NM_001039500	chr1,chr1	-,+	PLA2G2C,VWA5B1	-115659,-9
chr7:128117010-128117286	chr7	+	128117110	128117282	True	NM_183243,NM_018396	chr7,chr7	-,+	IMPDH1,METTL2B	-67074,-378
chr20:32028183-32028673	chr20	+	32028640	32028722	True	NM_003098,NM_001032999	chr20,chr20	-,+	SNTA1,CBFA2T2	3026,49205
chr19:1605607-1605964	chr19	+	1605687	1605967	True	NM_006830,NR_026557	chr19,chr19	-,+	UQCR11,PLK5P	-204,-81660
chr12:54813229-54813492	chr12	+	54813306	54813376	True	NM_005337,NM_002205	chr12,chr12	+,-	NCKAP1L,ITGA5	78118,-256
chr20:32851293-32852808	chr20	+	32852078	32852444	True	NM_001672,NM_000687	chr20,chr20	+,-	ASIP,AHCY	-3958,38833
chr19:33625775-33626482	chr19	+	33626050	33626336	True	NM_173479,NM_033103	chr19,chr19	+,-	WDR88,RHPN2	-3104,-70226
chr14:55033569-55034025	chr14	+	55033597	55033925	True	NM_004124,NM_015589,NM_001161576	chr14,chr14,chr14	-,+,+	GMFB,SAMD4A,SAMD4A	-77853,711,711
chr5:1632132-1632378	chr5	+	1632221	1632298	True	NR_003713,NM_004553	chr5,chr5	-,+	LOC728613,NDUFS6	1883,169197
chr1:165324808-165325237	chr1	+	165324822	165325246	True	NM_177398,NM_001174069,NM_001005214	chr1,chr1,chr1	-,-,+	LMX1A,LMX1A,LRRC52	756,282,188231
chr22:39380055-39381933	chr22	+	39380075	39381866	True	NM_014292,NM_004900	chr22,chr22	-,+	CBX6,APOBEC3B	-111817,-1721
chr22:39380055-39381933	chr22	+	39418822	39418872	False	NM_152426,NM_175709,NM_014508	chr22,chr22,chr22	+,-,+	APOBEC3D,CBX7,APOBEC3C	-1755,129716,-8608
chr3:63496294-63497266	chr3	+	63496350	63497308	True	NM_025075,NM_144642	chr3,chr3	-,+	THOC7,SYNPR	352339,-67655
chr8:146127192-146127487	chr8	+	146127207	146127439	True	NM_001109689,NM_021061,NM_003416	chr8,chr8,chr8	-,-,+	ZNF250,ZNF250,ZNF7	-361,-361,-74355
chr1:53386080-53386866	chr1	+	53386261	53386736	True	NM_001198962,NM_002979,NM_001198961,NM_001193617,NM_001193600,NM_018281,NM_001193599,NM_001007098	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,+,-,+,+,-,+,+	ECHDC2,SCP2,ECHDC2,SCP2,SCP2,ECHDC2,SCP2,SCP2	760,6164,760,6164,6164,760,6164,6164
chr5:148784806-148785185	chr5	+	148784812	148785200	True	NR_027180,NM_014443	chr5,chr5	+,-	LOC728264,IL17B	1239,-25974
chr15:59665078-59665571	chr15	+	59665132	59665382	True	NM_152450,NM_004998	chr15,chr15	+,-	FAM81A,MYO1E	64989,-61
chr10:91149902-91151266	chr10	+	91150053	91150877	True	NM_001548,NM_000235	chr10,chr10	+,-	IFIT1,LIPA	1444,-138393
chr10:6779576-6780342	chr10	+	6779689	6780375	True	NR_036503,NM_006257	chr10,chr10	+,-	LOC439949,PRKCQ	-157353,-157451
chr14:105633100-105633609	chr14	+	105633135	105633625	True	NM_033271,NM_145159,NM_002226	chr14,chr14,chr14	+,-,-	BTBD6,JAG2,JAG2	81253,1586,1586
chr11:68227981-68228316	chr11	+	68228018	68228264	True	NM_018312,NM_001164164,NM_001164161,NM_001164160,NM_001164163,NM_001164162,NM_022338	chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,+,-	PPP6R3,PPP6R3,PPP6R3,PPP6R3,PPP6R3,PPP6R3,C11orf24	-55,-55,-55,-55,-55,-55,-188549
chr1:190422509-190423816	chr1	+	190422745	190423845	True	NM_199051,NR_033922	chr1,chr1	-,+	FAM5C,LOC440704	22964,170174
chr10:95518166-95518430	chr10	+	95518212	95518459	True	NM_005097,NM_145246	chr10,chr10	+,-	LGI1,FRA10AC1	-697,-55883
chr2:165479648-165481213	chr2	+	165479674	165481222	True	NM_001040142,NM_004490	chr2,chr2	+,-	SCN2A,GRB14	614689,-1314
chr7:73589902-73590658	chr7	+	73589959	73590424	True	NM_002914,NM_031992,NM_022170	chr7,chr7,chr7	-,+,+	RFC2,EIF4H,EIF4H	78372,-1311,-1311
chr16:56228522-56229837	chr16	+	56228615	56229884	True	NM_020988,NR_026889,NR_027078,NM_138736	chr16,chr16,chr16,chr16	+,-,-,+	GNAO1,DKFZP434H168,LOC283856,GNAO1	-3415,-178,-3609,-3415
chr2:73142643-73142974	chr2	+	73142721	73142820	True	NM_015189,NM_004097	chr2,chr2	-,+	EXOC6B,EMX1	-89544,1783
chr12:89916663-89917622	chr12	+	89916667	89917645	True	NR_037660,NM_172240,NM_001199781,NR_037659,NM_001199782,NR_028138,NM_003774,NM_001199777	chr12,chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,-,-,-,-,+,-,-	POC1B,POC1B,POC1B-GALNT4,POC1B,POC1B-GALNT4,LOC338758,GALNT4,POC1B	1749,2444,2444,2444,2444,185086,988,1749
chrX:106961539-106961828	chrX	+	106961539	106961871	True	NM_001015881,NM_002764,NM_004089	chrX,chrX,chrX	-,+,-	TSC22D3,PRPS1,TSC22D3	-1828,-89936,-1248
chr6:166401121-166401534	chr6	+	166401148	166401568	True	NR_026860,NR_026861,NR_027284	chr6,chr6,chr6	-,-,+	C6orf176,C6orf176,LOC441177	9,9,-160
chr1:37985151-37986044	chr1	+	37985249	37985631	True	NM_022756,NM_003462	chr1,chr1	-,+	MEAF6,DNALI1	-4885,36888
chr11:46724375-46725576	chr11	+	46724398	46725222	True	NM_004308,NM_001184751,NM_024741	chr11,chr11,chr11	-,+,+	ARHGAP1,ZNF408,ZNF408	-2278,-1805,-2132
chr11:6521089-6521941	chr11	+	6521140	6521969	True	NM_173589,NM_144666,NM_012402	chr11,chr11,chr11	+,+,-	DNHD1,DNHD1,ARFIP2	-2673,-2673,-18545
chr1:164523918-164524774	chr1	+	164523918	164524568	True	NM_002585,NM_001174069,NM_001204963,NM_001204961	chr1,chr1,chr1,chr1	+,-,+,+	PBX1,LMX1A,PBX1,PBX1	4028,800969,4028,4028
chr2:86955720-86956169	chr2	+	86955722	86956222	True	NM_022780,NM_001198954	chr2,chr2	+,-	RMND5A,RNF103-VPS24	-8361,-7477
chr2:86955720-86956169	chr2	-	87294755	87295258	False	NR_026846,NM_001024457	chr2,chr2	-,+	LOC285074,RGPD1	8330,-150072
chr13:21631675-21633376	chr13	+	21631996	21633188	True	NM_014572,NM_005870	chr13,chr13	-,+	LATS2,SAP18	2591,81464
chr22:30956704-30957117	chr22	+	30956719	30956789	True	NM_004861,NM_000355	chr22,chr22	-,+	GAL3ST1,TCN2	4137,46280
chr22:25082932-25083289	chr22	+	25082940	25083326	True	NR_024593,NR_024494	chr22,chr22	-,+	POM121L10P,BCRP3	-27826,-54109
chr4:165897413-165898584	chr4	+	165897531	165898575	True	NM_153027,NM_001012414	chr4,chr4	+,-	C4orf39,TRIM61	-19482,293
chr4:159591266-159592652	chr4	+	159591581	159592491	True	NM_001008393,NM_004453	chr4,chr4	-,+	C4orf46,ETFDH	761,785
chr5:38577522-38578399	chr5	+	38577559	38578198	True	NM_002310,NM_182801	chr5,chr5	-,+	LIFR,EGFLAM	17367,-131974
chr6:150283764-150284686	chr6	+	150283845	150284585	True	NM_025218,NM_001001788	chr6,chr6	+,-	ULBP1,RAET1G	557,-39631
chr7:50133411-50134923	chr7	+	50133493	50134430	True	NM_001161834,NM_001159878,NM_007009	chr7,chr7,chr7	+,-,-	C7orf72,ZPBP,ZPBP	1251,-633,-633
chrX:12155637-12155916	chrX	+	12155769	12155902	True	NM_006125,NM_014728	chrX,chrX	-,+	ARHGAP6,FRMPD4	-471948,682
chr18:44338145-44338495	chr18	+	44338153	44338375	True	NM_013305,NM_031303	chr18,chr18	-,+	ST8SIA5,KATNAL2	-1114,188411
chr19:9782410-9783546	chr19	+	9782421	9783453	True	NM_001048241,NM_017656,NM_001130032,NM_001130031	chr19,chr19,chr19,chr19	+,-,-,-	UBL5,ZNF562,ZNF562,ZNF562	155114,2381,2381,2381
chr19:51859182-51859900	chr19	+	51859462	51859948	True	NM_001985,NM_001014763,NM_001101372	chr19,chr19,chr19	-,-,+	ETFB,ETFB,IGLON5	9774,-1366,-44415
chr6:135273213-135273415	chr6	+	135273261	135273375	True	NM_170771,NM_022568,NM_001193480,NM_005375	chr6,chr6,chr6,chr6	-,-,-,+	ALDH8A1,ALDH8A1,ALDH8A1,MYB	-2001,-2001,-2001,229077
chrX:119695225-119695550	chrX	+	119695225	119695606	True	NM_014060,NM_001079872	chrX,chrX	+,-	MCTS1,CUL4B	42137,-408
chr5:180288364-180288589	chr5	+	180288510	180288574	True	NR_027183,NM_152283,NM_001172638	chr5,chr5,chr5	+,-,-	LOC729678,ZFP62,ZFP62	-31606,-224,-224
chr11:62645482-62647288	chr11	+	62645680	62647267	True	NR_037193,NR_003098,NM_001013251	chr11,chr11,chr11	+,-,+	SLC3A2,SNHG1,SLC3A2	1903,-22320,1076
chr7:99685910-99686219	chr7	+	99686151	99686217	True	NM_017715,NR_029831,NR_029498,NR_029510,NM_032924,NM_006833	chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,+	ZNF3,MIR106B,MIR25,MIR93,ZNF3,COPS6	-6780,5530,5099,5303,-6780,365
chr1:164529147-164529990	chr1	+	164529195	164530027	True	NM_002585,NM_001174069,NM_001204963,NM_001204961	chr1,chr1,chr1,chr1	+,-,+,+	PBX1,LMX1A,PBX1,PBX1	-649,795501,-649,-649
chr5:131395652-131395908	chr5	+	131395676	131395942	True	NM_000588,NM_001205250	chr5,chr5	+,-	IL3,ACSL6	404,-47915
chr20:13951198-13952754	chr20	+	13951699	13952768	True	NM_080676,NM_025229	chr20,chr20	+,-	MACROD2,SEL1L2	23377,18547
chr10:129707741-129709067	chr10	+	129707914	129709012	True	NM_006504,NM_152311	chr10,chr10	+,-	PTPRE,CLRN3	-2647,-16703
chr17:73040730-73041198	chr17	+	73040823	73041094	True	NM_015353,NM_006356,NM_001003785	chr17,chr17,chr17	+,-,-	KCTD2,ATP5H,ATP5H	2184,2031,2031
chr19:43588112-43589385	chr19	+	43588973	43589409	True	NR_036584,NM_031246	chr19,chr19	+,-	LOC100289650,PSG2	-263009,-2080
chr19:44220120-44220360	chr19	+	44220135	44220243	True	NM_019108,NM_019612	chr19,chr19	-,+	C19orf61,IRGC	38949,-6
chr17:9480361-9481128	chr17	+	9480493	9481094	True	NR_033656,NM_001080556,NM_145054,NM_004853	chr17,chr17,chr17,chr17	-,+,+,-	STX8,WDR16,WDR16,STX8	-1218,-600,-600,-1218
chr8:33329065-33330025	chr8	+	33329312	33329992	True	NM_032509,NM_032664	chr8,chr8	+,-	MAK16,FUT10	12692,722
chr20:48534433-48535947	chr20	+	48534746	48535923	True	NM_006038,NM_001135773,NM_018683	chr20,chr20,chr20	-,-,+	SPATA2,SPATA2,RNF114	-2666,-4470,16990
chr19:54695280-54695639	chr19	+	54695371	54695585	True	NM_001146056,NM_001146082,NM_001146083,NM_024075,NM_024298,NM_001013,NM_001077446	chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,+,-,+,+	MBOAT7,MBOAT7,MBOAT7,TSEN34,MBOAT7,RPS9,TSEN34	-1638,-1638,-1638,-1303,-1638,9140,-318
chr2:216180532-216181576	chr2	+	216180742	216181263	True	NM_002026,NM_004044	chr2,chr2	-,+	FN1,ATIC	119578,-4121
chr4:48782542-48782829	chr4	+	48782564	48782858	True	NM_001079840,NM_015030	chr4,chr4	+,-	OCIAD1,FRYL	50201,-248
chr3:192117764-192118198	chr3	+	192117873	192118072	True	NM_020386,NM_021032	chr3,chr3	+,-	HRASLS,FGF12	840845,8825
chr14:104029169-104029419	chr14	+	104029204	104029456	True	NM_032374,NM_001015049,NM_001015048,NM_004873	chr14,chr14,chr14,chr14	+,-,-,-	C14orf153,BAG5,BAG5,BAG5	14,-549,-53,-549
chr17:25666811-25668292	chr17	+	25667084	25668329	True	NM_000625,NM_134265	chr17,chr17	-,+	NOS2,WSB1	459276,-46029
chr7:47694921-47695588	chr7	+	47695027	47695585	True	NM_022748,NM_001123065	chr7,chr7	-,+	TNS3,C7orf65	-73285,-236
chr6:141195667-141197375	chr6	+	141196053	141197389	True	NR_037441,NM_002511	chr6,chr6	+,-	MIR3668,NMBR	-669715,1212603
chr11:18654054-18655529	chr11	+	18654369	18655507	True	NM_153347,NM_194285	chr11,chr11	+,-	TMEM86A,SPTY2D1	64843,563
chr19:47760548-47760793	chr19	+	47760769	47760829	True	NM_015603,NM_001127242	chr19,chr19	+,-	CCDC9,BBC3	-1089,-24746
chr5:153579601-153581343	chr5	+	153579867	153581132	True	NM_018691,NM_198321	chr5,chr5	-,+	FAM114A2,GALNT10	-161370,-9623
chr9:140769913-140770172	chr9	+	140769945	140770215	True	NM_032937,NM_000718	chr9,chr9	-,+	C9orf37,CACNA1B	-256637,2025
chr8:145046907-145047272	chr8	+	145047125	145047289	True	NM_201378,NM_000837,NM_000445	chr8,chr8,chr8	-,+,-	PLEC,GRINA,PLEC	458,16936,3674
chr16:4851944-4852151	chr16	+	4851984	4852140	True	NM_024589,NR_029455	chr16,chr16	-,+	ROGDI,LOC440335	584,-6656
chr10:46993611-46993817	chr10	+	46993709	46993839	True	NM_014696,NM_031912	chr10,chr10	+,-	GPRIN2,SYT15	-214,-23108
chr12:13245153-13245816	chr12	+	13245241	13245714	True	NM_153823,NM_031289,NM_020853	chr12,chr12,chr12	-,-,+	GSG1,GSG1,KIAA1467	3060,3060,-47977
chr1:152082757-152083255	chr1	+	152082795	152083301	True	NR_024237,NM_007113	chr1,chr1	+,-	LOC100132111,TCHH	-271901,3305
chr9:138412315-138412550	chr9	+	138412327	138412507	True	NM_144654,NM_002297	chr9,chr9	-,+	C9orf116,LCN1	-20566,778
chr9:138412315-138412550	chr9	+	136183607	136183657	False	NM_000972,NM_006753	chr9,chr9	+,-	RPL7A,SURF6	31411,19440
chr17:10267793-10269788	chr17	+	10267954	10269409	True	NM_003802,NM_020233	chr17,chr17	-,+	MYH13,C17orf48	6963,331517
chr15:42066202-42066988	chr15	+	42066206	42066526	True	NR_036195,NM_014994,NM_001128608	chr15,chr15,chr15	-,+,+	MIR4310,MAPKBP1,MAPKBP1	92273,105,105
chr5:38849173-38850988	chr5	+	38849236	38850876	True	NM_003999,NM_001168355,NM_152756	chr5,chr5,chr5	+,+,-	OSMR,OSMR,RICTOR	-3188,-3329,223688
chr3:135111252-135112657	chr3	+	135111327	135112695	True	NM_178554,NM_001190447	chr3,chr3	-,+	KY,PPP2R3A	-741463,571819
chr3:155524641-155524974	chr3	+	155524938	155525004	True	NM_003875,NM_173657	chr3,chr3	+,-	GMPS,C3orf33	63320,-883
chr7:27197205-27197553	chr7	+	27197273	27197582	True	NM_152739,NR_002795,NM_024014,NM_006896	chr7,chr7,chr7,chr7	-,+,-,-	HOXA9,HOXA11-AS1,HOXA6,HOXA7	7617,27444,-9905,-977
chr22:25092500-25093040	chr22	+	25092732	25092944	True	NR_024593,NR_024494	chr22,chr22	-,+	POM121L10P,BCRP3	-37618,-63901
chr4:74486127-74487431	chr4	+	74486355	74487236	True	NM_177532,NM_000584,NM_201431	chr4,chr4,chr4	-,+,-	RASSF6,IL8,RASSF6	-221,118986,-15
chr9:130702407-130702728	chr9	+	130702461	130702757	True	NM_001135219,NM_003863,NM_001006641	chr9,chr9,chr9	-,-,+	PIP5KL1,DPM2,SLC25A25	-9385,-1698,127721
chr2:113671370-113671619	chr2	+	113671485	113671623	True	NM_173204,NM_173205,NM_173202,NM_173203,NM_000576,NM_014439	chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,+,-,+	IL1F7,IL1F7,IL1F7,IL1F7,IL1B,IL1F7	-988,1146,-988,-988,-77129,-988
chr3:129692029-129693353	chr3	+	129692729	129693277	True	NM_001128224,NM_007117	chr3,chr3	-,+	TMCC1,TRH	-80310,-48
chr14:74772631-74773990	chr14	+	74772709	74773840	True	NR_003256,NM_018228,NM_005050	chr14,chr14,chr14	-,+,-	ABCD4,VRTN,ABCD4	-2942,41325,-2942
chr21:43734242-43735012	chr21	+	43734288	43735038	True	NM_003226,NM_001001895	chr21,chr21	-,+	TFF3,UBASH3A	718,88980
chr8:32607996-32608713	chr8	+	32608000	32608735	True	NM_032664,NM_001159996	chr8,chr8	-,+	FUT10,NRG1	721979,-28700
chr3:33747662-33749271	chr3	+	33747940	33749288	True	NM_015097,NR_027868	chr3,chr3	-,+	CLASP2,PDCD6IP	10611,90777
chr19:45580508-45581450	chr19	+	45580540	45581353	True	NM_145288,NM_001007269,NM_001007270,NM_024707	chr19,chr19,chr19,chr19	-,+,+,+	ZNF296,GEMIN7,GEMIN7,GEMIN7	-852,1176,1164,1176
chr7:6957954-6958312	chr7	+	6957998	6958320	True	NM_198097,NM_173565	chr7,chr7	-,+	C7orf28B,RSPH10B	-92072,-164309
chr9:90559500-90559787	chr16	+	2048547	2048767	False	NM_178167,NM_004209	chr16,chr16	-,+	ZNF598,SYNGR3	11046,-8768
chr9:90559500-90559787	chr9	+	90559500	90559650	True	NM_001145124,NM_001039803	chr9,chr9	+,-	FAM75C1,CDK20	-26674,30095
chr2:60912433-60913022	chr2	+	60912446	60912766	True	NM_022893,NM_022894	chr2,chr2	-,+	BCL11A,PAPOLG	-131813,70598
chr8:55016012-55016581	chr8	+	55016306	55016418	True	NM_014175,NM_006330	chr8,chr8	+,-	MRPL15,LYPLA1	31362,-1729
chr19:44508806-44509197	chr19	+	44508902	44509002	True	NM_006300,NM_003425	chr19,chr19	+,-	ZNF230,ZNF45	-1886,-69491
chr13:31039981-31040182	chr13	+	31040049	31040185	True	NM_005800,NM_002128	chr13,chr13	+,-	USPL1,HMGB1	151644,16
chr2:239048446-239048647	chr2	+	239048450	239048636	True	NM_198582,NM_030768	chr2,chr2	+,-	KLHL30,ILKAP	-1138,63738
chr19:6457613-6458218	chr19	+	6457659	6458256	True	NM_139161,NM_174881,NM_024103	chr19,chr19,chr19	+,+,-	CRB3,CRB3,SLC25A23	6003,6003,1575
chr20:4621430-4622846	chr20	+	4621486	4622896	True	NR_024267,NM_000311	chr20,chr20	-,+	PRNT,PRNP	98475,43900
chr9:111877968-111879480	chr9	+	111878175	111879292	True	NM_032012,NM_017832	chr9,chr9	-,+	C9orf5,C9orf6	2988,-181560
chr15:75138213-75139133	chr15	+	75139098	75139158	True	NM_001030005,NM_001099436	chr15,chr15	+,-	CPLX3,ULK3	-20199,-3546
chr9:140773794-140774742	chr9	+	140773873	140774739	True	NM_032937,NM_000718	chr9,chr9	-,+	C9orf37,CACNA1B	-260565,-1683
chr7:138817798-138819175	chr7	+	138817954	138818990	True	NM_001144923,NM_024926,NM_001144920,NM_024625	chr7,chr7,chr7,chr7	+,+,+,-	TTC26,TTC26,TTC26,ZC3HAV1	93,93,93,-23489
chr1:42800018-42800286	chr1	+	42800033	42800297	True	NM_001198852,NM_001198850,NM_001198851,NM_014947,NM_173642	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	FOXJ3,FOXJ3,FOXJ3,FOXJ3,RIMKLA	639,1301,389,656,46170
chr17:76341798-76342854	chr17	+	76341850	76342866	True	NM_003955,NM_024419	chr17,chr17	-,+	SOCS3,PGS1	13342,31868
chr4:174097433-174098373	chr4	+	174097448	174098302	True	NM_017423,NM_001130689	chr4,chr4	+,-	GALNT7,HMGB2	-7595,156668
chr3:46307080-46307362	chr3	+	46307156	46307324	True	NM_001295,NM_178329	chr3,chr3	-,+	CCR1,CCR3	-57324,-23342
chr2:11599932-11601201	chr2	+	11600106	11601234	True	NM_014668,NR_003094,NR_003095,NR_003092,NR_003093,NM_198256	chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-	GREB1,E2F6,E2F6,E2F6,E2F6,E2F6	73007,5113,5113,5113,5113,5113
chr5:42435019-42435931	chr5	+	42435151	42435964	True	NM_001085486,NM_000163	chr5,chr5	-,+	SEPP1,GHR	376113,-11189
chr6:123318723-123318938	chr6	+	123318745	123318949	True	NM_001010852,NM_020755	chr6,chr6	+,-	CLVS2,SERINC1	-1215,-525793
chr15:23378780-23379103	chr15	+	23378822	23378888	True	NR_002824,NR_036470	chr15,chr15	-,+	HERC2P2,HERC2P7	-563,11833
chr15:23378780-23379103	chr15	+	20712030	20712096	False	NR_036432,NR_027411	chr15,chr15	-,+	HERC2P3,GOLGA8C	-597,55577
chr15:23378780-23379103	chr15	+	28567902	28567968	False	NM_004667,NR_033351	chr15,chr15	-,+	HERC2,GOLGA8F	-607,55815
chr15:23378780-23379103	chr15	-	28833946	28834012	False	NR_036443,NR_033351	chr15,chr15	+,-	HERC2P9,GOLGA8F	65575,-55803
chr16:14398594-14399208	chr16	+	14398849	14399239	True	NR_029854,NM_001134477,NR_030177	chr16,chr16,chr16	+,-,+	MIR365-1,PARN,MIR193B	3902,324931,-1086
chr22:42089600-42090294	chr22	+	42089694	42090340	True	NM_001003796,NM_001142964,NM_152513	chr22,chr22,chr22	-,+,+	NHP2L1,C22orf46,MEI1	-4781,-3198,5177
chr9:136401276-136401913	chr9	+	136401333	136401807	True	NM_014694,NM_001080483,NM_001145320	chr9,chr9,chr9	+,-,+	ADAMTSL2,TMEM8C,ADAMTSL2	-1409,-11265,-4098
chr3:197459632-197460059	chr3	+	197459641	197459950	True	NM_001011537,NM_014687	chr3,chr3	+,-	FYTTD1,KIAA0226	16473,3878
chr19:7697902-7698381	chr19	+	7697931	7698249	True	NM_006949,NR_033242,NM_020196,NM_174895,NM_001127396,NM_001171155	chr19,chr19,chr19,chr19,chr19,chr19	+,+,-,-,+,+	STXBP2,LOC100131801,XAB2,PCP2,STXBP2,LOC100131801	3741,-3311,-3492,371,3741,-3311
chr12:68044711-68046699	chr12	+	68044784	68046571	True	NM_003583,NM_000619,NM_006482	chr12,chr12,chr12	+,-,+	DYRK2,IFNG,DYRK2	-2323,507010,-2323
chr8:17727473-17728337	chr8	+	17727950	17728200	True	NM_006197,NM_147203	chr8,chr8	+,-	PCM1,FGL1	52165,24763
chr12:12511863-12512386	chr12	+	12511877	12512192	True	NM_058169,NM_018050,NR_024061	chr12,chr12,chr12	+,-,-	LOH12CR1,MANSC1,LOH12CR2	-1908,-8708,-1876
chr19:11650892-11651588	chr19	+	11650912	11651496	True	NM_016581,NM_001299	chr19,chr19	-,+	ECSIT,CNN1	-10925,-1384
chr15:40542522-40544409	chr15	+	40542564	40544286	True	NM_020168,NM_001039905	chr15,chr15	+,-	PAK6,C15orf56	-10580,874
chr16:69597518-69599231	chr16	+	69597751	69598849	True	NM_173214,NR_031719,NM_001113178,NM_006599,NM_138714,NM_138713	chr16,chr16,chr16,chr16,chr16,chr16	+,-,+,+,+,+	NFAT5,MIR1538,NFAT5,NFAT5,NFAT5,NFAT5	147,972,147,147,147,147
chr1:13521119-13521980	chr1	+	13521549	13521985	True	NM_001100114,NM_001099852,NM_001099850	chr1,chr1,chr1	+,+,-	PRAMEF21,PRAMEF20,PRAMEF18	-23,-5535,-43980
chr1:13521119-13521980	chr1	+	13742388	13742824	False	NM_001100114,NM_001099852,NM_001099850	chr1,chr1,chr1	+,+,-	PRAMEF21,PRAMEF20,PRAMEF18	-23,-5533,-43983
chr10:15760977-15761442	chr10	+	15760998	15761384	True	NM_183005,NM_003638	chr10,chr10	+,-	RPP38,ITGA8	-621868,436
chr7:45614590-45614846	chr7	+	45614641	45614883	True	NM_021116,NR_024271	chr7,chr7	+,-	ADCY1,SEPT7P2	-567,193784
chr11:59283161-59283881	chr11	+	59283228	59283653	True	NM_001004711,NR_036120	chr11,chr11	+,-	OR4D9,MIR3162	-900,79037
chr20:5482056-5484017	chr20	+	5482366	5483462	True	NR_029405,NR_015406	chr20,chr20	+,-	LOC643406,LOC149837	-30575,1830
chr1:95698328-95699051	chr1	+	95698366	95698952	True	NR_037643,NM_001199682,NM_015485,NM_001128142,NM_144988	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	RWDD3,RWDD3,RWDD3,RWDD3,ALG14	758,758,758,758,-159859
chr7:6385719-6386157	chr7	+	6385739	6386006	True	NM_006908,NM_001037163	chr7,chr7	+,-	RAC1,C7orf70	28119,2645
chr19:15834654-15835510	chr19	+	15834957	15835149	True	NM_013939,NR_033864	chr19,chr19	+,-	OR10H2,CYP4F24P	3684,55711
chr22:50607189-50607728	chr22	+	50607453	50607761	True	NR_027691,NM_052839,NM_001160300,NM_020461	chr22,chr22,chr22,chr22	+,+,+,-	PANX2,PANX2,PANX2,TUBGCP6	1398,1398,1398,75689
chr10:104179526-104179918	chr10	+	104179804	104179926	True	NM_024326,NM_002779	chr10,chr10	+,-	FBXL15,PSD	-284,-903
chr2:220409560-220410150	chr2	+	220409575	220410200	True	NR_036082,NM_024536,NM_001195731,NM_001005209	chr2,chr2,chr2,chr2	-,-,-,+	MIR3132,CHPF,CHPF,TMEM198	3720,-1088,-1756,-881
chr2:152687080-152688089	chr2	+	152687296	152687909	True	NM_012097,NM_001037174,NM_177985,NM_001177665	chr2,chr2,chr2,chr2	-,-,-,+	ARL5A,ARL5A,ARL5A,RIF1	-2287,-2287,-2287,-420743
chr1:160082138-160082394	chr1	+	160082211	160082411	True	NM_052868,NM_000702	chr1,chr1	-,+	IGSF8,ATP1A2	-13803,3108
chr12:41869182-41869672	chr12	+	41869249	41869650	True	NM_001099650,NM_013377	chr12,chr12	-,+	GXYLT1,PDZRN4	669082,-37775
chr16:67204521-67206156	chr16	+	67204821	67205821	True	NM_001538,NM_003946,NM_001040667,NM_001185058,NM_003789,NM_001185057	chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,-,+	HSF4,NOL3,HSF4,NOL3,TRADD,NOL3	-7584,1934,-7584,-467,-11009,1943
chr13:46420961-46421477	chr13	+	46421028	46421475	True	NM_198849,NM_152719	chr13,chr13	-,+	SIAH3,SPERT	4422,-144633
chr2:97654886-97656017	chr2	+	97654897	97655882	True	NM_001122646,NM_001164315	chr2,chr2	-,+	FAM178B,ANKRD36	-2596,123350
chr11:101771741-101772544	chr11	+	101771896	101772445	True	NM_020802,NM_178127	chr11,chr11	+,-	KIAA1377,ANGPTL5	13300,14865
chr4:142052458-142053144	chr4	+	142052531	142053097	True	NM_020724,NM_014487	chr4,chr4	-,+	RNF150,ZNF330	1569,88951
chr4:23723361-23724342	chr4	+	23723365	23724350	True	NM_020973,NM_013261	chr4,chr4	+,-	GBA3,PPARGC1A	-1028868,167401
chr10:133114645-133116079	chr10	+	133114996	133116073	True	NM_018461,NM_174937	chr10,chr10	+,-	PPP2R2D,TCERG1L	631886,-5012
chr20:38580603-38581609	chr20	+	38580851	38581561	True	NR_033905,NR_027124	chr20,chr20	+,-	DHX35,LOC339568	-989921,-727460
chr12:117535259-117536159	chr12	+	117535362	117536198	True	NM_001168325,NM_153348,NM_017899,NR_031766	chr12,chr12,chr12,chr12	-,+,-,-	TESC,FBXW8,TESC,TESC	1103,-186652,1103,1103
chr18:21242855-21244388	chr18	+	21243025	21244249	True	NM_001127717,NM_173505	chr18,chr18	+,-	LAMA3,ANKRD29	25312,-176
chr7:80548713-80548995	chr7	+	80548716	80548877	True	NM_006379,NM_001127444	chr7,chr7	-,+	SEMA3C,CD36	-49,-273005
chr11:102671677-102672316	chr11	+	102671686	102672308	True	NM_001080463,NM_002421,NM_001145938	chr11,chr11,chr11	+,-,-	DYNC2H1,MMP1,MMP1	307851,-2720,-2720
chr11:128737413-128739018	chr11	+	128737412	128738891	True	NM_153765,NM_153764,NM_153767,NM_153766,NM_000890	chr11,chr11,chr11,chr11,chr11	-,-,-,-,+	KCNJ1,KCNJ1,KCNJ1,KCNJ1,KCNJ5	-144,-144,-144,-144,22421
chr19:55627280-55627682	chr19	+	55627385	55627607	True	NM_017607,NM_017729	chr19,chr19	-,+	PPP1R12C,EPS8L1	1370,-35676
chr9:139641071-139641308	chr9	+	139641166	139641286	True	NR_033913,NM_198946,NM_001001712	chr9,chr9,chr9	+,-,-	LOC100128593,LCN6,LCN10	-604,1744,-3755
chr3:49056802-49057003	chr3	+	49056804	49056916	True	NM_001009996,NM_199074,NM_199073,NR_029948,NM_199070,NR_029690,NM_018114,NM_199069	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,+,+,-,+,-,-,+	DALRD3,NDUFAF3,NDUFAF3,MIR425,NDUFAF3,MIR191,DALRD3,NDUFAF3	-787,991,1701,813,2157,1288,1613,2157
chr21:34539701-34540062	chr21	+	34539754	34539824	True	NR_024102,NM_000874	chr21,chr21	-,+	C21orf54,IFNAR2	2771,62406
chr19:47165921-47167072	chr19	+	47166075	47167063	True	NM_005184,NM_145056	chr19,chr19	+,-	CALM3,DACT3	-61627,-1680
chr12:49319419-49320166	chr12	+	49319433	49319922	True	NM_001143782,NM_001143781,NM_033124,NM_016594	chr12,chr12,chr12,chr12	-,-,+,-	FKBP11,FKBP11,CCDC65,FKBP11	-103,-769,-21591,-103
chr2:70315800-70316767	chr2	+	70315814	70316654	True	NM_006196,NR_033872	chr2,chr2	+,-	PCBP1,LOC400960	-1280,-1667
chr3:183961937-183963509	chr3	+	183961986	183963550	True	NM_005787,NM_001006941,NR_030410,NM_032331,NM_014693,NR_024534,NR_024533	chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,+,+,+,-,-	ALG3,ALG3,MIR1224,ECE2,ECE2,ALG3,ALG3	3259,3813,-2844,3894,3894,3259,3259
chr19:55994532-55995171	chr19	+	55994666	55995194	True	NM_024710,NM_001144950,NM_020378,NM_033113,NM_001195267	chr19,chr19,chr19,chr19,chr19	-,+,+,+,+	ISOC2,SSC5D,NAT14,ZNF628,SSC5D	-21617,4675,1362,-7018,4675
chr14:38723903-38724305	chr14	+	38723975	38724249	True	NM_001049,NM_175060	chr14,chr14	+,-	SSTR1,CLEC14A	-46824,1375
chr5:180580165-180581247	chr5	+	180580183	180581249	True	NM_203297,NM_206880	chr5,chr5	-,+	TRIM7,OR2V2	46731,693
chr4:37588655-37590003	chr4	+	37588856	37590032	True	NM_018302,NM_001085399	chr4,chr4	+,-	C4orf19,RELL1	-3061,98017
chr10:96740979-96741209	chr10	+	96741186	96741256	True	NM_000771,NM_000770	chr10,chr10	+,-	CYP2C9,CYP2C8	-42829,88048
chr5:150716891-150718418	chr5	+	150716914	150718438	True	NM_001167607,NM_181776	chr5,chr5	+,-	GM2A,SLC36A2	-84352,8770
chr17:37844396-37845664	chr17	+	37844445	37845701	True	NM_001005862,NM_033419	chr17,chr17	+,-	ERBB2,PGAP3	-103,-135
chr8:144681006-144681219	chr8	+	144681066	144681126	True	NM_001130053,NM_032378,NM_001130055,NM_001130056,NM_001130057,NM_032862,NM_001960,NM_001195203	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,-,+,-,-	EEF1D,EEF1D,EEF1D,EEF1D,EEF1D,TIGD5,EEF1D,EEF1D	-1221,-1221,-1221,-1221,-1508,-1043,-1221,-1221
chrX:30326798-30326999	chrX	+	30326800	30327048	True	NM_177404,NM_000475	chrX,chrX	+,-	MAGEB1,NR0B1	-61580,497
chr1:203272365-203273322	chr1	+	203272594	203273242	True	NM_006763,NR_034151,NR_034150	chr1,chr1,chr1	+,-,-	BTG2,LOC730227,LOC730227	1421,1261,1261
chr17:42979017-42979924	chr17	+	42979235	42979801	True	NM_001142605,NM_213607,NM_004247	chr17,chr17,chr17	-,+,-	EFTUD2,CCDC103,EFTUD2	-2242,-2132,-2242
chr11:67771586-67771840	chr11	+	67771734	67771838	True	NM_030930,NM_001030010,NM_000694,NM_001161473	chr11,chr11,chr11,chr11	-,+,+,+	UNC93B1,ALDH3B1,ALDH3B1,ALDH3B1	-141,5951,5951,4209
chr2:171078567-171078853	chr2	+	171078588	171078890	True	NM_138995,NM_014168	chr2,chr2	+,-	MYO3B,METTL5	-43997,-397235
chr12:50451873-50452133	chr12	+	50451950	50452016	True	NM_020039,NM_001095,NM_013277	chr12,chr12,chr12	+,+,-	ACCN2,ACCN2,RACGAP1	-514,-514,-32643
chr11:113849386-113849821	chr11	+	113849386	113849814	True	NM_000869,NM_213621,NM_001161772,NM_020886	chr11,chr11,chr11,chr11	+,+,+,-	HTR3A,HTR3A,HTR3A,USP28	-3649,-3649,-1224,-103130
chr8:110645800-110646053	chr8	+	110645804	110645961	True	NM_004215,NM_001099756	chr8,chr8	+,-	EBAG9,SYBU	-93545,9515
chr16:2588660-2589171	chr16	+	2588798	2589084	True	NM_001048212,NR_036139,NM_031268,NM_002613	chr16,chr16,chr16,chr16	-,-,+,+	CEMP1,MIR3178,PDPK1,PDPK1	-7389,-6792,-881,-881
chr1:21722641-21723778	chr1	+	21722785	21723466	True	NM_032264,NM_001113348	chr1,chr1	+,-	NBPF3,ECE1	43164,-50751
chr7:65958721-65958965	chr7	+	65958776	65958992	True	NM_001167961,NR_002933	chr7,chr7	+,-	KCTD7,LOC493754	134875,84556
chr20:1372979-1373295	chr20	+	1372990	1373294	True	NR_037661,NM_000801,NM_014723,NM_054014,NM_001199786	chr20,chr20,chr20,chr20,chr20	-,-,+,-,-	FKBP1A-SDCBP2,FKBP1A,SNPH,FKBP1A,FKBP1A	572,572,-126081,572,572
chr19:47289056-47290636	chr19	+	47289363	47290567	True	NM_001145144,NM_001145145,NM_005628,NM_024301	chr19,chr19,chr19,chr19	-,-,-,+	SLC1A5,SLC1A5,SLC1A5,FKRP	28,-1229,1325,-40111
chr16:28550791-28551361	chr16	+	28551116	28551376	True	NM_138414,NM_001042483,NM_012385	chr16,chr16,chr16	+,-,-	CCDC101,NUPR1,NUPR1	13872,-621,-621
chrX:114796047-114796365	chrX	+	114796196	114796314	True	NM_005032,NM_020871	chrX,chrX	+,-	PLS3,LRCH2	-1070,-327561
chr8:31496899-31497146	chr8	+	31496914	31497132	True	NM_013962,NM_001015508	chr8,chr8	+,-	NRG1,PURG	135,-605683
chr11:89321200-89323115	chr11	+	89321929	89322882	True	NM_153696,NM_001143837	chr11,chr11	+,-	FOLH1B,NOX4	69582,-52
chr6:146056917-146057239	chr6	+	146057010	146057284	True	NM_005670,NM_000838,NM_001018041	chr6,chr6,chr6	-,+,-	EPM2A,GRM1,EPM2A	-19,291497,-19
chr8:12608906-12610718	chr8	+	12609339	12610576	True	NM_152271,NR_037495	chr8,chr8	-,+	LONRF1,MIR3926-2	2467,-24657
chr19:48948862-48949215	chr19	+	48949023	48949241	True	NM_013348,NM_006801,NM_031485	chr19,chr19,chr19	+,-,+	KCNJ14,KDELR1,GRWD1	9524,-54213,-44
chr15:60343613-60344111	chr15	+	60343804	60343968	True	NM_012182,NM_001002857	chr15,chr15	+,-	FOXB1,ANXA2	-47434,346270
chr3:44663513-44663978	chr3	+	44663528	44664014	True	NM_001024855,NM_020696,NM_006991	chr3,chr3,chr3	+,-,+	ZNF197,KIAA1143,ZNF197	2496,139209,2496
chr7:148960501-148961484	chr7	+	148960727	148961475	True	NM_001001661,NM_001195220	chr7,chr7	-,+	ZNF425,ZNF783	-137289,-1527
chr15:49316615-49317643	chr15	+	49316737	49317638	True	NM_001001556,NM_001193489	chr15,chr15	+,-	GALK2,SECISBP2L	130337,21179
chr17:47571883-47572355	chr17	+	47571949	47572121	True	NM_002634,NM_002507	chr17,chr17	-,+	PHB,NGFR	-79707,533
chr2:86790497-86792120	chr2	+	86790709	86791767	True	NM_016079,NM_001146688,NR_036454,NM_001193517,NM_001005753	chr2,chr2,chr2,chr2,chr2	-,+,-,-,-	VPS24,KDM3A,VPS24,VPS24,VPS24	-89,-122177,-89,-89,-89
chr18:56296208-56296542	chr18	+	56296282	56296587	True	NM_006785,NM_052947	chr18,chr18	+,-	MALT1,ALPK2	42030,-93
chr2:113999313-113999680	chr2	+	113999342	113999642	True	NR_015377,NM_003466	chr2,chr2	+,-	LOC654433,PAX8	-5547,36906
chr11:19372280-19372680	chr11	+	19372296	19372666	True	NM_001111018,NM_024680	chr11,chr11	+,-	NAV2,E2F8	-76,-109789
chr6:71608588-71610105	chr6	+	71608729	71610047	True	NM_080742,NM_021940	chr6,chr6	-,+	B3GAT2,SMAP1	56791,-231301
chr11:45869410-45871262	chr11	+	45869635	45871151	True	NM_021117,NM_001080446,NM_001127457	chr11,chr11,chr11	+,-,+	CRY2,C11orf94,CRY2	-729,57734,-1017
chr6:150260207-150261909	chr6	+	150260469	150261842	True	NM_025217,NM_001001788	chr6,chr6	+,-	ULBP2,RAET1G	1293,-16255
chr12:104696560-104697442	chr12	+	104696601	104697263	True	NM_006166,NM_001008394	chr12,chr12	-,+	NFYB,EID3	-164561,285
chrX:17662094-17662304	chrX	+	17662093	17662303	True	NM_001136024,NR_033348	chrX,chrX	+,-	NHS,RAI2	-8743,216694
chr14:89196063-89197585	chr14	+	89196290	89197367	True	NM_183387,NM_144596	chr14,chr14	-,+	EML5,TTC8	61787,93610
chr21:46102695-46102982	chr21	+	46102694	46103030	True	NM_181686,NM_198699	chr21,chr21	-,+	KRTAP12-1,KRTAP10-12	-616,14056
chr1:89455945-89457752	chr1	+	89456068	89457484	True	NM_019610,NM_001008662,NM_001008661,NM_001162536,NM_006256	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	RBMXL1,CCBL2,CCBL2,RBMXL1,PKN2	1209,1209,1209,1209,-306204
chr10:61663261-61664033	chr10	+	61663316	61664033	True	NM_005436,NM_001143774	chr10,chr10	-,+	CCDC6,PHYHIPL	2432,-726146
chr5:147110665-147111721	chr5	+	147110686	147111683	True	NM_014790,NM_054023	chr5,chr5	-,+	JAKMIP2,SCGB3A2	50626,146590
chr20:25063264-25063506	chr20	+	25063317	25063403	True	NM_014588,NM_001114089,NM_199425	chr20,chr20,chr20	-,+,-	VSX1,ENTPD6,VSX1	-550,112935,-550
chr20:29970221-29971568	chr20	+	29970238	29970898	True	NM_153289,NM_173460,NM_054112,NM_153323	chr20,chr20,chr20,chr20	-,-,+,-	DEFB119,DEFB119,DEFB118,DEFB119	7564,7564,-13872,7564
chr8:143996921-143997439	chr8	+	143996948	143997418	True	NM_000498,NM_002066	chr8,chr8	-,+	CYP11B2,GML	1891,-80782
chr17:38209942-38210164	chr17	+	38209950	38210080	True	NM_014815,NM_001079518,NM_199334,NM_001190919,NM_001190918,NM_003250	chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,+,+,+	MED24,MED24,THRA,THRA,THRA,THRA	859,859,8987,8365,8987,8987
chr4:184019905-184020163	chr4	+	184019933	184020011	True	NR_024008,NM_024949	chr4,chr4	-,+	C4orf38,WWC2	391,451
chr15:38816670-38817327	chr15	+	38816752	38817093	True	NM_173611,NM_001128602	chr15,chr15	+,-	FAM98B,RASGRP1	-70475,39964
chr4:2794716-2795045	chr4	+	2794797	2794897	True	NM_001122681,NM_024309	chr4,chr4	+,-	SH3BP2,TNIP2	-98,-36694
chr5:173162652-173163123	chr5	+	173162762	173163005	True	NM_030627,NM_138369	chr5,chr5	+,-	CPEB4,BOD1	152325,-119096
chr1:201859046-201859683	chr1	+	201859059	201859635	True	NM_198149,NM_012134,NR_030775	chr1,chr1,chr1	+,-,+	SHISA4,LMOD1,SHISA4	-1305,56131,-1313
chr15:43778428-43779117	chr15	+	43778680	43779166	True	NM_002373,NM_001141980,NM_001141979	chr15,chr15,chr15	+,-,-	MAP1A,TP53BP1,TP53BP1	30639,6242,6242
chr22:44419245-44419622	chr22	+	44419479	44419645	True	NM_013327,NM_138814	chr22,chr22	+,-	PARVB,PNPLA5	522,-131586
chr1:35227027-35227388	chr1	+	35227116	35227424	True	NM_001164824,NM_153212,NM_005268	chr1,chr1,chr1	-,+,+	C1orf212,GJB4,GJB5	97272,-1825,-6446
chr17:25597471-25599322	chr17	+	25597672	25598838	True	NM_015626,NM_000625	chr17,chr17	+,-	WSB1,NOS2	22267,528776
chr9:134165993-134166309	chr9	+	134166009	134166331	True	NM_032728,NM_033387	chr9,chr9	+,-	PPAPDC3,FAM78A	-979,-14103
chr18:55891310-55892950	chr18	+	55891329	55892858	True	NM_001144966,NM_052947	chr18,chr18	+,-	NEDD4L,ALPK2	-2613,403381
chr4:53579235-53580156	chr4	+	53579320	53580061	True	NR_024031,NM_022832,NR_003016	chr4,chr4,chr4	+,-,+	KIAA0114,USP46,SNORA26	-750,-53818,45
chr1:201252800-201253117	chr1	+	201252827	201253041	True	NM_000364,NM_000299,NM_001005337	chr1,chr1,chr1	-,+,+	TNNT2,PKP1,PKP1	93814,-298,-298
chr9:46325916-46326334	chr9	+	46326036	46326088	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2695306,361477
chr9:46325916-46326334	chr9	-	46178168	46178220	False	NM_001145196,NR_024060	chr9,chr9	-,+	FAM75A6,FAM27A	-2547438,-451190
chr12:108736257-108737095	chr12	+	108736340	108737140	True	NM_001142344,NM_004072,NM_007076,NM_001142343	chr12,chr12,chr12,chr12	-,-,+,-	CMKLR1,CMKLR1,FICD,CMKLR1	-3246,-3246,171910,-3246
chr6:111582003-111583088	chr6	+	111582038	111582573	True	NM_153369,NR_002932	chr6,chr6	+,-	KIAA1919,GSTM2P1	-1607,-213281
chr15:62941205-62942921	chr15	+	62941393	62942947	True	NM_015059,NR_026897	chr15,chr15	+,-	TLN2,MGC15885	-1939,-4013
chr17:41926490-41926855	chr17	+	41926539	41926853	True	NR_003562,NM_001168324,NM_001168323,NM_001168322,NM_145273	chr17,chr17,chr17,chr17,chr17	-,+,+,+,+	MPP3,CD300LG,CD300LG,CD300LG,CD300LG	-15992,-2074,-2074,-2074,-2074
chr17:40976391-40976640	chr17	+	40976397	40976471	True	NM_176863,NM_003766,NM_005789	chr17,chr17,chr17	+,-,+	PSME3,BECN1,PSME3	8951,-87,8951
chr21:44522014-44523378	chr21	+	44522126	44523144	True	NM_006758,NM_001025203,NM_001025204,NM_000394	chr21,chr21,chr21,chr21	-,-,-,+	U2AF1,U2AF1,U2AF1,CRYAA	4594,4594,4594,65996
chr8:144977340-144977819	chr8	+	144977530	144977851	True	NM_000837,NM_031308	chr8,chr8	+,-	GRINA,EPPK1	86374,-30096
chr3:48540637-48541006	chr3	+	48540636	48540986	True	NM_033629,NM_016479	chr3,chr3	+,-	TREX1,SHISA5	-33458,725
chr6:43197326-43198017	chr6	+	43197352	43197918	True	NM_006443,NM_199184,NM_032538	chr6,chr6,chr6	-,-,+	C6orf108,C6orf108,TTBK1	-141,-141,13303
chr10:101426010-101427850	chr10	+	101426259	101427546	True	NM_020354,NM_031212	chr10,chr10	+,-	ENTPD7,SLC25A28	-7047,-46038
chr12:123450262-123450682	chr12	+	123450385	123450731	True	NM_203444,NM_019625,NM_019624,NM_024623	chr12,chr12,chr12,chr12	-,-,-,+	ABCB9,ABCB9,ABCB9,OGFOD2	9071,375,375,8622
chr1:7844962-7845394	chr1	+	7845184	7845432	True	NM_006786,NM_016831	chr1,chr1	-,+	UTS2,PER3	67722,-472
chr12:57949546-57950012	chr12	+	57949762	57949930	True	NM_004984,NM_006400	chr12,chr12	+,-	KIF5A,DCTN2	-5973,-8784
chr5:169758338-169759038	chr5	+	169758346	169758972	True	NR_026945,NM_005565	chr5,chr5	+,-	LOC257358,LCP2	12,-33524
chr4:2418091-2418329	chr4	+	2418108	2418314	True	NM_001193282,NM_001172656,NM_001172657,NM_001172658,NM_020972	chr4,chr4,chr4,chr4,chr4	+,-,-,-,-	LOC402160,ZFYVE28,ZFYVE28,ZFYVE28,ZFYVE28	2386,2106,2106,2106,2106
chr1:22262157-22263345	chr1	+	22262218	22263236	True	NM_005529,NM_007352	chr1,chr1	-,+	HSPG2,CELA3B	564,40181
chr6:33361732-33363453	chr6_qbl_hap6	+	4594117	4595719	False	NM_001350	chr6_qbl_hap6	-	DAXX	-71075
chr6:33361732-33363453	chr6	+	33361888	33363490	True	NM_001014433,NM_002263	chr6,chr6	-,+	CUTA,KIFC1	22625,-2626
chr6:33361732-33363453	chr6_ssto_hap7	+	4842108	4843710	False	NM_001014433,NM_002263	chr6_ssto_hap7,chr6_ssto_hap7	-,+	CUTA,KIFC1	22651,-2630
chr14:23505069-23505587	chr14	+	23505085	23505199	True	NM_001144932,NM_001099780,NM_002797,NM_001130725	chr14,chr14,chr14,chr14	-,+,-,-	PSMB5,PSMB11,PSMB5,PSMB5	-731,6176,-731,-656
chr1:154941275-154941672	chr1	+	154941414	154941588	True	NM_003029,NM_001826,NR_036212,NR_024163,NM_138300,NM_001130041,NM_001130040,NM_183001,NM_001202859	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,+,-,-,-,-,-	SHC1,CKS1B,MIR4258,CKS1B,PYGO2,SHC1,SHC1,SHC1,SHC1	5421,5529,6580,5529,-7156,5421,1685,1685,5421
chr16:88804441-88804646	chr16	+	88804468	88804664	True	NM_178841,NM_001012762	chr16,chr16	-,+	RNF166,CTU2	-31639,-31628
chr14:23847973-23848304	chr14	+	23848049	23848289	True	NM_022789,NM_138460,NR_029595,NM_172314,NM_001037288	chr14,chr14,chr14,chr14,chr14	+,+,-,+,+	IL25,CMTM5,MIR208A,IL25,CMTM5	-6030,-2083,9636,-6082,-2083
chr4:41217140-41217715	chr4	+	41217188	41217750	True	NM_173075,NM_001166050,NM_004307,NM_004181	chr4,chr4,chr4,chr4	-,-,-,+	APBB2,APBB2,APBB2,UCHL1	-553,-553,-553,41147
chr4:88729479-88730233	chr4	+	88729702	88730232	True	NM_004684,NM_004967	chr4,chr4	-,+	SPARCL1,IBSP	-279047,-9059
chr19:58191791-58192699	chr19	+	58191969	58192501	True	NM_001085384,NM_138347	chr19,chr19	-,+	ZNF154,ZNF551	28135,855
chr15:78190735-78191238	chr15	+	78190766	78191120	True	NM_001101404,NR_027024	chr15,chr15	+,-	SH2D7,LOC645752	193806,28118
chr19:22017013-22017280	chr19	+	22017198	22017261	True	NR_024523,NM_003423	chr19,chr19	+,-	LOC641367,ZNF43	-83704,1762
chr5:43305591-43306938	chr5	+	43306215	43306987	True	NM_153361,NM_002130,NM_001098272	chr5,chr5,chr5	+,-,-	MGC42105,HMGCS1,HMGCS1	-113939,6658,6658
chr17:39646296-39648131	chr17	+	39646419	39647557	True	NM_005801,NM_003771,NM_002280	chr17,chr17,chr17	+,-,-	EIF1,KRT36,KRT35	197569,-303,-9027
chr8:19462993-19464386	chr8	+	19463084	19464174	True	NM_001130518,NM_018142	chr8,chr8	-,+	CSGALNACT1,INTS10	-3028,210743
chr19:4869282-4870085	chr19	+	4869481	4869771	True	NM_005817,NM_001048201,NM_001164189,NM_001164194	chr19,chr19,chr19,chr19	-,+,-,-	PLIN3,UHRF1,PLIN3,PLIN3	-1701,39738,-1701,-1701
chr11:4115979-4116182	chr11	+	4116065	4116223	True	NM_001665,NM_001033	chr11,chr11	-,+	RHOG,RRM1	-253852,-192
chr19:711433-712113	chr19	+	711470	711974	True	NM_214710,NM_002579,NM_001040134	chr19,chr19,chr19	-,+,+	PRSS57,PALM,PALM	-16009,-2568,-2568
chr21:44898551-44898766	chr21	+	44898659	44898723	True	NR_026960,NR_026863	chr21,chr21	+,-	C21orf125,C21orf84	-28806,-556
chr15:101458819-101459309	chr15	+	101458906	101459122	True	NM_001040616,NM_024652	chr15,chr15	-,+	LINS,LRRK1	-316461,337
chrX:15763146-15764259	chrX	+	15763463	15764150	True	NR_002725,NM_007220	chrX,chrX	-,+	INE2,CA5B	41621,-7106
chr21:30370089-30370813	chr21	+	30370088	30370855	True	NM_015565,NM_001001992	chr21,chr21	-,+	LTN1,USP16	-4811,26082
chr12:118405889-118406497	chr12	+	118405898	118406525	True	NM_173598,NM_001130112	chr12,chr12	-,+	KSR2,RFC5	70,47982
chr11:75274733-75275234	chr11	+	75274772	75275158	True	NM_030792,NM_001235	chr11,chr11	-,+	GDPD5,SERPINH1	-38173,-1653
chr12:102868765-102869489	chr12	+	102868804	102869405	True	NM_001111284,NM_001111285,NM_017915,NM_000618,NM_001111283	chr12,chr12,chr12,chr12,chr12	-,-,+,-,-	IGF1,IGF1,C12orf48,IGF1,IGF1	3075,5024,-354907,5024,5024
chr15:70949669-70951292	chr15	+	70949936	70951273	True	NM_001199017,NM_001008224	chr15,chr15	+,-	LRRC49,UACA	233654,43411
chr17:40985899-40987265	chr17	+	40986046	40987045	True	NM_176863,NM_009590,NM_001158,NM_003766,NM_005789	chr17,chr17,chr17,chr17,chr17	+,+,+,-,+	PSME3,AOC2,AOC2,BECN1,PSME3	-674,9563,9563,-9736,-674
chr17:20678809-20679863	chr17	+	20679090	20679900	True	NM_001190790,NM_001004306	chr17,chr17	+,-	CDRT15L2,CCDC144NL	-196104,119603
chr6:2986743-2987706	chr6	+	2986772	2987283	True	NR_026855,NR_026856,NM_004568	chr6,chr6,chr6	+,+,-	DKFZP686I15217,DKFZP686I15217,SERPINB6	917,917,-14373
chr16:84148357-84148824	chr16	+	84148445	84148873	True	NM_003791,NM_178452	chr16,chr16	-,+	MBTPS1,LRRC50	1694,29991
chrX:40692433-40692785	chrX	+	40692440	40692596	True	NR_027761,NM_001195522	chrX,chrX	-,+	LOC100132831,LOC347411	1,-209673
chr7:48217991-48219104	chr7	+	48218371	48218987	True	NM_152701,NM_152782	chr7,chr7	+,-	ABCA13,SUN3	-7375,-149655
chr11:102956396-102958058	chr11	+	102956545	102957378	True	NM_001080463,NM_032299	chr11,chr11	+,-	DYNC2H1,DCUN1D5	22781,5619
chr4:187476297-187476535	chr4	+	187476327	187476419	True	NM_000128,NM_005958	chr4,chr4	+,-	F11,MTNR1A	-289260,168
chr1:85720367-85721155	chr1	+	85720366	85720962	True	NR_024113,NM_145172,NM_198077	chr1,chr1,chr1	-,+,-	C1orf52,WDR63,C1orf52	4443,-192427,4443
chr7:142554571-142555079	chr7	+	142554651	142555077	True	NM_004445,NM_018646	chr7,chr7	+,-	EPHB6,TRPV6	-1910,28450
chr20:61867978-61868307	chr20	+	61868040	61868356	True	NM_022161,NM_139317,NR_036163,NM_152864	chr20,chr20,chr20,chr20	+,+,+,-	BIRC7,BIRC7,MIR3196,NKAIN4	-815,-815,1774,17586
chr4:113068536-113069074	chr4	+	113068535	113069112	True	NM_152400,NM_052864	chr4,chr4	+,-	C4orf32,TIFA	-2041,137997
chr8:70985056-70985731	chr8	+	70985092	70985588	True	NM_024504,NM_001128206	chr8,chr8	-,+	PRDM14,SULF1	-1530,-580115
chr14:20687652-20688720	chr14	+	20687662	20688420	True	NM_001004480,NM_138376	chr14,chr14	+,-	OR11H6,TTC5	3448,85793
chr17:36859628-36859858	chr17	+	36859690	36859906	True	NM_001130677,NM_005937	chr17,chr17	-,+	C17orf96,MLLT6	-28503,1966
chr10:116977005-116978714	chr10	+	116977192	116978690	True	NM_207303,NM_001003408	chr10,chr10	+,-	ATRNL1,ABLIM1	-124132,-532778
chr19:38863038-38863506	chr19	+	38863155	38863218	True	NM_152657,NM_002812	chr19,chr19	-,+	GGN,PSMD8	15503,1971
chr7:1272762-1272984	chr7	+	1272796	1272952	True	NM_001080461,NM_182491	chr7,chr7	+,-	UNCX,ZFAND2A	-193,-72941
chr3:194091670-194092992	chr3	+	194091804	194092675	True	NM_130830,NM_001135057,NR_033929	chr3,chr3,chr3	-,-,+	LRRC15,LRRC15,FLJ34208	-1332,-1332,115193
chr1:22467262-22467514	chr1	+	22467289	22467549	True	NM_030761,NM_001791	chr1,chr1	-,+	WNT4,CDC42	2020,-88220
chr4:7106197-7106661	chr4	+	7106229	7106557	True	NR_027441,NM_152293	chr4,chr4	-,+	FLJ36777,TADA2B	-1126,-61124
chr2:105051043-105052771	chr2	+	105051121	105052624	True	NR_015399,NR_037885	chr2,chr2	+,-	LOC150568,LOC100287010	-367,-26331
chr5:121188099-121188318	chr5	+	121188139	121188313	True	NM_001178102,NM_177478	chr5,chr5	-,+	LOX,FTMT	224655,-540
chr9:132564129-132564447	chr9	+	132564138	132564222	True	NM_000113,NM_014506	chr9,chr9	-,+	TOR1A,TOR1B	22269,1209
chr10:31609367-31609758	chr10	+	31609544	31609740	True	NM_001174093,NM_001174094,NM_001174095,NM_001174096,NM_030751,NR_024284,NM_001128128	chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,-,+	ZEB1,ZEB1,ZEB1,ZEB1,ZEB1,LOC220930,ZEB1	-1494,323,-1494,-1494,-1494,-1520,323
chr2:135478205-135479003	chr2	+	135478226	135478823	True	NM_138326,NM_030923	chr2,chr2	+,-	ACMSD,TMEM163	117362,-1655
chr12:91555328-91556009	chr12	+	91555357	91555708	True	NM_133504,NR_027932	chr12,chr12	-,+	DCN,CLLU1	16688,1259598
chr17:26644333-26644601	chr17	+	26644340	26644525	True	NM_014573,NR_028334	chr17,chr17	+,-	TMEM97,FLJ40504	1595,-9932
chr12:5278154-5278447	chr12	+	5278205	5278463	True	NM_006422,NM_002234	chr12,chr12	-,+	AKAP3,KCNA5	-523862,-125185
chr19:51737471-51738928	chr19	+	51737810	51738762	True	NM_001177608,NM_001772,NM_001082618,NM_001163922	chr19,chr19,chr19,chr19	+,+,+,-	CD33,CD33,CD33,VSIG10L	-9528,-9528,-9528,106666
chr12:122037535-122039068	chr12	+	122038557	122038951	True	NM_032590,NM_032790	chr12,chr12	-,+	KDM2B,ORAI1	-19637,25503
chr16:68059161-68060052	chr16	+	68059265	68059764	True	NM_017803,NM_018380	chr16,chr16	+,-	DUS2L,DDX28	-2113,-1495
chr3:58419682-58420528	chr3	+	58419864	58420320	True	NR_033384,NM_001173468,NM_000925,NM_001128214	chr3,chr3,chr3,chr3	-,-,-,+	PDHB,PDHB,PDHB,KCTD6	-298,-285,-285,57502
chr11:116661676-116662158	chr11	+	116661729	116662027	True	NM_003904,NM_000040,NM_001166598,NM_052968	chr11,chr11,chr11,chr11	-,+,-,-	ZNF259,APOC3,APOA5,APOA5	-2990,38596,1159,1159
chr17:62660117-62661605	chr17	+	62660471	62661654	True	NM_022739,NM_138363	chr17,chr17	-,+	SMURF2,CCDC45	-2085,-157370
chr1:169363051-169363639	chr1	+	169363148	169363640	True	NM_003666,NM_197972	chr1,chr1	+,-	BLZF1,NME7	-26018,-25962
chr14:59931191-59931438	chr14	+	59931281	59931377	True	NM_022571,NM_001098625	chr14,chr14	-,+	GPR135,JKAMP	732,19783
chr1:210500386-210500877	chr1	+	210500463	210500599	True	NM_001170588,NM_018194,NM_001170580,NM_001170564,NM_001170587,NR_024337,NM_001122834	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-,+	HHAT,HHAT,HHAT,HHAT,HHAT,C1orf133,HHAT	1650,1650,2040,996,1650,-92997,996
chr16:30721516-30723168	chr16	+	30721627	30723161	True	NR_002966,NM_001014979	chr16,chr16	+,-	SNORA30,C16orf93	64,50454
chr3:3846588-3847183	chr3	+	3846674	3847230	True	NM_016302,NM_020873	chr3,chr3	-,+	CRBN,LRRN1	-625273,-5604
chr3:36962169-36962585	chr3	+	36962171	36962359	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	24239,72481
chr1:37982025-37982452	chr1	+	37982122	37982229	True	NM_022756,NM_003462	chr1,chr1	-,+	MEAF6,DNALI1	-1758,40290
chr5:139558577-139559291	chr5	+	139559151	139559234	True	NM_002622,NM_032412	chr5,chr5	-,+	PFDN1,C5orf32	123514,-4552
chr1:204332363-204332603	chr1	+	204332439	204332561	True	NM_001204171,NR_027022,NM_014935	chr1,chr1,chr1	+,-,-	MDM4,LOC127841,PLEKHA6	152945,6336,-3395
chr4:9617440-9617810	chr4	+	9617444	9617521	True	NR_031688,NM_000798	chr4,chr4	-,+	MIR548I2,DRD5	-59507,165736
chr4:9617440-9617810	chr4	-	4023141	4023218	False	NM_000683,NR_024253	chr4,chr4	+,-	ADRA2C,LOC348926	-254897,-65993
chr21:46844358-46844631	chr21	+	46844481	46844643	True	NM_130445,NR_027498,NR_028082	chr21,chr21,chr21	+,-,-	COL18A1,NCRNA00175,NCRNA00175	-19435,392,362
chr7:128047506-128048703	chr7	+	128047634	128048730	True	NM_000883,NM_001142576,NM_001142574,NM_001142575,NM_001142573,NM_183243,NM_001098786,NM_001102605	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,-,+,-	IMPDH1,IMPDH1,IMPDH1,IMPDH1,IMPDH1,IMPDH1,C7orf68,IMPDH1	1356,1356,-1610,-1610,-1610,1356,47153,1356
chr17:75370660-75371328	chr17	+	75370670	75371354	True	NM_001113494,NM_001113493,NR_036200	chr17,chr17,chr17	+,+,-	SEPT9,SEPT9,MIR4316	810,-1449,21832
chr1:42921238-42921499	chr1	+	42921252	42921390	True	NM_032257,NM_001077447,NM_001146192,NM_024664	chr1,chr1,chr1,chr1	-,+,-,+	ZMYND12,PPCS,ZMYND12,PPCS	598,782,598,782
chr1:26326412-26327220	chr1	+	26326480	26327256	True	NM_000437,NM_004455	chr1,chr1	-,+	PAFAH2,EXTL1	-1832,21014
chr17:61714142-61714347	chr17	+	61714186	61714296	True	NM_203351,NM_030576	chr17,chr17	+,-	MAP3K3,LIMD2	-14436,63273
chr5:177581801-177582127	chr5	+	177581852	177582148	True	NM_022762,NM_017838,NM_001034833	chr5,chr5,chr5	+,-,-	RMND5B,NHP2,NHP2	-23875,-891,-891
chr16:68000654-68001758	chr16	+	68001119	68001771	True	NM_001145961,NM_001145962,NM_001145963,NM_001145964,NM_005072,NM_017803	chr16,chr16,chr16,chr16,chr16,chr16	-,-,-,-,-,+	SLC12A4,SLC12A4,SLC12A4,SLC12A4,SLC12A4,DUS2L	876,876,-3151,-338,876,55432
chr17:48252001-48252451	chr17	+	48252021	48252169	True	NR_024192,NR_024193,NM_001135697,NM_000023	chr17,chr17,chr17,chr17	-,-,+,+	HILS1,HILS1,SGCA,SGCA	-2184,-2184,-8707,-8707
chr14:21978754-21979041	chr14	+	21978788	21978919	True	NM_014828,NM_019852	chr14,chr14	+,-	TOX4,METTL3	-33504,589
chr4:88728079-88729479	chr4	+	88728247	88728957	True	NM_004684,NM_004967	chr4,chr4	-,+	SPARCL1,IBSP	-277592,-7608
chrX:124096011-124096388	chrX	+	124096014	124096342	True	NM_014253,NM_001163278,NM_001163279,NM_001195272	chrX,chrX,chrX,chrX	-,-,-,+	ODZ1,ODZ1,ODZ1,LOC100129520	1382,1382,1382,357626
chr15:25465596-25466123	chr15	+	25465679	25466145	True	NR_003315,NR_003358,NR_003495,NR_003496,NR_003497,NR_003346,NR_022010,NR_003344,NR_003345,NR_003351,NR_003347,NM_130838,NR_003342,NR_003343,NR_003303,NR_003348	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,+,+,+,+,-,+,+,+,+	SNORD115-23,SNORD115-43,SNORD115-24,HBII-52-27,HBII-52-28,SNORD115-31,PAR4,SNORD115-29,SNORD115-30,SNORD115-36,SNORD115-32,UBE3A,SNORD115-25,SNORD115-26,SNORD115-11,SNORD115-33	-8798,2247,-6935,-91,1355,6110,-8902,2247,4204,2247,7968,184558,-5053,-1977,2247,9839
chr21:19615621-19617097	chr21	+	19615698	19616958	True	NM_002772,NM_024944,NM_001204174	chr21,chr21,chr21	-,+,+	TMPRSS15,CHODL,CHODL	159062,191,1233
chr6:75994407-75995429	chr6	+	75994623	75995401	True	NM_001143958,NM_018247,NM_001100409	chr6,chr6,chr6	-,-,+	TMEM30A,TMEM30A,SENP6	9,9,316220
chr18:713023-713356	chr18	+	713049	713197	True	NM_001126123,NM_001071,NM_202758,NM_017512	chr18,chr18,chr18,chr18	-,+,-,-	ENOSF1,TYMS,ENOSF1,ENOSF1	-387,-55496,-532,-387
chr2:96782230-96782431	chr2	+	96782230	96782430	True	NR_003698,NM_000682	chr2,chr2	+,-	LOC729234,ADRA2B	-105982,-342
chr20:23419897-23421583	chr20	+	23420253	23421371	True	NM_080830,NM_138283	chr20,chr20	-,+	CST11,CSTL1	12163,17
chr4:142588412-142588808	chr4	+	142588416	142588810	True	NM_020724,NR_037840	chr4,chr4	-,+	RNF150,IL15	-533800,-30720
chr18:57486964-57487502	chr18	+	57487213	57487351	True	NM_133459,NM_021127	chr18,chr18	-,+	CCBE1,PMAIP1	-122569,79840
chr20:43371548-43372751	chr20	+	43371595	43372783	True	NM_182970,NM_022358	chr20,chr20	-,+	RIMS4,KCNK15	66179,1704
chr11:57414058-57414555	chr11	+	57414160	57414490	True	NR_029673,NM_145008	chr11,chr11	+,-	MIR130A,YPEL4	-5540,2977
chr11:96122617-96122859	chr11	+	96122679	96122777	True	NM_024725,NM_003772	chr11,chr11	-,+	CCDC82,JRKL	356,380
chr2:242578885-242580819	chr2	+	242578908	242580386	True	NM_015963,NM_013325,NM_178326	chr2,chr2,chr2	-,+,+	THAP4,ATG4B,ATG4B	-2183,-1932,-1932
chr22:35537093-35537505	chr22	+	35537265	35537551	True	NM_001008494,NM_005368	chr22,chr22	+,-	ISX,MB	-75186,475883
chr21:45230864-45231490	chr21	+	45230918	45231050	True	NR_026961,NM_003683	chr21,chr21	-,+	LOC284837,RRP1	1448,-21551
chr20:23331713-23331919	chr20	+	23331760	23331968	True	NM_013248,NM_022080	chr20,chr20	+,-	NXT1,NAPB	-438,70238
chr16:31496080-31496904	chr16	+	31496209	31496835	True	NM_022744,NM_003041	chr16,chr16	-,+	C16orf58,SLC5A2	22921,-1821
chr19:15752020-15752368	chr19	+	15752086	15752386	True	NM_000896,NM_001199208,NM_001199209,NR_033864	chr19,chr19,chr19,chr19	+,+,+,-	CYP4F3,CYP4F3,CYP4F3,CYP4F24P	-430,-430,-430,138462
chr12:48214769-48215105	chr12	+	48215018	48215138	True	NM_015401,NM_017842,NM_001098416	chr12,chr12,chr12	-,+,-	HDAC7,SLC48A1,HDAC7	-1255,-48102,-1255
chr3:185540405-185541125	chr3	+	185540406	185541165	True	NM_006548,NM_001007225,NR_027317	chr3,chr3,chr3	-,-,+	IGF2BP2,IGF2BP2,C3orf65	1712,1712,-109423
chr12:5405608-5406966	chr12	+	5405708	5406825	True	NM_020373,NM_001102654	chr12,chr12	-,+	ANO2,NTF3	648632,134454
chr1:48352516-48353251	chr1	+	48352592	48353196	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	109424,335160
chr2:30114235-30114854	chr2	+	30114234	30114888	True	NM_004304,NM_001127399	chr2,chr2	-,+	ALK,YPEL5	29639,254861
chr14:24675926-24676132	chr14	+	24676003	24676159	True	NM_174944,NM_001199821,NM_001199822,NM_014169,NM_001184739,NM_138476	chr14,chr14,chr14,chr14,chr14,chr14	+,-,-,-,+,-	TSSK4,MDP1,MDP1,CHMP4A,TSSK4,MDP1	-1136,9167,9167,6927,-1136,9167
chr16:2098181-2098403	chr16	+	2098187	2098443	True	NM_000548,NM_001077183,NM_001114382,NM_002528	chr16,chr16,chr16,chr16	+,+,+,-	TSC2,TSC2,TSC2,NTHL1	-248,-248,-248,-320
chr15:79099192-79101065	chr15	+	79099416	79101087	True	NR_036495,NM_014272	chr15,chr15	+,-	LOC646938,ADAMTS7	-55088,2736
chr21:44776309-44776583	chr21	+	44776333	44776621	True	NR_026960,NM_173354	chr21,chr21	+,-	C21orf125,SIK1	93282,70431
chr6:84562950-84563226	chr6	+	84563006	84563098	True	NR_026669,NM_001009994,NM_016230	chr6,chr6,chr6	-,+,+	SNAP91,RIPPLY2,CYB5R4	-143879,-72,6271
chr19:47249879-47250109	chr19	+	47250021	47250089	True	NM_013403,NM_001039877,NM_001039885,NM_024301	chr19,chr19,chr19,chr19	-,-,+,+	STRN4,STRN4,FKRP,FKRP	-301,-301,-769,-769
chr9:130476769-130477257	chr9	+	130476947	130477292	True	NM_001002913,NM_144965,NM_001012502	chr9,chr9,chr9	-,+,+	PTRH1,TTC16,C9orf117	694,1065,-7727
chr3:134513432-134513900	chr3	+	134513456	134513790	True	NM_178554,NM_004441	chr3,chr3	-,+	KY,EPHB1	-143592,308
chr1:168151018-168151583	chr1	+	168151341	168151588	True	NM_153832,NM_001031800,NM_152902	chr1,chr1,chr1	-,+,+	GPR161,TIPRL,TIPRL	-45717,-3230,-3230
chr7:82077597-82078255	chr7	+	82077931	82078073	True	NM_000722,NM_001127444	chr7,chr7	-,+	CACNA2D1,CD36	-4900,-1802236
chr22:30114858-30115346	chr22	+	30114866	30115320	True	NM_001003692,NM_182527	chr22,chr22	-,+	ZMAT5,CABP7	47699,1023
chr14:102024313-102024664	chr14	+	102024331	102024521	True	NR_002770,NR_031649,NM_001362	chr14,chr14,chr14	-,-,+	DIO3OS,MIR1247,DIO3	-2318,2288,3166
chr12:6053529-6053967	chr12	+	6053539	6053987	True	NM_020373,NM_001769	chr12,chr12	-,+	ANO2,CD9	1461,255494
chr16:89726017-89726341	chr16	+	89726185	89726389	True	NM_002768,NM_001083314,NM_153025	chr16,chr16,chr16	-,-,+	CHMP1A,CHMP1A,C16orf55	-2056,-2056,-2026
chr19:50872660-50873096	chr19	+	50872741	50872813	True	NM_007121,NM_004851	chr19,chr19	+,-	NR1H2,NAPSA	6871,-3810
chr22:24106671-24107318	chr22	+	24106768	24107344	True	NM_213720,NM_182520,NM_005940	chr22,chr22,chr22	-,+,+	CHCHD10,C22orf15,MMP11	2847,-1611,7691
chr16:81348082-81348549	chr16	+	81348136	81348408	True	NM_001076780,NM_022041	chr16,chr16	-,+	PKD1L2,GAN	-94161,162
chr16:333051-333397	chr16	+	333057	333377	True	NM_183337,NM_006849,NM_001176,NM_003834	chr16,chr16,chr16,chr16	-,+,+,-	RGS11,PDIA2,ARHGDIG,RGS11	-7143,4,-2502,-7143
chr1:100382216-100383381	chr1	+	100382254	100383351	True	NM_012243,NM_001013660	chr1,chr1	+,-	SLC35A3,FRRS1	52188,-150905
chrX:154440730-154441742	chrX	+	154440769	154441765	True	NM_003372,NM_171998	chrX,chrX	+,-	VBP1,RAB39B	2935,52137
chr11:45939807-45940037	chr11	+	45939882	45940072	True	NM_152312,NM_004813,NM_057174	chr11,chr11,chr11	+,-,-	GYLTL1B,PEX16,PEX16	3123,-208,-208
chr20:61906111-61906795	chr20	+	61906136	61906702	True	NM_018209,NM_152864,NM_175609	chr20,chr20,chr20	+,-,+	ARFGAP1,NKAIN4,ARFGAP1	-2023,-20244,-2023
chr11:124867410-124868926	chr11	+	124867472	124868974	True	NM_152722,NM_025004	chr11,chr11	-,+	HEPACAM,CCDC15	-61164,-43516
chr6:99799468-99799830	chr6	+	99799701	99799817	True	NM_032511,NM_001195131	chr6,chr6	-,+	C6orf168,LOC100130890	-2170,169052
chr8:27847295-27848096	chr8	+	27847459	27848058	True	NM_173833,NM_018091	chr8,chr8	-,+	SCARA5,ELP3	2362,102525
chr1:28155758-28157303	chr1	+	28156325	28157328	True	NM_014110,NR_002997,NM_002713,NM_138558,NM_002946	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	PPP1R8,SCARNA1,PPP1R8,PPP1R8,RPA2	71,3583,-4,-4,83958
chr2:33065382-33066155	chr2	+	33065381	33066026	True	NM_021209,NR_027098	chr2,chr2	-,+	NLRC4,LOC285045	-574569,-14922
chr2:20207212-20208774	chr2	+	20207353	20208698	True	NR_033875,NM_002381	chr2,chr2	+,-	FLJ12334,MATN3	-138789,3818
chr18:14502486-14503755	chr18	+	14502729	14503781	True	NR_024076,NR_026756	chr18,chr18	-,+	CXADRP3,LOC284233	-4024,-165358
chr19:924909-925221	chr19	+	925027	925181	True	NM_138774,NM_005224,NM_032551	chr19,chr19,chr19	-,+,+	C19orf22,ARID3A,KISS1R	-11802,855,-7736
chr5:156486961-156487469	chr5	+	156487040	156487519	True	NM_001099414,NM_012206,NM_001173393,NM_005546	chr5,chr5,chr5,chr5	-,-,-,+	HAVCR1,HAVCR1,HAVCR1,ITK	-1553,-1553,-1070,120387
chr10:88986303-88987043	chr10	+	88986338	88987046	True	NM_001099338,NR_024397	chr10,chr10	+,-	FAM22A,LOC728190	-1184,115319
chr10:88986303-88987043	chr10	+	52437640	52437959	False	NM_147156,NM_001079516	chr10,chr10	-,+	SGMS1,ASAH2B	-53903,61748
chr10:88986303-88987043	chr10	+	89118557	89119265	False	NM_001009610,NR_024397	chr10,chr10	+,-	FAM22D,LOC728190	-1131,-16242
chr10:88986303-88987043	chr10	+	81464116	81464824	False	NR_027512,NM_001098668	chr10,chr10	+,-	LOC650623,SFTPA2	-21436,-143953
chr10:88986303-88987043	chr10	+	81602247	81602955	False	NR_029407,NM_003019	chr10,chr10	+,-	LOC642361,SFTPD	-16640,105956
chr11:697001-697756	chr11	+	697343	697773	True	NM_021008,NM_001042463,NM_174940,NM_022772	chr11,chr11,chr11,chr11	-,+,+,+	DEAF1,TMEM80,TMEM80,EPS8L2	-1603,-1791,-1791,8346
chr6:3042050-3042776	chr6	+	3042071	3042458	True	NR_033884,NM_003804	chr6,chr6	-,+	LOC401233,RIPK1	-17066,34599
chrX:133508180-133508473	chrX	+	133508180	133508502	True	NM_032458,NM_001015877,NM_032335,NR_030587	chrX,chrX,chrX,chrX	+,+,+,-	PHF6,PHF6,PHF6,MIR450B	-894,-894,-894,165841
chr8:77464745-77465250	chr8	+	77464749	77465222	True	NM_024721,NR_024360	chr8,chr8	+,-	ZFHX4,LOC100192378	128292,130345
chr4:4859889-4860545	chr4	+	4859945	4860495	True	NM_002448,NM_018659	chr4,chr4	+,-	MSX1,CYTL1	896,160752
chr5:131090968-131092278	chr5	+	131091183	131092290	True	NM_001008738,NM_000588	chr5,chr5	-,+	FNIP1,IL3	40516,304056
chr11:64612563-64613300	chr11	+	64612572	64613050	True	NM_017525,NM_006244	chr11,chr11	-,+	CDC42BPG,PPP2R5B	-531,79092
chr5:133510700-133511970	chr5	+	133510699	133511940	True	NM_006930,NR_037434,NM_170679	chr5,chr5,chr5	-,+,-	SKP1,MIR3661,SKP1	838,49507,838
chr17:29154010-29154854	chr17	+	29154368	29154435	True	NM_015986,NM_024857	chr17,chr17	-,+	CRLF3,ATAD5	-2590,4587
chr20:39315738-39316062	chr20	+	39315783	39316083	True	NM_003286,NM_005461	chr20,chr20	+,-	TOP1,MAFB	341378,1843
chr6:42942286-42942629	chr6	+	42942536	42942672	True	NM_006245,NM_180976,NM_000287,NM_180977	chr6,chr6,chr6,chr6	+,+,-,+	PPP2R5D,PPP2R5D,PEX6,PPP2R5D	9657,9657,4359,9657
chr14:89884275-89884848	chr14	+	89884320	89884878	True	NR_036500,NM_005197	chr14,chr14	+,-	LOC400236,FOXN3	-673,-866
chrY:23757972-23758265	chrY	+	23758158	23758228	True	NM_001006120,NR_001537	chrY,chrY	+,-	RBMY1D,TTTY13	-61404,-1606
chr17:35847809-35848852	chr17	+	35848008	35848869	True	NM_198839,NM_007026	chr17,chr17	-,+	ACACA,DUSP14	-81106,1081
chr12:110435038-110436058	chr12	+	110435416	110436070	True	NM_057169,NM_014776,NM_033121,NM_057170,NM_001135213,NM_139201,NM_001135214	chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,-,+,-,-,-,-	GIT2,GIT2,ANKRD13A,GIT2,GIT2,GIT2,GIT2	-1222,-1222,1164,-1222,-1222,-1222,-1222
chr10:93390190-93390814	chr10	+	93390272	93390834	True	NM_025235,NM_005398	chr10,chr10	+,-	TNKS2,PPP1R3C	167316,2074
chr7:95059904-95061025	chr7	+	95060253	95061074	True	NM_145872,NM_001018161,NM_000305	chr7,chr7,chr7	+,-,-	ASB4,PON2,PON2	54138,3362,3362
chr22:40770115-40771303	chr22	+	40770330	40771315	True	NM_020831,NM_015705	chr22,chr22	-,+	MKL1,SGSM3	261434,-3795
chr12:6774489-6775223	chr12	+	6775055	6775218	True	NM_001127586,NM_001164094,NM_001127584,NM_001127585,NM_001127582,NM_001127583,NM_016162	chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,+,-,-,-,-,-	ING4,COPS7A,ING4,ING4,ING4,ING4,ING4	-2747,57931,-2747,-2747,-2747,-2747,-2747
chr19:21203172-21203442	chr19	+	21203263	21203427	True	NM_001172671,NM_025189,NM_021269	chr19,chr19,chr19	+,+,-	ZNF430,ZNF430,ZNF708	-2,-2,308835
chr12:53900833-53901439	chr12	+	53900940	53901404	True	NM_003717,NM_004178,NM_134323,NM_001193511,NM_134324,NM_006301	chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,-,+,-	NPFF,TARBP2,TARBP2,MAP3K12,TARBP2,MAP3K12	68,-6286,-6286,-7496,-5614,-7496
chr8:37411861-37412417	chr8	+	37412009	37412298	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	141002,193317
chr7:22549131-22550552	chr7	+	22549383	22549616	True	NM_001164460,NM_207342,NM_000600	chr7,chr7,chr7	-,-,+	MGC87042,MGC87042,IL6	-9482,-9482,217149
chr22:31680826-31681474	chr22	+	31680949	31681513	True	NM_001135911,NM_052880,NM_016733	chr22,chr22,chr22	-,-,+	PIK3IP1,PIK3IP1,LIMK2	7063,7063,-36652
chr17:47754428-47754885	chr17	+	47754483	47754913	True	NM_001007226,NM_001007227,NM_001007230,NM_003563,NM_001007228,NM_001007229,NM_007225	chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,-,+	SPOP,SPOP,SPOP,SPOP,SPOP,SPOP,NXPH3	662,662,662,662,662,662,-101243
chr18:48490009-48491815	chr18	+	48490139	48491679	True	NM_018696,NM_001127174	chr18,chr18	+,-	ELAC1,MRO	2707,-138385
chr12:132412486-132412891	chr12	+	132412682	132412748	True	NM_175066,NM_001002020,NM_025215,NM_001002019	chr12,chr12,chr12,chr12	-,+,+,+	DDX51,PUS1,PUS1,PUS1	216182,996,1064,1049
chr3:14445461-14446196	chr3	+	14445526	14446160	True	NM_001134367,NM_001080423,NM_001134368,NM_003043	chr3,chr3,chr3,chr3	+,-,+,+	SLC6A6,GRIP2,SLC6A6,SLC6A6	-1471,137478,-1471,-1471
chr1:17305828-17306028	chr1	+	17305982	17306058	True	NM_014675,NM_001135248,NM_002403,NM_017459,NM_001135247	chr1,chr1,chr1,chr1,chr1	+,-,-,-,-	CROCC,MFAP2,MFAP2,MFAP2,MFAP2	-57588,1165,1165,2073,2073
chr2:207826885-207828868	chr2	+	207826992	207828865	True	NM_173077,NR_036227	chr2,chr2	+,-	CPO,MIR2355	-22765,145982
chrX:133369158-133369485	chrX	+	133369247	133369507	True	NM_001101357,NR_029523	chrX,chrX	+,-	CCDC160,MIR106A	1569,-64939
chr1:156675323-156675751	chr1	+	156675368	156675769	True	NM_001199723,NM_001878,NM_001142560	chr1,chr1,chr1	-,-,+	CRABP2,CRABP2,RRNAD1	31,-30,22493
chr12:123463715-123464218	chr12	+	123463725	123464235	True	NM_203444,NM_024623,NM_018694,NM_001002251,NM_001002252,NM_016638	chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,+,+,+	ABCB9,OGFOD2,ARL6IP4,ARL6IP4,ARL6IP4,ARL6IP4	-3973,-4422,644,644,644,644
chr1:145942896-145943850	chr1	+	145943107	145943747	True	NR_003377,NM_001097616	chr1,chr1	-,+	PDZK1P1,GPR89C	-488,-59291
chr1:145942896-145943850	chr1	+	147484818	147485458	False	NR_003377,NM_001097616	chr1,chr1	-,+	PDZK1P1,GPR89C	-487,-59303
chr3:48751110-48752203	chr3	+	48752109	48752177	True	NM_001005910,NM_001005911,NR_027437,NR_027438,NM_001146178,NM_001146179,NM_006321,NM_001190317,NM_001190316,NM_001005909,NM_016291	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,-,-,+,-,-,-,-	IP6K2,IP6K2,IP6K2,IP6K2,IP6K2,IP6K2,ARIH2,IP6K2,IP6K2,IP6K2,IP6K2	2584,2584,2584,2584,2584,2584,204103,2584,2584,2584,2584
chr17:16874585-16875089	chr17	+	16874772	16874999	True	NM_015134,NM_012452	chr17,chr17	+,-	MPRIP,TNFRSF13B	71107,458
chrX:48979371-48979884	chrX	+	48979423	48979839	True	NM_001099681,NM_015698	chrX,chrX	+,-	MAGIX,GPKOW	39341,290
chr22:37449585-37449846	chr22	+	37449645	37449865	True	NM_024681,NM_003312	chr22,chr22	+,-	KCTD17,TST	-1917,-34154
chr18:14489075-14489276	chr18	+	14489159	14489275	True	NR_024076,NR_026756	chr18,chr18	-,+	CXADRP3,LOC284233	9480,-151788
chr18:14489075-14489276	chr15	+	21022015	21022065	False	NM_207355,NR_027411	chr15,chr15	-,+	POTEB,GOLGA8C	49962,-254392
chr18:14489075-14489276	chr15	+	22028689	22028739	False	NR_015416,NR_024387	chr15,chr15	+,-	LOC727924,CXADRP2	249292,-11811
chr18:32397281-32398135	chr18	+	32397317	32398174	True	NM_001198944,NM_001198942,NM_001198943,NM_001112734,NM_032981,NM_032980	chr18,chr18,chr18,chr18,chr18,chr18	+,+,+,-,+,+	DTNA,DTNA,DTNA,ZSCAN30,DTNA,DTNA	72,72,-117,472072,127,127
chr6:39697500-39698785	chr6	+	39697500	39698544	True	NM_145027,NM_001201427	chr6,chr6	-,+	KIF6,DAAM2	-4319,61614
chr8:56015303-56015652	chr8	+	56015409	56015573	True	NM_052898,NR_027765	chr8,chr8	+,-	XKR4,SBF1P1	-443,352358
chr22:25370750-25372123	chr22	+	25371210	25371980	True	NM_001145206,NM_001001663	chr22,chr22	+,-	KIAA1671,TMEM211	51960,-35896
chrX:149625964-149626746	chrX	+	149626222	149626764	True	NM_005491,NM_001184808	chrX,chrX	+,-	MAMLD1,CD99L2	-12554,440577
chr10:81838758-81838983	chr10	+	81838815	81838909	True	NR_027430,NR_027431,NR_027432,NR_027429,NR_027428,NM_025125	chr10,chr10,chr10,chr10,chr10,chr10	-,-,-,-,-,+	LOC219347,LOC219347,LOC219347,LOC219347,LOC219347,C10orf57	90,90,90,90,90,-440
chr19:4790376-4790754	chr19	+	4790509	4790762	True	NM_182919,NM_018708	chr19,chr19	-,+	TICAM1,FEM1A	41025,965
chr1:40254163-40254389	chr1	+	40254300	40254394	True	NM_001720,NM_001195007	chr1,chr1	-,+	BMP8B,PPIE	189,-49834
chrX:101098737-101100635	chrX	+	101098740	101100662	True	NM_032946,NM_177948	chrX,chrX	-,+	NXF5,ARMCX3	11937,-220440
chr2:241809241-241809749	chr2	+	241809278	241809500	True	NM_024861,NM_000030	chr2,chr2	-,+	C2orf54,AGXT	22002,-1167
chr12:100882071-100883383	chr12	+	100882110	100883181	True	NM_152317,NM_005123	chr12,chr12	-,+	DEPDC4,NR1H4	-221253,-14485
chr11:13032455-13032716	chr11	+	13032547	13032739	True	NM_001080521,NM_032320	chr11,chr11	+,-	RASSF10,BTBD10	-1628,452149
chr2:68965875-68966825	chr2	+	68965972	68966852	True	NM_001007231,NM_001166277,NM_014482	chr2,chr2,chr2	+,+,-	ARHGAP25,ARHGAP25,BMP10	-4110,-4110,131847
chr1:173568348-173568559	chr1	+	173568367	173568495	True	NM_001195190,NM_178527	chr1,chr1	+,-	LOC730159,SLC9A11	36165,3788
chr19:6362955-6363628	chr19	+	6363444	6363638	True	NM_006012,NM_004158,NM_032306	chr19,chr19,chr19	+,-,+	CLPP,PSPN,ALKBH7	-2032,12272,8805
chr5:176809394-176810422	chr5	+	176809403	176810248	True	NM_001029886,NM_001167579,NM_003052	chr5,chr5,chr5	-,+,+	PFN3,SLC34A1,SLC34A1	17446,1183,1183
chr6:47008130-47008347	chr6	+	47008266	47008350	True	NM_025048,NM_153840,NM_005588	chr6,chr6,chr6	-,-,+	GPR110,GPR110,MEP1A	1782,1782,-247228
chr6:40553864-40554262	chr6	+	40553870	40554228	True	NR_024015,NM_020737	chr6,chr6	+,-	TDRG1,LRFN2	-207758,948
chr17:66452812-66453364	chr17	+	66452855	66453382	True	NM_017983,NM_212471	chr17,chr17	-,+	WIPI1,PRKAR1A	321,54727
chr20:44484111-44485241	chr20	+	44484417	44485003	True	NM_005469,NR_037628,NM_080752	chr20,chr20,chr20	-,+,+	ACOT8,ZSWIM3,ZSWIM3	1095,1216,1216
chr18:11688227-11689083	chr18	+	11688366	11689124	True	NM_023075,NM_182978	chr18,chr18	-,+	MPPE1,GNAL	219567,11
chr2:201190192-201191616	chr2	+	201190427	201191382	True	NM_001100423,NM_152387	chr2,chr2	+,-	SPATS2L,KCTD18	-19129,183461
chr4:39639731-39640193	chr4	+	39639731	39640077	True	NM_174921,NM_001111112	chr4,chr4	-,+	C4orf34,UBE2K	460,59586
chr6:125525784-125526428	chr6	+	125525912	125526468	True	NM_016063,NM_001003395	chr6,chr6	-,+	HDDC2,TPD52L1	96864,-50555
chrX:53311099-53311300	chrX	+	53311131	53311356	True	NR_024449,NM_015075,NM_144968	chrX,chrX,chrX	-,-,+	IQSEC2,IQSEC2,RIBC1	-335,-335,138482
chr11:8013761-8014344	chr11	+	8013798	8014386	True	NM_003754,NM_176821	chr11,chr11	+,-	EIF3F,NLRP10	-4982,-28739
chr7:48074166-48074915	chr7	+	48074187	48074756	True	NM_001030019,NM_001100159,NM_152782	chr7,chr7,chr7	-,+,-	SUN3,C7orf57,SUN3	-5471,360,-5471
chr9:99217091-99218106	chr9	+	99217399	99217464	True	NM_153695,NM_014282	chr9,chr9	-,+	ZNF367,HABP4	-36730,-5050
chr11:118956023-118957087	chr11	+	118956067	118956969	True	NM_000190,NM_001024382,NM_002105	chr11,chr11,chr11	+,+,-	HMBS,HMBS,H2AFX	-531,1727,9258
chr15:49337466-49338374	chr15	+	49337557	49338120	True	NM_014701,NM_001001556,NM_001193489	chr15,chr15,chr15	-,+,-	SECISBP2L,GALK2,SECISBP2L	690,109855,690
chr11:67276428-67277378	chr11	+	67276431	67277356	True	NM_003977,NM_005851,NM_004910,NM_001130848	chr11,chr11,chr11,chr11	+,-,-,-	AIP,CDK2AP2,PITPNM1,PITPNM1	-25977,-329,-3588,-3588
chr19:1481349-1481943	chr19	+	1481403	1481861	True	NM_138393,NM_152482,NM_017573	chr19,chr19,chr19	+,-,-	REEP6,C19orf25,PCSK4	9303,-2175,8596
chr6:33267263-33267637	chr6_qbl_hap6	+	4499530	4499868	False	NM_001164267,NR_028387,NM_004761,NM_005452,NM_001185181,NM_014260	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	-,-,-,-,+,+	WDR46,RGL2,RGL2,WDR46,PFDN6,PFDN6	-9983,-114,-114,-9983,-9926,-9960
chr6:33267263-33267637	chr6_mcf_hap5	+	4741034	4741372	False	NM_001164267,NR_028387,NM_004761,NM_005452,NM_001185181,NM_014260	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	-,-,-,-,+,+	WDR46,RGL2,RGL2,WDR46,PFDN6,PFDN6	-9986,-114,-114,-9986,-10033,-9963
chr6:33267263-33267637	chr6_cox_hap2	+	4711104	4711442	False	NM_001164267,NR_028387,NM_004761,NM_005452,NM_001185181,NM_014260	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	-,-,-,-,+,+	WDR46,RGL2,RGL2,WDR46,PFDN6,PFDN6	-9986,-114,-114,-9986,-10033,-9963
chr6:33267263-33267637	chr6	+	33267290	33267628	True	NM_001164267,NR_028387,NM_004761,NM_005452,NM_001185181,NM_014260	chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,-,+,+	WDR46,RGL2,RGL2,WDR46,PFDN6,PFDN6	-9986,-114,-114,-9986,-9929,-9963
chr6:33267263-33267637	chr6_dbb_hap3	+	4548616	4548954	False	NM_001164267,NR_028387,NM_004761,NM_005452,NM_001185181,NM_014260	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	-,-,-,-,+,+	WDR46,RGL2,RGL2,WDR46,PFDN6,PFDN6	-9986,-114,-114,-9986,-10033,-9963
chr1:197885353-197885597	chr1	+	197885367	197885645	True	NM_001014434,NM_001195216,NM_020204	chr1,chr1,chr1	+,-,+	LHX9,DENND1B,LHX9	-3783,-140744,871
chr1:9293642-9294304	chr1	+	9293663	9294293	True	NM_004285,NR_029610	chr1,chr1	+,-	H6PD,MIR34A	569,-81827
chr21:36095350-36096165	chr21	+	36095505	36095679	True	NM_004414,NR_024351	chr21,chr21	-,+	RCAN1,NCRNA00160	-108123,425
chr1:9127244-9127968	chr1	+	9127245	9127955	True	NM_001215,NM_003039,NM_001135585	chr1,chr1,chr1	+,-,-	CA6,SLC2A5,SLC2A5	-121374,1988,1988
chr18:75690034-75690239	chr18	+	75690128	75690238	True	NM_001480,NM_001025100	chr18,chr18	+,-	GALR1,MBP	-728171,-845354
chr3:13115267-13115540	chr3	+	13115305	13115577	True	NM_012298,NM_001134382	chr3,chr3	+,-	CAND2,IQSEC1	-277185,-688
chr9:138368689-138369380	chr9	+	138368793	138369094	True	NM_014811,NM_001048265	chr9,chr9	+,-	KIAA0649,C9orf116	2553,22723
chr10:102131213-102131659	chr10	+	102131348	102131472	True	NM_016112,NR_026762	chr10,chr10	-,+	PKD2L1,NCRNA00263	-41105,1860
chr16:69165694-69165964	chr16	+	69165751	69165950	True	NM_001039690,NR_033227,NM_001040146,NM_032830	chr16,chr16,chr16,chr16	-,-,-,+	CHTF8,CHTF8,CHTF8,CIRH1A	593,593,162,548
chr11:58912509-58913144	chr11	+	58912859	58913187	True	NM_198847,NM_001142519,NM_001142520,NM_022074,NM_001142521,NM_001039396	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,-	FAM111A,FAM111A,FAM111A,FAM111A,FAM111A,MPEG1	-664,-2598,-2598,-664,-2598,67357
chr1:213031020-213031399	chr1	+	213031031	213031253	True	NM_014053,NR_027286,NR_027285	chr1,chr1,chr1	+,-,-	FLVCR1,NCRNA00292,NCRNA00292	343,277,277
chr5:150537601-150538146	chr5	+	150537603	150538006	True	NM_000405,NM_001155	chr5,chr5	+,-	GM2A,ANXA6	94606,-160
chr8:38323823-38324040	chr8	+	38323846	38324078	True	NM_001174065,NM_001174064,NM_001174067,NM_001174066,NM_001174063,NM_023110,NM_023105,NM_015850,NM_023106,NM_001199660	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,-,-,-,-,-,+	FGFR1,FGFR1,FGFR1,FGFR1,FGFR1,FGFR1,FGFR1,FGFR1,FGFR1,LETM2	1335,2324,1335,1335,2324,2324,2324,2324,2324,-79248
chr17:5137726-5138960	chr17	+	5137823	5138879	True	NM_207103,NR_034082	chr17,chr17	-,+	C17orf87,LOC100130950	68,-42495
chr6:35764633-35764999	chr6	+	35764729	35764945	True	NM_182548,NM_001832	chr6,chr6	+,-	LHFPL5,CLPS	8125,207
chr3:36934175-36934935	chr3	+	36934390	36934983	True	NM_014831,NM_000249	chr3,chr3	-,+	TRANK1,MLH1	51615,99857
chr11:36431811-36433118	chr11	+	36431983	36432919	True	NM_001160169,NM_004620	chr11,chr11	+,-	PRR5L,TRAF6	-9487,98953
chr7:65546869-65547329	chr7	+	65546940	65547127	True	NM_000181,NM_001024943,NM_001024944,NM_001024946,NM_000048	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	GUSB,ASL,ASL,ASL,ASL	-99639,-6157,-6157,-6157,-6215
chr7:137531947-137532187	chr7	+	137532097	137532173	True	NM_004717,NM_001190906	chr7,chr7	-,+	DGKI,AKR1D1	-488,229004
chr11:120969791-120970405	chr11	+	120969919	120970448	True	NM_012101,NM_005422	chr11,chr11	-,+	TRIM29,TECTA	-961056,2926
chr6:46882886-46884198	chr6	+	46882939	46884232	True	NM_001098518,NM_005588	chr6,chr6	-,+	GPR116,MEP1A	5532,-121904
chr9:131131487-131132303	chr9	+	131131748	131131903	True	NR_029837,NM_030914,NM_001135947	chr9,chr9,chr9	-,+,+	MIR219-2,URM1,URM1	23145,1694,1694
chr16:88876021-88877025	chr16	+	88876036	88876988	True	NM_000485,NM_001030018,NM_030928	chr16,chr16,chr16	-,-,+	APRT,APRT,CDT1	1404,1404,-5901
chr6:164724502-164726126	chr6	+	164724574	164726033	True	NM_206855,NR_037593	chr6,chr6	+,-	QKI,LOC100526820	-888950,-889592
chr19:58367088-58367866	chr19	+	58367248	58367771	True	NM_032828,NR_024162,NM_001204817	chr19,chr19,chr19	+,-,+	ZNF587,FKBP1AP1,ZNF587	-6118,-28418,-6118
chr7:116963567-116963959	chr7	+	116963570	116963940	True	NR_002332,NR_024047,NM_003391	chr7,chr7,chr7	+,-,-	ST7OT3,WNT2,WNT2	-140886,-227,-227
chr1:9188440-9188645	chr1	+	9188506	9188572	True	NM_004285,NM_024980	chr1,chr1	+,-	H6PD,GPR157	106290,707
chr2:20357304-20358572	chr2	+	20357448	20358582	True	NR_033875,NM_004040,NM_002997	chr2,chr2,chr2	+,+,-	FLJ12334,RHOB,SDC1	-288884,288252,66397
chr2:191513646-191513977	chr2	+	191513645	191513910	True	NM_005966,NM_001142645	chr2,chr2	+,-	NAB1,TMEM194B	-51,-114177
chr11:59602931-59603638	chr11	+	59603020	59603672	True	NM_004177,NM_005142	chr11,chr11	+,-	STX3,GIF	-80547,9352
chr1:11795145-11795407	chr1	+	11795349	11795455	True	NM_001040195,NM_001040194,NM_001040197,NM_001040196,NM_020350,NM_001127325	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-	AGTRAP,AGTRAP,AGTRAP,AGTRAP,AGTRAP,MAD2L2	686,686,686,686,686,-43671
chrX:15352221-15352605	chrX	+	15352220	15352308	True	NR_033835,NR_033836,NM_020473,NM_002641,NM_203281	chrX,chrX,chrX,chrX,chrX	-,-,-,-,+	PIGA,PIGA,PIGA,PIGA,BMX	1428,1428,1428,1428,166591
chr17:58470180-58470947	chr17	+	58470273	58470965	True	NM_181707,NM_032582	chr17,chr17	+,-	C17orf64,USP32	28899,-687
chr18:11702336-11702837	chr18	+	11702440	11702716	True	NM_023075,NM_182978	chr18,chr18	-,+	MPPE1,GNAL	205975,-13355
chr17:42248853-42249504	chr17	+	42249062	42249510	True	NM_178542,NM_080863	chr17,chr17	-,+	C17orf65,ASB16	14622,-1047
chr14:68100442-68102290	chr14	+	68100466	68102163	True	NM_001172,NM_004569	chr14,chr14	+,-	ARG2,PIGH	-13938,-33449
chr2:179316942-179317666	chr2	+	179317048	179317696	True	NM_001042702,NM_001139518,NM_001139517,NM_003690	chr2,chr2,chr2,chr2	+,-,-,-	DFNB59,PRKRA,PRKRA,PRKRA	-947,-1693,-1564,-1090
chr19:42776777-42777235	chr19	+	42776791	42777137	True	NM_006494,NM_015125	chr19,chr19	-,+	ERF,CIC	-17482,11679
chr4:165876175-165877339	chr4	+	165876293	165877208	True	NM_153027,NM_001012414	chr4,chr4	+,-	C4orf39,TRIM61	891,21670
chr14:23789511-23790114	chr14	+	23789555	23790091	True	NR_026862,NM_004643	chr14,chr14	-,+	PPP1R3E,PABPN1	-17498,-209
chr3:121729366-121730637	chr3	+	121729484	121730654	True	NM_175924,NM_175862	chr3,chr3	-,+	ILDR1,CD86	10523,43566
chr15:49850284-49851853	chr15	+	49850548	49851759	True	NM_152647,NM_001144955	chr15,chr15	-,+	C15orf33,DTWD1	61409,61466
chr7:44796075-44796732	chr7	+	44796186	44796708	True	NM_174929,NM_031449,NM_138635	chr7,chr7,chr7	+,+,-	ZMIZ2,ZMIZ2,H2AFV	-450,-7707,91067
chr3:88026639-88028557	chr3	+	88027032	88028606	True	NM_001008390,NM_000866	chr3,chr3	-,+	CGGBP1,HTR1F	79590,3119
chr15:60691041-60692981	chr15	+	60691151	60692583	True	NM_012182,NM_001002858,NM_004039,NM_001002857,NM_001136015	chr15,chr15,chr15,chr15,chr15	+,-,-,-,-	FOXB1,ANXA2,ANXA2,ANXA2,ANXA2	-394781,-966,-966,-966,-966
chr16:86592705-86593018	chr16	+	86592711	86593027	True	NM_001159380,NM_001159378,NM_001159379,NR_027490,NM_005251,NM_022764,NM_001159377,NR_027489,NR_026674	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	-,-,-,-,+,-,-,-,+	MTHFSD,MTHFSD,MTHFSD,MTHFSD,FOXC2,MTHFSD,MTHFSD,MTHFSD,FLJ30679	-3902,-3870,-3870,-3870,7829,-3870,-3870,-3870,-3836
chr9:107267378-107268384	chr9	+	107267390	107268038	True	NM_001004485,NM_001001919	chr9,chr9	+,-	OR13F1,OR13C4	-906,21507
chr17:78386353-78387641	chr17	+	78386485	78387677	True	NM_001164637,NR_029376,NM_001164638,NM_173627	chr17,chr17,chr17,chr17	+,-,+,+	FLJ35220,LOC100294362,FLJ35220,FLJ35220	1289,1341,1289,1289
chr19:29708012-29708701	chr19	+	29708041	29708663	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	-252054,-3905
chr1:153950501-153951713	chr1	+	153950549	153951749	True	NM_002870,NM_130898,NM_006694	chr1,chr1,chr1	-,+,-	RAB13,CREB3L4,JTB	7107,-10203,-98
chr19:2453735-2454145	chr19	+	2453799	2453959	True	NM_032737,NM_015675	chr19,chr19	-,+	LMNB2,GADD45B	3049,22163
chr2:71224153-71224754	chr2	+	71224361	71224557	True	NM_144582,NM_024933	chr2,chr2	-,+	TEX261,ANKRD53	-2360,-18850
chr19:42383750-42384770	chr19	+	42384087	42384693	True	NM_198977,NM_001783,NM_021601,NM_004706,NM_199002,NM_173506	chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,-	ARHGEF1,CD79A,CD79A,ARHGEF1,ARHGEF1,LYPD4	2573,-2948,-2948,2573,3752,-35579
chr5:41509893-41510372	chr5	+	41509974	41510112	True	NM_175921,NM_001005473	chr5,chr5	+,-	C5orf51,PLCXD3	394357,668
chr6:158735281-158735559	chr6	+	158735288	158735592	True	NM_001007466,NM_020245,NM_032861	chr6,chr6,chr6	+,+,-	TULP4,TULP4,SERAC1	-1647,-1647,-145976
chr16:29757796-29758766	chr16	+	29757900	29758594	True	NM_175900,NM_152338	chr16,chr16	-,+	C16orf54,ZG16	-560,30966
chr16:15980911-15981789	chr16	+	15981123	15981601	True	NM_144600,NM_004996	chr16,chr16	-,+	FOPNL,ABCC1	906,61832
chr12:123187733-123189728	chr12	+	123187907	123189604	True	NM_003677,NM_177551	chr12,chr12	+,-	DENR,GPR109A	47766,-3
chr12:123187733-123189728	chr12	+	123201622	123201672	False	NM_006018,NM_003677	chr12,chr12	-,+	GPR109B,DENR	-183,35698
chr1:66832939-66834416	chr1	+	66833199	66834431	True	NM_005478,NM_001037339	chr1,chr1	-,+	INSL5,PDE4B	432561,-35457
chr15:43421220-43422954	chr15	+	43421496	43422622	True	NM_024956,NM_174916	chr15,chr15	+,-	TMEM62,UBR1	3099,-23210
chr4:169031308-169033301	chr4	+	169031840	169032894	True	NM_017631,NM_007193	chr4,chr4	-,+	DDX60,ANXA10	207127,-18209
chr4:120548927-120549289	chr4	+	120549042	120549300	True	NM_033437,NM_033430,NR_037630,NM_001083	chr4,chr4,chr4,chr4	-,-,+,-	PDE5A,PDE5A,LOC645513,PDE5A	-11,-600,-173155,731
chr1:11317308-11318140	chr1	+	11317648	11317886	True	NM_004958,NM_013319	chr1,chr1	-,+	MTOR,UBIAD1	4772,15368
chr6:46888180-46888522	chr6	+	46888182	46888350	True	NM_001098518,NM_005588	chr6,chr6	-,+	GPR116,MEP1A	1414,-127147
chr12:54686540-54687556	chr12	+	54686540	54687332	True	NM_001136023,NM_006163,NR_002944	chr12,chr12,chr12	-,-,+	NFE2,NFE2,HNRNPA1P10	7509,2262,-12058
chr5:38586272-38587458	chr5	+	38586295	38587495	True	NM_002310,NM_182801	chr5,chr5	-,+	LIFR,EGFLAM	8062,-140718
chr22:42539903-42540340	chr22	+	42539919	42540329	True	NR_002570,NR_034118	chr22,chr22	-,+	CYP2D7P1,LOC100132273	296,-53034
chr22:42539903-42540340	chr22	+	42526248	42526380	False	NM_001025161,NM_000106,NR_034118	chr22,chr22,chr22	-,-,+	CYP2D6,CYP2D6,LOC100132273	553,553,-39363
chr8:37554212-37554472	chr8	+	37554276	37554521	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	-1026,51093
chr14:20021396-20021719	chr14	+	20021574	20021670	True	NM_001145442,NM_172194	chr14,chr14	-,+	POTEM,OR4Q3	-1302,193916
chr14:20021396-20021719	chr14	-	19551955	19552051	False	NM_001145442,NR_027480,NM_001005356	chr14,chr14,chr14	-,+,+	POTEM,POTEG,POTEG	468271,1313,1313
chrX:140787452-140788937	chrX	+	140788690	140788774	True	NM_145665,NM_013453,NM_032417	chrX,chrX,chrX	-,+,-	SPANXE,SPANXA1,SPANXD	-2035,-110889,-2092
chr12:113861986-113862699	chr12	+	113862198	113862486	True	NM_138432,NM_006843	chr12,chr12	+,-	SDSL,SDS	-2039,-20506
chr19:20738281-20739709	chr19	+	20738298	20739670	True	NM_001159293,NR_034060	chr19,chr19	-,+	ZNF737,ZNF85	9019,366388
chr8:120221995-120223543	chr8	+	120222004	120223359	True	NM_052886,NM_002546	chr8,chr8	+,-	MAL2,TNFRSF11B	-1445,-257621
chr17:74378566-74378847	chr17	+	74378650	74378849	True	NM_021972,NM_182965,NM_002766,NM_001142601,NM_001142602	chr17,chr17,chr17,chr17,chr17	+,+,-,+,+	SPHK1,SPHK1,PRPSAP1,SPHK1,SPHK1	1840,1840,-28420,1840,2439
chr16:48658775-48659264	chr16	+	48658881	48659059	True	NM_153029,NM_031490	chr16,chr16	-,+	N4BP1,LONP2	-14761,-380725
chr3:49505256-49506128	chr3	+	49505615	49505749	True	NM_001177639,NM_001177638,NM_001177635,NM_001177634,NM_001177637,NM_001177636,NM_004393,NM_001165928,NM_032316,NM_001177644,NM_001177640,NM_001177641,NM_001177642,NM_001177643	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	+,+,+,+,+,+,+,+,-,+,+,+,+,+	DAG1,DAG1,DAG1,DAG1,DAG1,DAG1,DAG1,DAG1,NICN1,DAG1,DAG1,DAG1,DAG1,DAG1	1815,1815,1815,1815,1815,1815,1815,1815,-38858,1815,1815,1815,1815,396
chr11:88067996-88069561	chr11	+	88068171	88069357	True	NM_001114173,NM_000372,NM_148170,NM_001814	chr11,chr11,chr11,chr11	-,+,-,-	CTSC,TYR,CTSC,CTSC	1635,841682,1635,1635
chr15:36871955-36872766	chr15	+	36872057	36872633	True	NM_001130010,NR_027320	chr15,chr15	+,-	C15orf41,CSNK1A1P1	-296,238126
chr9:69378815-69380465	chr2	-	95524758	95524838	False	NR_003366,NM_144705	chr2,chr2	-,+	ANKRD20A8P,TEKT4	-1938,12393
chr9:69378815-69380465	chr9	+	69379339	69380189	True	NM_001085457,NM_001098805	chr9,chr9	-,+	CBWD6,ANKRD20A4	-116746,1791
chr9:69378815-69380465	chr9	+	67924119	67924969	False	NR_027422,NM_001012419,NM_032250	chr9,chr9,chr9	-,+,+	FAM27B,ANKRD20A3,ANKRD20A1	-129930,1791,1791
chr9:69378815-69380465	chr9	-	44120948	44121209	False	NM_001145196,NM_001201380	chr9,chr9	-,+	FAM75A6,CNTNAP3B	-490218,-436115
chr9:69378815-69380465	chr9	-	43135924	43136185	False	NM_001012419,NR_026558,NR_027472,NM_001012421	chr9,chr9,chr9,chr9	-,+,-,-	ANKRD20A3,AQP7P3,LOC642929,ANKRD20A2	-2380,-277824,9349,-2380
chr9:69378815-69380465	chr9	+	42365724	42366574	False	NR_003670,NM_001012419,NM_001012421	chr9,chr9,chr9	-,+,+	KGFLP2,ANKRD20A3,ANKRD20A2	-346140,1728,1728
chr12:51155421-51156818	chr12	+	51155653	51156446	True	NM_005171,NM_001174130	chr12,chr12	+,-	ATF1,SLC11A2	1342,246657
chr5:165811499-165812885	chr5	+	165811680	165812801	True	NM_001122679,NR_029520	chr5,chr5	+,-	ODZ2,MIR103-1	899041,2175237
chr3:48701772-48702168	chr3	+	48701800	48702216	True	NM_033629,NM_001407	chr3,chr3	+,-	TREX1,CELSR3	-194622,-1452
chr9:35160714-35161984	chr9	+	35160801	35161860	True	NM_006377,NM_025182	chr9,chr9	+,-	UNC13B,KIAA1539	128,-44908
chrY:13309802-13310599	chrY	+	13309875	13310605	True	NR_001545,NR_033667	chrY,chrY	+,-	TTTY15,GYG2P1	1463692,1222834
chr9:13121136-13121771	chr9	+	13121157	13121787	True	NM_203403,NM_003829	chr9,chr9	+,-	C9orf150,MPDZ	-346196,128628
chrX:49090744-49091050	chrX	+	49090829	49090909	True	NM_005183,NM_014008	chrX,chrX	-,+	CACNA1F,CCDC22	-996,1017
chr17:42262936-42263368	chr17	+	42263059	42263155	True	NM_178542,NM_001076674,NM_024107,NM_177441	chr17,chr17,chr17,chr17	-,+,+,+	C17orf65,TMUB2,TMUB2,TMUB2	977,1198,1198,1418
chr15:93011029-93011471	chr15	+	93011249	93011466	True	NR_021493,NM_153040	chr15,chr15	-,+	LOC100144604,C15orf32	104078,3440
chr18:10543035-10544378	chr18	+	10543161	10544332	True	NM_003826,NM_022068	chr18,chr18	+,-	NAPG,FAM38B	-17339,604479
chr11:17191233-17192370	chr11	+	17191239	17192295	True	NM_002645,NM_005013	chr11,chr11	-,+	PIK3C2A,NUCB2	115,105990
chr10:124458624-124459309	chr10	+	124458683	124459343	True	NM_001010912,NR_003570	chr10,chr10	-,+	C10orf120,FLJ46361	45,56866
chr12:50478564-50478953	chr12	+	50478569	50478801	True	NM_003076,NM_139071,NM_013277	chr12,chr12,chr12	+,+,-	SMARCD1,SMARCD1,RACGAP1	181,181,-59262
chr12:48578515-48578722	chr12	+	48578630	48578722	True	NM_001013635,NM_001004134	chr12,chr12	+,-	C12orf68,OR10AD1	-1315,18403
chr8:69425255-69425677	chr8	+	69425345	69425689	True	NM_052958,NM_020361	chr8,chr8	+,-	C8orf34,CPA6	-182443,-766725
chr11:616056-616316	chr11	+	616056	616240	True	NM_004031,NM_000797,NM_004029,NM_001171968,NM_021924,NM_001572,NM_031264	chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,+,-,-,-,-,-	IRF7,DRD4,IRF7,CDHR5,CDHR5,IRF7,CDHR5	-328,21064,-57,8877,8877,-57,8877
chr15:78189072-78189323	chr15	+	78189072	78189278	True	NM_001101404,NR_027024	chr15,chr15	+,-	SH2D7,LOC645752	195648,29960
chr15:78189072-78189323	chr15	-	75982466	75982516	False	NM_175881,NM_001897	chr15,chr15	+,-	ODF3L1,CSPG4	33802,22723
chr7:103808932-103809249	chr7	+	103808931	103809234	True	NM_002553,NM_199000	chr7,chr7	-,+	ORC5,LHFPL3	39320,159869
chr20:5593299-5594624	chr20	+	5593466	5594361	True	NM_019593,NM_152504	chr20,chr20	-,+	GPCPD1,C20orf196	-1794,136681
chr8:109263604-109264798	chr8	+	109263962	109264393	True	NM_001568,NM_014673	chr8,chr8	-,+	EIF3E,TTC35	-3003,191459
chr20:39765056-39765519	chr20	+	39765087	39765509	True	NM_002660,NM_182811,NM_015035	chr20,chr20,chr20	+,+,-	PLCG1,PLCG1,ZHX3	651,651,163280
chr8:82754868-82755284	chr8	+	82754874	82755321	True	NM_022133,NM_152284,NM_152836,NM_152837	chr8,chr8,chr8,chr8	-,+,-,-	SNX16,CHMP4C,SNX16,SNX16	-353,-110237,-353,-353
chr13:96093656-96094907	chr13	+	96094023	96094837	True	NM_001105515,NM_182848,NM_001160100	chr13,chr13,chr13	-,+,+	ABCC4,CLDN10,CLDN10	-140336,-8222,-8222
chr5:68658496-68658910	chr5	+	68658593	68658803	True	NM_003187,NM_002873,NM_133340,NM_133338,NM_133339,NM_001015892,NM_001015891,NM_133344,NM_133341,NM_016283,NM_133343,NM_133342	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,+,+,+,+,-,-,+,+,-,+,+	TAF9,RAD17,RAD17,RAD17,RAD17,TAF9,TAF9,RAD17,RAD17,TAF9,RAD17,RAD17	6656,7728,8058,6835,8477,7087,7087,6835,8058,6656,6320,6835
chr21:46789202-46789652	chr21	+	46789300	46789646	True	NM_130445,NR_028082	chr21,chr21	+,-	COL18A1,NCRNA00175	35450,55359
chr1:26496811-26497790	chr1	+	26496887	26497390	True	NM_015871,NM_032588,NM_006314,NR_023345	chr1,chr1,chr1,chr1	+,-,+,+	ZNF593,TRIM63,CNKSR1,CNKSR1	-550,-102766,6590,6591
chr16:728591-728954	chr16	+	728633	728951	True	NM_001005920,NM_003961,NM_005861	chr16,chr16,chr16	-,+,+	JMJD8,RHBDL1,STUB1	5538,-2609,1163
chr3:6903203-6903498	chr3	+	6903310	6903528	True	NM_000844,NR_033378,NM_181874	chr3,chr3,chr3	+,-,+	GRM7,LOC100288428,GRM7	-559,1639866,-559
chr8:42625236-42626317	chr8	+	42625255	42626021	True	NM_001199279,NM_000749,NM_004198	chr8,chr8,chr8	-,+,-	CHRNA6,CHRNB3,CHRNA6	-1326,-72753,-1326
chr5:157875651-157876818	chr5	+	157875661	157876657	True	NM_014666,NM_173491	chr5,chr5	-,+	CLINT1,LSM11	-589478,-704957
chr20:33817425-33817951	chr20	+	33817494	33817708	True	NM_006690,NM_181468	chr20,chr20	+,-	MMP24,EIF6	-3007,54854
chr10:46969603-46970106	chr10	+	46969611	46970105	True	NM_014696,NM_181519,NM_031912	chr10,chr10,chr10	+,-,-	GPRIN2,SYT15,SYT15	23440,546,546
chr3:50243550-50245044	chr3	+	50243670	50244742	True	NM_006764,NM_006841	chr3,chr3	-,+	IFRD2,SLC38A3	85334,-1029
chr1:16067620-16068071	chr1	+	16067697	16068003	True	NM_001089591,NM_001013641,NM_207348	chr1,chr1,chr1	-,+,+	UQCRHL,TMEM82,SLC25A34	66241,913,-4939
chr22:39024311-39026229	chr22	+	39024507	39025613	True	NM_001002880,NM_001013647	chr22,chr22	+,-	CBY1,LOC646851	27044,27071
chrX:13061506-13061752	chrX	+	13061510	13061614	True	NM_021109,NM_174901	chrX,chrX	+,-	TMSB4X,FAM9C	-68335,1353
chr7:99678357-99678666	chr7	+	99678469	99678683	True	NM_032924,NM_006833,NM_017715	chr7,chr7,chr7	-,+,-	ZNF3,COPS6,ZNF3	738,7899,738
chr3:27763978-27764255	chr3	+	27763981	27764223	True	NM_005442,NM_182523	chr3,chr3	-,+	EOMES,CMC1	-196,518900
chr12:66696281-66696555	chr12	+	66696283	66696491	True	NM_016056,NM_033647	chr12,chr12	-,+	TMBIM4,HELB	-132476,4
chrX:110862132-110863919	chrX	+	110862572	110863732	True	NM_178153,NM_001039210	chrX,chrX	-,+	DCX,ALG13	-207112,60613
chr6:27177900-27178143	chr6	+	27177906	27178056	True	NM_005865,NM_080593	chr6,chr6	+,-	PRSS16,HIST1H2BK	37445,-63269
chr15:55881329-55881605	chr15	+	55881391	55881620	True	NM_001198784,NM_015617	chr15,chr15	+,-	FLJ27352,PYGO1	-180719,-341
chr20:60812655-60813240	chr20	+	60812733	60813109	True	NM_007232,NM_014835,NM_144498	chr20,chr20,chr20	-,+,+	HRH3,OSBPL2,OSBPL2	-17410,470,470
chr9:110253564-110253778	chr9	+	110253570	110253786	True	NM_004235,NM_002874	chr9,chr9	-,+	KLF4,RAD23B	-1523,-208077
chr2:70146812-70147279	chr2	+	70146820	70146979	True	NM_001202513,NM_001202514,NM_002357,NM_152792	chr2,chr2,chr2,chr2	+,+,+,-	MXD1,MXD1,MXD1,ASPRV1	-4707,-4707,-4707,42479
chr11:31841689-31841963	chr11	+	31841706	31841952	True	NM_001127612,NR_033971,NM_001604,NM_000280	chr11,chr11,chr11,chr11	-,+,-,-	PAX6,DKFZp686K1684,PAX6,PAX6	-2197,-3643,-8827,-8827
chr19:58341639-58342193	chr19	+	58341661	58342123	True	NR_024162,NM_001204818	chr19,chr19	-,+	FKBP1AP1,LOC100293516	-2831,-50
chr10:121354428-121354896	chr10	+	121354506	121354928	True	NM_001033925,NM_004281,NM_003252	chr10,chr10,chr10	-,+,-	TIAL1,BAG3,TIAL1	1663,55953,1663
chr7:92087198-92087819	chr7	+	92087582	92087850	True	NM_000466,NM_021167	chr7,chr7	-,+	PEX1,GATAD1	70045,-10868
chr19:9472812-9473148	chr19	+	9472994	9473201	True	NM_198535,NM_003451	chr19,chr19	-,+	ZNF699,ZNF177	-57199,494
chr15:78237206-78237776	chr15	+	78237242	78237782	True	NM_001101404,NR_027024	chr15,chr15	+,-	SH2D7,LOC645752	147144,-18054
chr17:46801377-46802696	chr17	+	46801426	46802734	True	NR_036150,NR_024103,NM_032391,NM_006361	chr17,chr17,chr17,chr17	-,+,-,-	MIR3185,NCRNA00253,PRAC,HOXB13	-225,-942,-1544,3427
chr15:75197282-75198047	chr15	+	75197286	75197646	True	NM_002435,NM_020447	chr15,chr15	+,-	MPI,C15orf17	-14928,1866
chrX:80372448-80372902	chrX	+	80372447	80372732	True	NM_030763,NM_003022	chrX,chrX	-,+	HMGN5,SH3BGRL	84766,84570
chr3:172145346-172145842	chr3	+	172145356	172145868	True	NM_018098,NM_198407	chr3,chr3	+,-	ECT2,GHSR	326429,20428
chr2:172378980-172379221	chr2	+	172379097	172379263	True	NM_024843,NM_001127383,NM_024770	chr2,chr2,chr2	+,+,-	CYBRD1,CYBRD1,METTL8	-282,-282,-87785
chr10:134757265-134757675	chr10	+	134757271	134757643	True	NM_173572,NM_001083909	chr10,chr10	-,+	C10orf93,GPR123	-1182,143765
chr1:228589829-228591037	chr1	+	228589961	228590849	True	NM_175055,NM_145214	chr1,chr1	+,-	HIST3H2BB,TRIM11	54958,3718
chr10:120514992-120515221	chr10	+	120515004	120515227	True	NM_199461,NM_153810	chr10,chr10	+,-	NANOS1,C10orf46	274000,-246
chr1:228022292-228023015	chr1	+	228022741	228023025	True	NM_183062,NM_023007	chr1,chr1	+,-	PRSS38,JMJD4	-19374,-99629
chr2:210450859-210452034	chr2	+	210450890	210451863	True	NM_152519,NM_002374,NM_031847,NM_031845	chr2,chr2,chr2,chr2	-,+,+,+	C2orf67,MAP2,MAP2,MAP2	584240,-6547,-6547,-6547
chr1:150550102-150551013	chr1	+	150550280	150550950	True	NM_182763,NM_021960,NM_001197320,NR_036211	chr1,chr1,chr1,chr1	-,-,-,+	MCL1,MCL1,MCL1,MIR4257	1316,1316,1316,-25933
chr12:103854095-103856044	chr12	+	103854108	103855785	True	NM_198521,NM_017564	chr12,chr12	-,+	C12orf42,STAB2	34012,125283
chr19:6466261-6466598	chr19	+	6466464	6466622	True	NM_139161,NM_174881,NM_024103	chr19,chr19,chr19	+,+,-	CRB3,CRB3,SLC25A23	-2255,-2255,-6683
chr17:5025057-5025802	chr17	+	5025087	5025834	True	NM_014519,NM_004505	chr17,chr17	-,+	ZNF232,USP6	613,5852
chr7:151218874-151219464	chr7	+	151218886	151219378	True	NM_005614,NR_034013	chr7,chr7	-,+	RHEB,LOC100131176	-1876,-112621
chr6:26507255-26507670	chr6	+	26507484	26507677	True	NM_001732,NM_024639	chr6,chr6	+,-	BTN1A1,ZNF322A	-6047,152337
chr10:32214588-32215244	chr10	+	32214618	32215247	True	NM_001026383,NM_018287	chr10,chr10	+,-	CCDC7,ARHGAP12	519793,2574
chr5:1881835-1882053	chr5	+	1881915	1882097	True	NM_016358,NM_004553	chr5,chr5	-,+	IRX4,NDUFS6	833,-80470
chr1:155579853-155580053	chr1	+	155579902	155579984	True	NM_018116,NM_018489	chr1,chr1	+,-	MSTO1,ASH1L	22,-47578
chr6:39280784-39281002	chr6	+	39280790	39280988	True	NM_001135105,NM_032115,NM_001135107,NM_001135106,NM_001135111,NM_031460,NM_002062	chr6,chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,-,-,-,+	KCNK16,KCNK16,KCNK16,KCNK16,KCNK17,KCNK17,GLP1R	9392,9392,9392,9392,1299,1298,-264284
chr3:32432558-32433103	chr3	+	32432585	32433075	True	NM_181472,NM_017801,NM_138410	chr3,chr3,chr3	+,-,+	CMTM7,CMTM6,CMTM7	87,111378,87
chr7:112063123-112063598	chr7	+	112063224	112063636	True	NM_001007245,NM_014705,NM_001197080	chr7,chr7,chr7	+,-,+	IFRD1,DOCK4,IFRD1	-76,-216762,-76
chr1:11740591-11740978	chr1	+	11740613	11741007	True	NM_198545,NM_006341	chr1,chr1	+,-	C1orf187,MAD2L2	10773,314
chr1:53923878-53924984	chr1	+	53924136	53925029	True	NR_002314,NM_033067	chr1,chr1	-,+	FLJ40434,DMRTB1	-18443,42
chrX:147087847-147088667	chrX	+	147087893	147088699	True	NM_152578,NR_024503	chrX,chrX	+,-	FMR1NB,FMR1-AS1	-25109,-84217
chr20:54822260-54822873	chr20	+	54822274	54822854	True	NM_003600,NM_019888	chr20,chr20	-,+	AURKA,MC3R	144547,933
chr13:21348515-21350029	chr13	+	21348634	21349674	True	NM_138284,NM_174928	chr13,chr13	+,-	IL17D,N6AMT2	-71210,-577
chr8:32452838-32453842	chr8	+	32452998	32453853	True	NM_001159999,NM_001159995,NM_032664,NM_001160001	chr8,chr8,chr8,chr8	+,+,-,+	NRG1,NRG1,FUT10,NRG1	59,59,876868,59
chr9:127632798-127633528	chr9	+	127632805	127633564	True	NM_007209,NM_030978	chr9,chr9	-,+	RPL35,ARPC5L	-8565,-1373
chr19:11201052-11201256	chr19	+	11201104	11201204	True	NM_001195802,NM_001195803,NM_001195800,NM_000527,NM_001195798,NM_001195799,NM_182513	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,+,-	LDLR,LDLR,LDLR,LDLR,LDLR,LDLR,SPC24	-1117,-1117,-1117,-1117,-1117,-1117,65330
chr4:128704171-128704418	chr4	+	128704268	128704457	True	NM_014278,NM_152778	chr4,chr4	+,-	HSPA4L,MFSD8	-866,182732
chr6:121753184-121753704	chr6	+	121753370	121753762	True	NM_000165,NM_152730	chr6,chr6	+,-	GJA1,C6orf170	2982,-97726
chr8:6874272-6875612	chr8	+	6874435	6875654	True	NM_005217,NR_036686,NR_036687,NM_001164452,NM_001042500,NM_004084	chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,+,-,-	DEFA3,DEFT1P,DEFT1P2,FAM90A14,DEFA1B,DEFA1	212,-8089,-8089,238771,219,219
chr8:6874272-6875612	chr8	+	6836219	6837345	False	NR_036687,NM_018361,NR_029386,NR_036686,NM_001042500,NM_004084	chr8,chr8,chr8,chr8,chr8,chr8	-,+,-,-,-,-	DEFT1P2,AGPAT5,DEFA10P,DEFT1P,DEFA1B,DEFA1	9957,-270392,-9584,9957,328,328
chr8:6874272-6875612	chr8	+	6855336	6856455	False	NM_001042500,NM_004084,NM_001164452,NR_036687,NR_036686	chr8,chr8,chr8,chr8,chr8	-,-,+,-,-	DEFA1B,DEFA1,FAM90A14,DEFT1P2,DEFT1P	321,321,257970,-8093,-8093
chr14:68182781-68183523	chr14	+	68182938	68183239	True	NM_016026,NM_152443	chr14,chr14	-,+	RDH11,RDH12	-20428,-14394
chr19:55626883-55627191	chr19	+	55626943	55627223	True	NM_017607,NM_017729	chr19,chr19	-,+	PPP1R12C,EPS8L1	1754,-35234
chr5:179228656-179229198	chr5	+	179228693	179229117	True	NR_031598,NM_054013,NM_145867,NM_001142299,NM_001142298,NM_014275	chr5,chr5,chr5,chr5,chr5,chr5	-,-,+,+,+,-	MIR1229,MGAT4B,LTC4S,SQSTM1,SQSTM1,MGAT4B	-3347,808,-7758,4885,4270,4885
chr11:85568215-85568702	chr11	+	85568276	85568736	True	NM_032943,NM_173556	chr11,chr11	-,+	SYTL2,CCDC83	-46098,-2183
chr17:79894398-79894695	chr17	+	79894485	79894701	True	NM_002359,NR_015454,NM_153824,NM_006907	chr17,chr17,chr17,chr17	-,+,-,-	MAFG,LOC92659,PYCR1,PYCR1	-8897,-8831,317,317
chr12:112848180-112849934	chr12	+	112848723	112849566	True	NM_002834,NM_000970,NM_001024662	chr12,chr12,chr12	+,-,-	PTPN11,RPL6,RPL6	6969,-1280,-1280
chr3:3168137-3168412	chr3	+	3168144	3168425	True	NM_175727,NM_182916	chr3,chr3	-,+	IL5RA,TRNT1	-16086,174
chr3:71802846-71803058	chr3	+	71802921	71803025	True	NM_173359,NM_018971,NM_001134649	chr3,chr3,chr3	-,+,-	EIF4E3,GPR27,EIF4E3	949,175,557
chr13:111601652-111603297	chr13	+	111601965	111603301	True	NM_017664,NM_001113511	chr13,chr13	-,+	ANKRD10,ARHGEF7	-34549,164322
chr2:27192706-27193540	chr2	+	27193010	27193350	True	NM_012326,NM_001134693	chr2,chr2	+,-	MAPRE3,OST4	174,101267
chr12:115121033-115121549	chr12	+	115121198	115121589	True	NM_138432,NM_016569,NM_005996	chr12,chr12,chr12	+,-,-	SDSL,TBX3,TBX3	-1261033,430,430
chr5:73937798-73938139	chr5	+	73937838	73938178	True	NM_003633,NM_000521	chr5,chr5	-,+	ENC1,HEXB	-589,42790
chr12:1705968-1706788	chr12	+	1705975	1706786	True	NM_030775,NM_152441	chr12,chr12	+,-	WNT5B,FBXL14	19435,-2644
chr12:47204158-47204475	chr12	+	47204376	47204462	True	NM_138371,NM_001143824	chr12,chr12	+,-	FAM113B,SLC38A4	405589,15374
chr15:64386721-64388042	chr15	+	64387096	64388032	True	NM_032231,NM_148955,NM_001014812,NM_003099,NM_152826	chr15,chr15,chr15,chr15,chr15	-,+,-,+,+	FAM96A,SNX1,FAM96A,SNX1,SNX1	-889,144,-889,144,144
chr4:123749204-123749411	chr4	+	123749228	123749358	True	NM_007083,NM_002006	chr4,chr4	-,+	NUDT6,FGF2	94451,-1424
chr2:207079943-207081271	chr2	+	207079972	207080792	True	NM_001098199,NM_005279,NR_002590	chr2,chr2,chr2	-,-,+	GPR1,GPR1,SNORA41	2029,2029,-53079
chr16:81071330-81072764	chr16	+	81071598	81072740	True	NM_020188,NM_015251	chr16,chr16	-,+	C16orf61,ATMIN	-31096,-2193
chr10:81368093-81368465	chr10	+	81368144	81368394	True	NM_005411,NM_001093770,NM_001098668,NM_001164644,NM_001164645,NM_001164646,NM_001164647	chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,-,+,+,+,+	SFTPA1,SFTPA1,SFTPA2,SFTPA1,SFTPA1,SFTPA1,SFTPA1	2300,2300,-47981,2300,2300,2300,2300
chr8:22420578-22421198	chr8	+	22420716	22421238	True	NR_027715,NM_001018003	chr8,chr8	-,+	FLJ14107,SORBS3	78534,1940
chr1:65890601-65891911	chr1	+	65890626	65891941	True	NM_001198683,NM_001198681,NM_017526,NR_029516,NM_001003680,NM_001003679,NM_002303	chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,-,+,+,+	LEPROT,LEPROT,LEPROT,MIR101-1,LEPR,LEPR,LEPR	-4555,-4287,-4555,-366435,-4351,-4351,-4351
chr1:117606650-117608074	chr1	+	117606772	117607969	True	NM_003594,NM_001145635	chr1,chr1	+,-	TTF2,TRIM45	-3880,56503
chrX:154608997-154610283	chrX	+	154609126	154610024	True	NR_036049,NM_001007524,NM_001007523,NM_012151,NM_080720,NR_036260,NR_036259,NM_001017991,NM_001017990	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,-,-,+,+	MIR1184-1,F8A3,F8A2,F8A1,H2AFB3,MIR1184-3,MIR1184-2,H2AFB2,H2AFB1	2874,1739,1739,1724,403,2874,2874,411,403
chrX:154608997-154610283	chrX	+	154112015	154112913	False	NR_036049,NM_001007524,NM_001007523,NM_012151,NM_080720,NR_036260,NM_019863,NR_036259,NM_001017990	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,-,-,-,+	MIR1184-1,F8A3,F8A2,F8A1,H2AFB3,MIR1184-3,F8,MIR1184-2,H2AFB1	2871,1736,1736,1721,403,2871,1715,2871,403
chrX:154608997-154610283	chrX	-	154689999	154690897	False	NR_036049,NM_001007524,NM_001007523,NM_012151,NM_080720,NR_036260,NR_036259,NM_001017991,NM_001017990	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,-,-,-,-,+,+,-,-	MIR1184-1,F8A3,F8A2,F8A1,H2AFB3,MIR1184-3,MIR1184-2,H2AFB2,H2AFB1	-2873,-1738,-1738,-1723,-403,-2873,-2873,-411,-403
chr17:33390396-33392294	chr17	+	33390605	33392298	True	NM_017559,NM_001017368	chr17,chr17	+,-	FNDC8,RFFL	56332,-72
chr22:42467855-42468719	chr22	+	42467879	42468748	True	NM_000262,NM_001002034,NM_033318	chr22,chr22,chr22	-,+,+	NAGA,FAM109B,C22orf32	-1033,1506,6950
chr6:105626813-105627210	chr6	+	105626831	105627211	True	NR_037157,NM_022361,NR_024539	chr6,chr6,chr6	+,-,-	C6orf112,POPDC3,POPDC3	-41325,697,-2701
chr18:12421979-12423255	chr18	+	12422718	12423300	True	NM_006796,NM_006553	chr18,chr18	-,+	AFG3L2,SLMO1	-45443,-14888
chr5:122759222-122760797	chr5	+	122759294	122760279	True	NM_001031812,NM_153223,NM_001166226	chr5,chr5,chr5	+,-,-	CSNK1G3,CEP120,CEP120	87513,-8,-8
chr9:35490183-35490406	chr9	+	35490248	35490442	True	NM_014806,NM_001099951	chr9,chr9	+,-	RUSC2,FAM166B	-292,73504
chr17:79793175-79793518	chr17	+	79793184	79793418	True	NM_001007533,NM_000160,NM_001093767,NM_207368	chr17,chr17,chr17,chr17	-,+,-,-	DYSFIP1,GCGR,FAM195B,FAM195B	-258,-31225,-2017,-2017
chr10:101845545-101846898	chr10	+	101845566	101846842	True	NR_024130,NM_001308	chr10,chr10	+,-	DNMBP-AS1,CPN1	-158658,-3924
chr6:35746026-35747163	chr6	+	35746055	35747199	True	NM_001010886,NM_207409,NM_001832	chr6,chr6,chr6	+,+,-	C6orf127,C6orf126,CLPS	1631,-1714,17953
chr11:119023109-119024584	chr11	+	119023239	119024556	True	NM_001145018,NM_022169,NM_001142505	chr11,chr11,chr11	-,+,+	CCDC153,ABCG4,ABCG4	42079,-3540,-2991
chr9:27286662-27287892	chr9	+	27286736	27287656	True	NR_026679,NM_001161585,NM_020641,NR_026687,NM_000459	chr9,chr9,chr9,chr9,chr9	-,-,-,-,+	NCRNA00032,C9orf11,C9orf11,NCRNA00032,TEK	-3945,9545,9545,-3945,-177644
chr3:39142558-39142836	chr3	+	39142664	39142834	True	NM_031899,NM_145755,NM_001105513	chr3,chr3,chr3	-,+,+	GORASP1,TTC21A,TTC21A	6346,6317,6317
chr9:42019283-42019500	chr9	+	42019380	42019448	True	NR_003670,NM_001012421	chr9,chr9	-,+	KGFLP2,ANKRD20A2	186,348854
chr9:42019283-42019500	chr9	-	46687593	46687661	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-3056863,-78
chr2:40644740-40646368	chr2	+	40644965	40646281	True	NM_001112800,NM_152390	chr2,chr2	-,+	SLC8A1,TMEM178	11213,-751981
chr14:35099667-35100107	chr14	+	35099667	35100105	True	NR_002937,NM_021249,NM_152233	chr14,chr14,chr14	+,-,-	C14orf19,SNX6,SNX6	309022,-352,-301
chr10:80832852-80833599	chr10	+	80832893	80833457	True	NR_024429,NR_015429,NR_024431,NM_020338	chr10,chr10,chr10,chr10	-,-,-,+	LOC283050,LOC283050,LOC283050,ZMIZ1	-5688,-5688,-5688,-4152
chr10:6335602-6336507	chr10	+	6335655	6336158	True	NM_004566,NM_000417	chr10,chr10	+,-	PFKFB3,IL2RA	-90873,-231322
chr2:96700885-96701155	chr2	+	96700890	96701200	True	NM_207328,NR_003698	chr2,chr2	-,+	GPAT2,LOC729234	-163,-24642
chr2:96700885-96701155	chr2	-	96454876	96455186	False	NM_207328,NM_138800	chr2,chr2	-,+	GPAT2,TRIM43	245591,-197161
chr4:49316028-49316573	chr4	+	49316507	49316591	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-328295,-407692
chr1:238052777-238053955	chr1	+	238052921	238053817	True	NR_027247,NM_021186	chr1,chr1	+,-	LOC100130331,ZP4	-27497,455
chr5:40679307-40679530	chr5	+	40679385	40679465	True	NM_012382,NM_000958	chr5,chr5	-,+	TTC33,PTGER4	76657,566
chr4:185137019-185137355	chr4	+	185137023	185137377	True	NM_020225,NM_153343	chr4,chr4	+,-	STOX2,ENPP6	-310565,1787
chrX:152710106-152710345	chrX	+	152710116	152710386	True	NM_080701,NM_001136273	chrX,chrX	-,+	TREX2,ZFP92	1609,-26386
chr2:27989751-27991722	chr2	+	27990195	27991759	True	NM_014860,NM_004891,NM_145330	chr2,chr2,chr2	-,+,+	SUPT7L,MRPL33,MRPL33	-103746,2824,2824
chr7:56374142-56375702	chr7	+	56374188	56375738	True	NR_029420,NR_026929	chr7,chr7	-,+	LOC650226,DKFZp434L192	140385,188177
chr10:75940509-75942217	chr10	+	75940648	75941696	True	NM_001123,NM_001202449,NM_207012	chr10,chr10,chr10	+,+,-	ADK,ADK,AP3M1	-4464,-4464,-29822
chr4:22593252-22594424	chr4	+	22593406	22594203	True	NM_001128432,NM_145290	chr4,chr4	+,-	GBA3,GPR125	100344,-75734
chr2:130938137-130938761	chr2	+	130938155	130938809	True	NM_017951,NM_025029,NM_017751,NR_033232,NR_033231,NR_033230,NM_001171083	chr2,chr2,chr2,chr2,chr2,chr2,chr2	-,+,-,-,-,-,-	SMPD4,MZT2B,SMPD4,SMPD4,SMPD4,SMPD4,SMPD4	571,691,571,571,571,1564,571
chr2:34218668-34219759	chr2	+	34218676	34219792	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-479787,-265392
chr5:174149369-174150061	chr5	+	174149516	174150046	True	NM_002449,NM_000794	chr5,chr5	+,-	MSX2,DRD1	1528,721176
chr7:75622211-75623614	chr7	+	75622456	75623230	True	NM_031925,NR_002955	chr7,chr7	-,+	TMEM120A,SNORA14A	812,-49406
chr7:156453784-156455700	chr7	+	156453857	156455354	True	NR_026865,NM_001184997	chr7,chr7	-,+	C7orf13,RNF32	-20509,-18238
chr19:17375096-17375443	chr19	+	17375170	17375438	True	NM_001033549,NM_031941,NM_014173	chr19,chr19,chr19	+,-,+	BABAM1,USHBP1,BABAM1	2793,156,2793
chr15:79584671-79586601	chr15	+	79585011	79586503	True	NM_001146341,NM_002891	chr15,chr15	+,-	ANKRD34C,RASGRF1	-9923,-201796
chr1:227920038-227920940	chr1	+	227920213	227920961	True	NR_024485,NM_053052,NR_024486,NM_001161465,NM_023007	chr1,chr1,chr1,chr1,chr1	+,+,+,-,-	LOC100130093,SNAP47,LOC100130093,JMJD4,JMJD4	-4024,1735,-4024,2201,2201
chr11:49584449-49585883	chr11	+	49585021	49585924	True	NR_027044,NM_004476	chr11,chr11	+,-	LOC440040,FOLH1	-5002,-354799
chr19:48326350-48326747	chr19	+	48326538	48326724	True	NM_000554,NM_198479	chr19,chr19	+,-	CRX,TPRX1	-1490,-19677
chr9:79794311-79794721	chr9	+	79794431	79794738	True	NM_001018037,NR_026668,NM_033305,NM_015186,NM_001018038	chr9,chr9,chr9,chr9,chr9	+,-,+,+,+	VPS13A,LOC100286938,VPS13A,VPS13A,VPS13A	-2124,-1598,-2124,-2124,-2124
chr19:56343856-56344851	chr19	+	56343901	56344764	True	NM_145007,NM_134444	chr19,chr19	-,+	NLRP11,NLRP4	3414,3179
chr9:69181885-69182086	chr9	+	69181919	69181989	True	NR_015361,NM_001098805	chr9,chr9	-,+	LOC440896,ANKRD20A4	-878,199991
chr22:27052844-27053080	chr22	+	27052923	27053075	True	NR_033321,NR_003491,NR_033320,NM_001887,NR_033319	chr22,chr22,chr22,chr22,chr22	+,+,+,-,+	MIAT,MIAT,MIAT,CRYBB1,MIAT	370,370,370,-38932,370
chrX:102863668-102864292	chrX	+	102863723	102864242	True	NM_001142418,NM_032926,NM_001006933	chrX,chrX,chrX	-,+,+	MORF4L2,TCEAL3,TCEAL3	77554,-940,-940
chrX:102863668-102864292	chrX	-	101396197	101396275	False	NM_001006938,NM_080390	chrX,chrX	-,+	TCEAL6,TCEAL2	1163,-15588
chr1:13419853-13421685	chr1	+	13420256	13421114	True	NM_001012276,NM_001098376,NM_001010890	chr1,chr1,chr1	-,+,+	PRAMEF8,PRAMEF15,PRAMEF9	-29491,61,61
chr1:13419853-13421685	chr1	-	12946109	12946159	False	NM_001009611,NM_023014	chr1,chr1	-,+	PRAMEF4,PRAMEF2	-84,-29219
chr1:13419853-13421685	chr1	+	13641053	13641911	False	NM_001012276,NM_001098376,NM_001010890	chr1,chr1,chr1	-,+,+	PRAMEF8,PRAMEF15,PRAMEF9	-29503,61,61
chr17:61992241-61992590	chr17	+	61992332	61992620	True	NM_001318,NM_022579,NM_022581,NM_000515,NM_022560,NM_022580,NM_022562,NM_022561,NR_002947,NM_022559	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,-,-,-,+,-	CSHL1,CSHL1,CSHL1,GH1,GH1,CSHL1,GH1,GH1,TCAM1P,GH1	-3714,-3714,-3714,3628,3628,-3714,3628,3628,-58011,3628
chr17:61992241-61992590	chr17	+	61999176	61999236	False	NM_000515,NM_022560,NM_022561,NM_022562,NR_002947,NM_022559	chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,+,-	GH1,GH1,GH1,GH1,TCAM1P,GH1	-2978,-2978,-2978,-2978,-64851,-2978
chr20:39906524-39907503	chr20	+	39907014	39907260	True	NM_015035,NM_022896	chr20,chr20	-,+	ZHX3,LPIN3	21541,62299
chr1:233086058-233086266	chr1	+	233086071	233086259	True	NM_032324,NM_014801	chr1,chr1	+,-	NTPCR,PCNXL2	110,345250
chr2:37533819-37534588	chr2	+	37533970	37534602	True	NM_012413,NM_005813	chr2,chr2	+,-	QPCT,PRKD3	37150,9670
chr15:63575517-63576571	chr15	+	63575947	63576287	True	NM_001218,NM_031301,NM_001145646	chr15,chr15,chr15	-,+,+	CA12,APH1B,APH1B	97848,-6249,-6249
chr11:63277287-63278874	chr11	+	63277318	63278875	True	NM_001142536,NM_001142537,NM_001142535,NM_033101,NM_001142538,NM_054108	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,-	LGALS12,LGALS12,LGALS12,LGALS12,LGALS12,HRASLS5	-3846,-1911,-3846,-3846,-1911,-18638
chr16:28218423-28219023	chr16	+	28218691	28219071	True	NM_015171,NM_001024401	chr16,chr16	-,+	XPO6,SBK1	4169,84768
chr1:13496754-13498726	chr1	+	13496897	13498168	True	NM_001045480,NM_001099850	chr1,chr1	+,-	PRAMEF16,PRAMEF18	-1694,-19328
chr1:13496754-13498726	chr1	+	13717731	13719002	False	NM_001099850,NM_001099851	chr1,chr1	-,+	PRAMEF18,PRAMEF17	-19326,-1694
chr19:48451822-48452168	chr19	+	48452118	48452181	True	NR_024219,NR_024221,NR_024218,NR_024217,NR_024216,NR_024220,NR_004437,NM_001128326	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,+,+,-	SNAR-C5,SNAR-C3,SNAR-C4,SNAR-C2,SNAR-A13,SNAR-C1,SNAR-A12,BSPH1	6757,1371,-9378,6757,-3997,6757,-3997,43299
chr19:48451822-48452168	chr19	+	48457507	48457570	False	NR_024219,NR_024220,NR_024221,NR_024217,NR_024216,NR_004437,NM_001128326	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,+,+,+,-	SNAR-C5,SNAR-C1,SNAR-C3,SNAR-C2,SNAR-A13,SNAR-A12,BSPH1	1368,1368,-4012,1368,-9386,-9386,37910
chr5:162888711-162890659	chr5	+	162888972	162890673	True	NM_012484,NM_012485,NM_145266,NM_001142556,NM_001142557	chr5,chr5,chr5,chr5,chr5	+,+,-,+,+	HMMR,HMMR,NUDCD2,HMMR,HMMR	-1515,-1515,-1829,-1515,-1515
chr17:38086680-38087671	chr17	+	38086992	38087087	True	NM_139280,NM_001195545	chr17,chr17	-,+	ORMDL3,LOC100505591	-3108,10639
chr15:43590217-43590550	chr15	+	43590258	43590598	True	NM_001012969,NM_052955	chr15,chr15	+,-	ADAL,TGM7	32273,3905
chr1:150205532-150206701	chr1	+	150205718	150206733	True	NM_012113,NM_001136478,NM_001136479,NM_030920	chr1,chr1,chr1,chr1	+,-,-,-	CA14,ANP32E,ANP32E,ANP32E	23484,1822,344,1822
chr8:91301822-91302466	chr8	+	91301822	91302478	True	NM_004929,NM_001359	chr8,chr8	-,+	CALB1,DECR1	-206715,-288300
chr16:32167996-32168755	chr16	+	32168049	32168755	True	NR_002827,NM_003414	chr16,chr16	-,+	HERC2P4,ZNF267	-4175,-283021
chr16:32167996-32168755	chr16	-	32781396	32782102	False	NM_016212	chr16	-	TP53TG3	-93343
chr16:32167996-32168755	chr16	+	33110945	33111651	False	NR_033866,NM_016212	chr16,chr16	-,+	LOC390705,TP53TG3	187101,93328
chr1:109655937-109656178	chr1	+	109656104	109656222	True	NM_001122961,NM_020775	chr1,chr1	-,+	C1orf194,KIAA1324	307,362
chr10:61898826-61900537	chr10	+	61898832	61900572	True	NM_001149,NM_001170406	chr10,chr10	-,+	ANK3,CDK1	253,637516
chr19:12073087-12073542	chr19	+	12073087	12073500	True	NM_001080411,NM_001012753	chr19,chr19	-,+	ZNF433,ZNF763	73078,2368
chr9:102585075-102585344	chr9	+	102585102	102585386	True	NM_173199,NM_015051,NM_173200,NM_006981	chr9,chr9,chr9,chr9	+,-,+,+	NR4A3,ERP44,NR4A3,NR4A3	-1022,275994,3622,-1022
chr7:16685767-16685979	chr7	+	16685766	16685928	True	NM_020319,NM_014038,NM_001159767,NR_027624	chr7,chr7,chr7,chr7	-,+,+,+	ANKMY2,BZW2,BZW2,BZW2	-324,-58,-58,-58
chr6:166722272-166723127	chr6	+	166722390	166723176	True	NM_175922,NR_027284	chr6,chr6	-,+	PRR18,LOC441177	-519,-321416
chr12:70137861-70138224	chr12	+	70138147	70138227	True	NM_175624,NM_175625,NM_032735,NM_022456,NM_175623	chr12,chr12,chr12,chr12,chr12	+,+,-,+,+	RAB3IP,RAB3IP,BEST3,RAB3IP,RAB3IP	-5581,-5032,-44951,-5581,-5032
chr5:35903620-35905215	chr5	+	35903975	35905144	True	NM_002185,NM_001042625	chr5,chr5	+,-	IL7R,CAPSL	-47035,33644
chr8:8003696-8004659	chr8	+	8004568	8004656	True	NR_031689,NR_024362	chr8,chr8	-,+	MIR548I3,FLJ10661	-57957,81435
chr8:8003696-8004659	chr8	-	12376038	12376088	False	NR_026789,NM_001137610	chr8,chr8	+,-	FAM66A,FAM86B2	-156561,-82186
chr4:106510128-106510909	chr4	+	106510170	106510691	True	NM_176869,NM_017700	chr4,chr4	-,+	PPA2,ARHGEF38	-114943,-36451
chr4:44421704-44421932	chr4	+	44421900	44421980	True	NM_198353,NM_021927	chr4,chr4	-,+	KCTD8,GUF1	28894,258452
chr7:142957656-142959596	chr7	+	142957874	142959170	True	NM_001143680,NM_001143681,NM_001143679,NM_015917,NM_014690	chr7,chr7,chr7,chr7,chr7	+,+,+,+,-	GSTK1,GSTK1,GSTK1,GSTK1,FAM131B	1351,1351,1351,1351,100055
chr9:139745527-139745954	chr9	+	139745634	139745992	True	NM_003792,NM_014172,NM_206920,NM_001080482,NM_001135861	chr9,chr9,chr9,chr9,chr9	-,+,+,+,+	EDF1,PHPT1,MAMDC4,C9orf172,PHPT1	14796,-2429,826,-6818,-2429
chr19:11307810-11308145	chr19	+	11307972	11308066	True	NM_015493,NM_018687,NM_001136191	chr19,chr19,chr19	-,+,-	KANK2,LOC55908,KANK2	-2706,42228,227
chrX:114939748-114940928	chrX	+	114939849	114939916	True	NM_020871,NM_001172335	chrX,chrX	-,+	LRCH2,PLS3	-471214,-112088
chr7:47581437-47583372	chr7	+	47581611	47583375	True	NM_001123065,NM_022748	chr7,chr7	+,-	C7orf65,TNS3	111466,38417
chr11:67979342-67979908	chr11	+	67979345	67979924	True	NM_017635,NM_002335,NM_016028	chr11,chr11,chr11	-,+,-	SUV420H1,LRP5,SUV420H1	910,100183,910
chr16:72030251-72030976	chr16	+	72030578	72031015	True	NM_001361,NM_181536	chr16,chr16	+,-	DHODH,PKD1L3	11627,2912
chr12:121455139-121456137	chr12	+	121455576	121456160	True	NM_022895,NM_000545	chr12,chr12	-,+	C12orf43,HNF1A	-1276,-39091
chr5:118407384-118408849	chr5	+	118407510	118408676	True	NM_173666,NM_005509	chr5,chr5	-,+	DTWD2,DMXL1	-83270,-477
chr6:136203990-136205580	chr6	+	136204146	136205512	True	NM_001099286,NM_018945	chr6,chr6	-,+	FAM54A,PDE7B	365987,-31363
chr13:44543305-44543881	chr13	+	44543339	44543793	True	NM_144974,NR_026955	chr13,chr13	-,+	CCDC122,NCRNA00284	-89513,52677
chr13:44543305-44543881	chr11	+	46393274	46394559	False	NM_001012333,NM_002391,NM_001012334,NM_000741	chr11,chr11,chr11,chr11	+,+,+,-	MDK,MDK,MDK,CHRM4	8743,8659,8058,13598
chr4:83718965-83719165	chr4	+	83719057	83719171	True	NM_024672,NM_001037582,NM_024906	chr4,chr4,chr4	+,-,-	THAP9,SCD5,SCD5	102665,889,889
chr14:21154246-21154694	chr14	+	21154355	21154731	True	NM_001097577,NM_002937,NM_001145,NM_194431,NM_001001968	chr14,chr14,chr14,chr14,chr14	+,+,+,+,-	ANG,RNASE4,ANG,RNASE4,OR6S1	2200,-2034,-2070,2200,-44505
chr16:16856653-16858142	chr16	+	16857193	16858191	True	NR_036447,NM_001079528	chr16,chr16	+,-	PKD1P1,ABCC6	-445778,-539865
chr2:70053078-70053636	chr2	+	70053077	70053569	True	NM_178439,NM_152792	chr2,chr2	+,-	GMCL1,ASPRV1	3248,135888
chr3:108827601-108828712	chr3	+	108827831	108828573	True	NM_014429,NR_033977	chr3,chr3	-,+	MORC1,FLJ22763	8470,26987
chr10:96828672-96830100	chr10	+	96828951	96830137	True	NM_000770,NM_001198855,NM_207321,NM_001198854,NM_001198853	chr10,chr10,chr10,chr10,chr10	-,-,+,-,-	CYP2C8,CYP2C8,C10orf129,CYP2C8,CYP2C8	-71,-71,123819,-71,-71
chr1:173886026-173887749	chr1	+	173886204	173887587	True	NM_001122770,NM_000488	chr1,chr1	+,-	ZBTB37,SERPINC1	-48763,-37
chr2:172087689-172088478	chr2	+	172087819	172088134	True	NM_001136554,NM_001164821	chr2,chr2	-,+	TLK1,DCAF17	5,202626
chr5:78340318-78341875	chr5	+	78340320	78341841	True	NM_013391,NM_001178005	chr5,chr5	-,+	DMGDH,BHMT2	23665,23705
chr2:34182504-34182809	chr2	+	34182700	34182776	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-443817,-229416
chr1:206947035-206948544	chr1	+	206947125	206948154	True	NM_153758,NM_000572	chr1,chr1	+,-	IL19,IL10	24060,-1286
chr8:20034986-20036705	chr8	+	20035739	20036677	True	NM_003053,NM_001135691,NM_001693,NM_001142325,NM_001142324	chr8,chr8,chr8,chr8,chr8	-,-,+,-,-	SLC18A1,SLC18A1,ATP6V1B2,SLC18A1,SLC18A1	4090,4090,18026,4090,4090
chr3:49377631-49377889	chr3	+	49377743	49377911	True	NM_003363,NM_199443,NR_036233	chr3,chr3,chr3	-,-,+	USP4,USP4,MIR4271	-207,-207,-66241
chr6:27115517-27115759	chr6	+	27115539	27115601	True	NM_080596,NM_003495,NM_080593,NR_036096	chr6,chr6,chr6,chr6	+,+,-,+	HIST1H2AH,HIST1H4I,HIST1H2BK,MIR3143	-686,-8506,-902,-189
chr1:24117800-24118269	chr1	+	24117913	24118143	True	NM_001008216,NM_000403,NM_001127621,NM_007260	chr1,chr1,chr1,chr1	-,-,-,+	GALE,GALE,GALE,LYPLA2	9201,8941,7967,-319
chr1:183440790-183440996	chr1	+	183440892	183440970	True	NM_201569,NM_201568,NM_173156,NM_001174061,NM_015039	chr1,chr1,chr1,chr1,chr1	+,+,+,+,-	SMG7,SMG7,SMG7,SMG7,NMNAT2	535,535,535,535,-53258
chr12:12963321-12964717	chr12	+	12963439	12964601	True	NM_016355,NM_201224,NM_006143	chr12,chr12,chr12	+,+,-	DDX47,DDX47,GPR19	1678,1678,-114318
chr7:150882499-150883495	chr7	+	150882551	150882999	True	NM_001142460,NM_080871,NM_001142459,NM_019015	chr7,chr7,chr7,chr7	-,-,-,+	ASB10,ASB10,ASB10,CHPF2	1529,1970,1529,46585
chr17:4489544-4490191	chr17	+	4489582	4489907	True	NM_198501,NM_001114974,NM_153338	chr17,chr17,chr17	+,+,-	SMTNL2,SMTNL2,GGT6	-2370,-1812,-25706
chr2:7022827-7023547	chr2	+	7022875	7023532	True	NM_207315,NM_080657	chr2,chr2	-,+	CMPK2,RSAD2	-16939,-5130
chr16:70561837-70562566	chr16	+	70561959	70562473	True	NM_015386,NR_037420,NR_003696,NR_003079,NM_012426,NM_001195139	chr16,chr16,chr16,chr16,chr16,chr16	-,+,+,+,+,-	COG4,MIR3647,SNORD111B,SNORD111,SF3B3,COG4	-4502,928,931,9434,-4327,-4502
chr3:32149137-32149881	chr3	+	32149174	32149440	True	NM_017784,NM_015141	chr3,chr3	-,+	OSBPL10,GPD1L	-125832,-1222
chr16:11947574-11947835	chr16	+	11947771	11947849	True	NM_015659,NM_001192	chr16,chr16	-,+	RSL1D1,TNFRSF17	-2329,111114
chr9:130026850-130027114	chr9	+	130026853	130027071	True	NM_032293,NM_012098	chr9,chr9	+,-	GARNL3,ANGPTL2	-148,-141809
chr3:10363289-10364383	chr3	+	10363442	10364094	True	NR_024273,NR_024272,NM_183352,NM_001136232,NR_024146	chr3,chr3,chr3,chr3,chr3	-,-,-,-,+	SEC13,SEC13,SEC13,SEC13,GHRLOS	-584,-584,-587,-717,-36055
chr13:102553063-102553817	chr13	+	102553062	102553703	True	NM_004115,NM_004791	chr13,chr13	-,+	FGF14,ITGBL1	15342,-448147
chr10:105213470-105213965	chr10	+	105213523	105213913	True	NR_024552,NM_015916,NM_004210,NM_001001412	chr10,chr10,chr10,chr10	-,-,+,-	CALHM2,CALHM2,NEURL,CALHM1	-1361,-1361,39821,4785
chr3:13464204-13464812	chr3	+	13464511	13464855	True	NM_024827,NM_024923	chr3,chr3	+,-	HDAC11,NUP210	56859,-2702
chr1:15910115-15910728	chr1	+	15910135	15910441	True	NM_032341,NM_024758	chr1,chr1	+,-	DDI2,AGMAT	33511,1222
chr11:3398577-3399394	chr11	+	3398703	3399108	True	NM_001130519,NM_001130520,NM_007152,NR_024248	chr11,chr11,chr11,chr11	-,-,-,+	ZNF195,ZNF195,ZNF195,LOC650368	1391,1391,1391,3082
chr4:120548619-120548927	chr4	+	120548618	120548906	True	NM_033437,NM_033430,NR_037630,NM_001083	chr4,chr4,chr4,chr4	-,-,+,-	PDE5A,PDE5A,LOC645513,PDE5A	383,-176,-172731,1125
chr11:64020678-64021162	chr11	+	64020761	64021077	True	NM_138689,NM_000932,NM_001184883	chr11,chr11,chr11	-,+,+	PPP1R14B,PLCB3,PLCB3	-6348,-1817,-1817
chr14:95234461-95234683	chr14	+	95234465	95234727	True	NR_015340,NM_173849	chr14,chr14	+,-	SERPINA13,GSC	-127454,1822
chr7:57083189-57083936	chr7	+	57083193	57083653	True	NR_036270,NR_036102	chr7,chr7	-,+	MIR4283-2,MIR3147	-59622,389077
chr7:57083189-57083936	chr7	-	63021304	63021764	False	NR_028349,NR_036246	chr7,chr7	-,+	LOC100287834,MIR4283-1	-161885,59703
chr10:69989237-69990895	chr10	+	69989751	69990882	True	NM_145178,NM_012207	chr10,chr10	-,+	ATOH7,HNRNPH3	1036,100885
chr11:4597366-4598900	chr11	+	4597629	4598701	True	NM_001005170,NM_144663	chr11,chr11	+,-	OR52I2,C11orf40	9319,399
chr1:160055633-160055861	chr1	+	160055778	160055886	True	NM_052868,NM_004983	chr1,chr1	-,+	IGSF8,KCNJ9	12572,-4469
chr7:91585106-91585462	chr7	+	91585294	91585445	True	NM_006980,NM_147185	chr7,chr7	-,+	MTERF,AKAP9	-75278,-15164
chr1:200860701-200861052	chr1	+	200860735	200861043	True	NM_001142569,NM_018265,NM_017596	chr1,chr1,chr1	+,+,-	C1orf106,C1orf106,KIF21B	2955,-147,131835
chr6:3160237-3160846	chr6	+	3160347	3160747	True	NM_001069,NR_026650	chr6,chr6	-,+	TUBB2A,BPHL	-2564,-41472
chr11:6499573-6500060	chr11	+	6499616	6500108	True	NM_012192,NM_006458,NM_033278,NM_012402	chr11,chr11,chr11,chr11	+,-,-,-	FXC1,TRIM3,TRIM3,ARFIP2	2568,-4411,-4411,2537
chrX:48458027-48459337	chrX	+	48458031	48459181	True	NM_001166426,NM_017883,NM_033518,NR_029427	chrX,chrX,chrX,chrX	+,+,-,+	WDR13,WDR13,SLC38A5,WDR13	-1858,-2202,-129387,-2202
chr7:134893225-134893641	chr7	+	134893311	134893631	True	NM_014149,NM_182489	chr7,chr7	-,+	WDR91,STRA8	2735,23099
chr16:3144444-3145441	chr16	+	3144659	3145013	True	NM_001042428,NM_032805	chr16,chr16	+,-	ZNF205,ZSCAN10	17549,-1798
chr3:49133205-49133646	chr3	+	49133217	49133665	True	NM_005051,NM_199070,NM_017730,NM_198880	chr3,chr3,chr3,chr3	-,+,-,-	QARS,NDUFAF3,QRICH1,QRICH1	8556,-74195,-1713,-1713
chr1:1052662-1052929	chr1	+	1052662	1052976	True	NM_017891,NR_029639	chr1,chr1	-,+	C1orf159,MIR200B	-926,49507
chr6:14942505-14943093	chr6	+	14942587	14943007	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	303519,720346
chr19:48828062-48828349	chr19	+	48828186	48828350	True	NM_144577,NM_001425	chr19,chr19	-,+	CCDC114,EMP3	-4854,278
chr1:48381588-48382898	chr1	+	48381956	48382786	True	NM_001194986,NM_001011547	chr1,chr1	-,+	LOC388630,SLC5A9	79826,305570
chr11:6123266-6124211	chr11	+	6123837	6124039	True	NM_001004052,NM_001005181	chr11,chr11	-,+	OR52B2,OR56B4	67567,4969
chr15:28623578-28624049	chr15	+	28623651	28624085	True	NM_004667,NR_033351,NR_033353	chr15,chr15,chr15	-,+,+	HERC2,GOLGA8F,GOLGA8G	-56356,82,82
chr15:28623578-28624049	chr15	-	28777841	28778275	False	NR_036443,NR_033351,NR_033353	chr15,chr15,chr15	+,-,-	HERC2P9,GOLGA8F,GOLGA8G	121312,-82,-82
chr15:28623578-28624049	chr15	+	20767913	20767975	False	NM_001145004,NR_027411	chr15,chr15	-,+	GOLGA6L6,GOLGA8C	-20799,-290
chr15:28623578-28624049	chr15	-	22715810	22715860	False	NR_027407,NM_001001413	chr15,chr15	-,+	GOLGA8DP,GOLGA6L1	-82,20385
chr15:28623578-28624049	chr15	+	23434937	23434987	False	NR_002824,NR_033350	chr15,chr15	-,+	HERC2P2,GOLGA8E	-56678,82
chr15:28623578-28624049	chr15	+	23599736	23599786	False	NR_002824,NR_033350	chr15,chr15	-,+	HERC2P2,GOLGA8E	-221477,-164717
chr10:103345857-103346390	chr10	+	103345858	103346168	True	NM_015448,NM_013274,NR_033406,NM_001174085,NM_001174084	chr10,chr10,chr10,chr10,chr10	+,-,-,-,-	DPCD,POLL,POLL,POLL,POLL	1920,1909,1909,1909,1909
chr11:22851364-22853028	chr11	+	22851657	22852838	True	NM_005256,NM_148893	chr11,chr11	+,-	GAS2,SVIP	-155389,-275
chr5:31194328-31194625	chr5	+	31194357	31194655	True	NM_004932,NM_001100412	chr5,chr5	+,-	CDH6,DROSHA	-612,337677
chr3:97692637-97693032	chr3	+	97692643	97692973	True	NM_032778,NM_001042533,NM_153182,NM_054106	chr3,chr3,chr3,chr3	-,-,-,+	MINA,MINA,MINA,OR5AC2	-1419,-1419,-1348,113043
chr9:136398250-136398508	chr9	+	136398389	136398513	True	NM_014694,NM_001080483,NM_001145320	chr9,chr9,chr9	+,-,+	ADAMTSL2,TMEM8C,ADAMTSL2	1461,-8321,-1154
chr1:110527035-110527340	chr1	+	110527140	110527388	True	NM_006621,NM_006492	chr1,chr1	+,-	AHCYL1,ALX3	27,85984
chrX:18442033-18443170	chrX	+	18442074	18443103	True	NR_033717,NM_003159	chrX,chrX	-,+	SCML2,CDKL5	-69230,621
chr17:43679676-43681072	chr17_ctg5_hap1	+	546451	546892	False	NM_001193465,NR_034172	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	KIAA1267,LOC644246	16605,48551
chr17:43679676-43681072	chr17_ctg5_hap1	-	1187515	1187956	False	NR_026901,NR_037772	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LOC644172,CRHR1	482,-17062
chr17:43679676-43681072	chr17_ctg5_hap1	-	1407075	1407516	False	NR_002940,NM_016632	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LRRC37A4,ARL17A	73860,106426
chr17:43679676-43681072	chr17	+	43680226	43680667	True	NR_026901,NR_037772	chr17,chr17	-,+	LOC644172,CRHR1	-478,17042
chr17:43679676-43681072	chr17	-	44320012	44320453	False	NM_001193465,NR_034172	chr17,chr17	-,+	KIAA1267,LOC644246	-17272,-49131
chr2:130876895-130878060	chr2	+	130877388	130878092	True	NM_001099771,NR_033903	chr2,chr2	-,+	POTEF,LOC285103	8753,9103
chr2:130876895-130878060	chr2	-	131975971	131976675	False	NM_001009993,NM_001083538	chr2,chr2	-,+	FAM168B,POTEE	-124967,-98
chr11:44888187-44888761	chr11	+	44888203	44888783	True	NM_130783,NM_001076787	chr11,chr11	+,-	TSPAN18,TP53I11	-102279,83875
chr14:21497958-21498389	chr14	+	21498145	21498425	True	NM_001012264,NM_201536,NM_201537,NM_201535,NM_173846,NM_201541,NM_016250,NM_201540,NM_201538,NM_201539	chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14,chr14	-,-,-,-,+,-,-,-,-,-	RNASE13,NDRG2,NDRG2,NDRG2,TPPP2,NDRG2,NDRG2,NDRG2,NDRG2,NDRG2	4569,-4210,-4210,-4210,-15,-4881,-4210,-4881,-4881,-4881
chr15:63244832-63245296	chr15	+	63244838	63245069	True	NM_000366,NM_015920	chr15,chr15	+,-	TPM1,RPS27L	89768,204729
chr17:79359765-79360385	chr17	+	79359807	79360411	True	NM_001080519,NM_178520	chr17,chr17	+,-	BAHCC1,TMEM105	13128,-55333
chr5:14665146-14665466	chr5	+	14665178	14665434	True	NM_138348,NR_037899	chr5,chr5	+,-	FAM105B,LOC100128508	-446,111757
chr1:21058011-21058258	chr1	+	21058136	21058284	True	NM_001103160,NM_001103161,NM_032409	chr1,chr1,chr1	-,-,+	SH2D5,SH2D5,PINK1	899,899,-98239
chr1:212524910-212525524	chr1	+	212525077	212525240	True	NR_004389,NM_001198862	chr1,chr1	+,-	SNORA16B,TMEM206	919,63058
chr5:169535192-169536052	chr5	+	169535540	169536068	True	NM_144769,NM_012188,NM_001129891	chr5,chr5,chr5	+,+,-	FOXI1,FOXI1,FAM196B	-2674,-2674,-127796
chr6:14687932-14689318	chr6	+	14688225	14689351	True	NM_001031713,NM_004973	chr6,chr6	-,+	CCDC90A,JARID2	-873436,557175
chr1:160852951-160853346	chr1	+	160853164	160853385	True	NM_002348,NM_017625	chr1,chr1	+,-	LY9,ITLN1	-87289,1626
chr11:123612389-123613329	chr11	+	123612547	123613222	True	NM_003455,NM_001005197	chr11,chr11	-,+	ZNF202,OR8D4	-184,163916
chr7:99005261-99005809	chr7	+	99005304	99005594	True	NM_003910,NM_014891	chr7,chr7	+,-	BUD31,PDAP1	1006,761
chr19:545292-545505	chr19	+	545299	545389	True	NM_005317,NM_182577	chr19,chr19	+,-	GZMM,ODF3L2	-1323,-70316
chr16:66587353-66588865	chr16	+	66587405	66588555	True	NM_001204098,NM_001204099,NM_001172645,NM_016951,NM_001172643,NM_001202509,NM_001040138,NM_001172644,NM_004614,NM_181641,NM_181640,NM_016326	chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,+,-,+,-,+,+,-,-,+,+,+	CKLF-CMTM1,CKLF-CMTM1,TK2,CKLF,TK2,CKLF-CMTM1,CKLF,TK2,TK2,CKLF,CKLF,CKLF	-998,-998,-3090,-998,-3211,-998,-998,-3090,-3090,-998,-998,-998
chr17:46692175-46692562	chr17	+	46692236	46692590	True	NM_024016,NM_004502,NM_018952,NR_033205	chr17,chr17,chr17,chr17	-,-,-,+	HOXB8,HOXB7,HOXB6,LOC404266	65,-3853,-9902,-18967
chr2:106865963-106867717	chr2	+	106866041	106867436	True	NR_003506,NM_025076	chr2,chr2	+,-	PLGLA,UXS1	135332,-55246
chr2:106865963-106867717	chr2	+	108534311	108534546	False	NR_024439,NM_021815	chr2,chr2	-,+	LOC729121,SLC5A7	-91728,68448
chr12:24716367-24716699	chr12	+	24716483	24716747	True	NR_030625,NM_152989	chr12,chr12	+,-	MIR920,SOX5	-351183,-1103
chr17:25960269-25960663	chr17	+	25960330	25960712	True	NM_000625,NM_009587,NM_002308,NR_024043	chr17,chr17,chr17,chr17	-,+,+,+	NOS2,LGALS9,LGALS9,LGALS9	166893,-2207,-2207,-2207
chr11:113191329-113192521	chr11	+	113191388	113192538	True	NM_017868,NR_034101	chr11,chr11	+,-	TTC12,LOC100288346	-6188,-46765
chr10:46763654-46763868	chr10	+	46763723	46763893	True	NR_027632,NR_026566,NR_003611	chr10,chr10,chr10	+,-,-	FAM35B,BMS1P1,BMS1P5	133747,-831,-831
chr10:46763654-46763868	chr10	+	47244488	47244658	False	NR_027634,NR_024495	chr10,chr10	+,-	FAM35B2,LOC642826	135061,-994
chr10:46763654-46763868	chr10	-	48184698	48184868	False	NM_002900,NR_024495	chr10,chr10	-,+	RBP3,LOC642826	206173,987
chr10:46763654-46763868	chr10	+	48953460	48953630	False	NR_026566,NM_153034,NR_003611	chr10,chr10,chr10	-,+,-	BMS1P1,ZNF488,BMS1P5	-831,-598422,-831
chr2:171672374-171672576	chr2	+	171672457	171672538	True	NM_013445,NM_000817,NR_027433	chr2,chr2,chr2	+,+,-	GAD1,GAD1,LOC440925	661,661,-101380
chr12:69358457-69359472	chr12	+	69358511	69359375	True	NM_001874,NM_002392	chr12,chr12	-,+	CPM,MDM2	-1491,-156591
chr15:65204308-65204630	chr15	+	65204413	65204532	True	NM_182703,NM_001127889	chr15,chr15	+,-	ANKDD1A,SPG21	-363,77331
chr19:35994100-35995111	chr19	+	35994222	35995064	True	NM_001190348,NM_001126059,NM_001126058,NM_001126057,NM_001190347,NM_001190349,NM_001035516,NM_001126056,NR_033746,NM_014364,NM_033317	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,-,-,+,-	DMKN,DMKN,DMKN,DMKN,DMKN,DMKN,DMKN,DMKN,DMKN,GAPDHS,DMKN	9546,6377,9546,9546,9546,9546,-1409,9546,6398,29249,9546
chr12:54692145-54693658	chr12	+	54692370	54693703	True	NM_001136023,NM_006163,NR_002944	chr12,chr12,chr12	-,-,+	NFE2,NFE2,HNRNPA1P10	1139,-2826,-17889
chr6:167574770-167575167	chr6	+	167574795	167575174	True	NM_005299,NM_001145121	chr6,chr6	-,+	GPR31,TCP10L2	-3476,8906
chr13:33159819-33160535	chr13	+	33159829	33160351	True	NM_033111,NM_015032	chr13,chr13	-,+	N4BP2L2,PDS5B	-46893,212
chrY:24549667-24550636	chrY	+	24550052	24550135	True	NM_001006117,NR_002175	chrY,chrY	+,-	RBMY1J,TTTY6B	-484,37508
chrY:24549667-24550636	chrY	-	24328575	24328646	False	NM_001006117,NR_002175,NM_152585	chrY,chrY,chrY	-,+,-	RBMY1J,TTTY6B,RBMY1F	495,-37501,495
chr7:123387487-123387895	chr7	+	123387487	123387865	True	NM_003941,NR_002731	chr7,chr7	-,+	WASL,HYALP1	1301,66327
chr1:36094015-36095333	chr1	+	36094016	36095086	True	NM_001199780,NM_178548	chr1,chr1	-,+	PSMB2,TFAP2E	2109,-55097
chr1:937470-937875	chr1	+	937523	937755	True	NM_005101,NM_021170,NM_001142467	chr1,chr1,chr1	+,-,-	ISG15,HES4,HES4	11091,-1971,-1971
chr2:96782955-96783272	chr2	+	96782973	96783111	True	NR_003698,NM_000682	chr2,chr2	+,-	LOC729234,ADRA2B	-106725,-1085
chr10:91172695-91174489	chr10	+	91173087	91174370	True	NM_213606,NM_012420	chr10,chr10	-,+	SLC16A12,IFIT5	120993,20
chr3:187607566-187607823	chr3	+	187607630	187607868	True	NR_034062,NM_001706	chr3,chr3	+,-	LOC100131635,BCL6	-187532,-144117
chr1:165900152-165902043	chr1	+	165900293	165901738	True	NM_019026,NR_037431	chr1,chr1	-,+	TMCO1,MIR3658	-162158,-23187
chr8:30914941-30916349	chr8	+	30915171	30916206	True	NM_000553,NM_001015508	chr8,chr8	+,-	WRN,PURG	-24453,-23940
chr20:32153018-32154266	chr20	+	32153075	32153884	True	NM_005093,NM_001039709,NM_031231	chr20,chr20,chr20	+,+,-	CBFA2T2,CBFA2T2,NECAB3	-2963,-2963,108439
chr18:13612389-13612628	chr18	+	13612409	13612657	True	NM_001003675,NM_001003674,NM_001098801,NM_181483,NM_004338	chr18,chr18,chr18,chr18,chr18	+,+,-,+,+	C18orf1,C18orf1,C18orf19,C18orf1,C18orf1	-795,-795,113984,8209,8209
chr8:29995205-29997022	chr8	+	29995482	29997006	True	NM_001100916,NM_006571	chr8,chr8	-,+	MBOAT4,DCTN6	5244,16806
chrX:47051588-47052822	chrX	+	47051930	47052805	True	NM_003334,NM_153280,NR_024235	chrX,chrX,chrX	+,+,-	UBA1,UBA1,NDUFB11	395,-1792,-47321
chr17:37322364-37322728	chr17	+	37322499	37322669	True	NM_000981,NM_001143968	chr17,chr17	+,-	RPL19,ARL5C	33866,-85
chr9:35563975-35564417	chr9	+	35563978	35564411	True	NM_001099951,NM_001135999,NM_001164310	chr9,chr9,chr9	-,+,-	FAM166B,RUSC2,FAM166B	-82,-25400,-82
chr10:26506113-26506351	chr10	+	26506213	26506335	True	NM_001134366,NM_001012750,NM_000818	chr10,chr10,chr10	+,-,+	GAD2,ABI1,GAD2	-1029,643731,-1029
chr14:105191527-105191764	chr14	+	105191551	105191799	True	NM_199165,NM_005163,NM_152328	chr14,chr14,chr14	+,-,+	ADSSL1,AKT1,ADSSL1	4428,68189,-1068
chr19:19140606-19142197	chr19	+	19140762	19141898	True	NM_001017392,NM_001199196,NM_033415,NM_014884	chr19,chr19,chr19,chr19	-,+,+,-	SUGP2,ARMC6,ARMC6,SUGP2	2532,2488,2488,2532
chr4:124319136-124319404	chr4	+	124319141	124319417	True	NM_198041,NM_199327,NM_005841	chr4,chr4,chr4	-,+,+	NUDT6,SPRY1,SPRY1	-475018,-1236,1265
chr5:168728180-168728727	chr5	+	168728236	168728746	True	NM_017785,NM_003062	chr5,chr5	+,-	CCDC99,SLIT3	281891,-103
chr13:46172995-46173385	chr13	+	46173025	46173371	True	NM_182542,NM_152719	chr13,chr13	-,+	FAM194B,SPERT	16553,103074
chr6:116848599-116848948	chr6	+	116848796	116848968	True	NM_001139444,NM_153036	chr6,chr6	-,+	BET3L,FAM26D	17855,1226
chr19:53606979-53607443	chr19	+	53607052	53607427	True	NM_001191055,NM_033288,NM_001102603,NM_198893	chr19,chr19,chr19,chr19	+,-,-,-	HERV-V2,ZNF160,ZNF160,ZNF160	-59112,-365,-365,-365
chr16:28548907-28549265	chr16	+	28549058	28549245	True	NM_138414,NM_001042483,NM_012385	chr16,chr16,chr16	+,-,-	CCDC101,NUPR1,NUPR1	16003,1301,1301
chr3:44619573-44619995	chr3	+	44619666	44619841	True	NM_173658,NM_181489	chr3,chr3	+,-	ZNF660,ZNF445	6614,-100504
chr3:159095114-159096429	chr3	+	159095140	159096446	True	NM_002888,NR_037483	chr3,chr3	-,+	RARRES1,MIR3919	-644865,-94756
chr16:62067695-62068454	chr16	+	62067808	62068488	True	NM_001796,NM_024860	chr16,chr16	-,+	CDH8,SETD6	2301,-3518476
chr9:99776643-99776976	chr9	+	99776771	99776836	True	NM_001045477,NR_002894	chr9,chr9	+,-	FAM22G,HIATL2	-85539,-909
chr9:99776643-99776976	chr9	-	97135865	97135930	False	NM_017561,NM_032558	chr9,chr9	-,+	FAM22F,HIATL1	-44939,902
chr9:98637350-98637563	chr9	+	98637363	98637550	True	NM_001010895,NR_023390,NR_023389	chr9,chr9,chr9	+,-,-	C9orf102,C9orf130,C9orf130	349,759,759
chr5:137896855-137897919	chr5	+	137896908	137897968	True	NM_001964,NR_002913	chr5,chr5	+,-	EGR1,SNORD63	-95779,-109
chr17:54990013-54990423	chr17	+	54990018	54990214	True	NM_021626,NM_005082	chr17,chr17	+,-	SCPEP1,TRIM25	65253,1251
chr9:138799396-138799822	chr9	+	138799627	138799823	True	NM_015447,NM_020822	chr9,chr9	-,+	CAMSAP1,KCNT1	-622,-205647
chr9:112214470-112215348	chr9	+	112214943	112215389	True	NM_001145369,NM_001145370,NM_001037293	chr9,chr9,chr9	-,-,+	PTPN3,PTPN3,PALM2	-1279,-1279,187678
chr5:1632928-1633569	chr5	+	1632953	1633395	True	NR_003713,NM_004553	chr5,chr5	-,+	LOC728613,NDUFS6	775,168100
chr5:1632928-1633569	chr5	-	272451	272893	False	NM_145265,NM_013232	chr5,chr5	-,+	CCDC127,PDCD6	-54154,-766
chr11:67221054-67222034	chr11	+	67221226	67221867	True	NM_145200,NM_206997,NM_001018070	chr11,chr11,chr11	+,-,-	CABP4,GPR152,CORO1B	950,-1026,-9963
chr9:139583802-139584310	chr9	+	139583882	139584136	True	NR_029695,NM_006412,NM_001012727	chr9,chr9,chr9	+,-,-	MIR126,AGPAT2,AGPAT2	-18879,-1971,-1971
chr1:151691146-151692822	chr1	+	151691394	151692818	True	NM_001144956,NM_001172649,NM_007185,NM_001172648	chr1,chr1,chr1,chr1	+,-,-,-	RIIAD1,CELF3,CELF3,CELF3	1194,-2512,-2104,-2602
chr12:30831031-30832066	chr12	+	30831333	30831748	True	NM_001190995,NM_001080509	chr12,chr12	-,+	IPO8,TSPAN11	-1155,248089
chr9:35833283-35833693	chr9	+	35833353	35833589	True	NM_001042589,NM_016446,NM_001042590,NM_001012446	chr9,chr9,chr9,chr9	+,+,+,-	TMEM8B,TMEM8B,TMEM8B,C9orf128	-4175,-4182,-3891,-4609
chr2:74408335-74408917	chr2	+	74408600	74408929	True	NM_018221,NM_006636	chr2,chr2	-,+	MOBKL1B,MTHFD2	-2605,16760
chr12:54424184-54424609	chr12	+	54424320	54424646	True	NM_004503,NM_018953,NR_030753,NR_026658	chr12,chr12,chr12,chr12	+,+,+,-	HOXC6,HOXC5,MIR615,LOC100240735	-2185,2185,3087,51011
chr9:84302776-84303039	chr9	+	84302898	84303055	True	NM_005077,NR_026851	chr9,chr9	-,+	TLE1,FAM75D5	591,225296
chr4:114876790-114877983	chr4	+	114876944	114877962	True	NM_001128174,NM_024590	chr4,chr4	+,-	UGT8,ARSJ	641648,22966
chr19:16124801-16125338	chr19	+	16124830	16125386	True	NR_026828,NM_021187	chr19,chr19	+,-	LOC126536,CYP4F11	1057,-79154
chr2:155568156-155569104	chr2	+	155568280	155569121	True	NM_019845,NM_002239	chr2,chr2	-,+	RPRM,KCNJ3	-1232958,-13247
chr8:67526217-67526430	chr8	+	67526223	67526479	True	NM_019607,NM_001080416,NM_001144755	chr8,chr8,chr8	+,-,-	C8orf44,MYBL1,MYBL1	53307,-743,-743
chr15:64389784-64390811	chr15	+	64389833	64390639	True	NM_032231,NM_001014812,NM_148955,NM_003099,NM_152826	chr15,chr15,chr15,chr15,chr15	-,-,+,+,+	FAM96A,FAM96A,SNX1,SNX1,SNX1	-3626,-3626,-1716,-1716,-1716
chr20:46605305-46605679	chr20	+	46605431	46605723	True	NR_026958,NM_198596	chr20,chr20	+,-	LOC284749,SULF2	382930,-190071
chr20:54822873-54823428	chr20	+	54822894	54823448	True	NM_003600,NM_019888	chr20,chr20	-,+	AURKA,MC3R	143953,339
chr14:95266456-95267232	chr14	+	95266538	95267225	True	NR_015340,NM_173849	chr14,chr14	+,-	SERPINA13,GSC	-159528,-30039
chr21:30357305-30358072	chr21	+	30357304	30357942	True	NM_015565,NM_001001992	chr21,chr21	-,+	LTN1,USP16	7389,38995
chr1:161575970-161576643	chr1	+	161576276	161576636	True	NM_000570,NR_024151	chr1,chr1	-,+	FCGR3B,HSPA7	24572,-478
chr1:161575970-161576643	chr1	+	161494644	161494694	False	NM_000569,NM_002155	chr1,chr1	-,+	FCGR3A,HSPA6	25174,-659
chr8:97518705-97518959	chr8	+	97518904	97518966	True	NM_015942,NM_002998	chr8,chr8	-,+	MTERFD1,SDC2	-245108,-13073
chr3:49848855-49849323	chr3	+	49848868	49849244	True	NM_003335,NM_203370	chr3,chr3	-,+	UBA7,C3orf54	2197,-8232
chr11:128460654-128461709	chr11	+	128460694	128461738	True	NM_001167681,NM_001143820	chr11,chr11	+,-	FLI1,ETS1	102072,-3241
chr17:37782729-37783134	chr17	+	37782741	37783005	True	NM_181505,NM_006160,NM_032192	chr17,chr17,chr17	+,-,+	PPP1R1B,NEUROD2,PPP1R1B	1747,-18566,173
chr19:6593325-6594841	chr19	+	6593570	6594827	True	NM_001252,NM_003811	chr19,chr19	-,+	CD70,TNFSF9	-2407,-62611
chr10:105109693-105110051	chr10	+	105109863	105109933	True	NM_006951,NM_032154,NM_001011663	chr10,chr10,chr10	+,-,-	TAF5,PCGF6,PCGF6	17790,1008,1008
chr7:73625278-73625478	chr7	+	73625287	73625435	True	NM_032463,NM_032464,NM_014146,NM_002914	chr7,chr7,chr7,chr7	+,+,+,-	LAT2,LAT2,LAT2,RFC2	-1251,-1251,-1251,43353
chrX:153673227-153673441	chrX	+	153673226	153673446	True	NM_001009934,NM_004699,NM_001493	chrX,chrX,chrX	-,+,+	DNASE1L1,FAM50A,GDI1	-32799,-792,-8018
chr17:5185272-5185639	chr17	+	5185548	5185678	True	NM_207103,NM_004703,NM_001083585	chr17,chr17,chr17	-,+,+	C17orf87,RABEP1,RABEP1	-47465,-41,-41
chr21:45979359-45979602	chr21	+	45979374	45979590	True	NM_198696,NM_198687,NM_198693	chr21,chr21,chr21	-,+,-	KRTAP10-3,KRTAP10-4,KRTAP10-2	-731,14015,-7986
chr22:44288657-44289347	chr22	+	44288656	44289104	True	NM_001177675,NM_025225,NM_138814	chr22,chr22,chr22	-,+,-	PNPLA5,PNPLA3,PNPLA5	-763,30514,-763
chr6:15042350-15043879	chr6	+	15042555	15043754	True	NM_004973,NM_032122	chr6,chr6	+,-	JARID2,DTNBP1	202772,619585
chr17:56603988-56604191	chr17	+	56604008	56604072	True	NM_002876,NM_004687,NM_004574,NM_080415,NM_080416,NR_037156,NR_037155	chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,-,-,-,-,-,-	RAD51C,MTMR4,SEPT4,SEPT4,SEPT4,SEPT4,SEPT4	165890,-8757,2756,5421,5421,1352,2756
chr12:120807356-120807787	chr12	+	120807545	120807781	True	NM_012240,NM_002442	chr12,chr12	+,-	SIRT4,MSI1	-67472,-587
chr1:153509282-153510622	chr1	+	153509445	153510586	True	NM_002962,NM_002961,NM_019554,NM_014624,NM_006271	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	S100A5,S100A4,S100A4,S100A6,S100A1	3706,7747,7747,-728,90286
chr1:228021082-228022224	chr1	+	228021273	228022061	True	NM_183062,NM_023007	chr1,chr1	+,-	PRSS38,JMJD4	-17919,-98161
chr12:121408772-121409671	chr12	+	121408915	121409629	True	NR_024345,NM_000545	chr12,chr12	-,+	NCRNA00262,HNF1A	516,6919
chr8:42992025-42993992	chr8	+	42992173	42993492	True	NR_027669,NM_152419	chr8,chr8	-,+	RNF170,HGSNAT	-240307,2099
chrX:20283942-20284210	chrX	+	20283953	20284041	True	NM_001173456,NM_004586	chrX,chrX	+,-	PDHA1,RPS6KA3	-921993,759
chr4:103784741-103786503	chr4	+	103785380	103786196	True	NM_001008388,NM_181890,NM_181893	chr4,chr4,chr4	+,-,-	CISD2,UBE2D3,UBE2D3	3938,3892,3863
chr7:5936539-5937632	chr7	+	5936603	5937580	True	NM_001099697,NM_015622	chr7,chr7	-,+	RSPH10B2,CCZ1	72784,760
chr7:5936539-5937632	chr7	-	6866687	6867130	False	NM_198097,NM_173565	chr7,chr7	-,+	C7orf28B,RSPH10B	-761,-72998
chr16:85589065-85589619	chr16	+	85589064	85589618	True	NM_001134473,NM_016095	chr16,chr16	+,-	KIAA0182,GINS2	55410,133020
chr19:51628629-51628898	chr19	+	51628634	51628894	True	NM_145232,NM_001198558,NM_014441	chr19,chr19,chr19	-,+,+	CTU1,SIGLEC9,SIGLEC9	-16987,-548,-548
chr15:82728399-82729317	chr15	+	82729144	82729213	True	NR_026811,NM_198181	chr15,chr15	-,+	LOC80154,GOLGA6L9	69161,-7010
chr15:82728399-82729317	chr15	+	90839442	90839566	False	NR_028287,NR_028052	chr15,chr15	-,+	GABARAPL3,NGRN	53237,-30672
chr15:82728399-82729317	chr15	-	82634476	82634618	False	NM_001164465,NR_004847	chr15,chr15	-,+	GOLGA6L10,UBE2Q2P2	7211,12667
chr15:82728399-82729317	chr15	+	82811314	82811437	False	NR_033936,NR_033579	chr15,chr15	-,+	LOC727849,LOC440297	-12962,-57991
chr15:82728399-82729317	chr15	-	82931803	82931945	False	NR_033936,NR_033579	chr15,chr15	+,-	LOC727849,LOC440297	12847,54605
chr15:82728399-82729317	chr15	-	83010760	83010902	False	NM_001164465,NR_004847	chr15,chr15	-,+	GOLGA6L10,UBE2Q2P2	7419,12870
chr15:82728399-82729317	chr15	+	83195657	83195780	False	NR_033936,NR_033579	chr15,chr15	-,+	LOC727849,LOC440297	-12727,-65748
chr15:82728399-82729317	chr15	+	83105669	83105738	False	NR_026811,NM_198181	chr15,chr15	-,+	LOC80154,GOLGA6L9	77214,-7010
chr15:82728399-82729317	chr15	-	78206832	78207011	False	NM_001101404,NR_027024	chr15,chr15	+,-	SH2D7,LOC645752	177915,12302
chr15:82728399-82729317	chr15	+	72959198	72959323	False	NR_002780,NM_018652	chr15,chr15	-,+	HIGD2B,GOLGA6B	19292,-12286
chr15:82728399-82729317	chr15	-	74362610	74362735	False	NM_001130136,NM_001038640	chr15,chr15	+,-	ISLR2,GOLGA6A	58979,12281
chr15:82728399-82729317	chr15	+	75563052	75563177	False	NR_030360,NM_001145224	chr15,chr15	-,+	MIR631,GOLGA6D	82974,12004
chr15:82728399-82729317	chr15	+	75587331	75587456	False	NR_030360,NM_001145224	chr15,chr15	-,+	MIR631,GOLGA6D	58695,-12275
chr11:78042939-78044180	chr11	+	78043213	78044207	True	NM_020798,NM_012296	chr11,chr11	+,-	USP35,GAB2	-143413,8769
chr8:86878862-86880685	chr8	+	86878904	86880401	True	NR_003594	chr8	-	REXO1L2P	-38733
chr13:50746198-50747134	chr13	+	50746240	50746379	True	NR_002612,NR_002183	chr13,chr13	-,+	DLEU2,ST13P4	-46563,-137
chr10:97321433-97321715	chr10	+	97321566	97321732	True	NM_024991,NM_015385,NM_001098175	chr10,chr10,chr10	-,-,+	SORBS1,SORBS1,ENTPD1	-395,-395,149803
chr17:25669667-25670104	chr17	+	25669790	25670151	True	NM_000625,NM_134265	chr17,chr17	-,+	NOS2,WSB1	457454,-48735
chr6:8650243-8651680	chr6	+	8650370	8651631	True	NR_004855,NM_015948	chr6,chr6	+,-	HULC,SLC35B3	810,-214576
chr15:43910941-43911597	chr15	+	43911024	43911591	True	NM_020990,NM_153700	chr15,chr15	+,-	CKMT1B,STRC	-25830,-26
chr15:43910941-43911597	chr15	+	44010486	44011053	False	NM_001015001,NR_002318	chr15,chr15	+,-	CKMT1A,CATSPER2P1	-25460,27500
chr17:48554866-48555563	chr17	+	48554896	48555579	True	NM_018346,NM_001267	chr17,chr17	+,-	RSAD1,CHAD	610,-8669
chr6:160680891-160681505	chr6	+	160680986	160681442	True	NM_003058,NM_021977	chr6,chr6	-,+	SLC22A2,SLC22A3	-1023,87982
chr11:18274181-18274538	chr11	+	18274269	18274344	True	NM_001127380,NM_001199744,NM_030754,NM_000331	chr11,chr11,chr11,chr11	-,-,-,+	SAA2,SAA2-SAA4,SAA2,SAA1	-4048,-4048,-4048,13463
chr12:9346672-9347353	chr12	+	9346683	9347407	True	NM_002864,NR_036466	chr12,chr12	-,+	PZP,LOC100499405	13614,45191
chr17:7488233-7488574	chr17	+	7488400	7488524	True	NM_004870,NM_001040059,NR_002912,NR_024603,NM_006942,NM_001251,NR_002604	chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,-,+,+	MPDU1,CD68,SNORA67,MPDU1,SOX15,CD68,SNORD10	-1486,-5645,-7178,-1486,5016,-5646,-8322
chr18:74242178-74242469	chr18	+	74242191	74242467	True	NR_015417,NM_014643	chr18,chr18	+,-	LOC284276,ZNF516	-1630,-35045
chr2:113238778-113239126	chr2	+	113238837	113239115	True	NM_153712,NM_001164463	chr2,chr2	+,-	TTL,RGPD8	627,-47615
chr17:29055150-29056221	chr17	+	29055599	29056113	True	NM_015986,NR_024187	chr17,chr17	-,+	CRLF3,SUZ12P	95715,-19024
chr21:33954641-33955615	chr21	+	33954690	33955620	True	NM_058187,NM_144659	chr21,chr21	+,-	C21orf63,TCP10L	-169989,2282
chr12:49352259-49352567	chr12	+	49352265	49352378	True	NM_001659,NM_005430	chr12,chr12	-,+	ARF3,WNT1	-1013,19857
chr21:35289206-35289656	chr21	+	35289207	35289395	True	NM_032476,NM_001697	chr21,chr21	+,-	MRPS6,ATP5O	156427,-1049
chr5:179050369-179050809	chr5	+	179050564	179050802	True	NM_005520,NM_001040452	chr5,chr5	-,+	HNRNPH1,RUFY1	-30,-63883
chr11:33185054-33185643	chr11	+	33185359	33185429	True	NR_034027,NM_001033505,NM_001033506,NM_001326	chr11,chr11,chr11,chr11	+,-,-,-	LOC338739,CSTF3,CSTF3,CSTF3	-2207,-2322,-2322,-2322
chr10:44143252-44143696	chr10	+	44143311	44143711	True	NM_001005368,NM_145312,NM_006973	chr10,chr10,chr10	-,+,-	ZNF32,ZNF485,ZNF32	491,-41507,665
chr18:43299810-43301290	chr18	+	43300193	43301287	True	NM_015865,NM_001146037,NM_001146036,NM_020964,NM_001128588	chr18,chr18,chr18,chr18,chr18	+,+,+,-,+	SLC14A1,SLC14A1,SLC14A1,EPG5,SLC14A1	2804,5630,2804,246068,2804
chr8:66753387-66753588	chr8	+	66753436	66753612	True	NM_001145838,NM_002604	chr8,chr8	+,-	MTFR1,PDE7A	-171379,193
chr3:49375949-49376404	chr3	+	49376140	49376297	True	NM_003363,NM_199443,NR_036233	chr3,chr3,chr3	-,-,+	USP4,USP4,MIR4271	1296,1296,-64644
chr18:28725061-28725610	chr18	+	28725205	28725635	True	NM_004948,NM_001942	chr18,chr18	-,+	DSC1,DSG1	17234,172416
chr3:133380919-133382151	chr3	+	133381089	133382166	True	NM_001063,NM_007027	chr3,chr3	+,-	TF,TOPBP1	82810,-352
chrX:69283977-69285905	chrX	+	69284211	69285691	True	NM_001002254,NM_207320	chrX,chrX	-,+	AWAT2,OTUD6A	-14423,-1934
chr15:63885547-63886247	chr15	+	63885557	63886248	True	NR_034080,NM_203373	chr15,chr15	-,+	LOC100130855,FBXL22	6835,3303
chr1:900477-900951	chr1	+	900628	900792	True	NM_015658,NM_198317,NM_001160184,NM_032129	chr1,chr1,chr1,chr1	-,+,+,+	NOC2L,KLHL17,PLEKHN1,PLEKHN1	-5949,-4712,1084,1084
chr19:37703402-37704811	chr19	+	37703869	37704521	True	NM_152279,NM_152604	chr19,chr19	-,+	ZNF585B,ZNF383	-2418,12844
chr10:105726543-105726856	chr10	+	105726560	105726726	True	NM_024928,NM_014720	chr10,chr10	-,+	OBFC1,SLK	-48515,743
chr17:46605941-46606937	chr17	+	46605988	46606568	True	NM_002144,NR_033201	chr17,chr17	-,+	HOXB1,LOC404266	1754,61254
chr1:11333983-11334757	chr1	+	11333992	11334327	True	NM_004958,NM_013319	chr1,chr1	-,+	MTOR,UBIAD1	-11384,-788
chr10:32216357-32216933	chr10	+	32216434	32216980	True	NM_001026383,NM_018287	chr10,chr10	+,-	CCDC7,ARHGAP12	518060,840
chr20:13621704-13622041	chr20	+	13621839	13622096	True	NM_001039375,NM_017714	chr20,chr20	+,-	C20orf7,TASP1	143575,-2256
chr20:32077157-32077419	chr20	+	32077185	32077472	True	NM_001032999,NM_003098	chr20,chr20	+,-	CBFA2T2,SNTA1	455,-45487
chr15:89630411-89630738	chr15	+	89630411	89630695	True	NM_007011,NM_152924,NM_000326	chr15,chr15,chr15	+,+,-	ABHD2,ABHD2,RLBP1	685,685,134277
chr21:43490889-43491418	chr21	+	43490937	43491259	True	NM_173568,NR_027243,NM_001199527,NM_001004416,NM_001199528	chr21,chr21,chr21,chr21,chr21	+,-,+,+,+	UMODL1,C21orf128,UMODL1,UMODL1,UMODL1	166,37435,-7920,166,-7920
chr22:35519321-35521255	chr22	+	35519327	35521290	True	NM_001008494,NM_005368	chr22,chr22	+,-	ISX,MB	-57248,492145
chrX:47224106-47225021	chrX	+	47224623	47225002	True	NM_003446,NM_007130	chrX,chrX	+,-	ZNF157,ZNF41	4996,117400
chr5:112848580-112849362	chr5	+	112848756	112849276	True	NM_022828,NM_001085377	chr5,chr5	+,-	YTHDC2,MCC	114,-24229
chr1:28415982-28416375	chr1	+	28416145	28416298	True	NR_027268,NM_018053,NM_001990	chr1,chr1,chr1	-,+,-	LOC653566,XKR8,EYA3	6824,-129699,-997
chr5:132113186-132113402	chr5	+	132113218	132113440	True	NM_001039780,NM_001098811,NM_001098813,NM_015146,NM_001098812	chr5,chr5,chr5,chr5,chr5	+,-,-,-,-	CCNI2,SEPT8,SEPT8,SEPT8,SEPT8	-30132,-151,171,-151,-151
chr3:123601556-123602655	chr3	+	123601789	123602586	True	NM_053025,NM_053027,NM_053026,NR_028136,NM_053028	chr3,chr3,chr3,chr3,chr3	-,-,-,+,-	MYLK,MYLK,MYLK,KALRN,MYLK	613,613,613,210971,613
chr14:102610173-102611131	chr14	+	102610407	102610988	True	NM_144574,NM_181308,NM_181302,NM_181291,NM_001017963	chr14,chr14,chr14,chr14,chr14	+,+,+,+,-	WDR20,WDR20,WDR20,WDR20,HSP90AA1	-4246,-4246,-4246,-4246,-4321
chr19:17514463-17514705	chr19	+	17514582	17514674	True	NM_004335,NM_138401	chr19,chr19	-,+	BST2,FAM125A	1760,16237
chr10:134754744-134755260	chr10	+	134754899	134755205	True	NM_173572,NM_001083909	chr10,chr10	-,+	C10orf93,GPR123	934,146203
chr16:82661945-82662152	chr16	+	82662032	82662137	True	NM_005792,NM_001257	chr16,chr16	-,+	MPHOSPH6,CDH13	-458203,-1505
chr19:13905971-13906294	chr19	+	13906074	13906278	True	NR_036515,NM_023072	chr19,chr19	-,+	LOC284454,ZSWIM4	40875,-5
chr5:70359854-70361181	chr5	+	70359941	70360131	True	NM_022877,NM_001515	chr5,chr5	+,-	SMN2,GTF2H2	-139233,3422
chr5:70359854-70361181	chr5	-	69714566	69714756	False	NR_033417,NR_033968	chr5,chr5	+,-	GTF2H2B,LOC100049076	-3426,136453
chr5:70359854-70361181	chr5	-	68859420	68859610	False	NR_027439,NM_001042490,NM_001098728	chr5,chr5,chr5	-,+,+	LOC100272216,GTF2H2D,GTF2H2C	69477,-3403,-3426
chr12:110880267-110881933	chr12	+	110880566	110881773	True	NM_005719,NM_013300	chr12,chr12	-,+	ARPC3,C12orf24	6448,24458
chr8:71488228-71488846	chr8	+	71488416	71488698	True	NM_001011720,NM_014294	chr8,chr8	+,-	XKR9,TRAM1	92901,32054
chr10:44060136-44060622	chr10	+	44060266	44060475	True	NM_005674,NM_001099283,NM_001099282,NM_145312,NM_001099284	chr10,chr10,chr10,chr10,chr10	-,-,-,+,-	ZNF239,ZNF239,ZNF239,ZNF485,ZNF239	3483,9642,9641,41379,9642
chr16:31468873-31469462	chr16	+	31469141	31469503	True	NM_001136509,NM_024742,NM_001105247	chr16,chr16,chr16	-,+,+	ZNF843,ARMC5,ARMC5	-14793,813,813
chr11:322461-322850	chr11	+	322609	322892	True	NM_021034,NM_003641	chr11,chr11	-,+	IFITM3,IFITM1	-1695,-8669
chr3:48885346-48885660	chr3	+	48885415	48885633	True	NM_006321,NM_004157	chr3,chr3	+,-	ARIH2,PRKAR2A	70647,-145
chr4:113154192-113155105	chr4	+	113154218	113154987	True	NM_018569,NM_052864,NM_001128426	chr4,chr4,chr4	+,-,+	AP1AR,TIFA,AP1AR	-1382,52123,-1382
chr1:178991909-178993696	chr1	+	178992001	178993723	True	NM_014864,NM_001136000	chr1,chr1	+,-	FAM20B,ABL2	1350,118551
chr21:45596597-45596876	chr21	+	45596629	45596909	True	NM_198155,NM_015259	chr21,chr21	+,-	C21orf33,ICOSLG	-43186,63975
chr14:50235622-50236374	chr14	+	50235675	50236276	True	NM_001197331,NM_014315	chr14,chr14	-,+	POLE2,KLHDC2	-80577,-939
chr10:114133193-114134876	chr10	+	114133292	114134613	True	NM_016234,NR_028134,NM_203380,NM_203379	chr10,chr10,chr10,chr10	+,-,+,+	ACSL5,GUCY2GP,ACSL5,ACSL5	1342,-16939,409,-140
chr18:63433300-63433720	chr18	+	63433461	63433735	True	NM_021153,NM_004361	chr18,chr18	-,+	CDH19,CDH7	837531,-15363
chr2:233320861-233321072	chr2	+	233320928	233321120	True	NM_001631,NM_004826	chr2,chr2	+,-	ALPI,ECEL1	-146,31462
chr22:37499522-37499974	chr22	+	37499531	37499933	True	NM_024681,NM_153609	chr22,chr22	+,-	KCTD17,TMPRSS6	-51803,-24
chr1:171453115-171454580	chr1	+	171453400	171454478	True	NM_000261,NM_015172	chr1,chr1	-,+	MYOC,PRRC2C	167351,187
chr9:72659511-72660547	chr9	+	72659558	72660435	True	NM_153267,NM_001099666	chr9,chr9	+,-	MAMDC2,PTAR1	-1112,-284682
chr1:34631530-34632086	chr1	+	34631529	34632135	True	NM_052896,NM_032884	chr1,chr1	-,+	CSMD2,C1orf94	-86,488
chr20:43740464-43740935	chr20	+	43740520	43740885	True	NM_145652,NM_002638	chr20,chr20	-,+	WFDC5,PI3	2969,62654
chr16:1844181-1844751	chr16	+	1844203	1844757	True	NM_001146006,NR_027389,NM_012225,NM_004970	chr16,chr16,chr16,chr16	-,-,+,-	IGFALS,IGFALS,NUBP2,IGFALS	-469,202,-11321,-469
chr6:101319130-101319564	chr6	+	101319258	101319362	True	NM_022091,NM_001166247,NM_006828	chr6,chr6,chr6	-,+,-	ASCC3,GRIK2,ASCC3	9920,527498,9920
chr12:58164609-58165300	chr12	+	58164626	58165261	True	NM_206914,NM_023033,NM_005371,NM_015433,NM_000785	chr12,chr12,chr12,chr12,chr12	+,-,-,+,-	METTL21B,METTL1,METTL1,METTL21B,CYP27B1	1121,703,703,1121,-3650
chr15:90789359-90789942	chr15	+	90789523	90789736	True	NM_001029964,NM_006384	chr15,chr15	+,-	TTLL13,CIB1	3027,-12244
chr2:11671903-11672386	chr2	+	11672284	11672382	True	NR_003095,NM_148903,NM_014668	chr2,chr2,chr2	-,+,+	E2F6,GREB1,GREB1	-65987,7697,1859
chr12:32664789-32665100	chr12	+	32664790	32665098	True	NM_001040436,NM_139241	chr12,chr12	-,+	YARS2,FGD4	243839,-9812
chr9:139582671-139583158	chr9	+	139582722	139583132	True	NR_029695,NM_006412,NM_001012727	chr9,chr9,chr9	+,-,-	MIR126,AGPAT2,AGPAT2	-17719,-811,-811
chr7:27206448-27206868	chr7	+	27206451	27206900	True	NM_152739,NR_029911,NR_002795,NM_018951	chr7,chr7,chr7,chr7	-,-,+,-	HOXA9,MIR196B,HOXA11-AS1,HOXA10	-1302,2332,18126,7105
chr2:242256023-242257166	chr2	+	242256115	242257196	True	NM_005336,NM_006155,NM_001008491,NM_001008492,NM_004404	chr2,chr2,chr2,chr2,chr2	-,+,+,+,+	HDLBP,SEPT2,SEPT2,SEPT2,SEPT2	-861,-1443,-1443,-885,-885
chr8:81767567-81768399	chr8	+	81767811	81768205	True	NM_001033723,NM_023929	chr8,chr8	-,+	ZNF704,ZBTB10	18861,-369415
chr12:49689471-49689878	chr12	+	49689477	49689887	True	NM_001008223,NM_006262	chr12,chr12	-,+	C1QL4,PRPH	41134,-619
chr7:130927177-130928127	chr7	+	130927387	130928144	True	NR_015431,NM_013255	chr7,chr7	-,+	FLJ43663,MKLN1	-133825,84450
chr2:130750383-130750822	chr7	+	39873324	39873606	False	NM_138701,NR_026999	chr7,chr7	-,+	C7orf11,NCRNA00265	300927,-100440
chr2:130750383-130750822	chr22	+	16404949	16404999	False	NM_001005239,NR_001591	chr22,chr22	-,+	OR11H1,psiTPTE22	44855,677801
chr2:130750383-130750822	chr2	+	130750448	130750750	True	NR_036537,NM_032144	chr2,chr2	-,+	LOC100131320,RAB6C	-12403,-13264
chr2:130750383-130750822	chr2	-	132110607	132110825	False	NM_001077637,NR_036499	chr2,chr2	-,+	LOC150786,LOC389043	10956,49648
chr2:130750383-130750822	chr14	-	19422398	19422448	False	NM_001145442,NM_001013354	chr14,chr14	-,+	POTEM,OR11H12	597874,-44855
chr2:130750383-130750822	chr14	+	20137230	20137280	False	NM_001197287,NM_172194	chr14,chr14	-,+	OR11H2,OR4Q3	45261,78306
chrX:48753289-48754559	chrX	+	48753929	48754484	True	NM_001032384,NM_001032381,NM_005834,NM_001032383,NM_001032382,NM_005710,NM_001167947,NM_001167989,NM_001167990,NM_144495,NM_001167992	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	+,+,-,+,+,+,-,+,+,+,+	PQBP1,PQBP1,TIMM17B,PQBP1,PQBP1,PQBP1,TIMM17B,PQBP1,PQBP1,PQBP1,PQBP1	1054,710,993,710,710,1054,993,710,728,710,1290
chr13:23490363-23492156	chr13	+	23490425	23492201	True	NM_000231,NR_033774	chr13,chr13	+,-	SGCG,BASP1P1	262858,-18105
chr13:23490363-23492156	chr13	+	24903799	24903856	False	NM_178540,NM_006437	chr13,chr13	+,-	C1QTNF9,PARP4	-20141,183149
chr16:55519740-55520963	chr16	+	55519992	55520995	True	NM_001127891,NM_001025194,NM_004530	chr16,chr16,chr16	+,-,+	MMP2,CES1,MMP2	-4577,346130,-6970
chrX:130953574-130954837	chrX	+	130953573	130954852	True	NM_001042453,NR_026975	chrX,chrX	+,-	MST4,LOC286467	202392,9878
chr5:179500465-179500911	chr5	+	179500560	179500860	True	NM_003900,NM_018434	chr5,chr5	+,-	SQSTM1,RNF130	-252774,-1451
chr5:157172428-157174379	chr5	+	157172499	157174233	True	NM_173491,NM_178424	chr5,chr5	+,-	LSM11,SOX30	-1808,-93071
chr16:22826444-22827478	chr16	+	22826445	22827509	True	NR_037517,NM_006043	chr16,chr16	-,+	MIR548AA2,HS3ST2	-23082,-636
chr11:909830-910399	chr11	+	910163	910431	True	NM_012305,NM_001142675,NM_001142674,NM_001142677,NM_001142676,NM_023947	chr11,chr11,chr11,chr11,chr11,chr11	+,-,-,-,-,-	AP2A2,CHID1,CHID1,CHID1,CHID1,CHID1	15409,4677,493,493,493,493
chr10:99910710-99911918	chr10	+	99910778	99911670	True	NM_014472,NM_032211	chr10,chr10	+,-	C10orf28,LOXL4	-16452,116397
chr22:39416094-39416595	chr22	+	39416100	39416538	True	NM_152426,NM_175709,NM_014508	chr22,chr22,chr22	+,-,+	APOBEC3D,CBX7,APOBEC3C	579,132050,-5887
chr17:16284958-16285246	chr17	+	16284983	16285069	True	NM_018955,NM_181716	chr17,chr17	+,-	UBB,CENPV	-667,-28171
chr7:5631963-5632191	chr7	+	5631992	5632164	True	NM_001101,NM_003088	chr7,chr7	-,+	ACTB,FSCN1	-61760,289
chr17:30440184-30440669	chr17	+	30440267	30440581	True	NM_001033566,NR_002222	chr17,chr17	+,-	RHOT1,ARGFXP2	28891,38071
chr13:100631586-100631891	chr13	+	100631589	100631867	True	NM_033132,NM_007129	chr13,chr13	-,+	ZIC5,ZIC2	-7411,2158
chr5:176074168-176074395	chr5	+	176074167	176074443	True	NM_003085,NM_130465,NM_012171,NM_001006616	chr5,chr5,chr5,chr5	-,+,+,+	SNCB,TSPAN17,TSPAN17,TSPAN17	-16610,0,0,0
chr19:6773072-6773477	chr19	+	6773094	6773276	True	NM_005490,NM_005428	chr19,chr19	-,+	SH2D3A,VAV1	-5571,-423
chrX:137793636-137793864	chrX	+	137793695	137793809	True	NM_004114,NR_028597	chrX,chrX	-,+	FGF13,SRD5A1P1	68,735168
chr11:66726309-66726864	chr11	+	66726315	66726891	True	NM_000920,NM_001136485,NM_001040716	chr11,chr11,chr11	-,+,-	PC,C11orf86,PC	-468,15862,-468
chr19:15198438-15200287	chr19	+	15198513	15200257	True	NM_001004713,NM_006844	chr19,chr19	+,-	OR1I1,ILVBL	-687,36370
chr22:32547343-32547613	chr22	+	32547347	32547561	True	NM_001010859,NR_033411	chr22,chr22	-,+	C22orf42,SLC5A1	7732,-92241
chr22:32547343-32547613	chr22	-	29804632	29804682	False	NM_145730,NM_021026	chr22,chr22	-,+	AP1B1,RFPL1	-20060,29889
chr5:96338460-96339828	chr5	+	96338492	96339842	True	NM_153234,NM_175920	chr5,chr5	-,+	LIX1,LNPEP	138729,-44401
chr16:1923266-1923889	chr16	+	1923417	1923867	True	NM_152764,NM_001163560,NM_001142398	chr16,chr16,chr16	-,-,+	C16orf73,C16orf73,FAHD1	-1315,-1238,-46254
chr10:43570913-43571167	chr10	+	43570934	43571112	True	NM_020975,NM_020630,NM_145313	chr10,chr10,chr10	+,+,-	RET,RET,RASGEF1A	1404,1404,191305
chrX:114425137-114425341	chrX	+	114425136	114425308	True	NM_001145346,NM_020871	chrX,chrX	+,-	RBMXL3,LRCH2	-1224,43377
chr1:69398509-69399322	chr1	+	69398520	69399354	True	NM_017779,NM_020794	chr1,chr1	-,+	DEPDC1,LRRC7	-435721,826503
chr15:78730673-78730960	chr15	+	78730689	78730795	True	NM_025234,NM_004136	chr15,chr15	-,+	WDR61,IREB2	-138749,-222
chr15:52388840-52389148	chr15	+	52388922	52388988	True	NM_002748,NM_020396	chr15,chr15	+,-	MAPK6,BCL2L10	-77564,16036
chr11:44926925-44927200	chr11	+	44926965	44927151	True	NR_026681,NM_001076787	chr11,chr11	+,-	LOC221122,TP53I11	68301,45507
chr20:29967761-29969363	chr20	+	29967761	29969338	True	NM_153289,NM_173460,NM_153323,NM_054112	chr20,chr20,chr20,chr20	-,-,-,+	DEFB119,DEFB119,DEFB119,DEFB118	9131,9131,9131,-11397
chr5:139488729-139489017	chr5	+	139488743	139489059	True	NM_005859,NM_013983	chr5,chr5	+,-	PURA,NRG2	4648,-65859
chr21:45553423-45553646	chr21	+	45553473	45553645	True	NM_198155,NM_004649,NM_015259	chr21,chr21,chr21	+,+,-	C21orf33,C21orf33,ICOSLG	-30,-30,107239
chr20:32581674-32582015	chr20	+	32581987	32582052	True	NM_016732,NM_007367,NM_003908	chr20,chr20,chr20	+,+,-	RALY,RALY,EIF2S2	-306,-306,118084
chr12:12894441-12895060	chr12	+	12894447	12895103	True	NM_001130415,NM_006143	chr12,chr12	+,-	APOLD1,GPR19	-15651,-45326
chr14:94393814-94394572	chr14	+	94393950	94394432	True	NM_138344,NR_027004	chr14,chr14	+,-	FAM181A,C14orf86	-8743,-1232
chr1:17046211-17046418	chr1	+	17046285	17046395	True	NR_026567,NR_037446	chr1,chr1	-,+	ESPNP,MIR3675	307,-38586
chr14:64804935-64805252	chr14	+	64805018	64805272	True	NM_005956,NR_033777,NM_001040276	chr14,chr14,chr14	+,-,-	MTHFD1,TEX21P,ESR2	49486,9107,46
chr10:94352447-94352724	chr10	+	94352632	94352724	True	NM_004969,NM_004523	chr10,chr10	-,+	IDE,KIF11	-18780,100
chr11:89222615-89224418	chr11	+	89222929	89223964	True	NM_001143836,NM_153696,NM_016931,NR_026571	chr11,chr11,chr11,chr11	-,+,-,-	NOX4,FOLH1B,NOX4,NOX4	745,168500,745,745
chr12:104348167-104349017	chr12	+	104348430	104348705	True	NM_003211,NM_001135570	chr12,chr12	+,-	TDG,C12orf73	10887,2339
chr21:34851142-34851711	chr21	+	34851216	34851518	True	NM_032195,NM_006134	chr21,chr21	+,-	SON,TMEM50B	63831,813
chr4:49299189-49300358	chr4	+	49299610	49299672	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-311396,-390795
chr4:49299189-49300358	chr4	+	49293458	49293520	False	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-305244,-384643
chr4:49299189-49300358	chr4	+	49305746	49305808	False	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-317532,-396931
chr3:52186305-52187224	chr3	+	52186735	52187271	True	NM_015426,NM_199166,NM_001161580,NM_001161581	chr3,chr3,chr3,chr3	-,+,-,-	POC1A,ALAS1,POC1A,POC1A	1485,44844,1485,1485
chrX:6338736-6340123	chrX	+	6338894	6340142	True	NM_000351,NM_016379	chrX,chrX	+,-	STS,VCX3A	797329,113067
chr2:196934287-196934976	chr2	+	196934303	196934984	True	NM_020342,NM_018897	chr2,chr2	+,-	SLC39A10,DNAH7	-412505,-767
chr19:14246567-14246925	chr19	+	14246608	14246746	True	NR_024282,NM_018154	chr19,chr19	+,-	LOC113230,ASF1B	-62838,744
chr10:98744715-98746506	chr10	+	98744842	98746447	True	NM_003061,NM_015652	chr10,chr10	-,+	SLIT1,C10orf12	199286,-3852
chr10:103877361-103877715	chr10	+	103877362	103877698	True	NM_001113407,NM_015062,NM_003893	chr10,chr10,chr10	-,+,-	LDB1,PPRC1,LDB1	2562,15088,-2639
chr14:57270696-57270971	chr14	+	57270699	57271007	True	NM_021728,NM_172337,NR_029385	chr14,chr14,chr14	-,-,+	OTX2,OTX2,OTX2OS1	6227,1388,8893
chr2:233497426-233497837	chr2	+	233497567	233497825	True	NM_145702,NM_025202	chr2,chr2	-,+	TIGD1,EFHD1	-82341,381
chr6:105843390-105844914	chr6	+	105843521	105844631	True	NR_037157,NM_002726	chr6,chr6	+,-	C6orf112,PREP	-258012,6422
chr16:21720670-21722043	chr16	+	21720860	21722056	True	NM_170664,NM_005849	chr16,chr16	+,-	OTOA,IGSF6	-4630,-56888
chr7:31734802-31735204	chr7	+	31734826	31735246	True	NM_022728,NM_006658,NM_001145123	chr7,chr7,chr7	-,+,+	NEUROD6,C7orf16,C7orf16	-354288,-8253,-8253
chr1:201618025-201618252	chr1	+	201618054	201618236	True	NM_020443,NM_004078	chr1,chr1	+,-	NAV1,CSRP1	-655,-141667
chr4:140221427-140222521	chr4	+	140221428	140222316	True	NM_001184987,NM_001184986,NM_001184990,NM_001184991,NM_001184989,NM_001184988,NM_057175,NM_002494	chr4,chr4,chr4,chr4,chr4,chr4,chr4,chr4	-,-,-,-,-,-,+,-	NDUFC1,NDUFC1,NDUFC1,NDUFC1,NDUFC1,NDUFC1,NAA15,NDUFC1	1447,106,1447,106,1447,1447,359,130
chr20:43539081-43540027	chr20	+	43539130	43539778	True	NM_006809,NM_001124756	chr20,chr20	-,+	TOMM34,PABPC1L	49388,-478
chr12:120908770-120909572	chr12	+	120909211	120909413	True	NM_001037494,NM_003769	chr12,chr12	+,-	DYNLL1,SRSF9	-1612,-1653
chr1:14923073-14924187	chr1	+	14923198	14924115	True	NM_201628,NM_015209,NR_027136	chr1,chr1,chr1	+,+,-	KAZN,KAZN,C1orf126	1097,1097,554896
chr3:48958680-48960445	chr3	+	48959333	48960341	True	NM_006321,NM_001123040	chr3,chr3	+,-	ARIH2,C3orf71	-3110,-2515
chr15:56286972-56287918	chr15	+	56287240	56287936	True	NM_198524,NM_006154	chr15,chr15	+,-	TEX9,NEDD4	369707,-1405
chr19:58220120-58220362	chr19	+	58220124	58220388	True	NM_001085384,NM_138347	chr19,chr19	-,+	ZNF154,ZNF551	241,-26818
chr2:32490063-32490340	chr2	+	32490066	32490196	True	NM_032312,NM_021209,NM_001199138,NM_001199139	chr2,chr2,chr2,chr2	+,-,-,-	YIPF4,NLRC4,NLRC4,NLRC4	12761,676,-117,553
chr10:134353059-134354020	chr10	+	134353231	134354016	True	NM_005539,NM_173575	chr10,chr10	+,-	INPP5A,STK32C	-1929,-231754
chr14:101192033-101192858	chr14	+	101192169	101192889	True	NM_003836,NM_020836	chr14,chr14	+,-	DLK1,BEGAIN	312,-156038
chr7:8473736-8473992	chr7	+	8473754	8473928	True	NM_004968,NM_152745	chr7,chr7	-,+	ICA1,NXPH1	-171569,-220
chr19:8371277-8371605	chr19	+	8371412	8371622	True	NM_001031,NM_016579,NM_001165895	chr19,chr19,chr19	+,-,-	RPS28,CD320,CD320	14761,1668,1668
chr21:17666599-17668471	chr21	+	17666775	17668008	True	NM_003489,NR_027791	chr21,chr21	-,+	NRIP1,C21orf34	-1229649,-100134
chr2:128281285-128282206	chr2	+	128281298	128281897	True	NM_017969,NM_001080527	chr2,chr2	-,+	IWS1,MYO7B	2247,11480
chr6:118000138-118000379	chr6	+	118000210	118000421	True	NM_020399,NM_138459	chr6,chr6	-,+	GOPC,NUS1	-76505,-3654
chr6:149951686-149951893	chr6	+	149951827	149951939	True	NM_138785,NM_001204076	chr6,chr6	+,-	C6orf72,KATNA1	-64351,18051
chr2:215307874-215308434	chr2	+	215308128	215308484	True	NM_000465,NM_001080500	chr2,chr2	-,+	BARD1,VWC2L	365996,-31732
chr5:131133427-131134048	chr5	+	131133426	131133905	True	NM_000588,NM_001008738,NM_133372	chr5,chr5,chr5	+,-,-	IL3,FNIP1,FNIP1	262441,-670,-670
chr5:96079112-96079369	chr5	+	96079313	96079417	True	NR_033798,NM_016442	chr5,chr5	+,-	CAST,ERAP1	-120,64525
chrX:4465843-4466345	chrX	+	4465874	4466384	True	NR_034031,NM_004042	chrX,chrX	-,+	LOC389906,ARSF	-703939,-1481093
chr1:161574984-161575293	chr1	+	161575026	161575338	True	NM_000570,NR_024151	chr1,chr1	-,+	FCGR3B,HSPA7	25870,510
chr7:6656827-6657278	chr7	+	6656863	6657315	True	NM_017560,NM_001145118	chr7,chr7	+,-	ZNF853,GRID2IP	-1387,-65796
chr2:220094610-220094985	chr2	+	220094618	220094948	True	NM_024085,NM_018089,NM_001077198,NM_001042410	chr2,chr2,chr2,chr2	-,+,-,+	ATG9A,ANKZF1,ATG9A,ANKZF1	-257,-190,-257,-59
chr8:100900241-100901772	chr8	+	100900403	100901469	True	NM_004374,NM_005034	chr8,chr8	-,+	COX6C,POLR2K	4823,261369
chr6:52434110-52435217	chr6	+	52434268	52435042	True	NM_012288,NR_024403	chr6,chr6	-,+	TRAM2,LOC730101	6870,94156
chr4:123125881-123127571	chr4	+	123125883	123127586	True	NM_000586,NM_015312	chr4,chr4	-,+	IL2,KIAA1109	250119,-34183
chrX:51808222-51808571	chrX	+	51808421	51808615	True	NM_001098800,NM_177537,NM_177535,NM_030801,NR_003712,NR_003711	chrX,chrX,chrX,chrX,chrX,chrX	-,-,-,-,+,-	MAGED4,MAGED4B,MAGED4B,MAGED4B,SNORA11E,SNORA11D	3714,3803,3803,3803,-2029,-1852
chrX:51808222-51808571	chrX	-	51931671	51931865	False	NM_001098800,NM_177537,NM_177535,NM_030801,NR_003712,NR_003711	chrX,chrX,chrX,chrX,chrX,chrX	+,+,+,+,-,+	MAGED4,MAGED4B,MAGED4B,MAGED4B,SNORA11E,SNORA11D	-3714,-3803,-3803,-3803,2029,1852
chr12:64786944-64788156	chr12	+	64787072	64788137	True	NM_007235,NM_001170633,NM_001099676	chr12,chr12,chr12	+,-,-	XPOT,C12orf56,C12orf56	10015,-2727,-2727
chr5:64860245-64860648	chr5	+	64860468	64860670	True	NM_015342,NM_022145	chr5,chr5	+,-	PPWD1,CENPK	-1390,-1473
chr1:6456205-6456463	chr1	+	6456451	6456516	True	NM_007274,NM_031475	chr1,chr1	-,+	ACOT7,ESPN	-2625,28331
chr15:30919018-30919525	chr15	+	30919044	30919569	True	NM_148911,NM_001039841	chr15,chr15	-,+	CHRFAM7A,ARHGAP11B	-233180,-216
chr15:30919018-30919525	chr15	+	32908471	32908957	False	NM_014783,NM_199357,NR_036650	chr15,chr15,chr15	+,+,-	ARHGAP11A,ARHGAP11A,LOC100288615	-831,-831,-82529
chr1:86886175-86887262	chr1	+	86886177	86887237	True	NM_006536,NM_020729	chr1,chr1	+,-	CLCA2,ODF2L	2531,-24152
chr9:34629918-34630142	chr9	+	34630094	34630166	True	NM_000155,NM_001017363,NM_147157,NM_024348,NM_007234,NM_005866	chr9,chr9,chr9,chr9,chr9,chr9	+,-,-,-,-,-	GALT,ARID3C,SIGMAR1,DCTN3,DCTN3,SIGMAR1	16468,-2083,7652,-9598,-9598,7652
chr6:7585140-7585709	chr6	+	7585216	7585748	True	NM_152551,NM_001170693	chr6,chr6	+,-	SNRNP48,CAGE1	4683,-195274
chr15:45695785-45696724	chr15	+	45695850	45696692	True	NM_001482,NM_024063,NR_027635	chr15,chr15,chr15	-,+,+	GATM,SPATA5L1,SPATA5L1	-24870,-1382,-1382
chr6:150245069-150245622	chr6	+	150245088	150245660	True	NM_025217,NM_001001788	chr6,chr6	+,-	ULBP2,RAET1G	17475,-874
chr12:25104750-25105306	chr12	+	25104801	25105326	True	NM_005504,NM_001204126,NM_001178091,NM_001178092	chr12,chr12,chr12,chr12	-,+,-,-	BCAT1,LRMP,BCAT1,BCAT1	-2408,99854,-2408,-2408
chr21:27098043-27098909	chr21	+	27098170	27098436	True	NM_001003701,NM_002040,NM_001003703,NM_001003697,NM_001003696,NM_001197297,NM_001685	chr21,chr21,chr21,chr21,chr21,chr21,chr21	-,+,-,-,-,+,-	ATP5J,GABPA,ATP5J,ATP5J,ATP5J,GABPA,ATP5J	9579,8892,9579,9579,9579,8821,9579
chr1:36547836-36549195	chr1	+	36547964	36549061	True	NM_017825,NM_005202,NM_014466	chr1,chr1,chr1	+,-,+	ADPRHL2,COL8A2,TEKT2	5391,16839,614
chr8:12048612-12049233	chr8	+	12049075	12049137	True	NM_001083537,NR_003494,NR_027425	chr8,chr8,chr8	-,-,+	FAM86B1,FAM86B1,FAM66D	2537,2537,-75841
chr8:12048612-12049233	chr8	+	12291348	12291410	False	NR_026789,NM_001137610	chr8,chr8	+,-	FAM66A,FAM86B2	-71877,2492
chr19:39138168-39138501	chr19	+	39138369	39138513	True	NM_004924,NM_007181	chr19,chr19	+,-	ACTN4,MAP4K1	-153,-29726
chr3:156533089-156533847	chr3	+	156533250	156533793	True	NM_001004316,NR_003284	chr3,chr3	+,-	LEKR1,PA2G4P4	10302,-3440
chr7:99515606-99515910	chr7	+	99515681	99515850	True	NM_033091,NM_033017,NR_036679	chr7,chr7,chr7	-,-,+	TRIM4,TRIM4,AZGP1P1	1434,1434,62534
chr1:24967331-24967734	chr1	+	24967486	24967548	True	NM_005839,NM_001199012	chr1,chr1	+,-	SRRM1,C1orf201	2045,-225899
chr6:39071970-39072782	chr6	+	39072016	39072660	True	NM_018322,NM_002062	chr6,chr6	-,+	C6orf64,GLP1R	10255,-55510
chr2:3642772-3643597	chr2	+	3642935	3643617	True	NM_199235,NM_002936,NM_024027	chr2,chr2,chr2	+,-,+	COLEC11,RNASEH1,COLEC11	-352,-36995,-352
chr4:56260952-56261906	chr4	+	56261081	56261787	True	NM_018475,NR_037969	chr4,chr4	+,-	TMEM165,LOC100506462	302,-9334
chr6:56819459-56819689	chr6	+	56819464	56819648	True	NM_152731,NM_183227	chr6,chr6	+,-	BEND6,RAB23	124,266659
chr13:32432379-32433366	chr13	+	32432379	32433363	True	NR_027062,NM_001136571	chr13,chr13	+,-	EEF1DP3,ZAR1L	-11510,452778
chrX:73524056-73524258	chrX	+	73524077	73524307	True	NM_203303,NR_028379	chrX,chrX	+,-	ZCCHC13,MIR374AHG	-103,-10668
chr1:170114479-170115256	chr1	+	170114543	170115234	True	NR_036065,NR_036064,NM_001136107	chr1,chr1,chr1	+,-,+	MIR3119-2,MIR3119-1,METTL11B	5284,5428,-47
chr11:9685978-9686308	chr11	+	9686005	9686233	True	NR_033972,NM_015055	chr11,chr11	-,+	LOC440028,SWAP70	94897,-428
chr17:34257657-34258865	chr17	+	34257685	34258864	True	NM_001163124,NM_001163125,NM_001034836,NM_001163120,NM_001163121,NM_001163122,NM_001163130,NM_020426,NM_145654,NM_003487,NR_027999,NR_027998,NR_027997,NR_027996,NR_028000	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,-,-,-,-,+,-,-,-,-,-	RDM1,RDM1,RDM1,RDM1,RDM1,RDM1,RDM1,LYZL6,RDM1,TAF15,RDM1,RDM1,RDM1,RDM1,RDM1	-382,-382,95,95,95,-382,-382,7747,95,-121248,-382,95,95,95,-382
chr19:52674387-52674771	chr19	+	52674422	52674756	True	NM_001102657,NM_014225	chr19,chr19	-,+	ZNF836,PPP2R1A	190,18298
chr2:23622909-23624169	chr2	+	23623212	23624210	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	525774,-14965
chr3:185657212-185658491	chr3	+	185657456	185658190	True	NM_004593,NR_033752	chr3,chr3	-,+	TRA2B,LOC344887	-1532,28076
chr12:107075839-107076418	chr12	+	107075931	107076466	True	NM_001033050,NM_032491	chr12,chr12	-,+	MTERFD3,RFX4	304520,2019
chr18:21165249-21165473	chr18	+	21165276	21165522	True	NM_013326,NM_000271	chr18,chr18	+,-	C18orf8,NPC1	-81865,1109
chr6:131942101-131943950	chr6	+	131942682	131943968	True	NM_015979,NM_004830,NM_005021	chr6,chr6,chr6	-,-,+	MED23,MED23,ENPP3	5446,5446,14473
chr1:45670622-45670894	chr1	+	45670683	45670900	True	NM_020883,NR_024270	chr1,chr1	-,+	ZSWIM5,LOC400752	1400,98681
chr16:71523512-71524133	chr16	+	71523526	71524103	True	NM_005769,NM_006961	chr16,chr16	+,-	CHST4,ZNF19	35919,-272
chr4:48908939-48909333	chr4	+	48908955	48909185	True	NM_001014446,NM_152398,NM_001168254	chr4,chr4,chr4	-,-,+	OCIAD2,OCIAD2,OCIAD1	-140,-140,-75683
chr4:10668514-10669768	chr4	+	10668680	10669646	True	NR_030298,NM_052964	chr4,chr4	+,-	MIR572,CLNK	700804,16790
chr1:236273634-236274264	chr1	+	236273810	236274298	True	NM_002508,NM_003272	chr1,chr1	-,+	NID1,GPR137B	-45329,31533
chr2:20645651-20646001	chr2	+	20645964	20646031	True	NM_015317,NM_004040	chr2,chr2	-,+	PUM2,RHOB	-118820,803
chr19:8072353-8073242	chr19	+	8072561	8072973	True	NM_001419,NM_001201359	chr19,chr19	-,+	ELAVL1,CCL25	-2032,44672
chr2:34109532-34110561	chr2	+	34109580	34110228	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-370696,-156296
chr1:174968501-174968836	chr1	+	174968540	174968836	True	NM_014412,NM_022100,NM_001007214	chr1,chr1,chr1	+,-,+	CACYBP,MRPS14,CACYBP	55,23805,-20
chrX:24332337-24333282	chrX	+	24332361	24333205	True	NM_001136233,NM_001136234	chrX,chrX	-,+	FAM48B2,FAM48B1	-929,47672
chr10:104155766-104156533	chr10	+	104155817	104156511	True	NM_001077493,NM_002502,NM_002779,NM_001077494	chr10,chr10,chr10,chr10	+,+,-,+	NFKB2,NFKB2,PSD,NFKB2	-1639,-436,22440,-1529
chr9:26949103-26950164	chr9	+	26949315	26949888	True	NM_001099224,NM_001031689,NM_025103,NM_001099223,NM_001099222	chr9,chr9,chr9,chr9,chr9	+,-,+,+,+	IFT74,PLAA,IFT74,IFT74,IFT74	6482,-1847,6482,-2329,-2056
chr8:17023396-17024972	chr8	+	17023614	17024621	True	NM_013354,NM_016353	chr8,chr8	-,+	CNOT7,ZDHHC2	79823,-9829
chr20:25604136-25604399	chr20	+	25604150	25604388	True	NM_021067,NM_152667	chr20,chr20	+,-	GINS1,NANP	-215878,310
chr10:92681595-92681985	chr10	+	92681742	92682013	True	NM_001104546,NM_014391	chr10,chr10	+,-	RPP30,ANKRD1	-50084,-710
chr3:41999458-42000778	chr3	+	41999549	42000426	True	NM_001042646,NM_017886	chr3,chr3	+,-	TRAK1,ULK4	132319,3292
chr7:124405306-124405603	chr7	+	124405317	124405617	True	NM_005302,NM_001174046	chr7,chr7	-,+	GPR37,SPAM1	114,-839460
chr22:44964231-44965497	chr22	+	44964710	44965458	True	NR_028409,NM_032287,NR_028411,NR_028410	chr22,chr22,chr22,chr22	+,-,+,+	NCRNA00207,LDOC1L,NCRNA00207,NCRNA00207	21,-70705,21,21
chr7:45612910-45613285	chr7	+	45613041	45613223	True	NM_021116,NR_024271	chr7,chr7	+,-	ADCY1,SEPT7P2	901,195444
chr2:6072917-6073924	chr2	+	6072921	6073757	True	NM_207315,NR_026832	chr2,chr2	-,+	CMPK2,LOC150622	932230,-153
chr5:169813684-169814301	chr5	+	169813734	169814335	True	NM_004137,NM_001034838	chr5,chr5	-,+	KCNMB1,KCNIP1	2353,-32904
chr19:36131556-36132625	chr19	+	36131657	36132665	True	NM_000704,NM_001863,NM_014209	chr19,chr19,chr19	-,+,+	ATP4A,COX6B1,ETV2	-77097,6459,-19
chr15:21071794-21072658	chr15	+	21071905	21072157	True	NM_207355,NR_027411	chr15,chr15	-,+	POTEB,GOLGA8C	6,-304282
chr15:21071794-21072658	chr15	+	22083065	22083318	False	NR_015416,NM_207355	chr15,chr15	+,-	LOC727924,POTEB	194713,6
chr3:42128869-42129789	chr3	+	42129081	42129706	True	NM_001042646,NM_017886	chr3,chr3	+,-	TRAK1,ULK4	3039,-125421
chrX:154114209-154114468	chrX	+	154114252	154114312	True	NR_036049,NM_001007524,NM_080720,NM_012151,NM_001007523,NR_036260,NM_019863,NR_036259,NM_001017990	chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX,chrX	-,+,+,+,+,-,-,-,+	MIR1184-1,F8A3,H2AFB3,F8A1,F8A2,MIR1184-3,F8,MIR1184-2,H2AFB1	1471,337,-986,322,337,1471,315,1471,-986
chr1:59616903-59617256	chr1	+	59616959	59617271	True	NR_027120,NM_001113411	chr1,chr1	-,+	LOC729467,FGGY	-4480,145353
chr3:158520295-158520535	chr3	+	158520369	158520485	True	NM_002888,NM_001167903,NM_022736	chr3,chr3,chr3	-,+,+	RARRES1,MFSD1,MFSD1	-70094,-705,-705
chr10:69579013-69580700	chr10	+	69579595	69580124	True	NM_021800,NM_012238	chr10,chr10	-,+	DNAJC12,SIRT1	17876,64302
chr4:108853532-108853775	chr4	+	108853547	108853819	True	NM_005443,NM_183075	chr4,chr4	-,+	PAPSS1,CYP2U1	-212128,-881
chr4:148605544-148606561	chr4	+	148605607	148606352	True	NM_024605,NM_138364	chr4,chr4	+,-	ARHGAP10,PRMT10	47100,-327
chr4:57629252-57630035	chr4	+	57629309	57629676	True	NM_021114,NM_005612	chr4,chr4	-,+	SPINK2,REST	58268,144365
chr9:139873494-139873740	chr9	+	139873573	139873711	True	NM_000954,NM_004669,NM_207510	chr9,chr9,chr9	+,-,+	PTGDS,CLIC3,LCNL1	-1668,17363,3733
chr1:2344100-2344446	chr1	+	2344233	2344495	True	NM_002617,NM_007033,NM_153818	chr1,chr1,chr1	-,+,-	PEX10,RER1,PEX10	-223,-21070,-223
chr3:186079106-186079643	chr3	+	186079149	186079451	True	NM_016306,NM_001080744,NM_001080745,NM_001346	chr3,chr3,chr3,chr3	+,-,-,-	DNAJB11,DGKG,DGKG,DGKG	209015,622,622,622
chr19:55269273-55270368	chr19	+	55269456	55270300	True	NM_014218,NM_001127255	chr19,chr19	+,-	KIR2DL1,NLRP7	10964,188623
chr10:134900387-134901008	chr10	+	134900421	134901050	True	NM_173572,NM_001083909	chr10,chr10	-,+	C10orf93,GPR123	-144332,358
chr19:58967276-58967723	chr19	+	58967383	58967731	True	NM_207395,NM_003433	chr19,chr19	+,-	ZNF324B,ZNF132	-4463,-15794
chr19:58967276-58967723	chr19	+	58982931	58983043	False	NM_017908,NM_003433,NM_014347	chr19,chr19,chr19	+,-,+	ZNF446,ZNF132,ZNF324	4751,-31342,-4570
chr6:13488527-13489050	chr6	+	13488544	13489058	True	NM_033069,NM_018988,NM_031244	chr6,chr6,chr6	-,-,+	C6orf114,GFOD1,SIRT5	-2129,-757,85733
chrX:26576511-26576972	chr13	-	84480998	84481048	True	NM_015567,NM_052910	chr13,chr13	+,-	SLITRK5,SLITRK1	3843821,-24470
chr1:28994477-28995179	chr1	+	28994652	28995156	True	NM_024482,NM_005644,NM_006582	chr1,chr1,chr1	+,-,+	GMEB1,TAF12,GMEB1	83,-25048,83
chr21:46058106-46058394	chr21	+	46058334	46058394	True	NM_198698,NM_181688,NM_198692	chr21,chr21,chr21	-,+,+	KRTAP12-4,KRTAP10-10,KRTAP10-11	16232,-1112,7936
chr5:72857446-72858000	chr5	+	72857675	72857834	True	NM_023039,NM_032175	chr5,chr5	-,+	ANKRA2,UTP15	3738,3763
chrX:40133293-40134628	chrX	+	40133993	40134654	True	NM_001123384,NM_005765	chrX,chrX	-,+	BCOR,ATP6AP2	-97411,305561
chr17:4643384-4643819	chr17	+	4643505	4643809	True	NM_001100812,NM_001001683,NM_032265,NM_022059,NM_001136046	chr17,chr17,chr17,chr17,chr17	-,+,+,-,+	CXCL16,MED11,ZMYND15,CXCL16,ZMYND15	-282,-8839,-225,-282,-243
chr12:8184457-8184966	chr12	+	8184599	8184977	True	NM_004054,NM_018416	chr12,chr12	-,+	C3AR1,FOXJ2	34028,381
chr17:45268995-45269869	chr17	+	45269146	45269394	True	NM_001114091,NM_001002841,NM_001256	chr17,chr17,chr17	-,+,-	CDC27,MYL4,CDC27	-2481,17033,-2481
chr1:4055090-4055616	chr1	+	4055242	4055506	True	NR_024455,NM_207356	chr1,chr1	+,-	LOC100133612,C1orf174	-238325,-238385
chr11:12695203-12695413	chr11	+	12695229	12695455	True	NM_021961,NM_013253	chr11,chr11	+,-	TEAD1,DKK3	513,-664312
chr14:55695600-55697152	chr22	+	21976041	21976091	True	NM_152612,NM_001017964	chr22,chr22	+,-	CCDC116,YDJC	10994,8299
chr8:4851828-4852034	chr8	+	4851837	4852059	True	NM_033225,NM_001172574	chr8,chr8	-,+	CSMD1,MCPH1	319,1412053
chr10:54074398-54074615	chr10	+	54074472	54074646	True	NM_012242,NM_000242	chr10,chr10	+,-	DKK1,MBL2	-482,456864
chr19:1490427-1490692	chr19	+	1490573	1490729	True	NM_138393,NM_017573	chr19,chr19	+,-	REEP6,PCSK4	435,-166
chr19:55689216-55689659	chr19	+	55689219	55689677	True	NM_017729,NM_003180	chr19,chr19	+,-	EPS8L1,SYT5	-97518,2093
chr2:65663900-65664933	chr2	+	65663965	65664973	True	NM_181784,NM_005722	chr2,chr2	-,+	SPRED2,ACTR2	-4309,-209187
chr16:1303905-1304114	chr16	+	1303958	1304018	True	NM_024164,NM_012217	chr16,chr16	-,+	TPSB2,TPSD1	-23773,2254
chr16:1303905-1304114	chr16	-	1282400	1282460	False	NM_012467,NM_024164,NM_003294	chr16,chr16,chr16	-,-,+	TPSG1,TPSB2,TPSAB1	-7146,-2215,8217
chr12:3860820-3862108	chr12	+	3860906	3862116	True	NM_001144958,NM_001144959,NM_032680,NM_019854	chr12,chr12,chr12,chr12	-,-,-,+	EFCAB4B,EFCAB4B,EFCAB4B,PRMT8	300,300,300,-260532
chr18:9107986-9108779	chr18	+	9108022	9108570	True	NM_001042388,NM_021074	chr18,chr18	-,+	PPP4R1,NDUFV2	506094,-5455
chr3:50538078-50539700	chr3	+	50538113	50539526	True	NM_006030,NM_016173,NM_001005505,NM_001174051	chr3,chr3,chr3,chr3	-,+,-,-	CACNA2D2,HEMK1,CACNA2D2,CACNA2D2	1416,67382,1416,1416
chr1:85742913-85744101	chr1	+	85742915	85743775	True	NM_003921,NM_145172	chr1,chr1	-,+	BCL10,WDR63	-328,-214983
chr17:11945608-11946218	chr17	+	11945607	11946087	True	NM_144680,NM_003010	chr17,chr17	-,+	ZNF18,MAP2K4	-44918,-21529
chr8:54163893-54164120	chr8	+	54163961	54164089	True	NM_000912,NM_005285	chr8,chr8	-,+	OPRK1,NPBWR1	155,-311544
chr17:7486798-7487477	chr17	+	7486970	7487528	True	NR_002918,NM_004870,NM_001040059,NR_002912,NR_024603,NM_006942,NM_001251,NR_002604	chr17,chr17,chr17,chr17,chr17,chr17,chr17,chr17	+,+,+,+,+,-,+,+	SNORA48,MPDU1,CD68,SNORA67,MPDU1,SOX15,CD68,SNORD10	-8990,-56,-4215,-5748,-56,6012,-4216,-6892
chr20:45524196-45524712	chr20	+	45524246	45524761	True	NM_005244,NM_172110,NM_033550	chr20,chr20,chr20	+,+,-	EYA2,EYA2,TP53RK	-1035,-1035,-205970
chr2:98705536-98706004	chr2	+	98705620	98705943	True	NM_015348,NM_144992	chr2,chr2	-,+	TMEM131,VWA3B	-93266,-2089
chr12:10317883-10318529	chr12	+	10318146	10318538	True	NM_153022,NM_001172632,NM_001172633,NM_002543	chr12,chr12,chr12,chr12	+,-,-,-	C12orf59,OLR1,OLR1,OLR1	13018,6302,6302,6302
chr1:161367142-161367612	chr1	+	161367424	161367503	True	NM_001013625,NM_003001	chr1,chr1	-,+	C1orf192,SDHC	-29760,-83314
chr10:75936230-75936465	chr10	+	75936295	75936391	True	NM_001123,NM_001202449,NM_207012	chr10,chr10,chr10	+,+,-	ADK,ADK,AP3M1	-99,-99,-25469
chr17:7328953-7329850	chr17	+	7329006	7329822	True	NM_152766,NM_199339,NM_175734,NM_178518	chr17,chr17,chr17,chr17	-,+,+,+	C17orf61,SPEM1,C17orf74,TMEM102	-21556,-5380,-124,8939
chr1:65615279-65616470	chr1	+	65615395	65616481	True	NM_203464,NM_001005353,NM_013410,NR_029516	chr1,chr1,chr1,chr1	+,+,+,-	AK4,AK4,AK4,MIR101-1	-2218,-1937,-1600,-91204
chr3:32723154-32724374	chr3	+	32723460	32724205	True	NM_016141,NM_015442	chr3,chr3	-,+	DYNC1LI1,CNOT10	-111094,2492
chr3:51997992-51998385	chr3	+	51997998	51998390	True	NM_033008,NM_033010,NM_080865,NM_001174100,NM_020418	chr3,chr3,chr3,chr3,chr3	-,-,+,-,-	PCBP4,PCBP4,GPR62,PCBP4,PCBP4	3142,-1090,-8719,3142,3110
chr5:114961109-114961394	chr5	+	114961108	114961384	True	NM_181836,NM_001284,NM_001164468,NM_001164469	chr5,chr5,chr5,chr5	-,+,-,-	TMED7,AP3S1,TMED7-TICAM2,TMED7-TICAM2	542,216234,542,542
chr7:26194262-26195978	chr7	+	26194657	26195954	True	NM_002137,NM_004289	chr7,chr7	-,+	HNRNPA2B1,NFE2L3	44516,-2861
chr6:117080763-117081047	chr6	+	117080875	117081033	True	NM_001085480,NM_002269	chr6,chr6	-,+	FAM162B,KPNA5	5903,-78559
chrX:52110324-52111928	chrX	+	52110361	52111806	True	NR_033251,NM_130777,NM_001079538	chrX,chrX,chrX	-,+,+	XAGE1C,XAGE2,XAGE2B	148398,271,1351
chrX:52110324-52111928	chrX	-	52387367	52388812	False	NM_130777,NM_001097592,NM_001079538	chrX,chrX,chrX	-,+,-	XAGE2,XAGE1A,XAGE2B	-271,122948,-1351
chrX:15673268-15673583	chrX	+	15673362	15673580	True	NM_020665,NR_026551	chrX,chrX	-,+	TMEM27,CA5BP1	9624,19458
chr17:3818899-3819128	chr17	+	3818933	3819147	True	NM_002558,NM_031965	chr17,chr17	-,+	P2RX1,GSG2	863,-191787
chr12:6486667-6487058	chr12	+	6486717	6487103	True	NM_001159576,NM_002342,NM_001159575,NM_001038	chr12,chr12,chr12,chr12	-,+,-,-	SCNN1A,LTBR,SCNN1A,SCNN1A	-2327,6253,-194,-1812
chr16:88221581-88222417	chr16	+	88221673	88222293	True	NM_001173543,NM_001739	chr16,chr16	+,-	BANP,CA5A	-218100,-251561
chr16:88221581-88222417	chr16	+	29233677	29233901	False	NR_002939,NM_001031827	chr16,chr16	+,-	RUNDC2C,BOLA2	68639,232434
chr5:43041158-43041618	chr5	+	43041159	43041652	True	NM_001014279,NR_015447	chr5,chr5	-,+	C5orf39,LOC153684	-712,583
chr18:57367509-57368613	chr18	+	57367728	57368511	True	NM_133459,NM_021127	chr18,chr18	-,+	CCBE1,PMAIP1	-3084,198680
chr6:24120233-24121685	chr6	+	24120558	24121708	True	NM_016356,NM_080723	chr6,chr6	-,+	DCDC2,NRSN1	236622,4705
chr2:135675354-135675825	chr2	+	135675382	135675873	True	NM_058241,NM_001241,NR_037649,NR_036549	chr2,chr2,chr2,chr2	+,+,+,-	CCNT2,CCNT2,CCNT2,LOC100129961	518,518,518,353
chr1:11317001-11317308	chr1	+	11317030	11317308	True	NM_004958,NM_013319	chr1,chr1	-,+	MTOR,UBIAD1	5350,15946
chr6:84417700-84417931	chr6	+	84417704	84417884	True	NR_026669,NM_014841,NM_001009994	chr6,chr6,chr6	-,-,+	SNAP91,SNAP91,RIPPLY2	1293,1293,145100
chr6:25725917-25726665	chr6	+	25726136	25726686	True	NM_170745,NM_170610	chr6,chr6	-,+	HIST1H2AA,HIST1H2BA	154,450
chr14:20438833-20439150	chr14	+	20438892	20439062	True	NM_001004712,NM_001005486	chr14,chr14	-,+	OR4K14,OR4K15	44346,4615
chr2:679213-679733	chr2	+	679213	679537	True	NM_018968,NM_152834	chr2,chr2	+,-	SNTG2,TMEM18	267016,-1774
chr15:50647428-50647638	chr15	+	50647438	50647644	True	NR_026891,NR_024490,NM_181427,NM_016655,NM_005254,NM_002041,NM_016654	chr15,chr15,chr15,chr15,chr15,chr15,chr15	-,+,-,-,-,-,-	FLJ10038,LOC100129387,GABPB1,GABPB1,GABPB1,GABPB1,GABPB1	-362,-1118,11,11,11,11,11
chr9:80613722-80614206	chr9	+	80614046	80614240	True	NM_001098802,NM_002072	chr9,chr9	+,-	CEP78,GNAQ	236750,32029
chr17:19015445-19015673	chr17	+	19015639	19015717	True	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	15064,-65303
chr17:19015445-19015673	chr17	-	18965456	18965534	False	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	65247,-15120
chr16:83933299-83934179	chr16	+	83933370	83933914	True	NM_001080442,NM_012213	chr16,chr16	-,+	SLC38A8,MLYCD	141912,-691
chr12:132851965-132852390	chr12	+	132852057	132852355	True	NM_001122636,NR_024563	chr12,chr12	-,+	GALNT9,LOC100130238	53600,-131
chr1:207990248-207990650	chr1	+	207990293	207990689	True	NR_029518,NR_026817	chr1,chr1	-,+	MIR29B2,LOC148696	-14425,1034
chr10:74918416-74919966	chr10	+	74918933	74919742	True	NM_173348,NR_024203,NM_007265,NM_001135752,NM_001135753	chr10,chr10,chr10,chr10,chr10	+,-,-,-,-	FAM149B1,ECD,ECD,ECD,ECD	8134,8163,8163,8163,8163
chr1:201125668-201126512	chr1	+	201125672	201126418	True	NM_001164586,NM_016456	chr1,chr1	+,-	IGFN1,TMEM9	33534,-2040
chr10:79793351-79793561	chr10	+	79793378	79793466	True	NM_001026,NM_007055,NM_001142282,NM_001142283,NM_001142284,NM_033022,NM_001142285	chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,-,+,+,+,+,+	RPS24,POLR3A,RPS24,RPS24,RPS24,RPS24,RPS24	51,-4080,51,51,51,51,51
chr8:41165361-41165857	chr8	+	41165541	41165838	True	NM_001174124,NM_003012	chr8,chr8	+,-	GOLGA7,SFRP1	182242,1203
chr10:127463394-127463779	chr10	+	127463412	127463798	True	NM_147191,NM_078468	chr10,chr10	-,+	MMP21,BCCIP	642,48305
chr21:34918183-34918941	chr21	+	34918206	34918709	True	NM_175085,NM_138927,NM_000819,NM_001136005,NM_032195,NM_001136006	chr21,chr21,chr21,chr21,chr21,chr21	-,+,-,-,+,-	GART,SON,GART,GART,SON,GART	-3742,-2910,-3742,-3011,-2910,-3008
chr11:126045141-126045611	chr11	+	126045147	126045539	True	NM_001144827,NM_024556	chr11,chr11	-,+	RPUSD4,FAM118B	36098,36079
chr10:96590333-96591990	chr10	+	96590783	96591925	True	NM_000770,NM_000769	chr10,chr10	-,+	CYP2C8,CYP2C19	237387,-68378
chr18:73121829-73122595	chr18	+	73121946	73122584	True	NM_005786,NM_001037331	chr18,chr18	+,-	TSHZ1,C18orf62	-199266,17055
chr11:119291570-119292116	chr11	+	119291572	119292133	True	NM_006288,NR_034160	chr11,chr11	-,+	THY1,LOC100499227	2163,-39135
chr3:122330276-122330652	chr3	+	122330474	122330552	True	NM_031458,NM_152615	chr3,chr3	-,+	PARP9,PARP15	-46951,3972
chr22:28199492-28199894	chr22	+	28199580	28199874	True	NM_002430,NR_026962	chr22,chr22	-,+	MN1,TTC28-AS1	-2094,115489
chr12:124194760-124195780	chr12	+	124194800	124195762	True	NM_012463,NM_001414	chr12,chr12	+,-	ATP6V0A2,EIF2B1	1102,-76477
chr22:25351913-25352517	chr22	+	25352031	25352511	True	NM_001145206,NM_001001663	chr22,chr22	+,-	KIAA1671,TMEM211	71429,-16717
chr19:11924272-11924962	chr19	+	11924379	11924915	True	NM_152357,NM_001080493	chr19,chr19	+,-	ZNF440,ZNF823	191,-74619
chr1:22891373-22891823	chr1	+	22891471	22891723	True	NM_020526,NR_036214,NM_001006943	chr1,chr1,chr1	+,-,+	EPHA8,MIR4253,EPHA8	-1518,298046,-1518
chr20:2844298-2845357	chr20	+	2844597	2845399	True	NM_002836,NM_022760,NM_080840	chr20,chr20,chr20	+,-,+	PTPRA,FAM113A,PTPRA	125,-23265,8742
chr1:52602551-52603481	chr1	+	52602965	52603223	True	NM_015913,NM_007324,NM_007323,NM_004799	chr1,chr1,chr1,chr1	-,+,+,+	TXNDC12,ZFYVE9,ZFYVE9,ZFYVE9	-81918,4822,4822,4822
chr19:45583267-45584444	chr19	+	45583304	45584168	True	NM_145288,NM_001007269,NM_024707,NM_001007270	chr19,chr19,chr19,chr19	-,+,+,+	ZNF296,GEMIN7,GEMIN7,GEMIN7	-3616,-826,-826,-838
chr19:47352764-47353870	chr19	+	47352772	47353766	True	NM_021575,NM_004069,NM_004491	chr19,chr19,chr19	-,-,+	AP2S1,AP2S1,GRLF1	487,487,68166
chr3:184452907-184453190	chr3	+	184452911	184453101	True	NM_001009921,NM_022149	chr3,chr3	+,-	VPS8,MAGEF1	76829,-23075
chr7:107526970-107528400	chr7	+	107527167	107528176	True	NM_000111,NM_000108	chr7,chr7	-,+	SLC26A3,DLD	-83489,3409
chr1:224305028-224306994	chr1	+	224305312	224306727	True	NM_001136115,NR_031574,NM_015176	chr1,chr1,chr1	+,-,+	FBXO28,MIR320B2,FBXO28	-3572,138166,-3572
chr16:83986051-83986939	chr16	+	83986213	83986738	True	NM_013370,NM_001080442,NM_182981,NM_182980	chr16,chr16,chr16,chr16	+,-,+,+	OSGIN1,SLC38A8,OSGIN1,OSGIN1	-3592,89074,88,-3592
chr17:28704099-28704883	chr17	+	28704098	28704911	True	NM_206832,NM_001199775,NM_001304	chr17,chr17,chr17	-,+,+	TMIGD1,CPD,CPD	-43033,2584,1030
chr19:47817541-47817745	chr19	+	47817577	47817645	True	NM_001736,NM_001127242	chr19,chr19	+,-	C5AR1,BBC3	-4524,-81554
chr14:90723299-90724027	chr14	+	90723417	90723932	True	NM_017970,NM_002802	chr14,chr14	-,+	C14orf102,PSMC1	74398,-574
chr15:43802363-43802580	chr15	+	43802413	43802595	True	NM_002373,NM_005657	chr15,chr15	+,-	MAP1A,TP53BP1	7210,162
chr4:15710221-15711636	chr4	+	15710658	15711362	True	NM_004334,NR_036464	chr4,chr4	+,-	BST1,FBXL5	-6148,-53623
chr12:56208455-56209327	chr12	+	56208697	56209229	True	NR_026723,NR_026722,NM_033082,NM_014182	chr12,chr12,chr12,chr12	-,-,-,+	SARNP,SARNP,SARNP,ORMDL2	2373,2373,2373,2576
chr19:53290140-53290750	chr19	+	53290152	53290450	True	NM_198457,NR_023311	chr19,chr19	-,+	ZNF600,ZNF137P	-118,-190266
chrX:31270634-31272564	chrX	+	31270706	31272382	True	NM_203391,NM_004015	chrX,chrX	+,-	GK,DMD	-599294,12704
chr19:6890608-6892030	chr19	+	6890659	6892051	True	NR_024075,NM_001974	chr19,chr19	-,+	EMR4P,EMR1	98856,-3128
chr19:55873698-55873960	chr19	+	55873697	55874007	True	NM_000641,NM_144613,NM_001145402,NM_139172	chr19,chr19,chr19,chr19	-,-,-,+	IL11,COX6B2,FAM71E2,TMEM190	7857,-7515,663,14196
chr10:96724759-96725739	chr10	+	96724956	96725178	True	NM_000771,NM_000770	chr10,chr10	+,-	CYP2C9,CYP2C8	-26592,104126
chr16:31128160-31128412	chr16	+	31128340	31128414	True	NM_002773,NM_001122957,NM_032188,NM_182958,NM_005881	chr16,chr16,chr16,chr16,chr16	-,+,+,+,+	PRSS8,BCKDK,MYST1,MYST1,BCKDK	18787,-8729,570,570,-8729
chr2:169885551-169886289	chr2	+	169885595	169886227	True	NM_005771,NM_003742	chr2,chr2	+,-	DHRS9,ABCB11	35071,1665
chr1:109392314-109394058	chr1	+	109392352	109394078	True	NM_152763,NR_034168	chr1,chr1	-,+	AKNAD1,LOC642864	5688,5760
chr2:98150441-98152382	chr2	+	98151009	98151778	True	NM_025190,NM_001862	chr2,chr2	-,+	ANKRD36B,COX5B	54709,110742
chr2:98150441-98152382	chr2	-	89089561	89089611	False	NM_004836,NR_015424	chr2,chr2	-,+	EIF2AK3,ANKRD36BP2	-162467,-24193
chr2:98150441-98152382	chr2	-	97886280	97886344	False	NM_199336,NM_001164315	chr2,chr2	-,+	FAHD2B,ANKRD36	-125698,-107098
chr6:150286490-150287151	chr6	+	150286551	150287173	True	NR_024045,NM_025218	chr6,chr6	-,+	RAET1K,ULBP1	39157,-1459
chr1:116926387-116927460	chr1	+	116926390	116927478	True	NM_001160234,NM_001160233,NR_024126	chr1,chr1,chr1	+,+,-	ATP1A1,ATP1A1,ATP1A1OS	-463,-9966,33760
chr3:49759154-49759460	chr3	+	49759183	49759507	True	NM_013334,NM_198722,NM_021971,NM_022064	chr3,chr3,chr3,chr3	-,-,-,+	GMPPB,AMIGO3,GMPPB,RNF123	1927,-1945,1927,-32244
chr18:23722162-23723037	chr18	+	23722440	23723048	True	NM_001025097,NM_001025096,NM_005637,NM_144662	chr18,chr18,chr18,chr18	+,+,-,+	PSMA8,PSMA8,SS18,PSMA8	-8683,-8683,-51829,-8683
chr10:104597130-104597357	chr10	+	104597139	104597401	True	NM_000102,NM_001136200	chr10,chr10	-,+	CYP17A1,C10orf32	-61,16565
chr17:30667885-30668918	chr17	+	30668097	30668777	True	NM_001098507,NM_001032293,NR_030362,NM_022344,NM_003457	chr17,chr17,chr17,chr17,chr17	+,+,+,-,+	ZNF207,ZNF207,MIR632,C17orf75,ZNF207	8379,8379,8350,462,8379
chr5:137879235-137879475	chr5	+	137879265	137879429	True	NM_004730,NM_001964	chr5,chr5	-,+	ETF1,EGR1	-333,-78135
chr16:90014543-90014762	chr16	+	90014583	90014657	True	NM_207514,NM_017702,NM_145039	chr16,chr16,chr16	+,+,-	DEF8,DEF8,CENPBD1	525,493,24633
chr2:68959049-68959567	chr2	+	68959076	68959548	True	NM_001007231,NM_001166277,NM_014482	chr2,chr2,chr2	+,+,-	ARHGAP25,ARHGAP25,BMP10	2364,2364,139151
chr11:28129981-28131970	chr11	+	28130098	28131843	True	NM_031217,NM_152636,NM_001113528	chr11,chr11,chr11	-,+,+	KIF18A,METTL15,METTL15	-352,-351,-351
chr14:23940874-23941559	chr14	+	23941029	23941123	True	NM_000257,NM_001042635,NM_015514	chr14,chr14,chr14	-,+,+	MYH7,NGDN,NGDN	-36159,-2198,-2198
chr6:11769891-11770780	chr6	+	11770051	11770773	True	NM_001143948,NM_032744,NM_001100829	chr6,chr6,chr6	-,-,+	C6orf105,C6orf105,TMEM170B	8557,8557,-231598
chr20:48804252-48805277	chr20	+	48804460	48805218	True	NR_027889,NM_005194	chr20,chr20	-,+	TMEM189,CEBPB	-34125,2157
chr19:7701712-7702004	chr19	+	7701718	7701862	True	NM_006949,NR_033242,NM_020196,NM_174895,NM_001127396,NM_001171155	chr19,chr19,chr19,chr19,chr19,chr19	+,+,-,-,+,+	STXBP2,LOC100131801,XAB2,PCP2,STXBP2,LOC100131801	128,-7098,-7279,-3148,128,-7098
chrX:106960965-106961539	chrX	+	106961064	106961579	True	NM_001015881,NM_002764,NM_004089	chrX,chrX,chrX	-,+,-	TSC22D3,PRPS1,TSC22D3	-1353,-89462,-773
chr21:37536683-37537829	chr21	+	37536735	37537803	True	NM_017438,NM_005128	chr21,chr21	-,+	SETD4,DOPEY2	-103919,53
chr3:50544011-50544645	chr3	+	50544028	50544482	True	NM_006030,NM_016173,NM_001005505,NM_001174051	chr3,chr3,chr3,chr3	-,+,-,-	CACNA2D2,HEMK1,CACNA2D2,CACNA2D2	-3136,62426,-3136,-3136
chr17:4270094-4270407	chr17	+	4270164	4270456	True	NM_003342,NM_182538	chr17,chr17	-,+	UBE2G1,SPNS3	-195,66762
chr12:56031457-56031925	chr12	+	56031473	56031861	True	NM_001144996,NM_206899	chr12,chr12	-,+	ITGA7,OR10P1	69875,-848
chr12:112545407-112546035	chr12	+	112545450	112545904	True	NM_001143906,NM_024953	chr12,chr12	+,-	TRAFD1,NAA25	17444,781
chr1:154177653-154178271	chr1	+	154177682	154178112	True	NM_001010979,NM_001127320	chr1,chr1	-,+	C1orf189,UBAP2L	747,14542
chr20:2796242-2796940	chr20	+	2796263	2796745	True	NM_001167670,NM_080739,NM_019609	chr20,chr20,chr20	+,+,-	LOC100288797,C20orf141,CPXM1	230,-657,-14971
chr6:118971686-118971944	chr6	+	118971686	118971878	True	NM_001042475,NM_206921,NM_002667	chr6,chr6,chr6	-,-,+	C6orf204,C6orf204,PLN	1192,1192,-102295
chr16:1542466-1542772	chr16	+	1542478	1542770	True	NM_001013658,NM_016111	chr16,chr16	-,+	PTX4,TELO2	-4010,581
chr17:38171695-38172134	chr17	+	38171754	38172094	True	NM_001079518,NM_000759,NR_033662,NM_172220,NM_172219,NM_001178147	chr17,chr17,chr17,chr17,chr17,chr17	-,+,+,+,+,+	MED24,CSF3,CSF3,CSF3,CSF3,CSF3	38845,-191,-191,-191,-191,-191
chr9:114938748-114938982	chr9	+	114938865	114939021	True	NM_022486,NM_001195822	chr9,chr9	-,+	SUSD1,HSDL2	-1309,203167
chr20:36148992-36149310	chr20	+	36149045	36149339	True	NM_005386,NM_001167821,NM_001167820,NM_001167823,NM_001167822,NM_006698,NM_181689	chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,-,-,-,-,-,+	NNAT,BLCAP,BLCAP,BLCAP,BLCAP,BLCAP,NNAT	267,6845,7044,3664,6794,7044,267
chr20:23125750-23127193	chr20	+	23125989	23127127	True	NR_034149,NM_001052	chr20,chr20	-,+	LOC200261,SSTR4	-12716,-109983
chr16:8960172-8960375	chr16	+	8960177	8960321	True	NM_014316,NM_001042476,NM_000303	chr16,chr16,chr16	-,-,+	CARHSP1,CARHSP1,PMM2	2592,1977,-68558
chr1:23493002-23493772	chr1	+	23493166	23493790	True	NM_033631,NM_001142546,NR_036057	chr1,chr1,chr1	-,-,+	LUZP1,LUZP1,MIR3115	1611,1611,-122425
chr3:75690412-75690690	chr3	+	75690415	75690672	True	NM_001128223,NR_031714	chr3,chr3	-,+	ZNF717,MIR1324	143634,-10552
chr1:38516820-38517240	chr1	+	38516826	38517288	True	NM_002699,NR_037432	chr1,chr1	-,+	POU3F1,MIR3659	-4376,37614
chr12:93397169-93398243	chr12	+	93397275	93397943	True	NM_001004330,NM_003566	chr12,chr12	+,-	PLEKHG7,EEA1	-267069,-74168
chr20:2792927-2793655	chr20	+	2792932	2793428	True	NM_001167670,NM_080739,NM_019609	chr20,chr20,chr20	+,+,-	LOC100288797,C20orf141,CPXM1	3547,2228,-11640
chrX:47699263-47700065	chrX	+	47699438	47699830	True	NM_007137,NM_001007088	chrX,chrX	+,-	ZNF81,ZNF182	-3200,163599
chr17:79995723-79996027	chr17	+	79995782	79996002	True	NM_016286,NM_005052,NM_001195218	chr17,chr17,chr17	-,+,-	DCXR,RAC3,DCXR	-209,-6301,-209
chr12:58176775-58177422	chr12	+	58176790	58177293	True	NM_023033,NM_001172697,NM_001172695,NM_001172696,NM_005726	chr12,chr12,chr12,chr12,chr12	-,+,+,+,+	METTL1,TSFM,TSFM,TSFM,TSFM	-10876,-313,-313,-313,-313
chr19:19497577-19498011	chr19	+	19497589	19497741	True	NM_172231,NM_017660	chr19,chr19	-,+	SUGP1,GATAD2A	-66282,-998
chr14:64683276-64684394	chr14	+	64683275	64684431	True	NM_182910,NM_182913,NM_001040275	chr14,chr14,chr14	+,+,-	SYNE2,SYNE2,ESR2	-654,-2467,76747
chr1:3369343-3369798	chr1	+	3369406	3369706	True	NR_030277,NM_014448	chr1,chr1	-,+	MIR551A,ARHGEF16	107698,1440
chr18:43679050-43679786	chr18	+	43679074	43679829	True	NR_026978,NM_138443,NM_004046,NM_001001937	chr18,chr18,chr18,chr18	+,+,-,-	HAUS1,HAUS1,ATP5A1,ATP5A1	4468,4468,-787,4420
chr1:212779793-212780154	chr1	+	212779825	212780161	True	NM_001674,NM_018664,NM_001040619	chr1,chr1,chr1	+,-,+	ATF3,BATF3,ATF3	1832,93216,1832
chr5:138269-139145	chr5	+	138385	138998	True	NM_052909,NM_145265	chr5,chr5	+,-	PLEKHG4B,CCDC127	1374,79364
chr9:100953520-100954157	chr9	+	100953821	100954127	True	NM_018946,NM_052820	chr9,chr9	+,-	NANS,CORO2A	-134913,879
chr19:34285861-34286352	chr19	+	34285939	34286238	True	NM_001129995,NM_001129994,NM_001166057,NM_024076	chr19,chr19,chr19,chr19	+,+,-,+	KCTD15,KCTD15,PEPD,KCTD15	1512,1512,-273140,1512
chr19:19303115-19303447	chr19	+	19303239	19303481	True	NM_001145784,NM_005919,NM_003721,NM_001145783,NM_134440,NR_027307,NR_027308	chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,+,-,+,-,-	LOC729991,LOC729991-MEF2B,RFXANK,LOC729991,RFXANK,LOC729991-MEF2B,LOC729991-MEF2B	-31,-31,-282,-31,-282,-31,-31
chr12:12765964-12767222	chr12	+	12766096	12767270	True	NM_001310,NM_030640	chr12,chr12	+,-	CREBL2,DUSP16	-1320,-50648
chr8:16048523-16049570	chr8	+	16048675	16049525	True	NM_002445,NM_138716,NM_138715,NM_178234	chr8,chr8,chr8,chr8	-,-,-,+	MSR1,MSR1,MSR1,TUSC3	835,835,835,-651135
chr8:143858278-143858579	chr8	+	143858299	143858371	True	NM_177477,NM_177476,NM_177457,NM_177458,NM_003695,NM_016647,NM_023946	chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,-,+,-	LYNX1,LYNX1,LYNX1,LYNX1,LY6D,C8orf55,LYNX1	423,116,1319,-7053,9687,-49729,1318
chr2:121553987-121554815	chr2	+	121554284	121554802	True	NR_027181,NM_005270	chr2,chr2	-,+	LOC84931,GLI2	-330359,64
chr22:43548554-43549396	chr22	+	43548684	43549006	True	NM_007311,NM_014507,NM_173467,NM_000714	chr22,chr22,chr22,chr22	+,-,-,+	TSPO,MCAT,MCAT,TSPO	-1200,-9281,-9281,-1200
chr7:151333075-151334425	chr7	+	151333508	151334472	True	NR_034013,NM_024429	chr7,chr7	+,-	LOC100131176,PRKAG2	-227237,-4164
chr1:44400866-44401220	chr1	+	44400877	44401173	True	NM_057090,NM_001136215,NM_006934,NM_057091	chr1,chr1,chr1,chr1	+,+,-,+	ARTN,ARTN,SLC6A9,ARTN	-1936,-1936,81874,-1936
chr12:52942034-52942799	chr12	+	52942056	52942794	True	NM_033448,NM_002284	chr12,chr12	-,+	KRT71,KRT86	4187,-246458
chr20:33759385-33759606	chr20	+	33759451	33759587	True	NM_006404,NR_026728	chr20,chr20	+,-	PROCR,EDEM2	186,-24290
chr17:46184577-46184817	chr17	+	46184585	46184799	True	NM_001127228,NM_152244,NM_006807,NM_013323	chr17,chr17,chr17,chr17	-,+,-,+	CBX1,SNX11,CBX1,SNX11	-5702,120,-6025,147
chr1:155025299-155026250	chr1	+	155025502	155026251	True	NM_144622,NM_207191,NM_207196,NM_207197,NM_207194,NM_207195,NM_003815,NM_182690,NM_005227,NM_182689	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,+,+,+,+,+,+,+,+,+	DCST2,ADAM15,ADAM15,ADAM15,ADAM15,ADAM15,ADAM15,EFNA4,EFNA4,EFNA4	-19245,-1791,-1791,-1791,-1791,-1791,-1791,9961,9961,9961
chr7:105161060-105162142	chr7	+	105161498	105162143	True	NM_021930,NM_019042	chr7,chr7	+,-	RINT1,PUS7	10388,592
chr4:138452461-138453546	chr4	+	138452650	138453538	True	NM_012118,NM_019035	chr4,chr4	+,-	CCRN4L,PCDH18	1483404,141
chr8:144779838-144780718	chr8	+	144779994	144780712	True	NR_015445,NM_001162914	chr8,chr8	+,-	BREA2,LOC100130274	-760,9617
chr3:122047903-122049798	chr3	+	122048554	122049830	True	NM_005213,NM_001017928	chr3,chr3	+,-	CSTA,CCDC58	-4602,52306
chr5:135854839-135855739	chr5	+	135854909	135855785	True	NM_020389,NM_001001419	chr5,chr5	-,+	TRPC7,SMAD5	-153745,-386424
chr8:22462968-22463189	chr8	+	22463008	22463194	True	NM_001013842,NM_173686,NR_027715,NM_021174,NR_033902,NM_001198827	chr8,chr8,chr8,chr8,chr8,chr8	+,+,-,+,+,+	C8orf58,C8orf58,FLJ14107,KIAA1967,KIAA1967,C8orf58	-5945,-5945,36578,-520,-914,-5945
chr5:178204149-178204367	chr5	+	178204274	178204418	True	NR_024035,NM_058230	chr5,chr5	-,+	AACSP1,ZNF354B	-997,82535
chr9:112892298-112893853	chr9	+	112892677	112893870	True	NM_001136562,NM_001012993	chr9,chr9	+,-	AKAP2,C9orf152	-4954,76594
chr2:102087474-102088857	chr2	+	102087841	102088906	True	NM_017546,NM_001145664	chr2,chr2	+,-	C2orf29,RFX8	-218547,2309
chr7:88397936-88399552	chr7	+	88398109	88399602	True	NM_152706,NM_181646	chr7,chr7	-,+	C7orf62,ZNF804B	25488,-9418
chr18:14963558-14965291	chr18	+	14963741	14965307	True	NR_027417,NR_036153	chr18,chr18	-,+	LOC644669,MIR3156-2	360661,-133627
chr5:133749455-133751096	chr5	+	133749682	133750863	True	NM_003337,NM_080656	chr5,chr5	+,-	UBE2B,CDKN2AIPNL	-42863,-2084
chr2:23648315-23649253	chr2	+	23648357	23649181	True	NM_017552,NM_052920	chr2,chr2	-,+	ATAD2B,KLHL29	500803,-40110
chr15:89787162-89787563	chr15	+	89787186	89787604	True	NM_001113378,NM_000326,NM_018193	chr15,chr15,chr15	+,-,+	FANCI,RLBP1,FANCI	-43,-22264,-43
chr15:25282259-25283020	chr15	+	25282269	25283064	True	NM_130838,NR_001295,NR_001289	chr15,chr15,chr15	-,+,+	UBE3A,SNORD109A,SNORD109B	367646,4056,4056
chr12:123235606-123236428	chr12	+	123235615	123236261	True	NM_032554,NM_003677	chr12,chr12	-,+	GPR81,DENR	-20486,1109
chr10:124711062-124712684	chr10	+	124711671	124712348	True	NM_153336,NM_024942	chr10,chr10	+,-	PSTK,C10orf88	27207,1622
chr19:42746845-42747127	chr19	+	42746869	42747175	True	NM_019884,NM_133444	chr19,chr19	-,+	GSK3A,ZNF526	-133,-22428
chr22:23849264-23850247	chr22	+	23849333	23850061	True	NM_153615,NM_020070	chr22,chr22	+,-	RGL4,IGLL1	182986,72484
chr19:19887835-19889356	chr19	+	19887900	19889405	True	NM_021047,NR_026956	chr19,chr19	+,-	ZNF253,LOC284440	87308,-678
chr10:97778829-97779214	chr10	+	97778998	97779164	True	NR_036113,NM_001159747	chr10,chr10	-,+	MIR3157,CC2D2B	45042,-19208
chr1:203439157-203440124	chr1	+	203439193	203439884	True	NM_002023,NM_201348,NM_002725	chr1,chr1,chr1	-,+,+	FMOD,PRELP,PRELP	-118904,4998,4998
chr16:88923349-88923615	chr16	+	88923493	88923659	True	NM_001080487,NM_000512,NM_016209	chr16,chr16,chr16	-,-,+	PABPN1L,GALNS,TRAPPC2L	9459,-119,-38
chr2:97307221-97308176	chr2	+	97307565	97308007	True	NM_017991,NM_001113382,NM_001115016	chr2,chr2,chr2	-,+,-	KIAA1310,FER1L5,KIAA1310	-3450,566,-3450
chr9:140124290-140124743	chr9	+	140124423	140124791	True	NM_001190228,NM_080877,NM_001177316,NM_001177317,NM_031297,NM_199001	chr9,chr9,chr9,chr9,chr9,chr9	+,+,+,+,-,+	LOC643596,SLC34A3,SLC34A3,SLC34A3,RNF208,C9orf169	-2456,593,417,417,-8648,-4830
chr5:172411149-172411567	chr5	+	172411318	172411614	True	NR_026682,NM_003945	chr5,chr5	-,+	LOC100268168,ATP6V0E1	-24947,-606
chr11:5675014-5676140	chr11	+	5675556	5676145	True	NM_033034,NR_002777	chr11,chr11	-,+	TRIM5,TRIM78P	30251,-11195
chr8:134070300-134070915	chr8	+	134070303	134070873	True	NM_006748,NM_001204869	chr8,chr8	-,+	SLA,WISP1	1780,132408
chrX:100353181-100354271	chrX	+	100353221	100353979	True	NM_006733,NM_024917	chrX,chrX	+,-	CENPI,TRMT2B	818,-46116
chr5:172385428-172385639	chr5	+	172385427	172385571	True	NM_016093,NR_026682,NR_026683	chr5,chr5,chr5	+,-,-	RPL26L1,LOC100268168,LOC100268168	867,850,257
chr2:88425858-88427522	chr2	+	88425907	88427499	True	NM_018271,NM_001443	chr2,chr2	+,-	THNSL2,FABP1	42335,201
chr6:24486056-24488050	chr6	+	24486296	24488085	True	NM_170740,NM_001503,NM_001080,NM_177483	chr6,chr6,chr6,chr6	+,-,+,-	ALDH5A1,GPLD1,ALDH5A1,GPLD1	7111,1815,7111,1764
chr7:37488622-37488879	chr7	+	37488790	37488908	True	NM_181791,NM_014800	chr7,chr7	+,-	GPR141,ELMO1	291087,-279
chr12:96343919-96344543	chr12	+	96343933	96344575	True	NM_152435,NM_182496	chr12,chr12	+,-	AMDHD1,CCDC38	-6913,-7505
chr1:31769185-31769474	chr1	+	31769189	31769493	True	NM_016505,NM_004814	chr1,chr1	+,-	ZCCHC17,SNRNP40	348,201
chr17:1647506-1648500	chr17	+	1647807	1648231	True	NM_001165921,NM_001165920,NM_000934,NR_028505	chr17,chr17,chr17,chr17	+,+,+,-	SERPINF2,SERPINF2,SERPINF2,C17orf91	-1728,-1538,-1728,-28241
chr1:12890770-12892612	chr1	+	12891305	12892164	True	NM_023014,NM_001146344	chr1,chr1	+,-	PRAMEF2,PRAMEF11	24776,-41
chr4:671720-672061	chr4	+	671875	672075	True	NM_007100,NM_002477,NR_033743	chr4,chr4,chr4	-,+,-	ATP5I,MYL5,ATP5I	-3748,-215,-3748
chr20:61201897-61202182	chr20	+	61201906	61202146	True	NR_033263,NR_029676	chr20,chr20	-,+	C20orf200,MIR133A2	-53138,-39838
chr2:112251464-112252232	chr2	+	112251488	112252267	True	NR_024373,NM_207003,NR_015395	chr2,chr2,chr2	-,+,-	LOC541471,BCL2L11,LOC541471	475,-373061,475
chr2:112251464-112252232	chr2	-	87755358	87756136	False	NM_001078170,NR_024206,NR_024204,NR_024205	chr2,chr2,chr2,chr2	-,+,+,+	RGPD2,NCRNA00152,NCRNA00152,NCRNA00152	369213,-435,-435,-435
chr1:117308063-117309407	chr1	+	117308208	117309152	True	NM_001767,NM_001542	chr1,chr1	+,-	CD2,IGSF3	-11173,-97894
chr4:49621778-49623005	chr4	+	49621793	49622306	True	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-633586,-712978
chr4:49621778-49623005	chr4	-	49178609	49178659	False	NM_025087,NM_152398	chr4,chr4	+,-	CWH43,OCIAD2	-190395,-269794
chr9:42857349-42858341	chr9	+	42857904	42858316	True	NR_026759,NR_026558	chr9,chr9	-,+	FAM95B1,AQP7P3	175046,-19
chr9:42857349-42858341	chr9	+	67031109	67031305	False	NR_024443,NR_024496	chr9,chr9	-,+	LOC100133920,LOC442421	-127,-536891
chr1:192123874-192125546	chr1	+	192123883	192125388	True	NM_130782,NM_001199261	chr1,chr1	+,-	RGS18,UCHL5	2203,903185
chr6:64351826-64353017	chr6	+	64352066	64352913	True	NM_015153,NM_016571	chr6,chr6	+,-	PHF3,LGSN	3517,-322184
chr1:231113427-231113826	chr1	+	231113480	231113832	True	NM_001122835,NM_022786,NM_024525	chr1,chr1,chr1	-,+,-	TTC13,ARV1,TTC13	836,990,836
chr4:16228859-16229099	chr4	+	16228892	16229130	True	NM_153365,NR_027696,NR_027697	chr4,chr4,chr4	-,+,+	TAPT1,FLJ39653,FLJ39653	-731,-657,-657
chr16:89573257-89573471	chr16	+	89573291	89573519	True	NM_199367,NM_003119,NM_013275	chr16,chr16,chr16	+,+,-	SPG7,SPG7,ANKRD11	1285,1285,-16322
chr2:200821139-200822037	chr2	+	200821463	200821844	True	NM_001039693,NM_024520,NR_004862	chr2,chr2,chr2	-,+,-	C2orf60,C2orf47,C2orf60	-1004,-1474,-1004
chr6:88985631-88986259	chr6	+	88985848	88986140	True	NM_030960,NM_016083	chr6,chr6	+,-	SPACA1,CNR1	-228392,-110081
chr4:122721719-122722563	chr4	+	122721752	122722554	True	NM_005033,NM_001237,NM_001034194	chr4,chr4,chr4	+,-,+	EXOSC9,CCNA2,EXOSC9	-23,22584,-23
chr21:43768097-43769846	chr21	+	43768118	43769476	True	NM_005423,NM_001001895	chr21,chr21	-,+	TFF2,UBASH3A	1782,54542
chr10:112323621-112324176	chr10	+	112323754	112324163	True	NM_005871,NM_005445	chr10,chr10	-,+	SMNDC1,SMC3	-259047,3285
chr17:6940047-6940390	chr17	+	6940138	6940390	True	NM_153357,NM_201566	chr17,chr17	-,+	SLC16A11,SLC16A13	6910,-795
chrX:139048380-139049636	chrX	+	139048556	139049586	True	NM_001013403,NM_000133	chrX,chrX	-,+	CXorf66,F9	-879,-435716
chr5:138719652-138720154	chr5	+	138719697	138720073	True	NM_001033112,NM_016459,NM_005847,NM_152685	chr5,chr5,chr5,chr5	+,-,-,-	PAIP2,MZB1,SLC23A1,SLC23A1	-41616,5582,-658,-658
chr16:68058159-68059026	chr16	+	68058289	68059074	True	NM_017803,NM_018380	chr16,chr16	+,-	DUS2L,DDX28	-1136,-519
chrX:70476379-70476723	chrX	+	70476472	70476750	True	NM_001171163,NM_001171162,NM_001145408,NM_201599,NM_005096	chrX,chrX,chrX,chrX,chrX	-,-,+,-,-	ZMYM3,ZMYM3,NONO,ZMYM3,ZMYM3	-1973,-1425,26291,-2434,-1973
chr2:98152382-98154360	chr2	+	98152993	98154102	True	NM_025190,NM_001862	chr2,chr2	-,+	ANKRD36B,COX5B	52379,108418
chr2:98152382-98154360	chr2	-	97884691	97884748	False	NM_199336,NM_001164315	chr2,chr2	-,+	FAHD2B,ANKRD36	-124109,-105516
chr5:140431481-140432173	chr5	+	140431544	140432198	True	NM_013340,NM_031947	chr5,chr5	+,-	PCDHB1,SLC25A2	-616,251464
chr20:3023678-3025255	chr20	+	3023743	3025063	True	NM_001501,NM_178331,NM_000490,NM_178332,NM_030811	chr20,chr20,chr20,chr20,chr20	+,+,-,+,+	GNRH2,GNRH2,AVP,GNRH2,MRPS26	76,76,40357,76,1611
chr19:55772668-55773299	chr19	+	55772843	55773331	True	NM_032430,NM_014931	chr19,chr19	+,-	BRSK1,PPP6R1	22202,-2805
chr3:137717378-137717898	chr3	+	137717460	137717790	True	NM_001002026,NM_001170538	chr3,chr3	+,-	CLDN18,DZIP1L	-27,114582
chr10:31651579-31651921	chr10	+	31651799	31651859	True	NM_001174094,NR_024284	chr10,chr10	+,-	ZEB1,LOC220930	-41794,-43775
chr17:34308197-34308565	chr17	+	34308364	34308582	True	NM_004590,NM_032963,NM_032962,NM_002988	chr17,chr17,chr17,chr17	-,-,-,+	CCL16,CCL14,CCL14,CCL18	-9,5232,5232,83060
chr10:99493507-99495159	chr10	+	99493866	99495185	True	NM_001002261,NM_001002262,NM_001174119,NM_001174120,NM_001174121,NM_001174122,NM_144588,NR_026754	chr10,chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,+,+,-	ZFYVE27,ZFYVE27,ZFYVE27,ZFYVE27,ZFYVE27,ZFYVE27,ZFYVE27,LOC100270710	3048,1692,1692,1692,1692,1692,1692,-15964
chr2:88927229-88927452	chr2	+	88927228	88927500	True	NM_144563,NM_004836	chr2,chr2	+,-	RPIA,EIF2AK3	63675,-134
chr21:46003019-46003342	chr21	+	46003147	46003389	True	NM_198694,NM_198688,NM_198687	chr21,chr21,chr21	-,-,+	KRTAP10-5,KRTAP10-6,KRTAP10-4	-2666,9047,-9592
chr1:90285073-90286267	chr1	+	90285184	90286224	True	NM_018103,NM_001134479,NR_002830	chr1,chr1,chr1	+,+,-	LRRC8D,LRRC8D,GEMIN8P4	1255,348,174351
chr5:128429048-128429331	chr5	+	128429060	128429350	True	NM_016048,NM_001999	chr5,chr5	+,-	ISOC1,FBN2	1091,-555325
chr9:37420610-37421812	chr9	+	37420865	37421739	True	NM_012203,NM_014872	chr9,chr9	+,-	GRHPR,ZBTB5	967,43730
chr4:154073508-154074143	chr4	+	154073672	154074046	True	NM_001130067,NR_001562	chr4,chr4	+,-	TRIM2,ANXA2P1	223,155967
chr5:113697404-113697720	chr5	+	113697598	113697742	True	NM_018700,NM_021614	chr5,chr5	-,+	TRIM36,KCNN2	818551,273
chr12:55047012-55048993	chr12	+	55047129	55048794	True	NM_053283,NM_001165975	chr12,chr12	-,+	DCD,PDE1B	-4980,-92081
chr3:137832636-137833354	chr3	+	137832786	137833334	True	NM_014154,NM_173543,NM_001170538	chr3,chr3,chr3	+,-,-	ARMC8,DZIP1L,DZIP1L	72813,1167,-464
chr10:17659511-17660189	chr10	+	17659516	17660036	True	NM_003473,NM_014241	chr10,chr10	+,-	STAM,PTPLA	26087,-143
chr17:4544323-4544748	chr17	+	4544433	4544731	True	NM_001140,NM_001114974	chr17,chr17	-,+	ALOX15,SMTNL2	279,-56654
chr4:26323244-26323448	chr4	+	26323381	26323445	True	NM_203284,NM_015874,NM_203283,NM_005349,NM_000730	chr4,chr4,chr4,chr4,chr4	+,+,+,+,-	RBPJ,RBPJ,RBPJ,RBPJ,CCKAR	-984,-984,-2100,-2100,168647
chr2:99955635-99956124	chr2	+	99955863	99956176	True	NM_015904,NM_005783	chr2,chr2	+,-	EIF5B,TXNDC9	-2090,-3003
chr19:10695110-10696669	chr19	+	10695451	10696540	True	NM_001145056,NM_005498	chr19,chr19	+,-	SLC44A2,AP1M2	16580,1508
chr6:25282265-25284244	chr6	+	25282558	25283797	True	NM_017640,NM_001173977,NR_027626	chr6,chr6,chr6	+,+,-	LRRC16A,LRRC16A,CMAH	-2953,-2953,-143938
chrX:129535242-129535879	chrX	+	129535306	129535698	True	NM_016024,NM_178471	chrX,chrX	+,-	RBMX2,GPR119	244,-15795
chr10:133916568-133916782	chr10	+	133916596	133916688	True	NM_001105521,NM_004052	chr10,chr10	+,-	JAKMIP3,BNIP3	1624,-121161
chr8:57025796-57026074	chr8	+	57025845	57026123	True	NM_005372,NM_001011667	chr8,chr8	-,+	MOS,CHCHD7	468,98191
chr16:69345052-69345317	chr16	+	69345212	69345354	True	NM_022341,NM_013245	chr16,chr16	-,+	PDF,VPS4A	19194,0
chr8:122158255-122159967	chr8	+	122158826	122159996	True	NR_002835,NM_021021	chr8,chr8	+,-	HAS2-AS1,SNTB1	491589,-334517
chr19:46171449-46172052	chr19	+	46171695	46172101	True	NM_000164,NR_037512,NR_030372	chr19,chr19,chr19	+,-,+	GIPR,MIR642B,MIR642A	-244,6215,6084
chr2:102312957-102313240	chr2	+	102312966	102313289	True	NM_145687,NM_145686,NM_004834,NM_001145664	chr2,chr2,chr2,chr2	+,+,+,-	MAP4K4,MAP4K4,MAP4K4,RFX8	1198,1198,1198,-221801
chr9:116208224-116209261	chr9	+	116208382	116209144	True	NM_144488,NM_017443	chr9,chr9	+,-	RGS3,POLE3	-1430,-35353
chr4:6382135-6382750	chr4	+	6382185	6382771	True	NM_006005,NM_181876	chr4,chr4	+,-	WFS1,PPP2R2C	-110659,876
chr18:68096751-68097166	chr18	+	68096811	68097207	True	NM_173630,NM_004232	chr18,chr18	-,+	RTTN,SOCS6	-223849,-140732
chr15:83654680-83654946	chr15	+	83654692	83654982	True	NM_031452,NM_001160116	chr15,chr15	+,-	FAM103A1,C15orf40	12,25461
chr6:26126264-26126516	chr6	+	26126268	26126464	True	NM_003526,NM_003512	chr6,chr6	-,+	HIST1H2BC,HIST1H2AC	-2136,-1946
chr17:32934-33389	chr17	+	32946	33278	True	NM_001013672,NM_003585	chr17,chr17	+,-	C17orf97,DOC2B	226839,-1526
chr22:22021020-22021536	chr22	+	22021165	22021419	True	NM_148175,NM_148176,NM_014337,NM_001017964	chr22,chr22,chr22,chr22	+,+,+,-	PPIL2,PPIL2,PPIL2,YDJC	-943,-943,-943,-36825
chr20:44168127-44170017	chr20	+	44168242	44169094	True	NM_020398,NM_080827,NM_006103,NM_001198986	chr20,chr20,chr20,chr20	-,-,+,-	SPINLW1,WFDC6,WFDC2,SPINLW1-WFDC6	7023,-108,-69899,7023
chr19:18265402-18265606	chr19	+	18265405	18265541	True	NM_002866,NM_005027	chr19,chr19	-,+	RAB3A,PIK3R2	49383,-1440
chr10:126494797-126495736	chr10	+	126494962	126495612	True	NM_032182,NM_212554	chr10,chr10	+,-	FAM175B,METTL10	-4671,-14523
chr2:204399267-204399495	chr2	+	204399267	204399463	True	NM_203365,NM_213589,NM_006139	chr2,chr2,chr2	-,-,+	RAPH1,RAPH1,CD28	645,645,171734
chr16:54966663-54966934	chr16	+	54966679	54966863	True	NM_005853,NR_034105,NR_034106	chr16,chr16,chr16	+,-,-	IRX5,CRNDE,CRNDE	-1619,-3600,-3989
chr20:48767526-48768250	chr20	+	48767571	48768127	True	NM_001162505,NM_199129,NR_027889,NM_005194,NM_199203	chr20,chr20,chr20,chr20,chr20	-,-,-,+,-	TMEM189,TMEM189,TMEM189,CEBPB,TMEM189-UBE2V1	2258,2258,2258,39248,2258
chr7:128051988-128052736	chr7	+	128052079	128052481	True	NM_000883,NM_001142576,NM_001142574,NM_001142575,NM_001142573,NM_183243,NM_001098786,NM_001102605	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,-,+,-	IMPDH1,IMPDH1,IMPDH1,IMPDH1,IMPDH1,IMPDH1,C7orf68,IMPDH1	-2043,-2043,-6055,-6055,-6055,-2043,43402,-2043
chr12:125349809-125350592	chr12	+	125350110	125350506	True	NM_005505,NM_080626,NM_001082959	chr12,chr12,chr12	-,+,-	SCARB1,BRI3BP,SCARB1	-1591,127687,-1591
chr20:4128754-4129216	chr20	+	4128871	4129107	True	NM_175839,NM_000678,NM_175840,NM_175841,NM_175842	chr20,chr20,chr20,chr20,chr20	+,-,+,+,+	SMOX,ADRA1D,SMOX,SMOX,SMOX	342,100602,342,342,342
chr12:53494931-53495192	chr12	+	53495102	53495218	True	NM_002178,NM_003578,NM_032840	chr12,chr12,chr12	+,+,-	IGFBP6,SOAT2,SPRYD3	-3724,2055,-21898
chr8:20111674-20111937	chr8	+	20111702	20111912	True	NM_021020,NM_001693	chr8,chr8	-,+	LZTS1,ATP6V1B2	941,-57049
chr16:30995863-30996265	chr16	+	30995889	30996085	True	NM_001142778,NM_025193,NM_052874,NM_001142777	chr16,chr16,chr16,chr16	+,+,-,+	HSD3B7,HSD3B7,STX1B,HSD3B7	433,433,25794,433
chr2:152280776-152281331	chr2	+	152280899	152281190	True	NM_004688,NM_001177665	chr2,chr2	-,+	NMI,RIF1	-134469,-14355
chr19:12074964-12075421	chr19	+	12075035	12075459	True	NM_001080411,NM_001012753	chr19,chr19	-,+	ZNF433,ZNF763	71116,409
chr19:3092522-3093399	chr19	+	3092553	3093314	True	NM_002067,NM_198969	chr19,chr19	+,-	GNA11,AES	1093,-29589
chr17:2317953-2318156	chr17	+	2317989	2318145	True	NM_001098509,NR_028335	chr17,chr17	+,-	SGSM2,LOC284009	-77232,635
chr11:1707598-1709514	chr11	+	1708445	1709535	True	NR_026642,NM_001012416	chr11,chr11	-,+	FAM99B,KRTAP5-6	-1586,8889
chr11:1707598-1709514	chr11	-	1684810	1685654	False	NR_026642,NR_026643	chr11,chr11	-,+	FAM99B,FAM99A	21255,1174
chr12:57498268-57499239	chr12	+	57498321	57499093	True	NM_003153,NR_033659,NM_001178078,NM_005967,NM_001178079,NM_001178081,NM_001178080	chr12,chr12,chr12,chr12,chr12,chr12,chr12	-,-,-,+,-,-,-	STAT6,STAT6,STAT6,NAB2,STAT6,STAT6,STAT6	6153,6153,6153,-15695,5046,6153,6153
chr10:15901968-15902239	chr10	+	15901972	15902244	True	NM_024948,NM_001001484	chr10,chr10	-,+	FAM188A,PTER	325,576722
chr1:6445914-6446186	chr1	+	6445916	6446174	True	NM_007274,NM_181864,NM_031475	chr1,chr1,chr1	-,-,+	ACOT7,ACOT7,ESPN	7702,-33,38673
chr10:73975428-73975684	chr10	+	73975436	73975678	True	NM_173473,NM_001198798,NM_001198800,NM_001198799,NM_015947	chr10,chr10,chr10,chr10,chr10	+,-,-,-,-	ANAPC16,ASCC1,ASCC1,ASCC1,ASCC1	127,123,555,555,123
chr11:68607297-68607759	chr11	+	68607360	68607752	True	NM_001031847,NM_002180,NM_001876	chr11,chr11,chr11	-,+,-	CPT1A,IGHMBP2,CPT1A	1699,63566,1699
chr13:19800393-19801154	chr13	+	19800633	19800889	True	NM_006001,NR_034026	chr13,chr13	-,+	TUBA3C,LOC100287114	-44641,118299
chr15:44092883-44093127	chr15	+	44092898	44093164	True	NM_016400,NM_001033517,NM_001199885,NR_037673,NR_037672,NM_001199878,NM_001199876,NR_031695,NM_001199875,NM_001018108	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,-,+,+,+,+,+,-,+,+	C15orf63,SERINC4,C15orf63,SERF2-C15ORF63,SERF2,SERF2,SERF2,MIR1282,SERF2,SERF2	-330,-643,-330,-8775,-8775,-8374,-8775,-6941,-8775,-8909
chr2:24343471-24344062	chr2	+	24343758	24344079	True	NM_001145710,NM_199346	chr2,chr2	+,-	LOC375190,PFN4	2270,2135
chr8:66547501-66548185	chr8	+	66547806	66547873	True	NM_018120,NM_014637,NM_001145839	chr8,chr8,chr8	-,+,+	ARMC1,MTFR1,MTFR1	-1354,9014,9014
chr1:26126264-26126498	chr1	+	26126395	26126457	True	NM_206926,NM_020451,NR_024498	chr1,chr1,chr1	+,+,-	SEPN1,SEPN1,LOC646471	209,209,23690
chr5:172408545-172409137	chr5	+	172408573	172409064	True	NR_026682,NM_003945	chr5,chr5	-,+	LOC100268168,ATP6V0E1	-22202,1698
chr9:25675610-25677434	chr9	+	25675609	25677408	True	NM_001004125,NM_001099223	chr9,chr9	-,+	TUSC1,IFT74	1498,1269628
chr8:17944601-17946222	chr8	+	17944822	17946061	True	NM_177924,NM_001127505,NM_004315,NM_001160179	chr8,chr8,chr8,chr8	-,-,-,+	ASAH1,ASAH1,ASAH1,NAT1	-2943,-2315,-2315,81909
chrX:154265916-154266356	chrX	+	154266047	154266172	True	NM_023934,NM_000132	chrX,chrX	+,-	FUNDC2,F8	-11038,-15049
chr20:32803933-32805098	chr20	+	32804296	32804927	True	NM_001672,NM_000687	chr20,chr20	+,-	ASIP,AHCY	43243,86339
chr11:118123072-118124295	chr11	+	118123102	118124311	True	NM_198275,NM_000733	chr11,chr11	-,+	MPZL3,CD3E	-91,50983
chr4:109541737-109541979	chr4	+	109541740	109542028	True	NM_000995,NM_033625,NR_026968	chr4,chr4,chr4	+,+,-	RPL34,RPL34,LOC285456	-70,-43,-127
chr7:116164937-116165167	chr7	+	116164936	116165124	True	NR_002330,NM_001753,NM_001172896,NM_001172897,NM_001172895	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	ST7OT1,CAV1,CAV1,CAV1,CAV1	429314,-148,1222,1287,-14
chr8:70405209-70407006	chr8	+	70405582	70406991	True	NM_001128205,NM_001128206,NM_001146009	chr8,chr8,chr8	+,+,-	SULF1,SULF1,SLCO5A1	-605,-605,338464
chr5:126364661-126365578	chr5	+	126364681	126365499	True	NM_001198557,NM_178450	chr5,chr5	+,-	LMNB1,MARCH3	-251887,991
chr6:116600845-116601156	chr6	+	116600854	116601168	True	NM_003309,NM_001080976	chr6,chr6	-,+	TSPYL1,DSE	162,114
chr18:21976105-21977429	chr18	+	21976280	21977407	True	NM_080597,NM_018439	chr18,chr18	-,+	OSBPL1A,IMPACT	435,29201
chr8:99056309-99057372	chr8	+	99056482	99057374	True	NR_002581,NM_001170806,NM_000989	chr8,chr8,chr8	-,+,-	SNORA72,C8orf47,RPL30	-2037,19375,494
chr6:52657312-52657734	chr6	+	52657392	52657732	True	NM_145740,NM_014051	chr6,chr6	-,+	GSTA1,TMEM14A	10982,-121559
chr10:118199396-118200325	chr10	+	118199490	118200308	True	NM_005264,NM_001011709	chr10,chr10	-,+	GFRA1,PNLIPRP3	-166364,-12117
chr7:100771465-100772226	chr7	+	100771470	100772184	True	NM_003378,NM_001165413,NM_000602	chr7,chr7,chr7	-,+,+	VGF,SERPINE1,SERPINE1	36718,-1142,-1142
chr4:41217719-41218286	chr4	+	41217722	41218298	True	NM_173075,NM_001166050,NM_004307,NM_004181	chr4,chr4,chr4,chr4	-,-,-,+	APBB2,APBB2,APBB2,UCHL1	-1087,-1087,-1087,40599
chr4:39699809-39700025	chr4	+	39699816	39700034	True	NM_005339,NM_174921,NM_001111112,NM_001111113	chr4,chr4,chr4,chr4	+,-,+,+	UBE2K,C4orf34,UBE2K,UBE2K	-203,-59335,-203,-203
chr1:32829535-32829805	chr1	+	32829616	32829850	True	NM_052841,NM_001167676	chr1,chr1	+,-	TSSK3,LOC100128071	-1805,-1772
chr4:26596380-26597619	chr4	+	26596574	26597518	True	NM_018317,NM_000730	chr4,chr4	+,-	TBC1D19,CCKAR	-11087,-104532
chr22:42014990-42016432	chr22	+	42015179	42016081	True	NM_015704,NM_001469	chr22,chr22	-,+	PPPDE2,XRCC6	1038,1213
chr11:33036727-33037194	chr11	+	33036726	33037242	True	NM_139160,NM_001077242,NM_001326	chr11,chr11,chr11	+,+,-	DEPDC7,DEPDC7,CSTF3	485,167,145845
chr11:13476548-13478056	chr11	+	13476753	13477814	True	NM_001178,NM_032320	chr11,chr11	+,-	ARNTL,BTBD10	-177480,7082
chr7:149469252-149469500	chr7	+	149469254	149469527	True	NM_207336,NM_198455	chr7,chr7	-,+	ZNF467,SSPO	818,3603
chr17:5184099-5184502	chr17	+	5184260	5184508	True	NM_207103,NM_004703,NM_001083585	chr17,chr17,chr17	-,+,+	C17orf87,RABEP1,RABEP1	-46177,1049,1049
chr9:131085384-131086145	chr9	+	131085508	131085974	True	NM_016035,NM_015679	chr9,chr9	+,-	COQ4,TRUB2	-768,-811
chr17:79197029-79197234	chr17	+	79197077	79197209	True	NM_001009811,NM_014984,NM_001086521	chr17,chr17,chr17	-,-,+	AZI1,AZI1,C17orf89	-326,-326,15901
chr20:18128523-18129547	chr20	+	18128575	18129220	True	NR_028402,NM_020536,NM_021220	chr20,chr20,chr20	+,+,-	CSRP2BP,CSRP2BP,OVOL2	-2889,-5764,-90054
chr17:4699126-4699476	chr17	+	4699294	4699510	True	NM_002798,NM_001014985,NM_001144939,NM_001144941,NM_001144940,NM_182566	chr17,chr17,chr17,chr17,chr17,chr17	+,+,-,-,-,-	PSMB6,GLTPD2,VMO1,VMO1,VMO1,VMO1	-12,-7091,-9565,-9565,-9565,-9565
chr8:124057494-124058176	chr8	+	124057493	124058047	True	NM_001145088,NM_001134671,NM_024295	chr8,chr8,chr8	+,-,-	WDR67,DERL1,DERL1	26872,-2845,-2845
chr17:30718378-30718631	chr17	+	30718378	30718647	True	NM_003457,NM_022344	chr17,chr17	+,-	ZNF207,C17orf75	-41274,-49189
chr9:116634493-116634826	chr9	+	116634685	116634863	True	NM_133374,NM_001633	chr9,chr9	+,-	ZNF618,AMBP	3698,205939
chr13:77601002-77601215	chr13	+	77601101	77601215	True	NM_006493,NM_012158	chr13,chr13	+,-	CLN5,FBXL3	-35093,166
chr5:75913670-75913925	chr5	+	75913669	75913910	True	NR_028375,NM_004101	chr5,chr5	+,-	NCRUPAR,F2RL2	93852,5381
chr15:74421348-74421628	chr15	+	74421377	74421677	True	NM_001130137,NM_001130136,NM_001130138,NM_020851,NR_027073	chr15,chr15,chr15,chr15,chr15	+,+,+,+,-	ISLR2,ISLR2,ISLR2,ISLR2,LOC283731	318,37,912,1065,-8
chr16:56901293-56901527	chr16	+	56901340	56901492	True	NM_000339,NM_001126108,NR_029680,NM_001126107,NM_005950	chr16,chr16,chr16,chr16,chr16	+,+,+,+,-	SLC12A3,SLC12A3,MIR138-2,SLC12A3,MT1G	-2273,-2273,-8962,-2273,-199363
chr10:133110566-133110827	chr10	+	133110609	133110871	True	NM_018461,NM_174937	chr10,chr10	+,-	PPP2R2D,TCERG1L	637088,-625
chr1:78369113-78370523	chr1	+	78369385	78370540	True	NM_003902,NM_144573	chr1,chr1	-,+	FUBP1,NEXN	74289,-15236
chr10:115424941-115425410	chr10	+	115425014	115425227	True	NM_006175,NM_033340,NM_198060	chr10,chr10,chr10	-,+,-	NRAP,CASP7,NRAP	-1209,13707,-1209
chr4:148605100-148605484	chr4	+	148605125	148605503	True	NM_024605,NM_138364	chr4,chr4	+,-	ARHGAP10,PRMT10	47949,93
chr22:30964917-30965793	chr22	+	30965185	30965773	True	NM_004861,NM_000355	chr22,chr22	-,+	GAL3ST1,TCN2	-4309,37296
chr5:120952415-120953297	chr5	+	120952422	120953110	True	NM_001178102,NM_177478	chr5,chr5	-,+	LOX,FTMT	459858,234539
chr16:67698985-67699370	chr16	+	67698997	67699265	True	NM_016948,NM_001082487,NM_001082486,NM_022914,NM_001012984,NM_032140,NM_001037281	chr16,chr16,chr16,chr16,chr16,chr16,chr16	+,-,-,-,+,-,+	PARD6A,ACD,ACD,ACD,C16orf86,C16orf48,PARD6A	-4197,-4279,-4279,-4279,1451,1413,-4197
chr2:88094874-88096539	chr2	+	88095382	88095824	True	NM_001078170,NM_001032392	chr2,chr2	-,+	RGPD2,PLGLB1	29520,-47824
chr2:88094874-88096539	chr2	-	87200738	87200796	False	NM_001032392,NM_001024457	chr2,chr2	-,+	PLGLB1,RGPD1	48231,-56059
chr17:41401273-41401606	chr17	+	41401278	41401626	True	NR_027412,NM_145041	chr17,chr17	-,+	LOC100130581,TMEM106A	64701,-37435
chr19:17859047-17860811	chr19	+	17859378	17860670	True	NM_001161359,NM_001161358,NM_001080421,NM_015122,NM_001161357	chr19,chr19,chr19,chr19,chr19	+,+,-,+,+	FCHO1,FCHO1,UNC13A,FCHO1,FCHO1	1615,-903,-60370,1615,-903
chr20:3769746-3770311	chr20	+	3769757	3769840	True	NM_021873,NM_021872,NM_001810,NM_015417,NM_004358	chr20,chr20,chr20,chr20,chr20	+,+,-,-,+	CDC25B,CDC25B,CENPB,SPEF1,CDC25B	6560,6560,-2420,-7655,6560
chr8:74785350-74786386	chr8	+	74785461	74786190	True	NM_001001481,NM_018299,NM_001040613	chr8,chr8,chr8	-,-,+	UBE2W,UBE2W,TMEM70	4979,4979,102186
chr9:112172672-112173592	chr9	+	112172789	112173641	True	NR_026918,NM_001037293	chr9,chr9	-,+	PTPN3,PALM2	6472,229426
chr21:35738341-35738821	chr21	+	35738462	35738836	True	NM_001127670,NM_058182,NM_172201	chr21,chr21,chr21	-,+,+	KCNE1,FAM165B,KCNE2	89277,8912,-2191
chr12:48103577-48104662	chr12	+	48103640	48104680	True	NM_001146076,NM_001146075,NM_017842,NM_024604	chr12,chr12,chr12,chr12	-,-,+,-	RPAP3,RPAP3,SLC48A1,RPAP3	-3796,-3796,62286,-3796
chr9:46270746-46270970	chr9	+	46270923	46270987	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2640193,416578
chr9:46270746-46270970	chr9	-	45112330	45112394	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-122145,-1481600
chr18:48563247-48563897	chr18	+	48563646	48563879	True	NM_005359,NM_016626	chr18,chr18	+,-	SMAD4,MEX3C	-7114,160235
chrX:25032874-25033331	chrX	+	25032920	25033356	True	NM_139058,NR_003007	chrX,chrX	-,+	ARX,SCARNA23	759,-270413
chr17:48204894-48205916	chr17	+	48205174	48205932	True	NM_001199899,NM_174920	chr17,chr17	+,-	PDK2,SAMD14	-32167,1285
chr11:198433-198641	chr11	+	198531	198597	True	NM_053280,NM_145651,NM_021932,NM_016526,NM_001097610,NM_001098787	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,-,+,-	ODF3,SCGB1C1,RIC8A,BET1L,LOC653486,BET1L	-1821,-5502,9932,8875,-5502,8875
chr10:50396747-50398731	chr10	+	50397057	50398254	True	NM_001010863,NM_001135196	chr10,chr10	-,+	C10orf128,C10orf71	-650,108932
chr4:141270388-141272113	chr4	+	141270645	141271999	True	NM_001153446,NM_001153585,NM_001153690,NM_001153635,NR_033939	chr4,chr4,chr4,chr4,chr4	+,+,+,+,-	SCOC,SCOC,SCOC,SCOC,LOC100129858	-6113,-6095,-6095,-6113,22597
chr3:184547141-184549082	chr3	+	184547337	184548912	True	NM_022149,NM_015303	chr3,chr3	-,+	MAGEF1,VPS8	-117501,-17465
chr4:13546746-13548583	chr4	+	13546938	13548550	True	NR_015450,NM_001189,NR_003132	chr4,chr4,chr4	-,-,+	LOC285548,NKX3-2,HSP90AB2P	948,-824,-211960
chr8:92400565-92401153	chr8	+	92400640	92401195	True	NM_018710,NM_052832	chr8,chr8	-,+	TMEM55A,SLC26A7	-347437,-139182
chr19:49956876-49957262	chr19	+	49956907	49957275	True	NM_153329,NM_001145396,NM_017916	chr19,chr19,chr19	+,+,-	ALDH16A1,ALDH16A1,PIH1D1	-485,-485,-1792
chr14:31027911-31028153	chr14	+	31027921	31028201	True	NM_017769,NR_030354	chr14,chr14	+,-	G2E3,MIR624	127,455797
chr19:36426549-36427201	chr19	+	36426554	36427104	True	NR_033390,NM_024509	chr19,chr19	-,+	TYROBP,LRFN3	-27343,917
chr1:40972308-40973410	chr1	+	40972473	40973319	True	NM_022774,NM_014747	chr1,chr1	+,-	DEM1,RIMS3	1113,158065
chr19:17487728-17488114	chr19	+	17487749	17488139	True	NM_031310,NM_133644	chr19,chr19	-,+	PLVAP,GTPBP3	48,-39474
chr3:129117561-129117762	chr3	+	129117646	129117760	True	NR_003111,NM_018262,NR_002992	chr3,chr3,chr3	-,+,-	RPL32P3,IFT122,SNORA7B	572,41207,-1455
chr1:100816717-100817225	chr1	+	100816855	100817077	True	NM_033313,NM_033312,NM_001918,NM_003672	chr1,chr1,chr1,chr1	+,+,-,+	CDC14A,CDC14A,DBT,CDC14A	945,945,-101446,945
chr19:41353093-41353752	chr19	+	41353161	41353791	True	NM_000762,NM_053046	chr19,chr19	-,+	CYP2A6,EGLN2	2611,-47885
chr11:70510395-70511159	chr11	+	70510460	70511148	True	NM_133266,NM_138565	chr11,chr11	-,+	SHANK2,CTTN	-2537,-265899
chrX:139116568-139116934	chrX	+	139116606	139116948	True	NM_001013403,NM_000133	chrX,chrX	-,+	CXorf66,F9	-68929,-503762
chr8:86263899-86264691	chr8	+	86263915	86264708	True	NM_005181,NM_001164830	chr8,chr8	+,-	CA3,CA1	86347,-9972
chr6:159595442-159596773	chr6	+	159595524	159596809	True	NM_032532,NM_138810	chr6,chr6	+,-	FNDC1,TAGAP	-5146,-129340
chr19:45680872-45681222	chr19	+	45680947	45681218	True	NM_212550,NM_024108	chr19,chr19	+,-	BLOC1S3,TRAPPC6A	784,318
chr21:45138681-45138891	chr21	+	45138774	45138860	True	NM_003681,NM_000100	chr21,chr21	+,-	PDXK,CSTB	117,57449
chr7:29184099-29184740	chr7	+	29184275	29184777	True	NM_031311,NM_004067,NM_019029	chr7,chr7,chr7	-,+,-	CPVL,CHN2,CPVL	1426,49343,1426
chr20:17208031-17208275	chr20	+	17208080	17208307	True	NM_001201529,NM_001201528,NM_002594,NM_001195	chr20,chr20,chr20,chr20	+,+,+,-	PCSK2,PCSK2,PCSK2,BFSP1	-534,-1379,-534,303761
chr7:137004060-137004441	chr7	+	137004118	137004461	True	NM_002825,NR_030165	chr7,chr7	-,+	PTN,MIR490	24135,-416255
chr19:10230985-10231642	chr19	+	10231268	10231694	True	NM_002566,NM_003755	chr19,chr19	+,-	P2RY11,EIF3G	-9137,-669
chr20:38590701-38590996	chr20	+	38590716	38591045	True	NR_033905,NM_005461	chr20,chr20	+,-	DHX35,MAFB	-999786,726882
chr16:14397045-14397528	chr16	+	14397190	14397571	True	NR_029854,NM_001134477,NR_030177	chr16,chr16,chr16	+,-,+	MIR365-1,PARN,MIR193B	5570,326599,252
chrX:8433100-8433521	chrX	+	8433104	8433464	True	NM_001001888,NM_000216	chrX,chrX	+,-	VCX3B,KAL1	-284,266813
chrX:8433100-8433521	chrX	+	7810855	7810909	False	NM_013452,NM_004650	chrX,chrX	+,-	VCX,PNPLA4	-603,84616
chrX:8433100-8433521	chrX	-	8138821	8139074	False	NR_030380,NM_016378	chrX,chrX	+,-	MIR651,VCX2	-43866,284
chr15:32906418-32907065	chr15	+	32906460	32907062	True	NM_014783,NM_199357,NR_036650	chr15,chr15,chr15	+,+,-	ARHGAP11A,ARHGAP11A,LOC100288615	628,628,-80518
chr15:32906418-32907065	chr15	+	30917076	30917678	False	NM_148911,NM_001039841	chr15,chr15	-,+	CHRFAM7A,ARHGAP11B	-231212,1200
chr16:77452795-77453867	chr16	+	77453065	77453597	True	NM_001129979,NM_199355	chr16,chr16	+,-	SYCE1L,ADAMTS18	-219768,15464
chr16:77459311-77459659	chr16	+	77459361	77459631	True	NM_001129979,NM_199355	chr16,chr16	+,-	SYCE1L,ADAMTS18	-226064,9430
chr1:28050080-28050679	chr1	+	28050391	28050523	True	NM_152660,NM_022873,NM_001143915,NM_001143914,NM_001143913,NM_001143912	chr1,chr1,chr1,chr1,chr1,chr1	+,-,+,+,+,+	FAM76A,IFI6,FAM76A,FAM76A,FAM76A,FAM76A	1966,-51667,1966,1966,1966,1966
chr3:47423970-47424269	chr3	+	47424078	47424155	True	NM_012235,NM_015466	chr3,chr3	-,+	SCAP,PTPN23	93349,-1648
chr11:67222065-67223092	chr11	+	67222075	67222653	True	NM_145200,NM_206997	chr11,chr11	+,-	CABP4,GPR152	164,-1875
chr1:19283503-19283783	chr1	+	19283523	19283601	True	NM_001136265,NM_016183	chr1,chr1	-,+	IFFO2,MRTO4	-697,294473
chr3:9885773-9886196	chr3	+	9885836	9886212	True	NR_037162,NM_173659,NM_001142547	chr3,chr3,chr3	+,-,-	TTLL3,RPUSD3,RPUSD3	-34243,-134,-134
chr4:114826914-114828373	chr4	+	114827100	114828414	True	NM_001128174,NM_024590	chr4,chr4	+,-	UGT8,ARSJ	691196,72520
chr4:47053233-47054000	chr4	+	47053235	47053887	True	NM_000809,NM_000812	chr4,chr4	-,+	GABRA4,GABRB1	-56811,-19996
chr1:229479125-229479473	chr1	+	229479136	229479406	True	NM_145257,NM_006542	chr1,chr1	-,+	C1orf96,SPHAR	-448,-39065
chr21:34189377-34189800	chr21	+	34189396	34189845	True	NM_001162496,NM_001162495,NM_019596,NR_024623	chr21,chr21,chr21,chr21	-,-,-,+	C21orf62,C21orf62,C21orf62,C21orf49	-3343,-3343,-3343,-45036
chr19:38879991-38880390	chr19	+	38880043	38880417	True	NM_001042522,NM_001039616,NM_152657	chr19,chr19,chr19	+,+,-	SPRED3,SPRED3,GGN	521,521,-1375
chr2:64753732-64754434	chr2	+	64753863	64754363	True	NM_014755,NM_001002243,NM_017657,NM_203437	chr2,chr2,chr2,chr2	-,+,+,+	SERTAD2,AFTPH,AFTPH,AFTPH	126739,-2498,-2498,-2498
chr1:152647960-152648736	chr1	+	152648150	152648509	True	NM_178429,NM_178431	chr1,chr1	+,-	LCE2C,LCE3A	-430,-52571
chr22:51113687-51115006	chr22	+	51113850	51114938	True	NM_001080420,NM_001085428	chr22,chr22	+,-	SHANK3,ARSA	-831,-47249
chr1:37982873-37983813	chr1	+	37982897	37983606	True	NM_022756,NM_003462	chr1,chr1	-,+	MEAF6,DNALI1	-2533,38913
chr3:49236326-49236581	chr3	+	49236367	49236561	True	NM_178173,NM_001080528,NM_001135197	chr3,chr3,chr3	+,-,+	CCDC36,LOC646498,CCDC36	-557,-7076,371
chr6:90048677-90050585	chr6	+	90048776	90050420	True	NM_014942,NM_016021	chr6,chr6	+,-	ANKRD6,UBE2J1	92476,12251
chr6:42896757-42897223	chr6	+	42896834	42897230	True	NM_006586,NM_001008739	chr6,chr6	+,-	CNPY3,C6orf226	-25,-38280
chr5:128796051-128796259	chr5	+	128796147	128796215	True	NM_133638,NM_001999	chr5,chr5	+,-	ADAMTS19,FBN2	-95,-922412
chr20:34204991-34205236	chr20	+	34205032	34205188	True	NR_024377,NM_003116	chr20,chr20	-,+	FER1L4,SPAG4	-9548,-1274
chr8:145513679-145514759	chr8	+	145513703	145514663	True	NM_005526,NM_015201	chr8,chr8	+,-	HSF1,BOP1	606,507
chr17:21193287-21193722	chr17	+	21193306	21193728	True	NM_152914,NM_145109,NM_002756	chr17,chr17,chr17	-,+,+	C17orf103,MAP2K3,MAP2K3	-36728,-5389,-2009
chr2:120189730-120190547	chr2	+	120189794	120190324	True	NM_001017927,NM_183240	chr2,chr2	-,+	C2orf76,TMEM37	-65536,-400
chr5:176812671-176812903	chr5	+	176812672	176812920	True	NM_001029886,NM_001167579,NM_003052	chr5,chr5,chr5	-,+,+	PFN3,SLC34A1,SLC34A1	14767,-1291,-1291
chr20:55929407-55929833	chr20	+	55929554	55929832	True	NM_001190472,NM_001015885,NM_003610	chr20,chr20,chr20	-,+,+	MTRNR2L3,RAE1,RAE1	5096,-2987,-3460
chr12:79297863-79299208	chr12	+	79298087	79299226	True	NM_005639,NM_002583	chr12,chr12	+,-	SYT1,PAWR	-39698,785621
chr4:10022979-10023504	chr4	+	10023007	10023406	True	NM_000798,NM_020041	chr4,chr4	+,-	DRD5,SLC2A9	-239800,-39
chr4:24911682-24913578	chr4	+	24912183	24913306	True	NM_001130726,NM_003102	chr4,chr4	-,+	CCDC149,SOD3	1345,-115150
chr7:120970288-120970727	chr7	+	120970318	120970604	True	NM_057168,NM_016087,NM_001040020	chr7,chr7,chr7	+,+,-	WNT16,WNT16,FAM3C	-1279,-4948,65868
chr1:156051569-156052012	chr1	+	156051648	156051806	True	NM_001093725,NM_020387	chr1,chr1	-,+	MEX3A,RAB25	33,-20733
chr6:6008061-6008261	chr6	+	6008065	6008217	True	NM_016588,NM_004271	chr6,chr6	-,+	NRN1,LY86	-432,580716
chr4:144442589-144442997	chr4	+	144442600	144442906	True	NM_001168235,NM_003601	chr4,chr4	-,+	FREM3,SMARCA5	178982,-8048
chr20:23104217-23105394	chr20	+	23104332	23105311	True	NR_034149,NM_001052	chr20,chr20	-,+	LOC200261,SSTR4	8020,-88333
chr19:50146979-50148237	chr19	+	50147047	50147821	True	NM_021228,NM_006270	chr19,chr19	+,-	SCAF1,RRAS	-1716,-3647
chr1:155714313-155714803	chr1	+	155714621	155714860	True	NM_139118,NR_024117	chr1,chr1	-,+	YY1AP1,MSTO2P	-55798,748
chr3:48752203-48754166	chr3	+	48752378	48754086	True	NM_001005910,NM_001005911,NR_027437,NR_027438,NM_001146178,NM_001146179,NM_006321,NM_001190317,NM_001190316,NM_001005909,NM_016291	chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3,chr3	-,-,-,-,-,-,+,-,-,-,-	IP6K2,IP6K2,IP6K2,IP6K2,IP6K2,IP6K2,ARIH2,IP6K2,IP6K2,IP6K2,IP6K2	675,675,675,675,675,675,202194,675,675,675,675
chr6:167659700-167661498	chr6	+	167659900	167661414	True	NM_005299,NM_001143947	chr6,chr6	-,+	GPR31,UNC93A	-88581,43388
chr19:9434268-9434700	chr19	+	9434290	9434609	True	NM_001172650,NM_001202425,NM_032497,NM_198535,NM_001202409,NM_001202408,NM_001202407,NM_001202406,NM_001202410,NM_001202411,NM_001202412	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,+,+,-,+,+,+,+,+,+,+	ZNF559-ZNF177,ZNF559-ZNF177,ZNF559,ZNF699,ZNF559,ZNF559,ZNF559,ZNF559,ZNF559,ZNF559,ZNF559	292,761,-23,-18495,-23,-23,-23,-23,-23,-23,292
chr15:78234091-78234637	chr15	+	78234462	78234674	True	NM_001101404,NR_027024	chr15,chr15	+,-	SH2D7,LOC645752	150252,-15274
chr10:71563849-71564841	chr10	+	71564109	71564770	True	NM_080802,NM_080800,NM_001130103,NM_080801,NM_080798,NM_020999,NM_080805	chr10,chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,+,+,-,+	COL13A1,COL13A1,COL13A1,COL13A1,COL13A1,NEUROG3,COL13A1	-2516,-2516,-2516,-2516,-2516,-230899,-2516
chr20:44439836-44441180	chr20	+	44439918	44441079	True	NM_181803,NM_181802,NM_181801,NM_181800,NM_007019,NM_003279,NM_181799	chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,+,+,+,+,-,+	UBE2C,UBE2C,UBE2C,UBE2C,UBE2C,TNNC2,UBE2C	175,175,592,175,175,14924,175
chr19:54385079-54385314	chr19	+	54385078	54385170	True	NM_144687,NM_002739	chr19,chr19	-,+	NLRP12,PRKCG	-57430,296
chr6:50683035-50683587	chr6	+	50683056	50683562	True	NM_172238,NM_001037498	chr6,chr6	+,-	TFAP2D,DEFB112	-1850,-666692
chr12:56207200-56208455	chr12	+	56207201	56208381	True	NR_026723,NR_026722,NM_033082,NM_014182	chr12,chr12,chr12,chr12	-,-,-,+	SARNP,SARNP,SARNP,ORMDL2	3209,3209,3209,3424
chr1:201950625-201951543	chr1	+	201950650	201951333	True	NM_020216,NM_012134	chr1,chr1	+,-	RNPEP,LMOD1	432,-34934
chr15:35282578-35283492	chr15	+	35282863	35283331	True	NM_014106,NR_003144	chr15,chr15	-,+	ZNF770,LOC723972	-2366,246195
chr11:308165-308471	chr11	+	308165	308437	True	NM_006435,NM_003641,NM_001025295	chr11,chr11,chr11	+,+,-	IFITM2,IFITM1,IFITM5	-109,5553,-8639
chr10:13543769-13544652	chr10	+	13544116	13544684	True	NM_003675,NM_152751,NM_001100912	chr10,chr10,chr10	+,-,-	PRPF18,BEND7,BEND7	84254,342,342
chr1:70666116-70667375	chr1	+	70666524	70667240	True	NM_017768,NM_004768,NM_001190987	chr1,chr1,chr1	-,+,+	LRRC40,SRSF11,SRSF11	4181,4124,4124
chr7:6544495-6545293	chr7	+	6544596	6545340	True	NM_006854,NM_001134387	chr7,chr7	-,+	KDELR2,ZDHHC4	-20747,71724
chr11:237287-238525	chr11	+	237431	238508	True	NM_002817,NM_175932,NM_001017524,NM_012239	chr11,chr11,chr11,chr11	+,+,-,-	PSMD13,PSMD13,SIRT3,SIRT3	-674,-674,-1069,-1069
chr17:66038852-66040113	chr17	+	66039020	66039913	True	NM_002266,NM_181656	chr17,chr17	+,-	KPNA2,C17orf58	-7223,-49255
chr9:78502901-78503445	chr9	+	78503021	78503395	True	NM_006200,NR_031679,NM_001190482	chr9,chr9,chr9	+,-,+	PCSK5,MIR548H3,PCSK5	2164,-164277,2164
chr2:232259524-232260099	chr2	+	232259529	232260147	True	NR_002921,NM_145236	chr2,chr2	-,+	SNORA75,B3GNT7	60550,187
chr5:56590481-56591414	chr5	+	56590515	56591032	True	NM_001127236,NM_001017992	chr5,chr5	+,-	GPBP1,ACTBL2	-80665,187675
chrY:22746231-22746800	chrY	+	22746251	22746828	True	NM_004681,NR_001542	chrY,chrY	+,-	EIF1AY,TTTY10	-8698,-65137
chr14:24664538-24664792	chr14	+	24664628	24664766	True	NM_006405,NM_001014842,NM_001184739,NM_024658	chr14,chr14,chr14,chr14	-,-,+,-	TM9SF1,TM9SF1,TSSK4,IPO4	166,166,10159,-6504
chr1:27963540-27964118	chr1	+	27963577	27964125	True	NM_001143912,NM_005248	chr1,chr1	+,-	FAM76A,FGR	88364,-1850
chr21:45972593-45973176	chr21	+	45972758	45973233	True	NM_198696,NM_198687,NM_198693	chr21,chr21,chr21	-,+,-	KRTAP10-3,KRTAP10-4,KRTAP10-2	5469,20372,-1370
chr1:16816847-16817379	chr1	+	16816846	16817200	True	NR_023386,NM_018090	chr1,chr1	-,+	CROCCP3,NECAP2	2046,-49730
chr13:33586945-33588077	chr13	+	33587234	33587976	True	NM_004795,NM_178007	chr13,chr13	+,-	KL,STARD13	2594,172300
chr17:21195178-21196101	chr17	+	21195217	21195687	True	NM_152914,NM_145109,NM_002756	chr17,chr17,chr17	-,+,+	C17orf103,MAP2K3,MAP2K3	-38639,-7300,-3920
chrX:110578511-110579029	chrX	+	110578513	110578771	True	NR_033974,NM_014289	chrX,chrX	+,-	DKFZp686D0853,CAPN6	176118,-64739
chr11:58949461-58949773	chr11	+	58949484	58949812	True	NM_001039396,NM_015177	chr11,chr11	-,+	MPEG1,DTX4	30732,-9723
chr6:24910748-24911126	chr6	+	24910905	24911147	True	NM_015895,NM_014722	chr6,chr6	+,-	GMNN,FAM65B	-135792,98
chr1:110168973-110169403	chr1	+	110168981	110169427	True	NM_139156,NM_005272,NM_203404,NM_004037	chr1,chr1,chr1,chr1	+,-,+,+	AMPD2,GNAT2,AMPD2,AMPD2	-6573,-13276,-983,-5756
chr3:58286129-58287585	chr3	+	58286962	58287612	True	NM_007042,NM_004944,NM_001098783	chr3,chr3,chr3	+,-,+	RPP14,DNASE1L3,RPP14	4361,-86564,4359
chr11:67182287-67182670	chr11	+	67182472	67182658	True	NM_001166222,NM_020811,NM_206873	chr11,chr11,chr11	+,+,-	CARNS1,CARNS1,PPP1CA	490,490,-13096
chr2:128856226-128857175	chr2	+	128856480	128857130	True	NM_024545,NM_020120,NR_027671	chr2,chr2,chr2	-,+,+	SAP130,UGGT1,UGGT1	-71611,-7787,-7759
chr2:69618741-69620371	chr2	+	69619080	69620423	True	NM_002056,NR_036073	chr2,chr2	-,+	GFPT1,MIR3126	-4698,-288328
chr16:579916-580630	chr16	+	580026	580614	True	NM_005632,NR_024121	chr16,chr16	+,-	SOLH,NCRNA00235	-2221,-2619
chr12:57389241-57389721	chr12	+	57389252	57389636	True	NM_007264,NM_014830	chr12,chr12	+,-	GPR182,ZBTB39	-948,10711
chr11:67220031-67220802	chr11	+	67220241	67220846	True	NM_020441,NM_145200,NM_206997,NM_001018070	chr11,chr11,chr11,chr11	-,+,-,-	CORO1B,CABP4,GPR152,CORO1B	-9258,1971,-41,-8978
chr14:39642065-39642987	chr14	+	39642081	39642858	True	NM_001079537,NM_177452,NM_002687	chr14,chr14,chr14	-,-,+	TRAPPC6B,TRAPPC6B,PNN	-2447,-2447,1528
chr2:25566483-25566937	chr2	+	25566543	25566865	True	NM_014971,NM_175630,NM_175629,NM_022552	chr2,chr2,chr2,chr2	+,-,-,-	EFR3B,DNMT3A,DNMT3A,DNMT3A	-301621,-1084,-1084,-1769
chr1:185147230-185148323	chr1	+	185147241	185148107	True	NM_017673,NM_001202423	chr1,chr1	+,-	SWT1,TRMT1L	-21002,-21011
chr2:152116897-152117595	chr2	+	152116975	152117614	True	NM_007115,NM_198557	chr2,chr2	+,-	TNFAIP6,RBM43	96491,827
chr17:76184221-76184591	chr17	+	76184331	76184477	True	NM_001010982,NR_027083,NM_001145526,NM_003258	chr17,chr17,chr17,chr17	+,+,+,-	AFMID,AFMID,AFMID,TK1	-984,-984,-984,-1046
chr4:183244258-183245271	chr4	+	183244322	183245270	True	NM_001080477,NR_027107	chr4,chr4	+,-	ODZ3,MGC45800	46,-178654
chr12:52845250-52845512	chr12	+	52845283	52845545	True	NM_002284,NM_005555	chr12,chr12	+,-	KRT86,KRT6B	-149685,415
chr12:52845250-52845512	chr12	+	52866942	52867204	False	NM_173086,NM_002284	chr12,chr12	-,+	KRT6C,KRT86	415,-171344
chr12:52845250-52845512	chr12	+	52886413	52886655	False	NM_002284,NM_005554	chr12,chr12	+,-	KRT86,KRT6A	-190815,576
chr6:5254303-5255118	chr6	+	5254417	5255131	True	NM_006567,NM_020408,NM_001164840,NM_001164841	chr6,chr6,chr6,chr6	+,-,-,-	FARS2,LYRM4,LYRM4,LYRM4	6452,6095,6095,6095
chr12:6833290-6834242	chr12	+	6833346	6834278	True	NM_001164095,NM_016319,NM_153685,NM_001164093,NM_001164094	chr12,chr12,chr12,chr12,chr12	+,+,-,+,+	COPS7A,COPS7A,C12orf53,COPS7A,COPS7A	-152,-217,-23534,52,-247
chr1:92492188-92493310	chr1	+	92492779	92493012	True	NM_001195684,NM_173567	chr1,chr1	-,+	TGFBR3,EPHX4	-121220,2520
chr1:6446556-6447163	chr1	+	6446556	6447212	True	NM_007274,NM_181864,NM_031475	chr1,chr1,chr1	-,-,+	ACOT7,ACOT7,ESPN	6664,-673,37635
chr5:99878912-99879434	chr5	+	99879107	99879275	True	NR_027503,NM_198507	chr5,chr5	-,+	LOC100133050,FAM174A	-155149,-8034
chr8:145723174-145723467	chr8	+	145723178	145723516	True	NM_032902,NM_005309,NM_004260	chr8,chr8,chr8	+,+,-	PPP1R16A,GPT,RECQL4	-1120,5948,19744
chr8:144328800-144329056	chr8	+	144329009	144329089	True	NM_173832,NM_001130478	chr8,chr8	+,-	ZFP41,LY6H	19,-86956
chr6:12715534-12716109	chr6	+	12715641	12716131	True	NM_001143964,NM_030948	chr6,chr6	-,+	TBC1D7,PHACTR1	612706,1701
chr6:34214916-34215579	chr6	+	34215018	34215285	True	NM_001008704,NM_145905,NM_178508,NM_001008703	chr6,chr6,chr6,chr6	-,+,-,-	C6orf1,HMGA1,C6orf1,C6orf1	1670,-8501,1670,1670
chr13:19524388-19525243	chr13	+	19524576	19525204	True	NR_027995,NR_026852	chr13,chr13	-,+	LOC284232,LOC348021	-78467,57194
chr19:43576010-43576422	chr19	+	43576019	43576427	True	NR_036584,NM_031246	chr19,chr19	+,-	LOC100289650,PSG2	-250055,10516
chr8:142011649-142011858	chr8	+	142011681	142011907	True	NM_153831,NM_005607,NM_014957,NM_001199649	chr8,chr8,chr8,chr8	-,-,+,-	PTK2,PTK2,DENND3,PTK2	-269,-269,126812,-269
chr1:179850170-179851573	chr1	+	179850526	179851621	True	NM_015602,NM_145034,NM_001199260,NM_022347	chr1,chr1,chr1,chr1	+,-,-,-	TOR1AIP1,TOR1AIP2,TOR1AIP2,TOR1AIP2	172,-3585,-3585,-3585
chr22:34317325-34317531	chr22	+	34317365	34317441	True	NM_133642,NM_000362,NM_004737	chr22,chr22,chr22	-,+,-	LARGE,TIMP3,LARGE	-949,-1120614,-949
chr12:124197684-124198666	chr12	+	124197862	124198706	True	NM_012463,NM_001414	chr12,chr12	+,-	ATP6V0A2,EIF2B1	-1060,-79539
chr7:105621306-105622634	chr7	+	105621468	105622569	True	NM_152750,NM_152749	chr7,chr7	+,-	CDHR3,ATXN7L1	-17862,-104437
chr10:134119371-134119671	chr10	+	134119403	134119633	True	NM_001143758,NM_173575	chr10,chr10	+,-	LRRC27,STK32C	25980,1894
chr3:194072629-194074022	chr3	+	194072909	194073943	True	NM_001080513,NR_033929	chr3,chr3	-,+	CPN2,FLJ34208	-852,133925
chr1:236275631-236276523	chr1	+	236275726	236276542	True	NM_002508,NM_003272	chr1,chr1	-,+	NID1,GPR137B	-47245,29289
chr7:6616666-6616939	chr7	+	6616676	6616956	True	NM_001145118,NM_001134387,NM_001134388,NM_001134389,NM_018106	chr7,chr7,chr7,chr7,chr7	-,+,+,+,+	GRID2IP,ZDHHC4,ZDHHC4,ZDHHC4,ZDHHC4	-25609,108,108,108,108
chr1:110169493-110169801	chr1	+	110169665	110169787	True	NM_139156,NM_005272,NM_203404,NM_004037	chr1,chr1,chr1,chr1	+,-,+,+	AMPD2,GNAT2,AMPD2,AMPD2	-7257,-13960,-1667,-6440
chr22:38218003-38218310	chr22	+	38218006	38218194	True	NM_138797,NM_003614	chr22,chr22	-,+	ANKRD54,GALR3	22209,1194
chr3:149825479-149826730	chr3	+	149825494	149826603	True	NM_053024,NR_036538	chr3,chr3	-,+	PFN2,LOC646903	-136753,-136488
chr16:31020739-31020961	chr16	+	31020738	31020978	True	NM_052874,NM_004604	chr16,chr16	-,+	STX1B,STX4	901,23924
chr19:29701654-29702906	chr19	+	29702316	29702944	True	NR_027318,NM_006003	chr19,chr19	+,-	LOC148145,UQCRFS1	-246329,1242
chr22:38248104-38249444	chr22	+	38248391	38249247	True	NR_030395,NM_138797,NM_016091,NR_030396,NR_036556	chr22,chr22,chr22,chr22,chr22	-,-,+,-,-	MIR658,ANKRD54,EIF3L,MIR659,ANKRD54	-8013,-8038,-3073,-4610,-8038
chr15:82643031-82645027	chr15	+	82644087	82644603	True	NM_001164465,NR_024474,NR_004847	chr15,chr15,chr15	-,+,+	GOLGA6L10,UBE2Q2P3,UBE2Q2P2	-2381,2682,2682
chr15:82643031-82645027	chr15	-	84901589	84902105	False	NR_027001,NR_033738	chr15,chr15	-,+	LOC388152,LOC440300	-2669,-41040
chr15:82643031-82645027	chr15	+	82941578	82942094	False	NR_026811,NR_033936,NR_033579	chr15,chr15,chr15	+,+,-	LOC80154,LOC727849,LOC440297	2727,2698,44383
chr15:82643031-82645027	chr15	+	83020579	83021095	False	NM_001164465,NR_024474,NR_004847	chr15,chr15,chr15	-,+,+	GOLGA6L10,UBE2Q2P3,UBE2Q2P2	-2381,2677,2677
chr7:158940105-158940925	chr7	+	158940109	158940916	True	NR_024394	chr7	+	LOC154822	-139115
chr8:21882011-21882244	chr8	+	21882010	21882276	True	NM_024815,NM_182795	chr8,chr8	-,+	NUDT18,NPM2	84706,77
chr2:25393667-25394900	chr2	+	25393992	25394790	True	NM_001035256,NM_000939,NM_014971	chr2,chr2,chr2	-,-,+	POMC,POMC,EFR3B	-2433,-2433,-129070
chr2:139517592-139518940	chr2	+	139517826	139518840	True	NM_007226,NR_033658	chr2,chr2	-,+	NXPH2,LOC647012	19021,136053
chr14:21521506-21522845	chr14	+	21521981	21522767	True	NM_001012264,NM_138331	chr14,chr14	-,+	RNASE13,RNASE8	-19037,3284
chr19:39897771-39898013	chr19	+	39897804	39898056	True	NM_019088,NM_003407,NM_022835	chr19,chr19,chr19	-,+,+	PAF1,ZFP36,PLEKHG2	-16125,-368,5693
chr5:169726182-169727918	chr5	+	169726494	169727724	True	NM_005565,NR_026945	chr5,chr5	-,+	LCP2,LOC257358	-1672,30710
chr11:64778373-64779873	chr11	+	64778578	64779873	True	NM_001199745,NR_037650,NM_001667,NM_138456	chr11,chr11,chr11,chr11	+,+,+,-	ARL2,ARL2-SNX15,ARL2,BATF2	1711,1711,1711,-14061
chr11:68079414-68079618	chr11	+	68079480	68079613	True	NM_022338,NM_002335	chr11,chr11	-,+	C11orf24,LRP5	-40011,494
chrX:134350286-134350559	chrX	+	134350313	134350463	True	NM_017863,NM_152695	chrX,chrX	-,+	CXorf48,ZNF449	-44562,128232
chrX:134350286-134350559	chrX	-	134289936	134290086	False	NM_001031705,NM_001078171	chrX,chrX	-,+	CXorf48,FAM127A	15716,-123654
chr16:46721945-46722276	chr16	+	46721974	46722314	True	NM_014321,NR_037620,NM_018206	chr16,chr16,chr16	+,+,-	ORC6,ORC6,VPS35	1243,1243,880
chr17:76629833-76630999	chr17	+	76630128	76630873	True	NM_173628,NM_024419	chr17,chr17	-,+	DNAH17,PGS1	-56652,-255451
chr2:20251511-20252195	chr2	+	20251539	20252217	True	NM_014713,NR_033875	chr2,chr2	-,+	LAPTM4A,FLJ12334	-2,-182975
chr20:30060010-30061026	chr20	+	30060284	30061048	True	NM_001037500,NM_014012	chr20,chr20	-,+	DEFB124,REM1	82,2056
chr3:138152470-138152814	chr3	+	138152528	138152724	True	NM_031913,NM_178130	chr3,chr3	+,-	ESYT3,TXNDC6	690,-103800
chr3:195167691-195169643	chr3	+	195167828	195169427	True	NM_012287,NR_003265	chr3,chr3	-,+	ACAP2,SDHAP2	-4011,215482
chr4:90744213-90745037	chr4	+	90744300	90744932	True	NM_001146054,NM_007351	chr4,chr4	-,+	SNCA,MMRN1	13259,71119
chr1:206275325-206276578	chr1	+	206275334	206275990	True	NM_001910,NM_001007544	chr1,chr1	+,-	CTSE,C1orf186	41468,12707
chr17:53343317-53343528	chr17	+	53343423	53343497	True	NM_002126,NM_012329	chr17,chr17	+,-	HLF,MMD	-1155,155894
chrX:53257676-53258361	chrX	+	53257832	53258335	True	NM_004187,NM_022117,NM_001146702	chrX,chrX,chrX	-,+,-	KDM5C,TSPYL2,KDM5C	-3228,-146350,-3228
chr9:6718806-6719668	chr9	+	6718928	6719538	True	NM_000170,NM_001146696	chr9,chr9	-,+	GLDC,KDM4C	-73236,1324
chr12:50495769-50496413	chr12	+	50495814	50496384	True	NM_032901,NM_147190,NM_005276	chr12,chr12,chr12	+,-,+	C12orf62,LASS5,GPD1	9515,64763,1416
chr8:23262359-23263138	chr8	+	23262477	23263006	True	NM_001136108,NM_002318	chr8,chr8	+,-	R3HCC1,LOXL2	-116916,-755
chr6:33265762-33266309	chr6_qbl_hap6	+	4498132	4498442	False	NM_001164267,NR_028387,NM_004761,NM_005452,NM_001185181,NM_014260	chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6,chr6_qbl_hap6	-,-,-,-,+,+	WDR46,RGL2,RGL2,WDR46,PFDN6,PFDN6	-8585,1024,1024,-8585,-8528,-8562
chr6:33265762-33266309	chr6_mcf_hap5	+	4739636	4739946	False	NR_028387,NM_014260,NM_001164267,NM_005452,NM_004761	chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5,chr6_mcf_hap5	-,+,-,-,-	RGL2,PFDN6,WDR46,WDR46,RGL2	1024,-8565,-8588,-8588,1024
chr6:33265762-33266309	chr6_cox_hap2	+	4709706	4710016	False	NR_028387,NM_014260,NM_001164267,NM_005452,NM_004761	chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2,chr6_cox_hap2	-,+,-,-,-	RGL2,PFDN6,WDR46,WDR46,RGL2	1024,-8565,-8588,-8588,1024
chr6:33265762-33266309	chr6	+	33265892	33266202	True	NM_001164267,NR_028387,NM_004761,NM_005452,NM_001185181,NM_014260	chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,-,+,+	WDR46,RGL2,RGL2,WDR46,PFDN6,PFDN6	-8588,1024,1024,-8588,-8531,-8565
chr6:33265762-33266309	chr6_dbb_hap3	+	4547218	4547528	False	NR_028387,NM_014260,NM_001164267,NM_005452,NM_004761	chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3,chr6_dbb_hap3	-,+,-,-,-	RGL2,PFDN6,WDR46,WDR46,RGL2	1024,-8565,-8588,-8588,1024
chr19:49151382-49151982	chr19	+	49151539	49151744	True	NM_001217,NR_004401	chr19,chr19	-,+	CA11,SEC1	-2088,-10301
chr10:60935980-60936353	chr10	+	60935988	60936206	True	NM_032439,NM_001001971,NM_001143774	chr10,chr10,chr10	+,-,+	PHYHIPL,FAM13C,PHYHIPL	141,186196,1020
chr11:66824714-66824989	chr11	+	66824731	66824987	True	NM_014578,NM_001040716	chr11,chr11	+,-	RHOD,PC	-493,-98884
chr2:218989087-218990643	chr2	+	218989150	218990526	True	NM_000634,NM_001557,NM_001168298	chr2,chr2,chr2	-,+,+	CXCR1,CXCR2,CXCR2	41240,209,9
chr1:46713745-46713953	chr1	+	46713808	46713940	True	NM_003579,NM_001142548,NR_024332	chr1,chr1,chr1	+,+,-	RAD54L,RAD54L,POMGNT1	-492,-492,-27831
chr6:36305309-36307148	chr6	+	36305785	36307110	True	NM_001010903,NM_001145717	chr6,chr6	-,+	C6orf222,PNPLA1	-1123,-67607
chr2:130899867-130901564	chr2	+	130900248	130901240	True	NM_207310,NR_033903	chr2,chr2	-,+	CCDC74B,LOC285103	1441,-13103
chr13:50569450-50570383	chr13	+	50569574	50570324	True	NM_005798,NM_052811,NR_037407,NM_001007278,NM_213590	chr13,chr13,chr13,chr13,chr13	+,+,-,+,+	TRIM13,TRIM13,MIR3613,TRIM13,TRIM13	818,818,363,818,818
chr1:93252452-93253058	chr1	+	93252520	93253020	True	NM_005665,NM_000969	chr1,chr1	-,+	EVI5,RPL5	4991,44573
chr3:44665638-44666347	chr3	+	44665775	44666395	True	NM_001024855,NM_020696,NM_006991	chr3,chr3,chr3	+,-,+	ZNF197,KIAA1143,ZNF197	115,136828,115
chr3:142607210-142607424	chr3	+	142607209	142607283	True	NM_013363,NM_001080415	chr3,chr3	-,+	PCOLCE2,U2SURP	812,113088
chr19:10614984-10615193	chr19	+	10614999	10615135	True	NM_203500,NM_012289,NM_032885	chr19,chr19,chr19	-,-,+	KEAP1,KEAP1,ATG4D	-945,-1518,39511
chr6:144480337-144481230	chr6	+	144480351	144480943	True	NM_031287,NM_003764	chr6,chr6	-,+	SF3B5,STX11	-63597,-8748
chr15:101793971-101794402	chr15	+	101794090	101794284	True	NM_014918,NM_024652	chr15,chr15	-,+	CHSY1,LRRK1	-1953,-334689
chr3:131098603-131099323	chr3	+	131098731	131099199	True	NM_001171905,NR_033268,NM_001171906,NR_002985,NM_152395	chr3,chr3,chr3,chr3,chr3	+,+,+,-,+	NUDT16,NUDT16,NUDT16,SNORA58,NUDT16	1315,1425,1409,98928,1409
chr9:33477936-33478865	chr9	+	33478310	33478643	True	NM_022917,NR_003573,NM_139235	chr9,chr9,chr9	-,+,-	NOL6,ANXA2P2,NOL6	-4369,145579,-4369
chr1:223844956-223845391	chr1	+	223844994	223845195	True	NM_001146068,NM_001143962	chr1,chr1	+,-	CAPN2,CAPN8	44099,8295
chr9:95823708-95824347	chr9	+	95823730	95824362	True	NM_004148,NM_145006	chr9,chr9	-,+	NINJ1,SUSD3	72258,-2792
chr7:74281521-74281755	chr7	+	74281535	74281605	True	NM_173537,NR_027775	chr7,chr7	-,+	GTF2IRD2,PMS2P5	-13694,25288
chr7:74281521-74281755	chr7	-	74494624	74494694	False	NM_030798,NM_001003795	chr7,chr7	-,+	WBSCR16,GTF2IRD2B	-4925,13652
chr15:90320632-90321196	chr15	+	90320661	90321243	True	NM_001039958,NM_018670	chr15,chr15	+,-	MESP2,MESP1	-1123,-26121
chr6:1097505-1097922	chr6	+	1097505	1097939	True	NR_027116,NR_027115,NM_033260	chr6,chr6,chr6	-,-,+	LOC285768,LOC285768,FOXQ1	3678,3678,214735
chr20:44561811-44562385	chr20	+	44561982	44562334	True	NM_022104,NM_182676	chr20,chr20	+,-	PCIF1,PLTP	982,-21196
chr7:74679345-74681290	chr7	+	74679787	74681075	True	NM_001003795,NR_003580	chr7,chr7	+,-	GTF2IRD2B,LOC100093631	-171492,-26328
chr7:74679345-74681290	chr7	-	72541550	72542837	False	NR_003664,NR_003580	chr7,chr7	-,+	SPDYE8P,LOC100093631	-41241,26174
chr7:74679345-74681290	chr7	+	74894044	74895331	False	NM_001145064,NR_003664	chr7,chr7	-,+	GATSL2,SPDYE8P	-26703,41201
chr7:74679345-74681290	chr7	-	74351012	74352178	False	NM_001025202,NM_001145063	chr7,chr7	-,+	STAG3L2,GATSL1	-44281,26904
chrX:47985545-47986230	chrX	+	47985641	47985895	True	NM_205856,NR_033730,NM_001079900	chrX,chrX,chrX	+,-,+	SPACA5,ZNF630,SPACA5B	707,-54616,4143
chr5:147203481-147205095	chr5	+	147203491	147204682	True	NM_003122,NM_054023	chr5,chr5	-,+	SPINK1,SCGB3A2	6635,53591
chr1:166916180-166916814	chr1	+	166916191	166916839	True	NM_199351,NM_032858	chr1,chr1	-,+	ILDR2,MAEL	27772,41679
chr11:32457405-32457698	chr11	+	32457500	32457746	True	NM_024426,NM_001198551,NM_024424,NR_023920,NM_000378,NM_001198552	chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,+,-,-	WT1,WT1,WT1,WT1-AS,WT1,WT1	-419,-5137,-419,-267,-419,-5137
chr11:64913616-64914101	chr11	+	64913824	64914064	True	NM_001008778,NM_172230	chr11,chr11	+,-	SPDYC,SYVN1	23642,-11821
chr1:156610367-156611759	chr1	+	156610601	156611743	True	NM_198427,NM_006617,NM_021948	chr1,chr1,chr1	+,-,+	BCAN,NES,BCAN	-4,35496,-4
chr20:4679980-4680740	chr20	+	4680151	4680777	True	NR_024267,NM_001080123	chr20,chr20	-,+	PRNT,PRNP	40587,-13045
chr16:11921523-11922983	chr16	+	11921973	11922914	True	NR_024050,NM_001192,NR_024049	chr16,chr16,chr16	-,+,-	BCAR4,TNFRSF17,BCAR4	-36,136049,-36
chr2:216972526-216973945	chr2	+	216972622	216973842	True	NM_018441,NM_021141	chr2,chr2	-,+	PECR,XRCC5	-26083,177
chr3:55690537-55691642	chr3	+	55690547	55691453	True	NR_024615,NM_001012506	chr3,chr3	-,+	C3orf51,CCDC66	2094,899730
chr11:62459446-62460272	chr11	+	62459728	62460160	True	NM_203422,NM_012202	chr11,chr11	-,+	LRRN4CL,GNG3	-2357,14953
chr9:12779432-12781263	chr9	+	12779710	12780612	True	NM_203403,NM_003829	chr9,chr9	+,-	C9orf150,MPDZ	-4749,469803
chr5:176779171-176779587	chr5	+	176779233	176779512	True	NM_006816,NM_006480	chr5,chr5	-,+	LMAN2,RGS14	-348,5331
chrX:71352109-71353880	chrX	+	71352226	71353584	True	NM_207422,NM_001024455	chrX,chrX	+,-	FLJ44635,RGAG4	10449,-475
chr4:145568180-145568473	chr4	+	145568214	145568510	True	NR_037595,NM_022475	chr4,chr4	-,+	LOC646576,HHIP	-1043,-1120
chr19:3604354-3604802	chr19	+	3604396	3604814	True	NM_001060,NM_133261,NM_201636	chr19,chr19,chr19	-,+,-	TBXA2R,GIPC3,TBXA2R	2067,-18878,2067
chr3:51428746-51428971	chr3	+	51428847	51428997	True	NM_001171904,NM_006010,NM_013286	chr3,chr3,chr3	-,+,+	VPRBP,MANF,RBM15B	105071,-6206,-199
chr1:211500569-211502519	chr1	+	211500740	211502208	True	NM_001033910,NM_001164688,NM_004619	chr1,chr1,chr1	+,-,+	TRAF5,RD3,TRAF5	-643,164101,-834
chr11:61123183-61123418	chr11	+	61123192	61123292	True	NM_153611,NM_016464,NM_001161452,NM_001161454,NR_028473	chr11,chr11,chr11,chr11,chr11	-,+,-,-,+	CYBASC3,TMEM138,CYBASC3,CYBASC3,TMEM138	6513,6180,1119,6513,6180
chr5:151140066-151140434	chr5	+	151140222	151140282	True	NM_005754,NM_004045	chr5,chr5	+,-	G3BP1,ATOX1	11193,-2012
chr6:105404024-105404234	chr6	+	105404146	105404234	True	NM_001004317,NM_020771	chr6,chr6	+,-	LIN28B,HACE1	688,-96352
chr7:23572518-23573285	chr7	+	23572583	23573077	True	NM_013293,NR_026676	chr7,chr7	-,+	TRA2A,RPS2P32	-927,-42628
chr13:33000132-33001059	chr13	+	33000277	33001025	True	NM_000059,NM_052818,NM_001079691	chr13,chr13,chr13	+,-,-	BRCA2,N4BP2L1,N4BP2L1	-110711,1340,1340
chr3:38354252-38354496	chr3	+	38354255	38354421	True	NM_004803,NR_028389	chr3,chr3	+,-	SLC22A14,LOC100128640	-6861,141940
chr15:74903596-74903828	chr15	+	74903600	74903856	True	NM_001130028,NM_003992,NM_001142443	chr15,chr15,chr15	+,+,-	CLK3,CLK3,EDC3	3478,-2938,84580
chr2:20252401-20253288	chr2	+	20252542	20253120	True	NM_014713,NR_033875	chr2,chr2	-,+	LAPTM4A,FLJ12334	-753,-183978
chr5:177633153-177633807	chr5	+	177633193	177633689	True	NR_003281,NM_031266,NM_004499	chr5,chr5,chr5	-,+,+	GMCL1L,HNRNPAB,HNRNPAB	-18760,-1736,-1736
chr11:126150719-126150996	chr11	+	126150741	126150889	True	NM_148910,NM_003139,NM_001039661	chr11,chr11,chr11	+,-,+	TIRAP,SRPR,TIRAP	2092,-11864,2092
chr9:141044731-141044972	chr9	+	141044747	141044915	True	NM_032937,NR_027156	chr9,chr9	-,+	C9orf37,TUBBP5	-531439,-233
chr7:76139140-76139346	chr7	+	76139216	76139386	True	NM_030570,NR_003262,NM_182684	chr7,chr7,chr7	+,-,+	UPK3B,FDPSL2A,UPK3B	358,-34899,358
chr12:132569094-132569397	chr12	+	132569200	132569440	True	NM_175066,NR_003290	chr12,chr12	-,+	DDX51,EP400NL	59490,-423
chr11:55652439-55653008	chr11	+	55652441	55652761	True	NM_032681,NM_001001960	chr11,chr11	+,-	SPRYD5,OR5W2	-1719,29357
chrX:49021346-49022038	chrX	+	49021390	49022038	True	NM_002668,NM_006150,NM_001099682,NM_001099681,NM_001099680,NM_024859	chrX,chrX,chrX,chrX,chrX,chrX	+,-,+,+,+,+	PLP2,PRICKLE3,MAGIX,MAGIX,MAGIX,MAGIX	6145,20788,-2260,-2260,-1171,-2260
chr14:24618465-24619907	chr14	+	24618865	24619879	True	NM_017999,NM_016049,NM_002818	chr14,chr14,chr14	+,-,-	RNF31,FAM158A,PSME2	-2264,-8068,-3010
chr10:135148837-135149061	chr10	+	135148922	135148988	True	NM_001145201,NM_015722	chr10,chr10	+,-	PRAP1,CALY	11855,1537
chr9:99181708-99183313	chr9	+	99181827	99183150	True	NM_153695,NM_014282	chr9,chr9	-,+	ZNF367,HABP4	-1158,29263
chr5:134183277-134183685	chr5	+	134183310	134183734	True	NM_152409,NM_002653,NM_001135586	chr5,chr5,chr5	+,-,+	C5orf24,PITX1,C5orf24	-1999,186280,-1711
chr7:151571684-151572410	chr7	+	151572075	151572427	True	NM_145292,NM_016203	chr7,chr7	+,-	GALNTL5,PRKAG2	81036,1939
chr10:102300776-102301415	chr10	+	102301155	102301465	True	NM_017902,NM_005004	chr10,chr10	+,-	HIF1AN,NDUFB8	-5573,-11519
chr16:86775345-86775908	chr16	+	86775346	86775617	True	NM_005250,NR_027490	chr16,chr16	+,-	FOXL1,MTHFSD	-163282,-186505
chr5:145215627-145216047	chr5	+	145215665	145215955	True	NM_205846,NM_182960,NM_138492,NM_152550	chr5,chr5,chr5,chr5	-,-,-,+	PRELID2,PRELID2,PRELID2,SH3RF2	-798,-798,-766,100170
chr11:119292319-119292704	chr11	+	119292343	119292723	True	NM_006288,NR_034160	chr11,chr11	-,+	THY1,LOC100499227	1573,-39907
chr5:134208268-134209210	chr5	+	134208411	134209194	True	NM_002653,NM_024715	chr5,chr5	-,+	PITX1,TXNDC15	160820,265
chr5:52286119-52286639	chr5	+	52286211	52286664	True	NM_002203,NM_004531	chr5,chr5	+,-	ITGA2,MOCS2	-1106,118711
chr20:25177411-25177653	chr20	+	25177410	25177676	True	NR_027091,NM_001114089,NM_001247	chr20,chr20,chr20	-,+,+	LOC284798,ENTPD6,ENTPD6	-47984,-1124,-1124
chr3:20048657-20049182	chr3	+	20048816	20048967	True	NM_003884,NR_027694	chr3,chr3	+,-	KAT2B,C3orf48	32556,4852
chr11:820680-821223	chr11	+	820733	821249	True	NM_145887,NR_002585,NM_020376,NM_173584	chr11,chr11,chr11,chr11	-,+,+,+	LRDD,SNORA52,PNPLA2,EFCAB4A	-15483,-9103,-1883,6335
chr1:120839388-120839671	chr1	+	120839415	120839686	True	NM_001004340,NM_001100910	chr1,chr1	-,+	FCGR1B,FAM72B	96311,-463
chr1:120839388-120839671	chr1	+	206138887	206139158	False	NM_001123168,NM_001007544	chr1,chr1	+,-	FAM72A,C1orf186	-29,149542
chr1:120839388-120839671	chr1	-	143912441	143912712	False	NM_207418,NR_034178	chr1,chr1	-,+	FAM72D,SRGAP2P2	483,3035
chr8:73998690-73999456	chr8	+	73998715	73999474	True	NM_153225,NM_017489	chr8,chr8	-,+	C8orf84,TERF1	6083,-77670
chr3:45633063-45634795	chr3	+	45633193	45634754	True	NM_014240,NR_033947	chr3,chr3	+,-	LIMD1,LOC644714	1568,95670
chr8:133497310-133499063	chr8	+	133497469	133498772	True	NM_004519,NM_198513	chr8,chr8	-,+	KCNQ3,PHF20L1	-4465,288831
chr6:26098593-26099636	chr6	+	26098766	26098997	True	NM_003542,NM_005323	chr6,chr6	+,-	HIST1H4C,HIST1H1T	5178,9418
chr17:7019031-7019395	chr17	+	7019206	7019382	True	NM_080913,NM_080912,NM_001181,NM_080914,NM_001201352,NM_201566	chr17,chr17,chr17,chr17,chr17,chr17	-,-,-,-,-,+	ASGR2,ASGR2,ASGR2,ASGR2,ASGR2,SLC16A13	-1076,-1076,-1076,-1577,-1076,-79863
chr10:22634852-22635266	chr10	+	22634984	22635282	True	NM_172242,NM_012443,NR_036533	chr10,chr10,chr10	+,+,-	SPAG6,SPAG6,LOC100499489	-636,-636,91626
chrX:67643863-67645408	chrX	+	67644241	67645428	True	NM_002547,NM_001195214	chrX,chrX	-,+	OPHN1,YIPF6	7921,73195
chr8:37371926-37372257	chr8	+	37372038	37372294	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	181006,233320
chr11:64053740-64053970	chr11	+	64053920	64054010	True	NM_020155,NM_001177358,NM_001170880,NM_004322,NM_001170881,NM_001170726,NM_033310,NM_032989	chr11,chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,-,+,+,+,-	GPR137,GPR137,GPR137,BAD,GPR137,GPR137,KCNK4,BAD	-389,-1688,-389,-1744,-1686,-2160,4782,-1744
chr19:36024492-36024692	chr19	+	36024558	36024618	True	NM_001166035,NM_001166034,NM_014364,NM_198538	chr19,chr19,chr19,chr19	-,-,+,-	SBSN,SBSN,GAPDHS,SBSN	-5305,-5305,-295,-5305
chr21:33750109-33751049	chr21	+	33750308	33750858	True	NR_002996,NR_026845	chr21,chr21	-,+	SNORA80,C21orf119	-677,14583
chr1:220961272-220961592	chr1	+	220961406	220961620	True	NM_022746,NM_012414	chr1,chr1	+,-	MOSC1,RAB3GAP2	-1425,-515563
chr2:97406903-97407416	chr2	+	97406926	97407447	True	NM_020184,NR_024518,NR_024519,NM_001142292,NR_024521,NR_024520,NM_030805	chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,-,-,-,-,-,-	CNNM4,LMAN2L,LMAN2L,LMAN2L,LMAN2L,LMAN2L,LMAN2L	19191,-1113,-1113,-1113,-1113,-1113,-1113
chr6:117587147-117587450	chr6	+	117587186	117587484	True	NM_002944,NM_182645,NM_153453	chr6,chr6,chr6	-,+,+	ROS1,VGLL2,VGLL2	159584,-500,-516
chr8:67679373-67680958	chr8	+	67679645	67680654	True	NR_002734,NM_013257,NM_170709	chr8,chr8,chr8	-,+,+	PTTG3P,SGK3,SGK3	69,6761,6761
chr13:28024603-28025127	chr13	+	28024658	28025088	True	NM_002097,NM_152912,NM_001166261,NM_001166262,NM_001166263	chr13,chr13,chr13,chr13,chr13	+,-,-,-,-	GTF3A,MTIF3,MTIF3,MTIF3,MTIF3	-26028,-41,-324,-332,-41
chr18:61634357-61636017	chr18	+	61634773	61636045	True	NM_198833,NR_027245,NM_002640,NM_001031848	chr18,chr18,chr18,chr18	+,-,+,+	SERPINB8,C18orf20,SERPINB8,SERPINB8	1217,180265,1217,1217
chr8:17557690-17559351	chr8	+	17558085	17558952	True	NM_020749,NM_006207	chr8,chr8	-,+	MTUS1,PDGFRL	-2839,-124201
chr11:116640695-116641301	chr11	+	116640874	116641181	True	NM_001159736,NM_032725,NM_000040	chr11,chr11,chr11	-,-,+	BUD13,BUD13,APOC3	2584,2584,59442
chr19:55317437-55317901	chr19	+	55317528	55317920	True	NM_001080770,NM_001080772,NM_001127255,NM_013289,NM_002255	chr19,chr19,chr19,chr19,chr19	+,+,-,+,+	KIR2DL4,KIR2DL4,NLRP7,KIR3DL1,KIR2DL4	-2512,-2512,141003,9972,-2512
chr8:94927100-94928693	chr8	+	94927224	94928539	True	NM_001161780,NM_001161779,NM_001161778,NM_001161781,NM_203390,NM_018444	chr8,chr8,chr8,chr8,chr8,chr8	+,+,+,+,-,+	PDP1,PDP1,PDP1,PDP1,RBM12B,PDP1	622,635,1452,739,-174000,543
chr6:118227610-118228058	chr6	+	118227636	118228058	True	NM_020399,NM_001029858	chr6,chr6	-,+	GOPC,SLC35F1	-303931,630
chr9:103792455-103792970	chr9	+	103792548	103793006	True	NM_207299,NM_001127610	chr9,chr9	+,-	LPPR1,BAAT	-1569,352845
chr17:10100597-10101098	chr17	+	10100597	10101101	True	NM_201433,NM_004246	chr17,chr17	-,+	GAS7,GLP2R	817,-371272
chr20:23132085-23132861	chr20	+	23132215	23132845	True	NR_034149,NM_001052	chr20,chr20	-,+	LOC200261,SSTR4	-18942,-116209
chr1:115231814-115232360	chr1	+	115231843	115232041	True	NM_000036,NM_003176,NM_001172626	chr1,chr1,chr1	-,+,-	AMPD1,SYCP1,AMPD1	6248,165413,6248
chr9:39787638-39788437	chr9	+	39787869	39788481	True	NR_003528,NM_001085452	chr9,chr9	-,+	LOC653501,FAM75A1	-323343,96493
chr9:39787638-39788437	chr9	+	39258624	39258674	False	NM_033655,NM_001085452	chr9,chr9	-,+	CNTNAP3,FAM75A1	29676,97024
chr16:4352561-4352856	chr16	+	4352669	4352729	True	NM_032575,NM_003223	chr16,chr16	+,-	GLIS2,TFAP4	29495,-29668
chr7:64743554-64744252	chr7	+	64743611	64743935	True	NM_001007253,NM_007139	chr7,chr7	-,+	ERV3,ZNF92	-276487,94832
chr3:118730165-118731660	chr3	+	118730283	118731652	True	NM_152539,NM_001015887	chr3,chr3	+,-	C3orf30,IGSF11	133344,22081
chr4:24981493-24982767	chr4	+	24981503	24982694	True	NR_037934,NM_173463	chr4,chr4	+,-	LOC285540,CCDC149	179599,145
chr10:12390100-12390597	chr10	+	12390114	12390639	True	NM_014142,NM_153498,NM_020397	chr10,chr10,chr10	-,+,+	NUDT5,CAMK1D,CAMK1D	-151971,943,943
chr3:99367501-99369369	chr3	+	99367620	99369178	True	NM_020351,NM_014890	chr3,chr3	+,-	COL8A1,FILIP1L	-10219,225933
chr12:56626107-56626901	chr12	+	56626294	56626678	True	NM_173596,NM_024068,NM_194359,NM_001135195	chr12,chr12,chr12,chr12	+,+,-,+	SLC39A5,OBFC2B,RNF41,SLC39A5	-2532,-8227,-10559,-1851
chr2:136874430-136874779	chr2	+	136874562	136874685	True	NM_001008540,NM_003467,NM_014607	chr2,chr2,chr2	-,-,+	CXCR4,CXCR4,UBXN4	-749,1090,-375424
chr8:91043500-91044984	chr8	+	91043846	91044970	True	NM_002485,NM_001359	chr8,chr8	-,+	NBN,DECR1	-46947,-30318
chr2:70518826-70519170	chr2	+	70518833	70519037	True	NM_016297,NM_003096	chr2,chr2	+,-	PCYOX1,SNRPG	-33659,1891
chr19:35721723-35722579	chr19	+	35721937	35722461	True	NM_152481,NM_015925	chr19,chr19	-,+	FAM187B,LSR	-2309,17097
chr15:63794903-63795243	chr15	+	63794911	63795279	True	NR_034080,NM_006537	chr15,chr15	-,+	LOC100130855,USP3	97797,1530
chr8:141640083-141641360	chr8	+	141640174	141641229	True	NR_023360,NM_001164623,NM_012154	chr8,chr8,chr8	+,-,-	CHRAC1,EIF2C2,EIF2C2	-118810,4469,4469
chr8:119633751-119634204	chr8	+	119633764	119634176	True	NM_207506,NM_006438,NM_001101676	chr8,chr8,chr8	-,+,-	SAMD12,COLEC10,SAMD12	58,445247,58
chr10:28856960-28857350	chr10	+	28856961	28857200	True	NR_033805,NM_100486	chr10,chr10	-,+	LOC220906,WAC	-35678,-34594
chr5:176899098-176899609	chr5	+	176899103	176899415	True	NM_001174102,NM_080881,NM_004395	chr5,chr5,chr5	+,-,-	PRR7,DBN1,DBN1	-23828,506,1329
chrX:142110401-142110777	chrX	+	142110506	142110794	True	NM_001009613,NM_001009609	chrX,chrX	+,-	SPANXN4,SPANXN3	2909,494563
chr5:73978105-73979736	chr5	+	73978263	73979601	True	NM_003633,NM_000521	chr5,chr5	-,+	ENC1,HEXB	-41014,1367
chr15:64454311-64454749	chr15	+	64454312	64454766	True	NM_024798,NM_000942	chr15,chr15	+,-	SNX22,PPIB	-10447,638
chr1:1143868-1144239	chr1	+	1143868	1144016	True	NM_004195,NM_148901,NM_148902,NM_003327,NM_080605	chr1,chr1,chr1,chr1,chr1	-,-,-,-,+	TNFRSF18,TNFRSF18,TNFRSF18,TNFRSF4,B3GALT6	-1779,-1779,-1779,5582,23612
chr4:186315334-186317168	chr4	+	186315442	186317080	True	NM_181726,NM_018409	chr4,chr4	+,-	ANKRD37,LRP2BP	759,-15290
chr6:151769238-151770066	chr6	+	151769309	151769928	True	NM_017909,NM_024573	chr6,chr6	-,+	RMND1,C6orf211	3443,3493
chr11:14542692-14543051	chr11	+	14542795	14542870	True	NM_001143937,NM_002786,NM_000922	chr11,chr11,chr11	-,-,+	PSMA1,PSMA1,PDE3B	-804,-804,122398
chr2:220175910-220177049	chr2	+	220176292	220176765	True	NM_001199764,NM_001199763,NM_006736,NM_002846	chr2,chr2,chr2,chr2	-,-,+,-	PTPRN,PTPRN,DNAJB2,PTPRN	-2563,-1997,-32321,-1997
chr6:138971235-138971471	chr6	+	138971254	138971466	True	NM_020464,NR_033896	chr6,chr6	-,+	NHSL1,FLJ46906	-77586,41338
chr7:120652682-120654326	chr7	+	120652752	120654220	True	NM_001105533,NM_012338	chr7,chr7	+,-	C7orf58,TSPAN12	-23369,-154575
chr11:69287818-69289647	chr11	+	69288039	69289454	True	NM_153451,NM_053056	chr11,chr11	-,+	ORAOV1,CCND1	200762,166418
chr6:25284244-25284685	chr6	+	25284284	25284586	True	NM_017640,NM_001173977,NR_027626	chr6,chr6,chr6	+,+,-	LRRC16A,LRRC16A,CMAH	-4692,-4692,-145664
chr17:60483978-60484397	chr17	+	60484077	60484444	True	NR_027486,NM_181725	chr17,chr17	-,+	TBC1D3P2,METTL2A	-131061,16801
chr17:30437794-30439662	chr17	+	30438017	30439591	True	NM_001033566,NR_002222	chr17,chr17	+,-	RHOT1,ARGFXP2	29881,39049
chr17:30437794-30439662	chr17	+	80573573	80573625	False	NM_019613,NM_004514	chr17,chr17	-,+	WDR45L,FOXK2	32838,-96032
chr5:179219109-179219533	chr5	+	179219139	179219565	True	NR_031598,NM_145867	chr5,chr5	-,+	MIR1229,LTC4S	5831,1420
chr10:11048157-11049389	chr10	+	11048248	11048895	True	NR_024411,NM_001025077	chr10,chr10	-,+	LOC254312,CELF2	-54122,-1051
chr1:92347316-92348156	chr1	+	92347626	92347698	True	NM_207189,NM_003243,NR_036634,NM_001195683	chr1,chr1,chr1,chr1	+,-,-,-	BRDT,TGFBR3,TGFBR3,TGFBR3	67229,4188,4188,4188
chr9:138369380-138369761	chr9	+	138369539	138369614	True	NM_014811,NM_001048265	chr9,chr9	+,-	KIAA0649,C9orf116	2033,22206
chr2:232825342-232826076	chr2	+	232825525	232826071	True	NM_024409,NM_152383	chr2,chr2	-,+	NPPC,DIS3L2	-34566,221
chr19:36000560-36000866	chr19	+	36000587	36000721	True	NM_001035516,NM_001190348,NM_001126059,NM_001126058,NM_001126057,NM_001190347,NM_001190349,NM_001126056,NR_033746,NM_014364,NM_033317	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,-,-,-,+,-	DMKN,DMKN,DMKN,DMKN,DMKN,DMKN,DMKN,DMKN,DMKN,GAPDHS,DMKN	-7774,3889,720,3889,3889,3889,3889,3889,741,23592,3889
chr4:103263511-103265168	chr4	+	103263852	103265186	True	NM_001165412,NM_022154,NM_001135147,NM_001135146	chr4,chr4,chr4,chr4	+,-,-,-	NFKB1,SLC39A8,SLC39A8,SLC39A8	157299,1212,1274,1519
chr10:94822068-94822391	chr10	+	94822119	94822433	True	NM_013451,NM_183374	chr10,chr10	-,+	MYOF,CYP26C1	419691,-1149
chr14:53198446-53198652	chr14	+	53198450	53198570	True	NM_014584,NM_001130701,NM_145251	chr14,chr14,chr14	-,+,+	ERO1L,STYX,STYX	-36031,-1625,-1625
chr1:7832065-7832668	chr1	+	7832134	7832548	True	NM_006786,NM_004781	chr1,chr1	-,+	UTS2,VAMP3	80606,-857
chr19:18391175-18391680	chr19	+	18391350	18391552	True	NM_001145304,NR_036155,NM_005354,NM_001145305,NM_025249	chr19,chr19,chr19,chr19,chr19	-,+,-,-,-	KIAA1683,MIR3188,JUND,KIAA1683,KIAA1683	-6031,1334,930,-6031,-6031
chr17:1530854-1531187	chr17	+	1530873	1531067	True	NM_001163673,NM_152346	chr17,chr17	+,-	WDR81,SLC43A2	88749,1113
chr16:71523233-71523444	chr16	+	71523272	71523484	True	NM_005769,NM_006961	chr16,chr16	+,-	CHST4,ZNF19	36538,-18
chr3:50230024-50230235	chr3	+	50230068	50230284	True	NM_000172,NM_006764,NM_144499	chr3,chr3,chr3	+,-,+	GNAT1,IFRD2,GNAT1	-1076,99792,-1076
chr15:37002704-37004109	chr15	+	37002814	37004147	True	NR_027320,NM_032499	chr15,chr15	-,+	CSNK1A1P1,C15orf41	106617,-70066
chr2:209009405-209010057	chr2	+	209009599	209009908	True	NM_005210,NM_001178000	chr2,chr2	-,+	CRYGB,PIKFYVE	1028,121082
chr17:25321344-25321555	chr17	+	25321389	25321491	True	NM_015626,NM_000625	chr17,chr17	+,-	WSB1,NOS2	299614,806114
chr17:25321344-25321555	chr17	+	21339851	21339906	False	NM_001113434,NM_001194958	chr17,chr17	-,+	C17orf51,KCNJ18	115086,-31457
chr12:109577463-109577773	chr12	+	109577548	109577772	True	NM_001093,NM_001205180	chr12,chr12	+,-	ACACB,ALKBH2	-397,-46255
chr20:42813984-42814883	chr20	+	42814493	42814895	True	NM_024034,NM_175913,NM_020433	chr20,chr20,chr20	+,-,-	GDAP1L1,JPH2,JPH2	61012,1373,1373
chr2:29294525-29295564	chr2	+	29294585	29295601	True	NM_001029883,NM_024692	chr2,chr2	-,+	C2orf71,CLIP4	1576,42706
chr1:203196341-203196947	chr1	+	203196505	203196877	True	NM_003465,NM_006763	chr1,chr1	-,+	CHIT1,BTG2	2039,77786
chr14:77563309-77564124	chr14	+	77563375	77564003	True	NM_174976,NM_033426	chr14,chr14	-,+	ZDHHC22,KIAA1737	44181,574
chr5:92916247-92916980	chr5	+	92916465	92916931	True	NR_021490,NR_021491,NR_015369,NM_005654	chr5,chr5,chr5,chr5	-,-,-,+	FLJ42709,FLJ42709,FLJ42709,NR2F1	122,72,-9966,2111
chr13:27750579-27750843	chr13	+	27750631	27750863	True	NM_000982,NM_182488	chr13,chr13	+,-	RPL21,USP12	74828,-4598
chr9:107690878-107692273	chr9	+	107690897	107691942	True	NR_024011,NM_005502	chr9,chr9	+,-	LOC286367,ABCA1	-154315,-370
chr15:83944732-83945917	chr15	+	83944743	83945675	True	NM_023003,NM_001717	chr15,chr15	+,-	TM6SF1,BNC1	-168471,7849
chr17:19315079-19315343	chr17	+	19315159	19315381	True	NM_002404,NM_007148	chr17,chr17	-,+	MFAP4,RNF112	-24627,-719
chr6:32490020-32490249	chr6	+	32490047	32490241	True	NM_002125,NM_019111	chr6,chr6	-,+	HLA-DRB5,HLA-DRA	7815,-82479
chr19:7912752-7913202	chr19	+	7912755	7913059	True	NM_001159944,NM_001190467	chr19,chr19	+,-	EVI5L,FLJ22184	-1420,26317
chrX:99905257-99905795	chrX	+	99905272	99905828	True	NM_003270,NM_014467	chrX,chrX	-,+	TSPAN6,SRPX2	-13478,-6160
chrX:114472628-114473403	chrX	+	114472778	114473438	True	NM_001145346,NM_020871	chrX,chrX	+,-	RBMXL3,LRCH2	-48875,-4143
chr17:34344868-34346431	chr17	+	34345139	34346415	True	NM_002988,NM_005064,NM_145898	chr17,chr17,chr17	+,-,-	CCL18,CCL23,CCL23	45227,-134,-134
chrX:104464380-104464697	chrX	+	104464479	104464733	True	NM_031274,NM_198465	chrX,chrX	-,+	TEX13A,NRK	675,601802
chr11:76475486-76476714	chr11	+	76475506	76476538	True	NM_015516,NR_024042	chr11,chr11	+,-	TSKU,GUCY2E	17746,-42673
chr1:161377493-161378010	chr1	+	161377495	161377875	True	NM_001013625,NM_003001	chr1,chr1	-,+	C1orf192,SDHC	-39831,-93381
chr21:46422947-46423225	chr21	+	46422958	46423116	True	NR_033840,NR_024089,NM_058190	chr21,chr21,chr21	-,-,+	NCRNA00163,NCRNA00162,C21orf70	-8957,1576,-63054
chr1:2345489-2345994	chr1	+	2345507	2346001	True	NM_002617,NM_007033,NM_153818	chr1,chr1,chr1	-,+,-	PEX10,RER1,PEX10	-1497,-22344,-1497
chr17:79920374-79920596	chr17	+	79920415	79920501	True	NM_178493,NM_024083	chr17,chr17	-,+	NOTUM,ASPSCR1	-1358,14924
chr10:127511754-127512076	chr10	+	127511803	127511889	True	NM_000375,NM_016567,NM_078468,NM_078469	chr10,chr10,chr10,chr10	-,+,+,+	UROS,BCCIP,BCCIP,BCCIP	2,214,214,214
chr14:100627272-100628126	chr14	+	100627335	100628012	True	NM_003403,NM_206918	chr14,chr14	+,-	YY1,DEGS2	77089,-1323
chr5:176236421-176236707	chr5	+	176236531	176236667	True	NM_133369,NM_002115	chr5,chr5	+,-	UNC5A,HK3	892,89716
chr1:43368098-43368880	chr1	+	43368204	43368900	True	NR_033967,NM_015911,NM_006516	chr1,chr1,chr1	+,+,-	FLJ32224,ZNF691,SLC2A1	55819,-55982,55997
chr13:25535613-25536299	chr13	+	25535848	25536342	True	NR_026730,NM_030979	chr13,chr13	-,+	TPTE2P1,PABPC3	6315,133933
chr4:168126885-168127397	chr4	+	168127138	168127206	True	NM_001204353,NM_007193	chr4,chr4	-,+	SPOCK3,ANXA10	28425,886481
chr12:119740838-119741505	chr12	+	119740891	119741273	True	NR_024246,NM_178499	chr12,chr12	-,+	LOC144742,CCDC60	8,31243
chr7:1200187-1200566	chr7	+	1200235	1200589	True	NM_182491,NM_001080461	chr7,chr7	-,+	ZFAND2A,UNCX	-380,72064
chr17:18011861-18013076	chr17	+	18011931	18012803	True	NM_016239,NM_145691	chr17,chr17	+,-	MYO15A,ATPAF2	25,-69451
chr7:76257711-76258543	chr7	+	76257899	76258575	True	NR_029411,NM_152992,NM_012230	chr7,chr7,chr7	+,-,-	LOC100133091,POMZP3,POMZP3	-79292,-1279,-1279
chr7:76257711-76258543	chr7	-	72393384	72393434	False	NR_033323,NM_172020	chr7,chr7	-,+	NSUN5P2,POM121	31918,-43499
chr7:76257711-76258543	chr7	+	75073323	75074000	False	NM_001099415,NR_033322	chr7,chr7	-,+	POM121C,NSUN5P1	41618,-33750
chr5:64045226-64047070	chr5	+	64045663	64047110	True	NM_173829,NM_005869	chr5,chr5	-,+	SREK1IP1,CWC27	17439,17644
chr4:3549202-3549555	chr4	+	3549207	3549519	True	NM_002337,NM_173660	chr4,chr4	-,+	LRPAP1,DOK7	-14983,-84225
chr6:36561556-36561914	chr6	+	36561590	36561854	True	NM_003017,NR_037491,NR_036610	chr6,chr6,chr6	+,-,+	SRSF3,MIR3925,SRSF3	235,28485,235
chr1:29504705-29505014	chr1	+	29504707	29504820	True	NM_005626,NM_001195001	chr1,chr1	-,+	SRSF4,PTPRU	3882,58207
chr15:63335202-63335443	chr15	+	63335289	63335427	True	NM_001018020,NM_001018007,NM_001018004,NM_001018005,NM_001018008,NM_000366,NM_001018006,NM_015920	chr15,chr15,chr15,chr15,chr15,chr15,chr15,chr15	+,+,+,+,+,+,+,-	TPM1,TPM1,TPM1,TPM1,TPM1,TPM1,TPM1,RPS27L	-502,-502,-502,-502,5208,-502,-502,114364
chr1:55011305-55012009	chr1	+	55011395	55011911	True	NM_015547,NM_147161,NM_176782	chr1,chr1,chr1	+,+,-	ACOT11,ACOT11,FAM151A	1895,1895,77339
chr5:133513687-133514085	chr5	+	133513701	133514083	True	NM_006930,NR_037434,NM_170679	chr5,chr5,chr5	-,+,-	SKP1,MIR3661,SKP1	-977,47364,-977
chr10:28036087-28036405	chr10	+	28036090	28036439	True	NM_021252,NM_173576	chr10,chr10	+,-	RAB18,MKX	-242899,-1312
chr22:38003222-38003737	chr22	+	38003327	38003634	True	NM_001172688,NM_013365,NM_001172687,NM_006498,NM_001001561,NM_001001560	chr22,chr22,chr22,chr22,chr22,chr22	+,+,+,-,+,+	GGA1,GGA1,GGA1,LGALS2,GGA1,GGA1	1412,846,846,-27303,846,846
chr4:148603620-148604563	chr4	+	148603898	148604598	True	NM_024605,NM_138364	chr4,chr4	+,-	ARHGAP10,PRMT10	48854,732
chr17:39501758-39502725	chr17	+	39501757	39502610	True	NM_030975,NM_004138	chr17,chr17	+,-	KRTAP9-9,KRT33A	-90180,4501
chr12:133289133-133289775	chr12	+	133289413	133289823	True	NM_001170544,NM_001170543,NM_138575,NM_006231	chr12,chr12,chr12,chr12	+,+,+,-	PGAM5,PGAM5,PGAM5,POLE	-2074,-2074,-2074,-25468
chr16:57390744-57391210	chr16	+	57390802	57391060	True	NM_015993,NM_002990	chr16,chr16	-,+	PLLP,CCL22	-72218,1634
chr6:35481273-35482028	chr6	+	35481799	35482071	True	NM_003322,NM_007104	chr6,chr6	-,+	TULP1,RPL10A	-1152,-45676
chr15:45547474-45548696	chr15	+	45547473	45548328	True	NM_138356,NM_004212	chr15,chr15	-,+	SHF,SLC28A2	-54100,-3104
chr16:56677578-56677891	chr16	+	56677592	56677930	True	NR_003658,NR_036677,NM_005947,NM_005946,NM_005950,NR_027781	chr16,chr16,chr16,chr16,chr16,chr16	+,+,+,+,-,+	MT1DP,MT1JP,MT1B,MT1A,MT1G,MT1DP	7,-7992,7880,-5065,24097,-44
chr3:132376864-132377904	chr3	+	132377282	132377835	True	NM_032169,NM_198329,NM_024818	chr3,chr3,chr3	-,+,+	ACAD11,UBA5,UBA5	1201,-4051,1304
chr10:134741518-134741769	chr10	+	134741617	134741723	True	NM_173572,NM_001083909	chr10,chr10	-,+	C10orf93,GPR123	14416,159685
chr5:40904627-40905036	chr5	+	40904626	40905076	True	NM_000587,NM_000997	chr5,chr5	+,-	C7,RPL37	4522,-69239
chr12:6897241-6898111	chr12	+	6897407	6898142	True	NM_000616,NM_001195014,NM_001195017,NM_001195016,NR_026581,NR_036545,NM_001195015	chr12,chr12,chr12,chr12,chr12,chr12,chr12	+,+,+,+,-,+,+	CD4,CD4,CD4,CD4,MLF2,CD4,CD4	495,549,549,549,-34771,549,549
chr20:58543311-58545211	chr20	+	58543705	58545186	True	NM_177980,NM_006242	chr20,chr20	+,-	CDH26,PPP1R3D	-10294,-28353
chr18:55710047-55710847	chr18	+	55710154	55710798	True	NM_001144967,NM_015277,NM_001144964,NM_005603	chr18,chr18,chr18,chr18	+,+,+,-	NEDD4L,NEDD4L,NEDD4L,ATP8B1	820,820,3659,-239827
chrX:44703197-44703806	chrX	+	44703310	44703854	True	NM_022076,NM_173794	chrX,chrX	+,-	DUSP21,FUNDC1	-112,-301089
chr2:20188138-20189206	chr2	+	20188298	20189043	True	NM_001006657,NR_033875,NM_020779	chr2,chr2,chr2	-,+,-	WDR35,FLJ12334,WDR35	892,-119741,892
chr5:180417963-180419832	chr5	+	180418185	180419829	True	NM_197975,NM_152283	chr5,chr5	+,-	BTNL3,ZFP62	-2392,-129899
chrX:114825373-114826381	chrX	+	114825507	114826219	True	NM_001136025,NM_020871,NM_001172335	chrX,chrX,chrX	+,-,+	PLS3,LRCH2,PLS3	1599,-356872,1599
chr12:53441489-53441703	chr12	+	53441495	53441587	True	NM_198316,NM_015319,NR_033854,NM_170754	chr12,chr12,chr12,chr12	+,+,-,+	TENC1,TENC1,LOC283335,TENC1	-736,1145,6685,2247
chr1:21670998-21671224	chr1	+	21671142	21671204	True	NM_032264,NM_001113348	chr1,chr1	+,-	NBPF3,ECE1	95426,880
chr6:167656014-167656958	chr6	+	167656330	167656830	True	NM_005299,NM_001143947	chr6,chr6	-,+	GPR31,UNC93A	-85011,47972
chr9:127534637-127536568	chr9	+	127534885	127536314	True	NM_001489,NM_033334,NM_182487	chr9,chr9,chr9	-,-,+	NR6A1,NR6A1,OLFML2A	-1309,-1309,3122
chr7:120498217-120498572	chr7	+	120498304	120498582	True	NM_198267,NM_012338	chr7,chr7	+,-	ING3,TSPAN12	92234,-127
chr3:184019047-184020499	chr3	+	184019205	184020380	True	NM_033259,NM_002808	chr3,chr3	-,+	CAMK2N2,PSMD2	-39954,-2247
chr6:167575167-167576214	chr6	+	167575174	167576242	True	NM_005299,NM_001145121	chr6,chr6	-,+	GPR31,TCP10L2	-3855,7838
chr7:20899016-20899467	chr7	+	20899015	20899265	True	NM_198956,NR_026673	chr7,chr7	-,+	SP8,RPL23P8	-72507,-32149
chr10:7705773-7707706	chr10	+	7705825	7707599	True	NM_002216,NM_001001851,NM_030569	chr10,chr10,chr10	+,-,-	ITIH2,ITIH5,ITIH5	37636,1412,1412
chr20:62198958-62199256	chr20	+	62199071	62199291	True	NM_033405,NM_024059,NM_001037335	chr20,chr20,chr20	-,+,-	PRIC285,C20orf195,PRIC285	16,-14749,6351
chr1:68855786-68856760	chr1	+	68856549	68856611	True	NM_000329,NM_001924	chr1,chr1	-,+	RPE65,GADD45A	59083,-705741
chr10:63662093-63662764	chr10	+	63662093	63662796	True	NM_032199,NM_145307	chr10,chr10	+,-	ARID5B,RTKN2	-1131,365720
chr11:133934107-133934391	chr11	+	133934166	133934438	True	NM_014987,NM_032801	chr11,chr11	-,+	IGSF9B,JAM3	-107286,4381
chr13:111263846-111264635	chr13	+	111263894	111264650	True	NM_017817,NM_018210	chr13,chr13	-,+	RAB20,CARKD	-49823,3357
chr11:71775733-71777066	chr11	+	71776033	71777074	True	NM_001145307,NR_036123	chr11,chr11	+,-	LRTOMT,MIR3165	14302,6324
chr7:72740332-72740883	chr7	+	72740496	72740576	True	NM_001135211,NM_003602,NM_178125	chr7,chr7,chr7	+,+,-	FKBP6,FKBP6,TRIM50	1578,1723,1561
chr6:159421250-159422554	chr6	+	159421523	159422571	True	NM_031924,NM_001195032	chr6,chr6	-,+	RSPH3,C6orf99	-325,-111958
chr21:34775043-34775436	chr21	+	34775332	34775400	True	NM_005534,NM_006134	chr21,chr21	+,-	IFNGR2,TMEM50B	-181,76931
chr19:14528292-14528532	chr19	+	14528439	14528503	True	NM_001204057,NM_005804,NM_002741	chr19,chr19,chr19	-,-,+	DDX39A,DDX39A,PKN1	1457,1746,15662
chr17:45971772-45972164	chr17	+	45971837	45972208	True	NM_003110,NM_199262	chr17,chr17	+,-	SP2,SP6	1307,-38597
chr19:45002703-45003337	chr19	+	45002943	45003349	True	NM_001205280,NM_013256	chr19,chr19	+,-	LOC147710,ZNF180	113590,1275
chr10:135124019-135124603	chr10	+	135124207	135124483	True	NM_006659,NM_145806	chr10,chr10	-,+	TUBGCP2,ZNF511	-1563,-1843
chr12:6602279-6602479	chr12	+	6602365	6602429	True	NM_016497,NM_014865	chr12,chr12	-,+	MRPL51,NCAPD2	92,868
chr14:103759708-103760308	chr14	+	103759837	103760295	True	NR_033938,NM_001969	chr14,chr14	-,+	LOC100131366,EIF5	-104472,40197
chr19:39806028-39807401	chr19	+	39806133	39807333	True	NM_172140,NM_020862	chr19,chr19	+,-	IL29,LRFN1	-19219,-157
chr10:47088170-47088388	chr10	+	47088175	47088389	True	NR_003277,NM_005972	chr10,chr10	-,+	LOC728643,PPYR1	45497,-4692
chr16:58426735-58427466	chr16	+	58426790	58427314	True	NM_001126130,NM_001126129,NM_022770,NM_001080492	chr16,chr16,chr16,chr16	+,+,+,-	GINS3,GINS3,GINS3,PRSS54	-543,-543,-543,-97839
chr17:27574526-27574988	chr17	+	27574525	27574843	True	NM_005208,NM_020772	chr17,chr17	+,-	CRYBA1,NUFIP2	-709,46373
chr17:36825701-36825989	chr17	+	36825792	36825958	True	NM_005937,NM_001130677	chr17,chr17	+,-	MLLT6,C17orf96	35914,5279
chrX:13738865-13739619	chrX	+	13739420	13739662	True	NM_001011658,NM_003611	chrX,chrX	-,+	TRAPPC2,OFD1	13142,13169
chr2:119694900-119695124	chr2	+	119694925	119695024	True	NM_001426,NM_006770	chr2,chr2	-,+	EN1,MARCO	-89166,4720
chr1:12908223-12908481	chr1	+	12908237	12908487	True	NM_001013631,NM_023014,NM_001146181	chr1,chr1,chr1	-,+,-	HNRNPCL1,PRAMEF2,LOC649330	141,8453,0
chr2:26986493-26986789	chr2	+	26986514	26986596	True	NM_017877,NM_001029881	chr2,chr2	+,-	C2orf18,CIB4	545,-122303
chr10:101946147-101946722	chr10	+	101946152	101946637	True	NM_006459,NM_005063,NM_001100626	chr10,chr10,chr10	-,+,-	ERLIN1,SCD,ERLIN1	-418,160134,-338
chr2:37196213-37196860	chr2	+	37196313	37196725	True	NM_174931,NM_003162	chr2,chr2	+,-	CCDC75,STRN	114868,-2698
chr17:35293522-35293729	chr17	+	35293558	35293666	True	NM_198837,NM_005568	chr17,chr17	-,+	ACACA,LHX1	363076,1105
chr1:167190889-167191142	chr1	+	167190933	167191017	True	NR_037163,NM_001198786,NM_002697,NM_005814	chr1,chr1,chr1,chr1	+,+,+,-	POU2F1,POU2F1,POU2F1,GPA33	-861,-918,-918,-131065
chr4:84461232-84461933	chr4	+	84461357	84461830	True	NM_032717,NM_139076	chr4,chr4	+,-	AGPAT9,FAM175A	-3758,-55067
chr1:109421869-109422176	chr1	+	109421868	109422126	True	NM_013296,NM_152763	chr1,chr1	+,-	GPSM2,AKNAD1	-2319,-22152
chr1:3609190-3609396	chr1	+	3609195	3609405	True	NM_001126242,NM_001204189,NM_001126240,NM_001126241,NM_001204192,NM_001204191,NM_001204190,NM_017818	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,+,+,-	TP73,TP73,TP73,TP73,TP73,TP73,TP73,WDR8	-2010,-2010,-2010,-2010,5204,-2010,-2010,-42524
chr22:23889968-23890464	chr22	+	23890121	23890413	True	NM_153615,NM_020070	chr22,chr22	+,-	RGL4,IGLL1	142634,32132
chr1:152854138-152854740	chr1	+	152854292	152854785	True	NM_178351,NM_030663	chr1,chr1	-,+	LCE1C,SMCP	-75185,-3545
chr3:155572944-155573220	chr3	+	155573139	155573203	True	NM_001190992,NM_004733,NM_003875	chr3,chr3,chr3	-,-,+	SLC33A1,SLC33A1,GMPS	-891,-891,15121
chr10:75174550-75174844	chr10	+	75174611	75174845	True	NM_173348,NM_001156,NM_004034	chr10,chr10,chr10	+,-,-	FAM149B1,ANXA7,ANXA7	-246796,-770,-770
chr3:37494851-37495101	chr3	+	37494978	37495056	True	NM_002207,NM_017724	chr3,chr3	+,-	ITGA9,LRRFIP2	-1216,-277127
chr17:44632373-44633123	chr17_ctg5_hap1	+	1489488	1489861	False	NR_002940,NM_016632	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	LRRC37A4,ARL17A	-8163,24080
chr17:44632373-44633123	chr17_ctg5_hap1	-	197707	198080	False	NM_001113738,NR_027782	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	ARL17A,PLEKHM1	-2044,-14493
chr17:44632373-44633123	chr17_ctg5_hap1	-	415628	416001	False	NM_001039083,NR_002940	chr17_ctg5_hap1,chr17_ctg5_hap1	+,-	ARL17B,LRRC37A4	-24074,8165
chr17:44632373-44633123	chr17	+	44632638	44633011	True	NM_016632,NM_006178	chr17,chr17	-,+	ARL17A,NSF	24134,35026
chr17:44632373-44633123	chr17	+	44414782	44415155	False	NM_001103154,NR_033799	chr17,chr17	-,+	ARL17B,NSFP1	24036,35023
chr10:72440083-72441385	chr10	+	72440311	72441303	True	NM_139155,NM_080722,NM_005041	chr10,chr10,chr10	+,+,-	ADAMTS14,ADAMTS14,PRF1	-7803,-7803,-77780
chr2:161340137-161340727	chr2	+	161340148	161340734	True	NM_002897,NM_133484,NM_016836	chr2,chr2,chr2	-,+,-	RBMS1,TANK,RBMS1	9635,652731,9635
chr7:37888668-37890050	chr7	+	37888715	37890051	True	NM_003014,NM_016616	chr7,chr7	-,+	SFRP4,TXNDC3	66524,-567
chr15:34657804-34658423	chr15	+	34657916	34658418	True	NM_175741,NM_153613	chr15,chr15	+,-	C15orf55,LPCAT4	-19901,1027
chr4:1798068-1798288	chr4	+	1798126	1798234	True	NM_012318,NM_000142,NM_001163213,NM_022965	chr4,chr4,chr4,chr4	-,+,+,+	LETM1,FGFR3,FGFR3,FGFR3	59790,-3138,-3138,-3138
chr12:122063343-122063660	chr12	+	122063546	122063645	True	NM_173855,NM_032790	chr12,chr12	-,+	MORN3,ORAI1	43976,809
chr8:6794367-6794870	chr8	+	6794510	6794917	True	NM_018361,NM_001925	chr8,chr8	+,-	AGPAT5,DEFA4	-228683,920
chr19:56444161-56444549	chr19	+	56444178	56444594	True	NM_176810,NM_176811	chr19,chr19	-,+	NLRP13,NLRP8	-476,14603
chr19:37157289-37157674	chr19	+	37157384	37157658	True	NM_153257,NM_152603	chr19,chr19	-,+	ZNF461,ZNF567	131,22643
chr2:176030847-176032112	chr2	+	176030982	176031966	True	NM_024583,NM_001880,NR_030630	chr2,chr2,chr2	+,-,-	SCRN3,ATF2,MIR933	-770589,981,521
chr19:44317166-44317637	chr19	+	44317232	44317676	True	NM_182573,NM_181845	chr19,chr19	-,+	LYPD5,ZNF283	7182,13796
chr1:11155693-11156131	chr1	+	11155807	11156050	True	NM_007375,NM_002685,NM_001001998	chr1,chr1,chr1	+,-,-	TARDBP,EXOSC10,EXOSC10	-83192,3951,3951
chr7:77520215-77521314	chr7	+	77520710	77521326	True	NM_032936,NM_020432	chr7,chr7	-,+	TMEM60,PHTF2	-92963,-51314
chr11:85955991-85956198	chr11	+	85956097	85956227	True	NM_152991,NM_003797,NM_007166	chr11,chr11,chr11	+,+,-	EED,EED,PICALM	-333,-333,-175989
chr8:95903115-95903607	chr8	+	95903297	95903581	True	NM_057749,NM_017864	chr8,chr8	-,+	CCNE2,INTS8	3951,-67821
chr12:93415591-93416909	chr12	+	93416009	93416759	True	NM_001004330,NM_003566	chr12,chr12	+,-	PLEKHG7,EEA1	-285795,-92902
chr11:134095316-134095530	chr11	+	134095398	134095522	True	NM_015261,NM_052875	chr11,chr11	-,+	NCAPD3,VPS26B	-972,-888
chr15:65064501-65066306	chr15	+	65064619	65066180	True	NM_194272,NR_031674,NM_001195059	chr15,chr15,chr15	-,-,+	RBPMS2,MIR1272,PLEKHO2	1649,-9905,67901
chr17:45332503-45332878	chr17	+	45332684	45332773	True	NM_000212,NM_001256	chr17,chr17	+,-	ITGB3,CDC27	-1532,-66019
chr5:19921562-19922776	chr5	+	19922039	19922824	True	NM_001167667,NR_027027	chr5,chr5	-,+	CDH18,GUSBP1	65584,1536764
chr4:107230560-107231772	chr4	+	107230752	107231756	True	NM_004757,NM_001142415,NM_001142416,NM_033115,NM_001163436,NM_001163437,NM_001163435	chr4,chr4,chr4,chr4,chr4,chr4,chr4	+,+,+,-,-,-,-	AIMP1,AIMP1,AIMP1,TBCK,TBCK,TBCK,TBCK	5096,5010,5907,5717,6155,5717,5717
chr3:48335855-48337363	chr3	+	48335879	48336995	True	NM_005793,NM_016089	chr3,chr3	-,+	NME6,ZNF589	5903,-53341
chr17:7231813-7232253	chr17	+	7231989	7232283	True	NM_001005408,NM_032442,NM_014716	chr17,chr17,chr17	-,-,+	NEURL4,NEURL4,ACAP1	405,405,7564
chr3:133971234-133971658	chr3	+	133971358	133971696	True	NM_002958,NM_001042383,NM_001005861	chr3,chr3,chr3	-,+,-	RYK,CEP63,RYK	-1772,232878,-1772
chr22:36876734-36877501	chr22	+	36876996	36877449	True	NM_012473,NM_145343	chr22,chr22	-,+	TXN2,APOL1	289,-227939
chr10:105836974-105837228	chr10	+	105837029	105837223	True	NM_145247,NM_000494	chr10,chr10	+,-	MEIR5,COL17A1	44592,8465
chr19:14684831-14686140	chr19	+	14685172	14685982	True	NM_207390,NM_004146,NM_001204118	chr19,chr19,chr19	+,-,+	CLEC17A,NDUFB7,CLEC17A	7913,-2283,7913
chr19:47840508-47841185	chr19	+	47840541	47841059	True	NM_001009813,NM_018485	chr19,chr19	-,+	MEIS3,GPR77	81778,-221
chr16:33139616-33139832	chr16	+	33139617	33139741	True	NR_033866,NM_016212	chr16,chr16	-,+	LOC390705,TP53TG3	159011,65238
chr16:33139616-33139832	chr16	+	32198636	32198760	False	NR_002827,NM_003414	chr16,chr16	-,+	HERC2P4,ZNF267	-34762,-313608
chr16:33139616-33139832	chr16	-	32753308	32753432	False	NM_016212	chr16	-	TP53TG3	-65255
chr19:48613526-48613791	chr19	+	48613648	48613840	True	NM_001159323,NM_001159322,NM_022142,NM_003706	chr19,chr19,chr19,chr19	-,-,+,-	PLA2G4C,PLA2G4C,ELSPBP1,PLA2G4C	319,319,-115794,319
chr7:1015540-1016085	chr7	+	1015597	1015833	True	NM_001031617,NM_017781	chr7,chr7	-,+	COX19,CYP2W1	-362,7001
chr1:211291254-211292422	chr1	+	211291327	211292249	True	NM_001136225,NM_002238	chr1,chr1	+,-	RCOR3,KCNH1	140458,15261
chr12:97321209-97322761	chr12	+	97321208	97322315	True	NM_002595,NM_001135175	chr12,chr12	-,+	CDK17,NEDD1	-526842,-20015
chr1:22975418-22976982	chr1	+	22975469	22976790	True	NM_000491,NR_036214,NM_001114101,NM_172369	chr1,chr1,chr1,chr1	+,-,+,+	C1QB,MIR4253,C1QC,C1QC	2891,212979,-5402,-5402
chr19:41218693-41218985	chr19	+	41218724	41218845	True	NM_025194,NM_001142555,NM_024876	chr19,chr19,chr19	+,-,-	ITPKC,ADCK4,ADCK4	4162,2217,3996
chr22:21325043-21326413	chr22	+	21325182	21326419	True	NM_001018060,NM_001008695,NR_027464,NM_001146288,NM_144704	chr22,chr22,chr22,chr22,chr22	+,-,+,+,+	AIFM3,THAP7,AIFM3,AIFM3,AIFM3	-5815,30036,-3786,-3786,-5815
chr12:112557594-112559120	chr12	+	112557681	112558935	True	NM_001143906,NM_024953,NM_006700	chr12,chr12,chr12	+,-,+	TRAFD1,NAA25,TRAFD1	4413,-11046,4413
chr5:10593787-10594420	chr5	+	10593935	10594226	True	NM_001164440,NM_004394	chr5,chr5	+,-	ANKRD33B,DAP	-29552,167218
chr2:216881777-216882074	chr2	+	216881777	216882102	True	NM_018000,NM_001142310	chr2,chr2	-,+	MREG,TMEM169	-3431,64486
chr3:119253758-119254818	chr3	+	119254056	119254708	True	NM_016589,NM_005191	chr3,chr3	+,-	C3orf1,CD80	-36753,23823
chr19:47286645-47287366	chr19	+	47287055	47287411	True	NM_001145144,NM_001145145,NM_005628,NM_024301	chr19,chr19,chr19,chr19	-,-,-,+	SLC1A5,SLC1A5,SLC1A5,FKRP	3184,773,4481,-37803
chr5:68663503-68664899	chr5	+	68664198	68664944	True	NM_003187,NM_002873,NM_133340,NM_133338,NM_133339,NM_001015892,NM_001015891,NM_133344,NM_133341,NM_016283,NM_133343,NM_133342	chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5,chr5	-,+,+,+,+,-,-,+,+,-,+,+	TAF9,RAD17,RAD17,RAD17,RAD17,TAF9,TAF9,RAD17,RAD17,TAF9,RAD17,RAD17	515,1587,1917,694,2336,946,946,694,1917,515,179,694
chr7:127224279-127224552	chr7	+	127224285	127224567	True	NM_024523,NM_020369,NM_001662	chr7,chr7,chr7	-,+,+	GCC1,FSCN3,ARF5	1137,9121,3838
chr4:4283205-4284440	chr4	+	4283358	4284332	True	NM_017816,NM_145291,NM_001145725	chr4,chr4,chr4	-,+,-	LYAR,ZBTB49,LYAR	7615,7591,7467
chr7:127670759-127671157	chr7	+	127670882	127671188	True	NM_022143,NR_027330	chr7,chr7	-,+	LRRC4,C7orf54	0,-33371
chr22:25615555-25616217	chr22	+	25615711	25616236	True	NM_182492,NM_000496	chr22,chr22	-,+	LRP5L,CRYBB2	142338,-150
chr7:142825973-142827329	chr7	+	142825972	142827019	True	NR_002140,NM_002652	chr7,chr7	-,+	OR6W1P,PIP	-65090,2154
chr6:110797157-110797474	chr6	+	110797170	110797362	True	NM_015891,NM_033125	chr6,chr6	+,-	CDC40,SLC22A16	-295597,532
chr10:74917101-74918416	chr10	+	74917504	74918149	True	NM_173348,NR_024203,NM_007265,NM_001135752,NM_001135753	chr10,chr10,chr10,chr10,chr10	+,-,-,-,-	FAM149B1,ECD,ECD,ECD,ECD	9727,9767,9767,9767,9767
chr1:67520929-67521743	chr1	+	67521193	67521776	True	NM_144701,NM_015139	chr1,chr1	+,-	IL23R,SLC35D1	110392,-1113
chr11:77786133-77786927	chr11	+	77786203	77786973	True	NM_001204054,NM_001204055,NM_003251,NM_001203260,NM_001203261,NM_001203262,NM_004549	chr11,chr11,chr11,chr11,chr11,chr11,chr11	-,-,+,-,-,-,-	NDUFC2,NDUFC2,THRSP,NDUFC2-KCTD14,NDUFC2-KCTD14,NDUFC2-KCTD14,NDUFC2	4342,4342,-11353,4342,4342,4342,4342
chr3:191035206-191035662	chr3	+	191035306	191035366	True	NM_198152,NM_174908	chr3,chr3	-,+	UTS2D,CCDC50	13009,11507
chr11:1862813-1863282	chr11	+	1862854	1863282	True	NM_001145829,NR_036185,NM_138567,NM_003282,NM_001145841	chr11,chr11,chr11,chr11,chr11	+,-,+,+,+	TNNI2,MIR4298,SYT8,TNNI2,TNNI2	-2186,17534,-7231,-2672,-1473
chr5:173491290-173492051	chr5	+	173491290	173491839	True	NM_138369,NM_015980	chr5,chr5	-,+	BOD1,HMP19	-447624,-18617
chr12:6757043-6758232	chr12	+	6757184	6757514	True	NM_001164094,NM_032489	chr12,chr12	+,-	COPS7A,ACRBP	75635,-604
chr4:164265190-164265440	chr4	+	164265351	164265465	True	NM_006174,NM_000909	chr4,chr4	+,-	NPY5R,NPY1R	-311,-11404
chrX:70837754-70838234	chrX	+	70837968	70838194	True	NM_001142797,NM_052957,NM_001504	chrX,chrX,chrX	-,+,-	CXCR3,ACRC,CXCR3	223,-40145,223
chr12:132625465-132625944	chr12	+	132625625	132625977	True	NM_175066,NM_024078	chr12,chr12	-,+	DDX51,NOC4L	2953,3015
chr20:23620430-23621295	chr20	+	23620574	23621160	True	NM_000099,NR_001279	chr20,chr20	-,+	CST3,CSTT	-2000,-120852
chr11:75061282-75062368	chr11	+	75061350	75062342	True	NM_020251,NM_004041,NM_001005	chr11,chr11,chr11	-,-,+	ARRB1,ARRB1,RPS3	583,583,48219
chrX:79269115-79270040	chrX	+	79269141	79269973	True	NM_001109878,NM_001109879,NM_004867,NM_016954	chrX,chrX,chrX,chrX	+,+,-,+	TBX22,TBX22,ITM2A,TBX22	281,281,-646092,7768
chr1:46942094-46943906	chr1	+	46942547	46943944	True	NM_147192,NM_001097611	chr1,chr1	+,-	DMBX1,KNCN	28723,72993
chrX:20286721-20287474	chrX	+	20286726	20287438	True	NM_001173456,NM_004586	chrX,chrX	+,-	PDHA1,RPS6KA3	-924766,-1976
chr19:55264587-55266463	chr19	+	55264683	55266277	True	NM_001127255,NM_014218,NM_015868	chr19,chr19,chr19	-,+,+	NLRP7,KIR2DL1,KIR2DL3	192648,14987,-14760
chr18:12948651-12949007	chr18	+	12948684	12948844	True	NM_031216,NM_001013437,NM_002828	chr18,chr18,chr18	+,+,-	SEH1L,SEH1L,PTPN2	-752,-752,-64350
chr21:34865497-34866668	chr21	+	34865961	34866530	True	NM_032195,NM_001040192,NM_017833	chr21,chr21,chr21	+,-,-	SON,DNAJC28,DNAJC28	48819,-1938,-2171
chr1:155658420-155658647	chr1	+	155658424	155658696	True	NM_001198903,NM_033657,NM_139118,NM_004632,NM_001198899,NM_018253,NM_001199849,NM_001199851,NM_001199850,NM_139121,NM_001198900,NM_001198901,NM_001198902,NM_139119,NM_001198904,NM_001198905,NM_001198906	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,+,-,+,-,-,+,+,+,-,-,-,-,-,-,-,-	YY1AP1,DAP3,YY1AP1,DAP3,YY1AP1,YY1AP1,DAP3,DAP3,DAP3,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1	23,188,177,188,-8804,-66,185,185,185,118,-66,173,91,-69,23,-66,177
chr5:133760539-133761169	chr5	+	133760607	133761095	True	NM_003337,NM_080656	chr5,chr5	+,-	UBE2B,CDKN2AIPNL	-53796,-13009
chr13:88324918-88325274	chr13	+	88324952	88325115	True	NM_015567,NR_033829	chr13,chr13	+,-	SLITRK5,LOC642345	-133,-1734
chr1:171653369-171653938	chr1	+	171653379	171653961	True	NM_001007239,NM_000261	chr1,chr1	+,-	METTL13,MYOC	96799,-31606
chr8:134423195-134423513	chr8	+	134423195	134423492	True	NR_037944,NM_006096	chr8,chr8	+,-	WISP1,NDRG1	-219964,-113648
chr16:58003132-58003808	chr16	+	58003430	58003764	True	NM_001297,NM_199456,NM_199046,NM_001135639	chr16,chr16,chr16,chr16	-,+,+,-	CNGB1,TEPP,TEPP,CNGB1	1306,6574,6574,1306
chr3:142608485-142609170	chr3	+	142608487	142609022	True	NM_013363,NM_001080415	chr3,chr3	-,+	PCOLCE2,U2SURP	-442,111349
chr2:215895250-215895890	chr2	+	215895342	215895907	True	NM_004044,NM_015657	chr2,chr2	+,-	ATIC,ABCA12	280771,953
chr12:49088900-49089193	chr12	+	49088905	49089235	True	NR_024266,NR_029448	chr12,chr12	-,+	LOC144438,LOC255411	-2676,31982
chr2:175871780-175872444	chr2	+	175872014	175872484	True	NM_001025201,NM_024583,NM_001822	chr2,chr2,chr2	-,+,-	CHN1,SCRN3,CHN1	-1844,-611615,-1844
chr18:51741403-51742157	chr18	+	51741518	51741695	True	NR_002970,NM_007195,NM_015832,NM_003927	chr18,chr18,chr18,chr18	-,+,-,-	SNORA37,POLI,MBD2,MBD2	7144,54153,9520,9520
chr3:155862408-155863782	chr3	+	155862561	155863759	True	NM_003471,NM_004733	chr3,chr3	+,-	KCNAB1,SLC33A1	-1869,-290313
chr10:76586889-76587765	chr10	+	76587029	76587741	True	NM_001003892,NM_012330	chr10,chr10	-,+	DUPD1,MYST4	230581,-701
chr17:46115103-46115428	chr17	+	46115116	46115474	True	NM_003204,NR_029687,NM_016429	chr17,chr17,chr17	+,-,-	NFE2L1,MIR152,COPZ2	10211,-503,28
chr20:3691514-3691746	chr20	+	3691528	3691648	True	NM_001197327,NM_023068	chr20,chr20	+,-	HSPA12B,SIGLEC1	21668,-3753
chr16:67448713-67448960	chr16	+	67448717	67448804	True	NM_013304,NM_000196	chr16,chr16	-,+	ZDHHC1,HSD11B2	1586,16231
chr1:158983184-158983567	chr1	+	158983349	158983621	True	NM_004833,NM_005531	chr1,chr1	-,+	AIM2,IFI16	63084,-3718
chr6:83074287-83074505	chr6	+	83074303	83074473	True	NM_006670,NM_001166392,NM_015525	chr6,chr6,chr6	+,+,-	TPBG,TPBG,IBTK	-1431,-393,-116855
chr9:132224933-132226363	chr9	+	132225458	132226324	True	NM_199350,NM_001012715	chr9,chr9	-,+	C9orf50,C9orf106	156781,-142214
chr1:53926929-53927165	chr1	+	53927094	53927182	True	NR_002314,NM_033067	chr1,chr1	-,+	FLJ40434,DMRTB1	-21401,-2073
chr12:54333755-54334464	chr12	+	54333978	54334496	True	NM_017410,NR_003716	chr12,chr12	+,-	HOXC13,HOTAIR	-1461,28069
chr11:92899802-92900234	chr11	+	92899875	92900275	True	NM_152313,NM_181645	chr11,chr11	-,+	SLC36A4,CCDC67	30870,163607
chr19:16011419-16013125	chr19	+	16011431	16012662	True	NM_001004465,NM_001082	chr19,chr19	+,-	OR10H4,CYP4F2	47155,-2547
chr2:131100952-131101166	chr2	+	131100958	131101060	True	NM_033416,NM_032357	chr2,chr2	+,-	IMP4,CCDC115	-520,-1036
chr4:120134158-120134954	chr4	+	120134291	120134783	True	NM_001001701,NM_019050	chr4,chr4	-,+	C4orf3,USP53	87239,-560
chr19:10148588-10149260	chr19	+	10148834	10149272	True	NM_015719,NR_027300	chr19,chr19	-,+	COL5A3,C3P1	-27687,2759
chr2:65355026-65356391	chr2	+	65355158	65356419	True	NM_004161,NM_015147,NM_015543	chr2,chr2,chr2	-,+,-	RAB1A,CEP68,RAB1A	1066,-71721,1066
chr12:25803069-25803440	chr12	+	25803097	25803261	True	NM_001164748,NM_001145727	chr12,chr12	+,-	RASSF8,IFLTD1	308702,-1609
chr2:175629128-175629633	chr2	+	175629209	175629556	True	NM_024583,NM_000079,NM_001039523	chr2,chr2,chr2	+,-,-	SCRN3,CHRNA1,CHRNA1	-368803,-9,-9
chr3:50227103-50227765	chr3	+	50227329	50227756	True	NM_000172,NM_006764,NM_144499	chr3,chr3,chr3	+,-,+	GNAT1,IFRD2,GNAT1	1286,102321,1286
chr5:77947401-77948673	chr5	+	77947544	77948342	True	NM_004866,NM_005779	chr5,chr5	+,-	SCAMP1,LHFPL2	-291259,-2896
chr6:124124506-124124750	chr6	+	124124517	124124683	True	NM_153355,NM_001040214,NM_006073	chr6,chr6,chr6	+,+,-	NKAIN2,NKAIN2,TRDN	385,385,-166575
chr7:148958663-148958887	chr7	+	148958768	148958894	True	NM_001001661,NM_001195220	chr7,chr7	-,+	ZNF425,ZNF783	-135330,367
chr3:49725292-49725543	chr3	+	49725291	49725353	True	NM_022064,NM_020998	chr3,chr3	+,-	RNF123,MST1	1636,893
chr8:99076122-99076786	chr8	+	99076279	99076539	True	NM_001170806,NM_000989,NM_173549	chr8,chr8,chr8	+,-,+	C8orf47,RPL30,C8orf47	210,-18461,210
chr12:91564552-91565532	chr12	+	91564551	91565559	True	NR_027932,NM_133507,NM_133506,NM_133505,NM_133504,NM_133503	chr12,chr12,chr12,chr12,chr12,chr12	+,-,-,-,-,-	CLLU1,DCN,DCN,DCN,DCN,DCN	1249747,6826,6826,6826,6826,7856
chr5:135290475-135291372	chr5	+	135290484	135290900	True	NM_002302,NM_012159	chr5,chr5	-,+	LECT2,FBXL21	25,-24529
chr3:46618809-46619221	chr3	+	46618835	46619135	True	NM_003212,NM_024512,NM_001174136	chr3,chr3,chr3	+,-,+	TDGF1,LRRC2,TDGF1	-23,-10824,-2844
chr3:46618809-46619221	chrX	+	109763961	109764062	False	NM_001171689,NR_002718	chrX,chrX	-,+	AMMECR1,TDGF3	-80500,-481
chr19:6461902-6463216	chr19	+	6462112	6462702	True	NM_139161,NM_174881,NM_024103	chr19,chr19,chr19	+,+,-	CRB3,CRB3,SLC25A23	1557,1557,-2331
chr15:23889885-23890228	chr15	+	23889885	23890273	True	NM_005664,NM_019066	chr15,chr15	+,-	MKRN3,MAGEL2	-79482,2770
chr11:67198251-67199548	chr11	+	67198352	67199481	True	NM_005608,NM_003952	chr11,chr11	-,+	PTPRCAP,RPS6KB2	5722,-2468
chr11:65345059-65345447	chr11	+	65345234	65345370	True	NM_001099409,NM_006396,NM_152832,NM_005714,NM_001098785,NM_001098784	chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,-,+,+	EHBP1L1,SSSCA1,FAM89B,KCNK7,FAM89B,FAM89B	-1776,-7342,-5465,18147,-5465,-5465
chr10:98024948-98025389	chr10	+	98025039	98025407	True	NM_001017520,NM_001114094,NM_013314	chr10,chr10,chr10	+,-,-	DNTT,BLNK,BLNK	38677,5976,5976
chr1:200864596-200864897	chr1	+	200864674	200864898	True	NM_001142569,NM_018265,NM_017596	chr1,chr1,chr1	+,+,-	C1orf106,C1orf106,KIF21B	-735,-4095,127980
chr14:94421730-94422474	chr14	+	94421739	94422466	True	NM_016150,NM_138344	chr14,chr14	-,+	ASB2,FAM181A	1352,-36532
chr11:120529549-120530858	chr11	+	120529760	120530876	True	NM_012101,NM_014619	chr11,chr11	-,+	TRIM29,GRIK4	-520897,151
chr19:17906534-17908455	chr19	+	17906563	17908455	True	NM_014256,NM_005543	chr19,chr19	+,-	B3GNT3,INSL3	-695,23915
chr19:20841757-20842794	chr19	+	20841882	20842717	True	NM_001076675,NR_034060,NM_145297	chr19,chr19,chr19	-,+,-	ZNF626,ZNF85,ZNF626	1735,263341,1735
chrX:15289840-15290197	chrX	+	15289875	15290148	True	NM_024087,NM_203281,NM_001031739,NM_001168530,NM_001168531	chrX,chrX,chrX,chrX,chrX	-,+,-,-,-	ASB9,BMX,ASB9,ASB9,ASB9	-1582,228751,-1582,-1582,-1286
chr12:87232615-87233547	chr12	+	87232644	87232995	True	NM_006183,NM_013244	chr12,chr12	+,-	NTS,MGAT4C	-964635,-33
chr19:49955279-49956272	chr19	+	49955450	49956321	True	NM_153329,NM_001145396,NM_017916	chr19,chr19,chr19	+,+,-	ALDH16A1,ALDH16A1,PIH1D1	151,151,-335
chrX:30236762-30237646	chrX	+	30236992	30237684	True	NM_000475,NM_002364	chrX,chrX	-,+	NR0B1,MAGEB2	89861,-3368
chr16:90077822-90078256	chr16	+	90077995	90078305	True	NM_001042610,NM_024043,NR_023348	chr16,chr16,chr16	-,-,+	DBNDD1,DBNDD1,GAS8	7682,-1466,10702
chrX:140967370-140968625	chrX	+	140967454	140968656	True	NM_145665,NM_177456	chrX,chrX	-,+	SPANXE,MAGEC3	-180799,13795
chr1:1372741-1372974	chr1	+	1372786	1372954	True	NM_199121,NR_026871,NM_022834	chr1,chr1,chr1	+,-,+	VWA1,LOC441869,VWA1	-1934,-16136,-1934
chrX:137804751-137805714	chrX	+	137804779	137805751	True	NM_004114,NR_028597	chrX,chrX	-,+	FGF13,SRD5A1P1	-10952,723226
chr3:170586832-170587564	chr3	+	170586966	170587538	True	NM_001099645,NM_001185056	chr3,chr3	-,+	RPL22L1,CLDN11	557,-448002
chr19:7295087-7295379	chr19	+	7295125	7295372	True	NM_000208,NM_001079817,NM_015318	chr19,chr19,chr19	-,-,+	INSR,INSR,ARHGEF18	-1114,-1114,164626
chr12:67663299-67663659	chr12	+	67663337	67663587	True	NM_021150,NM_018448	chr12,chr12	-,+	GRIP1,CAND1	-590412,-327
chr1:78443581-78444458	chr1	+	78443591	78444327	True	NM_007034,NM_003902	chr1,chr1	+,-	DNAJB4,FUBP1	26308,500
chr17:73504528-73505126	chr17	+	73504683	73505079	True	NM_207346,NM_020753,NM_001142643	chr17,chr17,chr17	+,-,-	TSEN54,CASKIN2,CASKIN2	7529,6598,929
chr2:208490219-208490765	chr2	+	208490387	208490650	True	NM_145280,NM_001127395,NM_001142300	chr2,chr2,chr2	-,-,+	METTL21A,METTL21A,CCNYL1	-691,-414,85613
chr10:119002382-119003625	chr10	+	119002612	119003650	True	NR_037436,NM_003054	chr10,chr10	-,+	MIR3663,SLC18A2	-75327,-2080
chr3:154820690-154821345	chr3	+	154820712	154821328	True	NM_007289,NR_037902	chr3,chr3	+,-	MME,LOC100507537	-22684,190217
chr4:24913716-24914148	chr4	+	24913815	24914109	True	NM_001130726,NM_003102	chr4,chr4	-,+	CCDC149,SOD3	541,-116781
chr2:47629379-47629936	chr2	+	47629531	47629963	True	NM_022055,NM_000251	chr2,chr2	-,+	KCNK12,MSH2	167557,299
chr10:17496708-17498442	chr10	+	17496871	17498460	True	NM_001004470,NR_034129	chr10,chr10	-,+	ST8SIA6,LOC100128098	-617,-67988
chr8:37793531-37793787	chr8	+	37793540	37793632	True	NM_004095,NM_152413	chr8,chr8	+,-	EIF4EBP1,GOT1L1	94387,4071
chr1:33369521-33369733	chr1	+	33369662	33369782	True	NM_033504,NM_002143	chr1,chr1	-,+	TMEM54,HPCA	-2709,-17615
chr19:36346431-36346802	chr19	+	36346608	36346838	True	NM_199180,NM_004646,NM_032123,NM_199179	chr19,chr19,chr19,chr19	+,-,+,+	KIRREL2,NPHS1,KIRREL2,KIRREL2	971,-3713,971,971
chr1:228352624-228353151	chr1	+	228352907	228353181	True	NM_181465,NM_001010867	chr1,chr1	-,+	MRPL55,IBA57	-55894,247
chr13:52375481-52375807	chr13	+	52375633	52375837	True	NM_031290,NM_001031719,NM_024705	chr13,chr13,chr13	+,-,-	CCDC70,DHRS12,DHRS12	60279,2447,2506
chr14:75334694-75335257	chr14	+	75334706	75335264	True	NM_001933,NM_001080408	chr14,chr14	+,-	DLST,PROX2	13329,-4169
chr3:128227403-128228018	chr3	+	128227458	128228003	True	NR_026954,NM_032638	chr3,chr3	+,-	LOC90246,GATA2	-832,-15428
chr15:49846727-49848272	chr15	+	49847411	49848289	True	NM_152647,NM_001144955	chr15,chr15	-,+	C15orf33,DTWD1	64879,64936
chr3:44403007-44403900	chr3	+	44403137	44403888	True	NM_173826,NM_181489	chr3,chr3	+,-	C3orf23,ZNF445	-23250,115324
chr12:56433914-56434373	chr12	+	56434074	56434256	True	NM_006928,NM_001029	chr12,chr12	-,+	PMEL,RPS26	-73578,1429
chr2:170335721-170336247	chr2	+	170335855	170336133	True	NM_152384,NM_024622	chr2,chr2	+,-	BBS5,FASTKD1	24,94341
chr1:77360834-77362351	chr1	+	77361528	77361969	True	NM_005482,NM_030965	chr1,chr1	-,+	PIGK,ST6GALNAC5	323220,-28393
chr2:42798075-42799273	chr2	+	42798194	42799148	True	NM_172344,NM_020744	chr2,chr2	-,+	KCNG3,MTA3	-76957,-2583
chrX:24045850-24047392	chrX	+	24046130	24047278	True	NM_030624,NM_001415	chrX,chrX	-,+	KLHL15,EIF2S3	-827,25786
chr6:157800654-157800940	chr6	+	157800706	157800974	True	NM_018452,NM_153746,NM_024630	chr6,chr6,chr6	-,+,+	C6orf35,ZDHHC14,ZDHHC14	-55453,1582,1582
chr17:76626882-76628405	chr17	+	76626914	76628285	True	NM_173628,NM_024419	chr17,chr17	-,+	DNAH17,PGS1	-53438,-252230
chr9:27528120-27528585	chr9	+	27528129	27528425	True	NM_024761,NM_020124	chr9,chr9	-,+	MOBKL2B,IFNK	1475,-3868
chr9:37786655-37786935	chr9	+	37786675	37786971	True	NM_016042,NM_001002269,NM_024345	chr9,chr9,chr9	-,-,+	EXOSC3,EXOSC3,DCAF10	-1610,-1608,13818
chr11:55930658-55931012	chr11	+	55930922	55931013	True	NM_001004058,NM_001005492	chr11,chr11	-,+	OR8K5,OR5J2	-3129,13080
chr8:103251298-103251556	chr8	+	103251430	103251490	True	NM_015713,NM_001172477,NM_001172478,NM_024410	chr8,chr8,chr8,chr8	-,-,-,+	RRM2B,RRM2B,RRM2B,ODF1	-84,-371,-84,312357
chr9:46270007-46270387	chr9	+	46270011	46270245	True	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-2639281,417320
chr9:46270007-46270387	chr9	+	67678988	67679156	False	NR_027422,NM_032250	chr9,chr9	-,+	FAM27B,ANKRD20A1	115083,247604
chr9:46270007-46270387	chr9	-	45113072	45113306	False	NR_027421,NM_001145196	chr9,chr9	+,-	FAM27C,FAM75A6	-122887,-1482342
chr9:46270007-46270387	chr9	-	47170312	47170480	False	NM_001145196,NR_003674	chr9,chr9	-,+	FAM75A6,KGFLP1	-3539582,-482797
chr18:33710189-33710670	chr18	+	33710258	33710725	True	NM_012319,NM_018255,NM_001099406	chr18,chr18,chr18	-,+,-	SLC39A6,ELP2,SLC39A6	-901,-422,-901
chr17:57184104-57184367	chr17	+	57184136	57184376	True	NM_001005207,NM_015294,NM_018304	chr17,chr17,chr17	-,-,+	TRIM37,TRIM37,PRR11	-60,-60,48483
chr2:131862601-131862835	chr2	+	131862600	131862773	True	NM_001100623,NM_017958,NM_001009993	chr2,chr2,chr2	+,+,-	PLEKHB2,PLEKHB2,FAM168B	-231,-231,-11596
chr15:21288037-21288679	chr15	+	21288353	21288470	True	NR_027411,NR_028506	chr15,chr15	+,-	GOLGA8C,NF1P1	-520732,-153728
chr15:21288037-21288679	chr15	+	20281164	20281281	False	NR_036432,NR_027411	chr15,chr15	-,+	HERC2P3,GOLGA8C	430213,486392
chr12:70187975-70189800	chr12	+	70187974	70189760	True	NM_001024647,NM_032735	chr12,chr12	+,-	RAB3IP,BEST3	-15271,-94778
chr9:138369761-138370298	chr9	+	138369898	138370318	True	NM_014811,NM_001048265	chr9,chr9	+,-	KIAA0649,C9orf116	1329,21493
chr3:126114899-126115188	chr3	+	126114957	126115175	True	NM_182628,NM_014079	chr3,chr3	+,-	CCDC37,KLF15	-1226,-38721
chr17:72746755-72747775	chr17	+	72746805	72747635	True	NM_004252,NM_015654,NR_037409	chr17,chr17,chr17	+,-,+	SLC9A3R1,NAT9,MIR3615	-2093,24885,-2104
chr5:101633147-101633865	chr5	+	101633482	101633865	True	NM_000919,NM_180991	chr5,chr5	+,-	PAM,SLCO4C1	567661,-1229
chr11:57103489-57104481	chr11	+	57103503	57104470	True	NM_002559,NM_003146	chr11,chr11	+,-	P2RX3,SSRP1	1478,-152
chr6:36352386-36353972	chr6	+	36352687	36353748	True	NM_016135,NM_173562	chr6,chr6	-,+	ETV7,KCTD20	1769,56795
chr2:109067305-109068390	chr2	+	109067426	109068275	True	NR_028063,NM_022336,NM_181453	chr2,chr2,chr2	+,-,+	GCC2,EDAR,GCC2	-1912,537610,-1912
chr5:138735172-138736154	chr5	+	138735190	138735943	True	NM_001033112,NM_194296,NM_016459,NM_001161546	chr5,chr5,chr5,chr5	+,-,-,-	PAIP2,SPATA24,MZB1,LOC389333	-57107,3883,-9585,-4305
chr17:21537280-21538394	chr17	+	21537466	21537632	True	NM_001113434,NM_001194958	chr17,chr17	-,+	C17orf51,KCNJ18	-82525,-229069
chr9:129883681-129883984	chr9	+	129883735	129883979	True	NM_032293,NM_012098	chr9,chr9	+,-	GARNL3,ANGPTL2	142776,1115
chr1:32804103-32804414	chr1	+	32804224	32804412	True	NM_023009,NM_052841	chr1,chr1	-,+	MARCKSL1,TSSK3	-2390,23449
chr19:638833-639196	chr19	+	638833	639041	True	NM_005035,NM_020637	chr19,chr19	-,+	POLRMT,FGF22	-5265,884
chr4:183839797-183840955	chr4	+	183839996	183840952	True	NR_003612,NM_001921,NM_001012732	chr4,chr4,chr4	+,-,-	FAM92A3,DCTD,DCTD	117865,-1366,-1366
chr10:135439752-135440496	chr10	+	135439788	135440489	True	NM_001127386	chr10	+	DUX4L2	39878
chr10:135439752-135440496	chr4	+	190947901	190948602	False	NM_012147,NM_001005217	chr4,chr4	+,-	DUX2,FRG2	40264,57
chr9:113017440-113017869	chr9	+	113017541	113017781	True	NM_001136562,NM_003329	chr9,chr9	+,-	AKAP2,TXN	-129811,1047
chr1:36930073-36930806	chr1	+	36930153	36930601	True	NM_024676,NM_031280	chr1,chr1	+,-	SH3D21,MRPS15	-157496,-113
chr1:205912857-205913420	chr1	+	205912962	205913396	True	NM_052934,NM_001123168,NM_134325	chr1,chr1,chr1	-,+,-	SLC26A9,FAM72A,SLC26A9	-374,225514,-374
chr4:140472488-140472894	chr4	+	140472668	140472869	True	NM_031296,NM_030648	chr4,chr4	+,-	RAB33B,SETD7	-97765,4759
chr18:40682433-40682709	chr18	+	40682436	40682582	True	NM_002647,NM_002930	chr18,chr18	+,-	PIK3C3,RIT2	-1147288,13125
chr20:23396392-23398075	chr20	+	23396623	23398091	True	NM_138283,NM_022080	chr20,chr20	+,-	CSTL1,NAPB	22230,4115
chr10:1777767-1778592	chr10	+	1777776	1778398	True	NR_033387,NM_018702	chr10,chr10	+,-	NCRNA00168,ADARB2	-209010,1370
chr11:134202852-134203175	chr11	+	134202851	134203219	True	NM_138342,NM_018644	chr11,chr11	+,-	GLB1L2,B3GAT1	-1134,78643
chr14:61803064-61804710	chr14	+	61803083	61804744	True	NM_001017970,NM_006255	chr14,chr14	-,+	TMEM30B,PRKCH	-54553,-14624
chr1:27306624-27307174	chr1	+	27306683	27307018	True	NM_152365,NM_001013642	chr1,chr1	-,+	C1orf172,TRNP1	-19782,13176
chr12:107975124-107975399	chr12	+	107975213	107975341	True	NM_012406,NM_001017523	chr12,chr12	-,+	PRDM4,BTBD11	179623,-630
chr8:146076609-146077104	chr8	+	146076656	146077086	True	NM_001081003,NM_001081004,NM_014066,NM_003416	chr8,chr8,chr8,chr8	-,-,-,+	COMMD5,COMMD5,COMMD5,ZNF7	1902,1421,1422,-23804
chr5:155773898-155775846	chr5	+	155774154	155775049	True	NM_001128209,NM_001146726	chr5,chr5	+,-	SGCD,TIMD4	-20451,615278
chr15:79599621-79601572	chr15	+	79599823	79601458	True	NM_002891,NM_007364	chr15,chr15	-,+	RASGRF1,TMED3	-216608,2032
chr7:82741464-82742213	chr7	+	82741683	82742255	True	NM_033026,NM_001127444	chr7,chr7	-,+	PCLO,CD36	49998,-2465977
chr19:8069705-8069928	chr19	+	8069734	8069977	True	NM_001419,NM_001201359	chr19,chr19	-,+	ELAVL1,CCL25	602,47668
chr17:43326061-43327978	chr17	+	43326174	43327951	True	NR_024434,NM_152343	chr17,chr17	+,-	LOC100133991,C17orf46	-922,11578
chr3:100582899-100584447	chr3	+	100582962	100584234	True	NM_015429,NM_001195478	chr3,chr3	-,+	ABI3BP,TFG	128158,-154634
chr11:65608506-65609839	chr11	+	65609555	65609821	True	NM_005507,NM_152760	chr11,chr11	-,+	CFL1,SNX32	16033,-8204
chr16:69786691-69788511	chr16	+	69787301	69788416	True	NM_014062,NM_199423,NM_007014	chr16,chr16,chr16	-,+,+	NOB1,WWP2,WWP2	464,7857,7857
chr12:113384583-113384821	chr12	+	113384598	113384810	True	NM_001193521,NM_006187	chr12,chr12	-,+	RASAL1,OAS3	188799,-8400
chr20:25371909-25372510	chr20	+	25371933	25372344	True	NM_015600,NM_021067,NM_001042472	chr20,chr20,chr20	-,+,-	ABHD12,GINS1,ABHD12	-315,15978,-315
chr17:80292991-80293912	chr17	+	80293083	80293961	True	NM_003004,NM_207459	chr17,chr17	-,+	SECTM1,TEX19	-1162,23161
chr20:25566468-25566775	chr20	+	25566503	25566571	True	NM_025176,NM_021067	chr20,chr20	-,+	NINL,GINS1	-350,-178231
chr16:90138561-90139853	chr16	+	90138823	90139579	True	NR_023348	chr16	+	GAS8	-49874
chr11:65647046-65647320	chr11	+	65647150	65647344	True	NR_037718,NM_198897,NM_004214,NM_016938,NM_001335	chr11,chr11,chr11,chr11,chr11	-,-,-,-,+	EFEMP2,FIBP,FIBP,EFEMP2,CTSW	-6745,8716,8716,-6745,-23
chr22:21370123-21370341	chr22	+	21370307	21370383	True	NM_001159554,NR_003608,NM_005446	chr22,chr22,chr22	+,-,+	P2RX6,MGC16703,P2RX6	-916,-1731,-894
chr22:21370123-21370341	chr22	-	21398435	21398495	False	NR_027006,NR_002829	chr22,chr22	+,-	LOC400891,P2RX6P	1753,93
chr17:43339806-43340101	chr17	+	43339832	43340150	True	NR_024435,NM_152343	chr17,chr17	+,-	LOC100133991,C17orf46	-325,-353
chr19:53071481-53072636	chr19	+	53071734	53072510	True	NM_001172655,NM_018260,NM_001105549	chr19,chr19,chr19	+,+,-	ZNF701,ZNF701,ZNF83	1406,1015,69188
chr1:23854355-23854830	chr1	+	23854605	23854831	True	NM_004091,NR_027042	chr1,chr1	-,+	E2F2,MDS2	2931,98992
chr7:49812608-49813011	chr7	+	49812610	49812988	True	NM_001159878,NM_198570	chr7,chr7	-,+	ZPBP,VWC2	319922,268
chr4:2063073-2063274	chr4	+	2063075	2063161	True	NM_005663,NM_178557	chr4,chr4	-,+	WHSC2,NAT8L	-52116,-1887
chr8:98787252-98787471	chr8	+	98787297	98787470	True	NR_002581,NM_018407	chr8,chr8	-,+	SNORA72,LAPTM4B	267026,338
chr3:136581714-136581973	chr3	+	136581737	136582027	True	NM_006153,NM_005862	chr3,chr3	+,-	NCK1,STAG1	-738,-110492
chr11:35684737-35685196	chr11	+	35684746	35685240	True	NM_015430,NM_017583	chr11,chr11	-,+	PAMR1,TRIM44	-137570,-444
chr20:23965364-23965972	chr20	+	23965780	23965952	True	NM_178312,NM_178311,NR_001279	chr20,chr20,chr20	-,-,+	GGTLC1,GGTLC1,CSTT	1610,3514,-466048
chr1:160231679-160232014	chr1	+	160231681	160232007	True	NR_028105,NR_028104,NR_028106,NR_028103,NR_002190,NM_015726	chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,-,+,-	DCAF8,DCAF8,DCAF8,DCAF8,SUMO1P3,DCAF8	361,361,320,361,55047,393
chr19:38396401-38396742	chr19	+	38396448	38396778	True	NM_031951,NM_015073	chr19,chr19	-,+	WDR87,SIPA1L3	589,1089
chr16:70208566-70208980	chr16	+	70208734	70208966	True	NR_033959,NM_173619	chr16,chr16	-,+	LOC729513,CLEC18C	51020,-857
chr16:70208566-70208980	chr16	+	69985822	69986054	False	NM_001136214,NR_003610,NM_182619	chr16,chr16,chr16	+,-,+	CLEC18A,PDXDC2P,CLEC18A	-1247,113847,-1063
chr16:70208566-70208980	chr16	-	74454373	74454605	False	NM_001011880,NM_002811	chr16,chr16	-,+	CLEC18B,PSMD7	813,-123751
chr6:100017901-100019333	chr6	+	100018006	100019188	True	NM_005190,NM_021620,NM_001013399	chr6,chr6,chr6	-,+,-	CCNC,PRDM13,CCNC	-1316,35461,-1316
chr12:64848857-64850340	chr12	+	64849325	64850248	True	NM_001170633,NM_013254	chr12,chr12	-,+	C12orf56,TBK1	-64980,-3545
chr10:93670014-93670255	chr10	+	93670055	93670124	True	NM_003972,NM_152429	chr10,chr10	+,-	BTAF1,FGFBP3	13611,-797
chr17:40342835-40343770	chr17	+	40342843	40343485	True	NR_024573,NM_012285,NM_033194,NM_032484,NM_001524,NM_001142622,NM_001142623	chr17,chr17,chr17,chr17,chr17,chr17,chr17	-,-,+,-,-,-,-	GHDC,KCNH4,HSPB9,GHDC,HCRT,GHDC,GHDC	2820,-9547,-68138,3115,-5373,3115,3115
chr7:56669962-56671044	chr7	+	56670162	56670959	True	NR_029420,NR_026929	chr7,chr7	-,+	LOC650226,DKFZp434L192	-154094,-106297
chr18:72922498-72922926	chr18	+	72922499	72922789	True	NM_005786,NM_175907	chr18,chr18	+,-	TSHZ1,ZADH2	31,-1218
chr12:104361522-104362626	chr12	+	104361918	104362533	True	NM_003211,NM_001135570	chr12,chr12	+,-	TDG,C12orf73	-2385,-10925
chr11:47448893-47449184	chr11	+	47448892	47449081	True	NM_002804,NM_152264	chr11,chr11	-,+	PSMC3,SLC39A13	-868,-18897
chr16:3662881-3663864	chr16	+	3662883	3663718	True	NM_005223,NM_032444	chr16,chr16	+,-	DNASE1,SLX4	39221,-1298
chr17:20368390-20368753	chr17	+	20368407	20368707	True	NM_001190790,NM_001042685	chr17,chr17	+,-	CDRT15L2,LGALS9B	114329,2191
chr17:20368390-20368753	chr17	-	18382243	18382543	False	NR_003554,NM_001040078	chr17,chr17	-,+	LOC220594,LGALS9C	42073,-2195
chr1:53923179-53923828	chr1	+	53923239	53923654	True	NR_002314,NM_033067	chr1,chr1	-,+	FLJ40434,DMRTB1	-17546,1417
chr8:118551452-118551897	chr8	+	118551716	118551794	True	NM_080651,NM_000127	chr8,chr8	+,-	MED30,EXT1	-18806,572314
chr10:697192-698311	chr10	+	697321	698112	True	NR_027152,NR_027151,NM_014974	chr10,chr10,chr10	+,+,-	C10orf108,C10orf108,DIP2C	-1363,-1492,37553
chr1:1386511-1387019	chr1	+	1387006	1387068	True	NR_026871,NM_001039211	chr1,chr1	-,+	LOC441869,ATAD3C	-30356,-1988
chr15:75641191-75641490	chr15	+	75641307	75641511	True	NR_030360,NM_024608	chr15,chr15	-,+	MIR631,NEIL1	4565,-2027
chr1:182923617-182925151	chr1	+	182923972	182925185	True	NM_030933,NM_002293	chr1,chr1	-,+	SHCBP1L,LAMC1	-1419,67409
chr6:133087538-133088806	chr6	+	133087760	133088659	True	NR_034175,NR_034174,NM_004665,NR_034173,NM_078488,NM_001016	chr6,chr6,chr6,chr6,chr6,chr6	-,-,-,-,-,+	VNN2,VNN2,VNN2,VNN2,VNN2,RPS12	-8738,-8738,-8727,-8738,-3162,47048
chr5:67586507-67588383	chr5	+	67586651	67588332	True	NM_181524,NM_181504,NM_176816	chr5,chr5,chr5	+,+,-	PIK3R1,PIK3R1,CCDC125	-2456,-213,1028136
chr19:695887-696173	chr19	+	696060	696202	True	NM_214710,NM_001040134	chr19,chr19	-,+	PRSS57,PALM	-599,12750
chr2:96971593-96971860	chr2	+	96971654	96971778	True	NM_014014,NM_001008949	chr2,chr2	-,+	SNRNP200,ITPRIPL1	-347,19283
chr3:156544446-156546094	chr3	+	156544612	156546088	True	NM_001193283,NR_003284,NM_001004316	chr3,chr3,chr3	+,-,+	LEKR1,PA2G4P4,LEKR1	-515,-14802,-567
chr19:43678751-43679525	chr19	+	43678846	43679570	True	NR_026881,NM_001130014	chr19,chr19	+,-	PRG1,PSG5	173637,11168
chr8:65491316-65491850	chr8	+	65491315	65491872	True	NM_152414,NR_015374	chr8,chr8	+,-	BHLHE22,LOC401463	922,-1495
chr12:125400172-125401968	chr12	+	125400185	125401827	True	NM_021009,NM_080626	chr12,chr12	-,+	UBC,BRI3BP	-598,76366
chr2:187350675-187350907	chr2	+	187350706	187350956	True	NM_182521,NM_018471	chr2,chr2	-,+	ZSWIM2,ZC3H15	362991,38
chr19:54727096-54727645	chr19	+	54727380	54727566	True	NM_001013,NM_001081450,NM_006864	chr19,chr19,chr19	+,-,-	RPS9,LILRB3,LILRB3	-22705,-421,-421
chr19:54727096-54727645	chr19	+	54747132	54747318	False	NM_001013,NM_024318	chr19,chr19	+,-	RPS9,LILRA6	-42457,-408
chr5:7850596-7850956	chr5	+	7850942	7851004	True	NM_001089584,NM_002454	chr5,chr5	-,+	C5orf49,MTRR	310,18212
chr15:32727666-32729351	chr15	+	32727764	32729041	True	NR_027470,NR_026859,NR_026858,NM_199357	chr15,chr15,chr15,chr15	-,-,-,+	FAM7A2,FAM7A3,FAM7A1,ARHGAP11A	-514,-699,-514,178649
chr15:32727666-32729351	chr15	-	30393959	30394949	False	NR_026859,NM_175610	chr15,chr15	+,-	FAM7A3,TJP1	985,-279253
chr15:32727666-32729351	chr15	-	30862956	30864233	False	NR_027470,NM_148911,NR_026858	chr15,chr15,chr15	+,-,+	FAM7A2,CHRFAM7A,FAM7A1	524,-177092,524
chr15:32727666-32729351	chr15	+	30686702	30687692	False	NM_148911,NM_139320,NR_026858	chr15,chr15,chr15	-,-,+	CHRFAM7A,CHRFAM7A,FAM7A1	-838,-838,177065
chr3:15374162-15376023	chr3	+	15374267	15375860	True	NM_033083,NM_001018009,NM_004844	chr3,chr3,chr3	+,-,-	EAF1,SH3BP5,SH3BP5	93203,7092,-163
chr1:28447241-28447840	chr1	+	28447441	28447737	True	NR_027268,NM_016311	chr1,chr1	-,+	LOC653566,ATPIF1	-24372,114864
chr3:168865410-168866757	chr3	+	168865460	168866800	True	NM_001163999,NR_030294,NM_001164000,NM_005241,NM_001105078,NM_001105077	chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-	MECOM,MIR551B,MECOM,MECOM,MECOM,MECOM	-1367,-595869,62,-1367,-1060,-1367
chr17:15603145-15603365	chr17	+	15603193	15603255	True	NM_006470,NM_001130842,NM_020652	chr17,chr17,chr17	-,+,+	TRIM16,ZNF286A,ZNF286A	-17000,-353,-353
chr17:15603145-15603365	chr17	-	18585352	18585414	False	NM_001145045,NM_001037330,NR_026718	chr17,chr17,chr17	-,+,-	ZNF286B,TRIM16L,FOXO3B	208,39987,-8858
chr10:134123254-134123546	chr10	+	134123282	134123473	True	NM_001143758,NM_173575	chr10,chr10	+,-	LRRC27,STK32C	22140,-1805
chr7:64024888-64026370	chr7	+	64025175	64025869	True	NM_178558,NM_001130022,NR_033245	chr7,chr7,chr7	-,-,+	ZNF680,ZNF680,LOC641746	-1670,-1670,17118
chr17:36453126-36453331	chr17	+	36453160	36453325	True	NR_036750,NM_032351	chr17,chr17	-,+	LOC440434,MRPL45	-39904,-213
chr17:36453126-36453331	chr17	-	45569648	45569699	False	NR_033934,NM_006310	chr17,chr17	-,+	MRPL45P2,NPEPPS	338,38744
chr9:140120126-140120365	chr9	+	140120154	140120396	True	NM_001190228,NM_080877,NM_001177316,NM_001177317,NM_031297,NM_199001	chr9,chr9,chr9,chr9,chr9,chr9	+,+,+,+,-,+	LOC643596,SLC34A3,SLC34A3,SLC34A3,RNF208,C9orf169	1621,4988,4812,4812,-4379,-561
chr11:66743707-66744040	chr11	+	66743716	66744050	True	NM_001136485,NM_001040716	chr11,chr11	+,-	C11orf86,PC	-1013,-17869
chr18:33775485-33777132	chr18	+	33775732	33776922	True	NM_017947,NM_001099406	chr18,chr18	+,-	MOCOS,SLC39A6	-8303,-66375
chr12:32830414-32830695	chr12	+	32830546	32830664	True	NM_001040436,NM_012062,NM_005690,NM_012063	chr12,chr12,chr12,chr12	-,+,+,+	YARS2,DNM1L,DNM1L,DNM1L	78276,1472,1472,1472
chr1:184911008-184911748	chr1	+	184911015	184911541	True	NM_052966,NM_007212	chr1,chr1	-,+	FAM129A,RNF2	32198,103009
chr7:2558673-2559026	chr7	+	2558732	2558884	True	NM_002304,NM_001040167,NM_001040168,NM_001166355,NM_152743	chr7,chr7,chr7,chr7,chr7	+,+,+,+,-	LFNG,LFNG,LFNG,LFNG,BRAT1	-1286,594,594,-6620,36558
chr12:51612817-51613213	chr12	+	51612878	51613200	True	NR_026893,NM_001136264	chr12,chr12	-,+	POU6F1,DAZAP2	-1401,19307
chr8:54166176-54167520	chr8	+	54166277	54167361	True	NM_000912,NM_005285	chr8,chr8	-,+	OPRK1,NPBWR1	-2083,-313860
chr3:186616404-186618002	chr3	+	186616806	186617915	True	NM_181573,NM_173216	chr3,chr3	-,+	RFC4,ST6GAL1	-92322,30399
chr11:101397517-101398726	chr11	+	101397667	101398278	True	NR_037485,NM_020802	chr11,chr11	-,+	MIR3920,KIAA1377	-7031,387467
chr1:1654477-1654880	chr1	+	1654537	1654907	True	NM_024011,NM_033489,NM_033488,NR_002946,NM_033487,NM_033486,NM_033492,NM_033493,NM_033529	chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1,chr1	-,-,-,+,-,-,-,-,-	CDK11A,CDK11B,CDK11B,MMP23A,CDK11B,CDK11B,CDK11B,CDK11B,CDK11A	934,918,918,-23210,918,918,918,918,934
chr1:1654477-1654880	chr1	+	1589215	1589269	False	NM_001110781,NR_002946	chr1,chr1	-,+	SLC35E2B,MMP23A	35024,-21107
chr17:46984909-46985776	chr17	+	46985077	46985621	True	NM_023079,NM_007241	chr17,chr17	+,-	UBE2Z,SNF8	109,36583
chr19:2901200-2901609	chr19	+	2901377	2901518	True	NM_021217,NM_173480	chr19,chr19	-,+	ZNF77,ZNF57	43508,-532
chr1:161334986-161335843	chr1	+	161335165	161335841	True	NM_001013625,NM_003001	chr1,chr1	-,+	C1orf192,SDHC	1873,-51053
chr13:19965953-19967064	chr13	+	19966242	19966984	True	NR_034026,NR_027248	chr13,chr13	+,-	LOC100287114,ANKRD26P3	-47114,-47129
chr22:39412679-39412953	chr22	+	39412856	39412938	True	NM_014508,NM_175709,NM_152426	chr22,chr22,chr22	+,-,+	APOBEC3C,CBX7,APOBEC3D	-2642,135662,4179
chr5:150041067-150042176	chr5	+	150041129	150042152	True	NM_001122853,NM_018047,NM_133371	chr5,chr5,chr5	+,-,+	MYOZ3,RBM22,MYOZ3	-776,38567,-776
chr16:85145581-85145878	chr16	+	85145678	85145786	True	NR_033984,NM_198491	chr16,chr16	+,-	LOC400548,FAM92B	24969,378
chr12:114842725-114843126	chr12	+	114842730	114843032	True	NM_181486,NM_080718,NM_080717,NM_138432,NM_000192	chr12,chr12,chr12,chr12,chr12	-,-,-,+,-	TBX5,TBX5,TBX5,SDSL,TBX5	907,-1027,3265,-982565,3265
chr19:50196428-50196835	chr19	+	50196511	50196813	True	NM_001101340,NM_001136052,NM_001571,NM_152359,NM_001199752,NM_001199753	chr19,chr19,chr19,chr19,chr19,chr19	+,+,-,+,+,+	C19orf76,CPT1C,IRF3,CPT1C,CPT1C,CPT1C	-4620,-2197,-27379,-2197,-2197,-2197
chr7:43152776-43153047	chr7	+	43152931	43153021	True	NM_015052,NM_002787	chr7,chr7	+,-	HECW1,PSMA2	-784,-181126
chr19:52841475-52842150	chr19	+	52841480	52842107	True	NM_001161427,NM_001161426,NM_001161425,NM_001102657,NM_173530	chr19,chr19,chr19,chr19,chr19	+,+,+,-,+	ZNF610,ZNF610,ZNF610,ZNF836,ZNF610	-2033,-2033,-2033,-166584,6574
chr2:235861675-235862085	chr2	+	235861680	235862011	True	NM_014521,NM_005737	chr2,chr2	+,-	SH3BP4,ARL4C	-1103,-455987
chr11:93061490-93061928	chr11	+	93061510	93061746	True	NM_152313,NM_181645	chr11,chr11	-,+	SLC36A4,CCDC67	-130415,2136
chr19:10215763-10216583	chr19	+	10215792	10216575	True	NM_002566,NM_031917,NM_001198690,NR_003688,NR_004381,NM_001040664,NM_020230	chr19,chr19,chr19,chr19,chr19,chr19,chr19	+,-,+,+,+,+,+	P2RY11,ANGPTL6,PPAN-P2RY11,SNORD105B,SNORD105,PPAN-P2RY11,PPAN	5621,-2367,323,3849,1751,323,323
chr22:41955901-41956531	chr22	+	41955933	41956520	True	NM_001018052,NM_014460	chr22,chr22	-,+	POLR3H,CSDC2	-15454,493
chr19:44175015-44175980	chr19	+	44175137	44175793	True	NM_001005376,NM_001005377,NM_019612,NM_002659	chr19,chr19,chr19,chr19	-,-,+,-	PLAUR,PLAUR,IRGC,PLAUR	-639,-639,44420,-639
chr15:54240733-54241488	chr15	+	54241002	54241506	True	NM_182758,NM_001080534	chr15,chr15	-,+	WDR72,UNC13C	-189143,63594
chr2:234556080-234557197	chr2	+	234556139	234557089	True	NM_019075,NM_018218	chr2,chr2	+,-	UGT1A10,USP40	-11072,-81903
chr19:15530628-15531655	chr19	+	15530702	15531387	True	NM_014371,NR_031716	chr19,chr19	-,+	AKAP8L,MIR1470	-869,28971
chr13:52598170-52598796	chr13	+	52598169	52598827	True	NM_001005918,NM_021645	chr13,chr13	-,+	ATP7B,UTP14C	-12539,-1
chr17:48714323-48714891	chr17	+	48714448	48714924	True	NM_052855,NM_001144070,NM_003786	chr17,chr17,chr17	-,+,+	ANKRD40,ABCC3,ABCC3	70396,-2281,-2281
chr16:30570650-30571955	chr16	+	30570683	30571652	True	NM_001172679,NM_002209,NM_033410	chr16,chr16,chr16	-,+,-	ZNF764,ITGAL,ZNF764	-1041,-86751,-1041
chr10:121301693-121301895	chr10	+	121301737	121301895	True	NM_001005339,NM_004281,NM_002925	chr10,chr10,chr10	-,+,-	RGS10,BAG3,RGS10	377,108986,-5692
chr7:152140438-152140832	chr7	+	152140618	152140798	True	NR_002935,NM_170606	chr7,chr7	+,-	FABP5P3,MLL3	-6706,-7528
chr15:89168036-89169448	chr15	+	89168184	89169265	True	NM_022767,NR_026645	chr15,chr15	+,-	AEN,DET1	-3708,-78272
chr1:11793960-11794221	chr1	+	11793991	11794065	True	NM_001040195,NM_001040194,NM_001040197,NM_001040196,NM_020350,NM_001127325	chr1,chr1,chr1,chr1,chr1,chr1	+,+,+,+,+,-	AGTRAP,AGTRAP,AGTRAP,AGTRAP,AGTRAP,MAD2L2	2076,2076,2076,2076,2076,-42313
chr12:52988842-52990493	chr12	+	52989402	52990153	True	NM_002284,NM_080747,NM_001146226,NM_001146225	chr12,chr12,chr12,chr12	+,-,-,-	KRT86,KRT72,KRT72,KRT72	-293816,5234,5234,5234
chr4:155526796-155527016	chr4	+	155526801	155527045	True	NM_021870,NM_005141,NM_000509	chr4,chr4,chr4	-,+,-	FGG,FGB,FGG	6907,-42733,6907
chr12:111049926-111051094	chr12	+	111050080	111051112	True	NM_139283,NM_001082538,NM_001082537,NM_024549,NM_001173976,NM_001173975	chr12,chr12,chr12,chr12,chr12,chr12	-,+,+,+,+,+	PPTC7,TCTN1,TCTN1,TCTN1,TCTN1,TCTN1	-29016,719,719,719,719,799
chr11:452174-452446	chr11	+	452242	452341	True	NM_030783,NM_001012302	chr11,chr11	+,-	PTDSS2,ANO9	-2013,-10231
chr9:132964559-132965813	chr9	+	132964686	132965842	True	NM_001128826,NM_015033	chr9,chr9	+,-	NCS1,FNBP1	-1865,-159213
chr1:46268977-46269219	chr1	+	46268982	46269208	True	NM_005897,NM_015112	chr1,chr1	-,+	IPP,MAST2	-52497,76
chr6:52148144-52149163	chr6	+	52148148	52149184	True	NM_133367,NM_002388	chr6,chr6	+,-	PAQR8,MCM3	77741,448
chr4:6202721-6204221	chr4	+	6202876	6204201	True	NM_001099433,NR_037863,NM_144720	chr4,chr4,chr4	-,+,-	JAKMIP1,LOC285484,JAKMIP1	-558,-467,-558
chr17:883713-883937	chr17	+	883788	883856	True	NM_022463,NM_013337	chr17,chr17	-,+	NXN,TIMM22	-778,16500
chr11:56059312-56060126	chr11	+	56059399	56059894	True	NM_001004745,NM_001005199	chr11,chr11	+,-	OR5T1,OR8H1	-16341,-861
chr1:236558652-236558877	chr1	+	236558707	236558851	True	NM_145861,NM_019891,NM_080738	chr1,chr1,chr1	+,-,+	EDARADD,ERO1LB,EDARADD	-1078,-113368,-42
chr16:31214344-31214605	chr16	+	31214364	31214648	True	NM_145182,NM_001008274,NM_013258	chr16,chr16,chr16	-,+,-	PYCARD,TRIM72,PYCARD	-267,10693,-267
chr10:129926881-129927198	chr10	+	129927096	129927161	True	NM_130435,NM_002417,NM_001145966	chr10,chr10,chr10	+,-,-	PTPRE,MKI67,MKI67	-81336,-2628,-2628
chr15:75750001-75751822	chr15	+	75750112	75750881	True	NM_001145357,NM_015477,NM_024608,NM_001145358	chr15,chr15,chr15,chr15	-,-,+,-	SIN3A,SIN3A,NEIL1,SIN3A	-1988,-6186,-110834,-6025
chr9:33290603-33290824	chr9	+	33290624	33290792	True	NM_147134,NM_002504,NM_004323,NM_147133	chr9,chr9,chr9,chr9	+,+,-,+	NFX1,NFX1,BAG1,NFX1	-257,-257,-25865,-257
chr10:32049309-32049824	chr10	+	32049347	32049816	True	NM_001174094,NM_018287	chr10,chr10	+,-	ZEB1,ARHGAP12	-439334,168011
chr5:1113173-1113459	chr5	+	1113187	1113433	True	NM_001003841,NM_006598	chr5,chr5	+,-	SLC6A19,SLC12A7	88276,-1015
chr1:24046797-24048726	chr1	+	24046796	24047877	True	NM_003198,NM_001127621	chr1,chr1	+,-	TCEB3,GALE	21978,78233
chr19:46915794-46916022	chr19	+	46915884	46916004	True	NM_006247,NM_032040	chr19,chr19	+,-	PPP5C,CCDC8	-65684,965
chr12:105206493-105207572	chr12	+	105206503	105207362	True	NM_152318,NM_032148	chr12,chr12	+,-	C12orf45,SLC41A2	172735,115166
chr19:39279114-39279322	chr19	+	39279207	39279345	True	NM_002307,NM_001042507	chr19,chr19	-,+	LGALS7,LGALS7B	-15050,504
chr2:113240607-113241002	chr2	+	113240642	113240956	True	NM_153712,NM_001164463	chr2,chr2	+,-	TTL,RGPD8	-951,-49420
chr5:138880837-138882539	chr5	+	138881164	138882479	True	NM_198282,NM_003339	chr5,chr5	-,+	TMEM173,UBE2D2	-18821,58271
chr1:205601352-205603260	chr1	+	205601532	205603136	True	NM_021795,NM_001973,NM_181644	chr1,chr1,chr1	-,-,+	ELK4,ELK4,MFSD4	-3,-3,-63471
chr2:179746952-179748201	chr2	+	179747139	179748007	True	NM_019091,NM_133379	chr2,chr2	+,-	PLEKHA3,TTN	-401992,-74989
chr12:100379876-100381125	chr12	+	100380164	100380902	True	NM_152788,NR_031728	chr12,chr12	-,+	ANKS1B,MIR1827	-1732,202759
chr20:1471882-1472173	chr20	+	1472122	1472196	True	NM_014723,NM_001122962,NM_001134836	chr20,chr20,chr20	+,-,-	SNPH,SIRPB2,SIRPB2	-225213,87,87
chr19:58180616-58181429	chr19	+	58180719	58181211	True	NM_152677,NM_001085384	chr19,chr19	+,-	ZSCAN4,ZNF154	-473,39418
chr17:20536215-20536868	chr17	+	20536743	20536853	True	NM_001190790,NR_029393	chr17,chr17	+,-	CDRT15L2,KRT16P3	-53757,-128932
chr1:211557757-211558614	chr1	+	211557893	211558380	True	NM_001164688,NR_026761	chr1,chr1	-,+	RD3,C1orf97	107942,-1847
chr17:19013022-19013771	chr17	+	19013096	19013740	True	NM_001129778,NM_006613	chr17,chr17	+,-	GRAPL,GRAP	17041,-62760
chr17:19013022-19013771	chr17	+	19139258	19139903	False	NM_014964,NM_148921,NM_001102664,NR_031591	chr17,chr17,chr17,chr17	+,+,+,-	EPN2,EPN2,EPN2,MIR1180	786,786,786,108034
chr1:186807233-186808465	chr1	+	186807266	186808508	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-157707,-9292
chr1:16069924-16070579	chr1	+	16069934	16070108	True	NM_001089591,NM_001013641,NM_207348	chr1,chr1,chr1	-,+,+	UQCRHL,TMEM82,SLC25A34	64136,-1068,-7176
chr7:30428698-30429430	chr7	+	30428933	30429447	True	NM_006092,NR_002186	chr7,chr7	-,+	NOD1,DKFZP586I1420	88996,-19325
chr12:47223794-47224660	chr12	+	47224137	47224687	True	NM_138371,NM_018018,NM_001143824	chr12,chr12,chr12	+,-,-	FAM113B,SLC38A4,SLC38A4	385364,-4357,-4357
chr3:51908798-51909576	chr3	+	51908836	51909548	True	NM_001145059,NM_203424	chr3,chr3	-,+	IQCF5,IQCF2	102,-13242
chrX:80065061-80065499	chrX	+	80065085	80065531	True	NM_152630,NM_153252	chrX,chrX	+,-	FAM46D,BRWD3	-389190,124
chr21:26931853-26933660	chr21	+	26932283	26933579	True	NR_024092,NR_001458	chr21,chr21	-,+	C21orf71,MIR155HG	22007,877
chr7:128048774-128048998	chr7	+	128048830	128048910	True	NM_000883,NM_001142576,NM_001142574,NM_001142575,NM_001142573,NM_183243,NM_001098786,NM_001102605	chr7,chr7,chr7,chr7,chr7,chr7,chr7,chr7	-,-,-,-,-,-,+,-	IMPDH1,IMPDH1,IMPDH1,IMPDH1,IMPDH1,IMPDH1,C7orf68,IMPDH1	1176,1176,-2806,-2806,-2806,1176,46973,1176
chr11:13411307-13411981	chr11	+	13411328	13411836	True	NM_001178,NM_032320	chr11,chr11	+,-	ARNTL,BTBD10	-112064,73052
chr16:70491431-70492356	chr16	+	70491809	70492043	True	NM_145059,NM_006927	chr16,chr16	+,-	FUK,ST3GAL2	-3369,-18818
chr11:6010746-6011407	chr11	+	6010751	6011436	True	NM_001005173,NM_001003443	chr11,chr11	-,+	OR52L1,OR56A3	-2536,-42225
chr19:15237815-15238762	chr19	+	15238139	15238589	True	NM_006844,NM_033025	chr19,chr19	-,+	ILVBL,SYDE1	-1562,-19983
chr2:191745325-191745576	chr2	+	191745405	191745607	True	NM_014905,NM_007315	chr2,chr2	+,-	GLS,STAT1	-41,133419
chr6:29141676-29142080	chr6_mcf_hap5	+	445566	445644	False	NM_030905,NM_001005226	chr6_mcf_hap5,chr6_mcf_hap5	+,-	OR2J2,OR2B3	-768,-86938
chr6:29141676-29142080	chr6	+	29141731	29142099	True	NM_030905,NM_001005226	chr6,chr6	+,-	OR2J2,OR2B3	-471,-86641
chr6:29141676-29142080	chr6_cox_hap2	+	660893	660971	False	NM_030905,NM_001005226	chr6_cox_hap2,chr6_cox_hap2	+,-	OR2J2,OR2B3	-768,-86930
chr16:85833959-85834320	chr16	+	85834049	85834201	True	NM_001142288,NM_001861,NM_006067	chr16,chr16,chr16	-,+,-	COX4NB,COX4I1,COX4NB	-901,-935,-901
chr17:38942473-38944310	chr17	+	38942762	38944356	True	NM_181537,NM_001195387	chr17,chr17	-,+	KRT27,TMEM99	-3976,30987
chr22:30278594-30279067	chr22	+	30278820	30278999	True	NM_021090,NM_153051,NM_153050,NM_032204	chr22,chr22,chr22,chr22	+,+,+,-	MTMR3,MTMR3,MTMR3,ASCC2	158,158,158,-44566
chr3:187082341-187083182	chr3	+	187082429	187083209	True	NM_022147,NM_001031849	chr3,chr3	+,-	RTP4,MASP1	2958,-72619
chr4:56448945-56450582	chr4	+	56449479	56450163	True	NM_152401,NM_018475	chr4,chr4	-,+	PDCL2,TMEM165	8276,-187450
chr16:82660841-82661085	chr16	+	82660978	82661134	True	NM_005792,NM_001257	chr16,chr16	-,+	MPHOSPH6,CDH13	-457149,-451
chr2:99771634-99772265	chr2	+	99771673	99772165	True	NR_037935,NR_037936,NM_015929,NM_025244,NM_145197,NM_145196,NM_145199,NM_145198,NM_001204830	chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2,chr2	+,+,+,-,+,+,+,+,+	LIPT1,LIPT1,LIPT1,TSGA10,LIPT1,LIPT1,LIPT1,LIPT1,LIPT1	-187,-306,-306,-486,-306,-306,-306,-306,-187
chr4:72620347-72620786	chr4	+	72620400	72620810	True	NM_004885,NM_000583	chr4,chr4	+,-	NPFFR2,GC	276710,29319
chr18:46069199-46069776	chr18	+	46069216	46069710	True	NM_001190823,NM_001142397,NM_014772	chr18,chr18,chr18	-,+,+	SMAD7,CTIF,CTIF	399517,-3841,-3841
chr19:22952490-22953281	chr19	+	22952630	22953134	True	NM_020855,NM_001080409	chr19,chr19	+,-	ZNF492,ZNF99	-135566,32
chr2:220436628-220437170	chr2	+	220436776	220437122	True	NM_002191,NM_015311,NM_001173431,NM_001173408	chr2,chr2,chr2,chr2	+,-,-,-	INHA,OBSL1,OBSL1,OBSL1	27,-508,-508,-508
chr4:16869100-16870565	chr4	+	16869151	16870379	True	NM_001130834,NR_027697	chr4,chr4	-,+	LDB2,FLJ39653	30095,-640916
chr2:133425062-133425971	chr2	+	133425101	133425883	True	NM_001077427,NM_001508,NM_144586	chr2,chr2,chr2	-,+,-	LYPD1,GPR39,LYPD1	3245,-251015,2656
chr7:33139144-33139833	chr7	+	33139402	33139778	True	NM_001033604,NM_203288	chr7,chr7	+,-	BBS9,RP9	29373,9274
chrX:100354339-100354866	chrX	+	100354501	100354755	True	NM_006733,NM_024917	chrX,chrX	+,-	CENPI,TRMT2B	42,-47396
chr10:38461592-38462410	chr10	+	38461737	38462235	True	NM_145011,NR_024524	chr10,chr10	-,+	ZNF25,LOC100129055	-196284,2363
chr7:50861404-50861652	chr7	+	50861498	50861590	True	NM_001001555,NR_033845	chr7,chr7	-,+	GRB10,LOC100129427	-339,-262098
chr10:71177671-71178894	chr10	+	71177685	71178569	True	NM_001057,NM_012339	chr10,chr10	-,+	TACR2,TSPAN15	-1011,32656
chr3:136580389-136580837	chr3	+	136580454	136580834	True	NM_006153,NM_005862	chr3,chr3	+,-	NCK1,STAG1	215,-109209
chr12:119770601-119770951	chr12	+	119770616	119770770	True	NR_024246,NM_178499	chr12,chr12	-,+	LOC144742,CCDC60	-29431,1746
chr3:139257391-139258094	chr3	+	139257440	139258090	True	NM_001130992,NM_020191,NM_001130993,NM_002899	chr3,chr3,chr3,chr3	-,+,-,-	RBP1,MRPS22,RBP1,RBP1	631,-194630,631,631
chr10:70322447-70323528	chr10	+	70322597	70323424	True	NM_030625,NM_152707	chr10,chr10	+,-	TET1,SLC25A16	-2532,-35317
chr17:39685462-39685924	chr17	+	39685468	39685952	True	NM_002276,NM_005801	chr17,chr17	-,+	KRT19,EIF1	-827,159174
chr19:52293624-52295459	chr19	+	52293827	52295496	True	NM_002029,NM_002030	chr19,chr19	-,+	FPR1,FPR3	-38677,2914
chr13:51484588-51484826	chr13	+	51484635	51484817	True	NM_001142279,NM_024570,NM_198989	chr13,chr13,chr13	+,+,-	RNASEH2B,RNASEH2B,DLEU7	-872,-872,-66750
chr1:154532144-154533464	chr1	+	154532194	154533258	True	NM_000748,NM_017582	chr1,chr1	+,-	CHRNB2,UBE2Q1	6998,-1074
chr11:67081214-67082111	chr11	+	67081262	67082052	True	NM_021173,NR_024469	chr11,chr11	-,+	POLD4,LOC100130987	39052,3257
chr11:2010584-2010798	chr11	+	2010707	2010813	True	NR_024471,NR_002196,NR_030533,NM_021134	chr11,chr11,chr11,chr11	-,-,-,+	LOC100133545,H19,MIR675,MRPL23	387,8302,7298,-42256
chr14:102021811-102022511	chr14	+	102021810	102022378	True	NR_002770,NR_031649,NM_001362	chr14,chr14,chr14	-,-,+	DIO3OS,MIR1247,DIO3	29,4431,5309
chr6:109804429-109804736	chr6	+	109804428	109804494	True	NM_014797,NM_003080,NM_001164313	chr6,chr6,chr6	-,+,-	ZBTB24,SMPD2,ZBTB24	2,-42548,2
chr3:189836816-189837094	chr3	+	189837077	189837150	True	NM_001134418,NM_006580,NM_018192	chr3,chr3,chr3	-,+,-	LEPREL1,CLDN16,LEPREL1	3133,268510,1815
chr8:12293896-12294435	chr8	+	12294139	12294409	True	NR_026789,NM_001137610	chr8,chr8	+,-	FAM66A,FAM86B2	-74662,-287
chr8:12293896-12294435	chr8	+	12051944	12052010	False	NM_001083537,NR_003494,NR_027425	chr8,chr8,chr8	-,-,+	FAM86B1,FAM86B1,FAM66D	-320,-320,-78704
chr21:44299403-44299664	chr21	+	44299557	44299707	True	NM_018669,NM_033661,NM_001001503	chr21,chr21,chr21	-,-,+	WDR4,WDR4,NDUFV3	21,21,13670
chr11:113640901-113641259	chr11	+	113641159	113641275	True	NM_001101389,NM_004724	chr11,chr11	+,-	CLDN25,ZW10	9242,3208
chr8:86907089-86907556	chr8	+	86907119	86907580	True	NR_003594	chr8	-	REXO1L2P	-66948
chr17:73199567-73200033	chr17	+	73199787	73199921	True	NM_001005849,NM_024844	chr17,chr17	-,+	SUMO2,NUP85	-20689,1675
chr8:37389551-37390288	chr8	+	37389574	37390196	True	NM_025069,NR_003671	chr8,chr8	+,-	ZNF703,LOC728024	163104,215418
chr13:41641215-41641580	chr13	+	41641406	41641495	True	NM_172373,NM_007187	chr13,chr13	-,+	ELF1,WBP4	-47898,-5769
chr22:36239233-36240700	chr22	+	36239534	36240298	True	NM_030642,NM_001082576,NM_014309,NM_001082577,NM_001031695	chr22,chr22,chr22,chr22,chr22	+,-,-,-,-	APOL5,RBFOX2,RBFOX2,RBFOX2,RBFOX2	-125675,-2904,-2904,-2904,-2904
chr10:11207911-11209452	chr10	+	11208091	11209482	True	NM_001083591,NR_024411,NM_001025076	chr10,chr10,chr10	+,-,+	CELF2,LOC254312,CELF2	-1149,-213965,-1149
chrX:34150355-34150568	chrX	+	34150393	34150598	True	NM_203408,NM_152631	chrX,chrX	-,+	FAM47A,FAM47B	54,810314
chr9:123847115-123848645	chr9	+	123847137	123848567	True	NM_007018,NM_001735	chr9,chr9	+,-	CEP110,C5	2006,-34583
chr19:14139165-14140927	chr19	+	14139457	14140971	True	NM_004843,NM_002918,NM_080864	chr19,chr19,chr19	+,-,+	IL27RA,RFX1,RLN3	1290,-22323,-491
chr4:77170236-77170670	chr4	+	77170409	77170717	True	NM_005506,NM_001136570	chr4,chr4	-,+	SCARB2,FAM47E	-35357,2135
chr1:54485314-54486069	chr1	+	54485464	54485760	True	NM_001010978,NM_153035	chr1,chr1	-,+	LDLRAD1,TCEANC2	-1661,33513
chr4:9594190-9594871	chr4	+	9594485	9594793	True	NR_031688,NM_001040448	chr4,chr4	-,+	MIR548I2,DEFB131	-36548,-148280
chr17:17496657-17498477	chr17	+	17496687	17498017	True	NM_030665,NM_148172	chr17,chr17	+,-	RAI1,PEMT	86769,-1693
chr7:5255149-5255723	chr7	+	5255268	5255682	True	NM_001033520,NR_034163	chr7,chr7	+,-	WIPI2,ZNF890P	-1419,-71091
chr19:4639655-4640073	chr19	+	4639760	4640052	True	NM_001167942,NM_152362,NM_019107	chr19,chr19,chr19	+,+,-	TNFAIP8L1,TNFAIP8L1,C19orf10	4,-284,30413
chr10:135268124-135268428	chr10	+	135268393	135268456	True	NR_002934,NM_001012508	chr10,chr10	+,-	LOC619207,SPRN	-1013,-30272
chr1:68516850-68517203	chr1	+	68516900	68517252	True	NM_004675,NM_001924	chr1,chr1	-,+	DIRAS3,GADD45A	-440,-366094
chr1:204167259-204167476	chr1	+	204167263	204167363	True	NM_005686,NM_002256	chr1,chr1	+,-	SOX13,KISS1	-125068,-1644
chr22:26962685-26962938	chr22	+	26962743	26962897	True	NM_001008566,NM_001886	chr22,chr22	-,+	TPST2,CRYBA4	-1373,55030
chr12:53076862-53077590	chr12	+	53076878	53077473	True	NM_199187,NM_006121	chr12,chr12	+,-	KRT18,KRT1	265181,-2687
chr3:26664176-26664444	chr3	+	26664185	26664345	True	NM_052953,NM_199347	chr3,chr3	+,-	LRRC3B,NEK10	-22,746617
chr1:185273891-185274909	chr1	+	185273912	185274922	True	NM_017673,NM_006469	chr1,chr1	+,-	SWT1,IVNS1ABP	-147679,11589
chr6:46713409-46714672	chr6	+	46713502	46714696	True	NM_001162435,NM_001168357	chr6,chr6	+,-	LOC100287718,PLA2G7	-43,-10072
chr9:140151278-140151865	chr9	+	140151286	140151770	True	NM_015456,NM_001004353,NM_001001710	chr9,chr9,chr9	+,+,-	COBRA1,C9orf173,FAM166A	-1578,-5607,-9064
chr14:35592854-35593101	chr14	+	35592857	35593106	True	NM_017917,NM_014672	chr14,chr14	-,+	PPP2R3C,KIAA0391	-1338,-1133
chr17:43483433-43483789	chr17_ctg5_hap1	+	98599	98950	False	NM_001159330,NM_001113738	chr17_ctg5_hap1,chr17_ctg5_hap1	-,+	ARHGAP27,ARL17A	-14,96770
chr17:43483433-43483789	chr17	+	43483463	43483814	True	NM_001159330,NR_024435	chr17,chr17	-,+	ARHGAP27,LOC100133991	-14,-143957
chr10:23634410-23635198	chr10	+	23634409	23635128	True	NM_153714,NM_001145373	chr10,chr10	-,+	C10orf67,OTUD1	-637,93069
chr8:93978505-93979972	chr8	+	93978652	93979594	True	NM_001171795,NM_001191035,NM_001171797,NM_001171798,NM_001171799,NM_145269,NM_001171796,NM_001191036	chr8,chr8,chr8,chr8,chr8,chr8,chr8,chr8	-,-,-,-,-,+,-,-	C8orf83,C8orf83,C8orf83,C8orf83,C8orf83,FAM92A1,C8orf83,C8orf83	-280,-387,-280,-280,-280,733178,-280,-835
chr7:129989197-129990738	chr7	+	129989579	129990737	True	NM_001127442,NM_001127441,NM_080385,NM_018718	chr7,chr7,chr7,chr7	+,+,+,-	CPA5,CPA5,CPA5,TSGA14	-5006,-5006,-5006,90167
chr22:32752870-32753499	chr22	+	32753088	32753164	True	NM_006604,NR_001450,NM_001098535	chr22,chr22,chr22	+,-,+	RFPL3,RFPL3S,RFPL3	-2267,13858,689
chrY:532634-534578	chrY	+	532721	534493	True	NM_006883,NM_000451,NM_013239	chrY,chrY,chrY	+,+,-	SHOX,SHOX,PPP2R3B	585,585,-235031
chrY:532634-534578	chrX	+	582721	584493	False	NM_006883,NM_000451,NM_013239	chrX,chrX,chrX	+,+,-	SHOX,SHOX,PPP2R3B	585,585,-235031
chr19:50525905-50527077	chr19	+	50526087	50527108	True	NM_001025778,NM_001006656,NM_016440,NM_015428	chr19,chr19,chr19,chr19	-,+,-,+	VRK3,ZNF473,VRK3,ZNF473	1747,2103,1747,2103
chr15:78187367-78188800	chr15	+	78187634	78188582	True	NM_001101404,NR_027024	chr15,chr15	+,-	SH2D7,LOC645752	196344,30656
chr10:21815189-21815502	chr10	+	21815208	21815460	True	NM_004641,NM_001195628,NM_001195630,NM_207371,NM_001195626,NM_001195627	chr10,chr10,chr10,chr10,chr10,chr10	+,+,+,-,+,+	MLLT10,MLLT10,MLLT10,C10orf140,MLLT10,MLLT10	7640,7640,7640,-597,8113,7640
chr11:72354622-72354837	chr11	+	72354757	72354829	True	NM_033388,NR_026572,NM_001143839	chr11,chr11,chr11	+,-,-	ATG16L2,PDE2A,PDE2A	170621,-1270,-1253
chr12:120555454-120555677	chr12	+	120555459	120555634	True	NM_006861,NM_207311,NM_001167606	chr12,chr12,chr12	-,+,-	RAB35,CCDC64,RAB35	-816,-127862,-816
chr12:113856353-113857728	chr12	+	113856582	113857362	True	NM_138432,NM_006843	chr12,chr12	+,-	SDSL,SDS	2853,-14890
chr22:39374059-39374719	chr22	+	39374574	39374738	True	NM_014292,NM_004900	chr22,chr22	-,+	CBX6,APOBEC3B	-106316,3666
chr13:41640592-41641215	chr13	+	41640666	41641121	True	NM_172373,NM_007187	chr13,chr13	-,+	ELF1,WBP4	-47158,-5032
chr14:66988251-66989081	chr14	+	66988315	66989101	True	NM_015994,NM_020806	chr14,chr14	-,+	ATP6V1D,GPHN	837675,-14241
chr20:62328584-62329310	chr20	+	62328600	62329234	True	NM_001134758,NM_001083113,NM_003823	chr20,chr20,chr20	-,+,+	ARFRP1,ZGPAT,TNFRSF6B	10171,9559,-647
chr7:134211437-134211985	chr7	+	134211501	134211691	True	NM_001628,NM_020299	chr7,chr7	-,+	AKR1B1,AKR1B10	-67613,652
chr7:134211437-134211985	chr7	+	134246554	134246604	False	NM_001628,NM_001080538	chr7,chr7	-,+	AKR1B1,AKR1B15	-102666,-12756
chr16:28507804-28508609	chr16	+	28507891	28508629	True	NM_145659,NM_001042432,NM_018690,NM_000086	chr16,chr16,chr16,chr16	-,-,+,-	IL27,CLN3,APOBR,CLN3	9576,-4268,-1949,-4488
chr9:133970346-133970939	chr9	+	133970401	133970641	True	NM_001185095,NM_001185096,NM_031426,NM_001145106,NR_033701	chr9,chr9,chr9,chr9,chr9	+,+,+,-,+	AIF1L,AIF1L,AIF1L,FIBCD1,AIF1L	1221,1221,1221,-155946,1221
chr20:62340843-62341303	chr20	+	62340949	62341021	True	NM_032527,NM_003224,NM_001195653,NM_001195654,NM_181485,NM_001083113,NM_001134758	chr20,chr20,chr20,chr20,chr20,chr20,chr20	+,-,+,+,+,+,-	ZGPAT,ARFRP1,ZGPAT,ZGPAT,ZGPAT,ZGPAT,ARFRP1	-1620,-1594,-1620,-1620,-1620,-2206,-1594
chr7:66350950-66351948	chr7	+	66350977	66351989	True	NR_003934,NM_017994	chr7,chr7	-,+	LOC729156,C7orf42	-41164,34213
chr20:43149525-43150227	chr20	+	43149626	43150220	True	NM_198941,NM_007066,NM_006811	chr20,chr20,chr20	-,+,-	SERINC3,PKIG,SERINC3	556,10215,556
chr3:53381085-53381374	chr3	+	53381084	53381406	True	NM_018403,NM_000720	chr3,chr3	-,+	DCP1A,CACNA1D	298,147624
chr2:34184446-34185935	chr2	+	34184811	34185923	True	NM_015376,NR_003143	chr2,chr2	+,-	RASGRP3,MYADML	-445921,-231527
chr9:127530432-127531862	chr9	+	127530780	127531898	True	NM_001489,NM_033334,NM_182487	chr9,chr9,chr9	-,-,+	NR6A1,NR6A1,OLFML2A	1734,1734,7538
chr5:131395908-131396287	chr5	+	131396096	131396258	True	NM_000588,NM_001205250	chr5,chr5	+,-	IL3,ACSL6	88,-48335
chr19:6394605-6395347	chr19	+	6394793	6395257	True	NM_002096,NM_032306	chr19,chr19	-,+	GTF2F1,ALKBH7	-1502,-22400
chr15:23208121-23208331	chr15	+	23208189	23208271	True	NR_024074,NR_003521	chr15,chr15	+,-	GOLGA8IP,WHAMML1	46970,136
chr7:56120577-56121301	chr7	+	56120793	56121155	True	NM_001762,NM_004577,NR_002957,NM_001009186	chr7,chr7,chr7,chr7	+,-,+,+	CCT6A,PSPH,SNORA15,CCT6A	-1466,-1525,7007,-1466
chr2:185526422-185528074	chr2	+	185526491	185528101	True	NM_194250,NM_205842	chr2,chr2	+,-	ZNF804A,NCKAP1	-63463,-1623262
chr18:13028099-13028677	chr18	+	13028154	13028448	True	NM_002828,NM_032142	chr18,chr18	-,+	PTPN2,CEP192	-143820,-36845
chr2:220300223-220301347	chr2	+	220300428	220301180	True	NM_012100,NM_005876	chr2,chr2	-,+	DNPEP,SPEG	-47766,-781
chr19:4126689-4127489	chr19	+	4126815	4127353	True	NM_030662,NM_032607	chr19,chr19	-,+	MAP2K2,CREB3L3	-2689,26275
chr1:187263602-187265521	chr1	+	187264099	187265356	True	NM_000963,NM_024420	chr1,chr1	-,+	PTGS2,PLA2G4A	-614540,-466128
chr15:54269547-54270585	chr15	+	54269585	54270405	True	NM_182758,NM_001080534	chr15,chr15	-,+	WDR72,UNC13C	-217726,34695
chr16:67363743-67364623	chr16	+	67363848	67364465	True	NM_018296,NM_001100915	chr16,chr16	+,-	LRRC36,KCTD19	-3164,-3187
chr3:6916090-6917674	chr3	+	6916125	6917669	True	NR_033378,NM_181874	chr3,chr3	-,+	LOC100288428,GRM7	1625725,-13378
chr7:6686672-6687160	chr7	+	6686675	6687153	True	NM_017560,NM_006956	chr7,chr7	+,-	ZNF853,ZNF12	-31199,59463
chr20:61436075-61436302	chr20	+	61436244	61436328	True	NM_007346,NM_018270,NM_006602	chr20,chr20,chr20	+,+,-	OGFR,C20orf20,TCFL5	-118,-8490,56837
chr5:79863412-79863698	chr5	+	79863489	79863739	True	NM_205548,NM_001004441	chr5,chr5	+,-	FAM151B,ANKRD34B	-79741,2615
chr1:184027012-184028795	chr1	+	184027012	184028670	True	NM_052965,NR_023349,NM_015101,NM_001127394	chr1,chr1,chr1,chr1	+,+,-,+	TSEN15,TSEN15,GLT25D2,TSEN15	-6260,-6260,-20149,-6260
chr7:44833553-44835018	chr7	+	44833564	44834683	True	NM_138635,NM_021130	chr7,chr7	-,+	H2AFV,PPIA	53099,1557
chr7:100728973-100729696	chr7	+	100729098	100729346	True	NM_003378,NM_030961	chr7,chr7	-,+	VGF,TRIM56	79556,-363
chr6:160675708-160676100	chr6	+	160675714	160675994	True	NM_003058,NM_021977	chr6,chr6	-,+	SLC22A2,SLC22A3	4019,93430
chr2:241500782-241501024	chr2	+	241500906	241501069	True	NM_016552,NM_017844,NM_001033575,NM_018226	chr2,chr2,chr2,chr2	-,-,+,+	ANKMY1,ANKMY1,DUSP28,RNPEPL1	-3501,-3501,-1486,6934
chr18:48559650-48560190	chr18	+	48559985	48560207	True	NM_005359,NM_016626	chr18,chr18	+,-	SMAD4,MEX3C	-3475,163898
chr2:74739661-74740392	chr2	+	74739905	74740331	True	NM_016170,NM_001009812,NM_032673	chr2,chr2,chr2	+,-,-	TLX2,LBX2,PCGF1	1264,-9462,-5084
chr7:26314747-26316199	chr7	+	26315149	26316179	True	NM_031243,NM_001199835	chr7,chr7	-,+	HNRNPA2B1,SNX10	-74736,15335
chr3:128228018-128228506	chr3	+	128228120	128228516	True	NR_026954,NM_032638	chr3,chr3	+,-	LOC90246,GATA2	-1493,-16090
chr2:99860695-99861293	chr2	+	99860747	99861298	True	NR_028356,NM_175735	chr2,chr2	+,-	MRPL30,LYG2	-63262,10323
chr17:67271143-67272781	chr17	+	67271353	67272045	True	NM_080282,NM_002758	chr17,chr17	-,+	ABCA10,MAP2K6	-30397,138792
chr17:42837396-42838036	chr17	+	42837482	42838058	True	NM_005497,NM_002390	chr17,chr17	-,+	GJC1,ADAM11	69599,-965
chr11:60051918-60053087	chr11	+	60051954	60052604	True	NM_148975,NM_024021,NM_022349	chr11,chr11,chr11	+,+,-	MS4A4A,MS4A4A,MS4A6A	-3873,-1926,-101280
chr19:41950473-41951327	chr19	+	41950508	41951163	True	NM_001167869,NM_001167868,NM_018035,NM_001167870,NM_001167871,NM_001167867,NM_001130514,NR_030765	chr19,chr19,chr19,chr19,chr19,chr19,chr19,chr19	-,-,-,-,-,-,+,-	ATP5SL,ATP5SL,ATP5SL,ATP5SL,ATP5SL,ATP5SL,C19orf69,ATP5SL	-4665,-5027,-4665,-4665,-4665,-5027,-1506,-4665
chr2:100924551-100926293	chr2	+	100924820	100926012	True	NM_198461,NM_001011717	chr2,chr2	-,+	LONRF2,NMS	13245,160931
chr7:75827290-75827721	chr7	+	75827389	75827717	True	NM_001110199,NM_016086	chr7,chr7	+,-	SRRM3,STYXL1	3498,-150068
chr15:49432341-49433615	chr15	+	49432489	49433394	True	NM_001001556,NM_001143887	chr15,chr15	+,-	GALK2,COPS2	14581,14519
chr13:51490850-51492566	chr13	+	51490849	51492219	True	NM_001142279,NM_024570,NM_198989	chr13,chr13,chr13	+,+,-	RNASEH2B,RNASEH2B,DLEU7	-7086,-7086,-72964
chr12:62996971-62997234	chr12	+	62997018	62997250	True	NM_175895,NR_029661	chr12,chr12	-,+	C12orf61,MIRLET7I	14,215
chr2:231191643-231191891	chr2	+	231191762	231191900	True	NM_138402,NM_001185015	chr2,chr2	+,-	SP140L,SP110	1,-101318
chr13:50016795-50018027	chr13	+	50017057	50017743	True	NM_031915,NM_001079670,NM_001160308	chr13,chr13,chr13	+,-,+	SETDB2,CAB39L,SETDB2	685,528,7944
chr12:122231287-122231493	chr12	+	122231421	122231489	True	NM_015048,NM_019034,NR_002809	chr12,chr12,chr12	+,-,-	SETD1B,RHOF,LOC338799	11148,155,9951
chrX:63424086-63424323	chrX	+	63424145	63424315	True	NM_152424,NM_001010888	chrX,chrX	-,+	FAM123B,ZC3H12B	1359,1284299
chr14:95026589-95027528	chr14	+	95026611	95027395	True	NM_006215,NM_173850	chr14,chr14	+,-	SERPINA4,SERPINA12	387,-42430
chrX:13772259-13774164	chrX	+	13772476	13773739	True	NM_014563,NM_003611	chrX,chrX	-,+	TRAPPC2,OFD1	-19722,-19695
chr1:1409340-1409729	chr1	+	1409391	1409453	True	NR_026871,NM_031921	chr1,chr1	-,+	LOC441869,ATAD3B	-52741,-2278
chr2:68383201-68384368	chr2	+	68383479	68384271	True	NM_138458,NM_020143	chr2,chr2	-,+	WDR92,PNO1	435,733
chr10:114137017-114138882	chr10	+	114137421	114138861	True	NR_028134,NM_203380,NM_203379,NM_016234	chr10,chr10,chr10,chr10	-,+,+,+	GUCY2GP,ACSL5,ACSL5,ACSL5	-21068,-2460,-3567,-1527
chr17:77477266-77478032	chr17	+	77477282	77478010	True	NM_178543,NM_001082575	chr17,chr17	+,-	ENPP7,RBFOX3	226871,603
chr7:55766947-55767618	chr7	+	55767026	55767503	True	NM_182633,NR_027339,NR_003949	chr7,chr7,chr7	+,-,-	ZNF713,FKBP9L,FKBP9L	212827,-9873,4814
chr21:47875687-47876792	chr21	+	47875738	47876776	True	NM_206889,NM_001146114,NM_001146115,NM_001146116,NM_206890,NM_206891,NM_015151,NM_058180	chr21,chr21,chr21,chr21,chr21,chr21,chr21,chr21	+,+,+,+,+,+,+,-	DIP2A,DIP2A,DIP2A,DIP2A,DIP2A,DIP2A,DIP2A,C21orf58	2085,2085,2085,2085,2085,2085,2085,-131953
chr11:630975-631744	chr11	+	630995	631155	True	NM_031264,NM_021924,NM_001171968,NM_000797,NM_021920	chr11,chr11,chr11,chr11,chr11	-,-,-,+,-	CDHR5,CDHR5,CDHR5,DRD4,SCT	-5928,-5928,-5928,6149,-3822
chr3:38349020-38350277	chr3	+	38349099	38350171	True	NM_004803,NR_028389	chr3,chr3	+,-	SLC22A14,LOC100128640	-1705,146190
chr6:168196396-168196672	chr6	+	168196494	168196616	True	NR_026773,NM_001040000	chr6,chr6	-,+	C6orf123,MLLT4	973,31054
chr1:65434057-65434537	chr1	+	65434061	65434197	True	NM_203464,NM_002227	chr1,chr1	+,-	AK4,JAK1	179034,-1874
chr3:11301391-11301697	chr3	+	11301508	11301730	True	NM_000861,NM_001128221	chr3,chr3	+,-	HRH1,VGLL4	-7174,308718
chr7:73134201-73134597	chr7	+	73134378	73134626	True	NM_004603,NR_036247,NM_001165903	chr7,chr7,chr7	-,+,-	STX1A,MIR4284,STX1A	-361,-8782,-361
chr13:111817691-111818847	chr13	+	111817743	111818832	True	NM_017664,NM_003899	chr13,chr13	-,+	ANKRD10,ARHGEF7	-250327,-11733
chr6:43539516-43541424	chr6	+	43540164	43541240	True	NM_020750,NM_006502	chr6,chr6	-,+	XPO5,POLH	2622,2637
chr2:242255196-242255409	chr2	+	242255351	242255419	True	NM_005336,NM_006155,NM_001008491,NM_001008492,NM_004404	chr2,chr2,chr2,chr2,chr2	-,+,+,+,+	HDLBP,SEPT2,SEPT2,SEPT2,SEPT2	-97,-679,-679,-121,-121
chr6:119213979-119214952	chr6	+	119214036	119214997	True	NM_017696,NM_014034	chr6,chr6	-,+	MCM9,ASF1A	37964,243
chr2:96804245-96804449	chr2	+	96804261	96804497	True	NM_004418,NM_001037228,NM_001002036	chr2,chr2,chr2	-,+,-	DUSP2,LOC285033,ASTL	6732,101479,-86
chr15:34828949-34830589	chr15	+	34829108	34830385	True	NR_036050,NM_175741,NM_001023567,NR_036261	chr15,chr15,chr15,chr15	-,+,-,-	MIR1233-1,C15orf55,GOLGA8B,MIR1233-2	-8536,-191094,-886,-8536
chr15:34828949-34830589	chr15	+	34682887	34684164	False	NM_175741,NR_036050,NM_181077,NR_036261	chr15,chr15,chr15,chr15	+,-,-,-	C15orf55,MIR1233-1,GOLGA8A,MIR1233-2	-44873,-8536,-886,-8536
chr2:73933207-73935158	chr2	+	73933352	73934685	True	NM_016347,NR_003683	chr2,chr2	-,+	NAT8B,ALMS1P	-4885,-61357
chr1:219663177-219664746	chr1	+	219663335	219664763	True	NM_138794,NM_018713	chr1,chr1	+,-	LYPLAL1,SLC30A10	-316202,437280
chr18:14484983-14486229	chr18	+	14485627	14485692	True	NR_024076,NR_026756	chr18,chr18	-,+	CXADRP3,LOC284233	13066,-148262
chr18:14484983-14486229	chr21	-	15039994	15044792	False	NR_026755,NM_174981	chr21,chr21	-,+	C21orf15,POTED	180688,-62291
chr2:222827734-222828952	chr5	-	137892263	137892499	True	NM_001964,NR_002913	chr5,chr5	+,-	EGR1,SNORD63	-91319,4536
chr11:1073523-1073753	chr11	+	1073543	1073801	True	NM_002457,NM_005961	chr11,chr11	+,-	MUC2,MUC6	1073,-36837
chr17:41835964-41836259	chr17	+	41836038	41836190	True	NM_025237,NM_001136483	chr17,chr17	-,+	SOST,C17orf105	16,21612
chr5:1204932-1205513	chr5	+	1204950	1205467	True	NM_001003841,NM_001193376	chr5,chr5	+,-	SLC6A19,TERT	-3298,89752
chr10:70881424-70882719	chr10	+	70881495	70882120	True	NM_001057,NM_001035260,NM_004896	chr10,chr10,chr10	-,+,+	TACR2,VPS26A,VPS26A	294604,1787,1787
chr17:43512494-43512967	chr17_ctg5_hap1	+	127652	128068	False	NM_001113738,NM_174919,NM_199282	chr17_ctg5_hap1,chr17_ctg5_hap1,chr17_ctg5_hap1	+,-,-	ARL17A,ARHGAP27,ARHGAP27	67652,-2245,-9516
chr17:43512494-43512967	chr17	+	43512590	43513006	True	NR_024435,NM_174919,NM_199282	chr17,chr17,chr17	+,-,-	LOC100133991,ARHGAP27,ARHGAP27	-173083,-2308,-9578
chr3:179322822-179323670	chr3	+	179322956	179323586	True	NM_001199958,NM_002492,NM_177988,NM_020409,NM_001199957	chr3,chr3,chr3,chr3,chr3	+,+,-,-,+	NDUFB5,NDUFB5,MRPL47,MRPL47,NDUFB5	-445,-445,-522,-522,-445
chr1:155534004-155534766	chr1	+	155534301	155534611	True	NR_027023,NM_018489	chr1,chr1	+,-	LOC645676,ASH1L	-2582,-1977
chr1:109235688-109236500	chr1	+	109235819	109236410	True	NR_037185,NM_018061,NM_144584	chr1,chr1,chr1	+,+,-	PRPF38B,PRPF38B,HENMT1	-935,-938,-31671
chr16:55910986-55912286	chr16	+	55910999	55912212	True	NM_145024,NR_003276,NM_001143685	chr16,chr16,chr16	-,+,-	CES5A,CES1P1,CES5A	-1717,-116539,-1717
chr9:134151461-134151910	chr9	+	134151477	134151928	True	NM_032728,NM_033387	chr9,chr9	+,-	PPAPDC3,FAM78A	13152,28
chr14:93814166-93815450	chr14	+	93814239	93814956	True	NM_018167,NM_182971	chr14,chr14	-,+	BTBD7,COX8C	-14854,-753
chr11:109963377-109963684	chr11	+	109963502	109963730	True	NM_033390,NM_002906	chr11,chr11	+,-	ZC3H12C,RDX	356,203757
chr11:111740778-111741977	chr11	+	111740936	111741946	True	NM_138378,NM_001077690,NM_001077691,NM_024740,NM_022761,NM_001077692	chr11,chr11,chr11,chr11,chr11,chr11	-,-,-,-,+,-	FDXACB1,ALG9,ALG9,ALG9,C11orf1,ALG9	8257,409,108,409,8001,108
chr22:42978828-42979886	chr22	+	42979037	42979927	True	NR_002184,NM_014509	chr22,chr22	-,+	RRP7B,SERHL2	-1020,-29163
chr22:17681504-17683308	chr22	+	17681831	17682729	True	NM_177405,NM_017424,NR_024483	chr22,chr22,chr22	-,-,+	CECR1,CECR1,CECR4	-1286,8100,-41603
chr1:24969153-24969589	chr1	+	24969254	24969512	True	NM_005839,NM_001199012	chr1,chr1	+,-	SRRM1,C1orf201	81,-227667
chr11:68228954-68229848	chr11	+	68229082	68229878	True	NM_018312,NM_001164164,NM_001164161,NM_001164160,NM_001164163,NM_001164162,NM_022338	chr11,chr11,chr11,chr11,chr11,chr11,chr11	+,+,+,+,+,+,-	PPP6R3,PPP6R3,PPP6R3,PPP6R3,PPP6R3,PPP6R3,C11orf24	-947,-947,-947,-947,-947,-947,-189613
chr20:3828079-3829039	chr20	+	3828097	3829087	True	NM_001810,NM_020746,NR_037922,NR_037921	chr20,chr20,chr20,chr20	-,+,+,+	CENPB,MAVS,MAVS,MAVS	-60760,-702,-702,-702
chr4:71854992-71856058	chr4	+	71855324	71855906	True	NM_002092,NM_000788	chr4,chr4	-,+	GRSF1,DCK	-149697,3358
chr11:22365213-22366674	chr11	+	22365685	22366200	True	NM_020346,NM_022725	chr11,chr11	+,-	SLC17A6,FANCF	-6072,281244
chr19:15307095-15308088	chr19	+	15307246	15308118	True	NM_033025,NM_000435	chr19,chr19	+,-	SYDE1,NOTCH3	-89088,3724
chrX:150868313-150869162	chrX	+	150868343	150869129	True	NR_029973,NR_033262,NM_024082	chrX,chrX,chrX	-,+,+	MIR452,PRRG3,PRRG3	259105,-1615,-4664
chr5:134074467-134074682	chr5	+	134074501	134074609	True	NM_001745,NM_016103	chr5,chr5	+,-	CAMLG,SAR1B	-382,-105968
chr16:23764820-23765287	chr16	+	23765107	23765286	True	NM_033266,NM_022097	chr16,chr16	-,+	ERN2,CHP2	-40286,661
chr22:30277045-30277389	chr22	+	30277045	30277116	True	NM_021090,NM_153051,NM_153050,NM_032204	chr22,chr22,chr22,chr22	+,+,+,-	MTMR3,MTMR3,MTMR3,ASCC2	2041,2041,2041,-42791
chr12:53646690-53647299	chr12	+	53646721	53647101	True	NM_001170790,NM_032889,NM_000966	chr12,chr12,chr12	+,+,-	MFSD5,MFSD5,RARG	-1402,-896,-20685
chr11:62183399-62184175	chr11	+	62183572	62184202	True	NM_003357,NM_206998	chr11,chr11	+,-	SCGB1A1,SCGB1D4	2304,-117036
chr16:13335091-13336393	chr16	+	13335392	13336342	True	NM_001145204,NM_018340	chr16,chr16	+,-	SHISA9,CPPED1	-339966,-437648
chr4:170161029-170162101	chr4	+	170161208	170162042	True	NM_020870,NM_001829	chr4,chr4	-,+	SH3RF1,CLCN3	30261,379679
chr4:89400290-89400938	chr4	+	89400486	89400772	True	NM_016323,NM_001042616	chr4,chr4	+,-	HERC5,PIGY	-22270,44243
chr16:30582313-30582715	chr16	+	30582453	30582705	True	NM_001024683,NM_145271,NM_024031	chr16,chr16,chr16	-,-,+	ZNF688,ZNF688,PRR14	1073,1073,79535
chr18:61033234-61033772	chr18	+	61033255	61033651	True	NM_002035,NM_002639	chr18,chr18	-,+	KDSR,SERPINB5	905,110492
chr17:15166499-15168097	chr17	+	15166542	15167968	True	NM_000304,NR_033371,NM_153321,NM_153322	chr17,chr17,chr17,chr17	-,+,-,-	PMP22,CDRT7,PMP22,PMP22	729,-232301,-653,-2449
chr7:100728666-100728973	chr7	+	100728706	100728771	True	NM_003378,NM_030961	chr7,chr7	-,+	VGF,TRIM56	80132,14
chr12:56863066-56863276	chr12	+	56863066	56863276	True	NM_012064,NM_207344	chr12,chr12	-,+	MIP,SPRYD4	-14631,-816
chr10:124607339-124607608	chr10	+	124607342	124607590	True	NR_037912,NR_027282,NM_022034	chr10,chr10,chr10	-,+,-	CUZD1,LOC399815,CUZD1	-1651,31558,-1651
chr16:23314009-23314339	chr16	+	23314066	23314292	True	NM_153603,NM_000336	chr16,chr16	-,+	COG7,SCNN1B	150270,-527
chr8:143958079-143958337	chr8	+	143958080	143958248	True	NM_001026213,NM_002066,NM_000497	chr8,chr8,chr8	-,+,-	CYP11B1,GML,CYP11B1	3038,-41914,3038
chr8:143958079-143958337	chr8	+	143996103	143996271	False	NM_000498,NM_002066	chr8,chr8	-,+	CYP11B2,GML	3038,-79937
chr11:60872129-60873316	chr11	+	60872133	60873303	True	NM_017966,NM_014207	chr11,chr11	-,+	VPS37C,CD5	55665,-2254
chr7:134330441-134330836	chr7	+	134330443	134330853	True	NM_001628,NM_001724,NM_199186	chr7,chr7,chr7	-,+,+	AKR1B1,BPGM,BPGM	-186555,677,677
chr1:40368196-40369571	chr1	+	40368445	40369412	True	NM_001033081,NM_001033082,NM_005376,NM_001136493	chr1,chr1,chr1,chr1	-,-,-,+	MYCL1,MYCL1,MYCL1,MFSD2A	-758,-758,-758,51371
chr18:42262313-42262895	chr18	+	42262394	42262829	True	NM_015559,NM_001130110,NR_036203	chr18,chr18,chr18	+,+,-	SETBP1,SETBP1,MIR4319	-1582,-2307,287352
chr17:26573975-26574397	chr17	+	26573980	26574402	True	NR_002181,NR_028334	chr17,chr17	+,-	PPY2,FLJ40504	67,60056
chr6:122794178-122795245	chr6	+	122794309	122794956	True	NM_020755,NM_181794	chr6,chr6	-,+	SERINC1,PKIB	-1357,-1305
chr1:227058923-227059541	chr1	+	227059208	227059494	True	NM_002221,NM_012486,NM_000447	chr1,chr1,chr1	-,+,+	ITPKB,PSEN2,PSEN2	-132332,-992,-992
chr1:33933149-33934208	chr1	+	33933212	33934136	True	NM_145238,NM_198040	chr1,chr1	+,-	ZSCAN20,PHC2	4095,-92018
chr22:36223280-36225020	chr22	+	36223511	36224669	True	NM_030642,NM_001031695	chr22,chr22	+,-	APOL5,RBFOX2	-109651,12011
chr18:33069196-33070168	chr18	+	33069635	33070129	True	NM_001098817,NM_020474,NM_194281	chr18,chr18,chr18	-,+,-	INO80C,GALNT1,INO80C	7876,164403,7876
chr2:160456301-160456751	chr2	+	160456508	160456763	True	NM_013450,NM_022826	chr2,chr2	-,+	BAZ2B,MARCH7	16347,112246
chr22:46452375-46453260	chr22	+	46452444	46453216	True	NM_018280,NR_027034	chr22,chr22	-,+	C22orf26,LOC150381	-2420,-2769
chr11:1619442-1619954	chr11	+	1619581	1619978	True	NM_001012708,NR_021489,NM_001004325	chr11,chr11,chr11	-,+,-	KRTAP5-3,LOC338651,KRTAP5-2	9765,-25661,-57
chr3:50370145-50370641	chr3	+	50370537	50370617	True	NM_007275,NM_007022,NM_170712,NM_170713,NM_007182,NM_170714	chr3,chr3,chr3,chr3,chr3,chr3	-,+,-,-,-,-	TUSC2,CYB561D2,RASSF1,RASSF1,RASSF1,RASSF1	-4869,17679,5097,4328,7800,7800
chr21:18886759-18887110	chr21	+	18886759	18886959	True	NM_001130914,NM_001338	chr21,chr21	-,+	BTG3,CXADR	98364,-1480
chr15:92829929-92831418	chr15	+	92830535	92831339	True	NM_006011,NR_021493	chr15,chr15	+,-	ST8SIA2,LOC100144604	105800,284204
chr22:36016547-36017484	chr22	+	36016707	36017524	True	NM_203377,NM_030641,NM_203378,NM_005368	chr22,chr22,chr22,chr22	-,+,-,-	MB,APOL6,MB,MB	1928,26899,-3152,-3323
chr5:170846127-170846366	chr5	+	170846150	170846306	True	NM_003862,NR_037474	chr5,chr5	+,-	FGF18,MIR3912	360,-32386
chrX:46617355-46617887	chrX	+	46617380	46617866	True	NM_032591,NM_006915	chrX,chrX	-,+	SLC9A7,RP2	656,78480
chr18:3410585-3411916	chr18	+	3411047	3411939	True	NM_019856,NM_174886	chr18,chr18	-,+	MYOM1,TGIF1	-190941,132
